BINCODE NAME IDENTIFIER DESCRIPTION TYPE '0' 'control genes' '' '' '1' 'PS' 'niben044scf00001478ctg011_22435-26842' '(at5g38660 : 218.0) mutant has Altered acclimation responses;; ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT (APE1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2854 (InterPro:IPR021275), Proteasome maturation factor UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana protein match is: Proteasome maturation factor UMP1 (TAIR:AT5G38650.1). & (gnl|cdd|38271 : 142.0) no description available & (gnl|cdd|68901 : 135.0) no description available & (reliability: 436.0) & (original description: Putative Sb08, Description = Putative uncharacterized protein Sb08, PFAM = PF05348)' T '1' 'PS' 'niben101scf02366_668334-677305' '(at5g38660 : 295.0) mutant has Altered acclimation responses;; ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT (APE1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2854 (InterPro:IPR021275), Proteasome maturation factor UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana protein match is: Proteasome maturation factor UMP1 (TAIR:AT5G38650.1). & (reliability: 590.0) & (original description: Putative APE1, Description = At5g38660, PFAM = PF11016)' T '1' 'PS' 'niben101scf02657_42745-51568' '(at5g38660 : 213.0) mutant has Altered acclimation responses;; ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT (APE1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2854 (InterPro:IPR021275), Proteasome maturation factor UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana protein match is: Proteasome maturation factor UMP1 (TAIR:AT5G38650.1). & (gnl|cdd|68901 : 140.0) no description available & (gnl|cdd|38271 : 138.0) no description available & (reliability: 426.0) & (original description: Putative Sb08, Description = Putative uncharacterized protein Sb08, PFAM = PF05348)' T '1' 'PS' 'niben101scf11232_31303-37047' '(at5g38660 : 220.0) mutant has Altered acclimation responses;; ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT (APE1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2854 (InterPro:IPR021275), Proteasome maturation factor UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana protein match is: Proteasome maturation factor UMP1 (TAIR:AT5G38650.1). & (gnl|cdd|38271 : 144.0) no description available & (gnl|cdd|68901 : 138.0) no description available & (reliability: 440.0) & (original description: Putative Sb08, Description = Putative uncharacterized protein Sb08, PFAM = PF05348)' T '1.1' 'PS.lightreaction' '' '' '1.1.1' 'PS.lightreaction.photosystem II' '' '' '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'nbv0.3scaffold12402_39151-43394' '(at3g08940 : 464.0) Lhcb4.2 protein (Lhcb4.2, protein involved in the light harvesting complex of photosystem II; light harvesting complex photosystem II (LHCB4.2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT5G01530.1); Has 2312 Blast hits to 2241 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 1976; Viruses - 0; Other Eukaryotes - 332 (source: NCBI BLink). & (q93wd2|cb29_chlre : 240.0) Chlorophyll a-b binding protein CP29 - Chlamydomonas reinhardtii & (gnl|cdd|84819 : 167.0) no description available & (reliability: 928.0) & (original description: Putative cab, Description = Chlorophyll a-b binding protein, chloroplastic, PFAM = PF00504)' T '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'nbv0.5scaffold2832_170243-177028' '(at1g76570 : 243.0) Chlorophyll A-B binding family protein; FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem II light harvesting complex gene 2.3 (TAIR:AT3G27690.1); Has 2289 Blast hits to 2229 proteins in 217 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1997; Viruses - 0; Other Eukaryotes - 289 (source: NCBI BLink). & (p20866|cb2_phypa : 125.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCII type I CAB) (LHCP) - Physcomitrella patens (Moss) & (gnl|cdd|84819 : 84.2) no description available & (reliability: 486.0) & (original description: Putative CAB1, Description = Chlorophyll a-b binding protein, chloroplastic, PFAM = PF00504)' T '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben044scf00000987ctg002_1036-3639' '(p27492|cb21_tobac : 506.0) Chlorophyll a-b binding protein 16, chloroplast precursor (LHCII type I CAB-16) (LHCP) - Nicotiana tabacum (Common tobacco) & (at1g29930 : 451.0) Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.; chlorophyll A/B binding protein 1 (CAB1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: guard cell, juvenile leaf, cultured cell; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 3 (TAIR:AT1G29910.1); Has 2419 Blast hits to 2339 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|84819 : 182.0) no description available & (reliability: 902.0) & (original description: Putative CABE, Description = Chlorophyll a-b binding protein E, chloroplastic, PFAM = PF00504)' T '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben044scf00003625ctg018_686-3069' '(p27495|cb24_tobac : 253.0) Chlorophyll a-b binding protein 40, chloroplast precursor (LHCII type I CAB-40) (LHCP) - Nicotiana tabacum (Common tobacco) & (at3g27690 : 233.0) Encodes Lhcb2.4. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus.; photosystem II light harvesting complex gene 2.3 (LHCB2.3); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast envelope; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem II light harvesting complex gene 2.1 (TAIR:AT2G05100.1); Has 2373 Blast hits to 2310 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2058; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink). & (gnl|cdd|84819 : 92.3) no description available & (reliability: 466.0) & (original description: Putative cab1, Description = Chlorophyll a-b binding protein, chloroplastic, PFAM = PF00504)' T '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben044scf00008488ctg013_455-4778' '(at4g10340 : 388.0) photosystem II encoding the light-harvesting chlorophyll a/b binding protein CP26 of the antenna system of the photosynthetic apparatus; light harvesting complex of photosystem II 5 (LHCB5); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis, nonphotochemical quenching; LOCATED IN: in 9 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 1 (TAIR:AT1G29930.1); Has 2360 Blast hits to 2295 proteins in 226 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2013; Viruses - 0; Other Eukaryotes - 343 (source: NCBI BLink). & (p15194|cb2b_pinsy : 191.0) Chlorophyll a-b binding protein type 2 member 1B, chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) - Pinus sylvestris (Scots pine) & (gnl|cdd|84819 : 160.0) no description available & (reliability: 776.0) & (original description: Putative LHCB5, Description = Chlorophyll a-b binding protein CP26, chloroplastic, PFAM = PF00504)' T '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben044scf00014092ctg004_9468-12337' '(at5g54270 : 457.0) Lhcb3 protein is a component of the main light harvesting chlorophyll a/b-protein complex of Photosystem II (LHC II).; light-harvesting chlorophyll B-binding protein 3 (LHCB3); FUNCTIONS IN: structural molecule activity; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem II light harvesting complex gene 2.1 (TAIR:AT2G05100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p27523|cb23_horvu : 439.0) Chlorophyll a-b binding protein of LHCII type III, chloroplast precursor (CAB) - Hordeum vulgare (Barley) & (gnl|cdd|84819 : 181.0) no description available & (reliability: 914.0) & (original description: Putative CAB13, Description = Chlorophyll a-b binding protein 13, chloroplastic, PFAM = PF00504)' T '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben044scf00014580ctg014_7458-10386' '(p27493|cb22_tobac : 506.0) Chlorophyll a-b binding protein 21, chloroplast precursor (LHCII type I CAB-21) (LHCP) - Nicotiana tabacum (Common tobacco) & (at1g29930 : 459.0) Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.; chlorophyll A/B binding protein 1 (CAB1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: guard cell, juvenile leaf, cultured cell; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 3 (TAIR:AT1G29910.1); Has 2419 Blast hits to 2339 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|84819 : 182.0) no description available & (reliability: 918.0) & (original description: Putative CAB1B, Description = Chlorophyll a-b binding protein 1B, chloroplastic, PFAM = PF00504)' T '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben044scf00017935ctg003_4021-8607' '(at3g08940 : 449.0) Lhcb4.2 protein (Lhcb4.2, protein involved in the light harvesting complex of photosystem II; light harvesting complex photosystem II (LHCB4.2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT5G01530.1); Has 2312 Blast hits to 2241 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 1976; Viruses - 0; Other Eukaryotes - 332 (source: NCBI BLink). & (q93wd2|cb29_chlre : 242.0) Chlorophyll a-b binding protein CP29 - Chlamydomonas reinhardtii & (gnl|cdd|84819 : 167.0) no description available & (reliability: 898.0) & (original description: Putative cab, Description = Chlorophyll a-b binding protein, chloroplastic, PFAM = PF00504)' T '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben044scf00046604ctg005_10806-13606' '(p27496|cb25_tobac : 509.0) Chlorophyll a-b binding protein 50, chloroplast precursor (LHCII type I CAB-50) (LHCP) - Nicotiana tabacum (Common tobacco) & (at1g29930 : 459.0) Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.; chlorophyll A/B binding protein 1 (CAB1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: guard cell, juvenile leaf, cultured cell; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 3 (TAIR:AT1G29910.1); Has 2419 Blast hits to 2339 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|84819 : 183.0) no description available & (reliability: 918.0) & (original description: Putative CAB3C, Description = Chlorophyll a-b binding protein 3C, chloroplastic, PFAM = PF00504)' T '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101ctg16374_5244-8044' '(p27496|cb25_tobac : 491.0) Chlorophyll a-b binding protein 50, chloroplast precursor (LHCII type I CAB-50) (LHCP) - Nicotiana tabacum (Common tobacco) & (at1g29930 : 442.0) Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.; chlorophyll A/B binding protein 1 (CAB1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: guard cell, juvenile leaf, cultured cell; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 3 (TAIR:AT1G29910.1); Has 2419 Blast hits to 2339 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|84819 : 184.0) no description available & (reliability: 884.0) & (original description: Putative CAB3C, Description = Chlorophyll a-b binding protein 3C, chloroplastic, PFAM = PF00504)' T '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf01548_42030-45185' '(p27494|cb23_tobac : 525.0) Chlorophyll a-b binding protein 36, chloroplast precursor (LHCII type I CAB-36) (LHCP) - Nicotiana tabacum (Common tobacco) & (at2g05100 : 481.0) Lhcb2.1 protein encoding a subunit of the light harvesting complex II. Member of a gene family with high degree of sequence similarity. Initially LHCB2.3 was considered as a separate gene but appears to be an allele of LHCB2.1.; photosystem II light harvesting complex gene 2.1 (LHCB2.1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to salt stress, response to blue light, response to red light, response to far red light, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 12 plant structures; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem II light harvesting complex gene 2.2 (TAIR:AT2G05070.1); Has 2375 Blast hits to 2314 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2059; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|84819 : 181.0) no description available & (reliability: 962.0) & (original description: Putative CAB4, Description = Chlorophyll a-b binding protein 4, chloroplastic, PFAM = PF00504)' T '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf01677_631831-634307' '(p27491|cb27_tobac : 307.0) Chlorophyll a-b binding protein 7, chloroplast precursor (LHCII type I CAB-7) (LHCP) - Nicotiana tabacum (Common tobacco) & (at1g29930 : 267.0) Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.; chlorophyll A/B binding protein 1 (CAB1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: guard cell, juvenile leaf, cultured cell; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 3 (TAIR:AT1G29910.1); Has 2419 Blast hits to 2339 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|84819 : 100.0) no description available & (reliability: 534.0) & (original description: Putative cab1, Description = Chlorophyll a-b binding protein, chloroplastic, PFAM = PF00504)' T '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf01677_632248-634631' '(p27491|cb27_tobac : 251.0) Chlorophyll a-b binding protein 7, chloroplast precursor (LHCII type I CAB-7) (LHCP) - Nicotiana tabacum (Common tobacco) & (at3g27690 : 232.0) Encodes Lhcb2.4. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus.; photosystem II light harvesting complex gene 2.3 (LHCB2.3); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast envelope; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem II light harvesting complex gene 2.1 (TAIR:AT2G05100.1); Has 2373 Blast hits to 2310 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2058; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink). & (gnl|cdd|84819 : 92.6) no description available & (reliability: 464.0) & (original description: Putative cab1, Description = Chlorophyll a-b binding protein, chloroplastic, PFAM = PF00504)' T '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf01785_974744-977538' '(p27493|cb22_tobac : 508.0) Chlorophyll a-b binding protein 21, chloroplast precursor (LHCII type I CAB-21) (LHCP) - Nicotiana tabacum (Common tobacco) & (at1g29930 : 461.0) Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.; chlorophyll A/B binding protein 1 (CAB1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: guard cell, juvenile leaf, cultured cell; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 3 (TAIR:AT1G29910.1); Has 2419 Blast hits to 2339 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|84819 : 182.0) no description available & (reliability: 922.0) & (original description: Putative CAB1B, Description = Chlorophyll a-b binding protein 1B, chloroplastic, PFAM = PF00504)' T '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf01785_986234-993789' '(p27493|cb22_tobac : 508.0) Chlorophyll a-b binding protein 21, chloroplast precursor (LHCII type I CAB-21) (LHCP) - Nicotiana tabacum (Common tobacco) & (at1g29930 : 461.0) Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.; chlorophyll A/B binding protein 1 (CAB1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: guard cell, juvenile leaf, cultured cell; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 3 (TAIR:AT1G29910.1); Has 2419 Blast hits to 2339 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|84819 : 181.0) no description available & (reliability: 922.0) & (original description: Putative CAB1B, Description = Chlorophyll a-b binding protein 1B, chloroplastic, PFAM = PF00504)' T '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf01987_39604-42187' '(p27494|cb23_tobac : 434.0) Chlorophyll a-b binding protein 36, chloroplast precursor (LHCII type I CAB-36) (LHCP) - Nicotiana tabacum (Common tobacco) & (at3g27690 : 410.0) Encodes Lhcb2.4. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus.; photosystem II light harvesting complex gene 2.3 (LHCB2.3); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast envelope; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem II light harvesting complex gene 2.1 (TAIR:AT2G05100.1); Has 2373 Blast hits to 2310 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2058; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink). & (gnl|cdd|84819 : 175.0) no description available & (reliability: 820.0) & (original description: Putative CAB5, Description = Chlorophyll a-b binding protein 5, chloroplastic, PFAM = PF00504)' T '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf02164_249040-256911' '(at1g76570 : 463.0) Chlorophyll A-B binding family protein; FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem II light harvesting complex gene 2.3 (TAIR:AT3G27690.1); Has 2289 Blast hits to 2229 proteins in 217 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1997; Viruses - 0; Other Eukaryotes - 289 (source: NCBI BLink). & (p27518|cb21_goshi : 195.0) Chlorophyll a-b binding protein 151, chloroplast precursor (LHCII type II CAB-151) (LHCP) - Gossypium hirsutum (Upland cotton) & (gnl|cdd|84819 : 132.0) no description available & (reliability: 926.0) & (original description: Putative AB80, Description = Chlorophyll a-b binding protein, chloroplastic, PFAM = PF00504)' T '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf02262_155637-158437' '(p27496|cb25_tobac : 511.0) Chlorophyll a-b binding protein 50, chloroplast precursor (LHCII type I CAB-50) (LHCP) - Nicotiana tabacum (Common tobacco) & (at1g29930 : 457.0) Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.; chlorophyll A/B binding protein 1 (CAB1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: guard cell, juvenile leaf, cultured cell; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 3 (TAIR:AT1G29910.1); Has 2419 Blast hits to 2339 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|84819 : 185.0) no description available & (reliability: 914.0) & (original description: Putative CAB3C, Description = Chlorophyll a-b binding protein 3C, chloroplastic, PFAM = PF00504)' T '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf02459_61294-66254' '(at4g10340 : 393.0) photosystem II encoding the light-harvesting chlorophyll a/b binding protein CP26 of the antenna system of the photosynthetic apparatus; light harvesting complex of photosystem II 5 (LHCB5); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis, nonphotochemical quenching; LOCATED IN: in 9 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 1 (TAIR:AT1G29930.1); Has 2360 Blast hits to 2295 proteins in 226 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2013; Viruses - 0; Other Eukaryotes - 343 (source: NCBI BLink). & (p15194|cb2b_pinsy : 192.0) Chlorophyll a-b binding protein type 2 member 1B, chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) - Pinus sylvestris (Scots pine) & (gnl|cdd|84819 : 160.0) no description available & (reliability: 786.0) & (original description: Putative LHCB5, Description = Chlorophyll a-b binding protein CP26, chloroplastic, PFAM = PF00504)' T '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf02513_757523-760433' '(at1g15820 : 386.0) Lhcb6 protein (Lhcb6), light harvesting complex of photosystem II.; light harvesting complex photosystem II subunit 6 (LHCB6); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, nonphotochemical quenching; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 6 (TAIR:AT1G19150.1); Has 2316 Blast hits to 2191 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1959; Viruses - 0; Other Eukaryotes - 355 (source: NCBI BLink). & (p36494|cb4_spiol : 369.0) Chlorophyll a-b binding protein CP24, chloroplast precursor - Spinacia oleracea (Spinach) & (gnl|cdd|84819 : 151.0) no description available & (reliability: 772.0) & (original description: Putative CAP10B, Description = Chlorophyll a-b binding protein CP24 10B, chloroplastic, PFAM = PF00504)' T '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf02513_856697-859668' '(at1g15820 : 384.0) Lhcb6 protein (Lhcb6), light harvesting complex of photosystem II.; light harvesting complex photosystem II subunit 6 (LHCB6); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, nonphotochemical quenching; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 6 (TAIR:AT1G19150.1); Has 2316 Blast hits to 2191 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1959; Viruses - 0; Other Eukaryotes - 355 (source: NCBI BLink). & (p36494|cb4_spiol : 369.0) Chlorophyll a-b binding protein CP24, chloroplast precursor - Spinacia oleracea (Spinach) & (gnl|cdd|84819 : 151.0) no description available & (reliability: 768.0) & (original description: Putative Lhcb6, Description = Chlorophyll a-b binding protein, chloroplastic, PFAM = PF00504)' T '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf02852_218949-222016' '(p27494|cb23_tobac : 510.0) Chlorophyll a-b binding protein 36, chloroplast precursor (LHCII type I CAB-36) (LHCP) - Nicotiana tabacum (Common tobacco) & (at3g27690 : 475.0) Encodes Lhcb2.4. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus.; photosystem II light harvesting complex gene 2.3 (LHCB2.3); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast envelope; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem II light harvesting complex gene 2.1 (TAIR:AT2G05100.1); Has 2373 Blast hits to 2310 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2058; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink). & (gnl|cdd|84819 : 182.0) no description available & (reliability: 950.0) & (original description: Putative CAB4, Description = Chlorophyll a-b binding protein 4, chloroplastic, PFAM = PF00504)' T '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf02971_463963-467921' '(at5g54270 : 461.0) Lhcb3 protein is a component of the main light harvesting chlorophyll a/b-protein complex of Photosystem II (LHC II).; light-harvesting chlorophyll B-binding protein 3 (LHCB3); FUNCTIONS IN: structural molecule activity; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem II light harvesting complex gene 2.1 (TAIR:AT2G05100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p27523|cb23_horvu : 439.0) Chlorophyll a-b binding protein of LHCII type III, chloroplast precursor (CAB) - Hordeum vulgare (Barley) & (gnl|cdd|84819 : 179.0) no description available & (reliability: 922.0) & (original description: Putative CAB13, Description = Chlorophyll a-b binding protein 13, chloroplastic, PFAM = PF00504)' T '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf04504_341158-397031' '(at5g54270 : 456.0) Lhcb3 protein is a component of the main light harvesting chlorophyll a/b-protein complex of Photosystem II (LHC II).; light-harvesting chlorophyll B-binding protein 3 (LHCB3); FUNCTIONS IN: structural molecule activity; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem II light harvesting complex gene 2.1 (TAIR:AT2G05100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p27523|cb23_horvu : 437.0) Chlorophyll a-b binding protein of LHCII type III, chloroplast precursor (CAB) - Hordeum vulgare (Barley) & (gnl|cdd|84819 : 180.0) no description available & (reliability: 912.0) & (original description: Putative CAB13, Description = Chlorophyll a-b binding protein 13, chloroplastic, PFAM = PF00504)' T '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf08088_455858-458632' '(p27495|cb24_tobac : 336.0) Chlorophyll a-b binding protein 40, chloroplast precursor (LHCII type I CAB-40) (LHCP) - Nicotiana tabacum (Common tobacco) & (at1g29930 : 302.0) Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.; chlorophyll A/B binding protein 1 (CAB1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: guard cell, juvenile leaf, cultured cell; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 3 (TAIR:AT1G29910.1); Has 2419 Blast hits to 2339 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|84819 : 114.0) no description available & (reliability: 604.0) & (original description: Putative CAB3C, Description = Chlorophyll a-b binding protein 3C, chloroplastic, PFAM = PF00504)' T '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf11384_107867-112770' '(at3g08940 : 448.0) Lhcb4.2 protein (Lhcb4.2, protein involved in the light harvesting complex of photosystem II; light harvesting complex photosystem II (LHCB4.2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT5G01530.1); Has 2312 Blast hits to 2241 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 1976; Viruses - 0; Other Eukaryotes - 332 (source: NCBI BLink). & (q93wd2|cb29_chlre : 242.0) Chlorophyll a-b binding protein CP29 - Chlamydomonas reinhardtii & (gnl|cdd|84819 : 167.0) no description available & (reliability: 896.0) & (original description: Putative cab, Description = Chlorophyll a-b binding protein, chloroplastic, PFAM = PF00504)' T '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'niben101scf12382_134483-137283' '(p27495|cb24_tobac : 488.0) Chlorophyll a-b binding protein 40, chloroplast precursor (LHCII type I CAB-40) (LHCP) - Nicotiana tabacum (Common tobacco) & (at1g29930 : 440.0) Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.; chlorophyll A/B binding protein 1 (CAB1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: guard cell, juvenile leaf, cultured cell; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 3 (TAIR:AT1G29910.1); Has 2419 Blast hits to 2339 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|84819 : 182.0) no description available & (reliability: 880.0) & (original description: Putative CAB3C, Description = Chlorophyll a-b binding protein 3C, chloroplastic, PFAM = PF00504)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.3scaffold10272_29167-32275' '(at2g39470 : 241.0) PsbP-like protein 2 (PPL2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast photosystem II, chloroplast, oxygen evolving complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: PsbP-like protein 1 (TAIR:AT3G55330.1); Has 90 Blast hits to 90 proteins in 24 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|85679 : 142.0) no description available & (reliability: 482.0) & (original description: Putative PNSL1, Description = Photosynthetic NDH subunit of lumenal location 1, chloroplastic, PFAM = PF01789)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.3scaffold10900_1-3232' '(q7dm39|psbp1_tobac : 383.0) Oxygen-evolving enhancer protein 2-1, chloroplast precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) - Nicotiana tabacum (Common tobacco) & (at1g06680 : 304.0) Encodes a 23 kD extrinsic protein that is part of photosystem II and participates in the regulation of oxygen evolution.; photosystem II subunit P-1 (PSBP-1); FUNCTIONS IN: poly(U) RNA binding; INVOLVED IN: photosynthesis, light reaction, defense response to bacterium, response to light intensity; LOCATED IN: in 9 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: photosystem II subunit P-2 (TAIR:AT2G30790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85679 : 209.0) no description available & (reliability: 608.0) & (original description: Putative oeeB, Description = Photosystem II subunit P-1, PFAM = PF01789)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.3scaffold17062_4018-6692' '(at1g14150 : 184.0) Encodes a subunit of the NAD(P)H dehydrogenase complex located in the chloroplast thylakoid lumen.; PsbQ-like 2 (PQL2); FUNCTIONS IN: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; INVOLVED IN: photosynthetic electron transport chain; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbQ (InterPro:IPR008797); BEST Arabidopsis thaliana protein match is: PsbQ-like 1 (TAIR:AT3G01440.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69290 : 123.0) no description available & (reliability: 368.0) & (original description: Putative PNSL2, Description = Photosynthetic NDH subunit of lumenal location 2, chloroplastic, PFAM = PF05757)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.3scaffold19688_1-1991' '(p06411|psbb_tobac : 213.0) Photosystem II P680 chlorophyll A apoprotein (CP-47 protein) - Nicotiana tabacum (Common tobacco) & (atcg00680 : 211.0) encodes for CP47, subunit of the photosystem II reaction center.; photosystem II reaction center protein B (PSBB); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light reaction, photosystem II assembly; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem antenna protein-like (InterPro:IPR000932), Photosystem II, PsbB (InterPro:IPR017486); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein C (TAIR:ATCG00280.1). & (gnl|cdd|79279 : 204.0) no description available & (reliability: 422.0) & (original description: Putative psbB, Description = Photosystem II CP47 protein, PFAM = PF00421)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.3scaffold44907_13747-17220' '(q40519|psbr_tobac : 162.0) Photosystem II 10 kDa polypeptide, chloroplast precursor (PII10) - Nicotiana tabacum (Common tobacco) & (at1g79040 : 150.0) Encodes for the 10 kDa PsbR subunit of photosystem II (PSII). This subunit appears to be involved in the stable assembly of PSII, particularly that of the oxygen-evolving complex subunit PsbP. Mutants defective in this gene have reduced amounts of subunits PsbP and PsbQ in PSII. In turn, assembly of PsbR is dependent on the presence of PsbJ.; photosystem II subunit R (PSBR); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II oxygen evolving complex assembly, photosynthesis, response to light intensity; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, photosystem II; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbR (InterPro:IPR006814); Has 134 Blast hits to 134 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|68303 : 150.0) no description available & (reliability: 300.0) & (original description: Putative PSBR, Description = Photosystem II 10 kDa polypeptide, chloroplastic, PFAM = PF04725)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.3scaffold50988_1758-6294' '(at3g01440 : 234.0) Encodes a subunit of the NAD(P)H complex located in the chloroplast thylakoid lumen.; PsbQ-like 1 (PQL1); FUNCTIONS IN: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; INVOLVED IN: photosynthesis, light reaction, photosynthetic electron transport chain; LOCATED IN: in 7 components; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbQ (InterPro:IPR008797); BEST Arabidopsis thaliana protein match is: photosystem II subunit QA (TAIR:AT4G21280.1); Has 165 Blast hits to 165 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 165; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69290 : 163.0) no description available & (reliability: 468.0) & (original description: Putative PNSL3, Description = Photosynthetic NDH subunit of lumenal location 3, chloroplastic, PFAM = PF05757)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.3scaffold69122_881-8879' '(at3g55330 : 261.0) PsbP-like protein 1 (PPL1); FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: PsbP-like protein 2 (TAIR:AT2G39470.2); Has 595 Blast hits to 595 proteins in 103 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 0; Plants - 355; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|85679 : 111.0) no description available & (reliability: 522.0) & (original description: Putative ppl1, Description = PsbP-like protein 1, PFAM = PF01789)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.5scaffold136_1042686-1047745' '(at3g56650 : 327.0) Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein (TAIR:AT1G77090.1); Has 131 Blast hits to 131 proteins in 35 species: Archae - 0; Bacteria - 29; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 654.0) & (original description: Putative PPD6, Description = Photosystem II reaction center PsbP family protein, PFAM = PF01789)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.5scaffold334_634401-636988' '(p80470|psby_spiol : 135.0) Photosystem II core complex proteins psbY, chloroplast precursor (L-arginine-metabolizing enzyme) (L-AME) [Contains: Photosystem II protein psbY-1 (psbY-A1); Photosystem II protein psbY-2 (psbY-A2)] - Spinacia oleracea (Spinach) & (at1g67740 : 112.0) PsbY precursor (psbY) mRNA. This single nuclear gene is imported into the chloroplasts where it is processed into two integral membrane proteins with identical topology (PsbY-1 and PsbY-2). The protein appears to bind manganese but its role is not well understood.; photosystem II BY (PSBY); FUNCTIONS IN: manganese ion binding; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, chloroplast photosystem II, photosystem II; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbY (InterPro:IPR009388); Has 135 Blast hits to 91 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative PSBY, Description = Photosystem II core complex proteins psbY, PFAM = PF06298;PF06298)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.5scaffold999_509124-511733' '(p06411|psbb_tobac : 241.0) Photosystem II P680 chlorophyll A apoprotein (CP-47 protein) - Nicotiana tabacum (Common tobacco) & (atcg00680 : 239.0) encodes for CP47, subunit of the photosystem II reaction center.; photosystem II reaction center protein B (PSBB); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light reaction, photosystem II assembly; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem antenna protein-like (InterPro:IPR000932), Photosystem II, PsbB (InterPro:IPR017486); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein C (TAIR:ATCG00280.1). & (gnl|cdd|79279 : 236.0) no description available & (reliability: 478.0) & (original description: Putative cp47, Description = PSII 47 kDa protein, PFAM = PF00421)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.5scaffold1289_354499-359285' '(at1g05385 : 133.0) Encodes a Psb27 homolog involved in photosystem II biogenesis.; LOW PSII ACCUMULATION 19 (LPA19); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II assembly; LOCATED IN: chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 214 Blast hits to 214 proteins in 55 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative LPA19, Description = LOW PSII accumulation 19 protein, PFAM = PF13326)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.5scaffold1717_472901-482922' '(at1g76450 : 247.0) Photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124); Has 57 Blast hits to 57 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 494.0) & (original description: Putative PPD3, Description = Photosystem II reaction center PsbP family protein, PFAM = PF01789)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.5scaffold2367_189306-213243' '(gnl|cdd|87217 : 128.0) no description available & (at2g30570 : 92.8) Encodes a protein similar to photosystem II reaction center subunit W.; photosystem II reaction center W (PSBW); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbW, class 2 (InterPro:IPR009806); Has 77 Blast hits to 77 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q41387|psbw_spiol : 82.0) Photosystem II reaction center W protein, chloroplast precursor (PSII 6.1 kDa protein) - Spinacia oleracea (Spinach) & (reliability: 185.6) & (original description: Putative PSBW, Description = Photosystem II reaction center W protein, chloroplastic, PFAM = PF07123)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.5scaffold3349_254214-256839' '(gnl|cdd|79279 : 1005.0) no description available & (p06411|psbb_tobac : 994.0) Photosystem II P680 chlorophyll A apoprotein (CP-47 protein) - Nicotiana tabacum (Common tobacco) & (atcg00680 : 986.0) encodes for CP47, subunit of the photosystem II reaction center.; photosystem II reaction center protein B (PSBB); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light reaction, photosystem II assembly; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem antenna protein-like (InterPro:IPR000932), Photosystem II, PsbB (InterPro:IPR017486); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein C (TAIR:ATCG00280.1). & (reliability: 1972.0) & (original description: Putative psbB, Description = Photosystem II CP47 reaction center protein, PFAM = PF00421)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.5scaffold3540_131993-134484' '(gnl|cdd|79223 : 313.0) no description available & (p06006|psbd_pea : 290.0) Photosystem II D2 protein (Photosystem Q(A) protein) (PSII D2 protein) - Pisum sativum (Garden pea) & (atcg00270 : 289.0) PSII D2 protein; photosystem II reaction center protein D (PSBD); FUNCTIONS IN: electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity; INVOLVED IN: photosynthetic electron transport in photosystem II, photosynthesis, light harvesting in photosystem II; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosynthetic reaction centre, L/M (InterPro:IPR000484), Photosystem II reaction centre protein PsbD/D2 (InterPro:IPR005868); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein A (TAIR:ATCG00020.1). & (reliability: 578.0) & (original description: Putative psbD, Description = PsbD, PFAM = PF00124)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'nbv0.5scaffold7813_47934-50152' '(p06415|psbh_tobac : 131.0) Photosystem II reaction center protein H (PSII-H) (Photosystem II 10 kDa phosphoprotein) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79283 : 131.0) no description available & (atcg00710 : 123.0) Encodes a 8 kD phosphoprotein that is a component of the photosystem II oxygen evolving core. Its exact molecular function has not been determined but it may play a role in mediating electron transfer between the secondary quinone acceptors, QA and QB, associated with the acceptor side of PSII.; photosystem II reaction center protein H (PSBH); FUNCTIONS IN: phosphate binding; INVOLVED IN: photosynthesis, light harvesting in photosystem II; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, oxygen evolving complex, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II phosphoprotein PsbH (InterPro:IPR001056). & (reliability: 246.0) & (original description: Putative psbH, Description = Photosystem II reaction center protein H, PFAM = PF00737)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben044scf00008453ctg017_415-2755' '(p06411|psbb_tobac : 214.0) Photosystem II P680 chlorophyll A apoprotein (CP-47 protein) - Nicotiana tabacum (Common tobacco) & (atcg00680 : 212.0) encodes for CP47, subunit of the photosystem II reaction center.; photosystem II reaction center protein B (PSBB); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light reaction, photosystem II assembly; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem antenna protein-like (InterPro:IPR000932), Photosystem II, PsbB (InterPro:IPR017486); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein C (TAIR:ATCG00280.1). & (gnl|cdd|79279 : 207.0) no description available & (reliability: 424.0) & (original description: Putative psbB, Description = Photosystem II CP47 protein, PFAM = PF00421)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben044scf00020251ctg006_2694-5005' '(atcg00680 : 149.0) encodes for CP47, subunit of the photosystem II reaction center.; photosystem II reaction center protein B (PSBB); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light reaction, photosystem II assembly; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem antenna protein-like (InterPro:IPR000932), Photosystem II, PsbB (InterPro:IPR017486); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein C (TAIR:ATCG00280.1). & (p06411|psbb_tobac : 149.0) Photosystem II P680 chlorophyll A apoprotein (CP-47 protein) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79279 : 145.0) no description available & (reliability: 298.0) & (original description: Putative cp47, Description = PSII 47 kDa protein, PFAM = PF00421)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben044scf00029630ctg010_1-3218' '(q40519|psbr_tobac : 182.0) Photosystem II 10 kDa polypeptide, chloroplast precursor (PII10) - Nicotiana tabacum (Common tobacco) & (at1g79040 : 144.0) Encodes for the 10 kDa PsbR subunit of photosystem II (PSII). This subunit appears to be involved in the stable assembly of PSII, particularly that of the oxygen-evolving complex subunit PsbP. Mutants defective in this gene have reduced amounts of subunits PsbP and PsbQ in PSII. In turn, assembly of PsbR is dependent on the presence of PsbJ.; photosystem II subunit R (PSBR); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II oxygen evolving complex assembly, photosynthesis, response to light intensity; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, photosystem II; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbR (InterPro:IPR006814); Has 134 Blast hits to 134 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|68303 : 105.0) no description available & (reliability: 288.0) & (original description: Putative psII10, Description = Photosystem II 10 kDa polypeptide, chloroplast, PFAM = PF04725)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben044scf00032545ctg000_2559-6497' '(q40459|psbo_tobac : 589.0) Oxygen-evolving enhancer protein 1, chloroplast precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) - Nicotiana tabacum (Common tobacco) & (at3g50820 : 514.0) Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In Arabidopsis thaliana the PsbO proteins are encoded by two genes: psbO1 and psbO2. PsbO2 is the minor isoform in the wild-type. Mutants defective in this gene have been shown to be affected in the dephosphorylation of the D1 protein of PSII.; photosystem II subunit O-2 (PSBO2); FUNCTIONS IN: oxygen evolving activity, poly(U) RNA binding; INVOLVED IN: photosynthesis, light reaction, photoinhibition, photosystem II assembly, photosystem II stabilization, regulation of protein amino acid dephosphorylation; LOCATED IN: in 9 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II manganese-stabilising protein PsbO (InterPro:IPR002628); BEST Arabidopsis thaliana protein match is: PS II oxygen-evolving complex 1 (TAIR:AT5G66570.1); Has 534 Blast hits to 532 proteins in 148 species: Archae - 0; Bacteria - 144; Metazoa - 1; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (gnl|cdd|65505 : 339.0) no description available & (reliability: 1028.0) & (original description: Putative PSBO, Description = Oxygen-evolving enhancer protein 1, chloroplastic, PFAM = PF01716)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben044scf00038205ctg003_10973-13014' '(gnl|cdd|87217 : 94.1) no description available & (q41387|psbw_spiol : 88.6) Photosystem II reaction center W protein, chloroplast precursor (PSII 6.1 kDa protein) - Spinacia oleracea (Spinach) & (at2g30570 : 87.8) Encodes a protein similar to photosystem II reaction center subunit W.; photosystem II reaction center W (PSBW); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbW, class 2 (InterPro:IPR009806); Has 77 Blast hits to 77 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative PsbW, Description = Photosystem II reaction center, PFAM = PF07123)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben044scf00047870ctg002_12610-14112' '(gnl|cdd|79279 : 306.0) no description available & (p06411|psbb_tobac : 295.0) Photosystem II P680 chlorophyll A apoprotein (CP-47 protein) - Nicotiana tabacum (Common tobacco) & (atcg00680 : 292.0) encodes for CP47, subunit of the photosystem II reaction center.; photosystem II reaction center protein B (PSBB); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light reaction, photosystem II assembly; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem antenna protein-like (InterPro:IPR000932), Photosystem II, PsbB (InterPro:IPR017486); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein C (TAIR:ATCG00280.1). & (reliability: 584.0) & (original description: Putative psbB, Description = Photosystem II 47 kDa protein 3, PFAM = PF00421)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben044scf00055396ctg005_208-4235' '(at1g05385 : 122.0) Encodes a Psb27 homolog involved in photosystem II biogenesis.; LOW PSII ACCUMULATION 19 (LPA19); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II assembly; LOCATED IN: chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 214 Blast hits to 214 proteins in 55 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative LPA19, Description = LOW PSII accumulation 19 protein, PFAM = PF13326)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben044scf00055576ctg000_1-3644' '(at5g11450 : 197.0) Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative gpm35, Description = Photosystem II reaction center PsbP family protein, PFAM = )' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf00058_943574-948747' '(at1g05385 : 189.0) Encodes a Psb27 homolog involved in photosystem II biogenesis.; LOW PSII ACCUMULATION 19 (LPA19); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II assembly; LOCATED IN: chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 214 Blast hits to 214 proteins in 55 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative LPA19, Description = LOW PSII accumulation 19 protein, PFAM = PF13326)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf00176_542087-545367' '(gnl|cdd|69290 : 232.0) no description available & (at4g05180 : 214.0) Encodes the PsbQ subunit of the oxygen evolving complex of photosystem II.; photosystem II subunit Q-2 (PSBQ-2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: peptidyl-cysteine S-nitrosylation; LOCATED IN: in 9 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbQ (InterPro:IPR008797); BEST Arabidopsis thaliana protein match is: photosystem II subunit QA (TAIR:AT4G21280.1); Has 206 Blast hits to 206 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (p12301|psbq_spiol : 210.0) Oxygen-evolving enhancer protein 3, chloroplast precursor (OEE3) (16 kDa subunit of oxygen evolving system of photosystem II) (OEC 16 kDa subunit) - Spinacia oleracea (Spinach) & (reliability: 428.0) & (original description: Putative psbQ, Description = Chloroplast oxygen-evolving protein 16 kDa subunit, PFAM = PF05757)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf00337_687279-696195' '(at3g55330 : 271.0) PsbP-like protein 1 (PPL1); FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: PsbP-like protein 2 (TAIR:AT2G39470.2); Has 595 Blast hits to 595 proteins in 103 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 0; Plants - 355; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|85679 : 113.0) no description available & (reliability: 542.0) & (original description: Putative PPL1, Description = PsbP-like protein 1, chloroplastic, PFAM = PF01789)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf00578_605-9383' '(at3g01440 : 236.0) Encodes a subunit of the NAD(P)H complex located in the chloroplast thylakoid lumen.; PsbQ-like 1 (PQL1); FUNCTIONS IN: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; INVOLVED IN: photosynthesis, light reaction, photosynthetic electron transport chain; LOCATED IN: in 7 components; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbQ (InterPro:IPR008797); BEST Arabidopsis thaliana protein match is: photosystem II subunit QA (TAIR:AT4G21280.1); Has 165 Blast hits to 165 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 165; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69290 : 166.0) no description available & (reliability: 472.0) & (original description: Putative PNSL3, Description = Photosynthetic NDH subunit of lumenal location 3, chloroplastic, PFAM = PF05757)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf00879_523142-525654' '(at1g03600 : 153.0) PSB27; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II repair; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast photosystem II, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 273 Blast hits to 273 proteins in 82 species: Archae - 0; Bacteria - 114; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative BnaA08g27510D, Description = BnaA08g27510D protein, PFAM = PF13326)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf01116_187040-191479' '(q40519|psbr_tobac : 199.0) Photosystem II 10 kDa polypeptide, chloroplast precursor (PII10) - Nicotiana tabacum (Common tobacco) & (at1g79040 : 169.0) Encodes for the 10 kDa PsbR subunit of photosystem II (PSII). This subunit appears to be involved in the stable assembly of PSII, particularly that of the oxygen-evolving complex subunit PsbP. Mutants defective in this gene have reduced amounts of subunits PsbP and PsbQ in PSII. In turn, assembly of PsbR is dependent on the presence of PsbJ.; photosystem II subunit R (PSBR); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II oxygen evolving complex assembly, photosynthesis, response to light intensity; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, photosystem II; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbR (InterPro:IPR006814); Has 134 Blast hits to 134 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|68303 : 147.0) no description available & (reliability: 338.0) & (original description: Putative PSBR, Description = Photosystem II 10 kDa polypeptide, chloroplastic, PFAM = PF04725)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf01208_179066-180848' '(p06411|psbb_tobac : 223.0) Photosystem II P680 chlorophyll A apoprotein (CP-47 protein) - Nicotiana tabacum (Common tobacco) & (atcg00680 : 222.0) encodes for CP47, subunit of the photosystem II reaction center.; photosystem II reaction center protein B (PSBB); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light reaction, photosystem II assembly; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem antenna protein-like (InterPro:IPR000932), Photosystem II, PsbB (InterPro:IPR017486); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein C (TAIR:ATCG00280.1). & (gnl|cdd|79279 : 216.0) no description available & (reliability: 444.0) & (original description: Putative psbB, Description = Photosystem II CP47 protein, PFAM = PF00421)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf01818_434431-438758' '(at2g28605 : 221.0) Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side).; Photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); Has 131 Blast hits to 131 proteins in 58 species: Archae - 0; Bacteria - 54; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative PPD2, Description = PsbP domain-containing protein 2, chloroplastic, PFAM = PF01789)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf02104_5542-8664' '(gnl|cdd|79222 : 655.0) no description available & (p69556|psba_tobac : 641.0) Photosystem Q(B) protein (32 kDa thylakoid membrane protein) (Photosystem II protein D1) - Nicotiana tabacum (Common tobacco) & (atcg00020 : 640.0) Encodes chlorophyll binding protein D1, a part of the photosystem II reaction center core; photosystem II reaction center protein A (PSBA); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light reaction; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II reaction centre protein PsbA/D1 (InterPro:IPR005867), Photosynthetic reaction centre, L/M (InterPro:IPR000484); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein D (TAIR:ATCG00270.1). & (reliability: 1280.0) & (original description: Putative psbA, Description = Photosystem II protein D1, PFAM = PF00124)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf02160_389271-473238' '(at3g55330 : 261.0) PsbP-like protein 1 (PPL1); FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: PsbP-like protein 2 (TAIR:AT2G39470.2); Has 595 Blast hits to 595 proteins in 103 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 0; Plants - 355; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|85679 : 112.0) no description available & (reliability: 522.0) & (original description: Putative ppl1, Description = PsbP-like protein 1, PFAM = PF01789)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf02160_638477-640725' '(atcg00580 : 155.0) PSII cytochrome b559. There have been many speculations about the function of Cyt b559, but the most favored at present is that it plays a protective role by acting as an electron acceptor or electron donor under conditions when electron flow through PSII is not optimized.; photosystem II reaction center protein E (PSBE); FUNCTIONS IN: electron carrier activity, heme binding; INVOLVED IN: photosynthesis, light harvesting in photosystem II; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, oxygen evolving complex, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein cytochrome b559, N-terminal (InterPro:IPR013081), Photosystem II protein cytochrome b559, conserved site (InterPro:IPR006216), Photosystem II protein cytochrome b559, alpha subunit, lumenal region (InterPro:IPR013082), Photosystem II protein cytochrome b559, alpha subunit (InterPro:IPR006217). & (q2veg1|psbe_soltu : 155.0) Cytochrome b559 alpha subunit (PSII reaction center subunit V) - Solanum tuberosum (Potato) & (gnl|cdd|79281 : 149.0) no description available & (reliability: 310.0) & (original description: Putative psbE, Description = Cytochrome b559 subunit alpha, PFAM = PF00284;PF00283)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf02469_51764-54651' '(gnl|cdd|87217 : 121.0) no description available & (q41387|psbw_spiol : 113.0) Photosystem II reaction center W protein, chloroplast precursor (PSII 6.1 kDa protein) - Spinacia oleracea (Spinach) & (at2g30570 : 112.0) Encodes a protein similar to photosystem II reaction center subunit W.; photosystem II reaction center W (PSBW); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbW, class 2 (InterPro:IPR009806); Has 77 Blast hits to 77 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative PSBW, Description = Photosystem II reaction center W protein, chloroplastic, PFAM = PF07123)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf02494_416289-422153' '(at5g51545 : 101.0) Encodes LPA2 (low psii accumulation2), an intrinsic thylakoid membrane protein required for efficient assembly of Photosystem II.; low psii accumulation2 (LPA2); INVOLVED IN: photosystem II assembly; LOCATED IN: chloroplast, thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 38 Blast hits to 38 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative LPA2, Description = Protein LOW PSII ACCUMULATION 2, chloroplastic, PFAM = )' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf02517_1637324-1640715' '(at2g39470 : 261.0) PsbP-like protein 2 (PPL2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast photosystem II, chloroplast, oxygen evolving complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: PsbP-like protein 1 (TAIR:AT3G55330.1); Has 90 Blast hits to 90 proteins in 24 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|85679 : 144.0) no description available & (reliability: 522.0) & (original description: Putative PNSL1, Description = Photosynthetic NDH subunit of lumenal location 1, chloroplastic, PFAM = PF01789)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf02608_411302-414839' '(q40459|psbo_tobac : 575.0) Oxygen-evolving enhancer protein 1, chloroplast precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) - Nicotiana tabacum (Common tobacco) & (at3g50820 : 511.0) Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In Arabidopsis thaliana the PsbO proteins are encoded by two genes: psbO1 and psbO2. PsbO2 is the minor isoform in the wild-type. Mutants defective in this gene have been shown to be affected in the dephosphorylation of the D1 protein of PSII.; photosystem II subunit O-2 (PSBO2); FUNCTIONS IN: oxygen evolving activity, poly(U) RNA binding; INVOLVED IN: photosynthesis, light reaction, photoinhibition, photosystem II assembly, photosystem II stabilization, regulation of protein amino acid dephosphorylation; LOCATED IN: in 9 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II manganese-stabilising protein PsbO (InterPro:IPR002628); BEST Arabidopsis thaliana protein match is: PS II oxygen-evolving complex 1 (TAIR:AT5G66570.1); Has 534 Blast hits to 532 proteins in 148 species: Archae - 0; Bacteria - 144; Metazoa - 1; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (gnl|cdd|65505 : 338.0) no description available & (reliability: 1022.0) & (original description: Putative PSBO, Description = Oxygen-evolving enhancer protein 1, chloroplastic, PFAM = PF01716)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf02790_536537-538902' '(at2g06520 : 80.5) Encodes a protein with sequence similarity to the spinach photosystem II subunit PsbX.; photosystem II subunit X (PSBX); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbX (InterPro:IPR009518); Has 63 Blast hits to 63 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative psbX, Description = Chloroplast photosystem II subunit X, PFAM = PF06596)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf02840_114787-117461' '(at1g14150 : 142.0) Encodes a subunit of the NAD(P)H dehydrogenase complex located in the chloroplast thylakoid lumen.; PsbQ-like 2 (PQL2); FUNCTIONS IN: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; INVOLVED IN: photosynthetic electron transport chain; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbQ (InterPro:IPR008797); BEST Arabidopsis thaliana protein match is: PsbQ-like 1 (TAIR:AT3G01440.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69290 : 84.3) no description available & (reliability: 284.0) & (original description: Putative 2, Description = Photosynthetic NDH subcomplex L 2, PFAM = PF05757;PF05757)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf03856_321090-324928' '(q40519|psbr_tobac : 159.0) Photosystem II 10 kDa polypeptide, chloroplast precursor (PII10) - Nicotiana tabacum (Common tobacco) & (at1g79040 : 149.0) Encodes for the 10 kDa PsbR subunit of photosystem II (PSII). This subunit appears to be involved in the stable assembly of PSII, particularly that of the oxygen-evolving complex subunit PsbP. Mutants defective in this gene have reduced amounts of subunits PsbP and PsbQ in PSII. In turn, assembly of PsbR is dependent on the presence of PsbJ.; photosystem II subunit R (PSBR); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II oxygen evolving complex assembly, photosynthesis, response to light intensity; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, photosystem II; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbR (InterPro:IPR006814); Has 134 Blast hits to 134 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|68303 : 149.0) no description available & (reliability: 298.0) & (original description: Putative PSBR, Description = Photosystem II 10 kDa polypeptide, chloroplastic, PFAM = PF04725)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf03877_34756-39180' '(at3g56650 : 330.0) Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein (TAIR:AT1G77090.1); Has 131 Blast hits to 131 proteins in 35 species: Archae - 0; Bacteria - 29; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 660.0) & (original description: Putative PPD6, Description = PsbP domain-containing protein 6, chloroplastic, PFAM = PF01789)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf04663_580014-596470' '(at5g11450 : 328.0) Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative PPD5, Description = PsbP domain-containing protein 5, chloroplastic, PFAM = PF01789)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf05226_675313-684329' '(at1g76450 : 242.0) Photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124); Has 57 Blast hits to 57 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 484.0) & (original description: Putative PPD3, Description = Photosystem II reaction center PsbP family protein, PFAM = PF01789)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf05304_387782-392985' '(q9smb4|psbs_tobac : 331.0) Photosystem II 22 kDa protein, chloroplast precursor (CP22) - Nicotiana tabacum (Common tobacco) & (at1g44575 : 260.0) Encoding PSII-S (CP22), a ubiquitous pigment-binding protein associated with photosystem II (PSII) of higher plants. Involved in nonphotochemical quenching rather than in photosynthesis. Mutant has a normal violaxanthin cycle but has a limited capacity of quenching singlet excited chlorophylls and is tolerant to lipid peroxidation.; NONPHOTOCHEMICAL QUENCHING 4 (NPQ4); FUNCTIONS IN: chlorophyll binding, xanthophyll binding; INVOLVED IN: response to karrikin, nonphotochemical quenching; LOCATED IN: chloroplast thylakoid membrane, chloroplast, PSII associated light-harvesting complex II, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 520.0) & (original description: Putative PSBS, Description = Photosystem II 22 kDa protein, chloroplastic, PFAM = PF00504)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf05419_55507-60452' '(at1g05385 : 182.0) Encodes a Psb27 homolog involved in photosystem II biogenesis.; LOW PSII ACCUMULATION 19 (LPA19); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II assembly; LOCATED IN: chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 214 Blast hits to 214 proteins in 55 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative LPA19, Description = LOW PSII accumulation 19 protein, PFAM = PF13326)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf05437_483712-486299' '(p80470|psby_spiol : 124.0) Photosystem II core complex proteins psbY, chloroplast precursor (L-arginine-metabolizing enzyme) (L-AME) [Contains: Photosystem II protein psbY-1 (psbY-A1); Photosystem II protein psbY-2 (psbY-A2)] - Spinacia oleracea (Spinach) & (at1g67740 : 102.0) PsbY precursor (psbY) mRNA. This single nuclear gene is imported into the chloroplasts where it is processed into two integral membrane proteins with identical topology (PsbY-1 and PsbY-2). The protein appears to bind manganese but its role is not well understood.; photosystem II BY (PSBY); FUNCTIONS IN: manganese ion binding; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, chloroplast photosystem II, photosystem II; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbY (InterPro:IPR009388); Has 135 Blast hits to 91 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative PSBY, Description = Photosystem II core complex proteins psbY, PFAM = PF06298;PF06298)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf05555_53698-57668' '(q40459|psbo_tobac : 589.0) Oxygen-evolving enhancer protein 1, chloroplast precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) - Nicotiana tabacum (Common tobacco) & (at3g50820 : 512.0) Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In Arabidopsis thaliana the PsbO proteins are encoded by two genes: psbO1 and psbO2. PsbO2 is the minor isoform in the wild-type. Mutants defective in this gene have been shown to be affected in the dephosphorylation of the D1 protein of PSII.; photosystem II subunit O-2 (PSBO2); FUNCTIONS IN: oxygen evolving activity, poly(U) RNA binding; INVOLVED IN: photosynthesis, light reaction, photoinhibition, photosystem II assembly, photosystem II stabilization, regulation of protein amino acid dephosphorylation; LOCATED IN: in 9 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II manganese-stabilising protein PsbO (InterPro:IPR002628); BEST Arabidopsis thaliana protein match is: PS II oxygen-evolving complex 1 (TAIR:AT5G66570.1); Has 534 Blast hits to 532 proteins in 148 species: Archae - 0; Bacteria - 144; Metazoa - 1; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (gnl|cdd|65505 : 338.0) no description available & (reliability: 1024.0) & (original description: Putative PSBO, Description = Oxygen-evolving enhancer protein 1, chloroplastic, PFAM = PF01716)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf05782_130973-135295' '(q7dm39|psbp1_tobac : 456.0) Oxygen-evolving enhancer protein 2-1, chloroplast precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) - Nicotiana tabacum (Common tobacco) & (at1g06680 : 377.0) Encodes a 23 kD extrinsic protein that is part of photosystem II and participates in the regulation of oxygen evolution.; photosystem II subunit P-1 (PSBP-1); FUNCTIONS IN: poly(U) RNA binding; INVOLVED IN: photosynthesis, light reaction, defense response to bacterium, response to light intensity; LOCATED IN: in 9 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: photosystem II subunit P-2 (TAIR:AT2G30790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85679 : 277.0) no description available & (reliability: 754.0) & (original description: Putative PSBP1, Description = Oxygen-evolving enhancer protein 2-1, chloroplastic, PFAM = PF01789)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf05801_94774-97876' '(gnl|cdd|87217 : 125.0) no description available & (q41387|psbw_spiol : 117.0) Photosystem II reaction center W protein, chloroplast precursor (PSII 6.1 kDa protein) - Spinacia oleracea (Spinach) & (at2g30570 : 115.0) Encodes a protein similar to photosystem II reaction center subunit W.; photosystem II reaction center W (PSBW); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbW, class 2 (InterPro:IPR009806); Has 77 Blast hits to 77 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative PSBW, Description = Photosystem II reaction center W protein, chloroplastic, PFAM = PF07123)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf06008_176611-179153' '(at2g01918 : 105.0) Encode a protein homologous to each PQL protein. Mutational analysis indicates that PQL3 is also required for NDH activity.; PsbQ-like 3 (PQL3); CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbQ (InterPro:IPR008797); BEST Arabidopsis thaliana protein match is: photosystem II subunit QA (TAIR:AT4G21280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69290 : 83.5) no description available & (reliability: 210.0) & (original description: Putative PQL3, Description = PQL-like protein, PFAM = PF05757)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf06117_568657-571087' '(at1g03600 : 162.0) PSB27; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II repair; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast photosystem II, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 273 Blast hits to 273 proteins in 82 species: Archae - 0; Bacteria - 114; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative BnaAnng39860D, Description = BnaAnng39860D protein, PFAM = PF13326)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf06826_924983-930921' '(p18212|psbp2_tobac : 510.0) Oxygen-evolving enhancer protein 2-2, chloroplast precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) - Nicotiana tabacum (Common tobacco) & (at1g06680 : 367.0) Encodes a 23 kD extrinsic protein that is part of photosystem II and participates in the regulation of oxygen evolution.; photosystem II subunit P-1 (PSBP-1); FUNCTIONS IN: poly(U) RNA binding; INVOLVED IN: photosynthesis, light reaction, defense response to bacterium, response to light intensity; LOCATED IN: in 9 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: photosystem II subunit P-2 (TAIR:AT2G30790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85679 : 293.0) no description available & (reliability: 734.0) & (original description: Putative PSBP2, Description = Oxygen-evolving enhancer protein 2-2, chloroplastic, PFAM = PF01789)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf06964_1069-3560' '(gnl|cdd|79223 : 303.0) no description available & (atcg00270 : 280.0) PSII D2 protein; photosystem II reaction center protein D (PSBD); FUNCTIONS IN: electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity; INVOLVED IN: photosynthetic electron transport in photosystem II, photosynthesis, light harvesting in photosystem II; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosynthetic reaction centre, L/M (InterPro:IPR000484), Photosystem II reaction centre protein PsbD/D2 (InterPro:IPR005868); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein A (TAIR:ATCG00020.1). & (p06006|psbd_pea : 280.0) Photosystem II D2 protein (Photosystem Q(A) protein) (PSII D2 protein) - Pisum sativum (Garden pea) & (reliability: 560.0) & (original description: Putative psbD, Description = PsbD, PFAM = PF00124)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf07589_294997-308256' '(at4g15510 : 306.0) Photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: PsbP-like protein 1 (TAIR:AT3G55330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85679 : 155.0) no description available & (reliability: 612.0) & (original description: Putative PPD1, Description = PsbP-domain protein 1, PFAM = PF01789)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf10085_117571-122825' '(at4g15510 : 305.0) Photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: PsbP-like protein 1 (TAIR:AT3G55330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85679 : 153.0) no description available & (reliability: 610.0) & (original description: Putative PPD1, Description = PsbP-domain protein 1, PFAM = PF01789)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf11852_172944-178152' '(q9smb4|psbs_tobac : 318.0) Photosystem II 22 kDa protein, chloroplast precursor (CP22) - Nicotiana tabacum (Common tobacco) & (at1g44575 : 257.0) Encoding PSII-S (CP22), a ubiquitous pigment-binding protein associated with photosystem II (PSII) of higher plants. Involved in nonphotochemical quenching rather than in photosynthesis. Mutant has a normal violaxanthin cycle but has a limited capacity of quenching singlet excited chlorophylls and is tolerant to lipid peroxidation.; NONPHOTOCHEMICAL QUENCHING 4 (NPQ4); FUNCTIONS IN: chlorophyll binding, xanthophyll binding; INVOLVED IN: response to karrikin, nonphotochemical quenching; LOCATED IN: chloroplast thylakoid membrane, chloroplast, PSII associated light-harvesting complex II, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 514.0) & (original description: Putative PSBS, Description = Photosystem II 22 kDa protein, chloroplastic, PFAM = PF00504)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf12159_921659-935978' '(gnl|cdd|87217 : 125.0) no description available & (at2g30570 : 87.0) Encodes a protein similar to photosystem II reaction center subunit W.; photosystem II reaction center W (PSBW); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbW, class 2 (InterPro:IPR009806); Has 77 Blast hits to 77 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q41387|psbw_spiol : 85.5) Photosystem II reaction center W protein, chloroplast precursor (PSII 6.1 kDa protein) - Spinacia oleracea (Spinach) & (reliability: 174.0) & (original description: Putative PSBW, Description = Photosystem II reaction center W protein, chloroplastic, PFAM = PF07123)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf12858_153710-157331' '(at1g77090 : 337.0) Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein (TAIR:AT3G56650.1); Has 207 Blast hits to 207 proteins in 35 species: Archae - 0; Bacteria - 22; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (reliability: 674.0) & (original description: Putative PPD4, Description = PsbP domain-containing protein 4, chloroplastic, PFAM = PF01789)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf15187_360674-365112' '(q04127|psbp3_tobac : 156.0) Oxygen-evolving enhancer protein 2-3, chloroplast precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) - Nicotiana tabacum (Common tobacco) & (at1g06680 : 135.0) Encodes a 23 kD extrinsic protein that is part of photosystem II and participates in the regulation of oxygen evolution.; photosystem II subunit P-1 (PSBP-1); FUNCTIONS IN: poly(U) RNA binding; INVOLVED IN: photosynthesis, light reaction, defense response to bacterium, response to light intensity; LOCATED IN: in 9 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: photosystem II subunit P-2 (TAIR:AT2G30790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85679 : 120.0) no description available & (reliability: 270.0) & (original description: Putative oeeB, Description = Photosystem II subunit P-1, PFAM = PF01789;PF01789)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf15187_361701-366370' '(p18212|psbp2_tobac : 484.0) Oxygen-evolving enhancer protein 2-2, chloroplast precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) - Nicotiana tabacum (Common tobacco) & (at1g06680 : 340.0) Encodes a 23 kD extrinsic protein that is part of photosystem II and participates in the regulation of oxygen evolution.; photosystem II subunit P-1 (PSBP-1); FUNCTIONS IN: poly(U) RNA binding; INVOLVED IN: photosynthesis, light reaction, defense response to bacterium, response to light intensity; LOCATED IN: in 9 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: photosystem II subunit P-2 (TAIR:AT2G30790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85679 : 290.0) no description available & (reliability: 680.0) & (original description: Putative PSBP2, Description = Oxygen-evolving enhancer protein 2-2, chloroplastic, PFAM = PF01789)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf15435_1-3463' '(at2g28605 : 221.0) Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side).; Photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); Has 131 Blast hits to 131 proteins in 58 species: Archae - 0; Bacteria - 54; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative PPD2, Description = PsbP domain-containing protein 2, chloroplastic, PFAM = PF01789)' T '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'niben101scf28115_201578-203730' '(at5g02120 : 116.0) Encodes a one helix protein homologous to cyanobacterial high-light inducible proteins. The protein is localized to the thylakoid membrane and its transcript is transiently induced by exposure to high light conditions.; one helix protein (OHP); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to high light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 58 Blast hits to 58 proteins in 21 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative HLIP, Description = High-light-induced protein, chloroplastic, PFAM = )' T '1.1.1.3' 'PS.lightreaction.photosystem II.biogenesis' 'nbv0.3scaffold50129_10123-15131' '(at5g23120 : 212.0) encodes a stability and/or assembly factor of photosystem II; HIGH CHLOROPHYLL FLUORESCENCE 136 (HCF136); INVOLVED IN: response to cadmium ion, plastid organization, protein complex assembly; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BNR repeat (InterPro:IPR002860), Photosystem II stability/assembly factor, HCF136 (InterPro:IPR016705), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5z5a8|p2saf_orysa : 209.0) Photosystem II stability/assembly factor HCF136, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|34127 : 95.1) no description available & (reliability: 424.0) & (original description: Putative ycf48, Description = Ycf48-like protein, PFAM = PF14870)' T '1.1.1.3' 'PS.lightreaction.photosystem II.biogenesis' 'nbv0.3scaffold61872_1-6220' '(at5g23120 : 413.0) encodes a stability and/or assembly factor of photosystem II; HIGH CHLOROPHYLL FLUORESCENCE 136 (HCF136); INVOLVED IN: response to cadmium ion, plastid organization, protein complex assembly; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BNR repeat (InterPro:IPR002860), Photosystem II stability/assembly factor, HCF136 (InterPro:IPR016705), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5z5a8|p2saf_orysa : 409.0) Photosystem II stability/assembly factor HCF136, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|34127 : 167.0) no description available & (gnl|cdd|38720 : 166.0) no description available & (reliability: 826.0) & (original description: Putative hcf, Description = Ycf48-like protein, PFAM = PF14870)' T '1.1.1.3' 'PS.lightreaction.photosystem II.biogenesis' 'niben044scf00044787ctg001_5196-13828' '(at5g23120 : 559.0) encodes a stability and/or assembly factor of photosystem II; HIGH CHLOROPHYLL FLUORESCENCE 136 (HCF136); INVOLVED IN: response to cadmium ion, plastid organization, protein complex assembly; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BNR repeat (InterPro:IPR002860), Photosystem II stability/assembly factor, HCF136 (InterPro:IPR016705), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5z5a8|p2saf_orysa : 551.0) Photosystem II stability/assembly factor HCF136, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|38720 : 231.0) no description available & (gnl|cdd|34127 : 228.0) no description available & (reliability: 1118.0) & (original description: Putative HCF136, Description = Photosystem II stability/assembly factor HCF136, chloroplastic, PFAM = PF14870)' T '1.1.1.3' 'PS.lightreaction.photosystem II.biogenesis' 'niben101scf03595_451388-460324' '(at5g23120 : 552.0) encodes a stability and/or assembly factor of photosystem II; HIGH CHLOROPHYLL FLUORESCENCE 136 (HCF136); INVOLVED IN: response to cadmium ion, plastid organization, protein complex assembly; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BNR repeat (InterPro:IPR002860), Photosystem II stability/assembly factor, HCF136 (InterPro:IPR016705), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5z5a8|p2saf_orysa : 543.0) Photosystem II stability/assembly factor HCF136, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|34127 : 232.0) no description available & (gnl|cdd|38720 : 230.0) no description available & (reliability: 1104.0) & (original description: Putative HCF136, Description = Photosystem II stability/assembly factor HCF136, chloroplastic, PFAM = PF14870)' T '1.1.1.3' 'PS.lightreaction.photosystem II.biogenesis' 'niben101scf07191_232290-237051' '(at5g23120 : 219.0) encodes a stability and/or assembly factor of photosystem II; HIGH CHLOROPHYLL FLUORESCENCE 136 (HCF136); INVOLVED IN: response to cadmium ion, plastid organization, protein complex assembly; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BNR repeat (InterPro:IPR002860), Photosystem II stability/assembly factor, HCF136 (InterPro:IPR016705), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5z5a8|p2saf_orysa : 216.0) Photosystem II stability/assembly factor HCF136, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|34127 : 96.3) no description available & (gnl|cdd|38720 : 80.4) no description available & (reliability: 438.0) & (original description: Putative ycf48, Description = Ycf48-like protein, PFAM = PF14870)' T '1.1.1.4' 'PS.lightreaction.photosystem II.LHC biogenesis' '' '' '1.1.2' 'PS.lightreaction.photosystem I' 'nbv0.3scaffold7765_33151-37573' '(at3g21740 : 367.0) ACCUMULATION OF PHOTOSYSTEM ONE 4; ACCUMULATION OF PHOTOSYSTEM ONE 4 (APO4); INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF794, plant (InterPro:IPR008512); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF794) (TAIR:AT5G57930.2); Has 163 Blast hits to 121 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 163; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69172 : 306.0) no description available & (reliability: 734.0) & (original description: Putative APO4, Description = APO protein 4, mitochondrial, PFAM = PF05634;PF05634)' T '1.1.2' 'PS.lightreaction.photosystem I' 'niben044scf00017951ctg002_22238-26599' '(at3g21740 : 366.0) ACCUMULATION OF PHOTOSYSTEM ONE 4; ACCUMULATION OF PHOTOSYSTEM ONE 4 (APO4); INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF794, plant (InterPro:IPR008512); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF794) (TAIR:AT5G57930.2); Has 163 Blast hits to 121 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 163; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69172 : 302.0) no description available & (reliability: 732.0) & (original description: Putative APO4, Description = APO protein 4, mitochondrial, PFAM = PF05634;PF05634)' T '1.1.2' 'PS.lightreaction.photosystem I' 'niben101scf09172_233920-238281' '(at3g21740 : 372.0) ACCUMULATION OF PHOTOSYSTEM ONE 4; ACCUMULATION OF PHOTOSYSTEM ONE 4 (APO4); INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF794, plant (InterPro:IPR008512); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF794) (TAIR:AT5G57930.2); Has 163 Blast hits to 121 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 163; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69172 : 308.0) no description available & (reliability: 744.0) & (original description: Putative APO4, Description = APO protein 4, mitochondrial, PFAM = PF05634;PF05634)' T '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'nbv0.3scaffold11673_250-4947' '(at1g34000 : 146.0) Encodes a novel member of the Lhc family from Arabidopsis with one predicted transmembrane alpha-helix closely related to helix I of Lhc protein from PSI (Lhca4). Gene expression is triggered by light stress and both transcript and protein accumulate in a light intensity-dependent manner. Ohp2 is associated with PSI under low- or high-light conditions.; one-helix protein 2 (OHP2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 171 Blast hits to 159 proteins in 56 species: Archae - 0; Bacteria - 5; Metazoa - 24; Fungi - 6; Plants - 64; Viruses - 16; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative OHP1, Description = One-helix protein 2, PFAM = )' T '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'nbv0.3scaffold23673_4802-8647' '(at3g54890 : 380.0) Encodes a component of the light harvesting complex associated with photosystem I.; photosystem I light harvesting complex gene 1 (LHCA1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, photosynthesis, light harvesting in photosystem I, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, chloroplast, plastoglobule, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT2G40100.1); Has 2134 Blast hits to 2063 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (gnl|cdd|84819 : 187.0) no description available & (p13851|cb21_sinal : 136.0) Chlorophyll a-b binding protein 1, chloroplast precursor (LHCII type I CAB-1) (LHCP) - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 760.0) & (original description: Putative CAB6A, Description = Chlorophyll a-b binding protein 6A, chloroplastic, PFAM = PF00504)' T '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'nbv0.3scaffold35045_1206-5369' '(at1g34000 : 158.0) Encodes a novel member of the Lhc family from Arabidopsis with one predicted transmembrane alpha-helix closely related to helix I of Lhc protein from PSI (Lhca4). Gene expression is triggered by light stress and both transcript and protein accumulate in a light intensity-dependent manner. Ohp2 is associated with PSI under low- or high-light conditions.; one-helix protein 2 (OHP2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 171 Blast hits to 159 proteins in 56 species: Archae - 0; Bacteria - 5; Metazoa - 24; Fungi - 6; Plants - 64; Viruses - 16; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative HLIP, Description = One-helix protein 2, PFAM = )' T '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'nbv0.3scaffold48685_11282-14779' '(at1g61520 : 380.0) PSI type III chlorophyll a/b-binding protein (Lhca3*1); photosystem I light harvesting complex gene 3 (LHCA3); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, plastoglobule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 5 (TAIR:AT1G45474.2). & (gnl|cdd|84819 : 151.0) no description available & (p13869|cb12_pethy : 130.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (reliability: 760.0) & (original description: Putative LHCA5, Description = Photosystem I chlorophyll a/b-binding protein 5, chloroplastic, PFAM = PF00504)' T '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'nbv0.5scaffold3918_63574-67653' '(at1g34000 : 162.0) Encodes a novel member of the Lhc family from Arabidopsis with one predicted transmembrane alpha-helix closely related to helix I of Lhc protein from PSI (Lhca4). Gene expression is triggered by light stress and both transcript and protein accumulate in a light intensity-dependent manner. Ohp2 is associated with PSI under low- or high-light conditions.; one-helix protein 2 (OHP2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 171 Blast hits to 159 proteins in 56 species: Archae - 0; Bacteria - 5; Metazoa - 24; Fungi - 6; Plants - 64; Viruses - 16; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative HLIP, Description = One-helix protein 2, PFAM = )' T '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben044scf00013757ctg011_1796-5875' '(at1g34000 : 164.0) Encodes a novel member of the Lhc family from Arabidopsis with one predicted transmembrane alpha-helix closely related to helix I of Lhc protein from PSI (Lhca4). Gene expression is triggered by light stress and both transcript and protein accumulate in a light intensity-dependent manner. Ohp2 is associated with PSI under low- or high-light conditions.; one-helix protein 2 (OHP2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 171 Blast hits to 159 proteins in 56 species: Archae - 0; Bacteria - 5; Metazoa - 24; Fungi - 6; Plants - 64; Viruses - 16; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative HLIP, Description = One-helix protein 2, PFAM = )' T '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben044scf00030289ctg011_1-3073' '(at1g19150 : 371.0) PSI type II chlorophyll a/b-binding protein (Lhca2*1) mRNA,; photosystem I light harvesting complex gene 6 (LHCA6); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 2 (TAIR:AT3G61470.1); Has 2345 Blast hits to 2241 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1989; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink). & (p13869|cb12_pethy : 297.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (gnl|cdd|84819 : 164.0) no description available & (reliability: 742.0) & (original description: Putative LHCA6, Description = Photosystem I chlorophyll a/b-binding protein 6, chloroplastic, PFAM = PF00504)' T '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf00063_1044366-1047592' '(at3g47470 : 445.0) Encodes a chlorophyll a/b-binding protein that is more similar to the PSI Cab proteins than the PSII cab proteins. The predicted protein is about 20 amino acids shorter than most known Cab proteins.; light-harvesting chlorophyll-protein complex I subunit A4 (LHCA4); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to karrikin, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 2 (TAIR:AT3G61470.1); Has 2336 Blast hits to 2249 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1967; Viruses - 0; Other Eukaryotes - 366 (source: NCBI BLink). & (p13869|cb12_pethy : 234.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (gnl|cdd|84819 : 164.0) no description available & (reliability: 890.0) & (original description: Putative cab, Description = Chlorophyll a-b binding protein, chloroplastic, PFAM = PF00504)' T '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf00245_356560-360656' '(at3g47470 : 424.0) Encodes a chlorophyll a/b-binding protein that is more similar to the PSI Cab proteins than the PSII cab proteins. The predicted protein is about 20 amino acids shorter than most known Cab proteins.; light-harvesting chlorophyll-protein complex I subunit A4 (LHCA4); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to karrikin, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 2 (TAIR:AT3G61470.1); Has 2336 Blast hits to 2249 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1967; Viruses - 0; Other Eukaryotes - 366 (source: NCBI BLink). & (p13869|cb12_pethy : 228.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (gnl|cdd|84819 : 157.0) no description available & (reliability: 848.0) & (original description: Putative cab, Description = Chlorophyll a-b binding protein, chloroplastic, PFAM = PF00504)' T '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf00406_358007-361819' '(at3g54890 : 382.0) Encodes a component of the light harvesting complex associated with photosystem I.; photosystem I light harvesting complex gene 1 (LHCA1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, photosynthesis, light harvesting in photosystem I, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, chloroplast, plastoglobule, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT2G40100.1); Has 2134 Blast hits to 2063 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (gnl|cdd|84819 : 188.0) no description available & (p13851|cb21_sinal : 137.0) Chlorophyll a-b binding protein 1, chloroplast precursor (LHCII type I CAB-1) (LHCP) - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 764.0) & (original description: Putative CAB6A, Description = Chlorophyll a-b binding protein 6A, chloroplastic, PFAM = PF00504)' T '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf00559_361340-366543' '(at1g34000 : 148.0) Encodes a novel member of the Lhc family from Arabidopsis with one predicted transmembrane alpha-helix closely related to helix I of Lhc protein from PSI (Lhca4). Gene expression is triggered by light stress and both transcript and protein accumulate in a light intensity-dependent manner. Ohp2 is associated with PSI under low- or high-light conditions.; one-helix protein 2 (OHP2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 171 Blast hits to 159 proteins in 56 species: Archae - 0; Bacteria - 5; Metazoa - 24; Fungi - 6; Plants - 64; Viruses - 16; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative OHP1, Description = One-helix protein 2, PFAM = )' T '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf01276_19534-23971' '(at3g54890 : 397.0) Encodes a component of the light harvesting complex associated with photosystem I.; photosystem I light harvesting complex gene 1 (LHCA1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, photosynthesis, light harvesting in photosystem I, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, chloroplast, plastoglobule, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT2G40100.1); Has 2134 Blast hits to 2063 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (gnl|cdd|84819 : 190.0) no description available & (p13851|cb21_sinal : 140.0) Chlorophyll a-b binding protein 1, chloroplast precursor (LHCII type I CAB-1) (LHCP) - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 794.0) & (original description: Putative CAB6A, Description = Chlorophyll a-b binding protein 6A, chloroplastic, PFAM = PF00504)' T '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf01328_108473-112301' '(at1g61520 : 401.0) PSI type III chlorophyll a/b-binding protein (Lhca3*1); photosystem I light harvesting complex gene 3 (LHCA3); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, plastoglobule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 5 (TAIR:AT1G45474.2). & (gnl|cdd|84819 : 153.0) no description available & (p13869|cb12_pethy : 144.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (reliability: 802.0) & (original description: Putative CAB8, Description = Chlorophyll a-b binding protein 8, chloroplastic, PFAM = PF00504)' T '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf01453_504752-508915' '(at1g34000 : 159.0) Encodes a novel member of the Lhc family from Arabidopsis with one predicted transmembrane alpha-helix closely related to helix I of Lhc protein from PSI (Lhca4). Gene expression is triggered by light stress and both transcript and protein accumulate in a light intensity-dependent manner. Ohp2 is associated with PSI under low- or high-light conditions.; one-helix protein 2 (OHP2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 171 Blast hits to 159 proteins in 56 species: Archae - 0; Bacteria - 5; Metazoa - 24; Fungi - 6; Plants - 64; Viruses - 16; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative HLIP, Description = One-helix protein 2, PFAM = )' T '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf02351_731065-734530' '(at1g61520 : 392.0) PSI type III chlorophyll a/b-binding protein (Lhca3*1); photosystem I light harvesting complex gene 3 (LHCA3); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, plastoglobule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 5 (TAIR:AT1G45474.2). & (gnl|cdd|84819 : 152.0) no description available & (p13869|cb12_pethy : 131.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (reliability: 784.0) & (original description: Putative CAB8, Description = Chlorophyll a-b binding protein 8, chloroplastic, PFAM = PF00504)' T '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf05063_534531-539829' '(at1g19150 : 380.0) PSI type II chlorophyll a/b-binding protein (Lhca2*1) mRNA,; photosystem I light harvesting complex gene 6 (LHCA6); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 2 (TAIR:AT3G61470.1); Has 2345 Blast hits to 2241 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1989; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink). & (p13869|cb12_pethy : 305.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (gnl|cdd|84819 : 166.0) no description available & (reliability: 760.0) & (original description: Putative LHCA6, Description = Photosystem I chlorophyll a/b-binding protein 6, chloroplastic, PFAM = PF00504)' T '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf05621_946434-950152' '(p13869|cb12_pethy : 431.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (at3g61470 : 387.0) Encodes a component of the light harvesting antenna complex of photosystem I.; photosystem I light harvesting complex gene 2 (LHCA2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting in photosystem I, photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 6 (TAIR:AT1G19150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84819 : 168.0) no description available & (reliability: 774.0) & (original description: Putative CAB7, Description = Chlorophyll a-b binding protein 7, chloroplastic, PFAM = PF00504)' T '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf05950_20039-23458' '(p13869|cb12_pethy : 278.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (at3g61470 : 233.0) Encodes a component of the light harvesting antenna complex of photosystem I.; photosystem I light harvesting complex gene 2 (LHCA2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting in photosystem I, photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 6 (TAIR:AT1G19150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84819 : 84.5) no description available & (reliability: 466.0) & (original description: Putative cab, Description = Chlorophyll a-b binding protein, chloroplastic, PFAM = PF00504;PF00504)' T '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf07631_65587-69666' '(at1g34000 : 160.0) Encodes a novel member of the Lhc family from Arabidopsis with one predicted transmembrane alpha-helix closely related to helix I of Lhc protein from PSI (Lhca4). Gene expression is triggered by light stress and both transcript and protein accumulate in a light intensity-dependent manner. Ohp2 is associated with PSI under low- or high-light conditions.; one-helix protein 2 (OHP2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 171 Blast hits to 159 proteins in 56 species: Archae - 0; Bacteria - 5; Metazoa - 24; Fungi - 6; Plants - 64; Viruses - 16; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative HLIP, Description = One-helix protein 2, PFAM = )' T '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf11767_90178-93023' '(at1g61520 : 385.0) PSI type III chlorophyll a/b-binding protein (Lhca3*1); photosystem I light harvesting complex gene 3 (LHCA3); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, plastoglobule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 5 (TAIR:AT1G45474.2). & (gnl|cdd|84819 : 151.0) no description available & (p13869|cb12_pethy : 130.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (reliability: 770.0) & (original description: Putative CAB8, Description = Chlorophyll a-b binding protein 8, chloroplastic, PFAM = PF00504)' T '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'niben101scf25021_119982-123082' '(at1g45474 : 300.0) Encodes a component of the light harvesting complex of photosystem I.; photosystem I light harvesting complex gene 5 (LHCA5); FUNCTIONS IN: pigment binding; INVOLVED IN: photosynthesis, light harvesting in photosystem I, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, photosystem I antenna complex, chloroplast, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light-harvesting chlorophyll-protein complex I subunit A4 (TAIR:AT3G47470.1); Has 2339 Blast hits to 2263 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2004; Viruses - 0; Other Eukaryotes - 331 (source: NCBI BLink). & (gnl|cdd|84819 : 152.0) no description available & (p13869|cb12_pethy : 139.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (reliability: 600.0) & (original description: Putative LHCA5, Description = Photosystem I chlorophyll a/b-binding protein 5, chloroplastic, PFAM = PF00504)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'nbv0.3scaffold15025_1-3534' '(p12355|psaf_spiol : 292.0) Photosystem I reaction center subunit III, chloroplast precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) - Spinacia oleracea (Spinach) & (at1g31330 : 286.0) Encodes subunit F of photosystem I.; photosystem I subunit F (PSAF); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre protein PsaF, subunit III (InterPro:IPR003666); Has 387 Blast hits to 387 proteins in 119 species: Archae - 0; Bacteria - 139; Metazoa - 0; Fungi - 0; Plants - 79; Viruses - 6; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|86009 : 283.0) no description available & (reliability: 572.0) & (original description: Putative PSAF, Description = Photosystem I reaction center subunit III, chloroplastic, PFAM = PF02507)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'nbv0.3scaffold15057_390-2893' '(q41229|psaeb_nicsy : 159.0) Photosystem I reaction center subunit IV B, chloroplast precursor (PSI-E B) [Contains: Photosystem I reaction center subunit IV B isoform 2] - Nicotiana sylvestris (Wood tobacco) & (at2g20260 : 102.0) Encodes subunit E of photosystem I.; photosystem I subunit E-2 (PSAE-2); FUNCTIONS IN: catalytic activity; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, photosystem I reaction center; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit IV/PsaE (InterPro:IPR003375), Electron transport accessory protein (InterPro:IPR008990); BEST Arabidopsis thaliana protein match is: Photosystem I reaction centre subunit IV / PsaE protein (TAIR:AT4G28750.1); Has 441 Blast hits to 441 proteins in 130 species: Archae - 0; Bacteria - 177; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 3; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|66144 : 92.7) no description available & (reliability: 204.0) & (original description: Putative PSAEB, Description = Photosystem I reaction center subunit IV B, chloroplastic, PFAM = PF02427)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'nbv0.3scaffold35852_18315-21245' '(at1g08380 : 192.0) Encodes subunit O of photosystem I.; photosystem I subunit O (PSAO); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress, photosynthesis, light harvesting in photosystem I; LOCATED IN: thylakoid, photosystem I, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I PsaO (InterPro:IPR017498); Has 161 Blast hits to 161 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative PSAO, Description = Photosystem I subunit O, PFAM = )' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'nbv0.3scaffold50894_1270-4493' '(q41228|psaea_nicsy : 164.0) Photosystem I reaction center subunit IV A, chloroplast precursor (PSI-E A) [Contains: Photosystem I reaction center subunit IV A isoform 2] - Nicotiana sylvestris (Wood tobacco) & (at2g20260 : 110.0) Encodes subunit E of photosystem I.; photosystem I subunit E-2 (PSAE-2); FUNCTIONS IN: catalytic activity; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, photosystem I reaction center; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit IV/PsaE (InterPro:IPR003375), Electron transport accessory protein (InterPro:IPR008990); BEST Arabidopsis thaliana protein match is: Photosystem I reaction centre subunit IV / PsaE protein (TAIR:AT4G28750.1); Has 441 Blast hits to 441 proteins in 130 species: Archae - 0; Bacteria - 177; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 3; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|66144 : 92.7) no description available & (reliability: 220.0) & (original description: Putative PSAEA, Description = Photosystem I reaction center subunit IV A, chloroplastic, PFAM = PF02427)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'nbv0.3scaffold96361_1-3433' '(at1g30380 : 166.0) Encodes subunit K of photosystem I reaction center.; photosystem I subunit K (PSAK); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, photosystem I, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I PsaG/PsaK protein (InterPro:IPR000549), Photosystem I reaction centre, PsaK, plant (InterPro:IPR017493), Photosystem I reaction centre, PsaG/PsaK, plant (InterPro:IPR016370); Has 85 Blast hits to 85 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q9zt05|psak_medsa : 152.0) Photosystem I reaction center subunit psaK, chloroplast precursor (Photosystem I subunit X) (PSI-K) - Medicago sativa (Alfalfa) & (gnl|cdd|85330 : 82.7) no description available & (reliability: 332.0) & (original description: Putative psaK, Description = Photosystem I reaction center subunit psaK, chloroplastic, PFAM = PF01241)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'nbv0.5scaffold206_679328-682965' '(p12355|psaf_spiol : 288.0) Photosystem I reaction center subunit III, chloroplast precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) - Spinacia oleracea (Spinach) & (at1g31330 : 282.0) Encodes subunit F of photosystem I.; photosystem I subunit F (PSAF); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre protein PsaF, subunit III (InterPro:IPR003666); Has 387 Blast hits to 387 proteins in 119 species: Archae - 0; Bacteria - 139; Metazoa - 0; Fungi - 0; Plants - 79; Viruses - 6; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|86009 : 282.0) no description available & (reliability: 564.0) & (original description: Putative PSAF, Description = Photosystem I reaction center subunit III, chloroplastic, PFAM = PF02507)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'nbv0.5scaffold218_782944-787504' '(at2g46820 : 100.0) Encodes the P subunit of Photosystem I. About 25% of the TMP14 pool appeared to be phosphorylated, and this ratio is not affected by light. Contains seven phosphorylation sites on threonine residue and chloroplast targeting signal. Located in the proximity of PSI-L, -H and -O subunits.; photosystem I P subunit (PSI-P); FUNCTIONS IN: DNA binding; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52220.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative PSAP, Description = Thylakoid membrane phosphoprotein 14 kDa, PFAM = PF14159)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'nbv0.5scaffold4167_63985-67827' '(at4g12800 : 280.0) Encodes subunit L of photosystem I reaction center.; photosystem I subunit l (PSAL); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis, light reaction, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre, subunit XI PsaL (InterPro:IPR003757); Has 443 Blast hits to 443 proteins in 121 species: Archae - 0; Bacteria - 178; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (q41385|psal_spiol : 279.0) Photosystem I reaction center subunit XI, chloroplast precursor (PSI-L) (PSI subunit V) - Spinacia oleracea (Spinach) & (gnl|cdd|86048 : 216.0) no description available & (reliability: 560.0) & (original description: Putative PSAL, Description = Photosystem I reaction center subunit XI, chloroplastic, PFAM = PF02605)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'nbv0.5scaffold10418_3535-6442' '(p06407|psab_tobac : 595.0) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB) (PSI-B) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79272 : 590.0) no description available & (atcg00340 : 585.0) Encodes the D1 subunit of photosystem I and II reaction centers.; PSAB; FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting in photosystem II, photosynthesis, light harvesting in photosystem I; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I psaB (InterPro:IPR006244), Photosystem I, PsaA/PsaB (InterPro:IPR001280), Photosystem I psaA/psaB, conserved site (InterPro:IPR020586); BEST Arabidopsis thaliana protein match is: Photosystem I, PsaA/PsaB protein (TAIR:ATCG00350.1). & (reliability: 1170.0) & (original description: Putative psaB, Description = PsaB, PFAM = PF00223)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben044scf00003217ctg003_5093-7533' '(at1g55670 : 187.0) Encodes subunit G of photosystem I, an 11-kDa membrane protein that plays an important role in electron transport between plastocyanin and PSI and is involved in the stability of the PSI complex. PSI-G subunit is bound to PSI-B and is in contact with Lhca1. The protein inserts into thylakoids by a direct or "spontaneous" pathway that does not involve the activities of any known chloroplast protein-targeting machinery. PSI-G appears to be directly or indirectly involved in the interaction between Photosystem I and plastocyanin.; photosystem I subunit G (PSAG); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthetic NADP+ reduction, photosystem I stabilization, protein stabilization, photosynthetic electron transport in photosystem I, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre, PsaG, plant (InterPro:IPR017494), Photosystem I PsaG/PsaK protein (InterPro:IPR000549), Photosystem I reaction centre, PsaG/PsaK, plant (InterPro:IPR016370); Has 117 Blast hits to 117 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p12357|psag_spiol : 180.0) Photosystem I reaction center subunit V, chloroplast precursor (PSI-G) (Photosystem I 9 kDa protein) - Spinacia oleracea (Spinach) & (gnl|cdd|85330 : 93.1) no description available & (reliability: 374.0) & (original description: Putative PSAG, Description = Photosystem I reaction center subunit V, chloroplastic, PFAM = PF01241)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben044scf00007972ctg038_1-2772' '(gnl|cdd|66888 : 213.0) no description available & (o04006|psah_brara : 157.0) Photosystem I reaction center subunit VI, chloroplast precursor (PSI-H) (Light-harvesting complex I 11 kDa protein) - Brassica rapa (Turnip) & (at3g16140 : 154.0) Encodes subunit H of photosystem I reaction center subunit VI.; photosystem I subunit H-1 (PSAH-1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast thylakoid membrane, chloroplast, photosystem I reaction center; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit VI (InterPro:IPR004928); BEST Arabidopsis thaliana protein match is: photosystem I subunit H2 (TAIR:AT1G52230.1); Has 102 Blast hits to 102 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative PSAH2, Description = Photosystem I reaction center subunit VI-2, chloroplastic, PFAM = PF03244)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben044scf00009051ctg001_1-3374' '(p12355|psaf_spiol : 289.0) Photosystem I reaction center subunit III, chloroplast precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) - Spinacia oleracea (Spinach) & (at1g31330 : 283.0) Encodes subunit F of photosystem I.; photosystem I subunit F (PSAF); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre protein PsaF, subunit III (InterPro:IPR003666); Has 387 Blast hits to 387 proteins in 119 species: Archae - 0; Bacteria - 139; Metazoa - 0; Fungi - 0; Plants - 79; Viruses - 6; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|86009 : 282.0) no description available & (reliability: 566.0) & (original description: Putative PSAF, Description = Photosystem I reaction center subunit III, chloroplastic, PFAM = PF02507)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben044scf00010384ctg020_12013-16402' '(at2g46820 : 134.0) Encodes the P subunit of Photosystem I. About 25% of the TMP14 pool appeared to be phosphorylated, and this ratio is not affected by light. Contains seven phosphorylation sites on threonine residue and chloroplast targeting signal. Located in the proximity of PSI-L, -H and -O subunits.; photosystem I P subunit (PSI-P); FUNCTIONS IN: DNA binding; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52220.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative CURT1B, Description = Protein CURVATURE THYLAKOID 1B, chloroplastic, PFAM = PF14159)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben044scf00028915ctg002_439-4387' '(q41385|psal_spiol : 285.0) Photosystem I reaction center subunit XI, chloroplast precursor (PSI-L) (PSI subunit V) - Spinacia oleracea (Spinach) & (at4g12800 : 284.0) Encodes subunit L of photosystem I reaction center.; photosystem I subunit l (PSAL); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis, light reaction, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre, subunit XI PsaL (InterPro:IPR003757); Has 443 Blast hits to 443 proteins in 121 species: Archae - 0; Bacteria - 178; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|86048 : 215.0) no description available & (reliability: 568.0) & (original description: Putative PSAL, Description = Photosystem I reaction center subunit XI, chloroplastic, PFAM = PF02605)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben044scf00038432ctg000_5756-8996' '(q41228|psaea_nicsy : 164.0) Photosystem I reaction center subunit IV A, chloroplast precursor (PSI-E A) [Contains: Photosystem I reaction center subunit IV A isoform 2] - Nicotiana sylvestris (Wood tobacco) & (at2g20260 : 110.0) Encodes subunit E of photosystem I.; photosystem I subunit E-2 (PSAE-2); FUNCTIONS IN: catalytic activity; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, photosystem I reaction center; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit IV/PsaE (InterPro:IPR003375), Electron transport accessory protein (InterPro:IPR008990); BEST Arabidopsis thaliana protein match is: Photosystem I reaction centre subunit IV / PsaE protein (TAIR:AT4G28750.1); Has 441 Blast hits to 441 proteins in 130 species: Archae - 0; Bacteria - 177; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 3; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|66144 : 92.3) no description available & (reliability: 220.0) & (original description: Putative PSAEA, Description = Photosystem I reaction center subunit IV A, chloroplastic, PFAM = PF02427)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf00271_394312-396638' '(p12355|psaf_spiol : 207.0) Photosystem I reaction center subunit III, chloroplast precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) - Spinacia oleracea (Spinach) & (at1g31330 : 195.0) Encodes subunit F of photosystem I.; photosystem I subunit F (PSAF); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre protein PsaF, subunit III (InterPro:IPR003666); Has 387 Blast hits to 387 proteins in 119 species: Archae - 0; Bacteria - 139; Metazoa - 0; Fungi - 0; Plants - 79; Viruses - 6; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|86009 : 193.0) no description available & (reliability: 390.0) & (original description: Putative psaF, Description = Photosystem I reaction center subunit III, PFAM = PF02507)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf00271_396316-399223' '(p12355|psaf_spiol : 293.0) Photosystem I reaction center subunit III, chloroplast precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) - Spinacia oleracea (Spinach) & (gnl|cdd|86009 : 282.0) no description available & (at1g31330 : 280.0) Encodes subunit F of photosystem I.; photosystem I subunit F (PSAF); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre protein PsaF, subunit III (InterPro:IPR003666); Has 387 Blast hits to 387 proteins in 119 species: Archae - 0; Bacteria - 139; Metazoa - 0; Fungi - 0; Plants - 79; Viruses - 6; Other Eukaryotes - 163 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative PSAF, Description = Photosystem I reaction center subunit III, chloroplastic, PFAM = PF02507)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf00597_619227-622450' '(q41228|psaea_nicsy : 149.0) Photosystem I reaction center subunit IV A, chloroplast precursor (PSI-E A) [Contains: Photosystem I reaction center subunit IV A isoform 2] - Nicotiana sylvestris (Wood tobacco) & (at2g20260 : 111.0) Encodes subunit E of photosystem I.; photosystem I subunit E-2 (PSAE-2); FUNCTIONS IN: catalytic activity; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, photosystem I reaction center; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit IV/PsaE (InterPro:IPR003375), Electron transport accessory protein (InterPro:IPR008990); BEST Arabidopsis thaliana protein match is: Photosystem I reaction centre subunit IV / PsaE protein (TAIR:AT4G28750.1); Has 441 Blast hits to 441 proteins in 130 species: Archae - 0; Bacteria - 177; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 3; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|66144 : 93.8) no description available & (reliability: 222.0) & (original description: Putative PSAEA, Description = Photosystem I reaction center subunit IV A, chloroplastic, PFAM = PF02427)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf00851_152847-158796' '(at1g08380 : 189.0) Encodes subunit O of photosystem I.; photosystem I subunit O (PSAO); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress, photosynthesis, light harvesting in photosystem I; LOCATED IN: thylakoid, photosystem I, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I PsaO (InterPro:IPR017498); Has 161 Blast hits to 161 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative PSAO, Description = Photosystem I subunit O, PFAM = )' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf01147_113003-127450' '(gnl|cdd|66888 : 213.0) no description available & (p22179|psah_spiol : 149.0) Photosystem I reaction center subunit VI, chloroplast precursor (PSI-H) (Light-harvesting complex I 11 kDa protein) - Spinacia oleracea (Spinach) & (at1g52230 : 144.0) photosystem I subunit H2 (PSAH2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit VI (InterPro:IPR004928); BEST Arabidopsis thaliana protein match is: photosystem I subunit H-1 (TAIR:AT3G16140.1); Has 102 Blast hits to 102 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative PSAH, Description = Photosystem I reaction center subunit VI, chloroplastic, PFAM = PF03244)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf02147_33037-37453' '(p29302|psad_nicsy : 340.0) Photosystem I reaction center subunit II, chloroplast precursor (Photosystem I 20 kDa subunit) (PSI-D) - Nicotiana sylvestris (Wood tobacco) & (at4g02770 : 267.0) Encodes a protein predicted by sequence similarity with spinach PsaD to be photosystem I reaction center subunit II (PsaD1); photosystem I subunit D-1 (PSAD-1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I protein PsaD (InterPro:IPR003685); BEST Arabidopsis thaliana protein match is: photosystem I subunit D-2 (TAIR:AT1G03130.1); Has 510 Blast hits to 510 proteins in 137 species: Archae - 0; Bacteria - 143; Metazoa - 0; Fungi - 0; Plants - 166; Viruses - 3; Other Eukaryotes - 198 (source: NCBI BLink). & (gnl|cdd|86016 : 233.0) no description available & (reliability: 534.0) & (original description: Putative psaD, Description = Photosystem I reaction center subunit II, chloroplastic, PFAM = PF02531)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf02147_184557-187831' '(p29302|psad_nicsy : 202.0) Photosystem I reaction center subunit II, chloroplast precursor (Photosystem I 20 kDa subunit) (PSI-D) - Nicotiana sylvestris (Wood tobacco) & (at4g02770 : 189.0) Encodes a protein predicted by sequence similarity with spinach PsaD to be photosystem I reaction center subunit II (PsaD1); photosystem I subunit D-1 (PSAD-1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I protein PsaD (InterPro:IPR003685); BEST Arabidopsis thaliana protein match is: photosystem I subunit D-2 (TAIR:AT1G03130.1); Has 510 Blast hits to 510 proteins in 137 species: Archae - 0; Bacteria - 143; Metazoa - 0; Fungi - 0; Plants - 166; Viruses - 3; Other Eukaryotes - 198 (source: NCBI BLink). & (gnl|cdd|86016 : 177.0) no description available & (reliability: 378.0) & (original description: Putative psaD, Description = Photosystem I reaction center subunit II, PFAM = PF02531)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf02293_317717-320157' '(at1g55670 : 193.0) Encodes subunit G of photosystem I, an 11-kDa membrane protein that plays an important role in electron transport between plastocyanin and PSI and is involved in the stability of the PSI complex. PSI-G subunit is bound to PSI-B and is in contact with Lhca1. The protein inserts into thylakoids by a direct or "spontaneous" pathway that does not involve the activities of any known chloroplast protein-targeting machinery. PSI-G appears to be directly or indirectly involved in the interaction between Photosystem I and plastocyanin.; photosystem I subunit G (PSAG); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthetic NADP+ reduction, photosystem I stabilization, protein stabilization, photosynthetic electron transport in photosystem I, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre, PsaG, plant (InterPro:IPR017494), Photosystem I PsaG/PsaK protein (InterPro:IPR000549), Photosystem I reaction centre, PsaG/PsaK, plant (InterPro:IPR016370); Has 117 Blast hits to 117 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p12357|psag_spiol : 183.0) Photosystem I reaction center subunit V, chloroplast precursor (PSI-G) (Photosystem I 9 kDa protein) - Spinacia oleracea (Spinach) & (gnl|cdd|85330 : 93.1) no description available & (reliability: 386.0) & (original description: Putative PSAG, Description = Photosystem I reaction center subunit V, chloroplastic, PFAM = PF01241)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf03263_246169-249069' '(q41228|psaea_nicsy : 108.0) Photosystem I reaction center subunit IV A, chloroplast precursor (PSI-E A) [Contains: Photosystem I reaction center subunit IV A isoform 2] - Nicotiana sylvestris (Wood tobacco) & (at2g20260 : 105.0) Encodes subunit E of photosystem I.; photosystem I subunit E-2 (PSAE-2); FUNCTIONS IN: catalytic activity; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, photosystem I reaction center; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit IV/PsaE (InterPro:IPR003375), Electron transport accessory protein (InterPro:IPR008990); BEST Arabidopsis thaliana protein match is: Photosystem I reaction centre subunit IV / PsaE protein (TAIR:AT4G28750.1); Has 441 Blast hits to 441 proteins in 130 species: Archae - 0; Bacteria - 177; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 3; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|66144 : 91.9) no description available & (reliability: 210.0) & (original description: Putative psaE, Description = Photosystem I reaction center subunit IV, PFAM = PF02427)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf03287_192760-197323' '(gnl|cdd|66888 : 210.0) no description available & (at1g52230 : 157.0) photosystem I subunit H2 (PSAH2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit VI (InterPro:IPR004928); BEST Arabidopsis thaliana protein match is: photosystem I subunit H-1 (TAIR:AT3G16140.1); Has 102 Blast hits to 102 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (o04006|psah_brara : 157.0) Photosystem I reaction center subunit VI, chloroplast precursor (PSI-H) (Light-harvesting complex I 11 kDa protein) - Brassica rapa (Turnip) & (reliability: 314.0) & (original description: Putative PSAH2, Description = Photosystem I reaction center subunit VI-2, chloroplastic, PFAM = PF03244)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf03733_357907-360347' '(at1g55670 : 189.0) Encodes subunit G of photosystem I, an 11-kDa membrane protein that plays an important role in electron transport between plastocyanin and PSI and is involved in the stability of the PSI complex. PSI-G subunit is bound to PSI-B and is in contact with Lhca1. The protein inserts into thylakoids by a direct or "spontaneous" pathway that does not involve the activities of any known chloroplast protein-targeting machinery. PSI-G appears to be directly or indirectly involved in the interaction between Photosystem I and plastocyanin.; photosystem I subunit G (PSAG); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthetic NADP+ reduction, photosystem I stabilization, protein stabilization, photosynthetic electron transport in photosystem I, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre, PsaG, plant (InterPro:IPR017494), Photosystem I PsaG/PsaK protein (InterPro:IPR000549), Photosystem I reaction centre, PsaG/PsaK, plant (InterPro:IPR016370); Has 117 Blast hits to 117 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p12357|psag_spiol : 180.0) Photosystem I reaction center subunit V, chloroplast precursor (PSI-G) (Photosystem I 9 kDa protein) - Spinacia oleracea (Spinach) & (gnl|cdd|85330 : 91.6) no description available & (reliability: 378.0) & (original description: Putative PSAG, Description = Photosystem I reaction center subunit V, chloroplastic, PFAM = PF01241)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf04172_230845-233348' '(q41229|psaeb_nicsy : 114.0) Photosystem I reaction center subunit IV B, chloroplast precursor (PSI-E B) [Contains: Photosystem I reaction center subunit IV B isoform 2] - Nicotiana sylvestris (Wood tobacco) & (at2g20260 : 104.0) Encodes subunit E of photosystem I.; photosystem I subunit E-2 (PSAE-2); FUNCTIONS IN: catalytic activity; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, photosystem I reaction center; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit IV/PsaE (InterPro:IPR003375), Electron transport accessory protein (InterPro:IPR008990); BEST Arabidopsis thaliana protein match is: Photosystem I reaction centre subunit IV / PsaE protein (TAIR:AT4G28750.1); Has 441 Blast hits to 441 proteins in 130 species: Archae - 0; Bacteria - 177; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 3; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|66144 : 91.5) no description available & (reliability: 208.0) & (original description: Putative PSAEB, Description = Photosystem I reaction center subunit IV B, chloroplastic, PFAM = PF02427)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf04494_126100-139402' '(gnl|cdd|66888 : 209.0) no description available & (p22179|psah_spiol : 155.0) Photosystem I reaction center subunit VI, chloroplast precursor (PSI-H) (Light-harvesting complex I 11 kDa protein) - Spinacia oleracea (Spinach) & (at1g52230 : 154.0) photosystem I subunit H2 (PSAH2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit VI (InterPro:IPR004928); BEST Arabidopsis thaliana protein match is: photosystem I subunit H-1 (TAIR:AT3G16140.1); Has 102 Blast hits to 102 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative PSAH, Description = Photosystem I reaction center subunit VI, chloroplastic, PFAM = PF03244)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf04569_149604-154802' '(at1g30380 : 162.0) Encodes subunit K of photosystem I reaction center.; photosystem I subunit K (PSAK); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, photosystem I, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I PsaG/PsaK protein (InterPro:IPR000549), Photosystem I reaction centre, PsaK, plant (InterPro:IPR017493), Photosystem I reaction centre, PsaG/PsaK, plant (InterPro:IPR016370); Has 85 Blast hits to 85 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q9zt05|psak_medsa : 147.0) Photosystem I reaction center subunit psaK, chloroplast precursor (Photosystem I subunit X) (PSI-K) - Medicago sativa (Alfalfa) & (gnl|cdd|85330 : 82.4) no description available & (reliability: 324.0) & (original description: Putative PSAK, Description = Photosystem I reaction center subunit psaK, chloroplastic, PFAM = PF01241)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf04964_38519-44936' '(p12355|psaf_spiol : 289.0) Photosystem I reaction center subunit III, chloroplast precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) - Spinacia oleracea (Spinach) & (at1g31330 : 284.0) Encodes subunit F of photosystem I.; photosystem I subunit F (PSAF); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre protein PsaF, subunit III (InterPro:IPR003666); Has 387 Blast hits to 387 proteins in 119 species: Archae - 0; Bacteria - 139; Metazoa - 0; Fungi - 0; Plants - 79; Viruses - 6; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|86009 : 281.0) no description available & (reliability: 568.0) & (original description: Putative PSAF, Description = Photosystem I reaction center subunit III, chloroplastic, PFAM = PF02507)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf05124_126989-127425' '(atcg01060 : 145.0) Encodes the PsaC subunit of photosystem I.; PSAC; FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, electron carrier activity, iron-sulfur cluster binding; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, photosystem I, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 4Fe-4S binding domain (InterPro:IPR001450), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), Photosystem I, PsaC (InterPro:IPR017491). & (p62094|psac_tobac : 143.0) Photosystem I iron-sulfur center (Photosystem I subunit VII) (9 kDa polypeptide) (PSI-C) (PsaC) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79282 : 141.0) no description available & (reliability: 290.0) & (original description: Putative psaC, Description = Photosystem I iron-sulfur center, PFAM = PF14697)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf05737_121825-124442' '(p29302|psad_nicsy : 342.0) Photosystem I reaction center subunit II, chloroplast precursor (Photosystem I 20 kDa subunit) (PSI-D) - Nicotiana sylvestris (Wood tobacco) & (at4g02770 : 262.0) Encodes a protein predicted by sequence similarity with spinach PsaD to be photosystem I reaction center subunit II (PsaD1); photosystem I subunit D-1 (PSAD-1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I protein PsaD (InterPro:IPR003685); BEST Arabidopsis thaliana protein match is: photosystem I subunit D-2 (TAIR:AT1G03130.1); Has 510 Blast hits to 510 proteins in 137 species: Archae - 0; Bacteria - 143; Metazoa - 0; Fungi - 0; Plants - 166; Viruses - 3; Other Eukaryotes - 198 (source: NCBI BLink). & (gnl|cdd|86016 : 232.0) no description available & (reliability: 524.0) & (original description: Putative psaD, Description = Photosystem I reaction center subunit II, chloroplastic, PFAM = PF02531)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf05824_1283011-1336304' '(at1g30380 : 166.0) Encodes subunit K of photosystem I reaction center.; photosystem I subunit K (PSAK); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, photosystem I, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I PsaG/PsaK protein (InterPro:IPR000549), Photosystem I reaction centre, PsaK, plant (InterPro:IPR017493), Photosystem I reaction centre, PsaG/PsaK, plant (InterPro:IPR016370); Has 85 Blast hits to 85 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q9zt05|psak_medsa : 152.0) Photosystem I reaction center subunit psaK, chloroplast precursor (Photosystem I subunit X) (PSI-K) - Medicago sativa (Alfalfa) & (gnl|cdd|85330 : 84.3) no description available & (reliability: 332.0) & (original description: Putative PSAK, Description = Photosystem I reaction center subunit psaK, chloroplastic, PFAM = PF01241)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf05961_238500-242254' '(q41385|psal_spiol : 285.0) Photosystem I reaction center subunit XI, chloroplast precursor (PSI-L) (PSI subunit V) - Spinacia oleracea (Spinach) & (at4g12800 : 284.0) Encodes subunit L of photosystem I reaction center.; photosystem I subunit l (PSAL); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis, light reaction, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre, subunit XI PsaL (InterPro:IPR003757); Has 443 Blast hits to 443 proteins in 121 species: Archae - 0; Bacteria - 178; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|86048 : 217.0) no description available & (reliability: 568.0) & (original description: Putative PSAL, Description = Photosystem I reaction center subunit XI, chloroplastic, PFAM = PF02605)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf06919_61156-65386' '(q41385|psal_spiol : 271.0) Photosystem I reaction center subunit XI, chloroplast precursor (PSI-L) (PSI subunit V) - Spinacia oleracea (Spinach) & (at4g12800 : 270.0) Encodes subunit L of photosystem I reaction center.; photosystem I subunit l (PSAL); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis, light reaction, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre, subunit XI PsaL (InterPro:IPR003757); Has 443 Blast hits to 443 proteins in 121 species: Archae - 0; Bacteria - 178; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|86048 : 216.0) no description available & (reliability: 540.0) & (original description: Putative PSAL, Description = Photosystem I reaction center subunit XI, chloroplastic, PFAM = PF02605)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf08515_120322-122772' '(at1g08380 : 196.0) Encodes subunit O of photosystem I.; photosystem I subunit O (PSAO); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress, photosynthesis, light harvesting in photosystem I; LOCATED IN: thylakoid, photosystem I, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I PsaO (InterPro:IPR017498); Has 161 Blast hits to 161 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative PSAO, Description = Photosystem I subunit O, PFAM = )' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf11670_130395-135469' '(at2g46820 : 135.0) Encodes the P subunit of Photosystem I. About 25% of the TMP14 pool appeared to be phosphorylated, and this ratio is not affected by light. Contains seven phosphorylation sites on threonine residue and chloroplast targeting signal. Located in the proximity of PSI-L, -H and -O subunits.; photosystem I P subunit (PSI-P); FUNCTIONS IN: DNA binding; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52220.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative CURT1B, Description = Protein CURVATURE THYLAKOID 1B, chloroplastic, PFAM = PF14159)' T '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'niben101scf17701_191832-195571' '(at5g64040 : 188.0) Encodes the only subunit of photosystem I located entirely in the thylakoid lumen. May be involved in the interaction between plastocyanin and the photosystem I complex.; PSAN; FUNCTIONS IN: calmodulin binding; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast thylakoid membrane, photosystem I, chloroplast thylakoid lumen, chloroplast, chloroplast photosystem I; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit N (InterPro:IPR008796); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69027 : 181.0) no description available & (o65107|psan_maize : 153.0) Photosystem I reaction center subunit N, chloroplast precursor (PSI-N) (Fragment) - Zea mays (Maize) & (reliability: 376.0) & (original description: Putative PSAN, Description = Photosystem I reaction center subunit N, chloroplastic, PFAM = PF05479)' T '1.1.2.3' 'PS.lightreaction.photosystem I.biogenesis' '' '' '1.1.3' 'PS.lightreaction.cytochrome b6/f' 'nbv0.3scaffold37864_15497-20024' '(at5g36120 : 144.0) "cofactor assembly, complex C (B6F)" (CCB3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome b6f complex assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function YGGT (InterPro:IPR003425); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative CCB3, Description = AtYLMG3, PFAM = PF02325)' T '1.1.3' 'PS.lightreaction.cytochrome b6/f' 'niben044scf00006261ctg013_282-2900' '(at2g26500 : 89.0) cytochrome b6f complex subunit (petM), putative; Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative petM, Description = Cytochrome b6-f complex subunit 7, PFAM = PF08041)' T '1.1.3' 'PS.lightreaction.cytochrome b6/f' 'niben101scf00372_361468-364085' '(at2g26500 : 89.7) cytochrome b6f complex subunit (petM), putative; Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative petM, Description = Cytochrome b6-f complex subunit 7, PFAM = PF08041)' T '1.1.3' 'PS.lightreaction.cytochrome b6/f' 'niben101scf03929_393987-398919' '(q02585|ucrib_tobac : 385.0) Cytochrome b6-f complex iron-sulfur subunit 2, chloroplast precursor (EC 1.10.99.1) (Rieske iron-sulfur protein 2) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein 2) (ISP 2) (RISP 2) - Nicotiana tabacum (Common toba & (at4g03280 : 298.0) Encodes the Rieske FeS center of cytochrome b6f complex. Gene is expressed in shoot but not in root. Mutant has reduced electron transport at saturating light intensities and Q-cycle activity is hypersensitive to acidification of the thylakoid lumen.; photosynthetic electron transfer C (PETC); FUNCTIONS IN: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity; INVOLVED IN: response to karrikin, defense response to bacterium, photosynthetic electron transport in cytochrome b6/f, nonphotochemical quenching; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Rieske iron-sulphur protein, C-terminal (InterPro:IPR005805), Cytochrome b6-f complex Fe-S subunit (InterPro:IPR014909), Rieske iron-sulphur protein (InterPro:IPR014349); BEST Arabidopsis thaliana protein match is: Ubiquinol-cytochrome C reductase iron-sulfur subunit (TAIR:AT5G13430.1); Has 5376 Blast hits to 5368 proteins in 1325 species: Archae - 24; Bacteria - 2829; Metazoa - 295; Fungi - 164; Plants - 410; Viruses - 0; Other Eukaryotes - 1654 (source: NCBI BLink). & (gnl|cdd|58541 : 241.0) no description available & (gnl|cdd|36884 : 152.0) no description available & (reliability: 596.0) & (original description: Putative petC1, Description = Cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic, PFAM = PF08802;PF00355)' T '1.1.3' 'PS.lightreaction.cytochrome b6/f' 'niben101scf08984_65614-71472' '(at5g36120 : 136.0) "cofactor assembly, complex C (B6F)" (CCB3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome b6f complex assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function YGGT (InterPro:IPR003425); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative CCB3, Description = Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic, PFAM = PF02325)' T '1.1.3' 'PS.lightreaction.cytochrome b6/f' 'niben101scf21348_360-5267' '(q02585|ucrib_tobac : 363.0) Cytochrome b6-f complex iron-sulfur subunit 2, chloroplast precursor (EC 1.10.99.1) (Rieske iron-sulfur protein 2) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein 2) (ISP 2) (RISP 2) - Nicotiana tabacum (Common toba & (at4g03280 : 289.0) Encodes the Rieske FeS center of cytochrome b6f complex. Gene is expressed in shoot but not in root. Mutant has reduced electron transport at saturating light intensities and Q-cycle activity is hypersensitive to acidification of the thylakoid lumen.; photosynthetic electron transfer C (PETC); FUNCTIONS IN: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity; INVOLVED IN: response to karrikin, defense response to bacterium, photosynthetic electron transport in cytochrome b6/f, nonphotochemical quenching; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Rieske iron-sulphur protein, C-terminal (InterPro:IPR005805), Cytochrome b6-f complex Fe-S subunit (InterPro:IPR014909), Rieske iron-sulphur protein (InterPro:IPR014349); BEST Arabidopsis thaliana protein match is: Ubiquinol-cytochrome C reductase iron-sulfur subunit (TAIR:AT5G13430.1); Has 5376 Blast hits to 5368 proteins in 1325 species: Archae - 24; Bacteria - 2829; Metazoa - 295; Fungi - 164; Plants - 410; Viruses - 0; Other Eukaryotes - 1654 (source: NCBI BLink). & (gnl|cdd|58541 : 240.0) no description available & (gnl|cdd|36884 : 151.0) no description available & (reliability: 578.0) & (original description: Putative petC1, Description = Cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic, PFAM = PF00355;PF08802)' T '1.1.3.1' 'PS.lightreaction.cytochrome b6/f.iron sulfur subunit' '' '' '1.1.3.2' 'PS.lightreaction.cytochrome b6/f.subunit 4 (PETD)' '' '' '1.1.3.3' 'PS.lightreaction.cytochrome b6/f.cytochrome b6 (CYB6)' 'nbv0.3scaffold118912_352-2250' '(gnl|cdd|79287 : 304.0) no description available & (q8s8w0|cyb6_atrbe : 303.0) Cytochrome b6 - Atropa belladonna (Belladonna) (Deadly nightshade) & (atcg00720 : 298.0) Encodes the cytochrome b(6) subunit of the cytochrome b6f complex.; photosynthetic electron transfer B (PETB); FUNCTIONS IN: heme binding; INVOLVED IN: photosynthesis, light reaction; LOCATED IN: thylakoid, chloroplast thylakoid membrane, cytochrome b6f complex, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b/b6 (InterPro:IPR016175), Di-haem cytochrome, transmembrane (InterPro:IPR016174), Cytochrome b/b6, N-terminal (InterPro:IPR005797); BEST Arabidopsis thaliana protein match is: apocytochrome b (TAIR:ATMG00220.1). & (gnl|cdd|39862 : 189.0) no description available & (reliability: 596.0) & (original description: Putative petB, Description = Cytochrome b6, PFAM = PF00033)' T '1.1.3.3' 'PS.lightreaction.cytochrome b6/f.cytochrome b6 (CYB6)' 'nbv0.5scaffold3349_257307-260110' '(gnl|cdd|79287 : 415.0) no description available & (q8s8w0|cyb6_atrbe : 408.0) Cytochrome b6 - Atropa belladonna (Belladonna) (Deadly nightshade) & (atcg00720 : 403.0) Encodes the cytochrome b(6) subunit of the cytochrome b6f complex.; photosynthetic electron transfer B (PETB); FUNCTIONS IN: heme binding; INVOLVED IN: photosynthesis, light reaction; LOCATED IN: thylakoid, chloroplast thylakoid membrane, cytochrome b6f complex, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b/b6 (InterPro:IPR016175), Di-haem cytochrome, transmembrane (InterPro:IPR016174), Cytochrome b/b6, N-terminal (InterPro:IPR005797); BEST Arabidopsis thaliana protein match is: apocytochrome b (TAIR:ATMG00220.1). & (gnl|cdd|39862 : 246.0) no description available & (reliability: 806.0) & (original description: Putative petB, Description = Cytochrome b6, PFAM = PF00737;PF00033)' T '1.1.3.3' 'PS.lightreaction.cytochrome b6/f.cytochrome b6 (CYB6)' 'niben101scf00683_466265-468894' '(gnl|cdd|79287 : 311.0) no description available & (q8s8w0|cyb6_atrbe : 307.0) Cytochrome b6 - Atropa belladonna (Belladonna) (Deadly nightshade) & (atcg00720 : 302.0) Encodes the cytochrome b(6) subunit of the cytochrome b6f complex.; photosynthetic electron transfer B (PETB); FUNCTIONS IN: heme binding; INVOLVED IN: photosynthesis, light reaction; LOCATED IN: thylakoid, chloroplast thylakoid membrane, cytochrome b6f complex, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b/b6 (InterPro:IPR016175), Di-haem cytochrome, transmembrane (InterPro:IPR016174), Cytochrome b/b6, N-terminal (InterPro:IPR005797); BEST Arabidopsis thaliana protein match is: apocytochrome b (TAIR:ATMG00220.1). & (gnl|cdd|39862 : 196.0) no description available & (reliability: 604.0) & (original description: Putative petB, Description = Cytochrome b6, PFAM = PF00033)' T '1.1.3.4' 'PS.lightreaction.cytochrome b6/f.apocytochrome f (CYF)' 'niben101scf11178_178869-180375' '(p06449|cyf_tobac : 624.0) Apocytochrome f precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79255 : 622.0) no description available & (atcg00540 : 579.0) Encodes cytochrome f apoprotein; involved in photosynthetic electron transport chain; encoded by the chloroplast genome and is transcriptionally repressed by a nuclear gene HCF2.; photosynthetic electron transfer A (PETA); FUNCTIONS IN: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity; INVOLVED IN: photosynthetic electron transport in cytochrome b6/f; LOCATED IN: thylakoid, chloroplast thylakoid membrane, cytochrome b6f complex, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome f (InterPro:IPR002325), Rudiment single hybrid motif (InterPro:IPR011054). & (reliability: 1158.0) & (original description: Putative petA, Description = Cytochrome f, PFAM = PF16639;PF01333)' T '1.1.3.5' 'PS.lightreaction.cytochrome b6/f.biogenesis' '' '' '1.1.4' 'PS.lightreaction.ATP synthase' 'nbv0.5scaffold81_1229883-1236777' '(at2g31040 : 342.0) ATP synthase protein I -related; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 182 Blast hits to 182 proteins in 74 species: Archae - 0; Bacteria - 104; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 2; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 684.0) & (original description: Putative At2g31040, Description = ATP synthase protein I-related protein, PFAM = )' T '1.1.4' 'PS.lightreaction.ATP synthase' 'nbv0.5scaffold2837_72072-81292' '(at2g31040 : 365.0) ATP synthase protein I -related; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 182 Blast hits to 182 proteins in 74 species: Archae - 0; Bacteria - 104; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 2; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 730.0) & (original description: Putative At2g31040, Description = ATP synthase protein I-related protein, PFAM = )' T '1.1.4' 'PS.lightreaction.ATP synthase' 'niben044scf00001403ctg016_263-4504' '(at2g31040 : 237.0) ATP synthase protein I -related; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 182 Blast hits to 182 proteins in 74 species: Archae - 0; Bacteria - 104; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 2; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 474.0) & (original description: Putative At2g31040, Description = ATP synthase protein I-related protein, PFAM = )' T '1.1.4' 'PS.lightreaction.ATP synthase' 'niben044scf00014776ctg006_4387-14599' '(at2g31040 : 359.0) ATP synthase protein I -related; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 182 Blast hits to 182 proteins in 74 species: Archae - 0; Bacteria - 104; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 2; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 718.0) & (original description: Putative At2g31040, Description = ATP synthase protein I-related protein, PFAM = )' T '1.1.4' 'PS.lightreaction.ATP synthase' 'niben101scf03487_59285-66179' '(at2g31040 : 358.0) ATP synthase protein I -related; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 182 Blast hits to 182 proteins in 74 species: Archae - 0; Bacteria - 104; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 2; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 716.0) & (original description: Putative At2g31040, Description = ATP synthase protein I-related protein, PFAM = )' T '1.1.4' 'PS.lightreaction.ATP synthase' 'niben101scf09559_147615-157776' '(at2g31040 : 374.0) ATP synthase protein I -related; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 182 Blast hits to 182 proteins in 74 species: Archae - 0; Bacteria - 104; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 2; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 748.0) & (original description: Putative At2g31040, Description = ATP synthase protein I-related protein, PFAM = )' T '1.1.4.1' 'PS.lightreaction.ATP synthase.alpha subunit' 'nbv0.5scaffold4891_94153-96690' '(gnl|cdd|79276 : 897.0) no description available & (q3c1h4|atpa_nicsy : 817.0) ATP synthase subunit alpha (EC 3.6.3.14) (ATPase subunit alpha) (ATP synthase F1 sector subunit alpha) - Nicotiana sylvestris (Wood tobacco) & (atcg00120 : 778.0) Encodes the ATPase alpha subunit, which is a subunit of ATP synthase and part of the CF1 portion which catalyzes the conversion of ADP to ATP using the proton motive force. This complex is located in the thylakoid membrane of the chloroplast.; ATP synthase subunit alpha (ATPA); FUNCTIONS IN: zinc ion binding, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: response to cold, defense response to bacterium, dATP biosynthetic process from ADP; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, alpha subunit, C-terminal (InterPro:IPR017458), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1 complex, alpha subunit (InterPro:IPR005294), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, alpha subunit protein (TAIR:AT2G07698.1). & (gnl|cdd|36567 : 256.0) no description available & (reliability: 1556.0) & (original description: Putative atpA, Description = ATP synthase subunit alpha, chloroplastic, PFAM = PF02874;PF00306;PF00006)' T '1.1.4.1' 'PS.lightreaction.ATP synthase.alpha subunit' 'niben044scf00014241ctg010_1-1337' '(gnl|cdd|79276 : 194.0) no description available & (q3c1h4|atpa_nicsy : 159.0) ATP synthase subunit alpha (EC 3.6.3.14) (ATPase subunit alpha) (ATP synthase F1 sector subunit alpha) - Nicotiana sylvestris (Wood tobacco) & (atcg00120 : 152.0) Encodes the ATPase alpha subunit, which is a subunit of ATP synthase and part of the CF1 portion which catalyzes the conversion of ADP to ATP using the proton motive force. This complex is located in the thylakoid membrane of the chloroplast.; ATP synthase subunit alpha (ATPA); FUNCTIONS IN: zinc ion binding, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: response to cold, defense response to bacterium, dATP biosynthetic process from ADP; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, alpha subunit, C-terminal (InterPro:IPR017458), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1 complex, alpha subunit (InterPro:IPR005294), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, alpha subunit protein (TAIR:AT2G07698.1). & (gnl|cdd|36567 : 125.0) no description available & (reliability: 304.0) & (original description: Putative atpA, Description = ATP synthase F1 sector subunit alpha, PFAM = PF02874)' T '1.1.4.1' 'PS.lightreaction.ATP synthase.alpha subunit' 'niben101scf00167_405078-408598' '(gnl|cdd|79276 : 950.0) no description available & (q3c1h4|atpa_nicsy : 879.0) ATP synthase subunit alpha (EC 3.6.3.14) (ATPase subunit alpha) (ATP synthase F1 sector subunit alpha) - Nicotiana sylvestris (Wood tobacco) & (atcg00120 : 837.0) Encodes the ATPase alpha subunit, which is a subunit of ATP synthase and part of the CF1 portion which catalyzes the conversion of ADP to ATP using the proton motive force. This complex is located in the thylakoid membrane of the chloroplast.; ATP synthase subunit alpha (ATPA); FUNCTIONS IN: zinc ion binding, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: response to cold, defense response to bacterium, dATP biosynthetic process from ADP; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, alpha subunit, C-terminal (InterPro:IPR017458), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1 complex, alpha subunit (InterPro:IPR005294), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, alpha subunit protein (TAIR:AT2G07698.1). & (gnl|cdd|36567 : 287.0) no description available & (reliability: 1674.0) & (original description: Putative atpA, Description = ATP synthase subunit alpha, chloroplastic, PFAM = PF00306;PF00006;PF02874)' T '1.1.4.2' 'PS.lightreaction.ATP synthase.beta subunit' 'nbv0.5scaffold260_303433-792580' '(gnl|cdd|79277 : 815.0) no description available & (p69370|atpb_nicpl : 741.0) ATP synthase subunit beta (EC 3.6.3.14) (ATPase subunit beta) (ATP synthase F1 sector subunit beta) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (atcg00480 : 719.0) chloroplast-encoded gene for beta subunit of ATP synthase; ATP synthase subunit beta (PB); FUNCTIONS IN: hydrogen ion transmembrane transporter activity, zinc ion binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cold, ATP synthesis coupled proton transport; LOCATED IN: in 11 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1). & (gnl|cdd|36564 : 705.0) no description available & (reliability: 1438.0) & (original description: Putative atpB, Description = ATP synthase subunit beta, PFAM = PF00006;PF02874)' T '1.1.4.2' 'PS.lightreaction.ATP synthase.beta subunit' 'nbv0.5scaffold654_453027-455335' '(p69370|atpb_nicpl : 184.0) ATP synthase subunit beta (EC 3.6.3.14) (ATPase subunit beta) (ATP synthase F1 sector subunit beta) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|79277 : 153.0) no description available & (atcg00480 : 151.0) chloroplast-encoded gene for beta subunit of ATP synthase; ATP synthase subunit beta (PB); FUNCTIONS IN: hydrogen ion transmembrane transporter activity, zinc ion binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cold, ATP synthesis coupled proton transport; LOCATED IN: in 11 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1). & (gnl|cdd|36564 : 97.8) no description available & (reliability: 302.0) & (original description: Putative atpB, Description = ATP synthase CF1 beta subunit, PFAM = PF02874)' T '1.1.4.2' 'PS.lightreaction.ATP synthase.beta subunit' 'nbv0.5scaffold654_453273-455779' '(gnl|cdd|79277 : 210.0) no description available & (gnl|cdd|36564 : 181.0) no description available & (p06541|atpb_chlre : 176.0) ATP synthase subunit beta (EC 3.6.3.14) (ATPase subunit beta) (ATP synthase F1 sector subunit beta) - Chlamydomonas reinhardtii & (atcg00480 : 162.0) chloroplast-encoded gene for beta subunit of ATP synthase; ATP synthase subunit beta (PB); FUNCTIONS IN: hydrogen ion transmembrane transporter activity, zinc ion binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cold, ATP synthesis coupled proton transport; LOCATED IN: in 11 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1). & (reliability: 324.0) & (original description: Putative atbB, Description = ATP synthase F1 sector subunit beta, PFAM = PF00006)' T '1.1.4.2' 'PS.lightreaction.ATP synthase.beta subunit' 'niben101scf00854_1082163-1085431' '(gnl|cdd|82909 : 135.0) no description available & (gnl|cdd|36564 : 117.0) no description available & (q8s8w8|atpb_atrbe : 114.0) ATP synthase subunit beta (EC 3.6.3.14) (ATPase subunit beta) (ATP synthase F1 sector subunit beta) - Atropa belladonna (Belladonna) (Deadly nightshade) & (atcg00480 : 111.0) chloroplast-encoded gene for beta subunit of ATP synthase; ATP synthase subunit beta (PB); FUNCTIONS IN: hydrogen ion transmembrane transporter activity, zinc ion binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cold, ATP synthesis coupled proton transport; LOCATED IN: in 11 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1). & (reliability: 222.0) & (original description: Putative atpB, Description = ATP synthase F1 sector subunit beta, PFAM = PF00006)' T '1.1.4.2' 'PS.lightreaction.ATP synthase.beta subunit' 'niben101scf07103_165009-167573' '(gnl|cdd|79277 : 195.0) no description available & (gnl|cdd|36564 : 169.0) no description available & (p06541|atpb_chlre : 162.0) ATP synthase subunit beta (EC 3.6.3.14) (ATPase subunit beta) (ATP synthase F1 sector subunit beta) - Chlamydomonas reinhardtii & (atcg00480 : 149.0) chloroplast-encoded gene for beta subunit of ATP synthase; ATP synthase subunit beta (PB); FUNCTIONS IN: hydrogen ion transmembrane transporter activity, zinc ion binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cold, ATP synthesis coupled proton transport; LOCATED IN: in 11 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1). & (reliability: 298.0) & (original description: Putative atbB, Description = ATP synthase subunit beta, PFAM = PF00006)' T '1.1.4.2' 'PS.lightreaction.ATP synthase.beta subunit' 'niben101scf25536_1-803' '(q3c1j5|atpb_nicsy : 186.0) ATP synthase subunit beta (EC 3.6.3.14) (ATPase subunit beta) (ATP synthase F1 sector subunit beta) - Nicotiana sylvestris (Wood tobacco) & (atcg00480 : 152.0) chloroplast-encoded gene for beta subunit of ATP synthase; ATP synthase subunit beta (PB); FUNCTIONS IN: hydrogen ion transmembrane transporter activity, zinc ion binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cold, ATP synthesis coupled proton transport; LOCATED IN: in 11 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1). & (gnl|cdd|79277 : 149.0) no description available & (gnl|cdd|36564 : 98.2) no description available & (reliability: 304.0) & (original description: Putative atpB, Description = ATP synthase beta subunit, PFAM = PF02874)' T '1.1.4.3' 'PS.lightreaction.ATP synthase.epsilon chain' 'nbv0.3scaffold115032_122-2528' '(p00834|atpe_tobac : 240.0) ATP synthase epsilon chain (EC 3.6.3.14) (ATP synthase F1 sector epsilon subunit) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79280 : 227.0) no description available & (atcg00470 : 214.0) ATPase epsilon subunit; ATP synthase epsilon chain (ATPE); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: cellular respiration, mitochondrial ATP synthesis coupled proton transport; LOCATED IN: proton-transporting ATP synthase complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, delta/epsilon subunit, N-terminal (InterPro:IPR020546), ATPase, F1 complex, delta/epsilon subunit, C-terminal (InterPro:IPR020547), ATPase, F1 complex, delta/epsilon subunit (InterPro:IPR001469). & (gnl|cdd|36969 : 140.0) no description available & (reliability: 428.0) & (original description: Putative atpE, Description = ATP synthase epsilon chain, chloroplastic, PFAM = PF02823;PF00401)' T '1.1.4.3' 'PS.lightreaction.ATP synthase.epsilon chain' 'niben044scf00018070ctg011_513-2821' '(p00834|atpe_tobac : 179.0) ATP synthase epsilon chain (EC 3.6.3.14) (ATP synthase F1 sector epsilon subunit) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79280 : 162.0) no description available & (atcg00470 : 157.0) ATPase epsilon subunit; ATP synthase epsilon chain (ATPE); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: cellular respiration, mitochondrial ATP synthesis coupled proton transport; LOCATED IN: proton-transporting ATP synthase complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, delta/epsilon subunit, N-terminal (InterPro:IPR020546), ATPase, F1 complex, delta/epsilon subunit, C-terminal (InterPro:IPR020547), ATPase, F1 complex, delta/epsilon subunit (InterPro:IPR001469). & (gnl|cdd|36969 : 102.0) no description available & (reliability: 314.0) & (original description: Putative atpE, Description = ATP synthase epsilon chain, chloroplastic, PFAM = PF02823;PF00401)' T '1.1.4.3' 'PS.lightreaction.ATP synthase.epsilon chain' 'niben101scf03068_5709-8553' '(p00834|atpe_tobac : 243.0) ATP synthase epsilon chain (EC 3.6.3.14) (ATP synthase F1 sector epsilon subunit) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79280 : 229.0) no description available & (atcg00470 : 218.0) ATPase epsilon subunit; ATP synthase epsilon chain (ATPE); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: cellular respiration, mitochondrial ATP synthesis coupled proton transport; LOCATED IN: proton-transporting ATP synthase complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, delta/epsilon subunit, N-terminal (InterPro:IPR020546), ATPase, F1 complex, delta/epsilon subunit, C-terminal (InterPro:IPR020547), ATPase, F1 complex, delta/epsilon subunit (InterPro:IPR001469). & (gnl|cdd|36564 : 157.0) no description available & (reliability: 436.0) & (original description: Putative atpE, Description = ATP synthase epsilon chain, chloroplastic, PFAM = PF02823;PF00401)' T '1.1.4.3' 'PS.lightreaction.ATP synthase.epsilon chain' 'niben101scf07103_163860-167104' '(p00834|atpe_tobac : 181.0) ATP synthase epsilon chain (EC 3.6.3.14) (ATP synthase F1 sector epsilon subunit) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79280 : 163.0) no description available & (atcg00470 : 159.0) ATPase epsilon subunit; ATP synthase epsilon chain (ATPE); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: cellular respiration, mitochondrial ATP synthesis coupled proton transport; LOCATED IN: proton-transporting ATP synthase complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, delta/epsilon subunit, N-terminal (InterPro:IPR020546), ATPase, F1 complex, delta/epsilon subunit, C-terminal (InterPro:IPR020547), ATPase, F1 complex, delta/epsilon subunit (InterPro:IPR001469). & (gnl|cdd|36969 : 97.4) no description available & (reliability: 318.0) & (original description: Putative atpB, Description = ATP synthase epsilon chain, chloroplastic, PFAM = PF00006;PF02823)' T '1.1.4.4' 'PS.lightreaction.ATP synthase.gamma chain' 'nbv0.5scaffold71_335843-338973' '(p29790|atpg_tobac : 546.0) ATP synthase gamma chain, chloroplast precursor (EC 3.6.3.14) - Nicotiana tabacum (Common tobacco) & (at4g04640 : 482.0) One of two genes (with ATPC2) encoding the gamma subunit of Arabidopsis chloroplast ATP synthase.; ATPC1; FUNCTIONS IN: enzyme regulator activity; INVOLVED IN: photosynthetic electron transport in photosystem II, ATP synthesis coupled proton transport, ATP biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, gamma subunit (InterPro:IPR000131); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, gamma subunit protein (TAIR:AT1G15700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84628 : 350.0) no description available & (gnl|cdd|36744 : 311.0) no description available & (reliability: 964.0) & (original description: Putative ATPC, Description = ATP synthase gamma chain, chloroplastic, PFAM = PF00231)' T '1.1.4.4' 'PS.lightreaction.ATP synthase.gamma chain' 'niben101scf04477_160715-164185' '(p29790|atpg_tobac : 459.0) ATP synthase gamma chain, chloroplast precursor (EC 3.6.3.14) - Nicotiana tabacum (Common tobacco) & (at4g04640 : 438.0) One of two genes (with ATPC2) encoding the gamma subunit of Arabidopsis chloroplast ATP synthase.; ATPC1; FUNCTIONS IN: enzyme regulator activity; INVOLVED IN: photosynthetic electron transport in photosystem II, ATP synthesis coupled proton transport, ATP biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, gamma subunit (InterPro:IPR000131); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, gamma subunit protein (TAIR:AT1G15700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84628 : 322.0) no description available & (gnl|cdd|36744 : 272.0) no description available & (reliability: 876.0) & (original description: Putative ATPC, Description = ATP synthase gamma chain, chloroplastic, PFAM = PF00231)' T '1.1.4.4' 'PS.lightreaction.ATP synthase.gamma chain' 'niben101scf04477_161390-163886' '(p29790|atpg_tobac : 196.0) ATP synthase gamma chain, chloroplast precursor (EC 3.6.3.14) - Nicotiana tabacum (Common tobacco) & (at1g15700 : 190.0) One of two genes that encode the gamma subunit of Arabidopsis chloroplast ATP synthase. It is thought to be involved in the regulation of the ATP synthase activity.; ATPC2; FUNCTIONS IN: enzyme regulator activity; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: chloroplast ATP synthase complex, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, gamma subunit (InterPro:IPR000131); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, gamma subunit protein (TAIR:AT4G04640.1); Has 9547 Blast hits to 9544 proteins in 2715 species: Archae - 5; Bacteria - 5540; Metazoa - 280; Fungi - 148; Plants - 177; Viruses - 0; Other Eukaryotes - 3397 (source: NCBI BLink). & (gnl|cdd|84628 : 141.0) no description available & (gnl|cdd|36744 : 123.0) no description available & (reliability: 380.0) & (original description: Putative atpC, Description = F-ATPase gamma subunit, PFAM = PF00231)' T '1.1.4.4' 'PS.lightreaction.ATP synthase.gamma chain' 'niben101scf14955_21853-24983' '(p29790|atpg_tobac : 577.0) ATP synthase gamma chain, chloroplast precursor (EC 3.6.3.14) - Nicotiana tabacum (Common tobacco) & (at4g04640 : 509.0) One of two genes (with ATPC2) encoding the gamma subunit of Arabidopsis chloroplast ATP synthase.; ATPC1; FUNCTIONS IN: enzyme regulator activity; INVOLVED IN: photosynthetic electron transport in photosystem II, ATP synthesis coupled proton transport, ATP biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, gamma subunit (InterPro:IPR000131); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, gamma subunit protein (TAIR:AT1G15700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84628 : 348.0) no description available & (gnl|cdd|36744 : 307.0) no description available & (reliability: 1018.0) & (original description: Putative ATPC, Description = ATP synthase gamma chain, chloroplastic, PFAM = PF00231)' T '1.1.4.5' 'PS.lightreaction.ATP synthase.subunit C' 'niben044scf00011635ctg015_5725-7485' '(gnl|cdd|79278 : 108.0) no description available & (p06286|atph_tobac : 106.0) ATP synthase C chain (EC 3.6.3.14) (Lipid-binding protein) (ATPase subunit III) - Nicotiana tabacum (Common tobacco) & (atcg00140 : 105.0) ATPase III subunit; ATPH; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit C, DCCD-binding site (InterPro:IPR020537), ATPase, F0/V0 complex, subunit C (InterPro:IPR002379), ATPase, F0 complex, subunit C (InterPro:IPR000454), ATPase, F0 complex, subunit C, bacterial/chloroplast (InterPro:IPR005953). & (reliability: 210.0) & (original description: Putative atpH, Description = ATP synthase subunit c, chloroplastic, PFAM = PF00137)' T '1.1.4.5' 'PS.lightreaction.ATP synthase.subunit C' 'niben101scf08516_298658-300900' '(gnl|cdd|79278 : 110.0) no description available & (p06286|atph_tobac : 83.6) ATP synthase C chain (EC 3.6.3.14) (Lipid-binding protein) (ATPase subunit III) - Nicotiana tabacum (Common tobacco) & (atcg00140 : 83.2) ATPase III subunit; ATPH; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit C, DCCD-binding site (InterPro:IPR020537), ATPase, F0/V0 complex, subunit C (InterPro:IPR002379), ATPase, F0 complex, subunit C (InterPro:IPR000454), ATPase, F0 complex, subunit C, bacterial/chloroplast (InterPro:IPR005953). & (reliability: 166.4) & (original description: Putative atpH, Description = ATP synthase subunit c, chloroplastic, PFAM = PF00137)' T '1.1.4.6' 'PS.lightreaction.ATP synthase.chloroplastic subunit a' 'nbv0.3scaffold43882_11133-13873' '(gnl|cdd|79264 : 423.0) no description available & (p69372|atpi_tobac : 415.0) Chloroplast ATP synthase a chain precursor (EC 3.6.3.14) (ATPase subunit IV) - Nicotiana tabacum (Common tobacco) & (atcg00150 : 391.0) Encodes a subunit of ATPase complex CF0, which is a proton channel that supplies the proton motive force to drive ATP synthesis by CF1 portion of the complex.; ATPI; FUNCTIONS IN: hydrogen ion channel activity; INVOLVED IN: dATP biosynthetic process from ADP; LOCATED IN: chloroplast thylakoid membrane, chloroplast ATP synthase complex, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit A (InterPro:IPR000568). & (gnl|cdd|39864 : 179.0) no description available & (reliability: 782.0) & (original description: Putative atpI, Description = ATP synthase CF0 subunit IV, PFAM = PF00119)' T '1.1.4.6' 'PS.lightreaction.ATP synthase.chloroplastic subunit a' 'niben101scf00167_401217-403957' '(gnl|cdd|79264 : 440.0) no description available & (p69372|atpi_tobac : 423.0) Chloroplast ATP synthase a chain precursor (EC 3.6.3.14) (ATPase subunit IV) - Nicotiana tabacum (Common tobacco) & (atcg00150 : 399.0) Encodes a subunit of ATPase complex CF0, which is a proton channel that supplies the proton motive force to drive ATP synthesis by CF1 portion of the complex.; ATPI; FUNCTIONS IN: hydrogen ion channel activity; INVOLVED IN: dATP biosynthetic process from ADP; LOCATED IN: chloroplast thylakoid membrane, chloroplast ATP synthase complex, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit A (InterPro:IPR000568). & (gnl|cdd|39864 : 190.0) no description available & (reliability: 798.0) & (original description: Putative atpI, Description = ATP synthase subunit a, chloroplastic, PFAM = PF00119)' T '1.1.4.7' 'PS.lightreaction.ATP synthase.delta chain' 'nbv0.3scaffold90212_17-2765' '(p32980|atpd_tobac : 377.0) ATP synthase delta chain, chloroplast precursor (EC 3.6.3.14) - Nicotiana tabacum (Common tobacco) & (at4g09650 : 221.0) Encodes the chloroplast ATPase delta-subunit.; ATP synthase delta-subunit gene (ATPD); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: response to cold, defense response to bacterium, photosynthetic electron transport in photosystem I, photosynthetic electron transport in photosystem II, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, OSCP/delta subunit, conserved site (InterPro:IPR020781), ATPase, F1 complex, OSCP/delta subunit (InterPro:IPR000711); Has 4372 Blast hits to 4372 proteins in 1436 species: Archae - 0; Bacteria - 2635; Metazoa - 155; Fungi - 114; Plants - 153; Viruses - 0; Other Eukaryotes - 1315 (source: NCBI BLink). & (gnl|cdd|84616 : 150.0) no description available & (gnl|cdd|36875 : 138.0) no description available & (reliability: 442.0) & (original description: Putative ATPD, Description = ATP synthase delta chain, chloroplastic, PFAM = PF00213)' T '1.1.4.7' 'PS.lightreaction.ATP synthase.delta chain' 'niben101scf00960_294937-297851' '(p32980|atpd_tobac : 362.0) ATP synthase delta chain, chloroplast precursor (EC 3.6.3.14) - Nicotiana tabacum (Common tobacco) & (at4g09650 : 216.0) Encodes the chloroplast ATPase delta-subunit.; ATP synthase delta-subunit gene (ATPD); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: response to cold, defense response to bacterium, photosynthetic electron transport in photosystem I, photosynthetic electron transport in photosystem II, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, OSCP/delta subunit, conserved site (InterPro:IPR020781), ATPase, F1 complex, OSCP/delta subunit (InterPro:IPR000711); Has 4372 Blast hits to 4372 proteins in 1436 species: Archae - 0; Bacteria - 2635; Metazoa - 155; Fungi - 114; Plants - 153; Viruses - 0; Other Eukaryotes - 1315 (source: NCBI BLink). & (gnl|cdd|84616 : 152.0) no description available & (gnl|cdd|36875 : 138.0) no description available & (reliability: 432.0) & (original description: Putative ATPD, Description = ATP synthase delta chain, chloroplastic, PFAM = PF00213)' T '1.1.4.7' 'PS.lightreaction.ATP synthase.delta chain' 'niben101scf15372_2783-5528' '(p32980|atpd_tobac : 361.0) ATP synthase delta chain, chloroplast precursor (EC 3.6.3.14) - Nicotiana tabacum (Common tobacco) & (at4g09650 : 218.0) Encodes the chloroplast ATPase delta-subunit.; ATP synthase delta-subunit gene (ATPD); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: response to cold, defense response to bacterium, photosynthetic electron transport in photosystem I, photosynthetic electron transport in photosystem II, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, OSCP/delta subunit, conserved site (InterPro:IPR020781), ATPase, F1 complex, OSCP/delta subunit (InterPro:IPR000711); Has 4372 Blast hits to 4372 proteins in 1436 species: Archae - 0; Bacteria - 2635; Metazoa - 155; Fungi - 114; Plants - 153; Viruses - 0; Other Eukaryotes - 1315 (source: NCBI BLink). & (gnl|cdd|84616 : 152.0) no description available & (gnl|cdd|36875 : 140.0) no description available & (reliability: 436.0) & (original description: Putative ATPD, Description = ATP synthase delta chain, chloroplastic, PFAM = PF00213)' T '1.1.4.8' 'PS.lightreaction.ATP synthase.subunit B (ATPF)' 'nbv0.3scaffold98949_757-4029' '(p06290|atpf_tobac : 310.0) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79238 : 297.0) no description available & (atcg00130 : 286.0) ATPase F subunit.; ATPF; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: cellular respiration, mitochondrial ATP synthesis coupled proton transport; LOCATED IN: proton-transporting ATP synthase complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit B/B', bacterial/chloroplast (InterPro:IPR002146). & (reliability: 572.0) & (original description: Putative atpF, Description = ATP synthase subunit b, chloroplastic, PFAM = PF00430)' T '1.1.4.9' 'PS.lightreaction.ATP synthase.subunit B_ (ATPX)' 'niben044scf00004717ctg006_33193-35838' '(p31853|atpx_spiol : 125.0) ATP synthase B' chain, chloroplast precursor (EC 3.6.3.14) (Subunit II) - Spinacia oleracea (Spinach) & (at4g32260 : 115.0) ATPase, F0 complex, subunit B/B', bacterial/chloroplast; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit B/B', bacterial/chloroplast (InterPro:IPR002146); Has 2587 Blast hits to 2581 proteins in 935 species: Archae - 6; Bacteria - 1820; Metazoa - 10; Fungi - 8; Plants - 73; Viruses - 1; Other Eukaryotes - 669 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative atpG, Description = Putative uncharacterized protein atpG, PFAM = PF00430)' T '1.1.4.9' 'PS.lightreaction.ATP synthase.subunit B_ (ATPX)' 'niben101scf04786_76975-79634' '(p31853|atpx_spiol : 198.0) ATP synthase B' chain, chloroplast precursor (EC 3.6.3.14) (Subunit II) - Spinacia oleracea (Spinach) & (at4g32260 : 160.0) ATPase, F0 complex, subunit B/B', bacterial/chloroplast; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit B/B', bacterial/chloroplast (InterPro:IPR002146); Has 2587 Blast hits to 2581 proteins in 935 species: Archae - 6; Bacteria - 1820; Metazoa - 10; Fungi - 8; Plants - 73; Viruses - 1; Other Eukaryotes - 669 (source: NCBI BLink). & (gnl|cdd|82206 : 88.8) no description available & (reliability: 320.0) & (original description: Putative ATPG, Description = ATP synthase subunit b', chloroplastic, PFAM = PF00430)' T '1.1.4.9' 'PS.lightreaction.ATP synthase.subunit B_ (ATPX)' 'niben101scf07638_122116-124761' '(p31853|atpx_spiol : 155.0) ATP synthase B' chain, chloroplast precursor (EC 3.6.3.14) (Subunit II) - Spinacia oleracea (Spinach) & (at4g32260 : 142.0) ATPase, F0 complex, subunit B/B', bacterial/chloroplast; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit B/B', bacterial/chloroplast (InterPro:IPR002146); Has 2587 Blast hits to 2581 proteins in 935 species: Archae - 6; Bacteria - 1820; Metazoa - 10; Fungi - 8; Plants - 73; Viruses - 1; Other Eukaryotes - 669 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative atpG, Description = Putative uncharacterized protein atpG, PFAM = PF00430)' T '1.1.5' 'PS.lightreaction.other electron carrier (ox/red)' 'nbv0.5scaffold2641_184665-195106' '(at5g45040 : 153.0) Cytochrome c; FUNCTIONS IN: electron carrier activity, iron ion binding, heme binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c, class I (InterPro:IPR003088), Cytochrome c domain (InterPro:IPR009056); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative CYC4, Description = Cytochrome c6, chloroplastic, PFAM = )' T '1.1.5' 'PS.lightreaction.other electron carrier (ox/red)' 'niben101scf02174_272304-288679' '(at5g45040 : 220.0) Cytochrome c; FUNCTIONS IN: electron carrier activity, iron ion binding, heme binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c, class I (InterPro:IPR003088), Cytochrome c domain (InterPro:IPR009056); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative BnaA02g23660D, Description = BnaA02g23660D protein, PFAM = PF13442)' T '1.1.5' 'PS.lightreaction.other electron carrier (ox/red)' 'niben101scf03867_212116-222567' '(at5g45040 : 221.0) Cytochrome c; FUNCTIONS IN: electron carrier activity, iron ion binding, heme binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c, class I (InterPro:IPR003088), Cytochrome c domain (InterPro:IPR009056); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative BnaC02g31310D, Description = BnaC02g31310D protein, PFAM = PF13442)' T '1.1.5.1' 'PS.lightreaction.other electron carrier (ox/red).plastocyanin' 'niben101scf00057_12854-15354' '(p16002|plas_pea : 193.0) Plastocyanin, chloroplast precursor - Pisum sativum (Garden pea) & (at1g20340 : 182.0) recombination and DNA-damage resistance protein (DRT112) One of two Arabidopsis plastocyanin genes. Predominant form, expressed 10x higher than PETE1. PETE2 is thought to be post-transcriptionally regulated via copper accumulation and is involved in copper homeostasis.; DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 112 (DRT112); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to UV, response to chemical stimulus, copper ion homeostasis, negative regulation of translation, response to copper ion; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Blue (type 1) copper protein (InterPro:IPR001235), Cupredoxin (InterPro:IPR008972), Plastocyanin (InterPro:IPR002387), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: plastocyanin 1 (TAIR:AT1G76100.1); Has 1286 Blast hits to 1278 proteins in 235 species: Archae - 146; Bacteria - 416; Metazoa - 0; Fungi - 2; Plants - 206; Viruses - 5; Other Eukaryotes - 511 (source: NCBI BLink). & (gnl|cdd|84543 : 141.0) no description available & (reliability: 364.0) & (original description: Putative PETE, Description = Plastocyanin, chloroplastic, PFAM = PF00127)' T '1.1.5.1' 'PS.lightreaction.other electron carrier (ox/red).plastocyanin' 'niben101scf00508_15919-18419' '(p16002|plas_pea : 191.0) Plastocyanin, chloroplast precursor - Pisum sativum (Garden pea) & (at1g20340 : 182.0) recombination and DNA-damage resistance protein (DRT112) One of two Arabidopsis plastocyanin genes. Predominant form, expressed 10x higher than PETE1. PETE2 is thought to be post-transcriptionally regulated via copper accumulation and is involved in copper homeostasis.; DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 112 (DRT112); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to UV, response to chemical stimulus, copper ion homeostasis, negative regulation of translation, response to copper ion; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Blue (type 1) copper protein (InterPro:IPR001235), Cupredoxin (InterPro:IPR008972), Plastocyanin (InterPro:IPR002387), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: plastocyanin 1 (TAIR:AT1G76100.1); Has 1286 Blast hits to 1278 proteins in 235 species: Archae - 146; Bacteria - 416; Metazoa - 0; Fungi - 2; Plants - 206; Viruses - 5; Other Eukaryotes - 511 (source: NCBI BLink). & (gnl|cdd|84543 : 140.0) no description available & (reliability: 364.0) & (original description: Putative PETE, Description = Plastocyanin, PFAM = PF00127)' T '1.1.5.1' 'PS.lightreaction.other electron carrier (ox/red).plastocyanin' 'niben101scf00539_838168-840674' '(p16002|plas_pea : 184.0) Plastocyanin, chloroplast precursor - Pisum sativum (Garden pea) & (at1g20340 : 181.0) recombination and DNA-damage resistance protein (DRT112) One of two Arabidopsis plastocyanin genes. Predominant form, expressed 10x higher than PETE1. PETE2 is thought to be post-transcriptionally regulated via copper accumulation and is involved in copper homeostasis.; DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 112 (DRT112); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to UV, response to chemical stimulus, copper ion homeostasis, negative regulation of translation, response to copper ion; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Blue (type 1) copper protein (InterPro:IPR001235), Cupredoxin (InterPro:IPR008972), Plastocyanin (InterPro:IPR002387), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: plastocyanin 1 (TAIR:AT1G76100.1); Has 1286 Blast hits to 1278 proteins in 235 species: Archae - 146; Bacteria - 416; Metazoa - 0; Fungi - 2; Plants - 206; Viruses - 5; Other Eukaryotes - 511 (source: NCBI BLink). & (gnl|cdd|84543 : 135.0) no description available & (reliability: 362.0) & (original description: Putative PETE, Description = Plastocyanin, chloroplastic, PFAM = PF00127)' T '1.1.5.1' 'PS.lightreaction.other electron carrier (ox/red).plastocyanin' 'niben101scf03865_58408-60278' '(p35476|plas1_tobac : 183.0) Plastocyanin A'/A'' - Nicotiana tabacum (Common tobacco) & (at1g20340 : 167.0) recombination and DNA-damage resistance protein (DRT112) One of two Arabidopsis plastocyanin genes. Predominant form, expressed 10x higher than PETE1. PETE2 is thought to be post-transcriptionally regulated via copper accumulation and is involved in copper homeostasis.; DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 112 (DRT112); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to UV, response to chemical stimulus, copper ion homeostasis, negative regulation of translation, response to copper ion; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Blue (type 1) copper protein (InterPro:IPR001235), Cupredoxin (InterPro:IPR008972), Plastocyanin (InterPro:IPR002387), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: plastocyanin 1 (TAIR:AT1G76100.1); Has 1286 Blast hits to 1278 proteins in 235 species: Archae - 146; Bacteria - 416; Metazoa - 0; Fungi - 2; Plants - 206; Viruses - 5; Other Eukaryotes - 511 (source: NCBI BLink). & (gnl|cdd|84543 : 135.0) no description available & (reliability: 334.0) & (original description: Putative PETE, Description = Plastocyanin, chloroplastic, PFAM = PF00127)' T '1.1.5.2' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin' 'nbv0.3scaffold61472_2724-7650' '(at5g07950 : 152.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative BnaA10g23360D, Description = BnaA10g23360D protein, PFAM = )' T '1.1.5.2' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin' 'nbv0.5scaffold3941_62738-193202' '(at3g16250 : 182.0) encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP. Contains a 4Fe-4S cluster.; NDH-dependent cyclic electron flow 1 (NDF4); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast thylakoid membrane, chloroplast, NAD(P)H dehydrogenase complex (plastoquinone); EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: 2Fe-2S ferredoxin-like superfamily protein (TAIR:AT4G32590.1); Has 476 Blast hits to 476 proteins in 113 species: Archae - 4; Bacteria - 232; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative NDF4, Description = Photosynthetic NDH subcomplex B 3, PFAM = PF00111)' T '1.1.5.2' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin' 'niben044scf00001068ctg006_50212-52255' '(at5g07950 : 97.1) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative BnaA10g23360D, Description = BnaA10g23360D protein, PFAM = )' T '1.1.5.2' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin' 'niben044scf00012835ctg000_660-3805' '(at3g16250 : 144.0) encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP. Contains a 4Fe-4S cluster.; NDH-dependent cyclic electron flow 1 (NDF4); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast thylakoid membrane, chloroplast, NAD(P)H dehydrogenase complex (plastoquinone); EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: 2Fe-2S ferredoxin-like superfamily protein (TAIR:AT4G32590.1); Has 476 Blast hits to 476 proteins in 113 species: Archae - 4; Bacteria - 232; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative BnaA05g23450D, Description = BnaA05g23450D protein, PFAM = PF00111)' T '1.1.5.2' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin' 'niben044scf00024164ctg001_1-6283' '(at5g07950 : 154.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative BnaA10g23360D, Description = BnaA10g23360D protein, PFAM = )' T '1.1.5.2' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin' 'niben101scf00495_12607-21807' '(at5g07950 : 255.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 510.0) & (original description: Putative BnaA10g23360D, Description = BnaA10g23360D protein, PFAM = )' T '1.1.5.2' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin' 'niben101scf01993_920472-922903' '(q9zts2|fer_capan : 216.0) Ferredoxin, chloroplast precursor (PFLP) - Capsicum annuum (Bell pepper) & (at1g60950 : 157.0) encodes a major leaf ferredoxin; FED A; FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: photosynthetic electron transport chain, response to light stimulus; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), Ferredoxin (InterPro:IPR001041), Ferredoxin [2Fe-2S], plant (InterPro:IPR010241), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: ferredoxin 1 (TAIR:AT1G10960.1); Has 7652 Blast hits to 7650 proteins in 1365 species: Archae - 135; Bacteria - 5670; Metazoa - 7; Fungi - 12; Plants - 625; Viruses - 5; Other Eukaryotes - 1198 (source: NCBI BLink). & (gnl|cdd|79346 : 140.0) no description available & (reliability: 314.0) & (original description: Putative SEND33, Description = Ferredoxin-1, chloroplastic, PFAM = PF00111)' T '1.1.5.2' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin' 'niben101scf03864_101696-105280' '(at3g16250 : 184.0) encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP. Contains a 4Fe-4S cluster.; NDH-dependent cyclic electron flow 1 (NDF4); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast thylakoid membrane, chloroplast, NAD(P)H dehydrogenase complex (plastoquinone); EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: 2Fe-2S ferredoxin-like superfamily protein (TAIR:AT4G32590.1); Has 476 Blast hits to 476 proteins in 113 species: Archae - 4; Bacteria - 232; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative PNSB3, Description = Photosynthetic NDH subunit of subcomplex B 3, chloroplastic, PFAM = PF00111)' T '1.1.5.2' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin' 'niben101scf10476_142307-147261' '(at1g02180 : 228.0) ferredoxin-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 54 Blast hits to 54 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative PGSC0003DMG400001687, Description = Ferredoxin-like protein, PFAM = )' T '1.1.5.2' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin' 'niben101scf10627_57340-61895' '(at1g02180 : 134.0) ferredoxin-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 54 Blast hits to 54 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative MTR_3g105080, Description = Ferredoxin-like protein, PFAM = )' T '1.1.5.2' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin' 'niben101scf22688_164499-166930' '(q9zts2|fer_capan : 218.0) Ferredoxin, chloroplast precursor (PFLP) - Capsicum annuum (Bell pepper) & (at1g60950 : 159.0) encodes a major leaf ferredoxin; FED A; FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: photosynthetic electron transport chain, response to light stimulus; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), Ferredoxin (InterPro:IPR001041), Ferredoxin [2Fe-2S], plant (InterPro:IPR010241), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: ferredoxin 1 (TAIR:AT1G10960.1); Has 7652 Blast hits to 7650 proteins in 1365 species: Archae - 135; Bacteria - 5670; Metazoa - 7; Fungi - 12; Plants - 625; Viruses - 5; Other Eukaryotes - 1198 (source: NCBI BLink). & (gnl|cdd|79346 : 140.0) no description available & (reliability: 318.0) & (original description: Putative SEND33, Description = Ferredoxin-1, chloroplastic, PFAM = PF00111)' T '1.1.5.3' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin reductase' 'niben101scf02583_686557-691071' '(o04977|fenr1_tobac : 576.0) Ferredoxin--NADP reductase, leaf-type isozyme, chloroplast precursor (EC 1.18.1.2) (FNR) - Nicotiana tabacum (Common tobacco) & (at1g20020 : 530.0) Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the stroma; LEAF FNR 2 (ATLFNR2); FUNCTIONS IN: oxidoreductase activity, poly(U) RNA binding, NADPH dehydrogenase activity; INVOLVED IN: oxidation reduction, defense response to fungus, incompatible interaction, defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Ferredoxin--NADP reductase (InterPro:IPR012146), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferredoxin Reductase (InterPro:IPR015701), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709); BEST Arabidopsis thaliana protein match is: ferredoxin-NADP(+)-oxidoreductase 1 (TAIR:AT5G66190.1); Has 6779 Blast hits to 6779 proteins in 1702 species: Archae - 20; Bacteria - 3601; Metazoa - 804; Fungi - 729; Plants - 614; Viruses - 0; Other Eukaryotes - 1011 (source: NCBI BLink). & (gnl|cdd|36373 : 257.0) no description available & (gnl|cdd|30718 : 165.0) no description available & (reliability: 1060.0) & (original description: Putative CT166, Description = Putative ferredoxin-NADP reductase, PFAM = PF00175)' T '1.1.5.3' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin reductase' 'niben101scf08609_35031-43169' '(at4g32360 : 641.0) Pyridine nucleotide-disulphide oxidoreductase family protein; FUNCTIONS IN: electron carrier activity, binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Adrenodoxin reductase (InterPro:IPR000759), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADH-dependent glutamate synthase 1 (TAIR:AT5G53460.3); Has 9342 Blast hits to 9327 proteins in 2028 species: Archae - 136; Bacteria - 6683; Metazoa - 218; Fungi - 274; Plants - 105; Viruses - 0; Other Eukaryotes - 1926 (source: NCBI BLink). & (gnl|cdd|37011 : 506.0) no description available & (gnl|cdd|30839 : 136.0) no description available & (reliability: 1282.0) & (original description: Putative MFDR, Description = NADPH:adrenodoxin oxidoreductase, mitochondrial, PFAM = PF07992)' T '1.1.5.3' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin reductase' 'niben101scf08723_247524-251943' '(o04977|fenr1_tobac : 648.0) Ferredoxin--NADP reductase, leaf-type isozyme, chloroplast precursor (EC 1.18.1.2) (FNR) - Nicotiana tabacum (Common tobacco) & (at1g20020 : 588.0) Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the stroma; LEAF FNR 2 (ATLFNR2); FUNCTIONS IN: oxidoreductase activity, poly(U) RNA binding, NADPH dehydrogenase activity; INVOLVED IN: oxidation reduction, defense response to fungus, incompatible interaction, defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Ferredoxin--NADP reductase (InterPro:IPR012146), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferredoxin Reductase (InterPro:IPR015701), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709); BEST Arabidopsis thaliana protein match is: ferredoxin-NADP(+)-oxidoreductase 1 (TAIR:AT5G66190.1); Has 6779 Blast hits to 6779 proteins in 1702 species: Archae - 20; Bacteria - 3601; Metazoa - 804; Fungi - 729; Plants - 614; Viruses - 0; Other Eukaryotes - 1011 (source: NCBI BLink). & (gnl|cdd|36373 : 286.0) no description available & (gnl|cdd|30718 : 192.0) no description available & (reliability: 1176.0) & (original description: Putative fnr, Description = Chloroplast ferredoxin-NADP+ oxidoreductase, PFAM = PF00175)' T '1.1.5.4' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin oxireductase' 'niben101scf01460_470887-482647' '(at1g15140 : 342.0) FAD/NAD(P)-binding oxidoreductase; FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Phenol hydroxylase reductase (InterPro:IPR001221); BEST Arabidopsis thaliana protein match is: ferredoxin-NADP(+)-oxidoreductase 2 (TAIR:AT1G20020.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p43394|k502_actch : 253.0) Fruit protein PKIWI502 - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|30889 : 105.0) no description available & (reliability: 684.0) & (original description: Putative pKIWI502, Description = Fruit protein pKIWI502, PFAM = PF00175)' T '1.1.5.4' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin oxireductase' 'niben101scf05519_263417-271175' '(at3g09150 : 370.0) Required for biosynthesis of the tetrapyrrole phytochrome chromophore phytochromobilin. Encodes phytochromobilin synthase, a ferredoxin-dependent biliverdin reductase. It is necessary for coupling the expression of some nuclear genes to the functional state of the chloroplast.; ELONGATED HYPOCOTYL 2 (HY2); CONTAINS InterPro DOMAIN/s: Ferredoxin-dependent bilin reductase (InterPro:IPR009249); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86999 : 197.0) no description available & (reliability: 740.0) & (original description: Putative HY2, Description = Phytochromobilin:ferredoxin oxidoreductase, chloroplastic, PFAM = PF05996)' T '1.1.5.4' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin oxireductase' 'niben101scf12308_91940-100658' '(at1g15140 : 371.0) FAD/NAD(P)-binding oxidoreductase; FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Phenol hydroxylase reductase (InterPro:IPR001221); BEST Arabidopsis thaliana protein match is: ferredoxin-NADP(+)-oxidoreductase 2 (TAIR:AT1G20020.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p43394|k502_actch : 273.0) Fruit protein PKIWI502 - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|30889 : 99.7) no description available & (reliability: 742.0) & (original description: Putative pKIWI502, Description = Fruit protein pKIWI502, PFAM = PF00175)' T '1.1.6' 'PS.lightreaction.NADH DH' 'nbv0.3scaffold5264_26835-29267' '(p12201|ndhj_tobac : 272.0) NAD(P)H-quinone oxidoreductase chain J, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain J) (NADH-plastoquinone oxidoreductase subunit J) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79231 : 270.0) no description available & (atcg00420 : 242.0) Encodes NADH dehydrogenase subunit J. Its transcription is increased upon sulfur depletion.; NADH dehydrogenase subunit J (NDHJ); FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: cellular response to sulfate starvation, oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 30kDa subunit (InterPro:IPR001268), NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site (InterPro:IPR020396). & (gnl|cdd|36925 : 163.0) no description available & (reliability: 484.0) & (original description: Putative ndhJ, Description = NAD(P)H-quinone oxidoreductase subunit J, chloroplastic, PFAM = PF00329)' T '1.1.6' 'PS.lightreaction.NADH DH' 'nbv0.3scaffold21070_16259-19713' '(at4g37925 : 235.0) Encodes subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly.; subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex (NDH-M); FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor; INVOLVED IN: NADH dehydrogenase complex (plastoquinone) assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast, NAD(P)H dehydrogenase complex (plastoquinone); CONTAINS InterPro DOMAIN/s: NAD(P)H-quinone oxidoreductase subunit M (InterPro:IPR018922); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 470.0) & (original description: Putative ndhM, Description = NAD(P)H-quinone oxidoreductase subunit M, chloroplastic, PFAM = PF10664)' T '1.1.6' 'PS.lightreaction.NADH DH' 'nbv0.3scaffold37024_1-3362' '(at1g74880 : 160.0) Encodes subunit NDH-O of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly.; NAD(P)H:plastoquinone dehydrogenase complex subunit O (NDH-O); FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor; INVOLVED IN: NADH dehydrogenase complex (plastoquinone) assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast, NAD(P)H dehydrogenase complex (plastoquinone); EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)H-quinone oxidoreductase subunit O (InterPro:IPR020905); Has 87 Blast hits to 87 proteins in 27 species: Archae - 0; Bacteria - 33; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative ndhO, Description = NAD(P)H-quinone oxidoreductase subunit O, chloroplastic, PFAM = PF11910)' T '1.1.6' 'PS.lightreaction.NADH DH' 'nbv0.3scaffold64956_156-5315' '(at2g01590 : 84.7) Likely a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located in the membrane fraction of chloroplast. Mutant has impaired NAD(P)H dehydrogenase activity.; CHLORORESPIRATORY REDUCTION 3 (CRR3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast, NAD(P)H dehydrogenase complex (plastoquinone), membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; Has 17 Blast hits to 17 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative PGSC0003DMG400015899, Description = , PFAM = )' T '1.1.6' 'PS.lightreaction.NADH DH' 'nbv0.5scaffold7813_44203-46828' '(p06409|ndhk_tobac : 244.0) NAD(P)H-quinone oxidoreductase chain K, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain K) (NADH-plastoquinone oxidoreductase subunit K) - Nicotiana tabacum (Common tobacco) & (atcg00430 : 218.0) Encodes a protein which was originally thought to be part of photosystem II but its wheat homolog was later shown to encode for subunit K of NADH dehydrogenase.; photosystem II reaction center protein G (PSBG); FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, quinone binding, NADH dehydrogenase (ubiquinone) activity, oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, respiratory chain complex I; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase-like, 20kDa subunit (InterPro:IPR006137), [NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB (InterPro:IPR014406), NADH:ubiquinone oxidoreductase, 20kDa subunit (InterPro:IPR006138); BEST Arabidopsis thaliana protein match is: NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial (TAIR:AT5G11770.1). & (gnl|cdd|36900 : 210.0) no description available & (gnl|cdd|81942 : 200.0) no description available & (reliability: 436.0) & (original description: Putative ndhK, Description = NdhK, PFAM = PF01058)' T '1.1.6' 'PS.lightreaction.NADH DH' 'niben044scf00003145ctg002_1-2097' '(at4g37920 : 181.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36320.1); Has 123 Blast hits to 120 proteins in 40 species: Archae - 2; Bacteria - 11; Metazoa - 8; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative At4g37920, Description = Endoribonuclease E-like protein, PFAM = )' T '1.1.6' 'PS.lightreaction.NADH DH' 'niben044scf00017275ctg025_473-5439' '(at2g01590 : 102.0) Likely a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located in the membrane fraction of chloroplast. Mutant has impaired NAD(P)H dehydrogenase activity.; CHLORORESPIRATORY REDUCTION 3 (CRR3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast, NAD(P)H dehydrogenase complex (plastoquinone), membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; Has 17 Blast hits to 17 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative CRR3, Description = Chlororespiratory reduction 3, PFAM = )' T '1.1.6' 'PS.lightreaction.NADH DH' 'niben044scf00019386ctg000_2182-4539' '(gnl|cdd|79240 : 164.0) no description available & (p52765|nu3c_luplu : 140.0) NAD(P)H-quinone oxidoreductase chain 3, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain 3) (NADH-plastoquinone oxidoreductase chain 3) - Lupinus luteus (European yellow lupin) & (atcg00440 : 134.0) Encodes NADH dehydrogenase D3 subunit of the chloroplast NAD(P)H dehydrogenase complex; NDHC; FUNCTIONS IN: NADH dehydrogenase activity; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 (InterPro:IPR000440); BEST Arabidopsis thaliana protein match is: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein (TAIR:AT2G07751.1). & (gnl|cdd|39861 : 90.8) no description available & (reliability: 268.0) & (original description: Putative ndhC, Description = NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic, PFAM = PF00507)' T '1.1.6' 'PS.lightreaction.NADH DH' 'niben101scf00248_201646-207011' '(at5g58260 : 291.0) Encodes subunit NDH-N of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly.; oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor; INVOLVED IN: defense response to fungus, incompatible interaction, NADH dehydrogenase complex (plastoquinone) assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast, NAD(P)H dehydrogenase complex (plastoquinone); EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)H-quinone oxidoreductase, subunit N (InterPro:IPR020874); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 582.0) & (original description: Putative ndhN, Description = NAD(P)H-quinone oxidoreductase subunit N, chloroplastic, PFAM = PF11909)' T '1.1.6' 'PS.lightreaction.NADH DH' 'niben101scf00313_752379-754106' '(gnl|cdd|79235 : 254.0) no description available & (q32722|nu6c_tobac : 218.0) NAD(P)H-quinone oxidoreductase chain 6, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain 6) (NADH-plastoquinone oxidoreductase chain 6) - Nicotiana tabacum (Common tobacco) & (atcg01080 : 187.0) NADH dehydrogenase ND6; NDHG; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 (InterPro:IPR001457). & (reliability: 374.0) & (original description: Putative ndhG, Description = NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic, PFAM = PF00499)' T '1.1.6' 'PS.lightreaction.NADH DH' 'niben101scf00351_599564-611166' '(at4g37920 : 469.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36320.1); Has 123 Blast hits to 120 proteins in 40 species: Archae - 2; Bacteria - 11; Metazoa - 8; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 938.0) & (original description: Putative At4g37920, Description = Uncharacterized protein At4g37920, chloroplastic, PFAM = )' T '1.1.6' 'PS.lightreaction.NADH DH' 'niben101scf01795_915458-931499' '(at1g74880 : 160.0) Encodes subunit NDH-O of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly.; NAD(P)H:plastoquinone dehydrogenase complex subunit O (NDH-O); FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor; INVOLVED IN: NADH dehydrogenase complex (plastoquinone) assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast, NAD(P)H dehydrogenase complex (plastoquinone); EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)H-quinone oxidoreductase subunit O (InterPro:IPR020905); Has 87 Blast hits to 87 proteins in 27 species: Archae - 0; Bacteria - 33; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative NDHO, Description = NADH dehydrogenase-like complex O, PFAM = PF11910)' T '1.1.6' 'PS.lightreaction.NADH DH' 'niben101scf03786_323856-326329' '(p12201|ndhj_tobac : 308.0) NAD(P)H-quinone oxidoreductase chain J, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain J) (NADH-plastoquinone oxidoreductase subunit J) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79231 : 307.0) no description available & (atcg00420 : 278.0) Encodes NADH dehydrogenase subunit J. Its transcription is increased upon sulfur depletion.; NADH dehydrogenase subunit J (NDHJ); FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: cellular response to sulfate starvation, oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 30kDa subunit (InterPro:IPR001268), NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site (InterPro:IPR020396). & (gnl|cdd|36925 : 195.0) no description available & (reliability: 556.0) & (original description: Putative ndhJ, Description = NAD(P)H-quinone oxidoreductase subunit J, chloroplastic, PFAM = PF00329)' T '1.1.6' 'PS.lightreaction.NADH DH' 'niben101scf05124_124590-127956' '(gnl|cdd|79230 : 705.0) no description available & (p06262|nu4c_tobac : 655.0) NAD(P)H-quinone oxidoreductase chain 4, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain 4) (NADH-plastoquinone oxidoreductase chain 4) - Nicotiana tabacum (Common tobacco) & (atcg01050 : 574.0) Represents a plastid-encoded subunit of a NAD(P)H dehydrogenase complex. Its mRNA is edited at four positions. Translation data is not available for this gene.; NDHD; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: oxidation reduction, ATP synthesis coupled electron transport; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NADH-quinone oxidoreductase, chain M (InterPro:IPR010227), NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750), NADH:ubiquinone oxidoreductase, chain 4 (InterPro:IPR003918); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase subunit 4 (TAIR:ATMG00580.1). & (gnl|cdd|40042 : 348.0) no description available & (reliability: 1148.0) & (original description: Putative ndhD, Description = NADH dehydrogenase subunit 4, PFAM = PF00361)' T '1.1.6' 'PS.lightreaction.NADH DH' 'niben101scf07488_205034-209325' '(at1g70760 : 189.0) a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located on the thylakoid membrane. Mutant has impaired NAD(P)H dehydrogenase activity.; CHLORORESPIRATORY REDUCTION 23 (CRR23); FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: NAD(P)H dehydrogenase complex (plastoquinone), thylakoid membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)H-quinone oxidoreductase subunit L (InterPro:IPR019654); Has 242 Blast hits to 242 proteins in 68 species: Archae - 0; Bacteria - 134; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative ndhL, Description = NAD(P)H-quinone oxidoreductase subunit L, chloroplastic, PFAM = PF10716)' T '1.1.6' 'PS.lightreaction.NADH DH' 'niben101scf08753_33232-42494' '(at4g37925 : 233.0) Encodes subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly.; subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex (NDH-M); FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor; INVOLVED IN: NADH dehydrogenase complex (plastoquinone) assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast, NAD(P)H dehydrogenase complex (plastoquinone); CONTAINS InterPro DOMAIN/s: NAD(P)H-quinone oxidoreductase subunit M (InterPro:IPR018922); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative ndhM, Description = NAD(P)H-quinone oxidoreductase subunit M, chloroplastic, PFAM = PF10664)' T '1.1.6' 'PS.lightreaction.NADH DH' 'niben101scf09870_6019-11178' '(at2g01590 : 84.7) Likely a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located in the membrane fraction of chloroplast. Mutant has impaired NAD(P)H dehydrogenase activity.; CHLORORESPIRATORY REDUCTION 3 (CRR3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast, NAD(P)H dehydrogenase complex (plastoquinone), membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; Has 17 Blast hits to 17 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative PGSC0003DMG400015899, Description = , PFAM = )' T '1.1.30' 'PS.lightreaction.state transition' 'nbv0.3scaffold6334_36102-54048' '(at4g02630 : 599.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G01540.2); Has 118173 Blast hits to 116837 proteins in 4543 species: Archae - 107; Bacteria - 14277; Metazoa - 44024; Fungi - 9538; Plants - 32682; Viruses - 411; Other Eukaryotes - 17134 (source: NCBI BLink). & (gnl|cdd|36401 : 387.0) no description available & (q8lpb4|pskr_dauca : 234.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 164.0) no description available & (reliability: 1198.0) & (original description: Putative At1g01540, Description = Probable serine/threonine-protein kinase At1g01540, PFAM = PF00069;PF00010)' T '1.1.30' 'PS.lightreaction.state transition' 'niben044scf00001139ctg007_4426-8521' '(at1g68830 : 357.0) STN7 protein kinase; required for state transitions, phosphorylation of the major antenna complex (LHCII) between PSII and PSI, and light adaptation; STT7 homolog STN7 (STN7); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: regulation of photosynthesis, light reaction, circadian rhythm; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B1;2 (TAIR:AT2G38620.2); Has 29571 Blast hits to 29413 proteins in 1565 species: Archae - 57; Bacteria - 3753; Metazoa - 11524; Fungi - 3757; Plants - 4496; Viruses - 50; Other Eukaryotes - 5934 (source: NCBI BLink). & (q84v18|stt7_chlre : 139.0) Serine/threonine-protein kinase stt7, chloroplast precursor (EC 2.7.11.1) - Chlamydomonas reinhardtii & (reliability: 714.0) & (original description: Putative SNT, Description = Serine/threonine-protein kinase, PFAM = )' T '1.1.30' 'PS.lightreaction.state transition' 'niben044scf00010856ctg005_1-5486' '(at1g01540 : 171.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G01330.1); Has 118949 Blast hits to 117566 proteins in 4483 species: Archae - 118; Bacteria - 14365; Metazoa - 43793; Fungi - 9783; Plants - 32976; Viruses - 455; Other Eukaryotes - 17459 (source: NCBI BLink). & (gnl|cdd|36401 : 154.0) no description available & (q8lpb4|pskr_dauca : 102.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 91.0) no description available & (reliability: 330.0) & (original description: Putative umc1285, Description = Putative serine/threonine-protein kinase, PFAM = PF07714)' T '1.1.30' 'PS.lightreaction.state transition' 'niben044scf00022228ctg009_12706-16541' '(at1g68830 : 333.0) STN7 protein kinase; required for state transitions, phosphorylation of the major antenna complex (LHCII) between PSII and PSI, and light adaptation; STT7 homolog STN7 (STN7); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: regulation of photosynthesis, light reaction, circadian rhythm; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B1;2 (TAIR:AT2G38620.2); Has 29571 Blast hits to 29413 proteins in 1565 species: Archae - 57; Bacteria - 3753; Metazoa - 11524; Fungi - 3757; Plants - 4496; Viruses - 50; Other Eukaryotes - 5934 (source: NCBI BLink). & (q84v18|stt7_chlre : 80.1) Serine/threonine-protein kinase stt7, chloroplast precursor (EC 2.7.11.1) - Chlamydomonas reinhardtii & (reliability: 666.0) & (original description: Putative STN7, Description = Serine/threonine-protein kinase stt7, chloroplastic, PFAM = )' T '1.1.30' 'PS.lightreaction.state transition' 'niben044scf00025441ctg004_1-4934' '(at1g01540 : 540.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G01330.1); Has 118949 Blast hits to 117566 proteins in 4483 species: Archae - 118; Bacteria - 14365; Metazoa - 43793; Fungi - 9783; Plants - 32976; Viruses - 455; Other Eukaryotes - 17459 (source: NCBI BLink). & (gnl|cdd|36401 : 385.0) no description available & (q8lpb4|pskr_dauca : 240.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 161.0) no description available & (reliability: 1080.0) & (original description: Putative Sb06g016790, Description = Putative uncharacterized protein Sb06g016790, PFAM = PF00069)' T '1.1.30' 'PS.lightreaction.state transition' 'niben044scf00058842ctg000_16102-18266' '(at4g01330 : 88.6) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G01540.2). & (reliability: 177.2) & (original description: Putative)' T '1.1.30' 'PS.lightreaction.state transition' 'niben101scf03114_404347-429852' '(at1g01540 : 287.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G01330.1); Has 118949 Blast hits to 117566 proteins in 4483 species: Archae - 118; Bacteria - 14365; Metazoa - 43793; Fungi - 9783; Plants - 32976; Viruses - 455; Other Eukaryotes - 17459 (source: NCBI BLink). & (gnl|cdd|36401 : 258.0) no description available & (q8l4h4|nork_medtr : 145.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 115.0) no description available & (reliability: 568.0) & (original description: Putative umc1285, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '1.1.30' 'PS.lightreaction.state transition' 'niben101scf03254_417959-427775' '(at1g68830 : 844.0) STN7 protein kinase; required for state transitions, phosphorylation of the major antenna complex (LHCII) between PSII and PSI, and light adaptation; STT7 homolog STN7 (STN7); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: regulation of photosynthesis, light reaction, circadian rhythm; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B1;2 (TAIR:AT2G38620.2); Has 29571 Blast hits to 29413 proteins in 1565 species: Archae - 57; Bacteria - 3753; Metazoa - 11524; Fungi - 3757; Plants - 4496; Viruses - 50; Other Eukaryotes - 5934 (source: NCBI BLink). & (q84v18|stt7_chlre : 314.0) Serine/threonine-protein kinase stt7, chloroplast precursor (EC 2.7.11.1) - Chlamydomonas reinhardtii & (gnl|cdd|35814 : 172.0) no description available & (gnl|cdd|84488 : 99.6) no description available & (reliability: 1688.0) & (original description: Putative STN7, Description = Serine/threonine-protein kinase STN7, chloroplastic, PFAM = PF00069)' T '1.1.30' 'PS.lightreaction.state transition' 'niben101scf04007_455679-461041' '(at4g02630 : 535.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G01540.2); Has 118173 Blast hits to 116837 proteins in 4543 species: Archae - 107; Bacteria - 14277; Metazoa - 44024; Fungi - 9538; Plants - 32682; Viruses - 411; Other Eukaryotes - 17134 (source: NCBI BLink). & (gnl|cdd|36401 : 384.0) no description available & (q8lpb4|pskr_dauca : 241.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 161.0) no description available & (reliability: 1070.0) & (original description: Putative At1g01540, Description = Probable serine/threonine-protein kinase At1g01540, PFAM = PF00069)' T '1.1.30' 'PS.lightreaction.state transition' 'niben101scf04995_7494-23810' '(at4g02630 : 594.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G01540.2); Has 118173 Blast hits to 116837 proteins in 4543 species: Archae - 107; Bacteria - 14277; Metazoa - 44024; Fungi - 9538; Plants - 32682; Viruses - 411; Other Eukaryotes - 17134 (source: NCBI BLink). & (gnl|cdd|36401 : 386.0) no description available & (q8lpb4|pskr_dauca : 235.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 162.0) no description available & (reliability: 1188.0) & (original description: Putative At1g01540, Description = Probable serine/threonine-protein kinase At1g01540, PFAM = PF00010;PF00069)' T '1.1.30' 'PS.lightreaction.state transition' 'niben101scf07576_441549-446760' '(at1g01540 : 667.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G01330.1); Has 118949 Blast hits to 117566 proteins in 4483 species: Archae - 118; Bacteria - 14365; Metazoa - 43793; Fungi - 9783; Plants - 32976; Viruses - 455; Other Eukaryotes - 17459 (source: NCBI BLink). & (gnl|cdd|36401 : 388.0) no description available & (q8lpb4|pskr_dauca : 249.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 160.0) no description available & (reliability: 1330.0) & (original description: Putative At1g01540, Description = Probable serine/threonine-protein kinase At1g01540, PFAM = PF00069)' T '1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'nbv0.3scaffold62520_9899-11211' '(gnl|cdd|79234 : 144.0) no description available & (p06261|nu4lc_tobac : 112.0) NAD(P)H-quinone oxidoreductase chain 4L, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain 4L) (NADH-plastoquinone oxidoreductase chain 4L) - Nicotiana tabacum (Common tobacco) & (atcg01070 : 102.0) NADH dehydrogenase ND4L; NDHE; FUNCTIONS IN: NADPH dehydrogenase activity; INVOLVED IN: ubiquinone biosynthetic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/quinone oxidoreductase, chain 4L (InterPro:IPR001133). & (reliability: 204.0) & (original description: Putative ndhE, Description = NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic, PFAM = PF00420)' T '1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'nbv0.5scaffold8786_24862-28695' '(gnl|cdd|79267 : 303.0) no description available & (q2vec1|nu2c_soltu : 223.0) NAD(P)H-quinone oxidoreductase chain 2, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain 2) (NADH-plastoquinone oxidoreductase chain 2) - Solanum tuberosum (Potato) & (atcg01250 : 209.0) NADH dehydrogenase ND2; NDHB.2; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: oxidation reduction, ATP synthesis coupled electron transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH-Ubiquinone/plastoquinone (complex I) protein (TAIR:ATCG00890.1). & (gnl|cdd|39867 : 119.0) no description available & (reliability: 418.0) & (original description: Putative ndhB, Description = NADH dehydrogenase subunit B, PFAM = PF00361)' T '1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'nbv0.5scaffold8786_26099-28602' '(gnl|cdd|79267 : 277.0) no description available & (q2vec1|nu2c_soltu : 191.0) NAD(P)H-quinone oxidoreductase chain 2, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain 2) (NADH-plastoquinone oxidoreductase chain 2) - Solanum tuberosum (Potato) & (atcg01250 : 184.0) NADH dehydrogenase ND2; NDHB.2; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: oxidation reduction, ATP synthesis coupled electron transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH-Ubiquinone/plastoquinone (complex I) protein (TAIR:ATCG00890.1). & (gnl|cdd|39867 : 111.0) no description available & (reliability: 368.0) & (original description: Putative ndhB, Description = NADH dehydrogenase subunit B, PFAM = PF00361)' T '1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben044scf00004772ctg005_3565-7292' '(at1g64770 : 378.0) encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP.; NDH-dependent cyclic electron flow 1 (NDF2); BEST Arabidopsis thaliana protein match is: NDH-dependent cyclic electron flow 5 (TAIR:AT1G55370.2). & (reliability: 756.0) & (original description: Putative PNSB2, Description = Photosynthetic NDH subunit of subcomplex B 2, chloroplastic, PFAM = )' T '1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben044scf00032016ctg004_3784-6335' '(gnl|cdd|79250 : 267.0) no description available & (p06254|nu1c_tobac : 265.0) NAD(P)H-quinone oxidoreductase subunit 1, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 1) (NDH subunit 1) (NADH-plastoquinone oxidoreductase subunit 1) - Nicotiana tabacum (Common tobacco) & (atcg01100 : 219.0) NADH dehydrogenase ND1; NDHA; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit 1 (InterPro:IPR001694), NADH:ubiquinone oxidoreductase, subunit 1, conserved site (InterPro:IPR018086); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 1A (TAIR:ATMG01275.1). & (gnl|cdd|39967 : 151.0) no description available & (reliability: 438.0) & (original description: Putative ndhA, Description = NdhA protein, PFAM = PF00146)' T '1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf00313_754107-755806' '(p06252|ndhi_tobac : 341.0) NAD(P)H-quinone oxidoreductase subunit I, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit I) (NDH subunit I) (NADH-plastoquinone oxidoreductase subunit I) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79233 : 341.0) no description available & (atcg01090 : 326.0) Encodes subunit of the chloroplast NAD(P)H dehydrogenase complex; NDHI; FUNCTIONS IN: NADPH dehydrogenase activity; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NADH-plastoquinone oxidoreductase, subunit I (InterPro:IPR004497), 4Fe-4S binding domain (InterPro:IPR001450), NADH-quinone oxidoreductase, chain I (InterPro:IPR010226), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), Alpha-helical ferredoxin (InterPro:IPR009051); BEST Arabidopsis thaliana protein match is: Alpha-helical ferredoxin (TAIR:AT1G16700.1). & (gnl|cdd|38466 : 222.0) no description available & (reliability: 652.0) & (original description: Putative ndhI, Description = NAD(P)H-quinone oxidoreductase subunit I, chloroplastic, PFAM = PF13187)' T '1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf00490_144016-150689' '(at4g22890 : 439.0) Encodes PGRL1A, a transmembrane protein present in thylakoids. PGRL1A has a highly homologous isoform PGRL1B encoded by At4g11960. Plants lacking PGRL1 show perturbation of cyclic electron flow, similar to PGR5-deficient plants. PGRL1 and PGR5 interact physically and associate with PSI (photosystem I).; PGR5-LIKE A; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthetic electron transport in photosystem I, photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PGR5-like B (TAIR:AT4G11960.1); Has 112 Blast hits to 112 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 878.0) & (original description: Putative PGRL1A, Description = PGR5-like protein 1A, chloroplastic, PFAM = )' T '1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf01054_322518-327377' '(at3g15840 : 354.0) Encodes a chloroplast-targeted protein localized in the stroma that is a novel component essential for NDH-mediated non-photochemical reduction of the plastoquinone pool in chlororespiratory electron transport.; post-illumination chlorophyll fluorescence increase (PIFI); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chlororespiration; LOCATED IN: chloroplast stroma; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 708.0) & (original description: Putative PIFI, Description = Post-illumination chlorophyll fluorescence increase protein, PFAM = )' T '1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf01111_82276-89082' '(at4g22890 : 397.0) Encodes PGRL1A, a transmembrane protein present in thylakoids. PGRL1A has a highly homologous isoform PGRL1B encoded by At4g11960. Plants lacking PGRL1 show perturbation of cyclic electron flow, similar to PGR5-deficient plants. PGRL1 and PGR5 interact physically and associate with PSI (photosystem I).; PGR5-LIKE A; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthetic electron transport in photosystem I, photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PGR5-like B (TAIR:AT4G11960.1); Has 112 Blast hits to 112 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 794.0) & (original description: Putative PGRL1A, Description = PGR5-like protein 1A, chloroplastic, PFAM = )' T '1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf01164_173367-175900' '(q2vec1|nu2c_soltu : 249.0) NAD(P)H-quinone oxidoreductase chain 2, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain 2) (NADH-plastoquinone oxidoreductase chain 2) - Solanum tuberosum (Potato) & (atcg01250 : 243.0) NADH dehydrogenase ND2; NDHB.2; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: oxidation reduction, ATP synthesis coupled electron transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH-Ubiquinone/plastoquinone (complex I) protein (TAIR:ATCG00890.1). & (gnl|cdd|79267 : 228.0) no description available & (gnl|cdd|39867 : 89.2) no description available & (reliability: 486.0) & (original description: Putative ndhB, Description = NADH-plastoquinone oxidoreductase subunit 2, PFAM = PF00361)' T '1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf01556_311211-317372' '(at4g22260 : 452.0) Similar to mitochondrial alternative oxidase. im mutants have a variegated phenotype and fail to differentiate chloroplasts in the majority of their cells under high light intensity continuous illumination. The white tissues of immutans accumulate phytoene, a non-colored C40 carotenoid intermediate. This suggests that immutans controls, either directly or indirectly, the activity of phytoene desaturase (PDS), the enzyme that converts phytoene to zeta-carotene in higher plants. However, im is not the structural gene for PDS. It is located in the lumenar face of the thylakoid membrane. IM is expressed ubiquitously in plant tissues.; IMMUTANS (IM); CONTAINS InterPro DOMAIN/s: Alternative oxidase (InterPro:IPR002680); BEST Arabidopsis thaliana protein match is: alternative oxidase 2 (TAIR:AT5G64210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29780 : 251.0) no description available & (reliability: 904.0) & (original description: Putative AOX4, Description = Ubiquinol oxidase 4, chloroplastic/chromoplastic, PFAM = PF01786)' T '1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf02762_220229-223975' '(gnl|cdd|79236 : 810.0) no description available & (p12133|ndhh_tobac : 796.0) NAD(P)H-quinone oxidoreductase chain H, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain H) (NADH-plastoquinone oxidoreductase 49 kDa subunit) - Nicotiana tabacum (Common tobacco) & (atcg01110 : 739.0) Encodes the 49KDa plastid NAD(P)H dehydrogenase subunit H protein. Its transcription is regulated by an ndhF-specific plastid sigma factor, SIG4.; NAD(P)H dehydrogenase subunit H (NDHH); FUNCTIONS IN: NADPH dehydrogenase activity; INVOLVED IN: photosynthetic electron transport in photosystem II; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NADH-quinone oxidoreductase, subunit D (InterPro:IPR001135), NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site (InterPro:IPR014029); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase subunit 7 (TAIR:ATMG00510.1). & (gnl|cdd|38081 : 590.0) no description available & (reliability: 1478.0) & (original description: Putative ndhH, Description = NAD(P)H-quinone oxidoreductase subunit H, chloroplastic, PFAM = PF00346;PF00146)' T '1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf02762_221764-225649' '(gnl|cdd|79250 : 628.0) no description available & (q3c1p9|nu1c_nicsy : 574.0) NAD(P)H-quinone oxidoreductase subunit 1, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 1) (NDH subunit 1) (NADH-plastoquinone oxidoreductase subunit 1) - Nicotiana sylvestris (Wood tobacco) & (atcg01100 : 500.0) NADH dehydrogenase ND1; NDHA; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit 1 (InterPro:IPR001694), NADH:ubiquinone oxidoreductase, subunit 1, conserved site (InterPro:IPR018086); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 1A (TAIR:ATMG01275.1). & (gnl|cdd|39967 : 321.0) no description available & (reliability: 1000.0) & (original description: Putative ndhA, Description = NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic, PFAM = PF00146)' T '1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf03546_10320-16663' '(at4g22260 : 425.0) Similar to mitochondrial alternative oxidase. im mutants have a variegated phenotype and fail to differentiate chloroplasts in the majority of their cells under high light intensity continuous illumination. The white tissues of immutans accumulate phytoene, a non-colored C40 carotenoid intermediate. This suggests that immutans controls, either directly or indirectly, the activity of phytoene desaturase (PDS), the enzyme that converts phytoene to zeta-carotene in higher plants. However, im is not the structural gene for PDS. It is located in the lumenar face of the thylakoid membrane. IM is expressed ubiquitously in plant tissues.; IMMUTANS (IM); CONTAINS InterPro DOMAIN/s: Alternative oxidase (InterPro:IPR002680); BEST Arabidopsis thaliana protein match is: alternative oxidase 2 (TAIR:AT5G64210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29780 : 249.0) no description available & (reliability: 850.0) & (original description: Putative AOX4, Description = Ubiquinol oxidase 4, chloroplastic/chromoplastic, PFAM = PF01786)' T '1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf04875_19327-21826' '(gnl|cdd|79267 : 176.0) no description available & (q9ld71|nu2c_spiol : 112.0) NAD(P)H-quinone oxidoreductase chain 2, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain 2) (NADH-plastoquinone oxidoreductase chain 2) - Spinacia oleracea (Spinach) & (atcg01250 : 108.0) NADH dehydrogenase ND2; NDHB.2; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: oxidation reduction, ATP synthesis coupled electron transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH-Ubiquinone/plastoquinone (complex I) protein (TAIR:ATCG00890.1). & (reliability: 216.0) & (original description: Putative ndh2, Description = NAD(P)H dehydrogenase subunit 2, PFAM = PF00361)' T '1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf05124_127426-128859' '(gnl|cdd|79234 : 157.0) no description available & (p06261|nu4lc_tobac : 120.0) NAD(P)H-quinone oxidoreductase chain 4L, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain 4L) (NADH-plastoquinone oxidoreductase chain 4L) - Nicotiana tabacum (Common tobacco) & (atcg01070 : 110.0) NADH dehydrogenase ND4L; NDHE; FUNCTIONS IN: NADPH dehydrogenase activity; INVOLVED IN: ubiquinone biosynthetic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/quinone oxidoreductase, chain 4L (InterPro:IPR001133). & (gnl|cdd|39868 : 80.7) no description available & (reliability: 220.0) & (original description: Putative ndhE, Description = NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic, PFAM = PF00420)' T '1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf09623_30260-34430' '(at1g64770 : 377.0) encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP.; NDH-dependent cyclic electron flow 1 (NDF2); BEST Arabidopsis thaliana protein match is: NDH-dependent cyclic electron flow 5 (TAIR:AT1G55370.2). & (reliability: 754.0) & (original description: Putative PNSB2, Description = Photosynthetic NDH subunit of subcomplex B 2, chloroplastic, PFAM = )' T '1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf10324_197625-201530' '(at2g05620 : 144.0) Involved in electron flow in Photosystem I. Essential for photoprotection.; proton gradient regulation 5 (PGR5); FUNCTIONS IN: electron carrier activity; INVOLVED IN: response to water deprivation, response to high light intensity, photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast thylakoid; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 15 growth stages; Has 90 Blast hits to 90 proteins in 40 species: Archae - 0; Bacteria - 18; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative PGR5, Description = Proton gradient regulation 5, PFAM = )' T '1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'niben101scf20959_1-1862' '(gnl|cdd|79267 : 228.0) no description available & (q9ld71|nu2c_spiol : 169.0) NAD(P)H-quinone oxidoreductase chain 2, chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain 2) (NADH-plastoquinone oxidoreductase chain 2) - Spinacia oleracea (Spinach) & (atcg01250 : 161.0) NADH dehydrogenase ND2; NDHB.2; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: oxidation reduction, ATP synthesis coupled electron transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH-Ubiquinone/plastoquinone (complex I) protein (TAIR:ATCG00890.1). & (gnl|cdd|39867 : 85.0) no description available & (reliability: 322.0) & (original description: Putative ndhB, Description = NADH dehydrogenase subunit B, PFAM = PF00361)' T '1.1.50' 'PS.lightreaction.NPQ' '' '' '1.1.60' 'PS.lightreaction.state transition' '' '' '1.1.70' 'PS.lightreaction.hydrogenase' '' '' '1.1.70.1' 'PS.lightreaction.hydrogenase.FeFe-hydrogenase' '' '' '1.1.70.2' 'PS.lightreaction.hydrogenase.NiFe-hydrogenase' '' '' '1.1.99' 'PS.lightreaction.unspecified' '' '' '1.1.99.1' 'PS.lightreaction.unspecified.TEF' '' '' '1.1.1001' 'PS.lightreaction' 'phytol' 'PS.lightreaction, chlorophyll' M '1.1.1002' 'PS.lightreaction.binding proteins.Chlorophyll a' 'chlorophyll a' 'PS.lightreaction, chlorophyll' M '1.1.1003' 'PS.lightreaction.binding proteins.Chlorophyll b' 'chlorophyll b' 'PS.lightreaction, chlorophyll' M '1.1.1004' 'PS.lightreaction.PS II.PQ' 'decyl-plastoquinone' 'PS.lightreaction' M '1.2' 'PS.photorespiration' 'niben101scf03710_635081-641440' '(at4g17360 : 470.0) encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle.; Formyl transferase; FUNCTIONS IN: methyltransferase activity, hydroxymethyl-, formyl- and related transferase activity, formyltetrahydrofolate deformylase activity; INVOLVED IN: tetrahydrofolate metabolic process, purine ribonucleotide biosynthetic process, biosynthetic process, photorespiration; LOCATED IN: mitochondrion; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide formyltransferase, active site (InterPro:IPR001555), Formyltetrahydrofolate deformylase (InterPro:IPR004810), Formyl transferase, N-terminal (InterPro:IPR002376); BEST Arabidopsis thaliana protein match is: formyltetrahydrofolate deformylase, putative (TAIR:AT5G47435.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|81819 : 292.0) no description available & (gnl|cdd|38286 : 191.0) no description available & (reliability: 940.0) & (original description: Putative purU, Description = Formyltetrahydrofolate deformylase, PFAM = PF00551)' T '1.2' 'PS.photorespiration' 'niben101scf03772_255373-267109' '(at4g17360 : 473.0) encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle.; Formyl transferase; FUNCTIONS IN: methyltransferase activity, hydroxymethyl-, formyl- and related transferase activity, formyltetrahydrofolate deformylase activity; INVOLVED IN: tetrahydrofolate metabolic process, purine ribonucleotide biosynthetic process, biosynthetic process, photorespiration; LOCATED IN: mitochondrion; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide formyltransferase, active site (InterPro:IPR001555), Formyltetrahydrofolate deformylase (InterPro:IPR004810), Formyl transferase, N-terminal (InterPro:IPR002376); BEST Arabidopsis thaliana protein match is: formyltetrahydrofolate deformylase, putative (TAIR:AT5G47435.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|81819 : 290.0) no description available & (gnl|cdd|38286 : 202.0) no description available & (reliability: 946.0) & (original description: Putative PURU2, Description = Formyltetrahydrofolate deformylase 2, mitochondrial, PFAM = PF00551)' T '1.2.1' 'PS.photorespiration.phosphoglycolate phosphatase' 'niben044scf00001361ctg005_36749-45221' '(at5g36700 : 401.0) 2-phosphoglycolate phosphatase 1 (PGLP1); FUNCTIONS IN: phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIA (InterPro:IPR006357), 2-phosphoglycolate phosphatase, eukaryotic (InterPro:IPR006349); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G36790.3). & (gnl|cdd|38093 : 334.0) no description available & (gnl|cdd|30992 : 204.0) no description available & (reliability: 802.0) & (original description: Putative PGLP1A, Description = Phosphoglycolate phosphatase 1A, chloroplastic, PFAM = PF13242;PF13344)' T '1.2.1' 'PS.photorespiration.phosphoglycolate phosphatase' 'niben101scf08947_105531-117042' '(at5g36700 : 493.0) 2-phosphoglycolate phosphatase 1 (PGLP1); FUNCTIONS IN: phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIA (InterPro:IPR006357), 2-phosphoglycolate phosphatase, eukaryotic (InterPro:IPR006349); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G36790.3). & (gnl|cdd|38093 : 391.0) no description available & (gnl|cdd|30992 : 226.0) no description available & (reliability: 986.0) & (original description: Putative PGLP1A, Description = Phosphoglycolate phosphatase 1A, chloroplastic, PFAM = PF13344;PF13242)' T '1.2.1' 'PS.photorespiration.phosphoglycolate phosphatase' 'niben101scf11126_855389-863617' '(at5g36700 : 489.0) 2-phosphoglycolate phosphatase 1 (PGLP1); FUNCTIONS IN: phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIA (InterPro:IPR006357), 2-phosphoglycolate phosphatase, eukaryotic (InterPro:IPR006349); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G36790.3). & (gnl|cdd|38093 : 392.0) no description available & (gnl|cdd|30992 : 226.0) no description available & (reliability: 978.0) & (original description: Putative PGP, Description = Phosphoglycolate phosphatase, PFAM = PF13242;PF13344)' T '1.2.2' 'PS.photorespiration.glycolate oxydase' 'niben044scf00001920ctg014_28684-31544' '(gnl|cdd|35758 : 161.0) no description available & (at3g14150 : 158.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity, oxidoreductase activity, FMN binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: peroxisome; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14130.1); Has 14086 Blast hits to 14066 proteins in 2250 species: Archae - 261; Bacteria - 6825; Metazoa - 476; Fungi - 830; Plants - 349; Viruses - 0; Other Eukaryotes - 5345 (source: NCBI BLink). & (gnl|cdd|85224 : 129.0) no description available & (p05414|gox_spiol : 124.0) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) & (reliability: 316.0) & (original description: Putative go1, Description = Peroxisomal (S)-2-hydroxy-acid oxidase GLO1, PFAM = PF01070)' T '1.2.2' 'PS.photorespiration.glycolate oxydase' 'niben044scf00001920ctg014_28933-33558' '(at3g14130 : 541.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity, oxidoreductase activity, FMN binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14150.2); Has 13074 Blast hits to 13056 proteins in 2002 species: Archae - 228; Bacteria - 6055; Metazoa - 447; Fungi - 755; Plants - 289; Viruses - 0; Other Eukaryotes - 5300 (source: NCBI BLink). & (gnl|cdd|35758 : 525.0) no description available & (gnl|cdd|85224 : 433.0) no description available & (p05414|gox_spiol : 429.0) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) & (reliability: 1082.0) & (original description: Putative GLO3, Description = Peroxisomal (S)-2-hydroxy-acid oxidase GLO3, PFAM = PF01070)' T '1.2.2' 'PS.photorespiration.glycolate oxydase' 'niben044scf00043092ctg002_77-5699' '(p05414|gox_spiol : 621.0) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) & (at3g14420 : 615.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: apoplast, chloroplast, peroxisome, membrane; EXPRESSED IN: cotyledon, guard cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14415.3); Has 11354 Blast hits to 11340 proteins in 1837 species: Archae - 148; Bacteria - 5331; Metazoa - 369; Fungi - 687; Plants - 262; Viruses - 0; Other Eukaryotes - 4557 (source: NCBI BLink). & (gnl|cdd|35758 : 582.0) no description available & (gnl|cdd|85224 : 501.0) no description available & (reliability: 1230.0) & (original description: Putative GLO1, Description = Peroxisomal (S)-2-hydroxy-acid oxidase GLO1, PFAM = PF01070)' T '1.2.2' 'PS.photorespiration.glycolate oxydase' 'niben101scf00622_14191-22429' '(at4g18360 : 641.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity, oxidoreductase activity, FMN binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14420.2); Has 9948 Blast hits to 9918 proteins in 1541 species: Archae - 28; Bacteria - 4496; Metazoa - 367; Fungi - 686; Plants - 255; Viruses - 0; Other Eukaryotes - 4116 (source: NCBI BLink). & (p05414|gox_spiol : 630.0) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) & (gnl|cdd|35758 : 586.0) no description available & (gnl|cdd|85224 : 502.0) no description available & (reliability: 1282.0) & (original description: Putative GLO5, Description = Peroxisomal (S)-2-hydroxy-acid oxidase GLO5, PFAM = PF01070)' T '1.2.2' 'PS.photorespiration.glycolate oxydase' 'niben101scf00897_165734-171136' '(p05414|gox_spiol : 647.0) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) & (at3g14420 : 644.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: apoplast, chloroplast, peroxisome, membrane; EXPRESSED IN: cotyledon, guard cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14415.3); Has 11354 Blast hits to 11340 proteins in 1837 species: Archae - 148; Bacteria - 5331; Metazoa - 369; Fungi - 687; Plants - 262; Viruses - 0; Other Eukaryotes - 4557 (source: NCBI BLink). & (gnl|cdd|35758 : 583.0) no description available & (gnl|cdd|85224 : 504.0) no description available & (reliability: 1288.0) & (original description: Putative GLO1, Description = Peroxisomal (S)-2-hydroxy-acid oxidase GLO1, PFAM = PF01070)' T '1.2.2' 'PS.photorespiration.glycolate oxydase' 'niben101scf01517_529099-534771' '(p05414|gox_spiol : 627.0) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) & (at3g14420 : 619.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: apoplast, chloroplast, peroxisome, membrane; EXPRESSED IN: cotyledon, guard cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14415.3); Has 11354 Blast hits to 11340 proteins in 1837 species: Archae - 148; Bacteria - 5331; Metazoa - 369; Fungi - 687; Plants - 262; Viruses - 0; Other Eukaryotes - 4557 (source: NCBI BLink). & (gnl|cdd|35758 : 583.0) no description available & (gnl|cdd|85224 : 500.0) no description available & (reliability: 1238.0) & (original description: Putative GLO5, Description = Peroxisomal (S)-2-hydroxy-acid oxidase GLO5, PFAM = PF01070)' T '1.2.2' 'PS.photorespiration.glycolate oxydase' 'niben101scf04174_493908-499254' '(p05414|gox_spiol : 648.0) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) & (at3g14420 : 645.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: apoplast, chloroplast, peroxisome, membrane; EXPRESSED IN: cotyledon, guard cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14415.3); Has 11354 Blast hits to 11340 proteins in 1837 species: Archae - 148; Bacteria - 5331; Metazoa - 369; Fungi - 687; Plants - 262; Viruses - 0; Other Eukaryotes - 4557 (source: NCBI BLink). & (gnl|cdd|35758 : 584.0) no description available & (gnl|cdd|85224 : 504.0) no description available & (reliability: 1290.0) & (original description: Putative GLO1, Description = Peroxisomal (S)-2-hydroxy-acid oxidase GLO1, PFAM = PF01070)' T '1.2.2' 'PS.photorespiration.glycolate oxydase' 'niben101scf05396_791187-795464' '(at3g14420 : 426.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: apoplast, chloroplast, peroxisome, membrane; EXPRESSED IN: cotyledon, guard cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14415.3); Has 11354 Blast hits to 11340 proteins in 1837 species: Archae - 148; Bacteria - 5331; Metazoa - 369; Fungi - 687; Plants - 262; Viruses - 0; Other Eukaryotes - 4557 (source: NCBI BLink). & (p05414|gox_spiol : 421.0) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) & (gnl|cdd|35758 : 400.0) no description available & (gnl|cdd|85224 : 348.0) no description available & (reliability: 852.0) & (original description: Putative go, Description = Hydroxyacid oxidase 1, PFAM = PF01070)' T '1.2.2' 'PS.photorespiration.glycolate oxydase' 'niben101scf07798_319241-325315' '(at3g14130 : 541.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity, oxidoreductase activity, FMN binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14150.2); Has 13074 Blast hits to 13056 proteins in 2002 species: Archae - 228; Bacteria - 6055; Metazoa - 447; Fungi - 755; Plants - 289; Viruses - 0; Other Eukaryotes - 5300 (source: NCBI BLink). & (gnl|cdd|35758 : 520.0) no description available & (gnl|cdd|85224 : 442.0) no description available & (p05414|gox_spiol : 428.0) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) & (reliability: 1082.0) & (original description: Putative GOX, Description = Peroxisomal glycolate oxidase, PFAM = PF01070)' T '1.2.2' 'PS.photorespiration.glycolate oxydase' 'niben101scf18000_37063-43238' '(at3g14130 : 539.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity, oxidoreductase activity, FMN binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14150.2); Has 13074 Blast hits to 13056 proteins in 2002 species: Archae - 228; Bacteria - 6055; Metazoa - 447; Fungi - 755; Plants - 289; Viruses - 0; Other Eukaryotes - 5300 (source: NCBI BLink). & (gnl|cdd|35758 : 522.0) no description available & (gnl|cdd|85224 : 431.0) no description available & (p05414|gox_spiol : 429.0) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) & (reliability: 1078.0) & (original description: Putative GLO3, Description = Peroxisomal (S)-2-hydroxy-acid oxidase GLO3, PFAM = PF01070)' T '1.2.2' 'PS.photorespiration.glycolate oxydase' 'niben101scf18000_42790-48158' '(at3g14150 : 500.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity, oxidoreductase activity, FMN binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: peroxisome; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14130.1); Has 14086 Blast hits to 14066 proteins in 2250 species: Archae - 261; Bacteria - 6825; Metazoa - 476; Fungi - 830; Plants - 349; Viruses - 0; Other Eukaryotes - 5345 (source: NCBI BLink). & (gnl|cdd|35758 : 482.0) no description available & (gnl|cdd|85224 : 407.0) no description available & (p05414|gox_spiol : 398.0) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) & (reliability: 1000.0) & (original description: Putative go1, Description = Hydroxyacid oxidase 1, PFAM = PF01070)' T '1.2.3' 'PS.photorespiration.aminotransferases peroxisomal' 'niben101scf00797_1849693-1855908' '(at2g13360 : 728.0) Encodes a peroxisomal photorespiratory enzyme that catalyzes transamination reactions with multiple substrates. It is involved in photorespiration.; alanine:glyoxylate aminotransferase (AGT); FUNCTIONS IN: serine-pyruvate transaminase activity, serine-glyoxylate transaminase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: apoplast, peroxisome, plasma membrane, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Aminotransferase class-V pyridoxal-phosphate binding site (InterPro:IPR020578), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); Has 6407 Blast hits to 6405 proteins in 1610 species: Archae - 309; Bacteria - 3905; Metazoa - 186; Fungi - 125; Plants - 148; Viruses - 0; Other Eukaryotes - 1734 (source: NCBI BLink). & (gnl|cdd|38073 : 463.0) no description available & (gnl|cdd|30424 : 379.0) no description available & (p84187|sgat_maize : 102.0) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT) (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) (Fragments) - Zea mays (Maize) & (reliability: 1456.0) & (original description: Putative AGT1, Description = Serine--glyoxylate aminotransferase, PFAM = PF00266)' T '1.2.3' 'PS.photorespiration.aminotransferases peroxisomal' 'niben101scf01917_1321680-1328123' '(at1g70580 : 863.0) Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro.; alanine-2-oxoglutarate aminotransferase 2 (AOAT2); FUNCTIONS IN: glycine:2-oxoglutarate aminotransferase activity, L-alanine:2-oxoglutarate aminotransferase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: glutamate:glyoxylate aminotransferase (TAIR:AT1G23310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35479 : 695.0) no description available & (p52894|ala2_horvu : 488.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|82896 : 191.0) no description available & (reliability: 1726.0) & (original description: Putative GGAT2, Description = Glutamate--glyoxylate aminotransferase 2, PFAM = PF00155)' T '1.2.3' 'PS.photorespiration.aminotransferases peroxisomal' 'niben101scf02937_428544-438037' '(at1g70580 : 887.0) Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro.; alanine-2-oxoglutarate aminotransferase 2 (AOAT2); FUNCTIONS IN: glycine:2-oxoglutarate aminotransferase activity, L-alanine:2-oxoglutarate aminotransferase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: glutamate:glyoxylate aminotransferase (TAIR:AT1G23310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35479 : 712.0) no description available & (p52894|ala2_horvu : 507.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|30785 : 188.0) no description available & (reliability: 1774.0) & (original description: Putative GGAT2, Description = Glutamate--glyoxylate aminotransferase 2, PFAM = PF00155)' T '1.2.3' 'PS.photorespiration.aminotransferases peroxisomal' 'niben101scf07123_1335-5945' '(at2g13360 : 656.0) Encodes a peroxisomal photorespiratory enzyme that catalyzes transamination reactions with multiple substrates. It is involved in photorespiration.; alanine:glyoxylate aminotransferase (AGT); FUNCTIONS IN: serine-pyruvate transaminase activity, serine-glyoxylate transaminase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: apoplast, peroxisome, plasma membrane, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Aminotransferase class-V pyridoxal-phosphate binding site (InterPro:IPR020578), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); Has 6407 Blast hits to 6405 proteins in 1610 species: Archae - 309; Bacteria - 3905; Metazoa - 186; Fungi - 125; Plants - 148; Viruses - 0; Other Eukaryotes - 1734 (source: NCBI BLink). & (gnl|cdd|38073 : 457.0) no description available & (gnl|cdd|30424 : 355.0) no description available & (p84187|sgat_maize : 100.0) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT) (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) (Fragments) - Zea mays (Maize) & (reliability: 1312.0) & (original description: Putative AGT1, Description = Serine--glyoxylate aminotransferase, PFAM = PF00266)' T '1.2.3' 'PS.photorespiration.aminotransferases peroxisomal' 'niben101scf10162_21719-29222' '(at1g70580 : 882.0) Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro.; alanine-2-oxoglutarate aminotransferase 2 (AOAT2); FUNCTIONS IN: glycine:2-oxoglutarate aminotransferase activity, L-alanine:2-oxoglutarate aminotransferase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: glutamate:glyoxylate aminotransferase (TAIR:AT1G23310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35479 : 711.0) no description available & (p52894|ala2_horvu : 510.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|30785 : 189.0) no description available & (reliability: 1764.0) & (original description: Putative gpt, Description = Probable alanine aminotransferase, mitochondrial, PFAM = PF00155)' T '1.2.4' 'PS.photorespiration.glycine cleavage' '' '' '1.2.4.1' 'PS.photorespiration.glycine cleavage.P subunit' 'nbv0.5scaffold133_924529-932013' '(o49954|gcsp_soltu : 1897.0) Glycine dehydrogenase [decarboxylating], mitochondrial precursor (EC 1.4.4.2) (Glycine decarboxylase) (Glycine cleavage system P-protein) - Solanum tuberosum (Potato) & (at2g26080 : 1755.0) glycine decarboxylase P-protein 2 (GLDP2); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, ATP binding; INVOLVED IN: oxidation reduction, glycine decarboxylation via glycine cleavage system, glycine metabolic process; LOCATED IN: mitochondrion, glycine cleavage complex, chloroplast, chloroplast envelope; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Glycine cleavage system P-protein-like (InterPro:IPR020581), Glycine cleavage system P-protein (InterPro:IPR003437), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Glycine cleavage system P-protein, N-terminal (InterPro:IPR020580); BEST Arabidopsis thaliana protein match is: glycine decarboxylase P-protein 1 (TAIR:AT4G33010.1); Has 12461 Blast hits to 11458 proteins in 1938 species: Archae - 256; Bacteria - 5279; Metazoa - 139; Fungi - 214; Plants - 99; Viruses - 0; Other Eukaryotes - 6474 (source: NCBI BLink). & (gnl|cdd|37251 : 1652.0) no description available & (gnl|cdd|81549 : 1565.0) no description available & (reliability: 3510.0) & (original description: Putative GDCSP, Description = Glycine dehydrogenase (decarboxylating), mitochondrial, PFAM = PF02347;PF02347)' T '1.2.4.1' 'PS.photorespiration.glycine cleavage.P subunit' 'niben044scf00007101ctg007_1-8662' '(o49954|gcsp_soltu : 1903.0) Glycine dehydrogenase [decarboxylating], mitochondrial precursor (EC 1.4.4.2) (Glycine decarboxylase) (Glycine cleavage system P-protein) - Solanum tuberosum (Potato) & (at2g26080 : 1756.0) glycine decarboxylase P-protein 2 (GLDP2); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, ATP binding; INVOLVED IN: oxidation reduction, glycine decarboxylation via glycine cleavage system, glycine metabolic process; LOCATED IN: mitochondrion, glycine cleavage complex, chloroplast, chloroplast envelope; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Glycine cleavage system P-protein-like (InterPro:IPR020581), Glycine cleavage system P-protein (InterPro:IPR003437), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Glycine cleavage system P-protein, N-terminal (InterPro:IPR020580); BEST Arabidopsis thaliana protein match is: glycine decarboxylase P-protein 1 (TAIR:AT4G33010.1); Has 12461 Blast hits to 11458 proteins in 1938 species: Archae - 256; Bacteria - 5279; Metazoa - 139; Fungi - 214; Plants - 99; Viruses - 0; Other Eukaryotes - 6474 (source: NCBI BLink). & (gnl|cdd|37251 : 1660.0) no description available & (gnl|cdd|81549 : 1577.0) no description available & (reliability: 3512.0) & (original description: Putative GDCSP, Description = Glycine dehydrogenase (decarboxylating), mitochondrial, PFAM = PF02347;PF02347)' T '1.2.4.1' 'PS.photorespiration.glycine cleavage.P subunit' 'niben101scf03839_441005-451014' '(o49954|gcsp_soltu : 1943.0) Glycine dehydrogenase [decarboxylating], mitochondrial precursor (EC 1.4.4.2) (Glycine decarboxylase) (Glycine cleavage system P-protein) - Solanum tuberosum (Potato) & (at2g26080 : 1792.0) glycine decarboxylase P-protein 2 (GLDP2); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, ATP binding; INVOLVED IN: oxidation reduction, glycine decarboxylation via glycine cleavage system, glycine metabolic process; LOCATED IN: mitochondrion, glycine cleavage complex, chloroplast, chloroplast envelope; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Glycine cleavage system P-protein-like (InterPro:IPR020581), Glycine cleavage system P-protein (InterPro:IPR003437), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Glycine cleavage system P-protein, N-terminal (InterPro:IPR020580); BEST Arabidopsis thaliana protein match is: glycine decarboxylase P-protein 1 (TAIR:AT4G33010.1); Has 12461 Blast hits to 11458 proteins in 1938 species: Archae - 256; Bacteria - 5279; Metazoa - 139; Fungi - 214; Plants - 99; Viruses - 0; Other Eukaryotes - 6474 (source: NCBI BLink). & (gnl|cdd|37251 : 1685.0) no description available & (gnl|cdd|81549 : 1602.0) no description available & (reliability: 3584.0) & (original description: Putative GDCSP, Description = Glycine dehydrogenase (decarboxylating), mitochondrial, PFAM = PF02347;PF02347)' T '1.2.4.2' 'PS.photorespiration.glycine cleavage.T subunit' 'niben044scf00013023ctg008_22232-26386' '(p54260|gcst_soltu : 819.0) Aminomethyltransferase, mitochondrial precursor (EC 2.1.2.10) (Glycine cleavage system T protein) (GCVT) - Solanum tuberosum (Potato) & (at1g11860 : 740.0) Glycine cleavage T-protein family; FUNCTIONS IN: aminomethyltransferase activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycine cleavage system T protein (InterPro:IPR006223), Glycine cleavage T-protein, N-terminal (InterPro:IPR006222), Glycine cleavage T-protein, C-terminal barrel (InterPro:IPR013977); BEST Arabidopsis thaliana protein match is: Glycine cleavage T-protein family (TAIR:AT1G60990.3). & (gnl|cdd|37981 : 530.0) no description available & (gnl|cdd|30753 : 345.0) no description available & (reliability: 1480.0) & (original description: Putative GDCST, Description = Aminomethyltransferase, mitochondrial, PFAM = PF08669;PF01571)' T '1.2.4.2' 'PS.photorespiration.glycine cleavage.T subunit' 'niben101scf02145_1055454-1060904' '(p54260|gcst_soltu : 825.0) Aminomethyltransferase, mitochondrial precursor (EC 2.1.2.10) (Glycine cleavage system T protein) (GCVT) - Solanum tuberosum (Potato) & (at1g11860 : 743.0) Glycine cleavage T-protein family; FUNCTIONS IN: aminomethyltransferase activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycine cleavage system T protein (InterPro:IPR006223), Glycine cleavage T-protein, N-terminal (InterPro:IPR006222), Glycine cleavage T-protein, C-terminal barrel (InterPro:IPR013977); BEST Arabidopsis thaliana protein match is: Glycine cleavage T-protein family (TAIR:AT1G60990.3). & (gnl|cdd|37981 : 531.0) no description available & (gnl|cdd|30753 : 345.0) no description available & (reliability: 1486.0) & (original description: Putative GDCST, Description = Aminomethyltransferase, mitochondrial, PFAM = PF01571;PF08669)' T '1.2.4.3' 'PS.photorespiration.glycine cleavage.L subunit' '' '' '1.2.4.4' 'PS.photorespiration.glycine cleavage.H protein' 'nbv0.3scaffold81479_1-4032' '(p49359|gcsh_flapr : 253.0) Glycine cleavage system H protein, mitochondrial precursor - Flaveria pringlei & (at1g32470 : 234.0) Single hybrid motif superfamily protein; FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity; INVOLVED IN: glycine catabolic process, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, glycine cleavage complex, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Single hybrid motif (InterPro:IPR011053), Glycine cleavage H-protein (InterPro:IPR002930), Glycine cleavage H-protein, subgroup (InterPro:IPR017453); BEST Arabidopsis thaliana protein match is: glycine decarboxylase complex H (TAIR:AT2G35370.1); Has 7097 Blast hits to 7097 proteins in 2175 species: Archae - 168; Bacteria - 4510; Metazoa - 187; Fungi - 126; Plants - 207; Viruses - 0; Other Eukaryotes - 1899 (source: NCBI BLink). & (gnl|cdd|38583 : 208.0) no description available & (gnl|cdd|85558 : 168.0) no description available & (reliability: 468.0) & (original description: Putative GDCSH, Description = Glycine cleavage system H protein, mitochondrial, PFAM = PF01597)' T '1.2.4.4' 'PS.photorespiration.glycine cleavage.H protein' 'niben044scf00005087ctg027_101-3807' '(p49359|gcsh_flapr : 251.0) Glycine cleavage system H protein, mitochondrial precursor - Flaveria pringlei & (at1g32470 : 233.0) Single hybrid motif superfamily protein; FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity; INVOLVED IN: glycine catabolic process, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, glycine cleavage complex, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Single hybrid motif (InterPro:IPR011053), Glycine cleavage H-protein (InterPro:IPR002930), Glycine cleavage H-protein, subgroup (InterPro:IPR017453); BEST Arabidopsis thaliana protein match is: glycine decarboxylase complex H (TAIR:AT2G35370.1); Has 7097 Blast hits to 7097 proteins in 2175 species: Archae - 168; Bacteria - 4510; Metazoa - 187; Fungi - 126; Plants - 207; Viruses - 0; Other Eukaryotes - 1899 (source: NCBI BLink). & (gnl|cdd|38583 : 206.0) no description available & (gnl|cdd|85558 : 168.0) no description available & (reliability: 466.0) & (original description: Putative GDCSH, Description = Glycine cleavage system H protein, mitochondrial, PFAM = PF01597)' T '1.2.4.4' 'PS.photorespiration.glycine cleavage.H protein' 'niben044scf00016874ctg009_15674-21895' '(at2g35120 : 222.0) Single hybrid motif superfamily protein; FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, ATP binding; INVOLVED IN: glycine catabolic process, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, glycine cleavage complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Single hybrid motif (InterPro:IPR011053), Glycine cleavage H-protein (InterPro:IPR002930), Glycine cleavage H-protein, subgroup (InterPro:IPR017453); BEST Arabidopsis thaliana protein match is: Single hybrid motif superfamily protein (TAIR:AT1G32470.1); Has 7147 Blast hits to 7147 proteins in 2201 species: Archae - 168; Bacteria - 4552; Metazoa - 187; Fungi - 130; Plants - 205; Viruses - 0; Other Eukaryotes - 1905 (source: NCBI BLink). & (p49359|gcsh_flapr : 199.0) Glycine cleavage system H protein, mitochondrial precursor - Flaveria pringlei & (gnl|cdd|38583 : 199.0) no description available & (gnl|cdd|80837 : 165.0) no description available & (reliability: 444.0) & (original description: Putative GDH2, Description = Glycine cleavage system H protein 2, mitochondrial, PFAM = PF01597)' T '1.2.4.4' 'PS.photorespiration.glycine cleavage.H protein' 'niben101scf00526_62827-66628' '(p49359|gcsh_flapr : 256.0) Glycine cleavage system H protein, mitochondrial precursor - Flaveria pringlei & (at1g32470 : 236.0) Single hybrid motif superfamily protein; FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity; INVOLVED IN: glycine catabolic process, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, glycine cleavage complex, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Single hybrid motif (InterPro:IPR011053), Glycine cleavage H-protein (InterPro:IPR002930), Glycine cleavage H-protein, subgroup (InterPro:IPR017453); BEST Arabidopsis thaliana protein match is: glycine decarboxylase complex H (TAIR:AT2G35370.1); Has 7097 Blast hits to 7097 proteins in 2175 species: Archae - 168; Bacteria - 4510; Metazoa - 187; Fungi - 126; Plants - 207; Viruses - 0; Other Eukaryotes - 1899 (source: NCBI BLink). & (gnl|cdd|38583 : 212.0) no description available & (gnl|cdd|85558 : 170.0) no description available & (reliability: 472.0) & (original description: Putative GDCSH, Description = Glycine cleavage system H protein, mitochondrial, PFAM = PF01597)' T '1.2.4.4' 'PS.photorespiration.glycine cleavage.H protein' 'niben101scf01125_123419-128463' '(at2g35120 : 214.0) Single hybrid motif superfamily protein; FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, ATP binding; INVOLVED IN: glycine catabolic process, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, glycine cleavage complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Single hybrid motif (InterPro:IPR011053), Glycine cleavage H-protein (InterPro:IPR002930), Glycine cleavage H-protein, subgroup (InterPro:IPR017453); BEST Arabidopsis thaliana protein match is: Single hybrid motif superfamily protein (TAIR:AT1G32470.1); Has 7147 Blast hits to 7147 proteins in 2201 species: Archae - 168; Bacteria - 4552; Metazoa - 187; Fungi - 130; Plants - 205; Viruses - 0; Other Eukaryotes - 1905 (source: NCBI BLink). & (gnl|cdd|38583 : 192.0) no description available & (p49359|gcsh_flapr : 187.0) Glycine cleavage system H protein, mitochondrial precursor - Flaveria pringlei & (gnl|cdd|80837 : 169.0) no description available & (reliability: 428.0) & (original description: Putative gcvH, Description = Glycine cleavage system H protein, PFAM = PF01597)' T '1.2.4.4' 'PS.photorespiration.glycine cleavage.H protein' 'niben101scf01526_333859-337750' '(p49359|gcsh_flapr : 253.0) Glycine cleavage system H protein, mitochondrial precursor - Flaveria pringlei & (at1g32470 : 238.0) Single hybrid motif superfamily protein; FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity; INVOLVED IN: glycine catabolic process, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, glycine cleavage complex, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Single hybrid motif (InterPro:IPR011053), Glycine cleavage H-protein (InterPro:IPR002930), Glycine cleavage H-protein, subgroup (InterPro:IPR017453); BEST Arabidopsis thaliana protein match is: glycine decarboxylase complex H (TAIR:AT2G35370.1); Has 7097 Blast hits to 7097 proteins in 2175 species: Archae - 168; Bacteria - 4510; Metazoa - 187; Fungi - 126; Plants - 207; Viruses - 0; Other Eukaryotes - 1899 (source: NCBI BLink). & (gnl|cdd|38583 : 213.0) no description available & (gnl|cdd|85558 : 170.0) no description available & (reliability: 476.0) & (original description: Putative GDCSH, Description = Glycine cleavage system H protein, mitochondrial, PFAM = PF01597)' T '1.2.4.4' 'PS.photorespiration.glycine cleavage.H protein' 'niben101scf02156_1555216-1563511' '(at2g35120 : 222.0) Single hybrid motif superfamily protein; FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, ATP binding; INVOLVED IN: glycine catabolic process, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, glycine cleavage complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Single hybrid motif (InterPro:IPR011053), Glycine cleavage H-protein (InterPro:IPR002930), Glycine cleavage H-protein, subgroup (InterPro:IPR017453); BEST Arabidopsis thaliana protein match is: Single hybrid motif superfamily protein (TAIR:AT1G32470.1); Has 7147 Blast hits to 7147 proteins in 2201 species: Archae - 168; Bacteria - 4552; Metazoa - 187; Fungi - 130; Plants - 205; Viruses - 0; Other Eukaryotes - 1905 (source: NCBI BLink). & (p49359|gcsh_flapr : 200.0) Glycine cleavage system H protein, mitochondrial precursor - Flaveria pringlei & (gnl|cdd|38583 : 196.0) no description available & (gnl|cdd|80837 : 164.0) no description available & (reliability: 444.0) & (original description: Putative GDH2, Description = Glycine cleavage system H protein 2, mitochondrial, PFAM = PF01597)' T '1.2.5' 'PS.photorespiration.serine hydroxymethyltransferase' 'niben101scf04539_106467-112667' '(at4g32520 : 830.0) Encodes a serine hydroxymethyltransferase SHMT3 located in the plastid.; serine hydroxymethyltransferase 3 (SHM3); FUNCTIONS IN: glycine hydroxymethyltransferase activity; INVOLVED IN: glycine metabolic process, L-serine metabolic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine transhydroxymethyltransferase 1 (TAIR:AT4G37930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37678 : 776.0) no description available & (gnl|cdd|64334 : 602.0) no description available & (p34899|glym_pea : 565.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Pisum sativum (Garden pea) & (reliability: 1660.0) & (original description: Putative for, Description = Serine hydroxymethyltransferase, PFAM = PF00464)' T '1.2.5' 'PS.photorespiration.serine hydroxymethyltransferase' 'niben101scf07116_93796-99821' '(at4g32520 : 832.0) Encodes a serine hydroxymethyltransferase SHMT3 located in the plastid.; serine hydroxymethyltransferase 3 (SHM3); FUNCTIONS IN: glycine hydroxymethyltransferase activity; INVOLVED IN: glycine metabolic process, L-serine metabolic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine transhydroxymethyltransferase 1 (TAIR:AT4G37930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37678 : 781.0) no description available & (gnl|cdd|64334 : 604.0) no description available & (p50433|glym_soltu : 570.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Solanum tuberosum (Potato) & (reliability: 1664.0) & (original description: Putative SHM3, Description = Serine hydroxymethyltransferase 3, chloroplastic, PFAM = PF00464)' T '1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'nbv0.3scaffold55838_1699-4786' '(at2g45630 : 296.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: NAD or NADH binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, binding, catalytic activity, cofactor binding; INVOLVED IN: metabolic process; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|31252 : 247.0) no description available & (gnl|cdd|35292 : 241.0) no description available & (p13443|dhgy_cucsa : 94.0) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 592.0) & (original description: Putative HPR3, Description = Glyoxylate/hydroxypyruvate reductase HPR3, PFAM = PF00389;PF02826)' T '1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'nbv0.5scaffold5168_51616-63703' '(at1g79870 : 404.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1). & (gnl|cdd|35292 : 307.0) no description available & (gnl|cdd|31252 : 289.0) no description available & (p13443|dhgy_cucsa : 98.2) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 808.0) & (original description: Putative HPPR, Description = Hydroxyphenylpyruvate reductase, PFAM = PF00389;PF00389;PF02826)' T '1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'niben044scf00024878ctg003_91-5434' '(at1g79870 : 351.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1). & (gnl|cdd|31252 : 229.0) no description available & (gnl|cdd|35292 : 218.0) no description available & (reliability: 702.0) & (original description: Putative ghrB, Description = D-isomer specific 2-hydroxyacid dehydrogenase, PFAM = PF02826;PF00389)' T '1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'niben044scf00034734ctg004_3105-6162' '(at1g12550 : 325.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT2G45630.2); Has 29393 Blast hits to 29385 proteins in 2729 species: Archae - 468; Bacteria - 18116; Metazoa - 729; Fungi - 1168; Plants - 597; Viruses - 5; Other Eukaryotes - 8310 (source: NCBI BLink). & (gnl|cdd|35292 : 262.0) no description available & (gnl|cdd|31252 : 247.0) no description available & (q07511|fdh_soltu : 90.5) Formate dehydrogenase, mitochondrial precursor (EC 1.2.1.2) (NAD-dependent formate dehydrogenase) (FDH) - Solanum tuberosum (Potato) & (reliability: 650.0) & (original description: Putative HPR3, Description = Glyoxylate/hydroxypyruvate reductase HPR3, PFAM = PF00389;PF02826)' T '1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'niben044scf00041863ctg001_1-4336' '(at1g79870 : 456.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1). & (gnl|cdd|35292 : 311.0) no description available & (gnl|cdd|31252 : 296.0) no description available & (p13443|dhgy_cucsa : 95.5) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 912.0) & (original description: Putative HPPR, Description = Hydroxyphenylpyruvate reductase, PFAM = PF00389;PF02826)' T '1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'niben101scf00490_137418-140747' '(at1g12550 : 328.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT2G45630.2); Has 29393 Blast hits to 29385 proteins in 2729 species: Archae - 468; Bacteria - 18116; Metazoa - 729; Fungi - 1168; Plants - 597; Viruses - 5; Other Eukaryotes - 8310 (source: NCBI BLink). & (gnl|cdd|35292 : 268.0) no description available & (gnl|cdd|31252 : 254.0) no description available & (q9sxp2|fdh1_orysa : 94.4) Formate dehydrogenase 1, mitochondrial precursor (EC 1.2.1.2) (NAD-dependent formate dehydrogenase 1) (FDH 1) - Oryza sativa (Rice) & (reliability: 656.0) & (original description: Putative HPR3, Description = Glyoxylate/hydroxypyruvate reductase HPR3, PFAM = PF02826;PF00389)' T '1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'niben101scf01374_131119-135283' '(at1g79870 : 461.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1). & (gnl|cdd|35292 : 317.0) no description available & (gnl|cdd|31252 : 299.0) no description available & (p13443|dhgy_cucsa : 97.4) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 922.0) & (original description: Putative HPPR, Description = Hydroxyphenylpyruvate reductase, PFAM = PF02826;PF00389)' T '1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'niben101scf01718_101438-107286' '(at1g68010 : 669.0) Encodes hydroxypyruvate reductase.; hydroxypyruvate reductase (HPR); CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT3G19480.1). & (p13443|dhgy_cucsa : 660.0) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (gnl|cdd|35292 : 288.0) no description available & (gnl|cdd|84741 : 249.0) no description available & (reliability: 1338.0) & (original description: Putative HPR, Description = Glycerate dehydrogenase HPR, peroxisomal, PFAM = PF00389;PF02826;PF02826)' T '1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'niben101scf03287_57140-73598' '(at1g79870 : 391.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1). & (gnl|cdd|35292 : 298.0) no description available & (gnl|cdd|31252 : 285.0) no description available & (p13443|dhgy_cucsa : 92.8) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 782.0) & (original description: Putative HPPR, Description = Hydroxyphenylpyruvate reductase, PFAM = PF02826;PF00389)' T '1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'niben101scf04494_95866-104203' '(at1g79870 : 377.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1). & (gnl|cdd|35292 : 284.0) no description available & (gnl|cdd|31252 : 276.0) no description available & (p13443|dhgy_cucsa : 102.0) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 754.0) & (original description: Putative HPR3, Description = Glyoxylate/hydroxypyruvate reductase HPR3, PFAM = PF02826;PF00389)' T '1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'niben101scf04494_103474-110165' '(at1g79870 : 399.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1). & (gnl|cdd|35292 : 300.0) no description available & (gnl|cdd|31252 : 284.0) no description available & (p13443|dhgy_cucsa : 95.1) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 798.0) & (original description: Putative ghrB, Description = Hydroxyacid dehydrogenase, PFAM = PF02826;PF00389;PF00389)' T '1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'niben101scf05709_121365-146222' '(at1g79870 : 423.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1). & (gnl|cdd|35292 : 284.0) no description available & (gnl|cdd|31252 : 284.0) no description available & (p13443|dhgy_cucsa : 92.0) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 846.0) & (original description: Putative HPPR, Description = Hydroxyphenylpyruvate reductase, PFAM = PF00389;PF02826)' T '1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'niben101scf06024_40842-45429' '(at2g45630 : 355.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: NAD or NADH binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, binding, catalytic activity, cofactor binding; INVOLVED IN: metabolic process; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35292 : 289.0) no description available & (gnl|cdd|31252 : 262.0) no description available & (q67u69|fdh2_orysa : 80.5) Formate dehydrogenase 2, mitochondrial precursor (EC 1.2.1.2) (NAD-dependent formate dehydrogenase 2) (FDH 2) - Oryza sativa (Rice) & (reliability: 710.0) & (original description: Putative HPR3, Description = Glyoxylate/hydroxypyruvate reductase HPR3, PFAM = PF02826;PF00389)' T '1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'niben101scf06024_61073-67261' '(at2g45630 : 372.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: NAD or NADH binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, binding, catalytic activity, cofactor binding; INVOLVED IN: metabolic process; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35292 : 282.0) no description available & (gnl|cdd|31252 : 254.0) no description available & (q67u69|fdh2_orysa : 104.0) Formate dehydrogenase 2, mitochondrial precursor (EC 1.2.1.2) (NAD-dependent formate dehydrogenase 2) (FDH 2) - Oryza sativa (Rice) & (reliability: 744.0) & (original description: Putative Sb06g000620, Description = Putative uncharacterized protein Sb06g000620, PFAM = PF00389;PF02826)' T '1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'niben101scf06809_165015-177590' '(at1g68010 : 683.0) Encodes hydroxypyruvate reductase.; hydroxypyruvate reductase (HPR); CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT3G19480.1). & (p13443|dhgy_cucsa : 675.0) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (gnl|cdd|35292 : 291.0) no description available & (gnl|cdd|84741 : 254.0) no description available & (reliability: 1366.0) & (original description: Putative HPR, Description = Glycerate dehydrogenase HPR, peroxisomal, PFAM = PF00389;PF02826)' T '1.2.7' 'PS.photorespiration.glycerate kinase' 'niben101scf02572_356106-361205' '(at1g80380 : 560.0) encodes a glycerate kinase which catalyzes the last step of photorespiration C2 cycle.; P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: glycerate kinase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (gnl|cdd|38089 : 356.0) no description available & (gnl|cdd|33963 : 182.0) no description available & (reliability: 1120.0) & (original description: Putative GLYK, Description = D-glycerate 3-kinase, chloroplastic, PFAM = )' T '1.2.7' 'PS.photorespiration.glycerate kinase' 'niben101scf18107_45768-51109' '(at1g80380 : 553.0) encodes a glycerate kinase which catalyzes the last step of photorespiration C2 cycle.; P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: glycerate kinase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (gnl|cdd|38089 : 353.0) no description available & (gnl|cdd|33963 : 178.0) no description available & (reliability: 1106.0) & (original description: Putative GLYK, Description = D-glycerate 3-kinase, chloroplastic-like protein, PFAM = )' T '1.2.1001' 'PS.photorespiration.glycerate' 'glycerate' 'PS.photorepiration; lipid metabolism; amino acid degradation.serine; amino acid degradation.glycine; gluconeogenese/ glyoxylate cycle; TCA / org transformation' M '1.2.1002' 'PS.photorepiration.glycolate' 'glycolate' 'PS.photorepiration' M '1.2.1003' 'PS.photorepiration.glycine' 'glycine' 'PS.photorepiration; amino acid synthesis.serine; amino acid synthesis.glycine; amino acid degradation.glycine; redox regulation; nucleotide metabolism.synthesis; C1-metabolism' M '1.2.1004' 'PS.photorepiration.serine' 'serine' 'PS.photorepiration; lipid metabolism; amino acid degradation.homoserine; amino acid synthesis.serine; amino acid degradation.serine; amino acid degradation.methionine; S-assimilation' M '1.2.1005' 'PS.photorepiration.glyoxylate' 'glyoxylate' 'PS.photorepiration' M '1.2.1006' 'PS.photorepiration.hydroxypyruvate' 'hydroxypyruvate' 'PS.photorepiration' M '1.3' 'PS.calvin cycle' 'niben044scf00039233ctg001_1867-4262' '(at3g62410 : 115.0) CP12-2 encodes a small peptide found in the chloroplast stroma. It belongs to the CP12 gene family thought to be involved in the formation of a supramolecular complex with glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and phosphoribulokinase (PRK) embedded in the Calvin cycle. CP12-2 is coordinately regulated by light with the photosynthetic GAPDH and PRK. The annotation of this gene is based on article 32494.; CP12 domain-containing protein 2 (CP12-2); FUNCTIONS IN: protein binding; INVOLVED IN: negative regulation of reductive pentose-phosphate cycle, response to light stimulus, reductive pentose-phosphate cycle, peptide cross-linking via L-cystine, response to sucrose stimulus; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function CP12 (InterPro:IPR003823); BEST Arabidopsis thaliana protein match is: CP12 domain-containing protein 1 (TAIR:AT2G47400.1); Has 244 Blast hits to 244 proteins in 69 species: Archae - 0; Bacteria - 125; Metazoa - 0; Fungi - 0; Plants - 111; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|66366 : 92.1) no description available & (reliability: 230.0) & (original description: Putative cp12, Description = CP12 domain-containing protein 1, PFAM = PF02672)' T '1.3' 'PS.calvin cycle' 'niben101scf04819_415131-417526' '(gnl|cdd|66366 : 91.0) no description available & (at3g62410 : 89.7) CP12-2 encodes a small peptide found in the chloroplast stroma. It belongs to the CP12 gene family thought to be involved in the formation of a supramolecular complex with glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and phosphoribulokinase (PRK) embedded in the Calvin cycle. CP12-2 is coordinately regulated by light with the photosynthetic GAPDH and PRK. The annotation of this gene is based on article 32494.; CP12 domain-containing protein 2 (CP12-2); FUNCTIONS IN: protein binding; INVOLVED IN: negative regulation of reductive pentose-phosphate cycle, response to light stimulus, reductive pentose-phosphate cycle, peptide cross-linking via L-cystine, response to sucrose stimulus; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function CP12 (InterPro:IPR003823); BEST Arabidopsis thaliana protein match is: CP12 domain-containing protein 1 (TAIR:AT2G47400.1); Has 244 Blast hits to 244 proteins in 69 species: Archae - 0; Bacteria - 125; Metazoa - 0; Fungi - 0; Plants - 111; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative cp12, Description = CP12 domain-containing protein 1, PFAM = PF02672)' T '1.3' 'PS.calvin cycle' 'niben101scf08918_22140-24529' '(at3g62410 : 117.0) CP12-2 encodes a small peptide found in the chloroplast stroma. It belongs to the CP12 gene family thought to be involved in the formation of a supramolecular complex with glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and phosphoribulokinase (PRK) embedded in the Calvin cycle. CP12-2 is coordinately regulated by light with the photosynthetic GAPDH and PRK. The annotation of this gene is based on article 32494.; CP12 domain-containing protein 2 (CP12-2); FUNCTIONS IN: protein binding; INVOLVED IN: negative regulation of reductive pentose-phosphate cycle, response to light stimulus, reductive pentose-phosphate cycle, peptide cross-linking via L-cystine, response to sucrose stimulus; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function CP12 (InterPro:IPR003823); BEST Arabidopsis thaliana protein match is: CP12 domain-containing protein 1 (TAIR:AT2G47400.1); Has 244 Blast hits to 244 proteins in 69 species: Archae - 0; Bacteria - 125; Metazoa - 0; Fungi - 0; Plants - 111; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|66366 : 85.2) no description available & (reliability: 234.0) & (original description: Putative cp12, Description = CP12 domain-containing protein 1, PFAM = PF02672)' T '1.3' 'PS.calvin cycle' 'niben101scf16582_23225-25602' '(at3g62410 : 101.0) CP12-2 encodes a small peptide found in the chloroplast stroma. It belongs to the CP12 gene family thought to be involved in the formation of a supramolecular complex with glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and phosphoribulokinase (PRK) embedded in the Calvin cycle. CP12-2 is coordinately regulated by light with the photosynthetic GAPDH and PRK. The annotation of this gene is based on article 32494.; CP12 domain-containing protein 2 (CP12-2); FUNCTIONS IN: protein binding; INVOLVED IN: negative regulation of reductive pentose-phosphate cycle, response to light stimulus, reductive pentose-phosphate cycle, peptide cross-linking via L-cystine, response to sucrose stimulus; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function CP12 (InterPro:IPR003823); BEST Arabidopsis thaliana protein match is: CP12 domain-containing protein 1 (TAIR:AT2G47400.1); Has 244 Blast hits to 244 proteins in 69 species: Archae - 0; Bacteria - 125; Metazoa - 0; Fungi - 0; Plants - 111; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|66366 : 84.8) no description available & (reliability: 202.0) & (original description: Putative cp12, Description = CP12 domain-containing protein 1, PFAM = PF02672)' T '1.3.1' 'PS.calvin cycle.rubisco large subunit' 'nbv0.3scaffold30914_16121-18987' '(gnl|cdd|79258 : 559.0) no description available & (q8ru60|rbl_atrbe : 535.0) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) - Atropa belladonna (Belladonna) (Deadly nightshade) & (atcg00490 : 511.0) large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RBCL; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: response to cadmium ion, carbon fixation, peptidyl-cysteine S-nitrosylation, response to abscisic acid stimulus; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, large subunit, C-terminal (InterPro:IPR000685), Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal (InterPro:IPR017443), Ribulose bisphosphate carboxylase, large subunit, N-terminal (InterPro:IPR017444), Ribulose bisphosphate carboxylase, large chain, active site (InterPro:IPR020878); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase large chain, catalytic domain (TAIR:AT2G07732.1). & (reliability: 1022.0) & (original description: Putative cbbL, Description = Ribulose bisphosphate carboxylase large chain, PFAM = PF00016;PF02788)' T '1.3.1' 'PS.calvin cycle.rubisco large subunit' 'nbv0.3scaffold105889_1738-3365' '(gnl|cdd|79258 : 251.0) no description available & (p00876|rbl_tobac : 217.0) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) - Nicotiana tabacum (Common tobacco) & (atcg00490 : 198.0) large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RBCL; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: response to cadmium ion, carbon fixation, peptidyl-cysteine S-nitrosylation, response to abscisic acid stimulus; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, large subunit, C-terminal (InterPro:IPR000685), Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal (InterPro:IPR017443), Ribulose bisphosphate carboxylase, large subunit, N-terminal (InterPro:IPR017444), Ribulose bisphosphate carboxylase, large chain, active site (InterPro:IPR020878); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase large chain, catalytic domain (TAIR:AT2G07732.1). & (reliability: 396.0) & (original description: Putative rbcL, Description = Ribulose bisphosphate carboxylase large chain, PFAM = PF02788)' T '1.3.1' 'PS.calvin cycle.rubisco large subunit' 'nbv0.5scaffold1343_52537-55967' '(gnl|cdd|79258 : 979.0) no description available & (p00876|rbl_tobac : 971.0) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) - Nicotiana tabacum (Common tobacco) & (atcg00490 : 919.0) large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RBCL; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: response to cadmium ion, carbon fixation, peptidyl-cysteine S-nitrosylation, response to abscisic acid stimulus; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, large subunit, C-terminal (InterPro:IPR000685), Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal (InterPro:IPR017443), Ribulose bisphosphate carboxylase, large subunit, N-terminal (InterPro:IPR017444), Ribulose bisphosphate carboxylase, large chain, active site (InterPro:IPR020878); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase large chain, catalytic domain (TAIR:AT2G07732.1). & (reliability: 1838.0) & (original description: Putative rbcL, Description = Ribulose bisphosphate carboxylase large chain, PFAM = PF00016;PF02788)' T '1.3.1' 'PS.calvin cycle.rubisco large subunit' 'nbv0.5scaffold1353_422214-425646' '(gnl|cdd|79258 : 409.0) no description available & (p00876|rbl_tobac : 378.0) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) - Nicotiana tabacum (Common tobacco) & (atcg00490 : 357.0) large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RBCL; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: response to cadmium ion, carbon fixation, peptidyl-cysteine S-nitrosylation, response to abscisic acid stimulus; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, large subunit, C-terminal (InterPro:IPR000685), Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal (InterPro:IPR017443), Ribulose bisphosphate carboxylase, large subunit, N-terminal (InterPro:IPR017444), Ribulose bisphosphate carboxylase, large chain, active site (InterPro:IPR020878); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase large chain, catalytic domain (TAIR:AT2G07732.1). & (reliability: 714.0) & (original description: Putative rbcL, Description = Ribulose bisphosphate carboxylase large chain, PFAM = PF00016;PF00016;PF02788)' T '1.3.1' 'PS.calvin cycle.rubisco large subunit' 'niben044scf00003163ctg005_13786-15132' '(o62964|rbl_vigun : 164.0) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) - Vigna unguiculata (Cowpea) & (gnl|cdd|79258 : 161.0) no description available & (atcg00490 : 160.0) large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RBCL; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: response to cadmium ion, carbon fixation, peptidyl-cysteine S-nitrosylation, response to abscisic acid stimulus; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, large subunit, C-terminal (InterPro:IPR000685), Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal (InterPro:IPR017443), Ribulose bisphosphate carboxylase, large subunit, N-terminal (InterPro:IPR017444), Ribulose bisphosphate carboxylase, large chain, active site (InterPro:IPR020878); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase large chain, catalytic domain (TAIR:AT2G07732.1). & (reliability: 320.0) & (original description: Putative cbbL, Description = Ribulose bisphosphate carboxylase large chain, PFAM = PF00016)' T '1.3.1' 'PS.calvin cycle.rubisco large subunit' 'niben044scf00059984ctg000_9322-11933' '(gnl|cdd|79258 : 302.0) no description available & (p00876|rbl_tobac : 299.0) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) - Nicotiana tabacum (Common tobacco) & (atcg00490 : 295.0) large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RBCL; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: response to cadmium ion, carbon fixation, peptidyl-cysteine S-nitrosylation, response to abscisic acid stimulus; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, large subunit, C-terminal (InterPro:IPR000685), Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal (InterPro:IPR017443), Ribulose bisphosphate carboxylase, large subunit, N-terminal (InterPro:IPR017444), Ribulose bisphosphate carboxylase, large chain, active site (InterPro:IPR020878); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase large chain, catalytic domain (TAIR:AT2G07732.1). & (reliability: 590.0) & (original description: Putative rbcL, Description = Ribulose bisphosphate carboxylase large chain, PFAM = PF02788;PF00016)' T '1.3.1' 'PS.calvin cycle.rubisco large subunit' 'niben101scf00173_978477-981108' '(gnl|cdd|79258 : 576.0) no description available & (p00876|rbl_tobac : 549.0) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) - Nicotiana tabacum (Common tobacco) & (atcg00490 : 525.0) large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RBCL; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: response to cadmium ion, carbon fixation, peptidyl-cysteine S-nitrosylation, response to abscisic acid stimulus; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, large subunit, C-terminal (InterPro:IPR000685), Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal (InterPro:IPR017443), Ribulose bisphosphate carboxylase, large subunit, N-terminal (InterPro:IPR017444), Ribulose bisphosphate carboxylase, large chain, active site (InterPro:IPR020878); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase large chain, catalytic domain (TAIR:AT2G07732.1). & (reliability: 1050.0) & (original description: Putative rbcl, Description = Ribulose bisphosphate carboxylase large chain, PFAM = PF00016;PF02788)' T '1.3.1' 'PS.calvin cycle.rubisco large subunit' 'niben101scf00568_524204-527593' '(gnl|cdd|79258 : 391.0) no description available & (p00876|rbl_tobac : 347.0) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) - Nicotiana tabacum (Common tobacco) & (atcg00490 : 327.0) large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RBCL; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: response to cadmium ion, carbon fixation, peptidyl-cysteine S-nitrosylation, response to abscisic acid stimulus; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, large subunit, C-terminal (InterPro:IPR000685), Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal (InterPro:IPR017443), Ribulose bisphosphate carboxylase, large subunit, N-terminal (InterPro:IPR017444), Ribulose bisphosphate carboxylase, large chain, active site (InterPro:IPR020878); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase large chain, catalytic domain (TAIR:AT2G07732.1). & (reliability: 654.0) & (original description: Putative rbcL, Description = Ribulose bisphosphate carboxylase large chain, PFAM = PF00016;PF00016;PF02788)' T '1.3.1' 'PS.calvin cycle.rubisco large subunit' 'niben101scf25930_26847-31089' '(gnl|cdd|79258 : 171.0) no description available & (p25079|rbl_soltu : 141.0) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) - Solanum tuberosum (Potato) & (atcg00490 : 125.0) large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RBCL; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: response to cadmium ion, carbon fixation, peptidyl-cysteine S-nitrosylation, response to abscisic acid stimulus; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, large subunit, C-terminal (InterPro:IPR000685), Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal (InterPro:IPR017443), Ribulose bisphosphate carboxylase, large subunit, N-terminal (InterPro:IPR017444), Ribulose bisphosphate carboxylase, large chain, active site (InterPro:IPR020878); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase large chain, catalytic domain (TAIR:AT2G07732.1). & (reliability: 250.0) & (original description: Putative rbcL, Description = Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, PFAM = PF02788)' T '1.3.2' 'PS.calvin cycle.rubisco small subunit' 'nbv0.3scaffold35646_18458-21312' '(p26573|rbs8_nicpl : 322.0) Ribulose bisphosphate carboxylase small chain 8B, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 8B) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g38410 : 265.0) Ribulose bisphosphate carboxylase (small chain) family protein; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: carbon fixation, response to blue light, response to red light, response to far red light; LOCATED IN: thylakoid, chloroplast ribulose bisphosphate carboxylase complex, apoplast, chloroplast, membrane; EXPRESSED IN: 12 plant structures; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|58643 : 159.0) no description available & (reliability: 530.0) & (original description: Putative rbcS, Description = Ribulose bisphosphate carboxylase small chain, PFAM = PF12338;PF00101)' T '1.3.2' 'PS.calvin cycle.rubisco small subunit' 'nbv0.3scaffold37187_9122-19927' '(p10053|rbs_pinth : 193.0) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) - Pinus thunbergii (Green pine) (Japanese black pine) & (at1g67090 : 188.0) ribulose bisphosphate carboxylase small chain 1A (RBCS1A); FUNCTIONS IN: ribulose-bisphosphate carboxylase activity, copper ion binding; INVOLVED IN: carbon fixation, response to cold, response to blue light, response to red light, response to far red light; LOCATED IN: in 7 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58643 : 162.0) no description available & (reliability: 376.0) & (original description: Putative RBCS, Description = Ribulose bisphosphate carboxylase small chain, chloroplastic, PFAM = PF00101)' T '1.3.2' 'PS.calvin cycle.rubisco small subunit' 'nbv0.3scaffold52809_6070-8914' '(p22433|rbs2_nicsy : 332.0) Ribulose bisphosphate carboxylase small chain S41, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit S41) - Nicotiana sylvestris (Wood tobacco) & (at5g38410 : 274.0) Ribulose bisphosphate carboxylase (small chain) family protein; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: carbon fixation, response to blue light, response to red light, response to far red light; LOCATED IN: thylakoid, chloroplast ribulose bisphosphate carboxylase complex, apoplast, chloroplast, membrane; EXPRESSED IN: 12 plant structures; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|58643 : 159.0) no description available & (reliability: 548.0) & (original description: Putative rbcS, Description = Ribulose bisphosphate carboxylase small chain, PFAM = PF12338;PF00101)' T '1.3.2' 'PS.calvin cycle.rubisco small subunit' 'nbv0.5scaffold506_734596-805634' '(p26573|rbs8_nicpl : 316.0) Ribulose bisphosphate carboxylase small chain 8B, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 8B) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g38410 : 259.0) Ribulose bisphosphate carboxylase (small chain) family protein; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: carbon fixation, response to blue light, response to red light, response to far red light; LOCATED IN: thylakoid, chloroplast ribulose bisphosphate carboxylase complex, apoplast, chloroplast, membrane; EXPRESSED IN: 12 plant structures; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|58643 : 159.0) no description available & (reliability: 518.0) & (original description: Putative rbcS, Description = Ribulose bisphosphate carboxylase small chain, PFAM = PF00101;PF12338)' T '1.3.2' 'PS.calvin cycle.rubisco small subunit' 'niben101scf01831_23298-36401' '(q40250|rbs_lacsa : 190.0) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) - Lactuca sativa (Garden lettuce) & (at1g67090 : 186.0) ribulose bisphosphate carboxylase small chain 1A (RBCS1A); FUNCTIONS IN: ribulose-bisphosphate carboxylase activity, copper ion binding; INVOLVED IN: carbon fixation, response to cold, response to blue light, response to red light, response to far red light; LOCATED IN: in 7 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58643 : 161.0) no description available & (reliability: 372.0) & (original description: Putative RBCS, Description = Ribulose bisphosphate carboxylase small chain, chloroplastic, PFAM = PF00101)' T '1.3.2' 'PS.calvin cycle.rubisco small subunit' 'niben101scf01991_428250-515955' '(p26573|rbs8_nicpl : 319.0) Ribulose bisphosphate carboxylase small chain 8B, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 8B) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g38410 : 263.0) Ribulose bisphosphate carboxylase (small chain) family protein; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: carbon fixation, response to blue light, response to red light, response to far red light; LOCATED IN: thylakoid, chloroplast ribulose bisphosphate carboxylase complex, apoplast, chloroplast, membrane; EXPRESSED IN: 12 plant structures; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|58643 : 160.0) no description available & (reliability: 526.0) & (original description: Putative rbcS, Description = Ribulose bisphosphate carboxylase small chain, PFAM = PF00101;PF12338)' T '1.3.2' 'PS.calvin cycle.rubisco small subunit' 'niben101scf03015_590471-593294' '(p26573|rbs8_nicpl : 335.0) Ribulose bisphosphate carboxylase small chain 8B, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 8B) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g38410 : 270.0) Ribulose bisphosphate carboxylase (small chain) family protein; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: carbon fixation, response to blue light, response to red light, response to far red light; LOCATED IN: thylakoid, chloroplast ribulose bisphosphate carboxylase complex, apoplast, chloroplast, membrane; EXPRESSED IN: 12 plant structures; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|58643 : 156.0) no description available & (reliability: 540.0) & (original description: Putative rbcS, Description = Ribulose bisphosphate carboxylase small chain, PFAM = PF00101;PF12338)' T '1.3.2' 'PS.calvin cycle.rubisco small subunit' 'niben101scf04196_58405-60860' '(p26573|rbs8_nicpl : 343.0) Ribulose bisphosphate carboxylase small chain 8B, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 8B) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g38410 : 275.0) Ribulose bisphosphate carboxylase (small chain) family protein; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: carbon fixation, response to blue light, response to red light, response to far red light; LOCATED IN: thylakoid, chloroplast ribulose bisphosphate carboxylase complex, apoplast, chloroplast, membrane; EXPRESSED IN: 12 plant structures; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|58643 : 159.0) no description available & (reliability: 550.0) & (original description: Putative rbcS, Description = Ribulose bisphosphate carboxylase small chain, PFAM = PF12338;PF00101)' T '1.3.2' 'PS.calvin cycle.rubisco small subunit' 'niben101scf04196_83421-86404' '(p69249|rbs_tobac : 343.0) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) (TSSU3-8) - Nicotiana tabacum (Common tobacco) & (at5g38410 : 279.0) Ribulose bisphosphate carboxylase (small chain) family protein; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: carbon fixation, response to blue light, response to red light, response to far red light; LOCATED IN: thylakoid, chloroplast ribulose bisphosphate carboxylase complex, apoplast, chloroplast, membrane; EXPRESSED IN: 12 plant structures; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|58643 : 159.0) no description available & (reliability: 558.0) & (original description: Putative rbcS, Description = Ribulose bisphosphate carboxylase small chain, PFAM = PF00101;PF12338)' T '1.3.3' 'PS.calvin cycle.phosphoglycerate kinase' 'nbv0.3scaffold84109_1-4617' '(q42961|pgkh_tobac : 851.0) Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) - Nicotiana tabacum (Common tobacco) & (at1g56190 : 711.0) Phosphoglycerate kinase family protein; FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: glycolysis; LOCATED IN: thylakoid, mitochondrion, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901), Phosphoglycerate kinase, conserved site (InterPro:IPR015911); BEST Arabidopsis thaliana protein match is: phosphoglycerate kinase 1 (TAIR:AT3G12780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80491 : 581.0) no description available & (gnl|cdd|36581 : 544.0) no description available & (reliability: 1422.0) & (original description: Putative pgk, Description = Phosphoglycerate kinase, PFAM = PF00162)' T '1.3.3' 'PS.calvin cycle.phosphoglycerate kinase' 'niben101scf02139_377272-387984' '(gnl|cdd|80491 : 186.0) no description available & (p12783|pgky_wheat : 172.0) Phosphoglycerate kinase, cytosolic (EC 2.7.2.3) - Triticum aestivum (Wheat) & (at3g12780 : 164.0) nuclear phosphoglycerate kinase (PGK1); phosphoglycerate kinase 1 (PGK1); FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: response to cadmium ion, response to cold, glycolysis, peptidyl-cysteine S-nitrosylation; LOCATED IN: in 11 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901), Phosphoglycerate kinase, conserved site (InterPro:IPR015911); BEST Arabidopsis thaliana protein match is: Phosphoglycerate kinase family protein (TAIR:AT1G56190.1); Has 10843 Blast hits to 10817 proteins in 3010 species: Archae - 254; Bacteria - 5217; Metazoa - 451; Fungi - 193; Plants - 515; Viruses - 0; Other Eukaryotes - 4213 (source: NCBI BLink). & (gnl|cdd|36581 : 151.0) no description available & (reliability: 328.0) & (original description: Putative PGSC0003DMG400003882, Description = Phosphoglycerate kinase, PFAM = PF00162;PF02390)' T '1.3.3' 'PS.calvin cycle.phosphoglycerate kinase' 'niben101scf02461_6816-12166' '(q42962|pgky_tobac : 728.0) Phosphoglycerate kinase, cytosolic (EC 2.7.2.3) - Nicotiana tabacum (Common tobacco) & (at1g79550 : 664.0) Encodes cytosolic phosphoglycerate kinase (PGK).; phosphoglycerate kinase (PGK); FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: glycolysis; LOCATED IN: cytosol, apoplast, plasma membrane, nucleus, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901); BEST Arabidopsis thaliana protein match is: Phosphoglycerate kinase family protein (TAIR:AT1G56190.1); Has 10844 Blast hits to 10818 proteins in 3011 species: Archae - 254; Bacteria - 5218; Metazoa - 451; Fungi - 193; Plants - 517; Viruses - 0; Other Eukaryotes - 4211 (source: NCBI BLink). & (gnl|cdd|80491 : 585.0) no description available & (gnl|cdd|36581 : 530.0) no description available & (reliability: 1268.0) & (original description: Putative pgk, Description = Phosphoglycerate kinase, PFAM = PF00162)' T '1.3.3' 'PS.calvin cycle.phosphoglycerate kinase' 'niben101scf02461_21557-26261' '(q42961|pgkh_tobac : 853.0) Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) - Nicotiana tabacum (Common tobacco) & (at1g56190 : 708.0) Phosphoglycerate kinase family protein; FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: glycolysis; LOCATED IN: thylakoid, mitochondrion, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901), Phosphoglycerate kinase, conserved site (InterPro:IPR015911); BEST Arabidopsis thaliana protein match is: phosphoglycerate kinase 1 (TAIR:AT3G12780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80491 : 582.0) no description available & (gnl|cdd|36581 : 545.0) no description available & (reliability: 1416.0) & (original description: Putative pgk, Description = Phosphoglycerate kinase, PFAM = PF00162)' T '1.3.3' 'PS.calvin cycle.phosphoglycerate kinase' 'niben101scf03856_11161-16555' '(q42962|pgky_tobac : 705.0) Phosphoglycerate kinase, cytosolic (EC 2.7.2.3) - Nicotiana tabacum (Common tobacco) & (at1g79550 : 655.0) Encodes cytosolic phosphoglycerate kinase (PGK).; phosphoglycerate kinase (PGK); FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: glycolysis; LOCATED IN: cytosol, apoplast, plasma membrane, nucleus, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901); BEST Arabidopsis thaliana protein match is: Phosphoglycerate kinase family protein (TAIR:AT1G56190.1); Has 10844 Blast hits to 10818 proteins in 3011 species: Archae - 254; Bacteria - 5218; Metazoa - 451; Fungi - 193; Plants - 517; Viruses - 0; Other Eukaryotes - 4211 (source: NCBI BLink). & (gnl|cdd|80491 : 588.0) no description available & (gnl|cdd|36581 : 535.0) no description available & (reliability: 1278.0) & (original description: Putative pgk, Description = Phosphoglycerate kinase, PFAM = PF00162)' T '1.3.3' 'PS.calvin cycle.phosphoglycerate kinase' 'niben101scf05295_574572-580226' '(q42962|pgky_tobac : 706.0) Phosphoglycerate kinase, cytosolic (EC 2.7.2.3) - Nicotiana tabacum (Common tobacco) & (at1g79550 : 661.0) Encodes cytosolic phosphoglycerate kinase (PGK).; phosphoglycerate kinase (PGK); FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: glycolysis; LOCATED IN: cytosol, apoplast, plasma membrane, nucleus, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901); BEST Arabidopsis thaliana protein match is: Phosphoglycerate kinase family protein (TAIR:AT1G56190.1); Has 10844 Blast hits to 10818 proteins in 3011 species: Archae - 254; Bacteria - 5218; Metazoa - 451; Fungi - 193; Plants - 517; Viruses - 0; Other Eukaryotes - 4211 (source: NCBI BLink). & (gnl|cdd|80491 : 589.0) no description available & (gnl|cdd|36581 : 540.0) no description available & (reliability: 1296.0) & (original description: Putative pgk, Description = Phosphoglycerate kinase, PFAM = PF00162)' T '1.3.4' 'PS.calvin cycle.GAP' 'nbv0.5scaffold9390_7631-16882' '(p12859|g3pb_pea : 717.0) Glyceraldehyde-3-phosphate dehydrogenase B, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit B) - Pisum sativum (Garden pea) & (at1g42970 : 690.0) Encodes chloroplast localized glyceraldehyde-3-phosphate dehydrogenase that can use both NADH and NADPH to reduce 1,3-diphosphate glycerate. It forms A2B2 heterotetramers with GapA forms of the GADPH enzyme. These complexes are active in the light under reducing conditions, but show reduced NADPH-dependent activity in response to oxidized thioredoxins and increased NAD(H)/NADP(H) ratios due to the formation of inactive A8B8 hexadecamers.; glyceraldehyde-3-phosphate dehydrogenase B subunit (GAPB); FUNCTIONS IN: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828), Protein of unknown function CP12 (InterPro:IPR003823); BEST Arabidopsis thaliana protein match is: glyceraldehyde 3-phosphate dehydrogenase A subunit (TAIR:AT3G26650.1); Has 24904 Blast hits to 24897 proteins in 6198 species: Archae - 41; Bacteria - 10859; Metazoa - 2228; Fungi - 2814; Plants - 3753; Viruses - 0; Other Eukaryotes - 5209 (source: NCBI BLink). & (gnl|cdd|76080 : 494.0) no description available & (gnl|cdd|35876 : 290.0) no description available & (reliability: 1380.0) & (original description: Putative GAPB, Description = Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic, PFAM = PF00044;PF02800)' T '1.3.4' 'PS.calvin cycle.GAP' 'niben101scf03133_7775-12877' '(p12859|g3pb_pea : 712.0) Glyceraldehyde-3-phosphate dehydrogenase B, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit B) - Pisum sativum (Garden pea) & (at1g42970 : 692.0) Encodes chloroplast localized glyceraldehyde-3-phosphate dehydrogenase that can use both NADH and NADPH to reduce 1,3-diphosphate glycerate. It forms A2B2 heterotetramers with GapA forms of the GADPH enzyme. These complexes are active in the light under reducing conditions, but show reduced NADPH-dependent activity in response to oxidized thioredoxins and increased NAD(H)/NADP(H) ratios due to the formation of inactive A8B8 hexadecamers.; glyceraldehyde-3-phosphate dehydrogenase B subunit (GAPB); FUNCTIONS IN: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828), Protein of unknown function CP12 (InterPro:IPR003823); BEST Arabidopsis thaliana protein match is: glyceraldehyde 3-phosphate dehydrogenase A subunit (TAIR:AT3G26650.1); Has 24904 Blast hits to 24897 proteins in 6198 species: Archae - 41; Bacteria - 10859; Metazoa - 2228; Fungi - 2814; Plants - 3753; Viruses - 0; Other Eukaryotes - 5209 (source: NCBI BLink). & (gnl|cdd|76080 : 503.0) no description available & (gnl|cdd|35876 : 290.0) no description available & (reliability: 1384.0) & (original description: Putative GAPB, Description = Glyceraldehyde-3-phosphate dehydrogenase GAPB, chloroplastic, PFAM = PF02800;PF02672;PF00044)' T '1.3.4' 'PS.calvin cycle.GAP' 'niben101scf05177_276043-280333' '(p09043|g3pa_tobac : 661.0) Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit A) (Fragment) - Nicotiana tabacum (Common tobacco) & (at1g12900 : 610.0) glyceraldehyde 3-phosphate dehydrogenase A subunit 2 (GAPA-2); FUNCTIONS IN: NAD or NADH binding, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: oxidation reduction, glycolysis, glucose metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde 3-phosphate dehydrogenase A subunit (TAIR:AT3G26650.1). & (gnl|cdd|76080 : 496.0) no description available & (gnl|cdd|35876 : 301.0) no description available & (reliability: 1220.0) & (original description: Putative gapA, Description = Glyceraldehyde-3-phosphate dehydrogenase, PFAM = PF02800;PF00044)' T '1.3.4' 'PS.calvin cycle.GAP' 'niben101scf05188_312371-317970' '(p09043|g3pa_tobac : 664.0) Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit A) (Fragment) - Nicotiana tabacum (Common tobacco) & (at3g26650 : 611.0) Encodes one of the two subunits forming the photosynthetic glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and as such a constituent of the supramolecular complex with phosphoribulokinase (PRK) thought to be linked by a small peptide encoded by CP12-2. GapA-1 is coordinately expressed by light with PRK and CP12-2. The enzyme activity, tested in leaf protein extracts dropped significantly after external sucrose treatment for the photosynthetic GAPDH (NADPH-dependent) but not for the cytosolic GAPDH (NADH-dependent).; glyceraldehyde 3-phosphate dehydrogenase A subunit (GAPA); FUNCTIONS IN: protein binding, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde 3-phosphate dehydrogenase A subunit 2 (TAIR:AT1G12900.1); Has 24893 Blast hits to 24884 proteins in 6192 species: Archae - 47; Bacteria - 10870; Metazoa - 2226; Fungi - 2780; Plants - 3758; Viruses - 0; Other Eukaryotes - 5212 (source: NCBI BLink). & (gnl|cdd|76080 : 494.0) no description available & (gnl|cdd|35876 : 300.0) no description available & (reliability: 1222.0) & (original description: Putative GAPA, Description = Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic, PFAM = PF02800;PF00044)' T '1.3.4' 'PS.calvin cycle.GAP' 'niben101scf05226_403421-408477' '(p12859|g3pb_pea : 710.0) Glyceraldehyde-3-phosphate dehydrogenase B, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit B) - Pisum sativum (Garden pea) & (at1g42970 : 690.0) Encodes chloroplast localized glyceraldehyde-3-phosphate dehydrogenase that can use both NADH and NADPH to reduce 1,3-diphosphate glycerate. It forms A2B2 heterotetramers with GapA forms of the GADPH enzyme. These complexes are active in the light under reducing conditions, but show reduced NADPH-dependent activity in response to oxidized thioredoxins and increased NAD(H)/NADP(H) ratios due to the formation of inactive A8B8 hexadecamers.; glyceraldehyde-3-phosphate dehydrogenase B subunit (GAPB); FUNCTIONS IN: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828), Protein of unknown function CP12 (InterPro:IPR003823); BEST Arabidopsis thaliana protein match is: glyceraldehyde 3-phosphate dehydrogenase A subunit (TAIR:AT3G26650.1); Has 24904 Blast hits to 24897 proteins in 6198 species: Archae - 41; Bacteria - 10859; Metazoa - 2228; Fungi - 2814; Plants - 3753; Viruses - 0; Other Eukaryotes - 5209 (source: NCBI BLink). & (gnl|cdd|76080 : 501.0) no description available & (gnl|cdd|35876 : 288.0) no description available & (reliability: 1380.0) & (original description: Putative GAPB, Description = Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic, PFAM = PF02800;PF02672;PF00044)' T '1.3.5' 'PS.calvin cycle.TPI' 'niben044scf00008157ctg005_616-4608' '(p48496|tpic_spiol : 359.0) Triosephosphate isomerase, chloroplast precursor (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Spinacia oleracea (Spinach) & (at2g21170 : 348.0) Encodes a plastidic triose phosphate isomerase. Mutants with reduced pdTPI levels have difficulty transitioning from heterotrophic to autotrophic growth. The related phenotypes, such as chlorosis in light-grown seedlings may result from an accumulation of dihydroxyacetone phosphate (DHAP) and methylglyoxal (MG) in these mutants. Both splice variants appear to be expressed, but the At2g21170.2 variant appears to have a much narrower expression range limited to roots.; triosephosphate isomerase (TIM); FUNCTIONS IN: triose-phosphate isomerase activity; INVOLVED IN: in 7 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT3G55440.1); Has 11527 Blast hits to 11525 proteins in 3623 species: Archae - 144; Bacteria - 6185; Metazoa - 1204; Fungi - 240; Plants - 472; Viruses - 0; Other Eukaryotes - 3282 (source: NCBI BLink). & (gnl|cdd|36856 : 329.0) no description available & (gnl|cdd|73362 : 283.0) no description available & (reliability: 696.0) & (original description: Putative TPI, Description = Triosephosphate isomerase, cytosolic, PFAM = PF00121)' T '1.3.5' 'PS.calvin cycle.TPI' 'niben044scf00017105ctg002_1-5289' '(p48496|tpic_spiol : 504.0) Triosephosphate isomerase, chloroplast precursor (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Spinacia oleracea (Spinach) & (at2g21170 : 463.0) Encodes a plastidic triose phosphate isomerase. Mutants with reduced pdTPI levels have difficulty transitioning from heterotrophic to autotrophic growth. The related phenotypes, such as chlorosis in light-grown seedlings may result from an accumulation of dihydroxyacetone phosphate (DHAP) and methylglyoxal (MG) in these mutants. Both splice variants appear to be expressed, but the At2g21170.2 variant appears to have a much narrower expression range limited to roots.; triosephosphate isomerase (TIM); FUNCTIONS IN: triose-phosphate isomerase activity; INVOLVED IN: in 7 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT3G55440.1); Has 11527 Blast hits to 11525 proteins in 3623 species: Archae - 144; Bacteria - 6185; Metazoa - 1204; Fungi - 240; Plants - 472; Viruses - 0; Other Eukaryotes - 3282 (source: NCBI BLink). & (gnl|cdd|36856 : 388.0) no description available & (gnl|cdd|73362 : 330.0) no description available & (reliability: 926.0) & (original description: Putative TPIP1, Description = Triosephosphate isomerase, chloroplastic, PFAM = PF00121)' T '1.3.5' 'PS.calvin cycle.TPI' 'niben101scf01847_217327-223783' '(p48496|tpic_spiol : 506.0) Triosephosphate isomerase, chloroplast precursor (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Spinacia oleracea (Spinach) & (at2g21170 : 464.0) Encodes a plastidic triose phosphate isomerase. Mutants with reduced pdTPI levels have difficulty transitioning from heterotrophic to autotrophic growth. The related phenotypes, such as chlorosis in light-grown seedlings may result from an accumulation of dihydroxyacetone phosphate (DHAP) and methylglyoxal (MG) in these mutants. Both splice variants appear to be expressed, but the At2g21170.2 variant appears to have a much narrower expression range limited to roots.; triosephosphate isomerase (TIM); FUNCTIONS IN: triose-phosphate isomerase activity; INVOLVED IN: in 7 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT3G55440.1); Has 11527 Blast hits to 11525 proteins in 3623 species: Archae - 144; Bacteria - 6185; Metazoa - 1204; Fungi - 240; Plants - 472; Viruses - 0; Other Eukaryotes - 3282 (source: NCBI BLink). & (gnl|cdd|36856 : 391.0) no description available & (gnl|cdd|73362 : 331.0) no description available & (reliability: 928.0) & (original description: Putative TPIP1, Description = Triosephosphate isomerase, chloroplastic, PFAM = PF00121)' T '1.3.5' 'PS.calvin cycle.TPI' 'niben101scf04327_100702-108973' '(p48496|tpic_spiol : 485.0) Triosephosphate isomerase, chloroplast precursor (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Spinacia oleracea (Spinach) & (at2g21170 : 450.0) Encodes a plastidic triose phosphate isomerase. Mutants with reduced pdTPI levels have difficulty transitioning from heterotrophic to autotrophic growth. The related phenotypes, such as chlorosis in light-grown seedlings may result from an accumulation of dihydroxyacetone phosphate (DHAP) and methylglyoxal (MG) in these mutants. Both splice variants appear to be expressed, but the At2g21170.2 variant appears to have a much narrower expression range limited to roots.; triosephosphate isomerase (TIM); FUNCTIONS IN: triose-phosphate isomerase activity; INVOLVED IN: in 7 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT3G55440.1); Has 11527 Blast hits to 11525 proteins in 3623 species: Archae - 144; Bacteria - 6185; Metazoa - 1204; Fungi - 240; Plants - 472; Viruses - 0; Other Eukaryotes - 3282 (source: NCBI BLink). & (gnl|cdd|36856 : 394.0) no description available & (gnl|cdd|73362 : 332.0) no description available & (reliability: 900.0) & (original description: Putative TPIP1, Description = Triosephosphate isomerase, chloroplastic, PFAM = PF00121)' T '1.3.6' 'PS.calvin cycle.aldolase' 'nbv0.3scaffold39997_10712-15185' '(gnl|cdd|84661 : 618.0) no description available & (at4g26530 : 603.0) Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: glycolysis, metabolic process; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT4G26520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46256|alf1_pea : 594.0) Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 (EC 4.1.2.13) - Pisum sativum (Garden pea) & (gnl|cdd|36770 : 583.0) no description available & (reliability: 1206.0) & (original description: Putative ald, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T '1.3.6' 'PS.calvin cycle.aldolase' 'nbv0.3scaffold41032_7542-12672' '(gnl|cdd|84661 : 614.0) no description available & (at4g26530 : 597.0) Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: glycolysis, metabolic process; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT4G26520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46256|alf1_pea : 590.0) Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 (EC 4.1.2.13) - Pisum sativum (Garden pea) & (gnl|cdd|36770 : 579.0) no description available & (reliability: 1194.0) & (original description: Putative ald, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T '1.3.6' 'PS.calvin cycle.aldolase' 'nbv0.5scaffold1469_367538-372476' '(gnl|cdd|84661 : 614.0) no description available & (at4g26530 : 592.0) Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: glycolysis, metabolic process; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT4G26520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46256|alf1_pea : 583.0) Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 (EC 4.1.2.13) - Pisum sativum (Garden pea) & (gnl|cdd|36770 : 576.0) no description available & (reliability: 1184.0) & (original description: Putative ald, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T '1.3.6' 'PS.calvin cycle.aldolase' 'niben044scf00004219ctg018_5933-10852' '(at4g38970 : 672.0) Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; fructose-bisphosphate aldolase 2 (FBA2); FUNCTIONS IN: fructose-bisphosphate aldolase activity, catalytic activity; INVOLVED IN: response to cadmium ion, pentose-phosphate shunt, response to abscisic acid stimulus; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 1 (TAIR:AT2G21330.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q40677|alfc_orysa : 648.0) Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP) - Oryza sativa (Rice) & (gnl|cdd|84661 : 610.0) no description available & (gnl|cdd|36770 : 556.0) no description available & (reliability: 1344.0) & (original description: Putative FBA2, Description = Probable fructose-bisphosphate aldolase 2, chloroplastic, PFAM = PF00274)' T '1.3.6' 'PS.calvin cycle.aldolase' 'niben044scf00028064ctg000_4428-9998' '(at4g38970 : 670.0) Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; fructose-bisphosphate aldolase 2 (FBA2); FUNCTIONS IN: fructose-bisphosphate aldolase activity, catalytic activity; INVOLVED IN: response to cadmium ion, pentose-phosphate shunt, response to abscisic acid stimulus; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 1 (TAIR:AT2G21330.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q40677|alfc_orysa : 652.0) Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP) - Oryza sativa (Rice) & (gnl|cdd|84661 : 615.0) no description available & (gnl|cdd|36770 : 563.0) no description available & (reliability: 1340.0) & (original description: Putative ald, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T '1.3.6' 'PS.calvin cycle.aldolase' 'niben044scf00042047ctg002_6186-10929' '(at4g38970 : 661.0) Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; fructose-bisphosphate aldolase 2 (FBA2); FUNCTIONS IN: fructose-bisphosphate aldolase activity, catalytic activity; INVOLVED IN: response to cadmium ion, pentose-phosphate shunt, response to abscisic acid stimulus; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 1 (TAIR:AT2G21330.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q40677|alfc_orysa : 654.0) Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP) - Oryza sativa (Rice) & (gnl|cdd|84661 : 618.0) no description available & (gnl|cdd|36770 : 559.0) no description available & (reliability: 1322.0) & (original description: Putative FBA2, Description = Probable fructose-bisphosphate aldolase 2, chloroplastic, PFAM = PF00274)' T '1.3.6' 'PS.calvin cycle.aldolase' 'niben044scf00050323ctg000_12010-18482' '(gnl|cdd|84661 : 611.0) no description available & (p17784|alf_orysa : 600.0) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) & (at2g36460 : 597.0) Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to salt stress, pentose-phosphate shunt; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT3G52930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36770 : 586.0) no description available & (reliability: 1104.0) & (original description: Putative alf, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T '1.3.6' 'PS.calvin cycle.aldolase' 'niben101scf00302_116509-123697' '(gnl|cdd|84661 : 614.0) no description available & (p17784|alf_orysa : 603.0) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) & (at2g36460 : 599.0) Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to salt stress, pentose-phosphate shunt; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT3G52930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36770 : 588.0) no description available & (reliability: 1106.0) & (original description: Putative alf, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T '1.3.6' 'PS.calvin cycle.aldolase' 'niben101scf00466_40644-46031' '(at4g38970 : 669.0) Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; fructose-bisphosphate aldolase 2 (FBA2); FUNCTIONS IN: fructose-bisphosphate aldolase activity, catalytic activity; INVOLVED IN: response to cadmium ion, pentose-phosphate shunt, response to abscisic acid stimulus; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 1 (TAIR:AT2G21330.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q40677|alfc_orysa : 652.0) Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP) - Oryza sativa (Rice) & (gnl|cdd|84661 : 614.0) no description available & (gnl|cdd|36770 : 561.0) no description available & (reliability: 1338.0) & (original description: Putative FBA2, Description = Probable fructose-bisphosphate aldolase 2, chloroplastic, PFAM = PF00274)' T '1.3.6' 'PS.calvin cycle.aldolase' 'niben101scf00675_158544-163325' '(gnl|cdd|84661 : 616.0) no description available & (at4g26530 : 595.0) Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: glycolysis, metabolic process; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT4G26520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46256|alf1_pea : 587.0) Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 (EC 4.1.2.13) - Pisum sativum (Garden pea) & (gnl|cdd|36770 : 577.0) no description available & (reliability: 1190.0) & (original description: Putative ald, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T '1.3.6' 'PS.calvin cycle.aldolase' 'niben101scf01025_125422-131732' '(at4g38970 : 674.0) Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; fructose-bisphosphate aldolase 2 (FBA2); FUNCTIONS IN: fructose-bisphosphate aldolase activity, catalytic activity; INVOLVED IN: response to cadmium ion, pentose-phosphate shunt, response to abscisic acid stimulus; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 1 (TAIR:AT2G21330.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q40677|alfc_orysa : 652.0) Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP) - Oryza sativa (Rice) & (gnl|cdd|84661 : 608.0) no description available & (gnl|cdd|36770 : 559.0) no description available & (reliability: 1348.0) & (original description: Putative FBA2, Description = Probable fructose-bisphosphate aldolase 2, chloroplastic, PFAM = PF00274)' T '1.3.6' 'PS.calvin cycle.aldolase' 'niben101scf01460_237638-242867' '(at2g01140 : 653.0) Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, pentose-phosphate shunt; LOCATED IN: mitochondrion, chloroplast, plastoglobule; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 2 (TAIR:AT4G38970.1); Has 4797 Blast hits to 4792 proteins in 909 species: Archae - 0; Bacteria - 723; Metazoa - 1159; Fungi - 8; Plants - 476; Viruses - 0; Other Eukaryotes - 2431 (source: NCBI BLink). & (gnl|cdd|84661 : 611.0) no description available & (q01516|alfc_pea : 600.0) Fructose-bisphosphate aldolase 1, chloroplast precursor (EC 4.1.2.13) (Fragment) - Pisum sativum (Garden pea) & (gnl|cdd|36770 : 554.0) no description available & (reliability: 1306.0) & (original description: Putative FBA3, Description = Probable fructose-bisphosphate aldolase 3, chloroplastic, PFAM = PF00274)' T '1.3.6' 'PS.calvin cycle.aldolase' 'niben101scf02864_447736-452230' '(at4g38970 : 662.0) Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; fructose-bisphosphate aldolase 2 (FBA2); FUNCTIONS IN: fructose-bisphosphate aldolase activity, catalytic activity; INVOLVED IN: response to cadmium ion, pentose-phosphate shunt, response to abscisic acid stimulus; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 1 (TAIR:AT2G21330.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q40677|alfc_orysa : 653.0) Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP) - Oryza sativa (Rice) & (gnl|cdd|84661 : 617.0) no description available & (gnl|cdd|36770 : 559.0) no description available & (reliability: 1324.0) & (original description: Putative ald, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T '1.3.6' 'PS.calvin cycle.aldolase' 'niben101scf03580_286138-289953' '(gnl|cdd|84661 : 615.0) no description available & (at2g36460 : 604.0) Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to salt stress, pentose-phosphate shunt; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT3G52930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p17784|alf_orysa : 602.0) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) & (gnl|cdd|36770 : 592.0) no description available & (reliability: 1112.0) & (original description: Putative fba, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T '1.3.6' 'PS.calvin cycle.aldolase' 'niben101scf04024_74325-76633' '(at2g01140 : 164.0) Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, pentose-phosphate shunt; LOCATED IN: mitochondrion, chloroplast, plastoglobule; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 2 (TAIR:AT4G38970.1); Has 4797 Blast hits to 4792 proteins in 909 species: Archae - 0; Bacteria - 723; Metazoa - 1159; Fungi - 8; Plants - 476; Viruses - 0; Other Eukaryotes - 2431 (source: NCBI BLink). & (gnl|cdd|84661 : 159.0) no description available & (q01516|alfc_pea : 152.0) Fructose-bisphosphate aldolase 1, chloroplast precursor (EC 4.1.2.13) (Fragment) - Pisum sativum (Garden pea) & (gnl|cdd|36770 : 127.0) no description available & (reliability: 328.0) & (original description: Putative ald, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T '1.3.6' 'PS.calvin cycle.aldolase' 'niben101scf05536_245531-250209' '(at4g38970 : 674.0) Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; fructose-bisphosphate aldolase 2 (FBA2); FUNCTIONS IN: fructose-bisphosphate aldolase activity, catalytic activity; INVOLVED IN: response to cadmium ion, pentose-phosphate shunt, response to abscisic acid stimulus; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 1 (TAIR:AT2G21330.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q40677|alfc_orysa : 650.0) Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP) - Oryza sativa (Rice) & (gnl|cdd|84661 : 611.0) no description available & (gnl|cdd|36770 : 558.0) no description available & (reliability: 1348.0) & (original description: Putative FBA2, Description = Probable fructose-bisphosphate aldolase 2, chloroplastic, PFAM = PF00274)' T '1.3.6' 'PS.calvin cycle.aldolase' 'niben101scf09014_104627-108475' '(gnl|cdd|84661 : 617.0) no description available & (at2g36460 : 607.0) Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to salt stress, pentose-phosphate shunt; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT3G52930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p17784|alf_orysa : 602.0) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) & (gnl|cdd|36770 : 595.0) no description available & (reliability: 1122.0) & (original description: Putative alf, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T '1.3.7' 'PS.calvin cycle.FBPase' 'nbv0.5scaffold3646_148781-153180' '(p46275|f16p1_pea : 603.0) Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Pisum sativum (Garden pea) & (at3g54050 : 600.0) Encodes HCEF1 (High Cyclic Electron Flow 1). Mutant phenotype: constitutively elevated electron flow (CEFI).; high cyclic electron flow 1 (HCEF1); FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: response to cold, photosynthetic electron transport in photosystem I, fructose metabolic process; LOCATED IN: stromule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1). & (gnl|cdd|36671 : 477.0) no description available & (gnl|cdd|30130 : 470.0) no description available & (reliability: 1200.0) & (original description: Putative fbp, Description = Fructose-1,6-bisphosphatase, PFAM = PF00316)' T '1.3.7' 'PS.calvin cycle.FBPase' 'niben044scf00029060ctg005_8891-13290' '(p46275|f16p1_pea : 618.0) Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Pisum sativum (Garden pea) & (at3g54050 : 616.0) Encodes HCEF1 (High Cyclic Electron Flow 1). Mutant phenotype: constitutively elevated electron flow (CEFI).; high cyclic electron flow 1 (HCEF1); FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: response to cold, photosynthetic electron transport in photosystem I, fructose metabolic process; LOCATED IN: stromule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1). & (gnl|cdd|36671 : 477.0) no description available & (gnl|cdd|30130 : 466.0) no description available & (reliability: 1232.0) & (original description: Putative fbp, Description = Fructose-1,6-bisphosphatase, PFAM = PF00316)' T '1.3.7' 'PS.calvin cycle.FBPase' 'niben101scf01406_331041-335551' '(p46275|f16p1_pea : 600.0) Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Pisum sativum (Garden pea) & (at3g54050 : 599.0) Encodes HCEF1 (High Cyclic Electron Flow 1). Mutant phenotype: constitutively elevated electron flow (CEFI).; high cyclic electron flow 1 (HCEF1); FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: response to cold, photosynthetic electron transport in photosystem I, fructose metabolic process; LOCATED IN: stromule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1). & (gnl|cdd|36671 : 459.0) no description available & (gnl|cdd|30130 : 451.0) no description available & (reliability: 1198.0) & (original description: Putative fbp, Description = Fructose-1,6-bisphosphatase, PFAM = PF00316;PF00316)' T '1.3.7' 'PS.calvin cycle.FBPase' 'niben101scf02479_276827-280853' '(o64422|f16p1_orysa : 532.0) Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Oryza sativa (Rice) & (at3g54050 : 525.0) Encodes HCEF1 (High Cyclic Electron Flow 1). Mutant phenotype: constitutively elevated electron flow (CEFI).; high cyclic electron flow 1 (HCEF1); FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: response to cold, photosynthetic electron transport in photosystem I, fructose metabolic process; LOCATED IN: stromule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1). & (gnl|cdd|36671 : 440.0) no description available & (gnl|cdd|30130 : 432.0) no description available & (reliability: 1050.0) & (original description: Putative fbp, Description = Fructose-1,6-bisphosphatase, PFAM = PF00316)' T '1.3.7' 'PS.calvin cycle.FBPase' 'niben101scf05048_54552-58713' '(q07204|f16p1_brana : 622.0) Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Brassica napus (Rape) & (at3g54050 : 615.0) Encodes HCEF1 (High Cyclic Electron Flow 1). Mutant phenotype: constitutively elevated electron flow (CEFI).; high cyclic electron flow 1 (HCEF1); FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: response to cold, photosynthetic electron transport in photosystem I, fructose metabolic process; LOCATED IN: stromule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1). & (gnl|cdd|36671 : 470.0) no description available & (gnl|cdd|30130 : 463.0) no description available & (reliability: 1230.0) & (original description: Putative fbp, Description = Fructose-1,6-bisphosphatase, PFAM = PF00316)' T '1.3.7' 'PS.calvin cycle.FBPase' 'niben101scf10316_235599-239676' '(p46275|f16p1_pea : 625.0) Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Pisum sativum (Garden pea) & (at3g54050 : 619.0) Encodes HCEF1 (High Cyclic Electron Flow 1). Mutant phenotype: constitutively elevated electron flow (CEFI).; high cyclic electron flow 1 (HCEF1); FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: response to cold, photosynthetic electron transport in photosystem I, fructose metabolic process; LOCATED IN: stromule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1). & (gnl|cdd|36671 : 484.0) no description available & (gnl|cdd|30130 : 471.0) no description available & (reliability: 1238.0) & (original description: Putative FBP, Description = Fructose-1,6-bisphosphatase, chloroplastic, PFAM = PF00316)' T '1.3.7' 'PS.calvin cycle.FBPase' 'niben101scf14310_1-3533' '(at5g64380 : 528.0) Inositol monophosphatase family protein; FUNCTIONS IN: phosphoric ester hydrolase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: high cyclic electron flow 1 (TAIR:AT3G54050.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36671 : 367.0) no description available & (gnl|cdd|30130 : 352.0) no description available & (p22418|f16p1_spiol : 266.0) Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Spinacia oleracea (Spinach) & (reliability: 1056.0) & (original description: Putative FBP2, Description = Fructose-1,6-bisphosphatase, PFAM = PF00316)' T '1.3.8' 'PS.calvin cycle.transketolase' 'nbv0.3scaffold59808_1021-7340' '(q43848|tktc_soltu : 1284.0) Transketolase, chloroplast precursor (EC 2.2.1.1) (TK) - Solanum tuberosum (Potato) & (at2g45290 : 1196.0) Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, bacterial-like (InterPro:IPR005478), Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT3G60750.1); Has 19460 Blast hits to 19400 proteins in 2776 species: Archae - 200; Bacteria - 11520; Metazoa - 310; Fungi - 312; Plants - 211; Viruses - 0; Other Eukaryotes - 6907 (source: NCBI BLink). & (gnl|cdd|30371 : 1001.0) no description available & (gnl|cdd|35743 : 755.0) no description available & (reliability: 2392.0) & (original description: Putative cbbT, Description = Transketolase, PFAM = PF00456;PF02780;PF02779)' T '1.3.8' 'PS.calvin cycle.transketolase' 'nbv0.5scaffold3829_360668-368805' '(gnl|cdd|30371 : 849.0) no description available & (at3g60750 : 760.0) Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826), Transketolase, bacterial-like (InterPro:IPR005478), Transketolase-like, C-terminal (InterPro:IPR015941); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT2G45290.1). & (q43848|tktc_soltu : 756.0) Transketolase, chloroplast precursor (EC 2.2.1.1) (TK) - Solanum tuberosum (Potato) & (gnl|cdd|35743 : 570.0) no description available & (reliability: 1520.0) & (original description: Putative cbbT, Description = Transketolase, PFAM = PF02779;PF02780;PF00456)' T '1.3.8' 'PS.calvin cycle.transketolase' 'nbv0.5scaffold6578_45542-52464' '(q43848|tktc_soltu : 1267.0) Transketolase, chloroplast precursor (EC 2.2.1.1) (TK) - Solanum tuberosum (Potato) & (at2g45290 : 1187.0) Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, bacterial-like (InterPro:IPR005478), Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT3G60750.1); Has 19460 Blast hits to 19400 proteins in 2776 species: Archae - 200; Bacteria - 11520; Metazoa - 310; Fungi - 312; Plants - 211; Viruses - 0; Other Eukaryotes - 6907 (source: NCBI BLink). & (gnl|cdd|30371 : 1011.0) no description available & (gnl|cdd|35743 : 761.0) no description available & (reliability: 2374.0) & (original description: Putative cbbT, Description = Transketolase, PFAM = PF02779;PF02780;PF00456)' T '1.3.8' 'PS.calvin cycle.transketolase' 'niben044scf00008412ctg007_1064-7782' '(q43848|tktc_soltu : 1246.0) Transketolase, chloroplast precursor (EC 2.2.1.1) (TK) - Solanum tuberosum (Potato) & (at3g60750 : 1181.0) Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826), Transketolase, bacterial-like (InterPro:IPR005478), Transketolase-like, C-terminal (InterPro:IPR015941); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT2G45290.1). & (gnl|cdd|30371 : 1001.0) no description available & (gnl|cdd|35743 : 756.0) no description available & (reliability: 2362.0) & (original description: Putative cbbT, Description = Transketolase, PFAM = PF02780;PF00456;PF02779)' T '1.3.8' 'PS.calvin cycle.transketolase' 'niben044scf00013564ctg004_1467-8064' '(gnl|cdd|30371 : 834.0) no description available & (at3g60750 : 743.0) Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826), Transketolase, bacterial-like (InterPro:IPR005478), Transketolase-like, C-terminal (InterPro:IPR015941); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT2G45290.1). & (q43848|tktc_soltu : 737.0) Transketolase, chloroplast precursor (EC 2.2.1.1) (TK) - Solanum tuberosum (Potato) & (gnl|cdd|35743 : 557.0) no description available & (reliability: 1486.0) & (original description: Putative cbbT, Description = Transketolase, PFAM = PF00456;PF02779)' T '1.3.9' 'PS.calvin cycle.seduheptulose bisphosphatase' 'niben101scf02280_897752-902927' '(o20252|s17p_spiol : 627.0) Sedoheptulose-1,7-bisphosphatase, chloroplast precursor (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase) (SED(1,7)P2ase) - Spinacia oleracea (Spinach) & (at3g55800 : 603.0) Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type.; sedoheptulose-bisphosphatase (SBPASE); FUNCTIONS IN: sedoheptulose-bisphosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1); Has 3745 Blast hits to 3741 proteins in 1296 species: Archae - 47; Bacteria - 2318; Metazoa - 373; Fungi - 154; Plants - 424; Viruses - 0; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|84688 : 360.0) no description available & (gnl|cdd|36671 : 353.0) no description available & (reliability: 1206.0) & (original description: Putative sbp, Description = Putative sedoheptulose-1,7-bisphosphatase, PFAM = PF00316)' T '1.3.9' 'PS.calvin cycle.seduheptulose bisphosphatase' 'niben101scf03500_244965-261091' '(o20252|s17p_spiol : 627.0) Sedoheptulose-1,7-bisphosphatase, chloroplast precursor (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase) (SED(1,7)P2ase) - Spinacia oleracea (Spinach) & (at3g55800 : 622.0) Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type.; sedoheptulose-bisphosphatase (SBPASE); FUNCTIONS IN: sedoheptulose-bisphosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1); Has 3745 Blast hits to 3741 proteins in 1296 species: Archae - 47; Bacteria - 2318; Metazoa - 373; Fungi - 154; Plants - 424; Viruses - 0; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|84688 : 356.0) no description available & (gnl|cdd|36671 : 353.0) no description available & (reliability: 1244.0) & (original description: Putative fbp, Description = Sedoheptulose-1,7-bisphosphatase, PFAM = PF00316)' T '1.3.9' 'PS.calvin cycle.seduheptulose bisphosphatase' 'niben101scf05017_597956-622762' '(o20252|s17p_spiol : 607.0) Sedoheptulose-1,7-bisphosphatase, chloroplast precursor (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase) (SED(1,7)P2ase) - Spinacia oleracea (Spinach) & (at3g55800 : 602.0) Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type.; sedoheptulose-bisphosphatase (SBPASE); FUNCTIONS IN: sedoheptulose-bisphosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1); Has 3745 Blast hits to 3741 proteins in 1296 species: Archae - 47; Bacteria - 2318; Metazoa - 373; Fungi - 154; Plants - 424; Viruses - 0; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|84688 : 356.0) no description available & (gnl|cdd|36671 : 352.0) no description available & (reliability: 1204.0) & (original description: Putative fbp, Description = Sedoheptulose-1,7-bisphosphatase, PFAM = PF00316)' T '1.3.9' 'PS.calvin cycle.seduheptulose bisphosphatase' 'niben101scf09712_1-4347' '(o20252|s17p_spiol : 613.0) Sedoheptulose-1,7-bisphosphatase, chloroplast precursor (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase) (SED(1,7)P2ase) - Spinacia oleracea (Spinach) & (at3g55800 : 591.0) Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type.; sedoheptulose-bisphosphatase (SBPASE); FUNCTIONS IN: sedoheptulose-bisphosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1); Has 3745 Blast hits to 3741 proteins in 1296 species: Archae - 47; Bacteria - 2318; Metazoa - 373; Fungi - 154; Plants - 424; Viruses - 0; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|84688 : 361.0) no description available & (gnl|cdd|36671 : 356.0) no description available & (reliability: 1182.0) & (original description: Putative fbp, Description = Chloroplast sedoheptulose-1,7-bisphosphatase, PFAM = PF00316)' T '1.3.10' 'PS.calvin cycle.Rib5P Isomerase' 'nbv0.5scaffold6203_45393-49010' '(at3g04790 : 326.0) Ribose 5-phosphate isomerase, type A protein; FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: defense response to bacterium, reductive pentose-phosphate cycle; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: ribose-5-phosphate isomerase 2 (TAIR:AT2G01290.1); Has 5044 Blast hits to 5043 proteins in 1956 species: Archae - 235; Bacteria - 3572; Metazoa - 110; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 841 (source: NCBI BLink). & (gnl|cdd|38285 : 263.0) no description available & (gnl|cdd|73164 : 257.0) no description available & (reliability: 652.0) & (original description: Putative RPI3, Description = Probable ribose-5-phosphate isomerase 3, chloroplastic, PFAM = PF06026)' T '1.3.10' 'PS.calvin cycle.Rib5P Isomerase' 'niben101scf00271_686755-692433' '(at5g44520 : 289.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: glucose catabolic process to lactate and acetate, 5-phosphoribose 1-diphosphate biosynthetic process, reductive pentose-phosphate cycle, D-ribose catabolic process, pentose-phosphate shunt, non-oxidative branch; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: Ribose 5-phosphate isomerase, type A protein (TAIR:AT3G04790.1); Has 2560 Blast hits to 2560 proteins in 1021 species: Archae - 184; Bacteria - 1763; Metazoa - 86; Fungi - 39; Plants - 144; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink). & (gnl|cdd|38285 : 178.0) no description available & (gnl|cdd|73164 : 154.0) no description available & (reliability: 578.0) & (original description: Putative RPI4, Description = Probable ribose-5-phosphate isomerase 4, chloroplastic, PFAM = PF06026)' T '1.3.10' 'PS.calvin cycle.Rib5P Isomerase' 'niben101scf01534_78148-81005' '(at3g04790 : 323.0) Ribose 5-phosphate isomerase, type A protein; FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: defense response to bacterium, reductive pentose-phosphate cycle; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: ribose-5-phosphate isomerase 2 (TAIR:AT2G01290.1); Has 5044 Blast hits to 5043 proteins in 1956 species: Archae - 235; Bacteria - 3572; Metazoa - 110; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 841 (source: NCBI BLink). & (gnl|cdd|38285 : 264.0) no description available & (gnl|cdd|73164 : 260.0) no description available & (reliability: 646.0) & (original description: Putative RPI3, Description = Probable ribose-5-phosphate isomerase 3, chloroplastic, PFAM = PF06026)' T '1.3.10' 'PS.calvin cycle.Rib5P Isomerase' 'niben101scf02792_177429-183581' '(at3g04790 : 311.0) Ribose 5-phosphate isomerase, type A protein; FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: defense response to bacterium, reductive pentose-phosphate cycle; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: ribose-5-phosphate isomerase 2 (TAIR:AT2G01290.1); Has 5044 Blast hits to 5043 proteins in 1956 species: Archae - 235; Bacteria - 3572; Metazoa - 110; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 841 (source: NCBI BLink). & (gnl|cdd|38285 : 262.0) no description available & (gnl|cdd|73164 : 256.0) no description available & (reliability: 622.0) & (original description: Putative rpi, Description = Ribose-5-phosphate isomerase A, PFAM = PF06026;PF06026)' T '1.3.11' 'PS.calvin cycle.RPE' 'niben101scf00063_661534-670840' '(q43843|rpe_soltu : 514.0) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) (Fragment) - Solanum tuberosum (Potato) & (at5g61410 : 459.0) Arabidopsis thaliana ribulose-5-phosphate-3-epimerase mRNA; D-ribulose-5-phosphate-3-epimerase (RPE); FUNCTIONS IN: ribulose-phosphate 3-epimerase activity, catalytic activity; INVOLVED IN: response to cold, carbohydrate metabolic process, response to nematode, embryo development ending in seed dormancy; LOCATED IN: thylakoid, apoplast, stromule, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate 3-epimerase (InterPro:IPR000056), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G01850.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81646 : 335.0) no description available & (gnl|cdd|38321 : 289.0) no description available & (reliability: 918.0) & (original description: Putative cbbE, Description = Ribulose-phosphate 3-epimerase, PFAM = PF00834)' T '1.3.11' 'PS.calvin cycle.RPE' 'niben101scf00519_69004-80137' '(q43843|rpe_soltu : 511.0) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) (Fragment) - Solanum tuberosum (Potato) & (at5g61410 : 459.0) Arabidopsis thaliana ribulose-5-phosphate-3-epimerase mRNA; D-ribulose-5-phosphate-3-epimerase (RPE); FUNCTIONS IN: ribulose-phosphate 3-epimerase activity, catalytic activity; INVOLVED IN: response to cold, carbohydrate metabolic process, response to nematode, embryo development ending in seed dormancy; LOCATED IN: thylakoid, apoplast, stromule, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate 3-epimerase (InterPro:IPR000056), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G01850.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81646 : 335.0) no description available & (gnl|cdd|38321 : 290.0) no description available & (reliability: 918.0) & (original description: Putative cbbE, Description = Ribulose-phosphate 3-epimerase, PFAM = PF00834)' T '1.3.12' 'PS.calvin cycle.PRK' 'nbv0.5scaffold2302_31199-257665' '(p26302|kppr_wheat : 679.0) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19) (Phosphopentokinase) (PRKase) (PRK) - Triticum aestivum (Wheat) & (at1g32060 : 673.0) phosphoribulokinase (PRK); FUNCTIONS IN: protein binding, phosphoribulokinase activity, ATP binding; INVOLVED IN: response to cold, defense response to bacterium, biosynthetic process, peptidyl-cysteine S-nitrosylation; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Phosphoribulokinase (InterPro:IPR006082); BEST Arabidopsis thaliana protein match is: uridine kinase-like 5 (TAIR:AT3G27440.1); Has 6197 Blast hits to 6197 proteins in 2200 species: Archae - 37; Bacteria - 4118; Metazoa - 341; Fungi - 129; Plants - 1120; Viruses - 2; Other Eukaryotes - 450 (source: NCBI BLink). & (gnl|cdd|30199 : 491.0) no description available & (gnl|cdd|39404 : 232.0) no description available & (reliability: 1346.0) & (original description: Putative prk, Description = Phosphoribulokinase, PFAM = PF00485)' T '1.3.12' 'PS.calvin cycle.PRK' 'niben044scf00031448ctg002_2302-7734' '(p26302|kppr_wheat : 689.0) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19) (Phosphopentokinase) (PRKase) (PRK) - Triticum aestivum (Wheat) & (at1g32060 : 677.0) phosphoribulokinase (PRK); FUNCTIONS IN: protein binding, phosphoribulokinase activity, ATP binding; INVOLVED IN: response to cold, defense response to bacterium, biosynthetic process, peptidyl-cysteine S-nitrosylation; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Phosphoribulokinase (InterPro:IPR006082); BEST Arabidopsis thaliana protein match is: uridine kinase-like 5 (TAIR:AT3G27440.1); Has 6197 Blast hits to 6197 proteins in 2200 species: Archae - 37; Bacteria - 4118; Metazoa - 341; Fungi - 129; Plants - 1120; Viruses - 2; Other Eukaryotes - 450 (source: NCBI BLink). & (gnl|cdd|30199 : 494.0) no description available & (gnl|cdd|39404 : 232.0) no description available & (reliability: 1354.0) & (original description: Putative prk, Description = Phosphoribulokinase, PFAM = PF00485)' T '1.3.12' 'PS.calvin cycle.PRK' 'niben101scf10910_29833-37399' '(p26302|kppr_wheat : 684.0) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19) (Phosphopentokinase) (PRKase) (PRK) - Triticum aestivum (Wheat) & (at1g32060 : 676.0) phosphoribulokinase (PRK); FUNCTIONS IN: protein binding, phosphoribulokinase activity, ATP binding; INVOLVED IN: response to cold, defense response to bacterium, biosynthetic process, peptidyl-cysteine S-nitrosylation; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Phosphoribulokinase (InterPro:IPR006082); BEST Arabidopsis thaliana protein match is: uridine kinase-like 5 (TAIR:AT3G27440.1); Has 6197 Blast hits to 6197 proteins in 2200 species: Archae - 37; Bacteria - 4118; Metazoa - 341; Fungi - 129; Plants - 1120; Viruses - 2; Other Eukaryotes - 450 (source: NCBI BLink). & (gnl|cdd|30199 : 495.0) no description available & (gnl|cdd|39404 : 231.0) no description available & (reliability: 1352.0) & (original description: Putative prk, Description = Phosphoribulokinase, PFAM = PF00485)' T '1.3.13' 'PS.calvin cycle.rubisco interacting' 'nbv0.3scaffold27787_16526-21670' '(q40565|rca2_tobac : 884.0) Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplast precursor (RuBisCO activase 2) (RA 2) - Nicotiana tabacum (Common tobacco) & (at2g39730 : 714.0) Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco.; rubisco activase (RCA); FUNCTIONS IN: enzyme regulator activity, ADP binding, ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity, ATP binding; INVOLVED IN: response to cold, response to light stimulus, defense response to bacterium; LOCATED IN: in 10 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73110.1); Has 2322 Blast hits to 2274 proteins in 510 species: Archae - 328; Bacteria - 451; Metazoa - 248; Fungi - 425; Plants - 405; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (gnl|cdd|35870 : 356.0) no description available & (reliability: 1428.0) & (original description: Putative RCA, Description = Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic, PFAM = PF00004)' T '1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben044scf00034791ctg000_322-4932' '(at3g13470 : 787.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, protein refolding, cellular protein metabolic process; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: chaperonin 60 beta (TAIR:AT1G55490.2); Has 34219 Blast hits to 34175 proteins in 8725 species: Archae - 803; Bacteria - 21843; Metazoa - 1743; Fungi - 1612; Plants - 836; Viruses - 2; Other Eukaryotes - 7380 (source: NCBI BLink). & (p21241|rubb_brana : 785.0) RuBisCO large subunit-binding protein subunit beta, chloroplast precursor (60 kDa chaperonin subunit beta) (CPN-60 beta) - Brassica napus (Rape) & (gnl|cdd|48161 : 668.0) no description available & (gnl|cdd|35577 : 569.0) no description available & (reliability: 1562.0) & (original description: Putative cpnL, Description = 60 kDa chaperonin, PFAM = PF00118)' T '1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf01374_613956-619853' '(at1g55490 : 843.0) encodes the beta subunit of the chloroplast chaperonin 60, a homologue of bacterial GroEL. Mutants in this gene develops lesions on its leaves, expresses systemic acquired resistance (SAR) and develops accelerated cell death to heat shock stress. The protein has molecular chaperone activity for suppressing protein aggregation in vitro.; chaperonin 60 beta (CPN60B); FUNCTIONS IN: protein binding; INVOLVED IN: protein folding, systemic acquired resistance, cell death, response to cold, chaperone mediated protein folding requiring cofactor; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G13470.1); Has 34209 Blast hits to 34175 proteins in 8723 species: Archae - 804; Bacteria - 21846; Metazoa - 1741; Fungi - 1612; Plants - 841; Viruses - 2; Other Eukaryotes - 7363 (source: NCBI BLink). & (p08927|rubb_pea : 828.0) RuBisCO large subunit-binding protein subunit beta, chloroplast precursor (60 kDa chaperonin subunit beta) (CPN-60 beta) - Pisum sativum (Garden pea) & (gnl|cdd|48161 : 702.0) no description available & (gnl|cdd|35577 : 606.0) no description available & (reliability: 1686.0) & (original description: Putative cpnL, Description = 60 kDa chaperonin, PFAM = PF00118)' T '1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf01653_270016-274145' '(q40460|rca1_tobac : 866.0) Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplast precursor (RuBisCO activase 1) (RA 1) - Nicotiana tabacum (Common tobacco) & (at2g39730 : 726.0) Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco.; rubisco activase (RCA); FUNCTIONS IN: enzyme regulator activity, ADP binding, ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity, ATP binding; INVOLVED IN: response to cold, response to light stimulus, defense response to bacterium; LOCATED IN: in 10 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73110.1); Has 2322 Blast hits to 2274 proteins in 510 species: Archae - 328; Bacteria - 451; Metazoa - 248; Fungi - 425; Plants - 405; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (gnl|cdd|35870 : 345.0) no description available & (reliability: 1452.0) & (original description: Putative RCA, Description = Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic, PFAM = PF00004)' T '1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf01890_121913-130767' '(p21239|rub1_brana : 768.0) RuBisCO large subunit-binding protein subunit alpha, chloroplast precursor (60 kDa chaperonin subunit alpha) (CPN-60 alpha) (Fragment) - Brassica napus (Rape) & (at2g28000 : 749.0) Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding. Mutants display aberrant chloroplast and embryo development.; chaperonin-60alpha (CPN60A); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, chloroplast organization, embryo development; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT5G18820.1); Has 33896 Blast hits to 33887 proteins in 8716 species: Archae - 792; Bacteria - 21835; Metazoa - 1656; Fungi - 1573; Plants - 797; Viruses - 2; Other Eukaryotes - 7241 (source: NCBI BLink). & (gnl|cdd|48161 : 679.0) no description available & (gnl|cdd|35577 : 540.0) no description available & (reliability: 1498.0) & (original description: Putative groL, Description = 60 kDa chaperonin, PFAM = PF00118)' T '1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf02085_1227084-1230611' '(q40460|rca1_tobac : 638.0) Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplast precursor (RuBisCO activase 1) (RA 1) - Nicotiana tabacum (Common tobacco) & (at2g39730 : 600.0) Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco.; rubisco activase (RCA); FUNCTIONS IN: enzyme regulator activity, ADP binding, ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity, ATP binding; INVOLVED IN: response to cold, response to light stimulus, defense response to bacterium; LOCATED IN: in 10 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73110.1); Has 2322 Blast hits to 2274 proteins in 510 species: Archae - 328; Bacteria - 451; Metazoa - 248; Fungi - 425; Plants - 405; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (gnl|cdd|35870 : 299.0) no description available & (reliability: 1200.0) & (original description: Putative rca, Description = Ribulose bisphosphate carboxylase/oxygenase activase, PFAM = PF00004)' T '1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf02583_189731-194469' '(q40460|rca1_tobac : 885.0) Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplast precursor (RuBisCO activase 1) (RA 1) - Nicotiana tabacum (Common tobacco) & (at2g39730 : 746.0) Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco.; rubisco activase (RCA); FUNCTIONS IN: enzyme regulator activity, ADP binding, ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity, ATP binding; INVOLVED IN: response to cold, response to light stimulus, defense response to bacterium; LOCATED IN: in 10 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73110.1); Has 2322 Blast hits to 2274 proteins in 510 species: Archae - 328; Bacteria - 451; Metazoa - 248; Fungi - 425; Plants - 405; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (gnl|cdd|35870 : 356.0) no description available & (reliability: 1492.0) & (original description: Putative RCA, Description = Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic, PFAM = PF00004)' T '1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf03076_190333-197524' '(at5g18820 : 715.0) embryo defective 3007 (EMB3007); FUNCTIONS IN: ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: chaperonin-60alpha (TAIR:AT2G28000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|48161 : 662.0) no description available & (p08926|ruba_pea : 651.0) RuBisCO large subunit-binding protein subunit alpha, chloroplast precursor (60 kDa chaperonin subunit alpha) (CPN-60 alpha) - Pisum sativum (Garden pea) & (gnl|cdd|35577 : 542.0) no description available & (reliability: 1302.0) & (original description: Putative groL, Description = GroEL protein, PFAM = PF00118)' T '1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf03607_44928-55910' '(at4g20130 : 648.0) plastid transcriptionally active 14 (PTAC14); LOCATED IN: plastid chromosome, chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT1G24610.1); Has 493 Blast hits to 493 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 45; Fungi - 96; Plants - 292; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (reliability: 1296.0) & (original description: Putative PTAC14, Description = Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14, PFAM = PF00856;PF09273)' T '1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf05368_297922-302917' '(q40565|rca2_tobac : 877.0) Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplast precursor (RuBisCO activase 2) (RA 2) - Nicotiana tabacum (Common tobacco) & (at2g39730 : 709.0) Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco.; rubisco activase (RCA); FUNCTIONS IN: enzyme regulator activity, ADP binding, ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity, ATP binding; INVOLVED IN: response to cold, response to light stimulus, defense response to bacterium; LOCATED IN: in 10 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73110.1); Has 2322 Blast hits to 2274 proteins in 510 species: Archae - 328; Bacteria - 451; Metazoa - 248; Fungi - 425; Plants - 405; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (gnl|cdd|35870 : 357.0) no description available & (reliability: 1418.0) & (original description: Putative RCA, Description = Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic, PFAM = PF00004)' T '1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf05712_205270-211394' '(p94026|rbcmt_tobac : 939.0) Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor (EC 2.1.1.127) ([Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase) (RuBisCO methyltransferase) (RuBisCO LSMT) (rbcMT) & (at1g14030 : 603.0) Rubisco methyltransferase family protein; FUNCTIONS IN: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubisco methyltransferase (InterPro:IPR011192), SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1); Has 1278 Blast hits to 1271 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 262; Fungi - 348; Plants - 463; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|36551 : 185.0) no description available & (gnl|cdd|87855 : 128.0) no description available & (reliability: 1206.0) & (original description: Putative RBCMT, Description = Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic, PFAM = PF00856;PF09273)' T '1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf07141_45609-64177' '(at1g73110 : 589.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATPase activity, ATP binding; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: rubisco activase (TAIR:AT2G39730.1); Has 469 Blast hits to 469 proteins in 170 species: Archae - 27; Bacteria - 71; Metazoa - 17; Fungi - 60; Plants - 256; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|35870 : 318.0) no description available & (p93431|rca_orysa : 312.0) Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase) (RA) - Oryza sativa (Rice) & (reliability: 1178.0) & (original description: Putative RCA, Description = Ribulose bisphosphate carboxylase/oxygenase activase, PFAM = PF00004)' T '1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf07309_36636-43237' '(p08926|ruba_pea : 811.0) RuBisCO large subunit-binding protein subunit alpha, chloroplast precursor (60 kDa chaperonin subunit alpha) (CPN-60 alpha) - Pisum sativum (Garden pea) & (at2g28000 : 798.0) Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding. Mutants display aberrant chloroplast and embryo development.; chaperonin-60alpha (CPN60A); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, chloroplast organization, embryo development; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT5G18820.1); Has 33896 Blast hits to 33887 proteins in 8716 species: Archae - 792; Bacteria - 21835; Metazoa - 1656; Fungi - 1573; Plants - 797; Viruses - 2; Other Eukaryotes - 7241 (source: NCBI BLink). & (gnl|cdd|48161 : 702.0) no description available & (gnl|cdd|35577 : 574.0) no description available & (reliability: 1596.0) & (original description: Putative groL1, Description = 60 kDa chaperonin 1, PFAM = PF00118)' T '1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf08488_271918-276745' '(q40565|rca2_tobac : 700.0) Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplast precursor (RuBisCO activase 2) (RA 2) - Nicotiana tabacum (Common tobacco) & (at2g39730 : 570.0) Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco.; rubisco activase (RCA); FUNCTIONS IN: enzyme regulator activity, ADP binding, ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity, ATP binding; INVOLVED IN: response to cold, response to light stimulus, defense response to bacterium; LOCATED IN: in 10 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73110.1); Has 2322 Blast hits to 2274 proteins in 510 species: Archae - 328; Bacteria - 451; Metazoa - 248; Fungi - 425; Plants - 405; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (gnl|cdd|35870 : 300.0) no description available & (reliability: 1140.0) & (original description: Putative rca, Description = Rubisco activase, PFAM = PF00004)' T '1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf08898_65874-72731' '(at3g13470 : 853.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, protein refolding, cellular protein metabolic process; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: chaperonin 60 beta (TAIR:AT1G55490.2); Has 34219 Blast hits to 34175 proteins in 8725 species: Archae - 803; Bacteria - 21843; Metazoa - 1743; Fungi - 1612; Plants - 836; Viruses - 2; Other Eukaryotes - 7380 (source: NCBI BLink). & (p21241|rubb_brana : 834.0) RuBisCO large subunit-binding protein subunit beta, chloroplast precursor (60 kDa chaperonin subunit beta) (CPN-60 beta) - Brassica napus (Rape) & (gnl|cdd|80448 : 702.0) no description available & (gnl|cdd|35577 : 615.0) no description available & (reliability: 1700.0) & (original description: Putative cpnL, Description = 60 kDa chaperonin, PFAM = PF00118)' T '1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf09363_23979-29438' '(at1g55490 : 840.0) encodes the beta subunit of the chloroplast chaperonin 60, a homologue of bacterial GroEL. Mutants in this gene develops lesions on its leaves, expresses systemic acquired resistance (SAR) and develops accelerated cell death to heat shock stress. The protein has molecular chaperone activity for suppressing protein aggregation in vitro.; chaperonin 60 beta (CPN60B); FUNCTIONS IN: protein binding; INVOLVED IN: protein folding, systemic acquired resistance, cell death, response to cold, chaperone mediated protein folding requiring cofactor; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G13470.1); Has 34209 Blast hits to 34175 proteins in 8723 species: Archae - 804; Bacteria - 21846; Metazoa - 1741; Fungi - 1612; Plants - 841; Viruses - 2; Other Eukaryotes - 7363 (source: NCBI BLink). & (p08927|rubb_pea : 829.0) RuBisCO large subunit-binding protein subunit beta, chloroplast precursor (60 kDa chaperonin subunit beta) (CPN-60 beta) - Pisum sativum (Garden pea) & (gnl|cdd|48161 : 706.0) no description available & (gnl|cdd|35577 : 612.0) no description available & (reliability: 1680.0) & (original description: Putative groL, Description = 60 kDa chaperonin, PFAM = PF00118)' T '1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf10400_58528-64809' '(p08926|ruba_pea : 823.0) RuBisCO large subunit-binding protein subunit alpha, chloroplast precursor (60 kDa chaperonin subunit alpha) (CPN-60 alpha) - Pisum sativum (Garden pea) & (at2g28000 : 808.0) Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding. Mutants display aberrant chloroplast and embryo development.; chaperonin-60alpha (CPN60A); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, chloroplast organization, embryo development; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT5G18820.1); Has 33896 Blast hits to 33887 proteins in 8716 species: Archae - 792; Bacteria - 21835; Metazoa - 1656; Fungi - 1573; Plants - 797; Viruses - 2; Other Eukaryotes - 7241 (source: NCBI BLink). & (gnl|cdd|48161 : 706.0) no description available & (gnl|cdd|35577 : 576.0) no description available & (reliability: 1616.0) & (original description: Putative groL, Description = 60 kDa chaperonin, PFAM = PF00118)' T '1.3.13' 'PS.calvin cycle.rubisco interacting' 'niben101scf28395_64273-68921' '(q40460|rca1_tobac : 808.0) Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplast precursor (RuBisCO activase 1) (RA 1) - Nicotiana tabacum (Common tobacco) & (at2g39730 : 710.0) Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco.; rubisco activase (RCA); FUNCTIONS IN: enzyme regulator activity, ADP binding, ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity, ATP binding; INVOLVED IN: response to cold, response to light stimulus, defense response to bacterium; LOCATED IN: in 10 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73110.1); Has 2322 Blast hits to 2274 proteins in 510 species: Archae - 328; Bacteria - 451; Metazoa - 248; Fungi - 425; Plants - 405; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (gnl|cdd|35870 : 350.0) no description available & (reliability: 1420.0) & (original description: Putative RCA, Description = Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic, PFAM = PF00004)' T '1.3.1001' 'PS.calvin cycle.ribulose-1,5-bisP' 'ribulose-1,5-bisp' 'major CHO metabolism; PS.calvin cycle' M '1.3.1002' 'PS.calvin cycle' 'glycerate-3-p' 'major CHO metabolism; PS.calvin cycle; glycolysis; OPP.oxidative PP' M '1.3.1003' 'PS.calvin cycle' 'glycerate-1,3-bisp' 'major CHO metabolism; PS.calvin cycle; glycolysis; OPP.oxidative PP' M '1.3.1004' 'PS.calvin cycle' 'glyceraldehyde-3-p' 'major CHO metabolism; PS.calvin cycle; glycolysis; OPP.oxidative PP' M '1.3.1005' 'PS.calvin cycle' 'dihydroxyacetone-p' 'major CHO metabolism; PS.calvin cycle; glycolysis; OPP.oxidative PP' M '1.3.1006' 'PS.calvin cycle' 'fructose-1,6-bisp' 'major CHO metabolism; PS.calvin cycle; glycolysis; OPP.oxidative PP' M '1.3.1007' 'PS.calvin cycle' 'fructose-6-p' 'cell wall synthesis.cellulose synthesis; major CHO metabolism.synthesis.sucrose; major CHO metabolism.synthesis.starch; calvin cycle; glycolysis; OPP.oxidative PP' M '1.4' 'PS.reductive PP' '' '' '1.5' 'PS.carbon concentrating mechanism' '' '' '1.5.1' 'PS.carbon concentrating mechanism.C4' '' '' '1.5.2' 'PS.carbon concentrating mechanism.CAM' '' '' '1.5.3' 'PS.carbon concentrating mechanism.algal' '' '' '2' 'major CHO metabolism' '' '' '2.1' 'major CHO metabolism.synthesis' '' '' '2.1.1' 'major CHO metabolism.synthesis.sucrose' '' '' '2.1.1.1' 'major CHO metabolism.synthesis.sucrose.SPS' 'nbv0.3scaffold108520_1-1397' '(at4g10120 : 125.0) Encodes a protein with putative sucrose-phosphate synthase activity.; ATSPS4F; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, sucrose metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose synthase (InterPro:IPR000368), Sucrose phosphate synthase, plant (InterPro:IPR012819), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose phosphate synthase 3F (TAIR:AT1G04920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p31928|sps_spiol : 82.4) Sucrose-phosphate synthase (EC 2.4.1.14) (UDP-glucose-fructose-phosphate glucosyltransferase) - Spinacia oleracea (Spinach) & (reliability: 250.0) & (original description: Putative sps, Description = Putative sucrose-phosphate synthase 4, PFAM = )' T '2.1.1.1' 'major CHO metabolism.synthesis.sucrose.SPS' 'niben101scf02024_261065-269823' '(at1g04920 : 1561.0) Encodes a protein with putative sucrose-phosphate synthase activity.; sucrose phosphate synthase 3F (SPS3F); FUNCTIONS IN: sucrose-phosphate synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, sucrose metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose synthase (InterPro:IPR000368), Sucrose phosphate synthase, plant (InterPro:IPR012819), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose phosphate synthase 1F (TAIR:AT5G20280.1); Has 8635 Blast hits to 8489 proteins in 1558 species: Archae - 393; Bacteria - 5603; Metazoa - 16; Fungi - 85; Plants - 793; Viruses - 0; Other Eukaryotes - 1745 (source: NCBI BLink). & (p31927|sps_maize : 1458.0) Sucrose-phosphate synthase (EC 2.4.1.14) (UDP-glucose-fructose-phosphate glucosyltransferase) - Zea mays (Maize) & (gnl|cdd|36071 : 370.0) no description available & (gnl|cdd|30787 : 102.0) no description available & (reliability: 3122.0) & (original description: Putative SPS2, Description = Probable sucrose-phosphate synthase 2, PFAM = PF00862;PF05116;PF00534)' T '2.1.1.1' 'major CHO metabolism.synthesis.sucrose.SPS' 'niben101scf06678_206281-220551' '(q43845|sps_soltu : 1983.0) Sucrose-phosphate synthase (EC 2.4.1.14) (UDP-glucose-fructose-phosphate glucosyltransferase) - Solanum tuberosum (Potato) & (at5g20280 : 1558.0) Encodes a protein with putative sucrose-phosphate synthase activity. When the gene was expressed in transgenic tobacco plants, a clear trend for increased SPS activity was noted.; sucrose phosphate synthase 1F (SPS1F); FUNCTIONS IN: sucrose-phosphate synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, sucrose metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose phosphate synthase, plant (InterPro:IPR012819), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose phosphate synthase 2F (TAIR:AT5G11110.1); Has 9301 Blast hits to 9184 proteins in 1618 species: Archae - 405; Bacteria - 6026; Metazoa - 10; Fungi - 80; Plants - 739; Viruses - 0; Other Eukaryotes - 2041 (source: NCBI BLink). & (gnl|cdd|36071 : 383.0) no description available & (gnl|cdd|30787 : 97.4) no description available & (reliability: 3116.0) & (original description: Putative SPS, Description = Probable sucrose-phosphate synthase, PFAM = PF00534;PF00862;PF05116)' T '2.1.1.1' 'major CHO metabolism.synthesis.sucrose.SPS' 'niben101scf10492_149113-157938' '(q43845|sps_soltu : 1392.0) Sucrose-phosphate synthase (EC 2.4.1.14) (UDP-glucose-fructose-phosphate glucosyltransferase) - Solanum tuberosum (Potato) & (at5g11110 : 1318.0) Encodes a protein with putative sucrose-phosphate synthase activity.Involved in pollen exine formation.; sucrose phosphate synthase 2F (SPS2F); FUNCTIONS IN: sucrose-phosphate synthase activity; INVOLVED IN: biosynthetic process, sucrose metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose synthase (InterPro:IPR000368), Sucrose phosphate synthase, plant (InterPro:IPR012819), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose phosphate synthase 1F (TAIR:AT5G20280.1); Has 7063 Blast hits to 6941 proteins in 1362 species: Archae - 321; Bacteria - 4772; Metazoa - 8; Fungi - 55; Plants - 761; Viruses - 0; Other Eukaryotes - 1146 (source: NCBI BLink). & (gnl|cdd|36071 : 360.0) no description available & (gnl|cdd|30787 : 94.7) no description available & (reliability: 2636.0) & (original description: Putative SPS1, Description = Probable sucrose-phosphate synthase 1, PFAM = PF05116;PF00534;PF00862)' T '2.1.1.1' 'major CHO metabolism.synthesis.sucrose.SPS' 'niben101scf12754_1289-11965' '(q43845|sps_soltu : 1956.0) Sucrose-phosphate synthase (EC 2.4.1.14) (UDP-glucose-fructose-phosphate glucosyltransferase) - Solanum tuberosum (Potato) & (at5g20280 : 1549.0) Encodes a protein with putative sucrose-phosphate synthase activity. When the gene was expressed in transgenic tobacco plants, a clear trend for increased SPS activity was noted.; sucrose phosphate synthase 1F (SPS1F); FUNCTIONS IN: sucrose-phosphate synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, sucrose metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose phosphate synthase, plant (InterPro:IPR012819), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose phosphate synthase 2F (TAIR:AT5G11110.1); Has 9301 Blast hits to 9184 proteins in 1618 species: Archae - 405; Bacteria - 6026; Metazoa - 10; Fungi - 80; Plants - 739; Viruses - 0; Other Eukaryotes - 2041 (source: NCBI BLink). & (gnl|cdd|36071 : 381.0) no description available & (gnl|cdd|30787 : 97.4) no description available & (reliability: 3098.0) & (original description: Putative SPS, Description = Probable sucrose-phosphate synthase, PFAM = PF00862;PF05116;PF00534)' T '2.1.1.1' 'major CHO metabolism.synthesis.sucrose.SPS' 'niben101scf18156_18602-28259' '(at4g10120 : 1335.0) Encodes a protein with putative sucrose-phosphate synthase activity.; ATSPS4F; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, sucrose metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose synthase (InterPro:IPR000368), Sucrose phosphate synthase, plant (InterPro:IPR012819), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose phosphate synthase 3F (TAIR:AT1G04920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p31927|sps_maize : 1082.0) Sucrose-phosphate synthase (EC 2.4.1.14) (UDP-glucose-fructose-phosphate glucosyltransferase) - Zea mays (Maize) & (gnl|cdd|36071 : 339.0) no description available & (gnl|cdd|30787 : 103.0) no description available & (reliability: 2670.0) & (original description: Putative sps, Description = Sucrose-phosphate synthase, PFAM = PF00534;PF05116;PF00862)' T '2.1.1.2' 'major CHO metabolism.synthesis.sucrose.SPP' 'nbv0.3scaffold6112_18692-24348' '(at2g35840 : 633.0) Sucrose-6F-phosphate phosphohydrolase family protein; FUNCTIONS IN: phosphatase activity, magnesium ion binding, sucrose-phosphatase activity, catalytic activity; INVOLVED IN: sucrose biosynthetic process; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose-6-phosphate phosphohydrolase C-terminal (InterPro:IPR013679), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Sucrose phosphatase, plant/cyanobacteria (InterPro:IPR012847), Sucrose-phosphate phosphatase (InterPro:IPR006378); BEST Arabidopsis thaliana protein match is: sucrose-phosphatase 1 (TAIR:AT1G51420.1). & (gnl|cdd|86792 : 376.0) no description available & (reliability: 1266.0) & (original description: Putative SPP2, Description = Sucrose-phosphatase 2, PFAM = PF08472;PF05116)' T '2.1.1.2' 'major CHO metabolism.synthesis.sucrose.SPP' 'nbv0.3scaffold13444_6294-18238' '(at2g35840 : 466.0) Sucrose-6F-phosphate phosphohydrolase family protein; FUNCTIONS IN: phosphatase activity, magnesium ion binding, sucrose-phosphatase activity, catalytic activity; INVOLVED IN: sucrose biosynthetic process; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose-6-phosphate phosphohydrolase C-terminal (InterPro:IPR013679), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Sucrose phosphatase, plant/cyanobacteria (InterPro:IPR012847), Sucrose-phosphate phosphatase (InterPro:IPR006378); BEST Arabidopsis thaliana protein match is: sucrose-phosphatase 1 (TAIR:AT1G51420.1). & (gnl|cdd|86792 : 248.0) no description available & (reliability: 932.0) & (original description: Putative SPP1, Description = Sucrose-phosphatase 1, PFAM = PF08472;PF05116)' T '2.1.1.2' 'major CHO metabolism.synthesis.sucrose.SPP' 'niben044scf00006643ctg011_1756-7578' '(at2g35840 : 593.0) Sucrose-6F-phosphate phosphohydrolase family protein; FUNCTIONS IN: phosphatase activity, magnesium ion binding, sucrose-phosphatase activity, catalytic activity; INVOLVED IN: sucrose biosynthetic process; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose-6-phosphate phosphohydrolase C-terminal (InterPro:IPR013679), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Sucrose phosphatase, plant/cyanobacteria (InterPro:IPR012847), Sucrose-phosphate phosphatase (InterPro:IPR006378); BEST Arabidopsis thaliana protein match is: sucrose-phosphatase 1 (TAIR:AT1G51420.1). & (gnl|cdd|86792 : 335.0) no description available & (reliability: 1186.0) & (original description: Putative SPP1, Description = Sucrose-phosphatase 1, PFAM = PF05116;PF08472)' T '2.1.1.2' 'major CHO metabolism.synthesis.sucrose.SPP' 'niben101scf00911_357883-364155' '(at2g35840 : 630.0) Sucrose-6F-phosphate phosphohydrolase family protein; FUNCTIONS IN: phosphatase activity, magnesium ion binding, sucrose-phosphatase activity, catalytic activity; INVOLVED IN: sucrose biosynthetic process; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose-6-phosphate phosphohydrolase C-terminal (InterPro:IPR013679), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Sucrose phosphatase, plant/cyanobacteria (InterPro:IPR012847), Sucrose-phosphate phosphatase (InterPro:IPR006378); BEST Arabidopsis thaliana protein match is: sucrose-phosphatase 1 (TAIR:AT1G51420.1). & (gnl|cdd|86792 : 371.0) no description available & (reliability: 1260.0) & (original description: Putative SPP2, Description = Sucrose-phosphatase 2, PFAM = PF05116;PF08472)' T '2.1.1.2' 'major CHO metabolism.synthesis.sucrose.SPP' 'niben101scf01284_193019-207173' '(at2g35840 : 638.0) Sucrose-6F-phosphate phosphohydrolase family protein; FUNCTIONS IN: phosphatase activity, magnesium ion binding, sucrose-phosphatase activity, catalytic activity; INVOLVED IN: sucrose biosynthetic process; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose-6-phosphate phosphohydrolase C-terminal (InterPro:IPR013679), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Sucrose phosphatase, plant/cyanobacteria (InterPro:IPR012847), Sucrose-phosphate phosphatase (InterPro:IPR006378); BEST Arabidopsis thaliana protein match is: sucrose-phosphatase 1 (TAIR:AT1G51420.1). & (gnl|cdd|86792 : 375.0) no description available & (reliability: 1276.0) & (original description: Putative SPP1, Description = Sucrose-phosphatase 1, PFAM = PF05116;PF08472)' T '2.1.1.3' 'major CHO metabolism.synthesis.sucrose.FBPase' 'nbv0.3scaffold13674_1-5672' '(p46276|f16p2_soltu : 658.0) Fructose-1,6-bisphosphatase, cytosolic (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) (CY-F1) - Solanum tuberosum (Potato) & (at1g43670 : 595.0) Inositol monophosphatase family protein; FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: carbohydrate metabolic process, fructose metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: high cyclic electron flow 1 (TAIR:AT3G54050.2); Has 3746 Blast hits to 3738 proteins in 1274 species: Archae - 47; Bacteria - 2330; Metazoa - 401; Fungi - 156; Plants - 330; Viruses - 0; Other Eukaryotes - 482 (source: NCBI BLink). & (gnl|cdd|36671 : 528.0) no description available & (gnl|cdd|30130 : 495.0) no description available & (reliability: 1190.0) & (original description: Putative fbp, Description = Fructose-1,6-bisphosphatase, cytosolic, PFAM = PF00316)' T '2.1.1.3' 'major CHO metabolism.synthesis.sucrose.FBPase' 'niben101scf01150_386235-393068' '(p46276|f16p2_soltu : 654.0) Fructose-1,6-bisphosphatase, cytosolic (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) (CY-F1) - Solanum tuberosum (Potato) & (at1g43670 : 595.0) Inositol monophosphatase family protein; FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: carbohydrate metabolic process, fructose metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: high cyclic electron flow 1 (TAIR:AT3G54050.2); Has 3746 Blast hits to 3738 proteins in 1274 species: Archae - 47; Bacteria - 2330; Metazoa - 401; Fungi - 156; Plants - 330; Viruses - 0; Other Eukaryotes - 482 (source: NCBI BLink). & (gnl|cdd|36671 : 528.0) no description available & (gnl|cdd|30130 : 494.0) no description available & (reliability: 1190.0) & (original description: Putative fbp, Description = Fructose-1,6-bisphosphatase, cytosolic, PFAM = PF00316)' T '2.1.1.3' 'major CHO metabolism.synthesis.sucrose.FBPase' 'niben101scf02361_952490-961505' '(p46276|f16p2_soltu : 643.0) Fructose-1,6-bisphosphatase, cytosolic (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) (CY-F1) - Solanum tuberosum (Potato) & (at1g43670 : 606.0) Inositol monophosphatase family protein; FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: carbohydrate metabolic process, fructose metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: high cyclic electron flow 1 (TAIR:AT3G54050.2); Has 3746 Blast hits to 3738 proteins in 1274 species: Archae - 47; Bacteria - 2330; Metazoa - 401; Fungi - 156; Plants - 330; Viruses - 0; Other Eukaryotes - 482 (source: NCBI BLink). & (gnl|cdd|36671 : 528.0) no description available & (gnl|cdd|30130 : 494.0) no description available & (reliability: 1212.0) & (original description: Putative fbp, Description = Fructose-1,6-bisphosphatase, cytosolic, PFAM = PF00316)' T '2.1.1.1001' 'major CHO metabolism.synthesis.sucrose' 'fructose-6-p' 'cell wall synthesis.cellulose synthesis; major CHO metabolism.synthesis.sucrose; major CHO metabolism.synthesis.starch; glycolysis; OPP.oxidative PP' M '2.1.1.1002' 'major CHO metabolism.synthesis.sucrose' 'glucose-6-p' 'cell wall synthesis.cellulose synthesis; major CHO metabolism.synthesis.sucrose; major CHO metabolism.synthesis.starch; glycolysis; OPP.oxidative PP' M '2.1.1.1003' 'major CHO metabolism.synthesis.sucrose' 'glucose-1-p' 'cell wall synthesis.cellulose synthesis; major CHO metabolism.synthesis.sucrose; major CHO metabolism.synthesis.starch' M '2.1.1.1004' 'major CHO metabolism.synthesis.sucrose' 'glucose-1,6-bisp' 'cell wall synthesis.cellulose synthesis; major CHO metabolism.synthesis.sucrose; major CHO metabolism.synthesis.starch' M '2.1.1.1005' 'major CHO metabolism.synthesis.sucrose' 'fructose-2,6-bisp' 'major CHO metabolism.synthesis.sucrose' M '2.1.1.1006' 'major CHO metabolism.synthesis.sucrose' 'udp-glucose' 'cell wall synthesis.cellulose synthesis; major CHO metabolism.synthesis.sucrose' M '2.1.1.1007' 'major CHO metabolism.synthesis.sucrose' 'sucrose-6-p' 'major CHO metabolism.synthesis.sucrose' M '2.1.1.1008' 'major CHO metabolism.synthesis.sucrose' 'sucrose' 'major CHO metabolism.synthesis.sucrose; major CHO metabolism.degradation.sucrose' M '2.1.2' 'major CHO metabolism.synthesis.starch' 'niben101scf01191_160628-165590' '(at1g54940 : 478.0) plant glycogenin-like starch initiation protein 4 (PGSIP4); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 5 (TAIR:AT1G08990.1); Has 1335 Blast hits to 1329 proteins in 289 species: Archae - 0; Bacteria - 103; Metazoa - 257; Fungi - 309; Plants - 506; Viruses - 75; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|37161 : 207.0) no description available & (gnl|cdd|85496 : 118.0) no description available & (reliability: 956.0) & (original description: Putative GUX4, Description = Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4, PFAM = PF01501)' T '2.1.2' 'major CHO metabolism.synthesis.starch' 'niben101scf02724_636591-649804' '(at5g18480 : 578.0) plant glycogenin-like starch initiation protein 6 (PGSIP6); FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process, biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 5 (TAIR:AT1G08990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85496 : 97.7) no description available & (reliability: 1156.0) & (original description: Putative IPUT1, Description = Inositol phosphorylceramide glucuronosyltransferase 1, PFAM = PF01501)' T '2.1.2' 'major CHO metabolism.synthesis.starch' 'niben101scf03435_247584-257049' '(at5g18480 : 632.0) plant glycogenin-like starch initiation protein 6 (PGSIP6); FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process, biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 5 (TAIR:AT1G08990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85496 : 95.0) no description available & (reliability: 1264.0) & (original description: Putative IPUT1, Description = Inositol phosphorylceramide glucuronosyltransferase 1, PFAM = PF01501)' T '2.1.2' 'major CHO metabolism.synthesis.starch' 'niben101scf04332_5376-14260' '(at5g18480 : 631.0) plant glycogenin-like starch initiation protein 6 (PGSIP6); FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process, biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 5 (TAIR:AT1G08990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85496 : 93.9) no description available & (reliability: 1262.0) & (original description: Putative PGSIP6, Description = Hexosyltransferase, PFAM = PF01501)' T '2.1.2' 'major CHO metabolism.synthesis.starch' 'niben101scf09127_101260-105762' '(at1g54940 : 496.0) plant glycogenin-like starch initiation protein 4 (PGSIP4); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 5 (TAIR:AT1G08990.1); Has 1335 Blast hits to 1329 proteins in 289 species: Archae - 0; Bacteria - 103; Metazoa - 257; Fungi - 309; Plants - 506; Viruses - 75; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|37161 : 208.0) no description available & (gnl|cdd|85496 : 117.0) no description available & (reliability: 992.0) & (original description: Putative GUX4, Description = Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4, PFAM = PF01501)' T '2.1.2' 'major CHO metabolism.synthesis.starch' 'niben101scf09127_105381-110218' '(at1g54940 : 501.0) plant glycogenin-like starch initiation protein 4 (PGSIP4); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 5 (TAIR:AT1G08990.1); Has 1335 Blast hits to 1329 proteins in 289 species: Archae - 0; Bacteria - 103; Metazoa - 257; Fungi - 309; Plants - 506; Viruses - 75; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|37161 : 211.0) no description available & (gnl|cdd|85496 : 124.0) no description available & (reliability: 1002.0) & (original description: Putative GUX4, Description = Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4, PFAM = PF01501)' T '2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'nbv0.3scaffold4577_26072-33185' '(at1g74910 : 712.0) ADP-glucose pyrophosphorylase family protein; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP-glucose pyrophosphorylase family protein (TAIR:AT2G04650.1); Has 8747 Blast hits to 8740 proteins in 1996 species: Archae - 635; Bacteria - 5603; Metazoa - 382; Fungi - 295; Plants - 426; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (gnl|cdd|36673 : 631.0) no description available & (gnl|cdd|31401 : 187.0) no description available & (reliability: 1424.0) & (original description: Putative mpgB, Description = Mannose-1-phosphate guanylyltransferase, PFAM = PF00132;PF00483)' T '2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'nbv0.3scaffold10337_21622-30196' '(at1g74910 : 612.0) ADP-glucose pyrophosphorylase family protein; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP-glucose pyrophosphorylase family protein (TAIR:AT2G04650.1); Has 8747 Blast hits to 8740 proteins in 1996 species: Archae - 635; Bacteria - 5603; Metazoa - 382; Fungi - 295; Plants - 426; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (gnl|cdd|36673 : 562.0) no description available & (gnl|cdd|31401 : 198.0) no description available & (reliability: 1224.0) & (original description: Putative GMPPA, Description = Mannose-1-phosphate guanyltransferase alpha, PFAM = PF00483;PF00132)' T '2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'nbv0.5scaffold32_1421574-1471725' '(at1g74910 : 637.0) ADP-glucose pyrophosphorylase family protein; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP-glucose pyrophosphorylase family protein (TAIR:AT2G04650.1); Has 8747 Blast hits to 8740 proteins in 1996 species: Archae - 635; Bacteria - 5603; Metazoa - 382; Fungi - 295; Plants - 426; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (gnl|cdd|36673 : 570.0) no description available & (gnl|cdd|31401 : 189.0) no description available & (reliability: 1274.0) & (original description: Putative gmppA, Description = Mannose-1-phosphate guanyltransferase alpha, PFAM = PF00483;PF00132)' T '2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'nbv0.5scaffold6282_79705-86046' '(q00081|glgl1_soltu : 812.0) Glucose-1-phosphate adenylyltransferase large subunit 1 (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) (Fragment) - Solanum tuberosum (Potato) & (at4g39210 : 713.0) Encodes the large subunit of ADP-Glucose Pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL3 is the major large subunit isoform present in inflorescences, fruits and roots.; APL3; CONTAINS InterPro DOMAIN/s: Glucose-1-phosphate adenylyltransferase (InterPro:IPR011831), ADP-glucose pyrophosphorylase, conserved site (InterPro:IPR005836), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT2G21590.2); Has 8453 Blast hits to 8443 proteins in 1715 species: Archae - 406; Bacteria - 5407; Metazoa - 11; Fungi - 12; Plants - 1700; Viruses - 0; Other Eukaryotes - 917 (source: NCBI BLink). & (gnl|cdd|81051 : 557.0) no description available & (gnl|cdd|36536 : 397.0) no description available & (reliability: 1426.0) & (original description: Putative AGPS1, Description = Glucose-1-phosphate adenylyltransferase large subunit 1, PFAM = PF00483)' T '2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'niben044scf00005571ctg000_25291-39536' '(at1g74910 : 637.0) ADP-glucose pyrophosphorylase family protein; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP-glucose pyrophosphorylase family protein (TAIR:AT2G04650.1); Has 8747 Blast hits to 8740 proteins in 1996 species: Archae - 635; Bacteria - 5603; Metazoa - 382; Fungi - 295; Plants - 426; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (gnl|cdd|36673 : 568.0) no description available & (gnl|cdd|31401 : 187.0) no description available & (reliability: 1274.0) & (original description: Putative GMPPA, Description = Mannose-1-phosphate guanyltransferase alpha, PFAM = PF00483;PF00132)' T '2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'niben044scf00011082ctg000_1-7212' '(p55242|glgl2_soltu : 891.0) Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplast precursor (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) - Solanum tuberosum (Potato & (at1g27680 : 749.0) ADP-glucose pyrophosphorylase catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms of the large subunit (ApL1-4) have been described.Mutational analysis of APS1 suggests that APL1 and APL2 can compensate for loss of APS1 catalytic activity,suggesting both have catalytic as well as regulatory functions.; ADPGLC-PPase large subunit (APL2); CONTAINS InterPro DOMAIN/s: Glucose-1-phosphate adenylyltransferase (InterPro:IPR011831), ADP-glucose pyrophosphorylase, conserved site (InterPro:IPR005836), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT4G39210.1); Has 11860 Blast hits to 11712 proteins in 2161 species: Archae - 516; Bacteria - 8154; Metazoa - 62; Fungi - 36; Plants - 1704; Viruses - 0; Other Eukaryotes - 1388 (source: NCBI BLink). & (gnl|cdd|81051 : 634.0) no description available & (gnl|cdd|36536 : 436.0) no description available & (reliability: 1498.0) & (original description: Putative AGPS2, Description = Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic, PFAM = PF00483)' T '2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'niben044scf00018336ctg007_6013-12428' '(q00081|glgl1_soltu : 878.0) Glucose-1-phosphate adenylyltransferase large subunit 1 (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) (Fragment) - Solanum tuberosum (Potato) & (at4g39210 : 790.0) Encodes the large subunit of ADP-Glucose Pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL3 is the major large subunit isoform present in inflorescences, fruits and roots.; APL3; CONTAINS InterPro DOMAIN/s: Glucose-1-phosphate adenylyltransferase (InterPro:IPR011831), ADP-glucose pyrophosphorylase, conserved site (InterPro:IPR005836), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT2G21590.2); Has 8453 Blast hits to 8443 proteins in 1715 species: Archae - 406; Bacteria - 5407; Metazoa - 11; Fungi - 12; Plants - 1700; Viruses - 0; Other Eukaryotes - 917 (source: NCBI BLink). & (gnl|cdd|81051 : 615.0) no description available & (gnl|cdd|36536 : 433.0) no description available & (reliability: 1580.0) & (original description: Putative AGPS1, Description = Glucose-1-phosphate adenylyltransferase large subunit 1, PFAM = PF00483)' T '2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'niben101scf00168_147536-152859' '(at1g05610 : 475.0) Encodes the small subunit of ADP-glucose pyrophosphorylase. The small subunit is the catalytic isoform responsible for ADP-glucose pyrophosphorylase activity. The presence of the small subunit is required for large subunit stability. Two isoforms of the small subunit (ApS1 and ApS2) have been described. ApS2 is a minor small subunit isoform present in all plant tissues tested.; ADP-glucose pyrophosphorylase small subunit 2 (APS2); FUNCTIONS IN: transferase activity, glucose-1-phosphate adenylyltransferase activity, nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ADP-glucose pyrophosphorylase, conserved site (InterPro:IPR005836), Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP glucose pyrophosphorylase 1 (TAIR:AT5G48300.1); Has 7131 Blast hits to 7129 proteins in 1626 species: Archae - 269; Bacteria - 4720; Metazoa - 15; Fungi - 23; Plants - 1553; Viruses - 0; Other Eukaryotes - 551 (source: NCBI BLink). & (gnl|cdd|81051 : 442.0) no description available & (p52416|glgs1_vicfa : 423.0) Glucose-1-phosphate adenylyltransferase small subunit 1, chloroplast precursor (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase B) (Alpha-D-glucose-1-phosphate adenyl transferase) - Vicia faba (Broad bean) & (gnl|cdd|36536 : 302.0) no description available & (reliability: 950.0) & (original description: Putative APS2, Description = Inactive glucose-1-phosphate adenylyltransferase small subunit 2, chloroplastic, PFAM = PF00483)' T '2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'niben101scf00202_186046-192461' '(q00081|glgl1_soltu : 872.0) Glucose-1-phosphate adenylyltransferase large subunit 1 (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) (Fragment) - Solanum tuberosum (Potato) & (at4g39210 : 783.0) Encodes the large subunit of ADP-Glucose Pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL3 is the major large subunit isoform present in inflorescences, fruits and roots.; APL3; CONTAINS InterPro DOMAIN/s: Glucose-1-phosphate adenylyltransferase (InterPro:IPR011831), ADP-glucose pyrophosphorylase, conserved site (InterPro:IPR005836), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT2G21590.2); Has 8453 Blast hits to 8443 proteins in 1715 species: Archae - 406; Bacteria - 5407; Metazoa - 11; Fungi - 12; Plants - 1700; Viruses - 0; Other Eukaryotes - 917 (source: NCBI BLink). & (gnl|cdd|81051 : 613.0) no description available & (gnl|cdd|36536 : 433.0) no description available & (reliability: 1566.0) & (original description: Putative AGPS1, Description = Glucose-1-phosphate adenylyltransferase large subunit 1, PFAM = PF00483)' T '2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'niben101scf00339_288570-306635' '(at1g74910 : 678.0) ADP-glucose pyrophosphorylase family protein; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP-glucose pyrophosphorylase family protein (TAIR:AT2G04650.1); Has 8747 Blast hits to 8740 proteins in 1996 species: Archae - 635; Bacteria - 5603; Metazoa - 382; Fungi - 295; Plants - 426; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (gnl|cdd|36673 : 610.0) no description available & (gnl|cdd|31401 : 191.0) no description available & (reliability: 1356.0) & (original description: Putative gmppA, Description = Mannose-1-phosphate guanyltransferase alpha, PFAM = PF00132;PF00483)' T '2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'niben101scf01520_987134-993788' '(p55243|glgl3_soltu : 908.0) Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplast precursor (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) - Solanum tuberosum (Potato & (at5g19220 : 865.0) Encodes the large subunit of ADP-glucose pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL1 is the major large subunit isoform present in leaves. Mutational analysis of APS1 suggests that APL1 and APL2 can compensate for loss of APS1 catalytic activity,suggesting both have catalytic as well as regulatory functions.; ADP glucose pyrophosphorylase large subunit 1 (APL1); FUNCTIONS IN: glucose-1-phosphate adenylyltransferase activity; INVOLVED IN: cellulose biosynthetic process, biosynthetic process, glycogen biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-1-phosphate adenylyltransferase (InterPro:IPR011831), ADP-glucose pyrophosphorylase, conserved site (InterPro:IPR005836), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADPGLC-PPase large subunit (TAIR:AT1G27680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81051 : 650.0) no description available & (gnl|cdd|36536 : 438.0) no description available & (reliability: 1730.0) & (original description: Putative AGPS3, Description = Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic, PFAM = PF00483)' T '2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'niben101scf01625_168805-175387' '(p23509|glgs_soltu : 949.0) Glucose-1-phosphate adenylyltransferase small subunit, chloroplast precursor (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase B) (Alpha-D-glucose-1-phosphate adenyl transferase) - Solanum tuberosum (Potato) & (at5g48300 : 884.0) Encodes the small subunit of ADP-glucose pyrophosphorylase. The small subunit is the catalytic isoform responsible for ADP-glucose pyrophosphorylase activity. The presence of the small subunit is required for large subunit stability. Two isoforms of the small subunit (ApS1 and ApS2) have been described. ApS1 is the major small subunit isoform present in all plant tissues tested.; ADP glucose pyrophosphorylase 1 (ADG1); FUNCTIONS IN: glucose-1-phosphate adenylyltransferase activity; INVOLVED IN: photoperiodism, flowering, starch biosynthetic process; LOCATED IN: heterotetrameric ADPG pyrophosphorylase complex, apoplast, chloroplast, chloroplast stroma; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-1-phosphate adenylyltransferase (InterPro:IPR011831), ADP-glucose pyrophosphorylase, conserved site (InterPro:IPR005836), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP glucose pyrophosphorylase large subunit 1 (TAIR:AT5G19220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81051 : 690.0) no description available & (gnl|cdd|36536 : 434.0) no description available & (reliability: 1768.0) & (original description: Putative agp, Description = ADP-glucose pyrophosphorylase, PFAM = PF00483)' T '2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'niben101scf02253_1193576-1203242' '(at1g74910 : 715.0) ADP-glucose pyrophosphorylase family protein; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP-glucose pyrophosphorylase family protein (TAIR:AT2G04650.1); Has 8747 Blast hits to 8740 proteins in 1996 species: Archae - 635; Bacteria - 5603; Metazoa - 382; Fungi - 295; Plants - 426; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (gnl|cdd|36673 : 620.0) no description available & (gnl|cdd|31401 : 191.0) no description available & (reliability: 1430.0) & (original description: Putative gmppA, Description = Mannose-1-phosphate guanyltransferase alpha, PFAM = PF00132;PF00483)' T '2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'niben101scf03671_22979-29764' '(p55243|glgl3_soltu : 906.0) Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplast precursor (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) - Solanum tuberosum (Potato & (at5g19220 : 867.0) Encodes the large subunit of ADP-glucose pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL1 is the major large subunit isoform present in leaves. Mutational analysis of APS1 suggests that APL1 and APL2 can compensate for loss of APS1 catalytic activity,suggesting both have catalytic as well as regulatory functions.; ADP glucose pyrophosphorylase large subunit 1 (APL1); FUNCTIONS IN: glucose-1-phosphate adenylyltransferase activity; INVOLVED IN: cellulose biosynthetic process, biosynthetic process, glycogen biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-1-phosphate adenylyltransferase (InterPro:IPR011831), ADP-glucose pyrophosphorylase, conserved site (InterPro:IPR005836), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADPGLC-PPase large subunit (TAIR:AT1G27680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81051 : 655.0) no description available & (gnl|cdd|36536 : 441.0) no description available & (reliability: 1734.0) & (original description: Putative AGPS3, Description = Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic, PFAM = PF00483)' T '2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'niben101scf07984_232766-239116' '(p23509|glgs_soltu : 946.0) Glucose-1-phosphate adenylyltransferase small subunit, chloroplast precursor (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase B) (Alpha-D-glucose-1-phosphate adenyl transferase) - Solanum tuberosum (Potato) & (at5g48300 : 884.0) Encodes the small subunit of ADP-glucose pyrophosphorylase. The small subunit is the catalytic isoform responsible for ADP-glucose pyrophosphorylase activity. The presence of the small subunit is required for large subunit stability. Two isoforms of the small subunit (ApS1 and ApS2) have been described. ApS1 is the major small subunit isoform present in all plant tissues tested.; ADP glucose pyrophosphorylase 1 (ADG1); FUNCTIONS IN: glucose-1-phosphate adenylyltransferase activity; INVOLVED IN: photoperiodism, flowering, starch biosynthetic process; LOCATED IN: heterotetrameric ADPG pyrophosphorylase complex, apoplast, chloroplast, chloroplast stroma; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-1-phosphate adenylyltransferase (InterPro:IPR011831), ADP-glucose pyrophosphorylase, conserved site (InterPro:IPR005836), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP glucose pyrophosphorylase large subunit 1 (TAIR:AT5G19220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81051 : 689.0) no description available & (gnl|cdd|36536 : 434.0) no description available & (reliability: 1768.0) & (original description: Putative agp, Description = ADP-glucose pyrophosphorylase, PFAM = PF00483)' T '2.1.2.1' 'major CHO metabolism.synthesis.starch.AGPase' 'niben101scf16278_19155-26316' '(at1g74910 : 714.0) ADP-glucose pyrophosphorylase family protein; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP-glucose pyrophosphorylase family protein (TAIR:AT2G04650.1); Has 8747 Blast hits to 8740 proteins in 1996 species: Archae - 635; Bacteria - 5603; Metazoa - 382; Fungi - 295; Plants - 426; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (gnl|cdd|36673 : 631.0) no description available & (gnl|cdd|31401 : 185.0) no description available & (reliability: 1428.0) & (original description: Putative mpgB, Description = Mannose-1-phosphate guanylyltransferase, PFAM = PF00483;PF00132)' T '2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'nbv0.3scaffold3325_3875-22159' '(at5g65685 : 491.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: starch synthase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Starch synthase, catalytic domain (InterPro:IPR013534); BEST Arabidopsis thaliana protein match is: starch synthase 4 (TAIR:AT4G18240.1). & (gnl|cdd|80717 : 262.0) no description available & (q43846|ssy3_soltu : 191.0) Soluble starch synthase 3, chloroplast precursor (EC 2.4.1.21) (SS III) (Soluble starch synthase III) - Solanum tuberosum (Potato) & (reliability: 982.0) & (original description: Putative SSV, Description = Soluble starch synthase V, PFAM = PF08323)' T '2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'nbv0.5scaffold1183_102510-112541' '(q00775|ssg1_soltu : 1070.0) Granule-bound starch synthase 1, chloroplast precursor (EC 2.4.1.242) (Granule-bound starch synthase I) (GBSS-I) - Solanum tuberosum (Potato) & (at1g32900 : 883.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: protein binding, transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, glucan biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 2 (TAIR:AT3G01180.1); Has 13950 Blast hits to 13932 proteins in 3602 species: Archae - 351; Bacteria - 6813; Metazoa - 7; Fungi - 173; Plants - 5477; Viruses - 0; Other Eukaryotes - 1129 (source: NCBI BLink). & (gnl|cdd|80717 : 401.0) no description available & (reliability: 1766.0) & (original description: Putative WAXY, Description = Granule-bound starch synthase 1, chloroplastic/amyloplastic, PFAM = PF08323;PF00534)' T '2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'niben044scf00016941ctg012_40-3039' '(q43847|ssy2_soltu : 351.0) Granule-bound starch synthase 2, chloroplast precursor (EC 2.4.1.21) (Granule-bound starch synthase II) (SS II) (GBSS-II) - Solanum tuberosum (Potato) & (at3g01180 : 126.0) starch synthase 2 (SS2); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: cellulose biosynthetic process, glucan biosynthetic process, biosynthetic process, glycogen biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: Glycogen/starch synthases, ADP-glucose type (TAIR:AT5G24300.2); Has 15927 Blast hits to 11968 proteins in 3394 species: Archae - 233; Bacteria - 4788; Metazoa - 1175; Fungi - 1070; Plants - 4691; Viruses - 26; Other Eukaryotes - 3944 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative SS2, Description = Starch synthase, chloroplastic/amyloplastic, PFAM = )' T '2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'niben044scf00031641ctg002_5951-14480' '(p93568|ssy1_soltu : 836.0) Soluble starch synthase 1, chloroplast precursor (EC 2.4.1.21) (SS I) (Soluble starch synthase I) - Solanum tuberosum (Potato) & (at5g24300 : 726.0) SSI is a plastidial enzyme and crucial for the synthesis of normal amylopectin in the leaves of Arabidopsis. The absence of SSI results in a deficiency in the number of shorter glucans which in turn affect the formation and connection of the amylopectin clusters in starch.; SUPPRESSOR OF SALICYLIC ACID INSENSITIVITY 1 (SSI1); FUNCTIONS IN: transferase activity, transferring glycosyl groups, starch synthase activity; INVOLVED IN: amylopectin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 2 (TAIR:AT3G01180.1). & (gnl|cdd|80717 : 415.0) no description available & (reliability: 1452.0) & (original description: Putative glgA, Description = Glycogen synthase, PFAM = PF00534;PF08323)' T '2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'niben101scf00069_404672-424724' '(at5g65685 : 492.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: starch synthase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Starch synthase, catalytic domain (InterPro:IPR013534); BEST Arabidopsis thaliana protein match is: starch synthase 4 (TAIR:AT4G18240.1). & (gnl|cdd|80717 : 226.0) no description available & (q43846|ssy3_soltu : 157.0) Soluble starch synthase 3, chloroplast precursor (EC 2.4.1.21) (SS III) (Soluble starch synthase III) - Solanum tuberosum (Potato) & (reliability: 984.0) & (original description: Putative SSV, Description = Soluble starch synthase V, PFAM = PF08323)' T '2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'niben101scf01399_34547-60642' '(q43846|ssy3_soltu : 2088.0) Soluble starch synthase 3, chloroplast precursor (EC 2.4.1.21) (SS III) (Soluble starch synthase III) - Solanum tuberosum (Potato) & (at1g11720 : 1440.0) Encodes a starch synthase that in addition to its role in starch biosynthesis also has a negative regulatory function in the biosynthesis of transient starch. The protein apparently contains a starch-binding domain (SBD).; starch synthase 3 (SS3); CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296), Carbohydrate binding domain, family 25 (InterPro:IPR005085); BEST Arabidopsis thaliana protein match is: starch synthase 4 (TAIR:AT4G18240.1). & (gnl|cdd|80717 : 477.0) no description available & (reliability: 2880.0) & (original description: Putative SS3, Description = Soluble starch synthase 3, chloroplastic/amyloplastic, PFAM = PF16760;PF16760;PF16760;PF00534;PF08323)' T '2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'niben101scf02836_134210-154004' '(gnl|cdd|80717 : 459.0) no description available & (at4g18240 : 404.0) starch synthase 4 (SS4); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: starch metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 3 (TAIR:AT1G11720.1); Has 55451 Blast hits to 38117 proteins in 4040 species: Archae - 1014; Bacteria - 10985; Metazoa - 22418; Fungi - 3875; Plants - 6050; Viruses - 242; Other Eukaryotes - 10867 (source: NCBI BLink). & (q43846|ssy3_soltu : 315.0) Soluble starch synthase 3, chloroplast precursor (EC 2.4.1.21) (SS III) (Soluble starch synthase III) - Solanum tuberosum (Potato) & (reliability: 808.0) & (original description: Putative glgA, Description = Glycogen synthase, PFAM = PF00534;PF08323)' T '2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'niben101scf03455_108623-121557' '(at4g18240 : 861.0) starch synthase 4 (SS4); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: starch metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 3 (TAIR:AT1G11720.1); Has 55451 Blast hits to 38117 proteins in 4040 species: Archae - 1014; Bacteria - 10985; Metazoa - 22418; Fungi - 3875; Plants - 6050; Viruses - 242; Other Eukaryotes - 10867 (source: NCBI BLink). & (gnl|cdd|80717 : 542.0) no description available & (q43846|ssy3_soltu : 393.0) Soluble starch synthase 3, chloroplast precursor (EC 2.4.1.21) (SS III) (Soluble starch synthase III) - Solanum tuberosum (Potato) & (reliability: 1722.0) & (original description: Putative glgA, Description = Glycogen synthase, PFAM = PF00534;PF08323)' T '2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'niben101scf04083_81529-100017' '(p93568|ssy1_soltu : 1129.0) Soluble starch synthase 1, chloroplast precursor (EC 2.4.1.21) (SS I) (Soluble starch synthase I) - Solanum tuberosum (Potato) & (at5g24300 : 890.0) SSI is a plastidial enzyme and crucial for the synthesis of normal amylopectin in the leaves of Arabidopsis. The absence of SSI results in a deficiency in the number of shorter glucans which in turn affect the formation and connection of the amylopectin clusters in starch.; SUPPRESSOR OF SALICYLIC ACID INSENSITIVITY 1 (SSI1); FUNCTIONS IN: transferase activity, transferring glycosyl groups, starch synthase activity; INVOLVED IN: amylopectin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 2 (TAIR:AT3G01180.1). & (gnl|cdd|80717 : 481.0) no description available & (reliability: 1780.0) & (original description: Putative glgA, Description = Starch synthase, chloroplastic/amyloplastic, PFAM = PF00534;PF08323)' T '2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'niben101scf05060_473157-487242' '(q43847|ssy2_soltu : 648.0) Granule-bound starch synthase 2, chloroplast precursor (EC 2.4.1.21) (Granule-bound starch synthase II) (SS II) (GBSS-II) - Solanum tuberosum (Potato) & (at3g01180 : 586.0) starch synthase 2 (SS2); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: cellulose biosynthetic process, glucan biosynthetic process, biosynthetic process, glycogen biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: Glycogen/starch synthases, ADP-glucose type (TAIR:AT5G24300.2); Has 15927 Blast hits to 11968 proteins in 3394 species: Archae - 233; Bacteria - 4788; Metazoa - 1175; Fungi - 1070; Plants - 4691; Viruses - 26; Other Eukaryotes - 3944 (source: NCBI BLink). & (gnl|cdd|80717 : 361.0) no description available & (reliability: 1172.0) & (original description: Putative pvss22, Description = Starch synthase, chloroplastic/amyloplastic, PFAM = PF00534;PF08323;PF08323)' T '2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'niben101scf05154_118642-130039' '(p93568|ssy1_soltu : 1078.0) Soluble starch synthase 1, chloroplast precursor (EC 2.4.1.21) (SS I) (Soluble starch synthase I) - Solanum tuberosum (Potato) & (at5g24300 : 851.0) SSI is a plastidial enzyme and crucial for the synthesis of normal amylopectin in the leaves of Arabidopsis. The absence of SSI results in a deficiency in the number of shorter glucans which in turn affect the formation and connection of the amylopectin clusters in starch.; SUPPRESSOR OF SALICYLIC ACID INSENSITIVITY 1 (SSI1); FUNCTIONS IN: transferase activity, transferring glycosyl groups, starch synthase activity; INVOLVED IN: amylopectin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 2 (TAIR:AT3G01180.1). & (gnl|cdd|80717 : 467.0) no description available & (reliability: 1702.0) & (original description: Putative SS1, Description = Starch synthase isoform 1, PFAM = PF08323;PF00534)' T '2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'niben101scf07939_111492-122092' '(gnl|cdd|80717 : 274.0) no description available & (at4g18240 : 223.0) starch synthase 4 (SS4); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: starch metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 3 (TAIR:AT1G11720.1); Has 55451 Blast hits to 38117 proteins in 4040 species: Archae - 1014; Bacteria - 10985; Metazoa - 22418; Fungi - 3875; Plants - 6050; Viruses - 242; Other Eukaryotes - 10867 (source: NCBI BLink). & (q43846|ssy3_soltu : 167.0) Soluble starch synthase 3, chloroplast precursor (EC 2.4.1.21) (SS III) (Soluble starch synthase III) - Solanum tuberosum (Potato) & (reliability: 446.0) & (original description: Putative glgA, Description = Starch synthase, chloroplastic/amyloplastic, PFAM = PF08323)' T '2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'niben101scf07939_116508-124056' '(gnl|cdd|80717 : 316.0) no description available & (at4g18240 : 280.0) starch synthase 4 (SS4); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: starch metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 3 (TAIR:AT1G11720.1); Has 55451 Blast hits to 38117 proteins in 4040 species: Archae - 1014; Bacteria - 10985; Metazoa - 22418; Fungi - 3875; Plants - 6050; Viruses - 242; Other Eukaryotes - 10867 (source: NCBI BLink). & (q43846|ssy3_soltu : 218.0) Soluble starch synthase 3, chloroplast precursor (EC 2.4.1.21) (SS III) (Soluble starch synthase III) - Solanum tuberosum (Potato) & (reliability: 560.0) & (original description: Putative GLGA, Description = Starch synthase, chloroplastic/amyloplastic, PFAM = PF00534;PF08323)' T '2.1.2.2' 'major CHO metabolism.synthesis.starch.starch synthase' 'niben101scf21165_31872-38303' '(q00775|ssg1_soltu : 1110.0) Granule-bound starch synthase 1, chloroplast precursor (EC 2.4.1.242) (Granule-bound starch synthase I) (GBSS-I) - Solanum tuberosum (Potato) & (at1g32900 : 905.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: protein binding, transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, glucan biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 2 (TAIR:AT3G01180.1); Has 13950 Blast hits to 13932 proteins in 3602 species: Archae - 351; Bacteria - 6813; Metazoa - 7; Fungi - 173; Plants - 5477; Viruses - 0; Other Eukaryotes - 1129 (source: NCBI BLink). & (gnl|cdd|80717 : 405.0) no description available & (reliability: 1810.0) & (original description: Putative WAXY, Description = Granule-bound starch synthase 1, chloroplastic/amyloplastic, PFAM = PF00534;PF08323)' T '2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'nbv0.3scaffold29341_370-15342' '(at5g03650 : 202.0) Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves.; starch branching enzyme 2.2 (SBE2.2); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q08047|glgb_maize : 176.0) 1,4-alpha-glucan branching enzyme IIB, chloroplast precursor (EC 2.4.1.18) (Starch branching enzyme IIB) (Q-enzyme) - Zea mays (Maize) & (gnl|cdd|35691 : 116.0) no description available & (gnl|cdd|30341 : 99.6) no description available & (reliability: 404.0) & (original description: Putative ae1, Description = Starch branching enzyme II, PFAM = PF02922)' T '2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'nbv0.3scaffold34027_9988-18152' '(at2g36390 : 144.0) Encodes a starch branching enzyme (EC.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout plant tissues.; starch branching enzyme 2.1 (SBE2.1); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.2 (TAIR:AT5G03650.1); Has 15972 Blast hits to 15848 proteins in 2360 species: Archae - 125; Bacteria - 12355; Metazoa - 437; Fungi - 446; Plants - 1422; Viruses - 0; Other Eukaryotes - 1187 (source: NCBI BLink). & (q08047|glgb_maize : 118.0) 1,4-alpha-glucan branching enzyme IIB, chloroplast precursor (EC 2.4.1.18) (Starch branching enzyme IIB) (Q-enzyme) - Zea mays (Maize) & (reliability: 288.0) & (original description: Putative ae1, Description = Starch branching enzyme II, PFAM = )' T '2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'nbv0.5scaffold1447_33761-57317' '(at3g20440 : 1340.0) BE1 ia a putative glycoside hydrolase. It plays vital roles during embryogenesis and in carbohydrate metabolism. Mutation in BE1 has pleotrophic effect on the whole plant development.; EMBRYO DEFECTIVE 2729 (EMB2729); FUNCTIONS IN: cation binding, catalytic activity, alpha-amylase activity; INVOLVED IN: post-embryonic development, carbohydrate metabolic process, embryo development ending in seed dormancy; LOCATED IN: plastid; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycosyl hydrolase, family 13, subfamily, catalytic domain (InterPro:IPR006589), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1). & (gnl|cdd|35691 : 528.0) no description available & (p30924|glgb_soltu : 464.0) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Starch branching enzyme) (Q-enzyme) - Solanum tuberosum (Potato) & (gnl|cdd|30644 : 255.0) no description available & (reliability: 2680.0) & (original description: Putative SBE3, Description = 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic, PFAM = PF00128;PF02806;PF02922)' T '2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'nbv0.5scaffold1583_67979-102049' '(at5g03650 : 1303.0) Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves.; starch branching enzyme 2.2 (SBE2.2); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q08047|glgb_maize : 1227.0) 1,4-alpha-glucan branching enzyme IIB, chloroplast precursor (EC 2.4.1.18) (Starch branching enzyme IIB) (Q-enzyme) - Zea mays (Maize) & (gnl|cdd|35691 : 856.0) no description available & (gnl|cdd|30644 : 360.0) no description available & (reliability: 2606.0) & (original description: Putative GLC3, Description = 1,4-alpha-glucan-branching enzyme, PFAM = PF02922;PF00128;PF02806)' T '2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'nbv0.5scaffold3542_5882-11398' '(at3g20440 : 492.0) BE1 ia a putative glycoside hydrolase. It plays vital roles during embryogenesis and in carbohydrate metabolism. Mutation in BE1 has pleotrophic effect on the whole plant development.; EMBRYO DEFECTIVE 2729 (EMB2729); FUNCTIONS IN: cation binding, catalytic activity, alpha-amylase activity; INVOLVED IN: post-embryonic development, carbohydrate metabolic process, embryo development ending in seed dormancy; LOCATED IN: plastid; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycosyl hydrolase, family 13, subfamily, catalytic domain (InterPro:IPR006589), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1). & (gnl|cdd|35691 : 94.6) no description available & (reliability: 984.0) & (original description: Putative BE1, Description = Starch branching enzyme III, PFAM = PF02922)' T '2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'niben044scf00001618ctg008_469-20200' '(at3g20440 : 1207.0) BE1 ia a putative glycoside hydrolase. It plays vital roles during embryogenesis and in carbohydrate metabolism. Mutation in BE1 has pleotrophic effect on the whole plant development.; EMBRYO DEFECTIVE 2729 (EMB2729); FUNCTIONS IN: cation binding, catalytic activity, alpha-amylase activity; INVOLVED IN: post-embryonic development, carbohydrate metabolic process, embryo development ending in seed dormancy; LOCATED IN: plastid; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycosyl hydrolase, family 13, subfamily, catalytic domain (InterPro:IPR006589), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1). & (gnl|cdd|35691 : 469.0) no description available & (q08047|glgb_maize : 408.0) 1,4-alpha-glucan branching enzyme IIB, chloroplast precursor (EC 2.4.1.18) (Starch branching enzyme IIB) (Q-enzyme) - Zea mays (Maize) & (gnl|cdd|30644 : 225.0) no description available & (reliability: 2414.0) & (original description: Putative SBE3, Description = 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic, PFAM = PF02922;PF00128)' T '2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'niben044scf00039093ctg000_3009-7131' '(at5g03650 : 117.0) Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves.; starch branching enzyme 2.2 (SBE2.2); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q08047|glgb_maize : 98.6) 1,4-alpha-glucan branching enzyme IIB, chloroplast precursor (EC 2.4.1.18) (Starch branching enzyme IIB) (Q-enzyme) - Zea mays (Maize) & (reliability: 234.0) & (original description: Putative ae1, Description = 1,4-alpha-glucan-branching enzyme, PFAM = PF02922)' T '2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'niben044scf00041509ctg002_1347-3727' '(at5g03650 : 178.0) Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves.; starch branching enzyme 2.2 (SBE2.2); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q08047|glgb_maize : 171.0) 1,4-alpha-glucan branching enzyme IIB, chloroplast precursor (EC 2.4.1.18) (Starch branching enzyme IIB) (Q-enzyme) - Zea mays (Maize) & (gnl|cdd|35691 : 109.0) no description available & (reliability: 356.0) & (original description: Putative ae1, Description = 1,4-alpha-glucan-branching enzyme, PFAM = )' T '2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'niben101scf00311_9216-56011' '(at3g20440 : 1348.0) BE1 ia a putative glycoside hydrolase. It plays vital roles during embryogenesis and in carbohydrate metabolism. Mutation in BE1 has pleotrophic effect on the whole plant development.; EMBRYO DEFECTIVE 2729 (EMB2729); FUNCTIONS IN: cation binding, catalytic activity, alpha-amylase activity; INVOLVED IN: post-embryonic development, carbohydrate metabolic process, embryo development ending in seed dormancy; LOCATED IN: plastid; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycosyl hydrolase, family 13, subfamily, catalytic domain (InterPro:IPR006589), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1). & (gnl|cdd|35691 : 531.0) no description available & (p30924|glgb_soltu : 462.0) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Starch branching enzyme) (Q-enzyme) - Solanum tuberosum (Potato) & (gnl|cdd|30644 : 259.0) no description available & (reliability: 2696.0) & (original description: Putative SBE3, Description = 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic, PFAM = PF02922;PF02806;PF00128)' T '2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'niben101scf00712_1723612-1732650' '(p30924|glgb_soltu : 1411.0) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Starch branching enzyme) (Q-enzyme) - Solanum tuberosum (Potato) & (at5g03650 : 793.0) Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves.; starch branching enzyme 2.2 (SBE2.2); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35691 : 673.0) no description available & (gnl|cdd|30644 : 307.0) no description available & (reliability: 1586.0) & (original description: Putative SBE1, Description = 1,4-alpha-glucan-branching enzyme, PFAM = PF02922;PF02806;PF00128)' T '2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'niben101scf02897_165415-206715' '(at5g03650 : 1308.0) Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves.; starch branching enzyme 2.2 (SBE2.2); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q08047|glgb_maize : 1224.0) 1,4-alpha-glucan branching enzyme IIB, chloroplast precursor (EC 2.4.1.18) (Starch branching enzyme IIB) (Q-enzyme) - Zea mays (Maize) & (gnl|cdd|35691 : 854.0) no description available & (gnl|cdd|30644 : 358.0) no description available & (reliability: 2616.0) & (original description: Putative GBE1, Description = 1,4-alpha-glucan-branching enzyme, PFAM = PF02806;PF02922;PF00128)' T '2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'niben101scf03631_199123-208298' '(p30924|glgb_soltu : 1427.0) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Starch branching enzyme) (Q-enzyme) - Solanum tuberosum (Potato) & (at5g03650 : 804.0) Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves.; starch branching enzyme 2.2 (SBE2.2); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35691 : 668.0) no description available & (gnl|cdd|30644 : 306.0) no description available & (reliability: 1608.0) & (original description: Putative SBE1, Description = 1,4-alpha-glucan-branching enzyme, PFAM = PF00128;PF02922;PF02806)' T '2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'niben101scf05222_409456-412718' '(at5g03650 : 184.0) Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves.; starch branching enzyme 2.2 (SBE2.2); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q08047|glgb_maize : 152.0) 1,4-alpha-glucan branching enzyme IIB, chloroplast precursor (EC 2.4.1.18) (Starch branching enzyme IIB) (Q-enzyme) - Zea mays (Maize) & (gnl|cdd|35691 : 125.0) no description available & (reliability: 368.0) & (original description: Putative SBE2, Description = Starch branching enzyme 2, PFAM = PF02806)' T '2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'niben101scf05222_409753-456436' '(at5g03650 : 1319.0) Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves.; starch branching enzyme 2.2 (SBE2.2); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q08047|glgb_maize : 1228.0) 1,4-alpha-glucan branching enzyme IIB, chloroplast precursor (EC 2.4.1.18) (Starch branching enzyme IIB) (Q-enzyme) - Zea mays (Maize) & (gnl|cdd|35691 : 857.0) no description available & (gnl|cdd|30644 : 361.0) no description available & (reliability: 2638.0) & (original description: Putative SBEI, Description = 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic, PFAM = PF00128;PF02806;PF02922)' T '2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'niben101scf05222_433104-447154' '(at5g03650 : 206.0) Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves.; starch branching enzyme 2.2 (SBE2.2); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q08047|glgb_maize : 181.0) 1,4-alpha-glucan branching enzyme IIB, chloroplast precursor (EC 2.4.1.18) (Starch branching enzyme IIB) (Q-enzyme) - Zea mays (Maize) & (gnl|cdd|35691 : 120.0) no description available & (gnl|cdd|30341 : 103.0) no description available & (reliability: 412.0) & (original description: Putative v1g77598, Description = Predicted protein, PFAM = PF02922)' T '2.1.2.4' 'major CHO metabolism.synthesis.starch.debranching' 'nbv0.3scaffold2337_58609-74704' '(at2g39930 : 1161.0) Encodes an isoamylase-type debranching enzyme. Mutations in this gene cause the loss of detectable isoamylase activity and the disruption of normal starch structure. Mutants have reduced starch content and abnormally structured amylopectins and phytoglycogens. It has been postulated that AtISA1 interacts with AtISA2 to form the Iso1 complex.; isoamylase 1 (ISA1); FUNCTIONS IN: isoamylase activity, alpha-amylase activity; INVOLVED IN: carbohydrate metabolic process, amylopectin biosynthetic process; LOCATED IN: chloroplast, chloroplast isoamylase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: isoamylase 3 (TAIR:AT4G09020.1); Has 17979 Blast hits to 17918 proteins in 2410 species: Archae - 161; Bacteria - 15130; Metazoa - 257; Fungi - 410; Plants - 747; Viruses - 0; Other Eukaryotes - 1274 (source: NCBI BLink). & (gnl|cdd|35691 : 605.0) no description available & (gnl|cdd|31712 : 580.0) no description available & (reliability: 2322.0) & (original description: Putative ISA1, Description = Isoamylase 1, chloroplastic, PFAM = PF02922;PF00128)' T '2.1.2.4' 'major CHO metabolism.synthesis.starch.debranching' 'niben101scf00914_92145-108146' '(at2g39930 : 1215.0) Encodes an isoamylase-type debranching enzyme. Mutations in this gene cause the loss of detectable isoamylase activity and the disruption of normal starch structure. Mutants have reduced starch content and abnormally structured amylopectins and phytoglycogens. It has been postulated that AtISA1 interacts with AtISA2 to form the Iso1 complex.; isoamylase 1 (ISA1); FUNCTIONS IN: isoamylase activity, alpha-amylase activity; INVOLVED IN: carbohydrate metabolic process, amylopectin biosynthetic process; LOCATED IN: chloroplast, chloroplast isoamylase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: isoamylase 3 (TAIR:AT4G09020.1); Has 17979 Blast hits to 17918 proteins in 2410 species: Archae - 161; Bacteria - 15130; Metazoa - 257; Fungi - 410; Plants - 747; Viruses - 0; Other Eukaryotes - 1274 (source: NCBI BLink). & (gnl|cdd|35691 : 643.0) no description available & (gnl|cdd|31712 : 631.0) no description available & (reliability: 2430.0) & (original description: Putative ISA1, Description = Isoamylase 1, chloroplastic, PFAM = PF00128;PF02922)' T '2.1.2.4' 'major CHO metabolism.synthesis.starch.debranching' 'niben101scf01509_116799-121384' '(at1g03310 : 867.0) Encodes a protein with strong similarity to isoamylase (EC:3.2.1.68) however lacks critical residues known to be important for activity. Appears to co localize with ISA1 in the chloroplast isoamylase complex. Mutations in this gene cause the loss of detectable isoamylase activity and the disruption of normal starch structure. It has been postulated that AtISA2 interacts with AtISA1 to form the Iso1 complex.; debranching enzyme 1 (DBE1); FUNCTIONS IN: isoamylase activity, alpha-amylase activity; INVOLVED IN: carbohydrate metabolic process, amylopectin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: isoamylase 3 (TAIR:AT4G09020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35691 : 378.0) no description available & (gnl|cdd|31712 : 349.0) no description available & (reliability: 1734.0) & (original description: Putative ISA2, Description = Isoamylase 2, chloroplastic, PFAM = PF02922;PF00128)' T '2.1.2.4' 'major CHO metabolism.synthesis.starch.debranching' 'niben101scf04776_83592-88006' '(at1g03310 : 891.0) Encodes a protein with strong similarity to isoamylase (EC:3.2.1.68) however lacks critical residues known to be important for activity. Appears to co localize with ISA1 in the chloroplast isoamylase complex. Mutations in this gene cause the loss of detectable isoamylase activity and the disruption of normal starch structure. It has been postulated that AtISA2 interacts with AtISA1 to form the Iso1 complex.; debranching enzyme 1 (DBE1); FUNCTIONS IN: isoamylase activity, alpha-amylase activity; INVOLVED IN: carbohydrate metabolic process, amylopectin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: isoamylase 3 (TAIR:AT4G09020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35691 : 395.0) no description available & (gnl|cdd|31712 : 360.0) no description available & (reliability: 1782.0) & (original description: Putative ISA2, Description = Isoamylase 2, chloroplastic, PFAM = PF02922;PF00128)' T '2.1.2.5' 'major CHO metabolism.synthesis.starch.transporter' '' '' '2.1.2.60' 'major CHO metabolism.synthesis.starch.ADP Glucose Phosphorylase' 'niben101scf07155_19643-27407' '(at5g18200 : 381.0) encodes an adenylyltransferase; UTP:galactose-1-phosphate uridylyltransferases;ribose-5-phosphate adenylyltransferases; CONTAINS InterPro DOMAIN/s: Galactose-1-phosphate uridyl transferase, N-terminal (InterPro:IPR005849), Histidine triad-like motif (InterPro:IPR011146), Galactose-1-phosphate uridyl transferase, class I (InterPro:IPR001937), Histidine triad motif (InterPro:IPR011151); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29587 : 303.0) no description available & (gnl|cdd|38169 : 288.0) no description available & (reliability: 762.0) & (original description: Putative At5g18200, Description = ADP-glucose phosphorylase, PFAM = PF01087)' T '2.1.2.1001' 'major CHO metabolism.synthesis.starch' 'fructose-6-p' 'cell wall synthesis.cellulose synthesis; major CHO metabolism.synthesis.sucrose; major CHO metabolism.synthesis.starch; glycolysis; OPP.oxidative PP' M '2.1.2.1002' 'major CHO metabolism.synthesis.starch' 'glucose-6-p' 'cell wall synthesis.cellulose synthesis; major CHO metabolism.synthesis.sucrose; major CHO metabolism.synthesis.starch; glycolysis; OPP.oxidative PP' M '2.1.2.1003' 'major CHO metabolism.synthesis.starch' 'glucose-1-p' 'cell wall synthesis.cellulose synthesis; major CHO metabolism.synthesis.sucrose; major CHO metabolism.synthesis.starch' M '2.1.2.1004' 'major CHO metabolism.synthesis.starch' 'adp-glucose' 'major CHO metabolism.synthesis.starch' M '2.2' 'major CHO metabolism.degradation' '' '' '2.2.1' 'major CHO metabolism.degradation.sucrose' '' '' '2.2.1.1' 'major CHO metabolism.degradation.sucrose.fructokinase' 'niben044scf00023820ctg001_2933-7354' '(at5g51830 : 508.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT1G66430.1); Has 18609 Blast hits to 18603 proteins in 2379 species: Archae - 380; Bacteria - 13935; Metazoa - 140; Fungi - 105; Plants - 504; Viruses - 0; Other Eukaryotes - 3545 (source: NCBI BLink). & (q944f4|scrk1_orysa : 434.0) Fructokinase-1 (EC 2.7.1.4) (Fructokinase I) (OsFKI) - Oryza sativa (Rice) & (gnl|cdd|38066 : 377.0) no description available & (gnl|cdd|29351 : 337.0) no description available & (reliability: 1016.0) & (original description: Putative frk1, Description = Fructokinase, PFAM = PF00294)' T '2.2.1.1' 'major CHO metabolism.degradation.sucrose.fructokinase' 'niben044scf00036753ctg000_1-4038' '(at3g54090 : 671.0) Encodes a fructokinase-like protein (AT3G54090/FLN1, AT1G69200/FLN2), a member of the pfkB-carbohydrate kinase family. FLN1 and FLN2 are potential plastidial thioredoxin z (TRX z) targets.; fructokinase-like 1 (FLN1); FUNCTIONS IN: kinase activity; INVOLVED IN: acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; LOCATED IN: chloroplast nucleoid, nucleus, chloroplast, nucleoid, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: fructokinase-like 2 (TAIR:AT1G69200.1); Has 4776 Blast hits to 4772 proteins in 1393 species: Archae - 92; Bacteria - 3898; Metazoa - 5; Fungi - 2; Plants - 280; Viruses - 0; Other Eukaryotes - 499 (source: NCBI BLink). & (gnl|cdd|38066 : 309.0) no description available & (gnl|cdd|29351 : 295.0) no description available & (q944f4|scrk1_orysa : 189.0) Fructokinase-1 (EC 2.7.1.4) (Fructokinase I) (OsFKI) - Oryza sativa (Rice) & (reliability: 1342.0) & (original description: Putative FLN1, Description = Fructokinase-like 1, chloroplastic, PFAM = PF00294)' T '2.2.1.1' 'major CHO metabolism.degradation.sucrose.fructokinase' 'niben101scf00069_1593678-1601455' '(at1g66430 : 439.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT5G51830.1); Has 20370 Blast hits to 20366 proteins in 2496 species: Archae - 409; Bacteria - 15079; Metazoa - 242; Fungi - 159; Plants - 598; Viruses - 0; Other Eukaryotes - 3883 (source: NCBI BLink). & (gnl|cdd|38066 : 355.0) no description available & (gnl|cdd|29351 : 302.0) no description available & (q6xz78|scrk2_maize : 298.0) Fructokinase-2 (EC 2.7.1.4) (ZmFRK2) - Zea mays (Maize) & (reliability: 878.0) & (original description: Putative frk1, Description = Fructokinase, PFAM = PF00294)' T '2.2.1.1' 'major CHO metabolism.degradation.sucrose.fructokinase' 'niben101scf00217_16064-23051' '(p37829|scrk_soltu : 581.0) Fructokinase (EC 2.7.1.4) - Solanum tuberosum (Potato) & (at3g59480 : 561.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT2G31390.1); Has 19806 Blast hits to 19802 proteins in 2455 species: Archae - 383; Bacteria - 15070; Metazoa - 140; Fungi - 136; Plants - 477; Viruses - 0; Other Eukaryotes - 3600 (source: NCBI BLink). & (gnl|cdd|38066 : 407.0) no description available & (gnl|cdd|29351 : 356.0) no description available & (reliability: 1122.0) & (original description: Putative frk1, Description = Fructokinase, PFAM = PF00294)' T '2.2.1.1' 'major CHO metabolism.degradation.sucrose.fructokinase' 'niben101scf01258_251957-256188' '(p37829|scrk_soltu : 336.0) Fructokinase (EC 2.7.1.4) - Solanum tuberosum (Potato) & (at1g06030 : 332.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT1G06020.1); Has 18996 Blast hits to 18990 proteins in 2425 species: Archae - 390; Bacteria - 14287; Metazoa - 160; Fungi - 120; Plants - 469; Viruses - 0; Other Eukaryotes - 3570 (source: NCBI BLink). & (gnl|cdd|38066 : 239.0) no description available & (gnl|cdd|29351 : 216.0) no description available & (reliability: 664.0) & (original description: Putative frk1, Description = Fructokinase, PFAM = PF00294)' T '2.2.1.1' 'major CHO metabolism.degradation.sucrose.fructokinase' 'niben101scf02151_527563-532685' '(at1g69200 : 548.0) Encodes a fructokinase-like protein (AT3G54090/FLN1, AT1G69200/FLN2), a member of the pfkB-carbohydrate kinase family. FLN1 and FLN2 are potential plastidial thioredoxin z (TRX z) targets.; fructokinase-like 2 (FLN2); FUNCTIONS IN: kinase activity; INVOLVED IN: acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; LOCATED IN: chloroplast nucleoid, nucleoid; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611); BEST Arabidopsis thaliana protein match is: fructokinase-like 1 (TAIR:AT3G54090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38066 : 268.0) no description available & (gnl|cdd|29351 : 258.0) no description available & (q944f4|scrk1_orysa : 148.0) Fructokinase-1 (EC 2.7.1.4) (Fructokinase I) (OsFKI) - Oryza sativa (Rice) & (reliability: 1096.0) & (original description: Putative FLN2, Description = Fructokinase-like 2, chloroplastic, PFAM = PF00294)' T '2.2.1.1' 'major CHO metabolism.degradation.sucrose.fructokinase' 'niben101scf03949_136260-140669' '(at4g10260 : 491.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, sepal, male gametophyte, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT3G59480.1); Has 19547 Blast hits to 19543 proteins in 2443 species: Archae - 410; Bacteria - 14542; Metazoa - 141; Fungi - 136; Plants - 489; Viruses - 0; Other Eukaryotes - 3829 (source: NCBI BLink). & (q944f5|scrk2_orysa : 481.0) Fructokinase-2 (EC 2.7.1.4) (Fructokinase II) (OsFKII) - Oryza sativa (Rice) & (gnl|cdd|38066 : 370.0) no description available & (gnl|cdd|29351 : 351.0) no description available & (reliability: 982.0) & (original description: Putative frk1, Description = Fructokinase, PFAM = PF00294)' T '2.2.1.1' 'major CHO metabolism.degradation.sucrose.fructokinase' 'niben101scf04782_232234-238548' '(at1g66430 : 516.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT5G51830.1); Has 20370 Blast hits to 20366 proteins in 2496 species: Archae - 409; Bacteria - 15079; Metazoa - 242; Fungi - 159; Plants - 598; Viruses - 0; Other Eukaryotes - 3883 (source: NCBI BLink). & (gnl|cdd|38066 : 392.0) no description available & (q944f5|scrk2_orysa : 375.0) Fructokinase-2 (EC 2.7.1.4) (Fructokinase II) (OsFKII) - Oryza sativa (Rice) & (gnl|cdd|29351 : 346.0) no description available & (reliability: 1032.0) & (original description: Putative frk1, Description = Fructokinase, PFAM = PF00294)' T '2.2.1.1' 'major CHO metabolism.degradation.sucrose.fructokinase' 'niben101scf05298_26193-30585' '(at3g54090 : 671.0) Encodes a fructokinase-like protein (AT3G54090/FLN1, AT1G69200/FLN2), a member of the pfkB-carbohydrate kinase family. FLN1 and FLN2 are potential plastidial thioredoxin z (TRX z) targets.; fructokinase-like 1 (FLN1); FUNCTIONS IN: kinase activity; INVOLVED IN: acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; LOCATED IN: chloroplast nucleoid, nucleus, chloroplast, nucleoid, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: fructokinase-like 2 (TAIR:AT1G69200.1); Has 4776 Blast hits to 4772 proteins in 1393 species: Archae - 92; Bacteria - 3898; Metazoa - 5; Fungi - 2; Plants - 280; Viruses - 0; Other Eukaryotes - 499 (source: NCBI BLink). & (gnl|cdd|38066 : 308.0) no description available & (gnl|cdd|29351 : 294.0) no description available & (q944f4|scrk1_orysa : 188.0) Fructokinase-1 (EC 2.7.1.4) (Fructokinase I) (OsFKI) - Oryza sativa (Rice) & (reliability: 1342.0) & (original description: Putative FLN1, Description = Fructokinase-like 1, chloroplastic, PFAM = PF00294)' T '2.2.1.1' 'major CHO metabolism.degradation.sucrose.fructokinase' 'niben101scf05414_255663-260971' '(at1g69200 : 552.0) Encodes a fructokinase-like protein (AT3G54090/FLN1, AT1G69200/FLN2), a member of the pfkB-carbohydrate kinase family. FLN1 and FLN2 are potential plastidial thioredoxin z (TRX z) targets.; fructokinase-like 2 (FLN2); FUNCTIONS IN: kinase activity; INVOLVED IN: acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; LOCATED IN: chloroplast nucleoid, nucleoid; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611); BEST Arabidopsis thaliana protein match is: fructokinase-like 1 (TAIR:AT3G54090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38066 : 266.0) no description available & (gnl|cdd|29351 : 258.0) no description available & (q944f4|scrk1_orysa : 157.0) Fructokinase-1 (EC 2.7.1.4) (Fructokinase I) (OsFKI) - Oryza sativa (Rice) & (reliability: 1104.0) & (original description: Putative FLN2, Description = Fructokinase-like 2, chloroplastic, PFAM = PF00294)' T '2.2.1.1' 'major CHO metabolism.degradation.sucrose.fructokinase' 'niben101scf05552_220670-236999' '(at5g51830 : 530.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT1G66430.1); Has 18609 Blast hits to 18603 proteins in 2379 species: Archae - 380; Bacteria - 13935; Metazoa - 140; Fungi - 105; Plants - 504; Viruses - 0; Other Eukaryotes - 3545 (source: NCBI BLink). & (q944f4|scrk1_orysa : 405.0) Fructokinase-1 (EC 2.7.1.4) (Fructokinase I) (OsFKI) - Oryza sativa (Rice) & (gnl|cdd|38066 : 366.0) no description available & (gnl|cdd|29351 : 334.0) no description available & (reliability: 1060.0) & (original description: Putative frk1, Description = Fructokinase, PFAM = PF00294)' T '2.2.1.1' 'major CHO metabolism.degradation.sucrose.fructokinase' 'niben101scf05809_63246-67249' '(at4g10260 : 487.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, sepal, male gametophyte, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT3G59480.1); Has 19547 Blast hits to 19543 proteins in 2443 species: Archae - 410; Bacteria - 14542; Metazoa - 141; Fungi - 136; Plants - 489; Viruses - 0; Other Eukaryotes - 3829 (source: NCBI BLink). & (q944f5|scrk2_orysa : 480.0) Fructokinase-2 (EC 2.7.1.4) (Fructokinase II) (OsFKII) - Oryza sativa (Rice) & (gnl|cdd|38066 : 365.0) no description available & (gnl|cdd|29351 : 346.0) no description available & (reliability: 974.0) & (original description: Putative frk1, Description = Fructokinase, PFAM = PF00294)' T '2.2.1.3' 'major CHO metabolism.degradation.sucrose.invertases' '' '' '2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'nbv0.3scaffold5960_13258-21944' '(at5g22510 : 875.0) Encodes a chloroplast-targeted alkaline/neutral invertase that is implicated in the development of the photosynthetic apparatus and nitrogen assimilation in seedlings to control the sucrose to hexose ratio.; alkaline/neutral invertase (INV-E); FUNCTIONS IN: beta-fructofuranosidase activity; INVOLVED IN: cotyledon development, starch metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Plant neutral invertase family protein (TAIR:AT1G56560.1); Has 679 Blast hits to 676 proteins in 97 species: Archae - 0; Bacteria - 134; Metazoa - 0; Fungi - 0; Plants - 315; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|68428 : 818.0) no description available & (reliability: 1750.0) & (original description: Putative INVE, Description = Alkaline/neutral invertase E, chloroplastic, PFAM = PF12899)' T '2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'nbv0.3scaffold29938_17852-24086' '(at4g09510 : 1000.0) CINV2 appears to function as a neutral invertase based on the phenotype of a cinv1(AT1G35580)/cinv2 double mutant. It is predicted to be a cytosolic enzyme. CINV1, CINV2, and possibly other cytosolic invertases may play an important role in supplying carbon from sucrose to non-photosynthetic tissues.; cytosolic invertase 2 (CINV2); FUNCTIONS IN: sucrose alpha-glucosidase activity, beta-fructofuranosidase activity; INVOLVED IN: sucrose catabolic process, using invertase or sucrose synthase, root development; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 1 (TAIR:AT1G35580.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 793.0) no description available & (reliability: 2000.0) & (original description: Putative inv1, Description = Putative neutral/alkaline invertase, PFAM = PF12899)' T '2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'nbv0.3scaffold32081_2875-9451' '(at4g34860 : 983.0) Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 2 (TAIR:AT4G09510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 759.0) no description available & (reliability: 1966.0) & (original description: Putative ni1, Description = Putative neutral invertase, PFAM = PF12899)' T '2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'nbv0.3scaffold70249_122-6971' '(at1g56560 : 942.0) Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: invertase H (TAIR:AT3G05820.1); Has 679 Blast hits to 678 proteins in 94 species: Archae - 0; Bacteria - 126; Metazoa - 0; Fungi - 0; Plants - 313; Viruses - 0; Other Eukaryotes - 240 (source: NCBI BLink). & (gnl|cdd|68428 : 840.0) no description available & (reliability: 1884.0) & (original description: Putative ni2, Description = Putative neutral invertase, PFAM = PF12899)' T '2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'nbv0.3scaffold79244_158-3318' '(at3g05820 : 179.0) Encodes a putative plastid-targeted alkaline/neutral invertase.; invertase H (INVH); FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Plant neutral invertase family protein (TAIR:AT1G56560.1); Has 687 Blast hits to 684 proteins in 100 species: Archae - 0; Bacteria - 137; Metazoa - 0; Fungi - 0; Plants - 316; Viruses - 0; Other Eukaryotes - 234 (source: NCBI BLink). & (gnl|cdd|68428 : 145.0) no description available & (reliability: 358.0) & (original description: Putative inv, Description = Neutral/alkaline invertase, PFAM = PF12899)' T '2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'nbv0.5scaffold382_717341-724899' '(at4g09510 : 850.0) CINV2 appears to function as a neutral invertase based on the phenotype of a cinv1(AT1G35580)/cinv2 double mutant. It is predicted to be a cytosolic enzyme. CINV1, CINV2, and possibly other cytosolic invertases may play an important role in supplying carbon from sucrose to non-photosynthetic tissues.; cytosolic invertase 2 (CINV2); FUNCTIONS IN: sucrose alpha-glucosidase activity, beta-fructofuranosidase activity; INVOLVED IN: sucrose catabolic process, using invertase or sucrose synthase, root development; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 1 (TAIR:AT1G35580.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 718.0) no description available & (reliability: 1700.0) & (original description: Putative inv1, Description = Putative neutral/alkaline invertase, PFAM = PF12899)' T '2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'nbv0.5scaffold3926_187973-194827' '(at1g56560 : 945.0) Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: invertase H (TAIR:AT3G05820.1); Has 679 Blast hits to 678 proteins in 94 species: Archae - 0; Bacteria - 126; Metazoa - 0; Fungi - 0; Plants - 313; Viruses - 0; Other Eukaryotes - 240 (source: NCBI BLink). & (gnl|cdd|68428 : 843.0) no description available & (reliability: 1890.0) & (original description: Putative ni3, Description = Putative neutral invertase, PFAM = PF12899)' T '2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben044scf00000503ctg002_14623-22002' '(at4g34860 : 978.0) Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 2 (TAIR:AT4G09510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 754.0) no description available & (reliability: 1956.0) & (original description: Putative ni1, Description = Putative neutral invertase, PFAM = PF12899)' T '2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben044scf00019301ctg001_1-1661' '(at1g72000 : 368.0) Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Plant neutral invertase family protein (TAIR:AT1G22650.1); Has 697 Blast hits to 694 proteins in 99 species: Archae - 0; Bacteria - 135; Metazoa - 0; Fungi - 0; Plants - 316; Viruses - 0; Other Eukaryotes - 246 (source: NCBI BLink). & (gnl|cdd|68428 : 323.0) no description available & (reliability: 736.0) & (original description: Putative inv, Description = Neutral/alkaline invertase, PFAM = PF12899)' T '2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben044scf00044503ctg004_1537-5508' '(at4g34860 : 131.0) Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 2 (TAIR:AT4G09510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 123.0) no description available & (reliability: 262.0) & (original description: Putative inv, Description = Neutral/alkaline invertase, PFAM = PF12899)' T '2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben101scf00883_1327256-1329555' '(at4g34860 : 182.0) Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 2 (TAIR:AT4G09510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 147.0) no description available & (reliability: 364.0) & (original description: Putative inv1, Description = Neutral invertase, PFAM = PF12899)' T '2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben101scf01681_358669-360995' '(at4g34860 : 135.0) Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 2 (TAIR:AT4G09510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 127.0) no description available & (reliability: 270.0) & (original description: Putative inv, Description = Neutral/alkaline invertase, PFAM = PF12899)' T '2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben101scf02175_584568-590854' '(at4g34860 : 915.0) Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 2 (TAIR:AT4G09510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 732.0) no description available & (reliability: 1830.0) & (original description: Putative ni1, Description = Putative neutral invertase, PFAM = PF12899)' T '2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben101scf02272_250396-256534' '(at4g09510 : 851.0) CINV2 appears to function as a neutral invertase based on the phenotype of a cinv1(AT1G35580)/cinv2 double mutant. It is predicted to be a cytosolic enzyme. CINV1, CINV2, and possibly other cytosolic invertases may play an important role in supplying carbon from sucrose to non-photosynthetic tissues.; cytosolic invertase 2 (CINV2); FUNCTIONS IN: sucrose alpha-glucosidase activity, beta-fructofuranosidase activity; INVOLVED IN: sucrose catabolic process, using invertase or sucrose synthase, root development; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 1 (TAIR:AT1G35580.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 718.0) no description available & (reliability: 1702.0) & (original description: Putative inv1, Description = Putative neutral/alkaline invertase, PFAM = PF12899)' T '2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben101scf04117_1110728-1118792' '(at4g09510 : 1000.0) CINV2 appears to function as a neutral invertase based on the phenotype of a cinv1(AT1G35580)/cinv2 double mutant. It is predicted to be a cytosolic enzyme. CINV1, CINV2, and possibly other cytosolic invertases may play an important role in supplying carbon from sucrose to non-photosynthetic tissues.; cytosolic invertase 2 (CINV2); FUNCTIONS IN: sucrose alpha-glucosidase activity, beta-fructofuranosidase activity; INVOLVED IN: sucrose catabolic process, using invertase or sucrose synthase, root development; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 1 (TAIR:AT1G35580.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 794.0) no description available & (reliability: 2000.0) & (original description: Putative inv1, Description = Putative neutral/alkaline invertase, PFAM = PF12899)' T '2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben101scf08621_193208-200373' '(at4g09510 : 1005.0) CINV2 appears to function as a neutral invertase based on the phenotype of a cinv1(AT1G35580)/cinv2 double mutant. It is predicted to be a cytosolic enzyme. CINV1, CINV2, and possibly other cytosolic invertases may play an important role in supplying carbon from sucrose to non-photosynthetic tissues.; cytosolic invertase 2 (CINV2); FUNCTIONS IN: sucrose alpha-glucosidase activity, beta-fructofuranosidase activity; INVOLVED IN: sucrose catabolic process, using invertase or sucrose synthase, root development; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 1 (TAIR:AT1G35580.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 784.0) no description available & (reliability: 2010.0) & (original description: Putative inv1, Description = Putative neutral/alkaline invertase, PFAM = PF12899)' T '2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben101scf11778_92467-100996' '(at5g22510 : 876.0) Encodes a chloroplast-targeted alkaline/neutral invertase that is implicated in the development of the photosynthetic apparatus and nitrogen assimilation in seedlings to control the sucrose to hexose ratio.; alkaline/neutral invertase (INV-E); FUNCTIONS IN: beta-fructofuranosidase activity; INVOLVED IN: cotyledon development, starch metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Plant neutral invertase family protein (TAIR:AT1G56560.1); Has 679 Blast hits to 676 proteins in 97 species: Archae - 0; Bacteria - 134; Metazoa - 0; Fungi - 0; Plants - 315; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|68428 : 819.0) no description available & (reliability: 1752.0) & (original description: Putative INVE, Description = Alkaline/neutral invertase E, chloroplastic, PFAM = PF12899)' T '2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben101scf13029_277843-287952' '(at5g22510 : 914.0) Encodes a chloroplast-targeted alkaline/neutral invertase that is implicated in the development of the photosynthetic apparatus and nitrogen assimilation in seedlings to control the sucrose to hexose ratio.; alkaline/neutral invertase (INV-E); FUNCTIONS IN: beta-fructofuranosidase activity; INVOLVED IN: cotyledon development, starch metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Plant neutral invertase family protein (TAIR:AT1G56560.1); Has 679 Blast hits to 676 proteins in 97 species: Archae - 0; Bacteria - 134; Metazoa - 0; Fungi - 0; Plants - 315; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|68428 : 832.0) no description available & (reliability: 1828.0) & (original description: Putative INVE, Description = Alkaline/neutral invertase E, chloroplastic, PFAM = PF12899)' T '2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben101scf13332_30359-36498' '(at4g34860 : 959.0) Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 2 (TAIR:AT4G09510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 753.0) no description available & (reliability: 1918.0) & (original description: Putative SNI1, Description = Neutral/alkaline invertase 1, PFAM = PF12899)' T '2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben101scf16108_1112-8440' '(at4g09510 : 818.0) CINV2 appears to function as a neutral invertase based on the phenotype of a cinv1(AT1G35580)/cinv2 double mutant. It is predicted to be a cytosolic enzyme. CINV1, CINV2, and possibly other cytosolic invertases may play an important role in supplying carbon from sucrose to non-photosynthetic tissues.; cytosolic invertase 2 (CINV2); FUNCTIONS IN: sucrose alpha-glucosidase activity, beta-fructofuranosidase activity; INVOLVED IN: sucrose catabolic process, using invertase or sucrose synthase, root development; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 1 (TAIR:AT1G35580.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 642.0) no description available & (reliability: 1636.0) & (original description: Putative inv, Description = Neutral/alkaline invertase, PFAM = PF12899)' T '2.2.1.3.1' 'major CHO metabolism.degradation.sucrose.invertases.neutral' 'niben101scf16888_133287-138976' '(at4g34860 : 972.0) Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 2 (TAIR:AT4G09510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68428 : 759.0) no description available & (reliability: 1944.0) & (original description: Putative ni1, Description = Putative neutral invertase, PFAM = PF12899)' T '2.2.1.3.2' 'major CHO metabolism.degradation.sucrose.invertases.cell wall' 'nbv0.3scaffold70519_651-8246' '(p26792|inv1_dauca : 825.0) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) - Daucus carota (Carrot) & (at3g52600 : 729.0) cell wall invertase 2 (CWINV2); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cell wall invertase 4 (TAIR:AT2G36190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35449 : 677.0) no description available & (gnl|cdd|47917 : 443.0) no description available & (reliability: 1458.0) & (original description: Putative lin5, Description = Beta-fructofuranosidase, PFAM = PF08244;PF00251)' T '2.2.1.3.2' 'major CHO metabolism.degradation.sucrose.invertases.cell wall' 'nbv0.5scaffold2635_61626-66988' '(p26792|inv1_dauca : 821.0) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) - Daucus carota (Carrot) & (at3g52600 : 721.0) cell wall invertase 2 (CWINV2); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cell wall invertase 4 (TAIR:AT2G36190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35449 : 660.0) no description available & (gnl|cdd|47917 : 446.0) no description available & (reliability: 1442.0) & (original description: Putative lin5, Description = Beta-fructofuranosidase, PFAM = PF00251;PF08244)' T '2.2.1.3.2' 'major CHO metabolism.degradation.sucrose.invertases.cell wall' 'nbv0.5scaffold3896_61517-165064' '(at1g55120 : 121.0) Encodes a protein with fructan exohydrolase (FEH) activity acting on levan-type fructans (6-FEH, levanase). The enzyme does not have invertase activity.; beta-fructofuranosidase 5 (FRUCT5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, levanase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 32 protein (TAIR:AT3G13790.2). & (gnl|cdd|35449 : 112.0) no description available & (q56ud1|inv5_orysa : 107.0) Beta-fructofuranosidase, insoluble isoenzyme 5 (EC 3.2.1.26) (Sucrose hydrolase 5) (Invertase 5) (Cell wall beta-fructosidase 5) (OsCIN5) (Fragment) - Oryza sativa (Rice) & (reliability: 240.0) & (original description: Putative aleh2, Description = Cell wall invertase, PFAM = PF08244)' T '2.2.1.3.2' 'major CHO metabolism.degradation.sucrose.invertases.cell wall' 'niben044scf00025049ctg001_2230-5266' '(at1g55120 : 225.0) Encodes a protein with fructan exohydrolase (FEH) activity acting on levan-type fructans (6-FEH, levanase). The enzyme does not have invertase activity.; beta-fructofuranosidase 5 (FRUCT5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, levanase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 32 protein (TAIR:AT3G13790.2). & (gnl|cdd|35449 : 207.0) no description available & (q56ud1|inv5_orysa : 197.0) Beta-fructofuranosidase, insoluble isoenzyme 5 (EC 3.2.1.26) (Sucrose hydrolase 5) (Invertase 5) (Cell wall beta-fructosidase 5) (OsCIN5) (Fragment) - Oryza sativa (Rice) & (reliability: 426.0) & (original description: Putative lin5, Description = Cell wall invertase, PFAM = PF08244)' T '2.2.1.3.2' 'major CHO metabolism.degradation.sucrose.invertases.cell wall' 'niben101scf02078_872250-878620' '(at3g13790 : 602.0) Encodes a protein with invertase activity.; ATBFRUCT1; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: beta-fructofuranosidase 5 (TAIR:AT1G55120.1). & (gnl|cdd|35449 : 597.0) no description available & (p26792|inv1_dauca : 540.0) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) - Daucus carota (Carrot) & (gnl|cdd|47917 : 374.0) no description available & (reliability: 1204.0) & (original description: Putative CWINV1, Description = Beta-fructofuranosidase, insoluble isoenzyme CWINV1, PFAM = PF00251;PF08244)' T '2.2.1.3.2' 'major CHO metabolism.degradation.sucrose.invertases.cell wall' 'niben101scf02459_960350-962734' '(at1g55120 : 110.0) Encodes a protein with fructan exohydrolase (FEH) activity acting on levan-type fructans (6-FEH, levanase). The enzyme does not have invertase activity.; beta-fructofuranosidase 5 (FRUCT5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, levanase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 32 protein (TAIR:AT3G13790.2). & (q56ud1|inv5_orysa : 94.4) Beta-fructofuranosidase, insoluble isoenzyme 5 (EC 3.2.1.26) (Sucrose hydrolase 5) (Invertase 5) (Cell wall beta-fructosidase 5) (OsCIN5) (Fragment) - Oryza sativa (Rice) & (gnl|cdd|35449 : 93.5) no description available & (reliability: 198.8) & (original description: Putative lin5, Description = Beta-fructofuranosidase, PFAM = PF08244)' T '2.2.1.3.2' 'major CHO metabolism.degradation.sucrose.invertases.cell wall' 'niben101scf04632_325314-332521' '(p26792|inv1_dauca : 818.0) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) - Daucus carota (Carrot) & (at3g52600 : 708.0) cell wall invertase 2 (CWINV2); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cell wall invertase 4 (TAIR:AT2G36190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35449 : 671.0) no description available & (gnl|cdd|47917 : 444.0) no description available & (reliability: 1416.0) & (original description: Putative CWINV1, Description = Beta-fructofuranosidase, insoluble isoenzyme CWINV1, PFAM = PF08244;PF00251)' T '2.2.1.3.2' 'major CHO metabolism.degradation.sucrose.invertases.cell wall' 'niben101scf05314_180470-188918' '(p26792|inv1_dauca : 826.0) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) - Daucus carota (Carrot) & (at3g52600 : 729.0) cell wall invertase 2 (CWINV2); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cell wall invertase 4 (TAIR:AT2G36190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35449 : 675.0) no description available & (gnl|cdd|47917 : 442.0) no description available & (reliability: 1458.0) & (original description: Putative lin5, Description = Beta-fructofuranosidase, PFAM = PF00251;PF08244)' T '2.2.1.3.2' 'major CHO metabolism.degradation.sucrose.invertases.cell wall' 'niben101scf09089_110262-116962' '(p26792|inv1_dauca : 769.0) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) - Daucus carota (Carrot) & (at3g52600 : 667.0) cell wall invertase 2 (CWINV2); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cell wall invertase 4 (TAIR:AT2G36190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35449 : 648.0) no description available & (gnl|cdd|47917 : 425.0) no description available & (reliability: 1334.0) & (original description: Putative INV1, Description = Cell wall invertase 1, PFAM = PF08244;PF00251)' T '2.2.1.3.2' 'major CHO metabolism.degradation.sucrose.invertases.cell wall' 'niben101scf12270_229283-236142' '(p26792|inv1_dauca : 842.0) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) - Daucus carota (Carrot) & (at2g36190 : 726.0) cwINV4 appears to function as a cell wall-localized invertase (that can catalyze the hydrolysis of sucrose into fructose and glucose) based on the phenotype of cwinv4 mutants. cwINV4 transcripts are expressed at high levels in lateral and median nectaries and this enzyme plays an important role in nectar production.; cell wall invertase 4 (cwINV4); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycoside hydrolase, family 32, active site (InterPro:IPR018053), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cell wall invertase 2 (TAIR:AT3G52600.1); Has 4207 Blast hits to 4168 proteins in 1243 species: Archae - 18; Bacteria - 2607; Metazoa - 78; Fungi - 284; Plants - 1032; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). & (gnl|cdd|35449 : 693.0) no description available & (gnl|cdd|47917 : 446.0) no description available & (reliability: 1452.0) & (original description: Putative lin5, Description = Beta-fructofuranosidase, PFAM = PF00251;PF08244)' T '2.2.1.3.2' 'major CHO metabolism.degradation.sucrose.invertases.cell wall' 'niben101scf13856_950-6594' '(p26792|inv1_dauca : 795.0) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) - Daucus carota (Carrot) & (at2g36190 : 709.0) cwINV4 appears to function as a cell wall-localized invertase (that can catalyze the hydrolysis of sucrose into fructose and glucose) based on the phenotype of cwinv4 mutants. cwINV4 transcripts are expressed at high levels in lateral and median nectaries and this enzyme plays an important role in nectar production.; cell wall invertase 4 (cwINV4); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycoside hydrolase, family 32, active site (InterPro:IPR018053), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cell wall invertase 2 (TAIR:AT3G52600.1); Has 4207 Blast hits to 4168 proteins in 1243 species: Archae - 18; Bacteria - 2607; Metazoa - 78; Fungi - 284; Plants - 1032; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). & (gnl|cdd|35449 : 665.0) no description available & (gnl|cdd|47917 : 450.0) no description available & (reliability: 1418.0) & (original description: Putative lin5, Description = Beta-fructofuranosidase, PFAM = PF08244;PF00251)' T '2.2.1.3.2' 'major CHO metabolism.degradation.sucrose.invertases.cell wall' 'niben101scf19719_62644-68008' '(p26792|inv1_dauca : 812.0) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) - Daucus carota (Carrot) & (at3g52600 : 718.0) cell wall invertase 2 (CWINV2); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cell wall invertase 4 (TAIR:AT2G36190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35449 : 660.0) no description available & (gnl|cdd|47917 : 450.0) no description available & (reliability: 1436.0) & (original description: Putative CWINV4, Description = Beta-fructofuranosidase, insoluble isoenzyme CWINV4, PFAM = PF08244;PF00251)' T '2.2.1.3.3' 'major CHO metabolism.degradation.sucrose.invertases.vacuolar' 'niben101scf03167_200083-206535' '(p29001|inva_phaau : 823.0) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) [Contains: Acid beta-fructofuranosidase 30 kDa subunit; Acid beta-fructofuranosidase 38 kDa subunit] - Phaseolus au & (at1g12240 : 783.0) ATBETAFRUCT4; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, beta-fructofuranosidase activity; INVOLVED IN: sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3357 (InterPro:IPR021792), Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycoside hydrolase, family 32, active site (InterPro:IPR018053), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 32 protein (TAIR:AT1G62660.1); Has 4142 Blast hits to 4085 proteins in 1233 species: Archae - 18; Bacteria - 2511; Metazoa - 93; Fungi - 293; Plants - 1044; Viruses - 0; Other Eukaryotes - 183 (source: NCBI BLink). & (gnl|cdd|35449 : 595.0) no description available & (gnl|cdd|47917 : 446.0) no description available & (reliability: 1566.0) & (original description: Putative lin9, Description = Invertase, PFAM = PF00251;PF11837;PF08244)' T '2.2.1.3.3' 'major CHO metabolism.degradation.sucrose.invertases.vacuolar' 'niben101scf03853_272133-280045' '(p93761|inv1_capan : 1063.0) Acid beta-fructofuranosidase AIV-18 (EC 3.2.1.26) (Acid sucrose hydrolase) (Acid invertase) - Capsicum annuum (Bell pepper) & (at1g62660 : 718.0) Glycosyl hydrolases family 32 protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3357 (InterPro:IPR021792), Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycoside hydrolase, family 32, active site (InterPro:IPR018053), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 32 protein (TAIR:AT1G12240.1); Has 4144 Blast hits to 4103 proteins in 1239 species: Archae - 18; Bacteria - 2530; Metazoa - 92; Fungi - 278; Plants - 1040; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink). & (gnl|cdd|35449 : 570.0) no description available & (gnl|cdd|47917 : 446.0) no description available & (reliability: 1436.0) & (original description: Putative vi, Description = Vacuolar invertase, PFAM = PF00251;PF11837;PF08244)' T '2.2.1.3.3' 'major CHO metabolism.degradation.sucrose.invertases.vacuolar' 'niben101scf05030_592492-601105' '(p93761|inv1_capan : 1058.0) Acid beta-fructofuranosidase AIV-18 (EC 3.2.1.26) (Acid sucrose hydrolase) (Acid invertase) - Capsicum annuum (Bell pepper) & (at1g62660 : 717.0) Glycosyl hydrolases family 32 protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3357 (InterPro:IPR021792), Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycoside hydrolase, family 32, active site (InterPro:IPR018053), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 32 protein (TAIR:AT1G12240.1); Has 4144 Blast hits to 4103 proteins in 1239 species: Archae - 18; Bacteria - 2530; Metazoa - 92; Fungi - 278; Plants - 1040; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink). & (gnl|cdd|35449 : 571.0) no description available & (gnl|cdd|47917 : 447.0) no description available & (reliability: 1434.0) & (original description: Putative vi, Description = Vacuolar invertase, PFAM = PF00251;PF11837;PF08244)' T '2.2.1.3.30' 'major CHO metabolism.degradation.sucrose.invertases.inhibitors' '' '' '2.2.1.4' 'major CHO metabolism.degradation.sucrose.hexokinase' 'nbv0.3scaffold56039_3640-10077' '(q9sq76|hxk2_soltu : 834.0) Hexokinase-2 (EC 2.7.1.1) (StHK2) - Solanum tuberosum (Potato) & (at2g19860 : 644.0) Encodes a protein with hexokinase activity (AtHXK2) and acts as a sensor for plant sugar responses.; hexokinase 2 (HXK2); CONTAINS InterPro DOMAIN/s: Hexokinase, N-terminal (InterPro:IPR022672), Hexokinase, conserved site (InterPro:IPR019807), Hexokinase, C-terminal (InterPro:IPR022673), Hexokinase (InterPro:IPR001312); BEST Arabidopsis thaliana protein match is: hexokinase 1 (TAIR:AT4G29130.1); Has 2393 Blast hits to 2115 proteins in 319 species: Archae - 0; Bacteria - 88; Metazoa - 1275; Fungi - 598; Plants - 290; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (gnl|cdd|36583 : 534.0) no description available & (gnl|cdd|34631 : 327.0) no description available & (reliability: 1288.0) & (original description: Putative HXK2, Description = Hexokinase-2, PFAM = PF03727;PF00349)' T '2.2.1.4' 'major CHO metabolism.degradation.sucrose.hexokinase' 'nbv0.3scaffold89902_57-5454' '(q6q8a5|hxk2_tobac : 933.0) Hexokinase-2, chloroplast precursor (EC 2.7.1.1) (NtHxK2) - Nicotiana tabacum (Common tobacco) & (at1g47840 : 600.0) Encodes a putative hexokinase.; hexokinase 3 (HXK3); CONTAINS InterPro DOMAIN/s: Hexokinase, N-terminal (InterPro:IPR022672), Hexokinase, conserved site (InterPro:IPR019807), Hexokinase, C-terminal (InterPro:IPR022673), Hexokinase (InterPro:IPR001312); BEST Arabidopsis thaliana protein match is: hexokinase 1 (TAIR:AT4G29130.1); Has 2416 Blast hits to 2143 proteins in 322 species: Archae - 0; Bacteria - 89; Metazoa - 1294; Fungi - 612; Plants - 287; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink). & (gnl|cdd|36583 : 502.0) no description available & (gnl|cdd|34631 : 308.0) no description available & (reliability: 1200.0) & (original description: Putative HXK2, Description = Hexokinase-2, chloroplastic, PFAM = PF03727;PF00349)' T '2.2.1.4' 'major CHO metabolism.degradation.sucrose.hexokinase' 'nbv0.5scaffold138_1086324-1094774' '(q9sek2|hxk1_tobac : 883.0) Hexokinase-1 (EC 2.7.1.1) (NtHxK1) - Nicotiana tabacum (Common tobacco) & (at2g19860 : 658.0) Encodes a protein with hexokinase activity (AtHXK2) and acts as a sensor for plant sugar responses.; hexokinase 2 (HXK2); CONTAINS InterPro DOMAIN/s: Hexokinase, N-terminal (InterPro:IPR022672), Hexokinase, conserved site (InterPro:IPR019807), Hexokinase, C-terminal (InterPro:IPR022673), Hexokinase (InterPro:IPR001312); BEST Arabidopsis thaliana protein match is: hexokinase 1 (TAIR:AT4G29130.1); Has 2393 Blast hits to 2115 proteins in 319 species: Archae - 0; Bacteria - 88; Metazoa - 1275; Fungi - 598; Plants - 290; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (gnl|cdd|36583 : 541.0) no description available & (gnl|cdd|34631 : 338.0) no description available & (reliability: 1316.0) & (original description: Putative HXK1, Description = Hexokinase-1, PFAM = PF03727;PF00349)' T '2.2.1.4' 'major CHO metabolism.degradation.sucrose.hexokinase' 'nbv0.5scaffold8020_42865-52081' '(at1g50460 : 577.0) hexokinase-like 1 (HKL1); FUNCTIONS IN: hexokinase activity, ATP binding; INVOLVED IN: response to salt stress, response to cold, response to osmotic stress; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hexokinase, N-terminal (InterPro:IPR022672), Hexokinase, C-terminal (InterPro:IPR022673), Hexokinase (InterPro:IPR001312); BEST Arabidopsis thaliana protein match is: Hexokinase (TAIR:AT3G20040.1); Has 2396 Blast hits to 2128 proteins in 324 species: Archae - 0; Bacteria - 92; Metazoa - 1286; Fungi - 598; Plants - 287; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (q2knb4|hxk3_orysa : 523.0) Hexokinase-3 (EC 2.7.1.1) (Hexokinase-8) - Oryza sativa (Rice) & (gnl|cdd|36583 : 509.0) no description available & (gnl|cdd|34631 : 311.0) no description available & (reliability: 1154.0) & (original description: Putative hxk1, Description = Phosphotransferase, PFAM = PF00349;PF03727)' T '2.2.1.4' 'major CHO metabolism.degradation.sucrose.hexokinase' 'niben101scf01539_388017-395035' '(q9sq76|hxk2_soltu : 828.0) Hexokinase-2 (EC 2.7.1.1) (StHK2) - Solanum tuberosum (Potato) & (at2g19860 : 645.0) Encodes a protein with hexokinase activity (AtHXK2) and acts as a sensor for plant sugar responses.; hexokinase 2 (HXK2); CONTAINS InterPro DOMAIN/s: Hexokinase, N-terminal (InterPro:IPR022672), Hexokinase, conserved site (InterPro:IPR019807), Hexokinase, C-terminal (InterPro:IPR022673), Hexokinase (InterPro:IPR001312); BEST Arabidopsis thaliana protein match is: hexokinase 1 (TAIR:AT4G29130.1); Has 2393 Blast hits to 2115 proteins in 319 species: Archae - 0; Bacteria - 88; Metazoa - 1275; Fungi - 598; Plants - 290; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (gnl|cdd|36583 : 535.0) no description available & (gnl|cdd|34631 : 331.0) no description available & (reliability: 1290.0) & (original description: Putative HXK1, Description = Hexokinase-1, PFAM = PF00349;PF03727)' T '2.2.1.4' 'major CHO metabolism.degradation.sucrose.hexokinase' 'niben101scf02417_669177-680037' '(at4g37840 : 476.0) Encodes a putative hexokinase.; hexokinase-like 3 (HKL3); CONTAINS InterPro DOMAIN/s: Hexokinase, N-terminal (InterPro:IPR022672), Hexokinase, C-terminal (InterPro:IPR022673), Hexokinase (InterPro:IPR001312); BEST Arabidopsis thaliana protein match is: hexokinase 1 (TAIR:AT4G29130.1); Has 2260 Blast hits to 1998 proteins in 311 species: Archae - 0; Bacteria - 87; Metazoa - 1224; Fungi - 560; Plants - 263; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (q9sek3|hxk1_spiol : 403.0) Hexokinase-1 (EC 2.7.1.1) (SoHxK1) - Spinacia oleracea (Spinach) & (gnl|cdd|36583 : 380.0) no description available & (gnl|cdd|34631 : 205.0) no description available & (reliability: 952.0) & (original description: Putative hxk2, Description = Phosphotransferase, PFAM = PF00349;PF03727)' T '2.2.1.4' 'major CHO metabolism.degradation.sucrose.hexokinase' 'niben101scf06509_244858-250841' '(at2g19860 : 730.0) Encodes a protein with hexokinase activity (AtHXK2) and acts as a sensor for plant sugar responses.; hexokinase 2 (HXK2); CONTAINS InterPro DOMAIN/s: Hexokinase, N-terminal (InterPro:IPR022672), Hexokinase, conserved site (InterPro:IPR019807), Hexokinase, C-terminal (InterPro:IPR022673), Hexokinase (InterPro:IPR001312); BEST Arabidopsis thaliana protein match is: hexokinase 1 (TAIR:AT4G29130.1); Has 2393 Blast hits to 2115 proteins in 319 species: Archae - 0; Bacteria - 88; Metazoa - 1275; Fungi - 598; Plants - 290; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (q9sek3|hxk1_spiol : 709.0) Hexokinase-1 (EC 2.7.1.1) (SoHxK1) - Spinacia oleracea (Spinach) & (gnl|cdd|36583 : 535.0) no description available & (gnl|cdd|34631 : 345.0) no description available & (reliability: 1460.0) & (original description: Putative HXK2, Description = Hexokinase-2, PFAM = PF00349;PF03727)' T '2.2.1.4' 'major CHO metabolism.degradation.sucrose.hexokinase' 'niben101scf10650_276003-283135' '(q9sek2|hxk1_tobac : 881.0) Hexokinase-1 (EC 2.7.1.1) (NtHxK1) - Nicotiana tabacum (Common tobacco) & (at2g19860 : 646.0) Encodes a protein with hexokinase activity (AtHXK2) and acts as a sensor for plant sugar responses.; hexokinase 2 (HXK2); CONTAINS InterPro DOMAIN/s: Hexokinase, N-terminal (InterPro:IPR022672), Hexokinase, conserved site (InterPro:IPR019807), Hexokinase, C-terminal (InterPro:IPR022673), Hexokinase (InterPro:IPR001312); BEST Arabidopsis thaliana protein match is: hexokinase 1 (TAIR:AT4G29130.1); Has 2393 Blast hits to 2115 proteins in 319 species: Archae - 0; Bacteria - 88; Metazoa - 1275; Fungi - 598; Plants - 290; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (gnl|cdd|36583 : 538.0) no description available & (gnl|cdd|34631 : 332.0) no description available & (reliability: 1292.0) & (original description: Putative HXK1, Description = Hexokinase-1, PFAM = PF00349;PF03727)' T '2.2.1.4' 'major CHO metabolism.degradation.sucrose.hexokinase' 'niben101scf12320_535065-544281' '(at1g50460 : 577.0) hexokinase-like 1 (HKL1); FUNCTIONS IN: hexokinase activity, ATP binding; INVOLVED IN: response to salt stress, response to cold, response to osmotic stress; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hexokinase, N-terminal (InterPro:IPR022672), Hexokinase, C-terminal (InterPro:IPR022673), Hexokinase (InterPro:IPR001312); BEST Arabidopsis thaliana protein match is: Hexokinase (TAIR:AT3G20040.1); Has 2396 Blast hits to 2128 proteins in 324 species: Archae - 0; Bacteria - 92; Metazoa - 1286; Fungi - 598; Plants - 287; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (q2knb4|hxk3_orysa : 523.0) Hexokinase-3 (EC 2.7.1.1) (Hexokinase-8) - Oryza sativa (Rice) & (gnl|cdd|36583 : 509.0) no description available & (gnl|cdd|34631 : 311.0) no description available & (reliability: 1154.0) & (original description: Putative hxk1, Description = Phosphotransferase, PFAM = PF00349;PF03727)' T '2.2.1.5' 'major CHO metabolism.degradation.sucrose.Susy' 'nbv0.5scaffold1372_373659-379938' '(p49039|sus2_soltu : 1588.0) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase) (SS65) - Solanum tuberosum (Potato) & (at3g43190 : 1347.0) Encodes a protein with sucrose synthase activity (SUS4).; sucrose synthase 4 (SUS4); FUNCTIONS IN: UDP-glycosyltransferase activity, sucrose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: sucrose biosynthetic process, response to hypoxia; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose synthase, plant/cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 1 (TAIR:AT5G20830.2); Has 7692 Blast hits to 7689 proteins in 1582 species: Archae - 293; Bacteria - 4740; Metazoa - 106; Fungi - 81; Plants - 801; Viruses - 0; Other Eukaryotes - 1671 (source: NCBI BLink). & (gnl|cdd|64713 : 1007.0) no description available & (gnl|cdd|36071 : 461.0) no description available & (reliability: 2694.0) & (original description: Putative ss2, Description = Sucrose synthase, PFAM = PF00534;PF00862)' T '2.2.1.5' 'major CHO metabolism.degradation.sucrose.Susy' 'niben101scf00887_99760-105451' '(at1g73370 : 1207.0) Encodes a protein with sucrose synthase activity (SUS6).; sucrose synthase 6 (SUS6); CONTAINS InterPro DOMAIN/s: Sucrose synthase, plant/cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 5 (TAIR:AT5G37180.1). & (o24301|sus2_pea : 943.0) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 2) - Pisum sativum (Garden pea) & (gnl|cdd|64713 : 694.0) no description available & (gnl|cdd|36071 : 444.0) no description available & (reliability: 2414.0) & (original description: Putative SUS6, Description = Sucrose synthase 6, PFAM = PF00862;PF00534)' T '2.2.1.5' 'major CHO metabolism.degradation.sucrose.Susy' 'niben101scf01623_123627-136871' '(o24301|sus2_pea : 1417.0) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 2) - Pisum sativum (Garden pea) & (at4g02280 : 1395.0) Encodes a protein with sucrose synthase activity (SUS3). It appears to be important for sucrose metabolism in developing seeds, especially during the late maturation phase, about 18 days after flowering.; sucrose synthase 3 (SUS3); CONTAINS InterPro DOMAIN/s: Sucrose synthase, plant/cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 2 (TAIR:AT5G49190.1); Has 6506 Blast hits to 6505 proteins in 1621 species: Archae - 256; Bacteria - 4351; Metazoa - 95; Fungi - 50; Plants - 824; Viruses - 0; Other Eukaryotes - 930 (source: NCBI BLink). & (gnl|cdd|64713 : 978.0) no description available & (gnl|cdd|36071 : 467.0) no description available & (reliability: 2790.0) & (original description: Putative sus2, Description = Sucrose synthase, PFAM = PF00534;PF00862)' T '2.2.1.5' 'major CHO metabolism.degradation.sucrose.Susy' 'niben101scf04910_172562-178950' '(p49039|sus2_soltu : 1588.0) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase) (SS65) - Solanum tuberosum (Potato) & (at3g43190 : 1351.0) Encodes a protein with sucrose synthase activity (SUS4).; sucrose synthase 4 (SUS4); FUNCTIONS IN: UDP-glycosyltransferase activity, sucrose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: sucrose biosynthetic process, response to hypoxia; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose synthase, plant/cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 1 (TAIR:AT5G20830.2); Has 7692 Blast hits to 7689 proteins in 1582 species: Archae - 293; Bacteria - 4740; Metazoa - 106; Fungi - 81; Plants - 801; Viruses - 0; Other Eukaryotes - 1671 (source: NCBI BLink). & (gnl|cdd|64713 : 1009.0) no description available & (gnl|cdd|36071 : 465.0) no description available & (reliability: 2702.0) & (original description: Putative ss2, Description = Sucrose synthase, PFAM = PF00862;PF00534)' T '2.2.1.5' 'major CHO metabolism.degradation.sucrose.Susy' 'niben101scf06757_61560-67596' '(at1g73370 : 1223.0) Encodes a protein with sucrose synthase activity (SUS6).; sucrose synthase 6 (SUS6); CONTAINS InterPro DOMAIN/s: Sucrose synthase, plant/cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 5 (TAIR:AT5G37180.1). & (o24301|sus2_pea : 967.0) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 2) - Pisum sativum (Garden pea) & (gnl|cdd|64713 : 690.0) no description available & (gnl|cdd|36071 : 427.0) no description available & (reliability: 2446.0) & (original description: Putative SUS7, Description = Sucrose synthase 7, PFAM = PF00862;PF00534)' T '2.2.1.5' 'major CHO metabolism.degradation.sucrose.Susy' 'niben101scf06933_92671-99127' '(p10691|sus1_soltu : 1573.0) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase) (SS16) - Solanum tuberosum (Potato) & (at3g43190 : 1367.0) Encodes a protein with sucrose synthase activity (SUS4).; sucrose synthase 4 (SUS4); FUNCTIONS IN: UDP-glycosyltransferase activity, sucrose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: sucrose biosynthetic process, response to hypoxia; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose synthase, plant/cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 1 (TAIR:AT5G20830.2); Has 7692 Blast hits to 7689 proteins in 1582 species: Archae - 293; Bacteria - 4740; Metazoa - 106; Fungi - 81; Plants - 801; Viruses - 0; Other Eukaryotes - 1671 (source: NCBI BLink). & (gnl|cdd|64713 : 1020.0) no description available & (gnl|cdd|36071 : 471.0) no description available & (reliability: 2734.0) & (original description: Putative ss2, Description = Sucrose synthase, PFAM = PF00534;PF00862)' T '2.2.1.5' 'major CHO metabolism.degradation.sucrose.Susy' 'niben101scf09112_377294-390199' '(p49039|sus2_soltu : 488.0) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase) (SS65) - Solanum tuberosum (Potato) & (at5g20830 : 458.0) Encodes a protein with sucrose synthase activity (SUS1).; sucrose synthase 1 (SUS1); FUNCTIONS IN: UDP-glycosyltransferase activity, sucrose synthase activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose synthase, plant/cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 4 (TAIR:AT3G43190.1); Has 8160 Blast hits to 8157 proteins in 1636 species: Archae - 294; Bacteria - 5212; Metazoa - 101; Fungi - 72; Plants - 800; Viruses - 0; Other Eukaryotes - 1681 (source: NCBI BLink). & (gnl|cdd|64713 : 429.0) no description available & (gnl|cdd|36071 : 178.0) no description available & (reliability: 916.0) & (original description: Putative ss2, Description = Sucrose synthase, PFAM = PF00862)' T '2.2.1.5' 'major CHO metabolism.degradation.sucrose.Susy' 'niben101scf10157_573230-579544' '(p10691|sus1_soltu : 1216.0) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase) (SS16) - Solanum tuberosum (Potato) & (at3g43190 : 1169.0) Encodes a protein with sucrose synthase activity (SUS4).; sucrose synthase 4 (SUS4); FUNCTIONS IN: UDP-glycosyltransferase activity, sucrose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: sucrose biosynthetic process, response to hypoxia; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose synthase, plant/cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 1 (TAIR:AT5G20830.2); Has 7692 Blast hits to 7689 proteins in 1582 species: Archae - 293; Bacteria - 4740; Metazoa - 106; Fungi - 81; Plants - 801; Viruses - 0; Other Eukaryotes - 1671 (source: NCBI BLink). & (gnl|cdd|64713 : 840.0) no description available & (gnl|cdd|36071 : 426.0) no description available & (reliability: 2338.0) & (original description: Putative ss2, Description = Sucrose synthase, PFAM = PF00534;PF00862)' T '2.2.1.99' 'major CHO metabolism.degradation.sucrose.misc' 'nbv0.3scaffold38779_6911-15587' '(at3g27570 : 331.0) Sucrase/ferredoxin-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Sucraseferredoxin-like (InterPro:IPR009737), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Sucrase/ferredoxin-like family protein (TAIR:AT5G40510.1); Has 487 Blast hits to 487 proteins in 162 species: Archae - 6; Bacteria - 90; Metazoa - 0; Fungi - 283; Plants - 71; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|70464 : 215.0) no description available & (reliability: 596.0) & (original description: Putative At3g27570, Description = Sucrase/ferredoxin-like protein, PFAM = PF06999)' T '2.2.1.99' 'major CHO metabolism.degradation.sucrose.misc' 'niben101scf01849_529796-542112' '(at4g26620 : 464.0) Sucrase/ferredoxin-like family protein; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Sucraseferredoxin-like (InterPro:IPR009737), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Sucrase/ferredoxin-like family protein (TAIR:AT5G55900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|70464 : 216.0) no description available & (reliability: 928.0) & (original description: Putative ferredoxin homolog, Description = Clostridium pasteurianum ferredoxin homolog, PFAM = PF06999)' T '2.2.1.1001' 'major CHO metabolism.degradation.sucrose' 'fructose' 'major CHO metabolism.synthesis.sucrose; major CHO metabolism.degradation.sucrose' M '2.2.1.1002' 'major CHO metabolism.degradation.sucrose' 'glucose' 'cell wall degradation; major CHO metabolism.synthesis.sucrose; major CHO metabolism.degradation.starch' M '2.2.2' 'major CHO metabolism.degradation.starch' '' '' '2.2.2.1' 'major CHO metabolism.degradation.starch.starch cleavage' 'niben101scf00239_520365-555771' '(at3g23640 : 1533.0) heteroglycan glucosidase 1 (HGL1); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 31 protein (TAIR:AT5G63840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85212 : 487.0) no description available & (gnl|cdd|36284 : 420.0) no description available & (q653v7|aglu_orysa : 307.0) Probable alpha-glucosidase Os06g0675700 precursor (EC 3.2.1.20) (Maltase) - Oryza sativa (Rice) & (reliability: 3066.0) & (original description: Putative BnaCnng35950D, Description = BnaCnng35950D protein, PFAM = PF17137;PF01055;PF13802)' T '2.2.2.1.1' 'major CHO metabolism.degradation.starch.starch cleavage.alpha amylase' 'nbv0.3scaffold22346_5908-25332' '(at1g69830 : 1186.0) Encodes a plastid-localized α-amylase. Expression is reduced in the SEX4 mutant. Loss of function mutations show normal diurnal pattern of starch accumulation/degradation. Expression follows circadian rhythms.; alpha-amylase-like 3 (AMY3); FUNCTIONS IN: alpha-amylase activity; INVOLVED IN: circadian rhythm, starch catabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047), Alpha-amylase, C-terminal beta-sheet (InterPro:IPR012850); BEST Arabidopsis thaliana protein match is: alpha-amylase-like 2 (TAIR:AT1G76130.1); Has 11240 Blast hits to 11194 proteins in 2094 species: Archae - 95; Bacteria - 8555; Metazoa - 677; Fungi - 729; Plants - 646; Viruses - 0; Other Eukaryotes - 538 (source: NCBI BLink). & (p27934|amy3e_orysa : 390.0) Alpha-amylase isozyme 3E precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) - Oryza sativa (Rice) & (gnl|cdd|35692 : 233.0) no description available & (gnl|cdd|84544 : 177.0) no description available & (reliability: 2372.0) & (original description: Putative AMY2, Description = Probable alpha-amylase 2, PFAM = PF07821;PF00128)' T '2.2.2.1.1' 'major CHO metabolism.degradation.starch.starch cleavage.alpha amylase' 'nbv0.5scaffold98_738586-827909' '(at4g25000 : 456.0) Predicted to be secreted protein based on signalP prediction. Involved in starch mobilization. Mutants are defective in alpha-amylase activity. (Note: AMY1 has been found in the literature to be referred to as AMY3, which is not to be confused with AMY3/At1g69830).; alpha-amylase-like (AMY1); FUNCTIONS IN: alpha-amylase activity; INVOLVED IN: response to gibberellin stimulus, response to abscisic acid stimulus; LOCATED IN: extracellular region, apoplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 13 (InterPro:IPR006046), Alpha-amylase, plant (InterPro:IPR013775), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047), Alpha-amylase, C-terminal beta-sheet (InterPro:IPR012850); BEST Arabidopsis thaliana protein match is: alpha-amylase-like 2 (TAIR:AT1G76130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p04063|amy2_horvu : 451.0) Alpha-amylase type B isozyme precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) (AMY2-2) (High pI alpha-amylase) - Hordeum vulgare (Barley) & (gnl|cdd|84544 : 177.0) no description available & (gnl|cdd|35692 : 148.0) no description available & (reliability: 912.0) & (original description: Putative amy1, Description = Alpha-amylase, PFAM = PF00128;PF07821)' T '2.2.2.1.1' 'major CHO metabolism.degradation.starch.starch cleavage.alpha amylase' 'niben044scf00022950ctg001_1-2962' '(at1g76130 : 323.0) alpha-amylase, putative / 1,4-alpha-D-glucan glucanohydrolase, putative, strong similarity to alpha-amylase GI:7532799 from (Malus x domestica);contains Pfam profile PF00128: Alpha amylase, catalytic domain. Predicted to be secreted based on SignalP analysis.; alpha-amylase-like 2 (AMY2); FUNCTIONS IN: cation binding, catalytic activity, alpha-amylase activity, calcium ion binding; INVOLVED IN: carbohydrate metabolic process, glycogen catabolic process; LOCATED IN: extracellular region; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 13 (InterPro:IPR006046), Alpha-amylase, plant (InterPro:IPR013775), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047), Alpha-amylase, C-terminal beta-sheet (InterPro:IPR012850); BEST Arabidopsis thaliana protein match is: alpha-amylase-like 3 (TAIR:AT1G69830.1); Has 2455 Blast hits to 2450 proteins in 882 species: Archae - 39; Bacteria - 1348; Metazoa - 171; Fungi - 337; Plants - 494; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (p08117|amy3_wheat : 148.0) Alpha-amylase AMY3 precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) - Triticum aestivum (Wheat) & (gnl|cdd|35692 : 117.0) no description available & (gnl|cdd|84544 : 83.9) no description available & (reliability: 646.0) & (original description: Putative amy2, Description = Alpha-amylase, PFAM = PF00128)' T '2.2.2.1.1' 'major CHO metabolism.degradation.starch.starch cleavage.alpha amylase' 'niben101scf01493_21704-28533' '(at1g76130 : 664.0) alpha-amylase, putative / 1,4-alpha-D-glucan glucanohydrolase, putative, strong similarity to alpha-amylase GI:7532799 from (Malus x domestica);contains Pfam profile PF00128: Alpha amylase, catalytic domain. Predicted to be secreted based on SignalP analysis.; alpha-amylase-like 2 (AMY2); FUNCTIONS IN: cation binding, catalytic activity, alpha-amylase activity, calcium ion binding; INVOLVED IN: carbohydrate metabolic process, glycogen catabolic process; LOCATED IN: extracellular region; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 13 (InterPro:IPR006046), Alpha-amylase, plant (InterPro:IPR013775), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047), Alpha-amylase, C-terminal beta-sheet (InterPro:IPR012850); BEST Arabidopsis thaliana protein match is: alpha-amylase-like 3 (TAIR:AT1G69830.1); Has 2455 Blast hits to 2450 proteins in 882 species: Archae - 39; Bacteria - 1348; Metazoa - 171; Fungi - 337; Plants - 494; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (p04063|amy2_horvu : 365.0) Alpha-amylase type B isozyme precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) (AMY2-2) (High pI alpha-amylase) - Hordeum vulgare (Barley) & (gnl|cdd|35692 : 203.0) no description available & (gnl|cdd|84544 : 148.0) no description available & (reliability: 1328.0) & (original description: Putative AMY2, Description = Probable alpha-amylase 2, PFAM = PF07821;PF00128)' T '2.2.2.1.1' 'major CHO metabolism.degradation.starch.starch cleavage.alpha amylase' 'niben101scf01580_117632-124092' '(at1g76130 : 685.0) alpha-amylase, putative / 1,4-alpha-D-glucan glucanohydrolase, putative, strong similarity to alpha-amylase GI:7532799 from (Malus x domestica);contains Pfam profile PF00128: Alpha amylase, catalytic domain. Predicted to be secreted based on SignalP analysis.; alpha-amylase-like 2 (AMY2); FUNCTIONS IN: cation binding, catalytic activity, alpha-amylase activity, calcium ion binding; INVOLVED IN: carbohydrate metabolic process, glycogen catabolic process; LOCATED IN: extracellular region; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 13 (InterPro:IPR006046), Alpha-amylase, plant (InterPro:IPR013775), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047), Alpha-amylase, C-terminal beta-sheet (InterPro:IPR012850); BEST Arabidopsis thaliana protein match is: alpha-amylase-like 3 (TAIR:AT1G69830.1); Has 2455 Blast hits to 2450 proteins in 882 species: Archae - 39; Bacteria - 1348; Metazoa - 171; Fungi - 337; Plants - 494; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (p04063|amy2_horvu : 367.0) Alpha-amylase type B isozyme precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) (AMY2-2) (High pI alpha-amylase) - Hordeum vulgare (Barley) & (gnl|cdd|35692 : 213.0) no description available & (gnl|cdd|84544 : 152.0) no description available & (reliability: 1370.0) & (original description: Putative AMY2, Description = Probable alpha-amylase 2, PFAM = PF07821;PF00128)' T '2.2.2.1.1' 'major CHO metabolism.degradation.starch.starch cleavage.alpha amylase' 'niben101scf06233_209627-226535' '(at1g69830 : 518.0) Encodes a plastid-localized α-amylase. Expression is reduced in the SEX4 mutant. Loss of function mutations show normal diurnal pattern of starch accumulation/degradation. Expression follows circadian rhythms.; alpha-amylase-like 3 (AMY3); FUNCTIONS IN: alpha-amylase activity; INVOLVED IN: circadian rhythm, starch catabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047), Alpha-amylase, C-terminal beta-sheet (InterPro:IPR012850); BEST Arabidopsis thaliana protein match is: alpha-amylase-like 2 (TAIR:AT1G76130.1); Has 11240 Blast hits to 11194 proteins in 2094 species: Archae - 95; Bacteria - 8555; Metazoa - 677; Fungi - 729; Plants - 646; Viruses - 0; Other Eukaryotes - 538 (source: NCBI BLink). & (p27934|amy3e_orysa : 408.0) Alpha-amylase isozyme 3E precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) - Oryza sativa (Rice) & (gnl|cdd|35692 : 197.0) no description available & (gnl|cdd|84544 : 187.0) no description available & (reliability: 1036.0) & (original description: Putative AMY2, Description = Probable alpha-amylase 2, PFAM = PF00128;PF07821)' T '2.2.2.1.1' 'major CHO metabolism.degradation.starch.starch cleavage.alpha amylase' 'niben101scf09644_55686-73058' '(at1g69830 : 1210.0) Encodes a plastid-localized α-amylase. Expression is reduced in the SEX4 mutant. Loss of function mutations show normal diurnal pattern of starch accumulation/degradation. Expression follows circadian rhythms.; alpha-amylase-like 3 (AMY3); FUNCTIONS IN: alpha-amylase activity; INVOLVED IN: circadian rhythm, starch catabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047), Alpha-amylase, C-terminal beta-sheet (InterPro:IPR012850); BEST Arabidopsis thaliana protein match is: alpha-amylase-like 2 (TAIR:AT1G76130.1); Has 11240 Blast hits to 11194 proteins in 2094 species: Archae - 95; Bacteria - 8555; Metazoa - 677; Fungi - 729; Plants - 646; Viruses - 0; Other Eukaryotes - 538 (source: NCBI BLink). & (p27934|amy3e_orysa : 388.0) Alpha-amylase isozyme 3E precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) - Oryza sativa (Rice) & (gnl|cdd|35692 : 232.0) no description available & (gnl|cdd|84544 : 175.0) no description available & (reliability: 2420.0) & (original description: Putative AMY3, Description = Alpha-amylase 3, chloroplastic, PFAM = PF07821;PF00128)' T '2.2.2.1.1' 'major CHO metabolism.degradation.starch.starch cleavage.alpha amylase' 'niben101scf13798_8159-12433' '(p04063|amy2_horvu : 588.0) Alpha-amylase type B isozyme precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) (AMY2-2) (High pI alpha-amylase) - Hordeum vulgare (Barley) & (at4g25000 : 582.0) Predicted to be secreted protein based on signalP prediction. Involved in starch mobilization. Mutants are defective in alpha-amylase activity. (Note: AMY1 has been found in the literature to be referred to as AMY3, which is not to be confused with AMY3/At1g69830).; alpha-amylase-like (AMY1); FUNCTIONS IN: alpha-amylase activity; INVOLVED IN: response to gibberellin stimulus, response to abscisic acid stimulus; LOCATED IN: extracellular region, apoplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 13 (InterPro:IPR006046), Alpha-amylase, plant (InterPro:IPR013775), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047), Alpha-amylase, C-terminal beta-sheet (InterPro:IPR012850); BEST Arabidopsis thaliana protein match is: alpha-amylase-like 2 (TAIR:AT1G76130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84544 : 202.0) no description available & (gnl|cdd|35692 : 188.0) no description available & (reliability: 1164.0) & (original description: Putative amy1, Description = Alpha-amylase, PFAM = PF07821;PF00128)' T '2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'nbv0.5scaffold2484_247704-252876' '(at5g18670 : 536.0) putative beta-amylase BMY3 (BMY3); beta-amylase 3 (BMY3); FUNCTIONS IN: cation binding, beta-amylase activity, catalytic activity; INVOLVED IN: cellulose biosynthetic process, carbohydrate metabolic process, polysaccharide catabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: chloroplast beta-amylase (TAIR:AT4G17090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o64407|amyb_vigun : 271.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Vigna unguiculata (Cowpea) & (gnl|cdd|85413 : 227.0) no description available & (reliability: 1072.0) & (original description: Putative bmy1, Description = Beta-amylase, PFAM = PF01373)' T '2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben044scf00002906ctg005_12129-17913' '(at4g17090 : 821.0) Encodes a beta-amylase targeted to the chloroplast. Transgenic BMY8 RNAi lines fail to accumulate maltose during cold shock suggesting that maltose accumulation coincides with BMY8 expression. Apart from maltose, the sugar content of the RNAi lines were similar to wildtype (glucose and sucrose unaffected).; chloroplast beta-amylase (CT-BMY); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-amylase 1 (TAIR:AT3G23920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85413 : 469.0) no description available & (o22585|amyb_medsa : 463.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Medicago sativa (Alfalfa) & (reliability: 1642.0) & (original description: Putative BAM3, Description = Beta-amylase 3, chloroplastic, PFAM = PF01373)' T '2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben044scf00004712ctg002_1-4998' '(at3g23920 : 872.0) Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3.; beta-amylase 1 (BAM1); FUNCTIONS IN: beta-amylase activity; INVOLVED IN: response to water deprivation, starch catabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: chloroplast beta-amylase (TAIR:AT4G17090.1); Has 845 Blast hits to 843 proteins in 168 species: Archae - 0; Bacteria - 89; Metazoa - 0; Fungi - 0; Plants - 691; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (o22585|amyb_medsa : 450.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Medicago sativa (Alfalfa) & (gnl|cdd|85413 : 388.0) no description available & (reliability: 1744.0) & (original description: Putative BAM1, Description = Beta-amylase 1, chloroplastic, PFAM = PF01373)' T '2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben044scf00008910ctg005_1-4776' '(at4g17090 : 808.0) Encodes a beta-amylase targeted to the chloroplast. Transgenic BMY8 RNAi lines fail to accumulate maltose during cold shock suggesting that maltose accumulation coincides with BMY8 expression. Apart from maltose, the sugar content of the RNAi lines were similar to wildtype (glucose and sucrose unaffected).; chloroplast beta-amylase (CT-BMY); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-amylase 1 (TAIR:AT3G23920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85413 : 465.0) no description available & (o22585|amyb_medsa : 448.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Medicago sativa (Alfalfa) & (reliability: 1616.0) & (original description: Putative BAM1, Description = Beta-amylase, PFAM = PF01373)' T '2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben044scf00012929ctg009_16171-21148' '(at4g17090 : 819.0) Encodes a beta-amylase targeted to the chloroplast. Transgenic BMY8 RNAi lines fail to accumulate maltose during cold shock suggesting that maltose accumulation coincides with BMY8 expression. Apart from maltose, the sugar content of the RNAi lines were similar to wildtype (glucose and sucrose unaffected).; chloroplast beta-amylase (CT-BMY); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-amylase 1 (TAIR:AT3G23920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85413 : 465.0) no description available & (o22585|amyb_medsa : 449.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Medicago sativa (Alfalfa) & (reliability: 1638.0) & (original description: Putative bmy2, Description = Beta-amylase, PFAM = PF01373)' T '2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben044scf00015937ctg007_3906-7499' '(at2g45880 : 368.0) beta-amylase 7 (BAM7); FUNCTIONS IN: cation binding, beta-amylase activity, catalytic activity; INVOLVED IN: cellulose biosynthetic process, carbohydrate metabolic process, polysaccharide catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: beta-amylase 2 (TAIR:AT4G00490.1); Has 965 Blast hits to 963 proteins in 157 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 3; Plants - 810; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (o22585|amyb_medsa : 163.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Medicago sativa (Alfalfa) & (gnl|cdd|69223 : 135.0) no description available & (reliability: 736.0) & (original description: Putative bmy2, Description = Beta-amylase, PFAM = PF01373;PF05687)' T '2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben101scf00274_102235-107332' '(at3g23920 : 867.0) Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3.; beta-amylase 1 (BAM1); FUNCTIONS IN: beta-amylase activity; INVOLVED IN: response to water deprivation, starch catabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: chloroplast beta-amylase (TAIR:AT4G17090.1); Has 845 Blast hits to 843 proteins in 168 species: Archae - 0; Bacteria - 89; Metazoa - 0; Fungi - 0; Plants - 691; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (o22585|amyb_medsa : 450.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Medicago sativa (Alfalfa) & (gnl|cdd|85413 : 387.0) no description available & (reliability: 1734.0) & (original description: Putative BAM1, Description = Beta-amylase 1, chloroplastic, PFAM = PF01373)' T '2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben101scf03282_276431-279254' '(gnl|cdd|69223 : 85.9) no description available & (at2g45880 : 85.5) beta-amylase 7 (BAM7); FUNCTIONS IN: cation binding, beta-amylase activity, catalytic activity; INVOLVED IN: cellulose biosynthetic process, carbohydrate metabolic process, polysaccharide catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: beta-amylase 2 (TAIR:AT4G00490.1); Has 965 Blast hits to 963 proteins in 157 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 3; Plants - 810; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative BAM6, Description = Beta-amylase, PFAM = PF05687)' T '2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben101scf04981_81613-90767' '(at2g45880 : 854.0) beta-amylase 7 (BAM7); FUNCTIONS IN: cation binding, beta-amylase activity, catalytic activity; INVOLVED IN: cellulose biosynthetic process, carbohydrate metabolic process, polysaccharide catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: beta-amylase 2 (TAIR:AT4G00490.1); Has 965 Blast hits to 963 proteins in 157 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 3; Plants - 810; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (o22585|amyb_medsa : 432.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Medicago sativa (Alfalfa) & (gnl|cdd|85413 : 313.0) no description available & (reliability: 1708.0) & (original description: Putative BAM7, Description = Beta-amylase 7, PFAM = PF01373;PF05687)' T '2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben101scf05286_97749-103546' '(p10538|amyb_soybn : 764.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Glycine max (Soybean) & (at2g32290 : 704.0) beta-amylase 6 (BAM6); FUNCTIONS IN: cation binding, beta-amylase activity, catalytic activity; INVOLVED IN: cellulose biosynthetic process, carbohydrate metabolic process, polysaccharide catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-amylase 5 (TAIR:AT4G15210.1); Has 842 Blast hits to 841 proteins in 166 species: Archae - 0; Bacteria - 87; Metazoa - 0; Fungi - 0; Plants - 690; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|85413 : 339.0) no description available & (reliability: 1408.0) & (original description: Putative BMY1, Description = Beta-amylase, PFAM = PF01373)' T '2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben101scf07346_519007-528116' '(at5g45300 : 804.0) beta-amylase 2 (BMY2); FUNCTIONS IN: cation binding, beta-amylase activity, catalytic activity; INVOLVED IN: carbohydrate metabolic process, polysaccharide catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: beta-amylase 7 (TAIR:AT2G45880.1); Has 1274 Blast hits to 1254 proteins in 201 species: Archae - 0; Bacteria - 92; Metazoa - 229; Fungi - 10; Plants - 856; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (p10538|amyb_soybn : 377.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Glycine max (Soybean) & (gnl|cdd|85413 : 247.0) no description available & (reliability: 1608.0) & (original description: Putative BAM8, Description = Beta-amylase 8, PFAM = PF01373;PF05687)' T '2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben101scf10158_160242-167600' '(at4g17090 : 717.0) Encodes a beta-amylase targeted to the chloroplast. Transgenic BMY8 RNAi lines fail to accumulate maltose during cold shock suggesting that maltose accumulation coincides with BMY8 expression. Apart from maltose, the sugar content of the RNAi lines were similar to wildtype (glucose and sucrose unaffected).; chloroplast beta-amylase (CT-BMY); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-amylase 1 (TAIR:AT3G23920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85413 : 383.0) no description available & (o22585|amyb_medsa : 379.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Medicago sativa (Alfalfa) & (reliability: 1434.0) & (original description: Putative BAM3, Description = Beta-amylase 3, chloroplastic, PFAM = PF01373)' T '2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben101scf10196_156147-182695' '(at2g45880 : 831.0) beta-amylase 7 (BAM7); FUNCTIONS IN: cation binding, beta-amylase activity, catalytic activity; INVOLVED IN: cellulose biosynthetic process, carbohydrate metabolic process, polysaccharide catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: beta-amylase 2 (TAIR:AT4G00490.1); Has 965 Blast hits to 963 proteins in 157 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 3; Plants - 810; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (p10538|amyb_soybn : 421.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Glycine max (Soybean) & (gnl|cdd|85413 : 307.0) no description available & (reliability: 1662.0) & (original description: Putative BAM7, Description = Beta-amylase 7, PFAM = PF01373;PF05687)' T '2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben101scf11483_32509-37560' '(at3g23920 : 782.0) Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3.; beta-amylase 1 (BAM1); FUNCTIONS IN: beta-amylase activity; INVOLVED IN: response to water deprivation, starch catabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: chloroplast beta-amylase (TAIR:AT4G17090.1); Has 845 Blast hits to 843 proteins in 168 species: Archae - 0; Bacteria - 89; Metazoa - 0; Fungi - 0; Plants - 691; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (o22585|amyb_medsa : 451.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Medicago sativa (Alfalfa) & (gnl|cdd|85413 : 374.0) no description available & (reliability: 1564.0) & (original description: Putative BAM1, Description = Beta-amylase 1, chloroplastic, PFAM = PF01373)' T '2.2.2.1.2' 'major CHO metabolism.degradation.starch.starch cleavage.beta amylase' 'niben101scf14394_226116-232669' '(at3g23920 : 437.0) Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3.; beta-amylase 1 (BAM1); FUNCTIONS IN: beta-amylase activity; INVOLVED IN: response to water deprivation, starch catabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: chloroplast beta-amylase (TAIR:AT4G17090.1); Has 845 Blast hits to 843 proteins in 168 species: Archae - 0; Bacteria - 89; Metazoa - 0; Fungi - 0; Plants - 691; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (o22585|amyb_medsa : 320.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Medicago sativa (Alfalfa) & (gnl|cdd|85413 : 282.0) no description available & (reliability: 874.0) & (original description: Putative BAM3, Description = Beta-amylase, PFAM = PF01373)' T '2.2.2.2' 'major CHO metabolism.degradation.starch.starch phosphorylase' 'nbv0.5scaffold2086_357360-373313' '(p32811|phsh_soltu : 1589.0) Alpha-glucan phosphorylase, H isozyme (EC 2.4.1.1) (Starch phosphorylase H) - Solanum tuberosum (Potato) & (at3g46970 : 1429.0) Encodes a cytosolic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for branched polysaccharides, such as glycogen.; alpha-glucan phosphorylase 2 (PHS2); FUNCTIONS IN: phosphorylase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cadmium ion, response to water deprivation; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 35 (InterPro:IPR000811), Glycogen/starch/alpha-glucan phosphorylase (InterPro:IPR011833); BEST Arabidopsis thaliana protein match is: Glycosyl transferase, family 35 (TAIR:AT3G29320.1); Has 5792 Blast hits to 5741 proteins in 1741 species: Archae - 74; Bacteria - 3953; Metazoa - 555; Fungi - 138; Plants - 232; Viruses - 2; Other Eukaryotes - 838 (source: NCBI BLink). & (gnl|cdd|37310 : 1234.0) no description available & (gnl|cdd|84706 : 1108.0) no description available & (reliability: 2858.0) & (original description: Putative glpD, Description = Alpha-1,4 glucan phosphorylase, PFAM = PF00343)' T '2.2.2.2' 'major CHO metabolism.degradation.starch.starch phosphorylase' 'niben101scf00978_820471-834577' '(p32811|phsh_soltu : 1585.0) Alpha-glucan phosphorylase, H isozyme (EC 2.4.1.1) (Starch phosphorylase H) - Solanum tuberosum (Potato) & (at3g46970 : 1430.0) Encodes a cytosolic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for branched polysaccharides, such as glycogen.; alpha-glucan phosphorylase 2 (PHS2); FUNCTIONS IN: phosphorylase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cadmium ion, response to water deprivation; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 35 (InterPro:IPR000811), Glycogen/starch/alpha-glucan phosphorylase (InterPro:IPR011833); BEST Arabidopsis thaliana protein match is: Glycosyl transferase, family 35 (TAIR:AT3G29320.1); Has 5792 Blast hits to 5741 proteins in 1741 species: Archae - 74; Bacteria - 3953; Metazoa - 555; Fungi - 138; Plants - 232; Viruses - 2; Other Eukaryotes - 838 (source: NCBI BLink). & (gnl|cdd|37310 : 1229.0) no description available & (gnl|cdd|84706 : 1105.0) no description available & (reliability: 2860.0) & (original description: Putative glpD, Description = Alpha-1,4 glucan phosphorylase, PFAM = PF00343)' T '2.2.2.2' 'major CHO metabolism.degradation.starch.starch phosphorylase' 'niben101scf02289_1020972-1031694' '(p04045|phsl1_soltu : 1721.0) Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplast precursor (EC 2.4.1.1) (Starch phosphorylase L-1) - Solanum tuberosum (Potato) & (at3g29320 : 1437.0) Encodes a plastidic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for maltooligosaccharides, such as maltoheptaose.; Glycosyl transferase, family 35; FUNCTIONS IN: phosphorylase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to water deprivation, response to temperature stimulus; LOCATED IN: chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch/alpha-glucan phosphorylase (InterPro:IPR011833), Glycosyl transferase, family 35 (InterPro:IPR000811); BEST Arabidopsis thaliana protein match is: alpha-glucan phosphorylase 2 (TAIR:AT3G46970.1); Has 6408 Blast hits to 5779 proteins in 1768 species: Archae - 99; Bacteria - 4542; Metazoa - 558; Fungi - 166; Plants - 202; Viruses - 2; Other Eukaryotes - 839 (source: NCBI BLink). & (gnl|cdd|37310 : 1027.0) no description available & (gnl|cdd|84706 : 564.0) no description available & (reliability: 2874.0) & (original description: Putative glgP, Description = Alpha-1,4 glucan phosphorylase, PFAM = PF00343;PF00343)' T '2.2.2.2' 'major CHO metabolism.degradation.starch.starch phosphorylase' 'niben101scf09107_135058-144558' '(p53535|phsl2_soltu : 1590.0) Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplast precursor (EC 2.4.1.1) (Starch phosphorylase L-2) - Solanum tuberosum (Potato) & (at3g29320 : 719.0) Encodes a plastidic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for maltooligosaccharides, such as maltoheptaose.; Glycosyl transferase, family 35; FUNCTIONS IN: phosphorylase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to water deprivation, response to temperature stimulus; LOCATED IN: chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch/alpha-glucan phosphorylase (InterPro:IPR011833), Glycosyl transferase, family 35 (InterPro:IPR000811); BEST Arabidopsis thaliana protein match is: alpha-glucan phosphorylase 2 (TAIR:AT3G46970.1); Has 6408 Blast hits to 5779 proteins in 1768 species: Archae - 99; Bacteria - 4542; Metazoa - 558; Fungi - 166; Plants - 202; Viruses - 2; Other Eukaryotes - 839 (source: NCBI BLink). & (gnl|cdd|37310 : 635.0) no description available & (gnl|cdd|84706 : 567.0) no description available & (reliability: 1438.0) & (original description: Putative glpD, Description = Alpha-1,4 glucan phosphorylase, PFAM = PF00343;PF00343)' T '2.2.2.2' 'major CHO metabolism.degradation.starch.starch phosphorylase' 'niben101scf11552_472481-487467' '(gnl|cdd|37310 : 1042.0) no description available & (gnl|cdd|84706 : 935.0) no description available & (p53537|phsh_vicfa : 798.0) Alpha-glucan phosphorylase, H isozyme (EC 2.4.1.1) (Starch phosphorylase H) - Vicia faba (Broad bean) & (at3g46970 : 791.0) Encodes a cytosolic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for branched polysaccharides, such as glycogen.; alpha-glucan phosphorylase 2 (PHS2); FUNCTIONS IN: phosphorylase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cadmium ion, response to water deprivation; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 35 (InterPro:IPR000811), Glycogen/starch/alpha-glucan phosphorylase (InterPro:IPR011833); BEST Arabidopsis thaliana protein match is: Glycosyl transferase, family 35 (TAIR:AT3G29320.1); Has 5792 Blast hits to 5741 proteins in 1741 species: Archae - 74; Bacteria - 3953; Metazoa - 555; Fungi - 138; Plants - 232; Viruses - 2; Other Eukaryotes - 838 (source: NCBI BLink). & (reliability: 1582.0) & (original description: Putative glpV, Description = Glycogen phosphorylase 1, PFAM = PF00343)' T '2.2.2.2' 'major CHO metabolism.degradation.starch.starch phosphorylase' 'niben101scf14799_198518-209584' '(p04045|phsl1_soltu : 1684.0) Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplast precursor (EC 2.4.1.1) (Starch phosphorylase L-1) - Solanum tuberosum (Potato) & (at3g29320 : 1434.0) Encodes a plastidic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for maltooligosaccharides, such as maltoheptaose.; Glycosyl transferase, family 35; FUNCTIONS IN: phosphorylase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to water deprivation, response to temperature stimulus; LOCATED IN: chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch/alpha-glucan phosphorylase (InterPro:IPR011833), Glycosyl transferase, family 35 (InterPro:IPR000811); BEST Arabidopsis thaliana protein match is: alpha-glucan phosphorylase 2 (TAIR:AT3G46970.1); Has 6408 Blast hits to 5779 proteins in 1768 species: Archae - 99; Bacteria - 4542; Metazoa - 558; Fungi - 166; Plants - 202; Viruses - 2; Other Eukaryotes - 839 (source: NCBI BLink). & (gnl|cdd|37310 : 635.0) no description available & (gnl|cdd|84706 : 567.0) no description available & (reliability: 2868.0) & (original description: Putative PHO2, Description = Alpha-1,4 glucan phosphorylase, PFAM = PF00343;PF00343)' T '2.2.2.3' 'major CHO metabolism.degradation.starch.glucan water dikinase' 'nbv0.3scaffold13956_25873-39276' '(at5g26570 : 1353.0) chloroplastidic phosphoglucan, water dikinase (PWD) which is required for normal degradation of leaf starch in Arabidopsis. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C3 position.; PHOSPHOGLUCAN WATER DIKINASE (PWD); FUNCTIONS IN: carbohydrate kinase activity, catalytic activity, phosphoglucan, water dikinase activity; INVOLVED IN: protein amino acid autophosphorylation, carbohydrate metabolic process, starch metabolic process, starch catabolic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044); BEST Arabidopsis thaliana protein match is: Pyruvate phosphate dikinase, PEP/pyruvate binding domain (TAIR:AT1G10760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q2qtc2|pwd_orysa : 1310.0) Phosphoglucan, water dikinase, chloroplast precursor (EC 2.7.9.5) - Oryza sativa (Rice) & (gnl|cdd|81898 : 136.0) no description available & (reliability: 2706.0) & (original description: Putative GWD3, Description = Phosphoglucan, water dikinase, chloroplastic, PFAM = PF00686;PF01326)' T '2.2.2.3' 'major CHO metabolism.degradation.starch.glucan water dikinase' 'nbv0.3scaffold51831_1-11684' '(q9awa5|gwd1_soltu : 2142.0) Alpha-glucan water dikinase, chloroplast precursor (EC 2.7.9.4) (EC 2.7.13.3) (Starch-related R1 protein) - Solanum tuberosum (Potato) & (at1g10760 : 1602.0) Encodes an α-glucan, water dikinase required for starch degradation. Involved in cold-induced freezing tolerance. Mutations that eliminate the GWD protein or affect the dikinase domain of the enzyme dramatically reduce both the amount of phosphate in the amylopectin and the rate of starch degradation. Mature leaves of these mutants accumulate amounts of starch up to seven times greater than those in wild-type leaves. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C6 position.; STARCH EXCESS 1 (SEX1); FUNCTIONS IN: protein binding, alpha-glucan, water dikinase activity; INVOLVED IN: cold acclimation, response to symbiotic fungus, response to trehalose stimulus, circadian rhythm, starch catabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate phosphate dikinase, PEP/pyruvate-binding (InterPro:IPR002192); BEST Arabidopsis thaliana protein match is: phosphoglucan, water dikinase (TAIR:AT4G24450.1); Has 2623 Blast hits to 2596 proteins in 1116 species: Archae - 196; Bacteria - 1989; Metazoa - 24; Fungi - 8; Plants - 221; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (gnl|cdd|85388 : 114.0) no description available & (reliability: 3204.0) & (original description: Putative GWD2, Description = Alpha-glucan water dikinase, PFAM = PF01326)' T '2.2.2.3' 'major CHO metabolism.degradation.starch.glucan water dikinase' 'niben044scf00053437ctg003_1-1334' '(at5g26570 : 145.0) chloroplastidic phosphoglucan, water dikinase (PWD) which is required for normal degradation of leaf starch in Arabidopsis. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C3 position.; PHOSPHOGLUCAN WATER DIKINASE (PWD); FUNCTIONS IN: carbohydrate kinase activity, catalytic activity, phosphoglucan, water dikinase activity; INVOLVED IN: protein amino acid autophosphorylation, carbohydrate metabolic process, starch metabolic process, starch catabolic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044); BEST Arabidopsis thaliana protein match is: Pyruvate phosphate dikinase, PEP/pyruvate binding domain (TAIR:AT1G10760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q2qtc2|pwd_orysa : 133.0) Phosphoglucan, water dikinase, chloroplast precursor (EC 2.7.9.5) - Oryza sativa (Rice) & (reliability: 290.0) & (original description: Putative GWD3, Description = Phosphoglucan, water dikinase, PFAM = )' T '2.2.2.3' 'major CHO metabolism.degradation.starch.glucan water dikinase' 'niben101scf00047_244829-253853' '(at5g26570 : 538.0) chloroplastidic phosphoglucan, water dikinase (PWD) which is required for normal degradation of leaf starch in Arabidopsis. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C3 position.; PHOSPHOGLUCAN WATER DIKINASE (PWD); FUNCTIONS IN: carbohydrate kinase activity, catalytic activity, phosphoglucan, water dikinase activity; INVOLVED IN: protein amino acid autophosphorylation, carbohydrate metabolic process, starch metabolic process, starch catabolic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044); BEST Arabidopsis thaliana protein match is: Pyruvate phosphate dikinase, PEP/pyruvate binding domain (TAIR:AT1G10760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q2qtc2|pwd_orysa : 508.0) Phosphoglucan, water dikinase, chloroplast precursor (EC 2.7.9.5) - Oryza sativa (Rice) & (reliability: 1076.0) & (original description: Putative GWD3, Description = Phosphoglucan, water dikinase, PFAM = )' T '2.2.2.3' 'major CHO metabolism.degradation.starch.glucan water dikinase' 'niben101scf00270_1593406-1607230' '(at5g26570 : 933.0) chloroplastidic phosphoglucan, water dikinase (PWD) which is required for normal degradation of leaf starch in Arabidopsis. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C3 position.; PHOSPHOGLUCAN WATER DIKINASE (PWD); FUNCTIONS IN: carbohydrate kinase activity, catalytic activity, phosphoglucan, water dikinase activity; INVOLVED IN: protein amino acid autophosphorylation, carbohydrate metabolic process, starch metabolic process, starch catabolic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044); BEST Arabidopsis thaliana protein match is: Pyruvate phosphate dikinase, PEP/pyruvate binding domain (TAIR:AT1G10760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q2qtc2|pwd_orysa : 902.0) Phosphoglucan, water dikinase, chloroplast precursor (EC 2.7.9.5) - Oryza sativa (Rice) & (gnl|cdd|81898 : 136.0) no description available & (reliability: 1866.0) & (original description: Putative GWD3, Description = Phosphoglucan, water dikinase, chloroplastic, PFAM = PF00686;PF01326)' T '2.2.2.3' 'major CHO metabolism.degradation.starch.glucan water dikinase' 'niben101scf02937_38428-59646' '(q9awa5|gwd1_soltu : 2531.0) Alpha-glucan water dikinase, chloroplast precursor (EC 2.7.9.4) (EC 2.7.13.3) (Starch-related R1 protein) - Solanum tuberosum (Potato) & (at1g10760 : 1650.0) Encodes an α-glucan, water dikinase required for starch degradation. Involved in cold-induced freezing tolerance. Mutations that eliminate the GWD protein or affect the dikinase domain of the enzyme dramatically reduce both the amount of phosphate in the amylopectin and the rate of starch degradation. Mature leaves of these mutants accumulate amounts of starch up to seven times greater than those in wild-type leaves. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C6 position.; STARCH EXCESS 1 (SEX1); FUNCTIONS IN: protein binding, alpha-glucan, water dikinase activity; INVOLVED IN: cold acclimation, response to symbiotic fungus, response to trehalose stimulus, circadian rhythm, starch catabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate phosphate dikinase, PEP/pyruvate-binding (InterPro:IPR002192); BEST Arabidopsis thaliana protein match is: phosphoglucan, water dikinase (TAIR:AT4G24450.1); Has 2623 Blast hits to 2596 proteins in 1116 species: Archae - 196; Bacteria - 1989; Metazoa - 24; Fungi - 8; Plants - 221; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (gnl|cdd|85388 : 114.0) no description available & (reliability: 3300.0) & (original description: Putative R1, Description = Alpha-glucan water dikinase, chloroplastic, PFAM = PF01326)' T '2.2.2.4' 'major CHO metabolism.degradation.starch.D enzyme' 'nbv0.3scaffold681_93369-114445' '(at2g40840 : 480.0) Encodes a cytosolic protein with transglucosidase and amylomaltase activity. It is an essential component of the pathway from starch to sucrose and cellular metabolism in leaves at night. The protein binds to heteroglycans and utilizes glucose, mannose and xylose as acceptors. Fucose and galactose can also act as acceptors but less efficiently than the previous three. It was also was also recently reported to act on maltodextrins. On the other hand, arabinose and fructose were not efficiently used. Its role probably includes metabolizing maltose exported from the chloroplast. Studies using maltose extracted from the double mutant be2-1 be3-2 showed that this enzyme is preferentially active of β-maltose.; disproportionating enzyme 2 (DPE2); FUNCTIONS IN: 4-alpha-glucanotransferase activity, heteroglycan binding; INVOLVED IN: polysaccharide metabolic process, circadian rhythm, maltose catabolic process, maltose metabolic process, starch catabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, family 77 (InterPro:IPR003385), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: disproportionating enzyme (TAIR:AT5G64860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85992 : 166.0) no description available & (reliability: 960.0) & (original description: Putative MALQ, Description = 4-alpha-glucanotransferase, PFAM = PF02446)' T '2.2.2.4' 'major CHO metabolism.degradation.starch.D enzyme' 'nbv0.3scaffold27056_8755-13138' '(at5g01260 : 161.0) Carbohydrate-binding-like fold; FUNCTIONS IN: carbohydrate binding, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044); BEST Arabidopsis thaliana protein match is: catalytics;carbohydrate kinases;phosphoglucan, water dikinases (TAIR:AT5G26570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative EFR, Description = Phosphoglucan, water dikinase, chloroplastic, PFAM = PF00686)' T '2.2.2.4' 'major CHO metabolism.degradation.starch.D enzyme' 'nbv0.5scaffold3235_46098-61589' '(q06801|dpep_soltu : 1015.0) 4-alpha-glucanotransferase, chloroplast precursor (EC 2.4.1.25) (Amylomaltase) (Disproportionating enzyme) (D-enzyme) - Solanum tuberosum (Potato) & (at5g64860 : 785.0) Encodes a maltotriose-metabolizing enzyme with chloroplastic α-1,4-glucanotransferase activity. Mutant has altered starch degradation.; disproportionating enzyme (DPE1); FUNCTIONS IN: 4-alpha-glucanotransferase activity, cation binding, catalytic activity; INVOLVED IN: response to cold, starch catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 77 (InterPro:IPR003385), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: disproportionating enzyme 2 (TAIR:AT2G40840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85992 : 556.0) no description available & (reliability: 1570.0) & (original description: Putative DPEP, Description = 4-alpha-glucanotransferase, chloroplastic/amyloplastic, PFAM = PF02446)' T '2.2.2.4' 'major CHO metabolism.degradation.starch.D enzyme' 'niben044scf00032299ctg000_1-13343' '(at2g40840 : 899.0) Encodes a cytosolic protein with transglucosidase and amylomaltase activity. It is an essential component of the pathway from starch to sucrose and cellular metabolism in leaves at night. The protein binds to heteroglycans and utilizes glucose, mannose and xylose as acceptors. Fucose and galactose can also act as acceptors but less efficiently than the previous three. It was also was also recently reported to act on maltodextrins. On the other hand, arabinose and fructose were not efficiently used. Its role probably includes metabolizing maltose exported from the chloroplast. Studies using maltose extracted from the double mutant be2-1 be3-2 showed that this enzyme is preferentially active of β-maltose.; disproportionating enzyme 2 (DPE2); FUNCTIONS IN: 4-alpha-glucanotransferase activity, heteroglycan binding; INVOLVED IN: polysaccharide metabolic process, circadian rhythm, maltose catabolic process, maltose metabolic process, starch catabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, family 77 (InterPro:IPR003385), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: disproportionating enzyme (TAIR:AT5G64860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85992 : 292.0) no description available & (q06801|dpep_soltu : 103.0) 4-alpha-glucanotransferase, chloroplast precursor (EC 2.4.1.25) (Amylomaltase) (Disproportionating enzyme) (D-enzyme) - Solanum tuberosum (Potato) & (reliability: 1798.0) & (original description: Putative dpe1, Description = 4-alpha-glucanotransferase, PFAM = PF02446;PF00686;PF00686)' T '2.2.2.4' 'major CHO metabolism.degradation.starch.D enzyme' 'niben101scf01101_388585-393221' '(at5g01260 : 162.0) Carbohydrate-binding-like fold; FUNCTIONS IN: carbohydrate binding, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044); BEST Arabidopsis thaliana protein match is: catalytics;carbohydrate kinases;phosphoglucan, water dikinases (TAIR:AT5G26570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative EFR, Description = Phosphoglucan, water dikinase, chloroplastic, PFAM = PF00686)' T '2.2.2.4' 'major CHO metabolism.degradation.starch.D enzyme' 'niben101scf01208_77037-140121' '(at2g40840 : 1393.0) Encodes a cytosolic protein with transglucosidase and amylomaltase activity. It is an essential component of the pathway from starch to sucrose and cellular metabolism in leaves at night. The protein binds to heteroglycans and utilizes glucose, mannose and xylose as acceptors. Fucose and galactose can also act as acceptors but less efficiently than the previous three. It was also was also recently reported to act on maltodextrins. On the other hand, arabinose and fructose were not efficiently used. Its role probably includes metabolizing maltose exported from the chloroplast. Studies using maltose extracted from the double mutant be2-1 be3-2 showed that this enzyme is preferentially active of β-maltose.; disproportionating enzyme 2 (DPE2); FUNCTIONS IN: 4-alpha-glucanotransferase activity, heteroglycan binding; INVOLVED IN: polysaccharide metabolic process, circadian rhythm, maltose catabolic process, maltose metabolic process, starch catabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, family 77 (InterPro:IPR003385), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: disproportionating enzyme (TAIR:AT5G64860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85992 : 295.0) no description available & (q06801|dpep_soltu : 104.0) 4-alpha-glucanotransferase, chloroplast precursor (EC 2.4.1.25) (Amylomaltase) (Disproportionating enzyme) (D-enzyme) - Solanum tuberosum (Potato) & (reliability: 2786.0) & (original description: Putative DPE2, Description = 4-alpha-glucanotransferase DPE2, PFAM = PF02446;PF00686;PF00686)' T '2.2.2.4' 'major CHO metabolism.degradation.starch.D enzyme' 'niben101scf05412_304538-308921' '(at5g01260 : 164.0) Carbohydrate-binding-like fold; FUNCTIONS IN: carbohydrate binding, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044); BEST Arabidopsis thaliana protein match is: catalytics;carbohydrate kinases;phosphoglucan, water dikinases (TAIR:AT5G26570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative glysoja_049563, Description = Phosphoglucan, water dikinase, chloroplastic, PFAM = PF00686)' T '2.2.2.4' 'major CHO metabolism.degradation.starch.D enzyme' 'niben101scf05830_730705-740785' '(q06801|dpep_soltu : 1006.0) 4-alpha-glucanotransferase, chloroplast precursor (EC 2.4.1.25) (Amylomaltase) (Disproportionating enzyme) (D-enzyme) - Solanum tuberosum (Potato) & (at5g64860 : 781.0) Encodes a maltotriose-metabolizing enzyme with chloroplastic α-1,4-glucanotransferase activity. Mutant has altered starch degradation.; disproportionating enzyme (DPE1); FUNCTIONS IN: 4-alpha-glucanotransferase activity, cation binding, catalytic activity; INVOLVED IN: response to cold, starch catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 77 (InterPro:IPR003385), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: disproportionating enzyme 2 (TAIR:AT2G40840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85992 : 554.0) no description available & (reliability: 1562.0) & (original description: Putative DPE1, Description = 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic, PFAM = PF02446)' T '2.2.2.6' 'major CHO metabolism.degradation.starch.transporter' 'nbv0.3scaffold61356_2954-9116' '(p29463|tpt_soltu : 659.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (E29) - Solanum tuberosum (Potato) & (at5g46110 : 598.0) mutant has Altered acclimation responses; Chloroplast Triose Phosphate Translocator; ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2 (APE2); FUNCTIONS IN: antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853), Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 2560 Blast hits to 2558 proteins in 418 species: Archae - 2; Bacteria - 316; Metazoa - 499; Fungi - 419; Plants - 1040; Viruses - 0; Other Eukaryotes - 284 (source: NCBI BLink). & (gnl|cdd|36654 : 219.0) no description available & (gnl|cdd|66803 : 106.0) no description available & (reliability: 1196.0) & (original description: Putative TPT, Description = Triose phosphate/phosphate translocator, chloroplastic, PFAM = PF03151)' T '2.2.2.6' 'major CHO metabolism.degradation.starch.transporter' 'nbv0.5scaffold135_760218-765685' '(at5g46110 : 470.0) mutant has Altered acclimation responses; Chloroplast Triose Phosphate Translocator; ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2 (APE2); FUNCTIONS IN: antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853), Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 2560 Blast hits to 2558 proteins in 418 species: Archae - 2; Bacteria - 316; Metazoa - 499; Fungi - 419; Plants - 1040; Viruses - 0; Other Eukaryotes - 284 (source: NCBI BLink). & (p29463|tpt_soltu : 465.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (E29) - Solanum tuberosum (Potato) & (gnl|cdd|36654 : 192.0) no description available & (gnl|cdd|66803 : 88.3) no description available & (reliability: 940.0) & (original description: Putative pt, Description = Triose phosphate/phosphate translocator, chloroplastic, PFAM = PF03151)' T '2.2.2.6' 'major CHO metabolism.degradation.starch.transporter' 'nbv0.5scaffold364_596468-771156' '(q7xtq5|mex1_orysa : 175.0) Maltose excess protein 1-like, chloroplast precursor - Oryza sativa (Rice) & (at5g17520 : 162.0) Encodes a maltose transporter that is expressed in leaves and roots. Mutations at the MEX1 locus cause accumulation of both starch and maltose in leaves, with maltose levels at least 40 times higher than that of wild-type. This gene encodes a protein located in the chloroplast envelope.; ROOT CAP 1 (RCP1); FUNCTIONS IN: maltose transmembrane transporter activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17523.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative MEX, Description = Maltose excess protein 1-like protein, PFAM = )' T '2.2.2.6' 'major CHO metabolism.degradation.starch.transporter' 'niben044scf00001418ctg012_571-3803' '(q7xtq5|mex1_orysa : 155.0) Maltose excess protein 1-like, chloroplast precursor - Oryza sativa (Rice) & (at5g17520 : 142.0) Encodes a maltose transporter that is expressed in leaves and roots. Mutations at the MEX1 locus cause accumulation of both starch and maltose in leaves, with maltose levels at least 40 times higher than that of wild-type. This gene encodes a protein located in the chloroplast envelope.; ROOT CAP 1 (RCP1); FUNCTIONS IN: maltose transmembrane transporter activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17523.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative MEX, Description = Maltose excess protein 1-like protein, PFAM = )' T '2.2.2.6' 'major CHO metabolism.degradation.starch.transporter' 'niben044scf00027736ctg002_883-6691' '(q7xtq5|mex1_orysa : 360.0) Maltose excess protein 1-like, chloroplast precursor - Oryza sativa (Rice) & (at5g17520 : 357.0) Encodes a maltose transporter that is expressed in leaves and roots. Mutations at the MEX1 locus cause accumulation of both starch and maltose in leaves, with maltose levels at least 40 times higher than that of wild-type. This gene encodes a protein located in the chloroplast envelope.; ROOT CAP 1 (RCP1); FUNCTIONS IN: maltose transmembrane transporter activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17523.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 714.0) & (original description: Putative MEX1, Description = Maltose excess protein 1, chloroplastic, PFAM = )' T '2.2.2.6' 'major CHO metabolism.degradation.starch.transporter' 'niben101scf01521_459566-465033' '(at5g46110 : 470.0) mutant has Altered acclimation responses; Chloroplast Triose Phosphate Translocator; ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2 (APE2); FUNCTIONS IN: antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853), Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 2560 Blast hits to 2558 proteins in 418 species: Archae - 2; Bacteria - 316; Metazoa - 499; Fungi - 419; Plants - 1040; Viruses - 0; Other Eukaryotes - 284 (source: NCBI BLink). & (p29463|tpt_soltu : 466.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (E29) - Solanum tuberosum (Potato) & (gnl|cdd|36654 : 192.0) no description available & (gnl|cdd|66803 : 87.9) no description available & (reliability: 940.0) & (original description: Putative pt, Description = Triose phosphate/phosphate translocator, chloroplastic, PFAM = PF03151)' T '2.2.2.6' 'major CHO metabolism.degradation.starch.transporter' 'niben101scf01991_88553-100122' '(at5g16150 : 671.0) Encodes a putative plastidic glucose transporter.; plastidic GLC translocator (PGLCT); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: response to trehalose stimulus; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G05030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35475 : 288.0) no description available & (gnl|cdd|84502 : 283.0) no description available & (q41144|stc_ricco : 146.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1342.0) & (original description: Putative pGlT, Description = Plastidic glucose transporter 4, PFAM = PF00083)' T '2.2.2.6' 'major CHO metabolism.degradation.starch.transporter' 'niben101scf02381_593382-605060' '(at5g16150 : 681.0) Encodes a putative plastidic glucose transporter.; plastidic GLC translocator (PGLCT); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: response to trehalose stimulus; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G05030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35475 : 293.0) no description available & (gnl|cdd|84502 : 284.0) no description available & (q41144|stc_ricco : 148.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1362.0) & (original description: Putative pGlT, Description = Plastidic glucose transporter 4, PFAM = PF00083)' T '2.2.2.6' 'major CHO metabolism.degradation.starch.transporter' 'niben101scf03427_499967-506870' '(p29463|tpt_soltu : 653.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (E29) - Solanum tuberosum (Potato) & (at5g46110 : 602.0) mutant has Altered acclimation responses; Chloroplast Triose Phosphate Translocator; ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2 (APE2); FUNCTIONS IN: antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853), Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 2560 Blast hits to 2558 proteins in 418 species: Archae - 2; Bacteria - 316; Metazoa - 499; Fungi - 419; Plants - 1040; Viruses - 0; Other Eukaryotes - 284 (source: NCBI BLink). & (gnl|cdd|36654 : 220.0) no description available & (gnl|cdd|66803 : 106.0) no description available & (reliability: 1204.0) & (original description: Putative TPT, Description = Triose phosphate/phosphate translocator, chloroplastic, PFAM = PF03151)' T '2.2.2.6' 'major CHO metabolism.degradation.starch.transporter' 'niben101scf15995_470386-476685' '(at5g17520 : 341.0) Encodes a maltose transporter that is expressed in leaves and roots. Mutations at the MEX1 locus cause accumulation of both starch and maltose in leaves, with maltose levels at least 40 times higher than that of wild-type. This gene encodes a protein located in the chloroplast envelope.; ROOT CAP 1 (RCP1); FUNCTIONS IN: maltose transmembrane transporter activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17523.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7xtq5|mex1_orysa : 339.0) Maltose excess protein 1-like, chloroplast precursor - Oryza sativa (Rice) & (reliability: 682.0) & (original description: Putative MEX1, Description = Maltose excess protein 1, chloroplastic, PFAM = )' T '2.2.2.8' 'major CHO metabolism.degradation.starch.ISA3' 'nbv0.5scaffold3451_130822-181394' '(at4g09020 : 1123.0) Encodes an isoamylase-like protein. Mutant studies show that the gene is strongly involved in starch breakdown. A GUS-protein fusion product was shown to localize to the surface of chloroplastic structures reminiscent of starch granules. In the mutants, the chloroplastic α-amylase AMY3 is upregulated.; isoamylase 3 (ISA3); FUNCTIONS IN: isoamylase activity, alpha-amylase activity; INVOLVED IN: carbohydrate metabolic process, starch catabolic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast starch grain; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Immunoglobulin-like fold (InterPro:IPR013783), Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: isoamylase 1 (TAIR:AT2G39930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31712 : 626.0) no description available & (gnl|cdd|35691 : 595.0) no description available & (reliability: 2246.0) & (original description: Putative ISA3, Description = Isoamylase 3, chloroplastic, PFAM = PF00128;PF02922)' T '2.2.2.8' 'major CHO metabolism.degradation.starch.ISA3' 'nbv0.5scaffold3451_166898-177661' '(at4g09020 : 126.0) Encodes an isoamylase-like protein. Mutant studies show that the gene is strongly involved in starch breakdown. A GUS-protein fusion product was shown to localize to the surface of chloroplastic structures reminiscent of starch granules. In the mutants, the chloroplastic α-amylase AMY3 is upregulated.; isoamylase 3 (ISA3); FUNCTIONS IN: isoamylase activity, alpha-amylase activity; INVOLVED IN: carbohydrate metabolic process, starch catabolic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast starch grain; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Immunoglobulin-like fold (InterPro:IPR013783), Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: isoamylase 1 (TAIR:AT2G39930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative DBE1, Description = Isoamylase isoform 3, PFAM = )' T '2.2.2.9' 'major CHO metabolism.degradation.starch.limit dextrinase/ pullulanase' 'niben044scf00009522ctg003_1-2524' '(at5g04360 : 226.0) Encodes an enzyme thought to be involved in the hydrolysis of the α-1,6 linkages during starch degradation in seed endosperm. However, a knockout mutant of Arabidopsis lacking limit dextrinase has normal rates of starch degradation in the leaf at night, indicating that more than one isoamylases might be involved in this process.; limit dextrinase (LDA); FUNCTIONS IN: limit dextrinase activity, pullulanase activity, alpha-amylase activity; INVOLVED IN: starch biosynthetic process, carbohydrate metabolic process, starch catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-1,6-glucosidases, pullulanase-type (InterPro:IPR011839), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: isoamylase 3 (TAIR:AT4G09020.1); Has 6260 Blast hits to 6253 proteins in 1613 species: Archae - 73; Bacteria - 5462; Metazoa - 45; Fungi - 1; Plants - 262; Viruses - 0; Other Eukaryotes - 417 (source: NCBI BLink). & (gnl|cdd|31712 : 93.5) no description available & (gnl|cdd|35691 : 80.8) no description available & (reliability: 452.0) & (original description: Putative acbE, Description = Pullulanase 1, chloroplastic, PFAM = )' T '2.2.2.9' 'major CHO metabolism.degradation.starch.limit dextrinase/ pullulanase' 'niben101scf00792_10339-34179' '(at5g04360 : 1291.0) Encodes an enzyme thought to be involved in the hydrolysis of the α-1,6 linkages during starch degradation in seed endosperm. However, a knockout mutant of Arabidopsis lacking limit dextrinase has normal rates of starch degradation in the leaf at night, indicating that more than one isoamylases might be involved in this process.; limit dextrinase (LDA); FUNCTIONS IN: limit dextrinase activity, pullulanase activity, alpha-amylase activity; INVOLVED IN: starch biosynthetic process, carbohydrate metabolic process, starch catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-1,6-glucosidases, pullulanase-type (InterPro:IPR011839), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: isoamylase 3 (TAIR:AT4G09020.1); Has 6260 Blast hits to 6253 proteins in 1613 species: Archae - 73; Bacteria - 5462; Metazoa - 45; Fungi - 1; Plants - 262; Viruses - 0; Other Eukaryotes - 417 (source: NCBI BLink). & (gnl|cdd|35691 : 440.0) no description available & (gnl|cdd|31712 : 304.0) no description available & (reliability: 2582.0) & (original description: Putative PU1, Description = Pullulanase 1, chloroplastic, PFAM = PF02922;PF11852)' T '2.2.2.10' 'major CHO metabolism.degradation.starch.laforin like phosphoglucan phosphatase (SEX4)' 'nbv0.5scaffold2120_218166-234769' '(at3g52180 : 485.0) Encodes a plant-specific protein phosphatase that contains a protein tyrosine phosphatase (PTP) catalytic domain and a kinase interaction sequence (KIS) domain. This protein interacts with the plant SnRK AKIN11. Binds starch. Localized in the chloroplast.; STARCH-EXCESS 4 (SEX4); FUNCTIONS IN: protein tyrosine/serine/threonine phosphatase activity, polysaccharide binding; INVOLVED IN: protein amino acid dephosphorylation, starch metabolic process, starch catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340); BEST Arabidopsis thaliana protein match is: dual specificity protein phosphatase (DsPTP1) family protein (TAIR:AT3G10940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36928 : 94.9) no description available & (reliability: 970.0) & (original description: Putative DSP4, Description = Phosphoglucan phosphatase DSP4, amyloplastic, PFAM = PF16561;PF00782)' T '2.2.2.10' 'major CHO metabolism.degradation.starch.laforin like phosphoglucan phosphatase (SEX4)' 'niben044scf00017154ctg009_1-5693' '(at3g52180 : 263.0) Encodes a plant-specific protein phosphatase that contains a protein tyrosine phosphatase (PTP) catalytic domain and a kinase interaction sequence (KIS) domain. This protein interacts with the plant SnRK AKIN11. Binds starch. Localized in the chloroplast.; STARCH-EXCESS 4 (SEX4); FUNCTIONS IN: protein tyrosine/serine/threonine phosphatase activity, polysaccharide binding; INVOLVED IN: protein amino acid dephosphorylation, starch metabolic process, starch catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340); BEST Arabidopsis thaliana protein match is: dual specificity protein phosphatase (DsPTP1) family protein (TAIR:AT3G10940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative DSP4, Description = Protein tyrosine protein, PFAM = PF00782)' T '2.2.2.1001' 'major CHO metabolism.degradation.starch' 'starch (total)' 'cell wall synthesis; major CHO metabolism.degradation.starch' M '2.2.2.1002' 'major CHO metabolism.degradation.starch' 'maltose' 'cell wall synthesis; major CHO metabolism.degradation.starch' M '2.2.2.1003' 'major CHO metabolism.degradation.starch' 'isomaltose' 'cell wall synthesis; major CHO metabolism.degradation.starch' M '2.2.2.1004' 'major CHO metabolism.degradation.starch' 'maltotriose' 'cell wall synthesis; major CHO metabolism.degradation.starch' M '2.2.10' 'major CHO metabolism.degradation.acetate metabolism' '' '' '2.2.10.1' 'major CHO metabolism.degradation.acetate metabolism.acetate kinase' '' '' '2.2.10.2' 'major CHO metabolism.degradation.acetate metabolism.phosphate acetyltransferase' '' '' '2.2.10.3' 'major CHO metabolism.degradation.acetate metabolism.acetyl-CoA synthetase' '' '' '3' 'minor CHO metabolism' '' '' '3.1' 'minor CHO metabolism.raffinose family' '' '' '3.1.1' 'minor CHO metabolism.raffinose family.galactinol synthases' '' '' '3.1.1.1' 'minor CHO metabolism.raffinose family.galactinol synthases.known' 'niben044scf00007624ctg004_8841-13180' '(at2g47180 : 494.0) galactinol synthase 1 (GolS1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: response to high light intensity, carbohydrate biosynthetic process, response to hydrogen peroxide, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galactinol synthase 2 (TAIR:AT1G56600.1); Has 1198 Blast hits to 1197 proteins in 285 species: Archae - 0; Bacteria - 104; Metazoa - 258; Fungi - 278; Plants - 420; Viruses - 71; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|37161 : 226.0) no description available & (gnl|cdd|85496 : 174.0) no description available & (reliability: 988.0) & (original description: Putative GOLS2, Description = Galactinol synthase 2, PFAM = PF01501)' T '3.1.1.1' 'minor CHO metabolism.raffinose family.galactinol synthases.known' 'niben044scf00040802ctg001_1-2721' '(at2g47180 : 506.0) galactinol synthase 1 (GolS1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: response to high light intensity, carbohydrate biosynthetic process, response to hydrogen peroxide, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galactinol synthase 2 (TAIR:AT1G56600.1); Has 1198 Blast hits to 1197 proteins in 285 species: Archae - 0; Bacteria - 104; Metazoa - 258; Fungi - 278; Plants - 420; Viruses - 71; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|37161 : 242.0) no description available & (gnl|cdd|85496 : 176.0) no description available & (reliability: 1012.0) & (original description: Putative GOLS2, Description = Galactinol synthase 2, PFAM = PF01501)' T '3.1.1.1' 'minor CHO metabolism.raffinose family.galactinol synthases.known' 'niben101scf01964_798637-802449' '(at2g47180 : 406.0) galactinol synthase 1 (GolS1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: response to high light intensity, carbohydrate biosynthetic process, response to hydrogen peroxide, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galactinol synthase 2 (TAIR:AT1G56600.1); Has 1198 Blast hits to 1197 proteins in 285 species: Archae - 0; Bacteria - 104; Metazoa - 258; Fungi - 278; Plants - 420; Viruses - 71; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|85496 : 170.0) no description available & (gnl|cdd|37161 : 161.0) no description available & (reliability: 812.0) & (original description: Putative GOLS1, Description = Galactinol synthase 1, PFAM = PF01501)' T '3.1.1.1' 'minor CHO metabolism.raffinose family.galactinol synthases.known' 'niben101scf06412_311278-315202' '(at2g47180 : 514.0) galactinol synthase 1 (GolS1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: response to high light intensity, carbohydrate biosynthetic process, response to hydrogen peroxide, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galactinol synthase 2 (TAIR:AT1G56600.1); Has 1198 Blast hits to 1197 proteins in 285 species: Archae - 0; Bacteria - 104; Metazoa - 258; Fungi - 278; Plants - 420; Viruses - 71; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|37161 : 235.0) no description available & (gnl|cdd|85496 : 179.0) no description available & (reliability: 1028.0) & (original description: Putative GOLS1, Description = Galactinol synthase 1, PFAM = PF01501)' T '3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'nbv0.3scaffold58477_9322-12360' '(at3g28340 : 478.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 10 (GATL10); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: glucosyl transferase family 8 (TAIR:AT1G70090.2); Has 2215 Blast hits to 2207 proteins in 459 species: Archae - 2; Bacteria - 1092; Metazoa - 267; Fungi - 4; Plants - 737; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|85496 : 186.0) no description available & (reliability: 956.0) & (original description: Putative GATL10, Description = Probable galacturonosyltransferase-like 10, PFAM = PF01501)' T '3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'nbv0.5scaffold3342_22708-26253' '(at3g06260 : 526.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 4 (GATL4); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase-like 3 (TAIR:AT1G13250.1); Has 2860 Blast hits to 2846 proteins in 632 species: Archae - 2; Bacteria - 1548; Metazoa - 358; Fungi - 53; Plants - 770; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|85496 : 195.0) no description available & (reliability: 1052.0) & (original description: Putative GATL4, Description = Probable galacturonosyltransferase-like 4, PFAM = PF01501)' T '3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'niben044scf00007624ctg004_8841-13180' '(at2g47180 : 494.0) galactinol synthase 1 (GolS1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: response to high light intensity, carbohydrate biosynthetic process, response to hydrogen peroxide, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galactinol synthase 2 (TAIR:AT1G56600.1); Has 1198 Blast hits to 1197 proteins in 285 species: Archae - 0; Bacteria - 104; Metazoa - 258; Fungi - 278; Plants - 420; Viruses - 71; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|37161 : 226.0) no description available & (gnl|cdd|85496 : 174.0) no description available & (reliability: 918.0) & (original description: Putative GOLS2, Description = Galactinol synthase 2, PFAM = PF01501)' T '3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'niben044scf00014979ctg004_31271-34412' '(at3g06260 : 514.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 4 (GATL4); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase-like 3 (TAIR:AT1G13250.1); Has 2860 Blast hits to 2846 proteins in 632 species: Archae - 2; Bacteria - 1548; Metazoa - 358; Fungi - 53; Plants - 770; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|85496 : 194.0) no description available & (reliability: 1028.0) & (original description: Putative GATL4, Description = Probable galacturonosyltransferase-like 4, PFAM = PF01501)' T '3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'niben044scf00039686ctg005_5606-8801' '(at3g06260 : 522.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 4 (GATL4); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase-like 3 (TAIR:AT1G13250.1); Has 2860 Blast hits to 2846 proteins in 632 species: Archae - 2; Bacteria - 1548; Metazoa - 358; Fungi - 53; Plants - 770; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|85496 : 191.0) no description available & (reliability: 1044.0) & (original description: Putative GATL4, Description = Probable galacturonosyltransferase-like 4, PFAM = PF01501)' T '3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'niben044scf00040802ctg001_1-2721' '(at2g47180 : 506.0) galactinol synthase 1 (GolS1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: response to high light intensity, carbohydrate biosynthetic process, response to hydrogen peroxide, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galactinol synthase 2 (TAIR:AT1G56600.1); Has 1198 Blast hits to 1197 proteins in 285 species: Archae - 0; Bacteria - 104; Metazoa - 258; Fungi - 278; Plants - 420; Viruses - 71; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|37161 : 242.0) no description available & (gnl|cdd|85496 : 176.0) no description available & (reliability: 932.0) & (original description: Putative GOLS2, Description = Galactinol synthase 2, PFAM = PF01501)' T '3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'niben044scf00049613ctg000_1-4951' '(at1g13250 : 444.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 3 (GATL3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase-like 4 (TAIR:AT3G06260.1); Has 2168 Blast hits to 2160 proteins in 496 species: Archae - 2; Bacteria - 1004; Metazoa - 285; Fungi - 17; Plants - 765; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|85496 : 178.0) no description available & (reliability: 884.0) & (original description: Putative GATL3, Description = Probable galacturonosyltransferase-like 3, PFAM = PF01501)' T '3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'niben101scf00621_1097757-1100425' '(at3g06260 : 523.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 4 (GATL4); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase-like 3 (TAIR:AT1G13250.1); Has 2860 Blast hits to 2846 proteins in 632 species: Archae - 2; Bacteria - 1548; Metazoa - 358; Fungi - 53; Plants - 770; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|85496 : 192.0) no description available & (reliability: 1046.0) & (original description: Putative GATL4, Description = Probable galacturonosyltransferase-like 4, PFAM = PF01501)' T '3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'niben101scf01964_798637-802449' '(at2g47180 : 406.0) galactinol synthase 1 (GolS1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: response to high light intensity, carbohydrate biosynthetic process, response to hydrogen peroxide, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galactinol synthase 2 (TAIR:AT1G56600.1); Has 1198 Blast hits to 1197 proteins in 285 species: Archae - 0; Bacteria - 104; Metazoa - 258; Fungi - 278; Plants - 420; Viruses - 71; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|85496 : 170.0) no description available & (gnl|cdd|37161 : 161.0) no description available & (reliability: 766.0) & (original description: Putative GOLS1, Description = Galactinol synthase 1, PFAM = PF01501)' T '3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'niben101scf06280_138066-141151' '(at3g28340 : 490.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 10 (GATL10); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: glucosyl transferase family 8 (TAIR:AT1G70090.2); Has 2215 Blast hits to 2207 proteins in 459 species: Archae - 2; Bacteria - 1092; Metazoa - 267; Fungi - 4; Plants - 737; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|85496 : 189.0) no description available & (reliability: 980.0) & (original description: Putative GATL2, Description = Probable galacturonosyltransferase-like 2, PFAM = PF01501)' T '3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'niben101scf06888_355821-358918' '(at3g06260 : 525.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 4 (GATL4); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase-like 3 (TAIR:AT1G13250.1); Has 2860 Blast hits to 2846 proteins in 632 species: Archae - 2; Bacteria - 1548; Metazoa - 358; Fungi - 53; Plants - 770; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|85496 : 194.0) no description available & (reliability: 1050.0) & (original description: Putative GATL4, Description = Probable galacturonosyltransferase-like 4, PFAM = PF01501)' T '3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'niben101scf06996_260548-264721' '(at3g62660 : 411.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 7 (GATL7); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 5 (TAIR:AT1G02720.2); Has 1817 Blast hits to 1811 proteins in 371 species: Archae - 0; Bacteria - 732; Metazoa - 289; Fungi - 4; Plants - 732; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|85496 : 183.0) no description available & (reliability: 746.0) & (original description: Putative GATL7, Description = Probable galacturonosyltransferase-like 7, PFAM = PF01501)' T '3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'niben101scf09719_46401-49946' '(at3g06260 : 526.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 4 (GATL4); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase-like 3 (TAIR:AT1G13250.1); Has 2860 Blast hits to 2846 proteins in 632 species: Archae - 2; Bacteria - 1548; Metazoa - 358; Fungi - 53; Plants - 770; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|85496 : 195.0) no description available & (reliability: 1052.0) & (original description: Putative GLZ1, Description = Hexosyltransferase, PFAM = PF01501)' T '3.1.1.2' 'minor CHO metabolism.raffinose family.galactinol synthases.putative' 'niben101scf11037_296082-299778' '(at3g06260 : 530.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 4 (GATL4); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase-like 3 (TAIR:AT1G13250.1); Has 2860 Blast hits to 2846 proteins in 632 species: Archae - 2; Bacteria - 1548; Metazoa - 358; Fungi - 53; Plants - 770; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|85496 : 195.0) no description available & (reliability: 1060.0) & (original description: Putative GATL4, Description = Probable galacturonosyltransferase-like 4, PFAM = PF01501)' T '3.1.2' 'minor CHO metabolism.raffinose family.raffinose synthases' '' '' '3.1.2.1' 'minor CHO metabolism.raffinose family.raffinose synthases.known' 'niben101scf11415_73169-79707' '(gnl|cdd|69227 : 1157.0) no description available & (at5g40390 : 1120.0) Encodes a protein which might be involved in the formation of verbascose. A T-DNA insertion mutant was shown to have a decreased amount of verbascose (as well as mannitol) whereas the levels of raffinose and stachyose remained unchanged.; seed imbibition 1-like (SIP1); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, galactinol-sucrose galactosyltransferase activity; INVOLVED IN: mannitol biosynthetic process, raffinose family oligosaccharide biosynthetic process, response to water deprivation, sucrose biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Raffinose synthase (InterPro:IPR008811); BEST Arabidopsis thaliana protein match is: Raffinose synthase family protein (TAIR:AT5G20250.4); Has 508 Blast hits to 470 proteins in 135 species: Archae - 27; Bacteria - 74; Metazoa - 0; Fungi - 82; Plants - 317; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q93xk2|stsyn_pea : 662.0) Stachyose synthase precursor (EC 2.4.1.67) (Galactinol--raffinose galactosyltransferase) - Pisum sativum (Garden pea) & (reliability: 2240.0) & (original description: Putative RFS, Description = Galactinol--sucrose galactosyltransferase, PFAM = PF05691)' T '3.1.2.2' 'minor CHO metabolism.raffinose family.raffinose synthases.putative' 'nbv0.3scaffold35841_159-6884' '(at1g55740 : 1136.0) seed imbibition 1 (SIP1); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Raffinose synthase (InterPro:IPR008811); BEST Arabidopsis thaliana protein match is: seed imbibition 2 (TAIR:AT3G57520.1); Has 563 Blast hits to 527 proteins in 159 species: Archae - 29; Bacteria - 119; Metazoa - 0; Fungi - 82; Plants - 322; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|69227 : 950.0) no description available & (q93xk2|stsyn_pea : 336.0) Stachyose synthase precursor (EC 2.4.1.67) (Galactinol--raffinose galactosyltransferase) - Pisum sativum (Garden pea) & (reliability: 2272.0) & (original description: Putative aga1, Description = Alkaline alpha galactosidase I, PFAM = PF05691)' T '3.1.2.2' 'minor CHO metabolism.raffinose family.raffinose synthases.putative' 'niben044scf00043840ctg002_1-2262' '(at3g57520 : 387.0) seed imbibition 2 (SIP2); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Raffinose synthase (InterPro:IPR008811); BEST Arabidopsis thaliana protein match is: seed imbibition 1 (TAIR:AT1G55740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69227 : 315.0) no description available & (q93xk2|stsyn_pea : 137.0) Stachyose synthase precursor (EC 2.4.1.67) (Galactinol--raffinose galactosyltransferase) - Pisum sativum (Garden pea) & (reliability: 774.0) & (original description: Putative aGa1, Description = Putative glycosyltransferase At1g55740 family, PFAM = PF05691)' T '3.1.2.2' 'minor CHO metabolism.raffinose family.raffinose synthases.putative' 'niben101scf03987_2190-23047' '(at3g57520 : 1245.0) seed imbibition 2 (SIP2); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Raffinose synthase (InterPro:IPR008811); BEST Arabidopsis thaliana protein match is: seed imbibition 1 (TAIR:AT1G55740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69227 : 1072.0) no description available & (q93xk2|stsyn_pea : 311.0) Stachyose synthase precursor (EC 2.4.1.67) (Galactinol--raffinose galactosyltransferase) - Pisum sativum (Garden pea) & (reliability: 2490.0) & (original description: Putative RFS2, Description = Probable galactinol--sucrose galactosyltransferase 2, PFAM = PF05691)' T '3.1.2.2' 'minor CHO metabolism.raffinose family.raffinose synthases.putative' 'niben101scf05804_487778-494671' '(at5g20250 : 1152.0) encodes a member of glycosyl hydrolase family 36. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.; DARK INDUCIBLE 10 (DIN10); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Raffinose synthase (InterPro:IPR008811); BEST Arabidopsis thaliana protein match is: seed imbibition 2 (TAIR:AT3G57520.1). & (gnl|cdd|69227 : 977.0) no description available & (q93xk2|stsyn_pea : 292.0) Stachyose synthase precursor (EC 2.4.1.67) (Galactinol--raffinose galactosyltransferase) - Pisum sativum (Garden pea) & (reliability: 2304.0) & (original description: Putative RFS6, Description = Probable galactinol--sucrose galactosyltransferase 6, PFAM = PF05691)' T '3.1.2.2' 'minor CHO metabolism.raffinose family.raffinose synthases.putative' 'niben101scf08182_206792-214876' '(at1g55740 : 1155.0) seed imbibition 1 (SIP1); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Raffinose synthase (InterPro:IPR008811); BEST Arabidopsis thaliana protein match is: seed imbibition 2 (TAIR:AT3G57520.1); Has 563 Blast hits to 527 proteins in 159 species: Archae - 29; Bacteria - 119; Metazoa - 0; Fungi - 82; Plants - 322; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|69227 : 948.0) no description available & (q93xk2|stsyn_pea : 336.0) Stachyose synthase precursor (EC 2.4.1.67) (Galactinol--raffinose galactosyltransferase) - Pisum sativum (Garden pea) & (reliability: 2310.0) & (original description: Putative aga1, Description = Alkaline alpha galactosidase I, PFAM = PF05691)' T '3.1.3' 'minor CHO metabolism.raffinose family.stachyose synthases' '' '' '3.1.1001' 'minor CHO metabolism.raffinose family' 'raffinose' 'minor CHO metabolism.raffinose' M '3.1.1002' 'minor CHO metabolism.raffinose family' 'galactinol' '' M '3.2' 'minor CHO metabolism.trehalose' '' '' '3.2.1' 'minor CHO metabolism.trehalose.TPS' 'niben044scf00034043ctg008_4410-19582' '(at1g78580 : 1443.0) Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain but no trehalose phosphatase (TPP)-like domain. ATTPS1 is able to complement yeast tps1 mutants in vivo. The gene product modulates cell growth but not cell differentiation by determining cell wall deposition and cell division.; trehalose-6-phosphate synthase (TPS1); CONTAINS InterPro DOMAIN/s: Alpha,alpha-trehalose-phosphate synthase (InterPro:IPR012766), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-phosphatase/synthase 2 (TAIR:AT1G16980.1); Has 6189 Blast hits to 3807 proteins in 1021 species: Archae - 45; Bacteria - 1772; Metazoa - 831; Fungi - 808; Plants - 384; Viruses - 0; Other Eukaryotes - 2349 (source: NCBI BLink). & (gnl|cdd|36268 : 771.0) no description available & (gnl|cdd|85165 : 668.0) no description available & (reliability: 2886.0) & (original description: Putative TPS1, Description = Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1, PFAM = PF00982;PF02358)' T '3.2.1' 'minor CHO metabolism.trehalose.TPS' 'niben101scf01983_662226-676009' '(at1g78580 : 1444.0) Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain but no trehalose phosphatase (TPP)-like domain. ATTPS1 is able to complement yeast tps1 mutants in vivo. The gene product modulates cell growth but not cell differentiation by determining cell wall deposition and cell division.; trehalose-6-phosphate synthase (TPS1); CONTAINS InterPro DOMAIN/s: Alpha,alpha-trehalose-phosphate synthase (InterPro:IPR012766), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-phosphatase/synthase 2 (TAIR:AT1G16980.1); Has 6189 Blast hits to 3807 proteins in 1021 species: Archae - 45; Bacteria - 1772; Metazoa - 831; Fungi - 808; Plants - 384; Viruses - 0; Other Eukaryotes - 2349 (source: NCBI BLink). & (gnl|cdd|36268 : 769.0) no description available & (gnl|cdd|85165 : 667.0) no description available & (reliability: 2888.0) & (original description: Putative TPS1, Description = Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1, PFAM = PF00982;PF02358)' T '3.2.1' 'minor CHO metabolism.trehalose.TPS' 'niben101scf08195_701197-723999' '(at1g78580 : 1386.0) Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain but no trehalose phosphatase (TPP)-like domain. ATTPS1 is able to complement yeast tps1 mutants in vivo. The gene product modulates cell growth but not cell differentiation by determining cell wall deposition and cell division.; trehalose-6-phosphate synthase (TPS1); CONTAINS InterPro DOMAIN/s: Alpha,alpha-trehalose-phosphate synthase (InterPro:IPR012766), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-phosphatase/synthase 2 (TAIR:AT1G16980.1); Has 6189 Blast hits to 3807 proteins in 1021 species: Archae - 45; Bacteria - 1772; Metazoa - 831; Fungi - 808; Plants - 384; Viruses - 0; Other Eukaryotes - 2349 (source: NCBI BLink). & (gnl|cdd|36268 : 758.0) no description available & (gnl|cdd|85165 : 648.0) no description available & (reliability: 2772.0) & (original description: Putative TPS1, Description = Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1, PFAM = PF00982;PF02358)' T '3.2.2' 'minor CHO metabolism.trehalose.TPP' 'nbv0.3scaffold26024_23764-28067' '(at4g39770 : 423.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G22190.1); Has 2411 Blast hits to 2406 proteins in 857 species: Archae - 41; Bacteria - 1356; Metazoa - 219; Fungi - 156; Plants - 489; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|36268 : 270.0) no description available & (gnl|cdd|66079 : 215.0) no description available & (reliability: 846.0) & (original description: Putative TPPJ, Description = Probable trehalose-phosphate phosphatase J, PFAM = PF02358)' T '3.2.2' 'minor CHO metabolism.trehalose.TPP' 'niben101scf01252_417025-426923' '(at5g65140 : 492.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: response to cadmium ion, trehalose biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G10100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36268 : 270.0) no description available & (gnl|cdd|66079 : 219.0) no description available & (reliability: 984.0) & (original description: Putative TPPJ, Description = Probable trehalose-phosphate phosphatase J, PFAM = PF02358)' T '3.2.2' 'minor CHO metabolism.trehalose.TPP' 'niben101scf01731_691330-695489' '(at5g51460 : 472.0) homologous to the C-terminal part of microbial trehalose-6-phosphate phosphatases; ATTPPA; FUNCTIONS IN: trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT4G22590.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36268 : 259.0) no description available & (gnl|cdd|66079 : 198.0) no description available & (reliability: 944.0) & (original description: Putative TPPA, Description = Trehalose-phosphate phosphatase A, PFAM = PF02358)' T '3.2.2' 'minor CHO metabolism.trehalose.TPP' 'niben101scf02511_865203-869342' '(at1g35910 : 332.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-6-phosphate phosphatase (TAIR:AT1G78090.1); Has 2331 Blast hits to 2325 proteins in 843 species: Archae - 41; Bacteria - 1347; Metazoa - 218; Fungi - 145; Plants - 454; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (gnl|cdd|36268 : 199.0) no description available & (gnl|cdd|66079 : 179.0) no description available & (reliability: 664.0) & (original description: Putative TPPD, Description = Probable trehalose-phosphate phosphatase D, PFAM = PF02358)' T '3.2.2' 'minor CHO metabolism.trehalose.TPP' 'niben101scf03167_137751-143951' '(at4g22590 : 506.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT4G12430.1); Has 2353 Blast hits to 2348 proteins in 847 species: Archae - 42; Bacteria - 1327; Metazoa - 222; Fungi - 153; Plants - 482; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|36268 : 281.0) no description available & (gnl|cdd|66079 : 202.0) no description available & (reliability: 1012.0) & (original description: Putative TPPG, Description = Probable trehalose-phosphate phosphatase G, PFAM = PF02358)' T '3.2.2' 'minor CHO metabolism.trehalose.TPP' 'niben101scf05030_631352-635548' '(at5g51460 : 518.0) homologous to the C-terminal part of microbial trehalose-6-phosphate phosphatases; ATTPPA; FUNCTIONS IN: trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT4G22590.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36268 : 289.0) no description available & (gnl|cdd|66079 : 199.0) no description available & (reliability: 1036.0) & (original description: Putative TPPA, Description = Trehalose-phosphate phosphatase A, PFAM = PF02358)' T '3.2.2' 'minor CHO metabolism.trehalose.TPP' 'niben101scf07703_208019-212161' '(at5g65140 : 455.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: response to cadmium ion, trehalose biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G10100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36268 : 282.0) no description available & (gnl|cdd|66079 : 219.0) no description available & (reliability: 910.0) & (original description: Putative TPP6, Description = Probable trehalose-phosphate phosphatase 6, PFAM = PF02358)' T '3.2.2' 'minor CHO metabolism.trehalose.TPP' 'niben101scf10283_215777-219787' '(at4g39770 : 441.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G22190.1); Has 2411 Blast hits to 2406 proteins in 857 species: Archae - 41; Bacteria - 1356; Metazoa - 219; Fungi - 156; Plants - 489; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|36268 : 277.0) no description available & (gnl|cdd|66079 : 214.0) no description available & (reliability: 882.0) & (original description: Putative TPPB, Description = Trehalose-phosphate phosphatase B, PFAM = PF02358)' T '3.2.2' 'minor CHO metabolism.trehalose.TPP' 'niben101scf10966_332793-337125' '(at5g65140 : 486.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: response to cadmium ion, trehalose biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G10100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36268 : 287.0) no description available & (gnl|cdd|66079 : 219.0) no description available & (reliability: 972.0) & (original description: Putative TPPJ, Description = Probable trehalose-phosphate phosphatase J, PFAM = PF02358)' T '3.2.3' 'minor CHO metabolism.trehalose.potential TPS/TPP' 'niben044scf00000510ctg006_2183-6521' '(at1g06410 : 1253.0) Encodes an enzyme putatively involved in trehalose biosynthesis. Though the protein has both trehalose-6-phosphate synthase (TPS)-like and trehalose-6-phosphate phosphatase (TPP)-like domains, neither activity has been detected in enzymatic assays nor has the protein been able to complement yeast TPS or TPP mutants.; trehalose-phosphatase/synthase 7 (TPS7); FUNCTIONS IN: transferase activity, transferring glycosyl groups, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose phosphatase/synthase 5 (TAIR:AT4G17770.1); Has 4234 Blast hits to 4163 proteins in 1008 species: Archae - 52; Bacteria - 2285; Metazoa - 161; Fungi - 658; Plants - 607; Viruses - 0; Other Eukaryotes - 471 (source: NCBI BLink). & (gnl|cdd|36268 : 737.0) no description available & (gnl|cdd|85165 : 595.0) no description available & (reliability: 2506.0) & (original description: Putative TPS, Description = Trehalose-6-phosphate synthase, PFAM = PF00982;PF02358)' T '3.2.3' 'minor CHO metabolism.trehalose.potential TPS/TPP' 'niben044scf00006728ctg001_672-5119' '(at1g23870 : 1345.0) Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain.; trehalose-phosphatase/synthase 9 (TPS9); FUNCTIONS IN: transferase activity, transferring glycosyl groups, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-6-phosphatase synthase S8 (TAIR:AT1G70290.1); Has 4900 Blast hits to 4828 proteins in 1062 species: Archae - 56; Bacteria - 2863; Metazoa - 236; Fungi - 655; Plants - 621; Viruses - 0; Other Eukaryotes - 469 (source: NCBI BLink). & (gnl|cdd|36268 : 862.0) no description available & (gnl|cdd|85165 : 631.0) no description available & (reliability: 2690.0) & (original description: Putative TPS9, Description = Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9, PFAM = PF00982;PF02358)' T '3.2.3' 'minor CHO metabolism.trehalose.potential TPS/TPP' 'niben044scf00007764ctg013_4339-10641' '(at4g17770 : 1390.0) Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain. Phosphorylated TPS5 extracted from Arabidopsis cells binds directly to 14-3-3 isoforms.; trehalose phosphatase/synthase 5 (TPS5); FUNCTIONS IN: transferase activity, transferring glycosyl groups, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase / trehalose-phosphatase family protein (TAIR:AT1G68020.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36268 : 844.0) no description available & (gnl|cdd|85165 : 620.0) no description available & (reliability: 2780.0) & (original description: Putative TPS5, Description = Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5, PFAM = PF02358;PF00982)' T '3.2.3' 'minor CHO metabolism.trehalose.potential TPS/TPP' 'niben044scf00037870ctg007_37564-45389' '(at1g06410 : 1322.0) Encodes an enzyme putatively involved in trehalose biosynthesis. Though the protein has both trehalose-6-phosphate synthase (TPS)-like and trehalose-6-phosphate phosphatase (TPP)-like domains, neither activity has been detected in enzymatic assays nor has the protein been able to complement yeast TPS or TPP mutants.; trehalose-phosphatase/synthase 7 (TPS7); FUNCTIONS IN: transferase activity, transferring glycosyl groups, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose phosphatase/synthase 5 (TAIR:AT4G17770.1); Has 4234 Blast hits to 4163 proteins in 1008 species: Archae - 52; Bacteria - 2285; Metazoa - 161; Fungi - 658; Plants - 607; Viruses - 0; Other Eukaryotes - 471 (source: NCBI BLink). & (gnl|cdd|36268 : 801.0) no description available & (gnl|cdd|85165 : 595.0) no description available & (reliability: 2644.0) & (original description: Putative TPS7, Description = Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7, PFAM = PF02358;PF00982)' T '3.2.3' 'minor CHO metabolism.trehalose.potential TPS/TPP' 'niben101scf00463_57748-64098' '(at1g06410 : 1325.0) Encodes an enzyme putatively involved in trehalose biosynthesis. Though the protein has both trehalose-6-phosphate synthase (TPS)-like and trehalose-6-phosphate phosphatase (TPP)-like domains, neither activity has been detected in enzymatic assays nor has the protein been able to complement yeast TPS or TPP mutants.; trehalose-phosphatase/synthase 7 (TPS7); FUNCTIONS IN: transferase activity, transferring glycosyl groups, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose phosphatase/synthase 5 (TAIR:AT4G17770.1); Has 4234 Blast hits to 4163 proteins in 1008 species: Archae - 52; Bacteria - 2285; Metazoa - 161; Fungi - 658; Plants - 607; Viruses - 0; Other Eukaryotes - 471 (source: NCBI BLink). & (gnl|cdd|36268 : 792.0) no description available & (gnl|cdd|85165 : 584.0) no description available & (reliability: 2650.0) & (original description: Putative TPS7, Description = Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7, PFAM = PF00982;PF02358)' T '3.2.3' 'minor CHO metabolism.trehalose.potential TPS/TPP' 'niben101scf00927_404727-410194' '(at1g68020 : 1467.0) Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain and a trehalose phosphatase (TPP)-like domain. It can complement a yeast mutant lacking both of these activities suggesting that this is a bifunctional enzyme.; ATTPS6; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose phosphatase/synthase 5 (TAIR:AT4G17770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36268 : 842.0) no description available & (gnl|cdd|85165 : 619.0) no description available & (reliability: 2934.0) & (original description: Putative TPS6, Description = Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6, PFAM = PF00982;PF02358)' T '3.2.3' 'minor CHO metabolism.trehalose.potential TPS/TPP' 'niben101scf01636_85276-94876' '(at1g06410 : 1324.0) Encodes an enzyme putatively involved in trehalose biosynthesis. Though the protein has both trehalose-6-phosphate synthase (TPS)-like and trehalose-6-phosphate phosphatase (TPP)-like domains, neither activity has been detected in enzymatic assays nor has the protein been able to complement yeast TPS or TPP mutants.; trehalose-phosphatase/synthase 7 (TPS7); FUNCTIONS IN: transferase activity, transferring glycosyl groups, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose phosphatase/synthase 5 (TAIR:AT4G17770.1); Has 4234 Blast hits to 4163 proteins in 1008 species: Archae - 52; Bacteria - 2285; Metazoa - 161; Fungi - 658; Plants - 607; Viruses - 0; Other Eukaryotes - 471 (source: NCBI BLink). & (gnl|cdd|36268 : 802.0) no description available & (gnl|cdd|85165 : 596.0) no description available & (reliability: 2648.0) & (original description: Putative TPS7, Description = Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7, PFAM = PF00982;PF02358)' T '3.2.3' 'minor CHO metabolism.trehalose.potential TPS/TPP' 'niben101scf05948_800653-809194' '(at1g06410 : 1382.0) Encodes an enzyme putatively involved in trehalose biosynthesis. Though the protein has both trehalose-6-phosphate synthase (TPS)-like and trehalose-6-phosphate phosphatase (TPP)-like domains, neither activity has been detected in enzymatic assays nor has the protein been able to complement yeast TPS or TPP mutants.; trehalose-phosphatase/synthase 7 (TPS7); FUNCTIONS IN: transferase activity, transferring glycosyl groups, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose phosphatase/synthase 5 (TAIR:AT4G17770.1); Has 4234 Blast hits to 4163 proteins in 1008 species: Archae - 52; Bacteria - 2285; Metazoa - 161; Fungi - 658; Plants - 607; Viruses - 0; Other Eukaryotes - 471 (source: NCBI BLink). & (gnl|cdd|36268 : 821.0) no description available & (gnl|cdd|85165 : 599.0) no description available & (reliability: 2764.0) & (original description: Putative TPS7, Description = Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7, PFAM = PF02358;PF00982)' T '3.2.3' 'minor CHO metabolism.trehalose.potential TPS/TPP' 'niben101scf06275_20354-25113' '(at2g18700 : 1155.0) Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain.; trehalose phosphatase/synthase 11 (TPS11); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: trehalose biosynthetic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-phosphatase/synthase 9 (TAIR:AT1G23870.1); Has 4055 Blast hits to 3987 proteins in 991 species: Archae - 50; Bacteria - 2254; Metazoa - 170; Fungi - 657; Plants - 458; Viruses - 0; Other Eukaryotes - 466 (source: NCBI BLink). & (gnl|cdd|36268 : 779.0) no description available & (gnl|cdd|85165 : 574.0) no description available & (reliability: 2310.0) & (original description: Putative TPS11, Description = Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11, PFAM = PF02358;PF00982)' T '3.2.3' 'minor CHO metabolism.trehalose.potential TPS/TPP' 'niben101scf06734_5349-10166' '(at1g23870 : 1348.0) Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain.; trehalose-phosphatase/synthase 9 (TPS9); FUNCTIONS IN: transferase activity, transferring glycosyl groups, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-6-phosphatase synthase S8 (TAIR:AT1G70290.1); Has 4900 Blast hits to 4828 proteins in 1062 species: Archae - 56; Bacteria - 2863; Metazoa - 236; Fungi - 655; Plants - 621; Viruses - 0; Other Eukaryotes - 469 (source: NCBI BLink). & (gnl|cdd|36268 : 860.0) no description available & (gnl|cdd|85165 : 629.0) no description available & (reliability: 2696.0) & (original description: Putative TPS10, Description = Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10, PFAM = PF00982;PF02358)' T '3.2.3' 'minor CHO metabolism.trehalose.potential TPS/TPP' 'niben101scf11123_16158-20982' '(at2g18700 : 1155.0) Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain.; trehalose phosphatase/synthase 11 (TPS11); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: trehalose biosynthetic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-phosphatase/synthase 9 (TAIR:AT1G23870.1); Has 4055 Blast hits to 3987 proteins in 991 species: Archae - 50; Bacteria - 2254; Metazoa - 170; Fungi - 657; Plants - 458; Viruses - 0; Other Eukaryotes - 466 (source: NCBI BLink). & (gnl|cdd|36268 : 777.0) no description available & (gnl|cdd|85165 : 577.0) no description available & (reliability: 2310.0) & (original description: Putative TPS11, Description = Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11, PFAM = PF02358;PF00982)' T '3.2.3' 'minor CHO metabolism.trehalose.potential TPS/TPP' 'niben101scf19517_51463-56291' '(at2g18700 : 1196.0) Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain.; trehalose phosphatase/synthase 11 (TPS11); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: trehalose biosynthetic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-phosphatase/synthase 9 (TAIR:AT1G23870.1); Has 4055 Blast hits to 3987 proteins in 991 species: Archae - 50; Bacteria - 2254; Metazoa - 170; Fungi - 657; Plants - 458; Viruses - 0; Other Eukaryotes - 466 (source: NCBI BLink). & (gnl|cdd|36268 : 804.0) no description available & (gnl|cdd|85165 : 589.0) no description available & (reliability: 2392.0) & (original description: Putative TPS11, Description = Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11, PFAM = PF00982;PF02358)' T '3.2.4' 'minor CHO metabolism.trehalose.trehalase' 'niben101scf14394_82840-89433' '(at4g24040 : 630.0) Encodes a trehalase, member of Glycoside Hydrolase Family 37.; trehalase 1 (TRE1); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 37 (InterPro:IPR001661), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 37, conserved site (InterPro:IPR018232); Has 1925 Blast hits to 1909 proteins in 569 species: Archae - 2; Bacteria - 1056; Metazoa - 507; Fungi - 235; Plants - 71; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|85304 : 561.0) no description available & (gnl|cdd|35822 : 513.0) no description available & (reliability: 1260.0) & (original description: Putative treh, Description = Alpha-trehalose glucohydrolase, PFAM = PF01204)' T '3.2.1001' 'minor CHO metabolism.trehalose' 'trehalose' 'minor CHO metabolism.trehalose' M '3.3' 'minor CHO metabolism.sugar alcohols' 'niben101scf02688_484770-490284' '(at5g51970 : 630.0) Encodes a putative sorbitol dehydrogenase that can be thiolated in vitro.; GroES-like zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding alcohol dehydrogenase family protein (TAIR:AT5G63620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35247 : 443.0) no description available & (gnl|cdd|31263 : 252.0) no description available & (p93436|adhx_orysa : 89.0) Alcohol dehydrogenase class 3 (EC 1.1.1.1) (Alcohol dehydrogenase class III) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284) (Glutathione-dependent formaldehyde dehydrogenase) (FDH) (FALDH) (GSH-FDH) - Oryza sativa (Rice) & (reliability: 1260.0) & (original description: Putative SDH, Description = Sorbitol dehydrogenase, PFAM = PF08240;PF00107)' T '3.3' 'minor CHO metabolism.sugar alcohols' 'niben101scf04217_1153021-1156189' '(at5g51970 : 379.0) Encodes a putative sorbitol dehydrogenase that can be thiolated in vitro.; GroES-like zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding alcohol dehydrogenase family protein (TAIR:AT5G63620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35247 : 327.0) no description available & (gnl|cdd|31263 : 207.0) no description available & (reliability: 758.0) & (original description: Putative gutB, Description = Sorbitol dehydrogenase, PFAM = PF08240;PF00107)' T '3.3' 'minor CHO metabolism.sugar alcohols' 'niben101scf13280_11530-30888' '(at4g30310 : 983.0) FGGY family of carbohydrate kinase; FUNCTIONS IN: carbohydrate kinase activity, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485), Carbohydrate kinase, FGGY-related (InterPro:IPR006003); Has 12264 Blast hits to 12262 proteins in 2271 species: Archae - 128; Bacteria - 9718; Metazoa - 437; Fungi - 335; Plants - 71; Viruses - 0; Other Eukaryotes - 1575 (source: NCBI BLink). & (gnl|cdd|31267 : 547.0) no description available & (gnl|cdd|37728 : 480.0) no description available & (reliability: 1966.0) & (original description: Putative fggy, Description = FGGY carbohydrate kinase domain-containing protein, PFAM = PF00370;PF02782)' T '3.3.1001' 'minor CHO metabolism.sugar alcohols' 'sorbitol' 'minor CHO metabolism.polyols' M '3.3.1002' 'minor CHO metabolism.sugar alcohols' 'mannitol' 'minor CHO metabolism.polyols' M '3.3.1003' 'minor CHO metabolism.sugar alcohols' 'erythritol' 'minor CHO metabolism.polyols' M '3.3.1004' 'minor CHO metabolism.sugar alcohols' 'maltitol' 'minor CHO metabolism.polyols' M '3.3.1005' 'minor CHO metabolism.sugar alcohols' 'galactitol' 'minor CHO metabolism.polyols' M '3.3.1006' 'minor CHO metabolism.sugar alcohols' 'pinitol' 'minor CHO metabolism.polyols' M '3.3.1007' 'minor CHO metabolism.sugar alcohols' 'ononitol' 'minor CHO metabolism.polyols' M '3.3.1008' 'minor CHO metabolism.sugar alcohols' 'ribitol' 'minor CHO metabolism.polyols' M '3.3.1009' 'minor CHO metabolism.sugar alcohols' 'threitol' '' M '3.3.1010' 'minor CHO metabolism.sugar alcohols' 'sequoyitol' '' M '3.3.1011' 'minor CHO metabolism.sugar alcohols' 'viburnitol' '' M '3.3.1012' 'minor CHO metabolism.sugar alcohols' 'quebranchitol' '' M '3.4' 'minor CHO metabolism.myo-inositol' '' '' '3.4.1' 'minor CHO metabolism.myo-inositol.poly-phosphatases' 'nbv0.3scaffold25664_18025-24855' '(at4g18010 : 598.0) Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not appear to be active against phosphatidylinositol 4,5 bisphosphate. Overexpression of this gene renders plants insensitive to ABA in germination and growth assays.; INOSITOL(1,4,5)P3 5-PHOSPHATASE II (IP5PII); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G71710.2); Has 2627 Blast hits to 2054 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 957; Fungi - 640; Plants - 718; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|35786 : 230.0) no description available & (gnl|cdd|47467 : 192.0) no description available & (reliability: 1196.0) & (original description: Putative IP5P2, Description = Type I inositol polyphosphate 5-phosphatase 2, PFAM = PF03372)' T '3.4.1' 'minor CHO metabolism.myo-inositol.poly-phosphatases' 'nbv0.5scaffold155_541768-548598' '(at4g18010 : 528.0) Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not appear to be active against phosphatidylinositol 4,5 bisphosphate. Overexpression of this gene renders plants insensitive to ABA in germination and growth assays.; INOSITOL(1,4,5)P3 5-PHOSPHATASE II (IP5PII); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G71710.2); Has 2627 Blast hits to 2054 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 957; Fungi - 640; Plants - 718; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|35786 : 229.0) no description available & (gnl|cdd|47467 : 192.0) no description available & (reliability: 1056.0) & (original description: Putative 5P1, Description = Type I inositol-1,4,5-trisphosphate 5-phosphatase 2, PFAM = )' T '3.4.1' 'minor CHO metabolism.myo-inositol.poly-phosphatases' 'nbv0.5scaffold1588_106573-116395' '(at1g71710 : 502.0) DNAse I-like superfamily protein; FUNCTIONS IN: inositol-polyphosphate 5-phosphatase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: inositol polyphosphate 5-phosphatase I (TAIR:AT1G34120.1). & (gnl|cdd|35786 : 227.0) no description available & (gnl|cdd|47467 : 200.0) no description available & (reliability: 1004.0) & (original description: Putative IP5P1, Description = Type I inositol polyphosphate 5-phosphatase 1, PFAM = )' T '3.4.1' 'minor CHO metabolism.myo-inositol.poly-phosphatases' 'niben044scf00007942ctg018_2672-7085' '(at1g71710 : 273.0) DNAse I-like superfamily protein; FUNCTIONS IN: inositol-polyphosphate 5-phosphatase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: inositol polyphosphate 5-phosphatase I (TAIR:AT1G34120.1). & (reliability: 546.0) & (original description: Putative 5P1, Description = Type I inositol-1,4,5-trisphosphate 5-phosphatase 1, PFAM = )' T '3.4.1' 'minor CHO metabolism.myo-inositol.poly-phosphatases' 'niben044scf00011379ctg000_3529-9919' '(at4g18010 : 595.0) Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not appear to be active against phosphatidylinositol 4,5 bisphosphate. Overexpression of this gene renders plants insensitive to ABA in germination and growth assays.; INOSITOL(1,4,5)P3 5-PHOSPHATASE II (IP5PII); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G71710.2); Has 2627 Blast hits to 2054 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 957; Fungi - 640; Plants - 718; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|35786 : 230.0) no description available & (gnl|cdd|47467 : 192.0) no description available & (reliability: 1190.0) & (original description: Putative IP5P2, Description = Type I inositol polyphosphate 5-phosphatase 2, PFAM = PF03372)' T '3.4.1' 'minor CHO metabolism.myo-inositol.poly-phosphatases' 'niben101scf00526_239745-246608' '(at4g18010 : 584.0) Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not appear to be active against phosphatidylinositol 4,5 bisphosphate. Overexpression of this gene renders plants insensitive to ABA in germination and growth assays.; INOSITOL(1,4,5)P3 5-PHOSPHATASE II (IP5PII); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G71710.2); Has 2627 Blast hits to 2054 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 957; Fungi - 640; Plants - 718; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|35786 : 230.0) no description available & (gnl|cdd|47467 : 195.0) no description available & (reliability: 1168.0) & (original description: Putative IP5P2, Description = Type I inositol polyphosphate 5-phosphatase 2, PFAM = PF03372)' T '3.4.1' 'minor CHO metabolism.myo-inositol.poly-phosphatases' 'niben101scf05490_66476-72295' '(at4g18010 : 581.0) Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not appear to be active against phosphatidylinositol 4,5 bisphosphate. Overexpression of this gene renders plants insensitive to ABA in germination and growth assays.; INOSITOL(1,4,5)P3 5-PHOSPHATASE II (IP5PII); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G71710.2); Has 2627 Blast hits to 2054 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 957; Fungi - 640; Plants - 718; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|35786 : 231.0) no description available & (gnl|cdd|47467 : 200.0) no description available & (reliability: 1162.0) & (original description: Putative IP5P2, Description = Type I inositol polyphosphate 5-phosphatase 2, PFAM = PF03372)' T '3.4.1' 'minor CHO metabolism.myo-inositol.poly-phosphatases' 'niben101scf08308_113772-117595' '(at1g34120 : 115.0) Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not act on I(1)P, I(1,4)P2, or phosphatidylinositol(4,5)P2.; inositol polyphosphate 5-phosphatase I (IP5PI); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G71710.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative 5P1, Description = Type I inositol-1,4,5-trisphosphate 5-phosphatase 1, PFAM = )' T '3.4.1' 'minor CHO metabolism.myo-inositol.poly-phosphatases' 'niben101scf14542_101534-108451' '(at4g18010 : 526.0) Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not appear to be active against phosphatidylinositol 4,5 bisphosphate. Overexpression of this gene renders plants insensitive to ABA in germination and growth assays.; INOSITOL(1,4,5)P3 5-PHOSPHATASE II (IP5PII); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G71710.2); Has 2627 Blast hits to 2054 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 957; Fungi - 640; Plants - 718; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|35786 : 229.0) no description available & (gnl|cdd|47467 : 192.0) no description available & (reliability: 1052.0) & (original description: Putative BnaAnng12830D, Description = BnaAnng12830D protein, PFAM = )' T '3.4.1' 'minor CHO metabolism.myo-inositol.poly-phosphatases' 'niben101scf20077_124130-134752' '(at1g71710 : 577.0) DNAse I-like superfamily protein; FUNCTIONS IN: inositol-polyphosphate 5-phosphatase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: inositol polyphosphate 5-phosphatase I (TAIR:AT1G34120.1). & (gnl|cdd|35786 : 222.0) no description available & (gnl|cdd|47467 : 200.0) no description available & (reliability: 1154.0) & (original description: Putative IP5P3, Description = Type IV inositol polyphosphate 5-phosphatase 3, PFAM = PF03372)' T '3.4.2' 'minor CHO metabolism.myo-inositol.InsP-Kinases' 'nbv0.3scaffold60155_1-5229' '(at1g22100 : 215.0) Inositol-pentakisphosphate 2-kinase family protein; FUNCTIONS IN: inositol pentakisphosphate 2-kinase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Inositol-pentakisphosphate 2-kinase, metazoa (InterPro:IPR018009), Inositol-pentakisphosphate 2-kinase (InterPro:IPR009286); BEST Arabidopsis thaliana protein match is: Inositol-pentakisphosphate 2-kinase family protein (TAIR:AT1G59312.1); Has 235 Blast hits to 231 proteins in 87 species: Archae - 0; Bacteria - 0; Metazoa - 98; Fungi - 18; Plants - 92; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|69604 : 200.0) no description available & (gnl|cdd|39946 : 122.0) no description available & (reliability: 424.0) & (original description: Putative ipk1, Description = Inositol-pentakisphosphate 2-kinase, PFAM = PF06090)' T '3.4.2' 'minor CHO metabolism.myo-inositol.InsP-Kinases' 'nbv0.3scaffold60886_1-2964' '(at5g42810 : 242.0) Encodes an inositol tetra-/pentaphosphate 2-kinase, involved in the biosynthesis of phytic acid, a regulator of intracellular signaling, a highly abundant animal antinutrient, and a phosphate and mineral storage compound in plant seeds.; inositol-pentakisphosphate 2-kinase 1 (IPK1); CONTAINS InterPro DOMAIN/s: Inositol-pentakisphosphate 2-kinase, metazoa (InterPro:IPR018009), Inositol-pentakisphosphate 2-kinase (InterPro:IPR009286); BEST Arabidopsis thaliana protein match is: Inositol-pentakisphosphate 2-kinase family protein (TAIR:AT1G22100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69604 : 193.0) no description available & (gnl|cdd|39946 : 184.0) no description available & (reliability: 484.0) & (original description: Putative ipk1, Description = Inositol-pentakisphosphate 2-kinase, PFAM = PF06090)' T '3.4.2' 'minor CHO metabolism.myo-inositol.InsP-Kinases' 'nbv0.5scaffold947_432303-439171' '(at5g42810 : 453.0) Encodes an inositol tetra-/pentaphosphate 2-kinase, involved in the biosynthesis of phytic acid, a regulator of intracellular signaling, a highly abundant animal antinutrient, and a phosphate and mineral storage compound in plant seeds.; inositol-pentakisphosphate 2-kinase 1 (IPK1); CONTAINS InterPro DOMAIN/s: Inositol-pentakisphosphate 2-kinase, metazoa (InterPro:IPR018009), Inositol-pentakisphosphate 2-kinase (InterPro:IPR009286); BEST Arabidopsis thaliana protein match is: Inositol-pentakisphosphate 2-kinase family protein (TAIR:AT1G22100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69604 : 393.0) no description available & (gnl|cdd|39946 : 300.0) no description available & (reliability: 906.0) & (original description: Putative IPK1, Description = Inositol-pentakisphosphate 2-kinase, PFAM = PF06090)' T '3.4.2' 'minor CHO metabolism.myo-inositol.InsP-Kinases' 'niben044scf00016303ctg007_15683-19777' '(at5g42810 : 295.0) Encodes an inositol tetra-/pentaphosphate 2-kinase, involved in the biosynthesis of phytic acid, a regulator of intracellular signaling, a highly abundant animal antinutrient, and a phosphate and mineral storage compound in plant seeds.; inositol-pentakisphosphate 2-kinase 1 (IPK1); CONTAINS InterPro DOMAIN/s: Inositol-pentakisphosphate 2-kinase, metazoa (InterPro:IPR018009), Inositol-pentakisphosphate 2-kinase (InterPro:IPR009286); BEST Arabidopsis thaliana protein match is: Inositol-pentakisphosphate 2-kinase family protein (TAIR:AT1G22100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69604 : 249.0) no description available & (gnl|cdd|39946 : 218.0) no description available & (reliability: 590.0) & (original description: Putative ipk1, Description = Inositol-pentakisphosphate 2-kinase, PFAM = PF06090)' T '3.4.2' 'minor CHO metabolism.myo-inositol.InsP-Kinases' 'niben044scf00031655ctg005_814-6398' '(at5g61760 : 368.0) Encodes an inositol polyphosphate 3-/6-/5-kinase that is localized to the nucleus. Able to complement a mutation in a yeast transcriptional regulator gene (ARG82/IPK2).; inositol polyphosphate kinase 2 beta (IPK2BETA); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate kinase (InterPro:IPR005522); BEST Arabidopsis thaliana protein match is: inositol polyphosphate kinase 2 alpha (TAIR:AT5G07370.4); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36833 : 217.0) no description available & (gnl|cdd|86433 : 206.0) no description available & (reliability: 736.0) & (original description: Putative ipmk, Description = Inositol polyphosphate multikinase, PFAM = PF03770)' T '3.4.2' 'minor CHO metabolism.myo-inositol.InsP-Kinases' 'niben101scf02027_274732-277396' '(at5g61760 : 382.0) Encodes an inositol polyphosphate 3-/6-/5-kinase that is localized to the nucleus. Able to complement a mutation in a yeast transcriptional regulator gene (ARG82/IPK2).; inositol polyphosphate kinase 2 beta (IPK2BETA); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate kinase (InterPro:IPR005522); BEST Arabidopsis thaliana protein match is: inositol polyphosphate kinase 2 alpha (TAIR:AT5G07370.4); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36833 : 207.0) no description available & (gnl|cdd|86433 : 206.0) no description available & (reliability: 764.0) & (original description: Putative ipmk, Description = Inositol polyphosphate multikinase, PFAM = PF03770)' T '3.4.2' 'minor CHO metabolism.myo-inositol.InsP-Kinases' 'niben101scf02581_359198-362109' '(at5g61760 : 383.0) Encodes an inositol polyphosphate 3-/6-/5-kinase that is localized to the nucleus. Able to complement a mutation in a yeast transcriptional regulator gene (ARG82/IPK2).; inositol polyphosphate kinase 2 beta (IPK2BETA); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate kinase (InterPro:IPR005522); BEST Arabidopsis thaliana protein match is: inositol polyphosphate kinase 2 alpha (TAIR:AT5G07370.4); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36833 : 212.0) no description available & (gnl|cdd|86433 : 207.0) no description available & (reliability: 766.0) & (original description: Putative IPK2b, Description = Inositol polyphosphate multikinase beta, PFAM = PF03770)' T '3.4.2' 'minor CHO metabolism.myo-inositol.InsP-Kinases' 'niben101scf07579_483496-489083' '(at5g61760 : 367.0) Encodes an inositol polyphosphate 3-/6-/5-kinase that is localized to the nucleus. Able to complement a mutation in a yeast transcriptional regulator gene (ARG82/IPK2).; inositol polyphosphate kinase 2 beta (IPK2BETA); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate kinase (InterPro:IPR005522); BEST Arabidopsis thaliana protein match is: inositol polyphosphate kinase 2 alpha (TAIR:AT5G07370.4); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36833 : 219.0) no description available & (gnl|cdd|86433 : 206.0) no description available & (reliability: 734.0) & (original description: Putative ipmk, Description = Inositol polyphosphate multikinase, PFAM = PF03770)' T '3.4.2' 'minor CHO metabolism.myo-inositol.InsP-Kinases' 'niben101scf13523_53539-59439' '(at5g42810 : 454.0) Encodes an inositol tetra-/pentaphosphate 2-kinase, involved in the biosynthesis of phytic acid, a regulator of intracellular signaling, a highly abundant animal antinutrient, and a phosphate and mineral storage compound in plant seeds.; inositol-pentakisphosphate 2-kinase 1 (IPK1); CONTAINS InterPro DOMAIN/s: Inositol-pentakisphosphate 2-kinase, metazoa (InterPro:IPR018009), Inositol-pentakisphosphate 2-kinase (InterPro:IPR009286); BEST Arabidopsis thaliana protein match is: Inositol-pentakisphosphate 2-kinase family protein (TAIR:AT1G22100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69604 : 401.0) no description available & (gnl|cdd|39946 : 316.0) no description available & (reliability: 908.0) & (original description: Putative IPK1, Description = Inositol-pentakisphosphate 2-kinase, PFAM = PF06090)' T '3.4.3' 'minor CHO metabolism.myo-inositol.InsP Synthases' 'niben044scf00003142ctg008_8953-13720' '(q9lw96|ino1_tobac : 1014.0) Inositol-3-phosphate synthase (EC 5.5.1.4) (Myo-inositol-1-phosphate synthase) (MI-1-P synthase) (IPS) - Nicotiana tabacum (Common tobacco) & (at5g10170 : 957.0) myo-inositol-1-phosphate synthase isoform 3.Expressed in leaf, root and silique. Immunolocaliazation experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization.; myo-inositol-1-phosphate synthase 3 (MIPS3); FUNCTIONS IN: binding, inositol-3-phosphate synthase activity, catalytic activity; INVOLVED IN: metabolic process, inositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Myo-inositol-1-phosphate synthase (InterPro:IPR002587), Myo-inositol-1-phosphate synthase, GAPDH-like (InterPro:IPR013021), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: myo-inositol-1-phosphate synthase 2 (TAIR:AT2G22240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35912 : 926.0) no description available & (gnl|cdd|87426 : 521.0) no description available & (reliability: 1914.0) & (original description: Putative inl, Description = Inositol-3-phosphate synthase, PFAM = PF01658;PF07994)' T '3.4.3' 'minor CHO metabolism.myo-inositol.InsP Synthases' 'niben101scf02023_148002-154865' '(q9lw96|ino1_tobac : 992.0) Inositol-3-phosphate synthase (EC 5.5.1.4) (Myo-inositol-1-phosphate synthase) (MI-1-P synthase) (IPS) - Nicotiana tabacum (Common tobacco) & (at5g10170 : 947.0) myo-inositol-1-phosphate synthase isoform 3.Expressed in leaf, root and silique. Immunolocaliazation experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization.; myo-inositol-1-phosphate synthase 3 (MIPS3); FUNCTIONS IN: binding, inositol-3-phosphate synthase activity, catalytic activity; INVOLVED IN: metabolic process, inositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Myo-inositol-1-phosphate synthase (InterPro:IPR002587), Myo-inositol-1-phosphate synthase, GAPDH-like (InterPro:IPR013021), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: myo-inositol-1-phosphate synthase 2 (TAIR:AT2G22240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35912 : 919.0) no description available & (gnl|cdd|87426 : 522.0) no description available & (reliability: 1894.0) & (original description: Putative inl, Description = Inositol-3-phosphate synthase, PFAM = PF07994;PF01658)' T '3.4.3' 'minor CHO metabolism.myo-inositol.InsP Synthases' 'niben101scf06016_883120-888218' '(q9lw96|ino1_tobac : 994.0) Inositol-3-phosphate synthase (EC 5.5.1.4) (Myo-inositol-1-phosphate synthase) (MI-1-P synthase) (IPS) - Nicotiana tabacum (Common tobacco) & (at5g10170 : 939.0) myo-inositol-1-phosphate synthase isoform 3.Expressed in leaf, root and silique. Immunolocaliazation experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization.; myo-inositol-1-phosphate synthase 3 (MIPS3); FUNCTIONS IN: binding, inositol-3-phosphate synthase activity, catalytic activity; INVOLVED IN: metabolic process, inositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Myo-inositol-1-phosphate synthase (InterPro:IPR002587), Myo-inositol-1-phosphate synthase, GAPDH-like (InterPro:IPR013021), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: myo-inositol-1-phosphate synthase 2 (TAIR:AT2G22240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35912 : 931.0) no description available & (gnl|cdd|87426 : 527.0) no description available & (reliability: 1878.0) & (original description: Putative inl, Description = Inositol-3-phosphate synthase, PFAM = PF01658;PF07994)' T '3.4.4' 'minor CHO metabolism.myo-inositol.myo inositol oxygenases' 'nbv0.3scaffold26697_22644-27525' '(at2g19800 : 490.0) Encodes a myo-inositol oxygenase family gene.; myo-inositol oxygenase 2 (MIOX2); FUNCTIONS IN: inositol oxygenase activity; INVOLVED IN: syncytium formation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF706 (InterPro:IPR007828); BEST Arabidopsis thaliana protein match is: myo-inositol oxygenase 4 (TAIR:AT4G26260.2); Has 489 Blast hits to 489 proteins in 159 species: Archae - 0; Bacteria - 27; Metazoa - 132; Fungi - 130; Plants - 97; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (q5z8t3|miox_orysa : 465.0) Probable inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase) - Oryza sativa (Rice) & (gnl|cdd|68716 : 434.0) no description available & (gnl|cdd|36786 : 305.0) no description available & (reliability: 980.0) & (original description: Putative MIOX2, Description = Inositol oxygenase 2, PFAM = PF05153)' T '3.4.4' 'minor CHO metabolism.myo-inositol.myo inositol oxygenases' 'nbv0.3scaffold27157_3277-24160' '(at1g14520 : 439.0) Encodes MIOX1. Belongs to myo-inositol oxygenase gene family.; myo-inositol oxygenase 1 (MIOX1); FUNCTIONS IN: inositol oxygenase activity, oxidoreductase activity; INVOLVED IN: syncytium formation; LOCATED IN: cytoplasm; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF706 (InterPro:IPR007828); BEST Arabidopsis thaliana protein match is: myo-inositol oxygenase 2 (TAIR:AT2G19800.1); Has 482 Blast hits to 480 proteins in 154 species: Archae - 0; Bacteria - 27; Metazoa - 132; Fungi - 124; Plants - 97; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (q5z8t3|miox_orysa : 433.0) Probable inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase) - Oryza sativa (Rice) & (gnl|cdd|68716 : 420.0) no description available & (gnl|cdd|36786 : 296.0) no description available & (reliability: 878.0) & (original description: Putative MIOX1, Description = Inositol oxygenase 1, PFAM = PF05153)' T '3.4.4' 'minor CHO metabolism.myo-inositol.myo inositol oxygenases' 'nbv0.5scaffold4672_103928-112579' '(at2g19800 : 466.0) Encodes a myo-inositol oxygenase family gene.; myo-inositol oxygenase 2 (MIOX2); FUNCTIONS IN: inositol oxygenase activity; INVOLVED IN: syncytium formation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF706 (InterPro:IPR007828); BEST Arabidopsis thaliana protein match is: myo-inositol oxygenase 4 (TAIR:AT4G26260.2); Has 489 Blast hits to 489 proteins in 159 species: Archae - 0; Bacteria - 27; Metazoa - 132; Fungi - 130; Plants - 97; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (q5z8t3|miox_orysa : 444.0) Probable inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase) - Oryza sativa (Rice) & (gnl|cdd|68716 : 415.0) no description available & (gnl|cdd|36786 : 305.0) no description available & (reliability: 932.0) & (original description: Putative MIOX2, Description = Inositol oxygenase 2, PFAM = PF05153)' T '3.4.4' 'minor CHO metabolism.myo-inositol.myo inositol oxygenases' 'niben101scf03307_622629-625662' '(at1g14520 : 290.0) Encodes MIOX1. Belongs to myo-inositol oxygenase gene family.; myo-inositol oxygenase 1 (MIOX1); FUNCTIONS IN: inositol oxygenase activity, oxidoreductase activity; INVOLVED IN: syncytium formation; LOCATED IN: cytoplasm; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF706 (InterPro:IPR007828); BEST Arabidopsis thaliana protein match is: myo-inositol oxygenase 2 (TAIR:AT2G19800.1); Has 482 Blast hits to 480 proteins in 154 species: Archae - 0; Bacteria - 27; Metazoa - 132; Fungi - 124; Plants - 97; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (q5z8t3|miox_orysa : 283.0) Probable inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase) - Oryza sativa (Rice) & (gnl|cdd|68716 : 280.0) no description available & (gnl|cdd|36786 : 137.0) no description available & (reliability: 580.0) & (original description: Putative miox, Description = Inositol oxygenase, PFAM = PF05153)' T '3.4.4' 'minor CHO metabolism.myo-inositol.myo inositol oxygenases' 'niben101scf03307_622763-626856' '(at2g19800 : 449.0) Encodes a myo-inositol oxygenase family gene.; myo-inositol oxygenase 2 (MIOX2); FUNCTIONS IN: inositol oxygenase activity; INVOLVED IN: syncytium formation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF706 (InterPro:IPR007828); BEST Arabidopsis thaliana protein match is: myo-inositol oxygenase 4 (TAIR:AT4G26260.2); Has 489 Blast hits to 489 proteins in 159 species: Archae - 0; Bacteria - 27; Metazoa - 132; Fungi - 130; Plants - 97; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (q5z8t3|miox_orysa : 425.0) Probable inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase) - Oryza sativa (Rice) & (gnl|cdd|68716 : 419.0) no description available & (gnl|cdd|36786 : 308.0) no description available & (reliability: 898.0) & (original description: Putative MIOX2, Description = Inositol oxygenase 2, PFAM = PF05153)' T '3.4.4' 'minor CHO metabolism.myo-inositol.myo inositol oxygenases' 'niben101scf08230_56907-62698' '(at2g19800 : 484.0) Encodes a myo-inositol oxygenase family gene.; myo-inositol oxygenase 2 (MIOX2); FUNCTIONS IN: inositol oxygenase activity; INVOLVED IN: syncytium formation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF706 (InterPro:IPR007828); BEST Arabidopsis thaliana protein match is: myo-inositol oxygenase 4 (TAIR:AT4G26260.2); Has 489 Blast hits to 489 proteins in 159 species: Archae - 0; Bacteria - 27; Metazoa - 132; Fungi - 130; Plants - 97; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (q5z8t3|miox_orysa : 465.0) Probable inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase) - Oryza sativa (Rice) & (gnl|cdd|68716 : 433.0) no description available & (gnl|cdd|36786 : 305.0) no description available & (reliability: 968.0) & (original description: Putative MIOX2, Description = Inositol oxygenase 2, PFAM = PF05153)' T '3.4.4' 'minor CHO metabolism.myo-inositol.myo inositol oxygenases' 'niben101scf30621_3647-8591' '(q5z8t3|miox_orysa : 450.0) Probable inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase) - Oryza sativa (Rice) & (at1g14520 : 445.0) Encodes MIOX1. Belongs to myo-inositol oxygenase gene family.; myo-inositol oxygenase 1 (MIOX1); FUNCTIONS IN: inositol oxygenase activity, oxidoreductase activity; INVOLVED IN: syncytium formation; LOCATED IN: cytoplasm; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF706 (InterPro:IPR007828); BEST Arabidopsis thaliana protein match is: myo-inositol oxygenase 2 (TAIR:AT2G19800.1); Has 482 Blast hits to 480 proteins in 154 species: Archae - 0; Bacteria - 27; Metazoa - 132; Fungi - 124; Plants - 97; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|68716 : 426.0) no description available & (gnl|cdd|36786 : 295.0) no description available & (reliability: 890.0) & (original description: Putative MIOX1, Description = Inositol oxygenase 1, PFAM = PF05153)' T '3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'nbv0.3scaffold43030_7621-18023' '(at3g02870 : 407.0) Encodes a L-galactose-1-phosphate phosphatase, involved in ascorbate biosynthesis.; VTC4; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, L-galactose-1-phosphate phosphatase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process, L-ascorbic acid biosynthetic process, response to karrikin, response to cold, inositol biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, Lithium-sensitive (InterPro:IPR020552), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: myo-inositol monophosphatase like 1 (TAIR:AT1G31190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o49071|impp_mescr : 400.0) Inositol monophosphatase (EC 3.1.3.25) (IMPase) (IMP) (Inositol-1(or 4)-monophosphatase) - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|38162 : 329.0) no description available & (gnl|cdd|30137 : 312.0) no description available & (reliability: 814.0) & (original description: Putative IMP3, Description = Inositol monophosphatase 3, PFAM = PF00459)' T '3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'nbv0.3scaffold51801_6395-9490' '(at4g39120 : 220.0) Encodes a chloroplast-localized member of the myo-inositol monophosphatase family, IMPL2 (myo-Inositol monophosphatase like 2) that seems to have multiple enzymatic activities. It contributes to histidine biosynthesis based on it histidinol-phosphate phosphatase activity. In addition, the protein can act as an inositol monophosphatase and an L-galactose-1-phosphate phosphatase in vitro.; myo-inositol monophosphatase like 2 (IMPL2); FUNCTIONS IN: histidinol-phosphatase activity, 3'(2'),5'-bisphosphate nucleotidase activity, L-galactose-1-phosphate phosphatase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process, histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidinol-phosphate phosphatase, putative, inositol monophosphatase (InterPro:IPR011809), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT3G02870.1); Has 15134 Blast hits to 15130 proteins in 2267 species: Archae - 157; Bacteria - 8374; Metazoa - 557; Fungi - 304; Plants - 238; Viruses - 0; Other Eukaryotes - 5504 (source: NCBI BLink). & (gnl|cdd|30139 : 207.0) no description available & (gnl|cdd|38162 : 163.0) no description available & (reliability: 440.0) & (original description: Putative hisN, Description = Histidinol phosphate phosphatase, PFAM = PF00459)' T '3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'nbv0.5scaffold8_1983916-1994901' '(at1g05630 : 1477.0) Encodes an inositol polyphosphate 5-phosphatase with phosphatase activity toward only Ins(1,4,5)P3. Induced in response to ABA and wounding treatments. Expressed in young seedlings and flowers, while no transcripts were detectable in maturated roots, stems, and rosette leaves Modulates the development of cotyledon veins through its regulation of auxin homeostasis. Involved in blue light lightñstimulated increase in cytosolic calcium ion.; 5PTASE13; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: endonuclease/exonuclease/phosphatase family protein (TAIR:AT2G31830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34970 : 143.0) no description available & (gnl|cdd|35786 : 125.0) no description available & (reliability: 2954.0) & (original description: Putative IP5P12, Description = Type I inositol polyphosphate 5-phosphatase 12, PFAM = PF03372)' T '3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'nbv0.5scaffold2641_244652-263053' '(at1g31190 : 468.0) Encodes a myo-inositol monophosphatase IMPL1 (myo-Inositol monophosphatase like 1).; myo-inositol monophosphatase like 1 (IMPL1); FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT3G02870.3); Has 14949 Blast hits to 14933 proteins in 2333 species: Archae - 246; Bacteria - 8365; Metazoa - 464; Fungi - 305; Plants - 295; Viruses - 0; Other Eukaryotes - 5274 (source: NCBI BLink). & (gnl|cdd|30137 : 262.0) no description available & (gnl|cdd|38162 : 189.0) no description available & (o49071|impp_mescr : 128.0) Inositol monophosphatase (EC 3.1.3.25) (IMPase) (IMP) (Inositol-1(or 4)-monophosphatase) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 936.0) & (original description: Putative hisN, Description = Histidinol-phosphate phosphatase, putative, PFAM = PF00459)' T '3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'nbv0.5scaffold3981_174729-183495' '(at1g31190 : 462.0) Encodes a myo-inositol monophosphatase IMPL1 (myo-Inositol monophosphatase like 1).; myo-inositol monophosphatase like 1 (IMPL1); FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT3G02870.3); Has 14949 Blast hits to 14933 proteins in 2333 species: Archae - 246; Bacteria - 8365; Metazoa - 464; Fungi - 305; Plants - 295; Viruses - 0; Other Eukaryotes - 5274 (source: NCBI BLink). & (gnl|cdd|30137 : 257.0) no description available & (gnl|cdd|38162 : 183.0) no description available & (o49071|impp_mescr : 124.0) Inositol monophosphatase (EC 3.1.3.25) (IMPase) (IMP) (Inositol-1(or 4)-monophosphatase) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 924.0) & (original description: Putative hisN, Description = Histidinol-phosphate phosphatase, putative, PFAM = PF00459)' T '3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'nbv0.5scaffold4842_158819-172127' '(at1g65580 : 1357.0) FRAGILE FIBER3 (FRA3); FUNCTIONS IN: inositol or phosphatidylinositol phosphatase activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Endonuclease/exonuclease/phosphatase family protein (TAIR:AT2G43900.1); Has 2602 Blast hits to 2499 proteins in 289 species: Archae - 0; Bacteria - 180; Metazoa - 887; Fungi - 607; Plants - 609; Viruses - 0; Other Eukaryotes - 319 (source: NCBI BLink). & (gnl|cdd|35786 : 236.0) no description available & (gnl|cdd|47467 : 225.0) no description available & (reliability: 2494.0) & (original description: Putative IP5P15, Description = Type II inositol polyphosphate 5-phosphatase 15, PFAM = PF03372)' T '3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'niben044scf00023067ctg000_1-9476' '(at1g05630 : 1413.0) Encodes an inositol polyphosphate 5-phosphatase with phosphatase activity toward only Ins(1,4,5)P3. Induced in response to ABA and wounding treatments. Expressed in young seedlings and flowers, while no transcripts were detectable in maturated roots, stems, and rosette leaves Modulates the development of cotyledon veins through its regulation of auxin homeostasis. Involved in blue light lightñstimulated increase in cytosolic calcium ion.; 5PTASE13; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: endonuclease/exonuclease/phosphatase family protein (TAIR:AT2G31830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35786 : 127.0) no description available & (gnl|cdd|47467 : 126.0) no description available & (reliability: 2826.0) & (original description: Putative IP5P12, Description = Type I inositol polyphosphate 5-phosphatase 12, PFAM = PF03372)' T '3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'niben101scf00303_22447-29852' '(at3g02870 : 412.0) Encodes a L-galactose-1-phosphate phosphatase, involved in ascorbate biosynthesis.; VTC4; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, L-galactose-1-phosphate phosphatase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process, L-ascorbic acid biosynthetic process, response to karrikin, response to cold, inositol biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, Lithium-sensitive (InterPro:IPR020552), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: myo-inositol monophosphatase like 1 (TAIR:AT1G31190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o49071|impp_mescr : 405.0) Inositol monophosphatase (EC 3.1.3.25) (IMPase) (IMP) (Inositol-1(or 4)-monophosphatase) - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|38162 : 332.0) no description available & (gnl|cdd|30137 : 316.0) no description available & (reliability: 824.0) & (original description: Putative IMP3, Description = Inositol monophosphatase 3, PFAM = PF00459)' T '3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'niben101scf02174_371532-381190' '(at1g31190 : 506.0) Encodes a myo-inositol monophosphatase IMPL1 (myo-Inositol monophosphatase like 1).; myo-inositol monophosphatase like 1 (IMPL1); FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT3G02870.3); Has 14949 Blast hits to 14933 proteins in 2333 species: Archae - 246; Bacteria - 8365; Metazoa - 464; Fungi - 305; Plants - 295; Viruses - 0; Other Eukaryotes - 5274 (source: NCBI BLink). & (gnl|cdd|30137 : 268.0) no description available & (gnl|cdd|38162 : 190.0) no description available & (o49071|impp_mescr : 132.0) Inositol monophosphatase (EC 3.1.3.25) (IMPase) (IMP) (Inositol-1(or 4)-monophosphatase) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 1012.0) & (original description: Putative IMPL1, Description = Phosphatase IMPL1, chloroplastic, PFAM = PF00459)' T '3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'niben101scf02190_430006-440192' '(at2g43900 : 1488.0) Endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: inositol-polyphosphate 5-phosphatase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: sperm cell, male gametophyte, flower, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Endonuclease/exonuclease/phosphatase family protein (TAIR:AT1G05630.2); Has 8064 Blast hits to 7016 proteins in 490 species: Archae - 18; Bacteria - 518; Metazoa - 2458; Fungi - 805; Plants - 729; Viruses - 32; Other Eukaryotes - 3504 (source: NCBI BLink). & (gnl|cdd|35786 : 221.0) no description available & (gnl|cdd|47467 : 217.0) no description available & (reliability: 2862.0) & (original description: Putative IP5P12, Description = Type I inositol polyphosphate 5-phosphatase 12, PFAM = PF03372)' T '3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'niben101scf03321_415233-425280' '(at2g43900 : 1501.0) Endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: inositol-polyphosphate 5-phosphatase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: sperm cell, male gametophyte, flower, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Endonuclease/exonuclease/phosphatase family protein (TAIR:AT1G05630.2); Has 8064 Blast hits to 7016 proteins in 490 species: Archae - 18; Bacteria - 518; Metazoa - 2458; Fungi - 805; Plants - 729; Viruses - 32; Other Eukaryotes - 3504 (source: NCBI BLink). & (gnl|cdd|35786 : 228.0) no description available & (gnl|cdd|47467 : 214.0) no description available & (reliability: 2906.0) & (original description: Putative IP5P12, Description = Type I inositol polyphosphate 5-phosphatase 12, PFAM = PF03372)' T '3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'niben101scf03867_276385-290273' '(at1g31190 : 516.0) Encodes a myo-inositol monophosphatase IMPL1 (myo-Inositol monophosphatase like 1).; myo-inositol monophosphatase like 1 (IMPL1); FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT3G02870.3); Has 14949 Blast hits to 14933 proteins in 2333 species: Archae - 246; Bacteria - 8365; Metazoa - 464; Fungi - 305; Plants - 295; Viruses - 0; Other Eukaryotes - 5274 (source: NCBI BLink). & (gnl|cdd|30137 : 271.0) no description available & (gnl|cdd|38162 : 194.0) no description available & (o49071|impp_mescr : 135.0) Inositol monophosphatase (EC 3.1.3.25) (IMPase) (IMP) (Inositol-1(or 4)-monophosphatase) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 1032.0) & (original description: Putative IMPL1, Description = Phosphatase IMPL1, chloroplastic, PFAM = PF00459)' T '3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'niben101scf04861_1-10750' '(at4g39120 : 460.0) Encodes a chloroplast-localized member of the myo-inositol monophosphatase family, IMPL2 (myo-Inositol monophosphatase like 2) that seems to have multiple enzymatic activities. It contributes to histidine biosynthesis based on it histidinol-phosphate phosphatase activity. In addition, the protein can act as an inositol monophosphatase and an L-galactose-1-phosphate phosphatase in vitro.; myo-inositol monophosphatase like 2 (IMPL2); FUNCTIONS IN: histidinol-phosphatase activity, 3'(2'),5'-bisphosphate nucleotidase activity, L-galactose-1-phosphate phosphatase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process, histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidinol-phosphate phosphatase, putative, inositol monophosphatase (InterPro:IPR011809), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT3G02870.1); Has 15134 Blast hits to 15130 proteins in 2267 species: Archae - 157; Bacteria - 8374; Metazoa - 557; Fungi - 304; Plants - 238; Viruses - 0; Other Eukaryotes - 5504 (source: NCBI BLink). & (gnl|cdd|30139 : 332.0) no description available & (gnl|cdd|38162 : 257.0) no description available & (o49071|impp_mescr : 95.1) Inositol monophosphatase (EC 3.1.3.25) (IMPase) (IMP) (Inositol-1(or 4)-monophosphatase) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 920.0) & (original description: Putative HISN7, Description = Bifunctional phosphatase IMPL2, chloroplastic, PFAM = PF00459)' T '3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'niben101scf05040_22046-40861' '(at1g05630 : 616.0) Encodes an inositol polyphosphate 5-phosphatase with phosphatase activity toward only Ins(1,4,5)P3. Induced in response to ABA and wounding treatments. Expressed in young seedlings and flowers, while no transcripts were detectable in maturated roots, stems, and rosette leaves Modulates the development of cotyledon veins through its regulation of auxin homeostasis. Involved in blue light lightñstimulated increase in cytosolic calcium ion.; 5PTASE13; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: endonuclease/exonuclease/phosphatase family protein (TAIR:AT2G31830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1232.0) & (original description: Putative D50, Description = Type I inositol-1,4,5-trisphosphate 5-phosphatase, PFAM = )' T '3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'niben101scf23998_124384-133920' '(at2g43900 : 1401.0) Endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: inositol-polyphosphate 5-phosphatase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: sperm cell, male gametophyte, flower, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Endonuclease/exonuclease/phosphatase family protein (TAIR:AT1G05630.2); Has 8064 Blast hits to 7016 proteins in 490 species: Archae - 18; Bacteria - 518; Metazoa - 2458; Fungi - 805; Plants - 729; Viruses - 32; Other Eukaryotes - 3504 (source: NCBI BLink). & (gnl|cdd|35786 : 227.0) no description available & (gnl|cdd|47467 : 221.0) no description available & (reliability: 2710.0) & (original description: Putative Sb04g018960, Description = Putative uncharacterized protein Sb04g018960, PFAM = PF03372)' T '3.4.1001' 'minor CHO metabolism.myo-inositol' 'inositol' 'minor CHO metabolism.inositol' M '3.4.1002' 'minor CHO metabolism.myo-inositol' 'inositol-1-p' 'minor CHO metabolism.inositol' M '3.4.1003' 'minor CHO metabolism.myo-inositol' 'triphosphoinositide' 'minor CHO metabolism.inositol' M '3.4.1004' 'minor CHO metabolism.myo-inositol' 'inositol-2-p' 'minor CHO metabolism.inositol' M '3.5' 'minor CHO metabolism.others' 'nbv0.3scaffold13385_14609-25490' '(at4g28706 : 458.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT5G43910.2). & (gnl|cdd|29367 : 270.0) no description available & (gnl|cdd|38158 : 93.1) no description available & (reliability: 916.0) & (original description: Putative COCSUDRAFT_17448, Description = PfkB-type carbohydrate kinase, PFAM = PF00294)' T '3.5' 'minor CHO metabolism.others' 'nbv0.3scaffold13576_589-5164' '(at1g17160 : 466.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT1G06030.1); Has 20525 Blast hits to 20525 proteins in 2560 species: Archae - 370; Bacteria - 15982; Metazoa - 398; Fungi - 241; Plants - 483; Viruses - 0; Other Eukaryotes - 3051 (source: NCBI BLink). & (gnl|cdd|29358 : 301.0) no description available & (gnl|cdd|38066 : 250.0) no description available & (reliability: 932.0) & (original description: Putative rbsK, Description = Ribokinase, PFAM = PF00294)' T '3.5' 'minor CHO metabolism.others' 'nbv0.3scaffold16405_7216-11018' '(at3g47800 : 475.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: aldose 1-epimerase activity; INVOLVED IN: galactose metabolic process, hexose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Aldose 1-epimerase, subgroup (InterPro:IPR015443), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT5G15140.1); Has 4663 Blast hits to 4656 proteins in 1452 species: Archae - 5; Bacteria - 3197; Metazoa - 273; Fungi - 257; Plants - 219; Viruses - 0; Other Eukaryotes - 712 (source: NCBI BLink). & (gnl|cdd|36817 : 412.0) no description available & (gnl|cdd|83683 : 275.0) no description available & (reliability: 950.0) & (original description: Putative mro, Description = Aldose 1-epimerase, PFAM = PF01263)' T '3.5' 'minor CHO metabolism.others' 'nbv0.3scaffold18585_1-4876' '(at5g14500 : 476.0) aldose 1-epimerase family protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G01590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36807 : 435.0) no description available & (gnl|cdd|31020 : 172.0) no description available & (reliability: 952.0) & (original description: Putative RCOM_1064700, Description = Aldose 1-epimerase, putative, PFAM = PF01263)' T '3.5' 'minor CHO metabolism.others' 'nbv0.3scaffold20833_1873-13742' '(at5g11980 : 834.0) conserved oligomeric Golgi complex component-related / COG complex component-related; CONTAINS InterPro DOMAIN/s: Conserved oligomeric Golgi complex, subunit 8 (InterPro:IPR016632), Dor1-like protein (InterPro:IPR007255); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37280 : 534.0) no description available & (gnl|cdd|67729 : 372.0) no description available & (reliability: 1668.0) & (original description: Putative COG8, Description = Component of oligomeric golgi complex 8, PFAM = PF04124)' T '3.5' 'minor CHO metabolism.others' 'nbv0.3scaffold34873_20458-26191' '(at4g27600 : 248.0) Encodes a phosphofructokinase B-type carbohydrate kinase family protein, NARA5. Regulates photosynthetic gene expression.; GENES NECESSARY FOR THE ACHIEVEMENT OF RUBISCO ACCUMULATION 5 (NARA5); CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT1G19600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38065 : 145.0) no description available & (gnl|cdd|29352 : 126.0) no description available & (reliability: 496.0) & (original description: Putative NARA5, Description = Putative sugar kinase, PFAM = PF00294)' T '3.5' 'minor CHO metabolism.others' 'nbv0.3scaffold48836_3178-13388' '(at5g19150 : 452.0) pfkB-like carbohydrate kinase family protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, carbohydrate kinase-related (InterPro:IPR000631); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39177 : 312.0) no description available & (gnl|cdd|29355 : 216.0) no description available & (reliability: 904.0) & (original description: Putative naxd, Description = ATP-dependent (S)-NAD(P)H-hydrate dehydratase, PFAM = PF01256)' T '3.5' 'minor CHO metabolism.others' 'nbv0.3scaffold69123_4833-9511' '(at3g61610 : 492.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, N-terminal protein myristoylation, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT4G23730.1); Has 2031 Blast hits to 2028 proteins in 827 species: Archae - 0; Bacteria - 1385; Metazoa - 39; Fungi - 135; Plants - 269; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink). & (gnl|cdd|36807 : 445.0) no description available & (gnl|cdd|31020 : 180.0) no description available & (reliability: 984.0) & (original description: Putative Sb03g030040, Description = Putative uncharacterized protein Sb03g030040, PFAM = PF01263)' T '3.5' 'minor CHO metabolism.others' 'nbv0.5scaffold121_429227-436715' '(at1g06690 : 576.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT5G53580.1); Has 30017 Blast hits to 30001 proteins in 2563 species: Archae - 570; Bacteria - 19734; Metazoa - 1881; Fungi - 2197; Plants - 1331; Viruses - 0; Other Eukaryotes - 4304 (source: NCBI BLink). & (gnl|cdd|36788 : 254.0) no description available & (gnl|cdd|31011 : 220.0) no description available & (p40691|a115_tobac : 82.8) Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) & (reliability: 1152.0) & (original description: Putative alr2, Description = Aldo/keto reductase, PFAM = PF00248)' T '3.5' 'minor CHO metabolism.others' 'nbv0.5scaffold207_516836-523399' '(at1g19600 : 443.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: D-ribose catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT4G27600.1); Has 11746 Blast hits to 11745 proteins in 2087 species: Archae - 257; Bacteria - 7533; Metazoa - 331; Fungi - 90; Plants - 444; Viruses - 0; Other Eukaryotes - 3091 (source: NCBI BLink). & (gnl|cdd|29352 : 257.0) no description available & (gnl|cdd|38065 : 227.0) no description available & (reliability: 886.0) & (original description: Putative 7H8, Description = Putative ribokinase, PFAM = PF00294)' T '3.5' 'minor CHO metabolism.others' 'nbv0.5scaffold1841_71908-92523' '(at1g48430 : 748.0) Dihydroxyacetone kinase; FUNCTIONS IN: glycerone kinase activity, ATP binding; INVOLVED IN: glycerol metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dak phosphatase (InterPro:IPR004007), Dihydroxyacetone kinase (InterPro:IPR012734), Dak kinase (InterPro:IPR004006); BEST Arabidopsis thaliana protein match is: Dihydroxyacetone kinase (TAIR:AT3G17770.1); Has 5033 Blast hits to 5026 proteins in 1105 species: Archae - 14; Bacteria - 4080; Metazoa - 97; Fungi - 207; Plants - 69; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink). & (gnl|cdd|37637 : 598.0) no description available & (gnl|cdd|86078 : 372.0) no description available & (o49227|dhbk_soybn : 84.7) Putative 3,4-dihydroxy-2-butanone kinase (EC 2.7.1.-) (Fragment) - Glycine max (Soybean) & (reliability: 1496.0) & (original description: Putative DHBK, Description = Putative 3,4-dihydroxy-2-butanone kinase, PFAM = PF02734;PF02733)' T '3.5' 'minor CHO metabolism.others' 'nbv0.5scaffold3085_136290-143843' '(at4g28706 : 438.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT5G43910.2). & (gnl|cdd|29367 : 252.0) no description available & (gnl|cdd|38066 : 81.9) no description available & (reliability: 876.0) & (original description: Putative At5g43910, Description = PfkB-like carbohydrate kinase family protein, PFAM = PF00294;PF00294)' T '3.5' 'minor CHO metabolism.others' 'nbv0.5scaffold3896_61517-165064' '(at1g55120 : 121.0) Encodes a protein with fructan exohydrolase (FEH) activity acting on levan-type fructans (6-FEH, levanase). The enzyme does not have invertase activity.; beta-fructofuranosidase 5 (FRUCT5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, levanase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 32 protein (TAIR:AT3G13790.2). & (gnl|cdd|35449 : 112.0) no description available & (q56ud1|inv5_orysa : 107.0) Beta-fructofuranosidase, insoluble isoenzyme 5 (EC 3.2.1.26) (Sucrose hydrolase 5) (Invertase 5) (Cell wall beta-fructosidase 5) (OsCIN5) (Fragment) - Oryza sativa (Rice) & (reliability: 242.0) & (original description: Putative aleh2, Description = Cell wall invertase, PFAM = PF08244)' T '3.5' 'minor CHO metabolism.others' 'nbv0.5scaffold9160_18879-24463' '(at5g58730 : 362.0) pfkB-like carbohydrate kinase family protein; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT4G10260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38066 : 138.0) no description available & (gnl|cdd|30870 : 88.7) no description available & (reliability: 724.0) & (original description: Putative At5g58730, Description = Inositol 3-kinase, PFAM = PF00294)' T '3.5' 'minor CHO metabolism.others' 'niben044scf00001298ctg006_9642-14962' '(at2g27680 : 585.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G06690.1); Has 12729 Blast hits to 12722 proteins in 1987 species: Archae - 303; Bacteria - 10047; Metazoa - 110; Fungi - 525; Plants - 450; Viruses - 0; Other Eukaryotes - 1294 (source: NCBI BLink). & (gnl|cdd|36788 : 249.0) no description available & (gnl|cdd|84642 : 166.0) no description available & (reliability: 1170.0) & (original description: Putative RSP5, Description = Flagellar radial spoke protein 5, PFAM = PF00248)' T '3.5' 'minor CHO metabolism.others' 'niben044scf00012575ctg007_1805-13781' '(at1g04420 : 395.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: potassium channel beta subunit 1 (TAIR:AT1G04690.1); Has 28623 Blast hits to 28597 proteins in 2530 species: Archae - 619; Bacteria - 18927; Metazoa - 1497; Fungi - 1929; Plants - 977; Viruses - 0; Other Eukaryotes - 4674 (source: NCBI BLink). & (gnl|cdd|83360 : 223.0) no description available & (gnl|cdd|36788 : 174.0) no description available & (reliability: 790.0) & (original description: Putative tas, Description = Protein tas, PFAM = PF00248)' T '3.5' 'minor CHO metabolism.others' 'niben044scf00020661ctg004_2186-8760' '(at1g04420 : 294.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: potassium channel beta subunit 1 (TAIR:AT1G04690.1); Has 28623 Blast hits to 28597 proteins in 2530 species: Archae - 619; Bacteria - 18927; Metazoa - 1497; Fungi - 1929; Plants - 977; Viruses - 0; Other Eukaryotes - 4674 (source: NCBI BLink). & (gnl|cdd|83360 : 151.0) no description available & (gnl|cdd|36788 : 141.0) no description available & (reliability: 588.0) & (original description: Putative gpr, Description = Aldo/keto reductase, PFAM = PF00248)' T '3.5' 'minor CHO metabolism.others' 'niben044scf00025049ctg001_2230-5266' '(at1g55120 : 225.0) Encodes a protein with fructan exohydrolase (FEH) activity acting on levan-type fructans (6-FEH, levanase). The enzyme does not have invertase activity.; beta-fructofuranosidase 5 (FRUCT5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, levanase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 32 protein (TAIR:AT3G13790.2). & (gnl|cdd|35449 : 207.0) no description available & (q56ud1|inv5_orysa : 197.0) Beta-fructofuranosidase, insoluble isoenzyme 5 (EC 3.2.1.26) (Sucrose hydrolase 5) (Invertase 5) (Cell wall beta-fructosidase 5) (OsCIN5) (Fragment) - Oryza sativa (Rice) & (reliability: 450.0) & (original description: Putative lin5, Description = Cell wall invertase, PFAM = PF08244)' T '3.5' 'minor CHO metabolism.others' 'niben044scf00026042ctg006_408-2960' '(at5g57330 : 201.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G61610.1); Has 1923 Blast hits to 1920 proteins in 763 species: Archae - 0; Bacteria - 1269; Metazoa - 39; Fungi - 135; Plants - 272; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink). & (gnl|cdd|36807 : 188.0) no description available & (gnl|cdd|85346 : 86.2) no description available & (reliability: 402.0) & (original description: Putative BnaC08g14350D, Description = BnaC08g14350D protein, PFAM = PF01263)' T '3.5' 'minor CHO metabolism.others' 'niben044scf00029281ctg000_3254-11004' '(at1g06690 : 581.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT5G53580.1); Has 30017 Blast hits to 30001 proteins in 2563 species: Archae - 570; Bacteria - 19734; Metazoa - 1881; Fungi - 2197; Plants - 1331; Viruses - 0; Other Eukaryotes - 4304 (source: NCBI BLink). & (gnl|cdd|36788 : 253.0) no description available & (gnl|cdd|31011 : 216.0) no description available & (p40691|a115_tobac : 85.1) Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) & (reliability: 1162.0) & (original description: Putative alr2, Description = Aldo/keto reductase, PFAM = PF00248)' T '3.5' 'minor CHO metabolism.others' 'niben044scf00030754ctg009_13643-19539' '(at4g23730 : 441.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G61610.1); Has 2244 Blast hits to 2241 proteins in 942 species: Archae - 0; Bacteria - 1605; Metazoa - 39; Fungi - 135; Plants - 255; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36807 : 440.0) no description available & (gnl|cdd|31020 : 193.0) no description available & (reliability: 882.0) & (original description: Putative At3g01590, Description = Putative glucose-6-phosphate 1-epimerase, PFAM = PF01263)' T '3.5' 'minor CHO metabolism.others' 'niben044scf00038439ctg003_5784-11476' '(at5g58730 : 387.0) pfkB-like carbohydrate kinase family protein; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT4G10260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38066 : 132.0) no description available & (gnl|cdd|30870 : 84.1) no description available & (reliability: 774.0) & (original description: Putative At5g58730, Description = Inositol 3-kinase, PFAM = PF00294)' T '3.5' 'minor CHO metabolism.others' 'niben101scf00305_425378-441818' '(at5g66530 : 442.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT5G57330.1). & (gnl|cdd|36807 : 306.0) no description available & (gnl|cdd|31020 : 138.0) no description available & (reliability: 884.0) & (original description: Putative BnaA07g12540D, Description = BnaA07g12540D protein, PFAM = PF01263)' T '3.5' 'minor CHO metabolism.others' 'niben101scf00466_348308-352975' '(at2g21250 : 544.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G21260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p28475|s6pd_maldo : 458.0) NADP-dependent D-sorbitol-6-phosphate dehydrogenase (EC 1.1.1.200) (Aldose-6-phosphate reductase [NADPH]) (NADP-S6PDH) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|36790 : 366.0) no description available & (gnl|cdd|84642 : 319.0) no description available & (reliability: 1088.0) & (original description: Putative m6pr, Description = NADPH-dependent mannose 6-phosphate reductase, PFAM = PF00248)' T '3.5' 'minor CHO metabolism.others' 'niben101scf00470_610857-616920' '(at3g61610 : 419.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, N-terminal protein myristoylation, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT4G23730.1); Has 2031 Blast hits to 2028 proteins in 827 species: Archae - 0; Bacteria - 1385; Metazoa - 39; Fungi - 135; Plants - 269; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink). & (gnl|cdd|36807 : 404.0) no description available & (gnl|cdd|31020 : 168.0) no description available & (reliability: 838.0) & (original description: Putative At3g01590, Description = Putative glucose-6-phosphate 1-epimerase, PFAM = PF01263)' T '3.5' 'minor CHO metabolism.others' 'niben101scf00573_602387-606361' '(at5g58730 : 345.0) pfkB-like carbohydrate kinase family protein; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT4G10260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38066 : 137.0) no description available & (gnl|cdd|84674 : 86.2) no description available & (reliability: 690.0) & (original description: Putative MIK, Description = Myo-inositol kinase, PFAM = PF00294)' T '3.5' 'minor CHO metabolism.others' 'niben101scf00586_42581-54795' '(at2g37790 : 512.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G37770.2); Has 24755 Blast hits to 24730 proteins in 2482 species: Archae - 413; Bacteria - 16802; Metazoa - 2096; Fungi - 1772; Plants - 1239; Viruses - 0; Other Eukaryotes - 2433 (source: NCBI BLink). & (gnl|cdd|36790 : 391.0) no description available & (gnl|cdd|84642 : 313.0) no description available & (q7g764|nado1_orysa : 253.0) Probable NAD(P)H-dependent oxidoreductase 1 (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 1024.0) & (original description: Putative ar1, Description = Aldo-keto reductase family 4 member C9, PFAM = PF00248)' T '3.5' 'minor CHO metabolism.others' 'niben101scf00594_527285-534736' '(at5g19150 : 415.0) pfkB-like carbohydrate kinase family protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, carbohydrate kinase-related (InterPro:IPR000631); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39177 : 288.0) no description available & (gnl|cdd|29355 : 204.0) no description available & (reliability: 830.0) & (original description: Putative naxd, Description = ATP-dependent (S)-NAD(P)H-hydrate dehydratase, PFAM = PF01256)' T '3.5' 'minor CHO metabolism.others' 'niben101scf00698_168981-201893' '(at1g06690 : 578.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT5G53580.1); Has 30017 Blast hits to 30001 proteins in 2563 species: Archae - 570; Bacteria - 19734; Metazoa - 1881; Fungi - 2197; Plants - 1331; Viruses - 0; Other Eukaryotes - 4304 (source: NCBI BLink). & (gnl|cdd|36788 : 255.0) no description available & (gnl|cdd|31011 : 219.0) no description available & (p40691|a115_tobac : 84.0) Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) & (reliability: 1156.0) & (original description: Putative alr2, Description = Aldo/keto reductase, PFAM = PF00248)' T '3.5' 'minor CHO metabolism.others' 'niben101scf00721_83499-89061' '(at4g23730 : 460.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G61610.1); Has 2244 Blast hits to 2241 proteins in 942 species: Archae - 0; Bacteria - 1605; Metazoa - 39; Fungi - 135; Plants - 255; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36807 : 454.0) no description available & (gnl|cdd|31020 : 203.0) no description available & (reliability: 920.0) & (original description: Putative BnaA03g46210D, Description = BnaA03g46210D protein, PFAM = PF01263)' T '3.5' 'minor CHO metabolism.others' 'niben101scf01050_67008-85282' '(at5g57330 : 502.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G61610.1); Has 1923 Blast hits to 1920 proteins in 763 species: Archae - 0; Bacteria - 1269; Metazoa - 39; Fungi - 135; Plants - 272; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink). & (gnl|cdd|36807 : 470.0) no description available & (gnl|cdd|31020 : 194.0) no description available & (reliability: 1004.0) & (original description: Putative At3g01590, Description = Putative glucose-6-phosphate 1-epimerase, PFAM = PF01263)' T '3.5' 'minor CHO metabolism.others' 'niben101scf01063_72080-160345' '(at4g27600 : 558.0) Encodes a phosphofructokinase B-type carbohydrate kinase family protein, NARA5. Regulates photosynthetic gene expression.; GENES NECESSARY FOR THE ACHIEVEMENT OF RUBISCO ACCUMULATION 5 (NARA5); CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT1G19600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29352 : 284.0) no description available & (gnl|cdd|38065 : 273.0) no description available & (reliability: 1116.0) & (original description: Putative NARA5, Description = AT4g27600/T29A15_90, PFAM = PF00294)' T '3.5' 'minor CHO metabolism.others' 'niben101scf01083_679582-697239' '(at3g61610 : 411.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, N-terminal protein myristoylation, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT4G23730.1); Has 2031 Blast hits to 2028 proteins in 827 species: Archae - 0; Bacteria - 1385; Metazoa - 39; Fungi - 135; Plants - 269; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink). & (gnl|cdd|36807 : 394.0) no description available & (gnl|cdd|31020 : 162.0) no description available & (reliability: 822.0) & (original description: Putative PGSC0003DMG400000089, Description = Putative glucose-6-phosphate 1-epimerase, PFAM = PF01263)' T '3.5' 'minor CHO metabolism.others' 'niben101scf01326_801160-830438' '(gnl|cdd|36817 : 378.0) no description available & (at3g47800 : 360.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: aldose 1-epimerase activity; INVOLVED IN: galactose metabolic process, hexose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Aldose 1-epimerase, subgroup (InterPro:IPR015443), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT5G15140.1); Has 4663 Blast hits to 4656 proteins in 1452 species: Archae - 5; Bacteria - 3197; Metazoa - 273; Fungi - 257; Plants - 219; Viruses - 0; Other Eukaryotes - 712 (source: NCBI BLink). & (gnl|cdd|85346 : 259.0) no description available & (reliability: 720.0) & (original description: Putative ncapp, Description = Aldose 1-epimerase, PFAM = PF01263)' T '3.5' 'minor CHO metabolism.others' 'niben101scf01326_834269-842142' '(at5g15140 : 373.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: aldose 1-epimerase activity; INVOLVED IN: galactose metabolic process, hexose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Aldose 1-epimerase, subgroup (InterPro:IPR015443), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G01260.1); Has 86054 Blast hits to 36023 proteins in 2379 species: Archae - 275; Bacteria - 25650; Metazoa - 19137; Fungi - 9557; Plants - 4507; Viruses - 809; Other Eukaryotes - 26119 (source: NCBI BLink). & (gnl|cdd|36817 : 370.0) no description available & (gnl|cdd|85346 : 249.0) no description available & (reliability: 746.0) & (original description: Putative aep1, Description = Aldose 1-epimerase, PFAM = PF01263)' T '3.5' 'minor CHO metabolism.others' 'niben101scf01326_843470-847260' '(gnl|cdd|36817 : 384.0) no description available & (at5g15140 : 379.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: aldose 1-epimerase activity; INVOLVED IN: galactose metabolic process, hexose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Aldose 1-epimerase, subgroup (InterPro:IPR015443), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G01260.1); Has 86054 Blast hits to 36023 proteins in 2379 species: Archae - 275; Bacteria - 25650; Metazoa - 19137; Fungi - 9557; Plants - 4507; Viruses - 809; Other Eukaryotes - 26119 (source: NCBI BLink). & (gnl|cdd|85346 : 259.0) no description available & (reliability: 758.0) & (original description: Putative aep1, Description = Aldose 1-epimerase, PFAM = PF01263)' T '3.5' 'minor CHO metabolism.others' 'niben101scf01500_673991-681544' '(at4g28706 : 437.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT5G43910.2). & (gnl|cdd|29367 : 248.0) no description available & (gnl|cdd|38066 : 81.9) no description available & (reliability: 874.0) & (original description: Putative At4g28706, Description = PfkB-like carbohydrate kinase family protein, PFAM = PF00294;PF00294)' T '3.5' 'minor CHO metabolism.others' 'niben101scf01694_281390-288700' '(at5g58730 : 387.0) pfkB-like carbohydrate kinase family protein; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT4G10260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38066 : 136.0) no description available & (gnl|cdd|30870 : 87.2) no description available & (reliability: 774.0) & (original description: Putative At5g58730, Description = Inositol 3-kinase, PFAM = PF00294)' T '3.5' 'minor CHO metabolism.others' 'niben101scf01817_212172-218800' '(at4g23730 : 432.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G61610.1); Has 2244 Blast hits to 2241 proteins in 942 species: Archae - 0; Bacteria - 1605; Metazoa - 39; Fungi - 135; Plants - 255; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36807 : 431.0) no description available & (gnl|cdd|31020 : 195.0) no description available & (reliability: 864.0) & (original description: Putative At3g01590, Description = Putative glucose-6-phosphate 1-epimerase, PFAM = PF01263)' T '3.5' 'minor CHO metabolism.others' 'niben101scf01953_142942-149620' '(at5g53580 : 567.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G06690.1); Has 29267 Blast hits to 29250 proteins in 2546 species: Archae - 568; Bacteria - 19101; Metazoa - 2030; Fungi - 2126; Plants - 1340; Viruses - 0; Other Eukaryotes - 4102 (source: NCBI BLink). & (gnl|cdd|36788 : 262.0) no description available & (gnl|cdd|31011 : 216.0) no description available & (reliability: 1134.0) & (original description: Putative PLR1, Description = Pyridoxal reductase, chloroplastic, PFAM = PF00248)' T '3.5' 'minor CHO metabolism.others' 'niben101scf01986_40940-49103' '(at5g11980 : 342.0) conserved oligomeric Golgi complex component-related / COG complex component-related; CONTAINS InterPro DOMAIN/s: Conserved oligomeric Golgi complex, subunit 8 (InterPro:IPR016632), Dor1-like protein (InterPro:IPR007255); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37280 : 244.0) no description available & (gnl|cdd|67729 : 235.0) no description available & (reliability: 684.0) & (original description: Putative cog8, Description = Conserved oligomeric Golgi complex subunit 8, PFAM = PF04124)' T '3.5' 'minor CHO metabolism.others' 'niben101scf01986_41319-49109' '(at5g11980 : 862.0) conserved oligomeric Golgi complex component-related / COG complex component-related; CONTAINS InterPro DOMAIN/s: Conserved oligomeric Golgi complex, subunit 8 (InterPro:IPR016632), Dor1-like protein (InterPro:IPR007255); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37280 : 543.0) no description available & (gnl|cdd|67729 : 378.0) no description available & (reliability: 1724.0) & (original description: Putative COG8, Description = Component of oligomeric golgi complex 8, PFAM = PF04124)' T '3.5' 'minor CHO metabolism.others' 'niben101scf02078_872250-878620' '(at3g13790 : 602.0) Encodes a protein with invertase activity.; ATBFRUCT1; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: beta-fructofuranosidase 5 (TAIR:AT1G55120.1). & (gnl|cdd|35449 : 597.0) no description available & (p26792|inv1_dauca : 540.0) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) - Daucus carota (Carrot) & (gnl|cdd|47917 : 374.0) no description available & (reliability: 1166.0) & (original description: Putative CWINV1, Description = Beta-fructofuranosidase, insoluble isoenzyme CWINV1, PFAM = PF00251;PF08244)' T '3.5' 'minor CHO metabolism.others' 'niben101scf02085_770727-776806' '(at2g37770 : 429.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G37790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36790 : 379.0) no description available & (gnl|cdd|84642 : 309.0) no description available & (p23901|aldr_horvu : 217.0) Aldose reductase (EC 1.1.1.21) (AR) (Aldehyde reductase) - Hordeum vulgare (Barley) & (reliability: 858.0) & (original description: Putative ar1, Description = Aldo-keto reductase family 4 member C9, PFAM = PF00248)' T '3.5' 'minor CHO metabolism.others' 'niben101scf02430_180359-187136' '(at5g01670 : 467.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G37770.2); Has 16960 Blast hits to 16922 proteins in 2239 species: Archae - 315; Bacteria - 10569; Metazoa - 1835; Fungi - 1554; Plants - 1108; Viruses - 0; Other Eukaryotes - 1579 (source: NCBI BLink). & (p23901|aldr_horvu : 459.0) Aldose reductase (EC 1.1.1.21) (AR) (Aldehyde reductase) - Hordeum vulgare (Barley) & (gnl|cdd|36790 : 314.0) no description available & (gnl|cdd|84642 : 271.0) no description available & (reliability: 934.0) & (original description: Putative alrA, Description = Aldo-keto reductase family 4 member C9, PFAM = PF00248)' T '3.5' 'minor CHO metabolism.others' 'niben101scf02459_960350-962734' '(at1g55120 : 110.0) Encodes a protein with fructan exohydrolase (FEH) activity acting on levan-type fructans (6-FEH, levanase). The enzyme does not have invertase activity.; beta-fructofuranosidase 5 (FRUCT5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, levanase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 32 protein (TAIR:AT3G13790.2). & (q56ud1|inv5_orysa : 94.4) Beta-fructofuranosidase, insoluble isoenzyme 5 (EC 3.2.1.26) (Sucrose hydrolase 5) (Invertase 5) (Cell wall beta-fructosidase 5) (OsCIN5) (Fragment) - Oryza sativa (Rice) & (gnl|cdd|35449 : 93.5) no description available & (reliability: 220.0) & (original description: Putative lin5, Description = Beta-fructofuranosidase, PFAM = PF08244)' T '3.5' 'minor CHO metabolism.others' 'niben101scf02502_1968952-1981182' '(at5g03770 : 512.0) Encodes a putative KDO (3-deoxy-D-manno-octulosonate) transferase; KDO transferase A (KDTA); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, carbohydrate metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal (InterPro:IPR007507); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|81724 : 326.0) no description available & (reliability: 1024.0) & (original description: Putative KDTA, Description = Probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial, PFAM = PF04413)' T '3.5' 'minor CHO metabolism.others' 'niben101scf03045_1349903-1354926' '(gnl|cdd|36807 : 369.0) no description available & (at5g14500 : 353.0) aldose 1-epimerase family protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G01590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31020 : 138.0) no description available & (reliability: 706.0) & (original description: Putative Ccrd_015971, Description = Aldose 1-/Glucose-6-phosphate 1-epimerase, PFAM = PF01263)' T '3.5' 'minor CHO metabolism.others' 'niben101scf03064_306395-345440' '(at1g04420 : 598.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: potassium channel beta subunit 1 (TAIR:AT1G04690.1); Has 28623 Blast hits to 28597 proteins in 2530 species: Archae - 619; Bacteria - 18927; Metazoa - 1497; Fungi - 1929; Plants - 977; Viruses - 0; Other Eukaryotes - 4674 (source: NCBI BLink). & (gnl|cdd|83360 : 306.0) no description available & (gnl|cdd|36788 : 267.0) no description available & (q40648|kcab_orysa : 115.0) Probable voltage-gated potassium channel subunit beta (K(+) channel subunit beta) - Oryza sativa (Rice) & (reliability: 1196.0) & (original description: Putative tas, Description = Aldo/keto reductase, PFAM = PF00248)' T '3.5' 'minor CHO metabolism.others' 'niben101scf03194_23190-26992' '(at3g47800 : 474.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: aldose 1-epimerase activity; INVOLVED IN: galactose metabolic process, hexose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Aldose 1-epimerase, subgroup (InterPro:IPR015443), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT5G15140.1); Has 4663 Blast hits to 4656 proteins in 1452 species: Archae - 5; Bacteria - 3197; Metazoa - 273; Fungi - 257; Plants - 219; Viruses - 0; Other Eukaryotes - 712 (source: NCBI BLink). & (gnl|cdd|36817 : 410.0) no description available & (gnl|cdd|83683 : 274.0) no description available & (reliability: 948.0) & (original description: Putative mro, Description = Aldose 1-epimerase, PFAM = PF01263)' T '3.5' 'minor CHO metabolism.others' 'niben101scf03263_698234-708959' '(at4g28706 : 505.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT5G43910.2). & (gnl|cdd|29367 : 267.0) no description available & (gnl|cdd|38158 : 88.8) no description available & (reliability: 1010.0) & (original description: Putative At4g28706, Description = PfkB-like carbohydrate kinase family protein, PFAM = PF00294;PF00294)' T '3.5' 'minor CHO metabolism.others' 'niben101scf03326_296580-509750' '(at4g27600 : 558.0) Encodes a phosphofructokinase B-type carbohydrate kinase family protein, NARA5. Regulates photosynthetic gene expression.; GENES NECESSARY FOR THE ACHIEVEMENT OF RUBISCO ACCUMULATION 5 (NARA5); CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT1G19600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29352 : 283.0) no description available & (gnl|cdd|38065 : 271.0) no description available & (reliability: 1116.0) & (original description: Putative NARA5, Description = AT4g27600/T29A15_90, PFAM = PF00294)' T '3.5' 'minor CHO metabolism.others' 'niben101scf03766_945680-951943' '(at5g14500 : 479.0) aldose 1-epimerase family protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G01590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36807 : 435.0) no description available & (gnl|cdd|31020 : 173.0) no description available & (reliability: 958.0) & (original description: Putative glysoja_041637, Description = Putative glucose-6-phosphate 1-epimerase, PFAM = PF01263)' T '3.5' 'minor CHO metabolism.others' 'niben101scf03948_107584-115679' '(at1g06730 : 530.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: D-ribose catabolic process; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT3G59480.1); Has 14630 Blast hits to 14623 proteins in 2218 species: Archae - 286; Bacteria - 12051; Metazoa - 104; Fungi - 33; Plants - 346; Viruses - 0; Other Eukaryotes - 1810 (source: NCBI BLink). & (gnl|cdd|38066 : 185.0) no description available & (gnl|cdd|30870 : 138.0) no description available & (reliability: 1060.0) & (original description: Putative At1g06730, Description = At1g06730/F4H5_22, PFAM = PF00294)' T '3.5' 'minor CHO metabolism.others' 'niben101scf04096_455011-457616' '(at5g52190 : 240.0) Sugar isomerase (SIS) family protein; FUNCTIONS IN: sugar binding; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar isomerase (SIS) (InterPro:IPR001347); Has 950 Blast hits to 950 proteins in 353 species: Archae - 153; Bacteria - 734; Metazoa - 0; Fungi - 2; Plants - 24; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|31137 : 98.4) no description available & (reliability: 480.0) & (original description: Putative hxlB, Description = 6-phospho-3-hexuloisomerase HxlB, PFAM = )' T '3.5' 'minor CHO metabolism.others' 'niben101scf04172_486945-503527' '(at4g28706 : 501.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT5G43910.2). & (gnl|cdd|29367 : 260.0) no description available & (gnl|cdd|38158 : 83.1) no description available & (reliability: 1002.0) & (original description: Putative glysoja_026483, Description = Ribokinase, PFAM = PF00294;PF00294)' T '3.5' 'minor CHO metabolism.others' 'niben101scf04741_390375-394929' '(at1g17160 : 462.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT1G06030.1); Has 20525 Blast hits to 20525 proteins in 2560 species: Archae - 370; Bacteria - 15982; Metazoa - 398; Fungi - 241; Plants - 483; Viruses - 0; Other Eukaryotes - 3051 (source: NCBI BLink). & (gnl|cdd|29358 : 299.0) no description available & (gnl|cdd|38066 : 249.0) no description available & (reliability: 924.0) & (original description: Putative RBSK, Description = Ribokinase, PFAM = PF00294)' T '3.5' 'minor CHO metabolism.others' 'niben101scf04989_245493-255994' '(at5g53850 : 788.0) haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: hydrolase activity, ion binding, methylthioribulose 1-phosphate dehydratase activity, metal ion binding; INVOLVED IN: L-methionine salvage; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class II aldolase/adducin, N-terminal (InterPro:IPR001303), Methylthioribulose-1-phosphate dehydratase (InterPro:IPR017714); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37842 : 306.0) no description available & (gnl|cdd|33954 : 213.0) no description available & (reliability: 1576.0) & (original description: Putative apip, Description = MTRu-1-P dehydratase, PFAM = PF00596)' T '3.5' 'minor CHO metabolism.others' 'niben101scf05645_333934-340481' '(at5g62420 : 428.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G37770.2); Has 21460 Blast hits to 21432 proteins in 2382 species: Archae - 393; Bacteria - 14564; Metazoa - 1753; Fungi - 1710; Plants - 1348; Viruses - 0; Other Eukaryotes - 1692 (source: NCBI BLink). & (gnl|cdd|36790 : 325.0) no description available & (gnl|cdd|84642 : 288.0) no description available & (q7g764|nado1_orysa : 263.0) Probable NAD(P)H-dependent oxidoreductase 1 (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 856.0) & (original description: Putative AKR4C9, Description = Aldo-keto reductase family 4 member C9, PFAM = PF00248)' T '3.5' 'minor CHO metabolism.others' 'niben101scf05736_158496-173404' '(at4g28706 : 481.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT5G43910.2). & (gnl|cdd|29367 : 267.0) no description available & (gnl|cdd|38158 : 89.6) no description available & (reliability: 962.0) & (original description: Putative glysoja_016503, Description = Ribokinase, PFAM = PF00294;PF00294)' T '3.5' 'minor CHO metabolism.others' 'niben101scf06171_234385-239854' '(at1g19600 : 491.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: D-ribose catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT4G27600.1); Has 11746 Blast hits to 11745 proteins in 2087 species: Archae - 257; Bacteria - 7533; Metazoa - 331; Fungi - 90; Plants - 444; Viruses - 0; Other Eukaryotes - 3091 (source: NCBI BLink). & (gnl|cdd|29352 : 259.0) no description available & (gnl|cdd|38065 : 230.0) no description available & (reliability: 982.0) & (original description: Putative 7H8, Description = Putative ribokinase, PFAM = PF00294)' T '3.5' 'minor CHO metabolism.others' 'niben101scf06172_230761-286551' '(at3g47800 : 338.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: aldose 1-epimerase activity; INVOLVED IN: galactose metabolic process, hexose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Aldose 1-epimerase, subgroup (InterPro:IPR015443), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT5G15140.1); Has 4663 Blast hits to 4656 proteins in 1452 species: Archae - 5; Bacteria - 3197; Metazoa - 273; Fungi - 257; Plants - 219; Viruses - 0; Other Eukaryotes - 712 (source: NCBI BLink). & (gnl|cdd|36817 : 334.0) no description available & (gnl|cdd|83683 : 247.0) no description available & (reliability: 676.0) & (original description: Putative ncapp, Description = Aldose 1-epimerase, PFAM = PF01263;PF01263)' T '3.5' 'minor CHO metabolism.others' 'niben101scf07247_517035-529695' '(at5g53850 : 768.0) haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: hydrolase activity, ion binding, methylthioribulose 1-phosphate dehydratase activity, metal ion binding; INVOLVED IN: L-methionine salvage; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class II aldolase/adducin, N-terminal (InterPro:IPR001303), Methylthioribulose-1-phosphate dehydratase (InterPro:IPR017714); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37842 : 313.0) no description available & (gnl|cdd|33954 : 215.0) no description available & (reliability: 1536.0) & (original description: Putative apip, Description = MTRu-1-P dehydratase, PFAM = PF00596)' T '3.5' 'minor CHO metabolism.others' 'niben101scf07663_44555-47160' '(at5g52190 : 243.0) Sugar isomerase (SIS) family protein; FUNCTIONS IN: sugar binding; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar isomerase (SIS) (InterPro:IPR001347); Has 950 Blast hits to 950 proteins in 353 species: Archae - 153; Bacteria - 734; Metazoa - 0; Fungi - 2; Plants - 24; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|31137 : 98.8) no description available & (reliability: 486.0) & (original description: Putative rmpB, Description = 3-hexulose-6-phosphate isomerase, PFAM = )' T '3.5' 'minor CHO metabolism.others' 'niben101scf08643_18186-24377' '(at2g27680 : 611.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G06690.1); Has 12729 Blast hits to 12722 proteins in 1987 species: Archae - 303; Bacteria - 10047; Metazoa - 110; Fungi - 525; Plants - 450; Viruses - 0; Other Eukaryotes - 1294 (source: NCBI BLink). & (gnl|cdd|36788 : 241.0) no description available & (gnl|cdd|84642 : 159.0) no description available & (reliability: 1222.0) & (original description: Putative DKGA, Description = 2,5-diketo-D-gluconic acid reductase A, PFAM = PF00248)' T '3.5' 'minor CHO metabolism.others' 'niben101scf08653_820167-824243' '(at3g17940 : 493.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, hexose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Aldose 1-epimerase, subgroup (InterPro:IPR015443), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G47800.1); Has 4707 Blast hits to 4700 proteins in 1470 species: Archae - 28; Bacteria - 3220; Metazoa - 276; Fungi - 257; Plants - 219; Viruses - 0; Other Eukaryotes - 707 (source: NCBI BLink). & (gnl|cdd|36817 : 415.0) no description available & (gnl|cdd|83683 : 267.0) no description available & (reliability: 986.0) & (original description: Putative mro, Description = Aldose 1-epimerase, PFAM = PF01263)' T '3.5' 'minor CHO metabolism.others' 'niben101scf08675_150541-154276' '(at3g17940 : 503.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, hexose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Aldose 1-epimerase, subgroup (InterPro:IPR015443), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G47800.1); Has 4707 Blast hits to 4700 proteins in 1470 species: Archae - 28; Bacteria - 3220; Metazoa - 276; Fungi - 257; Plants - 219; Viruses - 0; Other Eukaryotes - 707 (source: NCBI BLink). & (gnl|cdd|36817 : 415.0) no description available & (gnl|cdd|85346 : 264.0) no description available & (reliability: 1006.0) & (original description: Putative mro, Description = Aldose 1-epimerase, PFAM = PF01263)' T '3.5' 'minor CHO metabolism.others' 'niben101scf10202_16751-21863' '(at3g61610 : 492.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, N-terminal protein myristoylation, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT4G23730.1); Has 2031 Blast hits to 2028 proteins in 827 species: Archae - 0; Bacteria - 1385; Metazoa - 39; Fungi - 135; Plants - 269; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink). & (gnl|cdd|36807 : 445.0) no description available & (gnl|cdd|31020 : 181.0) no description available & (reliability: 984.0) & (original description: Putative At3g01590, Description = Putative glucose-6-phosphate 1-epimerase, PFAM = PF01263)' T '3.5' 'minor CHO metabolism.others' 'niben101scf10722_57175-65471' '(gnl|cdd|83360 : 289.0) no description available & (at1g04420 : 286.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: potassium channel beta subunit 1 (TAIR:AT1G04690.1); Has 28623 Blast hits to 28597 proteins in 2530 species: Archae - 619; Bacteria - 18927; Metazoa - 1497; Fungi - 1929; Plants - 977; Viruses - 0; Other Eukaryotes - 4674 (source: NCBI BLink). & (gnl|cdd|36788 : 229.0) no description available & (q40648|kcab_orysa : 120.0) Probable voltage-gated potassium channel subunit beta (K(+) channel subunit beta) - Oryza sativa (Rice) & (reliability: 572.0) & (original description: Putative tas, Description = Aldo/keto reductase, PFAM = PF00248)' T '3.5' 'minor CHO metabolism.others' 'niben101scf10919_108465-112894' '(at2g21250 : 539.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G21260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p28475|s6pd_maldo : 454.0) NADP-dependent D-sorbitol-6-phosphate dehydrogenase (EC 1.1.1.200) (Aldose-6-phosphate reductase [NADPH]) (NADP-S6PDH) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|36790 : 361.0) no description available & (gnl|cdd|84642 : 316.0) no description available & (reliability: 1078.0) & (original description: Putative m6pr, Description = NADPH-dependent mannose 6-phosphate reductase, PFAM = PF00248)' T '3.5' 'minor CHO metabolism.others' 'niben101scf16024_76866-86315' '(at5g57330 : 505.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G61610.1); Has 1923 Blast hits to 1920 proteins in 763 species: Archae - 0; Bacteria - 1269; Metazoa - 39; Fungi - 135; Plants - 272; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink). & (gnl|cdd|36807 : 472.0) no description available & (gnl|cdd|31020 : 197.0) no description available & (reliability: 1010.0) & (original description: Putative At3g01590, Description = Putative glucose-6-phosphate 1-epimerase, PFAM = PF01263)' T '3.5' 'minor CHO metabolism.others' 'niben101scf18745_157417-172038' '(at5g37850 : 509.0) Encodes a pyridoxal kinase required for root hair development. Mutants are hypersensitive to Na+, K+ and Li+.; SALT OVERLY SENSITIVE 4 (SOS4); FUNCTIONS IN: pyridoxal kinase activity, kinase activity; INVOLVED IN: pyridoxine biosynthetic process, hyperosmotic salinity response, trichoblast differentiation, pyridoxal 5'-phosphate salvage; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase (InterPro:IPR004625), Phosphomethylpyrimidine kinase type-1 (InterPro:IPR013749). & (gnl|cdd|37810 : 392.0) no description available & (gnl|cdd|29357 : 288.0) no description available & (reliability: 1018.0) & (original description: Putative PK, Description = Pyridoxal kinase, PFAM = PF08543)' T '3.5' 'minor CHO metabolism.others' 'niben101scf20773_194513-198975' '(at5g62420 : 426.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G37770.2); Has 21460 Blast hits to 21432 proteins in 2382 species: Archae - 393; Bacteria - 14564; Metazoa - 1753; Fungi - 1710; Plants - 1348; Viruses - 0; Other Eukaryotes - 1692 (source: NCBI BLink). & (gnl|cdd|36790 : 322.0) no description available & (gnl|cdd|84642 : 286.0) no description available & (q7g764|nado1_orysa : 274.0) Probable NAD(P)H-dependent oxidoreductase 1 (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 852.0) & (original description: Putative ar1, Description = Aldo-keto reductase family 4 member C9, PFAM = PF00248)' T '3.5' 'minor CHO metabolism.others' 'niben101scf21257_58135-66091' '(at1g49350 : 285.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); Has 2896 Blast hits to 2893 proteins in 1061 species: Archae - 1; Bacteria - 2475; Metazoa - 103; Fungi - 59; Plants - 64; Viruses - 0; Other Eukaryotes - 194 (source: NCBI BLink). & (gnl|cdd|29363 : 190.0) no description available & (gnl|cdd|38219 : 94.3) no description available & (reliability: 570.0) & (original description: Putative At1g49350, Description = PfkB-type carbohydrate kinase-like protein, PFAM = PF00294;PF00294)' T '3.5.1' 'minor CHO metabolism.others.Xylose isomerase' 'nbv0.3scaffold13986_706-7346' '(at5g57655 : 774.0) xylose isomerase family protein; FUNCTIONS IN: xylose isomerase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xylose isomerase-like, TIM barrel domain (InterPro:IPR013022), Xylose isomerase, bacterial type (InterPro:IPR013452), Xylose isomerase (InterPro:IPR001998), Xylose isomerase, TIM barrel domain (InterPro:IPR012307); Has 2515 Blast hits to 2515 proteins in 856 species: Archae - 2; Bacteria - 1880; Metazoa - 11; Fungi - 2; Plants - 82; Viruses - 0; Other Eukaryotes - 538 (source: NCBI BLink). & (q40082|xyla_horvu : 760.0) Xylose isomerase (EC 5.3.1.5) - Hordeum vulgare (Barley) & (gnl|cdd|81617 : 657.0) no description available & (reliability: 1548.0) & (original description: Putative XYLA, Description = Xylose isomerase, PFAM = )' T '3.5.1' 'minor CHO metabolism.others.Xylose isomerase' 'nbv0.5scaffold6244_75193-81602' '(at5g57655 : 711.0) xylose isomerase family protein; FUNCTIONS IN: xylose isomerase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xylose isomerase-like, TIM barrel domain (InterPro:IPR013022), Xylose isomerase, bacterial type (InterPro:IPR013452), Xylose isomerase (InterPro:IPR001998), Xylose isomerase, TIM barrel domain (InterPro:IPR012307); Has 2515 Blast hits to 2515 proteins in 856 species: Archae - 2; Bacteria - 1880; Metazoa - 11; Fungi - 2; Plants - 82; Viruses - 0; Other Eukaryotes - 538 (source: NCBI BLink). & (q40082|xyla_horvu : 698.0) Xylose isomerase (EC 5.3.1.5) - Hordeum vulgare (Barley) & (gnl|cdd|81617 : 602.0) no description available & (reliability: 1422.0) & (original description: Putative XYLA, Description = Xylose isomerase, PFAM = )' T '3.5.1' 'minor CHO metabolism.others.Xylose isomerase' 'niben101scf01907_85269-92519' '(at5g57655 : 776.0) xylose isomerase family protein; FUNCTIONS IN: xylose isomerase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xylose isomerase-like, TIM barrel domain (InterPro:IPR013022), Xylose isomerase, bacterial type (InterPro:IPR013452), Xylose isomerase (InterPro:IPR001998), Xylose isomerase, TIM barrel domain (InterPro:IPR012307); Has 2515 Blast hits to 2515 proteins in 856 species: Archae - 2; Bacteria - 1880; Metazoa - 11; Fungi - 2; Plants - 82; Viruses - 0; Other Eukaryotes - 538 (source: NCBI BLink). & (q40082|xyla_horvu : 765.0) Xylose isomerase (EC 5.3.1.5) - Hordeum vulgare (Barley) & (gnl|cdd|81617 : 657.0) no description available & (reliability: 1552.0) & (original description: Putative XYLA, Description = Xylose isomerase, PFAM = )' T '3.6' 'minor CHO metabolism.callose' 'nbv0.3scaffold16565_1-37535' '(at2g36850 : 2431.0) Encodes GSL8, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL8 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. Also refer to GSL10 (At3g07160).; glucan synthase-like 8 (GSL8); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: microsporogenesis, 1,3-beta-glucan biosynthetic process, pollen development, developmental growth; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 10 (TAIR:AT3G07160.1); Has 1219 Blast hits to 893 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 675; Plants - 477; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36134 : 1442.0) no description available & (gnl|cdd|66084 : 642.0) no description available & (reliability: 4862.0) & (original description: Putative BnaC05g44800D, Description = BnaC05g44800D protein, PFAM = PF02364;PF14288)' T '3.6' 'minor CHO metabolism.callose' 'nbv0.3scaffold23408_1-18677' '(at3g07160 : 1353.0) Encodes GSL10, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL10 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. GSL10 mutation leads to perturbation of microspore division symmetry, irregular callose deposition and failure of generative cell engulfment by the vegetative cell cytoplasm. Also refer to GSL8 (At2g36850).; glucan synthase-like 10 (GSL10); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: in 8 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 8 (TAIR:AT2G36850.1); Has 1244 Blast hits to 899 proteins in 149 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 674; Plants - 491; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|36134 : 1154.0) no description available & (gnl|cdd|66084 : 578.0) no description available & (reliability: 2706.0) & (original description: Putative BnaUnng02530D, Description = BnaUnng02530D protein, PFAM = PF02364)' T '3.6' 'minor CHO metabolism.callose' 'nbv0.3scaffold49869_203-15227' '(at3g07160 : 665.0) Encodes GSL10, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL10 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. GSL10 mutation leads to perturbation of microspore division symmetry, irregular callose deposition and failure of generative cell engulfment by the vegetative cell cytoplasm. Also refer to GSL8 (At2g36850).; glucan synthase-like 10 (GSL10); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: in 8 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 8 (TAIR:AT2G36850.1); Has 1244 Blast hits to 899 proteins in 149 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 674; Plants - 491; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|36134 : 261.0) no description available & (reliability: 1330.0) & (original description: Putative CFL1, Description = Callose synthase 10, PFAM = PF14288)' T '3.6' 'minor CHO metabolism.callose' 'nbv0.3scaffold70777_1-6443' '(at5g13000 : 1112.0) encodes a gene similar to callose synthase; glucan synthase-like 12 (GSL12); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: callose synthase 1 (TAIR:AT1G05570.1); Has 1373 Blast hits to 1031 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 71; Fungi - 677; Plants - 549; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|36134 : 932.0) no description available & (gnl|cdd|66084 : 494.0) no description available & (reliability: 2224.0) & (original description: Putative GSL2, Description = Callose synthase 5, PFAM = PF02364;PF02364)' T '3.6' 'minor CHO metabolism.callose' 'nbv0.3scaffold74534_1-7606' '(at3g07160 : 598.0) Encodes GSL10, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL10 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. GSL10 mutation leads to perturbation of microspore division symmetry, irregular callose deposition and failure of generative cell engulfment by the vegetative cell cytoplasm. Also refer to GSL8 (At2g36850).; glucan synthase-like 10 (GSL10); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: in 8 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 8 (TAIR:AT2G36850.1); Has 1244 Blast hits to 899 proteins in 149 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 674; Plants - 491; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|36134 : 295.0) no description available & (gnl|cdd|66084 : 85.7) no description available & (reliability: 1196.0) & (original description: Putative CALS, Description = Callose synthase, PFAM = PF02364)' T '3.6' 'minor CHO metabolism.callose' 'nbv0.3scaffold76570_1-5277' '(at2g36850 : 263.0) Encodes GSL8, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL8 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. Also refer to GSL10 (At3g07160).; glucan synthase-like 8 (GSL8); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: microsporogenesis, 1,3-beta-glucan biosynthetic process, pollen development, developmental growth; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 10 (TAIR:AT3G07160.1); Has 1219 Blast hits to 893 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 675; Plants - 477; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative CFL1, Description = Callose synthase 10, PFAM = )' T '3.6' 'minor CHO metabolism.callose' 'nbv0.3scaffold140812_1-1289' '(at4g03550 : 214.0) Encodes a callose synthase that is required for wound and papillary callose formation in response to fungal pathogens Erysiphe and Blumeria. Mutants are resistant to P. parasitica and exhibit an exaggerated PR1 response.Contributes to PAMP-induced basal defense.; glucan synthase-like 5 (GSL05); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: in 12 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 1 (TAIR:AT4G04970.1); Has 1221 Blast hits to 894 proteins in 155 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 695; Plants - 448; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|36134 : 120.0) no description available & (reliability: 428.0) & (original description: Putative GSL1, Description = Callose synthase 12, PFAM = )' T '3.6' 'minor CHO metabolism.callose' 'nbv0.5scaffold130_879953-906978' '(at5g13000 : 3159.0) encodes a gene similar to callose synthase; glucan synthase-like 12 (GSL12); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: callose synthase 1 (TAIR:AT1G05570.1); Has 1373 Blast hits to 1031 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 71; Fungi - 677; Plants - 549; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|36134 : 2030.0) no description available & (gnl|cdd|66084 : 405.0) no description available & (reliability: 6318.0) & (original description: Putative Sb04g038510, Description = Putative uncharacterized protein Sb04g038510, PFAM = PF02364;PF02364;PF04652;PF14288)' T '3.6' 'minor CHO metabolism.callose' 'nbv0.5scaffold130_985551-988193' '(at3g07160 : 177.0) Encodes GSL10, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL10 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. GSL10 mutation leads to perturbation of microspore division symmetry, irregular callose deposition and failure of generative cell engulfment by the vegetative cell cytoplasm. Also refer to GSL8 (At2g36850).; glucan synthase-like 10 (GSL10); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: in 8 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 8 (TAIR:AT2G36850.1); Has 1244 Blast hits to 899 proteins in 149 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 674; Plants - 491; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|36134 : 115.0) no description available & (reliability: 354.0) & (original description: Putative cs, Description = Callose synthase 9, PFAM = PF02364)' T '3.6' 'minor CHO metabolism.callose' 'nbv0.5scaffold1281_161439-189826' '(at1g05570 : 3130.0) Encodes a callose synthase 1 catalytic subunit . Member of Glycosyltransferase Family- 48.; callose synthase 1 (CALS1); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: glucan synthase-like 3 (TAIR:AT2G31960.2). & (gnl|cdd|36134 : 2129.0) no description available & (gnl|cdd|66084 : 663.0) no description available & (reliability: 6260.0) & (original description: Putative CALS1, Description = Callose synthase 1, PFAM = PF02364;PF02364;PF04652;PF14288)' T '3.6' 'minor CHO metabolism.callose' 'niben044scf00002518ctg002_1-10058' '(at3g07160 : 778.0) Encodes GSL10, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL10 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. GSL10 mutation leads to perturbation of microspore division symmetry, irregular callose deposition and failure of generative cell engulfment by the vegetative cell cytoplasm. Also refer to GSL8 (At2g36850).; glucan synthase-like 10 (GSL10); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: in 8 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 8 (TAIR:AT2G36850.1); Has 1244 Blast hits to 899 proteins in 149 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 674; Plants - 491; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|36134 : 755.0) no description available & (gnl|cdd|66084 : 484.0) no description available & (reliability: 1556.0) & (original description: Putative CFL1, Description = Callose synthase 5, PFAM = PF02364)' T '3.6' 'minor CHO metabolism.callose' 'niben044scf00005931ctg006_7784-21001' '(at2g36850 : 1133.0) Encodes GSL8, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL8 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. Also refer to GSL10 (At3g07160).; glucan synthase-like 8 (GSL8); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: microsporogenesis, 1,3-beta-glucan biosynthetic process, pollen development, developmental growth; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 10 (TAIR:AT3G07160.1); Has 1219 Blast hits to 893 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 675; Plants - 477; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36134 : 1023.0) no description available & (gnl|cdd|66084 : 515.0) no description available & (reliability: 2266.0) & (original description: Putative BnaUnng02530D, Description = BnaUnng02530D protein, PFAM = PF02364)' T '3.6' 'minor CHO metabolism.callose' 'niben044scf00005931ctg007_1-12883' '(at2g36850 : 638.0) Encodes GSL8, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL8 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. Also refer to GSL10 (At3g07160).; glucan synthase-like 8 (GSL8); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: microsporogenesis, 1,3-beta-glucan biosynthetic process, pollen development, developmental growth; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 10 (TAIR:AT3G07160.1); Has 1219 Blast hits to 893 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 675; Plants - 477; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36134 : 304.0) no description available & (gnl|cdd|66084 : 95.4) no description available & (reliability: 1276.0) & (original description: Putative CALS, Description = Callose synthase, PFAM = PF02364;PF02364)' T '3.6' 'minor CHO metabolism.callose' 'niben044scf00012880ctg003_1628-7484' '(at3g07160 : 233.0) Encodes GSL10, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL10 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. GSL10 mutation leads to perturbation of microspore division symmetry, irregular callose deposition and failure of generative cell engulfment by the vegetative cell cytoplasm. Also refer to GSL8 (At2g36850).; glucan synthase-like 10 (GSL10); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: in 8 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 8 (TAIR:AT2G36850.1); Has 1244 Blast hits to 899 proteins in 149 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 674; Plants - 491; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|36134 : 80.4) no description available & (reliability: 466.0) & (original description: Putative CFL1, Description = Callose synthase 9, PFAM = )' T '3.6' 'minor CHO metabolism.callose' 'niben044scf00012880ctg005_1-15246' '(at5g13000 : 2824.0) encodes a gene similar to callose synthase; glucan synthase-like 12 (GSL12); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: callose synthase 1 (TAIR:AT1G05570.1); Has 1373 Blast hits to 1031 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 71; Fungi - 677; Plants - 549; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|36134 : 1892.0) no description available & (gnl|cdd|66084 : 651.0) no description available & (reliability: 5648.0) & (original description: Putative CALS3, Description = Callose synthase 3, PFAM = PF14288;PF02364)' T '3.6' 'minor CHO metabolism.callose' 'niben044scf00013988ctg005_1-14455' '(at2g36850 : 348.0) Encodes GSL8, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL8 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. Also refer to GSL10 (At3g07160).; glucan synthase-like 8 (GSL8); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: microsporogenesis, 1,3-beta-glucan biosynthetic process, pollen development, developmental growth; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 10 (TAIR:AT3G07160.1); Has 1219 Blast hits to 893 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 675; Plants - 477; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (reliability: 696.0) & (original description: Putative CFL1, Description = Callose synthase 10, PFAM = )' T '3.6' 'minor CHO metabolism.callose' 'niben044scf00019844ctg012_6233-13648' '(at3g07160 : 704.0) Encodes GSL10, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL10 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. GSL10 mutation leads to perturbation of microspore division symmetry, irregular callose deposition and failure of generative cell engulfment by the vegetative cell cytoplasm. Also refer to GSL8 (At2g36850).; glucan synthase-like 10 (GSL10); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: in 8 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 8 (TAIR:AT2G36850.1); Has 1244 Blast hits to 899 proteins in 149 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 674; Plants - 491; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|36134 : 608.0) no description available & (gnl|cdd|66084 : 305.0) no description available & (reliability: 1408.0) & (original description: Putative CFL1, Description = 1,3-beta-glucan synthase, PFAM = PF02364)' T '3.6' 'minor CHO metabolism.callose' 'niben101scf02725_264045-290401' '(at3g14570 : 2745.0) encodes a protein similar to callose synthase; glucan synthase-like 4 (GSL04); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 12 (TAIR:AT5G13000.1). & (gnl|cdd|36134 : 1497.0) no description available & (gnl|cdd|66084 : 637.0) no description available & (reliability: 5490.0) & (original description: Putative CALS8, Description = Putative callose synthase 8, PFAM = PF02364;PF04652;PF14288)' T '3.6' 'minor CHO metabolism.callose' 'niben101scf02853_111307-178466' '(at2g36850 : 3070.0) Encodes GSL8, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL8 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. Also refer to GSL10 (At3g07160).; glucan synthase-like 8 (GSL8); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: microsporogenesis, 1,3-beta-glucan biosynthetic process, pollen development, developmental growth; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 10 (TAIR:AT3G07160.1); Has 1219 Blast hits to 893 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 675; Plants - 477; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36134 : 1742.0) no description available & (gnl|cdd|66084 : 666.0) no description available & (reliability: 6140.0) & (original description: Putative CALS10, Description = Callose synthase 10, PFAM = PF14288;PF02364;PF02364)' T '3.6' 'minor CHO metabolism.callose' 'niben101scf04144_187604-211988' '(at1g06490 : 2803.0) encodes a gene similar to callose synthase; glucan synthase-like 7 (GSL07); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 11 (TAIR:AT3G59100.1); Has 1279 Blast hits to 924 proteins in 155 species: Archae - 0; Bacteria - 2; Metazoa - 9; Fungi - 711; Plants - 489; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|36134 : 1984.0) no description available & (gnl|cdd|66084 : 664.0) no description available & (reliability: 5606.0) & (original description: Putative CALS7, Description = Callose synthase 7, PFAM = PF04652;PF14288;PF02364;PF02364)' T '3.6' 'minor CHO metabolism.callose' 'niben101scf05107_131254-198229' '(at3g07160 : 2825.0) Encodes GSL10, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL10 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. GSL10 mutation leads to perturbation of microspore division symmetry, irregular callose deposition and failure of generative cell engulfment by the vegetative cell cytoplasm. Also refer to GSL8 (At2g36850).; glucan synthase-like 10 (GSL10); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: in 8 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 8 (TAIR:AT2G36850.1); Has 1244 Blast hits to 899 proteins in 149 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 674; Plants - 491; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|36134 : 1756.0) no description available & (gnl|cdd|66084 : 667.0) no description available & (reliability: 5650.0) & (original description: Putative CALS9, Description = Callose synthase 9, PFAM = PF14288;PF02364)' T '3.6' 'minor CHO metabolism.callose' 'niben101scf05107_132087-142654' '(at3g07160 : 681.0) Encodes GSL10, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL10 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. GSL10 mutation leads to perturbation of microspore division symmetry, irregular callose deposition and failure of generative cell engulfment by the vegetative cell cytoplasm. Also refer to GSL8 (At2g36850).; glucan synthase-like 10 (GSL10); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: in 8 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 8 (TAIR:AT2G36850.1); Has 1244 Blast hits to 899 proteins in 149 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 674; Plants - 491; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|36134 : 613.0) no description available & (gnl|cdd|66084 : 307.0) no description available & (reliability: 1362.0) & (original description: Putative CalS13, Description = Callose synthase, PFAM = PF02364)' T '3.6' 'minor CHO metabolism.callose' 'niben101scf05107_248848-268238' '(at5g13000 : 1850.0) encodes a gene similar to callose synthase; glucan synthase-like 12 (GSL12); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: callose synthase 1 (TAIR:AT1G05570.1); Has 1373 Blast hits to 1031 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 71; Fungi - 677; Plants - 549; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|36134 : 1502.0) no description available & (gnl|cdd|66084 : 646.0) no description available & (reliability: 3700.0) & (original description: Putative Sb10g005550, Description = Putative uncharacterized protein Sb10g005550, PFAM = PF02364)' T '3.6' 'minor CHO metabolism.callose' 'niben101scf05107_271862-400193' '(at5g13000 : 591.0) encodes a gene similar to callose synthase; glucan synthase-like 12 (GSL12); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: callose synthase 1 (TAIR:AT1G05570.1); Has 1373 Blast hits to 1031 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 71; Fungi - 677; Plants - 549; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|36134 : 346.0) no description available & (reliability: 1182.0) & (original description: Putative GSL2, Description = Callose synthase 5, PFAM = PF14288;PF04652)' T '3.6' 'minor CHO metabolism.callose' 'niben101scf06208_53714-61181' '(at4g03550 : 2609.0) Encodes a callose synthase that is required for wound and papillary callose formation in response to fungal pathogens Erysiphe and Blumeria. Mutants are resistant to P. parasitica and exhibit an exaggerated PR1 response.Contributes to PAMP-induced basal defense.; glucan synthase-like 5 (GSL05); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: in 12 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 1 (TAIR:AT4G04970.1); Has 1221 Blast hits to 894 proteins in 155 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 695; Plants - 448; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|36134 : 1739.0) no description available & (gnl|cdd|66084 : 867.0) no description available & (reliability: 5218.0) & (original description: Putative CALS12, Description = Callose synthase 12, PFAM = PF02364;PF14288)' T '3.6' 'minor CHO metabolism.callose' 'niben101scf08446_317367-324676' '(at4g04970 : 2399.0) encodes a gene similar to callose synthase; glucan synthase-like 1 (GSL1); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: reproduction, 1,3-beta-glucan biosynthetic process, pollen development; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 5 (TAIR:AT4G03550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36134 : 1712.0) no description available & (gnl|cdd|66084 : 804.0) no description available & (reliability: 4798.0) & (original description: Putative CALS11, Description = Callose synthase 11, PFAM = PF02364;PF14288)' T '3.6' 'minor CHO metabolism.callose' 'niben101scf09955_72580-91144' '(at2g13680 : 3164.0) Responsible for the synthesis of callose deposited at the primary cell wall of meiocytes, tetrads and microspores. Required for exine formation during microgametogenesis and for pollen viability. Highest expression in meiocytes, tetrads, microspores and mature pollen.; callose synthase 5 (CALS5); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: in 6 processes; LOCATED IN: 1,3-beta-glucan synthase complex, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: glucan synthase-like 12 (TAIR:AT5G13000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36134 : 2016.0) no description available & (gnl|cdd|66084 : 683.0) no description available & (reliability: 6328.0) & (original description: Putative CALS5, Description = Callose synthase 5, PFAM = PF04652;PF14288;PF02364)' T '3.6' 'minor CHO metabolism.callose' 'niben101scf11608_181859-206875' '(at5g13000 : 3173.0) encodes a gene similar to callose synthase; glucan synthase-like 12 (GSL12); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: callose synthase 1 (TAIR:AT1G05570.1); Has 1373 Blast hits to 1031 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 71; Fungi - 677; Plants - 549; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|36134 : 2038.0) no description available & (gnl|cdd|66084 : 405.0) no description available & (reliability: 6346.0) & (original description: Putative CALS3, Description = Callose synthase 3, PFAM = PF14288;PF04652;PF02364;PF02364)' T '3.6' 'minor CHO metabolism.callose' 'niben101scf11922_44555-76946' '(at1g05570 : 3139.0) Encodes a callose synthase 1 catalytic subunit . Member of Glycosyltransferase Family- 48.; callose synthase 1 (CALS1); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: glucan synthase-like 3 (TAIR:AT2G31960.2). & (gnl|cdd|36134 : 2152.0) no description available & (gnl|cdd|66084 : 665.0) no description available & (reliability: 6278.0) & (original description: Putative CALS1, Description = Callose synthase 1, PFAM = PF14288;PF02364;PF04652)' T '3.7' 'minor CHO metabolism.sugar kinases' 'niben101scf02564_1241581-1248521' '(at5g49650 : 838.0) Encodes a cytosolic protein capable of phosphorylating xylulose and deoxy-xylulose. It most likely plays a role in producing precursors for isoprenoid biosynthesis.; xylulose kinase-2 (XK-2); FUNCTIONS IN: xylulokinase activity; INVOLVED IN: xylulose metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37742 : 717.0) no description available & (gnl|cdd|31268 : 206.0) no description available & (reliability: 1676.0) & (original description: Putative XYLB, Description = Xylulose kinase, PFAM = PF02782;PF00370)' T '3.7' 'minor CHO metabolism.sugar kinases' 'niben101scf02564_1438875-1445419' '(at5g49650 : 857.0) Encodes a cytosolic protein capable of phosphorylating xylulose and deoxy-xylulose. It most likely plays a role in producing precursors for isoprenoid biosynthesis.; xylulose kinase-2 (XK-2); FUNCTIONS IN: xylulokinase activity; INVOLVED IN: xylulose metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37742 : 694.0) no description available & (gnl|cdd|31268 : 199.0) no description available & (reliability: 1714.0) & (original description: Putative Xylb, Description = Xylulose kinase, PFAM = PF00370;PF02782)' T '3.7' 'minor CHO metabolism.sugar kinases' 'niben101scf12293_365416-371634' '(at2g21370 : 635.0) Although this gene has a sequence similar to xylulose kinases, several lines of experimental evidence suggest that it does not act on xylulose or deoxy-xylulose.; xylulose kinase-1 (XK-1); FUNCTIONS IN: xylulokinase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast, plastid, cytoplasm; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|31268 : 217.0) no description available & (reliability: 1270.0) & (original description: Putative xylB, Description = Xylulose kinase, PFAM = PF02782;PF00370)' T '3.8' 'minor CHO metabolism.galactose' '' '' '3.8.1' 'minor CHO metabolism.galactose.galactokinases' 'nbv0.5scaffold52_112317-142131' '(at4g16130 : 1406.0) Similar to galactokinase.; arabinose kinase (ARA1); FUNCTIONS IN: L-arabinokinase activity, ATP binding, galactokinase activity; INVOLVED IN: arabinose metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Galactokinase, glycosyltransferase (InterPro:IPR012369), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Mevalonate/galactokinase family protein (TAIR:AT3G42850.1); Has 3503 Blast hits to 3497 proteins in 1405 species: Archae - 74; Bacteria - 2553; Metazoa - 183; Fungi - 124; Plants - 132; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|35850 : 381.0) no description available & (gnl|cdd|30502 : 116.0) no description available & (reliability: 2706.0) & (original description: Putative BnaC08g24480D, Description = BnaC08g24480D protein, PFAM = PF10509;PF13528;PF00288)' T '3.8.1' 'minor CHO metabolism.galactose.galactokinases' 'nbv0.5scaffold82_15511-617401' '(at4g16130 : 457.0) Similar to galactokinase.; arabinose kinase (ARA1); FUNCTIONS IN: L-arabinokinase activity, ATP binding, galactokinase activity; INVOLVED IN: arabinose metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Galactokinase, glycosyltransferase (InterPro:IPR012369), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Mevalonate/galactokinase family protein (TAIR:AT3G42850.1); Has 3503 Blast hits to 3497 proteins in 1405 species: Archae - 74; Bacteria - 2553; Metazoa - 183; Fungi - 124; Plants - 132; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (reliability: 860.0) & (original description: Putative BnaC08g24480D, Description = BnaC08g24480D protein, PFAM = PF08544)' T '3.8.1' 'minor CHO metabolism.galactose.galactokinases' 'niben044scf00023719ctg001_17798-25532' '(at4g16130 : 374.0) Similar to galactokinase.; arabinose kinase (ARA1); FUNCTIONS IN: L-arabinokinase activity, ATP binding, galactokinase activity; INVOLVED IN: arabinose metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Galactokinase, glycosyltransferase (InterPro:IPR012369), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Mevalonate/galactokinase family protein (TAIR:AT3G42850.1); Has 3503 Blast hits to 3497 proteins in 1405 species: Archae - 74; Bacteria - 2553; Metazoa - 183; Fungi - 124; Plants - 132; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|35850 : 130.0) no description available & (reliability: 696.0) & (original description: Putative ARA, Description = L-arabinokinase, PFAM = PF13528)' T '3.8.1' 'minor CHO metabolism.galactose.galactokinases' 'niben044scf00043991ctg000_166-5723' '(at4g16130 : 620.0) Similar to galactokinase.; arabinose kinase (ARA1); FUNCTIONS IN: L-arabinokinase activity, ATP binding, galactokinase activity; INVOLVED IN: arabinose metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Galactokinase, glycosyltransferase (InterPro:IPR012369), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Mevalonate/galactokinase family protein (TAIR:AT3G42850.1); Has 3503 Blast hits to 3497 proteins in 1405 species: Archae - 74; Bacteria - 2553; Metazoa - 183; Fungi - 124; Plants - 132; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|30502 : 116.0) no description available & (reliability: 1196.0) & (original description: Putative BnaC08g24480D, Description = BnaC08g24480D protein, PFAM = PF08544;PF00288)' T '3.8.1' 'minor CHO metabolism.galactose.galactokinases' 'niben101scf03070_784193-792468' '(at3g06580 : 758.0) Encodes a protein with galactose kinase activity. The gene was shown to complement the yeast Æ’gal1 mutant defective in the galactokinase gene GAL1.; GALK; FUNCTIONS IN: ATP binding, galactokinase activity; INVOLVED IN: galactose metabolic process, carbohydrate phosphorylation; LOCATED IN: cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GHMP kinase, ATP-binding, conserved site (InterPro:IPR006203), GHMP kinase (InterPro:IPR006204), Galactokinase (InterPro:IPR000705), Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Galactokinase, conserved site (InterPro:IPR019741), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: arabinose kinase (TAIR:AT4G16130.1); Has 4768 Blast hits to 4465 proteins in 1570 species: Archae - 210; Bacteria - 3137; Metazoa - 280; Fungi - 182; Plants - 144; Viruses - 0; Other Eukaryotes - 815 (source: NCBI BLink). & (gnl|cdd|35850 : 441.0) no description available & (gnl|cdd|30502 : 255.0) no description available & (reliability: 1516.0) & (original description: Putative GAL1, Description = Galactokinase, PFAM = PF08544;PF10509;PF00288)' T '3.8.1' 'minor CHO metabolism.galactose.galactokinases' 'niben101scf03540_33750-66975' '(at4g16130 : 1434.0) Similar to galactokinase.; arabinose kinase (ARA1); FUNCTIONS IN: L-arabinokinase activity, ATP binding, galactokinase activity; INVOLVED IN: arabinose metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Galactokinase, glycosyltransferase (InterPro:IPR012369), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Mevalonate/galactokinase family protein (TAIR:AT3G42850.1); Has 3503 Blast hits to 3497 proteins in 1405 species: Archae - 74; Bacteria - 2553; Metazoa - 183; Fungi - 124; Plants - 132; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|35850 : 383.0) no description available & (gnl|cdd|30502 : 116.0) no description available & (reliability: 2758.0) & (original description: Putative ARA1, Description = L-arabinokinase, PFAM = PF13528;PF00288;PF10509)' T '3.8.1' 'minor CHO metabolism.galactose.galactokinases' 'niben101scf09703_41484-50883' '(at3g06580 : 767.0) Encodes a protein with galactose kinase activity. The gene was shown to complement the yeast Æ’gal1 mutant defective in the galactokinase gene GAL1.; GALK; FUNCTIONS IN: ATP binding, galactokinase activity; INVOLVED IN: galactose metabolic process, carbohydrate phosphorylation; LOCATED IN: cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GHMP kinase, ATP-binding, conserved site (InterPro:IPR006203), GHMP kinase (InterPro:IPR006204), Galactokinase (InterPro:IPR000705), Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Galactokinase, conserved site (InterPro:IPR019741), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: arabinose kinase (TAIR:AT4G16130.1); Has 4768 Blast hits to 4465 proteins in 1570 species: Archae - 210; Bacteria - 3137; Metazoa - 280; Fungi - 182; Plants - 144; Viruses - 0; Other Eukaryotes - 815 (source: NCBI BLink). & (gnl|cdd|35850 : 439.0) no description available & (gnl|cdd|30502 : 259.0) no description available & (reliability: 1534.0) & (original description: Putative GAL1, Description = Galactokinase, PFAM = PF08544;PF00288;PF10509)' T '3.8.2' 'minor CHO metabolism.galactose.alpha-galactosidases' 'nbv0.3scaffold41435_3067-7433' '(at5g08380 : 320.0) alpha-galactosidase 1 (AGAL1); FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process, metabolic process, lactose catabolic process; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 27 (InterPro:IPR002241), Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, clan GH-D (InterPro:IPR000111), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-galactosidase 2 (TAIR:AT5G08370.1); Has 1677 Blast hits to 1666 proteins in 372 species: Archae - 6; Bacteria - 673; Metazoa - 331; Fungi - 272; Plants - 227; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (gnl|cdd|37577 : 246.0) no description available & (q9fxt4|agal_orysa : 244.0) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D-galactoside galactohydrolase) - Oryza sativa (Rice) & (reliability: 640.0) & (original description: Putative agaA, Description = Alpha-galactosidase, PFAM = PF17450;PF16499)' T '3.8.2' 'minor CHO metabolism.galactose.alpha-galactosidases' 'niben044scf00003269ctg005_3656-9177' '(at5g08380 : 358.0) alpha-galactosidase 1 (AGAL1); FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process, metabolic process, lactose catabolic process; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 27 (InterPro:IPR002241), Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, clan GH-D (InterPro:IPR000111), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-galactosidase 2 (TAIR:AT5G08370.1); Has 1677 Blast hits to 1666 proteins in 372 species: Archae - 6; Bacteria - 673; Metazoa - 331; Fungi - 272; Plants - 227; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (q9fxt4|agal_orysa : 286.0) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D-galactoside galactohydrolase) - Oryza sativa (Rice) & (gnl|cdd|37577 : 278.0) no description available & (gnl|cdd|65817 : 89.2) no description available & (reliability: 716.0) & (original description: Putative gal1, Description = Alpha-galactosidase, PFAM = PF16499)' T '3.8.2' 'minor CHO metabolism.galactose.alpha-galactosidases' 'niben101scf00338_861720-869426' '(at5g08370 : 573.0) alpha-galactosidase 2 (AGAL2); FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: positive regulation of flower development, leaf morphogenesis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, family 27 (InterPro:IPR002241), Glycoside hydrolase, clan GH-D (InterPro:IPR000111), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-galactosidase 1 (TAIR:AT5G08380.1); Has 1586 Blast hits to 1573 proteins in 339 species: Archae - 4; Bacteria - 587; Metazoa - 332; Fungi - 271; Plants - 223; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (q9fxt4|agal_orysa : 548.0) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D-galactoside galactohydrolase) - Oryza sativa (Rice) & (gnl|cdd|37577 : 470.0) no description available & (gnl|cdd|65817 : 108.0) no description available & (reliability: 1146.0) & (original description: Putative agaA, Description = Alpha-galactosidase, PFAM = PF16499;PF17450)' T '3.8.2' 'minor CHO metabolism.galactose.alpha-galactosidases' 'niben101scf02913_141599-154280' '(at5g08380 : 605.0) alpha-galactosidase 1 (AGAL1); FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process, metabolic process, lactose catabolic process; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 27 (InterPro:IPR002241), Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, clan GH-D (InterPro:IPR000111), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-galactosidase 2 (TAIR:AT5G08370.1); Has 1677 Blast hits to 1666 proteins in 372 species: Archae - 6; Bacteria - 673; Metazoa - 331; Fungi - 272; Plants - 227; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (q9fxt4|agal_orysa : 473.0) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D-galactoside galactohydrolase) - Oryza sativa (Rice) & (gnl|cdd|37577 : 460.0) no description available & (gnl|cdd|65817 : 89.6) no description available & (reliability: 1210.0) & (original description: Putative agaA, Description = Alpha-galactosidase, PFAM = PF17450;PF16499)' T '3.8.2' 'minor CHO metabolism.galactose.alpha-galactosidases' 'niben101scf06825_326845-336526' '(at5g08370 : 573.0) alpha-galactosidase 2 (AGAL2); FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: positive regulation of flower development, leaf morphogenesis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, family 27 (InterPro:IPR002241), Glycoside hydrolase, clan GH-D (InterPro:IPR000111), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-galactosidase 1 (TAIR:AT5G08380.1); Has 1586 Blast hits to 1573 proteins in 339 species: Archae - 4; Bacteria - 587; Metazoa - 332; Fungi - 271; Plants - 223; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (q9fxt4|agal_orysa : 547.0) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D-galactoside galactohydrolase) - Oryza sativa (Rice) & (gnl|cdd|37577 : 469.0) no description available & (gnl|cdd|65817 : 106.0) no description available & (reliability: 1146.0) & (original description: Putative agaA, Description = Alpha-galactosidase, PFAM = PF16499;PF17450)' T '3.8.2' 'minor CHO metabolism.galactose.alpha-galactosidases' 'niben101scf07590_766535-776008' '(at3g26380 : 729.0) Melibiase family protein; FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: N-terminal protein myristoylation, carbohydrate metabolic process, metabolic process, lactose catabolic process; LOCATED IN: cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 27 (InterPro:IPR002241), Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Melibiase family protein (TAIR:AT3G56310.1); Has 1323 Blast hits to 1316 proteins in 313 species: Archae - 2; Bacteria - 513; Metazoa - 306; Fungi - 224; Plants - 205; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|37577 : 183.0) no description available & (reliability: 1458.0) & (original description: Putative At3g26380, Description = Alpha-galactosidase, PFAM = PF16499)' T '3.8.2' 'minor CHO metabolism.galactose.alpha-galactosidases' 'niben101scf09101_259155-266741' '(at3g56310 : 656.0) Melibiase family protein; FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process, metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, family 27 (InterPro:IPR002241), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-galactosidase 2 (TAIR:AT5G08370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37577 : 487.0) no description available & (q9fxt4|agal_orysa : 478.0) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D-galactoside galactohydrolase) - Oryza sativa (Rice) & (gnl|cdd|65817 : 100.0) no description available & (reliability: 1312.0) & (original description: Putative AGAL3, Description = Alpha-galactosidase 3, PFAM = PF16499)' T '3.8.2' 'minor CHO metabolism.galactose.alpha-galactosidases' 'niben101scf09101_263535-266678' '(at3g56310 : 117.0) Melibiase family protein; FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process, metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, family 27 (InterPro:IPR002241), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-galactosidase 2 (TAIR:AT5G08370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9fxt4|agal_orysa : 85.5) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D-galactoside galactohydrolase) - Oryza sativa (Rice) & (reliability: 234.0) & (original description: Putative gal1, Description = Alpha-galactosidase, PFAM = PF16499)' T '3.8.2' 'minor CHO metabolism.galactose.alpha-galactosidases' 'niben101scf09401_46050-56822' '(at3g56310 : 652.0) Melibiase family protein; FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process, metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, family 27 (InterPro:IPR002241), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-galactosidase 2 (TAIR:AT5G08370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37577 : 488.0) no description available & (q9fxt4|agal_orysa : 480.0) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D-galactoside galactohydrolase) - Oryza sativa (Rice) & (gnl|cdd|65817 : 101.0) no description available & (reliability: 1304.0) & (original description: Putative agaA, Description = Alpha-galactosidase, PFAM = PF16499)' T '3.8.2' 'minor CHO metabolism.galactose.alpha-galactosidases' 'niben101scf12011_158062-166255' '(at5g08380 : 651.0) alpha-galactosidase 1 (AGAL1); FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process, metabolic process, lactose catabolic process; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 27 (InterPro:IPR002241), Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, clan GH-D (InterPro:IPR000111), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-galactosidase 2 (TAIR:AT5G08370.1); Has 1677 Blast hits to 1666 proteins in 372 species: Archae - 6; Bacteria - 673; Metazoa - 331; Fungi - 272; Plants - 227; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (gnl|cdd|37577 : 492.0) no description available & (q9fxt4|agal_orysa : 488.0) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D-galactoside galactohydrolase) - Oryza sativa (Rice) & (gnl|cdd|65817 : 98.8) no description available & (reliability: 1302.0) & (original description: Putative gal1, Description = Alpha-galactosidase, PFAM = PF17450;PF16499)' T '3.8.3' 'minor CHO metabolism.galactose.galactose-1-phosphate uridyl transferases' '' '' '3.99' 'minor CHO metabolism.misc' 'niben044scf00001361ctg005_36749-45221' '(at5g36700 : 401.0) 2-phosphoglycolate phosphatase 1 (PGLP1); FUNCTIONS IN: phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIA (InterPro:IPR006357), 2-phosphoglycolate phosphatase, eukaryotic (InterPro:IPR006349); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G36790.3). & (gnl|cdd|38093 : 334.0) no description available & (gnl|cdd|30992 : 204.0) no description available & (reliability: 802.0) & (original description: Putative PGLP1A, Description = Phosphoglycolate phosphatase 1A, chloroplastic, PFAM = PF13242;PF13344)' T '3.99' 'minor CHO metabolism.misc' 'niben101scf08947_105531-117042' '(at5g36700 : 493.0) 2-phosphoglycolate phosphatase 1 (PGLP1); FUNCTIONS IN: phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIA (InterPro:IPR006357), 2-phosphoglycolate phosphatase, eukaryotic (InterPro:IPR006349); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G36790.3). & (gnl|cdd|38093 : 391.0) no description available & (gnl|cdd|30992 : 226.0) no description available & (reliability: 986.0) & (original description: Putative PGLP1A, Description = Phosphoglycolate phosphatase 1A, chloroplastic, PFAM = PF13344;PF13242)' T '3.99' 'minor CHO metabolism.misc' 'niben101scf11126_855389-863617' '(at5g36700 : 489.0) 2-phosphoglycolate phosphatase 1 (PGLP1); FUNCTIONS IN: phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIA (InterPro:IPR006357), 2-phosphoglycolate phosphatase, eukaryotic (InterPro:IPR006349); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G36790.3). & (gnl|cdd|38093 : 392.0) no description available & (gnl|cdd|30992 : 226.0) no description available & (reliability: 978.0) & (original description: Putative PGP, Description = Phosphoglycolate phosphatase, PFAM = PF13242;PF13344)' T '3.99.1001' 'minor CHO metabolism.misc' '1-o-methyl-alpha-galactoside' 'minor CHO metabolism.misc' M '3.99.1002' 'minor CHO metabolism.misc' '1-o-methyl-beta-galactoside' 'minor CHO metabolism.misc' M '3.99.1003' 'minor CHO metabolism.misc' '2-deoxyglucose' 'minor CHO metabolism.misc' M '3.99.1004' 'minor CHO metabolism.misc' '3-deoxyglucose' 'minor CHO metabolism.misc' M '3.99.1005' 'minor CHO metabolism.misc' '3-o-methylglucose' 'minor CHO metabolism.misc' M '3.99.1006' 'minor CHO metabolism.misc' 'beta-gentiobiose' 'minor CHO metabolism.misc' M '3.99.1007' 'minor CHO metabolism.misc' 'erythrose' 'minor CHO metabolism.misc' M '3.99.1008' 'minor CHO metabolism.misc' 'lactose' 'minor CHO metabolism.misc' M '3.99.1009' 'minor CHO metabolism.misc' 'lyxose' 'minor CHO metabolism.misc' M '3.99.1010' 'minor CHO metabolism.misc' 'melezitose' 'minor CHO metabolism.misc' M '3.99.1011' 'minor CHO metabolism.misc' 'methyl-alpha-mannopyranoside' 'minor CHO metabolism.misc' M '3.99.1012' 'minor CHO metabolism.misc' 'methyl-d-glucoside' 'minor CHO metabolism.misc' M '3.99.1013' 'minor CHO metabolism.misc' 'oligofructan (total)' 'minor CHO metabolism.misc' M '3.99.1014' 'minor CHO metabolism.misc' 'psicose' 'minor CHO metabolism.misc' M '3.99.1015' 'minor CHO metabolism.misc' 'sophorose' 'minor CHO metabolism.misc' M '3.99.1016' 'minor CHO metabolism.misc' 'sorbitol-6-p' 'minor CHO metabolism.misc' M '3.99.1017' 'minor CHO metabolism.misc' 'tagatose' 'minor CHO metabolism.misc' M '3.99.1018' 'minor CHO metabolism.misc' 'xylitol' 'minor CHO metabolism.misc' M '3.99.1019' 'minor CHO metabolism.misc' 'xylose' 'minor CHO metabolism.misc' M '3.99.1020' 'minor CHO metabolism.misc' 'galactonate' 'minor CHO metabolism.misc; galactose metabolism' M '3.99.1021' 'minor CHO metabolism.misc' 'galactose' 'minor CHO metabolism.misc; galactose metabolism; cell wall degradation' M '3.99.1022' 'minor CHO metabolism.misc' 'galactose-6-p' 'minor CHO metabolism.misc; galactose metabolism' M '3.99.1023' 'minor CHO metabolism.misc' 'stachyose' 'minor CHO metabolism.misc; galactose metabolism' M '3.99.1024' 'minor CHO metabolism.misc' 'erythronic acid' '' M '3.99.1025' 'minor CHO metabolism.misc' 'gulose' '' M '3.99.1026' 'minor CHO metabolism.misc' 'sorbose' '' M '3.99.1027' 'minor CHO metabolism.misc.Laminaribiose' 'laminaribiose' 'laminarabiose' M '4' 'glycolysis' '' '' '4.1' 'glycolysis.cytosolic branch' '' '' '4.1.1' 'glycolysis.cytosolic branch.UGPase' 'niben044scf00020510ctg008_1552-9723' '(p19595|ugpa_soltu : 823.0) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) - Solanum tuberosum (Potato) & (at5g17310 : 716.0) UDP-glucose pyrophosphorylase 2 (UGP2); FUNCTIONS IN: UTP:glucose-1-phosphate uridylyltransferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, callose deposition in cell wall, response to salt stress, metabolic process, pollen development; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase, subgroup (InterPro:IPR016267), UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: UDP-GLUCOSE PYROPHOSPHORYLASE 1 (TAIR:AT3G03250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37849 : 663.0) no description available & (gnl|cdd|85624 : 582.0) no description available & (reliability: 1432.0) & (original description: Putative fuy1, Description = UTP-glucose-1-phosphate uridylyltransferase, PFAM = PF01704)' T '4.1.1' 'glycolysis.cytosolic branch.UGPase' 'niben044scf00040499ctg000_7515-18864' '(q43772|ugpa_horvu : 331.0) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) - Hordeum vulgare (Barley) & (at3g03250 : 309.0) Is thought to encode a cytosolic UDP-glucose pyrophosphorylase with strong similarity to potato UTP--glucose-1-phosphate uridylyltransferase. Downregulated by flooding.; UDP-GLUCOSE PYROPHOSPHORYLASE 1 (UGP1); FUNCTIONS IN: UTP:glucose-1-phosphate uridylyltransferase activity, nucleotidyltransferase activity; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase, subgroup (InterPro:IPR016267), UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: UDP-glucose pyrophosphorylase 2 (TAIR:AT5G17310.2); Has 1425 Blast hits to 1421 proteins in 430 species: Archae - 0; Bacteria - 404; Metazoa - 339; Fungi - 309; Plants - 217; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (gnl|cdd|37849 : 291.0) no description available & (gnl|cdd|85624 : 257.0) no description available & (reliability: 618.0) & (original description: Putative UGPA, Description = UTP--glucose-1-phosphate uridylyltransferase, PFAM = PF01704;PF01704;PF00318;PF00318)' T '4.1.1' 'glycolysis.cytosolic branch.UGPase' 'niben101scf01556_177307-190341' '(p19595|ugpa_soltu : 842.0) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) - Solanum tuberosum (Potato) & (at5g17310 : 740.0) UDP-glucose pyrophosphorylase 2 (UGP2); FUNCTIONS IN: UTP:glucose-1-phosphate uridylyltransferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, callose deposition in cell wall, response to salt stress, metabolic process, pollen development; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase, subgroup (InterPro:IPR016267), UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: UDP-GLUCOSE PYROPHOSPHORYLASE 1 (TAIR:AT3G03250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37849 : 675.0) no description available & (gnl|cdd|85624 : 580.0) no description available & (reliability: 1480.0) & (original description: Putative fuy1, Description = UTP-glucose-1-phosphate uridylyltransferase, PFAM = PF01704)' T '4.1.1' 'glycolysis.cytosolic branch.UGPase' 'niben101scf01958_482974-491658' '(p19595|ugpa_soltu : 829.0) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) - Solanum tuberosum (Potato) & (at5g17310 : 738.0) UDP-glucose pyrophosphorylase 2 (UGP2); FUNCTIONS IN: UTP:glucose-1-phosphate uridylyltransferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, callose deposition in cell wall, response to salt stress, metabolic process, pollen development; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase, subgroup (InterPro:IPR016267), UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: UDP-GLUCOSE PYROPHOSPHORYLASE 1 (TAIR:AT3G03250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37849 : 673.0) no description available & (gnl|cdd|85624 : 583.0) no description available & (reliability: 1476.0) & (original description: Putative UGPA, Description = UTP--glucose-1-phosphate uridylyltransferase, PFAM = PF01704)' T '4.1.1' 'glycolysis.cytosolic branch.UGPase' 'niben101scf03873_240356-251147' '(p19595|ugpa_soltu : 336.0) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) - Solanum tuberosum (Potato) & (at3g03250 : 313.0) Is thought to encode a cytosolic UDP-glucose pyrophosphorylase with strong similarity to potato UTP--glucose-1-phosphate uridylyltransferase. Downregulated by flooding.; UDP-GLUCOSE PYROPHOSPHORYLASE 1 (UGP1); FUNCTIONS IN: UTP:glucose-1-phosphate uridylyltransferase activity, nucleotidyltransferase activity; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase, subgroup (InterPro:IPR016267), UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: UDP-glucose pyrophosphorylase 2 (TAIR:AT5G17310.2); Has 1425 Blast hits to 1421 proteins in 430 species: Archae - 0; Bacteria - 404; Metazoa - 339; Fungi - 309; Plants - 217; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (gnl|cdd|37849 : 296.0) no description available & (gnl|cdd|85624 : 266.0) no description available & (reliability: 626.0) & (original description: Putative UGPA, Description = UTP--glucose-1-phosphate uridylyltransferase, PFAM = PF01704;PF01704;PF00318;PF00318)' T '4.1.2' 'glycolysis.cytosolic branch.phosphoglucomutase (PGM)' 'nbv0.3scaffold3632_33869-58392' '(q9m4g4|pgmc_soltu : 1011.0) Phosphoglucomutase, cytoplasmic (EC 5.4.2.2) (Glucose phosphomutase) (PGM) - Solanum tuberosum (Potato) & (at1g70730 : 936.0) Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type, loss of both PGM2 and PGM3 severely impairs male and female gametophyte development.; Phosphoglucomutase/phosphomannomutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, magnesium ion binding, phosphoglucomutase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G23190.1); Has 6668 Blast hits to 6655 proteins in 2105 species: Archae - 91; Bacteria - 4924; Metazoa - 519; Fungi - 202; Plants - 162; Viruses - 0; Other Eukaryotes - 770 (source: NCBI BLink). & (gnl|cdd|35844 : 834.0) no description available & (gnl|cdd|82275 : 454.0) no description available & (reliability: 1872.0) & (original description: Putative pgm, Description = Phosphoglucomutase, PFAM = PF02878;PF02879;PF00408;PF02880)' T '4.1.2' 'glycolysis.cytosolic branch.phosphoglucomutase (PGM)' 'nbv0.5scaffold1185_389564-426642' '(q9m4g4|pgmc_soltu : 1013.0) Phosphoglucomutase, cytoplasmic (EC 5.4.2.2) (Glucose phosphomutase) (PGM) - Solanum tuberosum (Potato) & (at1g70730 : 936.0) Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type, loss of both PGM2 and PGM3 severely impairs male and female gametophyte development.; Phosphoglucomutase/phosphomannomutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, magnesium ion binding, phosphoglucomutase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G23190.1); Has 6668 Blast hits to 6655 proteins in 2105 species: Archae - 91; Bacteria - 4924; Metazoa - 519; Fungi - 202; Plants - 162; Viruses - 0; Other Eukaryotes - 770 (source: NCBI BLink). & (gnl|cdd|35844 : 840.0) no description available & (gnl|cdd|82275 : 457.0) no description available & (reliability: 1872.0) & (original description: Putative pgm1, Description = Phosphoglucomutase, PFAM = PF02878;PF02880;PF02879;PF00408)' T '4.1.2' 'glycolysis.cytosolic branch.phosphoglucomutase (PGM)' 'niben044scf00003659ctg016_1-3680' '(q9m4g4|pgmc_soltu : 220.0) Phosphoglucomutase, cytoplasmic (EC 5.4.2.2) (Glucose phosphomutase) (PGM) - Solanum tuberosum (Potato) & (at1g70730 : 202.0) Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type, loss of both PGM2 and PGM3 severely impairs male and female gametophyte development.; Phosphoglucomutase/phosphomannomutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, magnesium ion binding, phosphoglucomutase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G23190.1); Has 6668 Blast hits to 6655 proteins in 2105 species: Archae - 91; Bacteria - 4924; Metazoa - 519; Fungi - 202; Plants - 162; Viruses - 0; Other Eukaryotes - 770 (source: NCBI BLink). & (gnl|cdd|35844 : 176.0) no description available & (gnl|cdd|82275 : 104.0) no description available & (reliability: 404.0) & (original description: Putative NtCPGM, Description = Cytosolic phosphoglucomutase, PFAM = PF02878)' T '4.1.2' 'glycolysis.cytosolic branch.phosphoglucomutase (PGM)' 'niben101scf01697_2465592-2482641' '(q9m4g4|pgmc_soltu : 1107.0) Phosphoglucomutase, cytoplasmic (EC 5.4.2.2) (Glucose phosphomutase) (PGM) - Solanum tuberosum (Potato) & (at1g70730 : 988.0) Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type, loss of both PGM2 and PGM3 severely impairs male and female gametophyte development.; Phosphoglucomutase/phosphomannomutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, magnesium ion binding, phosphoglucomutase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G23190.1); Has 6668 Blast hits to 6655 proteins in 2105 species: Archae - 91; Bacteria - 4924; Metazoa - 519; Fungi - 202; Plants - 162; Viruses - 0; Other Eukaryotes - 770 (source: NCBI BLink). & (gnl|cdd|35844 : 873.0) no description available & (gnl|cdd|30382 : 476.0) no description available & (reliability: 1976.0) & (original description: Putative PGM1, Description = Phosphoglucomutase, cytoplasmic, PFAM = PF02879;PF00408;PF02880;PF02878)' T '4.1.2' 'glycolysis.cytosolic branch.phosphoglucomutase (PGM)' 'niben101scf02665_914999-966356' '(q9m4g4|pgmc_soltu : 1050.0) Phosphoglucomutase, cytoplasmic (EC 5.4.2.2) (Glucose phosphomutase) (PGM) - Solanum tuberosum (Potato) & (at1g70730 : 973.0) Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type, loss of both PGM2 and PGM3 severely impairs male and female gametophyte development.; Phosphoglucomutase/phosphomannomutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, magnesium ion binding, phosphoglucomutase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G23190.1); Has 6668 Blast hits to 6655 proteins in 2105 species: Archae - 91; Bacteria - 4924; Metazoa - 519; Fungi - 202; Plants - 162; Viruses - 0; Other Eukaryotes - 770 (source: NCBI BLink). & (gnl|cdd|35844 : 862.0) no description available & (gnl|cdd|82275 : 469.0) no description available & (reliability: 1946.0) & (original description: Putative PGM1, Description = Phosphoglucomutase, cytoplasmic, PFAM = PF02879;PF02878;PF00408;PF02880)' T '4.1.2' 'glycolysis.cytosolic branch.phosphoglucomutase (PGM)' 'niben101scf05822_767952-775146' '(q9m4g4|pgmc_soltu : 617.0) Phosphoglucomutase, cytoplasmic (EC 5.4.2.2) (Glucose phosphomutase) (PGM) - Solanum tuberosum (Potato) & (at1g70730 : 556.0) Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type, loss of both PGM2 and PGM3 severely impairs male and female gametophyte development.; Phosphoglucomutase/phosphomannomutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, magnesium ion binding, phosphoglucomutase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G23190.1); Has 6668 Blast hits to 6655 proteins in 2105 species: Archae - 91; Bacteria - 4924; Metazoa - 519; Fungi - 202; Plants - 162; Viruses - 0; Other Eukaryotes - 770 (source: NCBI BLink). & (gnl|cdd|35844 : 487.0) no description available & (gnl|cdd|30382 : 278.0) no description available & (reliability: 1112.0) & (original description: Putative pgm, Description = Phosphoglucomutase, PFAM = PF02878;PF02879)' T '4.1.3' 'glycolysis.cytosolic branch.glucose-6-phosphate isomerase' 'niben101scf02939_259892-286386' '(at5g42740 : 982.0) Sugar isomerase (SIS) family protein; FUNCTIONS IN: glucose-6-phosphate isomerase activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to cadmium ion, gluconeogenesis, glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglucose isomerase, conserved site (InterPro:IPR018189), Phosphoglucose isomerase (PGI) (InterPro:IPR001672); BEST Arabidopsis thaliana protein match is: phosphoglucose isomerase 1 (TAIR:AT4G24620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o82059|g6pi_spiol : 958.0) Glucose-6-phosphate isomerase, cytosolic (EC 5.3.1.9) (GPI) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) - Spinacia oleracea (Spinach) & (gnl|cdd|37657 : 717.0) no description available & (gnl|cdd|84705 : 708.0) no description available & (reliability: 1964.0) & (original description: Putative pgi, Description = Glucose-6-phosphate isomerase, PFAM = PF00342)' T '4.1.3' 'glycolysis.cytosolic branch.glucose-6-phosphate isomerase' 'niben101scf14005_20684-42963' '(at5g42740 : 979.0) Sugar isomerase (SIS) family protein; FUNCTIONS IN: glucose-6-phosphate isomerase activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to cadmium ion, gluconeogenesis, glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglucose isomerase, conserved site (InterPro:IPR018189), Phosphoglucose isomerase (PGI) (InterPro:IPR001672); BEST Arabidopsis thaliana protein match is: phosphoglucose isomerase 1 (TAIR:AT4G24620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o82059|g6pi_spiol : 961.0) Glucose-6-phosphate isomerase, cytosolic (EC 5.3.1.9) (GPI) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) - Spinacia oleracea (Spinach) & (gnl|cdd|37657 : 712.0) no description available & (gnl|cdd|84705 : 709.0) no description available & (reliability: 1958.0) & (original description: Putative pgi, Description = Glucose-6-phosphate isomerase, PFAM = PF00342)' T '4.1.4' 'glycolysis.cytosolic branch.phosphofructokinase (PFK)' 'nbv0.3scaffold64791_1579-10332' '(at5g61580 : 441.0) phosphofructokinase 4 (PFK4); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 3 (TAIR:AT4G26270.1); Has 7879 Blast hits to 7460 proteins in 2153 species: Archae - 28; Bacteria - 5246; Metazoa - 634; Fungi - 293; Plants - 391; Viruses - 4; Other Eukaryotes - 1283 (source: NCBI BLink). & (gnl|cdd|82016 : 277.0) no description available & (gnl|cdd|37651 : 270.0) no description available & (reliability: 800.0) & (original description: Putative 6PFK, Description = ATP-PFK, PFAM = PF00365)' T '4.1.4' 'glycolysis.cytosolic branch.phosphofructokinase (PFK)' 'nbv0.5scaffold9558_4534-9778' '(at4g26270 : 389.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82016 : 287.0) no description available & (gnl|cdd|37651 : 277.0) no description available & (reliability: 778.0) & (original description: Putative PFK, Description = Phosphofructokinase, PFAM = PF00365)' T '4.1.4' 'glycolysis.cytosolic branch.phosphofructokinase (PFK)' 'nbv0.5scaffold9558_5031-15050' '(at4g26270 : 765.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 501.0) no description available & (gnl|cdd|82016 : 485.0) no description available & (reliability: 1530.0) & (original description: Putative PFK3, Description = ATP-dependent 6-phosphofructokinase 3, PFAM = PF00365)' T '4.1.4' 'glycolysis.cytosolic branch.phosphofructokinase (PFK)' 'niben044scf00003407ctg004_1-4846' '(at4g26270 : 194.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 124.0) no description available & (gnl|cdd|82016 : 104.0) no description available & (reliability: 388.0) & (original description: Putative PFK, Description = ATP-PFK, PFAM = )' T '4.1.4' 'glycolysis.cytosolic branch.phosphofructokinase (PFK)' 'niben044scf00003407ctg005_1-6951' '(at4g26270 : 559.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82016 : 377.0) no description available & (gnl|cdd|37651 : 340.0) no description available & (reliability: 1118.0) & (original description: Putative 6PFK, Description = 6-phosphofructokinase, PFAM = PF00365)' T '4.1.4' 'glycolysis.cytosolic branch.phosphofructokinase (PFK)' 'niben101scf01153_23974-30831' '(at4g26270 : 784.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82016 : 487.0) no description available & (gnl|cdd|37651 : 482.0) no description available & (reliability: 1568.0) & (original description: Putative PFK3, Description = ATP-dependent 6-phosphofructokinase 3, PFAM = PF00365)' T '4.1.4' 'glycolysis.cytosolic branch.phosphofructokinase (PFK)' 'niben101scf01235_136231-146313' '(at4g26270 : 727.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 470.0) no description available & (gnl|cdd|82016 : 455.0) no description available & (reliability: 1454.0) & (original description: Putative PFK, Description = ATP-dependent 6-phosphofructokinase, PFAM = PF00365)' T '4.1.4' 'glycolysis.cytosolic branch.phosphofructokinase (PFK)' 'niben101scf02217_336449-350038' '(at4g26270 : 387.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82016 : 284.0) no description available & (gnl|cdd|37651 : 276.0) no description available & (reliability: 774.0) & (original description: Putative PFK, Description = Phosphofructokinase, PFAM = PF00365)' T '4.1.4' 'glycolysis.cytosolic branch.phosphofructokinase (PFK)' 'niben101scf02217_336568-359429' '(at4g26270 : 758.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 498.0) no description available & (gnl|cdd|82016 : 481.0) no description available & (reliability: 1516.0) & (original description: Putative PFK3, Description = ATP-dependent 6-phosphofructokinase 3, PFAM = PF00365)' T '4.1.4' 'glycolysis.cytosolic branch.phosphofructokinase (PFK)' 'niben101scf06698_32044-51234' '(at4g26270 : 754.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 493.0) no description available & (gnl|cdd|82016 : 486.0) no description available & (reliability: 1508.0) & (original description: Putative PFK3, Description = ATP-dependent 6-phosphofructokinase 3, PFAM = PF00365)' T '4.1.4' 'glycolysis.cytosolic branch.phosphofructokinase (PFK)' 'niben101scf17612_201075-206529' '(at5g47810 : 681.0) phosphofructokinase 2 (PFK2); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 3 (TAIR:AT4G26270.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|82016 : 459.0) no description available & (gnl|cdd|37651 : 398.0) no description available & (reliability: 1362.0) & (original description: Putative PFK2, Description = ATP-dependent 6-phosphofructokinase 2, PFAM = PF00365)' T '4.1.5' 'glycolysis.cytosolic branch.pyrophosphate-fructose-6-P phosphotransferase' 'nbv0.3scaffold1570_46716-65514' '(q41141|pfpb_ricco : 831.0) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) - Ricinus communis (Castor bean) & (at1g12000 : 799.0) Phosphofructokinase family protein; FUNCTIONS IN: diphosphate-fructose-6-phosphate 1-phosphotransferase activity; INVOLVED IN: response to cadmium ion, glycolysis, photosynthesis; LOCATED IN: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex, cell wall, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT4G04040.1); Has 6357 Blast hits to 6276 proteins in 1942 species: Archae - 28; Bacteria - 4805; Metazoa - 61; Fungi - 134; Plants - 409; Viruses - 4; Other Eukaryotes - 916 (source: NCBI BLink). & (gnl|cdd|29440 : 739.0) no description available & (gnl|cdd|37651 : 401.0) no description available & (reliability: 1598.0) & (original description: Putative pfk, Description = 6-phosphofructokinase, pyrophosphate dependent, PFAM = PF00365)' T '4.1.5' 'glycolysis.cytosolic branch.pyrophosphate-fructose-6-P phosphotransferase' 'niben044scf00003448ctg020_1-11366' '(p21343|pfpb_soltu : 996.0) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) - Solanum tuberosum (Potato) & (at1g12000 : 855.0) Phosphofructokinase family protein; FUNCTIONS IN: diphosphate-fructose-6-phosphate 1-phosphotransferase activity; INVOLVED IN: response to cadmium ion, glycolysis, photosynthesis; LOCATED IN: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex, cell wall, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT4G04040.1); Has 6357 Blast hits to 6276 proteins in 1942 species: Archae - 28; Bacteria - 4805; Metazoa - 61; Fungi - 134; Plants - 409; Viruses - 4; Other Eukaryotes - 916 (source: NCBI BLink). & (gnl|cdd|29440 : 803.0) no description available & (gnl|cdd|37651 : 440.0) no description available & (reliability: 1710.0) & (original description: Putative pfk, Description = 6-phosphofructokinase, pyrophosphate dependent, PFAM = PF00365)' T '4.1.5' 'glycolysis.cytosolic branch.pyrophosphate-fructose-6-P phosphotransferase' 'niben044scf00006944ctg009_24787-33903' '(p21343|pfpb_soltu : 1004.0) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) - Solanum tuberosum (Potato) & (at1g12000 : 860.0) Phosphofructokinase family protein; FUNCTIONS IN: diphosphate-fructose-6-phosphate 1-phosphotransferase activity; INVOLVED IN: response to cadmium ion, glycolysis, photosynthesis; LOCATED IN: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex, cell wall, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT4G04040.1); Has 6357 Blast hits to 6276 proteins in 1942 species: Archae - 28; Bacteria - 4805; Metazoa - 61; Fungi - 134; Plants - 409; Viruses - 4; Other Eukaryotes - 916 (source: NCBI BLink). & (gnl|cdd|29440 : 808.0) no description available & (gnl|cdd|37651 : 444.0) no description available & (reliability: 1720.0) & (original description: Putative pfk, Description = 6-phosphofructokinase, pyrophosphate dependent, PFAM = PF00365)' T '4.1.5' 'glycolysis.cytosolic branch.pyrophosphate-fructose-6-P phosphotransferase' 'niben101scf02145_62239-73870' '(p21343|pfpb_soltu : 1025.0) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) - Solanum tuberosum (Potato) & (at1g12000 : 883.0) Phosphofructokinase family protein; FUNCTIONS IN: diphosphate-fructose-6-phosphate 1-phosphotransferase activity; INVOLVED IN: response to cadmium ion, glycolysis, photosynthesis; LOCATED IN: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex, cell wall, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT4G04040.1); Has 6357 Blast hits to 6276 proteins in 1942 species: Archae - 28; Bacteria - 4805; Metazoa - 61; Fungi - 134; Plants - 409; Viruses - 4; Other Eukaryotes - 916 (source: NCBI BLink). & (gnl|cdd|29440 : 829.0) no description available & (gnl|cdd|37651 : 459.0) no description available & (reliability: 1766.0) & (original description: Putative pfk, Description = 6-phosphofructokinase, pyrophosphate dependent, PFAM = PF00365)' T '4.1.5' 'glycolysis.cytosolic branch.pyrophosphate-fructose-6-P phosphotransferase' 'niben101scf02953_65288-74282' '(p21343|pfpb_soltu : 1033.0) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) - Solanum tuberosum (Potato) & (at1g12000 : 887.0) Phosphofructokinase family protein; FUNCTIONS IN: diphosphate-fructose-6-phosphate 1-phosphotransferase activity; INVOLVED IN: response to cadmium ion, glycolysis, photosynthesis; LOCATED IN: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex, cell wall, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT4G04040.1); Has 6357 Blast hits to 6276 proteins in 1942 species: Archae - 28; Bacteria - 4805; Metazoa - 61; Fungi - 134; Plants - 409; Viruses - 4; Other Eukaryotes - 916 (source: NCBI BLink). & (gnl|cdd|29440 : 833.0) no description available & (gnl|cdd|37651 : 462.0) no description available & (reliability: 1774.0) & (original description: Putative pfk, Description = 6-phosphofructokinase, pyrophosphate dependent, PFAM = PF00365)' T '4.1.5' 'glycolysis.cytosolic branch.pyrophosphate-fructose-6-P phosphotransferase' 'niben101scf02968_185356-205188' '(q41141|pfpb_ricco : 926.0) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) - Ricinus communis (Castor bean) & (at1g12000 : 901.0) Phosphofructokinase family protein; FUNCTIONS IN: diphosphate-fructose-6-phosphate 1-phosphotransferase activity; INVOLVED IN: response to cadmium ion, glycolysis, photosynthesis; LOCATED IN: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex, cell wall, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT4G04040.1); Has 6357 Blast hits to 6276 proteins in 1942 species: Archae - 28; Bacteria - 4805; Metazoa - 61; Fungi - 134; Plants - 409; Viruses - 4; Other Eukaryotes - 916 (source: NCBI BLink). & (gnl|cdd|29440 : 833.0) no description available & (gnl|cdd|37651 : 450.0) no description available & (reliability: 1802.0) & (original description: Putative pfk, Description = 6-phosphofructokinase, pyrophosphate dependent, PFAM = PF00365)' T '4.1.5' 'glycolysis.cytosolic branch.pyrophosphate-fructose-6-P phosphotransferase' 'niben101scf05047_403863-413505' '(p21342|pfpa_soltu : 1116.0) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase alpha subunit (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) - Solanum tuberosum (Potato) & (at1g76550 : 1043.0) Phosphofructokinase family protein; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT1G20950.1); Has 4956 Blast hits to 4876 proteins in 1678 species: Archae - 20; Bacteria - 3823; Metazoa - 10; Fungi - 6; Plants - 430; Viruses - 0; Other Eukaryotes - 667 (source: NCBI BLink). & (gnl|cdd|75922 : 550.0) no description available & (gnl|cdd|37651 : 528.0) no description available & (reliability: 2086.0) & (original description: Putative PFPA4, Description = Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, PFAM = PF00365)' T '4.1.5' 'glycolysis.cytosolic branch.pyrophosphate-fructose-6-P phosphotransferase' 'niben101scf05226_773924-791379' '(p21342|pfpa_soltu : 1117.0) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase alpha subunit (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) - Solanum tuberosum (Potato) & (at1g76550 : 1049.0) Phosphofructokinase family protein; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT1G20950.1); Has 4956 Blast hits to 4876 proteins in 1678 species: Archae - 20; Bacteria - 3823; Metazoa - 10; Fungi - 6; Plants - 430; Viruses - 0; Other Eukaryotes - 667 (source: NCBI BLink). & (gnl|cdd|75922 : 553.0) no description available & (gnl|cdd|37651 : 534.0) no description available & (reliability: 2098.0) & (original description: Putative pfk, Description = 6-phosphofructokinase, pyrophosphate dependent, PFAM = PF00365)' T '4.1.5' 'glycolysis.cytosolic branch.pyrophosphate-fructose-6-P phosphotransferase' 'niben101scf24096_76292-84952' '(p21342|pfpa_soltu : 1176.0) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase alpha subunit (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) - Solanum tuberosum (Potato) & (at1g76550 : 1052.0) Phosphofructokinase family protein; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT1G20950.1); Has 4956 Blast hits to 4876 proteins in 1678 species: Archae - 20; Bacteria - 3823; Metazoa - 10; Fungi - 6; Plants - 430; Viruses - 0; Other Eukaryotes - 667 (source: NCBI BLink). & (gnl|cdd|75922 : 555.0) no description available & (gnl|cdd|37651 : 527.0) no description available & (reliability: 2104.0) & (original description: Putative pfk, Description = 6-phosphofructokinase, pyrophosphate dependent, PFAM = PF00365)' T '4.1.6' 'glycolysis.cytosolic branch.fructose-2,6-bisphosphatase (Fru2,6BisPase)' 'niben101scf00056_356857-396574' '(at1g07110 : 1060.0) Encodes the bifunctional enzyme fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase.; "fructose-2,6-bisphosphatase" (F2KP); FUNCTIONS IN: fructose-2,6-bisphosphate 2-phosphatase activity; INVOLVED IN: N-terminal protein myristoylation, fructose metabolic process; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional 6-phosphofructo-2-kinase/fructose-2, 6-bisphosphate 2-phosphatase (InterPro:IPR016260), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Fructose-2,6-bisphosphatase (InterPro:IPR003094), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), 6-phosphofructo-2-kinase (InterPro:IPR013079); BEST Arabidopsis thaliana protein match is: Plant transposase (Ptta/En/Spm family) (TAIR:AT3G30200.1); Has 5078 Blast hits to 4946 proteins in 1364 species: Archae - 8; Bacteria - 3312; Metazoa - 533; Fungi - 529; Plants - 140; Viruses - 0; Other Eukaryotes - 556 (source: NCBI BLink). & (gnl|cdd|35455 : 455.0) no description available & (gnl|cdd|85552 : 287.0) no description available & (reliability: 2120.0) & (original description: Putative FKFBP, Description = 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, PFAM = PF01591;PF00300;PF00686)' T '4.1.6' 'glycolysis.cytosolic branch.fructose-2,6-bisphosphatase (Fru2,6BisPase)' 'niben101scf08724_230628-250193' '(at1g07110 : 1101.0) Encodes the bifunctional enzyme fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase.; "fructose-2,6-bisphosphatase" (F2KP); FUNCTIONS IN: fructose-2,6-bisphosphate 2-phosphatase activity; INVOLVED IN: N-terminal protein myristoylation, fructose metabolic process; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional 6-phosphofructo-2-kinase/fructose-2, 6-bisphosphate 2-phosphatase (InterPro:IPR016260), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Fructose-2,6-bisphosphatase (InterPro:IPR003094), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), 6-phosphofructo-2-kinase (InterPro:IPR013079); BEST Arabidopsis thaliana protein match is: Plant transposase (Ptta/En/Spm family) (TAIR:AT3G30200.1); Has 5078 Blast hits to 4946 proteins in 1364 species: Archae - 8; Bacteria - 3312; Metazoa - 533; Fungi - 529; Plants - 140; Viruses - 0; Other Eukaryotes - 556 (source: NCBI BLink). & (gnl|cdd|35455 : 464.0) no description available & (gnl|cdd|85552 : 289.0) no description available & (reliability: 2202.0) & (original description: Putative FKFBP, Description = 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, PFAM = PF01591;PF00300;PF00686)' T '4.1.7' 'glycolysis.cytosolic branch.triosephosphate isomerase (TPI)' 'niben101scf02869_1719066-1734124' '(p48495|tpis_pethy : 412.0) Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Petunia hybrida (Petunia) & (gnl|cdd|36856 : 386.0) no description available & (at3g55440 : 379.0) Encodes triosephosphate isomerase.; triosephosphate isomerase (TPI); FUNCTIONS IN: triose-phosphate isomerase activity, copper ion binding; INVOLVED IN: in 7 processes; LOCATED IN: in 8 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT2G21170.1); Has 11466 Blast hits to 11464 proteins in 3595 species: Archae - 48; Bacteria - 6204; Metazoa - 1205; Fungi - 243; Plants - 477; Viruses - 0; Other Eukaryotes - 3289 (source: NCBI BLink). & (gnl|cdd|73362 : 319.0) no description available & (reliability: 758.0) & (original description: Putative TPIP1, Description = Triosephosphate isomerase, cytosolic, PFAM = PF00121)' T '4.1.7' 'glycolysis.cytosolic branch.triosephosphate isomerase (TPI)' 'niben101scf03493_43919-51633' '(p48495|tpis_pethy : 424.0) Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Petunia hybrida (Petunia) & (at3g55440 : 395.0) Encodes triosephosphate isomerase.; triosephosphate isomerase (TPI); FUNCTIONS IN: triose-phosphate isomerase activity, copper ion binding; INVOLVED IN: in 7 processes; LOCATED IN: in 8 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT2G21170.1); Has 11466 Blast hits to 11464 proteins in 3595 species: Archae - 48; Bacteria - 6204; Metazoa - 1205; Fungi - 243; Plants - 477; Viruses - 0; Other Eukaryotes - 3289 (source: NCBI BLink). & (gnl|cdd|36856 : 383.0) no description available & (gnl|cdd|73362 : 317.0) no description available & (reliability: 790.0) & (original description: Putative TPIP1, Description = Triosephosphate isomerase, cytosolic, PFAM = PF00121)' T '4.1.7' 'glycolysis.cytosolic branch.triosephosphate isomerase (TPI)' 'niben101scf33454_151045-160623' '(p48495|tpis_pethy : 418.0) Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Petunia hybrida (Petunia) & (at3g55440 : 416.0) Encodes triosephosphate isomerase.; triosephosphate isomerase (TPI); FUNCTIONS IN: triose-phosphate isomerase activity, copper ion binding; INVOLVED IN: in 7 processes; LOCATED IN: in 8 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT2G21170.1); Has 11466 Blast hits to 11464 proteins in 3595 species: Archae - 48; Bacteria - 6204; Metazoa - 1205; Fungi - 243; Plants - 477; Viruses - 0; Other Eukaryotes - 3289 (source: NCBI BLink). & (gnl|cdd|36856 : 372.0) no description available & (gnl|cdd|73362 : 309.0) no description available & (reliability: 832.0) & (original description: Putative TPI, Description = TPI, PFAM = PF00121)' T '4.1.8' 'glycolysis.cytosolic branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'nbv0.3scaffold485_75377-80175' '(p26520|g3pc_pethy : 600.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) - Petunia hybrida (Petunia) & (at1g13440 : 569.0) glyceraldehyde-3-phosphate dehydrogenase C2 (GAPC2); FUNCTIONS IN: copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, gluconeogenesis, defense response to bacterium, glycolysis; LOCATED IN: cytosol, mitochondrion, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (TAIR:AT3G04120.1); Has 25183 Blast hits to 25173 proteins in 6340 species: Archae - 41; Bacteria - 10793; Metazoa - 2402; Fungi - 2843; Plants - 3866; Viruses - 0; Other Eukaryotes - 5238 (source: NCBI BLink). & (gnl|cdd|30406 : 446.0) no description available & (gnl|cdd|35876 : 377.0) no description available & (reliability: 1138.0) & (original description: Putative gapA, Description = Glyceraldehyde-3-phosphate dehydrogenase, PFAM = PF00044;PF02800)' T '4.1.8' 'glycolysis.cytosolic branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'nbv0.3scaffold47718_9521-14832' '(p26519|g3pc_petcr : 595.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at1g13440 : 580.0) glyceraldehyde-3-phosphate dehydrogenase C2 (GAPC2); FUNCTIONS IN: copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, gluconeogenesis, defense response to bacterium, glycolysis; LOCATED IN: cytosol, mitochondrion, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (TAIR:AT3G04120.1); Has 25183 Blast hits to 25173 proteins in 6340 species: Archae - 41; Bacteria - 10793; Metazoa - 2402; Fungi - 2843; Plants - 3866; Viruses - 0; Other Eukaryotes - 5238 (source: NCBI BLink). & (gnl|cdd|30406 : 446.0) no description available & (gnl|cdd|35876 : 367.0) no description available & (reliability: 1160.0) & (original description: Putative gap, Description = Glyceraldehyde-3-phosphate dehydrogenase, PFAM = PF02800;PF00044)' T '4.1.8' 'glycolysis.cytosolic branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'nbv0.5scaffold4939_12539-16777' '(p26520|g3pc_pethy : 435.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) - Petunia hybrida (Petunia) & (at1g13440 : 422.0) glyceraldehyde-3-phosphate dehydrogenase C2 (GAPC2); FUNCTIONS IN: copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, gluconeogenesis, defense response to bacterium, glycolysis; LOCATED IN: cytosol, mitochondrion, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (TAIR:AT3G04120.1); Has 25183 Blast hits to 25173 proteins in 6340 species: Archae - 41; Bacteria - 10793; Metazoa - 2402; Fungi - 2843; Plants - 3866; Viruses - 0; Other Eukaryotes - 5238 (source: NCBI BLink). & (gnl|cdd|30406 : 306.0) no description available & (gnl|cdd|35876 : 258.0) no description available & (reliability: 844.0) & (original description: Putative gap, Description = Glyceraldehyde-3-phosphate dehydrogenase, PFAM = PF02800;PF00044)' T '4.1.8' 'glycolysis.cytosolic branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'niben101scf01073_565468-570420' '(p09094|g3pc_tobac : 606.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) (Fragment) - Nicotiana tabacum (Common tobacco) & (at3g04120 : 580.0) encodes cytosolic GADPH (C subunit) involved in the glycolytic pathway but also interacts with H2O2 potentially placing it in a signalling cascade induced by ROS.; glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (GAPC1); FUNCTIONS IN: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: in 11 processes; LOCATED IN: in 8 components; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C2 (TAIR:AT1G13440.1); Has 25372 Blast hits to 25360 proteins in 6350 species: Archae - 71; Bacteria - 10995; Metazoa - 2358; Fungi - 2851; Plants - 3864; Viruses - 0; Other Eukaryotes - 5233 (source: NCBI BLink). & (gnl|cdd|30406 : 451.0) no description available & (gnl|cdd|35876 : 380.0) no description available & (reliability: 1160.0) & (original description: Putative GAPC1, Description = Glyceraldehyde-3-phosphate dehydrogenase GAPC1, cytosolic, PFAM = PF00044;PF02800)' T '4.1.8' 'glycolysis.cytosolic branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'niben101scf02914_361345-365417' '(p09094|g3pc_tobac : 323.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) (Fragment) - Nicotiana tabacum (Common tobacco) & (at3g04120 : 318.0) encodes cytosolic GADPH (C subunit) involved in the glycolytic pathway but also interacts with H2O2 potentially placing it in a signalling cascade induced by ROS.; glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (GAPC1); FUNCTIONS IN: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: in 11 processes; LOCATED IN: in 8 components; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C2 (TAIR:AT1G13440.1); Has 25372 Blast hits to 25360 proteins in 6350 species: Archae - 71; Bacteria - 10995; Metazoa - 2358; Fungi - 2851; Plants - 3864; Viruses - 0; Other Eukaryotes - 5233 (source: NCBI BLink). & (gnl|cdd|30406 : 272.0) no description available & (gnl|cdd|35876 : 206.0) no description available & (reliability: 636.0) & (original description: Putative gap, Description = Glyceraldehyde-3-phosphate dehydrogenase, PFAM = PF02800)' T '4.1.8' 'glycolysis.cytosolic branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'niben101scf02914_362173-366864' '(p26520|g3pc_pethy : 597.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) - Petunia hybrida (Petunia) & (at1g13440 : 576.0) glyceraldehyde-3-phosphate dehydrogenase C2 (GAPC2); FUNCTIONS IN: copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, gluconeogenesis, defense response to bacterium, glycolysis; LOCATED IN: cytosol, mitochondrion, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (TAIR:AT3G04120.1); Has 25183 Blast hits to 25173 proteins in 6340 species: Archae - 41; Bacteria - 10793; Metazoa - 2402; Fungi - 2843; Plants - 3866; Viruses - 0; Other Eukaryotes - 5238 (source: NCBI BLink). & (gnl|cdd|30406 : 448.0) no description available & (gnl|cdd|35876 : 386.0) no description available & (reliability: 1152.0) & (original description: Putative gap, Description = Glyceraldehyde-3-phosphate dehydrogenase, PFAM = PF02800;PF00044)' T '4.1.8' 'glycolysis.cytosolic branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'niben101scf03099_301110-306999' '(p26519|g3pc_petcr : 601.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at1g13440 : 588.0) glyceraldehyde-3-phosphate dehydrogenase C2 (GAPC2); FUNCTIONS IN: copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, gluconeogenesis, defense response to bacterium, glycolysis; LOCATED IN: cytosol, mitochondrion, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (TAIR:AT3G04120.1); Has 25183 Blast hits to 25173 proteins in 6340 species: Archae - 41; Bacteria - 10793; Metazoa - 2402; Fungi - 2843; Plants - 3866; Viruses - 0; Other Eukaryotes - 5238 (source: NCBI BLink). & (gnl|cdd|30406 : 447.0) no description available & (gnl|cdd|35876 : 369.0) no description available & (reliability: 1176.0) & (original description: Putative GAPC, Description = Glyceraldehyde-3-phosphate dehydrogenase, cytosolic, PFAM = PF02800;PF00044)' T '4.1.8' 'glycolysis.cytosolic branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'niben101scf04905_382304-386761' '(p09094|g3pc_tobac : 604.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) (Fragment) - Nicotiana tabacum (Common tobacco) & (at3g04120 : 580.0) encodes cytosolic GADPH (C subunit) involved in the glycolytic pathway but also interacts with H2O2 potentially placing it in a signalling cascade induced by ROS.; glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (GAPC1); FUNCTIONS IN: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: in 11 processes; LOCATED IN: in 8 components; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C2 (TAIR:AT1G13440.1); Has 25372 Blast hits to 25360 proteins in 6350 species: Archae - 71; Bacteria - 10995; Metazoa - 2358; Fungi - 2851; Plants - 3864; Viruses - 0; Other Eukaryotes - 5233 (source: NCBI BLink). & (gnl|cdd|30406 : 450.0) no description available & (gnl|cdd|35876 : 378.0) no description available & (reliability: 1160.0) & (original description: Putative GAPC1, Description = Glyceraldehyde-3-phosphate dehydrogenase GAPC1, cytosolic, PFAM = PF00044;PF02800)' T '4.1.8' 'glycolysis.cytosolic branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'niben101scf08544_12332-17188' '(p26520|g3pc_pethy : 601.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) - Petunia hybrida (Petunia) & (at1g13440 : 571.0) glyceraldehyde-3-phosphate dehydrogenase C2 (GAPC2); FUNCTIONS IN: copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, gluconeogenesis, defense response to bacterium, glycolysis; LOCATED IN: cytosol, mitochondrion, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (TAIR:AT3G04120.1); Has 25183 Blast hits to 25173 proteins in 6340 species: Archae - 41; Bacteria - 10793; Metazoa - 2402; Fungi - 2843; Plants - 3866; Viruses - 0; Other Eukaryotes - 5238 (source: NCBI BLink). & (gnl|cdd|30406 : 448.0) no description available & (gnl|cdd|35876 : 379.0) no description available & (reliability: 1142.0) & (original description: Putative GAPC, Description = Glyceraldehyde-3-phosphate dehydrogenase, cytosolic, PFAM = PF00044;PF02800)' T '4.1.9' 'glycolysis.cytosolic branch.non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NPGAP-DH)' 'niben101scf05250_360170-368419' '(p93338|gapn_nicpl : 999.0) NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.9) (Non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase) (Glyceraldehyde-3-phosphate dehydrogenase [NADP+]) (Triosephosphate dehydrogenase) - Nicotiana plumbagin & (at2g24270 : 922.0) Encodes a protein with non-phosphorylating NADP-dependent glyceraldehyde-3-phosphate dehydrogenase activity. The activity of the enzyme was determined from leaf extracts; the enzyme has not been purified to confirm activity.; aldehyde dehydrogenase 11A3 (ALDH11A3); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A8 (TAIR:AT1G74920.1). & (gnl|cdd|37661 : 475.0) no description available & (gnl|cdd|84580 : 460.0) no description available & (reliability: 1844.0) & (original description: Putative GAPN, Description = NADP-dependent glyceraldehyde-3-phosphate dehydrogenase, PFAM = PF00171)' T '4.1.9' 'glycolysis.cytosolic branch.non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NPGAP-DH)' 'niben101scf39473_52340-59555' '(p93338|gapn_nicpl : 994.0) NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.9) (Non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase) (Glyceraldehyde-3-phosphate dehydrogenase [NADP+]) (Triosephosphate dehydrogenase) - Nicotiana plumbagin & (at2g24270 : 919.0) Encodes a protein with non-phosphorylating NADP-dependent glyceraldehyde-3-phosphate dehydrogenase activity. The activity of the enzyme was determined from leaf extracts; the enzyme has not been purified to confirm activity.; aldehyde dehydrogenase 11A3 (ALDH11A3); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A8 (TAIR:AT1G74920.1). & (gnl|cdd|37661 : 472.0) no description available & (gnl|cdd|84580 : 458.0) no description available & (reliability: 1838.0) & (original description: Putative GAPN, Description = NADP-dependent glyceraldehyde-3-phosphate dehydrogenase, PFAM = PF00171)' T '4.1.10' 'glycolysis.cytosolic branch.aldolase' 'nbv0.3scaffold39997_10712-15185' '(gnl|cdd|84661 : 618.0) no description available & (at4g26530 : 603.0) Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: glycolysis, metabolic process; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT4G26520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46256|alf1_pea : 594.0) Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 (EC 4.1.2.13) - Pisum sativum (Garden pea) & (gnl|cdd|36770 : 583.0) no description available & (reliability: 1118.0) & (original description: Putative ald, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T '4.1.10' 'glycolysis.cytosolic branch.aldolase' 'nbv0.3scaffold41032_7542-12672' '(gnl|cdd|84661 : 614.0) no description available & (at4g26530 : 597.0) Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: glycolysis, metabolic process; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT4G26520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46256|alf1_pea : 590.0) Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 (EC 4.1.2.13) - Pisum sativum (Garden pea) & (gnl|cdd|36770 : 579.0) no description available & (reliability: 1104.0) & (original description: Putative ald, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T '4.1.10' 'glycolysis.cytosolic branch.aldolase' 'nbv0.5scaffold1469_367538-372476' '(gnl|cdd|84661 : 614.0) no description available & (at4g26530 : 592.0) Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: glycolysis, metabolic process; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT4G26520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46256|alf1_pea : 583.0) Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 (EC 4.1.2.13) - Pisum sativum (Garden pea) & (gnl|cdd|36770 : 576.0) no description available & (reliability: 1096.0) & (original description: Putative ald, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T '4.1.10' 'glycolysis.cytosolic branch.aldolase' 'niben044scf00050323ctg000_12010-18482' '(gnl|cdd|84661 : 611.0) no description available & (p17784|alf_orysa : 600.0) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) & (at2g36460 : 597.0) Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to salt stress, pentose-phosphate shunt; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT3G52930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36770 : 586.0) no description available & (reliability: 1194.0) & (original description: Putative alf, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T '4.1.10' 'glycolysis.cytosolic branch.aldolase' 'niben101scf00302_116509-123697' '(gnl|cdd|84661 : 614.0) no description available & (p17784|alf_orysa : 603.0) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) & (at2g36460 : 599.0) Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to salt stress, pentose-phosphate shunt; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT3G52930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36770 : 588.0) no description available & (reliability: 1198.0) & (original description: Putative alf, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T '4.1.10' 'glycolysis.cytosolic branch.aldolase' 'niben101scf00675_158544-163325' '(gnl|cdd|84661 : 616.0) no description available & (at4g26530 : 595.0) Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: glycolysis, metabolic process; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT4G26520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46256|alf1_pea : 587.0) Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 (EC 4.1.2.13) - Pisum sativum (Garden pea) & (gnl|cdd|36770 : 577.0) no description available & (reliability: 1100.0) & (original description: Putative ald, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T '4.1.10' 'glycolysis.cytosolic branch.aldolase' 'niben101scf03580_286138-289953' '(gnl|cdd|84661 : 615.0) no description available & (at2g36460 : 604.0) Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to salt stress, pentose-phosphate shunt; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT3G52930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p17784|alf_orysa : 602.0) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) & (gnl|cdd|36770 : 592.0) no description available & (reliability: 1208.0) & (original description: Putative fba, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T '4.1.10' 'glycolysis.cytosolic branch.aldolase' 'niben101scf09014_104627-108475' '(gnl|cdd|84661 : 617.0) no description available & (at2g36460 : 607.0) Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to salt stress, pentose-phosphate shunt; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT3G52930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p17784|alf_orysa : 602.0) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) & (gnl|cdd|36770 : 595.0) no description available & (reliability: 1214.0) & (original description: Putative alf, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T '4.1.11' 'glycolysis.cytosolic branch.3-phosphoglycerate kinase (PGK)' 'nbv0.3scaffold84109_1-4617' '(q42961|pgkh_tobac : 851.0) Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) - Nicotiana tabacum (Common tobacco) & (at1g56190 : 711.0) Phosphoglycerate kinase family protein; FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: glycolysis; LOCATED IN: thylakoid, mitochondrion, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901), Phosphoglycerate kinase, conserved site (InterPro:IPR015911); BEST Arabidopsis thaliana protein match is: phosphoglycerate kinase 1 (TAIR:AT3G12780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80491 : 581.0) no description available & (gnl|cdd|36581 : 544.0) no description available & (reliability: 1288.0) & (original description: Putative pgk, Description = Phosphoglycerate kinase, PFAM = PF00162)' T '4.1.11' 'glycolysis.cytosolic branch.3-phosphoglycerate kinase (PGK)' 'niben101scf02139_377272-387984' '(gnl|cdd|80491 : 186.0) no description available & (p12783|pgky_wheat : 172.0) Phosphoglycerate kinase, cytosolic (EC 2.7.2.3) - Triticum aestivum (Wheat) & (at3g12780 : 164.0) nuclear phosphoglycerate kinase (PGK1); phosphoglycerate kinase 1 (PGK1); FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: response to cadmium ion, response to cold, glycolysis, peptidyl-cysteine S-nitrosylation; LOCATED IN: in 11 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901), Phosphoglycerate kinase, conserved site (InterPro:IPR015911); BEST Arabidopsis thaliana protein match is: Phosphoglycerate kinase family protein (TAIR:AT1G56190.1); Has 10843 Blast hits to 10817 proteins in 3010 species: Archae - 254; Bacteria - 5217; Metazoa - 451; Fungi - 193; Plants - 515; Viruses - 0; Other Eukaryotes - 4213 (source: NCBI BLink). & (gnl|cdd|36581 : 151.0) no description available & (reliability: 310.0) & (original description: Putative PGSC0003DMG400003882, Description = Phosphoglycerate kinase, PFAM = PF00162;PF02390)' T '4.1.11' 'glycolysis.cytosolic branch.3-phosphoglycerate kinase (PGK)' 'niben101scf02461_6816-12166' '(q42962|pgky_tobac : 728.0) Phosphoglycerate kinase, cytosolic (EC 2.7.2.3) - Nicotiana tabacum (Common tobacco) & (at1g79550 : 664.0) Encodes cytosolic phosphoglycerate kinase (PGK).; phosphoglycerate kinase (PGK); FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: glycolysis; LOCATED IN: cytosol, apoplast, plasma membrane, nucleus, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901); BEST Arabidopsis thaliana protein match is: Phosphoglycerate kinase family protein (TAIR:AT1G56190.1); Has 10844 Blast hits to 10818 proteins in 3011 species: Archae - 254; Bacteria - 5218; Metazoa - 451; Fungi - 193; Plants - 517; Viruses - 0; Other Eukaryotes - 4211 (source: NCBI BLink). & (gnl|cdd|80491 : 585.0) no description available & (gnl|cdd|36581 : 530.0) no description available & (reliability: 1328.0) & (original description: Putative pgk, Description = Phosphoglycerate kinase, PFAM = PF00162)' T '4.1.11' 'glycolysis.cytosolic branch.3-phosphoglycerate kinase (PGK)' 'niben101scf02461_21557-26261' '(q42961|pgkh_tobac : 853.0) Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) - Nicotiana tabacum (Common tobacco) & (at1g56190 : 708.0) Phosphoglycerate kinase family protein; FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: glycolysis; LOCATED IN: thylakoid, mitochondrion, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901), Phosphoglycerate kinase, conserved site (InterPro:IPR015911); BEST Arabidopsis thaliana protein match is: phosphoglycerate kinase 1 (TAIR:AT3G12780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80491 : 582.0) no description available & (gnl|cdd|36581 : 545.0) no description available & (reliability: 1280.0) & (original description: Putative pgk, Description = Phosphoglycerate kinase, PFAM = PF00162)' T '4.1.11' 'glycolysis.cytosolic branch.3-phosphoglycerate kinase (PGK)' 'niben101scf03856_11161-16555' '(q42962|pgky_tobac : 705.0) Phosphoglycerate kinase, cytosolic (EC 2.7.2.3) - Nicotiana tabacum (Common tobacco) & (at1g79550 : 655.0) Encodes cytosolic phosphoglycerate kinase (PGK).; phosphoglycerate kinase (PGK); FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: glycolysis; LOCATED IN: cytosol, apoplast, plasma membrane, nucleus, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901); BEST Arabidopsis thaliana protein match is: Phosphoglycerate kinase family protein (TAIR:AT1G56190.1); Has 10844 Blast hits to 10818 proteins in 3011 species: Archae - 254; Bacteria - 5218; Metazoa - 451; Fungi - 193; Plants - 517; Viruses - 0; Other Eukaryotes - 4211 (source: NCBI BLink). & (gnl|cdd|80491 : 588.0) no description available & (gnl|cdd|36581 : 535.0) no description available & (reliability: 1310.0) & (original description: Putative pgk, Description = Phosphoglycerate kinase, PFAM = PF00162)' T '4.1.11' 'glycolysis.cytosolic branch.3-phosphoglycerate kinase (PGK)' 'niben101scf05295_574572-580226' '(q42962|pgky_tobac : 706.0) Phosphoglycerate kinase, cytosolic (EC 2.7.2.3) - Nicotiana tabacum (Common tobacco) & (at1g79550 : 661.0) Encodes cytosolic phosphoglycerate kinase (PGK).; phosphoglycerate kinase (PGK); FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: glycolysis; LOCATED IN: cytosol, apoplast, plasma membrane, nucleus, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901); BEST Arabidopsis thaliana protein match is: Phosphoglycerate kinase family protein (TAIR:AT1G56190.1); Has 10844 Blast hits to 10818 proteins in 3011 species: Archae - 254; Bacteria - 5218; Metazoa - 451; Fungi - 193; Plants - 517; Viruses - 0; Other Eukaryotes - 4211 (source: NCBI BLink). & (gnl|cdd|80491 : 589.0) no description available & (gnl|cdd|36581 : 540.0) no description available & (reliability: 1322.0) & (original description: Putative pgk, Description = Phosphoglycerate kinase, PFAM = PF00162)' T '4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'nbv0.5scaffold180_292288-301515' '(at3g05170 : 421.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|30755 : 93.0) no description available & (reliability: 758.0) & (original description: Putative At3g05170, Description = Phosphoglycerate mutase-like protein AT74, PFAM = PF00300)' T '4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben044scf00002827ctg002_1-2000' '(at3g05170 : 228.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|84677 : 82.1) no description available & (reliability: 434.0) & (original description: Putative DET1, Description = Phosphoglycerate mutase, PFAM = PF00300)' T '4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben044scf00021228ctg009_10537-13654' '(at3g05170 : 232.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|84677 : 81.7) no description available & (reliability: 438.0) & (original description: Putative PGSC0003DMG401028569, Description = Phosphoglycerate mutase, PFAM = PF00300)' T '4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben044scf00057664ctg001_1-1984' '(p35494|pmgi_tobac : 258.0) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I) - Nicotiana tabacum (Common tobacco) & (at1g09780 : 234.0) Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; FUNCTIONS IN: manganese ion binding, phosphoglycerate mutase activity, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity, catalytic activity, metal ion binding; INVOLVED IN: response to cadmium ion, response to cold; LOCATED IN: mitochondrial envelope, cytosol, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), Metalloenzyme (InterPro:IPR006124), BPG-independent PGAM, N-terminal (InterPro:IPR011258), Alkaline-phosphatase-like, core domain (InterPro:IPR017850), Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (InterPro:IPR005995); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (TAIR:AT3G08590.2); Has 4822 Blast hits to 4813 proteins in 1698 species: Archae - 54; Bacteria - 3035; Metazoa - 34; Fungi - 85; Plants - 379; Viruses - 0; Other Eukaryotes - 1235 (source: NCBI BLink). & (gnl|cdd|39713 : 190.0) no description available & (gnl|cdd|69909 : 162.0) no description available & (reliability: 468.0) & (original description: Putative apgM, Description = Phosphoglycerate mutase (2,3-diphosphoglycerate-independent), PFAM = PF01676;PF06415)' T '4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben044scf00060234ctg000_1-1703' '(at1g08940 : 160.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G05170.1); Has 1152 Blast hits to 1140 proteins in 473 species: Archae - 9; Bacteria - 736; Metazoa - 2; Fungi - 189; Plants - 85; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative PGSC0003DMG401028570, Description = Phosphoglycerate/bisphosphoglycerate mutase family protein, PFAM = PF00300)' T '4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben101scf00582_262324-267243' '(at3g30841 : 795.0) Cofactor-independent phosphoglycerate mutase; FUNCTIONS IN: catalytic activity, metal ion binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cofactor-independent phosphoglycerate mutase, archaeal (InterPro:IPR004456), Metalloenzyme (InterPro:IPR006124), Alkaline-phosphatase-like, core domain (InterPro:IPR017850), 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (InterPro:IPR019304); BEST Arabidopsis thaliana protein match is: Cofactor-independent phosphoglycerate mutase (TAIR:AT4G09520.1); Has 887 Blast hits to 887 proteins in 338 species: Archae - 293; Bacteria - 440; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|81263 : 340.0) no description available & (reliability: 1590.0) & (original description: Putative At4g09520, Description = Cofactor-independent phosphoglycerate mutase, PFAM = PF01676;PF10143)' T '4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben101scf00963_297720-307687' '(at1g08940 : 160.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G05170.1); Has 1152 Blast hits to 1140 proteins in 473 species: Archae - 9; Bacteria - 736; Metazoa - 2; Fungi - 189; Plants - 85; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative PGSC0003DMG401028570, Description = Phosphoglycerate/bisphosphoglycerate mutase family protein, PFAM = PF00300)' T '4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben101scf01631_12469-17611' '(at1g58280 : 271.0) Phosphoglycerate mutase family protein; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT5G64460.8). & (gnl|cdd|39951 : 204.0) no description available & (reliability: 498.0) & (original description: Putative F5J6, Description = Phosphoglycerate mutase-like protein, PFAM = PF00300)' T '4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben101scf03222_423092-425524' '(at3g05170 : 150.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative At1g08940, Description = At1g08940, PFAM = PF00300)' T '4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben101scf03277_264292-269239' '(at3g30841 : 769.0) Cofactor-independent phosphoglycerate mutase; FUNCTIONS IN: catalytic activity, metal ion binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cofactor-independent phosphoglycerate mutase, archaeal (InterPro:IPR004456), Metalloenzyme (InterPro:IPR006124), Alkaline-phosphatase-like, core domain (InterPro:IPR017850), 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (InterPro:IPR019304); BEST Arabidopsis thaliana protein match is: Cofactor-independent phosphoglycerate mutase (TAIR:AT4G09520.1); Has 887 Blast hits to 887 proteins in 338 species: Archae - 293; Bacteria - 440; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|81263 : 346.0) no description available & (reliability: 1538.0) & (original description: Putative At4g09520, Description = Cofactor-independent phosphoglycerate mutase, PFAM = PF10143;PF01676)' T '4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben101scf04015_56537-61526' '(at3g05170 : 399.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|84677 : 94.8) no description available & (reliability: 772.0) & (original description: Putative At1g08940, Description = Phosphoglycerate mutase-like protein AT74H, PFAM = PF00300)' T '4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben101scf04015_94661-99064' '(at3g05170 : 273.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|84677 : 90.2) no description available & (reliability: 534.0) & (original description: Putative PGSC0003DMG401028570, Description = Phosphoglycerate/bisphosphoglycerate mutase family protein, PFAM = PF00300)' T '4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben101scf05782_91364-99244' '(p35494|pmgi_tobac : 1064.0) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I) - Nicotiana tabacum (Common tobacco) & (at3g08590 : 922.0) Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; FUNCTIONS IN: manganese ion binding, phosphoglycerate mutase activity, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity, catalytic activity, metal ion binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), BPG-independent PGAM, N-terminal (InterPro:IPR011258), Metalloenzyme (InterPro:IPR006124), Alkaline-phosphatase-like, core domain (InterPro:IPR017850), Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (InterPro:IPR005995); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (TAIR:AT1G09780.1); Has 4794 Blast hits to 4787 proteins in 1681 species: Archae - 54; Bacteria - 3006; Metazoa - 34; Fungi - 85; Plants - 379; Viruses - 0; Other Eukaryotes - 1236 (source: NCBI BLink). & (gnl|cdd|39713 : 732.0) no description available & (gnl|cdd|81587 : 513.0) no description available & (reliability: 1844.0) & (original description: Putative apgM, Description = Phosphoglycerate mutase (2,3-diphosphoglycerate-independent), PFAM = PF01676;PF06415)' T '4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben101scf05837_627042-637253' '(at5g64460 : 422.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G58280.1). & (gnl|cdd|39951 : 326.0) no description available & (reliability: 762.0) & (original description: Putative At5g64460, Description = Phosphoglycerate mutase-like protein 1, PFAM = PF00300)' T '4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben101scf06866_137141-144014' '(at3g05170 : 422.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|84677 : 94.1) no description available & (reliability: 770.0) & (original description: Putative At3g05170, Description = Phosphoglycerate mutase-like protein AT74, PFAM = PF00300)' T '4.1.12' 'glycolysis.cytosolic branch.phosphoglycerate mutase' 'niben101scf13411_548927-556536' '(p35494|pmgi_tobac : 1073.0) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I) - Nicotiana tabacum (Common tobacco) & (at3g08590 : 930.0) Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; FUNCTIONS IN: manganese ion binding, phosphoglycerate mutase activity, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity, catalytic activity, metal ion binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), BPG-independent PGAM, N-terminal (InterPro:IPR011258), Metalloenzyme (InterPro:IPR006124), Alkaline-phosphatase-like, core domain (InterPro:IPR017850), Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (InterPro:IPR005995); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (TAIR:AT1G09780.1); Has 4794 Blast hits to 4787 proteins in 1681 species: Archae - 54; Bacteria - 3006; Metazoa - 34; Fungi - 85; Plants - 379; Viruses - 0; Other Eukaryotes - 1236 (source: NCBI BLink). & (gnl|cdd|39713 : 738.0) no description available & (gnl|cdd|81587 : 509.0) no description available & (reliability: 1860.0) & (original description: Putative apgM, Description = Phosphoglycerate mutase (2,3-diphosphoglycerate-independent), PFAM = PF06415;PF01676)' T '4.1.13' 'glycolysis.cytosolic branch.enolase' 'nbv0.3scaffold1517_4702-19283' '(at2g29560 : 635.0) Encodes a putative phosphoenolpyruvate enolase that is localized both to the nucleus and the cytoplasm.; cytosolic enolase (ENOC); FUNCTIONS IN: phosphopyruvate hydratase activity, magnesium ion binding; INVOLVED IN: glycolysis; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Enolase (InterPro:IPR000941), Enolase, C-terminal (InterPro:IPR020810), Enolase, conserved site (InterPro:IPR020809), Enolase, N-terminal (InterPro:IPR020811); BEST Arabidopsis thaliana protein match is: Enolase (TAIR:AT2G36530.1); Has 13178 Blast hits to 13156 proteins in 3650 species: Archae - 272; Bacteria - 5726; Metazoa - 2098; Fungi - 281; Plants - 257; Viruses - 0; Other Eukaryotes - 4544 (source: NCBI BLink). & (gnl|cdd|37881 : 573.0) no description available & (gnl|cdd|48188 : 531.0) no description available & (p42896|eno_ricco : 446.0) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) - Ricinus communis (Castor bean) & (reliability: 1270.0) & (original description: Putative ENO3, Description = Cytosolic enolase 3, PFAM = PF03952;PF00113)' T '4.1.13' 'glycolysis.cytosolic branch.enolase' 'nbv0.3scaffold13303_37321-42871' '(at2g36530 : 793.0) Involved in light-dependent cold tolerance and encodes an enolase. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2 (LOS2); FUNCTIONS IN: phosphopyruvate hydratase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to salt stress, response to cold, response to light stimulus, response to abscisic acid stimulus; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Enolase (InterPro:IPR000941), Enolase, C-terminal (InterPro:IPR020810), Enolase, conserved site (InterPro:IPR020809), Enolase, N-terminal (InterPro:IPR020811); BEST Arabidopsis thaliana protein match is: enolase 1 (TAIR:AT1G74030.1); Has 13396 Blast hits to 13370 proteins in 3710 species: Archae - 270; Bacteria - 5735; Metazoa - 2292; Fungi - 281; Plants - 265; Viruses - 0; Other Eukaryotes - 4553 (source: NCBI BLink). & (p42895|eno2_maize : 786.0) Enolase 2 (EC 4.2.1.11) (2-phosphoglycerate dehydratase 2) (2-phospho-D-glycerate hydro-lyase 2) - Zea mays (Maize) & (gnl|cdd|37881 : 713.0) no description available & (gnl|cdd|48188 : 685.0) no description available & (reliability: 1586.0) & (original description: Putative PGH1, Description = Enolase, PFAM = PF03952;PF00113)' T '4.1.13' 'glycolysis.cytosolic branch.enolase' 'niben044scf00020804ctg002_16207-21175' '(q9lei9|eno2_hevbr : 510.0) Enolase 2 (EC 4.2.1.11) (2-phosphoglycerate dehydratase 2) (2-phospho-D-glycerate hydro-lyase 2) (Allergen Hev b 9) - Hevea brasiliensis (Para rubber tree) & (at2g36530 : 508.0) Involved in light-dependent cold tolerance and encodes an enolase. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2 (LOS2); FUNCTIONS IN: phosphopyruvate hydratase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to salt stress, response to cold, response to light stimulus, response to abscisic acid stimulus; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Enolase (InterPro:IPR000941), Enolase, C-terminal (InterPro:IPR020810), Enolase, conserved site (InterPro:IPR020809), Enolase, N-terminal (InterPro:IPR020811); BEST Arabidopsis thaliana protein match is: enolase 1 (TAIR:AT1G74030.1); Has 13396 Blast hits to 13370 proteins in 3710 species: Archae - 270; Bacteria - 5735; Metazoa - 2292; Fungi - 281; Plants - 265; Viruses - 0; Other Eukaryotes - 4553 (source: NCBI BLink). & (gnl|cdd|37881 : 447.0) no description available & (gnl|cdd|48188 : 447.0) no description available & (reliability: 1016.0) & (original description: Putative eno, Description = Enolase, PFAM = PF00113;PF03952)' T '4.1.13' 'glycolysis.cytosolic branch.enolase' 'niben101scf05392_142686-148752' '(at2g36530 : 792.0) Involved in light-dependent cold tolerance and encodes an enolase. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2 (LOS2); FUNCTIONS IN: phosphopyruvate hydratase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to salt stress, response to cold, response to light stimulus, response to abscisic acid stimulus; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Enolase (InterPro:IPR000941), Enolase, C-terminal (InterPro:IPR020810), Enolase, conserved site (InterPro:IPR020809), Enolase, N-terminal (InterPro:IPR020811); BEST Arabidopsis thaliana protein match is: enolase 1 (TAIR:AT1G74030.1); Has 13396 Blast hits to 13370 proteins in 3710 species: Archae - 270; Bacteria - 5735; Metazoa - 2292; Fungi - 281; Plants - 265; Viruses - 0; Other Eukaryotes - 4553 (source: NCBI BLink). & (p42895|eno2_maize : 782.0) Enolase 2 (EC 4.2.1.11) (2-phosphoglycerate dehydratase 2) (2-phospho-D-glycerate hydro-lyase 2) - Zea mays (Maize) & (gnl|cdd|37881 : 713.0) no description available & (gnl|cdd|48188 : 682.0) no description available & (reliability: 1584.0) & (original description: Putative PGH1, Description = Enolase, PFAM = PF00113;PF03952)' T '4.1.13' 'glycolysis.cytosolic branch.enolase' 'niben101scf07672_35307-45298' '(at2g29560 : 790.0) Encodes a putative phosphoenolpyruvate enolase that is localized both to the nucleus and the cytoplasm.; cytosolic enolase (ENOC); FUNCTIONS IN: phosphopyruvate hydratase activity, magnesium ion binding; INVOLVED IN: glycolysis; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Enolase (InterPro:IPR000941), Enolase, C-terminal (InterPro:IPR020810), Enolase, conserved site (InterPro:IPR020809), Enolase, N-terminal (InterPro:IPR020811); BEST Arabidopsis thaliana protein match is: Enolase (TAIR:AT2G36530.1); Has 13178 Blast hits to 13156 proteins in 3650 species: Archae - 272; Bacteria - 5726; Metazoa - 2098; Fungi - 281; Plants - 257; Viruses - 0; Other Eukaryotes - 4544 (source: NCBI BLink). & (gnl|cdd|37881 : 654.0) no description available & (gnl|cdd|48188 : 597.0) no description available & (p42896|eno_ricco : 508.0) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) - Ricinus communis (Castor bean) & (reliability: 1580.0) & (original description: Putative ENO3, Description = Cytosolic enolase 3, PFAM = PF00113;PF03952)' T '4.1.13' 'glycolysis.cytosolic branch.enolase' 'niben101scf10384_319701-335243' '(at2g29560 : 793.0) Encodes a putative phosphoenolpyruvate enolase that is localized both to the nucleus and the cytoplasm.; cytosolic enolase (ENOC); FUNCTIONS IN: phosphopyruvate hydratase activity, magnesium ion binding; INVOLVED IN: glycolysis; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Enolase (InterPro:IPR000941), Enolase, C-terminal (InterPro:IPR020810), Enolase, conserved site (InterPro:IPR020809), Enolase, N-terminal (InterPro:IPR020811); BEST Arabidopsis thaliana protein match is: Enolase (TAIR:AT2G36530.1); Has 13178 Blast hits to 13156 proteins in 3650 species: Archae - 272; Bacteria - 5726; Metazoa - 2098; Fungi - 281; Plants - 257; Viruses - 0; Other Eukaryotes - 4544 (source: NCBI BLink). & (gnl|cdd|37881 : 653.0) no description available & (gnl|cdd|48188 : 604.0) no description available & (p42896|eno_ricco : 504.0) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) - Ricinus communis (Castor bean) & (reliability: 1586.0) & (original description: Putative ENO3, Description = Cytosolic enolase 3, PFAM = PF00113;PF03952)' T '4.1.13' 'glycolysis.cytosolic branch.enolase' 'niben101scf11341_1011-7309' '(at1g74030 : 792.0) Encodes the plastid-localized phosphoenolpyruvate enolase. Mutant plants have abnormal trichomes.; enolase 1 (ENO1); FUNCTIONS IN: phosphopyruvate hydratase activity; INVOLVED IN: trichome morphogenesis; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enolase (InterPro:IPR000941), Enolase, C-terminal (InterPro:IPR020810), Enolase, conserved site (InterPro:IPR020809), Enolase, N-terminal (InterPro:IPR020811); BEST Arabidopsis thaliana protein match is: Enolase (TAIR:AT2G36530.1); Has 13710 Blast hits to 13689 proteins in 3755 species: Archae - 283; Bacteria - 5826; Metazoa - 2303; Fungi - 284; Plants - 460; Viruses - 0; Other Eukaryotes - 4554 (source: NCBI BLink). & (gnl|cdd|37881 : 704.0) no description available & (gnl|cdd|48188 : 655.0) no description available & (q43130|eno_mescr : 593.0) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 1584.0) & (original description: Putative ENO1, Description = Enolase 1, chloroplastic, PFAM = PF03952;PF00113)' T '4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'nbv0.3scaffold19941_416-4060' '(q42954|kpyc_tobac : 279.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Nicotiana tabacum (Common tobacco) & (at5g56350 : 253.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT4G26390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37534 : 188.0) no description available & (gnl|cdd|29370 : 184.0) no description available & (reliability: 498.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF00224)' T '4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'nbv0.3scaffold41034_6635-17947' '(at3g52990 : 904.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, magnesium ion binding, potassium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: membrane; EXPRESSED IN: guard cell, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT2G36580.1); Has 9560 Blast hits to 9533 proteins in 2700 species: Archae - 164; Bacteria - 5966; Metazoa - 522; Fungi - 215; Plants - 538; Viruses - 0; Other Eukaryotes - 2155 (source: NCBI BLink). & (gnl|cdd|37534 : 497.0) no description available & (gnl|cdd|29370 : 385.0) no description available & (q42806|kpyc_soybn : 383.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Glycine max (Soybean) & (reliability: 1808.0) & (original description: Putative PK5, Description = Pyruvate kinase, PFAM = PF02887;PF00224)' T '4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'niben044scf00008250ctg000_3268-9784' '(at3g49160 : 709.0) Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.; pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, magnesium ion binding, potassium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT5G63680.1); Has 14581 Blast hits to 9515 proteins in 2692 species: Archae - 258; Bacteria - 9751; Metazoa - 816; Fungi - 346; Plants - 707; Viruses - 0; Other Eukaryotes - 2703 (source: NCBI BLink). & (gnl|cdd|82521 : 522.0) no description available & (gnl|cdd|37534 : 130.0) no description available & (p55964|kpyg_ricco : 95.5) Pyruvate kinase isozyme G, chloroplast (EC 2.7.1.40) (Fragment) - Ricinus communis (Castor bean) & (reliability: 1418.0) & (original description: Putative PKP4, Description = Plastidial pyruvate kinase 4, chloroplastic, PFAM = PF00224;PF00224)' T '4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'niben044scf00034083ctg004_13492-16997' '(q42954|kpyc_tobac : 279.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Nicotiana tabacum (Common tobacco) & (at5g56350 : 252.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT4G26390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37534 : 188.0) no description available & (gnl|cdd|29370 : 184.0) no description available & (reliability: 496.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF00224)' T '4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'niben101scf00155_431837-439798' '(q42954|kpyc_tobac : 958.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Nicotiana tabacum (Common tobacco) & (at5g56350 : 851.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT4G26390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37534 : 632.0) no description available & (gnl|cdd|29370 : 621.0) no description available & (reliability: 1626.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF00224;PF02887)' T '4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'niben101scf00417_60515-70440' '(at3g52990 : 937.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, magnesium ion binding, potassium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: membrane; EXPRESSED IN: guard cell, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT2G36580.1); Has 9560 Blast hits to 9533 proteins in 2700 species: Archae - 164; Bacteria - 5966; Metazoa - 522; Fungi - 215; Plants - 538; Viruses - 0; Other Eukaryotes - 2155 (source: NCBI BLink). & (gnl|cdd|37534 : 508.0) no description available & (gnl|cdd|29370 : 392.0) no description available & (q42806|kpyc_soybn : 378.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Glycine max (Soybean) & (reliability: 1874.0) & (original description: Putative pk3, Description = Pyruvate kinase, PFAM = PF02887;PF00224)' T '4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'niben101scf01273_50626-58643' '(q42806|kpyc_soybn : 886.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Glycine max (Soybean) & (at5g08570 : 847.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT5G63680.1); Has 10268 Blast hits to 10160 proteins in 2717 species: Archae - 168; Bacteria - 6093; Metazoa - 541; Fungi - 219; Plants - 538; Viruses - 0; Other Eukaryotes - 2709 (source: NCBI BLink). & (gnl|cdd|29370 : 643.0) no description available & (gnl|cdd|37534 : 623.0) no description available & (reliability: 1694.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF02887;PF00224)' T '4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'niben101scf01966_185221-191626' '(at3g49160 : 711.0) Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.; pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, magnesium ion binding, potassium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT5G63680.1); Has 14581 Blast hits to 9515 proteins in 2692 species: Archae - 258; Bacteria - 9751; Metazoa - 816; Fungi - 346; Plants - 707; Viruses - 0; Other Eukaryotes - 2703 (source: NCBI BLink). & (gnl|cdd|82521 : 518.0) no description available & (gnl|cdd|37534 : 130.0) no description available & (p55964|kpyg_ricco : 95.9) Pyruvate kinase isozyme G, chloroplast (EC 2.7.1.40) (Fragment) - Ricinus communis (Castor bean) & (reliability: 1422.0) & (original description: Putative PKP4, Description = Plastidial pyruvate kinase 4, chloroplastic, PFAM = PF00224;PF00224)' T '4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'niben101scf02502_1642603-1650602' '(at3g52990 : 952.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, magnesium ion binding, potassium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: membrane; EXPRESSED IN: guard cell, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT2G36580.1); Has 9560 Blast hits to 9533 proteins in 2700 species: Archae - 164; Bacteria - 5966; Metazoa - 522; Fungi - 215; Plants - 538; Viruses - 0; Other Eukaryotes - 2155 (source: NCBI BLink). & (gnl|cdd|37534 : 515.0) no description available & (gnl|cdd|29370 : 395.0) no description available & (q42806|kpyc_soybn : 379.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Glycine max (Soybean) & (reliability: 1904.0) & (original description: Putative pk3, Description = Pyruvate kinase, PFAM = PF00224;PF02887)' T '4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'niben101scf02622_968223-992700' '(at3g52990 : 897.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, magnesium ion binding, potassium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: membrane; EXPRESSED IN: guard cell, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT2G36580.1); Has 9560 Blast hits to 9533 proteins in 2700 species: Archae - 164; Bacteria - 5966; Metazoa - 522; Fungi - 215; Plants - 538; Viruses - 0; Other Eukaryotes - 2155 (source: NCBI BLink). & (gnl|cdd|37534 : 490.0) no description available & (q42806|kpyc_soybn : 382.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Glycine max (Soybean) & (gnl|cdd|29370 : 381.0) no description available & (reliability: 1794.0) & (original description: Putative pk3, Description = Pyruvate kinase, PFAM = PF02887;PF00224)' T '4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'niben101scf02913_18713-24773' '(p22200|kpyc_soltu : 915.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Solanum tuberosum (Potato) & (at5g08570 : 857.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT5G63680.1); Has 10268 Blast hits to 10160 proteins in 2717 species: Archae - 168; Bacteria - 6093; Metazoa - 541; Fungi - 219; Plants - 538; Viruses - 0; Other Eukaryotes - 2709 (source: NCBI BLink). & (gnl|cdd|29370 : 651.0) no description available & (gnl|cdd|37534 : 629.0) no description available & (reliability: 1714.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF00224;PF02887)' T '4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'niben101scf03732_812717-820986' '(at3g52990 : 948.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, magnesium ion binding, potassium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: membrane; EXPRESSED IN: guard cell, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT2G36580.1); Has 9560 Blast hits to 9533 proteins in 2700 species: Archae - 164; Bacteria - 5966; Metazoa - 522; Fungi - 215; Plants - 538; Viruses - 0; Other Eukaryotes - 2155 (source: NCBI BLink). & (gnl|cdd|37534 : 509.0) no description available & (gnl|cdd|29370 : 386.0) no description available & (q42954|kpyc_tobac : 375.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Nicotiana tabacum (Common tobacco) & (reliability: 1896.0) & (original description: Putative pyk2, Description = Pyruvate kinase, PFAM = PF02887;PF00224)' T '4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'niben101scf04292_1180122-1186435' '(q42954|kpyc_tobac : 964.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Nicotiana tabacum (Common tobacco) & (at5g56350 : 856.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT4G26390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37534 : 634.0) no description available & (gnl|cdd|29370 : 622.0) no description available & (reliability: 1632.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF00224;PF02887)' T '4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'niben101scf12653_215769-228147' '(q42806|kpyc_soybn : 876.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Glycine max (Soybean) & (at5g08570 : 843.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT5G63680.1); Has 10268 Blast hits to 10160 proteins in 2717 species: Archae - 168; Bacteria - 6093; Metazoa - 541; Fungi - 219; Plants - 538; Viruses - 0; Other Eukaryotes - 2709 (source: NCBI BLink). & (gnl|cdd|29370 : 638.0) no description available & (gnl|cdd|37534 : 617.0) no description available & (reliability: 1686.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF02887;PF00224)' T '4.1.15' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase (PEPC)' 'nbv0.3scaffold24120_21262-29518' '(p27154|capp_tobac : 1791.0) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase) (PEPC) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|64189 : 1650.0) no description available & (at3g14940 : 1612.0) Encodes a cytosolic phosphoenolpyruvate carboxylase (PEPC) that has activity when expressed in E.coli. Its mRNA is most abundantly expressed in roots and siliques. PPC3 belongs to the plant-type PEPC family. It can form an enzymatically active complex with a castor bean ortholog of PPC4, which encodes a bacterial-type PEPC.; phosphoenolpyruvate carboxylase 3 (PPC3); FUNCTIONS IN: phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 6864 Blast hits to 6805 proteins in 1910 species: Archae - 27; Bacteria - 2657; Metazoa - 5; Fungi - 0; Plants - 1758; Viruses - 0; Other Eukaryotes - 2417 (source: NCBI BLink). & (reliability: 3224.0) & (original description: Putative PPC, Description = Phosphoenolpyruvate carboxylase, PFAM = PF00311)' T '4.1.15' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase (PEPC)' 'nbv0.5scaffold2529_290307-306867' '(at1g68750 : 1560.0) Encodes one of four Arabidopsis phosphoenolpyruvate (PEP) carboxylase proteins. But, it is more similar to bacterial PEP carboxylase than plant PEP carboxylase. Efforts to express this enzyme and to demonstrate its enzymatic activity in E.coli failed.; phosphoenolpyruvate carboxylase 4 (PPC4); CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 9944 Blast hits to 6686 proteins in 1878 species: Archae - 54; Bacteria - 5038; Metazoa - 4; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 2994 (source: NCBI BLink). & (gnl|cdd|80444 : 749.0) no description available & (q6r2v6|capp2_chlre : 655.0) Phosphoenolpyruvate carboxylase 2 (EC 4.1.1.31) (PEP carboxylase 2) (PEPCase 2) (PEPC 2) - Chlamydomonas reinhardtii & (reliability: 3120.0) & (original description: Putative ppc3, Description = Phosphoenolpyruvate carboxylase protein, PFAM = PF00311;PF00311)' T '4.1.15' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase (PEPC)' 'niben101scf00031_46039-54455' '(p27154|capp_tobac : 1757.0) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase) (PEPC) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|64189 : 1731.0) no description available & (at3g14940 : 1729.0) Encodes a cytosolic phosphoenolpyruvate carboxylase (PEPC) that has activity when expressed in E.coli. Its mRNA is most abundantly expressed in roots and siliques. PPC3 belongs to the plant-type PEPC family. It can form an enzymatically active complex with a castor bean ortholog of PPC4, which encodes a bacterial-type PEPC.; phosphoenolpyruvate carboxylase 3 (PPC3); FUNCTIONS IN: phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 6864 Blast hits to 6805 proteins in 1910 species: Archae - 27; Bacteria - 2657; Metazoa - 5; Fungi - 0; Plants - 1758; Viruses - 0; Other Eukaryotes - 2417 (source: NCBI BLink). & (reliability: 3458.0) & (original description: Putative PPC, Description = Phosphoenolpyruvate carboxylase, PFAM = PF00311)' T '4.1.15' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase (PEPC)' 'niben101scf00312_285696-297984' '(at1g68750 : 1558.0) Encodes one of four Arabidopsis phosphoenolpyruvate (PEP) carboxylase proteins. But, it is more similar to bacterial PEP carboxylase than plant PEP carboxylase. Efforts to express this enzyme and to demonstrate its enzymatic activity in E.coli failed.; phosphoenolpyruvate carboxylase 4 (PPC4); CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 9944 Blast hits to 6686 proteins in 1878 species: Archae - 54; Bacteria - 5038; Metazoa - 4; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 2994 (source: NCBI BLink). & (gnl|cdd|80444 : 748.0) no description available & (q6r2v6|capp2_chlre : 656.0) Phosphoenolpyruvate carboxylase 2 (EC 4.1.1.31) (PEP carboxylase 2) (PEPCase 2) (PEPC 2) - Chlamydomonas reinhardtii & (reliability: 3116.0) & (original description: Putative ppc3, Description = Phosphoenolpyruvate carboxylase protein, PFAM = PF00311;PF00311)' T '4.1.15' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase (PEPC)' 'niben101scf03439_360247-368745' '(p27154|capp_tobac : 1829.0) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase) (PEPC) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|64189 : 1682.0) no description available & (at3g14940 : 1648.0) Encodes a cytosolic phosphoenolpyruvate carboxylase (PEPC) that has activity when expressed in E.coli. Its mRNA is most abundantly expressed in roots and siliques. PPC3 belongs to the plant-type PEPC family. It can form an enzymatically active complex with a castor bean ortholog of PPC4, which encodes a bacterial-type PEPC.; phosphoenolpyruvate carboxylase 3 (PPC3); FUNCTIONS IN: phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 6864 Blast hits to 6805 proteins in 1910 species: Archae - 27; Bacteria - 2657; Metazoa - 5; Fungi - 0; Plants - 1758; Viruses - 0; Other Eukaryotes - 2417 (source: NCBI BLink). & (reliability: 3296.0) & (original description: Putative PPC, Description = Phosphoenolpyruvate carboxylase, PFAM = PF00311)' T '4.1.15' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase (PEPC)' 'niben101scf03487_89754-93707' '(gnl|cdd|64189 : 803.0) no description available & (at1g53310 : 790.0) Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.; phosphoenolpyruvate carboxylase 1 (PPC1); FUNCTIONS IN: protein binding, phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol, apoplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 3 (TAIR:AT3G14940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q02909|capp1_soybn : 786.0) Phosphoenolpyruvate carboxylase, housekeeping isozyme (EC 4.1.1.31) (PEPCase) (PEPC 1) - Glycine max (Soybean) & (reliability: 1580.0) & (original description: Putative p107, Description = Phosphoenolpyruvate carboxylase, PFAM = PF00311)' T '4.1.15' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase (PEPC)' 'niben101scf03628_1545942-1555543' '(gnl|cdd|64189 : 1724.0) no description available & (q02909|capp1_soybn : 1712.0) Phosphoenolpyruvate carboxylase, housekeeping isozyme (EC 4.1.1.31) (PEPCase) (PEPC 1) - Glycine max (Soybean) & (at1g53310 : 1706.0) Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.; phosphoenolpyruvate carboxylase 1 (PPC1); FUNCTIONS IN: protein binding, phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol, apoplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 3 (TAIR:AT3G14940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 3412.0) & (original description: Putative ppc2, Description = Phosphoenolpyruvate carboxylase 1, PFAM = PF00311)' T '4.1.15' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase (PEPC)' 'niben101scf04036_421300-428955' '(p27154|capp_tobac : 1894.0) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase) (PEPC) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|64189 : 1742.0) no description available & (at3g14940 : 1708.0) Encodes a cytosolic phosphoenolpyruvate carboxylase (PEPC) that has activity when expressed in E.coli. Its mRNA is most abundantly expressed in roots and siliques. PPC3 belongs to the plant-type PEPC family. It can form an enzymatically active complex with a castor bean ortholog of PPC4, which encodes a bacterial-type PEPC.; phosphoenolpyruvate carboxylase 3 (PPC3); FUNCTIONS IN: phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 6864 Blast hits to 6805 proteins in 1910 species: Archae - 27; Bacteria - 2657; Metazoa - 5; Fungi - 0; Plants - 1758; Viruses - 0; Other Eukaryotes - 2417 (source: NCBI BLink). & (reliability: 3416.0) & (original description: Putative PPC, Description = Phosphoenolpyruvate carboxylase, PFAM = PF00311)' T '4.1.15' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase (PEPC)' 'niben101scf07352_1-5800' '(p29196|capp_soltu : 707.0) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase) (PEPC) - Solanum tuberosum (Potato) & (gnl|cdd|64189 : 695.0) no description available & (at3g14940 : 689.0) Encodes a cytosolic phosphoenolpyruvate carboxylase (PEPC) that has activity when expressed in E.coli. Its mRNA is most abundantly expressed in roots and siliques. PPC3 belongs to the plant-type PEPC family. It can form an enzymatically active complex with a castor bean ortholog of PPC4, which encodes a bacterial-type PEPC.; phosphoenolpyruvate carboxylase 3 (PPC3); FUNCTIONS IN: phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 6864 Blast hits to 6805 proteins in 1910 species: Archae - 27; Bacteria - 2657; Metazoa - 5; Fungi - 0; Plants - 1758; Viruses - 0; Other Eukaryotes - 2417 (source: NCBI BLink). & (reliability: 1378.0) & (original description: Putative pepC, Description = Phosphoenolpyruvate carboxylase, PFAM = PF00311)' T '4.1.15' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase (PEPC)' 'niben101scf08191_229960-233537' '(gnl|cdd|64189 : 804.0) no description available & (p29196|capp_soltu : 781.0) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase) (PEPC) - Solanum tuberosum (Potato) & (at1g53310 : 751.0) Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.; phosphoenolpyruvate carboxylase 1 (PPC1); FUNCTIONS IN: protein binding, phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol, apoplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 3 (TAIR:AT3G14940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1502.0) & (original description: Putative p107, Description = Phosphoenolpyruvate carboxylase, PFAM = PF00311)' T '4.1.15' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase (PEPC)' 'niben101scf25430_50582-59088' '(p29196|capp_soltu : 1820.0) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase) (PEPC) - Solanum tuberosum (Potato) & (gnl|cdd|64189 : 1772.0) no description available & (at1g53310 : 1714.0) Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.; phosphoenolpyruvate carboxylase 1 (PPC1); FUNCTIONS IN: protein binding, phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol, apoplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 3 (TAIR:AT3G14940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 3428.0) & (original description: Putative PPC1, Description = Phosphoenolpyruvate carboxylase, PFAM = PF00311)' T '4.1.16' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK)' 'nbv0.5scaffold230_923267-929026' '(at1g12680 : 428.0) phosphoenolpyruvate carboxylase-related kinase 2 (PEPKR2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 29 (TAIR:AT1G76040.2); Has 127165 Blast hits to 125151 proteins in 3799 species: Archae - 184; Bacteria - 15080; Metazoa - 45775; Fungi - 13042; Plants - 31031; Viruses - 550; Other Eukaryotes - 21503 (source: NCBI BLink). & (gnl|cdd|35255 : 260.0) no description available & (gnl|cdd|29142 : 255.0) no description available & (p28582|cdpk_dauca : 227.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 856.0) & (original description: Putative Sb07g023380, Description = Putative uncharacterized protein Sb07g023380, PFAM = PF00069)' T '4.1.16' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK)' 'nbv0.5scaffold1878_352007-358074' '(at1g08650 : 300.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 268.0) no description available & (gnl|cdd|29142 : 264.0) no description available & (p28583|cdpk_soybn : 210.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (reliability: 600.0) & (original description: Putative PPCK1, Description = Phosphoenolpyruvate carboxylase kinase 1, PFAM = PF00069)' T '4.1.16' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK)' 'niben044scf00012054ctg004_1-2993' '(at1g08650 : 323.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 286.0) no description available & (gnl|cdd|29142 : 268.0) no description available & (p49101|cdpk2_maize : 241.0) Calcium-dependent protein kinase 2 (EC 2.7.11.1) (CDPK 2) - Zea mays (Maize) & (reliability: 646.0) & (original description: Putative PPCK1, Description = Phosphoenolpyruvate carboxylase kinase 1, PFAM = PF00069)' T '4.1.16' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK)' 'niben044scf00061397ctg001_3372-6586' '(at1g08650 : 324.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 292.0) no description available & (gnl|cdd|29142 : 275.0) no description available & (p28582|cdpk_dauca : 247.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 648.0) & (original description: Putative PPCK1, Description = Phosphoenolpyruvate carboxylase kinase 1, PFAM = PF00069)' T '4.1.16' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK)' 'niben101scf01005_184054-190114' '(at1g12680 : 484.0) phosphoenolpyruvate carboxylase-related kinase 2 (PEPKR2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 29 (TAIR:AT1G76040.2); Has 127165 Blast hits to 125151 proteins in 3799 species: Archae - 184; Bacteria - 15080; Metazoa - 45775; Fungi - 13042; Plants - 31031; Viruses - 550; Other Eukaryotes - 21503 (source: NCBI BLink). & (gnl|cdd|35255 : 273.0) no description available & (gnl|cdd|29142 : 270.0) no description available & (p28583|cdpk_soybn : 226.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (reliability: 968.0) & (original description: Putative cdpk1, Description = Calcium-dependent protein kinase, PFAM = PF00069)' T '4.1.16' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK)' 'niben101scf01724_121392-127592' '(at1g12680 : 497.0) phosphoenolpyruvate carboxylase-related kinase 2 (PEPKR2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 29 (TAIR:AT1G76040.2); Has 127165 Blast hits to 125151 proteins in 3799 species: Archae - 184; Bacteria - 15080; Metazoa - 45775; Fungi - 13042; Plants - 31031; Viruses - 550; Other Eukaryotes - 21503 (source: NCBI BLink). & (gnl|cdd|35255 : 279.0) no description available & (gnl|cdd|29142 : 275.0) no description available & (p28583|cdpk_soybn : 243.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (reliability: 994.0) & (original description: Putative PEPKR2, Description = Serine/threonine-protein kinase PEPKR2, PFAM = PF00069)' T '4.1.16' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK)' 'niben101scf02724_653688-658357' '(at3g04530 : 304.0) Encodes a second Arabidopsis phosphoenolpyruvate carboxylase kinase gene product with a different expression pattern from PPCK1. Expression of the gene is upregulated by exposure of the plant to light.; phosphoenolpyruvate carboxylase kinase 2 (PPCK2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 1 (TAIR:AT1G08650.1); Has 120539 Blast hits to 118552 proteins in 3545 species: Archae - 165; Bacteria - 14785; Metazoa - 43114; Fungi - 13204; Plants - 27915; Viruses - 518; Other Eukaryotes - 20838 (source: NCBI BLink). & (gnl|cdd|35255 : 284.0) no description available & (gnl|cdd|29142 : 269.0) no description available & (p28582|cdpk_dauca : 258.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 596.0) & (original description: Putative PPCK2, Description = Phosphoenolpyruvate carboxylase kinase 2, PFAM = PF00069)' T '4.1.16' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK)' 'niben101scf04332_43218-46140' '(at1g08650 : 325.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 287.0) no description available & (gnl|cdd|29142 : 270.0) no description available & (p28582|cdpk_dauca : 241.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 650.0) & (original description: Putative SNIK, Description = Phosphoenolpyruvate carboxylase-kinase, PFAM = PF00069)' T '4.1.16' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK)' 'niben101scf04332_268696-271608' '(at1g08650 : 318.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 286.0) no description available & (gnl|cdd|29142 : 277.0) no description available & (p28582|cdpk_dauca : 253.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 636.0) & (original description: Putative PpcK4, Description = Phosphoenolpyruvate carboxylase kinase 4, PFAM = PF00069)' T '4.1.16' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK)' 'niben101scf04882_37028-39955' '(at1g08650 : 328.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 292.0) no description available & (gnl|cdd|29142 : 274.0) no description available & (p28582|cdpk_dauca : 246.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 656.0) & (original description: Putative PPCK1, Description = Phosphoenolpyruvate carboxylase kinase 1, PFAM = PF00069)' T '4.1.16' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK)' 'niben101scf05552_1065150-1069664' '(at1g12580 : 539.0) phosphoenolpyruvate carboxylase-related kinase 1 (PEPKR1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 34 (TAIR:AT5G19360.1); Has 122716 Blast hits to 120722 proteins in 3168 species: Archae - 154; Bacteria - 14954; Metazoa - 44101; Fungi - 12932; Plants - 28847; Viruses - 523; Other Eukaryotes - 21205 (source: NCBI BLink). & (gnl|cdd|35255 : 318.0) no description available & (p53684|cdpk3_orysa : 286.0) Calcium-dependent protein kinase, isoform 11 (EC 2.7.11.1) (CDPK 11) - Oryza sativa (Rice) & (gnl|cdd|29142 : 284.0) no description available & (reliability: 1078.0) & (original description: Putative PEPKR1, Description = Phosphoenolpyruvate carboxylase-related kinase 1, PFAM = PF00069)' T '4.1.16' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK)' 'niben101scf05680_135654-143478' '(at1g12680 : 489.0) phosphoenolpyruvate carboxylase-related kinase 2 (PEPKR2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 29 (TAIR:AT1G76040.2); Has 127165 Blast hits to 125151 proteins in 3799 species: Archae - 184; Bacteria - 15080; Metazoa - 45775; Fungi - 13042; Plants - 31031; Viruses - 550; Other Eukaryotes - 21503 (source: NCBI BLink). & (gnl|cdd|35255 : 274.0) no description available & (gnl|cdd|29142 : 268.0) no description available & (p53684|cdpk3_orysa : 231.0) Calcium-dependent protein kinase, isoform 11 (EC 2.7.11.1) (CDPK 11) - Oryza sativa (Rice) & (reliability: 978.0) & (original description: Putative PEPKR2, Description = Serine/threonine-protein kinase PEPKR2, PFAM = PF00069)' T '4.1.16' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK)' 'niben101scf14945_96516-100392' '(at1g08650 : 300.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 278.0) no description available & (gnl|cdd|29142 : 272.0) no description available & (p28582|cdpk_dauca : 228.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 600.0) & (original description: Putative PPCK1, Description = Phosphoenolpyruvate carboxylase kinase 1, PFAM = PF00069)' T '4.2' 'glycolysis.plastid branch' '' '' '4.2.1' 'glycolysis.plastid branch.UGPase' '' '' '4.2.2' 'glycolysis.plastid branch.phosphoglucomutase (PGM)' 'nbv0.3scaffold861_635-21422' '(q9m4g5|pgmp_soltu : 1059.0) Phosphoglucomutase, chloroplast precursor (EC 5.4.2.2) (Glucose phosphomutase) (PGM) - Solanum tuberosum (Potato) & (at5g51820 : 1006.0) Encodes a plastid isoform of the enzyme phosphoglucomutase involved in controlling photosynthetic carbon flow. Effective petiole movement against the direction of the gravity requires functional PGM activity that is required for full development of amyloplasts.; phosphoglucomutase (PGM); FUNCTIONS IN: phosphoglucomutase activity; INVOLVED IN: response to cold, starch biosynthetic process, detection of gravity, carbohydrate metabolic process; LOCATED IN: apoplast, stromule, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G70730.3); Has 12307 Blast hits to 12296 proteins in 2800 species: Archae - 231; Bacteria - 9586; Metazoa - 483; Fungi - 211; Plants - 168; Viruses - 0; Other Eukaryotes - 1628 (source: NCBI BLink). & (gnl|cdd|35844 : 864.0) no description available & (gnl|cdd|82275 : 507.0) no description available & (reliability: 2012.0) & (original description: Putative PGMP, Description = Phosphoglucomutase, chloroplastic, PFAM = PF02880;PF02879;PF00408;PF02878)' T '4.2.2' 'glycolysis.plastid branch.phosphoglucomutase (PGM)' 'niben044scf00030425ctg001_1-8970' '(at5g17530 : 493.0) phosphoglucosamine mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: phosphoglucomutase, putative / glucose phosphomutase, putative (TAIR:AT1G70820.1). & (gnl|cdd|36434 : 273.0) no description available & (gnl|cdd|31306 : 120.0) no description available & (reliability: 986.0) & (original description: Putative pgm, Description = Phosphoglucomutase, PFAM = PF02880;PF02879)' T '4.2.2' 'glycolysis.plastid branch.phosphoglucomutase (PGM)' 'niben101scf00714_27969-64139' '(at5g17530 : 870.0) phosphoglucosamine mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: phosphoglucomutase, putative / glucose phosphomutase, putative (TAIR:AT1G70820.1). & (gnl|cdd|36434 : 453.0) no description available & (gnl|cdd|31306 : 233.0) no description available & (reliability: 1740.0) & (original description: Putative algC, Description = Phosphomannomutase/phosphoglucomutase, PFAM = PF02879;PF02878;PF02880)' T '4.2.2' 'glycolysis.plastid branch.phosphoglucomutase (PGM)' 'niben101scf01582_790150-810310' '(at1g70820 : 920.0) phosphoglucomutase, putative / glucose phosphomutase, putative; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: phosphoglucosamine mutase family protein (TAIR:AT5G17530.2); Has 16953 Blast hits to 16952 proteins in 2734 species: Archae - 435; Bacteria - 11347; Metazoa - 78; Fungi - 46; Plants - 64; Viruses - 0; Other Eukaryotes - 4983 (source: NCBI BLink). & (gnl|cdd|36434 : 500.0) no description available & (gnl|cdd|31306 : 216.0) no description available & (reliability: 1840.0) & (original description: Putative pgm, Description = Phosphoglucomutase, PFAM = PF02880;PF02878;PF02879)' T '4.2.2' 'glycolysis.plastid branch.phosphoglucomutase (PGM)' 'niben101scf05552_41759-44473' '(q9m4g5|pgmp_soltu : 130.0) Phosphoglucomutase, chloroplast precursor (EC 5.4.2.2) (Glucose phosphomutase) (PGM) - Solanum tuberosum (Potato) & (at5g51820 : 112.0) Encodes a plastid isoform of the enzyme phosphoglucomutase involved in controlling photosynthetic carbon flow. Effective petiole movement against the direction of the gravity requires functional PGM activity that is required for full development of amyloplasts.; phosphoglucomutase (PGM); FUNCTIONS IN: phosphoglucomutase activity; INVOLVED IN: response to cold, starch biosynthetic process, detection of gravity, carbohydrate metabolic process; LOCATED IN: apoplast, stromule, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G70730.3); Has 12307 Blast hits to 12296 proteins in 2800 species: Archae - 231; Bacteria - 9586; Metazoa - 483; Fungi - 211; Plants - 168; Viruses - 0; Other Eukaryotes - 1628 (source: NCBI BLink). & (gnl|cdd|35844 : 100.0) no description available & (reliability: 224.0) & (original description: Putative pgm, Description = Phosphoglucomutase, PFAM = PF02878)' T '4.2.3' 'glycolysis.plastid branch.glucose-6-phosphate isomerase' 'niben044scf00025267ctg003_39992-48418' '(at4g24620 : 1004.0) The PGI1 gene encodes the plastid phospho-glucose (Glc) isomerase. While pgi1-1 mutant has a deficiency in leaf starch synthesis, it accumulates starch in root cap cells. Flowering time of the pgi1-1 mutant is significantly delayed under short-day conditions.; phosphoglucose isomerase 1 (PGI1); FUNCTIONS IN: glucose-6-phosphate isomerase activity; INVOLVED IN: positive regulation of flower development, starch metabolic process; LOCATED IN: cytosol, chloroplast, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglucose isomerase, conserved site (InterPro:IPR018189), Phosphoglucose isomerase (PGI) (InterPro:IPR001672); BEST Arabidopsis thaliana protein match is: Sugar isomerase (SIS) family protein (TAIR:AT5G42740.1); Has 10976 Blast hits to 10974 proteins in 3405 species: Archae - 60; Bacteria - 6731; Metazoa - 613; Fungi - 158; Plants - 999; Viruses - 0; Other Eukaryotes - 2415 (source: NCBI BLink). & (gnl|cdd|37657 : 552.0) no description available & (gnl|cdd|80564 : 509.0) no description available & (p42862|g6pia_orysa : 155.0) Glucose-6-phosphate isomerase, cytosolic A (EC 5.3.1.9) (GPI-A) (Phosphoglucose isomerase A) (PGI-A) (Phosphohexose isomerase A) (PHI-A) - Oryza sativa (Rice) & (reliability: 2008.0) & (original description: Putative PGI1, Description = Glucose-6-phosphate isomerase 1, chloroplastic, PFAM = PF00342;PF00342)' T '4.2.3' 'glycolysis.plastid branch.glucose-6-phosphate isomerase' 'niben101scf02659_93824-102508' '(at4g24620 : 1010.0) The PGI1 gene encodes the plastid phospho-glucose (Glc) isomerase. While pgi1-1 mutant has a deficiency in leaf starch synthesis, it accumulates starch in root cap cells. Flowering time of the pgi1-1 mutant is significantly delayed under short-day conditions.; phosphoglucose isomerase 1 (PGI1); FUNCTIONS IN: glucose-6-phosphate isomerase activity; INVOLVED IN: positive regulation of flower development, starch metabolic process; LOCATED IN: cytosol, chloroplast, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglucose isomerase, conserved site (InterPro:IPR018189), Phosphoglucose isomerase (PGI) (InterPro:IPR001672); BEST Arabidopsis thaliana protein match is: Sugar isomerase (SIS) family protein (TAIR:AT5G42740.1); Has 10976 Blast hits to 10974 proteins in 3405 species: Archae - 60; Bacteria - 6731; Metazoa - 613; Fungi - 158; Plants - 999; Viruses - 0; Other Eukaryotes - 2415 (source: NCBI BLink). & (gnl|cdd|37657 : 556.0) no description available & (gnl|cdd|80564 : 514.0) no description available & (p42862|g6pia_orysa : 158.0) Glucose-6-phosphate isomerase, cytosolic A (EC 5.3.1.9) (GPI-A) (Phosphoglucose isomerase A) (PGI-A) (Phosphohexose isomerase A) (PHI-A) - Oryza sativa (Rice) & (reliability: 2020.0) & (original description: Putative PGI1, Description = Glucose-6-phosphate isomerase 1, chloroplastic, PFAM = PF00342;PF00342)' T '4.2.3' 'glycolysis.plastid branch.glucose-6-phosphate isomerase' 'niben101scf14282_70887-79347' '(at4g24620 : 1007.0) The PGI1 gene encodes the plastid phospho-glucose (Glc) isomerase. While pgi1-1 mutant has a deficiency in leaf starch synthesis, it accumulates starch in root cap cells. Flowering time of the pgi1-1 mutant is significantly delayed under short-day conditions.; phosphoglucose isomerase 1 (PGI1); FUNCTIONS IN: glucose-6-phosphate isomerase activity; INVOLVED IN: positive regulation of flower development, starch metabolic process; LOCATED IN: cytosol, chloroplast, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglucose isomerase, conserved site (InterPro:IPR018189), Phosphoglucose isomerase (PGI) (InterPro:IPR001672); BEST Arabidopsis thaliana protein match is: Sugar isomerase (SIS) family protein (TAIR:AT5G42740.1); Has 10976 Blast hits to 10974 proteins in 3405 species: Archae - 60; Bacteria - 6731; Metazoa - 613; Fungi - 158; Plants - 999; Viruses - 0; Other Eukaryotes - 2415 (source: NCBI BLink). & (gnl|cdd|37657 : 560.0) no description available & (gnl|cdd|80564 : 510.0) no description available & (p42862|g6pia_orysa : 155.0) Glucose-6-phosphate isomerase, cytosolic A (EC 5.3.1.9) (GPI-A) (Phosphoglucose isomerase A) (PGI-A) (Phosphohexose isomerase A) (PHI-A) - Oryza sativa (Rice) & (reliability: 2014.0) & (original description: Putative pgi, Description = Glucose-6-phosphate isomerase, PFAM = PF00342;PF00342)' T '4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'nbv0.3scaffold59360_1-11357' '(at2g22480 : 860.0) phosphofructokinase 5 (PFK5); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 4 (TAIR:AT5G61580.1); Has 7923 Blast hits to 7389 proteins in 2127 species: Archae - 28; Bacteria - 5127; Metazoa - 660; Fungi - 395; Plants - 392; Viruses - 2; Other Eukaryotes - 1319 (source: NCBI BLink). & (gnl|cdd|82016 : 475.0) no description available & (gnl|cdd|37651 : 381.0) no description available & (reliability: 1720.0) & (original description: Putative PFK5, Description = ATP-dependent 6-phosphofructokinase 5, chloroplastic, PFAM = PF00365)' T '4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'nbv0.3scaffold64791_1579-10332' '(at5g61580 : 441.0) phosphofructokinase 4 (PFK4); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 3 (TAIR:AT4G26270.1); Has 7879 Blast hits to 7460 proteins in 2153 species: Archae - 28; Bacteria - 5246; Metazoa - 634; Fungi - 293; Plants - 391; Viruses - 4; Other Eukaryotes - 1283 (source: NCBI BLink). & (gnl|cdd|82016 : 277.0) no description available & (gnl|cdd|37651 : 270.0) no description available & (reliability: 882.0) & (original description: Putative 6PFK, Description = ATP-PFK, PFAM = PF00365)' T '4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'nbv0.5scaffold2370_477998-498686' '(at5g61580 : 808.0) phosphofructokinase 4 (PFK4); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 3 (TAIR:AT4G26270.1); Has 7879 Blast hits to 7460 proteins in 2153 species: Archae - 28; Bacteria - 5246; Metazoa - 634; Fungi - 293; Plants - 391; Viruses - 4; Other Eukaryotes - 1283 (source: NCBI BLink). & (gnl|cdd|82016 : 465.0) no description available & (gnl|cdd|37651 : 460.0) no description available & (reliability: 1616.0) & (original description: Putative PFK4, Description = ATP-dependent 6-phosphofructokinase 4, chloroplastic, PFAM = PF00365)' T '4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'nbv0.5scaffold9558_4534-9778' '(at4g26270 : 389.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82016 : 287.0) no description available & (gnl|cdd|37651 : 277.0) no description available & (reliability: 768.0) & (original description: Putative PFK, Description = Phosphofructokinase, PFAM = PF00365)' T '4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'nbv0.5scaffold9558_5031-15050' '(at4g26270 : 765.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 501.0) no description available & (gnl|cdd|82016 : 485.0) no description available & (reliability: 1476.0) & (original description: Putative PFK3, Description = ATP-dependent 6-phosphofructokinase 3, PFAM = PF00365)' T '4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'niben044scf00003407ctg004_1-4846' '(at4g26270 : 194.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 124.0) no description available & (gnl|cdd|82016 : 104.0) no description available & (reliability: 354.0) & (original description: Putative PFK, Description = ATP-PFK, PFAM = )' T '4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'niben044scf00003407ctg005_1-6951' '(at4g26270 : 559.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82016 : 377.0) no description available & (gnl|cdd|37651 : 340.0) no description available & (reliability: 1090.0) & (original description: Putative 6PFK, Description = 6-phosphofructokinase, PFAM = PF00365)' T '4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'niben044scf00038302ctg001_1-11879' '(at2g22480 : 856.0) phosphofructokinase 5 (PFK5); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 4 (TAIR:AT5G61580.1); Has 7923 Blast hits to 7389 proteins in 2127 species: Archae - 28; Bacteria - 5127; Metazoa - 660; Fungi - 395; Plants - 392; Viruses - 2; Other Eukaryotes - 1319 (source: NCBI BLink). & (gnl|cdd|82016 : 467.0) no description available & (gnl|cdd|37651 : 375.0) no description available & (reliability: 1712.0) & (original description: Putative PFK5, Description = ATP-dependent 6-phosphofructokinase 5, chloroplastic, PFAM = PF00365)' T '4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'niben044scf00048745ctg000_27412-32795' '(at5g61580 : 334.0) phosphofructokinase 4 (PFK4); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 3 (TAIR:AT4G26270.1); Has 7879 Blast hits to 7460 proteins in 2153 species: Archae - 28; Bacteria - 5246; Metazoa - 634; Fungi - 293; Plants - 391; Viruses - 4; Other Eukaryotes - 1283 (source: NCBI BLink). & (gnl|cdd|82016 : 198.0) no description available & (gnl|cdd|37651 : 176.0) no description available & (reliability: 668.0) & (original description: Putative PFK, Description = ATP-PFK, PFAM = )' T '4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'niben101scf00163_2288521-2303794' '(at5g61580 : 804.0) phosphofructokinase 4 (PFK4); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 3 (TAIR:AT4G26270.1); Has 7879 Blast hits to 7460 proteins in 2153 species: Archae - 28; Bacteria - 5246; Metazoa - 634; Fungi - 293; Plants - 391; Viruses - 4; Other Eukaryotes - 1283 (source: NCBI BLink). & (gnl|cdd|82016 : 467.0) no description available & (gnl|cdd|37651 : 461.0) no description available & (reliability: 1608.0) & (original description: Putative PFK4, Description = ATP-dependent 6-phosphofructokinase 4, chloroplastic, PFAM = PF00365)' T '4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'niben101scf01153_23974-30831' '(at4g26270 : 784.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82016 : 487.0) no description available & (gnl|cdd|37651 : 482.0) no description available & (reliability: 1558.0) & (original description: Putative PFK3, Description = ATP-dependent 6-phosphofructokinase 3, PFAM = PF00365)' T '4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'niben101scf01235_136231-146313' '(at4g26270 : 727.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 470.0) no description available & (gnl|cdd|82016 : 455.0) no description available & (reliability: 1404.0) & (original description: Putative PFK, Description = ATP-dependent 6-phosphofructokinase, PFAM = PF00365)' T '4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'niben101scf02217_336449-350038' '(at4g26270 : 387.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82016 : 284.0) no description available & (gnl|cdd|37651 : 276.0) no description available & (reliability: 762.0) & (original description: Putative PFK, Description = Phosphofructokinase, PFAM = PF00365)' T '4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'niben101scf02217_336568-359429' '(at4g26270 : 758.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 498.0) no description available & (gnl|cdd|82016 : 481.0) no description available & (reliability: 1462.0) & (original description: Putative PFK3, Description = ATP-dependent 6-phosphofructokinase 3, PFAM = PF00365)' T '4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'niben101scf04950_440031-453318' '(at2g22480 : 848.0) phosphofructokinase 5 (PFK5); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 4 (TAIR:AT5G61580.1); Has 7923 Blast hits to 7389 proteins in 2127 species: Archae - 28; Bacteria - 5127; Metazoa - 660; Fungi - 395; Plants - 392; Viruses - 2; Other Eukaryotes - 1319 (source: NCBI BLink). & (gnl|cdd|82016 : 474.0) no description available & (gnl|cdd|37651 : 382.0) no description available & (reliability: 1696.0) & (original description: Putative PFK5, Description = ATP-dependent 6-phosphofructokinase 5, chloroplastic, PFAM = PF00365)' T '4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'niben101scf06698_32044-51234' '(at4g26270 : 754.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 493.0) no description available & (gnl|cdd|82016 : 486.0) no description available & (reliability: 1432.0) & (original description: Putative PFK3, Description = ATP-dependent 6-phosphofructokinase 3, PFAM = PF00365)' T '4.2.5' 'glycolysis.plastid branch.pyrophosphate-fructose-6-P phosphotransferase' '' '' '4.2.6' 'glycolysis.plastid branch.fructose-2,6-bisphosphatase (Fru2,6BisPase)' '' '' '4.2.7' 'glycolysis.plastid branch.triosephosphate isomerase (TPI)' '' '' '4.2.8' 'glycolysis.plastid branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'nbv0.3scaffold67674_2454-9382' '(at1g16300 : 554.0) Encodes one of the chloroplast/plastid localized GAPDH isoforms (GAPCp1/At1g79530 and GAPCp2/At1g16300). gapcp double mutants display a drastic phenotype of arrested root development, dwarfism and sterility. GAPCps are important for the synthesis of serine in roots.; glyceraldehyde-3-phosphate dehydrogenase of plastid 2 (GAPCP-2); CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase of plastid 1 (TAIR:AT1G79530.1); Has 25238 Blast hits to 25227 proteins in 6343 species: Archae - 51; Bacteria - 10898; Metazoa - 2382; Fungi - 2852; Plants - 3834; Viruses - 0; Other Eukaryotes - 5221 (source: NCBI BLink). & (gnl|cdd|30406 : 464.0) no description available & (p09094|g3pc_tobac : 421.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) (Fragment) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35876 : 392.0) no description available & (reliability: 1108.0) & (original description: Putative GAPCP2, Description = Glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic, PFAM = PF02800;PF00044)' T '4.2.8' 'glycolysis.plastid branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'niben101scf12280_166522-173858' '(at1g16300 : 488.0) Encodes one of the chloroplast/plastid localized GAPDH isoforms (GAPCp1/At1g79530 and GAPCp2/At1g16300). gapcp double mutants display a drastic phenotype of arrested root development, dwarfism and sterility. GAPCps are important for the synthesis of serine in roots.; glyceraldehyde-3-phosphate dehydrogenase of plastid 2 (GAPCP-2); CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase of plastid 1 (TAIR:AT1G79530.1); Has 25238 Blast hits to 25227 proteins in 6343 species: Archae - 51; Bacteria - 10898; Metazoa - 2382; Fungi - 2852; Plants - 3834; Viruses - 0; Other Eukaryotes - 5221 (source: NCBI BLink). & (gnl|cdd|30406 : 419.0) no description available & (p34924|g3pc_pinsy : 374.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) - Pinus sylvestris (Scots pine) & (gnl|cdd|35876 : 362.0) no description available & (reliability: 976.0) & (original description: Putative gap, Description = Glyceraldehyde-3-phosphate dehydrogenase, PFAM = PF00044;PF02800)' T '4.2.11' 'glycolysis.plastid branch.3-phosphoglycerate kinase (PGK)' '' '' '4.2.12' 'glycolysis.plastid branch.phosphoglycerate mutase' 'niben044scf00002185ctg002_2906-7286' '(at1g22170 : 387.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, catalytic activity; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Phosphoglycerate mutase 1 (InterPro:IPR005952); BEST Arabidopsis thaliana protein match is: phosphoglycerate/bisphosphoglycerate mutase (TAIR:AT1G78050.1); Has 12525 Blast hits to 12398 proteins in 2288 species: Archae - 62; Bacteria - 8805; Metazoa - 605; Fungi - 308; Plants - 169; Viruses - 0; Other Eukaryotes - 2576 (source: NCBI BLink). & (gnl|cdd|73912 : 299.0) no description available & (gnl|cdd|35456 : 197.0) no description available & (reliability: 774.0) & (original description: Putative gpmA, Description = 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, PFAM = PF00300;PF00300)' T '4.2.12' 'glycolysis.plastid branch.phosphoglycerate mutase' 'niben044scf00002185ctg002_2960-7187' '(at1g22170 : 377.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, catalytic activity; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Phosphoglycerate mutase 1 (InterPro:IPR005952); BEST Arabidopsis thaliana protein match is: phosphoglycerate/bisphosphoglycerate mutase (TAIR:AT1G78050.1); Has 12525 Blast hits to 12398 proteins in 2288 species: Archae - 62; Bacteria - 8805; Metazoa - 605; Fungi - 308; Plants - 169; Viruses - 0; Other Eukaryotes - 2576 (source: NCBI BLink). & (gnl|cdd|73912 : 296.0) no description available & (gnl|cdd|35456 : 196.0) no description available & (reliability: 754.0) & (original description: Putative gpmA, Description = 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, PFAM = PF00300;PF00300)' T '4.2.12' 'glycolysis.plastid branch.phosphoglycerate mutase' 'niben101scf06375_229031-241691' '(at1g22170 : 471.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, catalytic activity; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Phosphoglycerate mutase 1 (InterPro:IPR005952); BEST Arabidopsis thaliana protein match is: phosphoglycerate/bisphosphoglycerate mutase (TAIR:AT1G78050.1); Has 12525 Blast hits to 12398 proteins in 2288 species: Archae - 62; Bacteria - 8805; Metazoa - 605; Fungi - 308; Plants - 169; Viruses - 0; Other Eukaryotes - 2576 (source: NCBI BLink). & (gnl|cdd|73912 : 312.0) no description available & (gnl|cdd|35456 : 219.0) no description available & (reliability: 942.0) & (original description: Putative gpmA, Description = 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, PFAM = PF00300;PF00300)' T '4.2.12' 'glycolysis.plastid branch.phosphoglycerate mutase' 'niben101scf13679_130740-140185' '(at1g22170 : 394.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, catalytic activity; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Phosphoglycerate mutase 1 (InterPro:IPR005952); BEST Arabidopsis thaliana protein match is: phosphoglycerate/bisphosphoglycerate mutase (TAIR:AT1G78050.1); Has 12525 Blast hits to 12398 proteins in 2288 species: Archae - 62; Bacteria - 8805; Metazoa - 605; Fungi - 308; Plants - 169; Viruses - 0; Other Eukaryotes - 2576 (source: NCBI BLink). & (gnl|cdd|73912 : 296.0) no description available & (gnl|cdd|35456 : 195.0) no description available & (reliability: 788.0) & (original description: Putative gpmA, Description = 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, PFAM = PF00300;PF00300)' T '4.2.13' 'glycolysis.plastid branch.enolase' '' '' '4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'nbv0.3scaffold19941_416-4060' '(q42954|kpyc_tobac : 279.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Nicotiana tabacum (Common tobacco) & (at5g56350 : 253.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT4G26390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37534 : 188.0) no description available & (gnl|cdd|29370 : 184.0) no description available & (reliability: 506.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF00224)' T '4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'nbv0.3scaffold42673_12923-18186' '(q43117|kpya_ricco : 517.0) Pyruvate kinase isozyme A, chloroplast precursor (EC 2.7.1.40) - Ricinus communis (Castor bean) & (at3g22960 : 516.0) encodes a chloroplast pyruvate kinase alpha subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds.; PKP-ALPHA; FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: response to cadmium ion, glycolysis, lipid metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidic pyruvate kinase beta subunit 1 (TAIR:AT5G52920.1); Has 10289 Blast hits to 10239 proteins in 2715 species: Archae - 167; Bacteria - 6049; Metazoa - 538; Fungi - 221; Plants - 529; Viruses - 0; Other Eukaryotes - 2785 (source: NCBI BLink). & (gnl|cdd|30817 : 349.0) no description available & (gnl|cdd|37534 : 307.0) no description available & (reliability: 1032.0) & (original description: Putative TIDP3692, Description = Pyruvate kinase, PFAM = PF00224;PF00224;PF02887)' T '4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'nbv0.5scaffold1798_269840-283271' '(q40545|kpya_tobac : 1113.0) Pyruvate kinase isozyme A, chloroplast precursor (EC 2.7.1.40) - Nicotiana tabacum (Common tobacco) & (at3g22960 : 873.0) encodes a chloroplast pyruvate kinase alpha subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds.; PKP-ALPHA; FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: response to cadmium ion, glycolysis, lipid metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidic pyruvate kinase beta subunit 1 (TAIR:AT5G52920.1); Has 10289 Blast hits to 10239 proteins in 2715 species: Archae - 167; Bacteria - 6049; Metazoa - 538; Fungi - 221; Plants - 529; Viruses - 0; Other Eukaryotes - 2785 (source: NCBI BLink). & (gnl|cdd|30817 : 397.0) no description available & (gnl|cdd|37534 : 341.0) no description available & (reliability: 1746.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF02887;PF00224)' T '4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'nbv0.5scaffold7048_73368-76992' '(q40545|kpya_tobac : 417.0) Pyruvate kinase isozyme A, chloroplast precursor (EC 2.7.1.40) - Nicotiana tabacum (Common tobacco) & (at3g22960 : 387.0) encodes a chloroplast pyruvate kinase alpha subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds.; PKP-ALPHA; FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: response to cadmium ion, glycolysis, lipid metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidic pyruvate kinase beta subunit 1 (TAIR:AT5G52920.1); Has 10289 Blast hits to 10239 proteins in 2715 species: Archae - 167; Bacteria - 6049; Metazoa - 538; Fungi - 221; Plants - 529; Viruses - 0; Other Eukaryotes - 2785 (source: NCBI BLink). & (gnl|cdd|30817 : 192.0) no description available & (gnl|cdd|37534 : 151.0) no description available & (reliability: 774.0) & (original description: Putative E592, Description = Pyruvate kinase, PFAM = PF02887;PF00224)' T '4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'niben044scf00016971ctg003_12106-20056' '(q40545|kpya_tobac : 870.0) Pyruvate kinase isozyme A, chloroplast precursor (EC 2.7.1.40) - Nicotiana tabacum (Common tobacco) & (at3g22960 : 809.0) encodes a chloroplast pyruvate kinase alpha subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds.; PKP-ALPHA; FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: response to cadmium ion, glycolysis, lipid metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidic pyruvate kinase beta subunit 1 (TAIR:AT5G52920.1); Has 10289 Blast hits to 10239 proteins in 2715 species: Archae - 167; Bacteria - 6049; Metazoa - 538; Fungi - 221; Plants - 529; Viruses - 0; Other Eukaryotes - 2785 (source: NCBI BLink). & (gnl|cdd|30817 : 370.0) no description available & (gnl|cdd|37534 : 311.0) no description available & (reliability: 1618.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF02887;PF00224;PF00224)' T '4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'niben044scf00020080ctg003_475-4451' '(q43117|kpya_ricco : 470.0) Pyruvate kinase isozyme A, chloroplast precursor (EC 2.7.1.40) - Ricinus communis (Castor bean) & (at3g22960 : 461.0) encodes a chloroplast pyruvate kinase alpha subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds.; PKP-ALPHA; FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: response to cadmium ion, glycolysis, lipid metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidic pyruvate kinase beta subunit 1 (TAIR:AT5G52920.1); Has 10289 Blast hits to 10239 proteins in 2715 species: Archae - 167; Bacteria - 6049; Metazoa - 538; Fungi - 221; Plants - 529; Viruses - 0; Other Eukaryotes - 2785 (source: NCBI BLink). & (gnl|cdd|30817 : 305.0) no description available & (gnl|cdd|37534 : 262.0) no description available & (reliability: 922.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF00224;PF02887)' T '4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'niben044scf00034083ctg004_13492-16997' '(q42954|kpyc_tobac : 279.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Nicotiana tabacum (Common tobacco) & (at5g56350 : 252.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT4G26390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37534 : 188.0) no description available & (gnl|cdd|29370 : 184.0) no description available & (reliability: 504.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF00224)' T '4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'niben101scf00155_431837-439798' '(q42954|kpyc_tobac : 958.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Nicotiana tabacum (Common tobacco) & (at5g56350 : 851.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT4G26390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37534 : 632.0) no description available & (gnl|cdd|29370 : 621.0) no description available & (reliability: 1702.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF00224;PF02887)' T '4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'niben101scf00276_790989-803005' '(q40546|kpyg_tobac : 998.0) Pyruvate kinase isozyme G, chloroplast precursor (EC 2.7.1.40) - Nicotiana tabacum (Common tobacco) & (at1g32440 : 758.0) encodes a chloroplast pyruvate kinase beta subunit. The enzyme is less active than the other chloroplast pyruvate kinase beta subunit encoded by AT5G52920. Involved in seed oil biosynthesis. Can partially complement the AT5G52920 mutant.; plastidial pyruvate kinase 3 (PKp3); FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: glycolysis, fatty acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidic pyruvate kinase beta subunit 1 (TAIR:AT5G52920.1); Has 10210 Blast hits to 10148 proteins in 2685 species: Archae - 173; Bacteria - 5966; Metazoa - 531; Fungi - 219; Plants - 532; Viruses - 0; Other Eukaryotes - 2789 (source: NCBI BLink). & (gnl|cdd|37534 : 506.0) no description available & (gnl|cdd|30817 : 464.0) no description available & (reliability: 1516.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF00224;PF02887)' T '4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'niben101scf04292_1180122-1186435' '(q42954|kpyc_tobac : 964.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Nicotiana tabacum (Common tobacco) & (at5g56350 : 856.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT4G26390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37534 : 634.0) no description available & (gnl|cdd|29370 : 622.0) no description available & (reliability: 1712.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF00224;PF02887)' T '4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'niben101scf05381_400543-413467' '(q40545|kpya_tobac : 1105.0) Pyruvate kinase isozyme A, chloroplast precursor (EC 2.7.1.40) - Nicotiana tabacum (Common tobacco) & (at3g22960 : 879.0) encodes a chloroplast pyruvate kinase alpha subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds.; PKP-ALPHA; FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: response to cadmium ion, glycolysis, lipid metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidic pyruvate kinase beta subunit 1 (TAIR:AT5G52920.1); Has 10289 Blast hits to 10239 proteins in 2715 species: Archae - 167; Bacteria - 6049; Metazoa - 538; Fungi - 221; Plants - 529; Viruses - 0; Other Eukaryotes - 2785 (source: NCBI BLink). & (gnl|cdd|30817 : 399.0) no description available & (gnl|cdd|37534 : 342.0) no description available & (reliability: 1758.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF02887;PF00224)' T '4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'niben101scf05710_363589-369226' '(q43117|kpya_ricco : 593.0) Pyruvate kinase isozyme A, chloroplast precursor (EC 2.7.1.40) - Ricinus communis (Castor bean) & (at3g22960 : 589.0) encodes a chloroplast pyruvate kinase alpha subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds.; PKP-ALPHA; FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: response to cadmium ion, glycolysis, lipid metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidic pyruvate kinase beta subunit 1 (TAIR:AT5G52920.1); Has 10289 Blast hits to 10239 proteins in 2715 species: Archae - 167; Bacteria - 6049; Metazoa - 538; Fungi - 221; Plants - 529; Viruses - 0; Other Eukaryotes - 2785 (source: NCBI BLink). & (gnl|cdd|30817 : 383.0) no description available & (gnl|cdd|37534 : 339.0) no description available & (reliability: 1178.0) & (original description: Putative PK6, Description = Pyruvate kinase, PFAM = PF00224;PF02887)' T '4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'niben101scf06684_344827-354906' '(at5g52920 : 950.0) encodes a dominant chloroplast pyruvate kinase beta subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds. The mutant plant has wrinkled seeds, with a 50-70% reduction in seed fatty acid content.; plastidic pyruvate kinase beta subunit 1 (PKP-BETA1); FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: response to cadmium ion, glycolysis, seed development, fatty acid biosynthetic process, lipid metabolic process; LOCATED IN: mitochondrion, chloroplast, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidial pyruvate kinase 3 (TAIR:AT1G32440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q40546|kpyg_tobac : 746.0) Pyruvate kinase isozyme G, chloroplast precursor (EC 2.7.1.40) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|37534 : 534.0) no description available & (gnl|cdd|81761 : 477.0) no description available & (reliability: 1900.0) & (original description: Putative PKP2, Description = Plastidial pyruvate kinase 2, PFAM = PF02887;PF00224)' T '4.2.14' 'glycolysis.plastid branch.pyruvate kinase (PK)' 'niben101scf08737_26741-34774' '(q40545|kpya_tobac : 963.0) Pyruvate kinase isozyme A, chloroplast precursor (EC 2.7.1.40) - Nicotiana tabacum (Common tobacco) & (at3g22960 : 873.0) encodes a chloroplast pyruvate kinase alpha subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds.; PKP-ALPHA; FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: response to cadmium ion, glycolysis, lipid metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidic pyruvate kinase beta subunit 1 (TAIR:AT5G52920.1); Has 10289 Blast hits to 10239 proteins in 2715 species: Archae - 167; Bacteria - 6049; Metazoa - 538; Fungi - 221; Plants - 529; Viruses - 0; Other Eukaryotes - 2785 (source: NCBI BLink). & (gnl|cdd|30817 : 398.0) no description available & (gnl|cdd|37534 : 339.0) no description available & (reliability: 1746.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF02887;PF00224)' T '4.2.15' 'glycolysis.plastid branch.phospho-enol-pyruvate carboxylase (PEPC)' '' '' '4.3' 'glycolysis.unclear/dually targeted' '' '' '4.3.1' 'glycolysis.unclear/dually targeted.UGPase' '' '' '4.3.2' 'glycolysis.unclear/dually targeted.phosphoglucomutase (PGM)' '' '' '4.3.3' 'glycolysis.unclear/dually targeted.glucose-6-phosphate isomerase' '' '' '4.3.4' 'glycolysis.unclear/dually targeted.phosphofructokinase (PFK)' 'nbv0.5scaffold9558_4534-9778' '(at4g26270 : 389.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82016 : 287.0) no description available & (gnl|cdd|37651 : 277.0) no description available & (reliability: 776.0) & (original description: Putative PFK, Description = Phosphofructokinase, PFAM = PF00365)' T '4.3.4' 'glycolysis.unclear/dually targeted.phosphofructokinase (PFK)' 'nbv0.5scaffold9558_5031-15050' '(at4g26270 : 765.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 501.0) no description available & (gnl|cdd|82016 : 485.0) no description available & (reliability: 1500.0) & (original description: Putative PFK3, Description = ATP-dependent 6-phosphofructokinase 3, PFAM = PF00365)' T '4.3.4' 'glycolysis.unclear/dually targeted.phosphofructokinase (PFK)' 'niben044scf00003407ctg004_1-4846' '(at4g26270 : 194.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 124.0) no description available & (gnl|cdd|82016 : 104.0) no description available & (reliability: 388.0) & (original description: Putative PFK, Description = ATP-PFK, PFAM = )' T '4.3.4' 'glycolysis.unclear/dually targeted.phosphofructokinase (PFK)' 'niben044scf00003407ctg005_1-6951' '(at4g26270 : 559.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82016 : 377.0) no description available & (gnl|cdd|37651 : 340.0) no description available & (reliability: 1094.0) & (original description: Putative 6PFK, Description = 6-phosphofructokinase, PFAM = PF00365)' T '4.3.4' 'glycolysis.unclear/dually targeted.phosphofructokinase (PFK)' 'niben101scf01153_23974-30831' '(at4g26270 : 784.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82016 : 487.0) no description available & (gnl|cdd|37651 : 482.0) no description available & (reliability: 1544.0) & (original description: Putative PFK3, Description = ATP-dependent 6-phosphofructokinase 3, PFAM = PF00365)' T '4.3.4' 'glycolysis.unclear/dually targeted.phosphofructokinase (PFK)' 'niben101scf01235_136231-146313' '(at4g26270 : 727.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 470.0) no description available & (gnl|cdd|82016 : 455.0) no description available & (reliability: 1428.0) & (original description: Putative PFK, Description = ATP-dependent 6-phosphofructokinase, PFAM = PF00365)' T '4.3.4' 'glycolysis.unclear/dually targeted.phosphofructokinase (PFK)' 'niben101scf02217_336449-350038' '(at4g26270 : 387.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82016 : 284.0) no description available & (gnl|cdd|37651 : 276.0) no description available & (reliability: 772.0) & (original description: Putative PFK, Description = Phosphofructokinase, PFAM = PF00365)' T '4.3.4' 'glycolysis.unclear/dually targeted.phosphofructokinase (PFK)' 'niben101scf02217_336568-359429' '(at4g26270 : 758.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 498.0) no description available & (gnl|cdd|82016 : 481.0) no description available & (reliability: 1486.0) & (original description: Putative PFK3, Description = ATP-dependent 6-phosphofructokinase 3, PFAM = PF00365)' T '4.3.4' 'glycolysis.unclear/dually targeted.phosphofructokinase (PFK)' 'niben101scf06698_32044-51234' '(at4g26270 : 754.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37651 : 493.0) no description available & (gnl|cdd|82016 : 486.0) no description available & (reliability: 1486.0) & (original description: Putative PFK3, Description = ATP-dependent 6-phosphofructokinase 3, PFAM = PF00365)' T '4.3.5' 'glycolysis.unclear/dually targeted.pyrophosphate-fructose-6-P phosphotransferase' '' '' '4.3.6' 'glycolysis.unclear/dually targeted.fructose-2,6-bisphosphatase (Fru2,6BisPase)' '' '' '4.3.7' 'glycolysis.unclear/dually targeted.triosephosphate isomerase (TPI)' '' '' '4.3.8' 'glycolysis.unclear/dually targeted.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' '' '' '4.3.9' 'glycolysis.unclear/dually targeted.non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NPGAP-DH)' '' '' '4.3.10' 'glycolysis.unclear/dually targeted.aldolase' 'niben044scf00050323ctg000_12010-18482' '(gnl|cdd|84661 : 611.0) no description available & (p17784|alf_orysa : 600.0) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) & (at2g36460 : 597.0) Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to salt stress, pentose-phosphate shunt; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT3G52930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36770 : 586.0) no description available & (reliability: 1170.0) & (original description: Putative alf, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T '4.3.10' 'glycolysis.unclear/dually targeted.aldolase' 'niben101scf00302_116509-123697' '(gnl|cdd|84661 : 614.0) no description available & (p17784|alf_orysa : 603.0) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) & (at2g36460 : 599.0) Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to salt stress, pentose-phosphate shunt; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT3G52930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36770 : 588.0) no description available & (reliability: 1176.0) & (original description: Putative alf, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T '4.3.10' 'glycolysis.unclear/dually targeted.aldolase' 'niben101scf03580_286138-289953' '(gnl|cdd|84661 : 615.0) no description available & (at2g36460 : 604.0) Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to salt stress, pentose-phosphate shunt; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT3G52930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p17784|alf_orysa : 602.0) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) & (gnl|cdd|36770 : 592.0) no description available & (reliability: 1180.0) & (original description: Putative fba, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T '4.3.10' 'glycolysis.unclear/dually targeted.aldolase' 'niben101scf09014_104627-108475' '(gnl|cdd|84661 : 617.0) no description available & (at2g36460 : 607.0) Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to salt stress, pentose-phosphate shunt; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT3G52930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p17784|alf_orysa : 602.0) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) & (gnl|cdd|36770 : 595.0) no description available & (reliability: 1186.0) & (original description: Putative alf, Description = Fructose-bisphosphate aldolase, PFAM = PF00274)' T '4.3.11' 'glycolysis.unclear/dually targeted.3-phosphoglycerate kinase (PGK)' '' '' '4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'nbv0.5scaffold13_1633414-1642939' '(at5g22620 : 562.0) phosphoglycerate/bisphosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G50520.1). & (gnl|cdd|30755 : 143.0) no description available & (gnl|cdd|35456 : 129.0) no description available & (reliability: 1124.0) & (original description: Putative c1pp, Description = 2-carboxy-D-arabinitol 1-phosphate (CA1P) phosphatase, PFAM = PF00300;PF00300)' T '4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'nbv0.5scaffold180_292288-301515' '(at3g05170 : 421.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|30755 : 93.0) no description available & (reliability: 842.0) & (original description: Putative At3g05170, Description = Phosphoglycerate mutase-like protein AT74, PFAM = PF00300)' T '4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'nbv0.5scaffold1122_633875-637673' '(at3g05170 : 201.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative At1g08940, Description = Phosphoglycerate/bisphosphoglycerate mutase family protein, PFAM = )' T '4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben044scf00002185ctg002_2906-7286' '(at1g22170 : 387.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, catalytic activity; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Phosphoglycerate mutase 1 (InterPro:IPR005952); BEST Arabidopsis thaliana protein match is: phosphoglycerate/bisphosphoglycerate mutase (TAIR:AT1G78050.1); Has 12525 Blast hits to 12398 proteins in 2288 species: Archae - 62; Bacteria - 8805; Metazoa - 605; Fungi - 308; Plants - 169; Viruses - 0; Other Eukaryotes - 2576 (source: NCBI BLink). & (gnl|cdd|73912 : 299.0) no description available & (gnl|cdd|35456 : 197.0) no description available & (reliability: 728.0) & (original description: Putative gpmA, Description = 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, PFAM = PF00300;PF00300)' T '4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben044scf00002185ctg002_2960-7187' '(at1g22170 : 377.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, catalytic activity; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Phosphoglycerate mutase 1 (InterPro:IPR005952); BEST Arabidopsis thaliana protein match is: phosphoglycerate/bisphosphoglycerate mutase (TAIR:AT1G78050.1); Has 12525 Blast hits to 12398 proteins in 2288 species: Archae - 62; Bacteria - 8805; Metazoa - 605; Fungi - 308; Plants - 169; Viruses - 0; Other Eukaryotes - 2576 (source: NCBI BLink). & (gnl|cdd|73912 : 296.0) no description available & (gnl|cdd|35456 : 196.0) no description available & (reliability: 714.0) & (original description: Putative gpmA, Description = 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, PFAM = PF00300;PF00300)' T '4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben044scf00002827ctg001_1-3508' '(at3g05170 : 202.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative At1g08940, Description = Phosphoglycerate/bisphosphoglycerate mutase family protein, PFAM = )' T '4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben044scf00002827ctg002_1-2000' '(at3g05170 : 228.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|84677 : 82.1) no description available & (reliability: 456.0) & (original description: Putative DET1, Description = Phosphoglycerate mutase, PFAM = PF00300)' T '4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben044scf00006981ctg008_2005-11620' '(at3g05170 : 286.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|84677 : 99.4) no description available & (reliability: 572.0) & (original description: Putative At3g05170, Description = Phosphoglycerate mutase-like protein AT74, PFAM = PF00300)' T '4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben044scf00015114ctg004_1-3129' '(at3g50520 : 202.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT5G04120.1); Has 16927 Blast hits to 16736 proteins in 2503 species: Archae - 87; Bacteria - 12791; Metazoa - 870; Fungi - 486; Plants - 272; Viruses - 0; Other Eukaryotes - 2421 (source: NCBI BLink). & (gnl|cdd|35456 : 111.0) no description available & (gnl|cdd|30755 : 86.0) no description available & (reliability: 404.0) & (original description: Putative IPSP, Description = Hypothetical_protein, PFAM = PF00300)' T '4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben044scf00019447ctg004_1-5200' '(at5g22620 : 179.0) phosphoglycerate/bisphosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G50520.1). & (gnl|cdd|30755 : 133.0) no description available & (gnl|cdd|35456 : 106.0) no description available & (reliability: 358.0) & (original description: Putative c1pp, Description = Phosphoglycerate mutase, putative, PFAM = PF00300)' T '4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben044scf00021228ctg009_10537-13654' '(at3g05170 : 232.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|84677 : 81.7) no description available & (reliability: 464.0) & (original description: Putative PGSC0003DMG401028569, Description = Phosphoglycerate mutase, PFAM = PF00300)' T '4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben044scf00060234ctg000_1-1703' '(at1g08940 : 160.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G05170.1); Has 1152 Blast hits to 1140 proteins in 473 species: Archae - 9; Bacteria - 736; Metazoa - 2; Fungi - 189; Plants - 85; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative PGSC0003DMG401028570, Description = Phosphoglycerate/bisphosphoglycerate mutase family protein, PFAM = PF00300)' T '4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben101scf00616_212464-216944' '(at3g05170 : 238.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|84677 : 87.9) no description available & (reliability: 476.0) & (original description: Putative At1g08940, Description = Phosphoglycerate mutase-like protein AT74H, PFAM = PF00300)' T '4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben101scf00963_297720-307687' '(at1g08940 : 160.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G05170.1); Has 1152 Blast hits to 1140 proteins in 473 species: Archae - 9; Bacteria - 736; Metazoa - 2; Fungi - 189; Plants - 85; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative PGSC0003DMG401028570, Description = Phosphoglycerate/bisphosphoglycerate mutase family protein, PFAM = PF00300)' T '4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben101scf03222_423092-425524' '(at3g05170 : 150.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative At1g08940, Description = At1g08940, PFAM = PF00300)' T '4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben101scf04015_56537-61526' '(at3g05170 : 399.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|84677 : 94.8) no description available & (reliability: 798.0) & (original description: Putative At1g08940, Description = Phosphoglycerate mutase-like protein AT74H, PFAM = PF00300)' T '4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben101scf04015_94661-99064' '(at3g05170 : 273.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|84677 : 90.2) no description available & (reliability: 546.0) & (original description: Putative PGSC0003DMG401028570, Description = Phosphoglycerate/bisphosphoglycerate mutase family protein, PFAM = PF00300)' T '4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben101scf04899_274145-280712' '(at5g22620 : 176.0) phosphoglycerate/bisphosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G50520.1). & (gnl|cdd|30755 : 126.0) no description available & (gnl|cdd|35456 : 103.0) no description available & (reliability: 352.0) & (original description: Putative c1pp, Description = Os01g0237100 protein, PFAM = PF00300)' T '4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben101scf05813_866259-876706' '(at3g50520 : 292.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT5G04120.1); Has 16927 Blast hits to 16736 proteins in 2503 species: Archae - 87; Bacteria - 12791; Metazoa - 870; Fungi - 486; Plants - 272; Viruses - 0; Other Eukaryotes - 2421 (source: NCBI BLink). & (gnl|cdd|35456 : 175.0) no description available & (gnl|cdd|30755 : 157.0) no description available & (reliability: 584.0) & (original description: Putative At3g50520, Description = Phosphoglycerate mutase-like protein 4, PFAM = PF00300)' T '4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben101scf06375_229031-241691' '(at1g22170 : 471.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, catalytic activity; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Phosphoglycerate mutase 1 (InterPro:IPR005952); BEST Arabidopsis thaliana protein match is: phosphoglycerate/bisphosphoglycerate mutase (TAIR:AT1G78050.1); Has 12525 Blast hits to 12398 proteins in 2288 species: Archae - 62; Bacteria - 8805; Metazoa - 605; Fungi - 308; Plants - 169; Viruses - 0; Other Eukaryotes - 2576 (source: NCBI BLink). & (gnl|cdd|73912 : 312.0) no description available & (gnl|cdd|35456 : 219.0) no description available & (reliability: 860.0) & (original description: Putative gpmA, Description = 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, PFAM = PF00300;PF00300)' T '4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben101scf06866_137141-144014' '(at3g05170 : 422.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|84677 : 94.1) no description available & (reliability: 844.0) & (original description: Putative At3g05170, Description = Phosphoglycerate mutase-like protein AT74, PFAM = PF00300)' T '4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'niben101scf13679_130740-140185' '(at1g22170 : 394.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, catalytic activity; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Phosphoglycerate mutase 1 (InterPro:IPR005952); BEST Arabidopsis thaliana protein match is: phosphoglycerate/bisphosphoglycerate mutase (TAIR:AT1G78050.1); Has 12525 Blast hits to 12398 proteins in 2288 species: Archae - 62; Bacteria - 8805; Metazoa - 605; Fungi - 308; Plants - 169; Viruses - 0; Other Eukaryotes - 2576 (source: NCBI BLink). & (gnl|cdd|73912 : 296.0) no description available & (gnl|cdd|35456 : 195.0) no description available & (reliability: 736.0) & (original description: Putative gpmA, Description = 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, PFAM = PF00300;PF00300)' T '4.3.13' 'glycolysis.unclear/dually targeted.enolase' '' '' '4.3.14' 'glycolysis.unclear/dually targeted.pyruvate kinase (PK)' '' '' '4.3.15' 'glycolysis.unclear/dually targeted.phospho-enol-pyruvate carboxylase (PEPC)' '' '' '4.3.16' 'glycolysis.unclear/dually targeted.phospho-enol-pyruvate carboxylase kinase (PEPCK)' 'nbv0.5scaffold1878_352007-358074' '(at1g08650 : 300.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 268.0) no description available & (gnl|cdd|29142 : 264.0) no description available & (p28583|cdpk_soybn : 210.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (reliability: 548.0) & (original description: Putative PPCK1, Description = Phosphoenolpyruvate carboxylase kinase 1, PFAM = PF00069)' T '4.3.16' 'glycolysis.unclear/dually targeted.phospho-enol-pyruvate carboxylase kinase (PEPCK)' 'niben044scf00012054ctg004_1-2993' '(at1g08650 : 323.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 286.0) no description available & (gnl|cdd|29142 : 268.0) no description available & (p49101|cdpk2_maize : 241.0) Calcium-dependent protein kinase 2 (EC 2.7.11.1) (CDPK 2) - Zea mays (Maize) & (reliability: 634.0) & (original description: Putative PPCK1, Description = Phosphoenolpyruvate carboxylase kinase 1, PFAM = PF00069)' T '4.3.16' 'glycolysis.unclear/dually targeted.phospho-enol-pyruvate carboxylase kinase (PEPCK)' 'niben044scf00061397ctg001_3372-6586' '(at1g08650 : 324.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 292.0) no description available & (gnl|cdd|29142 : 275.0) no description available & (p28582|cdpk_dauca : 247.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 640.0) & (original description: Putative PPCK1, Description = Phosphoenolpyruvate carboxylase kinase 1, PFAM = PF00069)' T '4.3.16' 'glycolysis.unclear/dually targeted.phospho-enol-pyruvate carboxylase kinase (PEPCK)' 'niben101scf02724_653688-658357' '(at3g04530 : 304.0) Encodes a second Arabidopsis phosphoenolpyruvate carboxylase kinase gene product with a different expression pattern from PPCK1. Expression of the gene is upregulated by exposure of the plant to light.; phosphoenolpyruvate carboxylase kinase 2 (PPCK2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 1 (TAIR:AT1G08650.1); Has 120539 Blast hits to 118552 proteins in 3545 species: Archae - 165; Bacteria - 14785; Metazoa - 43114; Fungi - 13204; Plants - 27915; Viruses - 518; Other Eukaryotes - 20838 (source: NCBI BLink). & (gnl|cdd|35255 : 284.0) no description available & (gnl|cdd|29142 : 269.0) no description available & (p28582|cdpk_dauca : 258.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 608.0) & (original description: Putative PPCK2, Description = Phosphoenolpyruvate carboxylase kinase 2, PFAM = PF00069)' T '4.3.16' 'glycolysis.unclear/dually targeted.phospho-enol-pyruvate carboxylase kinase (PEPCK)' 'niben101scf04332_43218-46140' '(at1g08650 : 325.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 287.0) no description available & (gnl|cdd|29142 : 270.0) no description available & (p28582|cdpk_dauca : 241.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 638.0) & (original description: Putative SNIK, Description = Phosphoenolpyruvate carboxylase-kinase, PFAM = PF00069)' T '4.3.16' 'glycolysis.unclear/dually targeted.phospho-enol-pyruvate carboxylase kinase (PEPCK)' 'niben101scf04332_268696-271608' '(at1g08650 : 318.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 286.0) no description available & (gnl|cdd|29142 : 277.0) no description available & (p28582|cdpk_dauca : 253.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 634.0) & (original description: Putative PpcK4, Description = Phosphoenolpyruvate carboxylase kinase 4, PFAM = PF00069)' T '4.3.16' 'glycolysis.unclear/dually targeted.phospho-enol-pyruvate carboxylase kinase (PEPCK)' 'niben101scf04882_37028-39955' '(at1g08650 : 328.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 292.0) no description available & (gnl|cdd|29142 : 274.0) no description available & (p28582|cdpk_dauca : 246.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 646.0) & (original description: Putative PPCK1, Description = Phosphoenolpyruvate carboxylase kinase 1, PFAM = PF00069)' T '4.3.16' 'glycolysis.unclear/dually targeted.phospho-enol-pyruvate carboxylase kinase (PEPCK)' 'niben101scf14945_96516-100392' '(at1g08650 : 300.0) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.; phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1). & (gnl|cdd|35255 : 278.0) no description available & (gnl|cdd|29142 : 272.0) no description available & (p28582|cdpk_dauca : 228.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 562.0) & (original description: Putative PPCK1, Description = Phosphoenolpyruvate carboxylase kinase 1, PFAM = PF00069)' T '4.1001' 'glycolysis' 'dihydroxyacetone-p' 'PS.calvin cycle; photorespiration; glycolysis' M '4.1002' 'glycolysis' 'glyceraldehyde-3-p' 'PS.calvin cycle; photorespiration; glycolysis' M '4.1003' 'glycolysis' 'glycerate-1,3-bisp' 'PS.calvin cycle; photorespiration; glycolysis' M '4.1004' 'glycolysis' 'glycerate-3-p' 'PS.calvin cycle; photorespiration; glycolysis' M '4.1005' 'glycolysis' 'p-enolpyruvate' 'glyclolysis' M '4.1006' 'glycolysis' 'pyruvate' 'glyclolysis' M '4.1007' 'glycolysis' 'glycerate-2-p' 'glyclolysis' M '5' 'fermentation' '' '' '5.1' 'fermentation.LDH' 'niben101scf03374_379984-385132' '(at4g17260 : 521.0) Lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: response to salt stress, response to abscisic acid stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: L-lactate dehydrogenase (InterPro:IPR011304), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), L-lactate dehydrogenase, active site (InterPro:IPR018177), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: peroxisomal NAD-malate dehydrogenase 1 (TAIR:AT2G22780.1); Has 16816 Blast hits to 16800 proteins in 5066 species: Archae - 248; Bacteria - 11859; Metazoa - 1173; Fungi - 517; Plants - 405; Viruses - 0; Other Eukaryotes - 2614 (source: NCBI BLink). & (gnl|cdd|36708 : 463.0) no description available & (p22989|ldhb_horvu : 444.0) L-lactate dehydrogenase B (EC 1.1.1.27) (LDH-B) (Fragment) - Hordeum vulgare (Barley) & (gnl|cdd|58488 : 395.0) no description available & (reliability: 1042.0) & (original description: Putative ldh, Description = L-lactate dehydrogenase, PFAM = PF00056;PF02866)' T '5.2' 'fermentation.PDC' 'nbv0.3scaffold55068_1-5391' '(at5g17380 : 897.0) Thiamine pyrophosphate dependent pyruvate decarboxylase family protein; FUNCTIONS IN: pyruvate decarboxylase activity, magnesium ion binding, thiamin pyrophosphate binding, transferase activity, catalytic activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: chlorsulfuron/imidazolinone resistant 1 (TAIR:AT3G48560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36399 : 687.0) no description available & (gnl|cdd|82890 : 573.0) no description available & (p09114|ilv2_tobac : 139.0) Acetolactate synthase 2, chloroplast precursor (EC 2.2.1.6) (Acetolactate synthase II) (Acetohydroxy-acid synthase II) (ALS II) - Nicotiana tabacum (Common tobacco) & (reliability: 1794.0) & (original description: Putative HACL, Description = 2-hydroxyacyl-CoA lyase, PFAM = PF02776;PF00205;PF02775)' T '5.2' 'fermentation.PDC' 'niben101scf00149_1298699-1304147' '(at5g54960 : 1020.0) pyruvate decarboxylase-2; pyruvate decarboxylase-2 (PDC2); FUNCTIONS IN: pyruvate decarboxylase activity, magnesium ion binding, carboxy-lyase activity, thiamin pyrophosphate binding, catalytic activity; INVOLVED IN: response to hypoxia; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Pyruvate decarboxylase/indolepyruvate decarboxylase (InterPro:IPR012110), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein (TAIR:AT4G33070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p51848|pdc2_orysa : 975.0) Pyruvate decarboxylase isozyme 2 (EC 4.1.1.1) (PDC) - Oryza sativa (Rice) & (gnl|cdd|36398 : 872.0) no description available & (gnl|cdd|33742 : 517.0) no description available & (reliability: 2040.0) & (original description: Putative PDC2, Description = Pyruvate decarboxylase 2, PFAM = PF02776;PF00205;PF02775)' T '5.2' 'fermentation.PDC' 'niben101scf01212_1-6982' '(p51850|pdc1_pea : 949.0) Pyruvate decarboxylase isozyme 1 (EC 4.1.1.1) (PDC) - Pisum sativum (Garden pea) & (at4g33070 : 871.0) Thiamine pyrophosphate dependent pyruvate decarboxylase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Pyruvate decarboxylase/indolepyruvate decarboxylase (InterPro:IPR012110), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein (TAIR:AT5G01320.1); Has 20589 Blast hits to 20526 proteins in 2548 species: Archae - 428; Bacteria - 13367; Metazoa - 177; Fungi - 761; Plants - 551; Viruses - 4; Other Eukaryotes - 5301 (source: NCBI BLink). & (gnl|cdd|36398 : 752.0) no description available & (gnl|cdd|33742 : 478.0) no description available & (reliability: 1742.0) & (original description: Putative PDC1, Description = Pyruvate decarboxylase 1, PFAM = PF02775;PF00205;PF02776)' T '5.2' 'fermentation.PDC' 'niben101scf02538_678393-684028' '(at5g17380 : 897.0) Thiamine pyrophosphate dependent pyruvate decarboxylase family protein; FUNCTIONS IN: pyruvate decarboxylase activity, magnesium ion binding, thiamin pyrophosphate binding, transferase activity, catalytic activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: chlorsulfuron/imidazolinone resistant 1 (TAIR:AT3G48560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36399 : 688.0) no description available & (gnl|cdd|82890 : 575.0) no description available & (p27818|ilv1_brana : 143.0) Acetolactate synthase 1, chloroplast precursor (EC 2.2.1.6) (Acetolactate synthase I) (Acetohydroxy-acid synthase I) (ALS I) - Brassica napus (Rape) & (reliability: 1794.0) & (original description: Putative oxc, Description = Oxalyl-CoA decarboxylase, PFAM = PF02775;PF00205;PF02776)' T '5.2' 'fermentation.PDC' 'niben101scf03716_64504-69204' '(p51846|pdc2_tobac : 1134.0) Pyruvate decarboxylase isozyme 2 (EC 4.1.1.1) (PDC) - Nicotiana tabacum (Common tobacco) & (at4g33070 : 988.0) Thiamine pyrophosphate dependent pyruvate decarboxylase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Pyruvate decarboxylase/indolepyruvate decarboxylase (InterPro:IPR012110), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein (TAIR:AT5G01320.1); Has 20589 Blast hits to 20526 proteins in 2548 species: Archae - 428; Bacteria - 13367; Metazoa - 177; Fungi - 761; Plants - 551; Viruses - 4; Other Eukaryotes - 5301 (source: NCBI BLink). & (gnl|cdd|36398 : 875.0) no description available & (gnl|cdd|33742 : 528.0) no description available & (reliability: 1976.0) & (original description: Putative PDC2, Description = Pyruvate decarboxylase 2, PFAM = PF02776;PF00205;PF02775)' T '5.2' 'fermentation.PDC' 'niben101scf05368_667471-672117' '(at4g33070 : 1006.0) Thiamine pyrophosphate dependent pyruvate decarboxylase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Pyruvate decarboxylase/indolepyruvate decarboxylase (InterPro:IPR012110), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein (TAIR:AT5G01320.1); Has 20589 Blast hits to 20526 proteins in 2548 species: Archae - 428; Bacteria - 13367; Metazoa - 177; Fungi - 761; Plants - 551; Viruses - 4; Other Eukaryotes - 5301 (source: NCBI BLink). & (p51848|pdc2_orysa : 965.0) Pyruvate decarboxylase isozyme 2 (EC 4.1.1.1) (PDC) - Oryza sativa (Rice) & (gnl|cdd|36398 : 883.0) no description available & (gnl|cdd|33742 : 524.0) no description available & (reliability: 2012.0) & (original description: Putative PDC1, Description = Pyruvate decarboxylase 1, PFAM = PF00205;PF02775;PF02776)' T '5.3' 'fermentation.ADH' 'nbv0.3scaffold3657_15751-23936' '(gnl|cdd|35245 : 317.0) no description available & (gnl|cdd|31262 : 266.0) no description available & (at1g32780 : 224.0) GroES-like zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT1G64710.1); Has 32235 Blast hits to 32213 proteins in 3118 species: Archae - 738; Bacteria - 20422; Metazoa - 1293; Fungi - 2369; Plants - 4116; Viruses - 3; Other Eukaryotes - 3294 (source: NCBI BLink). & (p48977|adh_maldo : 223.0) Alcohol dehydrogenase (EC 1.1.1.1) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 412.0) & (original description: Putative adh3, Description = S-(hydroxymethyl)glutathione dehydrogenase, PFAM = PF08240;PF00107)' T '5.3' 'fermentation.ADH' 'nbv0.3scaffold46426_10452-16049' '(p25141|adh1_pethy : 702.0) Alcohol dehydrogenase 1 (EC 1.1.1.1) - Petunia hybrida (Petunia) & (at1g77120 : 639.0) Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; alcohol dehydrogenase 1 (ADH1); FUNCTIONS IN: alcohol dehydrogenase (NAD) activity; INVOLVED IN: response to cadmium ion, cellular respiration, response to salt stress, response to hypoxia, response to osmotic stress; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT5G43940.1); Has 34806 Blast hits to 34785 proteins in 3218 species: Archae - 735; Bacteria - 22358; Metazoa - 1323; Fungi - 2490; Plants - 4199; Viruses - 3; Other Eukaryotes - 3698 (source: NCBI BLink). & (gnl|cdd|35245 : 576.0) no description available & (gnl|cdd|31262 : 425.0) no description available & (reliability: 1278.0) & (original description: Putative ADH1, Description = Alcohol dehydrogenase 1, PFAM = PF08240;PF00107)' T '5.3' 'fermentation.ADH' 'nbv0.5scaffold674_398972-406791' '(gnl|cdd|35245 : 385.0) no description available & (gnl|cdd|31262 : 320.0) no description available & (p48977|adh_maldo : 275.0) Alcohol dehydrogenase (EC 1.1.1.1) - Malus domestica (Apple) (Malus sylvestris) & (at1g22440 : 271.0) Zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT1G22430.2); Has 32607 Blast hits to 32587 proteins in 3168 species: Archae - 747; Bacteria - 20763; Metazoa - 1197; Fungi - 2370; Plants - 4104; Viruses - 3; Other Eukaryotes - 3423 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative ALDH, Description = Putative alcohol dehydrogenase, PFAM = PF00107;PF08240)' T '5.3' 'fermentation.ADH' 'nbv0.5scaffold2906_118583-123400' '(p25141|adh1_pethy : 596.0) Alcohol dehydrogenase 1 (EC 1.1.1.1) - Petunia hybrida (Petunia) & (at1g77120 : 546.0) Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; alcohol dehydrogenase 1 (ADH1); FUNCTIONS IN: alcohol dehydrogenase (NAD) activity; INVOLVED IN: response to cadmium ion, cellular respiration, response to salt stress, response to hypoxia, response to osmotic stress; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT5G43940.1); Has 34806 Blast hits to 34785 proteins in 3218 species: Archae - 735; Bacteria - 22358; Metazoa - 1323; Fungi - 2490; Plants - 4199; Viruses - 3; Other Eukaryotes - 3698 (source: NCBI BLink). & (gnl|cdd|35245 : 493.0) no description available & (gnl|cdd|31262 : 376.0) no description available & (reliability: 1092.0) & (original description: Putative ADH1, Description = Alcohol dehydrogenase 1, PFAM = PF08240;PF00107)' T '5.3' 'fermentation.ADH' 'niben101scf01658_127644-135677' '(gnl|cdd|35245 : 398.0) no description available & (gnl|cdd|31262 : 329.0) no description available & (p48977|adh_maldo : 286.0) Alcohol dehydrogenase (EC 1.1.1.1) - Malus domestica (Apple) (Malus sylvestris) & (at1g22440 : 280.0) Zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT1G22430.2); Has 32607 Blast hits to 32587 proteins in 3168 species: Archae - 747; Bacteria - 20763; Metazoa - 1197; Fungi - 2370; Plants - 4104; Viruses - 3; Other Eukaryotes - 3423 (source: NCBI BLink). & (reliability: 528.0) & (original description: Putative ALDH, Description = Putative alcohol dehydrogenase, PFAM = PF00107;PF08240)' T '5.5' 'fermentation.phosphate acetyltransferase' '' '' '5.6' 'fermentation.acetate kinase' '' '' '5.8' 'fermentation.pyruvate::ferredoxin oxidoreductase' '' '' '5.10' 'fermentation.aldehyde dehydrogenase' 'nbv0.5scaffold3889_61350-70968' '(at3g48000 : 833.0) Encodes a putative (NAD+) aldehyde dehydrogenase.; aldehyde dehydrogenase 2B4 (ALDH2B4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B7 (TAIR:AT1G23800.1); Has 61695 Blast hits to 61296 proteins in 3003 species: Archae - 476; Bacteria - 35240; Metazoa - 2662; Fungi - 2127; Plants - 1668; Viruses - 0; Other Eukaryotes - 19522 (source: NCBI BLink). & (gnl|cdd|37661 : 703.0) no description available & (gnl|cdd|84580 : 590.0) no description available & (p17202|badh_spiol : 373.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1666.0) & (original description: Putative adh, Description = Aldehyde dehydrogenase, mitochondrial, PFAM = PF00171)' T '5.10' 'fermentation.aldehyde dehydrogenase' 'nbv0.5scaffold5306_128611-138186' '(at3g24503 : 592.0) Arabidopsis thaliana aldehyde dehydrogenase AtALDH1a mRNA. a sinapaldehyde dehydrogenase catalyzes both the oxidation of coniferylaldehyde and sinapaldehyde forming ferulic acid and sinapic acid, respectively; aldehyde dehydrogenase 2C4 (ALDH2C4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, coniferyl-aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: phenylpropanoid biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B4 (TAIR:AT3G48000.1); Has 62142 Blast hits to 61763 proteins in 3025 species: Archae - 475; Bacteria - 35763; Metazoa - 2632; Fungi - 2134; Plants - 1679; Viruses - 0; Other Eukaryotes - 19459 (source: NCBI BLink). & (gnl|cdd|37661 : 531.0) no description available & (gnl|cdd|84580 : 492.0) no description available & (p17202|badh_spiol : 323.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1184.0) & (original description: Putative adh, Description = Aldehyde dehydrogenase, PFAM = PF00171)' T '5.10' 'fermentation.aldehyde dehydrogenase' 'niben101scf00761_240590-249470' '(gnl|cdd|37667 : 120.0) no description available & (at4g36250 : 106.0) Encodes a putative aldehyde dehydrogenase. The gene is not responsive to osmotic stress and is expressed constitutively at a low level in plantlets and root cultures.; aldehyde dehydrogenase 3F1 (ALDH3F1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: cellular aldehyde metabolic process, oxidation reduction, metabolic process; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase NAD(P)-dependent (InterPro:IPR012394); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 3H1 (TAIR:AT1G44170.2); Has 51213 Blast hits to 51182 proteins in 2839 species: Archae - 470; Bacteria - 31264; Metazoa - 2305; Fungi - 2096; Plants - 995; Viruses - 0; Other Eukaryotes - 14083 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative ALDH3, Description = Aldehyde dehydrogenase, PFAM = PF00171)' T '5.10' 'fermentation.aldehyde dehydrogenase' 'niben101scf00761_240623-263932' '(gnl|cdd|37667 : 554.0) no description available & (at4g36250 : 531.0) Encodes a putative aldehyde dehydrogenase. The gene is not responsive to osmotic stress and is expressed constitutively at a low level in plantlets and root cultures.; aldehyde dehydrogenase 3F1 (ALDH3F1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: cellular aldehyde metabolic process, oxidation reduction, metabolic process; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase NAD(P)-dependent (InterPro:IPR012394); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 3H1 (TAIR:AT1G44170.2); Has 51213 Blast hits to 51182 proteins in 2839 species: Archae - 470; Bacteria - 31264; Metazoa - 2305; Fungi - 2096; Plants - 995; Viruses - 0; Other Eukaryotes - 14083 (source: NCBI BLink). & (gnl|cdd|31216 : 282.0) no description available & (p17202|badh_spiol : 125.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1062.0) & (original description: Putative gabD, Description = Aldehyde dehydrogenase, PFAM = PF00171)' T '5.10' 'fermentation.aldehyde dehydrogenase' 'niben101scf00761_248377-253787' '(gnl|cdd|37667 : 157.0) no description available & (at4g36250 : 144.0) Encodes a putative aldehyde dehydrogenase. The gene is not responsive to osmotic stress and is expressed constitutively at a low level in plantlets and root cultures.; aldehyde dehydrogenase 3F1 (ALDH3F1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: cellular aldehyde metabolic process, oxidation reduction, metabolic process; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase NAD(P)-dependent (InterPro:IPR012394); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 3H1 (TAIR:AT1G44170.2); Has 51213 Blast hits to 51182 proteins in 2839 species: Archae - 470; Bacteria - 31264; Metazoa - 2305; Fungi - 2096; Plants - 995; Viruses - 0; Other Eukaryotes - 14083 (source: NCBI BLink). & (gnl|cdd|84580 : 95.2) no description available & (reliability: 288.0) & (original description: Putative aldA, Description = Aldehyde dehydrogenase, PFAM = PF00171)' T '5.10' 'fermentation.aldehyde dehydrogenase' 'niben101scf00789_52590-62977' '(at3g24503 : 717.0) Arabidopsis thaliana aldehyde dehydrogenase AtALDH1a mRNA. a sinapaldehyde dehydrogenase catalyzes both the oxidation of coniferylaldehyde and sinapaldehyde forming ferulic acid and sinapic acid, respectively; aldehyde dehydrogenase 2C4 (ALDH2C4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, coniferyl-aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: phenylpropanoid biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B4 (TAIR:AT3G48000.1); Has 62142 Blast hits to 61763 proteins in 3025 species: Archae - 475; Bacteria - 35763; Metazoa - 2632; Fungi - 2134; Plants - 1679; Viruses - 0; Other Eukaryotes - 19459 (source: NCBI BLink). & (gnl|cdd|37661 : 636.0) no description available & (gnl|cdd|84580 : 587.0) no description available & (p17202|badh_spiol : 395.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1434.0) & (original description: Putative rf2c, Description = Cytosolic aldehyde dehydrogenase RF2C, PFAM = PF00171)' T '5.10' 'fermentation.aldehyde dehydrogenase' 'niben101scf00802_57598-68605' '(at3g48000 : 880.0) Encodes a putative (NAD+) aldehyde dehydrogenase.; aldehyde dehydrogenase 2B4 (ALDH2B4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B7 (TAIR:AT1G23800.1); Has 61695 Blast hits to 61296 proteins in 3003 species: Archae - 476; Bacteria - 35240; Metazoa - 2662; Fungi - 2127; Plants - 1668; Viruses - 0; Other Eukaryotes - 19522 (source: NCBI BLink). & (gnl|cdd|37661 : 718.0) no description available & (gnl|cdd|84580 : 598.0) no description available & (p17202|badh_spiol : 381.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1760.0) & (original description: Putative aldh, Description = Aldehyde dehydrogenase, mitochondrial, PFAM = PF00171)' T '5.10' 'fermentation.aldehyde dehydrogenase' 'niben101scf03534_129259-137450' '(at1g23800 : 845.0) Encodes a mitochondrial aldehyde dehydrogenase; nuclear gene for mitochondrial product.; aldehyde dehydrogenase 2B7 (ALDH2B7); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, LP.10 ten leaves visible, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B4 (TAIR:AT3G48000.1); Has 60835 Blast hits to 60447 proteins in 2994 species: Archae - 474; Bacteria - 34339; Metazoa - 2649; Fungi - 2135; Plants - 1675; Viruses - 0; Other Eukaryotes - 19563 (source: NCBI BLink). & (gnl|cdd|37661 : 728.0) no description available & (gnl|cdd|84580 : 606.0) no description available & (p17202|badh_spiol : 372.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1690.0) & (original description: Putative rf2, Description = Aldehyde dehydrogenase, PFAM = PF00171)' T '5.10' 'fermentation.aldehyde dehydrogenase' 'niben101scf03998_34621-43376' '(at1g54100 : 815.0) Aldehyde dehydrogenase; aldehyde dehydrogenase 7B4 (ALDH7B4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 5F1 (TAIR:AT1G79440.1); Has 58930 Blast hits to 58766 proteins in 3009 species: Archae - 476; Bacteria - 35564; Metazoa - 2491; Fungi - 2115; Plants - 1217; Viruses - 0; Other Eukaryotes - 17067 (source: NCBI BLink). & (q9zpb7|al7a1_maldo : 805.0) Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3) (Antiquitin-1) (Matured fruit 60 kDa protein) (MF-60) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|37664 : 793.0) no description available & (gnl|cdd|84580 : 428.0) no description available & (reliability: 1630.0) & (original description: Putative alh, Description = Aldehyde dehydrogenase, PFAM = PF00171)' T '5.10' 'fermentation.aldehyde dehydrogenase' 'niben101scf04296_79910-86571' '(at3g48000 : 881.0) Encodes a putative (NAD+) aldehyde dehydrogenase.; aldehyde dehydrogenase 2B4 (ALDH2B4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B7 (TAIR:AT1G23800.1); Has 61695 Blast hits to 61296 proteins in 3003 species: Archae - 476; Bacteria - 35240; Metazoa - 2662; Fungi - 2127; Plants - 1668; Viruses - 0; Other Eukaryotes - 19522 (source: NCBI BLink). & (gnl|cdd|37661 : 721.0) no description available & (gnl|cdd|84580 : 598.0) no description available & (p17202|badh_spiol : 379.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1762.0) & (original description: Putative adh, Description = Aldehyde dehydrogenase, mitochondrial, PFAM = PF00171)' T '5.10' 'fermentation.aldehyde dehydrogenase' 'niben101scf05304_13575-24089' '(at1g44170 : 681.0) Encodes a protein similar to the aldehyde dehydrogenase cp-ADH from C.plantagineum. Constitutively expressed at low levels.; aldehyde dehydrogenase 3H1 (ALDH3H1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: endoplasmic reticulum, plastid, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase NAD(P)-dependent (InterPro:IPR012394), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 3I1 (TAIR:AT4G34240.1); Has 53834 Blast hits to 53786 proteins in 2931 species: Archae - 469; Bacteria - 32921; Metazoa - 2418; Fungi - 2071; Plants - 990; Viruses - 0; Other Eukaryotes - 14965 (source: NCBI BLink). & (gnl|cdd|37667 : 649.0) no description available & (gnl|cdd|31216 : 294.0) no description available & (p17202|badh_spiol : 149.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1362.0) & (original description: Putative ALDH, Description = Aldehyde dehydrogenase, PFAM = PF00171)' T '5.10' 'fermentation.aldehyde dehydrogenase' 'niben101scf07034_471093-478912' '(at4g36250 : 634.0) Encodes a putative aldehyde dehydrogenase. The gene is not responsive to osmotic stress and is expressed constitutively at a low level in plantlets and root cultures.; aldehyde dehydrogenase 3F1 (ALDH3F1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: cellular aldehyde metabolic process, oxidation reduction, metabolic process; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase NAD(P)-dependent (InterPro:IPR012394); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 3H1 (TAIR:AT1G44170.2); Has 51213 Blast hits to 51182 proteins in 2839 species: Archae - 470; Bacteria - 31264; Metazoa - 2305; Fungi - 2096; Plants - 995; Viruses - 0; Other Eukaryotes - 14083 (source: NCBI BLink). & (gnl|cdd|37667 : 596.0) no description available & (gnl|cdd|31216 : 276.0) no description available & (p28237|badh_betvu : 144.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Beta vulgaris (Sugar beet) & (reliability: 1268.0) & (original description: Putative ALDH3F1, Description = Aldehyde dehydrogenase family 3 member F1, PFAM = PF00171)' T '5.10' 'fermentation.aldehyde dehydrogenase' 'niben101scf08341_734692-744378' '(at3g24503 : 686.0) Arabidopsis thaliana aldehyde dehydrogenase AtALDH1a mRNA. a sinapaldehyde dehydrogenase catalyzes both the oxidation of coniferylaldehyde and sinapaldehyde forming ferulic acid and sinapic acid, respectively; aldehyde dehydrogenase 2C4 (ALDH2C4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, coniferyl-aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: phenylpropanoid biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B4 (TAIR:AT3G48000.1); Has 62142 Blast hits to 61763 proteins in 3025 species: Archae - 475; Bacteria - 35763; Metazoa - 2632; Fungi - 2134; Plants - 1679; Viruses - 0; Other Eukaryotes - 19459 (source: NCBI BLink). & (gnl|cdd|37661 : 641.0) no description available & (gnl|cdd|84580 : 589.0) no description available & (p17202|badh_spiol : 365.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1372.0) & (original description: Putative rf2c, Description = Cytosolic aldehyde dehydrogenase RF2C, PFAM = PF00171)' T '5.10' 'fermentation.aldehyde dehydrogenase' 'niben101scf36674_41062-46981' '(at1g23800 : 843.0) Encodes a mitochondrial aldehyde dehydrogenase; nuclear gene for mitochondrial product.; aldehyde dehydrogenase 2B7 (ALDH2B7); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, LP.10 ten leaves visible, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B4 (TAIR:AT3G48000.1); Has 60835 Blast hits to 60447 proteins in 2994 species: Archae - 474; Bacteria - 34339; Metazoa - 2649; Fungi - 2135; Plants - 1675; Viruses - 0; Other Eukaryotes - 19563 (source: NCBI BLink). & (gnl|cdd|37661 : 723.0) no description available & (gnl|cdd|84580 : 609.0) no description available & (p17202|badh_spiol : 374.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1686.0) & (original description: Putative aldh, Description = Aldehyde dehydrogenase, PFAM = PF00171)' T '5.1001' 'fermentation' 'lactate' 'fermentation' M '5.1002' 'fermentation' 'alanine' 'amino acid synthesis.alanine; amino acid degradation.alanine; amino acid degradation.tryptophan; Co-factor metabolism; fermentation' M '6' 'gluconeogenesis / glyoxylate cycle' 'niben044scf00009193ctg005_23536-25764' '(at3g16910 : 471.0) Encodes a peroxisomal protein with acetyl-CoA synthetase activity that is responsible for the activation of acetate for entry into the glyoxylate cycle.; acyl-activating enzyme 7 (AAE7); FUNCTIONS IN: acetate-CoA ligase activity, AMP binding; INVOLVED IN: glyoxylate cycle, acetate metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 1 (TAIR:AT1G20560.1); Has 73044 Blast hits to 67204 proteins in 3521 species: Archae - 1140; Bacteria - 48125; Metazoa - 3129; Fungi - 3108; Plants - 2327; Viruses - 1; Other Eukaryotes - 15214 (source: NCBI BLink). & (gnl|cdd|82505 : 426.0) no description available & (gnl|cdd|36391 : 273.0) no description available & (q42982|4cl2_orysa : 89.0) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Oryza sativa (Rice) & (reliability: 942.0) & (original description: Putative alkK, Description = Acyl-CoA synthetase, PFAM = PF13193;PF00501)' T '6' 'gluconeogenesis / glyoxylate cycle' 'niben101scf00094_379735-388916' '(at3g16910 : 902.0) Encodes a peroxisomal protein with acetyl-CoA synthetase activity that is responsible for the activation of acetate for entry into the glyoxylate cycle.; acyl-activating enzyme 7 (AAE7); FUNCTIONS IN: acetate-CoA ligase activity, AMP binding; INVOLVED IN: glyoxylate cycle, acetate metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 1 (TAIR:AT1G20560.1); Has 73044 Blast hits to 67204 proteins in 3521 species: Archae - 1140; Bacteria - 48125; Metazoa - 3129; Fungi - 3108; Plants - 2327; Viruses - 1; Other Eukaryotes - 15214 (source: NCBI BLink). & (gnl|cdd|82505 : 774.0) no description available & (gnl|cdd|36391 : 492.0) no description available & (o24145|4cl1_tobac : 122.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1804.0) & (original description: Putative AAE7, Description = Acetate/butyrate--CoA ligase AAE7, peroxisomal, PFAM = PF00501;PF13193)' T '6' 'gluconeogenesis / glyoxylate cycle' 'niben101scf09203_169270-176966' '(at3g16910 : 886.0) Encodes a peroxisomal protein with acetyl-CoA synthetase activity that is responsible for the activation of acetate for entry into the glyoxylate cycle.; acyl-activating enzyme 7 (AAE7); FUNCTIONS IN: acetate-CoA ligase activity, AMP binding; INVOLVED IN: glyoxylate cycle, acetate metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 1 (TAIR:AT1G20560.1); Has 73044 Blast hits to 67204 proteins in 3521 species: Archae - 1140; Bacteria - 48125; Metazoa - 3129; Fungi - 3108; Plants - 2327; Viruses - 1; Other Eukaryotes - 15214 (source: NCBI BLink). & (gnl|cdd|82505 : 794.0) no description available & (gnl|cdd|36391 : 494.0) no description available & (o24145|4cl1_tobac : 132.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1772.0) & (original description: Putative AAE7, Description = Acetate/butyrate--CoA ligase AAE7, peroxisomal, PFAM = PF13193;PF00501)' T '6.1' 'gluconeogenesis / glyoxylate cycle.citrate synthase' 'nbv0.5scaffold5609_100124-118855' '(at3g58750 : 845.0) Encodes a peroxisomal citrate synthase that is expressed throughout seedling and shoot development.; citrate synthase 2 (CSY2); FUNCTIONS IN: citrate (SI)-synthase activity; INVOLVED IN: fatty acid beta-oxidation, tricarboxylic acid cycle; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Citrate synthase, type II (InterPro:IPR010953), Citrate synthase-like, large alpha subdomain (InterPro:IPR016142), Citrate synthase active site (InterPro:IPR019810), Citrate synthase-like, core (InterPro:IPR016141), Citrate synthase-like (InterPro:IPR002020); BEST Arabidopsis thaliana protein match is: citrate synthase 3 (TAIR:AT2G42790.1); Has 13448 Blast hits to 13446 proteins in 3190 species: Archae - 173; Bacteria - 8550; Metazoa - 303; Fungi - 319; Plants - 178; Viruses - 0; Other Eukaryotes - 3925 (source: NCBI BLink). & (p49299|cysz_cucma : 829.0) Citrate synthase, glyoxysomal precursor (EC 2.3.3.1) (GCS) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|81661 : 504.0) no description available & (gnl|cdd|37828 : 492.0) no description available & (reliability: 1690.0) & (original description: Putative aarA, Description = Citrate synthase, PFAM = PF00285)' T '6.1' 'gluconeogenesis / glyoxylate cycle.citrate synthase' 'niben101scf00996_107570-117708' '(at3g58750 : 846.0) Encodes a peroxisomal citrate synthase that is expressed throughout seedling and shoot development.; citrate synthase 2 (CSY2); FUNCTIONS IN: citrate (SI)-synthase activity; INVOLVED IN: fatty acid beta-oxidation, tricarboxylic acid cycle; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Citrate synthase, type II (InterPro:IPR010953), Citrate synthase-like, large alpha subdomain (InterPro:IPR016142), Citrate synthase active site (InterPro:IPR019810), Citrate synthase-like, core (InterPro:IPR016141), Citrate synthase-like (InterPro:IPR002020); BEST Arabidopsis thaliana protein match is: citrate synthase 3 (TAIR:AT2G42790.1); Has 13448 Blast hits to 13446 proteins in 3190 species: Archae - 173; Bacteria - 8550; Metazoa - 303; Fungi - 319; Plants - 178; Viruses - 0; Other Eukaryotes - 3925 (source: NCBI BLink). & (p49299|cysz_cucma : 833.0) Citrate synthase, glyoxysomal precursor (EC 2.3.3.1) (GCS) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|81661 : 506.0) no description available & (gnl|cdd|37828 : 494.0) no description available & (reliability: 1692.0) & (original description: Putative aarA, Description = Citrate synthase, PFAM = PF00285)' T '6.2' 'gluconeogenesis / glyoxylate cycle.malate synthase' 'niben101scf02914_89913-94833' '(p17815|masy_ricco : 1020.0) Malate synthase, glyoxysomal (EC 2.3.3.9) - Ricinus communis (Castor bean) & (at5g03860 : 971.0) Encodes a protein with malate synthase activity.; malate synthase (MLS); FUNCTIONS IN: malate synthase activity; INVOLVED IN: glyoxylate cycle; CONTAINS InterPro DOMAIN/s: Malate synthase-like (InterPro:IPR011076), Malate synthase, conserved site (InterPro:IPR019830), Malate synthase A (InterPro:IPR006252), Malate synthase (InterPro:IPR001465). & (gnl|cdd|36475 : 814.0) no description available & (gnl|cdd|48433 : 807.0) no description available & (reliability: 1942.0) & (original description: Putative aceB, Description = Malate synthase, PFAM = PF01274)' T '6.3' 'gluconeogenesis / glyoxylate cycle.Malate DH' 'nbv0.5scaffold87_874509-878293' '(p46488|mdhg_cucsa : 607.0) Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) - Cucumis sativus (Cucumber) & (at2g22780 : 578.0) encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA.; peroxisomal NAD-malate dehydrogenase 1 (PMDH1); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of fatty acid beta-oxidation, regulation of photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), NAD(P)-binding domain (InterPro:IPR016040), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), L-lactate/malate dehydrogenase (InterPro:IPR001557), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: peroxisomal NAD-malate dehydrogenase 2 (TAIR:AT5G09660.1); Has 16991 Blast hits to 16989 proteins in 5457 species: Archae - 237; Bacteria - 11827; Metazoa - 1259; Fungi - 489; Plants - 758; Viruses - 0; Other Eukaryotes - 2421 (source: NCBI BLink). & (gnl|cdd|36707 : 510.0) no description available & (gnl|cdd|58492 : 463.0) no description available & (reliability: 1156.0) & (original description: Putative gmdh, Description = Malate dehydrogenase, PFAM = PF00056;PF02866)' T '6.3' 'gluconeogenesis / glyoxylate cycle.Malate DH' 'nbv0.5scaffold1470_211625-219244' '(p46488|mdhg_cucsa : 579.0) Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) - Cucumis sativus (Cucumber) & (at2g22780 : 574.0) encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA.; peroxisomal NAD-malate dehydrogenase 1 (PMDH1); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of fatty acid beta-oxidation, regulation of photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), NAD(P)-binding domain (InterPro:IPR016040), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), L-lactate/malate dehydrogenase (InterPro:IPR001557), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: peroxisomal NAD-malate dehydrogenase 2 (TAIR:AT5G09660.1); Has 16991 Blast hits to 16989 proteins in 5457 species: Archae - 237; Bacteria - 11827; Metazoa - 1259; Fungi - 489; Plants - 758; Viruses - 0; Other Eukaryotes - 2421 (source: NCBI BLink). & (gnl|cdd|36707 : 518.0) no description available & (gnl|cdd|58492 : 477.0) no description available & (reliability: 1148.0) & (original description: Putative gmdh, Description = Malate dehydrogenase, PFAM = PF02866;PF00056)' T '6.3' 'gluconeogenesis / glyoxylate cycle.Malate DH' 'niben101scf01316_242716-250176' '(p46488|mdhg_cucsa : 583.0) Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) - Cucumis sativus (Cucumber) & (at2g22780 : 576.0) encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA.; peroxisomal NAD-malate dehydrogenase 1 (PMDH1); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of fatty acid beta-oxidation, regulation of photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), NAD(P)-binding domain (InterPro:IPR016040), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), L-lactate/malate dehydrogenase (InterPro:IPR001557), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: peroxisomal NAD-malate dehydrogenase 2 (TAIR:AT5G09660.1); Has 16991 Blast hits to 16989 proteins in 5457 species: Archae - 237; Bacteria - 11827; Metazoa - 1259; Fungi - 489; Plants - 758; Viruses - 0; Other Eukaryotes - 2421 (source: NCBI BLink). & (gnl|cdd|36707 : 519.0) no description available & (gnl|cdd|58492 : 478.0) no description available & (reliability: 1152.0) & (original description: Putative gmdh, Description = Malate dehydrogenase, PFAM = PF00056;PF02866)' T '6.3' 'gluconeogenesis / glyoxylate cycle.Malate DH' 'niben101scf04053_408903-414643' '(p46488|mdhg_cucsa : 612.0) Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) - Cucumis sativus (Cucumber) & (at2g22780 : 583.0) encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA.; peroxisomal NAD-malate dehydrogenase 1 (PMDH1); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of fatty acid beta-oxidation, regulation of photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), NAD(P)-binding domain (InterPro:IPR016040), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), L-lactate/malate dehydrogenase (InterPro:IPR001557), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: peroxisomal NAD-malate dehydrogenase 2 (TAIR:AT5G09660.1); Has 16991 Blast hits to 16989 proteins in 5457 species: Archae - 237; Bacteria - 11827; Metazoa - 1259; Fungi - 489; Plants - 758; Viruses - 0; Other Eukaryotes - 2421 (source: NCBI BLink). & (gnl|cdd|36707 : 513.0) no description available & (gnl|cdd|58492 : 465.0) no description available & (reliability: 1166.0) & (original description: Putative gmdh, Description = Malate dehydrogenase, PFAM = PF02866;PF00056)' T '6.4' 'gluconeogenesis / glyoxylate cycle.PEPCK' 'nbv0.3scaffold21562_16405-22123' '(at4g37870 : 921.0) Encodes a putative phosphoenolpyruvate carboxykinase (ATP-dependent).; phosphoenolpyruvate carboxykinase 1 (PCK1); FUNCTIONS IN: phosphoenolpyruvate carboxykinase activity, purine nucleotide binding, phosphoenolpyruvate carboxykinase (ATP) activity, ATP binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cadmium ion, cellular response to phosphate starvation, gluconeogenesis; LOCATED IN: cytosol, nucleolus, nucleus, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoenolpyruvate carboxykinase, N-terminal (InterPro:IPR008210), Phosphoenolpyruvate carboxykinase (ATP), conserved site (InterPro:IPR015994), Phosphoenolpyruvate carboxykinase, ATP-utilising (InterPro:IPR001272), Phosphoenolpyruvate carboxykinase, C-terminal (InterPro:IPR013035); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxykinase 2 (TAIR:AT5G65690.1); Has 4504 Blast hits to 4501 proteins in 1411 species: Archae - 21; Bacteria - 2559; Metazoa - 2; Fungi - 139; Plants - 194; Viruses - 0; Other Eukaryotes - 1589 (source: NCBI BLink). & (q9slz0|pepck_maize : 915.0) Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (PEP carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) - Zea mays (Maize) & (gnl|cdd|29830 : 805.0) no description available & (reliability: 1842.0) & (original description: Putative PCKA, Description = Phosphoenolpyruvate carboxykinase [ATP], PFAM = PF01293)' T '6.4' 'gluconeogenesis / glyoxylate cycle.PEPCK' 'niben044scf00025815ctg000_1-6579' '(at4g37870 : 1056.0) Encodes a putative phosphoenolpyruvate carboxykinase (ATP-dependent).; phosphoenolpyruvate carboxykinase 1 (PCK1); FUNCTIONS IN: phosphoenolpyruvate carboxykinase activity, purine nucleotide binding, phosphoenolpyruvate carboxykinase (ATP) activity, ATP binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cadmium ion, cellular response to phosphate starvation, gluconeogenesis; LOCATED IN: cytosol, nucleolus, nucleus, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoenolpyruvate carboxykinase, N-terminal (InterPro:IPR008210), Phosphoenolpyruvate carboxykinase (ATP), conserved site (InterPro:IPR015994), Phosphoenolpyruvate carboxykinase, ATP-utilising (InterPro:IPR001272), Phosphoenolpyruvate carboxykinase, C-terminal (InterPro:IPR013035); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxykinase 2 (TAIR:AT5G65690.1); Has 4504 Blast hits to 4501 proteins in 1411 species: Archae - 21; Bacteria - 2559; Metazoa - 2; Fungi - 139; Plants - 194; Viruses - 0; Other Eukaryotes - 1589 (source: NCBI BLink). & (p42066|pepck_cucsa : 1032.0) Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (PEP carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) - Cucumis sativus (Cucumber) & (gnl|cdd|29830 : 895.0) no description available & (reliability: 2112.0) & (original description: Putative PCKA, Description = Phosphoenolpyruvate carboxykinase [ATP], PFAM = PF01293)' T '6.4' 'gluconeogenesis / glyoxylate cycle.PEPCK' 'niben101scf13577_205190-210908' '(at4g37870 : 1010.0) Encodes a putative phosphoenolpyruvate carboxykinase (ATP-dependent).; phosphoenolpyruvate carboxykinase 1 (PCK1); FUNCTIONS IN: phosphoenolpyruvate carboxykinase activity, purine nucleotide binding, phosphoenolpyruvate carboxykinase (ATP) activity, ATP binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cadmium ion, cellular response to phosphate starvation, gluconeogenesis; LOCATED IN: cytosol, nucleolus, nucleus, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoenolpyruvate carboxykinase, N-terminal (InterPro:IPR008210), Phosphoenolpyruvate carboxykinase (ATP), conserved site (InterPro:IPR015994), Phosphoenolpyruvate carboxykinase, ATP-utilising (InterPro:IPR001272), Phosphoenolpyruvate carboxykinase, C-terminal (InterPro:IPR013035); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxykinase 2 (TAIR:AT5G65690.1); Has 4504 Blast hits to 4501 proteins in 1411 species: Archae - 21; Bacteria - 2559; Metazoa - 2; Fungi - 139; Plants - 194; Viruses - 0; Other Eukaryotes - 1589 (source: NCBI BLink). & (q9slz0|pepck_maize : 999.0) Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (PEP carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) - Zea mays (Maize) & (gnl|cdd|29830 : 894.0) no description available & (reliability: 2020.0) & (original description: Putative PCK1, Description = Phosphoenolpyruvate carboxykinase [ATP] 1, PFAM = PF01293)' T '6.4' 'gluconeogenesis / glyoxylate cycle.PEPCK' 'niben101scf15153_208082-215131' '(at4g37870 : 1058.0) Encodes a putative phosphoenolpyruvate carboxykinase (ATP-dependent).; phosphoenolpyruvate carboxykinase 1 (PCK1); FUNCTIONS IN: phosphoenolpyruvate carboxykinase activity, purine nucleotide binding, phosphoenolpyruvate carboxykinase (ATP) activity, ATP binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cadmium ion, cellular response to phosphate starvation, gluconeogenesis; LOCATED IN: cytosol, nucleolus, nucleus, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoenolpyruvate carboxykinase, N-terminal (InterPro:IPR008210), Phosphoenolpyruvate carboxykinase (ATP), conserved site (InterPro:IPR015994), Phosphoenolpyruvate carboxykinase, ATP-utilising (InterPro:IPR001272), Phosphoenolpyruvate carboxykinase, C-terminal (InterPro:IPR013035); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxykinase 2 (TAIR:AT5G65690.1); Has 4504 Blast hits to 4501 proteins in 1411 species: Archae - 21; Bacteria - 2559; Metazoa - 2; Fungi - 139; Plants - 194; Viruses - 0; Other Eukaryotes - 1589 (source: NCBI BLink). & (p42066|pepck_cucsa : 1033.0) Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (PEP carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) - Cucumis sativus (Cucumber) & (gnl|cdd|29830 : 890.0) no description available & (reliability: 2116.0) & (original description: Putative PCKA, Description = Phosphoenolpyruvate carboxykinase [ATP], PFAM = PF01293)' T '6.5' 'gluconeogenesis / glyoxylate cycle.pyruvate dikinase' 'niben101scf00621_487311-498035' '(q42910|ppdk_mescr : 1609.0) Pyruvate, phosphate dikinase, chloroplast precursor (EC 2.7.9.1) (Pyruvate, orthophosphate dikinase) - Mesembryanthemum crystallinum (Common ice plant) & (at4g15530 : 1545.0) Encodes a dual-targeted protein believed to act as a pyruvate, orthophosphate dikinase. These enzymes are normally associated with C4 photosynthesis which does not occur in Arabidopsis. However, PPDK may play a role in remobilizing nitrogen during leaf senescence in Arabidopsis. The product of the long transcript (.1 gene model) was shown to be targeted to the chloroplast, whereas the shorter transcript (no targeting sequence) accumulates in the cytosol. The two proteins were also found to be expressed in slightly different tissues.; pyruvate orthophosphate dikinase (PPDK); FUNCTIONS IN: kinase activity, pyruvate, phosphate dikinase activity; INVOLVED IN: phosphorylation, response to absence of light; LOCATED IN: cytosol, nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate phosphate dikinase, PEP/pyruvate-binding (InterPro:IPR002192), PEP-utilising enzyme, mobile domain (InterPro:IPR008279), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), PEP-utilising enzyme, mobile region, conserved site (InterPro:IPR018274), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), PEP-utilising enzyme (InterPro:IPR000121), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), Pyruvate, phosphate dikinase (InterPro:IPR010121); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82908 : 1465.0) no description available & (reliability: 3090.0) & (original description: Putative PPD, Description = Pyruvate, phosphate dikinase, chloroplastic, PFAM = PF01326;PF01326;PF00391;PF02896)' T '6.9' 'gluconeogenesis / glyoxylate cycle.isocitrate lyase' 'nbv0.5scaffold3870_141704-148533' '(p17069|acea_goshi : 900.0) Isocitrate lyase (EC 4.1.3.1) (Isocitrase) (Isocitratase) (ICL) - Gossypium hirsutum (Upland cotton) & (at3g21720 : 853.0) Encodes a glyoxylate cycle enzyme isocitrate lyase (ICL).; isocitrate lyase (ICL); FUNCTIONS IN: isocitrate lyase activity, catalytic activity; INVOLVED IN: carboxylic acid metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, seed, leaf; CONTAINS InterPro DOMAIN/s: Isocitrate lyase/phosphorylmutase, conserved site (InterPro:IPR018523), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Isocitrate lyase (InterPro:IPR006254), Isocitrate lyase/phosphorylmutase (InterPro:IPR000918); BEST Arabidopsis thaliana protein match is: Phosphoenolpyruvate carboxylase family protein (TAIR:AT1G77060.1); Has 9953 Blast hits to 7473 proteins in 1388 species: Archae - 150; Bacteria - 5572; Metazoa - 28; Fungi - 504; Plants - 171; Viruses - 0; Other Eukaryotes - 3528 (source: NCBI BLink). & (gnl|cdd|84790 : 743.0) no description available & (gnl|cdd|36474 : 428.0) no description available & (reliability: 1706.0) & (original description: Putative aceA, Description = Isocitrate lyase, PFAM = PF00463)' T '6.9' 'gluconeogenesis / glyoxylate cycle.isocitrate lyase' 'niben101scf07429_25495-29864' '(p17069|acea_goshi : 961.0) Isocitrate lyase (EC 4.1.3.1) (Isocitrase) (Isocitratase) (ICL) - Gossypium hirsutum (Upland cotton) & (at3g21720 : 912.0) Encodes a glyoxylate cycle enzyme isocitrate lyase (ICL).; isocitrate lyase (ICL); FUNCTIONS IN: isocitrate lyase activity, catalytic activity; INVOLVED IN: carboxylic acid metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, seed, leaf; CONTAINS InterPro DOMAIN/s: Isocitrate lyase/phosphorylmutase, conserved site (InterPro:IPR018523), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Isocitrate lyase (InterPro:IPR006254), Isocitrate lyase/phosphorylmutase (InterPro:IPR000918); BEST Arabidopsis thaliana protein match is: Phosphoenolpyruvate carboxylase family protein (TAIR:AT1G77060.1); Has 9953 Blast hits to 7473 proteins in 1388 species: Archae - 150; Bacteria - 5572; Metazoa - 28; Fungi - 504; Plants - 171; Viruses - 0; Other Eukaryotes - 3528 (source: NCBI BLink). & (gnl|cdd|84790 : 799.0) no description available & (gnl|cdd|36474 : 451.0) no description available & (reliability: 1824.0) & (original description: Putative aceA, Description = Isocitrate lyase, PFAM = PF00463)' T '7' 'OPP' '' '' '7.1' 'OPP.oxidative PP' '' '' '7.1.1' 'OPP.oxidative PP.G6PD' 'niben044scf00016106ctg003_51722-59768' '(q43793|g6pdc_tobac : 1199.0) Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (EC 1.1.1.49) (G6PD) - Nicotiana tabacum (Common tobacco) & (at5g13110 : 958.0) Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root.; glucose-6-phosphate dehydrogenase 2 (G6PD2); CONTAINS InterPro DOMAIN/s: Glucose-6-phosphate dehydrogenase, C-terminal (InterPro:IPR022675), Glucose-6-phosphate dehydrogenase, active site (InterPro:IPR019796), NAD(P)-binding domain (InterPro:IPR016040), Glucose-6-phosphate dehydrogenase (InterPro:IPR001282), Glucose-6-phosphate dehydrogenase, NAD-binding (InterPro:IPR022674); BEST Arabidopsis thaliana protein match is: glucose-6-phosphate dehydrogenase 3 (TAIR:AT1G24280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35783 : 741.0) no description available & (gnl|cdd|81714 : 552.0) no description available & (reliability: 1916.0) & (original description: Putative g6pD, Description = Glucose-6-phosphate 1-dehydrogenase, PFAM = PF02781;PF00479)' T '7.1.1' 'OPP.oxidative PP.G6PD' 'niben101scf02007_593218-601127' '(q43793|g6pdc_tobac : 897.0) Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (EC 1.1.1.49) (G6PD) - Nicotiana tabacum (Common tobacco) & (at5g13110 : 677.0) Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root.; glucose-6-phosphate dehydrogenase 2 (G6PD2); CONTAINS InterPro DOMAIN/s: Glucose-6-phosphate dehydrogenase, C-terminal (InterPro:IPR022675), Glucose-6-phosphate dehydrogenase, active site (InterPro:IPR019796), NAD(P)-binding domain (InterPro:IPR016040), Glucose-6-phosphate dehydrogenase (InterPro:IPR001282), Glucose-6-phosphate dehydrogenase, NAD-binding (InterPro:IPR022674); BEST Arabidopsis thaliana protein match is: glucose-6-phosphate dehydrogenase 3 (TAIR:AT1G24280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35783 : 541.0) no description available & (gnl|cdd|81714 : 445.0) no description available & (reliability: 1354.0) & (original description: Putative g6pd, Description = Glucose-6-phosphate 1-dehydrogenase, PFAM = PF02781;PF02781;PF00479)' T '7.1.1' 'OPP.oxidative PP.G6PD' 'niben101scf03600_495598-503911' '(p37830|g6pd_soltu : 1018.0) Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform (EC 1.1.1.49) (G6PD) - Solanum tuberosum (Potato) & (at5g40760 : 907.0) Encodes a cytosolic glucose-6-phosphate dehydrogenase that is insensitive to reduction by DTT and whose mRNA is expressed ubiquitously.; glucose-6-phosphate dehydrogenase 6 (G6PD6); CONTAINS InterPro DOMAIN/s: Glucose-6-phosphate dehydrogenase, C-terminal (InterPro:IPR022675), Glucose-6-phosphate dehydrogenase, active site (InterPro:IPR019796), NAD(P)-binding domain (InterPro:IPR016040), Glucose-6-phosphate dehydrogenase (InterPro:IPR001282), Glucose-6-phosphate dehydrogenase, NAD-binding (InterPro:IPR022674); BEST Arabidopsis thaliana protein match is: glucose-6-phosphate dehydrogenase 5 (TAIR:AT3G27300.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35783 : 707.0) no description available & (gnl|cdd|30713 : 536.0) no description available & (reliability: 1814.0) & (original description: Putative G6PDH, Description = Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform, PFAM = PF00479;PF02781)' T '7.1.1' 'OPP.oxidative PP.G6PD' 'niben101scf05399_322922-332211' '(q43793|g6pdc_tobac : 1171.0) Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (EC 1.1.1.49) (G6PD) - Nicotiana tabacum (Common tobacco) & (at5g13110 : 955.0) Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root.; glucose-6-phosphate dehydrogenase 2 (G6PD2); CONTAINS InterPro DOMAIN/s: Glucose-6-phosphate dehydrogenase, C-terminal (InterPro:IPR022675), Glucose-6-phosphate dehydrogenase, active site (InterPro:IPR019796), NAD(P)-binding domain (InterPro:IPR016040), Glucose-6-phosphate dehydrogenase (InterPro:IPR001282), Glucose-6-phosphate dehydrogenase, NAD-binding (InterPro:IPR022674); BEST Arabidopsis thaliana protein match is: glucose-6-phosphate dehydrogenase 3 (TAIR:AT1G24280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35783 : 744.0) no description available & (gnl|cdd|81714 : 556.0) no description available & (reliability: 1910.0) & (original description: Putative g6pD, Description = Glucose-6-phosphate 1-dehydrogenase, PFAM = PF02781;PF00479)' T '7.1.1' 'OPP.oxidative PP.G6PD' 'niben101scf09871_1112-9654' '(at1g09420 : 668.0) Encodes a protein similar to glucose-6-phosphate dehydrogenase but, based on amino acid differences in the active site and lack of activity, does not encode a functional G6PDH. The amino acid sequence for the consensus sequence of the G6PDH active site (DHYLGKE) differs in three places in this protein. gc exon splice site at 20574 is based on protein alignment, and is not confirmed experimentally.; glucose-6-phosphate dehydrogenase 4 (G6PD4); FUNCTIONS IN: glucose-6-phosphate dehydrogenase activity; INVOLVED IN: oxidation reduction, glucose metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-6-phosphate dehydrogenase, C-terminal (InterPro:IPR022675), NAD(P)-binding domain (InterPro:IPR016040), Glucose-6-phosphate dehydrogenase (InterPro:IPR001282), Glucose-6-phosphate dehydrogenase, NAD-binding (InterPro:IPR022674); BEST Arabidopsis thaliana protein match is: glucose-6-phosphate dehydrogenase 2 (TAIR:AT5G13110.1). & (gnl|cdd|35783 : 546.0) no description available & (o24357|g6pdc_spiol : 515.0) Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (EC 1.1.1.49) (G6PD) - Spinacia oleracea (Spinach) & (gnl|cdd|81714 : 438.0) no description available & (reliability: 1336.0) & (original description: Putative G6PD4, Description = Glucose-6-phosphate dehydrogenase 4, PFAM = PF02781;PF00479)' T '7.1.1' 'OPP.oxidative PP.G6PD' 'niben101scf19612_211498-218918' '(q43839|g6pdc_soltu : 1070.0) Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (EC 1.1.1.49) (G6PD) - Solanum tuberosum (Potato) & (at5g35790 : 900.0) Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root.; glucose-6-phosphate dehydrogenase 1 (G6PD1); FUNCTIONS IN: glucose-6-phosphate dehydrogenase activity, protein binding; INVOLVED IN: pentose-phosphate shunt, oxidative branch, glucose metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-6-phosphate dehydrogenase, C-terminal (InterPro:IPR022675), Glucose-6-phosphate dehydrogenase, active site (InterPro:IPR019796), NAD(P)-binding domain (InterPro:IPR016040), Glucose-6-phosphate dehydrogenase (InterPro:IPR001282), Glucose-6-phosphate dehydrogenase, NAD-binding (InterPro:IPR022674); BEST Arabidopsis thaliana protein match is: glucose-6-phosphate dehydrogenase 2 (TAIR:AT5G13110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35783 : 735.0) no description available & (gnl|cdd|81714 : 555.0) no description available & (reliability: 1800.0) & (original description: Putative g6pD, Description = Glucose-6-phosphate 1-dehydrogenase, PFAM = PF02781;PF00479)' T '7.1.2' 'OPP.oxidative PP.6-phosphogluconolactonase' 'nbv0.3scaffold21121_3382-15912' '(at5g24400 : 288.0) Encodes a protein with 6-phosphoglucunolactonase activity that localizes to the chloroplasts and the peroxisome. However, mutant phenotypes observed in pgl3 mutant plants can be complemented with a chloroplast-targeted version of the protein. PGL3 likely functions in the oxidative branch of the pentose phosphate pathway. pgl3 mutant phenotypes suggest that it is important in pathogen defense and maintenance of cellular redox homeostasis.; EMBRYO DEFECTIVE 2024 (EMB2024); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: defense response to oomycetes, defense response to bacterium, carbohydrate metabolic process, cellular response to redox state, embryo development ending in seed dormancy; LOCATED IN: peroxisome, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucosamine/galactosamine-6-phosphate isomerase (InterPro:IPR006148), 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: 6-phosphogluconolactonase 2 (TAIR:AT3G49360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38357 : 249.0) no description available & (gnl|cdd|73166 : 216.0) no description available & (reliability: 576.0) & (original description: Putative 6PGL, Description = 6-phosphogluconolactonase, PFAM = PF01182)' T '7.1.2' 'OPP.oxidative PP.6-phosphogluconolactonase' 'nbv0.3scaffold36481_5017-8687' '(at1g13700 : 337.0) 6-phosphogluconolactonase 1 (PGL1); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: pentose-phosphate shunt, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT5G24400.1); Has 3744 Blast hits to 3744 proteins in 1410 species: Archae - 0; Bacteria - 2521; Metazoa - 189; Fungi - 243; Plants - 155; Viruses - 0; Other Eukaryotes - 636 (source: NCBI BLink). & (gnl|cdd|38357 : 288.0) no description available & (gnl|cdd|73166 : 248.0) no description available & (reliability: 674.0) & (original description: Putative pgl, Description = 6-phosphogluconolactonase, PFAM = PF01182)' T '7.1.2' 'OPP.oxidative PP.6-phosphogluconolactonase' 'nbv0.5scaffold2656_280914-288131' '(at5g24400 : 285.0) Encodes a protein with 6-phosphoglucunolactonase activity that localizes to the chloroplasts and the peroxisome. However, mutant phenotypes observed in pgl3 mutant plants can be complemented with a chloroplast-targeted version of the protein. PGL3 likely functions in the oxidative branch of the pentose phosphate pathway. pgl3 mutant phenotypes suggest that it is important in pathogen defense and maintenance of cellular redox homeostasis.; EMBRYO DEFECTIVE 2024 (EMB2024); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: defense response to oomycetes, defense response to bacterium, carbohydrate metabolic process, cellular response to redox state, embryo development ending in seed dormancy; LOCATED IN: peroxisome, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucosamine/galactosamine-6-phosphate isomerase (InterPro:IPR006148), 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: 6-phosphogluconolactonase 2 (TAIR:AT3G49360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38357 : 252.0) no description available & (gnl|cdd|73166 : 217.0) no description available & (reliability: 570.0) & (original description: Putative 6PGL, Description = 6-phosphogluconolactonase, PFAM = PF01182)' T '7.1.2' 'OPP.oxidative PP.6-phosphogluconolactonase' 'nbv0.5scaffold3520_80758-93755' '(at5g24400 : 303.0) Encodes a protein with 6-phosphoglucunolactonase activity that localizes to the chloroplasts and the peroxisome. However, mutant phenotypes observed in pgl3 mutant plants can be complemented with a chloroplast-targeted version of the protein. PGL3 likely functions in the oxidative branch of the pentose phosphate pathway. pgl3 mutant phenotypes suggest that it is important in pathogen defense and maintenance of cellular redox homeostasis.; EMBRYO DEFECTIVE 2024 (EMB2024); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: defense response to oomycetes, defense response to bacterium, carbohydrate metabolic process, cellular response to redox state, embryo development ending in seed dormancy; LOCATED IN: peroxisome, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucosamine/galactosamine-6-phosphate isomerase (InterPro:IPR006148), 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: 6-phosphogluconolactonase 2 (TAIR:AT3G49360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38357 : 268.0) no description available & (gnl|cdd|73166 : 225.0) no description available & (reliability: 606.0) & (original description: Putative 6PGL, Description = Glucosamine-6-phosphate isomerase/6-phosphogluconolactonase, PFAM = PF01182)' T '7.1.2' 'OPP.oxidative PP.6-phosphogluconolactonase' 'nbv0.5scaffold7014_16444-22647' '(at1g13700 : 363.0) 6-phosphogluconolactonase 1 (PGL1); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: pentose-phosphate shunt, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT5G24400.1); Has 3744 Blast hits to 3744 proteins in 1410 species: Archae - 0; Bacteria - 2521; Metazoa - 189; Fungi - 243; Plants - 155; Viruses - 0; Other Eukaryotes - 636 (source: NCBI BLink). & (gnl|cdd|38357 : 296.0) no description available & (gnl|cdd|73166 : 257.0) no description available & (reliability: 726.0) & (original description: Putative pgl, Description = Strongly similar to 6-phosphogluconolactonase, PFAM = PF01182)' T '7.1.2' 'OPP.oxidative PP.6-phosphogluconolactonase' 'niben044scf00023460ctg005_3524-5984' '(at5g24400 : 214.0) Encodes a protein with 6-phosphoglucunolactonase activity that localizes to the chloroplasts and the peroxisome. However, mutant phenotypes observed in pgl3 mutant plants can be complemented with a chloroplast-targeted version of the protein. PGL3 likely functions in the oxidative branch of the pentose phosphate pathway. pgl3 mutant phenotypes suggest that it is important in pathogen defense and maintenance of cellular redox homeostasis.; EMBRYO DEFECTIVE 2024 (EMB2024); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: defense response to oomycetes, defense response to bacterium, carbohydrate metabolic process, cellular response to redox state, embryo development ending in seed dormancy; LOCATED IN: peroxisome, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucosamine/galactosamine-6-phosphate isomerase (InterPro:IPR006148), 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: 6-phosphogluconolactonase 2 (TAIR:AT3G49360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38357 : 170.0) no description available & (gnl|cdd|73166 : 155.0) no description available & (reliability: 428.0) & (original description: Putative Pgls, Description = 6-phosphogluconolactonase, PFAM = PF01182)' T '7.1.2' 'OPP.oxidative PP.6-phosphogluconolactonase' 'niben101scf01045_85075-99619' '(at1g13700 : 301.0) 6-phosphogluconolactonase 1 (PGL1); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: pentose-phosphate shunt, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT5G24400.1); Has 3744 Blast hits to 3744 proteins in 1410 species: Archae - 0; Bacteria - 2521; Metazoa - 189; Fungi - 243; Plants - 155; Viruses - 0; Other Eukaryotes - 636 (source: NCBI BLink). & (gnl|cdd|38357 : 250.0) no description available & (gnl|cdd|73166 : 215.0) no description available & (reliability: 602.0) & (original description: Putative 6PGL, Description = 6-phosphogluconolactonase, PFAM = PF01182)' T '7.1.2' 'OPP.oxidative PP.6-phosphogluconolactonase' 'niben101scf01524_124235-131714' '(at5g24400 : 346.0) Encodes a protein with 6-phosphoglucunolactonase activity that localizes to the chloroplasts and the peroxisome. However, mutant phenotypes observed in pgl3 mutant plants can be complemented with a chloroplast-targeted version of the protein. PGL3 likely functions in the oxidative branch of the pentose phosphate pathway. pgl3 mutant phenotypes suggest that it is important in pathogen defense and maintenance of cellular redox homeostasis.; EMBRYO DEFECTIVE 2024 (EMB2024); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: defense response to oomycetes, defense response to bacterium, carbohydrate metabolic process, cellular response to redox state, embryo development ending in seed dormancy; LOCATED IN: peroxisome, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucosamine/galactosamine-6-phosphate isomerase (InterPro:IPR006148), 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: 6-phosphogluconolactonase 2 (TAIR:AT3G49360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38357 : 307.0) no description available & (gnl|cdd|73166 : 259.0) no description available & (reliability: 692.0) & (original description: Putative pgl, Description = 6-phosphogluconolactonase, PFAM = PF01182)' T '7.1.2' 'OPP.oxidative PP.6-phosphogluconolactonase' 'niben101scf01550_296-3813' '(at5g24400 : 297.0) Encodes a protein with 6-phosphoglucunolactonase activity that localizes to the chloroplasts and the peroxisome. However, mutant phenotypes observed in pgl3 mutant plants can be complemented with a chloroplast-targeted version of the protein. PGL3 likely functions in the oxidative branch of the pentose phosphate pathway. pgl3 mutant phenotypes suggest that it is important in pathogen defense and maintenance of cellular redox homeostasis.; EMBRYO DEFECTIVE 2024 (EMB2024); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: defense response to oomycetes, defense response to bacterium, carbohydrate metabolic process, cellular response to redox state, embryo development ending in seed dormancy; LOCATED IN: peroxisome, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucosamine/galactosamine-6-phosphate isomerase (InterPro:IPR006148), 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: 6-phosphogluconolactonase 2 (TAIR:AT3G49360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38357 : 268.0) no description available & (gnl|cdd|73166 : 231.0) no description available & (reliability: 594.0) & (original description: Putative At3g49360, Description = Probable 6-phosphogluconolactonase 2, PFAM = PF01182)' T '7.1.2' 'OPP.oxidative PP.6-phosphogluconolactonase' 'niben101scf02151_531762-538249' '(at1g13700 : 377.0) 6-phosphogluconolactonase 1 (PGL1); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: pentose-phosphate shunt, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT5G24400.1); Has 3744 Blast hits to 3744 proteins in 1410 species: Archae - 0; Bacteria - 2521; Metazoa - 189; Fungi - 243; Plants - 155; Viruses - 0; Other Eukaryotes - 636 (source: NCBI BLink). & (gnl|cdd|38357 : 292.0) no description available & (gnl|cdd|73166 : 249.0) no description available & (reliability: 754.0) & (original description: Putative pgl, Description = 6-phosphogluconolactonase, PFAM = PF01182)' T '7.1.2' 'OPP.oxidative PP.6-phosphogluconolactonase' 'niben101scf05414_260972-266001' '(at1g13700 : 375.0) 6-phosphogluconolactonase 1 (PGL1); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: pentose-phosphate shunt, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT5G24400.1); Has 3744 Blast hits to 3744 proteins in 1410 species: Archae - 0; Bacteria - 2521; Metazoa - 189; Fungi - 243; Plants - 155; Viruses - 0; Other Eukaryotes - 636 (source: NCBI BLink). & (gnl|cdd|38357 : 293.0) no description available & (gnl|cdd|73166 : 253.0) no description available & (reliability: 750.0) & (original description: Putative pgl, Description = 6-phosphogluconolactonase, PFAM = PF01182)' T '7.1.2' 'OPP.oxidative PP.6-phosphogluconolactonase' 'niben101scf08446_74686-88761' '(at5g24400 : 352.0) Encodes a protein with 6-phosphoglucunolactonase activity that localizes to the chloroplasts and the peroxisome. However, mutant phenotypes observed in pgl3 mutant plants can be complemented with a chloroplast-targeted version of the protein. PGL3 likely functions in the oxidative branch of the pentose phosphate pathway. pgl3 mutant phenotypes suggest that it is important in pathogen defense and maintenance of cellular redox homeostasis.; EMBRYO DEFECTIVE 2024 (EMB2024); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: defense response to oomycetes, defense response to bacterium, carbohydrate metabolic process, cellular response to redox state, embryo development ending in seed dormancy; LOCATED IN: peroxisome, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucosamine/galactosamine-6-phosphate isomerase (InterPro:IPR006148), 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: 6-phosphogluconolactonase 2 (TAIR:AT3G49360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38357 : 302.0) no description available & (gnl|cdd|73166 : 261.0) no description available & (reliability: 704.0) & (original description: Putative pgl, Description = 6-phosphogluconolactonase, PFAM = PF01182)' T '7.1.3' 'OPP.oxidative PP.6-phosphogluconate dehydrogenase' 'niben101scf00043_410869-414338' '(at3g02360 : 887.0) 6-phosphogluconate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: response to salt stress; LOCATED IN: peroxisome; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, decarboxylating (InterPro:IPR006113), 6-phosphogluconate dehydrogenase, C-terminal (InterPro:IPR006114), 6-phosphogluconate dehydrogenase (InterPro:IPR006183), NAD(P)-binding domain (InterPro:IPR016040), Fibritin/6-phosphogluconate dehydrogenase, C-terminal extension (InterPro:IPR012284); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT5G41670.2); Has 12208 Blast hits to 12120 proteins in 2600 species: Archae - 108; Bacteria - 8004; Metazoa - 655; Fungi - 226; Plants - 316; Viruses - 4; Other Eukaryotes - 2895 (source: NCBI BLink). & (gnl|cdd|37864 : 756.0) no description available & (gnl|cdd|82915 : 718.0) no description available & (reliability: 1774.0) & (original description: Putative gnd, Description = 6-phosphogluconate dehydrogenase, decarboxylating, PFAM = PF00393;PF03446)' T '7.1.3' 'OPP.oxidative PP.6-phosphogluconate dehydrogenase' 'niben101scf01513_185158-189449' '(at3g25530 : 422.0) Encodes gamma-hydroxybutyrate dehydrogenase (AtGHBDH). Contains a NADP-binding domain. GHBDH is proposed to function in oxidative stress tolerance.; glyoxylate reductase 1 (GLYR1); FUNCTIONS IN: 3-hydroxybutyrate dehydrogenase activity, phosphogluconate dehydrogenase (decarboxylating) activity; INVOLVED IN: response to oxidative stress; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyisobutyrate dehydrogenase-related, conserved site (InterPro:IPR002204); BEST Arabidopsis thaliana protein match is: glyoxylate reductase 2 (TAIR:AT1G17650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35630 : 339.0) no description available & (gnl|cdd|32267 : 250.0) no description available & (reliability: 844.0) & (original description: Putative GLYR1, Description = Glyoxylate/succinic semialdehyde reductase 1, PFAM = PF03446;PF14833)' T '7.1.3' 'OPP.oxidative PP.6-phosphogluconate dehydrogenase' 'niben101scf01538_49825-52730' '(at1g71170 : 302.0) 6-phosphogluconate dehydrogenase family protein; FUNCTIONS IN: coenzyme binding, oxidoreductase activity, binding, phosphogluconate dehydrogenase (decarboxylating) activity, catalytic activity; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT1G71180.1); Has 15315 Blast hits to 15291 proteins in 2047 species: Archae - 135; Bacteria - 9501; Metazoa - 307; Fungi - 346; Plants - 270; Viruses - 0; Other Eukaryotes - 4756 (source: NCBI BLink). & (gnl|cdd|35630 : 291.0) no description available & (gnl|cdd|32267 : 246.0) no description available & (reliability: 604.0) & (original description: Putative garR, Description = 2-hydroxy-3-oxopropionate reductase, PFAM = PF03446;PF14833)' T '7.1.3' 'OPP.oxidative PP.6-phosphogluconate dehydrogenase' 'niben101scf06562_11747-14799' '(at4g29120 : 421.0) 6-phosphogluconate dehydrogenase family protein; FUNCTIONS IN: coenzyme binding, oxidoreductase activity, phosphogluconate dehydrogenase (decarboxylating) activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT1G71170.1); Has 17656 Blast hits to 17632 proteins in 2309 species: Archae - 156; Bacteria - 10896; Metazoa - 453; Fungi - 508; Plants - 334; Viruses - 3; Other Eukaryotes - 5306 (source: NCBI BLink). & (gnl|cdd|35630 : 328.0) no description available & (gnl|cdd|32267 : 279.0) no description available & (reliability: 842.0) & (original description: Putative garR, Description = 2-hydroxy-3-oxopropionate reductase, PFAM = PF14833;PF03446)' T '7.1.3' 'OPP.oxidative PP.6-phosphogluconate dehydrogenase' 'niben101scf08127_782575-786026' '(at3g02360 : 864.0) 6-phosphogluconate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: response to salt stress; LOCATED IN: peroxisome; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, decarboxylating (InterPro:IPR006113), 6-phosphogluconate dehydrogenase, C-terminal (InterPro:IPR006114), 6-phosphogluconate dehydrogenase (InterPro:IPR006183), NAD(P)-binding domain (InterPro:IPR016040), Fibritin/6-phosphogluconate dehydrogenase, C-terminal extension (InterPro:IPR012284); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT5G41670.2); Has 12208 Blast hits to 12120 proteins in 2600 species: Archae - 108; Bacteria - 8004; Metazoa - 655; Fungi - 226; Plants - 316; Viruses - 4; Other Eukaryotes - 2895 (source: NCBI BLink). & (gnl|cdd|37864 : 759.0) no description available & (gnl|cdd|82915 : 711.0) no description available & (reliability: 1728.0) & (original description: Putative gnd, Description = 6-phosphogluconate dehydrogenase, decarboxylating, PFAM = PF03446;PF00393)' T '7.1.3' 'OPP.oxidative PP.6-phosphogluconate dehydrogenase' 'niben101scf10613_69277-72731' '(at3g02360 : 863.0) 6-phosphogluconate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: response to salt stress; LOCATED IN: peroxisome; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, decarboxylating (InterPro:IPR006113), 6-phosphogluconate dehydrogenase, C-terminal (InterPro:IPR006114), 6-phosphogluconate dehydrogenase (InterPro:IPR006183), NAD(P)-binding domain (InterPro:IPR016040), Fibritin/6-phosphogluconate dehydrogenase, C-terminal extension (InterPro:IPR012284); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT5G41670.2); Has 12208 Blast hits to 12120 proteins in 2600 species: Archae - 108; Bacteria - 8004; Metazoa - 655; Fungi - 226; Plants - 316; Viruses - 4; Other Eukaryotes - 2895 (source: NCBI BLink). & (gnl|cdd|37864 : 760.0) no description available & (gnl|cdd|82915 : 718.0) no description available & (reliability: 1726.0) & (original description: Putative gnd, Description = 6-phosphogluconate dehydrogenase, decarboxylating, PFAM = PF03446;PF00393)' T '7.1.3' 'OPP.oxidative PP.6-phosphogluconate dehydrogenase' 'niben101scf17140_53805-57289' '(at5g41670 : 827.0) 6-phosphogluconate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: response to fructose stimulus, response to cadmium ion, response to sucrose stimulus, response to glucose stimulus; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, decarboxylating (InterPro:IPR006113), 6-phosphogluconate dehydrogenase, C-terminal (InterPro:IPR006114), 6-phosphogluconate dehydrogenase (InterPro:IPR006183), NAD(P)-binding domain (InterPro:IPR016040), Fibritin/6-phosphogluconate dehydrogenase, C-terminal extension (InterPro:IPR012284); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT1G64190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37864 : 724.0) no description available & (gnl|cdd|82915 : 691.0) no description available & (reliability: 1654.0) & (original description: Putative gnd, Description = 6-phosphogluconate dehydrogenase, decarboxylating, PFAM = PF03446;PF00393)' T '7.1.1001' 'OPP.oxidative PP' 'gluconate-6-p' 'OPP.oxidative PP' M '7.2' 'OPP.non-reductive PP' '' '' '7.2.1' 'OPP.non-reductive PP.transketolase' 'nbv0.3scaffold59808_1021-7340' '(q43848|tktc_soltu : 1284.0) Transketolase, chloroplast precursor (EC 2.2.1.1) (TK) - Solanum tuberosum (Potato) & (at2g45290 : 1196.0) Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, bacterial-like (InterPro:IPR005478), Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT3G60750.1); Has 19460 Blast hits to 19400 proteins in 2776 species: Archae - 200; Bacteria - 11520; Metazoa - 310; Fungi - 312; Plants - 211; Viruses - 0; Other Eukaryotes - 6907 (source: NCBI BLink). & (gnl|cdd|30371 : 1001.0) no description available & (gnl|cdd|35743 : 755.0) no description available & (reliability: 2392.0) & (original description: Putative cbbT, Description = Transketolase, PFAM = PF00456;PF02780;PF02779)' T '7.2.1' 'OPP.non-reductive PP.transketolase' 'nbv0.5scaffold3829_360668-368805' '(gnl|cdd|30371 : 849.0) no description available & (at3g60750 : 760.0) Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826), Transketolase, bacterial-like (InterPro:IPR005478), Transketolase-like, C-terminal (InterPro:IPR015941); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT2G45290.1). & (q43848|tktc_soltu : 756.0) Transketolase, chloroplast precursor (EC 2.2.1.1) (TK) - Solanum tuberosum (Potato) & (gnl|cdd|35743 : 570.0) no description available & (reliability: 1520.0) & (original description: Putative cbbT, Description = Transketolase, PFAM = PF02779;PF02780;PF00456)' T '7.2.1' 'OPP.non-reductive PP.transketolase' 'nbv0.5scaffold6578_45542-52464' '(q43848|tktc_soltu : 1267.0) Transketolase, chloroplast precursor (EC 2.2.1.1) (TK) - Solanum tuberosum (Potato) & (at2g45290 : 1187.0) Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, bacterial-like (InterPro:IPR005478), Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT3G60750.1); Has 19460 Blast hits to 19400 proteins in 2776 species: Archae - 200; Bacteria - 11520; Metazoa - 310; Fungi - 312; Plants - 211; Viruses - 0; Other Eukaryotes - 6907 (source: NCBI BLink). & (gnl|cdd|30371 : 1011.0) no description available & (gnl|cdd|35743 : 761.0) no description available & (reliability: 2374.0) & (original description: Putative cbbT, Description = Transketolase, PFAM = PF02779;PF02780;PF00456)' T '7.2.1' 'OPP.non-reductive PP.transketolase' 'niben044scf00008412ctg007_1064-7782' '(q43848|tktc_soltu : 1246.0) Transketolase, chloroplast precursor (EC 2.2.1.1) (TK) - Solanum tuberosum (Potato) & (at3g60750 : 1181.0) Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826), Transketolase, bacterial-like (InterPro:IPR005478), Transketolase-like, C-terminal (InterPro:IPR015941); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT2G45290.1). & (gnl|cdd|30371 : 1001.0) no description available & (gnl|cdd|35743 : 756.0) no description available & (reliability: 2362.0) & (original description: Putative cbbT, Description = Transketolase, PFAM = PF02780;PF00456;PF02779)' T '7.2.1' 'OPP.non-reductive PP.transketolase' 'niben044scf00013564ctg004_1467-8064' '(gnl|cdd|30371 : 834.0) no description available & (at3g60750 : 743.0) Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826), Transketolase, bacterial-like (InterPro:IPR005478), Transketolase-like, C-terminal (InterPro:IPR015941); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT2G45290.1). & (q43848|tktc_soltu : 737.0) Transketolase, chloroplast precursor (EC 2.2.1.1) (TK) - Solanum tuberosum (Potato) & (gnl|cdd|35743 : 557.0) no description available & (reliability: 1486.0) & (original description: Putative cbbT, Description = Transketolase, PFAM = PF00456;PF02779)' T '7.2.2' 'OPP.non-reductive PP.transaldolase' 'niben101scf00986_96078-102093' '(at5g13420 : 633.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: catalytic activity, transaldolase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transaldolase subfamily (InterPro:IPR004732), Aldolase-type TIM barrel (InterPro:IPR013785), Transaldolase, active site (InterPro:IPR018225), Transaldolase, bacterial/plant type (InterPro:IPR014634), Transaldolase (InterPro:IPR001585); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81124 : 483.0) no description available & (gnl|cdd|37983 : 304.0) no description available & (reliability: 1266.0) & (original description: Putative tal, Description = Transaldolase, PFAM = PF00923)' T '7.2.2' 'OPP.non-reductive PP.transaldolase' 'niben101scf01818_671741-678026' '(at5g13420 : 631.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: catalytic activity, transaldolase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transaldolase subfamily (InterPro:IPR004732), Aldolase-type TIM barrel (InterPro:IPR013785), Transaldolase, active site (InterPro:IPR018225), Transaldolase, bacterial/plant type (InterPro:IPR014634), Transaldolase (InterPro:IPR001585); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81124 : 485.0) no description available & (gnl|cdd|37983 : 308.0) no description available & (reliability: 1262.0) & (original description: Putative tal, Description = Transaldolase, PFAM = PF00923)' T '7.2.2' 'OPP.non-reductive PP.transaldolase' 'niben101scf03167_166746-190442' '(at1g12230 : 535.0) Aldolase superfamily protein; FUNCTIONS IN: transaldolase activity, zinc ion binding; INVOLVED IN: carbohydrate metabolic process, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Transaldolase (InterPro:IPR001585). & (gnl|cdd|29950 : 351.0) no description available & (gnl|cdd|37983 : 315.0) no description available & (reliability: 1070.0) & (original description: Putative At1g12230, Description = Transaldolase-like protein, PFAM = PF00923)' T '7.2.3' 'OPP.non-reductive PP.ribulose-phosphate 3-epimerase' 'nbv0.5scaffold1116_242805-297596' '(q9se42|rpe1_orysa : 369.0) Ribulose-phosphate 3-epimerase, cytoplasmic isoform (EC 5.1.3.1) (Ribulose-5-phosphate-epimerase) (Cyt-RPEase) (RPEcyt) (Pentose-5-phosphate 3-epimerase) (PPE) - Oryza sativa (Rice) & (at3g01850 : 357.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: ribulose-phosphate 3-epimerase activity, catalytic activity; INVOLVED IN: carbohydrate metabolic process, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate 3-epimerase (InterPro:IPR000056), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT1G63290.1); Has 9076 Blast hits to 9073 proteins in 2640 species: Archae - 49; Bacteria - 5613; Metazoa - 177; Fungi - 138; Plants - 141; Viruses - 0; Other Eukaryotes - 2958 (source: NCBI BLink). & (gnl|cdd|38321 : 332.0) no description available & (gnl|cdd|73366 : 295.0) no description available & (reliability: 714.0) & (original description: Putative rpe, Description = Ribulose-phosphate 3-epimerase, PFAM = PF00834)' T '7.2.3' 'OPP.non-reductive PP.ribulose-phosphate 3-epimerase' 'niben101scf01945_103497-120212' '(q9se42|rpe1_orysa : 367.0) Ribulose-phosphate 3-epimerase, cytoplasmic isoform (EC 5.1.3.1) (Ribulose-5-phosphate-epimerase) (Cyt-RPEase) (RPEcyt) (Pentose-5-phosphate 3-epimerase) (PPE) - Oryza sativa (Rice) & (at3g01850 : 358.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: ribulose-phosphate 3-epimerase activity, catalytic activity; INVOLVED IN: carbohydrate metabolic process, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate 3-epimerase (InterPro:IPR000056), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT1G63290.1); Has 9076 Blast hits to 9073 proteins in 2640 species: Archae - 49; Bacteria - 5613; Metazoa - 177; Fungi - 138; Plants - 141; Viruses - 0; Other Eukaryotes - 2958 (source: NCBI BLink). & (gnl|cdd|38321 : 331.0) no description available & (gnl|cdd|73366 : 296.0) no description available & (reliability: 716.0) & (original description: Putative rpe, Description = Ribulose-phosphate 3-epimerase, PFAM = PF00834)' T '7.2.4' 'OPP.non-reductive PP.ribose 5-phosphate isomerase' 'nbv0.5scaffold6203_45393-49010' '(at3g04790 : 326.0) Ribose 5-phosphate isomerase, type A protein; FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: defense response to bacterium, reductive pentose-phosphate cycle; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: ribose-5-phosphate isomerase 2 (TAIR:AT2G01290.1); Has 5044 Blast hits to 5043 proteins in 1956 species: Archae - 235; Bacteria - 3572; Metazoa - 110; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 841 (source: NCBI BLink). & (gnl|cdd|38285 : 263.0) no description available & (gnl|cdd|73164 : 257.0) no description available & (reliability: 652.0) & (original description: Putative RPI3, Description = Probable ribose-5-phosphate isomerase 3, chloroplastic, PFAM = PF06026)' T '7.2.4' 'OPP.non-reductive PP.ribose 5-phosphate isomerase' 'niben044scf00024842ctg001_2488-5153' '(at1g71100 : 314.0) Encodes a ribose 5-phosphate isomerase involved in the formation of uridine used for the synthesis of UDP-sugars. Mutants of this gene are affected in cellulose biosynthesis.; RADIAL SWELLING 10 (RSW10); FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: uridine biosynthetic process, response to karrikin, cellulose biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: ribose-5-phosphate isomerase 2 (TAIR:AT2G01290.1); Has 5045 Blast hits to 5045 proteins in 1956 species: Archae - 235; Bacteria - 3584; Metazoa - 111; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 829 (source: NCBI BLink). & (gnl|cdd|38285 : 254.0) no description available & (gnl|cdd|73164 : 244.0) no description available & (reliability: 628.0) & (original description: Putative RPI1, Description = Probable ribose-5-phosphate isomerase 1, PFAM = PF06026)' T '7.2.4' 'OPP.non-reductive PP.ribose 5-phosphate isomerase' 'niben101scf00271_686755-692433' '(at5g44520 : 289.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: glucose catabolic process to lactate and acetate, 5-phosphoribose 1-diphosphate biosynthetic process, reductive pentose-phosphate cycle, D-ribose catabolic process, pentose-phosphate shunt, non-oxidative branch; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: Ribose 5-phosphate isomerase, type A protein (TAIR:AT3G04790.1); Has 2560 Blast hits to 2560 proteins in 1021 species: Archae - 184; Bacteria - 1763; Metazoa - 86; Fungi - 39; Plants - 144; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink). & (gnl|cdd|38285 : 178.0) no description available & (gnl|cdd|73164 : 154.0) no description available & (reliability: 578.0) & (original description: Putative RPI4, Description = Probable ribose-5-phosphate isomerase 4, chloroplastic, PFAM = PF06026)' T '7.2.4' 'OPP.non-reductive PP.ribose 5-phosphate isomerase' 'niben101scf01534_78148-81005' '(at3g04790 : 323.0) Ribose 5-phosphate isomerase, type A protein; FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: defense response to bacterium, reductive pentose-phosphate cycle; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: ribose-5-phosphate isomerase 2 (TAIR:AT2G01290.1); Has 5044 Blast hits to 5043 proteins in 1956 species: Archae - 235; Bacteria - 3572; Metazoa - 110; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 841 (source: NCBI BLink). & (gnl|cdd|38285 : 264.0) no description available & (gnl|cdd|73164 : 260.0) no description available & (reliability: 646.0) & (original description: Putative RPI3, Description = Probable ribose-5-phosphate isomerase 3, chloroplastic, PFAM = PF06026)' T '7.2.4' 'OPP.non-reductive PP.ribose 5-phosphate isomerase' 'niben101scf01837_311544-313965' '(at2g01290 : 130.0) Cytosolic ribose-5-phosphate isomerase. Knockout mutation causes chloroplast dysfunction, late flowering and premature cell death.; ribose-5-phosphate isomerase 2 (RPI2); CONTAINS InterPro DOMAIN/s: Ribose-5-phosphate isomerase, type A, subgroup (InterPro:IPR020672), Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: Ribose 5-phosphate isomerase, type A protein (TAIR:AT1G71100.1); Has 5035 Blast hits to 5035 proteins in 1937 species: Archae - 235; Bacteria - 3542; Metazoa - 112; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 860 (source: NCBI BLink). & (gnl|cdd|38285 : 106.0) no description available & (gnl|cdd|87006 : 92.9) no description available & (reliability: 244.0) & (original description: Putative rpi, Description = Putative ribose-5-phosphate isomerase, PFAM = PF06026)' T '7.2.4' 'OPP.non-reductive PP.ribose 5-phosphate isomerase' 'niben101scf01837_311666-314451' '(at1g71100 : 344.0) Encodes a ribose 5-phosphate isomerase involved in the formation of uridine used for the synthesis of UDP-sugars. Mutants of this gene are affected in cellulose biosynthesis.; RADIAL SWELLING 10 (RSW10); FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: uridine biosynthetic process, response to karrikin, cellulose biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: ribose-5-phosphate isomerase 2 (TAIR:AT2G01290.1); Has 5045 Blast hits to 5045 proteins in 1956 species: Archae - 235; Bacteria - 3584; Metazoa - 111; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 829 (source: NCBI BLink). & (gnl|cdd|38285 : 269.0) no description available & (gnl|cdd|73164 : 257.0) no description available & (reliability: 688.0) & (original description: Putative RPI1, Description = Probable ribose-5-phosphate isomerase 1, PFAM = PF06026)' T '7.2.4' 'OPP.non-reductive PP.ribose 5-phosphate isomerase' 'niben101scf01837_312098-318449' '(at1g71100 : 155.0) Encodes a ribose 5-phosphate isomerase involved in the formation of uridine used for the synthesis of UDP-sugars. Mutants of this gene are affected in cellulose biosynthesis.; RADIAL SWELLING 10 (RSW10); FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: uridine biosynthetic process, response to karrikin, cellulose biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: ribose-5-phosphate isomerase 2 (TAIR:AT2G01290.1); Has 5045 Blast hits to 5045 proteins in 1956 species: Archae - 235; Bacteria - 3584; Metazoa - 111; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 829 (source: NCBI BLink). & (gnl|cdd|38285 : 121.0) no description available & (gnl|cdd|73164 : 115.0) no description available & (reliability: 310.0) & (original description: Putative rpi, Description = Ribose-5-phosphate isomerase A, PFAM = PF06026)' T '7.2.4' 'OPP.non-reductive PP.ribose 5-phosphate isomerase' 'niben101scf02792_177429-183581' '(at3g04790 : 311.0) Ribose 5-phosphate isomerase, type A protein; FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: defense response to bacterium, reductive pentose-phosphate cycle; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: ribose-5-phosphate isomerase 2 (TAIR:AT2G01290.1); Has 5044 Blast hits to 5043 proteins in 1956 species: Archae - 235; Bacteria - 3572; Metazoa - 110; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 841 (source: NCBI BLink). & (gnl|cdd|38285 : 262.0) no description available & (gnl|cdd|73164 : 256.0) no description available & (reliability: 622.0) & (original description: Putative rpi, Description = Ribose-5-phosphate isomerase A, PFAM = PF06026;PF06026)' T '7.2.4' 'OPP.non-reductive PP.ribose 5-phosphate isomerase' 'niben101scf09989_183843-186649' '(at2g01290 : 343.0) Cytosolic ribose-5-phosphate isomerase. Knockout mutation causes chloroplast dysfunction, late flowering and premature cell death.; ribose-5-phosphate isomerase 2 (RPI2); CONTAINS InterPro DOMAIN/s: Ribose-5-phosphate isomerase, type A, subgroup (InterPro:IPR020672), Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: Ribose 5-phosphate isomerase, type A protein (TAIR:AT1G71100.1); Has 5035 Blast hits to 5035 proteins in 1937 species: Archae - 235; Bacteria - 3542; Metazoa - 112; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 860 (source: NCBI BLink). & (gnl|cdd|38285 : 277.0) no description available & (gnl|cdd|73164 : 260.0) no description available & (reliability: 676.0) & (original description: Putative RPI2, Description = Probable ribose-5-phosphate isomerase 2, PFAM = PF06026)' T '7.3' 'OPP.electron transfer' 'niben044scf00022507ctg003_50622-53302' '(at2g27510 : 168.0) ferredoxin 3 (FD3); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: electron transport chain; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), Ferredoxin (InterPro:IPR001041), Ferredoxin [2Fe-2S], plant (InterPro:IPR010241), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: 2Fe-2S ferredoxin-like superfamily protein (TAIR:AT1G60950.1); Has 7538 Blast hits to 7536 proteins in 1339 species: Archae - 137; Bacteria - 5569; Metazoa - 7; Fungi - 12; Plants - 623; Viruses - 5; Other Eukaryotes - 1185 (source: NCBI BLink). & (p27788|fer3_maize : 156.0) Ferredoxin-3, chloroplast precursor (Ferredoxin III) (Fd III) - Zea mays (Maize) & (gnl|cdd|79346 : 136.0) no description available & (reliability: 336.0) & (original description: Putative FD3, Description = Ferredoxin-3, chloroplastic, PFAM = PF00111)' T '7.3' 'OPP.electron transfer' 'niben101scf01920_108519-110968' '(at2g27510 : 168.0) ferredoxin 3 (FD3); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: electron transport chain; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), Ferredoxin (InterPro:IPR001041), Ferredoxin [2Fe-2S], plant (InterPro:IPR010241), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: 2Fe-2S ferredoxin-like superfamily protein (TAIR:AT1G60950.1); Has 7538 Blast hits to 7536 proteins in 1339 species: Archae - 137; Bacteria - 5569; Metazoa - 7; Fungi - 12; Plants - 623; Viruses - 5; Other Eukaryotes - 1185 (source: NCBI BLink). & (p27788|fer3_maize : 155.0) Ferredoxin-3, chloroplast precursor (Ferredoxin III) (Fd III) - Zea mays (Maize) & (gnl|cdd|79346 : 135.0) no description available & (reliability: 336.0) & (original description: Putative FD3, Description = Ferredoxin-3, chloroplastic, PFAM = PF00111)' T '7.3' 'OPP.electron transfer' 'niben101scf02510_476379-478828' '(p27788|fer3_maize : 175.0) Ferredoxin-3, chloroplast precursor (Ferredoxin III) (Fd III) - Zea mays (Maize) & (at2g27510 : 172.0) ferredoxin 3 (FD3); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: electron transport chain; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), Ferredoxin (InterPro:IPR001041), Ferredoxin [2Fe-2S], plant (InterPro:IPR010241), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: 2Fe-2S ferredoxin-like superfamily protein (TAIR:AT1G60950.1); Has 7538 Blast hits to 7536 proteins in 1339 species: Archae - 137; Bacteria - 5569; Metazoa - 7; Fungi - 12; Plants - 623; Viruses - 5; Other Eukaryotes - 1185 (source: NCBI BLink). & (gnl|cdd|79346 : 140.0) no description available & (reliability: 344.0) & (original description: Putative FDX3, Description = Ferredoxin-3, chloroplastic, PFAM = PF00111)' T '7.3' 'OPP.electron transfer' 'niben101scf03282_778483-785547' '(o04397|fenr2_tobac : 730.0) Ferredoxin--NADP reductase, root-type isozyme, chloroplast precursor (EC 1.18.1.2) (FNR) - Nicotiana tabacum (Common tobacco) & (at1g30510 : 592.0) Encodes a root-type ferredoxin:NADP(H) oxidoreductase.; root FNR 2 (RFNR2); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Ferredoxin--NADP reductase (InterPro:IPR012146), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferredoxin Reductase (InterPro:IPR015701), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709); BEST Arabidopsis thaliana protein match is: root FNR 1 (TAIR:AT4G05390.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36373 : 269.0) no description available & (gnl|cdd|30718 : 180.0) no description available & (reliability: 1184.0) & (original description: Putative fnr, Description = Ferredoxin--NADP reductase, PFAM = PF00175)' T '7.3' 'OPP.electron transfer' 'niben101scf03377_690799-693251' '(at2g27510 : 164.0) ferredoxin 3 (FD3); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: electron transport chain; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), Ferredoxin (InterPro:IPR001041), Ferredoxin [2Fe-2S], plant (InterPro:IPR010241), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: 2Fe-2S ferredoxin-like superfamily protein (TAIR:AT1G60950.1); Has 7538 Blast hits to 7536 proteins in 1339 species: Archae - 137; Bacteria - 5569; Metazoa - 7; Fungi - 12; Plants - 623; Viruses - 5; Other Eukaryotes - 1185 (source: NCBI BLink). & (p27788|fer3_maize : 155.0) Ferredoxin-3, chloroplast precursor (Ferredoxin III) (Fd III) - Zea mays (Maize) & (gnl|cdd|79346 : 128.0) no description available & (reliability: 328.0) & (original description: Putative fdx5, Description = Ferredoxin I, PFAM = PF00111)' T '7.3' 'OPP.electron transfer' 'niben101scf04134_224366-226818' '(p27788|fer3_maize : 180.0) Ferredoxin-3, chloroplast precursor (Ferredoxin III) (Fd III) - Zea mays (Maize) & (at2g27510 : 174.0) ferredoxin 3 (FD3); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: electron transport chain; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), Ferredoxin (InterPro:IPR001041), Ferredoxin [2Fe-2S], plant (InterPro:IPR010241), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: 2Fe-2S ferredoxin-like superfamily protein (TAIR:AT1G60950.1); Has 7538 Blast hits to 7536 proteins in 1339 species: Archae - 137; Bacteria - 5569; Metazoa - 7; Fungi - 12; Plants - 623; Viruses - 5; Other Eukaryotes - 1185 (source: NCBI BLink). & (gnl|cdd|79346 : 141.0) no description available & (reliability: 348.0) & (original description: Putative FDX3, Description = Ferredoxin-3, chloroplastic, PFAM = PF00111)' T '7.3' 'OPP.electron transfer' 'niben101scf07284_375439-377888' '(at2g27510 : 172.0) ferredoxin 3 (FD3); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: electron transport chain; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), Ferredoxin (InterPro:IPR001041), Ferredoxin [2Fe-2S], plant (InterPro:IPR010241), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: 2Fe-2S ferredoxin-like superfamily protein (TAIR:AT1G60950.1); Has 7538 Blast hits to 7536 proteins in 1339 species: Archae - 137; Bacteria - 5569; Metazoa - 7; Fungi - 12; Plants - 623; Viruses - 5; Other Eukaryotes - 1185 (source: NCBI BLink). & (p27788|fer3_maize : 171.0) Ferredoxin-3, chloroplast precursor (Ferredoxin III) (Fd III) - Zea mays (Maize) & (gnl|cdd|79346 : 142.0) no description available & (reliability: 344.0) & (original description: Putative petF, Description = Ferredoxin-1, PFAM = PF00111)' T '7.3' 'OPP.electron transfer' 'niben101scf09005_27952-35001' '(o04397|fenr2_tobac : 700.0) Ferredoxin--NADP reductase, root-type isozyme, chloroplast precursor (EC 1.18.1.2) (FNR) - Nicotiana tabacum (Common tobacco) & (at1g30510 : 574.0) Encodes a root-type ferredoxin:NADP(H) oxidoreductase.; root FNR 2 (RFNR2); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Ferredoxin--NADP reductase (InterPro:IPR012146), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferredoxin Reductase (InterPro:IPR015701), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709); BEST Arabidopsis thaliana protein match is: root FNR 1 (TAIR:AT4G05390.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36373 : 268.0) no description available & (gnl|cdd|30718 : 179.0) no description available & (reliability: 1148.0) & (original description: Putative fnr, Description = Ferredoxin--NADP reductase, PFAM = PF00175)' T '7.3' 'OPP.electron transfer' 'niben101scf12738_76251-78700' '(at2g27510 : 167.0) ferredoxin 3 (FD3); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: electron transport chain; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), Ferredoxin (InterPro:IPR001041), Ferredoxin [2Fe-2S], plant (InterPro:IPR010241), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: 2Fe-2S ferredoxin-like superfamily protein (TAIR:AT1G60950.1); Has 7538 Blast hits to 7536 proteins in 1339 species: Archae - 137; Bacteria - 5569; Metazoa - 7; Fungi - 12; Plants - 623; Viruses - 5; Other Eukaryotes - 1185 (source: NCBI BLink). & (p27788|fer3_maize : 155.0) Ferredoxin-3, chloroplast precursor (Ferredoxin III) (Fd III) - Zea mays (Maize) & (gnl|cdd|79346 : 128.0) no description available & (reliability: 334.0) & (original description: Putative fdxV, Description = Ferredoxin, PFAM = PF00111)' T '8' 'TCA / org transformation' '' '' '8.1' 'TCA / org transformation.TCA' '' '' '8.1.1' 'TCA / org transformation.TCA.pyruvate DH' '' '' '8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'nbv0.3scaffold322_129476-137593' '(at2g34590 : 648.0) Transketolase family protein; FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, zinc ion binding, transketolase activity; INVOLVED IN: pollen tube development; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 14271 Blast hits to 14261 proteins in 2406 species: Archae - 196; Bacteria - 9106; Metazoa - 476; Fungi - 223; Plants - 259; Viruses - 0; Other Eukaryotes - 4011 (source: NCBI BLink). & (gnl|cdd|79356 : 593.0) no description available & (gnl|cdd|35744 : 514.0) no description available & (q9mur4|odpb_mesvi : 421.0) Pyruvate dehydrogenase E1 component subunit beta (EC 1.2.4.1) - Mesostigma viride & (reliability: 1270.0) & (original description: Putative pdhB, Description = Pyruvate dehydrogenase E1 component beta subunit, PFAM = PF02779;PF02780)' T '8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'nbv0.3scaffold48619_8256-15044' '(p52904|odpb_pea : 572.0) Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) - Pisum sativum (Garden pea) & (at5g50850 : 567.0) MACCI-BOU (MAB1); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, catalytic activity; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 17839 Blast hits to 17830 proteins in 2804 species: Archae - 215; Bacteria - 11375; Metazoa - 619; Fungi - 227; Plants - 405; Viruses - 0; Other Eukaryotes - 4998 (source: NCBI BLink). & (gnl|cdd|35744 : 549.0) no description available & (gnl|cdd|84022 : 529.0) no description available & (reliability: 1134.0) & (original description: Putative acoB, Description = Pyruvate dehydrogenase E1 component subunit beta, mitochondrial, PFAM = PF02779;PF02780)' T '8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'nbv0.5scaffold300_425015-439189' '(at5g50850 : 582.0) MACCI-BOU (MAB1); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, catalytic activity; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 17839 Blast hits to 17830 proteins in 2804 species: Archae - 215; Bacteria - 11375; Metazoa - 619; Fungi - 227; Plants - 405; Viruses - 0; Other Eukaryotes - 4998 (source: NCBI BLink). & (p52904|odpb_pea : 580.0) Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) - Pisum sativum (Garden pea) & (gnl|cdd|35744 : 548.0) no description available & (gnl|cdd|84022 : 530.0) no description available & (reliability: 1164.0) & (original description: Putative acoB, Description = Pyruvate dehydrogenase E1 component subunit beta, mitochondrial, PFAM = PF02780;PF02779)' T '8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'nbv0.5scaffold6350_3150-14865' '(at5g50850 : 580.0) MACCI-BOU (MAB1); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, catalytic activity; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 17839 Blast hits to 17830 proteins in 2804 species: Archae - 215; Bacteria - 11375; Metazoa - 619; Fungi - 227; Plants - 405; Viruses - 0; Other Eukaryotes - 4998 (source: NCBI BLink). & (p52904|odpb_pea : 573.0) Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) - Pisum sativum (Garden pea) & (gnl|cdd|35744 : 545.0) no description available & (gnl|cdd|84022 : 529.0) no description available & (reliability: 1160.0) & (original description: Putative acoB, Description = Pyruvate dehydrogenase E1 component subunit beta, mitochondrial, PFAM = PF02780;PF02779)' T '8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'niben044scf00019709ctg009_731-7523' '(at5g50850 : 578.0) MACCI-BOU (MAB1); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, catalytic activity; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 17839 Blast hits to 17830 proteins in 2804 species: Archae - 215; Bacteria - 11375; Metazoa - 619; Fungi - 227; Plants - 405; Viruses - 0; Other Eukaryotes - 4998 (source: NCBI BLink). & (p52904|odpb_pea : 577.0) Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) - Pisum sativum (Garden pea) & (gnl|cdd|35744 : 553.0) no description available & (gnl|cdd|84022 : 537.0) no description available & (reliability: 1156.0) & (original description: Putative acoB, Description = Pyruvate dehydrogenase E1 component subunit beta, mitochondrial, PFAM = PF02780;PF02779)' T '8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'niben101scf00161_26881-51582' '(at5g50850 : 588.0) MACCI-BOU (MAB1); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, catalytic activity; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 17839 Blast hits to 17830 proteins in 2804 species: Archae - 215; Bacteria - 11375; Metazoa - 619; Fungi - 227; Plants - 405; Viruses - 0; Other Eukaryotes - 4998 (source: NCBI BLink). & (p52904|odpb_pea : 584.0) Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) - Pisum sativum (Garden pea) & (gnl|cdd|35744 : 549.0) no description available & (gnl|cdd|84022 : 527.0) no description available & (reliability: 1176.0) & (original description: Putative acoB, Description = Pyruvate dehydrogenase E1 component subunit beta, mitochondrial, PFAM = PF02779;PF02780)' T '8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'niben101scf01577_176683-185556' '(p52903|odpa_soltu : 730.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Solanum tuberosum (Potato) & (at1g59900 : 662.0) encodes the e1 alpha subunit of the pyruvate dehydrogenase complex (PDC); pyruvate dehydrogenase complex E1 alpha subunit (E1 ALPHA); FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, pyruvate dehydrogenase (acetyl-transferring) activity; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: cytosol, mitochondrion, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017), Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y (InterPro:IPR017597); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT1G24180.1); Has 9893 Blast hits to 9890 proteins in 1845 species: Archae - 125; Bacteria - 6023; Metazoa - 522; Fungi - 292; Plants - 213; Viruses - 0; Other Eukaryotes - 2718 (source: NCBI BLink). & (gnl|cdd|35446 : 560.0) no description available & (gnl|cdd|84944 : 383.0) no description available & (reliability: 1324.0) & (original description: Putative pda1, Description = Pyruvate dehydrogenase E1 component subunit alpha, PFAM = PF00676)' T '8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'niben101scf01617_2572-16411' '(at5g50850 : 577.0) MACCI-BOU (MAB1); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, catalytic activity; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 17839 Blast hits to 17830 proteins in 2804 species: Archae - 215; Bacteria - 11375; Metazoa - 619; Fungi - 227; Plants - 405; Viruses - 0; Other Eukaryotes - 4998 (source: NCBI BLink). & (p52904|odpb_pea : 571.0) Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) - Pisum sativum (Garden pea) & (gnl|cdd|35744 : 553.0) no description available & (gnl|cdd|84022 : 534.0) no description available & (reliability: 1154.0) & (original description: Putative acoB, Description = Pyruvate dehydrogenase E1 component subunit beta, mitochondrial, PFAM = PF02779;PF02780)' T '8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'niben101scf03106_161646-175427' '(p52903|odpa_soltu : 725.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Solanum tuberosum (Potato) & (at1g59900 : 652.0) encodes the e1 alpha subunit of the pyruvate dehydrogenase complex (PDC); pyruvate dehydrogenase complex E1 alpha subunit (E1 ALPHA); FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, pyruvate dehydrogenase (acetyl-transferring) activity; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: cytosol, mitochondrion, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017), Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y (InterPro:IPR017597); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT1G24180.1); Has 9893 Blast hits to 9890 proteins in 1845 species: Archae - 125; Bacteria - 6023; Metazoa - 522; Fungi - 292; Plants - 213; Viruses - 0; Other Eukaryotes - 2718 (source: NCBI BLink). & (gnl|cdd|35446 : 563.0) no description available & (gnl|cdd|84944 : 388.0) no description available & (reliability: 1304.0) & (original description: Putative pda1, Description = Pyruvate dehydrogenase E1 component subunit alpha, PFAM = PF00676)' T '8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'niben101scf03886_218015-232989' '(at5g50850 : 572.0) MACCI-BOU (MAB1); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, catalytic activity; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 17839 Blast hits to 17830 proteins in 2804 species: Archae - 215; Bacteria - 11375; Metazoa - 619; Fungi - 227; Plants - 405; Viruses - 0; Other Eukaryotes - 4998 (source: NCBI BLink). & (p52904|odpb_pea : 570.0) Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) - Pisum sativum (Garden pea) & (gnl|cdd|35744 : 536.0) no description available & (gnl|cdd|84022 : 518.0) no description available & (reliability: 1144.0) & (original description: Putative acoB, Description = Pyruvate dehydrogenase E1 component subunit beta, mitochondrial, PFAM = PF02780;PF02780;PF02779)' T '8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'niben101scf06914_108188-117412' '(at5g50850 : 592.0) MACCI-BOU (MAB1); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, catalytic activity; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 17839 Blast hits to 17830 proteins in 2804 species: Archae - 215; Bacteria - 11375; Metazoa - 619; Fungi - 227; Plants - 405; Viruses - 0; Other Eukaryotes - 4998 (source: NCBI BLink). & (p52904|odpb_pea : 586.0) Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) - Pisum sativum (Garden pea) & (gnl|cdd|35744 : 558.0) no description available & (gnl|cdd|84022 : 534.0) no description available & (reliability: 1184.0) & (original description: Putative PDH2, Description = Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial, PFAM = PF02780;PF02779)' T '8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'niben101scf06933_227316-232709' '(at1g01090 : 656.0) pyruvate dehydrogenase E1 alpha subunit; pyruvate dehydrogenase E1 alpha (PDH-E1 ALPHA); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity; INVOLVED IN: oxidation reduction, glycolysis, metabolic process; LOCATED IN: chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017), Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y (InterPro:IPR017597); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase complex E1 alpha subunit (TAIR:AT1G59900.1); Has 10065 Blast hits to 10059 proteins in 1888 species: Archae - 130; Bacteria - 6136; Metazoa - 517; Fungi - 241; Plants - 224; Viruses - 0; Other Eukaryotes - 2817 (source: NCBI BLink). & (gnl|cdd|35446 : 466.0) no description available & (gnl|cdd|48163 : 400.0) no description available & (p52903|odpa_soltu : 239.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Solanum tuberosum (Potato) & (reliability: 1312.0) & (original description: Putative acoA, Description = Pyruvate dehydrogenase E1 component subunit alpha, PFAM = PF00676)' T '8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'niben101scf10148_10983-15848' '(at1g01090 : 666.0) pyruvate dehydrogenase E1 alpha subunit; pyruvate dehydrogenase E1 alpha (PDH-E1 ALPHA); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity; INVOLVED IN: oxidation reduction, glycolysis, metabolic process; LOCATED IN: chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017), Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y (InterPro:IPR017597); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase complex E1 alpha subunit (TAIR:AT1G59900.1); Has 10065 Blast hits to 10059 proteins in 1888 species: Archae - 130; Bacteria - 6136; Metazoa - 517; Fungi - 241; Plants - 224; Viruses - 0; Other Eukaryotes - 2817 (source: NCBI BLink). & (gnl|cdd|35446 : 461.0) no description available & (gnl|cdd|31269 : 398.0) no description available & (p52903|odpa_soltu : 246.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Solanum tuberosum (Potato) & (reliability: 1332.0) & (original description: Putative pdhA, Description = Pyruvate dehydrogenase E1 component subunit alpha, PFAM = PF00676)' T '8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'niben101scf10390_43569-56591' '(at1g30120 : 629.0) Encodes a putative plastid pyruvate dehydrogenase E1 beta subunit that is distinct from the mitochondrial pyruvate dehydrogenase E1 beta subunit.; pyruvate dehydrogenase E1 beta (PDH-E1 BETA); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: plastid pyruvate dehydrogenase complex, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: Transketolase family protein (TAIR:AT2G34590.1); Has 14229 Blast hits to 14219 proteins in 2378 species: Archae - 200; Bacteria - 8952; Metazoa - 481; Fungi - 222; Plants - 270; Viruses - 0; Other Eukaryotes - 4104 (source: NCBI BLink). & (gnl|cdd|79356 : 595.0) no description available & (gnl|cdd|35744 : 518.0) no description available & (q9mur4|odpb_mesvi : 419.0) Pyruvate dehydrogenase E1 component subunit beta (EC 1.2.4.1) - Mesostigma viride & (reliability: 1258.0) & (original description: Putative acoB, Description = Pyruvate dehydrogenase E1 component subunit beta, PFAM = PF02780;PF02779)' T '8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'niben101scf14210_124631-132800' '(at2g34590 : 648.0) Transketolase family protein; FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, zinc ion binding, transketolase activity; INVOLVED IN: pollen tube development; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 14271 Blast hits to 14261 proteins in 2406 species: Archae - 196; Bacteria - 9106; Metazoa - 476; Fungi - 223; Plants - 259; Viruses - 0; Other Eukaryotes - 4011 (source: NCBI BLink). & (gnl|cdd|79356 : 593.0) no description available & (gnl|cdd|35744 : 515.0) no description available & (q9mur4|odpb_mesvi : 421.0) Pyruvate dehydrogenase E1 component subunit beta (EC 1.2.4.1) - Mesostigma viride & (reliability: 1270.0) & (original description: Putative pdhB, Description = Pyruvate dehydrogenase E1 component beta subunit, PFAM = PF02779;PF02780)' T '8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'niben101scf17044_145409-151645' '(at5g50850 : 580.0) MACCI-BOU (MAB1); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, catalytic activity; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 17839 Blast hits to 17830 proteins in 2804 species: Archae - 215; Bacteria - 11375; Metazoa - 619; Fungi - 227; Plants - 405; Viruses - 0; Other Eukaryotes - 4998 (source: NCBI BLink). & (p52904|odpb_pea : 573.0) Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) - Pisum sativum (Garden pea) & (gnl|cdd|35744 : 543.0) no description available & (gnl|cdd|84022 : 531.0) no description available & (reliability: 1160.0) & (original description: Putative acoB, Description = Pyruvate dehydrogenase E1 component subunit beta, mitochondrial, PFAM = PF02780;PF02779)' T '8.1.1.2' 'TCA / org transformation.TCA.pyruvate DH.E2' 'nbv0.3scaffold4679_48954-67005' '(at3g52200 : 676.0) dihydrolipoamide S-acetyltransferase (LTA3) mRNA, nuclear; LTA3; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2). & (gnl|cdd|35777 : 417.0) no description available & (gnl|cdd|84002 : 334.0) no description available & (reliability: 1352.0) & (original description: Putative ACEF, Description = Acetyltransferase component of pyruvate dehydrogenase complex, PFAM = PF02817;PF00364;PF00364;PF00198)' T '8.1.1.2' 'TCA / org transformation.TCA.pyruvate DH.E2' 'nbv0.3scaffold19902_14681-22472' '(at1g34430 : 557.0) embryo defective 3003 (EMB3003); FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, acyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cytosolic ribosome, plasma membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: 2-oxoacid dehydrogenases acyltransferase family protein (TAIR:AT3G25860.1); Has 22237 Blast hits to 19790 proteins in 2346 species: Archae - 125; Bacteria - 13063; Metazoa - 719; Fungi - 466; Plants - 373; Viruses - 0; Other Eukaryotes - 7491 (source: NCBI BLink). & (gnl|cdd|35777 : 401.0) no description available & (gnl|cdd|84002 : 352.0) no description available & (reliability: 1114.0) & (original description: Putative pdhC, Description = E3 binding domain protein, PFAM = PF00198;PF00364;PF02817)' T '8.1.1.2' 'TCA / org transformation.TCA.pyruvate DH.E2' 'nbv0.5scaffold3135_202847-224225' '(at3g52200 : 671.0) dihydrolipoamide S-acetyltransferase (LTA3) mRNA, nuclear; LTA3; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2). & (gnl|cdd|35777 : 419.0) no description available & (gnl|cdd|84002 : 334.0) no description available & (reliability: 1342.0) & (original description: Putative LTA3, Description = Dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial, PFAM = PF00364;PF00364;PF02817;PF00198)' T '8.1.1.2' 'TCA / org transformation.TCA.pyruvate DH.E2' 'niben044scf00014589ctg000_3770-11195' '(at1g34430 : 551.0) embryo defective 3003 (EMB3003); FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, acyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cytosolic ribosome, plasma membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: 2-oxoacid dehydrogenases acyltransferase family protein (TAIR:AT3G25860.1); Has 22237 Blast hits to 19790 proteins in 2346 species: Archae - 125; Bacteria - 13063; Metazoa - 719; Fungi - 466; Plants - 373; Viruses - 0; Other Eukaryotes - 7491 (source: NCBI BLink). & (gnl|cdd|35777 : 403.0) no description available & (gnl|cdd|84002 : 357.0) no description available & (reliability: 1102.0) & (original description: Putative aceF, Description = Branched-chain alpha-keto acid dehydrogenase subunit E2, PFAM = PF00364;PF00198;PF02817)' T '8.1.1.2' 'TCA / org transformation.TCA.pyruvate DH.E2' 'niben044scf00018960ctg003_167-18855' '(at3g52200 : 675.0) dihydrolipoamide S-acetyltransferase (LTA3) mRNA, nuclear; LTA3; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2). & (gnl|cdd|35777 : 416.0) no description available & (gnl|cdd|84002 : 332.0) no description available & (reliability: 1350.0) & (original description: Putative LTA3, Description = Dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial, PFAM = PF00198;PF00364;PF00364;PF02817)' T '8.1.1.2' 'TCA / org transformation.TCA.pyruvate DH.E2' 'niben044scf00047836ctg003_7220-15393' '(at3g13930 : 695.0) Dihydrolipoamide acetyltransferase, long form protein; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, copper ion binding; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2); Has 21425 Blast hits to 19790 proteins in 2331 species: Archae - 106; Bacteria - 12026; Metazoa - 730; Fungi - 474; Plants - 369; Viruses - 0; Other Eukaryotes - 7720 (source: NCBI BLink). & (gnl|cdd|35777 : 501.0) no description available & (gnl|cdd|84002 : 435.0) no description available & (reliability: 1390.0) & (original description: Putative dlaA, Description = Acetyltransferase component of pyruvate dehydrogenase complex, PFAM = PF02817;PF00364;PF00198)' T '8.1.1.2' 'TCA / org transformation.TCA.pyruvate DH.E2' 'niben101scf02413_432443-441614' '(at3g13930 : 685.0) Dihydrolipoamide acetyltransferase, long form protein; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, copper ion binding; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2); Has 21425 Blast hits to 19790 proteins in 2331 species: Archae - 106; Bacteria - 12026; Metazoa - 730; Fungi - 474; Plants - 369; Viruses - 0; Other Eukaryotes - 7720 (source: NCBI BLink). & (gnl|cdd|35777 : 502.0) no description available & (gnl|cdd|84002 : 439.0) no description available & (reliability: 1370.0) & (original description: Putative dlaA, Description = Acetyltransferase component of pyruvate dehydrogenase complex, PFAM = PF00198;PF02817;PF00364)' T '8.1.1.2' 'TCA / org transformation.TCA.pyruvate DH.E2' 'niben101scf03983_172256-181205' '(at3g13930 : 659.0) Dihydrolipoamide acetyltransferase, long form protein; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, copper ion binding; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2); Has 21425 Blast hits to 19790 proteins in 2331 species: Archae - 106; Bacteria - 12026; Metazoa - 730; Fungi - 474; Plants - 369; Viruses - 0; Other Eukaryotes - 7720 (source: NCBI BLink). & (gnl|cdd|35777 : 497.0) no description available & (gnl|cdd|84002 : 432.0) no description available & (reliability: 1318.0) & (original description: Putative dlaA, Description = Acetyltransferase component of pyruvate dehydrogenase complex, PFAM = PF02817;PF00198;PF00364)' T '8.1.1.2' 'TCA / org transformation.TCA.pyruvate DH.E2' 'niben101scf05697_151247-183160' '(at3g52200 : 523.0) dihydrolipoamide S-acetyltransferase (LTA3) mRNA, nuclear; LTA3; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2). & (gnl|cdd|35777 : 425.0) no description available & (gnl|cdd|84002 : 343.0) no description available & (reliability: 1046.0) & (original description: Putative pdhC, Description = Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, PFAM = PF00364;PF02817;PF00198)' T '8.1.1.2' 'TCA / org transformation.TCA.pyruvate DH.E2' 'niben101scf09170_85535-93354' '(at3g13930 : 682.0) Dihydrolipoamide acetyltransferase, long form protein; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, copper ion binding; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2); Has 21425 Blast hits to 19790 proteins in 2331 species: Archae - 106; Bacteria - 12026; Metazoa - 730; Fungi - 474; Plants - 369; Viruses - 0; Other Eukaryotes - 7720 (source: NCBI BLink). & (gnl|cdd|35777 : 498.0) no description available & (gnl|cdd|84002 : 436.0) no description available & (reliability: 1364.0) & (original description: Putative DLAT, Description = Acetyltransferase component of pyruvate dehydrogenase complex, PFAM = PF02817;PF00198;PF00364)' T '8.1.1.2' 'TCA / org transformation.TCA.pyruvate DH.E2' 'niben101scf15653_283303-291079' '(at1g34430 : 558.0) embryo defective 3003 (EMB3003); FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, acyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cytosolic ribosome, plasma membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: 2-oxoacid dehydrogenases acyltransferase family protein (TAIR:AT3G25860.1); Has 22237 Blast hits to 19790 proteins in 2346 species: Archae - 125; Bacteria - 13063; Metazoa - 719; Fungi - 466; Plants - 373; Viruses - 0; Other Eukaryotes - 7491 (source: NCBI BLink). & (gnl|cdd|35777 : 399.0) no description available & (gnl|cdd|84002 : 356.0) no description available & (reliability: 1116.0) & (original description: Putative aceF, Description = Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component, PFAM = PF00364;PF00198;PF02817)' T '8.1.1.3' 'TCA / org transformation.TCA.pyruvate DH.E3' 'nbv0.5scaffold3496_146957-155074' '(at1g48030 : 808.0) Encodes a mitochondrial lipoamide dehydrogenase whose expression is induced by light.; lipoamide dehydrogenase 1 (LPD1); FUNCTIONS IN: dihydrolipoyl dehydrogenase activity, copper ion binding, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, response to light stimulus; LOCATED IN: mitochondrion, apoplast, mitochondrial respiratory chain complex I, mitochondrial matrix; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 2 (TAIR:AT3G17240.3); Has 41519 Blast hits to 41478 proteins in 3269 species: Archae - 1065; Bacteria - 30177; Metazoa - 918; Fungi - 552; Plants - 652; Viruses - 0; Other Eukaryotes - 8155 (source: NCBI BLink). & (p31023|dldh_pea : 792.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (gnl|cdd|36549 : 731.0) no description available & (gnl|cdd|81930 : 577.0) no description available & (reliability: 1616.0) & (original description: Putative lpd2, Description = Dihydrolipoyl dehydrogenase, PFAM = PF02852;PF07992)' T '8.1.1.3' 'TCA / org transformation.TCA.pyruvate DH.E3' 'niben044scf00055337ctg002_1-8010' '(at4g16155 : 885.0) dihydrolipoyl dehydrogenases; FUNCTIONS IN: dihydrolipoyl dehydrogenase activity; INVOLVED IN: oxidation reduction, cell redox homeostasis; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 1 (TAIR:AT3G16950.1); Has 29334 Blast hits to 29301 proteins in 3032 species: Archae - 559; Bacteria - 20043; Metazoa - 811; Fungi - 377; Plants - 519; Viruses - 0; Other Eukaryotes - 7025 (source: NCBI BLink). & (gnl|cdd|36549 : 561.0) no description available & (gnl|cdd|81943 : 544.0) no description available & (p31023|dldh_pea : 237.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (reliability: 1744.0) & (original description: Putative LPD2, Description = Dihydrolipoyl dehydrogenase 2, chloroplastic, PFAM = PF07992;PF02852)' T '8.1.1.3' 'TCA / org transformation.TCA.pyruvate DH.E3' 'niben101scf00332_548090-558842' '(at4g16155 : 885.0) dihydrolipoyl dehydrogenases; FUNCTIONS IN: dihydrolipoyl dehydrogenase activity; INVOLVED IN: oxidation reduction, cell redox homeostasis; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 1 (TAIR:AT3G16950.1); Has 29334 Blast hits to 29301 proteins in 3032 species: Archae - 559; Bacteria - 20043; Metazoa - 811; Fungi - 377; Plants - 519; Viruses - 0; Other Eukaryotes - 7025 (source: NCBI BLink). & (gnl|cdd|36549 : 566.0) no description available & (gnl|cdd|81943 : 548.0) no description available & (p31023|dldh_pea : 236.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (reliability: 1754.0) & (original description: Putative LPD2, Description = Dihydrolipoyl dehydrogenase 2, chloroplastic, PFAM = PF07992;PF02852)' T '8.1.1.3' 'TCA / org transformation.TCA.pyruvate DH.E3' 'niben101scf00466_488120-497396' '(at3g16950 : 583.0) encodes a plastid lipoamide dehydrogenase, subunit of the pyruvate dehydrogenase complex which provides acetyl-CoA for de novo fatty acid biosynthesis. The gene is highly expressed in developing seeds.; lipoamide dehydrogenase 1 (LPD1); CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: dihydrolipoyl dehydrogenases (TAIR:AT4G16155.1); Has 30222 Blast hits to 30191 proteins in 3051 species: Archae - 599; Bacteria - 20783; Metazoa - 811; Fungi - 386; Plants - 503; Viruses - 0; Other Eukaryotes - 7140 (source: NCBI BLink). & (gnl|cdd|36549 : 370.0) no description available & (gnl|cdd|81943 : 363.0) no description available & (p31023|dldh_pea : 143.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (reliability: 1166.0) & (original description: Putative dld2, Description = Dihydrolipoyl dehydrogenase, PFAM = PF07992)' T '8.1.1.3' 'TCA / org transformation.TCA.pyruvate DH.E3' 'niben101scf01236_587457-595991' '(at1g48030 : 804.0) Encodes a mitochondrial lipoamide dehydrogenase whose expression is induced by light.; lipoamide dehydrogenase 1 (LPD1); FUNCTIONS IN: dihydrolipoyl dehydrogenase activity, copper ion binding, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, response to light stimulus; LOCATED IN: mitochondrion, apoplast, mitochondrial respiratory chain complex I, mitochondrial matrix; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 2 (TAIR:AT3G17240.3); Has 41519 Blast hits to 41478 proteins in 3269 species: Archae - 1065; Bacteria - 30177; Metazoa - 918; Fungi - 552; Plants - 652; Viruses - 0; Other Eukaryotes - 8155 (source: NCBI BLink). & (p31023|dldh_pea : 789.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (gnl|cdd|36549 : 728.0) no description available & (gnl|cdd|81930 : 575.0) no description available & (reliability: 1608.0) & (original description: Putative lpd2, Description = Dihydrolipoyl dehydrogenase, PFAM = PF07992;PF02852)' T '8.1.1.3' 'TCA / org transformation.TCA.pyruvate DH.E3' 'niben101scf01334_677076-683143' '(at1g48030 : 795.0) Encodes a mitochondrial lipoamide dehydrogenase whose expression is induced by light.; lipoamide dehydrogenase 1 (LPD1); FUNCTIONS IN: dihydrolipoyl dehydrogenase activity, copper ion binding, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, response to light stimulus; LOCATED IN: mitochondrion, apoplast, mitochondrial respiratory chain complex I, mitochondrial matrix; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 2 (TAIR:AT3G17240.3); Has 41519 Blast hits to 41478 proteins in 3269 species: Archae - 1065; Bacteria - 30177; Metazoa - 918; Fungi - 552; Plants - 652; Viruses - 0; Other Eukaryotes - 8155 (source: NCBI BLink). & (p31023|dldh_pea : 788.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (gnl|cdd|36549 : 728.0) no description available & (gnl|cdd|81930 : 575.0) no description available & (reliability: 1590.0) & (original description: Putative lpd2, Description = Dihydrolipoyl dehydrogenase, PFAM = PF07992;PF02852)' T '8.1.1.3' 'TCA / org transformation.TCA.pyruvate DH.E3' 'niben101scf01671_189578-196804' '(at1g48030 : 799.0) Encodes a mitochondrial lipoamide dehydrogenase whose expression is induced by light.; lipoamide dehydrogenase 1 (LPD1); FUNCTIONS IN: dihydrolipoyl dehydrogenase activity, copper ion binding, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, response to light stimulus; LOCATED IN: mitochondrion, apoplast, mitochondrial respiratory chain complex I, mitochondrial matrix; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 2 (TAIR:AT3G17240.3); Has 41519 Blast hits to 41478 proteins in 3269 species: Archae - 1065; Bacteria - 30177; Metazoa - 918; Fungi - 552; Plants - 652; Viruses - 0; Other Eukaryotes - 8155 (source: NCBI BLink). & (p31023|dldh_pea : 788.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (gnl|cdd|36549 : 727.0) no description available & (gnl|cdd|81930 : 576.0) no description available & (reliability: 1598.0) & (original description: Putative lpd2, Description = Dihydrolipoyl dehydrogenase, PFAM = PF07992;PF02852)' T '8.1.1.3' 'TCA / org transformation.TCA.pyruvate DH.E3' 'niben101scf04473_319942-329009' '(at4g16155 : 862.0) dihydrolipoyl dehydrogenases; FUNCTIONS IN: dihydrolipoyl dehydrogenase activity; INVOLVED IN: oxidation reduction, cell redox homeostasis; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 1 (TAIR:AT3G16950.1); Has 29334 Blast hits to 29301 proteins in 3032 species: Archae - 559; Bacteria - 20043; Metazoa - 811; Fungi - 377; Plants - 519; Viruses - 0; Other Eukaryotes - 7025 (source: NCBI BLink). & (gnl|cdd|36549 : 551.0) no description available & (gnl|cdd|81943 : 537.0) no description available & (p31023|dldh_pea : 237.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (reliability: 1708.0) & (original description: Putative lpdA, Description = Dihydrolipoyl dehydrogenase, PFAM = PF07992;PF02852)' T '8.1.1.3' 'TCA / org transformation.TCA.pyruvate DH.E3' 'niben101scf07691_2396-11872' '(at4g16155 : 840.0) dihydrolipoyl dehydrogenases; FUNCTIONS IN: dihydrolipoyl dehydrogenase activity; INVOLVED IN: oxidation reduction, cell redox homeostasis; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 1 (TAIR:AT3G16950.1); Has 29334 Blast hits to 29301 proteins in 3032 species: Archae - 559; Bacteria - 20043; Metazoa - 811; Fungi - 377; Plants - 519; Viruses - 0; Other Eukaryotes - 7025 (source: NCBI BLink). & (gnl|cdd|36549 : 558.0) no description available & (gnl|cdd|81943 : 541.0) no description available & (p31023|dldh_pea : 234.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (reliability: 1678.0) & (original description: Putative lpd2, Description = Lipoamide dehydrogenase, PFAM = PF07992;PF02852)' T '8.1.2' 'TCA / org transformation.TCA.CS' 'niben044scf00017491ctg010_1695-11596' '(o80433|cisy_dauca : 807.0) Citrate synthase, mitochondrial precursor (EC 2.3.3.1) - Daucus carota (Carrot) & (at2g44350 : 785.0) encodes a mitochrondrion targeted citrate synthase, the first enzyme of the tricarboxylic acid cycle, catalyzing the condensation of acetyl-CoA and oxaloacetate, finally yielding citrate and CoA.; ATCS; FUNCTIONS IN: citrate (SI)-synthase activity, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, tricarboxylic acid cycle; LOCATED IN: mitochondrion, cell wall, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Citrate synthase-like, large alpha subdomain (InterPro:IPR016142), Citrate synthase, eukaryotic (InterPro:IPR010109), Citrate synthase active site (InterPro:IPR019810), Citrate synthase-like, core (InterPro:IPR016141), Citrate synthase-like (InterPro:IPR002020); BEST Arabidopsis thaliana protein match is: citrate synthase 5 (TAIR:AT3G60100.1); Has 10608 Blast hits to 10602 proteins in 2793 species: Archae - 158; Bacteria - 6984; Metazoa - 258; Fungi - 321; Plants - 178; Viruses - 0; Other Eukaryotes - 2709 (source: NCBI BLink). & (gnl|cdd|37828 : 596.0) no description available & (gnl|cdd|77261 : 496.0) no description available & (reliability: 1570.0) & (original description: Putative CS, Description = Citrate synthase, mitochondrial, PFAM = PF00285)' T '8.1.2' 'TCA / org transformation.TCA.CS' 'niben101scf00557_237553-247328' '(o80433|cisy_dauca : 805.0) Citrate synthase, mitochondrial precursor (EC 2.3.3.1) - Daucus carota (Carrot) & (at2g44350 : 785.0) encodes a mitochrondrion targeted citrate synthase, the first enzyme of the tricarboxylic acid cycle, catalyzing the condensation of acetyl-CoA and oxaloacetate, finally yielding citrate and CoA.; ATCS; FUNCTIONS IN: citrate (SI)-synthase activity, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, tricarboxylic acid cycle; LOCATED IN: mitochondrion, cell wall, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Citrate synthase-like, large alpha subdomain (InterPro:IPR016142), Citrate synthase, eukaryotic (InterPro:IPR010109), Citrate synthase active site (InterPro:IPR019810), Citrate synthase-like, core (InterPro:IPR016141), Citrate synthase-like (InterPro:IPR002020); BEST Arabidopsis thaliana protein match is: citrate synthase 5 (TAIR:AT3G60100.1); Has 10608 Blast hits to 10602 proteins in 2793 species: Archae - 158; Bacteria - 6984; Metazoa - 258; Fungi - 321; Plants - 178; Viruses - 0; Other Eukaryotes - 2709 (source: NCBI BLink). & (gnl|cdd|37828 : 598.0) no description available & (gnl|cdd|77261 : 497.0) no description available & (reliability: 1570.0) & (original description: Putative CS, Description = Citrate synthase, mitochondrial, PFAM = PF00285)' T '8.1.3' 'TCA / org transformation.TCA.aconitase' 'nbv0.3scaffold1930_48989-61059' '(p49608|acoc_cucma : 1700.0) Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) - Cucurbita maxima (Pumpkin) (Winter squash) & (at2g05710 : 1680.0) Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5' UTR of CSD2 in vitro. ACO3 is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; aconitase 3 (ACO3); FUNCTIONS IN: aconitate hydratase activity, copper ion binding, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha (InterPro:IPR001030), Aconitase family, 4Fe-4S cluster binding site (InterPro:IPR018136), Aconitase A/isopropylmalate dehydratase small subunit, swivel (InterPro:IPR000573), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 (InterPro:IPR015932), Aconitase/Iron regulatory protein 2/2-methylisocitrate dehydratase (InterPro:IPR015934), Aconitase-like core (InterPro:IPR015937), Aconitase/3-isopropylmalate dehydratase, swivel (InterPro:IPR015928), Aconitase/iron regulatory protein 2 (InterPro:IPR006249), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (InterPro:IPR015931); BEST Arabidopsis thaliana protein match is: aconitase 1 (TAIR:AT4G35830.1); Has 20552 Blast hits to 20369 proteins in 2575 species: Archae - 558; Bacteria - 10777; Metazoa - 503; Fungi - 660; Plants - 232; Viruses - 0; Other Eukaryotes - 7822 (source: NCBI BLink). & (gnl|cdd|35673 : 1630.0) no description available & (gnl|cdd|82907 : 1421.0) no description available & (reliability: 3360.0) & (original description: Putative acnA, Description = Aconitase, PFAM = PF00694;PF00330)' T '8.1.3' 'TCA / org transformation.TCA.aconitase' 'nbv0.3scaffold11889_7591-24167' '(p49608|acoc_cucma : 1680.0) Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) - Cucurbita maxima (Pumpkin) (Winter squash) & (at2g05710 : 1660.0) Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5' UTR of CSD2 in vitro. ACO3 is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; aconitase 3 (ACO3); FUNCTIONS IN: aconitate hydratase activity, copper ion binding, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha (InterPro:IPR001030), Aconitase family, 4Fe-4S cluster binding site (InterPro:IPR018136), Aconitase A/isopropylmalate dehydratase small subunit, swivel (InterPro:IPR000573), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 (InterPro:IPR015932), Aconitase/Iron regulatory protein 2/2-methylisocitrate dehydratase (InterPro:IPR015934), Aconitase-like core (InterPro:IPR015937), Aconitase/3-isopropylmalate dehydratase, swivel (InterPro:IPR015928), Aconitase/iron regulatory protein 2 (InterPro:IPR006249), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (InterPro:IPR015931); BEST Arabidopsis thaliana protein match is: aconitase 1 (TAIR:AT4G35830.1); Has 20552 Blast hits to 20369 proteins in 2575 species: Archae - 558; Bacteria - 10777; Metazoa - 503; Fungi - 660; Plants - 232; Viruses - 0; Other Eukaryotes - 7822 (source: NCBI BLink). & (gnl|cdd|35673 : 1605.0) no description available & (gnl|cdd|82907 : 1394.0) no description available & (reliability: 3320.0) & (original description: Putative acnA, Description = Aconitase, PFAM = PF00330;PF00694)' T '8.1.3' 'TCA / org transformation.TCA.aconitase' 'nbv0.5scaffold5163_37025-51059' '(p49608|acoc_cucma : 1701.0) Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) - Cucurbita maxima (Pumpkin) (Winter squash) & (at2g05710 : 1675.0) Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5' UTR of CSD2 in vitro. ACO3 is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; aconitase 3 (ACO3); FUNCTIONS IN: aconitate hydratase activity, copper ion binding, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha (InterPro:IPR001030), Aconitase family, 4Fe-4S cluster binding site (InterPro:IPR018136), Aconitase A/isopropylmalate dehydratase small subunit, swivel (InterPro:IPR000573), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 (InterPro:IPR015932), Aconitase/Iron regulatory protein 2/2-methylisocitrate dehydratase (InterPro:IPR015934), Aconitase-like core (InterPro:IPR015937), Aconitase/3-isopropylmalate dehydratase, swivel (InterPro:IPR015928), Aconitase/iron regulatory protein 2 (InterPro:IPR006249), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (InterPro:IPR015931); BEST Arabidopsis thaliana protein match is: aconitase 1 (TAIR:AT4G35830.1); Has 20552 Blast hits to 20369 proteins in 2575 species: Archae - 558; Bacteria - 10777; Metazoa - 503; Fungi - 660; Plants - 232; Viruses - 0; Other Eukaryotes - 7822 (source: NCBI BLink). & (gnl|cdd|35673 : 1625.0) no description available & (gnl|cdd|82907 : 1421.0) no description available & (reliability: 3350.0) & (original description: Putative aco1, Description = Probable cytoplasmic aconitate hydratase, PFAM = PF00330;PF00694)' T '8.1.3' 'TCA / org transformation.TCA.aconitase' 'niben101scf00859_97684-109270' '(p49608|acoc_cucma : 1698.0) Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) - Cucurbita maxima (Pumpkin) (Winter squash) & (at2g05710 : 1679.0) Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5' UTR of CSD2 in vitro. ACO3 is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; aconitase 3 (ACO3); FUNCTIONS IN: aconitate hydratase activity, copper ion binding, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha (InterPro:IPR001030), Aconitase family, 4Fe-4S cluster binding site (InterPro:IPR018136), Aconitase A/isopropylmalate dehydratase small subunit, swivel (InterPro:IPR000573), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 (InterPro:IPR015932), Aconitase/Iron regulatory protein 2/2-methylisocitrate dehydratase (InterPro:IPR015934), Aconitase-like core (InterPro:IPR015937), Aconitase/3-isopropylmalate dehydratase, swivel (InterPro:IPR015928), Aconitase/iron regulatory protein 2 (InterPro:IPR006249), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (InterPro:IPR015931); BEST Arabidopsis thaliana protein match is: aconitase 1 (TAIR:AT4G35830.1); Has 20552 Blast hits to 20369 proteins in 2575 species: Archae - 558; Bacteria - 10777; Metazoa - 503; Fungi - 660; Plants - 232; Viruses - 0; Other Eukaryotes - 7822 (source: NCBI BLink). & (gnl|cdd|35673 : 1628.0) no description available & (gnl|cdd|82907 : 1419.0) no description available & (reliability: 3358.0) & (original description: Putative acnA, Description = Aconitase, PFAM = PF00330;PF00694)' T '8.1.3' 'TCA / org transformation.TCA.aconitase' 'niben101scf01269_898736-908438' '(at2g05710 : 1612.0) Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5' UTR of CSD2 in vitro. ACO3 is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; aconitase 3 (ACO3); FUNCTIONS IN: aconitate hydratase activity, copper ion binding, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha (InterPro:IPR001030), Aconitase family, 4Fe-4S cluster binding site (InterPro:IPR018136), Aconitase A/isopropylmalate dehydratase small subunit, swivel (InterPro:IPR000573), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 (InterPro:IPR015932), Aconitase/Iron regulatory protein 2/2-methylisocitrate dehydratase (InterPro:IPR015934), Aconitase-like core (InterPro:IPR015937), Aconitase/3-isopropylmalate dehydratase, swivel (InterPro:IPR015928), Aconitase/iron regulatory protein 2 (InterPro:IPR006249), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (InterPro:IPR015931); BEST Arabidopsis thaliana protein match is: aconitase 1 (TAIR:AT4G35830.1); Has 20552 Blast hits to 20369 proteins in 2575 species: Archae - 558; Bacteria - 10777; Metazoa - 503; Fungi - 660; Plants - 232; Viruses - 0; Other Eukaryotes - 7822 (source: NCBI BLink). & (q6yzx6|acoc_orysa : 1598.0) Putative aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) - Oryza sativa (Rice) & (gnl|cdd|35673 : 1585.0) no description available & (gnl|cdd|82907 : 1409.0) no description available & (reliability: 3224.0) & (original description: Putative acnA, Description = Aconitate hydratase, PFAM = PF00330;PF00694)' T '8.1.3' 'TCA / org transformation.TCA.aconitase' 'niben101scf02894_54600-71400' '(p49608|acoc_cucma : 1708.0) Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) - Cucurbita maxima (Pumpkin) (Winter squash) & (at2g05710 : 1686.0) Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5' UTR of CSD2 in vitro. ACO3 is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; aconitase 3 (ACO3); FUNCTIONS IN: aconitate hydratase activity, copper ion binding, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha (InterPro:IPR001030), Aconitase family, 4Fe-4S cluster binding site (InterPro:IPR018136), Aconitase A/isopropylmalate dehydratase small subunit, swivel (InterPro:IPR000573), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 (InterPro:IPR015932), Aconitase/Iron regulatory protein 2/2-methylisocitrate dehydratase (InterPro:IPR015934), Aconitase-like core (InterPro:IPR015937), Aconitase/3-isopropylmalate dehydratase, swivel (InterPro:IPR015928), Aconitase/iron regulatory protein 2 (InterPro:IPR006249), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (InterPro:IPR015931); BEST Arabidopsis thaliana protein match is: aconitase 1 (TAIR:AT4G35830.1); Has 20552 Blast hits to 20369 proteins in 2575 species: Archae - 558; Bacteria - 10777; Metazoa - 503; Fungi - 660; Plants - 232; Viruses - 0; Other Eukaryotes - 7822 (source: NCBI BLink). & (gnl|cdd|35673 : 1632.0) no description available & (gnl|cdd|82907 : 1424.0) no description available & (reliability: 3372.0) & (original description: Putative ACO1, Description = Aconitate hydratase 1, PFAM = PF00330;PF00694)' T '8.1.4' 'TCA / org transformation.TCA.IDH' 'niben101scf00440_50107-57529' '(p50218|idhc_tobac : 805.0) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36739 : 772.0) no description available & (at1g65930 : 754.0) Encodes a NADP+-isocitrate dehydrogenase that is believed to function in the cytosol. It appears to contribute to NADPH production under oxidative stress, and thereby to participate in redox signalling linked to defense responses.; cytosolic NADP+-dependent isocitrate dehydrogenase (cICDH); FUNCTIONS IN: isocitrate dehydrogenase (NADP+) activity, copper ion binding; INVOLVED IN: in 7 processes; LOCATED IN: cytosol, apoplast, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NADP-dependent, eukaryotic (InterPro:IPR004790), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase (TAIR:AT1G54340.1); Has 5437 Blast hits to 5413 proteins in 1130 species: Archae - 48; Bacteria - 1243; Metazoa - 817; Fungi - 231; Plants - 475; Viruses - 0; Other Eukaryotes - 2623 (source: NCBI BLink). & (gnl|cdd|82596 : 702.0) no description available & (reliability: 1508.0) & (original description: Putative icd, Description = Isocitrate dehydrogenase [NADP], PFAM = PF00180)' T '8.1.4' 'TCA / org transformation.TCA.IDH' 'niben101scf00983_264546-270757' '(p50218|idhc_tobac : 853.0) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36739 : 764.0) no description available & (at1g65930 : 757.0) Encodes a NADP+-isocitrate dehydrogenase that is believed to function in the cytosol. It appears to contribute to NADPH production under oxidative stress, and thereby to participate in redox signalling linked to defense responses.; cytosolic NADP+-dependent isocitrate dehydrogenase (cICDH); FUNCTIONS IN: isocitrate dehydrogenase (NADP+) activity, copper ion binding; INVOLVED IN: in 7 processes; LOCATED IN: cytosol, apoplast, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NADP-dependent, eukaryotic (InterPro:IPR004790), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase (TAIR:AT1G54340.1); Has 5437 Blast hits to 5413 proteins in 1130 species: Archae - 48; Bacteria - 1243; Metazoa - 817; Fungi - 231; Plants - 475; Viruses - 0; Other Eukaryotes - 2623 (source: NCBI BLink). & (gnl|cdd|82596 : 700.0) no description available & (reliability: 1514.0) & (original description: Putative icd, Description = Isocitrate dehydrogenase [NADP], PFAM = PF00180)' T '8.1.4' 'TCA / org transformation.TCA.IDH' 'niben101scf05216_472524-478502' '(p50218|idhc_tobac : 853.0) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36739 : 766.0) no description available & (at1g65930 : 758.0) Encodes a NADP+-isocitrate dehydrogenase that is believed to function in the cytosol. It appears to contribute to NADPH production under oxidative stress, and thereby to participate in redox signalling linked to defense responses.; cytosolic NADP+-dependent isocitrate dehydrogenase (cICDH); FUNCTIONS IN: isocitrate dehydrogenase (NADP+) activity, copper ion binding; INVOLVED IN: in 7 processes; LOCATED IN: cytosol, apoplast, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NADP-dependent, eukaryotic (InterPro:IPR004790), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase (TAIR:AT1G54340.1); Has 5437 Blast hits to 5413 proteins in 1130 species: Archae - 48; Bacteria - 1243; Metazoa - 817; Fungi - 231; Plants - 475; Viruses - 0; Other Eukaryotes - 2623 (source: NCBI BLink). & (gnl|cdd|82596 : 701.0) no description available & (reliability: 1516.0) & (original description: Putative icd, Description = Isocitrate dehydrogenase [NADP], PFAM = PF00180)' T '8.1.4' 'TCA / org transformation.TCA.IDH' 'niben101scf06263_263216-274111' '(at4g35260 : 523.0) Encodes a regulatory subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase.; isocitrate dehydrogenase 1 (IDH1); CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NAD-dependent, mitochondrial (InterPro:IPR004434); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase subunit 2 (TAIR:AT2G17130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36003 : 522.0) no description available & (gnl|cdd|30821 : 348.0) no description available & (p29696|leu3_soltu : 292.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Solanum tuberosum (Potato) & (reliability: 1046.0) & (original description: Putative IDH1, Description = Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial, PFAM = PF00180)' T '8.1.4' 'TCA / org transformation.TCA.IDH' 'niben101scf10132_111907-124880' '(gnl|cdd|36739 : 748.0) no description available & (at5g14590 : 741.0) Isocitrate/isopropylmalate dehydrogenase family protein; FUNCTIONS IN: NAD or NADH binding, isocitrate dehydrogenase (NADP+) activity, magnesium ion binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; INVOLVED IN: oxidation reduction, isocitrate metabolic process, metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NADP-dependent, eukaryotic (InterPro:IPR004790), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: cytosolic NADP+-dependent isocitrate dehydrogenase (TAIR:AT1G65930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82596 : 707.0) no description available & (q40345|idhp_medsa : 674.0) Isocitrate dehydrogenase [NADP], chloroplast precursor (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (Fragment) - Medicago sativa (Alfalfa) & (reliability: 1482.0) & (original description: Putative icd, Description = Isocitrate dehydrogenase [NADP], PFAM = PF00180)' T '8.1.4' 'TCA / org transformation.TCA.IDH' 'niben101scf17542_14040-22094' '(at4g35260 : 585.0) Encodes a regulatory subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase.; isocitrate dehydrogenase 1 (IDH1); CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NAD-dependent, mitochondrial (InterPro:IPR004434); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase subunit 2 (TAIR:AT2G17130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36003 : 548.0) no description available & (gnl|cdd|30821 : 347.0) no description available & (p29696|leu3_soltu : 277.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Solanum tuberosum (Potato) & (reliability: 1170.0) & (original description: Putative IDH1, Description = Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial, PFAM = PF00180)' T '8.1.5' 'TCA / org transformation.TCA.2-oxoglutarate dehydrogenase' 'nbv0.3scaffold18992_13803-22359' '(at5g55070 : 481.0) Dihydrolipoamide succinyltransferase; FUNCTIONS IN: zinc ion binding, acyltransferase activity; INVOLVED IN: response to oxidative stress, metabolic process; LOCATED IN: cytosolic ribosome, mitochondrion; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide succinyltransferase (InterPro:IPR006255), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide succinyltransferase (TAIR:AT4G26910.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35779 : 457.0) no description available & (gnl|cdd|81709 : 437.0) no description available & (reliability: 962.0) & (original description: Putative dlst, Description = 2-oxoglutarate dehydrogenase complex component E2, PFAM = PF00198;PF00364)' T '8.1.5' 'TCA / org transformation.TCA.2-oxoglutarate dehydrogenase' 'nbv0.3scaffold45244_7937-15830' '(at3g55410 : 1485.0) 2-oxoglutarate dehydrogenase, E1 component; FUNCTIONS IN: oxoglutarate dehydrogenase (succinyl-transferring) activity, cobalt ion binding, zinc ion binding; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxoglutarate dehydrogenase, E1 component (InterPro:IPR011603), Dehydrogenase, E1 component (InterPro:IPR001017), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate dehydrogenase, E1 component (TAIR:AT5G65750.1); Has 10999 Blast hits to 10962 proteins in 1954 species: Archae - 31; Bacteria - 4409; Metazoa - 546; Fungi - 299; Plants - 167; Viruses - 0; Other Eukaryotes - 5547 (source: NCBI BLink). & (gnl|cdd|35671 : 1358.0) no description available & (gnl|cdd|82973 : 1125.0) no description available & (reliability: 2970.0) & (original description: Putative sucA, Description = 2-oxoglutarate dehydrogenase E1 component, PFAM = PF16870;PF02779;PF00676;PF16078)' T '8.1.5' 'TCA / org transformation.TCA.2-oxoglutarate dehydrogenase' 'nbv0.5scaffold3542_227908-235013' '(at5g55070 : 122.0) Dihydrolipoamide succinyltransferase; FUNCTIONS IN: zinc ion binding, acyltransferase activity; INVOLVED IN: response to oxidative stress, metabolic process; LOCATED IN: cytosolic ribosome, mitochondrion; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide succinyltransferase (InterPro:IPR006255), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide succinyltransferase (TAIR:AT4G26910.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35779 : 87.8) no description available & (reliability: 244.0) & (original description: Putative sucB, Description = Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, PFAM = PF00364)' T '8.1.5' 'TCA / org transformation.TCA.2-oxoglutarate dehydrogenase' 'niben044scf00014187ctg007_13148-20093' '(gnl|cdd|35779 : 528.0) no description available & (at5g55070 : 515.0) Dihydrolipoamide succinyltransferase; FUNCTIONS IN: zinc ion binding, acyltransferase activity; INVOLVED IN: response to oxidative stress, metabolic process; LOCATED IN: cytosolic ribosome, mitochondrion; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide succinyltransferase (InterPro:IPR006255), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide succinyltransferase (TAIR:AT4G26910.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81709 : 498.0) no description available & (reliability: 1030.0) & (original description: Putative dlst, Description = Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, PFAM = PF00198;PF00364)' T '8.1.5' 'TCA / org transformation.TCA.2-oxoglutarate dehydrogenase' 'niben044scf00032958ctg005_2352-10678' '(at3g55410 : 1907.0) 2-oxoglutarate dehydrogenase, E1 component; FUNCTIONS IN: oxoglutarate dehydrogenase (succinyl-transferring) activity, cobalt ion binding, zinc ion binding; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxoglutarate dehydrogenase, E1 component (InterPro:IPR011603), Dehydrogenase, E1 component (InterPro:IPR001017), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate dehydrogenase, E1 component (TAIR:AT5G65750.1); Has 10999 Blast hits to 10962 proteins in 1954 species: Archae - 31; Bacteria - 4409; Metazoa - 546; Fungi - 299; Plants - 167; Viruses - 0; Other Eukaryotes - 5547 (source: NCBI BLink). & (gnl|cdd|35671 : 1590.0) no description available & (gnl|cdd|82973 : 1231.0) no description available & (reliability: 3814.0) & (original description: Putative ogd1, Description = E1 subunit of 2-oxoglutarate dehydrogenase, PFAM = PF16870;PF02779;PF00676;PF16078)' T '8.1.5' 'TCA / org transformation.TCA.2-oxoglutarate dehydrogenase' 'niben101scf00311_309205-320696' '(gnl|cdd|35779 : 518.0) no description available & (at5g55070 : 492.0) Dihydrolipoamide succinyltransferase; FUNCTIONS IN: zinc ion binding, acyltransferase activity; INVOLVED IN: response to oxidative stress, metabolic process; LOCATED IN: cytosolic ribosome, mitochondrion; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide succinyltransferase (InterPro:IPR006255), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide succinyltransferase (TAIR:AT4G26910.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81709 : 490.0) no description available & (reliability: 984.0) & (original description: Putative ogd2, Description = 2-oxoglutarate dehydrogenase, E2 component, PFAM = PF00364;PF00198)' T '8.1.5' 'TCA / org transformation.TCA.2-oxoglutarate dehydrogenase' 'niben101scf00435_488462-497034' '(at5g55070 : 590.0) Dihydrolipoamide succinyltransferase; FUNCTIONS IN: zinc ion binding, acyltransferase activity; INVOLVED IN: response to oxidative stress, metabolic process; LOCATED IN: cytosolic ribosome, mitochondrion; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide succinyltransferase (InterPro:IPR006255), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide succinyltransferase (TAIR:AT4G26910.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35779 : 541.0) no description available & (gnl|cdd|81709 : 485.0) no description available & (reliability: 1180.0) & (original description: Putative dlst, Description = 2-oxoglutarate dehydrogenase complex component E2, PFAM = PF00364;PF00198)' T '8.1.5' 'TCA / org transformation.TCA.2-oxoglutarate dehydrogenase' 'niben101scf00449_464566-473177' '(at3g55410 : 1892.0) 2-oxoglutarate dehydrogenase, E1 component; FUNCTIONS IN: oxoglutarate dehydrogenase (succinyl-transferring) activity, cobalt ion binding, zinc ion binding; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxoglutarate dehydrogenase, E1 component (InterPro:IPR011603), Dehydrogenase, E1 component (InterPro:IPR001017), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate dehydrogenase, E1 component (TAIR:AT5G65750.1); Has 10999 Blast hits to 10962 proteins in 1954 species: Archae - 31; Bacteria - 4409; Metazoa - 546; Fungi - 299; Plants - 167; Viruses - 0; Other Eukaryotes - 5547 (source: NCBI BLink). & (gnl|cdd|35671 : 1578.0) no description available & (gnl|cdd|82973 : 1223.0) no description available & (reliability: 3784.0) & (original description: Putative ogd1, Description = E1 subunit of 2-oxoglutarate dehydrogenase, PFAM = PF16870;PF00676;PF02779;PF16078)' T '8.1.5' 'TCA / org transformation.TCA.2-oxoglutarate dehydrogenase' 'niben101scf04477_344645-353201' '(at5g55070 : 535.0) Dihydrolipoamide succinyltransferase; FUNCTIONS IN: zinc ion binding, acyltransferase activity; INVOLVED IN: response to oxidative stress, metabolic process; LOCATED IN: cytosolic ribosome, mitochondrion; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide succinyltransferase (InterPro:IPR006255), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide succinyltransferase (TAIR:AT4G26910.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35779 : 493.0) no description available & (gnl|cdd|81709 : 463.0) no description available & (reliability: 1070.0) & (original description: Putative dlst, Description = Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, PFAM = PF00364;PF00198)' T '8.1.5' 'TCA / org transformation.TCA.2-oxoglutarate dehydrogenase' 'niben101scf07650_148658-156877' '(at3g55410 : 1889.0) 2-oxoglutarate dehydrogenase, E1 component; FUNCTIONS IN: oxoglutarate dehydrogenase (succinyl-transferring) activity, cobalt ion binding, zinc ion binding; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxoglutarate dehydrogenase, E1 component (InterPro:IPR011603), Dehydrogenase, E1 component (InterPro:IPR001017), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate dehydrogenase, E1 component (TAIR:AT5G65750.1); Has 10999 Blast hits to 10962 proteins in 1954 species: Archae - 31; Bacteria - 4409; Metazoa - 546; Fungi - 299; Plants - 167; Viruses - 0; Other Eukaryotes - 5547 (source: NCBI BLink). & (gnl|cdd|35671 : 1580.0) no description available & (gnl|cdd|82973 : 1222.0) no description available & (reliability: 3778.0) & (original description: Putative sucA, Description = Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component, PFAM = PF00676;PF16870;PF02779;PF16078)' T '8.1.5' 'TCA / org transformation.TCA.2-oxoglutarate dehydrogenase' 'niben101scf10015_225757-235380' '(at3g55410 : 1906.0) 2-oxoglutarate dehydrogenase, E1 component; FUNCTIONS IN: oxoglutarate dehydrogenase (succinyl-transferring) activity, cobalt ion binding, zinc ion binding; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxoglutarate dehydrogenase, E1 component (InterPro:IPR011603), Dehydrogenase, E1 component (InterPro:IPR001017), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate dehydrogenase, E1 component (TAIR:AT5G65750.1); Has 10999 Blast hits to 10962 proteins in 1954 species: Archae - 31; Bacteria - 4409; Metazoa - 546; Fungi - 299; Plants - 167; Viruses - 0; Other Eukaryotes - 5547 (source: NCBI BLink). & (gnl|cdd|35671 : 1587.0) no description available & (gnl|cdd|82973 : 1236.0) no description available & (reliability: 3812.0) & (original description: Putative ogd1, Description = E1 subunit of 2-oxoglutarate dehydrogenase, PFAM = PF02779;PF16870;PF00676;PF16078)' T '8.1.6' 'TCA / org transformation.TCA.succinyl-CoA ligase' 'nbv0.5scaffold4295_20719-30955' '(at2g20420 : 669.0) ATP citrate lyase (ACL) family protein; FUNCTIONS IN: succinate-CoA ligase (GDP-forming) activity, copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit (InterPro:IPR005809), Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4); Has 9337 Blast hits to 9333 proteins in 2108 species: Archae - 181; Bacteria - 4147; Metazoa - 466; Fungi - 228; Plants - 81; Viruses - 0; Other Eukaryotes - 4234 (source: NCBI BLink). & (q6k9n6|sucb_orysa : 659.0) Succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, beta chain) (SCS-beta) - Oryza sativa (Rice) & (gnl|cdd|38010 : 513.0) no description available & (gnl|cdd|80721 : 461.0) no description available & (reliability: 1338.0) & (original description: Putative scsB, Description = Succinyl-CoA ligase subunit beta, PFAM = PF00549;PF08442)' T '8.1.6' 'TCA / org transformation.TCA.succinyl-CoA ligase' 'niben044scf00020686ctg017_2224-14471' '(gnl|cdd|36469 : 500.0) no description available & (at5g23250 : 487.0) Succinyl-CoA ligase, alpha subunit; FUNCTIONS IN: succinate-CoA ligase (GDP-forming) activity, copper ion binding; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), CoA-binding (InterPro:IPR003781), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: Succinyl-CoA ligase, alpha subunit (TAIR:AT5G08300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6zl94|suca_orysa : 482.0) Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase subunit alpha) (SCS-alpha) - Oryza sativa (Rice) & (gnl|cdd|81688 : 466.0) no description available & (reliability: 974.0) & (original description: Putative SCOA, Description = Succinyl-CoA ligase [ADP-forming] subunit alpha-1, mitochondrial, PFAM = PF02629;PF00549)' T '8.1.6' 'TCA / org transformation.TCA.succinyl-CoA ligase' 'niben101scf00944_775882-789591' '(at2g20420 : 689.0) ATP citrate lyase (ACL) family protein; FUNCTIONS IN: succinate-CoA ligase (GDP-forming) activity, copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit (InterPro:IPR005809), Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4); Has 9337 Blast hits to 9333 proteins in 2108 species: Archae - 181; Bacteria - 4147; Metazoa - 466; Fungi - 228; Plants - 81; Viruses - 0; Other Eukaryotes - 4234 (source: NCBI BLink). & (q6k9n6|sucb_orysa : 686.0) Succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, beta chain) (SCS-beta) - Oryza sativa (Rice) & (gnl|cdd|38010 : 523.0) no description available & (gnl|cdd|80721 : 461.0) no description available & (reliability: 1378.0) & (original description: Putative scsB, Description = Succinyl-CoA ligase subunit beta, PFAM = PF08442;PF00549)' T '8.1.6' 'TCA / org transformation.TCA.succinyl-CoA ligase' 'niben101scf01230_455269-467357' '(gnl|cdd|36469 : 508.0) no description available & (at5g23250 : 498.0) Succinyl-CoA ligase, alpha subunit; FUNCTIONS IN: succinate-CoA ligase (GDP-forming) activity, copper ion binding; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), CoA-binding (InterPro:IPR003781), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: Succinyl-CoA ligase, alpha subunit (TAIR:AT5G08300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6zl94|suca_orysa : 484.0) Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase subunit alpha) (SCS-alpha) - Oryza sativa (Rice) & (gnl|cdd|81688 : 474.0) no description available & (reliability: 996.0) & (original description: Putative SCOA, Description = Succinyl-CoA ligase [ADP-forming] subunit alpha-1, mitochondrial, PFAM = PF00549;PF02629)' T '8.1.6' 'TCA / org transformation.TCA.succinyl-CoA ligase' 'niben101scf03595_977186-998863' '(gnl|cdd|36469 : 500.0) no description available & (at5g23250 : 484.0) Succinyl-CoA ligase, alpha subunit; FUNCTIONS IN: succinate-CoA ligase (GDP-forming) activity, copper ion binding; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), CoA-binding (InterPro:IPR003781), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: Succinyl-CoA ligase, alpha subunit (TAIR:AT5G08300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6zl94|suca_orysa : 476.0) Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase subunit alpha) (SCS-alpha) - Oryza sativa (Rice) & (gnl|cdd|81688 : 468.0) no description available & (reliability: 968.0) & (original description: Putative scsA, Description = Succinyl-CoA ligase [ADP-forming] subunit alpha, PFAM = PF00549;PF02629)' T '8.1.6' 'TCA / org transformation.TCA.succinyl-CoA ligase' 'niben101scf07722_114342-137687' '(gnl|cdd|36469 : 501.0) no description available & (at5g23250 : 486.0) Succinyl-CoA ligase, alpha subunit; FUNCTIONS IN: succinate-CoA ligase (GDP-forming) activity, copper ion binding; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), CoA-binding (InterPro:IPR003781), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: Succinyl-CoA ligase, alpha subunit (TAIR:AT5G08300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6zl94|suca_orysa : 476.0) Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase subunit alpha) (SCS-alpha) - Oryza sativa (Rice) & (gnl|cdd|81688 : 470.0) no description available & (reliability: 972.0) & (original description: Putative SCOA, Description = Succinyl-CoA ligase [ADP-forming] subunit alpha-1, mitochondrial, PFAM = PF00549;PF02629)' T '8.1.6' 'TCA / org transformation.TCA.succinyl-CoA ligase' 'niben101scf13185_82520-102422' '(at2g20420 : 620.0) ATP citrate lyase (ACL) family protein; FUNCTIONS IN: succinate-CoA ligase (GDP-forming) activity, copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit (InterPro:IPR005809), Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4); Has 9337 Blast hits to 9333 proteins in 2108 species: Archae - 181; Bacteria - 4147; Metazoa - 466; Fungi - 228; Plants - 81; Viruses - 0; Other Eukaryotes - 4234 (source: NCBI BLink). & (q6k9n6|sucb_orysa : 608.0) Succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, beta chain) (SCS-beta) - Oryza sativa (Rice) & (gnl|cdd|38010 : 488.0) no description available & (gnl|cdd|80721 : 444.0) no description available & (reliability: 1240.0) & (original description: Putative scsB, Description = Succinyl-CoA ligase subunit beta, PFAM = PF08442;PF00549)' T '8.1.6' 'TCA / org transformation.TCA.succinyl-CoA ligase' 'niben101scf22702_12357-19373' '(at2g20420 : 701.0) ATP citrate lyase (ACL) family protein; FUNCTIONS IN: succinate-CoA ligase (GDP-forming) activity, copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit (InterPro:IPR005809), Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4); Has 9337 Blast hits to 9333 proteins in 2108 species: Archae - 181; Bacteria - 4147; Metazoa - 466; Fungi - 228; Plants - 81; Viruses - 0; Other Eukaryotes - 4234 (source: NCBI BLink). & (q6k9n6|sucb_orysa : 698.0) Succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, beta chain) (SCS-beta) - Oryza sativa (Rice) & (gnl|cdd|38010 : 529.0) no description available & (gnl|cdd|80721 : 465.0) no description available & (reliability: 1402.0) & (original description: Putative scsB, Description = Succinyl-CoA ligase subunit beta, PFAM = PF08442;PF00549)' T '8.1.7' 'TCA / org transformation.TCA.succinate dehydrogenase' 'nbv0.3scaffold13816_36051-40652' '(at5g40650 : 448.0) One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Expressed during germination and post-germinative growth.; succinate dehydrogenase 2-2 (SDH2-2); CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Fumarate reductase, C-terminal (InterPro:IPR012285), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), Alpha-helical ferredoxin (InterPro:IPR009051), Succinate dehydrogenase/fumarate reductase iron-sulphur protein (InterPro:IPR004489); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 2-1 (TAIR:AT3G27380.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38259 : 419.0) no description available & (gnl|cdd|81798 : 372.0) no description available & (reliability: 896.0) & (original description: Putative sdh2, Description = Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, PFAM = PF13085;PF13534)' T '8.1.7' 'TCA / org transformation.TCA.succinate dehydrogenase' 'niben044scf00011859ctg010_1-1362' '(at5g09600 : 86.7) Encodes one of the membrane anchor subunits of the mitochondrial respiratory complex II. The protein is encoded by the nuclear genome but is imported into the mitochondrion. There are two genes that encode this protein, the other is SDH3-2.; succinate dehydrogenase 3-1 (SDH3-1); CONTAINS InterPro DOMAIN/s: Succinate dehydrogenase/Fumarate reductase, transmembrane subunit (InterPro:IPR000701); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 3-2 (TAIR:AT4G32210.1). & (reliability: 173.4) & (original description: Putative sdh3, Description = Succinate dehydrogenase subunit 3, PFAM = PF01127)' T '8.1.7' 'TCA / org transformation.TCA.succinate dehydrogenase' 'niben101scf00752_70654-72956' '(at5g09600 : 87.0) Encodes one of the membrane anchor subunits of the mitochondrial respiratory complex II. The protein is encoded by the nuclear genome but is imported into the mitochondrion. There are two genes that encode this protein, the other is SDH3-2.; succinate dehydrogenase 3-1 (SDH3-1); CONTAINS InterPro DOMAIN/s: Succinate dehydrogenase/Fumarate reductase, transmembrane subunit (InterPro:IPR000701); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 3-2 (TAIR:AT4G32210.1). & (reliability: 174.0) & (original description: Putative sdh3, Description = Succinate dehydrogenase subunit 3, PFAM = PF01127)' T '8.1.7' 'TCA / org transformation.TCA.succinate dehydrogenase' 'niben101scf03693_145301-154774' '(at5g66760 : 1149.0) One of two genes in Arabidopsis that encode a flavoprotein subunit of the mitochondrial succinate dehydrogenase complex.; succinate dehydrogenase 1-1 (SDH1-1); FUNCTIONS IN: cobalt ion binding, succinate dehydrogenase activity, ATP binding; INVOLVED IN: mitochondrial electron transport, succinate to ubiquinone; LOCATED IN: mitochondrial respiratory chain complex II, mitochondrion, cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Succinate dehydrogenase, flavoprotein subunit (InterPro:IPR011281), Fumarate reductase/succinate dehydrogenase, FAD-binding site (InterPro:IPR003952), Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (InterPro:IPR015939), Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953), Succinate dehydrogenase/fumarate reductase, flavoprotein subunit (InterPro:IPR014006), Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal (InterPro:IPR004112); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 1-2 (TAIR:AT2G18450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6zdy8|dhsa_orysa : 1136.0) Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial precursor (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) - Oryza sativa (Rice) & (gnl|cdd|82801 : 1092.0) no description available & (gnl|cdd|37614 : 1002.0) no description available & (reliability: 2298.0) & (original description: Putative sdh1, Description = Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, PFAM = PF02910;PF00890)' T '8.1.7' 'TCA / org transformation.TCA.succinate dehydrogenase' 'niben101scf06569_210917-215653' '(at5g65165 : 425.0) One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Transcripts appear during seed maturation, persist through dessication, are abundant in dry seeds, and markedly decline during germination.; succinate dehydrogenase 2-3 (SDH2-3); CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Fumarate reductase, C-terminal (InterPro:IPR012285), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), Alpha-helical ferredoxin (InterPro:IPR009051), Succinate dehydrogenase/fumarate reductase iron-sulphur protein (InterPro:IPR004489); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 2-2 (TAIR:AT5G40650.1); Has 8948 Blast hits to 8944 proteins in 2136 species: Archae - 163; Bacteria - 5307; Metazoa - 268; Fungi - 171; Plants - 148; Viruses - 0; Other Eukaryotes - 2891 (source: NCBI BLink). & (gnl|cdd|38259 : 358.0) no description available & (gnl|cdd|81798 : 346.0) no description available & (reliability: 850.0) & (original description: Putative sdh, Description = Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, PFAM = PF13085;PF13534)' T '8.1.7' 'TCA / org transformation.TCA.succinate dehydrogenase' 'niben101scf07576_160039-166155' '(at5g40650 : 444.0) One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Expressed during germination and post-germinative growth.; succinate dehydrogenase 2-2 (SDH2-2); CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Fumarate reductase, C-terminal (InterPro:IPR012285), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), Alpha-helical ferredoxin (InterPro:IPR009051), Succinate dehydrogenase/fumarate reductase iron-sulphur protein (InterPro:IPR004489); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 2-1 (TAIR:AT3G27380.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38259 : 419.0) no description available & (gnl|cdd|81798 : 369.0) no description available & (reliability: 888.0) & (original description: Putative SdhB, Description = Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, PFAM = PF13085;PF13534)' T '8.1.7' 'TCA / org transformation.TCA.succinate dehydrogenase' 'niben101scf14338_253665-263837' '(at5g66760 : 1132.0) One of two genes in Arabidopsis that encode a flavoprotein subunit of the mitochondrial succinate dehydrogenase complex.; succinate dehydrogenase 1-1 (SDH1-1); FUNCTIONS IN: cobalt ion binding, succinate dehydrogenase activity, ATP binding; INVOLVED IN: mitochondrial electron transport, succinate to ubiquinone; LOCATED IN: mitochondrial respiratory chain complex II, mitochondrion, cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Succinate dehydrogenase, flavoprotein subunit (InterPro:IPR011281), Fumarate reductase/succinate dehydrogenase, FAD-binding site (InterPro:IPR003952), Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (InterPro:IPR015939), Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953), Succinate dehydrogenase/fumarate reductase, flavoprotein subunit (InterPro:IPR014006), Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal (InterPro:IPR004112); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 1-2 (TAIR:AT2G18450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6zdy8|dhsa_orysa : 1124.0) Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial precursor (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) - Oryza sativa (Rice) & (gnl|cdd|82801 : 1082.0) no description available & (gnl|cdd|37614 : 990.0) no description available & (reliability: 2264.0) & (original description: Putative sdh1, Description = Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, PFAM = PF02910;PF00890)' T '8.1.8' 'TCA / org transformation.TCA.fumarase' 'niben044scf00014535ctg006_27091-30485' '(gnl|cdd|36531 : 831.0) no description available & (at5g50950 : 825.0) Encodes a fumarase enzyme initially shown to be in the mitochondria through proteomic studies but later shown to be present in the cytosol using an RFP fluorescent protein tag. It appears to be important for the accumulation of fumarate from malate in leaves in the light, and helps to promote nitrogen assimilation under high nitrogen conditions. It does not appear to be necessary for lipid metabolism and seedling growth.; FUMARASE 2 (FUM2); FUNCTIONS IN: fumarate hydratase activity, protein binding; INVOLVED IN: nitrate assimilation, response to salt stress, fumarate metabolic process; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: male gametophyte, guard cell, root, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Fumarate hydratase, class II (InterPro:IPR005677), L-Aspartase-like (InterPro:IPR008948), Fumarate lyase, conserved site (InterPro:IPR020557), Lyase 1, N-terminal (InterPro:IPR022761), Fumarase C, C-terminal (InterPro:IPR018951), Fumarate lyase (InterPro:IPR000362); BEST Arabidopsis thaliana protein match is: fumarase 1 (TAIR:AT2G47510.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80687 : 790.0) no description available & (reliability: 1650.0) & (original description: Putative FUM2, Description = Fumarate hydratase 2, chloroplastic, PFAM = PF00206;PF10415)' T '8.1.8' 'TCA / org transformation.TCA.fumarase' 'niben101scf00872_20151-30810' '(at2g47510 : 838.0) Encodes a mitochondrial-localized protein. The FUM1 gene appears to be essential, suggesting that FUM1 may play a crucial role as a fumarase in the tricarboxylic acid cycle.; fumarase 1 (FUM1); FUNCTIONS IN: fumarate hydratase activity, protein binding; INVOLVED IN: response to oxidative stress, response to salt stress, pollen tube development; LOCATED IN: mitochondrion; EXPRESSED IN: cotyledon, male gametophyte, guard cell, root; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Fumarate hydratase, class II (InterPro:IPR005677), L-Aspartase-like (InterPro:IPR008948), Fumarate lyase, conserved site (InterPro:IPR020557), Lyase 1, N-terminal (InterPro:IPR022761), Fumarase C, C-terminal (InterPro:IPR018951), Fumarate lyase (InterPro:IPR000362); BEST Arabidopsis thaliana protein match is: FUMARASE 2 (TAIR:AT5G50950.2); Has 19736 Blast hits to 19727 proteins in 2822 species: Archae - 389; Bacteria - 12991; Metazoa - 306; Fungi - 295; Plants - 106; Viruses - 0; Other Eukaryotes - 5649 (source: NCBI BLink). & (gnl|cdd|36531 : 837.0) no description available & (gnl|cdd|80687 : 796.0) no description available & (reliability: 1676.0) & (original description: Putative FUM1, Description = Fumarate hydratase 1, mitochondrial, PFAM = PF00206;PF10415)' T '8.1.9' 'TCA / org transformation.TCA.malate DH' 'niben044scf00015957ctg006_2773-10105' '(at1g53240 : 530.0) Lactate/malate dehydrogenase family protein; FUNCTIONS IN: malate dehydrogenase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to salt stress, response to cold, defense response to bacterium, peptidyl-cysteine S-nitrosylation; LOCATED IN: mitochondrion, cell wall, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT3G15020.1); Has 17502 Blast hits to 17499 proteins in 5422 species: Archae - 240; Bacteria - 12205; Metazoa - 1281; Fungi - 536; Plants - 649; Viruses - 0; Other Eukaryotes - 2591 (source: NCBI BLink). & (p83373|mdhm_fraan : 529.0) Malate dehydrogenase, mitochondrial precursor (EC 1.1.1.37) - Fragaria ananassa (Strawberry) & (gnl|cdd|36707 : 506.0) no description available & (gnl|cdd|58492 : 471.0) no description available & (reliability: 1060.0) & (original description: Putative mMDH, Description = Malate dehydrogenase, PFAM = PF00056;PF02866)' T '8.1.9' 'TCA / org transformation.TCA.malate DH' 'niben101scf00398_286392-292134' '(at1g53240 : 537.0) Lactate/malate dehydrogenase family protein; FUNCTIONS IN: malate dehydrogenase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to salt stress, response to cold, defense response to bacterium, peptidyl-cysteine S-nitrosylation; LOCATED IN: mitochondrion, cell wall, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT3G15020.1); Has 17502 Blast hits to 17499 proteins in 5422 species: Archae - 240; Bacteria - 12205; Metazoa - 1281; Fungi - 536; Plants - 649; Viruses - 0; Other Eukaryotes - 2591 (source: NCBI BLink). & (p83373|mdhm_fraan : 530.0) Malate dehydrogenase, mitochondrial precursor (EC 1.1.1.37) - Fragaria ananassa (Strawberry) & (gnl|cdd|36707 : 509.0) no description available & (gnl|cdd|58492 : 476.0) no description available & (reliability: 1074.0) & (original description: Putative mMDH, Description = Malate dehydrogenase, PFAM = PF00056;PF02866)' T '8.1.9' 'TCA / org transformation.TCA.malate DH' 'niben101scf08142_36898-43517' '(at3g15020 : 545.0) Lactate/malate dehydrogenase family protein; FUNCTIONS IN: malate dehydrogenase activity, copper ion binding; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, apoplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT1G53240.1); Has 16805 Blast hits to 16803 proteins in 5273 species: Archae - 237; Bacteria - 11900; Metazoa - 1175; Fungi - 513; Plants - 469; Viruses - 0; Other Eukaryotes - 2511 (source: NCBI BLink). & (p83373|mdhm_fraan : 539.0) Malate dehydrogenase, mitochondrial precursor (EC 1.1.1.37) - Fragaria ananassa (Strawberry) & (gnl|cdd|36707 : 509.0) no description available & (gnl|cdd|58492 : 475.0) no description available & (reliability: 1090.0) & (original description: Putative mMDH, Description = Malate dehydrogenase, PFAM = PF00056;PF02866)' T '8.1.99' 'TCA / org transformation.TCA.misc' '' '' '8.1.1001' 'TCA / org transformation.TCA' 'citrate' 'gluconeogenese/ glyoxylate cycle; TCA / org transformation' M '8.1.1002' 'TCA / org transformation.TCA' 'aconitate' 'gluconeogenese/ glyoxylate cycle; TCA / org transformation' M '8.1.1003' 'TCA / org transformation.TCA' 'isocitrate' 'gluconeogenese/ glyoxylate cycle; TCA / org transformation' M '8.1.1004' 'TCA / org transformation.TCA' '2-oxoglutarate' 'gluconeogenese/ glyoxylate cycle; TCA / org transformation; N-metabolism.ammonia metabolism; amino acid metabolism' M '8.1.1005' 'TCA / org transformation.TCA' 'succinate' 'amino acid synthesis.lysine; secondary metabolism; gluconeogenese/ glyoxylate cycle; TCA / org transformation' M '8.1.1006' 'TCA / org transformation.TCA' 'fumarate' 'amino acid synthesis.arginine; amino acid degradation.tyrosine; amino acid synthesis.asparagines; amino acid synthesis.aspartate; nucleotide metabolism.synthesis; gluconeogenese/ glyoxylate cycle; TCA / org transformation' M '8.1.1007' 'TCA / org transformation.TCA' 'malate' 'gluconeogenese/ glyoxylate cycle; TCA / org transformation' M '8.1.1008' 'TCA / org transformation.TCA' 'oxaloacetate' 'TCA cycle' M '8.2' 'TCA / org transformation.other organic acid transformations' '' '' '8.2.3' 'TCA / org transformation.other organic acid transformatons.aconitase' '' '' '8.2.4' 'TCA / org transformation.other organic acid transformatons.IDH' 'niben101scf01789_231873-242068' '(p29696|leu3_soltu : 663.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Solanum tuberosum (Potato) & (at5g03290 : 608.0) Encodes a catalytic subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase.; isocitrate dehydrogenase V (IDH-V); FUNCTIONS IN: isocitrate dehydrogenase (NAD+) activity, zinc ion binding, ATP binding; INVOLVED IN: isocitrate metabolic process, tricarboxylic acid cycle, metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NAD-dependent, mitochondrial (InterPro:IPR004434), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase VI (TAIR:AT3G09810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36004 : 571.0) no description available & (gnl|cdd|30821 : 408.0) no description available & (reliability: 1216.0) & (original description: Putative glu2, Description = Isocitrate dehydrogenase [NAD] subunit, mitochondrial, PFAM = PF00180)' T '8.2.4' 'TCA / org transformation.other organic acid transformatons.IDH' 'niben101scf06263_263216-274111' '(at4g35260 : 523.0) Encodes a regulatory subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase.; isocitrate dehydrogenase 1 (IDH1); CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NAD-dependent, mitochondrial (InterPro:IPR004434); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase subunit 2 (TAIR:AT2G17130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36003 : 522.0) no description available & (gnl|cdd|30821 : 348.0) no description available & (p29696|leu3_soltu : 292.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Solanum tuberosum (Potato) & (reliability: 1024.0) & (original description: Putative IDH1, Description = Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial, PFAM = PF00180)' T '8.2.4' 'TCA / org transformation.other organic acid transformatons.IDH' 'niben101scf17542_14040-22094' '(at4g35260 : 585.0) Encodes a regulatory subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase.; isocitrate dehydrogenase 1 (IDH1); CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NAD-dependent, mitochondrial (InterPro:IPR004434); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase subunit 2 (TAIR:AT2G17130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36003 : 548.0) no description available & (gnl|cdd|30821 : 347.0) no description available & (p29696|leu3_soltu : 277.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Solanum tuberosum (Potato) & (reliability: 1134.0) & (original description: Putative IDH1, Description = Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial, PFAM = PF00180)' T '8.2.9' 'TCA / org transformation.other organic acid transformatons.cyt MDH' 'nbv0.5scaffold4559_148919-157802' '(o48902|mdhp_medsa : 715.0) Malate dehydrogenase [NADP], chloroplast precursor (EC 1.1.1.82) (NADP-MDH) - Medicago sativa (Alfalfa) & (at5g58330 : 678.0) lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NADP-dependent, plants (InterPro:IPR011273), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT5G56720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58493 : 654.0) no description available & (gnl|cdd|36709 : 441.0) no description available & (reliability: 1356.0) & (original description: Putative mdh, Description = Malate dehydrogenase, PFAM = PF00056;PF02866)' T '8.2.9' 'TCA / org transformation.other organic acid transformatons.cyt MDH' 'niben044scf00022324ctg001_1-5813' '(o48902|mdhp_medsa : 764.0) Malate dehydrogenase [NADP], chloroplast precursor (EC 1.1.1.82) (NADP-MDH) - Medicago sativa (Alfalfa) & (at5g58330 : 699.0) lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NADP-dependent, plants (InterPro:IPR011273), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT5G56720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58493 : 657.0) no description available & (gnl|cdd|36709 : 437.0) no description available & (reliability: 1398.0) & (original description: Putative mdh, Description = Malate dehydrogenase, PFAM = PF02866;PF00056)' T '8.2.9' 'TCA / org transformation.other organic acid transformatons.cyt MDH' 'niben044scf00030192ctg001_7581-10988' '(at3g47520 : 540.0) Encodes a protein with NAD-dependent malate dehydrogenase activity, located in chloroplasts.; malate dehydrogenase (MDH); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cold; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: peroxisomal NAD-malate dehydrogenase 1 (TAIR:AT2G22780.1); Has 17295 Blast hits to 17293 proteins in 5537 species: Archae - 237; Bacteria - 12026; Metazoa - 1437; Fungi - 394; Plants - 805; Viruses - 0; Other Eukaryotes - 2396 (source: NCBI BLink). & (gnl|cdd|36707 : 488.0) no description available & (gnl|cdd|58492 : 466.0) no description available & (p37228|mdhg_soybn : 394.0) Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) - Glycine max (Soybean) & (reliability: 1080.0) & (original description: Putative gmdh, Description = Malate dehydrogenase, PFAM = PF02866;PF00056)' T '8.2.9' 'TCA / org transformation.other organic acid transformatons.cyt MDH' 'niben044scf00057295ctg000_1713-8044' '(o48902|mdhp_medsa : 760.0) Malate dehydrogenase [NADP], chloroplast precursor (EC 1.1.1.82) (NADP-MDH) - Medicago sativa (Alfalfa) & (at5g58330 : 702.0) lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NADP-dependent, plants (InterPro:IPR011273), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT5G56720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58493 : 658.0) no description available & (gnl|cdd|36709 : 437.0) no description available & (reliability: 1404.0) & (original description: Putative mdh, Description = Malate dehydrogenase, PFAM = PF00056;PF02866)' T '8.2.9' 'TCA / org transformation.other organic acid transformatons.cyt MDH' 'niben101scf00063_1302569-1313658' '(at3g47520 : 550.0) Encodes a protein with NAD-dependent malate dehydrogenase activity, located in chloroplasts.; malate dehydrogenase (MDH); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cold; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: peroxisomal NAD-malate dehydrogenase 1 (TAIR:AT2G22780.1); Has 17295 Blast hits to 17293 proteins in 5537 species: Archae - 237; Bacteria - 12026; Metazoa - 1437; Fungi - 394; Plants - 805; Viruses - 0; Other Eukaryotes - 2396 (source: NCBI BLink). & (gnl|cdd|36707 : 495.0) no description available & (gnl|cdd|58492 : 473.0) no description available & (p37228|mdhg_soybn : 397.0) Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) - Glycine max (Soybean) & (reliability: 1100.0) & (original description: Putative gmdh, Description = Malate dehydrogenase, PFAM = PF02866;PF00056)' T '8.2.9' 'TCA / org transformation.other organic acid transformatons.cyt MDH' 'niben101scf00878_396446-401335' '(q08062|mdhc_maize : 567.0) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) - Zea mays (Maize) & (at5g43330 : 547.0) Lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD-dependent, cytosolic (InterPro:IPR011274), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT1G04410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58491 : 540.0) no description available & (gnl|cdd|36709 : 531.0) no description available & (reliability: 1094.0) & (original description: Putative cMDH, Description = Malate dehydrogenase, PFAM = PF02866;PF00056)' T '8.2.9' 'TCA / org transformation.other organic acid transformatons.cyt MDH' 'niben101scf01922_1037928-1041154' '(at3g47520 : 513.0) Encodes a protein with NAD-dependent malate dehydrogenase activity, located in chloroplasts.; malate dehydrogenase (MDH); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cold; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: peroxisomal NAD-malate dehydrogenase 1 (TAIR:AT2G22780.1); Has 17295 Blast hits to 17293 proteins in 5537 species: Archae - 237; Bacteria - 12026; Metazoa - 1437; Fungi - 394; Plants - 805; Viruses - 0; Other Eukaryotes - 2396 (source: NCBI BLink). & (gnl|cdd|36707 : 470.0) no description available & (gnl|cdd|58492 : 443.0) no description available & (p37228|mdhg_soybn : 385.0) Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) - Glycine max (Soybean) & (reliability: 1026.0) & (original description: Putative gmdh, Description = Malate dehydrogenase, PFAM = PF00056;PF02866)' T '8.2.9' 'TCA / org transformation.other organic acid transformatons.cyt MDH' 'niben101scf02819_768488-777398' '(o48902|mdhp_medsa : 690.0) Malate dehydrogenase [NADP], chloroplast precursor (EC 1.1.1.82) (NADP-MDH) - Medicago sativa (Alfalfa) & (at5g58330 : 670.0) lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NADP-dependent, plants (InterPro:IPR011273), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT5G56720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58493 : 650.0) no description available & (gnl|cdd|36709 : 438.0) no description available & (reliability: 1340.0) & (original description: Putative mdh, Description = Malate dehydrogenase, PFAM = PF02866;PF00056)' T '8.2.9' 'TCA / org transformation.other organic acid transformatons.cyt MDH' 'niben101scf03450_31475-38249' '(o48905|mdhc_medsa : 600.0) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) - Medicago sativa (Alfalfa) & (at1g04410 : 593.0) Lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cadmium ion, response to zinc ion, response to salt stress; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD-dependent, cytosolic (InterPro:IPR011274), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT5G43330.1); Has 11998 Blast hits to 11997 proteins in 3022 species: Archae - 169; Bacteria - 7171; Metazoa - 1456; Fungi - 287; Plants - 683; Viruses - 0; Other Eukaryotes - 2232 (source: NCBI BLink). & (gnl|cdd|36709 : 547.0) no description available & (gnl|cdd|58491 : 547.0) no description available & (reliability: 1186.0) & (original description: Putative cMDH, Description = Malate dehydrogenase, PFAM = PF02866;PF00056)' T '8.2.9' 'TCA / org transformation.other organic acid transformatons.cyt MDH' 'niben101scf04462_102975-109075' '(q08062|mdhc_maize : 566.0) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) - Zea mays (Maize) & (at5g43330 : 548.0) Lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD-dependent, cytosolic (InterPro:IPR011274), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT1G04410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58491 : 542.0) no description available & (gnl|cdd|36709 : 533.0) no description available & (reliability: 1096.0) & (original description: Putative cMDH, Description = Malate dehydrogenase, PFAM = PF00056;PF02866)' T '8.2.9' 'TCA / org transformation.other organic acid transformatons.cyt MDH' 'niben101scf06245_143911-150119' '(o48902|mdhp_medsa : 691.0) Malate dehydrogenase [NADP], chloroplast precursor (EC 1.1.1.82) (NADP-MDH) - Medicago sativa (Alfalfa) & (at5g58330 : 637.0) lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NADP-dependent, plants (InterPro:IPR011273), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT5G56720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58493 : 627.0) no description available & (gnl|cdd|36709 : 409.0) no description available & (reliability: 1274.0) & (original description: Putative mdh, Description = Malate dehydrogenase, PFAM = PF00056;PF02866)' T '8.2.9' 'TCA / org transformation.other organic acid transformatons.cyt MDH' 'niben101scf11646_240656-243891' '(at3g47520 : 526.0) Encodes a protein with NAD-dependent malate dehydrogenase activity, located in chloroplasts.; malate dehydrogenase (MDH); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cold; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: peroxisomal NAD-malate dehydrogenase 1 (TAIR:AT2G22780.1); Has 17295 Blast hits to 17293 proteins in 5537 species: Archae - 237; Bacteria - 12026; Metazoa - 1437; Fungi - 394; Plants - 805; Viruses - 0; Other Eukaryotes - 2396 (source: NCBI BLink). & (gnl|cdd|36707 : 480.0) no description available & (gnl|cdd|58492 : 448.0) no description available & (p37228|mdhg_soybn : 389.0) Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) - Glycine max (Soybean) & (reliability: 1052.0) & (original description: Putative gmdh, Description = Malate dehydrogenase, PFAM = PF02866;PF00056)' T '8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'nbv0.5scaffold438_499412-538004' '(p37221|maom_soltu : 517.0) NAD-dependent malic enzyme 62 kDa isoform, mitochondrial precursor (EC 1.1.1.39) (NAD-ME) - Solanum tuberosum (Potato) & (at2g13560 : 458.0) Encodes an NAD-dependent malic enzyme (NAD-ME) that does not act on oxaloacetate, indicating that it belongs to EC 1.1.1.39. It is a member of the alpha family of NAD-MEs in plants. It appears to function as a homodimer or as a heterodimer with the beta-type NAD-ME2 (At4g00570). NAD-ME1 transcript and protein levels are higher during the night than during the day.; NAD-dependent malic enzyme 1 (NAD-ME1); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to salt stress, malate metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD-dependent malic enzyme 2 (TAIR:AT4G00570.1); Has 9465 Blast hits to 9448 proteins in 2440 species: Archae - 143; Bacteria - 6328; Metazoa - 607; Fungi - 221; Plants - 457; Viruses - 0; Other Eukaryotes - 1709 (source: NCBI BLink). & (gnl|cdd|36471 : 344.0) no description available & (gnl|cdd|86489 : 292.0) no description available & (reliability: 916.0) & (original description: Putative malA, Description = Malic enzyme, PFAM = PF03949)' T '8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'nbv0.5scaffold888_181348-243898' '(p37221|maom_soltu : 1099.0) NAD-dependent malic enzyme 62 kDa isoform, mitochondrial precursor (EC 1.1.1.39) (NAD-ME) - Solanum tuberosum (Potato) & (at2g13560 : 971.0) Encodes an NAD-dependent malic enzyme (NAD-ME) that does not act on oxaloacetate, indicating that it belongs to EC 1.1.1.39. It is a member of the alpha family of NAD-MEs in plants. It appears to function as a homodimer or as a heterodimer with the beta-type NAD-ME2 (At4g00570). NAD-ME1 transcript and protein levels are higher during the night than during the day.; NAD-dependent malic enzyme 1 (NAD-ME1); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to salt stress, malate metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD-dependent malic enzyme 2 (TAIR:AT4G00570.1); Has 9465 Blast hits to 9448 proteins in 2440 species: Archae - 143; Bacteria - 6328; Metazoa - 607; Fungi - 221; Plants - 457; Viruses - 0; Other Eukaryotes - 1709 (source: NCBI BLink). & (gnl|cdd|36471 : 763.0) no description available & (gnl|cdd|30629 : 315.0) no description available & (reliability: 1942.0) & (original description: Putative mae, Description = Malic enzyme, PFAM = PF00390;PF03949)' T '8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'niben044scf00000009ctg010_9243-13876' '(p36444|maoc_flapr : 706.0) NADP-dependent malic enzyme, chloroplast precursor (EC 1.1.1.40) (NADP-ME) - Flaveria pringlei & (at1g79750 : 686.0) The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME4 is localized to chloroplasts. The gene is expressed throughout the whole plant and during embryogenesis and germination. A possible involvement in the fatty acid biosynthesis has been proposed.; NADP-malic enzyme 4 (NADP-ME4); CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 3 (TAIR:AT5G25880.1); Has 9573 Blast hits to 9553 proteins in 2441 species: Archae - 143; Bacteria - 6332; Metazoa - 610; Fungi - 220; Plants - 473; Viruses - 0; Other Eukaryotes - 1795 (source: NCBI BLink). & (gnl|cdd|36471 : 615.0) no description available & (gnl|cdd|84742 : 294.0) no description available & (reliability: 1372.0) & (original description: Putative ME1, Description = Malic enzyme, PFAM = PF00390;PF03949)' T '8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'niben044scf00033312ctg001_1-3559' '(gnl|cdd|36471 : 300.0) no description available & (p51615|maox_vitvi : 298.0) NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME) - Vitis vinifera (Grape) & (at2g19900 : 268.0) The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME1 is expressed in response to developmental and cell-specific signals. The enzyme is active in vitro and appears to function as a homohexamer or homooctamer. It is believed to be a cytosolic protein.; NADP-malic enzyme 1 (NADP-ME1); FUNCTIONS IN: malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity, oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor, malic enzyme activity; INVOLVED IN: malate metabolic process, protein homooligomerization; LOCATED IN: cytosol; EXPRESSED IN: embryo, sperm cell, root, stamen, seed; EXPRESSED DURING: 4 anthesis, D bilateral stage; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 3 (TAIR:AT5G25880.1); Has 9392 Blast hits to 9373 proteins in 2414 species: Archae - 143; Bacteria - 6244; Metazoa - 609; Fungi - 220; Plants - 469; Viruses - 0; Other Eukaryotes - 1707 (source: NCBI BLink). & (gnl|cdd|86489 : 216.0) no description available & (reliability: 536.0) & (original description: Putative malA, Description = Malic enzyme, PFAM = PF03949)' T '8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'niben101scf00745_399168-409543' '(p51615|maox_vitvi : 994.0) NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME) - Vitis vinifera (Grape) & (at1g79750 : 972.0) The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME4 is localized to chloroplasts. The gene is expressed throughout the whole plant and during embryogenesis and germination. A possible involvement in the fatty acid biosynthesis has been proposed.; NADP-malic enzyme 4 (NADP-ME4); CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 3 (TAIR:AT5G25880.1); Has 9573 Blast hits to 9553 proteins in 2441 species: Archae - 143; Bacteria - 6332; Metazoa - 610; Fungi - 220; Plants - 473; Viruses - 0; Other Eukaryotes - 1795 (source: NCBI BLink). & (gnl|cdd|36471 : 911.0) no description available & (gnl|cdd|30629 : 342.0) no description available & (reliability: 1944.0) & (original description: Putative me1, Description = Malic enzyme, PFAM = PF00390;PF03949)' T '8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'niben101scf01374_1046570-1054872' '(p51615|maox_vitvi : 876.0) NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME) - Vitis vinifera (Grape) & (at1g79750 : 822.0) The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME4 is localized to chloroplasts. The gene is expressed throughout the whole plant and during embryogenesis and germination. A possible involvement in the fatty acid biosynthesis has been proposed.; NADP-malic enzyme 4 (NADP-ME4); CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 3 (TAIR:AT5G25880.1); Has 9573 Blast hits to 9553 proteins in 2441 species: Archae - 143; Bacteria - 6332; Metazoa - 610; Fungi - 220; Plants - 473; Viruses - 0; Other Eukaryotes - 1795 (source: NCBI BLink). & (gnl|cdd|36471 : 790.0) no description available & (gnl|cdd|84742 : 294.0) no description available & (reliability: 1644.0) & (original description: Putative MODA, Description = NADP-dependent malic enzyme, chloroplastic, PFAM = PF03949;PF03949;PF00390)' T '8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'niben101scf01681_1390279-1421172' '(p37221|maom_soltu : 518.0) NAD-dependent malic enzyme 62 kDa isoform, mitochondrial precursor (EC 1.1.1.39) (NAD-ME) - Solanum tuberosum (Potato) & (at2g13560 : 461.0) Encodes an NAD-dependent malic enzyme (NAD-ME) that does not act on oxaloacetate, indicating that it belongs to EC 1.1.1.39. It is a member of the alpha family of NAD-MEs in plants. It appears to function as a homodimer or as a heterodimer with the beta-type NAD-ME2 (At4g00570). NAD-ME1 transcript and protein levels are higher during the night than during the day.; NAD-dependent malic enzyme 1 (NAD-ME1); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to salt stress, malate metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD-dependent malic enzyme 2 (TAIR:AT4G00570.1); Has 9465 Blast hits to 9448 proteins in 2440 species: Archae - 143; Bacteria - 6328; Metazoa - 607; Fungi - 221; Plants - 457; Viruses - 0; Other Eukaryotes - 1709 (source: NCBI BLink). & (gnl|cdd|36471 : 342.0) no description available & (gnl|cdd|86489 : 292.0) no description available & (reliability: 922.0) & (original description: Putative malA, Description = Malic enzyme, PFAM = PF03949)' T '8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'niben101scf01881_124942-194781' '(p37221|maom_soltu : 1075.0) NAD-dependent malic enzyme 62 kDa isoform, mitochondrial precursor (EC 1.1.1.39) (NAD-ME) - Solanum tuberosum (Potato) & (at2g13560 : 968.0) Encodes an NAD-dependent malic enzyme (NAD-ME) that does not act on oxaloacetate, indicating that it belongs to EC 1.1.1.39. It is a member of the alpha family of NAD-MEs in plants. It appears to function as a homodimer or as a heterodimer with the beta-type NAD-ME2 (At4g00570). NAD-ME1 transcript and protein levels are higher during the night than during the day.; NAD-dependent malic enzyme 1 (NAD-ME1); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to salt stress, malate metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD-dependent malic enzyme 2 (TAIR:AT4G00570.1); Has 9465 Blast hits to 9448 proteins in 2440 species: Archae - 143; Bacteria - 6328; Metazoa - 607; Fungi - 221; Plants - 457; Viruses - 0; Other Eukaryotes - 1709 (source: NCBI BLink). & (gnl|cdd|36471 : 765.0) no description available & (gnl|cdd|30629 : 316.0) no description available & (reliability: 1936.0) & (original description: Putative mae, Description = Malic enzyme, PFAM = PF00390;PF03949)' T '8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'niben101scf02217_776411-785077' '(p51615|maox_vitvi : 1021.0) NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME) - Vitis vinifera (Grape) & (at1g79750 : 1001.0) The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME4 is localized to chloroplasts. The gene is expressed throughout the whole plant and during embryogenesis and germination. A possible involvement in the fatty acid biosynthesis has been proposed.; NADP-malic enzyme 4 (NADP-ME4); CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 3 (TAIR:AT5G25880.1); Has 9573 Blast hits to 9553 proteins in 2441 species: Archae - 143; Bacteria - 6332; Metazoa - 610; Fungi - 220; Plants - 473; Viruses - 0; Other Eukaryotes - 1795 (source: NCBI BLink). & (gnl|cdd|36471 : 912.0) no description available & (gnl|cdd|30629 : 341.0) no description available & (reliability: 2002.0) & (original description: Putative MOD1, Description = NADP-dependent malic enzyme, PFAM = PF03949;PF00390)' T '8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'niben101scf02497_161767-176096' '(p37225|maon_soltu : 1045.0) NAD-dependent malic enzyme 59 kDa isoform, mitochondrial precursor (EC 1.1.1.39) (NAD-ME) - Solanum tuberosum (Potato) & (at4g00570 : 879.0) Encodes an NAD-dependent malic enzyme (NAD-ME) that does not act on oxaloacetate, indicating that it belongs to EC 1.1.1.39. It is a member of the beta family of NAD-MEs in plants. It appears to function as a homodimer or as a heterodimer with the alpha-type NAD-ME2 (At2g13560). NAD-ME2 transcript and protein levels are higher during the night than during the day.; NAD-dependent malic enzyme 2 (NAD-ME2); FUNCTIONS IN: in 7 functions; INVOLVED IN: malate metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD-dependent malic enzyme 1 (TAIR:AT2G13560.1); Has 9343 Blast hits to 9326 proteins in 2439 species: Archae - 143; Bacteria - 6323; Metazoa - 607; Fungi - 223; Plants - 463; Viruses - 0; Other Eukaryotes - 1584 (source: NCBI BLink). & (gnl|cdd|36471 : 746.0) no description available & (gnl|cdd|30629 : 304.0) no description available & (reliability: 1758.0) & (original description: Putative mae, Description = Malic enzyme, PFAM = PF03949;PF00390)' T '8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'niben101scf03942_245742-254507' '(p36444|maoc_flapr : 1026.0) NADP-dependent malic enzyme, chloroplast precursor (EC 1.1.1.40) (NADP-ME) - Flaveria pringlei & (at1g79750 : 965.0) The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME4 is localized to chloroplasts. The gene is expressed throughout the whole plant and during embryogenesis and germination. A possible involvement in the fatty acid biosynthesis has been proposed.; NADP-malic enzyme 4 (NADP-ME4); CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 3 (TAIR:AT5G25880.1); Has 9573 Blast hits to 9553 proteins in 2441 species: Archae - 143; Bacteria - 6332; Metazoa - 610; Fungi - 220; Plants - 473; Viruses - 0; Other Eukaryotes - 1795 (source: NCBI BLink). & (gnl|cdd|36471 : 907.0) no description available & (gnl|cdd|86489 : 334.0) no description available & (reliability: 1930.0) & (original description: Putative me2, Description = Malic enzyme, PFAM = PF00390;PF03949)' T '8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'niben101scf05089_20865-30330' '(p36444|maoc_flapr : 1030.0) NADP-dependent malic enzyme, chloroplast precursor (EC 1.1.1.40) (NADP-ME) - Flaveria pringlei & (at1g79750 : 966.0) The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME4 is localized to chloroplasts. The gene is expressed throughout the whole plant and during embryogenesis and germination. A possible involvement in the fatty acid biosynthesis has been proposed.; NADP-malic enzyme 4 (NADP-ME4); CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 3 (TAIR:AT5G25880.1); Has 9573 Blast hits to 9553 proteins in 2441 species: Archae - 143; Bacteria - 6332; Metazoa - 610; Fungi - 220; Plants - 473; Viruses - 0; Other Eukaryotes - 1795 (source: NCBI BLink). & (gnl|cdd|36471 : 908.0) no description available & (gnl|cdd|86489 : 337.0) no description available & (reliability: 1932.0) & (original description: Putative me1, Description = Malic enzyme, PFAM = PF03949;PF00390)' T '8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'niben101scf07516_10689-21756' '(p37225|maon_soltu : 1053.0) NAD-dependent malic enzyme 59 kDa isoform, mitochondrial precursor (EC 1.1.1.39) (NAD-ME) - Solanum tuberosum (Potato) & (at4g00570 : 885.0) Encodes an NAD-dependent malic enzyme (NAD-ME) that does not act on oxaloacetate, indicating that it belongs to EC 1.1.1.39. It is a member of the beta family of NAD-MEs in plants. It appears to function as a homodimer or as a heterodimer with the alpha-type NAD-ME2 (At2g13560). NAD-ME2 transcript and protein levels are higher during the night than during the day.; NAD-dependent malic enzyme 2 (NAD-ME2); FUNCTIONS IN: in 7 functions; INVOLVED IN: malate metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD-dependent malic enzyme 1 (TAIR:AT2G13560.1); Has 9343 Blast hits to 9326 proteins in 2439 species: Archae - 143; Bacteria - 6323; Metazoa - 607; Fungi - 223; Plants - 463; Viruses - 0; Other Eukaryotes - 1584 (source: NCBI BLink). & (gnl|cdd|36471 : 750.0) no description available & (gnl|cdd|30629 : 302.0) no description available & (reliability: 1770.0) & (original description: Putative mae, Description = Malic enzyme, PFAM = PF00390;PF03949)' T '8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'niben101scf10055_774088-780507' '(p51615|maox_vitvi : 1040.0) NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME) - Vitis vinifera (Grape) & (at5g25880 : 969.0) The malic enzyme (EC 1.1.1.40) encoded by the ATNADP-ME3 is presumably cytosolic and restricted in its expression by both developmental and cell-specific signals.; NADP-malic enzyme 3 (NADP-ME3); FUNCTIONS IN: malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity, oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor, malic enzyme activity; INVOLVED IN: N-terminal protein myristoylation, malate metabolic process, protein homooligomerization; LOCATED IN: cytosol; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 2 (TAIR:AT5G11670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36471 : 896.0) no description available & (gnl|cdd|30629 : 339.0) no description available & (reliability: 1938.0) & (original description: Putative me1, Description = Malic enzyme, PFAM = PF00390;PF03949)' T '8.2.11' 'TCA / org transformation.other organic acid transformatons.atp-citrate lyase' 'nbv0.3scaffold9033_6049-12462' '(at5g49460 : 1012.0) One of the two genes encoding subunit B of the cytosolic enzyme ATP Citrate Lyase (ACL); ATP citrate lyase subunit B 2 (ACLB-2); FUNCTIONS IN: ATP citrate synthase activity; INVOLVED IN: acetyl-CoA biosynthetic process; LOCATED IN: cytosol, citrate lyase complex, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), Citrate synthase-like, small alpha subdomain (InterPro:IPR016143), Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), Citrate synthase-like, core (InterPro:IPR016141), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), Citrate synthase-like (InterPro:IPR002020), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase B-1 (TAIR:AT3G06650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36468 : 742.0) no description available & (gnl|cdd|30423 : 140.0) no description available & (reliability: 2024.0) & (original description: Putative acl1, Description = ATP-citrate (pro-S-)-lyase, PFAM = PF00285;PF00549)' T '8.2.11' 'TCA / org transformation.other organic acid transformatons.atp-citrate lyase' 'nbv0.3scaffold80329_183-6931' '(at1g09430 : 717.0) Encodes subunit A of the heteromeric enzyme ATP citrate lyase (ACL). In animals, ACL is encoded by a single gene; ACL in Arabidopsis is composed of two polypeptides, ACLA (encoded by 3 genes) and ACLB (encoded by 2 genes). The holoenzyme has an A(4)B(4)stoichiometry. Expression of both ACLA and ACLB but not of either of the subunits alone results in ACL activity.; ATP-citrate lyase A-3 (ACLA-3); CONTAINS InterPro DOMAIN/s: ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4); Has 5303 Blast hits to 5302 proteins in 1635 species: Archae - 133; Bacteria - 3235; Metazoa - 230; Fungi - 139; Plants - 96; Viruses - 0; Other Eukaryotes - 1470 (source: NCBI BLink). & (gnl|cdd|36468 : 482.0) no description available & (gnl|cdd|30394 : 159.0) no description available & (reliability: 1434.0) & (original description: Putative aclA, Description = ATP-citrate synthase, PFAM = PF08442;PF16114)' T '8.2.11' 'TCA / org transformation.other organic acid transformatons.atp-citrate lyase' 'niben044scf00022234ctg007_289-7048' '(at5g49460 : 1112.0) One of the two genes encoding subunit B of the cytosolic enzyme ATP Citrate Lyase (ACL); ATP citrate lyase subunit B 2 (ACLB-2); FUNCTIONS IN: ATP citrate synthase activity; INVOLVED IN: acetyl-CoA biosynthetic process; LOCATED IN: cytosol, citrate lyase complex, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), Citrate synthase-like, small alpha subdomain (InterPro:IPR016143), Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), Citrate synthase-like, core (InterPro:IPR016141), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), Citrate synthase-like (InterPro:IPR002020), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase B-1 (TAIR:AT3G06650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36468 : 821.0) no description available & (gnl|cdd|30423 : 191.0) no description available & (q6zl94|suca_orysa : 100.0) Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase subunit alpha) (SCS-alpha) - Oryza sativa (Rice) & (reliability: 2224.0) & (original description: Putative acl1, Description = ATP-citrate (pro-S-)-lyase, PFAM = PF00285;PF00549)' T '8.2.11' 'TCA / org transformation.other organic acid transformatons.atp-citrate lyase' 'niben044scf00023393ctg006_1-5930' '(at1g09430 : 769.0) Encodes subunit A of the heteromeric enzyme ATP citrate lyase (ACL). In animals, ACL is encoded by a single gene; ACL in Arabidopsis is composed of two polypeptides, ACLA (encoded by 3 genes) and ACLB (encoded by 2 genes). The holoenzyme has an A(4)B(4)stoichiometry. Expression of both ACLA and ACLB but not of either of the subunits alone results in ACL activity.; ATP-citrate lyase A-3 (ACLA-3); CONTAINS InterPro DOMAIN/s: ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4); Has 5303 Blast hits to 5302 proteins in 1635 species: Archae - 133; Bacteria - 3235; Metazoa - 230; Fungi - 139; Plants - 96; Viruses - 0; Other Eukaryotes - 1470 (source: NCBI BLink). & (gnl|cdd|36468 : 481.0) no description available & (gnl|cdd|30394 : 162.0) no description available & (reliability: 1538.0) & (original description: Putative aclA, Description = ATP-citrate synthase, PFAM = PF16114;PF08442)' T '8.2.11' 'TCA / org transformation.other organic acid transformatons.atp-citrate lyase' 'niben044scf00043817ctg001_159-7122' '(at5g49460 : 1009.0) One of the two genes encoding subunit B of the cytosolic enzyme ATP Citrate Lyase (ACL); ATP citrate lyase subunit B 2 (ACLB-2); FUNCTIONS IN: ATP citrate synthase activity; INVOLVED IN: acetyl-CoA biosynthetic process; LOCATED IN: cytosol, citrate lyase complex, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), Citrate synthase-like, small alpha subdomain (InterPro:IPR016143), Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), Citrate synthase-like, core (InterPro:IPR016141), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), Citrate synthase-like (InterPro:IPR002020), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase B-1 (TAIR:AT3G06650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36468 : 741.0) no description available & (gnl|cdd|30423 : 136.0) no description available & (reliability: 2018.0) & (original description: Putative acl1, Description = ATP-citrate (pro-S-)-lyase, PFAM = PF00285;PF00549)' T '8.2.11' 'TCA / org transformation.other organic acid transformatons.atp-citrate lyase' 'niben101scf00231_688446-694904' '(at1g60810 : 755.0) One of the three genes encoding subunit A of the trimeric enzyme ATP Citrate lyase; ATP-citrate lyase A-2 (ACLA-2); CONTAINS InterPro DOMAIN/s: ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4); Has 5556 Blast hits to 5555 proteins in 1577 species: Archae - 133; Bacteria - 3078; Metazoa - 348; Fungi - 198; Plants - 97; Viruses - 0; Other Eukaryotes - 1702 (source: NCBI BLink). & (gnl|cdd|36468 : 480.0) no description available & (gnl|cdd|30394 : 166.0) no description available & (reliability: 1510.0) & (original description: Putative aclb, Description = ATP citrate lyase b-subunit, PFAM = PF16114;PF08442)' T '8.2.11' 'TCA / org transformation.other organic acid transformatons.atp-citrate lyase' 'niben101scf01934_536509-543464' '(at3g06650 : 1009.0) One of the two genes encoding subunit B of the trimeric enzyme ATP Citrate lyase; ATP-citrate lyase B-1 (ACLB-1); FUNCTIONS IN: ATP citrate synthase activity; INVOLVED IN: acetyl-CoA biosynthetic process; LOCATED IN: citrate lyase complex, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), Citrate synthase-like, small alpha subdomain (InterPro:IPR016143), Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), CoA-binding (InterPro:IPR003781), Citrate synthase-like, core (InterPro:IPR016141), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), Citrate synthase-like (InterPro:IPR002020), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP citrate lyase subunit B 2 (TAIR:AT5G49460.1); Has 8069 Blast hits to 8065 proteins in 2074 species: Archae - 271; Bacteria - 4029; Metazoa - 557; Fungi - 289; Plants - 162; Viruses - 0; Other Eukaryotes - 2761 (source: NCBI BLink). & (gnl|cdd|36468 : 743.0) no description available & (gnl|cdd|30423 : 137.0) no description available & (reliability: 2018.0) & (original description: Putative acl1, Description = ATP-citrate (pro-S-)-lyase, PFAM = PF00285;PF00549)' T '8.2.11' 'TCA / org transformation.other organic acid transformatons.atp-citrate lyase' 'niben101scf03045_749005-755248' '(at1g60810 : 761.0) One of the three genes encoding subunit A of the trimeric enzyme ATP Citrate lyase; ATP-citrate lyase A-2 (ACLA-2); CONTAINS InterPro DOMAIN/s: ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4); Has 5556 Blast hits to 5555 proteins in 1577 species: Archae - 133; Bacteria - 3078; Metazoa - 348; Fungi - 198; Plants - 97; Viruses - 0; Other Eukaryotes - 1702 (source: NCBI BLink). & (gnl|cdd|36468 : 486.0) no description available & (gnl|cdd|30394 : 168.0) no description available & (reliability: 1522.0) & (original description: Putative aclb, Description = ATP citrate lyase b-subunit, PFAM = PF08442;PF16114)' T '8.2.11' 'TCA / org transformation.other organic acid transformatons.atp-citrate lyase' 'niben101scf03905_143316-150067' '(at5g49460 : 1116.0) One of the two genes encoding subunit B of the cytosolic enzyme ATP Citrate Lyase (ACL); ATP citrate lyase subunit B 2 (ACLB-2); FUNCTIONS IN: ATP citrate synthase activity; INVOLVED IN: acetyl-CoA biosynthetic process; LOCATED IN: cytosol, citrate lyase complex, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), Citrate synthase-like, small alpha subdomain (InterPro:IPR016143), Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), Citrate synthase-like, core (InterPro:IPR016141), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), Citrate synthase-like (InterPro:IPR002020), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase B-1 (TAIR:AT3G06650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36468 : 828.0) no description available & (gnl|cdd|30423 : 187.0) no description available & (q6zl94|suca_orysa : 97.1) Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase subunit alpha) (SCS-alpha) - Oryza sativa (Rice) & (reliability: 2232.0) & (original description: Putative acl1, Description = ATP-citrate (pro-S-)-lyase, PFAM = PF00549;PF00285)' T '8.2.11' 'TCA / org transformation.other organic acid transformatons.atp-citrate lyase' 'niben101scf04287_642259-648215' '(at1g60810 : 761.0) One of the three genes encoding subunit A of the trimeric enzyme ATP Citrate lyase; ATP-citrate lyase A-2 (ACLA-2); CONTAINS InterPro DOMAIN/s: ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4); Has 5556 Blast hits to 5555 proteins in 1577 species: Archae - 133; Bacteria - 3078; Metazoa - 348; Fungi - 198; Plants - 97; Viruses - 0; Other Eukaryotes - 1702 (source: NCBI BLink). & (gnl|cdd|36468 : 479.0) no description available & (gnl|cdd|30394 : 172.0) no description available & (reliability: 1522.0) & (original description: Putative aclb, Description = ATP citrate lyase b-subunit, PFAM = PF08442;PF16114)' T '8.2.99' 'TCA / org transformation.other organic acid transformatons.misc' 'niben101scf10735_749-7048' '(at1g79440 : 715.0) Encodes a mitochondrial succinic semialdehyde dehydrogenase (SSADH). Nomenclature according to Kirch, et al (2004).; aldehyde dehydrogenase 5F1 (ALDH5F1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, NAD or NADH binding, copper ion binding, succinate-semialdehyde dehydrogenase activity; INVOLVED IN: in 6 processes; LOCATED IN: mitochondrion, chloroplast, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160), Succinic semialdehyde dehydrogenase (InterPro:IPR010102); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B4 (TAIR:AT3G48000.1); Has 62487 Blast hits to 62143 proteins in 3037 species: Archae - 481; Bacteria - 36218; Metazoa - 2614; Fungi - 2131; Plants - 1502; Viruses - 0; Other Eukaryotes - 19541 (source: NCBI BLink). & (gnl|cdd|37662 : 663.0) no description available & (gnl|cdd|78410 : 560.0) no description available & (o24174|badh_orysa : 311.0) Betaine-aldehyde dehydrogenase (EC 1.2.1.8) (BADH) - Oryza sativa (Rice) & (reliability: 1430.0) & (original description: Putative davD, Description = Succinate-semialdehyde dehydrogenase, PFAM = PF00171)' T '8.2.99' 'TCA / org transformation.other organic acid transformatons.misc' 'niben101scf22954_49659-61159' '(at1g79440 : 769.0) Encodes a mitochondrial succinic semialdehyde dehydrogenase (SSADH). Nomenclature according to Kirch, et al (2004).; aldehyde dehydrogenase 5F1 (ALDH5F1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, NAD or NADH binding, copper ion binding, succinate-semialdehyde dehydrogenase activity; INVOLVED IN: in 6 processes; LOCATED IN: mitochondrion, chloroplast, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160), Succinic semialdehyde dehydrogenase (InterPro:IPR010102); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B4 (TAIR:AT3G48000.1); Has 62487 Blast hits to 62143 proteins in 3037 species: Archae - 481; Bacteria - 36218; Metazoa - 2614; Fungi - 2131; Plants - 1502; Viruses - 0; Other Eukaryotes - 19541 (source: NCBI BLink). & (gnl|cdd|37662 : 712.0) no description available & (gnl|cdd|78410 : 602.0) no description available & (o24174|badh_orysa : 335.0) Betaine-aldehyde dehydrogenase (EC 1.2.1.8) (BADH) - Oryza sativa (Rice) & (reliability: 1538.0) & (original description: Putative davD, Description = Succinate-semialdehyde dehydrogenase, PFAM = PF00171)' T '8.2.1001' 'TCA / org transformation.Various' '2-methylcitrate' 'Propanoate metabolism in bacteria' M '8.2.1002' 'TCA / org transformation.Various' '2-oxogluconate' '' M '8.2.1003' 'TCA / org transformation.Various' 'oxalate' '' M '8.2.1004' 'TCA / org transformation.Various' 'suberate' 'Also called cork acid, octanedioic acid' M '8.2.1005' 'TCA / org transformation.Various' 'itaconate' '' M '8.3' 'TCA / org transformation.carbonic anhydrases' 'nbv0.3scaffold2236_46289-50029' '(at1g08080 : 301.0) alpha carbonic anhydrase 7 (ACA7); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 5 (TAIR:AT1G08065.1); Has 3434 Blast hits to 3405 proteins in 557 species: Archae - 0; Bacteria - 714; Metazoa - 2114; Fungi - 83; Plants - 330; Viruses - 6; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|28766 : 260.0) no description available & (gnl|cdd|35603 : 192.0) no description available & (reliability: 602.0) & (original description: Putative NEC3, Description = Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3, PFAM = PF00194)' T '8.3' 'TCA / org transformation.carbonic anhydrases' 'nbv0.3scaffold3015_56075-67054' '(at1g08080 : 251.0) alpha carbonic anhydrase 7 (ACA7); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 5 (TAIR:AT1G08065.1); Has 3434 Blast hits to 3405 proteins in 557 species: Archae - 0; Bacteria - 714; Metazoa - 2114; Fungi - 83; Plants - 330; Viruses - 6; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|28766 : 228.0) no description available & (gnl|cdd|35603 : 169.0) no description available & (reliability: 502.0) & (original description: Putative caa1, Description = Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3, PFAM = PF00194)' T '8.3' 'TCA / org transformation.carbonic anhydrases' 'nbv0.5scaffold1059_118831-122061' '(at4g20990 : 181.0) alpha carbonic anhydrase 4 (ACA4); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338), Carbonic anhydrase, CAH1-like (InterPro:IPR018340); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 6 (TAIR:AT4G21000.1); Has 3359 Blast hits to 3345 proteins in 546 species: Archae - 0; Bacteria - 694; Metazoa - 2070; Fungi - 83; Plants - 327; Viruses - 4; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|28766 : 122.0) no description available & (gnl|cdd|35603 : 80.1) no description available & (reliability: 362.0) & (original description: Putative caa1, Description = Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3, PFAM = PF00194;PF00194)' T '8.3' 'TCA / org transformation.carbonic anhydrases' 'nbv0.5scaffold1607_66751-70098' '(at1g08080 : 231.0) alpha carbonic anhydrase 7 (ACA7); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 5 (TAIR:AT1G08065.1); Has 3434 Blast hits to 3405 proteins in 557 species: Archae - 0; Bacteria - 714; Metazoa - 2114; Fungi - 83; Plants - 330; Viruses - 6; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|28766 : 199.0) no description available & (gnl|cdd|35603 : 155.0) no description available & (reliability: 462.0) & (original description: Putative caa1, Description = Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3, PFAM = PF00194)' T '8.3' 'TCA / org transformation.carbonic anhydrases' 'nbv0.5scaffold2643_62310-68109' '(gnl|cdd|28766 : 211.0) no description available & (at1g08080 : 193.0) alpha carbonic anhydrase 7 (ACA7); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 5 (TAIR:AT1G08065.1); Has 3434 Blast hits to 3405 proteins in 557 species: Archae - 0; Bacteria - 714; Metazoa - 2114; Fungi - 83; Plants - 330; Viruses - 6; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|35603 : 174.0) no description available & (reliability: 386.0) & (original description: Putative NEC3, Description = Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3, PFAM = PF00194;PF00194)' T '8.3' 'TCA / org transformation.carbonic anhydrases' 'nbv0.5scaffold4152_202694-206594' '(p27141|cahc_tobac : 375.0) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) - Nicotiana tabacum (Common tobacco) & (at3g01500 : 344.0) Encodes a putative beta-carbonic anhydrase betaCA1. Together with betaCA4 (At1g70410) regulates CO2-controlled stomatal movements in guard cells.; carbonic anhydrase 1 (CA1); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: carbonic anhydrase 2 (TAIR:AT5G14740.1); Has 5138 Blast hits to 5121 proteins in 1526 species: Archae - 36; Bacteria - 3970; Metazoa - 59; Fungi - 207; Plants - 363; Viruses - 0; Other Eukaryotes - 503 (source: NCBI BLink). & (gnl|cdd|48223 : 257.0) no description available & (gnl|cdd|36791 : 247.0) no description available & (reliability: 688.0) & (original description: Putative ca1, Description = Carbonate dehydratase, PFAM = PF00484)' T '8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf00259_118450-123518' '(at4g20990 : 269.0) alpha carbonic anhydrase 4 (ACA4); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338), Carbonic anhydrase, CAH1-like (InterPro:IPR018340); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 6 (TAIR:AT4G21000.1); Has 3359 Blast hits to 3345 proteins in 546 species: Archae - 0; Bacteria - 694; Metazoa - 2070; Fungi - 83; Plants - 327; Viruses - 4; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|28766 : 252.0) no description available & (gnl|cdd|35603 : 176.0) no description available & (reliability: 538.0) & (original description: Putative ACA4, Description = Alpha carbonic anhydrase 4, PFAM = PF00194)' T '8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf01155_127239-139869' '(p27141|cahc_tobac : 363.0) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) - Nicotiana tabacum (Common tobacco) & (at1g70410 : 354.0) Encodes a putative beta-carbonic anhydrase betaCA4. Together with betaCA1 (At3g01500) regulates CO2-controlled stomatal movements in guard cells.; beta carbonic anhydrase 4 (BCA4); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: response to carbon dioxide, carbon utilization, regulation of stomatal movement; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: beta carbonic anhydrase 3 (TAIR:AT1G23730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36791 : 293.0) no description available & (gnl|cdd|48223 : 270.0) no description available & (reliability: 708.0) & (original description: Putative ca1, Description = Carbonic anhydrase, PFAM = PF00484)' T '8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf01890_416454-420175' '(at1g08080 : 312.0) alpha carbonic anhydrase 7 (ACA7); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 5 (TAIR:AT1G08065.1); Has 3434 Blast hits to 3405 proteins in 557 species: Archae - 0; Bacteria - 714; Metazoa - 2114; Fungi - 83; Plants - 330; Viruses - 6; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|28766 : 266.0) no description available & (gnl|cdd|35603 : 193.0) no description available & (reliability: 624.0) & (original description: Putative ACA7, Description = Alpha carbonic anhydrase 7, PFAM = PF00194)' T '8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf02502_759840-770628' '(at1g08080 : 288.0) alpha carbonic anhydrase 7 (ACA7); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 5 (TAIR:AT1G08065.1); Has 3434 Blast hits to 3405 proteins in 557 species: Archae - 0; Bacteria - 714; Metazoa - 2114; Fungi - 83; Plants - 330; Viruses - 6; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|28766 : 253.0) no description available & (gnl|cdd|35603 : 200.0) no description available & (reliability: 576.0) & (original description: Putative ACA7, Description = Alpha carbonic anhydrase 7, PFAM = PF00194)' T '8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf02502_765801-768338' '(at1g08080 : 113.0) alpha carbonic anhydrase 7 (ACA7); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 5 (TAIR:AT1G08065.1); Has 3434 Blast hits to 3405 proteins in 557 species: Archae - 0; Bacteria - 714; Metazoa - 2114; Fungi - 83; Plants - 330; Viruses - 6; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|28766 : 111.0) no description available & (reliability: 226.0) & (original description: Putative caa1, Description = Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3, PFAM = PF00194)' T '8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf03302_253553-258196' '(at1g08080 : 333.0) alpha carbonic anhydrase 7 (ACA7); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 5 (TAIR:AT1G08065.1); Has 3434 Blast hits to 3405 proteins in 557 species: Archae - 0; Bacteria - 714; Metazoa - 2114; Fungi - 83; Plants - 330; Viruses - 6; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|28766 : 256.0) no description available & (gnl|cdd|35603 : 193.0) no description available & (reliability: 666.0) & (original description: Putative NEC3, Description = Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3, PFAM = PF00194)' T '8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf03302_254849-257947' '(at1g08080 : 208.0) alpha carbonic anhydrase 7 (ACA7); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 5 (TAIR:AT1G08065.1); Has 3434 Blast hits to 3405 proteins in 557 species: Archae - 0; Bacteria - 714; Metazoa - 2114; Fungi - 83; Plants - 330; Viruses - 6; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|28766 : 185.0) no description available & (gnl|cdd|35603 : 137.0) no description available & (reliability: 416.0) & (original description: Putative caa1, Description = Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3, PFAM = PF00194)' T '8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf03766_892610-896821' '(p27141|cahc_tobac : 368.0) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) - Nicotiana tabacum (Common tobacco) & (at3g01500 : 334.0) Encodes a putative beta-carbonic anhydrase betaCA1. Together with betaCA4 (At1g70410) regulates CO2-controlled stomatal movements in guard cells.; carbonic anhydrase 1 (CA1); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: carbonic anhydrase 2 (TAIR:AT5G14740.1); Has 5138 Blast hits to 5121 proteins in 1526 species: Archae - 36; Bacteria - 3970; Metazoa - 59; Fungi - 207; Plants - 363; Viruses - 0; Other Eukaryotes - 503 (source: NCBI BLink). & (gnl|cdd|48223 : 243.0) no description available & (gnl|cdd|36791 : 234.0) no description available & (reliability: 668.0) & (original description: Putative ca3, Description = Carbonic anhydrase, PFAM = PF00484)' T '8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf06349_65184-71357' '(p27141|cahc_tobac : 553.0) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) - Nicotiana tabacum (Common tobacco) & (at3g01500 : 404.0) Encodes a putative beta-carbonic anhydrase betaCA1. Together with betaCA4 (At1g70410) regulates CO2-controlled stomatal movements in guard cells.; carbonic anhydrase 1 (CA1); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: carbonic anhydrase 2 (TAIR:AT5G14740.1); Has 5138 Blast hits to 5121 proteins in 1526 species: Archae - 36; Bacteria - 3970; Metazoa - 59; Fungi - 207; Plants - 363; Viruses - 0; Other Eukaryotes - 503 (source: NCBI BLink). & (gnl|cdd|36791 : 297.0) no description available & (gnl|cdd|48223 : 265.0) no description available & (reliability: 808.0) & (original description: Putative ca1, Description = Carbonate dehydratase, PFAM = PF00484)' T '8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf06999_246910-253151' '(gnl|cdd|28766 : 245.0) no description available & (at1g08080 : 229.0) alpha carbonic anhydrase 7 (ACA7); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 5 (TAIR:AT1G08065.1); Has 3434 Blast hits to 3405 proteins in 557 species: Archae - 0; Bacteria - 714; Metazoa - 2114; Fungi - 83; Plants - 330; Viruses - 6; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|35603 : 190.0) no description available & (reliability: 458.0) & (original description: Putative caa1, Description = Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3, PFAM = PF00194)' T '8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf08637_179404-186772' '(p27141|cahc_tobac : 360.0) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) - Nicotiana tabacum (Common tobacco) & (at5g14740 : 357.0) Encodes a beta carbonic anhydrase likely to be localized in the cytoplasm. Expression of its mRNA is seen in etiolated seedlings and points to a possible nonphotosynthetic role for this isoform.; carbonic anhydrase 2 (CA2); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: defense response to bacterium, carbon utilization; LOCATED IN: cytosol, chloroplast thylakoid membrane, apoplast, chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: carbonic anhydrase 1 (TAIR:AT3G01500.2); Has 5023 Blast hits to 5008 proteins in 1512 species: Archae - 36; Bacteria - 3889; Metazoa - 60; Fungi - 203; Plants - 352; Viruses - 0; Other Eukaryotes - 483 (source: NCBI BLink). & (gnl|cdd|36791 : 294.0) no description available & (gnl|cdd|48223 : 269.0) no description available & (reliability: 714.0) & (original description: Putative ca1, Description = Carbonic anhydrase, PFAM = PF00484)' T '8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf09253_99291-106993' '(p27141|cahc_tobac : 555.0) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) - Nicotiana tabacum (Common tobacco) & (at3g01500 : 403.0) Encodes a putative beta-carbonic anhydrase betaCA1. Together with betaCA4 (At1g70410) regulates CO2-controlled stomatal movements in guard cells.; carbonic anhydrase 1 (CA1); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: carbonic anhydrase 2 (TAIR:AT5G14740.1); Has 5138 Blast hits to 5121 proteins in 1526 species: Archae - 36; Bacteria - 3970; Metazoa - 59; Fungi - 207; Plants - 363; Viruses - 0; Other Eukaryotes - 503 (source: NCBI BLink). & (gnl|cdd|36791 : 297.0) no description available & (gnl|cdd|48223 : 263.0) no description available & (reliability: 806.0) & (original description: Putative BCA1, Description = Beta carbonic anhydrase 1, chloroplastic, PFAM = PF00484)' T '8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf13995_135569-142099' '(at4g33580 : 269.0) beta carbonic anhydrase 5 (BCA5); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: carbon utilization; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: beta carbonic anhydrase 6 (TAIR:AT1G58180.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|48223 : 258.0) no description available & (gnl|cdd|36791 : 243.0) no description available & (p17067|cahc_pea : 194.0) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) [Contains: Carbonic anhydrase, 27 kDa isoform; Carbonic anhydrase, 25 kDa isoform] - Pisum sativum (Garden pea) & (reliability: 538.0) & (original description: Putative BCA5, Description = Beta carbonic anhydrase 5, chloroplastic, PFAM = PF00484)' T '8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf14591_194410-212027' '(at3g52720 : 268.0) Encodes a putative alpha carbonic anhydrase (CAH1) located in the chloroplast stroma. Most chloroplast proteins are encoded by the nuclear genome and imported with the help of sorting signals that are intrinsic parts of the polypeptides. CAH1 takes an alternative route through the secretory pathway, and becomes N-glycosylated before entering the chloroplast.; alpha carbonic anhydrase 1 (ACA1); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: chloroplast stroma; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 2 (TAIR:AT2G28210.1); Has 3162 Blast hits to 3153 proteins in 518 species: Archae - 0; Bacteria - 691; Metazoa - 1922; Fungi - 83; Plants - 314; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (gnl|cdd|28766 : 237.0) no description available & (gnl|cdd|35603 : 174.0) no description available & (reliability: 536.0) & (original description: Putative ACA1, Description = Alpha carbonic anhydrase 1, chloroplastic, PFAM = PF00194)' T '8.3' 'TCA / org transformation.carbonic anhydrases' 'niben101scf16378_266262-270017' '(p27141|cahc_tobac : 374.0) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) - Nicotiana tabacum (Common tobacco) & (at5g14740 : 343.0) Encodes a beta carbonic anhydrase likely to be localized in the cytoplasm. Expression of its mRNA is seen in etiolated seedlings and points to a possible nonphotosynthetic role for this isoform.; carbonic anhydrase 2 (CA2); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: defense response to bacterium, carbon utilization; LOCATED IN: cytosol, chloroplast thylakoid membrane, apoplast, chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: carbonic anhydrase 1 (TAIR:AT3G01500.2); Has 5023 Blast hits to 5008 proteins in 1512 species: Archae - 36; Bacteria - 3889; Metazoa - 60; Fungi - 203; Plants - 352; Viruses - 0; Other Eukaryotes - 483 (source: NCBI BLink). & (gnl|cdd|48223 : 258.0) no description available & (gnl|cdd|36791 : 250.0) no description available & (reliability: 686.0) & (original description: Putative ca1, Description = Carbonic anhydrase, PFAM = PF00484)' T '9' 'mitochondrial electron transport / ATP synthesis' 'nbv0.3scaffold39937_11800-17424' '(at4g34700 : 179.0) LYR family of Fe/S cluster biogenesis protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: photorespiration; LOCATED IN: mitochondrial membrane, plasma membrane, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38676 : 116.0) no description available & (reliability: 358.0) & (original description: Putative CIB22, Description = NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9, PFAM = PF05347)' T '9' 'mitochondrial electron transport / ATP synthesis' 'nbv0.5scaffold3558_2532-8365' '(at4g34700 : 178.0) LYR family of Fe/S cluster biogenesis protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: photorespiration; LOCATED IN: mitochondrial membrane, plasma membrane, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38676 : 117.0) no description available & (reliability: 356.0) & (original description: Putative CIB22, Description = NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9, PFAM = PF05347)' T '9' 'mitochondrial electron transport / ATP synthesis' 'niben101scf00466_122136-128320' '(at4g34700 : 179.0) LYR family of Fe/S cluster biogenesis protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: photorespiration; LOCATED IN: mitochondrial membrane, plasma membrane, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38676 : 117.0) no description available & (reliability: 358.0) & (original description: Putative CIB22, Description = NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9, PFAM = PF05347)' T '9' 'mitochondrial electron transport / ATP synthesis' 'niben101scf01025_143796-149629' '(at4g34700 : 158.0) LYR family of Fe/S cluster biogenesis protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: photorespiration; LOCATED IN: mitochondrial membrane, plasma membrane, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38676 : 106.0) no description available & (reliability: 316.0) & (original description: Putative CIB22, Description = NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9, PFAM = )' T '9' 'mitochondrial electron transport / ATP synthesis' 'niben101scf01852_517244-521893' '(at4g34700 : 164.0) LYR family of Fe/S cluster biogenesis protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: photorespiration; LOCATED IN: mitochondrial membrane, plasma membrane, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38676 : 113.0) no description available & (reliability: 328.0) & (original description: Putative CIB22, Description = NADH ubiquinone oxidoreductase B22-like subunit, PFAM = PF05347)' T '9' 'mitochondrial electron transport / ATP synthesis' 'niben101scf04664_20837-24790' '(at4g34700 : 169.0) LYR family of Fe/S cluster biogenesis protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: photorespiration; LOCATED IN: mitochondrial membrane, plasma membrane, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38676 : 117.0) no description available & (reliability: 338.0) & (original description: Putative CIB22, Description = NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9, PFAM = PF05347)' T '9.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH' '' '' '9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'nbv0.3scaffold24653_17423-19635' '(at1g14450 : 96.3) NADH dehydrogenase (ubiquinone)s; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: photorespiration; LOCATED IN: mitochondrial membrane, respiratory chain complex I; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, B12 subunit (InterPro:IPR012576); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase (ubiquinone)s (TAIR:AT2G02510.1); Has 62 Blast hits to 62 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 53; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative At1g14450, Description = NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B, PFAM = PF08122)' T '9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'nbv0.3scaffold33175_2674-4997' '(q01300|nu1m_pethy : 128.0) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1) - Petunia hybrida (Petunia) & (atmg01275 : 124.0) Encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from three precursors, NAD1A, NAD1B, and NAD1C.; NADH dehydrogenase 1A (NAD1A); INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrial respiratory chain complex I, respiratory chain complex I; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit 1 (InterPro:IPR001694), NADH:ubiquinone oxidoreductase, subunit 1, conserved site (InterPro:IPR018086); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 1C (TAIR:ATMG00516.1). & (gnl|cdd|84559 : 99.5) no description available & (gnl|cdd|39967 : 99.0) no description available & (reliability: 248.0) & (original description: Putative nad1, Description = NADH-ubiquinone oxidoreductase chain 1, PFAM = PF00146)' T '9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'nbv0.5scaffold3132_77005-246554' '(q8h9d2|nqr_soltu : 172.0) NAD(P)H:quinone oxidoreductase (EC 1.6.5.2) (NAD(P)H:QR) - Solanum tuberosum (Potato) & (at3g27890 : 131.0) Encodes NAD(P)H:quinone reductase which is an FMN binding protein that catalyzes the reduction of quinone substrates to hydroquinones.The enzyme activity was confirmed by in vitro assay.; NADPH:quinone oxidoreductase (NQR); FUNCTIONS IN: FMN reductase activity; INVOLVED IN: response to salt stress, defense response to bacterium; LOCATED IN: chloroplast stroma, chloroplast, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NADPH-dependent FMN reductase (InterPro:IPR005025); Has 4868 Blast hits to 4868 proteins in 1478 species: Archae - 69; Bacteria - 4415; Metazoa - 6; Fungi - 46; Plants - 72; Viruses - 0; Other Eukaryotes - 260 (source: NCBI BLink). & (gnl|cdd|39730 : 98.6) no description available & (gnl|cdd|86303 : 85.0) no description available & (reliability: 262.0) & (original description: Putative BnaAnng24670D, Description = BnaAnng24670D protein, PFAM = PF03358)' T '9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'nbv0.5scaffold4943_154995-160570' '(q01300|nu1m_pethy : 191.0) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1) - Petunia hybrida (Petunia) & (atmg01275 : 183.0) Encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from three precursors, NAD1A, NAD1B, and NAD1C.; NADH dehydrogenase 1A (NAD1A); INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrial respiratory chain complex I, respiratory chain complex I; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit 1 (InterPro:IPR001694), NADH:ubiquinone oxidoreductase, subunit 1, conserved site (InterPro:IPR018086); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 1C (TAIR:ATMG00516.1). & (gnl|cdd|39967 : 152.0) no description available & (gnl|cdd|84559 : 148.0) no description available & (reliability: 366.0) & (original description: Putative nad1, Description = NADH-ubiquinone oxidoreductase chain 1, PFAM = PF00146)' T '9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben044scf00009753ctg015_1-620' '(atmg00650 : 123.0) Encodes NADH dehydrogenase subunit 4L.; NADH dehydrogenase subunit 4L (NAD4L); CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/quinone oxidoreductase, chain 4L (InterPro:IPR001133). & (p26851|nu4lm_marpo : 95.9) NADH-ubiquinone oxidoreductase chain 4L (EC 1.6.5.3) (NADH dehydrogenase subunit 4L) - Marchantia polymorpha (Liverwort) & (gnl|cdd|39868 : 94.5) no description available & (reliability: 246.0) & (original description: Putative ND4L, Description = NADH-ubiquinone oxidoreductase chain 4L, PFAM = PF00420)' T '9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf00150_417909-424127' '(at3g12260 : 184.0) LYR family of Fe/S cluster biogenesis protein; FUNCTIONS IN: catalytic activity; LOCATED IN: mitochondrion, respiratory chain complex I, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 252 Blast hits to 252 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 50; Plants - 50; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|38636 : 125.0) no description available & (reliability: 368.0) & (original description: Putative At3g12260, Description = NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6, PFAM = )' T '9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf00438_257257-259556' '(atmg00650 : 111.0) Encodes NADH dehydrogenase subunit 4L.; NADH dehydrogenase subunit 4L (NAD4L); CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/quinone oxidoreductase, chain 4L (InterPro:IPR001133). & (gnl|cdd|39868 : 96.8) no description available & (p26851|nu4lm_marpo : 89.0) NADH-ubiquinone oxidoreductase chain 4L (EC 1.6.5.3) (NADH dehydrogenase subunit 4L) - Marchantia polymorpha (Liverwort) & (reliability: 222.0) & (original description: Putative ND4L, Description = NADH-ubiquinone oxidoreductase chain 4L, PFAM = PF00420)' T '9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf00571_497684-505642' '(at3g12260 : 183.0) LYR family of Fe/S cluster biogenesis protein; FUNCTIONS IN: catalytic activity; LOCATED IN: mitochondrion, respiratory chain complex I, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 252 Blast hits to 252 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 50; Plants - 50; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|38636 : 127.0) no description available & (reliability: 366.0) & (original description: Putative glysoja_007403, Description = NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6, PFAM = )' T '9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf00705_126848-128366' '(at1g14450 : 96.3) NADH dehydrogenase (ubiquinone)s; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: photorespiration; LOCATED IN: mitochondrial membrane, respiratory chain complex I; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, B12 subunit (InterPro:IPR012576); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase (ubiquinone)s (TAIR:AT2G02510.1); Has 62 Blast hits to 62 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 53; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative At1g14450, Description = NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B, PFAM = PF08122)' T '9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf00854_343496-800092' '(q01300|nu1m_pethy : 170.0) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1) - Petunia hybrida (Petunia) & (atmg01275 : 162.0) Encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from three precursors, NAD1A, NAD1B, and NAD1C.; NADH dehydrogenase 1A (NAD1A); INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrial respiratory chain complex I, respiratory chain complex I; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit 1 (InterPro:IPR001694), NADH:ubiquinone oxidoreductase, subunit 1, conserved site (InterPro:IPR018086); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 1C (TAIR:ATMG00516.1). & (gnl|cdd|39967 : 140.0) no description available & (gnl|cdd|84559 : 137.0) no description available & (reliability: 324.0) & (original description: Putative nad1, Description = NADH-ubiquinone oxidoreductase chain 1, PFAM = PF00146;PF00146)' T '9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf01102_141602-155653' '(q8h9d2|nqr_soltu : 231.0) NAD(P)H:quinone oxidoreductase (EC 1.6.5.2) (NAD(P)H:QR) - Solanum tuberosum (Potato) & (at3g27890 : 209.0) Encodes NAD(P)H:quinone reductase which is an FMN binding protein that catalyzes the reduction of quinone substrates to hydroquinones.The enzyme activity was confirmed by in vitro assay.; NADPH:quinone oxidoreductase (NQR); FUNCTIONS IN: FMN reductase activity; INVOLVED IN: response to salt stress, defense response to bacterium; LOCATED IN: chloroplast stroma, chloroplast, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NADPH-dependent FMN reductase (InterPro:IPR005025); Has 4868 Blast hits to 4868 proteins in 1478 species: Archae - 69; Bacteria - 4415; Metazoa - 6; Fungi - 46; Plants - 72; Viruses - 0; Other Eukaryotes - 260 (source: NCBI BLink). & (gnl|cdd|39730 : 141.0) no description available & (gnl|cdd|86303 : 83.1) no description available & (reliability: 418.0) & (original description: Putative NQR, Description = NADPH:quinone oxidoreductase-like protein, PFAM = PF03358)' T '9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf01102_206710-209157' '(q8h9d2|nqr_soltu : 174.0) NAD(P)H:quinone oxidoreductase (EC 1.6.5.2) (NAD(P)H:QR) - Solanum tuberosum (Potato) & (at3g27890 : 126.0) Encodes NAD(P)H:quinone reductase which is an FMN binding protein that catalyzes the reduction of quinone substrates to hydroquinones.The enzyme activity was confirmed by in vitro assay.; NADPH:quinone oxidoreductase (NQR); FUNCTIONS IN: FMN reductase activity; INVOLVED IN: response to salt stress, defense response to bacterium; LOCATED IN: chloroplast stroma, chloroplast, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NADPH-dependent FMN reductase (InterPro:IPR005025); Has 4868 Blast hits to 4868 proteins in 1478 species: Archae - 69; Bacteria - 4415; Metazoa - 6; Fungi - 46; Plants - 72; Viruses - 0; Other Eukaryotes - 260 (source: NCBI BLink). & (gnl|cdd|39730 : 94.0) no description available & (gnl|cdd|86303 : 83.1) no description available & (reliability: 252.0) & (original description: Putative BnaAnng24670D, Description = BnaAnng24670D protein, PFAM = PF03358)' T '9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf01421_66906-74346' '(at3g12260 : 181.0) LYR family of Fe/S cluster biogenesis protein; FUNCTIONS IN: catalytic activity; LOCATED IN: mitochondrion, respiratory chain complex I, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 252 Blast hits to 252 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 50; Plants - 50; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|38636 : 127.0) no description available & (reliability: 362.0) & (original description: Putative At3g12260, Description = NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6, PFAM = )' T '9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf01954_18936-22032' '(q8h9d2|nqr_soltu : 295.0) NAD(P)H:quinone oxidoreductase (EC 1.6.5.2) (NAD(P)H:QR) - Solanum tuberosum (Potato) & (at3g27890 : 262.0) Encodes NAD(P)H:quinone reductase which is an FMN binding protein that catalyzes the reduction of quinone substrates to hydroquinones.The enzyme activity was confirmed by in vitro assay.; NADPH:quinone oxidoreductase (NQR); FUNCTIONS IN: FMN reductase activity; INVOLVED IN: response to salt stress, defense response to bacterium; LOCATED IN: chloroplast stroma, chloroplast, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NADPH-dependent FMN reductase (InterPro:IPR005025); Has 4868 Blast hits to 4868 proteins in 1478 species: Archae - 69; Bacteria - 4415; Metazoa - 6; Fungi - 46; Plants - 72; Viruses - 0; Other Eukaryotes - 260 (source: NCBI BLink). & (gnl|cdd|39730 : 192.0) no description available & (gnl|cdd|86303 : 133.0) no description available & (reliability: 524.0) & (original description: Putative chrR, Description = NADPH-dependent FMN reductase, PFAM = PF03358)' T '9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf01954_86832-91433' '(q8h9d2|nqr_soltu : 303.0) NAD(P)H:quinone oxidoreductase (EC 1.6.5.2) (NAD(P)H:QR) - Solanum tuberosum (Potato) & (at3g27890 : 270.0) Encodes NAD(P)H:quinone reductase which is an FMN binding protein that catalyzes the reduction of quinone substrates to hydroquinones.The enzyme activity was confirmed by in vitro assay.; NADPH:quinone oxidoreductase (NQR); FUNCTIONS IN: FMN reductase activity; INVOLVED IN: response to salt stress, defense response to bacterium; LOCATED IN: chloroplast stroma, chloroplast, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NADPH-dependent FMN reductase (InterPro:IPR005025); Has 4868 Blast hits to 4868 proteins in 1478 species: Archae - 69; Bacteria - 4415; Metazoa - 6; Fungi - 46; Plants - 72; Viruses - 0; Other Eukaryotes - 260 (source: NCBI BLink). & (gnl|cdd|39730 : 212.0) no description available & (gnl|cdd|86303 : 142.0) no description available & (reliability: 540.0) & (original description: Putative azr, Description = NADPH-dependent FMN reductase, PFAM = PF03358)' T '9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf02438_250926-261695' '(gnl|cdd|38300 : 473.0) no description available & (at4g28510 : 420.0) prohibitin 1 (Atphb1); prohibitin 1 (PHB1); INVOLVED IN: response to stress; LOCATED IN: mitochondrion, plasma membrane, respiratory chain complex I; EXPRESSED IN: 10 plant structures; CONTAINS InterPro DOMAIN/s: Prohibitin (InterPro:IPR000163), Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: prohibitin 6 (TAIR:AT2G20530.2); Has 4079 Blast hits to 4077 proteins in 1204 species: Archae - 185; Bacteria - 2047; Metazoa - 512; Fungi - 318; Plants - 262; Viruses - 12; Other Eukaryotes - 743 (source: NCBI BLink). & (gnl|cdd|48213 : 308.0) no description available & (reliability: 840.0) & (original description: Putative PHB2, Description = Prohibitin-2, mitochondrial, PFAM = PF01145)' T '9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf04114_63184-68780' '(q01300|nu1m_pethy : 141.0) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1) - Petunia hybrida (Petunia) & (atmg01275 : 134.0) Encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from three precursors, NAD1A, NAD1B, and NAD1C.; NADH dehydrogenase 1A (NAD1A); INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrial respiratory chain complex I, respiratory chain complex I; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit 1 (InterPro:IPR001694), NADH:ubiquinone oxidoreductase, subunit 1, conserved site (InterPro:IPR018086); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 1C (TAIR:ATMG00516.1). & (gnl|cdd|39967 : 107.0) no description available & (gnl|cdd|84559 : 107.0) no description available & (reliability: 268.0) & (original description: Putative nad1, Description = NADH-ubiquinone oxidoreductase chain 1, PFAM = PF00146)' T '9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf04775_68798-73917' '(gnl|cdd|38300 : 474.0) no description available & (at4g28510 : 420.0) prohibitin 1 (Atphb1); prohibitin 1 (PHB1); INVOLVED IN: response to stress; LOCATED IN: mitochondrion, plasma membrane, respiratory chain complex I; EXPRESSED IN: 10 plant structures; CONTAINS InterPro DOMAIN/s: Prohibitin (InterPro:IPR000163), Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: prohibitin 6 (TAIR:AT2G20530.2); Has 4079 Blast hits to 4077 proteins in 1204 species: Archae - 185; Bacteria - 2047; Metazoa - 512; Fungi - 318; Plants - 262; Viruses - 12; Other Eukaryotes - 743 (source: NCBI BLink). & (gnl|cdd|48213 : 313.0) no description available & (reliability: 840.0) & (original description: Putative PHB2, Description = Prohibitin-2, mitochondrial, PFAM = PF01145)' T '9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf11424_22436-26799' '(gnl|cdd|38300 : 464.0) no description available & (at4g28510 : 416.0) prohibitin 1 (Atphb1); prohibitin 1 (PHB1); INVOLVED IN: response to stress; LOCATED IN: mitochondrion, plasma membrane, respiratory chain complex I; EXPRESSED IN: 10 plant structures; CONTAINS InterPro DOMAIN/s: Prohibitin (InterPro:IPR000163), Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: prohibitin 6 (TAIR:AT2G20530.2); Has 4079 Blast hits to 4077 proteins in 1204 species: Archae - 185; Bacteria - 2047; Metazoa - 512; Fungi - 318; Plants - 262; Viruses - 12; Other Eukaryotes - 743 (source: NCBI BLink). & (gnl|cdd|48213 : 312.0) no description available & (reliability: 832.0) & (original description: Putative PHB2, Description = Prohibitin-2, mitochondrial, PFAM = PF01145)' T '9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'niben101scf30554_7028-12641' '(q01300|nu1m_pethy : 192.0) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1) - Petunia hybrida (Petunia) & (atmg01275 : 184.0) Encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from three precursors, NAD1A, NAD1B, and NAD1C.; NADH dehydrogenase 1A (NAD1A); INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrial respiratory chain complex I, respiratory chain complex I; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit 1 (InterPro:IPR001694), NADH:ubiquinone oxidoreductase, subunit 1, conserved site (InterPro:IPR018086); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 1C (TAIR:ATMG00516.1). & (gnl|cdd|39967 : 153.0) no description available & (gnl|cdd|84559 : 149.0) no description available & (reliability: 368.0) & (original description: Putative orf108c, Description = NADH-ubiquinone oxidoreductase chain 1, PFAM = PF00146)' T '9.1.1.5' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I.carbonic anhydrase' 'nbv0.3scaffold38867_13073-19637' '(at3g48680 : 384.0) Encodes a mitochondrial gamma carbonic anhydrase-like protein. Component of the NADH dehydrogenase complex.; gamma carbonic anhydrase-like 2 (GAMMA CAL2); FUNCTIONS IN: transferase activity; INVOLVED IN: photorespiration; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase like 1 (TAIR:AT5G63510.1); Has 6263 Blast hits to 6236 proteins in 1756 species: Archae - 151; Bacteria - 4130; Metazoa - 15; Fungi - 10; Plants - 165; Viruses - 0; Other Eukaryotes - 1792 (source: NCBI BLink). & (gnl|cdd|31007 : 146.0) no description available & (reliability: 768.0) & (original description: Putative GAMMACAL2, Description = Gamma carbonic anhydrase-like 2, mitochondrial, PFAM = )' T '9.1.1.5' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I.carbonic anhydrase' 'nbv0.3scaffold43227_5120-7530' '(at5g63510 : 181.0) Encodes a mitochondrial gamma carbonic anhydrase-like protein. Component of the NADH dehydrogenase complex.; gamma carbonic anhydrase like 1 (GAMMA CAL1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase-like 2 (TAIR:AT3G48680.1). & (reliability: 362.0) & (original description: Putative At3g48680, Description = AtCAL1, PFAM = )' T '9.1.1.5' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I.carbonic anhydrase' 'nbv0.3scaffold71631_703-6956' '(at1g47260 : 337.0) Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.; gamma carbonic anhydrase 2 (GAMMA CA2); FUNCTIONS IN: carbonate dehydratase activity; INVOLVED IN: response to salt stress, regulation of oxygen and reactive oxygen species metabolic process, anther dehiscence, photorespiration; LOCATED IN: in 6 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 1 (TAIR:AT1G19580.1); Has 12062 Blast hits to 12006 proteins in 2273 species: Archae - 302; Bacteria - 8576; Metazoa - 53; Fungi - 108; Plants - 233; Viruses - 0; Other Eukaryotes - 2790 (source: NCBI BLink). & (gnl|cdd|31007 : 151.0) no description available & (reliability: 674.0) & (original description: Putative dapH, Description = Hexapeptide transferase family protein, PFAM = PF00132)' T '9.1.1.5' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I.carbonic anhydrase' 'nbv0.5scaffold268_587196-594343' '(at1g19580 : 442.0) Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.; gamma carbonic anhydrase 1 (GAMMA CA1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 3 (TAIR:AT5G66510.1). & (gnl|cdd|31007 : 198.0) no description available & (reliability: 884.0) & (original description: Putative dapH, Description = Hexapeptide transferase family protein, PFAM = PF00132;PF00132)' T '9.1.1.5' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I.carbonic anhydrase' 'nbv0.5scaffold3042_273325-283368' '(at1g19580 : 457.0) Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.; gamma carbonic anhydrase 1 (GAMMA CA1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 3 (TAIR:AT5G66510.1). & (gnl|cdd|31007 : 204.0) no description available & (reliability: 914.0) & (original description: Putative dapH, Description = Hexapeptide transferase family protein, PFAM = PF00132)' T '9.1.1.5' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I.carbonic anhydrase' 'niben044scf00023219ctg000_1075-9943' '(at1g19580 : 457.0) Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.; gamma carbonic anhydrase 1 (GAMMA CA1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 3 (TAIR:AT5G66510.1). & (gnl|cdd|31007 : 204.0) no description available & (reliability: 914.0) & (original description: Putative dapH, Description = Hexapeptide transferase family protein, PFAM = PF00132;PF00132)' T '9.1.1.5' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I.carbonic anhydrase' 'niben101scf00338_613496-620823' '(at3g48680 : 386.0) Encodes a mitochondrial gamma carbonic anhydrase-like protein. Component of the NADH dehydrogenase complex.; gamma carbonic anhydrase-like 2 (GAMMA CAL2); FUNCTIONS IN: transferase activity; INVOLVED IN: photorespiration; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase like 1 (TAIR:AT5G63510.1); Has 6263 Blast hits to 6236 proteins in 1756 species: Archae - 151; Bacteria - 4130; Metazoa - 15; Fungi - 10; Plants - 165; Viruses - 0; Other Eukaryotes - 1792 (source: NCBI BLink). & (gnl|cdd|31007 : 143.0) no description available & (reliability: 772.0) & (original description: Putative GAMMACAL2, Description = Gamma carbonic anhydrase-like 2, mitochondrial, PFAM = )' T '9.1.1.5' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I.carbonic anhydrase' 'niben101scf00606_244733-255826' '(at1g19580 : 422.0) Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.; gamma carbonic anhydrase 1 (GAMMA CA1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 3 (TAIR:AT5G66510.1). & (gnl|cdd|31007 : 174.0) no description available & (reliability: 844.0) & (original description: Putative dapH, Description = Hexapeptide transferase family protein, PFAM = PF00132)' T '9.1.1.5' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I.carbonic anhydrase' 'niben101scf04113_588555-595930' '(at1g19580 : 444.0) Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.; gamma carbonic anhydrase 1 (GAMMA CA1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 3 (TAIR:AT5G66510.1). & (gnl|cdd|31007 : 196.0) no description available & (reliability: 888.0) & (original description: Putative dapH, Description = Hexapeptide transferase family protein, PFAM = PF00132;PF00132)' T '9.1.1.5' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I.carbonic anhydrase' 'niben101scf08194_272320-281497' '(at1g19580 : 456.0) Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.; gamma carbonic anhydrase 1 (GAMMA CA1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 3 (TAIR:AT5G66510.1). & (gnl|cdd|31007 : 203.0) no description available & (reliability: 912.0) & (original description: Putative dapH, Description = Hexapeptide transferase family protein, PFAM = PF00132)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'nbv0.3scaffold9577_1-7692' '(at3g03070 : 159.0) NADH-ubiquinone oxidoreductase-related; CONTAINS InterPro DOMAIN/s: Zinc finger, CHCC-type (InterPro:IPR019401), NADH dehydrogenase [ubiquinone] (complex I), iron-sulphur protein 6, mitochondria (InterPro:IPR016668); Has 288 Blast hits to 288 proteins in 139 species: Archae - 0; Bacteria - 2; Metazoa - 142; Fungi - 84; Plants - 40; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|38666 : 123.0) no description available & (reliability: 318.0) & (original description: Putative nuoS6, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial, PFAM = PF10276)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'nbv0.3scaffold19212_33178-34603' '(q43644|ndus1_soltu : 277.0) NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75kD) (CI-75kD) (76 kDa mitochondrial complex I subunit) - Solanum tuberosum (Potato) & (at5g37510 : 215.0) Encodes a subunit of the 400 kDa subcomplex of the mitochondrial NADH dehydrogenase (complex I). The protein has been isolated in the male gametophyte.; embryo defective 1467 (EMB1467); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to oxidative stress, photorespiration, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, mitochondrial membrane, chloroplast, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding (InterPro:IPR019574), NADH:ubiquinone oxidoreductase, subunit G (InterPro:IPR010228), Molybdopterin oxidoreductase (InterPro:IPR006656), Ferredoxin (InterPro:IPR001041), NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site (InterPro:IPR000283), NADH-quinone oxidoreductase, chain G, C-terminal (InterPro:IPR015405); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37493 : 194.0) no description available & (gnl|cdd|82828 : 164.0) no description available & (reliability: 430.0) & (original description: Putative nqo, Description = NADH-quinone oxidoreductase, PFAM = PF00384;PF09326)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'nbv0.3scaffold33175_2674-4997' '(q01300|nu1m_pethy : 128.0) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1) - Petunia hybrida (Petunia) & (atmg01275 : 124.0) Encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from three precursors, NAD1A, NAD1B, and NAD1C.; NADH dehydrogenase 1A (NAD1A); INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrial respiratory chain complex I, respiratory chain complex I; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit 1 (InterPro:IPR001694), NADH:ubiquinone oxidoreductase, subunit 1, conserved site (InterPro:IPR018086); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 1C (TAIR:ATMG00516.1). & (gnl|cdd|84559 : 99.5) no description available & (gnl|cdd|39967 : 99.0) no description available & (reliability: 248.0) & (original description: Putative nad1, Description = NADH-ubiquinone oxidoreductase chain 1, PFAM = PF00146)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'nbv0.3scaffold42522_4921-8538' '(atmg01320 : 246.0) encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from two precursors, NAD2A and NAD2B.; NADH dehydrogenase 2B (NAD2B); CONTAINS InterPro DOMAIN/s: NADH-quinone oxidoreductase, chain N (InterPro:IPR010096), NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 2A (TAIR:ATMG00285.1). & (p93401|nu2m_oenbe : 222.0) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH dehydrogenase subunit 2) - Oenothera bertiana (Bertero's evening primrose) & (gnl|cdd|81741 : 85.2) no description available & (reliability: 492.0) & (original description: Putative nad2, Description = NADH dehydrogenase subunit 2, PFAM = PF00361)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'nbv0.3scaffold53244_12599-14035' '(q36450|ndus2_nicsy : 167.0) NADH-ubiquinone oxidoreductase 49 kDa subunit (EC 1.6.5.3) (EC 1.6.99.3) (NADH dehydrogenase subunit 7) - Nicotiana sylvestris (Wood tobacco) & (atmg00510 : 160.0) NADH dehydrogenase subunit 7; NADH dehydrogenase subunit 7 (NAD7); FUNCTIONS IN: NADH dehydrogenase activity; INVOLVED IN: oxidation reduction, cellular respiration; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex I, respiratory chain complex I, membrane; EXPRESSED IN: leaf whorl, guard cell, cultured cell, seed, leaf; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: NADH dehydrogenase I, D subunit (InterPro:IPR010219), NADH-quinone oxidoreductase, subunit D (InterPro:IPR001135), NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site (InterPro:IPR014029); BEST Arabidopsis thaliana protein match is: NAD(P)H dehydrogenase subunit H (TAIR:ATCG01110.1). & (gnl|cdd|38081 : 143.0) no description available & (gnl|cdd|81837 : 126.0) no description available & (reliability: 320.0) & (original description: Putative nad7, Description = NADH dehydrogenase subunit 7, PFAM = PF00346)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'nbv0.3scaffold70790_2765-5274' '(atmg00580 : 181.0) NADH dehydrogenase subunit 4; NADH dehydrogenase subunit 4 (NAD4); CONTAINS InterPro DOMAIN/s: NADH-quinone oxidoreductase, chain M (InterPro:IPR010227), NADH:ubiquinone oxidoreductase, chain 4 (InterPro:IPR003918), NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH-Ubiquinone/plastoquinone (complex I) protein (TAIR:ATCG01050.1). & (q04050|nu4m_bracm : 180.0) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4) - Brassica campestris (Field mustard) & (gnl|cdd|40042 : 165.0) no description available & (gnl|cdd|81762 : 159.0) no description available & (reliability: 362.0) & (original description: Putative nad4, Description = NADH-ubiquinone oxidoreductase chain 4, PFAM = PF00361)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'nbv0.3scaffold87752_770-5798' '(q43844|ndus7_soltu : 313.0) NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) - Solanum tuberosum (Potato) & (gnl|cdd|36900 : 302.0) no description available & (at5g11770 : 283.0) NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity, zinc ion binding; INVOLVED IN: oxidation reduction, mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrion, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase-like, 20kDa subunit (InterPro:IPR006137), [NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB (InterPro:IPR014406), NADH:ubiquinone oxidoreductase, 20kDa subunit (InterPro:IPR006138); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein G (TAIR:ATCG00430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81942 : 282.0) no description available & (reliability: 566.0) & (original description: Putative nuoB, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial, PFAM = PF01058)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'nbv0.5scaffold690_42270-184700' '(q36450|ndus2_nicsy : 177.0) NADH-ubiquinone oxidoreductase 49 kDa subunit (EC 1.6.5.3) (EC 1.6.99.3) (NADH dehydrogenase subunit 7) - Nicotiana sylvestris (Wood tobacco) & (atmg00510 : 171.0) NADH dehydrogenase subunit 7; NADH dehydrogenase subunit 7 (NAD7); FUNCTIONS IN: NADH dehydrogenase activity; INVOLVED IN: oxidation reduction, cellular respiration; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex I, respiratory chain complex I, membrane; EXPRESSED IN: leaf whorl, guard cell, cultured cell, seed, leaf; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: NADH dehydrogenase I, D subunit (InterPro:IPR010219), NADH-quinone oxidoreductase, subunit D (InterPro:IPR001135), NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site (InterPro:IPR014029); BEST Arabidopsis thaliana protein match is: NAD(P)H dehydrogenase subunit H (TAIR:ATCG01110.1). & (gnl|cdd|38081 : 152.0) no description available & (gnl|cdd|81837 : 137.0) no description available & (reliability: 342.0) & (original description: Putative orfI, Description = OrfI protein, PFAM = PF00346)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'nbv0.5scaffold825_76577-82801' '(at5g67590 : 135.0) Mutant leaves have a reduced capacity for cold acclimation, appear water-soaked, leak electrolytes, and accumulate reactive oxygen species constitutively. Encode a protein with high similarity to the 18-kD Fe-S subunit of complex I (NADH dehydrogenase, EC 1.6.5.3) in the mitochondrial electron transfer chain.; FROSTBITE1 (FRO1); CONTAINS InterPro DOMAIN/s: ETC complex I subunit conserved region (InterPro:IPR006885); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38599 : 133.0) no description available & (gnl|cdd|68375 : 101.0) no description available & (reliability: 270.0) & (original description: Putative FRO1, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, PFAM = PF04800)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'nbv0.5scaffold1549_389618-396934' '(at3g03100 : 263.0) NADH:ubiquinone oxidoreductase, 17.2kDa subunit; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 17.2kDa subunit (InterPro:IPR007763); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38592 : 169.0) no description available & (gnl|cdd|68638 : 138.0) no description available & (reliability: 526.0) & (original description: Putative At3g03100, Description = Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12, PFAM = PF05071)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'nbv0.5scaffold2763_420777-426061' '(at2g02050 : 142.0) NADH-ubiquinone oxidoreductase B18 subunit, putative; FUNCTIONS IN: NADH dehydrogenase activity, NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: mitochondrial electron transport, NADH to ubiquinone, photorespiration; LOCATED IN: mitochondrion, mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, B18 subunit (InterPro:IPR008698); Has 270 Blast hits to 270 proteins in 128 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi - 75; Plants - 50; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|38678 : 107.0) no description available & (reliability: 284.0) & (original description: Putative At2g02050, Description = NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, PFAM = PF05676)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'nbv0.5scaffold3423_65911-69576' '(at5g08530 : 871.0) 51 kDa subunit of complex I (CI51); FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, NAD or NADH binding, FMN binding, NADH dehydrogenase (ubiquinone) activity, oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: oxidation reduction, mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site (InterPro:IPR001949), NADH:ubiquinone oxidoreductase, 51kDa subunit (InterPro:IPR011538), NADH ubiquinone oxidoreductase, F subunit (InterPro:IPR011537), Soluble ligand binding domain (InterPro:IPR019554), NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding (InterPro:IPR019575); Has 8894 Blast hits to 8884 proteins in 1703 species: Archae - 49; Bacteria - 4484; Metazoa - 213; Fungi - 125; Plants - 97; Viruses - 0; Other Eukaryotes - 3926 (source: NCBI BLink). & (gnl|cdd|37869 : 812.0) no description available & (gnl|cdd|32078 : 635.0) no description available & (reliability: 1742.0) & (original description: Putative frr, Description = NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial, PFAM = PF01512;PF10589;PF10531)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'nbv0.5scaffold4943_154995-160570' '(q01300|nu1m_pethy : 191.0) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1) - Petunia hybrida (Petunia) & (atmg01275 : 183.0) Encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from three precursors, NAD1A, NAD1B, and NAD1C.; NADH dehydrogenase 1A (NAD1A); INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrial respiratory chain complex I, respiratory chain complex I; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit 1 (InterPro:IPR001694), NADH:ubiquinone oxidoreductase, subunit 1, conserved site (InterPro:IPR018086); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 1C (TAIR:ATMG00516.1). & (gnl|cdd|39967 : 152.0) no description available & (gnl|cdd|84559 : 148.0) no description available & (reliability: 366.0) & (original description: Putative nad1, Description = NADH-ubiquinone oxidoreductase chain 1, PFAM = PF00146)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben044scf00000321ctg014_1-2235' '(atmg00665 : 318.0) Mitochondrial NADH dehydrogenase subunit 5. The gene is trans-spliced from three different pre-cursors, NAD5a, NAD5b and NAD5c.; NADH dehydrogenase 5B (NAD5B); CONTAINS InterPro DOMAIN/s: NADH-plastoquinone oxidoreductase, chain 5 (InterPro:IPR003945), NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal (InterPro:IPR001516), NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 5A (TAIR:ATMG00513.1). & (p10330|nu5m_oenbe : 310.0) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5) - Oenothera bertiana (Bertero's evening primrose) & (reliability: 636.0) & (original description: Putative nad5, Description = NADH dehydrogenase subunit 5, PFAM = PF06455)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben044scf00001006ctg017_4645-5319' '(p27062|nu3m_pangi : 170.0) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH dehydrogenase subunit 3) - Panax ginseng (Korean ginseng) & (atmg00990 : 145.0) NADH dehydrogenase subunit 3; NADH dehydrogenase 3 (NAD3); CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 (InterPro:IPR000440); BEST Arabidopsis thaliana protein match is: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein (TAIR:AT2G07751.1). & (gnl|cdd|81991 : 116.0) no description available & (gnl|cdd|39861 : 105.0) no description available & (reliability: 290.0) & (original description: Putative ND3, Description = NADH-ubiquinone oxidoreductase chain 3, PFAM = PF00507)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben044scf00001941ctg015_2748-13716' '(o24143|ndus8_tobac : 387.0) NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 23 kDa subunit) (Complex I-23kD) (CI-23kD) (Complex I-28.5kD) (CI-28.5kD) - Nicotiana tabacum (Co & (at1g79010 : 350.0) Alpha-helical ferredoxin; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity, metal ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: 4Fe-4S binding domain (InterPro:IPR001450), NADH-quinone oxidoreductase, chain I (InterPro:IPR010226), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), Alpha-helical ferredoxin (InterPro:IPR009051); BEST Arabidopsis thaliana protein match is: Alpha-helical ferredoxin (TAIR:AT1G16700.1); Has 11535 Blast hits to 10912 proteins in 2421 species: Archae - 1438; Bacteria - 6995; Metazoa - 154; Fungi - 106; Plants - 790; Viruses - 1; Other Eukaryotes - 2051 (source: NCBI BLink). & (gnl|cdd|38466 : 302.0) no description available & (gnl|cdd|81787 : 235.0) no description available & (reliability: 700.0) & (original description: Putative dxr, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial, PFAM = PF12838)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben044scf00002904ctg000_1-2295' '(at2g07689 : 362.0) NADH-Ubiquinone/plastoquinone (complex I) protein; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: oxidation reduction, mitochondrial electron transport, NADH to ubiquinone, ATP synthesis coupled electron transport; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 2B (TAIR:ATMG01320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93401|nu2m_oenbe : 318.0) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH dehydrogenase subunit 2) - Oenothera bertiana (Bertero's evening primrose) & (gnl|cdd|81741 : 174.0) no description available & (gnl|cdd|39867 : 130.0) no description available & (reliability: 724.0) & (original description: Putative nad2, Description = NADH dehydrogenase subunit 2, PFAM = PF00361)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben044scf00004547ctg004_4064-6695' '(q43644|ndus1_soltu : 276.0) NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75kD) (CI-75kD) (76 kDa mitochondrial complex I subunit) - Solanum tuberosum (Potato) & (at5g37510 : 228.0) Encodes a subunit of the 400 kDa subcomplex of the mitochondrial NADH dehydrogenase (complex I). The protein has been isolated in the male gametophyte.; embryo defective 1467 (EMB1467); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to oxidative stress, photorespiration, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, mitochondrial membrane, chloroplast, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding (InterPro:IPR019574), NADH:ubiquinone oxidoreductase, subunit G (InterPro:IPR010228), Molybdopterin oxidoreductase (InterPro:IPR006656), Ferredoxin (InterPro:IPR001041), NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site (InterPro:IPR000283), NADH-quinone oxidoreductase, chain G, C-terminal (InterPro:IPR015405); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29469 : 209.0) no description available & (gnl|cdd|37493 : 208.0) no description available & (reliability: 456.0) & (original description: Putative nqo3, Description = NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial, PFAM = PF00384)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben044scf00009094ctg004_3477-5791' '(at2g02050 : 122.0) NADH-ubiquinone oxidoreductase B18 subunit, putative; FUNCTIONS IN: NADH dehydrogenase activity, NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: mitochondrial electron transport, NADH to ubiquinone, photorespiration; LOCATED IN: mitochondrion, mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, B18 subunit (InterPro:IPR008698); Has 270 Blast hits to 270 proteins in 128 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi - 75; Plants - 50; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|38678 : 100.0) no description available & (reliability: 244.0) & (original description: Putative At2g02050, Description = NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, PFAM = PF05676)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben044scf00012899ctg000_29288-32327' '(atmg00580 : 236.0) NADH dehydrogenase subunit 4; NADH dehydrogenase subunit 4 (NAD4); CONTAINS InterPro DOMAIN/s: NADH-quinone oxidoreductase, chain M (InterPro:IPR010227), NADH:ubiquinone oxidoreductase, chain 4 (InterPro:IPR003918), NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH-Ubiquinone/plastoquinone (complex I) protein (TAIR:ATCG01050.1). & (q04050|nu4m_bracm : 233.0) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4) - Brassica campestris (Field mustard) & (gnl|cdd|40042 : 152.0) no description available & (gnl|cdd|81762 : 141.0) no description available & (reliability: 472.0) & (original description: Putative nad4, Description = NADH dehydrogenase subunit 4, PFAM = PF00361)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben044scf00017037ctg003_2212-4658' '(q04050|nu4m_bracm : 257.0) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4) - Brassica campestris (Field mustard) & (atmg00580 : 254.0) NADH dehydrogenase subunit 4; NADH dehydrogenase subunit 4 (NAD4); CONTAINS InterPro DOMAIN/s: NADH-quinone oxidoreductase, chain M (InterPro:IPR010227), NADH:ubiquinone oxidoreductase, chain 4 (InterPro:IPR003918), NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH-Ubiquinone/plastoquinone (complex I) protein (TAIR:ATCG01050.1). & (gnl|cdd|81762 : 125.0) no description available & (gnl|cdd|40042 : 113.0) no description available & (reliability: 508.0) & (original description: Putative nad4, Description = NADH dehydrogenase subunit 4, PFAM = PF01059)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben044scf00020503ctg006_922-3481' '(atmg00070 : 287.0) NADH dehydrogenase subunit 9; NADH dehydrogenase subunit 9 (NAD9); CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 30kDa subunit (InterPro:IPR001268), NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site (InterPro:IPR020396). & (p80261|ndus3_soltu : 278.0) NADH-ubiquinone oxidoreductase 27 kDa subunit (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-27kD) (CI-27kD) (NADH dehydrogenase subunit 9) - Solanum tuberosum (Potato) & (gnl|cdd|36925 : 218.0) no description available & (gnl|cdd|81836 : 138.0) no description available & (reliability: 574.0) & (original description: Putative nad9, Description = NADH dehydrogenase subunit 9, PFAM = PF00329)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben044scf00020657ctg004_1-6475' '(at4g26965 : 110.0) NADH:ubiquinone oxidoreductase, 17.2kDa subunit; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 17.2kDa subunit (InterPro:IPR007763); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative BnaAnng22240D, Description = BnaAnng22240D protein, PFAM = PF05071)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben044scf00023723ctg009_11814-17961' '(at5g67590 : 152.0) Mutant leaves have a reduced capacity for cold acclimation, appear water-soaked, leak electrolytes, and accumulate reactive oxygen species constitutively. Encode a protein with high similarity to the 18-kD Fe-S subunit of complex I (NADH dehydrogenase, EC 1.6.5.3) in the mitochondrial electron transfer chain.; FROSTBITE1 (FRO1); CONTAINS InterPro DOMAIN/s: ETC complex I subunit conserved region (InterPro:IPR006885); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38599 : 142.0) no description available & (gnl|cdd|68375 : 109.0) no description available & (reliability: 304.0) & (original description: Putative FRO1, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, PFAM = PF04800)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf00091_99687-106554' '(p80269|ndus8_soltu : 377.0) NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 23 kDa subunit) (Complex I-23kD) (CI-23kD) (Complex I-28.5kD) (CI-28.5kD) - Solanum tuberosum (Po & (at1g79010 : 346.0) Alpha-helical ferredoxin; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity, metal ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: 4Fe-4S binding domain (InterPro:IPR001450), NADH-quinone oxidoreductase, chain I (InterPro:IPR010226), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), Alpha-helical ferredoxin (InterPro:IPR009051); BEST Arabidopsis thaliana protein match is: Alpha-helical ferredoxin (TAIR:AT1G16700.1); Has 11535 Blast hits to 10912 proteins in 2421 species: Archae - 1438; Bacteria - 6995; Metazoa - 154; Fungi - 106; Plants - 790; Viruses - 1; Other Eukaryotes - 2051 (source: NCBI BLink). & (gnl|cdd|38466 : 303.0) no description available & (gnl|cdd|81787 : 239.0) no description available & (reliability: 692.0) & (original description: Putative dxr, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial, PFAM = PF12838)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf00149_217525-220094' '(atmg00070 : 369.0) NADH dehydrogenase subunit 9; NADH dehydrogenase subunit 9 (NAD9); CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 30kDa subunit (InterPro:IPR001268), NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site (InterPro:IPR020396). & (p80261|ndus3_soltu : 361.0) NADH-ubiquinone oxidoreductase 27 kDa subunit (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-27kD) (CI-27kD) (NADH dehydrogenase subunit 9) - Solanum tuberosum (Potato) & (gnl|cdd|36925 : 287.0) no description available & (gnl|cdd|81836 : 169.0) no description available & (reliability: 738.0) & (original description: Putative NAD9, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, PFAM = PF00329)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf00236_87943-95912' '(q43844|ndus7_soltu : 343.0) NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) - Solanum tuberosum (Potato) & (gnl|cdd|36900 : 303.0) no description available & (at5g11770 : 283.0) NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity, zinc ion binding; INVOLVED IN: oxidation reduction, mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrion, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase-like, 20kDa subunit (InterPro:IPR006137), [NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB (InterPro:IPR014406), NADH:ubiquinone oxidoreductase, 20kDa subunit (InterPro:IPR006138); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein G (TAIR:ATCG00430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81942 : 281.0) no description available & (reliability: 566.0) & (original description: Putative nuoB, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial, PFAM = PF01058)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf00258_182379-191420' '(q43644|ndus1_soltu : 1331.0) NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75kD) (CI-75kD) (76 kDa mitochondrial complex I subunit) - Solanum tuberosum (Potato) & (at5g37510 : 1143.0) Encodes a subunit of the 400 kDa subcomplex of the mitochondrial NADH dehydrogenase (complex I). The protein has been isolated in the male gametophyte.; embryo defective 1467 (EMB1467); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to oxidative stress, photorespiration, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, mitochondrial membrane, chloroplast, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding (InterPro:IPR019574), NADH:ubiquinone oxidoreductase, subunit G (InterPro:IPR010228), Molybdopterin oxidoreductase (InterPro:IPR006656), Ferredoxin (InterPro:IPR001041), NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site (InterPro:IPR000283), NADH-quinone oxidoreductase, chain G, C-terminal (InterPro:IPR015405); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37493 : 1070.0) no description available & (gnl|cdd|82828 : 961.0) no description available & (reliability: 2286.0) & (original description: Putative nqo3, Description = NADH-quinone oxidoreductase, PFAM = PF13510;PF10588;PF09326;PF00384)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf00258_185929-189158' '(q43644|ndus1_soltu : 279.0) NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75kD) (CI-75kD) (76 kDa mitochondrial complex I subunit) - Solanum tuberosum (Potato) & (at5g37510 : 229.0) Encodes a subunit of the 400 kDa subcomplex of the mitochondrial NADH dehydrogenase (complex I). The protein has been isolated in the male gametophyte.; embryo defective 1467 (EMB1467); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to oxidative stress, photorespiration, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, mitochondrial membrane, chloroplast, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding (InterPro:IPR019574), NADH:ubiquinone oxidoreductase, subunit G (InterPro:IPR010228), Molybdopterin oxidoreductase (InterPro:IPR006656), Ferredoxin (InterPro:IPR001041), NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site (InterPro:IPR000283), NADH-quinone oxidoreductase, chain G, C-terminal (InterPro:IPR015405); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37493 : 210.0) no description available & (gnl|cdd|29469 : 210.0) no description available & (reliability: 458.0) & (original description: Putative nqo3, Description = NADH-quinone oxidoreductase, PFAM = PF00384)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf00542_476410-482235' '(q43644|ndus1_soltu : 384.0) NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75kD) (CI-75kD) (76 kDa mitochondrial complex I subunit) - Solanum tuberosum (Potato) & (at5g37510 : 374.0) Encodes a subunit of the 400 kDa subcomplex of the mitochondrial NADH dehydrogenase (complex I). The protein has been isolated in the male gametophyte.; embryo defective 1467 (EMB1467); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to oxidative stress, photorespiration, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, mitochondrial membrane, chloroplast, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding (InterPro:IPR019574), NADH:ubiquinone oxidoreductase, subunit G (InterPro:IPR010228), Molybdopterin oxidoreductase (InterPro:IPR006656), Ferredoxin (InterPro:IPR001041), NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site (InterPro:IPR000283), NADH-quinone oxidoreductase, chain G, C-terminal (InterPro:IPR015405); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37493 : 367.0) no description available & (gnl|cdd|82828 : 367.0) no description available & (reliability: 748.0) & (original description: Putative nqo3, Description = NADH-quinone oxidoreductase, PFAM = PF10588)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf00849_203598-206521' '(atmg00580 : 251.0) NADH dehydrogenase subunit 4; NADH dehydrogenase subunit 4 (NAD4); CONTAINS InterPro DOMAIN/s: NADH-quinone oxidoreductase, chain M (InterPro:IPR010227), NADH:ubiquinone oxidoreductase, chain 4 (InterPro:IPR003918), NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH-Ubiquinone/plastoquinone (complex I) protein (TAIR:ATCG01050.1). & (q04050|nu4m_bracm : 248.0) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4) - Brassica campestris (Field mustard) & (gnl|cdd|40042 : 166.0) no description available & (gnl|cdd|81762 : 157.0) no description available & (reliability: 502.0) & (original description: Putative nad4, Description = NADH dehydrogenase subunit 4, PFAM = PF00361)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf00854_343496-800092' '(q01300|nu1m_pethy : 170.0) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1) - Petunia hybrida (Petunia) & (atmg01275 : 162.0) Encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from three precursors, NAD1A, NAD1B, and NAD1C.; NADH dehydrogenase 1A (NAD1A); INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrial respiratory chain complex I, respiratory chain complex I; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit 1 (InterPro:IPR001694), NADH:ubiquinone oxidoreductase, subunit 1, conserved site (InterPro:IPR018086); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 1C (TAIR:ATMG00516.1). & (gnl|cdd|39967 : 140.0) no description available & (gnl|cdd|84559 : 137.0) no description available & (reliability: 324.0) & (original description: Putative nad1, Description = NADH-ubiquinone oxidoreductase chain 1, PFAM = PF00146;PF00146)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf01063_550006-554463' '(at3g03070 : 164.0) NADH-ubiquinone oxidoreductase-related; CONTAINS InterPro DOMAIN/s: Zinc finger, CHCC-type (InterPro:IPR019401), NADH dehydrogenase [ubiquinone] (complex I), iron-sulphur protein 6, mitochondria (InterPro:IPR016668); Has 288 Blast hits to 288 proteins in 139 species: Archae - 0; Bacteria - 2; Metazoa - 142; Fungi - 84; Plants - 40; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|38666 : 123.0) no description available & (reliability: 328.0) & (original description: Putative At3g03070, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial, PFAM = PF10276)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf01063_650258-658202' '(at3g03100 : 263.0) NADH:ubiquinone oxidoreductase, 17.2kDa subunit; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 17.2kDa subunit (InterPro:IPR007763); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38592 : 168.0) no description available & (gnl|cdd|68638 : 137.0) no description available & (reliability: 526.0) & (original description: Putative At3g03100, Description = Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12, PFAM = PF05071)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf01241_436489-438773' '(at2g02050 : 117.0) NADH-ubiquinone oxidoreductase B18 subunit, putative; FUNCTIONS IN: NADH dehydrogenase activity, NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: mitochondrial electron transport, NADH to ubiquinone, photorespiration; LOCATED IN: mitochondrion, mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, B18 subunit (InterPro:IPR008698); Has 270 Blast hits to 270 proteins in 128 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi - 75; Plants - 50; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|38678 : 101.0) no description available & (reliability: 234.0) & (original description: Putative At2g02050, Description = NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, PFAM = PF05676)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf01375_726441-734965' '(at5g52840 : 237.0) NADH-ubiquinone oxidoreductase-related; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: photorespiration; LOCATED IN: mitochondrion, mitochondrial membrane, chloroplast, respiratory chain complex I, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ETC complex I subunit (InterPro:IPR006806); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28005.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38575 : 125.0) no description available & (reliability: 474.0) & (original description: Putative At5g52840, Description = Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial, PFAM = PF04716)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf01494_206556-210017' '(q37680|nu5m_wheat : 792.0) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5) - Triticum aestivum (Wheat) & (atmg00665 : 789.0) Mitochondrial NADH dehydrogenase subunit 5. The gene is trans-spliced from three different pre-cursors, NAD5a, NAD5b and NAD5c.; NADH dehydrogenase 5B (NAD5B); CONTAINS InterPro DOMAIN/s: NADH-plastoquinone oxidoreductase, chain 5 (InterPro:IPR003945), NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal (InterPro:IPR001516), NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 5A (TAIR:ATMG00513.1). & (gnl|cdd|81988 : 561.0) no description available & (gnl|cdd|39867 : 237.0) no description available & (reliability: 1578.0) & (original description: Putative nad5, Description = NADH-ubiquinone oxidoreductase chain 5, PFAM = PF00662;PF00361)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf01512_720652-740753' '(q43844|ndus7_soltu : 317.0) NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) - Solanum tuberosum (Potato) & (gnl|cdd|36900 : 302.0) no description available & (at5g11770 : 284.0) NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity, zinc ion binding; INVOLVED IN: oxidation reduction, mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrion, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase-like, 20kDa subunit (InterPro:IPR006137), [NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB (InterPro:IPR014406), NADH:ubiquinone oxidoreductase, 20kDa subunit (InterPro:IPR006138); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein G (TAIR:ATCG00430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81942 : 282.0) no description available & (reliability: 568.0) & (original description: Putative nuoB, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial, PFAM = PF01058)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf02627_193170-204237' '(at4g26965 : 188.0) NADH:ubiquinone oxidoreductase, 17.2kDa subunit; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 17.2kDa subunit (InterPro:IPR007763); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative At4g26965, Description = NADH:ubiquinone oxidoreductase subunit-17.2, PFAM = PF05071)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf02723_51704-65690' '(at5g67590 : 148.0) Mutant leaves have a reduced capacity for cold acclimation, appear water-soaked, leak electrolytes, and accumulate reactive oxygen species constitutively. Encode a protein with high similarity to the 18-kD Fe-S subunit of complex I (NADH dehydrogenase, EC 1.6.5.3) in the mitochondrial electron transfer chain.; FROSTBITE1 (FRO1); CONTAINS InterPro DOMAIN/s: ETC complex I subunit conserved region (InterPro:IPR006885); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38599 : 133.0) no description available & (gnl|cdd|68375 : 115.0) no description available & (reliability: 296.0) & (original description: Putative FRO1, Description = NADH dehydrogenase (Ubiquinone) Fe-S protein 4, PFAM = PF04800)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf02881_610399-612802' '(at1g49140 : 164.0) Complex I subunit NDUFS6; CONTAINS InterPro DOMAIN/s: NADH-ubiquinone oxidoreductase, subunit 10 (InterPro:IPR019377), Complex I subunit NDUFS6 (InterPro:IPR020163); BEST Arabidopsis thaliana protein match is: Complex I subunit NDUFS6 (TAIR:AT3G18410.2); Has 165 Blast hits to 165 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 92; Plants - 61; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|39212 : 89.8) no description available & (reliability: 328.0) & (original description: Putative At3g18410, Description = NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B, PFAM = PF10249)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf02974_200304-202696' '(at3g18410 : 157.0) Complex I subunit NDUFS6; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photorespiration; LOCATED IN: mitochondrion, mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; CONTAINS InterPro DOMAIN/s: NADH-ubiquinone oxidoreductase, subunit 10 (InterPro:IPR019377), Complex I subunit NDUFS6 (InterPro:IPR020163); BEST Arabidopsis thaliana protein match is: Complex I subunit NDUFS6 (TAIR:AT1G49140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39212 : 85.2) no description available & (reliability: 314.0) & (original description: Putative At3g18410, Description = NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B, PFAM = PF10249)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf03104_333424-340060' '(at4g04860 : 392.0) DERLIN-2.2 (DER2.2); CONTAINS InterPro DOMAIN/s: Der1-like (InterPro:IPR007599); BEST Arabidopsis thaliana protein match is: DERLIN-2.1 (TAIR:AT4G21810.1); Has 863 Blast hits to 862 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 343; Fungi - 190; Plants - 145; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (q4g2j3|der22_maize : 384.0) Derlin-2.2 (ZmDerlin2-2) - Zea mays (Maize) & (gnl|cdd|36076 : 250.0) no description available & (gnl|cdd|86674 : 169.0) no description available & (reliability: 768.0) & (original description: Putative derl2, Description = Derlin, PFAM = PF04511)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf03341_143746-191520' '(at3g03100 : 224.0) NADH:ubiquinone oxidoreductase, 17.2kDa subunit; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 17.2kDa subunit (InterPro:IPR007763); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38592 : 147.0) no description available & (gnl|cdd|68638 : 140.0) no description available & (reliability: 448.0) & (original description: Putative At3g03100, Description = Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12, PFAM = PF05071)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf03365_27072-39722' '(at2g20360 : 442.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, respiratory chain complex I, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); Has 5254 Blast hits to 5252 proteins in 1137 species: Archae - 81; Bacteria - 3082; Metazoa - 148; Fungi - 134; Plants - 101; Viruses - 0; Other Eukaryotes - 1708 (source: NCBI BLink). & (gnl|cdd|38076 : 371.0) no description available & (gnl|cdd|31046 : 86.1) no description available & (reliability: 884.0) & (original description: Putative ndufa9a, Description = NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex, 9, PFAM = PF13460)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf03365_28511-43629' '(at2g20360 : 551.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, respiratory chain complex I, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); Has 5254 Blast hits to 5252 proteins in 1137 species: Archae - 81; Bacteria - 3082; Metazoa - 148; Fungi - 134; Plants - 101; Viruses - 0; Other Eukaryotes - 1708 (source: NCBI BLink). & (gnl|cdd|38076 : 454.0) no description available & (gnl|cdd|31046 : 93.4) no description available & (reliability: 1102.0) & (original description: Putative nuoA9, Description = NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial, PFAM = PF13460)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf03396_502238-504921' '(atmg00270 : 332.0) NADH dehydrogenase subunit 6; NADH dehydrogenase 6 (NAD6); CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 (InterPro:IPR001457); BEST Arabidopsis thaliana protein match is: Cytochrome b/b6 protein (TAIR:ATMG00590.1). & (p60498|nu6m_bracm : 332.0) NADH-ubiquinone oxidoreductase chain 6 (EC 1.6.5.3) (NADH dehydrogenase subunit 6) - Brassica campestris (Field mustard) & (gnl|cdd|81994 : 132.0) no description available & (reliability: 664.0) & (original description: Putative nad6, Description = NADH-ubiquinone oxidoreductase chain 6, PFAM = PF00499)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf03953_266252-268605' '(p27062|nu3m_pangi : 176.0) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH dehydrogenase subunit 3) - Panax ginseng (Korean ginseng) & (atmg00990 : 152.0) NADH dehydrogenase subunit 3; NADH dehydrogenase 3 (NAD3); CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 (InterPro:IPR000440); BEST Arabidopsis thaliana protein match is: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein (TAIR:AT2G07751.1). & (gnl|cdd|81991 : 123.0) no description available & (gnl|cdd|39861 : 110.0) no description available & (reliability: 304.0) & (original description: Putative ND3, Description = NADH-ubiquinone oxidoreductase chain 3, PFAM = PF00507)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf04114_63184-68780' '(q01300|nu1m_pethy : 141.0) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1) - Petunia hybrida (Petunia) & (atmg01275 : 134.0) Encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from three precursors, NAD1A, NAD1B, and NAD1C.; NADH dehydrogenase 1A (NAD1A); INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrial respiratory chain complex I, respiratory chain complex I; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit 1 (InterPro:IPR001694), NADH:ubiquinone oxidoreductase, subunit 1, conserved site (InterPro:IPR018086); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 1C (TAIR:ATMG00516.1). & (gnl|cdd|39967 : 107.0) no description available & (gnl|cdd|84559 : 107.0) no description available & (reliability: 268.0) & (original description: Putative nad1, Description = NADH-ubiquinone oxidoreductase chain 1, PFAM = PF00146)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf04420_528447-542829' '(at2g47690 : 134.0) NADH-ubiquinone oxidoreductase-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photorespiration; LOCATED IN: mitochondrion, mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: NADH-ubiquinone oxidoreductase-related (TAIR:AT3G62790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative At3g62790, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B, PFAM = PF10200)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf04607_424707-431565' '(at5g67590 : 176.0) Mutant leaves have a reduced capacity for cold acclimation, appear water-soaked, leak electrolytes, and accumulate reactive oxygen species constitutively. Encode a protein with high similarity to the 18-kD Fe-S subunit of complex I (NADH dehydrogenase, EC 1.6.5.3) in the mitochondrial electron transfer chain.; FROSTBITE1 (FRO1); CONTAINS InterPro DOMAIN/s: ETC complex I subunit conserved region (InterPro:IPR006885); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38599 : 162.0) no description available & (gnl|cdd|68375 : 124.0) no description available & (reliability: 352.0) & (original description: Putative FRO1, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, PFAM = PF04800)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf05079_67012-69524' '(p27572|nu4m_wheat : 223.0) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4) - Triticum aestivum (Wheat) & (atmg00580 : 222.0) NADH dehydrogenase subunit 4; NADH dehydrogenase subunit 4 (NAD4); CONTAINS InterPro DOMAIN/s: NADH-quinone oxidoreductase, chain M (InterPro:IPR010227), NADH:ubiquinone oxidoreductase, chain 4 (InterPro:IPR003918), NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH-Ubiquinone/plastoquinone (complex I) protein (TAIR:ATCG01050.1). & (gnl|cdd|40042 : 178.0) no description available & (gnl|cdd|81762 : 173.0) no description available & (reliability: 444.0) & (original description: Putative nad4, Description = NADH-ubiquinone oxidoreductase chain 4, PFAM = PF00361)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf05506_49495-52698' '(at5g47890 : 130.0) NADH-ubiquinone oxidoreductase B8 subunit, putative; CONTAINS InterPro DOMAIN/s: Ribosomal protein/NADH dehydrogenase domain (InterPro:IPR007741), NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2 (InterPro:IPR016464); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38656 : 113.0) no description available & (reliability: 260.0) & (original description: Putative Os04g0310500, Description = Os04g0310500 protein, PFAM = PF05047)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf05588_1274883-1278747' '(at5g08530 : 885.0) 51 kDa subunit of complex I (CI51); FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, NAD or NADH binding, FMN binding, NADH dehydrogenase (ubiquinone) activity, oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: oxidation reduction, mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site (InterPro:IPR001949), NADH:ubiquinone oxidoreductase, 51kDa subunit (InterPro:IPR011538), NADH ubiquinone oxidoreductase, F subunit (InterPro:IPR011537), Soluble ligand binding domain (InterPro:IPR019554), NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding (InterPro:IPR019575); Has 8894 Blast hits to 8884 proteins in 1703 species: Archae - 49; Bacteria - 4484; Metazoa - 213; Fungi - 125; Plants - 97; Viruses - 0; Other Eukaryotes - 3926 (source: NCBI BLink). & (gnl|cdd|37869 : 814.0) no description available & (gnl|cdd|32078 : 638.0) no description available & (reliability: 1770.0) & (original description: Putative frr, Description = NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial, PFAM = PF01512;PF10589;PF10531)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf05654_30562-32471' '(at2g07689 : 353.0) NADH-Ubiquinone/plastoquinone (complex I) protein; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: oxidation reduction, mitochondrial electron transport, NADH to ubiquinone, ATP synthesis coupled electron transport; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 2B (TAIR:ATMG01320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93401|nu2m_oenbe : 310.0) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH dehydrogenase subunit 2) - Oenothera bertiana (Bertero's evening primrose) & (gnl|cdd|81741 : 165.0) no description available & (gnl|cdd|39867 : 121.0) no description available & (reliability: 706.0) & (original description: Putative nad2, Description = NADH dehydrogenase subunit 2, PFAM = PF00361)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf06203_86642-97692' '(p80269|ndus8_soltu : 398.0) NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 23 kDa subunit) (Complex I-23kD) (CI-23kD) (Complex I-28.5kD) (CI-28.5kD) - Solanum tuberosum (Po & (at1g79010 : 354.0) Alpha-helical ferredoxin; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity, metal ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: 4Fe-4S binding domain (InterPro:IPR001450), NADH-quinone oxidoreductase, chain I (InterPro:IPR010226), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), Alpha-helical ferredoxin (InterPro:IPR009051); BEST Arabidopsis thaliana protein match is: Alpha-helical ferredoxin (TAIR:AT1G16700.1); Has 11535 Blast hits to 10912 proteins in 2421 species: Archae - 1438; Bacteria - 6995; Metazoa - 154; Fungi - 106; Plants - 790; Viruses - 1; Other Eukaryotes - 2051 (source: NCBI BLink). & (gnl|cdd|38466 : 304.0) no description available & (gnl|cdd|81787 : 237.0) no description available & (reliability: 708.0) & (original description: Putative dxr, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial, PFAM = PF12838)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf07275_16612-19770' '(at5g47890 : 132.0) NADH-ubiquinone oxidoreductase B8 subunit, putative; CONTAINS InterPro DOMAIN/s: Ribosomal protein/NADH dehydrogenase domain (InterPro:IPR007741), NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2 (InterPro:IPR016464); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38656 : 113.0) no description available & (reliability: 264.0) & (original description: Putative At5g47890, Description = NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2, PFAM = PF05047)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf07790_345442-351543' '(at4g04860 : 395.0) DERLIN-2.2 (DER2.2); CONTAINS InterPro DOMAIN/s: Der1-like (InterPro:IPR007599); BEST Arabidopsis thaliana protein match is: DERLIN-2.1 (TAIR:AT4G21810.1); Has 863 Blast hits to 862 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 343; Fungi - 190; Plants - 145; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (q851x7|derl2_orysa : 385.0) Derlin-2 (OsDerlin 2-1) - Oryza sativa (Rice) & (gnl|cdd|36076 : 254.0) no description available & (gnl|cdd|86674 : 169.0) no description available & (reliability: 776.0) & (original description: Putative derl2, Description = Derlin, PFAM = PF04511)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf09071_108262-133832' '(at2g20360 : 551.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, respiratory chain complex I, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); Has 5254 Blast hits to 5252 proteins in 1137 species: Archae - 81; Bacteria - 3082; Metazoa - 148; Fungi - 134; Plants - 101; Viruses - 0; Other Eukaryotes - 1708 (source: NCBI BLink). & (gnl|cdd|38076 : 455.0) no description available & (gnl|cdd|31046 : 93.4) no description available & (reliability: 1102.0) & (original description: Putative At2g20360, Description = NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial, PFAM = PF13460)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf09321_69753-73250' '(gnl|cdd|36900 : 299.0) no description available & (q43844|ndus7_soltu : 286.0) NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) - Solanum tuberosum (Potato) & (gnl|cdd|81942 : 286.0) no description available & (at5g11770 : 281.0) NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity, zinc ion binding; INVOLVED IN: oxidation reduction, mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrion, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase-like, 20kDa subunit (InterPro:IPR006137), [NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB (InterPro:IPR014406), NADH:ubiquinone oxidoreductase, 20kDa subunit (InterPro:IPR006138); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein G (TAIR:ATCG00430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 562.0) & (original description: Putative nuoB, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial, PFAM = PF01058)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf12089_71544-80149' '(at5g18800 : 158.0) Cox19-like CHCH family protein; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrial respiratory chain complex I; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT3G06310.3); Has 415 Blast hits to 415 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 232; Fungi - 109; Plants - 65; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|38668 : 125.0) no description available & (reliability: 316.0) & (original description: Putative At5g18800, Description = NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B, PFAM = PF06747)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf15047_7907-10671' '(gnl|cdd|36900 : 156.0) no description available & (gnl|cdd|81942 : 143.0) no description available & (q43844|ndus7_soltu : 127.0) NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) - Solanum tuberosum (Potato) & (at5g11770 : 126.0) NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity, zinc ion binding; INVOLVED IN: oxidation reduction, mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrion, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase-like, 20kDa subunit (InterPro:IPR006137), [NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB (InterPro:IPR014406), NADH:ubiquinone oxidoreductase, 20kDa subunit (InterPro:IPR006138); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein G (TAIR:ATCG00430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative nuoB, Description = NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial, PFAM = PF01058)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf25598_42107-45681' '(atmg01320 : 267.0) encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from two precursors, NAD2A and NAD2B.; NADH dehydrogenase 2B (NAD2B); CONTAINS InterPro DOMAIN/s: NADH-quinone oxidoreductase, chain N (InterPro:IPR010096), NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 2A (TAIR:ATMG00285.1). & (p93401|nu2m_oenbe : 243.0) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH dehydrogenase subunit 2) - Oenothera bertiana (Bertero's evening primrose) & (gnl|cdd|81741 : 94.0) no description available & (reliability: 534.0) & (original description: Putative nad2, Description = NADH dehydrogenase subunit 2, PFAM = PF00361)' T '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'niben101scf30554_7028-12641' '(q01300|nu1m_pethy : 192.0) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1) - Petunia hybrida (Petunia) & (atmg01275 : 184.0) Encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from three precursors, NAD1A, NAD1B, and NAD1C.; NADH dehydrogenase 1A (NAD1A); INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrial respiratory chain complex I, respiratory chain complex I; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit 1 (InterPro:IPR001694), NADH:ubiquinone oxidoreductase, subunit 1, conserved site (InterPro:IPR018086); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 1C (TAIR:ATMG00516.1). & (gnl|cdd|39967 : 153.0) no description available & (gnl|cdd|84559 : 149.0) no description available & (reliability: 368.0) & (original description: Putative orf108c, Description = NADH-ubiquinone oxidoreductase chain 1, PFAM = PF00146)' T '9.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH' '' '' '9.2.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II' '' '' '9.2.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II.external' 'niben044scf00003675ctg002_12508-20238' '(at4g05020 : 898.0) NAD(P)H dehydrogenase B2 (NDB2); FUNCTIONS IN: disulfide oxidoreductase activity, oxidoreductase activity, FAD binding, calcium ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion, extrinsic to mitochondrial inner membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), EF-HAND 2 (InterPro:IPR018249), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: NAD(P)H dehydrogenase B3 (TAIR:AT4G21490.1). & (gnl|cdd|37706 : 515.0) no description available & (gnl|cdd|31444 : 268.0) no description available & (reliability: 1796.0) & (original description: Putative NDB2, Description = External alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochondrial, PFAM = PF00036;PF07992)' T '9.2.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II.external' 'niben101scf00214_325587-332550' '(at4g21490 : 817.0) NAD(P)H dehydrogenase B3 (NDB3); FUNCTIONS IN: NADH dehydrogenase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), EF-HAND 2 (InterPro:IPR018249), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: NAD(P)H dehydrogenase B2 (TAIR:AT4G05020.1); Has 16626 Blast hits to 16156 proteins in 2577 species: Archae - 456; Bacteria - 13275; Metazoa - 114; Fungi - 758; Plants - 505; Viruses - 0; Other Eukaryotes - 1518 (source: NCBI BLink). & (gnl|cdd|37706 : 499.0) no description available & (gnl|cdd|31444 : 268.0) no description available & (reliability: 1634.0) & (original description: Putative NDB3, Description = External alternative NAD(P)H-ubiquinone oxidoreductase B3, mitochondrial, PFAM = PF07992)' T '9.2.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II.external' 'niben101scf00756_178090-184493' '(at4g28220 : 822.0) NAD(P)H dehydrogenase B1 (NDB1); FUNCTIONS IN: NADH dehydrogenase activity, disulfide oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: extrinsic to mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), EF-HAND 2 (InterPro:IPR018249); BEST Arabidopsis thaliana protein match is: NAD(P)H dehydrogenase B3 (TAIR:AT4G21490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37706 : 485.0) no description available & (gnl|cdd|31444 : 265.0) no description available & (reliability: 1644.0) & (original description: Putative NDB1, Description = External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial, PFAM = PF07992)' T '9.2.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II.external' 'niben101scf01529_449380-457157' '(at4g05020 : 909.0) NAD(P)H dehydrogenase B2 (NDB2); FUNCTIONS IN: disulfide oxidoreductase activity, oxidoreductase activity, FAD binding, calcium ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion, extrinsic to mitochondrial inner membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), EF-HAND 2 (InterPro:IPR018249), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: NAD(P)H dehydrogenase B3 (TAIR:AT4G21490.1). & (gnl|cdd|37706 : 524.0) no description available & (gnl|cdd|31444 : 270.0) no description available & (reliability: 1818.0) & (original description: Putative NDB2, Description = External alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochondrial, PFAM = PF00036;PF07992)' T '9.2.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II.external' 'niben101scf02869_284075-291529' '(gnl|cdd|37706 : 113.0) no description available & (at4g28220 : 94.4) NAD(P)H dehydrogenase B1 (NDB1); FUNCTIONS IN: NADH dehydrogenase activity, disulfide oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: extrinsic to mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), EF-HAND 2 (InterPro:IPR018249); BEST Arabidopsis thaliana protein match is: NAD(P)H dehydrogenase B3 (TAIR:AT4G21490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative NDB1, Description = NAD(P)H dehydrogenase B2, PFAM = )' T '9.2.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II.external' 'niben101scf07823_424-9507' '(at4g28220 : 819.0) NAD(P)H dehydrogenase B1 (NDB1); FUNCTIONS IN: NADH dehydrogenase activity, disulfide oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: extrinsic to mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), EF-HAND 2 (InterPro:IPR018249); BEST Arabidopsis thaliana protein match is: NAD(P)H dehydrogenase B3 (TAIR:AT4G21490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37706 : 483.0) no description available & (gnl|cdd|31444 : 269.0) no description available & (reliability: 1638.0) & (original description: Putative NDB1, Description = External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial, PFAM = PF07992)' T '9.2.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II.external' 'niben101scf16974_62093-83688' '(at4g28220 : 838.0) NAD(P)H dehydrogenase B1 (NDB1); FUNCTIONS IN: NADH dehydrogenase activity, disulfide oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: extrinsic to mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), EF-HAND 2 (InterPro:IPR018249); BEST Arabidopsis thaliana protein match is: NAD(P)H dehydrogenase B3 (TAIR:AT4G21490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37706 : 496.0) no description available & (gnl|cdd|31444 : 273.0) no description available & (reliability: 1676.0) & (original description: Putative NDB1, Description = External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial, PFAM = PF07992)' T '9.2.1.3' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II.mitochondrial' 'niben101scf01227_530979-534677' '(at5g08740 : 689.0) NAD(P)H dehydrogenase C1 (NDC1); FUNCTIONS IN: NADH dehydrogenase activity, oxidoreductase activity, FAD binding; INVOLVED IN: oxidation reduction; LOCATED IN: intrinsic to mitochondrial inner membrane, cell wall, chloroplast, plastoglobule; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: alternative NAD(P)H dehydrogenase 2 (TAIR:AT2G29990.1); Has 10792 Blast hits to 10785 proteins in 2211 species: Archae - 358; Bacteria - 8162; Metazoa - 316; Fungi - 520; Plants - 321; Viruses - 0; Other Eukaryotes - 1115 (source: NCBI BLink). & (gnl|cdd|31444 : 258.0) no description available & (gnl|cdd|37706 : 129.0) no description available & (reliability: 1378.0) & (original description: Putative NDC1, Description = Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial, PFAM = PF07992)' T '9.2.1.4' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II.internal matrix' 'nbv0.3scaffold92622_703-4577' '(at1g07180 : 338.0) Internal NAD(P)H dehydrogenase in mitochondria. The predicted protein sequence has high homology with other designated NAD(P)H DHs from microorganisms; the capacity for matrix NAD(P)H oxidation via the rotenone-insensitive pathway is significantly reduced in the Atndi1 mutant plant line; the in vitro translation product of AtNDI1 is imported into isolated mitochondria and located on the inside of the inner membrane.; alternative NAD(P)H dehydrogenase 1 (NDA1); FUNCTIONS IN: NADH dehydrogenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: intrinsic to mitochondrial inner membrane, mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: alternative NAD(P)H dehydrogenase 2 (TAIR:AT2G29990.1); Has 9792 Blast hits to 9601 proteins in 2135 species: Archae - 248; Bacteria - 7524; Metazoa - 53; Fungi - 647; Plants - 379; Viruses - 0; Other Eukaryotes - 941 (source: NCBI BLink). & (gnl|cdd|37706 : 212.0) no description available & (gnl|cdd|31444 : 123.0) no description available & (reliability: 676.0) & (original description: Putative NDA1, Description = Putative NADH dehydrogenase, PFAM = PF07992)' T '9.2.1.4' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II.internal matrix' 'niben044scf00028150ctg000_7523-12289' '(at2g29990 : 681.0) alternative NAD(P)H dehydrogenase 2 (NDA2); FUNCTIONS IN: NADH dehydrogenase activity, oxidoreductase activity, FAD binding; INVOLVED IN: oxidation reduction; LOCATED IN: intrinsic to mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: alternative NAD(P)H dehydrogenase 1 (TAIR:AT1G07180.1); Has 11797 Blast hits to 11597 proteins in 2273 species: Archae - 301; Bacteria - 9312; Metazoa - 49; Fungi - 695; Plants - 411; Viruses - 0; Other Eukaryotes - 1029 (source: NCBI BLink). & (gnl|cdd|37706 : 514.0) no description available & (gnl|cdd|31444 : 302.0) no description available & (reliability: 1362.0) & (original description: Putative NDA2, Description = Internal alternative NAD(P)H-ubiquinone oxidoreductase A2, mitochondrial, PFAM = PF07992)' T '9.2.1.4' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II.internal matrix' 'niben101scf00180_19039-23941' '(at2g29990 : 671.0) alternative NAD(P)H dehydrogenase 2 (NDA2); FUNCTIONS IN: NADH dehydrogenase activity, oxidoreductase activity, FAD binding; INVOLVED IN: oxidation reduction; LOCATED IN: intrinsic to mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: alternative NAD(P)H dehydrogenase 1 (TAIR:AT1G07180.1); Has 11797 Blast hits to 11597 proteins in 2273 species: Archae - 301; Bacteria - 9312; Metazoa - 49; Fungi - 695; Plants - 411; Viruses - 0; Other Eukaryotes - 1029 (source: NCBI BLink). & (gnl|cdd|37706 : 510.0) no description available & (gnl|cdd|31444 : 301.0) no description available & (reliability: 1342.0) & (original description: Putative NDA2, Description = Internal alternative NAD(P)H-ubiquinone oxidoreductase A2, mitochondrial, PFAM = PF07992)' T '9.2.1.4' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II.internal matrix' 'niben101scf05880_368849-375459' '(at1g07180 : 726.0) Internal NAD(P)H dehydrogenase in mitochondria. The predicted protein sequence has high homology with other designated NAD(P)H DHs from microorganisms; the capacity for matrix NAD(P)H oxidation via the rotenone-insensitive pathway is significantly reduced in the Atndi1 mutant plant line; the in vitro translation product of AtNDI1 is imported into isolated mitochondria and located on the inside of the inner membrane.; alternative NAD(P)H dehydrogenase 1 (NDA1); FUNCTIONS IN: NADH dehydrogenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: intrinsic to mitochondrial inner membrane, mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: alternative NAD(P)H dehydrogenase 2 (TAIR:AT2G29990.1); Has 9792 Blast hits to 9601 proteins in 2135 species: Archae - 248; Bacteria - 7524; Metazoa - 53; Fungi - 647; Plants - 379; Viruses - 0; Other Eukaryotes - 941 (source: NCBI BLink). & (gnl|cdd|37706 : 522.0) no description available & (gnl|cdd|31444 : 289.0) no description available & (reliability: 1452.0) & (original description: Putative NDA1, Description = Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial, PFAM = PF07992)' T '9.2.1.4' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II.internal matrix' 'niben101scf12528_123671-140366' '(at2g29990 : 753.0) alternative NAD(P)H dehydrogenase 2 (NDA2); FUNCTIONS IN: NADH dehydrogenase activity, oxidoreductase activity, FAD binding; INVOLVED IN: oxidation reduction; LOCATED IN: intrinsic to mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: alternative NAD(P)H dehydrogenase 1 (TAIR:AT1G07180.1); Has 11797 Blast hits to 11597 proteins in 2273 species: Archae - 301; Bacteria - 9312; Metazoa - 49; Fungi - 695; Plants - 411; Viruses - 0; Other Eukaryotes - 1029 (source: NCBI BLink). & (gnl|cdd|37706 : 556.0) no description available & (gnl|cdd|31444 : 295.0) no description available & (reliability: 1506.0) & (original description: Putative NDA2, Description = Internal alternative NAD(P)H-ubiquinone oxidoreductase A2, mitochondrial, PFAM = PF07992)' T '9.3' 'mitochondrial electron transport / ATP synthesis.electron transfer flavoprotein' 'nbv0.5scaffold322_479553-482027' '(at2g43400 : 112.0) Encodes a unique electron-transfer flavoprotein:ubiquinone oxidoreductase that is localized to the mitochondrion. Mutants are more sensitive to sugar starvation when plants are kept in the dark for long periods.; electron-transfer flavoprotein:ubiquinone oxidoreductase (ETFQO); FUNCTIONS IN: electron carrier activity, catalytic activity, electron-transferring-flavoprotein dehydrogenase activity; INVOLVED IN: response to absence of light, leucine catabolic process; LOCATED IN: mitochondrial envelope, mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Electron transfer flavoprotein-ubiquinone oxidoreductase (InterPro:IPR007859); Has 5881 Blast hits to 5877 proteins in 1100 species: Archae - 188; Bacteria - 2470; Metazoa - 147; Fungi - 158; Plants - 31; Viruses - 0; Other Eukaryotes - 2887 (source: NCBI BLink). & (gnl|cdd|37626 : 112.0) no description available & (reliability: 224.0) & (original description: Putative etf, Description = Electron transfer flavoprotein-ubiquinone oxidoreductase, PFAM = PF13450)' T '9.3' 'mitochondrial electron transport / ATP synthesis.electron transfer flavoprotein' 'nbv0.5scaffold719_101511-107095' '(at5g43430 : 372.0) Encodes the electron transfer flavoprotein ETF beta, a putative subunit of the mitochondrial electron transfer flavoprotein complex (ETF alpha is At1g50940) in Arabidopsis. Mutations of the ETF beta gene result in accelerated senescence and early death compared to wild-type during extended darkness. Also involved in the catabolism of leucine and chlorophyll degradation pathway activated during darkness-induced carbohydrate deprivation.; electron transfer flavoprotein beta (ETFBETA); FUNCTIONS IN: electron carrier activity; INVOLVED IN: chlorophyll catabolic process, leucine catabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Electron transfer flavoprotein, beta-subunit, conserved site (InterPro:IPR000049), Electron transfer flavoprotein, beta subunit (InterPro:IPR012255), Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (InterPro:IPR014730); Has 6953 Blast hits to 6953 proteins in 1650 species: Archae - 156; Bacteria - 4220; Metazoa - 148; Fungi - 127; Plants - 47; Viruses - 0; Other Eukaryotes - 2255 (source: NCBI BLink). & (gnl|cdd|38390 : 335.0) no description available & (gnl|cdd|32269 : 240.0) no description available & (reliability: 744.0) & (original description: Putative ETFB, Description = Electron transfer flavoprotein subunit beta, mitochondrial, PFAM = PF01012)' T '9.3' 'mitochondrial electron transport / ATP synthesis.electron transfer flavoprotein' 'niben101scf00415_400657-406621' '(at5g43430 : 372.0) Encodes the electron transfer flavoprotein ETF beta, a putative subunit of the mitochondrial electron transfer flavoprotein complex (ETF alpha is At1g50940) in Arabidopsis. Mutations of the ETF beta gene result in accelerated senescence and early death compared to wild-type during extended darkness. Also involved in the catabolism of leucine and chlorophyll degradation pathway activated during darkness-induced carbohydrate deprivation.; electron transfer flavoprotein beta (ETFBETA); FUNCTIONS IN: electron carrier activity; INVOLVED IN: chlorophyll catabolic process, leucine catabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Electron transfer flavoprotein, beta-subunit, conserved site (InterPro:IPR000049), Electron transfer flavoprotein, beta subunit (InterPro:IPR012255), Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (InterPro:IPR014730); Has 6953 Blast hits to 6953 proteins in 1650 species: Archae - 156; Bacteria - 4220; Metazoa - 148; Fungi - 127; Plants - 47; Viruses - 0; Other Eukaryotes - 2255 (source: NCBI BLink). & (gnl|cdd|38390 : 335.0) no description available & (gnl|cdd|32269 : 241.0) no description available & (reliability: 744.0) & (original description: Putative ETFB, Description = Electron transfer flavoprotein subunit beta, mitochondrial, PFAM = PF01012)' T '9.3' 'mitochondrial electron transport / ATP synthesis.electron transfer flavoprotein' 'niben101scf11774_112878-119652' '(at1g50940 : 404.0) Encodes the electron transfer flavoprotein ETF alpha, a putative subunit of the mitochondrial electron transfer flavoprotein complex (ETF beta is At5g43430.1) in Arabidopsis. Mutations of the ETF beta gene results in accelerated senescence and early death compared to wild-type during extended darkness.; electron transfer flavoprotein alpha (ETFALPHA); FUNCTIONS IN: copper ion binding; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Electron transfer flavoprotein, alpha subunit, C-terminal (InterPro:IPR014731), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (InterPro:IPR014730), Electron transfer flavoprotein, alpha subunit (InterPro:IPR001308), Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site (InterPro:IPR018206); Has 7540 Blast hits to 7533 proteins in 1658 species: Archae - 158; Bacteria - 4517; Metazoa - 162; Fungi - 143; Plants - 45; Viruses - 0; Other Eukaryotes - 2515 (source: NCBI BLink). & (gnl|cdd|39157 : 359.0) no description available & (gnl|cdd|32208 : 272.0) no description available & (reliability: 808.0) & (original description: Putative ETFA, Description = Electron transfer flavoprotein subunit alpha, mitochondrial, PFAM = PF00766;PF01012)' T '9.3' 'mitochondrial electron transport / ATP synthesis.electron transfer flavoprotein' 'niben101scf20935_11306-36330' '(at2g43400 : 912.0) Encodes a unique electron-transfer flavoprotein:ubiquinone oxidoreductase that is localized to the mitochondrion. Mutants are more sensitive to sugar starvation when plants are kept in the dark for long periods.; electron-transfer flavoprotein:ubiquinone oxidoreductase (ETFQO); FUNCTIONS IN: electron carrier activity, catalytic activity, electron-transferring-flavoprotein dehydrogenase activity; INVOLVED IN: response to absence of light, leucine catabolic process; LOCATED IN: mitochondrial envelope, mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Electron transfer flavoprotein-ubiquinone oxidoreductase (InterPro:IPR007859); Has 5881 Blast hits to 5877 proteins in 1100 species: Archae - 188; Bacteria - 2470; Metazoa - 147; Fungi - 158; Plants - 31; Viruses - 0; Other Eukaryotes - 2887 (source: NCBI BLink). & (gnl|cdd|37626 : 859.0) no description available & (gnl|cdd|30989 : 260.0) no description available & (reliability: 1824.0) & (original description: Putative ETFQO, Description = Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial, PFAM = PF13450;PF05187)' T '9.4' 'mitochondrial electron transport / ATP synthesis.alternative oxidase' 'nbv0.5scaffold118_193336-197318' '(q40578|aox2_tobac : 409.0) Alternative oxidase 2, mitochondrial precursor (EC 1.-.-.-) - Nicotiana tabacum (Common tobacco) & (at3g22370 : 407.0) Encodes AOX1a, an isoform of alternative oxidase that is expressed in rosettes, flowers, and root. The alternative oxidase of plant mitochondria transfers electrons from the ubiquinone pool to oxygen without energy conservations. It is regulated through transcriptional control and by pyruvate. Plays a role in shoot acclimation to low temperature. Also is capable of ameliorating reactive oxygen species production when the cytochrome pathway is inhibited. AOX1a also functions as a marker for mitochondrial retrograde response.; alternative oxidase 1A (AOX1A); FUNCTIONS IN: alternative oxidase activity; INVOLVED IN: oxidation reduction, cellular respiration, response to cold, response to stress, mitochondria-nucleus signaling pathway; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Alternative oxidase (InterPro:IPR002680); BEST Arabidopsis thaliana protein match is: alternative oxidase 1B (TAIR:AT3G22360.1); Has 1299 Blast hits to 1299 proteins in 245 species: Archae - 0; Bacteria - 109; Metazoa - 12; Fungi - 194; Plants - 380; Viruses - 0; Other Eukaryotes - 604 (source: NCBI BLink). & (gnl|cdd|85678 : 407.0) no description available & (reliability: 814.0) & (original description: Putative aox, Description = Alternative oxidase, PFAM = PF01786)' T '9.4' 'mitochondrial electron transport / ATP synthesis.alternative oxidase' 'nbv0.5scaffold1495_1203-8446' '(gnl|cdd|85678 : 477.0) no description available & (q41266|aox2_soybn : 441.0) Alternative oxidase 2, mitochondrial precursor (EC 1.-.-.-) - Glycine max (Soybean) & (at5g64210 : 431.0) encodes an isoform of alternative oxidase, which is expressed in rosettes, stems, and roots. Transcript accumulates in dry seeds and decreased upon germination and is not affected by actinomycin A. Protein is localized to mitochondria.; alternative oxidase 2 (AOX2); CONTAINS InterPro DOMAIN/s: Alternative oxidase (InterPro:IPR002680); BEST Arabidopsis thaliana protein match is: alternative oxidase 1A (TAIR:AT3G22370.1); Has 1305 Blast hits to 1305 proteins in 244 species: Archae - 0; Bacteria - 111; Metazoa - 12; Fungi - 191; Plants - 373; Viruses - 0; Other Eukaryotes - 618 (source: NCBI BLink). & (reliability: 862.0) & (original description: Putative aox, Description = Ubiquinol oxidase, PFAM = PF01786)' T '9.4' 'mitochondrial electron transport / ATP synthesis.alternative oxidase' 'niben044scf00005203ctg022_3071-9657' '(gnl|cdd|85678 : 478.0) no description available & (q41266|aox2_soybn : 441.0) Alternative oxidase 2, mitochondrial precursor (EC 1.-.-.-) - Glycine max (Soybean) & (at5g64210 : 430.0) encodes an isoform of alternative oxidase, which is expressed in rosettes, stems, and roots. Transcript accumulates in dry seeds and decreased upon germination and is not affected by actinomycin A. Protein is localized to mitochondria.; alternative oxidase 2 (AOX2); CONTAINS InterPro DOMAIN/s: Alternative oxidase (InterPro:IPR002680); BEST Arabidopsis thaliana protein match is: alternative oxidase 1A (TAIR:AT3G22370.1); Has 1305 Blast hits to 1305 proteins in 244 species: Archae - 0; Bacteria - 111; Metazoa - 12; Fungi - 191; Plants - 373; Viruses - 0; Other Eukaryotes - 618 (source: NCBI BLink). & (reliability: 860.0) & (original description: Putative aox, Description = Ubiquinol oxidase, PFAM = PF01786)' T '9.4' 'mitochondrial electron transport / ATP synthesis.alternative oxidase' 'niben101scf00239_714738-718706' '(q41224|aox1_tobac : 672.0) Alternative oxidase 1, mitochondrial precursor (EC 1.-.-.-) - Nicotiana tabacum (Common tobacco) & (at3g22370 : 504.0) Encodes AOX1a, an isoform of alternative oxidase that is expressed in rosettes, flowers, and root. The alternative oxidase of plant mitochondria transfers electrons from the ubiquinone pool to oxygen without energy conservations. It is regulated through transcriptional control and by pyruvate. Plays a role in shoot acclimation to low temperature. Also is capable of ameliorating reactive oxygen species production when the cytochrome pathway is inhibited. AOX1a also functions as a marker for mitochondrial retrograde response.; alternative oxidase 1A (AOX1A); FUNCTIONS IN: alternative oxidase activity; INVOLVED IN: oxidation reduction, cellular respiration, response to cold, response to stress, mitochondria-nucleus signaling pathway; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Alternative oxidase (InterPro:IPR002680); BEST Arabidopsis thaliana protein match is: alternative oxidase 1B (TAIR:AT3G22360.1); Has 1299 Blast hits to 1299 proteins in 245 species: Archae - 0; Bacteria - 109; Metazoa - 12; Fungi - 194; Plants - 380; Viruses - 0; Other Eukaryotes - 604 (source: NCBI BLink). & (gnl|cdd|85678 : 497.0) no description available & (reliability: 1008.0) & (original description: Putative AOX1, Description = Ubiquinol oxidase 1, mitochondrial, PFAM = PF01786)' T '9.4' 'mitochondrial electron transport / ATP synthesis.alternative oxidase' 'niben101scf06109_48826-52755' '(q41224|aox1_tobac : 644.0) Alternative oxidase 1, mitochondrial precursor (EC 1.-.-.-) - Nicotiana tabacum (Common tobacco) & (at3g22370 : 490.0) Encodes AOX1a, an isoform of alternative oxidase that is expressed in rosettes, flowers, and root. The alternative oxidase of plant mitochondria transfers electrons from the ubiquinone pool to oxygen without energy conservations. It is regulated through transcriptional control and by pyruvate. Plays a role in shoot acclimation to low temperature. Also is capable of ameliorating reactive oxygen species production when the cytochrome pathway is inhibited. AOX1a also functions as a marker for mitochondrial retrograde response.; alternative oxidase 1A (AOX1A); FUNCTIONS IN: alternative oxidase activity; INVOLVED IN: oxidation reduction, cellular respiration, response to cold, response to stress, mitochondria-nucleus signaling pathway; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Alternative oxidase (InterPro:IPR002680); BEST Arabidopsis thaliana protein match is: alternative oxidase 1B (TAIR:AT3G22360.1); Has 1299 Blast hits to 1299 proteins in 245 species: Archae - 0; Bacteria - 109; Metazoa - 12; Fungi - 194; Plants - 380; Viruses - 0; Other Eukaryotes - 604 (source: NCBI BLink). & (gnl|cdd|85678 : 488.0) no description available & (reliability: 980.0) & (original description: Putative AOX1, Description = Ubiquinol oxidase 1, mitochondrial, PFAM = PF01786)' T '9.4' 'mitochondrial electron transport / ATP synthesis.alternative oxidase' 'niben101scf07773_136550-143808' '(gnl|cdd|85678 : 477.0) no description available & (q41266|aox2_soybn : 442.0) Alternative oxidase 2, mitochondrial precursor (EC 1.-.-.-) - Glycine max (Soybean) & (at5g64210 : 431.0) encodes an isoform of alternative oxidase, which is expressed in rosettes, stems, and roots. Transcript accumulates in dry seeds and decreased upon germination and is not affected by actinomycin A. Protein is localized to mitochondria.; alternative oxidase 2 (AOX2); CONTAINS InterPro DOMAIN/s: Alternative oxidase (InterPro:IPR002680); BEST Arabidopsis thaliana protein match is: alternative oxidase 1A (TAIR:AT3G22370.1); Has 1305 Blast hits to 1305 proteins in 244 species: Archae - 0; Bacteria - 111; Metazoa - 12; Fungi - 191; Plants - 373; Viruses - 0; Other Eukaryotes - 618 (source: NCBI BLink). & (reliability: 862.0) & (original description: Putative aox, Description = Ubiquinol oxidase, PFAM = PF01786)' T '9.5' 'mitochondrial electron transport / ATP synthesis.cytochrome c reductase' 'nbv0.3scaffold18290_18298-25945' '(p46270|ucr10_soltu : 110.0) Ubiquinol-cytochrome c reductase complex 8.0 kDa protein (EC 1.10.2.2) - Solanum tuberosum (Potato) & (at3g52730 : 108.0) ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein; FUNCTIONS IN: ubiquinol-cytochrome-c reductase activity; INVOLVED IN: mitochondrial electron transport, ubiquinol to cytochrome c; LOCATED IN: mitochondrial envelope, mitochondrion, mitochondrial respiratory chain complex III, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquinol-cytochrome C reductase, UQCRX/QCR9-like (InterPro:IPR008027); Has 75 Blast hits to 75 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 19; Plants - 51; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|38704 : 88.5) no description available & (reliability: 216.0) & (original description: Putative BnaA04g05280D, Description = Cytochrome b-c1 complex subunit 9, PFAM = PF05365)' T '9.5' 'mitochondrial electron transport / ATP synthesis.cytochrome c reductase' 'nbv0.3scaffold76173_1299-7612' '(p51135|ucri5_tobac : 490.0) Ubiquinol-cytochrome c reductase iron-sulfur subunit 5, mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein 5) (RISP5) - Nicotiana tabacum (Common tobacco) & (at5g13430 : 393.0) Ubiquinol-cytochrome C reductase iron-sulfur subunit; FUNCTIONS IN: metal ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III, membrane; EXPRESSED IN: male gametophyte, guard cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquinol-cytochrome c reductase, iron-sulphur subunit (InterPro:IPR006317), Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Rieske iron-sulphur protein, C-terminal (InterPro:IPR005805), Rieske iron-sulphur protein (InterPro:IPR014349), Ubiquinol cytochrome reductase, transmembrane domain (InterPro:IPR004192); BEST Arabidopsis thaliana protein match is: Ubiquinol-cytochrome C reductase iron-sulfur subunit (TAIR:AT5G13440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36884 : 258.0) no description available & (gnl|cdd|58540 : 225.0) no description available & (reliability: 786.0) & (original description: Putative risp, Description = Cytochrome b-c1 complex subunit Rieske, mitochondrial, PFAM = PF00355;PF02921)' T '9.5' 'mitochondrial electron transport / ATP synthesis.cytochrome c reductase' 'niben101scf00262_321516-325249' '(p46269|ucrq_soltu : 126.0) Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C (EC 1.10.2.2) (Ubiquinol-cytochrome c reductase complex 8.2 kDa protein) - Solanum tuberosum (Potato) & (at5g05370 : 117.0) Cytochrome b-c1 complex, subunit 8 protein; CONTAINS InterPro DOMAIN/s: Cytochrome b-c1 complex, subunit 8 (InterPro:IPR020101); BEST Arabidopsis thaliana protein match is: Cytochrome b-c1 complex, subunit 8 protein (TAIR:AT3G10860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative ucr3, Description = Cytochrome b-c1 complex subunit 8, PFAM = PF10890)' T '9.5' 'mitochondrial electron transport / ATP synthesis.cytochrome c reductase' 'niben101scf00497_731149-736342' '(p51132|ucri2_tobac : 506.0) Ubiquinol-cytochrome c reductase iron-sulfur subunit 2, mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein 2) (RISP2) - Nicotiana tabacum (Common tobacco) & (at5g13440 : 394.0) Ubiquinol-cytochrome C reductase iron-sulfur subunit; FUNCTIONS IN: metal ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Ubiquinol-cytochrome c reductase, iron-sulphur subunit (InterPro:IPR006317), Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Rieske iron-sulphur protein, C-terminal (InterPro:IPR005805), Rieske iron-sulphur protein (InterPro:IPR014349), Ubiquinol cytochrome reductase, transmembrane domain (InterPro:IPR004192); BEST Arabidopsis thaliana protein match is: Ubiquinol-cytochrome C reductase iron-sulfur subunit (TAIR:AT5G13430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36884 : 255.0) no description available & (gnl|cdd|58540 : 222.0) no description available & (reliability: 788.0) & (original description: Putative risp, Description = Cytochrome b-c1 complex subunit Rieske, mitochondrial, PFAM = PF00355;PF02921)' T '9.5' 'mitochondrial electron transport / ATP synthesis.cytochrome c reductase' 'niben101scf00986_232882-246068' '(p51135|ucri5_tobac : 493.0) Ubiquinol-cytochrome c reductase iron-sulfur subunit 5, mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein 5) (RISP5) - Nicotiana tabacum (Common tobacco) & (at5g13440 : 392.0) Ubiquinol-cytochrome C reductase iron-sulfur subunit; FUNCTIONS IN: metal ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Ubiquinol-cytochrome c reductase, iron-sulphur subunit (InterPro:IPR006317), Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Rieske iron-sulphur protein, C-terminal (InterPro:IPR005805), Rieske iron-sulphur protein (InterPro:IPR014349), Ubiquinol cytochrome reductase, transmembrane domain (InterPro:IPR004192); BEST Arabidopsis thaliana protein match is: Ubiquinol-cytochrome C reductase iron-sulfur subunit (TAIR:AT5G13430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36884 : 257.0) no description available & (gnl|cdd|58540 : 225.0) no description available & (reliability: 784.0) & (original description: Putative risp, Description = Cytochrome b-c1 complex subunit Rieske, mitochondrial, PFAM = PF02921;PF00355)' T '9.5' 'mitochondrial electron transport / ATP synthesis.cytochrome c reductase' 'niben101scf01396_419835-426428' '(p48502|ucr6_soltu : 194.0) Ubiquinol-cytochrome c reductase complex 14 kDa protein (EC 1.10.2.2) (CR14) - Solanum tuberosum (Potato) & (at5g25450 : 168.0) Cytochrome bd ubiquinol oxidase, 14kDa subunit; FUNCTIONS IN: ubiquinol-cytochrome-c reductase activity; INVOLVED IN: mitochondrial electron transport, ubiquinol to cytochrome c; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome d ubiquinol oxidase, 14kDa subunit (InterPro:IPR003197); BEST Arabidopsis thaliana protein match is: Cytochrome bd ubiquinol oxidase, 14kDa subunit (TAIR:AT4G32470.1). & (gnl|cdd|38650 : 122.0) no description available & (gnl|cdd|85938 : 105.0) no description available & (reliability: 336.0) & (original description: Putative qcr7, Description = Cytochrome b-c1 complex subunit 7, PFAM = PF02271)' T '9.5' 'mitochondrial electron transport / ATP synthesis.cytochrome c reductase' 'niben101scf02614_83096-89191' '(p46269|ucrq_soltu : 123.0) Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C (EC 1.10.2.2) (Ubiquinol-cytochrome c reductase complex 8.2 kDa protein) - Solanum tuberosum (Potato) & (at5g05370 : 115.0) Cytochrome b-c1 complex, subunit 8 protein; CONTAINS InterPro DOMAIN/s: Cytochrome b-c1 complex, subunit 8 (InterPro:IPR020101); BEST Arabidopsis thaliana protein match is: Cytochrome b-c1 complex, subunit 8 protein (TAIR:AT3G10860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative ucr3, Description = Cytochrome b-c1 complex subunit 8, PFAM = PF10890)' T '9.5' 'mitochondrial electron transport / ATP synthesis.cytochrome c reductase' 'niben101scf03643_252831-256041' '(atmg00220 : 469.0) Mitochondrial apocytochrome b (cob) gene encodes a subunit of the ubiquinol-cytochrome c oxidoreductase and is part of a 5 kb transcript. The transcript also contains a pseudogene for ribosomal protein S14 called RPS15 and a tRNA(Ser) gene. Both the Cob and RPS15 genes are edited in the transcript.; apocytochrome b (COB); FUNCTIONS IN: ubiquinol-cytochrome-c reductase activity; INVOLVED IN: aerobic respiration; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Cytochrome b/b6 (InterPro:IPR016175), Cytochrome b/b6, C-terminal (InterPro:IPR005798), Di-haem cytochrome, transmembrane (InterPro:IPR016174), Cytochrome b/b6, N-terminal (InterPro:IPR005797); BEST Arabidopsis thaliana protein match is: Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal (TAIR:AT2G07727.1). & (p05718|cyb_vicfa : 463.0) Cytochrome b - Vicia faba (Broad bean) & (gnl|cdd|29347 : 207.0) no description available & (gnl|cdd|39862 : 202.0) no description available & (reliability: 938.0) & (original description: Putative cob, Description = Cytochrome b, PFAM = PF00032;PF00033)' T '9.5' 'mitochondrial electron transport / ATP synthesis.cytochrome c reductase' 'niben101scf04103_656711-660799' '(at5g25450 : 166.0) Cytochrome bd ubiquinol oxidase, 14kDa subunit; FUNCTIONS IN: ubiquinol-cytochrome-c reductase activity; INVOLVED IN: mitochondrial electron transport, ubiquinol to cytochrome c; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome d ubiquinol oxidase, 14kDa subunit (InterPro:IPR003197); BEST Arabidopsis thaliana protein match is: Cytochrome bd ubiquinol oxidase, 14kDa subunit (TAIR:AT4G32470.1). & (p48502|ucr6_soltu : 160.0) Ubiquinol-cytochrome c reductase complex 14 kDa protein (EC 1.10.2.2) (CR14) - Solanum tuberosum (Potato) & (gnl|cdd|38650 : 131.0) no description available & (gnl|cdd|85938 : 93.1) no description available & (reliability: 332.0) & (original description: Putative qcr7, Description = Cytochrome b-c1 complex subunit 7, PFAM = PF02271)' T '9.5' 'mitochondrial electron transport / ATP synthesis.cytochrome c reductase' 'niben101scf04134_175354-180533' '(at3g52730 : 114.0) ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein; FUNCTIONS IN: ubiquinol-cytochrome-c reductase activity; INVOLVED IN: mitochondrial electron transport, ubiquinol to cytochrome c; LOCATED IN: mitochondrial envelope, mitochondrion, mitochondrial respiratory chain complex III, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquinol-cytochrome C reductase, UQCRX/QCR9-like (InterPro:IPR008027); Has 75 Blast hits to 75 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 19; Plants - 51; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (p46270|ucr10_soltu : 108.0) Ubiquinol-cytochrome c reductase complex 8.0 kDa protein (EC 1.10.2.2) - Solanum tuberosum (Potato) & (gnl|cdd|38704 : 95.1) no description available & (reliability: 228.0) & (original description: Putative BnaA04g05280D, Description = Cytochrome b-c1 complex subunit 9, PFAM = PF05365)' T '9.5' 'mitochondrial electron transport / ATP synthesis.cytochrome c reductase' 'niben101scf04436_604581-610912' '(p46269|ucrq_soltu : 122.0) Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C (EC 1.10.2.2) (Ubiquinol-cytochrome c reductase complex 8.2 kDa protein) - Solanum tuberosum (Potato) & (at5g05370 : 115.0) Cytochrome b-c1 complex, subunit 8 protein; CONTAINS InterPro DOMAIN/s: Cytochrome b-c1 complex, subunit 8 (InterPro:IPR020101); BEST Arabidopsis thaliana protein match is: Cytochrome b-c1 complex, subunit 8 protein (TAIR:AT3G10860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative ucr3, Description = Cytochrome b-c1 complex subunit 8, PFAM = PF10890)' T '9.5' 'mitochondrial electron transport / ATP synthesis.cytochrome c reductase' 'niben101scf07635_3146-6096' '(atmg00220 : 709.0) Mitochondrial apocytochrome b (cob) gene encodes a subunit of the ubiquinol-cytochrome c oxidoreductase and is part of a 5 kb transcript. The transcript also contains a pseudogene for ribosomal protein S14 called RPS15 and a tRNA(Ser) gene. Both the Cob and RPS15 genes are edited in the transcript.; apocytochrome b (COB); FUNCTIONS IN: ubiquinol-cytochrome-c reductase activity; INVOLVED IN: aerobic respiration; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Cytochrome b/b6 (InterPro:IPR016175), Cytochrome b/b6, C-terminal (InterPro:IPR005798), Di-haem cytochrome, transmembrane (InterPro:IPR016174), Cytochrome b/b6, N-terminal (InterPro:IPR005797); BEST Arabidopsis thaliana protein match is: Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal (TAIR:AT2G07727.1). & (p05718|cyb_vicfa : 701.0) Cytochrome b - Vicia faba (Broad bean) & (gnl|cdd|31481 : 292.0) no description available & (gnl|cdd|39862 : 277.0) no description available & (reliability: 1418.0) & (original description: Putative cob, Description = Cytochrome b, PFAM = PF00032;PF00033)' T '9.5' 'mitochondrial electron transport / ATP synthesis.cytochrome c reductase' 'niben101scf08373_126673-135347' '(p46270|ucr10_soltu : 112.0) Ubiquinol-cytochrome c reductase complex 8.0 kDa protein (EC 1.10.2.2) - Solanum tuberosum (Potato) & (at3g52730 : 111.0) ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein; FUNCTIONS IN: ubiquinol-cytochrome-c reductase activity; INVOLVED IN: mitochondrial electron transport, ubiquinol to cytochrome c; LOCATED IN: mitochondrial envelope, mitochondrion, mitochondrial respiratory chain complex III, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquinol-cytochrome C reductase, UQCRX/QCR9-like (InterPro:IPR008027); Has 75 Blast hits to 75 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 19; Plants - 51; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|38704 : 90.1) no description available & (reliability: 222.0) & (original description: Putative BnaA04g05280D, Description = Cytochrome b-c1 complex subunit 9, PFAM = PF05365)' T '9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'nbv0.3scaffold15236_1560-8055' '(p25076|cy11_soltu : 498.0) Cytochrome c1, heme protein, mitochondrial precursor (Clone PC13III) - Solanum tuberosum (Potato) & (at5g40810 : 477.0) Cytochrome C1 family; FUNCTIONS IN: electron carrier activity, iron ion binding, heme binding, electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity; LOCATED IN: mitochondrion, mitochondrial respiratory chain, mitochondrial respiratory chain complex III; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c1 (InterPro:IPR002326), Cytochrome c1, transmembrane anchor, C-terminal (InterPro:IPR021157), Cytochrome c domain (InterPro:IPR009056); BEST Arabidopsis thaliana protein match is: Cytochrome C1 family (TAIR:AT3G27240.1); Has 3544 Blast hits to 3544 proteins in 780 species: Archae - 0; Bacteria - 1175; Metazoa - 215; Fungi - 208; Plants - 106; Viruses - 0; Other Eukaryotes - 1840 (source: NCBI BLink). & (gnl|cdd|38262 : 457.0) no description available & (gnl|cdd|65908 : 368.0) no description available & (reliability: 954.0) & (original description: Putative CYCL, Description = Cytochrome c1-2, heme protein, mitochondrial, PFAM = PF02167)' T '9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'nbv0.3scaffold18025_6657-9499' '(at3g51790 : 258.0) putative transmembrane protein G1p (AtG1) mRNA, complete; transmembrane protein G1P-related 1 (TG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome complex assembly, protein-heme linkage; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CcmE/CycJ protein (InterPro:IPR004329), Nucleic acid-binding, OB-fold (InterPro:IPR012340); Has 3203 Blast hits to 3203 proteins in 811 species: Archae - 0; Bacteria - 1840; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 1341 (source: NCBI BLink). & (gnl|cdd|32483 : 112.0) no description available & (reliability: 516.0) & (original description: Putative AtG1, Description = At3g51790, PFAM = PF03100)' T '9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'nbv0.3scaffold22505_12621-18694' '(at1g49380 : 720.0) cytochrome c biogenesis protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome complex assembly; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ResB-like (InterPro:IPR007816); Has 1416 Blast hits to 1414 proteins in 516 species: Archae - 0; Bacteria - 1016; Metazoa - 2; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink). & (gnl|cdd|86796 : 403.0) no description available & (reliability: 1440.0) & (original description: Putative ccs1, Description = Cytochrome c biogenesis protein, PFAM = PF05140;PF05140)' T '9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'nbv0.3scaffold34717_1-3790' '(p00052|cyc_phaau : 195.0) Cytochrome c - Phaseolus aureus (Mung bean) (Vigna radiata) & (at4g10040 : 190.0) Encodes cytochrome c. Promoter directs preferential expression in vascular tissues of cotyledons, leaves, roots, and hypocotyls, and in anthers.; cytochrome c-2 (CYTC-2); CONTAINS InterPro DOMAIN/s: Cytochrome c, class IA/ IB (InterPro:IPR002327), Cytochrome c, class I (InterPro:IPR003088), Cytochrome c domain (InterPro:IPR009056); BEST Arabidopsis thaliana protein match is: CYTOCHROME C-1 (TAIR:AT1G22840.1); Has 4050 Blast hits to 4028 proteins in 748 species: Archae - 0; Bacteria - 1493; Metazoa - 643; Fungi - 252; Plants - 160; Viruses - 0; Other Eukaryotes - 1502 (source: NCBI BLink). & (gnl|cdd|38663 : 152.0) no description available & (gnl|cdd|33277 : 128.0) no description available & (reliability: 380.0) & (original description: Putative CYTC1, Description = Cytochrome c, PFAM = PF00034)' T '9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'nbv0.5scaffold113_424624-429247' '(p00057|cyc_ricco : 175.0) Cytochrome c - Ricinus communis (Castor bean) & (at4g10040 : 174.0) Encodes cytochrome c. Promoter directs preferential expression in vascular tissues of cotyledons, leaves, roots, and hypocotyls, and in anthers.; cytochrome c-2 (CYTC-2); CONTAINS InterPro DOMAIN/s: Cytochrome c, class IA/ IB (InterPro:IPR002327), Cytochrome c, class I (InterPro:IPR003088), Cytochrome c domain (InterPro:IPR009056); BEST Arabidopsis thaliana protein match is: CYTOCHROME C-1 (TAIR:AT1G22840.1); Has 4050 Blast hits to 4028 proteins in 748 species: Archae - 0; Bacteria - 1493; Metazoa - 643; Fungi - 252; Plants - 160; Viruses - 0; Other Eukaryotes - 1502 (source: NCBI BLink). & (gnl|cdd|38663 : 135.0) no description available & (gnl|cdd|33277 : 112.0) no description available & (reliability: 348.0) & (original description: Putative cyc, Description = Cytochrome c, PFAM = PF00034)' T '9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'nbv0.5scaffold7299_22765-54192' '(q04647|ccbs_dauca : 208.0) Probable cytochrome c biosynthesis protein - Daucus carota (Carrot) & (atmg00830 : 181.0) cytochrome c biogenesis orf382; cytochrome C biogenesis 382 (CCB382); FUNCTIONS IN: heme transporter activity; INVOLVED IN: cytochrome complex assembly, respiratory chain complex IV assembly, protein complex assembly, heme transport; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Cytochrome c-type biogenesis protein (InterPro:IPR003567), Cytochrome c assembly protein (InterPro:IPR002541), Cytochrome c-type biogenesis protein CcbS (InterPro:IPR003569). & (reliability: 362.0) & (original description: Putative yejR, Description = Cytochrome c biogenesis FN, PFAM = )' T '9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben044scf00006967ctg013_8620-11921' '(q04647|ccbs_dauca : 758.0) Probable cytochrome c biosynthesis protein - Daucus carota (Carrot) & (atmg00830 : 552.0) cytochrome c biogenesis orf382; cytochrome C biogenesis 382 (CCB382); FUNCTIONS IN: heme transporter activity; INVOLVED IN: cytochrome complex assembly, respiratory chain complex IV assembly, protein complex assembly, heme transport; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Cytochrome c-type biogenesis protein (InterPro:IPR003567), Cytochrome c assembly protein (InterPro:IPR002541), Cytochrome c-type biogenesis protein CcbS (InterPro:IPR003569). & (reliability: 1104.0) & (original description: Putative CCMFN1, Description = Cytochrome c biogenesis CcmF N-terminal-like mitochondrial protein 1, PFAM = PF01578)' T '9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf00123_432064-446990' '(p25076|cy11_soltu : 595.0) Cytochrome c1, heme protein, mitochondrial precursor (Clone PC13III) - Solanum tuberosum (Potato) & (at5g40810 : 464.0) Cytochrome C1 family; FUNCTIONS IN: electron carrier activity, iron ion binding, heme binding, electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity; LOCATED IN: mitochondrion, mitochondrial respiratory chain, mitochondrial respiratory chain complex III; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c1 (InterPro:IPR002326), Cytochrome c1, transmembrane anchor, C-terminal (InterPro:IPR021157), Cytochrome c domain (InterPro:IPR009056); BEST Arabidopsis thaliana protein match is: Cytochrome C1 family (TAIR:AT3G27240.1); Has 3544 Blast hits to 3544 proteins in 780 species: Archae - 0; Bacteria - 1175; Metazoa - 215; Fungi - 208; Plants - 106; Viruses - 0; Other Eukaryotes - 1840 (source: NCBI BLink). & (gnl|cdd|38262 : 459.0) no description available & (gnl|cdd|65908 : 372.0) no description available & (reliability: 928.0) & (original description: Putative CYCL, Description = Cytochrome c1-2, heme protein, mitochondrial, PFAM = PF02167)' T '9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf00321_521403-527472' '(at1g49380 : 748.0) cytochrome c biogenesis protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome complex assembly; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ResB-like (InterPro:IPR007816); Has 1416 Blast hits to 1414 proteins in 516 species: Archae - 0; Bacteria - 1016; Metazoa - 2; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink). & (gnl|cdd|86796 : 411.0) no description available & (reliability: 1496.0) & (original description: Putative ccs1, Description = Cytochrome c biogenesis protein, PFAM = PF05140;PF05140)' T '9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf00901_740062-747095' '(p25076|cy11_soltu : 562.0) Cytochrome c1, heme protein, mitochondrial precursor (Clone PC13III) - Solanum tuberosum (Potato) & (at5g40810 : 468.0) Cytochrome C1 family; FUNCTIONS IN: electron carrier activity, iron ion binding, heme binding, electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity; LOCATED IN: mitochondrion, mitochondrial respiratory chain, mitochondrial respiratory chain complex III; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c1 (InterPro:IPR002326), Cytochrome c1, transmembrane anchor, C-terminal (InterPro:IPR021157), Cytochrome c domain (InterPro:IPR009056); BEST Arabidopsis thaliana protein match is: Cytochrome C1 family (TAIR:AT3G27240.1); Has 3544 Blast hits to 3544 proteins in 780 species: Archae - 0; Bacteria - 1175; Metazoa - 215; Fungi - 208; Plants - 106; Viruses - 0; Other Eukaryotes - 1840 (source: NCBI BLink). & (gnl|cdd|38262 : 454.0) no description available & (gnl|cdd|65908 : 369.0) no description available & (reliability: 936.0) & (original description: Putative CYCL, Description = Cytochrome c1-2, heme protein, mitochondrial, PFAM = PF02167)' T '9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf01582_257183-261330' '(atmg00180 : 646.0) cytochrome c biogenesis orf452; cytochrome C biogenesis 452 (CCB452); LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G07815.1). & (p38451|ymf02_marpo : 214.0) Hypothetical 37.0 kDa protein in RPS2 3'region (ORF 322) - Marchantia polymorpha (Liverwort) & (reliability: 1292.0) & (original description: Putative CCMFC, Description = Cytochrome c biogenesis CcmF C-terminal-like mitochondrial protein, PFAM = PF16327)' T '9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf01623_922608-974093' '(q04647|ccbs_dauca : 210.0) Probable cytochrome c biosynthesis protein - Daucus carota (Carrot) & (atmg00830 : 182.0) cytochrome c biogenesis orf382; cytochrome C biogenesis 382 (CCB382); FUNCTIONS IN: heme transporter activity; INVOLVED IN: cytochrome complex assembly, respiratory chain complex IV assembly, protein complex assembly, heme transport; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Cytochrome c-type biogenesis protein (InterPro:IPR003567), Cytochrome c assembly protein (InterPro:IPR002541), Cytochrome c-type biogenesis protein CcbS (InterPro:IPR003569). & (reliability: 364.0) & (original description: Putative yejR, Description = Cytochrome c biogenesis FN, PFAM = PF01578)' T '9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf01623_971452-973934' '(q04647|ccbs_dauca : 278.0) Probable cytochrome c biosynthesis protein - Daucus carota (Carrot) & (atmg00960 : 192.0) Encodes a protein of the mitochondrial membrane which has been shown to be present in a number of unidentified complexes including a 500-KDa complex postulated to have heme lyase activity, in which another protein (AtCCMH, AT1G15220) is also involved. cytochrome c biogenesis orf203.; CCB203; FUNCTIONS IN: heme transporter activity; INVOLVED IN: cytochrome complex assembly, respiratory chain complex IV assembly, protein complex assembly, heme transport; LOCATED IN: mitochondrial inner membrane, protein complex; CONTAINS InterPro DOMAIN/s: Cytochrome c-type biogenesis protein (InterPro:IPR003567), Cytochrome c assembly protein (InterPro:IPR002541), Cytochrome c-type biogenesis protein CcbS (InterPro:IPR003569); BEST Arabidopsis thaliana protein match is: Cytochrome C assembly protein (TAIR:AT2G07768.1). & (reliability: 384.0) & (original description: Putative ccmF, Description = Cytochrome c-type biogenesis protein CcmF, PFAM = PF01578)' T '9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf01749_140448-143290' '(at3g51790 : 257.0) putative transmembrane protein G1p (AtG1) mRNA, complete; transmembrane protein G1P-related 1 (TG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome complex assembly, protein-heme linkage; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CcmE/CycJ protein (InterPro:IPR004329), Nucleic acid-binding, OB-fold (InterPro:IPR012340); Has 3203 Blast hits to 3203 proteins in 811 species: Archae - 0; Bacteria - 1840; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 1341 (source: NCBI BLink). & (gnl|cdd|32483 : 112.0) no description available & (reliability: 514.0) & (original description: Putative AtG1, Description = At3g51790, PFAM = PF03100)' T '9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf02182_1922022-1925811' '(p00052|cyc_phaau : 182.0) Cytochrome c - Phaseolus aureus (Mung bean) (Vigna radiata) & (at4g10040 : 179.0) Encodes cytochrome c. Promoter directs preferential expression in vascular tissues of cotyledons, leaves, roots, and hypocotyls, and in anthers.; cytochrome c-2 (CYTC-2); CONTAINS InterPro DOMAIN/s: Cytochrome c, class IA/ IB (InterPro:IPR002327), Cytochrome c, class I (InterPro:IPR003088), Cytochrome c domain (InterPro:IPR009056); BEST Arabidopsis thaliana protein match is: CYTOCHROME C-1 (TAIR:AT1G22840.1); Has 4050 Blast hits to 4028 proteins in 748 species: Archae - 0; Bacteria - 1493; Metazoa - 643; Fungi - 252; Plants - 160; Viruses - 0; Other Eukaryotes - 1502 (source: NCBI BLink). & (gnl|cdd|38663 : 153.0) no description available & (gnl|cdd|33277 : 129.0) no description available & (reliability: 358.0) & (original description: Putative cyc, Description = Cytochrome c, PFAM = PF00034)' T '9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf03422_517073-519714' '(at1g15220 : 132.0) Encodes a protein with oxidoreductase activity present in the inner membrane of mitochondria. CCMH is postulated to play a central role in mitochondrial cytochrome c maturation, probably as part of a heme lyase complex that also holds activity of reducing apocytochrome c. CCMH interacts with apocytochrome AtCYTc-a and is shown to be present in a 500 kDa-complex along with CcmFN2.; CCMH; CONTAINS InterPro DOMAIN/s: Cytochrome C biogenesis protein CcmH (InterPro:IPR005616); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative CCMH, Description = Cytochrome c-type biogenesis CcmH-like mitochondrial protein, PFAM = PF03918)' T '9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf03600_312158-319624' '(p25076|cy11_soltu : 498.0) Cytochrome c1, heme protein, mitochondrial precursor (Clone PC13III) - Solanum tuberosum (Potato) & (at5g40810 : 477.0) Cytochrome C1 family; FUNCTIONS IN: electron carrier activity, iron ion binding, heme binding, electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity; LOCATED IN: mitochondrion, mitochondrial respiratory chain, mitochondrial respiratory chain complex III; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c1 (InterPro:IPR002326), Cytochrome c1, transmembrane anchor, C-terminal (InterPro:IPR021157), Cytochrome c domain (InterPro:IPR009056); BEST Arabidopsis thaliana protein match is: Cytochrome C1 family (TAIR:AT3G27240.1); Has 3544 Blast hits to 3544 proteins in 780 species: Archae - 0; Bacteria - 1175; Metazoa - 215; Fungi - 208; Plants - 106; Viruses - 0; Other Eukaryotes - 1840 (source: NCBI BLink). & (gnl|cdd|38262 : 458.0) no description available & (gnl|cdd|65908 : 368.0) no description available & (reliability: 954.0) & (original description: Putative CYCL, Description = Cytochrome c1-2, heme protein, mitochondrial, PFAM = PF02167)' T '9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf06646_41702-47638' '(at1g15220 : 206.0) Encodes a protein with oxidoreductase activity present in the inner membrane of mitochondria. CCMH is postulated to play a central role in mitochondrial cytochrome c maturation, probably as part of a heme lyase complex that also holds activity of reducing apocytochrome c. CCMH interacts with apocytochrome AtCYTc-a and is shown to be present in a 500 kDa-complex along with CcmFN2.; CCMH; CONTAINS InterPro DOMAIN/s: Cytochrome C biogenesis protein CcmH (InterPro:IPR005616); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|32902 : 93.5) no description available & (reliability: 412.0) & (original description: Putative CCMH, Description = Cytochrome c-type biogenesis CcmH-like mitochondrial protein, PFAM = PF03918)' T '9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf09710_6435-9052' '(atmg00110 : 293.0) Encodes a mitochondria-encoded cytochrome c biogenesis protein.; cytochrome C biogenesis 206 (CCB206); FUNCTIONS IN: heme transporter activity; INVOLVED IN: cytochrome complex assembly, heme transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c-type biogenesis protein CcmB (InterPro:IPR003544). & (p38454|ccmb_marpo : 169.0) Putative cytochrome c biogenesis ccmB-like mitochondrial protein (ORF 277) - Marchantia polymorpha (Liverwort) & (gnl|cdd|67017 : 90.6) no description available & (reliability: 586.0) & (original description: Putative ccmB, Description = Cytochrome c biogenesis B, PFAM = )' T '9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf10575_45432-51484' '(at1g49380 : 378.0) cytochrome c biogenesis protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome complex assembly; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ResB-like (InterPro:IPR007816); Has 1416 Blast hits to 1414 proteins in 516 species: Archae - 0; Bacteria - 1016; Metazoa - 2; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink). & (gnl|cdd|86796 : 166.0) no description available & (reliability: 756.0) & (original description: Putative ccs1, Description = Cytochrome c biogenesis protein, PFAM = PF05140)' T '9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'niben101scf21408_69272-75988' '(p00055|cyc_orysa : 197.0) Cytochrome c - Oryza sativa (Rice) & (at4g10040 : 193.0) Encodes cytochrome c. Promoter directs preferential expression in vascular tissues of cotyledons, leaves, roots, and hypocotyls, and in anthers.; cytochrome c-2 (CYTC-2); CONTAINS InterPro DOMAIN/s: Cytochrome c, class IA/ IB (InterPro:IPR002327), Cytochrome c, class I (InterPro:IPR003088), Cytochrome c domain (InterPro:IPR009056); BEST Arabidopsis thaliana protein match is: CYTOCHROME C-1 (TAIR:AT1G22840.1); Has 4050 Blast hits to 4028 proteins in 748 species: Archae - 0; Bacteria - 1493; Metazoa - 643; Fungi - 252; Plants - 160; Viruses - 0; Other Eukaryotes - 1502 (source: NCBI BLink). & (gnl|cdd|38663 : 152.0) no description available & (gnl|cdd|33277 : 133.0) no description available & (reliability: 386.0) & (original description: Putative cyc, Description = Cytochrome c, PFAM = PF00034)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.3scaffold802_3549-10145' '(at1g22450 : 139.0) subunit 6b of cytochrome c oxidase; cytochrome C oxidase 6B (COX6B); FUNCTIONS IN: cytochrome-c oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, response to salt stress; LOCATED IN: thylakoid, mitochondrion, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIb (InterPro:IPR003213); BEST Arabidopsis thaliana protein match is: Cytochrome c oxidase, subunit Vib family protein (TAIR:AT4G28060.1); Has 8194 Blast hits to 4240 proteins in 603 species: Archae - 36; Bacteria - 1026; Metazoa - 1662; Fungi - 831; Plants - 315; Viruses - 124; Other Eukaryotes - 4200 (source: NCBI BLink). & (gnl|cdd|38267 : 126.0) no description available & (gnl|cdd|58650 : 122.0) no description available & (reliability: 278.0) & (original description: Putative cox12, Description = Cytochrome c oxidase subunit 6b-1, PFAM = PF02297)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.3scaffold4065_41054-54078' '(at3g08950 : 365.0) Encodes HCC1, homologue of the copper chaperone SCO1 (synthesis of cytochrome c oxidase 1) from the yeast Saccharomyces cerevisiae. SCO1 encodes a mitochondrial protein that is essential for the correct assembly of complex IV in the respiratory chain. HCC1 is localized in the mitochondrion. A chimeric yeast Sco1-Arabidopsis HCC1 protein complements yeast Sco1 activity. Embryos of hcc1 mutants became arrested at various developmental stages, mostly at the heart stage.; electron transport SCO1/SenC family protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: copper ion transport, respiratory chain complex IV assembly, cellular copper ion homeostasis, cell redox homeostasis; LOCATED IN: mitochondrion, mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Synthesis of cytochrome c oxidase, Sco1/Sco2 (InterPro:IPR017276), Copper chaperone SCO1/SenC (InterPro:IPR003782), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G39740.1); Has 4072 Blast hits to 4072 proteins in 1098 species: Archae - 11; Bacteria - 2439; Metazoa - 165; Fungi - 147; Plants - 84; Viruses - 0; Other Eukaryotes - 1226 (source: NCBI BLink). & (gnl|cdd|38003 : 304.0) no description available & (gnl|cdd|48517 : 207.0) no description available & (reliability: 730.0) & (original description: Putative SCO1, Description = Putative SCO1 protein, PFAM = PF02630)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.3scaffold4866_61510-66433' '(at4g37830 : 114.0) cytochrome c oxidase-related; FUNCTIONS IN: cytochrome-c oxidase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIa (InterPro:IPR001349); Has 37 Blast hits to 37 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative COX6A, Description = Cytochrome c oxidase subunit 6a, mitochondrial, PFAM = PF02046)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.3scaffold15232_9792-15498' '(at4g28060 : 132.0) Cytochrome c oxidase, subunit Vib family protein; FUNCTIONS IN: cytochrome-c oxidase activity; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIb (InterPro:IPR003213); BEST Arabidopsis thaliana protein match is: Cytochrome c oxidase, subunit Vib family protein (TAIR:AT5G57815.1); Has 578 Blast hits to 578 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 306; Fungi - 118; Plants - 134; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|38267 : 127.0) no description available & (gnl|cdd|58650 : 123.0) no description available & (reliability: 264.0) & (original description: Putative cox12, Description = Cytochrome c oxidase subunit VIb, PFAM = PF02297)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.3scaffold43471_627-10260' '(at1g57600 : 635.0) MBOAT (membrane bound O-acyl transferase) family protein; CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); Has 2343 Blast hits to 2336 proteins in 775 species: Archae - 0; Bacteria - 1642; Metazoa - 209; Fungi - 146; Plants - 49; Viruses - 0; Other Eukaryotes - 297 (source: NCBI BLink). & (gnl|cdd|39064 : 247.0) no description available & (gnl|cdd|31882 : 99.0) no description available & (reliability: 1270.0) & (original description: Putative At1g57600, Description = MBOAT (Membrane bound O-acyl transferase)-like protein, PFAM = PF03062)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.3scaffold55223_1-8927' '(at1g22450 : 132.0) subunit 6b of cytochrome c oxidase; cytochrome C oxidase 6B (COX6B); FUNCTIONS IN: cytochrome-c oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, response to salt stress; LOCATED IN: thylakoid, mitochondrion, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIb (InterPro:IPR003213); BEST Arabidopsis thaliana protein match is: Cytochrome c oxidase, subunit Vib family protein (TAIR:AT4G28060.1); Has 8194 Blast hits to 4240 proteins in 603 species: Archae - 36; Bacteria - 1026; Metazoa - 1662; Fungi - 831; Plants - 315; Viruses - 124; Other Eukaryotes - 4200 (source: NCBI BLink). & (gnl|cdd|38267 : 124.0) no description available & (gnl|cdd|58650 : 122.0) no description available & (reliability: 264.0) & (original description: Putative cox12, Description = Cytochrome c oxidase subunit 6b-1, PFAM = PF02297)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.3scaffold109888_1-2634' '(atmg00160 : 225.0) cytochrome c oxidase subunit 2; cytochrome oxidase 2 (COX2); FUNCTIONS IN: cytochrome-c oxidase activity; INVOLVED IN: respiratory electron transport chain; LOCATED IN: mitochondrion, chloroplast, mitochondrial respiratory chain complex IV; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome C oxidase subunit II-like, transmembrane domain (InterPro:IPR015964), Cytochrome c oxidase subunit II C-terminal (InterPro:IPR002429), Cupredoxin (InterPro:IPR008972), Cytochrome c oxidase, subunit II (InterPro:IPR014222), Cytochrome C oxidase subunit II, transmembrane domain (InterPro:IPR011759); BEST Arabidopsis thaliana protein match is: Cytochrome C oxidase subunit II-like, transmembrane domain (TAIR:ATMG01280.1). & (p98012|cox2_betvu : 224.0) Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II) - Beta vulgaris (Sugar beet) & (gnl|cdd|39964 : 158.0) no description available & (gnl|cdd|66473 : 86.7) no description available & (reliability: 450.0) & (original description: Putative cox2, Description = Cytochrome oxidase subunit II, PFAM = PF00252;PF02790)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.3scaffold143406_1-1218' '(at1g80230 : 84.3) Rubredoxin-like superfamily protein; FUNCTIONS IN: cytochrome-c oxidase activity; LOCATED IN: mitochondrial envelope, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit Vb (InterPro:IPR002124); BEST Arabidopsis thaliana protein match is: Rubredoxin-like superfamily protein (TAIR:AT3G15640.1); Has 455 Blast hits to 455 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 230; Fungi - 89; Plants - 94; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative cox5b, Description = Cytochrome c oxidase subunit Vb, PFAM = )' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.5scaffold90_592250-608120' '(at1g57600 : 711.0) MBOAT (membrane bound O-acyl transferase) family protein; CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); Has 2343 Blast hits to 2336 proteins in 775 species: Archae - 0; Bacteria - 1642; Metazoa - 209; Fungi - 146; Plants - 49; Viruses - 0; Other Eukaryotes - 297 (source: NCBI BLink). & (gnl|cdd|39064 : 283.0) no description available & (gnl|cdd|86224 : 97.1) no description available & (reliability: 1422.0) & (original description: Putative At1g57600, Description = MBOAT (Membrane bound O-acyl transferase)-like protein, PFAM = PF03062)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.5scaffold310_238581-241799' '(at3g15640 : 114.0) Rubredoxin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit Vb (InterPro:IPR002124); BEST Arabidopsis thaliana protein match is: Rubredoxin-like superfamily protein (TAIR:AT1G80230.1); Has 464 Blast hits to 464 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 230; Fungi - 86; Plants - 102; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|38562 : 90.5) no description available & (reliability: 228.0) & (original description: Putative cox5b, Description = Cytochrome c oxidase subunit Vb, PFAM = PF01215)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.5scaffold1107_46747-65913' '(at1g80230 : 125.0) Rubredoxin-like superfamily protein; FUNCTIONS IN: cytochrome-c oxidase activity; LOCATED IN: mitochondrial envelope, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit Vb (InterPro:IPR002124); BEST Arabidopsis thaliana protein match is: Rubredoxin-like superfamily protein (TAIR:AT3G15640.1); Has 455 Blast hits to 455 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 230; Fungi - 89; Plants - 94; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|38562 : 103.0) no description available & (gnl|cdd|28837 : 99.5) no description available & (reliability: 250.0) & (original description: Putative CytC5b, Description = Cytochrome c oxidase subunit 5B, PFAM = PF01215)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.5scaffold1787_329951-335138' '(at4g39740 : 246.0) Thioredoxin superfamily protein; CONTAINS InterPro DOMAIN/s: Copper chaperone SCO1/SenC (InterPro:IPR003782), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: electron transport SCO1/SenC family protein (TAIR:AT3G08950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38003 : 223.0) no description available & (gnl|cdd|48517 : 170.0) no description available & (reliability: 492.0) & (original description: Putative HCC2, Description = Putative electon transport protein SCO1/SCO2, PFAM = PF02630)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.5scaffold3730_91899-99471' '(at1g80230 : 186.0) Rubredoxin-like superfamily protein; FUNCTIONS IN: cytochrome-c oxidase activity; LOCATED IN: mitochondrial envelope, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit Vb (InterPro:IPR002124); BEST Arabidopsis thaliana protein match is: Rubredoxin-like superfamily protein (TAIR:AT3G15640.1); Has 455 Blast hits to 455 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 230; Fungi - 89; Plants - 94; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|38562 : 141.0) no description available & (gnl|cdd|28837 : 121.0) no description available & (reliability: 372.0) & (original description: Putative cox5b, Description = Cytochrome c oxidase subunit Vb, PFAM = PF01215)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.5scaffold4558_21832-27496' '(at4g39740 : 239.0) Thioredoxin superfamily protein; CONTAINS InterPro DOMAIN/s: Copper chaperone SCO1/SenC (InterPro:IPR003782), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: electron transport SCO1/SenC family protein (TAIR:AT3G08950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38003 : 215.0) no description available & (gnl|cdd|48517 : 167.0) no description available & (reliability: 478.0) & (original description: Putative HCC2, Description = Putative electon transport protein SCO1/SCO2, PFAM = PF02630)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.5scaffold10363_2005-4799' '(p32808|cox3_helan : 447.0) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide III) - Helianthus annuus (Common sunflower) & (atmg00730 : 419.0) Encodes cytochrome c oxidase subunit 3.; cytochrome c oxidase subunit 3 (COX3); CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit III (InterPro:IPR000298); BEST Arabidopsis thaliana protein match is: Cytochrome c oxidase, subunit III (TAIR:AT2G07687.1). & (gnl|cdd|84823 : 370.0) no description available & (gnl|cdd|39863 : 338.0) no description available & (reliability: 838.0) & (original description: Putative COX3, Description = Cytochrome c oxidase subunit 3, PFAM = PF00510)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'nbv0.5scaffold10438_2372-5952' '(p07506|cox1_soybn : 903.0) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) - Glycine max (Soybean) & (atmg01360 : 884.0) cytochrome c oxidase subunit 1; cytochrome oxidase (COX1); CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit I bacterial type (InterPro:IPR014241), Cytochrome c oxidase, subunit I (InterPro:IPR000883). & (gnl|cdd|29934 : 818.0) no description available & (gnl|cdd|39966 : 249.0) no description available & (reliability: 1768.0) & (original description: Putative coxI, Description = Cytochrome c oxidase subunit 1, PFAM = PF00115)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben044scf00000524ctg000_10295-14004' '(p98012|cox2_betvu : 469.0) Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II) - Beta vulgaris (Sugar beet) & (atmg00160 : 464.0) cytochrome c oxidase subunit 2; cytochrome oxidase 2 (COX2); FUNCTIONS IN: cytochrome-c oxidase activity; INVOLVED IN: respiratory electron transport chain; LOCATED IN: mitochondrion, chloroplast, mitochondrial respiratory chain complex IV; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome C oxidase subunit II-like, transmembrane domain (InterPro:IPR015964), Cytochrome c oxidase subunit II C-terminal (InterPro:IPR002429), Cupredoxin (InterPro:IPR008972), Cytochrome c oxidase, subunit II (InterPro:IPR014222), Cytochrome C oxidase subunit II, transmembrane domain (InterPro:IPR011759); BEST Arabidopsis thaliana protein match is: Cytochrome C oxidase subunit II-like, transmembrane domain (TAIR:ATMG01280.1). & (gnl|cdd|39964 : 362.0) no description available & (gnl|cdd|84533 : 192.0) no description available & (reliability: 928.0) & (original description: Putative COX2, Description = Cytochrome c oxidase subunit 2, PFAM = PF02790;PF00116)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben044scf00013238ctg025_11549-25191' '(at3g08950 : 363.0) Encodes HCC1, homologue of the copper chaperone SCO1 (synthesis of cytochrome c oxidase 1) from the yeast Saccharomyces cerevisiae. SCO1 encodes a mitochondrial protein that is essential for the correct assembly of complex IV in the respiratory chain. HCC1 is localized in the mitochondrion. A chimeric yeast Sco1-Arabidopsis HCC1 protein complements yeast Sco1 activity. Embryos of hcc1 mutants became arrested at various developmental stages, mostly at the heart stage.; electron transport SCO1/SenC family protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: copper ion transport, respiratory chain complex IV assembly, cellular copper ion homeostasis, cell redox homeostasis; LOCATED IN: mitochondrion, mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Synthesis of cytochrome c oxidase, Sco1/Sco2 (InterPro:IPR017276), Copper chaperone SCO1/SenC (InterPro:IPR003782), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G39740.1); Has 4072 Blast hits to 4072 proteins in 1098 species: Archae - 11; Bacteria - 2439; Metazoa - 165; Fungi - 147; Plants - 84; Viruses - 0; Other Eukaryotes - 1226 (source: NCBI BLink). & (gnl|cdd|38003 : 303.0) no description available & (gnl|cdd|48517 : 207.0) no description available & (reliability: 726.0) & (original description: Putative HCC1, Description = Protein SCO1 homolog 1, mitochondrial, PFAM = PF02630)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf00123_648137-656389' '(at1g80230 : 182.0) Rubredoxin-like superfamily protein; FUNCTIONS IN: cytochrome-c oxidase activity; LOCATED IN: mitochondrial envelope, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit Vb (InterPro:IPR002124); BEST Arabidopsis thaliana protein match is: Rubredoxin-like superfamily protein (TAIR:AT3G15640.1); Has 455 Blast hits to 455 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 230; Fungi - 89; Plants - 94; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|38562 : 142.0) no description available & (gnl|cdd|28837 : 119.0) no description available & (reliability: 364.0) & (original description: Putative cox5b, Description = Cytochrome c oxidase subunit Vb, PFAM = PF01215)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf00149_576667-597742' '(at3g08950 : 365.0) Encodes HCC1, homologue of the copper chaperone SCO1 (synthesis of cytochrome c oxidase 1) from the yeast Saccharomyces cerevisiae. SCO1 encodes a mitochondrial protein that is essential for the correct assembly of complex IV in the respiratory chain. HCC1 is localized in the mitochondrion. A chimeric yeast Sco1-Arabidopsis HCC1 protein complements yeast Sco1 activity. Embryos of hcc1 mutants became arrested at various developmental stages, mostly at the heart stage.; electron transport SCO1/SenC family protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: copper ion transport, respiratory chain complex IV assembly, cellular copper ion homeostasis, cell redox homeostasis; LOCATED IN: mitochondrion, mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Synthesis of cytochrome c oxidase, Sco1/Sco2 (InterPro:IPR017276), Copper chaperone SCO1/SenC (InterPro:IPR003782), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G39740.1); Has 4072 Blast hits to 4072 proteins in 1098 species: Archae - 11; Bacteria - 2439; Metazoa - 165; Fungi - 147; Plants - 84; Viruses - 0; Other Eukaryotes - 1226 (source: NCBI BLink). & (gnl|cdd|38003 : 304.0) no description available & (gnl|cdd|48517 : 208.0) no description available & (reliability: 730.0) & (original description: Putative v1g79458, Description = Predicted protein, PFAM = PF02630)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf00702_89909-96159' '(at1g28140 : 325.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2301, transmembrane (InterPro:IPR019275); Has 140 Blast hits to 140 proteins in 72 species: Archae - 0; Bacteria - 86; Metazoa - 10; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|34972 : 109.0) no description available & (reliability: 650.0) & (original description: Putative CPL10, Description = Predicted protein, PFAM = PF10063)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf00901_650020-668619' '(at1g80230 : 184.0) Rubredoxin-like superfamily protein; FUNCTIONS IN: cytochrome-c oxidase activity; LOCATED IN: mitochondrial envelope, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit Vb (InterPro:IPR002124); BEST Arabidopsis thaliana protein match is: Rubredoxin-like superfamily protein (TAIR:AT3G15640.1); Has 455 Blast hits to 455 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 230; Fungi - 89; Plants - 94; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|38562 : 141.0) no description available & (gnl|cdd|28837 : 122.0) no description available & (reliability: 368.0) & (original description: Putative cox5b, Description = Cytochrome c oxidase subunit Vb, PFAM = PF01215)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf01353_231432-233620' '(q8vy39|cx5c2_helan : 100.0) Cytochrome c oxidase polypeptide Vc-2 (EC 1.9.3.1) (Cytochrome c oxidase subunit 5c-2) - Helianthus annuus (Common sunflower) & (gnl|cdd|69331 : 100.0) no description available & (at5g61310 : 97.8) Cytochrome c oxidase subunit Vc family protein; FUNCTIONS IN: cytochrome-c oxidase activity; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrial respiratory chain, endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase subunit Vc (InterPro:IPR008432); BEST Arabidopsis thaliana protein match is: Cytochrome c oxidase subunit Vc family protein (TAIR:AT2G47380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative COX5C, Description = Cytochrome c oxidase subunit 5C, PFAM = )' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf01825_545689-551939' '(at4g39740 : 263.0) Thioredoxin superfamily protein; CONTAINS InterPro DOMAIN/s: Copper chaperone SCO1/SenC (InterPro:IPR003782), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: electron transport SCO1/SenC family protein (TAIR:AT3G08950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38003 : 248.0) no description available & (gnl|cdd|48517 : 171.0) no description available & (reliability: 526.0) & (original description: Putative HCC2, Description = Protein SCO1 homolog 2, mitochondrial, PFAM = PF02630)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf01825_552229-545238' '(at4g39740 : 264.0) Thioredoxin superfamily protein; CONTAINS InterPro DOMAIN/s: Copper chaperone SCO1/SenC (InterPro:IPR003782), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: electron transport SCO1/SenC family protein (TAIR:AT3G08950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38003 : 248.0) no description available & (gnl|cdd|48517 : 171.0) no description available & (reliability: 528.0) & (original description: Putative HCC2, Description = Protein SCO1 homolog 2, mitochondrial, PFAM = PF02630)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf02160_605956-609766' '(p07506|cox1_soybn : 820.0) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) - Glycine max (Soybean) & (atmg01360 : 810.0) cytochrome c oxidase subunit 1; cytochrome oxidase (COX1); CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit I bacterial type (InterPro:IPR014241), Cytochrome c oxidase, subunit I (InterPro:IPR000883). & (gnl|cdd|29934 : 753.0) no description available & (gnl|cdd|39966 : 239.0) no description available & (reliability: 1620.0) & (original description: Putative coxI, Description = Cytochrome c oxidase subunit 1, PFAM = PF00115)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf02247_125861-133174' '(at3g17910 : 355.0) Surfeit 1 (SURF1) mRNA. Similar to human SURF1 which is known to be involved in cytochrome c oxidase assembly.; SURFEIT 1 (SURF1); CONTAINS InterPro DOMAIN/s: Surfeit locus 1 (InterPro:IPR002994); BEST Arabidopsis thaliana protein match is: Surfeit locus 1 cytochrome c oxidase biogenesis protein (TAIR:AT1G48510.1); Has 1714 Blast hits to 1712 proteins in 488 species: Archae - 0; Bacteria - 777; Metazoa - 126; Fungi - 127; Plants - 43; Viruses - 0; Other Eukaryotes - 641 (source: NCBI BLink). & (gnl|cdd|36776 : 179.0) no description available & (gnl|cdd|33155 : 121.0) no description available & (reliability: 710.0) & (original description: Putative SURF1, Description = Surfeit locus protein 1, PFAM = PF02104)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf02367_549345-555941' '(at1g22450 : 140.0) subunit 6b of cytochrome c oxidase; cytochrome C oxidase 6B (COX6B); FUNCTIONS IN: cytochrome-c oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, response to salt stress; LOCATED IN: thylakoid, mitochondrion, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIb (InterPro:IPR003213); BEST Arabidopsis thaliana protein match is: Cytochrome c oxidase, subunit Vib family protein (TAIR:AT4G28060.1); Has 8194 Blast hits to 4240 proteins in 603 species: Archae - 36; Bacteria - 1026; Metazoa - 1662; Fungi - 831; Plants - 315; Viruses - 124; Other Eukaryotes - 4200 (source: NCBI BLink). & (gnl|cdd|38267 : 129.0) no description available & (gnl|cdd|58650 : 121.0) no description available & (reliability: 280.0) & (original description: Putative cox12, Description = Cytochrome c oxidase subunit 6b-1, PFAM = PF02297)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf02537_206389-215623' '(at1g22450 : 131.0) subunit 6b of cytochrome c oxidase; cytochrome C oxidase 6B (COX6B); FUNCTIONS IN: cytochrome-c oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, response to salt stress; LOCATED IN: thylakoid, mitochondrion, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIb (InterPro:IPR003213); BEST Arabidopsis thaliana protein match is: Cytochrome c oxidase, subunit Vib family protein (TAIR:AT4G28060.1); Has 8194 Blast hits to 4240 proteins in 603 species: Archae - 36; Bacteria - 1026; Metazoa - 1662; Fungi - 831; Plants - 315; Viruses - 124; Other Eukaryotes - 4200 (source: NCBI BLink). & (gnl|cdd|38267 : 124.0) no description available & (gnl|cdd|58650 : 121.0) no description available & (reliability: 262.0) & (original description: Putative cox12, Description = Cytochrome c oxidase subunit 6b-1, PFAM = PF02297)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf02714_657142-673288' '(at1g57600 : 646.0) MBOAT (membrane bound O-acyl transferase) family protein; CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); Has 2343 Blast hits to 2336 proteins in 775 species: Archae - 0; Bacteria - 1642; Metazoa - 209; Fungi - 146; Plants - 49; Viruses - 0; Other Eukaryotes - 297 (source: NCBI BLink). & (gnl|cdd|39064 : 252.0) no description available & (gnl|cdd|31882 : 104.0) no description available & (reliability: 1292.0) & (original description: Putative At1g57600, Description = Putative membrane-bound O-acyltransferase C24H6.01c, PFAM = PF03062)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf03964_118668-131361' '(at1g22450 : 138.0) subunit 6b of cytochrome c oxidase; cytochrome C oxidase 6B (COX6B); FUNCTIONS IN: cytochrome-c oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, response to salt stress; LOCATED IN: thylakoid, mitochondrion, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIb (InterPro:IPR003213); BEST Arabidopsis thaliana protein match is: Cytochrome c oxidase, subunit Vib family protein (TAIR:AT4G28060.1); Has 8194 Blast hits to 4240 proteins in 603 species: Archae - 36; Bacteria - 1026; Metazoa - 1662; Fungi - 831; Plants - 315; Viruses - 124; Other Eukaryotes - 4200 (source: NCBI BLink). & (gnl|cdd|38267 : 120.0) no description available & (gnl|cdd|58650 : 108.0) no description available & (reliability: 276.0) & (original description: Putative cox6b1, Description = Cytochrome c oxidase subunit 6b-1, PFAM = PF02297)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf06569_192908-200217' '(at4g39740 : 259.0) Thioredoxin superfamily protein; CONTAINS InterPro DOMAIN/s: Copper chaperone SCO1/SenC (InterPro:IPR003782), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: electron transport SCO1/SenC family protein (TAIR:AT3G08950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38003 : 244.0) no description available & (gnl|cdd|48517 : 169.0) no description available & (reliability: 518.0) & (original description: Putative HCC2, Description = Protein SCO1 homolog 2, mitochondrial, PFAM = PF02630)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf06864_18967-23472' '(gnl|cdd|69331 : 110.0) no description available & (p19173|cox5c_ipoba : 87.8) Cytochrome c oxidase polypeptide Vc (EC 1.9.3.1) (Cytochrome c oxidase subunit 5c) - Ipomoea batatas (Sweet potato) (Batate) & (at5g40382 : 80.5) Cytochrome c oxidase subunit Vc family protein; FUNCTIONS IN: cytochrome-c oxidase activity; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrial respiratory chain, endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase subunit Vc (InterPro:IPR008432); BEST Arabidopsis thaliana protein match is: Cytochrome c oxidase subunit Vc family protein (TAIR:AT5G61310.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative COX5C, Description = Cytochrome c oxidase subunit 5C, PFAM = )' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf06969_146474-150659' '(at1g66590 : 118.0) cytochrome c oxidase 19-1 (COX19-1); CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); BEST Arabidopsis thaliana protein match is: cytochrome c oxidase 19-2 (TAIR:AT1G69750.1); Has 290 Blast hits to 290 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 77; Fungi - 106; Plants - 52; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|38687 : 92.5) no description available & (reliability: 236.0) & (original description: Putative PHYPADRAFT_154024, Description = Predicted protein, PFAM = PF06747)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf07008_35689-41845' '(at1g66590 : 138.0) cytochrome c oxidase 19-1 (COX19-1); CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); BEST Arabidopsis thaliana protein match is: cytochrome c oxidase 19-2 (TAIR:AT1G69750.1); Has 290 Blast hits to 290 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 77; Fungi - 106; Plants - 52; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|38687 : 107.0) no description available & (reliability: 276.0) & (original description: Putative Sb09g028140, Description = Putative uncharacterized protein Sb09g028140, PFAM = PF06747)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf07616_47606-58525' '(at1g02410 : 332.0) cytochrome c oxidase assembly protein CtaG / Cox11 family; FUNCTIONS IN: copper ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase assembly protein CtaG/Cox11 (InterPro:IPR007533); Has 2749 Blast hits to 2749 proteins in 659 species: Archae - 0; Bacteria - 997; Metazoa - 98; Fungi - 130; Plants - 41; Viruses - 0; Other Eukaryotes - 1483 (source: NCBI BLink). & (gnl|cdd|37751 : 295.0) no description available & (gnl|cdd|68031 : 249.0) no description available & (reliability: 664.0) & (original description: Putative CTAG, Description = Cytochrome c oxidase assembly protein ctaG, PFAM = PF04442)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf09028_21131-26988' '(at3g17910 : 364.0) Surfeit 1 (SURF1) mRNA. Similar to human SURF1 which is known to be involved in cytochrome c oxidase assembly.; SURFEIT 1 (SURF1); CONTAINS InterPro DOMAIN/s: Surfeit locus 1 (InterPro:IPR002994); BEST Arabidopsis thaliana protein match is: Surfeit locus 1 cytochrome c oxidase biogenesis protein (TAIR:AT1G48510.1); Has 1714 Blast hits to 1712 proteins in 488 species: Archae - 0; Bacteria - 777; Metazoa - 126; Fungi - 127; Plants - 43; Viruses - 0; Other Eukaryotes - 641 (source: NCBI BLink). & (gnl|cdd|36776 : 181.0) no description available & (gnl|cdd|33155 : 126.0) no description available & (reliability: 728.0) & (original description: Putative SURF1, Description = Surfeit locus protein 1, PFAM = PF02104)' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf10132_61561-63752' '(p19173|cox5c_ipoba : 107.0) Cytochrome c oxidase polypeptide Vc (EC 1.9.3.1) (Cytochrome c oxidase subunit 5c) - Ipomoea batatas (Sweet potato) (Batate) & (gnl|cdd|69331 : 105.0) no description available & (at5g40382 : 97.4) Cytochrome c oxidase subunit Vc family protein; FUNCTIONS IN: cytochrome-c oxidase activity; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrial respiratory chain, endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase subunit Vc (InterPro:IPR008432); BEST Arabidopsis thaliana protein match is: Cytochrome c oxidase subunit Vc family protein (TAIR:AT5G61310.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 194.8) & (original description: Putative COX5C, Description = Cytochrome c oxidase subunit 5C, PFAM = )' T '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'niben101scf10694_1320-4300' '(atmg00160 : 226.0) cytochrome c oxidase subunit 2; cytochrome oxidase 2 (COX2); FUNCTIONS IN: cytochrome-c oxidase activity; INVOLVED IN: respiratory electron transport chain; LOCATED IN: mitochondrion, chloroplast, mitochondrial respiratory chain complex IV; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome C oxidase subunit II-like, transmembrane domain (InterPro:IPR015964), Cytochrome c oxidase subunit II C-terminal (InterPro:IPR002429), Cupredoxin (InterPro:IPR008972), Cytochrome c oxidase, subunit II (InterPro:IPR014222), Cytochrome C oxidase subunit II, transmembrane domain (InterPro:IPR011759); BEST Arabidopsis thaliana protein match is: Cytochrome C oxidase subunit II-like, transmembrane domain (TAIR:ATMG01280.1). & (p98012|cox2_betvu : 225.0) Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II) - Beta vulgaris (Sugar beet) & (gnl|cdd|39964 : 156.0) no description available & (gnl|cdd|66473 : 85.5) no description available & (reliability: 452.0) & (original description: Putative cox2, Description = Cytochrome oxidase subunit II, PFAM = PF02790;PF00252)' T '9.8' 'mitochondrial electron transport / ATP synthesis.uncoupling protein' 'niben101scf01209_29753-37246' '(at3g54110 : 496.0) Member of Uncoupling protein PUMP2 family. Encodes a mitochondrial uncoupling protein AtUCP1 involved in maintain the redox poise of the mitochondrial electron transport chain to facilitate photosynthetic metabolism. Disruption of UCP1 results in a photosynthetic phenotype. Specifically there is a restriction in photorespiration with a decrease in the rate of oxidation of photorespiratory glycine in the mitochondrion. This change leads to an associated reduced photosynthetic carbon assimilation rate.; plant uncoupling mitochondrial protein 1 (PUMP1); FUNCTIONS IN: oxidative phosphorylation uncoupler activity, binding; INVOLVED IN: transport, photosynthesis, photorespiration; LOCATED IN: mitochondrion, mitochondrial inner membrane, plasma membrane, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial brown fat uncoupling protein (InterPro:IPR002030), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: uncoupling protein 2 (TAIR:AT5G58970.1); Has 26567 Blast hits to 13376 proteins in 459 species: Archae - 0; Bacteria - 2; Metazoa - 11203; Fungi - 7876; Plants - 4909; Viruses - 3; Other Eukaryotes - 2574 (source: NCBI BLink). & (gnl|cdd|35972 : 387.0) no description available & (gnl|cdd|84566 : 85.3) no description available & (reliability: 992.0) & (original description: Putative PUMP1, Description = Mitochondrial uncoupling protein 1, PFAM = PF00153;PF00153;PF00153)' T '9.8' 'mitochondrial electron transport / ATP synthesis.uncoupling protein' 'niben101scf07399_115187-122003' '(at3g54110 : 497.0) Member of Uncoupling protein PUMP2 family. Encodes a mitochondrial uncoupling protein AtUCP1 involved in maintain the redox poise of the mitochondrial electron transport chain to facilitate photosynthetic metabolism. Disruption of UCP1 results in a photosynthetic phenotype. Specifically there is a restriction in photorespiration with a decrease in the rate of oxidation of photorespiratory glycine in the mitochondrion. This change leads to an associated reduced photosynthetic carbon assimilation rate.; plant uncoupling mitochondrial protein 1 (PUMP1); FUNCTIONS IN: oxidative phosphorylation uncoupler activity, binding; INVOLVED IN: transport, photosynthesis, photorespiration; LOCATED IN: mitochondrion, mitochondrial inner membrane, plasma membrane, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial brown fat uncoupling protein (InterPro:IPR002030), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: uncoupling protein 2 (TAIR:AT5G58970.1); Has 26567 Blast hits to 13376 proteins in 459 species: Archae - 0; Bacteria - 2; Metazoa - 11203; Fungi - 7876; Plants - 4909; Viruses - 3; Other Eukaryotes - 2574 (source: NCBI BLink). & (gnl|cdd|35972 : 388.0) no description available & (gnl|cdd|84566 : 85.3) no description available & (reliability: 994.0) & (original description: Putative PUMP1, Description = Mitochondrial uncoupling protein 1, PFAM = PF00153;PF00153;PF00153)' T '9.8' 'mitochondrial electron transport / ATP synthesis.uncoupling protein' 'niben101scf07511_140546-143514' '(at2g22500 : 389.0) Encodes one of the mitochondrial dicarboxylate carriers (DIC): DIC1 (AT2G22500), DIC2 (AT4G24570), DIC3 (AT5G09470).; uncoupling protein 5 (UCP5); FUNCTIONS IN: binding, dicarboxylic acid transmembrane transporter activity; INVOLVED IN: transport, mitochondrial transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial brown fat uncoupling protein (InterPro:IPR002030), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: dicarboxylate carrier 2 (TAIR:AT4G24570.1); Has 25222 Blast hits to 13203 proteins in 454 species: Archae - 0; Bacteria - 2; Metazoa - 10525; Fungi - 7328; Plants - 4898; Viruses - 0; Other Eukaryotes - 2469 (source: NCBI BLink). & (gnl|cdd|35978 : 359.0) no description available & (gnl|cdd|84566 : 84.6) no description available & (reliability: 736.0) & (original description: Putative PUMP4, Description = Mitochondrial uncoupling protein 4, PFAM = PF00153;PF00153;PF00153)' T '9.8' 'mitochondrial electron transport / ATP synthesis.uncoupling protein' 'niben101scf14299_151872-154996' '(at2g22500 : 405.0) Encodes one of the mitochondrial dicarboxylate carriers (DIC): DIC1 (AT2G22500), DIC2 (AT4G24570), DIC3 (AT5G09470).; uncoupling protein 5 (UCP5); FUNCTIONS IN: binding, dicarboxylic acid transmembrane transporter activity; INVOLVED IN: transport, mitochondrial transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial brown fat uncoupling protein (InterPro:IPR002030), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: dicarboxylate carrier 2 (TAIR:AT4G24570.1); Has 25222 Blast hits to 13203 proteins in 454 species: Archae - 0; Bacteria - 2; Metazoa - 10525; Fungi - 7328; Plants - 4898; Viruses - 0; Other Eukaryotes - 2469 (source: NCBI BLink). & (gnl|cdd|35978 : 364.0) no description available & (gnl|cdd|84566 : 83.4) no description available & (reliability: 768.0) & (original description: Putative ucpB, Description = Mitochondrial 2-oxoglutarate/malate carrier protein, PFAM = PF00153;PF00153;PF00153)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'nbv0.3scaffold7333_34323-38597' '(at1g51650 : 123.0) ATP synthase epsilon chain, mitochondrial; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP biosynthetic process, ATP synthesis coupled proton transport; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, epsilon subunit, mitochondrial (InterPro:IPR006721); Has 247 Blast hits to 247 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 12; Plants - 69; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (q06450|atp5e_ipoba : 122.0) ATP synthase epsilon chain, mitochondrial (EC 3.6.3.14) - Ipomoea batatas (Sweet potato) (Batate) & (reliability: 246.0) & (original description: Putative meatpase, Description = ATP synthase subunit epsilon, mitochondrial, PFAM = PF04627)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'nbv0.3scaffold46201_5886-12110' '(p22778|atpo_ipoba : 314.0) ATP synthase delta chain, mitochondrial precursor (EC 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) - Ipomoea batatas (Sweet potato) (Batate) & (at5g13450 : 231.0) delta subunit of Mt ATP synthase (ATP5); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, cobalt ion binding, zinc ion binding; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: mitochondrion, chloroplast, plasma membrane, membrane, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, OSCP/delta subunit (InterPro:IPR000711); Has 5632 Blast hits to 5632 proteins in 1944 species: Archae - 0; Bacteria - 3697; Metazoa - 218; Fungi - 134; Plants - 154; Viruses - 0; Other Eukaryotes - 1429 (source: NCBI BLink). & (gnl|cdd|36875 : 202.0) no description available & (gnl|cdd|84616 : 159.0) no description available & (reliability: 462.0) & (original description: Putative atpH, Description = Oligomycin sensitivity conferring protein, PFAM = PF00213)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'nbv0.5scaffold165_844543-850149' '(p17614|atpbm_nicpl : 921.0) ATP synthase subunit beta, mitochondrial precursor (EC 3.6.3.14) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|82909 : 853.0) no description available & (at5g08680 : 843.0) Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level.; ATP synthase alpha/beta family protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, copper ion binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, membrane, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATP synthase, F1 beta subunit (InterPro:IPR020971), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36564 : 813.0) no description available & (reliability: 1686.0) & (original description: Putative ATPB, Description = ATP synthase subunit beta, mitochondrial, PFAM = PF02874;PF00006)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'nbv0.5scaffold654_453273-455779' '(gnl|cdd|79277 : 210.0) no description available & (gnl|cdd|36564 : 181.0) no description available & (p06541|atpb_chlre : 176.0) ATP synthase subunit beta (EC 3.6.3.14) (ATPase subunit beta) (ATP synthase F1 sector subunit beta) - Chlamydomonas reinhardtii & (atcg00480 : 162.0) chloroplast-encoded gene for beta subunit of ATP synthase; ATP synthase subunit beta (PB); FUNCTIONS IN: hydrogen ion transmembrane transporter activity, zinc ion binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cold, ATP synthesis coupled proton transport; LOCATED IN: in 11 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1). & (reliability: 318.0) & (original description: Putative atbB, Description = ATP synthase F1 sector subunit beta, PFAM = PF00006)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'nbv0.5scaffold2591_116916-120101' '(at4g26210 : 205.0) Mitochondrial ATP synthase subunit G protein; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; LOCATED IN: mitochondrial proton-transporting ATP synthase complex, coupling factor F(o); EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit G, mitochondrial (InterPro:IPR006808); BEST Arabidopsis thaliana protein match is: Mitochondrial ATP synthase subunit G protein (TAIR:AT4G29480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68296 : 95.8) no description available & (reliability: 410.0) & (original description: Putative At4g29480, Description = AT4g29480/F17A13_300, PFAM = PF04718)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'nbv0.5scaffold2922_207593-210243' '(p17614|atpbm_nicpl : 216.0) ATP synthase subunit beta, mitochondrial precursor (EC 3.6.3.14) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g08680 : 135.0) Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level.; ATP synthase alpha/beta family protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, copper ion binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, membrane, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATP synthase, F1 beta subunit (InterPro:IPR020971), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36564 : 118.0) no description available & (gnl|cdd|82909 : 114.0) no description available & (reliability: 270.0) & (original description: Putative atpD, Description = ATP synthase subunit beta, PFAM = PF02874;PF11421)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben044scf00003250ctg003_2482-4949' '(p41248|ymf19_helan : 246.0) Hypothetical protein ymf19 (ORFB) - Helianthus annuus (Common sunflower) & (atmg00480 : 231.0) Encodes subunit 8 of the mitochondrial F(O) ATP synthase complex.; Plant mitochondrial ATPase, F0 complex, subunit 8 protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: mitochondrion, chloroplast, mitochondrial proton-transporting ATP synthase complex, coupling factor F(o); EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit 8, mitochondrial, plant (InterPro:IPR003319), Protein of unknown function DUF1082, plant mitochondria (InterPro:IPR009455); BEST Arabidopsis thaliana protein match is: Plant mitochondrial ATPase, F0 complex, subunit 8 protein (TAIR:AT2G07707.1). & (gnl|cdd|69942 : 97.0) no description available & (reliability: 462.0) & (original description: Putative atp8, Description = ATPase subunit 8, PFAM = PF06449;PF02326)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben044scf00006615ctg003_1-4110' '(at5g16350 : 89.7) O-acyltransferase (WSD1-like) family protein; CONTAINS InterPro DOMAIN/s: O-acyltransferase, WSD1, C-terminal (InterPro:IPR009721), O-acyltransferase, WSD1, N-terminal (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT5G12420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative FOP, Description = O-acyltransferase (WSD1-like) family protein, PFAM = )' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben044scf00019305ctg019_15078-20789' '(p17614|atpbm_nicpl : 926.0) ATP synthase subunit beta, mitochondrial precursor (EC 3.6.3.14) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|82909 : 855.0) no description available & (at5g08690 : 842.0) Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level.; ATP synthase alpha/beta family protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, poly(U) RNA binding, copper ion binding; INVOLVED IN: proton transport, ATP metabolic process, ATP synthesis coupled proton transport, ATP biosynthetic process; LOCATED IN: mitochondrion, nucleolus, mitochondrial respiratory chain complex I, chloroplast envelope, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATP synthase, F1 beta subunit (InterPro:IPR020971), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36564 : 810.0) no description available & (reliability: 1684.0) & (original description: Putative ATPB, Description = ATP synthase subunit beta, mitochondrial, PFAM = PF02874;PF00006;PF11421)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf00033_172072-187188' '(p26360|atpg3_ipoba : 511.0) ATP synthase gamma chain, mitochondrial precursor (EC 3.6.3.14) - Ipomoea batatas (Sweet potato) (Batate) & (at2g33040 : 468.0) gamma subunit of Mt ATP synthase (ATP3); FUNCTIONS IN: zinc ion binding; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, gamma subunit (InterPro:IPR000131); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, gamma subunit protein (TAIR:AT1G15700.1); Has 9548 Blast hits to 9546 proteins in 2754 species: Archae - 5; Bacteria - 5621; Metazoa - 285; Fungi - 151; Plants - 166; Viruses - 0; Other Eukaryotes - 3320 (source: NCBI BLink). & (gnl|cdd|84628 : 289.0) no description available & (gnl|cdd|36744 : 286.0) no description available & (reliability: 936.0) & (original description: Putative ATPC, Description = ATP synthase subunit gamma, mitochondrial, PFAM = PF00231)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf00163_791575-807652' '(q40089|atp4_ipoba : 332.0) ATP synthase delta' chain, mitochondrial precursor (EC 3.6.3.14) - Ipomoea batatas (Sweet potato) (Batate) & (at5g47030 : 264.0) Encodes the mitochondrial ATP synthase subunit delta.; ATPase, F1 complex, delta/epsilon subunit; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, zinc ion binding; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, mitochondrial proton-transporting ATP synthase complex, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, delta/epsilon subunit, N-terminal (InterPro:IPR020546), ATPase, F1 complex, delta/epsilon subunit (InterPro:IPR001469); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36969 : 160.0) no description available & (gnl|cdd|30704 : 83.8) no description available & (reliability: 528.0) & (original description: Putative PPFRU36, Description = ATP synthase subunit delta', mitochondrial, PFAM = PF02823)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf00430_110311-112577' '(at5g59613 : 80.1) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrial respiratory chain complex III; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46430.1). & (reliability: 160.2) & (original description: Putative At3g46430, Description = ATP synthase 6 kDa subunit, mitochondrial, PFAM = )' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf00454_646955-652350' '(q40089|atp4_ipoba : 337.0) ATP synthase delta' chain, mitochondrial precursor (EC 3.6.3.14) - Ipomoea batatas (Sweet potato) (Batate) & (at5g47030 : 274.0) Encodes the mitochondrial ATP synthase subunit delta.; ATPase, F1 complex, delta/epsilon subunit; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, zinc ion binding; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, mitochondrial proton-transporting ATP synthase complex, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, delta/epsilon subunit, N-terminal (InterPro:IPR020546), ATPase, F1 complex, delta/epsilon subunit (InterPro:IPR001469); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36969 : 160.0) no description available & (gnl|cdd|30704 : 83.0) no description available & (reliability: 548.0) & (original description: Putative atpC, Description = ATP synthase subunit delta', mitochondrial, PFAM = PF02823)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf00551_654997-658113' '(at4g26210 : 201.0) Mitochondrial ATP synthase subunit G protein; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; LOCATED IN: mitochondrial proton-transporting ATP synthase complex, coupling factor F(o); EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit G, mitochondrial (InterPro:IPR006808); BEST Arabidopsis thaliana protein match is: Mitochondrial ATP synthase subunit G protein (TAIR:AT4G29480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68296 : 93.1) no description available & (reliability: 402.0) & (original description: Putative At4g29480, Description = AT4g29480/F17A13_300, PFAM = PF04718)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf00854_1082163-1085431' '(gnl|cdd|82909 : 135.0) no description available & (gnl|cdd|36564 : 117.0) no description available & (q8s8w8|atpb_atrbe : 114.0) ATP synthase subunit beta (EC 3.6.3.14) (ATPase subunit beta) (ATP synthase F1 sector subunit beta) - Atropa belladonna (Belladonna) (Deadly nightshade) & (atcg00480 : 111.0) chloroplast-encoded gene for beta subunit of ATP synthase; ATP synthase subunit beta (PB); FUNCTIONS IN: hydrogen ion transmembrane transporter activity, zinc ion binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cold, ATP synthesis coupled proton transport; LOCATED IN: in 11 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1). & (reliability: 206.0) & (original description: Putative atpB, Description = ATP synthase F1 sector subunit beta, PFAM = PF00006)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf00876_194713-202595' '(at5g53390 : 464.0) O-acyltransferase (WSD1-like) family protein; CONTAINS InterPro DOMAIN/s: O-acyltransferase, WSD1, C-terminal (InterPro:IPR009721), O-acyltransferase, WSD1, N-terminal (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT2G38995.2); Has 1220 Blast hits to 1207 proteins in 180 species: Archae - 4; Bacteria - 957; Metazoa - 16; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|70441 : 213.0) no description available & (reliability: 836.0) & (original description: Putative FOP, Description = FOLDED PETALS, PFAM = PF03007;PF06974)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf00905_1611663-1617888' '(at3g49190 : 195.0) O-acyltransferase (WSD1-like) family protein; CONTAINS InterPro DOMAIN/s: O-acyltransferase, WSD1, C-terminal (InterPro:IPR009721), O-acyltransferase, WSD1, N-terminal (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT3G49210.1); Has 1419 Blast hits to 1410 proteins in 214 species: Archae - 2; Bacteria - 1155; Metazoa - 6; Fungi - 2; Plants - 225; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|70441 : 86.8) no description available & (reliability: 372.0) & (original description: Putative TCM_046721, Description = O-acyltransferase family protein, PFAM = PF03007;PF06974)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf00974_18055-24407' '(p26360|atpg3_ipoba : 513.0) ATP synthase gamma chain, mitochondrial precursor (EC 3.6.3.14) - Ipomoea batatas (Sweet potato) (Batate) & (at2g33040 : 476.0) gamma subunit of Mt ATP synthase (ATP3); FUNCTIONS IN: zinc ion binding; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, gamma subunit (InterPro:IPR000131); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, gamma subunit protein (TAIR:AT1G15700.1); Has 9548 Blast hits to 9546 proteins in 2754 species: Archae - 5; Bacteria - 5621; Metazoa - 285; Fungi - 151; Plants - 166; Viruses - 0; Other Eukaryotes - 3320 (source: NCBI BLink). & (gnl|cdd|36744 : 289.0) no description available & (gnl|cdd|84628 : 286.0) no description available & (reliability: 952.0) & (original description: Putative ATPC, Description = ATP synthase subunit gamma, mitochondrial, PFAM = PF00231)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf01146_418340-422041' '(at4g26210 : 200.0) Mitochondrial ATP synthase subunit G protein; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; LOCATED IN: mitochondrial proton-transporting ATP synthase complex, coupling factor F(o); EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit G, mitochondrial (InterPro:IPR006808); BEST Arabidopsis thaliana protein match is: Mitochondrial ATP synthase subunit G protein (TAIR:AT4G29480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68296 : 95.8) no description available & (reliability: 400.0) & (original description: Putative At2g19680, Description = Copia-like retroelement pol polyprotein, PFAM = PF04718)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf01271_170643-177816' '(at1g51650 : 120.0) ATP synthase epsilon chain, mitochondrial; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP biosynthetic process, ATP synthesis coupled proton transport; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, epsilon subunit, mitochondrial (InterPro:IPR006721); Has 247 Blast hits to 247 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 12; Plants - 69; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (q06450|atp5e_ipoba : 120.0) ATP synthase epsilon chain, mitochondrial (EC 3.6.3.14) - Ipomoea batatas (Sweet potato) (Batate) & (reliability: 240.0) & (original description: Putative meatpase, Description = ATP synthase subunit epsilon, mitochondrial, PFAM = PF04627)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf01460_482222-487506' '(p17614|atpbm_nicpl : 937.0) ATP synthase subunit beta, mitochondrial precursor (EC 3.6.3.14) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|82909 : 856.0) no description available & (at5g08690 : 840.0) Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level.; ATP synthase alpha/beta family protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, poly(U) RNA binding, copper ion binding; INVOLVED IN: proton transport, ATP metabolic process, ATP synthesis coupled proton transport, ATP biosynthetic process; LOCATED IN: mitochondrion, nucleolus, mitochondrial respiratory chain complex I, chloroplast envelope, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATP synthase, F1 beta subunit (InterPro:IPR020971), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36564 : 810.0) no description available & (reliability: 1680.0) & (original description: Putative ATPB, Description = ATP synthase subunit beta, mitochondrial, PFAM = PF02874;PF11421;PF00006)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf01949_21687-24154' '(p41248|ymf19_helan : 280.0) Hypothetical protein ymf19 (ORFB) - Helianthus annuus (Common sunflower) & (atmg00480 : 258.0) Encodes subunit 8 of the mitochondrial F(O) ATP synthase complex.; Plant mitochondrial ATPase, F0 complex, subunit 8 protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: mitochondrion, chloroplast, mitochondrial proton-transporting ATP synthase complex, coupling factor F(o); EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit 8, mitochondrial, plant (InterPro:IPR003319), Protein of unknown function DUF1082, plant mitochondria (InterPro:IPR009455); BEST Arabidopsis thaliana protein match is: Plant mitochondrial ATPase, F0 complex, subunit 8 protein (TAIR:AT2G07707.1). & (gnl|cdd|69942 : 111.0) no description available & (reliability: 516.0) & (original description: Putative atp8, Description = ATPase subunit 8, PFAM = PF06449;PF02326)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf02338_72995-78634' '(at4g29480 : 186.0) Mitochondrial ATP synthase subunit G protein; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit G, mitochondrial (InterPro:IPR006808); BEST Arabidopsis thaliana protein match is: Mitochondrial ATP synthase subunit G protein (TAIR:AT2G19680.2); Has 96 Blast hits to 96 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|68296 : 87.3) no description available & (reliability: 372.0) & (original description: Putative At4g29480, Description = AT4g29480/F17A13_300, PFAM = PF04718)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf02828_15251-30892' '(p17614|atpbm_nicpl : 858.0) ATP synthase subunit beta, mitochondrial precursor (EC 3.6.3.14) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|82909 : 856.0) no description available & (gnl|cdd|36564 : 813.0) no description available & (at5g08690 : 802.0) Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level.; ATP synthase alpha/beta family protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, poly(U) RNA binding, copper ion binding; INVOLVED IN: proton transport, ATP metabolic process, ATP synthesis coupled proton transport, ATP biosynthetic process; LOCATED IN: mitochondrion, nucleolus, mitochondrial respiratory chain complex I, chloroplast envelope, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATP synthase, F1 beta subunit (InterPro:IPR020971), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1604.0) & (original description: Putative ATPB, Description = ATP synthase subunit beta, mitochondrial, PFAM = PF02874;PF11421;PF00006)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf03039_314599-317709' '(at1g51650 : 119.0) ATP synthase epsilon chain, mitochondrial; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP biosynthetic process, ATP synthesis coupled proton transport; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, epsilon subunit, mitochondrial (InterPro:IPR006721); Has 247 Blast hits to 247 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 12; Plants - 69; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (q06450|atp5e_ipoba : 119.0) ATP synthase epsilon chain, mitochondrial (EC 3.6.3.14) - Ipomoea batatas (Sweet potato) (Batate) & (reliability: 238.0) & (original description: Putative meatpase, Description = ATP synthase subunit epsilon, mitochondrial, PFAM = PF04627)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf03579_209741-227458' '(p22778|atpo_ipoba : 305.0) ATP synthase delta chain, mitochondrial precursor (EC 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) - Ipomoea batatas (Sweet potato) (Batate) & (at5g13450 : 229.0) delta subunit of Mt ATP synthase (ATP5); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, cobalt ion binding, zinc ion binding; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: mitochondrion, chloroplast, plasma membrane, membrane, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, OSCP/delta subunit (InterPro:IPR000711); Has 5632 Blast hits to 5632 proteins in 1944 species: Archae - 0; Bacteria - 3697; Metazoa - 218; Fungi - 134; Plants - 154; Viruses - 0; Other Eukaryotes - 1429 (source: NCBI BLink). & (gnl|cdd|36875 : 203.0) no description available & (gnl|cdd|84616 : 158.0) no description available & (reliability: 458.0) & (original description: Putative atpH, Description = Oligomycin sensitivity conferring protein, PFAM = PF00213)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf03679_340419-347434' '(q40089|atp4_ipoba : 335.0) ATP synthase delta' chain, mitochondrial precursor (EC 3.6.3.14) - Ipomoea batatas (Sweet potato) (Batate) & (at5g47030 : 262.0) Encodes the mitochondrial ATP synthase subunit delta.; ATPase, F1 complex, delta/epsilon subunit; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, zinc ion binding; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, mitochondrial proton-transporting ATP synthase complex, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, delta/epsilon subunit, N-terminal (InterPro:IPR020546), ATPase, F1 complex, delta/epsilon subunit (InterPro:IPR001469); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36969 : 159.0) no description available & (gnl|cdd|30704 : 83.0) no description available & (reliability: 524.0) & (original description: Putative atpC, Description = ATP synthase F1, epsilon subunit, PFAM = PF02823)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf03765_2176-5035' '(p17254|atp9_helan : 87.8) ATP synthase protein 9, mitochondrial (EC 3.6.3.14) (Lipid-binding protein) - Helianthus annuus (Common sunflower) & (atmg01080 : 82.8) subunit 9 of mitochondrial F0-ATPase; mitochondrial F0-ATPase subunit 9 (ATP9); FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit C, DCCD-binding site (InterPro:IPR020537), ATPase, F0/V0 complex, subunit C (InterPro:IPR002379), ATPase, F0 complex, subunit C (InterPro:IPR000454); BEST Arabidopsis thaliana protein match is: ATP synthase subunit C family protein (TAIR:AT2G07671.1). & (reliability: 165.6) & (original description: Putative ATP9, Description = ATP synthase subunit 9, mitochondrial, PFAM = PF00137)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf04184_65735-75782' '(at3g52300 : 234.0) "ATP synthase D chain, mitochondrial" (ATPQ); FUNCTIONS IN: copper ion binding, zinc ion binding; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, cytosolic ribosome, nucleolus, chloroplast, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38576 : 118.0) no description available & (reliability: 468.0) & (original description: Putative atp5, Description = ATP synthase subunit D, PFAM = PF05873)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf04737_40189-46021' '(at3g52300 : 234.0) "ATP synthase D chain, mitochondrial" (ATPQ); FUNCTIONS IN: copper ion binding, zinc ion binding; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, cytosolic ribosome, nucleolus, chloroplast, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38576 : 119.0) no description available & (reliability: 468.0) & (original description: Putative atpQ, Description = ATP synthase subunit D, PFAM = PF05873)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf04958_68122-71648' '(p05495|atpam_nicpl : 979.0) ATP synthase subunit alpha, mitochondrial (EC 3.6.3.14) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at2g07698 : 937.0) ATPase, F1 complex, alpha subunit protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, poly(U) RNA binding, zinc ion binding; INVOLVED IN: proton transport, ATP metabolic process, ATP synthesis coupled proton transport; LOCATED IN: in 7 components; EXPRESSED IN: male gametophyte, juvenile leaf, cultured cell, leaf; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, alpha subunit (InterPro:IPR005294), ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase subunit 1 (TAIR:ATMG01190.1); Has 42544 Blast hits to 42509 proteins in 10112 species: Archae - 769; Bacteria - 22602; Metazoa - 1520; Fungi - 703; Plants - 8267; Viruses - 0; Other Eukaryotes - 8683 (source: NCBI BLink). & (gnl|cdd|82910 : 796.0) no description available & (gnl|cdd|36567 : 337.0) no description available & (reliability: 1874.0) & (original description: Putative ATPA, Description = ATP synthase subunit alpha, mitochondrial, PFAM = PF00006;PF00306;PF02874)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf04973_54053-61401' '(p17614|atpbm_nicpl : 955.0) ATP synthase subunit beta, mitochondrial precursor (EC 3.6.3.14) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|82909 : 854.0) no description available & (at5g08670 : 838.0) Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level.; ATP synthase alpha/beta family protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, copper ion binding, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to oxidative stress; LOCATED IN: mitochondrion, plasma membrane, chloroplast, mitochondrial respiratory chain complex I, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 8 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATP synthase, F1 beta subunit (InterPro:IPR020971), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36564 : 805.0) no description available & (reliability: 1676.0) & (original description: Putative ATPB, Description = ATP synthase subunit beta, mitochondrial, PFAM = PF11421;PF02874;PF00006)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf05449_57106-60513' '(at4g26210 : 204.0) Mitochondrial ATP synthase subunit G protein; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; LOCATED IN: mitochondrial proton-transporting ATP synthase complex, coupling factor F(o); EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit G, mitochondrial (InterPro:IPR006808); BEST Arabidopsis thaliana protein match is: Mitochondrial ATP synthase subunit G protein (TAIR:AT4G29480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68296 : 95.4) no description available & (reliability: 408.0) & (original description: Putative At4g29480, Description = AT4g29480/F17A13_300, PFAM = PF04718)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf07103_165009-167573' '(gnl|cdd|79277 : 195.0) no description available & (gnl|cdd|36564 : 169.0) no description available & (p06541|atpb_chlre : 162.0) ATP synthase subunit beta (EC 3.6.3.14) (ATPase subunit beta) (ATP synthase F1 sector subunit beta) - Chlamydomonas reinhardtii & (atcg00480 : 149.0) chloroplast-encoded gene for beta subunit of ATP synthase; ATP synthase subunit beta (PB); FUNCTIONS IN: hydrogen ion transmembrane transporter activity, zinc ion binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cold, ATP synthesis coupled proton transport; LOCATED IN: in 11 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1). & (reliability: 294.0) & (original description: Putative atbB, Description = ATP synthase subunit beta, PFAM = PF00006)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf07741_190877-195413' '(at1g51650 : 121.0) ATP synthase epsilon chain, mitochondrial; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP biosynthetic process, ATP synthesis coupled proton transport; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, epsilon subunit, mitochondrial (InterPro:IPR006721); Has 247 Blast hits to 247 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 12; Plants - 69; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (q06450|atp5e_ipoba : 121.0) ATP synthase epsilon chain, mitochondrial (EC 3.6.3.14) - Ipomoea batatas (Sweet potato) (Batate) & (reliability: 242.0) & (original description: Putative meatpase, Description = ATP synthase subunit epsilon, mitochondrial, PFAM = PF04627)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf08179_130615-137373' '(q40089|atp4_ipoba : 335.0) ATP synthase delta' chain, mitochondrial precursor (EC 3.6.3.14) - Ipomoea batatas (Sweet potato) (Batate) & (at5g47030 : 270.0) Encodes the mitochondrial ATP synthase subunit delta.; ATPase, F1 complex, delta/epsilon subunit; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, zinc ion binding; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, mitochondrial proton-transporting ATP synthase complex, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, delta/epsilon subunit, N-terminal (InterPro:IPR020546), ATPase, F1 complex, delta/epsilon subunit (InterPro:IPR001469); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36969 : 160.0) no description available & (gnl|cdd|30704 : 83.4) no description available & (reliability: 540.0) & (original description: Putative atpC, Description = ATP synthase subunit delta', mitochondrial, PFAM = PF02823)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf08565_17167-20351' '(p05499|atp6_tobac : 640.0) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6) - Nicotiana tabacum (Common tobacco) & (atmg00410 : 433.0) ATPase subunit 6; ATPase subunit 6-1 (ATP6-1); CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit A (InterPro:IPR000568); BEST Arabidopsis thaliana protein match is: ATPase, F0 complex, subunit A protein (TAIR:AT2G07741.1). & (gnl|cdd|39864 : 217.0) no description available & (gnl|cdd|84536 : 182.0) no description available & (reliability: 866.0) & (original description: Putative ATP6, Description = ATP synthase subunit a, PFAM = PF00119)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf08672_395665-397353' '(p09003|mi25_tobac : 298.0) Uncharacterized mitochondrial 22 kDa protein (ORF 25) - Nicotiana tabacum (Common tobacco) & (atmg00640 : 251.0) encodes a plant b subunit of mitochondrial ATP synthase based on structural similarity and the presence in the F(0) complex.; hydrogen ion transporting ATP synthases, rotational mechanism;zinc ion binding; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, zinc ion binding; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: mitochondrion, membrane, mitochondrial proton-transporting ATP synthase complex, coupling factor F(o); EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit B, mitochondrial (InterPro:IPR008688). & (gnl|cdd|68956 : 147.0) no description available & (reliability: 502.0) & (original description: Putative atp4, Description = ATPase subunit 4, PFAM = PF05405)' T '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'niben101scf12308_103252-109459' '(p17614|atpbm_nicpl : 944.0) ATP synthase subunit beta, mitochondrial precursor (EC 3.6.3.14) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|82909 : 855.0) no description available & (at5g08680 : 839.0) Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level.; ATP synthase alpha/beta family protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, copper ion binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, membrane, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATP synthase, F1 beta subunit (InterPro:IPR020971), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36564 : 808.0) no description available & (reliability: 1678.0) & (original description: Putative ATPB, Description = ATP synthase subunit beta, mitochondrial, PFAM = PF02874;PF11421;PF00006)' T '9.99' 'mitochondrial electron transport / ATP synthesis.unspecified' 'nbv0.3scaffold3294_65441-74912' '(at4g21090 : 228.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 192.0) no description available & (reliability: 456.0) & (original description: Putative fdx, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T '9.99' 'mitochondrial electron transport / ATP synthesis.unspecified' 'nbv0.3scaffold21476_16560-27592' '(at4g01660 : 682.0) Encodes an ABC1-like protein, member of the ATH subfamily; putative ABC transporter; isolated by functional complementation of a yeast abc1 mutant; ABC transporter 1 (ABC1); CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ABC2 homolog 13 (TAIR:AT5G64940.2); Has 8616 Blast hits to 8614 proteins in 1786 species: Archae - 122; Bacteria - 4355; Metazoa - 377; Fungi - 416; Plants - 667; Viruses - 9; Other Eukaryotes - 2670 (source: NCBI BLink). & (gnl|cdd|36448 : 499.0) no description available & (gnl|cdd|31005 : 242.0) no description available & (reliability: 1364.0) & (original description: Putative ABC1, Description = Protein ABC transporter 1, mitochondrial, PFAM = PF03109)' T '9.99' 'mitochondrial electron transport / ATP synthesis.unspecified' 'nbv0.5scaffold1066_285652-293460' '(at4g21090 : 225.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 189.0) no description available & (reliability: 450.0) & (original description: Putative adxhom, Description = Ferredoxin, PFAM = PF00111)' T '9.99' 'mitochondrial electron transport / ATP synthesis.unspecified' 'nbv0.5scaffold2318_234619-252823' '(at4g05450 : 229.0) mitochondrial ferredoxin 1 (MFDX1); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: pollen tube development; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: MITOCHONDRIAL FERREDOXIN 2 (TAIR:AT4G21090.3); Has 4425 Blast hits to 4425 proteins in 1188 species: Archae - 2; Bacteria - 2167; Metazoa - 246; Fungi - 135; Plants - 85; Viruses - 0; Other Eukaryotes - 1790 (source: NCBI BLink). & (gnl|cdd|38519 : 192.0) no description available & (reliability: 456.0) & (original description: Putative fdxB, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T '9.99' 'mitochondrial electron transport / ATP synthesis.unspecified' 'nbv0.5scaffold2683_193068-215585' '(at4g21090 : 226.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 190.0) no description available & (reliability: 452.0) & (original description: Putative fdx, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T '9.99' 'mitochondrial electron transport / ATP synthesis.unspecified' 'nbv0.5scaffold3507_268022-279051' '(at4g01660 : 687.0) Encodes an ABC1-like protein, member of the ATH subfamily; putative ABC transporter; isolated by functional complementation of a yeast abc1 mutant; ABC transporter 1 (ABC1); CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ABC2 homolog 13 (TAIR:AT5G64940.2); Has 8616 Blast hits to 8614 proteins in 1786 species: Archae - 122; Bacteria - 4355; Metazoa - 377; Fungi - 416; Plants - 667; Viruses - 9; Other Eukaryotes - 2670 (source: NCBI BLink). & (gnl|cdd|36448 : 500.0) no description available & (gnl|cdd|31005 : 243.0) no description available & (reliability: 1374.0) & (original description: Putative ABC1, Description = Protein ABC transporter 1, mitochondrial, PFAM = PF03109)' T '9.99' 'mitochondrial electron transport / ATP synthesis.unspecified' 'niben044ctg26167358_1-4718' '(at4g21090 : 222.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 186.0) no description available & (reliability: 444.0) & (original description: Putative fdxB, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T '9.99' 'mitochondrial electron transport / ATP synthesis.unspecified' 'niben101scf00327_181564-191679' '(at4g21090 : 219.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 185.0) no description available & (reliability: 438.0) & (original description: Putative fdxB, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T '9.99' 'mitochondrial electron transport / ATP synthesis.unspecified' 'niben101scf02043_685074-690922' '(at2g03690 : 352.0) Ubiquinone biosynthesis protein COQ4 homolog.; coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquinone biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Coenzyme Q biosynthesis Coq4 (InterPro:IPR007715); Has 675 Blast hits to 675 proteins in 251 species: Archae - 0; Bacteria - 141; Metazoa - 162; Fungi - 176; Plants - 60; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (gnl|cdd|38454 : 291.0) no description available & (gnl|cdd|68588 : 291.0) no description available & (reliability: 704.0) & (original description: Putative coq4, Description = Coenzyme Q biosynthesis protein 4 homolog, PFAM = PF05019)' T '9.99' 'mitochondrial electron transport / ATP synthesis.unspecified' 'niben101scf05955_335299-339383' '(at4g01660 : 139.0) Encodes an ABC1-like protein, member of the ATH subfamily; putative ABC transporter; isolated by functional complementation of a yeast abc1 mutant; ABC transporter 1 (ABC1); CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ABC2 homolog 13 (TAIR:AT5G64940.2); Has 8616 Blast hits to 8614 proteins in 1786 species: Archae - 122; Bacteria - 4355; Metazoa - 377; Fungi - 416; Plants - 667; Viruses - 9; Other Eukaryotes - 2670 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative ABC1, Description = Ubiquinone biosynthesis protein, PFAM = )' T '9.99' 'mitochondrial electron transport / ATP synthesis.unspecified' 'niben101scf09098_108588-119351' '(at4g01660 : 685.0) Encodes an ABC1-like protein, member of the ATH subfamily; putative ABC transporter; isolated by functional complementation of a yeast abc1 mutant; ABC transporter 1 (ABC1); CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ABC2 homolog 13 (TAIR:AT5G64940.2); Has 8616 Blast hits to 8614 proteins in 1786 species: Archae - 122; Bacteria - 4355; Metazoa - 377; Fungi - 416; Plants - 667; Viruses - 9; Other Eukaryotes - 2670 (source: NCBI BLink). & (gnl|cdd|36448 : 502.0) no description available & (gnl|cdd|31005 : 240.0) no description available & (reliability: 1370.0) & (original description: Putative ABC1, Description = Protein ABC transporter 1, mitochondrial, PFAM = PF03109)' T '9.99' 'mitochondrial electron transport / ATP synthesis.unspecified' 'niben101scf10092_33169-50450' '(at4g21090 : 219.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 185.0) no description available & (reliability: 438.0) & (original description: Putative fdx, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T '9.99' 'mitochondrial electron transport / ATP synthesis.unspecified' 'niben101scf10498_246222-255845' '(at4g21090 : 228.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 193.0) no description available & (reliability: 456.0) & (original description: Putative fdx, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T '9.1001' 'mitochondrial electron transport / ATP synthesis' 'ubiquinone-20' 'Respiration; Redox electron carrier' M '9.1001' 'mitochondrial electron transport / ATP synthesis' 'vitamin k1' 'Respiration; Redox electron carrier' M '10' 'cell wall' 'nbv0.5scaffold4348_9516-12939' '(at4g24140 : 315.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G64670.1); Has 5648 Blast hits to 5647 proteins in 1115 species: Archae - 17; Bacteria - 3672; Metazoa - 316; Fungi - 186; Plants - 193; Viruses - 6; Other Eukaryotes - 1258 (source: NCBI BLink). & (gnl|cdd|36667 : 107.0) no description available & (reliability: 610.0) & (original description: Putative BnaA08g02430D, Description = BnaA08g02430D protein, PFAM = PF00561)' T '10' 'cell wall' 'niben044scf00002645ctg010_1-2441' '(at5g17780 : 194.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G17720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36667 : 104.0) no description available & (reliability: 376.0) & (original description: Putative BDG1, Description = Hydrolase, alpha/beta fold family protein, PFAM = PF00561)' T '10' 'cell wall' 'niben101scf11471_58112-64111' '(at4g24140 : 605.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G64670.1); Has 5648 Blast hits to 5647 proteins in 1115 species: Archae - 17; Bacteria - 3672; Metazoa - 316; Fungi - 186; Plants - 193; Viruses - 6; Other Eukaryotes - 1258 (source: NCBI BLink). & (gnl|cdd|36667 : 204.0) no description available & (gnl|cdd|30941 : 95.2) no description available & (reliability: 1174.0) & (original description: Putative BDG1, Description = Putative alpha/beta-hydrolase involved in synthesis of cutin, PFAM = PF00561)' T '10' 'cell wall' 'niben101scf17701_10987-17885' '(at4g24140 : 592.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G64670.1); Has 5648 Blast hits to 5647 proteins in 1115 species: Archae - 17; Bacteria - 3672; Metazoa - 316; Fungi - 186; Plants - 193; Viruses - 6; Other Eukaryotes - 1258 (source: NCBI BLink). & (gnl|cdd|36667 : 204.0) no description available & (gnl|cdd|30941 : 100.0) no description available & (reliability: 1144.0) & (original description: Putative Os06g0132500, Description = Os06g0132500 protein, PFAM = PF00561)' T '10.1' 'cell wall.precursor synthesis' 'niben044scf00013930ctg006_7578-16727' '(at1g31070 : 826.0) Encodes a protein that functions as an N-acetylglucosamine-1-phosphate uridylyltransferase that catalyzes the formation of UDP-N-acetylglucosamine (UDP-GlcNAc). This is an essential precursor for glycolipid and glycoprotein synthesis and is also used for regulatory protein modification in signaling pathways. The enzyme can also catalyze the reverse reaction using both UDP-GlcNAc and the less common UDP-N-acetylgalactosamine as substrates.; N-acetylglucosamine-1-phosphate uridylyltransferase 1 (GlcNAc1pUT1); FUNCTIONS IN: UDP-N-acetylglucosamine diphosphorylase activity, UDP-N-acetylgalactosamine diphosphorylase activity; INVOLVED IN: UDP-N-acetylglucosamine metabolic process, UDP-N-acetylgalactosamine metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: N-acetylglucosamine-1-phosphate uridylyltransferase 2 (TAIR:AT2G35020.1); Has 1399 Blast hits to 1393 proteins in 421 species: Archae - 0; Bacteria - 358; Metazoa - 399; Fungi - 277; Plants - 154; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37599 : 581.0) no description available & (gnl|cdd|34006 : 258.0) no description available & (reliability: 1652.0) & (original description: Putative uap1, Description = UDP-N-acetylglucosamine pyrophosphorylase, PFAM = PF01704)' T '10.1' 'cell wall.precursor synthesis' 'niben101scf01047_1-9056' '(at5g18070 : 696.0) encodes a novel protein involved in DNA repair from UV damage. Isolated by functional complementation of E. coli UV-sensitive mutants (UVR genes).; DNA-DAMAGE-REPAIR/TOLERATION 101 (DRT101); FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, phosphoacetylglucosamine mutase activity; INVOLVED IN: response to UV, photoreactive repair; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Phosphoacetylglucosamine mutase (InterPro:IPR016657), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); Has 6617 Blast hits to 6213 proteins in 2284 species: Archae - 117; Bacteria - 4667; Metazoa - 169; Fungi - 157; Plants - 47; Viruses - 0; Other Eukaryotes - 1460 (source: NCBI BLink). & (q6zdq1|agm1_orysa : 655.0) Phosphoacetylglucosamine mutase (EC 5.4.2.3) (PAGM) (Acetylglucosamine phosphomutase) (N-acetylglucosamine-phosphate mutase) - Oryza sativa (Rice) & (gnl|cdd|37748 : 614.0) no description available & (gnl|cdd|31306 : 122.0) no description available & (reliability: 1392.0) & (original description: Putative DRT101, Description = Phosphoacetylglucosamine mutase, PFAM = PF00408;PF02878;PF02880)' T '10.1' 'cell wall.precursor synthesis' 'niben101scf01739_385108-394953' '(at1g31070 : 825.0) Encodes a protein that functions as an N-acetylglucosamine-1-phosphate uridylyltransferase that catalyzes the formation of UDP-N-acetylglucosamine (UDP-GlcNAc). This is an essential precursor for glycolipid and glycoprotein synthesis and is also used for regulatory protein modification in signaling pathways. The enzyme can also catalyze the reverse reaction using both UDP-GlcNAc and the less common UDP-N-acetylgalactosamine as substrates.; N-acetylglucosamine-1-phosphate uridylyltransferase 1 (GlcNAc1pUT1); FUNCTIONS IN: UDP-N-acetylglucosamine diphosphorylase activity, UDP-N-acetylgalactosamine diphosphorylase activity; INVOLVED IN: UDP-N-acetylglucosamine metabolic process, UDP-N-acetylgalactosamine metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: N-acetylglucosamine-1-phosphate uridylyltransferase 2 (TAIR:AT2G35020.1); Has 1399 Blast hits to 1393 proteins in 421 species: Archae - 0; Bacteria - 358; Metazoa - 399; Fungi - 277; Plants - 154; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37599 : 584.0) no description available & (gnl|cdd|34006 : 259.0) no description available & (reliability: 1650.0) & (original description: Putative uap1, Description = UDP-N-acetylglucosamine pyrophosphorylase, PFAM = PF01704)' T '10.1' 'cell wall.precursor synthesis' 'niben101scf03705_260633-269690' '(at1g31070 : 835.0) Encodes a protein that functions as an N-acetylglucosamine-1-phosphate uridylyltransferase that catalyzes the formation of UDP-N-acetylglucosamine (UDP-GlcNAc). This is an essential precursor for glycolipid and glycoprotein synthesis and is also used for regulatory protein modification in signaling pathways. The enzyme can also catalyze the reverse reaction using both UDP-GlcNAc and the less common UDP-N-acetylgalactosamine as substrates.; N-acetylglucosamine-1-phosphate uridylyltransferase 1 (GlcNAc1pUT1); FUNCTIONS IN: UDP-N-acetylglucosamine diphosphorylase activity, UDP-N-acetylgalactosamine diphosphorylase activity; INVOLVED IN: UDP-N-acetylglucosamine metabolic process, UDP-N-acetylgalactosamine metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: N-acetylglucosamine-1-phosphate uridylyltransferase 2 (TAIR:AT2G35020.1); Has 1399 Blast hits to 1393 proteins in 421 species: Archae - 0; Bacteria - 358; Metazoa - 399; Fungi - 277; Plants - 154; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37599 : 585.0) no description available & (gnl|cdd|34006 : 261.0) no description available & (reliability: 1670.0) & (original description: Putative uap1, Description = UDP-N-acetylglucosamine pyrophosphorylase, PFAM = PF01704)' T '10.1' 'cell wall.precursor synthesis' 'niben101scf10448_31359-45535' '(at5g18070 : 700.0) encodes a novel protein involved in DNA repair from UV damage. Isolated by functional complementation of E. coli UV-sensitive mutants (UVR genes).; DNA-DAMAGE-REPAIR/TOLERATION 101 (DRT101); FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, phosphoacetylglucosamine mutase activity; INVOLVED IN: response to UV, photoreactive repair; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Phosphoacetylglucosamine mutase (InterPro:IPR016657), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); Has 6617 Blast hits to 6213 proteins in 2284 species: Archae - 117; Bacteria - 4667; Metazoa - 169; Fungi - 157; Plants - 47; Viruses - 0; Other Eukaryotes - 1460 (source: NCBI BLink). & (q6zdq1|agm1_orysa : 650.0) Phosphoacetylglucosamine mutase (EC 5.4.2.3) (PAGM) (Acetylglucosamine phosphomutase) (N-acetylglucosamine-phosphate mutase) - Oryza sativa (Rice) & (gnl|cdd|37748 : 615.0) no description available & (gnl|cdd|31306 : 118.0) no description available & (reliability: 1400.0) & (original description: Putative DRT101, Description = Phosphoacetylglucosamine mutase, PFAM = PF00408;PF02878;PF02878;PF02880)' T '10.1.1' 'cell wall.precursor synthesis.NDP sugar pyrophosphorylase' '' '' '10.1.1.1' 'cell wall.precursor synthesis.NDP sugar pyrophosphorylase.GDP mannose' 'niben044scf00039976ctg006_1091-4926' '(at2g39770 : 662.0) Encodes a GDP-mannose pyrophosphorylase/ mannose-1-pyrophosphatase. This enzyme provides GDP-mannose, which is used for cell wall carbohydrate biosynthesis and protein glycosylation as well as for ascorbate (vitamin C) biosynthesis. Mutations in this gene confer hypersensitivity to NH4+.; CYTOKINESIS DEFECTIVE 1 (CYT1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT3G55590.1). & (gnl|cdd|36536 : 559.0) no description available & (gnl|cdd|31401 : 298.0) no description available & (reliability: 1324.0) & (original description: Putative CYT1, Description = Mannose-1-phosphate guanylyltransferase 1, PFAM = PF00132;PF00483)' T '10.1.1.1' 'cell wall.precursor synthesis.NDP sugar pyrophosphorylase.GDP mannose' 'niben101scf00586_1420-4555' '(at2g39770 : 634.0) Encodes a GDP-mannose pyrophosphorylase/ mannose-1-pyrophosphatase. This enzyme provides GDP-mannose, which is used for cell wall carbohydrate biosynthesis and protein glycosylation as well as for ascorbate (vitamin C) biosynthesis. Mutations in this gene confer hypersensitivity to NH4+.; CYTOKINESIS DEFECTIVE 1 (CYT1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT3G55590.1). & (gnl|cdd|36536 : 544.0) no description available & (gnl|cdd|31401 : 292.0) no description available & (reliability: 1268.0) & (original description: Putative mpg1, Description = Mannose-1-phosphate guanyltransferase, PFAM = PF00132;PF00483)' T '10.1.1.1' 'cell wall.precursor synthesis.NDP sugar pyrophosphorylase.GDP mannose' 'niben101scf00806_482806-486515' '(at2g39770 : 658.0) Encodes a GDP-mannose pyrophosphorylase/ mannose-1-pyrophosphatase. This enzyme provides GDP-mannose, which is used for cell wall carbohydrate biosynthesis and protein glycosylation as well as for ascorbate (vitamin C) biosynthesis. Mutations in this gene confer hypersensitivity to NH4+.; CYTOKINESIS DEFECTIVE 1 (CYT1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT3G55590.1). & (gnl|cdd|36536 : 553.0) no description available & (gnl|cdd|31401 : 297.0) no description available & (reliability: 1316.0) & (original description: Putative CYT1, Description = Mannose-1-phosphate guanylyltransferase 1, PFAM = PF00132;PF00483)' T '10.1.1.1' 'cell wall.precursor synthesis.NDP sugar pyrophosphorylase.GDP mannose' 'niben101scf10330_39817-43572' '(at2g39770 : 664.0) Encodes a GDP-mannose pyrophosphorylase/ mannose-1-pyrophosphatase. This enzyme provides GDP-mannose, which is used for cell wall carbohydrate biosynthesis and protein glycosylation as well as for ascorbate (vitamin C) biosynthesis. Mutations in this gene confer hypersensitivity to NH4+.; CYTOKINESIS DEFECTIVE 1 (CYT1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT3G55590.1). & (gnl|cdd|36536 : 556.0) no description available & (gnl|cdd|31401 : 296.0) no description available & (reliability: 1328.0) & (original description: Putative CYT1, Description = Mannose-1-phosphate guanylyltransferase 1, PFAM = PF00483;PF00132)' T '10.1.1.2' 'cell wall.precursor synthesis.NDP sugar pyrophosphorylase.GDP fucose and fucokinase' 'niben101scf14922_56658-67339' '(at1g01220 : 1452.0) Encodes a bifunctional enzyme that has both L-fucokinase and GDP-L-fucose pyrophosphorylase activities. It catalyzes the two steps of the L-fucose salvage pathway for the generation of activated GDP-L-fucose. This pathway seems to be of minor importance for cell wall polysaccharide biosynthesis compared to the de novo GDP-L-fucose biosynthesis pathway in Arabidopsis.; L-fucokinase/GDP-L-fucose pyrophosphorylase (FKGP); FUNCTIONS IN: fucose-1-phosphate guanylyltransferase activity, fucokinase activity, ATP binding, galactokinase activity; INVOLVED IN: GDP-L-fucose salvage; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), L-fucokinase (InterPro:IPR012887), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); Has 1878 Blast hits to 1819 proteins in 539 species: Archae - 59; Bacteria - 918; Metazoa - 155; Fungi - 3; Plants - 87; Viruses - 3; Other Eukaryotes - 653 (source: NCBI BLink). & (gnl|cdd|87412 : 433.0) no description available & (gnl|cdd|39843 : 196.0) no description available & (reliability: 2904.0) & (original description: Putative FKGP, Description = Bifunctional fucokinase/fucose pyrophosphorylase, PFAM = PF08544;PF07959;PF00288)' T '10.1.1.20' 'cell wall.precursor synthesis.NDP sugar pyrophosphorylase.multiple NDP-Sugars' 'niben101scf05029_23524-41024' '(at5g52560 : 1016.0) Encodes a protein with UTP:sugar 1-phosphate uridylyltransferase activity, which has been shown to use a wide range of substrates including glucose-1-P, galactose-1-P, xylose-1-P, arabinose-1-P and glucuronate-1-P. The enzyme was shown to require Mg2+ or Mn2+ for activity. Mutations in USP can lead to a complete loss of male fertility.; UDP-sugar pyrophosphorylase (USP); FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: N-acetylglucosamine-1-phosphate uridylyltransferase 1 (TAIR:AT1G31070.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37599 : 305.0) no description available & (gnl|cdd|34006 : 95.4) no description available & (reliability: 2032.0) & (original description: Putative USP, Description = UDP-sugar pyrophosphorylase, PFAM = PF01704)' T '10.1.1.20' 'cell wall.precursor synthesis.NDP sugar pyrophosphorylase.multiple NDP-Sugars' 'niben101scf08753_258668-278377' '(at5g52560 : 1015.0) Encodes a protein with UTP:sugar 1-phosphate uridylyltransferase activity, which has been shown to use a wide range of substrates including glucose-1-P, galactose-1-P, xylose-1-P, arabinose-1-P and glucuronate-1-P. The enzyme was shown to require Mg2+ or Mn2+ for activity. Mutations in USP can lead to a complete loss of male fertility.; UDP-sugar pyrophosphorylase (USP); FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: N-acetylglucosamine-1-phosphate uridylyltransferase 1 (TAIR:AT1G31070.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37599 : 307.0) no description available & (gnl|cdd|34006 : 95.8) no description available & (reliability: 2030.0) & (original description: Putative USP, Description = UDP-sugar pyrophosphorylase, PFAM = PF01704)' T '10.1.2' 'cell wall.precursor synthesis.UGE' 'niben101scf00324_255790-262101' '(at4g10960 : 602.0) Encodes a protein with UDP-D-glucose 4-epimerase activity.; UDP-D-glucose/UDP-D-galactose 4-epimerase 5 (UGE5); FUNCTIONS IN: UDP-glucose 4-epimerase activity, protein dimerization activity; INVOLVED IN: response to stress; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, root, guard cell, leaf, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose 4-epimerase (InterPro:IPR005886), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucose/UDP-D-galactose 4-epimerase 2 (TAIR:AT4G23920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36585 : 501.0) no description available & (q43070|gale1_pea : 496.0) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (gnl|cdd|31284 : 451.0) no description available & (reliability: 1204.0) & (original description: Putative galE, Description = UDP-glucose 4-epimerase, PFAM = PF16363)' T '10.1.2' 'cell wall.precursor synthesis.UGE' 'niben101scf02011_438259-444247' '(at4g10960 : 588.0) Encodes a protein with UDP-D-glucose 4-epimerase activity.; UDP-D-glucose/UDP-D-galactose 4-epimerase 5 (UGE5); FUNCTIONS IN: UDP-glucose 4-epimerase activity, protein dimerization activity; INVOLVED IN: response to stress; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, root, guard cell, leaf, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose 4-epimerase (InterPro:IPR005886), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucose/UDP-D-galactose 4-epimerase 2 (TAIR:AT4G23920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36585 : 510.0) no description available & (q43070|gale1_pea : 481.0) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (gnl|cdd|31284 : 447.0) no description available & (reliability: 1176.0) & (original description: Putative galE, Description = UDP-glucose 4-epimerase, PFAM = PF16363)' T '10.1.2' 'cell wall.precursor synthesis.UGE' 'niben101scf07391_538125-543297' '(at1g12780 : 619.0) Encodes a UDP-glucose epimerase that catalyzes the interconversion of the sugar nucleotides UDP-glucose UDP-galactose via a UDP-4-keto-hexose intermediate. Responsive to stress.; UDP-D-glucose/UDP-D-galactose 4-epimerase 1 (UGE1); FUNCTIONS IN: UDP-glucose 4-epimerase activity, protein dimerization activity; INVOLVED IN: response to stress, galactose biosynthetic process; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 32 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose 4-epimerase (InterPro:IPR005886), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucose/UDP-D-galactose 4-epimerase 3 (TAIR:AT1G63180.1); Has 42430 Blast hits to 42420 proteins in 2995 species: Archae - 799; Bacteria - 25009; Metazoa - 650; Fungi - 500; Plants - 1081; Viruses - 38; Other Eukaryotes - 14353 (source: NCBI BLink). & (q43070|gale1_pea : 618.0) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (gnl|cdd|36585 : 497.0) no description available & (gnl|cdd|31284 : 447.0) no description available & (reliability: 1238.0) & (original description: Putative UGE1, Description = Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1, PFAM = PF16363)' T '10.1.3' 'cell wall.precursor synthesis.AXS' 'niben101scf01557_368965-376680' '(at1g08200 : 755.0) Encodes a putative UDP-D-apiose/UPD-D-xylose synthetase.; UDP-D-apiose/UDP-D-xylose synthase 2 (AXS2); FUNCTIONS IN: UDP-glucuronate decarboxylase activity; INVOLVED IN: nucleotide-sugar biosynthetic process; LOCATED IN: apoplast, cytoplasm; EXPRESSED IN: fruit, guard cell, cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-D-apiose/UDP-D-xylose synthase 1 (TAIR:AT2G27860.1); Has 18414 Blast hits to 18403 proteins in 2616 species: Archae - 518; Bacteria - 11662; Metazoa - 253; Fungi - 80; Plants - 1043; Viruses - 12; Other Eukaryotes - 4846 (source: NCBI BLink). & (gnl|cdd|36642 : 387.0) no description available & (gnl|cdd|84032 : 252.0) no description available & (reliability: 1510.0) & (original description: Putative AXS1, Description = UDP-D-apiose/UDP-D-xylose synthase 1, PFAM = PF01370)' T '10.1.3' 'cell wall.precursor synthesis.AXS' 'niben101scf02252_163508-169208' '(at1g08200 : 736.0) Encodes a putative UDP-D-apiose/UPD-D-xylose synthetase.; UDP-D-apiose/UDP-D-xylose synthase 2 (AXS2); FUNCTIONS IN: UDP-glucuronate decarboxylase activity; INVOLVED IN: nucleotide-sugar biosynthetic process; LOCATED IN: apoplast, cytoplasm; EXPRESSED IN: fruit, guard cell, cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-D-apiose/UDP-D-xylose synthase 1 (TAIR:AT2G27860.1); Has 18414 Blast hits to 18403 proteins in 2616 species: Archae - 518; Bacteria - 11662; Metazoa - 253; Fungi - 80; Plants - 1043; Viruses - 12; Other Eukaryotes - 4846 (source: NCBI BLink). & (gnl|cdd|36642 : 384.0) no description available & (gnl|cdd|84032 : 262.0) no description available & (reliability: 1472.0) & (original description: Putative AXS1, Description = UDP-D-apiose/UDP-D-xylose synthase, PFAM = PF01370)' T '10.1.3' 'cell wall.precursor synthesis.AXS' 'niben101scf03862_361409-366264' '(at1g08200 : 755.0) Encodes a putative UDP-D-apiose/UPD-D-xylose synthetase.; UDP-D-apiose/UDP-D-xylose synthase 2 (AXS2); FUNCTIONS IN: UDP-glucuronate decarboxylase activity; INVOLVED IN: nucleotide-sugar biosynthetic process; LOCATED IN: apoplast, cytoplasm; EXPRESSED IN: fruit, guard cell, cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-D-apiose/UDP-D-xylose synthase 1 (TAIR:AT2G27860.1); Has 18414 Blast hits to 18403 proteins in 2616 species: Archae - 518; Bacteria - 11662; Metazoa - 253; Fungi - 80; Plants - 1043; Viruses - 12; Other Eukaryotes - 4846 (source: NCBI BLink). & (gnl|cdd|36642 : 387.0) no description available & (gnl|cdd|84032 : 256.0) no description available & (reliability: 1510.0) & (original description: Putative AXS1, Description = UDP-D-apiose/UDP-D-xylose synthase 1, PFAM = PF01370)' T '10.1.3' 'cell wall.precursor synthesis.AXS' 'niben101scf03973_152509-158612' '(at1g08200 : 755.0) Encodes a putative UDP-D-apiose/UPD-D-xylose synthetase.; UDP-D-apiose/UDP-D-xylose synthase 2 (AXS2); FUNCTIONS IN: UDP-glucuronate decarboxylase activity; INVOLVED IN: nucleotide-sugar biosynthetic process; LOCATED IN: apoplast, cytoplasm; EXPRESSED IN: fruit, guard cell, cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-D-apiose/UDP-D-xylose synthase 1 (TAIR:AT2G27860.1); Has 18414 Blast hits to 18403 proteins in 2616 species: Archae - 518; Bacteria - 11662; Metazoa - 253; Fungi - 80; Plants - 1043; Viruses - 12; Other Eukaryotes - 4846 (source: NCBI BLink). & (gnl|cdd|36642 : 385.0) no description available & (gnl|cdd|84032 : 257.0) no description available & (reliability: 1510.0) & (original description: Putative UAXs, Description = UDP-apiose/xylose synthase, PFAM = PF01370)' T '10.1.3' 'cell wall.precursor synthesis.AXS' 'niben101scf06081_345628-354280' '(at1g08200 : 733.0) Encodes a putative UDP-D-apiose/UPD-D-xylose synthetase.; UDP-D-apiose/UDP-D-xylose synthase 2 (AXS2); FUNCTIONS IN: UDP-glucuronate decarboxylase activity; INVOLVED IN: nucleotide-sugar biosynthetic process; LOCATED IN: apoplast, cytoplasm; EXPRESSED IN: fruit, guard cell, cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-D-apiose/UDP-D-xylose synthase 1 (TAIR:AT2G27860.1); Has 18414 Blast hits to 18403 proteins in 2616 species: Archae - 518; Bacteria - 11662; Metazoa - 253; Fungi - 80; Plants - 1043; Viruses - 12; Other Eukaryotes - 4846 (source: NCBI BLink). & (gnl|cdd|36642 : 382.0) no description available & (gnl|cdd|84032 : 263.0) no description available & (reliability: 1466.0) & (original description: Putative AXS1, Description = UDP-D-apiose/UDP-D-xylose synthase, PFAM = PF01370)' T '10.1.4' 'cell wall.precursor synthesis.UDP-Glc dehydrogenase (UGD)' 'nbv0.3scaffold1712_40655-44094' '(gnl|cdd|37877 : 930.0) no description available & (at5g15490 : 917.0) UDP-glucose 6-dehydrogenase family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cytosol, cell wall, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, N-terminal (InterPro:IPR001732), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose/GDP-mannose dehydrogenase, dimerisation (InterPro:IPR014026), Nucleotide sugar dehydrogenase (InterPro:IPR017476); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT3G29360.2); Has 13373 Blast hits to 13344 proteins in 2170 species: Archae - 309; Bacteria - 7111; Metazoa - 214; Fungi - 99; Plants - 213; Viruses - 14; Other Eukaryotes - 5413 (source: NCBI BLink). & (q96558|ugdh_soybn : 915.0) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) - Glycine max (Soybean) & (gnl|cdd|31208 : 354.0) no description available & (reliability: 1834.0) & (original description: Putative UGD2, Description = UDP-glucose 6-dehydrogenase 2, PFAM = PF03720;PF03721;PF00984)' T '10.1.4' 'cell wall.precursor synthesis.UDP-Glc dehydrogenase (UGD)' 'niben044scf00039500ctg001_1119-4558' '(gnl|cdd|37877 : 921.0) no description available & (at5g15490 : 915.0) UDP-glucose 6-dehydrogenase family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cytosol, cell wall, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, N-terminal (InterPro:IPR001732), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose/GDP-mannose dehydrogenase, dimerisation (InterPro:IPR014026), Nucleotide sugar dehydrogenase (InterPro:IPR017476); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT3G29360.2); Has 13373 Blast hits to 13344 proteins in 2170 species: Archae - 309; Bacteria - 7111; Metazoa - 214; Fungi - 99; Plants - 213; Viruses - 14; Other Eukaryotes - 5413 (source: NCBI BLink). & (q96558|ugdh_soybn : 910.0) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) - Glycine max (Soybean) & (gnl|cdd|31208 : 356.0) no description available & (reliability: 1830.0) & (original description: Putative UGD3, Description = UDP-glucose 6-dehydrogenase 3, PFAM = PF03721;PF00984;PF03720)' T '10.1.4' 'cell wall.precursor synthesis.UDP-Glc dehydrogenase (UGD)' 'niben101scf03819_147537-150976' '(gnl|cdd|37877 : 927.0) no description available & (at5g15490 : 923.0) UDP-glucose 6-dehydrogenase family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cytosol, cell wall, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, N-terminal (InterPro:IPR001732), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose/GDP-mannose dehydrogenase, dimerisation (InterPro:IPR014026), Nucleotide sugar dehydrogenase (InterPro:IPR017476); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT3G29360.2); Has 13373 Blast hits to 13344 proteins in 2170 species: Archae - 309; Bacteria - 7111; Metazoa - 214; Fungi - 99; Plants - 213; Viruses - 14; Other Eukaryotes - 5413 (source: NCBI BLink). & (q96558|ugdh_soybn : 919.0) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) - Glycine max (Soybean) & (gnl|cdd|31208 : 359.0) no description available & (reliability: 1846.0) & (original description: Putative UGD3, Description = UDP-glucose 6-dehydrogenase 3, PFAM = PF00984;PF03720;PF03721)' T '10.1.4' 'cell wall.precursor synthesis.UDP-Glc dehydrogenase (UGD)' 'niben101scf08002_235828-239267' '(gnl|cdd|37877 : 925.0) no description available & (at5g15490 : 921.0) UDP-glucose 6-dehydrogenase family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cytosol, cell wall, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, N-terminal (InterPro:IPR001732), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose/GDP-mannose dehydrogenase, dimerisation (InterPro:IPR014026), Nucleotide sugar dehydrogenase (InterPro:IPR017476); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT3G29360.2); Has 13373 Blast hits to 13344 proteins in 2170 species: Archae - 309; Bacteria - 7111; Metazoa - 214; Fungi - 99; Plants - 213; Viruses - 14; Other Eukaryotes - 5413 (source: NCBI BLink). & (q96558|ugdh_soybn : 916.0) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) - Glycine max (Soybean) & (gnl|cdd|31208 : 356.0) no description available & (reliability: 1842.0) & (original description: Putative ugdh, Description = UDP-glucose 6-dehydrogenase, PFAM = PF00984;PF03720;PF03721)' T '10.1.4' 'cell wall.precursor synthesis.UDP-Glc dehydrogenase (UGD)' 'niben101scf08721_123274-126713' '(gnl|cdd|37877 : 901.0) no description available & (q96558|ugdh_soybn : 883.0) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) - Glycine max (Soybean) & (at3g29360 : 875.0) UDP-glucose 6-dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, N-terminal (InterPro:IPR001732), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose/GDP-mannose dehydrogenase, dimerisation (InterPro:IPR014026), Nucleotide sugar dehydrogenase (InterPro:IPR017476); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT5G39320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|31208 : 351.0) no description available & (reliability: 1750.0) & (original description: Putative kiwi, Description = UDP-glucose 6-dehydrogenase, PFAM = PF03720;PF00984;PF03721)' T '10.1.4' 'cell wall.precursor synthesis.UDP-Glc dehydrogenase (UGD)' 'niben101scf09554_54814-58253' '(gnl|cdd|37877 : 931.0) no description available & (at3g29360 : 916.0) UDP-glucose 6-dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, N-terminal (InterPro:IPR001732), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose/GDP-mannose dehydrogenase, dimerisation (InterPro:IPR014026), Nucleotide sugar dehydrogenase (InterPro:IPR017476); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT5G39320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q96558|ugdh_soybn : 914.0) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) - Glycine max (Soybean) & (gnl|cdd|31208 : 354.0) no description available & (reliability: 1832.0) & (original description: Putative UGD2, Description = UDP-glucose 6-dehydrogenase 2, PFAM = PF03721;PF00984;PF03720)' T '10.1.4' 'cell wall.precursor synthesis.UDP-Glc dehydrogenase (UGD)' 'niben101scf11806_33929-37368' '(gnl|cdd|37877 : 904.0) no description available & (q96558|ugdh_soybn : 888.0) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) - Glycine max (Soybean) & (at3g29360 : 877.0) UDP-glucose 6-dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, N-terminal (InterPro:IPR001732), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose/GDP-mannose dehydrogenase, dimerisation (InterPro:IPR014026), Nucleotide sugar dehydrogenase (InterPro:IPR017476); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT5G39320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|31208 : 352.0) no description available & (reliability: 1754.0) & (original description: Putative UGD1, Description = UDP-glucose 6-dehydrogenase 1, PFAM = PF03721;PF03720;PF00984)' T '10.1.5' 'cell wall.precursor synthesis.UXS' 'nbv0.5scaffold7595_1-3230' '(at3g46440 : 602.0) encodes a protein similar to UDP-glucuronic acid decarboxylase. UDP-glucuronic acid decarboxylase produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.; UDP-XYL synthase 5 (UXS5); FUNCTIONS IN: UDP-glucuronate decarboxylase activity, catalytic activity; INVOLVED IN: nucleotide-sugar metabolic process, D-xylose metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-glucuronic acid decarboxylase 3 (TAIR:AT5G59290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36642 : 525.0) no description available & (gnl|cdd|30800 : 210.0) no description available & (q2r1v8|gme2_orysa : 112.0) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (GDP-Man 3,5-epimerase 2) - Oryza sativa (Rice) & (reliability: 1204.0) & (original description: Putative rfbB, Description = NAD-dependent epimerase/dehydratase, PFAM = PF16363)' T '10.1.5' 'cell wall.precursor synthesis.UXS' 'niben101scf00059_252207-263947' '(at3g53520 : 655.0) Encodes an isoform of UDP-glucuronic acid decarboxylase, which is predicted to be membrane-bound by PSORT analysis. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.; UDP-glucuronic acid decarboxylase 1 (UXS1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-xylose synthase 4 (TAIR:AT2G47650.2). & (gnl|cdd|36642 : 542.0) no description available & (gnl|cdd|30800 : 216.0) no description available & (q338b5|gme1_orysa : 99.0) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man 3,5-epimerase 1) (OsGME-1) - Oryza sativa (Rice) & (reliability: 1310.0) & (original description: Putative UXS1, Description = UDP-glucuronic acid decarboxylase 1, PFAM = PF16363)' T '10.1.5' 'cell wall.precursor synthesis.UXS' 'niben101scf00669_84515-94006' '(at3g53520 : 650.0) Encodes an isoform of UDP-glucuronic acid decarboxylase, which is predicted to be membrane-bound by PSORT analysis. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.; UDP-glucuronic acid decarboxylase 1 (UXS1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-xylose synthase 4 (TAIR:AT2G47650.2). & (gnl|cdd|36642 : 544.0) no description available & (gnl|cdd|30800 : 217.0) no description available & (q338b5|gme1_orysa : 103.0) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man 3,5-epimerase 1) (OsGME-1) - Oryza sativa (Rice) & (reliability: 1300.0) & (original description: Putative UXS1, Description = UDP-glucuronic acid decarboxylase 1, PFAM = PF16363)' T '10.1.5' 'cell wall.precursor synthesis.UXS' 'niben101scf05147_106488-114264' '(at2g47650 : 555.0) encodes a protein similar to UDP-glucuronic acid decarboxylase. UDP-glucuronic acid decarboxylase produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.; UDP-xylose synthase 4 (UXS4); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G62830.2). & (gnl|cdd|36642 : 484.0) no description available & (gnl|cdd|30800 : 166.0) no description available & (q2r1v8|gme2_orysa : 103.0) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (GDP-Man 3,5-epimerase 2) - Oryza sativa (Rice) & (reliability: 1110.0) & (original description: Putative rfbB, Description = UDP-glucuronic acid decarboxylase 1, PFAM = PF16363)' T '10.1.5' 'cell wall.precursor synthesis.UXS' 'niben101scf09403_47785-55838' '(at3g62830 : 716.0) encodes an isoform of UDP-glucuronic acid decarboxylase, which is predicted to be membrane-bound by PSORT. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.; UDP-GLUCURONIC ACID DECARBOXYLASE 2 (UXS2); FUNCTIONS IN: UDP-glucuronate decarboxylase activity, dTDP-glucose 4,6-dehydratase activity, catalytic activity; INVOLVED IN: dTDP-rhamnose biosynthetic process, nucleotide-sugar metabolic process, D-xylose metabolic process; LOCATED IN: plasma membrane, Golgi membrane, membrane; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-xylose synthase 4 (TAIR:AT2G47650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36642 : 554.0) no description available & (gnl|cdd|30800 : 205.0) no description available & (q338b5|gme1_orysa : 113.0) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man 3,5-epimerase 1) (OsGME-1) - Oryza sativa (Rice) & (reliability: 1432.0) & (original description: Putative UXS2, Description = UDP-glucuronic acid decarboxylase 2, PFAM = PF16363)' T '10.1.5' 'cell wall.precursor synthesis.UXS' 'niben101scf10015_24099-29198' '(at2g28760 : 589.0) UDP-XYL synthase 6 (UXS6); FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: cellular metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-XYL synthase 5 (TAIR:AT3G46440.2); Has 45408 Blast hits to 45356 proteins in 3037 species: Archae - 861; Bacteria - 26677; Metazoa - 782; Fungi - 385; Plants - 1435; Viruses - 88; Other Eukaryotes - 15180 (source: NCBI BLink). & (gnl|cdd|36642 : 528.0) no description available & (gnl|cdd|30800 : 210.0) no description available & (q2r1v8|gme2_orysa : 104.0) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (GDP-Man 3,5-epimerase 2) - Oryza sativa (Rice) & (reliability: 1178.0) & (original description: Putative UXS6, Description = UDP-glucuronic acid decarboxylase 6, PFAM = PF16363)' T '10.1.5' 'cell wall.precursor synthesis.UXS' 'niben101scf13118_119849-124599' '(at3g62830 : 692.0) encodes an isoform of UDP-glucuronic acid decarboxylase, which is predicted to be membrane-bound by PSORT. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.; UDP-GLUCURONIC ACID DECARBOXYLASE 2 (UXS2); FUNCTIONS IN: UDP-glucuronate decarboxylase activity, dTDP-glucose 4,6-dehydratase activity, catalytic activity; INVOLVED IN: dTDP-rhamnose biosynthetic process, nucleotide-sugar metabolic process, D-xylose metabolic process; LOCATED IN: plasma membrane, Golgi membrane, membrane; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-xylose synthase 4 (TAIR:AT2G47650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36642 : 553.0) no description available & (gnl|cdd|30800 : 209.0) no description available & (q338b5|gme1_orysa : 113.0) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man 3,5-epimerase 1) (OsGME-1) - Oryza sativa (Rice) & (reliability: 1384.0) & (original description: Putative rfbB, Description = dTDP-glucose 4,6-dehydratase, PFAM = PF16363)' T '10.1.6' 'cell wall.precursor synthesis.GAE' 'niben044scf00009218ctg007_4387-7818' '(at3g23820 : 631.0) UDP-D-glucuronate 4-epimerase; UDP-D-glucuronate 4-epimerase 6 (GAE6); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 39778 Blast hits to 39772 proteins in 2962 species: Archae - 777; Bacteria - 23781; Metazoa - 723; Fungi - 392; Plants - 1153; Viruses - 36; Other Eukaryotes - 12916 (source: NCBI BLink). & (gnl|cdd|36585 : 431.0) no description available & (gnl|cdd|30800 : 192.0) no description available & (q43070|gale1_pea : 95.9) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (reliability: 1262.0) & (original description: Putative GAE6, Description = UDP-glucuronate 4-epimerase 6, PFAM = PF16363)' T '10.1.6' 'cell wall.precursor synthesis.GAE' 'niben101scf00603_855575-858879' '(at4g00110 : 675.0) Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.; UDP-D-glucuronate 4-epimerase 3 (GAE3); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43399 Blast hits to 43389 proteins in 2971 species: Archae - 792; Bacteria - 26013; Metazoa - 773; Fungi - 412; Plants - 1214; Viruses - 37; Other Eukaryotes - 14158 (source: NCBI BLink). & (gnl|cdd|36585 : 438.0) no description available & (gnl|cdd|30800 : 200.0) no description available & (q43070|gale1_pea : 103.0) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (reliability: 1350.0) & (original description: Putative GAE3, Description = UDP-glucuronate 4-epimerase 3, PFAM = PF01370)' T '10.1.6' 'cell wall.precursor synthesis.GAE' 'niben101scf02104_188923-192679' '(at3g23820 : 628.0) UDP-D-glucuronate 4-epimerase; UDP-D-glucuronate 4-epimerase 6 (GAE6); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 39778 Blast hits to 39772 proteins in 2962 species: Archae - 777; Bacteria - 23781; Metazoa - 723; Fungi - 392; Plants - 1153; Viruses - 36; Other Eukaryotes - 12916 (source: NCBI BLink). & (gnl|cdd|36585 : 423.0) no description available & (gnl|cdd|30800 : 192.0) no description available & (q43070|gale1_pea : 97.8) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (reliability: 1256.0) & (original description: Putative GAE6, Description = UDP-glucuronate 4-epimerase 6, PFAM = PF16363)' T '10.1.6' 'cell wall.precursor synthesis.GAE' 'niben101scf02494_729488-732711' '(at4g00110 : 572.0) Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.; UDP-D-glucuronate 4-epimerase 3 (GAE3); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43399 Blast hits to 43389 proteins in 2971 species: Archae - 792; Bacteria - 26013; Metazoa - 773; Fungi - 412; Plants - 1214; Viruses - 37; Other Eukaryotes - 14158 (source: NCBI BLink). & (gnl|cdd|36585 : 432.0) no description available & (gnl|cdd|30800 : 195.0) no description available & (q43070|gale1_pea : 96.3) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (reliability: 1144.0) & (original description: Putative GAE3, Description = UDP-glucuronate 4-epimerase 3, PFAM = PF01370)' T '10.1.6' 'cell wall.precursor synthesis.GAE' 'niben101scf02569_120802-124136' '(at1g02000 : 579.0) UDP-D-glucuronate 4-epimerase; UDP-D-glucuronate 4-epimerase 2 (GAE2); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 3 (TAIR:AT4G00110.1); Has 43438 Blast hits to 43429 proteins in 2985 species: Archae - 785; Bacteria - 25993; Metazoa - 728; Fungi - 385; Plants - 1220; Viruses - 41; Other Eukaryotes - 14286 (source: NCBI BLink). & (gnl|cdd|36585 : 425.0) no description available & (gnl|cdd|30800 : 194.0) no description available & (q43070|gale1_pea : 87.8) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (reliability: 1158.0) & (original description: Putative GAE5, Description = UDP-glucuronate 4-epimerase 5, PFAM = PF01370)' T '10.1.6' 'cell wall.precursor synthesis.GAE' 'niben101scf05109_242928-246220' '(at4g30440 : 732.0) UDP-D-glucuronate 4-epimerase; UDP-D-glucuronate 4-epimerase 1 (GAE1); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43669 Blast hits to 43658 proteins in 3000 species: Archae - 796; Bacteria - 26151; Metazoa - 773; Fungi - 435; Plants - 1177; Viruses - 35; Other Eukaryotes - 14302 (source: NCBI BLink). & (gnl|cdd|36585 : 439.0) no description available & (gnl|cdd|30800 : 203.0) no description available & (q43070|gale1_pea : 99.8) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (reliability: 1464.0) & (original description: Putative GAE1, Description = UDP-glucuronate 4-epimerase 1, PFAM = PF16363)' T '10.1.6' 'cell wall.precursor synthesis.GAE' 'niben101scf05317_68577-71884' '(at4g00110 : 657.0) Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.; UDP-D-glucuronate 4-epimerase 3 (GAE3); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43399 Blast hits to 43389 proteins in 2971 species: Archae - 792; Bacteria - 26013; Metazoa - 773; Fungi - 412; Plants - 1214; Viruses - 37; Other Eukaryotes - 14158 (source: NCBI BLink). & (gnl|cdd|36585 : 438.0) no description available & (gnl|cdd|30800 : 201.0) no description available & (q43070|gale1_pea : 102.0) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (reliability: 1314.0) & (original description: Putative GAE3, Description = UDP-glucuronate 4-epimerase 3, PFAM = PF01370)' T '10.1.6' 'cell wall.precursor synthesis.GAE' 'niben101scf10608_403130-406479' '(at3g23820 : 631.0) UDP-D-glucuronate 4-epimerase; UDP-D-glucuronate 4-epimerase 6 (GAE6); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 39778 Blast hits to 39772 proteins in 2962 species: Archae - 777; Bacteria - 23781; Metazoa - 723; Fungi - 392; Plants - 1153; Viruses - 36; Other Eukaryotes - 12916 (source: NCBI BLink). & (gnl|cdd|36585 : 430.0) no description available & (gnl|cdd|30800 : 192.0) no description available & (q43070|gale1_pea : 95.1) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (reliability: 1262.0) & (original description: Putative GAE6, Description = UDP-glucuronate 4-epimerase 6, PFAM = PF16363)' T '10.1.6' 'cell wall.precursor synthesis.GAE' 'niben101scf11361_17204-20508' '(at4g00110 : 702.0) Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.; UDP-D-glucuronate 4-epimerase 3 (GAE3); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43399 Blast hits to 43389 proteins in 2971 species: Archae - 792; Bacteria - 26013; Metazoa - 773; Fungi - 412; Plants - 1214; Viruses - 37; Other Eukaryotes - 14158 (source: NCBI BLink). & (gnl|cdd|36585 : 444.0) no description available & (gnl|cdd|30800 : 199.0) no description available & (q43070|gale1_pea : 107.0) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (reliability: 1404.0) & (original description: Putative GAE3, Description = UDP-glucuronate 4-epimerase 3, PFAM = PF01370)' T '10.1.6' 'cell wall.precursor synthesis.GAE' 'niben101scf11408_261934-265211' '(at4g30440 : 749.0) UDP-D-glucuronate 4-epimerase; UDP-D-glucuronate 4-epimerase 1 (GAE1); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43669 Blast hits to 43658 proteins in 3000 species: Archae - 796; Bacteria - 26151; Metazoa - 773; Fungi - 435; Plants - 1177; Viruses - 35; Other Eukaryotes - 14302 (source: NCBI BLink). & (gnl|cdd|36585 : 427.0) no description available & (gnl|cdd|30800 : 201.0) no description available & (q43070|gale1_pea : 85.9) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (reliability: 1498.0) & (original description: Putative GAE1, Description = UDP-glucuronate 4-epimerase 1, PFAM = PF01370)' T '10.1.6' 'cell wall.precursor synthesis.GAE' 'niben101scf12414_56026-59249' '(at1g02000 : 588.0) UDP-D-glucuronate 4-epimerase; UDP-D-glucuronate 4-epimerase 2 (GAE2); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 3 (TAIR:AT4G00110.1); Has 43438 Blast hits to 43429 proteins in 2985 species: Archae - 785; Bacteria - 25993; Metazoa - 728; Fungi - 385; Plants - 1220; Viruses - 41; Other Eukaryotes - 14286 (source: NCBI BLink). & (gnl|cdd|36585 : 430.0) no description available & (gnl|cdd|30800 : 198.0) no description available & (q43070|gale1_pea : 94.4) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (reliability: 1176.0) & (original description: Putative uge, Description = Uridine diphosphate galacturonate 4-epimerase, PFAM = PF01370)' T '10.1.7' 'cell wall.precursor synthesis.GMD' 'niben044scf00022257ctg000_1-2724' '(at3g51160 : 657.0) Catalyzes the first step in the de novo synthesis of GDP-L-fucose.; MURUS 1 (MUR1); FUNCTIONS IN: GDP-mannose 4,6-dehydratase activity; INVOLVED IN: 'de novo' GDP-L-fucose biosynthetic process, unidimensional cell growth; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), GDP-mannose 4,6-dehydratase (InterPro:IPR006368); BEST Arabidopsis thaliana protein match is: GDP-D-mannose 4,6-dehydratase 1 (TAIR:AT5G66280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36586 : 579.0) no description available & (gnl|cdd|31286 : 498.0) no description available & (reliability: 1314.0) & (original description: Putative MUR1, Description = GDP-mannose 4,6 dehydratase 2, PFAM = PF16363)' T '10.1.7' 'cell wall.precursor synthesis.GMD' 'niben101scf03735_560296-563970' '(at3g51160 : 659.0) Catalyzes the first step in the de novo synthesis of GDP-L-fucose.; MURUS 1 (MUR1); FUNCTIONS IN: GDP-mannose 4,6-dehydratase activity; INVOLVED IN: 'de novo' GDP-L-fucose biosynthetic process, unidimensional cell growth; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), GDP-mannose 4,6-dehydratase (InterPro:IPR006368); BEST Arabidopsis thaliana protein match is: GDP-D-mannose 4,6-dehydratase 1 (TAIR:AT5G66280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36586 : 578.0) no description available & (gnl|cdd|31286 : 497.0) no description available & (reliability: 1318.0) & (original description: Putative MUR1, Description = GDP-mannose 4,6 dehydratase 2, PFAM = PF16363)' T '10.1.7' 'cell wall.precursor synthesis.GMD' 'niben101scf05201_606526-609498' '(at3g51160 : 657.0) Catalyzes the first step in the de novo synthesis of GDP-L-fucose.; MURUS 1 (MUR1); FUNCTIONS IN: GDP-mannose 4,6-dehydratase activity; INVOLVED IN: 'de novo' GDP-L-fucose biosynthetic process, unidimensional cell growth; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), GDP-mannose 4,6-dehydratase (InterPro:IPR006368); BEST Arabidopsis thaliana protein match is: GDP-D-mannose 4,6-dehydratase 1 (TAIR:AT5G66280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36586 : 586.0) no description available & (gnl|cdd|31286 : 501.0) no description available & (reliability: 1314.0) & (original description: Putative gmd, Description = GDP-mannose 4,6-dehydratase, PFAM = PF16363)' T '10.1.8' 'cell wall.precursor synthesis.GER' 'niben101scf03736_192858-195796' '(at1g17890 : 546.0) GER2; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: GDP-L-fucose biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1 (TAIR:AT1G73250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q67wr2|fcl1_orysa : 516.0) Probable GDP-L-fucose synthase 1 (EC 1.1.1.271) (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1) - Oryza sativa (Rice) & (gnl|cdd|36644 : 444.0) no description available & (gnl|cdd|85412 : 198.0) no description available & (reliability: 1092.0) & (original description: Putative GER2, Description = Putative GDP-L-fucose synthase 2, PFAM = PF01370)' T '10.1.8' 'cell wall.precursor synthesis.GER' 'niben101scf08538_194584-197522' '(at1g17890 : 545.0) GER2; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: GDP-L-fucose biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1 (TAIR:AT1G73250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q67wr2|fcl1_orysa : 511.0) Probable GDP-L-fucose synthase 1 (EC 1.1.1.271) (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1) - Oryza sativa (Rice) & (gnl|cdd|36644 : 443.0) no description available & (gnl|cdd|85412 : 199.0) no description available & (reliability: 1090.0) & (original description: Putative fcl, Description = GDP-L-fucose synthase, PFAM = PF01370)' T '10.1.9' 'cell wall.precursor synthesis.MUR4' 'nbv0.5scaffold5466_3257-131139' '(at1g30620 : 194.0) encodes a type-II membrane protein that catalyzes 4-epimerization of UDP-D-Xylose to UDP-L-Arabinose in vitro, the nucleotide sugar used by glycosyltransferases in the arabinosylation of cell wall polysaccharides and wall-resident proteoglycans.; MURUS 4 (MUR4); FUNCTIONS IN: UDP-arabinose 4-epimerase activity, catalytic activity; INVOLVED IN: plant-type cell wall biogenesis, arabinose biosynthetic process, nucleotide-sugar metabolic process; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose 4-epimerase (InterPro:IPR005886); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G20460.1); Has 42706 Blast hits to 42698 proteins in 2964 species: Archae - 775; Bacteria - 25859; Metazoa - 727; Fungi - 574; Plants - 1159; Viruses - 34; Other Eukaryotes - 13578 (source: NCBI BLink). & (q8h0b2|arae3_orysa : 193.0) Probable UDP-arabinose 4-epimerase 3 (EC 5.1.3.5) (UDP-D-xylose 4-epimerase 3) (UDP-galactose 4-epimerase-like protein 3) (OsUEL-3) - Oryza sativa (Rice) & (gnl|cdd|36585 : 148.0) no description available & (gnl|cdd|31284 : 146.0) no description available & (reliability: 388.0) & (original description: Putative galE, Description = UDP-glucose 4-epimerase, PFAM = PF16363)' T '10.1.9' 'cell wall.precursor synthesis.MUR4' 'niben101scf00271_601085-607392' '(at1g30620 : 743.0) encodes a type-II membrane protein that catalyzes 4-epimerization of UDP-D-Xylose to UDP-L-Arabinose in vitro, the nucleotide sugar used by glycosyltransferases in the arabinosylation of cell wall polysaccharides and wall-resident proteoglycans.; MURUS 4 (MUR4); FUNCTIONS IN: UDP-arabinose 4-epimerase activity, catalytic activity; INVOLVED IN: plant-type cell wall biogenesis, arabinose biosynthetic process, nucleotide-sugar metabolic process; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose 4-epimerase (InterPro:IPR005886); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G20460.1); Has 42706 Blast hits to 42698 proteins in 2964 species: Archae - 775; Bacteria - 25859; Metazoa - 727; Fungi - 574; Plants - 1159; Viruses - 34; Other Eukaryotes - 13578 (source: NCBI BLink). & (q8h0b2|arae3_orysa : 685.0) Probable UDP-arabinose 4-epimerase 3 (EC 5.1.3.5) (UDP-D-xylose 4-epimerase 3) (UDP-galactose 4-epimerase-like protein 3) (OsUEL-3) - Oryza sativa (Rice) & (gnl|cdd|36585 : 464.0) no description available & (gnl|cdd|31284 : 397.0) no description available & (reliability: 1486.0) & (original description: Putative MUR4, Description = UDP-arabinose 4-epimerase 1, PFAM = PF16363)' T '10.1.9' 'cell wall.precursor synthesis.MUR4' 'niben101scf03539_10375-12833' '(at1g30620 : 189.0) encodes a type-II membrane protein that catalyzes 4-epimerization of UDP-D-Xylose to UDP-L-Arabinose in vitro, the nucleotide sugar used by glycosyltransferases in the arabinosylation of cell wall polysaccharides and wall-resident proteoglycans.; MURUS 4 (MUR4); FUNCTIONS IN: UDP-arabinose 4-epimerase activity, catalytic activity; INVOLVED IN: plant-type cell wall biogenesis, arabinose biosynthetic process, nucleotide-sugar metabolic process; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose 4-epimerase (InterPro:IPR005886); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G20460.1); Has 42706 Blast hits to 42698 proteins in 2964 species: Archae - 775; Bacteria - 25859; Metazoa - 727; Fungi - 574; Plants - 1159; Viruses - 34; Other Eukaryotes - 13578 (source: NCBI BLink). & (q8h0b2|arae3_orysa : 187.0) Probable UDP-arabinose 4-epimerase 3 (EC 5.1.3.5) (UDP-D-xylose 4-epimerase 3) (UDP-galactose 4-epimerase-like protein 3) (OsUEL-3) - Oryza sativa (Rice) & (gnl|cdd|36585 : 143.0) no description available & (gnl|cdd|31284 : 141.0) no description available & (reliability: 378.0) & (original description: Putative galE, Description = UDP-glucose 4-epimerase, PFAM = PF16363)' T '10.1.9' 'cell wall.precursor synthesis.MUR4' 'niben101scf11138_229101-235138' '(at1g30620 : 737.0) encodes a type-II membrane protein that catalyzes 4-epimerization of UDP-D-Xylose to UDP-L-Arabinose in vitro, the nucleotide sugar used by glycosyltransferases in the arabinosylation of cell wall polysaccharides and wall-resident proteoglycans.; MURUS 4 (MUR4); FUNCTIONS IN: UDP-arabinose 4-epimerase activity, catalytic activity; INVOLVED IN: plant-type cell wall biogenesis, arabinose biosynthetic process, nucleotide-sugar metabolic process; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose 4-epimerase (InterPro:IPR005886); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G20460.1); Has 42706 Blast hits to 42698 proteins in 2964 species: Archae - 775; Bacteria - 25859; Metazoa - 727; Fungi - 574; Plants - 1159; Viruses - 34; Other Eukaryotes - 13578 (source: NCBI BLink). & (q8h930|arae1_orysa : 677.0) Probable UDP-arabinose 4-epimerase 1 (EC 5.1.3.5) (UDP-D-xylose 4-epimerase 1) (UDP-galactose 4-epimerase-like protein 1) (OsUEL-1) - Oryza sativa (Rice) & (gnl|cdd|36585 : 462.0) no description available & (gnl|cdd|31284 : 400.0) no description available & (reliability: 1474.0) & (original description: Putative MUR4, Description = UDP-arabinose 4-epimerase 1, PFAM = PF16363)' T '10.1.10' 'cell wall.precursor synthesis.RHM' 'nbv0.5scaffold5630_129692-133778' '(at1g78570 : 1235.0) Encodes a UDP-L-Rhamnose synthase involved in the biosynthesis of rhamnose, a major monosaccharide component of pectin. Catalyzes the conversion of UDP-D-Glc to UDP-L-Rha. The dehydrogenase domain of RHM1 was shown to catalyze the conversion of UDP-D-Glc to the reaction intermediate UDP-4-keto-6-deoxy-D-Glc using recombinant protein assay but the activity of the full-length protein was not determined as it could not be expressed in E. coli.; rhamnose biosynthesis 1 (RHM1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), dTDP-4-dehydrorhamnose reductase (InterPro:IPR005913); BEST Arabidopsis thaliana protein match is: rhamnose biosynthesis 3 (TAIR:AT3G14790.1); Has 54880 Blast hits to 54585 proteins in 3085 species: Archae - 917; Bacteria - 31981; Metazoa - 1168; Fungi - 566; Plants - 1527; Viruses - 106; Other Eukaryotes - 18615 (source: NCBI BLink). & (gnl|cdd|35966 : 534.0) no description available & (gnl|cdd|31285 : 384.0) no description available & (q8h0b6|arae2_orysa : 105.0) Probable UDP-arabinose 4-epimerase 2 (EC 5.1.3.5) (UDP-D-xylose 4-epimerase 2) (UDP-galactose 4-epimerase-like protein 2) (OsUEL-2) - Oryza sativa (Rice) & (reliability: 2470.0) & (original description: Putative RHM1, Description = Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1, PFAM = PF16363;PF04321)' T '10.1.10' 'cell wall.precursor synthesis.RHM' 'niben101scf00160_919301-923403' '(at1g78570 : 1246.0) Encodes a UDP-L-Rhamnose synthase involved in the biosynthesis of rhamnose, a major monosaccharide component of pectin. Catalyzes the conversion of UDP-D-Glc to UDP-L-Rha. The dehydrogenase domain of RHM1 was shown to catalyze the conversion of UDP-D-Glc to the reaction intermediate UDP-4-keto-6-deoxy-D-Glc using recombinant protein assay but the activity of the full-length protein was not determined as it could not be expressed in E. coli.; rhamnose biosynthesis 1 (RHM1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), dTDP-4-dehydrorhamnose reductase (InterPro:IPR005913); BEST Arabidopsis thaliana protein match is: rhamnose biosynthesis 3 (TAIR:AT3G14790.1); Has 54880 Blast hits to 54585 proteins in 3085 species: Archae - 917; Bacteria - 31981; Metazoa - 1168; Fungi - 566; Plants - 1527; Viruses - 106; Other Eukaryotes - 18615 (source: NCBI BLink). & (gnl|cdd|35966 : 526.0) no description available & (gnl|cdd|31285 : 376.0) no description available & (q8h0b6|arae2_orysa : 107.0) Probable UDP-arabinose 4-epimerase 2 (EC 5.1.3.5) (UDP-D-xylose 4-epimerase 2) (UDP-galactose 4-epimerase-like protein 2) (OsUEL-2) - Oryza sativa (Rice) & (reliability: 2492.0) & (original description: Putative RHM1, Description = Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1, PFAM = PF04321;PF16363)' T '10.1.10' 'cell wall.precursor synthesis.RHM' 'niben101scf01892_190630-194513' '(at1g78570 : 1242.0) Encodes a UDP-L-Rhamnose synthase involved in the biosynthesis of rhamnose, a major monosaccharide component of pectin. Catalyzes the conversion of UDP-D-Glc to UDP-L-Rha. The dehydrogenase domain of RHM1 was shown to catalyze the conversion of UDP-D-Glc to the reaction intermediate UDP-4-keto-6-deoxy-D-Glc using recombinant protein assay but the activity of the full-length protein was not determined as it could not be expressed in E. coli.; rhamnose biosynthesis 1 (RHM1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), dTDP-4-dehydrorhamnose reductase (InterPro:IPR005913); BEST Arabidopsis thaliana protein match is: rhamnose biosynthesis 3 (TAIR:AT3G14790.1); Has 54880 Blast hits to 54585 proteins in 3085 species: Archae - 917; Bacteria - 31981; Metazoa - 1168; Fungi - 566; Plants - 1527; Viruses - 106; Other Eukaryotes - 18615 (source: NCBI BLink). & (gnl|cdd|35966 : 529.0) no description available & (gnl|cdd|31285 : 376.0) no description available & (q8h0b6|arae2_orysa : 105.0) Probable UDP-arabinose 4-epimerase 2 (EC 5.1.3.5) (UDP-D-xylose 4-epimerase 2) (UDP-galactose 4-epimerase-like protein 2) (OsUEL-2) - Oryza sativa (Rice) & (reliability: 2484.0) & (original description: Putative RHM1, Description = Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1, PFAM = PF04321;PF16363)' T '10.1.10' 'cell wall.precursor synthesis.RHM' 'niben101scf01983_646145-651150' '(at1g78570 : 1240.0) Encodes a UDP-L-Rhamnose synthase involved in the biosynthesis of rhamnose, a major monosaccharide component of pectin. Catalyzes the conversion of UDP-D-Glc to UDP-L-Rha. The dehydrogenase domain of RHM1 was shown to catalyze the conversion of UDP-D-Glc to the reaction intermediate UDP-4-keto-6-deoxy-D-Glc using recombinant protein assay but the activity of the full-length protein was not determined as it could not be expressed in E. coli.; rhamnose biosynthesis 1 (RHM1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), dTDP-4-dehydrorhamnose reductase (InterPro:IPR005913); BEST Arabidopsis thaliana protein match is: rhamnose biosynthesis 3 (TAIR:AT3G14790.1); Has 54880 Blast hits to 54585 proteins in 3085 species: Archae - 917; Bacteria - 31981; Metazoa - 1168; Fungi - 566; Plants - 1527; Viruses - 106; Other Eukaryotes - 18615 (source: NCBI BLink). & (gnl|cdd|35966 : 537.0) no description available & (gnl|cdd|31285 : 384.0) no description available & (q8h0b6|arae2_orysa : 107.0) Probable UDP-arabinose 4-epimerase 2 (EC 5.1.3.5) (UDP-D-xylose 4-epimerase 2) (UDP-galactose 4-epimerase-like protein 2) (OsUEL-2) - Oryza sativa (Rice) & (reliability: 2480.0) & (original description: Putative NRS/ER, Description = Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase, PFAM = PF04321;PF16363)' T '10.1.10' 'cell wall.precursor synthesis.RHM' 'niben101scf08156_1019225-1024051' '(at1g78570 : 1086.0) Encodes a UDP-L-Rhamnose synthase involved in the biosynthesis of rhamnose, a major monosaccharide component of pectin. Catalyzes the conversion of UDP-D-Glc to UDP-L-Rha. The dehydrogenase domain of RHM1 was shown to catalyze the conversion of UDP-D-Glc to the reaction intermediate UDP-4-keto-6-deoxy-D-Glc using recombinant protein assay but the activity of the full-length protein was not determined as it could not be expressed in E. coli.; rhamnose biosynthesis 1 (RHM1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), dTDP-4-dehydrorhamnose reductase (InterPro:IPR005913); BEST Arabidopsis thaliana protein match is: rhamnose biosynthesis 3 (TAIR:AT3G14790.1); Has 54880 Blast hits to 54585 proteins in 3085 species: Archae - 917; Bacteria - 31981; Metazoa - 1168; Fungi - 566; Plants - 1527; Viruses - 106; Other Eukaryotes - 18615 (source: NCBI BLink). & (gnl|cdd|35966 : 475.0) no description available & (gnl|cdd|31285 : 373.0) no description available & (q8h0b2|arae3_orysa : 104.0) Probable UDP-arabinose 4-epimerase 3 (EC 5.1.3.5) (UDP-D-xylose 4-epimerase 3) (UDP-galactose 4-epimerase-like protein 3) (OsUEL-3) - Oryza sativa (Rice) & (reliability: 2172.0) & (original description: Putative rfbB, Description = dTDP-D-glucose 4,6-dehydratase, PFAM = PF16363;PF04321)' T '10.1.10' 'cell wall.precursor synthesis.RHM' 'niben101scf16022_537493-541551' '(at1g63000 : 538.0) nucleotide-rhamnose synthase/epimerase-reductase (NRS/ER); FUNCTIONS IN: UDP-4-keto-rhamnose-4-keto-reductase activity, dTDP-4-dehydrorhamnose reductase activity, UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity, dTDP-4-dehydrorhamnose 3,5-epimerase activity; INVOLVED IN: dTDP-rhamnose biosynthetic process, UDP-rhamnose biosynthetic process; LOCATED IN: soluble fraction, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), dTDP-4-dehydrorhamnose reductase (InterPro:IPR005913); BEST Arabidopsis thaliana protein match is: rhamnose biosynthesis 1 (TAIR:AT1G78570.1); Has 1363 Blast hits to 1363 proteins in 432 species: Archae - 58; Bacteria - 688; Metazoa - 9; Fungi - 22; Plants - 263; Viruses - 5; Other Eukaryotes - 318 (source: NCBI BLink). & (gnl|cdd|31288 : 83.8) no description available & (reliability: 1026.0) & (original description: Putative NRS/ER, Description = Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase, PFAM = PF04321)' T '10.1.11' 'cell wall.precursor synthesis.UER' 'niben101scf16022_537493-541551' '(at1g63000 : 538.0) nucleotide-rhamnose synthase/epimerase-reductase (NRS/ER); FUNCTIONS IN: UDP-4-keto-rhamnose-4-keto-reductase activity, dTDP-4-dehydrorhamnose reductase activity, UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity, dTDP-4-dehydrorhamnose 3,5-epimerase activity; INVOLVED IN: dTDP-rhamnose biosynthetic process, UDP-rhamnose biosynthetic process; LOCATED IN: soluble fraction, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), dTDP-4-dehydrorhamnose reductase (InterPro:IPR005913); BEST Arabidopsis thaliana protein match is: rhamnose biosynthesis 1 (TAIR:AT1G78570.1); Has 1363 Blast hits to 1363 proteins in 432 species: Archae - 58; Bacteria - 688; Metazoa - 9; Fungi - 22; Plants - 263; Viruses - 5; Other Eukaryotes - 318 (source: NCBI BLink). & (gnl|cdd|31288 : 83.8) no description available & (reliability: 1076.0) & (original description: Putative NRS/ER, Description = Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase, PFAM = PF04321)' T '10.1.12' 'cell wall.precursor synthesis.KDO pathway' '' '' '10.1.12.1' 'cell wall.precursor synthesis.KDO pathway.arabinose-5-phosphate isomerase' 'niben044scf00000264ctg011_12253-17737' '(at3g54690 : 494.0) Sugar isomerase (SIS) family protein; FUNCTIONS IN: isomerase activity, sugar binding; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: KpsF/GutQ (InterPro:IPR004800), Sugar isomerase (SIS) (InterPro:IPR001347), Cystathionine beta-synthase, core (InterPro:IPR000644); Has 8722 Blast hits to 8719 proteins in 1857 species: Archae - 184; Bacteria - 5776; Metazoa - 15; Fungi - 131; Plants - 43; Viruses - 2; Other Eukaryotes - 2571 (source: NCBI BLink). & (gnl|cdd|83570 : 196.0) no description available & (reliability: 988.0) & (original description: Putative SETH3, Description = Probable arabinose 5-phosphate isomerase, PFAM = PF01380;PF00571;PF00571)' T '10.1.12.1' 'cell wall.precursor synthesis.KDO pathway.arabinose-5-phosphate isomerase' 'niben101scf06687_214631-219932' '(at3g54690 : 492.0) Sugar isomerase (SIS) family protein; FUNCTIONS IN: isomerase activity, sugar binding; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: KpsF/GutQ (InterPro:IPR004800), Sugar isomerase (SIS) (InterPro:IPR001347), Cystathionine beta-synthase, core (InterPro:IPR000644); Has 8722 Blast hits to 8719 proteins in 1857 species: Archae - 184; Bacteria - 5776; Metazoa - 15; Fungi - 131; Plants - 43; Viruses - 2; Other Eukaryotes - 2571 (source: NCBI BLink). & (gnl|cdd|83570 : 198.0) no description available & (reliability: 984.0) & (original description: Putative SETH3, Description = Probable arabinose 5-phosphate isomerase, PFAM = PF01380;PF00571;PF00571)' T '10.1.12.2' 'cell wall.precursor synthesis.KDO pathway.KDO-8-Phosphate Synthase' 'niben044scf00003596ctg009_2803-7007' '(at1g79500 : 392.0) Encodes a protein with 3-deoxy-8-phosphooctulonate synthase (KDOP synthase) activity which is involved in the biosynthesis of KDO, a component of cell wall rhamnogalacturonan II.; AtkdsA1; FUNCTIONS IN: 3-deoxy-8-phosphooctulonate synthase activity; INVOLVED IN: metabolic process, rhamnogalacturonan II biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DAHP synthetase I/KDSA (InterPro:IPR006218), Aldolase-type TIM barrel (InterPro:IPR013785), 3-deoxy-8-phosphooctulonate synthase (InterPro:IPR006269); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT1G16340.3); Has 7662 Blast hits to 7660 proteins in 2049 species: Archae - 64; Bacteria - 4872; Metazoa - 4; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 2665 (source: NCBI BLink). & (o50044|kdsa_pea : 385.0) 2-dehydro-3-deoxyphosphooctonate aldolase (EC 2.5.1.55) (Phospho-2-dehydro-3-deoxyoctonate aldolase) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase) (KDO-8-phosphate synthetase) (KDO 8-P synthase) (KDOPS) - Pisum sativum (Garden & (gnl|cdd|81466 : 327.0) no description available & (reliability: 784.0) & (original description: Putative kdsA, Description = 3-deoxy-D-manno-2-octulosonic acid-8-phosphate, PFAM = PF00793)' T '10.1.12.2' 'cell wall.precursor synthesis.KDO pathway.KDO-8-Phosphate Synthase' 'niben044scf00011838ctg013_4024-12930' '(at1g79500 : 520.0) Encodes a protein with 3-deoxy-8-phosphooctulonate synthase (KDOP synthase) activity which is involved in the biosynthesis of KDO, a component of cell wall rhamnogalacturonan II.; AtkdsA1; FUNCTIONS IN: 3-deoxy-8-phosphooctulonate synthase activity; INVOLVED IN: metabolic process, rhamnogalacturonan II biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DAHP synthetase I/KDSA (InterPro:IPR006218), Aldolase-type TIM barrel (InterPro:IPR013785), 3-deoxy-8-phosphooctulonate synthase (InterPro:IPR006269); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT1G16340.3); Has 7662 Blast hits to 7660 proteins in 2049 species: Archae - 64; Bacteria - 4872; Metazoa - 4; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 2665 (source: NCBI BLink). & (o50044|kdsa_pea : 511.0) 2-dehydro-3-deoxyphosphooctonate aldolase (EC 2.5.1.55) (Phospho-2-dehydro-3-deoxyoctonate aldolase) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase) (KDO-8-phosphate synthetase) (KDO 8-P synthase) (KDOPS) - Pisum sativum (Garden & (gnl|cdd|81466 : 401.0) no description available & (reliability: 1040.0) & (original description: Putative kdsA, Description = 3-desoxy-D-manno octulosonic acid-8-phosphate synthase, PFAM = PF00793)' T '10.1.12.2' 'cell wall.precursor synthesis.KDO pathway.KDO-8-Phosphate Synthase' 'niben101scf01154_31253-35765' '(at1g79500 : 387.0) Encodes a protein with 3-deoxy-8-phosphooctulonate synthase (KDOP synthase) activity which is involved in the biosynthesis of KDO, a component of cell wall rhamnogalacturonan II.; AtkdsA1; FUNCTIONS IN: 3-deoxy-8-phosphooctulonate synthase activity; INVOLVED IN: metabolic process, rhamnogalacturonan II biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DAHP synthetase I/KDSA (InterPro:IPR006218), Aldolase-type TIM barrel (InterPro:IPR013785), 3-deoxy-8-phosphooctulonate synthase (InterPro:IPR006269); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT1G16340.3); Has 7662 Blast hits to 7660 proteins in 2049 species: Archae - 64; Bacteria - 4872; Metazoa - 4; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 2665 (source: NCBI BLink). & (o50044|kdsa_pea : 382.0) 2-dehydro-3-deoxyphosphooctonate aldolase (EC 2.5.1.55) (Phospho-2-dehydro-3-deoxyoctonate aldolase) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase) (KDO-8-phosphate synthetase) (KDO 8-P synthase) (KDOPS) - Pisum sativum (Garden & (gnl|cdd|81466 : 325.0) no description available & (reliability: 774.0) & (original description: Putative kdsA, Description = 3-deoxy-D-manno-2-octulosonic acid-8-phosphate, PFAM = PF00793)' T '10.1.12.3' 'cell wall.precursor synthesis.KDO pathway.KDO-8-Phosphate Phosphatase' '' '' '10.1.12.4' 'cell wall.precursor synthesis.KDO pathway.CMP-KDO Synthetase' 'nbv0.5scaffold5830_29456-33684' '(at1g53000 : 233.0) Encodes a putative CMP-KDO (3-deoxy-D-manno-octulosonate) synthetase.; KDSB; FUNCTIONS IN: 3-deoxy-manno-octulosonate cytidylyltransferase activity, nucleotidyltransferase activity; INVOLVED IN: lipopolysaccharide biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-deoxy-D-manno-octulosonate cytidylyltransferase (InterPro:IPR004528), Acylneuraminate cytidylyltransferase (InterPro:IPR003329); Has 7496 Blast hits to 7495 proteins in 1549 species: Archae - 38; Bacteria - 4007; Metazoa - 8; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 3395 (source: NCBI BLink). & (gnl|cdd|81599 : 181.0) no description available & (reliability: 466.0) & (original description: Putative cks, Description = 3-deoxy-manno-octulosonate cytidylyltransferase, PFAM = PF02348)' T '10.1.12.4' 'cell wall.precursor synthesis.KDO pathway.CMP-KDO Synthetase' 'niben044scf00013184ctg001_394-5769' '(at1g53000 : 433.0) Encodes a putative CMP-KDO (3-deoxy-D-manno-octulosonate) synthetase.; KDSB; FUNCTIONS IN: 3-deoxy-manno-octulosonate cytidylyltransferase activity, nucleotidyltransferase activity; INVOLVED IN: lipopolysaccharide biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-deoxy-D-manno-octulosonate cytidylyltransferase (InterPro:IPR004528), Acylneuraminate cytidylyltransferase (InterPro:IPR003329); Has 7496 Blast hits to 7495 proteins in 1549 species: Archae - 38; Bacteria - 4007; Metazoa - 8; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 3395 (source: NCBI BLink). & (gnl|cdd|81599 : 326.0) no description available & (reliability: 866.0) & (original description: Putative KDSB, Description = 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial, PFAM = PF02348)' T '10.1.12.4' 'cell wall.precursor synthesis.KDO pathway.CMP-KDO Synthetase' 'niben101scf04989_59524-87201' '(at1g53000 : 459.0) Encodes a putative CMP-KDO (3-deoxy-D-manno-octulosonate) synthetase.; KDSB; FUNCTIONS IN: 3-deoxy-manno-octulosonate cytidylyltransferase activity, nucleotidyltransferase activity; INVOLVED IN: lipopolysaccharide biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-deoxy-D-manno-octulosonate cytidylyltransferase (InterPro:IPR004528), Acylneuraminate cytidylyltransferase (InterPro:IPR003329); Has 7496 Blast hits to 7495 proteins in 1549 species: Archae - 38; Bacteria - 4007; Metazoa - 8; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 3395 (source: NCBI BLink). & (gnl|cdd|81599 : 321.0) no description available & (reliability: 918.0) & (original description: Putative KDSB, Description = 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial, PFAM = PF02348)' T '10.1.20' 'cell wall.precursor synthesis.phosphomannose isomerase' 'nbv0.5scaffold6466_14910-27421' '(at1g67070 : 495.0) Encodes a protein with phosphomannose isomerase activity that is involved in synthesis of ascorbic acid. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.; DARK INDUCIBLE 9 (DIN9); CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate isomerase (InterPro:IPR016305), Cupin, RmlC-type (InterPro:IPR011051), Mannose-6-phosphate isomerase, type I (InterPro:IPR001250), RmlC-like jelly roll fold (InterPro:IPR014710), Phosphomannose isomerase, type I, conserved site (InterPro:IPR018050); BEST Arabidopsis thaliana protein match is: Mannose-6-phosphate isomerase, type I (TAIR:AT3G02570.1); Has 2340 Blast hits to 2321 proteins in 789 species: Archae - 2; Bacteria - 1171; Metazoa - 570; Fungi - 215; Plants - 90; Viruses - 0; Other Eukaryotes - 292 (source: NCBI BLink). & (gnl|cdd|37968 : 480.0) no description available & (gnl|cdd|85328 : 328.0) no description available & (reliability: 990.0) & (original description: Putative PMI2, Description = Mannose-6-phosphate isomerase 2, PFAM = PF01238)' T '10.1.20' 'cell wall.precursor synthesis.phosphomannose isomerase' 'niben044scf00003816ctg015_25006-29912' '(at3g02570 : 507.0) Encodes a protein with phosphomannose isomerase activity.; MATERNAL EFFECT EMBRYO ARREST 31 (MEE31); CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate isomerase (InterPro:IPR016305), Cupin, RmlC-type (InterPro:IPR011051), Mannose-6-phosphate isomerase, type I (InterPro:IPR001250), RmlC-like jelly roll fold (InterPro:IPR014710), Phosphomannose isomerase, type I, conserved site (InterPro:IPR018050); BEST Arabidopsis thaliana protein match is: Mannose-6-phosphate isomerase, type I (TAIR:AT1G67070.1); Has 2386 Blast hits to 2370 proteins in 810 species: Archae - 2; Bacteria - 1207; Metazoa - 570; Fungi - 215; Plants - 91; Viruses - 0; Other Eukaryotes - 301 (source: NCBI BLink). & (gnl|cdd|37968 : 497.0) no description available & (gnl|cdd|85328 : 320.0) no description available & (reliability: 1014.0) & (original description: Putative PMI1, Description = Mannose-6-phosphate isomerase 1, PFAM = PF01238)' T '10.1.20' 'cell wall.precursor synthesis.phosphomannose isomerase' 'niben101scf00894_318918-329336' '(at3g02570 : 502.0) Encodes a protein with phosphomannose isomerase activity.; MATERNAL EFFECT EMBRYO ARREST 31 (MEE31); CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate isomerase (InterPro:IPR016305), Cupin, RmlC-type (InterPro:IPR011051), Mannose-6-phosphate isomerase, type I (InterPro:IPR001250), RmlC-like jelly roll fold (InterPro:IPR014710), Phosphomannose isomerase, type I, conserved site (InterPro:IPR018050); BEST Arabidopsis thaliana protein match is: Mannose-6-phosphate isomerase, type I (TAIR:AT1G67070.1); Has 2386 Blast hits to 2370 proteins in 810 species: Archae - 2; Bacteria - 1207; Metazoa - 570; Fungi - 215; Plants - 91; Viruses - 0; Other Eukaryotes - 301 (source: NCBI BLink). & (gnl|cdd|37968 : 496.0) no description available & (gnl|cdd|85328 : 322.0) no description available & (reliability: 1004.0) & (original description: Putative PMI1, Description = Mannose-6-phosphate isomerase 1, PFAM = PF01238)' T '10.1.20' 'cell wall.precursor synthesis.phosphomannose isomerase' 'niben101scf02381_377502-384930' '(at1g67070 : 499.0) Encodes a protein with phosphomannose isomerase activity that is involved in synthesis of ascorbic acid. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.; DARK INDUCIBLE 9 (DIN9); CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate isomerase (InterPro:IPR016305), Cupin, RmlC-type (InterPro:IPR011051), Mannose-6-phosphate isomerase, type I (InterPro:IPR001250), RmlC-like jelly roll fold (InterPro:IPR014710), Phosphomannose isomerase, type I, conserved site (InterPro:IPR018050); BEST Arabidopsis thaliana protein match is: Mannose-6-phosphate isomerase, type I (TAIR:AT3G02570.1); Has 2340 Blast hits to 2321 proteins in 789 species: Archae - 2; Bacteria - 1171; Metazoa - 570; Fungi - 215; Plants - 90; Viruses - 0; Other Eukaryotes - 292 (source: NCBI BLink). & (gnl|cdd|37968 : 491.0) no description available & (gnl|cdd|85328 : 312.0) no description available & (reliability: 998.0) & (original description: Putative PMI1, Description = Mannose-6-phosphate isomerase 1, PFAM = PF01238)' T '10.1.20' 'cell wall.precursor synthesis.phosphomannose isomerase' 'niben101scf03015_747331-754011' '(at1g67070 : 492.0) Encodes a protein with phosphomannose isomerase activity that is involved in synthesis of ascorbic acid. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.; DARK INDUCIBLE 9 (DIN9); CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate isomerase (InterPro:IPR016305), Cupin, RmlC-type (InterPro:IPR011051), Mannose-6-phosphate isomerase, type I (InterPro:IPR001250), RmlC-like jelly roll fold (InterPro:IPR014710), Phosphomannose isomerase, type I, conserved site (InterPro:IPR018050); BEST Arabidopsis thaliana protein match is: Mannose-6-phosphate isomerase, type I (TAIR:AT3G02570.1); Has 2340 Blast hits to 2321 proteins in 789 species: Archae - 2; Bacteria - 1171; Metazoa - 570; Fungi - 215; Plants - 90; Viruses - 0; Other Eukaryotes - 292 (source: NCBI BLink). & (gnl|cdd|37968 : 482.0) no description available & (gnl|cdd|85328 : 330.0) no description available & (reliability: 984.0) & (original description: Putative mpi, Description = Mannose-6-phosphate isomerase, PFAM = PF01238)' T '10.1.20' 'cell wall.precursor synthesis.phosphomannose isomerase' 'niben101scf10375_231513-246142' '(at3g02570 : 502.0) Encodes a protein with phosphomannose isomerase activity.; MATERNAL EFFECT EMBRYO ARREST 31 (MEE31); CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate isomerase (InterPro:IPR016305), Cupin, RmlC-type (InterPro:IPR011051), Mannose-6-phosphate isomerase, type I (InterPro:IPR001250), RmlC-like jelly roll fold (InterPro:IPR014710), Phosphomannose isomerase, type I, conserved site (InterPro:IPR018050); BEST Arabidopsis thaliana protein match is: Mannose-6-phosphate isomerase, type I (TAIR:AT1G67070.1); Has 2386 Blast hits to 2370 proteins in 810 species: Archae - 2; Bacteria - 1207; Metazoa - 570; Fungi - 215; Plants - 91; Viruses - 0; Other Eukaryotes - 301 (source: NCBI BLink). & (gnl|cdd|37968 : 492.0) no description available & (gnl|cdd|85328 : 322.0) no description available & (reliability: 1004.0) & (original description: Putative PMI1, Description = Mannose-6-phosphate isomerase 1, PFAM = PF01238)' T '10.1.21' 'cell wall.precursor synthesis.phosphomannomutase' 'niben101scf04895_36267-42144' '(at2g45790 : 426.0) encodes a phosphomannomutase, involved in ascorbate biosynthesis; phosphomannomutase (PMM); FUNCTIONS IN: protein binding, phosphomannomutase activity; INVOLVED IN: L-ascorbic acid biosynthetic process, response to salt stress, mannose biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic phosphomannomutase (InterPro:IPR005002), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379); Has 1083 Blast hits to 1081 proteins in 282 species: Archae - 1; Bacteria - 92; Metazoa - 201; Fungi - 171; Plants - 223; Viruses - 0; Other Eukaryotes - 395 (source: NCBI BLink). & (gnl|cdd|38399 : 389.0) no description available & (gnl|cdd|86298 : 349.0) no description available & (reliability: 852.0) & (original description: Putative pmm, Description = Phosphomannomutase, PFAM = PF03332)' T '10.1.21' 'cell wall.precursor synthesis.phosphomannomutase' 'niben101scf07459_126085-132534' '(at2g45790 : 427.0) encodes a phosphomannomutase, involved in ascorbate biosynthesis; phosphomannomutase (PMM); FUNCTIONS IN: protein binding, phosphomannomutase activity; INVOLVED IN: L-ascorbic acid biosynthetic process, response to salt stress, mannose biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic phosphomannomutase (InterPro:IPR005002), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379); Has 1083 Blast hits to 1081 proteins in 282 species: Archae - 1; Bacteria - 92; Metazoa - 201; Fungi - 171; Plants - 223; Viruses - 0; Other Eukaryotes - 395 (source: NCBI BLink). & (gnl|cdd|38399 : 392.0) no description available & (gnl|cdd|86298 : 351.0) no description available & (reliability: 854.0) & (original description: Putative pmm, Description = Phosphomannomutase, PFAM = PF03332)' T '10.1.30' 'cell wall.precursor synthesis.sugar kinases' '' '' '10.1.30.1' 'cell wall.precursor synthesis.sugar kinases.galacturonic acid kinase' 'nbv0.3scaffold31813_7274-18782' '(at3g10700 : 510.0) Encodes a GHMP kinase family protein that acts as a galacturonic acid-1-phosphate kinase that catalyzes the production of galacturonic acid-1-phosphate. This is a precursor of the important cell wall building block UDP-galacturonic acid. Based on gene trap line GT8007, the gene appears to be expressed in a petal and stamen-specific manner, between flower stages 8 to 11, however, later RT-qPCR analysis demonstrates that the transcript is present throughout the plant in all tissues tested.; galacturonic acid kinase (GalAK); FUNCTIONS IN: ATP binding, galactokinase activity, galacturonokinase activity; INVOLVED IN: carbohydrate phosphorylation, D-galacturonate metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galactokinase (InterPro:IPR000705), Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); Has 3493 Blast hits to 3446 proteins in 1360 species: Archae - 42; Bacteria - 2414; Metazoa - 241; Fungi - 181; Plants - 121; Viruses - 0; Other Eukaryotes - 494 (source: NCBI BLink). & (gnl|cdd|30502 : 183.0) no description available & (gnl|cdd|35850 : 168.0) no description available & (reliability: 1020.0) & (original description: Putative GALAK, Description = Galacturonokinase, PFAM = PF00288;PF08544)' T '10.1.30.1' 'cell wall.precursor synthesis.sugar kinases.galacturonic acid kinase' 'niben101scf03284_309346-322328' '(at3g10700 : 568.0) Encodes a GHMP kinase family protein that acts as a galacturonic acid-1-phosphate kinase that catalyzes the production of galacturonic acid-1-phosphate. This is a precursor of the important cell wall building block UDP-galacturonic acid. Based on gene trap line GT8007, the gene appears to be expressed in a petal and stamen-specific manner, between flower stages 8 to 11, however, later RT-qPCR analysis demonstrates that the transcript is present throughout the plant in all tissues tested.; galacturonic acid kinase (GalAK); FUNCTIONS IN: ATP binding, galactokinase activity, galacturonokinase activity; INVOLVED IN: carbohydrate phosphorylation, D-galacturonate metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galactokinase (InterPro:IPR000705), Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); Has 3493 Blast hits to 3446 proteins in 1360 species: Archae - 42; Bacteria - 2414; Metazoa - 241; Fungi - 181; Plants - 121; Viruses - 0; Other Eukaryotes - 494 (source: NCBI BLink). & (gnl|cdd|35850 : 208.0) no description available & (gnl|cdd|30502 : 205.0) no description available & (reliability: 1136.0) & (original description: Putative GALAK, Description = Galacturonokinase, PFAM = PF00288;PF10509;PF08544)' T '10.1.30.2' 'ell wall.precursor synthesis.sugar kinases.arabinose-1-kinase' 'nbv0.5scaffold52_112317-142131' '(at4g16130 : 1406.0) Similar to galactokinase.; arabinose kinase (ARA1); FUNCTIONS IN: L-arabinokinase activity, ATP binding, galactokinase activity; INVOLVED IN: arabinose metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Galactokinase, glycosyltransferase (InterPro:IPR012369), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Mevalonate/galactokinase family protein (TAIR:AT3G42850.1); Has 3503 Blast hits to 3497 proteins in 1405 species: Archae - 74; Bacteria - 2553; Metazoa - 183; Fungi - 124; Plants - 132; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|35850 : 381.0) no description available & (gnl|cdd|30502 : 116.0) no description available & (reliability: 2812.0) & (original description: Putative BnaC08g24480D, Description = BnaC08g24480D protein, PFAM = PF10509;PF13528;PF00288)' T '10.1.30.2' 'ell wall.precursor synthesis.sugar kinases.arabinose-1-kinase' 'nbv0.5scaffold82_15511-617401' '(at4g16130 : 457.0) Similar to galactokinase.; arabinose kinase (ARA1); FUNCTIONS IN: L-arabinokinase activity, ATP binding, galactokinase activity; INVOLVED IN: arabinose metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Galactokinase, glycosyltransferase (InterPro:IPR012369), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Mevalonate/galactokinase family protein (TAIR:AT3G42850.1); Has 3503 Blast hits to 3497 proteins in 1405 species: Archae - 74; Bacteria - 2553; Metazoa - 183; Fungi - 124; Plants - 132; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (reliability: 914.0) & (original description: Putative BnaC08g24480D, Description = BnaC08g24480D protein, PFAM = PF08544)' T '10.1.30.2' 'ell wall.precursor synthesis.sugar kinases.arabinose-1-kinase' 'niben044scf00023719ctg001_17798-25532' '(at4g16130 : 374.0) Similar to galactokinase.; arabinose kinase (ARA1); FUNCTIONS IN: L-arabinokinase activity, ATP binding, galactokinase activity; INVOLVED IN: arabinose metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Galactokinase, glycosyltransferase (InterPro:IPR012369), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Mevalonate/galactokinase family protein (TAIR:AT3G42850.1); Has 3503 Blast hits to 3497 proteins in 1405 species: Archae - 74; Bacteria - 2553; Metazoa - 183; Fungi - 124; Plants - 132; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|35850 : 130.0) no description available & (reliability: 748.0) & (original description: Putative ARA, Description = L-arabinokinase, PFAM = PF13528)' T '10.1.30.2' 'ell wall.precursor synthesis.sugar kinases.arabinose-1-kinase' 'niben044scf00043991ctg000_166-5723' '(at4g16130 : 620.0) Similar to galactokinase.; arabinose kinase (ARA1); FUNCTIONS IN: L-arabinokinase activity, ATP binding, galactokinase activity; INVOLVED IN: arabinose metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Galactokinase, glycosyltransferase (InterPro:IPR012369), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Mevalonate/galactokinase family protein (TAIR:AT3G42850.1); Has 3503 Blast hits to 3497 proteins in 1405 species: Archae - 74; Bacteria - 2553; Metazoa - 183; Fungi - 124; Plants - 132; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|30502 : 116.0) no description available & (reliability: 1240.0) & (original description: Putative BnaC08g24480D, Description = BnaC08g24480D protein, PFAM = PF08544;PF00288)' T '10.1.30.2' 'ell wall.precursor synthesis.sugar kinases.arabinose-1-kinase' 'niben101scf00087_58441-83535' '(at4g16130 : 1589.0) Similar to galactokinase.; arabinose kinase (ARA1); FUNCTIONS IN: L-arabinokinase activity, ATP binding, galactokinase activity; INVOLVED IN: arabinose metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Galactokinase, glycosyltransferase (InterPro:IPR012369), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Mevalonate/galactokinase family protein (TAIR:AT3G42850.1); Has 3503 Blast hits to 3497 proteins in 1405 species: Archae - 74; Bacteria - 2553; Metazoa - 183; Fungi - 124; Plants - 132; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|35850 : 424.0) no description available & (gnl|cdd|81444 : 129.0) no description available & (reliability: 3178.0) & (original description: Putative galK, Description = L-arabinokinase, PFAM = PF10509;PF00288;PF13528;PF08544)' T '10.1.30.2' 'ell wall.precursor synthesis.sugar kinases.arabinose-1-kinase' 'niben101scf00360_268896-293424' '(at4g16130 : 1597.0) Similar to galactokinase.; arabinose kinase (ARA1); FUNCTIONS IN: L-arabinokinase activity, ATP binding, galactokinase activity; INVOLVED IN: arabinose metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Galactokinase, glycosyltransferase (InterPro:IPR012369), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Mevalonate/galactokinase family protein (TAIR:AT3G42850.1); Has 3503 Blast hits to 3497 proteins in 1405 species: Archae - 74; Bacteria - 2553; Metazoa - 183; Fungi - 124; Plants - 132; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|35850 : 424.0) no description available & (gnl|cdd|30502 : 132.0) no description available & (reliability: 3194.0) & (original description: Putative ARA1, Description = L-arabinokinase, PFAM = PF13528;PF00288;PF10509;PF08544)' T '10.1.30.2' 'ell wall.precursor synthesis.sugar kinases.arabinose-1-kinase' 'niben101scf03540_33750-66975' '(at4g16130 : 1434.0) Similar to galactokinase.; arabinose kinase (ARA1); FUNCTIONS IN: L-arabinokinase activity, ATP binding, galactokinase activity; INVOLVED IN: arabinose metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Galactokinase, glycosyltransferase (InterPro:IPR012369), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Mevalonate/galactokinase family protein (TAIR:AT3G42850.1); Has 3503 Blast hits to 3497 proteins in 1405 species: Archae - 74; Bacteria - 2553; Metazoa - 183; Fungi - 124; Plants - 132; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|35850 : 383.0) no description available & (gnl|cdd|30502 : 116.0) no description available & (reliability: 2868.0) & (original description: Putative ARA1, Description = L-arabinokinase, PFAM = PF13528;PF00288;PF10509)' T '10.1.30.3' 'cell wall.precursor synthesis.sugar kinases.glucuronic acid kinase' 'nbv0.3scaffold36904_10986-16905' '(at3g01640 : 206.0) AtGlcAK is a sugar kinase able to phosphorylate D-GlcA to D-GlcA-1-phosphate in the presence of ATP.; glucuronokinase G (GLCAK); FUNCTIONS IN: poly(U) RNA binding, glucuronokinase activity, ATP binding; INVOLVED IN: cell wall biogenesis, inositol metabolic process, pollen tube development; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: GHMP kinase family protein (TAIR:AT5G14470.1); Has 420 Blast hits to 420 proteins in 152 species: Archae - 38; Bacteria - 195; Metazoa - 13; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative gkup, Description = GHMP kinase, PFAM = )' T '10.1.30.3' 'cell wall.precursor synthesis.sugar kinases.glucuronic acid kinase' 'niben044scf00031000ctg002_1-4550' '(at3g01640 : 463.0) AtGlcAK is a sugar kinase able to phosphorylate D-GlcA to D-GlcA-1-phosphate in the presence of ATP.; glucuronokinase G (GLCAK); FUNCTIONS IN: poly(U) RNA binding, glucuronokinase activity, ATP binding; INVOLVED IN: cell wall biogenesis, inositol metabolic process, pollen tube development; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: GHMP kinase family protein (TAIR:AT5G14470.1); Has 420 Blast hits to 420 proteins in 152 species: Archae - 38; Bacteria - 195; Metazoa - 13; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 926.0) & (original description: Putative GLAK2, Description = GLAK2, PFAM = PF00288)' T '10.1.30.3' 'cell wall.precursor synthesis.sugar kinases.glucuronic acid kinase' 'niben044scf00037492ctg003_2883-10031' '(at3g01640 : 181.0) AtGlcAK is a sugar kinase able to phosphorylate D-GlcA to D-GlcA-1-phosphate in the presence of ATP.; glucuronokinase G (GLCAK); FUNCTIONS IN: poly(U) RNA binding, glucuronokinase activity, ATP binding; INVOLVED IN: cell wall biogenesis, inositol metabolic process, pollen tube development; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: GHMP kinase family protein (TAIR:AT5G14470.1); Has 420 Blast hits to 420 proteins in 152 species: Archae - 38; Bacteria - 195; Metazoa - 13; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative gkup, Description = Glucuronokinase 1, PFAM = )' T '10.1.30.3' 'cell wall.precursor synthesis.sugar kinases.glucuronic acid kinase' 'niben101scf00046_289545-295464' '(at3g01640 : 345.0) AtGlcAK is a sugar kinase able to phosphorylate D-GlcA to D-GlcA-1-phosphate in the presence of ATP.; glucuronokinase G (GLCAK); FUNCTIONS IN: poly(U) RNA binding, glucuronokinase activity, ATP binding; INVOLVED IN: cell wall biogenesis, inositol metabolic process, pollen tube development; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: GHMP kinase family protein (TAIR:AT5G14470.1); Has 420 Blast hits to 420 proteins in 152 species: Archae - 38; Bacteria - 195; Metazoa - 13; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 690.0) & (original description: Putative gkup, Description = GHMP kinase, PFAM = PF00288)' T '10.1.30.3' 'cell wall.precursor synthesis.sugar kinases.glucuronic acid kinase' 'niben101scf03766_867968-874670' '(at3g01640 : 496.0) AtGlcAK is a sugar kinase able to phosphorylate D-GlcA to D-GlcA-1-phosphate in the presence of ATP.; glucuronokinase G (GLCAK); FUNCTIONS IN: poly(U) RNA binding, glucuronokinase activity, ATP binding; INVOLVED IN: cell wall biogenesis, inositol metabolic process, pollen tube development; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: GHMP kinase family protein (TAIR:AT5G14470.1); Has 420 Blast hits to 420 proteins in 152 species: Archae - 38; Bacteria - 195; Metazoa - 13; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 992.0) & (original description: Putative GLCAK1, Description = Glucuronokinase 1, PFAM = PF00288)' T '10.1.30.3' 'cell wall.precursor synthesis.sugar kinases.glucuronic acid kinase' 'niben101scf14755_110960-115000' '(at3g01640 : 171.0) AtGlcAK is a sugar kinase able to phosphorylate D-GlcA to D-GlcA-1-phosphate in the presence of ATP.; glucuronokinase G (GLCAK); FUNCTIONS IN: poly(U) RNA binding, glucuronokinase activity, ATP binding; INVOLVED IN: cell wall biogenesis, inositol metabolic process, pollen tube development; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: GHMP kinase family protein (TAIR:AT5G14470.1); Has 420 Blast hits to 420 proteins in 152 species: Archae - 38; Bacteria - 195; Metazoa - 13; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative MVK, Description = Glucuronokinase 1, PFAM = )' T '10.2' 'cell wall.cellulose synthesis' 'nbv0.3scaffold688_9364-13980' '(at4g07960 : 1052.0) encodes a gene similar to cellulose synthase; Cellulose-synthase-like C12 (CSLC12); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Cellulose-synthase-like C5 (TAIR:AT4G31590.1); Has 5318 Blast hits to 5313 proteins in 1549 species: Archae - 201; Bacteria - 4094; Metazoa - 52; Fungi - 109; Plants - 510; Viruses - 19; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|31408 : 140.0) no description available & (reliability: 2104.0) & (original description: Putative CSLC12, Description = Probable xyloglucan glycosyltransferase 12, PFAM = PF13641)' T '10.2' 'cell wall.cellulose synthesis' 'nbv0.3scaffold42143_11418-16506' '(at5g49720 : 929.0) Encodes a membrane-bound endo-1,4-beta-D-glucanase, involved in cellulose biosynthesis. Loss-of-function mutants have severe cellulose-deficient phenotypes. During cell elongation, KOR1 is associated with Golgi apparatus and early endosome. Inhibition of cellulose biosynthesis promoted a redistribution of KOR1 in subcellular locations. These observations suggest that deposition of cellulose involves the intracellular cycling of KOR1.; glycosyl hydrolase 9A1 (GH9A1); FUNCTIONS IN: cellulase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: in 6 processes; LOCATED IN: Golgi apparatus, plasma membrane, cell plate, early endosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9A3 (TAIR:AT4G24260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p0c1u4|gun9_orysa : 891.0) Endoglucanase 9 (EC 3.2.1.4) (Endo-1,4-beta glucanase 9) (OsGLU1) - Oryza sativa (Rice) & (gnl|cdd|85009 : 454.0) no description available & (reliability: 1858.0) & (original description: Putative KOR, Description = Endoglucanase 25, PFAM = PF00759)' T '10.2' 'cell wall.cellulose synthesis' 'nbv0.3scaffold48664_1971-6647' '(at4g07960 : 1027.0) encodes a gene similar to cellulose synthase; Cellulose-synthase-like C12 (CSLC12); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Cellulose-synthase-like C5 (TAIR:AT4G31590.1); Has 5318 Blast hits to 5313 proteins in 1549 species: Archae - 201; Bacteria - 4094; Metazoa - 52; Fungi - 109; Plants - 510; Viruses - 19; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|31408 : 135.0) no description available & (reliability: 2054.0) & (original description: Putative CSLC3, Description = Cellulose synthase-like family C3 protein, PFAM = PF13641)' T '10.2' 'cell wall.cellulose synthesis' 'niben044scf00008093ctg005_1-2069' '(at3g07330 : 270.0) encodes a gene similar to cellulose synthase; Cellulose-synthase-like C6 (CSLC6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: pollen tube development; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Glycosyl transferase family 2 protein (TAIR:AT2G24630.1); Has 4986 Blast hits to 4983 proteins in 1463 species: Archae - 182; Bacteria - 3875; Metazoa - 9; Fungi - 97; Plants - 510; Viruses - 14; Other Eukaryotes - 299 (source: NCBI BLink). & (reliability: 540.0) & (original description: Putative CSLC2, Description = Xyloglucan glycosyltransferase, PFAM = )' T '10.2' 'cell wall.cellulose synthesis' 'niben044scf00014844ctg024_21161-26262' '(at5g49720 : 887.0) Encodes a membrane-bound endo-1,4-beta-D-glucanase, involved in cellulose biosynthesis. Loss-of-function mutants have severe cellulose-deficient phenotypes. During cell elongation, KOR1 is associated with Golgi apparatus and early endosome. Inhibition of cellulose biosynthesis promoted a redistribution of KOR1 in subcellular locations. These observations suggest that deposition of cellulose involves the intracellular cycling of KOR1.; glycosyl hydrolase 9A1 (GH9A1); FUNCTIONS IN: cellulase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: in 6 processes; LOCATED IN: Golgi apparatus, plasma membrane, cell plate, early endosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9A3 (TAIR:AT4G24260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p0c1u4|gun9_orysa : 845.0) Endoglucanase 9 (EC 3.2.1.4) (Endo-1,4-beta glucanase 9) (OsGLU1) - Oryza sativa (Rice) & (gnl|cdd|85009 : 451.0) no description available & (reliability: 1774.0) & (original description: Putative KOR, Description = Endoglucanase 25, PFAM = PF00759)' T '10.2' 'cell wall.cellulose synthesis' 'niben044scf00017685ctg008_5306-9641' '(at5g03760 : 511.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1022.0) & (original description: Putative cslA1, Description = Cellulose synthase-like protein A1, PFAM = PF13632)' T '10.2' 'cell wall.cellulose synthesis' 'niben044scf00028575ctg004_31309-35981' '(q7xuk4|gun12_orysa : 375.0) Endoglucanase 12 (EC 3.2.1.4) (Endo-1,4-beta glucanase 12) (OsGLU3) - Oryza sativa (Rice) & (at1g65610 : 360.0) KORRIGAN 2 (KOR2); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, sepal, root, leaf, stamen; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9A1 (TAIR:AT5G49720.1); Has 1630 Blast hits to 1606 proteins in 228 species: Archae - 2; Bacteria - 483; Metazoa - 181; Fungi - 17; Plants - 907; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|85009 : 353.0) no description available & (reliability: 690.0) & (original description: Putative CEL, Description = Endoglucanase, PFAM = PF00759)' T '10.2' 'cell wall.cellulose synthesis' 'niben044scf00031498ctg000_1862-9860' '(at3g07330 : 715.0) encodes a gene similar to cellulose synthase; Cellulose-synthase-like C6 (CSLC6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: pollen tube development; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Glycosyl transferase family 2 protein (TAIR:AT2G24630.1); Has 4986 Blast hits to 4983 proteins in 1463 species: Archae - 182; Bacteria - 3875; Metazoa - 9; Fungi - 97; Plants - 510; Viruses - 14; Other Eukaryotes - 299 (source: NCBI BLink). & (gnl|cdd|31408 : 128.0) no description available & (reliability: 1430.0) & (original description: Putative cslA1, Description = Xyloglucan glycosyltransferase, PFAM = PF13641)' T '10.2' 'cell wall.cellulose synthesis' 'niben044scf00039134ctg000_7685-13282' '(at4g31590 : 1004.0) encodes a gene similar to cellulose synthase; Cellulose-synthase-like C5 (CSLC5); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Glycosyl transferase family 2 protein (TAIR:AT2G24630.1); Has 5645 Blast hits to 5642 proteins in 1596 species: Archae - 219; Bacteria - 4417; Metazoa - 64; Fungi - 93; Plants - 510; Viruses - 16; Other Eukaryotes - 326 (source: NCBI BLink). & (gnl|cdd|31408 : 140.0) no description available & (reliability: 2008.0) & (original description: Putative CSLC5, Description = Probable xyloglucan glycosyltransferase 5, PFAM = PF13632)' T '10.2' 'cell wall.cellulose synthesis' 'niben101scf00905_617005-623028' '(at4g31590 : 1022.0) encodes a gene similar to cellulose synthase; Cellulose-synthase-like C5 (CSLC5); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Glycosyl transferase family 2 protein (TAIR:AT2G24630.1); Has 5645 Blast hits to 5642 proteins in 1596 species: Archae - 219; Bacteria - 4417; Metazoa - 64; Fungi - 93; Plants - 510; Viruses - 16; Other Eukaryotes - 326 (source: NCBI BLink). & (gnl|cdd|31408 : 140.0) no description available & (reliability: 2044.0) & (original description: Putative CSLC5, Description = Probable xyloglucan glycosyltransferase 5, PFAM = PF13632)' T '10.2' 'cell wall.cellulose synthesis' 'niben101scf01108_679082-685651' '(at5g22740 : 778.0) encodes a beta-mannan synthase based on in vitro enzyme assays from heterologously expressed protein; cellulose synthase-like A02 (CSLA02); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT5G03760.1); Has 5133 Blast hits to 5129 proteins in 1484 species: Archae - 200; Bacteria - 4017; Metazoa - 35; Fungi - 91; Plants - 482; Viruses - 11; Other Eukaryotes - 297 (source: NCBI BLink). & (gnl|cdd|31408 : 121.0) no description available & (reliability: 1556.0) & (original description: Putative CSLA2, Description = Glucomannan 4-beta-mannosyltransferase 2, PFAM = PF13632)' T '10.2' 'cell wall.cellulose synthesis' 'niben101scf01481_14812-22147' '(at5g03760 : 353.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 706.0) & (original description: Putative cslA1, Description = Cellulose synthase-like protein A1, PFAM = PF00535)' T '10.2' 'cell wall.cellulose synthesis' 'niben101scf02714_47807-55560' '(at5g49720 : 908.0) Encodes a membrane-bound endo-1,4-beta-D-glucanase, involved in cellulose biosynthesis. Loss-of-function mutants have severe cellulose-deficient phenotypes. During cell elongation, KOR1 is associated with Golgi apparatus and early endosome. Inhibition of cellulose biosynthesis promoted a redistribution of KOR1 in subcellular locations. These observations suggest that deposition of cellulose involves the intracellular cycling of KOR1.; glycosyl hydrolase 9A1 (GH9A1); FUNCTIONS IN: cellulase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: in 6 processes; LOCATED IN: Golgi apparatus, plasma membrane, cell plate, early endosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9A3 (TAIR:AT4G24260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p0c1u4|gun9_orysa : 864.0) Endoglucanase 9 (EC 3.2.1.4) (Endo-1,4-beta glucanase 9) (OsGLU1) - Oryza sativa (Rice) & (gnl|cdd|85009 : 455.0) no description available & (reliability: 1816.0) & (original description: Putative KOR, Description = Endoglucanase 25, PFAM = PF00759)' T '10.2' 'cell wall.cellulose synthesis' 'niben101scf03753_13711-19065' '(at5g49720 : 932.0) Encodes a membrane-bound endo-1,4-beta-D-glucanase, involved in cellulose biosynthesis. Loss-of-function mutants have severe cellulose-deficient phenotypes. During cell elongation, KOR1 is associated with Golgi apparatus and early endosome. Inhibition of cellulose biosynthesis promoted a redistribution of KOR1 in subcellular locations. These observations suggest that deposition of cellulose involves the intracellular cycling of KOR1.; glycosyl hydrolase 9A1 (GH9A1); FUNCTIONS IN: cellulase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: in 6 processes; LOCATED IN: Golgi apparatus, plasma membrane, cell plate, early endosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9A3 (TAIR:AT4G24260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p0c1u4|gun9_orysa : 894.0) Endoglucanase 9 (EC 3.2.1.4) (Endo-1,4-beta glucanase 9) (OsGLU1) - Oryza sativa (Rice) & (gnl|cdd|85009 : 452.0) no description available & (reliability: 1864.0) & (original description: Putative KOR, Description = Endoglucanase 25, PFAM = PF00759)' T '10.2' 'cell wall.cellulose synthesis' 'niben101scf03991_4387-12493' '(at5g03760 : 905.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|31408 : 124.0) no description available & (reliability: 1810.0) & (original description: Putative ManS, Description = Mannan synthase 1, PFAM = PF13641)' T '10.2' 'cell wall.cellulose synthesis' 'niben101scf04626_165875-170527' '(at3g28180 : 929.0) encodes a gene similar to cellulose synthase; Cellulose-synthase-like C4 (CSLC04); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Cellulose-synthase-like C5 (TAIR:AT4G31590.1); Has 5595 Blast hits to 5589 proteins in 1569 species: Archae - 192; Bacteria - 4449; Metazoa - 13; Fungi - 97; Plants - 511; Viruses - 16; Other Eukaryotes - 317 (source: NCBI BLink). & (gnl|cdd|31408 : 148.0) no description available & (reliability: 1858.0) & (original description: Putative cslA1, Description = Xyloglucan glycosyltransferase, PFAM = PF13632)' T '10.2' 'cell wall.cellulose synthesis' 'niben101scf04700_789917-794593' '(at4g07960 : 1028.0) encodes a gene similar to cellulose synthase; Cellulose-synthase-like C12 (CSLC12); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Cellulose-synthase-like C5 (TAIR:AT4G31590.1); Has 5318 Blast hits to 5313 proteins in 1549 species: Archae - 201; Bacteria - 4094; Metazoa - 52; Fungi - 109; Plants - 510; Viruses - 19; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|31408 : 134.0) no description available & (reliability: 2056.0) & (original description: Putative CSLC12, Description = Probable xyloglucan glycosyltransferase 12, PFAM = PF13641)' T '10.2' 'cell wall.cellulose synthesis' 'niben101scf05392_103002-111060' '(at5g03760 : 912.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|31408 : 123.0) no description available & (reliability: 1824.0) & (original description: Putative CSLA9, Description = Glucomannan 4-beta-mannosyltransferase 9, PFAM = PF13641)' T '10.2' 'cell wall.cellulose synthesis' 'niben101scf05697_731701-740817' '(at5g03760 : 773.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|31408 : 122.0) no description available & (reliability: 1546.0) & (original description: Putative cslA1, Description = Cellulose synthase-like protein A1, PFAM = PF13641)' T '10.2' 'cell wall.cellulose synthesis' 'niben101scf06125_185774-192004' '(at5g03760 : 842.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|31408 : 126.0) no description available & (reliability: 1684.0) & (original description: Putative CSLA3, Description = Probable mannan synthase 3, PFAM = PF13641)' T '10.2' 'cell wall.cellulose synthesis' 'niben101scf06280_185134-190039' '(at5g22130 : 501.0) member of Glycosyltransferase Family- 50; PEANUT 1 (PNT1); FUNCTIONS IN: mannosyltransferase activity, transferase activity, transferring glycosyl groups, alpha-1,4-mannosyltransferase activity; INVOLVED IN: GPI anchor biosynthetic process, cellulose biosynthetic process, plant-type cell wall biogenesis, embryo development, cell division; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: Mannosyltransferase, DXD (InterPro:IPR007704). & (q500w7|pigm_arath : 501.0) GPI mannosyltransferase 1 (EC 2.4.1.-) (GPI mannosyltransferase I) (GPI-MT-I) (Phosphatidylinositol-glycan biosynthesis class M protein) (PIG-M) (Protein PEANUT1) - Arabidopsis thaliana (Mouse-ear cress) & (gnl|cdd|39096 : 329.0) no description available & (gnl|cdd|86771 : 222.0) no description available & (reliability: 1002.0) & (original description: Putative PIGM, Description = GPI mannosyltransferase 1, PFAM = PF05007)' T '10.2' 'cell wall.cellulose synthesis' 'niben101scf07070_169132-173785' '(at3g28180 : 944.0) encodes a gene similar to cellulose synthase; Cellulose-synthase-like C4 (CSLC04); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Cellulose-synthase-like C5 (TAIR:AT4G31590.1); Has 5595 Blast hits to 5589 proteins in 1569 species: Archae - 192; Bacteria - 4449; Metazoa - 13; Fungi - 97; Plants - 511; Viruses - 16; Other Eukaryotes - 317 (source: NCBI BLink). & (gnl|cdd|31408 : 149.0) no description available & (reliability: 1888.0) & (original description: Putative CSLC4, Description = Xyloglucan glycosyltransferase 4, PFAM = PF13632)' T '10.2' 'cell wall.cellulose synthesis' 'niben101scf10224_192929-198895' '(at5g22740 : 831.0) encodes a beta-mannan synthase based on in vitro enzyme assays from heterologously expressed protein; cellulose synthase-like A02 (CSLA02); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT5G03760.1); Has 5133 Blast hits to 5129 proteins in 1484 species: Archae - 200; Bacteria - 4017; Metazoa - 35; Fungi - 91; Plants - 482; Viruses - 11; Other Eukaryotes - 297 (source: NCBI BLink). & (gnl|cdd|31408 : 127.0) no description available & (reliability: 1662.0) & (original description: Putative CSLA2, Description = Glucomannan 4-beta-mannosyltransferase 2, PFAM = PF13632)' T '10.2' 'cell wall.cellulose synthesis' 'niben101scf11168_45096-50829' '(at5g03760 : 762.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|31408 : 123.0) no description available & (reliability: 1524.0) & (original description: Putative ManS, Description = Mannan synthase 1, PFAM = PF13641)' T '10.2' 'cell wall.cellulose synthesis' 'niben101scf14843_17346-21958' '(at4g07960 : 1070.0) encodes a gene similar to cellulose synthase; Cellulose-synthase-like C12 (CSLC12); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Cellulose-synthase-like C5 (TAIR:AT4G31590.1); Has 5318 Blast hits to 5313 proteins in 1549 species: Archae - 201; Bacteria - 4094; Metazoa - 52; Fungi - 109; Plants - 510; Viruses - 19; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|31408 : 143.0) no description available & (reliability: 2140.0) & (original description: Putative CSLC12, Description = Probable xyloglucan glycosyltransferase 12, PFAM = PF13641)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.3scaffold8886_14231-20695' '(at3g03050 : 1961.0) encodes a cellulose synthase like protein. mutations initiate root hairs that rupture at their tip soon after initiation. is required for the synthesis of a noncellulosic wall polysaccharide.; cellulose synthase-like D3 (CSLD3); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cyclopentenone, plant-type cell wall biogenesis, response to cold, polysaccharide biosynthetic process; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose-synthase like D2 (TAIR:AT5G16910.1); Has 3102 Blast hits to 2806 proteins in 639 species: Archae - 29; Bacteria - 1146; Metazoa - 1; Fungi - 6; Plants - 1829; Viruses - 5; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|67186 : 1372.0) no description available & (reliability: 3922.0) & (original description: Putative CSLD3, Description = Cellulose synthase-like protein D3, PFAM = PF14570;PF03552)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.3scaffold11253_2745-9145' '(at1g02730 : 1646.0) Encodes a gene similar to cellulose synthase. Knock-out mutant has reduced growth, reduced xylan level and reduced xylan synthase activity in stems.; cellulose synthase-like D5 (CSLD5); CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like D3 (TAIR:AT3G03050.1); Has 3375 Blast hits to 3003 proteins in 709 species: Archae - 13; Bacteria - 1269; Metazoa - 102; Fungi - 19; Plants - 1879; Viruses - 2; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|67186 : 1304.0) no description available & (reliability: 3292.0) & (original description: Putative CSLD5, Description = Cellulose synthase-like protein D5, PFAM = PF03552)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.3scaffold17644_20911-30434' '(at4g23990 : 235.0) encodes a protein similar to cellulose synthase; cellulose synthase like G3 (CSLG3); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G1 (TAIR:AT4G24010.1); Has 2576 Blast hits to 2006 proteins in 301 species: Archae - 0; Bacteria - 469; Metazoa - 0; Fungi - 15; Plants - 2040; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|67186 : 229.0) no description available & (reliability: 470.0) & (original description: Putative CSLH, Description = Cellulose synthase-like protein D3, PFAM = PF03552)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.3scaffold18045_24841-33340' '(at5g64740 : 1729.0) Encodes a cellulose synthase isomer. CESA6 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA6, along with CESA1 and CESA3 are present in the same plasma membrane complex for cellulose biosynthesis. CESA2 and CESA5 are related to CESA6, having partially redundant roles. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.; cellulose synthase 6 (CESA6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: in 6 processes; LOCATED IN: cortical microtubule, transverse to long axis, Golgi apparatus, cellulose synthase complex, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 5 (TAIR:AT5G09870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67186 : 1496.0) no description available & (reliability: 3458.0) & (original description: Putative CESA6, Description = Cellulose synthase A catalytic subunit 6 [UDP-forming], PFAM = PF03552;PF14569)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.3scaffold22699_11391-21406' '(at4g32410 : 1922.0) Encodes a cellulose synthase isomer. CESA1 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA1, along with CESA3 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. lasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.; cellulose synthase 1 (CESA1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: primary cell wall biogenesis, cellulose biosynthetic process, plant-type cell wall biogenesis, hyperosmotic salinity response; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 10 (TAIR:AT2G25540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67186 : 1551.0) no description available & (reliability: 3844.0) & (original description: Putative CESA1, Description = Cellulose synthase A catalytic subunit 1 [UDP-forming], PFAM = PF03552;PF14569)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.3scaffold26906_6741-14999' '(at5g64740 : 1721.0) Encodes a cellulose synthase isomer. CESA6 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA6, along with CESA1 and CESA3 are present in the same plasma membrane complex for cellulose biosynthesis. CESA2 and CESA5 are related to CESA6, having partially redundant roles. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.; cellulose synthase 6 (CESA6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: in 6 processes; LOCATED IN: cortical microtubule, transverse to long axis, Golgi apparatus, cellulose synthase complex, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 5 (TAIR:AT5G09870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67186 : 1494.0) no description available & (reliability: 3442.0) & (original description: Putative CESA3, Description = Probable cellulose synthase A catalytic subunit 3 [UDP-forming], PFAM = PF14569;PF03552)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.3scaffold50950_6606-14316' '(at5g64740 : 1701.0) Encodes a cellulose synthase isomer. CESA6 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA6, along with CESA1 and CESA3 are present in the same plasma membrane complex for cellulose biosynthesis. CESA2 and CESA5 are related to CESA6, having partially redundant roles. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.; cellulose synthase 6 (CESA6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: in 6 processes; LOCATED IN: cortical microtubule, transverse to long axis, Golgi apparatus, cellulose synthase complex, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 5 (TAIR:AT5G09870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67186 : 1458.0) no description available & (reliability: 3402.0) & (original description: Putative cesA4, Description = Cellulose synthase, PFAM = PF03552;PF03552;PF14569)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.5scaffold159_648758-658353' '(at5g64740 : 1756.0) Encodes a cellulose synthase isomer. CESA6 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA6, along with CESA1 and CESA3 are present in the same plasma membrane complex for cellulose biosynthesis. CESA2 and CESA5 are related to CESA6, having partially redundant roles. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.; cellulose synthase 6 (CESA6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: in 6 processes; LOCATED IN: cortical microtubule, transverse to long axis, Golgi apparatus, cellulose synthase complex, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 5 (TAIR:AT5G09870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67186 : 1516.0) no description available & (reliability: 3512.0) & (original description: Putative CESA6, Description = Cellulose synthase A catalytic subunit 6 [UDP-forming], PFAM = PF14569;PF03552)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.5scaffold540_261593-269293' '(at1g55850 : 699.0) encodes a protein similar to cellulose synthase; cellulose synthase like E1 (CSLE1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G2 (TAIR:AT4G24000.1); Has 2588 Blast hits to 1976 proteins in 305 species: Archae - 7; Bacteria - 382; Metazoa - 5; Fungi - 13; Plants - 2129; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|67186 : 313.0) no description available & (reliability: 1398.0) & (original description: Putative CSLE6, Description = Cellulose synthase-like protein E6, PFAM = PF03552;PF03552)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.5scaffold2279_226008-236159' '(at4g24000 : 504.0) encodes a protein similar to cellulose synthase; cellulose synthase like G2 (CSLG2); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G1 (TAIR:AT4G24010.1); Has 2950 Blast hits to 2333 proteins in 442 species: Archae - 3; Bacteria - 792; Metazoa - 2; Fungi - 20; Plants - 2101; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|67186 : 292.0) no description available & (reliability: 1008.0) & (original description: Putative Sb03g047220, Description = Putative uncharacterized protein Sb03g047220, PFAM = PF03552;PF03552)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.5scaffold2391_326414-340312' '(at1g55850 : 791.0) encodes a protein similar to cellulose synthase; cellulose synthase like E1 (CSLE1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G2 (TAIR:AT4G24000.1); Has 2588 Blast hits to 1976 proteins in 305 species: Archae - 7; Bacteria - 382; Metazoa - 5; Fungi - 13; Plants - 2129; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|67186 : 304.0) no description available & (gnl|cdd|36905 : 203.0) no description available & (reliability: 1582.0) & (original description: Putative CSLE1, Description = Cellulose synthase-like protein E1, PFAM = PF01105;PF03552;PF03552)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.5scaffold2412_236489-294361' '(at4g24010 : 378.0) encodes a protein similar to cellulose synthase; cellulose synthase like G1 (CSLG1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: hypocotyl, sepal, male gametophyte, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G3 (TAIR:AT4G23990.1); Has 3059 Blast hits to 2371 proteins in 475 species: Archae - 2; Bacteria - 903; Metazoa - 2; Fungi - 10; Plants - 2111; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|67186 : 343.0) no description available & (reliability: 756.0) & (original description: Putative glysoja_033236, Description = Cellulose synthase-like protein G1, PFAM = PF03552;PF03552)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.5scaffold2482_249790-261581' '(at5g05170 : 1858.0) Encodes a cellulose synthase isomer. CESA3 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA3, along with CESA1 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.; CONSTITUTIVE EXPRESSION OF VSP 1 (CEV1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: primary cell wall biogenesis, cellulose biosynthetic process, defense response; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 1 (TAIR:AT4G32410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67186 : 1562.0) no description available & (reliability: 3716.0) & (original description: Putative CESA3, Description = Cellulose synthase A catalytic subunit 3 [UDP-forming], PFAM = PF14569;PF03552)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.5scaffold4753_29429-46049' '(at1g55850 : 662.0) encodes a protein similar to cellulose synthase; cellulose synthase like E1 (CSLE1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G2 (TAIR:AT4G24000.1); Has 2588 Blast hits to 1976 proteins in 305 species: Archae - 7; Bacteria - 382; Metazoa - 5; Fungi - 13; Plants - 2129; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|67186 : 329.0) no description available & (reliability: 1324.0) & (original description: Putative CSLE1, Description = Cellulose synthase-like protein E6, PFAM = PF03552;PF03552)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.5scaffold5414_12931-21329' '(at5g44030 : 1621.0) Encodes a cellulose synthase involved in secondary cell wall biosynthesis. Confers resistance towards bacterial and fungal pathogens, independent of salicylic acid, ethylene and jasmonate signaling.; cellulose synthase A4 (CESA4); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: cellulose biosynthetic process, plant-type cell wall biogenesis, defense response to bacterium, defense response to fungus, secondary cell wall biogenesis; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: Cellulose synthase family protein (TAIR:AT5G05170.1); Has 3263 Blast hits to 2832 proteins in 640 species: Archae - 9; Bacteria - 1071; Metazoa - 1; Fungi - 31; Plants - 2051; Viruses - 7; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|67186 : 1558.0) no description available & (reliability: 3242.0) & (original description: Putative CESA4, Description = Cellulose synthase A catalytic subunit 4 [UDP-forming], PFAM = PF14569;PF03552)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'nbv0.5scaffold9700_3751-14866' '(at2g32540 : 699.0) encodes a gene similar to cellulose synthase; cellulose synthase-like B4 (CSLB04); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like B3 (TAIR:AT2G32530.1); Has 2375 Blast hits to 2288 proteins in 474 species: Archae - 7; Bacteria - 756; Metazoa - 0; Fungi - 5; Plants - 1590; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|67186 : 506.0) no description available & (reliability: 1398.0) & (original description: Putative CSLH1, Description = Cellulose synthase-like protein H1, PFAM = PF03552;PF03552)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben044scf00005464ctg008_1-7362' '(at5g05170 : 1493.0) Encodes a cellulose synthase isomer. CESA3 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA3, along with CESA1 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.; CONSTITUTIVE EXPRESSION OF VSP 1 (CEV1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: primary cell wall biogenesis, cellulose biosynthetic process, defense response; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 1 (TAIR:AT4G32410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67186 : 1213.0) no description available & (reliability: 2986.0) & (original description: Putative CES, Description = Cellulose synthase A, PFAM = PF03552;PF14569)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben044scf00007839ctg015_1656-8023' '(at3g03050 : 1977.0) encodes a cellulose synthase like protein. mutations initiate root hairs that rupture at their tip soon after initiation. is required for the synthesis of a noncellulosic wall polysaccharide.; cellulose synthase-like D3 (CSLD3); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cyclopentenone, plant-type cell wall biogenesis, response to cold, polysaccharide biosynthetic process; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose-synthase like D2 (TAIR:AT5G16910.1); Has 3102 Blast hits to 2806 proteins in 639 species: Archae - 29; Bacteria - 1146; Metazoa - 1; Fungi - 6; Plants - 1829; Viruses - 5; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|67186 : 1360.0) no description available & (reliability: 3954.0) & (original description: Putative cslD1, Description = Cellulose synthase, PFAM = PF03552;PF14570)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben044scf00017162ctg003_1476-6056' '(at1g55850 : 115.0) encodes a protein similar to cellulose synthase; cellulose synthase like E1 (CSLE1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G2 (TAIR:AT4G24000.1); Has 2588 Blast hits to 1976 proteins in 305 species: Archae - 7; Bacteria - 382; Metazoa - 5; Fungi - 13; Plants - 2129; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|67186 : 98.1) no description available & (reliability: 230.0) & (original description: Putative CSLB1, Description = Cellulose synthase-like protein H1, PFAM = PF03552)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben044scf00017685ctg008_5306-9641' '(at5g03760 : 511.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 962.0) & (original description: Putative cslA1, Description = Cellulose synthase-like protein A1, PFAM = PF13632)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben044scf00019760ctg008_20447-26889' '(at3g03050 : 1991.0) encodes a cellulose synthase like protein. mutations initiate root hairs that rupture at their tip soon after initiation. is required for the synthesis of a noncellulosic wall polysaccharide.; cellulose synthase-like D3 (CSLD3); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cyclopentenone, plant-type cell wall biogenesis, response to cold, polysaccharide biosynthetic process; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose-synthase like D2 (TAIR:AT5G16910.1); Has 3102 Blast hits to 2806 proteins in 639 species: Archae - 29; Bacteria - 1146; Metazoa - 1; Fungi - 6; Plants - 1829; Viruses - 5; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|67186 : 1372.0) no description available & (reliability: 3982.0) & (original description: Putative CSLD3, Description = Cellulose synthase-like protein D3, PFAM = PF03552;PF14570)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf00581_20479-26893' '(at4g18780 : 1593.0) Encodes a member of the cellulose synthase family involved in secondary cell wall biosynthesis. Mutants have abnormal xylem formation, reduced cellulose content, and enhanced drought and osmotic stress tolerance. Mediates resistance towards bacterial pathogens via ABA. Confers resistance towards bacterial and fungal pathogens, independent of salicylic acid, ethylene and jasmonate signaling.; IRREGULAR XYLEM 1 (IRX1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: in 7 processes; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase A4 (TAIR:AT5G44030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67186 : 1544.0) no description available & (reliability: 3186.0) & (original description: Putative CESA8, Description = Cellulose synthase A catalytic subunit 8 [UDP-forming], PFAM = PF03552;PF14569)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf01071_302574-311000' '(at5g64740 : 1734.0) Encodes a cellulose synthase isomer. CESA6 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA6, along with CESA1 and CESA3 are present in the same plasma membrane complex for cellulose biosynthesis. CESA2 and CESA5 are related to CESA6, having partially redundant roles. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.; cellulose synthase 6 (CESA6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: in 6 processes; LOCATED IN: cortical microtubule, transverse to long axis, Golgi apparatus, cellulose synthase complex, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 5 (TAIR:AT5G09870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67186 : 1496.0) no description available & (reliability: 3468.0) & (original description: Putative CESA6, Description = Cellulose synthase A catalytic subunit 6 [UDP-forming], PFAM = PF03552;PF14569)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf01146_918255-926213' '(at2g33100 : 1582.0) encodes a gene similar to cellulose synthase; cellulose synthase-like D1 (CSLD1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: pollen germination, plant-type cell wall biogenesis, polysaccharide biosynthetic process; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like D3 (TAIR:AT3G03050.1); Has 3587 Blast hits to 2817 proteins in 647 species: Archae - 12; Bacteria - 1535; Metazoa - 3; Fungi - 28; Plants - 1916; Viruses - 7; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|67186 : 1260.0) no description available & (reliability: 3164.0) & (original description: Putative CSLD1, Description = Cellulose synthase-like protein D1, PFAM = PF03552)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf01382_292829-300544' '(at5g17420 : 1758.0) Encodes a xylem-specific cellulose synthase that is phosphorylated on one or more serine residues (on either S185 or one of S180 or S181).; IRREGULAR XYLEM 3 (IRX3); FUNCTIONS IN: cellulose synthase activity; INVOLVED IN: cellulose biosynthetic process, plant-type cell wall biogenesis, secondary cell wall biogenesis, rhamnogalacturonan I side chain metabolic process; LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Cellulose synthase family protein (TAIR:AT5G05170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67186 : 1518.0) no description available & (reliability: 3516.0) & (original description: Putative CESA7, Description = Cellulose synthase A catalytic subunit 7 [UDP-forming], PFAM = PF03552;PF14569)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf01481_14812-22147' '(at5g03760 : 353.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 684.0) & (original description: Putative cslA1, Description = Cellulose synthase-like protein A1, PFAM = PF00535)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf01623_675301-681701' '(at1g02730 : 1643.0) Encodes a gene similar to cellulose synthase. Knock-out mutant has reduced growth, reduced xylan level and reduced xylan synthase activity in stems.; cellulose synthase-like D5 (CSLD5); CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like D3 (TAIR:AT3G03050.1); Has 3375 Blast hits to 3003 proteins in 709 species: Archae - 13; Bacteria - 1269; Metazoa - 102; Fungi - 19; Plants - 1879; Viruses - 2; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|67186 : 1304.0) no description available & (reliability: 3286.0) & (original description: Putative CSLD5, Description = Cellulose synthase-like protein D5, PFAM = PF03552)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf01849_377823-384896' '(at1g55850 : 793.0) encodes a protein similar to cellulose synthase; cellulose synthase like E1 (CSLE1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G2 (TAIR:AT4G24000.1); Has 2588 Blast hits to 1976 proteins in 305 species: Archae - 7; Bacteria - 382; Metazoa - 5; Fungi - 13; Plants - 2129; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|67186 : 304.0) no description available & (reliability: 1586.0) & (original description: Putative CSLE1, Description = Cellulose synthase-like protein E1, PFAM = PF03552;PF03552)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf02476_293039-301463' '(at4g24010 : 393.0) encodes a protein similar to cellulose synthase; cellulose synthase like G1 (CSLG1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: hypocotyl, sepal, male gametophyte, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G3 (TAIR:AT4G23990.1); Has 3059 Blast hits to 2371 proteins in 475 species: Archae - 2; Bacteria - 903; Metazoa - 2; Fungi - 10; Plants - 2111; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|67186 : 347.0) no description available & (reliability: 786.0) & (original description: Putative PGSC0003DMG400011752, Description = Cellulose synthase-like protein D3, PFAM = PF03552;PF03552)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf03059_6429-18742' '(at4g24010 : 480.0) encodes a protein similar to cellulose synthase; cellulose synthase like G1 (CSLG1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: hypocotyl, sepal, male gametophyte, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G3 (TAIR:AT4G23990.1); Has 3059 Blast hits to 2371 proteins in 475 species: Archae - 2; Bacteria - 903; Metazoa - 2; Fungi - 10; Plants - 2111; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|67186 : 442.0) no description available & (reliability: 960.0) & (original description: Putative glysoja_033236, Description = Cellulose synthase-like protein G1, PFAM = PF03552;PF03552)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf03222_177298-188133' '(at4g32410 : 1919.0) Encodes a cellulose synthase isomer. CESA1 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA1, along with CESA3 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. lasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.; cellulose synthase 1 (CESA1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: primary cell wall biogenesis, cellulose biosynthetic process, plant-type cell wall biogenesis, hyperosmotic salinity response; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 10 (TAIR:AT2G25540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67186 : 1546.0) no description available & (reliability: 3838.0) & (original description: Putative CESA1, Description = Cellulose synthase A catalytic subunit 1 [UDP-forming], PFAM = PF14569;PF03552)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf03326_103576-110384' '(at3g03050 : 2001.0) encodes a cellulose synthase like protein. mutations initiate root hairs that rupture at their tip soon after initiation. is required for the synthesis of a noncellulosic wall polysaccharide.; cellulose synthase-like D3 (CSLD3); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cyclopentenone, plant-type cell wall biogenesis, response to cold, polysaccharide biosynthetic process; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose-synthase like D2 (TAIR:AT5G16910.1); Has 3102 Blast hits to 2806 proteins in 639 species: Archae - 29; Bacteria - 1146; Metazoa - 1; Fungi - 6; Plants - 1829; Viruses - 5; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|67186 : 1368.0) no description available & (reliability: 4002.0) & (original description: Putative CSLD3, Description = Cellulose synthase-like protein D3, PFAM = PF03552;PF14570)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf03365_523777-532406' '(at5g44030 : 1617.0) Encodes a cellulose synthase involved in secondary cell wall biosynthesis. Confers resistance towards bacterial and fungal pathogens, independent of salicylic acid, ethylene and jasmonate signaling.; cellulose synthase A4 (CESA4); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: cellulose biosynthetic process, plant-type cell wall biogenesis, defense response to bacterium, defense response to fungus, secondary cell wall biogenesis; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: Cellulose synthase family protein (TAIR:AT5G05170.1); Has 3263 Blast hits to 2832 proteins in 640 species: Archae - 9; Bacteria - 1071; Metazoa - 1; Fungi - 31; Plants - 2051; Viruses - 7; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|67186 : 1559.0) no description available & (reliability: 3234.0) & (original description: Putative CESA4, Description = Cellulose synthase A catalytic subunit 4 [UDP-forming], PFAM = PF14569;PF03552)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf04405_5586-17980' '(at2g32540 : 442.0) encodes a gene similar to cellulose synthase; cellulose synthase-like B4 (CSLB04); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like B3 (TAIR:AT2G32530.1); Has 2375 Blast hits to 2288 proteins in 474 species: Archae - 7; Bacteria - 756; Metazoa - 0; Fungi - 5; Plants - 1590; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|67186 : 342.0) no description available & (reliability: 884.0) & (original description: Putative At2g32530, Description = Putative cellulose synthase, PFAM = PF03552)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf04634_20216-29274' '(at2g21770 : 1645.0) cellulose synthase, related to CESA6.; cellulose synthase A9 (CESA9); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: seed coat development, plant-type cell wall biogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase A2 (TAIR:AT4G39350.1); Has 3186 Blast hits to 2819 proteins in 625 species: Archae - 9; Bacteria - 1125; Metazoa - 1; Fungi - 19; Plants - 1939; Viruses - 5; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|67186 : 1489.0) no description available & (reliability: 3290.0) & (original description: Putative Z632, Description = Cellulose synthase, PFAM = PF03552;PF14569)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf05697_731701-740817' '(at5g03760 : 773.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|31408 : 122.0) no description available & (reliability: 1456.0) & (original description: Putative cslA1, Description = Cellulose synthase-like protein A1, PFAM = PF13641)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf06125_185774-192004' '(at5g03760 : 842.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|31408 : 126.0) no description available & (reliability: 1590.0) & (original description: Putative CSLA3, Description = Probable mannan synthase 3, PFAM = PF13641)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf06375_329667-336308' '(gnl|cdd|67186 : 1472.0) no description available & (at5g64740 : 1461.0) Encodes a cellulose synthase isomer. CESA6 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA6, along with CESA1 and CESA3 are present in the same plasma membrane complex for cellulose biosynthesis. CESA2 and CESA5 are related to CESA6, having partially redundant roles. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.; cellulose synthase 6 (CESA6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: in 6 processes; LOCATED IN: cortical microtubule, transverse to long axis, Golgi apparatus, cellulose synthase complex, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 5 (TAIR:AT5G09870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 2922.0) & (original description: Putative CESA3, Description = Probable cellulose synthase A catalytic subunit 3 [UDP-forming], PFAM = PF14569;PF03552)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf06423_208681-227006' '(at1g55850 : 665.0) encodes a protein similar to cellulose synthase; cellulose synthase like E1 (CSLE1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G2 (TAIR:AT4G24000.1); Has 2588 Blast hits to 1976 proteins in 305 species: Archae - 7; Bacteria - 382; Metazoa - 5; Fungi - 13; Plants - 2129; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|67186 : 334.0) no description available & (reliability: 1330.0) & (original description: Putative CSLE6, Description = Cellulose synthase-like protein E6, PFAM = PF03552;PF03552)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf06504_2587-10860' '(at4g23990 : 817.0) encodes a protein similar to cellulose synthase; cellulose synthase like G3 (CSLG3); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G1 (TAIR:AT4G24010.1); Has 2576 Blast hits to 2006 proteins in 301 species: Archae - 0; Bacteria - 469; Metazoa - 0; Fungi - 15; Plants - 2040; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|67186 : 414.0) no description available & (reliability: 1634.0) & (original description: Putative CSLG3, Description = Cellulose synthase-like protein G3, PFAM = PF03552;PF03552)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf06966_84997-92886' '(at5g64740 : 1762.0) Encodes a cellulose synthase isomer. CESA6 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA6, along with CESA1 and CESA3 are present in the same plasma membrane complex for cellulose biosynthesis. CESA2 and CESA5 are related to CESA6, having partially redundant roles. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.; cellulose synthase 6 (CESA6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: in 6 processes; LOCATED IN: cortical microtubule, transverse to long axis, Golgi apparatus, cellulose synthase complex, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 5 (TAIR:AT5G09870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67186 : 1512.0) no description available & (reliability: 3524.0) & (original description: Putative CESA6, Description = Cellulose synthase A catalytic subunit 6 [UDP-forming], PFAM = PF03552;PF14569)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf07824_6453-16329' '(at4g32410 : 1924.0) Encodes a cellulose synthase isomer. CESA1 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA1, along with CESA3 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. lasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.; cellulose synthase 1 (CESA1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: primary cell wall biogenesis, cellulose biosynthetic process, plant-type cell wall biogenesis, hyperosmotic salinity response; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 10 (TAIR:AT2G25540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67186 : 1552.0) no description available & (reliability: 3848.0) & (original description: Putative CESA1, Description = Cellulose synthase A catalytic subunit 1 [UDP-forming], PFAM = PF14569;PF03552)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf09867_279470-287816' '(at4g38190 : 1845.0) encodes a gene similar to cellulose synthase; cellulose synthase like D4 (CSLD4); CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like D3 (TAIR:AT3G03050.1); Has 3503 Blast hits to 2866 proteins in 674 species: Archae - 22; Bacteria - 1611; Metazoa - 5; Fungi - 10; Plants - 1761; Viruses - 2; Other Eukaryotes - 92 (source: NCBI BLink). & (gnl|cdd|67186 : 1303.0) no description available & (reliability: 3690.0) & (original description: Putative CSLD4, Description = Cellulose synthase-like protein D4, PFAM = PF03552;PF03552;PF14570)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf14115_225303-231785' '(at3g03050 : 1955.0) encodes a cellulose synthase like protein. mutations initiate root hairs that rupture at their tip soon after initiation. is required for the synthesis of a noncellulosic wall polysaccharide.; cellulose synthase-like D3 (CSLD3); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cyclopentenone, plant-type cell wall biogenesis, response to cold, polysaccharide biosynthetic process; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose-synthase like D2 (TAIR:AT5G16910.1); Has 3102 Blast hits to 2806 proteins in 639 species: Archae - 29; Bacteria - 1146; Metazoa - 1; Fungi - 6; Plants - 1829; Viruses - 5; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|67186 : 1369.0) no description available & (reliability: 3910.0) & (original description: Putative CSLD3, Description = Cellulose synthase-like protein D3, PFAM = PF03552;PF14570)' T '10.2.1' 'cell wall.cellulose synthesis.cellulose synthase' 'niben101scf14566_107589-115490' '(at5g17420 : 1741.0) Encodes a xylem-specific cellulose synthase that is phosphorylated on one or more serine residues (on either S185 or one of S180 or S181).; IRREGULAR XYLEM 3 (IRX3); FUNCTIONS IN: cellulose synthase activity; INVOLVED IN: cellulose biosynthetic process, plant-type cell wall biogenesis, secondary cell wall biogenesis, rhamnogalacturonan I side chain metabolic process; LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Cellulose synthase family protein (TAIR:AT5G05170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67186 : 1524.0) no description available & (reliability: 3482.0) & (original description: Putative CESA7, Description = Cellulose synthase A catalytic subunit 7 [UDP-forming], PFAM = PF14569;PF03552)' T '10.2.2' 'cell wall.cellulose synthesis.COBRA' 'nbv0.3scaffold9046_35606-41740' '(at5g15630 : 723.0) Encodes a member of the COBRA family, similar to phytochelatin synthetase. Involved in secondary cell wall biosynthesis. Mutants make smaller plants with reduced levels of cellulose and cell wall sugars.; IRREGULAR XYLEM 6 (IRX6); INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family (TAIR:AT5G60920.1); Has 379 Blast hits to 368 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 379; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q6vsv1|cobl5_orysa : 655.0) COBRA-like 5 protein precursor (Protein BRITTLE CULM1) - Oryza sativa (Rice) & (gnl|cdd|86733 : 201.0) no description available & (reliability: 1446.0) & (original description: Putative COBL4, Description = COBRA-like protein 4, PFAM = PF04833)' T '10.2.2' 'cell wall.cellulose synthesis.COBRA' 'nbv0.5scaffold1165_410185-415178' '(at5g60920 : 631.0) Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions.; COBRA (COB); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor (TAIR:AT3G02210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q60e70|cobl3_orysa : 617.0) COBRA-like 3 protein precursor (BRITTLE CULM1-like 4 protein) - Oryza sativa (Rice) & (gnl|cdd|86733 : 193.0) no description available & (reliability: 1262.0) & (original description: Putative bk2, Description = COBRA-like protein 2, PFAM = PF04833)' T '10.2.2' 'cell wall.cellulose synthesis.COBRA' 'nbv0.5scaffold3145_268522-271124' '(at5g60920 : 284.0) Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions.; COBRA (COB); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor (TAIR:AT3G02210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6z4g8|cobl1_orysa : 268.0) COBRA-like 1 protein precursor (BRITTLE CULM1-like 6 protein) - Oryza sativa (Rice) & (gnl|cdd|86733 : 177.0) no description available & (reliability: 568.0) & (original description: Putative bk2, Description = COBRA-like protein 2, PFAM = PF04833)' T '10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben044scf00000376ctg011_1757-5531' '(q6z4g8|cobl1_orysa : 385.0) COBRA-like 1 protein precursor (BRITTLE CULM1-like 6 protein) - Oryza sativa (Rice) & (at5g60920 : 374.0) Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions.; COBRA (COB); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor (TAIR:AT3G02210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86733 : 105.0) no description available & (reliability: 748.0) & (original description: Putative BC1L6, Description = COBRA-like protein 1, PFAM = PF04833)' T '10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben044scf00029554ctg008_281-4816' '(at5g60920 : 602.0) Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions.; COBRA (COB); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor (TAIR:AT3G02210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q60e70|cobl3_orysa : 583.0) COBRA-like 3 protein precursor (BRITTLE CULM1-like 4 protein) - Oryza sativa (Rice) & (gnl|cdd|86733 : 193.0) no description available & (reliability: 1204.0) & (original description: Putative bk2, Description = COBRA-like protein 2, PFAM = PF04833)' T '10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben044scf00034948ctg002_1-4448' '(at3g20580 : 813.0) COBRA-like protein 10 precursor (COBL10); CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918); BEST Arabidopsis thaliana protein match is: COBRA-like protein 11 precursor (TAIR:AT4G27110.1); Has 377 Blast hits to 368 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 377; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86733 : 271.0) no description available & (q6z4g7|cobl6_orysa : 129.0) COBRA-like 6 protein precursor (BRITTLE CULM1-like 7 protein) - Oryza sativa (Rice) & (reliability: 1626.0) & (original description: Putative COBL10, Description = COBRA-like protein 10, PFAM = PF04833)' T '10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben044scf00036180ctg001_27739-35405' '(at3g20580 : 743.0) COBRA-like protein 10 precursor (COBL10); CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918); BEST Arabidopsis thaliana protein match is: COBRA-like protein 11 precursor (TAIR:AT4G27110.1); Has 377 Blast hits to 368 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 377; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86733 : 254.0) no description available & (q7xr91|cobl7_orysa : 141.0) COBRA-like 7 protein precursor (BRITTLE CULM1-like 3 protein) - Oryza sativa (Rice) & (reliability: 1486.0) & (original description: Putative COBL7, Description = COBRA-like protein 7, PFAM = PF04833)' T '10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf00135_60022-79283' '(q6z4g8|cobl1_orysa : 427.0) COBRA-like 1 protein precursor (BRITTLE CULM1-like 6 protein) - Oryza sativa (Rice) & (at5g60920 : 412.0) Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions.; COBRA (COB); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor (TAIR:AT3G02210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86733 : 108.0) no description available & (reliability: 824.0) & (original description: Putative bk2, Description = COBRA-like protein 2, PFAM = PF04833)' T '10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf00135_60151-79394' '(q6z4g8|cobl1_orysa : 400.0) COBRA-like 1 protein precursor (BRITTLE CULM1-like 6 protein) - Oryza sativa (Rice) & (at3g02210 : 379.0) COBRA-like protein 1 precursor (COBL1); CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like protein 2 precursor (TAIR:AT3G29810.1); Has 380 Blast hits to 369 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 380; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86733 : 109.0) no description available & (reliability: 758.0) & (original description: Putative bk2, Description = COBRA-like protein 2, PFAM = PF04833)' T '10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf00176_1040149-1044183' '(at3g20580 : 748.0) COBRA-like protein 10 precursor (COBL10); CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918); BEST Arabidopsis thaliana protein match is: COBRA-like protein 11 precursor (TAIR:AT4G27110.1); Has 377 Blast hits to 368 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 377; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86733 : 255.0) no description available & (q6z4g7|cobl6_orysa : 141.0) COBRA-like 6 protein precursor (BRITTLE CULM1-like 7 protein) - Oryza sativa (Rice) & (reliability: 1496.0) & (original description: Putative COBL10, Description = COBRA-like protein 10, PFAM = PF04833)' T '10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf00391_505315-510104' '(at3g20580 : 800.0) COBRA-like protein 10 precursor (COBL10); CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918); BEST Arabidopsis thaliana protein match is: COBRA-like protein 11 precursor (TAIR:AT4G27110.1); Has 377 Blast hits to 368 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 377; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86733 : 260.0) no description available & (q6z4g7|cobl6_orysa : 130.0) COBRA-like 6 protein precursor (BRITTLE CULM1-like 7 protein) - Oryza sativa (Rice) & (reliability: 1600.0) & (original description: Putative COBL10, Description = COBRA-like protein 10, PFAM = PF04833)' T '10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf01970_699170-704294' '(at1g09790 : 506.0) COBRA-like protein 6 precursor (COBL6); CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor (TAIR:AT3G02210.1); Has 376 Blast hits to 369 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 376; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q6z4g8|cobl1_orysa : 483.0) COBRA-like 1 protein precursor (BRITTLE CULM1-like 6 protein) - Oryza sativa (Rice) & (gnl|cdd|86733 : 145.0) no description available & (reliability: 1012.0) & (original description: Putative COBL6, Description = COBRA-like protein 6, PFAM = PF04833)' T '10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf02289_558406-564812' '(at5g15630 : 723.0) Encodes a member of the COBRA family, similar to phytochelatin synthetase. Involved in secondary cell wall biosynthesis. Mutants make smaller plants with reduced levels of cellulose and cell wall sugars.; IRREGULAR XYLEM 6 (IRX6); INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family (TAIR:AT5G60920.1); Has 379 Blast hits to 368 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 379; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q6vsv1|cobl5_orysa : 655.0) COBRA-like 5 protein precursor (Protein BRITTLE CULM1) - Oryza sativa (Rice) & (gnl|cdd|86733 : 201.0) no description available & (reliability: 1446.0) & (original description: Putative COBL4, Description = COBRA-like protein 4, PFAM = PF04833)' T '10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf02945_91517-96817' '(at4g16120 : 815.0) putative membrane-anchored cell wall protein; COBRA-like protein-7 precursor (COBL7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, Golgi apparatus, anchored to membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918); BEST Arabidopsis thaliana protein match is: COBRA-like protein 8 precursor (TAIR:AT3G16860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86733 : 288.0) no description available & (q6z4g8|cobl1_orysa : 139.0) COBRA-like 1 protein precursor (BRITTLE CULM1-like 6 protein) - Oryza sativa (Rice) & (reliability: 1630.0) & (original description: Putative COBL7, Description = COBRA-like protein 7, PFAM = PF04833)' T '10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf04339_222446-227758' '(at3g20580 : 818.0) COBRA-like protein 10 precursor (COBL10); CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918); BEST Arabidopsis thaliana protein match is: COBRA-like protein 11 precursor (TAIR:AT4G27110.1); Has 377 Blast hits to 368 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 377; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86733 : 271.0) no description available & (q6z4g7|cobl6_orysa : 129.0) COBRA-like 6 protein precursor (BRITTLE CULM1-like 7 protein) - Oryza sativa (Rice) & (reliability: 1636.0) & (original description: Putative COBL10, Description = COBRA-like protein 10, PFAM = PF04833)' T '10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf05618_290977-296717' '(at5g60920 : 685.0) Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions.; COBRA (COB); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor (TAIR:AT3G02210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6z4g8|cobl1_orysa : 671.0) COBRA-like 1 protein precursor (BRITTLE CULM1-like 6 protein) - Oryza sativa (Rice) & (gnl|cdd|86733 : 208.0) no description available & (reliability: 1370.0) & (original description: Putative COB, Description = Protein COBRA, PFAM = PF04833)' T '10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf06076_18853-22420' '(at5g60920 : 290.0) Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions.; COBRA (COB); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor (TAIR:AT3G02210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6z4g8|cobl1_orysa : 272.0) COBRA-like 1 protein precursor (BRITTLE CULM1-like 6 protein) - Oryza sativa (Rice) & (gnl|cdd|86733 : 182.0) no description available & (reliability: 580.0) & (original description: Putative bk2, Description = COBRA-like protein 2, PFAM = PF04833)' T '10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf08721_219557-223427' '(at5g15630 : 524.0) Encodes a member of the COBRA family, similar to phytochelatin synthetase. Involved in secondary cell wall biosynthesis. Mutants make smaller plants with reduced levels of cellulose and cell wall sugars.; IRREGULAR XYLEM 6 (IRX6); INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family (TAIR:AT5G60920.1); Has 379 Blast hits to 368 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 379; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q6z4g8|cobl1_orysa : 504.0) COBRA-like 1 protein precursor (BRITTLE CULM1-like 6 protein) - Oryza sativa (Rice) & (gnl|cdd|86733 : 181.0) no description available & (reliability: 1048.0) & (original description: Putative bk2, Description = COBRA-like protein 2, PFAM = PF04833)' T '10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf08721_233169-237700' '(at5g15630 : 710.0) Encodes a member of the COBRA family, similar to phytochelatin synthetase. Involved in secondary cell wall biosynthesis. Mutants make smaller plants with reduced levels of cellulose and cell wall sugars.; IRREGULAR XYLEM 6 (IRX6); INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family (TAIR:AT5G60920.1); Has 379 Blast hits to 368 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 379; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q6vsv1|cobl5_orysa : 670.0) COBRA-like 5 protein precursor (Protein BRITTLE CULM1) - Oryza sativa (Rice) & (gnl|cdd|86733 : 192.0) no description available & (reliability: 1420.0) & (original description: Putative COBL4, Description = COBRA-like protein 4, PFAM = PF04833)' T '10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf08721_236969-242689' '(at5g60920 : 668.0) Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions.; COBRA (COB); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor (TAIR:AT3G02210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6z4g8|cobl1_orysa : 659.0) COBRA-like 1 protein precursor (BRITTLE CULM1-like 6 protein) - Oryza sativa (Rice) & (gnl|cdd|86733 : 194.0) no description available & (reliability: 1336.0) & (original description: Putative COBL1, Description = COBRA-like protein 1, PFAM = PF04833)' T '10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf10887_3078-7920' '(at5g60920 : 711.0) Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions.; COBRA (COB); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor (TAIR:AT3G02210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q60e70|cobl3_orysa : 689.0) COBRA-like 3 protein precursor (BRITTLE CULM1-like 4 protein) - Oryza sativa (Rice) & (gnl|cdd|86733 : 205.0) no description available & (reliability: 1422.0) & (original description: Putative COB, Description = Protein COBRA, PFAM = PF04833)' T '10.2.2' 'cell wall.cellulose synthesis.COBRA' 'niben101scf13572_45127-50120' '(at5g60920 : 620.0) Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions.; COBRA (COB); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor (TAIR:AT3G02210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q60e70|cobl3_orysa : 614.0) COBRA-like 3 protein precursor (BRITTLE CULM1-like 4 protein) - Oryza sativa (Rice) & (gnl|cdd|86733 : 193.0) no description available & (reliability: 1240.0) & (original description: Putative bk2, Description = COBRA-like protein 2, PFAM = PF04833)' T '10.2.1001' 'cell wall degradation' 'ribose' 'cell wall degradation; minor CHO metabolism; auxin metabolism' M '10.2.1002' 'cell wall degradation' 'ribonate' 'cell wall degradation; minor CHO metabolism; auxin metabolism' M '10.2.1003' 'cell wall degradation' 'fucose' 'cell wall degradation' M '10.2.1004' 'cell wall degradation' 'mannose' 'cell wall degradation; minor CHO metabolism' M '10.2.1005' 'cell wall degradation' 'galactose' 'cell wall degradation; minor CHO metabolism' M '10.2.1006' 'cell wall degradation' 'arabinose' 'cell wall degradation; minor CHO metabolism' M '10.2.1007' 'cell wall degradation' 'galacturonate' 'cell wall degradation' M '10.2.1008' 'cell wall degradation' 'glucosamine' 'cell wall degradation' M '10.2.1009' 'cell wall degradation' 'glucosaminate' 'cell wall degradation' M '10.2.1010' 'cell wall degradation' 'rhamnose' 'cell wall degradation; minor CHO metabolism' M '10.2.1011' 'cell wall degradation' 'melibiose' 'cell wall degradation; minor CHO metabolism' M '10.2.1012' 'cell wall degradation' 'levoglucosan' 'cell wall degradation, degradation of cellulose' M '10.2.1013' 'cell wall degradation' 'hydroxyproline' 'cell wall degradation' M '10.3' 'cell wall.hemicellulose synthesis' 'nbv0.3scaffold73_109378-114777' '(at5g03795 : 509.0) Exostosin family protein; LOCATED IN: membrane; EXPRESSED IN: embryo, sepal, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT3G07620.1); Has 1413 Blast hits to 1401 proteins in 109 species: Archae - 0; Bacteria - 9; Metazoa - 310; Fungi - 4; Plants - 989; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (gnl|cdd|36239 : 316.0) no description available & (gnl|cdd|66673 : 219.0) no description available & (reliability: 944.0) & (original description: Putative At3g07620, Description = Probable glycosyltransferase At3g07620, PFAM = PF03016)' T '10.3' 'cell wall.hemicellulose synthesis' 'nbv0.5scaffold2082_212341-217992' '(at5g03795 : 511.0) Exostosin family protein; LOCATED IN: membrane; EXPRESSED IN: embryo, sepal, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT3G07620.1); Has 1413 Blast hits to 1401 proteins in 109 species: Archae - 0; Bacteria - 9; Metazoa - 310; Fungi - 4; Plants - 989; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (gnl|cdd|36239 : 313.0) no description available & (gnl|cdd|66673 : 219.0) no description available & (reliability: 946.0) & (original description: Putative XGD1, Description = Exostosin family protein, PFAM = PF03016)' T '10.3' 'cell wall.hemicellulose synthesis' 'nbv0.5scaffold3896_214289-220199' '(at5g62620 : 853.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, sugar binding, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G74800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37498 : 308.0) no description available & (gnl|cdd|85659 : 89.2) no description available & (reliability: 1706.0) & (original description: Putative GALT6, Description = Hydroxyproline O-galactosyltransferase GALT6, PFAM = PF01762;PF00337)' T '10.3' 'cell wall.hemicellulose synthesis' 'nbv0.5scaffold5912_481-6826' '(at5g20260 : 137.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G11130.1); Has 1489 Blast hits to 1482 proteins in 115 species: Archae - 0; Bacteria - 12; Metazoa - 396; Fungi - 4; Plants - 968; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative At3g42180, Description = Putative glycosyltransferase, PFAM = )' T '10.3' 'cell wall.hemicellulose synthesis' 'nbv0.5scaffold6869_11815-64812' '(at5g16890 : 406.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G35100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36239 : 110.0) no description available & (reliability: 812.0) & (original description: Putative AT5G16890, Description = Putative glucuronoxylan glucuronosyltransferase F8H, PFAM = PF03016)' T '10.3' 'cell wall.hemicellulose synthesis' 'niben044scf00025657ctg000_14468-21251' '(at5g25310 : 497.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G03795.1); Has 1327 Blast hits to 1319 proteins in 106 species: Archae - 0; Bacteria - 6; Metazoa - 283; Fungi - 4; Plants - 949; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|36239 : 300.0) no description available & (gnl|cdd|66673 : 185.0) no description available & (reliability: 994.0) & (original description: Putative At5g25310, Description = Probable glycosyltransferase At5g25310, PFAM = PF03016)' T '10.3' 'cell wall.hemicellulose synthesis' 'niben101scf00024_250572-255626' '(at5g62620 : 926.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, sugar binding, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G74800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37498 : 307.0) no description available & (gnl|cdd|84703 : 89.2) no description available & (reliability: 1852.0) & (original description: Putative BnaAnng17780D, Description = BnaAnng17780D protein, PFAM = PF01762;PF00337)' T '10.3' 'cell wall.hemicellulose synthesis' 'niben101scf00063_1392567-1397028' '(at1g74680 : 538.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: exostosin family protein (TAIR:AT3G45400.1); Has 1193 Blast hits to 1185 proteins in 64 species: Archae - 0; Bacteria - 4; Metazoa - 45; Fungi - 4; Plants - 1081; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|66673 : 259.0) no description available & (gnl|cdd|36239 : 254.0) no description available & (reliability: 1004.0) & (original description: Putative BnaA07g22100D, Description = BnaA07g22100D protein, PFAM = PF03016)' T '10.3' 'cell wall.hemicellulose synthesis' 'niben101scf00488_474652-480045' '(at5g62620 : 889.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, sugar binding, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G74800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37498 : 316.0) no description available & (gnl|cdd|84703 : 90.7) no description available & (reliability: 1778.0) & (original description: Putative GALT6, Description = Hydroxyproline O-galactosyltransferase GALT6, PFAM = PF00337;PF01762)' T '10.3' 'cell wall.hemicellulose synthesis' 'niben101scf00519_39551-43340' '(q9m5q1|fut1_pea : 673.0) Galactoside 2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan alpha-(1,2)-fucosyltransferase) (PsFT1) - Pisum sativum (Garden pea) & (gnl|cdd|66898 : 633.0) no description available & (at2g03220 : 617.0) member of Glycosyltransferase Family- 37; fucosyltransferase 1 (FT1); FUNCTIONS IN: transferase activity, transferring glycosyl groups, fucosyltransferase activity; INVOLVED IN: plant-type cell wall biogenesis, xyloglucan biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan fucosyltransferase (InterPro:IPR004938); BEST Arabidopsis thaliana protein match is: fucosyltransferase 7 (TAIR:AT1G14070.1); Has 329 Blast hits to 320 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 326; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 1234.0) & (original description: Putative FT1, Description = Galactoside 2-alpha-L-fucosyltransferase, PFAM = PF03254)' T '10.3' 'cell wall.hemicellulose synthesis' 'niben101scf00543_211920-217880' '(at5g62620 : 877.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, sugar binding, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G74800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37498 : 313.0) no description available & (gnl|cdd|85659 : 91.9) no description available & (reliability: 1754.0) & (original description: Putative GALT5, Description = Hydroxyproline O-galactosyltransferase GALT5, PFAM = PF00337;PF01762)' T '10.3' 'cell wall.hemicellulose synthesis' 'niben101scf01063_449864-457223' '(at5g16890 : 671.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G35100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36239 : 239.0) no description available & (gnl|cdd|66673 : 196.0) no description available & (reliability: 1342.0) & (original description: Putative BnaA10g17600D, Description = BnaA10g17600D protein, PFAM = PF03016)' T '10.3' 'cell wall.hemicellulose synthesis' 'niben101scf01459_33033-38996' '(at3g45400 : 614.0) exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT3G03650.1); Has 1358 Blast hits to 1353 proteins in 108 species: Archae - 0; Bacteria - 4; Metazoa - 218; Fungi - 4; Plants - 1054; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (gnl|cdd|36239 : 243.0) no description available & (gnl|cdd|66673 : 233.0) no description available & (reliability: 1228.0) & (original description: Putative BnaC03g55320D, Description = BnaC03g55320D protein, PFAM = PF03016)' T '10.3' 'cell wall.hemicellulose synthesis' 'niben101scf01908_3129-7567' '(at1g74680 : 554.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: exostosin family protein (TAIR:AT3G45400.1); Has 1193 Blast hits to 1185 proteins in 64 species: Archae - 0; Bacteria - 4; Metazoa - 45; Fungi - 4; Plants - 1081; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|36239 : 266.0) no description available & (gnl|cdd|66673 : 247.0) no description available & (reliability: 1024.0) & (original description: Putative At1g74680, Description = At1g74680/F1M20_36, PFAM = PF03016)' T '10.3' 'cell wall.hemicellulose synthesis' 'niben101scf02571_120588-125712' '(at5g62620 : 875.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, sugar binding, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G74800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37498 : 307.0) no description available & (gnl|cdd|84703 : 102.0) no description available & (reliability: 1750.0) & (original description: Putative GALT6, Description = Hydroxyproline O-galactosyltransferase GALT6, PFAM = PF01762;PF00337)' T '10.3' 'cell wall.hemicellulose synthesis' 'niben101scf03227_424087-428749' '(at3g45400 : 635.0) exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT3G03650.1); Has 1358 Blast hits to 1353 proteins in 108 species: Archae - 0; Bacteria - 4; Metazoa - 218; Fungi - 4; Plants - 1054; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (gnl|cdd|66673 : 252.0) no description available & (gnl|cdd|36239 : 250.0) no description available & (reliability: 1270.0) & (original description: Putative BnaC03g55320D, Description = BnaC03g55320D protein, PFAM = PF03016)' T '10.3' 'cell wall.hemicellulose synthesis' 'niben101scf03326_119031-122653' '(at5g16890 : 236.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G35100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36239 : 107.0) no description available & (gnl|cdd|66673 : 100.0) no description available & (reliability: 472.0) & (original description: Putative ARAD1, Description = Arabinosyltransferase-like protein, PFAM = PF03016)' T '10.3' 'cell wall.hemicellulose synthesis' 'niben101scf07231_208436-213692' '(q9m5q1|fut1_pea : 739.0) Galactoside 2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan alpha-(1,2)-fucosyltransferase) (PsFT1) - Pisum sativum (Garden pea) & (at2g03220 : 674.0) member of Glycosyltransferase Family- 37; fucosyltransferase 1 (FT1); FUNCTIONS IN: transferase activity, transferring glycosyl groups, fucosyltransferase activity; INVOLVED IN: plant-type cell wall biogenesis, xyloglucan biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan fucosyltransferase (InterPro:IPR004938); BEST Arabidopsis thaliana protein match is: fucosyltransferase 7 (TAIR:AT1G14070.1); Has 329 Blast hits to 320 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 326; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|66898 : 660.0) no description available & (reliability: 1348.0) & (original description: Putative FT1, Description = Galactoside 2-alpha-L-fucosyltransferase, PFAM = PF03254)' T '10.3' 'cell wall.hemicellulose synthesis' 'niben101scf10492_62762-75570' '(at5g25310 : 459.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G03795.1); Has 1327 Blast hits to 1319 proteins in 106 species: Archae - 0; Bacteria - 6; Metazoa - 283; Fungi - 4; Plants - 949; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|36239 : 291.0) no description available & (gnl|cdd|66673 : 183.0) no description available & (reliability: 918.0) & (original description: Putative At5g25310, Description = Probable glycosyltransferase At5g25310, PFAM = PF03016)' T '10.3' 'cell wall.hemicellulose synthesis' 'niben101scf12673_132961-138842' '(at5g11130 : 450.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G20260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36239 : 283.0) no description available & (gnl|cdd|66673 : 180.0) no description available & (reliability: 874.0) & (original description: Putative XGD1, Description = Exostosin family protein, PFAM = PF03016)' T '10.3' 'cell wall.hemicellulose synthesis' 'niben101scf16197_264164-277455' '(at5g03795 : 483.0) Exostosin family protein; LOCATED IN: membrane; EXPRESSED IN: embryo, sepal, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT3G07620.1); Has 1413 Blast hits to 1401 proteins in 109 species: Archae - 0; Bacteria - 9; Metazoa - 310; Fungi - 4; Plants - 989; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (gnl|cdd|36239 : 297.0) no description available & (gnl|cdd|66673 : 214.0) no description available & (reliability: 890.0) & (original description: Putative At3g07620, Description = Probable glycosyltransferase At3g07620, PFAM = PF03016)' T '10.3.1' 'cell wall.hemicellulose synthesis.xyloglucan' '' '' '10.3.1.1' 'cell wall.hemicellulose synthesis.xyloglucan.XXXG galactose Transferase' 'niben101scf00063_595710-599503' '(at2g29040 : 546.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 4124 Blast hits to 3335 proteins in 318 species: Archae - 0; Bacteria - 277; Metazoa - 1010; Fungi - 350; Plants - 587; Viruses - 35; Other Eukaryotes - 1865 (source: NCBI BLink). & (q8h038|katam_orysa : 533.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 315.0) no description available & (gnl|cdd|66673 : 305.0) no description available & (reliability: 1066.0) & (original description: Putative GT17, Description = Probable xyloglucan galactosyltransferase GT17, PFAM = PF03016)' T '10.3.1.1' 'cell wall.hemicellulose synthesis.xyloglucan.XXXG galactose Transferase' 'niben101scf09071_86984-90771' '(at2g20370 : 825.0) Encodes a xyloglucan galactosyltransferase located in the membrane of Golgi stacks that is involved in the biosynthesis of fucose. It is also involved in endomembrane organization. It is suggested that it is a dual-function protein that is responsible for actin organization and the synthesis of cell wall materials.; MURUS 3 (MUR3); CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G29040.1); Has 481 Blast hits to 480 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 4; Plants - 455; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (q8h038|katam_orysa : 794.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 317.0) no description available & (gnl|cdd|66673 : 316.0) no description available & (reliability: 1650.0) & (original description: Putative MUR3, Description = Xyloglucan galactosyltransferase MUR3, PFAM = PF03016)' T '10.3.1.1' 'cell wall.hemicellulose synthesis.xyloglucan.XXXG galactose Transferase' 'niben101scf11469_16054-19847' '(at2g29040 : 548.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 4124 Blast hits to 3335 proteins in 318 species: Archae - 0; Bacteria - 277; Metazoa - 1010; Fungi - 350; Plants - 587; Viruses - 35; Other Eukaryotes - 1865 (source: NCBI BLink). & (q8h038|katam_orysa : 528.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 315.0) no description available & (gnl|cdd|66673 : 306.0) no description available & (reliability: 1064.0) & (original description: Putative Os03g0144800, Description = Xyloglucan galactosyltransferase KATAMARI1 homolog, PFAM = PF03016)' T '10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'nbv0.3scaffold18719_19395-24400' '(at4g33330 : 616.0) plant glycogenin-like starch initiation protein 3 (PGSIP3); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, sperm cell, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 1 (TAIR:AT3G18660.1); Has 1395 Blast hits to 1389 proteins in 311 species: Archae - 0; Bacteria - 157; Metazoa - 262; Fungi - 295; Plants - 509; Viruses - 75; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|37161 : 206.0) no description available & (gnl|cdd|85496 : 124.0) no description available & (reliability: 1232.0) & (original description: Putative GUX2, Description = UDP-glucuronate:xylan alpha-glucuronosyltransferase 2, PFAM = PF01501)' T '10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'nbv0.5scaffold1053_686029-692419' '(at1g77130 : 850.0) plant glycogenin-like starch initiation protein 2 (PGSIP2); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 1 (TAIR:AT3G18660.3); Has 1471 Blast hits to 1463 proteins in 343 species: Archae - 0; Bacteria - 240; Metazoa - 259; Fungi - 287; Plants - 508; Viruses - 75; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|37161 : 261.0) no description available & (gnl|cdd|85496 : 130.0) no description available & (reliability: 1700.0) & (original description: Putative GUX3, Description = Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3, PFAM = PF01501)' T '10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'nbv0.5scaffold4705_84343-90067' '(at2g37090 : 381.0) The IRX9 gene encodes a putative family 43 glycosyl transferase. It was coordinately expressed with the cellulose synthase subunits during secondary cell wall formation. Cell wall analysis revealed a decrease in the abundance of xylan in the irx9 mutant, indicating that IRX9 is required for xylan synthesis. Mutants have irregular xylem phenotype suggesting a role in secondary cell wall biosynthesis.; IRREGULAR XYLEM 9 (IRX9); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 43 (InterPro:IPR005027); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G27600.2); Has 591 Blast hits to 584 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 323; Fungi - 0; Plants - 254; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|48336 : 210.0) no description available & (gnl|cdd|36689 : 203.0) no description available & (reliability: 762.0) & (original description: Putative IRX9, Description = Probable beta-1,4-xylosyltransferase IRX9, PFAM = PF03360)' T '10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben044scf00012222ctg009_770-7045' '(at4g33330 : 740.0) plant glycogenin-like starch initiation protein 3 (PGSIP3); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, sperm cell, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 1 (TAIR:AT3G18660.1); Has 1395 Blast hits to 1389 proteins in 311 species: Archae - 0; Bacteria - 157; Metazoa - 262; Fungi - 295; Plants - 509; Viruses - 75; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|37161 : 234.0) no description available & (gnl|cdd|85496 : 132.0) no description available & (reliability: 1480.0) & (original description: Putative GUX2, Description = UDP-glucuronate:xylan alpha-glucuronosyltransferase 2, PFAM = PF01501)' T '10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben044scf00043338ctg000_1-4345' '(at3g18660 : 850.0) Plants expressing an RNAi construct specifically targeting PGSIP1 was shown to have a dramatically reduced amount of starch.; plant glycogenin-like starch initiation protein 1 (PGSIP1); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, starch metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 2 (TAIR:AT1G77130.1). & (gnl|cdd|37161 : 274.0) no description available & (gnl|cdd|85496 : 132.0) no description available & (reliability: 1700.0) & (original description: Putative GUX1, Description = UDP-glucuronate:xylan alpha-glucuronosyltransferase 1, PFAM = PF01501)' T '10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben044scf00046432ctg005_1-4662' '(at5g54690 : 788.0) Encodes a protein with putative galacturonosyltransferase activity. Mutants defective in this gene displayed a notable reduction in xylose (>50%) in the cell walls from stems and roots and a reduction in cellulose (~25%).; galacturonosyltransferase 12 (GAUT12); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 13 (TAIR:AT3G01040.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85496 : 184.0) no description available & (reliability: 1576.0) & (original description: Putative GAUT12, Description = Probable galacturonosyltransferase 12, PFAM = PF01501)' T '10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben044scf00057887ctg002_43-7066' '(at1g77130 : 843.0) plant glycogenin-like starch initiation protein 2 (PGSIP2); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 1 (TAIR:AT3G18660.3); Has 1471 Blast hits to 1463 proteins in 343 species: Archae - 0; Bacteria - 240; Metazoa - 259; Fungi - 287; Plants - 508; Viruses - 75; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|37161 : 255.0) no description available & (gnl|cdd|85496 : 131.0) no description available & (reliability: 1686.0) & (original description: Putative GUX3, Description = Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3, PFAM = PF01501)' T '10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf00090_1261329-1268329' '(at4g33330 : 660.0) plant glycogenin-like starch initiation protein 3 (PGSIP3); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, sperm cell, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 1 (TAIR:AT3G18660.1); Has 1395 Blast hits to 1389 proteins in 311 species: Archae - 0; Bacteria - 157; Metazoa - 262; Fungi - 295; Plants - 509; Viruses - 75; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|37161 : 224.0) no description available & (gnl|cdd|85496 : 124.0) no description available & (reliability: 1320.0) & (original description: Putative GUX2, Description = UDP-glucuronate:xylan alpha-glucuronosyltransferase 2, PFAM = PF01501)' T '10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf00972_39366-47849' '(at1g77130 : 881.0) plant glycogenin-like starch initiation protein 2 (PGSIP2); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 1 (TAIR:AT3G18660.3); Has 1471 Blast hits to 1463 proteins in 343 species: Archae - 0; Bacteria - 240; Metazoa - 259; Fungi - 287; Plants - 508; Viruses - 75; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|37161 : 260.0) no description available & (gnl|cdd|85496 : 130.0) no description available & (reliability: 1762.0) & (original description: Putative GUX3, Description = Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3, PFAM = PF01501)' T '10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf01032_239558-244563' '(at4g33330 : 643.0) plant glycogenin-like starch initiation protein 3 (PGSIP3); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, sperm cell, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 1 (TAIR:AT3G18660.1); Has 1395 Blast hits to 1389 proteins in 311 species: Archae - 0; Bacteria - 157; Metazoa - 262; Fungi - 295; Plants - 509; Viruses - 75; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|37161 : 214.0) no description available & (gnl|cdd|85496 : 125.0) no description available & (reliability: 1286.0) & (original description: Putative GUX2, Description = UDP-glucuronate:xylan alpha-glucuronosyltransferase 2, PFAM = PF01501)' T '10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf01191_160628-165590' '(at1g54940 : 478.0) plant glycogenin-like starch initiation protein 4 (PGSIP4); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 5 (TAIR:AT1G08990.1); Has 1335 Blast hits to 1329 proteins in 289 species: Archae - 0; Bacteria - 103; Metazoa - 257; Fungi - 309; Plants - 506; Viruses - 75; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|37161 : 207.0) no description available & (gnl|cdd|85496 : 118.0) no description available & (reliability: 880.0) & (original description: Putative GUX4, Description = Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4, PFAM = PF01501)' T '10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf02215_533394-537074' '(at3g50760 : 463.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 2 (GATL2); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G19300.1); Has 1885 Blast hits to 1878 proteins in 434 species: Archae - 2; Bacteria - 935; Metazoa - 151; Fungi - 0; Plants - 716; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|85496 : 183.0) no description available & (reliability: 910.0) & (original description: Putative GATL2, Description = Probable galacturonosyltransferase-like 2, PFAM = PF01501)' T '10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf03653_214666-222016' '(at5g67230 : 507.0) Encodes a member of the GT43 family glycosyltransferases involved in glucuronoxylan biosynthesis: AT2G37090 (IRX9) and AT1G27600 (IRX9-L or I9H, IRX9 homolog); AT4G36890 (IRX14) and AT5G67230 (IRX14-L or I14H, IRX14 homolog). They form two functionally non-redundant groups essential for the normal elongation of glucuronoxylan backbone. I9H functions redundantly with IRX9, I14H is redundant with IRX14. IRX9 or I9H do not complement IRX14, IRX14 or I14H do not complement IRX9.; IRREGULAR XYLEM 14-LIKE (IRX14-L); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 43 (InterPro:IPR005027); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G36890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36689 : 239.0) no description available & (gnl|cdd|48336 : 221.0) no description available & (reliability: 932.0) & (original description: Putative IRX14H, Description = Probable beta-1,4-xylosyltransferase IRX14H, PFAM = PF03360)' T '10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf04339_12347-17122' '(at5g54690 : 769.0) Encodes a protein with putative galacturonosyltransferase activity. Mutants defective in this gene displayed a notable reduction in xylose (>50%) in the cell walls from stems and roots and a reduction in cellulose (~25%).; galacturonosyltransferase 12 (GAUT12); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 13 (TAIR:AT3G01040.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85496 : 182.0) no description available & (reliability: 1538.0) & (original description: Putative GAUT12, Description = Probable galacturonosyltransferase 12, PFAM = PF01501)' T '10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf04557_455932-459638' '(at2g28110 : 556.0) Homolog to AT5G22940, a member of glycosyltransferase family 47 that is involved in secondary cell wall biosynthesis. It exhibits high sequence similarity to tobacco (Nicotiana plumbaginifolia) pectin glucuronyltransferase. Protein has a domain that shares significant similarity with the pfam03016 domain. It is expressed specifically in developing vessels and fiber cells, and FRA8 is targeted to Golgi. Mutants have irregular xylem formation, reduced cellulose levels and plants are smaller than normal siblings.; FRAGILE FIBER 8 (FRA8); CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: FRA8 homolog (TAIR:AT5G22940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36239 : 227.0) no description available & (gnl|cdd|66673 : 201.0) no description available & (reliability: 1112.0) & (original description: Putative IRX7, Description = Probable glucuronoxylan glucuronosyltransferase IRX7, PFAM = PF03016)' T '10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf08580_62111-68104' '(at2g37090 : 377.0) The IRX9 gene encodes a putative family 43 glycosyl transferase. It was coordinately expressed with the cellulose synthase subunits during secondary cell wall formation. Cell wall analysis revealed a decrease in the abundance of xylan in the irx9 mutant, indicating that IRX9 is required for xylan synthesis. Mutants have irregular xylem phenotype suggesting a role in secondary cell wall biosynthesis.; IRREGULAR XYLEM 9 (IRX9); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 43 (InterPro:IPR005027); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G27600.2); Has 591 Blast hits to 584 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 323; Fungi - 0; Plants - 254; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|48336 : 207.0) no description available & (gnl|cdd|36689 : 197.0) no description available & (reliability: 754.0) & (original description: Putative IRX9, Description = Probable beta-1,4-xylosyltransferase IRX9, PFAM = PF03360)' T '10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf09127_101260-105762' '(at1g54940 : 496.0) plant glycogenin-like starch initiation protein 4 (PGSIP4); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 5 (TAIR:AT1G08990.1); Has 1335 Blast hits to 1329 proteins in 289 species: Archae - 0; Bacteria - 103; Metazoa - 257; Fungi - 309; Plants - 506; Viruses - 75; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|37161 : 208.0) no description available & (gnl|cdd|85496 : 117.0) no description available & (reliability: 912.0) & (original description: Putative GUX4, Description = Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4, PFAM = PF01501)' T '10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf09791_50340-53377' '(at3g50760 : 464.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 2 (GATL2); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G19300.1); Has 1885 Blast hits to 1878 proteins in 434 species: Archae - 2; Bacteria - 935; Metazoa - 151; Fungi - 0; Plants - 716; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|85496 : 178.0) no description available & (reliability: 870.0) & (original description: Putative PGSC0003DMG400010088, Description = Hexosyltransferase, PFAM = PF01501)' T '10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf13041_295779-303187' '(at4g33330 : 726.0) plant glycogenin-like starch initiation protein 3 (PGSIP3); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, sperm cell, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 1 (TAIR:AT3G18660.1); Has 1395 Blast hits to 1389 proteins in 311 species: Archae - 0; Bacteria - 157; Metazoa - 262; Fungi - 295; Plants - 509; Viruses - 75; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|37161 : 238.0) no description available & (gnl|cdd|85496 : 135.0) no description available & (reliability: 1452.0) & (original description: Putative GUX2, Description = UDP-glucuronate:xylan alpha-glucuronosyltransferase 2, PFAM = PF01501)' T '10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf13644_111584-116598' '(at5g54690 : 810.0) Encodes a protein with putative galacturonosyltransferase activity. Mutants defective in this gene displayed a notable reduction in xylose (>50%) in the cell walls from stems and roots and a reduction in cellulose (~25%).; galacturonosyltransferase 12 (GAUT12); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 13 (TAIR:AT3G01040.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85496 : 180.0) no description available & (reliability: 1620.0) & (original description: Putative GAUT12, Description = Probable galacturonosyltransferase 12, PFAM = PF01501)' T '10.3.2' 'cell wall.hemicellulose synthesis.glucuronoxylan' 'niben101scf18061_95304-98395' '(at3g50760 : 471.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 2 (GATL2); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G19300.1); Has 1885 Blast hits to 1878 proteins in 434 species: Archae - 2; Bacteria - 935; Metazoa - 151; Fungi - 0; Plants - 716; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|85496 : 189.0) no description available & (reliability: 922.0) & (original description: Putative GATL2, Description = Probable galacturonosyltransferase-like 2, PFAM = PF01501)' T '10.3.3' 'cell wall.hemicellulose synthesis.arabinoxylan' '' '' '10.3.4' 'cell wall.hemicellulose synthesis.glucomannan' '' '' '10.3.5' 'cell wall.hemicellulose synthesis.galactomannan' '' '' '10.4' 'cell wall.pectin synthesis' 'nbv0.5scaffold2392_117686-122409' '(at3g02350 : 803.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 9 (GAUT9); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT3G25140.1); Has 1426 Blast hits to 1422 proteins in 244 species: Archae - 0; Bacteria - 444; Metazoa - 141; Fungi - 7; Plants - 818; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|85496 : 179.0) no description available & (reliability: 1450.0) & (original description: Putative GAUT9, Description = Probable galacturonosyltransferase 9, PFAM = PF01501)' T '10.4' 'cell wall.pectin synthesis' 'niben044scf00016850ctg021_3468-8229' '(at3g02350 : 802.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 9 (GAUT9); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT3G25140.1); Has 1426 Blast hits to 1422 proteins in 244 species: Archae - 0; Bacteria - 444; Metazoa - 141; Fungi - 7; Plants - 818; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|85496 : 184.0) no description available & (reliability: 1450.0) & (original description: Putative GAUT9, Description = Probable galacturonosyltransferase 9, PFAM = PF01501)' T '10.4' 'cell wall.pectin synthesis' 'niben101scf07720_89215-94524' '(at3g25140 : 859.0) Quasimodo1, encodes a glycosyltransferase, involved in homogalacturonan biosynthesis; mutant shows cell adhesion defect and lower wall uronic acid content.; QUASIMODO 1 (QUA1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process, pectin biosynthetic process, homogalacturonan biosynthetic process; LOCATED IN: mitochondrion, Golgi apparatus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 9 (TAIR:AT3G02350.1); Has 1333 Blast hits to 1331 proteins in 208 species: Archae - 0; Bacteria - 350; Metazoa - 145; Fungi - 2; Plants - 818; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|85496 : 190.0) no description available & (reliability: 1718.0) & (original description: Putative GAUT8, Description = Galacturonosyltransferase 8, PFAM = PF01501)' T '10.4.1' 'cell wall.pectin synthesis.homogalacturonan' '' '' '10.4.1.1' 'cell wall.pectin synthesis.homogalacturonan.Galacturonic Acid Trnasferase' 'nbv0.3scaffold70115_1321-7076' '(at3g61130 : 1010.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 1 (GAUT1); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 3 (TAIR:AT4G38270.2); Has 1521 Blast hits to 1503 proteins in 273 species: Archae - 4; Bacteria - 491; Metazoa - 148; Fungi - 2; Plants - 840; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|85496 : 188.0) no description available & (reliability: 2020.0) & (original description: Putative GAUT1, Description = Polygalacturonate 4-alpha-galacturonosyltransferase, PFAM = PF01501)' T '10.4.1.1' 'cell wall.pectin synthesis.homogalacturonan.Galacturonic Acid Trnasferase' 'niben101scf04294_505845-512150' '(at4g38270 : 776.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 3 (GAUT3); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 1 (TAIR:AT3G61130.1). & (gnl|cdd|85496 : 192.0) no description available & (reliability: 1424.0) & (original description: Putative GAUT3, Description = Probable galacturonosyltransferase 3, PFAM = PF01501)' T '10.4.1.1' 'cell wall.pectin synthesis.homogalacturonan.Galacturonic Acid Trnasferase' 'niben101scf05118_48289-59356' '(at3g61130 : 915.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 1 (GAUT1); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 3 (TAIR:AT4G38270.2); Has 1521 Blast hits to 1503 proteins in 273 species: Archae - 4; Bacteria - 491; Metazoa - 148; Fungi - 2; Plants - 840; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|85496 : 199.0) no description available & (reliability: 1830.0) & (original description: Putative GAUT1, Description = Polygalacturonate 4-alpha-galacturonosyltransferase, PFAM = PF01501)' T '10.4.2' 'cell wall.pectin synthesis.rhamnogalacturonan I' '' '' '10.4.3' 'cell wall.pectin synthesis.rhamnogalacturonan II' '' '' '10.4.3.6' 'cell wall.pectin synthesis.rhamnogalacturonan II.Xylose Transferase with Fucose Acceptor' 'niben101scf01756_107844-114511' '(at4g01220 : 508.0) Nucleotide-diphospho-sugar transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: rhamnogalacturonan xylosyltransferase 2 (TAIR:AT4G01750.1); Has 275 Blast hits to 271 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 259; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 1016.0) & (original description: Putative MGP4, Description = UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4, PFAM = PF03407)' T '10.4.4' 'cell wall.pectin synthesis.Xylogalacturonan' '' '' '10.4.4.1' 'cell wall.pectin synthesis.Xylogalacturonan.Xylose Transferase' 'niben101scf12673_132961-138842' '(at5g11130 : 450.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G20260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36239 : 283.0) no description available & (gnl|cdd|66673 : 180.0) no description available & (reliability: 810.0) & (original description: Putative XGD1, Description = Exostosin family protein, PFAM = PF03016)' T '10.5' 'cell wall.cell wall proteins' 'nbv0.3scaffold18891_26701-33011' '(at3g48530 : 496.0) SNF1-related protein kinase regulatory subunit gamma 1 (KING1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) protein (TAIR:AT1G69800.1); Has 3278 Blast hits to 3263 proteins in 1076 species: Archae - 152; Bacteria - 2121; Metazoa - 342; Fungi - 134; Plants - 135; Viruses - 0; Other Eukaryotes - 394 (source: NCBI BLink). & (gnl|cdd|36975 : 225.0) no description available & (gnl|cdd|73140 : 134.0) no description available & (reliability: 992.0) & (original description: Putative KING1, Description = SNF1-related protein kinase regulatory subunit gamma-1, PFAM = PF00571;PF00571;PF00571)' T '10.5' 'cell wall.cell wall proteins' 'niben101scf04754_262538-265584' '(at3g58800 : 368.0) unknown protein; Has 75 Blast hits to 75 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 17; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 736.0) & (original description: Putative BnaC08g29550D, Description = BnaC08g29550D protein, PFAM = )' T '10.5' 'cell wall.cell wall proteins' 'niben101scf07244_415501-418580' '(at3g58800 : 373.0) unknown protein; Has 75 Blast hits to 75 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 17; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 746.0) & (original description: Putative BnaC08g29550D, Description = BnaC08g29550D protein, PFAM = )' T '10.5' 'cell wall.cell wall proteins' 'niben101scf09025_76950-83802' '(at3g48530 : 533.0) SNF1-related protein kinase regulatory subunit gamma 1 (KING1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) protein (TAIR:AT1G69800.1); Has 3278 Blast hits to 3263 proteins in 1076 species: Archae - 152; Bacteria - 2121; Metazoa - 342; Fungi - 134; Plants - 135; Viruses - 0; Other Eukaryotes - 394 (source: NCBI BLink). & (gnl|cdd|36975 : 224.0) no description available & (gnl|cdd|73140 : 134.0) no description available & (reliability: 1066.0) & (original description: Putative KING1, Description = SNF1-related protein kinase regulatory subunit gamma-1, PFAM = PF00571;PF00571;PF00571)' T '10.5.1' 'cell wall.cell wall proteins.AGPs' '' '' '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'nbv0.3scaffold5812_20151-22867' '(at5g60490 : 173.0) FASCICLIN-like arabinogalactan-protein 12 (FLA12); LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan-protein 11 (TAIR:AT5G03170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative fla11, Description = Fasciclin-like arabinogalactan protein 11, PFAM = PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'nbv0.3scaffold6794_16477-19745' '(at3g46550 : 328.0) Isolated in a screen for salt hypersensitive mutants. Mutants have thinner cell walls, abnormal siliques and root growth is inhibited under salt stress. The gene has similarity to arabinogalactan proteins and domains associated with cell adhesion.; salt overly sensitive 5 (SOS5); FUNCTIONS IN: polysaccharide binding; INVOLVED IN: multidimensional cell growth, cell adhesion, response to stress; LOCATED IN: anchored to plasma membrane, plasma membrane, external side of plasma membrane, anchored to membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 8 (TAIR:AT2G45470.1); Has 1011 Blast hits to 932 proteins in 123 species: Archae - 6; Bacteria - 104; Metazoa - 24; Fungi - 33; Plants - 770; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative FLA4, Description = Fasciclin-like arabinogalactan protein 4, PFAM = PF02469;PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'nbv0.3scaffold39249_7121-9945' '(at2g24450 : 130.0) FASCICLIN-like arabinogalactan protein 3 precursor (FLA3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: anchored to membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 5 precursor (TAIR:AT4G31370.1); Has 10338 Blast hits to 6301 proteins in 702 species: Archae - 8; Bacteria - 2389; Metazoa - 2056; Fungi - 1063; Plants - 2613; Viruses - 640; Other Eukaryotes - 1569 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative FLA14, Description = Fasciclin-like arabinogalactan protein 14, PFAM = PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'nbv0.3scaffold41912_11810-16865' '(at5g06390 : 587.0) FASCICLIN-like arabinogalactan protein 17 precursor (FLA17); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell adhesion; LOCATED IN: vacuole; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 18 precursor (TAIR:AT3G11700.1); Has 803 Blast hits to 777 proteins in 229 species: Archae - 10; Bacteria - 420; Metazoa - 40; Fungi - 21; Plants - 196; Viruses - 1; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|36650 : 341.0) no description available & (reliability: 1174.0) & (original description: Putative FLA16, Description = Fasciclin-like arabinogalactan protein 16, PFAM = PF02469;PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'nbv0.3scaffold67264_1-4121' '(at4g12730 : 336.0) AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds; FASCICLIN-like arabinogalactan 2 (FLA2); INVOLVED IN: response to cyclopentenone; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan 1 (TAIR:AT5G55730.2); Has 750 Blast hits to 734 proteins in 58 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 13; Plants - 722; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 672.0) & (original description: Putative AGP4, Description = Fasciclin-like arabinogalactan protein 10, PFAM = PF02469;PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'nbv0.3scaffold96481_1159-4424' '(at4g12730 : 386.0) AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds; FASCICLIN-like arabinogalactan 2 (FLA2); INVOLVED IN: response to cyclopentenone; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan 1 (TAIR:AT5G55730.2); Has 750 Blast hits to 734 proteins in 58 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 13; Plants - 722; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 772.0) & (original description: Putative AGP4, Description = Fasciclin-like arabinogalactan protein 10, PFAM = PF02469;PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'nbv0.5scaffold702_273408-278588' '(at5g06390 : 560.0) FASCICLIN-like arabinogalactan protein 17 precursor (FLA17); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell adhesion; LOCATED IN: vacuole; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 18 precursor (TAIR:AT3G11700.1); Has 803 Blast hits to 777 proteins in 229 species: Archae - 10; Bacteria - 420; Metazoa - 40; Fungi - 21; Plants - 196; Viruses - 1; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|36650 : 311.0) no description available & (reliability: 1120.0) & (original description: Putative FLA14, Description = Fasciclin-like arabinogalactan protein 16, PFAM = PF02469;PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'nbv0.5scaffold2183_287413-290747' '(at4g12730 : 387.0) AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds; FASCICLIN-like arabinogalactan 2 (FLA2); INVOLVED IN: response to cyclopentenone; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan 1 (TAIR:AT5G55730.2); Has 750 Blast hits to 734 proteins in 58 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 13; Plants - 722; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 774.0) & (original description: Putative AGP4, Description = Fasciclin-like arabinogalactan protein 10, PFAM = PF02469;PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'nbv0.5scaffold6802_64150-67035' '(at5g60490 : 178.0) FASCICLIN-like arabinogalactan-protein 12 (FLA12); LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan-protein 11 (TAIR:AT5G03170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative FLA5, Description = Fasciclin-like arabinogalactan protein 5, PFAM = PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben044scf00027714ctg002_30078-33571' '(at3g46550 : 346.0) Isolated in a screen for salt hypersensitive mutants. Mutants have thinner cell walls, abnormal siliques and root growth is inhibited under salt stress. The gene has similarity to arabinogalactan proteins and domains associated with cell adhesion.; salt overly sensitive 5 (SOS5); FUNCTIONS IN: polysaccharide binding; INVOLVED IN: multidimensional cell growth, cell adhesion, response to stress; LOCATED IN: anchored to plasma membrane, plasma membrane, external side of plasma membrane, anchored to membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 8 (TAIR:AT2G45470.1); Has 1011 Blast hits to 932 proteins in 123 species: Archae - 6; Bacteria - 104; Metazoa - 24; Fungi - 33; Plants - 770; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 692.0) & (original description: Putative FLA4, Description = Fasciclin-like arabinogalactan protein 4, PFAM = PF02469;PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben044scf00037788ctg003_21039-24179' '(at5g03170 : 174.0) FASCICLIN-like arabinogalactan-protein 11 (FLA11); CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan-protein 12 (TAIR:AT5G60490.1); Has 965 Blast hits to 948 proteins in 162 species: Archae - 18; Bacteria - 233; Metazoa - 22; Fungi - 18; Plants - 634; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative FLA11, Description = Fasciclin-like arabinogalactan protein 11, PFAM = PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben044scf00058600ctg000_1-3349' '(at4g12730 : 384.0) AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds; FASCICLIN-like arabinogalactan 2 (FLA2); INVOLVED IN: response to cyclopentenone; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan 1 (TAIR:AT5G55730.2); Has 750 Blast hits to 734 proteins in 58 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 13; Plants - 722; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 768.0) & (original description: Putative FLA2, Description = Fasciclin-like arabinogalactan protein 2, PFAM = PF02469;PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben044scf00061760ctg000_324-3592' '(at3g46550 : 332.0) Isolated in a screen for salt hypersensitive mutants. Mutants have thinner cell walls, abnormal siliques and root growth is inhibited under salt stress. The gene has similarity to arabinogalactan proteins and domains associated with cell adhesion.; salt overly sensitive 5 (SOS5); FUNCTIONS IN: polysaccharide binding; INVOLVED IN: multidimensional cell growth, cell adhesion, response to stress; LOCATED IN: anchored to plasma membrane, plasma membrane, external side of plasma membrane, anchored to membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 8 (TAIR:AT2G45470.1); Has 1011 Blast hits to 932 proteins in 123 species: Archae - 6; Bacteria - 104; Metazoa - 24; Fungi - 33; Plants - 770; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 664.0) & (original description: Putative FLA4, Description = Fasciclin-like arabinogalactan protein 4, PFAM = PF02469;PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf00468_100049-103317' '(at3g46550 : 335.0) Isolated in a screen for salt hypersensitive mutants. Mutants have thinner cell walls, abnormal siliques and root growth is inhibited under salt stress. The gene has similarity to arabinogalactan proteins and domains associated with cell adhesion.; salt overly sensitive 5 (SOS5); FUNCTIONS IN: polysaccharide binding; INVOLVED IN: multidimensional cell growth, cell adhesion, response to stress; LOCATED IN: anchored to plasma membrane, plasma membrane, external side of plasma membrane, anchored to membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 8 (TAIR:AT2G45470.1); Has 1011 Blast hits to 932 proteins in 123 species: Archae - 6; Bacteria - 104; Metazoa - 24; Fungi - 33; Plants - 770; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 670.0) & (original description: Putative FLA4, Description = Fasciclin-like arabinogalactan protein 4, PFAM = PF02469;PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf00509_87949-91039' '(at5g03170 : 184.0) FASCICLIN-like arabinogalactan-protein 11 (FLA11); CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan-protein 12 (TAIR:AT5G60490.1); Has 965 Blast hits to 948 proteins in 162 species: Archae - 18; Bacteria - 233; Metazoa - 22; Fungi - 18; Plants - 634; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative FLA11, Description = Fasciclin-like arabinogalactan protein 11, PFAM = PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf00550_46136-49401' '(at2g45470 : 382.0) FASCICLIN-like arabinogalactan protein 8 (FLA8); LOCATED IN: anchored to plasma membrane, apoplast, plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan-protein 10 (TAIR:AT3G60900.1); Has 14155 Blast hits to 6880 proteins in 856 species: Archae - 79; Bacteria - 4506; Metazoa - 1333; Fungi - 788; Plants - 1999; Viruses - 868; Other Eukaryotes - 4582 (source: NCBI BLink). & (reliability: 764.0) & (original description: Putative FLA10, Description = Fasciclin-like arabinogalactan protein 10, PFAM = PF02469;PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf00788_421623-424441' '(at2g24450 : 137.0) FASCICLIN-like arabinogalactan protein 3 precursor (FLA3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: anchored to membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 5 precursor (TAIR:AT4G31370.1); Has 10338 Blast hits to 6301 proteins in 702 species: Archae - 8; Bacteria - 2389; Metazoa - 2056; Fungi - 1063; Plants - 2613; Viruses - 640; Other Eukaryotes - 1569 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative FLA14, Description = Fasciclin-like arabinogalactan protein 14, PFAM = PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf00788_459812-462636' '(at2g24450 : 130.0) FASCICLIN-like arabinogalactan protein 3 precursor (FLA3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: anchored to membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 5 precursor (TAIR:AT4G31370.1); Has 10338 Blast hits to 6301 proteins in 702 species: Archae - 8; Bacteria - 2389; Metazoa - 2056; Fungi - 1063; Plants - 2613; Viruses - 640; Other Eukaryotes - 1569 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative BnaA09g41380D, Description = BnaA09g41380D protein, PFAM = PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf00861_809290-816049' '(at5g06390 : 571.0) FASCICLIN-like arabinogalactan protein 17 precursor (FLA17); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell adhesion; LOCATED IN: vacuole; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 18 precursor (TAIR:AT3G11700.1); Has 803 Blast hits to 777 proteins in 229 species: Archae - 10; Bacteria - 420; Metazoa - 40; Fungi - 21; Plants - 196; Viruses - 1; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|36650 : 347.0) no description available & (reliability: 1142.0) & (original description: Putative FLA17, Description = Fasciclin-like arabinogalactan protein 17, PFAM = PF02469;PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf01037_931298-934098' '(at2g04780 : 212.0) fasciclin-like arabinogalactan-protein 7 (Fla7); FASCICLIN-like arabinoogalactan 7 (FLA7); LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan 6 (TAIR:AT2G20520.1); Has 713 Blast hits to 707 proteins in 79 species: Archae - 4; Bacteria - 65; Metazoa - 1; Fungi - 0; Plants - 633; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 424.0) & (original description: Putative FLA7, Description = Fasciclin-like arabinogalactan protein 7, PFAM = PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf01484_42413-47961' '(at5g06390 : 576.0) FASCICLIN-like arabinogalactan protein 17 precursor (FLA17); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell adhesion; LOCATED IN: vacuole; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 18 precursor (TAIR:AT3G11700.1); Has 803 Blast hits to 777 proteins in 229 species: Archae - 10; Bacteria - 420; Metazoa - 40; Fungi - 21; Plants - 196; Viruses - 1; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|36650 : 335.0) no description available & (reliability: 1152.0) & (original description: Putative FLA15, Description = Fasciclin-like arabinogalactan protein 15, PFAM = PF02469;PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf01535_172135-176164' '(at5g55730 : 185.0) fasciclin-like arabinogalactan-protein 1 (Fla1); FASCICLIN-like arabinogalactan 1 (FLA1); CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan 2 (TAIR:AT4G12730.1). & (reliability: 370.0) & (original description: Putative FLA, Description = Fasciclin-like arabinogalactan protein 10, PFAM = PF02469;PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf01911_35926-38669' '(at5g03170 : 192.0) FASCICLIN-like arabinogalactan-protein 11 (FLA11); CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan-protein 12 (TAIR:AT5G60490.1); Has 965 Blast hits to 948 proteins in 162 species: Archae - 18; Bacteria - 233; Metazoa - 22; Fungi - 18; Plants - 634; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative FLA11, Description = Fasciclin-like arabinogalactan protein 11, PFAM = PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf03271_310394-313203' '(at5g55730 : 185.0) fasciclin-like arabinogalactan-protein 1 (Fla1); FASCICLIN-like arabinogalactan 1 (FLA1); CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan 2 (TAIR:AT4G12730.1). & (reliability: 370.0) & (original description: Putative FLA, Description = Fasciclin-like arabinogalactan protein 10, PFAM = PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf03563_163934-166734' '(at2g04780 : 209.0) fasciclin-like arabinogalactan-protein 7 (Fla7); FASCICLIN-like arabinoogalactan 7 (FLA7); LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan 6 (TAIR:AT2G20520.1); Has 713 Blast hits to 707 proteins in 79 species: Archae - 4; Bacteria - 65; Metazoa - 1; Fungi - 0; Plants - 633; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 418.0) & (original description: Putative FLA7, Description = Fasciclin-like arabinogalactan protein 7, PFAM = PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf03757_197274-202454' '(at5g06390 : 565.0) FASCICLIN-like arabinogalactan protein 17 precursor (FLA17); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell adhesion; LOCATED IN: vacuole; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 18 precursor (TAIR:AT3G11700.1); Has 803 Blast hits to 777 proteins in 229 species: Archae - 10; Bacteria - 420; Metazoa - 40; Fungi - 21; Plants - 196; Viruses - 1; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|36650 : 336.0) no description available & (reliability: 1130.0) & (original description: Putative FLA17, Description = Fasciclin-like arabinogalactan protein 17, PFAM = PF02469;PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf04650_710081-713301' '(at4g12730 : 389.0) AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds; FASCICLIN-like arabinogalactan 2 (FLA2); INVOLVED IN: response to cyclopentenone; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan 1 (TAIR:AT5G55730.2); Has 750 Blast hits to 734 proteins in 58 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 13; Plants - 722; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 778.0) & (original description: Putative AGP4, Description = Fasciclin-like arabinogalactan protein 10, PFAM = PF02469;PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf04792_333988-336740' '(at1g03870 : 174.0) fasciclin-like arabinogalactan-protein 9 (Fla9); FASCICLIN-like arabinoogalactan 9 (FLA9); LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 13 precursor (TAIR:AT5G44130.1); Has 1005 Blast hits to 985 proteins in 182 species: Archae - 18; Bacteria - 304; Metazoa - 15; Fungi - 9; Plants - 624; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative FLA4, Description = Fasciclin-like arabinogalactan protein 4, PFAM = PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf04813_66137-69402' '(at2g45470 : 381.0) FASCICLIN-like arabinogalactan protein 8 (FLA8); LOCATED IN: anchored to plasma membrane, apoplast, plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan-protein 10 (TAIR:AT3G60900.1); Has 14155 Blast hits to 6880 proteins in 856 species: Archae - 79; Bacteria - 4506; Metazoa - 1333; Fungi - 788; Plants - 1999; Viruses - 868; Other Eukaryotes - 4582 (source: NCBI BLink). & (reliability: 762.0) & (original description: Putative FLA10, Description = Fasciclin-like arabinogalactan protein 10, PFAM = PF02469;PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf04847_64964-68150' '(at5g55730 : 401.0) fasciclin-like arabinogalactan-protein 1 (Fla1); FASCICLIN-like arabinogalactan 1 (FLA1); CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan 2 (TAIR:AT4G12730.1). & (reliability: 802.0) & (original description: Putative BnaA03g11240D, Description = BnaA03g11240D protein, PFAM = PF02469;PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf05372_250065-252814' '(at5g03170 : 185.0) FASCICLIN-like arabinogalactan-protein 11 (FLA11); CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan-protein 12 (TAIR:AT5G60490.1); Has 965 Blast hits to 948 proteins in 162 species: Archae - 18; Bacteria - 233; Metazoa - 22; Fungi - 18; Plants - 634; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 370.0) & (original description: Putative FLA11, Description = Fasciclin-like arabinogalactan protein 11, PFAM = PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf05486_167069-169842' '(at5g60490 : 163.0) FASCICLIN-like arabinogalactan-protein 12 (FLA12); LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan-protein 11 (TAIR:AT5G03170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative fla11, Description = Fasciclin-like arabinogalactan protein 11, PFAM = PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf05667_216682-219941' '(at3g46550 : 339.0) Isolated in a screen for salt hypersensitive mutants. Mutants have thinner cell walls, abnormal siliques and root growth is inhibited under salt stress. The gene has similarity to arabinogalactan proteins and domains associated with cell adhesion.; salt overly sensitive 5 (SOS5); FUNCTIONS IN: polysaccharide binding; INVOLVED IN: multidimensional cell growth, cell adhesion, response to stress; LOCATED IN: anchored to plasma membrane, plasma membrane, external side of plasma membrane, anchored to membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 8 (TAIR:AT2G45470.1); Has 1011 Blast hits to 932 proteins in 123 species: Archae - 6; Bacteria - 104; Metazoa - 24; Fungi - 33; Plants - 770; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 678.0) & (original description: Putative FLA4, Description = Fasciclin-like arabinogalactan protein 4, PFAM = PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf06123_80857-105022' '(at5g60490 : 181.0) FASCICLIN-like arabinogalactan-protein 12 (FLA12); LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan-protein 11 (TAIR:AT5G03170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative fla11, Description = Putative cell surface adhesion protein, PFAM = PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf06123_91993-94763' '(at5g60490 : 167.0) FASCICLIN-like arabinogalactan-protein 12 (FLA12); LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan-protein 11 (TAIR:AT5G03170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85998 : 80.4) no description available & (reliability: 334.0) & (original description: Putative FLA5, Description = Fasciclin-like arabinogalactan protein 5, PFAM = PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf06156_454534-457433' '(at3g12660 : 115.0) fasciclin-like arabinogalactan-protein, family (FLA14); FASCICLIN-like arabinogalactan protein 14 precursor (FLA14); CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 8 (TAIR:AT2G45470.1); Has 278 Blast hits to 274 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 7; Plants - 267; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative FLA14, Description = Fasciclin-like arabinogalactan protein 14, PFAM = )' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf08199_251306-259678' '(at3g46550 : 333.0) Isolated in a screen for salt hypersensitive mutants. Mutants have thinner cell walls, abnormal siliques and root growth is inhibited under salt stress. The gene has similarity to arabinogalactan proteins and domains associated with cell adhesion.; salt overly sensitive 5 (SOS5); FUNCTIONS IN: polysaccharide binding; INVOLVED IN: multidimensional cell growth, cell adhesion, response to stress; LOCATED IN: anchored to plasma membrane, plasma membrane, external side of plasma membrane, anchored to membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 8 (TAIR:AT2G45470.1); Has 1011 Blast hits to 932 proteins in 123 species: Archae - 6; Bacteria - 104; Metazoa - 24; Fungi - 33; Plants - 770; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 666.0) & (original description: Putative FLA9, Description = Fasciclin-like arabinogalactan protein 9, PFAM = PF02469;PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf08300_59937-62689' '(at1g03870 : 179.0) fasciclin-like arabinogalactan-protein 9 (Fla9); FASCICLIN-like arabinoogalactan 9 (FLA9); LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 13 precursor (TAIR:AT5G44130.1); Has 1005 Blast hits to 985 proteins in 182 species: Archae - 18; Bacteria - 304; Metazoa - 15; Fungi - 9; Plants - 624; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative FLA6, Description = Fasciclin-like arabinogalactan protein 6, PFAM = PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf08370_127687-130931' '(at5g55730 : 400.0) fasciclin-like arabinogalactan-protein 1 (Fla1); FASCICLIN-like arabinogalactan 1 (FLA1); CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan 2 (TAIR:AT4G12730.1). & (reliability: 800.0) & (original description: Putative FLA2, Description = Fasciclin-like arabinogalactan protein 2, PFAM = PF02469;PF02469)' T '10.5.1.1' 'cell wall.cell wall proteins.AGPs.AGP' 'niben101scf32632_6874-11087' '(at4g12730 : 332.0) AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds; FASCICLIN-like arabinogalactan 2 (FLA2); INVOLVED IN: response to cyclopentenone; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan 1 (TAIR:AT5G55730.2); Has 750 Blast hits to 734 proteins in 58 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 13; Plants - 722; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 664.0) & (original description: Putative Sb02g019380, Description = Putative uncharacterized protein Sb02g019380, PFAM = PF02469;PF02469)' T '10.5.1.2' 'cell wall.cell wall proteins.AGPs.AGP Fucosyltransferase' '' '' '10.5.2' 'cell wall.cell wall proteins.proline rich proteins' 'nbv0.3scaffold96548_1-2096' '(at4g38770 : 92.4) Encodes one of four proline-rich proteins in Arabidopsis which are predicted to localize to the cell wall. Transcripts are most abundant in aerial organs of the plant.; proline-rich protein 4 (PRP4); CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: proline-rich protein 2 (TAIR:AT2G21140.1); Has 142477 Blast hits to 44863 proteins in 2266 species: Archae - 463; Bacteria - 33947; Metazoa - 50713; Fungi - 14839; Plants - 19672; Viruses - 4087; Other Eukaryotes - 18756 (source: NCBI BLink). & (gnl|cdd|70214 : 83.6) no description available & (reliability: 184.8) & (original description: Putative gpp1, Description = Proline-rich protein 2, PFAM = PF01190)' T '10.5.2' 'cell wall.cell wall proteins.proline rich proteins' 'niben044scf00002857ctg006_5462-9318' '(at4g38770 : 122.0) Encodes one of four proline-rich proteins in Arabidopsis which are predicted to localize to the cell wall. Transcripts are most abundant in aerial organs of the plant.; proline-rich protein 4 (PRP4); CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: proline-rich protein 2 (TAIR:AT2G21140.1); Has 142477 Blast hits to 44863 proteins in 2266 species: Archae - 463; Bacteria - 33947; Metazoa - 50713; Fungi - 14839; Plants - 19672; Viruses - 4087; Other Eukaryotes - 18756 (source: NCBI BLink). & (gnl|cdd|70214 : 83.2) no description available & (reliability: 244.0) & (original description: Putative gpp1, Description = Proline-rich protein 2, PFAM = PF01190)' T '10.5.2' 'cell wall.cell wall proteins.proline rich proteins' 'niben101scf01847_276900-280895' '(at4g38770 : 117.0) Encodes one of four proline-rich proteins in Arabidopsis which are predicted to localize to the cell wall. Transcripts are most abundant in aerial organs of the plant.; proline-rich protein 4 (PRP4); CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: proline-rich protein 2 (TAIR:AT2G21140.1); Has 142477 Blast hits to 44863 proteins in 2266 species: Archae - 463; Bacteria - 33947; Metazoa - 50713; Fungi - 14839; Plants - 19672; Viruses - 4087; Other Eukaryotes - 18756 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative PRP2, Description = Proline-rich protein 2, PFAM = PF01190)' T '10.5.2' 'cell wall.cell wall proteins.proline rich proteins' 'niben101scf04327_200596-211464' '(gnl|cdd|70214 : 108.0) no description available & (at4g38770 : 96.7) Encodes one of four proline-rich proteins in Arabidopsis which are predicted to localize to the cell wall. Transcripts are most abundant in aerial organs of the plant.; proline-rich protein 4 (PRP4); CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: proline-rich protein 2 (TAIR:AT2G21140.1); Has 142477 Blast hits to 44863 proteins in 2266 species: Archae - 463; Bacteria - 33947; Metazoa - 50713; Fungi - 14839; Plants - 19672; Viruses - 4087; Other Eukaryotes - 18756 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative gpp1, Description = Proline-rich protein 2, PFAM = PF01190)' T '10.5.3' 'cell wall.cell wall proteins.LRR' 'nbv0.3scaffold1438_54752-58893' '(at1g62440 : 454.0) encodes a paralog of LRX1 (LEUCINE-RICH REPEAT/EXTENSIN 1) which acts synergistically with LRX1 in root hair cell morphogenesis.; leucine-rich repeat/extensin 2 (LRX2); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: leucine-rich repeat/extensin 1 (TAIR:AT1G12040.1); Has 394418 Blast hits to 112735 proteins in 3055 species: Archae - 811; Bacteria - 65245; Metazoa - 131456; Fungi - 52175; Plants - 95400; Viruses - 7676; Other Eukaryotes - 41655 (source: NCBI BLink). & (p93194|rpk1_iponi : 111.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35528 : 94.0) no description available & (reliability: 908.0) & (original description: Putative LRX6, Description = Leucine-rich repeat extensin-like protein 6, PFAM = PF13855)' T '10.5.3' 'cell wall.cell wall proteins.LRR' 'nbv0.3scaffold53701_5498-10366' '(at3g24480 : 579.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G13340.1); Has 128997 Blast hits to 49133 proteins in 1941 species: Archae - 161; Bacteria - 13645; Metazoa - 31793; Fungi - 8450; Plants - 59695; Viruses - 2612; Other Eukaryotes - 12641 (source: NCBI BLink). & (p93194|rpk1_iponi : 121.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35528 : 111.0) no description available & (gnl|cdd|75061 : 85.5) no description available & (reliability: 1158.0) & (original description: Putative LRX7, Description = Leucine-rich repeat extensin-like protein 7, PFAM = )' T '10.5.3' 'cell wall.cell wall proteins.LRR' 'nbv0.5scaffold991_252105-256973' '(at3g24480 : 579.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G13340.1); Has 128997 Blast hits to 49133 proteins in 1941 species: Archae - 161; Bacteria - 13645; Metazoa - 31793; Fungi - 8450; Plants - 59695; Viruses - 2612; Other Eukaryotes - 12641 (source: NCBI BLink). & (p93194|rpk1_iponi : 121.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35528 : 111.0) no description available & (gnl|cdd|75061 : 85.1) no description available & (reliability: 1158.0) & (original description: Putative BnaA03g38910D, Description = BnaA03g38910D protein, PFAM = )' T '10.5.3' 'cell wall.cell wall proteins.LRR' 'nbv0.5scaffold2982_273357-276976' '(at2g15880 : 491.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G33970.1); Has 436796 Blast hits to 106000 proteins in 3186 species: Archae - 830; Bacteria - 85977; Metazoa - 139472; Fungi - 51372; Plants - 100247; Viruses - 9779; Other Eukaryotes - 49119 (source: NCBI BLink). & (p93194|rpk1_iponi : 113.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 982.0) & (original description: Putative BnaCnng78240D, Description = BnaCnng78240D protein, PFAM = PF13855;PF13855)' T '10.5.3' 'cell wall.cell wall proteins.LRR' 'nbv0.5scaffold3148_173735-177252' '(at4g13340 : 454.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G24480.1); Has 637879 Blast hits to 129296 proteins in 3596 species: Archae - 1468; Bacteria - 134638; Metazoa - 215120; Fungi - 74599; Plants - 120849; Viruses - 14592; Other Eukaryotes - 76613 (source: NCBI BLink). & (p93194|rpk1_iponi : 111.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|37135 : 80.0) no description available & (reliability: 908.0) & (original description: Putative LRX1, Description = Cell wall hydroxyproline-rich glycoprotein, PFAM = PF13855;PF08263;PF12799)' T '10.5.3' 'cell wall.cell wall proteins.LRR' 'nbv0.5scaffold9168_17608-21482' '(at3g19020 : 404.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G49490.1); Has 706755 Blast hits to 161426 proteins in 4337 species: Archae - 1652; Bacteria - 156223; Metazoa - 226544; Fungi - 92124; Plants - 115331; Viruses - 14004; Other Eukaryotes - 100877 (source: NCBI BLink). & (p93194|rpk1_iponi : 124.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|37135 : 95.1) no description available & (gnl|cdd|75061 : 85.9) no description available & (reliability: 808.0) & (original description: Putative BnaA03g38910D, Description = BnaA03g38910D protein, PFAM = PF13855;PF08263)' T '10.5.3' 'cell wall.cell wall proteins.LRR' 'niben044scf00016274ctg010_21976-26104' '(at2g15880 : 388.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G33970.1); Has 436796 Blast hits to 106000 proteins in 3186 species: Archae - 830; Bacteria - 85977; Metazoa - 139472; Fungi - 51372; Plants - 100247; Viruses - 9779; Other Eukaryotes - 49119 (source: NCBI BLink). & (p93194|rpk1_iponi : 112.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35528 : 99.3) no description available & (gnl|cdd|78817 : 92.1) no description available & (reliability: 776.0) & (original description: Putative LRX1, Description = Cell wall hydroxyproline-rich glycoprotein, PFAM = PF08263;PF13855)' T '10.5.3' 'cell wall.cell wall proteins.LRR' 'niben044scf00019394ctg008_1-2725' '(at2g15880 : 484.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G33970.1); Has 436796 Blast hits to 106000 proteins in 3186 species: Archae - 830; Bacteria - 85977; Metazoa - 139472; Fungi - 51372; Plants - 100247; Viruses - 9779; Other Eukaryotes - 49119 (source: NCBI BLink). & (p93194|rpk1_iponi : 113.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|37135 : 84.3) no description available & (reliability: 968.0) & (original description: Putative LRX1, Description = Cell wall hydroxyproline-rich glycoprotein, PFAM = PF13855;PF13855)' T '10.5.3' 'cell wall.cell wall proteins.LRR' 'niben044scf00024482ctg003_5884-9560' '(at3g24480 : 582.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G13340.1); Has 128997 Blast hits to 49133 proteins in 1941 species: Archae - 161; Bacteria - 13645; Metazoa - 31793; Fungi - 8450; Plants - 59695; Viruses - 2612; Other Eukaryotes - 12641 (source: NCBI BLink). & (p93194|rpk1_iponi : 121.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35481 : 110.0) no description available & (gnl|cdd|75061 : 85.5) no description available & (reliability: 1164.0) & (original description: Putative LRX4, Description = Leucine-rich repeat extensin-like protein 4, PFAM = )' T '10.5.3' 'cell wall.cell wall proteins.LRR' 'niben044scf00042991ctg007_9394-14247' '(at3g24480 : 581.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G13340.1); Has 128997 Blast hits to 49133 proteins in 1941 species: Archae - 161; Bacteria - 13645; Metazoa - 31793; Fungi - 8450; Plants - 59695; Viruses - 2612; Other Eukaryotes - 12641 (source: NCBI BLink). & (p93194|rpk1_iponi : 121.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35528 : 109.0) no description available & (gnl|cdd|75061 : 89.0) no description available & (reliability: 1162.0) & (original description: Putative BnaC08g41590D, Description = BnaC08g41590D protein, PFAM = )' T '10.5.3' 'cell wall.cell wall proteins.LRR' 'niben044scf00060166ctg000_1250-4032' '(at3g22800 : 408.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G24480.1); Has 229273 Blast hits to 72952 proteins in 2610 species: Archae - 422; Bacteria - 37303; Metazoa - 68145; Fungi - 17365; Plants - 71911; Viruses - 5341; Other Eukaryotes - 28786 (source: NCBI BLink). & (p93194|rpk1_iponi : 110.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 816.0) & (original description: Putative Sb02g004260, Description = Putative uncharacterized protein Sb02g004260, PFAM = PF13855)' T '10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf00643_138000-212260' '(at4g06744 : 374.0) Leucine-rich repeat (LRR) family protein; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G19320.1); Has 45026 Blast hits to 12967 proteins in 516 species: Archae - 11; Bacteria - 711; Metazoa - 1155; Fungi - 115; Plants - 40928; Viruses - 0; Other Eukaryotes - 2106 (source: NCBI BLink). & (p93194|rpk1_iponi : 109.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 748.0) & (original description: Putative LRX3, Description = Uncharacterized protein At4g06744 family, PFAM = PF00560)' T '10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf01586_225742-230507' '(at3g24480 : 580.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G13340.1); Has 128997 Blast hits to 49133 proteins in 1941 species: Archae - 161; Bacteria - 13645; Metazoa - 31793; Fungi - 8450; Plants - 59695; Viruses - 2612; Other Eukaryotes - 12641 (source: NCBI BLink). & (p93194|rpk1_iponi : 120.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|37135 : 84.3) no description available & (reliability: 1160.0) & (original description: Putative LRX1, Description = Cell wall hydroxyproline-rich glycoprotein, PFAM = )' T '10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf01750_735812-769662' '(at4g13340 : 454.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G24480.1); Has 637879 Blast hits to 129296 proteins in 3596 species: Archae - 1468; Bacteria - 134638; Metazoa - 215120; Fungi - 74599; Plants - 120849; Viruses - 14592; Other Eukaryotes - 76613 (source: NCBI BLink). & (p93194|rpk1_iponi : 111.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|37135 : 80.8) no description available & (reliability: 908.0) & (original description: Putative LRX1, Description = Cell wall hydroxyproline-rich glycoprotein, PFAM = PF12799;PF08263;PF13855)' T '10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf02357_690386-693759' '(at2g42800 : 415.0) receptor like protein 29 (RLP29); LOCATED IN: anchored to membrane, plant-type cell wall; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G80080.1); Has 95156 Blast hits to 31366 proteins in 1102 species: Archae - 33; Bacteria - 5084; Metazoa - 23826; Fungi - 961; Plants - 59193; Viruses - 0; Other Eukaryotes - 6059 (source: NCBI BLink). & (p93194|rpk1_iponi : 110.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35693 : 95.4) no description available & (reliability: 830.0) & (original description: Putative RLP29, Description = At2g42800, PFAM = PF13855;PF13855;PF00560)' T '10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf02390_207304-210701' '(at2g42800 : 409.0) receptor like protein 29 (RLP29); LOCATED IN: anchored to membrane, plant-type cell wall; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G80080.1); Has 95156 Blast hits to 31366 proteins in 1102 species: Archae - 33; Bacteria - 5084; Metazoa - 23826; Fungi - 961; Plants - 59193; Viruses - 0; Other Eukaryotes - 6059 (source: NCBI BLink). & (p93194|rpk1_iponi : 118.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 87.8) no description available & (reliability: 818.0) & (original description: Putative NARK, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF13855;PF13855)' T '10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf03080_481061-485142' '(at3g19020 : 404.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G49490.1); Has 706755 Blast hits to 161426 proteins in 4337 species: Archae - 1652; Bacteria - 156223; Metazoa - 226544; Fungi - 92124; Plants - 115331; Viruses - 14004; Other Eukaryotes - 100877 (source: NCBI BLink). & (p93194|rpk1_iponi : 124.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35528 : 101.0) no description available & (gnl|cdd|75061 : 91.7) no description available & (reliability: 808.0) & (original description: Putative LRX1, Description = Cell wall hydroxyproline-rich glycoprotein, PFAM = PF08263;PF13855)' T '10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf03307_401255-404454' '(at4g29240 : 426.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT2G19780.1); Has 63461 Blast hits to 20951 proteins in 903 species: Archae - 14; Bacteria - 2781; Metazoa - 8815; Fungi - 480; Plants - 47912; Viruses - 34; Other Eukaryotes - 3425 (source: NCBI BLink). & (p93194|rpk1_iponi : 132.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 852.0) & (original description: Putative Os05g0188700, Description = Os05g0188700 protein, PFAM = PF08263;PF13855)' T '10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf05467_11122-14492' '(at2g42800 : 426.0) receptor like protein 29 (RLP29); LOCATED IN: anchored to membrane, plant-type cell wall; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G80080.1); Has 95156 Blast hits to 31366 proteins in 1102 species: Archae - 33; Bacteria - 5084; Metazoa - 23826; Fungi - 961; Plants - 59193; Viruses - 0; Other Eukaryotes - 6059 (source: NCBI BLink). & (p93194|rpk1_iponi : 109.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35693 : 101.0) no description available & (reliability: 852.0) & (original description: Putative RLP29, Description = At2g42800, PFAM = PF13855;PF13855)' T '10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf07563_258217-261494' '(at4g06744 : 377.0) Leucine-rich repeat (LRR) family protein; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G19320.1); Has 45026 Blast hits to 12967 proteins in 516 species: Archae - 11; Bacteria - 711; Metazoa - 1155; Fungi - 115; Plants - 40928; Viruses - 0; Other Eukaryotes - 2106 (source: NCBI BLink). & (p93194|rpk1_iponi : 92.8) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 754.0) & (original description: Putative At4g06744, Description = Uncharacterized protein At4g06744, PFAM = PF08263)' T '10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf10412_213058-216318' '(at2g15880 : 484.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G33970.1); Has 436796 Blast hits to 106000 proteins in 3186 species: Archae - 830; Bacteria - 85977; Metazoa - 139472; Fungi - 51372; Plants - 100247; Viruses - 9779; Other Eukaryotes - 49119 (source: NCBI BLink). & (p93194|rpk1_iponi : 113.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|37135 : 80.8) no description available & (reliability: 968.0) & (original description: Putative LRX4, Description = Leucine-rich repeat extensin-like protein 4, PFAM = PF13855;PF13855)' T '10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf14274_135357-138435' '(at4g29240 : 430.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT2G19780.1); Has 63461 Blast hits to 20951 proteins in 903 species: Archae - 14; Bacteria - 2781; Metazoa - 8815; Fungi - 480; Plants - 47912; Viruses - 34; Other Eukaryotes - 3425 (source: NCBI BLink). & (p93194|rpk1_iponi : 132.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 860.0) & (original description: Putative BnaC09g10090D, Description = BnaC09g10090D protein, PFAM = PF13855;PF08263)' T '10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf16542_140690-145041' '(at1g62440 : 454.0) encodes a paralog of LRX1 (LEUCINE-RICH REPEAT/EXTENSIN 1) which acts synergistically with LRX1 in root hair cell morphogenesis.; leucine-rich repeat/extensin 2 (LRX2); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: leucine-rich repeat/extensin 1 (TAIR:AT1G12040.1); Has 394418 Blast hits to 112735 proteins in 3055 species: Archae - 811; Bacteria - 65245; Metazoa - 131456; Fungi - 52175; Plants - 95400; Viruses - 7676; Other Eukaryotes - 41655 (source: NCBI BLink). & (p93194|rpk1_iponi : 111.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35528 : 92.8) no description available & (gnl|cdd|75061 : 84.3) no description available & (reliability: 908.0) & (original description: Putative LRX1, Description = Cell wall hydroxyproline-rich glycoprotein, PFAM = PF13855)' T '10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf18057_38150-41289' '(at4g28380 : 395.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G19020.1); Has 56971 Blast hits to 17893 proteins in 671 species: Archae - 10; Bacteria - 1073; Metazoa - 6575; Fungi - 300; Plants - 46284; Viruses - 0; Other Eukaryotes - 2729 (source: NCBI BLink). & (reliability: 790.0) & (original description: Putative BnaCnng78240D, Description = BnaCnng78240D protein, PFAM = PF13855)' T '10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf20135_48025-52430' '(at3g19020 : 417.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G49490.1); Has 706755 Blast hits to 161426 proteins in 4337 species: Archae - 1652; Bacteria - 156223; Metazoa - 226544; Fungi - 92124; Plants - 115331; Viruses - 14004; Other Eukaryotes - 100877 (source: NCBI BLink). & (p93194|rpk1_iponi : 119.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35528 : 101.0) no description available & (gnl|cdd|75061 : 89.3) no description available & (reliability: 834.0) & (original description: Putative LRX2, Description = Cell wall hydroxyproline-rich glycoprotein, PFAM = PF08263;PF13855)' T '10.5.3' 'cell wall.cell wall proteins.LRR' 'niben101scf21895_91688-94924' '(at4g06744 : 379.0) Leucine-rich repeat (LRR) family protein; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G19320.1); Has 45026 Blast hits to 12967 proteins in 516 species: Archae - 11; Bacteria - 711; Metazoa - 1155; Fungi - 115; Plants - 40928; Viruses - 0; Other Eukaryotes - 2106 (source: NCBI BLink). & (p93194|rpk1_iponi : 86.3) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 758.0) & (original description: Putative At4g06744, Description = Uncharacterized protein At4g06744, PFAM = )' T '10.5.4' 'cell wall.cell wall proteins.HRGP' 'nbv0.3scaffold15632_1-5358' '(at4g28300 : 253.0) Encodes a protein with 13.6% proline amino acids that is predicted to localize to the cell wall.; Protein of unknown function (DUF1421); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1421 (InterPro:IPR010820); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1421) (TAIR:AT5G14540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70679 : 84.9) no description available & (reliability: 506.0) & (original description: Putative PGSC0003DMG400018344, Description = Hydroxyproline-rich glycoprotein, PFAM = PF07223)' T '10.5.4' 'cell wall.cell wall proteins.HRGP' 'nbv0.3scaffold48156_598-6507' '(at3g22440 : 582.0) FRIGIDA-like protein; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT4G14900.1); Has 1385 Blast hits to 1327 proteins in 123 species: Archae - 0; Bacteria - 9; Metazoa - 139; Fungi - 70; Plants - 1142; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|71337 : 321.0) no description available & (reliability: 1164.0) & (original description: Putative FRL4A, Description = FRIGIDA-like protein 4a, PFAM = PF07899)' T '10.5.4' 'cell wall.cell wall proteins.HRGP' 'niben044scf00036599ctg002_18415-26030' '(at4g28300 : 247.0) Encodes a protein with 13.6% proline amino acids that is predicted to localize to the cell wall.; Protein of unknown function (DUF1421); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1421 (InterPro:IPR010820); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1421) (TAIR:AT5G14540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70679 : 96.4) no description available & (reliability: 494.0) & (original description: Putative PGSC0003DMG400018344, Description = Hydroxyproline-rich glycoprotein, PFAM = PF07223)' T '10.5.4' 'cell wall.cell wall proteins.HRGP' 'niben101scf00058_756099-763595' '(at3g22440 : 564.0) FRIGIDA-like protein; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT4G14900.1); Has 1385 Blast hits to 1327 proteins in 123 species: Archae - 0; Bacteria - 9; Metazoa - 139; Fungi - 70; Plants - 1142; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|71337 : 321.0) no description available & (reliability: 1128.0) & (original description: Putative FRL4A, Description = FRIGIDA-like protein 4a, PFAM = PF07899)' T '10.5.4' 'cell wall.cell wall proteins.HRGP' 'niben101scf03432_30007-38787' '(at3g22440 : 237.0) FRIGIDA-like protein; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT4G14900.1); Has 1385 Blast hits to 1327 proteins in 123 species: Archae - 0; Bacteria - 9; Metazoa - 139; Fungi - 70; Plants - 1142; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|71337 : 223.0) no description available & (reliability: 474.0) & (original description: Putative PGSC0003DMG400018590, Description = Os03g0794900 protein, PFAM = PF07899)' T '10.5.4' 'cell wall.cell wall proteins.HRGP' 'niben101scf06208_1-5541' '(at4g28300 : 283.0) Encodes a protein with 13.6% proline amino acids that is predicted to localize to the cell wall.; Protein of unknown function (DUF1421); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1421 (InterPro:IPR010820); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1421) (TAIR:AT5G14540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70679 : 88.3) no description available & (reliability: 566.0) & (original description: Putative PGSC0003DMG400018344, Description = Hydroxyproline-rich glycoprotein, PFAM = PF07223)' T '10.5.5' 'cell wall.cell wall proteins.RGP' 'nbv0.3scaffold56729_3264-7458' '(q8ru27|uptg2_soltu : 685.0) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) - Solanum tuberosum (Potato) & (at3g08900 : 672.0) Encodes a reversible autoglycosylated protein peripherally associated with cell membranes. Highly expressed in roots ans suspension-cultured cells.; reversibly glycosylated polypeptide 3 (RGP3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, glycogenin glucosyltransferase activity; INVOLVED IN: cellulose biosynthetic process, cellular cell wall organization; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, sepal, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 1 (TAIR:AT3G02230.1); Has 259 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72787 : 570.0) no description available & (reliability: 1344.0) & (original description: Putative UPTG, Description = Alpha-1,4-glucan-protein synthase [UDP-forming], PFAM = PF03214)' T '10.5.5' 'cell wall.cell wall proteins.RGP' 'niben044scf00020043ctg003_6074-9403' '(q9sc19|uptg1_soltu : 624.0) Alpha-1,4-glucan-protein synthase [UDP-forming] 1 (EC 2.4.1.112) (UDP-glucose:protein transglucosylase 1) (UPTG 1) - Solanum tuberosum (Potato) & (at3g08900 : 620.0) Encodes a reversible autoglycosylated protein peripherally associated with cell membranes. Highly expressed in roots ans suspension-cultured cells.; reversibly glycosylated polypeptide 3 (RGP3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, glycogenin glucosyltransferase activity; INVOLVED IN: cellulose biosynthetic process, cellular cell wall organization; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, sepal, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 1 (TAIR:AT3G02230.1); Has 259 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72787 : 540.0) no description available & (reliability: 1240.0) & (original description: Putative RGP, Description = Reversibly glycosylated polypeptide family, PFAM = PF03214)' T '10.5.5' 'cell wall.cell wall proteins.RGP' 'niben044scf00033013ctg002_3027-7424' '(q8ru27|uptg2_soltu : 686.0) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) - Solanum tuberosum (Potato) & (at3g08900 : 671.0) Encodes a reversible autoglycosylated protein peripherally associated with cell membranes. Highly expressed in roots ans suspension-cultured cells.; reversibly glycosylated polypeptide 3 (RGP3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, glycogenin glucosyltransferase activity; INVOLVED IN: cellulose biosynthetic process, cellular cell wall organization; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, sepal, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 1 (TAIR:AT3G02230.1); Has 259 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72787 : 570.0) no description available & (reliability: 1342.0) & (original description: Putative UPTG2, Description = Alpha-1,4-glucan-protein synthase [UDP-forming] 2, PFAM = PF03214)' T '10.5.5' 'cell wall.cell wall proteins.RGP' 'niben044scf00055939ctg003_3871-8615' '(gnl|cdd|72787 : 504.0) no description available & (at5g16510 : 489.0) Alpha-1,4-glucan-protein synthase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, glycogenin glucosyltransferase activity; INVOLVED IN: response to salt stress; LOCATED IN: cell junction, Golgi apparatus, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 1 (TAIR:AT3G02230.1); Has 238 Blast hits to 236 proteins in 43 species: Archae - 22; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (o04300|uptg_pea : 365.0) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC 2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG) (Reversibly glycosylated polypeptide) - Pisum sativum (Garden pea) & (reliability: 978.0) & (original description: Putative RGP5, Description = Probable UDP-arabinopyranose mutase 5, PFAM = PF03214)' T '10.5.5' 'cell wall.cell wall proteins.RGP' 'niben101scf00177_1188391-1195248' '(at5g16510 : 520.0) Alpha-1,4-glucan-protein synthase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, glycogenin glucosyltransferase activity; INVOLVED IN: response to salt stress; LOCATED IN: cell junction, Golgi apparatus, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 1 (TAIR:AT3G02230.1); Has 238 Blast hits to 236 proteins in 43 species: Archae - 22; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|72787 : 507.0) no description available & (o04300|uptg_pea : 375.0) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC 2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG) (Reversibly glycosylated polypeptide) - Pisum sativum (Garden pea) & (reliability: 1040.0) & (original description: Putative RGP5, Description = Probable UDP-arabinopyranose mutase 5, PFAM = PF03214)' T '10.5.5' 'cell wall.cell wall proteins.RGP' 'niben101scf00821_1-4395' '(q8ru27|uptg2_soltu : 710.0) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) - Solanum tuberosum (Potato) & (at3g02230 : 660.0) reversibly glycosylated polypeptide possibly involved in plant cell wall synthesis; reversibly glycosylated polypeptide 1 (RGP1); FUNCTIONS IN: cellulose synthase (UDP-forming) activity; INVOLVED IN: response to salt stress, plant-type cell wall biogenesis; LOCATED IN: cytosolic ribosome, Golgi stack, cell wall, plasma membrane, Golgi trans cisterna; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 2 (TAIR:AT5G15650.1); Has 260 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72787 : 565.0) no description available & (reliability: 1320.0) & (original description: Putative UPTG2, Description = Alpha-1,4-glucan-protein synthase [UDP-forming] 2, PFAM = PF03214)' T '10.5.5' 'cell wall.cell wall proteins.RGP' 'niben101scf01521_194016-198957' '(q8ru27|uptg2_soltu : 724.0) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) - Solanum tuberosum (Potato) & (at3g08900 : 669.0) Encodes a reversible autoglycosylated protein peripherally associated with cell membranes. Highly expressed in roots ans suspension-cultured cells.; reversibly glycosylated polypeptide 3 (RGP3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, glycogenin glucosyltransferase activity; INVOLVED IN: cellulose biosynthetic process, cellular cell wall organization; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, sepal, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 1 (TAIR:AT3G02230.1); Has 259 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72787 : 576.0) no description available & (reliability: 1338.0) & (original description: Putative UPTG2, Description = Alpha-1,4-glucan-protein synthase [UDP-forming] 2, PFAM = PF03214)' T '10.5.5' 'cell wall.cell wall proteins.RGP' 'niben101scf03056_27368-32426' '(q8ru27|uptg2_soltu : 687.0) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) - Solanum tuberosum (Potato) & (at3g08900 : 670.0) Encodes a reversible autoglycosylated protein peripherally associated with cell membranes. Highly expressed in roots ans suspension-cultured cells.; reversibly glycosylated polypeptide 3 (RGP3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, glycogenin glucosyltransferase activity; INVOLVED IN: cellulose biosynthetic process, cellular cell wall organization; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, sepal, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 1 (TAIR:AT3G02230.1); Has 259 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72787 : 571.0) no description available & (reliability: 1340.0) & (original description: Putative UAM3, Description = UDP-arabinopyranose mutase 3, PFAM = PF03214)' T '10.5.5' 'cell wall.cell wall proteins.RGP' 'niben101scf05414_24592-29096' '(q9sc19|uptg1_soltu : 719.0) Alpha-1,4-glucan-protein synthase [UDP-forming] 1 (EC 2.4.1.112) (UDP-glucose:protein transglucosylase 1) (UPTG 1) - Solanum tuberosum (Potato) & (at3g02230 : 671.0) reversibly glycosylated polypeptide possibly involved in plant cell wall synthesis; reversibly glycosylated polypeptide 1 (RGP1); FUNCTIONS IN: cellulose synthase (UDP-forming) activity; INVOLVED IN: response to salt stress, plant-type cell wall biogenesis; LOCATED IN: cytosolic ribosome, Golgi stack, cell wall, plasma membrane, Golgi trans cisterna; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 2 (TAIR:AT5G15650.1); Has 260 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72787 : 575.0) no description available & (reliability: 1342.0) & (original description: Putative UPTG1, Description = Alpha-1,4-glucan-protein synthase [UDP-forming] 1, PFAM = PF03214)' T '10.5.5' 'cell wall.cell wall proteins.RGP' 'niben101scf05618_417099-421327' '(q9sc19|uptg1_soltu : 670.0) Alpha-1,4-glucan-protein synthase [UDP-forming] 1 (EC 2.4.1.112) (UDP-glucose:protein transglucosylase 1) (UPTG 1) - Solanum tuberosum (Potato) & (at3g08900 : 657.0) Encodes a reversible autoglycosylated protein peripherally associated with cell membranes. Highly expressed in roots ans suspension-cultured cells.; reversibly glycosylated polypeptide 3 (RGP3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, glycogenin glucosyltransferase activity; INVOLVED IN: cellulose biosynthetic process, cellular cell wall organization; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, sepal, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 1 (TAIR:AT3G02230.1); Has 259 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72787 : 564.0) no description available & (reliability: 1314.0) & (original description: Putative RGP4, Description = Probable UDP-arabinopyranose mutase 4, PFAM = PF03214)' T '10.5.5' 'cell wall.cell wall proteins.RGP' 'niben101scf05620_182219-186910' '(q8ru27|uptg2_soltu : 731.0) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) - Solanum tuberosum (Potato) & (at3g02230 : 671.0) reversibly glycosylated polypeptide possibly involved in plant cell wall synthesis; reversibly glycosylated polypeptide 1 (RGP1); FUNCTIONS IN: cellulose synthase (UDP-forming) activity; INVOLVED IN: response to salt stress, plant-type cell wall biogenesis; LOCATED IN: cytosolic ribosome, Golgi stack, cell wall, plasma membrane, Golgi trans cisterna; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 2 (TAIR:AT5G15650.1); Has 260 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72787 : 579.0) no description available & (reliability: 1342.0) & (original description: Putative UPTG2, Description = Alpha-1,4-glucan-protein synthase [UDP-forming] 2, PFAM = PF03214)' T '10.5.5' 'cell wall.cell wall proteins.RGP' 'niben101scf05620_182234-186652' '(q8ru27|uptg2_soltu : 724.0) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) - Solanum tuberosum (Potato) & (at3g02230 : 668.0) reversibly glycosylated polypeptide possibly involved in plant cell wall synthesis; reversibly glycosylated polypeptide 1 (RGP1); FUNCTIONS IN: cellulose synthase (UDP-forming) activity; INVOLVED IN: response to salt stress, plant-type cell wall biogenesis; LOCATED IN: cytosolic ribosome, Golgi stack, cell wall, plasma membrane, Golgi trans cisterna; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 2 (TAIR:AT5G15650.1); Has 260 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72787 : 578.0) no description available & (reliability: 1336.0) & (original description: Putative UPTG2, Description = Alpha-1,4-glucan-protein synthase [UDP-forming] 2, PFAM = PF03214)' T '10.5.5' 'cell wall.cell wall proteins.RGP' 'niben101scf06825_423139-426472' '(q9sc19|uptg1_soltu : 625.0) Alpha-1,4-glucan-protein synthase [UDP-forming] 1 (EC 2.4.1.112) (UDP-glucose:protein transglucosylase 1) (UPTG 1) - Solanum tuberosum (Potato) & (at3g08900 : 621.0) Encodes a reversible autoglycosylated protein peripherally associated with cell membranes. Highly expressed in roots ans suspension-cultured cells.; reversibly glycosylated polypeptide 3 (RGP3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, glycogenin glucosyltransferase activity; INVOLVED IN: cellulose biosynthetic process, cellular cell wall organization; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, sepal, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 1 (TAIR:AT3G02230.1); Has 259 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72787 : 541.0) no description available & (reliability: 1242.0) & (original description: Putative UAM2, Description = Probable UDP-arabinopyranose mutase 2, PFAM = PF03214)' T '10.5.5' 'cell wall.cell wall proteins.RGP' 'niben101scf14390_25941-31656' '(q8ru27|uptg2_soltu : 671.0) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) - Solanum tuberosum (Potato) & (at3g08900 : 653.0) Encodes a reversible autoglycosylated protein peripherally associated with cell membranes. Highly expressed in roots ans suspension-cultured cells.; reversibly glycosylated polypeptide 3 (RGP3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, glycogenin glucosyltransferase activity; INVOLVED IN: cellulose biosynthetic process, cellular cell wall organization; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, sepal, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 1 (TAIR:AT3G02230.1); Has 259 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72787 : 562.0) no description available & (reliability: 1306.0) & (original description: Putative UPTG2, Description = Alpha-1,4-glucan-protein synthase [UDP-forming] 2, PFAM = PF03214)' T '10.5.5' 'cell wall.cell wall proteins.RGP' 'niben101scf17815_36368-40788' '(q8ru27|uptg2_soltu : 734.0) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) - Solanum tuberosum (Potato) & (at3g08900 : 666.0) Encodes a reversible autoglycosylated protein peripherally associated with cell membranes. Highly expressed in roots ans suspension-cultured cells.; reversibly glycosylated polypeptide 3 (RGP3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, glycogenin glucosyltransferase activity; INVOLVED IN: cellulose biosynthetic process, cellular cell wall organization; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, sepal, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 1 (TAIR:AT3G02230.1); Has 259 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72787 : 578.0) no description available & (reliability: 1332.0) & (original description: Putative UPTG2, Description = Alpha-1,4-glucan-protein synthase [UDP-forming] 2, PFAM = PF03214)' T '10.6' 'cell wall.degradation' 'nbv0.3scaffold24408_12992-19421' '(at5g34940 : 671.0) The protein is predicted (WoLF PSORT program) to be membrane-associated.; glucuronidase 3 (GUS3); FUNCTIONS IN: beta-glucuronidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 79, N-terminal (InterPro:IPR005199); BEST Arabidopsis thaliana protein match is: glucuronidase 2 (TAIR:AT5G07830.1); Has 340 Blast hits to 334 proteins in 62 species: Archae - 0; Bacteria - 20; Metazoa - 169; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|67288 : 380.0) no description available & (reliability: 1342.0) & (original description: Putative BnaC07g31120D, Description = BnaC07g31120D protein, PFAM = PF03662)' T '10.6' 'cell wall.degradation' 'nbv0.5scaffold2575_173340-179563' '(at5g34940 : 558.0) The protein is predicted (WoLF PSORT program) to be membrane-associated.; glucuronidase 3 (GUS3); FUNCTIONS IN: beta-glucuronidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 79, N-terminal (InterPro:IPR005199); BEST Arabidopsis thaliana protein match is: glucuronidase 2 (TAIR:AT5G07830.1); Has 340 Blast hits to 334 proteins in 62 species: Archae - 0; Bacteria - 20; Metazoa - 169; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|67288 : 381.0) no description available & (reliability: 1116.0) & (original description: Putative BnaA10g23380D, Description = BnaA10g23380D protein, PFAM = PF03662)' T '10.6' 'cell wall.degradation' 'niben044scf00002908ctg002_4799-7104' '(at5g62150 : 108.0) peptidoglycan-binding LysM domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: peptidoglycan-binding LysM domain-containing protein (TAIR:AT4G25433.1); Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative PGSC0003DMG400014303, Description = Peptidoglycan-binding LysM domain protein, PFAM = PF01476)' T '10.6' 'cell wall.degradation' 'niben044scf00026934ctg003_3702-9936' '(at5g34940 : 674.0) The protein is predicted (WoLF PSORT program) to be membrane-associated.; glucuronidase 3 (GUS3); FUNCTIONS IN: beta-glucuronidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 79, N-terminal (InterPro:IPR005199); BEST Arabidopsis thaliana protein match is: glucuronidase 2 (TAIR:AT5G07830.1); Has 340 Blast hits to 334 proteins in 62 species: Archae - 0; Bacteria - 20; Metazoa - 169; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|67288 : 402.0) no description available & (reliability: 1348.0) & (original description: Putative At5g34940, Description = Heparanase-like protein 3, PFAM = PF03662)' T '10.6' 'cell wall.degradation' 'niben101scf00282_27988-30293' '(at5g62150 : 108.0) peptidoglycan-binding LysM domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: peptidoglycan-binding LysM domain-containing protein (TAIR:AT4G25433.1); Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative PGSC0003DMG400014303, Description = Peptidoglycan-binding LysM domain protein, PFAM = PF01476)' T '10.6' 'cell wall.degradation' 'niben101scf00906_118543-120863' '(at3g52790 : 110.0) peptidoglycan-binding LysM domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392); BEST Arabidopsis thaliana protein match is: peptidoglycan-binding LysM domain-containing protein (TAIR:AT4G25433.1); Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative Ccrd_007644, Description = Peptidoglycan-binding lysin domain-containing protein, PFAM = PF01476)' T '10.6' 'cell wall.degradation' 'niben101scf02085_1839774-1845997' '(at5g34940 : 579.0) The protein is predicted (WoLF PSORT program) to be membrane-associated.; glucuronidase 3 (GUS3); FUNCTIONS IN: beta-glucuronidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 79, N-terminal (InterPro:IPR005199); BEST Arabidopsis thaliana protein match is: glucuronidase 2 (TAIR:AT5G07830.1); Has 340 Blast hits to 334 proteins in 62 species: Archae - 0; Bacteria - 20; Metazoa - 169; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|67288 : 378.0) no description available & (reliability: 1158.0) & (original description: Putative At5g34940, Description = Heparanase-like protein 3, PFAM = PF03662)' T '10.6' 'cell wall.degradation' 'niben101scf05552_1016299-1018661' '(at5g62150 : 108.0) peptidoglycan-binding LysM domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: peptidoglycan-binding LysM domain-containing protein (TAIR:AT4G25433.1); Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative At4g25433, Description = At4g25433, PFAM = PF01476)' T '10.6' 'cell wall.degradation' 'niben101scf16691_10553-19579' '(at5g34940 : 673.0) The protein is predicted (WoLF PSORT program) to be membrane-associated.; glucuronidase 3 (GUS3); FUNCTIONS IN: beta-glucuronidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 79, N-terminal (InterPro:IPR005199); BEST Arabidopsis thaliana protein match is: glucuronidase 2 (TAIR:AT5G07830.1); Has 340 Blast hits to 334 proteins in 62 species: Archae - 0; Bacteria - 20; Metazoa - 169; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|67288 : 400.0) no description available & (reliability: 1346.0) & (original description: Putative At5g34940, Description = Heparanase-like protein 3, PFAM = PF03662)' T '10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'nbv0.3scaffold17380_16517-23126' '(at2g32990 : 665.0) glycosyl hydrolase 9B8 (GH9B8); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C2 (TAIR:AT1G64390.1); Has 1753 Blast hits to 1740 proteins in 252 species: Archae - 2; Bacteria - 582; Metazoa - 189; Fungi - 17; Plants - 922; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (q6z5p2|gun7_orysa : 615.0) Endoglucanase 7 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 7) (OsGLU10) - Oryza sativa (Rice) & (gnl|cdd|85009 : 551.0) no description available & (reliability: 1330.0) & (original description: Putative cel8, Description = Endoglucanase, PFAM = PF00759)' T '10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'nbv0.3scaffold52188_2552-10547' '(at5g20950 : 959.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 254.0) no description available & (reliability: 1918.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF01915;PF00933)' T '10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'nbv0.5scaffold722_284789-291398' '(at2g32990 : 666.0) glycosyl hydrolase 9B8 (GH9B8); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C2 (TAIR:AT1G64390.1); Has 1753 Blast hits to 1740 proteins in 252 species: Archae - 2; Bacteria - 582; Metazoa - 189; Fungi - 17; Plants - 922; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (q6z5p2|gun7_orysa : 610.0) Endoglucanase 7 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 7) (OsGLU10) - Oryza sativa (Rice) & (gnl|cdd|85009 : 556.0) no description available & (reliability: 1332.0) & (original description: Putative cel8, Description = Endoglucanase, PFAM = PF00759)' T '10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'nbv0.5scaffold3026_264519-270870' '(at5g04885 : 865.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20950.2); Has 9897 Blast hits to 9186 proteins in 1453 species: Archae - 69; Bacteria - 6037; Metazoa - 14; Fungi - 1479; Plants - 480; Viruses - 0; Other Eukaryotes - 1818 (source: NCBI BLink). & (gnl|cdd|31661 : 253.0) no description available & (reliability: 1706.0) & (original description: Putative exg1, Description = Exoglucanase, PFAM = PF01915;PF00933)' T '10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'nbv0.5scaffold3532_186817-190661' '(at3g43860 : 543.0) glycosyl hydrolase 9A4 (GH9A4); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B13 (TAIR:AT4G02290.1); Has 1796 Blast hits to 1785 proteins in 262 species: Archae - 2; Bacteria - 633; Metazoa - 188; Fungi - 19; Plants - 915; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (q6k7g9|gun8_orysa : 501.0) Endoglucanase 8 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 8) - Oryza sativa (Rice) & (gnl|cdd|85009 : 378.0) no description available & (reliability: 1086.0) & (original description: Putative GH9B4, Description = Endo-1,4-beta-glucanase, PFAM = PF00759)' T '10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben044scf00011140ctg006_11842-18139' '(at5g20950 : 958.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 263.0) no description available & (reliability: 1916.0) & (original description: Putative exg1, Description = Exoglucanase, PFAM = PF00933;PF01915)' T '10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben044scf00024745ctg007_8005-13474' '(at5g04885 : 860.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20950.2); Has 9897 Blast hits to 9186 proteins in 1453 species: Archae - 69; Bacteria - 6037; Metazoa - 14; Fungi - 1479; Plants - 480; Viruses - 0; Other Eukaryotes - 1818 (source: NCBI BLink). & (gnl|cdd|31661 : 251.0) no description available & (reliability: 1558.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF01915;PF00933)' T '10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben044scf00029313ctg001_1-7253' '(p22503|gun_phavu : 622.0) Endoglucanase precursor (EC 3.2.1.4) (Endo-1,4-beta-glucanase) (Abscission cellulase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g09740 : 600.0) glycosyl hydrolase 9B14 (GH9B14); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B15 (TAIR:AT4G23560.1); Has 1884 Blast hits to 1872 proteins in 267 species: Archae - 2; Bacteria - 724; Metazoa - 173; Fungi - 19; Plants - 922; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|85009 : 529.0) no description available & (reliability: 1200.0) & (original description: Putative cel1, Description = Endoglucanase, PFAM = PF00759)' T '10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben044scf00048725ctg005_10902-13436' '(at3g47000 : 286.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 3, active site (InterPro:IPR019800); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT3G47010.1); Has 10697 Blast hits to 9860 proteins in 1558 species: Archae - 69; Bacteria - 6575; Metazoa - 14; Fungi - 1579; Plants - 487; Viruses - 0; Other Eukaryotes - 1973 (source: NCBI BLink). & (gnl|cdd|85764 : 151.0) no description available & (reliability: 572.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF01915)' T '10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf00023_489554-495401' '(at2g32990 : 666.0) glycosyl hydrolase 9B8 (GH9B8); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C2 (TAIR:AT1G64390.1); Has 1753 Blast hits to 1740 proteins in 252 species: Archae - 2; Bacteria - 582; Metazoa - 189; Fungi - 17; Plants - 922; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (q6z5p2|gun7_orysa : 605.0) Endoglucanase 7 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 7) (OsGLU10) - Oryza sativa (Rice) & (gnl|cdd|85009 : 548.0) no description available & (reliability: 1332.0) & (original description: Putative cel8, Description = Endoglucanase, PFAM = PF00759)' T '10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf00261_66767-70670' '(at3g43860 : 548.0) glycosyl hydrolase 9A4 (GH9A4); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B13 (TAIR:AT4G02290.1); Has 1796 Blast hits to 1785 proteins in 262 species: Archae - 2; Bacteria - 633; Metazoa - 188; Fungi - 19; Plants - 915; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (q6k7g9|gun8_orysa : 499.0) Endoglucanase 8 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 8) - Oryza sativa (Rice) & (gnl|cdd|85009 : 385.0) no description available & (reliability: 1096.0) & (original description: Putative cel1, Description = Endoglucanase, PFAM = PF00759)' T '10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf00286_568477-576548' '(at5g20950 : 621.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 160.0) no description available & (reliability: 1242.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF00933;PF01915)' T '10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf00856_114462-128637' '(at5g04885 : 956.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20950.2); Has 9897 Blast hits to 9186 proteins in 1453 species: Archae - 69; Bacteria - 6037; Metazoa - 14; Fungi - 1479; Plants - 480; Viruses - 0; Other Eukaryotes - 1818 (source: NCBI BLink). & (gnl|cdd|31661 : 249.0) no description available & (reliability: 1740.0) & (original description: Putative exg1, Description = Exoglucanase, PFAM = PF00933;PF01915)' T '10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf01184_1647446-1652520' '(at1g71380 : 662.0) cellulase 3 (CEL3); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plasma membrane, plant-type cell wall; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: cellulase 5 (TAIR:AT1G22880.1); Has 1752 Blast hits to 1741 proteins in 250 species: Archae - 2; Bacteria - 607; Metazoa - 172; Fungi - 17; Plants - 917; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|85009 : 568.0) no description available & (q7xth4|gun11_orysa : 559.0) Endoglucanase 11 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 11) (OsGLU4) - Oryza sativa (Rice) & (reliability: 1296.0) & (original description: Putative cel7, Description = Endoglucanase, PFAM = PF00759)' T '10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf01418_216370-220380' '(at3g43860 : 664.0) glycosyl hydrolase 9A4 (GH9A4); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B13 (TAIR:AT4G02290.1); Has 1796 Blast hits to 1785 proteins in 262 species: Archae - 2; Bacteria - 633; Metazoa - 188; Fungi - 19; Plants - 915; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (q6k7g9|gun8_orysa : 613.0) Endoglucanase 8 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 8) - Oryza sativa (Rice) & (gnl|cdd|85009 : 485.0) no description available & (reliability: 1328.0) & (original description: Putative cel1, Description = Endoglucanase, PFAM = PF00759)' T '10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf02250_26307-33032' '(at3g47000 : 902.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 3, active site (InterPro:IPR019800); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT3G47010.1); Has 10697 Blast hits to 9860 proteins in 1558 species: Archae - 69; Bacteria - 6575; Metazoa - 14; Fungi - 1579; Plants - 487; Viruses - 0; Other Eukaryotes - 1973 (source: NCBI BLink). & (gnl|cdd|31661 : 268.0) no description available & (reliability: 1804.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF00933;PF01915)' T '10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf05588_640668-647428' '(at5g20950 : 989.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 254.0) no description available & (reliability: 1978.0) & (original description: Putative BGL, Description = Beta-glucosidase, PFAM = PF00933;PF01915)' T '10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf05588_826642-833218' '(at5g20950 : 951.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 246.0) no description available & (reliability: 1902.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF01915;PF00933)' T '10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf06189_254527-261986' '(at3g47000 : 905.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 3, active site (InterPro:IPR019800); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT3G47010.1); Has 10697 Blast hits to 9860 proteins in 1558 species: Archae - 69; Bacteria - 6575; Metazoa - 14; Fungi - 1579; Plants - 487; Viruses - 0; Other Eukaryotes - 1973 (source: NCBI BLink). & (gnl|cdd|31661 : 267.0) no description available & (reliability: 1810.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF00933;PF01915)' T '10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf06267_302543-307717' '(q69sg5|gun24_orysa : 627.0) Endoglucanase 24 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 24) - Oryza sativa (Rice) & (at1g19940 : 606.0) glycosyl hydrolase 9B5 (GH9B5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B7 (TAIR:AT1G75680.1); Has 1847 Blast hits to 1835 proteins in 264 species: Archae - 2; Bacteria - 685; Metazoa - 182; Fungi - 17; Plants - 919; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|85009 : 466.0) no description available & (reliability: 1212.0) & (original description: Putative cel8, Description = Endoglucanase, PFAM = PF00759)' T '10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf06775_69948-79469' '(at5g20950 : 902.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 253.0) no description available & (reliability: 1804.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF00933;PF01915)' T '10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf07470_49965-58962' '(at3g47000 : 903.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 3, active site (InterPro:IPR019800); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT3G47010.1); Has 10697 Blast hits to 9860 proteins in 1558 species: Archae - 69; Bacteria - 6575; Metazoa - 14; Fungi - 1579; Plants - 487; Viruses - 0; Other Eukaryotes - 1973 (source: NCBI BLink). & (gnl|cdd|31661 : 275.0) no description available & (reliability: 1806.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF00933;PF01915)' T '10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf08133_2624-9724' '(at2g32990 : 775.0) glycosyl hydrolase 9B8 (GH9B8); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C2 (TAIR:AT1G64390.1); Has 1753 Blast hits to 1740 proteins in 252 species: Archae - 2; Bacteria - 582; Metazoa - 189; Fungi - 17; Plants - 922; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (q6z5p2|gun7_orysa : 691.0) Endoglucanase 7 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 7) (OsGLU10) - Oryza sativa (Rice) & (gnl|cdd|85009 : 562.0) no description available & (reliability: 1550.0) & (original description: Putative cel8, Description = Endoglucanase, PFAM = PF00759)' T '10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf08411_142941-152015' '(p22503|gun_phavu : 635.0) Endoglucanase precursor (EC 3.2.1.4) (Endo-1,4-beta-glucanase) (Abscission cellulase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g09740 : 611.0) glycosyl hydrolase 9B14 (GH9B14); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B15 (TAIR:AT4G23560.1); Has 1884 Blast hits to 1872 proteins in 267 species: Archae - 2; Bacteria - 724; Metazoa - 173; Fungi - 19; Plants - 922; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|85009 : 543.0) no description available & (reliability: 1222.0) & (original description: Putative cel1, Description = Endoglucanase, PFAM = PF00759)' T '10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf09698_79828-91472' '(at5g20950 : 887.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 253.0) no description available & (reliability: 1774.0) & (original description: Putative BG, Description = Endo-alpha-1,4-glucanase, PFAM = PF01915;PF00933)' T '10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf11743_67294-74707' '(at1g19940 : 678.0) glycosyl hydrolase 9B5 (GH9B5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B7 (TAIR:AT1G75680.1); Has 1847 Blast hits to 1835 proteins in 264 species: Archae - 2; Bacteria - 685; Metazoa - 182; Fungi - 17; Plants - 919; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (q69sg5|gun24_orysa : 670.0) Endoglucanase 24 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 24) - Oryza sativa (Rice) & (gnl|cdd|85009 : 464.0) no description available & (reliability: 1356.0) & (original description: Putative cel8, Description = Endoglucanase, PFAM = PF00759)' T '10.6.1' 'cell wall.degradation.cellulases and beta -1,4-glucanases' 'niben101scf13289_312750-319422' '(at5g20950 : 961.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 261.0) no description available & (reliability: 1922.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF00933;PF01915)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.3scaffold26285_431-4435' '(at5g57550 : 373.0) xyloglucan endotransglycosylase-related protein (XTR3); xyloglucan endotransglucosylase/hydrolase 25 (XTH25); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35694|bru1_soybn : 356.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 331.0) no description available & (reliability: 724.0) & (original description: Putative XTH16, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 16, PFAM = PF00722;PF06955)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.3scaffold31079_3060-11616' '(p48981|bgal_maldo : 1108.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) - Malus domestica (Apple) (Malus sylvestris) & (at3g13750 : 1076.0) beta-galactosidase, glycosyl hydrolase family 35; beta galactosidase 1 (BGAL1); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2213 Blast hits to 2119 proteins in 468 species: Archae - 15; Bacteria - 882; Metazoa - 391; Fungi - 211; Plants - 629; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|35717 : 828.0) no description available & (gnl|cdd|85374 : 432.0) no description available & (reliability: 2110.0) & (original description: Putative bGal, Description = Beta-galactosidase, PFAM = PF01301)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.3scaffold42617_5200-9426' '(at5g57550 : 391.0) xyloglucan endotransglycosylase-related protein (XTR3); xyloglucan endotransglucosylase/hydrolase 25 (XTH25); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35694|bru1_soybn : 369.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 327.0) no description available & (reliability: 734.0) & (original description: Putative XTH23, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 23, PFAM = PF00722;PF06955)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.3scaffold46605_9016-14661' '(at4g33840 : 537.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 188.0) no description available & (reliability: 1074.0) & (original description: Putative xyn3, Description = Glycosyl hydrolase family 10 protein, PFAM = PF00331)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.3scaffold96773_1-4449' '(at5g66460 : 361.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 100.0) no description available & (reliability: 722.0) & (original description: Putative MAN7, Description = Mannan endo-1,4-beta-mannosidase, PFAM = PF00150)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.3scaffold102365_218-3490' '(at4g25810 : 395.0) xyloglucan endotransglycosylase-related protein (XTR6); xyloglucan endotransglycosylase 6 (XTR6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein (TAIR:AT5G57560.1); Has 2255 Blast hits to 2235 proteins in 316 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 455; Plants - 1384; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (p35694|bru1_soybn : 389.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 335.0) no description available & (reliability: 770.0) & (original description: Putative xth2, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.5scaffold468_503812-511381' '(at5g10560 : 965.0) Glycosyl hydrolase family protein; FUNCTIONS IN: xylan 1,4-beta-xylosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT1G78060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p83344|xynb_prupe : 358.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (gnl|cdd|85134 : 184.0) no description available & (reliability: 1930.0) & (original description: Putative BXL6, Description = Probable beta-D-xylosidase 6, PFAM = PF00933;PF14310;PF01915)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.5scaffold1091_98688-103898' '(at5g66460 : 436.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 102.0) no description available & (reliability: 872.0) & (original description: Putative MAN2, Description = Mannan endo-1,4-beta-mannosidase 2, PFAM = PF00150)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.5scaffold1463_152915-448225' '(q7y1x1|est_hevbr : 88.2) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (at5g14450 : 87.8) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G26430.1); Has 3217 Blast hits to 3179 proteins in 111 species: Archae - 0; Bacteria - 82; Metazoa - 0; Fungi - 14; Plants - 3119; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative At3g27950, Description = GDSL esterase/lipase, PFAM = )' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.5scaffold1795_62321-65641' '(at5g49360 : 189.0) Encodes a bifunctional {beta}-D-xylosidase/{alpha}-L-arabinofuranosidase required for pectic arabinan modification. Located in the extracellular matrix. Gene is expressed specifically in tissues undergoing secondary wall thickening. This is a member of glycosyl hydrolase family 3 and has six other closely related members.; beta-xylosidase 1 (BXL1); FUNCTIONS IN: alpha-N-arabinofuranosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: seed coat development; LOCATED IN: apoplast, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: beta-xylosidase 2 (TAIR:AT1G02640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative ARF, Description = Putative beta-D-xylosidase 2, PFAM = )' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.5scaffold2376_1-4602' '(at5g66460 : 280.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative manA, Description = Mannan endo-1,4-beta-mannosidase-like protein, PFAM = PF00150)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.5scaffold2445_202268-213261' '(at4g33840 : 502.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 192.0) no description available & (reliability: 1004.0) & (original description: Putative PGSC0003DMG400014606, Description = Glycosyl hydrolase family 10 protein, PFAM = PF00331)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.5scaffold3592_1250-4896' '(p35694|bru1_soybn : 396.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (at4g25810 : 394.0) xyloglucan endotransglycosylase-related protein (XTR6); xyloglucan endotransglycosylase 6 (XTR6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein (TAIR:AT5G57560.1); Has 2255 Blast hits to 2235 proteins in 316 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 455; Plants - 1384; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (gnl|cdd|29536 : 339.0) no description available & (reliability: 776.0) & (original description: Putative XTH23, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 23, PFAM = PF00722;PF06955)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'nbv0.5scaffold5939_97662-107006' '(at4g33840 : 559.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 192.0) no description available & (reliability: 1118.0) & (original description: Putative At4g33840, Description = At4g33840/F17I5_30, PFAM = PF02018;PF00331)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben044scf00000286ctg009_1391-8886' '(at4g33840 : 497.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 192.0) no description available & (reliability: 994.0) & (original description: Putative BnaA03g50660D, Description = BnaA03g50660D protein, PFAM = PF00331;PF02018)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben044scf00001387ctg010_1-1830' '(at1g02640 : 276.0) encodes a protein similar to a beta-xylosidase located in the extracellular matrix. This is a member of glycosyl hydrolase family 3 and has six other closely related members.; beta-xylosidase 2 (BXL2); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: beta-xylosidase 1 (TAIR:AT5G49360.1); Has 9578 Blast hits to 8300 proteins in 1224 species: Archae - 65; Bacteria - 5802; Metazoa - 17; Fungi - 1614; Plants - 527; Viruses - 0; Other Eukaryotes - 1553 (source: NCBI BLink). & (p83344|xynb_prupe : 237.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (reliability: 552.0) & (original description: Putative ARF, Description = Putative beta-D-xylosidase 2, PFAM = PF14310)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben044scf00001654ctg000_11897-16773' '(at5g66460 : 249.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 84.3) no description available & (reliability: 498.0) & (original description: Putative MAN6, Description = Endo-beta-1,4-mannanase, PFAM = PF00150)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben044scf00005165ctg006_1-9379' '(at1g58370 : 1243.0) Encodes a protein with xylanase activity.; RXF12; FUNCTIONS IN: endo-1,4-beta-xylanase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein (TAIR:AT1G10050.1); Has 2572 Blast hits to 2336 proteins in 449 species: Archae - 10; Bacteria - 1384; Metazoa - 31; Fungi - 355; Plants - 353; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink). & (gnl|cdd|84699 : 234.0) no description available & (reliability: 2486.0) & (original description: Putative xynZ, Description = Beta-xylanase, PFAM = PF02018;PF02018;PF02018;PF00331)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben044scf00008871ctg006_1-2003' '(at4g25810 : 396.0) xyloglucan endotransglycosylase-related protein (XTR6); xyloglucan endotransglycosylase 6 (XTR6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein (TAIR:AT5G57560.1); Has 2255 Blast hits to 2235 proteins in 316 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 455; Plants - 1384; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (p35694|bru1_soybn : 395.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 339.0) no description available & (reliability: 778.0) & (original description: Putative XTH23, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 23, PFAM = PF06955;PF00722)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben044scf00015861ctg003_14985-21545' '(at5g66460 : 417.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 108.0) no description available & (reliability: 834.0) & (original description: Putative manA, Description = Mannan endo-1,4-beta-mannosidase-like protein, PFAM = PF00150)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben044scf00025658ctg006_2473-6421' '(at5g01930 : 646.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT5G66460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 115.0) no description available & (reliability: 1292.0) & (original description: Putative MAN6, Description = Mannan endo-1,4-beta-mannosidase 6, PFAM = PF00150)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben044scf00033056ctg000_1-4190' '(at5g66460 : 437.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 106.0) no description available & (reliability: 874.0) & (original description: Putative manA, Description = (1-4)-beta-mannan endohydrolase, PFAM = PF00150)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben044scf00035404ctg000_2978-7946' '(at4g33840 : 575.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 192.0) no description available & (reliability: 1150.0) & (original description: Putative At4g33840, Description = At4g33840/F17I5_30, PFAM = PF02018;PF00331)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben044scf00039533ctg003_10307-20286' '(at1g78060 : 1027.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: apoplast, cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G10560.1); Has 9183 Blast hits to 7917 proteins in 1177 species: Archae - 63; Bacteria - 5533; Metazoa - 16; Fungi - 1604; Plants - 525; Viruses - 0; Other Eukaryotes - 1442 (source: NCBI BLink). & (p83344|xynb_prupe : 365.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (gnl|cdd|85764 : 203.0) no description available & (reliability: 2054.0) & (original description: Putative BXL7, Description = Probable beta-D-xylosidase 7, PFAM = PF14310;PF01915;PF00933)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben044scf00044931ctg006_1-2653' '(at3g23730 : 348.0) xyloglucan endotransglucosylase/hydrolase 16 (XTH16); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 15 (TAIR:AT4G14130.1); Has 2187 Blast hits to 2165 proteins in 308 species: Archae - 0; Bacteria - 273; Metazoa - 0; Fungi - 414; Plants - 1389; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|29536 : 327.0) no description available & (p35694|bru1_soybn : 321.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (reliability: 634.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben044scf00048158ctg007_1-3311' '(at5g57550 : 351.0) xyloglucan endotransglycosylase-related protein (XTR3); xyloglucan endotransglucosylase/hydrolase 25 (XTH25); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35694|bru1_soybn : 330.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 327.0) no description available & (reliability: 652.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben044scf00057082ctg004_2992-8490' '(at3g10740 : 488.0) Encodes a bifunctional alpha-l-arabinofuranosidase/beta-d-xylosidase that belongs to family 51 of glycoside hydrolases. It may be involved in cell wall modification.; alpha-L-arabinofuranosidase 1 (ASD1); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xylan 1,4-beta-xylosidase activity, alpha-N-arabinofuranosidase activity; INVOLVED IN: xylan catabolic process; LOCATED IN: apoplast, vacuole, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-L-arabinofuranosidase, C-terminal (InterPro:IPR010720), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: alpha-L-arabinofuranosidase 2 (TAIR:AT5G26120.1); Has 1627 Blast hits to 1611 proteins in 407 species: Archae - 8; Bacteria - 1238; Metazoa - 0; Fungi - 173; Plants - 169; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|87190 : 106.0) no description available & (reliability: 976.0) & (original description: Putative Sb01g036960, Description = Putative uncharacterized protein Sb01g036960, PFAM = PF06964)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101ctg13782_1-2126' '(at4g25810 : 394.0) xyloglucan endotransglycosylase-related protein (XTR6); xyloglucan endotransglycosylase 6 (XTR6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein (TAIR:AT5G57560.1); Has 2255 Blast hits to 2235 proteins in 316 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 455; Plants - 1384; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (p35694|bru1_soybn : 388.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 333.0) no description available & (reliability: 768.0) & (original description: Putative XTH23, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 23, PFAM = PF06955;PF00722)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf00069_925002-984804' '(at5g10560 : 953.0) Glycosyl hydrolase family protein; FUNCTIONS IN: xylan 1,4-beta-xylosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT1G78060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p83344|xynb_prupe : 351.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (gnl|cdd|85134 : 188.0) no description available & (reliability: 1906.0) & (original description: Putative Sb06g023450, Description = Putative uncharacterized protein Sb06g023450, PFAM = PF00933;PF01915;PF14310)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf00113_408874-419694' '(at4g33830 : 454.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Galactose-binding domain-like (InterPro:IPR008979), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47910 : 178.0) no description available & (reliability: 908.0) & (original description: Putative Sb01g043720, Description = Putative uncharacterized protein Sb01g043720, PFAM = PF00331;PF02018)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf00279_109349-116989' '(at5g64570 : 1155.0) Encodes a beta-d-xylosidase that belongs to family 3 of glycoside hydrolases.; beta-D-xylosidase 4 (XYL4); FUNCTIONS IN: xylan 1,4-beta-xylosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: xylan catabolic process; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: beta-xylosidase 3 (TAIR:AT5G09730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p83344|xynb_prupe : 471.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (gnl|cdd|31661 : 200.0) no description available & (reliability: 2310.0) & (original description: Putative Xyl2, Description = Beta-xylosidase/alpha-L-arabinofuranosidase 2, PFAM = PF00933;PF14310;PF01915)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf00422_194493-206257' '(p48981|bgal_maldo : 1095.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) - Malus domestica (Apple) (Malus sylvestris) & (at3g13750 : 1065.0) beta-galactosidase, glycosyl hydrolase family 35; beta galactosidase 1 (BGAL1); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2213 Blast hits to 2119 proteins in 468 species: Archae - 15; Bacteria - 882; Metazoa - 391; Fungi - 211; Plants - 629; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|35717 : 828.0) no description available & (gnl|cdd|85374 : 435.0) no description available & (reliability: 2094.0) & (original description: Putative bGal, Description = Beta-galactosidase, PFAM = PF01301)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf00630_386264-397902' '(at1g78060 : 941.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: apoplast, cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G10560.1); Has 9183 Blast hits to 7917 proteins in 1177 species: Archae - 63; Bacteria - 5533; Metazoa - 16; Fungi - 1604; Plants - 525; Viruses - 0; Other Eukaryotes - 1442 (source: NCBI BLink). & (p83344|xynb_prupe : 331.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (gnl|cdd|31661 : 191.0) no description available & (reliability: 1882.0) & (original description: Putative BXL7, Description = Probable beta-D-xylosidase 7, PFAM = PF00933;PF14310;PF01915)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf00663_459059-470164' '(at4g25810 : 367.0) xyloglucan endotransglycosylase-related protein (XTR6); xyloglucan endotransglycosylase 6 (XTR6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein (TAIR:AT5G57560.1); Has 2255 Blast hits to 2235 proteins in 316 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 455; Plants - 1384; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (p35694|bru1_soybn : 361.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 331.0) no description available & (reliability: 706.0) & (original description: Putative XTH23, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 23, PFAM = PF06955;PF00722)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf00761_393316-397223' '(at5g66460 : 428.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 109.0) no description available & (reliability: 856.0) & (original description: Putative MAN1, Description = Mannan endo-1,4-beta-mannosidase 1, PFAM = PF00150)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf00766_133534-149440' '(at3g26430 : 503.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: alpha-fucosidase 1 (TAIR:AT1G67830.1); Has 3218 Blast hits to 3172 proteins in 104 species: Archae - 0; Bacteria - 74; Metazoa - 0; Fungi - 6; Plants - 3136; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (q7y1x1|est_hevbr : 430.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|58514 : 317.0) no description available & (reliability: 920.0) & (original description: Putative ache, Description = GDSL-like lipase/acylhydrolase, PFAM = PF00657)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf00996_274304-277803' '(at4g14130 : 356.0) xyloglucan endotransglycosylase-related protein (XTR7); xyloglucan endotransglucosylase/hydrolase 15 (XTH15); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: N-terminal protein myristoylation, carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 16 (TAIR:AT3G23730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35694|bru1_soybn : 353.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 332.0) no description available & (reliability: 684.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf01184_1493012-1497203' '(at5g66460 : 439.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 96.6) no description available & (reliability: 878.0) & (original description: Putative MAN2, Description = Mannan endo-1,4-beta-mannosidase 2, PFAM = PF00150)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf01209_484105-490843' '(at3g19620 : 771.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: beta-D-xylosidase 4 (TAIR:AT5G64570.1); Has 9087 Blast hits to 7801 proteins in 1160 species: Archae - 63; Bacteria - 5399; Metazoa - 17; Fungi - 1628; Plants - 528; Viruses - 0; Other Eukaryotes - 1452 (source: NCBI BLink). & (p83344|xynb_prupe : 378.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (gnl|cdd|31661 : 196.0) no description available & (reliability: 1542.0) & (original description: Putative Sb03g012290, Description = Putative uncharacterized protein Sb03g012290, PFAM = PF14310;PF01915;PF00933)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf01591_28500-35914' '(at5g57550 : 340.0) xyloglucan endotransglycosylase-related protein (XTR3); xyloglucan endotransglucosylase/hydrolase 25 (XTH25); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29536 : 317.0) no description available & (p35694|bru1_soybn : 316.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (reliability: 644.0) & (original description: Putative xet1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf01894_194314-200825' '(at5g64570 : 1042.0) Encodes a beta-d-xylosidase that belongs to family 3 of glycoside hydrolases.; beta-D-xylosidase 4 (XYL4); FUNCTIONS IN: xylan 1,4-beta-xylosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: xylan catabolic process; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: beta-xylosidase 3 (TAIR:AT5G09730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p83344|xynb_prupe : 427.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (gnl|cdd|85134 : 193.0) no description available & (reliability: 2084.0) & (original description: Putative Xyl2, Description = Beta-xylosidase/alpha-L-arabinofuranosidase 2, PFAM = PF00933;PF01915;PF14310)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf02348_591555-601006' '(at1g58370 : 1252.0) Encodes a protein with xylanase activity.; RXF12; FUNCTIONS IN: endo-1,4-beta-xylanase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein (TAIR:AT1G10050.1); Has 2572 Blast hits to 2336 proteins in 449 species: Archae - 10; Bacteria - 1384; Metazoa - 31; Fungi - 355; Plants - 353; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink). & (gnl|cdd|84699 : 233.0) no description available & (reliability: 2504.0) & (original description: Putative xynZ, Description = Beta-xylanase, PFAM = PF00331;PF02018;PF02018;PF02018)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf02375_376815-383552' '(at1g58370 : 1282.0) Encodes a protein with xylanase activity.; RXF12; FUNCTIONS IN: endo-1,4-beta-xylanase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein (TAIR:AT1G10050.1); Has 2572 Blast hits to 2336 proteins in 449 species: Archae - 10; Bacteria - 1384; Metazoa - 31; Fungi - 355; Plants - 353; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink). & (gnl|cdd|84699 : 244.0) no description available & (reliability: 2564.0) & (original description: Putative Xyn1, Description = Endo-1,4-beta-xylanase, PFAM = PF00331;PF02018;PF02018;PF02018)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf02413_186870-192308' '(at5g57550 : 379.0) xyloglucan endotransglycosylase-related protein (XTR3); xyloglucan endotransglucosylase/hydrolase 25 (XTH25); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35694|bru1_soybn : 364.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 329.0) no description available & (reliability: 724.0) & (original description: Putative XTH25, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 25, PFAM = PF06955;PF00722)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf02413_227990-234096' '(at5g57550 : 358.0) xyloglucan endotransglycosylase-related protein (XTR3); xyloglucan endotransglucosylase/hydrolase 25 (XTH25); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29536 : 331.0) no description available & (p35694|bru1_soybn : 329.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (reliability: 672.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF00722;PF06955)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf02459_445735-449746' '(at5g66460 : 440.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 102.0) no description available & (reliability: 880.0) & (original description: Putative MAN2, Description = Mannan endo-1,4-beta-mannosidase 2, PFAM = PF00150)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf03143_1147990-1154143' '(at3g26430 : 507.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: alpha-fucosidase 1 (TAIR:AT1G67830.1); Has 3218 Blast hits to 3172 proteins in 104 species: Archae - 0; Bacteria - 74; Metazoa - 0; Fungi - 6; Plants - 3136; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (q7y1x1|est_hevbr : 432.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|58514 : 319.0) no description available & (reliability: 930.0) & (original description: Putative ache, Description = GDSL-like lipase/acylhydrolase, PFAM = PF00657)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf03881_28534-35196' '(at5g64570 : 1040.0) Encodes a beta-d-xylosidase that belongs to family 3 of glycoside hydrolases.; beta-D-xylosidase 4 (XYL4); FUNCTIONS IN: xylan 1,4-beta-xylosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: xylan catabolic process; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: beta-xylosidase 3 (TAIR:AT5G09730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p83344|xynb_prupe : 426.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (gnl|cdd|85134 : 195.0) no description available & (reliability: 2080.0) & (original description: Putative Xyl2, Description = Beta-xylosidase/alpha-L-arabinofuranosidase 2, PFAM = PF14310;PF00933;PF01915)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf04392_426191-431777' '(at4g25810 : 394.0) xyloglucan endotransglycosylase-related protein (XTR6); xyloglucan endotransglycosylase 6 (XTR6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein (TAIR:AT5G57560.1); Has 2255 Blast hits to 2235 proteins in 316 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 455; Plants - 1384; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (p35694|bru1_soybn : 371.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 336.0) no description available & (reliability: 728.0) & (original description: Putative xth2, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF00722;PF06955)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf05304_1156824-1160866' '(at3g10890 : 433.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: central cell, petal, embryo, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10900.1); Has 765 Blast hits to 758 proteins in 196 species: Archae - 23; Bacteria - 223; Metazoa - 0; Fungi - 184; Plants - 307; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|33716 : 112.0) no description available & (reliability: 866.0) & (original description: Putative MAN1, Description = Mannan endo-1,4-beta-mannosidase 1, PFAM = PF00150)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf05702_309186-312242' '(at3g23730 : 380.0) xyloglucan endotransglucosylase/hydrolase 16 (XTH16); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 15 (TAIR:AT4G14130.1); Has 2187 Blast hits to 2165 proteins in 308 species: Archae - 0; Bacteria - 273; Metazoa - 0; Fungi - 414; Plants - 1389; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (p35694|bru1_soybn : 358.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 329.0) no description available & (reliability: 684.0) & (original description: Putative XTH16, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 16, PFAM = PF00722;PF06955)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf05890_276567-282872' '(at2g28100 : 672.0) Encodes a protein with α-fucosidase activity. The activity was assessed on 2'-fucosyl-lactitol. AtFUC1 was not able to act on XXFG substrates, at least when heterologously expressed in Pichia pastoris. The enzyme has been postulated to act on fucosylated substrates other than xyloglucan oligosaccharides. was shown (Pichia pastoris) to hydrolyze fucose in 3- and 4-linkage , hence was characterized as alpha-L-3,4-fucosidase; alpha-L-fucosidase 1 (FUC1); FUNCTIONS IN: alpha-L-fucosidase activity; INVOLVED IN: glycoprotein catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 29 (InterPro:IPR000933), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 2006 Blast hits to 1993 proteins in 389 species: Archae - 18; Bacteria - 1470; Metazoa - 203; Fungi - 6; Plants - 70; Viruses - 0; Other Eukaryotes - 239 (source: NCBI BLink). & (q7xur3|fuco1_orysa : 612.0) Putative alpha-L-fucosidase 1 precursor (EC 3.2.1.51) (Alpha-L-fucoside fucohydrolase) - Oryza sativa (Rice) & (gnl|cdd|33467 : 219.0) no description available & (gnl|cdd|38550 : 162.0) no description available & (reliability: 1344.0) & (original description: Putative FUC1, Description = Alpha-L-fucosidase 1, PFAM = PF01120)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf06171_76977-82230' '(at5g66460 : 543.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 108.0) no description available & (reliability: 1086.0) & (original description: Putative MAN7, Description = Mannan endo-1,4-beta-mannosidase 7, PFAM = PF00150)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf06375_56962-63534' '(at1g78060 : 986.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: apoplast, cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G10560.1); Has 9183 Blast hits to 7917 proteins in 1177 species: Archae - 63; Bacteria - 5533; Metazoa - 16; Fungi - 1604; Plants - 525; Viruses - 0; Other Eukaryotes - 1442 (source: NCBI BLink). & (p83344|xynb_prupe : 340.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (gnl|cdd|31661 : 204.0) no description available & (reliability: 1972.0) & (original description: Putative BXL7, Description = Probable beta-D-xylosidase 7, PFAM = PF01915;PF00933;PF14310)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf06535_261619-274255' '(at5g49360 : 1085.0) Encodes a bifunctional {beta}-D-xylosidase/{alpha}-L-arabinofuranosidase required for pectic arabinan modification. Located in the extracellular matrix. Gene is expressed specifically in tissues undergoing secondary wall thickening. This is a member of glycosyl hydrolase family 3 and has six other closely related members.; beta-xylosidase 1 (BXL1); FUNCTIONS IN: alpha-N-arabinofuranosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: seed coat development; LOCATED IN: apoplast, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: beta-xylosidase 2 (TAIR:AT1G02640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p83344|xynb_prupe : 630.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (gnl|cdd|85764 : 196.0) no description available & (reliability: 2170.0) & (original description: Putative BXL1, Description = Beta-D-xylosidase 1, PFAM = PF14310;PF00933;PF01915)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf06716_91794-103918' '(at3g10740 : 926.0) Encodes a bifunctional alpha-l-arabinofuranosidase/beta-d-xylosidase that belongs to family 51 of glycoside hydrolases. It may be involved in cell wall modification.; alpha-L-arabinofuranosidase 1 (ASD1); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xylan 1,4-beta-xylosidase activity, alpha-N-arabinofuranosidase activity; INVOLVED IN: xylan catabolic process; LOCATED IN: apoplast, vacuole, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-L-arabinofuranosidase, C-terminal (InterPro:IPR010720), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: alpha-L-arabinofuranosidase 2 (TAIR:AT5G26120.1); Has 1627 Blast hits to 1611 proteins in 407 species: Archae - 8; Bacteria - 1238; Metazoa - 0; Fungi - 173; Plants - 169; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|33336 : 140.0) no description available & (reliability: 1852.0) & (original description: Putative ASD1, Description = Alpha-L-arabinofuranosidase 1, PFAM = PF06964)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf06884_124192-128499' '(at2g28100 : 477.0) Encodes a protein with α-fucosidase activity. The activity was assessed on 2'-fucosyl-lactitol. AtFUC1 was not able to act on XXFG substrates, at least when heterologously expressed in Pichia pastoris. The enzyme has been postulated to act on fucosylated substrates other than xyloglucan oligosaccharides. was shown (Pichia pastoris) to hydrolyze fucose in 3- and 4-linkage , hence was characterized as alpha-L-3,4-fucosidase; alpha-L-fucosidase 1 (FUC1); FUNCTIONS IN: alpha-L-fucosidase activity; INVOLVED IN: glycoprotein catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 29 (InterPro:IPR000933), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 2006 Blast hits to 1993 proteins in 389 species: Archae - 18; Bacteria - 1470; Metazoa - 203; Fungi - 6; Plants - 70; Viruses - 0; Other Eukaryotes - 239 (source: NCBI BLink). & (q7xur3|fuco1_orysa : 451.0) Putative alpha-L-fucosidase 1 precursor (EC 3.2.1.51) (Alpha-L-fucoside fucohydrolase) - Oryza sativa (Rice) & (gnl|cdd|33467 : 207.0) no description available & (gnl|cdd|38550 : 132.0) no description available & (reliability: 954.0) & (original description: Putative FUC1, Description = Alpha-L-fucosidase 1, PFAM = PF01120)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf07027_397990-400622' '(p45582|bgal_aspof : 100.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (at1g45130 : 99.4) beta-galactosidase 5 (BGAL5); FUNCTIONS IN: cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Glycoside hydrolase, family 35 (InterPro:IPR001944), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2206 Blast hits to 2062 proteins in 469 species: Archae - 15; Bacteria - 946; Metazoa - 364; Fungi - 218; Plants - 593; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|35717 : 93.8) no description available & (gnl|cdd|85374 : 81.0) no description available & (reliability: 186.4) & (original description: Putative teg1A, Description = Beta-galactosidase, PFAM = PF01301)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf07244_60647-63772' '(at4g14130 : 362.0) xyloglucan endotransglycosylase-related protein (XTR7); xyloglucan endotransglucosylase/hydrolase 15 (XTH15); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: N-terminal protein myristoylation, carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 16 (TAIR:AT3G23730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35694|bru1_soybn : 357.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 331.0) no description available & (reliability: 680.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF00722;PF06955)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf07608_235805-241969' '(at4g33840 : 529.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 185.0) no description available & (reliability: 1058.0) & (original description: Putative Sb01g043720, Description = Putative uncharacterized protein Sb01g043720, PFAM = PF00331;PF02018)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf07882_2448-6341' '(at3g10890 : 435.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: central cell, petal, embryo, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10900.1); Has 765 Blast hits to 758 proteins in 196 species: Archae - 23; Bacteria - 223; Metazoa - 0; Fungi - 184; Plants - 307; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|33716 : 107.0) no description available & (reliability: 870.0) & (original description: Putative MAN1, Description = Mannan endo-1,4-beta-mannosidase 1, PFAM = PF00150)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf09505_171063-176787' '(at4g33840 : 547.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 188.0) no description available & (reliability: 1094.0) & (original description: Putative BnaAnng29520D, Description = BnaAnng29520D protein, PFAM = PF00331)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf09505_171279-174402' '(at4g33840 : 229.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 147.0) no description available & (reliability: 458.0) & (original description: Putative xyn3, Description = Glycosyl hydrolase family 10 protein, PFAM = PF00331)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf09654_141856-146995' '(at4g33840 : 518.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 191.0) no description available & (reliability: 1036.0) & (original description: Putative BnaAnng29520D, Description = BnaAnng29520D protein, PFAM = PF00331;PF02018)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf09906_175625-180939' '(at5g01930 : 654.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT5G66460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 116.0) no description available & (reliability: 1308.0) & (original description: Putative MAN6, Description = Mannan endo-1,4-beta-mannosidase 6, PFAM = PF00150)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf10835_1799-6777' '(at5g66460 : 586.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 112.0) no description available & (reliability: 1172.0) & (original description: Putative MAN7, Description = Mannan endo-1,4-beta-mannosidase 7, PFAM = PF00150)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf14470_7844-10954' '(at3g23730 : 348.0) xyloglucan endotransglucosylase/hydrolase 16 (XTH16); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 15 (TAIR:AT4G14130.1); Has 2187 Blast hits to 2165 proteins in 308 species: Archae - 0; Bacteria - 273; Metazoa - 0; Fungi - 414; Plants - 1389; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|29536 : 330.0) no description available & (p35694|bru1_soybn : 319.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (reliability: 634.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T '10.6.2' 'cell wall.degradation.mannan-xylose-arabinose-fucose' 'niben101scf16089_26458-33301' '(at5g01930 : 648.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT5G66460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 114.0) no description available & (reliability: 1296.0) & (original description: Putative MAN4, Description = Mannan endo-1,4-beta-mannosidase 4, PFAM = PF00150)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold2493_59210-69639' '(at5g04310 : 581.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G54920.1); Has 1753 Blast hits to 1747 proteins in 285 species: Archae - 0; Bacteria - 762; Metazoa - 0; Fungi - 280; Plants - 694; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (p40973|pel_lillo : 411.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 225.0) no description available & (reliability: 1162.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold5135_53299-59127' '(at1g14420 : 449.0) AT59; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: plant-type cell wall organization; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectate lyase, N-terminal (InterPro:IPR007524), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT2G02720.1); Has 1736 Blast hits to 1725 proteins in 285 species: Archae - 2; Bacteria - 722; Metazoa - 0; Fungi - 281; Plants - 703; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (p40973|pel_lillo : 394.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 233.0) no description available & (reliability: 898.0) & (original description: Putative LAT59, Description = Probable pectate lyase P59, PFAM = PF00544;PF04431)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold5537_39149-42830' '(at1g11920 : 504.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: root hair specific 14 (TAIR:AT4G22080.1); Has 1675 Blast hits to 1668 proteins in 273 species: Archae - 0; Bacteria - 759; Metazoa - 0; Fungi - 209; Plants - 697; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (p40973|pel_lillo : 332.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 220.0) no description available & (reliability: 1008.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold9388_12610-17249' '(at1g78400 : 280.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein (TAIR:AT2G33160.1); Has 3713 Blast hits to 3693 proteins in 464 species: Archae - 4; Bacteria - 847; Metazoa - 14; Fungi - 1259; Plants - 1481; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (q39786|pglr_goshi : 249.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Gossypium hirsutum (Upland cotton) & (gnl|cdd|84675 : 225.0) no description available & (reliability: 560.0) & (original description: Putative plaa2, Description = Polygalacturonase, PFAM = PF00295;PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold13479_25042-32414' '(at3g16850 : 510.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G06770.2); Has 3152 Blast hits to 3138 proteins in 427 species: Archae - 6; Bacteria - 1355; Metazoa - 8; Fungi - 358; Plants - 1330; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|34993 : 172.0) no description available & (p35338|pglr2_maize : 91.3) Exopolygalacturonase precursor (EC 3.2.1.67) (ExoPG) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) - Zea mays (Maize) & (reliability: 1020.0) & (original description: Putative At5g49215, Description = Pectin lyase-like superfamily protein, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold16322_19833-34407' '(at2g22620 : 604.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT4G37950.1). & (gnl|cdd|69561 : 234.0) no description available & (reliability: 1208.0) & (original description: Putative PGSC0003DMG400015675, Description = Rhamnogalacturonate lyase, PFAM = PF14686;PF14683;PF06045)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold27951_246-17000' '(at1g09910 : 709.0) Rhamnogalacturonate lyase family protein; FUNCTIONS IN: lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09890.1); Has 300 Blast hits to 279 proteins in 59 species: Archae - 0; Bacteria - 45; Metazoa - 0; Fungi - 84; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69561 : 249.0) no description available & (reliability: 1418.0) & (original description: Putative At1g09880, Description = Rhamnogalacturonate lyase, PFAM = PF06045;PF14683;PF14686)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold34762_1555-5393' '(at3g61490 : 716.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G23500.1). & (gnl|cdd|34993 : 195.0) no description available & (p26216|pglr1_maize : 97.8) Exopolygalacturonase precursor (EC 3.2.1.67) (ExoPG) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) - Zea mays (Maize) & (reliability: 1432.0) & (original description: Putative BnaA03g52530D, Description = BnaA03g52530D protein, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold38518_2981-12712' '(at4g33440 : 605.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G62110.1); Has 4317 Blast hits to 4300 proteins in 507 species: Archae - 6; Bacteria - 1547; Metazoa - 14; Fungi - 1180; Plants - 1416; Viruses - 2; Other Eukaryotes - 152 (source: NCBI BLink). & (gnl|cdd|34993 : 205.0) no description available & (p35336|pglr_actch : 87.8) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (reliability: 1210.0) & (original description: Putative GSVIVT00026920001, Description = Probable polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold40652_332-5144' '(at1g09910 : 263.0) Rhamnogalacturonate lyase family protein; FUNCTIONS IN: lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09890.1); Has 300 Blast hits to 279 proteins in 59 species: Archae - 0; Bacteria - 45; Metazoa - 0; Fungi - 84; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative At1g09880, Description = Rhamnogalacturonate lyase, PFAM = PF14683;PF14686)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold46649_3057-7880' '(p35336|pglr_actch : 423.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (at3g07970 : 397.0) Required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation.; QUARTET 2 (QRT2); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G57510.1); Has 4184 Blast hits to 4170 proteins in 494 species: Archae - 6; Bacteria - 1270; Metazoa - 14; Fungi - 1271; Plants - 1492; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|84675 : 305.0) no description available & (reliability: 794.0) & (original description: Putative QRT2, Description = Polygalacturonase QRT2, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold57477_435-5369' '(at1g17150 : 315.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G43080.1); Has 3925 Blast hits to 3904 proteins in 469 species: Archae - 4; Bacteria - 1051; Metazoa - 14; Fungi - 1254; Plants - 1494; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (q39786|pglr_goshi : 302.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Gossypium hirsutum (Upland cotton) & (gnl|cdd|84675 : 280.0) no description available & (reliability: 630.0) & (original description: Putative PG2C, Description = Exopolygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold66860_2055-10071' '(at3g42950 : 724.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G19170.1); Has 4385 Blast hits to 4369 proteins in 520 species: Archae - 6; Bacteria - 1604; Metazoa - 14; Fungi - 1181; Plants - 1422; Viruses - 0; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|34993 : 225.0) no description available & (q39786|pglr_goshi : 101.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Gossypium hirsutum (Upland cotton) & (reliability: 1448.0) & (original description: Putative BnaA08g22190D, Description = BnaA08g22190D protein, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.3scaffold80624_1625-5691' '(at1g70370 : 669.0) polygalacturonase 2 (PG2); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: BURP domain-containing protein (TAIR:AT1G23760.1). & (gnl|cdd|66831 : 262.0) no description available & (reliability: 1338.0) & (original description: Putative PGL3, Description = Polygalacturonase 1 beta-like protein 3, PFAM = PF03181)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold587_331117-338553' '(at4g23500 : 680.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G61490.3); Has 4172 Blast hits to 4159 proteins in 509 species: Archae - 6; Bacteria - 1479; Metazoa - 14; Fungi - 1128; Plants - 1399; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink). & (gnl|cdd|34993 : 199.0) no description available & (p26216|pglr1_maize : 91.3) Exopolygalacturonase precursor (EC 3.2.1.67) (ExoPG) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) - Zea mays (Maize) & (reliability: 1360.0) & (original description: Putative PG2, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold820_388612-404094' '(at2g22620 : 764.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT4G37950.1). & (gnl|cdd|69561 : 246.0) no description available & (reliability: 1528.0) & (original description: Putative At2g22620, Description = Putative uncharacterized protein At2g22620, PFAM = PF14686;PF06045;PF14683)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold1195_72962-82093' '(at3g61490 : 716.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G23500.1). & (gnl|cdd|34993 : 194.0) no description available & (p35338|pglr2_maize : 107.0) Exopolygalacturonase precursor (EC 3.2.1.67) (ExoPG) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) - Zea mays (Maize) & (reliability: 1432.0) & (original description: Putative pco064986a, Description = Putative polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold1308_24756-208353' '(at1g09890 : 750.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09910.1); Has 301 Blast hits to 285 proteins in 64 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 84; Plants - 166; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69561 : 177.0) no description available & (reliability: 1500.0) & (original description: Putative BnaA06g05820D, Description = BnaA06g05820D protein, PFAM = PF14683;PF14686;PF06045;PF06045)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold1308_98864-132378' '(at1g09890 : 501.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09910.1); Has 301 Blast hits to 285 proteins in 64 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 84; Plants - 166; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69561 : 261.0) no description available & (reliability: 1002.0) & (original description: Putative At1g09880, Description = Rhamnogalacturonate lyase B-like protein, PFAM = PF06045;PF06045)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold2067_259614-271663' '(at1g80170 : 166.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G70500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35336|pglr_actch : 115.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (reliability: 332.0) & (original description: Putative PG, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold2085_278655-283839' '(at1g67750 : 634.0) Pectate lyase family protein; FUNCTIONS IN: pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G63180.1); Has 1739 Blast hits to 1731 proteins in 272 species: Archae - 0; Bacteria - 767; Metazoa - 0; Fungi - 258; Plants - 701; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p40973|pel_lillo : 416.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 229.0) no description available & (reliability: 1268.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold2430_85418-221399' '(at1g78400 : 129.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein (TAIR:AT2G33160.1); Has 3713 Blast hits to 3693 proteins in 464 species: Archae - 4; Bacteria - 847; Metazoa - 14; Fungi - 1259; Plants - 1481; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (q39786|pglr_goshi : 100.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Gossypium hirsutum (Upland cotton) & (reliability: 258.0) & (original description: Putative PGSC0003DMG400017348, Description = Polygalacturonase/glycoside hydrolase family protein, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold2897_217729-224014' '(at5g04310 : 582.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G54920.1); Has 1753 Blast hits to 1747 proteins in 285 species: Archae - 0; Bacteria - 762; Metazoa - 0; Fungi - 280; Plants - 694; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (p40973|pel_lillo : 399.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 231.0) no description available & (reliability: 1164.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold3054_269393-280395' '(at5g04310 : 579.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G54920.1); Has 1753 Blast hits to 1747 proteins in 285 species: Archae - 0; Bacteria - 762; Metazoa - 0; Fungi - 280; Plants - 694; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (p40973|pel_lillo : 390.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 228.0) no description available & (reliability: 1158.0) & (original description: Putative PMR6, Description = Probable pectate lyase 13, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold4735_76455-80875' '(p48979|pglr_prupe : 223.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (at2g43870 : 187.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G59850.1); Has 4109 Blast hits to 4094 proteins in 490 species: Archae - 4; Bacteria - 1205; Metazoa - 14; Fungi - 1270; Plants - 1494; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|84675 : 124.0) no description available & (reliability: 374.0) & (original description: Putative PGC, Description = Polygalacturonase C, PFAM = PF00295;PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold5393_57916-63635' '(at4g23500 : 653.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G61490.3); Has 4172 Blast hits to 4159 proteins in 509 species: Archae - 6; Bacteria - 1479; Metazoa - 14; Fungi - 1128; Plants - 1399; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink). & (gnl|cdd|34993 : 188.0) no description available & (p35336|pglr_actch : 83.6) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (reliability: 1306.0) & (original description: Putative GSVIVT00026920001, Description = Probable polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold5871_90221-95536' '(at3g15720 : 290.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: response to cyclopentenone, carbohydrate metabolic process; LOCATED IN: anchored to membrane, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G27530.1); Has 4574 Blast hits to 4550 proteins in 589 species: Archae - 6; Bacteria - 1461; Metazoa - 14; Fungi - 1454; Plants - 1502; Viruses - 2; Other Eukaryotes - 135 (source: NCBI BLink). & (p35336|pglr_actch : 263.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 247.0) no description available & (reliability: 580.0) & (original description: Putative pgaz, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'nbv0.5scaffold7566_31020-40485' '(at1g48100 : 656.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G02460.1); Has 4526 Blast hits to 4502 proteins in 576 species: Archae - 8; Bacteria - 1381; Metazoa - 30; Fungi - 1439; Plants - 1518; Viruses - 5; Other Eukaryotes - 145 (source: NCBI BLink). & (p35336|pglr_actch : 289.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 257.0) no description available & (reliability: 1312.0) & (original description: Putative At1g48100, Description = Polygalacturonase At1g48100, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00000648ctg004_4110-10824' '(at2g22620 : 575.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT4G37950.1). & (reliability: 1150.0) & (original description: Putative At1g09880, Description = Rhamnogalacturonate lyase B-like protein, PFAM = PF06045;PF14683;PF14686)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00001161ctg003_14829-20167' '(at1g67750 : 636.0) Pectate lyase family protein; FUNCTIONS IN: pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G63180.1); Has 1739 Blast hits to 1731 proteins in 272 species: Archae - 0; Bacteria - 767; Metazoa - 0; Fungi - 258; Plants - 701; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p40973|pel_lillo : 416.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 230.0) no description available & (reliability: 1272.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00003054ctg007_8526-12992' '(at5g17200 : 286.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sperm cell, sepal, flower, pedicel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G15720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p48978|pglr_maldo : 241.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|84675 : 236.0) no description available & (reliability: 572.0) & (original description: Putative BnaC09g40790D, Description = BnaC09g40790D protein, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00005744ctg031_17993-22791' '(at2g43870 : 471.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G59850.1); Has 4109 Blast hits to 4094 proteins in 490 species: Archae - 4; Bacteria - 1205; Metazoa - 14; Fungi - 1270; Plants - 1494; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (p48979|pglr_prupe : 460.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (gnl|cdd|84675 : 260.0) no description available & (reliability: 942.0) & (original description: Putative At2g43860, Description = Probable polygalacturonase At2g43860, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00005902ctg007_5528-12073' '(at3g15720 : 320.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: response to cyclopentenone, carbohydrate metabolic process; LOCATED IN: anchored to membrane, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G27530.1); Has 4574 Blast hits to 4550 proteins in 589 species: Archae - 6; Bacteria - 1461; Metazoa - 14; Fungi - 1454; Plants - 1502; Viruses - 2; Other Eukaryotes - 135 (source: NCBI BLink). & (p35336|pglr_actch : 273.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 265.0) no description available & (reliability: 640.0) & (original description: Putative At3g15720, Description = Probable polygalacturonase At3g15720, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00006041ctg006_2239-9888' '(at4g13710 : 674.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT3G24230.1). & (p40973|pel_lillo : 419.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 228.0) no description available & (reliability: 1348.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00006698ctg006_8617-13037' '(p48979|pglr_prupe : 521.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (at3g59850 : 479.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G43870.1); Has 4315 Blast hits to 4302 proteins in 546 species: Archae - 4; Bacteria - 1265; Metazoa - 14; Fungi - 1413; Plants - 1493; Viruses - 2; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|84675 : 255.0) no description available & (reliability: 958.0) & (original description: Putative MPG1, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00008717ctg008_1428-3622' '(p40973|pel_lillo : 301.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (at5g15110 : 300.0) Pectate lyase family protein; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectate lyase, N-terminal (InterPro:IPR007524), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT3G01270.1); Has 1602 Blast hits to 1594 proteins in 273 species: Archae - 0; Bacteria - 694; Metazoa - 0; Fungi - 171; Plants - 721; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|47932 : 178.0) no description available & (reliability: 600.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00008717ctg011_1-1213' '(at1g14420 : 165.0) AT59; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: plant-type cell wall organization; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectate lyase, N-terminal (InterPro:IPR007524), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT2G02720.1); Has 1736 Blast hits to 1725 proteins in 285 species: Archae - 2; Bacteria - 722; Metazoa - 0; Fungi - 281; Plants - 703; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (p40972|pel_tobac : 149.0) Pectate lyase precursor (EC 4.2.2.2) - Nicotiana tabacum (Common tobacco) & (reliability: 330.0) & (original description: Putative AT59, Description = Pectate lyase, PFAM = )' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00010452ctg024_1037-4198' '(q05967|pglr_tobac : 431.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Nicotiana tabacum (Common tobacco) & (at3g07820 : 293.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G07830.1); Has 3636 Blast hits to 3621 proteins in 442 species: Archae - 6; Bacteria - 812; Metazoa - 14; Fungi - 1257; Plants - 1440; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|84675 : 288.0) no description available & (reliability: 586.0) & (original description: Putative PG1, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00011461ctg017_9779-13260' '(p40972|pel_tobac : 555.0) Pectate lyase precursor (EC 4.2.2.2) - Nicotiana tabacum (Common tobacco) & (at3g01270 : 431.0) Pectate lyase family protein; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectate lyase, N-terminal (InterPro:IPR007524), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT5G15110.1); Has 1587 Blast hits to 1580 proteins in 266 species: Archae - 0; Bacteria - 700; Metazoa - 0; Fungi - 174; Plants - 701; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|47932 : 213.0) no description available & (reliability: 862.0) & (original description: Putative AT59, Description = Pectate lyase, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00013050ctg003_1-4976' '(at3g61490 : 714.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G23500.1). & (gnl|cdd|34993 : 190.0) no description available & (p35338|pglr2_maize : 107.0) Exopolygalacturonase precursor (EC 3.2.1.67) (ExoPG) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) - Zea mays (Maize) & (reliability: 1428.0) & (original description: Putative GSVIVT00026920001, Description = Probable polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00013375ctg004_7782-12682' '(at2g33160 : 404.0) glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein; FUNCTIONS IN: polygalacturonase activity, nucleic acid binding; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G43080.1); Has 4055 Blast hits to 4034 proteins in 453 species: Archae - 8; Bacteria - 853; Metazoa - 14; Fungi - 1250; Plants - 1822; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (q39786|pglr_goshi : 337.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Gossypium hirsutum (Upland cotton) & (gnl|cdd|84675 : 276.0) no description available & (reliability: 808.0) & (original description: Putative plaa2, Description = Exopolygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00013839ctg010_1-3799' '(at3g42950 : 625.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G19170.1); Has 4385 Blast hits to 4369 proteins in 520 species: Archae - 6; Bacteria - 1604; Metazoa - 14; Fungi - 1181; Plants - 1422; Viruses - 0; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|34993 : 162.0) no description available & (q39786|pglr_goshi : 85.9) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Gossypium hirsutum (Upland cotton) & (reliability: 1250.0) & (original description: Putative PG5, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00016770ctg003_39615-44530' '(at1g02460 : 579.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: stem, root, stamen, seed; EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G01890.1); Has 5413 Blast hits to 5130 proteins in 651 species: Archae - 6; Bacteria - 1539; Metazoa - 261; Fungi - 1343; Plants - 1850; Viruses - 100; Other Eukaryotes - 314 (source: NCBI BLink). & (p35336|pglr_actch : 298.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 276.0) no description available & (reliability: 1158.0) & (original description: Putative At1g48100, Description = Polygalacturonase At1g48100, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00018164ctg031_14-6500' '(at3g07970 : 309.0) Required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation.; QUARTET 2 (QRT2); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G57510.1); Has 4184 Blast hits to 4170 proteins in 494 species: Archae - 6; Bacteria - 1270; Metazoa - 14; Fungi - 1271; Plants - 1492; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (p48978|pglr_maldo : 288.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|84675 : 256.0) no description available & (reliability: 618.0) & (original description: Putative QRT2, Description = Polygalacturonase QRT2, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00024093ctg008_1-7301' '(q05967|pglr_tobac : 297.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Nicotiana tabacum (Common tobacco) & (at1g02790 : 284.0) encodes a exopolygalacturonase.; polygalacturonase 4 (PGA4); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G07830.1); Has 4155 Blast hits to 4140 proteins in 501 species: Archae - 6; Bacteria - 1251; Metazoa - 14; Fungi - 1275; Plants - 1482; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|84675 : 276.0) no description available & (reliability: 568.0) & (original description: Putative PGA3, Description = Exopolygalacturonase clone GBGE184, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00028897ctg010_9361-19157' '(gnl|cdd|69561 : 229.0) no description available & (at1g09910 : 194.0) Rhamnogalacturonate lyase family protein; FUNCTIONS IN: lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09890.1); Has 300 Blast hits to 279 proteins in 59 species: Archae - 0; Bacteria - 45; Metazoa - 0; Fungi - 84; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative At1g09880, Description = Rhamnogalacturonate lyase B-like protein, PFAM = PF06045)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00029149ctg012_1-11589' '(gnl|cdd|69561 : 230.0) no description available & (at1g09910 : 195.0) Rhamnogalacturonate lyase family protein; FUNCTIONS IN: lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09890.1); Has 300 Blast hits to 279 proteins in 59 species: Archae - 0; Bacteria - 45; Metazoa - 0; Fungi - 84; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative At1g09880, Description = Rhamnogalacturonate lyase B-like protein, PFAM = PF06045)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00029940ctg003_51935-62762' '(at3g54920 : 580.0) Powdery mildew resistant mutant encodes a pectate lyase-like protein; powdery mildew resistant 6 (PMR6); CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G04310.1); Has 2753 Blast hits to 2553 proteins in 415 species: Archae - 3; Bacteria - 1039; Metazoa - 313; Fungi - 409; Plants - 814; Viruses - 7; Other Eukaryotes - 168 (source: NCBI BLink). & (p40973|pel_lillo : 412.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 223.0) no description available & (reliability: 1160.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00032402ctg010_3839-5644' '(at4g32375 : 91.7) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Parallel beta-helix repeat (InterPro:IPR006626), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G32380.1); Has 34506 Blast hits to 17777 proteins in 1595 species: Archae - 136; Bacteria - 7511; Metazoa - 8673; Fungi - 3661; Plants - 8148; Viruses - 1351; Other Eukaryotes - 5026 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative At4g32370, Description = BnaC01g06140D protein, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00033720ctg005_1-1568' '(at5g06860 : 114.0) Encodes a polygalacturonase inhibiting protein involved in defense response. PGIPs inhibit the function of cell wall pectin degrading enzymes such as those produced by fungal pathogens. PGIP1 is induced by fungal infection.; polygalacturonase inhibiting protein 1 (PGIP1); FUNCTIONS IN: polygalacturonase inhibitor activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: polygalacturonase inhibiting protein 2 (TAIR:AT5G06870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p35334|pgip1_phavu : 97.1) Polygalacturonase inhibitor 1 precursor (Polygalacturonase-inhibiting protein) (PGIP-1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 228.0) & (original description: Putative pgip, Description = Polygalacturonase inhibiting protein, PFAM = )' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00034230ctg005_9661-15842' '(at4g23820 : 637.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G41870.1); Has 4183 Blast hits to 4168 proteins in 506 species: Archae - 6; Bacteria - 1472; Metazoa - 14; Fungi - 1146; Plants - 1414; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|34993 : 197.0) no description available & (p35338|pglr2_maize : 89.0) Exopolygalacturonase precursor (EC 3.2.1.67) (ExoPG) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) - Zea mays (Maize) & (reliability: 1274.0) & (original description: Putative GSVIVT00026920001, Description = Probable polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00052142ctg001_2761-9437' '(at3g26610 : 551.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G60590.1); Has 4342 Blast hits to 4315 proteins in 504 species: Archae - 6; Bacteria - 1404; Metazoa - 14; Fungi - 1284; Plants - 1492; Viruses - 2; Other Eukaryotes - 140 (source: NCBI BLink). & (p35336|pglr_actch : 247.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 247.0) no description available & (reliability: 1102.0) & (original description: Putative At1g48100, Description = Polygalacturonase At1g48100, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00053024ctg000_1428-4787' '(at5g04310 : 489.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G54920.1); Has 1753 Blast hits to 1747 proteins in 285 species: Archae - 0; Bacteria - 762; Metazoa - 0; Fungi - 280; Plants - 694; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (p40973|pel_lillo : 341.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 225.0) no description available & (reliability: 978.0) & (original description: Putative PL2, Description = Pectate lyase, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben044scf00061465ctg000_1-6802' '(at2g22620 : 625.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT4G37950.1). & (reliability: 1250.0) & (original description: Putative At2g22620, Description = Rhamnogalacturonate lyase-like protein, PFAM = PF14686;PF06045;PF14683)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf00046_558011-562699' '(at5g63180 : 614.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G24780.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p40973|pel_lillo : 399.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 232.0) no description available & (reliability: 1228.0) & (original description: Putative 9612, Description = Probable pectate lyase P18, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf00168_773547-778517' '(at2g43890 : 514.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G05650.1); Has 3985 Blast hits to 3965 proteins in 478 species: Archae - 4; Bacteria - 1086; Metazoa - 14; Fungi - 1267; Plants - 1489; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (p48979|pglr_prupe : 424.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (gnl|cdd|84675 : 269.0) no description available & (reliability: 1028.0) & (original description: Putative MPG1, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf00168_896518-900867' '(at2g43880 : 457.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G43890.1); Has 4195 Blast hits to 4175 proteins in 547 species: Archae - 4; Bacteria - 1296; Metazoa - 14; Fungi - 1271; Plants - 1481; Viruses - 2; Other Eukaryotes - 127 (source: NCBI BLink). & (p48979|pglr_prupe : 384.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (gnl|cdd|84675 : 259.0) no description available & (reliability: 914.0) & (original description: Putative MPG1, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf00171_17471-23607' '(at4g13710 : 682.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT3G24230.1). & (p40973|pel_lillo : 404.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 233.0) no description available & (reliability: 1364.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf00231_736249-742305' '(at1g23460 : 585.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626), Glycoside hydrolase, family 28 (InterPro:IPR000743); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G70500.1); Has 4300 Blast hits to 4283 proteins in 531 species: Archae - 4; Bacteria - 1235; Metazoa - 14; Fungi - 1418; Plants - 1493; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (p35336|pglr_actch : 352.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 296.0) no description available & (reliability: 1170.0) & (original description: Putative pga, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf00265_244027-251739' '(q05967|pglr_tobac : 305.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Nicotiana tabacum (Common tobacco) & (at1g02790 : 303.0) encodes a exopolygalacturonase.; polygalacturonase 4 (PGA4); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G07830.1); Has 4155 Blast hits to 4140 proteins in 501 species: Archae - 6; Bacteria - 1251; Metazoa - 14; Fungi - 1275; Plants - 1482; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|84675 : 275.0) no description available & (reliability: 606.0) & (original description: Putative PGA3, Description = Exopolygalacturonase clone GBGE184, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf00339_631192-637864' '(at1g14420 : 515.0) AT59; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: plant-type cell wall organization; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectate lyase, N-terminal (InterPro:IPR007524), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT2G02720.1); Has 1736 Blast hits to 1725 proteins in 285 species: Archae - 2; Bacteria - 722; Metazoa - 0; Fungi - 281; Plants - 703; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (p40973|pel_lillo : 478.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 225.0) no description available & (reliability: 1030.0) & (original description: Putative LAT59, Description = Probable pectate lyase P59, PFAM = PF00544;PF04431)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf00457_893433-903908' '(at3g53190 : 617.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G04310.1); Has 1735 Blast hits to 1728 proteins in 275 species: Archae - 0; Bacteria - 778; Metazoa - 0; Fungi - 236; Plants - 699; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (p40973|pel_lillo : 384.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 224.0) no description available & (reliability: 1234.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf00561_1-8153' '(at1g09910 : 712.0) Rhamnogalacturonate lyase family protein; FUNCTIONS IN: lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09890.1); Has 300 Blast hits to 279 proteins in 59 species: Archae - 0; Bacteria - 45; Metazoa - 0; Fungi - 84; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69561 : 220.0) no description available & (reliability: 1424.0) & (original description: Putative BnaC05g07390D, Description = BnaC05g07390D protein, PFAM = PF14686;PF14683;PF06045)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf00593_437708-441626' '(p40973|pel_lillo : 529.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (at3g01270 : 518.0) Pectate lyase family protein; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectate lyase, N-terminal (InterPro:IPR007524), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT5G15110.1); Has 1587 Blast hits to 1580 proteins in 266 species: Archae - 0; Bacteria - 700; Metazoa - 0; Fungi - 174; Plants - 701; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|47932 : 222.0) no description available & (reliability: 1036.0) & (original description: Putative AT59, Description = Pectate lyase, PFAM = PF00544;PF04431)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf00637_451089-454081' '(at5g06860 : 405.0) Encodes a polygalacturonase inhibiting protein involved in defense response. PGIPs inhibit the function of cell wall pectin degrading enzymes such as those produced by fungal pathogens. PGIP1 is induced by fungal infection.; polygalacturonase inhibiting protein 1 (PGIP1); FUNCTIONS IN: polygalacturonase inhibitor activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: polygalacturonase inhibiting protein 2 (TAIR:AT5G06870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p58822|pgip2_phavu : 298.0) Polygalacturonase inhibitor 2 precursor (Polygalacturonase-inhibiting protein) (PGIP-2) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 810.0) & (original description: Putative pgip, Description = Polygalacturonase inhibitor, PFAM = PF00560;PF13855;PF08263)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf00751_640174-644805' '(p48979|pglr_prupe : 444.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (at3g59850 : 439.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G43870.1); Has 4315 Blast hits to 4302 proteins in 546 species: Archae - 4; Bacteria - 1265; Metazoa - 14; Fungi - 1413; Plants - 1493; Viruses - 2; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|84675 : 274.0) no description available & (reliability: 878.0) & (original description: Putative MPG1, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf01155_421532-426647' '(at1g70370 : 719.0) polygalacturonase 2 (PG2); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: BURP domain-containing protein (TAIR:AT1G23760.1). & (gnl|cdd|66831 : 281.0) no description available & (reliability: 1438.0) & (original description: Putative GP1, Description = Polygalacturonase-1 non-catalytic subunit beta, PFAM = PF03181)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf01209_537783-548929' '(p35336|pglr_actch : 527.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (at3g57510 : 421.0) Encodes ADPG1, a polygalacturonase protein involved in silique and anther dihiscence. Loss of function mutations have reduced seed set, indehiscent fruit and reduced pollen shedding.; ADPG1; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: cell wall modification involved in abscission, fruit dehiscence, anther dehiscence, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: polygalacturonase abscission zone A. thaliana (TAIR:AT2G41850.1); Has 4405 Blast hits to 4383 proteins in 555 species: Archae - 8; Bacteria - 1458; Metazoa - 14; Fungi - 1288; Plants - 1499; Viruses - 2; Other Eukaryotes - 136 (source: NCBI BLink). & (gnl|cdd|84675 : 343.0) no description available & (reliability: 842.0) & (original description: Putative pga, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf01220_213489-221352' '(at3g07010 : 660.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G48900.1); Has 1586 Blast hits to 1578 proteins in 262 species: Archae - 0; Bacteria - 663; Metazoa - 0; Fungi - 221; Plants - 695; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (p40973|pel_lillo : 404.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 228.0) no description available & (reliability: 1320.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf01314_55333-66458' '(at3g07970 : 313.0) Required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation.; QUARTET 2 (QRT2); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G57510.1); Has 4184 Blast hits to 4170 proteins in 494 species: Archae - 6; Bacteria - 1270; Metazoa - 14; Fungi - 1271; Plants - 1492; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (p48978|pglr_maldo : 290.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|84675 : 262.0) no description available & (reliability: 626.0) & (original description: Putative pga, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf01362_499768-505596' '(at1g14420 : 491.0) AT59; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: plant-type cell wall organization; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectate lyase, N-terminal (InterPro:IPR007524), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT2G02720.1); Has 1736 Blast hits to 1725 proteins in 285 species: Archae - 2; Bacteria - 722; Metazoa - 0; Fungi - 281; Plants - 703; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (p40973|pel_lillo : 430.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 232.0) no description available & (reliability: 982.0) & (original description: Putative LAT59, Description = Probable pectate lyase P59, PFAM = PF00544;PF04431)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf01430_495979-501595' '(at3g16850 : 503.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G06770.2); Has 3152 Blast hits to 3138 proteins in 427 species: Archae - 6; Bacteria - 1355; Metazoa - 8; Fungi - 358; Plants - 1330; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|34993 : 171.0) no description available & (p35338|pglr2_maize : 91.7) Exopolygalacturonase precursor (EC 3.2.1.67) (ExoPG) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) - Zea mays (Maize) & (reliability: 1006.0) & (original description: Putative GSVIVT00026920001, Description = Probable polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf01655_90318-95216' '(at3g61490 : 732.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G23500.1). & (gnl|cdd|34993 : 189.0) no description available & (p35338|pglr2_maize : 108.0) Exopolygalacturonase precursor (EC 3.2.1.67) (ExoPG) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) - Zea mays (Maize) & (reliability: 1464.0) & (original description: Putative GSVIVT00026920001, Description = Probable polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf01721_84517-92217' '(p48979|pglr_prupe : 489.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (at2g43870 : 456.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G59850.1); Has 4109 Blast hits to 4094 proteins in 490 species: Archae - 4; Bacteria - 1205; Metazoa - 14; Fungi - 1270; Plants - 1494; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|84675 : 262.0) no description available & (reliability: 912.0) & (original description: Putative MPG1, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf01742_140319-143440' '(at1g60590 : 244.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G10640.1); Has 4525 Blast hits to 4468 proteins in 546 species: Archae - 6; Bacteria - 1298; Metazoa - 151; Fungi - 1295; Plants - 1596; Viruses - 3; Other Eukaryotes - 176 (source: NCBI BLink). & (p35336|pglr_actch : 139.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 133.0) no description available & (reliability: 488.0) & (original description: Putative PG, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf01773_180313-186376' '(at1g02460 : 615.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: stem, root, stamen, seed; EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G01890.1); Has 5413 Blast hits to 5130 proteins in 651 species: Archae - 6; Bacteria - 1539; Metazoa - 261; Fungi - 1343; Plants - 1850; Viruses - 100; Other Eukaryotes - 314 (source: NCBI BLink). & (p35336|pglr_actch : 295.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 255.0) no description available & (reliability: 1230.0) & (original description: Putative At1g48100, Description = Polygalacturonase At1g48100, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf01917_1294568-1302458' '(at1g09910 : 942.0) Rhamnogalacturonate lyase family protein; FUNCTIONS IN: lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09890.1); Has 300 Blast hits to 279 proteins in 59 species: Archae - 0; Bacteria - 45; Metazoa - 0; Fungi - 84; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69561 : 293.0) no description available & (reliability: 1884.0) & (original description: Putative BnaA06g05820D, Description = BnaA06g05820D protein, PFAM = PF06045;PF14686;PF14683)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf01964_160646-165480' '(at1g02460 : 556.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: stem, root, stamen, seed; EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G01890.1); Has 5413 Blast hits to 5130 proteins in 651 species: Archae - 6; Bacteria - 1539; Metazoa - 261; Fungi - 1343; Plants - 1850; Viruses - 100; Other Eukaryotes - 314 (source: NCBI BLink). & (p35336|pglr_actch : 291.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 277.0) no description available & (reliability: 1112.0) & (original description: Putative ZePG1, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf02132_182326-186438' '(p40973|pel_lillo : 492.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (at1g14420 : 484.0) AT59; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: plant-type cell wall organization; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectate lyase, N-terminal (InterPro:IPR007524), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT2G02720.1); Has 1736 Blast hits to 1725 proteins in 285 species: Archae - 2; Bacteria - 722; Metazoa - 0; Fungi - 281; Plants - 703; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|47932 : 222.0) no description available & (reliability: 968.0) & (original description: Putative PGSC0003DMG400018142, Description = Pectate lyase, PFAM = PF00544;PF04431)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf02145_822168-826007' '(at4g22080 : 561.0) root hair specific 14 (RHS14); FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root hair; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G22090.1); Has 1685 Blast hits to 1680 proteins in 281 species: Archae - 2; Bacteria - 749; Metazoa - 0; Fungi - 223; Plants - 700; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (p40973|pel_lillo : 379.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 227.0) no description available & (reliability: 1122.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf02170_329751-369463' '(at1g11920 : 368.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: root hair specific 14 (TAIR:AT4G22080.1); Has 1675 Blast hits to 1668 proteins in 273 species: Archae - 0; Bacteria - 759; Metazoa - 0; Fungi - 209; Plants - 697; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (p40973|pel_lillo : 263.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 171.0) no description available & (reliability: 736.0) & (original description: Putative B12, Description = Pectate lyase, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf02190_1288-9045' '(p48979|pglr_prupe : 451.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (at3g59850 : 446.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G43870.1); Has 4315 Blast hits to 4302 proteins in 546 species: Archae - 4; Bacteria - 1265; Metazoa - 14; Fungi - 1413; Plants - 1493; Viruses - 2; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|84675 : 278.0) no description available & (reliability: 892.0) & (original description: Putative At2g43860, Description = Probable polygalacturonase At2g43860, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf02190_69906-74770' '(at2g43880 : 472.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G43890.1); Has 4195 Blast hits to 4175 proteins in 547 species: Archae - 4; Bacteria - 1296; Metazoa - 14; Fungi - 1271; Plants - 1481; Viruses - 2; Other Eukaryotes - 127 (source: NCBI BLink). & (p48979|pglr_prupe : 393.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (gnl|cdd|84675 : 264.0) no description available & (reliability: 944.0) & (original description: Putative G9, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf02190_168330-171803' '(at2g43880 : 469.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G43890.1); Has 4195 Blast hits to 4175 proteins in 547 species: Archae - 4; Bacteria - 1296; Metazoa - 14; Fungi - 1271; Plants - 1481; Viruses - 2; Other Eukaryotes - 127 (source: NCBI BLink). & (p48979|pglr_prupe : 387.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (gnl|cdd|84675 : 270.0) no description available & (reliability: 938.0) & (original description: Putative MPG1, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf02253_570400-573783' '(p40972|pel_tobac : 778.0) Pectate lyase precursor (EC 4.2.2.2) - Nicotiana tabacum (Common tobacco) & (at1g14420 : 432.0) AT59; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: plant-type cell wall organization; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectate lyase, N-terminal (InterPro:IPR007524), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT2G02720.1); Has 1736 Blast hits to 1725 proteins in 285 species: Archae - 2; Bacteria - 722; Metazoa - 0; Fungi - 281; Plants - 703; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|47932 : 217.0) no description available & (reliability: 864.0) & (original description: Putative AT59, Description = Pectate lyase, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf02615_173549-181372' '(at1g09890 : 884.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09910.1); Has 301 Blast hits to 285 proteins in 64 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 84; Plants - 166; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69561 : 295.0) no description available & (reliability: 1768.0) & (original description: Putative BnaA06g05810D, Description = BnaA06g05810D protein, PFAM = PF14686;PF14683;PF06045)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf02646_432297-436840' '(p48979|pglr_prupe : 521.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (at3g59850 : 483.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G43870.1); Has 4315 Blast hits to 4302 proteins in 546 species: Archae - 4; Bacteria - 1265; Metazoa - 14; Fungi - 1413; Plants - 1493; Viruses - 2; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|84675 : 257.0) no description available & (reliability: 966.0) & (original description: Putative MPG1, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf02724_67181-77315' '(at4g33440 : 624.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G62110.1); Has 4317 Blast hits to 4300 proteins in 507 species: Archae - 6; Bacteria - 1547; Metazoa - 14; Fungi - 1180; Plants - 1416; Viruses - 2; Other Eukaryotes - 152 (source: NCBI BLink). & (gnl|cdd|34993 : 208.0) no description available & (p35336|pglr_actch : 99.8) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (reliability: 1248.0) & (original description: Putative GSVIVT00026920001, Description = Probable polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf02774_392549-405495' '(at2g22620 : 696.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT4G37950.1). & (gnl|cdd|69561 : 161.0) no description available & (reliability: 1392.0) & (original description: Putative At2g22620, Description = Rhamnogalacturonate lyase-like protein, PFAM = PF06045;PF14683;PF14686)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf02819_578490-583129' '(at1g17150 : 286.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G43080.1); Has 3925 Blast hits to 3904 proteins in 469 species: Archae - 4; Bacteria - 1051; Metazoa - 14; Fungi - 1254; Plants - 1494; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (q39786|pglr_goshi : 251.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Gossypium hirsutum (Upland cotton) & (gnl|cdd|84675 : 233.0) no description available & (reliability: 572.0) & (original description: Putative plaa2, Description = Polygalacturonase, PFAM = PF00295;PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf02949_269456-274640' '(at1g67750 : 667.0) Pectate lyase family protein; FUNCTIONS IN: pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G63180.1); Has 1739 Blast hits to 1731 proteins in 272 species: Archae - 0; Bacteria - 767; Metazoa - 0; Fungi - 258; Plants - 701; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p40973|pel_lillo : 421.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 230.0) no description available & (reliability: 1334.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf03045_567925-572517' '(at1g23460 : 595.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626), Glycoside hydrolase, family 28 (InterPro:IPR000743); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G70500.1); Has 4300 Blast hits to 4283 proteins in 531 species: Archae - 4; Bacteria - 1235; Metazoa - 14; Fungi - 1418; Plants - 1493; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (p35336|pglr_actch : 350.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 292.0) no description available & (reliability: 1190.0) & (original description: Putative pga, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf03264_561697-566636' '(p35336|pglr_actch : 420.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (at3g07970 : 392.0) Required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation.; QUARTET 2 (QRT2); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G57510.1); Has 4184 Blast hits to 4170 proteins in 494 species: Archae - 6; Bacteria - 1270; Metazoa - 14; Fungi - 1271; Plants - 1492; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|84675 : 300.0) no description available & (reliability: 784.0) & (original description: Putative QRT2, Description = Polygalacturonase QRT2, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf03284_832626-841909' '(at1g60590 : 535.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G10640.1); Has 4525 Blast hits to 4468 proteins in 546 species: Archae - 6; Bacteria - 1298; Metazoa - 151; Fungi - 1295; Plants - 1596; Viruses - 3; Other Eukaryotes - 176 (source: NCBI BLink). & (p35336|pglr_actch : 292.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 256.0) no description available & (reliability: 1070.0) & (original description: Putative At1g48100, Description = Polygalacturonase At1g48100, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf03362_596455-602905' '(at3g26610 : 538.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G60590.1); Has 4342 Blast hits to 4315 proteins in 504 species: Archae - 6; Bacteria - 1404; Metazoa - 14; Fungi - 1284; Plants - 1492; Viruses - 2; Other Eukaryotes - 140 (source: NCBI BLink). & (gnl|cdd|84675 : 249.0) no description available & (p35336|pglr_actch : 247.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (reliability: 1076.0) & (original description: Putative At3g26610, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf03437_324783-333718' '(at1g19170 : 686.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Parallel beta-helix repeat (InterPro:IPR006626), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G42950.1); Has 4384 Blast hits to 4371 proteins in 509 species: Archae - 6; Bacteria - 1552; Metazoa - 14; Fungi - 1224; Plants - 1428; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|34993 : 225.0) no description available & (q39786|pglr_goshi : 100.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Gossypium hirsutum (Upland cotton) & (reliability: 1372.0) & (original description: Putative GSVIVT00026920001, Description = Probable polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf03444_146712-150822' '(at5g63180 : 622.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G24780.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p40973|pel_lillo : 401.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 234.0) no description available & (reliability: 1244.0) & (original description: Putative 9612, Description = Probable pectate lyase P18, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf03624_799262-807847' '(at1g09890 : 822.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09910.1); Has 301 Blast hits to 285 proteins in 64 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 84; Plants - 166; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69561 : 250.0) no description available & (reliability: 1644.0) & (original description: Putative BnaA06g05820D, Description = BnaA06g05820D protein, PFAM = PF14686;PF14683;PF06045)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf03624_799310-806511' '(at1g09890 : 823.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09910.1); Has 301 Blast hits to 285 proteins in 64 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 84; Plants - 166; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69561 : 245.0) no description available & (reliability: 1646.0) & (original description: Putative BnaA06g05820D, Description = BnaA06g05820D protein, PFAM = PF14683;PF06045;PF14686)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf03706_268302-273149' '(at3g16850 : 536.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G06770.2); Has 3152 Blast hits to 3138 proteins in 427 species: Archae - 6; Bacteria - 1355; Metazoa - 8; Fungi - 358; Plants - 1330; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|34993 : 182.0) no description available & (p48979|pglr_prupe : 85.9) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (reliability: 1072.0) & (original description: Putative At3g16850, Description = Pectin lyase-like superfamily protein, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf03930_266615-271503' '(at5g17200 : 290.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sperm cell, sepal, flower, pedicel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G15720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p48978|pglr_maldo : 248.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|84675 : 243.0) no description available & (reliability: 580.0) & (original description: Putative At3g15720, Description = Probable polygalacturonase At3g15720, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf03930_377328-383197' '(at1g80170 : 510.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G70500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35336|pglr_actch : 366.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 298.0) no description available & (reliability: 1020.0) & (original description: Putative pgaz, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf03985_559803-566173' '(at4g23820 : 636.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G41870.1); Has 4183 Blast hits to 4168 proteins in 506 species: Archae - 6; Bacteria - 1472; Metazoa - 14; Fungi - 1146; Plants - 1414; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|34993 : 196.0) no description available & (p35338|pglr2_maize : 90.5) Exopolygalacturonase precursor (EC 3.2.1.67) (ExoPG) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) - Zea mays (Maize) & (reliability: 1272.0) & (original description: Putative BnaA03g46290D, Description = BnaA03g46290D protein, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf04362_44942-52479' '(at5g04310 : 608.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G54920.1); Has 1753 Blast hits to 1747 proteins in 285 species: Archae - 0; Bacteria - 762; Metazoa - 0; Fungi - 280; Plants - 694; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (p40973|pel_lillo : 414.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 223.0) no description available & (reliability: 1216.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf04407_223475-228361' '(at3g15720 : 298.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: response to cyclopentenone, carbohydrate metabolic process; LOCATED IN: anchored to membrane, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G27530.1); Has 4574 Blast hits to 4550 proteins in 589 species: Archae - 6; Bacteria - 1461; Metazoa - 14; Fungi - 1454; Plants - 1502; Viruses - 2; Other Eukaryotes - 135 (source: NCBI BLink). & (p35336|pglr_actch : 269.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 253.0) no description available & (reliability: 596.0) & (original description: Putative pgaz, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf04777_264880-274630' '(at1g09910 : 712.0) Rhamnogalacturonate lyase family protein; FUNCTIONS IN: lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09890.1); Has 300 Blast hits to 279 proteins in 59 species: Archae - 0; Bacteria - 45; Metazoa - 0; Fungi - 84; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69561 : 221.0) no description available & (reliability: 1424.0) & (original description: Putative BnaC05g07390D, Description = BnaC05g07390D protein, PFAM = PF06045;PF14683;PF14686)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf04777_279671-298906' '(at2g22620 : 695.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT4G37950.1). & (gnl|cdd|69561 : 173.0) no description available & (reliability: 1390.0) & (original description: Putative Os08g0554300, Description = Os08g0554300 protein, PFAM = PF06045;PF14686;PF14683)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf04777_550152-563247' '(at2g22620 : 710.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT4G37950.1). & (gnl|cdd|69561 : 220.0) no description available & (reliability: 1420.0) & (original description: Putative At2g22620, Description = Putative uncharacterized protein At2g22620, PFAM = PF14683;PF06045;PF14686)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf05514_53972-63875' '(at2g22620 : 683.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT4G37950.1). & (gnl|cdd|69561 : 198.0) no description available & (reliability: 1366.0) & (original description: Putative BnaC08g34880D, Description = BnaC08g34880D protein, PFAM = PF06045;PF14683;PF14686)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf06023_378439-390386' '(at3g57790 : 566.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G42950.1); Has 3246 Blast hits to 3240 proteins in 468 species: Archae - 6; Bacteria - 1493; Metazoa - 3; Fungi - 347; Plants - 1297; Viruses - 2; Other Eukaryotes - 98 (source: NCBI BLink). & (gnl|cdd|34993 : 172.0) no description available & (reliability: 1132.0) & (original description: Putative Sb02g028280, Description = Putative uncharacterized protein Sb02g028280, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf06164_115056-119097' '(at1g23760 : 648.0) Encodes aromatic rich glycoprotein JP630.; JP630; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: polygalacturonase 2 (TAIR:AT1G70370.2); Has 1783 Blast hits to 1423 proteins in 248 species: Archae - 0; Bacteria - 362; Metazoa - 287; Fungi - 197; Plants - 556; Viruses - 4; Other Eukaryotes - 377 (source: NCBI BLink). & (gnl|cdd|66831 : 266.0) no description available & (reliability: 1296.0) & (original description: Putative PGL3, Description = Polygalacturonase 1 beta-like protein 3, PFAM = PF03181)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf06172_29221-34156' '(at1g14420 : 486.0) AT59; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: plant-type cell wall organization; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectate lyase, N-terminal (InterPro:IPR007524), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT2G02720.1); Has 1736 Blast hits to 1725 proteins in 285 species: Archae - 2; Bacteria - 722; Metazoa - 0; Fungi - 281; Plants - 703; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (p40973|pel_lillo : 452.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 234.0) no description available & (reliability: 972.0) & (original description: Putative LAT59, Description = Probable pectate lyase P59, PFAM = PF04431;PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf06347_201762-208242' '(at3g07970 : 299.0) Required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation.; QUARTET 2 (QRT2); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G57510.1); Has 4184 Blast hits to 4170 proteins in 494 species: Archae - 6; Bacteria - 1270; Metazoa - 14; Fungi - 1271; Plants - 1492; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (p48978|pglr_maldo : 273.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|84675 : 242.0) no description available & (reliability: 598.0) & (original description: Putative MPG3, Description = Polygalacturonase, PFAM = PF00295;PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf06437_469713-473928' '(at3g53190 : 499.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G04310.1); Has 1735 Blast hits to 1728 proteins in 275 species: Archae - 0; Bacteria - 778; Metazoa - 0; Fungi - 236; Plants - 699; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (p40973|pel_lillo : 360.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 222.0) no description available & (reliability: 998.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf06663_60070-78167' '(at2g22620 : 694.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT4G37950.1). & (gnl|cdd|69561 : 233.0) no description available & (reliability: 1388.0) & (original description: Putative PGSC0003DMG400015675, Description = Rhamnogalacturonate lyase B-like protein, PFAM = PF14686;PF06045;PF14683)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf06663_68940-76760' '(at2g22620 : 603.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT4G37950.1). & (gnl|cdd|69561 : 233.0) no description available & (reliability: 1206.0) & (original description: Putative At1g09880, Description = Rhamnogalacturonate lyase, PFAM = PF14686;PF14683;PF06045)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf06663_111396-127744' '(at2g22620 : 759.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT4G37950.1). & (gnl|cdd|69561 : 246.0) no description available & (reliability: 1518.0) & (original description: Putative At2g22620, Description = Putative uncharacterized protein At2g22620, PFAM = PF06045;PF14686;PF14683)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf06999_178585-185180' '(at3g53190 : 617.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G04310.1); Has 1735 Blast hits to 1728 proteins in 275 species: Archae - 0; Bacteria - 778; Metazoa - 0; Fungi - 236; Plants - 699; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (p40973|pel_lillo : 384.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 224.0) no description available & (reliability: 1234.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf07323_61332-67008' '(at1g23460 : 555.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626), Glycoside hydrolase, family 28 (InterPro:IPR000743); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G70500.1); Has 4300 Blast hits to 4283 proteins in 531 species: Archae - 4; Bacteria - 1235; Metazoa - 14; Fungi - 1418; Plants - 1493; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (p35336|pglr_actch : 328.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 280.0) no description available & (reliability: 1110.0) & (original description: Putative pga, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf07382_138231-152299' '(at1g80170 : 459.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G70500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35336|pglr_actch : 344.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 286.0) no description available & (reliability: 918.0) & (original description: Putative pga, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf07402_735583-748126' '(gnl|cdd|69561 : 184.0) no description available & (at2g22620 : 150.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT4G37950.1). & (reliability: 300.0) & (original description: Putative Ccrd_012996, Description = Rhamnogalacturonate lyase, PFAM = PF06045)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf07511_421176-439114' '(at1g09910 : 743.0) Rhamnogalacturonate lyase family protein; FUNCTIONS IN: lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09890.1); Has 300 Blast hits to 279 proteins in 59 species: Archae - 0; Bacteria - 45; Metazoa - 0; Fungi - 84; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69561 : 248.0) no description available & (reliability: 1486.0) & (original description: Putative PGSC0003DMG400014600, Description = Rhamnogalacturonate lyase, PFAM = PF06045;PF14683;PF14686)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf07576_499977-504850' '(at3g61490 : 707.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G23500.1). & (gnl|cdd|34993 : 190.0) no description available & (p35338|pglr2_maize : 99.0) Exopolygalacturonase precursor (EC 3.2.1.67) (ExoPG) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) - Zea mays (Maize) & (reliability: 1414.0) & (original description: Putative LOC100284735, Description = Glycoside hydrolase, family 28, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf07829_109747-115359' '(at1g80170 : 509.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G70500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35336|pglr_actch : 363.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 297.0) no description available & (reliability: 1018.0) & (original description: Putative pgaz, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf08637_34794-38899' '(at1g70370 : 742.0) polygalacturonase 2 (PG2); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: BURP domain-containing protein (TAIR:AT1G23760.1). & (gnl|cdd|66831 : 289.0) no description available & (reliability: 1484.0) & (original description: Putative GP1, Description = Polygalacturonase-1 non-catalytic subunit beta, PFAM = PF03181)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf09260_107478-113717' '(at1g48100 : 653.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G02460.1); Has 4526 Blast hits to 4502 proteins in 576 species: Archae - 8; Bacteria - 1381; Metazoa - 30; Fungi - 1439; Plants - 1518; Viruses - 5; Other Eukaryotes - 145 (source: NCBI BLink). & (p35336|pglr_actch : 284.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 252.0) no description available & (reliability: 1306.0) & (original description: Putative At1g48100, Description = Polygalacturonase At1g48100, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf09438_46802-50495' '(p48979|pglr_prupe : 482.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (at2g43870 : 480.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G59850.1); Has 4109 Blast hits to 4094 proteins in 490 species: Archae - 4; Bacteria - 1205; Metazoa - 14; Fungi - 1270; Plants - 1494; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|84675 : 267.0) no description available & (reliability: 960.0) & (original description: Putative At2g43860, Description = Probable polygalacturonase At2g43860, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf09684_122022-126754' '(at2g33160 : 408.0) glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein; FUNCTIONS IN: polygalacturonase activity, nucleic acid binding; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G43080.1); Has 4055 Blast hits to 4034 proteins in 453 species: Archae - 8; Bacteria - 853; Metazoa - 14; Fungi - 1250; Plants - 1822; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (q39786|pglr_goshi : 333.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Gossypium hirsutum (Upland cotton) & (gnl|cdd|84675 : 278.0) no description available & (reliability: 816.0) & (original description: Putative plaa2, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf09698_179133-186619' '(p35336|pglr_actch : 502.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (at2g41850 : 409.0) ADPG2.; polygalacturonase abscission zone A. thaliana (PGAZAT); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: cell wall modification involved in abscission, fruit dehiscence, floral organ abscission, anther dehiscence, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G57510.1); Has 4465 Blast hits to 4447 proteins in 569 species: Archae - 8; Bacteria - 1510; Metazoa - 14; Fungi - 1290; Plants - 1500; Viruses - 5; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|84675 : 338.0) no description available & (reliability: 818.0) & (original description: Putative pga, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf10058_5335-40988' '(p35336|pglr_actch : 419.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (at3g07970 : 395.0) Required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation.; QUARTET 2 (QRT2); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G57510.1); Has 4184 Blast hits to 4170 proteins in 494 species: Archae - 6; Bacteria - 1270; Metazoa - 14; Fungi - 1271; Plants - 1492; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|84675 : 302.0) no description available & (reliability: 790.0) & (original description: Putative pga, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf10747_21241-28301' '(at3g55140 : 583.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G09540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47932 : 206.0) no description available & (p40972|pel_tobac : 156.0) Pectate lyase precursor (EC 4.2.2.2) - Nicotiana tabacum (Common tobacco) & (reliability: 1166.0) & (original description: Putative PL4, Description = Pectate lyase, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf12321_113202-118869' '(q05967|pglr_tobac : 542.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Nicotiana tabacum (Common tobacco) & (at3g07820 : 379.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G07830.1); Has 3636 Blast hits to 3621 proteins in 442 species: Archae - 6; Bacteria - 812; Metazoa - 14; Fungi - 1257; Plants - 1440; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|84675 : 333.0) no description available & (reliability: 758.0) & (original description: Putative PG1, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf12321_119225-126116' '(q05967|pglr_tobac : 680.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84675 : 374.0) no description available & (at3g07820 : 370.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G07830.1); Has 3636 Blast hits to 3621 proteins in 442 species: Archae - 6; Bacteria - 812; Metazoa - 14; Fungi - 1257; Plants - 1440; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 740.0) & (original description: Putative PG1, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf12680_125103-291029' '(at1g67750 : 639.0) Pectate lyase family protein; FUNCTIONS IN: pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G63180.1); Has 1739 Blast hits to 1731 proteins in 272 species: Archae - 0; Bacteria - 767; Metazoa - 0; Fungi - 258; Plants - 701; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p40973|pel_lillo : 416.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 231.0) no description available & (reliability: 1278.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf12708_102150-106539' '(p48979|pglr_prupe : 463.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (at2g43870 : 449.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G59850.1); Has 4109 Blast hits to 4094 proteins in 490 species: Archae - 4; Bacteria - 1205; Metazoa - 14; Fungi - 1270; Plants - 1494; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|84675 : 262.0) no description available & (reliability: 898.0) & (original description: Putative MPG1, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf12708_166316-170499' '(at2g43880 : 454.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G43890.1); Has 4195 Blast hits to 4175 proteins in 547 species: Archae - 4; Bacteria - 1296; Metazoa - 14; Fungi - 1271; Plants - 1481; Viruses - 2; Other Eukaryotes - 127 (source: NCBI BLink). & (p48979|pglr_prupe : 375.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (gnl|cdd|84675 : 279.0) no description available & (reliability: 908.0) & (original description: Putative BnaC04g49340D, Description = BnaC04g49340D protein, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf12976_67430-72364' '(at1g17150 : 302.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G43080.1); Has 3925 Blast hits to 3904 proteins in 469 species: Archae - 4; Bacteria - 1051; Metazoa - 14; Fungi - 1254; Plants - 1494; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (q39786|pglr_goshi : 291.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Gossypium hirsutum (Upland cotton) & (gnl|cdd|84675 : 273.0) no description available & (reliability: 604.0) & (original description: Putative PG2C, Description = Exopolygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf13268_101696-110051' '(at3g55140 : 490.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G09540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47932 : 202.0) no description available & (p40972|pel_tobac : 142.0) Pectate lyase precursor (EC 4.2.2.2) - Nicotiana tabacum (Common tobacco) & (reliability: 980.0) & (original description: Putative PL4, Description = Pectate lyase, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf13411_575763-586542' '(q05967|pglr_tobac : 537.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Nicotiana tabacum (Common tobacco) & (at3g07820 : 375.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G07830.1); Has 3636 Blast hits to 3621 proteins in 442 species: Archae - 6; Bacteria - 812; Metazoa - 14; Fungi - 1257; Plants - 1440; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|84675 : 344.0) no description available & (reliability: 750.0) & (original description: Putative PG1, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf14344_387-12764' '(at3g57790 : 577.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G42950.1); Has 3246 Blast hits to 3240 proteins in 468 species: Archae - 6; Bacteria - 1493; Metazoa - 3; Fungi - 347; Plants - 1297; Viruses - 2; Other Eukaryotes - 98 (source: NCBI BLink). & (gnl|cdd|34993 : 167.0) no description available & (reliability: 1154.0) & (original description: Putative At3g57790, Description = Pectin lyase-like superfamily protein, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf14768_46139-50280' '(at4g24780 : 633.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G63180.1). & (p40973|pel_lillo : 405.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|47932 : 234.0) no description available & (reliability: 1266.0) & (original description: Putative pel2, Description = Pectate lyase, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf15310_16925-22655' '(at4g18180 : 301.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G07840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q39786|pglr_goshi : 262.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Gossypium hirsutum (Upland cotton) & (gnl|cdd|84675 : 261.0) no description available & (reliability: 602.0) & (original description: Putative plaa2, Description = Polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf16657_13794-22831' '(at3g42950 : 755.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G19170.1); Has 4385 Blast hits to 4369 proteins in 520 species: Archae - 6; Bacteria - 1604; Metazoa - 14; Fungi - 1181; Plants - 1422; Viruses - 0; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|34993 : 226.0) no description available & (p35339|pglr3_maize : 94.7) Exopolygalacturonase precursor (EC 3.2.1.67) (ExoPG) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) - Zea mays (Maize) & (reliability: 1510.0) & (original description: Putative GSVIVT00026920001, Description = Probable polygalacturonase, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf18696_62453-66161' '(p40972|pel_tobac : 558.0) Pectate lyase precursor (EC 4.2.2.2) - Nicotiana tabacum (Common tobacco) & (at3g01270 : 427.0) Pectate lyase family protein; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectate lyase, N-terminal (InterPro:IPR007524), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT5G15110.1); Has 1587 Blast hits to 1580 proteins in 266 species: Archae - 0; Bacteria - 700; Metazoa - 0; Fungi - 174; Plants - 701; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|47932 : 209.0) no description available & (reliability: 854.0) & (original description: Putative AT59, Description = Pectate lyase, PFAM = PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf18696_80328-85176' '(at1g14420 : 456.0) AT59; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: plant-type cell wall organization; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectate lyase, N-terminal (InterPro:IPR007524), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT2G02720.1); Has 1736 Blast hits to 1725 proteins in 285 species: Archae - 2; Bacteria - 722; Metazoa - 0; Fungi - 281; Plants - 703; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (p40972|pel_tobac : 405.0) Pectate lyase precursor (EC 4.2.2.2) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47932 : 229.0) no description available & (reliability: 912.0) & (original description: Putative LAT59, Description = Probable pectate lyase P59, PFAM = PF00544;PF04431)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf19421_53768-58399' '(p40973|pel_lillo : 440.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (at1g14420 : 433.0) AT59; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: plant-type cell wall organization; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectate lyase, N-terminal (InterPro:IPR007524), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT2G02720.1); Has 1736 Blast hits to 1725 proteins in 285 species: Archae - 2; Bacteria - 722; Metazoa - 0; Fungi - 281; Plants - 703; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|47932 : 212.0) no description available & (reliability: 866.0) & (original description: Putative AT59, Description = Probable pectate lyase 3, PFAM = PF04431;PF00544)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf28267_35086-44112' '(at3g15720 : 327.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: response to cyclopentenone, carbohydrate metabolic process; LOCATED IN: anchored to membrane, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G27530.1); Has 4574 Blast hits to 4550 proteins in 589 species: Archae - 6; Bacteria - 1461; Metazoa - 14; Fungi - 1454; Plants - 1502; Viruses - 2; Other Eukaryotes - 135 (source: NCBI BLink). & (p35336|pglr_actch : 279.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|84675 : 265.0) no description available & (reliability: 654.0) & (original description: Putative At3g15720, Description = Probable polygalacturonase At3g15720, PFAM = PF00295)' T '10.6.3' 'cell wall.degradation.pectate lyases and polygalacturonases' 'niben101scf28780_197832-200019' '(at5g06860 : 394.0) Encodes a polygalacturonase inhibiting protein involved in defense response. PGIPs inhibit the function of cell wall pectin degrading enzymes such as those produced by fungal pathogens. PGIP1 is induced by fungal infection.; polygalacturonase inhibiting protein 1 (PGIP1); FUNCTIONS IN: polygalacturonase inhibitor activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: polygalacturonase inhibiting protein 2 (TAIR:AT5G06870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p58822|pgip2_phavu : 304.0) Polygalacturonase inhibitor 2 precursor (Polygalacturonase-inhibiting protein) (PGIP-2) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|35838 : 81.6) no description available & (reliability: 788.0) & (original description: Putative pgip, Description = Polygalacturonase inhibitor, PFAM = PF13855;PF00560;PF08263)' T '10.6.1001' 'cell wall.degradation' '1,6-anhydroglucose' 'very tentative' M '10.7' 'cell wall.modification' 'nbv0.3scaffold358_23294-48534' '(at4g30380 : 144.0) Encodes a Plant Natriuretic Peptide (PNP). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive.; Barwin-related endoglucanase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: plant natriuretic peptide A (TAIR:AT2G18660.1); Has 507 Blast hits to 506 proteins in 104 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi - 44; Plants - 427; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative EGC1, Description = Putative EG45-like domain containing protein 1, PFAM = PF03330)' T '10.7' 'cell wall.modification' 'nbv0.3scaffold5512_29607-32859' '(q7xwu8|expa1_orysa : 360.0) Expansin-A1 precursor (OsEXPA1) (Alpha-expansin-1) (OsEXP1) (OsaEXPa1.16) (RiExA) - Oryza sativa (Rice) & (at1g20190 : 353.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin 11 (EXPA11); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A1 (TAIR:AT1G69530.4); Has 2193 Blast hits to 2189 proteins in 161 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 64; Plants - 2080; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|85405 : 98.7) no description available & (reliability: 706.0) & (original description: Putative exp1, Description = Expansin, PFAM = PF03330;PF01357)' T '10.7' 'cell wall.modification' 'nbv0.3scaffold6251_31724-34904' '(at5g39280 : 321.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin A23 (EXPA23); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: extracellular region; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A25 (TAIR:AT5G39300.1); Has 2151 Blast hits to 2148 proteins in 159 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 33; Plants - 2075; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (q40636|expa2_orysa : 275.0) Expansin-A2 precursor (OsEXPA2) (Alpha-expansin-2) (OsEXP2) (OsaEXPa1.23) (RiExB) (RiExC) - Oryza sativa (Rice) & (gnl|cdd|86296 : 92.6) no description available & (reliability: 642.0) & (original description: Putative EXPA25, Description = Expansin-A25, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'nbv0.3scaffold11786_38753-43467' '(at2g37640 : 416.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; EXP3; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A4 (TAIR:AT2G39700.1); Has 2147 Blast hits to 2144 proteins in 153 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 34; Plants - 2079; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (q852a1|expa7_orysa : 383.0) Expansin-A7 precursor (OsEXPA7) (Alpha-expansin-7) (OsEXP7) (OsaEXPa1.26) - Oryza sativa (Rice) & (gnl|cdd|85405 : 98.0) no description available & (reliability: 832.0) & (original description: Putative EXPA3, Description = Expansin-A3, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'nbv0.3scaffold15657_4095-6701' '(q7xt40|exb15_orysa : 152.0) Expansin-B15 precursor (OsEXPB15) (Beta-expansin-15) (OsaEXPb1.16) - Oryza sativa (Rice) & (at1g65680 : 149.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B2 (EXPB2); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B4 (TAIR:AT2G45110.1); Has 2190 Blast hits to 2184 proteins in 158 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 26; Plants - 2110; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative cim1, Description = Putative expansin-B2, PFAM = PF01357)' T '10.7' 'cell wall.modification' 'nbv0.3scaffold25745_22983-28324' '(at5g13870 : 388.0) EXGT-A4, endoxyloglucan transferase,; xyloglucan endotransglucosylase/hydrolase 5 (XTH5); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 4 (TAIR:AT2G06850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q39857|xth_soybn : 385.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) (Fragment) - Glycine max (Soybean) & (gnl|cdd|29536 : 288.0) no description available & (reliability: 776.0) & (original description: Putative PsEXT6, Description = Xyloglucan endotransglucosylase, PFAM = PF00722;PF06955)' T '10.7' 'cell wall.modification' 'nbv0.3scaffold26285_431-4435' '(at5g57550 : 373.0) xyloglucan endotransglycosylase-related protein (XTR3); xyloglucan endotransglucosylase/hydrolase 25 (XTH25); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35694|bru1_soybn : 356.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 331.0) no description available & (reliability: 746.0) & (original description: Putative XTH16, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 16, PFAM = PF00722;PF06955)' T '10.7' 'cell wall.modification' 'nbv0.3scaffold32129_17951-23639' '(at1g32170 : 405.0) xyloglucan endotransglycosylase-related protein (XTR4); xyloglucan endotransglucosylase/hydrolase 30 (XTH30); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 29 (TAIR:AT4G18990.1); Has 2058 Blast hits to 2046 proteins in 299 species: Archae - 2; Bacteria - 244; Metazoa - 0; Fungi - 398; Plants - 1344; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|29536 : 257.0) no description available & (p93349|xth_tobac : 188.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 810.0) & (original description: Putative XTH30, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 30, PFAM = PF00722;PF06955)' T '10.7' 'cell wall.modification' 'nbv0.3scaffold32749_1386-6662' '(at2g37640 : 352.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; EXP3; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A4 (TAIR:AT2G39700.1); Has 2147 Blast hits to 2144 proteins in 153 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 34; Plants - 2079; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (q852a1|expa7_orysa : 340.0) Expansin-A7 precursor (OsEXPA7) (Alpha-expansin-7) (OsEXP7) (OsaEXPa1.26) - Oryza sativa (Rice) & (gnl|cdd|86296 : 83.7) no description available & (reliability: 704.0) & (original description: Putative exp1, Description = Expansin, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'nbv0.3scaffold39512_32116-35800' '(at3g44990 : 374.0) xyloglucan endo-transglycosylase; xyloglucan endo-transglycosylase-related 8 (XTR8); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: cell wall biogenesis; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 32 (TAIR:AT2G36870.1); Has 1950 Blast hits to 1931 proteins in 270 species: Archae - 2; Bacteria - 210; Metazoa - 0; Fungi - 320; Plants - 1353; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|29536 : 272.0) no description available & (p93349|xth_tobac : 184.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 748.0) & (original description: Putative XTH32, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 32, PFAM = PF00722;PF06955)' T '10.7' 'cell wall.modification' 'nbv0.3scaffold42617_5200-9426' '(at5g57550 : 391.0) xyloglucan endotransglycosylase-related protein (XTR3); xyloglucan endotransglucosylase/hydrolase 25 (XTH25); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35694|bru1_soybn : 369.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 327.0) no description available & (reliability: 782.0) & (original description: Putative XTH23, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 23, PFAM = PF00722;PF06955)' T '10.7' 'cell wall.modification' 'nbv0.3scaffold102365_218-3490' '(at4g25810 : 395.0) xyloglucan endotransglycosylase-related protein (XTR6); xyloglucan endotransglycosylase 6 (XTR6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein (TAIR:AT5G57560.1); Has 2255 Blast hits to 2235 proteins in 316 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 455; Plants - 1384; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (p35694|bru1_soybn : 389.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 335.0) no description available & (reliability: 790.0) & (original description: Putative xth2, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'nbv0.5scaffold87_434357-437168' '(at2g14620 : 138.0) xyloglucan endotransglucosylase/hydrolase 10 (XTH10); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 7 (TAIR:AT4G37800.1); Has 2030 Blast hits to 2016 proteins in 268 species: Archae - 0; Bacteria - 182; Metazoa - 0; Fungi - 404; Plants - 1378; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|29536 : 126.0) no description available & (p35694|bru1_soybn : 96.7) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (reliability: 276.0) & (original description: Putative XTH1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'nbv0.5scaffold1672_219756-223251' '(at2g18660 : 86.7) Encodes PNP-A (Plant Natriuretic Peptide A). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive. PNP-A contains a signal peptide domain and is secreted into the extracellular space. Co-expression analyses using microarray data suggest that PNP-A may function as a component of plant defence response and SAR in particular, and could be classified as a newly identified PR protein.; plant natriuretic peptide A (PNP-A); LOCATED IN: extracellular region, cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: Barwin-related endoglucanase (TAIR:AT4G30380.1); Has 232 Blast hits to 231 proteins in 52 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 6; Plants - 214; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative Ave1, Description = Avirulent on Ve1, PFAM = PF03330)' T '10.7' 'cell wall.modification' 'nbv0.5scaffold2491_141039-144342' '(p93349|xth_tobac : 553.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (at5g13870 : 435.0) EXGT-A4, endoxyloglucan transferase,; xyloglucan endotransglucosylase/hydrolase 5 (XTH5); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 4 (TAIR:AT2G06850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29536 : 320.0) no description available & (reliability: 870.0) & (original description: Putative TfXTH2, Description = Xyloglucan endotransglycosylase/hydrolase, PFAM = PF00722;PF06955)' T '10.7' 'cell wall.modification' 'nbv0.5scaffold3592_1250-4896' '(p35694|bru1_soybn : 396.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (at4g25810 : 394.0) xyloglucan endotransglycosylase-related protein (XTR6); xyloglucan endotransglycosylase 6 (XTR6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein (TAIR:AT5G57560.1); Has 2255 Blast hits to 2235 proteins in 316 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 455; Plants - 1384; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (gnl|cdd|29536 : 339.0) no description available & (reliability: 788.0) & (original description: Putative XTH23, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 23, PFAM = PF00722;PF06955)' T '10.7' 'cell wall.modification' 'niben044scf00000443ctg007_706-4096' '(q7xwu8|expa1_orysa : 354.0) Expansin-A1 precursor (OsEXPA1) (Alpha-expansin-1) (OsEXP1) (OsaEXPa1.16) (RiExA) - Oryza sativa (Rice) & (at1g20190 : 345.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin 11 (EXPA11); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A1 (TAIR:AT1G69530.4); Has 2193 Blast hits to 2189 proteins in 161 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 64; Plants - 2080; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|85405 : 101.0) no description available & (reliability: 690.0) & (original description: Putative EXPA12, Description = Expansin-A12, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'niben044scf00001344ctg002_4627-8310' '(gnl|cdd|29536 : 173.0) no description available & (at4g13080 : 163.0) xyloglucan endotransglucosylase/hydrolase 1 (XTH1); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 2 (TAIR:AT4G13090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q39857|xth_soybn : 140.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) (Fragment) - Glycine max (Soybean) & (reliability: 326.0) & (original description: Putative xth26, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF00722;PF06955)' T '10.7' 'cell wall.modification' 'niben044scf00002007ctg003_1-2287' '(at1g65680 : 130.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B2 (EXPB2); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B4 (TAIR:AT2G45110.1); Has 2190 Blast hits to 2184 proteins in 158 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 26; Plants - 2110; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (q6h677|exb14_orysa : 124.0) Putative expansin-B14 precursor (OsEXPB14) (Beta-expansin-14) (OsEXPB16) (OsaEXPb1.14) (OsaEXPb1.18) - Oryza sativa (Rice) & (reliability: 260.0) & (original description: Putative cim1, Description = Expansin-like protein B1, PFAM = PF03330)' T '10.7' 'cell wall.modification' 'niben044scf00005020ctg002_1-3217' '(at1g12560 : 331.0) Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Containing a conserved root hair-specific cis-element RHE. Expressed specifically in root hair cell.; expansin A7 (EXPA7); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: sperm cell, root hair, root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A18 (TAIR:AT1G62980.1); Has 2192 Blast hits to 2189 proteins in 166 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 53; Plants - 2083; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (q8w2x8|exp30_orysa : 326.0) Putative expansin-A30 precursor (OsEXPA30) (Alpha-expansin-30) (OsEXP30) (OsaEXPa1.32) - Oryza sativa (Rice) & (gnl|cdd|85405 : 86.0) no description available & (reliability: 662.0) & (original description: Putative EXPA7, Description = Expansin-A7, PFAM = PF03330;PF01357)' T '10.7' 'cell wall.modification' 'niben044scf00008871ctg006_1-2003' '(at4g25810 : 396.0) xyloglucan endotransglycosylase-related protein (XTR6); xyloglucan endotransglycosylase 6 (XTR6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein (TAIR:AT5G57560.1); Has 2255 Blast hits to 2235 proteins in 316 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 455; Plants - 1384; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (p35694|bru1_soybn : 395.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 339.0) no description available & (reliability: 792.0) & (original description: Putative XTH23, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 23, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'niben044scf00008944ctg014_1-2208' '(at4g28850 : 378.0) xyloglucan endotransglucosylase/hydrolase 26 (XTH26); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 16 (TAIR:AT3G23730.1); Has 2230 Blast hits to 2210 proteins in 325 species: Archae - 0; Bacteria - 312; Metazoa - 0; Fungi - 457; Plants - 1370; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|29536 : 304.0) no description available & (q39857|xth_soybn : 262.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) (Fragment) - Glycine max (Soybean) & (reliability: 756.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF00722;PF06955)' T '10.7' 'cell wall.modification' 'niben044scf00011133ctg008_774-5131' '(p35694|bru1_soybn : 435.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (at4g14130 : 415.0) xyloglucan endotransglycosylase-related protein (XTR7); xyloglucan endotransglucosylase/hydrolase 15 (XTH15); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: N-terminal protein myristoylation, carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 16 (TAIR:AT3G23730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29536 : 327.0) no description available & (reliability: 830.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF00722;PF06955)' T '10.7' 'cell wall.modification' 'niben044scf00012858ctg009_139-4077' '(at4g13090 : 246.0) xyloglucan endotransglucosylase/hydrolase 2 (XTH2); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 1 (TAIR:AT4G13080.1); Has 2168 Blast hits to 2148 proteins in 309 species: Archae - 0; Bacteria - 292; Metazoa - 0; Fungi - 434; Plants - 1369; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (q8lnz5|xthb_phaan : 211.0) Probable xyloglucan endotransglucosylase/hydrolase protein B precursor (EC 2.4.1.207) (VaXTH2) - Phaseolus angularis (Adzuki bean) (Vigna angularis) & (gnl|cdd|29536 : 207.0) no description available & (reliability: 492.0) & (original description: Putative xth21, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'niben044scf00014150ctg005_5956-17069' '(at5g39280 : 322.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin A23 (EXPA23); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: extracellular region; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A25 (TAIR:AT5G39300.1); Has 2151 Blast hits to 2148 proteins in 159 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 33; Plants - 2075; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (p93442|expa4_orysa : 270.0) Expansin-A4 precursor (OsEXPA4) (Alpha-expansin-4) (OsEXP4) (OsaEXPa1.22) - Oryza sativa (Rice) & (gnl|cdd|85405 : 92.6) no description available & (reliability: 644.0) & (original description: Putative EXPA25, Description = Expansin-A25, PFAM = PF03330;PF01357)' T '10.7' 'cell wall.modification' 'niben044scf00019839ctg013_2775-9114' '(at2g40610 : 320.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A8 (EXPA8); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, syncytium formation, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A2 (TAIR:AT5G05290.1); Has 2297 Blast hits to 2294 proteins in 186 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 45; Plants - 2187; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (q40636|expa2_orysa : 305.0) Expansin-A2 precursor (OsEXPA2) (Alpha-expansin-2) (OsEXP2) (OsaEXPa1.23) (RiExB) (RiExC) - Oryza sativa (Rice) & (gnl|cdd|85405 : 106.0) no description available & (reliability: 640.0) & (original description: Putative EXPA8, Description = Expansin-A8, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'niben044scf00033546ctg001_16602-19937' '(at1g65680 : 144.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B2 (EXPB2); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B4 (TAIR:AT2G45110.1); Has 2190 Blast hits to 2184 proteins in 158 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 26; Plants - 2110; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (q6h677|exb14_orysa : 140.0) Putative expansin-B14 precursor (OsEXPB14) (Beta-expansin-14) (OsEXPB16) (OsaEXPb1.14) (OsaEXPb1.18) - Oryza sativa (Rice) & (reliability: 288.0) & (original description: Putative cim1, Description = Expansin-like protein B1, PFAM = PF03330)' T '10.7' 'cell wall.modification' 'niben044scf00040433ctg004_14433-22752' '(at4g30380 : 142.0) Encodes a Plant Natriuretic Peptide (PNP). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive.; Barwin-related endoglucanase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: plant natriuretic peptide A (TAIR:AT2G18660.1); Has 507 Blast hits to 506 proteins in 104 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi - 44; Plants - 427; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative EGC1, Description = Putative EG45-like domain containing protein 1, PFAM = PF03330)' T '10.7' 'cell wall.modification' 'niben044scf00044931ctg006_1-2653' '(at3g23730 : 348.0) xyloglucan endotransglucosylase/hydrolase 16 (XTH16); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 15 (TAIR:AT4G14130.1); Has 2187 Blast hits to 2165 proteins in 308 species: Archae - 0; Bacteria - 273; Metazoa - 0; Fungi - 414; Plants - 1389; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|29536 : 327.0) no description available & (p35694|bru1_soybn : 321.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (reliability: 696.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'niben044scf00048158ctg007_1-3311' '(at5g57550 : 351.0) xyloglucan endotransglycosylase-related protein (XTR3); xyloglucan endotransglucosylase/hydrolase 25 (XTH25); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35694|bru1_soybn : 330.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 327.0) no description available & (reliability: 702.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'niben044scf00056847ctg001_456-2756' '(at1g12560 : 333.0) Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Containing a conserved root hair-specific cis-element RHE. Expressed specifically in root hair cell.; expansin A7 (EXPA7); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: sperm cell, root hair, root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A18 (TAIR:AT1G62980.1); Has 2192 Blast hits to 2189 proteins in 166 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 53; Plants - 2083; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (q8w2x8|exp30_orysa : 326.0) Putative expansin-A30 precursor (OsEXPA30) (Alpha-expansin-30) (OsEXP30) (OsaEXPa1.32) - Oryza sativa (Rice) & (gnl|cdd|85405 : 86.0) no description available & (reliability: 666.0) & (original description: Putative EXPA7, Description = Expansin-A7, PFAM = PF03330;PF01357)' T '10.7' 'cell wall.modification' 'niben044scf00059769ctg001_1167-4487' '(at2g03090 : 361.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A15 (EXPA15); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, syncytium formation, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A1 (TAIR:AT1G69530.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93442|expa4_orysa : 317.0) Expansin-A4 precursor (OsEXPA4) (Alpha-expansin-4) (OsEXP4) (OsaEXPa1.22) - Oryza sativa (Rice) & (gnl|cdd|85405 : 112.0) no description available & (reliability: 722.0) & (original description: Putative EXPA1, Description = Expansin-A1, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'niben101ctg13782_1-2126' '(at4g25810 : 394.0) xyloglucan endotransglycosylase-related protein (XTR6); xyloglucan endotransglycosylase 6 (XTR6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein (TAIR:AT5G57560.1); Has 2255 Blast hits to 2235 proteins in 316 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 455; Plants - 1384; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (p35694|bru1_soybn : 388.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 333.0) no description available & (reliability: 788.0) & (original description: Putative XTH23, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 23, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'niben101scf00063_1025822-1030275' '(at2g03090 : 352.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A15 (EXPA15); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, syncytium formation, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A1 (TAIR:AT1G69530.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6zgu9|expa5_orysa : 320.0) Expansin-A5 precursor (OsEXPA5) (Alpha-expansin-5) (OsEXP5) (OsaEXPa1.20) - Oryza sativa (Rice) & (gnl|cdd|85405 : 107.0) no description available & (reliability: 704.0) & (original description: Putative EXPA15, Description = Expansin-A15, PFAM = PF03330;PF01357)' T '10.7' 'cell wall.modification' 'niben101scf00073_104254-107693' '(at1g65680 : 146.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B2 (EXPB2); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B4 (TAIR:AT2G45110.1); Has 2190 Blast hits to 2184 proteins in 158 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 26; Plants - 2110; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (q6h677|exb14_orysa : 144.0) Putative expansin-B14 precursor (OsEXPB14) (Beta-expansin-14) (OsEXPB16) (OsaEXPb1.14) (OsaEXPb1.18) - Oryza sativa (Rice) & (reliability: 292.0) & (original description: Putative expB, Description = Barwin-like endoglucanase, PFAM = PF03330)' T '10.7' 'cell wall.modification' 'niben101scf00103_63371-66535' '(at2g40610 : 284.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A8 (EXPA8); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, syncytium formation, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A2 (TAIR:AT5G05290.1); Has 2297 Blast hits to 2294 proteins in 186 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 45; Plants - 2187; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (p93442|expa4_orysa : 276.0) Expansin-A4 precursor (OsEXPA4) (Alpha-expansin-4) (OsEXP4) (OsaEXPa1.22) - Oryza sativa (Rice) & (gnl|cdd|86296 : 85.3) no description available & (reliability: 568.0) & (original description: Putative exp1, Description = Expansin, PFAM = PF03330;PF01357)' T '10.7' 'cell wall.modification' 'niben101scf00176_923827-928133' '(at1g11545 : 348.0) xyloglucan endotransglucosylase/hydrolase 8 (XTH8); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 7 (TAIR:AT4G37800.1); Has 2134 Blast hits to 2114 proteins in 302 species: Archae - 0; Bacteria - 267; Metazoa - 0; Fungi - 408; Plants - 1375; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (gnl|cdd|29536 : 247.0) no description available & (p93349|xth_tobac : 211.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 696.0) & (original description: Putative xth13, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'niben101scf00369_573002-577299' '(p93349|xth_tobac : 617.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (at5g13870 : 449.0) EXGT-A4, endoxyloglucan transferase,; xyloglucan endotransglucosylase/hydrolase 5 (XTH5); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 4 (TAIR:AT2G06850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29536 : 319.0) no description available & (reliability: 898.0) & (original description: Putative XTH, Description = Probable xyloglucan endotransglucosylase/hydrolase protein, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'niben101scf00397_843851-847750' '(at1g65680 : 293.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B2 (EXPB2); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B4 (TAIR:AT2G45110.1); Has 2190 Blast hits to 2184 proteins in 158 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 26; Plants - 2110; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (q7xt40|exb15_orysa : 290.0) Expansin-B15 precursor (OsEXPB15) (Beta-expansin-15) (OsaEXPb1.16) - Oryza sativa (Rice) & (gnl|cdd|85405 : 99.5) no description available & (reliability: 586.0) & (original description: Putative cim1, Description = Cytokinin induced message, PFAM = PF03330;PF01357)' T '10.7' 'cell wall.modification' 'niben101scf00457_1309948-1313867' '(at2g36870 : 474.0) xyloglucan endotransglucosylase/hydrolase 32 (XTH32); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endo-transglycosylase-related 8 (TAIR:AT3G44990.1). & (gnl|cdd|29536 : 273.0) no description available & (p93349|xth_tobac : 191.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 948.0) & (original description: Putative XTH32, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 32, PFAM = PF00722;PF06955)' T '10.7' 'cell wall.modification' 'niben101scf00490_150743-153927' '(at1g12560 : 333.0) Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Containing a conserved root hair-specific cis-element RHE. Expressed specifically in root hair cell.; expansin A7 (EXPA7); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: sperm cell, root hair, root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A18 (TAIR:AT1G62980.1); Has 2192 Blast hits to 2189 proteins in 166 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 53; Plants - 2083; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (q8w2x8|exp30_orysa : 322.0) Putative expansin-A30 precursor (OsEXPA30) (Alpha-expansin-30) (OsEXP30) (OsaEXPa1.32) - Oryza sativa (Rice) & (gnl|cdd|85405 : 87.9) no description available & (reliability: 666.0) & (original description: Putative EXPA7, Description = Expansin-A7, PFAM = PF03330;PF01357)' T '10.7' 'cell wall.modification' 'niben101scf00526_353203-381348' '(q850k7|exlb1_orysa : 299.0) Expansin-like B1 precursor (OsEXLB1) (Expensin-related 1) (OsEXPR1) (OsaEXPb3.1) - Oryza sativa (Rice) & (at4g17030 : 173.0) Encodes EXLB1 (expansin-like B1), a member of the expansin family.; expansin-like B1 (EXLB1); INVOLVED IN: sexual reproduction, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin-like A2 (TAIR:AT4G38400.1); Has 1869 Blast hits to 1866 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1858; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative EXLB1, Description = Expansin-like B1, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'niben101scf00527_709857-713918' '(at2g45110 : 221.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B4 (EXPB4); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: beta expansin 6 (TAIR:AT1G65681.1); Has 2182 Blast hits to 2179 proteins in 176 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 32; Plants - 2098; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (q6h676|exb11_orysa : 221.0) Expansin-B11 precursor (OsEXPB11) (Beta-expansin-11) (OsaEXPb1.20) - Oryza sativa (Rice) & (gnl|cdd|85405 : 108.0) no description available & (reliability: 442.0) & (original description: Putative EXPB1, Description = Expansin-B1, PFAM = PF03330;PF01357)' T '10.7' 'cell wall.modification' 'niben101scf00536_403547-407792' '(at1g11545 : 444.0) xyloglucan endotransglucosylase/hydrolase 8 (XTH8); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 7 (TAIR:AT4G37800.1); Has 2134 Blast hits to 2114 proteins in 302 species: Archae - 0; Bacteria - 267; Metazoa - 0; Fungi - 408; Plants - 1375; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (gnl|cdd|29536 : 310.0) no description available & (p93349|xth_tobac : 265.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 888.0) & (original description: Putative xth19, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'niben101scf00539_296525-300892' '(q7xwu8|expa1_orysa : 355.0) Expansin-A1 precursor (OsEXPA1) (Alpha-expansin-1) (OsEXP1) (OsaEXPa1.16) (RiExA) - Oryza sativa (Rice) & (at1g20190 : 352.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin 11 (EXPA11); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A1 (TAIR:AT1G69530.4); Has 2193 Blast hits to 2189 proteins in 161 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 64; Plants - 2080; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|85405 : 101.0) no description available & (reliability: 704.0) & (original description: Putative exp1, Description = Expansin, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'niben101scf00614_105806-111077' '(at4g17030 : 291.0) Encodes EXLB1 (expansin-like B1), a member of the expansin family.; expansin-like B1 (EXLB1); INVOLVED IN: sexual reproduction, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin-like A2 (TAIR:AT4G38400.1); Has 1869 Blast hits to 1866 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1858; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (q850k7|exlb1_orysa : 179.0) Expansin-like B1 precursor (OsEXLB1) (Expensin-related 1) (OsEXPR1) (OsaEXPb3.1) - Oryza sativa (Rice) & (reliability: 582.0) & (original description: Putative EXLB1, Description = Expansin-like B1, PFAM = PF03330;PF01357)' T '10.7' 'cell wall.modification' 'niben101scf00640_406467-412980' '(at4g28250 : 369.0) putative beta-expansin/allergen protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin B3 (EXPB3); INVOLVED IN: response to cyclopentenone, syncytium formation, plant-type cell wall organization, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B1 (TAIR:AT2G20750.1); Has 2090 Blast hits to 2086 proteins in 147 species: Archae - 0; Bacteria - 32; Metazoa - 0; Fungi - 5; Plants - 2024; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (q7x6j9|exb17_orysa : 330.0) Expansin-B17 precursor (OsEXPB17) (Beta-expansin-17) (OsaEXPb1.13) - Oryza sativa (Rice) & (gnl|cdd|85405 : 101.0) no description available & (reliability: 738.0) & (original description: Putative EXPB3, Description = Expansin-B3, PFAM = PF03330;PF01357)' T '10.7' 'cell wall.modification' 'niben101scf00663_459059-470164' '(at4g25810 : 367.0) xyloglucan endotransglycosylase-related protein (XTR6); xyloglucan endotransglycosylase 6 (XTR6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein (TAIR:AT5G57560.1); Has 2255 Blast hits to 2235 proteins in 316 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 455; Plants - 1384; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (p35694|bru1_soybn : 361.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 331.0) no description available & (reliability: 734.0) & (original description: Putative XTH23, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 23, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'niben101scf00773_646308-649937' '(at2g40610 : 354.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A8 (EXPA8); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, syncytium formation, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A2 (TAIR:AT5G05290.1); Has 2297 Blast hits to 2294 proteins in 186 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 45; Plants - 2187; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (q40636|expa2_orysa : 339.0) Expansin-A2 precursor (OsEXPA2) (Alpha-expansin-2) (OsEXP2) (OsaEXPa1.23) (RiExB) (RiExC) - Oryza sativa (Rice) & (gnl|cdd|85405 : 115.0) no description available & (reliability: 708.0) & (original description: Putative EXPA8, Description = Expansin-A8, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'niben101scf00780_375-4326' '(at3g45970 : 290.0) member of EXPANSIN-LIKE. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin-like A1 (EXLA1); INVOLVED IN: unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin-like A3 (TAIR:AT3G45960.2); Has 1876 Blast hits to 1873 proteins in 122 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1870; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (q10s70|exla1_orysa : 285.0) Expansin-like A1 precursor (OsEXLA1) (OsEXPL1) (OsaEXPb2.1) - Oryza sativa (Rice) & (reliability: 580.0) & (original description: Putative EXLA2, Description = Expansin-like A2, PFAM = PF03330;PF01357)' T '10.7' 'cell wall.modification' 'niben101scf00887_435072-438273' '(at4g03210 : 336.0) encodes a member of xyloglucan endotransglucosylase/hydrolases (XTHs) that catalyze the cleavage and molecular grafting of xyloglucan chains function in loosening and rearrangement of the cell wall. Gene is expressed in shoot apex region, flower buds, flower stalks and internodes bearing flowers.; xyloglucan endotransglucosylase/hydrolase 9 (XTH9); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 5 (TAIR:AT5G13870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29536 : 336.0) no description available & (q41542|xth_wheat : 298.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) - Triticum aestivum (Wheat) & (reliability: 672.0) & (original description: Putative XTH6, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 6, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'niben101scf00953_538053-543024' '(at2g14620 : 408.0) xyloglucan endotransglucosylase/hydrolase 10 (XTH10); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 7 (TAIR:AT4G37800.1); Has 2030 Blast hits to 2016 proteins in 268 species: Archae - 0; Bacteria - 182; Metazoa - 0; Fungi - 404; Plants - 1378; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|29536 : 300.0) no description available & (q41542|xth_wheat : 265.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) - Triticum aestivum (Wheat) & (reliability: 816.0) & (original description: Putative XTH10, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 10, PFAM = PF00722;PF06955)' T '10.7' 'cell wall.modification' 'niben101scf00984_414588-419915' '(at1g14720 : 448.0) member of Glycoside Hydrolase Family 16; xyloglucan endotransglucosylase/hydrolase 28 (XTH28); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: fruit development, stamen filament development; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: endoxyloglucan transferase A3 (TAIR:AT2G01850.1); Has 2041 Blast hits to 2031 proteins in 289 species: Archae - 0; Bacteria - 238; Metazoa - 0; Fungi - 395; Plants - 1341; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|29536 : 277.0) no description available & (p93349|xth_tobac : 183.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 896.0) & (original description: Putative XTH28, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 28, PFAM = PF00722;PF06955)' T '10.7' 'cell wall.modification' 'niben101scf00996_274304-277803' '(at4g14130 : 356.0) xyloglucan endotransglycosylase-related protein (XTR7); xyloglucan endotransglucosylase/hydrolase 15 (XTH15); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: N-terminal protein myristoylation, carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 16 (TAIR:AT3G23730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35694|bru1_soybn : 353.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 332.0) no description available & (reliability: 712.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'niben101scf01025_1043143-1047962' '(at2g37640 : 384.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; EXP3; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A4 (TAIR:AT2G39700.1); Has 2147 Blast hits to 2144 proteins in 153 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 34; Plants - 2079; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (q852a1|expa7_orysa : 371.0) Expansin-A7 precursor (OsEXPA7) (Alpha-expansin-7) (OsEXP7) (OsaEXPa1.26) - Oryza sativa (Rice) & (gnl|cdd|85405 : 96.0) no description available & (reliability: 768.0) & (original description: Putative orf, Description = Orf protein, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'niben101scf01111_90505-94685' '(at1g12560 : 330.0) Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Containing a conserved root hair-specific cis-element RHE. Expressed specifically in root hair cell.; expansin A7 (EXPA7); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: sperm cell, root hair, root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A18 (TAIR:AT1G62980.1); Has 2192 Blast hits to 2189 proteins in 166 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 53; Plants - 2083; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (q8w2x8|exp30_orysa : 320.0) Putative expansin-A30 precursor (OsEXPA30) (Alpha-expansin-30) (OsEXP30) (OsaEXPa1.32) - Oryza sativa (Rice) & (gnl|cdd|85405 : 85.6) no description available & (reliability: 660.0) & (original description: Putative EXPA7, Description = Expansin-A7, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'niben101scf01143_1202150-1205591' '(at5g39280 : 323.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin A23 (EXPA23); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: extracellular region; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A25 (TAIR:AT5G39300.1); Has 2151 Blast hits to 2148 proteins in 159 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 33; Plants - 2075; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (p93442|expa4_orysa : 274.0) Expansin-A4 precursor (OsEXPA4) (Alpha-expansin-4) (OsEXP4) (OsaEXPa1.22) - Oryza sativa (Rice) & (gnl|cdd|85405 : 93.7) no description available & (reliability: 646.0) & (original description: Putative EXPA25, Description = Expansin-A25, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'niben101scf01237_899740-904402' '(q7xt39|expb5_orysa : 97.4) Expansin-B5 precursor (OsEXPB5) (Beta-expansin-5) (OsaEXPb1.19) - Oryza sativa (Rice) & (at3g60570 : 91.7) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B5 (EXPB5); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin B4 (TAIR:AT2G45110.1); Has 1985 Blast hits to 1982 proteins in 144 species: Archae - 0; Bacteria - 10; Metazoa - 1; Fungi - 27; Plants - 1928; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|85405 : 80.2) no description available & (reliability: 183.4) & (original description: Putative PGSC0003DMG400011638, Description = Expansin B2, BETA 1.4, PFAM = PF01357)' T '10.7' 'cell wall.modification' 'niben101scf01237_1355423-1361762' '(at2g40610 : 320.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A8 (EXPA8); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, syncytium formation, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A2 (TAIR:AT5G05290.1); Has 2297 Blast hits to 2294 proteins in 186 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 45; Plants - 2187; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (q40636|expa2_orysa : 305.0) Expansin-A2 precursor (OsEXPA2) (Alpha-expansin-2) (OsEXP2) (OsaEXPa1.23) (RiExB) (RiExC) - Oryza sativa (Rice) & (gnl|cdd|85405 : 106.0) no description available & (reliability: 640.0) & (original description: Putative EXPA8, Description = Expansin-A8, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'niben101scf01320_381225-387272' '(at3g03220 : 415.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin A13 (EXPA13); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: extracellular region; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A16 (TAIR:AT3G55500.1); Has 2069 Blast hits to 2066 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2056; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (q7xud0|exp10_orysa : 345.0) Expansin-A10 precursor (OsEXPA10) (Alpha-expansin-10) (OsEXP10) (OsaEXPa1.28) - Oryza sativa (Rice) & (gnl|cdd|85405 : 99.9) no description available & (reliability: 830.0) & (original description: Putative EXPA13, Description = Expansin-A13, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'niben101scf01436_181907-211896' '(at1g65680 : 147.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B2 (EXPB2); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B4 (TAIR:AT2G45110.1); Has 2190 Blast hits to 2184 proteins in 158 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 26; Plants - 2110; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (q7xt40|exb15_orysa : 142.0) Expansin-B15 precursor (OsEXPB15) (Beta-expansin-15) (OsaEXPb1.16) - Oryza sativa (Rice) & (reliability: 294.0) & (original description: Putative cim1, Description = Expansin-like protein B1, PFAM = PF03330)' T '10.7' 'cell wall.modification' 'niben101scf01436_207966-211983' '(at1g65680 : 185.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B2 (EXPB2); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B4 (TAIR:AT2G45110.1); Has 2190 Blast hits to 2184 proteins in 158 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 26; Plants - 2110; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (q7xt40|exb15_orysa : 179.0) Expansin-B15 precursor (OsEXPB15) (Beta-expansin-15) (OsaEXPb1.16) - Oryza sativa (Rice) & (gnl|cdd|85405 : 81.4) no description available & (reliability: 370.0) & (original description: Putative cim1, Description = Barwin-like endoglucanase, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'niben101scf01591_28500-35914' '(at5g57550 : 340.0) xyloglucan endotransglycosylase-related protein (XTR3); xyloglucan endotransglucosylase/hydrolase 25 (XTH25); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29536 : 317.0) no description available & (p35694|bru1_soybn : 316.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (reliability: 680.0) & (original description: Putative xet1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'niben101scf01685_1186904-1190867' '(at4g03210 : 452.0) encodes a member of xyloglucan endotransglucosylase/hydrolases (XTHs) that catalyze the cleavage and molecular grafting of xyloglucan chains function in loosening and rearrangement of the cell wall. Gene is expressed in shoot apex region, flower buds, flower stalks and internodes bearing flowers.; xyloglucan endotransglucosylase/hydrolase 9 (XTH9); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 5 (TAIR:AT5G13870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29536 : 314.0) no description available & (q39857|xth_soybn : 305.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) (Fragment) - Glycine max (Soybean) & (reliability: 904.0) & (original description: Putative XTH9, Description = Xyloglucan endotransglucosylase/hydrolase protein 9, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'niben101scf01959_493883-498502' '(at3g15370 : 306.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin 12 (EXPA12); INVOLVED IN: plant-type cell wall organization, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A17 (TAIR:AT4G01630.1); Has 2144 Blast hits to 2141 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 40; Plants - 2066; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (q7xwu8|expa1_orysa : 235.0) Expansin-A1 precursor (OsEXPA1) (Alpha-expansin-1) (OsEXP1) (OsaEXPa1.16) (RiExA) - Oryza sativa (Rice) & (gnl|cdd|85405 : 90.6) no description available & (reliability: 612.0) & (original description: Putative EXPA12, Description = Expansin-A12, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'niben101scf02413_186870-192308' '(at5g57550 : 379.0) xyloglucan endotransglycosylase-related protein (XTR3); xyloglucan endotransglucosylase/hydrolase 25 (XTH25); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35694|bru1_soybn : 364.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 329.0) no description available & (reliability: 758.0) & (original description: Putative XTH25, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 25, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'niben101scf02413_227990-234096' '(at5g57550 : 358.0) xyloglucan endotransglycosylase-related protein (XTR3); xyloglucan endotransglucosylase/hydrolase 25 (XTH25); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29536 : 331.0) no description available & (p35694|bru1_soybn : 329.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (reliability: 716.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF00722;PF06955)' T '10.7' 'cell wall.modification' 'niben101scf02552_289661-292925' '(q7xwu8|expa1_orysa : 360.0) Expansin-A1 precursor (OsEXPA1) (Alpha-expansin-1) (OsEXP1) (OsaEXPa1.16) (RiExA) - Oryza sativa (Rice) & (at1g20190 : 350.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin 11 (EXPA11); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A1 (TAIR:AT1G69530.4); Has 2193 Blast hits to 2189 proteins in 161 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 64; Plants - 2080; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|85405 : 98.7) no description available & (reliability: 700.0) & (original description: Putative exp1, Description = Expansin, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'niben101scf02860_179478-183886' '(at1g11545 : 444.0) xyloglucan endotransglucosylase/hydrolase 8 (XTH8); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 7 (TAIR:AT4G37800.1); Has 2134 Blast hits to 2114 proteins in 302 species: Archae - 0; Bacteria - 267; Metazoa - 0; Fungi - 408; Plants - 1375; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (gnl|cdd|29536 : 311.0) no description available & (p93349|xth_tobac : 265.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 888.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF00722;PF06955)' T '10.7' 'cell wall.modification' 'niben101scf02990_518438-521944' '(at4g37800 : 473.0) xyloglucan endotransglucosylase/hydrolase 7 (XTH7); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 6 (TAIR:AT5G65730.1); Has 2144 Blast hits to 2126 proteins in 283 species: Archae - 0; Bacteria - 226; Metazoa - 0; Fungi - 448; Plants - 1383; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|29536 : 332.0) no description available & (p93349|xth_tobac : 305.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 946.0) & (original description: Putative XTH6, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 6, PFAM = PF00722;PF06955)' T '10.7' 'cell wall.modification' 'niben101scf02990_637140-640620' '(at4g37800 : 475.0) xyloglucan endotransglucosylase/hydrolase 7 (XTH7); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 6 (TAIR:AT5G65730.1); Has 2144 Blast hits to 2126 proteins in 283 species: Archae - 0; Bacteria - 226; Metazoa - 0; Fungi - 448; Plants - 1383; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|29536 : 330.0) no description available & (p93349|xth_tobac : 304.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 950.0) & (original description: Putative XTH7, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 7, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'niben101scf03056_191348-194735' '(at5g39280 : 320.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin A23 (EXPA23); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: extracellular region; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A25 (TAIR:AT5G39300.1); Has 2151 Blast hits to 2148 proteins in 159 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 33; Plants - 2075; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (q852a1|expa7_orysa : 278.0) Expansin-A7 precursor (OsEXPA7) (Alpha-expansin-7) (OsEXP7) (OsaEXPa1.26) - Oryza sativa (Rice) & (gnl|cdd|86296 : 91.8) no description available & (reliability: 640.0) & (original description: Putative EXPA25, Description = Expansin-A25, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'niben101scf03128_784307-788065' '(q4pr43|exp23_orysa : 361.0) Expansin-A23 precursor (OsEXPA23) (Alpha-expansin-23) (OsEXP23) (OsaEXPa1.12) - Oryza sativa (Rice) & (at1g20190 : 352.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin 11 (EXPA11); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A1 (TAIR:AT1G69530.4); Has 2193 Blast hits to 2189 proteins in 161 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 64; Plants - 2080; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|85405 : 99.9) no description available & (reliability: 704.0) & (original description: Putative exp1, Description = Expansin, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'niben101scf03170_124746-128816' '(gnl|cdd|29536 : 223.0) no description available & (at4g13080 : 218.0) xyloglucan endotransglucosylase/hydrolase 1 (XTH1); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 2 (TAIR:AT4G13090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q41542|xth_wheat : 186.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) - Triticum aestivum (Wheat) & (reliability: 436.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'niben101scf03284_1-2330' '(at4g30380 : 145.0) Encodes a Plant Natriuretic Peptide (PNP). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive.; Barwin-related endoglucanase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: plant natriuretic peptide A (TAIR:AT2G18660.1); Has 507 Blast hits to 506 proteins in 104 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi - 44; Plants - 427; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative EGC1, Description = Putative EG45-like domain containing protein 1, PFAM = PF03330)' T '10.7' 'cell wall.modification' 'niben101scf03545_182221-187484' '(at2g39700 : 423.0) putative expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A4 (EXPA4); CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A16 (TAIR:AT3G55500.1); Has 2158 Blast hits to 2155 proteins in 155 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 41; Plants - 2085; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (q852a1|expa7_orysa : 409.0) Expansin-A7 precursor (OsEXPA7) (Alpha-expansin-7) (OsEXP7) (OsaEXPa1.26) - Oryza sativa (Rice) & (gnl|cdd|85405 : 101.0) no description available & (reliability: 846.0) & (original description: Putative exp9, Description = Expansin9, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'niben101scf03638_102223-107920' '(at1g32170 : 408.0) xyloglucan endotransglycosylase-related protein (XTR4); xyloglucan endotransglucosylase/hydrolase 30 (XTH30); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 29 (TAIR:AT4G18990.1); Has 2058 Blast hits to 2046 proteins in 299 species: Archae - 2; Bacteria - 244; Metazoa - 0; Fungi - 398; Plants - 1344; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|29536 : 257.0) no description available & (p93349|xth_tobac : 188.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 816.0) & (original description: Putative XTH30, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 30, PFAM = PF00722;PF06955)' T '10.7' 'cell wall.modification' 'niben101scf03644_168288-172320' '(at1g65680 : 247.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B2 (EXPB2); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B4 (TAIR:AT2G45110.1); Has 2190 Blast hits to 2184 proteins in 158 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 26; Plants - 2110; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (q7xt40|exb15_orysa : 244.0) Expansin-B15 precursor (OsEXPB15) (Beta-expansin-15) (OsaEXPb1.16) - Oryza sativa (Rice) & (gnl|cdd|85405 : 98.0) no description available & (reliability: 494.0) & (original description: Putative cim1, Description = Cytokinin induced message, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'niben101scf03644_168825-170620' '(at1g65680 : 133.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B2 (EXPB2); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B4 (TAIR:AT2G45110.1); Has 2190 Blast hits to 2184 proteins in 158 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 26; Plants - 2110; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (q7xt40|exb15_orysa : 126.0) Expansin-B15 precursor (OsEXPB15) (Beta-expansin-15) (OsaEXPb1.16) - Oryza sativa (Rice) & (reliability: 266.0) & (original description: Putative cim1, Description = Expansin B protein, PFAM = PF03330)' T '10.7' 'cell wall.modification' 'niben101scf03852_70426-74003' '(at4g17030 : 270.0) Encodes EXLB1 (expansin-like B1), a member of the expansin family.; expansin-like B1 (EXLB1); INVOLVED IN: sexual reproduction, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin-like A2 (TAIR:AT4G38400.1); Has 1869 Blast hits to 1866 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1858; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (q850k7|exlb1_orysa : 185.0) Expansin-like B1 precursor (OsEXLB1) (Expensin-related 1) (OsEXPR1) (OsaEXPb3.1) - Oryza sativa (Rice) & (reliability: 540.0) & (original description: Putative EXLB1, Description = Expansin-like B1, PFAM = PF03330;PF01357)' T '10.7' 'cell wall.modification' 'niben101scf03898_368891-372676' '(at1g11545 : 438.0) xyloglucan endotransglucosylase/hydrolase 8 (XTH8); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 7 (TAIR:AT4G37800.1); Has 2134 Blast hits to 2114 proteins in 302 species: Archae - 0; Bacteria - 267; Metazoa - 0; Fungi - 408; Plants - 1375; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (gnl|cdd|29536 : 307.0) no description available & (p93349|xth_tobac : 266.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 876.0) & (original description: Putative XTH8, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 8, PFAM = PF00722;PF06955)' T '10.7' 'cell wall.modification' 'niben101scf03913_225186-229758' '(at4g38400 : 265.0) member of EXPANSIN-LIKE. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin-like A2 (EXLA2); INVOLVED IN: response to cyclopentenone, plant-type cell wall organization, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin-like A1 (TAIR:AT3G45970.1); Has 1877 Blast hits to 1874 proteins in 122 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1869; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q10s70|exla1_orysa : 241.0) Expansin-like A1 precursor (OsEXLA1) (OsEXPL1) (OsaEXPb2.1) - Oryza sativa (Rice) & (reliability: 530.0) & (original description: Putative EXLA1, Description = Expansin-like A1, PFAM = PF01357)' T '10.7' 'cell wall.modification' 'niben101scf04102_391109-395542' '(at4g28250 : 382.0) putative beta-expansin/allergen protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin B3 (EXPB3); INVOLVED IN: response to cyclopentenone, syncytium formation, plant-type cell wall organization, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B1 (TAIR:AT2G20750.1); Has 2090 Blast hits to 2086 proteins in 147 species: Archae - 0; Bacteria - 32; Metazoa - 0; Fungi - 5; Plants - 2024; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (q7x6j9|exb17_orysa : 366.0) Expansin-B17 precursor (OsEXPB17) (Beta-expansin-17) (OsaEXPb1.13) - Oryza sativa (Rice) & (gnl|cdd|85405 : 102.0) no description available & (reliability: 764.0) & (original description: Putative EXPB3, Description = Expansin-B3, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'niben101scf04124_6481-9876' '(q6h677|exb14_orysa : 208.0) Putative expansin-B14 precursor (OsEXPB14) (Beta-expansin-14) (OsEXPB16) (OsaEXPb1.14) (OsaEXPb1.18) - Oryza sativa (Rice) & (at1g65680 : 189.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B2 (EXPB2); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B4 (TAIR:AT2G45110.1); Has 2190 Blast hits to 2184 proteins in 158 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 26; Plants - 2110; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative EXPB3, Description = Expansin-B3, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'niben101scf04392_426191-431777' '(at4g25810 : 394.0) xyloglucan endotransglycosylase-related protein (XTR6); xyloglucan endotransglycosylase 6 (XTR6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein (TAIR:AT5G57560.1); Has 2255 Blast hits to 2235 proteins in 316 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 455; Plants - 1384; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (p35694|bru1_soybn : 371.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 336.0) no description available & (reliability: 788.0) & (original description: Putative xth2, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF00722;PF06955)' T '10.7' 'cell wall.modification' 'niben101scf04557_38449-42317' '(at3g44990 : 372.0) xyloglucan endo-transglycosylase; xyloglucan endo-transglycosylase-related 8 (XTR8); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: cell wall biogenesis; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 32 (TAIR:AT2G36870.1); Has 1950 Blast hits to 1931 proteins in 270 species: Archae - 2; Bacteria - 210; Metazoa - 0; Fungi - 320; Plants - 1353; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|29536 : 273.0) no description available & (p93349|xth_tobac : 185.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 744.0) & (original description: Putative XTH31, Description = Xyloglucan endotransglucosylase/hydrolase protein 31, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'niben101scf04643_399226-403180' '(at2g36870 : 453.0) xyloglucan endotransglucosylase/hydrolase 32 (XTH32); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endo-transglycosylase-related 8 (TAIR:AT3G44990.1). & (gnl|cdd|29536 : 272.0) no description available & (p93349|xth_tobac : 195.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 906.0) & (original description: Putative XTH32, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 32, PFAM = PF00722;PF06955)' T '10.7' 'cell wall.modification' 'niben101scf04829_91907-98853' '(at4g28850 : 357.0) xyloglucan endotransglucosylase/hydrolase 26 (XTH26); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 16 (TAIR:AT3G23730.1); Has 2230 Blast hits to 2210 proteins in 325 species: Archae - 0; Bacteria - 312; Metazoa - 0; Fungi - 457; Plants - 1370; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|29536 : 291.0) no description available & (p35694|bru1_soybn : 270.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (reliability: 714.0) & (original description: Putative XTH26, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 26, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'niben101scf04829_271313-299330' '(at4g28850 : 377.0) xyloglucan endotransglucosylase/hydrolase 26 (XTH26); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 16 (TAIR:AT3G23730.1); Has 2230 Blast hits to 2210 proteins in 325 species: Archae - 0; Bacteria - 312; Metazoa - 0; Fungi - 457; Plants - 1370; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|29536 : 302.0) no description available & (q39857|xth_soybn : 261.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) (Fragment) - Glycine max (Soybean) & (reliability: 754.0) & (original description: Putative XTH26, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 26, PFAM = PF00722;PF06955)' T '10.7' 'cell wall.modification' 'niben101scf05060_738298-741963' '(at2g03090 : 308.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A15 (EXPA15); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, syncytium formation, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A1 (TAIR:AT1G69530.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93442|expa4_orysa : 290.0) Expansin-A4 precursor (OsEXPA4) (Alpha-expansin-4) (OsEXP4) (OsaEXPa1.22) - Oryza sativa (Rice) & (gnl|cdd|85405 : 111.0) no description available & (reliability: 616.0) & (original description: Putative EXPA10, Description = Expansin-A10, PFAM = PF03330;PF01357)' T '10.7' 'cell wall.modification' 'niben101scf05702_309186-312242' '(at3g23730 : 380.0) xyloglucan endotransglucosylase/hydrolase 16 (XTH16); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 15 (TAIR:AT4G14130.1); Has 2187 Blast hits to 2165 proteins in 308 species: Archae - 0; Bacteria - 273; Metazoa - 0; Fungi - 414; Plants - 1389; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (p35694|bru1_soybn : 358.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 329.0) no description available & (reliability: 760.0) & (original description: Putative XTH16, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 16, PFAM = PF00722;PF06955)' T '10.7' 'cell wall.modification' 'niben101scf06275_234380-237776' '(at4g30380 : 84.3) Encodes a Plant Natriuretic Peptide (PNP). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive.; Barwin-related endoglucanase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: plant natriuretic peptide A (TAIR:AT2G18660.1); Has 507 Blast hits to 506 proteins in 104 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi - 44; Plants - 427; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative EGC1, Description = AtEXPR2, PFAM = PF03330)' T '10.7' 'cell wall.modification' 'niben101scf06482_196798-201213' '(at2g37640 : 419.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; EXP3; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A4 (TAIR:AT2G39700.1); Has 2147 Blast hits to 2144 proteins in 153 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 34; Plants - 2079; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (q852a1|expa7_orysa : 386.0) Expansin-A7 precursor (OsEXPA7) (Alpha-expansin-7) (OsEXP7) (OsaEXPa1.26) - Oryza sativa (Rice) & (gnl|cdd|85405 : 96.4) no description available & (reliability: 838.0) & (original description: Putative EXPA3, Description = Expansin-A3, PFAM = PF03330;PF01357)' T '10.7' 'cell wall.modification' 'niben101scf06848_323123-327350' '(at3g25050 : 241.0) encodes a xyloglucan endotransglucosylase/hydrolase. Higher expression in flowers and in response to IAA treatment.; xyloglucan endotransglucosylase/hydrolase 3 (XTH3); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: photoperiodism, flowering, plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 2 (TAIR:AT4G13090.1); Has 2162 Blast hits to 2140 proteins in 309 species: Archae - 0; Bacteria - 288; Metazoa - 0; Fungi - 427; Plants - 1372; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|29536 : 235.0) no description available & (q41542|xth_wheat : 202.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) - Triticum aestivum (Wheat) & (reliability: 482.0) & (original description: Putative XTH3, Description = Xyloglucan endotransglucosylase/hydrolase protein 3, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'niben101scf07231_464027-467908' '(at2g03090 : 354.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A15 (EXPA15); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, syncytium formation, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A1 (TAIR:AT1G69530.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q40636|expa2_orysa : 314.0) Expansin-A2 precursor (OsEXPA2) (Alpha-expansin-2) (OsEXP2) (OsaEXPa1.23) (RiExB) (RiExC) - Oryza sativa (Rice) & (gnl|cdd|85405 : 109.0) no description available & (reliability: 708.0) & (original description: Putative EXPA15, Description = Expansin-A15, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'niben101scf07244_60647-63772' '(at4g14130 : 362.0) xyloglucan endotransglycosylase-related protein (XTR7); xyloglucan endotransglucosylase/hydrolase 15 (XTH15); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: N-terminal protein myristoylation, carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 16 (TAIR:AT3G23730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35694|bru1_soybn : 357.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (gnl|cdd|29536 : 331.0) no description available & (reliability: 724.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF00722;PF06955)' T '10.7' 'cell wall.modification' 'niben101scf07325_31411-34811' '(at5g39280 : 296.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin A23 (EXPA23); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: extracellular region; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A25 (TAIR:AT5G39300.1); Has 2151 Blast hits to 2148 proteins in 159 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 33; Plants - 2075; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (p93442|expa4_orysa : 250.0) Expansin-A4 precursor (OsEXPA4) (Alpha-expansin-4) (OsEXP4) (OsaEXPa1.22) - Oryza sativa (Rice) & (gnl|cdd|86296 : 90.6) no description available & (reliability: 592.0) & (original description: Putative EXPA25, Description = Expansin-A25, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'niben101scf08047_116697-120748' '(at3g45970 : 331.0) member of EXPANSIN-LIKE. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin-like A1 (EXLA1); INVOLVED IN: unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin-like A3 (TAIR:AT3G45960.2); Has 1876 Blast hits to 1873 proteins in 122 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1870; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (q10s70|exla1_orysa : 308.0) Expansin-like A1 precursor (OsEXLA1) (OsEXPL1) (OsaEXPb2.1) - Oryza sativa (Rice) & (reliability: 662.0) & (original description: Putative EXLA1, Description = Expansin-like A1, PFAM = PF03330;PF01357)' T '10.7' 'cell wall.modification' 'niben101scf08633_67723-72703' '(at1g10550 : 377.0) Encodes a membrane-localized protein that is predicted to function during cell wall modification.Overexpression of XTH33 results in abnormal cell morphology. It's expression is under epigenetic control by ATX1.; xyloglucan:xyloglucosyl transferase 33 (XTH33); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth; LOCATED IN: integral to plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 28 (TAIR:AT1G14720.1); Has 2022 Blast hits to 2008 proteins in 287 species: Archae - 0; Bacteria - 257; Metazoa - 0; Fungi - 351; Plants - 1343; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|29536 : 253.0) no description available & (p93349|xth_tobac : 201.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 754.0) & (original description: Putative XTH33, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 33, PFAM = PF00722;PF06955)' T '10.7' 'cell wall.modification' 'niben101scf08899_87481-100604' '(gnl|cdd|29536 : 171.0) no description available & (at4g13080 : 163.0) xyloglucan endotransglucosylase/hydrolase 1 (XTH1); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 2 (TAIR:AT4G13090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93349|xth_tobac : 138.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 326.0) & (original description: Putative xth26, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF00722;PF06955)' T '10.7' 'cell wall.modification' 'niben101scf09075_425358-429072' '(at5g65730 : 464.0) xyloglucan endotransglucosylase/hydrolase 6 (XTH6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: response to water deprivation; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 7 (TAIR:AT4G37800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29536 : 330.0) no description available & (p93349|xth_tobac : 300.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 928.0) & (original description: Putative XTH7, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF00722;PF06955)' T '10.7' 'cell wall.modification' 'niben101scf09099_125057-153885' '(at4g13090 : 245.0) xyloglucan endotransglucosylase/hydrolase 2 (XTH2); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 1 (TAIR:AT4G13080.1); Has 2168 Blast hits to 2148 proteins in 309 species: Archae - 0; Bacteria - 292; Metazoa - 0; Fungi - 434; Plants - 1369; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (q41638|xtha_phaan : 211.0) Xyloglucan endotransglucosylase/hydrolase protein A precursor (EC 2.4.1.207) (VaXTH1) - Phaseolus angularis (Adzuki bean) (Vigna angularis) & (gnl|cdd|29536 : 211.0) no description available & (reliability: 490.0) & (original description: Putative xth21, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'niben101scf09260_117812-123151' '(at2g01850 : 451.0) EXGT-A3 has homology to xyloglucan endotransglucosylases/hydrolases (XTHs). Mutants in this gene show a lesion mimic phenotype associated with leaf maturation and a reduction in the number of tertiary veins. Individual tracheary elements in the mutants are shorter, but phloem transport activity is not severely affected. EXGT-A3 plays a role in xyloglucan degradation in the differentiating tracheary elements of rosette leaves.; endoxyloglucan transferase A3 (EXGT-A3); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: phloem or xylem histogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 28 (TAIR:AT1G14720.1); Has 2101 Blast hits to 2091 proteins in 291 species: Archae - 0; Bacteria - 238; Metazoa - 0; Fungi - 449; Plants - 1341; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|29536 : 289.0) no description available & (p93349|xth_tobac : 201.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 902.0) & (original description: Putative XTH27, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 27, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'niben101scf09284_92198-95562' '(q850k7|exlb1_orysa : 315.0) Expansin-like B1 precursor (OsEXLB1) (Expensin-related 1) (OsEXPR1) (OsaEXPb3.1) - Oryza sativa (Rice) & (at4g17030 : 197.0) Encodes EXLB1 (expansin-like B1), a member of the expansin family.; expansin-like B1 (EXLB1); INVOLVED IN: sexual reproduction, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin-like A2 (TAIR:AT4G38400.1); Has 1869 Blast hits to 1866 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1858; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative EXLB1, Description = Expansin-like B1, PFAM = PF03330;PF01357)' T '10.7' 'cell wall.modification' 'niben101scf09711_54847-59673' '(at1g32170 : 422.0) xyloglucan endotransglycosylase-related protein (XTR4); xyloglucan endotransglucosylase/hydrolase 30 (XTH30); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 29 (TAIR:AT4G18990.1); Has 2058 Blast hits to 2046 proteins in 299 species: Archae - 2; Bacteria - 244; Metazoa - 0; Fungi - 398; Plants - 1344; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|29536 : 277.0) no description available & (q41638|xtha_phaan : 198.0) Xyloglucan endotransglucosylase/hydrolase protein A precursor (EC 2.4.1.207) (VaXTH1) - Phaseolus angularis (Adzuki bean) (Vigna angularis) & (reliability: 844.0) & (original description: Putative XTH30, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 30, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'niben101scf09816_126654-129329' '(at2g18660 : 89.4) Encodes PNP-A (Plant Natriuretic Peptide A). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive. PNP-A contains a signal peptide domain and is secreted into the extracellular space. Co-expression analyses using microarray data suggest that PNP-A may function as a component of plant defence response and SAR in particular, and could be classified as a newly identified PR protein.; plant natriuretic peptide A (PNP-A); LOCATED IN: extracellular region, cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: Barwin-related endoglucanase (TAIR:AT4G30380.1); Has 232 Blast hits to 231 proteins in 52 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 6; Plants - 214; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative Ave1, Description = Avirulent on Ve1, PFAM = PF03330)' T '10.7' 'cell wall.modification' 'niben101scf09938_155660-158136' '(q6h677|exb14_orysa : 130.0) Putative expansin-B14 precursor (OsEXPB14) (Beta-expansin-14) (OsEXPB16) (OsaEXPb1.14) (OsaEXPb1.18) - Oryza sativa (Rice) & (at2g45110 : 118.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B4 (EXPB4); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: beta expansin 6 (TAIR:AT1G65681.1); Has 2182 Blast hits to 2179 proteins in 176 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 32; Plants - 2098; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative cim1, Description = Putative expansin-B14, PFAM = PF01357)' T '10.7' 'cell wall.modification' 'niben101scf10385_86454-92086' '(at3g03220 : 410.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin A13 (EXPA13); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: extracellular region; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A16 (TAIR:AT3G55500.1); Has 2069 Blast hits to 2066 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2056; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (q7xud0|exp10_orysa : 340.0) Expansin-A10 precursor (OsEXPA10) (Alpha-expansin-10) (OsEXP10) (OsaEXPa1.28) - Oryza sativa (Rice) & (gnl|cdd|85405 : 99.5) no description available & (reliability: 820.0) & (original description: Putative EXPA13, Description = Expansin-A13, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'niben101scf10785_75440-81807' '(q8lnz5|xthb_phaan : 473.0) Probable xyloglucan endotransglucosylase/hydrolase protein B precursor (EC 2.4.1.207) (VaXTH2) - Phaseolus angularis (Adzuki bean) (Vigna angularis) & (at5g13870 : 462.0) EXGT-A4, endoxyloglucan transferase,; xyloglucan endotransglucosylase/hydrolase 5 (XTH5); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 4 (TAIR:AT2G06850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29536 : 320.0) no description available & (reliability: 924.0) & (original description: Putative XTHB, Description = Probable xyloglucan endotransglucosylase/hydrolase protein B, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'niben101scf11124_102243-108114' '(at4g13090 : 339.0) xyloglucan endotransglucosylase/hydrolase 2 (XTH2); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 1 (TAIR:AT4G13080.1); Has 2168 Blast hits to 2148 proteins in 309 species: Archae - 0; Bacteria - 292; Metazoa - 0; Fungi - 434; Plants - 1369; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|29536 : 295.0) no description available & (q41638|xtha_phaan : 279.0) Xyloglucan endotransglucosylase/hydrolase protein A precursor (EC 2.4.1.207) (VaXTH1) - Phaseolus angularis (Adzuki bean) (Vigna angularis) & (reliability: 678.0) & (original description: Putative XTH2, Description = Xyloglucan endotransglucosylase/hydrolase protein 2, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'niben101scf11767_216562-219520' '(at4g30380 : 149.0) Encodes a Plant Natriuretic Peptide (PNP). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive.; Barwin-related endoglucanase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: plant natriuretic peptide A (TAIR:AT2G18660.1); Has 507 Blast hits to 506 proteins in 104 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi - 44; Plants - 427; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative EGC1, Description = Putative EG45-like domain containing protein 1, PFAM = PF03330)' T '10.7' 'cell wall.modification' 'niben101scf12954_168658-173215' '(p93349|xth_tobac : 608.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (at5g13870 : 449.0) EXGT-A4, endoxyloglucan transferase,; xyloglucan endotransglucosylase/hydrolase 5 (XTH5); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 4 (TAIR:AT2G06850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29536 : 319.0) no description available & (reliability: 898.0) & (original description: Putative XTH, Description = Probable xyloglucan endotransglucosylase/hydrolase protein, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'niben101scf13833_113545-117792' '(at2g39700 : 423.0) putative expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A4 (EXPA4); CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A16 (TAIR:AT3G55500.1); Has 2158 Blast hits to 2155 proteins in 155 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 41; Plants - 2085; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (q852a1|expa7_orysa : 408.0) Expansin-A7 precursor (OsEXPA7) (Alpha-expansin-7) (OsEXP7) (OsaEXPa1.26) - Oryza sativa (Rice) & (gnl|cdd|85405 : 100.0) no description available & (reliability: 846.0) & (original description: Putative exp9, Description = Expansin9, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'niben101scf14470_7844-10954' '(at3g23730 : 348.0) xyloglucan endotransglucosylase/hydrolase 16 (XTH16); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 15 (TAIR:AT4G14130.1); Has 2187 Blast hits to 2165 proteins in 308 species: Archae - 0; Bacteria - 273; Metazoa - 0; Fungi - 414; Plants - 1389; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|29536 : 330.0) no description available & (p35694|bru1_soybn : 319.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (reliability: 696.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T '10.7' 'cell wall.modification' 'niben101scf15065_3621-7101' '(at1g11545 : 409.0) xyloglucan endotransglucosylase/hydrolase 8 (XTH8); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 7 (TAIR:AT4G37800.1); Has 2134 Blast hits to 2114 proteins in 302 species: Archae - 0; Bacteria - 267; Metazoa - 0; Fungi - 408; Plants - 1375; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (gnl|cdd|29536 : 300.0) no description available & (p93349|xth_tobac : 255.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 818.0) & (original description: Putative XTH8, Description = Probable xyloglucan endotransglucosylase/hydrolase protein 8, PFAM = PF00722;PF06955)' T '10.7' 'cell wall.modification' 'niben101scf20887_55177-58353' '(p93442|expa4_orysa : 318.0) Expansin-A4 precursor (OsEXPA4) (Alpha-expansin-4) (OsEXP4) (OsaEXPa1.22) - Oryza sativa (Rice) & (at2g40610 : 316.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A8 (EXPA8); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, syncytium formation, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A2 (TAIR:AT5G05290.1); Has 2297 Blast hits to 2294 proteins in 186 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 45; Plants - 2187; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|85405 : 106.0) no description available & (reliability: 632.0) & (original description: Putative EXPA2, Description = Expansin-A2, PFAM = PF03330;PF01357)' T '10.7' 'cell wall.modification' 'niben101scf25578_32004-35534' '(at2g03090 : 262.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A15 (EXPA15); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, syncytium formation, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A1 (TAIR:AT1G69530.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93442|expa4_orysa : 236.0) Expansin-A4 precursor (OsEXPA4) (Alpha-expansin-4) (OsEXP4) (OsaEXPa1.22) - Oryza sativa (Rice) & (gnl|cdd|85405 : 109.0) no description available & (reliability: 524.0) & (original description: Putative EXPA1, Description = Expansin-A1, PFAM = PF01357;PF03330)' T '10.7' 'cell wall.modification' 'niben101scf28230_47392-51741' '(p35694|bru1_soybn : 446.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (at3g23730 : 425.0) xyloglucan endotransglucosylase/hydrolase 16 (XTH16); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 15 (TAIR:AT4G14130.1); Has 2187 Blast hits to 2165 proteins in 308 species: Archae - 0; Bacteria - 273; Metazoa - 0; Fungi - 414; Plants - 1389; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|29536 : 326.0) no description available & (reliability: 850.0) & (original description: Putative xth1, Description = Xyloglucan endotransglucosylase/hydrolase, PFAM = PF06955;PF00722)' T '10.8' 'cell wall.pectin*esterases' '' '' '10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.3scaffold4760_8793-13641' '(at5g27870 : 556.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G05610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 474.0) no description available & (q42920|pme_medsa : 396.0) Pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) (P65) - Medicago sativa (Alfalfa) & (reliability: 1112.0) & (original description: Putative PME28, Description = Putative pectinesterase/pectinesterase inhibitor 28, PFAM = PF01095;PF04043)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.3scaffold5504_37589-40176' '(gnl|cdd|85238 : 205.0) no description available & (at5g27870 : 169.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G05610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43062|pme_prupe : 147.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 338.0) & (original description: Putative pme2, Description = Pectinesterase, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.3scaffold6755_51525-56935' '(at5g09760 : 615.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G64640.1); Has 2807 Blast hits to 2761 proteins in 473 species: Archae - 6; Bacteria - 874; Metazoa - 1; Fungi - 174; Plants - 1725; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|85238 : 399.0) no description available & (o04887|pme2_citsi : 296.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 1230.0) & (original description: Putative PGSC0003DMG400028674, Description = Pectinesterase, PFAM = PF01095;PF04043)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.3scaffold7078_52430-57477' '(at1g76160 : 792.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 613.0) no description available & (q00624|aso_brana : 556.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 146.0) no description available & (reliability: 1504.0) & (original description: Putative sks4, Description = L-ascorbate oxidase-like protein, PFAM = PF07731;PF00394;PF07732)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.3scaffold16806_13565-19012' '(at5g53370 : 785.0) pectin methylesterase PCR fragment F (PMEPCRF); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G49220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 509.0) no description available & (p83948|pme3_citsi : 462.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1570.0) & (original description: Putative PME61, Description = Probable pectinesterase/pectinesterase inhibitor 61, PFAM = PF01095;PF04043)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.3scaffold25159_1320-9287' '(at1g21850 : 303.0) SKU5 similar 8 (sks8); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 7 (TAIR:AT1G21860.1); Has 5145 Blast hits to 5091 proteins in 951 species: Archae - 16; Bacteria - 1604; Metazoa - 263; Fungi - 1857; Plants - 1262; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|36477 : 288.0) no description available & (q00624|aso_brana : 262.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 103.0) no description available & (reliability: 562.0) & (original description: Putative glysoja_017008, Description = Monocopper oxidase-like protein SKU5, PFAM = PF07732;PF07731;PF00394)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.3scaffold28650_1-4231' '(at2g36710 : 354.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G36700.1); Has 6628 Blast hits to 4257 proteins in 552 species: Archae - 11; Bacteria - 922; Metazoa - 2127; Fungi - 511; Plants - 1794; Viruses - 17; Other Eukaryotes - 1246 (source: NCBI BLink). & (gnl|cdd|85238 : 237.0) no description available & (q43062|pme_prupe : 141.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 708.0) & (original description: Putative pme1, Description = Pectinesterase, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.3scaffold42436_7660-13011' '(at5g47500 : 376.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 162.0) no description available & (p83948|pme3_citsi : 107.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 752.0) & (original description: Putative PME2, Description = Pectinesterase, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.3scaffold42880_15305-18095' '(at1g05310 : 197.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G36710.1); Has 4576 Blast hits to 3466 proteins in 439 species: Archae - 11; Bacteria - 724; Metazoa - 994; Fungi - 355; Plants - 1773; Viruses - 6; Other Eukaryotes - 713 (source: NCBI BLink). & (gnl|cdd|85238 : 106.0) no description available & (reliability: 394.0) & (original description: Putative pme1, Description = Pectinesterase, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.3scaffold75837_3481-7817' '(at5g55590 : 396.0) Encodes a protein with pectin methylesterase activity. No change in activity were detected in mutants defective in this gene, which was interpreted as a result of redundancy of product function with other pectin methylesterases. The gene product is required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation.; QUARTET 1 (QRT1); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: pectin catabolic process; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 5 post anthesis, sepals enclosing floral bud, petal differentiation and expansion stage, fruit development stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G47500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 265.0) no description available & (p83948|pme3_citsi : 164.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 792.0) & (original description: Putative QRT1, Description = Pectinesterase QRT1, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.3scaffold101800_1-3620' '(at2g47030 : 405.0) VGDH1; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: male gametophyte, flower, pollen tube; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT2G47040.1); Has 2990 Blast hits to 2923 proteins in 471 species: Archae - 6; Bacteria - 907; Metazoa - 1; Fungi - 197; Plants - 1853; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (p41510|pme_brana : 371.0) Probable pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Brassica napus (Rape) & (gnl|cdd|85238 : 352.0) no description available & (reliability: 810.0) & (original description: Putative PGSC0003DMG400005208, Description = Pectinesterase, PFAM = PF04043;PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.5scaffold3_1370010-1373975' '(at5g27870 : 554.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G05610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 491.0) no description available & (q42920|pme_medsa : 454.0) Pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) (P65) - Medicago sativa (Alfalfa) & (reliability: 1108.0) & (original description: Putative PME21, Description = Probable pectinesterase/pectinesterase inhibitor 21, PFAM = PF04043;PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.5scaffold934_462469-466634' '(at2g47030 : 440.0) VGDH1; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: male gametophyte, flower, pollen tube; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT2G47040.1); Has 2990 Blast hits to 2923 proteins in 471 species: Archae - 6; Bacteria - 907; Metazoa - 1; Fungi - 197; Plants - 1853; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 407.0) no description available & (p41510|pme_brana : 389.0) Probable pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Brassica napus (Rape) & (reliability: 880.0) & (original description: Putative PME4, Description = Pectinesterase 4, PFAM = PF04043;PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.5scaffold4241_33245-37906' '(at2g26450 : 308.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G33230.1); Has 3076 Blast hits to 3004 proteins in 379 species: Archae - 6; Bacteria - 701; Metazoa - 5; Fungi - 205; Plants - 2131; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|85238 : 288.0) no description available & (q43111|pme3_phavu : 245.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 616.0) & (original description: Putative PME28, Description = Pectinesterase, PFAM = PF01095;PF04043)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.5scaffold4619_1554-6760' '(at5g53370 : 766.0) pectin methylesterase PCR fragment F (PMEPCRF); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G49220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 516.0) no description available & (q43062|pme_prupe : 456.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 1532.0) & (original description: Putative PME34, Description = Probable pectinesterase/pectinesterase inhibitor 34, PFAM = PF01095;PF04043)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.5scaffold6574_25673-29499' '(at5g04960 : 562.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: flower, root; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: root hair specific 12 (TAIR:AT3G10710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 492.0) no description available & (q43111|pme3_phavu : 477.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1124.0) & (original description: Putative PME46, Description = Probable pectinesterase/pectinesterase inhibitor 46, PFAM = PF01095;PF04043)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.5scaffold6576_91849-98432' '(at2g21610 : 376.0) pectinesterase 11 (PE11); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: N-terminal protein myristoylation, cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 2459 Blast hits to 2412 proteins in 316 species: Archae - 8; Bacteria - 608; Metazoa - 1; Fungi - 201; Plants - 1615; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 266.0) no description available & (q43062|pme_prupe : 166.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 752.0) & (original description: Putative PME11, Description = Putative pectinesterase 11, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'nbv0.5scaffold6795_6734-13428' '(at5g47500 : 540.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 234.0) no description available & (p83948|pme3_citsi : 152.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1080.0) & (original description: Putative PME68, Description = Probable pectinesterase 68, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00001373ctg013_57208-61310' '(at3g05610 : 478.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G27870.1); Has 12764 Blast hits to 3759 proteins in 499 species: Archae - 10; Bacteria - 1644; Metazoa - 570; Fungi - 815; Plants - 2126; Viruses - 67; Other Eukaryotes - 7532 (source: NCBI BLink). & (gnl|cdd|85238 : 468.0) no description available & (q42920|pme_medsa : 396.0) Pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) (P65) - Medicago sativa (Alfalfa) & (reliability: 956.0) & (original description: Putative PPE1, Description = Pectinesterase, PFAM = PF01095;PF04043)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00002392ctg004_622-6605' '(gnl|cdd|36477 : 472.0) no description available & (at4g12420 : 461.0) Encodes a protein of unknown function involved in directed root tip growth. It is a member of 19-member gene family and is distantly related structurally to the multiple-copper oxidases ascorbate oxidase and laccase, though it lacks the copper-binding domains. The protein is glycosylated and GPI-anchored. It is localized to the plasma membrane and the cell wall. The gene is expressed most strongly in expanding tissues.; SKU5; FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: cell tip growth; LOCATED IN: plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 2 (TAIR:AT5G51480.1). & (q00624|aso_brana : 399.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 134.0) no description available & (reliability: 858.0) & (original description: Putative sks3, Description = Multi-copper oxidase-like protein, PFAM = PF07731;PF07732;PF00394)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00005280ctg002_321-8288' '(at1g21850 : 291.0) SKU5 similar 8 (sks8); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 7 (TAIR:AT1G21860.1); Has 5145 Blast hits to 5091 proteins in 951 species: Archae - 16; Bacteria - 1604; Metazoa - 263; Fungi - 1857; Plants - 1262; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|36477 : 278.0) no description available & (q00624|aso_brana : 258.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 102.0) no description available & (reliability: 536.0) & (original description: Putative glysoja_017008, Description = Monocopper oxidase-like protein SKU5, PFAM = PF07732;PF00394;PF07731)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00005280ctg002_1192-8562' '(gnl|cdd|36477 : 443.0) no description available & (at5g48450 : 439.0) Encodes a protein with two DUF26 domains and a signal peptide for secretion. The protein is transported to the apoplast when it is expressed as a GFP fusion protein.; SKU5 similar 3 (sks3); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT4G12420.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q00624|aso_brana : 395.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 130.0) no description available & (reliability: 834.0) & (original description: Putative sks3, Description = Multi-copper oxidase-like protein, PFAM = PF07731;PF07732;PF00394)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00005957ctg005_11667-15683' '(at4g02300 : 518.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower, cultured cell; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02320.1); Has 2686 Blast hits to 2624 proteins in 317 species: Archae - 6; Bacteria - 574; Metazoa - 1; Fungi - 202; Plants - 1878; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|85238 : 517.0) no description available & (p83948|pme3_citsi : 469.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 940.0) & (original description: Putative PME39, Description = Probable pectinesterase/pectinesterase inhibitor 39, PFAM = PF04043;PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00009648ctg000_1545-4769' '(gnl|cdd|85238 : 379.0) no description available & (q43062|pme_prupe : 307.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (at3g43270 : 287.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: pectin methylesterase 44 (TAIR:AT4G33220.1); Has 2924 Blast hits to 2864 proteins in 331 species: Archae - 6; Bacteria - 617; Metazoa - 1; Fungi - 199; Plants - 2076; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 574.0) & (original description: Putative pme1, Description = Pectinesterase, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00013388ctg011_73-4055' '(at5g04960 : 583.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: flower, root; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: root hair specific 12 (TAIR:AT3G10710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 491.0) no description available & (q43111|pme3_phavu : 484.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1166.0) & (original description: Putative PME24, Description = Putative pectinesterase/pectinesterase inhibitor 24, PFAM = PF04043;PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00013968ctg008_23775-27818' '(gnl|cdd|85238 : 492.0) no description available & (at2g26450 : 470.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G33230.1); Has 3076 Blast hits to 3004 proteins in 379 species: Archae - 6; Bacteria - 701; Metazoa - 5; Fungi - 205; Plants - 2131; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (p83948|pme3_citsi : 433.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 940.0) & (original description: Putative PME13, Description = Probable pectinesterase/pectinesterase inhibitor 13, PFAM = PF01095;PF04043)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00014250ctg006_1-4047' '(at3g17060 : 249.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 2473 Blast hits to 2430 proteins in 320 species: Archae - 8; Bacteria - 629; Metazoa - 1; Fungi - 193; Plants - 1617; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|85238 : 148.0) no description available & (p83948|pme3_citsi : 107.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 498.0) & (original description: Putative PME10, Description = Pectinesterase, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00016578ctg009_2-3004' '(at5g09760 : 317.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G64640.1); Has 2807 Blast hits to 2761 proteins in 473 species: Archae - 6; Bacteria - 874; Metazoa - 1; Fungi - 174; Plants - 1725; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|85238 : 111.0) no description available & (p83218|pme_dauca : 81.3) Pectinesterase (EC 3.1.1.11) (Pectin methylesterase) (PE) - Daucus carota (Carrot) & (reliability: 634.0) & (original description: Putative PME51, Description = Pectinesterase, PFAM = PF04043;PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00019474ctg000_1-3925' '(at2g21610 : 436.0) pectinesterase 11 (PE11); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: N-terminal protein myristoylation, cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 2459 Blast hits to 2412 proteins in 316 species: Archae - 8; Bacteria - 608; Metazoa - 1; Fungi - 201; Plants - 1615; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 283.0) no description available & (p83948|pme3_citsi : 181.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 872.0) & (original description: Putative PME11, Description = Putative pectinesterase 11, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00026099ctg003_2560-7412' '(at1g02810 : 624.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02330.1); Has 2709 Blast hits to 2654 proteins in 327 species: Archae - 6; Bacteria - 603; Metazoa - 3; Fungi - 204; Plants - 1867; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 478.0) no description available & (q43062|pme_prupe : 364.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 1248.0) & (original description: Putative PME41, Description = Probable pectinesterase/pectinesterase inhibitor 41, PFAM = PF04043;PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00028198ctg002_6646-12271' '(at1g76160 : 819.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 617.0) no description available & (p29162|ntp3_tobac : 580.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84744 : 144.0) no description available & (reliability: 1552.0) & (original description: Putative sks5, Description = AT1G76160 protein, PFAM = PF07731;PF07732;PF00394)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00028683ctg000_1-1441' '(at5g53370 : 410.0) pectin methylesterase PCR fragment F (PMEPCRF); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G49220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 378.0) no description available & (q43062|pme_prupe : 307.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 820.0) & (original description: Putative pme2, Description = Pectinesterase, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben044scf00035242ctg008_1-4901' '(at3g05620 : 712.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: shoot, leaf apex, hypocotyl, flower, pollen tube; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G43270.1); Has 2961 Blast hits to 2901 proteins in 339 species: Archae - 6; Bacteria - 635; Metazoa - 1; Fungi - 198; Plants - 2096; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|85238 : 488.0) no description available & (q43062|pme_prupe : 475.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 1424.0) & (original description: Putative PME22, Description = Putative pectinesterase/pectinesterase inhibitor 22, PFAM = PF01095;PF04043)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf00094_36263-43372' '(at3g05610 : 494.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G27870.1); Has 12764 Blast hits to 3759 proteins in 499 species: Archae - 10; Bacteria - 1644; Metazoa - 570; Fungi - 815; Plants - 2126; Viruses - 67; Other Eukaryotes - 7532 (source: NCBI BLink). & (gnl|cdd|85238 : 435.0) no description available & (q42920|pme_medsa : 412.0) Pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) (P65) - Medicago sativa (Alfalfa) & (reliability: 988.0) & (original description: Putative per, Description = Pectinesterase, PFAM = PF04043;PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf00176_1017072-1021195' '(at1g11580 : 648.0) methylesterase PCR A (PMEPCRA); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase inhibitor (InterPro:IPR006501), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT1G11590.1); Has 3127 Blast hits to 3075 proteins in 484 species: Archae - 6; Bacteria - 913; Metazoa - 1; Fungi - 197; Plants - 1984; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 536.0) no description available & (p83948|pme3_citsi : 469.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1296.0) & (original description: Putative pme1, Description = Pectinesterase, PFAM = PF04043;PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf00240_381895-386953' '(at1g53840 : 641.0) encodes a pectin methylesterase; pectin methylesterase 1 (PME1); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: extracellular region, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: pectinesterase family protein (TAIR:AT3G14300.1); Has 3031 Blast hits to 2961 proteins in 324 species: Archae - 8; Bacteria - 582; Metazoa - 1; Fungi - 194; Plants - 2221; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (q43111|pme3_phavu : 637.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|85238 : 464.0) no description available & (reliability: 1282.0) & (original description: Putative MPE3, Description = Pectinesterase 3, PFAM = PF01095;PF04043)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf00342_63936-74582' '(gnl|cdd|85238 : 416.0) no description available & (at2g26450 : 412.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G33230.1); Has 3076 Blast hits to 3004 proteins in 379 species: Archae - 6; Bacteria - 701; Metazoa - 5; Fungi - 205; Plants - 2131; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (p83948|pme3_citsi : 334.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 824.0) & (original description: Putative Sb07g022100, Description = Pectinesterase, PFAM = PF04043;PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf00369_1880587-1885435' '(at5g27870 : 555.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G05610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 475.0) no description available & (q42920|pme_medsa : 397.0) Pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) (P65) - Medicago sativa (Alfalfa) & (reliability: 1110.0) & (original description: Putative PME21, Description = Probable pectinesterase/pectinesterase inhibitor 21, PFAM = PF01095;PF04043)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf00446_654508-660350' '(at5g09760 : 668.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G64640.1); Has 2807 Blast hits to 2761 proteins in 473 species: Archae - 6; Bacteria - 874; Metazoa - 1; Fungi - 174; Plants - 1725; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|85238 : 402.0) no description available & (o04887|pme2_citsi : 283.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 1336.0) & (original description: Putative PME51, Description = Probable pectinesterase/pectinesterase inhibitor 51, PFAM = PF04043;PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf00454_544103-549785' '(at5g07410 : 400.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G69940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85238 : 245.0) no description available & (p83948|pme3_citsi : 169.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 800.0) & (original description: Putative PME2, Description = Pectinesterase, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf00465_324926-329024' '(at2g47030 : 370.0) VGDH1; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: male gametophyte, flower, pollen tube; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT2G47040.1); Has 2990 Blast hits to 2923 proteins in 471 species: Archae - 6; Bacteria - 907; Metazoa - 1; Fungi - 197; Plants - 1853; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 368.0) no description available & (p41510|pme_brana : 353.0) Probable pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Brassica napus (Rape) & (reliability: 740.0) & (original description: Putative PGSC0003DMG400005208, Description = Pectinesterase, PFAM = PF04043;PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf00792_73387-92038' '(gnl|cdd|36477 : 301.0) no description available & (at5g66920 : 289.0) SKU5 similar 17 (sks17); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: response to karrikin; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 15 (TAIR:AT4G37160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q00624|aso_brana : 259.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 104.0) no description available & (reliability: 546.0) & (original description: Putative BnaA07g12260D, Description = Monocopper oxidase-like protein SKU5, PFAM = PF00394;PF07731;PF07732)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf00893_98080-102144' '(at2g21610 : 430.0) pectinesterase 11 (PE11); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: N-terminal protein myristoylation, cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 2459 Blast hits to 2412 proteins in 316 species: Archae - 8; Bacteria - 608; Metazoa - 1; Fungi - 201; Plants - 1615; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 281.0) no description available & (p83218|pme_dauca : 186.0) Pectinesterase (EC 3.1.1.11) (Pectin methylesterase) (PE) - Daucus carota (Carrot) & (reliability: 860.0) & (original description: Putative PME11, Description = Putative pectinesterase 11, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf01022_264706-279461' '(at3g17060 : 440.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 2473 Blast hits to 2430 proteins in 320 species: Archae - 8; Bacteria - 629; Metazoa - 1; Fungi - 193; Plants - 1617; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|85238 : 249.0) no description available & (p83948|pme3_citsi : 167.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 880.0) & (original description: Putative PME67, Description = Probable pectinesterase 67, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf01559_162944-172533' '(at1g05310 : 392.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G36710.1); Has 4576 Blast hits to 3466 proteins in 439 species: Archae - 11; Bacteria - 724; Metazoa - 994; Fungi - 355; Plants - 1773; Viruses - 6; Other Eukaryotes - 713 (source: NCBI BLink). & (gnl|cdd|85238 : 243.0) no description available & (p83218|pme_dauca : 140.0) Pectinesterase (EC 3.1.1.11) (Pectin methylesterase) (PE) - Daucus carota (Carrot) & (reliability: 784.0) & (original description: Putative PME3, Description = Pectinesterase, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf01623_205927-213512' '(at4g02320 : 533.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02300.1); Has 2764 Blast hits to 2709 proteins in 322 species: Archae - 6; Bacteria - 570; Metazoa - 1; Fungi - 200; Plants - 1958; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|85238 : 512.0) no description available & (p83948|pme3_citsi : 508.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 972.0) & (original description: Putative PME40, Description = Probable pectinesterase/pectinesterase inhibitor 40, PFAM = PF01095;PF04043)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf01773_502677-506546' '(at2g47030 : 395.0) VGDH1; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: male gametophyte, flower, pollen tube; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT2G47040.1); Has 2990 Blast hits to 2923 proteins in 471 species: Archae - 6; Bacteria - 907; Metazoa - 1; Fungi - 197; Plants - 1853; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (p41510|pme_brana : 367.0) Probable pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Brassica napus (Rape) & (gnl|cdd|85238 : 352.0) no description available & (reliability: 790.0) & (original description: Putative PME4, Description = Pectinesterase 4, PFAM = PF01095;PF04043)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf01927_380119-387528' '(at5g19730 : 578.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall, cytoplasm; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G36710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 293.0) no description available & (p83948|pme3_citsi : 184.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1156.0) & (original description: Putative PME53, Description = Probable pectinesterase 53, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf02066_629518-633624' '(at5g49180 : 554.0) Encodes a putative pectin methylesterase. The gene is preferentially expressed in floral buds.; Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, developing seed stage, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G06830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 493.0) no description available & (q42920|pme_medsa : 439.0) Pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) (P65) - Medicago sativa (Alfalfa) & (reliability: 1108.0) & (original description: Putative PME58, Description = Probable pectinesterase/pectinesterase inhibitor 58, PFAM = PF04043;PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf02111_1618250-1625810' '(at3g17060 : 429.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 2473 Blast hits to 2430 proteins in 320 species: Archae - 8; Bacteria - 629; Metazoa - 1; Fungi - 193; Plants - 1617; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|85238 : 249.0) no description available & (p83948|pme3_citsi : 170.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 858.0) & (original description: Putative PME67, Description = Probable pectinesterase 67, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf02125_206173-209289' '(gnl|cdd|85238 : 379.0) no description available & (q43062|pme_prupe : 291.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (at3g05620 : 290.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: shoot, leaf apex, hypocotyl, flower, pollen tube; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G43270.1); Has 2961 Blast hits to 2901 proteins in 339 species: Archae - 6; Bacteria - 635; Metazoa - 1; Fungi - 198; Plants - 2096; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 580.0) & (original description: Putative PGSC0003DMG400019198, Description = Pectinesterase, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf02502_1020511-1031870' '(at2g36710 : 434.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G36700.1); Has 6628 Blast hits to 4257 proteins in 552 species: Archae - 11; Bacteria - 922; Metazoa - 2127; Fungi - 511; Plants - 1794; Viruses - 17; Other Eukaryotes - 1246 (source: NCBI BLink). & (gnl|cdd|85238 : 282.0) no description available & (q43062|pme_prupe : 172.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 868.0) & (original description: Putative PME15, Description = Probable pectinesterase 15, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf02502_1020996-1031891' '(at2g36710 : 429.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G36700.1); Has 6628 Blast hits to 4257 proteins in 552 species: Archae - 11; Bacteria - 922; Metazoa - 2127; Fungi - 511; Plants - 1794; Viruses - 17; Other Eukaryotes - 1246 (source: NCBI BLink). & (gnl|cdd|85238 : 281.0) no description available & (q43062|pme_prupe : 171.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 858.0) & (original description: Putative PME14, Description = Putative pectinesterase 14, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf02807_1009744-1015125' '(at1g05310 : 482.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G36710.1); Has 4576 Blast hits to 3466 proteins in 439 species: Archae - 11; Bacteria - 724; Metazoa - 994; Fungi - 355; Plants - 1773; Viruses - 6; Other Eukaryotes - 713 (source: NCBI BLink). & (gnl|cdd|85238 : 270.0) no description available & (p83948|pme3_citsi : 155.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 964.0) & (original description: Putative PME8, Description = Probable pectinesterase 8, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf02830_169655-174406' '(at5g04960 : 540.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: flower, root; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: root hair specific 12 (TAIR:AT3G10710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 502.0) no description available & (q43111|pme3_phavu : 460.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1080.0) & (original description: Putative PME46, Description = Probable pectinesterase/pectinesterase inhibitor 46, PFAM = PF01095;PF04043)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf02864_1180961-1190325' '(gnl|cdd|85238 : 407.0) no description available & (at2g26440 : 310.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02330.1); Has 2898 Blast hits to 2847 proteins in 362 species: Archae - 6; Bacteria - 671; Metazoa - 1; Fungi - 192; Plants - 2003; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (o04887|pme2_citsi : 306.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 620.0) & (original description: Putative pme5, Description = Pectinesterase, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf02930_22790-29378' '(at3g10720 : 649.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G04970.1); Has 4750 Blast hits to 3228 proteins in 426 species: Archae - 6; Bacteria - 642; Metazoa - 199; Fungi - 573; Plants - 2288; Viruses - 376; Other Eukaryotes - 666 (source: NCBI BLink). & (gnl|cdd|85238 : 474.0) no description available & (q43062|pme_prupe : 394.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 1298.0) & (original description: Putative PME25, Description = Probable pectinesterase/pectinesterase inhibitor 25, PFAM = PF04043;PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf02949_1542678-1547024' '(at4g02330 : 549.0) ATPMEPCRB; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system, cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT1G02810.1); Has 2755 Blast hits to 2700 proteins in 321 species: Archae - 8; Bacteria - 597; Metazoa - 1; Fungi - 199; Plants - 1923; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|85238 : 490.0) no description available & (o04887|pme2_citsi : 424.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 1098.0) & (original description: Putative PME41, Description = Probable pectinesterase/pectinesterase inhibitor 41, PFAM = PF01095;PF04043)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf03046_284035-290555' '(at2g36710 : 439.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G36700.1); Has 6628 Blast hits to 4257 proteins in 552 species: Archae - 11; Bacteria - 922; Metazoa - 2127; Fungi - 511; Plants - 1794; Viruses - 17; Other Eukaryotes - 1246 (source: NCBI BLink). & (gnl|cdd|85238 : 295.0) no description available & (q43062|pme_prupe : 180.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 878.0) & (original description: Putative PME15, Description = Probable pectinesterase 15, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf03091_80483-86456' '(at5g47500 : 540.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 235.0) no description available & (p83948|pme3_citsi : 153.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1080.0) & (original description: Putative PME68, Description = Probable pectinesterase 68, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf03129_802772-807042' '(at5g27870 : 562.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G05610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 497.0) no description available & (q42920|pme_medsa : 428.0) Pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) (P65) - Medicago sativa (Alfalfa) & (reliability: 1124.0) & (original description: Putative PME58, Description = Probable pectinesterase/pectinesterase inhibitor 58, PFAM = PF04043;PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf03141_1112722-1118204' '(at1g76160 : 807.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 607.0) no description available & (q00624|aso_brana : 542.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 138.0) no description available & (reliability: 1592.0) & (original description: Putative sks5, Description = AT1G76160 protein, PFAM = PF07731;PF07732;PF00394)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf03203_779804-784505' '(at5g09760 : 624.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G64640.1); Has 2807 Blast hits to 2761 proteins in 473 species: Archae - 6; Bacteria - 874; Metazoa - 1; Fungi - 174; Plants - 1725; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|85238 : 398.0) no description available & (o04887|pme2_citsi : 316.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 1248.0) & (original description: Putative PGSC0003DMG400031349, Description = Pectinesterase, PFAM = PF01095;PF04043)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf03488_918685-925484' '(at3g24130 : 325.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G18990.1); Has 2445 Blast hits to 2405 proteins in 321 species: Archae - 8; Bacteria - 618; Metazoa - 1; Fungi - 193; Plants - 1599; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 245.0) no description available & (p83948|pme3_citsi : 145.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 650.0) & (original description: Putative PME29, Description = Probable pectinesterase 29, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf03595_1548643-1552532' '(at5g04960 : 585.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: flower, root; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: root hair specific 12 (TAIR:AT3G10710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 498.0) no description available & (q43111|pme3_phavu : 481.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1170.0) & (original description: Putative PME46, Description = Probable pectinesterase/pectinesterase inhibitor 46, PFAM = PF01095;PF04043)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf03706_180131-191172' '(gnl|cdd|85238 : 534.0) no description available & (at4g02320 : 531.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02300.1); Has 2764 Blast hits to 2709 proteins in 322 species: Archae - 6; Bacteria - 570; Metazoa - 1; Fungi - 200; Plants - 1958; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (p83948|pme3_citsi : 522.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1006.0) & (original description: Putative PME40, Description = Probable pectinesterase/pectinesterase inhibitor 40, PFAM = PF04043;PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf03823_146027-152333' '(p83948|pme3_citsi : 833.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (at3g14310 : 810.0) encodes a pectin methylesterase, targeted by a cellulose binding protein (CBP) from the parasitic nematode Heterodera schachtii during parasitism.; pectin methylesterase 3 (PME3); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: response to nematode; LOCATED IN: cell wall, apoplast, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: pectin methylesterase 2 (TAIR:AT1G53830.1); Has 3052 Blast hits to 2982 proteins in 347 species: Archae - 6; Bacteria - 639; Metazoa - 1; Fungi - 199; Plants - 2181; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 543.0) no description available & (reliability: 1620.0) & (original description: Putative PMEU1, Description = Pectinesterase/pectinesterase inhibitor U1, PFAM = PF04043;PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf03823_163066-167878' '(q43111|pme3_phavu : 632.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Phaseolus vulgaris (Kidney bean) (French bean) & (at1g53840 : 626.0) encodes a pectin methylesterase; pectin methylesterase 1 (PME1); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: extracellular region, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: pectinesterase family protein (TAIR:AT3G14300.1); Has 3031 Blast hits to 2961 proteins in 324 species: Archae - 8; Bacteria - 582; Metazoa - 1; Fungi - 194; Plants - 2221; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|85238 : 469.0) no description available & (reliability: 1252.0) & (original description: Putative MPE3, Description = Pectinesterase 3, PFAM = PF04043;PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf04081_192589-199032' '(at5g04960 : 542.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: flower, root; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: root hair specific 12 (TAIR:AT3G10710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 502.0) no description available & (q43111|pme3_phavu : 461.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1084.0) & (original description: Putative PME46, Description = Probable pectinesterase/pectinesterase inhibitor 46, PFAM = PF04043;PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf04113_706061-710356' '(at2g21610 : 372.0) pectinesterase 11 (PE11); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: N-terminal protein myristoylation, cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 2459 Blast hits to 2412 proteins in 316 species: Archae - 8; Bacteria - 608; Metazoa - 1; Fungi - 201; Plants - 1615; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 262.0) no description available & (q43062|pme_prupe : 163.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 744.0) & (original description: Putative PME11, Description = Putative pectinesterase 11, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf04711_103725-111530' '(at1g76160 : 874.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 616.0) no description available & (p29162|ntp3_tobac : 578.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84744 : 146.0) no description available & (reliability: 1706.0) & (original description: Putative sks7, Description = SKU5 similar 7 protein, PFAM = PF07731;PF00394;PF07732)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf05062_95325-99641' '(at2g26440 : 606.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02330.1); Has 2898 Blast hits to 2847 proteins in 362 species: Archae - 6; Bacteria - 671; Metazoa - 1; Fungi - 192; Plants - 2003; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|85238 : 475.0) no description available & (q43062|pme_prupe : 375.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 1212.0) & (original description: Putative PME12, Description = Probable pectinesterase/pectinesterase inhibitor 12, PFAM = PF01095;PF04043)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf05385_250978-258812' '(at1g76160 : 874.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 614.0) no description available & (q00624|aso_brana : 574.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 146.0) no description available & (reliability: 1706.0) & (original description: Putative sks5, Description = AT1G76160 protein, PFAM = PF00394;PF07731;PF07732)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf05551_438840-441667' '(at1g53840 : 122.0) encodes a pectin methylesterase; pectin methylesterase 1 (PME1); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: extracellular region, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: pectinesterase family protein (TAIR:AT3G14300.1); Has 3031 Blast hits to 2961 proteins in 324 species: Archae - 8; Bacteria - 582; Metazoa - 1; Fungi - 194; Plants - 2221; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|86518 : 101.0) no description available & (q43111|pme3_phavu : 97.1) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 244.0) & (original description: Putative PGSC0003DMG400018145, Description = Pectinesterase, PFAM = PF04043)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf05772_89510-92869' '(at5g55590 : 390.0) Encodes a protein with pectin methylesterase activity. No change in activity were detected in mutants defective in this gene, which was interpreted as a result of redundancy of product function with other pectin methylesterases. The gene product is required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation.; QUARTET 1 (QRT1); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: pectin catabolic process; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 5 post anthesis, sepals enclosing floral bud, petal differentiation and expansion stage, fruit development stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G47500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 264.0) no description available & (p83948|pme3_citsi : 165.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 780.0) & (original description: Putative QRT1, Description = Pectinesterase QRT1, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf06412_354901-375933' '(at5g19730 : 305.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall, cytoplasm; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G36710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 293.0) no description available & (p83948|pme3_citsi : 186.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 610.0) & (original description: Putative PME53, Description = Probable pectinesterase 53, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf06556_1139590-1144527' '(at3g05610 : 474.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G27870.1); Has 12764 Blast hits to 3759 proteins in 499 species: Archae - 10; Bacteria - 1644; Metazoa - 570; Fungi - 815; Plants - 2126; Viruses - 67; Other Eukaryotes - 7532 (source: NCBI BLink). & (gnl|cdd|85238 : 471.0) no description available & (q42920|pme_medsa : 395.0) Pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) (P65) - Medicago sativa (Alfalfa) & (reliability: 948.0) & (original description: Putative PPE1, Description = Pectinesterase, PFAM = PF01095;PF04043)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf06556_1210660-1214707' '(at5g27870 : 561.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G05610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 491.0) no description available & (q42920|pme_medsa : 454.0) Pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) (P65) - Medicago sativa (Alfalfa) & (reliability: 1122.0) & (original description: Putative per, Description = Pectinesterase, PFAM = PF01095;PF04043)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf06639_176569-181841' '(at5g53370 : 766.0) pectin methylesterase PCR fragment F (PMEPCRF); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G49220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 513.0) no description available & (p83948|pme3_citsi : 456.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1532.0) & (original description: Putative pme2, Description = Pectinesterase, PFAM = PF04043;PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf06650_26318-31211' '(at1g02810 : 652.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02330.1); Has 2709 Blast hits to 2654 proteins in 327 species: Archae - 6; Bacteria - 603; Metazoa - 3; Fungi - 204; Plants - 1867; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 482.0) no description available & (o04887|pme2_citsi : 363.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 1304.0) & (original description: Putative PME41, Description = Probable pectinesterase/pectinesterase inhibitor 41, PFAM = PF04043;PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf06954_400085-406497' '(at3g24130 : 369.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G18990.1); Has 2445 Blast hits to 2405 proteins in 321 species: Archae - 8; Bacteria - 618; Metazoa - 1; Fungi - 193; Plants - 1599; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 240.0) no description available & (p83948|pme3_citsi : 164.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 738.0) & (original description: Putative PME29, Description = Probable pectinesterase 29, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf07034_984147-987837' '(at5g19730 : 460.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall, cytoplasm; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G36710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 280.0) no description available & (p83948|pme3_citsi : 179.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 920.0) & (original description: Putative PME53, Description = Probable pectinesterase 53, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf07304_61788-69140' '(at4g33220 : 629.0) pectin methylesterase 44 (PME44); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G43270.1); Has 2773 Blast hits to 2721 proteins in 324 species: Archae - 6; Bacteria - 597; Metazoa - 1; Fungi - 196; Plants - 1948; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (q43062|pme_prupe : 626.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (gnl|cdd|85238 : 508.0) no description available & (reliability: 1258.0) & (original description: Putative pme1, Description = Pectinesterase, PFAM = PF04043;PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf07680_275154-280119' '(at2g26450 : 417.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G33230.1); Has 3076 Blast hits to 3004 proteins in 379 species: Archae - 6; Bacteria - 701; Metazoa - 5; Fungi - 205; Plants - 2131; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|85238 : 417.0) no description available & (p83948|pme3_citsi : 333.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 834.0) & (original description: Putative PME45, Description = Putative pectinesterase/pectinesterase inhibitor 45, PFAM = PF01095;PF04043)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf08047_296441-332148' '(at1g76160 : 826.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 619.0) no description available & (p29162|ntp3_tobac : 583.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84744 : 143.0) no description available & (reliability: 1566.0) & (original description: Putative sks5, Description = AT1G76160 protein, PFAM = PF07731;PF07732;PF00394)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf08723_116967-120622' '(gnl|cdd|85238 : 314.0) no description available & (at4g02300 : 266.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower, cultured cell; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02320.1); Has 2686 Blast hits to 2624 proteins in 317 species: Archae - 6; Bacteria - 574; Metazoa - 1; Fungi - 202; Plants - 1878; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (o04887|pme2_citsi : 238.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 498.0) & (original description: Putative PGSC0003DMG400045287, Description = Pectinesterase, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf09345_6918-10428' '(gnl|cdd|85238 : 317.0) no description available & (at4g02320 : 269.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02300.1); Has 2764 Blast hits to 2709 proteins in 322 species: Archae - 6; Bacteria - 570; Metazoa - 1; Fungi - 200; Plants - 1958; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (o04887|pme2_citsi : 244.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 500.0) & (original description: Putative PGSC0003DMG400045287, Description = Pectinesterase, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf09513_4471-14743' '(at3g29090 : 555.0) Encodes an atypical pectin methylesterase that does not require salt for its activity and has a blockwise mode of pectin demethylesterification.; pectin methylesterase 31 (PME31); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: pectin metabolic process; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 2575 Blast hits to 2532 proteins in 376 species: Archae - 8; Bacteria - 733; Metazoa - 1; Fungi - 195; Plants - 1611; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|85238 : 277.0) no description available & (p83218|pme_dauca : 182.0) Pectinesterase (EC 3.1.1.11) (Pectin methylesterase) (PE) - Daucus carota (Carrot) & (reliability: 1110.0) & (original description: Putative PME31, Description = Pectinesterase 31, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf10541_47791-52071' '(at1g11580 : 631.0) methylesterase PCR A (PMEPCRA); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase inhibitor (InterPro:IPR006501), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT1G11590.1); Has 3127 Blast hits to 3075 proteins in 484 species: Archae - 6; Bacteria - 913; Metazoa - 1; Fungi - 197; Plants - 1984; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 537.0) no description available & (p83948|pme3_citsi : 457.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1262.0) & (original description: Putative pme1, Description = Pectinesterase, PFAM = PF01095;PF04043)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf10737_595-6381' '(at3g24130 : 360.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G18990.1); Has 2445 Blast hits to 2405 proteins in 321 species: Archae - 8; Bacteria - 618; Metazoa - 1; Fungi - 193; Plants - 1599; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 214.0) no description available & (p41510|pme_brana : 145.0) Probable pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Brassica napus (Rape) & (reliability: 720.0) & (original description: Putative PME29, Description = Probable pectinesterase 29, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf11177_70792-79299' '(at5g53370 : 749.0) pectin methylesterase PCR fragment F (PMEPCRF); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G49220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 526.0) no description available & (p83948|pme3_citsi : 453.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1498.0) & (original description: Putative PME61, Description = Probable pectinesterase/pectinesterase inhibitor 61, PFAM = PF04043;PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf11289_56932-60012' '(gnl|cdd|85238 : 355.0) no description available & (q43062|pme_prupe : 286.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (at2g26440 : 277.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02330.1); Has 2898 Blast hits to 2847 proteins in 362 species: Archae - 6; Bacteria - 671; Metazoa - 1; Fungi - 192; Plants - 2003; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 554.0) & (original description: Putative pme1, Description = Pectinesterase, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf11490_52776-59895' '(at1g11580 : 551.0) methylesterase PCR A (PMEPCRA); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase inhibitor (InterPro:IPR006501), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT1G11590.1); Has 3127 Blast hits to 3075 proteins in 484 species: Archae - 6; Bacteria - 913; Metazoa - 1; Fungi - 197; Plants - 1984; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 544.0) no description available & (q43062|pme_prupe : 464.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 1102.0) & (original description: Putative pme1, Description = Pectinesterase, PFAM = PF01095;PF04043)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf12339_11051-17081' '(p83948|pme3_citsi : 771.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (at3g14310 : 724.0) encodes a pectin methylesterase, targeted by a cellulose binding protein (CBP) from the parasitic nematode Heterodera schachtii during parasitism.; pectin methylesterase 3 (PME3); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: response to nematode; LOCATED IN: cell wall, apoplast, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: pectin methylesterase 2 (TAIR:AT1G53830.1); Has 3052 Blast hits to 2982 proteins in 347 species: Archae - 6; Bacteria - 639; Metazoa - 1; Fungi - 199; Plants - 2181; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 539.0) no description available & (reliability: 1448.0) & (original description: Putative PMEU1, Description = Pectinesterase/pectinesterase inhibitor U1, PFAM = PF04043;PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf17294_32092-39102' '(at5g48450 : 390.0) Encodes a protein with two DUF26 domains and a signal peptide for secretion. The protein is transported to the apoplast when it is expressed as a GFP fusion protein.; SKU5 similar 3 (sks3); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT4G12420.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 390.0) no description available & (q00624|aso_brana : 340.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 129.0) no description available & (reliability: 750.0) & (original description: Putative sks3, Description = Multicopper oxidase, putative, PFAM = PF07732;PF07731;PF00394)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf17294_35163-40156' '(gnl|cdd|36477 : 319.0) no description available & (at1g21850 : 311.0) SKU5 similar 8 (sks8); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 7 (TAIR:AT1G21860.1); Has 5145 Blast hits to 5091 proteins in 951 species: Archae - 16; Bacteria - 1604; Metazoa - 263; Fungi - 1857; Plants - 1262; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (q00624|aso_brana : 273.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 105.0) no description available & (reliability: 608.0) & (original description: Putative sks3, Description = Monocopper oxidase-like protein SKU5, PFAM = PF07731;PF00394)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf18648_112477-116374' '(at5g55590 : 250.0) Encodes a protein with pectin methylesterase activity. No change in activity were detected in mutants defective in this gene, which was interpreted as a result of redundancy of product function with other pectin methylesterases. The gene product is required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation.; QUARTET 1 (QRT1); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: pectin catabolic process; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 5 post anthesis, sepals enclosing floral bud, petal differentiation and expansion stage, fruit development stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G47500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85238 : 166.0) no description available & (o04887|pme2_citsi : 113.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 500.0) & (original description: Putative PME2, Description = Pectinesterase, PFAM = PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf18704_124081-130851' '(at4g02320 : 521.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02300.1); Has 2764 Blast hits to 2709 proteins in 322 species: Archae - 6; Bacteria - 570; Metazoa - 1; Fungi - 200; Plants - 1958; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|85238 : 510.0) no description available & (p83948|pme3_citsi : 507.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 966.0) & (original description: Putative PME40, Description = Probable pectinesterase/pectinesterase inhibitor 40, PFAM = PF01095;PF04043)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf19584_15106-18893' '(at1g02810 : 655.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02330.1); Has 2709 Blast hits to 2654 proteins in 327 species: Archae - 6; Bacteria - 603; Metazoa - 3; Fungi - 204; Plants - 1867; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 480.0) no description available & (o04887|pme2_citsi : 383.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 1310.0) & (original description: Putative PME7, Description = Probable pectinesterase/pectinesterase inhibitor 7, PFAM = PF01095;PF04043)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf21138_147191-152169' '(at5g09760 : 714.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G64640.1); Has 2807 Blast hits to 2761 proteins in 473 species: Archae - 6; Bacteria - 874; Metazoa - 1; Fungi - 174; Plants - 1725; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|85238 : 414.0) no description available & (p83948|pme3_citsi : 298.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1428.0) & (original description: Putative PME51, Description = Probable pectinesterase/pectinesterase inhibitor 51, PFAM = PF04043;PF01095)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf34287_2302-7851' '(at4g22010 : 737.0) SKU5 similar 4 (sks4); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 5 (TAIR:AT1G76160.1); Has 5236 Blast hits to 5188 proteins in 961 species: Archae - 4; Bacteria - 1473; Metazoa - 274; Fungi - 2031; Plants - 1319; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|36477 : 600.0) no description available & (p29162|ntp3_tobac : 530.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|87357 : 141.0) no description available & (reliability: 1402.0) & (original description: Putative sks4, Description = L-ascorbate oxidase-like protein, PFAM = PF00394;PF07731;PF07732)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf34287_11700-16691' '(at1g76160 : 786.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 612.0) no description available & (q00624|aso_brana : 554.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 145.0) no description available & (reliability: 1502.0) & (original description: Putative sks4, Description = L-ascorbate oxidase-like protein, PFAM = PF00394;PF07731;PF07732)' T '10.8.1' 'cell wall.pectin*esterases.PME' 'niben101scf34798_75898-80063' '(at2g47030 : 444.0) VGDH1; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: male gametophyte, flower, pollen tube; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT2G47040.1); Has 2990 Blast hits to 2923 proteins in 471 species: Archae - 6; Bacteria - 907; Metazoa - 1; Fungi - 197; Plants - 1853; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85238 : 407.0) no description available & (p41510|pme_brana : 393.0) Probable pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Brassica napus (Rape) & (reliability: 888.0) & (original description: Putative PME4, Description = Pectinesterase 4, PFAM = PF04043;PF01095)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'nbv0.3scaffold32310_6851-15551' '(at4g19410 : 151.0) Pectinacetylesterase family protein; FUNCTIONS IN: actin binding, carboxylesterase activity; INVOLVED IN: cytoskeleton organization; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963), Profilin/allergen (InterPro:IPR002097); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G45280.2). & (reliability: 302.0) & (original description: Putative F383_20995, Description = Putative heat shock factor, PFAM = PF00235)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'nbv0.3scaffold33294_7002-16640' '(at3g09410 : 530.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT3G09405.1); Has 546 Blast hits to 540 proteins in 92 species: Archae - 0; Bacteria - 46; Metazoa - 118; Fungi - 0; Plants - 293; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). & (gnl|cdd|39488 : 523.0) no description available & (gnl|cdd|66926 : 493.0) no description available & (reliability: 1060.0) & (original description: Putative PAE5, Description = Pectin acetylesterase 5, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'nbv0.3scaffold67124_645-6334' '(gnl|cdd|66926 : 357.0) no description available & (gnl|cdd|39488 : 346.0) no description available & (at4g19420 : 333.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 666.0) & (original description: Putative BnaC03g35940D, Description = BnaC03g35940D protein, PFAM = PF03283;PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'nbv0.5scaffold84_895510-902072' '(gnl|cdd|66926 : 339.0) no description available & (gnl|cdd|39488 : 332.0) no description available & (at4g19410 : 311.0) Pectinacetylesterase family protein; FUNCTIONS IN: actin binding, carboxylesterase activity; INVOLVED IN: cytoskeleton organization; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963), Profilin/allergen (InterPro:IPR002097); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G45280.2). & (reliability: 622.0) & (original description: Putative PAE1, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'nbv0.5scaffold257_239233-245988' '(gnl|cdd|66926 : 356.0) no description available & (gnl|cdd|39488 : 339.0) no description available & (at4g19420 : 335.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 670.0) & (original description: Putative In23, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'nbv0.5scaffold1526_329005-366653' '(gnl|cdd|66926 : 368.0) no description available & (at4g19420 : 350.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|39488 : 349.0) no description available & (reliability: 700.0) & (original description: Putative PAE8, Description = Pectin acetylesterase 8, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'nbv0.5scaffold6879_78109-84691' '(gnl|cdd|39488 : 637.0) no description available & (at5g26670 : 619.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT3G05910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66926 : 601.0) no description available & (reliability: 1238.0) & (original description: Putative PAE10, Description = Pectin acetylesterase 10, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben044scf00016300ctg002_6149-13525' '(gnl|cdd|66926 : 370.0) no description available & (gnl|cdd|39488 : 350.0) no description available & (at4g19420 : 344.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 688.0) & (original description: Putative PAE8, Description = Pectin acetylesterase 8, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben044scf00018253ctg011_7846-13561' '(gnl|cdd|66926 : 335.0) no description available & (gnl|cdd|39488 : 327.0) no description available & (at4g19410 : 309.0) Pectinacetylesterase family protein; FUNCTIONS IN: actin binding, carboxylesterase activity; INVOLVED IN: cytoskeleton organization; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963), Profilin/allergen (InterPro:IPR002097); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G45280.2). & (reliability: 618.0) & (original description: Putative PAE1, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben044scf00025713ctg003_1448-4234' '(gnl|cdd|66926 : 170.0) no description available & (gnl|cdd|39488 : 167.0) no description available & (at5g45280 : 164.0) Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 566 Blast hits to 560 proteins in 97 species: Archae - 2; Bacteria - 42; Metazoa - 118; Fungi - 0; Plants - 299; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative In23, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben044scf00044705ctg008_4049-8309' '(gnl|cdd|66926 : 453.0) no description available & (gnl|cdd|39488 : 439.0) no description available & (at4g19420 : 404.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 808.0) & (original description: Putative In23, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf00049_368396-372656' '(gnl|cdd|66926 : 382.0) no description available & (gnl|cdd|39488 : 367.0) no description available & (at4g19420 : 339.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 678.0) & (original description: Putative PAE7, Description = Pectin acetylesterase 7, PFAM = PF03283;PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf00049_368728-371753' '(gnl|cdd|66926 : 122.0) no description available & (gnl|cdd|39488 : 119.0) no description available & (at5g45280 : 110.0) Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 566 Blast hits to 560 proteins in 97 species: Archae - 2; Bacteria - 42; Metazoa - 118; Fungi - 0; Plants - 299; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative In23, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf00158_584392-592712' '(gnl|cdd|66926 : 354.0) no description available & (gnl|cdd|39488 : 346.0) no description available & (at4g19410 : 323.0) Pectinacetylesterase family protein; FUNCTIONS IN: actin binding, carboxylesterase activity; INVOLVED IN: cytoskeleton organization; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963), Profilin/allergen (InterPro:IPR002097); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G45280.2). & (reliability: 646.0) & (original description: Putative Os01g0892500, Description = Os01g0892500 protein, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf00158_587816-591788' '(gnl|cdd|66926 : 227.0) no description available & (gnl|cdd|39488 : 221.0) no description available & (at4g19410 : 219.0) Pectinacetylesterase family protein; FUNCTIONS IN: actin binding, carboxylesterase activity; INVOLVED IN: cytoskeleton organization; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963), Profilin/allergen (InterPro:IPR002097); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G45280.2). & (reliability: 438.0) & (original description: Putative In23, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf00672_297808-302493' '(gnl|cdd|39488 : 611.0) no description available & (at5g26670 : 595.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT3G05910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66926 : 584.0) no description available & (reliability: 1190.0) & (original description: Putative At3g05910, Description = Pectinacetylesterase family protein, PFAM = PF03283;PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf01274_84650-90002' '(gnl|cdd|66926 : 424.0) no description available & (gnl|cdd|39488 : 407.0) no description available & (at4g19420 : 395.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 790.0) & (original description: Putative PAE1, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf01585_261079-312137' '(at4g19420 : 511.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|66926 : 499.0) no description available & (gnl|cdd|39488 : 497.0) no description available & (reliability: 1022.0) & (original description: Putative PAE8, Description = Pectin acetylesterase 8, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf01585_294981-303572' '(at4g19400 : 187.0) Profilin family protein; FUNCTIONS IN: actin binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: actin cytoskeleton; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Profilin/allergen (InterPro:IPR002097); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative F383_20995, Description = Putative heat shock factor, PFAM = PF00235)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf02110_109127-111027' '(gnl|cdd|66926 : 143.0) no description available & (gnl|cdd|39488 : 142.0) no description available & (at4g19420 : 134.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative In23, Description = Pectin acetylesterase, family CE13, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf02435_238235-244875' '(gnl|cdd|66926 : 265.0) no description available & (gnl|cdd|39488 : 250.0) no description available & (at4g19420 : 248.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 496.0) & (original description: Putative In23, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf02486_553528-560485' '(gnl|cdd|39488 : 623.0) no description available & (at3g05910 : 615.0) Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G26670.1). & (gnl|cdd|66926 : 592.0) no description available & (reliability: 1230.0) & (original description: Putative PAE12, Description = Pectin acetylesterase 12, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf02714_803616-810044' '(gnl|cdd|39488 : 635.0) no description available & (at5g26670 : 614.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT3G05910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66926 : 600.0) no description available & (reliability: 1228.0) & (original description: Putative PAE5, Description = Pectin acetylesterase 5, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf02760_199640-241092' '(gnl|cdd|66926 : 168.0) no description available & (gnl|cdd|39488 : 163.0) no description available & (at4g19420 : 158.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative PAE1, Description = Pectinacetylesterase family protein, PFAM = PF03283;PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf03392_1111065-1115925' '(gnl|cdd|66926 : 371.0) no description available & (gnl|cdd|39488 : 356.0) no description available & (at4g19410 : 321.0) Pectinacetylesterase family protein; FUNCTIONS IN: actin binding, carboxylesterase activity; INVOLVED IN: cytoskeleton organization; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963), Profilin/allergen (InterPro:IPR002097); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G45280.2). & (reliability: 642.0) & (original description: Putative PAE7, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf04270_46494-60000' '(at5g23870 : 574.0) Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT3G62060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39488 : 535.0) no description available & (gnl|cdd|66926 : 476.0) no description available & (reliability: 1148.0) & (original description: Putative PAE9, Description = Pectin acetylesterase 9, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf05468_393320-395742' '(gnl|cdd|66926 : 95.5) no description available & (gnl|cdd|39488 : 92.7) no description available & (at4g19410 : 88.6) Pectinacetylesterase family protein; FUNCTIONS IN: actin binding, carboxylesterase activity; INVOLVED IN: cytoskeleton organization; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963), Profilin/allergen (InterPro:IPR002097); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G45280.2). & (reliability: 177.2) & (original description: Putative PGSC0003DMG400004527, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf05649_2414-7353' '(gnl|cdd|66926 : 367.0) no description available & (gnl|cdd|39488 : 351.0) no description available & (at4g19410 : 320.0) Pectinacetylesterase family protein; FUNCTIONS IN: actin binding, carboxylesterase activity; INVOLVED IN: cytoskeleton organization; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963), Profilin/allergen (InterPro:IPR002097); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G45280.2). & (reliability: 640.0) & (original description: Putative PAE7, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf07054_35621-41345' '(gnl|cdd|66926 : 563.0) no description available & (gnl|cdd|39488 : 557.0) no description available & (at4g19420 : 555.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 1110.0) & (original description: Putative PAE8, Description = Pectin acetylesterase 8, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf07346_393422-397764' '(gnl|cdd|66926 : 451.0) no description available & (gnl|cdd|39488 : 445.0) no description available & (at4g19420 : 438.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 876.0) & (original description: Putative PAE11, Description = Pectin acetylesterase 11, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf07346_393461-397473' '(gnl|cdd|66926 : 447.0) no description available & (gnl|cdd|39488 : 422.0) no description available & (at4g19420 : 416.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 832.0) & (original description: Putative In23, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf07346_459771-467058' '(gnl|cdd|66926 : 399.0) no description available & (gnl|cdd|39488 : 380.0) no description available & (at4g19420 : 343.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 686.0) & (original description: Putative PAE1, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf07405_585776-594695' '(at3g09410 : 530.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT3G09405.1); Has 546 Blast hits to 540 proteins in 92 species: Archae - 0; Bacteria - 46; Metazoa - 118; Fungi - 0; Plants - 293; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). & (gnl|cdd|39488 : 523.0) no description available & (gnl|cdd|66926 : 494.0) no description available & (reliability: 1060.0) & (original description: Putative PAE5, Description = Pectin acetylesterase 5, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf08273_439378-446360' '(gnl|cdd|66926 : 346.0) no description available & (gnl|cdd|39488 : 338.0) no description available & (at4g19410 : 317.0) Pectinacetylesterase family protein; FUNCTIONS IN: actin binding, carboxylesterase activity; INVOLVED IN: cytoskeleton organization; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963), Profilin/allergen (InterPro:IPR002097); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G45280.2). & (reliability: 634.0) & (original description: Putative PAE7, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf08565_21767-27336' '(at4g19420 : 604.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|66926 : 578.0) no description available & (gnl|cdd|39488 : 566.0) no description available & (reliability: 1208.0) & (original description: Putative PAE8, Description = Pectin acetylesterase 8, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf10055_574070-624383' '(gnl|cdd|66926 : 243.0) no description available & (gnl|cdd|39488 : 228.0) no description available & (at4g19420 : 224.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative In23, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf10055_619703-631407' '(gnl|cdd|66926 : 208.0) no description available & (gnl|cdd|39488 : 199.0) no description available & (at5g45280 : 191.0) Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 566 Blast hits to 560 proteins in 97 species: Archae - 2; Bacteria - 42; Metazoa - 118; Fungi - 0; Plants - 299; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative In23, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf10055_840169-847958' '(at4g19410 : 147.0) Pectinacetylesterase family protein; FUNCTIONS IN: actin binding, carboxylesterase activity; INVOLVED IN: cytoskeleton organization; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963), Profilin/allergen (InterPro:IPR002097); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G45280.2). & (reliability: 294.0) & (original description: Putative F383_20995, Description = Putative heat shock factor, PFAM = PF00235)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf10441_135769-141804' '(gnl|cdd|66926 : 390.0) no description available & (gnl|cdd|39488 : 376.0) no description available & (at4g19420 : 363.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 726.0) & (original description: Putative PAE2, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf12852_65389-73738' '(gnl|cdd|39488 : 627.0) no description available & (at3g05910 : 618.0) Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G26670.1). & (gnl|cdd|66926 : 595.0) no description available & (reliability: 1236.0) & (original description: Putative BnaC09g15790D, Description = BnaC09g15790D protein, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf13545_30926-33994' '(at4g19420 : 200.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|39488 : 193.0) no description available & (gnl|cdd|66926 : 189.0) no description available & (reliability: 400.0) & (original description: Putative In23, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf16716_53112-57481' '(gnl|cdd|66926 : 425.0) no description available & (gnl|cdd|39488 : 418.0) no description available & (at4g19420 : 393.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 786.0) & (original description: Putative In23, Description = Pectinacetylesterase family protein, PFAM = PF03283)' T '10.8.2' 'cell wall.pectin*esterases.acetyl esterase' 'niben101scf28761_10058-15233' '(at4g19420 : 550.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|66926 : 539.0) no description available & (gnl|cdd|39488 : 533.0) no description available & (reliability: 1100.0) & (original description: Putative PAE8, Description = Pectin acetylesterase 8, PFAM = PF03283)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'nbv0.3scaffold5504_37589-40176' '(gnl|cdd|85238 : 205.0) no description available & (at5g27870 : 169.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G05610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43062|pme_prupe : 147.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 316.0) & (original description: Putative pme2, Description = Pectinesterase, PFAM = PF01095)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'nbv0.3scaffold6755_51525-56935' '(at5g09760 : 615.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G64640.1); Has 2807 Blast hits to 2761 proteins in 473 species: Archae - 6; Bacteria - 874; Metazoa - 1; Fungi - 174; Plants - 1725; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|85238 : 399.0) no description available & (o04887|pme2_citsi : 296.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 1200.0) & (original description: Putative PGSC0003DMG400028674, Description = Pectinesterase, PFAM = PF01095;PF04043)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'nbv0.3scaffold25159_1320-9287' '(at1g21850 : 303.0) SKU5 similar 8 (sks8); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 7 (TAIR:AT1G21860.1); Has 5145 Blast hits to 5091 proteins in 951 species: Archae - 16; Bacteria - 1604; Metazoa - 263; Fungi - 1857; Plants - 1262; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|36477 : 288.0) no description available & (q00624|aso_brana : 262.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 103.0) no description available & (reliability: 564.0) & (original description: Putative glysoja_017008, Description = Monocopper oxidase-like protein SKU5, PFAM = PF07732;PF07731;PF00394)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'nbv0.5scaffold716_393908-403591' '(at3g60730 : 570.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase inhibitor (InterPro:IPR006501), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT2G45220.1); Has 2657 Blast hits to 2607 proteins in 332 species: Archae - 6; Bacteria - 615; Metazoa - 1; Fungi - 196; Plants - 1814; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|85238 : 487.0) no description available & (o04887|pme2_citsi : 420.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 1140.0) & (original description: Putative PME36, Description = Probable pectinesterase/pectinesterase inhibitor 36, PFAM = PF01095;PF04043)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben044scf00002392ctg004_622-6605' '(gnl|cdd|36477 : 472.0) no description available & (at4g12420 : 461.0) Encodes a protein of unknown function involved in directed root tip growth. It is a member of 19-member gene family and is distantly related structurally to the multiple-copper oxidases ascorbate oxidase and laccase, though it lacks the copper-binding domains. The protein is glycosylated and GPI-anchored. It is localized to the plasma membrane and the cell wall. The gene is expressed most strongly in expanding tissues.; SKU5; FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: cell tip growth; LOCATED IN: plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 2 (TAIR:AT5G51480.1). & (q00624|aso_brana : 399.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 134.0) no description available & (reliability: 920.0) & (original description: Putative sks3, Description = Multi-copper oxidase-like protein, PFAM = PF07731;PF07732;PF00394)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben044scf00005280ctg002_321-8288' '(at1g21850 : 291.0) SKU5 similar 8 (sks8); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 7 (TAIR:AT1G21860.1); Has 5145 Blast hits to 5091 proteins in 951 species: Archae - 16; Bacteria - 1604; Metazoa - 263; Fungi - 1857; Plants - 1262; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|36477 : 278.0) no description available & (q00624|aso_brana : 258.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 102.0) no description available & (reliability: 548.0) & (original description: Putative glysoja_017008, Description = Monocopper oxidase-like protein SKU5, PFAM = PF07732;PF00394;PF07731)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben044scf00005280ctg002_1192-8562' '(gnl|cdd|36477 : 443.0) no description available & (at5g48450 : 439.0) Encodes a protein with two DUF26 domains and a signal peptide for secretion. The protein is transported to the apoplast when it is expressed as a GFP fusion protein.; SKU5 similar 3 (sks3); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT4G12420.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q00624|aso_brana : 395.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 130.0) no description available & (reliability: 878.0) & (original description: Putative sks3, Description = Multi-copper oxidase-like protein, PFAM = PF07731;PF07732;PF00394)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben044scf00005957ctg005_11667-15683' '(at4g02300 : 518.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower, cultured cell; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02320.1); Has 2686 Blast hits to 2624 proteins in 317 species: Archae - 6; Bacteria - 574; Metazoa - 1; Fungi - 202; Plants - 1878; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|85238 : 517.0) no description available & (p83948|pme3_citsi : 469.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1036.0) & (original description: Putative PME39, Description = Probable pectinesterase/pectinesterase inhibitor 39, PFAM = PF04043;PF01095)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben044scf00009648ctg000_1545-4769' '(gnl|cdd|85238 : 379.0) no description available & (q43062|pme_prupe : 307.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (at3g43270 : 287.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: pectin methylesterase 44 (TAIR:AT4G33220.1); Has 2924 Blast hits to 2864 proteins in 331 species: Archae - 6; Bacteria - 617; Metazoa - 1; Fungi - 199; Plants - 2076; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative pme1, Description = Pectinesterase, PFAM = PF01095)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf00148_184590-189814' '(at5g51490 : 580.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G51500.1); Has 2839 Blast hits to 2789 proteins in 323 species: Archae - 6; Bacteria - 583; Metazoa - 1; Fungi - 196; Plants - 2021; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (o04887|pme2_citsi : 485.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (gnl|cdd|85238 : 435.0) no description available & (reliability: 1160.0) & (original description: Putative PME59, Description = Probable pectinesterase/pectinesterase inhibitor 59, PFAM = PF04043;PF01095)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf00446_654508-660350' '(at5g09760 : 668.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G64640.1); Has 2807 Blast hits to 2761 proteins in 473 species: Archae - 6; Bacteria - 874; Metazoa - 1; Fungi - 174; Plants - 1725; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|85238 : 402.0) no description available & (o04887|pme2_citsi : 283.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 1258.0) & (original description: Putative PME51, Description = Probable pectinesterase/pectinesterase inhibitor 51, PFAM = PF04043;PF01095)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf00792_73387-92038' '(gnl|cdd|36477 : 301.0) no description available & (at5g66920 : 289.0) SKU5 similar 17 (sks17); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: response to karrikin; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 15 (TAIR:AT4G37160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q00624|aso_brana : 259.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 104.0) no description available & (reliability: 572.0) & (original description: Putative BnaA07g12260D, Description = Monocopper oxidase-like protein SKU5, PFAM = PF00394;PF07731;PF07732)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf01623_205927-213512' '(at4g02320 : 533.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02300.1); Has 2764 Blast hits to 2709 proteins in 322 species: Archae - 6; Bacteria - 570; Metazoa - 1; Fungi - 200; Plants - 1958; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|85238 : 512.0) no description available & (p83948|pme3_citsi : 508.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1066.0) & (original description: Putative PME40, Description = Probable pectinesterase/pectinesterase inhibitor 40, PFAM = PF01095;PF04043)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf02125_206173-209289' '(gnl|cdd|85238 : 379.0) no description available & (q43062|pme_prupe : 291.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (at3g05620 : 290.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: shoot, leaf apex, hypocotyl, flower, pollen tube; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G43270.1); Has 2961 Blast hits to 2901 proteins in 339 species: Archae - 6; Bacteria - 635; Metazoa - 1; Fungi - 198; Plants - 2096; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative PGSC0003DMG400019198, Description = Pectinesterase, PFAM = PF01095)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf02864_1180961-1190325' '(gnl|cdd|85238 : 407.0) no description available & (at2g26440 : 310.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02330.1); Has 2898 Blast hits to 2847 proteins in 362 species: Archae - 6; Bacteria - 671; Metazoa - 1; Fungi - 192; Plants - 2003; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (o04887|pme2_citsi : 306.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 600.0) & (original description: Putative pme5, Description = Pectinesterase, PFAM = PF01095)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf02930_22790-29378' '(at3g10720 : 649.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G04970.1); Has 4750 Blast hits to 3228 proteins in 426 species: Archae - 6; Bacteria - 642; Metazoa - 199; Fungi - 573; Plants - 2288; Viruses - 376; Other Eukaryotes - 666 (source: NCBI BLink). & (gnl|cdd|85238 : 474.0) no description available & (q43062|pme_prupe : 394.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 1280.0) & (original description: Putative PME25, Description = Probable pectinesterase/pectinesterase inhibitor 25, PFAM = PF04043;PF01095)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf03203_779804-784505' '(at5g09760 : 624.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G64640.1); Has 2807 Blast hits to 2761 proteins in 473 species: Archae - 6; Bacteria - 874; Metazoa - 1; Fungi - 174; Plants - 1725; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|85238 : 398.0) no description available & (o04887|pme2_citsi : 316.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 1188.0) & (original description: Putative PGSC0003DMG400031349, Description = Pectinesterase, PFAM = PF01095;PF04043)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf03706_180131-191172' '(gnl|cdd|85238 : 534.0) no description available & (at4g02320 : 531.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02300.1); Has 2764 Blast hits to 2709 proteins in 322 species: Archae - 6; Bacteria - 570; Metazoa - 1; Fungi - 200; Plants - 1958; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (p83948|pme3_citsi : 522.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1062.0) & (original description: Putative PME40, Description = Probable pectinesterase/pectinesterase inhibitor 40, PFAM = PF04043;PF01095)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf04217_422446-427257' '(at3g47400 : 570.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: hypocotyl, flower, root, carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G51490.1); Has 3318 Blast hits to 3103 proteins in 411 species: Archae - 8; Bacteria - 807; Metazoa - 11; Fungi - 237; Plants - 1968; Viruses - 75; Other Eukaryotes - 212 (source: NCBI BLink). & (o04887|pme2_citsi : 519.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (gnl|cdd|85238 : 459.0) no description available & (reliability: 1140.0) & (original description: Putative PME33, Description = Probable pectinesterase/pectinesterase inhibitor 33, PFAM = PF04043;PF01095)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf04703_599470-604884' '(at3g60730 : 577.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase inhibitor (InterPro:IPR006501), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT2G45220.1); Has 2657 Blast hits to 2607 proteins in 332 species: Archae - 6; Bacteria - 615; Metazoa - 1; Fungi - 196; Plants - 1814; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|85238 : 491.0) no description available & (o04887|pme2_citsi : 426.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 1154.0) & (original description: Putative pme1, Description = Pectinesterase, PFAM = PF04043;PF01095)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf05030_322257-328455' '(at5g51490 : 587.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G51500.1); Has 2839 Blast hits to 2789 proteins in 323 species: Archae - 6; Bacteria - 583; Metazoa - 1; Fungi - 196; Plants - 2021; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (o04887|pme2_citsi : 499.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (gnl|cdd|85238 : 435.0) no description available & (reliability: 1174.0) & (original description: Putative PME59, Description = Probable pectinesterase/pectinesterase inhibitor 59, PFAM = PF01095;PF04043)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf05030_361962-366521' '(o04887|pme2_citsi : 664.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (at2g45220 : 650.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: membrane, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Carbohydrate-binding/sugar hydrolysis domain (InterPro:IPR006633), Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G51490.1); Has 2773 Blast hits to 2723 proteins in 340 species: Archae - 10; Bacteria - 616; Metazoa - 1; Fungi - 203; Plants - 1907; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|85238 : 506.0) no description available & (reliability: 1300.0) & (original description: Putative pme1, Description = Pectinesterase, PFAM = PF04043;PF01095)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf05407_128409-136394' '(at5g48450 : 800.0) Encodes a protein with two DUF26 domains and a signal peptide for secretion. The protein is transported to the apoplast when it is expressed as a GFP fusion protein.; SKU5 similar 3 (sks3); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT4G12420.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 572.0) no description available & (q00624|aso_brana : 457.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 151.0) no description available & (reliability: 1600.0) & (original description: Putative sks3, Description = Protein SKU5-like 3, PFAM = PF07731;PF07732;PF00394)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf08723_116967-120622' '(gnl|cdd|85238 : 314.0) no description available & (at4g02300 : 266.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower, cultured cell; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02320.1); Has 2686 Blast hits to 2624 proteins in 317 species: Archae - 6; Bacteria - 574; Metazoa - 1; Fungi - 202; Plants - 1878; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (o04887|pme2_citsi : 238.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 532.0) & (original description: Putative PGSC0003DMG400045287, Description = Pectinesterase, PFAM = PF01095)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf09345_6918-10428' '(gnl|cdd|85238 : 317.0) no description available & (at4g02320 : 269.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02300.1); Has 2764 Blast hits to 2709 proteins in 322 species: Archae - 6; Bacteria - 570; Metazoa - 1; Fungi - 200; Plants - 1958; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (o04887|pme2_citsi : 244.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 538.0) & (original description: Putative PGSC0003DMG400045287, Description = Pectinesterase, PFAM = PF01095)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf09665_206362-211502' '(o04887|pme2_citsi : 697.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (at2g45220 : 662.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: membrane, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Carbohydrate-binding/sugar hydrolysis domain (InterPro:IPR006633), Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G51490.1); Has 2773 Blast hits to 2723 proteins in 340 species: Archae - 10; Bacteria - 616; Metazoa - 1; Fungi - 203; Plants - 1907; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|85238 : 518.0) no description available & (reliability: 1324.0) & (original description: Putative pme1, Description = Pectinesterase, PFAM = PF04043;PF01095)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf11289_56932-60012' '(gnl|cdd|85238 : 355.0) no description available & (q43062|pme_prupe : 286.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (at2g26440 : 277.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02330.1); Has 2898 Blast hits to 2847 proteins in 362 species: Archae - 6; Bacteria - 671; Metazoa - 1; Fungi - 192; Plants - 2003; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 516.0) & (original description: Putative pme1, Description = Pectinesterase, PFAM = PF01095)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf11361_350040-354768' '(at3g60730 : 578.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase inhibitor (InterPro:IPR006501), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT2G45220.1); Has 2657 Blast hits to 2607 proteins in 332 species: Archae - 6; Bacteria - 615; Metazoa - 1; Fungi - 196; Plants - 1814; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|85238 : 489.0) no description available & (o04887|pme2_citsi : 428.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 1156.0) & (original description: Putative PME36, Description = Probable pectinesterase/pectinesterase inhibitor 36, PFAM = PF01095;PF04043)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf15657_266133-272829' '(at5g48450 : 806.0) Encodes a protein with two DUF26 domains and a signal peptide for secretion. The protein is transported to the apoplast when it is expressed as a GFP fusion protein.; SKU5 similar 3 (sks3); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT4G12420.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 569.0) no description available & (q00624|aso_brana : 479.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 154.0) no description available & (reliability: 1612.0) & (original description: Putative sks3, Description = Monocopper oxidase-like protein SKU5, PFAM = PF07731;PF00394;PF07732)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf17294_32092-39102' '(at5g48450 : 390.0) Encodes a protein with two DUF26 domains and a signal peptide for secretion. The protein is transported to the apoplast when it is expressed as a GFP fusion protein.; SKU5 similar 3 (sks3); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT4G12420.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 390.0) no description available & (q00624|aso_brana : 340.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 129.0) no description available & (reliability: 780.0) & (original description: Putative sks3, Description = Multicopper oxidase, putative, PFAM = PF07732;PF07731;PF00394)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf17294_35163-40156' '(gnl|cdd|36477 : 319.0) no description available & (at1g21850 : 311.0) SKU5 similar 8 (sks8); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 7 (TAIR:AT1G21860.1); Has 5145 Blast hits to 5091 proteins in 951 species: Archae - 16; Bacteria - 1604; Metazoa - 263; Fungi - 1857; Plants - 1262; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (q00624|aso_brana : 273.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 105.0) no description available & (reliability: 608.0) & (original description: Putative sks3, Description = Monocopper oxidase-like protein SKU5, PFAM = PF07731;PF00394)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf18704_124081-130851' '(at4g02320 : 521.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02300.1); Has 2764 Blast hits to 2709 proteins in 322 species: Archae - 6; Bacteria - 570; Metazoa - 1; Fungi - 200; Plants - 1958; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|85238 : 510.0) no description available & (p83948|pme3_citsi : 507.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1042.0) & (original description: Putative PME40, Description = Probable pectinesterase/pectinesterase inhibitor 40, PFAM = PF01095;PF04043)' T '10.8.99' 'cell wall.pectin*esterases.misc' 'niben101scf21138_147191-152169' '(at5g09760 : 714.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G64640.1); Has 2807 Blast hits to 2761 proteins in 473 species: Archae - 6; Bacteria - 874; Metazoa - 1; Fungi - 174; Plants - 1725; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|85238 : 414.0) no description available & (p83948|pme3_citsi : 298.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1288.0) & (original description: Putative PME51, Description = Probable pectinesterase/pectinesterase inhibitor 51, PFAM = PF04043;PF01095)' T '11' 'lipid metabolism' 'niben101scf01269_1688859-1694774' '(at3g20480 : 360.0) tetraacyldisaccharide 4'-kinase family protein; FUNCTIONS IN: tetraacyldisaccharide 4'-kinase activity, ATP binding; INVOLVED IN: lipid A biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: sepal, root, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Tetraacyldisaccharide 4'-kinase (InterPro:IPR003758). & (gnl|cdd|31849 : 148.0) no description available & (reliability: 720.0) & (original description: Putative LPXK, Description = Probable tetraacyldisaccharide 4'-kinase, mitochondrial, PFAM = PF02606)' T '11.1' 'lipid metabolism.FA synthesis and FA elongation' '' '' '11.1.1' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation' 'niben101scf04292_142918-151061' '(at3g56130 : 197.0) biotin/lipoyl attachment domain-containing protein; CONTAINS InterPro DOMAIN/s: Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Single hybrid motif superfamily protein (TAIR:AT3G15690.2). & (reliability: 394.0) & (original description: Putative At3g15690, Description = Biotin/lipoyl attachment domain-containing protein, PFAM = PF00364)' T '11.1.1' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation' 'niben101scf10152_298472-308639' '(at3g56130 : 188.0) biotin/lipoyl attachment domain-containing protein; CONTAINS InterPro DOMAIN/s: Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Single hybrid motif superfamily protein (TAIR:AT3G15690.2). & (reliability: 376.0) & (original description: Putative At3g56130, Description = AT3g56130/F18O21_90, PFAM = PF00364)' T '11.1.1.1' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.homomeric Enzyme' 'nbv0.5scaffold63_1247697-1263333' '(at1g36160 : 3751.0) Encodes acetyl-CoA carboxylase. Mutant displays uncoordinated cell divisions which are enhanced by cytokinins. Mutant also has aberrant organization of the apical region in the embryo and abnormal root and shoot development. Essential for very long chain fatty acid elongation.; acetyl-CoA carboxylase 1 (ACC1); CONTAINS InterPro DOMAIN/s: Acetyl-coenzyme A carboxyltransferase, N-terminal (InterPro:IPR011762), Carboxyl transferase (InterPro:IPR000022), Biotin/lipoyl attachment (InterPro:IPR000089), Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold (InterPro:IPR011761), Biotin carboxylase, C-terminal (InterPro:IPR005482), Single hybrid motif (InterPro:IPR011053), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), Acetyl-CoA carboxylase, central region (InterPro:IPR013537), Biotin carboxylation domain (InterPro:IPR011764), Biotin-binding site (InterPro:IPR001882), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Acetyl-coenzyme A carboxyltransferase, C-terminal (InterPro:IPR011763), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 2 (TAIR:AT1G36180.1). & (gnl|cdd|35589 : 2918.0) no description available & (gnl|cdd|87496 : 803.0) no description available & (q2qmg2|mcca_orysa : 214.0) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) - Oryza sativa (Rice) & (reliability: 7502.0) & (original description: Putative ACC1, Description = Acetyl-CoA carboxylase 1, PFAM = PF02786;PF00364;PF02785;PF01039;PF08326;PF00289)' T '11.1.1.1' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.homomeric Enzyme' 'niben101scf00960_1540317-1557025' '(at1g36160 : 3631.0) Encodes acetyl-CoA carboxylase. Mutant displays uncoordinated cell divisions which are enhanced by cytokinins. Mutant also has aberrant organization of the apical region in the embryo and abnormal root and shoot development. Essential for very long chain fatty acid elongation.; acetyl-CoA carboxylase 1 (ACC1); CONTAINS InterPro DOMAIN/s: Acetyl-coenzyme A carboxyltransferase, N-terminal (InterPro:IPR011762), Carboxyl transferase (InterPro:IPR000022), Biotin/lipoyl attachment (InterPro:IPR000089), Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold (InterPro:IPR011761), Biotin carboxylase, C-terminal (InterPro:IPR005482), Single hybrid motif (InterPro:IPR011053), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), Acetyl-CoA carboxylase, central region (InterPro:IPR013537), Biotin carboxylation domain (InterPro:IPR011764), Biotin-binding site (InterPro:IPR001882), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Acetyl-coenzyme A carboxyltransferase, C-terminal (InterPro:IPR011763), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 2 (TAIR:AT1G36180.1). & (gnl|cdd|35589 : 2896.0) no description available & (gnl|cdd|87496 : 770.0) no description available & (q2qmg2|mcca_orysa : 209.0) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) - Oryza sativa (Rice) & (reliability: 7262.0) & (original description: Putative ACC1, Description = Acetyl-CoA carboxylase 1, PFAM = PF02785;PF08326;PF00289;PF02786;PF00364;PF01039)' T '11.1.1.1' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.homomeric Enzyme' 'niben101scf05269_463399-479933' '(at1g36160 : 3695.0) Encodes acetyl-CoA carboxylase. Mutant displays uncoordinated cell divisions which are enhanced by cytokinins. Mutant also has aberrant organization of the apical region in the embryo and abnormal root and shoot development. Essential for very long chain fatty acid elongation.; acetyl-CoA carboxylase 1 (ACC1); CONTAINS InterPro DOMAIN/s: Acetyl-coenzyme A carboxyltransferase, N-terminal (InterPro:IPR011762), Carboxyl transferase (InterPro:IPR000022), Biotin/lipoyl attachment (InterPro:IPR000089), Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold (InterPro:IPR011761), Biotin carboxylase, C-terminal (InterPro:IPR005482), Single hybrid motif (InterPro:IPR011053), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), Acetyl-CoA carboxylase, central region (InterPro:IPR013537), Biotin carboxylation domain (InterPro:IPR011764), Biotin-binding site (InterPro:IPR001882), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Acetyl-coenzyme A carboxyltransferase, C-terminal (InterPro:IPR011763), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 2 (TAIR:AT1G36180.1). & (gnl|cdd|35589 : 2920.0) no description available & (gnl|cdd|87496 : 802.0) no description available & (q2qmg2|mcca_orysa : 212.0) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) - Oryza sativa (Rice) & (reliability: 7390.0) & (original description: Putative ACC1, Description = Acetyl-CoA carboxylase 1, PFAM = PF08326;PF01039;PF00364;PF02785;PF00289;PF02786)' T '11.1.1.1' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.homomeric Enzyme' 'niben101scf06375_650799-668997' '(at1g36160 : 3712.0) Encodes acetyl-CoA carboxylase. Mutant displays uncoordinated cell divisions which are enhanced by cytokinins. Mutant also has aberrant organization of the apical region in the embryo and abnormal root and shoot development. Essential for very long chain fatty acid elongation.; acetyl-CoA carboxylase 1 (ACC1); CONTAINS InterPro DOMAIN/s: Acetyl-coenzyme A carboxyltransferase, N-terminal (InterPro:IPR011762), Carboxyl transferase (InterPro:IPR000022), Biotin/lipoyl attachment (InterPro:IPR000089), Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold (InterPro:IPR011761), Biotin carboxylase, C-terminal (InterPro:IPR005482), Single hybrid motif (InterPro:IPR011053), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), Acetyl-CoA carboxylase, central region (InterPro:IPR013537), Biotin carboxylation domain (InterPro:IPR011764), Biotin-binding site (InterPro:IPR001882), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Acetyl-coenzyme A carboxyltransferase, C-terminal (InterPro:IPR011763), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 2 (TAIR:AT1G36180.1). & (gnl|cdd|35589 : 2915.0) no description available & (gnl|cdd|87496 : 796.0) no description available & (q2qmg2|mcca_orysa : 214.0) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) - Oryza sativa (Rice) & (reliability: 7424.0) & (original description: Putative ACC1, Description = Acetyl-CoA carboxylase 1, PFAM = PF02785;PF00364;PF00289;PF08326;PF01039;PF02786)' T '11.1.1.2' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex' '' '' '11.1.1.2.1' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.alpha Carboxyltransferase' 'niben101scf01968_217550-223823' '(at2g38040 : 582.0) encodes the carboxyltransferase alpha subunit of acetyl-CoA carboxylase, involved in de novo fatty acid biosynthesis; acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit (CAC3); FUNCTIONS IN: acetyl-CoA carboxylase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: acetyl-CoA carboxylase complex, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-CoA carboxylase, alpha subunit, conserved region (InterPro:IPR020582), Acetyl-CoA carboxylase, alpha subunit (InterPro:IPR001095), Acetyl-coenzyme A carboxyltransferase, C-terminal (InterPro:IPR011763); Has 39620 Blast hits to 29201 proteins in 2891 species: Archae - 603; Bacteria - 9663; Metazoa - 14634; Fungi - 2688; Plants - 1525; Viruses - 82; Other Eukaryotes - 10425 (source: NCBI BLink). & (gnl|cdd|81715 : 421.0) no description available & (reliability: 1164.0) & (original description: Putative accA, Description = Carboxyltransferase alpha subunit, PFAM = PF03255)' T '11.1.1.2.1' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.alpha Carboxyltransferase' 'niben101scf09123_70062-77009' '(at2g38040 : 799.0) encodes the carboxyltransferase alpha subunit of acetyl-CoA carboxylase, involved in de novo fatty acid biosynthesis; acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit (CAC3); FUNCTIONS IN: acetyl-CoA carboxylase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: acetyl-CoA carboxylase complex, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-CoA carboxylase, alpha subunit, conserved region (InterPro:IPR020582), Acetyl-CoA carboxylase, alpha subunit (InterPro:IPR001095), Acetyl-coenzyme A carboxyltransferase, C-terminal (InterPro:IPR011763); Has 39620 Blast hits to 29201 proteins in 2891 species: Archae - 603; Bacteria - 9663; Metazoa - 14634; Fungi - 2688; Plants - 1525; Viruses - 82; Other Eukaryotes - 10425 (source: NCBI BLink). & (gnl|cdd|81715 : 437.0) no description available & (reliability: 1598.0) & (original description: Putative accA, Description = Carboxyltransferase alpha subunit, PFAM = PF03255)' T '11.1.1.2.1' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.alpha Carboxyltransferase' 'niben101scf09584_108695-115105' '(at2g38040 : 587.0) encodes the carboxyltransferase alpha subunit of acetyl-CoA carboxylase, involved in de novo fatty acid biosynthesis; acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit (CAC3); FUNCTIONS IN: acetyl-CoA carboxylase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: acetyl-CoA carboxylase complex, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-CoA carboxylase, alpha subunit, conserved region (InterPro:IPR020582), Acetyl-CoA carboxylase, alpha subunit (InterPro:IPR001095), Acetyl-coenzyme A carboxyltransferase, C-terminal (InterPro:IPR011763); Has 39620 Blast hits to 29201 proteins in 2891 species: Archae - 603; Bacteria - 9663; Metazoa - 14634; Fungi - 2688; Plants - 1525; Viruses - 82; Other Eukaryotes - 10425 (source: NCBI BLink). & (gnl|cdd|81715 : 422.0) no description available & (reliability: 1174.0) & (original description: Putative accA, Description = Carboxyltransferase alpha subunit, PFAM = PF03255)' T '11.1.1.2.2' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.beta Carboxyltransferase' 'niben044scf00021620ctg011_3410-5852' '(p12219|accd_tobac : 246.0) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (EC 6.4.1.2) (ACCase beta chain) - Nicotiana tabacum (Common tobacco) & (atcg00500 : 94.0) Encodes the carboxytransferase beta subunit of the Acetyl-CoA carboxylase (ACCase) complex in plastids. This complex catalyzes the carboxylation of acetyl-CoA to produce malonyl-CoA, the first committed step in fatty acid synthesis.; acetyl-CoA carboxylase carboxyl transferase subunit beta (ACCD); FUNCTIONS IN: protein binding, acetyl-CoA carboxylase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast, acetate CoA-transferase complex, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-coenzyme A carboxyltransferase, N-terminal (InterPro:IPR011762), Carboxyl transferase (InterPro:IPR000022), Acetyl-CoA carboxylase carboxyl transferase, beta subunit (InterPro:IPR000438). & (reliability: 188.0) & (original description: Putative accD, Description = Acetyl-CoA carboxylase, PFAM = )' T '11.1.1.2.2' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.beta Carboxyltransferase' 'niben101scf11178_173428-176343' '(p12219|accd_tobac : 956.0) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (EC 6.4.1.2) (ACCase beta chain) - Nicotiana tabacum (Common tobacco) & (atcg00500 : 592.0) Encodes the carboxytransferase beta subunit of the Acetyl-CoA carboxylase (ACCase) complex in plastids. This complex catalyzes the carboxylation of acetyl-CoA to produce malonyl-CoA, the first committed step in fatty acid synthesis.; acetyl-CoA carboxylase carboxyl transferase subunit beta (ACCD); FUNCTIONS IN: protein binding, acetyl-CoA carboxylase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast, acetate CoA-transferase complex, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-coenzyme A carboxyltransferase, N-terminal (InterPro:IPR011762), Carboxyl transferase (InterPro:IPR000022), Acetyl-CoA carboxylase carboxyl transferase, beta subunit (InterPro:IPR000438). & (gnl|cdd|81680 : 376.0) no description available & (gnl|cdd|35760 : 325.0) no description available & (reliability: 1184.0) & (original description: Putative accD, Description = Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic, PFAM = PF01039)' T '11.1.1.2.3' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxyl Carrier Protein' 'nbv0.3scaffold9179_2848-10452' '(at5g16390 : 148.0) Encodes for the biotin carboxyl-carrier subunit of the multi-enzyme plastidial acetyl-coenzyme A carboxylase complex.; BIOTIN CARBOXYL-CARRIER PROTEIN 1 (BCCP-1); FUNCTIONS IN: acetyl-CoA carboxylase activity, biotin binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-CoA biotin carboxyl carrier (InterPro:IPR001249), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: biotin carboxyl carrier protein 2 (TAIR:AT5G15530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q42783|bccp_soybn : 143.0) Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) - Glycine max (Soybean) & (gnl|cdd|81929 : 143.0) no description available & (reliability: 296.0) & (original description: Putative BCCP2, Description = Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic, PFAM = PF00364)' T '11.1.1.2.3' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxyl Carrier Protein' 'nbv0.3scaffold14617_34154-39678' '(gnl|cdd|81929 : 144.0) no description available & (at5g16390 : 139.0) Encodes for the biotin carboxyl-carrier subunit of the multi-enzyme plastidial acetyl-coenzyme A carboxylase complex.; BIOTIN CARBOXYL-CARRIER PROTEIN 1 (BCCP-1); FUNCTIONS IN: acetyl-CoA carboxylase activity, biotin binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-CoA biotin carboxyl carrier (InterPro:IPR001249), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: biotin carboxyl carrier protein 2 (TAIR:AT5G15530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q42783|bccp_soybn : 131.0) Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) - Glycine max (Soybean) & (reliability: 278.0) & (original description: Putative BCCP1, Description = Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic, PFAM = PF00364)' T '11.1.1.2.3' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxyl Carrier Protein' 'nbv0.5scaffold265_207869-215304' '(at3g15690 : 223.0) Single hybrid motif superfamily protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Single hybrid motif superfamily protein (TAIR:AT1G52670.1); Has 3111 Blast hits to 3110 proteins in 1263 species: Archae - 10; Bacteria - 2402; Metazoa - 8; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 561 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative At3g15690, Description = Putative acetyl-CoA carboxylase biotin-containing subunit, PFAM = PF00364)' T '11.1.1.2.3' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxyl Carrier Protein' 'niben044scf00007414ctg003_6641-14393' '(at5g16390 : 146.0) Encodes for the biotin carboxyl-carrier subunit of the multi-enzyme plastidial acetyl-coenzyme A carboxylase complex.; BIOTIN CARBOXYL-CARRIER PROTEIN 1 (BCCP-1); FUNCTIONS IN: acetyl-CoA carboxylase activity, biotin binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-CoA biotin carboxyl carrier (InterPro:IPR001249), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: biotin carboxyl carrier protein 2 (TAIR:AT5G15530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81929 : 146.0) no description available & (q42783|bccp_soybn : 139.0) Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) - Glycine max (Soybean) & (reliability: 292.0) & (original description: Putative BCCP1, Description = Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic, PFAM = PF00364)' T '11.1.1.2.3' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxyl Carrier Protein' 'niben044scf00015644ctg028_8033-14409' '(at1g52670 : 187.0) Single hybrid motif superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Single hybrid motif superfamily protein (TAIR:AT3G15690.2); Has 3136 Blast hits to 3136 proteins in 1282 species: Archae - 2; Bacteria - 2438; Metazoa - 2; Fungi - 0; Plants - 126; Viruses - 0; Other Eukaryotes - 568 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative At3g15690, Description = Putative acetyl-CoA carboxylase biotin-containing subunit, PFAM = PF00364)' T '11.1.1.2.3' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxyl Carrier Protein' 'niben101scf00653_179567-187240' '(at5g16390 : 160.0) Encodes for the biotin carboxyl-carrier subunit of the multi-enzyme plastidial acetyl-coenzyme A carboxylase complex.; BIOTIN CARBOXYL-CARRIER PROTEIN 1 (BCCP-1); FUNCTIONS IN: acetyl-CoA carboxylase activity, biotin binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-CoA biotin carboxyl carrier (InterPro:IPR001249), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: biotin carboxyl carrier protein 2 (TAIR:AT5G15530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q42783|bccp_soybn : 156.0) Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) - Glycine max (Soybean) & (gnl|cdd|81929 : 140.0) no description available & (reliability: 320.0) & (original description: Putative BCCP1, Description = Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic, PFAM = PF00364)' T '11.1.1.2.3' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxyl Carrier Protein' 'niben101scf04375_780202-802345' '(gnl|cdd|81929 : 130.0) no description available & (at5g16390 : 129.0) Encodes for the biotin carboxyl-carrier subunit of the multi-enzyme plastidial acetyl-coenzyme A carboxylase complex.; BIOTIN CARBOXYL-CARRIER PROTEIN 1 (BCCP-1); FUNCTIONS IN: acetyl-CoA carboxylase activity, biotin binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-CoA biotin carboxyl carrier (InterPro:IPR001249), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: biotin carboxyl carrier protein 2 (TAIR:AT5G15530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q42783|bccp_soybn : 118.0) Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) - Glycine max (Soybean) & (reliability: 258.0) & (original description: Putative BCCP1, Description = Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic, PFAM = PF00364)' T '11.1.1.2.3' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxyl Carrier Protein' 'niben101scf07382_82111-99073' '(at1g52670 : 226.0) Single hybrid motif superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Single hybrid motif superfamily protein (TAIR:AT3G15690.2); Has 3136 Blast hits to 3136 proteins in 1282 species: Archae - 2; Bacteria - 2438; Metazoa - 2; Fungi - 0; Plants - 126; Viruses - 0; Other Eukaryotes - 568 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative At1g52670, Description = Single hybrid motif superfamily protein, PFAM = PF00364)' T '11.1.1.2.3' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxyl Carrier Protein' 'niben101scf10532_35723-41568' '(gnl|cdd|81929 : 142.0) no description available & (at5g16390 : 141.0) Encodes for the biotin carboxyl-carrier subunit of the multi-enzyme plastidial acetyl-coenzyme A carboxylase complex.; BIOTIN CARBOXYL-CARRIER PROTEIN 1 (BCCP-1); FUNCTIONS IN: acetyl-CoA carboxylase activity, biotin binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-CoA biotin carboxyl carrier (InterPro:IPR001249), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: biotin carboxyl carrier protein 2 (TAIR:AT5G15530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q42783|bccp_soybn : 130.0) Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) - Glycine max (Soybean) & (reliability: 282.0) & (original description: Putative accB, Description = Acetyl-CoA carboxylase, biotin carboxyl carrier protein, PFAM = PF00364)' T '11.1.1.2.3' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxyl Carrier Protein' 'niben101scf12165_24403-29056' '(gnl|cdd|81929 : 144.0) no description available & (at5g15530 : 139.0) biotin carboxyl carrier protein isoform 2 (BCCP2) mRNA,; biotin carboxyl carrier protein 2 (BCCP2); FUNCTIONS IN: biotin binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Biotin-binding site (InterPro:IPR001882), Single hybrid motif (InterPro:IPR011053), Acetyl-CoA biotin carboxyl carrier (InterPro:IPR001249), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: chloroplastic acetylcoenzyme A carboxylase 1 (TAIR:AT5G16390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q42783|bccp_soybn : 125.0) Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) - Glycine max (Soybean) & (reliability: 278.0) & (original description: Putative BCCP2, Description = Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic, PFAM = PF00364)' T '11.1.1.2.3' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxyl Carrier Protein' 'niben101scf12266_232689-242617' '(at1g52670 : 191.0) Single hybrid motif superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Single hybrid motif superfamily protein (TAIR:AT3G15690.2); Has 3136 Blast hits to 3136 proteins in 1282 species: Archae - 2; Bacteria - 2438; Metazoa - 2; Fungi - 0; Plants - 126; Viruses - 0; Other Eukaryotes - 568 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative F383_25561, Description = Pyruvate carboxylase subunit b, PFAM = PF00364)' T '11.1.1.2.4' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxylase' 'niben101scf04077_351942-375148' '(at5g35360 : 909.0) Encodes biotin carboxylase subunit (CAC2).; acetyl Co-enzyme a carboxylase biotin carboxylase subunit (CAC2); CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), Acetyl-CoA carboxylase, biotin carboxylase (InterPro:IPR004549), PreATP-grasp-like fold (InterPro:IPR016185), Biotin carboxylation domain (InterPro:IPR011764), ATP-grasp fold (InterPro:IPR011761), Biotin carboxylase, C-terminal (InterPro:IPR005482), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054); BEST Arabidopsis thaliana protein match is: methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) (TAIR:AT1G03090.2). & (gnl|cdd|82696 : 751.0) no description available & (gnl|cdd|35459 : 717.0) no description available & (q2qmg2|mcca_orysa : 426.0) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) - Oryza sativa (Rice) & (reliability: 1818.0) & (original description: Putative accC, Description = Acetyl-CoA carboxylase, biotin carboxylase, PFAM = PF00289;PF02785;PF02786)' T '11.1.1.2.4' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxylase' 'niben101scf06829_235026-251914' '(at5g35360 : 905.0) Encodes biotin carboxylase subunit (CAC2).; acetyl Co-enzyme a carboxylase biotin carboxylase subunit (CAC2); CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), Acetyl-CoA carboxylase, biotin carboxylase (InterPro:IPR004549), PreATP-grasp-like fold (InterPro:IPR016185), Biotin carboxylation domain (InterPro:IPR011764), ATP-grasp fold (InterPro:IPR011761), Biotin carboxylase, C-terminal (InterPro:IPR005482), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054); BEST Arabidopsis thaliana protein match is: methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) (TAIR:AT1G03090.2). & (gnl|cdd|82696 : 750.0) no description available & (gnl|cdd|35459 : 715.0) no description available & (q2qmg2|mcca_orysa : 428.0) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) - Oryza sativa (Rice) & (reliability: 1810.0) & (original description: Putative accC, Description = Acetyl-CoA carboxylase, biotin carboxylase, PFAM = PF00289;PF02786;PF02785)' T '11.1.2' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Transacylase' 'niben101scf02357_875685-882441' '(at2g30200 : 510.0) catalytics;transferases;[acyl-carrier-protein] S-malonyltransferases;binding; FUNCTIONS IN: binding, transferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Acyl transferase domain (InterPro:IPR001227), Acyl transferase (InterPro:IPR014043), Malonyl-CoA ACP transacylase, ACP-binding (InterPro:IPR016036); Has 15695 Blast hits to 14359 proteins in 2779 species: Archae - 4; Bacteria - 11793; Metazoa - 195; Fungi - 1104; Plants - 63; Viruses - 0; Other Eukaryotes - 2536 (source: NCBI BLink). & (gnl|cdd|38137 : 369.0) no description available & (gnl|cdd|30679 : 287.0) no description available & (reliability: 1020.0) & (original description: Putative fabD, Description = Malonyl CoA-acyl carrier protein transacylase, PFAM = PF00698)' T '11.1.2' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Transacylase' 'niben101scf05467_200643-207154' '(at2g30200 : 511.0) catalytics;transferases;[acyl-carrier-protein] S-malonyltransferases;binding; FUNCTIONS IN: binding, transferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Acyl transferase domain (InterPro:IPR001227), Acyl transferase (InterPro:IPR014043), Malonyl-CoA ACP transacylase, ACP-binding (InterPro:IPR016036); Has 15695 Blast hits to 14359 proteins in 2779 species: Archae - 4; Bacteria - 11793; Metazoa - 195; Fungi - 1104; Plants - 63; Viruses - 0; Other Eukaryotes - 2536 (source: NCBI BLink). & (gnl|cdd|38137 : 374.0) no description available & (gnl|cdd|30679 : 288.0) no description available & (reliability: 1022.0) & (original description: Putative fabD, Description = Malonyl-CoA:ACP transacylase, PFAM = PF00698)' T '11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'nbv0.3scaffold25470_24033-28550' '(at2g04540 : 392.0) Beta-ketoacyl synthase; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, fatty acid synthase activity, catalytic activity; INVOLVED IN: biosynthetic process, fatty acid biosynthetic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Thiolase-like (InterPro:IPR016039), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Thiolase-like, subgroup (InterPro:IPR016038), Beta-ketoacyl synthase, active site (InterPro:IPR018201); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-acyl carrier protein synthase I (TAIR:AT5G46290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36608 : 304.0) no description available & (gnl|cdd|82192 : 297.0) no description available & (p23902|kasc1_horvu : 130.0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) - Hordeum vulgare (Barley) & (reliability: 784.0) & (original description: Putative fabF, Description = 3-oxoacyl-[acyl-carrier-protein] synthase 2, PFAM = PF00109)' T '11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'niben044scf00000760ctg001_81-15152' '(q07510|fabh_spiol : 548.0) 3-oxoacyl-[acyl-carrier-protein] synthase III, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase III) (KAS III) - Spinacia oleracea (Spinach) & (at1g62640 : 546.0) 3-ketoacyl-acyl carrier protein synthase III (KAS III); 3-ketoacyl-acyl carrier protein synthase III (KAS III); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, 3-oxoacyl-[acyl-carrier-protein] synthase activity, catalytic activity; INVOLVED IN: lipid biosynthetic process, metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III (InterPro:IPR013751), Beta-ketoacyl-acyl carrier protein synthase III (FabH) (InterPro:IPR004655); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|82946 : 427.0) no description available & (reliability: 1092.0) & (original description: Putative KAS3A, Description = 3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic, PFAM = PF08541;PF08545)' T '11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'niben044scf00033926ctg003_2777-9287' '(at1g74960 : 674.0) Encodes a plastidic beta-ketoacyl-ACP synthase II, involved in fatty acid elongation from 16:0-ACP to 18:0-ACP. Homozygous knock-out mutants are embryo lethal, indicating early embryo development is sensitive to elevated 16:0.; fatty acid biosynthesis 1 (FAB1); CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Thiolase-like (InterPro:IPR016039), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Thiolase-like, subgroup (InterPro:IPR016038), Beta-ketoacyl synthase, active site (InterPro:IPR018201); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-acyl carrier protein synthase I (TAIR:AT5G46290.1). & (gnl|cdd|36608 : 597.0) no description available & (gnl|cdd|29421 : 517.0) no description available & (p23902|kasc1_horvu : 408.0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) - Hordeum vulgare (Barley) & (reliability: 1348.0) & (original description: Putative KAS2, Description = 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic, PFAM = PF00109;PF02801)' T '11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'niben044scf00037550ctg002_1-21681' '(at5g46290 : 758.0) 3-ketoacyl-acyl carrier protein synthase I (KAS I) mRNA,; 3-ketoacyl-acyl carrier protein synthase I (KAS I); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, fatty acid synthase activity, catalytic activity; INVOLVED IN: biosynthetic process, metabolic process, fatty acid biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Beta-ketoacyl synthase, active site (InterPro:IPR018201), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Polyketide synthase, beta-ketoacyl synthase region (InterPro:IPR020841); BEST Arabidopsis thaliana protein match is: fatty acid biosynthesis 1 (TAIR:AT1G74960.3). & (p23902|kasc1_horvu : 701.0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) - Hordeum vulgare (Barley) & (gnl|cdd|36608 : 589.0) no description available & (gnl|cdd|81931 : 519.0) no description available & (reliability: 1516.0) & (original description: Putative KAS1, Description = 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic, PFAM = PF02801;PF00109)' T '11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'niben101scf00811_1031804-1042175' '(at2g04540 : 648.0) Beta-ketoacyl synthase; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, fatty acid synthase activity, catalytic activity; INVOLVED IN: biosynthetic process, fatty acid biosynthetic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Thiolase-like (InterPro:IPR016039), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Thiolase-like, subgroup (InterPro:IPR016038), Beta-ketoacyl synthase, active site (InterPro:IPR018201); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-acyl carrier protein synthase I (TAIR:AT5G46290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36608 : 554.0) no description available & (gnl|cdd|82192 : 541.0) no description available & (p23902|kasc1_horvu : 253.0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) - Hordeum vulgare (Barley) & (reliability: 1296.0) & (original description: Putative KAS, Description = 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial, PFAM = PF00109;PF02801)' T '11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'niben101scf02437_647368-655084' '(at1g74960 : 684.0) Encodes a plastidic beta-ketoacyl-ACP synthase II, involved in fatty acid elongation from 16:0-ACP to 18:0-ACP. Homozygous knock-out mutants are embryo lethal, indicating early embryo development is sensitive to elevated 16:0.; fatty acid biosynthesis 1 (FAB1); CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Thiolase-like (InterPro:IPR016039), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Thiolase-like, subgroup (InterPro:IPR016038), Beta-ketoacyl synthase, active site (InterPro:IPR018201); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-acyl carrier protein synthase I (TAIR:AT5G46290.1). & (gnl|cdd|36608 : 594.0) no description available & (gnl|cdd|29421 : 516.0) no description available & (p23902|kasc1_horvu : 426.0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) - Hordeum vulgare (Barley) & (reliability: 1368.0) & (original description: Putative KAS2, Description = 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic, PFAM = PF00109;PF02801)' T '11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'niben101scf02972_360270-367333' '(at5g46290 : 642.0) 3-ketoacyl-acyl carrier protein synthase I (KAS I) mRNA,; 3-ketoacyl-acyl carrier protein synthase I (KAS I); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, fatty acid synthase activity, catalytic activity; INVOLVED IN: biosynthetic process, metabolic process, fatty acid biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Beta-ketoacyl synthase, active site (InterPro:IPR018201), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Polyketide synthase, beta-ketoacyl synthase region (InterPro:IPR020841); BEST Arabidopsis thaliana protein match is: fatty acid biosynthesis 1 (TAIR:AT1G74960.3). & (p23902|kasc1_horvu : 627.0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) - Hordeum vulgare (Barley) & (gnl|cdd|36608 : 550.0) no description available & (gnl|cdd|29421 : 513.0) no description available & (reliability: 1284.0) & (original description: Putative KAS1, Description = 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic, PFAM = PF00109;PF02801)' T '11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'niben101scf03330_19816-30151' '(at1g74960 : 700.0) Encodes a plastidic beta-ketoacyl-ACP synthase II, involved in fatty acid elongation from 16:0-ACP to 18:0-ACP. Homozygous knock-out mutants are embryo lethal, indicating early embryo development is sensitive to elevated 16:0.; fatty acid biosynthesis 1 (FAB1); CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Thiolase-like (InterPro:IPR016039), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Thiolase-like, subgroup (InterPro:IPR016038), Beta-ketoacyl synthase, active site (InterPro:IPR018201); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-acyl carrier protein synthase I (TAIR:AT5G46290.1). & (gnl|cdd|36608 : 593.0) no description available & (gnl|cdd|29421 : 515.0) no description available & (p23902|kasc1_horvu : 412.0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) - Hordeum vulgare (Barley) & (reliability: 1400.0) & (original description: Putative fabF, Description = 3-oxoacyl-[acyl-carrier-protein] synthase 2, PFAM = PF02801;PF00109)' T '11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'niben101scf07728_305916-312267' '(at5g46290 : 792.0) 3-ketoacyl-acyl carrier protein synthase I (KAS I) mRNA,; 3-ketoacyl-acyl carrier protein synthase I (KAS I); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, fatty acid synthase activity, catalytic activity; INVOLVED IN: biosynthetic process, metabolic process, fatty acid biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Beta-ketoacyl synthase, active site (InterPro:IPR018201), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Polyketide synthase, beta-ketoacyl synthase region (InterPro:IPR020841); BEST Arabidopsis thaliana protein match is: fatty acid biosynthesis 1 (TAIR:AT1G74960.3). & (p23902|kasc1_horvu : 706.0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) - Hordeum vulgare (Barley) & (gnl|cdd|36608 : 589.0) no description available & (gnl|cdd|81931 : 521.0) no description available & (reliability: 1584.0) & (original description: Putative KAS1, Description = 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic, PFAM = PF00109;PF02801)' T '11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'niben101scf07826_339411-355558' '(at5g46290 : 771.0) 3-ketoacyl-acyl carrier protein synthase I (KAS I) mRNA,; 3-ketoacyl-acyl carrier protein synthase I (KAS I); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, fatty acid synthase activity, catalytic activity; INVOLVED IN: biosynthetic process, metabolic process, fatty acid biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Beta-ketoacyl synthase, active site (InterPro:IPR018201), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Polyketide synthase, beta-ketoacyl synthase region (InterPro:IPR020841); BEST Arabidopsis thaliana protein match is: fatty acid biosynthesis 1 (TAIR:AT1G74960.3). & (p23902|kasc1_horvu : 717.0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) - Hordeum vulgare (Barley) & (gnl|cdd|36608 : 590.0) no description available & (gnl|cdd|81931 : 528.0) no description available & (reliability: 1542.0) & (original description: Putative KAS12, Description = 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic, PFAM = PF00109;PF02801)' T '11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'niben101scf08936_787262-801738' '(at1g62640 : 579.0) 3-ketoacyl-acyl carrier protein synthase III (KAS III); 3-ketoacyl-acyl carrier protein synthase III (KAS III); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, 3-oxoacyl-[acyl-carrier-protein] synthase activity, catalytic activity; INVOLVED IN: lipid biosynthetic process, metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III (InterPro:IPR013751), Beta-ketoacyl-acyl carrier protein synthase III (FabH) (InterPro:IPR004655); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q07510|fabh_spiol : 572.0) 3-oxoacyl-[acyl-carrier-protein] synthase III, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase III) (KAS III) - Spinacia oleracea (Spinach) & (gnl|cdd|82946 : 424.0) no description available & (reliability: 1158.0) & (original description: Putative KAS3A, Description = 3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic, PFAM = PF08541;PF08545)' T '11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'niben101scf10810_97006-107202' '(at1g74960 : 702.0) Encodes a plastidic beta-ketoacyl-ACP synthase II, involved in fatty acid elongation from 16:0-ACP to 18:0-ACP. Homozygous knock-out mutants are embryo lethal, indicating early embryo development is sensitive to elevated 16:0.; fatty acid biosynthesis 1 (FAB1); CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Thiolase-like (InterPro:IPR016039), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Thiolase-like, subgroup (InterPro:IPR016038), Beta-ketoacyl synthase, active site (InterPro:IPR018201); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-acyl carrier protein synthase I (TAIR:AT5G46290.1). & (gnl|cdd|36608 : 594.0) no description available & (gnl|cdd|29421 : 512.0) no description available & (p23902|kasc1_horvu : 418.0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) - Hordeum vulgare (Barley) & (reliability: 1404.0) & (original description: Putative KAS1, Description = 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic, PFAM = PF02801;PF00109)' T '11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'niben101scf12889_24331-53638' '(at1g62640 : 513.0) 3-ketoacyl-acyl carrier protein synthase III (KAS III); 3-ketoacyl-acyl carrier protein synthase III (KAS III); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, 3-oxoacyl-[acyl-carrier-protein] synthase activity, catalytic activity; INVOLVED IN: lipid biosynthetic process, metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III (InterPro:IPR013751), Beta-ketoacyl-acyl carrier protein synthase III (FabH) (InterPro:IPR004655); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q07510|fabh_spiol : 489.0) 3-oxoacyl-[acyl-carrier-protein] synthase III, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase III) (KAS III) - Spinacia oleracea (Spinach) & (gnl|cdd|82946 : 400.0) no description available & (reliability: 1026.0) & (original description: Putative KAS, Description = Beta-keto-ACP synthase, PFAM = PF08545;PF08541)' T '11.1.4' 'lipid metabolism.FA synthesis and FA elongation.ACP oxoacyl reductase' 'nbv0.3scaffold28291_10993-21919' '(q93x67|fabg2_brana : 308.0) 3-oxoacyl-[acyl-carrier-protein] reductase 2, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 2) - Brassica napus (Rape) & (at1g24360 : 293.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: 3-oxoacyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: oxidation reduction, metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxoacyl-(acyl-carrier-protein) reductase (InterPro:IPR011284), Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29370.1); Has 133396 Blast hits to 132816 proteins in 3924 species: Archae - 1008; Bacteria - 83642; Metazoa - 7884; Fungi - 7548; Plants - 3127; Viruses - 5; Other Eukaryotes - 30182 (source: NCBI BLink). & (gnl|cdd|81632 : 277.0) no description available & (gnl|cdd|36414 : 248.0) no description available & (reliability: 586.0) & (original description: Putative bkr4, Description = 3-oxoacyl-[acyl-carrier-protein] reductase 4, PFAM = PF00106)' T '11.1.4' 'lipid metabolism.FA synthesis and FA elongation.ACP oxoacyl reductase' 'nbv0.5scaffold45_1205146-1210755' '(q93x62|fabg1_brana : 155.0) 3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 1) (Beta-keto acyl-carrier protein reductase 1) - Brassica napus (Rape) & (at1g24360 : 149.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: 3-oxoacyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: oxidation reduction, metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxoacyl-(acyl-carrier-protein) reductase (InterPro:IPR011284), Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29370.1); Has 133396 Blast hits to 132816 proteins in 3924 species: Archae - 1008; Bacteria - 83642; Metazoa - 7884; Fungi - 7548; Plants - 3127; Viruses - 5; Other Eukaryotes - 30182 (source: NCBI BLink). & (gnl|cdd|76850 : 97.4) no description available & (gnl|cdd|36414 : 93.9) no description available & (reliability: 298.0) & (original description: Putative bkr2, Description = 3-oxoacyl-(Acyl-carrier-protein) reductase, PFAM = PF00106)' T '11.1.4' 'lipid metabolism.FA synthesis and FA elongation.ACP oxoacyl reductase' 'nbv0.5scaffold45_1205194-1236842' '(q93x62|fabg1_brana : 307.0) 3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 1) (Beta-keto acyl-carrier protein reductase 1) - Brassica napus (Rape) & (at1g24360 : 294.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: 3-oxoacyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: oxidation reduction, metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxoacyl-(acyl-carrier-protein) reductase (InterPro:IPR011284), Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29370.1); Has 133396 Blast hits to 132816 proteins in 3924 species: Archae - 1008; Bacteria - 83642; Metazoa - 7884; Fungi - 7548; Plants - 3127; Viruses - 5; Other Eukaryotes - 30182 (source: NCBI BLink). & (gnl|cdd|81632 : 268.0) no description available & (gnl|cdd|36414 : 237.0) no description available & (reliability: 588.0) & (original description: Putative gbkr1, Description = 3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplastic, PFAM = PF13561;PF13561)' T '11.1.4' 'lipid metabolism.FA synthesis and FA elongation.ACP oxoacyl reductase' 'niben044scf00007070ctg006_19659-32090' '(q93x62|fabg1_brana : 371.0) 3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 1) (Beta-keto acyl-carrier protein reductase 1) - Brassica napus (Rape) & (at1g24360 : 356.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: 3-oxoacyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: oxidation reduction, metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxoacyl-(acyl-carrier-protein) reductase (InterPro:IPR011284), Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29370.1); Has 133396 Blast hits to 132816 proteins in 3924 species: Archae - 1008; Bacteria - 83642; Metazoa - 7884; Fungi - 7548; Plants - 3127; Viruses - 5; Other Eukaryotes - 30182 (source: NCBI BLink). & (gnl|cdd|81632 : 320.0) no description available & (gnl|cdd|36414 : 293.0) no description available & (reliability: 712.0) & (original description: Putative CLKR27, Description = 3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic, PFAM = PF13561)' T '11.1.4' 'lipid metabolism.FA synthesis and FA elongation.ACP oxoacyl reductase' 'niben101scf05634_327123-331932' '(q93x62|fabg1_brana : 155.0) 3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 1) (Beta-keto acyl-carrier protein reductase 1) - Brassica napus (Rape) & (at1g24360 : 149.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: 3-oxoacyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: oxidation reduction, metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxoacyl-(acyl-carrier-protein) reductase (InterPro:IPR011284), Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29370.1); Has 133396 Blast hits to 132816 proteins in 3924 species: Archae - 1008; Bacteria - 83642; Metazoa - 7884; Fungi - 7548; Plants - 3127; Viruses - 5; Other Eukaryotes - 30182 (source: NCBI BLink). & (gnl|cdd|76850 : 97.4) no description available & (gnl|cdd|36414 : 92.4) no description available & (reliability: 298.0) & (original description: Putative bkr2, Description = 3-oxoacyl-(Acyl-carrier-protein) reductase, PFAM = PF00106)' T '11.1.4' 'lipid metabolism.FA synthesis and FA elongation.ACP oxoacyl reductase' 'niben101scf18951_113316-120969' '(q93x62|fabg1_brana : 365.0) 3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 1) (Beta-keto acyl-carrier protein reductase 1) - Brassica napus (Rape) & (at1g24360 : 340.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: 3-oxoacyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: oxidation reduction, metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxoacyl-(acyl-carrier-protein) reductase (InterPro:IPR011284), Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29370.1); Has 133396 Blast hits to 132816 proteins in 3924 species: Archae - 1008; Bacteria - 83642; Metazoa - 7884; Fungi - 7548; Plants - 3127; Viruses - 5; Other Eukaryotes - 30182 (source: NCBI BLink). & (gnl|cdd|81632 : 308.0) no description available & (gnl|cdd|36414 : 292.0) no description available & (reliability: 680.0) & (original description: Putative gbkr1, Description = 3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplastic, PFAM = PF13561)' T '11.1.5' 'lipid metabolism.FA synthesis and FA elongation.beta hydroxyacyl ACP dehydratase' 'niben101scf00279_701309-710701' '(at5g10160 : 309.0) Thioesterase superfamily protein; FUNCTIONS IN: hydro-lyase activity, 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: cell wall, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ (InterPro:IPR013114), Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (InterPro:IPR010084); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT2G22230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80441 : 202.0) no description available & (reliability: 618.0) & (original description: Putative fabZ, Description = 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ, PFAM = PF07977)' T '11.1.5' 'lipid metabolism.FA synthesis and FA elongation.beta hydroxyacyl ACP dehydratase' 'niben101scf02335_456138-463556' '(at5g10160 : 309.0) Thioesterase superfamily protein; FUNCTIONS IN: hydro-lyase activity, 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: cell wall, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ (InterPro:IPR013114), Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (InterPro:IPR010084); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT2G22230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80441 : 203.0) no description available & (reliability: 618.0) & (original description: Putative fabZ, Description = 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ, PFAM = PF07977)' T '11.1.5' 'lipid metabolism.FA synthesis and FA elongation.beta hydroxyacyl ACP dehydratase' 'niben101scf02513_751562-757522' '(at5g10160 : 300.0) Thioesterase superfamily protein; FUNCTIONS IN: hydro-lyase activity, 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: cell wall, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ (InterPro:IPR013114), Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (InterPro:IPR010084); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT2G22230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80441 : 203.0) no description available & (reliability: 600.0) & (original description: Putative fabZ, Description = 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ, PFAM = PF07977)' T '11.1.5' 'lipid metabolism.FA synthesis and FA elongation.beta hydroxyacyl ACP dehydratase' 'niben101scf08566_865920-872127' '(at2g22230 : 167.0) Thioesterase superfamily protein; FUNCTIONS IN: crotonoyl-[acyl-carrier-protein] hydratase activity, 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity; INVOLVED IN: defense response to fungus, incompatible interaction, fatty acid biosynthetic process; LOCATED IN: cell wall, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ (InterPro:IPR013114), Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (InterPro:IPR010084); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT5G10160.1); Has 7405 Blast hits to 7398 proteins in 2208 species: Archae - 0; Bacteria - 5424; Metazoa - 2; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 1894 (source: NCBI BLink). & (gnl|cdd|80441 : 137.0) no description available & (reliability: 334.0) & (original description: Putative fabZ, Description = (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase, PFAM = PF07977)' T '11.1.6' 'lipid metabolism.FA synthesis and FA elongation.enoyl ACP reductase' 'niben044scf00004941ctg020_716-6136' '(p80030|fabi_brana : 467.0) Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplast precursor (EC 1.3.1.9) (NADH-dependent enoyl-ACP reductase) - Brassica napus (Rape) & (at2g05990 : 462.0) Encodes enoyl-ACP reductase a component of the fatty acid synthase complex. A reduced function mutation in this gene, mod1, was found in a screen for premature cell death mutants. Mutant plants have reduced lipid level and pleiotropic morphological defects, including chlorotic and abnormally shaped leaves.; MOSAIC DEATH 1 (MOD1); FUNCTIONS IN: enoyl-[acyl-carrier-protein] reductase (NADH) activity, oxidoreductase activity, enoyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: fatty acid synthase complex, thylakoid, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198), Enoyl-[acyl-carrier-protein] reductase (NADH) (InterPro:IPR014358); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29260.1); Has 34697 Blast hits to 34681 proteins in 2732 species: Archae - 268; Bacteria - 25258; Metazoa - 667; Fungi - 643; Plants - 667; Viruses - 0; Other Eukaryotes - 7194 (source: NCBI BLink). & (gnl|cdd|75497 : 432.0) no description available & (gnl|cdd|35944 : 87.8) no description available & (reliability: 924.0) & (original description: Putative pte, Description = Enoyl-ACP reductase, PFAM = PF13561)' T '11.1.6' 'lipid metabolism.FA synthesis and FA elongation.enoyl ACP reductase' 'niben101scf00340_347538-352599' '(at2g05990 : 513.0) Encodes enoyl-ACP reductase a component of the fatty acid synthase complex. A reduced function mutation in this gene, mod1, was found in a screen for premature cell death mutants. Mutant plants have reduced lipid level and pleiotropic morphological defects, including chlorotic and abnormally shaped leaves.; MOSAIC DEATH 1 (MOD1); FUNCTIONS IN: enoyl-[acyl-carrier-protein] reductase (NADH) activity, oxidoreductase activity, enoyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: fatty acid synthase complex, thylakoid, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198), Enoyl-[acyl-carrier-protein] reductase (NADH) (InterPro:IPR014358); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29260.1); Has 34697 Blast hits to 34681 proteins in 2732 species: Archae - 268; Bacteria - 25258; Metazoa - 667; Fungi - 643; Plants - 667; Viruses - 0; Other Eukaryotes - 7194 (source: NCBI BLink). & (p80030|fabi_brana : 504.0) Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplast precursor (EC 1.3.1.9) (NADH-dependent enoyl-ACP reductase) - Brassica napus (Rape) & (gnl|cdd|75497 : 430.0) no description available & (gnl|cdd|35944 : 90.9) no description available & (reliability: 1026.0) & (original description: Putative pte, Description = Enoyl-ACP reductase, PFAM = PF13561)' T '11.1.6' 'lipid metabolism.FA synthesis and FA elongation.enoyl ACP reductase' 'niben101scf02344_140031-144539' '(at2g05990 : 502.0) Encodes enoyl-ACP reductase a component of the fatty acid synthase complex. A reduced function mutation in this gene, mod1, was found in a screen for premature cell death mutants. Mutant plants have reduced lipid level and pleiotropic morphological defects, including chlorotic and abnormally shaped leaves.; MOSAIC DEATH 1 (MOD1); FUNCTIONS IN: enoyl-[acyl-carrier-protein] reductase (NADH) activity, oxidoreductase activity, enoyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: fatty acid synthase complex, thylakoid, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198), Enoyl-[acyl-carrier-protein] reductase (NADH) (InterPro:IPR014358); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29260.1); Has 34697 Blast hits to 34681 proteins in 2732 species: Archae - 268; Bacteria - 25258; Metazoa - 667; Fungi - 643; Plants - 667; Viruses - 0; Other Eukaryotes - 7194 (source: NCBI BLink). & (p80030|fabi_brana : 489.0) Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplast precursor (EC 1.3.1.9) (NADH-dependent enoyl-ACP reductase) - Brassica napus (Rape) & (gnl|cdd|75497 : 431.0) no description available & (gnl|cdd|35944 : 97.4) no description available & (reliability: 1004.0) & (original description: Putative fabI, Description = Enoyl-ACP reductase, PFAM = PF13561)' T '11.1.6' 'lipid metabolism.FA synthesis and FA elongation.enoyl ACP reductase' 'niben101scf06661_429690-435643' '(p80030|fabi_brana : 469.0) Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplast precursor (EC 1.3.1.9) (NADH-dependent enoyl-ACP reductase) - Brassica napus (Rape) & (at2g05990 : 467.0) Encodes enoyl-ACP reductase a component of the fatty acid synthase complex. A reduced function mutation in this gene, mod1, was found in a screen for premature cell death mutants. Mutant plants have reduced lipid level and pleiotropic morphological defects, including chlorotic and abnormally shaped leaves.; MOSAIC DEATH 1 (MOD1); FUNCTIONS IN: enoyl-[acyl-carrier-protein] reductase (NADH) activity, oxidoreductase activity, enoyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: fatty acid synthase complex, thylakoid, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198), Enoyl-[acyl-carrier-protein] reductase (NADH) (InterPro:IPR014358); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29260.1); Has 34697 Blast hits to 34681 proteins in 2732 species: Archae - 268; Bacteria - 25258; Metazoa - 667; Fungi - 643; Plants - 667; Viruses - 0; Other Eukaryotes - 7194 (source: NCBI BLink). & (gnl|cdd|75497 : 436.0) no description available & (gnl|cdd|35944 : 90.5) no description available & (reliability: 934.0) & (original description: Putative pte, Description = Enoyl-ACP reductase, PFAM = PF13561)' T '11.1.6' 'lipid metabolism.FA synthesis and FA elongation.enoyl ACP reductase' 'niben101scf09417_60746-65495' '(at2g05990 : 498.0) Encodes enoyl-ACP reductase a component of the fatty acid synthase complex. A reduced function mutation in this gene, mod1, was found in a screen for premature cell death mutants. Mutant plants have reduced lipid level and pleiotropic morphological defects, including chlorotic and abnormally shaped leaves.; MOSAIC DEATH 1 (MOD1); FUNCTIONS IN: enoyl-[acyl-carrier-protein] reductase (NADH) activity, oxidoreductase activity, enoyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: fatty acid synthase complex, thylakoid, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198), Enoyl-[acyl-carrier-protein] reductase (NADH) (InterPro:IPR014358); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29260.1); Has 34697 Blast hits to 34681 proteins in 2732 species: Archae - 268; Bacteria - 25258; Metazoa - 667; Fungi - 643; Plants - 667; Viruses - 0; Other Eukaryotes - 7194 (source: NCBI BLink). & (p80030|fabi_brana : 483.0) Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplast precursor (EC 1.3.1.9) (NADH-dependent enoyl-ACP reductase) - Brassica napus (Rape) & (gnl|cdd|75497 : 430.0) no description available & (gnl|cdd|35944 : 93.2) no description available & (reliability: 996.0) & (original description: Putative MOD1, Description = Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic, PFAM = PF13561)' T '11.1.7' 'lipid metabolism.FA synthesis and FA elongation.ACP thioesterase' 'nbv0.3scaffold14554_17707-23460' '(q9sqi3|fatb_goshi : 545.0) Myristoyl-acyl carrier protein thioesterase, chloroplast precursor (EC 3.1.2.-) (16:0-acyl-carrier protein thioesterase) (16:0-ACP thioesterase) (Acyl-[acyl-carrier-protein] hydrolase) (PATE) - Gossypium hirsutum (Upland cotton) & (at1g08510 : 542.0) Encodes an acyl-acyl carrier protein thioesterase. Hydrolyzes primarily saturated acyl-ACPs with chain lengths that vary between 8 and 18 carbons. Involved in saturated fatty acid synthesis. Nuclear-encoded, plastid-targeted globular protein that is functional as dimer.; fatty acyl-ACP thioesterases B (FATB); CONTAINS InterPro DOMAIN/s: Acyl-ACP-thioesterase, N-terminal domain (InterPro:IPR021113), Acyl-ACP thioesterase (InterPro:IPR002864); BEST Arabidopsis thaliana protein match is: fatA acyl-ACP thioesterase (TAIR:AT3G25110.1); Has 1275 Blast hits to 1274 proteins in 533 species: Archae - 0; Bacteria - 944; Metazoa - 0; Fungi - 0; Plants - 322; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|85587 : 345.0) no description available & (reliability: 1084.0) & (original description: Putative fatB, Description = Fatty acyl-ACP thioesterase B, PFAM = PF01643;PF12590)' T '11.1.7' 'lipid metabolism.FA synthesis and FA elongation.ACP thioesterase' 'niben101scf04024_129073-134012' '(at1g08510 : 286.0) Encodes an acyl-acyl carrier protein thioesterase. Hydrolyzes primarily saturated acyl-ACPs with chain lengths that vary between 8 and 18 carbons. Involved in saturated fatty acid synthesis. Nuclear-encoded, plastid-targeted globular protein that is functional as dimer.; fatty acyl-ACP thioesterases B (FATB); CONTAINS InterPro DOMAIN/s: Acyl-ACP-thioesterase, N-terminal domain (InterPro:IPR021113), Acyl-ACP thioesterase (InterPro:IPR002864); BEST Arabidopsis thaliana protein match is: fatA acyl-ACP thioesterase (TAIR:AT3G25110.1); Has 1275 Blast hits to 1274 proteins in 533 species: Archae - 0; Bacteria - 944; Metazoa - 0; Fungi - 0; Plants - 322; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (q9sqi3|fatb_goshi : 284.0) Myristoyl-acyl carrier protein thioesterase, chloroplast precursor (EC 3.1.2.-) (16:0-acyl-carrier protein thioesterase) (16:0-ACP thioesterase) (Acyl-[acyl-carrier-protein] hydrolase) (PATE) - Gossypium hirsutum (Upland cotton) & (gnl|cdd|85587 : 262.0) no description available & (reliability: 572.0) & (original description: Putative fatA, Description = Acyl-ACP thioesterase, PFAM = PF01643)' T '11.1.7' 'lipid metabolism.FA synthesis and FA elongation.ACP thioesterase' 'niben101scf04915_36957-45720' '(at3g25110 : 479.0) Encodes a FatA acyl-ACP thioesterase; fatA acyl-ACP thioesterase (FaTA); CONTAINS InterPro DOMAIN/s: Acyl-ACP thioesterase (InterPro:IPR002864); BEST Arabidopsis thaliana protein match is: Acyl-ACP thioesterase (TAIR:AT4G13050.1); Has 1414 Blast hits to 1414 proteins in 571 species: Archae - 0; Bacteria - 1089; Metazoa - 0; Fungi - 0; Plants - 317; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|85587 : 329.0) no description available & (q9sqi3|fatb_goshi : 233.0) Myristoyl-acyl carrier protein thioesterase, chloroplast precursor (EC 3.1.2.-) (16:0-acyl-carrier protein thioesterase) (16:0-ACP thioesterase) (Acyl-[acyl-carrier-protein] hydrolase) (PATE) - Gossypium hirsutum (Upland cotton) & (reliability: 958.0) & (original description: Putative FATA, Description = Oleoyl-acyl carrier protein thioesterase, chloroplastic, PFAM = PF01643)' T '11.1.7' 'lipid metabolism.FA synthesis and FA elongation.ACP thioesterase' 'niben101scf08341_399165-404477' '(at1g08510 : 546.0) Encodes an acyl-acyl carrier protein thioesterase. Hydrolyzes primarily saturated acyl-ACPs with chain lengths that vary between 8 and 18 carbons. Involved in saturated fatty acid synthesis. Nuclear-encoded, plastid-targeted globular protein that is functional as dimer.; fatty acyl-ACP thioesterases B (FATB); CONTAINS InterPro DOMAIN/s: Acyl-ACP-thioesterase, N-terminal domain (InterPro:IPR021113), Acyl-ACP thioesterase (InterPro:IPR002864); BEST Arabidopsis thaliana protein match is: fatA acyl-ACP thioesterase (TAIR:AT3G25110.1); Has 1275 Blast hits to 1274 proteins in 533 species: Archae - 0; Bacteria - 944; Metazoa - 0; Fungi - 0; Plants - 322; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (q9sqi3|fatb_goshi : 544.0) Myristoyl-acyl carrier protein thioesterase, chloroplast precursor (EC 3.1.2.-) (16:0-acyl-carrier protein thioesterase) (16:0-ACP thioesterase) (Acyl-[acyl-carrier-protein] hydrolase) (PATE) - Gossypium hirsutum (Upland cotton) & (gnl|cdd|85587 : 342.0) no description available & (reliability: 1092.0) & (original description: Putative fatB, Description = Fatty acyl-ACP thioesterase B, PFAM = PF12590;PF01643)' T '11.1.7' 'lipid metabolism.FA synthesis and FA elongation.ACP thioesterase' 'niben101scf08799_34506-41344' '(at3g25110 : 473.0) Encodes a FatA acyl-ACP thioesterase; fatA acyl-ACP thioesterase (FaTA); CONTAINS InterPro DOMAIN/s: Acyl-ACP thioesterase (InterPro:IPR002864); BEST Arabidopsis thaliana protein match is: Acyl-ACP thioesterase (TAIR:AT4G13050.1); Has 1414 Blast hits to 1414 proteins in 571 species: Archae - 0; Bacteria - 1089; Metazoa - 0; Fungi - 0; Plants - 317; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|85587 : 323.0) no description available & (q9sqi3|fatb_goshi : 241.0) Myristoyl-acyl carrier protein thioesterase, chloroplast precursor (EC 3.1.2.-) (16:0-acyl-carrier protein thioesterase) (16:0-ACP thioesterase) (Acyl-[acyl-carrier-protein] hydrolase) (PATE) - Gossypium hirsutum (Upland cotton) & (reliability: 946.0) & (original description: Putative FATA2, Description = Oleoyl-acyl carrier protein thioesterase 2, chloroplastic, PFAM = PF01643)' T '11.1.7' 'lipid metabolism.FA synthesis and FA elongation.ACP thioesterase' 'niben101scf10950_15490-19903' '(at1g08510 : 327.0) Encodes an acyl-acyl carrier protein thioesterase. Hydrolyzes primarily saturated acyl-ACPs with chain lengths that vary between 8 and 18 carbons. Involved in saturated fatty acid synthesis. Nuclear-encoded, plastid-targeted globular protein that is functional as dimer.; fatty acyl-ACP thioesterases B (FATB); CONTAINS InterPro DOMAIN/s: Acyl-ACP-thioesterase, N-terminal domain (InterPro:IPR021113), Acyl-ACP thioesterase (InterPro:IPR002864); BEST Arabidopsis thaliana protein match is: fatA acyl-ACP thioesterase (TAIR:AT3G25110.1); Has 1275 Blast hits to 1274 proteins in 533 species: Archae - 0; Bacteria - 944; Metazoa - 0; Fungi - 0; Plants - 322; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (q9sqi3|fatb_goshi : 320.0) Myristoyl-acyl carrier protein thioesterase, chloroplast precursor (EC 3.1.2.-) (16:0-acyl-carrier protein thioesterase) (16:0-ACP thioesterase) (Acyl-[acyl-carrier-protein] hydrolase) (PATE) - Gossypium hirsutum (Upland cotton) & (gnl|cdd|85587 : 268.0) no description available & (reliability: 654.0) & (original description: Putative FATA1, Description = Acyl-ACP thioesterase, PFAM = PF01643)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'nbv0.3scaffold1268_2316-34901' '(at5g35930 : 985.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: phosphopantetheine binding, acyl carrier activity, catalytic activity, AMP binding, cofactor binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Pyrrolo-quinoline quinone beta-propeller repeat (InterPro:IPR018391), Pyrrolo-quinoline quinone repeat (InterPro:IPR002372), AMP-dependent synthetase/ligase (InterPro:IPR000873), Phosphopantetheine attachment site (InterPro:IPR006162), Acyl carrier protein-like (InterPro:IPR009081), AMP-binding, conserved site (InterPro:IPR020845), Quinonprotein alcohol dehydrogenase-like (InterPro:IPR011047); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT3G16170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39848 : 339.0) no description available & (gnl|cdd|84817 : 251.0) no description available & (reliability: 1970.0) & (original description: Putative At5g35930, Description = Putative acyl-activating enzyme 19, PFAM = PF13360;PF13360;PF13193;PF00501)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'nbv0.3scaffold37668_1-4983' '(at5g36880 : 282.0) Encodes a plastidic acetyl-coA synthetase. This enzyme plays a role in converting acetate to acetyl-coA in the plastids. It does not appear to be a major contributor to fatty acid biosynthesis based on mutant phenotypes. The enzyme seems to act as a monomer and may play an important role in preventing the toxic accumulation of fermentation products including acetaldehyde, acetate, and ethanol. It participates in the pyruvate dehydrogenase bypass pathway; acetyl-CoA synthetase (ACS); FUNCTIONS IN: acetate-CoA ligase activity; INVOLVED IN: metabolic process, acetate metabolic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acetate--CoA ligase (InterPro:IPR011904), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 68981 Blast hits to 63577 proteins in 3326 species: Archae - 1100; Bacteria - 43606; Metazoa - 2469; Fungi - 2489; Plants - 1499; Viruses - 1; Other Eukaryotes - 17817 (source: NCBI BLink). & (gnl|cdd|36390 : 187.0) no description available & (gnl|cdd|81141 : 160.0) no description available & (reliability: 564.0) & (original description: Putative acss2l, Description = LOC568763 protein, PFAM = PF00501;PF16177)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'nbv0.5scaffold1965_358774-368102' '(at3g16170 : 541.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity, AMP binding; INVOLVED IN: metabolic process; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT3G48990.1); Has 81919 Blast hits to 74550 proteins in 3809 species: Archae - 1169; Bacteria - 53765; Metazoa - 3235; Fungi - 4485; Plants - 2227; Viruses - 1; Other Eukaryotes - 17037 (source: NCBI BLink). & (gnl|cdd|82253 : 290.0) no description available & (gnl|cdd|36391 : 246.0) no description available & (q42982|4cl2_orysa : 101.0) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Oryza sativa (Rice) & (reliability: 1082.0) & (original description: Putative fcs, Description = Acyl-CoA synthetase family member 3, mitochondrial, PFAM = PF13193;PF00501)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'nbv0.5scaffold3033_232506-235129' '(at1g55320 : 249.0) Encodes a protein with similarity to acyl activating enzymes. AAE18 is localized to the peroxisome where it may be involved in metabolism of auxin precursors to active auxins.; acyl-activating enzyme 18 (AAE18); FUNCTIONS IN: catalytic activity, ligase activity; INVOLVED IN: metabolic process, auxin metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 26488 Blast hits to 26111 proteins in 2320 species: Archae - 743; Bacteria - 16022; Metazoa - 855; Fungi - 842; Plants - 335; Viruses - 0; Other Eukaryotes - 7691 (source: NCBI BLink). & (gnl|cdd|36390 : 150.0) no description available & (gnl|cdd|30714 : 87.7) no description available & (reliability: 498.0) & (original description: Putative AAE17, Description = Acetyl-coenzyme A synthetase, PFAM = PF16177;PF00501)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'nbv0.5scaffold3033_235130-240616' '(at1g55320 : 479.0) Encodes a protein with similarity to acyl activating enzymes. AAE18 is localized to the peroxisome where it may be involved in metabolism of auxin precursors to active auxins.; acyl-activating enzyme 18 (AAE18); FUNCTIONS IN: catalytic activity, ligase activity; INVOLVED IN: metabolic process, auxin metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 26488 Blast hits to 26111 proteins in 2320 species: Archae - 743; Bacteria - 16022; Metazoa - 855; Fungi - 842; Plants - 335; Viruses - 0; Other Eukaryotes - 7691 (source: NCBI BLink). & (gnl|cdd|36390 : 229.0) no description available & (gnl|cdd|30714 : 119.0) no description available & (reliability: 958.0) & (original description: Putative acs, Description = Acetyl-coenzyme A synthetase, PFAM = PF00501)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben044scf00009193ctg005_23536-25764' '(at3g16910 : 471.0) Encodes a peroxisomal protein with acetyl-CoA synthetase activity that is responsible for the activation of acetate for entry into the glyoxylate cycle.; acyl-activating enzyme 7 (AAE7); FUNCTIONS IN: acetate-CoA ligase activity, AMP binding; INVOLVED IN: glyoxylate cycle, acetate metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 1 (TAIR:AT1G20560.1); Has 73044 Blast hits to 67204 proteins in 3521 species: Archae - 1140; Bacteria - 48125; Metazoa - 3129; Fungi - 3108; Plants - 2327; Viruses - 1; Other Eukaryotes - 15214 (source: NCBI BLink). & (gnl|cdd|82505 : 426.0) no description available & (gnl|cdd|36391 : 273.0) no description available & (q42982|4cl2_orysa : 89.0) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Oryza sativa (Rice) & (reliability: 942.0) & (original description: Putative alkK, Description = Acyl-CoA synthetase, PFAM = PF13193;PF00501)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben044scf00012536ctg009_1-6367' '(at3g16170 : 439.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity, AMP binding; INVOLVED IN: metabolic process; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT3G48990.1); Has 81919 Blast hits to 74550 proteins in 3809 species: Archae - 1169; Bacteria - 53765; Metazoa - 3235; Fungi - 4485; Plants - 2227; Viruses - 1; Other Eukaryotes - 17037 (source: NCBI BLink). & (gnl|cdd|82253 : 263.0) no description available & (gnl|cdd|36391 : 192.0) no description available & (q42982|4cl2_orysa : 85.1) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Oryza sativa (Rice) & (reliability: 878.0) & (original description: Putative acsf3, Description = Acyl-CoA synthetase family member 3, mitochondrial, PFAM = PF00501)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben044scf00012601ctg001_3878-12798' '(at5g23050 : 622.0) acyl-activating enzyme 17 (AAE17); FUNCTIONS IN: catalytic activity, ligase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 18 (TAIR:AT1G55320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36390 : 377.0) no description available & (gnl|cdd|30714 : 233.0) no description available & (reliability: 1244.0) & (original description: Putative acs, Description = Acetyl-coenzyme A synthetase, PFAM = PF00501)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben044scf00015761ctg003_310-11740' '(at1g21540 : 721.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT1G21530.2); Has 76629 Blast hits to 70171 proteins in 3593 species: Archae - 1132; Bacteria - 50179; Metazoa - 3309; Fungi - 3660; Plants - 2281; Viruses - 1; Other Eukaryotes - 16067 (source: NCBI BLink). & (gnl|cdd|82505 : 676.0) no description available & (gnl|cdd|36391 : 528.0) no description available & (o24145|4cl1_tobac : 179.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1442.0) & (original description: Putative AEE10, Description = Probable acyl-activating enzyme 10, PFAM = PF00501;PF13193)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben044scf00022436ctg006_8150-21157' '(at3g23790 : 871.0) acyl activating enzyme 16 (AAE16); FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding (InterPro:IPR020459), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 15 (TAIR:AT4G14070.1); Has 72182 Blast hits to 54949 proteins in 3465 species: Archae - 1133; Bacteria - 50819; Metazoa - 2739; Fungi - 2717; Plants - 2582; Viruses - 1; Other Eukaryotes - 12191 (source: NCBI BLink). & (gnl|cdd|36470 : 466.0) no description available & (gnl|cdd|31225 : 443.0) no description available & (q42982|4cl2_orysa : 85.9) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Oryza sativa (Rice) & (reliability: 1742.0) & (original description: Putative AAE16, Description = Probable acyl-activating enzyme 16, chloroplastic, PFAM = PF00501)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben044scf00022436ctg007_150-3643' '(at3g23790 : 90.1) acyl activating enzyme 16 (AAE16); FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding (InterPro:IPR020459), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 15 (TAIR:AT4G14070.1); Has 72182 Blast hits to 54949 proteins in 3465 species: Archae - 1133; Bacteria - 50819; Metazoa - 2739; Fungi - 2717; Plants - 2582; Viruses - 1; Other Eukaryotes - 12191 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative AAE15, Description = Long-chain-fatty-acid CoA ligase, putative, PFAM = )' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben044scf00050152ctg011_1-4383' '(at2g17650 : 783.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 1 (TAIR:AT1G20560.1); Has 73858 Blast hits to 68450 proteins in 3463 species: Archae - 1190; Bacteria - 48268; Metazoa - 3206; Fungi - 2755; Plants - 2089; Viruses - 1; Other Eukaryotes - 16349 (source: NCBI BLink). & (gnl|cdd|82505 : 765.0) no description available & (gnl|cdd|36391 : 507.0) no description available & (o24145|4cl1_tobac : 142.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1566.0) & (original description: Putative AAE2, Description = Probable acyl-activating enzyme 2, PFAM = PF13193;PF00501)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf00094_379735-388916' '(at3g16910 : 902.0) Encodes a peroxisomal protein with acetyl-CoA synthetase activity that is responsible for the activation of acetate for entry into the glyoxylate cycle.; acyl-activating enzyme 7 (AAE7); FUNCTIONS IN: acetate-CoA ligase activity, AMP binding; INVOLVED IN: glyoxylate cycle, acetate metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 1 (TAIR:AT1G20560.1); Has 73044 Blast hits to 67204 proteins in 3521 species: Archae - 1140; Bacteria - 48125; Metazoa - 3129; Fungi - 3108; Plants - 2327; Viruses - 1; Other Eukaryotes - 15214 (source: NCBI BLink). & (gnl|cdd|82505 : 774.0) no description available & (gnl|cdd|36391 : 492.0) no description available & (o24145|4cl1_tobac : 122.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1804.0) & (original description: Putative AAE7, Description = Acetate/butyrate--CoA ligase AAE7, peroxisomal, PFAM = PF00501;PF13193)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf00150_277702-294682' '(at1g55320 : 1014.0) Encodes a protein with similarity to acyl activating enzymes. AAE18 is localized to the peroxisome where it may be involved in metabolism of auxin precursors to active auxins.; acyl-activating enzyme 18 (AAE18); FUNCTIONS IN: catalytic activity, ligase activity; INVOLVED IN: metabolic process, auxin metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 26488 Blast hits to 26111 proteins in 2320 species: Archae - 743; Bacteria - 16022; Metazoa - 855; Fungi - 842; Plants - 335; Viruses - 0; Other Eukaryotes - 7691 (source: NCBI BLink). & (gnl|cdd|36390 : 494.0) no description available & (gnl|cdd|30714 : 267.0) no description available & (reliability: 2028.0) & (original description: Putative AAE18, Description = Probable acyl-activating enzyme 18, peroxisomal, PFAM = PF16177;PF00501)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf00595_964922-970690' '(at3g48990 : 786.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity, AMP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: apoplast, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G05160.1); Has 84840 Blast hits to 77127 proteins in 3761 species: Archae - 1146; Bacteria - 54375; Metazoa - 3415; Fungi - 4706; Plants - 2571; Viruses - 1; Other Eukaryotes - 18626 (source: NCBI BLink). & (gnl|cdd|36391 : 438.0) no description available & (gnl|cdd|30666 : 407.0) no description available & (o24145|4cl1_tobac : 172.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1572.0) & (original description: Putative AAE3, Description = Oxalate--CoA ligase, PFAM = PF13193;PF00501)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf02009_34571-70783' '(at1g21540 : 698.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT1G21530.2); Has 76629 Blast hits to 70171 proteins in 3593 species: Archae - 1132; Bacteria - 50179; Metazoa - 3309; Fungi - 3660; Plants - 2281; Viruses - 1; Other Eukaryotes - 16067 (source: NCBI BLink). & (gnl|cdd|82505 : 659.0) no description available & (gnl|cdd|36391 : 515.0) no description available & (o24145|4cl1_tobac : 187.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1396.0) & (original description: Putative alkK, Description = Acyl-CoA synthetase, PFAM = PF13193;PF00501)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf02009_58551-70786' '(at1g21540 : 698.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT1G21530.2); Has 76629 Blast hits to 70171 proteins in 3593 species: Archae - 1132; Bacteria - 50179; Metazoa - 3309; Fungi - 3660; Plants - 2281; Viruses - 1; Other Eukaryotes - 16067 (source: NCBI BLink). & (gnl|cdd|82505 : 659.0) no description available & (gnl|cdd|36391 : 515.0) no description available & (o24145|4cl1_tobac : 187.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1396.0) & (original description: Putative AEE9, Description = Probable acyl-activating enzyme 9, PFAM = PF00501;PF13193)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf02041_105028-110184' '(at2g17650 : 796.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 1 (TAIR:AT1G20560.1); Has 73858 Blast hits to 68450 proteins in 3463 species: Archae - 1190; Bacteria - 48268; Metazoa - 3206; Fungi - 2755; Plants - 2089; Viruses - 1; Other Eukaryotes - 16349 (source: NCBI BLink). & (gnl|cdd|82505 : 760.0) no description available & (gnl|cdd|36391 : 521.0) no description available & (o24145|4cl1_tobac : 143.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1592.0) & (original description: Putative AAE7, Description = Acetate/butyrate--CoA ligase AAE7, peroxisomal, PFAM = PF00501;PF13193)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf02072_269531-272904' '(at1g55320 : 171.0) Encodes a protein with similarity to acyl activating enzymes. AAE18 is localized to the peroxisome where it may be involved in metabolism of auxin precursors to active auxins.; acyl-activating enzyme 18 (AAE18); FUNCTIONS IN: catalytic activity, ligase activity; INVOLVED IN: metabolic process, auxin metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 26488 Blast hits to 26111 proteins in 2320 species: Archae - 743; Bacteria - 16022; Metazoa - 855; Fungi - 842; Plants - 335; Viruses - 0; Other Eukaryotes - 7691 (source: NCBI BLink). & (gnl|cdd|36390 : 126.0) no description available & (gnl|cdd|30714 : 91.1) no description available & (reliability: 342.0) & (original description: Putative AAE17, Description = Acetyl-coenzyme A synthetase, PFAM = )' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf02572_1162-12373' '(at3g16170 : 730.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity, AMP binding; INVOLVED IN: metabolic process; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT3G48990.1); Has 81919 Blast hits to 74550 proteins in 3809 species: Archae - 1169; Bacteria - 53765; Metazoa - 3235; Fungi - 4485; Plants - 2227; Viruses - 1; Other Eukaryotes - 17037 (source: NCBI BLink). & (gnl|cdd|82253 : 373.0) no description available & (gnl|cdd|36391 : 333.0) no description available & (o24145|4cl1_tobac : 125.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1460.0) & (original description: Putative ACSF3, Description = Acyl-CoA synthetase family member 3, mitochondrial, PFAM = PF00501;PF13193)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf03565_43918-49206' '(at3g48990 : 750.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity, AMP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: apoplast, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G05160.1); Has 84840 Blast hits to 77127 proteins in 3761 species: Archae - 1146; Bacteria - 54375; Metazoa - 3415; Fungi - 4706; Plants - 2571; Viruses - 1; Other Eukaryotes - 18626 (source: NCBI BLink). & (gnl|cdd|36391 : 445.0) no description available & (gnl|cdd|30666 : 415.0) no description available & (o24145|4cl1_tobac : 165.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1500.0) & (original description: Putative AAE3, Description = Oxalate--CoA ligase, PFAM = PF00501;PF13193)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf03888_95301-97772' '(at3g23790 : 176.0) acyl activating enzyme 16 (AAE16); FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding (InterPro:IPR020459), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 15 (TAIR:AT4G14070.1); Has 72182 Blast hits to 54949 proteins in 3465 species: Archae - 1133; Bacteria - 50819; Metazoa - 2739; Fungi - 2717; Plants - 2582; Viruses - 1; Other Eukaryotes - 12191 (source: NCBI BLink). & (gnl|cdd|36470 : 104.0) no description available & (gnl|cdd|31225 : 88.1) no description available & (reliability: 352.0) & (original description: Putative AAE15, Description = Long-chain-fatty-acid CoA ligase (AMP-forming), PFAM = )' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf03979_156010-180655' '(at5g36880 : 1150.0) Encodes a plastidic acetyl-coA synthetase. This enzyme plays a role in converting acetate to acetyl-coA in the plastids. It does not appear to be a major contributor to fatty acid biosynthesis based on mutant phenotypes. The enzyme seems to act as a monomer and may play an important role in preventing the toxic accumulation of fermentation products including acetaldehyde, acetate, and ethanol. It participates in the pyruvate dehydrogenase bypass pathway; acetyl-CoA synthetase (ACS); FUNCTIONS IN: acetate-CoA ligase activity; INVOLVED IN: metabolic process, acetate metabolic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acetate--CoA ligase (InterPro:IPR011904), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 68981 Blast hits to 63577 proteins in 3326 species: Archae - 1100; Bacteria - 43606; Metazoa - 2469; Fungi - 2489; Plants - 1499; Viruses - 1; Other Eukaryotes - 17817 (source: NCBI BLink). & (gnl|cdd|80858 : 859.0) no description available & (gnl|cdd|36390 : 803.0) no description available & (o24145|4cl1_tobac : 88.6) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 2300.0) & (original description: Putative acs, Description = Acetyl-coenzyme A synthetase, PFAM = PF16177;PF00501;PF13193)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf03979_157234-180631' '(at5g36880 : 950.0) Encodes a plastidic acetyl-coA synthetase. This enzyme plays a role in converting acetate to acetyl-coA in the plastids. It does not appear to be a major contributor to fatty acid biosynthesis based on mutant phenotypes. The enzyme seems to act as a monomer and may play an important role in preventing the toxic accumulation of fermentation products including acetaldehyde, acetate, and ethanol. It participates in the pyruvate dehydrogenase bypass pathway; acetyl-CoA synthetase (ACS); FUNCTIONS IN: acetate-CoA ligase activity; INVOLVED IN: metabolic process, acetate metabolic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acetate--CoA ligase (InterPro:IPR011904), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 68981 Blast hits to 63577 proteins in 3326 species: Archae - 1100; Bacteria - 43606; Metazoa - 2469; Fungi - 2489; Plants - 1499; Viruses - 1; Other Eukaryotes - 17817 (source: NCBI BLink). & (gnl|cdd|80858 : 677.0) no description available & (gnl|cdd|36390 : 641.0) no description available & (reliability: 1900.0) & (original description: Putative acs, Description = Acetyl-coenzyme A synthetase, PFAM = PF16177;PF00501)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf04020_67046-71181' '(gnl|cdd|82505 : 738.0) no description available & (at1g65880 : 672.0) Encodes a benzoate-CoA ligase. Involved in the biosynthesis of benzoyloxyglucosinolate in Arabidopsis seeds.; benzoyloxyglucosinolate 1 (BZO1); CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 12 (TAIR:AT1G65890.1); Has 76758 Blast hits to 70084 proteins in 3572 species: Archae - 1128; Bacteria - 49908; Metazoa - 3256; Fungi - 3775; Plants - 2105; Viruses - 1; Other Eukaryotes - 16585 (source: NCBI BLink). & (gnl|cdd|36391 : 521.0) no description available & (o24145|4cl1_tobac : 137.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1338.0) & (original description: Putative AAE20, Description = Benzoate--CoA ligase, peroxisomal, PFAM = PF13193;PF00501)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf04020_275533-279903' '(gnl|cdd|82505 : 734.0) no description available & (at1g66120 : 662.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: embryo, sepal, male gametophyte, carpel, stamen; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 12 (TAIR:AT1G65890.1); Has 78414 Blast hits to 71735 proteins in 3650 species: Archae - 1135; Bacteria - 51527; Metazoa - 3303; Fungi - 3365; Plants - 2332; Viruses - 1; Other Eukaryotes - 16751 (source: NCBI BLink). & (gnl|cdd|36391 : 516.0) no description available & (q42982|4cl2_orysa : 143.0) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Oryza sativa (Rice) & (reliability: 1324.0) & (original description: Putative AAE, Description = Acyl-activating enzyme-like protein, PFAM = PF00501;PF13193)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf05827_178462-193832' '(at5g23050 : 889.0) acyl-activating enzyme 17 (AAE17); FUNCTIONS IN: catalytic activity, ligase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 18 (TAIR:AT1G55320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36390 : 423.0) no description available & (gnl|cdd|30714 : 237.0) no description available & (reliability: 1778.0) & (original description: Putative AAE17, Description = Probable acyl-activating enzyme 17, peroxisomal, PFAM = PF00501)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf05910_13901-17553' '(at5g16340 : 758.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 5 (TAIR:AT5G16370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|82505 : 699.0) no description available & (gnl|cdd|36391 : 543.0) no description available & (q42982|4cl2_orysa : 172.0) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Oryza sativa (Rice) & (reliability: 1516.0) & (original description: Putative AAE6, Description = Probable acyl-activating enzyme 6, PFAM = PF13193;PF00501)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf07601_85090-112948' '(at5g36880 : 1220.0) Encodes a plastidic acetyl-coA synthetase. This enzyme plays a role in converting acetate to acetyl-coA in the plastids. It does not appear to be a major contributor to fatty acid biosynthesis based on mutant phenotypes. The enzyme seems to act as a monomer and may play an important role in preventing the toxic accumulation of fermentation products including acetaldehyde, acetate, and ethanol. It participates in the pyruvate dehydrogenase bypass pathway; acetyl-CoA synthetase (ACS); FUNCTIONS IN: acetate-CoA ligase activity; INVOLVED IN: metabolic process, acetate metabolic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acetate--CoA ligase (InterPro:IPR011904), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 68981 Blast hits to 63577 proteins in 3326 species: Archae - 1100; Bacteria - 43606; Metazoa - 2469; Fungi - 2489; Plants - 1499; Viruses - 1; Other Eukaryotes - 17817 (source: NCBI BLink). & (gnl|cdd|80858 : 842.0) no description available & (gnl|cdd|36390 : 797.0) no description available & (reliability: 2440.0) & (original description: Putative acs, Description = Acetyl-coenzyme A synthetase, PFAM = PF13193;PF16177;PF00501)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf08415_41803-48219' '(at3g48990 : 786.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity, AMP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: apoplast, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G05160.1); Has 84840 Blast hits to 77127 proteins in 3761 species: Archae - 1146; Bacteria - 54375; Metazoa - 3415; Fungi - 4706; Plants - 2571; Viruses - 1; Other Eukaryotes - 18626 (source: NCBI BLink). & (gnl|cdd|36391 : 445.0) no description available & (gnl|cdd|30666 : 414.0) no description available & (o24145|4cl1_tobac : 175.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1572.0) & (original description: Putative AAE3, Description = Oxalate--CoA ligase, PFAM = PF00501;PF13193)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf08575_283695-287347' '(at5g16370 : 655.0) acyl activating enzyme 5 (AAE5); FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT5G16340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|82505 : 647.0) no description available & (gnl|cdd|36391 : 527.0) no description available & (o24145|4cl1_tobac : 128.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1310.0) & (original description: Putative AAE5, Description = Probable acyl-activating enzyme 5, peroxisomal, PFAM = PF13193;PF00501)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf09203_169270-176966' '(at3g16910 : 886.0) Encodes a peroxisomal protein with acetyl-CoA synthetase activity that is responsible for the activation of acetate for entry into the glyoxylate cycle.; acyl-activating enzyme 7 (AAE7); FUNCTIONS IN: acetate-CoA ligase activity, AMP binding; INVOLVED IN: glyoxylate cycle, acetate metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 1 (TAIR:AT1G20560.1); Has 73044 Blast hits to 67204 proteins in 3521 species: Archae - 1140; Bacteria - 48125; Metazoa - 3129; Fungi - 3108; Plants - 2327; Viruses - 1; Other Eukaryotes - 15214 (source: NCBI BLink). & (gnl|cdd|82505 : 794.0) no description available & (gnl|cdd|36391 : 494.0) no description available & (o24145|4cl1_tobac : 132.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1772.0) & (original description: Putative AAE7, Description = Acetate/butyrate--CoA ligase AAE7, peroxisomal, PFAM = PF13193;PF00501)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf09291_82733-88313' '(at2g17650 : 804.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 1 (TAIR:AT1G20560.1); Has 73858 Blast hits to 68450 proteins in 3463 species: Archae - 1190; Bacteria - 48268; Metazoa - 3206; Fungi - 2755; Plants - 2089; Viruses - 1; Other Eukaryotes - 16349 (source: NCBI BLink). & (gnl|cdd|82505 : 757.0) no description available & (gnl|cdd|36391 : 526.0) no description available & (o24145|4cl1_tobac : 155.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1608.0) & (original description: Putative AAE2, Description = Probable acyl-activating enzyme 2, PFAM = PF13193;PF00501)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf09442_18199-26791' '(at2g17650 : 728.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 1 (TAIR:AT1G20560.1); Has 73858 Blast hits to 68450 proteins in 3463 species: Archae - 1190; Bacteria - 48268; Metazoa - 3206; Fungi - 2755; Plants - 2089; Viruses - 1; Other Eukaryotes - 16349 (source: NCBI BLink). & (gnl|cdd|82505 : 712.0) no description available & (gnl|cdd|36391 : 484.0) no description available & (o24145|4cl1_tobac : 130.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1456.0) & (original description: Putative acsB, Description = Acyl-CoA synthetase, PFAM = PF13193;PF00501)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf09442_76926-101926' '(gnl|cdd|82505 : 609.0) no description available & (at1g20560 : 538.0) acyl activating enzyme 1 (AAE1); FUNCTIONS IN: AMP binding; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT2G17650.1); Has 73688 Blast hits to 67811 proteins in 3570 species: Archae - 1118; Bacteria - 49573; Metazoa - 3114; Fungi - 3286; Plants - 2213; Viruses - 1; Other Eukaryotes - 14383 (source: NCBI BLink). & (gnl|cdd|36391 : 418.0) no description available & (o24145|4cl1_tobac : 134.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1076.0) & (original description: Putative AAE1, Description = Probable acyl-activating enzyme 1, peroxisomal, PFAM = PF00501;PF13193)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf10608_60617-80649' '(at3g23790 : 957.0) acyl activating enzyme 16 (AAE16); FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding (InterPro:IPR020459), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 15 (TAIR:AT4G14070.1); Has 72182 Blast hits to 54949 proteins in 3465 species: Archae - 1133; Bacteria - 50819; Metazoa - 2739; Fungi - 2717; Plants - 2582; Viruses - 1; Other Eukaryotes - 12191 (source: NCBI BLink). & (gnl|cdd|36470 : 486.0) no description available & (gnl|cdd|31225 : 447.0) no description available & (o24145|4cl1_tobac : 87.4) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1914.0) & (original description: Putative AAE16, Description = Probable acyl-activating enzyme 16, chloroplastic, PFAM = PF00501)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf11341_45802-57145' '(at5g23050 : 873.0) acyl-activating enzyme 17 (AAE17); FUNCTIONS IN: catalytic activity, ligase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 18 (TAIR:AT1G55320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36390 : 458.0) no description available & (gnl|cdd|30714 : 264.0) no description available & (reliability: 1746.0) & (original description: Putative AAE17, Description = Probable acyl-activating enzyme 17, peroxisomal, PFAM = PF00501)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf12935_140840-147963' '(at1g20560 : 829.0) acyl activating enzyme 1 (AAE1); FUNCTIONS IN: AMP binding; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT2G17650.1); Has 73688 Blast hits to 67811 proteins in 3570 species: Archae - 1118; Bacteria - 49573; Metazoa - 3114; Fungi - 3286; Plants - 2213; Viruses - 1; Other Eukaryotes - 14383 (source: NCBI BLink). & (gnl|cdd|82505 : 779.0) no description available & (gnl|cdd|36391 : 528.0) no description available & (o24145|4cl1_tobac : 143.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1658.0) & (original description: Putative AAE1, Description = Probable acyl-activating enzyme 1, peroxisomal, PFAM = PF13193;PF00501)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf13411_214811-219150' '(gnl|cdd|82505 : 748.0) no description available & (at2g17650 : 722.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 1 (TAIR:AT1G20560.1); Has 73858 Blast hits to 68450 proteins in 3463 species: Archae - 1190; Bacteria - 48268; Metazoa - 3206; Fungi - 2755; Plants - 2089; Viruses - 1; Other Eukaryotes - 16349 (source: NCBI BLink). & (gnl|cdd|36391 : 505.0) no description available & (o24145|4cl1_tobac : 132.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1444.0) & (original description: Putative 4CL, Description = Acyl-CoA synthetase, PFAM = PF13193;PF00501)' T '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'niben101scf39201_2005-11520' '(at3g16170 : 739.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity, AMP binding; INVOLVED IN: metabolic process; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT3G48990.1); Has 81919 Blast hits to 74550 proteins in 3809 species: Archae - 1169; Bacteria - 53765; Metazoa - 3235; Fungi - 4485; Plants - 2227; Viruses - 1; Other Eukaryotes - 17037 (source: NCBI BLink). & (gnl|cdd|30666 : 363.0) no description available & (gnl|cdd|36391 : 317.0) no description available & (o24145|4cl1_tobac : 125.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1478.0) & (original description: Putative AAE13, Description = Malonate--CoA ligase, PFAM = PF00501;PF13193)' T '11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'nbv0.3scaffold6366_18904-28511' '(at1g77590 : 1100.0) Encodes major plastidic long chain acyl-CoA synthetase with a slight substrate preference of oleic acid over any of the other fatty acids.; long chain acyl-CoA synthetase 9 (LACS9); FUNCTIONS IN: long-chain fatty acid-CoA ligase activity; INVOLVED IN: fatty acid metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT2G04350.2); Has 68698 Blast hits to 57242 proteins in 3549 species: Archae - 1129; Bacteria - 47028; Metazoa - 2860; Fungi - 3365; Plants - 2152; Viruses - 2; Other Eukaryotes - 12162 (source: NCBI BLink). & (gnl|cdd|36395 : 911.0) no description available & (gnl|cdd|31225 : 450.0) no description available & (reliability: 2200.0) & (original description: Putative LACS9, Description = Long chain acyl-CoA synthetase 9, chloroplastic, PFAM = PF00501)' T '11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'nbv0.5scaffold6508_9566-25061' '(at4g23850 : 956.0) long-chain acyl-CoA synthetase 4 (LACS4); FUNCTIONS IN: catalytic activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G11030.1); Has 52797 Blast hits to 49694 proteins in 3271 species: Archae - 966; Bacteria - 33480; Metazoa - 2301; Fungi - 1946; Plants - 2035; Viruses - 1; Other Eukaryotes - 12068 (source: NCBI BLink). & (gnl|cdd|36470 : 749.0) no description available & (gnl|cdd|31225 : 438.0) no description available & (o24145|4cl1_tobac : 99.4) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1912.0) & (original description: Putative LACS4, Description = Long chain acyl-CoA synthetase 4, PFAM = PF00501)' T '11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'niben044scf00000522ctg006_3094-13677' '(at4g23850 : 1085.0) long-chain acyl-CoA synthetase 4 (LACS4); FUNCTIONS IN: catalytic activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G11030.1); Has 52797 Blast hits to 49694 proteins in 3271 species: Archae - 966; Bacteria - 33480; Metazoa - 2301; Fungi - 1946; Plants - 2035; Viruses - 1; Other Eukaryotes - 12068 (source: NCBI BLink). & (gnl|cdd|36470 : 813.0) no description available & (gnl|cdd|31225 : 447.0) no description available & (o24145|4cl1_tobac : 96.7) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 2170.0) & (original description: Putative LACS4, Description = Long chain acyl-CoA synthetase 4, PFAM = PF00501)' T '11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'niben044scf00012208ctg019_6409-15292' '(at2g04350 : 859.0) long-chain acyl-CoA synthetase 8 (LACS8); FUNCTIONS IN: long-chain fatty acid-CoA ligase activity, catalytic activity; INVOLVED IN: fatty acid biosynthetic process, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: long chain acyl-CoA synthetase 9 (TAIR:AT1G77590.1); Has 68120 Blast hits to 56487 proteins in 3592 species: Archae - 1085; Bacteria - 46156; Metazoa - 2682; Fungi - 3484; Plants - 2089; Viruses - 2; Other Eukaryotes - 12622 (source: NCBI BLink). & (gnl|cdd|36395 : 753.0) no description available & (gnl|cdd|31225 : 388.0) no description available & (reliability: 1718.0) & (original description: Putative acsl4, Description = LOC100174803 protein, PFAM = PF00501)' T '11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'niben044scf00014597ctg000_8037-17538' '(at1g49430 : 958.0) Encodes a long chain acyl-CoA synthetase that catalyzes the synthesis of omega-hydroxy fatty acyl-CoA intermediates in the pathway to cutin synthesis. Required for repression of lateral root formation.; long-chain acyl-CoA synthetase 2 (LACS2); CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT1G64400.1); Has 53337 Blast hits to 50359 proteins in 3209 species: Archae - 917; Bacteria - 34261; Metazoa - 2388; Fungi - 2032; Plants - 1855; Viruses - 1; Other Eukaryotes - 11883 (source: NCBI BLink). & (gnl|cdd|36470 : 713.0) no description available & (gnl|cdd|31225 : 442.0) no description available & (o24145|4cl1_tobac : 108.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1916.0) & (original description: Putative LACS2, Description = Long chain acyl-CoA synthetase 2, PFAM = PF00501)' T '11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'niben101scf00793_93931-101030' '(at2g47240 : 922.0) Encodes an acyl-CoA synthetase that acts on long-chain and very-long-chain fatty acids, involved in cuticular wax and cutin biosynthesis; LONG-CHAIN ACYL-COA SYNTHASE 1 (LACS1); FUNCTIONS IN: long-chain fatty acid-CoA ligase activity, very long-chain fatty acid-CoA ligase activity; INVOLVED IN: fatty acid biosynthetic process, cutin biosynthetic process, wax biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G23850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36470 : 727.0) no description available & (gnl|cdd|31225 : 464.0) no description available & (q42982|4cl2_orysa : 91.3) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Oryza sativa (Rice) & (reliability: 1844.0) & (original description: Putative LACS1, Description = Long chain acyl-CoA synthetase 1, PFAM = PF00501)' T '11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'niben101scf01434_132419-147952' '(at5g27600 : 1130.0) Encode peroxisomal long-chain acyl-CoA synthetase. Activates fatty acids for further metabolism. Interacts with PEX5.; long-chain acyl-CoA synthetase 7 (LACS7); FUNCTIONS IN: protein binding, long-chain fatty acid-CoA ligase activity; INVOLVED IN: response to salt stress, long-chain fatty acid metabolic process, response to ozone; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: long-chain acyl-CoA synthetase 6 (TAIR:AT3G05970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36470 : 756.0) no description available & (gnl|cdd|31225 : 480.0) no description available & (p14912|4cl1_petcr : 116.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (reliability: 2260.0) & (original description: Putative LACS7, Description = Long chain acyl-CoA synthetase 7, peroxisomal, PFAM = PF00501)' T '11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'niben101scf01434_145500-148029' '(at5g27600 : 146.0) Encode peroxisomal long-chain acyl-CoA synthetase. Activates fatty acids for further metabolism. Interacts with PEX5.; long-chain acyl-CoA synthetase 7 (LACS7); FUNCTIONS IN: protein binding, long-chain fatty acid-CoA ligase activity; INVOLVED IN: response to salt stress, long-chain fatty acid metabolic process, response to ozone; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: long-chain acyl-CoA synthetase 6 (TAIR:AT3G05970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36470 : 93.4) no description available & (reliability: 292.0) & (original description: Putative LACS1, Description = Hypothetical_protein, PFAM = )' T '11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'niben101scf02790_376189-384935' '(at2g04350 : 1061.0) long-chain acyl-CoA synthetase 8 (LACS8); FUNCTIONS IN: long-chain fatty acid-CoA ligase activity, catalytic activity; INVOLVED IN: fatty acid biosynthetic process, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: long chain acyl-CoA synthetase 9 (TAIR:AT1G77590.1); Has 68120 Blast hits to 56487 proteins in 3592 species: Archae - 1085; Bacteria - 46156; Metazoa - 2682; Fungi - 3484; Plants - 2089; Viruses - 2; Other Eukaryotes - 12622 (source: NCBI BLink). & (gnl|cdd|36395 : 910.0) no description available & (gnl|cdd|31225 : 446.0) no description available & (reliability: 2122.0) & (original description: Putative LACS8, Description = Long chain acyl-CoA synthetase 8, PFAM = PF00501)' T '11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'niben101scf02972_127950-138780' '(at4g23850 : 1048.0) long-chain acyl-CoA synthetase 4 (LACS4); FUNCTIONS IN: catalytic activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G11030.1); Has 52797 Blast hits to 49694 proteins in 3271 species: Archae - 966; Bacteria - 33480; Metazoa - 2301; Fungi - 1946; Plants - 2035; Viruses - 1; Other Eukaryotes - 12068 (source: NCBI BLink). & (gnl|cdd|36470 : 815.0) no description available & (gnl|cdd|31225 : 454.0) no description available & (o24145|4cl1_tobac : 99.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 2096.0) & (original description: Putative LACS4, Description = Long chain acyl-CoA synthetase 4, PFAM = PF00501)' T '11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'niben101scf04727_796471-806384' '(at2g04350 : 1063.0) long-chain acyl-CoA synthetase 8 (LACS8); FUNCTIONS IN: long-chain fatty acid-CoA ligase activity, catalytic activity; INVOLVED IN: fatty acid biosynthetic process, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: long chain acyl-CoA synthetase 9 (TAIR:AT1G77590.1); Has 68120 Blast hits to 56487 proteins in 3592 species: Archae - 1085; Bacteria - 46156; Metazoa - 2682; Fungi - 3484; Plants - 2089; Viruses - 2; Other Eukaryotes - 12622 (source: NCBI BLink). & (gnl|cdd|36395 : 904.0) no description available & (gnl|cdd|31225 : 443.0) no description available & (reliability: 2126.0) & (original description: Putative LACS8, Description = Long chain acyl-CoA synthetase 8, PFAM = PF00501)' T '11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'niben101scf04968_930-25623' '(at4g23850 : 585.0) long-chain acyl-CoA synthetase 4 (LACS4); FUNCTIONS IN: catalytic activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G11030.1); Has 52797 Blast hits to 49694 proteins in 3271 species: Archae - 966; Bacteria - 33480; Metazoa - 2301; Fungi - 1946; Plants - 2035; Viruses - 1; Other Eukaryotes - 12068 (source: NCBI BLink). & (gnl|cdd|36470 : 425.0) no description available & (gnl|cdd|31225 : 208.0) no description available & (reliability: 1170.0) & (original description: Putative bvACS, Description = Long-Chain Acyl-CoA Synthetase, PFAM = PF00501)' T '11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'niben101scf05534_227152-236075' '(at1g77590 : 1056.0) Encodes major plastidic long chain acyl-CoA synthetase with a slight substrate preference of oleic acid over any of the other fatty acids.; long chain acyl-CoA synthetase 9 (LACS9); FUNCTIONS IN: long-chain fatty acid-CoA ligase activity; INVOLVED IN: fatty acid metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT2G04350.2); Has 68698 Blast hits to 57242 proteins in 3549 species: Archae - 1129; Bacteria - 47028; Metazoa - 2860; Fungi - 3365; Plants - 2152; Viruses - 2; Other Eukaryotes - 12162 (source: NCBI BLink). & (gnl|cdd|36395 : 907.0) no description available & (gnl|cdd|31225 : 445.0) no description available & (reliability: 2112.0) & (original description: Putative LACS9, Description = Long chain acyl-CoA synthetase 9, chloroplastic, PFAM = PF00501)' T '11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'niben101scf14323_95290-110210' '(at4g23850 : 1099.0) long-chain acyl-CoA synthetase 4 (LACS4); FUNCTIONS IN: catalytic activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G11030.1); Has 52797 Blast hits to 49694 proteins in 3271 species: Archae - 966; Bacteria - 33480; Metazoa - 2301; Fungi - 1946; Plants - 2035; Viruses - 1; Other Eukaryotes - 12068 (source: NCBI BLink). & (gnl|cdd|36470 : 826.0) no description available & (gnl|cdd|31225 : 457.0) no description available & (o24145|4cl1_tobac : 98.6) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 2198.0) & (original description: Putative LACS4, Description = Long chain acyl-CoA synthetase 4, PFAM = PF00501)' T '11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'nbv0.3scaffold4733_5056-8483' '(at2g26640 : 803.0) Encodes KCS11, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 11 (KCS11); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: response to cold, response to light stimulus, response to osmotic stress; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 2 (TAIR:AT1G04220.1); Has 3664 Blast hits to 3650 proteins in 908 species: Archae - 0; Bacteria - 1588; Metazoa - 0; Fungi - 2; Plants - 1914; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|87517 : 454.0) no description available & (reliability: 1606.0) & (original description: Putative KCS11, Description = 3-ketoacyl-CoA synthase 11, PFAM = PF08541;PF08392;PF08392)' T '11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'nbv0.5scaffold1705_333162-338489' '(at1g04220 : 454.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 359.0) no description available & (reliability: 908.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T '11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben044scf00044912ctg007_1-9678' '(at1g04220 : 642.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 441.0) no description available & (reliability: 1284.0) & (original description: Putative KCS2, Description = 3-ketoacyl-CoA synthase 2, PFAM = PF08392;PF08541)' T '11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf02329_151914-155314' '(at1g07720 : 676.0) Encodes KCS3, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 3 (KCS3); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: response to cold, response to light stimulus, response to osmotic stress; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 12 (TAIR:AT2G28630.1); Has 2897 Blast hits to 2863 proteins in 795 species: Archae - 0; Bacteria - 1421; Metazoa - 0; Fungi - 2; Plants - 1311; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|87517 : 381.0) no description available & (reliability: 1352.0) & (original description: Putative KCS3, Description = 3-ketoacyl-CoA synthase 3, PFAM = PF08392;PF08541)' T '11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf02339_96170-101179' '(at2g26640 : 820.0) Encodes KCS11, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 11 (KCS11); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: response to cold, response to light stimulus, response to osmotic stress; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 2 (TAIR:AT1G04220.1); Has 3664 Blast hits to 3650 proteins in 908 species: Archae - 0; Bacteria - 1588; Metazoa - 0; Fungi - 2; Plants - 1914; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|87517 : 542.0) no description available & (reliability: 1640.0) & (original description: Putative KCS2, Description = 3-ketoacyl-CoA synthase 2, PFAM = PF08392;PF08541)' T '11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf04082_46852-50926' '(at1g04220 : 640.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 438.0) no description available & (reliability: 1280.0) & (original description: Putative afi, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T '11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf04944_116710-120242' '(at2g26640 : 863.0) Encodes KCS11, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 11 (KCS11); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: response to cold, response to light stimulus, response to osmotic stress; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 2 (TAIR:AT1G04220.1); Has 3664 Blast hits to 3650 proteins in 908 species: Archae - 0; Bacteria - 1588; Metazoa - 0; Fungi - 2; Plants - 1914; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|87517 : 542.0) no description available & (reliability: 1726.0) & (original description: Putative KCS11, Description = 3-ketoacyl-CoA synthase 11, PFAM = PF08541;PF08392)' T '11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf05676_698542-701939' '(at2g28630 : 685.0) Encodes KCS12, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 12 (KCS12); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: response to osmotic stress; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 3 (TAIR:AT1G07720.1); Has 2195 Blast hits to 2173 proteins in 528 species: Archae - 0; Bacteria - 1011; Metazoa - 0; Fungi - 4; Plants - 1037; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|87517 : 396.0) no description available & (reliability: 1370.0) & (original description: Putative KCS12, Description = 3-ketoacyl-CoA synthase 12, PFAM = PF08392;PF08541)' T '11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf06722_65212-68612' '(at1g07720 : 684.0) Encodes KCS3, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 3 (KCS3); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: response to cold, response to light stimulus, response to osmotic stress; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 12 (TAIR:AT2G28630.1); Has 2897 Blast hits to 2863 proteins in 795 species: Archae - 0; Bacteria - 1421; Metazoa - 0; Fungi - 2; Plants - 1311; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|87517 : 381.0) no description available & (reliability: 1368.0) & (original description: Putative KCS3, Description = 3-ketoacyl-CoA synthase 3, PFAM = PF08392;PF08541)' T '11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf06901_124485-129521' '(at2g26640 : 794.0) Encodes KCS11, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 11 (KCS11); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: response to cold, response to light stimulus, response to osmotic stress; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 2 (TAIR:AT1G04220.1); Has 3664 Blast hits to 3650 proteins in 908 species: Archae - 0; Bacteria - 1588; Metazoa - 0; Fungi - 2; Plants - 1914; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|87517 : 527.0) no description available & (reliability: 1588.0) & (original description: Putative KCS2, Description = 3-ketoacyl-CoA synthase 2, PFAM = PF08392;PF08541)' T '11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf08328_84619-87753' '(at2g26640 : 848.0) Encodes KCS11, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 11 (KCS11); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: response to cold, response to light stimulus, response to osmotic stress; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 2 (TAIR:AT1G04220.1); Has 3664 Blast hits to 3650 proteins in 908 species: Archae - 0; Bacteria - 1588; Metazoa - 0; Fungi - 2; Plants - 1914; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|87517 : 523.0) no description available & (reliability: 1696.0) & (original description: Putative KCS11, Description = 3-ketoacyl-CoA synthase 11, PFAM = PF08541;PF08392)' T '11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf08351_412362-416895' '(at1g04220 : 430.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 368.0) no description available & (reliability: 860.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T '11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf08351_466175-472362' '(at1g04220 : 442.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 359.0) no description available & (reliability: 884.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T '11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf08470_28730-32608' '(at1g04220 : 613.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 433.0) no description available & (reliability: 1226.0) & (original description: Putative afi, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T '11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf08523_90041-93576' '(at2g26640 : 888.0) Encodes KCS11, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 11 (KCS11); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: response to cold, response to light stimulus, response to osmotic stress; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 2 (TAIR:AT1G04220.1); Has 3664 Blast hits to 3650 proteins in 908 species: Archae - 0; Bacteria - 1588; Metazoa - 0; Fungi - 2; Plants - 1914; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|87517 : 549.0) no description available & (reliability: 1776.0) & (original description: Putative KCS11, Description = 3-ketoacyl-CoA synthase 11, PFAM = PF08392;PF08541)' T '11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf08526_1752-5359' '(at2g16280 : 360.0) Encodes KCS9, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 9 (KCS9); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: response to cold, response to light stimulus, very long-chain fatty acid metabolic process, response to osmotic stress, cuticle development; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 4 (TAIR:AT1G19440.1); Has 4705 Blast hits to 4688 proteins in 1155 species: Archae - 0; Bacteria - 1679; Metazoa - 0; Fungi - 8; Plants - 2880; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|87517 : 344.0) no description available & (reliability: 688.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T '11.1.10' 'lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase' 'niben101scf09024_64533-70374' '(at1g01120 : 832.0) Encodes a condensing enzyme KCS1 (3-ketoacyl-CoA synthase 1) which is involved in the critical fatty acid elongation process in wax biosynthesis.; 3-ketoacyl-CoA synthase 1 (KCS1); FUNCTIONS IN: fatty acid elongase activity, acyltransferase activity; INVOLVED IN: in 7 processes; LOCATED IN: cytosolic ribosome, endoplasmic reticulum, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 11 (TAIR:AT2G26640.1); Has 3961 Blast hits to 3946 proteins in 966 species: Archae - 0; Bacteria - 1388; Metazoa - 0; Fungi - 5; Plants - 2408; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|87517 : 512.0) no description available & (reliability: 1664.0) & (original description: Putative KCS1, Description = 3-ketoacyl-CoA synthase 1, PFAM = PF08392;PF08541)' T '11.1.11' 'lipid metabolism.FA synthesis and FA elongation.fatty acid elongase' 'nbv0.5scaffold1705_333162-338489' '(at1g04220 : 454.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 359.0) no description available & (reliability: 852.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T '11.1.11' 'lipid metabolism.FA synthesis and FA elongation.fatty acid elongase' 'niben101scf02348_69110-75723' '(at4g24510 : 287.0) Involved in C28 to C30 fatty acid elongation.; ECERIFERUM 2 (CER2); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: wax biosynthetic process; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT4G13840.1); Has 1252 Blast hits to 1252 proteins in 85 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 10; Plants - 1240; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66174 : 119.0) no description available & (reliability: 574.0) & (original description: Putative CER2, Description = Protein ECERIFERUM 1, PFAM = PF02458)' T '11.1.11' 'lipid metabolism.FA synthesis and FA elongation.fatty acid elongase' 'niben101scf08351_412362-416895' '(at1g04220 : 430.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 368.0) no description available & (reliability: 810.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T '11.1.11' 'lipid metabolism.FA synthesis and FA elongation.fatty acid elongase' 'niben101scf08351_466175-472362' '(at1g04220 : 442.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 359.0) no description available & (reliability: 844.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T '11.1.11' 'lipid metabolism.FA synthesis and FA elongation.fatty acid elongase' 'niben101scf08526_1752-5359' '(at2g16280 : 360.0) Encodes KCS9, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 9 (KCS9); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: response to cold, response to light stimulus, very long-chain fatty acid metabolic process, response to osmotic stress, cuticle development; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 4 (TAIR:AT1G19440.1); Has 4705 Blast hits to 4688 proteins in 1155 species: Archae - 0; Bacteria - 1679; Metazoa - 0; Fungi - 8; Plants - 2880; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|87517 : 344.0) no description available & (reliability: 714.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T '11.1.12' 'lipid metabolism.FA synthesis and FA elongation.ACP protein' 'nbv0.5scaffold220_868382-877951' '(at1g65290 : 163.0) Encodes a member of the mitochondrial acyl carrier protein (ACP) family. As part of the mitochondrial matrix, it is likely to be involved in fatty acid or lipoic acid biogenesis.; mitochondrial acyl carrier protein 2 (mtACP2); FUNCTIONS IN: acyl carrier activity, cobalt ion binding, metal ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein (ACP) (InterPro:IPR003231), Acyl carrier protein-like (InterPro:IPR009081), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: mitochondrial acyl carrier protein 1 (TAIR:AT2G44620.1); Has 8213 Blast hits to 8212 proteins in 2586 species: Archae - 0; Bacteria - 5604; Metazoa - 204; Fungi - 144; Plants - 365; Viruses - 2; Other Eukaryotes - 1894 (source: NCBI BLink). & (gnl|cdd|36959 : 118.0) no description available & (reliability: 326.0) & (original description: Putative acp, Description = Acyl carrier protein, PFAM = PF00550)' T '11.1.12' 'lipid metabolism.FA synthesis and FA elongation.ACP protein' 'nbv0.5scaffold3735_183566-189377' '(gnl|cdd|36959 : 98.4) no description available & (at1g65290 : 97.8) Encodes a member of the mitochondrial acyl carrier protein (ACP) family. As part of the mitochondrial matrix, it is likely to be involved in fatty acid or lipoic acid biogenesis.; mitochondrial acyl carrier protein 2 (mtACP2); FUNCTIONS IN: acyl carrier activity, cobalt ion binding, metal ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein (ACP) (InterPro:IPR003231), Acyl carrier protein-like (InterPro:IPR009081), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: mitochondrial acyl carrier protein 1 (TAIR:AT2G44620.1); Has 8213 Blast hits to 8212 proteins in 2586 species: Archae - 0; Bacteria - 5604; Metazoa - 204; Fungi - 144; Plants - 365; Viruses - 2; Other Eukaryotes - 1894 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative acp, Description = Acyl carrier protein, PFAM = PF00550)' T '11.1.12' 'lipid metabolism.FA synthesis and FA elongation.ACP protein' 'niben044scf00000261ctg002_1725-11184' '(at1g65290 : 181.0) Encodes a member of the mitochondrial acyl carrier protein (ACP) family. As part of the mitochondrial matrix, it is likely to be involved in fatty acid or lipoic acid biogenesis.; mitochondrial acyl carrier protein 2 (mtACP2); FUNCTIONS IN: acyl carrier activity, cobalt ion binding, metal ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein (ACP) (InterPro:IPR003231), Acyl carrier protein-like (InterPro:IPR009081), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: mitochondrial acyl carrier protein 1 (TAIR:AT2G44620.1); Has 8213 Blast hits to 8212 proteins in 2586 species: Archae - 0; Bacteria - 5604; Metazoa - 204; Fungi - 144; Plants - 365; Viruses - 2; Other Eukaryotes - 1894 (source: NCBI BLink). & (gnl|cdd|36959 : 134.0) no description available & (gnl|cdd|80807 : 84.1) no description available & (reliability: 362.0) & (original description: Putative acp, Description = Acyl carrier protein, PFAM = PF00550)' T '11.1.12' 'lipid metabolism.FA synthesis and FA elongation.ACP protein' 'niben044scf00048410ctg001_544-5820' '(at1g65290 : 100.0) Encodes a member of the mitochondrial acyl carrier protein (ACP) family. As part of the mitochondrial matrix, it is likely to be involved in fatty acid or lipoic acid biogenesis.; mitochondrial acyl carrier protein 2 (mtACP2); FUNCTIONS IN: acyl carrier activity, cobalt ion binding, metal ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein (ACP) (InterPro:IPR003231), Acyl carrier protein-like (InterPro:IPR009081), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: mitochondrial acyl carrier protein 1 (TAIR:AT2G44620.1); Has 8213 Blast hits to 8212 proteins in 2586 species: Archae - 0; Bacteria - 5604; Metazoa - 204; Fungi - 144; Plants - 365; Viruses - 2; Other Eukaryotes - 1894 (source: NCBI BLink). & (gnl|cdd|36959 : 98.4) no description available & (reliability: 200.0) & (original description: Putative acp, Description = Acyl carrier protein, PFAM = PF00550)' T '11.1.12' 'lipid metabolism.FA synthesis and FA elongation.ACP protein' 'niben101scf03855_36528-40907' '(p08817|acp2_horvu : 121.0) Acyl carrier protein 2, chloroplast precursor (Acyl carrier protein II) (ACP II) - Hordeum vulgare (Barley) & (at5g27200 : 106.0) encodes an acyl carrier protein; acyl carrier protein 5 (ACP5); FUNCTIONS IN: acyl carrier activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein (ACP) (InterPro:IPR003231), Acyl carrier protein-like (InterPro:IPR009081), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: acyl carrier protein 1 (TAIR:AT3G05020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36959 : 105.0) no description available & (reliability: 212.0) & (original description: Putative ACP1, Description = Acyl carrier protein 1, chloroplastic, PFAM = PF00550)' T '11.1.12' 'lipid metabolism.FA synthesis and FA elongation.ACP protein' 'niben101scf04146_284665-290078' '(p08817|acp2_horvu : 120.0) Acyl carrier protein 2, chloroplast precursor (Acyl carrier protein II) (ACP II) - Hordeum vulgare (Barley) & (at5g27200 : 104.0) encodes an acyl carrier protein; acyl carrier protein 5 (ACP5); FUNCTIONS IN: acyl carrier activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein (ACP) (InterPro:IPR003231), Acyl carrier protein-like (InterPro:IPR009081), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: acyl carrier protein 1 (TAIR:AT3G05020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36959 : 104.0) no description available & (reliability: 208.0) & (original description: Putative ACP3, Description = Acyl carrier protein 3, chloroplastic, PFAM = PF00550)' T '11.1.12' 'lipid metabolism.FA synthesis and FA elongation.ACP protein' 'niben101scf04375_519011-536439' '(at1g65290 : 174.0) Encodes a member of the mitochondrial acyl carrier protein (ACP) family. As part of the mitochondrial matrix, it is likely to be involved in fatty acid or lipoic acid biogenesis.; mitochondrial acyl carrier protein 2 (mtACP2); FUNCTIONS IN: acyl carrier activity, cobalt ion binding, metal ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein (ACP) (InterPro:IPR003231), Acyl carrier protein-like (InterPro:IPR009081), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: mitochondrial acyl carrier protein 1 (TAIR:AT2G44620.1); Has 8213 Blast hits to 8212 proteins in 2586 species: Archae - 0; Bacteria - 5604; Metazoa - 204; Fungi - 144; Plants - 365; Viruses - 2; Other Eukaryotes - 1894 (source: NCBI BLink). & (gnl|cdd|36959 : 129.0) no description available & (reliability: 348.0) & (original description: Putative acp, Description = Acyl carrier protein, PFAM = PF00550)' T '11.1.12' 'lipid metabolism.FA synthesis and FA elongation.ACP protein' 'niben101scf05912_259823-263940' '(p07854|acp1_spiol : 102.0) Acyl carrier protein 1, chloroplast precursor (Acyl carrier protein I) (ACP I) - Spinacia oleracea (Spinach) & (gnl|cdd|36959 : 99.0) no description available & (at5g27200 : 89.0) encodes an acyl carrier protein; acyl carrier protein 5 (ACP5); FUNCTIONS IN: acyl carrier activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein (ACP) (InterPro:IPR003231), Acyl carrier protein-like (InterPro:IPR009081), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: acyl carrier protein 1 (TAIR:AT3G05020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative acpP, Description = Acyl carrier protein, PFAM = PF00550)' T '11.1.12' 'lipid metabolism.FA synthesis and FA elongation.ACP protein' 'niben101scf06441_50970-56781' '(at1g65290 : 99.8) Encodes a member of the mitochondrial acyl carrier protein (ACP) family. As part of the mitochondrial matrix, it is likely to be involved in fatty acid or lipoic acid biogenesis.; mitochondrial acyl carrier protein 2 (mtACP2); FUNCTIONS IN: acyl carrier activity, cobalt ion binding, metal ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein (ACP) (InterPro:IPR003231), Acyl carrier protein-like (InterPro:IPR009081), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: mitochondrial acyl carrier protein 1 (TAIR:AT2G44620.1); Has 8213 Blast hits to 8212 proteins in 2586 species: Archae - 0; Bacteria - 5604; Metazoa - 204; Fungi - 144; Plants - 365; Viruses - 2; Other Eukaryotes - 1894 (source: NCBI BLink). & (gnl|cdd|36959 : 98.0) no description available & (reliability: 199.6) & (original description: Putative acp, Description = Acyl carrier protein, PFAM = PF00550)' T '11.1.12' 'lipid metabolism.FA synthesis and FA elongation.ACP protein' 'niben101scf07639_594760-599573' '(at2g44620 : 160.0) Encodes a member of the mitochondrial acyl carrier protein (ACP) family. As part of the mitochondrial matrix, it is likely to be involved in fatty acid or lipoic acid biogenesis. Its acylated form is predominantly present in the mitochondrial membrane while the non-acylated form is soluble.; mitochondrial acyl carrier protein 1 (MTACP-1); FUNCTIONS IN: phosphopantetheine binding, acyl carrier activity, cofactor binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein (ACP) (InterPro:IPR003231), Acyl carrier protein-like (InterPro:IPR009081), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: mitochondrial acyl carrier protein 2 (TAIR:AT1G65290.1); Has 7851 Blast hits to 7848 proteins in 2525 species: Archae - 0; Bacteria - 5315; Metazoa - 204; Fungi - 139; Plants - 352; Viruses - 2; Other Eukaryotes - 1839 (source: NCBI BLink). & (gnl|cdd|36959 : 113.0) no description available & (reliability: 320.0) & (original description: Putative MTACP1, Description = Acyl carrier protein 1, mitochondrial, PFAM = PF00550)' T '11.1.12' 'lipid metabolism.FA synthesis and FA elongation.ACP protein' 'niben101scf10834_250585-262166' '(at1g65290 : 181.0) Encodes a member of the mitochondrial acyl carrier protein (ACP) family. As part of the mitochondrial matrix, it is likely to be involved in fatty acid or lipoic acid biogenesis.; mitochondrial acyl carrier protein 2 (mtACP2); FUNCTIONS IN: acyl carrier activity, cobalt ion binding, metal ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein (ACP) (InterPro:IPR003231), Acyl carrier protein-like (InterPro:IPR009081), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: mitochondrial acyl carrier protein 1 (TAIR:AT2G44620.1); Has 8213 Blast hits to 8212 proteins in 2586 species: Archae - 0; Bacteria - 5604; Metazoa - 204; Fungi - 144; Plants - 365; Viruses - 2; Other Eukaryotes - 1894 (source: NCBI BLink). & (gnl|cdd|36959 : 135.0) no description available & (gnl|cdd|80807 : 84.5) no description available & (reliability: 362.0) & (original description: Putative acp, Description = Acyl carrier protein, PFAM = PF00550)' T '11.1.12' 'lipid metabolism.FA synthesis and FA elongation.ACP protein' 'niben101scf17787_7262-9803' '(at5g47630 : 115.0) Encodes a member of the mitochondrial acyl carrier protein (ACP) family. Its role is currently obscure as it is weakly expressed and has not yet been identified by mitochondrial proteome analysis.; mitochondrial acyl carrier protein 3 (mtACP3); FUNCTIONS IN: acyl carrier activity, cofactor binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein (ACP) (InterPro:IPR003231), Acyl carrier protein-like (InterPro:IPR009081); BEST Arabidopsis thaliana protein match is: mitochondrial acyl carrier protein 1 (TAIR:AT2G44620.1); Has 7384 Blast hits to 7383 proteins in 2545 species: Archae - 0; Bacteria - 5039; Metazoa - 204; Fungi - 139; Plants - 211; Viruses - 2; Other Eukaryotes - 1789 (source: NCBI BLink). & (gnl|cdd|36959 : 103.0) no description available & (reliability: 230.0) & (original description: Putative MTACP2, Description = Acyl carrier protein 3, mitochondrial, PFAM = PF00550)' T '11.1.13' 'lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein' 'nbv0.3scaffold10137_4499-8225' '(at4g24230 : 119.0) acyl-CoA-binding protein ACBP3. Localized extracellularly in transiently expressed tobacco BY-2 cells and onion epidermal cells. Binds arachidonyl-CoA with high affinity.; acyl-CoA-binding domain 3 (ACBP3); FUNCTIONS IN: acyl-CoA binding; INVOLVED IN: fatty acid transport; LOCATED IN: extracellular region; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Acyl-CoA-binding protein, ACBP (InterPro:IPR000582), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 2 (TAIR:AT4G27780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative ACBP, Description = Acyl-CoA-binding protein, PFAM = PF00887)' T '11.1.13' 'lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein' 'nbv0.3scaffold27628_14784-23694' '(at4g24230 : 117.0) acyl-CoA-binding protein ACBP3. Localized extracellularly in transiently expressed tobacco BY-2 cells and onion epidermal cells. Binds arachidonyl-CoA with high affinity.; acyl-CoA-binding domain 3 (ACBP3); FUNCTIONS IN: acyl-CoA binding; INVOLVED IN: fatty acid transport; LOCATED IN: extracellular region; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Acyl-CoA-binding protein, ACBP (InterPro:IPR000582), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 2 (TAIR:AT4G27780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative ACBP, Description = Acyl-CoA-binding protein, PFAM = PF00887)' T '11.1.13' 'lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein' 'nbv0.5scaffold2203_335926-349153' '(at3g05420 : 841.0) Acyl-CoA binding protein with high affinity for oleoyl-CoA. Expressed in all plant organs. Involved in fatty acid transport.; acyl-CoA binding protein 4 (ACBP4); FUNCTIONS IN: acyl-CoA binding; INVOLVED IN: lipid transport; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 2 (InterPro:IPR011498), Acyl-CoA-binding protein, ACBP (InterPro:IPR000582), Kelch-type beta propeller (InterPro:IPR015915), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 5 (TAIR:AT5G27630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35600 : 275.0) no description available & (q39610|dyha_chlre : 80.1) Dynein alpha chain, flagellar outer arm (DHC alpha) - Chlamydomonas reinhardtii & (reliability: 1682.0) & (original description: Putative ACBP4, Description = Acyl-CoA-binding domain-containing protein 4, PFAM = PF01344;PF13415;PF00887;PF13418)' T '11.1.13' 'lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein' 'niben101scf00369_161423-175868' '(at3g05420 : 814.0) Acyl-CoA binding protein with high affinity for oleoyl-CoA. Expressed in all plant organs. Involved in fatty acid transport.; acyl-CoA binding protein 4 (ACBP4); FUNCTIONS IN: acyl-CoA binding; INVOLVED IN: lipid transport; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 2 (InterPro:IPR011498), Acyl-CoA-binding protein, ACBP (InterPro:IPR000582), Kelch-type beta propeller (InterPro:IPR015915), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 5 (TAIR:AT5G27630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35600 : 280.0) no description available & (q39610|dyha_chlre : 87.0) Dynein alpha chain, flagellar outer arm (DHC alpha) - Chlamydomonas reinhardtii & (reliability: 1628.0) & (original description: Putative ACBP4, Description = Acyl-CoA-binding domain-containing protein 4, PFAM = PF00887;PF01344;PF13418;PF13415)' T '11.1.13' 'lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein' 'niben101scf04083_421510-427925' '(at5g53470 : 384.0) Encodes an acyl-CoA binding protein that is localized to vesicles,and plasma membrane especially in epidermal cells of heart, torpedo and cotyledon stage embryos, cell wall of the seed coat. Northern blot analysis showed that the 1.4 kb ACBP1 mRNA was expressed in silique, root, stem, leaf and flower.; acyl-CoA binding protein 1 (ACBP1); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Acyl-CoA-binding protein, ACBP (InterPro:IPR000582), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 2 (TAIR:AT4G27780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36035 : 120.0) no description available & (gnl|cdd|29261 : 108.0) no description available & (reliability: 768.0) & (original description: Putative ACBP1, Description = Acyl-CoA-binding domain-containing protein 1, PFAM = PF13637;PF00887)' T '11.1.13' 'lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein' 'niben101scf08843_284353-290023' '(at4g24230 : 120.0) acyl-CoA-binding protein ACBP3. Localized extracellularly in transiently expressed tobacco BY-2 cells and onion epidermal cells. Binds arachidonyl-CoA with high affinity.; acyl-CoA-binding domain 3 (ACBP3); FUNCTIONS IN: acyl-CoA binding; INVOLVED IN: fatty acid transport; LOCATED IN: extracellular region; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Acyl-CoA-binding protein, ACBP (InterPro:IPR000582), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 2 (TAIR:AT4G27780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative ACBP, Description = Acyl-CoA-binding domain-containing protein 3, PFAM = PF00887)' T '11.1.13' 'lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein' 'niben101scf19261_114064-118115' '(at4g24230 : 106.0) acyl-CoA-binding protein ACBP3. Localized extracellularly in transiently expressed tobacco BY-2 cells and onion epidermal cells. Binds arachidonyl-CoA with high affinity.; acyl-CoA-binding domain 3 (ACBP3); FUNCTIONS IN: acyl-CoA binding; INVOLVED IN: fatty acid transport; LOCATED IN: extracellular region; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Acyl-CoA-binding protein, ACBP (InterPro:IPR000582), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 2 (TAIR:AT4G27780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative ACBP, Description = Acyl-CoA-binding domain-containing protein 3, PFAM = PF00887)' T '11.1.13' 'lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein' 'niben101scf32453_36898-41059' '(o04066|acbp_ricco : 138.0) Acyl-CoA-binding protein (ACBP) - Ricinus communis (Castor bean) & (at1g31812 : 119.0) Acyl-CoA-binding protein. Bind acyl-CoA esters and protect acyl-CoAs from degradation by microsomal acyl-hydrolases.; acyl-CoA-binding protein 6 (ACBP6); FUNCTIONS IN: phosphatidylcholine binding, acyl-CoA binding; INVOLVED IN: response to freezing, response to cold, lipid transport; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA-binding protein, ACBP (InterPro:IPR000582), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 1 (TAIR:AT5G53470.1); Has 1828 Blast hits to 1828 proteins in 405 species: Archae - 0; Bacteria - 293; Metazoa - 888; Fungi - 180; Plants - 233; Viruses - 0; Other Eukaryotes - 234 (source: NCBI BLink). & (gnl|cdd|64738 : 112.0) no description available & (gnl|cdd|36035 : 92.0) no description available & (reliability: 238.0) & (original description: Putative acbp3, Description = Acyl-CoA-binding protein, PFAM = PF00887)' T '11.1.15' 'lipid metabolism.FA synthesis and FA elongation.ACP desaturase' 'nbv0.5scaffold364_628247-738730' '(gnl|cdd|67043 : 293.0) no description available & (at1g43800 : 292.0) Plant stearoyl-acyl-carrier-protein desaturase family protein; FUNCTIONS IN: acyl-[acyl-carrier-protein] desaturase activity, oxidoreductase activity, transition metal ion binding; INVOLVED IN: oxidation reduction, fatty acid metabolic process, fatty acid biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Fatty acid desaturase, type 2 (InterPro:IPR005067), Stearoyl-ACP desaturase, conserved site (InterPro:IPR005803); BEST Arabidopsis thaliana protein match is: Plant stearoyl-acyl-carrier-protein desaturase family protein (TAIR:AT2G43710.1); Has 962 Blast hits to 955 proteins in 224 species: Archae - 0; Bacteria - 456; Metazoa - 2; Fungi - 0; Plants - 446; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (p22337|stad_ricco : 257.0) Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) (Delta(9) stearoyl-acyl carrier protein desaturase) - Ricinus communis (Castor bean) & (reliability: 584.0) & (original description: Putative fab2, Description = Acyl-[acyl-carrier-protein] desaturase, PFAM = PF03405)' T '11.1.15' 'lipid metabolism.FA synthesis and FA elongation.ACP desaturase' 'niben044scf00036794ctg000_1-5408' '(p46253|stad_soltu : 685.0) Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) - Solanum tuberosum (Potato) & (gnl|cdd|67043 : 625.0) no description available & (at2g43710 : 615.0) Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling. ssi2 mutants resulted in hyper-resistance to green peach aphid and antibiosis activity in petiole exudates.; SSI2; FUNCTIONS IN: acyl-[acyl-carrier-protein] desaturase activity, stearoyl-CoA 9-desaturase activity; INVOLVED IN: in 10 processes; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Fatty acid desaturase, type 2 (InterPro:IPR005067), Stearoyl-ACP desaturase, conserved site (InterPro:IPR005803); BEST Arabidopsis thaliana protein match is: Plant stearoyl-acyl-carrier-protein desaturase family protein (TAIR:AT3G02630.1); Has 946 Blast hits to 938 proteins in 221 species: Archae - 0; Bacteria - 436; Metazoa - 2; Fungi - 0; Plants - 450; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 1230.0) & (original description: Putative fab2, Description = Acyl-[acyl-carrier-protein] desaturase, PFAM = PF03405)' T '11.1.15' 'lipid metabolism.FA synthesis and FA elongation.ACP desaturase' 'niben101scf00505_422344-424684' '(gnl|cdd|67043 : 135.0) no description available & (p46253|stad_soltu : 110.0) Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) - Solanum tuberosum (Potato) & (at1g43800 : 104.0) Plant stearoyl-acyl-carrier-protein desaturase family protein; FUNCTIONS IN: acyl-[acyl-carrier-protein] desaturase activity, oxidoreductase activity, transition metal ion binding; INVOLVED IN: oxidation reduction, fatty acid metabolic process, fatty acid biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Fatty acid desaturase, type 2 (InterPro:IPR005067), Stearoyl-ACP desaturase, conserved site (InterPro:IPR005803); BEST Arabidopsis thaliana protein match is: Plant stearoyl-acyl-carrier-protein desaturase family protein (TAIR:AT2G43710.1); Has 962 Blast hits to 955 proteins in 224 species: Archae - 0; Bacteria - 456; Metazoa - 2; Fungi - 0; Plants - 446; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative fab2, Description = Acyl-[acyl-carrier-protein] desaturase, PFAM = PF03405)' T '11.1.15' 'lipid metabolism.FA synthesis and FA elongation.ACP desaturase' 'niben101scf00809_132681-138884' '(p22337|stad_ricco : 728.0) Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) (Delta(9) stearoyl-acyl carrier protein desaturase) - Ricinus communis (Castor bean) & (at2g43710 : 678.0) Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling. ssi2 mutants resulted in hyper-resistance to green peach aphid and antibiosis activity in petiole exudates.; SSI2; FUNCTIONS IN: acyl-[acyl-carrier-protein] desaturase activity, stearoyl-CoA 9-desaturase activity; INVOLVED IN: in 10 processes; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Fatty acid desaturase, type 2 (InterPro:IPR005067), Stearoyl-ACP desaturase, conserved site (InterPro:IPR005803); BEST Arabidopsis thaliana protein match is: Plant stearoyl-acyl-carrier-protein desaturase family protein (TAIR:AT3G02630.1); Has 946 Blast hits to 938 proteins in 221 species: Archae - 0; Bacteria - 436; Metazoa - 2; Fungi - 0; Plants - 450; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|67043 : 631.0) no description available & (reliability: 1356.0) & (original description: Putative fab2, Description = Acyl-[acyl-carrier-protein] desaturase, PFAM = PF03405)' T '11.1.15' 'lipid metabolism.FA synthesis and FA elongation.ACP desaturase' 'niben101scf00863_1032008-1037430' '(p46253|stad_soltu : 703.0) Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) - Solanum tuberosum (Potato) & (at2g43710 : 631.0) Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling. ssi2 mutants resulted in hyper-resistance to green peach aphid and antibiosis activity in petiole exudates.; SSI2; FUNCTIONS IN: acyl-[acyl-carrier-protein] desaturase activity, stearoyl-CoA 9-desaturase activity; INVOLVED IN: in 10 processes; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Fatty acid desaturase, type 2 (InterPro:IPR005067), Stearoyl-ACP desaturase, conserved site (InterPro:IPR005803); BEST Arabidopsis thaliana protein match is: Plant stearoyl-acyl-carrier-protein desaturase family protein (TAIR:AT3G02630.1); Has 946 Blast hits to 938 proteins in 221 species: Archae - 0; Bacteria - 436; Metazoa - 2; Fungi - 0; Plants - 450; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|67043 : 620.0) no description available & (reliability: 1262.0) & (original description: Putative fab2, Description = Acyl-[acyl-carrier-protein] desaturase, PFAM = PF03405)' T '11.1.15' 'lipid metabolism.FA synthesis and FA elongation.ACP desaturase' 'niben101scf26075_3565-7939' '(gnl|cdd|67043 : 525.0) no description available & (at1g43800 : 513.0) Plant stearoyl-acyl-carrier-protein desaturase family protein; FUNCTIONS IN: acyl-[acyl-carrier-protein] desaturase activity, oxidoreductase activity, transition metal ion binding; INVOLVED IN: oxidation reduction, fatty acid metabolic process, fatty acid biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Fatty acid desaturase, type 2 (InterPro:IPR005067), Stearoyl-ACP desaturase, conserved site (InterPro:IPR005803); BEST Arabidopsis thaliana protein match is: Plant stearoyl-acyl-carrier-protein desaturase family protein (TAIR:AT2G43710.1); Has 962 Blast hits to 955 proteins in 224 species: Archae - 0; Bacteria - 456; Metazoa - 2; Fungi - 0; Plants - 446; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (p46253|stad_soltu : 471.0) Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) - Solanum tuberosum (Potato) & (reliability: 1026.0) & (original description: Putative fab2, Description = Acyl-[acyl-carrier-protein] desaturase, PFAM = PF03405)' T '11.1.20' 'lipid metabolism.FA synthesis and FA elongation.MCD' 'niben044scf00011308ctg002_1158-6456' '(at4g04320 : 243.0) malonyl-CoA decarboxylase family protein; FUNCTIONS IN: malonyl-CoA decarboxylase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Malonyl-CoA decarboxylase (InterPro:IPR007956); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38228 : 221.0) no description available & (gnl|cdd|68849 : 203.0) no description available & (reliability: 486.0) & (original description: Putative Mlycd, Description = Mlycd protein, PFAM = PF05292)' T '11.1.20' 'lipid metabolism.FA synthesis and FA elongation.MCD' 'niben101scf09590_32436-44116' '(at4g04320 : 627.0) malonyl-CoA decarboxylase family protein; FUNCTIONS IN: malonyl-CoA decarboxylase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Malonyl-CoA decarboxylase (InterPro:IPR007956); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38228 : 355.0) no description available & (gnl|cdd|68849 : 337.0) no description available & (reliability: 1254.0) & (original description: Putative matA, Description = Malonyl-CoA decarboxylase, PFAM = PF05292;PF17408)' T '11.1.30' 'lipid metabolism.FA synthesis and FA elongation.pyruvate kinase' 'niben101scf00276_790989-803005' '(q40546|kpyg_tobac : 998.0) Pyruvate kinase isozyme G, chloroplast precursor (EC 2.7.1.40) - Nicotiana tabacum (Common tobacco) & (at1g32440 : 758.0) encodes a chloroplast pyruvate kinase beta subunit. The enzyme is less active than the other chloroplast pyruvate kinase beta subunit encoded by AT5G52920. Involved in seed oil biosynthesis. Can partially complement the AT5G52920 mutant.; plastidial pyruvate kinase 3 (PKp3); FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: glycolysis, fatty acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidic pyruvate kinase beta subunit 1 (TAIR:AT5G52920.1); Has 10210 Blast hits to 10148 proteins in 2685 species: Archae - 173; Bacteria - 5966; Metazoa - 531; Fungi - 219; Plants - 532; Viruses - 0; Other Eukaryotes - 2789 (source: NCBI BLink). & (gnl|cdd|37534 : 506.0) no description available & (gnl|cdd|30817 : 464.0) no description available & (reliability: 1516.0) & (original description: Putative pk, Description = Pyruvate kinase, PFAM = PF00224;PF02887)' T '11.1.30' 'lipid metabolism.FA synthesis and FA elongation.pyruvate kinase' 'niben101scf06684_344827-354906' '(at5g52920 : 950.0) encodes a dominant chloroplast pyruvate kinase beta subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds. The mutant plant has wrinkled seeds, with a 50-70% reduction in seed fatty acid content.; plastidic pyruvate kinase beta subunit 1 (PKP-BETA1); FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: response to cadmium ion, glycolysis, seed development, fatty acid biosynthetic process, lipid metabolic process; LOCATED IN: mitochondrion, chloroplast, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidial pyruvate kinase 3 (TAIR:AT1G32440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q40546|kpyg_tobac : 746.0) Pyruvate kinase isozyme G, chloroplast precursor (EC 2.7.1.40) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|37534 : 534.0) no description available & (gnl|cdd|81761 : 477.0) no description available & (reliability: 1900.0) & (original description: Putative PKP2, Description = Plastidial pyruvate kinase 2, PFAM = PF02887;PF00224)' T '11.1.31' 'lipid metabolism.FA synthesis and FA elongation.pyruvate DH' 'nbv0.3scaffold322_129476-137593' '(at2g34590 : 648.0) Transketolase family protein; FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, zinc ion binding, transketolase activity; INVOLVED IN: pollen tube development; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 14271 Blast hits to 14261 proteins in 2406 species: Archae - 196; Bacteria - 9106; Metazoa - 476; Fungi - 223; Plants - 259; Viruses - 0; Other Eukaryotes - 4011 (source: NCBI BLink). & (gnl|cdd|79356 : 593.0) no description available & (gnl|cdd|35744 : 514.0) no description available & (q9mur4|odpb_mesvi : 421.0) Pyruvate dehydrogenase E1 component subunit beta (EC 1.2.4.1) - Mesostigma viride & (reliability: 1296.0) & (original description: Putative pdhB, Description = Pyruvate dehydrogenase E1 component beta subunit, PFAM = PF02779;PF02780)' T '11.1.31' 'lipid metabolism.FA synthesis and FA elongation.pyruvate DH' 'nbv0.5scaffold2050_64698-78135' '(at3g25860 : 521.0) Nuclear encoded dihydrolipoamide S-acetyltransferase (LTA2) that encodes teh Pyruvate Decarboxylase E2 subunit. Mutant has embryo defect.; LTA2; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity; INVOLVED IN: metabolic process, acetyl-CoA biosynthetic process from pyruvate; LOCATED IN: cytosolic ribosome, chloroplast stroma, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: 2-oxoacid dehydrogenases acyltransferase family protein (TAIR:AT1G34430.1); Has 23844 Blast hits to 20819 proteins in 2344 species: Archae - 101; Bacteria - 13163; Metazoa - 1146; Fungi - 799; Plants - 467; Viruses - 32; Other Eukaryotes - 8136 (source: NCBI BLink). & (gnl|cdd|35777 : 402.0) no description available & (gnl|cdd|84002 : 351.0) no description available & (reliability: 1042.0) & (original description: Putative aceF, Description = Branched-chain alpha-keto acid dehydrogenase subunit E2, PFAM = PF00364;PF02817;PF00198)' T '11.1.31' 'lipid metabolism.FA synthesis and FA elongation.pyruvate DH' 'niben044scf00026414ctg006_2935-6231' '(at3g25860 : 463.0) Nuclear encoded dihydrolipoamide S-acetyltransferase (LTA2) that encodes teh Pyruvate Decarboxylase E2 subunit. Mutant has embryo defect.; LTA2; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity; INVOLVED IN: metabolic process, acetyl-CoA biosynthetic process from pyruvate; LOCATED IN: cytosolic ribosome, chloroplast stroma, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: 2-oxoacid dehydrogenases acyltransferase family protein (TAIR:AT1G34430.1); Has 23844 Blast hits to 20819 proteins in 2344 species: Archae - 101; Bacteria - 13163; Metazoa - 1146; Fungi - 799; Plants - 467; Viruses - 32; Other Eukaryotes - 8136 (source: NCBI BLink). & (gnl|cdd|35777 : 360.0) no description available & (gnl|cdd|84002 : 317.0) no description available & (reliability: 926.0) & (original description: Putative LTA2, Description = Dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic, PFAM = PF02817;PF00198;PF00364)' T '11.1.31' 'lipid metabolism.FA synthesis and FA elongation.pyruvate DH' 'niben044scf00055337ctg002_1-8010' '(at4g16155 : 885.0) dihydrolipoyl dehydrogenases; FUNCTIONS IN: dihydrolipoyl dehydrogenase activity; INVOLVED IN: oxidation reduction, cell redox homeostasis; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 1 (TAIR:AT3G16950.1); Has 29334 Blast hits to 29301 proteins in 3032 species: Archae - 559; Bacteria - 20043; Metazoa - 811; Fungi - 377; Plants - 519; Viruses - 0; Other Eukaryotes - 7025 (source: NCBI BLink). & (gnl|cdd|36549 : 561.0) no description available & (gnl|cdd|81943 : 544.0) no description available & (p31023|dldh_pea : 237.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (reliability: 1770.0) & (original description: Putative LPD2, Description = Dihydrolipoyl dehydrogenase 2, chloroplastic, PFAM = PF07992;PF02852)' T '11.1.31' 'lipid metabolism.FA synthesis and FA elongation.pyruvate DH' 'niben101scf00332_548090-558842' '(at4g16155 : 885.0) dihydrolipoyl dehydrogenases; FUNCTIONS IN: dihydrolipoyl dehydrogenase activity; INVOLVED IN: oxidation reduction, cell redox homeostasis; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 1 (TAIR:AT3G16950.1); Has 29334 Blast hits to 29301 proteins in 3032 species: Archae - 559; Bacteria - 20043; Metazoa - 811; Fungi - 377; Plants - 519; Viruses - 0; Other Eukaryotes - 7025 (source: NCBI BLink). & (gnl|cdd|36549 : 566.0) no description available & (gnl|cdd|81943 : 548.0) no description available & (p31023|dldh_pea : 236.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (reliability: 1770.0) & (original description: Putative LPD2, Description = Dihydrolipoyl dehydrogenase 2, chloroplastic, PFAM = PF07992;PF02852)' T '11.1.31' 'lipid metabolism.FA synthesis and FA elongation.pyruvate DH' 'niben101scf00466_488120-497396' '(at3g16950 : 583.0) encodes a plastid lipoamide dehydrogenase, subunit of the pyruvate dehydrogenase complex which provides acetyl-CoA for de novo fatty acid biosynthesis. The gene is highly expressed in developing seeds.; lipoamide dehydrogenase 1 (LPD1); CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: dihydrolipoyl dehydrogenases (TAIR:AT4G16155.1); Has 30222 Blast hits to 30191 proteins in 3051 species: Archae - 599; Bacteria - 20783; Metazoa - 811; Fungi - 386; Plants - 503; Viruses - 0; Other Eukaryotes - 7140 (source: NCBI BLink). & (gnl|cdd|36549 : 370.0) no description available & (gnl|cdd|81943 : 363.0) no description available & (p31023|dldh_pea : 143.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (reliability: 1150.0) & (original description: Putative dld2, Description = Dihydrolipoyl dehydrogenase, PFAM = PF07992)' T '11.1.31' 'lipid metabolism.FA synthesis and FA elongation.pyruvate DH' 'niben101scf02517_1816765-1832955' '(at3g25860 : 519.0) Nuclear encoded dihydrolipoamide S-acetyltransferase (LTA2) that encodes teh Pyruvate Decarboxylase E2 subunit. Mutant has embryo defect.; LTA2; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity; INVOLVED IN: metabolic process, acetyl-CoA biosynthetic process from pyruvate; LOCATED IN: cytosolic ribosome, chloroplast stroma, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: 2-oxoacid dehydrogenases acyltransferase family protein (TAIR:AT1G34430.1); Has 23844 Blast hits to 20819 proteins in 2344 species: Archae - 101; Bacteria - 13163; Metazoa - 1146; Fungi - 799; Plants - 467; Viruses - 32; Other Eukaryotes - 8136 (source: NCBI BLink). & (gnl|cdd|35777 : 395.0) no description available & (gnl|cdd|84002 : 359.0) no description available & (reliability: 1038.0) & (original description: Putative LTA2, Description = Dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic, PFAM = PF00364;PF02817;PF00198)' T '11.1.31' 'lipid metabolism.FA synthesis and FA elongation.pyruvate DH' 'niben101scf04473_319942-329009' '(at4g16155 : 862.0) dihydrolipoyl dehydrogenases; FUNCTIONS IN: dihydrolipoyl dehydrogenase activity; INVOLVED IN: oxidation reduction, cell redox homeostasis; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 1 (TAIR:AT3G16950.1); Has 29334 Blast hits to 29301 proteins in 3032 species: Archae - 559; Bacteria - 20043; Metazoa - 811; Fungi - 377; Plants - 519; Viruses - 0; Other Eukaryotes - 7025 (source: NCBI BLink). & (gnl|cdd|36549 : 551.0) no description available & (gnl|cdd|81943 : 537.0) no description available & (p31023|dldh_pea : 237.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (reliability: 1724.0) & (original description: Putative lpdA, Description = Dihydrolipoyl dehydrogenase, PFAM = PF07992;PF02852)' T '11.1.31' 'lipid metabolism.FA synthesis and FA elongation.pyruvate DH' 'niben101scf07691_2396-11872' '(at4g16155 : 840.0) dihydrolipoyl dehydrogenases; FUNCTIONS IN: dihydrolipoyl dehydrogenase activity; INVOLVED IN: oxidation reduction, cell redox homeostasis; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 1 (TAIR:AT3G16950.1); Has 29334 Blast hits to 29301 proteins in 3032 species: Archae - 559; Bacteria - 20043; Metazoa - 811; Fungi - 377; Plants - 519; Viruses - 0; Other Eukaryotes - 7025 (source: NCBI BLink). & (gnl|cdd|36549 : 558.0) no description available & (gnl|cdd|81943 : 541.0) no description available & (p31023|dldh_pea : 234.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (reliability: 1680.0) & (original description: Putative lpd2, Description = Lipoamide dehydrogenase, PFAM = PF07992;PF02852)' T '11.1.31' 'lipid metabolism.FA synthesis and FA elongation.pyruvate DH' 'niben101scf10390_43569-56591' '(at1g30120 : 629.0) Encodes a putative plastid pyruvate dehydrogenase E1 beta subunit that is distinct from the mitochondrial pyruvate dehydrogenase E1 beta subunit.; pyruvate dehydrogenase E1 beta (PDH-E1 BETA); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: plastid pyruvate dehydrogenase complex, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: Transketolase family protein (TAIR:AT2G34590.1); Has 14229 Blast hits to 14219 proteins in 2378 species: Archae - 200; Bacteria - 8952; Metazoa - 481; Fungi - 222; Plants - 270; Viruses - 0; Other Eukaryotes - 4104 (source: NCBI BLink). & (gnl|cdd|79356 : 595.0) no description available & (gnl|cdd|35744 : 518.0) no description available & (q9mur4|odpb_mesvi : 419.0) Pyruvate dehydrogenase E1 component subunit beta (EC 1.2.4.1) - Mesostigma viride & (reliability: 1254.0) & (original description: Putative acoB, Description = Pyruvate dehydrogenase E1 component subunit beta, PFAM = PF02780;PF02779)' T '11.1.31' 'lipid metabolism.FA synthesis and FA elongation.pyruvate DH' 'niben101scf14210_124631-132800' '(at2g34590 : 648.0) Transketolase family protein; FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, zinc ion binding, transketolase activity; INVOLVED IN: pollen tube development; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 14271 Blast hits to 14261 proteins in 2406 species: Archae - 196; Bacteria - 9106; Metazoa - 476; Fungi - 223; Plants - 259; Viruses - 0; Other Eukaryotes - 4011 (source: NCBI BLink). & (gnl|cdd|79356 : 593.0) no description available & (gnl|cdd|35744 : 515.0) no description available & (q9mur4|odpb_mesvi : 421.0) Pyruvate dehydrogenase E1 component subunit beta (EC 1.2.4.1) - Mesostigma viride & (reliability: 1296.0) & (original description: Putative pdhB, Description = Pyruvate dehydrogenase E1 component beta subunit, PFAM = PF02779;PF02780)' T '11.1.1001' 'lipid metabolism.FA synthesis and FA elongation' 'eicosanoate' '' M '11.1.1002' 'lipid metabolism.FA synthesis and FA elongation' 'nonanoate' '' M '11.1.1003' 'lipid metabolism.FA synthesis and FA elongation' 'tetradecanoic acid' '' M '11.2' 'lipid metabolism.FA desaturation' '' '' '11.2.1' 'lipid metabolism.FA desaturation.desaturase' 'niben044scf00008106ctg004_4226-7732' '(at3g15850 : 452.0) Chloroplastic enzyme responsible for the synthesis of 16:1 fatty acids from galactolipids and sulpholipids. Uses ferredoxin as electron donor.; fatty acid desaturase 5 (FAD5); CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1, core (InterPro:IPR015876), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: Fatty acid desaturase family protein (TAIR:AT3G15870.1); Has 3424 Blast hits to 3424 proteins in 822 species: Archae - 0; Bacteria - 1534; Metazoa - 801; Fungi - 236; Plants - 106; Viruses - 4; Other Eukaryotes - 743 (source: NCBI BLink). & (gnl|cdd|36813 : 358.0) no description available & (gnl|cdd|31588 : 240.0) no description available & (reliability: 904.0) & (original description: Putative ADS3, Description = Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic, PFAM = PF00487)' T '11.2.2' 'lipid metabolism.FA desaturation.a hydroxylase' 'nbv0.3scaffold32012_8144-14933' '(at2g34770 : 365.0) encodes a fatty acid hydroxylase, required for the AtBI-1-mediated suppression of programmed cell death.; fatty acid hydroxylase 1 (FAH1); FUNCTIONS IN: fatty acid alpha-hydroxylase activity, catalytic activity; INVOLVED IN: very long-chain fatty acid metabolic process, negative regulation of programmed cell death; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: fatty acid hydroxylase 2 (TAIR:AT4G20870.1); Has 784 Blast hits to 784 proteins in 354 species: Archae - 0; Bacteria - 388; Metazoa - 105; Fungi - 140; Plants - 78; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|35759 : 304.0) no description available & (reliability: 730.0) & (original description: Putative FAH1, Description = Dihydroceramide fatty acyl 2-hydroxylase FAH1, PFAM = PF04116)' T '11.2.2' 'lipid metabolism.FA desaturation.a hydroxylase' 'nbv0.5scaffold8188_31858-38665' '(at2g34770 : 366.0) encodes a fatty acid hydroxylase, required for the AtBI-1-mediated suppression of programmed cell death.; fatty acid hydroxylase 1 (FAH1); FUNCTIONS IN: fatty acid alpha-hydroxylase activity, catalytic activity; INVOLVED IN: very long-chain fatty acid metabolic process, negative regulation of programmed cell death; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: fatty acid hydroxylase 2 (TAIR:AT4G20870.1); Has 784 Blast hits to 784 proteins in 354 species: Archae - 0; Bacteria - 388; Metazoa - 105; Fungi - 140; Plants - 78; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|35759 : 305.0) no description available & (reliability: 732.0) & (original description: Putative fa2h, Description = Ceramide very long chain fatty acid hydroxylase, PFAM = PF04116)' T '11.2.2' 'lipid metabolism.FA desaturation.a hydroxylase' 'niben101scf06685_38975-43466' '(at2g34770 : 368.0) encodes a fatty acid hydroxylase, required for the AtBI-1-mediated suppression of programmed cell death.; fatty acid hydroxylase 1 (FAH1); FUNCTIONS IN: fatty acid alpha-hydroxylase activity, catalytic activity; INVOLVED IN: very long-chain fatty acid metabolic process, negative regulation of programmed cell death; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: fatty acid hydroxylase 2 (TAIR:AT4G20870.1); Has 784 Blast hits to 784 proteins in 354 species: Archae - 0; Bacteria - 388; Metazoa - 105; Fungi - 140; Plants - 78; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|35759 : 303.0) no description available & (reliability: 736.0) & (original description: Putative FAH1, Description = Dihydroceramide fatty acyl 2-hydroxylase FAH1, PFAM = PF04116)' T '11.2.2' 'lipid metabolism.FA desaturation.a hydroxylase' 'niben101scf32747_25687-30669' '(at2g34770 : 289.0) encodes a fatty acid hydroxylase, required for the AtBI-1-mediated suppression of programmed cell death.; fatty acid hydroxylase 1 (FAH1); FUNCTIONS IN: fatty acid alpha-hydroxylase activity, catalytic activity; INVOLVED IN: very long-chain fatty acid metabolic process, negative regulation of programmed cell death; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: fatty acid hydroxylase 2 (TAIR:AT4G20870.1); Has 784 Blast hits to 784 proteins in 354 species: Archae - 0; Bacteria - 388; Metazoa - 105; Fungi - 140; Plants - 78; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|35759 : 275.0) no description available & (reliability: 578.0) & (original description: Putative FAH1, Description = Dihydroceramide fatty acyl 2-hydroxylase FAH1, PFAM = PF04116)' T '11.2.3' 'lipid metabolism.FA desaturation.omega 3 desaturase' 'nbv0.5scaffold2743_25020-69963' '(p48619|fad3c_ricco : 605.0) Omega-3 fatty acid desaturase, chloroplast precursor (EC 1.14.19.-) - Ricinus communis (Castor bean) & (at5g05580 : 595.0) Encodes a temperature sensitive plastidic fatty acid desaturase.; fatty acid desaturase 8 (FAD8); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 7 (TAIR:AT3G11170.1). & (gnl|cdd|58173 : 212.0) no description available & (reliability: 1190.0) & (original description: Putative FAD7, Description = Chloroplast glycerolipid omega-3-fatty acid desaturase, PFAM = PF11960;PF00487)' T '11.2.3' 'lipid metabolism.FA desaturation.omega 3 desaturase' 'nbv0.5scaffold4227_22814-55545' '(p48626|fad3e_tobac : 610.0) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC 1.14.19.-) - Nicotiana tabacum (Common tobacco) & (at3g11170 : 553.0) Chloroplastic enzyme responsible for the synthesis of 16:3 and 18:3 fatty acids from galactolipids, sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene expression is induced by wounding in shoot and root. The wound-response in shoot is independent of jasmonic acid mediated pathway whereas the root response is mediated by jasmonic acid.; fatty acid desaturase 7 (FAD7); FUNCTIONS IN: omega-3 fatty acid desaturase activity; INVOLVED IN: response to cold, response to wounding, fatty acid biosynthetic process, jasmonic acid mediated signaling pathway; LOCATED IN: plastid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 8 (TAIR:AT5G05580.1); Has 2938 Blast hits to 2935 proteins in 698 species: Archae - 0; Bacteria - 1234; Metazoa - 17; Fungi - 265; Plants - 926; Viruses - 0; Other Eukaryotes - 496 (source: NCBI BLink). & (gnl|cdd|58173 : 212.0) no description available & (reliability: 1106.0) & (original description: Putative FAD3, Description = Omega-3 fatty acid desaturase, endoplasmic reticulum, PFAM = PF00487;PF11960)' T '11.2.3' 'lipid metabolism.FA desaturation.omega 3 desaturase' 'nbv0.5scaffold5323_109571-113684' '(p48619|fad3c_ricco : 663.0) Omega-3 fatty acid desaturase, chloroplast precursor (EC 1.14.19.-) - Ricinus communis (Castor bean) & (at5g05580 : 641.0) Encodes a temperature sensitive plastidic fatty acid desaturase.; fatty acid desaturase 8 (FAD8); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 7 (TAIR:AT3G11170.1). & (gnl|cdd|58173 : 228.0) no description available & (reliability: 1282.0) & (original description: Putative FAD7, Description = Omega-3 fatty acid desaturase, chloroplastic, PFAM = PF11960;PF00487)' T '11.2.3' 'lipid metabolism.FA desaturation.omega 3 desaturase' 'niben101scf00318_988225-992285' '(p48619|fad3c_ricco : 674.0) Omega-3 fatty acid desaturase, chloroplast precursor (EC 1.14.19.-) - Ricinus communis (Castor bean) & (at5g05580 : 644.0) Encodes a temperature sensitive plastidic fatty acid desaturase.; fatty acid desaturase 8 (FAD8); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 7 (TAIR:AT3G11170.1). & (gnl|cdd|58173 : 223.0) no description available & (reliability: 1288.0) & (original description: Putative FAD7, Description = Omega-3 fatty acid desaturase, chloroplastic, PFAM = PF11960;PF00487)' T '11.2.3' 'lipid metabolism.FA desaturation.omega 3 desaturase' 'niben101scf03414_141430-145636' '(p48626|fad3e_tobac : 745.0) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC 1.14.19.-) - Nicotiana tabacum (Common tobacco) & (at2g29980 : 538.0) Endoplasmic reticulum enzyme responsible for the synthesis of 18:3 fatty acids from phospholipids. Uses cytochrome b5 as electron donor.; fatty acid desaturase 3 (FAD3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 8 (TAIR:AT5G05580.1); Has 2074 Blast hits to 2074 proteins in 524 species: Archae - 0; Bacteria - 643; Metazoa - 17; Fungi - 254; Plants - 868; Viruses - 0; Other Eukaryotes - 292 (source: NCBI BLink). & (gnl|cdd|58173 : 212.0) no description available & (reliability: 1076.0) & (original description: Putative FAD3, Description = Omega-3 fatty acid desaturase, endoplasmic reticulum, PFAM = PF00487;PF11960)' T '11.2.3' 'lipid metabolism.FA desaturation.omega 3 desaturase' 'niben101scf11417_118948-123425' '(p48626|fad3e_tobac : 589.0) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC 1.14.19.-) - Nicotiana tabacum (Common tobacco) & (at3g11170 : 535.0) Chloroplastic enzyme responsible for the synthesis of 16:3 and 18:3 fatty acids from galactolipids, sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene expression is induced by wounding in shoot and root. The wound-response in shoot is independent of jasmonic acid mediated pathway whereas the root response is mediated by jasmonic acid.; fatty acid desaturase 7 (FAD7); FUNCTIONS IN: omega-3 fatty acid desaturase activity; INVOLVED IN: response to cold, response to wounding, fatty acid biosynthetic process, jasmonic acid mediated signaling pathway; LOCATED IN: plastid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 8 (TAIR:AT5G05580.1); Has 2938 Blast hits to 2935 proteins in 698 species: Archae - 0; Bacteria - 1234; Metazoa - 17; Fungi - 265; Plants - 926; Viruses - 0; Other Eukaryotes - 496 (source: NCBI BLink). & (gnl|cdd|58173 : 216.0) no description available & (reliability: 1070.0) & (original description: Putative desB, Description = Omega-3 fatty acid desaturase, PFAM = PF00487;PF11960)' T '11.2.4' 'lipid metabolism.FA desaturation.omega 6 desaturase' 'niben101scf00774_178194-188077' '(p48627|fad6c_brana : 659.0) Omega-6 fatty acid desaturase, chloroplast precursor (EC 1.14.19.-) - Brassica napus (Rape) & (at4g30950 : 652.0) Chloroplastic enzyme responsible for the synthesis of 16:2 and 18:2 fatty acids from galactolipids, sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene mutation resulted in reduced level of unsaturated fatty acids leading to susceptibility to photoinhibition.; fatty acid desaturase 6 (FAD6); FUNCTIONS IN: omega-6 fatty acid desaturase activity; INVOLVED IN: photoinhibition, fatty acid biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 8 (TAIR:AT5G05580.1); Has 3227 Blast hits to 3218 proteins in 733 species: Archae - 0; Bacteria - 1371; Metazoa - 67; Fungi - 380; Plants - 896; Viruses - 0; Other Eukaryotes - 513 (source: NCBI BLink). & (gnl|cdd|58173 : 215.0) no description available & (reliability: 1304.0) & (original description: Putative fad6, Description = Chloroplast omega-6 fatty acid desaturase, PFAM = PF00487)' T '11.2.4' 'lipid metabolism.FA desaturation.omega 6 desaturase' 'niben101scf02374_119817-122902' '(p48631|fd6e2_soybn : 493.0) Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 (EC 1.14.19.-) - Glycine max (Soybean) & (at3g12120 : 492.0) Major enzyme responsible for the synthesis of 18:2 fatty acids in the endoplasmic reticulum. Contains His-rich motifs, which contribute to the interaction with the electron donor cytochrome b5. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.; fatty acid desaturase 2 (FAD2); FUNCTIONS IN: omega-6 fatty acid desaturase activity, delta12-fatty acid dehydrogenase activity; INVOLVED IN: oxidation reduction, lipid metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 3 (TAIR:AT2G29980.1); Has 2431 Blast hits to 2431 proteins in 654 species: Archae - 0; Bacteria - 821; Metazoa - 31; Fungi - 266; Plants - 965; Viruses - 0; Other Eukaryotes - 348 (source: NCBI BLink). & (gnl|cdd|58173 : 179.0) no description available & (reliability: 984.0) & (original description: Putative FAD12, Description = Delta(12)-acyl-lipid-desaturase, PFAM = PF00487)' T '11.2.4' 'lipid metabolism.FA desaturation.omega 6 desaturase' 'niben101scf06661_76655-79806' '(at3g12120 : 632.0) Major enzyme responsible for the synthesis of 18:2 fatty acids in the endoplasmic reticulum. Contains His-rich motifs, which contribute to the interaction with the electron donor cytochrome b5. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.; fatty acid desaturase 2 (FAD2); FUNCTIONS IN: omega-6 fatty acid desaturase activity, delta12-fatty acid dehydrogenase activity; INVOLVED IN: oxidation reduction, lipid metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 3 (TAIR:AT2G29980.1); Has 2431 Blast hits to 2431 proteins in 654 species: Archae - 0; Bacteria - 821; Metazoa - 31; Fungi - 266; Plants - 965; Viruses - 0; Other Eukaryotes - 348 (source: NCBI BLink). & (p48631|fd6e2_soybn : 630.0) Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 (EC 1.14.19.-) - Glycine max (Soybean) & (gnl|cdd|58173 : 208.0) no description available & (reliability: 1264.0) & (original description: Putative fad2, Description = Fatty acid desaturase 2, PFAM = PF11960;PF00487)' T '11.2.4' 'lipid metabolism.FA desaturation.omega 6 desaturase' 'niben101scf09401_259630-262840' '(at3g12120 : 489.0) Major enzyme responsible for the synthesis of 18:2 fatty acids in the endoplasmic reticulum. Contains His-rich motifs, which contribute to the interaction with the electron donor cytochrome b5. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.; fatty acid desaturase 2 (FAD2); FUNCTIONS IN: omega-6 fatty acid desaturase activity, delta12-fatty acid dehydrogenase activity; INVOLVED IN: oxidation reduction, lipid metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 3 (TAIR:AT2G29980.1); Has 2431 Blast hits to 2431 proteins in 654 species: Archae - 0; Bacteria - 821; Metazoa - 31; Fungi - 266; Plants - 965; Viruses - 0; Other Eukaryotes - 348 (source: NCBI BLink). & (p48631|fd6e2_soybn : 488.0) Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 (EC 1.14.19.-) - Glycine max (Soybean) & (gnl|cdd|58173 : 174.0) no description available & (reliability: 978.0) & (original description: Putative fad2, Description = Delta-12 fatty acid desaturase, PFAM = PF11960;PF00487)' T '11.2.4' 'lipid metabolism.FA desaturation.omega 6 desaturase' 'niben101scf09417_176623-179771' '(p48631|fd6e2_soybn : 593.0) Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 (EC 1.14.19.-) - Glycine max (Soybean) & (at3g12120 : 590.0) Major enzyme responsible for the synthesis of 18:2 fatty acids in the endoplasmic reticulum. Contains His-rich motifs, which contribute to the interaction with the electron donor cytochrome b5. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.; fatty acid desaturase 2 (FAD2); FUNCTIONS IN: omega-6 fatty acid desaturase activity, delta12-fatty acid dehydrogenase activity; INVOLVED IN: oxidation reduction, lipid metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 3 (TAIR:AT2G29980.1); Has 2431 Blast hits to 2431 proteins in 654 species: Archae - 0; Bacteria - 821; Metazoa - 31; Fungi - 266; Plants - 965; Viruses - 0; Other Eukaryotes - 348 (source: NCBI BLink). & (gnl|cdd|58173 : 219.0) no description available & (reliability: 1180.0) & (original description: Putative FAD12, Description = Delta(12)-acyl-lipid-desaturase, PFAM = PF11960;PF00487)' T '11.2.1001' 'lipid metabolism.FA desaturation' '9,12-octadecadieneoic acid' '' M '11.3' 'lipid metabolism.Phospholipid synthesis' 'nbv0.3scaffold1369_58791-66156' '(q9m571|peamt_spiol : 830.0) Phosphoethanolamine N-methyltransferase (EC 2.1.1.103) - Spinacia oleracea (Spinach) & (at1g73600 : 822.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, phosphoethanolamine N-methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G18000.1); Has 22304 Blast hits to 21648 proteins in 2625 species: Archae - 587; Bacteria - 16224; Metazoa - 297; Fungi - 950; Plants - 536; Viruses - 5; Other Eukaryotes - 3705 (source: NCBI BLink). & (gnl|cdd|36483 : 286.0) no description available & (gnl|cdd|32411 : 100.0) no description available & (reliability: 1644.0) & (original description: Putative pmt, Description = Zgc:153034, PFAM = PF08241;PF13649)' T '11.3' 'lipid metabolism.Phospholipid synthesis' 'nbv0.3scaffold18126_9083-17076' '(at2g39290 : 242.0) Encodes a phosphatidylglycerolphosphate synthase 2C which is dual-targeted into chloroplasts and mitochondria. Mutant plants have mutant chloroplasts but normal mitochondria.; phosphatidylglycerolphosphate synthase 1 (PGP1); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phosphatidylinositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 2 (TAIR:AT3G55030.1); Has 7695 Blast hits to 7695 proteins in 2371 species: Archae - 0; Bacteria - 5013; Metazoa - 112; Fungi - 127; Plants - 109; Viruses - 0; Other Eukaryotes - 2334 (source: NCBI BLink). & (gnl|cdd|36830 : 156.0) no description available & (gnl|cdd|83521 : 135.0) no description available & (reliability: 484.0) & (original description: Putative PGPS2, Description = CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2, PFAM = PF01066)' T '11.3' 'lipid metabolism.Phospholipid synthesis' 'nbv0.3scaffold24443_10525-14585' '(at2g38110 : 546.0) Encodes a protein with glycerol-3-phosphate acyltransferase activity.; glycerol-3-phosphate acyltransferase 6 (GPAT6); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 8 (TAIR:AT4G00400.1); Has 444 Blast hits to 431 proteins in 52 species: Archae - 0; Bacteria - 47; Metazoa - 20; Fungi - 0; Plants - 368; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 1092.0) & (original description: Putative GPAT6, Description = Glycerol-3-phosphate 2-O-acyltransferase 6, PFAM = PF01553;PF12710)' T '11.3' 'lipid metabolism.Phospholipid synthesis' 'nbv0.5scaffold2824_29653-34545' '(at1g06520 : 601.0) Encodes a membrane associated mitochondrial localized protein with glycerol-3-phosphate acyltransferase activity.Expressed in flower buds and siliques. Homozygous mutant plants are male sterile and have abnormal glycerolipid levels.; glycerol-3-phosphate acyltransferase 1 (GPAT1); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 2 (TAIR:AT1G02390.1); Has 381 Blast hits to 368 proteins in 28 species: Archae - 0; Bacteria - 6; Metazoa - 8; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 1202.0) & (original description: Putative GPAT6, Description = Glycerol-3-phosphate 2-O-acyltransferase 6, PFAM = PF12710;PF01553)' T '11.3' 'lipid metabolism.Phospholipid synthesis' 'niben044scf00000747ctg008_1-4817' '(at1g15110 : 568.0) phosphatidyl serine synthase family protein; FUNCTIONS IN: CDP-diacylglycerol-serine O-phosphatidyltransferase activity; INVOLVED IN: phosphatidylserine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidyl serine synthase (InterPro:IPR004277); Has 335 Blast hits to 331 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 10; Plants - 65; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|37946 : 419.0) no description available & (gnl|cdd|66691 : 374.0) no description available & (reliability: 1136.0) & (original description: Putative PTDSS2, Description = Phosphatidylserine synthase 2, PFAM = PF03034)' T '11.3' 'lipid metabolism.Phospholipid synthesis' 'niben044scf00014872ctg004_512-7582' '(at2g39290 : 281.0) Encodes a phosphatidylglycerolphosphate synthase 2C which is dual-targeted into chloroplasts and mitochondria. Mutant plants have mutant chloroplasts but normal mitochondria.; phosphatidylglycerolphosphate synthase 1 (PGP1); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phosphatidylinositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 2 (TAIR:AT3G55030.1); Has 7695 Blast hits to 7695 proteins in 2371 species: Archae - 0; Bacteria - 5013; Metazoa - 112; Fungi - 127; Plants - 109; Viruses - 0; Other Eukaryotes - 2334 (source: NCBI BLink). & (gnl|cdd|36830 : 142.0) no description available & (gnl|cdd|83521 : 132.0) no description available & (reliability: 562.0) & (original description: Putative PGPS2, Description = CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2, PFAM = PF01066)' T '11.3' 'lipid metabolism.Phospholipid synthesis' 'niben044scf00014872ctg004_5148-7657' '(at3g55030 : 80.9) Encodes a phosphatidylglycerolphosphate synthase.; phosphatidylglycerolphosphate synthase 2 (PGPS2); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: microsome, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 1 (TAIR:AT2G39290.1); Has 7778 Blast hits to 7778 proteins in 2365 species: Archae - 2; Bacteria - 5045; Metazoa - 114; Fungi - 125; Plants - 120; Viruses - 0; Other Eukaryotes - 2372 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative PGP1, Description = Phosphatidylglycerolphosphate synthase, PFAM = )' T '11.3' 'lipid metabolism.Phospholipid synthesis' 'niben044scf00026025ctg010_2538-9851' '(q9m571|peamt_spiol : 798.0) Phosphoethanolamine N-methyltransferase (EC 2.1.1.103) - Spinacia oleracea (Spinach) & (at1g73600 : 794.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, phosphoethanolamine N-methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G18000.1); Has 22304 Blast hits to 21648 proteins in 2625 species: Archae - 587; Bacteria - 16224; Metazoa - 297; Fungi - 950; Plants - 536; Viruses - 5; Other Eukaryotes - 3705 (source: NCBI BLink). & (gnl|cdd|36483 : 275.0) no description available & (gnl|cdd|32411 : 95.3) no description available & (reliability: 1588.0) & (original description: Putative PEAMT, Description = Phosphoethanolamine N-methyltransferase, PFAM = PF13489;PF13649)' T '11.3' 'lipid metabolism.Phospholipid synthesis' 'niben044scf00047965ctg002_2002-8295' '(at2g39290 : 187.0) Encodes a phosphatidylglycerolphosphate synthase 2C which is dual-targeted into chloroplasts and mitochondria. Mutant plants have mutant chloroplasts but normal mitochondria.; phosphatidylglycerolphosphate synthase 1 (PGP1); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phosphatidylinositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 2 (TAIR:AT3G55030.1); Has 7695 Blast hits to 7695 proteins in 2371 species: Archae - 0; Bacteria - 5013; Metazoa - 112; Fungi - 127; Plants - 109; Viruses - 0; Other Eukaryotes - 2334 (source: NCBI BLink). & (gnl|cdd|36830 : 145.0) no description available & (gnl|cdd|83521 : 111.0) no description available & (reliability: 374.0) & (original description: Putative pgsA, Description = CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase), PFAM = PF01066)' T '11.3' 'lipid metabolism.Phospholipid synthesis' 'niben044scf00048573ctg006_9311-14154' '(at2g38110 : 760.0) Encodes a protein with glycerol-3-phosphate acyltransferase activity.; glycerol-3-phosphate acyltransferase 6 (GPAT6); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 8 (TAIR:AT4G00400.1); Has 444 Blast hits to 431 proteins in 52 species: Archae - 0; Bacteria - 47; Metazoa - 20; Fungi - 0; Plants - 368; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 1520.0) & (original description: Putative GPAT6, Description = Glycerol-3-phosphate 2-O-acyltransferase 6, PFAM = PF12710;PF01553)' T '11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf00128_304358-309033' '(at2g38110 : 554.0) Encodes a protein with glycerol-3-phosphate acyltransferase activity.; glycerol-3-phosphate acyltransferase 6 (GPAT6); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 8 (TAIR:AT4G00400.1); Has 444 Blast hits to 431 proteins in 52 species: Archae - 0; Bacteria - 47; Metazoa - 20; Fungi - 0; Plants - 368; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 1108.0) & (original description: Putative GPAT6, Description = Glycerol-3-phosphate 2-O-acyltransferase 6, PFAM = PF01553;PF12710)' T '11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf00369_890251-895134' '(at3g05510 : 494.0) Phospholipid/glycerol acyltransferase family protein; FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123), Tafazzin (InterPro:IPR000872); BEST Arabidopsis thaliana protein match is: Phospholipid/glycerol acyltransferase family protein (TAIR:AT1G78690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38058 : 297.0) no description available & (gnl|cdd|47863 : 82.7) no description available & (reliability: 988.0) & (original description: Putative BnaA03g29030D, Description = BnaA03g29030D protein, PFAM = PF01553)' T '11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf00884_43945-51712' '(at2g39290 : 267.0) Encodes a phosphatidylglycerolphosphate synthase 2C which is dual-targeted into chloroplasts and mitochondria. Mutant plants have mutant chloroplasts but normal mitochondria.; phosphatidylglycerolphosphate synthase 1 (PGP1); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phosphatidylinositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 2 (TAIR:AT3G55030.1); Has 7695 Blast hits to 7695 proteins in 2371 species: Archae - 0; Bacteria - 5013; Metazoa - 112; Fungi - 127; Plants - 109; Viruses - 0; Other Eukaryotes - 2334 (source: NCBI BLink). & (gnl|cdd|36830 : 146.0) no description available & (gnl|cdd|83521 : 132.0) no description available & (reliability: 534.0) & (original description: Putative PGPS2, Description = CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2, PFAM = PF01066)' T '11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf00884_49270-51797' '(at3g55030 : 83.2) Encodes a phosphatidylglycerolphosphate synthase.; phosphatidylglycerolphosphate synthase 2 (PGPS2); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: microsome, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 1 (TAIR:AT2G39290.1); Has 7778 Blast hits to 7778 proteins in 2365 species: Archae - 2; Bacteria - 5045; Metazoa - 114; Fungi - 125; Plants - 120; Viruses - 0; Other Eukaryotes - 2372 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative PGP1, Description = Phosphatidylglycerolphosphate synthase, PFAM = )' T '11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf01716_56767-61693' '(at1g01610 : 749.0) Encodes a protein with glycerol-3-phosphate acyltransferase activity. Involved in cutin assembly. Is functional redundant of GPAT8.; glycerol-3-phosphate acyltransferase 4 (GPAT4); FUNCTIONS IN: 1-acylglycerol-3-phosphate O-acyltransferase activity, acyltransferase activity; INVOLVED IN: metabolic process, cutin biosynthetic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 8 (TAIR:AT4G00400.1); Has 410 Blast hits to 396 proteins in 34 species: Archae - 0; Bacteria - 20; Metazoa - 10; Fungi - 0; Plants - 373; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 1498.0) & (original description: Putative GPAT4, Description = Glycerol-3-phosphate 2-O-acyltransferase 4, PFAM = PF12710;PF01553)' T '11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf02085_1007586-1011061' '(at2g38110 : 494.0) Encodes a protein with glycerol-3-phosphate acyltransferase activity.; glycerol-3-phosphate acyltransferase 6 (GPAT6); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 8 (TAIR:AT4G00400.1); Has 444 Blast hits to 431 proteins in 52 species: Archae - 0; Bacteria - 47; Metazoa - 20; Fungi - 0; Plants - 368; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 988.0) & (original description: Putative GPAT5, Description = Glycerol-3-phosphate acyltransferase 5, PFAM = PF01553;PF12710)' T '11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf02541_671725-678269' '(at4g04870 : 278.0) Encodes a protein with cardiolipin synthase activity that is localized to the mitochondiria.; cardiolipin synthase (CLS); FUNCTIONS IN: phosphatidyltransferase activity, cardiolipin synthase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 2 (TAIR:AT3G55030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36830 : 170.0) no description available & (reliability: 556.0) & (original description: Putative CLS, Description = Cardiolipin synthase (CMP-forming), mitochondrial, PFAM = PF01066)' T '11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf02806_103077-107519' '(at2g38110 : 506.0) Encodes a protein with glycerol-3-phosphate acyltransferase activity.; glycerol-3-phosphate acyltransferase 6 (GPAT6); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 8 (TAIR:AT4G00400.1); Has 444 Blast hits to 431 proteins in 52 species: Archae - 0; Bacteria - 47; Metazoa - 20; Fungi - 0; Plants - 368; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 1012.0) & (original description: Putative GPAT6, Description = Glycerol-3-phosphate 2-O-acyltransferase 6, PFAM = PF01553;PF12710)' T '11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf02919_424387-432031' '(at3g18000 : 778.0) Arabidopsis thaliana N-methyltransferase-like protein mRNA. Reduce transmission through pollen.; XIPOTL 1 (XPL1); CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G48600.2); Has 22524 Blast hits to 22132 proteins in 2666 species: Archae - 571; Bacteria - 16701; Metazoa - 242; Fungi - 923; Plants - 574; Viruses - 10; Other Eukaryotes - 3503 (source: NCBI BLink). & (q9fr44|peam1_arath : 778.0) Phosphoethanolamine N-methyltransferase 1 (EC 2.1.1.103) (PEAMT 1) (AtNMT1) - Arabidopsis thaliana (Mouse-ear cress) & (gnl|cdd|36483 : 245.0) no description available & (gnl|cdd|32411 : 94.2) no description available & (reliability: 1556.0) & (original description: Putative pmt, Description = Phosphoethanolamine N-methyltransferase, PFAM = PF08241;PF13489)' T '11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf03795_13499-19915' '(at1g06520 : 564.0) Encodes a membrane associated mitochondrial localized protein with glycerol-3-phosphate acyltransferase activity.Expressed in flower buds and siliques. Homozygous mutant plants are male sterile and have abnormal glycerolipid levels.; glycerol-3-phosphate acyltransferase 1 (GPAT1); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 2 (TAIR:AT1G02390.1); Has 381 Blast hits to 368 proteins in 28 species: Archae - 0; Bacteria - 6; Metazoa - 8; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 1128.0) & (original description: Putative GPAT1, Description = Glycerol-3-phosphate acyltransferase 1, PFAM = PF12710)' T '11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf04024_121662-129072' '(at1g15110 : 696.0) phosphatidyl serine synthase family protein; FUNCTIONS IN: CDP-diacylglycerol-serine O-phosphatidyltransferase activity; INVOLVED IN: phosphatidylserine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidyl serine synthase (InterPro:IPR004277); Has 335 Blast hits to 331 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 10; Plants - 65; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|37946 : 503.0) no description available & (gnl|cdd|66691 : 384.0) no description available & (reliability: 1392.0) & (original description: Putative PSS1, Description = CDP-diacylglycerol--serine O-phosphatidyltransferase 1, PFAM = PF03034)' T '11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf05009_19015-27163' '(at2g39290 : 177.0) Encodes a phosphatidylglycerolphosphate synthase 2C which is dual-targeted into chloroplasts and mitochondria. Mutant plants have mutant chloroplasts but normal mitochondria.; phosphatidylglycerolphosphate synthase 1 (PGP1); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phosphatidylinositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 2 (TAIR:AT3G55030.1); Has 7695 Blast hits to 7695 proteins in 2371 species: Archae - 0; Bacteria - 5013; Metazoa - 112; Fungi - 127; Plants - 109; Viruses - 0; Other Eukaryotes - 2334 (source: NCBI BLink). & (gnl|cdd|36830 : 145.0) no description available & (gnl|cdd|83521 : 110.0) no description available & (reliability: 354.0) & (original description: Putative pgsA, Description = CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase), PFAM = PF01066)' T '11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf05629_64058-68038' '(at3g11430 : 634.0) Encodes a protein with glycerol-3-phosphate acyltransferase activity, involved in the biosynthesis of suberin polyester.; glycerol-3-phosphate acyltransferase 5 (GPAT5); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 7 (TAIR:AT5G06090.1); Has 397 Blast hits to 386 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 0; Plants - 368; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 1268.0) & (original description: Putative GPAT5, Description = Glycerol-3-phosphate acyltransferase 5, PFAM = PF01553)' T '11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf06950_1190-8825' '(at2g46090 : 481.0) Encodes a putative sphingosine kinase (SphK) containing the five conserved domains (C1-C5) previously identified in SphKs.; Diacylglycerol kinase family protein; FUNCTIONS IN: diacylglycerol kinase activity, D-erythro-sphingosine kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Conserved hypothetical protein CHP00147 (InterPro:IPR005218); BEST Arabidopsis thaliana protein match is: long-chain base (LCB) kinase 1 (TAIR:AT5G23450.2); Has 6078 Blast hits to 6077 proteins in 1657 species: Archae - 15; Bacteria - 4829; Metazoa - 327; Fungi - 124; Plants - 145; Viruses - 0; Other Eukaryotes - 638 (source: NCBI BLink). & (gnl|cdd|31785 : 195.0) no description available & (gnl|cdd|36332 : 183.0) no description available & (reliability: 962.0) & (original description: Putative LCKB2, Description = Sphingoid long-chain bases kinase 2, mitochondrial, PFAM = PF00781)' T '11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf08653_657550-672834' '(at3g18000 : 839.0) Arabidopsis thaliana N-methyltransferase-like protein mRNA. Reduce transmission through pollen.; XIPOTL 1 (XPL1); CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G48600.2); Has 22524 Blast hits to 22132 proteins in 2666 species: Archae - 571; Bacteria - 16701; Metazoa - 242; Fungi - 923; Plants - 574; Viruses - 10; Other Eukaryotes - 3503 (source: NCBI BLink). & (q9fr44|peam1_arath : 839.0) Phosphoethanolamine N-methyltransferase 1 (EC 2.1.1.103) (PEAMT 1) (AtNMT1) - Arabidopsis thaliana (Mouse-ear cress) & (gnl|cdd|36483 : 277.0) no description available & (gnl|cdd|32411 : 96.1) no description available & (reliability: 1678.0) & (original description: Putative NMT1, Description = Phosphoethanolamine N-methyltransferase 1, PFAM = PF08241;PF13489)' T '11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf08973_129217-134131' '(at3g11430 : 655.0) Encodes a protein with glycerol-3-phosphate acyltransferase activity, involved in the biosynthesis of suberin polyester.; glycerol-3-phosphate acyltransferase 5 (GPAT5); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 7 (TAIR:AT5G06090.1); Has 397 Blast hits to 386 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 0; Plants - 368; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 1310.0) & (original description: Putative GPAT4, Description = Phospholipid/glycerol acyltransferase, PFAM = PF01553)' T '11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf10067_306673-311434' '(at3g11430 : 647.0) Encodes a protein with glycerol-3-phosphate acyltransferase activity, involved in the biosynthesis of suberin polyester.; glycerol-3-phosphate acyltransferase 5 (GPAT5); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 7 (TAIR:AT5G06090.1); Has 397 Blast hits to 386 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 0; Plants - 368; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 1294.0) & (original description: Putative GPAT5, Description = Glycerol-3-phosphate acyltransferase 5, PFAM = PF01553)' T '11.3' 'lipid metabolism.Phospholipid synthesis' 'niben101scf13601_17094-28883' '(at1g15110 : 689.0) phosphatidyl serine synthase family protein; FUNCTIONS IN: CDP-diacylglycerol-serine O-phosphatidyltransferase activity; INVOLVED IN: phosphatidylserine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidyl serine synthase (InterPro:IPR004277); Has 335 Blast hits to 331 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 10; Plants - 65; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|37946 : 495.0) no description available & (gnl|cdd|66691 : 384.0) no description available & (reliability: 1378.0) & (original description: Putative PSS1, Description = CDP-diacylglycerol--serine O-phosphatidyltransferase 1, PFAM = PF03034)' T '11.3.1' 'lipid metabolism.Phospholipid synthesis.1-acylglycerol-3-phosphate O-acyltransferase' 'nbv0.5scaffold813_511277-519685' '(q41745|lpat_maize : 425.0) 1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1 (EC 2.3.1.51) (Phospholipid synthesis protein 1) - Zea mays (Maize) & (at3g57650 : 418.0) Encodes an endoplasmic reticulum localized protein with lysophosphatidyl acyltransferase activity.; lysophosphatidyl acyltransferase 2 (LPAT2); FUNCTIONS IN: 1-acylglycerol-3-phosphate O-acyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 3 (TAIR:AT1G51260.1); Has 1646 Blast hits to 1643 proteins in 516 species: Archae - 0; Bacteria - 639; Metazoa - 536; Fungi - 213; Plants - 138; Viruses - 2; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|36718 : 295.0) no description available & (reliability: 836.0) & (original description: Putative LPAT2, Description = 1-acyl-sn-glycerol-3-phosphate acyltransferase 2, PFAM = PF01553;PF16076)' T '11.3.1' 'lipid metabolism.Phospholipid synthesis.1-acylglycerol-3-phosphate O-acyltransferase' 'niben101scf01124_1622701-1632081' '(at3g57650 : 591.0) Encodes an endoplasmic reticulum localized protein with lysophosphatidyl acyltransferase activity.; lysophosphatidyl acyltransferase 2 (LPAT2); FUNCTIONS IN: 1-acylglycerol-3-phosphate O-acyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 3 (TAIR:AT1G51260.1); Has 1646 Blast hits to 1643 proteins in 516 species: Archae - 0; Bacteria - 639; Metazoa - 536; Fungi - 213; Plants - 138; Viruses - 2; Other Eukaryotes - 118 (source: NCBI BLink). & (q9xfw4|lpat2_brana : 585.0) 1-acyl-sn-glycerol-3-phosphate acyltransferase 2 (EC 2.3.1.51) (Lysophosphatidyl acyltransferase 2) - Brassica napus (Rape) & (gnl|cdd|36718 : 336.0) no description available & (reliability: 1182.0) & (original description: Putative LPAT2, Description = 1-acyl-sn-glycerol-3-phosphate acyltransferase 2, PFAM = PF16076;PF01553)' T '11.3.1' 'lipid metabolism.Phospholipid synthesis.1-acylglycerol-3-phosphate O-acyltransferase' 'niben101scf01822_1302499-1323646' '(q39639|plsb_cucsa : 569.0) Glycerol-3-phosphate acyltransferase, chloroplast precursor (EC 2.3.1.15) (GPAT) - Cucumis sativus (Cucumber) & (at1g32200 : 550.0) Encodes a chloroplast glycerol-3-phosphate acyltransferase.Involved in the biosynthesis of chloroplast phosphatidylglycerol.; ATS1; FUNCTIONS IN: glycerol-3-phosphate O-acyltransferase activity; INVOLVED IN: phosphatidylglycerol biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123), Glycerol-3-phosphate O-acyltransferase (InterPro:IPR016222); Has 391 Blast hits to 391 proteins in 121 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 291; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|65360 : 91.5) no description available & (reliability: 1100.0) & (original description: Putative ATS1, Description = Glycerol-3-phosphate acyltransferase, chloroplastic, PFAM = PF14829;PF01553)' T '11.3.1' 'lipid metabolism.Phospholipid synthesis.1-acylglycerol-3-phosphate O-acyltransferase' 'niben101scf01859_576671-579981' '(at1g75020 : 460.0) lysophosphatidyl acyltransferase 4 (LPAT4); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 5 (TAIR:AT3G18850.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36718 : 306.0) no description available & (q6iwy1|lpat2_braol : 169.0) 1-acyl-sn-glycerol-3-phosphate acyltransferase 2 (EC 2.3.1.51) (Lysophosphatidyl acyltransferase 2) - Brassica oleracea (Wild cabbage) & (reliability: 920.0) & (original description: Putative LPAT4, Description = Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 4, PFAM = PF01553;PF16076)' T '11.3.1' 'lipid metabolism.Phospholipid synthesis.1-acylglycerol-3-phosphate O-acyltransferase' 'niben101scf02436_14899-29826' '(q39639|plsb_cucsa : 565.0) Glycerol-3-phosphate acyltransferase, chloroplast precursor (EC 2.3.1.15) (GPAT) - Cucumis sativus (Cucumber) & (at1g32200 : 546.0) Encodes a chloroplast glycerol-3-phosphate acyltransferase.Involved in the biosynthesis of chloroplast phosphatidylglycerol.; ATS1; FUNCTIONS IN: glycerol-3-phosphate O-acyltransferase activity; INVOLVED IN: phosphatidylglycerol biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123), Glycerol-3-phosphate O-acyltransferase (InterPro:IPR016222); Has 391 Blast hits to 391 proteins in 121 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 291; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|65360 : 86.9) no description available & (reliability: 1092.0) & (original description: Putative gpat, Description = Glycerol-3-phosphate acyltransferase, chloroplastic, PFAM = PF01553;PF14829)' T '11.3.1' 'lipid metabolism.Phospholipid synthesis.1-acylglycerol-3-phosphate O-acyltransferase' 'niben101scf05799_95094-107123' '(at1g75020 : 349.0) lysophosphatidyl acyltransferase 4 (LPAT4); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 5 (TAIR:AT3G18850.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36718 : 230.0) no description available & (q6iwy1|lpat2_braol : 123.0) 1-acyl-sn-glycerol-3-phosphate acyltransferase 2 (EC 2.3.1.51) (Lysophosphatidyl acyltransferase 2) - Brassica oleracea (Wild cabbage) & (reliability: 698.0) & (original description: Putative LPAT4, Description = Phospholipid/glycerol acyltransferase family protein, PFAM = PF01553;PF16076)' T '11.3.1' 'lipid metabolism.Phospholipid synthesis.1-acylglycerol-3-phosphate O-acyltransferase' 'niben101scf06782_128766-148823' '(q6iwy1|lpat2_braol : 142.0) 1-acyl-sn-glycerol-3-phosphate acyltransferase 2 (EC 2.3.1.51) (Lysophosphatidyl acyltransferase 2) - Brassica oleracea (Wild cabbage) & (at3g57650 : 141.0) Encodes an endoplasmic reticulum localized protein with lysophosphatidyl acyltransferase activity.; lysophosphatidyl acyltransferase 2 (LPAT2); FUNCTIONS IN: 1-acylglycerol-3-phosphate O-acyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 3 (TAIR:AT1G51260.1); Has 1646 Blast hits to 1643 proteins in 516 species: Archae - 0; Bacteria - 639; Metazoa - 536; Fungi - 213; Plants - 138; Viruses - 2; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|36718 : 105.0) no description available & (reliability: 282.0) & (original description: Putative LPAT, Description = 1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1, PFAM = )' T '11.3.1' 'lipid metabolism.Phospholipid synthesis.1-acylglycerol-3-phosphate O-acyltransferase' 'niben101scf10575_190316-194733' '(at3g18850 : 460.0) lysophosphatidyl acyltransferase 5 (LPAT5); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 4 (TAIR:AT1G75020.2); Has 1643 Blast hits to 1638 proteins in 497 species: Archae - 0; Bacteria - 573; Metazoa - 538; Fungi - 198; Plants - 153; Viruses - 6; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|36718 : 288.0) no description available & (q6iwy1|lpat2_braol : 172.0) 1-acyl-sn-glycerol-3-phosphate acyltransferase 2 (EC 2.3.1.51) (Lysophosphatidyl acyltransferase 2) - Brassica oleracea (Wild cabbage) & (gnl|cdd|47863 : 82.3) no description available & (reliability: 920.0) & (original description: Putative LPAT5, Description = Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 5, PFAM = PF01553;PF16076)' T '11.3.2' 'lipid metabolism.Phospholipid synthesis.choline kinase' 'nbv0.5scaffold1588_314581-320861' '(at1g71697 : 428.0) Encodes choline kinase. mRNA levels are increased in response to wounding.; choline kinase 1 (CK1); FUNCTIONS IN: choline kinase activity; INVOLVED IN: response to salt stress, response to wounding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Choline kinase, N-terminal (InterPro:IPR007521), Choline/ethanolamine kinase (InterPro:IPR002573), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G09760.1); Has 1492 Blast hits to 1438 proteins in 366 species: Archae - 0; Bacteria - 350; Metazoa - 439; Fungi - 247; Plants - 163; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink). & (gnl|cdd|37897 : 351.0) no description available & (gnl|cdd|85580 : 251.0) no description available & (reliability: 856.0) & (original description: Putative CK1, Description = Probable choline kinase 1, PFAM = PF01633)' T '11.3.2' 'lipid metabolism.Phospholipid synthesis.choline kinase' 'niben101scf00271_910736-921499' '(at1g74320 : 474.0) encodes a choline kinase, whose expression is induced by high salt and mannitol.; Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: Choline/ethanolamine kinase (InterPro:IPR002573), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G09760.1); Has 1486 Blast hits to 1432 proteins in 373 species: Archae - 0; Bacteria - 346; Metazoa - 438; Fungi - 245; Plants - 167; Viruses - 0; Other Eukaryotes - 290 (source: NCBI BLink). & (gnl|cdd|37897 : 332.0) no description available & (gnl|cdd|85580 : 245.0) no description available & (reliability: 948.0) & (original description: Putative ck1, Description = Choline/ethanolamine kinase, PFAM = PF01633)' T '11.3.2' 'lipid metabolism.Phospholipid synthesis.choline kinase' 'niben101scf01060_265360-271660' '(at1g74320 : 468.0) encodes a choline kinase, whose expression is induced by high salt and mannitol.; Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: Choline/ethanolamine kinase (InterPro:IPR002573), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G09760.1); Has 1486 Blast hits to 1432 proteins in 373 species: Archae - 0; Bacteria - 346; Metazoa - 438; Fungi - 245; Plants - 167; Viruses - 0; Other Eukaryotes - 290 (source: NCBI BLink). & (gnl|cdd|37897 : 334.0) no description available & (gnl|cdd|85580 : 250.0) no description available & (reliability: 936.0) & (original description: Putative ck1, Description = Choline/ethanolamine kinase, PFAM = PF01633)' T '11.3.2' 'lipid metabolism.Phospholipid synthesis.choline kinase' 'niben101scf02312_36110-51678' '(at2g26830 : 523.0) embryo defective 1187 (emb1187); CONTAINS InterPro DOMAIN/s: Choline/ethanolamine kinase (InterPro:IPR002573), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G09760.1); Has 1627 Blast hits to 1577 proteins in 424 species: Archae - 0; Bacteria - 424; Metazoa - 442; Fungi - 246; Plants - 164; Viruses - 0; Other Eukaryotes - 351 (source: NCBI BLink). & (gnl|cdd|39918 : 392.0) no description available & (gnl|cdd|85580 : 213.0) no description available & (reliability: 1046.0) & (original description: Putative EMB1187, Description = Probable ethanolamine kinase, PFAM = PF01633)' T '11.3.2' 'lipid metabolism.Phospholipid synthesis.choline kinase' 'niben101scf04103_503254-517019' '(at2g26830 : 530.0) embryo defective 1187 (emb1187); CONTAINS InterPro DOMAIN/s: Choline/ethanolamine kinase (InterPro:IPR002573), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G09760.1); Has 1627 Blast hits to 1577 proteins in 424 species: Archae - 0; Bacteria - 424; Metazoa - 442; Fungi - 246; Plants - 164; Viruses - 0; Other Eukaryotes - 351 (source: NCBI BLink). & (gnl|cdd|39918 : 396.0) no description available & (gnl|cdd|85580 : 212.0) no description available & (reliability: 1060.0) & (original description: Putative EMB1187, Description = Probable ethanolamine kinase, PFAM = PF01633)' T '11.3.2' 'lipid metabolism.Phospholipid synthesis.choline kinase' 'niben101scf09156_4455-107900' '(at1g71697 : 177.0) Encodes choline kinase. mRNA levels are increased in response to wounding.; choline kinase 1 (CK1); FUNCTIONS IN: choline kinase activity; INVOLVED IN: response to salt stress, response to wounding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Choline kinase, N-terminal (InterPro:IPR007521), Choline/ethanolamine kinase (InterPro:IPR002573), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G09760.1); Has 1492 Blast hits to 1438 proteins in 366 species: Archae - 0; Bacteria - 350; Metazoa - 439; Fungi - 247; Plants - 163; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink). & (gnl|cdd|37897 : 147.0) no description available & (gnl|cdd|85580 : 131.0) no description available & (reliability: 354.0) & (original description: Putative ck1, Description = Choline/ethanolamine kinase, PFAM = PF01633)' T '11.3.2' 'lipid metabolism.Phospholipid synthesis.choline kinase' 'niben101scf20077_17643-22658' '(at1g74320 : 447.0) encodes a choline kinase, whose expression is induced by high salt and mannitol.; Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: Choline/ethanolamine kinase (InterPro:IPR002573), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G09760.1); Has 1486 Blast hits to 1432 proteins in 373 species: Archae - 0; Bacteria - 346; Metazoa - 438; Fungi - 245; Plants - 167; Viruses - 0; Other Eukaryotes - 290 (source: NCBI BLink). & (gnl|cdd|37897 : 353.0) no description available & (gnl|cdd|85580 : 250.0) no description available & (reliability: 894.0) & (original description: Putative ck1, Description = Choline/ethanolamine kinase, PFAM = PF01633)' T '11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'nbv0.3scaffold18126_9083-17076' '(at2g39290 : 242.0) Encodes a phosphatidylglycerolphosphate synthase 2C which is dual-targeted into chloroplasts and mitochondria. Mutant plants have mutant chloroplasts but normal mitochondria.; phosphatidylglycerolphosphate synthase 1 (PGP1); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phosphatidylinositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 2 (TAIR:AT3G55030.1); Has 7695 Blast hits to 7695 proteins in 2371 species: Archae - 0; Bacteria - 5013; Metazoa - 112; Fungi - 127; Plants - 109; Viruses - 0; Other Eukaryotes - 2334 (source: NCBI BLink). & (gnl|cdd|36830 : 156.0) no description available & (gnl|cdd|83521 : 135.0) no description available & (reliability: 466.0) & (original description: Putative PGPS2, Description = CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2, PFAM = PF01066)' T '11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'nbv0.3scaffold54407_1-13641' '(at3g60620 : 402.0) cytidinediphosphate diacylglycerol synthase 5 (CDS5); FUNCTIONS IN: phosphatidate cytidylyltransferase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: chloroplast, plastid, membrane, chloroplast envelope; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374); BEST Arabidopsis thaliana protein match is: cytidinediphosphate diacylglycerol synthase 4 (TAIR:AT2G45150.1); Has 7499 Blast hits to 7495 proteins in 2619 species: Archae - 0; Bacteria - 5196; Metazoa - 180; Fungi - 139; Plants - 139; Viruses - 0; Other Eukaryotes - 1845 (source: NCBI BLink). & (gnl|cdd|36653 : 286.0) no description available & (gnl|cdd|85270 : 166.0) no description available & (reliability: 804.0) & (original description: Putative CDS5, Description = Phosphatidate cytidylyltransferase 5, chloroplastic, PFAM = PF01148)' T '11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'nbv0.5scaffold501_164246-178573' '(at3g60620 : 431.0) cytidinediphosphate diacylglycerol synthase 5 (CDS5); FUNCTIONS IN: phosphatidate cytidylyltransferase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: chloroplast, plastid, membrane, chloroplast envelope; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374); BEST Arabidopsis thaliana protein match is: cytidinediphosphate diacylglycerol synthase 4 (TAIR:AT2G45150.1); Has 7499 Blast hits to 7495 proteins in 2619 species: Archae - 0; Bacteria - 5196; Metazoa - 180; Fungi - 139; Plants - 139; Viruses - 0; Other Eukaryotes - 1845 (source: NCBI BLink). & (gnl|cdd|36653 : 284.0) no description available & (gnl|cdd|85270 : 161.0) no description available & (reliability: 862.0) & (original description: Putative CDS4, Description = Phosphatidate cytidylyltransferase 4, chloroplastic, PFAM = PF01148)' T '11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben044scf00014872ctg004_512-7582' '(at2g39290 : 281.0) Encodes a phosphatidylglycerolphosphate synthase 2C which is dual-targeted into chloroplasts and mitochondria. Mutant plants have mutant chloroplasts but normal mitochondria.; phosphatidylglycerolphosphate synthase 1 (PGP1); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phosphatidylinositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 2 (TAIR:AT3G55030.1); Has 7695 Blast hits to 7695 proteins in 2371 species: Archae - 0; Bacteria - 5013; Metazoa - 112; Fungi - 127; Plants - 109; Viruses - 0; Other Eukaryotes - 2334 (source: NCBI BLink). & (gnl|cdd|36830 : 142.0) no description available & (gnl|cdd|83521 : 132.0) no description available & (reliability: 554.0) & (original description: Putative PGPS2, Description = CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2, PFAM = PF01066)' T '11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben044scf00014872ctg004_5148-7657' '(at3g55030 : 80.9) Encodes a phosphatidylglycerolphosphate synthase.; phosphatidylglycerolphosphate synthase 2 (PGPS2); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: microsome, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 1 (TAIR:AT2G39290.1); Has 7778 Blast hits to 7778 proteins in 2365 species: Archae - 2; Bacteria - 5045; Metazoa - 114; Fungi - 125; Plants - 120; Viruses - 0; Other Eukaryotes - 2372 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative PGP1, Description = Phosphatidylglycerolphosphate synthase, PFAM = )' T '11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben044scf00047965ctg002_2002-8295' '(at2g39290 : 187.0) Encodes a phosphatidylglycerolphosphate synthase 2C which is dual-targeted into chloroplasts and mitochondria. Mutant plants have mutant chloroplasts but normal mitochondria.; phosphatidylglycerolphosphate synthase 1 (PGP1); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phosphatidylinositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 2 (TAIR:AT3G55030.1); Has 7695 Blast hits to 7695 proteins in 2371 species: Archae - 0; Bacteria - 5013; Metazoa - 112; Fungi - 127; Plants - 109; Viruses - 0; Other Eukaryotes - 2334 (source: NCBI BLink). & (gnl|cdd|36830 : 145.0) no description available & (gnl|cdd|83521 : 111.0) no description available & (reliability: 362.0) & (original description: Putative pgsA, Description = CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase), PFAM = PF01066)' T '11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben044scf00058295ctg002_1265-5156' '(at3g60620 : 145.0) cytidinediphosphate diacylglycerol synthase 5 (CDS5); FUNCTIONS IN: phosphatidate cytidylyltransferase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: chloroplast, plastid, membrane, chloroplast envelope; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374); BEST Arabidopsis thaliana protein match is: cytidinediphosphate diacylglycerol synthase 4 (TAIR:AT2G45150.1); Has 7499 Blast hits to 7495 proteins in 2619 species: Archae - 0; Bacteria - 5196; Metazoa - 180; Fungi - 139; Plants - 139; Viruses - 0; Other Eukaryotes - 1845 (source: NCBI BLink). & (gnl|cdd|36653 : 121.0) no description available & (gnl|cdd|85270 : 98.9) no description available & (reliability: 290.0) & (original description: Putative cdsA, Description = Phosphatidate cytidylyltransferase, PFAM = PF01148)' T '11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben101scf00288_1249098-1254751' '(q2n2k0|phyk3_soybn : 339.0) Probable phytol kinase 3, chloroplast precursor (EC 2.7.-.-) - Glycine max (Soybean) & (at5g58560 : 333.0) Phosphatidate cytidylyltransferase family protein; FUNCTIONS IN: phosphatidate cytidylyltransferase activity, transferase activity, transferring phosphorus-containing groups; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374); BEST Arabidopsis thaliana protein match is: vitamin E pathway gene 5 (TAIR:AT5G04490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39654 : 184.0) no description available & (reliability: 666.0) & (original description: Putative FOLK, Description = Farnesol kinase, chloroplastic, PFAM = )' T '11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben101scf00288_1250135-1252529' '(at5g58560 : 86.7) Phosphatidate cytidylyltransferase family protein; FUNCTIONS IN: phosphatidate cytidylyltransferase activity, transferase activity, transferring phosphorus-containing groups; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374); BEST Arabidopsis thaliana protein match is: vitamin E pathway gene 5 (TAIR:AT5G04490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative FOLK, Description = Putative phytol kinase 3, chloroplastic, PFAM = )' T '11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben101scf00486_313177-322340' '(o04940|cds1_soltu : 783.0) Phosphatidate cytidylyltransferase (EC 2.7.7.41) (CDP-diglyceride synthetase) (CDP-diglyceride pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS) (CTP:phosphatidate cytidylyltransferase) (CDP-DAG synthase) (CDP-DG synthetase) - Sola & (at4g22340 : 658.0) cytidinediphosphate diacylglycerol synthase 2 (CDS2); FUNCTIONS IN: phosphatidate cytidylyltransferase activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374), Phosphatidate cytidylyltransferase, eukaryota (InterPro:IPR016720); BEST Arabidopsis thaliana protein match is: CDP-diacylglycerol synthase 1 (TAIR:AT1G62430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36653 : 500.0) no description available & (gnl|cdd|85270 : 179.0) no description available & (reliability: 1316.0) & (original description: Putative CDS1, Description = Phosphatidate cytidylyltransferase 1, PFAM = PF01148)' T '11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben101scf00884_43945-51712' '(at2g39290 : 267.0) Encodes a phosphatidylglycerolphosphate synthase 2C which is dual-targeted into chloroplasts and mitochondria. Mutant plants have mutant chloroplasts but normal mitochondria.; phosphatidylglycerolphosphate synthase 1 (PGP1); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phosphatidylinositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 2 (TAIR:AT3G55030.1); Has 7695 Blast hits to 7695 proteins in 2371 species: Archae - 0; Bacteria - 5013; Metazoa - 112; Fungi - 127; Plants - 109; Viruses - 0; Other Eukaryotes - 2334 (source: NCBI BLink). & (gnl|cdd|36830 : 146.0) no description available & (gnl|cdd|83521 : 132.0) no description available & (reliability: 526.0) & (original description: Putative PGPS2, Description = CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2, PFAM = PF01066)' T '11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben101scf00884_49270-51797' '(at3g55030 : 83.2) Encodes a phosphatidylglycerolphosphate synthase.; phosphatidylglycerolphosphate synthase 2 (PGPS2); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: microsome, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 1 (TAIR:AT2G39290.1); Has 7778 Blast hits to 7778 proteins in 2365 species: Archae - 2; Bacteria - 5045; Metazoa - 114; Fungi - 125; Plants - 120; Viruses - 0; Other Eukaryotes - 2372 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative PGP1, Description = Phosphatidylglycerolphosphate synthase, PFAM = )' T '11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben101scf02362_314223-321179' '(at5g58560 : 268.0) Phosphatidate cytidylyltransferase family protein; FUNCTIONS IN: phosphatidate cytidylyltransferase activity, transferase activity, transferring phosphorus-containing groups; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374); BEST Arabidopsis thaliana protein match is: vitamin E pathway gene 5 (TAIR:AT5G04490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q2n2k0|phyk3_soybn : 262.0) Probable phytol kinase 3, chloroplast precursor (EC 2.7.-.-) - Glycine max (Soybean) & (gnl|cdd|39654 : 155.0) no description available & (reliability: 536.0) & (original description: Putative BnaA03g56250D, Description = BnaA03g56250D protein, PFAM = )' T '11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben101scf03599_186400-202123' '(at3g60620 : 437.0) cytidinediphosphate diacylglycerol synthase 5 (CDS5); FUNCTIONS IN: phosphatidate cytidylyltransferase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: chloroplast, plastid, membrane, chloroplast envelope; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374); BEST Arabidopsis thaliana protein match is: cytidinediphosphate diacylglycerol synthase 4 (TAIR:AT2G45150.1); Has 7499 Blast hits to 7495 proteins in 2619 species: Archae - 0; Bacteria - 5196; Metazoa - 180; Fungi - 139; Plants - 139; Viruses - 0; Other Eukaryotes - 1845 (source: NCBI BLink). & (gnl|cdd|36653 : 291.0) no description available & (gnl|cdd|85270 : 165.0) no description available & (reliability: 874.0) & (original description: Putative CDS4, Description = Phosphatidate cytidylyltransferase 4, chloroplastic, PFAM = PF01148)' T '11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben101scf03824_315923-328714' '(o04940|cds1_soltu : 713.0) Phosphatidate cytidylyltransferase (EC 2.7.7.41) (CDP-diglyceride synthetase) (CDP-diglyceride pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS) (CTP:phosphatidate cytidylyltransferase) (CDP-DAG synthase) (CDP-DG synthetase) - Sola & (at4g22340 : 655.0) cytidinediphosphate diacylglycerol synthase 2 (CDS2); FUNCTIONS IN: phosphatidate cytidylyltransferase activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374), Phosphatidate cytidylyltransferase, eukaryota (InterPro:IPR016720); BEST Arabidopsis thaliana protein match is: CDP-diacylglycerol synthase 1 (TAIR:AT1G62430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36653 : 509.0) no description available & (gnl|cdd|85270 : 174.0) no description available & (reliability: 1310.0) & (original description: Putative CDS1, Description = Phosphatidate cytidylyltransferase 1, PFAM = PF01148)' T '11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben101scf03824_322229-325289' '(at1g62430 : 246.0) Encodes a CDP-diacylglycerol synthase, involved in phospholipid biosynthesis.; CDP-diacylglycerol synthase 1 (CDS1); CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374), Phosphatidate cytidylyltransferase, eukaryota (InterPro:IPR016720); BEST Arabidopsis thaliana protein match is: cytidinediphosphate diacylglycerol synthase 2 (TAIR:AT4G22340.1); Has 7098 Blast hits to 7086 proteins in 2534 species: Archae - 0; Bacteria - 4982; Metazoa - 186; Fungi - 135; Plants - 138; Viruses - 0; Other Eukaryotes - 1657 (source: NCBI BLink). & (o04940|cds1_soltu : 239.0) Phosphatidate cytidylyltransferase (EC 2.7.7.41) (CDP-diglyceride synthetase) (CDP-diglyceride pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS) (CTP:phosphatidate cytidylyltransferase) (CDP-DAG synthase) (CDP-DG synthetase) - Sola & (gnl|cdd|36653 : 190.0) no description available & (reliability: 492.0) & (original description: Putative cds1, Description = Phosphatidate cytidylyltransferase, PFAM = PF01148)' T '11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben101scf04987_115660-126669' '(o04940|cds1_soltu : 614.0) Phosphatidate cytidylyltransferase (EC 2.7.7.41) (CDP-diglyceride synthetase) (CDP-diglyceride pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS) (CTP:phosphatidate cytidylyltransferase) (CDP-DAG synthase) (CDP-DG synthetase) - Sola & (at4g22340 : 550.0) cytidinediphosphate diacylglycerol synthase 2 (CDS2); FUNCTIONS IN: phosphatidate cytidylyltransferase activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374), Phosphatidate cytidylyltransferase, eukaryota (InterPro:IPR016720); BEST Arabidopsis thaliana protein match is: CDP-diacylglycerol synthase 1 (TAIR:AT1G62430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36653 : 421.0) no description available & (gnl|cdd|85270 : 175.0) no description available & (reliability: 1100.0) & (original description: Putative CDS1, Description = Phosphatidate cytidylyltransferase, PFAM = PF01148)' T '11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben101scf05009_19015-27163' '(at2g39290 : 177.0) Encodes a phosphatidylglycerolphosphate synthase 2C which is dual-targeted into chloroplasts and mitochondria. Mutant plants have mutant chloroplasts but normal mitochondria.; phosphatidylglycerolphosphate synthase 1 (PGP1); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phosphatidylinositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 2 (TAIR:AT3G55030.1); Has 7695 Blast hits to 7695 proteins in 2371 species: Archae - 0; Bacteria - 5013; Metazoa - 112; Fungi - 127; Plants - 109; Viruses - 0; Other Eukaryotes - 2334 (source: NCBI BLink). & (gnl|cdd|36830 : 145.0) no description available & (gnl|cdd|83521 : 110.0) no description available & (reliability: 342.0) & (original description: Putative pgsA, Description = CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase), PFAM = PF01066)' T '11.3.3' 'lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase' 'niben101scf11895_293352-299375' '(at4g26770 : 554.0) Phosphatidate cytidylyltransferase family protein; FUNCTIONS IN: phosphatidate cytidylyltransferase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: petal, leaf whorl, flower, pollen tube; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374), Phosphatidate cytidylyltransferase, eukaryota (InterPro:IPR016720); BEST Arabidopsis thaliana protein match is: CDP-diacylglycerol synthase 1 (TAIR:AT1G62430.1); Has 7211 Blast hits to 7203 proteins in 2581 species: Archae - 0; Bacteria - 5077; Metazoa - 186; Fungi - 148; Plants - 138; Viruses - 0; Other Eukaryotes - 1662 (source: NCBI BLink). & (o04940|cds1_soltu : 533.0) Phosphatidate cytidylyltransferase (EC 2.7.7.41) (CDP-diglyceride synthetase) (CDP-diglyceride pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS) (CTP:phosphatidate cytidylyltransferase) (CDP-DAG synthase) (CDP-DG synthetase) - Sola & (gnl|cdd|36653 : 460.0) no description available & (gnl|cdd|85270 : 172.0) no description available & (reliability: 1108.0) & (original description: Putative CDS3, Description = Phosphatidate cytidylyltransferase 3, PFAM = PF01148)' T '11.3.4' 'lipid metabolism.Phospholipid synthesis.CDP-diacylglycerol-inositol 3-phosphatidyltransferase' 'niben101scf01061_746620-759815' '(at1g68000 : 319.0) phosphatidylinositol synthase 1; phosphatidylinositol synthase 1 (PIS1); CONTAINS InterPro DOMAIN/s: CDP-alcohol phosphatidyltransferase (InterPro:IPR000462), CDP-diacylglycerol-inositol 3-phosphatidyltransferase, eukaryote (InterPro:IPR014387); BEST Arabidopsis thaliana protein match is: probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2 (TAIR:AT4G38570.1); Has 2907 Blast hits to 2907 proteins in 1088 species: Archae - 25; Bacteria - 1785; Metazoa - 167; Fungi - 194; Plants - 81; Viruses - 0; Other Eukaryotes - 655 (source: NCBI BLink). & (gnl|cdd|38450 : 241.0) no description available & (reliability: 638.0) & (original description: Putative PIS1, Description = CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1, PFAM = PF01066)' T '11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'nbv0.5scaffold1314_204773-210604' '(at5g63770 : 389.0) a member of the diacylglycerol kinase gene family. Encodes a functional diacylglycerol kinase. Involved in root elongation and plant development. Gene expression is induced by wounding or cold.; diacylglycerol kinase 2 (DGK2); CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase1 (TAIR:AT5G07920.1); Has 2044 Blast hits to 1731 proteins in 371 species: Archae - 0; Bacteria - 465; Metazoa - 1092; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 238 (source: NCBI BLink). & (gnl|cdd|36384 : 224.0) no description available & (gnl|cdd|47394 : 180.0) no description available & (reliability: 778.0) & (original description: Putative BnaA02g33890D, Description = BnaA02g33890D protein, PFAM = PF00609)' T '11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'nbv0.5scaffold7711_51096-57304' '(at4g21534 : 531.0) Diacylglycerol kinase family protein; FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206); BEST Arabidopsis thaliana protein match is: sphingosine kinase 1 (TAIR:AT4G21540.1). & (gnl|cdd|36332 : 294.0) no description available & (gnl|cdd|31785 : 135.0) no description available & (reliability: 1062.0) & (original description: Putative SPHK1, Description = Sphingosine kinase 1, PFAM = PF00781)' T '11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben044scf00008692ctg000_1-3483' '(at4g30340 : 150.0) encodes a diacylglycerol kinase. Applying a specific diacylglycerol kinase inhibitor to the growth media resulted in reduced root elongation and plant growth. Gene is expressed throughout the plant but is strongest in flowers and young seedlings.; diacylglycerol kinase 7 (DGK7); FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, root development, leaf development; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756), Diacylglycerol kinase, plant (InterPro:IPR016961); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 3 (TAIR:AT2G18730.1); Has 1643 Blast hits to 1452 proteins in 227 species: Archae - 0; Bacteria - 189; Metazoa - 1007; Fungi - 0; Plants - 281; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|36384 : 90.5) no description available & (reliability: 300.0) & (original description: Putative DGK, Description = DAG kinase, PFAM = PF00609)' T '11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben044scf00011051ctg001_17083-23018' '(at5g63770 : 847.0) a member of the diacylglycerol kinase gene family. Encodes a functional diacylglycerol kinase. Involved in root elongation and plant development. Gene expression is induced by wounding or cold.; diacylglycerol kinase 2 (DGK2); CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase1 (TAIR:AT5G07920.1); Has 2044 Blast hits to 1731 proteins in 371 species: Archae - 0; Bacteria - 465; Metazoa - 1092; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 238 (source: NCBI BLink). & (gnl|cdd|36384 : 482.0) no description available & (gnl|cdd|47394 : 173.0) no description available & (reliability: 1694.0) & (original description: Putative DGK2, Description = Diacylglycerol kinase 2, PFAM = PF00781;PF00609;PF00130)' T '11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben044scf00014753ctg006_15222-25389' '(at2g20900 : 577.0) diacylglycerol kinase 5 (DGK5); FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756), Diacylglycerol kinase, plant (InterPro:IPR016961); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 6 (TAIR:AT4G28130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36384 : 324.0) no description available & (gnl|cdd|47394 : 108.0) no description available & (reliability: 1154.0) & (original description: Putative DGK5, Description = Diacylglycerol kinase 5, PFAM = PF00609;PF00609;PF00781)' T '11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben044scf00018163ctg003_7629-16393' '(at2g20900 : 392.0) diacylglycerol kinase 5 (DGK5); FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756), Diacylglycerol kinase, plant (InterPro:IPR016961); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 6 (TAIR:AT4G28130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36384 : 204.0) no description available & (gnl|cdd|47394 : 109.0) no description available & (reliability: 784.0) & (original description: Putative DGK, Description = Diacylglycerol kinase, PFAM = PF00609)' T '11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben101scf01346_146552-154763' '(at5g07920 : 1102.0) diacylglycerol kinase; diacylglycerol kinase1 (DGK1); FUNCTIONS IN: diacylglycerol kinase activity, calcium ion binding; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 2 (TAIR:AT5G63770.1); Has 2279 Blast hits to 1631 proteins in 306 species: Archae - 0; Bacteria - 350; Metazoa - 1446; Fungi - 0; Plants - 254; Viruses - 0; Other Eukaryotes - 229 (source: NCBI BLink). & (gnl|cdd|36384 : 554.0) no description available & (gnl|cdd|47394 : 198.0) no description available & (reliability: 2204.0) & (original description: Putative DGK1, Description = Diacylglycerol kinase 1, PFAM = PF00781;PF00130;PF00609)' T '11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben101scf01409_984056-1001245' '(at4g30340 : 668.0) encodes a diacylglycerol kinase. Applying a specific diacylglycerol kinase inhibitor to the growth media resulted in reduced root elongation and plant growth. Gene is expressed throughout the plant but is strongest in flowers and young seedlings.; diacylglycerol kinase 7 (DGK7); FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, root development, leaf development; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756), Diacylglycerol kinase, plant (InterPro:IPR016961); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 3 (TAIR:AT2G18730.1); Has 1643 Blast hits to 1452 proteins in 227 species: Archae - 0; Bacteria - 189; Metazoa - 1007; Fungi - 0; Plants - 281; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|36384 : 408.0) no description available & (gnl|cdd|47394 : 114.0) no description available & (reliability: 1336.0) & (original description: Putative DGK7, Description = Diacylglycerol kinase 7, PFAM = PF00609;PF00781)' T '11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben101scf01594_387802-397833' '(at5g63770 : 982.0) a member of the diacylglycerol kinase gene family. Encodes a functional diacylglycerol kinase. Involved in root elongation and plant development. Gene expression is induced by wounding or cold.; diacylglycerol kinase 2 (DGK2); CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase1 (TAIR:AT5G07920.1); Has 2044 Blast hits to 1731 proteins in 371 species: Archae - 0; Bacteria - 465; Metazoa - 1092; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 238 (source: NCBI BLink). & (gnl|cdd|36384 : 541.0) no description available & (gnl|cdd|47394 : 204.0) no description available & (reliability: 1964.0) & (original description: Putative DGK2, Description = Diacylglycerol kinase 2, PFAM = PF00781;PF00130;PF00609)' T '11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben101scf01635_234013-250175' '(at4g30340 : 665.0) encodes a diacylglycerol kinase. Applying a specific diacylglycerol kinase inhibitor to the growth media resulted in reduced root elongation and plant growth. Gene is expressed throughout the plant but is strongest in flowers and young seedlings.; diacylglycerol kinase 7 (DGK7); FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, root development, leaf development; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756), Diacylglycerol kinase, plant (InterPro:IPR016961); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 3 (TAIR:AT2G18730.1); Has 1643 Blast hits to 1452 proteins in 227 species: Archae - 0; Bacteria - 189; Metazoa - 1007; Fungi - 0; Plants - 281; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|36384 : 399.0) no description available & (gnl|cdd|47394 : 113.0) no description available & (reliability: 1330.0) & (original description: Putative Os02g0787800, Description = Diacylglycerol kinase, PFAM = PF00781;PF00609)' T '11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben101scf02646_250332-259514' '(at5g07920 : 1077.0) diacylglycerol kinase; diacylglycerol kinase1 (DGK1); FUNCTIONS IN: diacylglycerol kinase activity, calcium ion binding; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 2 (TAIR:AT5G63770.1); Has 2279 Blast hits to 1631 proteins in 306 species: Archae - 0; Bacteria - 350; Metazoa - 1446; Fungi - 0; Plants - 254; Viruses - 0; Other Eukaryotes - 229 (source: NCBI BLink). & (gnl|cdd|36384 : 560.0) no description available & (gnl|cdd|47394 : 203.0) no description available & (reliability: 2154.0) & (original description: Putative DGK1, Description = Diacylglycerol kinase 1, PFAM = PF00609;PF00781;PF00130)' T '11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben101scf02869_459463-471496' '(at2g20900 : 766.0) diacylglycerol kinase 5 (DGK5); FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756), Diacylglycerol kinase, plant (InterPro:IPR016961); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 6 (TAIR:AT4G28130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36384 : 373.0) no description available & (gnl|cdd|47394 : 123.0) no description available & (reliability: 1532.0) & (original description: Putative DGK5, Description = Diacylglycerol kinase 5, PFAM = PF00609;PF00781)' T '11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben101scf05143_80908-93434' '(at4g21540 : 538.0) Encodes a sphingosine kinase, also has enzyme activity towards other plant long-chain sphingoid bases. Involved in guard cell ABA signalling and seed germination.; sphingosine kinase 1 (SPHK1); FUNCTIONS IN: diacylglycerol kinase activity, sphinganine kinase activity, D-erythro-sphingosine kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, seed germination, response to abscisic acid stimulus; LOCATED IN: plant-type vacuole membrane, vacuole; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206); BEST Arabidopsis thaliana protein match is: Diacylglycerol kinase family protein (TAIR:AT4G21534.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36332 : 259.0) no description available & (gnl|cdd|31785 : 116.0) no description available & (reliability: 1066.0) & (original description: Putative SPHK1, Description = Sphingosine kinase 1, PFAM = PF00781)' T '11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben101scf06654_267750-291038' '(at2g20900 : 738.0) diacylglycerol kinase 5 (DGK5); FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756), Diacylglycerol kinase, plant (InterPro:IPR016961); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 6 (TAIR:AT4G28130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36384 : 367.0) no description available & (gnl|cdd|47394 : 122.0) no description available & (reliability: 1476.0) & (original description: Putative DGK1, Description = Diacylglycerol kinase, PFAM = PF00609;PF00781)' T '11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben101scf07069_70775-83765' '(at4g21540 : 588.0) Encodes a sphingosine kinase, also has enzyme activity towards other plant long-chain sphingoid bases. Involved in guard cell ABA signalling and seed germination.; sphingosine kinase 1 (SPHK1); FUNCTIONS IN: diacylglycerol kinase activity, sphinganine kinase activity, D-erythro-sphingosine kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, seed germination, response to abscisic acid stimulus; LOCATED IN: plant-type vacuole membrane, vacuole; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206); BEST Arabidopsis thaliana protein match is: Diacylglycerol kinase family protein (TAIR:AT4G21534.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36332 : 291.0) no description available & (gnl|cdd|31785 : 130.0) no description available & (reliability: 1132.0) & (original description: Putative SPHK1, Description = Sphingosine kinase 1, PFAM = PF00781)' T '11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben101scf08443_26777-38163' '(at2g20900 : 619.0) diacylglycerol kinase 5 (DGK5); FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756), Diacylglycerol kinase, plant (InterPro:IPR016961); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 6 (TAIR:AT4G28130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36384 : 337.0) no description available & (gnl|cdd|47394 : 115.0) no description available & (reliability: 1238.0) & (original description: Putative DGK5, Description = Diacylglycerol kinase 5, PFAM = PF00781;PF00609)' T '11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben101scf08721_138025-144800' '(at5g07920 : 1093.0) diacylglycerol kinase; diacylglycerol kinase1 (DGK1); FUNCTIONS IN: diacylglycerol kinase activity, calcium ion binding; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 2 (TAIR:AT5G63770.1); Has 2279 Blast hits to 1631 proteins in 306 species: Archae - 0; Bacteria - 350; Metazoa - 1446; Fungi - 0; Plants - 254; Viruses - 0; Other Eukaryotes - 229 (source: NCBI BLink). & (gnl|cdd|36384 : 549.0) no description available & (gnl|cdd|47394 : 200.0) no description available & (reliability: 2186.0) & (original description: Putative DGK, Description = Diacylglycerol kinase, PFAM = PF00609;PF00130;PF00781)' T '11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben101scf11806_16591-22922' '(at5g07920 : 1089.0) diacylglycerol kinase; diacylglycerol kinase1 (DGK1); FUNCTIONS IN: diacylglycerol kinase activity, calcium ion binding; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 2 (TAIR:AT5G63770.1); Has 2279 Blast hits to 1631 proteins in 306 species: Archae - 0; Bacteria - 350; Metazoa - 1446; Fungi - 0; Plants - 254; Viruses - 0; Other Eukaryotes - 229 (source: NCBI BLink). & (gnl|cdd|36384 : 559.0) no description available & (gnl|cdd|47394 : 206.0) no description available & (reliability: 2178.0) & (original description: Putative DGK1, Description = Diacylglycerol kinase 1, PFAM = PF00130;PF00781;PF00609)' T '11.3.5' 'lipid metabolism.Phospholipid synthesis.diacylglycerol kinase' 'niben101scf19517_1-17823' '(at4g30340 : 652.0) encodes a diacylglycerol kinase. Applying a specific diacylglycerol kinase inhibitor to the growth media resulted in reduced root elongation and plant growth. Gene is expressed throughout the plant but is strongest in flowers and young seedlings.; diacylglycerol kinase 7 (DGK7); FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, root development, leaf development; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756), Diacylglycerol kinase, plant (InterPro:IPR016961); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 3 (TAIR:AT2G18730.1); Has 1643 Blast hits to 1452 proteins in 227 species: Archae - 0; Bacteria - 189; Metazoa - 1007; Fungi - 0; Plants - 281; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|36384 : 392.0) no description available & (gnl|cdd|47394 : 111.0) no description available & (reliability: 1304.0) & (original description: Putative DGK7, Description = Diacylglycerol kinase 7, PFAM = PF00781;PF00609)' T '11.3.6' 'lipid metabolism.Phospholipid synthesis.choline-phosphate cytidylyltransferase' 'niben101scf01559_97254-102966' '(at2g32260 : 412.0) phosphorylcholine cytidylyltransferase (CCT1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: phosphorylcholine cytidylyltransferase2 (TAIR:AT4G15130.1); Has 2466 Blast hits to 2109 proteins in 632 species: Archae - 27; Bacteria - 791; Metazoa - 538; Fungi - 333; Plants - 250; Viruses - 5; Other Eukaryotes - 522 (source: NCBI BLink). & (gnl|cdd|38015 : 352.0) no description available & (gnl|cdd|28836 : 248.0) no description available & (reliability: 824.0) & (original description: Putative CPCT, Description = Cholinephosphate cytidylyltransferase, PFAM = PF01467)' T '11.3.6' 'lipid metabolism.Phospholipid synthesis.choline-phosphate cytidylyltransferase' 'niben101scf01559_97260-102969' '(at2g32260 : 423.0) phosphorylcholine cytidylyltransferase (CCT1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: phosphorylcholine cytidylyltransferase2 (TAIR:AT4G15130.1); Has 2466 Blast hits to 2109 proteins in 632 species: Archae - 27; Bacteria - 791; Metazoa - 538; Fungi - 333; Plants - 250; Viruses - 5; Other Eukaryotes - 522 (source: NCBI BLink). & (gnl|cdd|38015 : 346.0) no description available & (gnl|cdd|28836 : 243.0) no description available & (reliability: 846.0) & (original description: Putative CCT1, Description = Choline-phosphate cytidylyltransferase 1, PFAM = PF01467)' T '11.3.6' 'lipid metabolism.Phospholipid synthesis.choline-phosphate cytidylyltransferase' 'niben101scf01739_941595-951096' '(at4g15130 : 354.0) phosphorylcholine cytidylyltransferase2 (CCT2); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: phosphorylcholine cytidylyltransferase (TAIR:AT2G32260.1); Has 2568 Blast hits to 2194 proteins in 660 species: Archae - 25; Bacteria - 876; Metazoa - 531; Fungi - 328; Plants - 264; Viruses - 0; Other Eukaryotes - 544 (source: NCBI BLink). & (gnl|cdd|38015 : 337.0) no description available & (gnl|cdd|28836 : 238.0) no description available & (reliability: 708.0) & (original description: Putative CCT, Description = Choline-phosphate cytidylyltransferase B, PFAM = PF01467)' T '11.3.6' 'lipid metabolism.Phospholipid synthesis.choline-phosphate cytidylyltransferase' 'niben101scf03525_70380-79870' '(at4g15130 : 363.0) phosphorylcholine cytidylyltransferase2 (CCT2); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: phosphorylcholine cytidylyltransferase (TAIR:AT2G32260.1); Has 2568 Blast hits to 2194 proteins in 660 species: Archae - 25; Bacteria - 876; Metazoa - 531; Fungi - 328; Plants - 264; Viruses - 0; Other Eukaryotes - 544 (source: NCBI BLink). & (gnl|cdd|38015 : 333.0) no description available & (gnl|cdd|28836 : 238.0) no description available & (reliability: 726.0) & (original description: Putative CCT1, Description = Choline-phosphate cytidylyltransferase 1, PFAM = PF01467)' T '11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'nbv0.3scaffold3358_64132-74928' '(at3g23510 : 1020.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23530.1); Has 15002 Blast hits to 14978 proteins in 1959 species: Archae - 119; Bacteria - 7379; Metazoa - 131; Fungi - 498; Plants - 325; Viruses - 0; Other Eukaryotes - 6550 (source: NCBI BLink). & (gnl|cdd|32411 : 259.0) no description available & (reliability: 2040.0) & (original description: Putative At3g23480, Description = Cyclopropane-fatty-acyl-phospholipid synthase, PFAM = PF02353)' T '11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'nbv0.3scaffold20024_16948-20159' '(at3g23530 : 116.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23510.1); Has 14893 Blast hits to 14869 proteins in 1968 species: Archae - 117; Bacteria - 7289; Metazoa - 156; Fungi - 477; Plants - 317; Viruses - 0; Other Eukaryotes - 6537 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative At3g23510, Description = Cyclopropane-fatty-acyl-phospholipid synthase, PFAM = )' T '11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'nbv0.5scaffold2_141069-175345' '(at3g23510 : 387.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23530.1); Has 15002 Blast hits to 14978 proteins in 1959 species: Archae - 119; Bacteria - 7379; Metazoa - 131; Fungi - 498; Plants - 325; Viruses - 0; Other Eukaryotes - 6550 (source: NCBI BLink). & (gnl|cdd|32411 : 228.0) no description available & (reliability: 774.0) & (original description: Putative cfa, Description = Cyclopropane-fatty-acyl-phospholipid synthase, PFAM = PF02353)' T '11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'nbv0.5scaffold2_272521-296788' '(at3g23530 : 1229.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23510.1); Has 14893 Blast hits to 14869 proteins in 1968 species: Archae - 117; Bacteria - 7289; Metazoa - 156; Fungi - 477; Plants - 317; Viruses - 0; Other Eukaryotes - 6537 (source: NCBI BLink). & (gnl|cdd|32731 : 287.0) no description available & (reliability: 2458.0) & (original description: Putative cfa, Description = Cyclopropane-fatty-acyl-phospholipid synthase, PFAM = PF02353;PF13450)' T '11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'nbv0.5scaffold2_274072-289222' '(at3g23530 : 573.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23510.1); Has 14893 Blast hits to 14869 proteins in 1968 species: Archae - 117; Bacteria - 7289; Metazoa - 156; Fungi - 477; Plants - 317; Viruses - 0; Other Eukaryotes - 6537 (source: NCBI BLink). & (gnl|cdd|32411 : 216.0) no description available & (reliability: 1146.0) & (original description: Putative cfa, Description = Cyclopropane-fatty-acyl-phospholipid synthase, PFAM = PF02353)' T '11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'nbv0.5scaffold5940_44053-97228' '(at3g23510 : 1172.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23530.1); Has 15002 Blast hits to 14978 proteins in 1959 species: Archae - 119; Bacteria - 7379; Metazoa - 131; Fungi - 498; Plants - 325; Viruses - 0; Other Eukaryotes - 6550 (source: NCBI BLink). & (gnl|cdd|32411 : 264.0) no description available & (reliability: 2344.0) & (original description: Putative At3g23470, Description = At3g23470, PFAM = PF13450;PF02353)' T '11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'nbv0.5scaffold5940_53292-56703' '(at3g23530 : 246.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23510.1); Has 14893 Blast hits to 14869 proteins in 1968 species: Archae - 117; Bacteria - 7289; Metazoa - 156; Fungi - 477; Plants - 317; Viruses - 0; Other Eukaryotes - 6537 (source: NCBI BLink). & (gnl|cdd|32731 : 100.0) no description available & (reliability: 492.0) & (original description: Putative At3g23510, Description = Cyclopropane-fatty-acyl-phospholipid synthase, PFAM = )' T '11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'niben044scf00019935ctg003_4539-9262' '(at3g23530 : 474.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23510.1); Has 14893 Blast hits to 14869 proteins in 1968 species: Archae - 117; Bacteria - 7289; Metazoa - 156; Fungi - 477; Plants - 317; Viruses - 0; Other Eukaryotes - 6537 (source: NCBI BLink). & (gnl|cdd|32411 : 224.0) no description available & (reliability: 948.0) & (original description: Putative cfa, Description = Cyclopropane-fatty-acyl-phospholipid synthase, PFAM = PF02353)' T '11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'niben044scf00020771ctg001_13110-17815' '(at3g23510 : 590.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23530.1); Has 15002 Blast hits to 14978 proteins in 1959 species: Archae - 119; Bacteria - 7379; Metazoa - 131; Fungi - 498; Plants - 325; Viruses - 0; Other Eukaryotes - 6550 (source: NCBI BLink). & (gnl|cdd|32731 : 276.0) no description available & (reliability: 1180.0) & (original description: Putative BnaCnng54610D, Description = BnaCnng54610D protein, PFAM = PF01593)' T '11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'niben044scf00020771ctg001_13837-16582' '(at3g23530 : 171.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23510.1); Has 14893 Blast hits to 14869 proteins in 1968 species: Archae - 117; Bacteria - 7289; Metazoa - 156; Fungi - 477; Plants - 317; Viruses - 0; Other Eukaryotes - 6537 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative At3g23510, Description = Cyclopropane-fatty-acyl-phospholipid synthase, PFAM = PF01593)' T '11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'niben101scf00584_20497-48491' '(at3g23530 : 1378.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23510.1); Has 14893 Blast hits to 14869 proteins in 1968 species: Archae - 117; Bacteria - 7289; Metazoa - 156; Fungi - 477; Plants - 317; Viruses - 0; Other Eukaryotes - 6537 (source: NCBI BLink). & (gnl|cdd|32731 : 332.0) no description available & (reliability: 2756.0) & (original description: Putative azo3309, Description = Conserved hypothetical amine oxidoreductase, PFAM = PF01593;PF02353)' T '11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'niben101scf00584_23912-28870' '(at3g23530 : 173.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23510.1); Has 14893 Blast hits to 14869 proteins in 1968 species: Archae - 117; Bacteria - 7289; Metazoa - 156; Fungi - 477; Plants - 317; Viruses - 0; Other Eukaryotes - 6537 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative At3g23510, Description = Cyclopropane fatty acid synthase, PFAM = )' T '11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'niben101scf00584_327476-354012' '(at3g23530 : 1185.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23510.1); Has 14893 Blast hits to 14869 proteins in 1968 species: Archae - 117; Bacteria - 7289; Metazoa - 156; Fungi - 477; Plants - 317; Viruses - 0; Other Eukaryotes - 6537 (source: NCBI BLink). & (gnl|cdd|32731 : 286.0) no description available & (reliability: 2370.0) & (original description: Putative Sb05g026910, Description = Putative uncharacterized protein Sb05g026910, PFAM = PF13450;PF02353;PF02353)' T '11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'niben101scf00584_329027-344374' '(at3g23530 : 557.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23510.1); Has 14893 Blast hits to 14869 proteins in 1968 species: Archae - 117; Bacteria - 7289; Metazoa - 156; Fungi - 477; Plants - 317; Viruses - 0; Other Eukaryotes - 6537 (source: NCBI BLink). & (gnl|cdd|32411 : 178.0) no description available & (reliability: 1114.0) & (original description: Putative At3g23470, Description = Cyclopropane-fatty-acyl-phospholipid synthase, PFAM = PF02353;PF02353)' T '11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'niben101scf00584_329110-346328' '(at3g23510 : 706.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23530.1); Has 15002 Blast hits to 14978 proteins in 1959 species: Archae - 119; Bacteria - 7379; Metazoa - 131; Fungi - 498; Plants - 325; Viruses - 0; Other Eukaryotes - 6550 (source: NCBI BLink). & (gnl|cdd|32731 : 155.0) no description available & (reliability: 1412.0) & (original description: Putative RCOM_1167880, Description = 2-heptaprenyl-1,4-naphthoquinone methyltransferase, putative, PFAM = PF02353;PF02353)' T '11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'niben101scf01219_502520-628151' '(at3g23510 : 386.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23530.1); Has 15002 Blast hits to 14978 proteins in 1959 species: Archae - 119; Bacteria - 7379; Metazoa - 131; Fungi - 498; Plants - 325; Viruses - 0; Other Eukaryotes - 6550 (source: NCBI BLink). & (gnl|cdd|32411 : 212.0) no description available & (reliability: 772.0) & (original description: Putative cfa, Description = Cyclopropane-fatty-acyl-phospholipid synthase, PFAM = PF02353)' T '11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'niben101scf01219_510016-651587' '(at3g23510 : 1219.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23530.1); Has 15002 Blast hits to 14978 proteins in 1959 species: Archae - 119; Bacteria - 7379; Metazoa - 131; Fungi - 498; Plants - 325; Viruses - 0; Other Eukaryotes - 6550 (source: NCBI BLink). & (gnl|cdd|32731 : 262.0) no description available & (reliability: 2438.0) & (original description: Putative At3g23470, Description = Cyclopropane-fatty-acyl-phospholipid synthase, PFAM = PF02353;PF13450)' T '11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'niben101scf01219_635769-639578' '(at3g23530 : 251.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23510.1); Has 14893 Blast hits to 14869 proteins in 1968 species: Archae - 117; Bacteria - 7289; Metazoa - 156; Fungi - 477; Plants - 317; Viruses - 0; Other Eukaryotes - 6537 (source: NCBI BLink). & (gnl|cdd|32731 : 108.0) no description available & (reliability: 502.0) & (original description: Putative At3g23510, Description = Cyclopropane-fatty-acyl-phospholipid synthase, PFAM = )' T '11.3.8' 'lipid metabolism.Phospholipid synthesis.phosphatidylserine decarboxylase' 'nbv0.3scaffold9011_23176-49887' '(at5g57190 : 890.0) Encodes the minor form of the two non-mitochondrail phosphatidylserine decarboxylase. The gene expression level is very low. Located at the tonoplast.; phosphatidylserine decarboxylase 2 (PSD2); FUNCTIONS IN: phosphatidylserine decarboxylase activity; INVOLVED IN: N-terminal protein myristoylation, phospholipid biosynthetic process; LOCATED IN: plant-type vacuole membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), Phosphatidylserine decarboxylase-related (InterPro:IPR003817), Calcium-binding EF-hand (InterPro:IPR002048), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), EF-hand-like domain (InterPro:IPR011992), Phosphatidylserine decarboxylase (InterPro:IPR005221); BEST Arabidopsis thaliana protein match is: phosphatidylserine decarboxylase 3 (TAIR:AT4G25970.1); Has 3739 Blast hits to 3658 proteins in 1335 species: Archae - 3; Bacteria - 2361; Metazoa - 260; Fungi - 489; Plants - 195; Viruses - 0; Other Eukaryotes - 431 (source: NCBI BLink). & (gnl|cdd|37630 : 678.0) no description available & (gnl|cdd|73832 : 246.0) no description available & (reliability: 1780.0) & (original description: Putative PSD2, Description = Phosphatidylserine decarboxylase proenzyme 2, PFAM = PF02666;PF13202;PF00168)' T '11.3.8' 'lipid metabolism.Phospholipid synthesis.phosphatidylserine decarboxylase' 'nbv0.5scaffold4046_87868-115254' '(at5g57190 : 867.0) Encodes the minor form of the two non-mitochondrail phosphatidylserine decarboxylase. The gene expression level is very low. Located at the tonoplast.; phosphatidylserine decarboxylase 2 (PSD2); FUNCTIONS IN: phosphatidylserine decarboxylase activity; INVOLVED IN: N-terminal protein myristoylation, phospholipid biosynthetic process; LOCATED IN: plant-type vacuole membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), Phosphatidylserine decarboxylase-related (InterPro:IPR003817), Calcium-binding EF-hand (InterPro:IPR002048), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), EF-hand-like domain (InterPro:IPR011992), Phosphatidylserine decarboxylase (InterPro:IPR005221); BEST Arabidopsis thaliana protein match is: phosphatidylserine decarboxylase 3 (TAIR:AT4G25970.1); Has 3739 Blast hits to 3658 proteins in 1335 species: Archae - 3; Bacteria - 2361; Metazoa - 260; Fungi - 489; Plants - 195; Viruses - 0; Other Eukaryotes - 431 (source: NCBI BLink). & (gnl|cdd|37630 : 670.0) no description available & (gnl|cdd|73832 : 246.0) no description available & (reliability: 1734.0) & (original description: Putative PSD2, Description = Phosphatidylserine decarboxylase proenzyme 2, PFAM = PF02666;PF13202)' T '11.3.8' 'lipid metabolism.Phospholipid synthesis.phosphatidylserine decarboxylase' 'niben101scf03710_493272-509955' '(at4g16700 : 524.0) Encodes a mitochondrial phosphatidylserine decarboxylase. Expressed mainly in roots and flowers.; phosphatidylserine decarboxylase 1 (PSD1); FUNCTIONS IN: phosphatidylserine decarboxylase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylserine decarboxylase-related (InterPro:IPR003817), Phosphatidylserine decarboxylase (InterPro:IPR005221); Has 2996 Blast hits to 2984 proteins in 1194 species: Archae - 0; Bacteria - 2050; Metazoa - 197; Fungi - 312; Plants - 68; Viruses - 0; Other Eukaryotes - 369 (source: NCBI BLink). & (gnl|cdd|37631 : 338.0) no description available & (gnl|cdd|74500 : 160.0) no description available & (reliability: 1048.0) & (original description: Putative PSD1, Description = Phosphatidylserine decarboxylase proenzyme 1, mitochondrial, PFAM = PF02666)' T '11.3.9' 'lipid metabolism.Phospholipid synthesis.choline monooxygenase' 'nbv0.3scaffold20234_15936-22887' '(at4g29890 : 561.0) choline monooxygenase, putative (CMO-like); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, iron ion binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: oxidation reduction, cellular aromatic compound metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Aromatic-ring-hydroxylating dioxygenase, alpha subunit (InterPro:IPR001663); Has 7402 Blast hits to 7400 proteins in 1015 species: Archae - 31; Bacteria - 4374; Metazoa - 10; Fungi - 153; Plants - 102; Viruses - 0; Other Eukaryotes - 2732 (source: NCBI BLink). & (o04121|chmo_spiol : 449.0) Choline monooxygenase, chloroplast precursor (EC 1.14.15.7) - Spinacia oleracea (Spinach) & (gnl|cdd|58561 : 212.0) no description available & (reliability: 1122.0) & (original description: Putative cmo1, Description = Choline monooxygenase, PFAM = PF00848;PF00355)' T '11.3.9' 'lipid metabolism.Phospholipid synthesis.choline monooxygenase' 'niben101scf04852_38986-52272' '(at4g29890 : 561.0) choline monooxygenase, putative (CMO-like); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, iron ion binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: oxidation reduction, cellular aromatic compound metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Aromatic-ring-hydroxylating dioxygenase, alpha subunit (InterPro:IPR001663); Has 7402 Blast hits to 7400 proteins in 1015 species: Archae - 31; Bacteria - 4374; Metazoa - 10; Fungi - 153; Plants - 102; Viruses - 0; Other Eukaryotes - 2732 (source: NCBI BLink). & (o04121|chmo_spiol : 451.0) Choline monooxygenase, chloroplast precursor (EC 1.14.15.7) - Spinacia oleracea (Spinach) & (gnl|cdd|58561 : 209.0) no description available & (reliability: 1122.0) & (original description: Putative cmo1, Description = Choline monooxygenase, PFAM = PF00355;PF00848)' T '11.3.10' 'lipid metabolism.Phospholipid synthesis.(S)-coclaurine-N-methyltransferase' 'niben101scf04040_704572-709476' '(at4g33110 : 543.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: (S)-coclaurine-N-methyltransferase activity; INVOLVED IN: lipid biosynthetic process; CONTAINS InterPro DOMAIN/s: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G33120.1). & (gnl|cdd|32411 : 206.0) no description available & (reliability: 1086.0) & (original description: Putative cnmt, Description = Coclaurine N-methyltransferase, PFAM = PF02353)' T '11.3.10' 'lipid metabolism.Phospholipid synthesis.(S)-coclaurine-N-methyltransferase' 'niben101scf04040_704949-708583' '(at4g33110 : 378.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: (S)-coclaurine-N-methyltransferase activity; INVOLVED IN: lipid biosynthetic process; CONTAINS InterPro DOMAIN/s: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G33120.1). & (gnl|cdd|32411 : 185.0) no description available & (reliability: 756.0) & (original description: Putative cfa, Description = Cyclopropane-fatty-acyl-phospholipid synthase, PFAM = PF02353)' T '11.4' 'lipid metabolism.TAG synthesis' 'nbv0.3scaffold24011_14297-16755' '(gnl|cdd|65100 : 139.0) no description available & (at5g40420 : 115.0) Encodes oleosin2, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.; oleosin 2 (OLEO2); CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: Oleosin family protein (TAIR:AT3G01570.1); Has 520 Blast hits to 520 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 520; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p29527|oleo6_goshi : 110.0) Oleosin 18.2 kDa - Gossypium hirsutum (Upland cotton) & (reliability: 230.0) & (original description: Putative ole2, Description = Oleosin2, PFAM = PF01277)' T '11.4' 'lipid metabolism.TAG synthesis' 'nbv0.5scaffold1849_28904-52712' '(gnl|cdd|68610 : 249.0) no description available & (at1g70680 : 229.0) Caleosin-related family protein; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: Caleosin-related family protein (TAIR:AT1G70670.1); Has 342 Blast hits to 337 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 281; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative PXG4, Description = Probable peroxygenase 4, PFAM = PF05042)' T '11.4' 'lipid metabolism.TAG synthesis' 'nbv0.5scaffold3164_17232-29057' '(gnl|cdd|68610 : 249.0) no description available & (at1g70680 : 230.0) Caleosin-related family protein; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: Caleosin-related family protein (TAIR:AT1G70670.1); Has 342 Blast hits to 337 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 281; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative PXG5, Description = Probable peroxygenase 5, PFAM = PF05042)' T '11.4' 'lipid metabolism.TAG synthesis' 'nbv0.5scaffold4218_26231-37299' '(at2g19450 : 661.0) Encodes Acyl-CoA:diacylglycerol acyltransferase (DGAT) catalyzes the final step of the triacylglycerol synthesis pathway. An insertion mutation in the TAG1 gene results in altered lipid phenotype. Role in senescence and seed development.; TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1 (TAG1); CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); Has 951 Blast hits to 945 proteins in 279 species: Archae - 0; Bacteria - 104; Metazoa - 315; Fungi - 305; Plants - 83; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (gnl|cdd|35601 : 363.0) no description available & (gnl|cdd|34661 : 164.0) no description available & (reliability: 1322.0) & (original description: Putative a, Description = O-acyltransferase, PFAM = PF03062)' T '11.4' 'lipid metabolism.TAG synthesis' 'nbv0.5scaffold4932_62887-68468' '(gnl|cdd|68610 : 234.0) no description available & (at1g70680 : 194.0) Caleosin-related family protein; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: Caleosin-related family protein (TAIR:AT1G70670.1); Has 342 Blast hits to 337 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 281; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative PXG3, Description = Probable peroxygenase 3, PFAM = PF05042)' T '11.4' 'lipid metabolism.TAG synthesis' 'niben044scf00013327ctg002_8735-17606' '(at2g19450 : 493.0) Encodes Acyl-CoA:diacylglycerol acyltransferase (DGAT) catalyzes the final step of the triacylglycerol synthesis pathway. An insertion mutation in the TAG1 gene results in altered lipid phenotype. Role in senescence and seed development.; TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1 (TAG1); CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); Has 951 Blast hits to 945 proteins in 279 species: Archae - 0; Bacteria - 104; Metazoa - 315; Fungi - 305; Plants - 83; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (gnl|cdd|35601 : 303.0) no description available & (gnl|cdd|34661 : 147.0) no description available & (reliability: 986.0) & (original description: Putative DGAT, Description = Putative diacylglycerol acyltransferase, PFAM = PF03062)' T '11.4' 'lipid metabolism.TAG synthesis' 'niben044scf00020084ctg005_1-2725' '(at2g19450 : 182.0) Encodes Acyl-CoA:diacylglycerol acyltransferase (DGAT) catalyzes the final step of the triacylglycerol synthesis pathway. An insertion mutation in the TAG1 gene results in altered lipid phenotype. Role in senescence and seed development.; TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1 (TAG1); CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); Has 951 Blast hits to 945 proteins in 279 species: Archae - 0; Bacteria - 104; Metazoa - 315; Fungi - 305; Plants - 83; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (gnl|cdd|35601 : 117.0) no description available & (reliability: 364.0) & (original description: Putative a, Description = O-acyltransferase, PFAM = PF03062)' T '11.4' 'lipid metabolism.TAG synthesis' 'niben101scf00163_1989255-1992134' '(gnl|cdd|65100 : 129.0) no description available & (p29110|oleo3_brana : 116.0) Oleosin Bn-III (BnIII) - Brassica napus (Rape) & (at4g25140 : 115.0) Encodes oleosin1, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.; oleosin 1 (OLEO1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to freezing, lipid storage, seed germination, seed oilbody biogenesis; LOCATED IN: monolayer-surrounded lipid storage body, integral to membrane, membrane; EXPRESSED IN: shoot apex; CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: oleosin3 (TAIR:AT5G51210.1); Has 551 Blast hits to 551 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 551; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative c3, Description = Oleosin-like protein, PFAM = PF01277)' T '11.4' 'lipid metabolism.TAG synthesis' 'niben101scf02077_1286993-1289442' '(gnl|cdd|65100 : 135.0) no description available & (p29527|oleo6_goshi : 84.7) Oleosin 18.2 kDa - Gossypium hirsutum (Upland cotton) & (at5g40420 : 83.2) Encodes oleosin2, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.; oleosin 2 (OLEO2); CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: Oleosin family protein (TAIR:AT3G01570.1); Has 520 Blast hits to 520 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 520; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative ole2, Description = Oleosin2, PFAM = PF01277)' T '11.4' 'lipid metabolism.TAG synthesis' 'niben101scf02217_271606-274025' '(at2g25890 : 95.5) Oleosin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid storage; LOCATED IN: monolayer-surrounded lipid storage body, integral to membrane, membrane; EXPRESSED IN: petal, leaf whorl, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: oleosin3 (TAIR:AT5G51210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|65100 : 92.6) no description available & (p29110|oleo3_brana : 85.9) Oleosin Bn-III (BnIII) - Brassica napus (Rape) & (reliability: 191.0) & (original description: Putative ole1, Description = Oleosin1, PFAM = PF01277)' T '11.4' 'lipid metabolism.TAG synthesis' 'niben101scf02376_50603-69192' '(gnl|cdd|68610 : 238.0) no description available & (at1g70670 : 216.0) Caleosin-related family protein; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: Caleosin-related family protein (TAIR:AT1G70680.1); Has 341 Blast hits to 336 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 60; Plants - 278; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative PXG4, Description = Probable peroxygenase 4, PFAM = PF05042)' T '11.4' 'lipid metabolism.TAG synthesis' 'niben101scf02585_36344-40008' '(at3g01570 : 139.0) Oleosin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid storage; LOCATED IN: monolayer-surrounded lipid storage body, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: oleosin 2 (TAIR:AT5G40420.1); Has 516 Blast hits to 516 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 516; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|65100 : 136.0) no description available & (p29527|oleo6_goshi : 115.0) Oleosin 18.2 kDa - Gossypium hirsutum (Upland cotton) & (reliability: 278.0) & (original description: Putative ole2, Description = Oleosin, PFAM = PF01277)' T '11.4' 'lipid metabolism.TAG synthesis' 'niben101scf02786_431986-434489' '(at3g18570 : 120.0) Oleosin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid storage; LOCATED IN: monolayer-surrounded lipid storage body, integral to membrane, membrane; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: Oleosin family protein (TAIR:AT1G48990.1); Has 346 Blast hits to 346 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 346; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|65100 : 92.6) no description available & (reliability: 240.0) & (original description: Putative Sb09g029350, Description = Putative uncharacterized protein Sb09g029350, PFAM = PF01277)' T '11.4' 'lipid metabolism.TAG synthesis' 'niben101scf02790_82311-93615' '(at2g19450 : 639.0) Encodes Acyl-CoA:diacylglycerol acyltransferase (DGAT) catalyzes the final step of the triacylglycerol synthesis pathway. An insertion mutation in the TAG1 gene results in altered lipid phenotype. Role in senescence and seed development.; TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1 (TAG1); CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); Has 951 Blast hits to 945 proteins in 279 species: Archae - 0; Bacteria - 104; Metazoa - 315; Fungi - 305; Plants - 83; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (gnl|cdd|35601 : 343.0) no description available & (gnl|cdd|34661 : 145.0) no description available & (reliability: 1278.0) & (original description: Putative DGAT1, Description = O-acyltransferase, PFAM = PF03062)' T '11.4' 'lipid metabolism.TAG synthesis' 'niben101scf04328_191384-194583' '(gnl|cdd|65100 : 136.0) no description available & (at3g01570 : 110.0) Oleosin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid storage; LOCATED IN: monolayer-surrounded lipid storage body, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: oleosin 2 (TAIR:AT5G40420.1); Has 516 Blast hits to 516 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 516; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p29528|oleo7_goshi : 99.8) Oleosin 16.4 kDa - Gossypium hirsutum (Upland cotton) & (reliability: 220.0) & (original description: Putative ole2, Description = Oleosin, PFAM = PF01277)' T '11.4' 'lipid metabolism.TAG synthesis' 'niben101scf06078_481619-483988' '(gnl|cdd|65100 : 121.0) no description available & (q42980|oleo1_orysa : 99.0) Oleosin 16 kDa (OSE701) - Oryza sativa (Rice) & (at4g25140 : 90.1) Encodes oleosin1, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.; oleosin 1 (OLEO1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to freezing, lipid storage, seed germination, seed oilbody biogenesis; LOCATED IN: monolayer-surrounded lipid storage body, integral to membrane, membrane; EXPRESSED IN: shoot apex; CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: oleosin3 (TAIR:AT5G51210.1); Has 551 Blast hits to 551 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 551; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative oleI, Description = Oleosin, PFAM = PF01277)' T '11.4' 'lipid metabolism.TAG synthesis' 'niben101scf08293_164196-166633' '(gnl|cdd|65100 : 136.0) no description available & (p29110|oleo3_brana : 131.0) Oleosin Bn-III (BnIII) - Brassica napus (Rape) & (at4g25140 : 129.0) Encodes oleosin1, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.; oleosin 1 (OLEO1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to freezing, lipid storage, seed germination, seed oilbody biogenesis; LOCATED IN: monolayer-surrounded lipid storage body, integral to membrane, membrane; EXPRESSED IN: shoot apex; CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: oleosin3 (TAIR:AT5G51210.1); Has 551 Blast hits to 551 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 551; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative c3, Description = Oleosin-like protein, PFAM = PF01277)' T '11.4' 'lipid metabolism.TAG synthesis' 'niben101scf08368_571714-640609' '(gnl|cdd|68610 : 250.0) no description available & (at1g70680 : 230.0) Caleosin-related family protein; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: Caleosin-related family protein (TAIR:AT1G70670.1); Has 342 Blast hits to 337 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 281; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative PXG5, Description = Probable peroxygenase 5, PFAM = PF05042)' T '11.4' 'lipid metabolism.TAG synthesis' 'niben101scf08368_617692-663536' '(gnl|cdd|68610 : 249.0) no description available & (at1g70680 : 230.0) Caleosin-related family protein; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: Caleosin-related family protein (TAIR:AT1G70670.1); Has 342 Blast hits to 337 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 281; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative PXG5, Description = Probable peroxygenase 5, PFAM = PF05042)' T '11.4' 'lipid metabolism.TAG synthesis' 'niben101scf09317_243634-246035' '(gnl|cdd|65100 : 121.0) no description available & (p29110|oleo3_brana : 92.0) Oleosin Bn-III (BnIII) - Brassica napus (Rape) & (at4g25140 : 90.5) Encodes oleosin1, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.; oleosin 1 (OLEO1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to freezing, lipid storage, seed germination, seed oilbody biogenesis; LOCATED IN: monolayer-surrounded lipid storage body, integral to membrane, membrane; EXPRESSED IN: shoot apex; CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: oleosin3 (TAIR:AT5G51210.1); Has 551 Blast hits to 551 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 551; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative c3, Description = Oleosin, PFAM = PF01277)' T '11.4' 'lipid metabolism.TAG synthesis' 'niben101scf11744_141088-143552' '(gnl|cdd|65100 : 139.0) no description available & (at5g40420 : 123.0) Encodes oleosin2, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.; oleosin 2 (OLEO2); CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: Oleosin family protein (TAIR:AT3G01570.1); Has 520 Blast hits to 520 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 520; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p29527|oleo6_goshi : 119.0) Oleosin 18.2 kDa - Gossypium hirsutum (Upland cotton) & (reliability: 246.0) & (original description: Putative ole2, Description = Oleosin2, PFAM = PF01277)' T '11.4' 'lipid metabolism.TAG synthesis' 'niben101scf16152_46154-62543' '(at2g19450 : 667.0) Encodes Acyl-CoA:diacylglycerol acyltransferase (DGAT) catalyzes the final step of the triacylglycerol synthesis pathway. An insertion mutation in the TAG1 gene results in altered lipid phenotype. Role in senescence and seed development.; TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1 (TAG1); CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); Has 951 Blast hits to 945 proteins in 279 species: Archae - 0; Bacteria - 104; Metazoa - 315; Fungi - 305; Plants - 83; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (gnl|cdd|35601 : 341.0) no description available & (gnl|cdd|34661 : 140.0) no description available & (reliability: 1334.0) & (original description: Putative a, Description = O-acyltransferase, PFAM = PF03062)' T '11.5' 'lipid metabolism.glyceral metabolism' '' '' '11.5.1' 'lipid metabolism.glyceral metabolism.glycerol kinase' 'nbv0.5scaffold2971_178242-183383' '(at1g80460 : 832.0) Encodes a protein similar to glycerol kinase, which converts glycerol to glycerol 3-phosphate and performs a rate-limiting step in glycerol metabolism. This gene is required for both general and specific resistance against bacteria and fungi. Arabidopsis thaliana glycerol kinase (GLR1) mRNA.Involved in flagellin-induced non-host resistance to Pseudomonas. Coronatine partially suppresses flagellin-induced expression of NHO1.; nonhost resistance to P. s. phaseolicola 1 (NHO1); CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY, conserved site (InterPro:IPR018483), Glycerol kinase (InterPro:IPR005999), Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80472 : 671.0) no description available & (gnl|cdd|37728 : 537.0) no description available & (reliability: 1664.0) & (original description: Putative GLPK, Description = Glycerol kinase, PFAM = PF02782;PF00370)' T '11.5.1' 'lipid metabolism.glyceral metabolism.glycerol kinase' 'niben044scf00032663ctg000_16404-21640' '(at1g80460 : 837.0) Encodes a protein similar to glycerol kinase, which converts glycerol to glycerol 3-phosphate and performs a rate-limiting step in glycerol metabolism. This gene is required for both general and specific resistance against bacteria and fungi. Arabidopsis thaliana glycerol kinase (GLR1) mRNA.Involved in flagellin-induced non-host resistance to Pseudomonas. Coronatine partially suppresses flagellin-induced expression of NHO1.; nonhost resistance to P. s. phaseolicola 1 (NHO1); CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY, conserved site (InterPro:IPR018483), Glycerol kinase (InterPro:IPR005999), Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80472 : 671.0) no description available & (gnl|cdd|37728 : 538.0) no description available & (reliability: 1674.0) & (original description: Putative GLPK, Description = Glycerol kinase, PFAM = PF02782;PF00370)' T '11.5.1' 'lipid metabolism.glyceral metabolism.glycerol kinase' 'niben044scf00057619ctg001_8929-12317' '(at1g80460 : 386.0) Encodes a protein similar to glycerol kinase, which converts glycerol to glycerol 3-phosphate and performs a rate-limiting step in glycerol metabolism. This gene is required for both general and specific resistance against bacteria and fungi. Arabidopsis thaliana glycerol kinase (GLR1) mRNA.Involved in flagellin-induced non-host resistance to Pseudomonas. Coronatine partially suppresses flagellin-induced expression of NHO1.; nonhost resistance to P. s. phaseolicola 1 (NHO1); CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY, conserved site (InterPro:IPR018483), Glycerol kinase (InterPro:IPR005999), Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80472 : 335.0) no description available & (gnl|cdd|37728 : 259.0) no description available & (reliability: 772.0) & (original description: Putative gk, Description = ATP:glycerol 3-phosphotransferase, PFAM = PF02782)' T '11.5.2' 'lipid metabolism.glyceral metabolism.Glycerol-3-phosphate dehydrogenase (NAD+)' 'nbv0.3scaffold69145_1-4293' '(at5g40610 : 598.0) NAD-dependent glycerol-3-phosphate dehydrogenase family protein; FUNCTIONS IN: in 9 functions; INVOLVED IN: oxidation reduction, glycerol-3-phosphate metabolic process, glycerol-3-phosphate catabolic process, carbohydrate metabolic process, metabolic process; LOCATED IN: chloroplast, glycerol-3-phosphate dehydrogenase complex, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal (InterPro:IPR011128), NAD-dependent glycerol-3-phosphate dehydrogenase (InterPro:IPR006168), NAD-dependent glycerol-3-phosphate dehydrogenase, eukaryotic (InterPro:IPR017751), NAD(P)-binding domain (InterPro:IPR016040), NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal (InterPro:IPR006109); BEST Arabidopsis thaliana protein match is: NAD-dependent glycerol-3-phosphate dehydrogenase family protein (TAIR:AT2G40690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37922 : 475.0) no description available & (gnl|cdd|30589 : 283.0) no description available & (reliability: 1196.0) & (original description: Putative GPDH, Description = Glycerol-3-phosphate dehydrogenase [NAD(+)], PFAM = PF07479;PF01210)' T '11.5.2' 'lipid metabolism.glyceral metabolism.Glycerol-3-phosphate dehydrogenase (NAD+)' 'niben044scf00004562ctg003_3475-8453' '(at2g41540 : 809.0) Encodes a protein with NAD-dependent glycerol-3-phosphate (G3P) dehydrogenase which was shown to complement an Escherichia coli strain: BB20-14, auxotrophic for glycerol/G3P due to a loss-of-function mutation in the gpsA gene.; GPDHC1; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal (InterPro:IPR006109), NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal (InterPro:IPR011128), NAD-dependent glycerol-3-phosphate dehydrogenase (InterPro:IPR006168); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT3G07690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37922 : 348.0) no description available & (gnl|cdd|30589 : 113.0) no description available & (reliability: 1618.0) & (original description: Putative Os01g0939600, Description = Probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic, PFAM = PF07479;PF01210)' T '11.5.2' 'lipid metabolism.glyceral metabolism.Glycerol-3-phosphate dehydrogenase (NAD+)' 'niben101scf01612_235050-252101' '(at2g41540 : 770.0) Encodes a protein with NAD-dependent glycerol-3-phosphate (G3P) dehydrogenase which was shown to complement an Escherichia coli strain: BB20-14, auxotrophic for glycerol/G3P due to a loss-of-function mutation in the gpsA gene.; GPDHC1; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal (InterPro:IPR006109), NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal (InterPro:IPR011128), NAD-dependent glycerol-3-phosphate dehydrogenase (InterPro:IPR006168); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT3G07690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37922 : 347.0) no description available & (gnl|cdd|30589 : 114.0) no description available & (reliability: 1540.0) & (original description: Putative Os01g0939600, Description = Probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic, PFAM = PF01210;PF07479)' T '11.5.2' 'lipid metabolism.glyceral metabolism.Glycerol-3-phosphate dehydrogenase (NAD+)' 'niben101scf11084_209066-215498' '(at2g41540 : 812.0) Encodes a protein with NAD-dependent glycerol-3-phosphate (G3P) dehydrogenase which was shown to complement an Escherichia coli strain: BB20-14, auxotrophic for glycerol/G3P due to a loss-of-function mutation in the gpsA gene.; GPDHC1; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal (InterPro:IPR006109), NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal (InterPro:IPR011128), NAD-dependent glycerol-3-phosphate dehydrogenase (InterPro:IPR006168); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT3G07690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37922 : 351.0) no description available & (gnl|cdd|30589 : 112.0) no description available & (reliability: 1624.0) & (original description: Putative Os01g0939600, Description = Probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic, PFAM = PF01210;PF07479)' T '11.5.2' 'lipid metabolism.glyceral metabolism.Glycerol-3-phosphate dehydrogenase (NAD+)' 'niben101scf14436_60240-66976' '(at2g40690 : 608.0) Encodes a putative dihydroxyacetone phosphate (DHAP) reductase involved in glycerol-3-phosphate supply within the chloroplast for synthesis of glycerolipids. Mutants have reduced levels of hexadecatrienoic acid, which is rescued by exogenous glycerol-3-phosphate. This gene appears to be involved in the flux of fatty acids in the prokaryotic glyerolipid biosynthesis pathway.; GLY1; FUNCTIONS IN: glycerol-3-phosphate dehydrogenase [NAD+] activity; INVOLVED IN: systemic acquired resistance, glycerol-3-phosphate metabolic process, glycerolipid biosynthetic process, glycerolipid metabolic process; LOCATED IN: glycerol-3-phosphate dehydrogenase complex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal (InterPro:IPR006109), NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal (InterPro:IPR011128), NAD-dependent glycerol-3-phosphate dehydrogenase (InterPro:IPR006168); BEST Arabidopsis thaliana protein match is: NAD-dependent glycerol-3-phosphate dehydrogenase family protein (TAIR:AT5G40610.1); Has 8663 Blast hits to 8662 proteins in 2795 species: Archae - 24; Bacteria - 5277; Metazoa - 643; Fungi - 297; Plants - 161; Viruses - 0; Other Eukaryotes - 2261 (source: NCBI BLink). & (gnl|cdd|80508 : 352.0) no description available & (gnl|cdd|37922 : 320.0) no description available & (reliability: 1216.0) & (original description: Putative GLY1, Description = Glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic, PFAM = PF01210;PF07479)' T '11.5.3' 'lipid metabolism.glyceral metabolism.FAD-dependent glycerol-3-phosphate dehydrogenase' 'niben044scf00015876ctg007_5691-8158' '(gnl|cdd|35265 : 106.0) no description available & (at3g10370 : 105.0) mitochondrial FAD-dependent glycerol-3-phosphate dehydrogenase. possibly involved in storage lipid catabolism and glycerol assimilation, and in glycerol-3-phosphate shuttle which transports reducing power from cytosol to mitochondrion.; SUGAR-DEPENDENT 6 (SDP6); FUNCTIONS IN: glycerol-3-phosphate dehydrogenase activity; INVOLVED IN: glycerophosphate shuttle, glycerol metabolic process, glycerol catabolic process; LOCATED IN: mitochondrion, mitochondrial inner membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076), FAD-dependent glycerol-3-phosphate dehydrogenase (InterPro:IPR000447); Has 7040 Blast hits to 7029 proteins in 1867 species: Archae - 83; Bacteria - 4925; Metazoa - 247; Fungi - 177; Plants - 55; Viruses - 0; Other Eukaryotes - 1553 (source: NCBI BLink). & (gnl|cdd|30923 : 87.3) no description available & (reliability: 210.0) & (original description: Putative glpA, Description = Glycerol-3-phosphate dehydrogenase, PFAM = PF01266)' T '11.5.3' 'lipid metabolism.glyceral metabolism.FAD-dependent glycerol-3-phosphate dehydrogenase' 'niben101scf03252_386785-404208' '(at3g10370 : 1001.0) mitochondrial FAD-dependent glycerol-3-phosphate dehydrogenase. possibly involved in storage lipid catabolism and glycerol assimilation, and in glycerol-3-phosphate shuttle which transports reducing power from cytosol to mitochondrion.; SUGAR-DEPENDENT 6 (SDP6); FUNCTIONS IN: glycerol-3-phosphate dehydrogenase activity; INVOLVED IN: glycerophosphate shuttle, glycerol metabolic process, glycerol catabolic process; LOCATED IN: mitochondrion, mitochondrial inner membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076), FAD-dependent glycerol-3-phosphate dehydrogenase (InterPro:IPR000447); Has 7040 Blast hits to 7029 proteins in 1867 species: Archae - 83; Bacteria - 4925; Metazoa - 247; Fungi - 177; Plants - 55; Viruses - 0; Other Eukaryotes - 1553 (source: NCBI BLink). & (gnl|cdd|35265 : 730.0) no description available & (gnl|cdd|30923 : 434.0) no description available & (reliability: 2002.0) & (original description: Putative SDP6, Description = Glycerol-3-phosphate dehydrogenase SDP6, mitochondrial, PFAM = PF01266;PF16901)' T '11.5.1001' 'lipid metabolism.glyceral metabolism' '1-monohexadecanoglycerol' '' M '11.5.1002' 'lipid metabolism.glyceral metabolism' '1-monooctodecanoglycerol' '' M '11.6' 'lipid metabolism.lipid transfer proteins etc' 'nbv0.3scaffold426_110256-115332' '(at1g27950 : 132.0) Encodes LTPG1, a lipid transfer protein with a predicted GPI (glycosylphosphatidylinositol)-anchor domain. Localized in the plasma membrane. Disruption of the LTPG1 gene causes alterations of cuticular lipid composition, but no significant changes on total wax and cutin monomer loads are seen.; glycosylphosphatidylinositol-anchored lipid protein transfer 1 (LTPG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid transport; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 597 Blast hits to 593 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 597; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative LTPG1, Description = Non-specific lipid transfer protein GPI-anchored 1, PFAM = PF14368)' T '11.6' 'lipid metabolism.lipid transfer proteins etc' 'nbv0.3scaffold20600_26087-31130' '(at1g64720 : 466.0) membrane related protein CP5; CP5; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT5G54170.1); Has 365 Blast hits to 364 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 181; Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|37972 : 257.0) no description available & (gnl|cdd|29139 : 116.0) no description available & (reliability: 932.0) & (original description: Putative CP5, Description = Polyketide cyclase/dehydrase and lipid transport superfamily protein, PFAM = PF01852)' T '11.6' 'lipid metabolism.lipid transfer proteins etc' 'nbv0.3scaffold28265_11640-15954' '(at1g21360 : 193.0) glycolipid transfer protein 2 (GLTP2); FUNCTIONS IN: glycolipid transporter activity, glycolipid binding; INVOLVED IN: glycolipid transport; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: Glycolipid transfer protein (GLTP) family protein (TAIR:AT3G21260.3); Has 509 Blast hits to 509 proteins in 154 species: Archae - 0; Bacteria - 0; Metazoa - 240; Fungi - 112; Plants - 114; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|38431 : 157.0) no description available & (gnl|cdd|87613 : 148.0) no description available & (reliability: 386.0) & (original description: Putative GLTP3, Description = Glycolipid transfer protein 3, PFAM = PF08718)' T '11.6' 'lipid metabolism.lipid transfer proteins etc' 'nbv0.5scaffold2342_194370-199769' '(at1g27950 : 132.0) Encodes LTPG1, a lipid transfer protein with a predicted GPI (glycosylphosphatidylinositol)-anchor domain. Localized in the plasma membrane. Disruption of the LTPG1 gene causes alterations of cuticular lipid composition, but no significant changes on total wax and cutin monomer loads are seen.; glycosylphosphatidylinositol-anchored lipid protein transfer 1 (LTPG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid transport; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 597 Blast hits to 593 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 597; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative Ltp2, Description = Lipid transfer protein, PFAM = PF14368)' T '11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben044scf00005988ctg011_10996-14650' '(q42952|nltp1_tobac : 151.0) Nonspecific lipid-transfer protein 1 precursor (LTP 1) (Pathogenesis-related protein 14) (PR-14) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|72939 : 99.6) no description available & (at3g51590 : 87.4) Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The LTP12 promoter is active exclusively in the tapetum during the uninucleate microspore and bicellular pollen stages. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; lipid transfer protein 12 (LTP12); FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plant-type cell wall; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: D pollen mother cell meiosis stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 3 (TAIR:AT5G59320.1); Has 1073 Blast hits to 1072 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1069; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative LTP1, Description = Non-specific lipid-transfer protein 1, PFAM = PF00234)' T '11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben044scf00013910ctg003_174-3383' '(at2g44300 : 107.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative MTR_3g083760, Description = Lipid transfer protein, PFAM = PF14368)' T '11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben044scf00049536ctg000_20512-26217' '(at2g33470 : 323.0) glycolipid transfer protein 1 (GLTP1); FUNCTIONS IN: glycolipid transporter activity, glycolipid binding; INVOLVED IN: glycolipid transport; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: Glycolipid transfer protein (GLTP) family protein (TAIR:AT3G21260.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38431 : 213.0) no description available & (gnl|cdd|87613 : 200.0) no description available & (reliability: 646.0) & (original description: Putative GLTP1, Description = Glycolipid transfer protein 1, PFAM = PF08718)' T '11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf00103_51922-54749' '(q9m5x7|nltp_maldo : 107.0) Nonspecific lipid-transfer protein precursor (LTP) (Allergen Mal d 3) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|72939 : 106.0) no description available & (at3g08770 : 99.0) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; lipid transfer protein 6 (LTP6); FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G01870.1). & (reliability: 198.0) & (original description: Putative ltp, Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T '11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf00225_598443-603244' '(at1g64720 : 457.0) membrane related protein CP5; CP5; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT5G54170.1); Has 365 Blast hits to 364 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 181; Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|37972 : 258.0) no description available & (gnl|cdd|29139 : 118.0) no description available & (reliability: 914.0) & (original description: Putative At5g54170, Description = Lipid-binding START domain-containing protein, PFAM = PF01852)' T '11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf00367_206019-209567' '(at2g33470 : 314.0) glycolipid transfer protein 1 (GLTP1); FUNCTIONS IN: glycolipid transporter activity, glycolipid binding; INVOLVED IN: glycolipid transport; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: Glycolipid transfer protein (GLTP) family protein (TAIR:AT3G21260.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38431 : 215.0) no description available & (gnl|cdd|87613 : 186.0) no description available & (reliability: 628.0) & (original description: Putative GLTP1, Description = Glycolipid transfer protein 1, PFAM = PF08718)' T '11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf00541_626057-630371' '(at1g21360 : 195.0) glycolipid transfer protein 2 (GLTP2); FUNCTIONS IN: glycolipid transporter activity, glycolipid binding; INVOLVED IN: glycolipid transport; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: Glycolipid transfer protein (GLTP) family protein (TAIR:AT3G21260.3); Has 509 Blast hits to 509 proteins in 154 species: Archae - 0; Bacteria - 0; Metazoa - 240; Fungi - 112; Plants - 114; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|38431 : 157.0) no description available & (gnl|cdd|87613 : 148.0) no description available & (reliability: 374.0) & (original description: Putative GLTP3, Description = Glycolipid transfer protein 3, PFAM = PF08718)' T '11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf00944_756107-761486' '(at2g33470 : 323.0) glycolipid transfer protein 1 (GLTP1); FUNCTIONS IN: glycolipid transporter activity, glycolipid binding; INVOLVED IN: glycolipid transport; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: Glycolipid transfer protein (GLTP) family protein (TAIR:AT3G21260.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38431 : 214.0) no description available & (gnl|cdd|87613 : 200.0) no description available & (reliability: 646.0) & (original description: Putative GLTP1, Description = Glycolipid transfer protein 1, PFAM = PF08718)' T '11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf02006_160160-163973' '(at2g44300 : 153.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative T4.9, Description = T4.9 protein, PFAM = PF14368)' T '11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf03101_10910-14287' '(at2g44300 : 107.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative Os07g0198300, Description = Lipid binding protein, putative, PFAM = PF14368)' T '11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf03293_41250-44093' '(at2g44300 : 127.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative AtXYP10, Description = Lipid binding protein, putative, PFAM = PF14368)' T '11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf03864_26363-31406' '(at1g64720 : 468.0) membrane related protein CP5; CP5; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT5G54170.1); Has 365 Blast hits to 364 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 181; Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|37972 : 257.0) no description available & (gnl|cdd|29139 : 116.0) no description available & (reliability: 936.0) & (original description: Putative CP5, Description = Polyketide cyclase/dehydrase and lipid transport superfamily protein, PFAM = PF01852)' T '11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf04556_448226-451482' '(at2g44300 : 176.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative YLS3, Description = Protein YLS3, PFAM = PF14368)' T '11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf04600_119698-122066' '(gnl|cdd|72939 : 102.0) no description available & (q9m5x7|nltp_maldo : 96.3) Nonspecific lipid-transfer protein precursor (LTP) (Allergen Mal d 3) - Malus domestica (Apple) (Malus sylvestris) & (at5g59320 : 85.5) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; lipid transfer protein 3 (LTP3); FUNCTIONS IN: lipid binding; INVOLVED IN: response to water deprivation, response to abscisic acid stimulus; LOCATED IN: cell wall, apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 4 (TAIR:AT5G59310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative ltp, Description = Non-specific lipid-transfer protein, PFAM = PF14368)' T '11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf07080_348157-352631' '(at1g27950 : 130.0) Encodes LTPG1, a lipid transfer protein with a predicted GPI (glycosylphosphatidylinositol)-anchor domain. Localized in the plasma membrane. Disruption of the LTPG1 gene causes alterations of cuticular lipid composition, but no significant changes on total wax and cutin monomer loads are seen.; glycosylphosphatidylinositol-anchored lipid protein transfer 1 (LTPG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid transport; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 597 Blast hits to 593 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 597; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative Ltp2, Description = GPI-anchored protein, PFAM = PF14368)' T '11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf07590_629560-634263' '(at1g64720 : 456.0) membrane related protein CP5; CP5; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT5G54170.1); Has 365 Blast hits to 364 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 181; Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|37972 : 256.0) no description available & (gnl|cdd|29139 : 111.0) no description available & (reliability: 912.0) & (original description: Putative CP5, Description = Polyketide cyclase/dehydrase and lipid transport superfamily protein, PFAM = PF01852)' T '11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf08679_211150-214988' '(at2g44300 : 156.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative T4.9, Description = T4.9 protein, PFAM = PF14368)' T '11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf11497_378748-383561' '(at2g44300 : 133.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative YLS3, Description = Putative GPI-anchored protein At1g27950 family, PFAM = PF14368)' T '11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf13203_1295-4015' '(gnl|cdd|72939 : 99.6) no description available & (p27631|nltp_dauca : 95.1) Nonspecific lipid-transfer protein precursor (LTP) (Extracellular protein 2) - Daucus carota (Carrot) & (at3g08770 : 88.6) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; lipid transfer protein 6 (LTP6); FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G01870.1). & (reliability: 177.2) & (original description: Putative ltp, Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T '11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf15342_10154-12498' '(q42952|nltp1_tobac : 94.4) Nonspecific lipid-transfer protein 1 precursor (LTP 1) (Pathogenesis-related protein 14) (PR-14) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|72939 : 93.4) no description available & (at2g38540 : 88.2) Non-specific lipid transfer protein. Binds calmodulin in a Ca2+-independent manner. Localized to the cell wall. Specifically expressed in L1 epidermal layer. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; lipid transfer protein 1 (LP1); FUNCTIONS IN: calmodulin binding; INVOLVED IN: lipid transport; LOCATED IN: apoplast, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 2 (TAIR:AT2G38530.1); Has 1149 Blast hits to 1148 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1145; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative ltp2, Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T '11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf20768_109288-115041' '(at3g21260 : 154.0) Glycolipid transfer protein (GLTP) family protein; FUNCTIONS IN: glycolipid transporter activity, glycolipid binding; INVOLVED IN: glycolipid transport; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: glycolipid transfer protein 2 (TAIR:AT1G21360.1); Has 501 Blast hits to 501 proteins in 155 species: Archae - 0; Bacteria - 0; Metazoa - 232; Fungi - 110; Plants - 118; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|87613 : 124.0) no description available & (gnl|cdd|38431 : 118.0) no description available & (reliability: 308.0) & (original description: Putative GLTP2, Description = Glycolipid transfer protein (GLTP) family protein, PFAM = PF08718)' T '11.6' 'lipid metabolism.lipid transfer proteins etc' 'niben101scf29144_71016-73870' '(gnl|cdd|72939 : 101.0) no description available & (q42762|nltp1_goshi : 95.9) Nonspecific lipid-transfer protein precursor (LTP) - Gossypium hirsutum (Upland cotton) & (at5g59310 : 90.5) Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The mRNA is present in flowers and siliques, and is strongly up-regulated by abscisic acid. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; lipid transfer protein 4 (LTP4); FUNCTIONS IN: lipid binding; INVOLVED IN: response to water deprivation, response to abscisic acid stimulus, lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 3 (TAIR:AT5G59320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative ltp, Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T '11.7' 'lipid metabolism.unassigned' 'nbv0.3scaffold15105_477-38985' '(at1g54570 : 811.0) Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41130.1); Has 651 Blast hits to 637 proteins in 188 species: Archae - 0; Bacteria - 283; Metazoa - 139; Fungi - 19; Plants - 149; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 1622.0) & (original description: Putative At1g54570, Description = Acyltransferase-like protein At1g54570, chloroplastic, PFAM = PF12146;PF03982)' T '11.7' 'lipid metabolism.unassigned' 'nbv0.3scaffold32627_13000-21744' '(at3g02030 : 423.0) transferases, transferring acyl groups other than amino-acyl groups;acyltransferases; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acyltransferase activity; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41130.1); Has 598 Blast hits to 587 proteins in 168 species: Archae - 0; Bacteria - 374; Metazoa - 27; Fungi - 2; Plants - 145; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 798.0) & (original description: Putative At1g54570, Description = Esterase/lipase/thioesterase family protein, PFAM = PF12146;PF03982)' T '11.7' 'lipid metabolism.unassigned' 'nbv0.3scaffold72851_1347-8207' '(at1g01020 : 200.0) ARV1; CONTAINS InterPro DOMAIN/s: Arv1-like protein (InterPro:IPR007290); BEST Arabidopsis thaliana protein match is: Arv1-like protein (TAIR:AT4G01510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38344 : 133.0) no description available & (gnl|cdd|67761 : 133.0) no description available & (reliability: 370.0) & (original description: Putative ARV1, Description = ARV1, PFAM = PF04161)' T '11.7' 'lipid metabolism.unassigned' 'nbv0.5scaffold1127_158489-163969' '(at1g54570 : 274.0) Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41130.1); Has 651 Blast hits to 637 proteins in 188 species: Archae - 0; Bacteria - 283; Metazoa - 139; Fungi - 19; Plants - 149; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 548.0) & (original description: Putative At1g54570, Description = Esterase/lipase/thioesterase family protein, PFAM = PF12146)' T '11.7' 'lipid metabolism.unassigned' 'niben044scf00000631ctg003_470-7680' '(at1g54570 : 340.0) Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41130.1); Has 651 Blast hits to 637 proteins in 188 species: Archae - 0; Bacteria - 283; Metazoa - 139; Fungi - 19; Plants - 149; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 680.0) & (original description: Putative At1g54570, Description = Esterase/lipase/thioesterase family protein, PFAM = PF12146)' T '11.7' 'lipid metabolism.unassigned' 'niben044scf00031787ctg006_8931-11923' '(at1g54570 : 230.0) Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41130.1); Has 651 Blast hits to 637 proteins in 188 species: Archae - 0; Bacteria - 283; Metazoa - 139; Fungi - 19; Plants - 149; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative At1g54570, Description = Esterase/lipase/thioesterase family protein, PFAM = )' T '11.7' 'lipid metabolism.unassigned' 'niben044scf00031787ctg009_961-8940' '(at1g54570 : 182.0) Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41130.1); Has 651 Blast hits to 637 proteins in 188 species: Archae - 0; Bacteria - 283; Metazoa - 139; Fungi - 19; Plants - 149; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative At1g54570, Description = Esterase/lipase/thioesterase family protein, PFAM = )' T '11.7' 'lipid metabolism.unassigned' 'niben101scf00109_212200-227863' '(at5g41130 : 700.0) Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41120.1). & (reliability: 1286.0) & (original description: Putative At3g26840, Description = Acyltransferase-like protein At3g26840, chloroplastic, PFAM = PF12146;PF03982)' T '11.7' 'lipid metabolism.unassigned' 'niben101scf04396_283621-290359' '(at1g54570 : 372.0) Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41130.1); Has 651 Blast hits to 637 proteins in 188 species: Archae - 0; Bacteria - 283; Metazoa - 139; Fungi - 19; Plants - 149; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 744.0) & (original description: Putative At1g54570, Description = Esterase/lipase/thioesterase family protein, PFAM = PF12146)' T '11.7' 'lipid metabolism.unassigned' 'niben101scf09234_268937-276075' '(at1g54570 : 414.0) Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41130.1); Has 651 Blast hits to 637 proteins in 188 species: Archae - 0; Bacteria - 283; Metazoa - 139; Fungi - 19; Plants - 149; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 828.0) & (original description: Putative At1g54570, Description = Esterase/lipase/thioesterase family protein, PFAM = PF03982)' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'nbv0.3scaffold4297_12701-15500' '(at5g42890 : 175.0) sterol carrier protein 2 (SCP2); FUNCTIONS IN: oxidoreductase activity, sterol binding; INVOLVED IN: glyoxylate metabolic process, intracellular lipid transport, fatty acid beta-oxidation, seed germination; LOCATED IN: peroxisome; EXPRESSED IN: 32 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: SCP2 sterol-binding domain (InterPro:IPR003033), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39372 : 109.0) no description available & (reliability: 350.0) & (original description: Putative SCP2, Description = Putative uncharacterized protein At5g42890, PFAM = PF02036)' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'nbv0.3scaffold20471_307-3498' '(gnl|cdd|36797 : 274.0) no description available & (at1g74100 : 266.0) encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with different desulfoglucosinolates, the best substrate is indole-3-methyl-dsGS, followed by benzyl-dsGS. Expression was induced by wounding, jasmonate and ethylene stimulates.; sulfotransferase 16 (SOT16); FUNCTIONS IN: sulfotransferase activity, desulfoglucosinolate sulfotransferase activity; INVOLVED IN: glucosinolate biosynthetic process, response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 17 (TAIR:AT1G18590.1); Has 2855 Blast hits to 2817 proteins in 179 species: Archae - 0; Bacteria - 199; Metazoa - 1686; Fungi - 0; Plants - 534; Viruses - 0; Other Eukaryotes - 436 (source: NCBI BLink). & (gnl|cdd|84950 : 185.0) no description available & (reliability: 490.0) & (original description: Putative SOT6, Description = Cytosolic sulfotransferase 6, PFAM = PF00685)' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'nbv0.3scaffold72071_1128-7562' '(at1g76150 : 275.0) Encodes a monofunctional enoyl-CoA hydratase 2, involved in the degradation of even cis-unsaturated fatty acids, gene expression is enhanced during the first 2 days of germination, as well as in senescent leaves.; enoyl-CoA hydratase 2 (ECH2); FUNCTIONS IN: oxidoreductase activity, 3R-hydroxyacyl-CoA dehydratase activity; INVOLVED IN: fatty acid beta-oxidation, unsaturated, even number, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MaoC-like dehydratase (InterPro:IPR002539), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); Has 2242 Blast hits to 2242 proteins in 541 species: Archae - 23; Bacteria - 1245; Metazoa - 172; Fungi - 395; Plants - 47; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink). & (gnl|cdd|48043 : 163.0) no description available & (gnl|cdd|36420 : 142.0) no description available & (reliability: 550.0) & (original description: Putative ECH2, Description = Enoyl-CoA hydratase 2, peroxisomal, PFAM = PF01575)' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'nbv0.3scaffold84757_196-5257' '(at4g27270 : 314.0) Quinone reductase family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: negative regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Flavoprotein WrbA (InterPro:IPR010089), NADPH-dependent FMN reductase (InterPro:IPR005025), Flavodoxin/nitric oxide synthase (InterPro:IPR008254); BEST Arabidopsis thaliana protein match is: flavodoxin-like quinone reductase 1 (TAIR:AT5G54500.1); Has 3487 Blast hits to 3484 proteins in 1099 species: Archae - 83; Bacteria - 2629; Metazoa - 2; Fungi - 274; Plants - 205; Viruses - 1; Other Eukaryotes - 293 (source: NCBI BLink). & (gnl|cdd|38345 : 292.0) no description available & (gnl|cdd|81206 : 220.0) no description available & (reliability: 628.0) & (original description: Putative BQR, Description = Benzoquinone reductase, PFAM = PF03358)' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'nbv0.5scaffold50_1143475-1157317' '(at1g10030 : 155.0) homolog of yeast ergosterol28 (ERG28); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Erg28-like (InterPro:IPR005352); Has 223 Blast hits to 223 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 67; Fungi - 94; Plants - 48; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|86401 : 118.0) no description available & (gnl|cdd|38665 : 109.0) no description available & (reliability: 310.0) & (original description: Putative At1g10030, Description = Ergosterol biosynthetic protein 28, PFAM = PF03694)' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'nbv0.5scaffold5023_148741-154571' '(at4g27270 : 299.0) Quinone reductase family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: negative regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Flavoprotein WrbA (InterPro:IPR010089), NADPH-dependent FMN reductase (InterPro:IPR005025), Flavodoxin/nitric oxide synthase (InterPro:IPR008254); BEST Arabidopsis thaliana protein match is: flavodoxin-like quinone reductase 1 (TAIR:AT5G54500.1); Has 3487 Blast hits to 3484 proteins in 1099 species: Archae - 83; Bacteria - 2629; Metazoa - 2; Fungi - 274; Plants - 205; Viruses - 1; Other Eukaryotes - 293 (source: NCBI BLink). & (gnl|cdd|38345 : 297.0) no description available & (gnl|cdd|81206 : 225.0) no description available & (reliability: 598.0) & (original description: Putative qor, Description = Flavoprotein wrbA, PFAM = PF03358)' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben044scf00003561ctg015_1-1437' '(at5g07010 : 100.0) Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).; sulfotransferase 2A (ST2A); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 2B (TAIR:AT5G07000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative ST2A, Description = Sulfotransferase, PFAM = PF00685)' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben044scf00012398ctg002_3453-9887' '(at1g76150 : 374.0) Encodes a monofunctional enoyl-CoA hydratase 2, involved in the degradation of even cis-unsaturated fatty acids, gene expression is enhanced during the first 2 days of germination, as well as in senescent leaves.; enoyl-CoA hydratase 2 (ECH2); FUNCTIONS IN: oxidoreductase activity, 3R-hydroxyacyl-CoA dehydratase activity; INVOLVED IN: fatty acid beta-oxidation, unsaturated, even number, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MaoC-like dehydratase (InterPro:IPR002539), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); Has 2242 Blast hits to 2242 proteins in 541 species: Archae - 23; Bacteria - 1245; Metazoa - 172; Fungi - 395; Plants - 47; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink). & (gnl|cdd|36420 : 193.0) no description available & (gnl|cdd|48043 : 163.0) no description available & (reliability: 748.0) & (original description: Putative ECH2, Description = Enoyl-CoA hydratase 2, peroxisomal, PFAM = PF01575)' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben044scf00015098ctg006_19173-23433' '(at4g27270 : 314.0) Quinone reductase family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: negative regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Flavoprotein WrbA (InterPro:IPR010089), NADPH-dependent FMN reductase (InterPro:IPR005025), Flavodoxin/nitric oxide synthase (InterPro:IPR008254); BEST Arabidopsis thaliana protein match is: flavodoxin-like quinone reductase 1 (TAIR:AT5G54500.1); Has 3487 Blast hits to 3484 proteins in 1099 species: Archae - 83; Bacteria - 2629; Metazoa - 2; Fungi - 274; Plants - 205; Viruses - 1; Other Eukaryotes - 293 (source: NCBI BLink). & (gnl|cdd|38345 : 292.0) no description available & (gnl|cdd|81206 : 224.0) no description available & (reliability: 628.0) & (original description: Putative qor, Description = Flavoprotein wrbA, PFAM = PF03358)' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben044scf00022117ctg014_1-1761' '(at1g76150 : 149.0) Encodes a monofunctional enoyl-CoA hydratase 2, involved in the degradation of even cis-unsaturated fatty acids, gene expression is enhanced during the first 2 days of germination, as well as in senescent leaves.; enoyl-CoA hydratase 2 (ECH2); FUNCTIONS IN: oxidoreductase activity, 3R-hydroxyacyl-CoA dehydratase activity; INVOLVED IN: fatty acid beta-oxidation, unsaturated, even number, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MaoC-like dehydratase (InterPro:IPR002539), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); Has 2242 Blast hits to 2242 proteins in 541 species: Archae - 23; Bacteria - 1245; Metazoa - 172; Fungi - 395; Plants - 47; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative ECH2, Description = Enoyl-CoA hydratase 2, peroxisomal, PFAM = PF01575)' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben044scf00040712ctg000_174-6470' '(at5g58800 : 318.0) Quinone reductase family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: negative regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Flavoprotein WrbA (InterPro:IPR010089), NADPH-dependent FMN reductase (InterPro:IPR005025), Flavodoxin/nitric oxide synthase (InterPro:IPR008254); BEST Arabidopsis thaliana protein match is: Quinone reductase family protein (TAIR:AT4G27270.1); Has 3250 Blast hits to 3250 proteins in 1056 species: Archae - 62; Bacteria - 2436; Metazoa - 2; Fungi - 274; Plants - 202; Viruses - 1; Other Eukaryotes - 273 (source: NCBI BLink). & (gnl|cdd|38345 : 290.0) no description available & (gnl|cdd|81206 : 204.0) no description available & (reliability: 636.0) & (original description: Putative qor, Description = Flavoprotein wrbA, PFAM = PF03358)' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben044scf00046540ctg002_1-1452' '(at4g36750 : 115.0) Quinone reductase family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: negative regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Flavoprotein WrbA (InterPro:IPR010089), Flavodoxin/nitric oxide synthase (InterPro:IPR008254); BEST Arabidopsis thaliana protein match is: flavodoxin-like quinone reductase 1 (TAIR:AT5G54500.1); Has 3509 Blast hits to 3505 proteins in 1117 species: Archae - 64; Bacteria - 2674; Metazoa - 2; Fungi - 274; Plants - 203; Viruses - 1; Other Eukaryotes - 291 (source: NCBI BLink). & (gnl|cdd|38345 : 96.5) no description available & (reliability: 230.0) & (original description: Putative qor, Description = Flavoprotein wrbA, PFAM = )' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf00090_752573-755604' '(at5g42890 : 176.0) sterol carrier protein 2 (SCP2); FUNCTIONS IN: oxidoreductase activity, sterol binding; INVOLVED IN: glyoxylate metabolic process, intracellular lipid transport, fatty acid beta-oxidation, seed germination; LOCATED IN: peroxisome; EXPRESSED IN: 32 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: SCP2 sterol-binding domain (InterPro:IPR003033), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39372 : 109.0) no description available & (reliability: 352.0) & (original description: Putative SCP2, Description = Putative uncharacterized protein At5g42890, PFAM = PF02036)' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf00163_1968387-1971367' '(gnl|cdd|36797 : 270.0) no description available & (at1g13420 : 243.0) Encodes a sulfotransferase. Unlike the related ST4A protein (At2g14920), in vitro experiements show that this enzyme does not act brassinosteroids. ST4B is expressed in the roots and transcript levels rise in response to cytokinin treatment.; sulfotransferase 4B (ST4B); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 4A (TAIR:AT2G14920.1); Has 2771 Blast hits to 2728 proteins in 191 species: Archae - 0; Bacteria - 215; Metazoa - 1679; Fungi - 1; Plants - 543; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|84950 : 200.0) no description available & (reliability: 486.0) & (original description: Putative SOT8, Description = Cytosolic sulfotransferase 8, PFAM = PF00685)' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf00637_369607-372629' '(gnl|cdd|36797 : 329.0) no description available & (at5g07010 : 325.0) Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).; sulfotransferase 2A (ST2A); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 2B (TAIR:AT5G07000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84950 : 217.0) no description available & (reliability: 650.0) & (original description: Putative SOT15, Description = Cytosolic sulfotransferase 15, PFAM = PF00685)' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf00783_628131-632501' '(gnl|cdd|36797 : 268.0) no description available & (at3g45070 : 223.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: sulfotransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G45080.1); Has 2794 Blast hits to 2750 proteins in 189 species: Archae - 0; Bacteria - 202; Metazoa - 1707; Fungi - 1; Plants - 542; Viruses - 0; Other Eukaryotes - 342 (source: NCBI BLink). & (gnl|cdd|84950 : 197.0) no description available & (reliability: 446.0) & (original description: Putative ST1, Description = Sulfotransferase, PFAM = PF00685)' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf02375_252401-258927' '(at1g10030 : 155.0) homolog of yeast ergosterol28 (ERG28); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Erg28-like (InterPro:IPR005352); Has 223 Blast hits to 223 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 67; Fungi - 94; Plants - 48; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|86401 : 119.0) no description available & (gnl|cdd|38665 : 110.0) no description available & (reliability: 310.0) & (original description: Putative At1g10030, Description = Ergosterol biosynthetic protein 28, PFAM = PF03694)' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf02440_16023-20495' '(at4g27270 : 315.0) Quinone reductase family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: negative regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Flavoprotein WrbA (InterPro:IPR010089), NADPH-dependent FMN reductase (InterPro:IPR005025), Flavodoxin/nitric oxide synthase (InterPro:IPR008254); BEST Arabidopsis thaliana protein match is: flavodoxin-like quinone reductase 1 (TAIR:AT5G54500.1); Has 3487 Blast hits to 3484 proteins in 1099 species: Archae - 83; Bacteria - 2629; Metazoa - 2; Fungi - 274; Plants - 205; Viruses - 1; Other Eukaryotes - 293 (source: NCBI BLink). & (gnl|cdd|38345 : 294.0) no description available & (gnl|cdd|81206 : 220.0) no description available & (reliability: 630.0) & (original description: Putative FQR1, Description = NAD(P)H dehydrogenase (quinone) FQR1, PFAM = PF03358)' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf03015_53244-60651' '(at4g36750 : 311.0) Quinone reductase family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: negative regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Flavoprotein WrbA (InterPro:IPR010089), Flavodoxin/nitric oxide synthase (InterPro:IPR008254); BEST Arabidopsis thaliana protein match is: flavodoxin-like quinone reductase 1 (TAIR:AT5G54500.1); Has 3509 Blast hits to 3505 proteins in 1117 species: Archae - 64; Bacteria - 2674; Metazoa - 2; Fungi - 274; Plants - 203; Viruses - 1; Other Eukaryotes - 291 (source: NCBI BLink). & (gnl|cdd|38345 : 263.0) no description available & (gnl|cdd|81206 : 200.0) no description available & (reliability: 622.0) & (original description: Putative qor, Description = Flavoprotein wrbA, PFAM = PF03358)' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf03045_342816-345751' '(gnl|cdd|36797 : 258.0) no description available & (at5g07010 : 210.0) Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).; sulfotransferase 2A (ST2A); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 2B (TAIR:AT5G07000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84950 : 190.0) no description available & (reliability: 420.0) & (original description: Putative PGSC0003DMG400039363, Description = Sulfotransferase, PFAM = PF00685)' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf04231_297861-300898' '(gnl|cdd|36797 : 284.0) no description available & (at5g07010 : 266.0) Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).; sulfotransferase 2A (ST2A); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 2B (TAIR:AT5G07000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84950 : 209.0) no description available & (reliability: 532.0) & (original description: Putative SOT5, Description = Sulfotransferase, PFAM = PF00685)' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf04231_335748-343576' '(gnl|cdd|36797 : 285.0) no description available & (at1g18590 : 280.0) encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with preference with methionine-derived desulfoglucosinolates.; sulfotransferase 17 (SOT17); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: desulfo-glucosinolate sulfotransferase 18 (TAIR:AT1G74090.1); Has 2933 Blast hits to 2889 proteins in 198 species: Archae - 0; Bacteria - 241; Metazoa - 1692; Fungi - 1; Plants - 541; Viruses - 0; Other Eukaryotes - 458 (source: NCBI BLink). & (gnl|cdd|84950 : 209.0) no description available & (reliability: 530.0) & (original description: Putative SOT17, Description = Cytosolic sulfotransferase 17, PFAM = PF00685)' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf04240_51321-58064' '(at4g36750 : 315.0) Quinone reductase family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: negative regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Flavoprotein WrbA (InterPro:IPR010089), Flavodoxin/nitric oxide synthase (InterPro:IPR008254); BEST Arabidopsis thaliana protein match is: flavodoxin-like quinone reductase 1 (TAIR:AT5G54500.1); Has 3509 Blast hits to 3505 proteins in 1117 species: Archae - 64; Bacteria - 2674; Metazoa - 2; Fungi - 274; Plants - 203; Viruses - 1; Other Eukaryotes - 291 (source: NCBI BLink). & (gnl|cdd|38345 : 279.0) no description available & (gnl|cdd|81206 : 208.0) no description available & (reliability: 630.0) & (original description: Putative qor, Description = Flavoprotein wrbA, PFAM = PF03358)' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf04438_213311-216315' '(gnl|cdd|36797 : 353.0) no description available & (at2g03760 : 328.0) Encodes a brassinosteroid sulfotransferase. In vitro experiements show that this enzyme has a preference for 24-epibrassinosteroids, particularly 24-epicathasterone, but does not act on castasterone and brassinolide. It is differentially expressed during development, being more abundant in young seedlings and actively growing cell cultures. Expression is induced in response to salicylic acid and methyl jasmonate and bacterial pathogens.; sulphotransferase 12 (SOT12); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G03770.1); Has 2910 Blast hits to 2872 proteins in 198 species: Archae - 0; Bacteria - 232; Metazoa - 1693; Fungi - 1; Plants - 543; Viruses - 0; Other Eukaryotes - 441 (source: NCBI BLink). & (gnl|cdd|84950 : 231.0) no description available & (reliability: 648.0) & (original description: Putative SOT15, Description = Cytosolic sulfotransferase 15, PFAM = PF00685)' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf05385_224888-231322' '(at1g76150 : 358.0) Encodes a monofunctional enoyl-CoA hydratase 2, involved in the degradation of even cis-unsaturated fatty acids, gene expression is enhanced during the first 2 days of germination, as well as in senescent leaves.; enoyl-CoA hydratase 2 (ECH2); FUNCTIONS IN: oxidoreductase activity, 3R-hydroxyacyl-CoA dehydratase activity; INVOLVED IN: fatty acid beta-oxidation, unsaturated, even number, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MaoC-like dehydratase (InterPro:IPR002539), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); Has 2242 Blast hits to 2242 proteins in 541 species: Archae - 23; Bacteria - 1245; Metazoa - 172; Fungi - 395; Plants - 47; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink). & (gnl|cdd|36420 : 192.0) no description available & (gnl|cdd|48043 : 163.0) no description available & (reliability: 716.0) & (original description: Putative ECH2, Description = Enoyl-CoA hydratase 2, peroxisomal, PFAM = PF01575)' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf06112_216341-223149' '(at4g36750 : 317.0) Quinone reductase family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: negative regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Flavoprotein WrbA (InterPro:IPR010089), Flavodoxin/nitric oxide synthase (InterPro:IPR008254); BEST Arabidopsis thaliana protein match is: flavodoxin-like quinone reductase 1 (TAIR:AT5G54500.1); Has 3509 Blast hits to 3505 proteins in 1117 species: Archae - 64; Bacteria - 2674; Metazoa - 2; Fungi - 274; Plants - 203; Viruses - 1; Other Eukaryotes - 291 (source: NCBI BLink). & (gnl|cdd|38345 : 277.0) no description available & (gnl|cdd|81206 : 207.0) no description available & (reliability: 634.0) & (original description: Putative qor, Description = Flavoprotein wrbA, PFAM = PF03358)' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf21257_32350-38211' '(at4g36750 : 311.0) Quinone reductase family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: negative regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Flavoprotein WrbA (InterPro:IPR010089), Flavodoxin/nitric oxide synthase (InterPro:IPR008254); BEST Arabidopsis thaliana protein match is: flavodoxin-like quinone reductase 1 (TAIR:AT5G54500.1); Has 3509 Blast hits to 3505 proteins in 1117 species: Archae - 64; Bacteria - 2674; Metazoa - 2; Fungi - 274; Plants - 203; Viruses - 1; Other Eukaryotes - 291 (source: NCBI BLink). & (gnl|cdd|38345 : 285.0) no description available & (gnl|cdd|81206 : 215.0) no description available & (reliability: 622.0) & (original description: Putative qor, Description = Flavoprotein wrbA, PFAM = PF03358)' T '11.8' 'lipid metabolism.'exotics'(steroids, squalene etc)' 'niben101scf24053_19310-22308' '(at2g03760 : 342.0) Encodes a brassinosteroid sulfotransferase. In vitro experiements show that this enzyme has a preference for 24-epibrassinosteroids, particularly 24-epicathasterone, but does not act on castasterone and brassinolide. It is differentially expressed during development, being more abundant in young seedlings and actively growing cell cultures. Expression is induced in response to salicylic acid and methyl jasmonate and bacterial pathogens.; sulphotransferase 12 (SOT12); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G03770.1); Has 2910 Blast hits to 2872 proteins in 198 species: Archae - 0; Bacteria - 232; Metazoa - 1693; Fungi - 1; Plants - 543; Viruses - 0; Other Eukaryotes - 441 (source: NCBI BLink). & (gnl|cdd|36797 : 337.0) no description available & (gnl|cdd|84950 : 223.0) no description available & (reliability: 668.0) & (original description: Putative SOT12, Description = Cytosolic sulfotransferase 12, PFAM = PF00685)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'nbv0.3scaffold10503_42144-48313' '(at3g58490 : 478.0) Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: sphingosine-1-phosphate phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); Has 1069 Blast hits to 1069 proteins in 384 species: Archae - 10; Bacteria - 625; Metazoa - 135; Fungi - 136; Plants - 31; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|38033 : 264.0) no description available & (gnl|cdd|48092 : 127.0) no description available & (reliability: 956.0) & (original description: Putative LPPD, Description = Lipid phosphate phosphatase delta, PFAM = PF01569)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'nbv0.3scaffold25858_1-7617' '(at1g13580 : 284.0) LAG1 longevity assurance homolog 3 (LAG13); CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G25540.1). & (q6eun0|ascl1_orysa : 261.0) ASC1-like protein 1 (Alternaria stem canker resistance-like protein 1) - Oryza sativa (Rice) & (gnl|cdd|86441 : 179.0) no description available & (gnl|cdd|36820 : 176.0) no description available & (reliability: 568.0) & (original description: Putative Os09g0372700, Description = Os09g0372700 protein, PFAM = PF03798)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'nbv0.3scaffold40666_13556-16872' '(at2g46210 : 652.0) Fatty acid/sphingolipid desaturase; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water, iron ion binding, heme binding; INVOLVED IN: oxidation reduction, fatty acid biosynthetic process, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1 (InterPro:IPR005804), Fatty acid/sphingolipid desaturase (InterPro:IPR012171), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: Fatty acid/sphingolipid desaturase (TAIR:AT3G61580.1); Has 5941 Blast hits to 5850 proteins in 906 species: Archae - 2; Bacteria - 1188; Metazoa - 1112; Fungi - 1689; Plants - 939; Viruses - 2; Other Eukaryotes - 1009 (source: NCBI BLink). & (gnl|cdd|39433 : 395.0) no description available & (gnl|cdd|58172 : 177.0) no description available & (reliability: 1304.0) & (original description: Putative sld1, Description = Delta(8)-fatty-acid desaturase, PFAM = PF00487;PF00173)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'nbv0.3scaffold72851_1347-8207' '(at1g01020 : 200.0) ARV1; CONTAINS InterPro DOMAIN/s: Arv1-like protein (InterPro:IPR007290); BEST Arabidopsis thaliana protein match is: Arv1-like protein (TAIR:AT4G01510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38344 : 133.0) no description available & (gnl|cdd|67761 : 133.0) no description available & (reliability: 400.0) & (original description: Putative ARV1, Description = ARV1, PFAM = PF04161)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'nbv0.5scaffold44_193869-203229' '(at1g27980 : 842.0) dihydrosphingosine phosphate lyase (DPL1); FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity; INVOLVED IN: sphingolipid catabolic process, cellular amino acid metabolic process; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase (TAIR:AT5G17330.1); Has 6215 Blast hits to 6205 proteins in 1686 species: Archae - 244; Bacteria - 4383; Metazoa - 292; Fungi - 491; Plants - 296; Viruses - 3; Other Eukaryotes - 506 (source: NCBI BLink). & (q52rg7|sgpl_orysa : 789.0) Sphingosine-1-phosphate lyase precursor (EC 4.1.2.27) (SP-lyase) (SPL) (Sphingosine-1-phosphate aldolase) - Oryza sativa (Rice) & (gnl|cdd|36597 : 516.0) no description available & (gnl|cdd|30425 : 253.0) no description available & (reliability: 1684.0) & (original description: Putative DPL1, Description = Sphingosine-1-phosphate lyase, PFAM = PF00282)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'nbv0.5scaffold4331_121301-130067' '(at3g06470 : 225.0) GNS1/SUR4 membrane protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GNS1/SUR4 membrane protein (InterPro:IPR002076); BEST Arabidopsis thaliana protein match is: GNS1/SUR4 membrane protein family (TAIR:AT3G06460.1); Has 2217 Blast hits to 2209 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 1418; Fungi - 362; Plants - 108; Viruses - 14; Other Eukaryotes - 315 (source: NCBI BLink). & (gnl|cdd|38281 : 142.0) no description available & (gnl|cdd|85273 : 97.0) no description available & (reliability: 450.0) & (original description: Putative KCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF01151)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'nbv0.5scaffold4748_119314-121854' '(q6eun0|ascl1_orysa : 181.0) ASC1-like protein 1 (Alternaria stem canker resistance-like protein 1) - Oryza sativa (Rice) & (at1g13580 : 179.0) LAG1 longevity assurance homolog 3 (LAG13); CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G25540.1). & (gnl|cdd|36820 : 101.0) no description available & (reliability: 358.0) & (original description: Putative LAG1, Description = ASC1-like protein 1, PFAM = PF03798)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'nbv0.5scaffold7711_51096-57304' '(at4g21534 : 531.0) Diacylglycerol kinase family protein; FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206); BEST Arabidopsis thaliana protein match is: sphingosine kinase 1 (TAIR:AT4G21540.1). & (gnl|cdd|36332 : 294.0) no description available & (gnl|cdd|31785 : 135.0) no description available & (reliability: 1052.0) & (original description: Putative SPHK1, Description = Sphingosine kinase 1, PFAM = PF00781)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben044scf00000016ctg013_23315-29592' '(at1g69640 : 372.0) Encodes one of the two redundant sphingoid base hydroxylases (SBH). Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Double mutants of SBHs were dwarfed and not able to progress from vegetative to reproductive growth.; sphingoid base hydroxylase 1 (SBH1); CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sphingoid base hydroxylase 2 (TAIR:AT1G14290.1); Has 2400 Blast hits to 2339 proteins in 395 species: Archae - 0; Bacteria - 406; Metazoa - 416; Fungi - 708; Plants - 429; Viruses - 3; Other Eukaryotes - 438 (source: NCBI BLink). & (gnl|cdd|36092 : 367.0) no description available & (gnl|cdd|32818 : 103.0) no description available & (reliability: 744.0) & (original description: Putative SBH2, Description = Sphinganine C4-monooxygenase 2, PFAM = PF04116)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben044scf00001096ctg000_13002-16735' '(at2g46210 : 653.0) Fatty acid/sphingolipid desaturase; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water, iron ion binding, heme binding; INVOLVED IN: oxidation reduction, fatty acid biosynthetic process, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1 (InterPro:IPR005804), Fatty acid/sphingolipid desaturase (InterPro:IPR012171), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: Fatty acid/sphingolipid desaturase (TAIR:AT3G61580.1); Has 5941 Blast hits to 5850 proteins in 906 species: Archae - 2; Bacteria - 1188; Metazoa - 1112; Fungi - 1689; Plants - 939; Viruses - 2; Other Eukaryotes - 1009 (source: NCBI BLink). & (gnl|cdd|39433 : 391.0) no description available & (gnl|cdd|58172 : 192.0) no description available & (reliability: 1306.0) & (original description: Putative sld1, Description = Delta-8 sphingolipid desaturase, PFAM = PF00487;PF00173)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben044scf00004752ctg003_920-7466' '(at3g19260 : 340.0) LAG1 homolog . Loss of function mutant is sensitive to AAL-toxin. LOH2 is presumed to function in sphingolipid metabolism.; LAG1 homologue 2 (LOH2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to molecule of fungal origin; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: LAG1 longevity assurance homolog 3 (TAIR:AT1G13580.3); Has 1277 Blast hits to 1277 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 612; Fungi - 306; Plants - 183; Viruses - 3; Other Eukaryotes - 173 (source: NCBI BLink). & (q84qc0|ascl3_orysa : 311.0) ASC1-like protein 3 (Alternaria stem canker resistance-like protein 3) - Oryza sativa (Rice) & (gnl|cdd|36820 : 223.0) no description available & (gnl|cdd|86441 : 208.0) no description available & (reliability: 680.0) & (original description: Putative LAG2, Description = LAG1 longevity assurance homolog 2, PFAM = PF03798)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben044scf00005291ctg004_1878-8221' '(at4g22330 : 399.0) Encodes AtCES1 for Acyl-CoA independent ceramide synthase.; ATCES1; FUNCTIONS IN: catalytic activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: ceramide metabolic process; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ceramidase (InterPro:IPR008901); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69404 : 212.0) no description available & (gnl|cdd|37540 : 187.0) no description available & (reliability: 798.0) & (original description: Putative ATCES1, Description = Alkaline ceramidase 3, PFAM = PF05875)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben044scf00009823ctg002_2434-7131' '(at1g13580 : 214.0) LAG1 longevity assurance homolog 3 (LAG13); CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G25540.1). & (q6eun0|ascl1_orysa : 188.0) ASC1-like protein 1 (Alternaria stem canker resistance-like protein 1) - Oryza sativa (Rice) & (gnl|cdd|36820 : 131.0) no description available & (gnl|cdd|86441 : 129.0) no description available & (reliability: 428.0) & (original description: Putative Os09g0372700, Description = Os09g0372700 protein, PFAM = PF03798)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben044scf00010763ctg010_9109-14680' '(at3g06060 : 410.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G19200.1); Has 110611 Blast hits to 110370 proteins in 3576 species: Archae - 917; Bacteria - 74698; Metazoa - 5725; Fungi - 6415; Plants - 2635; Viruses - 0; Other Eukaryotes - 20221 (source: NCBI BLink). & (gnl|cdd|36424 : 318.0) no description available & (gnl|cdd|30648 : 156.0) no description available & (reliability: 820.0) & (original description: Putative TSC10B, Description = 3-dehydrosphinganine reductase TSC10B, PFAM = PF00106)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben044scf00010763ctg010_9139-14693' '(at3g06060 : 412.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G19200.1); Has 110611 Blast hits to 110370 proteins in 3576 species: Archae - 917; Bacteria - 74698; Metazoa - 5725; Fungi - 6415; Plants - 2635; Viruses - 0; Other Eukaryotes - 20221 (source: NCBI BLink). & (gnl|cdd|36424 : 319.0) no description available & (gnl|cdd|30648 : 157.0) no description available & (reliability: 824.0) & (original description: Putative TSC10B, Description = 3-dehydrosphinganine reductase TSC10B, PFAM = PF00106)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben044scf00015043ctg013_2287-5145' '(q6eun0|ascl1_orysa : 190.0) ASC1-like protein 1 (Alternaria stem canker resistance-like protein 1) - Oryza sativa (Rice) & (at1g13580 : 188.0) LAG1 longevity assurance homolog 3 (LAG13); CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G25540.1). & (gnl|cdd|36820 : 104.0) no description available & (gnl|cdd|86441 : 81.8) no description available & (reliability: 376.0) & (original description: Putative LAG1, Description = ASC1-like protein 1, PFAM = PF03798)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben044scf00022114ctg006_46145-49014' '(at4g36830 : 319.0) HOS3-1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: GNS1/SUR4 membrane protein (InterPro:IPR002076); BEST Arabidopsis thaliana protein match is: GNS1/SUR4 membrane protein family (TAIR:AT1G75000.1); Has 156 Blast hits to 156 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 37; Plants - 71; Viruses - 2; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|38281 : 160.0) no description available & (reliability: 594.0) & (original description: Putative HOS3, Description = Elongation of fatty acids protein 3-like, PFAM = PF01151)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben044scf00029924ctg001_7626-14018' '(at1g13580 : 419.0) LAG1 longevity assurance homolog 3 (LAG13); CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G25540.1). & (q6eun0|ascl1_orysa : 393.0) ASC1-like protein 1 (Alternaria stem canker resistance-like protein 1) - Oryza sativa (Rice) & (gnl|cdd|36820 : 251.0) no description available & (gnl|cdd|86441 : 215.0) no description available & (reliability: 838.0) & (original description: Putative LAG1, Description = LAG1 longevity assurance-like protein, PFAM = PF03798)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben044scf00043523ctg002_1527-5076' '(at3g25540 : 306.0) LAG1 homolog 1; LONGEVITY ASSURANCE GENE 1 (LAG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: LAG1 longevity assurance homolog 3 (TAIR:AT1G13580.3); Has 1255 Blast hits to 1255 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 591; Fungi - 304; Plants - 188; Viruses - 3; Other Eukaryotes - 169 (source: NCBI BLink). & (q6eun0|ascl1_orysa : 305.0) ASC1-like protein 1 (Alternaria stem canker resistance-like protein 1) - Oryza sativa (Rice) & (gnl|cdd|36820 : 214.0) no description available & (gnl|cdd|86441 : 210.0) no description available & (reliability: 612.0) & (original description: Putative LAG1, Description = ASC1-like protein 1, PFAM = PF03798)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben044scf00051080ctg000_486-6334' '(at3g19260 : 220.0) LAG1 homolog . Loss of function mutant is sensitive to AAL-toxin. LOH2 is presumed to function in sphingolipid metabolism.; LAG1 homologue 2 (LOH2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to molecule of fungal origin; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: LAG1 longevity assurance homolog 3 (TAIR:AT1G13580.3); Has 1277 Blast hits to 1277 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 612; Fungi - 306; Plants - 183; Viruses - 3; Other Eukaryotes - 173 (source: NCBI BLink). & (q84qc0|ascl3_orysa : 219.0) ASC1-like protein 3 (Alternaria stem canker resistance-like protein 3) - Oryza sativa (Rice) & (gnl|cdd|86441 : 161.0) no description available & (gnl|cdd|36820 : 155.0) no description available & (reliability: 440.0) & (original description: Putative LAG1, Description = LAG1 longevity assurance-like protein, PFAM = PF03798)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben044scf00058016ctg001_8029-10226' '(at5g23450 : 239.0) Encodes a sphingosine kinase that specifically phosphorylates D-erythro-dihydrosphingosine (DHS), but not N-acetyl-DHS or D-threo-DHS. It also also phosphorylates D-erythro-sphingosine, trans-4, trans-8-sphingadienine and phytosphingosine.; long-chain base (LCB) kinase 1 (LCBK1); FUNCTIONS IN: diacylglycerol kinase activity, D-erythro-sphingosine kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, sphingolipid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206); BEST Arabidopsis thaliana protein match is: sphingosine kinase 1 (TAIR:AT4G21540.1); Has 1850 Blast hits to 1642 proteins in 445 species: Archae - 2; Bacteria - 669; Metazoa - 552; Fungi - 144; Plants - 247; Viruses - 0; Other Eukaryotes - 236 (source: NCBI BLink). & (gnl|cdd|36332 : 98.5) no description available & (reliability: 478.0) & (original description: Putative LCBK1, Description = Sphingoid long-chain bases kinase 1, PFAM = )' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf00120_183258-187804' '(at4g04930 : 526.0) Encodes a sphingolipid delta4-desaturase, involved in sphingolipid biosynthesis. Specifically expressed in floral tissues. Knockout mutants were devoid of sphinga-4,8-dienine in floral tissues.; DES-1-LIKE; FUNCTIONS IN: oxidoreductase activity, sphingolipid delta-4 desaturase activity; INVOLVED IN: sphingolipid biosynthetic process; LOCATED IN: integral to membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Sphingolipid delta4-desaturase, N-terminal (InterPro:IPR013866), Fatty acid desaturase, type 1 (InterPro:IPR005804), Sphingolipid delta4-desaturase (InterPro:IPR011388); Has 703 Blast hits to 697 proteins in 257 species: Archae - 0; Bacteria - 174; Metazoa - 227; Fungi - 120; Plants - 36; Viruses - 3; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|38198 : 478.0) no description available & (gnl|cdd|58174 : 440.0) no description available & (reliability: 1052.0) & (original description: Putative des1, Description = Sphingolipid delta(4)-desaturase DES1, PFAM = PF08557;PF00487)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf00494_425091-431232' '(at4g36480 : 688.0) Encodes the LCB1 subunit of serine palmitoyltransferase. Together with the LCB2 subunit, forms a functional serine palmitoyltransferase complex, which catalyzes the first reaction of sphingolipid biosynthesis. Knockout of LCB1 was embryo lethal. Partial suppression of LCB1 expression led to smaller plants due to reduced cell expansion.; long-chain base1 (LCB1); FUNCTIONS IN: protein binding, serine C-palmitoyltransferase activity; INVOLVED IN: cell growth, sphingolipid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: long chain base2 (TAIR:AT5G23670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36572 : 557.0) no description available & (gnl|cdd|30505 : 304.0) no description available & (reliability: 1376.0) & (original description: Putative LCB1, Description = Long chain base biosynthesis protein 1, PFAM = PF00155)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf01171_527997-532057' '(at4g22330 : 407.0) Encodes AtCES1 for Acyl-CoA independent ceramide synthase.; ATCES1; FUNCTIONS IN: catalytic activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: ceramide metabolic process; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ceramidase (InterPro:IPR008901); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69404 : 223.0) no description available & (gnl|cdd|37540 : 195.0) no description available & (reliability: 814.0) & (original description: Putative AtCES1, Description = Acyl-CoA independent ceramide synthase, PFAM = PF05875)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf01235_14337-30408' '(at4g36480 : 677.0) Encodes the LCB1 subunit of serine palmitoyltransferase. Together with the LCB2 subunit, forms a functional serine palmitoyltransferase complex, which catalyzes the first reaction of sphingolipid biosynthesis. Knockout of LCB1 was embryo lethal. Partial suppression of LCB1 expression led to smaller plants due to reduced cell expansion.; long-chain base1 (LCB1); FUNCTIONS IN: protein binding, serine C-palmitoyltransferase activity; INVOLVED IN: cell growth, sphingolipid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: long chain base2 (TAIR:AT5G23670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36572 : 543.0) no description available & (gnl|cdd|30505 : 294.0) no description available & (reliability: 1354.0) & (original description: Putative LCB1, Description = Long chain base biosynthesis protein 1, PFAM = PF00155)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf01655_531342-535332' '(at2g46210 : 645.0) Fatty acid/sphingolipid desaturase; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water, iron ion binding, heme binding; INVOLVED IN: oxidation reduction, fatty acid biosynthetic process, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1 (InterPro:IPR005804), Fatty acid/sphingolipid desaturase (InterPro:IPR012171), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: Fatty acid/sphingolipid desaturase (TAIR:AT3G61580.1); Has 5941 Blast hits to 5850 proteins in 906 species: Archae - 2; Bacteria - 1188; Metazoa - 1112; Fungi - 1689; Plants - 939; Viruses - 2; Other Eukaryotes - 1009 (source: NCBI BLink). & (gnl|cdd|39433 : 396.0) no description available & (gnl|cdd|58172 : 178.0) no description available & (reliability: 1290.0) & (original description: Putative sld1, Description = Delta(8)-fatty-acid desaturase, PFAM = PF00487;PF00173)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf01661_217039-221868' '(at1g13580 : 262.0) LAG1 longevity assurance homolog 3 (LAG13); CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G25540.1). & (q6eun0|ascl1_orysa : 255.0) ASC1-like protein 1 (Alternaria stem canker resistance-like protein 1) - Oryza sativa (Rice) & (gnl|cdd|36820 : 225.0) no description available & (gnl|cdd|86441 : 216.0) no description available & (reliability: 524.0) & (original description: Putative LAG1, Description = ASC1-like protein 1, PFAM = PF03798)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf01942_129062-136863' '(gnl|cdd|36092 : 322.0) no description available & (at1g69640 : 311.0) Encodes one of the two redundant sphingoid base hydroxylases (SBH). Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Double mutants of SBHs were dwarfed and not able to progress from vegetative to reproductive growth.; sphingoid base hydroxylase 1 (SBH1); CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sphingoid base hydroxylase 2 (TAIR:AT1G14290.1); Has 2400 Blast hits to 2339 proteins in 395 species: Archae - 0; Bacteria - 406; Metazoa - 416; Fungi - 708; Plants - 429; Viruses - 3; Other Eukaryotes - 438 (source: NCBI BLink). & (gnl|cdd|32818 : 99.8) no description available & (reliability: 622.0) & (original description: Putative SBH2, Description = Sphinganine C4-monooxygenase 2, PFAM = PF04116)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf01950_354905-364811' '(at1g27980 : 787.0) dihydrosphingosine phosphate lyase (DPL1); FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity; INVOLVED IN: sphingolipid catabolic process, cellular amino acid metabolic process; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase (TAIR:AT5G17330.1); Has 6215 Blast hits to 6205 proteins in 1686 species: Archae - 244; Bacteria - 4383; Metazoa - 292; Fungi - 491; Plants - 296; Viruses - 3; Other Eukaryotes - 506 (source: NCBI BLink). & (q52rg7|sgpl_orysa : 764.0) Sphingosine-1-phosphate lyase precursor (EC 4.1.2.27) (SP-lyase) (SPL) (Sphingosine-1-phosphate aldolase) - Oryza sativa (Rice) & (gnl|cdd|36597 : 494.0) no description available & (gnl|cdd|30425 : 250.0) no description available & (reliability: 1574.0) & (original description: Putative DPL1, Description = Sphingosine-1-phosphate lyase, PFAM = PF00282)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf01998_1015573-1019017' '(at2g46210 : 655.0) Fatty acid/sphingolipid desaturase; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water, iron ion binding, heme binding; INVOLVED IN: oxidation reduction, fatty acid biosynthetic process, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1 (InterPro:IPR005804), Fatty acid/sphingolipid desaturase (InterPro:IPR012171), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: Fatty acid/sphingolipid desaturase (TAIR:AT3G61580.1); Has 5941 Blast hits to 5850 proteins in 906 species: Archae - 2; Bacteria - 1188; Metazoa - 1112; Fungi - 1689; Plants - 939; Viruses - 2; Other Eukaryotes - 1009 (source: NCBI BLink). & (gnl|cdd|39433 : 390.0) no description available & (gnl|cdd|58172 : 191.0) no description available & (reliability: 1310.0) & (original description: Putative sld1, Description = Delta-8 sphingolipid desaturase, PFAM = PF00487;PF00173)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf02090_740582-746264' '(gnl|cdd|36092 : 325.0) no description available & (at1g69640 : 322.0) Encodes one of the two redundant sphingoid base hydroxylases (SBH). Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Double mutants of SBHs were dwarfed and not able to progress from vegetative to reproductive growth.; sphingoid base hydroxylase 1 (SBH1); CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sphingoid base hydroxylase 2 (TAIR:AT1G14290.1); Has 2400 Blast hits to 2339 proteins in 395 species: Archae - 0; Bacteria - 406; Metazoa - 416; Fungi - 708; Plants - 429; Viruses - 3; Other Eukaryotes - 438 (source: NCBI BLink). & (gnl|cdd|32818 : 101.0) no description available & (reliability: 644.0) & (original description: Putative SC4H, Description = Sphingolipid C4 hydroxylase, PFAM = PF04116)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf02240_62879-69907' '(at4g04930 : 517.0) Encodes a sphingolipid delta4-desaturase, involved in sphingolipid biosynthesis. Specifically expressed in floral tissues. Knockout mutants were devoid of sphinga-4,8-dienine in floral tissues.; DES-1-LIKE; FUNCTIONS IN: oxidoreductase activity, sphingolipid delta-4 desaturase activity; INVOLVED IN: sphingolipid biosynthetic process; LOCATED IN: integral to membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Sphingolipid delta4-desaturase, N-terminal (InterPro:IPR013866), Fatty acid desaturase, type 1 (InterPro:IPR005804), Sphingolipid delta4-desaturase (InterPro:IPR011388); Has 703 Blast hits to 697 proteins in 257 species: Archae - 0; Bacteria - 174; Metazoa - 227; Fungi - 120; Plants - 36; Viruses - 3; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|38198 : 470.0) no description available & (gnl|cdd|58174 : 431.0) no description available & (reliability: 1034.0) & (original description: Putative des1, Description = Sphingolipid delta(4)-desaturase DES1, PFAM = PF00487;PF08557)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf02408_88679-99178' '(at3g19260 : 334.0) LAG1 homolog . Loss of function mutant is sensitive to AAL-toxin. LOH2 is presumed to function in sphingolipid metabolism.; LAG1 homologue 2 (LOH2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to molecule of fungal origin; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: LAG1 longevity assurance homolog 3 (TAIR:AT1G13580.3); Has 1277 Blast hits to 1277 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 612; Fungi - 306; Plants - 183; Viruses - 3; Other Eukaryotes - 173 (source: NCBI BLink). & (q84qc0|ascl3_orysa : 298.0) ASC1-like protein 3 (Alternaria stem canker resistance-like protein 3) - Oryza sativa (Rice) & (gnl|cdd|36820 : 229.0) no description available & (gnl|cdd|86441 : 203.0) no description available & (reliability: 668.0) & (original description: Putative LAG2, Description = LAG1 longevity assurance homolog 2, PFAM = PF03798)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf03937_268677-271504' '(at3g06470 : 278.0) GNS1/SUR4 membrane protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GNS1/SUR4 membrane protein (InterPro:IPR002076); BEST Arabidopsis thaliana protein match is: GNS1/SUR4 membrane protein family (TAIR:AT3G06460.1); Has 2217 Blast hits to 2209 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 1418; Fungi - 362; Plants - 108; Viruses - 14; Other Eukaryotes - 315 (source: NCBI BLink). & (gnl|cdd|38281 : 157.0) no description available & (gnl|cdd|85273 : 111.0) no description available & (reliability: 556.0) & (original description: Putative KCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF01151)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf04422_13607-20374' '(at3g58490 : 518.0) Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: sphingosine-1-phosphate phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); Has 1069 Blast hits to 1069 proteins in 384 species: Archae - 10; Bacteria - 625; Metazoa - 135; Fungi - 136; Plants - 31; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|38033 : 309.0) no description available & (gnl|cdd|48092 : 149.0) no description available & (reliability: 1036.0) & (original description: Putative LPPD, Description = Lipid phosphate phosphatase delta, PFAM = PF01569)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf04430_366925-373317' '(at1g13580 : 399.0) LAG1 longevity assurance homolog 3 (LAG13); CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G25540.1). & (q6eun0|ascl1_orysa : 375.0) ASC1-like protein 1 (Alternaria stem canker resistance-like protein 1) - Oryza sativa (Rice) & (gnl|cdd|36820 : 246.0) no description available & (gnl|cdd|86441 : 213.0) no description available & (reliability: 798.0) & (original description: Putative LAG1, Description = LAG1 longevity assurance-like protein, PFAM = PF03798)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf04800_300484-303419' '(at4g36830 : 247.0) HOS3-1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: GNS1/SUR4 membrane protein (InterPro:IPR002076); BEST Arabidopsis thaliana protein match is: GNS1/SUR4 membrane protein family (TAIR:AT1G75000.1); Has 156 Blast hits to 156 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 37; Plants - 71; Viruses - 2; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|38281 : 142.0) no description available & (reliability: 482.0) & (original description: Putative HOS3, Description = Elongation of fatty acids protein 3-like, PFAM = PF01151)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf04871_2441653-2444969' '(at2g46210 : 646.0) Fatty acid/sphingolipid desaturase; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water, iron ion binding, heme binding; INVOLVED IN: oxidation reduction, fatty acid biosynthetic process, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1 (InterPro:IPR005804), Fatty acid/sphingolipid desaturase (InterPro:IPR012171), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: Fatty acid/sphingolipid desaturase (TAIR:AT3G61580.1); Has 5941 Blast hits to 5850 proteins in 906 species: Archae - 2; Bacteria - 1188; Metazoa - 1112; Fungi - 1689; Plants - 939; Viruses - 2; Other Eukaryotes - 1009 (source: NCBI BLink). & (gnl|cdd|39433 : 398.0) no description available & (gnl|cdd|58172 : 177.0) no description available & (reliability: 1292.0) & (original description: Putative sld1, Description = Delta-8 sphingolipid desaturase, PFAM = PF00487;PF00173)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf05140_3994-29535' '(at3g19260 : 306.0) LAG1 homolog . Loss of function mutant is sensitive to AAL-toxin. LOH2 is presumed to function in sphingolipid metabolism.; LAG1 homologue 2 (LOH2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to molecule of fungal origin; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: LAG1 longevity assurance homolog 3 (TAIR:AT1G13580.3); Has 1277 Blast hits to 1277 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 612; Fungi - 306; Plants - 183; Viruses - 3; Other Eukaryotes - 173 (source: NCBI BLink). & (q84qc0|ascl3_orysa : 287.0) ASC1-like protein 3 (Alternaria stem canker resistance-like protein 3) - Oryza sativa (Rice) & (gnl|cdd|36820 : 212.0) no description available & (gnl|cdd|86441 : 190.0) no description available & (reliability: 612.0) & (original description: Putative LAG1, Description = LAG1 longevity assurance-like protein, PFAM = PF03798)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf05143_80908-93434' '(at4g21540 : 538.0) Encodes a sphingosine kinase, also has enzyme activity towards other plant long-chain sphingoid bases. Involved in guard cell ABA signalling and seed germination.; sphingosine kinase 1 (SPHK1); FUNCTIONS IN: diacylglycerol kinase activity, sphinganine kinase activity, D-erythro-sphingosine kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, seed germination, response to abscisic acid stimulus; LOCATED IN: plant-type vacuole membrane, vacuole; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206); BEST Arabidopsis thaliana protein match is: Diacylglycerol kinase family protein (TAIR:AT4G21534.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36332 : 259.0) no description available & (gnl|cdd|31785 : 116.0) no description available & (reliability: 1076.0) & (original description: Putative SPHK1, Description = Sphingosine kinase 1, PFAM = PF00781)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf05399_13607-27455' '(at1g27980 : 828.0) dihydrosphingosine phosphate lyase (DPL1); FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity; INVOLVED IN: sphingolipid catabolic process, cellular amino acid metabolic process; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase (TAIR:AT5G17330.1); Has 6215 Blast hits to 6205 proteins in 1686 species: Archae - 244; Bacteria - 4383; Metazoa - 292; Fungi - 491; Plants - 296; Viruses - 3; Other Eukaryotes - 506 (source: NCBI BLink). & (q52rg7|sgpl_orysa : 784.0) Sphingosine-1-phosphate lyase precursor (EC 4.1.2.27) (SP-lyase) (SPL) (Sphingosine-1-phosphate aldolase) - Oryza sativa (Rice) & (gnl|cdd|36597 : 516.0) no description available & (gnl|cdd|30425 : 254.0) no description available & (reliability: 1656.0) & (original description: Putative DPL1, Description = Sphingosine-1-phosphate lyase, PFAM = PF00282)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf05711_42787-49187' '(at3g58490 : 545.0) Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: sphingosine-1-phosphate phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); Has 1069 Blast hits to 1069 proteins in 384 species: Archae - 10; Bacteria - 625; Metazoa - 135; Fungi - 136; Plants - 31; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|38033 : 311.0) no description available & (gnl|cdd|48092 : 156.0) no description available & (reliability: 1090.0) & (original description: Putative LPPD, Description = Phosphatidic acid phosphatase family protein, PFAM = PF01569)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf05989_289-6713' '(q6eun0|ascl1_orysa : 192.0) ASC1-like protein 1 (Alternaria stem canker resistance-like protein 1) - Oryza sativa (Rice) & (at1g13580 : 190.0) LAG1 longevity assurance homolog 3 (LAG13); CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G25540.1). & (gnl|cdd|36820 : 105.0) no description available & (gnl|cdd|86441 : 82.6) no description available & (reliability: 380.0) & (original description: Putative LAG1, Description = ASC1-like protein 1, PFAM = PF03798)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf06410_1019-6098' '(at2g46210 : 658.0) Fatty acid/sphingolipid desaturase; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water, iron ion binding, heme binding; INVOLVED IN: oxidation reduction, fatty acid biosynthetic process, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1 (InterPro:IPR005804), Fatty acid/sphingolipid desaturase (InterPro:IPR012171), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: Fatty acid/sphingolipid desaturase (TAIR:AT3G61580.1); Has 5941 Blast hits to 5850 proteins in 906 species: Archae - 2; Bacteria - 1188; Metazoa - 1112; Fungi - 1689; Plants - 939; Viruses - 2; Other Eukaryotes - 1009 (source: NCBI BLink). & (gnl|cdd|39433 : 397.0) no description available & (gnl|cdd|58172 : 177.0) no description available & (reliability: 1316.0) & (original description: Putative sld1, Description = Delta(8)-fatty-acid desaturase, PFAM = PF00487;PF00173)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf06545_459035-465101' '(at1g69640 : 399.0) Encodes one of the two redundant sphingoid base hydroxylases (SBH). Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Double mutants of SBHs were dwarfed and not able to progress from vegetative to reproductive growth.; sphingoid base hydroxylase 1 (SBH1); CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sphingoid base hydroxylase 2 (TAIR:AT1G14290.1); Has 2400 Blast hits to 2339 proteins in 395 species: Archae - 0; Bacteria - 406; Metazoa - 416; Fungi - 708; Plants - 429; Viruses - 3; Other Eukaryotes - 438 (source: NCBI BLink). & (gnl|cdd|36092 : 377.0) no description available & (gnl|cdd|32818 : 104.0) no description available & (reliability: 798.0) & (original description: Putative SBH2, Description = Sphinganine C4-monooxygenase 2, PFAM = PF04116)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf07003_29902-32753' '(at3g06470 : 173.0) GNS1/SUR4 membrane protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GNS1/SUR4 membrane protein (InterPro:IPR002076); BEST Arabidopsis thaliana protein match is: GNS1/SUR4 membrane protein family (TAIR:AT3G06460.1); Has 2217 Blast hits to 2209 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 1418; Fungi - 362; Plants - 108; Viruses - 14; Other Eukaryotes - 315 (source: NCBI BLink). & (gnl|cdd|38281 : 147.0) no description available & (gnl|cdd|85273 : 112.0) no description available & (reliability: 346.0) & (original description: Putative KCS, Description = GNS1/SUR4 membrane family protein, PFAM = PF01151)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf07058_244609-250518' '(at1g14290 : 367.0) Encodes one of the two redundant sphingoid base hydroxylases (SBH). Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Double mutants of SBHs were dwarfed and not able to progress from vegetative to reproductive growth.; sphingoid base hydroxylase 2 (SBH2); CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sphingoid base hydroxylase 1 (TAIR:AT1G69640.1); Has 2314 Blast hits to 2272 proteins in 379 species: Archae - 0; Bacteria - 367; Metazoa - 413; Fungi - 680; Plants - 393; Viruses - 3; Other Eukaryotes - 458 (source: NCBI BLink). & (gnl|cdd|36092 : 365.0) no description available & (gnl|cdd|32818 : 101.0) no description available & (reliability: 734.0) & (original description: Putative sur2, Description = Sphingoid base hydroxylase 2, PFAM = PF04116)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf07069_70775-83765' '(at4g21540 : 588.0) Encodes a sphingosine kinase, also has enzyme activity towards other plant long-chain sphingoid bases. Involved in guard cell ABA signalling and seed germination.; sphingosine kinase 1 (SPHK1); FUNCTIONS IN: diacylglycerol kinase activity, sphinganine kinase activity, D-erythro-sphingosine kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, seed germination, response to abscisic acid stimulus; LOCATED IN: plant-type vacuole membrane, vacuole; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206); BEST Arabidopsis thaliana protein match is: Diacylglycerol kinase family protein (TAIR:AT4G21534.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36332 : 291.0) no description available & (gnl|cdd|31785 : 130.0) no description available & (reliability: 1176.0) & (original description: Putative SPHK1, Description = Sphingosine kinase 1, PFAM = PF00781)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf08478_292461-298994' '(at4g22330 : 399.0) Encodes AtCES1 for Acyl-CoA independent ceramide synthase.; ATCES1; FUNCTIONS IN: catalytic activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: ceramide metabolic process; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ceramidase (InterPro:IPR008901); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69404 : 211.0) no description available & (gnl|cdd|37540 : 186.0) no description available & (reliability: 798.0) & (original description: Putative AtCES1, Description = Acyl-CoA independent ceramide synthase, PFAM = PF05875)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf11399_34138-38633' '(at3g06060 : 207.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G19200.1); Has 110611 Blast hits to 110370 proteins in 3576 species: Archae - 917; Bacteria - 74698; Metazoa - 5725; Fungi - 6415; Plants - 2635; Viruses - 0; Other Eukaryotes - 20221 (source: NCBI BLink). & (gnl|cdd|36424 : 171.0) no description available & (reliability: 414.0) & (original description: Putative KDSR, Description = 3-ketodihydrosphingosine reductase, PFAM = PF00106)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf11399_34947-40225' '(at3g06060 : 417.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G19200.1); Has 110611 Blast hits to 110370 proteins in 3576 species: Archae - 917; Bacteria - 74698; Metazoa - 5725; Fungi - 6415; Plants - 2635; Viruses - 0; Other Eukaryotes - 20221 (source: NCBI BLink). & (gnl|cdd|36424 : 321.0) no description available & (gnl|cdd|30648 : 160.0) no description available & (reliability: 834.0) & (original description: Putative TSC10B, Description = 3-dehydrosphinganine reductase TSC10B, PFAM = PF00106)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf12177_9611-12477' '(at1g75000 : 312.0) GNS1/SUR4 membrane protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: GNS1/SUR4 membrane protein (InterPro:IPR002076); BEST Arabidopsis thaliana protein match is: GNS1/SUR4 membrane protein family (TAIR:AT4G36830.1); Has 217 Blast hits to 217 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 53; Plants - 70; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|38281 : 163.0) no description available & (reliability: 624.0) & (original description: Putative BnaC06g35790D, Description = BnaC06g35790D protein, PFAM = PF01151)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf12369_138806-141675' '(at4g36830 : 318.0) HOS3-1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: GNS1/SUR4 membrane protein (InterPro:IPR002076); BEST Arabidopsis thaliana protein match is: GNS1/SUR4 membrane protein family (TAIR:AT1G75000.1); Has 156 Blast hits to 156 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 37; Plants - 71; Viruses - 2; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|38281 : 158.0) no description available & (reliability: 588.0) & (original description: Putative HOS3, Description = Elongation of fatty acids protein 3-like, PFAM = PF01151)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf13263_11972-16898' '(at1g69640 : 370.0) Encodes one of the two redundant sphingoid base hydroxylases (SBH). Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Double mutants of SBHs were dwarfed and not able to progress from vegetative to reproductive growth.; sphingoid base hydroxylase 1 (SBH1); CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sphingoid base hydroxylase 2 (TAIR:AT1G14290.1); Has 2400 Blast hits to 2339 proteins in 395 species: Archae - 0; Bacteria - 406; Metazoa - 416; Fungi - 708; Plants - 429; Viruses - 3; Other Eukaryotes - 438 (source: NCBI BLink). & (gnl|cdd|36092 : 366.0) no description available & (gnl|cdd|32818 : 101.0) no description available & (reliability: 740.0) & (original description: Putative SBH2, Description = Sphinganine C4-monooxygenase 2, PFAM = PF04116)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf15049_129608-139577' '(at5g23450 : 899.0) Encodes a sphingosine kinase that specifically phosphorylates D-erythro-dihydrosphingosine (DHS), but not N-acetyl-DHS or D-threo-DHS. It also also phosphorylates D-erythro-sphingosine, trans-4, trans-8-sphingadienine and phytosphingosine.; long-chain base (LCB) kinase 1 (LCBK1); FUNCTIONS IN: diacylglycerol kinase activity, D-erythro-sphingosine kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, sphingolipid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206); BEST Arabidopsis thaliana protein match is: sphingosine kinase 1 (TAIR:AT4G21540.1); Has 1850 Blast hits to 1642 proteins in 445 species: Archae - 2; Bacteria - 669; Metazoa - 552; Fungi - 144; Plants - 247; Viruses - 0; Other Eukaryotes - 236 (source: NCBI BLink). & (gnl|cdd|36332 : 305.0) no description available & (gnl|cdd|31785 : 113.0) no description available & (reliability: 1798.0) & (original description: Putative LCBK1, Description = Sphingoid long-chain bases kinase 1, PFAM = PF00781)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf15349_83408-86265' '(at3g06470 : 249.0) GNS1/SUR4 membrane protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GNS1/SUR4 membrane protein (InterPro:IPR002076); BEST Arabidopsis thaliana protein match is: GNS1/SUR4 membrane protein family (TAIR:AT3G06460.1); Has 2217 Blast hits to 2209 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 1418; Fungi - 362; Plants - 108; Viruses - 14; Other Eukaryotes - 315 (source: NCBI BLink). & (gnl|cdd|38281 : 158.0) no description available & (gnl|cdd|85273 : 98.9) no description available & (reliability: 498.0) & (original description: Putative KCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF01151)' T '11.8.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids' 'niben101scf17422_116471-130991' '(at1g13580 : 426.0) LAG1 longevity assurance homolog 3 (LAG13); CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G25540.1). & (q6eun0|ascl1_orysa : 390.0) ASC1-like protein 1 (Alternaria stem canker resistance-like protein 1) - Oryza sativa (Rice) & (gnl|cdd|36820 : 245.0) no description available & (gnl|cdd|86441 : 206.0) no description available & (reliability: 852.0) & (original description: Putative LAG1, Description = LAG1 longevity assurance-like protein, PFAM = PF03798)' T '11.8.1.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids.ceramidase' 'nbv0.3scaffold10782_1427-17474' '(gnl|cdd|37443 : 1162.0) no description available & (at1g07380 : 1156.0) Neutral/alkaline non-lysosomal ceramidase; FUNCTIONS IN: ceramidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Neutral/alkaline nonlysosomal ceramidase (InterPro:IPR006823); BEST Arabidopsis thaliana protein match is: Neutral/alkaline non-lysosomal ceramidase (TAIR:AT5G58980.1); Has 713 Blast hits to 570 proteins in 199 species: Archae - 0; Bacteria - 295; Metazoa - 184; Fungi - 101; Plants - 78; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|68312 : 1001.0) no description available & (reliability: 2312.0) & (original description: Putative asah2, Description = Neutral ceramidase C, PFAM = PF04734;PF17048)' T '11.8.1.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids.ceramidase' 'nbv0.3scaffold27267_3056-21928' '(gnl|cdd|37443 : 890.0) no description available & (gnl|cdd|68312 : 840.0) no description available & (at2g38010 : 822.0) Neutral/alkaline non-lysosomal ceramidase; FUNCTIONS IN: ceramidase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Neutral/alkaline nonlysosomal ceramidase (InterPro:IPR006823); BEST Arabidopsis thaliana protein match is: Neutral/alkaline non-lysosomal ceramidase (TAIR:AT1G07380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1644.0) & (original description: Putative asah2, Description = Neutral ceramidase, PFAM = PF04734;PF17048)' T '11.8.1.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids.ceramidase' 'niben101scf02665_467347-485230' '(at1g07380 : 1185.0) Neutral/alkaline non-lysosomal ceramidase; FUNCTIONS IN: ceramidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Neutral/alkaline nonlysosomal ceramidase (InterPro:IPR006823); BEST Arabidopsis thaliana protein match is: Neutral/alkaline non-lysosomal ceramidase (TAIR:AT5G58980.1); Has 713 Blast hits to 570 proteins in 199 species: Archae - 0; Bacteria - 295; Metazoa - 184; Fungi - 101; Plants - 78; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|37443 : 1163.0) no description available & (gnl|cdd|68312 : 975.0) no description available & (reliability: 2370.0) & (original description: Putative dcd2A, Description = Neutral/alkaline nonlysosomal ceramidase family protein, PFAM = PF17048;PF04734)' T '11.8.1.1' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids.ceramidase' 'niben101scf05385_382151-402718' '(gnl|cdd|37443 : 884.0) no description available & (gnl|cdd|68312 : 834.0) no description available & (at2g38010 : 827.0) Neutral/alkaline non-lysosomal ceramidase; FUNCTIONS IN: ceramidase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Neutral/alkaline nonlysosomal ceramidase (InterPro:IPR006823); BEST Arabidopsis thaliana protein match is: Neutral/alkaline non-lysosomal ceramidase (TAIR:AT1G07380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1654.0) & (original description: Putative asah2, Description = Neutral ceramidase C, PFAM = PF17048;PF04734)' T '11.8.1.2' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids.serine C-palmitoyltransferase' 'niben044scf00014917ctg002_9501-15950' '(at5g23670 : 918.0) Encodes the LCB2 subunit of serine palmitoyltransferase, an enzyme involved in sphingosine biosynthesis. The protein is localized to the endoplasmic reticulum.; long chain base2 (LCB2); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class-II, pyridoxal-phosphate binding site (InterPro:IPR001917), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: serine palmitoyltransferase 1 (TAIR:AT3G48780.1); Has 10446 Blast hits to 10416 proteins in 2172 species: Archae - 77; Bacteria - 7037; Metazoa - 738; Fungi - 589; Plants - 234; Viruses - 9; Other Eukaryotes - 1762 (source: NCBI BLink). & (gnl|cdd|36571 : 779.0) no description available & (gnl|cdd|30505 : 340.0) no description available & (reliability: 1836.0) & (original description: Putative spt, Description = Serine palmitoyltransferase, PFAM = PF00155)' T '11.8.1.2' 'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids.serine C-palmitoyltransferase' 'niben101scf08137_406422-413236' '(at5g23670 : 922.0) Encodes the LCB2 subunit of serine palmitoyltransferase, an enzyme involved in sphingosine biosynthesis. The protein is localized to the endoplasmic reticulum.; long chain base2 (LCB2); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class-II, pyridoxal-phosphate binding site (InterPro:IPR001917), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: serine palmitoyltransferase 1 (TAIR:AT3G48780.1); Has 10446 Blast hits to 10416 proteins in 2172 species: Archae - 77; Bacteria - 7037; Metazoa - 738; Fungi - 589; Plants - 234; Viruses - 9; Other Eukaryotes - 1762 (source: NCBI BLink). & (gnl|cdd|36571 : 780.0) no description available & (gnl|cdd|30505 : 342.0) no description available & (reliability: 1844.0) & (original description: Putative spt, Description = Serine palmitoyltransferase, PFAM = PF00155)' T '11.8.1.3' 'lipid metabolism.''exotics'' (steroids, squalene etc).sphingolipids.ceramide glucosyltransferase' 'nbv0.3scaffold16714_26757-37624' '(at2g19880 : 862.0) Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: ceramide glucosyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173). & (gnl|cdd|37758 : 312.0) no description available & (reliability: 1724.0) & (original description: Putative GT21A1, Description = Ceramide beta-glucosyltransferase, PFAM = PF13506)' T '11.8.1.3' 'lipid metabolism.''exotics'' (steroids, squalene etc).sphingolipids.ceramide glucosyltransferase' 'niben101scf06509_362137-374080' '(at2g19880 : 786.0) Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: ceramide glucosyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173). & (gnl|cdd|37758 : 252.0) no description available & (reliability: 1572.0) & (original description: Putative GT21A1, Description = Ceramide beta-glucosyltransferase, PFAM = PF13506)' T '11.8.2' 'lipid metabolism.'exotics' (steroids, squalene etc).methylsterol monooxygenase' 'nbv0.5scaffold1124_236229-242260' '(at2g29390 : 357.0) Encodes a sterol 4-alpha-methyl-oxidase, specifically a 4-alpha-methyl-delta-7-sterol-4alpha-methyl-oxidase.; sterol 4-alpha-methyl-oxidase 2-2; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sterol 4-alpha-methyl-oxidase 2-1 (TAIR:AT1G07420.1); Has 2759 Blast hits to 2754 proteins in 480 species: Archae - 0; Bacteria - 620; Metazoa - 428; Fungi - 656; Plants - 468; Viruses - 3; Other Eukaryotes - 584 (source: NCBI BLink). & (gnl|cdd|36091 : 242.0) no description available & (reliability: 714.0) & (original description: Putative SMO1, Description = C-4 methylsterol oxidase, PFAM = PF04116)' T '11.8.2' 'lipid metabolism.'exotics' (steroids, squalene etc).methylsterol monooxygenase' 'niben044scf00023249ctg002_208-3188' '(at2g29390 : 391.0) Encodes a sterol 4-alpha-methyl-oxidase, specifically a 4-alpha-methyl-delta-7-sterol-4alpha-methyl-oxidase.; sterol 4-alpha-methyl-oxidase 2-2; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sterol 4-alpha-methyl-oxidase 2-1 (TAIR:AT1G07420.1); Has 2759 Blast hits to 2754 proteins in 480 species: Archae - 0; Bacteria - 620; Metazoa - 428; Fungi - 656; Plants - 468; Viruses - 3; Other Eukaryotes - 584 (source: NCBI BLink). & (gnl|cdd|36091 : 265.0) no description available & (gnl|cdd|32818 : 88.6) no description available & (reliability: 782.0) & (original description: Putative c4mox, Description = C-4 methylsterol oxidase, PFAM = PF04116)' T '11.8.2' 'lipid metabolism.'exotics' (steroids, squalene etc).methylsterol monooxygenase' 'niben101scf01655_63715-66612' '(gnl|cdd|36529 : 127.0) no description available & (at4g00840 : 119.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G60800.1); Has 5117 Blast hits to 5115 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 766; Plants - 830; Viruses - 0; Other Eukaryotes - 1332 (source: NCBI BLink). & (gnl|cdd|34870 : 99.7) no description available & (reliability: 224.0) & (original description: Putative REAM, Description = S-acyltransferase, PFAM = PF01529)' T '11.8.2' 'lipid metabolism.'exotics' (steroids, squalene etc).methylsterol monooxygenase' 'niben101scf02569_489352-495626' '(at4g12110 : 409.0) Encodes a member of the SMO1 family of sterol 4alpha-methyl oxidases. More specifically functions as a 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha- methyl oxidase.; sterol-4alpha-methyl oxidase 1-1 (SMO1-1); CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sterol C4-methyl oxidase 1-2 (TAIR:AT4G22756.1); Has 2081 Blast hits to 2076 proteins in 340 species: Archae - 0; Bacteria - 283; Metazoa - 426; Fungi - 681; Plants - 428; Viruses - 3; Other Eukaryotes - 260 (source: NCBI BLink). & (gnl|cdd|36091 : 287.0) no description available & (gnl|cdd|32818 : 97.9) no description available & (reliability: 818.0) & (original description: Putative SMO1, Description = C-4 methylsterol oxidase, PFAM = PF04116)' T '11.8.2' 'lipid metabolism.'exotics' (steroids, squalene etc).methylsterol monooxygenase' 'niben101scf05278_34832-43024' '(at2g29390 : 436.0) Encodes a sterol 4-alpha-methyl-oxidase, specifically a 4-alpha-methyl-delta-7-sterol-4alpha-methyl-oxidase.; sterol 4-alpha-methyl-oxidase 2-2; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sterol 4-alpha-methyl-oxidase 2-1 (TAIR:AT1G07420.1); Has 2759 Blast hits to 2754 proteins in 480 species: Archae - 0; Bacteria - 620; Metazoa - 428; Fungi - 656; Plants - 468; Viruses - 3; Other Eukaryotes - 584 (source: NCBI BLink). & (gnl|cdd|36091 : 301.0) no description available & (gnl|cdd|32818 : 94.8) no description available & (reliability: 872.0) & (original description: Putative c4mox, Description = C-4 methylsterol oxidase, PFAM = PF04116)' T '11.8.2' 'lipid metabolism.'exotics' (steroids, squalene etc).methylsterol monooxygenase' 'niben101scf05372_191239-199534' '(at1g07420 : 456.0) Arabidopsis thaliana sterol 4-alpha-methyl-oxidase mRNA; sterol 4-alpha-methyl-oxidase 2-1 (SMO2-1); FUNCTIONS IN: C-4 methylsterol oxidase activity, 4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase activity; INVOLVED IN: oxidation reduction, fatty acid biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sterol 4-alpha-methyl-oxidase 2-2 (TAIR:AT2G29390.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36091 : 299.0) no description available & (gnl|cdd|32818 : 94.0) no description available & (reliability: 912.0) & (original description: Putative c4mox, Description = C-4 methylsterol oxidase, PFAM = PF04116)' T '11.8.2' 'lipid metabolism.'exotics' (steroids, squalene etc).methylsterol monooxygenase' 'niben101scf05811_634934-642173' '(at2g29390 : 429.0) Encodes a sterol 4-alpha-methyl-oxidase, specifically a 4-alpha-methyl-delta-7-sterol-4alpha-methyl-oxidase.; sterol 4-alpha-methyl-oxidase 2-2; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sterol 4-alpha-methyl-oxidase 2-1 (TAIR:AT1G07420.1); Has 2759 Blast hits to 2754 proteins in 480 species: Archae - 0; Bacteria - 620; Metazoa - 428; Fungi - 656; Plants - 468; Viruses - 3; Other Eukaryotes - 584 (source: NCBI BLink). & (gnl|cdd|36091 : 296.0) no description available & (gnl|cdd|32818 : 95.6) no description available & (reliability: 858.0) & (original description: Putative c4mox, Description = C-4 methylsterol oxidase, PFAM = PF04116)' T '11.8.2' 'lipid metabolism.'exotics' (steroids, squalene etc).methylsterol monooxygenase' 'niben101scf09516_167222-172498' '(at4g12110 : 390.0) Encodes a member of the SMO1 family of sterol 4alpha-methyl oxidases. More specifically functions as a 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha- methyl oxidase.; sterol-4alpha-methyl oxidase 1-1 (SMO1-1); CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sterol C4-methyl oxidase 1-2 (TAIR:AT4G22756.1); Has 2081 Blast hits to 2076 proteins in 340 species: Archae - 0; Bacteria - 283; Metazoa - 426; Fungi - 681; Plants - 428; Viruses - 3; Other Eukaryotes - 260 (source: NCBI BLink). & (gnl|cdd|36091 : 266.0) no description available & (gnl|cdd|32818 : 91.3) no description available & (reliability: 780.0) & (original description: Putative SMO1, Description = C-4 methylsterol oxidase, PFAM = PF04116)' T '11.8.3' 'lipid metabolism.'exotics' (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase' 'nbv0.3scaffold4907_1-9627' '(at1g43620 : 332.0) Encodes a UDP-glucose:sterol-glucosyltransferase.; UGT80B1; FUNCTIONS IN: transferase activity, transferring glycosyl groups, sterol 3-beta-glucosyltransferase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G07020.2); Has 2818 Blast hits to 2779 proteins in 673 species: Archae - 0; Bacteria - 1703; Metazoa - 471; Fungi - 384; Plants - 146; Viruses - 8; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|86220 : 116.0) no description available & (reliability: 664.0) & (original description: Putative gstA, Description = Sterol glucosyltransferase, PFAM = PF03033)' T '11.8.3' 'lipid metabolism.'exotics' (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase' 'nbv0.3scaffold53173_5351-14056' '(at3g07020 : 547.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, carbohydrate metabolic process, metabolic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G43620.3); Has 2464 Blast hits to 2426 proteins in 636 species: Archae - 0; Bacteria - 1528; Metazoa - 298; Fungi - 386; Plants - 152; Viruses - 3; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|86220 : 119.0) no description available & (reliability: 1094.0) & (original description: Putative ugt, Description = Glycosyltransferase family 1 protein, PFAM = PF03033)' T '11.8.3' 'lipid metabolism.'exotics' (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase' 'nbv0.5scaffold58_1035344-1056456' '(at3g07020 : 808.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, carbohydrate metabolic process, metabolic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G43620.3); Has 2464 Blast hits to 2426 proteins in 636 species: Archae - 0; Bacteria - 1528; Metazoa - 298; Fungi - 386; Plants - 152; Viruses - 3; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|32004 : 153.0) no description available & (gnl|cdd|36406 : 90.0) no description available & (reliability: 1616.0) & (original description: Putative ugt, Description = Glycosyltransferase family 1 protein, PFAM = PF03033)' T '11.8.3' 'lipid metabolism.'exotics' (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase' 'niben101scf00177_1092556-1112740' '(at3g07020 : 773.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, carbohydrate metabolic process, metabolic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G43620.3); Has 2464 Blast hits to 2426 proteins in 636 species: Archae - 0; Bacteria - 1528; Metazoa - 298; Fungi - 386; Plants - 152; Viruses - 3; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|32004 : 158.0) no description available & (gnl|cdd|36406 : 93.8) no description available & (reliability: 1546.0) & (original description: Putative ugt, Description = Glycosyltransferase family 1 protein, PFAM = PF03033;PF00201)' T '11.8.3' 'lipid metabolism.'exotics' (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase' 'niben101scf01862_209129-268152' '(at1g43620 : 820.0) Encodes a UDP-glucose:sterol-glucosyltransferase.; UGT80B1; FUNCTIONS IN: transferase activity, transferring glycosyl groups, sterol 3-beta-glucosyltransferase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G07020.2); Has 2818 Blast hits to 2779 proteins in 673 species: Archae - 0; Bacteria - 1703; Metazoa - 471; Fungi - 384; Plants - 146; Viruses - 8; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|32004 : 174.0) no description available & (gnl|cdd|36406 : 95.0) no description available & (reliability: 1640.0) & (original description: Putative ugt, Description = Glycosyltransferase family 1 protein, PFAM = PF00201;PF03033)' T '11.8.3' 'lipid metabolism.'exotics' (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase' 'niben101scf03185_60511-81014' '(at3g07020 : 813.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, carbohydrate metabolic process, metabolic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G43620.3); Has 2464 Blast hits to 2426 proteins in 636 species: Archae - 0; Bacteria - 1528; Metazoa - 298; Fungi - 386; Plants - 152; Viruses - 3; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|32004 : 163.0) no description available & (gnl|cdd|36406 : 93.1) no description available & (reliability: 1626.0) & (original description: Putative ugt, Description = Glycosyltransferase family 1 protein, PFAM = PF03033)' T '11.8.3' 'lipid metabolism.'exotics' (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase' 'niben101scf03954_38097-58244' '(at1g43620 : 826.0) Encodes a UDP-glucose:sterol-glucosyltransferase.; UGT80B1; FUNCTIONS IN: transferase activity, transferring glycosyl groups, sterol 3-beta-glucosyltransferase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G07020.2); Has 2818 Blast hits to 2779 proteins in 673 species: Archae - 0; Bacteria - 1703; Metazoa - 471; Fungi - 384; Plants - 146; Viruses - 8; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|32004 : 176.0) no description available & (gnl|cdd|36406 : 93.8) no description available & (reliability: 1652.0) & (original description: Putative ugt, Description = Glycosyltransferase family 1 protein, PFAM = PF03033;PF00201)' T '11.8.3' 'lipid metabolism.'exotics' (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase' 'niben101scf04206_109543-132833' '(at3g07020 : 819.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, carbohydrate metabolic process, metabolic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G43620.3); Has 2464 Blast hits to 2426 proteins in 636 species: Archae - 0; Bacteria - 1528; Metazoa - 298; Fungi - 386; Plants - 152; Viruses - 3; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|32004 : 155.0) no description available & (gnl|cdd|36406 : 95.0) no description available & (reliability: 1638.0) & (original description: Putative ugt, Description = Glycosyltransferase family 1 protein, PFAM = PF03033)' T '11.8.3' 'lipid metabolism.'exotics' (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase' 'niben101scf04206_109643-133250' '(at3g07020 : 785.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, carbohydrate metabolic process, metabolic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G43620.3); Has 2464 Blast hits to 2426 proteins in 636 species: Archae - 0; Bacteria - 1528; Metazoa - 298; Fungi - 386; Plants - 152; Viruses - 3; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|32004 : 151.0) no description available & (gnl|cdd|36406 : 92.7) no description available & (reliability: 1570.0) & (original description: Putative ugt, Description = Glycosyltransferase family 1 protein, PFAM = PF03033)' T '11.8.3' 'lipid metabolism.'exotics' (steroids, squalene etc).UDP-glucose:sterol glucosyltransferase' 'niben101scf05316_346793-365801' '(at3g07020 : 761.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, carbohydrate metabolic process, metabolic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G43620.3); Has 2464 Blast hits to 2426 proteins in 636 species: Archae - 0; Bacteria - 1528; Metazoa - 298; Fungi - 386; Plants - 152; Viruses - 3; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|32004 : 151.0) no description available & (gnl|cdd|36406 : 88.8) no description available & (reliability: 1522.0) & (original description: Putative SgtL3, Description = Putative sterol glucosyltransferase, PFAM = PF00201;PF03033)' T '11.8.4' 'lipid metabolism.'exotics' (steroids, squalene etc).3-beta hydroxysteroid dehydrogenase/isomerase' 'nbv0.3scaffold435_113663-131197' '(at2g26260 : 740.0) Encodes an enzyme with 3β-hydroxysteroid dehydrogenase/C4-decarboxylase activity in vitro. The activity of the enzyme was determined using microsomal extracts of yeast overexpressing the Arabidopsis gene. Cytosolic fractions failed to be associated to the activity, leading to the speculation that the enzyme is membrane-bound.; 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 (3BETAHSD/D2); FUNCTIONS IN: 3-beta-hydroxy-delta5-steroid dehydrogenase activity, sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity; INVOLVED IN: steroid biosynthetic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), 3-beta hydroxysteroid dehydrogenase/isomerase (InterPro:IPR002225), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 (TAIR:AT1G47290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36643 : 357.0) no description available & (gnl|cdd|85225 : 260.0) no description available & (reliability: 1480.0) & (original description: Putative c4acd, Description = Reticulon-like protein, PFAM = PF01073;PF02453)' T '11.8.4' 'lipid metabolism.'exotics' (steroids, squalene etc).3-beta hydroxysteroid dehydrogenase/isomerase' 'nbv0.3scaffold4512_4852-14571' '(at2g43420 : 431.0) 3-beta hydroxysteroid dehydrogenase/isomerase family protein; FUNCTIONS IN: binding, 3-beta-hydroxy-delta5-steroid dehydrogenase activity, catalytic activity; INVOLVED IN: steroid biosynthetic process, metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), 3-beta hydroxysteroid dehydrogenase/isomerase (InterPro:IPR002225), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 (TAIR:AT2G26260.1); Has 10307 Blast hits to 10296 proteins in 2122 species: Archae - 301; Bacteria - 6803; Metazoa - 545; Fungi - 280; Plants - 752; Viruses - 81; Other Eukaryotes - 1545 (source: NCBI BLink). & (gnl|cdd|36643 : 238.0) no description available & (gnl|cdd|85225 : 209.0) no description available & (reliability: 862.0) & (original description: Putative c4acd, Description = Reticulon-like protein, PFAM = PF02453;PF01073;PF01073)' T '11.8.4' 'lipid metabolism.'exotics' (steroids, squalene etc).3-beta hydroxysteroid dehydrogenase/isomerase' 'niben101scf01323_284652-306308' '(at2g26260 : 793.0) Encodes an enzyme with 3β-hydroxysteroid dehydrogenase/C4-decarboxylase activity in vitro. The activity of the enzyme was determined using microsomal extracts of yeast overexpressing the Arabidopsis gene. Cytosolic fractions failed to be associated to the activity, leading to the speculation that the enzyme is membrane-bound.; 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 (3BETAHSD/D2); FUNCTIONS IN: 3-beta-hydroxy-delta5-steroid dehydrogenase activity, sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity; INVOLVED IN: steroid biosynthetic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), 3-beta hydroxysteroid dehydrogenase/isomerase (InterPro:IPR002225), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 (TAIR:AT1G47290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36643 : 371.0) no description available & (gnl|cdd|85225 : 264.0) no description available & (reliability: 1586.0) & (original description: Putative c4acd, Description = Reticulon-like protein, PFAM = PF02453;PF01073)' T '11.8.4' 'lipid metabolism.'exotics' (steroids, squalene etc).3-beta hydroxysteroid dehydrogenase/isomerase' 'niben101scf03375_109721-122317' '(at2g43420 : 454.0) 3-beta hydroxysteroid dehydrogenase/isomerase family protein; FUNCTIONS IN: binding, 3-beta-hydroxy-delta5-steroid dehydrogenase activity, catalytic activity; INVOLVED IN: steroid biosynthetic process, metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), 3-beta hydroxysteroid dehydrogenase/isomerase (InterPro:IPR002225), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 (TAIR:AT2G26260.1); Has 10307 Blast hits to 10296 proteins in 2122 species: Archae - 301; Bacteria - 6803; Metazoa - 545; Fungi - 280; Plants - 752; Viruses - 81; Other Eukaryotes - 1545 (source: NCBI BLink). & (gnl|cdd|36643 : 258.0) no description available & (gnl|cdd|85225 : 227.0) no description available & (reliability: 908.0) & (original description: Putative c4acd, Description = Reticulon-like protein, PFAM = PF01073;PF02453)' T '11.8.4' 'lipid metabolism.'exotics' (steroids, squalene etc).3-beta hydroxysteroid dehydrogenase/isomerase' 'niben101scf03424_159335-164772' '(at2g33630 : 726.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: 3-beta-hydroxy-delta5-steroid dehydrogenase activity, binding, catalytic activity; INVOLVED IN: steroid biosynthetic process, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-beta hydroxysteroid dehydrogenase/isomerase (InterPro:IPR002225), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 (TAIR:AT1G47290.2); Has 15942 Blast hits to 15941 proteins in 2471 species: Archae - 466; Bacteria - 10729; Metazoa - 579; Fungi - 380; Plants - 472; Viruses - 127; Other Eukaryotes - 3189 (source: NCBI BLink). & (gnl|cdd|36643 : 308.0) no description available & (gnl|cdd|85225 : 289.0) no description available & (reliability: 1452.0) & (original description: Putative sdr42e1, Description = Short-chain dehydrogenase/reductase family 42E member 1, PFAM = PF01073;PF14934)' T '11.8.4' 'lipid metabolism.'exotics' (steroids, squalene etc).3-beta hydroxysteroid dehydrogenase/isomerase' 'niben101scf04940_12174-22361' '(at2g26260 : 619.0) Encodes an enzyme with 3β-hydroxysteroid dehydrogenase/C4-decarboxylase activity in vitro. The activity of the enzyme was determined using microsomal extracts of yeast overexpressing the Arabidopsis gene. Cytosolic fractions failed to be associated to the activity, leading to the speculation that the enzyme is membrane-bound.; 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 (3BETAHSD/D2); FUNCTIONS IN: 3-beta-hydroxy-delta5-steroid dehydrogenase activity, sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity; INVOLVED IN: steroid biosynthetic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), 3-beta hydroxysteroid dehydrogenase/isomerase (InterPro:IPR002225), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 (TAIR:AT1G47290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36643 : 367.0) no description available & (gnl|cdd|85225 : 260.0) no description available & (reliability: 1238.0) & (original description: Putative c4acd, Description = Sterol decarboxylase, PFAM = PF01073)' T '11.8.4' 'lipid metabolism.'exotics' (steroids, squalene etc).3-beta hydroxysteroid dehydrogenase/isomerase' 'niben101scf07652_197016-218766' '(at2g26260 : 786.0) Encodes an enzyme with 3β-hydroxysteroid dehydrogenase/C4-decarboxylase activity in vitro. The activity of the enzyme was determined using microsomal extracts of yeast overexpressing the Arabidopsis gene. Cytosolic fractions failed to be associated to the activity, leading to the speculation that the enzyme is membrane-bound.; 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 (3BETAHSD/D2); FUNCTIONS IN: 3-beta-hydroxy-delta5-steroid dehydrogenase activity, sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity; INVOLVED IN: steroid biosynthetic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), 3-beta hydroxysteroid dehydrogenase/isomerase (InterPro:IPR002225), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 (TAIR:AT1G47290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36643 : 363.0) no description available & (gnl|cdd|85225 : 262.0) no description available & (reliability: 1572.0) & (original description: Putative c4acd, Description = Reticulon-like protein, PFAM = PF01073;PF02453)' T '11.8.4' 'lipid metabolism.'exotics' (steroids, squalene etc).3-beta hydroxysteroid dehydrogenase/isomerase' 'niben101scf18660_93550-98929' '(at2g33630 : 711.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: 3-beta-hydroxy-delta5-steroid dehydrogenase activity, binding, catalytic activity; INVOLVED IN: steroid biosynthetic process, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-beta hydroxysteroid dehydrogenase/isomerase (InterPro:IPR002225), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 (TAIR:AT1G47290.2); Has 15942 Blast hits to 15941 proteins in 2471 species: Archae - 466; Bacteria - 10729; Metazoa - 579; Fungi - 380; Plants - 472; Viruses - 127; Other Eukaryotes - 3189 (source: NCBI BLink). & (gnl|cdd|36643 : 303.0) no description available & (gnl|cdd|85225 : 290.0) no description available & (reliability: 1422.0) & (original description: Putative sdr42e1, Description = Short-chain dehydrogenase/reductase family 42E member 1, PFAM = PF14934;PF01073)' T '11.8.5' 'lipid metabolism.'exotics' (steroids, squalene etc).squalene monooxygenase' '' '' '11.8.6' 'lipid metabolism.'exotics' (steroids, squalene etc).cycloartenol synthase' 'nbv0.3scaffold39285_4884-16164' '(gnl|cdd|35718 : 1158.0) no description available & (at1g78960 : 1000.0) Encodes a multifunctional 2-3-oxidosqualene (OS)-triterpene cyclase that can cyclize OS into lupeol, alpha- and beta-amyrin.; lupeol synthase 2 (LUP2); CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases family protein (TAIR:AT1G66960.1); Has 2115 Blast hits to 2006 proteins in 580 species: Archae - 2; Bacteria - 935; Metazoa - 110; Fungi - 239; Plants - 613; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|29791 : 837.0) no description available & (reliability: 1994.0) & (original description: Putative OSCBPW, Description = Lupeol synthase, PFAM = PF13249;PF13243)' T '11.8.6' 'lipid metabolism.'exotics' (steroids, squalene etc).cycloartenol synthase' 'niben101scf00017_185506-201806' '(gnl|cdd|35718 : 1155.0) no description available & (at2g07050 : 1114.0) Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.; cycloartenol synthase 1 (CAS1); FUNCTIONS IN: cycloartenol synthase activity; INVOLVED IN: pentacyclic triterpenoid biosynthetic process, thylakoid membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lanosterol synthase 1 (TAIR:AT3G45130.1); Has 2063 Blast hits to 1929 proteins in 563 species: Archae - 2; Bacteria - 902; Metazoa - 86; Fungi - 243; Plants - 616; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|29791 : 854.0) no description available & (reliability: 2228.0) & (original description: Putative GgCAS1, Description = Cycloartenol synthase, PFAM = PF13243;PF13249)' T '11.8.6' 'lipid metabolism.'exotics' (steroids, squalene etc).cycloartenol synthase' 'niben101scf02836_328827-340340' '(gnl|cdd|35718 : 676.0) no description available & (at2g07050 : 612.0) Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.; cycloartenol synthase 1 (CAS1); FUNCTIONS IN: cycloartenol synthase activity; INVOLVED IN: pentacyclic triterpenoid biosynthetic process, thylakoid membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lanosterol synthase 1 (TAIR:AT3G45130.1); Has 2063 Blast hits to 1929 proteins in 563 species: Archae - 2; Bacteria - 902; Metazoa - 86; Fungi - 243; Plants - 616; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|29791 : 451.0) no description available & (reliability: 1224.0) & (original description: Putative bas1, Description = Terpene cyclase/mutase family member, PFAM = PF13249;PF13243)' T '11.8.6' 'lipid metabolism.'exotics' (steroids, squalene etc).cycloartenol synthase' 'niben101scf08080_22342-28396' '(at2g07050 : 158.0) Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.; cycloartenol synthase 1 (CAS1); FUNCTIONS IN: cycloartenol synthase activity; INVOLVED IN: pentacyclic triterpenoid biosynthetic process, thylakoid membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lanosterol synthase 1 (TAIR:AT3G45130.1); Has 2063 Blast hits to 1929 proteins in 563 species: Archae - 2; Bacteria - 902; Metazoa - 86; Fungi - 243; Plants - 616; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|35718 : 156.0) no description available & (gnl|cdd|29791 : 122.0) no description available & (reliability: 316.0) & (original description: Putative bas1, Description = Terpene cyclase/mutase family member, PFAM = PF13243)' T '11.8.6' 'lipid metabolism.'exotics' (steroids, squalene etc).cycloartenol synthase' 'niben101scf16532_80911-109776' '(at2g07050 : 1298.0) Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.; cycloartenol synthase 1 (CAS1); FUNCTIONS IN: cycloartenol synthase activity; INVOLVED IN: pentacyclic triterpenoid biosynthetic process, thylakoid membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lanosterol synthase 1 (TAIR:AT3G45130.1); Has 2063 Blast hits to 1929 proteins in 563 species: Archae - 2; Bacteria - 902; Metazoa - 86; Fungi - 243; Plants - 616; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|35718 : 1194.0) no description available & (gnl|cdd|29791 : 878.0) no description available & (reliability: 2596.0) & (original description: Putative bAS1, Description = Terpene cyclase/mutase family member, PFAM = PF13243;PF13249)' T '11.8.7' 'lipid metabolism.'exotics' (steroids, squalene etc).trans-2-enoyl-CoA reductase (NADPH)' 'niben044scf00030141ctg001_2227-5886' '(at3g55360 : 466.0) Enoyl-CoA reductase is involved in all very long chain fatty acids (VLCFA) elongation reactions that are required for cuticular wax, storage lipid and sphingolipid metabolism. The protein is located in the ER, but in contrast to its yeast homolog TSC13 is not particularly enriched in the nuclear envelope-vacuole junction. Mutants in this gene show abnormal organ morphology and stem glossiness. Cells in all tissues are only about 1/3 of the size of wild type cells. The morphological changes are most likely to result from the reduction in the VLCFA content of sphingolipids. Mutants also show abnormalities in the endocytic membrane organization and transport.; ECERIFERUM 10 (CER10); FUNCTIONS IN: fatty acid elongase activity, trans-2-enoyl-CoA reductase (NADPH) activity, 3-oxo-5-alpha-steroid 4-dehydrogenase activity; INVOLVED IN: sphingolipid metabolic process, wax biosynthetic process; LOCATED IN: endoplasmic reticulum, fatty acid elongase complex, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT5G16010.1); Has 1087 Blast hits to 1087 proteins in 269 species: Archae - 0; Bacteria - 73; Metazoa - 353; Fungi - 144; Plants - 184; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|36852 : 304.0) no description available & (gnl|cdd|66254 : 93.0) no description available & (reliability: 932.0) & (original description: Putative ECR, Description = Very-long-chain enoyl-CoA reductase, PFAM = PF02544)' T '11.8.7' 'lipid metabolism.'exotics' (steroids, squalene etc).trans-2-enoyl-CoA reductase (NADPH)' 'niben101scf02008_9649-21034' '(at3g55360 : 527.0) Enoyl-CoA reductase is involved in all very long chain fatty acids (VLCFA) elongation reactions that are required for cuticular wax, storage lipid and sphingolipid metabolism. The protein is located in the ER, but in contrast to its yeast homolog TSC13 is not particularly enriched in the nuclear envelope-vacuole junction. Mutants in this gene show abnormal organ morphology and stem glossiness. Cells in all tissues are only about 1/3 of the size of wild type cells. The morphological changes are most likely to result from the reduction in the VLCFA content of sphingolipids. Mutants also show abnormalities in the endocytic membrane organization and transport.; ECERIFERUM 10 (CER10); FUNCTIONS IN: fatty acid elongase activity, trans-2-enoyl-CoA reductase (NADPH) activity, 3-oxo-5-alpha-steroid 4-dehydrogenase activity; INVOLVED IN: sphingolipid metabolic process, wax biosynthetic process; LOCATED IN: endoplasmic reticulum, fatty acid elongase complex, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT5G16010.1); Has 1087 Blast hits to 1087 proteins in 269 species: Archae - 0; Bacteria - 73; Metazoa - 353; Fungi - 144; Plants - 184; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|36852 : 341.0) no description available & (gnl|cdd|66254 : 98.0) no description available & (reliability: 1054.0) & (original description: Putative ECR, Description = Very-long-chain enoyl-CoA reductase, PFAM = PF02544)' T '11.8.8' 'lipid metabolism.'exotics' (steroids, squalene etc).squalene synthase' 'nbv0.3scaffold53871_3049-12099' '(at4g34640 : 644.0) Encodes squalene synthase, which converts two molecules of farnesyl diphosphate (FPP) into squalene via an intermediate: presqualene diphosphate (PSPP). It is generally thought to be one of the key enzymes of sterol biosynthesis, since it catalyzes the first pathway-specific reaction of the sterol branch of the isoprenoid pathway.; squalene synthase 1 (SQS1); FUNCTIONS IN: farnesyl-diphosphate farnesyltransferase activity; INVOLVED IN: sterol biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site (InterPro:IPR019845), Terpenoid synthase (InterPro:IPR008949), Farnesyl-diphosphate farnesyltransferase (InterPro:IPR006449), Squalene/phytoene synthase (InterPro:IPR002060); BEST Arabidopsis thaliana protein match is: squalene synthase 2 (TAIR:AT4G34650.1); Has 1469 Blast hits to 1468 proteins in 521 species: Archae - 28; Bacteria - 581; Metazoa - 114; Fungi - 174; Plants - 415; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|36672 : 497.0) no description available & (gnl|cdd|64362 : 315.0) no description available & (reliability: 1288.0) & (original description: Putative erg9, Description = Squalene synthase, PFAM = PF00494)' T '11.8.8' 'lipid metabolism.'exotics' (steroids, squalene etc).squalene synthase' 'nbv0.5scaffold5195_4110-50945' '(at4g34650 : 457.0) Encodes a protein with similarity to squalene synthase which catalyzes the first committed step in sterol biosynthesis. To date no experimental evidence exists that SQS2 functions as a squalene synthase and some experiments indicate it does not have this function.; squalene synthase 2 (SQS2); FUNCTIONS IN: farnesyl-diphosphate farnesyltransferase activity; INVOLVED IN: N-terminal protein myristoylation, sterol biosynthetic process; LOCATED IN: integral to membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Terpenoid synthase (InterPro:IPR008949), Farnesyl-diphosphate farnesyltransferase (InterPro:IPR006449), Squalene/phytoene synthase (InterPro:IPR002060); BEST Arabidopsis thaliana protein match is: squalene synthase 1 (TAIR:AT4G34640.1); Has 1176 Blast hits to 1175 proteins in 496 species: Archae - 34; Bacteria - 579; Metazoa - 114; Fungi - 168; Plants - 163; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|36672 : 378.0) no description available & (gnl|cdd|64362 : 239.0) no description available & (reliability: 914.0) & (original description: Putative TSS, Description = Squalene synthase, PFAM = PF00494)' T '11.8.8' 'lipid metabolism.'exotics' (steroids, squalene etc).squalene synthase' 'niben044scf00023480ctg004_1-8076' '(at4g34640 : 531.0) Encodes squalene synthase, which converts two molecules of farnesyl diphosphate (FPP) into squalene via an intermediate: presqualene diphosphate (PSPP). It is generally thought to be one of the key enzymes of sterol biosynthesis, since it catalyzes the first pathway-specific reaction of the sterol branch of the isoprenoid pathway.; squalene synthase 1 (SQS1); FUNCTIONS IN: farnesyl-diphosphate farnesyltransferase activity; INVOLVED IN: sterol biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site (InterPro:IPR019845), Terpenoid synthase (InterPro:IPR008949), Farnesyl-diphosphate farnesyltransferase (InterPro:IPR006449), Squalene/phytoene synthase (InterPro:IPR002060); BEST Arabidopsis thaliana protein match is: squalene synthase 2 (TAIR:AT4G34650.1); Has 1469 Blast hits to 1468 proteins in 521 species: Archae - 28; Bacteria - 581; Metazoa - 114; Fungi - 174; Plants - 415; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|36672 : 396.0) no description available & (gnl|cdd|64362 : 223.0) no description available & (reliability: 1062.0) & (original description: Putative fdfT, Description = Squalene synthase, PFAM = PF00494)' T '11.8.8' 'lipid metabolism.'exotics' (steroids, squalene etc).squalene synthase' 'niben044scf00050609ctg001_726-6400' '(at4g34640 : 472.0) Encodes squalene synthase, which converts two molecules of farnesyl diphosphate (FPP) into squalene via an intermediate: presqualene diphosphate (PSPP). It is generally thought to be one of the key enzymes of sterol biosynthesis, since it catalyzes the first pathway-specific reaction of the sterol branch of the isoprenoid pathway.; squalene synthase 1 (SQS1); FUNCTIONS IN: farnesyl-diphosphate farnesyltransferase activity; INVOLVED IN: sterol biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site (InterPro:IPR019845), Terpenoid synthase (InterPro:IPR008949), Farnesyl-diphosphate farnesyltransferase (InterPro:IPR006449), Squalene/phytoene synthase (InterPro:IPR002060); BEST Arabidopsis thaliana protein match is: squalene synthase 2 (TAIR:AT4G34650.1); Has 1469 Blast hits to 1468 proteins in 521 species: Archae - 28; Bacteria - 581; Metazoa - 114; Fungi - 174; Plants - 415; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|36672 : 384.0) no description available & (gnl|cdd|64362 : 227.0) no description available & (reliability: 944.0) & (original description: Putative sqs, Description = Squalene synthase, PFAM = PF00494)' T '11.8.8' 'lipid metabolism.'exotics' (steroids, squalene etc).squalene synthase' 'niben101scf01025_36586-45286' '(at4g34640 : 635.0) Encodes squalene synthase, which converts two molecules of farnesyl diphosphate (FPP) into squalene via an intermediate: presqualene diphosphate (PSPP). It is generally thought to be one of the key enzymes of sterol biosynthesis, since it catalyzes the first pathway-specific reaction of the sterol branch of the isoprenoid pathway.; squalene synthase 1 (SQS1); FUNCTIONS IN: farnesyl-diphosphate farnesyltransferase activity; INVOLVED IN: sterol biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site (InterPro:IPR019845), Terpenoid synthase (InterPro:IPR008949), Farnesyl-diphosphate farnesyltransferase (InterPro:IPR006449), Squalene/phytoene synthase (InterPro:IPR002060); BEST Arabidopsis thaliana protein match is: squalene synthase 2 (TAIR:AT4G34650.1); Has 1469 Blast hits to 1468 proteins in 521 species: Archae - 28; Bacteria - 581; Metazoa - 114; Fungi - 174; Plants - 415; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|36672 : 492.0) no description available & (gnl|cdd|64362 : 299.0) no description available & (reliability: 1270.0) & (original description: Putative erg9, Description = Squalene synthase, PFAM = PF00494)' T '11.8.8' 'lipid metabolism.'exotics' (steroids, squalene etc).squalene synthase' 'niben101scf01253_19167-37145' '(at4g34650 : 550.0) Encodes a protein with similarity to squalene synthase which catalyzes the first committed step in sterol biosynthesis. To date no experimental evidence exists that SQS2 functions as a squalene synthase and some experiments indicate it does not have this function.; squalene synthase 2 (SQS2); FUNCTIONS IN: farnesyl-diphosphate farnesyltransferase activity; INVOLVED IN: N-terminal protein myristoylation, sterol biosynthetic process; LOCATED IN: integral to membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Terpenoid synthase (InterPro:IPR008949), Farnesyl-diphosphate farnesyltransferase (InterPro:IPR006449), Squalene/phytoene synthase (InterPro:IPR002060); BEST Arabidopsis thaliana protein match is: squalene synthase 1 (TAIR:AT4G34640.1); Has 1176 Blast hits to 1175 proteins in 496 species: Archae - 34; Bacteria - 579; Metazoa - 114; Fungi - 168; Plants - 163; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|36672 : 437.0) no description available & (gnl|cdd|64362 : 248.0) no description available & (reliability: 1100.0) & (original description: Putative erg9, Description = Squalene synthase, PFAM = PF00494)' T '11.8.8' 'lipid metabolism.'exotics' (steroids, squalene etc).squalene synthase' 'niben101scf04664_253943-263747' '(at4g34640 : 648.0) Encodes squalene synthase, which converts two molecules of farnesyl diphosphate (FPP) into squalene via an intermediate: presqualene diphosphate (PSPP). It is generally thought to be one of the key enzymes of sterol biosynthesis, since it catalyzes the first pathway-specific reaction of the sterol branch of the isoprenoid pathway.; squalene synthase 1 (SQS1); FUNCTIONS IN: farnesyl-diphosphate farnesyltransferase activity; INVOLVED IN: sterol biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site (InterPro:IPR019845), Terpenoid synthase (InterPro:IPR008949), Farnesyl-diphosphate farnesyltransferase (InterPro:IPR006449), Squalene/phytoene synthase (InterPro:IPR002060); BEST Arabidopsis thaliana protein match is: squalene synthase 2 (TAIR:AT4G34650.1); Has 1469 Blast hits to 1468 proteins in 521 species: Archae - 28; Bacteria - 581; Metazoa - 114; Fungi - 174; Plants - 415; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|36672 : 502.0) no description available & (gnl|cdd|64362 : 321.0) no description available & (reliability: 1296.0) & (original description: Putative erg9, Description = Squalene synthase, PFAM = PF00494)' T '11.8.8' 'lipid metabolism.'exotics' (steroids, squalene etc).squalene synthase' 'niben101scf06023_264124-282712' '(at4g34640 : 554.0) Encodes squalene synthase, which converts two molecules of farnesyl diphosphate (FPP) into squalene via an intermediate: presqualene diphosphate (PSPP). It is generally thought to be one of the key enzymes of sterol biosynthesis, since it catalyzes the first pathway-specific reaction of the sterol branch of the isoprenoid pathway.; squalene synthase 1 (SQS1); FUNCTIONS IN: farnesyl-diphosphate farnesyltransferase activity; INVOLVED IN: sterol biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site (InterPro:IPR019845), Terpenoid synthase (InterPro:IPR008949), Farnesyl-diphosphate farnesyltransferase (InterPro:IPR006449), Squalene/phytoene synthase (InterPro:IPR002060); BEST Arabidopsis thaliana protein match is: squalene synthase 2 (TAIR:AT4G34650.1); Has 1469 Blast hits to 1468 proteins in 521 species: Archae - 28; Bacteria - 581; Metazoa - 114; Fungi - 174; Plants - 415; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|36672 : 441.0) no description available & (gnl|cdd|64362 : 271.0) no description available & (reliability: 1108.0) & (original description: Putative sqs, Description = Squalene synthase, PFAM = PF00494)' T '11.8.10' 'lipid metabolism.'exotics' (steroids, squalene etc).phosphatidylcholinesterol O-acyltransferase' 'nbv0.3scaffold43831_5080-12029' '(at3g44830 : 869.0) Lecithin:cholesterol acyltransferase family protein; FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); BEST Arabidopsis thaliana protein match is: phospholipid:diacylglycerol acyltransferase (TAIR:AT5G13640.1); Has 743 Blast hits to 672 proteins in 235 species: Archae - 0; Bacteria - 21; Metazoa - 207; Fungi - 173; Plants - 213; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|37580 : 282.0) no description available & (gnl|cdd|66167 : 124.0) no description available & (reliability: 1738.0) & (original description: Putative PDAT2, Description = Putative phospholipid:diacylglycerol acyltransferase 2, PFAM = PF02450)' T '11.8.10' 'lipid metabolism.'exotics' (steroids, squalene etc).phosphatidylcholinesterol O-acyltransferase' 'nbv0.3scaffold45516_5135-15290' '(at5g13640 : 1042.0) arabidopsis phospholipid:diacylglycerol acyltransferase (PDAT); phospholipid:diacylglycerol acyltransferase (PDAT); FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity, phospholipid:diacylglycerol acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endoplasmic reticulum, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); BEST Arabidopsis thaliana protein match is: Lecithin:cholesterol acyltransferase family protein (TAIR:AT3G44830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37580 : 303.0) no description available & (gnl|cdd|66167 : 118.0) no description available & (reliability: 2084.0) & (original description: Putative PDAT1, Description = Phospholipid:diacylglycerol acyltransferase 1, PFAM = PF02450)' T '11.8.10' 'lipid metabolism.'exotics' (steroids, squalene etc).phosphatidylcholinesterol O-acyltransferase' 'niben101scf00736_153449-161258' '(at5g13640 : 1052.0) arabidopsis phospholipid:diacylglycerol acyltransferase (PDAT); phospholipid:diacylglycerol acyltransferase (PDAT); FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity, phospholipid:diacylglycerol acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endoplasmic reticulum, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); BEST Arabidopsis thaliana protein match is: Lecithin:cholesterol acyltransferase family protein (TAIR:AT3G44830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37580 : 310.0) no description available & (gnl|cdd|66167 : 128.0) no description available & (reliability: 2104.0) & (original description: Putative PDAT1, Description = Phospholipid:diacylglycerol acyltransferase 1, PFAM = PF02450)' T '11.8.10' 'lipid metabolism.'exotics' (steroids, squalene etc).phosphatidylcholinesterol O-acyltransferase' 'niben101scf00870_1459946-1466094' '(at5g13640 : 1003.0) arabidopsis phospholipid:diacylglycerol acyltransferase (PDAT); phospholipid:diacylglycerol acyltransferase (PDAT); FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity, phospholipid:diacylglycerol acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endoplasmic reticulum, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); BEST Arabidopsis thaliana protein match is: Lecithin:cholesterol acyltransferase family protein (TAIR:AT3G44830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37580 : 299.0) no description available & (gnl|cdd|66167 : 121.0) no description available & (reliability: 2006.0) & (original description: Putative pdat2, Description = Phospholipid:diacylglycerol acyltransferase 1, PFAM = PF02450;PF02450)' T '11.8.10' 'lipid metabolism.'exotics' (steroids, squalene etc).phosphatidylcholinesterol O-acyltransferase' 'niben101scf02174_135893-144023' '(at4g19860 : 725.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); BEST Arabidopsis thaliana protein match is: lecithin:cholesterol acyltransferase 3 (TAIR:AT3G03310.1); Has 596 Blast hits to 589 proteins in 168 species: Archae - 2; Bacteria - 89; Metazoa - 166; Fungi - 41; Plants - 181; Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink). & (gnl|cdd|37580 : 219.0) no description available & (gnl|cdd|66167 : 91.6) no description available & (reliability: 1450.0) & (original description: Putative LCAT4, Description = Lecithin-cholesterol acyltransferase-like 4, PFAM = PF02450)' T '11.8.10' 'lipid metabolism.'exotics' (steroids, squalene etc).phosphatidylcholinesterol O-acyltransferase' 'niben101scf02425_155756-164016' '(at5g13640 : 1057.0) arabidopsis phospholipid:diacylglycerol acyltransferase (PDAT); phospholipid:diacylglycerol acyltransferase (PDAT); FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity, phospholipid:diacylglycerol acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endoplasmic reticulum, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); BEST Arabidopsis thaliana protein match is: Lecithin:cholesterol acyltransferase family protein (TAIR:AT3G44830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37580 : 311.0) no description available & (gnl|cdd|66167 : 129.0) no description available & (reliability: 2114.0) & (original description: Putative PDAT1, Description = Phospholipid:diacylglycerol acyltransferase 1, PFAM = PF02450;PF02450)' T '11.8.10' 'lipid metabolism.'exotics' (steroids, squalene etc).phosphatidylcholinesterol O-acyltransferase' 'niben101scf03973_45373-50886' '(at3g44830 : 914.0) Lecithin:cholesterol acyltransferase family protein; FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); BEST Arabidopsis thaliana protein match is: phospholipid:diacylglycerol acyltransferase (TAIR:AT5G13640.1); Has 743 Blast hits to 672 proteins in 235 species: Archae - 0; Bacteria - 21; Metazoa - 207; Fungi - 173; Plants - 213; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|37580 : 301.0) no description available & (gnl|cdd|66167 : 133.0) no description available & (reliability: 1828.0) & (original description: Putative PDAT2, Description = Putative phospholipid:diacylglycerol acyltransferase 2, PFAM = PF02450;PF02450)' T '11.8.10' 'lipid metabolism.'exotics' (steroids, squalene etc).phosphatidylcholinesterol O-acyltransferase' 'niben101scf04691_37427-51891' '(at3g03310 : 610.0) lecithin:cholesterol acyltransferase 3 (LCAT3); FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G19860.1); Has 560 Blast hits to 555 proteins in 155 species: Archae - 2; Bacteria - 82; Metazoa - 189; Fungi - 22; Plants - 147; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|37580 : 245.0) no description available & (gnl|cdd|66167 : 87.0) no description available & (reliability: 1220.0) & (original description: Putative LCAT3, Description = Phospholipase A(1) LCAT3, PFAM = PF02450)' T '11.8.10' 'lipid metabolism.'exotics' (steroids, squalene etc).phosphatidylcholinesterol O-acyltransferase' 'niben101scf07797_394576-398838' '(at1g27480 : 511.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); Has 1076 Blast hits to 1070 proteins in 248 species: Archae - 0; Bacteria - 41; Metazoa - 667; Fungi - 0; Plants - 226; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (gnl|cdd|37580 : 250.0) no description available & (gnl|cdd|66167 : 165.0) no description available & (reliability: 1022.0) & (original description: Putative LCAT1, Description = Lecithin-cholesterol acyltransferase-like 1, PFAM = PF02450)' T '11.8.10' 'lipid metabolism.'exotics' (steroids, squalene etc).phosphatidylcholinesterol O-acyltransferase' 'niben101scf08738_29589-38732' '(at5g13640 : 1052.0) arabidopsis phospholipid:diacylglycerol acyltransferase (PDAT); phospholipid:diacylglycerol acyltransferase (PDAT); FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity, phospholipid:diacylglycerol acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endoplasmic reticulum, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); BEST Arabidopsis thaliana protein match is: Lecithin:cholesterol acyltransferase family protein (TAIR:AT3G44830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37580 : 305.0) no description available & (gnl|cdd|66167 : 120.0) no description available & (reliability: 2104.0) & (original description: Putative PDAT1, Description = Phospholipid:diacylglycerol acyltransferase 1, PFAM = PF02450)' T '11.8.10' 'lipid metabolism.'exotics' (steroids, squalene etc).phosphatidylcholinesterol O-acyltransferase' 'niben101scf13185_266233-296385' '(at1g04010 : 1043.0) phospholipid sterol acyl transferase 1 (PSAT1); CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); BEST Arabidopsis thaliana protein match is: phospholipid:diacylglycerol acyltransferase (TAIR:AT5G13640.1); Has 615 Blast hits to 606 proteins in 192 species: Archae - 0; Bacteria - 2; Metazoa - 241; Fungi - 118; Plants - 150; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|66167 : 288.0) no description available & (gnl|cdd|37580 : 278.0) no description available & (reliability: 2086.0) & (original description: Putative PSAT, Description = Phospholipid--sterol O-acyltransferase, PFAM = PF02450)' T '11.8.1001' 'lipid metabolism.'exotics' (steroids, squalene etc)' 'stigmasterol' 'secondary metabolism, steroids' M '11.8.1002' 'lipid metabolism.'exotics' (steroids, squalene etc)' 'stigmastanol' 'secondary metabolism, steroids' M '11.8.1003' 'lipid metabolism.'exotics' (steroids, squalene etc)' 'stigmasterol acetate' 'secondary metabolism, steroids' M '11.8.1004' 'lipid metabolism.'exotics' (steroids, squalene etc)' 'stigmastadienone' 'secondary metabolism, steroids' M '11.8.1005' 'lipid metabolism.'exotics' (steroids, squalene etc)' 'lanosterol' 'secondary metabolism, steroids' M '11.8.1006' 'lipid metabolism.'exotics' (steroids, squalene etc)' 'ergosterol' 'secondary metabolism, steroids' M '11.8.1007' 'lipid metabolism.'exotics' (steroids, squalene etc)' 'cholesteryl oleate' 'secondary metabolism, steroids' M '11.8.1008' 'lipid metabolism.'exotics' (steroids, squalene etc)' 'oleanolate' 'secondary metabolism, steroids' M '11.8.1009' 'lipid metabolism.'exotics' (steroids, squalene etc)' 'ursolate' 'secondary metabolism, steroids' M '11.8.1010' 'lipid metabolism.'exotics' (steroids, squalene etc)' 'cholesterol' 'secondary metabolism, steroids' M '11.8.1011' 'lipid metabolism.'exotics' (steroids, squalene etc)' 'fucosterol' 'secondary metabolism, steroids' M '11.8.1012' 'lipid metabolism.'exotics' (steroids, squalene etc)' '5-alpha-cholestane' 'secondary metabolism, steroids' M '11.8.1013' 'lipid metabolism.'exotics' (steroids, squalene etc)' 'digoxin' 'secondary metabolism; from Digitalis (foxglove plant)' M '11.9' 'lipid metabolism.lipid degradation' 'niben044scf00004782ctg003_19002-23283' '(at4g28570 : 801.0) Long-chain fatty alcohol dehydrogenase family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867), Long-chain fatty alcohol dehydrogenase (InterPro:IPR012400); BEST Arabidopsis thaliana protein match is: Long-chain fatty alcohol dehydrogenase family protein (TAIR:AT1G03990.1); Has 3734 Blast hits to 3404 proteins in 773 species: Archae - 46; Bacteria - 2451; Metazoa - 41; Fungi - 246; Plants - 166; Viruses - 0; Other Eukaryotes - 784 (source: NCBI BLink). & (gnl|cdd|84990 : 245.0) no description available & (reliability: 1476.0) & (original description: Putative FAO2, Description = Long-chain-alcohol oxidase FAO2, PFAM = PF00732;PF05199)' T '11.9' 'lipid metabolism.lipid degradation' 'niben101scf00367_368008-374044' '(at3g23410 : 804.0) Encodes a fatty alcohol oxidase.; fatty alcohol oxidase 3 (FAO3); CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867), Long-chain fatty alcohol dehydrogenase (InterPro:IPR012400); BEST Arabidopsis thaliana protein match is: Long-chain fatty alcohol dehydrogenase family protein (TAIR:AT4G28570.1); Has 3017 Blast hits to 2907 proteins in 684 species: Archae - 34; Bacteria - 1847; Metazoa - 52; Fungi - 221; Plants - 173; Viruses - 0; Other Eukaryotes - 690 (source: NCBI BLink). & (gnl|cdd|84990 : 263.0) no description available & (reliability: 1608.0) & (original description: Putative FAO1, Description = Long-chain-alcohol oxidase FAO1, PFAM = PF00732;PF05199)' T '11.9' 'lipid metabolism.lipid degradation' 'niben101scf13185_79139-83888' '(at4g28570 : 810.0) Long-chain fatty alcohol dehydrogenase family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867), Long-chain fatty alcohol dehydrogenase (InterPro:IPR012400); BEST Arabidopsis thaliana protein match is: Long-chain fatty alcohol dehydrogenase family protein (TAIR:AT1G03990.1); Has 3734 Blast hits to 3404 proteins in 773 species: Archae - 46; Bacteria - 2451; Metazoa - 41; Fungi - 246; Plants - 166; Viruses - 0; Other Eukaryotes - 784 (source: NCBI BLink). & (gnl|cdd|84990 : 250.0) no description available & (reliability: 1490.0) & (original description: Putative FAO2, Description = Long-chain-alcohol oxidase FAO2, PFAM = PF00732;PF05199)' T '11.9.1' 'lipid metabolism.lipid degradation.palmitoyl[protein] hydrolase' 'nbv0.5scaffold1425_392168-453839' '(at3g60340 : 449.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: palmitoyl-(protein) hydrolase activity; INVOLVED IN: protein modification process; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Palmitoyl protein thioesterase (InterPro:IPR002472); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G47330.1); Has 611 Blast hits to 607 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 315; Fungi - 98; Plants - 140; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|37752 : 394.0) no description available & (gnl|cdd|65841 : 149.0) no description available & (reliability: 898.0) & (original description: Putative PPTE, Description = Palmitoyl protein thioesterase family protein, PFAM = PF02089;PF02089)' T '11.9.1' 'lipid metabolism.lipid degradation.palmitoyl[protein] hydrolase' 'niben044scf00014327ctg007_1-2998' '(at3g60340 : 111.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: palmitoyl-(protein) hydrolase activity; INVOLVED IN: protein modification process; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Palmitoyl protein thioesterase (InterPro:IPR002472); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G47330.1); Has 611 Blast hits to 607 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 315; Fungi - 98; Plants - 140; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|37752 : 105.0) no description available & (reliability: 222.0) & (original description: Putative PPTE, Description = Palmitoyl protein thioesterase family protein, PFAM = )' T '11.9.1' 'lipid metabolism.lipid degradation.palmitoyl[protein] hydrolase' 'niben101scf00863_495028-500121' '(at3g60340 : 328.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: palmitoyl-(protein) hydrolase activity; INVOLVED IN: protein modification process; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Palmitoyl protein thioesterase (InterPro:IPR002472); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G47330.1); Has 611 Blast hits to 607 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 315; Fungi - 98; Plants - 140; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|37752 : 323.0) no description available & (gnl|cdd|65841 : 129.0) no description available & (reliability: 656.0) & (original description: Putative PPTE, Description = Palmitoyl protein thioesterase family protein, PFAM = PF02089)' T '11.9.1' 'lipid metabolism.lipid degradation.palmitoyl[protein] hydrolase' 'niben101scf01123_13610-19098' '(at3g60340 : 346.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: palmitoyl-(protein) hydrolase activity; INVOLVED IN: protein modification process; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Palmitoyl protein thioesterase (InterPro:IPR002472); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G47330.1); Has 611 Blast hits to 607 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 315; Fungi - 98; Plants - 140; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|37752 : 334.0) no description available & (gnl|cdd|65841 : 139.0) no description available & (reliability: 692.0) & (original description: Putative PPTE, Description = Palmitoyl protein thioesterase family protein, PFAM = PF02089)' T '11.9.1' 'lipid metabolism.lipid degradation.palmitoyl[protein] hydrolase' 'niben101scf05028_145170-156727' '(gnl|cdd|37752 : 336.0) no description available & (at3g60340 : 335.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: palmitoyl-(protein) hydrolase activity; INVOLVED IN: protein modification process; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Palmitoyl protein thioesterase (InterPro:IPR002472); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G47330.1); Has 611 Blast hits to 607 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 315; Fungi - 98; Plants - 140; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|65841 : 145.0) no description available & (reliability: 670.0) & (original description: Putative BnaAnng23510D, Description = BnaAnng23510D protein, PFAM = PF02089)' T '11.9.1' 'lipid metabolism.lipid degradation.palmitoyl[protein] hydrolase' 'niben101scf05855_177788-184166' '(at3g60340 : 413.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: palmitoyl-(protein) hydrolase activity; INVOLVED IN: protein modification process; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Palmitoyl protein thioesterase (InterPro:IPR002472); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G47330.1); Has 611 Blast hits to 607 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 315; Fungi - 98; Plants - 140; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|37752 : 381.0) no description available & (gnl|cdd|65841 : 162.0) no description available & (reliability: 826.0) & (original description: Putative PPTE, Description = Palmitoyl protein thioesterase, PFAM = PF02089)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'nbv0.3scaffold6618_8190-21065' '(at1g28580 : 350.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G28570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 314.0) no description available & (q7y1x1|est_hevbr : 175.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 652.0) & (original description: Putative At1g28570, Description = GDSL esterase/lipase At1g28570, PFAM = PF00657)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'nbv0.3scaffold6618_10469-21098' '(at1g28580 : 350.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G28570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 313.0) no description available & (q7y1x1|est_hevbr : 175.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 652.0) & (original description: Putative BnaA07g08280D, Description = BnaA07g08280D protein, PFAM = PF00657)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'nbv0.3scaffold7193_2698-13472' '(at1g73920 : 874.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G18460.1); Has 1707 Blast hits to 1690 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 1166; Fungi - 276; Plants - 162; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|37835 : 302.0) no description available & (reliability: 1748.0) & (original description: Putative LIPG1, Description = Carboxylic ester hydrolase/lipase, PFAM = PF04083)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'nbv0.3scaffold31408_631-6430' '(at2g39420 : 439.0) alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G39410.2); Has 4720 Blast hits to 4720 proteins in 1453 species: Archae - 32; Bacteria - 3497; Metazoa - 120; Fungi - 143; Plants - 476; Viruses - 35; Other Eukaryotes - 417 (source: NCBI BLink). & (gnl|cdd|36668 : 427.0) no description available & (gnl|cdd|32448 : 143.0) no description available & (reliability: 830.0) & (original description: Putative At2g39420, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12146)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'nbv0.3scaffold36784_2903-11850' '(at5g18640 : 450.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18630.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39769 : 186.0) no description available & (gnl|cdd|73213 : 168.0) no description available & (reliability: 900.0) & (original description: Putative lipase, Description = Lipase, PFAM = PF01764)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'nbv0.5scaffold1631_419490-422590' '(gnl|cdd|58514 : 271.0) no description available & (at1g28590 : 267.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G27360.1); Has 3435 Blast hits to 3386 proteins in 204 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 4; Plants - 3124; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (q7y1x1|est_hevbr : 148.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 500.0) & (original description: Putative cgt, Description = SGNH hydrolase-type esterase superfamily protein, putative, PFAM = PF00657)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'nbv0.5scaffold3790_134364-137416' '(gnl|cdd|58514 : 162.0) no description available & (at1g28650 : 159.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28670.1); Has 3414 Blast hits to 3364 proteins in 185 species: Archae - 0; Bacteria - 266; Metazoa - 0; Fungi - 2; Plants - 3141; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = )' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'nbv0.5scaffold6004_78313-94287' '(gnl|cdd|58514 : 279.0) no description available & (at5g03980 : 268.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7y1x1|est_hevbr : 148.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 504.0) & (original description: Putative cgt, Description = GDSL lipase-like chlorogenate-dependent caffeoyltransferase, PFAM = PF00657)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'nbv0.5scaffold6617_29570-32691' '(gnl|cdd|58514 : 169.0) no description available & (at1g28670 : 162.0) Arabidopsis thaliana lipase; ARAB-1; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28660.1); Has 3359 Blast hits to 3311 proteins in 183 species: Archae - 0; Bacteria - 261; Metazoa - 0; Fungi - 0; Plants - 3095; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q7y1x1|est_hevbr : 80.1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 324.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = PF00657)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben044scf00005803ctg004_2570-6254' '(at2g42690 : 488.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G18550.1); Has 772 Blast hits to 765 proteins in 118 species: Archae - 0; Bacteria - 26; Metazoa - 4; Fungi - 158; Plants - 461; Viruses - 1; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|39769 : 113.0) no description available & (gnl|cdd|85661 : 93.8) no description available & (reliability: 976.0) & (original description: Putative At2g42690, Description = Phospholipase A1-IIdelta, PFAM = PF01764)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben044scf00007218ctg001_3333-6309' '(at1g28650 : 161.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28670.1); Has 3414 Blast hits to 3364 proteins in 185 species: Archae - 0; Bacteria - 266; Metazoa - 0; Fungi - 2; Plants - 3141; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|58514 : 161.0) no description available & (reliability: 322.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = )' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben044scf00007970ctg007_1447-12982' '(at2g44970 : 620.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: intracellular protein transport, GPI anchor metabolic process; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PGAP1-like (InterPro:IPR012908); Has 178 Blast hits to 178 proteins in 61 species: Archae - 0; Bacteria - 72; Metazoa - 0; Fungi - 4; Plants - 92; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 1240.0) & (original description: Putative At2g44970, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = )' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben044scf00012848ctg003_9214-18232' '(at5g18630 : 394.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18640.1); Has 2101 Blast hits to 2100 proteins in 395 species: Archae - 0; Bacteria - 476; Metazoa - 111; Fungi - 453; Plants - 678; Viruses - 12; Other Eukaryotes - 371 (source: NCBI BLink). & (gnl|cdd|39769 : 162.0) no description available & (gnl|cdd|73213 : 140.0) no description available & (reliability: 788.0) & (original description: Putative lipase, Description = Triacylglycerol lipase, PFAM = PF01764)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf00416_571369-574493' '(at5g03980 : 296.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 288.0) no description available & (q7y1x1|est_hevbr : 162.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 534.0) & (original description: Putative cgt, Description = SGNH hydrolase-type esterase superfamily protein, putative, PFAM = PF00657)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf00449_74326-84641' '(at2g39420 : 397.0) alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G39410.2); Has 4720 Blast hits to 4720 proteins in 1453 species: Archae - 32; Bacteria - 3497; Metazoa - 120; Fungi - 143; Plants - 476; Viruses - 35; Other Eukaryotes - 417 (source: NCBI BLink). & (gnl|cdd|36668 : 391.0) no description available & (gnl|cdd|32448 : 127.0) no description available & (reliability: 750.0) & (original description: Putative At2g39420, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12146)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf01228_173307-183445' '(at1g28570 : 199.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 171.0) no description available & (q7y1x1|est_hevbr : 89.4) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 360.0) & (original description: Putative pco061737, Description = GDSL esterase/lipase At5g45910 family, PFAM = PF00657)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf01438_65896-69017' '(gnl|cdd|58514 : 293.0) no description available & (at1g28570 : 271.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7y1x1|est_hevbr : 152.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 498.0) & (original description: Putative AAE, Description = Acetylajmalan esterase, PFAM = PF00657)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf01670_224245-245923' '(gnl|cdd|58514 : 267.0) no description available & (at5g03980 : 258.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7y1x1|est_hevbr : 141.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 470.0) & (original description: Putative cgt, Description = GDSL lipase-like chlorogenate-dependent caffeoyltransferase, PFAM = PF00657)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf01681_351124-354254' '(gnl|cdd|58514 : 270.0) no description available & (at1g28640 : 269.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28670.1); Has 3448 Blast hits to 3401 proteins in 207 species: Archae - 0; Bacteria - 321; Metazoa - 0; Fungi - 6; Plants - 3118; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q7y1x1|est_hevbr : 135.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 518.0) & (original description: Putative cgt, Description = SGNH hydrolase-type esterase superfamily protein, putative, PFAM = PF00657)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf02406_84429-87626' '(gnl|cdd|58514 : 162.0) no description available & (at5g03980 : 150.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = PF00657)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf02408_203674-206798' '(gnl|cdd|58514 : 169.0) no description available & (at1g28650 : 164.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28670.1); Has 3414 Blast hits to 3364 proteins in 185 species: Archae - 0; Bacteria - 266; Metazoa - 0; Fungi - 2; Plants - 3141; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (q7y1x1|est_hevbr : 86.7) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 328.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = PF00657)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf02752_404909-422275' '(at5g18640 : 462.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18630.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39769 : 190.0) no description available & (gnl|cdd|73213 : 171.0) no description available & (reliability: 924.0) & (original description: Putative lipase, Description = Triacylglycerol lipase, PFAM = PF01764)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf02752_405204-421771' '(at5g18630 : 449.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18640.1); Has 2101 Blast hits to 2100 proteins in 395 species: Archae - 0; Bacteria - 476; Metazoa - 111; Fungi - 453; Plants - 678; Viruses - 12; Other Eukaryotes - 371 (source: NCBI BLink). & (gnl|cdd|39769 : 188.0) no description available & (gnl|cdd|73213 : 170.0) no description available & (reliability: 898.0) & (original description: Putative lipase, Description = Lipase, PFAM = PF01764)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf02869_1239223-1250296' '(at1g28580 : 300.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G28570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 300.0) no description available & (q7y1x1|est_hevbr : 125.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 548.0) & (original description: Putative Os05g0209600, Description = Os05g0209600 protein, PFAM = PF00657)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf03023_415758-423810' '(at1g28590 : 386.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G27360.1); Has 3435 Blast hits to 3386 proteins in 204 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 4; Plants - 3124; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|58514 : 331.0) no description available & (q7y1x1|est_hevbr : 153.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 708.0) & (original description: Putative At1g28600, Description = GDSL esterase/lipase At1g28600, PFAM = PF00657)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf03300_575441-578687' '(at5g03980 : 162.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 162.0) no description available & (q7y1x1|est_hevbr : 83.2) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 318.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = PF00657)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf03497_970503-973630' '(gnl|cdd|58514 : 279.0) no description available & (at1g28640 : 260.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28670.1); Has 3448 Blast hits to 3401 proteins in 207 species: Archae - 0; Bacteria - 321; Metazoa - 0; Fungi - 6; Plants - 3118; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q7y1x1|est_hevbr : 145.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 508.0) & (original description: Putative cgt, Description = GDSL lipase-like chlorogenate-dependent caffeoyltransferase, PFAM = PF00657)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf03497_1024418-1027548' '(gnl|cdd|58514 : 289.0) no description available & (at1g28570 : 268.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7y1x1|est_hevbr : 145.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 498.0) & (original description: Putative AAE, Description = Acetylajmalan esterase, PFAM = PF00657)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf04820_131478-136108' '(at1g52760 : 534.0) Encodes a lysophospholipase 2 (LysoPL2). Involved in tolerance to cadmium-induced oxidative stress. Binds Acyl-CoA-binding protein 2 (ACBP2).; lysophospholipase 2 (LysoPL2); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G11090.1); Has 2373 Blast hits to 2373 proteins in 808 species: Archae - 32; Bacteria - 1418; Metazoa - 106; Fungi - 99; Plants - 433; Viruses - 39; Other Eukaryotes - 246 (source: NCBI BLink). & (gnl|cdd|36668 : 361.0) no description available & (gnl|cdd|32448 : 122.0) no description available & (reliability: 1068.0) & (original description: Putative CSE, Description = Caffeoylshikimate esterase, PFAM = PF12146)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf05731_32930-36030' '(at1g28590 : 285.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G27360.1); Has 3435 Blast hits to 3386 proteins in 204 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 4; Plants - 3124; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|58514 : 278.0) no description available & (q7y1x1|est_hevbr : 160.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 518.0) & (original description: Putative cgt, Description = SGNH hydrolase-type esterase superfamily protein, putative, PFAM = PF00657)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf06909_408549-411688' '(at1g28590 : 289.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G27360.1); Has 3435 Blast hits to 3386 proteins in 204 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 4; Plants - 3124; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|58514 : 284.0) no description available & (q7y1x1|est_hevbr : 167.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 536.0) & (original description: Putative AAE, Description = Acetylajmalan esterase, PFAM = PF00657)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf09150_209540-217359' '(at5g18640 : 467.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18630.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39769 : 186.0) no description available & (gnl|cdd|73213 : 175.0) no description available & (reliability: 934.0) & (original description: Putative lipase, Description = Triacylglycerol lipase, PFAM = PF01764)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf09559_21765-25243' '(at2g42690 : 493.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G18550.1); Has 772 Blast hits to 765 proteins in 118 species: Archae - 0; Bacteria - 26; Metazoa - 4; Fungi - 158; Plants - 461; Viruses - 1; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|39769 : 119.0) no description available & (gnl|cdd|85661 : 100.0) no description available & (reliability: 986.0) & (original description: Putative At2g42690, Description = Phospholipase A1-IIdelta, PFAM = PF01764)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf09575_189933-202951' '(at2g44970 : 611.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: intracellular protein transport, GPI anchor metabolic process; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PGAP1-like (InterPro:IPR012908); Has 178 Blast hits to 178 proteins in 61 species: Archae - 0; Bacteria - 72; Metazoa - 0; Fungi - 4; Plants - 92; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 1222.0) & (original description: Putative At2g44970, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = )' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf09751_155409-161953' '(at2g44970 : 479.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: intracellular protein transport, GPI anchor metabolic process; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PGAP1-like (InterPro:IPR012908); Has 178 Blast hits to 178 proteins in 61 species: Archae - 0; Bacteria - 72; Metazoa - 0; Fungi - 4; Plants - 92; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 958.0) & (original description: Putative TCM_037814, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = )' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf11009_189302-192414' '(gnl|cdd|58514 : 282.0) no description available & (at5g03980 : 254.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7y1x1|est_hevbr : 153.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 490.0) & (original description: Putative AAE, Description = Acetylajmalan esterase, PFAM = PF00657)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf12983_223795-226943' '(gnl|cdd|58514 : 156.0) no description available & (at1g28640 : 146.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28670.1); Has 3448 Blast hits to 3401 proteins in 207 species: Archae - 0; Bacteria - 321; Metazoa - 0; Fungi - 6; Plants - 3118; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = )' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf15077_6787-9356' '(at1g52760 : 296.0) Encodes a lysophospholipase 2 (LysoPL2). Involved in tolerance to cadmium-induced oxidative stress. Binds Acyl-CoA-binding protein 2 (ACBP2).; lysophospholipase 2 (LysoPL2); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G11090.1); Has 2373 Blast hits to 2373 proteins in 808 species: Archae - 32; Bacteria - 1418; Metazoa - 106; Fungi - 99; Plants - 433; Viruses - 39; Other Eukaryotes - 246 (source: NCBI BLink). & (gnl|cdd|36668 : 179.0) no description available & (reliability: 592.0) & (original description: Putative CSE, Description = Monoacylglycerol acyltransferase, PFAM = PF12146)' T '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'niben101scf16660_237358-246057' '(at1g73920 : 863.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G18460.1); Has 1707 Blast hits to 1690 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 1166; Fungi - 276; Plants - 162; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|37835 : 288.0) no description available & (reliability: 1726.0) & (original description: Putative BnaA08g29390D, Description = BnaA08g29390D protein, PFAM = PF04083)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.3scaffold5959_3271-20416' '(at4g13550 : 682.0) triglyceride lipases;triglyceride lipases; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18640.1); Has 2190 Blast hits to 2187 proteins in 383 species: Archae - 0; Bacteria - 476; Metazoa - 135; Fungi - 440; Plants - 705; Viruses - 12; Other Eukaryotes - 422 (source: NCBI BLink). & (gnl|cdd|73213 : 155.0) no description available & (gnl|cdd|39769 : 126.0) no description available & (reliability: 1364.0) & (original description: Putative At4g13550, Description = Putative triglyceride lipase, PFAM = PF01764;PF00168)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.3scaffold6470_5820-12313' '(at3g07400 : 480.0) lipase class 3 family protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); Has 393 Blast hits to 389 proteins in 69 species: Archae - 0; Bacteria - 12; Metazoa - 12; Fungi - 52; Plants - 275; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 960.0) & (original description: Putative At3g07400, Description = Lipase class 3 family protein, PFAM = )' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.3scaffold7193_2698-13472' '(at1g73920 : 874.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G18460.1); Has 1707 Blast hits to 1690 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 1166; Fungi - 276; Plants - 162; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|37835 : 302.0) no description available & (reliability: 1730.0) & (original description: Putative LIPG1, Description = Carboxylic ester hydrolase/lipase, PFAM = PF04083)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.3scaffold8176_807-11999' '(at2g15230 : 441.0) Lipase active on medium and short chain triacylglycerols, but not on phospho- or galactolipids. Active between pH4 and 7 with an optimum at pH6. Knock-out mutant has not obvious phenotype. Predicted to be extracellular.; lipase 1 (LIP1); CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Myzus persicae-induced lipase 1 (TAIR:AT5G14180.1); Has 1912 Blast hits to 1877 proteins in 247 species: Archae - 0; Bacteria - 112; Metazoa - 1231; Fungi - 287; Plants - 167; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37835 : 241.0) no description available & (reliability: 882.0) & (original description: Putative LIP1, Description = Lipase, PFAM = PF00561)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.3scaffold23715_16484-20073' '(at4g16820 : 570.0) Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.; alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: sperm cell, cultured cell; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G44810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39769 : 186.0) no description available & (gnl|cdd|73213 : 142.0) no description available & (reliability: 1140.0) & (original description: Putative At4g16820, Description = Phospholipase A1-Ibeta2, chloroplastic, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.3scaffold30395_685-4283' '(at4g16820 : 521.0) Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.; alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: sperm cell, cultured cell; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G44810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39769 : 192.0) no description available & (gnl|cdd|73213 : 146.0) no description available & (reliability: 1042.0) & (original description: Putative Os02g0653900, Description = DAD-1, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.3scaffold36436_8378-13978' '(at3g14360 : 562.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G42930.1); Has 1400 Blast hits to 1392 proteins in 294 species: Archae - 0; Bacteria - 352; Metazoa - 56; Fungi - 304; Plants - 428; Viruses - 0; Other Eukaryotes - 260 (source: NCBI BLink). & (gnl|cdd|39769 : 112.0) no description available & (gnl|cdd|73213 : 102.0) no description available & (reliability: 1124.0) & (original description: Putative TAL4, Description = Triacylglycerol acidic lipase TAL4, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.3scaffold80052_1080-6193' '(at1g02660 : 582.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G62590.1); Has 747 Blast hits to 737 proteins in 148 species: Archae - 0; Bacteria - 27; Metazoa - 209; Fungi - 146; Plants - 175; Viruses - 15; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|73213 : 119.0) no description available & (reliability: 1164.0) & (original description: Putative At1g02660, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.5scaffold1034_80182-89277' '(at5g14180 : 516.0) Myzus persicae-induced lipase 1 (MPL1); FUNCTIONS IN: catalytic activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: lipase 1 (TAIR:AT2G15230.1); Has 1911 Blast hits to 1879 proteins in 244 species: Archae - 0; Bacteria - 109; Metazoa - 1225; Fungi - 283; Plants - 181; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|37835 : 333.0) no description available & (reliability: 1032.0) & (original description: Putative LIP2, Description = Triacylglycerol lipase 2, PFAM = PF12146;PF04083)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.5scaffold1225_75387-79763' '(at5g42930 : 414.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G56630.1); Has 1515 Blast hits to 1509 proteins in 328 species: Archae - 0; Bacteria - 466; Metazoa - 48; Fungi - 299; Plants - 385; Viruses - 5; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|73213 : 146.0) no description available & (gnl|cdd|39769 : 136.0) no description available & (reliability: 828.0) & (original description: Putative TAL3, Description = Triacylglycerol acidic lipase TAL3, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.5scaffold1312_186939-208783' '(at2g42450 : 565.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3 (TAIR:AT3G14075.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37299 : 159.0) no description available & (gnl|cdd|73213 : 125.0) no description available & (reliability: 1130.0) & (original description: Putative BnaC04g52720D, Description = BnaC04g52720D protein, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.5scaffold1846_373394-400611' '(at3g07400 : 1099.0) lipase class 3 family protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); Has 393 Blast hits to 389 proteins in 69 species: Archae - 0; Bacteria - 12; Metazoa - 12; Fungi - 52; Plants - 275; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 2198.0) & (original description: Putative BnaC05g44540D, Description = BnaC05g44540D protein, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.5scaffold2867_209408-212784' '(at1g05800 : 508.0) Encodes a galactolipase. Located in the chloroplast. Involved in the initial step of jasmonic acid biosynthesis. Expressed in vegetative tissues and is necessary for the biosynthesis of basal-level JAs in vegetative tissues.; DONGLE (DGL); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G31690.1); Has 1183 Blast hits to 1177 proteins in 252 species: Archae - 0; Bacteria - 234; Metazoa - 21; Fungi - 238; Plants - 544; Viruses - 3; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|39769 : 192.0) no description available & (gnl|cdd|73213 : 137.0) no description available & (reliability: 1016.0) & (original description: Putative DGL, Description = Galactolipase DONGLE, chloroplastic, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.5scaffold6332_39940-45661' '(at1g56630 : 140.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G42930.1); Has 1532 Blast hits to 1526 proteins in 353 species: Archae - 0; Bacteria - 521; Metazoa - 41; Fungi - 272; Plants - 392; Viruses - 3; Other Eukaryotes - 303 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative PGSC0003DMG400007965, Description = Alpha/beta-Hydrolases superfamily protein, putative, PFAM = )' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'nbv0.5scaffold8641_1-14858' '(at5g14180 : 351.0) Myzus persicae-induced lipase 1 (MPL1); FUNCTIONS IN: catalytic activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: lipase 1 (TAIR:AT2G15230.1); Has 1911 Blast hits to 1879 proteins in 244 species: Archae - 0; Bacteria - 109; Metazoa - 1225; Fungi - 283; Plants - 181; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|37835 : 257.0) no description available & (reliability: 702.0) & (original description: Putative LIP1, Description = Lipase, PFAM = PF00561)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben044scf00000414ctg019_2736-4644' '(at4g18550 : 240.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06250.1); Has 1222 Blast hits to 1214 proteins in 260 species: Archae - 0; Bacteria - 234; Metazoa - 8; Fungi - 231; Plants - 573; Viruses - 1; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|39769 : 109.0) no description available & (gnl|cdd|85661 : 92.7) no description available & (reliability: 480.0) & (original description: Putative EEF53, Description = EEF53 protein, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben044scf00003063ctg002_1761-8110' '(at5g42930 : 421.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G56630.1); Has 1515 Blast hits to 1509 proteins in 328 species: Archae - 0; Bacteria - 466; Metazoa - 48; Fungi - 299; Plants - 385; Viruses - 5; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|73213 : 157.0) no description available & (gnl|cdd|39769 : 143.0) no description available & (reliability: 842.0) & (original description: Putative TAL3, Description = Triacylglycerol acidic lipase TAL3, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben044scf00005848ctg016_3261-8354' '(at1g02660 : 589.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G62590.1); Has 747 Blast hits to 737 proteins in 148 species: Archae - 0; Bacteria - 27; Metazoa - 209; Fungi - 146; Plants - 175; Viruses - 15; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|73213 : 118.0) no description available & (reliability: 1178.0) & (original description: Putative At1g02660, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben044scf00007194ctg009_1-3687' '(at2g30550 : 536.0) Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.; alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06800.1); Has 1575 Blast hits to 1566 proteins in 299 species: Archae - 0; Bacteria - 279; Metazoa - 58; Fungi - 303; Plants - 685; Viruses - 3; Other Eukaryotes - 247 (source: NCBI BLink). & (gnl|cdd|39769 : 230.0) no description available & (gnl|cdd|73213 : 155.0) no description available & (reliability: 1072.0) & (original description: Putative Os05g0574000, Description = Phospholipase A1-II 6, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben044scf00018301ctg011_479-3614' '(at2g15230 : 172.0) Lipase active on medium and short chain triacylglycerols, but not on phospho- or galactolipids. Active between pH4 and 7 with an optimum at pH6. Knock-out mutant has not obvious phenotype. Predicted to be extracellular.; lipase 1 (LIP1); CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Myzus persicae-induced lipase 1 (TAIR:AT5G14180.1); Has 1912 Blast hits to 1877 proteins in 247 species: Archae - 0; Bacteria - 112; Metazoa - 1231; Fungi - 287; Plants - 167; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative LIP1, Description = Lipase, PFAM = )' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben044scf00024373ctg021_1-2024' '(at5g42930 : 156.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G56630.1); Has 1515 Blast hits to 1509 proteins in 328 species: Archae - 0; Bacteria - 466; Metazoa - 48; Fungi - 299; Plants - 385; Viruses - 5; Other Eukaryotes - 312 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative TAL3, Description = Feruloyl esterase A, PFAM = )' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben044scf00035670ctg005_1-8289' '(at5g14180 : 429.0) Myzus persicae-induced lipase 1 (MPL1); FUNCTIONS IN: catalytic activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: lipase 1 (TAIR:AT2G15230.1); Has 1911 Blast hits to 1879 proteins in 244 species: Archae - 0; Bacteria - 109; Metazoa - 1225; Fungi - 283; Plants - 181; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|37835 : 339.0) no description available & (reliability: 858.0) & (original description: Putative LIP2, Description = Triacylglycerol lipase 2, PFAM = PF04083)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf00167_379226-386837' '(at5g14180 : 516.0) Myzus persicae-induced lipase 1 (MPL1); FUNCTIONS IN: catalytic activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: lipase 1 (TAIR:AT2G15230.1); Has 1911 Blast hits to 1879 proteins in 244 species: Archae - 0; Bacteria - 109; Metazoa - 1225; Fungi - 283; Plants - 181; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|37835 : 330.0) no description available & (reliability: 1032.0) & (original description: Putative LIP2, Description = Triacylglycerol lipase 2, PFAM = PF04083;PF12146)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf00270_416452-433040' '(at1g05790 : 598.0) lipase class 3 family protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G42450.1); Has 496 Blast hits to 490 proteins in 108 species: Archae - 0; Bacteria - 1; Metazoa - 175; Fungi - 34; Plants - 192; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|37299 : 142.0) no description available & (gnl|cdd|73213 : 101.0) no description available & (reliability: 1196.0) & (original description: Putative BnaC08g01510D, Description = BnaC08g01510D protein, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf00324_271522-284457' '(at4g10955 : 410.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G05260.1). & (reliability: 820.0) & (original description: Putative Os01g0719900, Description = Os01g0719900 protein, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf00410_135992-142248' '(at4g10955 : 416.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G05260.1). & (reliability: 832.0) & (original description: Putative At4g10955, Description = GDSL esterase/lipase At4g10955, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf00428_1167775-1171457' '(at4g16820 : 550.0) Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.; alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: sperm cell, cultured cell; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G44810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39769 : 194.0) no description available & (gnl|cdd|73213 : 146.0) no description available & (reliability: 1100.0) & (original description: Putative GLA1, Description = Glycerolipase A1, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf01032_377941-381196' '(at1g56630 : 130.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G42930.1); Has 1532 Blast hits to 1526 proteins in 353 species: Archae - 0; Bacteria - 521; Metazoa - 41; Fungi - 272; Plants - 392; Viruses - 3; Other Eukaryotes - 303 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative PGSC0003DMG400007965, Description = Alpha/beta-Hydrolases superfamily protein, putative, PFAM = )' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf01076_640337-645630' '(at3g61680 : 553.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G02660.1); Has 210 Blast hits to 205 proteins in 59 species: Archae - 0; Bacteria - 15; Metazoa - 3; Fungi - 31; Plants - 122; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|73213 : 109.0) no description available & (reliability: 1106.0) & (original description: Putative BnaC04g21650D, Description = BnaC04g21650D protein, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf01228_226741-230546' '(at4g18550 : 473.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06250.1); Has 1222 Blast hits to 1214 proteins in 260 species: Archae - 0; Bacteria - 234; Metazoa - 8; Fungi - 231; Plants - 573; Viruses - 1; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|39769 : 200.0) no description available & (gnl|cdd|85661 : 139.0) no description available & (reliability: 946.0) & (original description: Putative DSEL, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf01283_182734-188334' '(at3g14360 : 565.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G42930.1); Has 1400 Blast hits to 1392 proteins in 294 species: Archae - 0; Bacteria - 352; Metazoa - 56; Fungi - 304; Plants - 428; Viruses - 0; Other Eukaryotes - 260 (source: NCBI BLink). & (gnl|cdd|39769 : 111.0) no description available & (gnl|cdd|73213 : 102.0) no description available & (reliability: 1130.0) & (original description: Putative TAL4, Description = Triacylglycerol acidic lipase TAL4, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf01350_36823-55509' '(at2g15230 : 433.0) Lipase active on medium and short chain triacylglycerols, but not on phospho- or galactolipids. Active between pH4 and 7 with an optimum at pH6. Knock-out mutant has not obvious phenotype. Predicted to be extracellular.; lipase 1 (LIP1); CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Myzus persicae-induced lipase 1 (TAIR:AT5G14180.1); Has 1912 Blast hits to 1877 proteins in 247 species: Archae - 0; Bacteria - 112; Metazoa - 1231; Fungi - 287; Plants - 167; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37835 : 242.0) no description available & (reliability: 866.0) & (original description: Putative LIP1, Description = Triacylglycerol lipase 1, PFAM = PF04083)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf01553_299467-303843' '(at5g42930 : 301.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G56630.1); Has 1515 Blast hits to 1509 proteins in 328 species: Archae - 0; Bacteria - 466; Metazoa - 48; Fungi - 299; Plants - 385; Viruses - 5; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|39769 : 135.0) no description available & (gnl|cdd|73213 : 135.0) no description available & (reliability: 602.0) & (original description: Putative LIP1, Description = Lipase, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf01922_1076978-1091271' '(at4g13550 : 521.0) triglyceride lipases;triglyceride lipases; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18640.1); Has 2190 Blast hits to 2187 proteins in 383 species: Archae - 0; Bacteria - 476; Metazoa - 135; Fungi - 440; Plants - 705; Viruses - 12; Other Eukaryotes - 422 (source: NCBI BLink). & (gnl|cdd|73213 : 124.0) no description available & (gnl|cdd|39769 : 90.9) no description available & (reliability: 1042.0) & (original description: Putative At4g13550, Description = Putative triglyceride lipase, PFAM = PF00168;PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf02299_216224-219738' '(at1g30370 : 505.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06800.1); Has 1971 Blast hits to 1966 proteins in 378 species: Archae - 0; Bacteria - 534; Metazoa - 65; Fungi - 334; Plants - 717; Viruses - 10; Other Eukaryotes - 311 (source: NCBI BLink). & (gnl|cdd|39769 : 207.0) no description available & (gnl|cdd|73213 : 140.0) no description available & (reliability: 1010.0) & (original description: Putative DAD1, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf02469_166966-172054' '(at2g30550 : 627.0) Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.; alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06800.1); Has 1575 Blast hits to 1566 proteins in 299 species: Archae - 0; Bacteria - 279; Metazoa - 58; Fungi - 303; Plants - 685; Viruses - 3; Other Eukaryotes - 247 (source: NCBI BLink). & (gnl|cdd|39769 : 253.0) no description available & (gnl|cdd|73213 : 154.0) no description available & (reliability: 1254.0) & (original description: Putative At2g30550, Description = Phospholipase A1-Igamma2, chloroplastic, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf03036_638118-641494' '(at1g05800 : 508.0) Encodes a galactolipase. Located in the chloroplast. Involved in the initial step of jasmonic acid biosynthesis. Expressed in vegetative tissues and is necessary for the biosynthesis of basal-level JAs in vegetative tissues.; DONGLE (DGL); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G31690.1); Has 1183 Blast hits to 1177 proteins in 252 species: Archae - 0; Bacteria - 234; Metazoa - 21; Fungi - 238; Plants - 544; Viruses - 3; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|39769 : 192.0) no description available & (gnl|cdd|73213 : 137.0) no description available & (reliability: 1016.0) & (original description: Putative DGL, Description = Galactolipase DONGLE, chloroplastic, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf03309_425907-429929' '(at4g18550 : 442.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06250.1); Has 1222 Blast hits to 1214 proteins in 260 species: Archae - 0; Bacteria - 234; Metazoa - 8; Fungi - 231; Plants - 573; Viruses - 1; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|39769 : 190.0) no description available & (gnl|cdd|85661 : 127.0) no description available & (reliability: 884.0) & (original description: Putative DSEL, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf03309_450307-453741' '(at4g18550 : 422.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06250.1); Has 1222 Blast hits to 1214 proteins in 260 species: Archae - 0; Bacteria - 234; Metazoa - 8; Fungi - 231; Plants - 573; Viruses - 1; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|39769 : 191.0) no description available & (gnl|cdd|73213 : 130.0) no description available & (reliability: 844.0) & (original description: Putative Os01g0651200, Description = Phospholipase A1-II 2, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf03600_52107-61766' '(at5g14180 : 525.0) Myzus persicae-induced lipase 1 (MPL1); FUNCTIONS IN: catalytic activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: lipase 1 (TAIR:AT2G15230.1); Has 1911 Blast hits to 1879 proteins in 244 species: Archae - 0; Bacteria - 109; Metazoa - 1225; Fungi - 283; Plants - 181; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|37835 : 328.0) no description available & (reliability: 1050.0) & (original description: Putative LIP2, Description = Triacylglycerol lipase 2, PFAM = PF04083)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf03766_233103-241104' '(at5g14180 : 491.0) Myzus persicae-induced lipase 1 (MPL1); FUNCTIONS IN: catalytic activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: lipase 1 (TAIR:AT2G15230.1); Has 1911 Blast hits to 1879 proteins in 244 species: Archae - 0; Bacteria - 109; Metazoa - 1225; Fungi - 283; Plants - 181; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|37835 : 310.0) no description available & (reliability: 982.0) & (original description: Putative LIP2, Description = Triacylglycerol lipase 2, PFAM = PF04083;PF00561)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf03952_15935-21453' '(at3g61680 : 554.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G02660.1); Has 210 Blast hits to 205 proteins in 59 species: Archae - 0; Bacteria - 15; Metazoa - 3; Fungi - 31; Plants - 122; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|85661 : 106.0) no description available & (reliability: 1108.0) & (original description: Putative BnaC04g21650D, Description = BnaC04g21650D protein, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf04007_746084-759725' '(at5g42930 : 502.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G56630.1); Has 1515 Blast hits to 1509 proteins in 328 species: Archae - 0; Bacteria - 466; Metazoa - 48; Fungi - 299; Plants - 385; Viruses - 5; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|73213 : 143.0) no description available & (gnl|cdd|39769 : 134.0) no description available & (reliability: 1004.0) & (original description: Putative TAL5, Description = Triacylglycerol acidic lipase TAL5, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf04731_1660-25855' '(at5g14180 : 245.0) Myzus persicae-induced lipase 1 (MPL1); FUNCTIONS IN: catalytic activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: lipase 1 (TAIR:AT2G15230.1); Has 1911 Blast hits to 1879 proteins in 244 species: Archae - 0; Bacteria - 109; Metazoa - 1225; Fungi - 283; Plants - 181; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|37835 : 180.0) no description available & (reliability: 490.0) & (original description: Putative LIP2, Description = Lipase, PFAM = PF00561)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf05247_215042-218481' '(at1g05800 : 478.0) Encodes a galactolipase. Located in the chloroplast. Involved in the initial step of jasmonic acid biosynthesis. Expressed in vegetative tissues and is necessary for the biosynthesis of basal-level JAs in vegetative tissues.; DONGLE (DGL); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G31690.1); Has 1183 Blast hits to 1177 proteins in 252 species: Archae - 0; Bacteria - 234; Metazoa - 21; Fungi - 238; Plants - 544; Viruses - 3; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|39769 : 185.0) no description available & (gnl|cdd|73213 : 131.0) no description available & (reliability: 956.0) & (original description: Putative DGL, Description = Galactolipase DONGLE, chloroplastic, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf06027_214359-218323' '(at4g18550 : 247.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06250.1); Has 1222 Blast hits to 1214 proteins in 260 species: Archae - 0; Bacteria - 234; Metazoa - 8; Fungi - 231; Plants - 573; Viruses - 1; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|39769 : 129.0) no description available & (gnl|cdd|85661 : 128.0) no description available & (reliability: 494.0) & (original description: Putative PLA3, Description = Phospholipase A3, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf06261_335599-340783' '(at5g42930 : 464.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G56630.1); Has 1515 Blast hits to 1509 proteins in 328 species: Archae - 0; Bacteria - 466; Metazoa - 48; Fungi - 299; Plants - 385; Viruses - 5; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|73213 : 144.0) no description available & (gnl|cdd|39769 : 137.0) no description available & (reliability: 928.0) & (original description: Putative TLL1, Description = At1g45200, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf07748_26768-30316' '(at2g30550 : 524.0) Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.; alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06800.1); Has 1575 Blast hits to 1566 proteins in 299 species: Archae - 0; Bacteria - 279; Metazoa - 58; Fungi - 303; Plants - 685; Viruses - 3; Other Eukaryotes - 247 (source: NCBI BLink). & (gnl|cdd|39769 : 221.0) no description available & (gnl|cdd|73213 : 149.0) no description available & (reliability: 1048.0) & (original description: Putative At1g06800, Description = Phospholipase A1-Igamma1, chloroplastic, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf07825_235864-239384' '(at1g51440 : 635.0) Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.; alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G30550.2); Has 1155 Blast hits to 1147 proteins in 234 species: Archae - 0; Bacteria - 238; Metazoa - 19; Fungi - 161; Plants - 563; Viruses - 5; Other Eukaryotes - 169 (source: NCBI BLink). & (gnl|cdd|39769 : 239.0) no description available & (gnl|cdd|73213 : 143.0) no description available & (reliability: 1270.0) & (original description: Putative Sb03g046400, Description = Putative uncharacterized protein Sb03g046400, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf08921_225334-229193' '(at4g18550 : 447.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06250.1); Has 1222 Blast hits to 1214 proteins in 260 species: Archae - 0; Bacteria - 234; Metazoa - 8; Fungi - 231; Plants - 573; Viruses - 1; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|39769 : 194.0) no description available & (gnl|cdd|73213 : 129.0) no description available & (reliability: 894.0) & (original description: Putative DSEL, Description = Phospholipase A1-IIgamma, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf09317_143242-146840' '(at4g16820 : 524.0) Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.; alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: sperm cell, cultured cell; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G44810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39769 : 192.0) no description available & (gnl|cdd|73213 : 146.0) no description available & (reliability: 1048.0) & (original description: Putative At4g16820, Description = Phospholipase A1-Ibeta2, chloroplastic, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf10353_55159-58669' '(at4g18550 : 441.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06250.1); Has 1222 Blast hits to 1214 proteins in 260 species: Archae - 0; Bacteria - 234; Metazoa - 8; Fungi - 231; Plants - 573; Viruses - 1; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|39769 : 196.0) no description available & (gnl|cdd|85661 : 129.0) no description available & (reliability: 882.0) & (original description: Putative Os01g0651800, Description = Phospholipase A1-II 3, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf10436_132849-138012' '(at3g14360 : 608.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G42930.1); Has 1400 Blast hits to 1392 proteins in 294 species: Archae - 0; Bacteria - 352; Metazoa - 56; Fungi - 304; Plants - 428; Viruses - 0; Other Eukaryotes - 260 (source: NCBI BLink). & (gnl|cdd|73213 : 143.0) no description available & (gnl|cdd|39769 : 136.0) no description available & (reliability: 1216.0) & (original description: Putative TAL4, Description = Triacylglycerol acidic lipase TAL4, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf11177_11231-14582' '(at5g24230 : 385.0) Lipase class 3-related protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: Lipase class 3-related protein (TAIR:AT5G24220.1); Has 233 Blast hits to 232 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 10; Plants - 216; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 720.0) & (original description: Putative At4g10955, Description = GDSL esterase/lipase At4g10955, PFAM = PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf11312_12373-19396' '(at3g14075 : 695.0) Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3; FUNCTIONS IN: triglyceride lipase activity, carboxylesterase activity; INVOLVED IN: lipid catabolic process, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), Mono-/di-acylglycerol lipase, N-terminal (InterPro:IPR005592); BEST Arabidopsis thaliana protein match is: Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3 (TAIR:AT4G16070.1). & (gnl|cdd|37299 : 212.0) no description available & (gnl|cdd|73213 : 119.0) no description available & (reliability: 1390.0) & (original description: Putative BnaC01g37230D, Description = BnaC01g37230D protein, PFAM = PF01764;PF03893)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf11646_166583-191538' '(at4g13550 : 694.0) triglyceride lipases;triglyceride lipases; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18640.1); Has 2190 Blast hits to 2187 proteins in 383 species: Archae - 0; Bacteria - 476; Metazoa - 135; Fungi - 440; Plants - 705; Viruses - 12; Other Eukaryotes - 422 (source: NCBI BLink). & (gnl|cdd|73213 : 155.0) no description available & (gnl|cdd|39769 : 128.0) no description available & (reliability: 1388.0) & (original description: Putative At4g13550, Description = Putative triglyceride lipase, PFAM = PF00168;PF01764)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf13005_239587-265391' '(at4g16070 : 686.0) Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3; FUNCTIONS IN: triglyceride lipase activity, carboxylesterase activity; INVOLVED IN: lipid catabolic process, lipid metabolic process; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), Mono-/di-acylglycerol lipase, N-terminal (InterPro:IPR005592); BEST Arabidopsis thaliana protein match is: Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3 (TAIR:AT3G14075.2). & (gnl|cdd|37299 : 251.0) no description available & (gnl|cdd|73213 : 116.0) no description available & (reliability: 1372.0) & (original description: Putative dl4075c, Description = Putative uncharacterized protein AT4g16070, PFAM = PF01764;PF03893)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf16660_237358-246057' '(at1g73920 : 863.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G18460.1); Has 1707 Blast hits to 1690 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 1166; Fungi - 276; Plants - 162; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|37835 : 288.0) no description available & (reliability: 1696.0) & (original description: Putative BnaA08g29390D, Description = BnaA08g29390D protein, PFAM = PF04083)' T '11.9.2.1' 'lipid metabolism.lipid degradation.lipases.triacylglycerol lipase' 'niben101scf21890_107525-111763' '(at2g30550 : 486.0) Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.; alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06800.1); Has 1575 Blast hits to 1566 proteins in 299 species: Archae - 0; Bacteria - 279; Metazoa - 58; Fungi - 303; Plants - 685; Viruses - 3; Other Eukaryotes - 247 (source: NCBI BLink). & (gnl|cdd|39769 : 206.0) no description available & (gnl|cdd|73213 : 134.0) no description available & (reliability: 972.0) & (original description: Putative DAL6, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF01764)' T '11.9.2.2' 'lipid metabolism.lipid degradation.lipases.acylglycerol lipase' 'nbv0.3scaffold18163_52597-60083' '(at5g16120 : 497.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G77420.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36668 : 389.0) no description available & (gnl|cdd|32448 : 143.0) no description available & (reliability: 994.0) & (original description: Putative At5g16120, Description = Hydrolase, alpha/beta fold family protein, PFAM = PF12146)' T '11.9.2.2' 'lipid metabolism.lipid degradation.lipases.acylglycerol lipase' 'nbv0.3scaffold31408_631-6430' '(at2g39420 : 439.0) alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G39410.2); Has 4720 Blast hits to 4720 proteins in 1453 species: Archae - 32; Bacteria - 3497; Metazoa - 120; Fungi - 143; Plants - 476; Viruses - 35; Other Eukaryotes - 417 (source: NCBI BLink). & (gnl|cdd|36668 : 427.0) no description available & (gnl|cdd|32448 : 143.0) no description available & (reliability: 836.0) & (original description: Putative At2g39420, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12146)' T '11.9.2.2' 'lipid metabolism.lipid degradation.lipases.acylglycerol lipase' 'niben101scf00449_74326-84641' '(at2g39420 : 397.0) alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G39410.2); Has 4720 Blast hits to 4720 proteins in 1453 species: Archae - 32; Bacteria - 3497; Metazoa - 120; Fungi - 143; Plants - 476; Viruses - 35; Other Eukaryotes - 417 (source: NCBI BLink). & (gnl|cdd|36668 : 391.0) no description available & (gnl|cdd|32448 : 127.0) no description available & (reliability: 752.0) & (original description: Putative At2g39420, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12146)' T '11.9.2.2' 'lipid metabolism.lipid degradation.lipases.acylglycerol lipase' 'niben101scf00894_250157-257643' '(at5g16120 : 479.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G77420.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36668 : 378.0) no description available & (gnl|cdd|32448 : 142.0) no description available & (reliability: 958.0) & (original description: Putative At5g16120, Description = Hydrolase, alpha/beta fold family protein, PFAM = PF12146)' T '11.9.2.2' 'lipid metabolism.lipid degradation.lipases.acylglycerol lipase' 'niben101scf01991_321255-328448' '(at5g16120 : 476.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G77420.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36668 : 375.0) no description available & (gnl|cdd|32448 : 144.0) no description available & (reliability: 952.0) & (original description: Putative AY109678, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12146)' T '11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'nbv0.3scaffold9856_16037-47163' '(at1g31480 : 1056.0) encodes a novel protein that may be part of a gene family represented by bovine phosphatidic acid-preferring phospholipase A1 (PA-PLA1)containing a putative transmembrane domain. SGR2 is involved in the formation and function of the vacuole.; SHOOT GRAVITROPISM 2 (SGR2); FUNCTIONS IN: phospholipase A1 activity; INVOLVED IN: gravitropism, negative gravitropism, detection of gravity, amyloplast organization; LOCATED IN: plant-type vacuole membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDHD (InterPro:IPR004177); Has 1169 Blast hits to 760 proteins in 179 species: Archae - 0; Bacteria - 1; Metazoa - 647; Fungi - 353; Plants - 53; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37519 : 380.0) no description available & (gnl|cdd|66529 : 130.0) no description available & (reliability: 2112.0) & (original description: Putative SGR2, Description = Phospholipase DDHD2, PFAM = PF02862)' T '11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'nbv0.3scaffold17047_4441-31264' '(at2g26870 : 752.0) non-specific phospholipase C2 (NPC2); FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: triglyceride biosynthetic process, phospholipid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C1 (TAIR:AT1G07230.1); Has 2169 Blast hits to 2123 proteins in 400 species: Archae - 32; Bacteria - 1806; Metazoa - 0; Fungi - 127; Plants - 155; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|67785 : 297.0) no description available & (reliability: 1504.0) & (original description: Putative NPC2, Description = Non-specific phospholipase C2, PFAM = PF04185)' T '11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'nbv0.3scaffold37005_284-20277' '(at3g18860 : 1061.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), PLAA family ubiquitin binding, PFU (InterPro:IPR015155), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), PUL (InterPro:IPR013535); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 46729 Blast hits to 23224 proteins in 745 species: Archae - 52; Bacteria - 6206; Metazoa - 17661; Fungi - 11352; Plants - 5937; Viruses - 0; Other Eukaryotes - 5521 (source: NCBI BLink). & (gnl|cdd|35522 : 719.0) no description available & (gnl|cdd|87495 : 197.0) no description available & (reliability: 2122.0) & (original description: Putative At3g18860, Description = AT3g18860/MCB22_3, PFAM = PF09070;PF08324;PF00400;PF00400;PF00400;PF00400;PF00400)' T '11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'nbv0.3scaffold65002_1-10552' '(at3g14205 : 845.0) Phosphoinositide phosphatase family protein; FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2094 Blast hits to 1659 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 659; Plants - 270; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (gnl|cdd|37099 : 751.0) no description available & (gnl|cdd|66103 : 282.0) no description available & (reliability: 1582.0) & (original description: Putative SAC4, Description = Phosphoinositide phosphatase SAC4, PFAM = PF02383)' T '11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'nbv0.3scaffold83877_1-5463' '(at3g14205 : 322.0) Phosphoinositide phosphatase family protein; FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2094 Blast hits to 1659 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 659; Plants - 270; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (gnl|cdd|37099 : 265.0) no description available & (gnl|cdd|66103 : 121.0) no description available & (reliability: 606.0) & (original description: Putative FIG4, Description = Polyphosphoinositide phosphatase, PFAM = PF02383)' T '11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben044scf00020625ctg000_2618-11184' '(at1g31480 : 402.0) encodes a novel protein that may be part of a gene family represented by bovine phosphatidic acid-preferring phospholipase A1 (PA-PLA1)containing a putative transmembrane domain. SGR2 is involved in the formation and function of the vacuole.; SHOOT GRAVITROPISM 2 (SGR2); FUNCTIONS IN: phospholipase A1 activity; INVOLVED IN: gravitropism, negative gravitropism, detection of gravity, amyloplast organization; LOCATED IN: plant-type vacuole membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDHD (InterPro:IPR004177); Has 1169 Blast hits to 760 proteins in 179 species: Archae - 0; Bacteria - 1; Metazoa - 647; Fungi - 353; Plants - 53; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37519 : 198.0) no description available & (reliability: 804.0) & (original description: Putative SGR2, Description = SHOOT GRAVITROPISM 2 family protein, PFAM = )' T '11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben044scf00022042ctg012_890-7780' '(at3g43220 : 537.0) Phosphoinositide phosphatase family protein; FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2101 Blast hits to 1628 proteins in 221 species: Archae - 0; Bacteria - 0; Metazoa - 799; Fungi - 628; Plants - 328; Viruses - 0; Other Eukaryotes - 346 (source: NCBI BLink). & (gnl|cdd|37099 : 454.0) no description available & (gnl|cdd|66103 : 133.0) no description available & (reliability: 1074.0) & (original description: Putative FIG4, Description = Polyphosphoinositide phosphatase, PFAM = PF02383)' T '11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben044scf00033554ctg001_6526-12310' '(at3g14205 : 331.0) Phosphoinositide phosphatase family protein; FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2094 Blast hits to 1659 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 659; Plants - 270; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (gnl|cdd|37099 : 270.0) no description available & (gnl|cdd|66103 : 122.0) no description available & (reliability: 620.0) & (original description: Putative FIG4, Description = Polyphosphoinositide phosphatase, PFAM = PF02383)' T '11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf01847_838777-841831' '(at4g38690 : 524.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phospholipase C activity, phosphoric diester hydrolase activity; INVOLVED IN: intracellular signaling pathway, N-terminal protein myristoylation, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT4G34920.1); Has 888 Blast hits to 888 proteins in 280 species: Archae - 0; Bacteria - 676; Metazoa - 61; Fungi - 70; Plants - 52; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|39507 : 300.0) no description available & (reliability: 1048.0) & (original description: Putative PLC2, Description = Phosphoinositide-specific phospholipase C, PFAM = PF00388)' T '11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf02658_181391-184665' '(at4g38690 : 536.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phospholipase C activity, phosphoric diester hydrolase activity; INVOLVED IN: intracellular signaling pathway, N-terminal protein myristoylation, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT4G34920.1); Has 888 Blast hits to 888 proteins in 280 species: Archae - 0; Bacteria - 676; Metazoa - 61; Fungi - 70; Plants - 52; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|39507 : 314.0) no description available & (reliability: 1072.0) & (original description: Putative PLC2, Description = Phosphoinositide-specific phospholipase C, PFAM = PF00388)' T '11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf03776_10464-55801' '(at5g20840 : 914.0) Phosphoinositide phosphatase family protein; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT3G43220.1); Has 1872 Blast hits to 1673 proteins in 232 species: Archae - 0; Bacteria - 12; Metazoa - 657; Fungi - 613; Plants - 279; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink). & (gnl|cdd|37099 : 767.0) no description available & (gnl|cdd|66103 : 280.0) no description available & (reliability: 1826.0) & (original description: Putative SAC4, Description = Phosphoinositide phosphatase SAC4, PFAM = PF02383)' T '11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf03776_34609-40178' '(at3g43220 : 346.0) Phosphoinositide phosphatase family protein; FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2101 Blast hits to 1628 proteins in 221 species: Archae - 0; Bacteria - 0; Metazoa - 799; Fungi - 628; Plants - 328; Viruses - 0; Other Eukaryotes - 346 (source: NCBI BLink). & (gnl|cdd|37099 : 303.0) no description available & (gnl|cdd|66103 : 133.0) no description available & (reliability: 692.0) & (original description: Putative FIG4, Description = Polyphosphoinositide phosphatase, PFAM = PF02383)' T '11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf04077_382349-417937' '(at1g31480 : 187.0) encodes a novel protein that may be part of a gene family represented by bovine phosphatidic acid-preferring phospholipase A1 (PA-PLA1)containing a putative transmembrane domain. SGR2 is involved in the formation and function of the vacuole.; SHOOT GRAVITROPISM 2 (SGR2); FUNCTIONS IN: phospholipase A1 activity; INVOLVED IN: gravitropism, negative gravitropism, detection of gravity, amyloplast organization; LOCATED IN: plant-type vacuole membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDHD (InterPro:IPR004177); Has 1169 Blast hits to 760 proteins in 179 species: Archae - 0; Bacteria - 1; Metazoa - 647; Fungi - 353; Plants - 53; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37519 : 118.0) no description available & (reliability: 374.0) & (original description: Putative SGR2, Description = Phospholipase DDHD2, PFAM = PF02862)' T '11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf04077_414274-419947' '(at1g31480 : 225.0) encodes a novel protein that may be part of a gene family represented by bovine phosphatidic acid-preferring phospholipase A1 (PA-PLA1)containing a putative transmembrane domain. SGR2 is involved in the formation and function of the vacuole.; SHOOT GRAVITROPISM 2 (SGR2); FUNCTIONS IN: phospholipase A1 activity; INVOLVED IN: gravitropism, negative gravitropism, detection of gravity, amyloplast organization; LOCATED IN: plant-type vacuole membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDHD (InterPro:IPR004177); Has 1169 Blast hits to 760 proteins in 179 species: Archae - 0; Bacteria - 1; Metazoa - 647; Fungi - 353; Plants - 53; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37519 : 135.0) no description available & (gnl|cdd|66529 : 91.6) no description available & (reliability: 450.0) & (original description: Putative ddhd1, Description = Phospholipase DDHD2, PFAM = PF02862)' T '11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf04077_450062-454161' '(at1g31480 : 215.0) encodes a novel protein that may be part of a gene family represented by bovine phosphatidic acid-preferring phospholipase A1 (PA-PLA1)containing a putative transmembrane domain. SGR2 is involved in the formation and function of the vacuole.; SHOOT GRAVITROPISM 2 (SGR2); FUNCTIONS IN: phospholipase A1 activity; INVOLVED IN: gravitropism, negative gravitropism, detection of gravity, amyloplast organization; LOCATED IN: plant-type vacuole membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDHD (InterPro:IPR004177); Has 1169 Blast hits to 760 proteins in 179 species: Archae - 0; Bacteria - 1; Metazoa - 647; Fungi - 353; Plants - 53; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37519 : 102.0) no description available & (reliability: 430.0) & (original description: Putative SGR2, Description = SHOOT GRAVITROPISM 2 family protein, PFAM = )' T '11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf06829_268320-300534' '(at1g31480 : 1074.0) encodes a novel protein that may be part of a gene family represented by bovine phosphatidic acid-preferring phospholipase A1 (PA-PLA1)containing a putative transmembrane domain. SGR2 is involved in the formation and function of the vacuole.; SHOOT GRAVITROPISM 2 (SGR2); FUNCTIONS IN: phospholipase A1 activity; INVOLVED IN: gravitropism, negative gravitropism, detection of gravity, amyloplast organization; LOCATED IN: plant-type vacuole membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDHD (InterPro:IPR004177); Has 1169 Blast hits to 760 proteins in 179 species: Archae - 0; Bacteria - 1; Metazoa - 647; Fungi - 353; Plants - 53; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37519 : 382.0) no description available & (gnl|cdd|66529 : 130.0) no description available & (reliability: 2148.0) & (original description: Putative SGR2, Description = Phospholipase SGR2, PFAM = PF02862)' T '11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf06829_292041-294913' '(at1g31480 : 100.0) encodes a novel protein that may be part of a gene family represented by bovine phosphatidic acid-preferring phospholipase A1 (PA-PLA1)containing a putative transmembrane domain. SGR2 is involved in the formation and function of the vacuole.; SHOOT GRAVITROPISM 2 (SGR2); FUNCTIONS IN: phospholipase A1 activity; INVOLVED IN: gravitropism, negative gravitropism, detection of gravity, amyloplast organization; LOCATED IN: plant-type vacuole membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDHD (InterPro:IPR004177); Has 1169 Blast hits to 760 proteins in 179 species: Archae - 0; Bacteria - 1; Metazoa - 647; Fungi - 353; Plants - 53; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative SGR2, Description = SHOOT GRAVITROPISM 2 family protein, PFAM = )' T '11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf07763_303518-314870' '(at3g14205 : 869.0) Phosphoinositide phosphatase family protein; FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2094 Blast hits to 1659 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 659; Plants - 270; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (gnl|cdd|37099 : 777.0) no description available & (gnl|cdd|66103 : 284.0) no description available & (reliability: 1640.0) & (original description: Putative SAC2, Description = Phosphoinositide phosphatase SAC2, PFAM = PF02383)' T '11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf08407_135319-146379' '(at3g14205 : 900.0) Phosphoinositide phosphatase family protein; FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2094 Blast hits to 1659 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 659; Plants - 270; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (gnl|cdd|37099 : 808.0) no description available & (gnl|cdd|66103 : 301.0) no description available & (reliability: 1694.0) & (original description: Putative SAC2, Description = Phosphoinositide phosphatase SAC2, PFAM = PF02383)' T '11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf09004_260267-270779' '(at2g26870 : 755.0) non-specific phospholipase C2 (NPC2); FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: triglyceride biosynthetic process, phospholipid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C1 (TAIR:AT1G07230.1); Has 2169 Blast hits to 2123 proteins in 400 species: Archae - 32; Bacteria - 1806; Metazoa - 0; Fungi - 127; Plants - 155; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|67785 : 301.0) no description available & (reliability: 1510.0) & (original description: Putative NPC1, Description = Non-specific phospholipase C1, PFAM = PF04185)' T '11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf10575_69154-94779' '(at3g18860 : 1117.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), PLAA family ubiquitin binding, PFU (InterPro:IPR015155), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), PUL (InterPro:IPR013535); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 46729 Blast hits to 23224 proteins in 745 species: Archae - 52; Bacteria - 6206; Metazoa - 17661; Fungi - 11352; Plants - 5937; Viruses - 0; Other Eukaryotes - 5521 (source: NCBI BLink). & (gnl|cdd|35522 : 719.0) no description available & (gnl|cdd|87495 : 200.0) no description available & (reliability: 2234.0) & (original description: Putative At3g18860, Description = AT3g18860/MCB22_3, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF08324;PF09070)' T '11.9.3' 'lipid metabolism.lipid degradation.lysophospholipases' 'niben101scf11182_228611-235149' '(at1g77420 : 458.0) alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G16120.1); Has 4552 Blast hits to 4550 proteins in 1360 species: Archae - 49; Bacteria - 3106; Metazoa - 121; Fungi - 218; Plants - 474; Viruses - 41; Other Eukaryotes - 543 (source: NCBI BLink). & (gnl|cdd|36668 : 379.0) no description available & (gnl|cdd|32448 : 138.0) no description available & (reliability: 916.0) & (original description: Putative At5g16120, Description = Hydrolase, alpha/beta fold family protein, PFAM = PF12146)' T '11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'nbv0.5scaffold265_557791-564146' '(p93400|plda1_tobac : 1650.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Nicotiana tabacum (Common tobacco) & (at1g52570 : 1410.0) member of C2-PLD subfamily; phospholipase D alpha 2 (PLDALPHA2); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: phosphatidylcholine metabolic process, metabolic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D alpha 1 (TAIR:AT3G15730.1); Has 2026 Blast hits to 1555 proteins in 414 species: Archae - 2; Bacteria - 579; Metazoa - 311; Fungi - 419; Plants - 577; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|36543 : 874.0) no description available & (gnl|cdd|29343 : 114.0) no description available & (reliability: 2820.0) & (original description: Putative PLD1, Description = Phospholipase D alpha 1, PFAM = PF00614;PF00614;PF00168;PF12357)' T '11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'nbv0.5scaffold3610_156473-165178' '(at2g42010 : 951.0) phospholipase D (PLDbeta); phospholipase D beta 1 (PLDBETA1); FUNCTIONS IN: phospholipase D activity, protein binding, phosphatidylinositol-4,5-bisphosphate binding; INVOLVED IN: response to cadmium ion, defense response to bacterium, incompatible interaction; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D beta 2 (TAIR:AT4G00240.1); Has 42228 Blast hits to 24253 proteins in 1246 species: Archae - 34; Bacteria - 3967; Metazoa - 15807; Fungi - 8808; Plants - 7882; Viruses - 972; Other Eukaryotes - 4758 (source: NCBI BLink). & (gnl|cdd|36543 : 567.0) no description available & (q41142|plda1_ricco : 450.0) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Ricinus communis (Castor bean) & (gnl|cdd|29343 : 98.4) no description available & (reliability: 1902.0) & (original description: Putative pld, Description = Phospholipase D, PFAM = PF00168;PF00614)' T '11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben044scf00004138ctg002_2076-11230' '(at2g42010 : 950.0) phospholipase D (PLDbeta); phospholipase D beta 1 (PLDBETA1); FUNCTIONS IN: phospholipase D activity, protein binding, phosphatidylinositol-4,5-bisphosphate binding; INVOLVED IN: response to cadmium ion, defense response to bacterium, incompatible interaction; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D beta 2 (TAIR:AT4G00240.1); Has 42228 Blast hits to 24253 proteins in 1246 species: Archae - 34; Bacteria - 3967; Metazoa - 15807; Fungi - 8808; Plants - 7882; Viruses - 972; Other Eukaryotes - 4758 (source: NCBI BLink). & (gnl|cdd|36543 : 566.0) no description available & (q41142|plda1_ricco : 449.0) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Ricinus communis (Castor bean) & (gnl|cdd|29343 : 98.4) no description available & (reliability: 1900.0) & (original description: Putative pld, Description = Phospholipase D, PFAM = PF00168;PF00614)' T '11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben044scf00009080ctg004_12995-19303' '(at1g55180 : 958.0) member of C2-PLD. subfamily Represents a phospholipase D (PLD) gene with four exons, hence it is a member of the alpha class. Its amino acid sequence is quite different from other PLDs, therefore it might possess unique structural and/or catalytic properties.; phospholipase D alpha 4 (PLDEPSILON); CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D alpha 1 (TAIR:AT3G15730.1); Has 1995 Blast hits to 1528 proteins in 409 species: Archae - 2; Bacteria - 580; Metazoa - 308; Fungi - 419; Plants - 534; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (gnl|cdd|36543 : 631.0) no description available & (q43270|plda1_maize : 603.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Zea mays (Maize) & (reliability: 1916.0) & (original description: Putative plda2, Description = Phospholipase D, PFAM = PF00168;PF00614;PF12357;PF13091)' T '11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben044scf00015644ctg017_1364-7466' '(p93400|plda1_tobac : 1646.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Nicotiana tabacum (Common tobacco) & (at1g52570 : 1399.0) member of C2-PLD subfamily; phospholipase D alpha 2 (PLDALPHA2); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: phosphatidylcholine metabolic process, metabolic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D alpha 1 (TAIR:AT3G15730.1); Has 2026 Blast hits to 1555 proteins in 414 species: Archae - 2; Bacteria - 579; Metazoa - 311; Fungi - 419; Plants - 577; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|36543 : 869.0) no description available & (gnl|cdd|29343 : 111.0) no description available & (reliability: 2798.0) & (original description: Putative PLD1, Description = Phospholipase D alpha 1, PFAM = PF00614;PF00614;PF00168;PF12357)' T '11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben044scf00018081ctg007_9305-19736' '(at2g42010 : 874.0) phospholipase D (PLDbeta); phospholipase D beta 1 (PLDBETA1); FUNCTIONS IN: phospholipase D activity, protein binding, phosphatidylinositol-4,5-bisphosphate binding; INVOLVED IN: response to cadmium ion, defense response to bacterium, incompatible interaction; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D beta 2 (TAIR:AT4G00240.1); Has 42228 Blast hits to 24253 proteins in 1246 species: Archae - 34; Bacteria - 3967; Metazoa - 15807; Fungi - 8808; Plants - 7882; Viruses - 972; Other Eukaryotes - 4758 (source: NCBI BLink). & (gnl|cdd|36543 : 602.0) no description available & (q43270|plda1_maize : 504.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Zea mays (Maize) & (reliability: 1748.0) & (original description: Putative pldb, Description = Phospholipase D beta 1 isoform 1b-2, PFAM = PF12357;PF00614;PF00614)' T '11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben044scf00025135ctg006_30821-37040' '(p93400|plda1_tobac : 1665.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Nicotiana tabacum (Common tobacco) & (at1g52570 : 1418.0) member of C2-PLD subfamily; phospholipase D alpha 2 (PLDALPHA2); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: phosphatidylcholine metabolic process, metabolic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D alpha 1 (TAIR:AT3G15730.1); Has 2026 Blast hits to 1555 proteins in 414 species: Archae - 2; Bacteria - 579; Metazoa - 311; Fungi - 419; Plants - 577; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|36543 : 883.0) no description available & (gnl|cdd|29343 : 113.0) no description available & (reliability: 2836.0) & (original description: Putative PLD1, Description = Phospholipase D alpha 1, PFAM = PF00168;PF00614;PF00614;PF12357)' T '11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf00472_259199-266265' '(at4g35790 : 984.0) Encodes a protein with phospholipase D activity. Involved in phospolipase metabolism. Mutants are affected in hydrogen peroxide mediated cell death.; ARABIDOPSIS THALIANA PHOSPHOLIPASE D DELTA (ATPLDDELTA); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, phosphatidic acid metabolic process, programmed cell death; LOCATED IN: microtubule cytoskeleton, plasma membrane, vacuole, membrane; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D beta 1 (TAIR:AT2G42010.1); Has 2145 Blast hits to 1885 proteins in 404 species: Archae - 0; Bacteria - 362; Metazoa - 509; Fungi - 323; Plants - 775; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|36543 : 811.0) no description available & (q43270|plda1_maize : 728.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Zea mays (Maize) & (reliability: 1968.0) & (original description: Putative pld, Description = Phospholipase D, PFAM = PF00614;PF00614;PF00168;PF12357)' T '11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf00652_126768-169034' '(at3g16785 : 1364.0) Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Does not appear to be involved in root hair patterning. Not induced upon Pi starvation.; phospholipase D P1 (PLDP1); CONTAINS InterPro DOMAIN/s: Phospholipase D, eukaryota (InterPro:IPR016555), Pleckstrin homology-type (InterPro:IPR011993), Phospholipase D (InterPro:IPR015679), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: phospholipase D P2 (TAIR:AT3G05630.1); Has 3214 Blast hits to 1855 proteins in 548 species: Archae - 2; Bacteria - 1049; Metazoa - 509; Fungi - 676; Plants - 827; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36543 : 424.0) no description available & (gnl|cdd|29903 : 100.0) no description available & (p93400|plda1_tobac : 95.1) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Nicotiana tabacum (Common tobacco) & (reliability: 2728.0) & (original description: Putative pld1, Description = Phospholipase D1, PFAM = PF00614;PF13091)' T '11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf01719_391708-418745' '(at3g16785 : 1586.0) Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Does not appear to be involved in root hair patterning. Not induced upon Pi starvation.; phospholipase D P1 (PLDP1); CONTAINS InterPro DOMAIN/s: Phospholipase D, eukaryota (InterPro:IPR016555), Pleckstrin homology-type (InterPro:IPR011993), Phospholipase D (InterPro:IPR015679), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: phospholipase D P2 (TAIR:AT3G05630.1); Has 3214 Blast hits to 1855 proteins in 548 species: Archae - 2; Bacteria - 1049; Metazoa - 509; Fungi - 676; Plants - 827; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36543 : 422.0) no description available & (gnl|cdd|29903 : 118.0) no description available & (p93844|plda2_orysa : 102.0) Phospholipase D alpha 2 (EC 3.1.4.4) (PLD alpha 2) (Choline phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) - Oryza sativa (Rice) & (reliability: 3172.0) & (original description: Putative pld1, Description = Phospholipase D1, PFAM = PF00614;PF13091)' T '11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf01956_241621-275009' '(at3g16785 : 1402.0) Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Does not appear to be involved in root hair patterning. Not induced upon Pi starvation.; phospholipase D P1 (PLDP1); CONTAINS InterPro DOMAIN/s: Phospholipase D, eukaryota (InterPro:IPR016555), Pleckstrin homology-type (InterPro:IPR011993), Phospholipase D (InterPro:IPR015679), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: phospholipase D P2 (TAIR:AT3G05630.1); Has 3214 Blast hits to 1855 proteins in 548 species: Archae - 2; Bacteria - 1049; Metazoa - 509; Fungi - 676; Plants - 827; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36543 : 393.0) no description available & (gnl|cdd|29903 : 117.0) no description available & (p93844|plda2_orysa : 103.0) Phospholipase D alpha 2 (EC 3.1.4.4) (PLD alpha 2) (Choline phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) - Oryza sativa (Rice) & (reliability: 2804.0) & (original description: Putative pld1, Description = Phospholipase D1, PFAM = PF13091;PF00614)' T '11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf01993_945735-951695' '(at4g35790 : 1014.0) Encodes a protein with phospholipase D activity. Involved in phospolipase metabolism. Mutants are affected in hydrogen peroxide mediated cell death.; ARABIDOPSIS THALIANA PHOSPHOLIPASE D DELTA (ATPLDDELTA); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, phosphatidic acid metabolic process, programmed cell death; LOCATED IN: microtubule cytoskeleton, plasma membrane, vacuole, membrane; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D beta 1 (TAIR:AT2G42010.1); Has 2145 Blast hits to 1885 proteins in 404 species: Archae - 0; Bacteria - 362; Metazoa - 509; Fungi - 323; Plants - 775; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|36543 : 817.0) no description available & (o04865|plda1_vigun : 719.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Vigna unguiculata (Cowpea) & (gnl|cdd|29343 : 85.0) no description available & (reliability: 2028.0) & (original description: Putative pld, Description = Phospholipase D, PFAM = PF12357;PF00168;PF00614;PF00614)' T '11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf02001_110488-123294' '(at4g35790 : 1242.0) Encodes a protein with phospholipase D activity. Involved in phospolipase metabolism. Mutants are affected in hydrogen peroxide mediated cell death.; ARABIDOPSIS THALIANA PHOSPHOLIPASE D DELTA (ATPLDDELTA); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, phosphatidic acid metabolic process, programmed cell death; LOCATED IN: microtubule cytoskeleton, plasma membrane, vacuole, membrane; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D beta 1 (TAIR:AT2G42010.1); Has 2145 Blast hits to 1885 proteins in 404 species: Archae - 0; Bacteria - 362; Metazoa - 509; Fungi - 323; Plants - 775; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|36543 : 833.0) no description available & (o04865|plda1_vigun : 705.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Vigna unguiculata (Cowpea) & (reliability: 2484.0) & (original description: Putative pldd, Description = Phospholipase D, PFAM = PF00614;PF00614;PF12357;PF00168)' T '11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf02465_118965-126708' '(at2g42010 : 1291.0) phospholipase D (PLDbeta); phospholipase D beta 1 (PLDBETA1); FUNCTIONS IN: phospholipase D activity, protein binding, phosphatidylinositol-4,5-bisphosphate binding; INVOLVED IN: response to cadmium ion, defense response to bacterium, incompatible interaction; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D beta 2 (TAIR:AT4G00240.1); Has 42228 Blast hits to 24253 proteins in 1246 species: Archae - 34; Bacteria - 3967; Metazoa - 15807; Fungi - 8808; Plants - 7882; Viruses - 972; Other Eukaryotes - 4758 (source: NCBI BLink). & (gnl|cdd|36543 : 903.0) no description available & (p93400|plda1_tobac : 735.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29343 : 90.4) no description available & (reliability: 2582.0) & (original description: Putative pld, Description = Phospholipase D, PFAM = PF12357;PF00614;PF13091;PF00168)' T '11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf02734_92641-126133' '(at2g42010 : 1419.0) phospholipase D (PLDbeta); phospholipase D beta 1 (PLDBETA1); FUNCTIONS IN: phospholipase D activity, protein binding, phosphatidylinositol-4,5-bisphosphate binding; INVOLVED IN: response to cadmium ion, defense response to bacterium, incompatible interaction; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D beta 2 (TAIR:AT4G00240.1); Has 42228 Blast hits to 24253 proteins in 1246 species: Archae - 34; Bacteria - 3967; Metazoa - 15807; Fungi - 8808; Plants - 7882; Viruses - 972; Other Eukaryotes - 4758 (source: NCBI BLink). & (gnl|cdd|36543 : 905.0) no description available & (q41142|plda1_ricco : 718.0) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Ricinus communis (Castor bean) & (gnl|cdd|29343 : 99.6) no description available & (reliability: 2838.0) & (original description: Putative pld, Description = Phospholipase D, PFAM = PF00168;PF12357;PF00614;PF00614)' T '11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf03307_149092-157447' '(q41142|plda1_ricco : 1381.0) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Ricinus communis (Castor bean) & (at1g52570 : 1325.0) member of C2-PLD subfamily; phospholipase D alpha 2 (PLDALPHA2); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: phosphatidylcholine metabolic process, metabolic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D alpha 1 (TAIR:AT3G15730.1); Has 2026 Blast hits to 1555 proteins in 414 species: Archae - 2; Bacteria - 579; Metazoa - 311; Fungi - 419; Plants - 577; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|36543 : 867.0) no description available & (gnl|cdd|29343 : 94.2) no description available & (reliability: 2650.0) & (original description: Putative PLD2, Description = Phospholipase D alpha 2, PFAM = PF12357;PF00614;PF00614;PF00168)' T '11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf03778_202061-207928' '(at1g55180 : 932.0) member of C2-PLD. subfamily Represents a phospholipase D (PLD) gene with four exons, hence it is a member of the alpha class. Its amino acid sequence is quite different from other PLDs, therefore it might possess unique structural and/or catalytic properties.; phospholipase D alpha 4 (PLDEPSILON); CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D alpha 1 (TAIR:AT3G15730.1); Has 1995 Blast hits to 1528 proteins in 409 species: Archae - 2; Bacteria - 580; Metazoa - 308; Fungi - 419; Plants - 534; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (gnl|cdd|36543 : 633.0) no description available & (q43270|plda1_maize : 596.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Zea mays (Maize) & (reliability: 1864.0) & (original description: Putative plda2, Description = Phospholipase D, PFAM = PF00614;PF13091;PF00168;PF12357)' T '11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf03778_202620-207844' '(at1g55180 : 727.0) member of C2-PLD. subfamily Represents a phospholipase D (PLD) gene with four exons, hence it is a member of the alpha class. Its amino acid sequence is quite different from other PLDs, therefore it might possess unique structural and/or catalytic properties.; phospholipase D alpha 4 (PLDEPSILON); CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D alpha 1 (TAIR:AT3G15730.1); Has 1995 Blast hits to 1528 proteins in 409 species: Archae - 2; Bacteria - 580; Metazoa - 308; Fungi - 419; Plants - 534; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (q43270|plda1_maize : 535.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Zea mays (Maize) & (gnl|cdd|36543 : 519.0) no description available & (reliability: 1454.0) & (original description: Putative plda2, Description = Phospholipase D, PFAM = PF12357;PF13091;PF00614)' T '11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf03865_46319-58407' '(at4g35790 : 1182.0) Encodes a protein with phospholipase D activity. Involved in phospolipase metabolism. Mutants are affected in hydrogen peroxide mediated cell death.; ARABIDOPSIS THALIANA PHOSPHOLIPASE D DELTA (ATPLDDELTA); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, phosphatidic acid metabolic process, programmed cell death; LOCATED IN: microtubule cytoskeleton, plasma membrane, vacuole, membrane; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D beta 1 (TAIR:AT2G42010.1); Has 2145 Blast hits to 1885 proteins in 404 species: Archae - 0; Bacteria - 362; Metazoa - 509; Fungi - 323; Plants - 775; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|36543 : 827.0) no description available & (q43007|plda1_orysa : 714.0) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Oryza sativa (Rice) & (reliability: 2364.0) & (original description: Putative pldd, Description = Phospholipase D, PFAM = PF12357;PF00168;PF00614;PF00614)' T '11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf04021_490443-498895' '(at2g42010 : 1303.0) phospholipase D (PLDbeta); phospholipase D beta 1 (PLDBETA1); FUNCTIONS IN: phospholipase D activity, protein binding, phosphatidylinositol-4,5-bisphosphate binding; INVOLVED IN: response to cadmium ion, defense response to bacterium, incompatible interaction; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D beta 2 (TAIR:AT4G00240.1); Has 42228 Blast hits to 24253 proteins in 1246 species: Archae - 34; Bacteria - 3967; Metazoa - 15807; Fungi - 8808; Plants - 7882; Viruses - 972; Other Eukaryotes - 4758 (source: NCBI BLink). & (gnl|cdd|36543 : 881.0) no description available & (q43270|plda1_maize : 658.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Zea mays (Maize) & (gnl|cdd|29343 : 92.7) no description available & (reliability: 2606.0) & (original description: Putative pld, Description = Phospholipase D, PFAM = PF12357;PF00168;PF00614;PF00614)' T '11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf07382_178945-184149' '(p93400|plda1_tobac : 1139.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Nicotiana tabacum (Common tobacco) & (at1g52570 : 952.0) member of C2-PLD subfamily; phospholipase D alpha 2 (PLDALPHA2); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: phosphatidylcholine metabolic process, metabolic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D alpha 1 (TAIR:AT3G15730.1); Has 2026 Blast hits to 1555 proteins in 414 species: Archae - 2; Bacteria - 579; Metazoa - 311; Fungi - 419; Plants - 577; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|36543 : 566.0) no description available & (gnl|cdd|29343 : 110.0) no description available & (reliability: 1904.0) & (original description: Putative pld, Description = Phospholipase D, PFAM = PF00614;PF00168)' T '11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf09882_74454-80484' '(p93400|plda1_tobac : 1450.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Nicotiana tabacum (Common tobacco) & (at3g15730 : 1332.0) Encodes phospholipase D alpha 1 (PLD alpha 1). Positive regulator of abscisic acid (ABA) mediated stomatal movements. PLD alpha 1 plays an important role in seed deterioration and aging in Arabidopsis.; phospholipase D alpha 1 (PLDALPHA1); FUNCTIONS IN: phospholipase D activity, phosphatidylinositol-4,5-bisphosphate binding; INVOLVED IN: response to cadmium ion, fatty acid metabolic process, seed germination, regulation of stomatal movement, positive regulation of abscisic acid mediated signaling pathway; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008), Phospholipase D, plant (InterPro:IPR011402); BEST Arabidopsis thaliana protein match is: phospholipase D alpha 2 (TAIR:AT1G52570.1); Has 2073 Blast hits to 1588 proteins in 412 species: Archae - 0; Bacteria - 593; Metazoa - 344; Fungi - 417; Plants - 575; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (gnl|cdd|36543 : 862.0) no description available & (gnl|cdd|29343 : 106.0) no description available & (reliability: 2664.0) & (original description: Putative PLDBETA2, Description = Phospholipase D beta 2, PFAM = PF00614;PF00614;PF12357;PF00168)' T '11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf12609_196481-201951' '(q41142|plda1_ricco : 1148.0) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Ricinus communis (Castor bean) & (at3g15730 : 1139.0) Encodes phospholipase D alpha 1 (PLD alpha 1). Positive regulator of abscisic acid (ABA) mediated stomatal movements. PLD alpha 1 plays an important role in seed deterioration and aging in Arabidopsis.; phospholipase D alpha 1 (PLDALPHA1); FUNCTIONS IN: phospholipase D activity, phosphatidylinositol-4,5-bisphosphate binding; INVOLVED IN: response to cadmium ion, fatty acid metabolic process, seed germination, regulation of stomatal movement, positive regulation of abscisic acid mediated signaling pathway; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008), Phospholipase D, plant (InterPro:IPR011402); BEST Arabidopsis thaliana protein match is: phospholipase D alpha 2 (TAIR:AT1G52570.1); Has 2073 Blast hits to 1588 proteins in 412 species: Archae - 0; Bacteria - 593; Metazoa - 344; Fungi - 417; Plants - 575; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (gnl|cdd|36543 : 816.0) no description available & (gnl|cdd|29343 : 100.0) no description available & (reliability: 2278.0) & (original description: Putative PLD1, Description = Phospholipase D alpha 1, PFAM = PF00614;PF00614;PF00168;PF12357)' T '11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf14273_161113-169733' '(at4g35790 : 1301.0) Encodes a protein with phospholipase D activity. Involved in phospolipase metabolism. Mutants are affected in hydrogen peroxide mediated cell death.; ARABIDOPSIS THALIANA PHOSPHOLIPASE D DELTA (ATPLDDELTA); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, phosphatidic acid metabolic process, programmed cell death; LOCATED IN: microtubule cytoskeleton, plasma membrane, vacuole, membrane; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D beta 1 (TAIR:AT2G42010.1); Has 2145 Blast hits to 1885 proteins in 404 species: Archae - 0; Bacteria - 362; Metazoa - 509; Fungi - 323; Plants - 775; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|36543 : 828.0) no description available & (p93400|plda1_tobac : 706.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Nicotiana tabacum (Common tobacco) & (reliability: 2602.0) & (original description: Putative pldd, Description = Phospholipase D, PFAM = PF12357;PF00168;PF00614;PF00614)' T '11.9.3.1' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase D' 'niben101scf16022_520068-527642' '(at2g42010 : 1310.0) phospholipase D (PLDbeta); phospholipase D beta 1 (PLDBETA1); FUNCTIONS IN: phospholipase D activity, protein binding, phosphatidylinositol-4,5-bisphosphate binding; INVOLVED IN: response to cadmium ion, defense response to bacterium, incompatible interaction; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D beta 2 (TAIR:AT4G00240.1); Has 42228 Blast hits to 24253 proteins in 1246 species: Archae - 34; Bacteria - 3967; Metazoa - 15807; Fungi - 8808; Plants - 7882; Viruses - 972; Other Eukaryotes - 4758 (source: NCBI BLink). & (gnl|cdd|36543 : 915.0) no description available & (p93400|plda1_tobac : 734.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29343 : 88.4) no description available & (reliability: 2620.0) & (original description: Putative pld, Description = Phospholipase D, PFAM = PF12357;PF00168;PF00614;PF00614)' T '11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'nbv0.3scaffold4737_62810-67134' '(at3g15650 : 280.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, carboxylesterase activity; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G52700.1). & (gnl|cdd|37323 : 181.0) no description available & (gnl|cdd|65966 : 120.0) no description available & (reliability: 560.0) & (original description: Putative At3g15650, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF02230;PF02230)' T '11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'nbv0.3scaffold16772_1-7491' '(at4g22300 : 342.0) encodes a carboxylesterase that inhibits AvrBsT-triggered phenotypes in Arabidopsis; SUPPRESSOR OF AVRBST-ELICITED RESISTANCE 1 (SOBER1); FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: defense response, incompatible interaction, regulation of plant-type hypersensitive response; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G22305.1); Has 4896 Blast hits to 2727 proteins in 833 species: Archae - 28; Bacteria - 2331; Metazoa - 701; Fungi - 503; Plants - 344; Viruses - 0; Other Eukaryotes - 989 (source: NCBI BLink). & (gnl|cdd|37323 : 196.0) no description available & (gnl|cdd|65966 : 150.0) no description available & (reliability: 684.0) & (original description: Putative SOBER1, Description = Carboxylesterase SOBER1, PFAM = PF02230)' T '11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'nbv0.3scaffold39534_88-3092' '(gnl|cdd|36728 : 218.0) no description available & (at5g16080 : 193.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 174.0) no description available & (q6l545|gid1_orysa : 125.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 364.0) & (original description: Putative hsr203J, Description = Cell death associated protein, PFAM = PF07859)' T '11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'nbv0.5scaffold25_30947-33977' '(gnl|cdd|36728 : 220.0) no description available & (at5g16080 : 191.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 181.0) no description available & (q6l545|gid1_orysa : 124.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 364.0) & (original description: Putative cda1, Description = Cell death-associated protein 1, PFAM = PF07859)' T '11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'nbv0.5scaffold310_329430-334201' '(at3g15650 : 370.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, carboxylesterase activity; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G52700.1). & (gnl|cdd|37323 : 234.0) no description available & (gnl|cdd|65966 : 149.0) no description available & (reliability: 740.0) & (original description: Putative At1g52700, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF02230)' T '11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'nbv0.5scaffold2418_297477-318437' '(gnl|cdd|36728 : 236.0) no description available & (at5g16080 : 206.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 173.0) no description available & (q6l545|gid1_orysa : 118.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 388.0) & (original description: Putative CXE2, Description = CXE carboxylesterase, PFAM = PF07859)' T '11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben044scf00000729ctg007_6777-9781' '(gnl|cdd|36728 : 224.0) no description available & (at5g16080 : 190.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 180.0) no description available & (q6l545|gid1_orysa : 124.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 364.0) & (original description: Putative hsr203J, Description = HSR203J, PFAM = PF07859)' T '11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben044scf00031166ctg003_1534-5056' '(gnl|cdd|36728 : 224.0) no description available & (at5g16080 : 194.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 179.0) no description available & (q6l545|gid1_orysa : 129.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 372.0) & (original description: Putative cda1, Description = Cell death-associated protein 1, PFAM = PF07859)' T '11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf00123_715844-721494' '(at1g52700 : 366.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, carboxylesterase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G15650.2); Has 2146 Blast hits to 2133 proteins in 591 species: Archae - 4; Bacteria - 780; Metazoa - 345; Fungi - 280; Plants - 195; Viruses - 0; Other Eukaryotes - 542 (source: NCBI BLink). & (gnl|cdd|37323 : 234.0) no description available & (gnl|cdd|65966 : 156.0) no description available & (reliability: 732.0) & (original description: Putative At1g52700, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF02230)' T '11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf00349_261963-267453' '(at5g20060 : 343.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G52700.1); Has 2121 Blast hits to 2107 proteins in 636 species: Archae - 4; Bacteria - 835; Metazoa - 351; Fungi - 284; Plants - 201; Viruses - 0; Other Eukaryotes - 446 (source: NCBI BLink). & (gnl|cdd|37323 : 217.0) no description available & (gnl|cdd|65966 : 143.0) no description available & (reliability: 686.0) & (original description: Putative LOC100283662, Description = Acyl-protein thioesterase 2, PFAM = PF02230)' T '11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf00577_88450-93705' '(at1g68620 : 357.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 17 (TAIR:AT5G16080.1); Has 11100 Blast hits to 11083 proteins in 1670 species: Archae - 110; Bacteria - 6437; Metazoa - 919; Fungi - 1098; Plants - 1346; Viruses - 3; Other Eukaryotes - 1187 (source: NCBI BLink). & (gnl|cdd|36728 : 267.0) no description available & (gnl|cdd|87389 : 193.0) no description available & (q6l545|gid1_orysa : 139.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 714.0) & (original description: Putative CXE6, Description = Probable carboxylesterase 6, PFAM = PF07859)' T '11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf02408_402906-405853' '(at1g47480 : 298.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 8596 Blast hits to 8578 proteins in 1414 species: Archae - 104; Bacteria - 4918; Metazoa - 486; Fungi - 808; Plants - 1365; Viruses - 3; Other Eukaryotes - 912 (source: NCBI BLink). & (gnl|cdd|36728 : 289.0) no description available & (gnl|cdd|87389 : 148.0) no description available & (q6l545|gid1_orysa : 134.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 596.0) & (original description: Putative HIDM, Description = 2-hydroxyisoflavanone dehydratase, PFAM = PF07859)' T '11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf02408_424427-427757' '(gnl|cdd|36728 : 260.0) no description available & (at3g48690 : 252.0) Encodes a protein with carboxylesterase whose activity was tested using both pNA and 2,4-D-methyl.; CXE12; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: response to salt stress; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 9324 Blast hits to 9298 proteins in 1467 species: Archae - 108; Bacteria - 5259; Metazoa - 789; Fungi - 845; Plants - 1410; Viruses - 3; Other Eukaryotes - 910 (source: NCBI BLink). & (gnl|cdd|87389 : 166.0) no description available & (q6l545|gid1_orysa : 114.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 454.0) & (original description: Putative CXE13, Description = Probable carboxylesterase 13, PFAM = PF07859)' T '11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf02408_482118-485176' '(gnl|cdd|36728 : 260.0) no description available & (at1g19190 : 237.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G03550.1); Has 9471 Blast hits to 9453 proteins in 1548 species: Archae - 114; Bacteria - 5498; Metazoa - 707; Fungi - 823; Plants - 1388; Viruses - 3; Other Eukaryotes - 938 (source: NCBI BLink). & (gnl|cdd|87389 : 165.0) no description available & (q6l545|gid1_orysa : 117.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 470.0) & (original description: Putative CXE1, Description = CXE carboxylesterase, PFAM = PF07859)' T '11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf02408_505135-508082' '(gnl|cdd|36728 : 255.0) no description available & (at1g19190 : 248.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G03550.1); Has 9471 Blast hits to 9453 proteins in 1548 species: Archae - 114; Bacteria - 5498; Metazoa - 707; Fungi - 823; Plants - 1388; Viruses - 3; Other Eukaryotes - 938 (source: NCBI BLink). & (gnl|cdd|87389 : 155.0) no description available & (q6l545|gid1_orysa : 107.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 476.0) & (original description: Putative CXE7, Description = CXE carboxylesterase, PFAM = PF07859)' T '11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf02408_549936-552847' '(at3g48700 : 254.0) carboxyesterase 13 (CXE13); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48690.1); Has 10327 Blast hits to 10297 proteins in 1570 species: Archae - 114; Bacteria - 5663; Metazoa - 1261; Fungi - 886; Plants - 1402; Viruses - 3; Other Eukaryotes - 998 (source: NCBI BLink). & (gnl|cdd|36728 : 247.0) no description available & (gnl|cdd|87389 : 142.0) no description available & (q6l545|gid1_orysa : 90.1) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 508.0) & (original description: Putative CXE1, Description = CXE carboxylesterase, PFAM = PF07859)' T '11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf03209_146077-158494' '(at4g22300 : 346.0) encodes a carboxylesterase that inhibits AvrBsT-triggered phenotypes in Arabidopsis; SUPPRESSOR OF AVRBST-ELICITED RESISTANCE 1 (SOBER1); FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: defense response, incompatible interaction, regulation of plant-type hypersensitive response; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G22305.1); Has 4896 Blast hits to 2727 proteins in 833 species: Archae - 28; Bacteria - 2331; Metazoa - 701; Fungi - 503; Plants - 344; Viruses - 0; Other Eukaryotes - 989 (source: NCBI BLink). & (gnl|cdd|37323 : 193.0) no description available & (gnl|cdd|65966 : 153.0) no description available & (reliability: 692.0) & (original description: Putative At4g22300, Description = Probable carboxylesterase SOBER1-like, PFAM = PF02230)' T '11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf03832_279487-282054' '(gnl|cdd|36728 : 237.0) no description available & (at5g16080 : 209.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 179.0) no description available & (q6l545|gid1_orysa : 119.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 384.0) & (original description: Putative CXE2, Description = CXE carboxylesterase, PFAM = PF07859)' T '11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf04956_115034-117975' '(at2g03550 : 292.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 9970 Blast hits to 9948 proteins in 1554 species: Archae - 115; Bacteria - 5525; Metazoa - 1072; Fungi - 910; Plants - 1367; Viruses - 5; Other Eukaryotes - 976 (source: NCBI BLink). & (gnl|cdd|36728 : 287.0) no description available & (gnl|cdd|87389 : 150.0) no description available & (q6l545|gid1_orysa : 126.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 584.0) & (original description: Putative CXE7, Description = Probable carboxylesterase 7, PFAM = PF07859)' T '11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf05283_75787-78791' '(gnl|cdd|36728 : 214.0) no description available & (at5g16080 : 189.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 175.0) no description available & (q6l545|gid1_orysa : 120.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 356.0) & (original description: Putative hsr203J, Description = Cell death associated protein, PFAM = PF07859)' T '11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf07004_49949-53503' '(at1g47480 : 382.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 8596 Blast hits to 8578 proteins in 1414 species: Archae - 104; Bacteria - 4918; Metazoa - 486; Fungi - 808; Plants - 1365; Viruses - 3; Other Eukaryotes - 912 (source: NCBI BLink). & (gnl|cdd|36728 : 275.0) no description available & (gnl|cdd|87389 : 162.0) no description available & (q6l545|gid1_orysa : 119.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 764.0) & (original description: Putative CXE2, Description = Probable carboxylesterase 2, PFAM = PF07859)' T '11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf09372_337736-340758' '(at5g16080 : 363.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36728 : 279.0) no description available & (gnl|cdd|87389 : 190.0) no description available & (q6l545|gid1_orysa : 127.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 660.0) & (original description: Putative CXE17, Description = Probable carboxylesterase 17, PFAM = PF07859)' T '11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf13934_6570-13729' '(at5g20060 : 270.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G52700.1); Has 2121 Blast hits to 2107 proteins in 636 species: Archae - 4; Bacteria - 835; Metazoa - 351; Fungi - 284; Plants - 201; Viruses - 0; Other Eukaryotes - 446 (source: NCBI BLink). & (gnl|cdd|37323 : 143.0) no description available & (gnl|cdd|65966 : 96.5) no description available & (reliability: 540.0) & (original description: Putative F6D8.5, Description = F6D8.5, PFAM = PF02230)' T '11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf13934_6985-13825' '(at5g20060 : 272.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G52700.1); Has 2121 Blast hits to 2107 proteins in 636 species: Archae - 4; Bacteria - 835; Metazoa - 351; Fungi - 284; Plants - 201; Viruses - 0; Other Eukaryotes - 446 (source: NCBI BLink). & (gnl|cdd|37323 : 141.0) no description available & (gnl|cdd|65966 : 95.4) no description available & (reliability: 544.0) & (original description: Putative At5g20060, Description = Phospholipase/carboxylesterase family protein, PFAM = PF02230)' T '11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'niben101scf28250_51768-54757' '(at1g47480 : 295.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 8596 Blast hits to 8578 proteins in 1414 species: Archae - 104; Bacteria - 4918; Metazoa - 486; Fungi - 808; Plants - 1365; Viruses - 3; Other Eukaryotes - 912 (source: NCBI BLink). & (gnl|cdd|36728 : 257.0) no description available & (gnl|cdd|87389 : 166.0) no description available & (q6l545|gid1_orysa : 119.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 590.0) & (original description: Putative CXE1, Description = CXE protein, PFAM = PF07859)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.3scaffold3103_1248-7738' '(at1g74210 : 551.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT5G08030.1); Has 7091 Blast hits to 6951 proteins in 1731 species: Archae - 61; Bacteria - 5445; Metazoa - 267; Fungi - 122; Plants - 347; Viruses - 7; Other Eukaryotes - 842 (source: NCBI BLink). & (gnl|cdd|37469 : 169.0) no description available & (gnl|cdd|83744 : 164.0) no description available & (reliability: 1102.0) & (original description: Putative GDPD5, Description = Glycerophosphodiester phosphodiesterase GDPD5, PFAM = PF03009)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.3scaffold3735_86221-90752' '(at5g38280 : 348.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 299.0) no description available & (p17801|kpro_maize : 190.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 171.0) no description available & (reliability: 664.0) & (original description: Putative glysoja_028070, Description = Putative receptor-like protein kinase, PFAM = PF13947;PF00069)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.3scaffold4847_59137-63043' '(at1g66920 : 331.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1). & (gnl|cdd|36401 : 291.0) no description available & (p17801|kpro_maize : 198.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 165.0) no description available & (reliability: 624.0) & (original description: Putative drpk1, Description = Receptor-like kinase, PFAM = PF13947;PF00069)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.3scaffold4847_63045-66534' '(at5g38280 : 348.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 300.0) no description available & (p17801|kpro_maize : 191.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 178.0) no description available & (reliability: 670.0) & (original description: Putative glysoja_028070, Description = Putative receptor-like protein kinase, PFAM = PF00069;PF13947)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.3scaffold35280_9719-14656' '(at4g18250 : 362.0) receptor serine/threonine kinase, putative; FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, LP.02 two leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 120088 Blast hits to 117149 proteins in 4431 species: Archae - 164; Bacteria - 12523; Metazoa - 44044; Fungi - 10148; Plants - 35501; Viruses - 371; Other Eukaryotes - 17337 (source: NCBI BLink). & (gnl|cdd|36401 : 312.0) no description available & (p17801|kpro_maize : 197.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 164.0) no description available & (reliability: 706.0) & (original description: Putative Os04g0177000, Description = Os04g0177000 protein, PFAM = PF14380;PF00069)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.3scaffold35280_9776-14713' '(at5g38260 : 363.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 311.0) no description available & (p17801|kpro_maize : 197.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 164.0) no description available & (reliability: 704.0) & (original description: Putative glysoja_021226, Description = Putative receptor-like protein kinase, PFAM = PF00069;PF14380)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.3scaffold48597_1625-9058' '(at1g71340 : 373.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); Has 6308 Blast hits to 6301 proteins in 1557 species: Archae - 95; Bacteria - 5357; Metazoa - 60; Fungi - 20; Plants - 36; Viruses - 13; Other Eukaryotes - 727 (source: NCBI BLink). & (gnl|cdd|37469 : 113.0) no description available & (gnl|cdd|86214 : 101.0) no description available & (reliability: 746.0) & (original description: Putative GDPD4, Description = Glycerophosphodiester phosphodiesterase GDPD4, PFAM = PF03009)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.3scaffold78641_1412-7437' '(at1g71340 : 227.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); Has 6308 Blast hits to 6301 proteins in 1557 species: Archae - 95; Bacteria - 5357; Metazoa - 60; Fungi - 20; Plants - 36; Viruses - 13; Other Eukaryotes - 727 (source: NCBI BLink). & (gnl|cdd|37469 : 88.9) no description available & (reliability: 454.0) & (original description: Putative GDPD4, Description = Putative Glycerophosphoryl diester phosphodiesterase, PFAM = PF03009)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.5scaffold1066_241186-245814' '(at5g38280 : 330.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 290.0) no description available & (p17801|kpro_maize : 188.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 167.0) no description available & (reliability: 620.0) & (original description: Putative PGSC0003DMG400010701, Description = Stress-induced receptor-like kinase, PFAM = PF00069;PF13947)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.5scaffold1380_130405-150040' '(at5g38260 : 342.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 274.0) no description available & (p17801|kpro_maize : 194.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 170.0) no description available & (reliability: 618.0) & (original description: Putative glysoja_028070, Description = Putative receptor-like protein kinase, PFAM = PF13947;PF00069)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.5scaffold1631_131871-412560' '(at1g70250 : 312.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 214.0) no description available & (p17801|kpro_maize : 147.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 118.0) no description available & (reliability: 594.0) & (original description: Putative KK1_035972, Description = Putative receptor-like protein kinase At5g39020 family, PFAM = PF00069)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.5scaffold2318_130525-138616' '(at1g66980 : 103.0) Encodes SNC4 (suppressor of npr1-1, constitutive 4), an atypical receptor-like kinase with two predicted extracellular glycerophosphoryl diester phosphodiesterase domains.; suppressor of npr1-1 constitutive 4 (SNC4); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Protein kinase, catalytic domain (InterPro:IPR000719), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: SHV3-like 2 (TAIR:AT1G66970.1); Has 115599 Blast hits to 113492 proteins in 4573 species: Archae - 153; Bacteria - 13353; Metazoa - 42961; Fungi - 9619; Plants - 32809; Viruses - 285; Other Eukaryotes - 16419 (source: NCBI BLink). & (gnl|cdd|36401 : 87.8) no description available & (reliability: 206.0) & (original description: Putative PGSC0003DMG400010495, Description = Receptor-like kinase, PFAM = PF07714)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.5scaffold3655_87658-91595' '(at5g38280 : 355.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 297.0) no description available & (p17801|kpro_maize : 192.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 169.0) no description available & (reliability: 666.0) & (original description: Putative PGSC0003DMG400010484, Description = Stress-induced receptor-like kinase, PFAM = PF00069)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.5scaffold3655_155523-159639' '(at5g38280 : 347.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 300.0) no description available & (p17801|kpro_maize : 191.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 178.0) no description available & (reliability: 670.0) & (original description: Putative PGSC0003DMG400020899, Description = Stress-induced receptor-like kinase, PFAM = PF00069;PF13947)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.5scaffold4089_106804-196612' '(at4g26690 : 490.0) Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development.; SHAVEN 3 (SHV3); FUNCTIONS IN: glycerophosphodiester phosphodiesterase activity, kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: SHV3-like 2 (TAIR:AT1G66970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37469 : 213.0) no description available & (gnl|cdd|86214 : 88.2) no description available & (reliability: 980.0) & (original description: Putative BnaA03g48210D, Description = BnaA03g48210D protein, PFAM = PF03009)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'nbv0.5scaffold5988_42534-48697' '(at5g58170 : 605.0) SHV3-like 5 (SVL5); FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: SHV3-like 4 (TAIR:AT5G58050.1); Has 2139 Blast hits to 1578 proteins in 572 species: Archae - 0; Bacteria - 1688; Metazoa - 15; Fungi - 4; Plants - 324; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (gnl|cdd|37469 : 165.0) no description available & (reliability: 1210.0) & (original description: Putative GDPDL7, Description = Glycerophosphodiester phosphodiesterase GDPDL7, PFAM = PF03009;PF03009)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben044scf00005266ctg002_1-4145' '(at5g38280 : 348.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 300.0) no description available & (p17801|kpro_maize : 191.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 177.0) no description available & (reliability: 672.0) & (original description: Putative glysoja_033594, Description = Putative receptor-like protein kinase, PFAM = PF13947;PF00069)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben044scf00005266ctg003_1-2204' '(at1g70250 : 281.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 248.0) no description available & (p17801|kpro_maize : 160.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 138.0) no description available & (reliability: 530.0) & (original description: Putative drpk1, Description = Receptor-like kinase, PFAM = PF00069)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben044scf00005266ctg007_7847-12072' '(at5g38280 : 351.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 298.0) no description available & (p17801|kpro_maize : 191.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 170.0) no description available & (reliability: 666.0) & (original description: Putative PGSC0003DMG400010484, Description = Stress-induced receptor-like kinase, PFAM = PF13947;PF00069)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben044scf00005963ctg017_1005-5633' '(at5g38280 : 330.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 290.0) no description available & (p17801|kpro_maize : 188.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 167.0) no description available & (reliability: 620.0) & (original description: Putative PGSC0003DMG400031485, Description = Stress-induced receptor-like kinase, PFAM = PF13947;PF00069)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben044scf00026280ctg006_1-2254' '(gnl|cdd|36401 : 288.0) no description available & (at5g38280 : 286.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p17801|kpro_maize : 170.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 170.0) no description available & (reliability: 520.0) & (original description: Putative glysoja_036704, Description = Putative receptor-like protein kinase, PFAM = PF00069)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben044scf00029680ctg004_2945-6016' '(at1g67000 : 318.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66930.1); Has 113853 Blast hits to 112150 proteins in 4512 species: Archae - 151; Bacteria - 11870; Metazoa - 43414; Fungi - 9147; Plants - 32426; Viruses - 293; Other Eukaryotes - 16552 (source: NCBI BLink). & (gnl|cdd|36401 : 288.0) no description available & (p17801|kpro_maize : 196.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 165.0) no description available & (reliability: 620.0) & (original description: Putative drpk1, Description = Receptor-like kinase, PFAM = PF00069)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben044scf00049244ctg001_1-4307' '(at1g74210 : 504.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT5G08030.1); Has 7091 Blast hits to 6951 proteins in 1731 species: Archae - 61; Bacteria - 5445; Metazoa - 267; Fungi - 122; Plants - 347; Viruses - 7; Other Eukaryotes - 842 (source: NCBI BLink). & (gnl|cdd|83744 : 142.0) no description available & (gnl|cdd|37469 : 140.0) no description available & (reliability: 1008.0) & (original description: Putative GDPD5, Description = Glycerophosphodiester phosphodiesterase GDPD5, PFAM = PF03009)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben044scf00055754ctg000_3233-6569' '(at1g70250 : 309.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 213.0) no description available & (p17801|kpro_maize : 145.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 116.0) no description available & (reliability: 588.0) & (original description: Putative KK1_035972, Description = Putative receptor-like protein kinase At5g39020 family, PFAM = PF00069)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101ctg15354_819-3947' '(at5g38280 : 156.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 152.0) no description available & (p17801|kpro_maize : 116.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 101.0) no description available & (reliability: 286.0) & (original description: Putative PGSC0003DMG400010499, Description = PR5-like receptor kinase, PFAM = PF13947;PF07714)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf00307_128035-131150' '(at1g70250 : 385.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 293.0) no description available & (p17801|kpro_maize : 197.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 166.0) no description available & (reliability: 752.0) & (original description: Putative Os04g0177000, Description = Os04g0177000 protein, PFAM = PF07714)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf00445_173322-178257' '(at3g02040 : 399.0) senescence-related gene 3 (SRG3); FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT5G41080.1); Has 1727 Blast hits to 1696 proteins in 532 species: Archae - 28; Bacteria - 1003; Metazoa - 245; Fungi - 173; Plants - 101; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|37632 : 189.0) no description available & (gnl|cdd|86214 : 142.0) no description available & (reliability: 798.0) & (original description: Putative GDPD1, Description = Glycerophosphodiester phosphodiesterase GDPD1, chloroplastic, PFAM = PF03009)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf00495_128150-135396' '(at1g74210 : 576.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT5G08030.1); Has 7091 Blast hits to 6951 proteins in 1731 species: Archae - 61; Bacteria - 5445; Metazoa - 267; Fungi - 122; Plants - 347; Viruses - 7; Other Eukaryotes - 842 (source: NCBI BLink). & (gnl|cdd|37469 : 182.0) no description available & (gnl|cdd|83744 : 167.0) no description available & (reliability: 1152.0) & (original description: Putative GDPD5, Description = Glycerophosphodiester phosphodiesterase GDPD5, PFAM = PF03009)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf00774_111480-118194' '(at5g58170 : 621.0) SHV3-like 5 (SVL5); FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: SHV3-like 4 (TAIR:AT5G58050.1); Has 2139 Blast hits to 1578 proteins in 572 species: Archae - 0; Bacteria - 1688; Metazoa - 15; Fungi - 4; Plants - 324; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (gnl|cdd|37469 : 167.0) no description available & (reliability: 1242.0) & (original description: Putative GDPDL7, Description = Glycerophosphodiester phosphodiesterase GDPDL7, PFAM = PF03009;PF03009)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf01055_14826-19154' '(at3g02040 : 498.0) senescence-related gene 3 (SRG3); FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT5G41080.1); Has 1727 Blast hits to 1696 proteins in 532 species: Archae - 28; Bacteria - 1003; Metazoa - 245; Fungi - 173; Plants - 101; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|37632 : 225.0) no description available & (gnl|cdd|86214 : 129.0) no description available & (reliability: 996.0) & (original description: Putative GDPD1, Description = Glycerophosphodiester phosphodiesterase GDPD1, chloroplastic, PFAM = PF03009)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf02290_196298-200378' '(at1g66920 : 321.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1). & (gnl|cdd|36401 : 289.0) no description available & (p17801|kpro_maize : 166.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 163.0) no description available & (reliability: 580.0) & (original description: Putative RKO_3, Description = Ser/Thr receptor-like kinase, putative, expressed, PFAM = PF00069;PF13947)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf04205_218355-228493' '(at5g55480 : 847.0) Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development.; SHV3-like 1 (SVL1); FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: trichome differentiation, cell wall pectin metabolic process, glycerol metabolic process, guard cell morphogenesis, plant-type cell wall cellulose metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterase family protein (TAIR:AT4G26690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37469 : 231.0) no description available & (gnl|cdd|86214 : 85.5) no description available & (reliability: 1694.0) & (original description: Putative GDPDL1, Description = Glycerophosphodiester phosphodiesterase GDPDL1, PFAM = PF03009;PF03009)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf04551_271582-281731' '(at5g55480 : 838.0) Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development.; SHV3-like 1 (SVL1); FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: trichome differentiation, cell wall pectin metabolic process, glycerol metabolic process, guard cell morphogenesis, plant-type cell wall cellulose metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterase family protein (TAIR:AT4G26690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37469 : 233.0) no description available & (gnl|cdd|86214 : 85.1) no description available & (reliability: 1676.0) & (original description: Putative GDPDL3, Description = Glycerophosphodiester phosphodiesterase GDPDL3, PFAM = PF03009;PF03009)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf04869_650988-655203' '(at5g38280 : 348.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 299.0) no description available & (p17801|kpro_maize : 190.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 171.0) no description available & (reliability: 664.0) & (original description: Putative PGSC0003DMG400031485, Description = Stress-induced receptor-like kinase, PFAM = PF13947;PF00069)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf04943_232373-237340' '(at5g38260 : 363.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 312.0) no description available & (p17801|kpro_maize : 197.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 164.0) no description available & (reliability: 704.0) & (original description: Putative glysoja_021226, Description = Putative receptor-like protein kinase, PFAM = PF00069;PF14380)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf05731_14519-116736' '(at1g70250 : 311.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 215.0) no description available & (p17801|kpro_maize : 147.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 119.0) no description available & (reliability: 592.0) & (original description: Putative glysoja_019068, Description = Putative receptor-like protein kinase, PFAM = PF00069)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf07187_8249-17439' '(at4g26690 : 826.0) Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development.; SHAVEN 3 (SHV3); FUNCTIONS IN: glycerophosphodiester phosphodiesterase activity, kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: SHV3-like 2 (TAIR:AT1G66970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37469 : 232.0) no description available & (gnl|cdd|86214 : 87.8) no description available & (reliability: 1652.0) & (original description: Putative GDPDL3, Description = Glycerophosphodiester phosphodiesterase GDPDL3, PFAM = PF03009)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf07187_11519-20531' '(at5g55480 : 537.0) Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development.; SHV3-like 1 (SVL1); FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: trichome differentiation, cell wall pectin metabolic process, glycerol metabolic process, guard cell morphogenesis, plant-type cell wall cellulose metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterase family protein (TAIR:AT4G26690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37469 : 117.0) no description available & (reliability: 1074.0) & (original description: Putative MRH5, Description = Putative glycerophosphoryl diester phosphodiesterase 3, PFAM = PF03009)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf11071_269562-273711' '(at1g66910 : 382.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66930.1); Has 113951 Blast hits to 112305 proteins in 4393 species: Archae - 178; Bacteria - 12361; Metazoa - 42729; Fungi - 9627; Plants - 32494; Viruses - 324; Other Eukaryotes - 16238 (source: NCBI BLink). & (gnl|cdd|36401 : 298.0) no description available & (p17801|kpro_maize : 181.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 169.0) no description available & (reliability: 720.0) & (original description: Putative Sb03g006765, Description = Putative uncharacterized protein Sb03g006765, PFAM = PF14380;PF00069)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf11991_731-7462' '(at5g58170 : 620.0) SHV3-like 5 (SVL5); FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: SHV3-like 4 (TAIR:AT5G58050.1); Has 2139 Blast hits to 1578 proteins in 572 species: Archae - 0; Bacteria - 1688; Metazoa - 15; Fungi - 4; Plants - 324; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (gnl|cdd|37469 : 166.0) no description available & (gnl|cdd|86214 : 80.5) no description available & (reliability: 1240.0) & (original description: Putative GDPDL7, Description = Glycerophosphodiester phosphodiesterase GDPDL7, PFAM = PF03009;PF03009)' T '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'niben101scf13230_176207-188035' '(at1g71340 : 363.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); Has 6308 Blast hits to 6301 proteins in 1557 species: Archae - 95; Bacteria - 5357; Metazoa - 60; Fungi - 20; Plants - 36; Viruses - 13; Other Eukaryotes - 727 (source: NCBI BLink). & (gnl|cdd|37469 : 108.0) no description available & (gnl|cdd|30929 : 101.0) no description available & (reliability: 726.0) & (original description: Putative GDPD4, Description = Glycerophosphodiester phosphodiesterase GDPD4, PFAM = PF03009)' T '11.9.3.4' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase A2' 'niben101scf02816_61539-71995' '(at2g19690 : 155.0) One of four PLA2 genes in Arabidopsis. Involved in stomatal opening in response to light. Expressed in guard cells.; phospholipase A2-beta (PLA2-BETA); FUNCTIONS IN: phospholipase A2 activity, calcium ion binding; INVOLVED IN: response to light stimulus, regulation of stomatal movement; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: vascular tissue, leaf mesophyll, guard cell; CONTAINS InterPro DOMAIN/s: Phospholipase A2, active site (InterPro:IPR013090), Phospholipase A2 (InterPro:IPR016090), Phospholipase A2, eukaryotic (InterPro:IPR001211); BEST Arabidopsis thaliana protein match is: Phospholipase A2 family protein (TAIR:AT4G29460.1). & (gnl|cdd|80306 : 128.0) no description available & (reliability: 310.0) & (original description: Putative PLA2, Description = Phospholipase A2 family protein, PFAM = )' T '11.9.3.4' 'lipid metabolism.lipid degradation.lysophospholipases.phospholipase A2' 'niben101scf03284_802356-807190' '(gnl|cdd|80306 : 172.0) no description available & (at2g06925 : 152.0) Encodes a secretory phospholipase A2 enzyme, which specifically hydrolyzes the sn-2 position of phospholipids. The enzyme has a preference towards linoleoyl acyl chain over palmitoyl acyl chain. It also has a slight preference for phosphatidylcholine over phosphatidylethanolamine.; PLA2-ALPHA; FUNCTIONS IN: phospholipase A2 activity; INVOLVED IN: phospholipid metabolic process, lipid catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase A2 (InterPro:IPR016090), Phospholipase A2, active site (InterPro:IPR013090), Phospholipase A2, eukaryotic (InterPro:IPR001211); BEST Arabidopsis thaliana protein match is: Phospholipase A2 family protein (TAIR:AT4G29470.1); Has 123 Blast hits to 123 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 0; Plants - 110; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative t2pla2, Description = Phospholipase A2 family protein, PFAM = )' T '11.9.3.5' 'lipid metabolism.lipid degradation.lysophospholipases.phosphoinositide phospholipase C' 'niben101scf00585_227949-239869' '(at5g66020 : 976.0) Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. non-consensus AT donor splice site at exon 7, TA donor splice site at exon 10, AT acceptor splice at exon 13.; SUPPRESSOR OF ACTIN 1B (ATSAC1B); CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT3G51460.1); Has 1740 Blast hits to 1632 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 569; Fungi - 574; Plants - 290; Viruses - 0; Other Eukaryotes - 307 (source: NCBI BLink). & (gnl|cdd|37100 : 710.0) no description available & (gnl|cdd|34909 : 331.0) no description available & (reliability: 1920.0) & (original description: Putative SAC6, Description = Phosphoinositide phosphatase SAC6, PFAM = PF02383)' T '11.9.3.5' 'lipid metabolism.lipid degradation.lysophospholipases.phosphoinositide phospholipase C' 'niben101scf01163_470506-483695' '(at3g03530 : 667.0) PHOSPHOESTERASE FAMILY PROTEIN, NPC4 is significantly induced upon phosphate starvation and plays an important role in the supply of inorganic phosphate and diacylglycerol from membrane-phospholipids during phosphate deprivation.; non-specific phospholipase C4 (NPC4); FUNCTIONS IN: hydrolase activity, acting on ester bonds, phospholipase C activity; INVOLVED IN: phospholipid catabolic process; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C5 (TAIR:AT3G03540.1); Has 2107 Blast hits to 2050 proteins in 380 species: Archae - 32; Bacteria - 1750; Metazoa - 0; Fungi - 127; Plants - 153; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|67785 : 298.0) no description available & (reliability: 1334.0) & (original description: Putative NPC4, Description = Non-specific phospholipase C4, PFAM = PF04185)' T '11.9.3.5' 'lipid metabolism.lipid degradation.lysophospholipases.phosphoinositide phospholipase C' 'niben101scf02155_78958-84312' '(at3g48610 : 782.0) non-specific phospholipase C6 (NPC6); FUNCTIONS IN: hydrolase activity, acting on ester bonds; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C1 (TAIR:AT1G07230.1); Has 2244 Blast hits to 2129 proteins in 399 species: Archae - 32; Bacteria - 1880; Metazoa - 0; Fungi - 127; Plants - 152; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|67785 : 306.0) no description available & (reliability: 1564.0) & (original description: Putative NPC6, Description = Non-specific phospholipase C6, PFAM = PF04185)' T '11.9.3.5' 'lipid metabolism.lipid degradation.lysophospholipases.phosphoinositide phospholipase C' 'niben101scf02203_345243-369957' '(at5g66020 : 976.0) Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. non-consensus AT donor splice site at exon 7, TA donor splice site at exon 10, AT acceptor splice at exon 13.; SUPPRESSOR OF ACTIN 1B (ATSAC1B); CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT3G51460.1); Has 1740 Blast hits to 1632 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 569; Fungi - 574; Plants - 290; Viruses - 0; Other Eukaryotes - 307 (source: NCBI BLink). & (gnl|cdd|37100 : 714.0) no description available & (gnl|cdd|34909 : 333.0) no description available & (reliability: 1934.0) & (original description: Putative SAC7, Description = Phosphoinositide phosphatase SAC7, PFAM = PF02383)' T '11.9.3.5' 'lipid metabolism.lipid degradation.lysophospholipases.phosphoinositide phospholipase C' 'niben101scf05618_311915-316267' '(at1g13680 : 446.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phospholipase C activity, phosphoric diester hydrolase activity; INVOLVED IN: intracellular signaling pathway, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT1G49740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 892.0) & (original description: Putative Sb01g032510, Description = Putative uncharacterized protein Sb01g032510, PFAM = )' T '11.9.4' 'lipid metabolism.lipid degradation.beta-oxidation' '' '' '11.9.4.2' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH' 'nbv0.3scaffold59027_1362-10949' '(at3g06810 : 1249.0) Encodes a protein with similarity to acyl-CoA dehydrogenases. Mutations in IBR3 render plants resistant to indole-3-butryic acid, a putative storage form of the biologically active auxin IAA (indole-3-acetic acid). IBR3 is hypothesized to carry out the second step in a β-oxidation-like process of IBA metabolism in Arabidopsis. Though its subcellular location has not been determined, IBR3 has a peroxisomal targeting sequence and two other putative IBA metabolic enzymes (IBR1 and IBR10) can be found in this organelle. No specific enzymatic activity has been documented for IBR3, but double mutant analyses with CHY1 argue against a role for IBR3 in general fatty acid β-oxidation.; IBA-RESPONSE 3 (IBR3); FUNCTIONS IN: acyl-CoA dehydrogenase activity, oxidoreductase activity; INVOLVED IN: root hair elongation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075), Protein kinase-like domain (InterPro:IPR011009), Acyl-CoA dehydrogenase, N-terminal (InterPro:IPR006092), Aminoglycoside phosphotransferase (InterPro:IPR002575); BEST Arabidopsis thaliana protein match is: isovaleryl-CoA-dehydrogenase (TAIR:AT3G45300.1); Has 35245 Blast hits to 35197 proteins in 1774 species: Archae - 552; Bacteria - 22616; Metazoa - 1388; Fungi - 871; Plants - 174; Viruses - 0; Other Eukaryotes - 9644 (source: NCBI BLink). & (gnl|cdd|29655 : 614.0) no description available & (gnl|cdd|36682 : 608.0) no description available & (q9fs88|ivd1_soltu : 95.1) Isovaleryl-CoA dehydrogenase 1, mitochondrial precursor (EC 1.3.99.10) (IVD 1) - Solanum tuberosum (Potato) & (reliability: 2498.0) & (original description: Putative IBR3, Description = Probable acyl-CoA dehydrogenase IBR3, PFAM = PF01636;PF02770;PF00441;PF02771)' T '11.9.4.2' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH' 'nbv0.5scaffold387_29432-41043' '(at4g16760 : 1138.0) Encodes a medium to long-chain acyl-CoA oxidase. Catalyzes the first step of fatty acid beta-oxidation. Involved in jasmonate biosynthesis. Gene expression is induced by wounding, drought stress, abscisic acid, and jasmonate.; acyl-CoA oxidase 1 (ACX1); CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA oxidase (InterPro:IPR012258), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA oxidase, C-terminal (InterPro:IPR002655), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075); BEST Arabidopsis thaliana protein match is: acyl-CoA oxidase 5 (TAIR:AT2G35690.1). & (gnl|cdd|35358 : 875.0) no description available & (gnl|cdd|73248 : 593.0) no description available & (o64894|acox2_cucma : 275.0) Acyl-coenzyme A oxidase, peroxisomal precursor (EC 1.3.3.6) (AOX) (Long-chain acyl-CoA oxidase) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 2276.0) & (original description: Putative ACX1, Description = Peroxisomal acyl-coenzyme A oxidase 1, PFAM = PF01756;PF14749;PF02770)' T '11.9.4.2' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH' 'niben101scf00120_61436-85414' '(at3g06810 : 1260.0) Encodes a protein with similarity to acyl-CoA dehydrogenases. Mutations in IBR3 render plants resistant to indole-3-butryic acid, a putative storage form of the biologically active auxin IAA (indole-3-acetic acid). IBR3 is hypothesized to carry out the second step in a β-oxidation-like process of IBA metabolism in Arabidopsis. Though its subcellular location has not been determined, IBR3 has a peroxisomal targeting sequence and two other putative IBA metabolic enzymes (IBR1 and IBR10) can be found in this organelle. No specific enzymatic activity has been documented for IBR3, but double mutant analyses with CHY1 argue against a role for IBR3 in general fatty acid β-oxidation.; IBA-RESPONSE 3 (IBR3); FUNCTIONS IN: acyl-CoA dehydrogenase activity, oxidoreductase activity; INVOLVED IN: root hair elongation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075), Protein kinase-like domain (InterPro:IPR011009), Acyl-CoA dehydrogenase, N-terminal (InterPro:IPR006092), Aminoglycoside phosphotransferase (InterPro:IPR002575); BEST Arabidopsis thaliana protein match is: isovaleryl-CoA-dehydrogenase (TAIR:AT3G45300.1); Has 35245 Blast hits to 35197 proteins in 1774 species: Archae - 552; Bacteria - 22616; Metazoa - 1388; Fungi - 871; Plants - 174; Viruses - 0; Other Eukaryotes - 9644 (source: NCBI BLink). & (gnl|cdd|29655 : 616.0) no description available & (gnl|cdd|36682 : 611.0) no description available & (q9fs88|ivd1_soltu : 96.7) Isovaleryl-CoA dehydrogenase 1, mitochondrial precursor (EC 1.3.99.10) (IVD 1) - Solanum tuberosum (Potato) & (reliability: 2520.0) & (original description: Putative IBR3, Description = Probable acyl-CoA dehydrogenase IBR3, PFAM = PF01636;PF02770;PF02771;PF00441)' T '11.9.4.2' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH' 'niben101scf02438_219830-243884' '(at1g06290 : 1085.0) Encodes an acyl-CoA oxidase with specificity for medium chain fatty acids.; acyl-CoA oxidase 3 (ACX3); FUNCTIONS IN: acyl-CoA oxidase activity; INVOLVED IN: medium-chain fatty acid metabolic process, fatty acid beta-oxidation; LOCATED IN: peroxisome; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA oxidase (InterPro:IPR012258), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA oxidase, C-terminal (InterPro:IPR002655), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075); BEST Arabidopsis thaliana protein match is: acyl-CoA oxidase 6 (TAIR:AT1G06310.1); Has 12520 Blast hits to 12510 proteins in 1399 species: Archae - 229; Bacteria - 8347; Metazoa - 1502; Fungi - 589; Plants - 297; Viruses - 0; Other Eukaryotes - 1556 (source: NCBI BLink). & (gnl|cdd|35357 : 818.0) no description available & (gnl|cdd|73248 : 497.0) no description available & (o64894|acox2_cucma : 366.0) Acyl-coenzyme A oxidase, peroxisomal precursor (EC 1.3.3.6) (AOX) (Long-chain acyl-CoA oxidase) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 2170.0) & (original description: Putative ACX3, Description = Acyl-coenzyme A oxidase 3, peroxisomal, PFAM = PF01756;PF02770;PF00441)' T '11.9.4.2' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH' 'niben101scf03085_661271-670421' '(at1g06290 : 1075.0) Encodes an acyl-CoA oxidase with specificity for medium chain fatty acids.; acyl-CoA oxidase 3 (ACX3); FUNCTIONS IN: acyl-CoA oxidase activity; INVOLVED IN: medium-chain fatty acid metabolic process, fatty acid beta-oxidation; LOCATED IN: peroxisome; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA oxidase (InterPro:IPR012258), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA oxidase, C-terminal (InterPro:IPR002655), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075); BEST Arabidopsis thaliana protein match is: acyl-CoA oxidase 6 (TAIR:AT1G06310.1); Has 12520 Blast hits to 12510 proteins in 1399 species: Archae - 229; Bacteria - 8347; Metazoa - 1502; Fungi - 589; Plants - 297; Viruses - 0; Other Eukaryotes - 1556 (source: NCBI BLink). & (gnl|cdd|35357 : 815.0) no description available & (gnl|cdd|73248 : 492.0) no description available & (o64894|acox2_cucma : 356.0) Acyl-coenzyme A oxidase, peroxisomal precursor (EC 1.3.3.6) (AOX) (Long-chain acyl-CoA oxidase) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 2150.0) & (original description: Putative ACX3, Description = Acyl-coenzyme A oxidase 3, peroxisomal, PFAM = PF02770;PF01756;PF00441)' T '11.9.4.2' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH' 'niben101scf03510_291304-298852' '(at5g65110 : 1212.0) Encodes an acyl-CoA oxidase presumably involved in long chain fatty acid biosynthesis.; acyl-CoA oxidase 2 (ACX2); CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA oxidase (InterPro:IPR012258), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA oxidase, C-terminal (InterPro:IPR002655), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075); BEST Arabidopsis thaliana protein match is: acyl-CoA oxidase 3 (TAIR:AT1G06290.1); Has 15850 Blast hits to 15835 proteins in 1495 species: Archae - 314; Bacteria - 10867; Metazoa - 1644; Fungi - 650; Plants - 316; Viruses - 0; Other Eukaryotes - 2059 (source: NCBI BLink). & (o64894|acox2_cucma : 1200.0) Acyl-coenzyme A oxidase, peroxisomal precursor (EC 1.3.3.6) (AOX) (Long-chain acyl-CoA oxidase) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|35357 : 794.0) no description available & (gnl|cdd|73248 : 707.0) no description available & (reliability: 2424.0) & (original description: Putative ACX2, Description = Acyl-coenzyme A oxidase 2, peroxisomal, PFAM = PF01756;PF00441;PF02770)' T '11.9.4.2' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH' 'niben101scf04479_8194-11316' '(at4g16760 : 284.0) Encodes a medium to long-chain acyl-CoA oxidase. Catalyzes the first step of fatty acid beta-oxidation. Involved in jasmonate biosynthesis. Gene expression is induced by wounding, drought stress, abscisic acid, and jasmonate.; acyl-CoA oxidase 1 (ACX1); CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA oxidase (InterPro:IPR012258), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA oxidase, C-terminal (InterPro:IPR002655), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075); BEST Arabidopsis thaliana protein match is: acyl-CoA oxidase 5 (TAIR:AT2G35690.1). & (gnl|cdd|35358 : 235.0) no description available & (gnl|cdd|73248 : 189.0) no description available & (o64894|acox2_cucma : 80.1) Acyl-coenzyme A oxidase, peroxisomal precursor (EC 1.3.3.6) (AOX) (Long-chain acyl-CoA oxidase) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 568.0) & (original description: Putative acox1, Description = Acyl-coenzyme A oxidase, PFAM = PF02770;PF14749)' T '11.9.4.2' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH' 'niben101scf05307_362572-369974' '(at3g51840 : 756.0) Encodes a short-chain acyl-CoA oxidase, which catalyzes the first step of peroxisomal fatty acid beta-oxidation during early, post-germinative growth in oilseed species. Null mutants virtually lack short-chain acyl-CoA and are resistant to 2,4-dichlorophenoxybutyric acid, which is converted to the herbicide and auxin analogue 2,4-dichlorophenoxyacetic acid by beta-oxidation. Despite the almost complete loss of short-chain activity, lipid catabolism and seedling growth and establishment was unaltered in the acx4 mutant. However, double mutants in acx3acx4 (acx3 encodes medium chain acyl CoA oxidase) were not viable and arrested during embryogenesis.; acyl-CoA oxidase 4 (ACX4); FUNCTIONS IN: oxidoreductase activity, acyl-CoA oxidase activity; INVOLVED IN: fatty acid beta-oxidation, short-chain fatty acid metabolic process, embryo development ending in seed dormancy; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA dehydrogenase, conserved site (InterPro:IPR006089), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075), Acyl-CoA dehydrogenase, N-terminal (InterPro:IPR006092); BEST Arabidopsis thaliana protein match is: isovaleryl-CoA-dehydrogenase (TAIR:AT3G45300.1); Has 36828 Blast hits to 36765 proteins in 1995 species: Archae - 537; Bacteria - 24188; Metazoa - 1639; Fungi - 822; Plants - 341; Viruses - 0; Other Eukaryotes - 9301 (source: NCBI BLink). & (gnl|cdd|35360 : 613.0) no description available & (gnl|cdd|29651 : 544.0) no description available & (q9fs88|ivd1_soltu : 160.0) Isovaleryl-CoA dehydrogenase 1, mitochondrial precursor (EC 1.3.99.10) (IVD 1) - Solanum tuberosum (Potato) & (reliability: 1512.0) & (original description: Putative acx4, Description = Acyl-CoA dehydrogenase, C-terminal domain protein, PFAM = PF00441;PF02771;PF02770)' T '11.9.4.2' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH' 'niben101scf06157_43084-53950' '(at4g16760 : 1134.0) Encodes a medium to long-chain acyl-CoA oxidase. Catalyzes the first step of fatty acid beta-oxidation. Involved in jasmonate biosynthesis. Gene expression is induced by wounding, drought stress, abscisic acid, and jasmonate.; acyl-CoA oxidase 1 (ACX1); CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA oxidase (InterPro:IPR012258), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA oxidase, C-terminal (InterPro:IPR002655), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075); BEST Arabidopsis thaliana protein match is: acyl-CoA oxidase 5 (TAIR:AT2G35690.1). & (gnl|cdd|35358 : 865.0) no description available & (gnl|cdd|73248 : 585.0) no description available & (o64894|acox2_cucma : 268.0) Acyl-coenzyme A oxidase, peroxisomal precursor (EC 1.3.3.6) (AOX) (Long-chain acyl-CoA oxidase) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 2268.0) & (original description: Putative Acx1A, Description = Acyl-coenzyme A oxidase, PFAM = PF01756;PF14749;PF02770)' T '11.9.4.2' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH' 'niben101scf06408_342303-349195' '(at3g51840 : 762.0) Encodes a short-chain acyl-CoA oxidase, which catalyzes the first step of peroxisomal fatty acid beta-oxidation during early, post-germinative growth in oilseed species. Null mutants virtually lack short-chain acyl-CoA and are resistant to 2,4-dichlorophenoxybutyric acid, which is converted to the herbicide and auxin analogue 2,4-dichlorophenoxyacetic acid by beta-oxidation. Despite the almost complete loss of short-chain activity, lipid catabolism and seedling growth and establishment was unaltered in the acx4 mutant. However, double mutants in acx3acx4 (acx3 encodes medium chain acyl CoA oxidase) were not viable and arrested during embryogenesis.; acyl-CoA oxidase 4 (ACX4); FUNCTIONS IN: oxidoreductase activity, acyl-CoA oxidase activity; INVOLVED IN: fatty acid beta-oxidation, short-chain fatty acid metabolic process, embryo development ending in seed dormancy; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA dehydrogenase, conserved site (InterPro:IPR006089), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075), Acyl-CoA dehydrogenase, N-terminal (InterPro:IPR006092); BEST Arabidopsis thaliana protein match is: isovaleryl-CoA-dehydrogenase (TAIR:AT3G45300.1); Has 36828 Blast hits to 36765 proteins in 1995 species: Archae - 537; Bacteria - 24188; Metazoa - 1639; Fungi - 822; Plants - 341; Viruses - 0; Other Eukaryotes - 9301 (source: NCBI BLink). & (gnl|cdd|35360 : 618.0) no description available & (gnl|cdd|29651 : 541.0) no description available & (q9fs88|ivd1_soltu : 154.0) Isovaleryl-CoA dehydrogenase 1, mitochondrial precursor (EC 1.3.99.10) (IVD 1) - Solanum tuberosum (Potato) & (reliability: 1524.0) & (original description: Putative ACX4, Description = Acyl-coenzyme A oxidase 4, peroxisomal, PFAM = PF02771;PF00441;PF02770)' T '11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'nbv0.3scaffold14335_17652-23956' '(at4g16800 : 320.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: enoyl-CoA hydratase activity, catalytic activity; INVOLVED IN: fatty acid metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 (TAIR:AT5G43280.1); Has 38027 Blast hits to 38009 proteins in 2336 species: Archae - 484; Bacteria - 24986; Metazoa - 1599; Fungi - 771; Plants - 617; Viruses - 0; Other Eukaryotes - 9570 (source: NCBI BLink). & (gnl|cdd|36892 : 320.0) no description available & (gnl|cdd|82307 : 271.0) no description available & (reliability: 640.0) & (original description: Putative auh, Description = Methylglutaconyl-CoA hydratase, mitochondrial, PFAM = PF00378)' T '11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'nbv0.3scaffold24967_727-10418' '(at3g60510 : 496.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G31810.1). & (gnl|cdd|36897 : 442.0) no description available & (gnl|cdd|75599 : 265.0) no description available & (reliability: 992.0) & (original description: Putative At3g60510, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial, PFAM = PF16113)' T '11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'nbv0.5scaffold392_393993-410921' '(at3g60510 : 488.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G31810.1). & (gnl|cdd|36897 : 429.0) no description available & (gnl|cdd|75599 : 282.0) no description available & (reliability: 976.0) & (original description: Putative At3g60510, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial, PFAM = PF16113)' T '11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'nbv0.5scaffold1324_1-12352' '(at4g13360 : 299.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT3G24360.1); Has 20226 Blast hits to 20218 proteins in 1812 species: Archae - 355; Bacteria - 13945; Metazoa - 843; Fungi - 613; Plants - 486; Viruses - 0; Other Eukaryotes - 3984 (source: NCBI BLink). & (gnl|cdd|36897 : 211.0) no description available & (gnl|cdd|75599 : 118.0) no description available & (reliability: 598.0) & (original description: Putative At3g24360, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial, PFAM = PF16113)' T '11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'nbv0.5scaffold1747_231606-241185' '(at3g60510 : 417.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G31810.1). & (gnl|cdd|36897 : 375.0) no description available & (gnl|cdd|75599 : 214.0) no description available & (reliability: 834.0) & (original description: Putative CHY1, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial, PFAM = PF16113;PF16113;PF16113)' T '11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'nbv0.5scaffold2772_200310-220742' '(at4g13360 : 553.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT3G24360.1); Has 20226 Blast hits to 20218 proteins in 1812 species: Archae - 355; Bacteria - 13945; Metazoa - 843; Fungi - 613; Plants - 486; Viruses - 0; Other Eukaryotes - 3984 (source: NCBI BLink). & (gnl|cdd|36897 : 422.0) no description available & (gnl|cdd|75306 : 245.0) no description available & (reliability: 1106.0) & (original description: Putative At4g13360, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial, PFAM = PF16113)' T '11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'nbv0.5scaffold3845_176346-192566' '(at4g31810 : 571.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: fatty acid beta-oxidation, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT3G60510.1); Has 22679 Blast hits to 22670 proteins in 1880 species: Archae - 357; Bacteria - 15693; Metazoa - 1078; Fungi - 640; Plants - 575; Viruses - 0; Other Eukaryotes - 4336 (source: NCBI BLink). & (gnl|cdd|36897 : 445.0) no description available & (gnl|cdd|75599 : 262.0) no description available & (reliability: 1142.0) & (original description: Putative At4g31810, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial, PFAM = PF16113)' T '11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'niben044scf00030495ctg011_2184-10895' '(at3g24360 : 539.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: fatty acid beta-oxidation, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G13360.1); Has 22029 Blast hits to 22019 proteins in 1814 species: Archae - 358; Bacteria - 15169; Metazoa - 927; Fungi - 600; Plants - 484; Viruses - 0; Other Eukaryotes - 4491 (source: NCBI BLink). & (gnl|cdd|36897 : 408.0) no description available & (gnl|cdd|75306 : 239.0) no description available & (reliability: 1078.0) & (original description: Putative At4g13360, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial, PFAM = PF16113)' T '11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'niben044scf00053207ctg002_668-9359' '(at4g31810 : 374.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: fatty acid beta-oxidation, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT3G60510.1); Has 22679 Blast hits to 22670 proteins in 1880 species: Archae - 357; Bacteria - 15693; Metazoa - 1078; Fungi - 640; Plants - 575; Viruses - 0; Other Eukaryotes - 4336 (source: NCBI BLink). & (gnl|cdd|36897 : 278.0) no description available & (gnl|cdd|76257 : 158.0) no description available & (reliability: 748.0) & (original description: Putative BnaCnng76550D, Description = BnaCnng76550D protein, PFAM = PF16113)' T '11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'niben101scf00878_315242-326183' '(at3g60510 : 484.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G31810.1). & (gnl|cdd|36897 : 430.0) no description available & (gnl|cdd|75599 : 254.0) no description available & (reliability: 968.0) & (original description: Putative At3g60510, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial, PFAM = PF16113;PF16113)' T '11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'niben101scf00917_462841-477723' '(at4g13360 : 583.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT3G24360.1); Has 20226 Blast hits to 20218 proteins in 1812 species: Archae - 355; Bacteria - 13945; Metazoa - 843; Fungi - 613; Plants - 486; Viruses - 0; Other Eukaryotes - 3984 (source: NCBI BLink). & (gnl|cdd|36897 : 432.0) no description available & (gnl|cdd|75306 : 241.0) no description available & (reliability: 1166.0) & (original description: Putative At4g13360, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial, PFAM = PF16113)' T '11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'niben101scf02451_660668-669283' '(at3g24360 : 476.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: fatty acid beta-oxidation, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G13360.1); Has 22029 Blast hits to 22019 proteins in 1814 species: Archae - 358; Bacteria - 15169; Metazoa - 927; Fungi - 600; Plants - 484; Viruses - 0; Other Eukaryotes - 4491 (source: NCBI BLink). & (gnl|cdd|36897 : 355.0) no description available & (gnl|cdd|75306 : 208.0) no description available & (reliability: 952.0) & (original description: Putative At3g24360, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial, PFAM = PF16113;PF16113)' T '11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'niben101scf02568_80434-89389' '(at1g06550 : 534.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: response to karrikin, fatty acid beta-oxidation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: beta-hydroxyisobutyryl-CoA hydrolase 1 (TAIR:AT5G65940.1); Has 26566 Blast hits to 26556 proteins in 2155 species: Archae - 406; Bacteria - 18031; Metazoa - 1157; Fungi - 686; Plants - 463; Viruses - 0; Other Eukaryotes - 5823 (source: NCBI BLink). & (gnl|cdd|36897 : 341.0) no description available & (gnl|cdd|75599 : 254.0) no description available & (reliability: 1068.0) & (original description: Putative hibch, Description = 3-hydroxyisobutyryl-coenzyme A hydrolase, PFAM = PF16113)' T '11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'niben101scf04103_1-12416' '(at3g24360 : 550.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: fatty acid beta-oxidation, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G13360.1); Has 22029 Blast hits to 22019 proteins in 1814 species: Archae - 358; Bacteria - 15169; Metazoa - 927; Fungi - 600; Plants - 484; Viruses - 0; Other Eukaryotes - 4491 (source: NCBI BLink). & (gnl|cdd|36897 : 415.0) no description available & (gnl|cdd|75306 : 250.0) no description available & (reliability: 1100.0) & (original description: Putative At3g24360, Description = Putative 3-hydroxyisobutyryl-CoA hydrolase-like protein 4, mitochondrial-like, PFAM = PF16113)' T '11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'niben101scf05011_153544-170214' '(at4g31810 : 537.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: fatty acid beta-oxidation, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT3G60510.1); Has 22679 Blast hits to 22670 proteins in 1880 species: Archae - 357; Bacteria - 15693; Metazoa - 1078; Fungi - 640; Plants - 575; Viruses - 0; Other Eukaryotes - 4336 (source: NCBI BLink). & (gnl|cdd|36897 : 409.0) no description available & (gnl|cdd|75599 : 232.0) no description available & (reliability: 1074.0) & (original description: Putative At4g31810, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial, PFAM = PF16113)' T '11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'niben101scf05348_10464-13195' '(at1g65520 : 250.0) encodes a peroxisomal delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation; "delta(3), delta(2)-enoyl CoA isomerase 1" (ECI1); FUNCTIONS IN: carnitine racemase activity, catalytic activity, dodecenoyl-CoA delta-isomerase activity; INVOLVED IN: fatty acid catabolic process, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: 3-hydroxyacyl-CoA dehydratase 1 (TAIR:AT4G14440.1); Has 6860 Blast hits to 6860 proteins in 1261 species: Archae - 142; Bacteria - 4521; Metazoa - 587; Fungi - 178; Plants - 198; Viruses - 0; Other Eukaryotes - 1234 (source: NCBI BLink). & (gnl|cdd|31227 : 86.3) no description available & (reliability: 500.0) & (original description: Putative ECI1, Description = Enoyl-CoA delta isomerase 1, peroxisomal, PFAM = PF00378)' T '11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'niben101scf06078_463131-473379' '(at4g16800 : 319.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: enoyl-CoA hydratase activity, catalytic activity; INVOLVED IN: fatty acid metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 (TAIR:AT5G43280.1); Has 38027 Blast hits to 38009 proteins in 2336 species: Archae - 484; Bacteria - 24986; Metazoa - 1599; Fungi - 771; Plants - 617; Viruses - 0; Other Eukaryotes - 9570 (source: NCBI BLink). & (gnl|cdd|36892 : 318.0) no description available & (gnl|cdd|82307 : 269.0) no description available & (reliability: 638.0) & (original description: Putative auh, Description = Methylglutaconyl-CoA hydratase, mitochondrial, PFAM = PF00378)' T '11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'niben101scf11064_11955-14671' '(at4g14430 : 233.0) Encodes a peroxisomal delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation. This enzyme might also be involved in the conversion of indole-3-butyric acid to indole-3-acetic acid via a beta-oxidation-like pathway.; indole-3-butyric acid response 10 (IBR10); FUNCTIONS IN: catalytic activity, dodecenoyl-CoA delta-isomerase activity; INVOLVED IN: fatty acid catabolic process, root hair elongation, metabolic process, indolebutyric acid metabolic process, response to indolebutyric acid stimulus; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: 3-hydroxyacyl-CoA dehydratase 1 (TAIR:AT4G14440.1); Has 14072 Blast hits to 14069 proteins in 1567 species: Archae - 245; Bacteria - 9896; Metazoa - 835; Fungi - 284; Plants - 269; Viruses - 0; Other Eukaryotes - 2543 (source: NCBI BLink). & (gnl|cdd|31227 : 80.1) no description available & (reliability: 466.0) & (original description: Putative ECI3, Description = Enoyl-CoA delta isomerase 3, PFAM = PF00378)' T '11.9.4.4' 'lipid metabolism.lipid degradation.beta-oxidation.hydroxybutyryl CoA DH' 'niben101scf03720_108168-113093' '(at4g16210 : 380.0) enoyl-CoA hydratase/isomerase A (ECHIA); FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: enoyl-CoA hydratase/isomerase D (TAIR:AT1G60550.1); Has 36619 Blast hits to 36609 proteins in 2298 species: Archae - 475; Bacteria - 23840; Metazoa - 1646; Fungi - 934; Plants - 612; Viruses - 0; Other Eukaryotes - 9112 (source: NCBI BLink). & (gnl|cdd|36893 : 241.0) no description available & (gnl|cdd|81879 : 236.0) no description available & (q39659|mfpa_cucsa : 101.0) Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase ( & (reliability: 760.0) & (original description: Putative ECHIA, Description = Probable enoyl-CoA hydratase 1, peroxisomal, PFAM = PF00378)' T '11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'nbv0.3scaffold21277_13385-15349' '(at1g48320 : 206.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683), Phenylacetic acid degradation-related protein (InterPro:IPR003736); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT5G48950.1); Has 2845 Blast hits to 2845 proteins in 1040 species: Archae - 0; Bacteria - 2337; Metazoa - 4; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 376 (source: NCBI BLink). & (gnl|cdd|38538 : 109.0) no description available & (gnl|cdd|48038 : 81.4) no description available & (reliability: 412.0) & (original description: Putative DHNAT1, Description = 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1, PFAM = PF03061)' T '11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'nbv0.5scaffold592_535731-580919' '(at2g29590 : 127.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT1G04290.1); Has 283 Blast hits to 282 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 92; Fungi - 21; Plants - 166; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|38538 : 81.5) no description available & (reliability: 254.0) & (original description: Putative At2g29590, Description = At2g29590, PFAM = PF03061)' T '11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'nbv0.5scaffold3985_102032-162355' '(at1g01710 : 139.0) Acyl-CoA thioesterase family protein; FUNCTIONS IN: cyclic nucleotide binding, acyl-CoA thioesterase activity; INVOLVED IN: acyl-CoA metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), Acyl-CoA thioesterase (InterPro:IPR003703), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Acyl-CoA thioesterase family protein (TAIR:AT4G00520.2); Has 3628 Blast hits to 3595 proteins in 999 species: Archae - 0; Bacteria - 1940; Metazoa - 444; Fungi - 348; Plants - 71; Viruses - 0; Other Eukaryotes - 825 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative CNTE1, Description = Acyl-coenzyme A thioesterase 8, PFAM = PF13622)' T '11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben044scf00001266ctg012_4861-8052' '(at2g29590 : 123.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT1G04290.1); Has 283 Blast hits to 282 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 92; Fungi - 21; Plants - 166; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative At2g29590, Description = At2g29590, PFAM = PF03061)' T '11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben044scf00015817ctg009_15771-20810' '(at2g29590 : 175.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT1G04290.1); Has 283 Blast hits to 282 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 92; Fungi - 21; Plants - 166; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|38538 : 115.0) no description available & (reliability: 350.0) & (original description: Putative At2g29590, Description = At2g29590, PFAM = PF03061)' T '11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben044scf00032678ctg004_2557-5108' '(at1g48320 : 206.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683), Phenylacetic acid degradation-related protein (InterPro:IPR003736); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT5G48950.1); Has 2845 Blast hits to 2845 proteins in 1040 species: Archae - 0; Bacteria - 2337; Metazoa - 4; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 376 (source: NCBI BLink). & (gnl|cdd|38538 : 113.0) no description available & (gnl|cdd|48038 : 81.4) no description available & (reliability: 412.0) & (original description: Putative DHNAT1, Description = 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1, PFAM = PF03061)' T '11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf00120_173187-175654' '(at1g48320 : 172.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683), Phenylacetic acid degradation-related protein (InterPro:IPR003736); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT5G48950.1); Has 2845 Blast hits to 2845 proteins in 1040 species: Archae - 0; Bacteria - 2337; Metazoa - 4; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 376 (source: NCBI BLink). & (gnl|cdd|38538 : 104.0) no description available & (reliability: 344.0) & (original description: Putative DHNAT1, Description = 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1, PFAM = PF03061)' T '11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf01968_87171-101350' '(at1g01710 : 601.0) Acyl-CoA thioesterase family protein; FUNCTIONS IN: cyclic nucleotide binding, acyl-CoA thioesterase activity; INVOLVED IN: acyl-CoA metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), Acyl-CoA thioesterase (InterPro:IPR003703), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Acyl-CoA thioesterase family protein (TAIR:AT4G00520.2); Has 3628 Blast hits to 3595 proteins in 999 species: Archae - 0; Bacteria - 1940; Metazoa - 444; Fungi - 348; Plants - 71; Viruses - 0; Other Eukaryotes - 825 (source: NCBI BLink). & (gnl|cdd|32129 : 287.0) no description available & (gnl|cdd|38226 : 267.0) no description available & (reliability: 1202.0) & (original description: Putative tesB, Description = Acyl-CoA thioesterase 2, PFAM = PF00027;PF13622)' T '11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf01968_89280-145053' '(at1g01710 : 139.0) Acyl-CoA thioesterase family protein; FUNCTIONS IN: cyclic nucleotide binding, acyl-CoA thioesterase activity; INVOLVED IN: acyl-CoA metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), Acyl-CoA thioesterase (InterPro:IPR003703), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Acyl-CoA thioesterase family protein (TAIR:AT4G00520.2); Has 3628 Blast hits to 3595 proteins in 999 species: Archae - 0; Bacteria - 1940; Metazoa - 444; Fungi - 348; Plants - 71; Viruses - 0; Other Eukaryotes - 825 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative CNTE1, Description = Acyl-coenzyme A thioesterase 8, PFAM = PF13622)' T '11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf02408_402906-405853' '(at1g47480 : 298.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 8596 Blast hits to 8578 proteins in 1414 species: Archae - 104; Bacteria - 4918; Metazoa - 486; Fungi - 808; Plants - 1365; Viruses - 3; Other Eukaryotes - 912 (source: NCBI BLink). & (gnl|cdd|36728 : 289.0) no description available & (gnl|cdd|87389 : 148.0) no description available & (q6l545|gid1_orysa : 134.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 584.0) & (original description: Putative HIDM, Description = 2-hydroxyisoflavanone dehydratase, PFAM = PF07859)' T '11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf02408_424427-427757' '(gnl|cdd|36728 : 260.0) no description available & (at3g48690 : 252.0) Encodes a protein with carboxylesterase whose activity was tested using both pNA and 2,4-D-methyl.; CXE12; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: response to salt stress; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 9324 Blast hits to 9298 proteins in 1467 species: Archae - 108; Bacteria - 5259; Metazoa - 789; Fungi - 845; Plants - 1410; Viruses - 3; Other Eukaryotes - 910 (source: NCBI BLink). & (gnl|cdd|87389 : 166.0) no description available & (q6l545|gid1_orysa : 114.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 458.0) & (original description: Putative CXE13, Description = Probable carboxylesterase 13, PFAM = PF07859)' T '11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf02408_482118-485176' '(gnl|cdd|36728 : 260.0) no description available & (at1g19190 : 237.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G03550.1); Has 9471 Blast hits to 9453 proteins in 1548 species: Archae - 114; Bacteria - 5498; Metazoa - 707; Fungi - 823; Plants - 1388; Viruses - 3; Other Eukaryotes - 938 (source: NCBI BLink). & (gnl|cdd|87389 : 165.0) no description available & (q6l545|gid1_orysa : 117.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 468.0) & (original description: Putative CXE1, Description = CXE carboxylesterase, PFAM = PF07859)' T '11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf02408_505135-508082' '(gnl|cdd|36728 : 255.0) no description available & (at1g19190 : 248.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G03550.1); Has 9471 Blast hits to 9453 proteins in 1548 species: Archae - 114; Bacteria - 5498; Metazoa - 707; Fungi - 823; Plants - 1388; Viruses - 3; Other Eukaryotes - 938 (source: NCBI BLink). & (gnl|cdd|87389 : 155.0) no description available & (q6l545|gid1_orysa : 107.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 472.0) & (original description: Putative CXE7, Description = CXE carboxylesterase, PFAM = PF07859)' T '11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf02408_549936-552847' '(at3g48700 : 254.0) carboxyesterase 13 (CXE13); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48690.1); Has 10327 Blast hits to 10297 proteins in 1570 species: Archae - 114; Bacteria - 5663; Metazoa - 1261; Fungi - 886; Plants - 1402; Viruses - 3; Other Eukaryotes - 998 (source: NCBI BLink). & (gnl|cdd|36728 : 247.0) no description available & (gnl|cdd|87389 : 142.0) no description available & (q6l545|gid1_orysa : 90.1) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 478.0) & (original description: Putative CXE1, Description = CXE carboxylesterase, PFAM = PF07859)' T '11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf03016_47943-55285' '(at2g03550 : 238.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 9970 Blast hits to 9948 proteins in 1554 species: Archae - 115; Bacteria - 5525; Metazoa - 1072; Fungi - 910; Plants - 1367; Viruses - 5; Other Eukaryotes - 976 (source: NCBI BLink). & (gnl|cdd|36728 : 224.0) no description available & (gnl|cdd|87389 : 140.0) no description available & (q6l545|gid1_orysa : 87.4) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 476.0) & (original description: Putative ASH1, Description = Acylsugar acylhydrolase 1, PFAM = PF07859)' T '11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf04765_89819-92292' '(at1g48320 : 204.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683), Phenylacetic acid degradation-related protein (InterPro:IPR003736); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT5G48950.1); Has 2845 Blast hits to 2845 proteins in 1040 species: Archae - 0; Bacteria - 2337; Metazoa - 4; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 376 (source: NCBI BLink). & (gnl|cdd|38538 : 108.0) no description available & (reliability: 408.0) & (original description: Putative DHNAT1, Description = 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1, PFAM = PF03061)' T '11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf04956_115034-117975' '(at2g03550 : 292.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 9970 Blast hits to 9948 proteins in 1554 species: Archae - 115; Bacteria - 5525; Metazoa - 1072; Fungi - 910; Plants - 1367; Viruses - 5; Other Eukaryotes - 976 (source: NCBI BLink). & (gnl|cdd|36728 : 287.0) no description available & (gnl|cdd|87389 : 150.0) no description available & (q6l545|gid1_orysa : 126.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 584.0) & (original description: Putative CXE7, Description = Probable carboxylesterase 7, PFAM = PF07859)' T '11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf05830_339831-342793' '(at2g03550 : 225.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 9970 Blast hits to 9948 proteins in 1554 species: Archae - 115; Bacteria - 5525; Metazoa - 1072; Fungi - 910; Plants - 1367; Viruses - 5; Other Eukaryotes - 976 (source: NCBI BLink). & (gnl|cdd|36728 : 221.0) no description available & (gnl|cdd|87389 : 146.0) no description available & (q6l545|gid1_orysa : 89.7) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 450.0) & (original description: Putative HIDM, Description = 2-hydroxyisoflavanone dehydratase, PFAM = PF07859)' T '11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf07616_9648-24608' '(at1g04290 : 192.0) Thioesterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, acyl-CoA thioesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683), Phenylacetic acid degradation-related protein (InterPro:IPR003736); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT2G29590.1); Has 964 Blast hits to 962 proteins in 292 species: Archae - 38; Bacteria - 286; Metazoa - 202; Fungi - 157; Plants - 213; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|38538 : 131.0) no description available & (gnl|cdd|48038 : 81.8) no description available & (reliability: 384.0) & (original description: Putative ACOT13, Description = Acyl-coenzyme A thioesterase-like protein, PFAM = PF03061)' T '11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf08419_154097-156573' '(at1g48320 : 200.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683), Phenylacetic acid degradation-related protein (InterPro:IPR003736); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT5G48950.1); Has 2845 Blast hits to 2845 proteins in 1040 species: Archae - 0; Bacteria - 2337; Metazoa - 4; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 376 (source: NCBI BLink). & (gnl|cdd|38538 : 108.0) no description available & (reliability: 400.0) & (original description: Putative DHNAT1, Description = 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1, PFAM = PF03061)' T '11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf09678_45009-49219' '(at2g29590 : 180.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT1G04290.1); Has 283 Blast hits to 282 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 92; Fungi - 21; Plants - 166; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|38538 : 116.0) no description available & (reliability: 360.0) & (original description: Putative At2g29590, Description = At2g29590, PFAM = PF03061)' T '11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf09678_48234-86799' '(at2g29590 : 123.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT1G04290.1); Has 283 Blast hits to 282 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 92; Fungi - 21; Plants - 166; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|38538 : 81.5) no description available & (reliability: 246.0) & (original description: Putative At2g29590, Description = At2g29590, PFAM = PF03061)' T '11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf09678_70437-88565' '(at2g29590 : 180.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT1G04290.1); Has 283 Blast hits to 282 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 92; Fungi - 21; Plants - 166; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|38538 : 113.0) no description available & (reliability: 360.0) & (original description: Putative At2g29590, Description = At2g29590, PFAM = PF03061)' T '11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf10620_11671-15899' '(at1g04290 : 197.0) Thioesterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, acyl-CoA thioesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683), Phenylacetic acid degradation-related protein (InterPro:IPR003736); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT2G29590.1); Has 964 Blast hits to 962 proteins in 292 species: Archae - 38; Bacteria - 286; Metazoa - 202; Fungi - 157; Plants - 213; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|38538 : 134.0) no description available & (gnl|cdd|48038 : 88.0) no description available & (reliability: 394.0) & (original description: Putative Sb06g017150, Description = Putative uncharacterized protein Sb06g017150, PFAM = PF03061)' T '11.9.4.5' 'lipid metabolism.lipid degradation.beta-oxidation.acyl-CoA thioesterase' 'niben101scf17244_25240-27707' '(at1g48320 : 183.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683), Phenylacetic acid degradation-related protein (InterPro:IPR003736); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT5G48950.1); Has 2845 Blast hits to 2845 proteins in 1040 species: Archae - 0; Bacteria - 2337; Metazoa - 4; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 376 (source: NCBI BLink). & (gnl|cdd|38538 : 105.0) no description available & (reliability: 366.0) & (original description: Putative DHNAT2, Description = 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 2, PFAM = PF03061)' T '11.9.4.9' 'lipid metabolism.lipid degradation.beta-oxidation.multifunctional' 'nbv0.5scaffold249_85568-90143' '(q8w1l6|mfp_orysa : 336.0) Peroxisomal fatty acid beta-oxidation multifunctional protein (MFP) [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase (E & (at4g29010 : 328.0) Functions in beta-oxidation of fatty acids, similar to CuMFP with L-3-hydroxyacyl-CoA hydrolyase , L-3-hydroxyacyl-dehydrogenase, D-3-hydroxyacyl-CoA epimerase, and 3, 2-enoyl-CoA isomerase activities; ABNORMAL INFLORESCENCE MERISTEM (AIM1); FUNCTIONS IN: enoyl-CoA hydratase activity; INVOLVED IN: multicellular organismal development, flower development, fatty acid beta-oxidation, seed germination; LOCATED IN: cell wall, peroxisome, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), Crotonase, core (InterPro:IPR001753), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108); BEST Arabidopsis thaliana protein match is: multifunctional protein 2 (TAIR:AT3G06860.1); Has 47636 Blast hits to 46241 proteins in 2477 species: Archae - 813; Bacteria - 30277; Metazoa - 2018; Fungi - 1063; Plants - 649; Viruses - 0; Other Eukaryotes - 12816 (source: NCBI BLink). & (gnl|cdd|83754 : 181.0) no description available & (gnl|cdd|36893 : 123.0) no description available & (reliability: 656.0) & (original description: Putative AIM1, Description = Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a, PFAM = PF02737;PF00378)' T '11.9.4.9' 'lipid metabolism.lipid degradation.beta-oxidation.multifunctional' 'nbv0.5scaffold1519_387075-396626' '(q39659|mfpa_cucsa : 1105.0) Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase ( & (at3g06860 : 1080.0) Encodes a multifunctional protein. Involved in peroxisomal fatty acid beta oxidation. Loss-of-function mutant lacks hydroxyacyl-CoA dehydrogenase activity and have reduced levels of long-chain enoyl-CoA hydratase activity. The mutant has fewer but larger peroxisomes.; multifunctional protein 2 (MFP2); FUNCTIONS IN: enoyl-CoA hydratase activity, 3-hydroxyacyl-CoA dehydrogenase activity; INVOLVED IN: fatty acid beta-oxidation; LOCATED IN: nucleolus, cell wall, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), Crotonase, core (InterPro:IPR001753), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108); BEST Arabidopsis thaliana protein match is: Enoyl-CoA hydratase/isomerase family (TAIR:AT4G29010.1); Has 46309 Blast hits to 45272 proteins in 2450 species: Archae - 810; Bacteria - 29664; Metazoa - 2011; Fungi - 1039; Plants - 666; Viruses - 0; Other Eukaryotes - 12119 (source: NCBI BLink). & (gnl|cdd|83754 : 461.0) no description available & (gnl|cdd|36896 : 373.0) no description available & (reliability: 2160.0) & (original description: Putative AIM1, Description = Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a, PFAM = PF00378;PF00725;PF02737)' T '11.9.4.9' 'lipid metabolism.lipid degradation.beta-oxidation.multifunctional' 'nbv0.5scaffold1519_387096-392818' '(q39659|mfpa_cucsa : 129.0) Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase ( & (at3g06860 : 116.0) Encodes a multifunctional protein. Involved in peroxisomal fatty acid beta oxidation. Loss-of-function mutant lacks hydroxyacyl-CoA dehydrogenase activity and have reduced levels of long-chain enoyl-CoA hydratase activity. The mutant has fewer but larger peroxisomes.; multifunctional protein 2 (MFP2); FUNCTIONS IN: enoyl-CoA hydratase activity, 3-hydroxyacyl-CoA dehydrogenase activity; INVOLVED IN: fatty acid beta-oxidation; LOCATED IN: nucleolus, cell wall, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), Crotonase, core (InterPro:IPR001753), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108); BEST Arabidopsis thaliana protein match is: Enoyl-CoA hydratase/isomerase family (TAIR:AT4G29010.1); Has 46309 Blast hits to 45272 proteins in 2450 species: Archae - 810; Bacteria - 29664; Metazoa - 2011; Fungi - 1039; Plants - 666; Viruses - 0; Other Eukaryotes - 12119 (source: NCBI BLink). & (gnl|cdd|82308 : 111.0) no description available & (reliability: 232.0) & (original description: Putative crt, Description = Enoyl-CoA hydratase, PFAM = PF00378)' T '11.9.4.9' 'lipid metabolism.lipid degradation.beta-oxidation.multifunctional' 'niben044scf00017976ctg002_1-7950' '(q39659|mfpa_cucsa : 1069.0) Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase ( & (at3g06860 : 1048.0) Encodes a multifunctional protein. Involved in peroxisomal fatty acid beta oxidation. Loss-of-function mutant lacks hydroxyacyl-CoA dehydrogenase activity and have reduced levels of long-chain enoyl-CoA hydratase activity. The mutant has fewer but larger peroxisomes.; multifunctional protein 2 (MFP2); FUNCTIONS IN: enoyl-CoA hydratase activity, 3-hydroxyacyl-CoA dehydrogenase activity; INVOLVED IN: fatty acid beta-oxidation; LOCATED IN: nucleolus, cell wall, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), Crotonase, core (InterPro:IPR001753), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108); BEST Arabidopsis thaliana protein match is: Enoyl-CoA hydratase/isomerase family (TAIR:AT4G29010.1); Has 46309 Blast hits to 45272 proteins in 2450 species: Archae - 810; Bacteria - 29664; Metazoa - 2011; Fungi - 1039; Plants - 666; Viruses - 0; Other Eukaryotes - 12119 (source: NCBI BLink). & (gnl|cdd|83754 : 463.0) no description available & (gnl|cdd|36896 : 369.0) no description available & (reliability: 2096.0) & (original description: Putative AIM1, Description = Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a, PFAM = PF00378;PF02737;PF00725)' T '11.9.4.9' 'lipid metabolism.lipid degradation.beta-oxidation.multifunctional' 'niben101scf00605_175390-186677' '(at4g29010 : 1001.0) Functions in beta-oxidation of fatty acids, similar to CuMFP with L-3-hydroxyacyl-CoA hydrolyase , L-3-hydroxyacyl-dehydrogenase, D-3-hydroxyacyl-CoA epimerase, and 3, 2-enoyl-CoA isomerase activities; ABNORMAL INFLORESCENCE MERISTEM (AIM1); FUNCTIONS IN: enoyl-CoA hydratase activity; INVOLVED IN: multicellular organismal development, flower development, fatty acid beta-oxidation, seed germination; LOCATED IN: cell wall, peroxisome, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), Crotonase, core (InterPro:IPR001753), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108); BEST Arabidopsis thaliana protein match is: multifunctional protein 2 (TAIR:AT3G06860.1); Has 47636 Blast hits to 46241 proteins in 2477 species: Archae - 813; Bacteria - 30277; Metazoa - 2018; Fungi - 1063; Plants - 649; Viruses - 0; Other Eukaryotes - 12816 (source: NCBI BLink). & (q8w1l6|mfp_orysa : 943.0) Peroxisomal fatty acid beta-oxidation multifunctional protein (MFP) [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase (E & (gnl|cdd|83754 : 481.0) no description available & (gnl|cdd|36896 : 386.0) no description available & (reliability: 2002.0) & (original description: Putative AIM1, Description = Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1, PFAM = PF00378;PF00725;PF02737)' T '11.9.4.9' 'lipid metabolism.lipid degradation.beta-oxidation.multifunctional' 'niben101scf02354_1462311-1468569' '(q8w1l6|mfp_orysa : 290.0) Peroxisomal fatty acid beta-oxidation multifunctional protein (MFP) [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase (E & (at4g29010 : 286.0) Functions in beta-oxidation of fatty acids, similar to CuMFP with L-3-hydroxyacyl-CoA hydrolyase , L-3-hydroxyacyl-dehydrogenase, D-3-hydroxyacyl-CoA epimerase, and 3, 2-enoyl-CoA isomerase activities; ABNORMAL INFLORESCENCE MERISTEM (AIM1); FUNCTIONS IN: enoyl-CoA hydratase activity; INVOLVED IN: multicellular organismal development, flower development, fatty acid beta-oxidation, seed germination; LOCATED IN: cell wall, peroxisome, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), Crotonase, core (InterPro:IPR001753), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108); BEST Arabidopsis thaliana protein match is: multifunctional protein 2 (TAIR:AT3G06860.1); Has 47636 Blast hits to 46241 proteins in 2477 species: Archae - 813; Bacteria - 30277; Metazoa - 2018; Fungi - 1063; Plants - 649; Viruses - 0; Other Eukaryotes - 12816 (source: NCBI BLink). & (gnl|cdd|83754 : 175.0) no description available & (gnl|cdd|36893 : 115.0) no description available & (reliability: 572.0) & (original description: Putative AIM1, Description = Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a, PFAM = PF00378;PF02737;PF02737)' T '11.9.4.9' 'lipid metabolism.lipid degradation.beta-oxidation.multifunctional' 'niben101scf06506_64447-74713' '(q8w1l6|mfp_orysa : 821.0) Peroxisomal fatty acid beta-oxidation multifunctional protein (MFP) [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase (E & (at4g29010 : 817.0) Functions in beta-oxidation of fatty acids, similar to CuMFP with L-3-hydroxyacyl-CoA hydrolyase , L-3-hydroxyacyl-dehydrogenase, D-3-hydroxyacyl-CoA epimerase, and 3, 2-enoyl-CoA isomerase activities; ABNORMAL INFLORESCENCE MERISTEM (AIM1); FUNCTIONS IN: enoyl-CoA hydratase activity; INVOLVED IN: multicellular organismal development, flower development, fatty acid beta-oxidation, seed germination; LOCATED IN: cell wall, peroxisome, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), Crotonase, core (InterPro:IPR001753), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108); BEST Arabidopsis thaliana protein match is: multifunctional protein 2 (TAIR:AT3G06860.1); Has 47636 Blast hits to 46241 proteins in 2477 species: Archae - 813; Bacteria - 30277; Metazoa - 2018; Fungi - 1063; Plants - 649; Viruses - 0; Other Eukaryotes - 12816 (source: NCBI BLink). & (gnl|cdd|83754 : 446.0) no description available & (gnl|cdd|36896 : 353.0) no description available & (reliability: 1634.0) & (original description: Putative AIM1, Description = Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1, PFAM = PF02737;PF00725;PF00725;PF00378)' T '11.9.4.9' 'lipid metabolism.lipid degradation.beta-oxidation.multifunctional' 'niben101scf13098_96658-108046' '(at4g29010 : 1008.0) Functions in beta-oxidation of fatty acids, similar to CuMFP with L-3-hydroxyacyl-CoA hydrolyase , L-3-hydroxyacyl-dehydrogenase, D-3-hydroxyacyl-CoA epimerase, and 3, 2-enoyl-CoA isomerase activities; ABNORMAL INFLORESCENCE MERISTEM (AIM1); FUNCTIONS IN: enoyl-CoA hydratase activity; INVOLVED IN: multicellular organismal development, flower development, fatty acid beta-oxidation, seed germination; LOCATED IN: cell wall, peroxisome, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), Crotonase, core (InterPro:IPR001753), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108); BEST Arabidopsis thaliana protein match is: multifunctional protein 2 (TAIR:AT3G06860.1); Has 47636 Blast hits to 46241 proteins in 2477 species: Archae - 813; Bacteria - 30277; Metazoa - 2018; Fungi - 1063; Plants - 649; Viruses - 0; Other Eukaryotes - 12816 (source: NCBI BLink). & (q8w1l6|mfp_orysa : 935.0) Peroxisomal fatty acid beta-oxidation multifunctional protein (MFP) [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase (E & (gnl|cdd|83754 : 492.0) no description available & (gnl|cdd|36896 : 400.0) no description available & (reliability: 2016.0) & (original description: Putative AIM1, Description = Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1, PFAM = PF02737;PF00378;PF00725)' T '11.9.4.9' 'lipid metabolism.lipid degradation.beta-oxidation.multifunctional' 'niben101scf15965_52257-61836' '(q39659|mfpa_cucsa : 1102.0) Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase ( & (at3g06860 : 1074.0) Encodes a multifunctional protein. Involved in peroxisomal fatty acid beta oxidation. Loss-of-function mutant lacks hydroxyacyl-CoA dehydrogenase activity and have reduced levels of long-chain enoyl-CoA hydratase activity. The mutant has fewer but larger peroxisomes.; multifunctional protein 2 (MFP2); FUNCTIONS IN: enoyl-CoA hydratase activity, 3-hydroxyacyl-CoA dehydrogenase activity; INVOLVED IN: fatty acid beta-oxidation; LOCATED IN: nucleolus, cell wall, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), Crotonase, core (InterPro:IPR001753), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108); BEST Arabidopsis thaliana protein match is: Enoyl-CoA hydratase/isomerase family (TAIR:AT4G29010.1); Has 46309 Blast hits to 45272 proteins in 2450 species: Archae - 810; Bacteria - 29664; Metazoa - 2011; Fungi - 1039; Plants - 666; Viruses - 0; Other Eukaryotes - 12119 (source: NCBI BLink). & (gnl|cdd|83754 : 453.0) no description available & (gnl|cdd|36896 : 368.0) no description available & (reliability: 2148.0) & (original description: Putative AIM1, Description = Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a, PFAM = PF00378;PF02737;PF00725)' T '11.9.4.13' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA reductase' 'nbv0.5scaffold2136_28447-32400' '(at4g33790 : 414.0) Encodes an alcohol-forming fatty acyl-CoA reductase, involved in cuticular wax biosynthesis. Lines carrying recessive mutations are deficient in primary alcohol and have glossy stem surfaces.; ECERIFERUM 4 (CER4); FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, fatty-acyl-CoA reductase (alcohol-forming) activity; INVOLVED IN: microsporogenesis, wax biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Male sterility (InterPro:IPR004262), NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 1 (TAIR:AT5G22500.1); Has 2106 Blast hits to 2074 proteins in 384 species: Archae - 24; Bacteria - 471; Metazoa - 997; Fungi - 134; Plants - 291; Viruses - 0; Other Eukaryotes - 189 (source: NCBI BLink). & (gnl|cdd|36435 : 356.0) no description available & (gnl|cdd|87425 : 232.0) no description available & (reliability: 828.0) & (original description: Putative ms2, Description = Gland-specific fatty acyl-CoA reductase, PFAM = PF07993)' T '11.9.4.13' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA reductase' 'nbv0.5scaffold6398_98955-105406' '(at4g33790 : 611.0) Encodes an alcohol-forming fatty acyl-CoA reductase, involved in cuticular wax biosynthesis. Lines carrying recessive mutations are deficient in primary alcohol and have glossy stem surfaces.; ECERIFERUM 4 (CER4); FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, fatty-acyl-CoA reductase (alcohol-forming) activity; INVOLVED IN: microsporogenesis, wax biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Male sterility (InterPro:IPR004262), NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 1 (TAIR:AT5G22500.1); Has 2106 Blast hits to 2074 proteins in 384 species: Archae - 24; Bacteria - 471; Metazoa - 997; Fungi - 134; Plants - 291; Viruses - 0; Other Eukaryotes - 189 (source: NCBI BLink). & (gnl|cdd|36435 : 458.0) no description available & (gnl|cdd|87425 : 240.0) no description available & (reliability: 1222.0) & (original description: Putative FAR3, Description = Fatty acyl-CoA reductase 3, PFAM = PF03015;PF07993)' T '11.9.4.13' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA reductase' 'niben044scf00010712ctg001_12949-15560' '(at3g44540 : 216.0) Encodes a member of the eight-member gene family encoding alcohol-forming fatty acyl-CoA reductases (FARs) identified in Arabidopsis thaliana. Three of the FARs, FAR1 (At5g22500), FAR4 (At3g44540) and FAR5 (At3g44550), are shown to generate the fatty alcohols found in root, seed coat, and wound-induced leaf tissue.; fatty acid reductase 4 (FAR4); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 1 (TAIR:AT5G22500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36435 : 192.0) no description available & (gnl|cdd|87425 : 86.8) no description available & (reliability: 432.0) & (original description: Putative CER4, Description = Fatty acyl-CoA reductase, PFAM = PF07993;PF03015)' T '11.9.4.13' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA reductase' 'niben044scf00029995ctg009_1369-5755' '(at4g33790 : 437.0) Encodes an alcohol-forming fatty acyl-CoA reductase, involved in cuticular wax biosynthesis. Lines carrying recessive mutations are deficient in primary alcohol and have glossy stem surfaces.; ECERIFERUM 4 (CER4); FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, fatty-acyl-CoA reductase (alcohol-forming) activity; INVOLVED IN: microsporogenesis, wax biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Male sterility (InterPro:IPR004262), NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 1 (TAIR:AT5G22500.1); Has 2106 Blast hits to 2074 proteins in 384 species: Archae - 24; Bacteria - 471; Metazoa - 997; Fungi - 134; Plants - 291; Viruses - 0; Other Eukaryotes - 189 (source: NCBI BLink). & (gnl|cdd|36435 : 338.0) no description available & (gnl|cdd|87425 : 213.0) no description available & (reliability: 874.0) & (original description: Putative FAR3, Description = Fatty acyl-CoA reductase 3, PFAM = PF07993;PF03015)' T '11.9.4.13' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA reductase' 'niben101scf01110_178823-183996' '(at3g44550 : 348.0) Encodes a member of the eight-member gene family encoding alcohol-forming fatty acyl-CoA reductases (FARs) identified in Arabidopsis thaliana. Three of the FARs, FAR1 (At5g22500), FAR4 (At3g44540) and FAR5 (At3g44550), are shown to generate the fatty alcohols found in root, seed coat, and wound-induced leaf tissue.; fatty acid reductase 5 (FAR5); CONTAINS InterPro DOMAIN/s: Male sterility (InterPro:IPR004262), NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 8 (TAIR:AT3G44560.1); Has 2710 Blast hits to 2672 proteins in 523 species: Archae - 2; Bacteria - 816; Metazoa - 1013; Fungi - 330; Plants - 287; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (gnl|cdd|36435 : 287.0) no description available & (gnl|cdd|87425 : 203.0) no description available & (reliability: 696.0) & (original description: Putative msh1, Description = Gland-specific fatty acyl-CoA reductase, PFAM = PF07993)' T '11.9.4.13' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA reductase' 'niben101scf03113_92128-98826' '(at4g33790 : 635.0) Encodes an alcohol-forming fatty acyl-CoA reductase, involved in cuticular wax biosynthesis. Lines carrying recessive mutations are deficient in primary alcohol and have glossy stem surfaces.; ECERIFERUM 4 (CER4); FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, fatty-acyl-CoA reductase (alcohol-forming) activity; INVOLVED IN: microsporogenesis, wax biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Male sterility (InterPro:IPR004262), NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 1 (TAIR:AT5G22500.1); Has 2106 Blast hits to 2074 proteins in 384 species: Archae - 24; Bacteria - 471; Metazoa - 997; Fungi - 134; Plants - 291; Viruses - 0; Other Eukaryotes - 189 (source: NCBI BLink). & (gnl|cdd|36435 : 466.0) no description available & (gnl|cdd|87425 : 240.0) no description available & (reliability: 1270.0) & (original description: Putative FAR3, Description = Fatty acyl-CoA reductase 3, PFAM = PF03015;PF07993)' T '11.9.4.13' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA reductase' 'niben101scf05079_30383-39966' '(at3g44540 : 115.0) Encodes a member of the eight-member gene family encoding alcohol-forming fatty acyl-CoA reductases (FARs) identified in Arabidopsis thaliana. Three of the FARs, FAR1 (At5g22500), FAR4 (At3g44540) and FAR5 (At3g44550), are shown to generate the fatty alcohols found in root, seed coat, and wound-induced leaf tissue.; fatty acid reductase 4 (FAR4); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 1 (TAIR:AT5G22500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36435 : 113.0) no description available & (gnl|cdd|87425 : 89.2) no description available & (reliability: 230.0) & (original description: Putative FAR, Description = Fatty acyl-coenzyme A reductase, PFAM = PF07993)' T '11.9.4.13' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA reductase' 'niben101scf05732_414706-419603' '(at4g33790 : 494.0) Encodes an alcohol-forming fatty acyl-CoA reductase, involved in cuticular wax biosynthesis. Lines carrying recessive mutations are deficient in primary alcohol and have glossy stem surfaces.; ECERIFERUM 4 (CER4); FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, fatty-acyl-CoA reductase (alcohol-forming) activity; INVOLVED IN: microsporogenesis, wax biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Male sterility (InterPro:IPR004262), NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 1 (TAIR:AT5G22500.1); Has 2106 Blast hits to 2074 proteins in 384 species: Archae - 24; Bacteria - 471; Metazoa - 997; Fungi - 134; Plants - 291; Viruses - 0; Other Eukaryotes - 189 (source: NCBI BLink). & (gnl|cdd|36435 : 408.0) no description available & (gnl|cdd|87425 : 232.0) no description available & (reliability: 988.0) & (original description: Putative msh1, Description = Gland-specific fatty acyl-CoA reductase, PFAM = PF03015;PF07993)' T '11.9.4.13' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA reductase' 'niben101scf05732_417085-418902' '(at5g22500 : 139.0) Encodes a member of the eight-member gene family encoding alcohol-forming fatty acyl-CoA reductases (FARs) identified in Arabidopsis thaliana. Three of the FARs, FAR1 (At5g22500), FAR4 (At3g44540) and FAR5 (At3g44550), are shown to generate the fatty alcohols found in root, seed coat, and wound-induced leaf tissue.; fatty acid reductase 1 (FAR1); FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, fatty-acyl-CoA reductase (alcohol-forming) activity, long-chain-fatty-acyl-CoA reductase activity; INVOLVED IN: response to salt stress, microsporogenesis, response to wounding, suberin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Male sterility (InterPro:IPR004262), NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 4 (TAIR:AT3G44540.1); Has 2592 Blast hits to 2555 proteins in 497 species: Archae - 6; Bacteria - 759; Metazoa - 1002; Fungi - 307; Plants - 285; Viruses - 0; Other Eukaryotes - 233 (source: NCBI BLink). & (gnl|cdd|36435 : 118.0) no description available & (reliability: 278.0) & (original description: Putative PGSC0003DMG400023759, Description = Fatty acid reductase 4, PFAM = PF03015)' T '11.9.4.13' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA reductase' 'niben101scf08643_75961-86006' '(at4g33790 : 590.0) Encodes an alcohol-forming fatty acyl-CoA reductase, involved in cuticular wax biosynthesis. Lines carrying recessive mutations are deficient in primary alcohol and have glossy stem surfaces.; ECERIFERUM 4 (CER4); FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, fatty-acyl-CoA reductase (alcohol-forming) activity; INVOLVED IN: microsporogenesis, wax biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Male sterility (InterPro:IPR004262), NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 1 (TAIR:AT5G22500.1); Has 2106 Blast hits to 2074 proteins in 384 species: Archae - 24; Bacteria - 471; Metazoa - 997; Fungi - 134; Plants - 291; Viruses - 0; Other Eukaryotes - 189 (source: NCBI BLink). & (gnl|cdd|36435 : 467.0) no description available & (gnl|cdd|87425 : 238.0) no description available & (reliability: 1180.0) & (original description: Putative ms2, Description = Fatty acyl-CoA reductase, PFAM = PF07993;PF03015)' T '11.9.4.14' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl isomerase' 'niben101scf02996_614932-621030' '(at5g43280 : 377.0) Encodes the peroxisomal delta 3,5-delta2,4-dienoyl-CoA isomerase, a enzyme involved in degradation of unsaturated fatty acids. Gene expression is induced upon seed germination.; "delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1" (DCI1); FUNCTIONS IN: enoyl-CoA hydratase activity, delta3,5-delta2,4-dienoyl-CoA isomerase activity; INVOLVED IN: fatty acid catabolic process, seed germination, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G16800.1); Has 36679 Blast hits to 36669 proteins in 2260 species: Archae - 469; Bacteria - 24045; Metazoa - 1683; Fungi - 913; Plants - 624; Viruses - 0; Other Eukaryotes - 8945 (source: NCBI BLink). & (gnl|cdd|36894 : 344.0) no description available & (gnl|cdd|75387 : 300.0) no description available & (reliability: 754.0) & (original description: Putative DCI1, Description = Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal, PFAM = PF00378)' T '11.9.4.14' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl isomerase' 'niben101scf02996_619708-622555' '(at5g43280 : 288.0) Encodes the peroxisomal delta 3,5-delta2,4-dienoyl-CoA isomerase, a enzyme involved in degradation of unsaturated fatty acids. Gene expression is induced upon seed germination.; "delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1" (DCI1); FUNCTIONS IN: enoyl-CoA hydratase activity, delta3,5-delta2,4-dienoyl-CoA isomerase activity; INVOLVED IN: fatty acid catabolic process, seed germination, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G16800.1); Has 36679 Blast hits to 36669 proteins in 2260 species: Archae - 469; Bacteria - 24045; Metazoa - 1683; Fungi - 913; Plants - 624; Viruses - 0; Other Eukaryotes - 8945 (source: NCBI BLink). & (gnl|cdd|36894 : 270.0) no description available & (gnl|cdd|75387 : 223.0) no description available & (reliability: 576.0) & (original description: Putative caiD, Description = Enoyl-CoA hydratase, PFAM = PF00378)' T '11.9.4.99' 'lipid metabolism.lipid degradation.beta-oxidation.misc' '' '' '11.10' 'lipid metabolism.glycolipid synthesis' '' '' '11.10.1' 'lipid metabolism.glycolipid synthesis.MGDG synthase' 'nbv0.3scaffold5344_46775-55668' '(at4g31780 : 741.0) Encodes an A-type monogalactosyldiacylglycerol (MGDG) synthase. It represents the isoform responsible for the bulk of MGDG synthesis in Arabidopsis.; monogalactosyl diacylglycerol synthase 1 (MGD1); FUNCTIONS IN: UDP-glycosyltransferase activity, 1,2-diacylglycerol 3-beta-galactosyltransferase activity, transferase activity, transferring glycosyl groups, UDP-galactosyltransferase activity; INVOLVED IN: thylakoid membrane organization, glycolipid biosynthetic process, galactolipid biosynthetic process, embryo development; LOCATED IN: chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28, C-terminal (InterPro:IPR007235), Monogalactosyldiacylglycerol synthase (InterPro:IPR009695); BEST Arabidopsis thaliana protein match is: monogalactosyldiacylglycerol synthase type C (TAIR:AT2G11810.1); Has 2406 Blast hits to 2406 proteins in 811 species: Archae - 0; Bacteria - 2169; Metazoa - 0; Fungi - 0; Plants - 110; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|70396 : 224.0) no description available & (reliability: 1482.0) & (original description: Putative MGD A, Description = Probable monogalactosyldiacylglycerol synthase, chloroplastic, PFAM = PF06925;PF04101)' T '11.10.1' 'lipid metabolism.glycolipid synthesis.MGDG synthase' 'niben101scf00412_134319-149207' '(at4g31780 : 739.0) Encodes an A-type monogalactosyldiacylglycerol (MGDG) synthase. It represents the isoform responsible for the bulk of MGDG synthesis in Arabidopsis.; monogalactosyl diacylglycerol synthase 1 (MGD1); FUNCTIONS IN: UDP-glycosyltransferase activity, 1,2-diacylglycerol 3-beta-galactosyltransferase activity, transferase activity, transferring glycosyl groups, UDP-galactosyltransferase activity; INVOLVED IN: thylakoid membrane organization, glycolipid biosynthetic process, galactolipid biosynthetic process, embryo development; LOCATED IN: chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28, C-terminal (InterPro:IPR007235), Monogalactosyldiacylglycerol synthase (InterPro:IPR009695); BEST Arabidopsis thaliana protein match is: monogalactosyldiacylglycerol synthase type C (TAIR:AT2G11810.1); Has 2406 Blast hits to 2406 proteins in 811 species: Archae - 0; Bacteria - 2169; Metazoa - 0; Fungi - 0; Plants - 110; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|70396 : 224.0) no description available & (reliability: 1478.0) & (original description: Putative MGD A, Description = Probable monogalactosyldiacylglycerol synthase, chloroplastic, PFAM = PF06925;PF04101)' T '11.10.1' 'lipid metabolism.glycolipid synthesis.MGDG synthase' 'niben101scf04918_345635-350443' '(at5g20410 : 668.0) Encodes a type B monogalactosyldiacylglycerol (MGDG) synthase. Strongly induced by phosphate deprivation, and in non-photosynthetic tissues. Does not contribute to galactolipid synthesis under Pi-sufficient conditions but does under Pi starvation.; monogalactosyldiacylglycerol synthase 2 (MGD2); CONTAINS InterPro DOMAIN/s: Monogalactosyldiacylglycerol synthase (InterPro:IPR009695), Glycosyl transferase, family 28, C-terminal (InterPro:IPR007235); BEST Arabidopsis thaliana protein match is: monogalactosyldiacylglycerol synthase type C (TAIR:AT2G11810.1); Has 1572 Blast hits to 1572 proteins in 585 species: Archae - 0; Bacteria - 1385; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (gnl|cdd|70396 : 213.0) no description available & (reliability: 1336.0) & (original description: Putative MGD2, Description = Monogalactosyldiacylglycerol synthase 2, chloroplastic, PFAM = PF06925;PF04101)' T '11.10.1' 'lipid metabolism.glycolipid synthesis.MGDG synthase' 'niben101scf05220_167313-174852' '(at2g11810 : 665.0) MGD3 is the major enzyme for galactolipid metabolism during phosphate starvation. Does not contribute to galactolipid synthesis under P1-sufficient conditions.; monogalactosyldiacylglycerol synthase type C (MGDC); CONTAINS InterPro DOMAIN/s: Monogalactosyldiacylglycerol synthase (InterPro:IPR009695); BEST Arabidopsis thaliana protein match is: monogalactosyldiacylglycerol synthase 2 (TAIR:AT5G20410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|70396 : 215.0) no description available & (reliability: 1330.0) & (original description: Putative MGD3, Description = Monogalactosyldiacylglycerol synthase 3, chloroplastic, PFAM = PF06925;PF04101)' T '11.10.1' 'lipid metabolism.glycolipid synthesis.MGDG synthase' 'niben101scf11154_1531-6724' '(at5g20410 : 677.0) Encodes a type B monogalactosyldiacylglycerol (MGDG) synthase. Strongly induced by phosphate deprivation, and in non-photosynthetic tissues. Does not contribute to galactolipid synthesis under Pi-sufficient conditions but does under Pi starvation.; monogalactosyldiacylglycerol synthase 2 (MGD2); CONTAINS InterPro DOMAIN/s: Monogalactosyldiacylglycerol synthase (InterPro:IPR009695), Glycosyl transferase, family 28, C-terminal (InterPro:IPR007235); BEST Arabidopsis thaliana protein match is: monogalactosyldiacylglycerol synthase type C (TAIR:AT2G11810.1); Has 1572 Blast hits to 1572 proteins in 585 species: Archae - 0; Bacteria - 1385; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (gnl|cdd|70396 : 220.0) no description available & (reliability: 1354.0) & (original description: Putative MGD2, Description = Monogalactosyldiacylglycerol synthase 2, chloroplastic, PFAM = PF04101;PF06925)' T '11.10.2' 'lipid metabolism.glycolipid synthesis.DGDG synthase' 'nbv0.3scaffold72271_258-7356' '(q6dw73|dgdg2_lotja : 643.0) Digalactosyldiacylglycerol synthase 2, chloroplast (EC 2.4.1.241) - Lotus japonicus & (at4g00550 : 625.0) encodes a UDP-galactose-dependent digalactosyldiacylglycerol(DGDG) synthase. Located in chloroplast outer membrane.; digalactosyl diacylglycerol deficient 2 (DGD2); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G11670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1250.0) & (original description: Putative DGD2, Description = Digalactosyldiacylglycerol synthase 2, chloroplastic, PFAM = PF13692)' T '11.10.2' 'lipid metabolism.glycolipid synthesis.DGDG synthase' 'nbv0.5scaffold809_514486-521907' '(q6dw74|dgdg1_lotja : 1090.0) Digalactosyldiacylglycerol synthase 1, chloroplast precursor (EC 2.4.1.241) - Lotus japonicus & (at3g11670 : 1031.0) Responsible for the final assembly of galactolipids in photosynthetic membranes. Provides stability to the PS I core complex (e.g. subunits PsaD, PsaE).; DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1 (DGD1); BEST Arabidopsis thaliana protein match is: digalactosyl diacylglycerol deficient 2 (TAIR:AT4G00550.1); Has 183 Blast hits to 183 proteins in 35 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 152; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 2062.0) & (original description: Putative DGD1, Description = Digalactosyldiacylglycerol synthase 1, chloroplastic, PFAM = PF13692)' T '11.10.2' 'lipid metabolism.glycolipid synthesis.DGDG synthase' 'nbv0.5scaffold4576_21884-28456' '(q6dw73|dgdg2_lotja : 627.0) Digalactosyldiacylglycerol synthase 2, chloroplast (EC 2.4.1.241) - Lotus japonicus & (at4g00550 : 593.0) encodes a UDP-galactose-dependent digalactosyldiacylglycerol(DGDG) synthase. Located in chloroplast outer membrane.; digalactosyl diacylglycerol deficient 2 (DGD2); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G11670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1186.0) & (original description: Putative DGD, Description = Digalactosyldiacylglycerol synthase 2, chloroplastic, PFAM = PF13692)' T '11.10.2' 'lipid metabolism.glycolipid synthesis.DGDG synthase' 'niben101scf02497_249493-258667' '(q6dw73|dgdg2_lotja : 645.0) Digalactosyldiacylglycerol synthase 2, chloroplast (EC 2.4.1.241) - Lotus japonicus & (at4g00550 : 615.0) encodes a UDP-galactose-dependent digalactosyldiacylglycerol(DGDG) synthase. Located in chloroplast outer membrane.; digalactosyl diacylglycerol deficient 2 (DGD2); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G11670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1230.0) & (original description: Putative DGD2, Description = Digalactosyldiacylglycerol synthase 2, chloroplastic, PFAM = PF00534)' T '11.10.2' 'lipid metabolism.glycolipid synthesis.DGDG synthase' 'niben101scf03320_344035-352986' '(q6dw76|dgdg1_soybn : 1138.0) Digalactosyldiacylglycerol synthase 1, chloroplast precursor (EC 2.4.1.241) - Glycine max (Soybean) & (at3g11670 : 1042.0) Responsible for the final assembly of galactolipids in photosynthetic membranes. Provides stability to the PS I core complex (e.g. subunits PsaD, PsaE).; DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1 (DGD1); BEST Arabidopsis thaliana protein match is: digalactosyl diacylglycerol deficient 2 (TAIR:AT4G00550.1); Has 183 Blast hits to 183 proteins in 35 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 152; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 2084.0) & (original description: Putative DGD1, Description = Digalactosyldiacylglycerol synthase 1, chloroplastic, PFAM = PF00534)' T '11.10.2' 'lipid metabolism.glycolipid synthesis.DGDG synthase' 'niben101scf03428_16908-24329' '(q6dw74|dgdg1_lotja : 1114.0) Digalactosyldiacylglycerol synthase 1, chloroplast precursor (EC 2.4.1.241) - Lotus japonicus & (at3g11670 : 1050.0) Responsible for the final assembly of galactolipids in photosynthetic membranes. Provides stability to the PS I core complex (e.g. subunits PsaD, PsaE).; DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1 (DGD1); BEST Arabidopsis thaliana protein match is: digalactosyl diacylglycerol deficient 2 (TAIR:AT4G00550.1); Has 183 Blast hits to 183 proteins in 35 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 152; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 2100.0) & (original description: Putative DGD1, Description = Digalactosyldiacylglycerol synthase 1, chloroplastic, PFAM = PF13692)' T '11.10.2' 'lipid metabolism.glycolipid synthesis.DGDG synthase' 'niben101scf05118_140748-149995' '(q6dw73|dgdg2_lotja : 645.0) Digalactosyldiacylglycerol synthase 2, chloroplast (EC 2.4.1.241) - Lotus japonicus & (at4g00550 : 621.0) encodes a UDP-galactose-dependent digalactosyldiacylglycerol(DGDG) synthase. Located in chloroplast outer membrane.; digalactosyl diacylglycerol deficient 2 (DGD2); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G11670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1242.0) & (original description: Putative DGD2, Description = Digalactosyldiacylglycerol synthase 2, chloroplastic, PFAM = PF13692)' T '11.10.2' 'lipid metabolism.glycolipid synthesis.DGDG synthase' 'niben101scf08081_356301-363399' '(q6dw73|dgdg2_lotja : 640.0) Digalactosyldiacylglycerol synthase 2, chloroplast (EC 2.4.1.241) - Lotus japonicus & (at4g00550 : 625.0) encodes a UDP-galactose-dependent digalactosyldiacylglycerol(DGDG) synthase. Located in chloroplast outer membrane.; digalactosyl diacylglycerol deficient 2 (DGD2); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G11670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1250.0) & (original description: Putative DGD2, Description = Digalactosyldiacylglycerol synthase 2, chloroplastic, PFAM = PF13692)' T '11.10.3' 'lipid metabolism.glycolipid synthesis.UDP-sulfoquinovose synthase' 'niben101scf01998_868021-872244' '(q84ki6|sqd1_spiol : 777.0) UDP-sulfoquinovose synthase, chloroplast precursor (EC 3.13.1.1) (Sulfite:UDP-glucose sulfotransferase) (Sulfolipid biosynthesis protein) (SoSQD1) - Spinacia oleracea (Spinach) & (at4g33030 : 752.0) involved in sulfolipid biosynthesis; sulfoquinovosyldiacylglycerol 1 (SQD1); FUNCTIONS IN: UDPsulfoquinovose synthase activity, sulfotransferase activity, zinc ion binding; INVOLVED IN: cellular response to phosphate starvation, sulfolipid biosynthetic process, glycolipid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); Has 10748 Blast hits to 10748 proteins in 2398 species: Archae - 273; Bacteria - 7931; Metazoa - 289; Fungi - 89; Plants - 466; Viruses - 5; Other Eukaryotes - 1695 (source: NCBI BLink). & (gnl|cdd|36585 : 340.0) no description available & (gnl|cdd|30800 : 124.0) no description available & (reliability: 1504.0) & (original description: Putative SQD1, Description = UDP-sulfoquinovose synthase, chloroplastic, PFAM = PF01370)' T '11.10.3' 'lipid metabolism.glycolipid synthesis.UDP-sulfoquinovose synthase' 'niben101scf06748_268525-272820' '(q84ki6|sqd1_spiol : 779.0) UDP-sulfoquinovose synthase, chloroplast precursor (EC 3.13.1.1) (Sulfite:UDP-glucose sulfotransferase) (Sulfolipid biosynthesis protein) (SoSQD1) - Spinacia oleracea (Spinach) & (at4g33030 : 754.0) involved in sulfolipid biosynthesis; sulfoquinovosyldiacylglycerol 1 (SQD1); FUNCTIONS IN: UDPsulfoquinovose synthase activity, sulfotransferase activity, zinc ion binding; INVOLVED IN: cellular response to phosphate starvation, sulfolipid biosynthetic process, glycolipid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); Has 10748 Blast hits to 10748 proteins in 2398 species: Archae - 273; Bacteria - 7931; Metazoa - 289; Fungi - 89; Plants - 466; Viruses - 5; Other Eukaryotes - 1695 (source: NCBI BLink). & (gnl|cdd|36585 : 338.0) no description available & (gnl|cdd|30800 : 121.0) no description available & (reliability: 1508.0) & (original description: Putative SQD1, Description = UDP-sulfoquinovose synthase, chloroplastic, PFAM = PF01370)' T '11.10.4' 'lipid metabolism.glycolipid synthesis.sulfolipid synthase' 'niben044scf00003503ctg001_3357-10315' '(at5g01220 : 701.0) involved in sulfolipid biosynthesis; sulfoquinovosyldiacylglycerol 2 (SQD2); FUNCTIONS IN: UDP-glycosyltransferase activity, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: cellular response to phosphate starvation, sulfolipid biosynthetic process, glycolipid biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G59070.1); Has 35941 Blast hits to 35876 proteins in 3155 species: Archae - 1250; Bacteria - 26211; Metazoa - 142; Fungi - 236; Plants - 1690; Viruses - 2; Other Eukaryotes - 6410 (source: NCBI BLink). & (gnl|cdd|36327 : 250.0) no description available & (gnl|cdd|30787 : 133.0) no description available & (reliability: 1402.0) & (original description: Putative SQD2, Description = Sulfoquinovosyl transferase SQD2, PFAM = PF13692;PF13439)' T '11.10.4' 'lipid metabolism.glycolipid synthesis.sulfolipid synthase' 'niben101scf00348_1066292-1076475' '(at5g01220 : 691.0) involved in sulfolipid biosynthesis; sulfoquinovosyldiacylglycerol 2 (SQD2); FUNCTIONS IN: UDP-glycosyltransferase activity, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: cellular response to phosphate starvation, sulfolipid biosynthetic process, glycolipid biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G59070.1); Has 35941 Blast hits to 35876 proteins in 3155 species: Archae - 1250; Bacteria - 26211; Metazoa - 142; Fungi - 236; Plants - 1690; Viruses - 2; Other Eukaryotes - 6410 (source: NCBI BLink). & (gnl|cdd|36327 : 248.0) no description available & (gnl|cdd|30787 : 130.0) no description available & (reliability: 1382.0) & (original description: Putative SQD2, Description = Sulfoquinovosyl transferase SQD2, PFAM = PF13692;PF13439)' T '11.10.4' 'lipid metabolism.glycolipid synthesis.sulfolipid synthase' 'niben101scf03325_1498-20816' '(at5g01220 : 696.0) involved in sulfolipid biosynthesis; sulfoquinovosyldiacylglycerol 2 (SQD2); FUNCTIONS IN: UDP-glycosyltransferase activity, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: cellular response to phosphate starvation, sulfolipid biosynthetic process, glycolipid biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G59070.1); Has 35941 Blast hits to 35876 proteins in 3155 species: Archae - 1250; Bacteria - 26211; Metazoa - 142; Fungi - 236; Plants - 1690; Viruses - 2; Other Eukaryotes - 6410 (source: NCBI BLink). & (gnl|cdd|36327 : 260.0) no description available & (gnl|cdd|30787 : 133.0) no description available & (reliability: 1392.0) & (original description: Putative SQD2, Description = Sulfoquinovosyl transferase SQD2, PFAM = PF13692;PF13439)' T '11.10.5' 'lipid metabolism.glycolipid synthesis.chloroplastic UGPase' '' '' '11.10.1001' 'lipid metabolism.galactolipid synthesis' '2-o-glycerol-beta-d-galactose' '' M '11.10.1002' 'lipid metabolism.galactolipid synthesis' 'digalactosylglycerol' '' M '11.1001' 'lipid metabolism' 'acetyloleanolic acid' 'lipid metabolism' M '11.1002' 'lipid metabolism' 'fa 16:0' 'lipid metabolism' M '11.1003' 'lipid metabolism' 'fa 18:0' 'lipid metabolism' M '11.1004' 'lipid metabolism' 'oleic acid' 'lipid metabolism' M '11.1005' 'lipid metabolism' 'oleyl alcohol' 'lipid metabolism' M '11.1006' 'lipid metabolism' 'oleyl oleate' 'lipid metabolism' M '11.1007' 'lipid metabolism' 'palmitic acid' 'lipid metabolism' M '11.1008' 'lipid metabolism' 'pentadecanoic acid' 'lipid metabolism' M '11.1009' 'lipid metabolism' 'stearic acid' 'lipid metabolism' M '11.1010' 'lipid metabolism' 'tridecanoic acid' 'lipid metabolism' M '11.1011' 'lipid metabolism' 'undecanoic acid' 'lipid metabolism' M '11.1012' 'lipid metabolism' 'heptanoic acid' 'lipid metabolism, also called oenanthic acid' M '11.1013' 'lipid metabolism' 'choline' 'lipid metabolism, glycerolipids' M '11.1014' 'lipid metabolism' 'dioleoylglycerol' 'lipid metabolism, glycerolipids' M '11.1015' 'lipid metabolism' 'diphosphatidylglycerol' 'lipid metabolism, glycerolipids' M '11.1016' 'lipid metabolism' 'ethanolamine' 'lipid metabolism, glycerolipids' M '11.1017' 'lipid metabolism' 'glycerol' 'lipid metabolism, glycerolipids' M '11.1018' 'lipid metabolism' 'glycerol-2-p' 'lipid metabolism, glycerolipids' M '11.1019' 'lipid metabolism' 'phosphatidylcholine' 'lipid metabolism, glycerolipids' M '11.1020' 'lipid metabolism' 'phosphatidylethanolamine glycine' 'lipid metabolism, glycerolipids' M '11.1021' 'lipid metabolism' 'phosphatidylserine' 'lipid metabolism, glycerolipids' M '11.1022' 'lipid metabolism' 'trilinolein' 'lipid metabolism, glycerolipids' M '11.1023' 'lipid metabolism' 'triolein' 'lipid metabolism, glycerolipids' M '11.1024' 'lipid metabolism' 'linoleic acid' 'lipid metabolism, is FA 9,12(Z,Z)-18:2' M '11.1025' 'lipid metabolism' 'acetyl-coa' 'lipid metabolism, organic acids' M '11.1026' 'lipid metabolism' 'coa-sh' 'lipid metabolism, organic acids' M '11.1027' 'lipid metabolism' 'coa-s-s-coa' 'lipid metabolism, organic acids' M '11.1028' 'lipid metabolism' 'glycerol-3-p' 'lipid metabolism; hormone metabolism.auxin (is polar fraction)' M '11.1029' 'lipid metabolism' 'linolenic acid' 'lipid metabolism, is FA 9,12,15(Z,Z,Z)-18:3' M '11.1030' 'lipid metabolism' '3(e)-hexenal' '' M '11.1031' 'lipid metabolism' '3(z)-hexenal' '' M '11.1032' 'lipid metabolism' 'hexanal' '' M '11.1033' 'lipid metabolism' 'hexanoic acid' '' M '11.1034' 'lipid metabolism' 'pentanoic acid' '' M '11.1035' 'lipid metabolism' 'hexanol' '' M '11.1036' 'lipid metabolism' '2(e)-hexenal' 'volatile' M '11.1037' 'lipid metabolism' '3(z)-hexen-1-ol' 'volatile' M '11.1038' 'lipid metabolism' '3(e)-hexenol' 'volatile' M '11.1039' 'lipid metabolism' '2-ethylhexanoic acid' '' M '11.1040' 'lipid metabolism' '13-hydroperoxylinolenic acid' '' M '11.1041' 'lipid metabolism' '13(s)-hydroperoxy-9-(z),11(e)-octadecadienoic acid' '' M '12' 'N-metabolism' '' '' '12.1' 'N-metabolism.nitrate metabolism' '' '' '12.1.1' 'N-metabolism.nitrate metabolism.NR' 'nbv0.3scaffold70661_1518-6481' '(p36859|nia_pethy : 868.0) Nitrate reductase [NADH] (EC 1.7.1.1) (NR) - Petunia hybrida (Petunia) & (at1g37130 : 772.0) Identified as a mutant resistant to chlorate. Encodes nitrate reductase structural gene. Involved in nitrate assimilation. Has nitrate reductase activity. Up-regulated by the fungus P. indica. Binds transcription factor At2g35940.; nitrate reductase 2 (NIA2); FUNCTIONS IN: nitrate reductase activity, nitrate reductase (NADH) activity; INVOLVED IN: nitric oxide biosynthetic process, nitrate assimilation, response to light stimulus, response to symbiotic fungus; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitrate reductase NADH dependent (InterPro:IPR012137), Cytochrome b5, heme-binding site (InterPro:IPR018506), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Immunoglobulin E-set (InterPro:IPR014756), Cytochrome b5 (InterPro:IPR001199), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Oxidoreductase, molybdopterin binding site (InterPro:IPR022407), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066); BEST Arabidopsis thaliana protein match is: nitrate reductase 1 (TAIR:AT1G77760.1); Has 14440 Blast hits to 14066 proteins in 2196 species: Archae - 142; Bacteria - 6584; Metazoa - 1752; Fungi - 2225; Plants - 1476; Viruses - 3; Other Eukaryotes - 2258 (source: NCBI BLink). & (gnl|cdd|29407 : 671.0) no description available & (gnl|cdd|35755 : 535.0) no description available & (reliability: 1544.0) & (original description: Putative niaD, Description = Nitrate reductase, PFAM = PF00174;PF03404)' T '12.1.1' 'N-metabolism.nitrate metabolism.NR' 'nbv0.5scaffold558_556606-563863' '(p08509|nia2_tobac : 1820.0) Nitrate reductase [NADH] 2 (EC 1.7.1.1) (NR2) - Nicotiana tabacum (Common tobacco) & (at1g37130 : 1448.0) Identified as a mutant resistant to chlorate. Encodes nitrate reductase structural gene. Involved in nitrate assimilation. Has nitrate reductase activity. Up-regulated by the fungus P. indica. Binds transcription factor At2g35940.; nitrate reductase 2 (NIA2); FUNCTIONS IN: nitrate reductase activity, nitrate reductase (NADH) activity; INVOLVED IN: nitric oxide biosynthetic process, nitrate assimilation, response to light stimulus, response to symbiotic fungus; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitrate reductase NADH dependent (InterPro:IPR012137), Cytochrome b5, heme-binding site (InterPro:IPR018506), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Immunoglobulin E-set (InterPro:IPR014756), Cytochrome b5 (InterPro:IPR001199), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Oxidoreductase, molybdopterin binding site (InterPro:IPR022407), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066); BEST Arabidopsis thaliana protein match is: nitrate reductase 1 (TAIR:AT1G77760.1); Has 14440 Blast hits to 14066 proteins in 2196 species: Archae - 142; Bacteria - 6584; Metazoa - 1752; Fungi - 2225; Plants - 1476; Viruses - 3; Other Eukaryotes - 2258 (source: NCBI BLink). & (gnl|cdd|29407 : 692.0) no description available & (gnl|cdd|35755 : 554.0) no description available & (reliability: 2896.0) & (original description: Putative NIA2, Description = Nitrate reductase [NADH] 2, PFAM = PF00173;PF03404;PF00175;PF00970;PF00174)' T '12.1.1' 'N-metabolism.nitrate metabolism.NR' 'niben101scf34590_89114-96657' '(p08509|nia2_tobac : 1819.0) Nitrate reductase [NADH] 2 (EC 1.7.1.1) (NR2) - Nicotiana tabacum (Common tobacco) & (at1g37130 : 1446.0) Identified as a mutant resistant to chlorate. Encodes nitrate reductase structural gene. Involved in nitrate assimilation. Has nitrate reductase activity. Up-regulated by the fungus P. indica. Binds transcription factor At2g35940.; nitrate reductase 2 (NIA2); FUNCTIONS IN: nitrate reductase activity, nitrate reductase (NADH) activity; INVOLVED IN: nitric oxide biosynthetic process, nitrate assimilation, response to light stimulus, response to symbiotic fungus; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitrate reductase NADH dependent (InterPro:IPR012137), Cytochrome b5, heme-binding site (InterPro:IPR018506), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Immunoglobulin E-set (InterPro:IPR014756), Cytochrome b5 (InterPro:IPR001199), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Oxidoreductase, molybdopterin binding site (InterPro:IPR022407), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066); BEST Arabidopsis thaliana protein match is: nitrate reductase 1 (TAIR:AT1G77760.1); Has 14440 Blast hits to 14066 proteins in 2196 species: Archae - 142; Bacteria - 6584; Metazoa - 1752; Fungi - 2225; Plants - 1476; Viruses - 3; Other Eukaryotes - 2258 (source: NCBI BLink). & (gnl|cdd|29407 : 690.0) no description available & (gnl|cdd|35755 : 553.0) no description available & (reliability: 2892.0) & (original description: Putative NIA2, Description = Nitrate reductase [NADH] 2, PFAM = PF03404;PF00970;PF00173;PF00174;PF00175)' T '12.1.2' 'N-metabolism.nitrate metabolism.nitrite reductase' 'nbv0.3scaffold25448_2875-9394' '(p38500|nir_betve : 964.0) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) - Betula verrucosa (White birch) (Betula pendula) & (at2g15620 : 931.0) Involved in the second step of nitrate assimilation. Its expression is induced by nitrate.; nitrite reductase 1 (NIR1); FUNCTIONS IN: ferredoxin-nitrate reductase activity, nitrite reductase (NO-forming) activity; INVOLVED IN: response to salt stress, response to nitrate; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: sulfite reductase (TAIR:AT5G04590.1); Has 5959 Blast hits to 5874 proteins in 1733 species: Archae - 294; Bacteria - 4692; Metazoa - 2; Fungi - 157; Plants - 240; Viruses - 0; Other Eukaryotes - 574 (source: NCBI BLink). & (gnl|cdd|83089 : 640.0) no description available & (gnl|cdd|35780 : 607.0) no description available & (reliability: 1862.0) & (original description: Putative nii4, Description = Nitrite reductase, PFAM = PF01077;PF01077;PF03460;PF03460)' T '12.1.2' 'N-metabolism.nitrate metabolism.nitrite reductase' 'nbv0.5scaffold1361_236391-242921' '(p38500|nir_betve : 964.0) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) - Betula verrucosa (White birch) (Betula pendula) & (at2g15620 : 931.0) Involved in the second step of nitrate assimilation. Its expression is induced by nitrate.; nitrite reductase 1 (NIR1); FUNCTIONS IN: ferredoxin-nitrate reductase activity, nitrite reductase (NO-forming) activity; INVOLVED IN: response to salt stress, response to nitrate; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: sulfite reductase (TAIR:AT5G04590.1); Has 5959 Blast hits to 5874 proteins in 1733 species: Archae - 294; Bacteria - 4692; Metazoa - 2; Fungi - 157; Plants - 240; Viruses - 0; Other Eukaryotes - 574 (source: NCBI BLink). & (gnl|cdd|83089 : 640.0) no description available & (gnl|cdd|35780 : 607.0) no description available & (reliability: 1862.0) & (original description: Putative nii4, Description = Nitrite reductase, PFAM = PF03460;PF03460;PF01077;PF01077)' T '12.1.2' 'N-metabolism.nitrate metabolism.nitrite reductase' 'niben044scf00010341ctg004_1658-6946' '(p38500|nir_betve : 959.0) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) - Betula verrucosa (White birch) (Betula pendula) & (at2g15620 : 927.0) Involved in the second step of nitrate assimilation. Its expression is induced by nitrate.; nitrite reductase 1 (NIR1); FUNCTIONS IN: ferredoxin-nitrate reductase activity, nitrite reductase (NO-forming) activity; INVOLVED IN: response to salt stress, response to nitrate; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: sulfite reductase (TAIR:AT5G04590.1); Has 5959 Blast hits to 5874 proteins in 1733 species: Archae - 294; Bacteria - 4692; Metazoa - 2; Fungi - 157; Plants - 240; Viruses - 0; Other Eukaryotes - 574 (source: NCBI BLink). & (gnl|cdd|83089 : 644.0) no description available & (gnl|cdd|35780 : 608.0) no description available & (reliability: 1854.0) & (original description: Putative nii4, Description = Nitrite reductase, PFAM = PF03460;PF03460;PF01077;PF01077)' T '12.1.2' 'N-metabolism.nitrate metabolism.nitrite reductase' 'niben101scf00321_253115-260003' '(p38500|nir_betve : 746.0) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) - Betula verrucosa (White birch) (Betula pendula) & (at2g15620 : 721.0) Involved in the second step of nitrate assimilation. Its expression is induced by nitrate.; nitrite reductase 1 (NIR1); FUNCTIONS IN: ferredoxin-nitrate reductase activity, nitrite reductase (NO-forming) activity; INVOLVED IN: response to salt stress, response to nitrate; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: sulfite reductase (TAIR:AT5G04590.1); Has 5959 Blast hits to 5874 proteins in 1733 species: Archae - 294; Bacteria - 4692; Metazoa - 2; Fungi - 157; Plants - 240; Viruses - 0; Other Eukaryotes - 574 (source: NCBI BLink). & (gnl|cdd|35780 : 482.0) no description available & (gnl|cdd|83089 : 474.0) no description available & (reliability: 1442.0) & (original description: Putative nii4, Description = Nitrite reductase, PFAM = PF01077;PF01077;PF03460;PF03460;PF03460)' T '12.1.2' 'N-metabolism.nitrate metabolism.nitrite reductase' 'niben101scf02393_99502-104790' '(p38500|nir_betve : 959.0) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) - Betula verrucosa (White birch) (Betula pendula) & (at2g15620 : 927.0) Involved in the second step of nitrate assimilation. Its expression is induced by nitrate.; nitrite reductase 1 (NIR1); FUNCTIONS IN: ferredoxin-nitrate reductase activity, nitrite reductase (NO-forming) activity; INVOLVED IN: response to salt stress, response to nitrate; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: sulfite reductase (TAIR:AT5G04590.1); Has 5959 Blast hits to 5874 proteins in 1733 species: Archae - 294; Bacteria - 4692; Metazoa - 2; Fungi - 157; Plants - 240; Viruses - 0; Other Eukaryotes - 574 (source: NCBI BLink). & (gnl|cdd|83089 : 644.0) no description available & (gnl|cdd|35780 : 608.0) no description available & (reliability: 1854.0) & (original description: Putative nii4, Description = Nitrite reductase, PFAM = PF03460;PF03460;PF01077;PF01077)' T '12.1.2' 'N-metabolism.nitrate metabolism.nitrite reductase' 'niben101scf02408_247512-252781' '(p05314|nir_spiol : 952.0) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) - Spinacia oleracea (Spinach) & (at2g15620 : 944.0) Involved in the second step of nitrate assimilation. Its expression is induced by nitrate.; nitrite reductase 1 (NIR1); FUNCTIONS IN: ferredoxin-nitrate reductase activity, nitrite reductase (NO-forming) activity; INVOLVED IN: response to salt stress, response to nitrate; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: sulfite reductase (TAIR:AT5G04590.1); Has 5959 Blast hits to 5874 proteins in 1733 species: Archae - 294; Bacteria - 4692; Metazoa - 2; Fungi - 157; Plants - 240; Viruses - 0; Other Eukaryotes - 574 (source: NCBI BLink). & (gnl|cdd|83089 : 655.0) no description available & (gnl|cdd|35780 : 621.0) no description available & (reliability: 1888.0) & (original description: Putative nii3, Description = Nitrite reductase, PFAM = PF01077;PF01077;PF03460;PF03460)' T '12.1.2' 'N-metabolism.nitrate metabolism.nitrite reductase' 'niben101scf07103_325016-331364' '(p05314|nir_spiol : 951.0) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) - Spinacia oleracea (Spinach) & (at2g15620 : 939.0) Involved in the second step of nitrate assimilation. Its expression is induced by nitrate.; nitrite reductase 1 (NIR1); FUNCTIONS IN: ferredoxin-nitrate reductase activity, nitrite reductase (NO-forming) activity; INVOLVED IN: response to salt stress, response to nitrate; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: sulfite reductase (TAIR:AT5G04590.1); Has 5959 Blast hits to 5874 proteins in 1733 species: Archae - 294; Bacteria - 4692; Metazoa - 2; Fungi - 157; Plants - 240; Viruses - 0; Other Eukaryotes - 574 (source: NCBI BLink). & (gnl|cdd|83089 : 657.0) no description available & (gnl|cdd|35780 : 615.0) no description available & (reliability: 1878.0) & (original description: Putative nii3, Description = Nitrite reductase, PFAM = PF01077;PF01077;PF03460;PF03460)' T '12.2' 'N-metabolism.ammonia metabolism' '' '' '12.2.1' 'N-metabolism.ammonia metabolism.glutamate synthase' '' '' '12.2.1.1' 'N-metabolism.ammonia metabolism.glutamate synthase.ferredoxin dependent' 'nbv0.3scaffold18483_1-26068' '(at5g04140 : 1939.0) Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation.; glutamate synthase 1 (GLU1); FUNCTIONS IN: protein binding, glutamate synthase (ferredoxin) activity; INVOLVED IN: response to light stimulus, photorespiration; LOCATED IN: apoplast, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamate synthase, alpha subunit, C-terminal (InterPro:IPR002489), Glutamate synthase, central-N (InterPro:IPR006982), Glutamate synthase, central-C (InterPro:IPR002932), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: glutamate synthase 2 (TAIR:AT2G41220.1); Has 17415 Blast hits to 17302 proteins in 2024 species: Archae - 267; Bacteria - 5686; Metazoa - 111; Fungi - 160; Plants - 179; Viruses - 0; Other Eukaryotes - 11012 (source: NCBI BLink). & (q43155|gltb_spiol : 1910.0) Ferredoxin-dependent glutamate synthase, chloroplast (EC 1.4.7.1) (Fd-GOGAT) - Spinacia oleracea (Spinach) & (gnl|cdd|35620 : 1637.0) no description available & (gnl|cdd|83964 : 1072.0) no description available & (reliability: 3878.0) & (original description: Putative glsF, Description = Glutamate synthase (Ferredoxin), PFAM = PF04898;PF01645;PF00310)' T '12.2.1.1' 'N-metabolism.ammonia metabolism.glutamate synthase.ferredoxin dependent' 'nbv0.5scaffold6509_7240-61528' '(at5g04140 : 2784.0) Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation.; glutamate synthase 1 (GLU1); FUNCTIONS IN: protein binding, glutamate synthase (ferredoxin) activity; INVOLVED IN: response to light stimulus, photorespiration; LOCATED IN: apoplast, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamate synthase, alpha subunit, C-terminal (InterPro:IPR002489), Glutamate synthase, central-N (InterPro:IPR006982), Glutamate synthase, central-C (InterPro:IPR002932), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: glutamate synthase 2 (TAIR:AT2G41220.1); Has 17415 Blast hits to 17302 proteins in 2024 species: Archae - 267; Bacteria - 5686; Metazoa - 111; Fungi - 160; Plants - 179; Viruses - 0; Other Eukaryotes - 11012 (source: NCBI BLink). & (q43155|gltb_spiol : 2768.0) Ferredoxin-dependent glutamate synthase, chloroplast (EC 1.4.7.1) (Fd-GOGAT) - Spinacia oleracea (Spinach) & (gnl|cdd|35620 : 2366.0) no description available & (gnl|cdd|83964 : 1615.0) no description available & (reliability: 5568.0) & (original description: Putative glsF, Description = Ferredoxin-dependent glutamate synthase, PFAM = PF01493;PF01645;PF04898;PF00310)' T '12.2.1.1' 'N-metabolism.ammonia metabolism.glutamate synthase.ferredoxin dependent' 'niben101scf04198_48695-110193' '(at5g04140 : 2798.0) Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation.; glutamate synthase 1 (GLU1); FUNCTIONS IN: protein binding, glutamate synthase (ferredoxin) activity; INVOLVED IN: response to light stimulus, photorespiration; LOCATED IN: apoplast, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamate synthase, alpha subunit, C-terminal (InterPro:IPR002489), Glutamate synthase, central-N (InterPro:IPR006982), Glutamate synthase, central-C (InterPro:IPR002932), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: glutamate synthase 2 (TAIR:AT2G41220.1); Has 17415 Blast hits to 17302 proteins in 2024 species: Archae - 267; Bacteria - 5686; Metazoa - 111; Fungi - 160; Plants - 179; Viruses - 0; Other Eukaryotes - 11012 (source: NCBI BLink). & (q43155|gltb_spiol : 2780.0) Ferredoxin-dependent glutamate synthase, chloroplast (EC 1.4.7.1) (Fd-GOGAT) - Spinacia oleracea (Spinach) & (gnl|cdd|35620 : 2378.0) no description available & (gnl|cdd|83964 : 1626.0) no description available & (reliability: 5596.0) & (original description: Putative GLU1, Description = Ferredoxin-dependent glutamate synthase 1, chloroplastic/mitochondrial, PFAM = PF01645;PF00310;PF04898;PF01493)' T '12.2.1.1' 'N-metabolism.ammonia metabolism.glutamate synthase.ferredoxin dependent' 'niben101scf04198_103310-107382' '(q43155|gltb_spiol : 369.0) Ferredoxin-dependent glutamate synthase, chloroplast (EC 1.4.7.1) (Fd-GOGAT) - Spinacia oleracea (Spinach) & (at2g41220 : 365.0) Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression is most abundant in root.; glutamate synthase 2 (GLU2); FUNCTIONS IN: glutamate synthase (ferredoxin) activity; INVOLVED IN: oxidation reduction, nitrogen compound metabolic process, glutamate biosynthetic process, metabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Glutamate synthase, alpha subunit, C-terminal (InterPro:IPR002489), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamate synthase, central-N (InterPro:IPR006982), Glutamate synthase, central-C (InterPro:IPR002932), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: glutamate synthase 1 (TAIR:AT5G04140.1); Has 17295 Blast hits to 17192 proteins in 1999 species: Archae - 278; Bacteria - 5572; Metazoa - 117; Fungi - 161; Plants - 174; Viruses - 0; Other Eukaryotes - 10993 (source: NCBI BLink). & (gnl|cdd|35620 : 319.0) no description available & (gnl|cdd|29611 : 281.0) no description available & (reliability: 730.0) & (original description: Putative glsF, Description = Glutamate synthase (Ferredoxin), PFAM = PF01493;PF01493)' T '12.2.1.1' 'N-metabolism.ammonia metabolism.glutamate synthase.ferredoxin dependent' 'niben101scf12966_3386-59962' '(at5g04140 : 2786.0) Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation.; glutamate synthase 1 (GLU1); FUNCTIONS IN: protein binding, glutamate synthase (ferredoxin) activity; INVOLVED IN: response to light stimulus, photorespiration; LOCATED IN: apoplast, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamate synthase, alpha subunit, C-terminal (InterPro:IPR002489), Glutamate synthase, central-N (InterPro:IPR006982), Glutamate synthase, central-C (InterPro:IPR002932), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: glutamate synthase 2 (TAIR:AT2G41220.1); Has 17415 Blast hits to 17302 proteins in 2024 species: Archae - 267; Bacteria - 5686; Metazoa - 111; Fungi - 160; Plants - 179; Viruses - 0; Other Eukaryotes - 11012 (source: NCBI BLink). & (q43155|gltb_spiol : 2779.0) Ferredoxin-dependent glutamate synthase, chloroplast (EC 1.4.7.1) (Fd-GOGAT) - Spinacia oleracea (Spinach) & (gnl|cdd|35620 : 2373.0) no description available & (gnl|cdd|83964 : 1624.0) no description available & (reliability: 5572.0) & (original description: Putative GLU2, Description = Ferredoxin-dependent glutamate synthase 2, chloroplastic, PFAM = PF04898;PF01645;PF00310;PF01493)' T '12.2.1.2' 'N-metabolism.ammonia metabolism.glutamate synthase.NADH dependent' 'niben044scf00010356ctg004_1-4248' '(q03460|glsn_medsa : 584.0) Glutamate synthase [NADH], chloroplast precursor (EC 1.4.1.14) (NADH-GOGAT) - Medicago sativa (Alfalfa) & (gnl|cdd|35620 : 569.0) no description available & (at5g53460 : 565.0) NADH-dependent glutamate synthase; NADH-dependent glutamate synthase 1 (GLT1); CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Glutamine amidotransferase, class-II (InterPro:IPR000583), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamate synthase, alpha subunit, C-terminal (InterPro:IPR002489), Glutamate synthase, NADH/NADPH, small subunit 1 (InterPro:IPR006005), Adrenodoxin reductase (InterPro:IPR000759), Fumarate reductase, C-terminal (InterPro:IPR012285), Glutamate synthase, central-N (InterPro:IPR006982), NAD(P)-binding domain (InterPro:IPR016040), Glutamate synthase, eukaryotic (InterPro:IPR012220), Alpha-helical ferredoxin (InterPro:IPR009051), Glutamate synthase, central-C (InterPro:IPR002932), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: glutamate synthase 1 (TAIR:AT5G04140.1). & (gnl|cdd|84303 : 476.0) no description available & (reliability: 1130.0) & (original description: Putative glt1, Description = Glutamate synthase, NADH/NADPH, small subunit, PFAM = PF07992;PF07992)' T '12.2.1.2' 'N-metabolism.ammonia metabolism.glutamate synthase.NADH dependent' 'niben101scf02290_231020-244553' '(at5g53460 : 3579.0) NADH-dependent glutamate synthase; NADH-dependent glutamate synthase 1 (GLT1); CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Glutamine amidotransferase, class-II (InterPro:IPR000583), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamate synthase, alpha subunit, C-terminal (InterPro:IPR002489), Glutamate synthase, NADH/NADPH, small subunit 1 (InterPro:IPR006005), Adrenodoxin reductase (InterPro:IPR000759), Fumarate reductase, C-terminal (InterPro:IPR012285), Glutamate synthase, central-N (InterPro:IPR006982), NAD(P)-binding domain (InterPro:IPR016040), Glutamate synthase, eukaryotic (InterPro:IPR012220), Alpha-helical ferredoxin (InterPro:IPR009051), Glutamate synthase, central-C (InterPro:IPR002932), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: glutamate synthase 1 (TAIR:AT5G04140.1). & (q03460|glsn_medsa : 3566.0) Glutamate synthase [NADH], chloroplast precursor (EC 1.4.1.14) (NADH-GOGAT) - Medicago sativa (Alfalfa) & (gnl|cdd|35620 : 3243.0) no description available & (gnl|cdd|83964 : 1590.0) no description available & (reliability: 7158.0) & (original description: Putative GLT1, Description = Glutamate synthase 1 [NADH], chloroplastic, PFAM = PF07992;PF01645;PF04898;PF01493;PF00310;PF14691)' T '12.2.2' 'N-metabolism.ammonia metabolism.glutamine synthetase' 'nbv0.3scaffold19399_3069-6547' '(at3g53180 : 82.4) glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases; FUNCTIONS IN: glutamate-ammonia ligase activity, catalytic activity; INVOLVED IN: nitrogen compound metabolic process, N-terminal protein myristoylation, nitrogen fixation, metabolic process, glutamine biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746), Amidohydrolase 2 (InterPro:IPR006992); Has 14587 Blast hits to 14579 proteins in 2570 species: Archae - 338; Bacteria - 8803; Metazoa - 107; Fungi - 250; Plants - 55; Viruses - 0; Other Eukaryotes - 5034 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative MtN6, Description = Protein fluG, PFAM = PF04909)' T '12.2.2' 'N-metabolism.ammonia metabolism.glutamine synthetase' 'niben044scf00024600ctg001_5803-10422' '(at3g53180 : 107.0) glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases; FUNCTIONS IN: glutamate-ammonia ligase activity, catalytic activity; INVOLVED IN: nitrogen compound metabolic process, N-terminal protein myristoylation, nitrogen fixation, metabolic process, glutamine biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746), Amidohydrolase 2 (InterPro:IPR006992); Has 14587 Blast hits to 14579 proteins in 2570 species: Archae - 338; Bacteria - 8803; Metazoa - 107; Fungi - 250; Plants - 55; Viruses - 0; Other Eukaryotes - 5034 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative , Description = Glutamate-ammonia ligase-like protein, PFAM = PF00120;PF00120)' T '12.2.2' 'N-metabolism.ammonia metabolism.glutamine synthetase' 'niben044scf00052109ctg000_3075-6914' '(at3g53180 : 132.0) glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases; FUNCTIONS IN: glutamate-ammonia ligase activity, catalytic activity; INVOLVED IN: nitrogen compound metabolic process, N-terminal protein myristoylation, nitrogen fixation, metabolic process, glutamine biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746), Amidohydrolase 2 (InterPro:IPR006992); Has 14587 Blast hits to 14579 proteins in 2570 species: Archae - 338; Bacteria - 8803; Metazoa - 107; Fungi - 250; Plants - 55; Viruses - 0; Other Eukaryotes - 5034 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative MtN6, Description = Protein fluG, PFAM = PF04909)' T '12.2.2' 'N-metabolism.ammonia metabolism.glutamine synthetase' 'niben101scf00345_258217-264505' '(p12424|glna_nicpl : 677.0) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia ligase) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g37600 : 635.0) encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium; glutamine synthase clone R1 (GSR 1); FUNCTIONS IN: glutamate-ammonia ligase activity, copper ion binding; INVOLVED IN: nitrate assimilation, response to fructose stimulus, response to light stimulus, response to sucrose stimulus, response to glucose stimulus; LOCATED IN: cytosol, cytosolic ribosome, cell wall, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746); BEST Arabidopsis thaliana protein match is: glutamine synthase clone F11 (TAIR:AT1G66200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35902 : 568.0) no description available & (gnl|cdd|84537 : 234.0) no description available & (reliability: 1270.0) & (original description: Putative gln, Description = Glutamine synthetase, PFAM = PF03951;PF00120)' T '12.2.2' 'N-metabolism.ammonia metabolism.glutamine synthetase' 'niben101scf00824_69603-75957' '(p14656|gln11_orysa : 624.0) Glutamine synthetase cytosolic isozyme 1-1 (EC 6.3.1.2) (OsGLN1;1) (OsGS1;1) (Glutamate--ammonia ligase GLN1;1) (Glutamine synthetase shoot isozyme) - Oryza sativa (Rice) & (at5g37600 : 619.0) encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium; glutamine synthase clone R1 (GSR 1); FUNCTIONS IN: glutamate-ammonia ligase activity, copper ion binding; INVOLVED IN: nitrate assimilation, response to fructose stimulus, response to light stimulus, response to sucrose stimulus, response to glucose stimulus; LOCATED IN: cytosol, cytosolic ribosome, cell wall, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746); BEST Arabidopsis thaliana protein match is: glutamine synthase clone F11 (TAIR:AT1G66200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35902 : 562.0) no description available & (gnl|cdd|84537 : 230.0) no description available & (reliability: 1238.0) & (original description: Putative GLN1, Description = Glutamine synthetase cytosolic isozyme, PFAM = PF00120;PF03951)' T '12.2.2' 'N-metabolism.ammonia metabolism.glutamine synthetase' 'niben101scf00936_13183-16661' '(at3g53180 : 94.7) glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases; FUNCTIONS IN: glutamate-ammonia ligase activity, catalytic activity; INVOLVED IN: nitrogen compound metabolic process, N-terminal protein myristoylation, nitrogen fixation, metabolic process, glutamine biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746), Amidohydrolase 2 (InterPro:IPR006992); Has 14587 Blast hits to 14579 proteins in 2570 species: Archae - 338; Bacteria - 8803; Metazoa - 107; Fungi - 250; Plants - 55; Viruses - 0; Other Eukaryotes - 5034 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative MtN6, Description = Protein fluG, PFAM = PF04909)' T '12.2.2' 'N-metabolism.ammonia metabolism.glutamine synthetase' 'niben101scf00936_13191-17030' '(at3g53180 : 144.0) glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases; FUNCTIONS IN: glutamate-ammonia ligase activity, catalytic activity; INVOLVED IN: nitrogen compound metabolic process, N-terminal protein myristoylation, nitrogen fixation, metabolic process, glutamine biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746), Amidohydrolase 2 (InterPro:IPR006992); Has 14587 Blast hits to 14579 proteins in 2570 species: Archae - 338; Bacteria - 8803; Metazoa - 107; Fungi - 250; Plants - 55; Viruses - 0; Other Eukaryotes - 5034 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative MtN6, Description = Protein fluG, PFAM = PF04909)' T '12.2.2' 'N-metabolism.ammonia metabolism.glutamine synthetase' 'niben101scf01765_200099-206211' '(p12424|glna_nicpl : 665.0) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia ligase) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g37600 : 639.0) encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium; glutamine synthase clone R1 (GSR 1); FUNCTIONS IN: glutamate-ammonia ligase activity, copper ion binding; INVOLVED IN: nitrate assimilation, response to fructose stimulus, response to light stimulus, response to sucrose stimulus, response to glucose stimulus; LOCATED IN: cytosol, cytosolic ribosome, cell wall, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746); BEST Arabidopsis thaliana protein match is: glutamine synthase clone F11 (TAIR:AT1G66200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35902 : 573.0) no description available & (gnl|cdd|84537 : 231.0) no description available & (reliability: 1278.0) & (original description: Putative gln, Description = Glutamine synthetase, PFAM = PF00120;PF03951)' T '12.2.2' 'N-metabolism.ammonia metabolism.glutamine synthetase' 'niben101scf02330_100493-106327' '(o22506|glna2_dauca : 728.0) Glutamine synthetase, chloroplast precursor (EC 6.3.1.2) (Glutamate--ammonia ligase) (GS2) - Daucus carota (Carrot) & (at5g35630 : 677.0) chloroplastic glutamine synthetase; glutamine synthetase 2 (GS2); FUNCTIONS IN: glutamate-ammonia ligase activity; INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746); BEST Arabidopsis thaliana protein match is: glutamine synthase clone F11 (TAIR:AT1G66200.1); Has 8236 Blast hits to 8234 proteins in 2572 species: Archae - 144; Bacteria - 3324; Metazoa - 415; Fungi - 259; Plants - 1746; Viruses - 3; Other Eukaryotes - 2345 (source: NCBI BLink). & (gnl|cdd|35902 : 572.0) no description available & (gnl|cdd|84537 : 232.0) no description available & (reliability: 1354.0) & (original description: Putative gln, Description = Glutamine synthetase, PFAM = PF03951;PF00120)' T '12.2.2' 'N-metabolism.ammonia metabolism.glutamine synthetase' 'niben101scf03240_173118-178828' '(p12424|glna_nicpl : 674.0) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia ligase) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g37600 : 660.0) encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium; glutamine synthase clone R1 (GSR 1); FUNCTIONS IN: glutamate-ammonia ligase activity, copper ion binding; INVOLVED IN: nitrate assimilation, response to fructose stimulus, response to light stimulus, response to sucrose stimulus, response to glucose stimulus; LOCATED IN: cytosol, cytosolic ribosome, cell wall, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746); BEST Arabidopsis thaliana protein match is: glutamine synthase clone F11 (TAIR:AT1G66200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35902 : 563.0) no description available & (gnl|cdd|84537 : 225.0) no description available & (reliability: 1320.0) & (original description: Putative gln, Description = Glutamine synthetase, PFAM = PF03951;PF00120)' T '12.2.2' 'N-metabolism.ammonia metabolism.glutamine synthetase' 'niben101scf03734_190594-204546' '(at3g53180 : 1090.0) glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases; FUNCTIONS IN: glutamate-ammonia ligase activity, catalytic activity; INVOLVED IN: nitrogen compound metabolic process, N-terminal protein myristoylation, nitrogen fixation, metabolic process, glutamine biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746), Amidohydrolase 2 (InterPro:IPR006992); Has 14587 Blast hits to 14579 proteins in 2570 species: Archae - 338; Bacteria - 8803; Metazoa - 107; Fungi - 250; Plants - 55; Viruses - 0; Other Eukaryotes - 5034 (source: NCBI BLink). & (gnl|cdd|30523 : 300.0) no description available & (gnl|cdd|35902 : 133.0) no description available & (reliability: 2180.0) & (original description: Putative GSI, Description = Glutamine synthetase, PFAM = PF04909;PF00120)' T '12.2.2' 'N-metabolism.ammonia metabolism.glutamine synthetase' 'niben101scf04063_83668-110580' '(at3g53180 : 134.0) glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases; FUNCTIONS IN: glutamate-ammonia ligase activity, catalytic activity; INVOLVED IN: nitrogen compound metabolic process, N-terminal protein myristoylation, nitrogen fixation, metabolic process, glutamine biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746), Amidohydrolase 2 (InterPro:IPR006992); Has 14587 Blast hits to 14579 proteins in 2570 species: Archae - 338; Bacteria - 8803; Metazoa - 107; Fungi - 250; Plants - 55; Viruses - 0; Other Eukaryotes - 5034 (source: NCBI BLink). & (gnl|cdd|30523 : 81.1) no description available & (reliability: 268.0) & (original description: Putative GSI, Description = Glutamate-ammonia ligase-like protein, PFAM = PF00120)' T '12.2.99' 'N-metabolism.ammonia metabolism.unspecified' 'nbv0.3scaffold7965_33636-54561' '(at4g25840 : 389.0) glycerol-3-phosphatase 1 (GPP1); FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G57440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38125 : 244.0) no description available & (gnl|cdd|30982 : 136.0) no description available & (reliability: 778.0) & (original description: Putative GPP2, Description = (DL)-glycerol-3-phosphatase 2, PFAM = PF13419)' T '12.2.99' 'N-metabolism.ammonia metabolism.unspecified' 'nbv0.3scaffold9882_3794-13824' '(at4g25840 : 293.0) glycerol-3-phosphatase 1 (GPP1); FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G57440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38125 : 198.0) no description available & (gnl|cdd|30982 : 100.0) no description available & (reliability: 586.0) & (original description: Putative pudp, Description = Pseudouridine-5'-monophosphatase, PFAM = PF13419)' T '12.2.99' 'N-metabolism.ammonia metabolism.unspecified' 'niben101scf01438_917875-945247' '(at4g25840 : 392.0) glycerol-3-phosphatase 1 (GPP1); FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G57440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38125 : 246.0) no description available & (gnl|cdd|30982 : 136.0) no description available & (reliability: 784.0) & (original description: Putative GPP2, Description = (DL)-glycerol-3-phosphatase 2, PFAM = PF13419)' T '12.2.1001' 'N-metabolism.ammonia metabolism' 'ammonium' 'N-metabolism.ammonia metabolism' M '12.2.1002' 'N-metabolism.ammonia metabolism' 'glutamate' 'N-metabolism.ammonia metabolism; amino acid synthesis.alanine; amino acid degradation.alanine; amino acid synthesis.isoleucine; amino acid degradation.isoleucine; amino acid synthesis.leucineamino acid degradation.leucine; amino acid synthesis.lysine; amino acid degradation.lysine; amino acid synthesis.phenylalanine; amino acid synthesis.proline; amino acid degradation.proline; amino acid synthesis.arginine; amino acid degradation.arginine; amino acid synthesis.tryptophan; amino acid synthesis.tyrosine; amino acid synthesis.valine; amino acid degradation.valine; amino acid degradation.hydroxyproline; amino acid synthesis.asparagine; amino acid degradation.asparagines; amino acid degradation.cysteine; amino acid synthesis.glutamate; amino acid degradation.glutamate; amino acid synthesis.glutamine; amino acid degradation.glutamine; amino acid synthesis.histidine; Co-factor metabolism; tetrapyrrole synthesis; redox regulation; nucleotide metabolism.synthesis; C1-metabolism' M '12.2.1003' 'N-metabolism.ammonia metabolism' 'glutamine' 'N-metabolism.ammonia metabolism; amino acid synthesis.arginine; amino acid synthesis.tryptophan; amino acid synthesis.asparagines; amino acid degradation.asparagines; amino acid synthesis.glutamine; amino acid degradation.glutamine; amino acid synthesis.histidine; nucleotide metabolism.synthesis; nucleotide metabolism.degradation; C1-metabolism' M '12.3' 'N-metabolism.N-degradation' '' '' '12.3.1' 'N-metabolism.N-degradation.glutamate dehydrogenase' 'nbv0.3scaffold11864_3574-6831' '(q9lec8|dheb_nicpl : 829.0) Glutamate dehydrogenase B (EC 1.4.1.3) (GDH B) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g18170 : 750.0) Encodes the 43 kDa alpha-subunit of the glutamate dehydrogenase with a putative mitochondrial transit polypeptide and NAD(H)- and alpha-ketoglutarate-binding domains. Mitochondrial localization confirmed by subcellular fractionation. Combines in several ratios with GDH2 protein (GDH-beta) to form seven isoenzymes. Catalyzes the cleavage of glycine residues. May be involved in ammonia assimilation under conditions of inorganic nitrogen excess. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells.; glutamate dehydrogenase 1 (GDH1); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cadmium ion, response to salt stress, nitrogen compound metabolic process, response to absence of light; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), NAD(P)-binding domain (InterPro:IPR016040), Glutamate dehydrogenase (InterPro:IPR014362), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 3 (TAIR:AT3G03910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37461 : 508.0) no description available & (gnl|cdd|30682 : 448.0) no description available & (reliability: 1500.0) & (original description: Putative GDHB, Description = Glutamate dehydrogenase B, PFAM = PF02812;PF00208)' T '12.3.1' 'N-metabolism.N-degradation.glutamate dehydrogenase' 'niben044scf00024595ctg000_766-9099' '(at1g51720 : 930.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process, cellular amino acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), NAD(P)-binding domain (InterPro:IPR016040), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 2 (TAIR:AT5G07440.2); Has 7648 Blast hits to 7641 proteins in 2126 species: Archae - 285; Bacteria - 4383; Metazoa - 351; Fungi - 185; Plants - 378; Viruses - 0; Other Eukaryotes - 2066 (source: NCBI BLink). & (gnl|cdd|82980 : 498.0) no description available & (gnl|cdd|37461 : 440.0) no description available & (p52596|dhe3_vitvi : 143.0) Glutamate dehydrogenase (EC 1.4.1.3) (GDH) - Vitis vinifera (Grape) & (reliability: 1860.0) & (original description: Putative gdh, Description = Glutamate dehydrogenase, PFAM = PF00208;PF02812)' T '12.3.1' 'N-metabolism.N-degradation.glutamate dehydrogenase' 'niben101scf00293_215770-231650' '(at1g51720 : 1031.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process, cellular amino acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), NAD(P)-binding domain (InterPro:IPR016040), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 2 (TAIR:AT5G07440.2); Has 7648 Blast hits to 7641 proteins in 2126 species: Archae - 285; Bacteria - 4383; Metazoa - 351; Fungi - 185; Plants - 378; Viruses - 0; Other Eukaryotes - 2066 (source: NCBI BLink). & (gnl|cdd|82980 : 541.0) no description available & (gnl|cdd|37461 : 485.0) no description available & (p52596|dhe3_vitvi : 142.0) Glutamate dehydrogenase (EC 1.4.1.3) (GDH) - Vitis vinifera (Grape) & (reliability: 2062.0) & (original description: Putative gdhA, Description = Glutamate dehydrogenase, PFAM = PF00208;PF02812)' T '12.3.1' 'N-metabolism.N-degradation.glutamate dehydrogenase' 'niben101scf02015_157345-162109' '(q9lec8|dheb_nicpl : 845.0) Glutamate dehydrogenase B (EC 1.4.1.3) (GDH B) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g18170 : 767.0) Encodes the 43 kDa alpha-subunit of the glutamate dehydrogenase with a putative mitochondrial transit polypeptide and NAD(H)- and alpha-ketoglutarate-binding domains. Mitochondrial localization confirmed by subcellular fractionation. Combines in several ratios with GDH2 protein (GDH-beta) to form seven isoenzymes. Catalyzes the cleavage of glycine residues. May be involved in ammonia assimilation under conditions of inorganic nitrogen excess. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells.; glutamate dehydrogenase 1 (GDH1); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cadmium ion, response to salt stress, nitrogen compound metabolic process, response to absence of light; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), NAD(P)-binding domain (InterPro:IPR016040), Glutamate dehydrogenase (InterPro:IPR014362), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 3 (TAIR:AT3G03910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37461 : 523.0) no description available & (gnl|cdd|30682 : 461.0) no description available & (reliability: 1534.0) & (original description: Putative GDHB, Description = Glutamate dehydrogenase B, PFAM = PF00208;PF02812)' T '12.3.1' 'N-metabolism.N-degradation.glutamate dehydrogenase' 'niben101scf03679_490877-496815' '(o04937|dhea_nicpl : 838.0) Glutamate dehydrogenase A (EC 1.4.1.3) (GDH A) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g07440 : 766.0) Encodes the alpha-subunit of the glutamate dehydrogenase. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells.; glutamate dehydrogenase 2 (GDH2); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), NAD(P)-binding domain (InterPro:IPR016040), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 3 (TAIR:AT3G03910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37461 : 514.0) no description available & (gnl|cdd|30682 : 475.0) no description available & (reliability: 1532.0) & (original description: Putative GDHA, Description = Glutamate dehydrogenase A, PFAM = PF00208;PF02812)' T '12.3.1' 'N-metabolism.N-degradation.glutamate dehydrogenase' 'niben101scf07048_273025-277755' '(q9lec8|dheb_nicpl : 792.0) Glutamate dehydrogenase B (EC 1.4.1.3) (GDH B) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g18170 : 771.0) Encodes the 43 kDa alpha-subunit of the glutamate dehydrogenase with a putative mitochondrial transit polypeptide and NAD(H)- and alpha-ketoglutarate-binding domains. Mitochondrial localization confirmed by subcellular fractionation. Combines in several ratios with GDH2 protein (GDH-beta) to form seven isoenzymes. Catalyzes the cleavage of glycine residues. May be involved in ammonia assimilation under conditions of inorganic nitrogen excess. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells.; glutamate dehydrogenase 1 (GDH1); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cadmium ion, response to salt stress, nitrogen compound metabolic process, response to absence of light; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), NAD(P)-binding domain (InterPro:IPR016040), Glutamate dehydrogenase (InterPro:IPR014362), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 3 (TAIR:AT3G03910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37461 : 525.0) no description available & (gnl|cdd|30682 : 460.0) no description available & (reliability: 1542.0) & (original description: Putative GDHB, Description = Glutamate dehydrogenase B, PFAM = PF00208;PF02812)' T '12.3.1' 'N-metabolism.N-degradation.glutamate dehydrogenase' 'niben101scf08179_273771-280847' '(o04937|dhea_nicpl : 801.0) Glutamate dehydrogenase A (EC 1.4.1.3) (GDH A) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g07440 : 755.0) Encodes the alpha-subunit of the glutamate dehydrogenase. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells.; glutamate dehydrogenase 2 (GDH2); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), NAD(P)-binding domain (InterPro:IPR016040), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 3 (TAIR:AT3G03910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37461 : 513.0) no description available & (gnl|cdd|30682 : 481.0) no description available & (reliability: 1510.0) & (original description: Putative GDHA, Description = Glutamate dehydrogenase A, PFAM = PF02812;PF00208)' T '12.3.1' 'N-metabolism.N-degradation.glutamate dehydrogenase' 'niben101scf09205_114984-120847' '(o04937|dhea_nicpl : 808.0) Glutamate dehydrogenase A (EC 1.4.1.3) (GDH A) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g07440 : 775.0) Encodes the alpha-subunit of the glutamate dehydrogenase. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells.; glutamate dehydrogenase 2 (GDH2); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), NAD(P)-binding domain (InterPro:IPR016040), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 3 (TAIR:AT3G03910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37461 : 507.0) no description available & (gnl|cdd|30682 : 468.0) no description available & (reliability: 1550.0) & (original description: Putative GDHA, Description = Glutamate dehydrogenase A, PFAM = PF00208;PF02812)' T '12.3.1' 'N-metabolism.N-degradation.glutamate dehydrogenase' 'niben101scf12318_91655-98448' '(q9lec8|dheb_nicpl : 788.0) Glutamate dehydrogenase B (EC 1.4.1.3) (GDH B) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g18170 : 764.0) Encodes the 43 kDa alpha-subunit of the glutamate dehydrogenase with a putative mitochondrial transit polypeptide and NAD(H)- and alpha-ketoglutarate-binding domains. Mitochondrial localization confirmed by subcellular fractionation. Combines in several ratios with GDH2 protein (GDH-beta) to form seven isoenzymes. Catalyzes the cleavage of glycine residues. May be involved in ammonia assimilation under conditions of inorganic nitrogen excess. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells.; glutamate dehydrogenase 1 (GDH1); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cadmium ion, response to salt stress, nitrogen compound metabolic process, response to absence of light; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), NAD(P)-binding domain (InterPro:IPR016040), Glutamate dehydrogenase (InterPro:IPR014362), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 3 (TAIR:AT3G03910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37461 : 516.0) no description available & (gnl|cdd|30682 : 453.0) no description available & (reliability: 1528.0) & (original description: Putative GDHB, Description = Glutamate dehydrogenase B, PFAM = PF02812;PF00208)' T '12.4' 'N-metabolism.misc' 'nbv0.3scaffold37582_15291-20639' '(at5g67220 : 580.0) FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity; INVOLVED IN: regulation of nitrogen utilization, oxidation reduction, tRNA processing, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269), tRNA-dihydrouridine synthase, conserved site (InterPro:IPR018517); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G49640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37546 : 406.0) no description available & (gnl|cdd|73368 : 282.0) no description available & (reliability: 1160.0) & (original description: Putative DUS1L, Description = tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like, PFAM = PF01207)' T '12.4' 'N-metabolism.misc' 'niben044scf00038372ctg000_2284-6800' '(at3g49645 : 125.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative At3g49645, Description = Putative uncharacterized protein T9C5.230, PFAM = )' T '12.4' 'N-metabolism.misc' 'niben101scf00682_427137-432554' '(at3g49645 : 172.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative At3g49645, Description = , PFAM = )' T '12.4' 'N-metabolism.misc' 'niben101scf01692_674993-680344' '(at5g67220 : 577.0) FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity; INVOLVED IN: regulation of nitrogen utilization, oxidation reduction, tRNA processing, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269), tRNA-dihydrouridine synthase, conserved site (InterPro:IPR018517); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G49640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37546 : 404.0) no description available & (gnl|cdd|73368 : 283.0) no description available & (reliability: 1154.0) & (original description: Putative DUS1L, Description = tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like, PFAM = PF01207)' T '12.4' 'N-metabolism.misc' 'niben101scf03264_484513-498698' '(at3g63510 : 575.0) FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity; INVOLVED IN: regulation of nitrogen utilization, tRNA processing, oxidation reduction, metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT5G47970.2); Has 11664 Blast hits to 11660 proteins in 2553 species: Archae - 58; Bacteria - 8007; Metazoa - 234; Fungi - 152; Plants - 146; Viruses - 0; Other Eukaryotes - 3067 (source: NCBI BLink). & (gnl|cdd|83990 : 352.0) no description available & (gnl|cdd|37546 : 310.0) no description available & (reliability: 1126.0) & (original description: Putative dusA, Description = tRNA-dihydrouridine(20/20a) synthase, PFAM = PF01207)' T '12.4' 'N-metabolism.misc' 'niben101scf04703_864695-871466' '(at1g02020 : 779.0) nitroreductase family protein; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, nitrogenous group as acceptor, oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitroreductase-like (InterPro:IPR000415); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|48388 : 110.0) no description available & (reliability: 1558.0) & (original description: Putative amb0269, Description = Nitroreductase, PFAM = PF00881)' T '12.4' 'N-metabolism.misc' 'niben101scf04875_745940-750974' '(at3g49645 : 147.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative At3g49645, Description = Putative uncharacterized protein T9C5.230, PFAM = )' T '12.4' 'N-metabolism.misc' 'niben101scf05552_837487-840055' '(at1g21840 : 323.0) Encodes a urease accessory protein which is essential for the activation of plant urease.; urease accessory protein F (UREF); FUNCTIONS IN: nickel ion binding; INVOLVED IN: nitrogen compound metabolic process, positive regulation of metalloenzyme activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Urease accessory protein UreF (InterPro:IPR002639); Has 962 Blast hits to 961 proteins in 436 species: Archae - 16; Bacteria - 785; Metazoa - 9; Fungi - 76; Plants - 41; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|31172 : 112.0) no description available & (reliability: 646.0) & (original description: Putative ureF, Description = Putative urease accessory protein F, PFAM = PF01730)' T '12.4' 'N-metabolism.misc' 'niben101scf11657_231737-239458' '(at3g63510 : 423.0) FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity; INVOLVED IN: regulation of nitrogen utilization, tRNA processing, oxidation reduction, metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT5G47970.2); Has 11664 Blast hits to 11660 proteins in 2553 species: Archae - 58; Bacteria - 8007; Metazoa - 234; Fungi - 152; Plants - 146; Viruses - 0; Other Eukaryotes - 3067 (source: NCBI BLink). & (gnl|cdd|83990 : 302.0) no description available & (gnl|cdd|37546 : 261.0) no description available & (reliability: 834.0) & (original description: Putative dusA, Description = tRNA dihydrouridine synthase A, PFAM = PF01207)' T '12.4' 'N-metabolism.misc' 'niben101scf21301_27363-31281' '(at3g49640 : 98.6) Aldolase-type TIM barrel family protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity; INVOLVED IN: regulation of nitrogen utilization, oxidation reduction, tRNA processing, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269), tRNA-dihydrouridine synthase, conserved site (InterPro:IPR018517); BEST Arabidopsis thaliana protein match is: FMN-linked oxidoreductases superfamily protein (TAIR:AT5G67220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37545 : 81.2) no description available & (reliability: 197.2) & (original description: Putative dus2, Description = tRNA-dihydrouridine synthase, PFAM = )' T '12.4' 'N-metabolism.misc' 'niben101scf21301_28645-43532' '(at3g49640 : 501.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity; INVOLVED IN: regulation of nitrogen utilization, oxidation reduction, tRNA processing, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269), tRNA-dihydrouridine synthase, conserved site (InterPro:IPR018517); BEST Arabidopsis thaliana protein match is: FMN-linked oxidoreductases superfamily protein (TAIR:AT5G67220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37545 : 314.0) no description available & (gnl|cdd|73368 : 260.0) no description available & (reliability: 1002.0) & (original description: Putative dus2l, Description = tRNA-dihydrouridine synthase, PFAM = PF01207)' T '13' 'amino acid metabolism' 'niben101scf01863_361464-366565' '(at5g65890 : 486.0) Member of ACT domain containing protein family. ACT domains are amino acid binding domains. Shows strongest expression in flowers and siliques.; ACT domain repeat 1 (ACR1); FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT-like superfamily protein (TAIR:AT5G25320.1); Has 728 Blast hits to 694 proteins in 163 species: Archae - 0; Bacteria - 318; Metazoa - 0; Fungi - 0; Plants - 322; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|80394 : 125.0) no description available & (reliability: 972.0) & (original description: Putative ACR1, Description = ACT domain-containing protein ACR1, PFAM = PF01842)' T '13' 'amino acid metabolism' 'niben101scf02634_17207-26157' '(at5g04740 : 330.0) ACT domain-containing protein; FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: uridylyltransferase-related (TAIR:AT1G16880.1). & (reliability: 660.0) & (original description: Putative ACR12, Description = ACT domain-containing protein ACR12, PFAM = )' T '13' 'amino acid metabolism' 'niben101scf03413_318526-327813' '(at5g04740 : 335.0) ACT domain-containing protein; FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: uridylyltransferase-related (TAIR:AT1G16880.1). & (reliability: 670.0) & (original description: Putative ACR11, Description = DS12 from 2D-PAGE of leaf protein, putative, PFAM = )' T '13' 'amino acid metabolism' 'niben101scf11078_67955-73364' '(at5g25320 : 563.0) ACT-like superfamily protein; FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 3 (TAIR:AT1G76990.5); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80396 : 124.0) no description available & (reliability: 1126.0) & (original description: Putative ACR2, Description = ACT domain-containing protein ACR2, PFAM = PF01842)' T '13.1' 'amino acid metabolism.synthesis' '' '' '13.1.1' 'amino acid metabolism.synthesis.central amino acid metabolism' '' '' '13.1.1.1' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA' '' '' '13.1.1.1.1' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.Glutamate decarboxylase' 'niben101ctg13733_1-2139' '(q07346|dce_pethy : 281.0) Glutamate decarboxylase (EC 4.1.1.15) (GAD) - Petunia hybrida (Petunia) & (at5g17330 : 275.0) Encodes one of two isoforms of glutamate decarboxylase.; glutamate decarboxylase (GAD); FUNCTIONS IN: calmodulin binding, glutamate decarboxylase activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 4 (TAIR:AT2G02010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36597 : 199.0) no description available & (gnl|cdd|84666 : 138.0) no description available & (reliability: 550.0) & (original description: Putative gad, Description = Glutamate decarboxylase, PFAM = PF00282)' T '13.1.1.1.1' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.Glutamate decarboxylase' 'niben101scf00440_156950-160649' '(q07346|dce_pethy : 297.0) Glutamate decarboxylase (EC 4.1.1.15) (GAD) - Petunia hybrida (Petunia) & (at2g02000 : 271.0) glutamate decarboxylase 3 (GAD3); FUNCTIONS IN: calmodulin binding; INVOLVED IN: carboxylic acid metabolic process, glutamate metabolic process, glutamate decarboxylation to succinate; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 4 (TAIR:AT2G02010.1); Has 2817 Blast hits to 2814 proteins in 863 species: Archae - 192; Bacteria - 1666; Metazoa - 146; Fungi - 354; Plants - 282; Viruses - 7; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|36597 : 186.0) no description available & (gnl|cdd|30425 : 93.9) no description available & (reliability: 542.0) & (original description: Putative gad1, Description = Glutamate decarboxylase, PFAM = PF00282)' T '13.1.1.1.1' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.Glutamate decarboxylase' 'niben101scf01241_223069-231863' '(at2g02010 : 880.0) glutamate decarboxylase 4 (GAD4); FUNCTIONS IN: calmodulin binding; INVOLVED IN: carboxylic acid metabolic process, glutamate metabolic process, glutamate decarboxylation to succinate; LOCATED IN: cytosol, nucleus; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 3 (TAIR:AT2G02000.1); Has 2849 Blast hits to 2845 proteins in 876 species: Archae - 190; Bacteria - 1701; Metazoa - 147; Fungi - 354; Plants - 286; Viruses - 3; Other Eukaryotes - 168 (source: NCBI BLink). & (q07346|dce_pethy : 867.0) Glutamate decarboxylase (EC 4.1.1.15) (GAD) - Petunia hybrida (Petunia) & (gnl|cdd|36597 : 593.0) no description available & (gnl|cdd|30425 : 350.0) no description available & (reliability: 1760.0) & (original description: Putative GAD4, Description = Glutamate decarboxylase 4, PFAM = PF00282)' T '13.1.1.1.1' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.Glutamate decarboxylase' 'niben101scf01958_502939-522722' '(q07346|dce_pethy : 879.0) Glutamate decarboxylase (EC 4.1.1.15) (GAD) - Petunia hybrida (Petunia) & (at5g17330 : 867.0) Encodes one of two isoforms of glutamate decarboxylase.; glutamate decarboxylase (GAD); FUNCTIONS IN: calmodulin binding, glutamate decarboxylase activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 4 (TAIR:AT2G02010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36597 : 598.0) no description available & (gnl|cdd|30425 : 363.0) no description available & (reliability: 1734.0) & (original description: Putative GAD, Description = Glutamate decarboxylase, PFAM = PF00282)' T '13.1.1.1.1' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.Glutamate decarboxylase' 'niben101scf02395_310169-322832' '(q07346|dce_pethy : 952.0) Glutamate decarboxylase (EC 4.1.1.15) (GAD) - Petunia hybrida (Petunia) & (at2g02010 : 874.0) glutamate decarboxylase 4 (GAD4); FUNCTIONS IN: calmodulin binding; INVOLVED IN: carboxylic acid metabolic process, glutamate metabolic process, glutamate decarboxylation to succinate; LOCATED IN: cytosol, nucleus; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 3 (TAIR:AT2G02000.1); Has 2849 Blast hits to 2845 proteins in 876 species: Archae - 190; Bacteria - 1701; Metazoa - 147; Fungi - 354; Plants - 286; Viruses - 3; Other Eukaryotes - 168 (source: NCBI BLink). & (gnl|cdd|36597 : 606.0) no description available & (gnl|cdd|30425 : 366.0) no description available & (reliability: 1748.0) & (original description: Putative GAD, Description = Glutamate decarboxylase, PFAM = PF00282)' T '13.1.1.1.1' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.Glutamate decarboxylase' 'niben101scf02698_30431-37217' '(at5g17330 : 751.0) Encodes one of two isoforms of glutamate decarboxylase.; glutamate decarboxylase (GAD); FUNCTIONS IN: calmodulin binding, glutamate decarboxylase activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 4 (TAIR:AT2G02010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q07346|dce_pethy : 751.0) Glutamate decarboxylase (EC 4.1.1.15) (GAD) - Petunia hybrida (Petunia) & (gnl|cdd|36597 : 539.0) no description available & (gnl|cdd|30425 : 357.0) no description available & (reliability: 1502.0) & (original description: Putative gad1, Description = Glutamate decarboxylase, PFAM = PF00282)' T '13.1.1.1.2' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.GABA transaminase' 'nbv0.3scaffold19392_5354-17263' '(at3g22200 : 262.0) Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense.; POLLEN-PISTIL INCOMPATIBILITY 2 (POP2); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1). & (gnl|cdd|81846 : 183.0) no description available & (gnl|cdd|36618 : 158.0) no description available & (reliability: 524.0) & (original description: Putative bioA, Description = Putative aminotransferase y4uB, PFAM = PF00202)' T '13.1.1.1.2' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.GABA transaminase' 'nbv0.5scaffold6379_47807-65378' '(at3g22200 : 765.0) Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense.; POLLEN-PISTIL INCOMPATIBILITY 2 (POP2); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1). & (gnl|cdd|81846 : 612.0) no description available & (gnl|cdd|36618 : 496.0) no description available & (reliability: 1530.0) & (original description: Putative bioA, Description = Aminotransferase, PFAM = PF00202)' T '13.1.1.1.2' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.GABA transaminase' 'nbv0.5scaffold9780_9919-13668' '(at3g22200 : 319.0) Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense.; POLLEN-PISTIL INCOMPATIBILITY 2 (POP2); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1). & (gnl|cdd|81846 : 245.0) no description available & (gnl|cdd|36618 : 188.0) no description available & (reliability: 638.0) & (original description: Putative bioA, Description = Aminotransferase, PFAM = PF00202)' T '13.1.1.1.2' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.GABA transaminase' 'niben044scf00017218ctg030_4333-9672' '(at3g22200 : 179.0) Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense.; POLLEN-PISTIL INCOMPATIBILITY 2 (POP2); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1). & (gnl|cdd|81846 : 101.0) no description available & (gnl|cdd|36618 : 93.0) no description available & (reliability: 358.0) & (original description: Putative pAMT, Description = Putative aminotransferase y4uB, PFAM = PF00202)' T '13.1.1.1.2' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.GABA transaminase' 'niben044scf00031004ctg003_7299-11357' '(at3g22200 : 348.0) Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense.; POLLEN-PISTIL INCOMPATIBILITY 2 (POP2); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1). & (gnl|cdd|81846 : 278.0) no description available & (gnl|cdd|36618 : 203.0) no description available & (reliability: 696.0) & (original description: Putative bioA, Description = Aminotransferase, PFAM = PF00202)' T '13.1.1.1.2' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.GABA transaminase' 'niben101scf02437_12665-32742' '(at3g22200 : 718.0) Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense.; POLLEN-PISTIL INCOMPATIBILITY 2 (POP2); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1). & (gnl|cdd|81846 : 587.0) no description available & (gnl|cdd|36618 : 462.0) no description available & (reliability: 1436.0) & (original description: Putative bioA, Description = Aminotransferase, PFAM = PF00202)' T '13.1.1.1.2' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.GABA transaminase' 'niben101scf02807_1176922-1185246' '(at3g22200 : 825.0) Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense.; POLLEN-PISTIL INCOMPATIBILITY 2 (POP2); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1). & (gnl|cdd|81846 : 625.0) no description available & (gnl|cdd|36618 : 510.0) no description available & (reliability: 1650.0) & (original description: Putative bioA, Description = Aminotransferase, PFAM = PF00202)' T '13.1.1.1.2' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.GABA transaminase' 'niben101scf04464_157654-163786' '(at3g22200 : 576.0) Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense.; POLLEN-PISTIL INCOMPATIBILITY 2 (POP2); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1). & (gnl|cdd|81846 : 467.0) no description available & (gnl|cdd|36618 : 366.0) no description available & (reliability: 1152.0) & (original description: Putative bioA, Description = Aminotransferase, PFAM = PF00202)' T '13.1.1.1.2' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.GABA transaminase' 'niben101scf06933_274284-283600' '(at3g22200 : 752.0) Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense.; POLLEN-PISTIL INCOMPATIBILITY 2 (POP2); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1). & (gnl|cdd|81846 : 590.0) no description available & (gnl|cdd|36618 : 458.0) no description available & (p45621|gsa_soybn : 87.0) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Glycine max (Soybean) & (reliability: 1504.0) & (original description: Putative pAMT, Description = Putative aminotransferase, PFAM = PF00202)' T '13.1.1.1.2' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.GABA transaminase' 'niben101scf12662_58744-69387' '(at3g22200 : 783.0) Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense.; POLLEN-PISTIL INCOMPATIBILITY 2 (POP2); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1). & (gnl|cdd|81846 : 630.0) no description available & (gnl|cdd|36618 : 512.0) no description available & (reliability: 1566.0) & (original description: Putative bioA, Description = Aminotransferase, PFAM = PF00202)' T '13.1.1.1.3' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.SSADH' '' '' '13.1.1.1.4' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.gamma-hydroxybutyrate DH' 'nbv0.3scaffold64610_5949-9520' '(at1g17650 : 243.0) Glyoxylate reductase located in chloroplasts.; glyoxylate reductase 2 (GLYR2); FUNCTIONS IN: phosphogluconate dehydrogenase (decarboxylating) activity, glyoxylate reductase (NADP) activity; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: glyoxylate reductase 1 (TAIR:AT3G25530.1); Has 16115 Blast hits to 16085 proteins in 2099 species: Archae - 147; Bacteria - 9815; Metazoa - 317; Fungi - 434; Plants - 311; Viruses - 1; Other Eukaryotes - 5090 (source: NCBI BLink). & (gnl|cdd|35630 : 158.0) no description available & (gnl|cdd|32267 : 131.0) no description available & (reliability: 486.0) & (original description: Putative ghr, Description = Putative oxidoreductase GLYR1, PFAM = PF14833)' T '13.1.1.1.4' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.gamma-hydroxybutyrate DH' 'niben101scf02078_933356-940786' '(at1g17650 : 448.0) Glyoxylate reductase located in chloroplasts.; glyoxylate reductase 2 (GLYR2); FUNCTIONS IN: phosphogluconate dehydrogenase (decarboxylating) activity, glyoxylate reductase (NADP) activity; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: glyoxylate reductase 1 (TAIR:AT3G25530.1); Has 16115 Blast hits to 16085 proteins in 2099 species: Archae - 147; Bacteria - 9815; Metazoa - 317; Fungi - 434; Plants - 311; Viruses - 1; Other Eukaryotes - 5090 (source: NCBI BLink). & (gnl|cdd|35630 : 291.0) no description available & (gnl|cdd|32267 : 252.0) no description available & (reliability: 896.0) & (original description: Putative GLYR2, Description = Glyoxylate/succinic semialdehyde reductase 2, chloroplastic, PFAM = PF14833;PF03446)' T '13.1.1.1.4' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.gamma-hydroxybutyrate DH' 'niben101scf02831_577726-584802' '(at1g17650 : 448.0) Glyoxylate reductase located in chloroplasts.; glyoxylate reductase 2 (GLYR2); FUNCTIONS IN: phosphogluconate dehydrogenase (decarboxylating) activity, glyoxylate reductase (NADP) activity; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: glyoxylate reductase 1 (TAIR:AT3G25530.1); Has 16115 Blast hits to 16085 proteins in 2099 species: Archae - 147; Bacteria - 9815; Metazoa - 317; Fungi - 434; Plants - 311; Viruses - 1; Other Eukaryotes - 5090 (source: NCBI BLink). & (gnl|cdd|35630 : 305.0) no description available & (gnl|cdd|32267 : 265.0) no description available & (reliability: 896.0) & (original description: Putative GLYR2, Description = Glyoxylate/succinic semialdehyde reductase 2, chloroplastic, PFAM = PF14833;PF03446)' T '13.1.1.2' 'amino acid metabolism.synthesis.central amino acid metabolism.aspartate' '' '' '13.1.1.2.1' 'amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase' 'niben044scf00031050ctg000_124-6409' '(at4g31990 : 716.0) Encodes a plastid-localized aspartate aminotransferase. Does not display any PAT (glutamate/aspartate-prephenate aminotransferase) activity even in the presence of a high concentration of prephenate.; aspartate aminotransferase 5 (ASP5); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 3 (TAIR:AT5G11520.1). & (gnl|cdd|36625 : 534.0) no description available & (gnl|cdd|82888 : 473.0) no description available & (p37833|aatc_orysa : 448.0) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1) (Transaminase A) - Oryza sativa (Rice) & (reliability: 1432.0) & (original description: Putative ASP5, Description = Aspartate aminotransferase, chloroplastic, PFAM = PF00155;PF00155)' T '13.1.1.2.1' 'amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase' 'niben101scf03164_690549-696733' '(p28734|aatc_dauca : 737.0) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1) (Transaminase A) - Daucus carota (Carrot) & (at5g11520 : 717.0) Encodes the chloroplastic isozyme of aspartate aminotransferase. Involved in aspartate biosynthesis and nitrogen metabolism. mRNA is expressed in senescing leaves.; aspartate aminotransferase 3 (ASP3); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity; INVOLVED IN: leaf senescence, nitrogen compound metabolic process; LOCATED IN: peroxisome, plastid, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 2 (TAIR:AT5G19550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36625 : 635.0) no description available & (gnl|cdd|82888 : 525.0) no description available & (reliability: 1434.0) & (original description: Putative got2, Description = Aspartate aminotransferase, PFAM = PF00155)' T '13.1.1.2.1' 'amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase' 'niben101scf04437_15362-22221' '(at4g31990 : 751.0) Encodes a plastid-localized aspartate aminotransferase. Does not display any PAT (glutamate/aspartate-prephenate aminotransferase) activity even in the presence of a high concentration of prephenate.; aspartate aminotransferase 5 (ASP5); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 3 (TAIR:AT5G11520.1). & (gnl|cdd|36625 : 584.0) no description available & (gnl|cdd|82888 : 522.0) no description available & (p37833|aatc_orysa : 469.0) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1) (Transaminase A) - Oryza sativa (Rice) & (reliability: 1502.0) & (original description: Putative ASP5, Description = Aspartate aminotransferase, chloroplastic, PFAM = PF00155)' T '13.1.1.2.1' 'amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase' 'niben101scf06016_199027-207265' '(at2g22250 : 613.0) Encodes a prokaryotic-type plastidic aspartate aminotransferase with glutamate/aspartate-prephenate aminotransferase (PAT) activity.; aspartate aminotransferase (AAT); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G77670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81751 : 414.0) no description available & (gnl|cdd|35478 : 383.0) no description available & (reliability: 1226.0) & (original description: Putative aatA, Description = Aspartate aminotransferase, PFAM = PF00155)' T '13.1.1.2.1' 'amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase' 'niben101scf07926_549862-560703' '(at4g31990 : 774.0) Encodes a plastid-localized aspartate aminotransferase. Does not display any PAT (glutamate/aspartate-prephenate aminotransferase) activity even in the presence of a high concentration of prephenate.; aspartate aminotransferase 5 (ASP5); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 3 (TAIR:AT5G11520.1). & (gnl|cdd|36625 : 576.0) no description available & (gnl|cdd|82888 : 515.0) no description available & (p37833|aatc_orysa : 480.0) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1) (Transaminase A) - Oryza sativa (Rice) & (reliability: 1548.0) & (original description: Putative aspartate aminotransferase 2, Description = Aspartate aminotransferase 2, PFAM = PF00155)' T '13.1.1.2.1' 'amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase' 'niben101scf09082_44214-50934' '(at2g30970 : 747.0) ASPARTATE AMINOTRANSFERASE 1; aspartate aminotransferase 1 (ASP1); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity, copper ion binding; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 2 (TAIR:AT5G19550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36625 : 609.0) no description available & (gnl|cdd|31637 : 492.0) no description available & (p28011|aat1_medsa : 424.0) Aspartate aminotransferase 1 (EC 2.6.1.1) (Transaminase A) - Medicago sativa (Alfalfa) & (reliability: 1494.0) & (original description: Putative ASP1, Description = Aspartate aminotransferase, mitochondrial, PFAM = PF00155)' T '13.1.1.2.1' 'amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase' 'niben101scf09832_39857-49168' '(at5g11520 : 740.0) Encodes the chloroplastic isozyme of aspartate aminotransferase. Involved in aspartate biosynthesis and nitrogen metabolism. mRNA is expressed in senescing leaves.; aspartate aminotransferase 3 (ASP3); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity; INVOLVED IN: leaf senescence, nitrogen compound metabolic process; LOCATED IN: peroxisome, plastid, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 2 (TAIR:AT5G19550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p37833|aatc_orysa : 717.0) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1) (Transaminase A) - Oryza sativa (Rice) & (gnl|cdd|36625 : 633.0) no description available & (gnl|cdd|82888 : 521.0) no description available & (reliability: 1480.0) & (original description: Putative ASP3, Description = Aspartate aminotransferase 3, chloroplastic, PFAM = PF00155)' T '13.1.1.2.1' 'amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase' 'niben101scf09997_45813-52475' '(p28734|aatc_dauca : 707.0) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1) (Transaminase A) - Daucus carota (Carrot) & (at5g11520 : 691.0) Encodes the chloroplastic isozyme of aspartate aminotransferase. Involved in aspartate biosynthesis and nitrogen metabolism. mRNA is expressed in senescing leaves.; aspartate aminotransferase 3 (ASP3); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity; INVOLVED IN: leaf senescence, nitrogen compound metabolic process; LOCATED IN: peroxisome, plastid, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 2 (TAIR:AT5G19550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36625 : 635.0) no description available & (gnl|cdd|82888 : 527.0) no description available & (reliability: 1382.0) & (original description: Putative aatA, Description = Aspartate aminotransferase, PFAM = PF00155)' T '13.1.1.2.1' 'amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase' 'niben101scf13777_713-7774' '(at2g22250 : 577.0) Encodes a prokaryotic-type plastidic aspartate aminotransferase with glutamate/aspartate-prephenate aminotransferase (PAT) activity.; aspartate aminotransferase (AAT); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G77670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81751 : 410.0) no description available & (gnl|cdd|35478 : 380.0) no description available & (reliability: 1154.0) & (original description: Putative aatA, Description = Aspartate aminotransferase, PFAM = PF00155)' T '13.1.1.2.1001' 'amino acid metabolism.synthesis.central amino acid metabolism.aspartate' 'aspartate' 'amino acid synthesis.homoserine; amino acid synthesis.lysine; amino acid synthesis.arginine; amino acid degradation.arginine; amino acid synthesis.asparagines; amino acid degradation.asparagines; amino acid synthesis.aspartate; amino acid degradation.aspartate; amino acid synthesis.glutamate; amino acid degradation.glutamate; Co-factor metabolism; nucleotide metabolism.synthesis' M '13.1.1.3' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine' '' '' '13.1.1.3.1' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase' 'nbv0.3scaffold72518_571-8236' '(at1g17290 : 791.0) Encodes for alanine aminotransferase (ALAAT1), involved in alanine catabolism during plants recovery from hypoxia; alanine aminotransferas (AlaAT1); FUNCTIONS IN: L-alanine:2-oxoglutarate aminotransferase activity, ATP binding; INVOLVED IN: response to cadmium ion, response to hypoxia, L-alanine catabolic process, by transamination; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: alanine aminotransferase 2 (TAIR:AT1G72330.1); Has 28241 Blast hits to 28232 proteins in 2888 species: Archae - 752; Bacteria - 19527; Metazoa - 637; Fungi - 692; Plants - 1303; Viruses - 0; Other Eukaryotes - 5330 (source: NCBI BLink). & (p52894|ala2_horvu : 716.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|35479 : 639.0) no description available & (gnl|cdd|30785 : 207.0) no description available & (reliability: 1582.0) & (original description: Putative alt, Description = Alanine transaminase, PFAM = PF00155)' T '13.1.1.3.1' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase' 'nbv0.5scaffold320_916490-924169' '(at1g17290 : 816.0) Encodes for alanine aminotransferase (ALAAT1), involved in alanine catabolism during plants recovery from hypoxia; alanine aminotransferas (AlaAT1); FUNCTIONS IN: L-alanine:2-oxoglutarate aminotransferase activity, ATP binding; INVOLVED IN: response to cadmium ion, response to hypoxia, L-alanine catabolic process, by transamination; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: alanine aminotransferase 2 (TAIR:AT1G72330.1); Has 28241 Blast hits to 28232 proteins in 2888 species: Archae - 752; Bacteria - 19527; Metazoa - 637; Fungi - 692; Plants - 1303; Viruses - 0; Other Eukaryotes - 5330 (source: NCBI BLink). & (p52894|ala2_horvu : 748.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|35479 : 662.0) no description available & (gnl|cdd|30785 : 208.0) no description available & (reliability: 1632.0) & (original description: Putative alt, Description = Alanine transaminase, PFAM = PF00155)' T '13.1.1.3.1' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase' 'niben044scf00001174ctg009_2610-10374' '(at1g72330 : 795.0) Encodes for alanine aminotransferase ALAAT2.; alanine aminotransferase 2 (ALAAT2); FUNCTIONS IN: copper ion binding, L-alanine:2-oxoglutarate aminotransferase activity; INVOLVED IN: biosynthetic process; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: alanine aminotransferas (TAIR:AT1G17290.1). & (p52894|ala2_horvu : 722.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|35479 : 643.0) no description available & (gnl|cdd|30785 : 210.0) no description available & (reliability: 1590.0) & (original description: Putative ALAAT2, Description = Alanine aminotransferase 2, mitochondrial, PFAM = PF00155)' T '13.1.1.3.1' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase' 'niben101scf00747_1094310-1101882' '(at1g72330 : 818.0) Encodes for alanine aminotransferase ALAAT2.; alanine aminotransferase 2 (ALAAT2); FUNCTIONS IN: copper ion binding, L-alanine:2-oxoglutarate aminotransferase activity; INVOLVED IN: biosynthetic process; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: alanine aminotransferas (TAIR:AT1G17290.1). & (p52894|ala2_horvu : 750.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|35479 : 663.0) no description available & (gnl|cdd|30785 : 208.0) no description available & (reliability: 1636.0) & (original description: Putative alt, Description = Alanine transaminase, PFAM = PF00155)' T '13.1.1.3.1' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase' 'niben101scf00870_332531-339972' '(at1g72330 : 822.0) Encodes for alanine aminotransferase ALAAT2.; alanine aminotransferase 2 (ALAAT2); FUNCTIONS IN: copper ion binding, L-alanine:2-oxoglutarate aminotransferase activity; INVOLVED IN: biosynthetic process; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: alanine aminotransferas (TAIR:AT1G17290.1). & (p52894|ala2_horvu : 754.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|35479 : 666.0) no description available & (gnl|cdd|30785 : 211.0) no description available & (reliability: 1644.0) & (original description: Putative ALAAT2, Description = Alanine aminotransferase 2, mitochondrial, PFAM = PF00155)' T '13.1.1.3.1' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase' 'niben101scf01917_1321680-1328123' '(at1g70580 : 863.0) Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro.; alanine-2-oxoglutarate aminotransferase 2 (AOAT2); FUNCTIONS IN: glycine:2-oxoglutarate aminotransferase activity, L-alanine:2-oxoglutarate aminotransferase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: glutamate:glyoxylate aminotransferase (TAIR:AT1G23310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35479 : 695.0) no description available & (p52894|ala2_horvu : 488.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|82896 : 191.0) no description available & (reliability: 1726.0) & (original description: Putative GGAT2, Description = Glutamate--glyoxylate aminotransferase 2, PFAM = PF00155)' T '13.1.1.3.1' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase' 'niben101scf02937_428544-438037' '(at1g70580 : 887.0) Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro.; alanine-2-oxoglutarate aminotransferase 2 (AOAT2); FUNCTIONS IN: glycine:2-oxoglutarate aminotransferase activity, L-alanine:2-oxoglutarate aminotransferase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: glutamate:glyoxylate aminotransferase (TAIR:AT1G23310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35479 : 712.0) no description available & (p52894|ala2_horvu : 507.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|30785 : 188.0) no description available & (reliability: 1774.0) & (original description: Putative GGAT2, Description = Glutamate--glyoxylate aminotransferase 2, PFAM = PF00155)' T '13.1.1.3.1' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase' 'niben101scf03823_183628-249135' '(at1g72330 : 840.0) Encodes for alanine aminotransferase ALAAT2.; alanine aminotransferase 2 (ALAAT2); FUNCTIONS IN: copper ion binding, L-alanine:2-oxoglutarate aminotransferase activity; INVOLVED IN: biosynthetic process; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: alanine aminotransferas (TAIR:AT1G17290.1). & (p52894|ala2_horvu : 761.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|35479 : 674.0) no description available & (gnl|cdd|30785 : 215.0) no description available & (reliability: 1680.0) & (original description: Putative ALAAT2, Description = Alanine aminotransferase 2, mitochondrial, PFAM = PF00155)' T '13.1.1.3.1' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase' 'niben101scf10162_21719-29222' '(at1g70580 : 882.0) Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro.; alanine-2-oxoglutarate aminotransferase 2 (AOAT2); FUNCTIONS IN: glycine:2-oxoglutarate aminotransferase activity, L-alanine:2-oxoglutarate aminotransferase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: glutamate:glyoxylate aminotransferase (TAIR:AT1G23310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35479 : 711.0) no description available & (p52894|ala2_horvu : 510.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|30785 : 189.0) no description available & (reliability: 1764.0) & (original description: Putative gpt, Description = Probable alanine aminotransferase, mitochondrial, PFAM = PF00155)' T '13.1.1.3.11' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine-glyoxylate aminotransferase' 'nbv0.3scaffold61045_438-11344' '(at3g08860 : 756.0) Encodes a protein that is predicted to have beta-alanine aminotransferase activity.; PYRIMIDINE 4 (PYD4); FUNCTIONS IN: pyridoxal phosphate binding, transaminase activity, catalytic activity, alanine-glyoxylate transaminase activity; INVOLVED IN: cellular response to nitrogen levels; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: alanine:glyoxylate aminotransferase 3 (TAIR:AT2G38400.1); Has 35951 Blast hits to 35930 proteins in 2736 species: Archae - 736; Bacteria - 23081; Metazoa - 661; Fungi - 840; Plants - 399; Viruses - 17; Other Eukaryotes - 10217 (source: NCBI BLink). & (gnl|cdd|36618 : 620.0) no description available & (gnl|cdd|30509 : 435.0) no description available & (q6yze2|gsa_orysa : 85.1) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Oryza sativa (Rice) & (reliability: 1484.0) & (original description: Putative agxt2, Description = Alanine--glyoxylate aminotransferase 2, mitochondrial, PFAM = PF00202)' T '13.1.1.3.11' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine-glyoxylate aminotransferase' 'niben044scf00020016ctg002_13221-27037' '(at4g39660 : 814.0) alanine:glyoxylate aminotransferase 2 homolog (AGT2) mRNA,; alanine:glyoxylate aminotransferase 2 (AGT2); FUNCTIONS IN: zinc ion binding, alanine-glyoxylate transaminase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: PYRIMIDINE 4 (TAIR:AT3G08860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36618 : 615.0) no description available & (gnl|cdd|75392 : 426.0) no description available & (q6yze2|gsa_orysa : 89.7) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Oryza sativa (Rice) & (reliability: 1628.0) & (original description: Putative AGT2, Description = Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial, PFAM = PF00202)' T '13.1.1.3.11' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine-glyoxylate aminotransferase' 'niben101scf00797_1849693-1855908' '(at2g13360 : 728.0) Encodes a peroxisomal photorespiratory enzyme that catalyzes transamination reactions with multiple substrates. It is involved in photorespiration.; alanine:glyoxylate aminotransferase (AGT); FUNCTIONS IN: serine-pyruvate transaminase activity, serine-glyoxylate transaminase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: apoplast, peroxisome, plasma membrane, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Aminotransferase class-V pyridoxal-phosphate binding site (InterPro:IPR020578), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); Has 6407 Blast hits to 6405 proteins in 1610 species: Archae - 309; Bacteria - 3905; Metazoa - 186; Fungi - 125; Plants - 148; Viruses - 0; Other Eukaryotes - 1734 (source: NCBI BLink). & (gnl|cdd|38073 : 463.0) no description available & (gnl|cdd|30424 : 379.0) no description available & (p84187|sgat_maize : 102.0) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT) (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) (Fragments) - Zea mays (Maize) & (reliability: 1456.0) & (original description: Putative AGT1, Description = Serine--glyoxylate aminotransferase, PFAM = PF00266)' T '13.1.1.3.11' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine-glyoxylate aminotransferase' 'niben101scf04011_42544-49949' '(at4g39660 : 789.0) alanine:glyoxylate aminotransferase 2 homolog (AGT2) mRNA,; alanine:glyoxylate aminotransferase 2 (AGT2); FUNCTIONS IN: zinc ion binding, alanine-glyoxylate transaminase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: PYRIMIDINE 4 (TAIR:AT3G08860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36618 : 623.0) no description available & (gnl|cdd|75392 : 428.0) no description available & (q6yze2|gsa_orysa : 91.3) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Oryza sativa (Rice) & (reliability: 1578.0) & (original description: Putative AGT2, Description = Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial, PFAM = PF00202)' T '13.1.1.3.11' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine-glyoxylate aminotransferase' 'niben101scf07123_1335-5945' '(at2g13360 : 656.0) Encodes a peroxisomal photorespiratory enzyme that catalyzes transamination reactions with multiple substrates. It is involved in photorespiration.; alanine:glyoxylate aminotransferase (AGT); FUNCTIONS IN: serine-pyruvate transaminase activity, serine-glyoxylate transaminase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: apoplast, peroxisome, plasma membrane, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Aminotransferase class-V pyridoxal-phosphate binding site (InterPro:IPR020578), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); Has 6407 Blast hits to 6405 proteins in 1610 species: Archae - 309; Bacteria - 3905; Metazoa - 186; Fungi - 125; Plants - 148; Viruses - 0; Other Eukaryotes - 1734 (source: NCBI BLink). & (gnl|cdd|38073 : 457.0) no description available & (gnl|cdd|30424 : 355.0) no description available & (p84187|sgat_maize : 100.0) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT) (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) (Fragments) - Zea mays (Maize) & (reliability: 1312.0) & (original description: Putative AGT1, Description = Serine--glyoxylate aminotransferase, PFAM = PF00266)' T '13.1.1.3.11' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine-glyoxylate aminotransferase' 'niben101scf12528_15590-23004' '(at3g08860 : 752.0) Encodes a protein that is predicted to have beta-alanine aminotransferase activity.; PYRIMIDINE 4 (PYD4); FUNCTIONS IN: pyridoxal phosphate binding, transaminase activity, catalytic activity, alanine-glyoxylate transaminase activity; INVOLVED IN: cellular response to nitrogen levels; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: alanine:glyoxylate aminotransferase 3 (TAIR:AT2G38400.1); Has 35951 Blast hits to 35930 proteins in 2736 species: Archae - 736; Bacteria - 23081; Metazoa - 661; Fungi - 840; Plants - 399; Viruses - 17; Other Eukaryotes - 10217 (source: NCBI BLink). & (gnl|cdd|36618 : 623.0) no description available & (gnl|cdd|30509 : 432.0) no description available & (q39566|gsa_chlre : 84.3) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Chlamydomonas reinhardtii & (reliability: 1484.0) & (original description: Putative agxt2, Description = Alanine--glyoxylate aminotransferase 2, mitochondrial, PFAM = PF00202)' T '13.1.1.3.10001' 'amino acid synthesis.alanine' 'alanine' 'amino acid synthesis.alanine; amino acid degradation.alanine; amino acid degradation.tryptophan; Co-factor metabolism; fermentation' M '13.1.2' 'amino acid metabolism.synthesis.glutamate family' '' '' '13.1.2.1' 'amino acid metabolism.synthesis.glutamate family.glutamine' '' '' '13.1.2.2' 'amino acid metabolism.synthesis.glutamate family.proline' '' '' '13.1.2.2.1' 'amino acid metabolism.synthesis.glutamate family.proline.delta 1-pyrroline-5-carboxylate synthetase' 'nbv0.3scaffold50960_1-6376' '(o04015|p5cs_actch : 400.0) Delta 1-pyrroline-5-carboxylate synthetase (P5CS) [Includes: Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK); Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma- & (at3g55610 : 392.0) encodes delta 1-pyrroline-5-carboxylate synthetase B. Gene expression is induced by dehydration, high salt and ABA. Knock-out mutations in P5CS2 are embryo-lethal. P5CS2 appears to be present in different cells and/or different subcellular locations from P5CS1 in a tissue-dependent manner.; delta 1-pyrroline-5-carboxylate synthase 2 (P5CS2); FUNCTIONS IN: oxidoreductase activity, catalytic activity, glutamate 5-kinase activity; INVOLVED IN: hyperosmotic salinity response, proline biosynthetic process, response to abscisic acid stimulus, embryo development ending in seed dormancy; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glutamate 5-kinase (InterPro:IPR001057), Glutamate 5-kinase, conserved site (InterPro:IPR019797), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, C-terminal (InterPro:IPR016163), Delta l-pyrroline-5-carboxylate synthetase (InterPro:IPR005766), Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Glutamate 5-kinase, ProB-related (InterPro:IPR005715); BEST Arabidopsis thaliana protein match is: delta1-pyrroline-5-carboxylate synthase 1 (TAIR:AT2G39800.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39367 : 352.0) no description available & (gnl|cdd|30364 : 236.0) no description available & (reliability: 784.0) & (original description: Putative p5cs, Description = Delta-1-pyrroline-5-carboxylate synthase, PFAM = )' T '13.1.2.2.1' 'amino acid metabolism.synthesis.glutamate family.proline.delta 1-pyrroline-5-carboxylate synthetase' 'nbv0.3scaffold84018_677-6422' '(gnl|cdd|58622 : 386.0) no description available & (o04015|p5cs_actch : 362.0) Delta 1-pyrroline-5-carboxylate synthetase (P5CS) [Includes: Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK); Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma- & (gnl|cdd|36369 : 332.0) no description available & (at2g39800 : 326.0) delta1-pyrroline-5-carboxylate synthase 1 (P5CS1); CONTAINS InterPro DOMAIN/s: Glutamate 5-kinase (InterPro:IPR001057), Glutamate 5-kinase, conserved site (InterPro:IPR019797), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Gamma-glutamyl phosphate reductase GPR, conserved site (InterPro:IPR020593), Aldehyde dehydrogenase, C-terminal (InterPro:IPR016163), Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Delta l-pyrroline-5-carboxylate synthetase (InterPro:IPR005766), Gamma-glutamyl phosphate reductase GPR (InterPro:IPR000965), Aldehyde dehydrogenase (InterPro:IPR015590), Glutamate 5-kinase, ProB-related (InterPro:IPR005715); BEST Arabidopsis thaliana protein match is: delta 1-pyrroline-5-carboxylate synthase 2 (TAIR:AT3G55610.1). & (reliability: 652.0) & (original description: Putative proB, Description = Glutamate 5-kinase, PFAM = PF00696)' T '13.1.2.2.1' 'amino acid metabolism.synthesis.glutamate family.proline.delta 1-pyrroline-5-carboxylate synthetase' 'nbv0.5scaffold107_1327446-1338681' '(o04015|p5cs_actch : 1061.0) Delta 1-pyrroline-5-carboxylate synthetase (P5CS) [Includes: Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK); Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma- & (at2g39800 : 976.0) delta1-pyrroline-5-carboxylate synthase 1 (P5CS1); CONTAINS InterPro DOMAIN/s: Glutamate 5-kinase (InterPro:IPR001057), Glutamate 5-kinase, conserved site (InterPro:IPR019797), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Gamma-glutamyl phosphate reductase GPR, conserved site (InterPro:IPR020593), Aldehyde dehydrogenase, C-terminal (InterPro:IPR016163), Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Delta l-pyrroline-5-carboxylate synthetase (InterPro:IPR005766), Gamma-glutamyl phosphate reductase GPR (InterPro:IPR000965), Aldehyde dehydrogenase (InterPro:IPR015590), Glutamate 5-kinase, ProB-related (InterPro:IPR005715); BEST Arabidopsis thaliana protein match is: delta 1-pyrroline-5-carboxylate synthase 2 (TAIR:AT3G55610.1). & (gnl|cdd|39367 : 610.0) no description available & (gnl|cdd|30364 : 440.0) no description available & (reliability: 1952.0) & (original description: Putative PRO2, Description = Delta-1-pyrroline-5-carboxylate synthase, PFAM = PF00696;PF00171)' T '13.1.2.2.1' 'amino acid metabolism.synthesis.glutamate family.proline.delta 1-pyrroline-5-carboxylate synthetase' 'niben101scf03801_34290-51357' '(o04015|p5cs_actch : 253.0) Delta 1-pyrroline-5-carboxylate synthetase (P5CS) [Includes: Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK); Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma- & (at2g39800 : 250.0) delta1-pyrroline-5-carboxylate synthase 1 (P5CS1); CONTAINS InterPro DOMAIN/s: Glutamate 5-kinase (InterPro:IPR001057), Glutamate 5-kinase, conserved site (InterPro:IPR019797), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Gamma-glutamyl phosphate reductase GPR, conserved site (InterPro:IPR020593), Aldehyde dehydrogenase, C-terminal (InterPro:IPR016163), Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Delta l-pyrroline-5-carboxylate synthetase (InterPro:IPR005766), Gamma-glutamyl phosphate reductase GPR (InterPro:IPR000965), Aldehyde dehydrogenase (InterPro:IPR015590), Glutamate 5-kinase, ProB-related (InterPro:IPR005715); BEST Arabidopsis thaliana protein match is: delta 1-pyrroline-5-carboxylate synthase 2 (TAIR:AT3G55610.1). & (gnl|cdd|39367 : 230.0) no description available & (gnl|cdd|30364 : 167.0) no description available & (reliability: 500.0) & (original description: Putative p5cs, Description = Delta-1-pyrroline-5-carboxylate synthase, PFAM = )' T '13.1.2.2.1' 'amino acid metabolism.synthesis.glutamate family.proline.delta 1-pyrroline-5-carboxylate synthetase' 'niben101scf06910_597821-609215' '(o04015|p5cs_actch : 1063.0) Delta 1-pyrroline-5-carboxylate synthetase (P5CS) [Includes: Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK); Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma- & (at2g39800 : 977.0) delta1-pyrroline-5-carboxylate synthase 1 (P5CS1); CONTAINS InterPro DOMAIN/s: Glutamate 5-kinase (InterPro:IPR001057), Glutamate 5-kinase, conserved site (InterPro:IPR019797), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Gamma-glutamyl phosphate reductase GPR, conserved site (InterPro:IPR020593), Aldehyde dehydrogenase, C-terminal (InterPro:IPR016163), Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Delta l-pyrroline-5-carboxylate synthetase (InterPro:IPR005766), Gamma-glutamyl phosphate reductase GPR (InterPro:IPR000965), Aldehyde dehydrogenase (InterPro:IPR015590), Glutamate 5-kinase, ProB-related (InterPro:IPR005715); BEST Arabidopsis thaliana protein match is: delta 1-pyrroline-5-carboxylate synthase 2 (TAIR:AT3G55610.1). & (gnl|cdd|39367 : 613.0) no description available & (gnl|cdd|30364 : 444.0) no description available & (reliability: 1954.0) & (original description: Putative PRO2, Description = Delta-1-pyrroline-5-carboxylate synthase, PFAM = PF00171;PF00696)' T '13.1.2.2.1' 'amino acid metabolism.synthesis.glutamate family.proline.delta 1-pyrroline-5-carboxylate synthetase' 'niben101scf09452_66475-93335' '(o04015|p5cs_actch : 1119.0) Delta 1-pyrroline-5-carboxylate synthetase (P5CS) [Includes: Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK); Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma- & (at2g39800 : 1027.0) delta1-pyrroline-5-carboxylate synthase 1 (P5CS1); CONTAINS InterPro DOMAIN/s: Glutamate 5-kinase (InterPro:IPR001057), Glutamate 5-kinase, conserved site (InterPro:IPR019797), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Gamma-glutamyl phosphate reductase GPR, conserved site (InterPro:IPR020593), Aldehyde dehydrogenase, C-terminal (InterPro:IPR016163), Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Delta l-pyrroline-5-carboxylate synthetase (InterPro:IPR005766), Gamma-glutamyl phosphate reductase GPR (InterPro:IPR000965), Aldehyde dehydrogenase (InterPro:IPR015590), Glutamate 5-kinase, ProB-related (InterPro:IPR005715); BEST Arabidopsis thaliana protein match is: delta 1-pyrroline-5-carboxylate synthase 2 (TAIR:AT3G55610.1). & (gnl|cdd|39367 : 615.0) no description available & (gnl|cdd|30364 : 442.0) no description available & (reliability: 2054.0) & (original description: Putative PRO2, Description = Delta-1-pyrroline-5-carboxylate synthase, PFAM = PF00171;PF00696)' T '13.1.2.2.2' 'amino acid metabolism.synthesis.glutamate family.proline.pyrroline-5-carboxylate reductase' '' '' '13.1.2.2.3' 'amino acid metabolism.synthesis.glutamate family.proline.pyrroline-2-carboxylate reductase' '' '' '13.1.2.2.4' 'amino acid metabolism.synthesis.glutamate family.proline.ornithin-cyclodeaminase' '' '' '13.1.2.2.10' 'amino acid metabolism.synthesis.glutamate family.proline.ornithine aminotransferase' '' '' '13.1.2.2.1001' 'amino acid metabolism.synthesis.glutamate family.proline' 'proline' 'amino acid synthesis.proline; amino acid degradation.proline; stress' M '13.1.2.3' 'amino acid metabolism.synthesis.glutamate family.arginine' '' '' '13.1.2.3.1' 'amino acid metabolism.synthesis.glutamate family.arginine.N-acetyl-L-glutamate 5-phosphotransferase' '' '' '13.1.2.3.2' 'amino acid metabolism.synthesis.glutamate family.arginine.acetylglutamate kinase' 'niben044scf00005802ctg002_5454-16546' '(at2g37500 : 593.0) arginine biosynthesis protein ArgJ family; FUNCTIONS IN: glutamate N-acetyltransferase activity; INVOLVED IN: arginine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arginine biosynthesis protein ArgJ (InterPro:IPR002813), Peptidase S58 DmpA/arginine biosynthesis protein ArgJ (InterPro:IPR016117); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73147 : 477.0) no description available & (gnl|cdd|37997 : 464.0) no description available & (reliability: 1186.0) & (original description: Putative argJ, Description = Arginine biosynthesis bifunctional protein ArgJ, PFAM = PF01960)' T '13.1.2.3.2' 'amino acid metabolism.synthesis.glutamate family.arginine.acetylglutamate kinase' 'niben101scf00582_123023-136369' '(at2g37500 : 605.0) arginine biosynthesis protein ArgJ family; FUNCTIONS IN: glutamate N-acetyltransferase activity; INVOLVED IN: arginine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arginine biosynthesis protein ArgJ (InterPro:IPR002813), Peptidase S58 DmpA/arginine biosynthesis protein ArgJ (InterPro:IPR016117); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73147 : 485.0) no description available & (gnl|cdd|37997 : 474.0) no description available & (reliability: 1210.0) & (original description: Putative argJ, Description = Arginine biosynthesis bifunctional protein ArgJ, PFAM = PF01960)' T '13.1.2.3.3' 'amino acid metabolism.synthesis.glutamate family.arginine.N-Acetylglutamate-5-P reductase' 'nbv0.5scaffold3790_116867-124664' '(at2g19940 : 557.0) oxidoreductases, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;copper ion binding; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, copper ion binding; INVOLVED IN: response to cadmium ion, cellular amino acid metabolic process; LOCATED IN: nucleolus, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Semialdehyde dehydrogenase, dimerisation domain (InterPro:IPR012280), Semialdehyde dehydrogenase, NAD-binding (InterPro:IPR000534), N-acetyl-gamma-glutamyl-phosphate reductase (InterPro:IPR000706); Has 8034 Blast hits to 8033 proteins in 2187 species: Archae - 385; Bacteria - 4804; Metazoa - 0; Fungi - 163; Plants - 77; Viruses - 0; Other Eukaryotes - 2605 (source: NCBI BLink). & (q6av34|argc_orysa : 554.0) Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplast precursor (EC 1.2.1.38) (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) - Oryza sativa (Rice) & (gnl|cdd|80668 : 444.0) no description available & (gnl|cdd|39555 : 352.0) no description available & (reliability: 1114.0) & (original description: Putative argC, Description = AGPR, PFAM = PF02774;PF01118)' T '13.1.2.3.3' 'amino acid metabolism.synthesis.glutamate family.arginine.N-Acetylglutamate-5-P reductase' 'niben044scf00015946ctg004_2853-5487' '(at2g19940 : 139.0) oxidoreductases, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;copper ion binding; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, copper ion binding; INVOLVED IN: response to cadmium ion, cellular amino acid metabolic process; LOCATED IN: nucleolus, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Semialdehyde dehydrogenase, dimerisation domain (InterPro:IPR012280), Semialdehyde dehydrogenase, NAD-binding (InterPro:IPR000534), N-acetyl-gamma-glutamyl-phosphate reductase (InterPro:IPR000706); Has 8034 Blast hits to 8033 proteins in 2187 species: Archae - 385; Bacteria - 4804; Metazoa - 0; Fungi - 163; Plants - 77; Viruses - 0; Other Eukaryotes - 2605 (source: NCBI BLink). & (q6av34|argc_orysa : 138.0) Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplast precursor (EC 1.2.1.38) (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) - Oryza sativa (Rice) & (gnl|cdd|80668 : 124.0) no description available & (gnl|cdd|39555 : 84.3) no description available & (reliability: 278.0) & (original description: Putative argC, Description = AGPR, PFAM = PF01118)' T '13.1.2.3.3' 'amino acid metabolism.synthesis.glutamate family.arginine.N-Acetylglutamate-5-P reductase' 'niben101scf02406_101955-110966' '(at2g19940 : 559.0) oxidoreductases, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;copper ion binding; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, copper ion binding; INVOLVED IN: response to cadmium ion, cellular amino acid metabolic process; LOCATED IN: nucleolus, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Semialdehyde dehydrogenase, dimerisation domain (InterPro:IPR012280), Semialdehyde dehydrogenase, NAD-binding (InterPro:IPR000534), N-acetyl-gamma-glutamyl-phosphate reductase (InterPro:IPR000706); Has 8034 Blast hits to 8033 proteins in 2187 species: Archae - 385; Bacteria - 4804; Metazoa - 0; Fungi - 163; Plants - 77; Viruses - 0; Other Eukaryotes - 2605 (source: NCBI BLink). & (q6av34|argc_orysa : 555.0) Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplast precursor (EC 1.2.1.38) (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) - Oryza sativa (Rice) & (gnl|cdd|80668 : 451.0) no description available & (gnl|cdd|39555 : 354.0) no description available & (reliability: 1118.0) & (original description: Putative argC, Description = AGPR, PFAM = PF02774;PF01118)' T '13.1.2.3.4' 'amino acid metabolism.synthesis.glutamate family.arginine.acetylornithine aminotransferase' 'nbv0.3scaffold19546_28858-34250' '(at1g80600 : 655.0) Encodes HopW1-1-Interacting protein 1 (WIN1). Interacts with the P. syringae effector HopW1-1. WIN1 is a putative acetylornithine transaminase. Modulates plant defenses against bacteria. Three WIN proteins are identified so far (WIN1: AT1G80600; WIN2: AT4G31750; WIN3: AT5G13320).; HOPW1-1-interacting 1 (WIN1); FUNCTIONS IN: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity, copper ion binding; INVOLVED IN: defense response to bacterium; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Acetylornithine/succinylornithine aminotransferase (InterPro:IPR004636), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: ornithine-delta-aminotransferase (TAIR:AT5G46180.1); Has 36928 Blast hits to 36904 proteins in 2775 species: Archae - 735; Bacteria - 23598; Metazoa - 655; Fungi - 914; Plants - 410; Viruses - 17; Other Eukaryotes - 10599 (source: NCBI BLink). & (gnl|cdd|34597 : 483.0) no description available & (gnl|cdd|36615 : 421.0) no description available & (q85wb7|gsa_brana : 121.0) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Brassica napus (Rape) & (reliability: 1310.0) & (original description: Putative AG118, Description = Acetylornithine aminotransferase, mitochondrial, PFAM = PF00202)' T '13.1.2.3.4' 'amino acid metabolism.synthesis.glutamate family.arginine.acetylornithine aminotransferase' 'niben101scf00714_851897-874248' '(at1g80600 : 654.0) Encodes HopW1-1-Interacting protein 1 (WIN1). Interacts with the P. syringae effector HopW1-1. WIN1 is a putative acetylornithine transaminase. Modulates plant defenses against bacteria. Three WIN proteins are identified so far (WIN1: AT1G80600; WIN2: AT4G31750; WIN3: AT5G13320).; HOPW1-1-interacting 1 (WIN1); FUNCTIONS IN: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity, copper ion binding; INVOLVED IN: defense response to bacterium; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Acetylornithine/succinylornithine aminotransferase (InterPro:IPR004636), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: ornithine-delta-aminotransferase (TAIR:AT5G46180.1); Has 36928 Blast hits to 36904 proteins in 2775 species: Archae - 735; Bacteria - 23598; Metazoa - 655; Fungi - 914; Plants - 410; Viruses - 17; Other Eukaryotes - 10599 (source: NCBI BLink). & (gnl|cdd|34597 : 481.0) no description available & (gnl|cdd|36615 : 422.0) no description available & (q85wb7|gsa_brana : 121.0) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Brassica napus (Rape) & (reliability: 1308.0) & (original description: Putative AG118, Description = Acetylornithine aminotransferase, mitochondrial, PFAM = PF00202)' T '13.1.2.3.5' 'amino acid metabolism.synthesis.glutamate family.arginine.N2-Acetylornithine deacetylase' '' '' '13.1.2.3.11' 'amino acid metabolism.synthesis.glutamate family.arginine.carbamoyl-phosphate synthase' '' '' '13.1.2.3.21' 'amino acid metabolism.synthesis.glutamate family.arginine.ornithine carbamoyltransferase' 'niben044scf00016540ctg007_5496-10056' '(q43814|otc_pea : 557.0) Ornithine carbamoyltransferase, chloroplast precursor (EC 2.1.3.3) (OTCase) (Ornithine transcarbamylase) - Pisum sativum (Garden pea) & (at1g75330 : 551.0) ornithine carbamoyltransferase (OTC); FUNCTIONS IN: amino acid binding, ornithine carbamoyltransferase activity, carboxyl- or carbamoyltransferase activity; INVOLVED IN: cellular amino acid metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (InterPro:IPR006132), Aspartate/ornithine carbamoyltransferase (InterPro:IPR006130), Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (InterPro:IPR006131), Ornithine carbamoyltransferase (InterPro:IPR002292); BEST Arabidopsis thaliana protein match is: PYRIMIDINE B (TAIR:AT3G20330.1); Has 16793 Blast hits to 16793 proteins in 2905 species: Archae - 534; Bacteria - 11079; Metazoa - 203; Fungi - 280; Plants - 150; Viruses - 6; Other Eukaryotes - 4541 (source: NCBI BLink). & (gnl|cdd|36717 : 454.0) no description available & (gnl|cdd|30427 : 421.0) no description available & (reliability: 1102.0) & (original description: Putative OTC, Description = Ornithine carbamoyltransferase, chloroplastic, PFAM = PF02729;PF00185)' T '13.1.2.3.21' 'amino acid metabolism.synthesis.glutamate family.arginine.ornithine carbamoyltransferase' 'niben101scf02594_657428-665346' '(at1g75330 : 563.0) ornithine carbamoyltransferase (OTC); FUNCTIONS IN: amino acid binding, ornithine carbamoyltransferase activity, carboxyl- or carbamoyltransferase activity; INVOLVED IN: cellular amino acid metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (InterPro:IPR006132), Aspartate/ornithine carbamoyltransferase (InterPro:IPR006130), Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (InterPro:IPR006131), Ornithine carbamoyltransferase (InterPro:IPR002292); BEST Arabidopsis thaliana protein match is: PYRIMIDINE B (TAIR:AT3G20330.1); Has 16793 Blast hits to 16793 proteins in 2905 species: Archae - 534; Bacteria - 11079; Metazoa - 203; Fungi - 280; Plants - 150; Viruses - 6; Other Eukaryotes - 4541 (source: NCBI BLink). & (q43814|otc_pea : 559.0) Ornithine carbamoyltransferase, chloroplast precursor (EC 2.1.3.3) (OTCase) (Ornithine transcarbamylase) - Pisum sativum (Garden pea) & (gnl|cdd|36717 : 465.0) no description available & (gnl|cdd|30427 : 414.0) no description available & (reliability: 1126.0) & (original description: Putative OTC, Description = Ornithine carbamoyltransferase, chloroplastic, PFAM = PF00185;PF02729)' T '13.1.2.3.21' 'amino acid metabolism.synthesis.glutamate family.arginine.ornithine carbamoyltransferase' 'niben101scf04113_342586-347774' '(q43814|otc_pea : 554.0) Ornithine carbamoyltransferase, chloroplast precursor (EC 2.1.3.3) (OTCase) (Ornithine transcarbamylase) - Pisum sativum (Garden pea) & (at1g75330 : 552.0) ornithine carbamoyltransferase (OTC); FUNCTIONS IN: amino acid binding, ornithine carbamoyltransferase activity, carboxyl- or carbamoyltransferase activity; INVOLVED IN: cellular amino acid metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (InterPro:IPR006132), Aspartate/ornithine carbamoyltransferase (InterPro:IPR006130), Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (InterPro:IPR006131), Ornithine carbamoyltransferase (InterPro:IPR002292); BEST Arabidopsis thaliana protein match is: PYRIMIDINE B (TAIR:AT3G20330.1); Has 16793 Blast hits to 16793 proteins in 2905 species: Archae - 534; Bacteria - 11079; Metazoa - 203; Fungi - 280; Plants - 150; Viruses - 6; Other Eukaryotes - 4541 (source: NCBI BLink). & (gnl|cdd|36717 : 459.0) no description available & (gnl|cdd|30427 : 424.0) no description available & (reliability: 1104.0) & (original description: Putative argF, Description = Ornithine carbamoyltransferase, PFAM = PF02729;PF00185)' T '13.1.2.3.21' 'amino acid metabolism.synthesis.glutamate family.arginine.ornithine carbamoyltransferase' 'niben101scf04629_291623-301648' '(q43814|otc_pea : 555.0) Ornithine carbamoyltransferase, chloroplast precursor (EC 2.1.3.3) (OTCase) (Ornithine transcarbamylase) - Pisum sativum (Garden pea) & (at1g75330 : 553.0) ornithine carbamoyltransferase (OTC); FUNCTIONS IN: amino acid binding, ornithine carbamoyltransferase activity, carboxyl- or carbamoyltransferase activity; INVOLVED IN: cellular amino acid metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (InterPro:IPR006132), Aspartate/ornithine carbamoyltransferase (InterPro:IPR006130), Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (InterPro:IPR006131), Ornithine carbamoyltransferase (InterPro:IPR002292); BEST Arabidopsis thaliana protein match is: PYRIMIDINE B (TAIR:AT3G20330.1); Has 16793 Blast hits to 16793 proteins in 2905 species: Archae - 534; Bacteria - 11079; Metazoa - 203; Fungi - 280; Plants - 150; Viruses - 6; Other Eukaryotes - 4541 (source: NCBI BLink). & (gnl|cdd|36717 : 463.0) no description available & (gnl|cdd|30427 : 413.0) no description available & (reliability: 1106.0) & (original description: Putative ArgF, Description = Plastid ornithine carbamoyltransferase, PFAM = PF02729;PF10584;PF00185;PF00227)' T '13.1.2.3.22' 'amino acid metabolism.synthesis.glutamate family.arginine.arginosuccinate synthase' 'niben101scf05330_34357-48634' '(at4g24830 : 747.0) arginosuccinate synthase family; FUNCTIONS IN: argininosuccinate synthase activity, ATP binding; INVOLVED IN: arginine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Argininosuccinate synthase, conserved site (InterPro:IPR018223), Argininosuccinate synthase (InterPro:IPR001518); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80693 : 652.0) no description available & (gnl|cdd|36918 : 558.0) no description available & (reliability: 1494.0) & (original description: Putative argG, Description = Argininosuccinate synthase, PFAM = PF00764)' T '13.1.2.3.23' 'amino acid metabolism.synthesis.glutamate family.arginine.argininosuccinate lyase' 'nbv0.3scaffold31476_8589-12387' '(at5g10920 : 377.0) L-Aspartase-like family protein; FUNCTIONS IN: argininosuccinate lyase activity, catalytic activity; INVOLVED IN: arginine biosynthetic process via ornithine, arginine biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Argininosuccinate lyase (InterPro:IPR009049), L-Aspartase-like (InterPro:IPR008948), Fumarate lyase, conserved site (InterPro:IPR020557), Lyase 1, N-terminal (InterPro:IPR022761), Delta crystallin (InterPro:IPR003031), Fumarate lyase (InterPro:IPR000362); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36530 : 335.0) no description available & (gnl|cdd|80763 : 311.0) no description available & (p22675|arly_chlre : 165.0) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase) (ASAL) - Chlamydomonas reinhardtii & (reliability: 754.0) & (original description: Putative argH, Description = ASAL, PFAM = PF14698;PF00206)' T '13.1.2.3.23' 'amino acid metabolism.synthesis.glutamate family.arginine.argininosuccinate lyase' 'niben044scf00000769ctg016_2635-5716' '(at5g10920 : 319.0) L-Aspartase-like family protein; FUNCTIONS IN: argininosuccinate lyase activity, catalytic activity; INVOLVED IN: arginine biosynthetic process via ornithine, arginine biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Argininosuccinate lyase (InterPro:IPR009049), L-Aspartase-like (InterPro:IPR008948), Fumarate lyase, conserved site (InterPro:IPR020557), Lyase 1, N-terminal (InterPro:IPR022761), Delta crystallin (InterPro:IPR003031), Fumarate lyase (InterPro:IPR000362); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36530 : 298.0) no description available & (gnl|cdd|80763 : 276.0) no description available & (p22675|arly_chlre : 138.0) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase) (ASAL) - Chlamydomonas reinhardtii & (reliability: 638.0) & (original description: Putative argH, Description = ASAL, PFAM = PF00206;PF14698)' T '13.1.2.3.23' 'amino acid metabolism.synthesis.glutamate family.arginine.argininosuccinate lyase' 'niben044scf00037921ctg002_1263-7867' '(at5g10920 : 584.0) L-Aspartase-like family protein; FUNCTIONS IN: argininosuccinate lyase activity, catalytic activity; INVOLVED IN: arginine biosynthetic process via ornithine, arginine biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Argininosuccinate lyase (InterPro:IPR009049), L-Aspartase-like (InterPro:IPR008948), Fumarate lyase, conserved site (InterPro:IPR020557), Lyase 1, N-terminal (InterPro:IPR022761), Delta crystallin (InterPro:IPR003031), Fumarate lyase (InterPro:IPR000362); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36530 : 482.0) no description available & (gnl|cdd|80763 : 475.0) no description available & (p22675|arly_chlre : 252.0) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase) (ASAL) - Chlamydomonas reinhardtii & (reliability: 1168.0) & (original description: Putative argH, Description = Argininosuccinate lyase, PFAM = PF00206)' T '13.1.2.3.23' 'amino acid metabolism.synthesis.glutamate family.arginine.argininosuccinate lyase' 'niben101scf03403_308668-341342' '(at5g10920 : 776.0) L-Aspartase-like family protein; FUNCTIONS IN: argininosuccinate lyase activity, catalytic activity; INVOLVED IN: arginine biosynthetic process via ornithine, arginine biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Argininosuccinate lyase (InterPro:IPR009049), L-Aspartase-like (InterPro:IPR008948), Fumarate lyase, conserved site (InterPro:IPR020557), Lyase 1, N-terminal (InterPro:IPR022761), Delta crystallin (InterPro:IPR003031), Fumarate lyase (InterPro:IPR000362); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36530 : 654.0) no description available & (gnl|cdd|80763 : 631.0) no description available & (p22675|arly_chlre : 321.0) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase) (ASAL) - Chlamydomonas reinhardtii & (reliability: 1552.0) & (original description: Putative argH, Description = ASAL, PFAM = PF14698;PF00206)' T '13.1.2.3.31' 'amino acid metabolism.synthesis.glutamate family.arginine.aspartate racemase' 'niben101scf07829_286821-290284' '(at1g15410 : 318.0) aspartate-glutamate racemase family; FUNCTIONS IN: racemase and epimerase activity, acting on amino acids and derivatives; INVOLVED IN: metabolic process, cellular amino acid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Asp/Glu/hydantoin racemase (InterPro:IPR015942), Aspartate racemase (InterPro:IPR004380), Asp/Glu racemase (InterPro:IPR001920); Has 2436 Blast hits to 2424 proteins in 674 species: Archae - 57; Bacteria - 1708; Metazoa - 0; Fungi - 2; Plants - 35; Viruses - 0; Other Eukaryotes - 634 (source: NCBI BLink). & (gnl|cdd|31979 : 105.0) no description available & (reliability: 636.0) & (original description: Putative LOC100193653, Description = Asp/Glu racemase isoform 1, PFAM = PF01177)' T '13.1.2.3.32' 'amino acid metabolism.synthesis.glutamate family.arginine.aspartate 4-decarboxylase' '' '' '13.1.2.3.1001' 'amino acid metabolism.synthesis.glutamate family.arginine' 'ornithine' 'amino acid synthesis.arginine; amino acid degradation.arginine; amino acid degradation.glutamate; polyamine metabolism' M '13.1.2.3.1002' 'amino acid metabolism.synthesis.glutamate family.arginine' 'arginine' 'amino acid synthesis.arginine; amino acid degradation.arginine; amino acid degradation.glutamate; polyamine metabolism' M '13.1.2.3.1003' 'amino acid metabolism.synthesis.glutamate family.arginine' 'citrulline' 'amino acid synthesis.arginine; amino acid degradation.arginine' M '13.1.2.3.1004' 'amino acid metabolism.synthesis.glutamate family.arginine' 'n-acetylglutamic acid' '' M '13.1.3' 'amino acid metabolism.synthesis.aspartate family' '' '' '13.1.3.1' 'amino acid metabolism.synthesis.aspartate family.asparagine' '' '' '13.1.3.1.1' 'amino acid metabolism.synthesis.aspartate family.asparagine.asparagine synthetase' 'nbv0.3scaffold14571_11144-18515' '(at2g03667 : 707.0) Asparagine synthase family protein; FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity; INVOLVED IN: asparagine biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Asparagine synthase (InterPro:IPR001962), Glutamine amidotransferase, type II (InterPro:IPR017932); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35793 : 314.0) no description available & (gnl|cdd|48484 : 147.0) no description available & (reliability: 1414.0) & (original description: Putative ASN4, Description = Glutamine-dependent asparagine synthetase 4, PFAM = PF00733;PF13537)' T '13.1.3.1.1' 'amino acid metabolism.synthesis.aspartate family.asparagine.asparagine synthetase' 'nbv0.3scaffold38698_13694-19286' '(at3g47340 : 1036.0) encodes a glutamine-dependent asparagine synthetase, the predicted ASN1 peptide contains a purF-type glutamine-binding domain, and is expressed predominantly in shoot tissues, where light has a negative effect on its mRNA accumulation. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.; glutamine-dependent asparagine synthase 1 (ASN1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Asparagine synthase (InterPro:IPR001962), Asparagine synthase, glutamine-hydrolyzing (InterPro:IPR006426), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: asparagine synthetase 3 (TAIR:AT5G10240.1); Has 9911 Blast hits to 9877 proteins in 1912 species: Archae - 315; Bacteria - 5703; Metazoa - 210; Fungi - 275; Plants - 333; Viruses - 5; Other Eukaryotes - 3070 (source: NCBI BLink). & (p31752|asns_aspof : 1034.0) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) (AS) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35791 : 888.0) no description available & (gnl|cdd|82993 : 814.0) no description available & (reliability: 2072.0) & (original description: Putative AS, Description = Asparagine synthetase [glutamine-hydrolyzing], PFAM = PF13537;PF00733)' T '13.1.3.1.1' 'amino acid metabolism.synthesis.aspartate family.asparagine.asparagine synthetase' 'niben044scf00016272ctg009_1-2364' '(at5g10240 : 179.0) Encodes asparagine synthetase (ASN3).; asparagine synthetase 3 (ASN3); FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity; INVOLVED IN: asparagine biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Asparagine synthase (InterPro:IPR001962), Asparagine synthase, glutamine-hydrolyzing (InterPro:IPR006426), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: asparagine synthetase 2 (TAIR:AT5G65010.1); Has 13137 Blast hits to 12731 proteins in 2385 species: Archae - 388; Bacteria - 8359; Metazoa - 215; Fungi - 297; Plants - 415; Viruses - 9; Other Eukaryotes - 3454 (source: NCBI BLink). & (q43011|asns_orysa : 178.0) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) (Glutamine-dependent asparagine synthetase) - Oryza sativa (Rice) & (gnl|cdd|35791 : 164.0) no description available & (gnl|cdd|82993 : 139.0) no description available & (reliability: 358.0) & (original description: Putative as3, Description = Asparagine synthetase B, PFAM = PF00733)' T '13.1.3.1.1' 'amino acid metabolism.synthesis.aspartate family.asparagine.asparagine synthetase' 'niben044scf00018307ctg002_3807-11300' '(q43011|asns_orysa : 732.0) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) (Glutamine-dependent asparagine synthetase) - Oryza sativa (Rice) & (at5g10240 : 726.0) Encodes asparagine synthetase (ASN3).; asparagine synthetase 3 (ASN3); FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity; INVOLVED IN: asparagine biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Asparagine synthase (InterPro:IPR001962), Asparagine synthase, glutamine-hydrolyzing (InterPro:IPR006426), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: asparagine synthetase 2 (TAIR:AT5G65010.1); Has 13137 Blast hits to 12731 proteins in 2385 species: Archae - 388; Bacteria - 8359; Metazoa - 215; Fungi - 297; Plants - 415; Viruses - 9; Other Eukaryotes - 3454 (source: NCBI BLink). & (gnl|cdd|35791 : 662.0) no description available & (gnl|cdd|82993 : 613.0) no description available & (reliability: 1452.0) & (original description: Putative asnB, Description = Asparagine synthetase B, PFAM = PF00733)' T '13.1.3.1.1' 'amino acid metabolism.synthesis.aspartate family.asparagine.asparagine synthetase' 'niben101scf01936_720399-741719' '(at5g10240 : 991.0) Encodes asparagine synthetase (ASN3).; asparagine synthetase 3 (ASN3); FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity; INVOLVED IN: asparagine biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Asparagine synthase (InterPro:IPR001962), Asparagine synthase, glutamine-hydrolyzing (InterPro:IPR006426), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: asparagine synthetase 2 (TAIR:AT5G65010.1); Has 13137 Blast hits to 12731 proteins in 2385 species: Archae - 388; Bacteria - 8359; Metazoa - 215; Fungi - 297; Plants - 415; Viruses - 9; Other Eukaryotes - 3454 (source: NCBI BLink). & (q43011|asns_orysa : 974.0) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) (Glutamine-dependent asparagine synthetase) - Oryza sativa (Rice) & (gnl|cdd|35791 : 895.0) no description available & (gnl|cdd|82993 : 825.0) no description available & (reliability: 1982.0) & (original description: Putative sas3, Description = Asparagine synthetase, type III, PFAM = PF00733;PF13537)' T '13.1.3.1.1' 'amino acid metabolism.synthesis.aspartate family.asparagine.asparagine synthetase' 'niben101scf05880_332291-339942' '(p31752|asns_aspof : 1035.0) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) (AS) - Asparagus officinalis (Garden asparagus) & (at3g47340 : 1026.0) encodes a glutamine-dependent asparagine synthetase, the predicted ASN1 peptide contains a purF-type glutamine-binding domain, and is expressed predominantly in shoot tissues, where light has a negative effect on its mRNA accumulation. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.; glutamine-dependent asparagine synthase 1 (ASN1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Asparagine synthase (InterPro:IPR001962), Asparagine synthase, glutamine-hydrolyzing (InterPro:IPR006426), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: asparagine synthetase 3 (TAIR:AT5G10240.1); Has 9911 Blast hits to 9877 proteins in 1912 species: Archae - 315; Bacteria - 5703; Metazoa - 210; Fungi - 275; Plants - 333; Viruses - 5; Other Eukaryotes - 3070 (source: NCBI BLink). & (gnl|cdd|35791 : 887.0) no description available & (gnl|cdd|82993 : 830.0) no description available & (reliability: 2052.0) & (original description: Putative AS, Description = Asparagine synthetase [glutamine-hydrolyzing], PFAM = PF00733;PF13537)' T '13.1.3.1.1' 'amino acid metabolism.synthesis.aspartate family.asparagine.asparagine synthetase' 'niben101scf07188_22563-29934' '(at2g03667 : 635.0) Asparagine synthase family protein; FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity; INVOLVED IN: asparagine biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Asparagine synthase (InterPro:IPR001962), Glutamine amidotransferase, type II (InterPro:IPR017932); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35793 : 284.0) no description available & (gnl|cdd|48484 : 146.0) no description available & (reliability: 1270.0) & (original description: Putative ASN4, Description = Glutamine-dependent asparagine synthetase 4, PFAM = PF00733;PF13537)' T '13.1.3.1.1' 'amino acid metabolism.synthesis.aspartate family.asparagine.asparagine synthetase' 'niben101scf11860_47359-53315' '(at3g47340 : 1034.0) encodes a glutamine-dependent asparagine synthetase, the predicted ASN1 peptide contains a purF-type glutamine-binding domain, and is expressed predominantly in shoot tissues, where light has a negative effect on its mRNA accumulation. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.; glutamine-dependent asparagine synthase 1 (ASN1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Asparagine synthase (InterPro:IPR001962), Asparagine synthase, glutamine-hydrolyzing (InterPro:IPR006426), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: asparagine synthetase 3 (TAIR:AT5G10240.1); Has 9911 Blast hits to 9877 proteins in 1912 species: Archae - 315; Bacteria - 5703; Metazoa - 210; Fungi - 275; Plants - 333; Viruses - 5; Other Eukaryotes - 3070 (source: NCBI BLink). & (p31752|asns_aspof : 1033.0) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) (AS) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35791 : 890.0) no description available & (gnl|cdd|82993 : 814.0) no description available & (reliability: 2068.0) & (original description: Putative AS, Description = Asparagine synthetase [glutamine-hydrolyzing], PFAM = PF00733;PF13537)' T '13.1.3.1.1001' 'amino acid metabolism.synthesis.aspartate family.asparagine' 'asparagine' 'amino acid synthesis.asparagines; amino acid degradation.asparagines; amino acid synthesis.aspartate; amino acid degradation.aspartate' M '13.1.3.2' 'amino acid metabolism.synthesis.aspartate family.threonine' '' '' '13.1.3.2.1' 'amino acid metabolism.synthesis.aspartate family.threonine.threonine synthase' 'niben101scf00747_214983-219448' '(q9mt28|thrc_soltu : 954.0) Threonine synthase, chloroplast precursor (EC 4.2.3.1) (TS) - Solanum tuberosum (Potato) & (at4g29840 : 849.0) threonine synthase; METHIONINE OVER-ACCUMULATOR 2 (MTO2); FUNCTIONS IN: threonine synthase activity; INVOLVED IN: threonine biosynthetic process, metabolic process, cellular amino acid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Threonine synthase (InterPro:IPR004450), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: Pyridoxal-5'-phosphate-dependent enzyme family protein (TAIR:AT1G72810.1); Has 6824 Blast hits to 6824 proteins in 2025 species: Archae - 409; Bacteria - 4266; Metazoa - 101; Fungi - 24; Plants - 83; Viruses - 0; Other Eukaryotes - 1941 (source: NCBI BLink). & (gnl|cdd|81907 : 319.0) no description available & (reliability: 1698.0) & (original description: Putative thrC, Description = ThrC protein, PFAM = PF00291)' T '13.1.3.2.1' 'amino acid metabolism.synthesis.aspartate family.threonine.threonine synthase' 'niben101scf00870_1527492-1532353' '(q9mt28|thrc_soltu : 977.0) Threonine synthase, chloroplast precursor (EC 4.2.3.1) (TS) - Solanum tuberosum (Potato) & (at4g29840 : 859.0) threonine synthase; METHIONINE OVER-ACCUMULATOR 2 (MTO2); FUNCTIONS IN: threonine synthase activity; INVOLVED IN: threonine biosynthetic process, metabolic process, cellular amino acid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Threonine synthase (InterPro:IPR004450), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: Pyridoxal-5'-phosphate-dependent enzyme family protein (TAIR:AT1G72810.1); Has 6824 Blast hits to 6824 proteins in 2025 species: Archae - 409; Bacteria - 4266; Metazoa - 101; Fungi - 24; Plants - 83; Viruses - 0; Other Eukaryotes - 1941 (source: NCBI BLink). & (gnl|cdd|81907 : 322.0) no description available & (reliability: 1718.0) & (original description: Putative thrC, Description = Threonine synthase, PFAM = PF00291)' T '13.1.3.2.1' 'amino acid metabolism.synthesis.aspartate family.threonine.threonine synthase' 'niben101scf02831_120116-123681' '(q9mt28|thrc_soltu : 1011.0) Threonine synthase, chloroplast precursor (EC 4.2.3.1) (TS) - Solanum tuberosum (Potato) & (at4g29840 : 877.0) threonine synthase; METHIONINE OVER-ACCUMULATOR 2 (MTO2); FUNCTIONS IN: threonine synthase activity; INVOLVED IN: threonine biosynthetic process, metabolic process, cellular amino acid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Threonine synthase (InterPro:IPR004450), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: Pyridoxal-5'-phosphate-dependent enzyme family protein (TAIR:AT1G72810.1); Has 6824 Blast hits to 6824 proteins in 2025 species: Archae - 409; Bacteria - 4266; Metazoa - 101; Fungi - 24; Plants - 83; Viruses - 0; Other Eukaryotes - 1941 (source: NCBI BLink). & (gnl|cdd|81907 : 328.0) no description available & (reliability: 1754.0) & (original description: Putative thrC, Description = Threonine synthase, PFAM = PF00291)' T '13.1.3.2.1' 'amino acid metabolism.synthesis.aspartate family.threonine.threonine synthase' 'niben101scf04018_934330-939266' '(q9mt28|thrc_soltu : 811.0) Threonine synthase, chloroplast precursor (EC 4.2.3.1) (TS) - Solanum tuberosum (Potato) & (at4g29840 : 808.0) threonine synthase; METHIONINE OVER-ACCUMULATOR 2 (MTO2); FUNCTIONS IN: threonine synthase activity; INVOLVED IN: threonine biosynthetic process, metabolic process, cellular amino acid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Threonine synthase (InterPro:IPR004450), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: Pyridoxal-5'-phosphate-dependent enzyme family protein (TAIR:AT1G72810.1); Has 6824 Blast hits to 6824 proteins in 2025 species: Archae - 409; Bacteria - 4266; Metazoa - 101; Fungi - 24; Plants - 83; Viruses - 0; Other Eukaryotes - 1941 (source: NCBI BLink). & (gnl|cdd|81907 : 325.0) no description available & (reliability: 1616.0) & (original description: Putative thrC, Description = Threonine synthase, PFAM = PF00291)' T '13.1.3.2.1' 'amino acid metabolism.synthesis.aspartate family.threonine.threonine synthase' 'niben101scf13950_35310-41024' '(q9mt28|thrc_soltu : 1004.0) Threonine synthase, chloroplast precursor (EC 4.2.3.1) (TS) - Solanum tuberosum (Potato) & (at4g29840 : 872.0) threonine synthase; METHIONINE OVER-ACCUMULATOR 2 (MTO2); FUNCTIONS IN: threonine synthase activity; INVOLVED IN: threonine biosynthetic process, metabolic process, cellular amino acid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Threonine synthase (InterPro:IPR004450), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: Pyridoxal-5'-phosphate-dependent enzyme family protein (TAIR:AT1G72810.1); Has 6824 Blast hits to 6824 proteins in 2025 species: Archae - 409; Bacteria - 4266; Metazoa - 101; Fungi - 24; Plants - 83; Viruses - 0; Other Eukaryotes - 1941 (source: NCBI BLink). & (gnl|cdd|81907 : 327.0) no description available & (reliability: 1744.0) & (original description: Putative thrC, Description = Threonine synthase, PFAM = PF00291)' T '13.1.3.2.1001' 'amino acid metabolism.synthesis.aspartate family.threonine' 'threonine' 'amino acid synthesis.isoleucine; amino acid metabolism.threonine; amino acid synthesis.threonine; amino acid degradation.threonine' M '13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'nbv0.3scaffold9327_23716-29142' '(q42699|mete_catro : 370.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (at5g17920 : 357.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|37474 : 344.0) no description available & (gnl|cdd|81472 : 328.0) no description available & (reliability: 714.0) & (original description: Putative met1, Description = Methionine synthase, PFAM = PF01717;PF08267)' T '13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'nbv0.3scaffold68684_1-7313' '(at4g38800 : 324.0) methylthioadenosine nucleosidase 1 (MTN1); FUNCTIONS IN: catalytic activity, methylthioadenosine nucleosidase activity; INVOLVED IN: L-methionine salvage from methylthioadenosine, nucleoside metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphorylase (InterPro:IPR000845), Nucleoside phosphorylase, family 1 (InterPro:IPR018017); BEST Arabidopsis thaliana protein match is: Phosphorylase superfamily protein (TAIR:AT4G34840.1); Has 2898 Blast hits to 2898 proteins in 1272 species: Archae - 0; Bacteria - 2765; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|81647 : 81.7) no description available & (reliability: 648.0) & (original description: Putative MTN1, Description = 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1, PFAM = PF01048)' T '13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'nbv0.3scaffold113382_1-2652' '(q42699|mete_catro : 519.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (at5g17920 : 508.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|37474 : 468.0) no description available & (gnl|cdd|81472 : 346.0) no description available & (reliability: 1016.0) & (original description: Putative met, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF01717;PF08267)' T '13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben044scf00013721ctg020_65-3618' '(p48498|metk_pethy : 740.0) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase) - Petunia hybrida (Petunia) & (at2g36880 : 715.0) methionine adenosyltransferase 3 (MAT3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase family protein (TAIR:AT3G17390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36719 : 674.0) no description available & (gnl|cdd|81480 : 610.0) no description available & (reliability: 1430.0) & (original description: Putative SAM3, Description = S-adenosylmethionine synthase 3, PFAM = PF02773;PF00438;PF02772)' T '13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben044scf00016613ctg008_1314-4675' '(q96552|metl_catro : 740.0) S-adenosylmethionine synthetase 2 (EC 2.5.1.6) (Methionine adenosyltransferase 2) (AdoMet synthetase 2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g17390 : 724.0) S-adenosylmethionine synthetase; METHIONINE OVER-ACCUMULATOR 3 (MTO3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: lignin biosynthetic process, response to cold, methionine metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: nucleolus, cell wall, plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 1 (TAIR:AT1G02500.2); Has 10856 Blast hits to 10849 proteins in 2868 species: Archae - 12; Bacteria - 5440; Metazoa - 373; Fungi - 167; Plants - 707; Viruses - 1; Other Eukaryotes - 4156 (source: NCBI BLink). & (gnl|cdd|36719 : 679.0) no description available & (gnl|cdd|81480 : 606.0) no description available & (reliability: 1378.0) & (original description: Putative SAMS2, Description = S-adenosylmethionine synthase 2, PFAM = PF02772;PF02773;PF00438)' T '13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf00054_171753-177211' '(q42699|mete_catro : 1357.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (at5g17920 : 1328.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|37474 : 1327.0) no description available & (gnl|cdd|81472 : 1158.0) no description available & (reliability: 2656.0) & (original description: Putative METE, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF01717;PF08267)' T '13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf00135_42046-48673' '(at4g38800 : 335.0) methylthioadenosine nucleosidase 1 (MTN1); FUNCTIONS IN: catalytic activity, methylthioadenosine nucleosidase activity; INVOLVED IN: L-methionine salvage from methylthioadenosine, nucleoside metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphorylase (InterPro:IPR000845), Nucleoside phosphorylase, family 1 (InterPro:IPR018017); BEST Arabidopsis thaliana protein match is: Phosphorylase superfamily protein (TAIR:AT4G34840.1); Has 2898 Blast hits to 2898 proteins in 1272 species: Archae - 0; Bacteria - 2765; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|81647 : 84.0) no description available & (reliability: 670.0) & (original description: Putative MTN1, Description = 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1, PFAM = PF01048)' T '13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf00285_49111-52280' '(p48498|metk_pethy : 741.0) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase) - Petunia hybrida (Petunia) & (at2g36880 : 716.0) methionine adenosyltransferase 3 (MAT3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase family protein (TAIR:AT3G17390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36719 : 674.0) no description available & (gnl|cdd|81480 : 611.0) no description available & (reliability: 1432.0) & (original description: Putative SAM3, Description = S-adenosylmethionine synthase 3, PFAM = PF02772;PF02773;PF00438)' T '13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf00402_434738-437916' '(q96551|metk_catro : 745.0) S-adenosylmethionine synthetase 1 (EC 2.5.1.6) (Methionine adenosyltransferase 1) (AdoMet synthetase 1) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g01850 : 729.0) S-adenosylmethionine synthetase 2 (SAM-2); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 1 (TAIR:AT1G02500.2); Has 10906 Blast hits to 10898 proteins in 2898 species: Archae - 12; Bacteria - 5497; Metazoa - 373; Fungi - 167; Plants - 706; Viruses - 1; Other Eukaryotes - 4150 (source: NCBI BLink). & (gnl|cdd|36719 : 683.0) no description available & (gnl|cdd|81480 : 611.0) no description available & (reliability: 1384.0) & (original description: Putative SAMS2, Description = S-adenosylmethionine synthase 2, PFAM = PF02773;PF00438;PF02772)' T '13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf01812_227634-233047' '(q42699|mete_catro : 1354.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (gnl|cdd|37474 : 1337.0) no description available & (at5g17920 : 1326.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|81472 : 1169.0) no description available & (reliability: 2652.0) & (original description: Putative METE, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF01717;PF08267)' T '13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf01820_53714-56892' '(q96552|metl_catro : 742.0) S-adenosylmethionine synthetase 2 (EC 2.5.1.6) (Methionine adenosyltransferase 2) (AdoMet synthetase 2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g02500 : 735.0) encodes a S-adenosylmethionine synthetase. SAM1 is regulated by protein S-nitrosylation. The covalent binding of nitric oxide (NO) to the Cys114 residue inhibits the enzyme activity.; S-adenosylmethionine synthetase 1 (SAM1); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: response to cadmium ion, response to salt stress, ethylene biosynthetic process, S-adenosylmethionine biosynthetic process; LOCATED IN: cell wall, plasma membrane, membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 2 (TAIR:AT4G01850.2); Has 10905 Blast hits to 10897 proteins in 2898 species: Archae - 12; Bacteria - 5497; Metazoa - 373; Fungi - 167; Plants - 706; Viruses - 1; Other Eukaryotes - 4149 (source: NCBI BLink). & (gnl|cdd|36719 : 682.0) no description available & (gnl|cdd|81480 : 607.0) no description available & (reliability: 1394.0) & (original description: Putative METK5, Description = S-adenosylmethionine synthase 5, PFAM = PF02772;PF00438;PF02773)' T '13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf02502_472907-476076' '(p48498|metk_pethy : 744.0) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase) - Petunia hybrida (Petunia) & (at2g36880 : 719.0) methionine adenosyltransferase 3 (MAT3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase family protein (TAIR:AT3G17390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36719 : 673.0) no description available & (gnl|cdd|81480 : 608.0) no description available & (reliability: 1438.0) & (original description: Putative SAM3, Description = S-adenosylmethionine synthase 3, PFAM = PF02772;PF00438;PF02773)' T '13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf03634_472618-478040' '(q42699|mete_catro : 1383.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (gnl|cdd|37474 : 1346.0) no description available & (at5g17920 : 1339.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|81472 : 1171.0) no description available & (reliability: 2678.0) & (original description: Putative METE, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF01717;PF08267)' T '13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf04643_198484-201653' '(p48498|metk_pethy : 752.0) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase) - Petunia hybrida (Petunia) & (at2g36880 : 721.0) methionine adenosyltransferase 3 (MAT3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase family protein (TAIR:AT3G17390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36719 : 674.0) no description available & (gnl|cdd|81480 : 610.0) no description available & (reliability: 1442.0) & (original description: Putative SAM3, Description = S-adenosylmethionine synthase 3, PFAM = PF00438;PF02773;PF02772)' T '13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf05629_213814-227267' '(at5g17920 : 360.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (q42699|mete_catro : 358.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (gnl|cdd|37474 : 348.0) no description available & (gnl|cdd|81472 : 337.0) no description available & (reliability: 720.0) & (original description: Putative met1, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF08267;PF01717)' T '13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf07438_445537-452199' '(q42699|mete_catro : 1377.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (gnl|cdd|37474 : 1355.0) no description available & (at5g17920 : 1349.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|81472 : 1177.0) no description available & (reliability: 2698.0) & (original description: Putative MS1, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1, PFAM = PF08267;PF01717)' T '13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf09725_82734-88458' '(q42699|mete_catro : 1365.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (gnl|cdd|37474 : 1335.0) no description available & (at5g17920 : 1334.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|81472 : 1161.0) no description available & (reliability: 2668.0) & (original description: Putative metE, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF08267;PF01717)' T '13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf09813_22663-31618' '(q42699|mete_catro : 1390.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (at5g17920 : 1371.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|37474 : 1323.0) no description available & (gnl|cdd|81472 : 1178.0) no description available & (reliability: 2742.0) & (original description: Putative METE, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF01717;PF08267)' T '13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'niben101scf15054_179944-183122' '(q96551|metk_catro : 731.0) S-adenosylmethionine synthetase 1 (EC 2.5.1.6) (Methionine adenosyltransferase 1) (AdoMet synthetase 1) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g17390 : 707.0) S-adenosylmethionine synthetase; METHIONINE OVER-ACCUMULATOR 3 (MTO3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: lignin biosynthetic process, response to cold, methionine metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: nucleolus, cell wall, plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 1 (TAIR:AT1G02500.2); Has 10856 Blast hits to 10849 proteins in 2868 species: Archae - 12; Bacteria - 5440; Metazoa - 373; Fungi - 167; Plants - 707; Viruses - 1; Other Eukaryotes - 4156 (source: NCBI BLink). & (gnl|cdd|36719 : 662.0) no description available & (gnl|cdd|81480 : 592.0) no description available & (reliability: 1368.0) & (original description: Putative SAMS2, Description = S-adenosylmethionine synthase 2, PFAM = PF00438;PF02773;PF02772)' T '13.1.3.4.1' 'amino acid metabolism.synthesis.aspartate family.methionine.cystathionine gamma-synthase' 'nbv0.5scaffold1805_199656-205984' '(at3g01120 : 720.0) encodes a cystathionine gamma-synthase, which performs the first committed step in methionine biosynthesis. A conserved motif of 13 amino acids in the first exon is required for posttranscriptional autoregulation. This enzyme shares the same substrate as threonine synthase (TS) and its absence transcriptionally affects 8 genes in the genome.; METHIONINE OVERACCUMULATION 1 (MTO1); FUNCTIONS IN: cystathionine gamma-synthase activity; INVOLVED IN: methionine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G33320.1); Has 21364 Blast hits to 20702 proteins in 2452 species: Archae - 220; Bacteria - 11705; Metazoa - 241; Fungi - 842; Plants - 284; Viruses - 13; Other Eukaryotes - 8059 (source: NCBI BLink). & (gnl|cdd|85211 : 480.0) no description available & (gnl|cdd|35276 : 444.0) no description available & (reliability: 1440.0) & (original description: Putative metB, Description = Cystathionine gamma-synthase, PFAM = PF01053)' T '13.1.3.4.1' 'amino acid metabolism.synthesis.aspartate family.methionine.cystathionine gamma-synthase' 'niben044scf00002367ctg021_4378-11283' '(at3g01120 : 630.0) encodes a cystathionine gamma-synthase, which performs the first committed step in methionine biosynthesis. A conserved motif of 13 amino acids in the first exon is required for posttranscriptional autoregulation. This enzyme shares the same substrate as threonine synthase (TS) and its absence transcriptionally affects 8 genes in the genome.; METHIONINE OVERACCUMULATION 1 (MTO1); FUNCTIONS IN: cystathionine gamma-synthase activity; INVOLVED IN: methionine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G33320.1); Has 21364 Blast hits to 20702 proteins in 2452 species: Archae - 220; Bacteria - 11705; Metazoa - 241; Fungi - 842; Plants - 284; Viruses - 13; Other Eukaryotes - 8059 (source: NCBI BLink). & (gnl|cdd|85211 : 406.0) no description available & (gnl|cdd|35276 : 378.0) no description available & (reliability: 1260.0) & (original description: Putative metB, Description = Cystathionine gamma-synthase, PFAM = PF01053)' T '13.1.3.4.1' 'amino acid metabolism.synthesis.aspartate family.methionine.cystathionine gamma-synthase' 'niben044scf00023314ctg000_1-6529' '(at3g01120 : 706.0) encodes a cystathionine gamma-synthase, which performs the first committed step in methionine biosynthesis. A conserved motif of 13 amino acids in the first exon is required for posttranscriptional autoregulation. This enzyme shares the same substrate as threonine synthase (TS) and its absence transcriptionally affects 8 genes in the genome.; METHIONINE OVERACCUMULATION 1 (MTO1); FUNCTIONS IN: cystathionine gamma-synthase activity; INVOLVED IN: methionine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G33320.1); Has 21364 Blast hits to 20702 proteins in 2452 species: Archae - 220; Bacteria - 11705; Metazoa - 241; Fungi - 842; Plants - 284; Viruses - 13; Other Eukaryotes - 8059 (source: NCBI BLink). & (gnl|cdd|85211 : 482.0) no description available & (gnl|cdd|35276 : 447.0) no description available & (reliability: 1412.0) & (original description: Putative cys, Description = Cystathionine-gamma-synthase, PFAM = PF01053)' T '13.1.3.4.1' 'amino acid metabolism.synthesis.aspartate family.methionine.cystathionine gamma-synthase' 'niben101scf00136_358019-365633' '(at3g01120 : 716.0) encodes a cystathionine gamma-synthase, which performs the first committed step in methionine biosynthesis. A conserved motif of 13 amino acids in the first exon is required for posttranscriptional autoregulation. This enzyme shares the same substrate as threonine synthase (TS) and its absence transcriptionally affects 8 genes in the genome.; METHIONINE OVERACCUMULATION 1 (MTO1); FUNCTIONS IN: cystathionine gamma-synthase activity; INVOLVED IN: methionine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G33320.1); Has 21364 Blast hits to 20702 proteins in 2452 species: Archae - 220; Bacteria - 11705; Metazoa - 241; Fungi - 842; Plants - 284; Viruses - 13; Other Eukaryotes - 8059 (source: NCBI BLink). & (gnl|cdd|85211 : 487.0) no description available & (gnl|cdd|35276 : 452.0) no description available & (reliability: 1432.0) & (original description: Putative metB, Description = Cystathionine gamma-synthase, PFAM = PF01053)' T '13.1.3.4.1' 'amino acid metabolism.synthesis.aspartate family.methionine.cystathionine gamma-synthase' 'niben101scf06457_35286-41589' '(at3g01120 : 711.0) encodes a cystathionine gamma-synthase, which performs the first committed step in methionine biosynthesis. A conserved motif of 13 amino acids in the first exon is required for posttranscriptional autoregulation. This enzyme shares the same substrate as threonine synthase (TS) and its absence transcriptionally affects 8 genes in the genome.; METHIONINE OVERACCUMULATION 1 (MTO1); FUNCTIONS IN: cystathionine gamma-synthase activity; INVOLVED IN: methionine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G33320.1); Has 21364 Blast hits to 20702 proteins in 2452 species: Archae - 220; Bacteria - 11705; Metazoa - 241; Fungi - 842; Plants - 284; Viruses - 13; Other Eukaryotes - 8059 (source: NCBI BLink). & (gnl|cdd|85211 : 479.0) no description available & (gnl|cdd|35276 : 443.0) no description available & (reliability: 1422.0) & (original description: Putative metC, Description = Cystathionine gamma-lyase, PFAM = PF01053)' T '13.1.3.4.2' 'amino acid metabolism.synthesis.aspartate family.methionine.cystathionine beta-lyase' 'nbv0.3scaffold26168_18745-27148' '(at3g57050 : 179.0) Encodes second enzyme in the methionine biosynthetic pathway; cystathionine beta-lyase (CBL); FUNCTIONS IN: cystathionine beta-lyase activity; INVOLVED IN: L-methionine biosynthetic process from L-homoserine via cystathionine; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Cystathionine beta-lyase, eukaryotic (InterPro:IPR006238), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT3G01120.1); Has 20092 Blast hits to 20089 proteins in 2449 species: Archae - 218; Bacteria - 12272; Metazoa - 204; Fungi - 782; Plants - 267; Viruses - 1; Other Eukaryotes - 6348 (source: NCBI BLink). & (gnl|cdd|85211 : 140.0) no description available & (gnl|cdd|35276 : 115.0) no description available & (reliability: 358.0) & (original description: Putative mcc, Description = Cystathionine beta-lyase, PFAM = PF01053)' T '13.1.3.4.2' 'amino acid metabolism.synthesis.aspartate family.methionine.cystathionine beta-lyase' 'nbv0.5scaffold2587_182464-190483' '(at3g57050 : 628.0) Encodes second enzyme in the methionine biosynthetic pathway; cystathionine beta-lyase (CBL); FUNCTIONS IN: cystathionine beta-lyase activity; INVOLVED IN: L-methionine biosynthetic process from L-homoserine via cystathionine; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Cystathionine beta-lyase, eukaryotic (InterPro:IPR006238), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT3G01120.1); Has 20092 Blast hits to 20089 proteins in 2449 species: Archae - 218; Bacteria - 12272; Metazoa - 204; Fungi - 782; Plants - 267; Viruses - 1; Other Eukaryotes - 6348 (source: NCBI BLink). & (gnl|cdd|85211 : 487.0) no description available & (gnl|cdd|35276 : 416.0) no description available & (reliability: 1256.0) & (original description: Putative mcc, Description = Cystathionine beta-lyase, PFAM = PF01053)' T '13.1.3.4.2' 'amino acid metabolism.synthesis.aspartate family.methionine.cystathionine beta-lyase' 'niben101scf03006_615988-633824' '(at3g57050 : 613.0) Encodes second enzyme in the methionine biosynthetic pathway; cystathionine beta-lyase (CBL); FUNCTIONS IN: cystathionine beta-lyase activity; INVOLVED IN: L-methionine biosynthetic process from L-homoserine via cystathionine; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Cystathionine beta-lyase, eukaryotic (InterPro:IPR006238), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT3G01120.1); Has 20092 Blast hits to 20089 proteins in 2449 species: Archae - 218; Bacteria - 12272; Metazoa - 204; Fungi - 782; Plants - 267; Viruses - 1; Other Eukaryotes - 6348 (source: NCBI BLink). & (gnl|cdd|85211 : 469.0) no description available & (gnl|cdd|35276 : 396.0) no description available & (reliability: 1226.0) & (original description: Putative mcc, Description = Cystathionine beta-lyase, PFAM = PF01053)' T '13.1.3.4.2' 'amino acid metabolism.synthesis.aspartate family.methionine.cystathionine beta-lyase' 'niben101scf05535_419906-424202' '(at3g57050 : 430.0) Encodes second enzyme in the methionine biosynthetic pathway; cystathionine beta-lyase (CBL); FUNCTIONS IN: cystathionine beta-lyase activity; INVOLVED IN: L-methionine biosynthetic process from L-homoserine via cystathionine; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Cystathionine beta-lyase, eukaryotic (InterPro:IPR006238), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT3G01120.1); Has 20092 Blast hits to 20089 proteins in 2449 species: Archae - 218; Bacteria - 12272; Metazoa - 204; Fungi - 782; Plants - 267; Viruses - 1; Other Eukaryotes - 6348 (source: NCBI BLink). & (gnl|cdd|85211 : 327.0) no description available & (gnl|cdd|35276 : 279.0) no description available & (reliability: 860.0) & (original description: Putative mccB, Description = Cystathionine beta-lyase, PFAM = PF01053)' T '13.1.3.4.2' 'amino acid metabolism.synthesis.aspartate family.methionine.cystathionine beta-lyase' 'niben101scf08333_808480-831538' '(at3g57050 : 637.0) Encodes second enzyme in the methionine biosynthetic pathway; cystathionine beta-lyase (CBL); FUNCTIONS IN: cystathionine beta-lyase activity; INVOLVED IN: L-methionine biosynthetic process from L-homoserine via cystathionine; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Cystathionine beta-lyase, eukaryotic (InterPro:IPR006238), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT3G01120.1); Has 20092 Blast hits to 20089 proteins in 2449 species: Archae - 218; Bacteria - 12272; Metazoa - 204; Fungi - 782; Plants - 267; Viruses - 1; Other Eukaryotes - 6348 (source: NCBI BLink). & (gnl|cdd|85211 : 498.0) no description available & (gnl|cdd|35276 : 420.0) no description available & (reliability: 1274.0) & (original description: Putative mcc, Description = Cystathionine beta-lyase, PFAM = PF01053)' T '13.1.3.4.3' 'amino acid metabolism.synthesis.aspartate family.methionine.methionine synthase' 'nbv0.3scaffold9327_23716-29142' '(q42699|mete_catro : 370.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (at5g17920 : 357.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|37474 : 344.0) no description available & (gnl|cdd|81472 : 328.0) no description available & (reliability: 708.0) & (original description: Putative met1, Description = Methionine synthase, PFAM = PF01717;PF08267)' T '13.1.3.4.3' 'amino acid metabolism.synthesis.aspartate family.methionine.methionine synthase' 'nbv0.3scaffold113382_1-2652' '(q42699|mete_catro : 519.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (at5g17920 : 508.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|37474 : 468.0) no description available & (gnl|cdd|81472 : 346.0) no description available & (reliability: 992.0) & (original description: Putative met, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF01717;PF08267)' T '13.1.3.4.3' 'amino acid metabolism.synthesis.aspartate family.methionine.methionine synthase' 'niben101scf00054_171753-177211' '(q42699|mete_catro : 1357.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (at5g17920 : 1328.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|37474 : 1327.0) no description available & (gnl|cdd|81472 : 1158.0) no description available & (reliability: 2630.0) & (original description: Putative METE, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF01717;PF08267)' T '13.1.3.4.3' 'amino acid metabolism.synthesis.aspartate family.methionine.methionine synthase' 'niben101scf01812_227634-233047' '(q42699|mete_catro : 1354.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (gnl|cdd|37474 : 1337.0) no description available & (at5g17920 : 1326.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|81472 : 1169.0) no description available & (reliability: 2634.0) & (original description: Putative METE, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF01717;PF08267)' T '13.1.3.4.3' 'amino acid metabolism.synthesis.aspartate family.methionine.methionine synthase' 'niben101scf03634_472618-478040' '(q42699|mete_catro : 1383.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (gnl|cdd|37474 : 1346.0) no description available & (at5g17920 : 1339.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|81472 : 1171.0) no description available & (reliability: 2652.0) & (original description: Putative METE, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF01717;PF08267)' T '13.1.3.4.3' 'amino acid metabolism.synthesis.aspartate family.methionine.methionine synthase' 'niben101scf05629_213814-227267' '(at5g17920 : 360.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (q42699|mete_catro : 358.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (gnl|cdd|37474 : 348.0) no description available & (gnl|cdd|81472 : 337.0) no description available & (reliability: 708.0) & (original description: Putative met1, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF08267;PF01717)' T '13.1.3.4.3' 'amino acid metabolism.synthesis.aspartate family.methionine.methionine synthase' 'niben101scf07438_445537-452199' '(q42699|mete_catro : 1377.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (gnl|cdd|37474 : 1355.0) no description available & (at5g17920 : 1349.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|81472 : 1177.0) no description available & (reliability: 2676.0) & (original description: Putative MS1, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1, PFAM = PF08267;PF01717)' T '13.1.3.4.3' 'amino acid metabolism.synthesis.aspartate family.methionine.methionine synthase' 'niben101scf09725_82734-88458' '(q42699|mete_catro : 1365.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (gnl|cdd|37474 : 1335.0) no description available & (at5g17920 : 1334.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|81472 : 1161.0) no description available & (reliability: 2646.0) & (original description: Putative metE, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF08267;PF01717)' T '13.1.3.4.3' 'amino acid metabolism.synthesis.aspartate family.methionine.methionine synthase' 'niben101scf09813_22663-31618' '(q42699|mete_catro : 1390.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Catharanthus roseus (Rosy periwinkle) (Madag & (at5g17920 : 1371.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (gnl|cdd|37474 : 1323.0) no description available & (gnl|cdd|81472 : 1178.0) no description available & (reliability: 2710.0) & (original description: Putative METE, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF01717;PF08267)' T '13.1.3.4.11' 'amino acid metabolism.synthesis.aspartate family.methionine.S-adenosylmethionine synthetase' 'niben044scf00013721ctg020_65-3618' '(p48498|metk_pethy : 740.0) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase) - Petunia hybrida (Petunia) & (at2g36880 : 715.0) methionine adenosyltransferase 3 (MAT3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase family protein (TAIR:AT3G17390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36719 : 674.0) no description available & (gnl|cdd|81480 : 610.0) no description available & (reliability: 1364.0) & (original description: Putative SAM3, Description = S-adenosylmethionine synthase 3, PFAM = PF02773;PF00438;PF02772)' T '13.1.3.4.11' 'amino acid metabolism.synthesis.aspartate family.methionine.S-adenosylmethionine synthetase' 'niben044scf00016613ctg008_1314-4675' '(q96552|metl_catro : 740.0) S-adenosylmethionine synthetase 2 (EC 2.5.1.6) (Methionine adenosyltransferase 2) (AdoMet synthetase 2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g17390 : 724.0) S-adenosylmethionine synthetase; METHIONINE OVER-ACCUMULATOR 3 (MTO3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: lignin biosynthetic process, response to cold, methionine metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: nucleolus, cell wall, plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 1 (TAIR:AT1G02500.2); Has 10856 Blast hits to 10849 proteins in 2868 species: Archae - 12; Bacteria - 5440; Metazoa - 373; Fungi - 167; Plants - 707; Viruses - 1; Other Eukaryotes - 4156 (source: NCBI BLink). & (gnl|cdd|36719 : 679.0) no description available & (gnl|cdd|81480 : 606.0) no description available & (reliability: 1444.0) & (original description: Putative SAMS2, Description = S-adenosylmethionine synthase 2, PFAM = PF02772;PF02773;PF00438)' T '13.1.3.4.11' 'amino acid metabolism.synthesis.aspartate family.methionine.S-adenosylmethionine synthetase' 'niben101scf00285_49111-52280' '(p48498|metk_pethy : 741.0) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase) - Petunia hybrida (Petunia) & (at2g36880 : 716.0) methionine adenosyltransferase 3 (MAT3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase family protein (TAIR:AT3G17390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36719 : 674.0) no description available & (gnl|cdd|81480 : 611.0) no description available & (reliability: 1366.0) & (original description: Putative SAM3, Description = S-adenosylmethionine synthase 3, PFAM = PF02772;PF02773;PF00438)' T '13.1.3.4.11' 'amino acid metabolism.synthesis.aspartate family.methionine.S-adenosylmethionine synthetase' 'niben101scf00402_434738-437916' '(q96551|metk_catro : 745.0) S-adenosylmethionine synthetase 1 (EC 2.5.1.6) (Methionine adenosyltransferase 1) (AdoMet synthetase 1) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g01850 : 729.0) S-adenosylmethionine synthetase 2 (SAM-2); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 1 (TAIR:AT1G02500.2); Has 10906 Blast hits to 10898 proteins in 2898 species: Archae - 12; Bacteria - 5497; Metazoa - 373; Fungi - 167; Plants - 706; Viruses - 1; Other Eukaryotes - 4150 (source: NCBI BLink). & (gnl|cdd|36719 : 683.0) no description available & (gnl|cdd|81480 : 611.0) no description available & (reliability: 1458.0) & (original description: Putative SAMS2, Description = S-adenosylmethionine synthase 2, PFAM = PF02773;PF00438;PF02772)' T '13.1.3.4.11' 'amino acid metabolism.synthesis.aspartate family.methionine.S-adenosylmethionine synthetase' 'niben101scf01820_53714-56892' '(q96552|metl_catro : 742.0) S-adenosylmethionine synthetase 2 (EC 2.5.1.6) (Methionine adenosyltransferase 2) (AdoMet synthetase 2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g02500 : 735.0) encodes a S-adenosylmethionine synthetase. SAM1 is regulated by protein S-nitrosylation. The covalent binding of nitric oxide (NO) to the Cys114 residue inhibits the enzyme activity.; S-adenosylmethionine synthetase 1 (SAM1); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: response to cadmium ion, response to salt stress, ethylene biosynthetic process, S-adenosylmethionine biosynthetic process; LOCATED IN: cell wall, plasma membrane, membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 2 (TAIR:AT4G01850.2); Has 10905 Blast hits to 10897 proteins in 2898 species: Archae - 12; Bacteria - 5497; Metazoa - 373; Fungi - 167; Plants - 706; Viruses - 1; Other Eukaryotes - 4149 (source: NCBI BLink). & (gnl|cdd|36719 : 682.0) no description available & (gnl|cdd|81480 : 607.0) no description available & (reliability: 1470.0) & (original description: Putative METK5, Description = S-adenosylmethionine synthase 5, PFAM = PF02772;PF00438;PF02773)' T '13.1.3.4.11' 'amino acid metabolism.synthesis.aspartate family.methionine.S-adenosylmethionine synthetase' 'niben101scf02502_472907-476076' '(p48498|metk_pethy : 744.0) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase) - Petunia hybrida (Petunia) & (at2g36880 : 719.0) methionine adenosyltransferase 3 (MAT3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase family protein (TAIR:AT3G17390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36719 : 673.0) no description available & (gnl|cdd|81480 : 608.0) no description available & (reliability: 1358.0) & (original description: Putative SAM3, Description = S-adenosylmethionine synthase 3, PFAM = PF02772;PF00438;PF02773)' T '13.1.3.4.11' 'amino acid metabolism.synthesis.aspartate family.methionine.S-adenosylmethionine synthetase' 'niben101scf04643_198484-201653' '(p48498|metk_pethy : 752.0) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase) - Petunia hybrida (Petunia) & (at2g36880 : 721.0) methionine adenosyltransferase 3 (MAT3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase family protein (TAIR:AT3G17390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36719 : 674.0) no description available & (gnl|cdd|81480 : 610.0) no description available & (reliability: 1382.0) & (original description: Putative SAM3, Description = S-adenosylmethionine synthase 3, PFAM = PF00438;PF02773;PF02772)' T '13.1.3.4.11' 'amino acid metabolism.synthesis.aspartate family.methionine.S-adenosylmethionine synthetase' 'niben101scf15054_179944-183122' '(q96551|metk_catro : 731.0) S-adenosylmethionine synthetase 1 (EC 2.5.1.6) (Methionine adenosyltransferase 1) (AdoMet synthetase 1) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g17390 : 707.0) S-adenosylmethionine synthetase; METHIONINE OVER-ACCUMULATOR 3 (MTO3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: lignin biosynthetic process, response to cold, methionine metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: nucleolus, cell wall, plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 1 (TAIR:AT1G02500.2); Has 10856 Blast hits to 10849 proteins in 2868 species: Archae - 12; Bacteria - 5440; Metazoa - 373; Fungi - 167; Plants - 707; Viruses - 1; Other Eukaryotes - 4156 (source: NCBI BLink). & (gnl|cdd|36719 : 662.0) no description available & (gnl|cdd|81480 : 592.0) no description available & (reliability: 1414.0) & (original description: Putative SAMS2, Description = S-adenosylmethionine synthase 2, PFAM = PF00438;PF02773;PF02772)' T '13.1.3.4.12' 'amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase' 'nbv0.3scaffold37990_6113-17689' '(at3g60910 : 296.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G17365.1); Has 1732 Blast hits to 1731 proteins in 520 species: Archae - 43; Bacteria - 761; Metazoa - 337; Fungi - 50; Plants - 206; Viruses - 0; Other Eukaryotes - 335 (source: NCBI BLink). & (gnl|cdd|37563 : 138.0) no description available & (reliability: 592.0) & (original description: Putative BnaC08g31050D, Description = BnaC08g31050D protein, PFAM = PF13649)' T '13.1.3.4.12' 'amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase' 'nbv0.5scaffold2_1630728-1636887' '(at3g63250 : 380.0) Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds.; homocysteine methyltransferase 2 (HMT2); FUNCTIONS IN: homocysteine S-methyltransferase activity; INVOLVED IN: methionine biosynthetic process, S-methylmethionine cycle; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homocysteine S-methyltransferase (InterPro:IPR003726); BEST Arabidopsis thaliana protein match is: homocysteine S-methyltransferase 3 (TAIR:AT3G22740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9fum9|hmt2_maize : 331.0) Homocysteine S-methyltransferase 2 (EC 2.1.1.10) (S-methylmethionine:homocysteine methyltransferase 2) (SMM:Hcy S-methyltransferase 2) (ZmHMT-2) - Zea mays (Maize) & (gnl|cdd|83039 : 277.0) no description available & (gnl|cdd|36792 : 261.0) no description available & (reliability: 760.0) & (original description: Putative mmuM, Description = Homocysteine methyltransferase, PFAM = PF02574)' T '13.1.3.4.12' 'amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase' 'nbv0.5scaffold1613_4201-17282' '(at3g60910 : 353.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G17365.1); Has 1732 Blast hits to 1731 proteins in 520 species: Archae - 43; Bacteria - 761; Metazoa - 337; Fungi - 50; Plants - 206; Viruses - 0; Other Eukaryotes - 335 (source: NCBI BLink). & (gnl|cdd|37563 : 165.0) no description available & (reliability: 706.0) & (original description: Putative BnaCnng13390D, Description = BnaCnng13390D protein, PFAM = PF08241)' T '13.1.3.4.12' 'amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase' 'niben044scf00009528ctg013_347-6610' '(at3g63250 : 429.0) Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds.; homocysteine methyltransferase 2 (HMT2); FUNCTIONS IN: homocysteine S-methyltransferase activity; INVOLVED IN: methionine biosynthetic process, S-methylmethionine cycle; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homocysteine S-methyltransferase (InterPro:IPR003726); BEST Arabidopsis thaliana protein match is: homocysteine S-methyltransferase 3 (TAIR:AT3G22740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9fum9|hmt2_maize : 380.0) Homocysteine S-methyltransferase 2 (EC 2.1.1.10) (S-methylmethionine:homocysteine methyltransferase 2) (SMM:Hcy S-methyltransferase 2) (ZmHMT-2) - Zea mays (Maize) & (gnl|cdd|83039 : 307.0) no description available & (gnl|cdd|36792 : 280.0) no description available & (reliability: 858.0) & (original description: Putative smt, Description = Selenocysteine methyltransferase, PFAM = PF02574;PF02574)' T '13.1.3.4.12' 'amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase' 'niben044scf00057669ctg000_2541-6408' '(at3g60910 : 285.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G17365.1); Has 1732 Blast hits to 1731 proteins in 520 species: Archae - 43; Bacteria - 761; Metazoa - 337; Fungi - 50; Plants - 206; Viruses - 0; Other Eukaryotes - 335 (source: NCBI BLink). & (gnl|cdd|37563 : 134.0) no description available & (reliability: 570.0) & (original description: Putative PGSC0003DMG400006770, Description = Methyltransferase-like protein 13, PFAM = PF13649)' T '13.1.3.4.12' 'amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase' 'niben101scf00199_229989-234236' '(at3g60910 : 296.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G17365.1); Has 1732 Blast hits to 1731 proteins in 520 species: Archae - 43; Bacteria - 761; Metazoa - 337; Fungi - 50; Plants - 206; Viruses - 0; Other Eukaryotes - 335 (source: NCBI BLink). & (gnl|cdd|37563 : 148.0) no description available & (reliability: 592.0) & (original description: Putative AlNc14C21G2217, Description = Putative methyltransferase, PFAM = PF08241)' T '13.1.3.4.12' 'amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase' 'niben101scf01982_346879-351638' '(at3g25900 : 525.0) HMT-1; CONTAINS InterPro DOMAIN/s: Homocysteine S-methyltransferase (InterPro:IPR003726); BEST Arabidopsis thaliana protein match is: homocysteine S-methyltransferase 3 (TAIR:AT3G22740.1). & (q9fun0|hmt1_maize : 462.0) Homocysteine S-methyltransferase 1 (EC 2.1.1.10) (S-methylmethionine:homocysteine methyltransferase 1) (SMM:Hcy S-methyltransferase 1) (ZmHMT-1) - Zea mays (Maize) & (gnl|cdd|83039 : 359.0) no description available & (gnl|cdd|36792 : 339.0) no description available & (reliability: 1050.0) & (original description: Putative mmuM, Description = Homocysteine methyltransferase, PFAM = PF02574)' T '13.1.3.4.12' 'amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase' 'niben101scf02059_587073-614899' '(at2g41040 : 420.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: response to karrikin; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G78140.1); Has 8121 Blast hits to 8118 proteins in 1828 species: Archae - 365; Bacteria - 6420; Metazoa - 92; Fungi - 271; Plants - 324; Viruses - 0; Other Eukaryotes - 649 (source: NCBI BLink). & (gnl|cdd|87468 : 81.1) no description available & (reliability: 840.0) & (original description: Putative At2g41040, Description = Uncharacterized methyltransferase At2g41040, chloroplastic, PFAM = PF08241)' T '13.1.3.4.12' 'amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase' 'niben101scf02829_803784-811506' '(at3g63250 : 494.0) Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds.; homocysteine methyltransferase 2 (HMT2); FUNCTIONS IN: homocysteine S-methyltransferase activity; INVOLVED IN: methionine biosynthetic process, S-methylmethionine cycle; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homocysteine S-methyltransferase (InterPro:IPR003726); BEST Arabidopsis thaliana protein match is: homocysteine S-methyltransferase 3 (TAIR:AT3G22740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9fum8|hmt3_maize : 444.0) Homocysteine S-methyltransferase 3 (EC 2.1.1.10) (S-methylmethionine:homocysteine methyltransferase 3) (SMM:Hcy S-methyltransferase 3) (ZmHMT-3) - Zea mays (Maize) & (gnl|cdd|83039 : 351.0) no description available & (gnl|cdd|36792 : 334.0) no description available & (reliability: 988.0) & (original description: Putative smt, Description = Selenocysteine methyltransferase, PFAM = PF02574)' T '13.1.3.4.12' 'amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase' 'niben101scf03469_387161-393350' '(at3g63250 : 472.0) Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds.; homocysteine methyltransferase 2 (HMT2); FUNCTIONS IN: homocysteine S-methyltransferase activity; INVOLVED IN: methionine biosynthetic process, S-methylmethionine cycle; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homocysteine S-methyltransferase (InterPro:IPR003726); BEST Arabidopsis thaliana protein match is: homocysteine S-methyltransferase 3 (TAIR:AT3G22740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9fum9|hmt2_maize : 427.0) Homocysteine S-methyltransferase 2 (EC 2.1.1.10) (S-methylmethionine:homocysteine methyltransferase 2) (SMM:Hcy S-methyltransferase 2) (ZmHMT-2) - Zea mays (Maize) & (gnl|cdd|83039 : 351.0) no description available & (gnl|cdd|36792 : 324.0) no description available & (reliability: 944.0) & (original description: Putative smt, Description = Selenocysteine methyltransferase, PFAM = PF02574)' T '13.1.3.4.12' 'amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase' 'niben101scf03469_387194-393335' '(at3g22740 : 422.0) homocysteine S-methyltransferase (HMT3); homocysteine S-methyltransferase 3 (HMT3); FUNCTIONS IN: homocysteine S-methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Homocysteine S-methyltransferase (InterPro:IPR003726); BEST Arabidopsis thaliana protein match is: homocysteine methyltransferase 2 (TAIR:AT3G63250.1); Has 6696 Blast hits to 6688 proteins in 1870 species: Archae - 4; Bacteria - 4184; Metazoa - 339; Fungi - 135; Plants - 163; Viruses - 0; Other Eukaryotes - 1871 (source: NCBI BLink). & (q9fum9|hmt2_maize : 372.0) Homocysteine S-methyltransferase 2 (EC 2.1.1.10) (S-methylmethionine:homocysteine methyltransferase 2) (SMM:Hcy S-methyltransferase 2) (ZmHMT-2) - Zea mays (Maize) & (gnl|cdd|83039 : 301.0) no description available & (gnl|cdd|36792 : 279.0) no description available & (reliability: 844.0) & (original description: Putative HMT3, Description = Homocysteine S-methyltransferase 3, PFAM = PF02574)' T '13.1.3.4.12' 'amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase' 'niben101scf09903_2549-14270' '(at3g60910 : 362.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G17365.1); Has 1732 Blast hits to 1731 proteins in 520 species: Archae - 43; Bacteria - 761; Metazoa - 337; Fungi - 50; Plants - 206; Viruses - 0; Other Eukaryotes - 335 (source: NCBI BLink). & (gnl|cdd|37563 : 168.0) no description available & (reliability: 724.0) & (original description: Putative BnaCnng13390D, Description = BnaCnng13390D protein, PFAM = PF08241)' T '13.1.3.4.13' 'amino acid metabolism.synthesis.aspartate family.methionine.methionine S-methyltransferase' 'niben101scf00168_664313-671871' '(at2g43910 : 285.0) HARMLESS TO OZONE LAYER 1 (HOL1); FUNCTIONS IN: methyltransferase activity, thiopurine S-methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Thiopurine S-methyltransferase (InterPro:IPR008854); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G43920.3); Has 524 Blast hits to 523 proteins in 205 species: Archae - 0; Bacteria - 284; Metazoa - 0; Fungi - 78; Plants - 70; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (gnl|cdd|86933 : 174.0) no description available & (reliability: 570.0) & (original description: Putative TMT1, Description = Thiocyanate methyltransferase 1, PFAM = PF05724)' T '13.1.3.4.13' 'amino acid metabolism.synthesis.aspartate family.methionine.methionine S-methyltransferase' 'niben101scf00705_383321-392687' '(at5g49810 : 1560.0) Arabidopsis thaliana methionine S-methyltransferase, an enzyme that catalyzes S -methylmethionine formation.; methionine S-methyltransferase (MMT); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Methyltransferase small (InterPro:IPR007848), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9mbc2|mmt1_horvu : 1526.0) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met S-methyltransferase) (Hv-MMT1) - Hordeum vulgare (Barley) & (reliability: 3120.0) & (original description: Putative MMT1, Description = Methionine S-methyltransferase, PFAM = PF05175;PF00155)' T '13.1.3.4.1001' 'amino acid metabolism.synthesis.aspartate family.methionine' 'o-succinylhomoserine' 'amino acid synthesis.methionine' M '13.1.3.4.1002' 'amino acid metabolism.synthesis.aspartate family.methionine' 'cystathionine' 'amino acid synthesis.methionine' M '13.1.3.4.1003' 'amino acid metabolism.synthesis.aspartate family.methionine' 'methionine' 'amino acid synthesis.methionine; amino acid degradation.methionine; hormone metabolism.ethylene; C1-metabolism' M '13.1.3.5' 'amino acid metabolism.synthesis.aspartate family.lysine' '' '' '13.1.3.5.1' 'amino acid metabolism.synthesis.aspartate family.lysine.dihydrodipicolinate synthase' 'niben101scf00017_439932-444367' '(q42948|dapa_tobac : 694.0) Dihydrodipicolinate synthase, chloroplast precursor (EC 4.2.1.52) (DHDPS) - Nicotiana tabacum (Common tobacco) & (at2g45440 : 576.0) Encodes a protein that likely has dihydropicolinate synthase activity based on its mutant phenotype of decreased lysine levels and increased aspartate levels. The mutant also has increased levels of threonine. The enzyme is predicted to localize to the chloroplast.; dihydrodipicolinate synthase (DHDPS2); FUNCTIONS IN: dihydrodipicolinate synthase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate, metabolic process, diaminopimelate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Dihydrodipicolinate synthase subfamily (InterPro:IPR005263), Dihydrodipicolinate synthetase (InterPro:IPR002220), Dihydrodipicolinate synthetase, active site (InterPro:IPR020625), Dihydrodipicolinate synthetase, conserved site (InterPro:IPR020624); BEST Arabidopsis thaliana protein match is: dihydrodipicolinate synthase 1 (TAIR:AT3G60880.2); Has 13334 Blast hits to 13334 proteins in 2656 species: Archae - 353; Bacteria - 9459; Metazoa - 101; Fungi - 305; Plants - 96; Viruses - 0; Other Eukaryotes - 3020 (source: NCBI BLink). & (gnl|cdd|84962 : 346.0) no description available & (reliability: 1152.0) & (original description: Putative DHPS1, Description = 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic, PFAM = PF00701)' T '13.1.3.5.2' 'amino acid metabolism.synthesis.aspartate family.lysine.dihydrodipicolinate reductase' 'niben044scf00015495ctg011_4777-14421' '(at2g44040 : 462.0) Dihydrodipicolinate reductase, bacterial/plant; FUNCTIONS IN: dihydrodipicolinate reductase activity; INVOLVED IN: oxidation reduction, lysine biosynthetic process via diaminopimelate, metabolic process, diaminopimelate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Dihydrodipicolinate reductase, C-terminal (InterPro:IPR022663), NAD(P)-binding domain (InterPro:IPR016040), Dihydrodipicolinate reductase, plant (InterPro:IPR011859), Dihydrodipicolinate reductase, bacterial/plant (InterPro:IPR011770), Dihydrodipicolinate reductase, N-terminal (InterPro:IPR000846); BEST Arabidopsis thaliana protein match is: Dihydrodipicolinate reductase, bacterial/plant (TAIR:AT3G59890.1); Has 3366 Blast hits to 3365 proteins in 1356 species: Archae - 124; Bacteria - 2714; Metazoa - 2; Fungi - 0; Plants - 79; Viruses - 0; Other Eukaryotes - 447 (source: NCBI BLink). & (gnl|cdd|86808 : 91.0) no description available & (reliability: 924.0) & (original description: Putative DAPB1, Description = 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic, PFAM = PF05173;PF01113)' T '13.1.3.5.2' 'amino acid metabolism.synthesis.aspartate family.lysine.dihydrodipicolinate reductase' 'niben101scf00812_54915-60513' '(at5g52100 : 457.0) Is essential for chloroplast NAD(P)H dehydrogenase activity, which is involved in electron transfer between PSII and PSI. Likely functions in biogenesis or stabilization of the NAD(P)H dehydrogenase complex.; chlororespiration reduction 1 (crr1); FUNCTIONS IN: dihydrodipicolinate reductase activity; INVOLVED IN: photosynthesis, light reaction, lysine biosynthetic process via diaminopimelate; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dihydrodipicolinate reductase, C-terminal (InterPro:IPR022663), NAD(P)-binding domain (InterPro:IPR016040), Dihydrodipicolinate reductase, bacterial/plant (InterPro:IPR011770), Dihydrodipicolinate reductase, N-terminal (InterPro:IPR000846); Has 2708 Blast hits to 2708 proteins in 1059 species: Archae - 78; Bacteria - 2168; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 417 (source: NCBI BLink). & (gnl|cdd|80473 : 158.0) no description available & (reliability: 914.0) & (original description: Putative DAPB3, Description = Dihydrodipicolinate reductase-like protein CRR1, chloroplastic, PFAM = PF01113;PF05173)' T '13.1.3.5.2' 'amino acid metabolism.synthesis.aspartate family.lysine.dihydrodipicolinate reductase' 'niben101scf15156_17179-26504' '(at2g44040 : 454.0) Dihydrodipicolinate reductase, bacterial/plant; FUNCTIONS IN: dihydrodipicolinate reductase activity; INVOLVED IN: oxidation reduction, lysine biosynthetic process via diaminopimelate, metabolic process, diaminopimelate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Dihydrodipicolinate reductase, C-terminal (InterPro:IPR022663), NAD(P)-binding domain (InterPro:IPR016040), Dihydrodipicolinate reductase, plant (InterPro:IPR011859), Dihydrodipicolinate reductase, bacterial/plant (InterPro:IPR011770), Dihydrodipicolinate reductase, N-terminal (InterPro:IPR000846); BEST Arabidopsis thaliana protein match is: Dihydrodipicolinate reductase, bacterial/plant (TAIR:AT3G59890.1); Has 3366 Blast hits to 3365 proteins in 1356 species: Archae - 124; Bacteria - 2714; Metazoa - 2; Fungi - 0; Plants - 79; Viruses - 0; Other Eukaryotes - 447 (source: NCBI BLink). & (gnl|cdd|86808 : 90.7) no description available & (reliability: 908.0) & (original description: Putative DAPB1, Description = 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic, PFAM = PF01113;PF05173)' T '13.1.3.5.3' 'amino acid metabolism.synthesis.aspartate family.lysine.LL-diaminopimelic acid aminotransferase' 'nbv0.5scaffold155_843510-851753' '(at4g33680 : 249.0) Involved in disease resistance against Pseudomonas syringae. mutants have elevated SA levels, a low level of spontaneous cell death, callose deposition, and enlarged cells in leaves. genetically maps on chr 4 between L23H3 and nga1139.; ABERRANT GROWTH AND DEATH 2 (AGD2); FUNCTIONS IN: transaminase activity, copper ion binding, L,L-diaminopimelate aminotransferase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: LL-diaminopimelate aminotransferase, plant-related (InterPro:IPR019942), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: AGD2-like defense response protein 1 (TAIR:AT2G13810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82293 : 166.0) no description available & (gnl|cdd|35478 : 115.0) no description available & (reliability: 498.0) & (original description: Putative ald1, Description = LL-diaminopimelate aminotransferase, PFAM = )' T '13.1.3.5.3' 'amino acid metabolism.synthesis.aspartate family.lysine.LL-diaminopimelic acid aminotransferase' 'niben044scf00027169ctg004_1-4895' '(at4g33680 : 489.0) Involved in disease resistance against Pseudomonas syringae. mutants have elevated SA levels, a low level of spontaneous cell death, callose deposition, and enlarged cells in leaves. genetically maps on chr 4 between L23H3 and nga1139.; ABERRANT GROWTH AND DEATH 2 (AGD2); FUNCTIONS IN: transaminase activity, copper ion binding, L,L-diaminopimelate aminotransferase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: LL-diaminopimelate aminotransferase, plant-related (InterPro:IPR019942), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: AGD2-like defense response protein 1 (TAIR:AT2G13810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82293 : 373.0) no description available & (gnl|cdd|35478 : 290.0) no description available & (reliability: 978.0) & (original description: Putative ald1, Description = LL-diaminopimelate aminotransferase, PFAM = PF00155)' T '13.1.3.5.3' 'amino acid metabolism.synthesis.aspartate family.lysine.LL-diaminopimelic acid aminotransferase' 'niben101scf04547_205107-226421' '(at2g13810 : 528.0) AGD2-like defense response protein 1 (ALD1); FUNCTIONS IN: transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, transaminase activity, catalytic activity; INVOLVED IN: asparagine catabolic process, biosynthetic process, glutamate catabolic process to oxaloacetate, aspartate transamidation; LOCATED IN: chloroplast; EXPRESSED IN: sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: LL-diaminopimelate aminotransferase, plant-related (InterPro:IPR019942), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT4G33680.1); Has 32741 Blast hits to 32741 proteins in 2900 species: Archae - 975; Bacteria - 23252; Metazoa - 372; Fungi - 435; Plants - 591; Viruses - 0; Other Eukaryotes - 7116 (source: NCBI BLink). & (gnl|cdd|82293 : 472.0) no description available & (gnl|cdd|35478 : 351.0) no description available & (reliability: 1022.0) & (original description: Putative ALD1, Description = Aminotransferase ALD1, PFAM = PF00155)' T '13.1.3.5.3' 'amino acid metabolism.synthesis.aspartate family.lysine.LL-diaminopimelic acid aminotransferase' 'niben101scf09157_90466-95894' '(at4g33680 : 543.0) Involved in disease resistance against Pseudomonas syringae. mutants have elevated SA levels, a low level of spontaneous cell death, callose deposition, and enlarged cells in leaves. genetically maps on chr 4 between L23H3 and nga1139.; ABERRANT GROWTH AND DEATH 2 (AGD2); FUNCTIONS IN: transaminase activity, copper ion binding, L,L-diaminopimelate aminotransferase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: LL-diaminopimelate aminotransferase, plant-related (InterPro:IPR019942), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: AGD2-like defense response protein 1 (TAIR:AT2G13810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82293 : 408.0) no description available & (gnl|cdd|35478 : 324.0) no description available & (reliability: 1086.0) & (original description: Putative ald1, Description = LL-diaminopimelate aminotransferase, PFAM = PF00155)' T '13.1.3.5.3' 'amino acid metabolism.synthesis.aspartate family.lysine.LL-diaminopimelic acid aminotransferase' 'niben101scf10158_271683-282786' '(at4g33680 : 655.0) Involved in disease resistance against Pseudomonas syringae. mutants have elevated SA levels, a low level of spontaneous cell death, callose deposition, and enlarged cells in leaves. genetically maps on chr 4 between L23H3 and nga1139.; ABERRANT GROWTH AND DEATH 2 (AGD2); FUNCTIONS IN: transaminase activity, copper ion binding, L,L-diaminopimelate aminotransferase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: LL-diaminopimelate aminotransferase, plant-related (InterPro:IPR019942), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: AGD2-like defense response protein 1 (TAIR:AT2G13810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82293 : 475.0) no description available & (gnl|cdd|35478 : 363.0) no description available & (reliability: 1310.0) & (original description: Putative DAP, Description = LL-diaminopimelate aminotransferase, chloroplastic, PFAM = PF00155)' T '13.1.3.5.3' 'amino acid metabolism.synthesis.aspartate family.lysine.LL-diaminopimelic acid aminotransferase' 'niben101scf38634_1-793' '(at4g33680 : 83.6) Involved in disease resistance against Pseudomonas syringae. mutants have elevated SA levels, a low level of spontaneous cell death, callose deposition, and enlarged cells in leaves. genetically maps on chr 4 between L23H3 and nga1139.; ABERRANT GROWTH AND DEATH 2 (AGD2); FUNCTIONS IN: transaminase activity, copper ion binding, L,L-diaminopimelate aminotransferase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: LL-diaminopimelate aminotransferase, plant-related (InterPro:IPR019942), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: AGD2-like defense response protein 1 (TAIR:AT2G13810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative ald1, Description = LL-diaminopimelate aminotransferase, PFAM = )' T '13.1.3.5.4' 'amino acid metabolism.synthesis.aspartate family.lysine.diaminopimelate epimerase' 'nbv0.3scaffold32222_6850-20022' '(at3g53580 : 498.0) diaminopimelate epimerase family protein; FUNCTIONS IN: diaminopimelate epimerase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Diaminopimelate epimerase, active site (InterPro:IPR018510), Diaminopimelate epimerase (InterPro:IPR001653); Has 7123 Blast hits to 7119 proteins in 2112 species: Archae - 88; Bacteria - 4300; Metazoa - 6; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 2667 (source: NCBI BLink). & (gnl|cdd|80674 : 341.0) no description available & (reliability: 996.0) & (original description: Putative DAPF, Description = Diaminopimelate epimerase, chloroplastic, PFAM = PF01678;PF01678)' T '13.1.3.5.4' 'amino acid metabolism.synthesis.aspartate family.lysine.diaminopimelate epimerase' 'niben101scf00067_215208-226025' '(at3g53580 : 490.0) diaminopimelate epimerase family protein; FUNCTIONS IN: diaminopimelate epimerase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Diaminopimelate epimerase, active site (InterPro:IPR018510), Diaminopimelate epimerase (InterPro:IPR001653); Has 7123 Blast hits to 7119 proteins in 2112 species: Archae - 88; Bacteria - 4300; Metazoa - 6; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 2667 (source: NCBI BLink). & (gnl|cdd|80674 : 342.0) no description available & (reliability: 980.0) & (original description: Putative DAPF, Description = Diaminopimelate epimerase, chloroplastic, PFAM = PF01678;PF01678)' T '13.1.3.5.4' 'amino acid metabolism.synthesis.aspartate family.lysine.diaminopimelate epimerase' 'niben101scf01444_211575-228203' '(at3g53580 : 483.0) diaminopimelate epimerase family protein; FUNCTIONS IN: diaminopimelate epimerase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Diaminopimelate epimerase, active site (InterPro:IPR018510), Diaminopimelate epimerase (InterPro:IPR001653); Has 7123 Blast hits to 7119 proteins in 2112 species: Archae - 88; Bacteria - 4300; Metazoa - 6; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 2667 (source: NCBI BLink). & (gnl|cdd|80674 : 341.0) no description available & (reliability: 966.0) & (original description: Putative DAPF, Description = Diaminopimelate epimerase, chloroplastic, PFAM = PF01678;PF01678)' T '13.1.3.5.5' 'amino acid metabolism.synthesis.aspartate family.lysine.diaminopimelate decarboxylase' 'nbv0.5scaffold3331_245168-251334' '(at3g14390 : 624.0) Pyridoxal-dependent decarboxylase family protein; FUNCTIONS IN: diaminopimelate decarboxylase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate; LOCATED IN: chloroplast; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Alanine racemase/group IV decarboxylase, C-terminal (InterPro:IPR009006), Ornithine/DAP/Arg decarboxylase (InterPro:IPR000183), Orn/DAP/Arg decarboxylase 2, N-terminal (InterPro:IPR022644), Orn/DAP/Arg decarboxylase 2, C-terminal (InterPro:IPR022643), Diaminopimelate decarboxylase (InterPro:IPR002986), Orn/DAP/Arg decarboxylase 2, conserved site (InterPro:IPR022657), Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site (InterPro:IPR022653); BEST Arabidopsis thaliana protein match is: Pyridoxal-dependent decarboxylase family protein (TAIR:AT5G11880.1); Has 13020 Blast hits to 12980 proteins in 2586 species: Archae - 150; Bacteria - 7800; Metazoa - 435; Fungi - 194; Plants - 400; Viruses - 27; Other Eukaryotes - 4014 (source: NCBI BLink). & (gnl|cdd|35841 : 303.0) no description available & (gnl|cdd|30369 : 251.0) no description available & (reliability: 1248.0) & (original description: Putative dpd1, Description = Diaminopimelate decarboxylase, PFAM = PF00278;PF02784)' T '13.1.3.5.5' 'amino acid metabolism.synthesis.aspartate family.lysine.diaminopimelate decarboxylase' 'niben101scf00202_506433-521014' '(at3g14390 : 823.0) Pyridoxal-dependent decarboxylase family protein; FUNCTIONS IN: diaminopimelate decarboxylase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate; LOCATED IN: chloroplast; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Alanine racemase/group IV decarboxylase, C-terminal (InterPro:IPR009006), Ornithine/DAP/Arg decarboxylase (InterPro:IPR000183), Orn/DAP/Arg decarboxylase 2, N-terminal (InterPro:IPR022644), Orn/DAP/Arg decarboxylase 2, C-terminal (InterPro:IPR022643), Diaminopimelate decarboxylase (InterPro:IPR002986), Orn/DAP/Arg decarboxylase 2, conserved site (InterPro:IPR022657), Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site (InterPro:IPR022653); BEST Arabidopsis thaliana protein match is: Pyridoxal-dependent decarboxylase family protein (TAIR:AT5G11880.1); Has 13020 Blast hits to 12980 proteins in 2586 species: Archae - 150; Bacteria - 7800; Metazoa - 435; Fungi - 194; Plants - 400; Viruses - 27; Other Eukaryotes - 4014 (source: NCBI BLink). & (gnl|cdd|35841 : 415.0) no description available & (gnl|cdd|30369 : 323.0) no description available & (reliability: 1646.0) & (original description: Putative LYSA2, Description = Diaminopimelate decarboxylase 2, chloroplastic, PFAM = PF02784;PF00278)' T '13.1.3.5.5' 'amino acid metabolism.synthesis.aspartate family.lysine.diaminopimelate decarboxylase' 'niben101scf08137_213032-216225' '(q8s3n2|dcor_capan : 383.0) Ornithine decarboxylase (EC 4.1.1.17) (ODC) (CaODC1) (CapODC) - Capsicum annuum (Bell pepper) & (gnl|cdd|35841 : 348.0) no description available & (gnl|cdd|30369 : 239.0) no description available & (at5g11880 : 102.0) Pyridoxal-dependent decarboxylase family protein; FUNCTIONS IN: diaminopimelate decarboxylase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate; LOCATED IN: chloroplast; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Alanine racemase/group IV decarboxylase, C-terminal (InterPro:IPR009006), Ornithine/DAP/Arg decarboxylase (InterPro:IPR000183), Orn/DAP/Arg decarboxylase 2, N-terminal (InterPro:IPR022644), Orn/DAP/Arg decarboxylase 2, C-terminal (InterPro:IPR022643), Diaminopimelate decarboxylase (InterPro:IPR002986), Orn/DAP/Arg decarboxylase 2, conserved site (InterPro:IPR022657), Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site (InterPro:IPR022653); BEST Arabidopsis thaliana protein match is: Pyridoxal-dependent decarboxylase family protein (TAIR:AT3G14390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative odc2, Description = Ornithine decarboxylase 2, PFAM = PF00278;PF02784)' T '13.1.3.5.6' 'amino acid metabolism.synthesis.aspartate family.lysine.2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase' '' '' '13.1.3.5.7' 'amino acid metabolism.synthesis.aspartate family.lysine.tetrahydrodipicolinate N-acetyltransferase' '' '' '13.1.3.5.8' 'amino acid metabolism.synthesis.aspartate family.lysine.N-acyl-l-2-amino-6-oxopimelate aminotransferase' '' '' '13.1.3.5.9' 'amino acid metabolism.synthesis.aspartate family.lysine.N-acyl-ll-2,6-diaminopimelate deacylase' '' '' '13.1.3.5.10' 'amino acid metabolism.synthesis.aspartate family.lysine.diaminopimelate dehydrogenase' '' '' '13.1.3.5.1001' 'amino acid metabolism.synthesis.aspartate family.lysine' 'lysine' 'amino acid synthesis.lysine; amino acid degradation.lysine; polyamine metabolism' M '13.1.3.6' 'amino acid metabolism.synthesis.aspartate family.misc' '' '' '13.1.3.6.1' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine' '' '' '13.1.3.6.1.1' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.aspartate kinase' 'nbv0.5scaffold854_222866-227381' '(at3g02020 : 487.0) encodes a monofunctional aspartate kinase; aspartate kinase 3 (AK3); CONTAINS InterPro DOMAIN/s: Aspartate kinase, conserved site (InterPro:IPR018042), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Amino acid-binding ACT (InterPro:IPR002912), Aspartate kinase domain (InterPro:IPR001341); BEST Arabidopsis thaliana protein match is: Aspartate kinase family protein (TAIR:AT5G14060.2); Has 11044 Blast hits to 11020 proteins in 2545 species: Archae - 256; Bacteria - 7570; Metazoa - 4; Fungi - 149; Plants - 183; Viruses - 0; Other Eukaryotes - 2882 (source: NCBI BLink). & (gnl|cdd|35677 : 464.0) no description available & (gnl|cdd|30873 : 248.0) no description available & (p49080|akh2_maize : 137.0) Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplast precursor (AK-HD 2) (AK-HSDH 2) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] - Zea mays (Maize) & (reliability: 974.0) & (original description: Putative lysC, Description = Aspartokinase, PFAM = PF00696)' T '13.1.3.6.1.1' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.aspartate kinase' 'niben044scf00014538ctg002_9303-15921' '(at5g14060 : 794.0) lysine-sensitive aspartate kinase; CARAB-AK-LYS; FUNCTIONS IN: amino acid binding, aspartate kinase activity; INVOLVED IN: aspartate family amino acid biosynthetic process; CONTAINS InterPro DOMAIN/s: Aspartate kinase, conserved site (InterPro:IPR018042), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Amino acid-binding ACT (InterPro:IPR002912), Aspartate kinase domain (InterPro:IPR001341); BEST Arabidopsis thaliana protein match is: aspartate kinase 3 (TAIR:AT3G02020.1); Has 11053 Blast hits to 11025 proteins in 2540 species: Archae - 202; Bacteria - 7605; Metazoa - 4; Fungi - 146; Plants - 183; Viruses - 0; Other Eukaryotes - 2913 (source: NCBI BLink). & (gnl|cdd|35677 : 742.0) no description available & (gnl|cdd|58610 : 417.0) no description available & (p49079|akh1_maize : 184.0) Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplast precursor (AK-HD 1) (AK-HSDH 1) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] - Zea mays (Maize) & (reliability: 1588.0) & (original description: Putative AK2, Description = Aspartokinase 2, chloroplastic, PFAM = PF00696)' T '13.1.3.6.1.1' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.aspartate kinase' 'niben044scf00015664ctg006_1-1808' '(p37142|akh_dauca : 187.0) Bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor (AK-HD) (AK-HSDH) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] (Fragment) - Daucus carota (Carrot) & (at1g31230 : 185.0) Encodes a bifunctional aspartate kinase/homoserine dehydrogenase. These two activities catalyze the first and the third steps toward the synthesis of the essential amino acids threonine, isoleucine and methionine.; aspartate kinase-homoserine dehydrogenase i (AK-HSDH I); FUNCTIONS IN: homoserine dehydrogenase activity, aspartate kinase activity; INVOLVED IN: aspartate family amino acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Homoserine dehydrogenase, catalytic (InterPro:IPR001342), Amino acid-binding ACT (InterPro:IPR002912), Aspartate/homoserine dehydrogenase, NAD-binding (InterPro:IPR005106), Aspartate kinase, conserved site (InterPro:IPR018042), Bifunctional aspartokinase/homoserine dehydrogenase I (InterPro:IPR011147), NAD(P)-binding domain (InterPro:IPR016040), Aspartate kinase domain (InterPro:IPR001341), Homoserine dehydrogenase, conserved site (InterPro:IPR019811); BEST Arabidopsis thaliana protein match is: aspartate kinase-homoserine dehydrogenase ii (TAIR:AT4G19710.2); Has 17266 Blast hits to 16993 proteins in 2572 species: Archae - 397; Bacteria - 11403; Metazoa - 7; Fungi - 300; Plants - 257; Viruses - 0; Other Eukaryotes - 4902 (source: NCBI BLink). & (gnl|cdd|35676 : 123.0) no description available & (gnl|cdd|83022 : 93.0) no description available & (reliability: 370.0) & (original description: Putative ahd1, Description = Homoserine dehydrogenase, PFAM = PF00742)' T '13.1.3.6.1.1' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.aspartate kinase' 'niben044scf00015664ctg010_1-4233' '(at1g31230 : 373.0) Encodes a bifunctional aspartate kinase/homoserine dehydrogenase. These two activities catalyze the first and the third steps toward the synthesis of the essential amino acids threonine, isoleucine and methionine.; aspartate kinase-homoserine dehydrogenase i (AK-HSDH I); FUNCTIONS IN: homoserine dehydrogenase activity, aspartate kinase activity; INVOLVED IN: aspartate family amino acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Homoserine dehydrogenase, catalytic (InterPro:IPR001342), Amino acid-binding ACT (InterPro:IPR002912), Aspartate/homoserine dehydrogenase, NAD-binding (InterPro:IPR005106), Aspartate kinase, conserved site (InterPro:IPR018042), Bifunctional aspartokinase/homoserine dehydrogenase I (InterPro:IPR011147), NAD(P)-binding domain (InterPro:IPR016040), Aspartate kinase domain (InterPro:IPR001341), Homoserine dehydrogenase, conserved site (InterPro:IPR019811); BEST Arabidopsis thaliana protein match is: aspartate kinase-homoserine dehydrogenase ii (TAIR:AT4G19710.2); Has 17266 Blast hits to 16993 proteins in 2572 species: Archae - 397; Bacteria - 11403; Metazoa - 7; Fungi - 300; Plants - 257; Viruses - 0; Other Eukaryotes - 4902 (source: NCBI BLink). & (p49080|akh2_maize : 369.0) Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplast precursor (AK-HD 2) (AK-HSDH 2) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] - Zea mays (Maize) & (gnl|cdd|82998 : 243.0) no description available & (gnl|cdd|35676 : 183.0) no description available & (reliability: 746.0) & (original description: Putative ahd1, Description = Aspartate kinase, PFAM = PF03447;PF00742)' T '13.1.3.6.1.1' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.aspartate kinase' 'niben101scf00927_257827-288067' '(at5g13280 : 782.0) Asp kinase inhibited by Lys and S-adenosylmethionine. Contains regulatory domains that belong to the ACT domain family, which allow binding to a extreme variety of ligands. Can function as a monomer or as a dimer with acetohydroxyacid synthase (HSDH).; aspartate kinase 1 (AK-LYS1); FUNCTIONS IN: aspartate kinase activity; INVOLVED IN: cellular amino acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate kinase, conserved site (InterPro:IPR018042), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Amino acid-binding ACT (InterPro:IPR002912), Aspartate kinase domain (InterPro:IPR001341); BEST Arabidopsis thaliana protein match is: aspartate kinase 3 (TAIR:AT3G02020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35677 : 737.0) no description available & (gnl|cdd|58610 : 414.0) no description available & (p49079|akh1_maize : 178.0) Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplast precursor (AK-HD 1) (AK-HSDH 1) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] - Zea mays (Maize) & (reliability: 1564.0) & (original description: Putative AK2, Description = Aspartokinase 2, chloroplastic, PFAM = PF00696)' T '13.1.3.6.1.1' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.aspartate kinase' 'niben101scf06848_46721-61622' '(p37142|akh_dauca : 1439.0) Bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor (AK-HD) (AK-HSDH) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] (Fragment) - Daucus carota (Carrot) & (at4g19710 : 1410.0) Encodes a bifunctional aspartate kinase/homoserine dehydrogenase. These two activities catalyze the first and the third steps toward the synthesis of the essential amino acids threonine, isoleucine and methionine.; aspartate kinase-homoserine dehydrogenase ii (AK-HSDH II); FUNCTIONS IN: homoserine dehydrogenase activity, aspartate kinase activity; INVOLVED IN: aspartate family amino acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Homoserine dehydrogenase, catalytic (InterPro:IPR001342), Amino acid-binding ACT (InterPro:IPR002912), Aspartate/homoserine dehydrogenase, NAD-binding (InterPro:IPR005106), Aspartate kinase, conserved site (InterPro:IPR018042), NAD(P)-binding domain (InterPro:IPR016040), Aspartate kinase domain (InterPro:IPR001341), Bifunctional aspartokinase/homoserine dehydrogenase I (InterPro:IPR011147), Homoserine dehydrogenase, conserved site (InterPro:IPR019811); BEST Arabidopsis thaliana protein match is: aspartate kinase-homoserine dehydrogenase i (TAIR:AT1G31230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|82998 : 715.0) no description available & (gnl|cdd|35676 : 321.0) no description available & (reliability: 2780.0) & (original description: Putative ahd1, Description = Aspartate kinase, PFAM = PF13840;PF00742;PF03447;PF01842;PF00696)' T '13.1.3.6.1.2' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.aspartate semialdehyde dehydrogenase' 'niben044scf00014538ctg001_3648-6188' '(at1g14810 : 242.0) encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis; semialdehyde dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, aspartate-semialdehyde dehydrogenase activity; INVOLVED IN: cellular amino acid biosynthetic process, oxidation reduction, threonine biosynthetic process, methionine biosynthetic process, cellular amino acid metabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Semialdehyde dehydrogenase, dimerisation domain (InterPro:IPR012280), Semialdehyde dehydrogenase, NAD-binding (InterPro:IPR000534), Aspartate-semialdehyde dehydrogenase, bacterial (InterPro:IPR005986), Aspartate-semialdehyde dehydrogenase (InterPro:IPR012080); Has 10268 Blast hits to 10266 proteins in 2514 species: Archae - 260; Bacteria - 6386; Metazoa - 3; Fungi - 175; Plants - 61; Viruses - 0; Other Eukaryotes - 3383 (source: NCBI BLink). & (gnl|cdd|39974 : 179.0) no description available & (gnl|cdd|81990 : 177.0) no description available & (reliability: 484.0) & (original description: Putative asd, Description = ASA dehydrogenase, PFAM = PF01118)' T '13.1.3.6.1.2' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.aspartate semialdehyde dehydrogenase' 'niben044scf00038253ctg003_292-6349' '(at1g14810 : 540.0) encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis; semialdehyde dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, aspartate-semialdehyde dehydrogenase activity; INVOLVED IN: cellular amino acid biosynthetic process, oxidation reduction, threonine biosynthetic process, methionine biosynthetic process, cellular amino acid metabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Semialdehyde dehydrogenase, dimerisation domain (InterPro:IPR012280), Semialdehyde dehydrogenase, NAD-binding (InterPro:IPR000534), Aspartate-semialdehyde dehydrogenase, bacterial (InterPro:IPR005986), Aspartate-semialdehyde dehydrogenase (InterPro:IPR012080); Has 10268 Blast hits to 10266 proteins in 2514 species: Archae - 260; Bacteria - 6386; Metazoa - 3; Fungi - 175; Plants - 61; Viruses - 0; Other Eukaryotes - 3383 (source: NCBI BLink). & (gnl|cdd|39974 : 410.0) no description available & (gnl|cdd|81990 : 391.0) no description available & (reliability: 1080.0) & (original description: Putative asd, Description = Aspartate-semialdehyde dehydrogenase, PFAM = PF02774;PF01118)' T '13.1.3.6.1.2' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.aspartate semialdehyde dehydrogenase' 'niben101scf02114_50443-53030' '(at1g14810 : 239.0) encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis; semialdehyde dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, aspartate-semialdehyde dehydrogenase activity; INVOLVED IN: cellular amino acid biosynthetic process, oxidation reduction, threonine biosynthetic process, methionine biosynthetic process, cellular amino acid metabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Semialdehyde dehydrogenase, dimerisation domain (InterPro:IPR012280), Semialdehyde dehydrogenase, NAD-binding (InterPro:IPR000534), Aspartate-semialdehyde dehydrogenase, bacterial (InterPro:IPR005986), Aspartate-semialdehyde dehydrogenase (InterPro:IPR012080); Has 10268 Blast hits to 10266 proteins in 2514 species: Archae - 260; Bacteria - 6386; Metazoa - 3; Fungi - 175; Plants - 61; Viruses - 0; Other Eukaryotes - 3383 (source: NCBI BLink). & (gnl|cdd|39974 : 176.0) no description available & (gnl|cdd|81990 : 173.0) no description available & (reliability: 478.0) & (original description: Putative asd, Description = ASA dehydrogenase, PFAM = PF01118)' T '13.1.3.6.1.3' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.homoserine dehydrogenase' 'niben101scf01383_539781-564531' '(at5g21060 : 508.0) Glyceraldehyde-3-phosphate dehydrogenase-like family protein; FUNCTIONS IN: homoserine dehydrogenase activity; INVOLVED IN: cellular amino acid biosynthetic process, aspartate family amino acid biosynthetic process, cellular amino acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homoserine dehydrogenase, short (InterPro:IPR022697), Homoserine dehydrogenase, catalytic (InterPro:IPR001342), Homoserine dehydrogenase, conserved site (InterPro:IPR019811); BEST Arabidopsis thaliana protein match is: aspartate kinase-homoserine dehydrogenase i (TAIR:AT1G31230.1); Has 7513 Blast hits to 7513 proteins in 2318 species: Archae - 181; Bacteria - 5355; Metazoa - 3; Fungi - 163; Plants - 133; Viruses - 0; Other Eukaryotes - 1678 (source: NCBI BLink). & (gnl|cdd|35676 : 411.0) no description available & (gnl|cdd|82998 : 258.0) no description available & (p37142|akh_dauca : 167.0) Bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor (AK-HD) (AK-HSDH) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] (Fragment) - Daucus carota (Carrot) & (reliability: 1016.0) & (original description: Putative hom, Description = Homoserine dehydrogenase, PFAM = PF00742)' T '13.1.3.6.1.4' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.homoserine kinase' 'nbv0.3scaffold8467_10364-12860' '(at2g17265 : 415.0) Encodes a homoserine kinase (HSK) which produces O-phospho-L-homoserine (HserP), a compound at the branching point of methionine and threonine biosynthesis. HSK is found in the stromal fraction of chloroplasts. Mutants are susceptible to downy mildew fungus Hyaloperonospora parasitica.; homoserine kinase (HSK); FUNCTIONS IN: homoserine kinase activity; INVOLVED IN: methionine biosynthetic process, threonine biosynthetic process, response to fungus, response to bacterium; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GHMP kinase, ATP-binding, conserved site (InterPro:IPR006203), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Homoserine kinase (InterPro:IPR000870), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: homoserine kinase, putative / HSK, putative (TAIR:AT4G35295.1); Has 6092 Blast hits to 6088 proteins in 1935 species: Archae - 296; Bacteria - 4868; Metazoa - 7; Fungi - 124; Plants - 47; Viruses - 0; Other Eukaryotes - 750 (source: NCBI BLink). & (gnl|cdd|36750 : 318.0) no description available & (gnl|cdd|80839 : 239.0) no description available & (reliability: 830.0) & (original description: Putative HSK, Description = Homoserine kinase, PFAM = PF00288;PF08544)' T '13.1.3.6.1.4' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.homoserine kinase' 'niben101scf12011_69446-72944' '(at2g17265 : 409.0) Encodes a homoserine kinase (HSK) which produces O-phospho-L-homoserine (HserP), a compound at the branching point of methionine and threonine biosynthesis. HSK is found in the stromal fraction of chloroplasts. Mutants are susceptible to downy mildew fungus Hyaloperonospora parasitica.; homoserine kinase (HSK); FUNCTIONS IN: homoserine kinase activity; INVOLVED IN: methionine biosynthetic process, threonine biosynthetic process, response to fungus, response to bacterium; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GHMP kinase, ATP-binding, conserved site (InterPro:IPR006203), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Homoserine kinase (InterPro:IPR000870), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: homoserine kinase, putative / HSK, putative (TAIR:AT4G35295.1); Has 6092 Blast hits to 6088 proteins in 1935 species: Archae - 296; Bacteria - 4868; Metazoa - 7; Fungi - 124; Plants - 47; Viruses - 0; Other Eukaryotes - 750 (source: NCBI BLink). & (gnl|cdd|36750 : 305.0) no description available & (gnl|cdd|80839 : 243.0) no description available & (reliability: 818.0) & (original description: Putative HSK, Description = Homoserine kinase, PFAM = PF00288;PF08544)' T '13.1.3.6.1.10' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.bifunctional aspartate kinase/homoserine dehydrogenase' 'niben044scf00015664ctg006_1-1808' '(p37142|akh_dauca : 187.0) Bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor (AK-HD) (AK-HSDH) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] (Fragment) - Daucus carota (Carrot) & (at1g31230 : 185.0) Encodes a bifunctional aspartate kinase/homoserine dehydrogenase. These two activities catalyze the first and the third steps toward the synthesis of the essential amino acids threonine, isoleucine and methionine.; aspartate kinase-homoserine dehydrogenase i (AK-HSDH I); FUNCTIONS IN: homoserine dehydrogenase activity, aspartate kinase activity; INVOLVED IN: aspartate family amino acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Homoserine dehydrogenase, catalytic (InterPro:IPR001342), Amino acid-binding ACT (InterPro:IPR002912), Aspartate/homoserine dehydrogenase, NAD-binding (InterPro:IPR005106), Aspartate kinase, conserved site (InterPro:IPR018042), Bifunctional aspartokinase/homoserine dehydrogenase I (InterPro:IPR011147), NAD(P)-binding domain (InterPro:IPR016040), Aspartate kinase domain (InterPro:IPR001341), Homoserine dehydrogenase, conserved site (InterPro:IPR019811); BEST Arabidopsis thaliana protein match is: aspartate kinase-homoserine dehydrogenase ii (TAIR:AT4G19710.2); Has 17266 Blast hits to 16993 proteins in 2572 species: Archae - 397; Bacteria - 11403; Metazoa - 7; Fungi - 300; Plants - 257; Viruses - 0; Other Eukaryotes - 4902 (source: NCBI BLink). & (gnl|cdd|35676 : 123.0) no description available & (gnl|cdd|83022 : 93.0) no description available & (reliability: 352.0) & (original description: Putative ahd1, Description = Homoserine dehydrogenase, PFAM = PF00742)' T '13.1.3.6.1.10' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.bifunctional aspartate kinase/homoserine dehydrogenase' 'niben044scf00015664ctg010_1-4233' '(at1g31230 : 373.0) Encodes a bifunctional aspartate kinase/homoserine dehydrogenase. These two activities catalyze the first and the third steps toward the synthesis of the essential amino acids threonine, isoleucine and methionine.; aspartate kinase-homoserine dehydrogenase i (AK-HSDH I); FUNCTIONS IN: homoserine dehydrogenase activity, aspartate kinase activity; INVOLVED IN: aspartate family amino acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Homoserine dehydrogenase, catalytic (InterPro:IPR001342), Amino acid-binding ACT (InterPro:IPR002912), Aspartate/homoserine dehydrogenase, NAD-binding (InterPro:IPR005106), Aspartate kinase, conserved site (InterPro:IPR018042), Bifunctional aspartokinase/homoserine dehydrogenase I (InterPro:IPR011147), NAD(P)-binding domain (InterPro:IPR016040), Aspartate kinase domain (InterPro:IPR001341), Homoserine dehydrogenase, conserved site (InterPro:IPR019811); BEST Arabidopsis thaliana protein match is: aspartate kinase-homoserine dehydrogenase ii (TAIR:AT4G19710.2); Has 17266 Blast hits to 16993 proteins in 2572 species: Archae - 397; Bacteria - 11403; Metazoa - 7; Fungi - 300; Plants - 257; Viruses - 0; Other Eukaryotes - 4902 (source: NCBI BLink). & (p49080|akh2_maize : 369.0) Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplast precursor (AK-HD 2) (AK-HSDH 2) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] - Zea mays (Maize) & (gnl|cdd|82998 : 243.0) no description available & (gnl|cdd|35676 : 183.0) no description available & (reliability: 742.0) & (original description: Putative ahd1, Description = Aspartate kinase, PFAM = PF03447;PF00742)' T '13.1.3.6.1.10' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.bifunctional aspartate kinase/homoserine dehydrogenase' 'niben101scf06848_46721-61622' '(p37142|akh_dauca : 1439.0) Bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor (AK-HD) (AK-HSDH) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] (Fragment) - Daucus carota (Carrot) & (at4g19710 : 1410.0) Encodes a bifunctional aspartate kinase/homoserine dehydrogenase. These two activities catalyze the first and the third steps toward the synthesis of the essential amino acids threonine, isoleucine and methionine.; aspartate kinase-homoserine dehydrogenase ii (AK-HSDH II); FUNCTIONS IN: homoserine dehydrogenase activity, aspartate kinase activity; INVOLVED IN: aspartate family amino acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Homoserine dehydrogenase, catalytic (InterPro:IPR001342), Amino acid-binding ACT (InterPro:IPR002912), Aspartate/homoserine dehydrogenase, NAD-binding (InterPro:IPR005106), Aspartate kinase, conserved site (InterPro:IPR018042), NAD(P)-binding domain (InterPro:IPR016040), Aspartate kinase domain (InterPro:IPR001341), Bifunctional aspartokinase/homoserine dehydrogenase I (InterPro:IPR011147), Homoserine dehydrogenase, conserved site (InterPro:IPR019811); BEST Arabidopsis thaliana protein match is: aspartate kinase-homoserine dehydrogenase i (TAIR:AT1G31230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|82998 : 715.0) no description available & (gnl|cdd|35676 : 321.0) no description available & (reliability: 2820.0) & (original description: Putative ahd1, Description = Aspartate kinase, PFAM = PF13840;PF00742;PF03447;PF01842;PF00696)' T '13.1.3.6.1.1001' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine' 'homoserine' 'amino acid synthesis.homoserine; amino acid degradation.homoserine; amino acid synthesis.methionine; amino acid degradation.methionine; amino acid metabolism.threonine; amino acid synthesis.threonine' M '13.1.3.6.2' 'amino acid metabolism.synthesis.aspartate family.misc.homocysteine' '' '' '13.1.3.6.2.1001' 'amino acid metabolism.synthesis.aspartate family.misc.homocysteine' 'homocysteine' 'amino acid synthesis.homocysteine' M '13.1.4' 'amino acid metabolism.synthesis.branched chain group' '' '' '13.1.4.1' 'amino acid metabolism.synthesis.branched chain group.common' '' '' '13.1.4.1.1' 'amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase' 'nbv0.3scaffold11164_1054-9910' '(at5g16290 : 446.0) VALINE-TOLERANT 1 (VAT1); FUNCTIONS IN: acetolactate synthase activity, amino acid binding; INVOLVED IN: branched chain family amino acid biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetolactate synthase, small subunit (InterPro:IPR004789), Amino acid-binding ACT (InterPro:IPR002912), Acetolactate synthase, small subunit, C-terminal (InterPro:IPR019455); BEST Arabidopsis thaliana protein match is: ACT domain-containing small subunit of acetolactate synthase protein (TAIR:AT2G31810.1); Has 12638 Blast hits to 6503 proteins in 1982 species: Archae - 228; Bacteria - 7917; Metazoa - 4; Fungi - 260; Plants - 116; Viruses - 0; Other Eukaryotes - 4113 (source: NCBI BLink). & (gnl|cdd|37874 : 263.0) no description available & (gnl|cdd|84024 : 195.0) no description available & (reliability: 892.0) & (original description: Putative ilvH, Description = Acetolactate synthase, small subunit, PFAM = PF13710;PF01842;PF10369)' T '13.1.4.1.1' 'amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase' 'nbv0.3scaffold11164_1056-12695' '(at2g31810 : 600.0) ACT domain-containing small subunit of acetolactate synthase protein; FUNCTIONS IN: acetolactate synthase activity, amino acid binding; INVOLVED IN: branched chain family amino acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetolactate synthase, small subunit (InterPro:IPR004789), Amino acid-binding ACT (InterPro:IPR002912), Acetolactate synthase, small subunit, C-terminal (InterPro:IPR019455); BEST Arabidopsis thaliana protein match is: VALINE-TOLERANT 1 (TAIR:AT5G16290.2); Has 11866 Blast hits to 6122 proteins in 1974 species: Archae - 228; Bacteria - 7362; Metazoa - 4; Fungi - 258; Plants - 114; Viruses - 0; Other Eukaryotes - 3900 (source: NCBI BLink). & (gnl|cdd|37874 : 259.0) no description available & (gnl|cdd|84024 : 194.0) no description available & (reliability: 1200.0) & (original description: Putative VAT1, Description = Acetolactate synthase small subunit 1, chloroplastic, PFAM = PF10369;PF10369;PF13710;PF01842)' T '13.1.4.1.1' 'amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase' 'nbv0.3scaffold48079_1487-5499' '(p09342|ilv1_tobac : 1217.0) Acetolactate synthase 1, chloroplast precursor (EC 2.2.1.6) (Acetolactate synthase I) (Acetohydroxy-acid synthase I) (ALS I) - Nicotiana tabacum (Common tobacco) & (at3g48560 : 1026.0) Catalyzes the formation of acetolactate from pyruvate, the first step in valine and isoleucine biosynthesis. Requires FAD, thiamine pyrophosphate and Mg. Inhibited by the sulphonylurea herbicide, chlorsulphuron, and the imidazolinone herbicide, imazapyr. The obtained crystal structure of acetohydroxyacid synthase AHAS, EC 2.2.1.6)in complex with herbicides of the sulphonylurea and imidazolinone family reveals the molecular basis for substrate/inhibitor binding.; chlorsulfuron/imidazolinone resistant 1 (CSR1); FUNCTIONS IN: acetolactate synthase activity, pyruvate decarboxylase activity; INVOLVED IN: branched chain family amino acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Acetolactate synthase, large subunit, biosynthetic (InterPro:IPR012846), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein (TAIR:AT5G17380.1); Has 30963 Blast hits to 30605 proteins in 2694 species: Archae - 488; Bacteria - 17421; Metazoa - 266; Fungi - 871; Plants - 599; Viruses - 25; Other Eukaryotes - 11293 (source: NCBI BLink). & (gnl|cdd|39368 : 837.0) no description available & (gnl|cdd|82763 : 633.0) no description available & (reliability: 2052.0) & (original description: Putative als, Description = Acetolactate synthase, PFAM = PF02776;PF00205;PF02775)' T '13.1.4.1.1' 'amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase' 'nbv0.3scaffold55222_3267-8333' '(at5g16290 : 216.0) VALINE-TOLERANT 1 (VAT1); FUNCTIONS IN: acetolactate synthase activity, amino acid binding; INVOLVED IN: branched chain family amino acid biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetolactate synthase, small subunit (InterPro:IPR004789), Amino acid-binding ACT (InterPro:IPR002912), Acetolactate synthase, small subunit, C-terminal (InterPro:IPR019455); BEST Arabidopsis thaliana protein match is: ACT domain-containing small subunit of acetolactate synthase protein (TAIR:AT2G31810.1); Has 12638 Blast hits to 6503 proteins in 1982 species: Archae - 228; Bacteria - 7917; Metazoa - 4; Fungi - 260; Plants - 116; Viruses - 0; Other Eukaryotes - 4113 (source: NCBI BLink). & (gnl|cdd|37874 : 170.0) no description available & (gnl|cdd|84024 : 163.0) no description available & (reliability: 432.0) & (original description: Putative ilvH, Description = Acetolactate synthase, small subunit, PFAM = PF01842;PF10369)' T '13.1.4.1.1' 'amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase' 'nbv0.3scaffold61937_4283-9238' '(p09342|ilv1_tobac : 1097.0) Acetolactate synthase 1, chloroplast precursor (EC 2.2.1.6) (Acetolactate synthase I) (Acetohydroxy-acid synthase I) (ALS I) - Nicotiana tabacum (Common tobacco) & (at3g48560 : 992.0) Catalyzes the formation of acetolactate from pyruvate, the first step in valine and isoleucine biosynthesis. Requires FAD, thiamine pyrophosphate and Mg. Inhibited by the sulphonylurea herbicide, chlorsulphuron, and the imidazolinone herbicide, imazapyr. The obtained crystal structure of acetohydroxyacid synthase AHAS, EC 2.2.1.6)in complex with herbicides of the sulphonylurea and imidazolinone family reveals the molecular basis for substrate/inhibitor binding.; chlorsulfuron/imidazolinone resistant 1 (CSR1); FUNCTIONS IN: acetolactate synthase activity, pyruvate decarboxylase activity; INVOLVED IN: branched chain family amino acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Acetolactate synthase, large subunit, biosynthetic (InterPro:IPR012846), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein (TAIR:AT5G17380.1); Has 30963 Blast hits to 30605 proteins in 2694 species: Archae - 488; Bacteria - 17421; Metazoa - 266; Fungi - 871; Plants - 599; Viruses - 25; Other Eukaryotes - 11293 (source: NCBI BLink). & (gnl|cdd|39368 : 815.0) no description available & (gnl|cdd|82763 : 627.0) no description available & (reliability: 1984.0) & (original description: Putative als, Description = Acetolactate synthase, PFAM = PF02776;PF02775;PF00205)' T '13.1.4.1.1' 'amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase' 'niben101scf05032_29504-33501' '(p09114|ilv2_tobac : 1233.0) Acetolactate synthase 2, chloroplast precursor (EC 2.2.1.6) (Acetolactate synthase II) (Acetohydroxy-acid synthase II) (ALS II) - Nicotiana tabacum (Common tobacco) & (at3g48560 : 1013.0) Catalyzes the formation of acetolactate from pyruvate, the first step in valine and isoleucine biosynthesis. Requires FAD, thiamine pyrophosphate and Mg. Inhibited by the sulphonylurea herbicide, chlorsulphuron, and the imidazolinone herbicide, imazapyr. The obtained crystal structure of acetohydroxyacid synthase AHAS, EC 2.2.1.6)in complex with herbicides of the sulphonylurea and imidazolinone family reveals the molecular basis for substrate/inhibitor binding.; chlorsulfuron/imidazolinone resistant 1 (CSR1); FUNCTIONS IN: acetolactate synthase activity, pyruvate decarboxylase activity; INVOLVED IN: branched chain family amino acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Acetolactate synthase, large subunit, biosynthetic (InterPro:IPR012846), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein (TAIR:AT5G17380.1); Has 30963 Blast hits to 30605 proteins in 2694 species: Archae - 488; Bacteria - 17421; Metazoa - 266; Fungi - 871; Plants - 599; Viruses - 25; Other Eukaryotes - 11293 (source: NCBI BLink). & (gnl|cdd|39368 : 843.0) no description available & (gnl|cdd|82763 : 639.0) no description available & (reliability: 2026.0) & (original description: Putative als, Description = Acetolactate synthase, PFAM = PF02776;PF00205;PF02775)' T '13.1.4.1.1' 'amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase' 'niben101scf05649_643945-654737' '(at2g31810 : 601.0) ACT domain-containing small subunit of acetolactate synthase protein; FUNCTIONS IN: acetolactate synthase activity, amino acid binding; INVOLVED IN: branched chain family amino acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetolactate synthase, small subunit (InterPro:IPR004789), Amino acid-binding ACT (InterPro:IPR002912), Acetolactate synthase, small subunit, C-terminal (InterPro:IPR019455); BEST Arabidopsis thaliana protein match is: VALINE-TOLERANT 1 (TAIR:AT5G16290.2); Has 11866 Blast hits to 6122 proteins in 1974 species: Archae - 228; Bacteria - 7362; Metazoa - 4; Fungi - 258; Plants - 114; Viruses - 0; Other Eukaryotes - 3900 (source: NCBI BLink). & (gnl|cdd|37874 : 261.0) no description available & (gnl|cdd|84024 : 196.0) no description available & (reliability: 1202.0) & (original description: Putative ilvH, Description = Acetolactate synthase, small subunit, PFAM = PF10369;PF10369;PF01842;PF13710)' T '13.1.4.1.1' 'amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase' 'niben101scf05721_21744-42184' '(at5g16290 : 602.0) VALINE-TOLERANT 1 (VAT1); FUNCTIONS IN: acetolactate synthase activity, amino acid binding; INVOLVED IN: branched chain family amino acid biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetolactate synthase, small subunit (InterPro:IPR004789), Amino acid-binding ACT (InterPro:IPR002912), Acetolactate synthase, small subunit, C-terminal (InterPro:IPR019455); BEST Arabidopsis thaliana protein match is: ACT domain-containing small subunit of acetolactate synthase protein (TAIR:AT2G31810.1); Has 12638 Blast hits to 6503 proteins in 1982 species: Archae - 228; Bacteria - 7917; Metazoa - 4; Fungi - 260; Plants - 116; Viruses - 0; Other Eukaryotes - 4113 (source: NCBI BLink). & (gnl|cdd|37874 : 264.0) no description available & (gnl|cdd|84024 : 201.0) no description available & (reliability: 1204.0) & (original description: Putative VAT1, Description = Acetolactate synthase small subunit 1, chloroplastic, PFAM = PF01842;PF13710;PF10369;PF10369)' T '13.1.4.1.2' 'amino acid metabolism.synthesis.branched chain group.common.ketol-acid reductoisomerase' 'niben044scf00007978ctg008_19386-26297' '(at3g58610 : 873.0) ketol-acid reductoisomerase; CONTAINS InterPro DOMAIN/s: Acetohydroxy acid isomeroreductase, catalytic (InterPro:IPR013116), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), Acetohydroxy acid isomeroreductase C-terminal (InterPro:IPR000506), Ketol-acid reductoisomerase (InterPro:IPR016206), Acetohydroxy acid isomeroreductase (InterPro:IPR013023), NAD(P)-binding domain (InterPro:IPR016040). & (q01292|ilv5_spiol : 859.0) Ketol-acid reductoisomerase, chloroplast precursor (EC 1.1.1.86) (Acetohydroxy-acid reductoisomerase) (Alpha-keto-beta-hydroxylacil reductoisomerase) - Spinacia oleracea (Spinach) & (gnl|cdd|30408 : 162.0) no description available & (reliability: 1746.0) & (original description: Putative kar, Description = Ketol-acid reductoisomerase, PFAM = PF07991;PF01450;PF01450)' T '13.1.4.1.2' 'amino acid metabolism.synthesis.branched chain group.common.ketol-acid reductoisomerase' 'niben044scf00011932ctg015_815-8204' '(at3g58610 : 933.0) ketol-acid reductoisomerase; CONTAINS InterPro DOMAIN/s: Acetohydroxy acid isomeroreductase, catalytic (InterPro:IPR013116), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), Acetohydroxy acid isomeroreductase C-terminal (InterPro:IPR000506), Ketol-acid reductoisomerase (InterPro:IPR016206), Acetohydroxy acid isomeroreductase (InterPro:IPR013023), NAD(P)-binding domain (InterPro:IPR016040). & (o82043|ilv5_pea : 911.0) Ketol-acid reductoisomerase, chloroplast precursor (EC 1.1.1.86) (Acetohydroxy-acid reductoisomerase) (Alpha-keto-beta-hydroxylacil reductoisomerase) - Pisum sativum (Garden pea) & (gnl|cdd|30408 : 185.0) no description available & (reliability: 1866.0) & (original description: Putative kar, Description = Ketol-acid reductoisomerase, PFAM = PF07991;PF01450;PF01450)' T '13.1.4.1.2' 'amino acid metabolism.synthesis.branched chain group.common.ketol-acid reductoisomerase' 'niben101scf01710_174242-181031' '(at3g58610 : 908.0) ketol-acid reductoisomerase; CONTAINS InterPro DOMAIN/s: Acetohydroxy acid isomeroreductase, catalytic (InterPro:IPR013116), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), Acetohydroxy acid isomeroreductase C-terminal (InterPro:IPR000506), Ketol-acid reductoisomerase (InterPro:IPR016206), Acetohydroxy acid isomeroreductase (InterPro:IPR013023), NAD(P)-binding domain (InterPro:IPR016040). & (o82043|ilv5_pea : 900.0) Ketol-acid reductoisomerase, chloroplast precursor (EC 1.1.1.86) (Acetohydroxy-acid reductoisomerase) (Alpha-keto-beta-hydroxylacil reductoisomerase) - Pisum sativum (Garden pea) & (gnl|cdd|30408 : 179.0) no description available & (reliability: 1816.0) & (original description: Putative kar, Description = Ketol-acid reductoisomerase, PFAM = PF01450;PF01450;PF07991)' T '13.1.4.1.2' 'amino acid metabolism.synthesis.branched chain group.common.ketol-acid reductoisomerase' 'niben101scf03628_1398992-1406283' '(at3g58610 : 931.0) ketol-acid reductoisomerase; CONTAINS InterPro DOMAIN/s: Acetohydroxy acid isomeroreductase, catalytic (InterPro:IPR013116), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), Acetohydroxy acid isomeroreductase C-terminal (InterPro:IPR000506), Ketol-acid reductoisomerase (InterPro:IPR016206), Acetohydroxy acid isomeroreductase (InterPro:IPR013023), NAD(P)-binding domain (InterPro:IPR016040). & (o82043|ilv5_pea : 910.0) Ketol-acid reductoisomerase, chloroplast precursor (EC 1.1.1.86) (Acetohydroxy-acid reductoisomerase) (Alpha-keto-beta-hydroxylacil reductoisomerase) - Pisum sativum (Garden pea) & (gnl|cdd|30408 : 183.0) no description available & (reliability: 1862.0) & (original description: Putative kar, Description = Ketol-acid reductoisomerase, PFAM = PF07991;PF01450;PF01450)' T '13.1.4.1.2' 'amino acid metabolism.synthesis.branched chain group.common.ketol-acid reductoisomerase' 'niben101scf04110_67208-75552' '(at3g58610 : 930.0) ketol-acid reductoisomerase; CONTAINS InterPro DOMAIN/s: Acetohydroxy acid isomeroreductase, catalytic (InterPro:IPR013116), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), Acetohydroxy acid isomeroreductase C-terminal (InterPro:IPR000506), Ketol-acid reductoisomerase (InterPro:IPR016206), Acetohydroxy acid isomeroreductase (InterPro:IPR013023), NAD(P)-binding domain (InterPro:IPR016040). & (o82043|ilv5_pea : 913.0) Ketol-acid reductoisomerase, chloroplast precursor (EC 1.1.1.86) (Acetohydroxy-acid reductoisomerase) (Alpha-keto-beta-hydroxylacil reductoisomerase) - Pisum sativum (Garden pea) & (gnl|cdd|30408 : 186.0) no description available & (reliability: 1860.0) & (original description: Putative kar, Description = Ketol-acid reductoisomerase, PFAM = PF07991;PF01450;PF01450)' T '13.1.4.1.4' 'amino acid metabolism.synthesis.branched chain group.common.branched-chain amino acid aminotransferase' 'nbv0.3scaffold183_8314-13012' '(at1g10070 : 456.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 421.0) no description available & (gnl|cdd|81992 : 319.0) no description available & (reliability: 912.0) & (original description: Putative BCAT2, Description = Branched-chain-amino-acid aminotransferase 2, chloroplastic, PFAM = PF01063)' T '13.1.4.1.4' 'amino acid metabolism.synthesis.branched chain group.common.branched-chain amino acid aminotransferase' 'niben044scf00017805ctg009_4089-14515' '(at5g65780 : 525.0) encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant; ATBCAT-5; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: little nuclei4 (TAIR:AT5G65770.3). & (gnl|cdd|36193 : 446.0) no description available & (gnl|cdd|81992 : 364.0) no description available & (reliability: 1050.0) & (original description: Putative BCAT5, Description = Branched-chain-amino-acid aminotransferase 5, chloroplastic, PFAM = PF01063)' T '13.1.4.1.4' 'amino acid metabolism.synthesis.branched chain group.common.branched-chain amino acid aminotransferase' 'niben101scf00904_28125-58391' '(at5g65780 : 555.0) encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant; ATBCAT-5; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: little nuclei4 (TAIR:AT5G65770.3). & (gnl|cdd|36193 : 448.0) no description available & (gnl|cdd|81992 : 355.0) no description available & (reliability: 1110.0) & (original description: Putative BCAT5, Description = Branched-chain-amino-acid aminotransferase 5, chloroplastic, PFAM = PF01063)' T '13.1.4.1.4' 'amino acid metabolism.synthesis.branched chain group.common.branched-chain amino acid aminotransferase' 'niben101scf01267_7869-12654' '(at1g10070 : 520.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 410.0) no description available & (gnl|cdd|81992 : 327.0) no description available & (reliability: 1040.0) & (original description: Putative BCAT2, Description = Branched-chain-amino-acid aminotransferase 2, chloroplastic, PFAM = PF01063)' T '13.1.4.1.4' 'amino acid metabolism.synthesis.branched chain group.common.branched-chain amino acid aminotransferase' 'niben101scf02348_905784-914291' '(at1g10070 : 471.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 386.0) no description available & (gnl|cdd|81992 : 313.0) no description available & (reliability: 942.0) & (original description: Putative BCAT2, Description = Branched-chain-amino-acid aminotransferase 2, chloroplastic, PFAM = PF01063)' T '13.1.4.1.4' 'amino acid metabolism.synthesis.branched chain group.common.branched-chain amino acid aminotransferase' 'niben101scf04700_79196-85409' '(at1g10070 : 453.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 414.0) no description available & (gnl|cdd|81992 : 323.0) no description available & (reliability: 906.0) & (original description: Putative BCAT2, Description = Branched-chain-amino-acid aminotransferase 2, chloroplastic, PFAM = PF01063)' T '13.1.4.1.4' 'amino acid metabolism.synthesis.branched chain group.common.branched-chain amino acid aminotransferase' 'niben101scf04843_12864-20690' '(at1g10070 : 464.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 389.0) no description available & (gnl|cdd|81992 : 304.0) no description available & (reliability: 928.0) & (original description: Putative BCAT6, Description = Branched-chain-amino-acid aminotransferase 6, PFAM = PF01063)' T '13.1.4.1.4' 'amino acid metabolism.synthesis.branched chain group.common.branched-chain amino acid aminotransferase' 'niben101scf04884_112078-119759' '(at5g65770 : 474.0) LITTLE NUCLEI4 (LINC4); EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.2). & (gnl|cdd|35383 : 92.2) no description available & (reliability: 932.0) & (original description: Putative CRWN4, Description = Protein CROWDED NUCLEI 4, PFAM = )' T '13.1.4.1.4' 'amino acid metabolism.synthesis.branched chain group.common.branched-chain amino acid aminotransferase' 'niben101scf04884_119708-130150' '(at5g65780 : 531.0) encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant; ATBCAT-5; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: little nuclei4 (TAIR:AT5G65770.3). & (gnl|cdd|36193 : 450.0) no description available & (gnl|cdd|81992 : 367.0) no description available & (reliability: 1062.0) & (original description: Putative ilvE, Description = Branched-chain-amino-acid aminotransferase, PFAM = PF01063)' T '13.1.4.1.4' 'amino acid metabolism.synthesis.branched chain group.common.branched-chain amino acid aminotransferase' 'niben101scf08939_29970-43319' '(at1g10070 : 458.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 425.0) no description available & (gnl|cdd|81992 : 321.0) no description available & (reliability: 916.0) & (original description: Putative BCAT2, Description = Branched-chain-amino-acid aminotransferase 2, chloroplastic, PFAM = PF01063)' T '13.1.4.3' 'amino acid metabolism.synthesis.branched chain group.valine specific' '' '' '13.1.4.3.1001' 'amino acid metabolism.synthesis.branched chain group.valine specific' 'valine' 'amino acid synthesis.valine; amino acid degradation.valine' M '13.1.4.4' 'amino acid metabolism.synthesis.branched chain group.leucine specific' '' '' '13.1.4.4.1' 'amino acid metabolism.synthesis.branched chain group.leucine specific.2-isopropylmalate synthase' 'niben101scf01077_404579-412431' '(at1g74040 : 565.0) Encodes an active Arabidopsis isopropylmalate synthase IPMS2. Involved in leucine biosynthesis. Do not participate in the chain elongation of glucosinolates. Expressed constitutively throughout the plant. Loss of IPMS2 can be compensated by a second isopropylmalate synthase gene IPMS1 (At1g18500).; 2-isopropylmalate synthase 1 (IMS1); FUNCTIONS IN: 2-isopropylmalate synthase activity; INVOLVED IN: leucine biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Alpha-isopropylmalate/homocitrate synthase, conserved site (InterPro:IPR002034), 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain (InterPro:IPR013709), Pyruvate carboxyltransferase (InterPro:IPR000891), Bacterial 2-isopropylmalate synthase (InterPro:IPR005671); BEST Arabidopsis thaliana protein match is: methylthioalkylmalate synthase-like 4 (TAIR:AT1G18500.1); Has 16891 Blast hits to 16883 proteins in 2449 species: Archae - 499; Bacteria - 8886; Metazoa - 193; Fungi - 474; Plants - 279; Viruses - 0; Other Eukaryotes - 6560 (source: NCBI BLink). & (gnl|cdd|80776 : 546.0) no description available & (q39891|leu1_soybn : 499.0) Probable 2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) (Late nodulin 56) (N-56) - Glycine max (Soybean) & (gnl|cdd|37578 : 479.0) no description available & (reliability: 1130.0) & (original description: Putative aksA, Description = Trans-homoaconitate synthase, PFAM = PF00682)' T '13.1.4.4.1' 'amino acid metabolism.synthesis.branched chain group.leucine specific.2-isopropylmalate synthase' 'niben101scf01681_222196-244053' '(at1g74040 : 874.0) Encodes an active Arabidopsis isopropylmalate synthase IPMS2. Involved in leucine biosynthesis. Do not participate in the chain elongation of glucosinolates. Expressed constitutively throughout the plant. Loss of IPMS2 can be compensated by a second isopropylmalate synthase gene IPMS1 (At1g18500).; 2-isopropylmalate synthase 1 (IMS1); FUNCTIONS IN: 2-isopropylmalate synthase activity; INVOLVED IN: leucine biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Alpha-isopropylmalate/homocitrate synthase, conserved site (InterPro:IPR002034), 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain (InterPro:IPR013709), Pyruvate carboxyltransferase (InterPro:IPR000891), Bacterial 2-isopropylmalate synthase (InterPro:IPR005671); BEST Arabidopsis thaliana protein match is: methylthioalkylmalate synthase-like 4 (TAIR:AT1G18500.1); Has 16891 Blast hits to 16883 proteins in 2449 species: Archae - 499; Bacteria - 8886; Metazoa - 193; Fungi - 474; Plants - 279; Viruses - 0; Other Eukaryotes - 6560 (source: NCBI BLink). & (q39891|leu1_soybn : 701.0) Probable 2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) (Late nodulin 56) (N-56) - Glycine max (Soybean) & (gnl|cdd|80776 : 698.0) no description available & (gnl|cdd|37578 : 650.0) no description available & (reliability: 1748.0) & (original description: Putative IPMSA, Description = 2-isopropylmalate synthase A, PFAM = PF00682;PF08502)' T '13.1.4.4.1' 'amino acid metabolism.synthesis.branched chain group.leucine specific.2-isopropylmalate synthase' 'niben101scf01681_420689-429322' '(at1g74040 : 548.0) Encodes an active Arabidopsis isopropylmalate synthase IPMS2. Involved in leucine biosynthesis. Do not participate in the chain elongation of glucosinolates. Expressed constitutively throughout the plant. Loss of IPMS2 can be compensated by a second isopropylmalate synthase gene IPMS1 (At1g18500).; 2-isopropylmalate synthase 1 (IMS1); FUNCTIONS IN: 2-isopropylmalate synthase activity; INVOLVED IN: leucine biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Alpha-isopropylmalate/homocitrate synthase, conserved site (InterPro:IPR002034), 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain (InterPro:IPR013709), Pyruvate carboxyltransferase (InterPro:IPR000891), Bacterial 2-isopropylmalate synthase (InterPro:IPR005671); BEST Arabidopsis thaliana protein match is: methylthioalkylmalate synthase-like 4 (TAIR:AT1G18500.1); Has 16891 Blast hits to 16883 proteins in 2449 species: Archae - 499; Bacteria - 8886; Metazoa - 193; Fungi - 474; Plants - 279; Viruses - 0; Other Eukaryotes - 6560 (source: NCBI BLink). & (gnl|cdd|80776 : 543.0) no description available & (q39891|leu1_soybn : 486.0) Probable 2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) (Late nodulin 56) (N-56) - Glycine max (Soybean) & (gnl|cdd|37578 : 462.0) no description available & (reliability: 1096.0) & (original description: Putative aksA, Description = 2-isopropylmalate synthase, PFAM = PF00682)' T '13.1.4.4.1' 'amino acid metabolism.synthesis.branched chain group.leucine specific.2-isopropylmalate synthase' 'niben101scf08892_30496-44302' '(at1g74040 : 889.0) Encodes an active Arabidopsis isopropylmalate synthase IPMS2. Involved in leucine biosynthesis. Do not participate in the chain elongation of glucosinolates. Expressed constitutively throughout the plant. Loss of IPMS2 can be compensated by a second isopropylmalate synthase gene IPMS1 (At1g18500).; 2-isopropylmalate synthase 1 (IMS1); FUNCTIONS IN: 2-isopropylmalate synthase activity; INVOLVED IN: leucine biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Alpha-isopropylmalate/homocitrate synthase, conserved site (InterPro:IPR002034), 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain (InterPro:IPR013709), Pyruvate carboxyltransferase (InterPro:IPR000891), Bacterial 2-isopropylmalate synthase (InterPro:IPR005671); BEST Arabidopsis thaliana protein match is: methylthioalkylmalate synthase-like 4 (TAIR:AT1G18500.1); Has 16891 Blast hits to 16883 proteins in 2449 species: Archae - 499; Bacteria - 8886; Metazoa - 193; Fungi - 474; Plants - 279; Viruses - 0; Other Eukaryotes - 6560 (source: NCBI BLink). & (q39891|leu1_soybn : 721.0) Probable 2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) (Late nodulin 56) (N-56) - Glycine max (Soybean) & (gnl|cdd|80776 : 701.0) no description available & (gnl|cdd|37578 : 657.0) no description available & (reliability: 1778.0) & (original description: Putative IPMSB, Description = 2-isopropylmalate synthase B, PFAM = PF08502;PF00682)' T '13.1.4.4.2' 'amino acid metabolism.synthesis.branched chain group.leucine specific.isopropylmalate isomerase' '' '' '13.1.4.4.3' 'amino acid metabolism.synthesis.branched chain group.leucine specific.3-isopropylmalate dehydrogenase' 'niben044scf00024661ctg003_3997-12266' '(at1g80560 : 599.0) The AtIMD2 is one out of 3 genes encoding the enzyme 3-isopropylmalate dehydrogenase involved in leucine biosynthesis in Arabidopsis. Its subcellular location has been targeted to plastids.; isopropylmalate dehydrogenase 2 (IMD2); FUNCTIONS IN: 3-isopropylmalate dehydrogenase activity; INVOLVED IN: leucine biosynthetic process, metabolic process; LOCATED IN: chloroplast, chloroplast stroma, plastid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Isopropylmalate dehydrogenase (InterPro:IPR004429), Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isopropylmalate dehydrogenase 3 (TAIR:AT1G31180.1); Has 15265 Blast hits to 15265 proteins in 2613 species: Archae - 395; Bacteria - 8292; Metazoa - 578; Fungi - 832; Plants - 243; Viruses - 0; Other Eukaryotes - 4925 (source: NCBI BLink). & (p29102|leu3_brana : 588.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Brassica napus (Rape) & (gnl|cdd|36005 : 538.0) no description available & (gnl|cdd|80743 : 535.0) no description available & (reliability: 1198.0) & (original description: Putative IMDH2, Description = 3-isopropylmalate dehydrogenase 2, chloroplastic, PFAM = PF00180)' T '13.1.4.4.3' 'amino acid metabolism.synthesis.branched chain group.leucine specific.3-isopropylmalate dehydrogenase' 'niben101scf01899_760268-770046' '(at1g80560 : 627.0) The AtIMD2 is one out of 3 genes encoding the enzyme 3-isopropylmalate dehydrogenase involved in leucine biosynthesis in Arabidopsis. Its subcellular location has been targeted to plastids.; isopropylmalate dehydrogenase 2 (IMD2); FUNCTIONS IN: 3-isopropylmalate dehydrogenase activity; INVOLVED IN: leucine biosynthetic process, metabolic process; LOCATED IN: chloroplast, chloroplast stroma, plastid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Isopropylmalate dehydrogenase (InterPro:IPR004429), Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isopropylmalate dehydrogenase 3 (TAIR:AT1G31180.1); Has 15265 Blast hits to 15265 proteins in 2613 species: Archae - 395; Bacteria - 8292; Metazoa - 578; Fungi - 832; Plants - 243; Viruses - 0; Other Eukaryotes - 4925 (source: NCBI BLink). & (p29102|leu3_brana : 617.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Brassica napus (Rape) & (gnl|cdd|80743 : 541.0) no description available & (gnl|cdd|36005 : 537.0) no description available & (reliability: 1254.0) & (original description: Putative IMDH2, Description = 3-isopropylmalate dehydrogenase 2, chloroplastic, PFAM = PF00180)' T '13.1.4.4.4' 'amino acid metabolism.synthesis.branched chain group.leucine specific.aminotransferase' '' '' '13.1.4.4.1001' 'amino acid metabolism.synthesis.branched chain group.leucine specific' 'leucine' 'amino acid synthesis.leucine; amino acid degradation.leucine' M '13.1.4.5' 'amino acid metabolism.synthesis.branched chain group.isoleucine specific' 'niben101scf03374_904385-910084' '(at4g11640 : 433.0) Serine racemase, which is a bifunctional PLP-dependent enzyme catalyzing racemization of serine and dehydration of serine to pyruvate in the same way as mammalian serine racemases. similar to mammalian serine racemases.; serine racemase (SR); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: L-O-methylthreonine resistant 1 (TAIR:AT3G10050.1); Has 19715 Blast hits to 19705 proteins in 2624 species: Archae - 539; Bacteria - 13612; Metazoa - 549; Fungi - 719; Plants - 186; Viruses - 2; Other Eukaryotes - 4108 (source: NCBI BLink). & (gnl|cdd|36465 : 416.0) no description available & (gnl|cdd|31364 : 310.0) no description available & (q39469|thd1_cicar : 126.0) Threonine dehydratase biosynthetic, chloroplast precursor (EC 4.3.1.19) (Threonine deaminase) (TD) - Cicer arietinum (Chickpea) (Garbanzo) & (reliability: 866.0) & (original description: Putative ilvA, Description = Serine racemase, PFAM = PF00291)' T '13.1.4.5.1' 'amino acid metabolism.synthesis.branched chain group.isoleucine specific.threonine ammonia-lyase' 'nbv0.5scaffold2044_323973-354333' '(gnl|cdd|82867 : 156.0) no description available & (at3g10050 : 139.0) first enzyme in the biosynthetic pathway of isoleucine; L-O-methylthreonine resistant 1 (OMR1); FUNCTIONS IN: L-threonine ammonia-lyase activity; INVOLVED IN: isoleucine biosynthetic process, threonine metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Threonine dehydratase I (InterPro:IPR005787), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Threonine dehydratase, C-terminal (InterPro:IPR001721), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: serine racemase (TAIR:AT4G11640.1); Has 26917 Blast hits to 26860 proteins in 2759 species: Archae - 692; Bacteria - 18712; Metazoa - 552; Fungi - 889; Plants - 577; Viruses - 2; Other Eukaryotes - 5493 (source: NCBI BLink). & (gnl|cdd|36464 : 115.0) no description available & (q39469|thd1_cicar : 110.0) Threonine dehydratase biosynthetic, chloroplast precursor (EC 4.3.1.19) (Threonine deaminase) (TD) - Cicer arietinum (Chickpea) (Garbanzo) & (reliability: 278.0) & (original description: Putative ilvA, Description = L-threonine dehydratase, PFAM = PF00291)' T '13.1.4.5.1' 'amino acid metabolism.synthesis.branched chain group.isoleucine specific.threonine ammonia-lyase' 'niben101scf00111_23088-64518' '(gnl|cdd|82867 : 718.0) no description available & (at3g10050 : 684.0) first enzyme in the biosynthetic pathway of isoleucine; L-O-methylthreonine resistant 1 (OMR1); FUNCTIONS IN: L-threonine ammonia-lyase activity; INVOLVED IN: isoleucine biosynthetic process, threonine metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Threonine dehydratase I (InterPro:IPR005787), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Threonine dehydratase, C-terminal (InterPro:IPR001721), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: serine racemase (TAIR:AT4G11640.1); Has 26917 Blast hits to 26860 proteins in 2759 species: Archae - 692; Bacteria - 18712; Metazoa - 552; Fungi - 889; Plants - 577; Viruses - 2; Other Eukaryotes - 5493 (source: NCBI BLink). & (gnl|cdd|36464 : 477.0) no description available & (q39469|thd1_cicar : 403.0) Threonine dehydratase biosynthetic, chloroplast precursor (EC 4.3.1.19) (Threonine deaminase) (TD) - Cicer arietinum (Chickpea) (Garbanzo) & (reliability: 1368.0) & (original description: Putative OMR1, Description = Threonine dehydratase biosynthetic, chloroplastic, PFAM = PF00291;PF00585;PF00585)' T '13.1.4.5.1' 'amino acid metabolism.synthesis.branched chain group.isoleucine specific.threonine ammonia-lyase' 'niben101scf00682_433265-440607' '(gnl|cdd|82867 : 693.0) no description available & (at3g10050 : 611.0) first enzyme in the biosynthetic pathway of isoleucine; L-O-methylthreonine resistant 1 (OMR1); FUNCTIONS IN: L-threonine ammonia-lyase activity; INVOLVED IN: isoleucine biosynthetic process, threonine metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Threonine dehydratase I (InterPro:IPR005787), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Threonine dehydratase, C-terminal (InterPro:IPR001721), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: serine racemase (TAIR:AT4G11640.1); Has 26917 Blast hits to 26860 proteins in 2759 species: Archae - 692; Bacteria - 18712; Metazoa - 552; Fungi - 889; Plants - 577; Viruses - 2; Other Eukaryotes - 5493 (source: NCBI BLink). & (q39469|thd1_cicar : 498.0) Threonine dehydratase biosynthetic, chloroplast precursor (EC 4.3.1.19) (Threonine deaminase) (TD) - Cicer arietinum (Chickpea) (Garbanzo) & (gnl|cdd|36464 : 443.0) no description available & (reliability: 1222.0) & (original description: Putative TD, Description = Threonine dehydratase biosynthetic, chloroplastic, PFAM = PF00291;PF00585;PF00585)' T '13.1.4.5.1' 'amino acid metabolism.synthesis.branched chain group.isoleucine specific.threonine ammonia-lyase' 'niben101scf02502_1439058-1458325' '(gnl|cdd|82867 : 736.0) no description available & (at3g10050 : 728.0) first enzyme in the biosynthetic pathway of isoleucine; L-O-methylthreonine resistant 1 (OMR1); FUNCTIONS IN: L-threonine ammonia-lyase activity; INVOLVED IN: isoleucine biosynthetic process, threonine metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Threonine dehydratase I (InterPro:IPR005787), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Threonine dehydratase, C-terminal (InterPro:IPR001721), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: serine racemase (TAIR:AT4G11640.1); Has 26917 Blast hits to 26860 proteins in 2759 species: Archae - 692; Bacteria - 18712; Metazoa - 552; Fungi - 889; Plants - 577; Viruses - 2; Other Eukaryotes - 5493 (source: NCBI BLink). & (gnl|cdd|36464 : 484.0) no description available & (q39469|thd1_cicar : 416.0) Threonine dehydratase biosynthetic, chloroplast precursor (EC 4.3.1.19) (Threonine deaminase) (TD) - Cicer arietinum (Chickpea) (Garbanzo) & (reliability: 1456.0) & (original description: Putative OMR1, Description = Threonine dehydratase biosynthetic, chloroplastic, PFAM = PF00291;PF00585;PF00585)' T '13.1.4.5.1' 'amino acid metabolism.synthesis.branched chain group.isoleucine specific.threonine ammonia-lyase' 'niben101scf03481_30-4986' '(gnl|cdd|82867 : 458.0) no description available & (q39469|thd1_cicar : 386.0) Threonine dehydratase biosynthetic, chloroplast precursor (EC 4.3.1.19) (Threonine deaminase) (TD) - Cicer arietinum (Chickpea) (Garbanzo) & (at3g10050 : 379.0) first enzyme in the biosynthetic pathway of isoleucine; L-O-methylthreonine resistant 1 (OMR1); FUNCTIONS IN: L-threonine ammonia-lyase activity; INVOLVED IN: isoleucine biosynthetic process, threonine metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Threonine dehydratase I (InterPro:IPR005787), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Threonine dehydratase, C-terminal (InterPro:IPR001721), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: serine racemase (TAIR:AT4G11640.1); Has 26917 Blast hits to 26860 proteins in 2759 species: Archae - 692; Bacteria - 18712; Metazoa - 552; Fungi - 889; Plants - 577; Viruses - 2; Other Eukaryotes - 5493 (source: NCBI BLink). & (gnl|cdd|36464 : 342.0) no description available & (reliability: 758.0) & (original description: Putative ilvA, Description = L-threonine dehydratase, PFAM = PF00585;PF00291;PF00291)' T '13.1.4.5.1001' 'amino acid metabolism.synthesis.branched chain group.isoleucine specific' 'isoleucine' 'amino acid synthesis.isoleucine; amino acid degradation.isoleucine' M '13.1.5' 'amino acid metabolism.synthesis.serine-glycine-cysteine group' '' '' '13.1.5.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine' '' '' '13.1.5.1.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase' 'nbv0.5scaffold3397_287790-294304' '(at4g34200 : 795.0) embryo sac development arrest 9 (EDA9); FUNCTIONS IN: ATP binding; INVOLVED IN: megagametogenesis; LOCATED IN: mitochondrion, chloroplast, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: D-3-phosphoglycerate dehydrogenase (InterPro:IPR006236), D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), D-3-phosphogylcerate Dehydrogenase (InterPro:IPR015508), Amino acid-binding ACT (InterPro:IPR002912), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT3G19480.1); Has 30608 Blast hits to 30602 proteins in 2772 species: Archae - 489; Bacteria - 18520; Metazoa - 741; Fungi - 1175; Plants - 586; Viruses - 5; Other Eukaryotes - 9092 (source: NCBI BLink). & (gnl|cdd|35291 : 541.0) no description available & (gnl|cdd|84741 : 368.0) no description available & (p13443|dhgy_cucsa : 96.7) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 1590.0) & (original description: Putative PGDH1, Description = D-3-phosphoglycerate dehydrogenase 1, chloroplastic, PFAM = PF00389;PF02826;PF01842)' T '13.1.5.1.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase' 'niben044scf00034661ctg001_7604-13635' '(at4g34200 : 813.0) embryo sac development arrest 9 (EDA9); FUNCTIONS IN: ATP binding; INVOLVED IN: megagametogenesis; LOCATED IN: mitochondrion, chloroplast, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: D-3-phosphoglycerate dehydrogenase (InterPro:IPR006236), D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), D-3-phosphogylcerate Dehydrogenase (InterPro:IPR015508), Amino acid-binding ACT (InterPro:IPR002912), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT3G19480.1); Has 30608 Blast hits to 30602 proteins in 2772 species: Archae - 489; Bacteria - 18520; Metazoa - 741; Fungi - 1175; Plants - 586; Viruses - 5; Other Eukaryotes - 9092 (source: NCBI BLink). & (gnl|cdd|35291 : 545.0) no description available & (gnl|cdd|84741 : 373.0) no description available & (q07511|fdh_soltu : 102.0) Formate dehydrogenase, mitochondrial precursor (EC 1.2.1.2) (NAD-dependent formate dehydrogenase) (FDH) - Solanum tuberosum (Potato) & (reliability: 1626.0) & (original description: Putative PGDH1, Description = D-3-phosphoglycerate dehydrogenase 1, chloroplastic, PFAM = PF02826;PF01842;PF00389)' T '13.1.5.1.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase' 'niben101scf00234_65288-70459' '(at1g17745 : 864.0) encodes a 3-Phosphoglycerate dehydrogenase; D-3-phosphoglycerate dehydrogenase; CONTAINS InterPro DOMAIN/s: D-3-phosphoglycerate dehydrogenase (InterPro:IPR006236), D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), D-3-phosphogylcerate Dehydrogenase (InterPro:IPR015508), NAD(P)-binding domain (InterPro:IPR016040), Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT4G34200.1). & (gnl|cdd|35291 : 546.0) no description available & (gnl|cdd|84741 : 371.0) no description available & (p13443|dhgy_cucsa : 107.0) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 1728.0) & (original description: Putative PGDH2, Description = D-3-phosphoglycerate dehydrogenase 2, chloroplastic, PFAM = PF02826;PF00389;PF01842)' T '13.1.5.1.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase' 'niben101scf06896_1303-15173' '(at4g34200 : 813.0) embryo sac development arrest 9 (EDA9); FUNCTIONS IN: ATP binding; INVOLVED IN: megagametogenesis; LOCATED IN: mitochondrion, chloroplast, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: D-3-phosphoglycerate dehydrogenase (InterPro:IPR006236), D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), D-3-phosphogylcerate Dehydrogenase (InterPro:IPR015508), Amino acid-binding ACT (InterPro:IPR002912), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT3G19480.1); Has 30608 Blast hits to 30602 proteins in 2772 species: Archae - 489; Bacteria - 18520; Metazoa - 741; Fungi - 1175; Plants - 586; Viruses - 5; Other Eukaryotes - 9092 (source: NCBI BLink). & (gnl|cdd|35291 : 547.0) no description available & (gnl|cdd|84741 : 373.0) no description available & (q07511|fdh_soltu : 102.0) Formate dehydrogenase, mitochondrial precursor (EC 1.2.1.2) (NAD-dependent formate dehydrogenase) (FDH) - Solanum tuberosum (Potato) & (reliability: 1626.0) & (original description: Putative PGDH1, Description = D-3-phosphoglycerate dehydrogenase 1, chloroplastic, PFAM = PF02826;PF00389;PF01842)' T '13.1.5.1.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase' 'niben101scf07741_84030-88905' '(at1g17745 : 855.0) encodes a 3-Phosphoglycerate dehydrogenase; D-3-phosphoglycerate dehydrogenase; CONTAINS InterPro DOMAIN/s: D-3-phosphoglycerate dehydrogenase (InterPro:IPR006236), D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), D-3-phosphogylcerate Dehydrogenase (InterPro:IPR015508), NAD(P)-binding domain (InterPro:IPR016040), Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT4G34200.1). & (gnl|cdd|35291 : 546.0) no description available & (gnl|cdd|84741 : 371.0) no description available & (p13443|dhgy_cucsa : 109.0) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 1710.0) & (original description: Putative PGDH2, Description = D-3-phosphoglycerate dehydrogenase 2, chloroplastic, PFAM = PF00389;PF02826;PF01842)' T '13.1.5.1.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase' 'niben101scf09379_170009-175012' '(at4g34200 : 791.0) embryo sac development arrest 9 (EDA9); FUNCTIONS IN: ATP binding; INVOLVED IN: megagametogenesis; LOCATED IN: mitochondrion, chloroplast, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: D-3-phosphoglycerate dehydrogenase (InterPro:IPR006236), D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), D-3-phosphogylcerate Dehydrogenase (InterPro:IPR015508), Amino acid-binding ACT (InterPro:IPR002912), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT3G19480.1); Has 30608 Blast hits to 30602 proteins in 2772 species: Archae - 489; Bacteria - 18520; Metazoa - 741; Fungi - 1175; Plants - 586; Viruses - 5; Other Eukaryotes - 9092 (source: NCBI BLink). & (gnl|cdd|35291 : 539.0) no description available & (gnl|cdd|84741 : 366.0) no description available & (p13443|dhgy_cucsa : 99.0) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 1582.0) & (original description: Putative PGDH1, Description = D-3-phosphoglycerate dehydrogenase 1, chloroplastic, PFAM = PF00389;PF01842;PF02826)' T '13.1.5.1.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoserine aminotransferase' 'nbv0.3scaffold54418_1761-5071' '(at4g35630 : 622.0) Encodes a phosphoserine aminotransferase which is involved in serine biosynthesis in the chloroplast which operates via the phosphorylated pathway.; phosphoserine aminotransferase (PSAT); FUNCTIONS IN: O-phospho-L-serine:2-oxoglutarate aminotransferase activity; INVOLVED IN: L-serine biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase class-V pyridoxal-phosphate binding site (InterPro:IPR020578), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Phosphoserine aminotransferase, subgroup (InterPro:IPR003248), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Phosphoserine aminotransferase (InterPro:IPR022278); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT2G17630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81544 : 596.0) no description available & (gnl|cdd|38001 : 580.0) no description available & (p52877|serc_spiol : 559.0) Phosphoserine aminotransferase, chloroplast precursor (EC 2.6.1.52) (PSAT) - Spinacia oleracea (Spinach) & (reliability: 1244.0) & (original description: Putative PSAT1, Description = Phosphoserine aminotransferase 1, chloroplastic, PFAM = PF00266)' T '13.1.5.1.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoserine aminotransferase' 'nbv0.5scaffold372_261730-265040' '(at4g35630 : 619.0) Encodes a phosphoserine aminotransferase which is involved in serine biosynthesis in the chloroplast which operates via the phosphorylated pathway.; phosphoserine aminotransferase (PSAT); FUNCTIONS IN: O-phospho-L-serine:2-oxoglutarate aminotransferase activity; INVOLVED IN: L-serine biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase class-V pyridoxal-phosphate binding site (InterPro:IPR020578), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Phosphoserine aminotransferase, subgroup (InterPro:IPR003248), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Phosphoserine aminotransferase (InterPro:IPR022278); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT2G17630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81544 : 594.0) no description available & (gnl|cdd|38001 : 579.0) no description available & (p52877|serc_spiol : 563.0) Phosphoserine aminotransferase, chloroplast precursor (EC 2.6.1.52) (PSAT) - Spinacia oleracea (Spinach) & (reliability: 1238.0) & (original description: Putative psat, Description = Phosphoserine aminotransferase, PFAM = PF00266)' T '13.1.5.1.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoserine aminotransferase' 'niben044scf00020258ctg009_1128-4526' '(at4g35630 : 620.0) Encodes a phosphoserine aminotransferase which is involved in serine biosynthesis in the chloroplast which operates via the phosphorylated pathway.; phosphoserine aminotransferase (PSAT); FUNCTIONS IN: O-phospho-L-serine:2-oxoglutarate aminotransferase activity; INVOLVED IN: L-serine biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase class-V pyridoxal-phosphate binding site (InterPro:IPR020578), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Phosphoserine aminotransferase, subgroup (InterPro:IPR003248), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Phosphoserine aminotransferase (InterPro:IPR022278); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT2G17630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81544 : 594.0) no description available & (gnl|cdd|38001 : 579.0) no description available & (p52877|serc_spiol : 560.0) Phosphoserine aminotransferase, chloroplast precursor (EC 2.6.1.52) (PSAT) - Spinacia oleracea (Spinach) & (reliability: 1240.0) & (original description: Putative PSAT1, Description = Phosphoserine aminotransferase 1, chloroplastic, PFAM = PF00266)' T '13.1.5.1.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoserine aminotransferase' 'niben101scf06263_117108-120612' '(at2g17630 : 584.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, transaminase activity, catalytic activity, O-phospho-L-serine:2-oxoglutarate aminotransferase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Aminotransferase class-V pyridoxal-phosphate binding site (InterPro:IPR020578), Phosphoserine aminotransferase, subgroup (InterPro:IPR003248), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Phosphoserine aminotransferase (InterPro:IPR022278); BEST Arabidopsis thaliana protein match is: phosphoserine aminotransferase (TAIR:AT4G35630.1); Has 5143 Blast hits to 5141 proteins in 1794 species: Archae - 74; Bacteria - 3425; Metazoa - 166; Fungi - 141; Plants - 61; Viruses - 0; Other Eukaryotes - 1276 (source: NCBI BLink). & (gnl|cdd|81544 : 558.0) no description available & (gnl|cdd|38001 : 542.0) no description available & (p52877|serc_spiol : 526.0) Phosphoserine aminotransferase, chloroplast precursor (EC 2.6.1.52) (PSAT) - Spinacia oleracea (Spinach) & (reliability: 1168.0) & (original description: Putative psat, Description = Phosphohydroxythreonine aminotransferase, PFAM = PF00266)' T '13.1.5.1.3' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoserine phosphatase' 'nbv0.5scaffold7449_15239-23482' '(at1g18640 : 280.0) Encodes a 3-phosphoserine phosphatase acting in the last step of serine biosynthesis within the chloroplast.; 3-phosphoserine phosphatase (PSP); FUNCTIONS IN: phosphoserine phosphatase activity; INVOLVED IN: L-serine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Phosphoserine phosphatase SerB (InterPro:IPR004469), HAD-superfamily hydrolase, subfamily IB, PSPase-like (InterPro:IPR006383); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36828 : 254.0) no description available & (gnl|cdd|30906 : 103.0) no description available & (reliability: 560.0) & (original description: Putative aay, Description = Phosphoserine phosphatase, PFAM = PF00702)' T '13.1.5.1.3' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoserine phosphatase' 'niben101scf09973_15245-24070' '(at1g18640 : 346.0) Encodes a 3-phosphoserine phosphatase acting in the last step of serine biosynthesis within the chloroplast.; 3-phosphoserine phosphatase (PSP); FUNCTIONS IN: phosphoserine phosphatase activity; INVOLVED IN: L-serine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Phosphoserine phosphatase SerB (InterPro:IPR004469), HAD-superfamily hydrolase, subfamily IB, PSPase-like (InterPro:IPR006383); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36828 : 293.0) no description available & (gnl|cdd|30906 : 105.0) no description available & (reliability: 692.0) & (original description: Putative PSPH, Description = Phosphoserine phosphatase, PFAM = PF00702)' T '13.1.5.1.3' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoserine phosphatase' 'niben101scf10384_13505-23111' '(at1g18640 : 349.0) Encodes a 3-phosphoserine phosphatase acting in the last step of serine biosynthesis within the chloroplast.; 3-phosphoserine phosphatase (PSP); FUNCTIONS IN: phosphoserine phosphatase activity; INVOLVED IN: L-serine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Phosphoserine phosphatase SerB (InterPro:IPR004469), HAD-superfamily hydrolase, subfamily IB, PSPase-like (InterPro:IPR006383); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36828 : 296.0) no description available & (gnl|cdd|30906 : 104.0) no description available & (reliability: 698.0) & (original description: Putative PSP, Description = Phosphoserine phosphatase, chloroplastic, PFAM = PF00702)' T '13.1.5.1.1001' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine' 'serine' 'PS.photorepiration; lipid metabolism; amino acid degradation.homoserine; amino acid synthesis.serine; amino acid degradation.serine; amino acid degradation.methionine; S-assimilation' M '13.1.5.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine' '' '' '13.1.5.2.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine.glycine hydroxymethyltransferase' '' '' '13.1.5.2.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine.glycine transaminase' 'niben101scf01917_1321680-1328123' '(at1g70580 : 863.0) Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro.; alanine-2-oxoglutarate aminotransferase 2 (AOAT2); FUNCTIONS IN: glycine:2-oxoglutarate aminotransferase activity, L-alanine:2-oxoglutarate aminotransferase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: glutamate:glyoxylate aminotransferase (TAIR:AT1G23310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35479 : 695.0) no description available & (p52894|ala2_horvu : 488.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|82896 : 191.0) no description available & (reliability: 1726.0) & (original description: Putative GGAT2, Description = Glutamate--glyoxylate aminotransferase 2, PFAM = PF00155)' T '13.1.5.2.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine.glycine transaminase' 'niben101scf02937_428544-438037' '(at1g70580 : 887.0) Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro.; alanine-2-oxoglutarate aminotransferase 2 (AOAT2); FUNCTIONS IN: glycine:2-oxoglutarate aminotransferase activity, L-alanine:2-oxoglutarate aminotransferase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: glutamate:glyoxylate aminotransferase (TAIR:AT1G23310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35479 : 712.0) no description available & (p52894|ala2_horvu : 507.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|30785 : 188.0) no description available & (reliability: 1774.0) & (original description: Putative GGAT2, Description = Glutamate--glyoxylate aminotransferase 2, PFAM = PF00155)' T '13.1.5.2.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine.glycine transaminase' 'niben101scf10162_21719-29222' '(at1g70580 : 882.0) Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro.; alanine-2-oxoglutarate aminotransferase 2 (AOAT2); FUNCTIONS IN: glycine:2-oxoglutarate aminotransferase activity, L-alanine:2-oxoglutarate aminotransferase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: glutamate:glyoxylate aminotransferase (TAIR:AT1G23310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35479 : 711.0) no description available & (p52894|ala2_horvu : 510.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (gnl|cdd|30785 : 189.0) no description available & (reliability: 1764.0) & (original description: Putative gpt, Description = Probable alanine aminotransferase, mitochondrial, PFAM = PF00155)' T '13.1.5.2.3' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine.serine glyoxylate aminotransferase' 'niben101scf00797_1849693-1855908' '(at2g13360 : 728.0) Encodes a peroxisomal photorespiratory enzyme that catalyzes transamination reactions with multiple substrates. It is involved in photorespiration.; alanine:glyoxylate aminotransferase (AGT); FUNCTIONS IN: serine-pyruvate transaminase activity, serine-glyoxylate transaminase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: apoplast, peroxisome, plasma membrane, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Aminotransferase class-V pyridoxal-phosphate binding site (InterPro:IPR020578), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); Has 6407 Blast hits to 6405 proteins in 1610 species: Archae - 309; Bacteria - 3905; Metazoa - 186; Fungi - 125; Plants - 148; Viruses - 0; Other Eukaryotes - 1734 (source: NCBI BLink). & (gnl|cdd|38073 : 463.0) no description available & (gnl|cdd|30424 : 379.0) no description available & (p84187|sgat_maize : 102.0) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT) (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) (Fragments) - Zea mays (Maize) & (reliability: 1456.0) & (original description: Putative AGT1, Description = Serine--glyoxylate aminotransferase, PFAM = PF00266)' T '13.1.5.2.3' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine.serine glyoxylate aminotransferase' 'niben101scf07123_1335-5945' '(at2g13360 : 656.0) Encodes a peroxisomal photorespiratory enzyme that catalyzes transamination reactions with multiple substrates. It is involved in photorespiration.; alanine:glyoxylate aminotransferase (AGT); FUNCTIONS IN: serine-pyruvate transaminase activity, serine-glyoxylate transaminase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: apoplast, peroxisome, plasma membrane, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Aminotransferase class-V pyridoxal-phosphate binding site (InterPro:IPR020578), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); Has 6407 Blast hits to 6405 proteins in 1610 species: Archae - 309; Bacteria - 3905; Metazoa - 186; Fungi - 125; Plants - 148; Viruses - 0; Other Eukaryotes - 1734 (source: NCBI BLink). & (gnl|cdd|38073 : 457.0) no description available & (gnl|cdd|30424 : 355.0) no description available & (p84187|sgat_maize : 100.0) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT) (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) (Fragments) - Zea mays (Maize) & (reliability: 1312.0) & (original description: Putative AGT1, Description = Serine--glyoxylate aminotransferase, PFAM = PF00266)' T '13.1.5.2.11' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine.threonine aldolase' '' '' '13.1.5.2.31' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine.2-amino-3-ketobutyrate coenzym A ligase' '' '' '13.1.5.2.41' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine.sarcosine oxidase' 'niben044scf00040894ctg000_862-4278' '(at2g24580 : 526.0) FAD-dependent oxidoreductase family protein; FUNCTIONS IN: sarcosine oxidase activity; INVOLVED IN: tetrahydrofolate metabolic process, oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076), Sarcosine oxidase, monomeric (InterPro:IPR006281); Has 4031 Blast hits to 4005 proteins in 935 species: Archae - 135; Bacteria - 2670; Metazoa - 148; Fungi - 247; Plants - 60; Viruses - 0; Other Eukaryotes - 771 (source: NCBI BLink). & (gnl|cdd|38031 : 382.0) no description available & (gnl|cdd|83803 : 233.0) no description available & (reliability: 1052.0) & (original description: Putative At2g24580, Description = Probable sarcosine oxidase, PFAM = PF01266)' T '13.1.5.2.1001' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine' 'glycine' 'PS.photorepiration; amino acid synthesis.serine; amino acid synthesis.glycine; amino acid degradation.glycine; redox regulation; nucleotide metabolism.synthesis; C1-metabolism' M '13.1.5.3' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine' 'nbv0.3scaffold69793_4835-8029' '(at5g65720 : 731.0) cysteine desulfurase whose activity is dependent on AtSufE activation.; nitrogen fixation S (NIFS)-like 1 (NFS1); FUNCTIONS IN: transaminase activity, zinc ion binding, cysteine desulfurase activity, ATP binding; INVOLVED IN: iron-sulfur cluster assembly; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Cysteine desulfurase, NifS (InterPro:IPR016454); BEST Arabidopsis thaliana protein match is: chloroplastic NIFS-like cysteine desulfurase (TAIR:AT1G08490.1); Has 19057 Blast hits to 19051 proteins in 2851 species: Archae - 382; Bacteria - 13739; Metazoa - 315; Fungi - 216; Plants - 123; Viruses - 11; Other Eukaryotes - 4271 (source: NCBI BLink). & (gnl|cdd|31301 : 539.0) no description available & (gnl|cdd|36762 : 512.0) no description available & (reliability: 1462.0) & (original description: Putative NFS1, Description = Cysteine desulfurase, mitochondrial, PFAM = PF00266)' T '13.1.5.3' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine' 'nbv0.5scaffold1597_89633-95540' '(at1g18490 : 322.0) Protein of unknown function (DUF1637); FUNCTIONS IN: cysteamine dioxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1637 (InterPro:IPR012864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1637) (TAIR:AT5G39890.1); Has 360 Blast hits to 360 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 102; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|71286 : 277.0) no description available & (gnl|cdd|39482 : 254.0) no description available & (reliability: 644.0) & (original description: Putative PCO3, Description = Plant cysteine oxidase 3, PFAM = PF07847)' T '13.1.5.3' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine' 'niben044scf00000255ctg004_343-3763' '(at5g65720 : 734.0) cysteine desulfurase whose activity is dependent on AtSufE activation.; nitrogen fixation S (NIFS)-like 1 (NFS1); FUNCTIONS IN: transaminase activity, zinc ion binding, cysteine desulfurase activity, ATP binding; INVOLVED IN: iron-sulfur cluster assembly; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Cysteine desulfurase, NifS (InterPro:IPR016454); BEST Arabidopsis thaliana protein match is: chloroplastic NIFS-like cysteine desulfurase (TAIR:AT1G08490.1); Has 19057 Blast hits to 19051 proteins in 2851 species: Archae - 382; Bacteria - 13739; Metazoa - 315; Fungi - 216; Plants - 123; Viruses - 11; Other Eukaryotes - 4271 (source: NCBI BLink). & (gnl|cdd|31301 : 544.0) no description available & (gnl|cdd|36762 : 511.0) no description available & (reliability: 1468.0) & (original description: Putative NIFS1, Description = Cysteine desulfurase, mitochondrial, PFAM = PF00266)' T '13.1.5.3' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine' 'niben101scf02990_219551-222918' '(at5g65720 : 734.0) cysteine desulfurase whose activity is dependent on AtSufE activation.; nitrogen fixation S (NIFS)-like 1 (NFS1); FUNCTIONS IN: transaminase activity, zinc ion binding, cysteine desulfurase activity, ATP binding; INVOLVED IN: iron-sulfur cluster assembly; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Cysteine desulfurase, NifS (InterPro:IPR016454); BEST Arabidopsis thaliana protein match is: chloroplastic NIFS-like cysteine desulfurase (TAIR:AT1G08490.1); Has 19057 Blast hits to 19051 proteins in 2851 species: Archae - 382; Bacteria - 13739; Metazoa - 315; Fungi - 216; Plants - 123; Viruses - 11; Other Eukaryotes - 4271 (source: NCBI BLink). & (gnl|cdd|31301 : 541.0) no description available & (gnl|cdd|36762 : 510.0) no description available & (reliability: 1468.0) & (original description: Putative NIFS1, Description = Cysteine desulfurase, mitochondrial, PFAM = PF00266)' T '13.1.5.3' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine' 'niben101scf23752_23507-29409' '(at1g18490 : 323.0) Protein of unknown function (DUF1637); FUNCTIONS IN: cysteamine dioxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1637 (InterPro:IPR012864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1637) (TAIR:AT5G39890.1); Has 360 Blast hits to 360 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 102; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|71286 : 283.0) no description available & (gnl|cdd|39482 : 259.0) no description available & (reliability: 646.0) & (original description: Putative PCO3, Description = Plant cysteine oxidase 3, PFAM = PF07847)' T '13.1.5.3.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL' 'niben044scf00061791ctg001_2915-8924' '(gnl|cdd|36466 : 426.0) no description available & (q00834|cysk_spiol : 405.0) Cysteine synthase (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase A) (OAS-TL A) - Spinacia oleracea (Spinach) & (at4g14880 : 390.0) Encodes a cytosolic isoform of cytosolic O-acetylserine(thiol)lyase, a key enzyme in cysteine biosynthesis and for the fixation of inorganic sulfide. It catalyzes the formation of cysteine from O-acetylserine and inorganic sulfide. Gene expression is predominant in the root cortex and the xylem parenchyma. Gene expression is induced in leave, stems and roots by high salt and heavy metal stresses, mediated by ABA. Lines carrying semi-dominant mutations exhibit early senescence.; O-acetylserine (thiol) lyase (OAS-TL) isoform A1 (OASA1); CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Cysteine synthase A (InterPro:IPR005859), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Cysteine synthase K/M (InterPro:IPR005856); BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase (OAS-TL) isoform A2 (TAIR:AT3G22460.1). & (gnl|cdd|30381 : 357.0) no description available & (reliability: 780.0) & (original description: Putative cs1, Description = Cysteine synthase, PFAM = PF00291)' T '13.1.5.3.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL' 'niben101scf00167_57558-62553' '(o81154|cysk_soltu : 334.0) Cysteine synthase (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase A) (CS-A) (OAS-TL A) - Solanum tuberosum (Potato) & (gnl|cdd|36466 : 322.0) no description available & (at4g14880 : 310.0) Encodes a cytosolic isoform of cytosolic O-acetylserine(thiol)lyase, a key enzyme in cysteine biosynthesis and for the fixation of inorganic sulfide. It catalyzes the formation of cysteine from O-acetylserine and inorganic sulfide. Gene expression is predominant in the root cortex and the xylem parenchyma. Gene expression is induced in leave, stems and roots by high salt and heavy metal stresses, mediated by ABA. Lines carrying semi-dominant mutations exhibit early senescence.; O-acetylserine (thiol) lyase (OAS-TL) isoform A1 (OASA1); CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Cysteine synthase A (InterPro:IPR005859), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Cysteine synthase K/M (InterPro:IPR005856); BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase (OAS-TL) isoform A2 (TAIR:AT3G22460.1). & (gnl|cdd|30381 : 272.0) no description available & (reliability: 620.0) & (original description: Putative cs1, Description = Cysteine synthase, PFAM = PF00291)' T '13.1.5.3.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL' 'niben101scf00328_830791-836871' '(o81154|cysk_soltu : 505.0) Cysteine synthase (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase A) (CS-A) (OAS-TL A) - Solanum tuberosum (Potato) & (gnl|cdd|36466 : 467.0) no description available & (at4g14880 : 447.0) Encodes a cytosolic isoform of cytosolic O-acetylserine(thiol)lyase, a key enzyme in cysteine biosynthesis and for the fixation of inorganic sulfide. It catalyzes the formation of cysteine from O-acetylserine and inorganic sulfide. Gene expression is predominant in the root cortex and the xylem parenchyma. Gene expression is induced in leave, stems and roots by high salt and heavy metal stresses, mediated by ABA. Lines carrying semi-dominant mutations exhibit early senescence.; O-acetylserine (thiol) lyase (OAS-TL) isoform A1 (OASA1); CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Cysteine synthase A (InterPro:IPR005859), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Cysteine synthase K/M (InterPro:IPR005856); BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase (OAS-TL) isoform A2 (TAIR:AT3G22460.1). & (gnl|cdd|30381 : 391.0) no description available & (reliability: 894.0) & (original description: Putative oas7, Description = Cysteine synthase, PFAM = PF00291)' T '13.1.5.3.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL' 'niben101scf00341_416281-424740' '(at1g55880 : 548.0) Pyridoxal-5'-phosphate-dependent enzyme family protein; FUNCTIONS IN: lyase activity, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: cysteine biosynthetic process from serine, metabolic process, cellular amino acid metabolic process; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: L-cysteine desulfhydrase 1 (TAIR:AT5G28030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36694 : 512.0) no description available & (gnl|cdd|83430 : 390.0) no description available & (q00834|cysk_spiol : 114.0) Cysteine synthase (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase A) (OAS-TL A) - Spinacia oleracea (Spinach) & (reliability: 1096.0) & (original description: Putative cys12, Description = Cysteine synthase 2, PFAM = PF00291)' T '13.1.5.3.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL' 'niben101scf05118_830420-846703' '(at3g61440 : 535.0) Encodes a cysteine synthase isomer CysC1. The isomer is however less effective in cysteine biosynthesis. It is involved in beta-cyanoalanine biosynthesis, an intermediate of cyanide detoxification pathway.; cysteine synthase C1 (CYSC1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase isoform C (TAIR:AT3G59760.3). & (gnl|cdd|36466 : 438.0) no description available & (p32260|cyskp_spiol : 399.0) Cysteine synthase, chloroplast precursor (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase B) (CS-B) (OAS-TL B) - Spinacia oleracea (Spinach) & (gnl|cdd|30381 : 365.0) no description available & (reliability: 1070.0) & (original description: Putative cs1, Description = Cysteine synthase, PFAM = PF00291)' T '13.1.5.3.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL' 'niben101scf05270_158024-166880' '(o81155|cyskp_soltu : 605.0) Cysteine synthase, chloroplast precursor (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase B) (CS-B) (OAS-TL B) - Solanum tuberosum (Potato) & (at3g59760 : 499.0) Arabidopsis thaliana O-acetylserine (thiol) lyase (OAS-TL) isoform oasC; O-acetylserine (thiol) lyase isoform C (OASC); FUNCTIONS IN: protein binding, cysteine synthase activity, zinc ion binding, ATP binding; INVOLVED IN: cysteine biosynthetic process, pollen tube development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Cysteine synthase A (InterPro:IPR005859), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Cysteine synthase K/M (InterPro:IPR005856); BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase B (TAIR:AT2G43750.2); Has 22643 Blast hits to 22626 proteins in 2678 species: Archae - 432; Bacteria - 15847; Metazoa - 414; Fungi - 670; Plants - 570; Viruses - 2; Other Eukaryotes - 4708 (source: NCBI BLink). & (gnl|cdd|36466 : 486.0) no description available & (gnl|cdd|30381 : 402.0) no description available & (reliability: 998.0) & (original description: Putative oas1, Description = Cysteine synthase, PFAM = PF00291)' T '13.1.5.3.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL' 'niben101scf06888_194661-203110' '(o81154|cysk_soltu : 505.0) Cysteine synthase (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase A) (CS-A) (OAS-TL A) - Solanum tuberosum (Potato) & (gnl|cdd|36466 : 465.0) no description available & (at4g14880 : 447.0) Encodes a cytosolic isoform of cytosolic O-acetylserine(thiol)lyase, a key enzyme in cysteine biosynthesis and for the fixation of inorganic sulfide. It catalyzes the formation of cysteine from O-acetylserine and inorganic sulfide. Gene expression is predominant in the root cortex and the xylem parenchyma. Gene expression is induced in leave, stems and roots by high salt and heavy metal stresses, mediated by ABA. Lines carrying semi-dominant mutations exhibit early senescence.; O-acetylserine (thiol) lyase (OAS-TL) isoform A1 (OASA1); CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Cysteine synthase A (InterPro:IPR005859), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Cysteine synthase K/M (InterPro:IPR005856); BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase (OAS-TL) isoform A2 (TAIR:AT3G22460.1). & (gnl|cdd|30381 : 392.0) no description available & (reliability: 894.0) & (original description: Putative oas7, Description = Cysteine synthase, PFAM = PF00291)' T '13.1.5.3.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL' 'niben101scf07327_342115-347864' '(at3g61440 : 524.0) Encodes a cysteine synthase isomer CysC1. The isomer is however less effective in cysteine biosynthesis. It is involved in beta-cyanoalanine biosynthesis, an intermediate of cyanide detoxification pathway.; cysteine synthase C1 (CYSC1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase isoform C (TAIR:AT3G59760.3). & (gnl|cdd|36466 : 440.0) no description available & (o81155|cyskp_soltu : 390.0) Cysteine synthase, chloroplast precursor (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase B) (CS-B) (OAS-TL B) - Solanum tuberosum (Potato) & (gnl|cdd|30381 : 362.0) no description available & (reliability: 1048.0) & (original description: Putative cs1, Description = Cysteine synthase, PFAM = PF00291)' T '13.1.5.3.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL' 'niben101scf11383_9894-15532' '(gnl|cdd|36466 : 450.0) no description available & (q00834|cysk_spiol : 433.0) Cysteine synthase (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase A) (OAS-TL A) - Spinacia oleracea (Spinach) & (at4g14880 : 420.0) Encodes a cytosolic isoform of cytosolic O-acetylserine(thiol)lyase, a key enzyme in cysteine biosynthesis and for the fixation of inorganic sulfide. It catalyzes the formation of cysteine from O-acetylserine and inorganic sulfide. Gene expression is predominant in the root cortex and the xylem parenchyma. Gene expression is induced in leave, stems and roots by high salt and heavy metal stresses, mediated by ABA. Lines carrying semi-dominant mutations exhibit early senescence.; O-acetylserine (thiol) lyase (OAS-TL) isoform A1 (OASA1); CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Cysteine synthase A (InterPro:IPR005859), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Cysteine synthase K/M (InterPro:IPR005856); BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase (OAS-TL) isoform A2 (TAIR:AT3G22460.1). & (gnl|cdd|30381 : 374.0) no description available & (reliability: 840.0) & (original description: Putative cs1, Description = Cysteine synthase, PFAM = PF00291)' T '13.1.5.3.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.SAT' 'niben044scf00005435ctg007_7771-12327' '(at5g56760 : 385.0) Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.; serine acetyltransferase 1;1 (SERAT1;1); FUNCTIONS IN: serine O-acetyltransferase activity; INVOLVED IN: cysteine biosynthetic process from serine; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: serine acetyltransferase 2;2 (TAIR:AT3G13110.1); Has 18874 Blast hits to 18857 proteins in 2524 species: Archae - 292; Bacteria - 13784; Metazoa - 5; Fungi - 219; Plants - 250; Viruses - 18; Other Eukaryotes - 4306 (source: NCBI BLink). & (gnl|cdd|39947 : 356.0) no description available & (gnl|cdd|83739 : 303.0) no description available & (reliability: 770.0) & (original description: Putative sat7, Description = Serine acetyltransferase 7, PFAM = PF06426;PF00132)' T '13.1.5.3.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.SAT' 'niben044scf00018717ctg003_1-3068' '(at3g13110 : 259.0) Encodes a mitochondrial serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.; serine acetyltransferase 2;2 (SERAT2;2); FUNCTIONS IN: zinc ion binding, serine O-acetyltransferase activity; INVOLVED IN: response to cadmium ion, cysteine biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: serine acetyltransferase 2;1 (TAIR:AT1G55920.1); Has 25521 Blast hits to 25511 proteins in 2666 species: Archae - 387; Bacteria - 19255; Metazoa - 8; Fungi - 225; Plants - 240; Viruses - 18; Other Eukaryotes - 5388 (source: NCBI BLink). & (gnl|cdd|39947 : 214.0) no description available & (gnl|cdd|83739 : 171.0) no description available & (reliability: 518.0) & (original description: Putative cysE, Description = Serine acetyltransferase, PFAM = PF06426)' T '13.1.5.3.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.SAT' 'niben101scf00108_303948-308601' '(at5g56760 : 386.0) Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.; serine acetyltransferase 1;1 (SERAT1;1); FUNCTIONS IN: serine O-acetyltransferase activity; INVOLVED IN: cysteine biosynthetic process from serine; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: serine acetyltransferase 2;2 (TAIR:AT3G13110.1); Has 18874 Blast hits to 18857 proteins in 2524 species: Archae - 292; Bacteria - 13784; Metazoa - 5; Fungi - 219; Plants - 250; Viruses - 18; Other Eukaryotes - 4306 (source: NCBI BLink). & (gnl|cdd|39947 : 357.0) no description available & (gnl|cdd|83739 : 302.0) no description available & (reliability: 772.0) & (original description: Putative sat7, Description = Serine acetyltransferase 7, PFAM = PF06426;PF00132)' T '13.1.5.3.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.SAT' 'niben101scf05581_77687-80874' '(at1g55920 : 399.0) Encodes a chloroplast/cytosol localized serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.; serine acetyltransferase 2;1 (SERAT2;1); FUNCTIONS IN: serine O-acetyltransferase activity; INVOLVED IN: cellular response to sulfate starvation, response to cold; LOCATED IN: cytosol, chloroplast, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: serine acetyltransferase 2;2 (TAIR:AT3G13110.1); Has 24449 Blast hits to 24415 proteins in 2638 species: Archae - 407; Bacteria - 18561; Metazoa - 8; Fungi - 223; Plants - 250; Viruses - 18; Other Eukaryotes - 4982 (source: NCBI BLink). & (gnl|cdd|39947 : 347.0) no description available & (gnl|cdd|83739 : 281.0) no description available & (reliability: 774.0) & (original description: Putative sat1, Description = Serine acetyltransferase 1, PFAM = PF00132;PF06426)' T '13.1.5.3.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.SAT' 'niben101scf06263_184546-193415' '(at4g35640 : 418.0) Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. Expression is induced in both roots and shoots under sulfur-starved conditions.; serine acetyltransferase 3;2 (SERAT3;2); CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: Trimeric LpxA-like enzymes superfamily protein (TAIR:AT2G17640.1); Has 22944 Blast hits to 22937 proteins in 2578 species: Archae - 362; Bacteria - 17118; Metazoa - 7; Fungi - 225; Plants - 280; Viruses - 18; Other Eukaryotes - 4934 (source: NCBI BLink). & (gnl|cdd|39947 : 350.0) no description available & (gnl|cdd|83739 : 312.0) no description available & (reliability: 836.0) & (original description: Putative SAT2, Description = Probable serine acetyltransferase 2, PFAM = PF00132;PF06426)' T '13.1.5.3.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.SAT' 'niben101scf16189_65374-68447' '(at3g13110 : 416.0) Encodes a mitochondrial serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.; serine acetyltransferase 2;2 (SERAT2;2); FUNCTIONS IN: zinc ion binding, serine O-acetyltransferase activity; INVOLVED IN: response to cadmium ion, cysteine biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: serine acetyltransferase 2;1 (TAIR:AT1G55920.1); Has 25521 Blast hits to 25511 proteins in 2666 species: Archae - 387; Bacteria - 19255; Metazoa - 8; Fungi - 225; Plants - 240; Viruses - 18; Other Eukaryotes - 5388 (source: NCBI BLink). & (gnl|cdd|39947 : 349.0) no description available & (gnl|cdd|83739 : 286.0) no description available & (reliability: 832.0) & (original description: Putative sat4, Description = Serine acetyltransferase 4, PFAM = PF06426;PF00132;PF00132)' T '13.1.5.3.1001' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine' 'o-acetyl-serine' 'amino acid synthesis.cysteine; S-assimilation' M '13.1.5.3.1002' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine' 'adenosine 5'-phosphosulfate' 'amino acid synthesis.cysteine; S-assimilation' M '13.1.5.3.1003' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine' 's-methylcysteine' 'amino acid synthesis.cysteine; S-assimilation, storage form of sulfur in the seeds of several legume species' M '13.1.5.3.1004' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine' 'cysteine' 'amino acid synthesis.cysteine; S-assimilation' M '13.1.6' 'amino acid metabolism.synthesis.aromatic aa' '' '' '13.1.6.1' 'amino acid metabolism.synthesis.aromatic aa.chorismate' '' '' '13.1.6.1.1' 'amino acid metabolism.synthesis.aromatic aa.chorismate.3-deoxy-D-arabino-heptulosonate 7-phosphate synthase' 'niben044scf00059091ctg001_14673-19481' '(p27608|arof_tobac : 898.0) Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 1) (DAHP synthetase 1) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1) - Nicotiana tabacum (Common tob & (at1g22410 : 848.0) Class-II DAHP synthetase family protein; FUNCTIONS IN: 3-deoxy-7-phosphoheptulonate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DAHP synthetase, class II (InterPro:IPR002480); BEST Arabidopsis thaliana protein match is: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 (TAIR:AT4G39980.1); Has 3811 Blast hits to 3796 proteins in 685 species: Archae - 0; Bacteria - 1237; Metazoa - 0; Fungi - 110; Plants - 171; Viruses - 0; Other Eukaryotes - 2293 (source: NCBI BLink). & (gnl|cdd|65283 : 702.0) no description available & (reliability: 1696.0) & (original description: Putative SHKA, Description = Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic, PFAM = PF01474)' T '13.1.6.1.1' 'amino acid metabolism.synthesis.aromatic aa.chorismate.3-deoxy-D-arabino-heptulosonate 7-phosphate synthase' 'niben101scf01005_1190079-1199843' '(at4g33510 : 849.0) Enzyme catalyzing the first committed step in aromatic amino acid biosynthesis; 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase (DHS2); FUNCTIONS IN: protein binding, 3-deoxy-7-phosphoheptulonate synthase activity; INVOLVED IN: chorismate biosynthetic process, aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DAHP synthetase, class II (InterPro:IPR002480); BEST Arabidopsis thaliana protein match is: Class-II DAHP synthetase family protein (TAIR:AT1G22410.1); Has 3601 Blast hits to 3584 proteins in 682 species: Archae - 0; Bacteria - 1231; Metazoa - 0; Fungi - 107; Plants - 172; Viruses - 0; Other Eukaryotes - 2091 (source: NCBI BLink). & (p37822|arog_soltu : 840.0) Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplast precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 2) (DAHP synthetase 2) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 2) - Solanum tuberosum (Potato) & (gnl|cdd|65283 : 704.0) no description available & (reliability: 1698.0) & (original description: Putative DHS2, Description = Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic, PFAM = PF01474)' T '13.1.6.1.1' 'amino acid metabolism.synthesis.aromatic aa.chorismate.3-deoxy-D-arabino-heptulosonate 7-phosphate synthase' 'niben101scf02537_385602-391369' '(p27608|arof_tobac : 1016.0) Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 1) (DAHP synthetase 1) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1) - Nicotiana tabacum (Common tob & (at1g22410 : 857.0) Class-II DAHP synthetase family protein; FUNCTIONS IN: 3-deoxy-7-phosphoheptulonate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DAHP synthetase, class II (InterPro:IPR002480); BEST Arabidopsis thaliana protein match is: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 (TAIR:AT4G39980.1); Has 3811 Blast hits to 3796 proteins in 685 species: Archae - 0; Bacteria - 1237; Metazoa - 0; Fungi - 110; Plants - 171; Viruses - 0; Other Eukaryotes - 2293 (source: NCBI BLink). & (gnl|cdd|65283 : 694.0) no description available & (reliability: 1714.0) & (original description: Putative SHKA, Description = Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic, PFAM = PF01474)' T '13.1.6.1.1' 'amino acid metabolism.synthesis.aromatic aa.chorismate.3-deoxy-D-arabino-heptulosonate 7-phosphate synthase' 'niben101scf07573_46434-52423' '(p37822|arog_soltu : 973.0) Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplast precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 2) (DAHP synthetase 2) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 2) - Solanum tuberosum (Potato) & (at4g39980 : 845.0) Encodes a 2-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase, which catalyzes the first committed step in aromatic amino acid biosynthesis. Gene expression is induced by wounding and pathogenic bacteria Pseudomonas syringae.; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 (DHS1); CONTAINS InterPro DOMAIN/s: DAHP synthetase, class II (InterPro:IPR002480); BEST Arabidopsis thaliana protein match is: Class-II DAHP synthetase family protein (TAIR:AT1G22410.1); Has 3797 Blast hits to 3784 proteins in 681 species: Archae - 0; Bacteria - 1224; Metazoa - 0; Fungi - 110; Plants - 172; Viruses - 0; Other Eukaryotes - 2291 (source: NCBI BLink). & (gnl|cdd|65283 : 702.0) no description available & (reliability: 1690.0) & (original description: Putative aroF, Description = Phospho-2-dehydro-3-deoxyheptonate aldolase, PFAM = PF01474)' T '13.1.6.1.1' 'amino acid metabolism.synthesis.aromatic aa.chorismate.3-deoxy-D-arabino-heptulosonate 7-phosphate synthase' 'niben101scf11865_221691-227048' '(p27608|arof_tobac : 888.0) Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 1) (DAHP synthetase 1) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1) - Nicotiana tabacum (Common tob & (at1g22410 : 848.0) Class-II DAHP synthetase family protein; FUNCTIONS IN: 3-deoxy-7-phosphoheptulonate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DAHP synthetase, class II (InterPro:IPR002480); BEST Arabidopsis thaliana protein match is: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 (TAIR:AT4G39980.1); Has 3811 Blast hits to 3796 proteins in 685 species: Archae - 0; Bacteria - 1237; Metazoa - 0; Fungi - 110; Plants - 171; Viruses - 0; Other Eukaryotes - 2293 (source: NCBI BLink). & (gnl|cdd|65283 : 702.0) no description available & (reliability: 1696.0) & (original description: Putative SHKA, Description = Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic, PFAM = PF01474)' T '13.1.6.1.2' 'amino acid metabolism.synthesis.aromatic aa.chorismate.3-dehydroquinate synthase' 'nbv0.5scaffold1762_179680-186816' '(at5g66120 : 639.0) 3-dehydroquinate synthase, putative; FUNCTIONS IN: 3-dehydroquinate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase AroB, subgroup (InterPro:IPR016037), 3-dehydroquinate synthase AroB (InterPro:IPR002658); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80438 : 486.0) no description available & (gnl|cdd|35911 : 107.0) no description available & (reliability: 1278.0) & (original description: Putative DHQS, Description = 3-dehydroquinate synthase, chloroplastic, PFAM = PF01761)' T '13.1.6.1.2' 'amino acid metabolism.synthesis.aromatic aa.chorismate.3-dehydroquinate synthase' 'niben101scf07250_127947-135136' '(at5g66120 : 629.0) 3-dehydroquinate synthase, putative; FUNCTIONS IN: 3-dehydroquinate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase AroB, subgroup (InterPro:IPR016037), 3-dehydroquinate synthase AroB (InterPro:IPR002658); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80438 : 490.0) no description available & (gnl|cdd|35911 : 106.0) no description available & (reliability: 1258.0) & (original description: Putative DHQS, Description = 3-dehydroquinate synthase, chloroplastic, PFAM = PF01761)' T '13.1.6.1.3' 'amino acid metabolism.synthesis.aromatic aa.chorismate.3-dehydroquinate dehydratase' '' '' '13.1.6.1.4' 'amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate dehydrogenase' '' '' '13.1.6.1.5' 'amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase' 'nbv0.3scaffold15020_1-8881' '(at2g21940 : 309.0) shikimate kinase 1 (SK1); FUNCTIONS IN: shikimate kinase activity, ATP binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623); BEST Arabidopsis thaliana protein match is: shikimate kinase 2 (TAIR:AT4G39540.2); Has 7831 Blast hits to 7831 proteins in 2412 species: Archae - 26; Bacteria - 5482; Metazoa - 44; Fungi - 134; Plants - 162; Viruses - 0; Other Eukaryotes - 1983 (source: NCBI BLink). & (gnl|cdd|30188 : 157.0) no description available & (reliability: 618.0) & (original description: Putative SK, Description = Shikimate kinase, chloroplastic, PFAM = PF01202)' T '13.1.6.1.5' 'amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase' 'nbv0.3scaffold32627_1-4013' '(at3g26900 : 244.0) shikimate kinase like 1 (SKL1); FUNCTIONS IN: shikimate kinase activity, ATP binding; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623); BEST Arabidopsis thaliana protein match is: shikimate kinase 1 (TAIR:AT2G21940.5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30188 : 98.7) no description available & (reliability: 488.0) & (original description: Putative SKL1, Description = Probable inactive shikimate kinase like 1, chloroplastic, PFAM = PF01202)' T '13.1.6.1.5' 'amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase' 'nbv0.3scaffold70656_2445-6587' '(at3g26900 : 215.0) shikimate kinase like 1 (SKL1); FUNCTIONS IN: shikimate kinase activity, ATP binding; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623); BEST Arabidopsis thaliana protein match is: shikimate kinase 1 (TAIR:AT2G21940.5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30188 : 87.6) no description available & (reliability: 430.0) & (original description: Putative SK2, Description = Shikimate kinase family protein, PFAM = PF01202)' T '13.1.6.1.5' 'amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase' 'nbv0.5scaffold3618_207085-211227' '(at3g26900 : 215.0) shikimate kinase like 1 (SKL1); FUNCTIONS IN: shikimate kinase activity, ATP binding; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623); BEST Arabidopsis thaliana protein match is: shikimate kinase 1 (TAIR:AT2G21940.5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30188 : 87.6) no description available & (reliability: 430.0) & (original description: Putative SKL1, Description = Putative inactive shikimate kinase like 1, chloroplastic, PFAM = PF01202)' T '13.1.6.1.5' 'amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase' 'niben044scf00004401ctg010_13031-17361' '(at3g26900 : 238.0) shikimate kinase like 1 (SKL1); FUNCTIONS IN: shikimate kinase activity, ATP binding; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623); BEST Arabidopsis thaliana protein match is: shikimate kinase 1 (TAIR:AT2G21940.5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30188 : 99.5) no description available & (reliability: 476.0) & (original description: Putative SKL1, Description = Putative inactive shikimate kinase like 1, chloroplastic, PFAM = PF01202)' T '13.1.6.1.5' 'amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase' 'niben101scf00109_236897-241117' '(at3g26900 : 213.0) shikimate kinase like 1 (SKL1); FUNCTIONS IN: shikimate kinase activity, ATP binding; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623); BEST Arabidopsis thaliana protein match is: shikimate kinase 1 (TAIR:AT2G21940.5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30188 : 91.0) no description available & (reliability: 426.0) & (original description: Putative SKL1, Description = Putative inactive shikimate kinase like 1, chloroplastic, PFAM = PF01202)' T '13.1.6.1.5' 'amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase' 'niben101scf00578_297947-301141' '(at2g16790 : 117.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: shikimate kinase activity, kinase activity, ATP binding; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623), Carbohydrate kinase, thermoresistant glucokinase (InterPro:IPR006001); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38564 : 111.0) no description available & (gnl|cdd|30194 : 103.0) no description available & (reliability: 234.0) & (original description: Putative gntK, Description = Gluconokinase, PFAM = PF01202)' T '13.1.6.1.5' 'amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase' 'niben101scf01055_96577-100719' '(at3g26900 : 241.0) shikimate kinase like 1 (SKL1); FUNCTIONS IN: shikimate kinase activity, ATP binding; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623); BEST Arabidopsis thaliana protein match is: shikimate kinase 1 (TAIR:AT2G21940.5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30188 : 95.3) no description available & (reliability: 482.0) & (original description: Putative SKL1, Description = Probable inactive shikimate kinase like 1, chloroplastic, PFAM = PF01202)' T '13.1.6.1.5' 'amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase' 'niben101scf01822_950149-958593' '(at2g35500 : 407.0) shikimate kinase like 2 (SKL2); FUNCTIONS IN: shikimate kinase activity, ATP binding; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), Shikimate kinase (InterPro:IPR000623), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); Has 380 Blast hits to 380 proteins in 88 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (reliability: 814.0) & (original description: Putative SKL2, Description = Probable inactive shikimate kinase like 2, chloroplastic, PFAM = PF04969;PF01202)' T '13.1.6.1.5' 'amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase' 'niben101scf04812_146930-153579' '(at2g35500 : 407.0) shikimate kinase like 2 (SKL2); FUNCTIONS IN: shikimate kinase activity, ATP binding; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), Shikimate kinase (InterPro:IPR000623), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); Has 380 Blast hits to 380 proteins in 88 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (reliability: 814.0) & (original description: Putative SKL2, Description = Probable inactive shikimate kinase like 2, chloroplastic, PFAM = PF04969;PF01202)' T '13.1.6.1.5' 'amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase' 'niben101scf05111_66469-79240' '(at2g21940 : 311.0) shikimate kinase 1 (SK1); FUNCTIONS IN: shikimate kinase activity, ATP binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623); BEST Arabidopsis thaliana protein match is: shikimate kinase 2 (TAIR:AT4G39540.2); Has 7831 Blast hits to 7831 proteins in 2412 species: Archae - 26; Bacteria - 5482; Metazoa - 44; Fungi - 134; Plants - 162; Viruses - 0; Other Eukaryotes - 1983 (source: NCBI BLink). & (gnl|cdd|30188 : 161.0) no description available & (reliability: 622.0) & (original description: Putative SK, Description = Shikimate kinase, chloroplastic, PFAM = PF01202)' T '13.1.6.1.6' 'amino acid metabolism.synthesis.aromatic aa.chorismate.5-enolpyruvylshikimate-3-phosphate synthase' 'niben044scf00000223ctg003_2895-10641' '(p23981|aroa1_tobac : 926.0) 3-phosphoshikimate 1-carboxyvinyltransferase 1, chloroplast precursor (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase 1) (EPSP synthase 1) - Nicotiana tabacum (Common tobacco) & (at2g45300 : 701.0) encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis; RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta; FUNCTIONS IN: 3-phosphoshikimate 1-carboxyvinyltransferase activity; INVOLVED IN: glyphosate metabolic process, chorismate biosynthetic process, aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: 3-phosphoshikimate 1-carboxyvinyltransferase, core (InterPro:IPR001986), 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup (InterPro:IPR006264), RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (InterPro:IPR013792); BEST Arabidopsis thaliana protein match is: RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (TAIR:AT1G48860.1); Has 13824 Blast hits to 13779 proteins in 2767 species: Archae - 215; Bacteria - 9594; Metazoa - 6; Fungi - 149; Plants - 206; Viruses - 0; Other Eukaryotes - 3654 (source: NCBI BLink). & (gnl|cdd|35911 : 565.0) no description available & (gnl|cdd|84005 : 489.0) no description available & (reliability: 1402.0) & (original description: Putative aroA, Description = 3-phosphoshikimate 1-carboxyvinyltransferase, PFAM = PF00275)' T '13.1.6.1.6' 'amino acid metabolism.synthesis.aromatic aa.chorismate.5-enolpyruvylshikimate-3-phosphate synthase' 'niben101scf00603_873564-876364' '(p23981|aroa1_tobac : 147.0) 3-phosphoshikimate 1-carboxyvinyltransferase 1, chloroplast precursor (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase 1) (EPSP synthase 1) - Nicotiana tabacum (Common tobacco) & (at2g45300 : 131.0) encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis; RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta; FUNCTIONS IN: 3-phosphoshikimate 1-carboxyvinyltransferase activity; INVOLVED IN: glyphosate metabolic process, chorismate biosynthetic process, aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: 3-phosphoshikimate 1-carboxyvinyltransferase, core (InterPro:IPR001986), 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup (InterPro:IPR006264), RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (InterPro:IPR013792); BEST Arabidopsis thaliana protein match is: RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (TAIR:AT1G48860.1); Has 13824 Blast hits to 13779 proteins in 2767 species: Archae - 215; Bacteria - 9594; Metazoa - 6; Fungi - 149; Plants - 206; Viruses - 0; Other Eukaryotes - 3654 (source: NCBI BLink). & (gnl|cdd|35911 : 97.8) no description available & (reliability: 262.0) & (original description: Putative aroA, Description = 3-phosphoshikimate 1-carboxyvinyltransferase, PFAM = PF00275)' T '13.1.6.1.6' 'amino acid metabolism.synthesis.aromatic aa.chorismate.5-enolpyruvylshikimate-3-phosphate synthase' 'niben101scf04703_1119733-1134560' '(p23981|aroa1_tobac : 956.0) 3-phosphoshikimate 1-carboxyvinyltransferase 1, chloroplast precursor (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase 1) (EPSP synthase 1) - Nicotiana tabacum (Common tobacco) & (at2g45300 : 738.0) encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis; RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta; FUNCTIONS IN: 3-phosphoshikimate 1-carboxyvinyltransferase activity; INVOLVED IN: glyphosate metabolic process, chorismate biosynthetic process, aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: 3-phosphoshikimate 1-carboxyvinyltransferase, core (InterPro:IPR001986), 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup (InterPro:IPR006264), RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (InterPro:IPR013792); BEST Arabidopsis thaliana protein match is: RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (TAIR:AT1G48860.1); Has 13824 Blast hits to 13779 proteins in 2767 species: Archae - 215; Bacteria - 9594; Metazoa - 6; Fungi - 149; Plants - 206; Viruses - 0; Other Eukaryotes - 3654 (source: NCBI BLink). & (gnl|cdd|35911 : 570.0) no description available & (gnl|cdd|84005 : 491.0) no description available & (reliability: 1476.0) & (original description: Putative aroA, Description = 3-phosphoshikimate 1-carboxyvinyltransferase, PFAM = PF00275)' T '13.1.6.1.7' 'amino acid metabolism.synthesis.aromatic aa.chorismate.chorismate synthase' 'nbv0.3scaffold1112_981-11654' '(gnl|cdd|39692 : 545.0) no description available & (at1g48850 : 527.0) embryo defective 1144 (EMB1144); FUNCTIONS IN: chorismate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chorismate synthase, conserved site (InterPro:IPR020541), Chorismate synthase (InterPro:IPR000453); BEST Arabidopsis thaliana protein match is: RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (TAIR:AT1G48860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85347 : 517.0) no description available & (reliability: 1054.0) & (original description: Putative pco087106a, Description = Chorismate synthase, PFAM = PF01264)' T '13.1.6.1.7' 'amino acid metabolism.synthesis.aromatic aa.chorismate.chorismate synthase' 'niben101scf00409_10111-22410' '(gnl|cdd|39692 : 603.0) no description available & (at1g48850 : 588.0) embryo defective 1144 (EMB1144); FUNCTIONS IN: chorismate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chorismate synthase, conserved site (InterPro:IPR020541), Chorismate synthase (InterPro:IPR000453); BEST Arabidopsis thaliana protein match is: RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (TAIR:AT1G48860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85347 : 562.0) no description available & (reliability: 1176.0) & (original description: Putative CS1, Description = Chorismate synthase 1, chloroplastic, PFAM = PF01264)' T '13.1.6.1.7' 'amino acid metabolism.synthesis.aromatic aa.chorismate.chorismate synthase' 'niben101scf04907_128536-140166' '(gnl|cdd|39692 : 603.0) no description available & (at1g48850 : 590.0) embryo defective 1144 (EMB1144); FUNCTIONS IN: chorismate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chorismate synthase, conserved site (InterPro:IPR020541), Chorismate synthase (InterPro:IPR000453); BEST Arabidopsis thaliana protein match is: RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (TAIR:AT1G48860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85347 : 561.0) no description available & (reliability: 1180.0) & (original description: Putative CS1, Description = Chorismate synthase 1, chloroplastic, PFAM = PF01264)' T '13.1.6.1.10' 'amino acid metabolism.synthesis.aromatic aa.chorismate.dehydroquinate/shikimate dehydrogenase' 'niben101scf00247_462459-471503' '(at3g06350 : 405.0) MATERNAL EFFECT EMBRYO ARREST 32 (MEE32); FUNCTIONS IN: NADP or NADPH binding, 3-dehydroquinate dehydratase activity, shikimate 5-dehydrogenase activity, binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Aldolase-type TIM barrel (InterPro:IPR013785), Quinate/shikimate 5-dehydrogenase (InterPro:IPR011342), NAD(P)-binding domain (InterPro:IPR016040), Dehydroquinase class I (InterPro:IPR001381), Shikimate dehydrogenase substrate binding, N-terminal (InterPro:IPR013708); Has 14455 Blast hits to 14453 proteins in 2669 species: Archae - 507; Bacteria - 10604; Metazoa - 0; Fungi - 391; Plants - 114; Viruses - 0; Other Eukaryotes - 2839 (source: NCBI BLink). & (gnl|cdd|30518 : 249.0) no description available & (gnl|cdd|35911 : 216.0) no description available & (reliability: 810.0) & (original description: Putative sad1, Description = Shikimate dehydrogenase, PFAM = PF01488;PF08501;PF01487)' T '13.1.6.1.10' 'amino acid metabolism.synthesis.aromatic aa.chorismate.dehydroquinate/shikimate dehydrogenase' 'niben101scf01740_1263967-1271760' '(at3g06350 : 474.0) MATERNAL EFFECT EMBRYO ARREST 32 (MEE32); FUNCTIONS IN: NADP or NADPH binding, 3-dehydroquinate dehydratase activity, shikimate 5-dehydrogenase activity, binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Aldolase-type TIM barrel (InterPro:IPR013785), Quinate/shikimate 5-dehydrogenase (InterPro:IPR011342), NAD(P)-binding domain (InterPro:IPR016040), Dehydroquinase class I (InterPro:IPR001381), Shikimate dehydrogenase substrate binding, N-terminal (InterPro:IPR013708); Has 14455 Blast hits to 14453 proteins in 2669 species: Archae - 507; Bacteria - 10604; Metazoa - 0; Fungi - 391; Plants - 114; Viruses - 0; Other Eukaryotes - 2839 (source: NCBI BLink). & (gnl|cdd|35911 : 257.0) no description available & (gnl|cdd|30518 : 243.0) no description available & (reliability: 948.0) & (original description: Putative sad1, Description = Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic, PFAM = PF01487;PF08501)' T '13.1.6.1.10' 'amino acid metabolism.synthesis.aromatic aa.chorismate.dehydroquinate/shikimate dehydrogenase' 'niben101scf02709_410461-421887' '(at3g06350 : 675.0) MATERNAL EFFECT EMBRYO ARREST 32 (MEE32); FUNCTIONS IN: NADP or NADPH binding, 3-dehydroquinate dehydratase activity, shikimate 5-dehydrogenase activity, binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Aldolase-type TIM barrel (InterPro:IPR013785), Quinate/shikimate 5-dehydrogenase (InterPro:IPR011342), NAD(P)-binding domain (InterPro:IPR016040), Dehydroquinase class I (InterPro:IPR001381), Shikimate dehydrogenase substrate binding, N-terminal (InterPro:IPR013708); Has 14455 Blast hits to 14453 proteins in 2669 species: Archae - 507; Bacteria - 10604; Metazoa - 0; Fungi - 391; Plants - 114; Viruses - 0; Other Eukaryotes - 2839 (source: NCBI BLink). & (gnl|cdd|35911 : 413.0) no description available & (gnl|cdd|30518 : 258.0) no description available & (reliability: 1350.0) & (original description: Putative aroE, Description = Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic, PFAM = PF01487;PF01488;PF08501)' T '13.1.6.1.10' 'amino acid metabolism.synthesis.aromatic aa.chorismate.dehydroquinate/shikimate dehydrogenase' 'niben101scf04146_171553-181321' '(at3g06350 : 470.0) MATERNAL EFFECT EMBRYO ARREST 32 (MEE32); FUNCTIONS IN: NADP or NADPH binding, 3-dehydroquinate dehydratase activity, shikimate 5-dehydrogenase activity, binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Aldolase-type TIM barrel (InterPro:IPR013785), Quinate/shikimate 5-dehydrogenase (InterPro:IPR011342), NAD(P)-binding domain (InterPro:IPR016040), Dehydroquinase class I (InterPro:IPR001381), Shikimate dehydrogenase substrate binding, N-terminal (InterPro:IPR013708); Has 14455 Blast hits to 14453 proteins in 2669 species: Archae - 507; Bacteria - 10604; Metazoa - 0; Fungi - 391; Plants - 114; Viruses - 0; Other Eukaryotes - 2839 (source: NCBI BLink). & (gnl|cdd|35911 : 276.0) no description available & (gnl|cdd|85486 : 229.0) no description available & (reliability: 940.0) & (original description: Putative aroD, Description = Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic, PFAM = PF01487;PF08501)' T '13.1.6.1.1001' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine' 'shikimate' 'amino acid synthesis.phenylalanine; amino acid synthesis.tryptophan; amino acid synthesis.tyrosine' M '13.1.6.1.1002' 'amino acid metabolism.synthesis.aromatic aa.chorismate' 'chorismate' 'amino acid synthesis.phenylalanine; amino acid synthesis.tryptophan; amino acid synthesis.tyrosine' M '13.1.6.2' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine' 'niben101scf02572_340137-346981' '(at1g80360 : 593.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, transaminase activity, catalytic activity; INVOLVED IN: asparagine catabolic process, biosynthetic process, glutamate catabolic process to oxaloacetate, aspartate transamidation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase (TAIR:AT2G22250.1); Has 39039 Blast hits to 39038 proteins in 3030 species: Archae - 1022; Bacteria - 27880; Metazoa - 604; Fungi - 771; Plants - 1310; Viruses - 0; Other Eukaryotes - 7452 (source: NCBI BLink). & (gnl|cdd|35478 : 315.0) no description available & (gnl|cdd|81800 : 264.0) no description available & (q00257|1a12_cucma : 90.9) 1-aminocyclopropane-1-carboxylate synthase CMA101 (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 1186.0) & (original description: Putative ast2, Description = Aspartate aminotransferase, PFAM = PF00155)' T '13.1.6.2' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine' 'niben101scf04547_205107-226421' '(at2g13810 : 528.0) AGD2-like defense response protein 1 (ALD1); FUNCTIONS IN: transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, transaminase activity, catalytic activity; INVOLVED IN: asparagine catabolic process, biosynthetic process, glutamate catabolic process to oxaloacetate, aspartate transamidation; LOCATED IN: chloroplast; EXPRESSED IN: sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: LL-diaminopimelate aminotransferase, plant-related (InterPro:IPR019942), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT4G33680.1); Has 32741 Blast hits to 32741 proteins in 2900 species: Archae - 975; Bacteria - 23252; Metazoa - 372; Fungi - 435; Plants - 591; Viruses - 0; Other Eukaryotes - 7116 (source: NCBI BLink). & (gnl|cdd|82293 : 472.0) no description available & (gnl|cdd|35478 : 351.0) no description available & (reliability: 1056.0) & (original description: Putative ALD1, Description = Aminotransferase ALD1, PFAM = PF00155)' T '13.1.6.2' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine' 'niben101scf18107_3598-10616' '(at1g80360 : 591.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, transaminase activity, catalytic activity; INVOLVED IN: asparagine catabolic process, biosynthetic process, glutamate catabolic process to oxaloacetate, aspartate transamidation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase (TAIR:AT2G22250.1); Has 39039 Blast hits to 39038 proteins in 3030 species: Archae - 1022; Bacteria - 27880; Metazoa - 604; Fungi - 771; Plants - 1310; Viruses - 0; Other Eukaryotes - 7452 (source: NCBI BLink). & (gnl|cdd|35478 : 316.0) no description available & (gnl|cdd|81800 : 264.0) no description available & (q00257|1a12_cucma : 86.7) 1-aminocyclopropane-1-carboxylate synthase CMA101 (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 1182.0) & (original description: Putative ast2, Description = Aspartate aminotransferase, PFAM = PF00155)' T '13.1.6.2.1' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine.chorismate mutase' 'nbv0.5scaffold2438_172706-189990' '(gnl|cdd|36014 : 306.0) no description available & (at5g10870 : 278.0) Encodes chorismate mutase AtCM2.; chorismate mutase 2 (CM2); CONTAINS InterPro DOMAIN/s: Chorismate mutase, type II (InterPro:IPR020822), Chorismate mutase, AroQ class, eukaryotic type (InterPro:IPR008238); BEST Arabidopsis thaliana protein match is: chorismate mutase 3 (TAIR:AT1G69370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 556.0) & (original description: Putative cm, Description = Chorismate mutase, PFAM = )' T '13.1.6.2.1' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine.chorismate mutase' 'niben101scf04763_225506-228017' '(gnl|cdd|36014 : 162.0) no description available & (at3g29200 : 161.0) L-ascorbate peroxidase; chorismate mutase 1 (CM1); CONTAINS InterPro DOMAIN/s: Chorismate mutase, type II (InterPro:IPR020822), Chorismate mutase, AroQ class, eukaryotic type (InterPro:IPR008238); BEST Arabidopsis thaliana protein match is: chorismate mutase 3 (TAIR:AT1G69370.1); Has 278 Blast hits to 278 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 142; Plants - 118; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative cm, Description = Chorismate mutase, PFAM = )' T '13.1.6.2.1' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine.chorismate mutase' 'niben101scf06026_184023-190567' '(gnl|cdd|36014 : 392.0) no description available & (at3g29200 : 373.0) L-ascorbate peroxidase; chorismate mutase 1 (CM1); CONTAINS InterPro DOMAIN/s: Chorismate mutase, type II (InterPro:IPR020822), Chorismate mutase, AroQ class, eukaryotic type (InterPro:IPR008238); BEST Arabidopsis thaliana protein match is: chorismate mutase 3 (TAIR:AT1G69370.1); Has 278 Blast hits to 278 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 142; Plants - 118; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 746.0) & (original description: Putative CM1, Description = Chorismate mutase 1, chloroplastic, PFAM = )' T '13.1.6.2.2' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine.glutamate—prephenate aminotransferase' '' '' '13.1.6.3' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine' '' '' '13.1.6.3.1' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine.arogenate dehydratase / prephenate dehydratase' 'nbv0.3scaffold34193_7830-11116' '(at1g08250 : 583.0) Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Although this enzyme has sequence similarity to prephenate dehydratases, it is 98 times more active with arogenate than prephenate in enzymatic assays.; arogenate dehydratase 6 (ADT6); FUNCTIONS IN: arogenate dehydratase activity, prephenate dehydratase activity; INVOLVED IN: L-phenylalanine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydratase (InterPro:IPR001086), Prephenate dehydratase, conserved site (InterPro:IPR018528); BEST Arabidopsis thaliana protein match is: prephenate dehydratase 1 (TAIR:AT2G27820.1); Has 7065 Blast hits to 7063 proteins in 2215 species: Archae - 179; Bacteria - 3948; Metazoa - 2; Fungi - 121; Plants - 264; Viruses - 0; Other Eukaryotes - 2551 (source: NCBI BLink). & (gnl|cdd|38008 : 523.0) no description available & (gnl|cdd|30426 : 286.0) no description available & (reliability: 1166.0) & (original description: Putative pd2, Description = Arogenate dehydratase, PFAM = PF00800)' T '13.1.6.3.1' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine.arogenate dehydratase / prephenate dehydratase' 'niben101scf05382_27031-30329' '(at1g08250 : 582.0) Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Although this enzyme has sequence similarity to prephenate dehydratases, it is 98 times more active with arogenate than prephenate in enzymatic assays.; arogenate dehydratase 6 (ADT6); FUNCTIONS IN: arogenate dehydratase activity, prephenate dehydratase activity; INVOLVED IN: L-phenylalanine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydratase (InterPro:IPR001086), Prephenate dehydratase, conserved site (InterPro:IPR018528); BEST Arabidopsis thaliana protein match is: prephenate dehydratase 1 (TAIR:AT2G27820.1); Has 7065 Blast hits to 7063 proteins in 2215 species: Archae - 179; Bacteria - 3948; Metazoa - 2; Fungi - 121; Plants - 264; Viruses - 0; Other Eukaryotes - 2551 (source: NCBI BLink). & (gnl|cdd|38008 : 522.0) no description available & (gnl|cdd|30426 : 282.0) no description available & (reliability: 1164.0) & (original description: Putative pheA, Description = Prephenate dehydratase, PFAM = PF00800)' T '13.1.6.3.1' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine.arogenate dehydratase / prephenate dehydratase' 'niben101scf05656_95009-99828' '(at1g08250 : 580.0) Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Although this enzyme has sequence similarity to prephenate dehydratases, it is 98 times more active with arogenate than prephenate in enzymatic assays.; arogenate dehydratase 6 (ADT6); FUNCTIONS IN: arogenate dehydratase activity, prephenate dehydratase activity; INVOLVED IN: L-phenylalanine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydratase (InterPro:IPR001086), Prephenate dehydratase, conserved site (InterPro:IPR018528); BEST Arabidopsis thaliana protein match is: prephenate dehydratase 1 (TAIR:AT2G27820.1); Has 7065 Blast hits to 7063 proteins in 2215 species: Archae - 179; Bacteria - 3948; Metazoa - 2; Fungi - 121; Plants - 264; Viruses - 0; Other Eukaryotes - 2551 (source: NCBI BLink). & (gnl|cdd|38008 : 521.0) no description available & (gnl|cdd|30426 : 285.0) no description available & (reliability: 1160.0) & (original description: Putative pd2, Description = Arogenate dehydratase, PFAM = PF00800)' T '13.1.6.3.1' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine.arogenate dehydratase / prephenate dehydratase' 'niben101scf08991_135560-144115' '(at1g11790 : 537.0) Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identified in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250].; arogenate dehydratase 1 (ADT1); FUNCTIONS IN: arogenate dehydratase activity, prephenate dehydratase activity; INVOLVED IN: L-phenylalanine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydratase (InterPro:IPR001086), Prephenate dehydratase, conserved site (InterPro:IPR018528); BEST Arabidopsis thaliana protein match is: arogenate dehydratase 2 (TAIR:AT3G07630.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38008 : 447.0) no description available & (gnl|cdd|30426 : 288.0) no description available & (reliability: 1074.0) & (original description: Putative ADT1, Description = Arogenate dehydratase/prephenate dehydratase 1, chloroplastic, PFAM = PF00800)' T '13.1.6.3.1' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine.arogenate dehydratase / prephenate dehydratase' 'niben101scf14634_255705-263871' '(at3g07630 : 493.0) Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identified in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250].; arogenate dehydratase 2 (ADT2); FUNCTIONS IN: arogenate dehydratase activity, prephenate dehydratase activity; INVOLVED IN: L-phenylalanine biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydratase (InterPro:IPR001086), Amino acid-binding ACT (InterPro:IPR002912), Prephenate dehydratase, conserved site (InterPro:IPR018528); BEST Arabidopsis thaliana protein match is: arogenate dehydratase 1 (TAIR:AT1G11790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38008 : 434.0) no description available & (gnl|cdd|30426 : 289.0) no description available & (reliability: 986.0) & (original description: Putative pd1, Description = Arogenate dehydratase, PFAM = PF00800)' T '13.1.6.3.1001' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine' 'prephenate' 'amino acid synthesis.phenylalanine; amino acid synthesis.tryptophan; amino acid synthesis.tyrosine' M '13.1.6.3.1002' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine' 'phenylalanine' 'amino acid synthesis.phenylalanine; amino acid degradation.phenylalanine; secondary metabolism' M '13.1.6.3.1003' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine' 'phenylpyruvate' '' M '13.1.6.4' 'amino acid metabolism.synthesis.aromatic aa.tyrosine' '' '' '13.1.6.4.1' 'amino acid metabolism.synthesis.aromatic aa.tyrosine.arogenate dehydrogenase \& prephenate dehydrogenase' 'nbv0.3scaffold24342_5108-8289' '(at1g15710 : 357.0) prephenate dehydrogenase family protein; FUNCTIONS IN: prephenate dehydrogenase (NADP+) activity; INVOLVED IN: tyrosine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydrogenase (InterPro:IPR003099), Arogenate/prephenate dehydrogenase (InterPro:IPR012070); BEST Arabidopsis thaliana protein match is: arogenate dehydrogenase (TAIR:AT5G34930.1); Has 919 Blast hits to 907 proteins in 395 species: Archae - 81; Bacteria - 505; Metazoa - 3; Fungi - 100; Plants - 115; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37591 : 326.0) no description available & (gnl|cdd|30635 : 108.0) no description available & (reliability: 686.0) & (original description: Putative Ardh, Description = Arogenate dehydrogenase, putative, PFAM = PF02153)' T '13.1.6.4.1' 'amino acid metabolism.synthesis.aromatic aa.tyrosine.arogenate dehydrogenase \& prephenate dehydrogenase' 'niben101scf10126_52949-56103' '(at1g15710 : 356.0) prephenate dehydrogenase family protein; FUNCTIONS IN: prephenate dehydrogenase (NADP+) activity; INVOLVED IN: tyrosine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydrogenase (InterPro:IPR003099), Arogenate/prephenate dehydrogenase (InterPro:IPR012070); BEST Arabidopsis thaliana protein match is: arogenate dehydrogenase (TAIR:AT5G34930.1); Has 919 Blast hits to 907 proteins in 395 species: Archae - 81; Bacteria - 505; Metazoa - 3; Fungi - 100; Plants - 115; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37591 : 327.0) no description available & (gnl|cdd|30635 : 108.0) no description available & (reliability: 686.0) & (original description: Putative Ardh, Description = Arogenate dehydrogenase, putative, PFAM = PF02153)' T '13.1.6.4.1' 'amino acid metabolism.synthesis.aromatic aa.tyrosine.arogenate dehydrogenase \& prephenate dehydrogenase' 'niben101scf10152_87742-91254' '(at5g34930 : 282.0) arogenate dehydrogenase; FUNCTIONS IN: binding, prephenate dehydrogenase (NADP+) activity, catalytic activity; INVOLVED IN: tyrosine biosynthetic process, metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydrogenase (InterPro:IPR003099), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: prephenate dehydrogenase family protein (TAIR:AT1G15710.1); Has 1942 Blast hits to 1528 proteins in 619 species: Archae - 162; Bacteria - 1128; Metazoa - 21; Fungi - 62; Plants - 205; Viruses - 0; Other Eukaryotes - 364 (source: NCBI BLink). & (gnl|cdd|37591 : 242.0) no description available & (gnl|cdd|30635 : 95.4) no description available & (reliability: 564.0) & (original description: Putative ADH3, Description = Arogenate dehydrogenase 3, PFAM = PF02153)' T '13.1.6.4.1' 'amino acid metabolism.synthesis.aromatic aa.tyrosine.arogenate dehydrogenase \& prephenate dehydrogenase' 'niben101scf15958_35723-38850' '(at1g15710 : 448.0) prephenate dehydrogenase family protein; FUNCTIONS IN: prephenate dehydrogenase (NADP+) activity; INVOLVED IN: tyrosine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydrogenase (InterPro:IPR003099), Arogenate/prephenate dehydrogenase (InterPro:IPR012070); BEST Arabidopsis thaliana protein match is: arogenate dehydrogenase (TAIR:AT5G34930.1); Has 919 Blast hits to 907 proteins in 395 species: Archae - 81; Bacteria - 505; Metazoa - 3; Fungi - 100; Plants - 115; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37591 : 387.0) no description available & (gnl|cdd|30635 : 116.0) no description available & (reliability: 816.0) & (original description: Putative agd1, Description = Arogenate dehydrogenase, PFAM = PF02153)' T '13.1.6.4.2' 'amino acid metabolism.synthesis.aromatic aa.tyrosine.prephenate dehydrogenase' 'nbv0.3scaffold24342_5108-8289' '(at1g15710 : 357.0) prephenate dehydrogenase family protein; FUNCTIONS IN: prephenate dehydrogenase (NADP+) activity; INVOLVED IN: tyrosine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydrogenase (InterPro:IPR003099), Arogenate/prephenate dehydrogenase (InterPro:IPR012070); BEST Arabidopsis thaliana protein match is: arogenate dehydrogenase (TAIR:AT5G34930.1); Has 919 Blast hits to 907 proteins in 395 species: Archae - 81; Bacteria - 505; Metazoa - 3; Fungi - 100; Plants - 115; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37591 : 326.0) no description available & (gnl|cdd|30635 : 108.0) no description available & (reliability: 714.0) & (original description: Putative Ardh, Description = Arogenate dehydrogenase, putative, PFAM = PF02153)' T '13.1.6.4.2' 'amino acid metabolism.synthesis.aromatic aa.tyrosine.prephenate dehydrogenase' 'niben101scf10126_52949-56103' '(at1g15710 : 356.0) prephenate dehydrogenase family protein; FUNCTIONS IN: prephenate dehydrogenase (NADP+) activity; INVOLVED IN: tyrosine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydrogenase (InterPro:IPR003099), Arogenate/prephenate dehydrogenase (InterPro:IPR012070); BEST Arabidopsis thaliana protein match is: arogenate dehydrogenase (TAIR:AT5G34930.1); Has 919 Blast hits to 907 proteins in 395 species: Archae - 81; Bacteria - 505; Metazoa - 3; Fungi - 100; Plants - 115; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37591 : 327.0) no description available & (gnl|cdd|30635 : 108.0) no description available & (reliability: 712.0) & (original description: Putative Ardh, Description = Arogenate dehydrogenase, putative, PFAM = PF02153)' T '13.1.6.4.2' 'amino acid metabolism.synthesis.aromatic aa.tyrosine.prephenate dehydrogenase' 'niben101scf15958_35723-38850' '(at1g15710 : 448.0) prephenate dehydrogenase family protein; FUNCTIONS IN: prephenate dehydrogenase (NADP+) activity; INVOLVED IN: tyrosine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydrogenase (InterPro:IPR003099), Arogenate/prephenate dehydrogenase (InterPro:IPR012070); BEST Arabidopsis thaliana protein match is: arogenate dehydrogenase (TAIR:AT5G34930.1); Has 919 Blast hits to 907 proteins in 395 species: Archae - 81; Bacteria - 505; Metazoa - 3; Fungi - 100; Plants - 115; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37591 : 387.0) no description available & (gnl|cdd|30635 : 116.0) no description available & (reliability: 896.0) & (original description: Putative agd1, Description = Arogenate dehydrogenase, PFAM = PF02153)' T '13.1.6.4.3' 'amino acid metabolism.synthesis.aromatic aa.tyrosine.tyrosine transaminase' 'nbv0.3scaffold94806_486-3915' '(gnl|cdd|35480 : 401.0) no description available & (at5g53970 : 348.0) encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment; Tyrosine transaminase family protein; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G36160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30785 : 153.0) no description available & (reliability: 650.0) & (original description: Putative tat, Description = Tyrosine aminotransferase, PFAM = PF00155)' T '13.1.6.4.1001' 'amino acid metabolism.synthesis.aromatic aa.tyrosine' 'tyrosine' 'amino acid synthesis.tyrosine; amino acid degradation.tyrosine; secondary metabolism; Co-factor metabolism' M '13.1.6.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan' 'nbv0.3scaffold30851_5429-10452' '(at4g11610 : 1306.0) C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein (TAIR:AT3G57880.1); Has 4911 Blast hits to 3458 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 2965; Fungi - 226; Plants - 1362; Viruses - 0; Other Eukaryotes - 358 (source: NCBI BLink). & (gnl|cdd|71804 : 297.0) no description available & (reliability: 2612.0) & (original description: Putative At4g11610, Description = C2 calcium/lipid-binding plant phosphoribosyltransferase family protein, PFAM = PF08372;PF00168;PF00168;PF00168;PF00168)' T '13.1.6.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan' 'niben044scf00033877ctg007_8117-13331' '(at5g48060 : 1407.0) C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT5G06850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|71804 : 300.0) no description available & (reliability: 2814.0) & (original description: Putative Os04g0472900, Description = Os04g0472900 protein, PFAM = PF08372;PF00168;PF00168;PF00168;PF00168)' T '13.1.6.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan' 'niben101scf01086_118058-123081' '(at4g11610 : 1297.0) C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein (TAIR:AT3G57880.1); Has 4911 Blast hits to 3458 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 2965; Fungi - 226; Plants - 1362; Viruses - 0; Other Eukaryotes - 358 (source: NCBI BLink). & (gnl|cdd|71804 : 297.0) no description available & (reliability: 2594.0) & (original description: Putative FTIP1, Description = FT-interacting protein 1, PFAM = PF08372;PF00168;PF00168;PF00168;PF00168)' T '13.1.6.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan' 'niben101scf03374_879691-884767' '(at4g11610 : 1514.0) C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein (TAIR:AT3G57880.1); Has 4911 Blast hits to 3458 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 2965; Fungi - 226; Plants - 1362; Viruses - 0; Other Eukaryotes - 358 (source: NCBI BLink). & (gnl|cdd|71804 : 301.0) no description available & (gnl|cdd|36246 : 84.0) no description available & (reliability: 3028.0) & (original description: Putative At4g11610, Description = C2 calcium/lipid-binding plant phosphoribosyltransferase family protein, PFAM = PF00168;PF00168;PF00168;PF00168;PF08372)' T '13.1.6.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan' 'niben101scf03494_399148-405618' '(at5g06850 : 1338.0) C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT5G48060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71804 : 296.0) no description available & (gnl|cdd|36246 : 93.3) no description available & (reliability: 2448.0) & (original description: Putative FTIP1, Description = FT-interacting protein 1, PFAM = PF08372;PF00168;PF00168;PF00168)' T '13.1.6.5.1' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate synthase' 'nbv0.3scaffold5090_13733-22695' '(at5g05730 : 772.0) ASA1 encodes the alpha subunit of anthranilate synthase, which catalyzes the rate-limiting step of tryptophan synthesis. ASA1 is induced by ethylene, and forms a link between ethylene signalling and auxin synthesis in roots.; anthranilate synthase alpha subunit 1 (ASA1); CONTAINS InterPro DOMAIN/s: Anthranilate synthase component I, N-terminal (InterPro:IPR006805), Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Anthranilate synthase component I (InterPro:IPR019999), Anthranilate synthase component I, PabB-like (InterPro:IPR005256); BEST Arabidopsis thaliana protein match is: anthranilate synthase 2 (TAIR:AT2G29690.1). & (gnl|cdd|36437 : 552.0) no description available & (gnl|cdd|30496 : 417.0) no description available & (reliability: 1544.0) & (original description: Putative ASA2, Description = Feedback-insensitive anthranilate synthase alpha-2 chain, PFAM = PF00425;PF04715)' T '13.1.6.5.1' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate synthase' 'nbv0.3scaffold72550_1-6633' '(at2g29690 : 822.0) Encode a functional anthranilate synthase protein. Expressed at a constitutive basal level. Expression was not induced by wounding nor bacterial pathogen infiltration. Involved in aromatic amino acid biosynthesis.; anthranilate synthase 2 (ASA2); FUNCTIONS IN: anthranilate synthase activity; INVOLVED IN: tryptophan biosynthetic process, aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast, anthranilate synthase complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Anthranilate synthase component I, N-terminal (InterPro:IPR006805), Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Anthranilate synthase component I (InterPro:IPR019999), Anthranilate synthase component I, PabB-like (InterPro:IPR005256); BEST Arabidopsis thaliana protein match is: anthranilate synthase alpha subunit 1 (TAIR:AT5G05730.1); Has 16475 Blast hits to 16472 proteins in 2614 species: Archae - 246; Bacteria - 11051; Metazoa - 5; Fungi - 314; Plants - 193; Viruses - 0; Other Eukaryotes - 4666 (source: NCBI BLink). & (gnl|cdd|36437 : 603.0) no description available & (gnl|cdd|30496 : 439.0) no description available & (reliability: 1644.0) & (original description: Putative asa, Description = Anthranilate synthase alpha subunit, PFAM = PF04715;PF00425)' T '13.1.6.5.1' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate synthase' 'nbv0.5scaffold7310_29618-47149' '(gnl|cdd|36438 : 717.0) no description available & (at2g28880 : 617.0) embryo defective 1997 (emb1997); FUNCTIONS IN: oxo-acid-lyase activity, catalytic activity, anthranilate synthase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), Anthranilate synthase, glutamine amidotransferase domain (InterPro:IPR006221), Carbamoyl phosphate synthase, GATase domain (InterPro:IPR001317), Anthranilate synthase component I, N-terminal (InterPro:IPR006805), Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Para-aminobenzoate synthase, component I (InterPro:IPR005802), Glutamine amidotransferase type 1 (InterPro:IPR017926), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); BEST Arabidopsis thaliana protein match is: anthranilate synthase 2 (TAIR:AT2G29690.1); Has 26955 Blast hits to 26481 proteins in 3128 species: Archae - 525; Bacteria - 17829; Metazoa - 510; Fungi - 766; Plants - 261; Viruses - 0; Other Eukaryotes - 7064 (source: NCBI BLink). & (gnl|cdd|30496 : 382.0) no description available & (reliability: 1234.0) & (original description: Putative pabB, Description = Para-aminobenzoate synthase, PFAM = PF00117;PF00117;PF04715;PF00425)' T '13.1.6.5.1' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate synthase' 'niben044scf00014915ctg001_1-5051' '(at2g29690 : 604.0) Encode a functional anthranilate synthase protein. Expressed at a constitutive basal level. Expression was not induced by wounding nor bacterial pathogen infiltration. Involved in aromatic amino acid biosynthesis.; anthranilate synthase 2 (ASA2); FUNCTIONS IN: anthranilate synthase activity; INVOLVED IN: tryptophan biosynthetic process, aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast, anthranilate synthase complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Anthranilate synthase component I, N-terminal (InterPro:IPR006805), Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Anthranilate synthase component I (InterPro:IPR019999), Anthranilate synthase component I, PabB-like (InterPro:IPR005256); BEST Arabidopsis thaliana protein match is: anthranilate synthase alpha subunit 1 (TAIR:AT5G05730.1); Has 16475 Blast hits to 16472 proteins in 2614 species: Archae - 246; Bacteria - 11051; Metazoa - 5; Fungi - 314; Plants - 193; Viruses - 0; Other Eukaryotes - 4666 (source: NCBI BLink). & (gnl|cdd|36437 : 454.0) no description available & (gnl|cdd|30496 : 385.0) no description available & (reliability: 1208.0) & (original description: Putative asa, Description = Anthranilate synthase component I, PFAM = PF00425;PF04715)' T '13.1.6.5.1' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate synthase' 'niben044scf00014915ctg002_1-2370' '(at5g05730 : 197.0) ASA1 encodes the alpha subunit of anthranilate synthase, which catalyzes the rate-limiting step of tryptophan synthesis. ASA1 is induced by ethylene, and forms a link between ethylene signalling and auxin synthesis in roots.; anthranilate synthase alpha subunit 1 (ASA1); CONTAINS InterPro DOMAIN/s: Anthranilate synthase component I, N-terminal (InterPro:IPR006805), Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Anthranilate synthase component I (InterPro:IPR019999), Anthranilate synthase component I, PabB-like (InterPro:IPR005256); BEST Arabidopsis thaliana protein match is: anthranilate synthase 2 (TAIR:AT2G29690.1). & (gnl|cdd|36437 : 117.0) no description available & (reliability: 394.0) & (original description: Putative asa, Description = Anthranilate synthase alpha 1, PFAM = PF04715)' T '13.1.6.5.1' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate synthase' 'niben044scf00017259ctg007_2596-5011' '(at2g28880 : 174.0) embryo defective 1997 (emb1997); FUNCTIONS IN: oxo-acid-lyase activity, catalytic activity, anthranilate synthase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), Anthranilate synthase, glutamine amidotransferase domain (InterPro:IPR006221), Carbamoyl phosphate synthase, GATase domain (InterPro:IPR001317), Anthranilate synthase component I, N-terminal (InterPro:IPR006805), Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Para-aminobenzoate synthase, component I (InterPro:IPR005802), Glutamine amidotransferase type 1 (InterPro:IPR017926), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); BEST Arabidopsis thaliana protein match is: anthranilate synthase 2 (TAIR:AT2G29690.1); Has 26955 Blast hits to 26481 proteins in 3128 species: Archae - 525; Bacteria - 17829; Metazoa - 510; Fungi - 766; Plants - 261; Viruses - 0; Other Eukaryotes - 7064 (source: NCBI BLink). & (gnl|cdd|36438 : 121.0) no description available & (reliability: 348.0) & (original description: Putative ADCS, Description = Para-aminobenzoate synthase, PFAM = PF00117)' T '13.1.6.5.1' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate synthase' 'niben101scf00406_27581-50599' '(at2g28880 : 1033.0) embryo defective 1997 (emb1997); FUNCTIONS IN: oxo-acid-lyase activity, catalytic activity, anthranilate synthase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), Anthranilate synthase, glutamine amidotransferase domain (InterPro:IPR006221), Carbamoyl phosphate synthase, GATase domain (InterPro:IPR001317), Anthranilate synthase component I, N-terminal (InterPro:IPR006805), Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Para-aminobenzoate synthase, component I (InterPro:IPR005802), Glutamine amidotransferase type 1 (InterPro:IPR017926), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); BEST Arabidopsis thaliana protein match is: anthranilate synthase 2 (TAIR:AT2G29690.1); Has 26955 Blast hits to 26481 proteins in 3128 species: Archae - 525; Bacteria - 17829; Metazoa - 510; Fungi - 766; Plants - 261; Viruses - 0; Other Eukaryotes - 7064 (source: NCBI BLink). & (gnl|cdd|36438 : 807.0) no description available & (gnl|cdd|30496 : 383.0) no description available & (reliability: 2066.0) & (original description: Putative ADCS, Description = Aminodeoxychorismate synthase, chloroplastic, PFAM = PF04715;PF00117;PF00117;PF00425)' T '13.1.6.5.1' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate synthase' 'niben101scf04044_57604-66615' '(at5g05730 : 796.0) ASA1 encodes the alpha subunit of anthranilate synthase, which catalyzes the rate-limiting step of tryptophan synthesis. ASA1 is induced by ethylene, and forms a link between ethylene signalling and auxin synthesis in roots.; anthranilate synthase alpha subunit 1 (ASA1); CONTAINS InterPro DOMAIN/s: Anthranilate synthase component I, N-terminal (InterPro:IPR006805), Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Anthranilate synthase component I (InterPro:IPR019999), Anthranilate synthase component I, PabB-like (InterPro:IPR005256); BEST Arabidopsis thaliana protein match is: anthranilate synthase 2 (TAIR:AT2G29690.1). & (gnl|cdd|36437 : 574.0) no description available & (gnl|cdd|30496 : 439.0) no description available & (reliability: 1592.0) & (original description: Putative ASA1, Description = Anthranilate synthase alpha subunit 1, chloroplastic, PFAM = PF00425;PF04715)' T '13.1.6.5.1' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate synthase' 'niben101scf05881_73427-85102' '(at2g29690 : 823.0) Encode a functional anthranilate synthase protein. Expressed at a constitutive basal level. Expression was not induced by wounding nor bacterial pathogen infiltration. Involved in aromatic amino acid biosynthesis.; anthranilate synthase 2 (ASA2); FUNCTIONS IN: anthranilate synthase activity; INVOLVED IN: tryptophan biosynthetic process, aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast, anthranilate synthase complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Anthranilate synthase component I, N-terminal (InterPro:IPR006805), Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Anthranilate synthase component I (InterPro:IPR019999), Anthranilate synthase component I, PabB-like (InterPro:IPR005256); BEST Arabidopsis thaliana protein match is: anthranilate synthase alpha subunit 1 (TAIR:AT5G05730.1); Has 16475 Blast hits to 16472 proteins in 2614 species: Archae - 246; Bacteria - 11051; Metazoa - 5; Fungi - 314; Plants - 193; Viruses - 0; Other Eukaryotes - 4666 (source: NCBI BLink). & (gnl|cdd|36437 : 605.0) no description available & (gnl|cdd|30496 : 440.0) no description available & (reliability: 1646.0) & (original description: Putative asa, Description = Anthranilate synthase alpha subunit, PFAM = PF00425;PF04715)' T '13.1.6.5.1' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate synthase' 'niben101scf06465_3891-24057' '(at2g28880 : 1070.0) embryo defective 1997 (emb1997); FUNCTIONS IN: oxo-acid-lyase activity, catalytic activity, anthranilate synthase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), Anthranilate synthase, glutamine amidotransferase domain (InterPro:IPR006221), Carbamoyl phosphate synthase, GATase domain (InterPro:IPR001317), Anthranilate synthase component I, N-terminal (InterPro:IPR006805), Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Para-aminobenzoate synthase, component I (InterPro:IPR005802), Glutamine amidotransferase type 1 (InterPro:IPR017926), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); BEST Arabidopsis thaliana protein match is: anthranilate synthase 2 (TAIR:AT2G29690.1); Has 26955 Blast hits to 26481 proteins in 3128 species: Archae - 525; Bacteria - 17829; Metazoa - 510; Fungi - 766; Plants - 261; Viruses - 0; Other Eukaryotes - 7064 (source: NCBI BLink). & (gnl|cdd|36438 : 815.0) no description available & (gnl|cdd|30496 : 385.0) no description available & (reliability: 2140.0) & (original description: Putative ADCS, Description = Aminodeoxychorismate synthase, chloroplastic, PFAM = PF00117;PF00117;PF00425;PF04715)' T '13.1.6.5.1' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate synthase' 'niben101scf10073_47793-55311' '(at1g25220 : 370.0) Catalyzes the first step of tryptophan biosynthesis: Chorismate L-Glutamine = Anthranilate Pyruvate L-Glutamate. Functions as a heterocomplex with anthranilate synthase alpha subunit (ASA1 or ASA2).; anthranilate synthase beta subunit 1 (ASB1); FUNCTIONS IN: anthranilate synthase activity; INVOLVED IN: tryptophan biosynthetic process, response to ethylene stimulus, response to bacterium, auxin biosynthetic process, lateral root primordium development; LOCATED IN: chloroplast; EXPRESSED IN: pericycle, cotyledon vascular system, primary root tip, lateral root primordium; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase superfamily (InterPro:IPR011702), Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Anthranilate synthase, glutamine amidotransferase domain (InterPro:IPR006221), Carbamoyl phosphate synthase, GATase domain (InterPro:IPR001317), Glutamine amidotransferase type 1 (InterPro:IPR017926), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); BEST Arabidopsis thaliana protein match is: Glutamine amidotransferase type 1 family protein (TAIR:AT5G57890.1). & (gnl|cdd|35249 : 323.0) no description available & (gnl|cdd|30858 : 256.0) no description available & (reliability: 740.0) & (original description: Putative ASB2, Description = Anthranilate synthase beta subunit 2, chloroplastic, PFAM = PF00117)' T '13.1.6.5.2' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate phosphoribosyltransferase' 'nbv0.5scaffold3113_137722-149415' '(gnl|cdd|80567 : 203.0) no description available & (at5g17990 : 199.0) Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate.; tryptophan biosynthesis 1 (TRP1); FUNCTIONS IN: anthranilate phosphoribosyltransferase activity; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 3, N-terminal (InterPro:IPR017459), Anthranilate phosphoribosyl transferase (InterPro:IPR005940), Glycosyl transferase, family 3 (InterPro:IPR000312); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36651 : 165.0) no description available & (reliability: 398.0) & (original description: Putative bf1, Description = Anthranilate phosphoribosyltransferase, PFAM = PF00591;PF02885)' T '13.1.6.5.2' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate phosphoribosyltransferase' 'nbv0.5scaffold4153_110097-114822' '(at5g17990 : 454.0) Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate.; tryptophan biosynthesis 1 (TRP1); FUNCTIONS IN: anthranilate phosphoribosyltransferase activity; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 3, N-terminal (InterPro:IPR017459), Anthranilate phosphoribosyl transferase (InterPro:IPR005940), Glycosyl transferase, family 3 (InterPro:IPR000312); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80567 : 367.0) no description available & (gnl|cdd|36651 : 352.0) no description available & (reliability: 908.0) & (original description: Putative tRPD, Description = Anthranilate phosphoribosyltransferase, PFAM = PF02885;PF00591;PF00591)' T '13.1.6.5.2' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate phosphoribosyltransferase' 'niben044scf00014706ctg006_1104-5524' '(at5g17990 : 499.0) Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate.; tryptophan biosynthesis 1 (TRP1); FUNCTIONS IN: anthranilate phosphoribosyltransferase activity; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 3, N-terminal (InterPro:IPR017459), Anthranilate phosphoribosyl transferase (InterPro:IPR005940), Glycosyl transferase, family 3 (InterPro:IPR000312); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80567 : 394.0) no description available & (gnl|cdd|36651 : 384.0) no description available & (reliability: 998.0) & (original description: Putative tRPD, Description = Anthranilate phosphoribosyltransferase, PFAM = PF02885;PF00591)' T '13.1.6.5.2' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate phosphoribosyltransferase' 'niben101scf02207_490904-504500' '(at5g17990 : 455.0) Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate.; tryptophan biosynthesis 1 (TRP1); FUNCTIONS IN: anthranilate phosphoribosyltransferase activity; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 3, N-terminal (InterPro:IPR017459), Anthranilate phosphoribosyl transferase (InterPro:IPR005940), Glycosyl transferase, family 3 (InterPro:IPR000312); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80567 : 379.0) no description available & (gnl|cdd|36651 : 369.0) no description available & (reliability: 910.0) & (original description: Putative trpD, Description = Anthranilate phosphoribosyltransferase, PFAM = PF00591;PF02885)' T '13.1.6.5.2' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate phosphoribosyltransferase' 'niben101scf03045_966822-979368' '(at1g70570 : 835.0) anthranilate phosphoribosyltransferase, putative; FUNCTIONS IN: anthranilate phosphoribosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: tryptophan biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 3, N-terminal (InterPro:IPR017459), Glycosyl transferase, family 3 (InterPro:IPR000312). & (gnl|cdd|30893 : 122.0) no description available & (reliability: 1670.0) & (original description: Putative BnaA02g15010D, Description = BnaA02g15010D protein, PFAM = )' T '13.1.6.5.2' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate phosphoribosyltransferase' 'niben101scf04638_44735-50965' '(at5g17990 : 461.0) Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate.; tryptophan biosynthesis 1 (TRP1); FUNCTIONS IN: anthranilate phosphoribosyltransferase activity; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 3, N-terminal (InterPro:IPR017459), Anthranilate phosphoribosyl transferase (InterPro:IPR005940), Glycosyl transferase, family 3 (InterPro:IPR000312); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80567 : 377.0) no description available & (gnl|cdd|36651 : 372.0) no description available & (reliability: 922.0) & (original description: Putative tRPD, Description = Anthranilate phosphoribosyltransferase, PFAM = PF00591;PF02885)' T '13.1.6.5.3' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.phosphoribosyanthranilate isomerase' 'niben101scf02764_584478-589072' '(at1g07780 : 295.0) Encodes phosphoribosylanthranilate isomerase which catalyzes the third step of the tryptophan biosynthetic pathway. Member of gene family.; phosphoribosylanthranilate isomerase 1 (PAI1); CONTAINS InterPro DOMAIN/s: N-(5'phosphoribosyl)anthranilate isomerase (PRAI) (InterPro:IPR001240), Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: phosphoribosylanthranilate isomerase 2 (TAIR:AT5G05590.1). & (gnl|cdd|39403 : 204.0) no description available & (gnl|cdd|73365 : 190.0) no description available & (reliability: 590.0) & (original description: Putative PAI1, Description = N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic, PFAM = PF00697)' T '13.1.6.5.3' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.phosphoribosyanthranilate isomerase' 'niben101scf04909_26343-33682' '(at1g07780 : 295.0) Encodes phosphoribosylanthranilate isomerase which catalyzes the third step of the tryptophan biosynthetic pathway. Member of gene family.; phosphoribosylanthranilate isomerase 1 (PAI1); CONTAINS InterPro DOMAIN/s: N-(5'phosphoribosyl)anthranilate isomerase (PRAI) (InterPro:IPR001240), Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: phosphoribosylanthranilate isomerase 2 (TAIR:AT5G05590.1). & (gnl|cdd|39403 : 199.0) no description available & (gnl|cdd|73365 : 183.0) no description available & (reliability: 590.0) & (original description: Putative PAI1, Description = N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic, PFAM = PF00697)' T '13.1.6.5.4' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.indole-3-glycerol phosphate synthase' 'niben101scf01948_29124-43350' '(at5g48220 : 455.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: indole-3-glycerol-phosphate synthase activity, catalytic activity; INVOLVED IN: metabolic process, tryptophan metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Indole-3-glycerol phosphate synthase, conserved site (InterPro:IPR001468), Ribulose-phosphate binding barrel (InterPro:IPR011060), Indole-3-glycerol phosphate synthase (InterPro:IPR013798); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT2G04400.1). & (gnl|cdd|39402 : 377.0) no description available & (gnl|cdd|80602 : 320.0) no description available & (reliability: 910.0) & (original description: Putative IGPS, Description = Indole-3-glycerol phosphate synthase, chloroplastic, PFAM = PF00218)' T '13.1.6.5.4' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.indole-3-glycerol phosphate synthase' 'niben101scf04653_293416-304269' '(at5g48220 : 475.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: indole-3-glycerol-phosphate synthase activity, catalytic activity; INVOLVED IN: metabolic process, tryptophan metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Indole-3-glycerol phosphate synthase, conserved site (InterPro:IPR001468), Ribulose-phosphate binding barrel (InterPro:IPR011060), Indole-3-glycerol phosphate synthase (InterPro:IPR013798); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT2G04400.1). & (gnl|cdd|39402 : 367.0) no description available & (gnl|cdd|80602 : 320.0) no description available & (reliability: 950.0) & (original description: Putative trpC, Description = Indole-3-glycerol phosphate synthase, PFAM = PF00218)' T '13.1.6.5.4' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.indole-3-glycerol phosphate synthase' 'niben101scf05437_594883-607929' '(at5g48220 : 457.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: indole-3-glycerol-phosphate synthase activity, catalytic activity; INVOLVED IN: metabolic process, tryptophan metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Indole-3-glycerol phosphate synthase, conserved site (InterPro:IPR001468), Ribulose-phosphate binding barrel (InterPro:IPR011060), Indole-3-glycerol phosphate synthase (InterPro:IPR013798); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT2G04400.1). & (gnl|cdd|39402 : 380.0) no description available & (gnl|cdd|80602 : 325.0) no description available & (reliability: 914.0) & (original description: Putative IGPS, Description = Indole-3-glycerol phosphate synthase, chloroplastic, PFAM = PF00218)' T '13.1.6.5.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase' 'nbv0.3scaffold33390_1-5692' '(at5g54810 : 756.0) A.thaliana tryptophan synthase beta subunit (trpB); tryptophan synthase beta-subunit 1 (TSB1); FUNCTIONS IN: tryptophan synthase activity; INVOLVED IN: response to oxidative stress, tryptophan biosynthetic process, response to salt stress, indoleacetic acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: guard cell, root; CONTAINS InterPro DOMAIN/s: Tryptophan synthase, beta chain (InterPro:IPR006654), Tryptophan synthase, beta chain, conserved site (InterPro:IPR006653), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 2 (TAIR:AT4G27070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81368 : 746.0) no description available & (p43284|trpb2_maize : 736.0) Tryptophan synthase beta chain 2, chloroplast precursor (EC 4.2.1.20) (Orange pericarp 2) (Fragment) - Zea mays (Maize) & (gnl|cdd|36609 : 634.0) no description available & (reliability: 1512.0) & (original description: Putative TSB, Description = Tryptophan synthase beta chain 2, chloroplastic, PFAM = PF00291)' T '13.1.6.5.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase' 'nbv0.3scaffold55804_1332-10805' '(at3g54640 : 324.0) Catalyzes the conversion of indole-3-glycerolphosphate to indole, the penultimate reaction in the biosynthesis of tryptophan. Functions as a heterocomplex with tryptophan synthase beta subunit (TSA2).; tryptophan synthase alpha chain (TSA1); FUNCTIONS IN: tryptophan synthase activity; INVOLVED IN: tryptophan biosynthetic process, defense response to bacterium, defense response by callose deposition in cell wall; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tryptophan synthase, alpha chain, active site (InterPro:IPR018204), Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060), Tryptophan synthase, alpha chain (InterPro:IPR002028); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT4G02610.1); Has 7625 Blast hits to 7625 proteins in 2261 species: Archae - 218; Bacteria - 4541; Metazoa - 6; Fungi - 175; Plants - 137; Viruses - 0; Other Eukaryotes - 2548 (source: NCBI BLink). & (gnl|cdd|39377 : 272.0) no description available & (gnl|cdd|29424 : 264.0) no description available & (p42390|trpa_maize : 241.0) Indole-3-glycerol phosphate lyase, chloroplast precursor (EC 4.1.2.8) (Indole synthase) (Tryptophan synthase alpha chain) (EC 4.2.1.20) (Benzoxazineless 1) - Zea mays (Maize) & (reliability: 648.0) & (original description: Putative TRPA1, Description = Tryptophan synthase alpha chain, PFAM = PF00290;PF00290)' T '13.1.6.5.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase' 'nbv0.5scaffold80_695419-700063' '(at5g28237 : 271.0) Pyridoxal-5'-phosphate-dependent enzyme family protein; FUNCTIONS IN: pyridoxal phosphate binding, tryptophan synthase activity, catalytic activity; INVOLVED IN: tryptophan biosynthetic process, metabolic process, tryptophan metabolic process; CONTAINS InterPro DOMAIN/s: Tryptophan synthase, beta chain (InterPro:IPR006654), Tryptophan synthase, beta chain, conserved site (InterPro:IPR006653), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 2 (TAIR:AT4G27070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81368 : 260.0) no description available & (p43284|trpb2_maize : 229.0) Tryptophan synthase beta chain 2, chloroplast precursor (EC 4.2.1.20) (Orange pericarp 2) (Fragment) - Zea mays (Maize) & (gnl|cdd|36609 : 213.0) no description available & (reliability: 542.0) & (original description: Putative orp1, Description = Tryptophan synthase beta chain, PFAM = PF00291)' T '13.1.6.5.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase' 'nbv0.5scaffold1194_418918-453706' '(at4g02610 : 307.0) Aldolase-type TIM barrel family protein; CONTAINS InterPro DOMAIN/s: Tryptophan synthase, alpha chain, active site (InterPro:IPR018204), Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060), Tryptophan synthase, alpha chain (InterPro:IPR002028); BEST Arabidopsis thaliana protein match is: tryptophan synthase alpha chain (TAIR:AT3G54640.1); Has 7706 Blast hits to 7706 proteins in 2293 species: Archae - 225; Bacteria - 4607; Metazoa - 6; Fungi - 175; Plants - 137; Viruses - 0; Other Eukaryotes - 2556 (source: NCBI BLink). & (gnl|cdd|29424 : 283.0) no description available & (gnl|cdd|39377 : 277.0) no description available & (p42390|trpa_maize : 228.0) Indole-3-glycerol phosphate lyase, chloroplast precursor (EC 4.1.2.8) (Indole synthase) (Tryptophan synthase alpha chain) (EC 4.2.1.20) (Benzoxazineless 1) - Zea mays (Maize) & (reliability: 614.0) & (original description: Putative trpA, Description = Tryptophan synthase alpha chain, PFAM = PF00290)' T '13.1.6.5.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase' 'niben044scf00008950ctg006_1230-9587' '(at3g54640 : 301.0) Catalyzes the conversion of indole-3-glycerolphosphate to indole, the penultimate reaction in the biosynthesis of tryptophan. Functions as a heterocomplex with tryptophan synthase beta subunit (TSA2).; tryptophan synthase alpha chain (TSA1); FUNCTIONS IN: tryptophan synthase activity; INVOLVED IN: tryptophan biosynthetic process, defense response to bacterium, defense response by callose deposition in cell wall; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tryptophan synthase, alpha chain, active site (InterPro:IPR018204), Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060), Tryptophan synthase, alpha chain (InterPro:IPR002028); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT4G02610.1); Has 7625 Blast hits to 7625 proteins in 2261 species: Archae - 218; Bacteria - 4541; Metazoa - 6; Fungi - 175; Plants - 137; Viruses - 0; Other Eukaryotes - 2548 (source: NCBI BLink). & (gnl|cdd|39377 : 262.0) no description available & (gnl|cdd|29424 : 252.0) no description available & (p42390|trpa_maize : 204.0) Indole-3-glycerol phosphate lyase, chloroplast precursor (EC 4.1.2.8) (Indole synthase) (Tryptophan synthase alpha chain) (EC 4.2.1.20) (Benzoxazineless 1) - Zea mays (Maize) & (reliability: 602.0) & (original description: Putative MpTSA, Description = Tryptophan synthase alpha subunit, PFAM = PF00290)' T '13.1.6.5.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase' 'niben101scf00157_426540-433378' '(at5g54810 : 756.0) A.thaliana tryptophan synthase beta subunit (trpB); tryptophan synthase beta-subunit 1 (TSB1); FUNCTIONS IN: tryptophan synthase activity; INVOLVED IN: response to oxidative stress, tryptophan biosynthetic process, response to salt stress, indoleacetic acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: guard cell, root; CONTAINS InterPro DOMAIN/s: Tryptophan synthase, beta chain (InterPro:IPR006654), Tryptophan synthase, beta chain, conserved site (InterPro:IPR006653), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 2 (TAIR:AT4G27070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81368 : 739.0) no description available & (p43284|trpb2_maize : 733.0) Tryptophan synthase beta chain 2, chloroplast precursor (EC 4.2.1.20) (Orange pericarp 2) (Fragment) - Zea mays (Maize) & (gnl|cdd|36609 : 634.0) no description available & (reliability: 1512.0) & (original description: Putative trpB, Description = Tryptophan synthase beta chain, PFAM = PF00291)' T '13.1.6.5.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase' 'niben101scf02541_315948-322068' '(at5g28237 : 577.0) Pyridoxal-5'-phosphate-dependent enzyme family protein; FUNCTIONS IN: pyridoxal phosphate binding, tryptophan synthase activity, catalytic activity; INVOLVED IN: tryptophan biosynthetic process, metabolic process, tryptophan metabolic process; CONTAINS InterPro DOMAIN/s: Tryptophan synthase, beta chain (InterPro:IPR006654), Tryptophan synthase, beta chain, conserved site (InterPro:IPR006653), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 2 (TAIR:AT4G27070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81368 : 572.0) no description available & (p43284|trpb2_maize : 526.0) Tryptophan synthase beta chain 2, chloroplast precursor (EC 4.2.1.20) (Orange pericarp 2) (Fragment) - Zea mays (Maize) & (gnl|cdd|36609 : 481.0) no description available & (reliability: 1154.0) & (original description: Putative TSB, Description = Tryptophan synthase beta chain 2, chloroplastic, PFAM = PF00291)' T '13.1.6.5.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase' 'niben101scf06987_144766-148693' '(at5g38530 : 781.0) tryptophan synthase beta type 2 (TSBtype2); FUNCTIONS IN: pyridoxal phosphate binding, tryptophan synthase activity, catalytic activity; INVOLVED IN: tryptophan biosynthetic process, metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Tryptophan synthase, beta chain-like (InterPro:IPR006316); BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 2 (TAIR:AT4G27070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84120 : 742.0) no description available & (gnl|cdd|36609 : 548.0) no description available & (p43283|trpb1_maize : 119.0) Tryptophan synthase beta chain 1 (EC 4.2.1.20) (Orange pericarp 1) (Fragment) - Zea mays (Maize) & (reliability: 1562.0) & (original description: Putative trpB, Description = Tryptophan synthase beta chain, PFAM = PF00291)' T '13.1.6.5.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase' 'niben101scf07980_10449-19922' '(at3g54640 : 332.0) Catalyzes the conversion of indole-3-glycerolphosphate to indole, the penultimate reaction in the biosynthesis of tryptophan. Functions as a heterocomplex with tryptophan synthase beta subunit (TSA2).; tryptophan synthase alpha chain (TSA1); FUNCTIONS IN: tryptophan synthase activity; INVOLVED IN: tryptophan biosynthetic process, defense response to bacterium, defense response by callose deposition in cell wall; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tryptophan synthase, alpha chain, active site (InterPro:IPR018204), Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060), Tryptophan synthase, alpha chain (InterPro:IPR002028); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT4G02610.1); Has 7625 Blast hits to 7625 proteins in 2261 species: Archae - 218; Bacteria - 4541; Metazoa - 6; Fungi - 175; Plants - 137; Viruses - 0; Other Eukaryotes - 2548 (source: NCBI BLink). & (gnl|cdd|39377 : 278.0) no description available & (gnl|cdd|29424 : 268.0) no description available & (p42390|trpa_maize : 249.0) Indole-3-glycerol phosphate lyase, chloroplast precursor (EC 4.1.2.8) (Indole synthase) (Tryptophan synthase alpha chain) (EC 4.2.1.20) (Benzoxazineless 1) - Zea mays (Maize) & (reliability: 664.0) & (original description: Putative TRPA1, Description = Tryptophan synthase alpha chain, PFAM = PF00290;PF00290)' T '13.1.6.5.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase' 'niben101scf11724_495533-502983' '(at4g27070 : 741.0) Tryptophan synthase beta. Expressed at low levels in all tissues.; tryptophan synthase beta-subunit 2 (TSB2); CONTAINS InterPro DOMAIN/s: Tryptophan synthase, beta chain (InterPro:IPR006654), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Tryptophan synthase, beta chain, conserved site (InterPro:IPR006653); BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 1 (TAIR:AT5G54810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81368 : 718.0) no description available & (p43284|trpb2_maize : 712.0) Tryptophan synthase beta chain 2, chloroplast precursor (EC 4.2.1.20) (Orange pericarp 2) (Fragment) - Zea mays (Maize) & (gnl|cdd|36609 : 623.0) no description available & (reliability: 1482.0) & (original description: Putative TSB, Description = Tryptophan synthase beta chain 2, chloroplastic, PFAM = PF00291)' T '13.1.6.5.1001' 'amino acid metabolism.synthesis.aromatic aa.tryptophan' 'tryptophan' 'amino acid synthesis.tryptophan; amino acid degradation.tryptophan; hormone metabolism.auxin' M '13.1.6.99' 'amino acid metabolism.synthesis.aromatic aa.misc' '' '' '13.1.7' 'amino acid metabolism.synthesis.histidine' '' '' '13.1.7.1' 'amino acid metabolism.synthesis.histidine.ATP phosphoribosyl transferase' 'niben044scf00033173ctg000_16253-24012' '(at1g09795 : 587.0) ATP phosphoribosyl transferase, catalyses first step of histidine biosynthesis; ATP phosphoribosyl transferase 2 (ATP-PRT2); FUNCTIONS IN: ATP phosphoribosyltransferase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histidine biosynthesis HisG: ATP phosphoribosyltransferase (InterPro:IPR001348), ATP phosphoribosyltransferase, conserved site (InterPro:IPR018198), ATP phosphoribosyltransferase, catalytic domain (InterPro:IPR013820), Histidine biosynthesis HisG, C-terminal (InterPro:IPR013115), Nitrogen regulatory PII-like, alpha/beta (InterPro:IPR011322); BEST Arabidopsis thaliana protein match is: ATP phosphoribosyl transferase 1 (TAIR:AT1G58080.1); Has 6354 Blast hits to 6354 proteins in 2167 species: Archae - 206; Bacteria - 4075; Metazoa - 2; Fungi - 141; Plants - 71; Viruses - 0; Other Eukaryotes - 1859 (source: NCBI BLink). & (gnl|cdd|38042 : 349.0) no description available & (gnl|cdd|80689 : 193.0) no description available & (reliability: 1174.0) & (original description: Putative HISN1B, Description = ATP phosphoribosyltransferase 2, chloroplastic, PFAM = PF08029;PF01634)' T '13.1.7.1' 'amino acid metabolism.synthesis.histidine.ATP phosphoribosyl transferase' 'niben101scf03053_82744-89651' '(at1g09795 : 591.0) ATP phosphoribosyl transferase, catalyses first step of histidine biosynthesis; ATP phosphoribosyl transferase 2 (ATP-PRT2); FUNCTIONS IN: ATP phosphoribosyltransferase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histidine biosynthesis HisG: ATP phosphoribosyltransferase (InterPro:IPR001348), ATP phosphoribosyltransferase, conserved site (InterPro:IPR018198), ATP phosphoribosyltransferase, catalytic domain (InterPro:IPR013820), Histidine biosynthesis HisG, C-terminal (InterPro:IPR013115), Nitrogen regulatory PII-like, alpha/beta (InterPro:IPR011322); BEST Arabidopsis thaliana protein match is: ATP phosphoribosyl transferase 1 (TAIR:AT1G58080.1); Has 6354 Blast hits to 6354 proteins in 2167 species: Archae - 206; Bacteria - 4075; Metazoa - 2; Fungi - 141; Plants - 71; Viruses - 0; Other Eukaryotes - 1859 (source: NCBI BLink). & (gnl|cdd|38042 : 349.0) no description available & (gnl|cdd|80689 : 192.0) no description available & (reliability: 1182.0) & (original description: Putative HISN1B, Description = ATP phosphoribosyltransferase 2, chloroplastic, PFAM = PF01634;PF08029)' T '13.1.7.2' 'amino acid metabolism.synthesis.histidine.bifunctional phosphoribosyl-ATP diphosphatase and phosphoribosyl-AMP cyclohydrolase' 'niben101scf00449_228477-232594' '(at1g31860 : 363.0) encodes a bifunctional protein that has phosphoribosyl-ATP pyrophosphohydrolase (PRA-PH) and phosphoribosyl-AMP cyclohydrolase (PRA-CH) activities.; AT-IE; FUNCTIONS IN: phosphoribosyl-AMP cyclohydrolase activity, phosphoribosyl-ATP diphosphatase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyl-AMP cyclohydrolase (InterPro:IPR002496), Phosphoribosyl-ATP pyrophosphohydrolase (InterPro:IPR008179), Phosphoribosyl-ATP pyrophosphohydrolase-like (InterPro:IPR021130); Has 8084 Blast hits to 8082 proteins in 2164 species: Archae - 247; Bacteria - 4946; Metazoa - 2; Fungi - 173; Plants - 52; Viruses - 0; Other Eukaryotes - 2664 (source: NCBI BLink). & (gnl|cdd|39512 : 246.0) no description available & (gnl|cdd|81034 : 164.0) no description available & (reliability: 726.0) & (original description: Putative HISN2, Description = Histidine biosynthesis bifunctional protein hisIE, chloroplastic, PFAM = PF01502;PF01503)' T '13.1.7.2' 'amino acid metabolism.synthesis.histidine.bifunctional phosphoribosyl-ATP diphosphatase and phosphoribosyl-AMP cyclohydrolase' 'niben101scf09016_18437-22212' '(at1g31860 : 366.0) encodes a bifunctional protein that has phosphoribosyl-ATP pyrophosphohydrolase (PRA-PH) and phosphoribosyl-AMP cyclohydrolase (PRA-CH) activities.; AT-IE; FUNCTIONS IN: phosphoribosyl-AMP cyclohydrolase activity, phosphoribosyl-ATP diphosphatase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyl-AMP cyclohydrolase (InterPro:IPR002496), Phosphoribosyl-ATP pyrophosphohydrolase (InterPro:IPR008179), Phosphoribosyl-ATP pyrophosphohydrolase-like (InterPro:IPR021130); Has 8084 Blast hits to 8082 proteins in 2164 species: Archae - 247; Bacteria - 4946; Metazoa - 2; Fungi - 173; Plants - 52; Viruses - 0; Other Eukaryotes - 2664 (source: NCBI BLink). & (gnl|cdd|39512 : 246.0) no description available & (gnl|cdd|81034 : 165.0) no description available & (reliability: 732.0) & (original description: Putative HISN2, Description = Histidine biosynthesis bifunctional protein hisIE, chloroplastic, PFAM = PF01502;PF01503)' T '13.1.7.3' 'amino acid metabolism.synthesis.histidine.phosphoribosyl-AMP cyclohydrolase' 'nbv0.5scaffold55_924344-976783' '(at2g36230 : 189.0) Encodes a BBMII isomerase involved in histidine biosynthesis.; ALBINO AND PALE GREEN 10 (APG10); FUNCTIONS IN: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060), Histidine biosynthesis (InterPro:IPR006062), Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic (InterPro:IPR011858); Has 5178 Blast hits to 5176 proteins in 1344 species: Archae - 226; Bacteria - 3159; Metazoa - 0; Fungi - 140; Plants - 59; Viruses - 0; Other Eukaryotes - 1594 (source: NCBI BLink). & (gnl|cdd|38265 : 169.0) no description available & (gnl|cdd|73385 : 87.6) no description available & (reliability: 378.0) & (original description: Putative hisA, Description = Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, PFAM = PF00977)' T '13.1.7.3' 'amino acid metabolism.synthesis.histidine.phosphoribosyl-AMP cyclohydrolase' 'nbv0.5scaffold6152_38354-46431' '(at2g36230 : 429.0) Encodes a BBMII isomerase involved in histidine biosynthesis.; ALBINO AND PALE GREEN 10 (APG10); FUNCTIONS IN: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060), Histidine biosynthesis (InterPro:IPR006062), Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic (InterPro:IPR011858); Has 5178 Blast hits to 5176 proteins in 1344 species: Archae - 226; Bacteria - 3159; Metazoa - 0; Fungi - 140; Plants - 59; Viruses - 0; Other Eukaryotes - 1594 (source: NCBI BLink). & (gnl|cdd|38265 : 380.0) no description available & (gnl|cdd|73385 : 181.0) no description available & (reliability: 858.0) & (original description: Putative HISN3, Description = 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic, PFAM = PF00977)' T '13.1.7.3' 'amino acid metabolism.synthesis.histidine.phosphoribosyl-AMP cyclohydrolase' 'niben101scf04954_566880-623268' '(at2g36230 : 243.0) Encodes a BBMII isomerase involved in histidine biosynthesis.; ALBINO AND PALE GREEN 10 (APG10); FUNCTIONS IN: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060), Histidine biosynthesis (InterPro:IPR006062), Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic (InterPro:IPR011858); Has 5178 Blast hits to 5176 proteins in 1344 species: Archae - 226; Bacteria - 3159; Metazoa - 0; Fungi - 140; Plants - 59; Viruses - 0; Other Eukaryotes - 1594 (source: NCBI BLink). & (gnl|cdd|38265 : 218.0) no description available & (gnl|cdd|73385 : 101.0) no description available & (reliability: 486.0) & (original description: Putative hisA, Description = Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, PFAM = PF00977)' T '13.1.7.4' 'amino acid metabolism.synthesis.histidine.N'-5'-phosphoribosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide isomerase' 'niben044scf00014187ctg006_402-8230' '(at4g26900 : 832.0) encodes a glutamine amidotransferase and cyclase, catalyzes the fifth and sixth steps of the histidine biosynthetic pathway; HIS HF (AT-HF); FUNCTIONS IN: imidazoleglycerol-phosphate synthase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Imidazole glycerol phosphate synthase, subunit H (InterPro:IPR010139), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Ribulose-phosphate binding barrel (InterPro:IPR011060), Histidine biosynthesis, HisF (InterPro:IPR004651), Glutamine amidotransferase type 1 (InterPro:IPR017926), Histidine biosynthesis (InterPro:IPR006062), Imidazole glycerol phosphate synthase HisHF (InterPro:IPR014640); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35842 : 727.0) no description available & (gnl|cdd|28860 : 285.0) no description available & (reliability: 1664.0) & (original description: Putative his4, Description = Imidazole glycerol phosphate synthase hisHF, PFAM = PF00977;PF00117)' T '13.1.7.4' 'amino acid metabolism.synthesis.histidine.N'-5'-phosphoribosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide isomerase' 'niben101scf00023_909237-921737' '(at4g26900 : 931.0) encodes a glutamine amidotransferase and cyclase, catalyzes the fifth and sixth steps of the histidine biosynthetic pathway; HIS HF (AT-HF); FUNCTIONS IN: imidazoleglycerol-phosphate synthase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Imidazole glycerol phosphate synthase, subunit H (InterPro:IPR010139), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Ribulose-phosphate binding barrel (InterPro:IPR011060), Histidine biosynthesis, HisF (InterPro:IPR004651), Glutamine amidotransferase type 1 (InterPro:IPR017926), Histidine biosynthesis (InterPro:IPR006062), Imidazole glycerol phosphate synthase HisHF (InterPro:IPR014640); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35842 : 830.0) no description available & (gnl|cdd|30456 : 290.0) no description available & (reliability: 1862.0) & (original description: Putative HISN4, Description = Imidazole glycerol phosphate synthase hisHF, chloroplastic, PFAM = PF00117;PF00977)' T '13.1.7.5' 'amino acid metabolism.synthesis.histidine.Imidazole glycerol phosphate synthase' '' '' '13.1.7.6' 'amino acid metabolism.synthesis.histidine.imidazoleglycerol-phosphate dehydratase' 'niben101scf00058_948748-955419' '(at4g14910 : 357.0) Encodes a protein that is predicted to act as a imidazoleglycerol-phosphate dehydratase involved in histidine biosynthesis; HISTIDINE BIOSYNTHESIS 5B (HISN5B); FUNCTIONS IN: imidazoleglycerol-phosphate dehydratase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Imidazoleglycerol-phosphate dehydratase, conserved site (InterPro:IPR020565), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Imidazoleglycerol-phosphate dehydratase (InterPro:IPR000807); BEST Arabidopsis thaliana protein match is: imidazoleglycerol-phosphate dehydratase (TAIR:AT3G22425.2). & (q43072|his7_pea : 352.0) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) (IGPD) - Pisum sativum (Garden pea) & (gnl|cdd|80789 : 310.0) no description available & (gnl|cdd|38353 : 294.0) no description available & (reliability: 714.0) & (original description: Putative HIS3, Description = Imidazoleglycerol-phosphate dehydratase, PFAM = PF00475)' T '13.1.7.7' 'amino acid metabolism.synthesis.histidine.histidinol-phosphate aminotransferase' 'nbv0.3scaffold43506_1-8328' '(o82030|his8_tobac : 729.0) Histidinol-phosphate aminotransferase, chloroplast precursor (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase) - Nicotiana tabacum (Common tobacco) & (at5g10330 : 561.0) Encodes histidinol-phosphate aminotransferase that catalyzes the eighth step in histidine biosynthesis. Loss of function mutations are embryo lethal.; histidinol phosphate aminotransferase 1 (HPA1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Histidinol-phosphate aminotransferase (InterPro:IPR005861), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: HISTIDINE BIOSYNTHESIS 6B (TAIR:AT1G71920.2); Has 35141 Blast hits to 35141 proteins in 2910 species: Archae - 1034; Bacteria - 25652; Metazoa - 263; Fungi - 377; Plants - 462; Viruses - 0; Other Eukaryotes - 7353 (source: NCBI BLink). & (gnl|cdd|35852 : 411.0) no description available & (gnl|cdd|30428 : 264.0) no description available & (reliability: 1122.0) & (original description: Putative HPA, Description = Histidinol-phosphate aminotransferase, chloroplastic, PFAM = PF00155;PF00155)' T '13.1.7.7' 'amino acid metabolism.synthesis.histidine.histidinol-phosphate aminotransferase' 'niben101scf01107_16533-29183' '(o82030|his8_tobac : 752.0) Histidinol-phosphate aminotransferase, chloroplast precursor (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase) - Nicotiana tabacum (Common tobacco) & (at5g10330 : 588.0) Encodes histidinol-phosphate aminotransferase that catalyzes the eighth step in histidine biosynthesis. Loss of function mutations are embryo lethal.; histidinol phosphate aminotransferase 1 (HPA1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Histidinol-phosphate aminotransferase (InterPro:IPR005861), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: HISTIDINE BIOSYNTHESIS 6B (TAIR:AT1G71920.2); Has 35141 Blast hits to 35141 proteins in 2910 species: Archae - 1034; Bacteria - 25652; Metazoa - 263; Fungi - 377; Plants - 462; Viruses - 0; Other Eukaryotes - 7353 (source: NCBI BLink). & (gnl|cdd|35852 : 456.0) no description available & (gnl|cdd|30428 : 297.0) no description available & (reliability: 1176.0) & (original description: Putative HPA, Description = Histidinol-phosphate aminotransferase, chloroplastic, PFAM = PF00155)' T '13.1.7.7' 'amino acid metabolism.synthesis.histidine.histidinol-phosphate aminotransferase' 'niben101scf03861_327644-336290' '(o82030|his8_tobac : 782.0) Histidinol-phosphate aminotransferase, chloroplast precursor (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase) - Nicotiana tabacum (Common tobacco) & (at5g10330 : 612.0) Encodes histidinol-phosphate aminotransferase that catalyzes the eighth step in histidine biosynthesis. Loss of function mutations are embryo lethal.; histidinol phosphate aminotransferase 1 (HPA1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Histidinol-phosphate aminotransferase (InterPro:IPR005861), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: HISTIDINE BIOSYNTHESIS 6B (TAIR:AT1G71920.2); Has 35141 Blast hits to 35141 proteins in 2910 species: Archae - 1034; Bacteria - 25652; Metazoa - 263; Fungi - 377; Plants - 462; Viruses - 0; Other Eukaryotes - 7353 (source: NCBI BLink). & (gnl|cdd|35852 : 456.0) no description available & (gnl|cdd|30428 : 294.0) no description available & (reliability: 1224.0) & (original description: Putative HPA, Description = Histidinol-phosphate aminotransferase, chloroplastic, PFAM = PF00155)' T '13.1.7.8' 'amino acid metabolism.synthesis.histidine.histidinol-phosphate synthase' '' '' '13.1.7.9' 'amino acid metabolism.synthesis.histidine.histidinol dehydrogenase' 'niben101scf04100_68262-78350' '(at5g63890 : 752.0) Encodes histidinol dehydrogenase. Up-regulated in response to UV-B.; histidinol dehydrogenase (HDH); FUNCTIONS IN: histidinol dehydrogenase activity; INVOLVED IN: response to UV, pollen development; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Histidinol dehydrogenase, conserved site (InterPro:IPR001692), Histidinol dehydrogenase, prokaryotic-type (InterPro:IPR012131); Has 9146 Blast hits to 9146 proteins in 2211 species: Archae - 179; Bacteria - 4194; Metazoa - 4; Fungi - 211; Plants - 72; Viruses - 0; Other Eukaryotes - 4486 (source: NCBI BLink). & (q5nay4|hisx_orysa : 745.0) Histidinol dehydrogenase, chloroplast precursor (EC 1.1.1.23) (HDH) - Oryza sativa (Rice) & (gnl|cdd|37908 : 673.0) no description available & (gnl|cdd|85047 : 566.0) no description available & (reliability: 1504.0) & (original description: Putative HISN8, Description = Histidinol dehydrogenase, chloroplastic, PFAM = PF00815)' T '13.1.7.9' 'amino acid metabolism.synthesis.histidine.histidinol dehydrogenase' 'niben101scf04628_13514-22399' '(at5g63890 : 710.0) Encodes histidinol dehydrogenase. Up-regulated in response to UV-B.; histidinol dehydrogenase (HDH); FUNCTIONS IN: histidinol dehydrogenase activity; INVOLVED IN: response to UV, pollen development; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Histidinol dehydrogenase, conserved site (InterPro:IPR001692), Histidinol dehydrogenase, prokaryotic-type (InterPro:IPR012131); Has 9146 Blast hits to 9146 proteins in 2211 species: Archae - 179; Bacteria - 4194; Metazoa - 4; Fungi - 211; Plants - 72; Viruses - 0; Other Eukaryotes - 4486 (source: NCBI BLink). & (q5nay4|hisx_orysa : 706.0) Histidinol dehydrogenase, chloroplast precursor (EC 1.1.1.23) (HDH) - Oryza sativa (Rice) & (gnl|cdd|37908 : 662.0) no description available & (gnl|cdd|85047 : 563.0) no description available & (reliability: 1420.0) & (original description: Putative his2, Description = Histidinol dehydrogenase, PFAM = PF00815)' T '13.1.7.9' 'amino acid metabolism.synthesis.histidine.histidinol dehydrogenase' 'niben101scf05437_13605-23047' '(at5g63890 : 737.0) Encodes histidinol dehydrogenase. Up-regulated in response to UV-B.; histidinol dehydrogenase (HDH); FUNCTIONS IN: histidinol dehydrogenase activity; INVOLVED IN: response to UV, pollen development; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Histidinol dehydrogenase, conserved site (InterPro:IPR001692), Histidinol dehydrogenase, prokaryotic-type (InterPro:IPR012131); Has 9146 Blast hits to 9146 proteins in 2211 species: Archae - 179; Bacteria - 4194; Metazoa - 4; Fungi - 211; Plants - 72; Viruses - 0; Other Eukaryotes - 4486 (source: NCBI BLink). & (q5nay4|hisx_orysa : 731.0) Histidinol dehydrogenase, chloroplast precursor (EC 1.1.1.23) (HDH) - Oryza sativa (Rice) & (gnl|cdd|37908 : 660.0) no description available & (gnl|cdd|85047 : 557.0) no description available & (reliability: 1474.0) & (original description: Putative hisD, Description = Histidinol dehydrogenase, PFAM = PF00815)' T '13.1.7.9' 'amino acid metabolism.synthesis.histidine.histidinol dehydrogenase' 'niben101scf05948_100438-110899' '(at5g63890 : 748.0) Encodes histidinol dehydrogenase. Up-regulated in response to UV-B.; histidinol dehydrogenase (HDH); FUNCTIONS IN: histidinol dehydrogenase activity; INVOLVED IN: response to UV, pollen development; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Histidinol dehydrogenase, conserved site (InterPro:IPR001692), Histidinol dehydrogenase, prokaryotic-type (InterPro:IPR012131); Has 9146 Blast hits to 9146 proteins in 2211 species: Archae - 179; Bacteria - 4194; Metazoa - 4; Fungi - 211; Plants - 72; Viruses - 0; Other Eukaryotes - 4486 (source: NCBI BLink). & (q5nay4|hisx_orysa : 728.0) Histidinol dehydrogenase, chloroplast precursor (EC 1.1.1.23) (HDH) - Oryza sativa (Rice) & (gnl|cdd|37908 : 668.0) no description available & (gnl|cdd|85047 : 561.0) no description available & (reliability: 1496.0) & (original description: Putative hisD, Description = Histidinol dehydrogenase, PFAM = PF00815)' T '13.1.7.10' 'amino acid metabolism.synthesis.histidine.imidazole glycerol phosphate synthase' '' '' '13.1.7.11' 'amino acid metabolism.synthesis.histidine.ribose-phosphate diphosphokinase' '' '' '13.1.7.1001' 'amino acid metabolism.synthesis.histidine' 'histidinol-p' 'amino acid synthesis.histidine' M '13.1.7.1002' 'amino acid metabolism.synthesis.histidine' 'histidine' 'amino acid synthesis.histidine' M '13.2' 'amino acid metabolism.degradation' '' '' '13.2.1' 'amino acid metabolism.degradation.central amino acid metabolism' '' '' '13.2.1.1' 'amino acid metabolism.degradation.central amino acid metabolism.GABA' '' '' '13.2.1.2' 'amino acid metabolism.degradation.central amino acid metabolism.aspartate' 'nbv0.5scaffold4089_26883-36819' '(at5g14760 : 953.0) At5g14760 encodes for L-aspartate oxidase involved in the early steps of NAD biosynthesis. In contrary to the EC 1.4.3.16 (l-aspartate oxidase - deaminating) the enzyme catalyzes the reaction L-aspartate + O2 = iminoaspartate (alpha-iminosuccinate) + H2O2; L-aspartate oxidase (AO); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, L-aspartate oxidase activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (InterPro:IPR015939), Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953), Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal (InterPro:IPR004112), L-aspartate oxidase (InterPro:IPR005288); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 1-1 (TAIR:AT5G66760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82800 : 568.0) no description available & (gnl|cdd|37614 : 551.0) no description available & (q6zdy8|dhsa_orysa : 246.0) Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial precursor (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) - Oryza sativa (Rice) & (reliability: 1906.0) & (original description: Putative AO, Description = L-aspartate oxidase, chloroplastic, PFAM = PF00890;PF02910)' T '13.2.1.2' 'amino acid metabolism.degradation.central amino acid metabolism.aspartate' 'niben044scf00001064ctg029_1-3762' '(at5g14760 : 578.0) At5g14760 encodes for L-aspartate oxidase involved in the early steps of NAD biosynthesis. In contrary to the EC 1.4.3.16 (l-aspartate oxidase - deaminating) the enzyme catalyzes the reaction L-aspartate + O2 = iminoaspartate (alpha-iminosuccinate) + H2O2; L-aspartate oxidase (AO); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, L-aspartate oxidase activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (InterPro:IPR015939), Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953), Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal (InterPro:IPR004112), L-aspartate oxidase (InterPro:IPR005288); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 1-1 (TAIR:AT5G66760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37614 : 354.0) no description available & (gnl|cdd|82800 : 354.0) no description available & (q6zdy8|dhsa_orysa : 162.0) Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial precursor (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) - Oryza sativa (Rice) & (reliability: 1156.0) & (original description: Putative nadB, Description = L-aspartate oxidase, PFAM = PF00890;PF02910)' T '13.2.1.2' 'amino acid metabolism.degradation.central amino acid metabolism.aspartate' 'niben044scf00007367ctg009_4693-9863' '(at5g14760 : 939.0) At5g14760 encodes for L-aspartate oxidase involved in the early steps of NAD biosynthesis. In contrary to the EC 1.4.3.16 (l-aspartate oxidase - deaminating) the enzyme catalyzes the reaction L-aspartate + O2 = iminoaspartate (alpha-iminosuccinate) + H2O2; L-aspartate oxidase (AO); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, L-aspartate oxidase activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (InterPro:IPR015939), Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953), Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal (InterPro:IPR004112), L-aspartate oxidase (InterPro:IPR005288); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 1-1 (TAIR:AT5G66760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30379 : 556.0) no description available & (gnl|cdd|37614 : 549.0) no description available & (q6zdy8|dhsa_orysa : 240.0) Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial precursor (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) - Oryza sativa (Rice) & (reliability: 1878.0) & (original description: Putative AO, Description = L-aspartate oxidase, chloroplastic, PFAM = PF00890;PF02910)' T '13.2.1.2' 'amino acid metabolism.degradation.central amino acid metabolism.aspartate' 'niben101scf00918_81365-87437' '(at5g14760 : 934.0) At5g14760 encodes for L-aspartate oxidase involved in the early steps of NAD biosynthesis. In contrary to the EC 1.4.3.16 (l-aspartate oxidase - deaminating) the enzyme catalyzes the reaction L-aspartate + O2 = iminoaspartate (alpha-iminosuccinate) + H2O2; L-aspartate oxidase (AO); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, L-aspartate oxidase activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (InterPro:IPR015939), Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953), Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal (InterPro:IPR004112), L-aspartate oxidase (InterPro:IPR005288); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 1-1 (TAIR:AT5G66760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82800 : 558.0) no description available & (gnl|cdd|37614 : 545.0) no description available & (q6zdy8|dhsa_orysa : 245.0) Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial precursor (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) - Oryza sativa (Rice) & (reliability: 1868.0) & (original description: Putative AO, Description = L-aspartate oxidase, chloroplastic, PFAM = PF00890;PF02910)' T '13.2.2' 'amino acid metabolism.degradation.glutamate family' '' '' '13.2.2.1' 'amino acid metabolism.degradation.glutamate family.glutamine' 'niben101scf03908_4341-12804' '(at5g13780 : 264.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT1G03150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38445 : 248.0) no description available & (gnl|cdd|30804 : 92.0) no description available & (reliability: 528.0) & (original description: Putative ard1, Description = N-alpha-acetyltransferase 10, PFAM = PF00583)' T '13.2.2.1' 'amino acid metabolism.degradation.glutamate family.glutamine' 'niben101scf14883_353813-360425' '(at5g13780 : 278.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT1G03150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38445 : 246.0) no description available & (gnl|cdd|30804 : 89.3) no description available & (reliability: 556.0) & (original description: Putative ard1, Description = N-alpha-acetyltransferase 10, PFAM = PF00583)' T '13.2.2.2' 'amino acid metabolism.degradation.glutamate family.proline' 'nbv0.3scaffold42276_14058-18002' '(at5g38710 : 526.0) Methylenetetrahydrofolate reductase family protein; FUNCTIONS IN: proline dehydrogenase activity; INVOLVED IN: oxidation reduction, proline catabolic process, glutamate biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Proline dehydrogenase (InterPro:IPR002872), Proline oxidase (InterPro:IPR015659); BEST Arabidopsis thaliana protein match is: Methylenetetrahydrofolate reductase family protein (TAIR:AT3G30775.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35407 : 410.0) no description available & (gnl|cdd|85571 : 217.0) no description available & (reliability: 1052.0) & (original description: Putative cig1, Description = CIG1, PFAM = PF01619)' T '13.2.2.2' 'amino acid metabolism.degradation.glutamate family.proline' 'niben044scf00004818ctg004_9368-14219' '(at5g38710 : 514.0) Methylenetetrahydrofolate reductase family protein; FUNCTIONS IN: proline dehydrogenase activity; INVOLVED IN: oxidation reduction, proline catabolic process, glutamate biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Proline dehydrogenase (InterPro:IPR002872), Proline oxidase (InterPro:IPR015659); BEST Arabidopsis thaliana protein match is: Methylenetetrahydrofolate reductase family protein (TAIR:AT3G30775.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35407 : 407.0) no description available & (gnl|cdd|85571 : 217.0) no description available & (reliability: 1028.0) & (original description: Putative cig1, Description = CIG1, PFAM = PF01619)' T '13.2.2.2' 'amino acid metabolism.degradation.glutamate family.proline' 'niben101scf00593_477373-488569' '(at5g62530 : 934.0) Encodes mitochondrial Delta-pyrroline-5- carboxylate dehydrogenase. Involved in the catabolism of proline to glutamate. Involved in protection from proline toxicity. Induced at pathogen infection sites. P5CDH and SRO5 (an overlapping gene in the sense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.; aldehyde dehydrogenase 12A1 (ALDH12A1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, cobalt ion binding, zinc ion binding, 1-pyrroline-5-carboxylate dehydrogenase activity; INVOLVED IN: oxygen and reactive oxygen species metabolic process, response to salt stress, proline catabolic process to glutamate, proline metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 7B4 (TAIR:AT1G54100.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84580 : 135.0) no description available & (gnl|cdd|37661 : 91.1) no description available & (reliability: 1868.0) & (original description: Putative ald1, Description = Aldehyde dehydrogenase, PFAM = PF00171)' T '13.2.2.2' 'amino acid metabolism.degradation.glutamate family.proline' 'niben101scf02738_138112-144573' '(at5g38710 : 518.0) Methylenetetrahydrofolate reductase family protein; FUNCTIONS IN: proline dehydrogenase activity; INVOLVED IN: oxidation reduction, proline catabolic process, glutamate biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Proline dehydrogenase (InterPro:IPR002872), Proline oxidase (InterPro:IPR015659); BEST Arabidopsis thaliana protein match is: Methylenetetrahydrofolate reductase family protein (TAIR:AT3G30775.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35407 : 412.0) no description available & (gnl|cdd|85571 : 218.0) no description available & (reliability: 1036.0) & (original description: Putative cig1, Description = CIG1, PFAM = PF01619)' T '13.2.2.2' 'amino acid metabolism.degradation.glutamate family.proline' 'niben101scf02738_174078-178225' '(at5g38710 : 518.0) Methylenetetrahydrofolate reductase family protein; FUNCTIONS IN: proline dehydrogenase activity; INVOLVED IN: oxidation reduction, proline catabolic process, glutamate biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Proline dehydrogenase (InterPro:IPR002872), Proline oxidase (InterPro:IPR015659); BEST Arabidopsis thaliana protein match is: Methylenetetrahydrofolate reductase family protein (TAIR:AT3G30775.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35407 : 406.0) no description available & (gnl|cdd|85571 : 210.0) no description available & (reliability: 1036.0) & (original description: Putative POX2, Description = Proline dehydrogenase 2, mitochondrial, PFAM = PF01619)' T '13.2.2.2' 'amino acid metabolism.degradation.glutamate family.proline' 'niben101scf05166_561931-572580' '(at5g62530 : 935.0) Encodes mitochondrial Delta-pyrroline-5- carboxylate dehydrogenase. Involved in the catabolism of proline to glutamate. Involved in protection from proline toxicity. Induced at pathogen infection sites. P5CDH and SRO5 (an overlapping gene in the sense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.; aldehyde dehydrogenase 12A1 (ALDH12A1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, cobalt ion binding, zinc ion binding, 1-pyrroline-5-carboxylate dehydrogenase activity; INVOLVED IN: oxygen and reactive oxygen species metabolic process, response to salt stress, proline catabolic process to glutamate, proline metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 7B4 (TAIR:AT1G54100.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84580 : 137.0) no description available & (gnl|cdd|37661 : 91.1) no description available & (reliability: 1870.0) & (original description: Putative ald1, Description = Aldehyde dehydrogenase, PFAM = PF00171)' T '13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'nbv0.3scaffold10983_22099-28642' '(at4g08900 : 585.0) Encodes an arginase, likely to be involved in polyamine biosynthesis in pollen.; arginase; FUNCTIONS IN: arginase activity, cobalt ion binding, agmatinase activity; INVOLVED IN: defense response to bacterium, arginine catabolic process, polyamine metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: Ureohydrolase (InterPro:IPR006035), Ureohydrolase, manganese-binding site (InterPro:IPR020855); BEST Arabidopsis thaliana protein match is: Arginase/deacetylase superfamily protein (TAIR:AT4G08870.1); Has 9226 Blast hits to 9224 proteins in 1712 species: Archae - 292; Bacteria - 4928; Metazoa - 419; Fungi - 376; Plants - 74; Viruses - 0; Other Eukaryotes - 3137 (source: NCBI BLink). & (o49046|argi_soybn : 505.0) Arginase (EC 3.5.3.1) - Glycine max (Soybean) & (gnl|cdd|38175 : 420.0) no description available & (gnl|cdd|84810 : 252.0) no description available & (reliability: 1170.0) & (original description: Putative gbh, Description = Agmatinase, PFAM = PF00491)' T '13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'nbv0.3scaffold30295_1-7750' '(at2g34470 : 466.0) Encodes a urease accessory protein which is essential for the activation of plant urease.; urease accessory protein G (UREG); FUNCTIONS IN: nickel ion binding, nucleotide binding, metal ion binding, ATP binding; INVOLVED IN: nitrogen compound metabolic process, positive regulation of metalloenzyme activity; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Urease accessory protein UreG (InterPro:IPR004400), [NiFe]-hydrogenase/urease maturation factor, Ni(2+)-binding GTPase (InterPro:IPR012202), Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30727 : 204.0) no description available & (reliability: 932.0) & (original description: Putative ureG, Description = Urease accessory protein G, PFAM = PF02492)' T '13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'nbv0.5scaffold89_445512-449843' '(at2g35035 : 215.0) Encodes a urease accessory protein which is essential for the activation of plant urease.; urease accessory protein D (URED); FUNCTIONS IN: nickel ion binding; INVOLVED IN: nitrogen compound metabolic process, positive regulation of metalloenzyme activity; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Urease accessory protein UreD (InterPro:IPR002669). & (gnl|cdd|31171 : 93.8) no description available & (reliability: 430.0) & (original description: Putative ureD, Description = Urease accessory protein D, PFAM = PF01774)' T '13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'nbv0.5scaffold108_1233673-1248276' '(at5g46180 : 498.0) Encodes an ornithine delta-aminotransferase that is transcriptionally up-regulated in young seedlings and in response to salt stress. It is unlikely to play a role in salt-stress-induced proline accumulation, however, it appears to participate in arginine and ornithine catabolism.; ornithine-delta-aminotransferase (DELTA-OAT); FUNCTIONS IN: ornithine-oxo-acid transaminase activity, zinc ion binding; INVOLVED IN: ornithine catabolic process, hyperosmotic salinity response, proline biosynthetic process, arginine catabolic process to glutamate; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Ornithine aminotransferase (InterPro:IPR010164), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36616 : 398.0) no description available & (gnl|cdd|34597 : 325.0) no description available & (q6yze2|gsa_orysa : 95.5) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Oryza sativa (Rice) & (reliability: 996.0) & (original description: Putative OAT1, Description = OAT1, PFAM = PF00202;PF00202)' T '13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'nbv0.5scaffold607_143973-154178' '(gnl|cdd|36616 : 235.0) no description available & (at5g46180 : 234.0) Encodes an ornithine delta-aminotransferase that is transcriptionally up-regulated in young seedlings and in response to salt stress. It is unlikely to play a role in salt-stress-induced proline accumulation, however, it appears to participate in arginine and ornithine catabolism.; ornithine-delta-aminotransferase (DELTA-OAT); FUNCTIONS IN: ornithine-oxo-acid transaminase activity, zinc ion binding; INVOLVED IN: ornithine catabolic process, hyperosmotic salinity response, proline biosynthetic process, arginine catabolic process to glutamate; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Ornithine aminotransferase (InterPro:IPR010164), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|74563 : 171.0) no description available & (reliability: 468.0) & (original description: Putative car2, Description = Ornithine aminotransferase, PFAM = PF00202)' T '13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'nbv0.5scaffold716_97374-169141' '(at4g08900 : 231.0) Encodes an arginase, likely to be involved in polyamine biosynthesis in pollen.; arginase; FUNCTIONS IN: arginase activity, cobalt ion binding, agmatinase activity; INVOLVED IN: defense response to bacterium, arginine catabolic process, polyamine metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: Ureohydrolase (InterPro:IPR006035), Ureohydrolase, manganese-binding site (InterPro:IPR020855); BEST Arabidopsis thaliana protein match is: Arginase/deacetylase superfamily protein (TAIR:AT4G08870.1); Has 9226 Blast hits to 9224 proteins in 1712 species: Archae - 292; Bacteria - 4928; Metazoa - 419; Fungi - 376; Plants - 74; Viruses - 0; Other Eukaryotes - 3137 (source: NCBI BLink). & (o49046|argi_soybn : 200.0) Arginase (EC 3.5.3.1) - Glycine max (Soybean) & (gnl|cdd|38175 : 161.0) no description available & (reliability: 462.0) & (original description: Putative AG1, Description = Arginase, PFAM = PF00491)' T '13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'nbv0.5scaffold716_162596-165671' '(at4g08900 : 364.0) Encodes an arginase, likely to be involved in polyamine biosynthesis in pollen.; arginase; FUNCTIONS IN: arginase activity, cobalt ion binding, agmatinase activity; INVOLVED IN: defense response to bacterium, arginine catabolic process, polyamine metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: Ureohydrolase (InterPro:IPR006035), Ureohydrolase, manganese-binding site (InterPro:IPR020855); BEST Arabidopsis thaliana protein match is: Arginase/deacetylase superfamily protein (TAIR:AT4G08870.1); Has 9226 Blast hits to 9224 proteins in 1712 species: Archae - 292; Bacteria - 4928; Metazoa - 419; Fungi - 376; Plants - 74; Viruses - 0; Other Eukaryotes - 3137 (source: NCBI BLink). & (o49046|argi_soybn : 316.0) Arginase (EC 3.5.3.1) - Glycine max (Soybean) & (gnl|cdd|38175 : 265.0) no description available & (gnl|cdd|84810 : 197.0) no description available & (reliability: 728.0) & (original description: Putative gbh, Description = Agmatinase, PFAM = PF00491)' T '13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'niben044scf00030458ctg004_1-9479' '(at2g35035 : 299.0) Encodes a urease accessory protein which is essential for the activation of plant urease.; urease accessory protein D (URED); FUNCTIONS IN: nickel ion binding; INVOLVED IN: nitrogen compound metabolic process, positive regulation of metalloenzyme activity; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Urease accessory protein UreD (InterPro:IPR002669). & (gnl|cdd|31171 : 90.7) no description available & (reliability: 598.0) & (original description: Putative URED, Description = Urease accessory protein D, PFAM = PF01774)' T '13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'niben044scf00050380ctg002_1-2939' '(at2g34470 : 323.0) Encodes a urease accessory protein which is essential for the activation of plant urease.; urease accessory protein G (UREG); FUNCTIONS IN: nickel ion binding, nucleotide binding, metal ion binding, ATP binding; INVOLVED IN: nitrogen compound metabolic process, positive regulation of metalloenzyme activity; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Urease accessory protein UreG (InterPro:IPR004400), [NiFe]-hydrogenase/urease maturation factor, Ni(2+)-binding GTPase (InterPro:IPR012202), Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30727 : 174.0) no description available & (reliability: 646.0) & (original description: Putative ureG, Description = Urease accessory protein UreG, PFAM = PF02492)' T '13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'niben101scf01125_297072-305748' '(o04016|p5cr_actch : 412.0) Pyrroline-5-carboxylate reductase (EC 1.5.1.2) (P5CR) (P5C reductase) - Actinidia chinensis (Kiwi) (Yangtao) & (at5g14800 : 367.0) Delta 1-pyrroline-5-carboxylate reductase, catalyzes the final step in proline biosynthesis from glutamate and ornithine.In situ hybridization indicated that under normal growth conditions, the highest concentration of P5CR transcripts occurs in the cortical parenchyma, phloem, vascular cambium and pith parenchyma in the vicinity of the protoxylem. Single gene in Arabidopsis.; pyrroline-5- carboxylate (P5C) reductase (P5CR); CONTAINS InterPro DOMAIN/s: NADP oxidoreductase, coenzyme F420-dependent (InterPro:IPR004455), NAD(P)-binding domain (InterPro:IPR016040), Delta 1-pyrroline-5-carboxylate reductase (InterPro:IPR000304); Has 7429 Blast hits to 7426 proteins in 2378 species: Archae - 102; Bacteria - 5104; Metazoa - 368; Fungi - 229; Plants - 70; Viruses - 0; Other Eukaryotes - 1556 (source: NCBI BLink). & (gnl|cdd|38334 : 289.0) no description available & (gnl|cdd|84017 : 270.0) no description available & (reliability: 734.0) & (original description: Putative p5cr, Description = Pyrroline-5-carboxylate reductase, PFAM = PF14748;PF03807)' T '13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'niben101scf03932_430677-448178' '(at5g46180 : 725.0) Encodes an ornithine delta-aminotransferase that is transcriptionally up-regulated in young seedlings and in response to salt stress. It is unlikely to play a role in salt-stress-induced proline accumulation, however, it appears to participate in arginine and ornithine catabolism.; ornithine-delta-aminotransferase (DELTA-OAT); FUNCTIONS IN: ornithine-oxo-acid transaminase activity, zinc ion binding; INVOLVED IN: ornithine catabolic process, hyperosmotic salinity response, proline biosynthetic process, arginine catabolic process to glutamate; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Ornithine aminotransferase (InterPro:IPR010164), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36616 : 631.0) no description available & (gnl|cdd|74563 : 488.0) no description available & (q6yze2|gsa_orysa : 131.0) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Oryza sativa (Rice) & (reliability: 1450.0) & (original description: Putative oat, Description = Ornithine aminotransferase, PFAM = PF00202)' T '13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'niben101scf04506_349171-373700' '(at1g67550 : 1239.0) Encodes a nickel-containing urea hydrolase involved in nitrogen recycling. It requires three urease accessory proteins for its activation.; urease (URE); CONTAINS InterPro DOMAIN/s: Urease, alpha subunit (InterPro:IPR005848), Urease, alpha subunit, conserved site (InterPro:IPR017950), Amidohydrolase 1 (InterPro:IPR006680), Urease, alpha/gamma subunit (InterPro:IPR002026), Urease, alpha subunit, core (InterPro:IPR017952), Metal-dependent hydrolase, composite domain (InterPro:IPR011059), Urease, beta subunit (InterPro:IPR002019), Urease (InterPro:IPR008221), Urease, alpha subunit, C-terminal (InterPro:IPR017951), Urease alpha-subunit, N-terminal (InterPro:IPR011612); Has 10097 Blast hits to 10094 proteins in 1139 species: Archae - 93; Bacteria - 7117; Metazoa - 16; Fungi - 228; Plants - 47; Viruses - 0; Other Eukaryotes - 2596 (source: NCBI BLink). & (gnl|cdd|30031 : 993.0) no description available & (p08298|urea_soybn : 221.0) Urease (EC 3.5.1.5) (Urea amidohydrolase) (Fragment) - Glycine max (Soybean) & (reliability: 2478.0) & (original description: Putative ure, Description = Urease, PFAM = PF00449;PF00547;PF00699;PF01979)' T '13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'niben101scf04703_936682-943642' '(at4g08900 : 594.0) Encodes an arginase, likely to be involved in polyamine biosynthesis in pollen.; arginase; FUNCTIONS IN: arginase activity, cobalt ion binding, agmatinase activity; INVOLVED IN: defense response to bacterium, arginine catabolic process, polyamine metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: Ureohydrolase (InterPro:IPR006035), Ureohydrolase, manganese-binding site (InterPro:IPR020855); BEST Arabidopsis thaliana protein match is: Arginase/deacetylase superfamily protein (TAIR:AT4G08870.1); Has 9226 Blast hits to 9224 proteins in 1712 species: Archae - 292; Bacteria - 4928; Metazoa - 419; Fungi - 376; Plants - 74; Viruses - 0; Other Eukaryotes - 3137 (source: NCBI BLink). & (o49046|argi_soybn : 511.0) Arginase (EC 3.5.3.1) - Glycine max (Soybean) & (gnl|cdd|38175 : 427.0) no description available & (gnl|cdd|84810 : 259.0) no description available & (reliability: 1188.0) & (original description: Putative ARGAH1, Description = Arginase 1, mitochondrial, PFAM = PF00491)' T '13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'niben101scf05342_122837-137807' '(at1g67550 : 1311.0) Encodes a nickel-containing urea hydrolase involved in nitrogen recycling. It requires three urease accessory proteins for its activation.; urease (URE); CONTAINS InterPro DOMAIN/s: Urease, alpha subunit (InterPro:IPR005848), Urease, alpha subunit, conserved site (InterPro:IPR017950), Amidohydrolase 1 (InterPro:IPR006680), Urease, alpha/gamma subunit (InterPro:IPR002026), Urease, alpha subunit, core (InterPro:IPR017952), Metal-dependent hydrolase, composite domain (InterPro:IPR011059), Urease, beta subunit (InterPro:IPR002019), Urease (InterPro:IPR008221), Urease, alpha subunit, C-terminal (InterPro:IPR017951), Urease alpha-subunit, N-terminal (InterPro:IPR011612); Has 10097 Blast hits to 10094 proteins in 1139 species: Archae - 93; Bacteria - 7117; Metazoa - 16; Fungi - 228; Plants - 47; Viruses - 0; Other Eukaryotes - 2596 (source: NCBI BLink). & (gnl|cdd|30031 : 990.0) no description available & (p08298|urea_soybn : 221.0) Urease (EC 3.5.1.5) (Urea amidohydrolase) (Fragment) - Glycine max (Soybean) & (reliability: 2622.0) & (original description: Putative ure, Description = Urease, PFAM = PF01979;PF00547;PF00699;PF00449)' T '13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'niben101scf08792_52590-100930' '(at2g34470 : 477.0) Encodes a urease accessory protein which is essential for the activation of plant urease.; urease accessory protein G (UREG); FUNCTIONS IN: nickel ion binding, nucleotide binding, metal ion binding, ATP binding; INVOLVED IN: nitrogen compound metabolic process, positive regulation of metalloenzyme activity; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Urease accessory protein UreG (InterPro:IPR004400), [NiFe]-hydrogenase/urease maturation factor, Ni(2+)-binding GTPase (InterPro:IPR012202), Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30727 : 209.0) no description available & (reliability: 954.0) & (original description: Putative ureG, Description = Urease accessory protein UreG, PFAM = PF03188;PF02492)' T '13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'niben101scf08792_74938-83047' '(at2g34470 : 466.0) Encodes a urease accessory protein which is essential for the activation of plant urease.; urease accessory protein G (UREG); FUNCTIONS IN: nickel ion binding, nucleotide binding, metal ion binding, ATP binding; INVOLVED IN: nitrogen compound metabolic process, positive regulation of metalloenzyme activity; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Urease accessory protein UreG (InterPro:IPR004400), [NiFe]-hydrogenase/urease maturation factor, Ni(2+)-binding GTPase (InterPro:IPR012202), Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30727 : 203.0) no description available & (reliability: 932.0) & (original description: Putative ureG, Description = Urease accessory protein G, PFAM = PF02492)' T '13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'niben101scf12102_32281-46580' '(at2g35035 : 397.0) Encodes a urease accessory protein which is essential for the activation of plant urease.; urease accessory protein D (URED); FUNCTIONS IN: nickel ion binding; INVOLVED IN: nitrogen compound metabolic process, positive regulation of metalloenzyme activity; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Urease accessory protein UreD (InterPro:IPR002669). & (gnl|cdd|31171 : 149.0) no description available & (reliability: 794.0) & (original description: Putative ureD, Description = Putative urease accessory protein D, PFAM = PF01774)' T '13.2.2.3.1' 'amino acid metabolism.degradation.glutamate family.arginine.arginase' '' '' '13.2.2.3.2' 'amino acid metabolism.degradation.glutamate family.arginine.agmatinase' '' '' '13.2.2.3.3' 'amino acid metabolism.degradation.glutamate family.arginine.urease' '' '' '13.2.2.3.1001' 'amino acid metabolism.degradation.glutamate family.arginine' 'urea' 'amino acid synthesis.arginine; amino acid degradation.arginine' M '13.2.3' 'amino acid metabolism.degradation.aspartate family' '' '' '13.2.3.1' 'amino acid metabolism.degradation.aspartate family.asparagine' '' '' '13.2.3.1.1' 'amino acid metabolism.degradation.aspartate family.asparagine.L-asparaginase' 'nbv0.5scaffold924_319470-326840' '(at5g61540 : 380.0) N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; FUNCTIONS IN: asparaginase activity, hydrolase activity; INVOLVED IN: glycoprotein catabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase T2, asparaginase 2 (InterPro:IPR000246); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT3G16150.1); Has 2748 Blast hits to 2738 proteins in 812 species: Archae - 113; Bacteria - 1407; Metazoa - 453; Fungi - 78; Plants - 148; Viruses - 0; Other Eukaryotes - 549 (source: NCBI BLink). & (gnl|cdd|36806 : 361.0) no description available & (gnl|cdd|72875 : 282.0) no description available & (reliability: 760.0) & (original description: Putative aga, Description = LOC496249 protein, PFAM = PF01112)' T '13.2.3.1.1' 'amino acid metabolism.degradation.aspartate family.asparagine.L-asparaginase' 'nbv0.5scaffold8464_1-8355' '(at4g00590 : 319.0) N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase T2, asparaginase 2 (InterPro:IPR000246); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT3G16150.1). & (gnl|cdd|36805 : 198.0) no description available & (gnl|cdd|72876 : 143.0) no description available & (reliability: 638.0) & (original description: Putative At4g00590, Description = Putative threonine aspartase, PFAM = PF01112)' T '13.2.3.1.1' 'amino acid metabolism.degradation.aspartate family.asparagine.L-asparaginase' 'niben101scf01143_233381-237898' '(q9zsd6|aspg_luplu : 440.0) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine amidohydrolase) [Contains: L-asparaginase subunit alpha; L-asparaginase subunit beta] - Lupinus luteus (European yellow lupin) & (at5g08100 : 439.0) N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; CONTAINS InterPro DOMAIN/s: Peptidase T2, asparaginase 2 (InterPro:IPR000246); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT3G16150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85245 : 390.0) no description available & (gnl|cdd|36805 : 333.0) no description available & (reliability: 878.0) & (original description: Putative ansA, Description = Isoaspartyl peptidase, PFAM = PF01112)' T '13.2.3.1.1' 'amino acid metabolism.degradation.aspartate family.asparagine.L-asparaginase' 'niben101scf03809_260123-269997' '(at5g61540 : 443.0) N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; FUNCTIONS IN: asparaginase activity, hydrolase activity; INVOLVED IN: glycoprotein catabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase T2, asparaginase 2 (InterPro:IPR000246); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT3G16150.1); Has 2748 Blast hits to 2738 proteins in 812 species: Archae - 113; Bacteria - 1407; Metazoa - 453; Fungi - 78; Plants - 148; Viruses - 0; Other Eukaryotes - 549 (source: NCBI BLink). & (gnl|cdd|36806 : 406.0) no description available & (gnl|cdd|72875 : 334.0) no description available & (reliability: 886.0) & (original description: Putative aga, Description = N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase, PFAM = PF01112)' T '13.2.3.1.1' 'amino acid metabolism.degradation.aspartate family.asparagine.L-asparaginase' 'niben101scf04410_395476-401609' '(q9zsd6|aspg_luplu : 437.0) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine amidohydrolase) [Contains: L-asparaginase subunit alpha; L-asparaginase subunit beta] - Lupinus luteus (European yellow lupin) & (at5g08100 : 424.0) N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; CONTAINS InterPro DOMAIN/s: Peptidase T2, asparaginase 2 (InterPro:IPR000246); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT3G16150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85245 : 383.0) no description available & (gnl|cdd|36805 : 324.0) no description available & (reliability: 848.0) & (original description: Putative ansA, Description = Isoaspartyl peptidase, PFAM = PF01112)' T '13.2.3.1.1' 'amino acid metabolism.degradation.aspartate family.asparagine.L-asparaginase' 'niben101scf05643_551718-555311' '(at3g16150 : 540.0) N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; CONTAINS InterPro DOMAIN/s: Peptidase T2, asparaginase 2 (InterPro:IPR000246); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT5G08100.1); Has 3285 Blast hits to 3219 proteins in 891 species: Archae - 113; Bacteria - 1512; Metazoa - 512; Fungi - 247; Plants - 200; Viruses - 0; Other Eukaryotes - 701 (source: NCBI BLink). & (q9zsd6|aspg_luplu : 355.0) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine amidohydrolase) [Contains: L-asparaginase subunit alpha; L-asparaginase subunit beta] - Lupinus luteus (European yellow lupin) & (gnl|cdd|36805 : 336.0) no description available & (gnl|cdd|85245 : 304.0) no description available & (reliability: 1080.0) & (original description: Putative aspG, Description = Isoaspartyl peptidase, PFAM = PF01112)' T '13.2.3.2' 'amino acid metabolism.degradation.aspartate family.threonine' 'niben101scf01693_156962-164179' '(o49818|lgul_cicar : 321.0) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) - Cicer arietinum (Chickpea) (Garbanzo) & (at1g08110 : 298.0) lactoylglutathione lyase family protein / glyoxalase I family protein; FUNCTIONS IN: calmodulin binding, lactoylglutathione lyase activity; INVOLVED IN: response to cadmium ion, carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase I (InterPro:IPR004361), Glyoxalase I, conserved site (InterPro:IPR018146), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein (TAIR:AT1G67280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38155 : 229.0) no description available & (gnl|cdd|77707 : 102.0) no description available & (reliability: 596.0) & (original description: Putative GLX1, Description = Lactoylglutathione lyase, PFAM = PF00903)' T '13.2.3.2' 'amino acid metabolism.degradation.aspartate family.threonine' 'niben101scf04560_765453-771333' '(o49818|lgul_cicar : 303.0) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) - Cicer arietinum (Chickpea) (Garbanzo) & (at1g08110 : 284.0) lactoylglutathione lyase family protein / glyoxalase I family protein; FUNCTIONS IN: calmodulin binding, lactoylglutathione lyase activity; INVOLVED IN: response to cadmium ion, carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase I (InterPro:IPR004361), Glyoxalase I, conserved site (InterPro:IPR018146), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein (TAIR:AT1G67280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38155 : 227.0) no description available & (gnl|cdd|77707 : 103.0) no description available & (reliability: 568.0) & (original description: Putative GLX1, Description = Lactoylglutathione lyase, PFAM = PF00903)' T '13.2.3.2.1001' 'amino acid metabolism.degradation.aspartate family.threonine' 'methylglyoxal' 'amino acid metabolism.threonine; amino acid degradation.threonine' M '13.2.3.4' 'amino acid metabolism.degradation.aspartate family.methionine' 'nbv0.3scaffold26798_18616-26710' '(at1g66520 : 361.0) pigment defective 194 (pde194); FUNCTIONS IN: hydroxymethyl-, formyl- and related transferase activity, formyltetrahydrofolate deformylase activity, catalytic activity; INVOLVED IN: purine ribonucleotide biosynthetic process, biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Formyl transferase, C-terminal (InterPro:IPR005793), Methionine tRNA Formyltransferase-like (InterPro:IPR015518), Formyl transferase, C-terminal-like (InterPro:IPR011034), Formyl transferase, N-terminal (InterPro:IPR002376); Has 18100 Blast hits to 18093 proteins in 2820 species: Archae - 107; Bacteria - 12760; Metazoa - 410; Fungi - 163; Plants - 151; Viruses - 3; Other Eukaryotes - 4506 (source: NCBI BLink). & (gnl|cdd|80440 : 226.0) no description available & (gnl|cdd|38292 : 221.0) no description available & (reliability: 722.0) & (original description: Putative fmt, Description = Protein pigment defective 194, PFAM = PF00551)' T '13.2.3.4' 'amino acid metabolism.degradation.aspartate family.methionine' 'nbv0.5scaffold2231_237452-245310' '(at1g66520 : 487.0) pigment defective 194 (pde194); FUNCTIONS IN: hydroxymethyl-, formyl- and related transferase activity, formyltetrahydrofolate deformylase activity, catalytic activity; INVOLVED IN: purine ribonucleotide biosynthetic process, biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Formyl transferase, C-terminal (InterPro:IPR005793), Methionine tRNA Formyltransferase-like (InterPro:IPR015518), Formyl transferase, C-terminal-like (InterPro:IPR011034), Formyl transferase, N-terminal (InterPro:IPR002376); Has 18100 Blast hits to 18093 proteins in 2820 species: Archae - 107; Bacteria - 12760; Metazoa - 410; Fungi - 163; Plants - 151; Viruses - 3; Other Eukaryotes - 4506 (source: NCBI BLink). & (gnl|cdd|38292 : 288.0) no description available & (gnl|cdd|80440 : 262.0) no description available & (reliability: 974.0) & (original description: Putative ppd194, Description = Protein pigment defective 194, PFAM = PF00551;PF02911)' T '13.2.3.4' 'amino acid metabolism.degradation.aspartate family.methionine' 'niben101scf01171_312308-316508' '(p68173|sahh_tobac : 955.0) Adenosylhomocysteinase (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) (Cytokinin-binding protein CBP57) - Nicotiana tabacum (Common tobacco) & (at4g13940 : 917.0) Encodes a S-adenosyl-L-homocysteine hydrolase required for DNA methylation-dependent gene silencing.; HOMOLOGY-DEPENDENT GENE SILENCING 1 (HOG1); FUNCTIONS IN: adenosylhomocysteinase activity; INVOLVED IN: methylation-dependent chromatin silencing, one-carbon metabolic process, posttranscriptional gene silencing, embryo development ending in seed dormancy; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 34 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosyl-L-homocysteine hydrolase (InterPro:IPR000043), S-adenosyl-L-homocysteine hydrolase, conserved site (InterPro:IPR020082), NAD(P)-binding domain (InterPro:IPR016040), S-adenosyl-L-homocysteine hydrolase, NAD binding (InterPro:IPR015878); BEST Arabidopsis thaliana protein match is: S-adenosyl-l-homocysteine (SAH) hydrolase 2 (TAIR:AT3G23810.1); Has 6788 Blast hits to 6786 proteins in 1444 species: Archae - 223; Bacteria - 2243; Metazoa - 514; Fungi - 135; Plants - 203; Viruses - 0; Other Eukaryotes - 3470 (source: NCBI BLink). & (gnl|cdd|80108 : 738.0) no description available & (gnl|cdd|36584 : 690.0) no description available & (reliability: 1834.0) & (original description: Putative SAHH1, Description = Adenosylhomocysteinase 1, PFAM = PF00670;PF05221)' T '13.2.3.4' 'amino acid metabolism.degradation.aspartate family.methionine' 'niben101scf01640_388915-397208' '(at1g66520 : 362.0) pigment defective 194 (pde194); FUNCTIONS IN: hydroxymethyl-, formyl- and related transferase activity, formyltetrahydrofolate deformylase activity, catalytic activity; INVOLVED IN: purine ribonucleotide biosynthetic process, biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Formyl transferase, C-terminal (InterPro:IPR005793), Methionine tRNA Formyltransferase-like (InterPro:IPR015518), Formyl transferase, C-terminal-like (InterPro:IPR011034), Formyl transferase, N-terminal (InterPro:IPR002376); Has 18100 Blast hits to 18093 proteins in 2820 species: Archae - 107; Bacteria - 12760; Metazoa - 410; Fungi - 163; Plants - 151; Viruses - 3; Other Eukaryotes - 4506 (source: NCBI BLink). & (gnl|cdd|80440 : 226.0) no description available & (gnl|cdd|38292 : 224.0) no description available & (reliability: 724.0) & (original description: Putative fmt, Description = Methionyl-tRNA formyltransferase, PFAM = PF00551)' T '13.2.3.4' 'amino acid metabolism.degradation.aspartate family.methionine' 'niben101scf02853_496654-505287' '(q01781|sahh_petcr : 311.0) Adenosylhomocysteinase (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at4g13940 : 300.0) Encodes a S-adenosyl-L-homocysteine hydrolase required for DNA methylation-dependent gene silencing.; HOMOLOGY-DEPENDENT GENE SILENCING 1 (HOG1); FUNCTIONS IN: adenosylhomocysteinase activity; INVOLVED IN: methylation-dependent chromatin silencing, one-carbon metabolic process, posttranscriptional gene silencing, embryo development ending in seed dormancy; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 34 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosyl-L-homocysteine hydrolase (InterPro:IPR000043), S-adenosyl-L-homocysteine hydrolase, conserved site (InterPro:IPR020082), NAD(P)-binding domain (InterPro:IPR016040), S-adenosyl-L-homocysteine hydrolase, NAD binding (InterPro:IPR015878); BEST Arabidopsis thaliana protein match is: S-adenosyl-l-homocysteine (SAH) hydrolase 2 (TAIR:AT3G23810.1); Has 6788 Blast hits to 6786 proteins in 1444 species: Archae - 223; Bacteria - 2243; Metazoa - 514; Fungi - 135; Plants - 203; Viruses - 0; Other Eukaryotes - 3470 (source: NCBI BLink). & (gnl|cdd|80108 : 282.0) no description available & (gnl|cdd|36584 : 265.0) no description available & (reliability: 600.0) & (original description: Putative abcY, Description = Adenosylhomocysteinase, PFAM = PF00670;PF05221)' T '13.2.3.4' 'amino acid metabolism.degradation.aspartate family.methionine' 'niben101scf09136_1814-6910' '(p68173|sahh_tobac : 899.0) Adenosylhomocysteinase (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) (Cytokinin-binding protein CBP57) - Nicotiana tabacum (Common tobacco) & (at4g13940 : 845.0) Encodes a S-adenosyl-L-homocysteine hydrolase required for DNA methylation-dependent gene silencing.; HOMOLOGY-DEPENDENT GENE SILENCING 1 (HOG1); FUNCTIONS IN: adenosylhomocysteinase activity; INVOLVED IN: methylation-dependent chromatin silencing, one-carbon metabolic process, posttranscriptional gene silencing, embryo development ending in seed dormancy; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 34 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosyl-L-homocysteine hydrolase (InterPro:IPR000043), S-adenosyl-L-homocysteine hydrolase, conserved site (InterPro:IPR020082), NAD(P)-binding domain (InterPro:IPR016040), S-adenosyl-L-homocysteine hydrolase, NAD binding (InterPro:IPR015878); BEST Arabidopsis thaliana protein match is: S-adenosyl-l-homocysteine (SAH) hydrolase 2 (TAIR:AT3G23810.1); Has 6788 Blast hits to 6786 proteins in 1444 species: Archae - 223; Bacteria - 2243; Metazoa - 514; Fungi - 135; Plants - 203; Viruses - 0; Other Eukaryotes - 3470 (source: NCBI BLink). & (gnl|cdd|80108 : 727.0) no description available & (gnl|cdd|36584 : 678.0) no description available & (reliability: 1690.0) & (original description: Putative SAHH, Description = Adenosylhomocysteinase, PFAM = PF00670;PF05221)' T '13.2.3.4' 'amino acid metabolism.degradation.aspartate family.methionine' 'niben101scf10608_187215-192416' '(p68173|sahh_tobac : 934.0) Adenosylhomocysteinase (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) (Cytokinin-binding protein CBP57) - Nicotiana tabacum (Common tobacco) & (at4g13940 : 880.0) Encodes a S-adenosyl-L-homocysteine hydrolase required for DNA methylation-dependent gene silencing.; HOMOLOGY-DEPENDENT GENE SILENCING 1 (HOG1); FUNCTIONS IN: adenosylhomocysteinase activity; INVOLVED IN: methylation-dependent chromatin silencing, one-carbon metabolic process, posttranscriptional gene silencing, embryo development ending in seed dormancy; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 34 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosyl-L-homocysteine hydrolase (InterPro:IPR000043), S-adenosyl-L-homocysteine hydrolase, conserved site (InterPro:IPR020082), NAD(P)-binding domain (InterPro:IPR016040), S-adenosyl-L-homocysteine hydrolase, NAD binding (InterPro:IPR015878); BEST Arabidopsis thaliana protein match is: S-adenosyl-l-homocysteine (SAH) hydrolase 2 (TAIR:AT3G23810.1); Has 6788 Blast hits to 6786 proteins in 1444 species: Archae - 223; Bacteria - 2243; Metazoa - 514; Fungi - 135; Plants - 203; Viruses - 0; Other Eukaryotes - 3470 (source: NCBI BLink). & (gnl|cdd|80108 : 739.0) no description available & (gnl|cdd|36584 : 689.0) no description available & (reliability: 1760.0) & (original description: Putative SAHH, Description = Adenosylhomocysteinase, PFAM = PF05221;PF00670)' T '13.2.3.4.1' 'amino acid metabolism.degradation.aspartate family.methionine.methionine gamma-lyase' 'niben044scf00033216ctg008_2702-5613' '(at1g64660 : 400.0) Encodes a functional methionine gamma-lyase, a cytosolic enzyme catalyzes the degradation of methionine into methanethiol, alpha-ketobutyrate and ammonia. The catabolism of excess methionine is important to methionine homeostasis.; methionine gamma-lyase (MGL); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT3G01120.1); Has 19547 Blast hits to 19544 proteins in 2474 species: Archae - 216; Bacteria - 11847; Metazoa - 211; Fungi - 771; Plants - 270; Viruses - 0; Other Eukaryotes - 6232 (source: NCBI BLink). & (gnl|cdd|35276 : 215.0) no description available & (gnl|cdd|30971 : 205.0) no description available & (reliability: 800.0) & (original description: Putative cysA, Description = Methionine gamma-lyase, PFAM = PF01053)' T '13.2.3.4.1' 'amino acid metabolism.degradation.aspartate family.methionine.methionine gamma-lyase' 'niben101scf03894_295585-303493' '(at1g64660 : 625.0) Encodes a functional methionine gamma-lyase, a cytosolic enzyme catalyzes the degradation of methionine into methanethiol, alpha-ketobutyrate and ammonia. The catabolism of excess methionine is important to methionine homeostasis.; methionine gamma-lyase (MGL); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT3G01120.1); Has 19547 Blast hits to 19544 proteins in 2474 species: Archae - 216; Bacteria - 11847; Metazoa - 211; Fungi - 771; Plants - 270; Viruses - 0; Other Eukaryotes - 6232 (source: NCBI BLink). & (gnl|cdd|35276 : 336.0) no description available & (gnl|cdd|30971 : 300.0) no description available & (reliability: 1250.0) & (original description: Putative MGL, Description = Methionine gamma-lyase, PFAM = PF01053)' T '13.2.3.5' 'amino acid metabolism.degradation.aspartate family.lysine' 'niben101scf07304_234436-253784' '(at4g33150 : 1387.0) lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme; CONTAINS InterPro DOMAIN/s: Saccharopine dehydrogenase / Homospermidine synthase (InterPro:IPR005097); Has 1125 Blast hits to 1121 proteins in 331 species: Archae - 40; Bacteria - 296; Metazoa - 110; Fungi - 190; Plants - 55; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink). & (gnl|cdd|35393 : 416.0) no description available & (gnl|cdd|86318 : 224.0) no description available & (reliability: 2774.0) & (original description: Putative aass, Description = Alpha-aminoadipic semialdehyde synthase, PFAM = PF03435;PF16653;PF04455;PF05222)' T '13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'nbv0.3scaffold39231_10847-18596' '(at5g11950 : 299.0) Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At2G37210.; Putative lysine decarboxylase family protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86394 : 186.0) no description available & (reliability: 550.0) & (original description: Putative LOG8, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8, PFAM = PF03641)' T '13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'nbv0.3scaffold44264_9290-14704' '(at2g28305 : 316.0) LONELY GUY 1 (LOG1); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 5303 Blast hits to 5301 proteins in 1556 species: Archae - 26; Bacteria - 3660; Metazoa - 10; Fungi - 132; Plants - 396; Viruses - 0; Other Eukaryotes - 1079 (source: NCBI BLink). & (gnl|cdd|86394 : 190.0) no description available & (reliability: 600.0) & (original description: Putative LOG7, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7, PFAM = PF03641)' T '13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'nbv0.3scaffold65161_2353-8422' '(at3g53450 : 347.0) Putative lysine decarboxylase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lysine biosynthetic process via diaminopimelate; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 5287 Blast hits to 5285 proteins in 1551 species: Archae - 21; Bacteria - 3653; Metazoa - 10; Fungi - 132; Plants - 402; Viruses - 0; Other Eukaryotes - 1069 (source: NCBI BLink). & (gnl|cdd|86394 : 188.0) no description available & (reliability: 642.0) & (original description: Putative LOG3, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3, PFAM = PF03641)' T '13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'nbv0.5scaffold167_710367-719362' '(at2g37210 : 295.0) Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At5g11950.; lysine decarboxylase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: Putative lysine decarboxylase family protein (TAIR:AT3G53450.1). & (gnl|cdd|86394 : 159.0) no description available & (reliability: 558.0) & (original description: Putative LOG4, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase, PFAM = PF03641)' T '13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'nbv0.5scaffold1374_203069-220571' '(at2g28305 : 241.0) LONELY GUY 1 (LOG1); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 5303 Blast hits to 5301 proteins in 1556 species: Archae - 26; Bacteria - 3660; Metazoa - 10; Fungi - 132; Plants - 396; Viruses - 0; Other Eukaryotes - 1079 (source: NCBI BLink). & (gnl|cdd|86394 : 146.0) no description available & (reliability: 452.0) & (original description: Putative LOG, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase, PFAM = PF03641)' T '13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'niben044scf00005836ctg004_151-5436' '(at5g06300 : 213.0) Putative lysine decarboxylase family protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 5281 Blast hits to 5279 proteins in 1570 species: Archae - 23; Bacteria - 3686; Metazoa - 10; Fungi - 132; Plants - 400; Viruses - 0; Other Eukaryotes - 1030 (source: NCBI BLink). & (gnl|cdd|86394 : 146.0) no description available & (reliability: 426.0) & (original description: Putative log1, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase, PFAM = PF03641)' T '13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'niben044scf00007273ctg004_3807-7111' '(at3g53450 : 226.0) Putative lysine decarboxylase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lysine biosynthetic process via diaminopimelate; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 5287 Blast hits to 5285 proteins in 1551 species: Archae - 21; Bacteria - 3653; Metazoa - 10; Fungi - 132; Plants - 402; Viruses - 0; Other Eukaryotes - 1069 (source: NCBI BLink). & (gnl|cdd|86394 : 153.0) no description available & (reliability: 412.0) & (original description: Putative LOG1, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase, PFAM = PF03641)' T '13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'niben044scf00049482ctg002_983-6361' '(at2g28305 : 244.0) LONELY GUY 1 (LOG1); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 5303 Blast hits to 5301 proteins in 1556 species: Archae - 26; Bacteria - 3660; Metazoa - 10; Fungi - 132; Plants - 396; Viruses - 0; Other Eukaryotes - 1079 (source: NCBI BLink). & (gnl|cdd|86394 : 158.0) no description available & (reliability: 470.0) & (original description: Putative LOG, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase, PFAM = PF03641)' T '13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'niben101scf00152_2515946-2522425' '(at2g28305 : 313.0) LONELY GUY 1 (LOG1); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 5303 Blast hits to 5301 proteins in 1556 species: Archae - 26; Bacteria - 3660; Metazoa - 10; Fungi - 132; Plants - 396; Viruses - 0; Other Eukaryotes - 1079 (source: NCBI BLink). & (gnl|cdd|86394 : 191.0) no description available & (reliability: 592.0) & (original description: Putative LOG1, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1, PFAM = PF03641)' T '13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'niben101scf00508_264017-281757' '(at2g28305 : 338.0) LONELY GUY 1 (LOG1); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 5303 Blast hits to 5301 proteins in 1556 species: Archae - 26; Bacteria - 3660; Metazoa - 10; Fungi - 132; Plants - 396; Viruses - 0; Other Eukaryotes - 1079 (source: NCBI BLink). & (gnl|cdd|86394 : 176.0) no description available & (reliability: 636.0) & (original description: Putative LOG1, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1, PFAM = PF03641)' T '13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'niben101scf00508_264038-281817' '(at2g28305 : 338.0) LONELY GUY 1 (LOG1); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 5303 Blast hits to 5301 proteins in 1556 species: Archae - 26; Bacteria - 3660; Metazoa - 10; Fungi - 132; Plants - 396; Viruses - 0; Other Eukaryotes - 1079 (source: NCBI BLink). & (gnl|cdd|86394 : 178.0) no description available & (reliability: 642.0) & (original description: Putative LOG1, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1, PFAM = PF03641)' T '13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'niben101scf01394_281595-290002' '(at5g11950 : 294.0) Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At2G37210.; Putative lysine decarboxylase family protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86394 : 183.0) no description available & (reliability: 546.0) & (original description: Putative LDB2, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase, PFAM = PF03641)' T '13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'niben101scf03292_466653-469746' '(at3g53450 : 225.0) Putative lysine decarboxylase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lysine biosynthetic process via diaminopimelate; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 5287 Blast hits to 5285 proteins in 1551 species: Archae - 21; Bacteria - 3653; Metazoa - 10; Fungi - 132; Plants - 402; Viruses - 0; Other Eukaryotes - 1069 (source: NCBI BLink). & (gnl|cdd|86394 : 151.0) no description available & (reliability: 408.0) & (original description: Putative LOG1, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase, PFAM = PF03641)' T '13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'niben101scf04551_75863-82230' '(at1g50575 : 357.0) Putative lysine decarboxylase family protein; FUNCTIONS IN: carboxy-lyase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); Has 3310 Blast hits to 3310 proteins in 987 species: Archae - 6; Bacteria - 2367; Metazoa - 4; Fungi - 47; Plants - 208; Viruses - 0; Other Eukaryotes - 678 (source: NCBI BLink). & (gnl|cdd|86394 : 100.0) no description available & (reliability: 714.0) & (original description: Putative RCOM_0046330, Description = Carboxy-lyase, putative, PFAM = PF03641)' T '13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'niben101scf04717_331091-338517' '(at5g06300 : 359.0) Putative lysine decarboxylase family protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 5281 Blast hits to 5279 proteins in 1570 species: Archae - 23; Bacteria - 3686; Metazoa - 10; Fungi - 132; Plants - 400; Viruses - 0; Other Eukaryotes - 1030 (source: NCBI BLink). & (gnl|cdd|86394 : 189.0) no description available & (reliability: 718.0) & (original description: Putative LOG7, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7, PFAM = PF03641)' T '13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'niben101scf09962_13294-28079' '(at2g37210 : 310.0) Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At5g11950.; lysine decarboxylase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: Putative lysine decarboxylase family protein (TAIR:AT3G53450.1). & (gnl|cdd|86394 : 164.0) no description available & (reliability: 588.0) & (original description: Putative LOG3, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3, PFAM = PF03641)' T '13.2.3.5.1' 'mino acid metabolism.degradation.aspartate family.lysine.lysine decarboxylase' 'niben101scf12674_157015-162811' '(at5g06300 : 320.0) Putative lysine decarboxylase family protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 5281 Blast hits to 5279 proteins in 1570 species: Archae - 23; Bacteria - 3686; Metazoa - 10; Fungi - 132; Plants - 400; Viruses - 0; Other Eukaryotes - 1030 (source: NCBI BLink). & (gnl|cdd|86394 : 186.0) no description available & (reliability: 640.0) & (original description: Putative LOG7, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7, PFAM = PF03641)' T '13.2.3.5.1001' 'amino acid metabolism.degradation.aspartate family.lysine' 'glutarate' 'amino acid degradation.lysine, lipids' M '13.2.3.5.1002' 'amino acid metabolism.degradation.aspartate family.lysine' '2-aminoadipic acid' 'amino acid degradation.lysine' M '13.2.4' 'amino acid metabolism.degradation.branched chain group' '' '' '13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'nbv0.3scaffold16947_5520-33877' '(gnl|cdd|36396 : 603.0) no description available & (at1g21400 : 557.0) Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity; INVOLVED IN: metabolic process; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT5G09300.1); Has 9510 Blast hits to 9506 proteins in 1925 species: Archae - 124; Bacteria - 6142; Metazoa - 513; Fungi - 243; Plants - 187; Viruses - 0; Other Eukaryotes - 2301 (source: NCBI BLink). & (gnl|cdd|48163 : 365.0) no description available & (p52903|odpa_soltu : 122.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Solanum tuberosum (Potato) & (reliability: 1114.0) & (original description: Putative bkdA, Description = 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, PFAM = PF00676)' T '13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'nbv0.3scaffold53953_1-7599' '(gnl|cdd|36396 : 513.0) no description available & (at1g21400 : 499.0) Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity; INVOLVED IN: metabolic process; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT5G09300.1); Has 9510 Blast hits to 9506 proteins in 1925 species: Archae - 124; Bacteria - 6142; Metazoa - 513; Fungi - 243; Plants - 187; Viruses - 0; Other Eukaryotes - 2301 (source: NCBI BLink). & (gnl|cdd|48163 : 298.0) no description available & (p52902|odpa_pea : 99.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Pisum sativum (Garden pea) & (reliability: 998.0) & (original description: Putative bkdA, Description = 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, PFAM = PF00676;PF00676)' T '13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'nbv0.3scaffold61045_438-11344' '(at3g08860 : 756.0) Encodes a protein that is predicted to have beta-alanine aminotransferase activity.; PYRIMIDINE 4 (PYD4); FUNCTIONS IN: pyridoxal phosphate binding, transaminase activity, catalytic activity, alanine-glyoxylate transaminase activity; INVOLVED IN: cellular response to nitrogen levels; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: alanine:glyoxylate aminotransferase 3 (TAIR:AT2G38400.1); Has 35951 Blast hits to 35930 proteins in 2736 species: Archae - 736; Bacteria - 23081; Metazoa - 661; Fungi - 840; Plants - 399; Viruses - 17; Other Eukaryotes - 10217 (source: NCBI BLink). & (gnl|cdd|36618 : 620.0) no description available & (gnl|cdd|30509 : 435.0) no description available & (q6yze2|gsa_orysa : 85.1) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Oryza sativa (Rice) & (reliability: 1512.0) & (original description: Putative agxt2, Description = Alanine--glyoxylate aminotransferase 2, mitochondrial, PFAM = PF00202)' T '13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'nbv0.5scaffold1509_269302-277005' '(gnl|cdd|36396 : 533.0) no description available & (at1g21400 : 516.0) Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity; INVOLVED IN: metabolic process; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT5G09300.1); Has 9510 Blast hits to 9506 proteins in 1925 species: Archae - 124; Bacteria - 6142; Metazoa - 513; Fungi - 243; Plants - 187; Viruses - 0; Other Eukaryotes - 2301 (source: NCBI BLink). & (gnl|cdd|48163 : 317.0) no description available & (p52902|odpa_pea : 105.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Pisum sativum (Garden pea) & (reliability: 1032.0) & (original description: Putative bkdA, Description = 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, PFAM = PF00676;PF00676)' T '13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'nbv0.5scaffold1736_181467-188866' '(at5g09300 : 625.0) Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT1G21400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36396 : 611.0) no description available & (gnl|cdd|48163 : 377.0) no description available & (p52903|odpa_soltu : 148.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Solanum tuberosum (Potato) & (reliability: 1250.0) & (original description: Putative bkdA, Description = 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, PFAM = PF00676)' T '13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'nbv0.5scaffold3699_53635-61149' '(at2g33150 : 677.0) Encodes an organellar (peroxisome, glyoxysome) 3-ketoacyl-CoA thiolase, involved in fatty acid b-oxidation during germination and subsequent seedling growth. Mutants have defects in glyoxysomal fatty acid beta-oxidation. EC2.3.1.16 thiolase.; peroxisomal 3-ketoacyl-CoA thiolase 3 (PKT3); FUNCTIONS IN: acetyl-CoA C-acyltransferase activity; INVOLVED IN: fatty acid beta-oxidation, jasmonic acid biosynthetic process, response to wounding, fatty acid oxidation, glyoxysome organization; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: peroxisomal 3-ketoacyl-CoA thiolase 4 (TAIR:AT1G04710.1); Has 22382 Blast hits to 22371 proteins in 2261 species: Archae - 414; Bacteria - 14116; Metazoa - 985; Fungi - 655; Plants - 282; Viruses - 0; Other Eukaryotes - 5930 (source: NCBI BLink). & (gnl|cdd|36603 : 646.0) no description available & (gnl|cdd|29411 : 458.0) no description available & (reliability: 1354.0) & (original description: Putative KAT5, Description = 3-ketoacyl-CoA thiolase 5, peroxisomal, PFAM = PF00108;PF02803)' T '13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'niben101scf00155_51296-59629' '(gnl|cdd|35745 : 620.0) no description available & (at1g55510 : 595.0) branched-chain alpha-keto acid decarboxylase E1 beta; branched-chain alpha-keto acid decarboxylase E1 beta subunit (BCDH BETA1); FUNCTIONS IN: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity, catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: Transketolase family protein (TAIR:AT3G13450.1); Has 16577 Blast hits to 16568 proteins in 2706 species: Archae - 211; Bacteria - 10745; Metazoa - 523; Fungi - 224; Plants - 389; Viruses - 0; Other Eukaryotes - 4485 (source: NCBI BLink). & (gnl|cdd|30372 : 436.0) no description available & (p52904|odpb_pea : 183.0) Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) - Pisum sativum (Garden pea) & (reliability: 1190.0) & (original description: Putative DIN4, Description = 2-oxoisovalerate dehydrogenase subunit beta 2, mitochondrial, PFAM = PF02779;PF02780)' T '13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'niben101scf01641_97064-102189' '(gnl|cdd|36396 : 603.0) no description available & (at1g21400 : 592.0) Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity; INVOLVED IN: metabolic process; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT5G09300.1); Has 9510 Blast hits to 9506 proteins in 1925 species: Archae - 124; Bacteria - 6142; Metazoa - 513; Fungi - 243; Plants - 187; Viruses - 0; Other Eukaryotes - 2301 (source: NCBI BLink). & (gnl|cdd|48163 : 376.0) no description available & (p52903|odpa_soltu : 135.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Solanum tuberosum (Potato) & (reliability: 1184.0) & (original description: Putative bkdA, Description = 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, PFAM = PF00676)' T '13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'niben101scf01657_168345-183488' '(at5g09300 : 624.0) Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT1G21400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36396 : 613.0) no description available & (gnl|cdd|48163 : 378.0) no description available & (p52903|odpa_soltu : 148.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Solanum tuberosum (Potato) & (reliability: 1248.0) & (original description: Putative bkdA, Description = 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, PFAM = PF00676)' T '13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'niben101scf02011_955808-965886' '(gnl|cdd|36396 : 488.0) no description available & (at1g21400 : 464.0) Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity; INVOLVED IN: metabolic process; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT5G09300.1); Has 9510 Blast hits to 9506 proteins in 1925 species: Archae - 124; Bacteria - 6142; Metazoa - 513; Fungi - 243; Plants - 187; Viruses - 0; Other Eukaryotes - 2301 (source: NCBI BLink). & (gnl|cdd|48163 : 313.0) no description available & (p52902|odpa_pea : 106.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Pisum sativum (Garden pea) & (reliability: 928.0) & (original description: Putative bkdA, Description = 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, PFAM = PF00676;PF00676;PF00676;PF00676)' T '13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'niben101scf04523_54068-63860' '(at3g06850 : 543.0) dihydrolipoamide branched chain acyltransferase; BCE2; FUNCTIONS IN: acetyltransferase activity, dihydrolipoamide branched chain acyltransferase activity, alpha-ketoacid dehydrogenase activity, zinc ion binding; INVOLVED IN: response to light stimulus, response to sucrose stimulus; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089), Lipoamide Acyltransferase (InterPro:IPR015761); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2); Has 20964 Blast hits to 19078 proteins in 2320 species: Archae - 110; Bacteria - 11780; Metazoa - 568; Fungi - 442; Plants - 349; Viruses - 0; Other Eukaryotes - 7715 (source: NCBI BLink). & (gnl|cdd|35778 : 497.0) no description available & (gnl|cdd|84001 : 352.0) no description available & (reliability: 1086.0) & (original description: Putative bkdC, Description = Dihydrolipoyl transacylase, PFAM = PF00198;PF02817;PF00364)' T '13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'niben101scf06556_691241-699083' '(at3g06850 : 541.0) dihydrolipoamide branched chain acyltransferase; BCE2; FUNCTIONS IN: acetyltransferase activity, dihydrolipoamide branched chain acyltransferase activity, alpha-ketoacid dehydrogenase activity, zinc ion binding; INVOLVED IN: response to light stimulus, response to sucrose stimulus; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089), Lipoamide Acyltransferase (InterPro:IPR015761); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2); Has 20964 Blast hits to 19078 proteins in 2320 species: Archae - 110; Bacteria - 11780; Metazoa - 568; Fungi - 442; Plants - 349; Viruses - 0; Other Eukaryotes - 7715 (source: NCBI BLink). & (gnl|cdd|35778 : 493.0) no description available & (gnl|cdd|84001 : 351.0) no description available & (reliability: 1082.0) & (original description: Putative BCE2, Description = Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial, PFAM = PF00364;PF02817;PF00198)' T '13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'niben101scf09310_321861-334159' '(gnl|cdd|35745 : 618.0) no description available & (at1g55510 : 595.0) branched-chain alpha-keto acid decarboxylase E1 beta; branched-chain alpha-keto acid decarboxylase E1 beta subunit (BCDH BETA1); FUNCTIONS IN: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity, catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: Transketolase family protein (TAIR:AT3G13450.1); Has 16577 Blast hits to 16568 proteins in 2706 species: Archae - 211; Bacteria - 10745; Metazoa - 523; Fungi - 224; Plants - 389; Viruses - 0; Other Eukaryotes - 4485 (source: NCBI BLink). & (gnl|cdd|30372 : 439.0) no description available & (p52904|odpb_pea : 183.0) Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) - Pisum sativum (Garden pea) & (reliability: 1190.0) & (original description: Putative DIN4, Description = 2-oxoisovalerate dehydrogenase subunit beta 2, mitochondrial, PFAM = PF02779;PF02780)' T '13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'niben101scf09544_16266-28355' '(gnl|cdd|36396 : 598.0) no description available & (at1g21400 : 596.0) Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity; INVOLVED IN: metabolic process; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT5G09300.1); Has 9510 Blast hits to 9506 proteins in 1925 species: Archae - 124; Bacteria - 6142; Metazoa - 513; Fungi - 243; Plants - 187; Viruses - 0; Other Eukaryotes - 2301 (source: NCBI BLink). & (gnl|cdd|48163 : 367.0) no description available & (p52903|odpa_soltu : 133.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Solanum tuberosum (Potato) & (reliability: 1192.0) & (original description: Putative bkdA, Description = 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, PFAM = PF00676)' T '13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'niben101scf10189_275160-281650' '(at2g33150 : 742.0) Encodes an organellar (peroxisome, glyoxysome) 3-ketoacyl-CoA thiolase, involved in fatty acid b-oxidation during germination and subsequent seedling growth. Mutants have defects in glyoxysomal fatty acid beta-oxidation. EC2.3.1.16 thiolase.; peroxisomal 3-ketoacyl-CoA thiolase 3 (PKT3); FUNCTIONS IN: acetyl-CoA C-acyltransferase activity; INVOLVED IN: fatty acid beta-oxidation, jasmonic acid biosynthetic process, response to wounding, fatty acid oxidation, glyoxysome organization; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: peroxisomal 3-ketoacyl-CoA thiolase 4 (TAIR:AT1G04710.1); Has 22382 Blast hits to 22371 proteins in 2261 species: Archae - 414; Bacteria - 14116; Metazoa - 985; Fungi - 655; Plants - 282; Viruses - 0; Other Eukaryotes - 5930 (source: NCBI BLink). & (gnl|cdd|36603 : 672.0) no description available & (gnl|cdd|29411 : 474.0) no description available & (reliability: 1484.0) & (original description: Putative PED1, Description = 3-ketoacyl-CoA thiolase 2, peroxisomal, PFAM = PF02803;PF00108)' T '13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'niben101scf12528_15590-23004' '(at3g08860 : 752.0) Encodes a protein that is predicted to have beta-alanine aminotransferase activity.; PYRIMIDINE 4 (PYD4); FUNCTIONS IN: pyridoxal phosphate binding, transaminase activity, catalytic activity, alanine-glyoxylate transaminase activity; INVOLVED IN: cellular response to nitrogen levels; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: alanine:glyoxylate aminotransferase 3 (TAIR:AT2G38400.1); Has 35951 Blast hits to 35930 proteins in 2736 species: Archae - 736; Bacteria - 23081; Metazoa - 661; Fungi - 840; Plants - 399; Viruses - 17; Other Eukaryotes - 10217 (source: NCBI BLink). & (gnl|cdd|36618 : 623.0) no description available & (gnl|cdd|30509 : 432.0) no description available & (q39566|gsa_chlre : 84.3) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Chlamydomonas reinhardtii & (reliability: 1504.0) & (original description: Putative agxt2, Description = Alanine--glyoxylate aminotransferase 2, mitochondrial, PFAM = PF00202)' T '13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'niben101scf14910_38289-61557' '(gnl|cdd|36396 : 601.0) no description available & (at1g21400 : 557.0) Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity; INVOLVED IN: metabolic process; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT5G09300.1); Has 9510 Blast hits to 9506 proteins in 1925 species: Archae - 124; Bacteria - 6142; Metazoa - 513; Fungi - 243; Plants - 187; Viruses - 0; Other Eukaryotes - 2301 (source: NCBI BLink). & (gnl|cdd|48163 : 364.0) no description available & (p52903|odpa_soltu : 122.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Solanum tuberosum (Potato) & (reliability: 1114.0) & (original description: Putative bkdA, Description = 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, PFAM = PF00676)' T '13.2.4.1.7' 'amino acid metabolism.degradation.branched chain group.shared.methylglutaconyl-CoA hydratase' '' '' '13.2.4.2' 'amino acid metabolism.degradation.branched chain group.val ile' '' '' '13.2.4.3' 'amino acid metabolism.degradation.branched chain group.valine' 'nbv0.3scaffold24967_727-10418' '(at3g60510 : 496.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G31810.1). & (gnl|cdd|36897 : 442.0) no description available & (gnl|cdd|75599 : 265.0) no description available & (reliability: 938.0) & (original description: Putative At3g60510, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial, PFAM = PF16113)' T '13.2.4.3' 'amino acid metabolism.degradation.branched chain group.valine' 'nbv0.3scaffold41571_5179-13028' '(at2g14170 : 874.0) Arabidopsis thaliana methylmalonate-semialdehyde dehydrogenase; aldehyde dehydrogenase 6B2 (ALDH6B2); CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160), Methylmalonate-semialdehyde dehydrogenase (InterPro:IPR010061); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2C4 (TAIR:AT3G24503.1); Has 57527 Blast hits to 57240 proteins in 2927 species: Archae - 475; Bacteria - 33264; Metazoa - 2506; Fungi - 2072; Plants - 1211; Viruses - 0; Other Eukaryotes - 17999 (source: NCBI BLink). & (gnl|cdd|84580 : 466.0) no description available & (gnl|cdd|37661 : 294.0) no description available & (p17202|badh_spiol : 198.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1748.0) & (original description: Putative mmsA, Description = Methylmalonate-semialdehyde dehydrogenase, PFAM = PF00171)' T '13.2.4.3' 'amino acid metabolism.degradation.branched chain group.valine' 'nbv0.5scaffold392_393993-410921' '(at3g60510 : 488.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G31810.1). & (gnl|cdd|36897 : 429.0) no description available & (gnl|cdd|75599 : 282.0) no description available & (reliability: 908.0) & (original description: Putative At3g60510, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial, PFAM = PF16113)' T '13.2.4.3' 'amino acid metabolism.degradation.branched chain group.valine' 'nbv0.5scaffold1747_231606-241185' '(at3g60510 : 417.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G31810.1). & (gnl|cdd|36897 : 375.0) no description available & (gnl|cdd|75599 : 214.0) no description available & (reliability: 798.0) & (original description: Putative CHY1, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial, PFAM = PF16113;PF16113;PF16113)' T '13.2.4.3' 'amino acid metabolism.degradation.branched chain group.valine' 'nbv0.5scaffold2265_55010-63257' '(at2g14170 : 812.0) Arabidopsis thaliana methylmalonate-semialdehyde dehydrogenase; aldehyde dehydrogenase 6B2 (ALDH6B2); CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160), Methylmalonate-semialdehyde dehydrogenase (InterPro:IPR010061); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2C4 (TAIR:AT3G24503.1); Has 57527 Blast hits to 57240 proteins in 2927 species: Archae - 475; Bacteria - 33264; Metazoa - 2506; Fungi - 2072; Plants - 1211; Viruses - 0; Other Eukaryotes - 17999 (source: NCBI BLink). & (gnl|cdd|84580 : 433.0) no description available & (gnl|cdd|37661 : 273.0) no description available & (p17202|badh_spiol : 182.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1624.0) & (original description: Putative mmsA, Description = Methylmalonate-semialdehyde dehydrogenase, PFAM = PF00171)' T '13.2.4.3' 'amino acid metabolism.degradation.branched chain group.valine' 'nbv0.5scaffold3845_176346-192566' '(at4g31810 : 571.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: fatty acid beta-oxidation, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT3G60510.1); Has 22679 Blast hits to 22670 proteins in 1880 species: Archae - 357; Bacteria - 15693; Metazoa - 1078; Fungi - 640; Plants - 575; Viruses - 0; Other Eukaryotes - 4336 (source: NCBI BLink). & (gnl|cdd|36897 : 445.0) no description available & (gnl|cdd|75599 : 262.0) no description available & (reliability: 1142.0) & (original description: Putative At4g31810, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial, PFAM = PF16113)' T '13.2.4.3' 'amino acid metabolism.degradation.branched chain group.valine' 'niben044scf00053207ctg002_668-9359' '(at4g31810 : 374.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: fatty acid beta-oxidation, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT3G60510.1); Has 22679 Blast hits to 22670 proteins in 1880 species: Archae - 357; Bacteria - 15693; Metazoa - 1078; Fungi - 640; Plants - 575; Viruses - 0; Other Eukaryotes - 4336 (source: NCBI BLink). & (gnl|cdd|36897 : 278.0) no description available & (gnl|cdd|76257 : 158.0) no description available & (reliability: 748.0) & (original description: Putative BnaCnng76550D, Description = BnaCnng76550D protein, PFAM = PF16113)' T '13.2.4.3' 'amino acid metabolism.degradation.branched chain group.valine' 'niben101scf00062_165858-175026' '(at2g14170 : 864.0) Arabidopsis thaliana methylmalonate-semialdehyde dehydrogenase; aldehyde dehydrogenase 6B2 (ALDH6B2); CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160), Methylmalonate-semialdehyde dehydrogenase (InterPro:IPR010061); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2C4 (TAIR:AT3G24503.1); Has 57527 Blast hits to 57240 proteins in 2927 species: Archae - 475; Bacteria - 33264; Metazoa - 2506; Fungi - 2072; Plants - 1211; Viruses - 0; Other Eukaryotes - 17999 (source: NCBI BLink). & (gnl|cdd|84580 : 467.0) no description available & (gnl|cdd|37661 : 295.0) no description available & (p17202|badh_spiol : 198.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1728.0) & (original description: Putative mmsA, Description = Methylmalonate-semialdehyde dehydrogenase, PFAM = PF00171)' T '13.2.4.3' 'amino acid metabolism.degradation.branched chain group.valine' 'niben101scf00878_315242-326183' '(at3g60510 : 484.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G31810.1). & (gnl|cdd|36897 : 430.0) no description available & (gnl|cdd|75599 : 254.0) no description available & (reliability: 914.0) & (original description: Putative At3g60510, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial, PFAM = PF16113;PF16113)' T '13.2.4.3' 'amino acid metabolism.degradation.branched chain group.valine' 'niben101scf05011_153544-170214' '(at4g31810 : 537.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: fatty acid beta-oxidation, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT3G60510.1); Has 22679 Blast hits to 22670 proteins in 1880 species: Archae - 357; Bacteria - 15693; Metazoa - 1078; Fungi - 640; Plants - 575; Viruses - 0; Other Eukaryotes - 4336 (source: NCBI BLink). & (gnl|cdd|36897 : 409.0) no description available & (gnl|cdd|75599 : 232.0) no description available & (reliability: 1074.0) & (original description: Putative At4g31810, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial, PFAM = PF16113)' T '13.2.4.3' 'amino acid metabolism.degradation.branched chain group.valine' 'niben101scf07414_235974-244952' '(at4g20930 : 449.0) 6-phosphogluconate dehydrogenase family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, valine metabolic process, valine catabolic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyisobutyrate dehydrogenase (InterPro:IPR011548), 3-hydroxyisobutyrate dehydrogenase-related, conserved site (InterPro:IPR002204); BEST Arabidopsis thaliana protein match is: glyoxylate reductase 2 (TAIR:AT1G17650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35630 : 326.0) no description available & (gnl|cdd|32267 : 260.0) no description available & (reliability: 898.0) & (original description: Putative hibA, Description = 3-hydroxyisobutyrate dehydrogenase, PFAM = PF14833;PF03446)' T '13.2.4.4' 'amino acid metabolism.degradation.branched chain group.leucine' 'nbv0.5scaffold1017_459807-472622' '(at2g26800 : 504.0) Aldolase superfamily protein; FUNCTIONS IN: hydroxymethylglutaryl-CoA lyase activity, catalytic activity; INVOLVED IN: leucine metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Pyruvate carboxyltransferase (InterPro:IPR000891); Has 2834 Blast hits to 2828 proteins in 876 species: Archae - 8; Bacteria - 1833; Metazoa - 220; Fungi - 120; Plants - 70; Viruses - 0; Other Eukaryotes - 583 (source: NCBI BLink). & (gnl|cdd|37579 : 485.0) no description available & (gnl|cdd|81700 : 445.0) no description available & (reliability: 1008.0) & (original description: Putative Hmgcl, Description = Hydroxymethylglutaryl-CoA lyase, mitochondrial, PFAM = PF00682)' T '13.2.4.4' 'amino acid metabolism.degradation.branched chain group.leucine' 'niben044scf00018934ctg016_80-5958' '(at4g34030 : 744.0) MCC-B is involved in leucine degradation in mitochondria. The active protein is a dimer of MCC-A and MCC-B. MCC-A is biotinylated whereas MCC-B is not.; 3-methylcrotonyl-CoA carboxylase (MCCB); FUNCTIONS IN: biotin carboxylase activity, cobalt ion binding, methylcrotonoyl-CoA carboxylase activity, zinc ion binding; INVOLVED IN: leucine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-coenzyme A carboxyltransferase, N-terminal (InterPro:IPR011762), Carboxyl transferase (InterPro:IPR000022), Acetyl-coenzyme A carboxyltransferase, C-terminal (InterPro:IPR011763); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35760 : 618.0) no description available & (gnl|cdd|34408 : 532.0) no description available & (reliability: 1488.0) & (original description: Putative MCCB, Description = Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial, PFAM = PF01039)' T '13.2.4.4' 'amino acid metabolism.degradation.branched chain group.leucine' 'niben044scf00026050ctg006_537-2495' '(at2g26800 : 108.0) Aldolase superfamily protein; FUNCTIONS IN: hydroxymethylglutaryl-CoA lyase activity, catalytic activity; INVOLVED IN: leucine metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Pyruvate carboxyltransferase (InterPro:IPR000891); Has 2834 Blast hits to 2828 proteins in 876 species: Archae - 8; Bacteria - 1833; Metazoa - 220; Fungi - 120; Plants - 70; Viruses - 0; Other Eukaryotes - 583 (source: NCBI BLink). & (gnl|cdd|37579 : 105.0) no description available & (gnl|cdd|81700 : 100.0) no description available & (reliability: 216.0) & (original description: Putative hmgL, Description = Hydroxymethylglutaryl-CoA lyase, PFAM = )' T '13.2.4.4' 'amino acid metabolism.degradation.branched chain group.leucine' 'niben101scf02631_155897-165336' '(at4g34030 : 867.0) MCC-B is involved in leucine degradation in mitochondria. The active protein is a dimer of MCC-A and MCC-B. MCC-A is biotinylated whereas MCC-B is not.; 3-methylcrotonyl-CoA carboxylase (MCCB); FUNCTIONS IN: biotin carboxylase activity, cobalt ion binding, methylcrotonoyl-CoA carboxylase activity, zinc ion binding; INVOLVED IN: leucine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-coenzyme A carboxyltransferase, N-terminal (InterPro:IPR011762), Carboxyl transferase (InterPro:IPR000022), Acetyl-coenzyme A carboxyltransferase, C-terminal (InterPro:IPR011763); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35760 : 700.0) no description available & (gnl|cdd|34408 : 600.0) no description available & (reliability: 1734.0) & (original description: Putative MCCB, Description = Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial, PFAM = PF01039)' T '13.2.4.4' 'amino acid metabolism.degradation.branched chain group.leucine' 'niben101scf02829_616159-640412' '(q42777|mcca_soybn : 1052.0) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) - Glycine max (Soybean) & (at1g03090 : 1040.0) MCCA is the biotinylated subunit of the dimer MCCase, which is involved in leucine degradation. Both subunits are nuclear coded and the active enzyme is located in the mitochondrion.; MCCA; FUNCTIONS IN: cobalt ion binding, methylcrotonoyl-CoA carboxylase activity; INVOLVED IN: leucine catabolic process; LOCATED IN: mitochondrion, cytosolic ribosome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089), Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), PreATP-grasp-like fold (InterPro:IPR016185), Biotin-binding site (InterPro:IPR001882), Biotin carboxylation domain (InterPro:IPR011764), Biotin carboxylase, C-terminal (InterPro:IPR005482), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Rudiment single hybrid motif (InterPro:IPR011054), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl Co-enzyme a carboxylase biotin carboxylase subunit (TAIR:AT5G35360.1); Has 41492 Blast hits to 34824 proteins in 3674 species: Archae - 718; Bacteria - 26555; Metazoa - 1797; Fungi - 1117; Plants - 802; Viruses - 0; Other Eukaryotes - 10503 (source: NCBI BLink). & (gnl|cdd|35459 : 844.0) no description available & (gnl|cdd|34383 : 774.0) no description available & (reliability: 2080.0) & (original description: Putative MCCA, Description = Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial, PFAM = PF02786;PF02785;PF00364;PF00289)' T '13.2.4.4' 'amino acid metabolism.degradation.branched chain group.leucine' 'niben101scf05201_235413-242292' '(at2g26800 : 551.0) Aldolase superfamily protein; FUNCTIONS IN: hydroxymethylglutaryl-CoA lyase activity, catalytic activity; INVOLVED IN: leucine metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Pyruvate carboxyltransferase (InterPro:IPR000891); Has 2834 Blast hits to 2828 proteins in 876 species: Archae - 8; Bacteria - 1833; Metazoa - 220; Fungi - 120; Plants - 70; Viruses - 0; Other Eukaryotes - 583 (source: NCBI BLink). & (gnl|cdd|37579 : 469.0) no description available & (gnl|cdd|81700 : 431.0) no description available & (reliability: 1102.0) & (original description: Putative HMGCL, Description = Hydroxymethylglutaryl-CoA lyase, mitochondrial, PFAM = PF00682)' T '13.2.4.4' 'amino acid metabolism.degradation.branched chain group.leucine' 'niben101scf07350_51125-58964' '(q9fs88|ivd1_soltu : 791.0) Isovaleryl-CoA dehydrogenase 1, mitochondrial precursor (EC 1.3.99.10) (IVD 1) - Solanum tuberosum (Potato) & (at3g45300 : 674.0) Encodes isovaleryl-coenzyme a dehydrogenase. Mutants have increases in 12 seed free amino acids, accumulation of seed homomethionine and 3-isovaleroyloxypropyl-glucosinolate, with a concomitant decrease in seed 3-benzoyloxypropyl-glucosinolate.; isovaleryl-CoA-dehydrogenase (IVD); FUNCTIONS IN: isovaleryl-CoA dehydrogenase activity, ATP binding; INVOLVED IN: leucine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA dehydrogenase, conserved site (InterPro:IPR006089), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075), Acyl-CoA dehydrogenase, N-terminal (InterPro:IPR006092); BEST Arabidopsis thaliana protein match is: acyl-CoA oxidase 4 (TAIR:AT3G51840.1); Has 45583 Blast hits to 45129 proteins in 2067 species: Archae - 559; Bacteria - 29477; Metazoa - 1687; Fungi - 835; Plants - 308; Viruses - 0; Other Eukaryotes - 12717 (source: NCBI BLink). & (gnl|cdd|29656 : 641.0) no description available & (gnl|cdd|35363 : 620.0) no description available & (reliability: 1348.0) & (original description: Putative 2MBCD, Description = 2-methylacyl-CoA dehydrogenase, mitochondrial, PFAM = PF02771;PF00441;PF02770)' T '13.2.4.4' 'amino acid metabolism.degradation.branched chain group.leucine' 'niben101scf12320_25777-32023' '(at2g26800 : 550.0) Aldolase superfamily protein; FUNCTIONS IN: hydroxymethylglutaryl-CoA lyase activity, catalytic activity; INVOLVED IN: leucine metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Pyruvate carboxyltransferase (InterPro:IPR000891); Has 2834 Blast hits to 2828 proteins in 876 species: Archae - 8; Bacteria - 1833; Metazoa - 220; Fungi - 120; Plants - 70; Viruses - 0; Other Eukaryotes - 583 (source: NCBI BLink). & (gnl|cdd|37579 : 467.0) no description available & (gnl|cdd|81700 : 428.0) no description available & (reliability: 1100.0) & (original description: Putative HMGCL, Description = Hydroxymethylglutaryl-CoA lyase, mitochondrial, PFAM = PF00682)' T '13.2.4.4' 'amino acid metabolism.degradation.branched chain group.leucine' 'niben101scf15836_51841-67152' '(q9fs87|ivd2_soltu : 750.0) Isovaleryl-CoA dehydrogenase 2, mitochondrial precursor (EC 1.3.99.10) (IVD 2) (Fragment) - Solanum tuberosum (Potato) & (at3g45300 : 672.0) Encodes isovaleryl-coenzyme a dehydrogenase. Mutants have increases in 12 seed free amino acids, accumulation of seed homomethionine and 3-isovaleroyloxypropyl-glucosinolate, with a concomitant decrease in seed 3-benzoyloxypropyl-glucosinolate.; isovaleryl-CoA-dehydrogenase (IVD); FUNCTIONS IN: isovaleryl-CoA dehydrogenase activity, ATP binding; INVOLVED IN: leucine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA dehydrogenase, conserved site (InterPro:IPR006089), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075), Acyl-CoA dehydrogenase, N-terminal (InterPro:IPR006092); BEST Arabidopsis thaliana protein match is: acyl-CoA oxidase 4 (TAIR:AT3G51840.1); Has 45583 Blast hits to 45129 proteins in 2067 species: Archae - 559; Bacteria - 29477; Metazoa - 1687; Fungi - 835; Plants - 308; Viruses - 0; Other Eukaryotes - 12717 (source: NCBI BLink). & (gnl|cdd|29656 : 653.0) no description available & (gnl|cdd|35363 : 634.0) no description available & (reliability: 1344.0) & (original description: Putative IVD, Description = Isovaleryl-CoA dehydrogenase, mitochondrial, PFAM = PF02771;PF00441;PF02770)' T '13.2.4.4.6' 'amino acid metabolism.degradation.branched chain group.leucine.methylcrotonoyl-CoA carboxylase' '' '' '13.2.4.4.8' 'amino acid metabolism.degradation.branched chain group.leucine.hydroxymethylglutaryl-CoA lyase' '' '' '13.2.4.5' 'amino acid metabolism.degradation.branched chain group.isoleucine' 'nbv0.5scaffold3699_53635-61149' '(at2g33150 : 677.0) Encodes an organellar (peroxisome, glyoxysome) 3-ketoacyl-CoA thiolase, involved in fatty acid b-oxidation during germination and subsequent seedling growth. Mutants have defects in glyoxysomal fatty acid beta-oxidation. EC2.3.1.16 thiolase.; peroxisomal 3-ketoacyl-CoA thiolase 3 (PKT3); FUNCTIONS IN: acetyl-CoA C-acyltransferase activity; INVOLVED IN: fatty acid beta-oxidation, jasmonic acid biosynthetic process, response to wounding, fatty acid oxidation, glyoxysome organization; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: peroxisomal 3-ketoacyl-CoA thiolase 4 (TAIR:AT1G04710.1); Has 22382 Blast hits to 22371 proteins in 2261 species: Archae - 414; Bacteria - 14116; Metazoa - 985; Fungi - 655; Plants - 282; Viruses - 0; Other Eukaryotes - 5930 (source: NCBI BLink). & (gnl|cdd|36603 : 646.0) no description available & (gnl|cdd|29411 : 458.0) no description available & (reliability: 1240.0) & (original description: Putative KAT5, Description = 3-ketoacyl-CoA thiolase 5, peroxisomal, PFAM = PF00108;PF02803)' T '13.2.4.5' 'amino acid metabolism.degradation.branched chain group.isoleucine' 'niben101scf04727_328978-336149' '(at5g48230 : 553.0) acetoacetyl-CoA thiolase 2 (ACAT2); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acetyl-CoA C-acetyltransferase activity, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: peroxisome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: Thiolase family protein (TAIR:AT5G47720.4); Has 23891 Blast hits to 23860 proteins in 2352 species: Archae - 483; Bacteria - 15387; Metazoa - 1000; Fungi - 680; Plants - 248; Viruses - 0; Other Eukaryotes - 6093 (source: NCBI BLink). & (gnl|cdd|36604 : 541.0) no description available & (gnl|cdd|29411 : 455.0) no description available & (reliability: 1090.0) & (original description: Putative atoB, Description = Acetyl-CoA C-acetyltransferase, PFAM = PF00108;PF02803)' T '13.2.4.5' 'amino acid metabolism.degradation.branched chain group.isoleucine' 'niben101scf05433_32179-39133' '(at5g48230 : 577.0) acetoacetyl-CoA thiolase 2 (ACAT2); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acetyl-CoA C-acetyltransferase activity, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: peroxisome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: Thiolase family protein (TAIR:AT5G47720.4); Has 23891 Blast hits to 23860 proteins in 2352 species: Archae - 483; Bacteria - 15387; Metazoa - 1000; Fungi - 680; Plants - 248; Viruses - 0; Other Eukaryotes - 6093 (source: NCBI BLink). & (gnl|cdd|36604 : 549.0) no description available & (gnl|cdd|29411 : 461.0) no description available & (reliability: 1110.0) & (original description: Putative AAT1, Description = Acetyl-CoA acetyltransferase, cytosolic 1, PFAM = PF02803;PF00108)' T '13.2.4.5' 'amino acid metabolism.degradation.branched chain group.isoleucine' 'niben101scf06423_199340-207955' '(at5g47720 : 599.0) Thiolase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acetyl-CoA C-acetyltransferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039); BEST Arabidopsis thaliana protein match is: acetoacetyl-CoA thiolase 2 (TAIR:AT5G48230.2); Has 23291 Blast hits to 23276 proteins in 2315 species: Archae - 454; Bacteria - 14875; Metazoa - 988; Fungi - 698; Plants - 252; Viruses - 0; Other Eukaryotes - 6024 (source: NCBI BLink). & (gnl|cdd|36604 : 547.0) no description available & (gnl|cdd|29411 : 460.0) no description available & (reliability: 1198.0) & (original description: Putative atoB, Description = Acetyl-CoA acetyltransferase, PFAM = PF02803;PF00108)' T '13.2.4.99' 'amino acid metabolism.degradation.branched chain group.unspecified' '' '' '13.2.5' 'amino acid metabolism.degradation.serine-glycine-cysteine group' '' '' '13.2.5.1' 'amino acid metabolism.degradation.serine-glycine-cysteine group.serine' '' '' '13.2.5.1.1001' 'amino acid metabolism.degradation.serine-glycine-cysteine group.serine' 'glycerate' 'PS.photorepiration; lipid metabolism; amino acid degradation.serine; amino acid degradation.glycine; gluconeogenese/ glyoxylate cycle; TCA / org transformation' M '13.2.5.2' 'amino acid metabolism.degradation.serine-glycine-cysteine group.glycine' 'nbv0.5scaffold5315_44745-57523' '(at1g72190 : 303.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: homoserine biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT4G34200.1); Has 28327 Blast hits to 28320 proteins in 2696 species: Archae - 466; Bacteria - 17634; Metazoa - 719; Fungi - 1167; Plants - 499; Viruses - 5; Other Eukaryotes - 7837 (source: NCBI BLink). & (gnl|cdd|35292 : 134.0) no description available & (gnl|cdd|84741 : 122.0) no description available & (reliability: 606.0) & (original description: Putative 20, Description = D-isomer specific 2-hydroxyacid dehydrogenase family protein isoform 3, PFAM = PF02826;PF00389)' T '13.2.5.2' 'amino acid metabolism.degradation.serine-glycine-cysteine group.glycine' 'niben044scf00007921ctg008_2562-8575' '(at1g72190 : 267.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: homoserine biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT4G34200.1); Has 28327 Blast hits to 28320 proteins in 2696 species: Archae - 466; Bacteria - 17634; Metazoa - 719; Fungi - 1167; Plants - 499; Viruses - 5; Other Eukaryotes - 7837 (source: NCBI BLink). & (gnl|cdd|35292 : 140.0) no description available & (gnl|cdd|84741 : 136.0) no description available & (reliability: 534.0) & (original description: Putative 20, Description = D-isomer specific 2-hydroxyacid dehydrogenase family protein isoform 3, PFAM = PF00389;PF02826)' T '13.2.5.2' 'amino acid metabolism.degradation.serine-glycine-cysteine group.glycine' 'niben044scf00013023ctg008_22232-26386' '(p54260|gcst_soltu : 819.0) Aminomethyltransferase, mitochondrial precursor (EC 2.1.2.10) (Glycine cleavage system T protein) (GCVT) - Solanum tuberosum (Potato) & (at1g11860 : 740.0) Glycine cleavage T-protein family; FUNCTIONS IN: aminomethyltransferase activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycine cleavage system T protein (InterPro:IPR006223), Glycine cleavage T-protein, N-terminal (InterPro:IPR006222), Glycine cleavage T-protein, C-terminal barrel (InterPro:IPR013977); BEST Arabidopsis thaliana protein match is: Glycine cleavage T-protein family (TAIR:AT1G60990.3). & (gnl|cdd|37981 : 530.0) no description available & (gnl|cdd|30753 : 345.0) no description available & (reliability: 1480.0) & (original description: Putative GDCST, Description = Aminomethyltransferase, mitochondrial, PFAM = PF08669;PF01571)' T '13.2.5.2' 'amino acid metabolism.degradation.serine-glycine-cysteine group.glycine' 'niben101scf01718_101438-107286' '(at1g68010 : 669.0) Encodes hydroxypyruvate reductase.; hydroxypyruvate reductase (HPR); CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT3G19480.1). & (p13443|dhgy_cucsa : 660.0) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (gnl|cdd|35292 : 288.0) no description available & (gnl|cdd|84741 : 249.0) no description available & (reliability: 1338.0) & (original description: Putative HPR, Description = Glycerate dehydrogenase HPR, peroxisomal, PFAM = PF00389;PF02826;PF02826)' T '13.2.5.2' 'amino acid metabolism.degradation.serine-glycine-cysteine group.glycine' 'niben101scf02145_1055454-1060904' '(p54260|gcst_soltu : 825.0) Aminomethyltransferase, mitochondrial precursor (EC 2.1.2.10) (Glycine cleavage system T protein) (GCVT) - Solanum tuberosum (Potato) & (at1g11860 : 743.0) Glycine cleavage T-protein family; FUNCTIONS IN: aminomethyltransferase activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycine cleavage system T protein (InterPro:IPR006223), Glycine cleavage T-protein, N-terminal (InterPro:IPR006222), Glycine cleavage T-protein, C-terminal barrel (InterPro:IPR013977); BEST Arabidopsis thaliana protein match is: Glycine cleavage T-protein family (TAIR:AT1G60990.3). & (gnl|cdd|37981 : 531.0) no description available & (gnl|cdd|30753 : 345.0) no description available & (reliability: 1486.0) & (original description: Putative GDCST, Description = Aminomethyltransferase, mitochondrial, PFAM = PF01571;PF08669)' T '13.2.5.2' 'amino acid metabolism.degradation.serine-glycine-cysteine group.glycine' 'niben101scf03121_405670-431276' '(at1g72190 : 445.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: homoserine biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT4G34200.1); Has 28327 Blast hits to 28320 proteins in 2696 species: Archae - 466; Bacteria - 17634; Metazoa - 719; Fungi - 1167; Plants - 499; Viruses - 5; Other Eukaryotes - 7837 (source: NCBI BLink). & (gnl|cdd|35292 : 239.0) no description available & (gnl|cdd|84741 : 214.0) no description available & (q9sxp2|fdh1_orysa : 95.9) Formate dehydrogenase 1, mitochondrial precursor (EC 1.2.1.2) (NAD-dependent formate dehydrogenase 1) (FDH 1) - Oryza sativa (Rice) & (reliability: 890.0) & (original description: Putative 20, Description = Erythronate-4-phosphate+dehydrogenase+domain+containing+protein, PFAM = PF02826;PF00389)' T '13.2.5.2' 'amino acid metabolism.degradation.serine-glycine-cysteine group.glycine' 'niben101scf03435_121212-127389' '(at1g08630 : 519.0) Encodes a threonine aldolase, involved in threonine degradation to glycine. Primarily expressed in seeds and seedlings.; threonine aldolase 1 (THA1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aromatic amino acid beta-eliminating lyase/threonine aldolase (InterPro:IPR001597), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: threonine aldolase 2 (TAIR:AT3G04520.2); Has 3797 Blast hits to 3793 proteins in 1149 species: Archae - 25; Bacteria - 2286; Metazoa - 91; Fungi - 253; Plants - 87; Viruses - 0; Other Eukaryotes - 1055 (source: NCBI BLink). & (gnl|cdd|36582 : 486.0) no description available & (gnl|cdd|85309 : 331.0) no description available & (reliability: 1038.0) & (original description: Putative THA1, Description = Probable low-specificity L-threonine aldolase 1, PFAM = PF01212)' T '13.2.5.2' 'amino acid metabolism.degradation.serine-glycine-cysteine group.glycine' 'niben101scf06809_165015-177590' '(at1g68010 : 683.0) Encodes hydroxypyruvate reductase.; hydroxypyruvate reductase (HPR); CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT3G19480.1). & (p13443|dhgy_cucsa : 675.0) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (gnl|cdd|35292 : 291.0) no description available & (gnl|cdd|84741 : 254.0) no description available & (reliability: 1366.0) & (original description: Putative HPR, Description = Glycerate dehydrogenase HPR, peroxisomal, PFAM = PF00389;PF02826)' T '13.2.5.2' 'amino acid metabolism.degradation.serine-glycine-cysteine group.glycine' 'niben101scf09658_75866-82652' '(at1g08630 : 520.0) Encodes a threonine aldolase, involved in threonine degradation to glycine. Primarily expressed in seeds and seedlings.; threonine aldolase 1 (THA1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aromatic amino acid beta-eliminating lyase/threonine aldolase (InterPro:IPR001597), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: threonine aldolase 2 (TAIR:AT3G04520.2); Has 3797 Blast hits to 3793 proteins in 1149 species: Archae - 25; Bacteria - 2286; Metazoa - 91; Fungi - 253; Plants - 87; Viruses - 0; Other Eukaryotes - 1055 (source: NCBI BLink). & (gnl|cdd|36582 : 484.0) no description available & (gnl|cdd|85309 : 333.0) no description available & (reliability: 1040.0) & (original description: Putative THA1, Description = Probable low-specificity L-threonine aldolase 1, PFAM = PF01212)' T '13.2.5.2.11' 'amino acid metabolism.degradation.serine-glycine-cysteine group.glycine.threonine aldolase' '' '' '13.2.5.3' 'amino acid metabolism.degradation.serine-glycine-cysteine group.cysteine' 'nbv0.5scaffold105_1192868-1198537' '(at1g79230 : 350.0) encodes a sulfurtransferase/rhodaneses, which belongs to a group of enzymes widely distributed in all three phyla that catalyze the transfer of sulfur from a donor to a thiophilic acceptor substrate. The protein and transcript levels are NOT affected by senescence or exogenous cyanide, suggesting that sulfurtransferases are involved in cyanide detoxification.; mercaptopyruvate sulfurtransferase 1 (MST1); FUNCTIONS IN: 3-mercaptopyruvate sulfurtransferase activity, sulfurtransferase activity, thiosulfate sulfurtransferase activity; INVOLVED IN: sulfate transport, aging; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Thiosulphate sulfurtransferase, conserved site (InterPro:IPR001307); BEST Arabidopsis thaliana protein match is: rhodanese homologue 2 (TAIR:AT1G16460.2); Has 6251 Blast hits to 6226 proteins in 1459 species: Archae - 162; Bacteria - 3623; Metazoa - 283; Fungi - 152; Plants - 95; Viruses - 0; Other Eukaryotes - 1936 (source: NCBI BLink). & (gnl|cdd|36742 : 188.0) no description available & (gnl|cdd|29079 : 164.0) no description available & (reliability: 700.0) & (original description: Putative mst, Description = Sulfurtransferase, PFAM = PF00581)' T '13.2.5.3' 'amino acid metabolism.degradation.serine-glycine-cysteine group.cysteine' 'nbv0.5scaffold2213_303762-320769' '(at1g79230 : 541.0) encodes a sulfurtransferase/rhodaneses, which belongs to a group of enzymes widely distributed in all three phyla that catalyze the transfer of sulfur from a donor to a thiophilic acceptor substrate. The protein and transcript levels are NOT affected by senescence or exogenous cyanide, suggesting that sulfurtransferases are involved in cyanide detoxification.; mercaptopyruvate sulfurtransferase 1 (MST1); FUNCTIONS IN: 3-mercaptopyruvate sulfurtransferase activity, sulfurtransferase activity, thiosulfate sulfurtransferase activity; INVOLVED IN: sulfate transport, aging; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Thiosulphate sulfurtransferase, conserved site (InterPro:IPR001307); BEST Arabidopsis thaliana protein match is: rhodanese homologue 2 (TAIR:AT1G16460.2); Has 6251 Blast hits to 6226 proteins in 1459 species: Archae - 162; Bacteria - 3623; Metazoa - 283; Fungi - 152; Plants - 95; Viruses - 0; Other Eukaryotes - 1936 (source: NCBI BLink). & (gnl|cdd|36742 : 326.0) no description available & (gnl|cdd|32722 : 288.0) no description available & (reliability: 1082.0) & (original description: Putative sseA, Description = Sulfurtransferase, PFAM = PF00581;PF00581)' T '13.2.5.3' 'amino acid metabolism.degradation.serine-glycine-cysteine group.cysteine' 'nbv0.5scaffold6853_83221-88899' '(at1g79230 : 213.0) encodes a sulfurtransferase/rhodaneses, which belongs to a group of enzymes widely distributed in all three phyla that catalyze the transfer of sulfur from a donor to a thiophilic acceptor substrate. The protein and transcript levels are NOT affected by senescence or exogenous cyanide, suggesting that sulfurtransferases are involved in cyanide detoxification.; mercaptopyruvate sulfurtransferase 1 (MST1); FUNCTIONS IN: 3-mercaptopyruvate sulfurtransferase activity, sulfurtransferase activity, thiosulfate sulfurtransferase activity; INVOLVED IN: sulfate transport, aging; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Thiosulphate sulfurtransferase, conserved site (InterPro:IPR001307); BEST Arabidopsis thaliana protein match is: rhodanese homologue 2 (TAIR:AT1G16460.2); Has 6251 Blast hits to 6226 proteins in 1459 species: Archae - 162; Bacteria - 3623; Metazoa - 283; Fungi - 152; Plants - 95; Viruses - 0; Other Eukaryotes - 1936 (source: NCBI BLink). & (gnl|cdd|29080 : 156.0) no description available & (gnl|cdd|36742 : 148.0) no description available & (reliability: 426.0) & (original description: Putative mst, Description = Sulfurtransferase, PFAM = PF00581)' T '13.2.5.3' 'amino acid metabolism.degradation.serine-glycine-cysteine group.cysteine' 'niben101scf05295_582319-599333' '(at1g79230 : 545.0) encodes a sulfurtransferase/rhodaneses, which belongs to a group of enzymes widely distributed in all three phyla that catalyze the transfer of sulfur from a donor to a thiophilic acceptor substrate. The protein and transcript levels are NOT affected by senescence or exogenous cyanide, suggesting that sulfurtransferases are involved in cyanide detoxification.; mercaptopyruvate sulfurtransferase 1 (MST1); FUNCTIONS IN: 3-mercaptopyruvate sulfurtransferase activity, sulfurtransferase activity, thiosulfate sulfurtransferase activity; INVOLVED IN: sulfate transport, aging; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Thiosulphate sulfurtransferase, conserved site (InterPro:IPR001307); BEST Arabidopsis thaliana protein match is: rhodanese homologue 2 (TAIR:AT1G16460.2); Has 6251 Blast hits to 6226 proteins in 1459 species: Archae - 162; Bacteria - 3623; Metazoa - 283; Fungi - 152; Plants - 95; Viruses - 0; Other Eukaryotes - 1936 (source: NCBI BLink). & (gnl|cdd|36742 : 324.0) no description available & (gnl|cdd|32722 : 289.0) no description available & (reliability: 1090.0) & (original description: Putative STR2, Description = Thiosulfate/3-mercaptopyruvate sulfurtransferase 2, PFAM = PF00581;PF00581)' T '13.2.5.3' 'amino acid metabolism.degradation.serine-glycine-cysteine group.cysteine' 'niben101scf05688_798303-809718' '(at1g79230 : 557.0) encodes a sulfurtransferase/rhodaneses, which belongs to a group of enzymes widely distributed in all three phyla that catalyze the transfer of sulfur from a donor to a thiophilic acceptor substrate. The protein and transcript levels are NOT affected by senescence or exogenous cyanide, suggesting that sulfurtransferases are involved in cyanide detoxification.; mercaptopyruvate sulfurtransferase 1 (MST1); FUNCTIONS IN: 3-mercaptopyruvate sulfurtransferase activity, sulfurtransferase activity, thiosulfate sulfurtransferase activity; INVOLVED IN: sulfate transport, aging; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Thiosulphate sulfurtransferase, conserved site (InterPro:IPR001307); BEST Arabidopsis thaliana protein match is: rhodanese homologue 2 (TAIR:AT1G16460.2); Has 6251 Blast hits to 6226 proteins in 1459 species: Archae - 162; Bacteria - 3623; Metazoa - 283; Fungi - 152; Plants - 95; Viruses - 0; Other Eukaryotes - 1936 (source: NCBI BLink). & (gnl|cdd|36742 : 331.0) no description available & (gnl|cdd|32722 : 298.0) no description available & (reliability: 1114.0) & (original description: Putative STR1, Description = Thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial, PFAM = PF00581;PF00581)' T '13.2.5.4' 'amino acid metabolism.degradation.serine-glycine-cysteine group.misc' '' '' '13.2.6' 'amino acid metabolism.degradation.aromatic aa' '' '' '13.2.6.1' 'amino acid metabolism.degradation.aromatic aa.phenylalanine' '' '' '13.2.6.2' 'amino acid metabolism.degradation.aromatic aa.tyrosine' 'nbv0.3scaffold15486_34054-39319' '(gnl|cdd|36748 : 304.0) no description available & (at4g15940 : 301.0) Fumarylacetoacetate (FAA) hydrolase family; FUNCTIONS IN: copper ion binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fumarylacetoacetase, C-terminal-like (InterPro:IPR002529), Fumarylacetoacetase, C-terminal-related (InterPro:IPR011234); BEST Arabidopsis thaliana protein match is: Fumarylacetoacetate (FAA) hydrolase family (TAIR:AT3G16700.1); Has 10822 Blast hits to 10670 proteins in 1907 species: Archae - 249; Bacteria - 6730; Metazoa - 306; Fungi - 435; Plants - 75; Viruses - 0; Other Eukaryotes - 3027 (source: NCBI BLink). & (gnl|cdd|30528 : 233.0) no description available & (reliability: 602.0) & (original description: Putative TK1872, Description = 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, FAA hydrolase family, PFAM = PF01557)' T '13.2.6.2' 'amino acid metabolism.degradation.aromatic aa.tyrosine' 'nbv0.3scaffold35390_30862-36715' '(gnl|cdd|35480 : 547.0) no description available & (at5g53970 : 481.0) encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment; Tyrosine transaminase family protein; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G36160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30785 : 244.0) no description available & (p52894|ala2_horvu : 80.9) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (reliability: 962.0) & (original description: Putative tat, Description = Tyrosine aminotransferase, PFAM = PF00155)' T '13.2.6.2' 'amino acid metabolism.degradation.aromatic aa.tyrosine' 'nbv0.3scaffold50589_5769-13690' '(at1g12050 : 704.0) fumarylacetoacetase, putative; FUNCTIONS IN: fumarylacetoacetase activity, catalytic activity; INVOLVED IN: aromatic amino acid family metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fumarylacetoacetase, C-terminal-like (InterPro:IPR002529), Fumarylacetoacetase, C-terminal-related (InterPro:IPR011234), Fumarylacetoacetase, N-terminal (InterPro:IPR015377), Fumarylacetoacetase (InterPro:IPR005959); Has 4441 Blast hits to 4434 proteins in 1063 species: Archae - 139; Bacteria - 2814; Metazoa - 297; Fungi - 179; Plants - 60; Viruses - 0; Other Eukaryotes - 952 (source: NCBI BLink). & (gnl|cdd|38054 : 548.0) no description available & (gnl|cdd|87867 : 177.0) no description available & (reliability: 1408.0) & (original description: Putative Fah, Description = Fumarylacetoacetase, PFAM = PF09298;PF01557)' T '13.2.6.2' 'amino acid metabolism.degradation.aromatic aa.tyrosine' 'nbv0.3scaffold94806_486-3915' '(gnl|cdd|35480 : 401.0) no description available & (at5g53970 : 348.0) encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment; Tyrosine transaminase family protein; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G36160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30785 : 153.0) no description available & (reliability: 696.0) & (original description: Putative tat, Description = Tyrosine aminotransferase, PFAM = PF00155)' T '13.2.6.2' 'amino acid metabolism.degradation.aromatic aa.tyrosine' 'niben044scf00013451ctg006_330-2784' '(gnl|cdd|35480 : 149.0) no description available & (at5g36160 : 138.0) Tyrosine transaminase family protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity; INVOLVED IN: tyrosine catabolic process to phosphoenolpyruvate, cellular amino acid and derivative metabolic process, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G53970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative tat, Description = Tyrosine aminotransferase, PFAM = PF00155)' T '13.2.6.2' 'amino acid metabolism.degradation.aromatic aa.tyrosine' 'niben044scf00025761ctg006_1-4784' '(at4g15940 : 313.0) Fumarylacetoacetate (FAA) hydrolase family; FUNCTIONS IN: copper ion binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fumarylacetoacetase, C-terminal-like (InterPro:IPR002529), Fumarylacetoacetase, C-terminal-related (InterPro:IPR011234); BEST Arabidopsis thaliana protein match is: Fumarylacetoacetate (FAA) hydrolase family (TAIR:AT3G16700.1); Has 10822 Blast hits to 10670 proteins in 1907 species: Archae - 249; Bacteria - 6730; Metazoa - 306; Fungi - 435; Plants - 75; Viruses - 0; Other Eukaryotes - 3027 (source: NCBI BLink). & (gnl|cdd|36748 : 313.0) no description available & (gnl|cdd|30528 : 238.0) no description available & (reliability: 626.0) & (original description: Putative fahd1, Description = Acylpyruvase FAHD1, mitochondrial, PFAM = PF01557)' T '13.2.6.2' 'amino acid metabolism.degradation.aromatic aa.tyrosine' 'niben101scf01119_39535-52938' '(at5g54080 : 786.0) homogentisate 1,2-dioxygenase; "homogentisate 1,2-dioxygenase" (HGO); FUNCTIONS IN: homogentisate 1,2-dioxygenase activity; INVOLVED IN: oxidation reduction, tyrosine metabolic process, L-phenylalanine catabolic process, tyrosine catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Homogentisate 1,2-dioxygenase (InterPro:IPR005708); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5vrh4|hgd_orysa : 706.0) Homogentisate 1,2-dioxygenase (EC 1.13.11.5) (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) - Oryza sativa (Rice) & (gnl|cdd|36631 : 704.0) no description available & (gnl|cdd|81536 : 628.0) no description available & (reliability: 1572.0) & (original description: Putative HGO, Description = Homogentisate 1,2-dioxygenase, PFAM = PF04209)' T '13.2.6.2' 'amino acid metabolism.degradation.aromatic aa.tyrosine' 'niben101scf03035_445156-459418' '(gnl|cdd|35480 : 613.0) no description available & (at5g36160 : 513.0) Tyrosine transaminase family protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity; INVOLVED IN: tyrosine catabolic process to phosphoenolpyruvate, cellular amino acid and derivative metabolic process, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G53970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30785 : 217.0) no description available & (p52894|ala2_horvu : 82.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (reliability: 988.0) & (original description: Putative TAT, Description = Tyrosine aminotransferase, PFAM = PF00155)' T '13.2.6.2' 'amino acid metabolism.degradation.aromatic aa.tyrosine' 'niben101scf06338_71549-82081' '(gnl|cdd|35480 : 624.0) no description available & (at5g36160 : 552.0) Tyrosine transaminase family protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity; INVOLVED IN: tyrosine catabolic process to phosphoenolpyruvate, cellular amino acid and derivative metabolic process, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G53970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30785 : 228.0) no description available & (reliability: 1080.0) & (original description: Putative TAT, Description = Tyrosine aminotransferase, PFAM = PF00155)' T '13.2.6.2' 'amino acid metabolism.degradation.aromatic aa.tyrosine' 'niben101scf06556_705118-719133' '(at4g15940 : 309.0) Fumarylacetoacetate (FAA) hydrolase family; FUNCTIONS IN: copper ion binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fumarylacetoacetase, C-terminal-like (InterPro:IPR002529), Fumarylacetoacetase, C-terminal-related (InterPro:IPR011234); BEST Arabidopsis thaliana protein match is: Fumarylacetoacetate (FAA) hydrolase family (TAIR:AT3G16700.1); Has 10822 Blast hits to 10670 proteins in 1907 species: Archae - 249; Bacteria - 6730; Metazoa - 306; Fungi - 435; Plants - 75; Viruses - 0; Other Eukaryotes - 3027 (source: NCBI BLink). & (gnl|cdd|36748 : 304.0) no description available & (gnl|cdd|30528 : 232.0) no description available & (reliability: 618.0) & (original description: Putative fahd1, Description = Acylpyruvase FAHD1, mitochondrial, PFAM = PF01557)' T '13.2.6.2' 'amino acid metabolism.degradation.aromatic aa.tyrosine' 'niben101scf07714_24247-32014' '(gnl|cdd|35480 : 584.0) no description available & (at5g53970 : 577.0) encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment; Tyrosine transaminase family protein; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G36160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30785 : 240.0) no description available & (reliability: 1154.0) & (original description: Putative tat, Description = Tyrosine aminotransferase, PFAM = PF00155)' T '13.2.6.2' 'amino acid metabolism.degradation.aromatic aa.tyrosine' 'niben101scf08309_108762-114435' '(at5g54080 : 778.0) homogentisate 1,2-dioxygenase; "homogentisate 1,2-dioxygenase" (HGO); FUNCTIONS IN: homogentisate 1,2-dioxygenase activity; INVOLVED IN: oxidation reduction, tyrosine metabolic process, L-phenylalanine catabolic process, tyrosine catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Homogentisate 1,2-dioxygenase (InterPro:IPR005708); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5vrh4|hgd_orysa : 706.0) Homogentisate 1,2-dioxygenase (EC 1.13.11.5) (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) - Oryza sativa (Rice) & (gnl|cdd|36631 : 701.0) no description available & (gnl|cdd|81536 : 626.0) no description available & (reliability: 1556.0) & (original description: Putative HGO, Description = Homogentisate 1,2-dioxygenase, PFAM = PF04209)' T '13.2.6.2' 'amino acid metabolism.degradation.aromatic aa.tyrosine' 'niben101scf17787_15300-29278' '(at1g12050 : 702.0) fumarylacetoacetase, putative; FUNCTIONS IN: fumarylacetoacetase activity, catalytic activity; INVOLVED IN: aromatic amino acid family metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fumarylacetoacetase, C-terminal-like (InterPro:IPR002529), Fumarylacetoacetase, C-terminal-related (InterPro:IPR011234), Fumarylacetoacetase, N-terminal (InterPro:IPR015377), Fumarylacetoacetase (InterPro:IPR005959); Has 4441 Blast hits to 4434 proteins in 1063 species: Archae - 139; Bacteria - 2814; Metazoa - 297; Fungi - 179; Plants - 60; Viruses - 0; Other Eukaryotes - 952 (source: NCBI BLink). & (gnl|cdd|38054 : 546.0) no description available & (gnl|cdd|87867 : 175.0) no description available & (reliability: 1404.0) & (original description: Putative fah, Description = Fumarylacetoacetase, PFAM = PF01557;PF09298)' T '13.2.6.2.6' 'amino acid metabolism.degradation.aromatic aa.tyrosine.fumarylacetoacetase' '' '' '13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'nbv0.3scaffold14335_17652-23956' '(at4g16800 : 320.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: enoyl-CoA hydratase activity, catalytic activity; INVOLVED IN: fatty acid metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 (TAIR:AT5G43280.1); Has 38027 Blast hits to 38009 proteins in 2336 species: Archae - 484; Bacteria - 24986; Metazoa - 1599; Fungi - 771; Plants - 617; Viruses - 0; Other Eukaryotes - 9570 (source: NCBI BLink). & (gnl|cdd|36892 : 320.0) no description available & (gnl|cdd|82307 : 271.0) no description available & (reliability: 640.0) & (original description: Putative auh, Description = Methylglutaconyl-CoA hydratase, mitochondrial, PFAM = PF00378)' T '13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'nbv0.3scaffold24967_727-10418' '(at3g60510 : 496.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G31810.1). & (gnl|cdd|36897 : 442.0) no description available & (gnl|cdd|75599 : 265.0) no description available & (reliability: 992.0) & (original description: Putative At3g60510, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial, PFAM = PF16113)' T '13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'nbv0.5scaffold392_393993-410921' '(at3g60510 : 488.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G31810.1). & (gnl|cdd|36897 : 429.0) no description available & (gnl|cdd|75599 : 282.0) no description available & (reliability: 976.0) & (original description: Putative At3g60510, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial, PFAM = PF16113)' T '13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'nbv0.5scaffold1324_1-12352' '(at4g13360 : 299.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT3G24360.1); Has 20226 Blast hits to 20218 proteins in 1812 species: Archae - 355; Bacteria - 13945; Metazoa - 843; Fungi - 613; Plants - 486; Viruses - 0; Other Eukaryotes - 3984 (source: NCBI BLink). & (gnl|cdd|36897 : 211.0) no description available & (gnl|cdd|75599 : 118.0) no description available & (reliability: 598.0) & (original description: Putative At3g24360, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial, PFAM = PF16113)' T '13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'nbv0.5scaffold1747_231606-241185' '(at3g60510 : 417.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G31810.1). & (gnl|cdd|36897 : 375.0) no description available & (gnl|cdd|75599 : 214.0) no description available & (reliability: 834.0) & (original description: Putative CHY1, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial, PFAM = PF16113;PF16113;PF16113)' T '13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'nbv0.5scaffold2772_200310-220742' '(at4g13360 : 553.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT3G24360.1); Has 20226 Blast hits to 20218 proteins in 1812 species: Archae - 355; Bacteria - 13945; Metazoa - 843; Fungi - 613; Plants - 486; Viruses - 0; Other Eukaryotes - 3984 (source: NCBI BLink). & (gnl|cdd|36897 : 422.0) no description available & (gnl|cdd|75306 : 245.0) no description available & (reliability: 1106.0) & (original description: Putative At4g13360, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial, PFAM = PF16113)' T '13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben044scf00030495ctg011_2184-10895' '(at3g24360 : 539.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: fatty acid beta-oxidation, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G13360.1); Has 22029 Blast hits to 22019 proteins in 1814 species: Archae - 358; Bacteria - 15169; Metazoa - 927; Fungi - 600; Plants - 484; Viruses - 0; Other Eukaryotes - 4491 (source: NCBI BLink). & (gnl|cdd|36897 : 408.0) no description available & (gnl|cdd|75306 : 239.0) no description available & (reliability: 1078.0) & (original description: Putative At4g13360, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial, PFAM = PF16113)' T '13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf00878_315242-326183' '(at3g60510 : 484.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G31810.1). & (gnl|cdd|36897 : 430.0) no description available & (gnl|cdd|75599 : 254.0) no description available & (reliability: 968.0) & (original description: Putative At3g60510, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial, PFAM = PF16113;PF16113)' T '13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf00917_462841-477723' '(at4g13360 : 583.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT3G24360.1); Has 20226 Blast hits to 20218 proteins in 1812 species: Archae - 355; Bacteria - 13945; Metazoa - 843; Fungi - 613; Plants - 486; Viruses - 0; Other Eukaryotes - 3984 (source: NCBI BLink). & (gnl|cdd|36897 : 432.0) no description available & (gnl|cdd|75306 : 241.0) no description available & (reliability: 1166.0) & (original description: Putative At4g13360, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial, PFAM = PF16113)' T '13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf02451_660668-669283' '(at3g24360 : 476.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: fatty acid beta-oxidation, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G13360.1); Has 22029 Blast hits to 22019 proteins in 1814 species: Archae - 358; Bacteria - 15169; Metazoa - 927; Fungi - 600; Plants - 484; Viruses - 0; Other Eukaryotes - 4491 (source: NCBI BLink). & (gnl|cdd|36897 : 355.0) no description available & (gnl|cdd|75306 : 208.0) no description available & (reliability: 952.0) & (original description: Putative At3g24360, Description = 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial, PFAM = PF16113;PF16113)' T '13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf02568_80434-89389' '(at1g06550 : 534.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: response to karrikin, fatty acid beta-oxidation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: beta-hydroxyisobutyryl-CoA hydrolase 1 (TAIR:AT5G65940.1); Has 26566 Blast hits to 26556 proteins in 2155 species: Archae - 406; Bacteria - 18031; Metazoa - 1157; Fungi - 686; Plants - 463; Viruses - 0; Other Eukaryotes - 5823 (source: NCBI BLink). & (gnl|cdd|36897 : 341.0) no description available & (gnl|cdd|75599 : 254.0) no description available & (reliability: 1068.0) & (original description: Putative hibch, Description = 3-hydroxyisobutyryl-coenzyme A hydrolase, PFAM = PF16113)' T '13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf02909_476612-487993' '(at5g65940 : 563.0) hydrolyzes beta-hydroxyisobutyryl-CoA; beta-hydroxyisobutyryl-CoA hydrolase 1 (CHY1); CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT2G30660.1); Has 31609 Blast hits to 31599 proteins in 2217 species: Archae - 411; Bacteria - 21537; Metazoa - 1271; Fungi - 809; Plants - 626; Viruses - 0; Other Eukaryotes - 6955 (source: NCBI BLink). & (gnl|cdd|36897 : 405.0) no description available & (gnl|cdd|75599 : 299.0) no description available & (reliability: 1126.0) & (original description: Putative CHY1, Description = 3-hydroxyisobutyryl-CoA hydrolase 1, PFAM = PF16113)' T '13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf03018_1877737-1936486' '(at2g30660 : 392.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: beta-hydroxyisobutyryl-CoA hydrolase 1 (TAIR:AT5G65940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36897 : 350.0) no description available & (gnl|cdd|75599 : 277.0) no description available & (reliability: 784.0) & (original description: Putative CHY1, Description = 3-hydroxyisobutyryl-CoA hydrolase 1, PFAM = PF16113)' T '13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf03018_1886358-1923239' '(at2g30660 : 228.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: beta-hydroxyisobutyryl-CoA hydrolase 1 (TAIR:AT5G65940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36897 : 200.0) no description available & (gnl|cdd|75599 : 165.0) no description available & (reliability: 456.0) & (original description: Putative hibch, Description = 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial, PFAM = PF16113)' T '13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf03720_108168-113093' '(at4g16210 : 380.0) enoyl-CoA hydratase/isomerase A (ECHIA); FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: enoyl-CoA hydratase/isomerase D (TAIR:AT1G60550.1); Has 36619 Blast hits to 36609 proteins in 2298 species: Archae - 475; Bacteria - 23840; Metazoa - 1646; Fungi - 934; Plants - 612; Viruses - 0; Other Eukaryotes - 9112 (source: NCBI BLink). & (gnl|cdd|36893 : 241.0) no description available & (gnl|cdd|81879 : 236.0) no description available & (q39659|mfpa_cucsa : 101.0) Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase ( & (reliability: 760.0) & (original description: Putative ECHIA, Description = Probable enoyl-CoA hydratase 1, peroxisomal, PFAM = PF00378)' T '13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf04103_1-12416' '(at3g24360 : 550.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: fatty acid beta-oxidation, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G13360.1); Has 22029 Blast hits to 22019 proteins in 1814 species: Archae - 358; Bacteria - 15169; Metazoa - 927; Fungi - 600; Plants - 484; Viruses - 0; Other Eukaryotes - 4491 (source: NCBI BLink). & (gnl|cdd|36897 : 415.0) no description available & (gnl|cdd|75306 : 250.0) no description available & (reliability: 1100.0) & (original description: Putative At3g24360, Description = Putative 3-hydroxyisobutyryl-CoA hydrolase-like protein 4, mitochondrial-like, PFAM = PF16113)' T '13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf04727_328978-336149' '(at5g48230 : 553.0) acetoacetyl-CoA thiolase 2 (ACAT2); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acetyl-CoA C-acetyltransferase activity, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: peroxisome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: Thiolase family protein (TAIR:AT5G47720.4); Has 23891 Blast hits to 23860 proteins in 2352 species: Archae - 483; Bacteria - 15387; Metazoa - 1000; Fungi - 680; Plants - 248; Viruses - 0; Other Eukaryotes - 6093 (source: NCBI BLink). & (gnl|cdd|36604 : 541.0) no description available & (gnl|cdd|29411 : 455.0) no description available & (reliability: 1090.0) & (original description: Putative atoB, Description = Acetyl-CoA C-acetyltransferase, PFAM = PF00108;PF02803)' T '13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf05348_10464-13195' '(at1g65520 : 250.0) encodes a peroxisomal delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation; "delta(3), delta(2)-enoyl CoA isomerase 1" (ECI1); FUNCTIONS IN: carnitine racemase activity, catalytic activity, dodecenoyl-CoA delta-isomerase activity; INVOLVED IN: fatty acid catabolic process, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: 3-hydroxyacyl-CoA dehydratase 1 (TAIR:AT4G14440.1); Has 6860 Blast hits to 6860 proteins in 1261 species: Archae - 142; Bacteria - 4521; Metazoa - 587; Fungi - 178; Plants - 198; Viruses - 0; Other Eukaryotes - 1234 (source: NCBI BLink). & (gnl|cdd|31227 : 86.3) no description available & (reliability: 500.0) & (original description: Putative ECI1, Description = Enoyl-CoA delta isomerase 1, peroxisomal, PFAM = PF00378)' T '13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf05433_32179-39133' '(at5g48230 : 577.0) acetoacetyl-CoA thiolase 2 (ACAT2); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acetyl-CoA C-acetyltransferase activity, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: peroxisome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: Thiolase family protein (TAIR:AT5G47720.4); Has 23891 Blast hits to 23860 proteins in 2352 species: Archae - 483; Bacteria - 15387; Metazoa - 1000; Fungi - 680; Plants - 248; Viruses - 0; Other Eukaryotes - 6093 (source: NCBI BLink). & (gnl|cdd|36604 : 549.0) no description available & (gnl|cdd|29411 : 461.0) no description available & (reliability: 1110.0) & (original description: Putative AAT1, Description = Acetyl-CoA acetyltransferase, cytosolic 1, PFAM = PF02803;PF00108)' T '13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf06078_463131-473379' '(at4g16800 : 319.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: enoyl-CoA hydratase activity, catalytic activity; INVOLVED IN: fatty acid metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 (TAIR:AT5G43280.1); Has 38027 Blast hits to 38009 proteins in 2336 species: Archae - 484; Bacteria - 24986; Metazoa - 1599; Fungi - 771; Plants - 617; Viruses - 0; Other Eukaryotes - 9570 (source: NCBI BLink). & (gnl|cdd|36892 : 318.0) no description available & (gnl|cdd|82307 : 269.0) no description available & (reliability: 638.0) & (original description: Putative auh, Description = Methylglutaconyl-CoA hydratase, mitochondrial, PFAM = PF00378)' T '13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf06423_199340-207955' '(at5g47720 : 599.0) Thiolase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acetyl-CoA C-acetyltransferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039); BEST Arabidopsis thaliana protein match is: acetoacetyl-CoA thiolase 2 (TAIR:AT5G48230.2); Has 23291 Blast hits to 23276 proteins in 2315 species: Archae - 454; Bacteria - 14875; Metazoa - 988; Fungi - 698; Plants - 252; Viruses - 0; Other Eukaryotes - 6024 (source: NCBI BLink). & (gnl|cdd|36604 : 547.0) no description available & (gnl|cdd|29411 : 460.0) no description available & (reliability: 1198.0) & (original description: Putative atoB, Description = Acetyl-CoA acetyltransferase, PFAM = PF02803;PF00108)' T '13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'niben101scf11064_11955-14671' '(at4g14430 : 233.0) Encodes a peroxisomal delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation. This enzyme might also be involved in the conversion of indole-3-butyric acid to indole-3-acetic acid via a beta-oxidation-like pathway.; indole-3-butyric acid response 10 (IBR10); FUNCTIONS IN: catalytic activity, dodecenoyl-CoA delta-isomerase activity; INVOLVED IN: fatty acid catabolic process, root hair elongation, metabolic process, indolebutyric acid metabolic process, response to indolebutyric acid stimulus; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: 3-hydroxyacyl-CoA dehydratase 1 (TAIR:AT4G14440.1); Has 14072 Blast hits to 14069 proteins in 1567 species: Archae - 245; Bacteria - 9896; Metazoa - 835; Fungi - 284; Plants - 269; Viruses - 0; Other Eukaryotes - 2543 (source: NCBI BLink). & (gnl|cdd|31227 : 80.1) no description available & (reliability: 466.0) & (original description: Putative ECI3, Description = Enoyl-CoA delta isomerase 3, PFAM = PF00378)' T '13.2.6.4' 'amino acid metabolism.degradation.aromatic aa.chorismate' '' '' '13.2.6.5' 'amino acid metabolism.degradation.aromatic aa.misc' '' '' '13.2.7' 'amino acid metabolism.degradation.histidine' 'nbv0.3scaffold73369_4580-8544' '(at1g43710 : 331.0) embryo defective 1075 (emb1075); FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity; INVOLVED IN: cellular amino acid metabolic process, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal-phosphate binding site (InterPro:IPR021115), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 2 (TAIR:AT1G65960.1); Has 3259 Blast hits to 3251 proteins in 995 species: Archae - 187; Bacteria - 1878; Metazoa - 518; Fungi - 211; Plants - 249; Viruses - 11; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|81035 : 218.0) no description available & (gnl|cdd|35848 : 188.0) no description available & (reliability: 662.0) & (original description: Putative hdc, Description = Histidine decarboxylase, PFAM = PF00282)' T '13.2.7' 'amino acid metabolism.degradation.histidine' 'nbv0.5scaffold439_256771-262216' '(at1g43710 : 537.0) embryo defective 1075 (emb1075); FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity; INVOLVED IN: cellular amino acid metabolic process, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal-phosphate binding site (InterPro:IPR021115), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 2 (TAIR:AT1G65960.1); Has 3259 Blast hits to 3251 proteins in 995 species: Archae - 187; Bacteria - 1878; Metazoa - 518; Fungi - 211; Plants - 249; Viruses - 11; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|81035 : 342.0) no description available & (gnl|cdd|35848 : 274.0) no description available & (reliability: 1074.0) & (original description: Putative hdc, Description = Histidine decarboxylase, PFAM = PF00282)' T '13.2.7' 'amino acid metabolism.degradation.histidine' 'nbv0.5scaffold20831_1-1423' '(at1g43710 : 213.0) embryo defective 1075 (emb1075); FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity; INVOLVED IN: cellular amino acid metabolic process, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal-phosphate binding site (InterPro:IPR021115), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 2 (TAIR:AT1G65960.1); Has 3259 Blast hits to 3251 proteins in 995 species: Archae - 187; Bacteria - 1878; Metazoa - 518; Fungi - 211; Plants - 249; Viruses - 11; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|81035 : 172.0) no description available & (gnl|cdd|35848 : 140.0) no description available & (reliability: 426.0) & (original description: Putative hdc, Description = Histidine decarboxylase, PFAM = PF00282)' T '13.2.7' 'amino acid metabolism.degradation.histidine' 'niben044scf00042602ctg006_441-5783' '(at1g43710 : 538.0) embryo defective 1075 (emb1075); FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity; INVOLVED IN: cellular amino acid metabolic process, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal-phosphate binding site (InterPro:IPR021115), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 2 (TAIR:AT1G65960.1); Has 3259 Blast hits to 3251 proteins in 995 species: Archae - 187; Bacteria - 1878; Metazoa - 518; Fungi - 211; Plants - 249; Viruses - 11; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|81035 : 339.0) no description available & (gnl|cdd|35848 : 277.0) no description available & (reliability: 1076.0) & (original description: Putative AADC2, Description = Aromatic amino acid decarboxylase 2, PFAM = PF00282)' T '13.2.7' 'amino acid metabolism.degradation.histidine' 'niben101scf01777_72722-79576' '(at1g43710 : 521.0) embryo defective 1075 (emb1075); FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity; INVOLVED IN: cellular amino acid metabolic process, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal-phosphate binding site (InterPro:IPR021115), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 2 (TAIR:AT1G65960.1); Has 3259 Blast hits to 3251 proteins in 995 species: Archae - 187; Bacteria - 1878; Metazoa - 518; Fungi - 211; Plants - 249; Viruses - 11; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|81035 : 343.0) no description available & (gnl|cdd|35848 : 272.0) no description available & (reliability: 1042.0) & (original description: Putative hdc, Description = Histidine decarboxylase, PFAM = PF00282)' T '13.2.7' 'amino acid metabolism.degradation.histidine' 'niben101scf02191_32310-38071' '(at1g43710 : 812.0) embryo defective 1075 (emb1075); FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity; INVOLVED IN: cellular amino acid metabolic process, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal-phosphate binding site (InterPro:IPR021115), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 2 (TAIR:AT1G65960.1); Has 3259 Blast hits to 3251 proteins in 995 species: Archae - 187; Bacteria - 1878; Metazoa - 518; Fungi - 211; Plants - 249; Viruses - 11; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|35848 : 407.0) no description available & (gnl|cdd|81035 : 356.0) no description available & (reliability: 1624.0) & (original description: Putative SDC, Description = Serine decarboxylase, PFAM = PF00282)' T '13.2.7' 'amino acid metabolism.degradation.histidine' 'niben101scf05824_422495-427834' '(at1g43710 : 544.0) embryo defective 1075 (emb1075); FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity; INVOLVED IN: cellular amino acid metabolic process, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal-phosphate binding site (InterPro:IPR021115), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 2 (TAIR:AT1G65960.1); Has 3259 Blast hits to 3251 proteins in 995 species: Archae - 187; Bacteria - 1878; Metazoa - 518; Fungi - 211; Plants - 249; Viruses - 11; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|81035 : 347.0) no description available & (gnl|cdd|35848 : 286.0) no description available & (reliability: 1088.0) & (original description: Putative hdc, Description = Histidine decarboxylase, PFAM = PF00282)' T '13.99' 'amino acid metabolism.misc' 'nbv0.3scaffold73465_1302-7971' '(at1g76990 : 649.0) ACT domain repeat 3 (ACR3); FUNCTIONS IN: amino acid binding; INVOLVED IN: nitrogen compound metabolic process, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein-PII uridylyltransferase (InterPro:IPR010043), Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 4 (TAIR:AT1G69040.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80394 : 132.0) no description available & (reliability: 1298.0) & (original description: Putative ACR3, Description = ACT domain-containing protein ACR3, PFAM = PF01842;PF01842;PF01842)' T '13.99' 'amino acid metabolism.misc' 'nbv0.5scaffold3940_4191-10862' '(at1g76990 : 632.0) ACT domain repeat 3 (ACR3); FUNCTIONS IN: amino acid binding; INVOLVED IN: nitrogen compound metabolic process, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein-PII uridylyltransferase (InterPro:IPR010043), Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 4 (TAIR:AT1G69040.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80394 : 132.0) no description available & (reliability: 1264.0) & (original description: Putative ACR2, Description = ACT domain-containing protein ACR2, PFAM = PF01842;PF01842;PF01842)' T '13.99' 'amino acid metabolism.misc' 'nbv0.5scaffold3984_95143-99449' '(at1g12420 : 551.0) ACT domain repeat 8 (ACR8); CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 7 (TAIR:AT4G22780.1); Has 2013 Blast hits to 1422 proteins in 371 species: Archae - 0; Bacteria - 1118; Metazoa - 0; Fungi - 0; Plants - 487; Viruses - 0; Other Eukaryotes - 408 (source: NCBI BLink). & (gnl|cdd|80396 : 126.0) no description available & (reliability: 1102.0) & (original description: Putative ACR8, Description = ACT domain-containing protein ACR8, PFAM = PF01842;PF01842)' T '13.99' 'amino acid metabolism.misc' 'nbv0.5scaffold5892_120820-127538' '(at1g76990 : 637.0) ACT domain repeat 3 (ACR3); FUNCTIONS IN: amino acid binding; INVOLVED IN: nitrogen compound metabolic process, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein-PII uridylyltransferase (InterPro:IPR010043), Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 4 (TAIR:AT1G69040.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80394 : 127.0) no description available & (reliability: 1274.0) & (original description: Putative ACR3, Description = ACT domain-containing protein ACR3, PFAM = PF01842;PF01842;PF01842)' T '13.99' 'amino acid metabolism.misc' 'niben044scf00022844ctg004_1460-6139' '(at1g76990 : 459.0) ACT domain repeat 3 (ACR3); FUNCTIONS IN: amino acid binding; INVOLVED IN: nitrogen compound metabolic process, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein-PII uridylyltransferase (InterPro:IPR010043), Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 4 (TAIR:AT1G69040.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80394 : 129.0) no description available & (reliability: 918.0) & (original description: Putative ACR2, Description = [Protein-PII] uridylyltransferase, PFAM = PF01842;PF01842)' T '13.99' 'amino acid metabolism.misc' 'niben044scf00022908ctg002_399-5162' '(at3g01990 : 539.0) Member of a small family of ACT domain containing proteins in Arabidopsis. ACT domains are involved in amino acid binding.; ACT domain repeat 6 (ACR6); FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 4 (TAIR:AT1G69040.1); Has 3173 Blast hits to 1993 proteins in 619 species: Archae - 0; Bacteria - 2121; Metazoa - 0; Fungi - 0; Plants - 561; Viruses - 0; Other Eukaryotes - 491 (source: NCBI BLink). & (gnl|cdd|80396 : 124.0) no description available & (reliability: 1022.0) & (original description: Putative ACR6, Description = ACT domain-containing protein ACR6, PFAM = PF01842;PF01842)' T '13.99' 'amino acid metabolism.misc' 'niben044scf00058283ctg000_4512-7332' '(at1g49820 : 207.0) encodes 5-methylthioribose kinase, involved in methionine cycle; S-methyl-5-thioribose kinase (MTK); CONTAINS InterPro DOMAIN/s: Methylthioribose kinase (InterPro:IPR009212), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); Has 954 Blast hits to 954 proteins in 299 species: Archae - 0; Bacteria - 750; Metazoa - 4; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (gnl|cdd|83076 : 166.0) no description available & (reliability: 414.0) & (original description: Putative mtnK, Description = Methylthioribose kinase, PFAM = )' T '13.99' 'amino acid metabolism.misc' 'niben101scf00483_454449-467209' '(at1g76990 : 636.0) ACT domain repeat 3 (ACR3); FUNCTIONS IN: amino acid binding; INVOLVED IN: nitrogen compound metabolic process, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein-PII uridylyltransferase (InterPro:IPR010043), Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 4 (TAIR:AT1G69040.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80394 : 132.0) no description available & (reliability: 1272.0) & (original description: Putative ACR3, Description = ACT domain-containing protein ACR3, PFAM = PF01842;PF01842;PF01842)' T '13.99' 'amino acid metabolism.misc' 'niben101scf00915_137428-141407' '(at1g69040 : 477.0) ACT-domain containing protein involved in feedback regulation of amino acid metabolism; ACT domain repeat 4 (ACR4); FUNCTIONS IN: amino acid binding; INVOLVED IN: regulation of cellular amino acid metabolic process, response to cytokinin stimulus; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 5 (TAIR:AT2G03730.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80396 : 120.0) no description available & (reliability: 954.0) & (original description: Putative Sb07g026100, Description = Putative uncharacterized protein Sb07g026100, PFAM = PF01842;PF01842)' T '13.99' 'amino acid metabolism.misc' 'niben101scf01341_119685-122625' '(at1g49820 : 246.0) encodes 5-methylthioribose kinase, involved in methionine cycle; S-methyl-5-thioribose kinase (MTK); CONTAINS InterPro DOMAIN/s: Methylthioribose kinase (InterPro:IPR009212), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); Has 954 Blast hits to 954 proteins in 299 species: Archae - 0; Bacteria - 750; Metazoa - 4; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (gnl|cdd|83076 : 183.0) no description available & (reliability: 492.0) & (original description: Putative mtnK, Description = Methylthioribose kinase, PFAM = )' T '13.99' 'amino acid metabolism.misc' 'niben101scf01423_129633-134787' '(at1g69040 : 680.0) ACT-domain containing protein involved in feedback regulation of amino acid metabolism; ACT domain repeat 4 (ACR4); FUNCTIONS IN: amino acid binding; INVOLVED IN: regulation of cellular amino acid metabolic process, response to cytokinin stimulus; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 5 (TAIR:AT2G03730.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80396 : 131.0) no description available & (reliability: 1360.0) & (original description: Putative ACR4, Description = ACT domain-containing protein ACR4, PFAM = PF01842)' T '13.99' 'amino acid metabolism.misc' 'niben101scf02188_249021-259541' '(at3g01990 : 538.0) Member of a small family of ACT domain containing proteins in Arabidopsis. ACT domains are involved in amino acid binding.; ACT domain repeat 6 (ACR6); FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 4 (TAIR:AT1G69040.1); Has 3173 Blast hits to 1993 proteins in 619 species: Archae - 0; Bacteria - 2121; Metazoa - 0; Fungi - 0; Plants - 561; Viruses - 0; Other Eukaryotes - 491 (source: NCBI BLink). & (gnl|cdd|80396 : 123.0) no description available & (reliability: 1046.0) & (original description: Putative ACR6, Description = ACT domain-containing protein ACR6, PFAM = PF01842;PF01842)' T '13.99' 'amino acid metabolism.misc' 'niben101scf02652_233992-238318' '(at1g12420 : 555.0) ACT domain repeat 8 (ACR8); CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 7 (TAIR:AT4G22780.1); Has 2013 Blast hits to 1422 proteins in 371 species: Archae - 0; Bacteria - 1118; Metazoa - 0; Fungi - 0; Plants - 487; Viruses - 0; Other Eukaryotes - 408 (source: NCBI BLink). & (gnl|cdd|80396 : 128.0) no description available & (reliability: 1110.0) & (original description: Putative ACR8, Description = ACT domain-containing protein ACR8, PFAM = PF01842;PF01842)' T '13.99' 'amino acid metabolism.misc' 'niben101scf03374_744298-749821' '(at1g12420 : 551.0) ACT domain repeat 8 (ACR8); CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 7 (TAIR:AT4G22780.1); Has 2013 Blast hits to 1422 proteins in 371 species: Archae - 0; Bacteria - 1118; Metazoa - 0; Fungi - 0; Plants - 487; Viruses - 0; Other Eukaryotes - 408 (source: NCBI BLink). & (gnl|cdd|80394 : 115.0) no description available & (reliability: 1102.0) & (original description: Putative ACR8, Description = ACT domain-containing protein ACR8, PFAM = PF01842;PF01842)' T '13.99' 'amino acid metabolism.misc' 'niben101scf03385_81515-86980' '(at1g49820 : 652.0) encodes 5-methylthioribose kinase, involved in methionine cycle; S-methyl-5-thioribose kinase (MTK); CONTAINS InterPro DOMAIN/s: Methylthioribose kinase (InterPro:IPR009212), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); Has 954 Blast hits to 954 proteins in 299 species: Archae - 0; Bacteria - 750; Metazoa - 4; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (gnl|cdd|83076 : 433.0) no description available & (reliability: 1304.0) & (original description: Putative MTK, Description = Methylthioribose kinase, PFAM = PF01636)' T '13.99' 'amino acid metabolism.misc' 'niben101scf05078_548645-553040' '(at1g69040 : 468.0) ACT-domain containing protein involved in feedback regulation of amino acid metabolism; ACT domain repeat 4 (ACR4); FUNCTIONS IN: amino acid binding; INVOLVED IN: regulation of cellular amino acid metabolic process, response to cytokinin stimulus; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 5 (TAIR:AT2G03730.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80396 : 123.0) no description available & (reliability: 936.0) & (original description: Putative ACR4, Description = ACT domain-containing protein ACR4, PFAM = PF01842;PF01842)' T '13.99' 'amino acid metabolism.misc' 'niben101scf20316_228738-233843' '(at1g69040 : 596.0) ACT-domain containing protein involved in feedback regulation of amino acid metabolism; ACT domain repeat 4 (ACR4); FUNCTIONS IN: amino acid binding; INVOLVED IN: regulation of cellular amino acid metabolic process, response to cytokinin stimulus; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 5 (TAIR:AT2G03730.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80396 : 132.0) no description available & (reliability: 1192.0) & (original description: Putative ACR4, Description = ACT domain-containing protein ACR4, PFAM = PF01842)' T '13.99.1' 'amino acid metabolism.misc.central amino acid metabolism' '' '' '13.99.2' 'amino acid metabolism.misc.glutamate family' '' '' '13.99.2.4' 'amino acid metabolism.misc.glutamate family.hydroxyproline' '' '' '13.1001' 'amino acid metabolism.methionine S-oxide' 'methionine s-oxide' 'oxydized product is recycled via reeductase; Methionine sulfoxide' M '14' 'S-assimilation' '' '' '14.1' 'S-assimilation.ATPS' 'niben044scf00009853ctg036_1-5454' '(at3g22890 : 745.0) encodes ATP sulfurylase, the first enzyme in the sulfate assimilation pathway of Arabidopsis.; ATP sulfurylase 1 (APS1); FUNCTIONS IN: sulfate adenylyltransferase (ATP) activity; INVOLVED IN: response to cadmium ion, response to salt stress; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Sulphate adenylyltransferase (InterPro:IPR002650); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase/archaeosine transglycosylase-like family protein (TAIR:AT4G14680.1); Has 2073 Blast hits to 2070 proteins in 648 species: Archae - 98; Bacteria - 862; Metazoa - 241; Fungi - 201; Plants - 187; Viruses - 0; Other Eukaryotes - 484 (source: NCBI BLink). & (gnl|cdd|35855 : 571.0) no description available & (gnl|cdd|28806 : 439.0) no description available & (reliability: 1490.0) & (original description: Putative APS1, Description = ATP sulfurylase 1, chloroplastic, PFAM = PF14306;PF01747)' T '14.1' 'S-assimilation.ATPS' 'niben101scf03927_393729-400677' '(at3g22890 : 739.0) encodes ATP sulfurylase, the first enzyme in the sulfate assimilation pathway of Arabidopsis.; ATP sulfurylase 1 (APS1); FUNCTIONS IN: sulfate adenylyltransferase (ATP) activity; INVOLVED IN: response to cadmium ion, response to salt stress; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Sulphate adenylyltransferase (InterPro:IPR002650); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase/archaeosine transglycosylase-like family protein (TAIR:AT4G14680.1); Has 2073 Blast hits to 2070 proteins in 648 species: Archae - 98; Bacteria - 862; Metazoa - 241; Fungi - 201; Plants - 187; Viruses - 0; Other Eukaryotes - 484 (source: NCBI BLink). & (gnl|cdd|35855 : 566.0) no description available & (gnl|cdd|28806 : 438.0) no description available & (reliability: 1478.0) & (original description: Putative APS1, Description = ATP sulfurylase 1, chloroplastic, PFAM = PF01747;PF14306)' T '14.1' 'S-assimilation.ATPS' 'niben101scf06205_270805-276911' '(at3g22890 : 729.0) encodes ATP sulfurylase, the first enzyme in the sulfate assimilation pathway of Arabidopsis.; ATP sulfurylase 1 (APS1); FUNCTIONS IN: sulfate adenylyltransferase (ATP) activity; INVOLVED IN: response to cadmium ion, response to salt stress; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Sulphate adenylyltransferase (InterPro:IPR002650); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase/archaeosine transglycosylase-like family protein (TAIR:AT4G14680.1); Has 2073 Blast hits to 2070 proteins in 648 species: Archae - 98; Bacteria - 862; Metazoa - 241; Fungi - 201; Plants - 187; Viruses - 0; Other Eukaryotes - 484 (source: NCBI BLink). & (gnl|cdd|35855 : 572.0) no description available & (gnl|cdd|28806 : 444.0) no description available & (reliability: 1458.0) & (original description: Putative APS3, Description = ATP-sulfurylase 3, chloroplastic, PFAM = PF01747;PF14306)' T '14.1' 'S-assimilation.ATPS' 'niben101scf16508_70421-77043' '(at1g19920 : 771.0) encodes a chloroplast form of ATP sulfurylase; APS2; FUNCTIONS IN: sulfate adenylyltransferase (ATP) activity; INVOLVED IN: sulfate assimilation; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Sulphate adenylyltransferase (InterPro:IPR002650); BEST Arabidopsis thaliana protein match is: ATP sulfurylase 1 (TAIR:AT3G22890.1); Has 2101 Blast hits to 2098 proteins in 651 species: Archae - 98; Bacteria - 865; Metazoa - 242; Fungi - 201; Plants - 187; Viruses - 0; Other Eukaryotes - 508 (source: NCBI BLink). & (gnl|cdd|35855 : 578.0) no description available & (gnl|cdd|28806 : 445.0) no description available & (reliability: 1542.0) & (original description: Putative APS2, Description = ATP sulfurylase 2, PFAM = PF01747;PF14306)' T '14.2' 'S-assimilation.APR' 'nbv0.3scaffold16428_13601-18505' '(at4g04610 : 650.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.; APS reductase 1 (APR1); FUNCTIONS IN: adenylyl-sulfate reductase activity; INVOLVED IN: response to oxidative stress, sulfate reduction, sulfate assimilation; LOCATED IN: chloroplast, chloroplast stroma, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Thioredoxin-independent 5'-adenylylsulphate reductase (InterPro:IPR004508), Thioredoxin fold (InterPro:IPR012335), Phosphoadenosine phosphosulphate reductase (InterPro:IPR002500), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: APS reductase 3 (TAIR:AT4G21990.1); Has 5999 Blast hits to 5419 proteins in 1658 species: Archae - 169; Bacteria - 2693; Metazoa - 1288; Fungi - 563; Plants - 600; Viruses - 0; Other Eukaryotes - 686 (source: NCBI BLink). & (gnl|cdd|35410 : 359.0) no description available & (gnl|cdd|80937 : 222.0) no description available & (reliability: 1300.0) & (original description: Putative apr, Description = Phosphoadenosine phosphosulfate reductase, PFAM = PF00085;PF01507)' T '14.2' 'S-assimilation.APR' 'nbv0.5scaffold1066_175334-181711' '(at4g04610 : 217.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.; APS reductase 1 (APR1); FUNCTIONS IN: adenylyl-sulfate reductase activity; INVOLVED IN: response to oxidative stress, sulfate reduction, sulfate assimilation; LOCATED IN: chloroplast, chloroplast stroma, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Thioredoxin-independent 5'-adenylylsulphate reductase (InterPro:IPR004508), Thioredoxin fold (InterPro:IPR012335), Phosphoadenosine phosphosulphate reductase (InterPro:IPR002500), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: APS reductase 3 (TAIR:AT4G21990.1); Has 5999 Blast hits to 5419 proteins in 1658 species: Archae - 169; Bacteria - 2693; Metazoa - 1288; Fungi - 563; Plants - 600; Viruses - 0; Other Eukaryotes - 686 (source: NCBI BLink). & (gnl|cdd|48542 : 158.0) no description available & (reliability: 434.0) & (original description: Putative apr, Description = 5'-adenylylsulfate reductase, PFAM = PF00085)' T '14.2' 'S-assimilation.APR' 'niben101scf04446_64563-69466' '(at4g04610 : 674.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.; APS reductase 1 (APR1); FUNCTIONS IN: adenylyl-sulfate reductase activity; INVOLVED IN: response to oxidative stress, sulfate reduction, sulfate assimilation; LOCATED IN: chloroplast, chloroplast stroma, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Thioredoxin-independent 5'-adenylylsulphate reductase (InterPro:IPR004508), Thioredoxin fold (InterPro:IPR012335), Phosphoadenosine phosphosulphate reductase (InterPro:IPR002500), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: APS reductase 3 (TAIR:AT4G21990.1); Has 5999 Blast hits to 5419 proteins in 1658 species: Archae - 169; Bacteria - 2693; Metazoa - 1288; Fungi - 563; Plants - 600; Viruses - 0; Other Eukaryotes - 686 (source: NCBI BLink). & (gnl|cdd|35410 : 380.0) no description available & (gnl|cdd|80937 : 246.0) no description available & (reliability: 1348.0) & (original description: Putative cysH, Description = Phosphoadenosine phosphosulfate reductase, PFAM = PF00085;PF01507)' T '14.2' 'S-assimilation.APR' 'niben101scf05438_318165-322628' '(at4g21990 : 697.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.; APS reductase 3 (APR3); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Phosphoadenosine phosphosulphate reductase (InterPro:IPR002500); BEST Arabidopsis thaliana protein match is: APS reductase 1 (TAIR:AT4G04610.1). & (gnl|cdd|35410 : 379.0) no description available & (gnl|cdd|80937 : 243.0) no description available & (reliability: 1394.0) & (original description: Putative 37712, Description = 5'-adenylylsulfate reductase 3, chloroplastic, PFAM = PF01507;PF00085)' T '14.2' 'S-assimilation.APR' 'niben101scf12197_290300-295035' '(at4g04610 : 703.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.; APS reductase 1 (APR1); FUNCTIONS IN: adenylyl-sulfate reductase activity; INVOLVED IN: response to oxidative stress, sulfate reduction, sulfate assimilation; LOCATED IN: chloroplast, chloroplast stroma, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Thioredoxin-independent 5'-adenylylsulphate reductase (InterPro:IPR004508), Thioredoxin fold (InterPro:IPR012335), Phosphoadenosine phosphosulphate reductase (InterPro:IPR002500), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: APS reductase 3 (TAIR:AT4G21990.1); Has 5999 Blast hits to 5419 proteins in 1658 species: Archae - 169; Bacteria - 2693; Metazoa - 1288; Fungi - 563; Plants - 600; Viruses - 0; Other Eukaryotes - 686 (source: NCBI BLink). & (gnl|cdd|35410 : 385.0) no description available & (gnl|cdd|80937 : 244.0) no description available & (reliability: 1406.0) & (original description: Putative 37712, Description = 5'-adenylylsulfate reductase 3, chloroplastic, PFAM = PF01507;PF00085)' T '14.2' 'S-assimilation.APR' 'niben101scf37733_1991-5195' '(at4g21990 : 621.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.; APS reductase 3 (APR3); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Phosphoadenosine phosphosulphate reductase (InterPro:IPR002500); BEST Arabidopsis thaliana protein match is: APS reductase 1 (TAIR:AT4G04610.1). & (gnl|cdd|35410 : 331.0) no description available & (gnl|cdd|80937 : 242.0) no description available & (reliability: 1242.0) & (original description: Putative apr, Description = Phosphoadenosine phosphosulfate reductase, PFAM = PF00085;PF01507)' T '14.3' 'S-assimilation.sulfite redox' 'niben101scf00487_751351-757210' '(at5g04590 : 1020.0) A.thaliana gene encoding sulfite reductase.; sulfite reductase (SIR); FUNCTIONS IN: sulfite reductase activity, sulfite reductase (ferredoxin) activity, copper ion binding; INVOLVED IN: sulfate reduction, response to salt stress, response to cold; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sulphite reductase, ferredoxin dependent (InterPro:IPR011787), Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: nitrite reductase 1 (TAIR:AT2G15620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35780 : 767.0) no description available & (gnl|cdd|30504 : 418.0) no description available & (p17847|nir_maize : 97.1) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) (Fragment) - Zea mays (Maize) & (reliability: 2040.0) & (original description: Putative SIR1, Description = Sulfite reductase 1 [ferredoxin], chloroplastic, PFAM = PF01077;PF01077;PF03460;PF03460)' T '14.3' 'S-assimilation.sulfite redox' 'niben101scf07825_631002-636995' '(at5g04590 : 1018.0) A.thaliana gene encoding sulfite reductase.; sulfite reductase (SIR); FUNCTIONS IN: sulfite reductase activity, sulfite reductase (ferredoxin) activity, copper ion binding; INVOLVED IN: sulfate reduction, response to salt stress, response to cold; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sulphite reductase, ferredoxin dependent (InterPro:IPR011787), Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: nitrite reductase 1 (TAIR:AT2G15620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35780 : 763.0) no description available & (gnl|cdd|30504 : 418.0) no description available & (p17847|nir_maize : 97.8) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) (Fragment) - Zea mays (Maize) & (reliability: 2036.0) & (original description: Putative SIR1, Description = Sulfite reductase 1 [ferredoxin], chloroplastic, PFAM = PF03460;PF03460;PF01077;PF01077)' T '14.5' 'S-assimilation.sulfite oxidase' 'niben044scf00000370ctg010_375-2914' '(at3g01910 : 204.0) Encodes a homodimeric Mo-enzyme with molybdopterin as organic component of the molybdenum cofactor. It lacks the heme domain that other eukaryotic Mo-enzymes possess and has no redox-active centers other than the molybdenum. SO protein has been found in all parts of the plant. The plant SO combines its enzymatic sulfite oxidation with a subsequent nonenzymatic step using its reaction product H2O2 as intermediate for oxidizing another molecule of sulfite.; sulfite oxidase (SOX); FUNCTIONS IN: sulfite oxidase activity; INVOLVED IN: sulfur metabolic process, response to sulfur dioxide, chlorophyll metabolic process; LOCATED IN: mitochondrion, peroxisome; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572); BEST Arabidopsis thaliana protein match is: nitrate reductase 1 (TAIR:AT1G77760.1); Has 3266 Blast hits to 3265 proteins in 737 species: Archae - 124; Bacteria - 1570; Metazoa - 141; Fungi - 268; Plants - 245; Viruses - 0; Other Eukaryotes - 918 (source: NCBI BLink). & (gnl|cdd|35755 : 163.0) no description available & (gnl|cdd|29406 : 144.0) no description available & (reliability: 408.0) & (original description: Putative suox, Description = Sulfite oxidase, PFAM = PF00174)' T '14.5' 'S-assimilation.sulfite oxidase' 'niben101scf14939_146721-176352' '(at3g01910 : 642.0) Encodes a homodimeric Mo-enzyme with molybdopterin as organic component of the molybdenum cofactor. It lacks the heme domain that other eukaryotic Mo-enzymes possess and has no redox-active centers other than the molybdenum. SO protein has been found in all parts of the plant. The plant SO combines its enzymatic sulfite oxidation with a subsequent nonenzymatic step using its reaction product H2O2 as intermediate for oxidizing another molecule of sulfite.; sulfite oxidase (SOX); FUNCTIONS IN: sulfite oxidase activity; INVOLVED IN: sulfur metabolic process, response to sulfur dioxide, chlorophyll metabolic process; LOCATED IN: mitochondrion, peroxisome; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572); BEST Arabidopsis thaliana protein match is: nitrate reductase 1 (TAIR:AT1G77760.1); Has 3266 Blast hits to 3265 proteins in 737 species: Archae - 124; Bacteria - 1570; Metazoa - 141; Fungi - 268; Plants - 245; Viruses - 0; Other Eukaryotes - 918 (source: NCBI BLink). & (gnl|cdd|35755 : 492.0) no description available & (gnl|cdd|29406 : 478.0) no description available & (p27968|nia7_horvu : 204.0) Nitrate reductase [NAD(P)H] (EC 1.7.1.2) - Hordeum vulgare (Barley) & (reliability: 1284.0) & (original description: Putative SOX, Description = Sulfite oxidase, PFAM = PF03404;PF00174)' T '14.10' 'S-assimilation.S-scavenging' '' '' '14.15' 'S-assimilation.AKN' 'niben101scf00853_448202-461529' '(o49204|kaps_catro : 399.0) Adenylyl-sulfate kinase, chloroplast precursor (EC 2.7.1.25) (APS kinase) (Adenosine-5'-phosphosulfate kinase) (ATP adenosine-5'-phosphosulfate 3'-phosphotransferase) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35854 : 346.0) no description available & (at2g14750 : 330.0) Encodes adenosine-5'-phosphosulfate kinase. Provides activated sulfate for sulfation of secondary metabolites, including the glucosinolates. Essential for pollen viability.; APS kinase (APK); CONTAINS InterPro DOMAIN/s: Adenylylsulphate kinase, C-terminal (InterPro:IPR002891); BEST Arabidopsis thaliana protein match is: APS-kinase 2 (TAIR:AT4G39940.1); Has 5042 Blast hits to 5042 proteins in 1485 species: Archae - 54; Bacteria - 2991; Metazoa - 244; Fungi - 284; Plants - 130; Viruses - 2; Other Eukaryotes - 1337 (source: NCBI BLink). & (gnl|cdd|30875 : 280.0) no description available & (reliability: 660.0) & (original description: Putative AKN, Description = Adenylyl-sulfate kinase, chloroplastic, PFAM = PF01583)' T '14.15' 'S-assimilation.AKN' 'niben101scf00991_331763-337668' '(o49204|kaps_catro : 404.0) Adenylyl-sulfate kinase, chloroplast precursor (EC 2.7.1.25) (APS kinase) (Adenosine-5'-phosphosulfate kinase) (ATP adenosine-5'-phosphosulfate 3'-phosphotransferase) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35854 : 346.0) no description available & (at2g14750 : 335.0) Encodes adenosine-5'-phosphosulfate kinase. Provides activated sulfate for sulfation of secondary metabolites, including the glucosinolates. Essential for pollen viability.; APS kinase (APK); CONTAINS InterPro DOMAIN/s: Adenylylsulphate kinase, C-terminal (InterPro:IPR002891); BEST Arabidopsis thaliana protein match is: APS-kinase 2 (TAIR:AT4G39940.1); Has 5042 Blast hits to 5042 proteins in 1485 species: Archae - 54; Bacteria - 2991; Metazoa - 244; Fungi - 284; Plants - 130; Viruses - 2; Other Eukaryotes - 1337 (source: NCBI BLink). & (gnl|cdd|30875 : 280.0) no description available & (reliability: 670.0) & (original description: Putative AKN, Description = Adenylyl-sulfate kinase, chloroplastic, PFAM = PF01583)' T '14.15' 'S-assimilation.AKN' 'niben101scf02235_524355-529173' '(at3g03900 : 355.0) Provides activated sulfate for the sulfation of secondary metabolites, including the glucosinolates. Redundant with APK4.; adenosine-5'-phosphosulfate (APS) kinase 3 (APK3); FUNCTIONS IN: transferase activity, transferring phosphorus-containing groups, kinase activity, ATP binding; INVOLVED IN: male gamete generation, sulfate assimilation; LOCATED IN: cytosol; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Adenylylsulphate kinase, C-terminal (InterPro:IPR002891); BEST Arabidopsis thaliana protein match is: APS kinase (TAIR:AT2G14750.1); Has 5006 Blast hits to 5006 proteins in 1478 species: Archae - 56; Bacteria - 2976; Metazoa - 240; Fungi - 284; Plants - 130; Viruses - 2; Other Eukaryotes - 1318 (source: NCBI BLink). & (gnl|cdd|35854 : 346.0) no description available & (o49204|kaps_catro : 313.0) Adenylyl-sulfate kinase, chloroplast precursor (EC 2.7.1.25) (APS kinase) (Adenosine-5'-phosphosulfate kinase) (ATP adenosine-5'-phosphosulfate 3'-phosphotransferase) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|30875 : 273.0) no description available & (reliability: 710.0) & (original description: Putative APK3, Description = Adenylyl-sulfate kinase 3, PFAM = PF01583)' T '14.15' 'S-assimilation.AKN' 'niben101scf04422_1577733-1582515' '(at3g03900 : 350.0) Provides activated sulfate for the sulfation of secondary metabolites, including the glucosinolates. Redundant with APK4.; adenosine-5'-phosphosulfate (APS) kinase 3 (APK3); FUNCTIONS IN: transferase activity, transferring phosphorus-containing groups, kinase activity, ATP binding; INVOLVED IN: male gamete generation, sulfate assimilation; LOCATED IN: cytosol; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Adenylylsulphate kinase, C-terminal (InterPro:IPR002891); BEST Arabidopsis thaliana protein match is: APS kinase (TAIR:AT2G14750.1); Has 5006 Blast hits to 5006 proteins in 1478 species: Archae - 56; Bacteria - 2976; Metazoa - 240; Fungi - 284; Plants - 130; Viruses - 2; Other Eukaryotes - 1318 (source: NCBI BLink). & (gnl|cdd|35854 : 342.0) no description available & (o49204|kaps_catro : 312.0) Adenylyl-sulfate kinase, chloroplast precursor (EC 2.7.1.25) (APS kinase) (Adenosine-5'-phosphosulfate kinase) (ATP adenosine-5'-phosphosulfate 3'-phosphotransferase) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|30875 : 271.0) no description available & (reliability: 700.0) & (original description: Putative APK3, Description = Adenylyl-sulfate kinase 3, PFAM = PF01583)' T '14.1001' 'Mineral Nutrition' 'sulfate' 'Mineral Nutrition' M '15' 'metal handling' 'nbv0.3scaffold585_1234-4749' '(at5g27690 : 85.1) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G19090.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative At3g06130, Description = Chloroplast-targeted copper chaperone, putative, PFAM = PF00403)' T '15' 'metal handling' 'nbv0.3scaffold2498_76061-81798' '(gnl|cdd|69230 : 813.0) no description available & (at4g14040 : 790.0) selenium-binding protein 2 (SBP2); FUNCTIONS IN: selenium binding; INVOLVED IN: polar nucleus fusion; LOCATED IN: cellular_component unknown; EXPRESSED IN: guard cell; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 (InterPro:IPR011048), Selenium-binding protein (InterPro:IPR008826); BEST Arabidopsis thaliana protein match is: selenium-binding protein 1 (TAIR:AT4G14030.2); Has 907 Blast hits to 897 proteins in 207 species: Archae - 39; Bacteria - 194; Metazoa - 215; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 379 (source: NCBI BLink). & (gnl|cdd|36136 : 774.0) no description available & (reliability: 1580.0) & (original description: Putative SBP1, Description = Selenium-binding protein 1-like protein, PFAM = PF05694)' T '15' 'metal handling' 'nbv0.3scaffold16781_1915-8597' '(at5g19140 : 376.0) AILP1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to aluminum ion; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT5G43830.1); Has 840 Blast hits to 840 proteins in 265 species: Archae - 8; Bacteria - 375; Metazoa - 14; Fungi - 0; Plants - 326; Viruses - 3; Other Eukaryotes - 114 (source: NCBI BLink). & (gnl|cdd|48483 : 340.0) no description available & (p24805|tsjt1_tobac : 132.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (reliability: 752.0) & (original description: Putative AILP1, Description = Aluminum induced protein with YGL and LRDR motifs, PFAM = PF12481)' T '15' 'metal handling' 'nbv0.3scaffold44951_11079-21570' '(at5g58640 : 246.0) Selenoprotein, Rdx type; FUNCTIONS IN: selenium binding; INVOLVED IN: cell redox homeostasis; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Selenoprotein T (InterPro:IPR019389), Selenoprotein, Rdx type (InterPro:IPR011893); BEST Arabidopsis thaliana protein match is: SELT-like protein precursor (TAIR:AT3G47300.1); Has 232 Blast hits to 232 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 137; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|38496 : 238.0) no description available & (reliability: 492.0) & (original description: Putative At3g47300, Description = SelT-like protein, PFAM = PF10262)' T '15' 'metal handling' 'nbv0.5scaffold3956_140627-151465' '(at5g58640 : 237.0) Selenoprotein, Rdx type; FUNCTIONS IN: selenium binding; INVOLVED IN: cell redox homeostasis; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Selenoprotein T (InterPro:IPR019389), Selenoprotein, Rdx type (InterPro:IPR011893); BEST Arabidopsis thaliana protein match is: SELT-like protein precursor (TAIR:AT3G47300.1); Has 232 Blast hits to 232 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 137; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|38496 : 226.0) no description available & (reliability: 474.0) & (original description: Putative At3g47300, Description = SelT-like protein, PFAM = PF10262)' T '15' 'metal handling' 'niben101scf00369_493625-497047' '(at5g27690 : 94.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G19090.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative RCOM_1433240, Description = Chloroplast-targeted copper chaperone, putative, PFAM = PF00403)' T '15' 'metal handling' 'niben101scf00594_284651-287333' '(at5g19140 : 270.0) AILP1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to aluminum ion; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT5G43830.1); Has 840 Blast hits to 840 proteins in 265 species: Archae - 8; Bacteria - 375; Metazoa - 14; Fungi - 0; Plants - 326; Viruses - 3; Other Eukaryotes - 114 (source: NCBI BLink). & (gnl|cdd|48483 : 259.0) no description available & (p24805|tsjt1_tobac : 102.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (reliability: 540.0) & (original description: Putative AILP1, Description = Stem-specific protein TSJT1, putative, expressed, PFAM = PF12481)' T '15' 'metal handling' 'niben101scf01520_469793-478233' '(at5g19140 : 378.0) AILP1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to aluminum ion; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT5G43830.1); Has 840 Blast hits to 840 proteins in 265 species: Archae - 8; Bacteria - 375; Metazoa - 14; Fungi - 0; Plants - 326; Viruses - 3; Other Eukaryotes - 114 (source: NCBI BLink). & (gnl|cdd|48483 : 338.0) no description available & (p24805|tsjt1_tobac : 132.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (reliability: 756.0) & (original description: Putative AILP1, Description = Aluminum induced protein with YGL and LRDR motifs, PFAM = PF12481)' T '15' 'metal handling' 'niben101scf02945_91517-96817' '(at4g16120 : 815.0) putative membrane-anchored cell wall protein; COBRA-like protein-7 precursor (COBL7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, Golgi apparatus, anchored to membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918); BEST Arabidopsis thaliana protein match is: COBRA-like protein 8 precursor (TAIR:AT3G16860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86733 : 288.0) no description available & (q6z4g8|cobl1_orysa : 139.0) COBRA-like 1 protein precursor (BRITTLE CULM1-like 6 protein) - Oryza sativa (Rice) & (reliability: 1504.0) & (original description: Putative COBL7, Description = COBRA-like protein 7, PFAM = PF04833)' T '15' 'metal handling' 'niben101scf03584_734054-743895' '(at4g19070 : 109.0) Putative membrane lipoprotein; Has 124 Blast hits to 75 proteins in 28 species: Archae - 2; Bacteria - 7; Metazoa - 8; Fungi - 0; Plants - 50; Viruses - 47; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative At4g19070, Description = Cadmium-induced protein AS8, PFAM = )' T '15' 'metal handling' 'niben101scf03584_741245-744022' '(at4g19070 : 111.0) Putative membrane lipoprotein; Has 124 Blast hits to 75 proteins in 28 species: Archae - 2; Bacteria - 7; Metazoa - 8; Fungi - 0; Plants - 50; Viruses - 47; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative At4g19070, Description = Cadmium-induced protein AS8, PFAM = )' T '15' 'metal handling' 'niben101scf03888_33158-39392' '(gnl|cdd|69230 : 824.0) no description available & (at4g14030 : 801.0) selenium-binding protein 1 (SBP1); FUNCTIONS IN: selenium binding; INVOLVED IN: response to cadmium ion, response to hydrogen peroxide, cellular response to selenium ion, sulfate assimilation; LOCATED IN: cellular_component unknown; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 (InterPro:IPR011048), Selenium-binding protein (InterPro:IPR008826); BEST Arabidopsis thaliana protein match is: selenium-binding protein 2 (TAIR:AT4G14040.1). & (gnl|cdd|36136 : 788.0) no description available & (reliability: 1602.0) & (original description: Putative sbp, Description = Selenium binding protein, PFAM = PF05694)' T '15' 'metal handling' 'niben101scf06677_1687-6796' '(at4g19070 : 105.0) Putative membrane lipoprotein; Has 124 Blast hits to 75 proteins in 28 species: Archae - 2; Bacteria - 7; Metazoa - 8; Fungi - 0; Plants - 50; Viruses - 47; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative Sb05g020715, Description = Putative uncharacterized protein Sb05g020715, PFAM = )' T '15' 'metal handling' 'niben101scf10524_303698-307213' '(at5g27690 : 95.9) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G19090.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative At1g23000, Description = Chloroplast-targeted copper chaperone, putative, PFAM = PF00403)' T '15' 'metal handling' 'niben101scf12954_324376-327772' '(at5g27690 : 92.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G19090.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative At5g27690, Description = Putative heavy-metal-associated domain-containing protein, PFAM = PF00403)' T '15.1' 'metal handling.acquisition' 'nbv0.3scaffold11072_14004-20858' '(at5g23980 : 796.0) Encodes a ferric chelate reductase that is expressed at low levels in roots,shoots and cotyledons, but not flowers. Its transcription is regulated by FIT1.; ferric reduction oxidase 4 (FRO4); FUNCTIONS IN: ferric-chelate reductase activity; INVOLVED IN: oxidation reduction, N-terminal protein myristoylation; LOCATED IN: endomembrane system, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), Cytochrome b245, heavy chain (InterPro:IPR000778), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 5 (TAIR:AT5G23990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35262 : 299.0) no description available & (gnl|cdd|85683 : 84.9) no description available & (reliability: 1592.0) & (original description: Putative FRO5, Description = Ferric reduction oxidase 5, PFAM = PF08030;PF01794;PF08022)' T '15.1' 'metal handling.acquisition' 'nbv0.3scaffold41893_3271-6429' '(at1g01580 : 201.0) Encodes the low-iron-inducible ferric chelate reductase responsible for reduction of iron at the root surface. It is likely to be the major Fe(III) chelate reductase in Arabidopsis iron metabolism. Coordinately regulated with IRT1, the major transporter responsible for high-affinity iron uptake from the soil, at both transcriptional and posttranscriptional levels. Steady state mRNA levels are regulated by several metals. Its transcription is regulated by FIT1.; ferric reduction oxidase 2 (FRO2); CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 1 (TAIR:AT1G01590.1); Has 2711 Blast hits to 2707 proteins in 388 species: Archae - 5; Bacteria - 307; Metazoa - 560; Fungi - 1180; Plants - 483; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|35262 : 92.0) no description available & (reliability: 402.0) & (original description: Putative FRD1, Description = Ferric reduction oxidase 2, PFAM = )' T '15.1' 'metal handling.acquisition' 'nbv0.3scaffold52884_248-6020' '(at5g49730 : 809.0) Encodes a plasma membrane-located ferric chelate reductase. Its mRNA is expressed in green aerial tissues (shoot, flower and cotyledon) in a light- and cell differentiation-specific manner.; ferric reduction oxidase 6 (FRO6); CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), Cytochrome b245, heavy chain (InterPro:IPR000778), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 7 (TAIR:AT5G49740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35262 : 303.0) no description available & (gnl|cdd|85683 : 89.9) no description available & (reliability: 1618.0) & (original description: Putative FRO7, Description = Ferric reduction oxidase 7, chloroplastic, PFAM = PF08022;PF01794;PF08030)' T '15.1' 'metal handling.acquisition' 'nbv0.5scaffold4244_130249-138153' '(at5g23980 : 716.0) Encodes a ferric chelate reductase that is expressed at low levels in roots,shoots and cotyledons, but not flowers. Its transcription is regulated by FIT1.; ferric reduction oxidase 4 (FRO4); FUNCTIONS IN: ferric-chelate reductase activity; INVOLVED IN: oxidation reduction, N-terminal protein myristoylation; LOCATED IN: endomembrane system, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), Cytochrome b245, heavy chain (InterPro:IPR000778), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 5 (TAIR:AT5G23990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35262 : 290.0) no description available & (gnl|cdd|87432 : 87.2) no description available & (reliability: 1432.0) & (original description: Putative FRO5, Description = Ferric reduction oxidase 5, PFAM = PF08022;PF01794;PF08030)' T '15.1' 'metal handling.acquisition' 'nbv0.5scaffold5236_27507-36517' '(at1g01580 : 649.0) Encodes the low-iron-inducible ferric chelate reductase responsible for reduction of iron at the root surface. It is likely to be the major Fe(III) chelate reductase in Arabidopsis iron metabolism. Coordinately regulated with IRT1, the major transporter responsible for high-affinity iron uptake from the soil, at both transcriptional and posttranscriptional levels. Steady state mRNA levels are regulated by several metals. Its transcription is regulated by FIT1.; ferric reduction oxidase 2 (FRO2); CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 1 (TAIR:AT1G01590.1); Has 2711 Blast hits to 2707 proteins in 388 species: Archae - 5; Bacteria - 307; Metazoa - 560; Fungi - 1180; Plants - 483; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|35262 : 298.0) no description available & (gnl|cdd|87432 : 86.1) no description available & (reliability: 1298.0) & (original description: Putative FRD1, Description = Ferric reduction oxidase 2, PFAM = PF08022;PF01794;PF08030)' T '15.1' 'metal handling.acquisition' 'nbv0.5scaffold5236_43537-49356' '(at1g01580 : 738.0) Encodes the low-iron-inducible ferric chelate reductase responsible for reduction of iron at the root surface. It is likely to be the major Fe(III) chelate reductase in Arabidopsis iron metabolism. Coordinately regulated with IRT1, the major transporter responsible for high-affinity iron uptake from the soil, at both transcriptional and posttranscriptional levels. Steady state mRNA levels are regulated by several metals. Its transcription is regulated by FIT1.; ferric reduction oxidase 2 (FRO2); CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 1 (TAIR:AT1G01590.1); Has 2711 Blast hits to 2707 proteins in 388 species: Archae - 5; Bacteria - 307; Metazoa - 560; Fungi - 1180; Plants - 483; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|35262 : 300.0) no description available & (gnl|cdd|87432 : 98.0) no description available & (reliability: 1476.0) & (original description: Putative FRO2, Description = Ferric reduction oxidase 2, PFAM = PF08030;PF01794;PF08022)' T '15.1' 'metal handling.acquisition' 'niben044scf00023137ctg008_1-2913' '(at1g01580 : 186.0) Encodes the low-iron-inducible ferric chelate reductase responsible for reduction of iron at the root surface. It is likely to be the major Fe(III) chelate reductase in Arabidopsis iron metabolism. Coordinately regulated with IRT1, the major transporter responsible for high-affinity iron uptake from the soil, at both transcriptional and posttranscriptional levels. Steady state mRNA levels are regulated by several metals. Its transcription is regulated by FIT1.; ferric reduction oxidase 2 (FRO2); CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 1 (TAIR:AT1G01590.1); Has 2711 Blast hits to 2707 proteins in 388 species: Archae - 5; Bacteria - 307; Metazoa - 560; Fungi - 1180; Plants - 483; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|35262 : 93.1) no description available & (reliability: 372.0) & (original description: Putative FRD1, Description = Ferric reduction oxidase 2, PFAM = )' T '15.1' 'metal handling.acquisition' 'niben044scf00029818ctg002_1-3861' '(at1g01580 : 483.0) Encodes the low-iron-inducible ferric chelate reductase responsible for reduction of iron at the root surface. It is likely to be the major Fe(III) chelate reductase in Arabidopsis iron metabolism. Coordinately regulated with IRT1, the major transporter responsible for high-affinity iron uptake from the soil, at both transcriptional and posttranscriptional levels. Steady state mRNA levels are regulated by several metals. Its transcription is regulated by FIT1.; ferric reduction oxidase 2 (FRO2); CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 1 (TAIR:AT1G01590.1); Has 2711 Blast hits to 2707 proteins in 388 species: Archae - 5; Bacteria - 307; Metazoa - 560; Fungi - 1180; Plants - 483; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|35262 : 220.0) no description available & (gnl|cdd|87432 : 88.4) no description available & (reliability: 966.0) & (original description: Putative fro1, Description = Ferric reduction oxidase 2, PFAM = PF08030;PF08022)' T '15.1' 'metal handling.acquisition' 'niben101scf02509_36895-42785' '(at3g08040 : 543.0) Encodes a member of the MATE (multidrug and toxin efflux family), expressed in roots but not shoots. Mutants accumulate excess iron, manganese and zinc, and express root Fe(III) chelatase activity even under iron sufficiency conditions. FRD3 is likely to function in root xylem loading of an iron chelator or other factor necessary for efficient iron uptake out of the xylem or apoplastic space and into leaf cells.; FERRIC REDUCTASE DEFECTIVE 3 (FRD3); CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G51340.2); Has 16442 Blast hits to 16241 proteins in 2243 species: Archae - 390; Bacteria - 12800; Metazoa - 108; Fungi - 151; Plants - 401; Viruses - 0; Other Eukaryotes - 2592 (source: NCBI BLink). & (gnl|cdd|30880 : 155.0) no description available & (gnl|cdd|36561 : 151.0) no description available & (reliability: 1086.0) & (original description: Putative DTX42, Description = Protein DETOXIFICATION 42, PFAM = PF01554;PF01554)' T '15.1' 'metal handling.acquisition' 'niben101scf03005_399650-405292' '(at3g08040 : 544.0) Encodes a member of the MATE (multidrug and toxin efflux family), expressed in roots but not shoots. Mutants accumulate excess iron, manganese and zinc, and express root Fe(III) chelatase activity even under iron sufficiency conditions. FRD3 is likely to function in root xylem loading of an iron chelator or other factor necessary for efficient iron uptake out of the xylem or apoplastic space and into leaf cells.; FERRIC REDUCTASE DEFECTIVE 3 (FRD3); CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G51340.2); Has 16442 Blast hits to 16241 proteins in 2243 species: Archae - 390; Bacteria - 12800; Metazoa - 108; Fungi - 151; Plants - 401; Viruses - 0; Other Eukaryotes - 2592 (source: NCBI BLink). & (gnl|cdd|30880 : 156.0) no description available & (gnl|cdd|36561 : 150.0) no description available & (reliability: 1088.0) & (original description: Putative DTX43, Description = Protein DETOXIFICATION 43, PFAM = PF01554;PF01554)' T '15.1' 'metal handling.acquisition' 'niben101scf03021_287256-314641' '(at5g49730 : 802.0) Encodes a plasma membrane-located ferric chelate reductase. Its mRNA is expressed in green aerial tissues (shoot, flower and cotyledon) in a light- and cell differentiation-specific manner.; ferric reduction oxidase 6 (FRO6); CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), Cytochrome b245, heavy chain (InterPro:IPR000778), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 7 (TAIR:AT5G49740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35262 : 303.0) no description available & (gnl|cdd|85683 : 89.5) no description available & (reliability: 1604.0) & (original description: Putative FRO3, Description = Ferric-chelate reductase, putative, PFAM = PF08030;PF01794;PF08022)' T '15.1' 'metal handling.acquisition' 'niben101scf03021_287906-293317' '(at5g49730 : 837.0) Encodes a plasma membrane-located ferric chelate reductase. Its mRNA is expressed in green aerial tissues (shoot, flower and cotyledon) in a light- and cell differentiation-specific manner.; ferric reduction oxidase 6 (FRO6); CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), Cytochrome b245, heavy chain (InterPro:IPR000778), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 7 (TAIR:AT5G49740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35262 : 309.0) no description available & (gnl|cdd|85683 : 91.1) no description available & (reliability: 1674.0) & (original description: Putative FRO7, Description = Ferric reduction oxidase 7, chloroplastic, PFAM = PF08022;PF01794;PF08030)' T '15.1' 'metal handling.acquisition' 'niben101scf03114_831323-839916' '(at5g23990 : 330.0) Encodes a ferric chelate reductase that is expressed at low levels in roots,shoots and flowers, but not cotyledons.; ferric reduction oxidase 5 (FRO5); FUNCTIONS IN: ferric-chelate reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: shoot, flower; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 4 (TAIR:AT5G23980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 660.0) & (original description: Putative fro1, Description = Ferric-chelate reductase, PFAM = PF08030)' T '15.1' 'metal handling.acquisition' 'niben101scf07576_190352-197157' '(at1g01580 : 751.0) Encodes the low-iron-inducible ferric chelate reductase responsible for reduction of iron at the root surface. It is likely to be the major Fe(III) chelate reductase in Arabidopsis iron metabolism. Coordinately regulated with IRT1, the major transporter responsible for high-affinity iron uptake from the soil, at both transcriptional and posttranscriptional levels. Steady state mRNA levels are regulated by several metals. Its transcription is regulated by FIT1.; ferric reduction oxidase 2 (FRO2); CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 1 (TAIR:AT1G01590.1); Has 2711 Blast hits to 2707 proteins in 388 species: Archae - 5; Bacteria - 307; Metazoa - 560; Fungi - 1180; Plants - 483; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|35262 : 313.0) no description available & (gnl|cdd|87432 : 98.4) no description available & (reliability: 1502.0) & (original description: Putative FRO2, Description = Ferric reduction oxidase 2, PFAM = PF01794;PF08022;PF08030)' T '15.1' 'metal handling.acquisition' 'niben101scf22566_21955-24191' '(at3g15352 : 88.6) Encodes protein similar to yeast COX17, a copper-binding protein that mediates the delivery of Cu to the mitochondria for the assembly of a functional cytochrome oxidase complex.; cytochrome c oxidase 17 (COX17); FUNCTIONS IN: copper chaperone activity; INVOLVED IN: response to bacterium, response to copper ion; LOCATED IN: mitochondrial intermembrane space; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase copper chaperone (InterPro:IPR007745); BEST Arabidopsis thaliana protein match is: Cytochrome C oxidase copper chaperone (COX17) (TAIR:AT1G53030.1); Has 294 Blast hits to 294 proteins in 132 species: Archae - 0; Bacteria - 0; Metazoa - 138; Fungi - 51; Plants - 55; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative cox17, Description = Cytochrome c oxidase copper chaperone, PFAM = PF05051)' T '15.2' 'metal handling.binding, chelation and storage' 'nbv0.3scaffold15751_16932-26171' '(at5g50740 : 155.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: farnesylated protein 3 (TAIR:AT5G63530.2). & (reliability: 310.0) & (original description: Putative COR78, Description = Cold regulated protein, PFAM = PF00403;PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'nbv0.3scaffold22337_26867-31343' '(q9spv5|nec1_nicpl : 316.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g62020 : 279.0) germin-like protein (GLP10); germin-like protein 10 (GLP10); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein subfamily 2 member 2 precursor (TAIR:AT1G02335.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84597 : 111.0) no description available & (reliability: 542.0) & (original description: Putative NECI, Description = Nectarin-1, PFAM = PF00190)' T '15.2' 'metal handling.binding, chelation and storage' 'nbv0.3scaffold23944_1945-5598' '(q9spv5|nec1_nicpl : 297.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g62020 : 268.0) germin-like protein (GLP10); germin-like protein 10 (GLP10); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein subfamily 2 member 2 precursor (TAIR:AT1G02335.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84597 : 107.0) no description available & (reliability: 514.0) & (original description: Putative Os05g0277500, Description = Germin-like protein 5-1, PFAM = PF00190)' T '15.2' 'metal handling.binding, chelation and storage' 'nbv0.3scaffold25706_12125-16600' '(at5g24580 : 222.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: copper ion binding, metal ion binding; INVOLVED IN: copper ion transport, metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G50740.1); Has 553 Blast hits to 416 proteins in 80 species: Archae - 0; Bacteria - 22; Metazoa - 98; Fungi - 42; Plants - 238; Viruses - 27; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 444.0) & (original description: Putative BnaA06g27030D, Description = BnaA06g27030D protein, PFAM = PF00403;PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'nbv0.3scaffold93227_198-4759' '(q8h1t3|fri2_tobac : 449.0) Ferritin-2, chloroplast precursor (EC 1.16.3.1) (NtFer2) - Nicotiana tabacum (Common tobacco) & (at2g40300 : 335.0) Encodes FERRITIN 4, AtFER4. Ferritins are a class of 24-mer multi-meric proteins found in all kingdoms of life. Function as the main iron store in mammals. Evidence suggests that Arabidopsis ferritins are essential to protect cells against oxidative damage, but they do not constitute the major iron pool. Localize to mitochondria. Knock out mutants are not sensitive to abiotic stress.; ferritin 4 (FER4); FUNCTIONS IN: oxidoreductase activity, ferric iron binding, binding, transition metal ion binding; INVOLVED IN: in 8 processes; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferritin, N-terminal (InterPro:IPR001519), Ferritin-related (InterPro:IPR012347), Ferritin-like (InterPro:IPR009040), Ferritin, conserved site (InterPro:IPR014034), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Ferritin/Dps protein (InterPro:IPR008331); BEST Arabidopsis thaliana protein match is: ferritin 3 (TAIR:AT3G56090.1); Has 4634 Blast hits to 4632 proteins in 1342 species: Archae - 173; Bacteria - 2136; Metazoa - 1697; Fungi - 13; Plants - 350; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink). & (gnl|cdd|37543 : 219.0) no description available & (gnl|cdd|29783 : 212.0) no description available & (reliability: 670.0) & (original description: Putative FER2, Description = Ferritin-2, chloroplastic, PFAM = PF00210)' T '15.2' 'metal handling.binding, chelation and storage' 'nbv0.5scaffold838_266243-269776' '(q9spv5|nec1_nicpl : 225.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 207.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 96.1) no description available & (reliability: 406.0) & (original description: Putative NECI, Description = Nectarin-1, PFAM = PF00190)' T '15.2' 'metal handling.binding, chelation and storage' 'nbv0.5scaffold2877_71019-75805' '(at1g66240 : 106.0) homolog of anti-oxidant 1 (ATX1); LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 212.0) & (original description: Putative ATX1, Description = Copper transport protein ATX1, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'nbv0.5scaffold2958_27021-31662' '(at2g37390 : 121.0) Chloroplast-targeted copper chaperone protein; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Chloroplast-targeted copper chaperone protein (TAIR:AT3G53530.1). & (reliability: 242.0) & (original description: Putative BnaA04g21380D, Description = BnaA04g21380D protein, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'nbv0.5scaffold6018_79796-84013' '(at2g18196 : 233.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT4G10465.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative BnaA07g15730D, Description = BnaA07g15730D protein, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'nbv0.5scaffold6310_15374-19372' '(at5g24580 : 181.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: copper ion binding, metal ion binding; INVOLVED IN: copper ion transport, metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G50740.1); Has 553 Blast hits to 416 proteins in 80 species: Archae - 0; Bacteria - 22; Metazoa - 98; Fungi - 42; Plants - 238; Viruses - 27; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative BnaA06g27030D, Description = BnaA06g27030D protein, PFAM = PF00403;PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben044scf00000729ctg003_220-2999' '(at1g30470 : 97.8) SIT4 phosphatase-associated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: SIT4 phosphatase-associated protein (InterPro:IPR007587); BEST Arabidopsis thaliana protein match is: SIT4 phosphatase-associated family protein (TAIR:AT3G45190.1). & (reliability: 195.6) & (original description: Putative BnaA09g26080D, Description = BnaA09g26080D protein, PFAM = )' T '15.2' 'metal handling.binding, chelation and storage' 'niben044scf00010135ctg006_64849-67760' '(at1g71050 : 175.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G22990.1); Has 1285 Blast hits to 1219 proteins in 68 species: Archae - 2; Bacteria - 24; Metazoa - 2; Fungi - 25; Plants - 1232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative HIPP20, Description = Heavy metal-associated isoprenylated plant protein 20, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben044scf00011374ctg017_1-1982' '(q9spv5|nec1_nicpl : 207.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 189.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 99.0) no description available & (reliability: 376.0) & (original description: Putative Ger, Description = Germin-like protein, PFAM = PF00190)' T '15.2' 'metal handling.binding, chelation and storage' 'niben044scf00013721ctg020_65-3618' '(p48498|metk_pethy : 740.0) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase) - Petunia hybrida (Petunia) & (at2g36880 : 715.0) methionine adenosyltransferase 3 (MAT3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase family protein (TAIR:AT3G17390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36719 : 674.0) no description available & (gnl|cdd|81480 : 610.0) no description available & (reliability: 1430.0) & (original description: Putative SAM3, Description = S-adenosylmethionine synthase 3, PFAM = PF02773;PF00438;PF02772)' T '15.2' 'metal handling.binding, chelation and storage' 'niben044scf00016613ctg008_1314-4675' '(q96552|metl_catro : 740.0) S-adenosylmethionine synthetase 2 (EC 2.5.1.6) (Methionine adenosyltransferase 2) (AdoMet synthetase 2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g17390 : 724.0) S-adenosylmethionine synthetase; METHIONINE OVER-ACCUMULATOR 3 (MTO3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: lignin biosynthetic process, response to cold, methionine metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: nucleolus, cell wall, plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 1 (TAIR:AT1G02500.2); Has 10856 Blast hits to 10849 proteins in 2868 species: Archae - 12; Bacteria - 5440; Metazoa - 373; Fungi - 167; Plants - 707; Viruses - 1; Other Eukaryotes - 4156 (source: NCBI BLink). & (gnl|cdd|36719 : 679.0) no description available & (gnl|cdd|81480 : 606.0) no description available & (reliability: 1448.0) & (original description: Putative SAMS2, Description = S-adenosylmethionine synthase 2, PFAM = PF02772;PF02773;PF00438)' T '15.2' 'metal handling.binding, chelation and storage' 'niben044scf00018717ctg003_1-3068' '(at3g13110 : 259.0) Encodes a mitochondrial serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.; serine acetyltransferase 2;2 (SERAT2;2); FUNCTIONS IN: zinc ion binding, serine O-acetyltransferase activity; INVOLVED IN: response to cadmium ion, cysteine biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: serine acetyltransferase 2;1 (TAIR:AT1G55920.1); Has 25521 Blast hits to 25511 proteins in 2666 species: Archae - 387; Bacteria - 19255; Metazoa - 8; Fungi - 225; Plants - 240; Viruses - 18; Other Eukaryotes - 5388 (source: NCBI BLink). & (gnl|cdd|39947 : 214.0) no description available & (gnl|cdd|83739 : 171.0) no description available & (reliability: 508.0) & (original description: Putative cysE, Description = Serine acetyltransferase, PFAM = PF06426)' T '15.2' 'metal handling.binding, chelation and storage' 'niben044scf00027922ctg000_1-4340' '(at2g18196 : 207.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT4G10465.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative BnaA07g15730D, Description = BnaA07g15730D protein, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf00133_103110-106979' '(q8rx97|fri1_tobac : 449.0) Ferritin-1, chloroplast precursor (EC 1.16.3.1) (NtFer1) - Nicotiana tabacum (Common tobacco) & (at2g40300 : 322.0) Encodes FERRITIN 4, AtFER4. Ferritins are a class of 24-mer multi-meric proteins found in all kingdoms of life. Function as the main iron store in mammals. Evidence suggests that Arabidopsis ferritins are essential to protect cells against oxidative damage, but they do not constitute the major iron pool. Localize to mitochondria. Knock out mutants are not sensitive to abiotic stress.; ferritin 4 (FER4); FUNCTIONS IN: oxidoreductase activity, ferric iron binding, binding, transition metal ion binding; INVOLVED IN: in 8 processes; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferritin, N-terminal (InterPro:IPR001519), Ferritin-related (InterPro:IPR012347), Ferritin-like (InterPro:IPR009040), Ferritin, conserved site (InterPro:IPR014034), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Ferritin/Dps protein (InterPro:IPR008331); BEST Arabidopsis thaliana protein match is: ferritin 3 (TAIR:AT3G56090.1); Has 4634 Blast hits to 4632 proteins in 1342 species: Archae - 173; Bacteria - 2136; Metazoa - 1697; Fungi - 13; Plants - 350; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink). & (gnl|cdd|29783 : 214.0) no description available & (gnl|cdd|37543 : 212.0) no description available & (reliability: 644.0) & (original description: Putative FER1, Description = Ferritin-1, chloroplastic, PFAM = PF00210)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf00285_49111-52280' '(p48498|metk_pethy : 741.0) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase) - Petunia hybrida (Petunia) & (at2g36880 : 716.0) methionine adenosyltransferase 3 (MAT3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase family protein (TAIR:AT3G17390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36719 : 674.0) no description available & (gnl|cdd|81480 : 611.0) no description available & (reliability: 1432.0) & (original description: Putative SAM3, Description = S-adenosylmethionine synthase 3, PFAM = PF02772;PF02773;PF00438)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf00308_109613-113223' '(at4g27590 : 127.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: copper ion binding, metal ion binding; INVOLVED IN: copper ion transport, metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT3G56891.1); Has 739 Blast hits to 739 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 735; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative At4g27590, Description = Heavy metal associated domain-containing protein, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf00308_117552-122734' '(at5g24580 : 227.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: copper ion binding, metal ion binding; INVOLVED IN: copper ion transport, metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G50740.1); Has 553 Blast hits to 416 proteins in 80 species: Archae - 0; Bacteria - 22; Metazoa - 98; Fungi - 42; Plants - 238; Viruses - 27; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative BnaC02g41180D, Description = BnaC02g41180D protein, PFAM = PF00403;PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf00332_899102-902052' '(gnl|cdd|66715 : 440.0) no description available & (at1g09240 : 382.0) Encodes a nicotianamine synthase.; nicotianamine synthase 3 (NAS3); CONTAINS InterPro DOMAIN/s: Nicotianamine synthase (InterPro:IPR004298); BEST Arabidopsis thaliana protein match is: nicotianamine synthase 4 (TAIR:AT1G56430.1); Has 198 Blast hits to 195 proteins in 46 species: Archae - 20; Bacteria - 10; Metazoa - 0; Fungi - 20; Plants - 147; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (q9fxw5|nas3_orysa : 311.0) Nicotianamine synthase 3 (EC 2.5.1.43) (S-adenosyl-L-methionine:S-adenosyl-L-methionine:S-adenosyl-methionine 3-amino-3-carboxypropyltransferase 3) (OsNAS3) - Oryza sativa (Rice) & (reliability: 764.0) & (original description: Putative CHLN, Description = Nicotianamine synthase, PFAM = PF03059)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf00402_434738-437916' '(q96551|metk_catro : 745.0) S-adenosylmethionine synthetase 1 (EC 2.5.1.6) (Methionine adenosyltransferase 1) (AdoMet synthetase 1) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g01850 : 729.0) S-adenosylmethionine synthetase 2 (SAM-2); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 1 (TAIR:AT1G02500.2); Has 10906 Blast hits to 10898 proteins in 2898 species: Archae - 12; Bacteria - 5497; Metazoa - 373; Fungi - 167; Plants - 706; Viruses - 1; Other Eukaryotes - 4150 (source: NCBI BLink). & (gnl|cdd|36719 : 683.0) no description available & (gnl|cdd|81480 : 611.0) no description available & (reliability: 1452.0) & (original description: Putative SAMS2, Description = S-adenosylmethionine synthase 2, PFAM = PF02773;PF00438;PF02772)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf00669_74407-79688' '(at2g37390 : 133.0) Chloroplast-targeted copper chaperone protein; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Chloroplast-targeted copper chaperone protein (TAIR:AT3G53530.1). & (reliability: 266.0) & (original description: Putative BnaA04g21380D, Description = BnaA04g21380D protein, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf01237_328355-340368' '(q8h1t3|fri2_tobac : 449.0) Ferritin-2, chloroplast precursor (EC 1.16.3.1) (NtFer2) - Nicotiana tabacum (Common tobacco) & (at2g40300 : 336.0) Encodes FERRITIN 4, AtFER4. Ferritins are a class of 24-mer multi-meric proteins found in all kingdoms of life. Function as the main iron store in mammals. Evidence suggests that Arabidopsis ferritins are essential to protect cells against oxidative damage, but they do not constitute the major iron pool. Localize to mitochondria. Knock out mutants are not sensitive to abiotic stress.; ferritin 4 (FER4); FUNCTIONS IN: oxidoreductase activity, ferric iron binding, binding, transition metal ion binding; INVOLVED IN: in 8 processes; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferritin, N-terminal (InterPro:IPR001519), Ferritin-related (InterPro:IPR012347), Ferritin-like (InterPro:IPR009040), Ferritin, conserved site (InterPro:IPR014034), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Ferritin/Dps protein (InterPro:IPR008331); BEST Arabidopsis thaliana protein match is: ferritin 3 (TAIR:AT3G56090.1); Has 4634 Blast hits to 4632 proteins in 1342 species: Archae - 173; Bacteria - 2136; Metazoa - 1697; Fungi - 13; Plants - 350; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink). & (gnl|cdd|37543 : 219.0) no description available & (gnl|cdd|29783 : 211.0) no description available & (reliability: 672.0) & (original description: Putative FER2, Description = Ferritin-2, chloroplastic, PFAM = PF00210)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf01640_429927-433465' '(at1g22990 : 172.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G71050.1); Has 1142 Blast hits to 1079 proteins in 46 species: Archae - 2; Bacteria - 2; Metazoa - 2; Fungi - 13; Plants - 1123; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative fp2, Description = Farnesylated protein 2, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf01664_318270-321077' '(at4g38580 : 207.0) putative farnesylated protein (At4g38580) mRNA, complete; farnesylated protein 6 (FP6); FUNCTIONS IN: metal ion binding; INVOLVED IN: heat acclimation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT4G35060.1); Has 1169 Blast hits to 1088 proteins in 38 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative HIPP26, Description = Heavy metal-associated isoprenylated plant protein 26, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf01710_143288-146366' '(at1g06330 : 159.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: copper ion binding, metal ion binding; INVOLVED IN: copper ion transport, metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G18196.1); Has 1362 Blast hits to 1319 proteins in 117 species: Archae - 0; Bacteria - 114; Metazoa - 22; Fungi - 14; Plants - 1212; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative Sb03g035070, Description = Putative uncharacterized protein Sb03g035070, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf01775_130911-135651' '(q9spv5|nec1_nicpl : 276.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g62020 : 237.0) germin-like protein (GLP10); germin-like protein 10 (GLP10); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein subfamily 2 member 2 precursor (TAIR:AT1G02335.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84597 : 104.0) no description available & (reliability: 462.0) & (original description: Putative NECI, Description = Nectarin-1, PFAM = PF00190)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf01820_53714-56892' '(q96552|metl_catro : 742.0) S-adenosylmethionine synthetase 2 (EC 2.5.1.6) (Methionine adenosyltransferase 2) (AdoMet synthetase 2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g02500 : 735.0) encodes a S-adenosylmethionine synthetase. SAM1 is regulated by protein S-nitrosylation. The covalent binding of nitric oxide (NO) to the Cys114 residue inhibits the enzyme activity.; S-adenosylmethionine synthetase 1 (SAM1); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: response to cadmium ion, response to salt stress, ethylene biosynthetic process, S-adenosylmethionine biosynthetic process; LOCATED IN: cell wall, plasma membrane, membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 2 (TAIR:AT4G01850.2); Has 10905 Blast hits to 10897 proteins in 2898 species: Archae - 12; Bacteria - 5497; Metazoa - 373; Fungi - 167; Plants - 706; Viruses - 1; Other Eukaryotes - 4149 (source: NCBI BLink). & (gnl|cdd|36719 : 682.0) no description available & (gnl|cdd|81480 : 607.0) no description available & (reliability: 1448.0) & (original description: Putative METK5, Description = S-adenosylmethionine synthase 5, PFAM = PF02772;PF00438;PF02773)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf01870_943990-946883' '(at4g08570 : 178.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121), Heavy-metal-associated, conserved site (InterPro:IPR017969); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G22990.1); Has 1185 Blast hits to 1127 proteins in 62 species: Archae - 2; Bacteria - 41; Metazoa - 2; Fungi - 0; Plants - 1133; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative fp2, Description = Heavy metal transport/detoxification superfamily protein, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf01920_17614-22902' '(at1g66240 : 107.0) homolog of anti-oxidant 1 (ATX1); LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 214.0) & (original description: Putative ATX1, Description = Copper transport protein ATX1, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf02128_85826-89055' '(at5g02600 : 99.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Chloroplast-targeted copper chaperone protein (TAIR:AT2G37390.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative NAKR3, Description = Chloroplast-targeted copper chaperone protein, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf02245_247245-250072' '(at1g22990 : 170.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G71050.1); Has 1142 Blast hits to 1079 proteins in 46 species: Archae - 2; Bacteria - 2; Metazoa - 2; Fungi - 13; Plants - 1123; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative HIPP22, Description = Heavy metal-associated isoprenylated plant protein 22, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf02486_300337-303358' '(q9spv5|nec1_nicpl : 218.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 201.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 89.2) no description available & (reliability: 386.0) & (original description: Putative GER1, Description = Germin-like protein, PFAM = PF00190)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf02486_300376-350936' '(q9spv5|nec1_nicpl : 213.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 199.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 90.0) no description available & (reliability: 388.0) & (original description: Putative GER1, Description = Germin-like protein, PFAM = PF00190)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf02486_345604-348861' '(q9spv5|nec1_nicpl : 231.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 217.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 98.8) no description available & (reliability: 414.0) & (original description: Putative NECI, Description = Nectarin-1, PFAM = PF00190)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf02486_345640-348927' '(q9spv5|nec1_nicpl : 228.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 216.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 97.7) no description available & (reliability: 420.0) & (original description: Putative GER1, Description = Germin-like protein, PFAM = PF00190)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf02502_472907-476076' '(p48498|metk_pethy : 744.0) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase) - Petunia hybrida (Petunia) & (at2g36880 : 719.0) methionine adenosyltransferase 3 (MAT3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase family protein (TAIR:AT3G17390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36719 : 673.0) no description available & (gnl|cdd|81480 : 608.0) no description available & (reliability: 1438.0) & (original description: Putative SAM3, Description = S-adenosylmethionine synthase 3, PFAM = PF02772;PF00438;PF02773)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf02513_984212-987412' '(at5g02600 : 99.4) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Chloroplast-targeted copper chaperone protein (TAIR:AT2G37390.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative PGSC0003DMG400012592, Description = Metal ion binding protein, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf02621_468891-474671' '(at4g38580 : 245.0) putative farnesylated protein (At4g38580) mRNA, complete; farnesylated protein 6 (FP6); FUNCTIONS IN: metal ion binding; INVOLVED IN: heat acclimation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT4G35060.1); Has 1169 Blast hits to 1088 proteins in 38 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 490.0) & (original description: Putative HIPP26, Description = Heavy metal-associated isoprenylated plant protein 26, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf02714_566608-569954' '(q9spv5|nec1_nicpl : 404.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g62020 : 259.0) germin-like protein (GLP10); germin-like protein 10 (GLP10); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein subfamily 2 member 2 precursor (TAIR:AT1G02335.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84597 : 111.0) no description available & (reliability: 506.0) & (original description: Putative NECI, Description = Nectarin-1, PFAM = PF00190)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf02983_278842-282129' '(at4g27590 : 146.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: copper ion binding, metal ion binding; INVOLVED IN: copper ion transport, metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT3G56891.1); Has 739 Blast hits to 739 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 735; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative BnaA01g16590D, Description = BnaA01g16590D protein, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf03026_395193-398396' '(at4g39700 : 170.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G22990.1); Has 1218 Blast hits to 1176 proteins in 83 species: Archae - 0; Bacteria - 23; Metazoa - 6; Fungi - 46; Plants - 1141; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative fp2, Description = Heavy metal transport/detoxification superfamily protein, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf03160_284367-286264' '(at3g62020 : 127.0) germin-like protein (GLP10); germin-like protein 10 (GLP10); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein subfamily 2 member 2 precursor (TAIR:AT1G02335.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9s8p4|rhre_pea : 127.0) Rhicadhesin receptor precursor (Germin-like protein) - Pisum sativum (Garden pea) & (gnl|cdd|84597 : 86.5) no description available & (reliability: 250.0) & (original description: Putative Os09g0568600, Description = Putative germin-like protein 9-2, PFAM = PF00190)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf03160_286265-288171' '(at1g02335 : 119.0) germin-like protein subfamily 2 member 2 precursor (GL22); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; LOCATED IN: endomembrane system, apoplast; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 2264 Blast hits to 2183 proteins in 312 species: Archae - 0; Bacteria - 520; Metazoa - 1; Fungi - 98; Plants - 1608; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (q9spv5|nec1_nicpl : 116.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|84597 : 80.3) no description available & (reliability: 238.0) & (original description: Putative Os09g0568700, Description = Germin-like protein 9-3, PFAM = PF00190)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf03309_791377-796187' '(at1g06330 : 137.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: copper ion binding, metal ion binding; INVOLVED IN: copper ion transport, metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G18196.1); Has 1362 Blast hits to 1319 proteins in 117 species: Archae - 0; Bacteria - 114; Metazoa - 22; Fungi - 14; Plants - 1212; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|36816 : 80.8) no description available & (reliability: 274.0) & (original description: Putative Sb03g035070, Description = Putative uncharacterized protein Sb03g035070, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf03576_274067-277750' '(at5g63530 : 184.0) Farnesylated protein that binds metals.; farnesylated protein 3 (FP3); FUNCTIONS IN: transition metal ion binding, metal ion binding; INVOLVED IN: cellular transition metal ion homeostasis; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G50740.1); Has 5078 Blast hits to 3127 proteins in 372 species: Archae - 4; Bacteria - 284; Metazoa - 1364; Fungi - 240; Plants - 2332; Viruses - 113; Other Eukaryotes - 741 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative HMA, Description = Metal ion binding, PFAM = PF00403;PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf04643_198484-201653' '(p48498|metk_pethy : 752.0) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase) - Petunia hybrida (Petunia) & (at2g36880 : 721.0) methionine adenosyltransferase 3 (MAT3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase family protein (TAIR:AT3G17390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36719 : 674.0) no description available & (gnl|cdd|81480 : 610.0) no description available & (reliability: 1442.0) & (original description: Putative SAM3, Description = S-adenosylmethionine synthase 3, PFAM = PF00438;PF02773;PF02772)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf04841_142014-144856' '(at1g71050 : 176.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G22990.1); Has 1285 Blast hits to 1219 proteins in 68 species: Archae - 2; Bacteria - 24; Metazoa - 2; Fungi - 25; Plants - 1232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative HIPP20, Description = Heavy metal-associated isoprenylated plant protein 20, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf05283_35366-54200' '(at1g30470 : 829.0) SIT4 phosphatase-associated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: SIT4 phosphatase-associated protein (InterPro:IPR007587); BEST Arabidopsis thaliana protein match is: SIT4 phosphatase-associated family protein (TAIR:AT3G45190.1). & (gnl|cdd|37284 : 491.0) no description available & (gnl|cdd|68084 : 321.0) no description available & (reliability: 1658.0) & (original description: Putative At1g30470, Description = SIT4 phosphatase-associated family protein, PFAM = PF04499;PF04499)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf05516_453639-465842' '(at5g44070 : 619.0) Phytochelatin synthase gene confers tolerance to cadmium ions. Catalyzes phytochelatin (PC) synthesis from glutathione (GSH) in the presence of Cd2+, Zn2+, Cu2+ and Fe3+, but not by Co2+ or Ni2+.; CADMIUM SENSITIVE 1 (CAD1); FUNCTIONS IN: cadmium ion binding, copper ion binding, glutathione gamma-glutamylcysteinyltransferase activity; INVOLVED IN: in 6 processes; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phytochelatin synthase, C-terminal (InterPro:IPR015407), Phytochelatin synthase (InterPro:IPR007719); BEST Arabidopsis thaliana protein match is: phytochelatin synthase 2 (TAIR:AT1G03980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35851 : 462.0) no description available & (gnl|cdd|68592 : 243.0) no description available & (reliability: 1238.0) & (original description: Putative pcs8, Description = Phytochelatin synthase, PFAM = PF05023;PF09328)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf05581_77687-80874' '(at1g55920 : 399.0) Encodes a chloroplast/cytosol localized serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.; serine acetyltransferase 2;1 (SERAT2;1); FUNCTIONS IN: serine O-acetyltransferase activity; INVOLVED IN: cellular response to sulfate starvation, response to cold; LOCATED IN: cytosol, chloroplast, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: serine acetyltransferase 2;2 (TAIR:AT3G13110.1); Has 24449 Blast hits to 24415 proteins in 2638 species: Archae - 407; Bacteria - 18561; Metazoa - 8; Fungi - 223; Plants - 250; Viruses - 18; Other Eukaryotes - 4982 (source: NCBI BLink). & (gnl|cdd|39947 : 347.0) no description available & (gnl|cdd|83739 : 281.0) no description available & (reliability: 798.0) & (original description: Putative sat1, Description = Serine acetyltransferase 1, PFAM = PF00132;PF06426)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf05764_389845-399131' '(at4g36390 : 859.0) Methylthiotransferase; FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, iron-sulfur cluster binding, transferase activity, catalytic activity; INVOLVED IN: RNA modification, tRNA modification; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methylthiotransferase (InterPro:IPR005839), tRNA-i(6)A37 modification enzyme MiaB (InterPro:IPR006463), Methylthiotransferase, conserved site (InterPro:IPR020612), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Methylthiotransferase, N-terminal (InterPro:IPR013848), Radical SAM (InterPro:IPR007197), Deoxyribonuclease/rho motif-related TRAM (InterPro:IPR002792); BEST Arabidopsis thaliana protein match is: Methylthiotransferase (TAIR:AT1G72090.1); Has 15610 Blast hits to 15591 proteins in 2425 species: Archae - 356; Bacteria - 9631; Metazoa - 288; Fungi - 1; Plants - 108; Viruses - 0; Other Eukaryotes - 5226 (source: NCBI BLink). & (q2r1u4|ck5p1_orysa : 854.0) CDK5RAP1-like protein - Oryza sativa (Rice) & (gnl|cdd|37703 : 689.0) no description available & (gnl|cdd|30966 : 398.0) no description available & (reliability: 1718.0) & (original description: Putative miaB, Description = CDK5RAP1-like protein, PFAM = PF00919;PF04055;PF01938)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf05932_378488-381730' '(q9spv5|nec1_nicpl : 305.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 260.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 106.0) no description available & (reliability: 516.0) & (original description: Putative NECI, Description = Nectarin-1, PFAM = PF00190)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf05932_489418-494972' '(q9spv5|nec1_nicpl : 233.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 215.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 101.0) no description available & (reliability: 418.0) & (original description: Putative GER1, Description = Germin-like protein, PFAM = PF00190)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf05932_489562-522189' '(q9spv5|nec1_nicpl : 229.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 211.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 99.6) no description available & (reliability: 422.0) & (original description: Putative GER1, Description = Germin-like protein, PFAM = PF00190)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf06423_30036-101048' '(at5g50740 : 92.4) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: farnesylated protein 3 (TAIR:AT5G63530.2). & (reliability: 184.8) & (original description: Putative FP3, Description = Heavy metal transport/detoxification superfamily protein, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf06423_97702-107242' '(at5g50740 : 115.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: farnesylated protein 3 (TAIR:AT5G63530.2). & (reliability: 230.0) & (original description: Putative FP3, Description = Heavy metal transport/detoxification superfamily protein, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf06516_531066-536535' '(at2g33740 : 204.0) encodes a copper binding protein that forms tetramers in vitro. Gene is expressed in all tissues examined and protein is localized to the chloroplast.; CUTA; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to metal ion; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Divalent ion tolerance protein, CutA1 (InterPro:IPR004323), Nitrogen regulatory PII-like, alpha/beta (InterPro:IPR011322); Has 2474 Blast hits to 2474 proteins in 915 species: Archae - 144; Bacteria - 1534; Metazoa - 199; Fungi - 5; Plants - 49; Viruses - 0; Other Eukaryotes - 543 (source: NCBI BLink). & (gnl|cdd|38548 : 144.0) no description available & (gnl|cdd|79985 : 138.0) no description available & (reliability: 408.0) & (original description: Putative CUTA, Description = Protein CutA, chloroplastic, PFAM = PF03091)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf06551_35551-39597' '(at4g39700 : 162.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G22990.1); Has 1218 Blast hits to 1176 proteins in 83 species: Archae - 0; Bacteria - 23; Metazoa - 6; Fungi - 46; Plants - 1141; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative fp2, Description = Heavy metal transport/detoxification superfamily protein, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf07036_108654-111138' '(at2g18196 : 206.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT4G10465.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative BnaC06g21490D, Description = BnaC06g21490D protein, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf07236_39501-48466' '(at5g50740 : 171.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: farnesylated protein 3 (TAIR:AT5G63530.2). & (reliability: 342.0) & (original description: Putative COR78, Description = Cold regulated protein, PFAM = PF00403;PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf08149_347291-351038' '(at5g50740 : 187.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: farnesylated protein 3 (TAIR:AT5G63530.2). & (reliability: 374.0) & (original description: Putative HMA, Description = Metal ion binding, PFAM = PF00403;PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf08415_188228-193438' '(at3g48970 : 147.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: copper ion binding, metal ion binding; INVOLVED IN: copper ion transport, metal ion transport; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT3G56891.1); Has 948 Blast hits to 923 proteins in 65 species: Archae - 2; Bacteria - 55; Metazoa - 0; Fungi - 0; Plants - 888; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative At3g48970, Description = Heavy metal transport/detoxification superfamily protein, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf08527_236027-241493' '(at2g33740 : 201.0) encodes a copper binding protein that forms tetramers in vitro. Gene is expressed in all tissues examined and protein is localized to the chloroplast.; CUTA; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to metal ion; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Divalent ion tolerance protein, CutA1 (InterPro:IPR004323), Nitrogen regulatory PII-like, alpha/beta (InterPro:IPR011322); Has 2474 Blast hits to 2474 proteins in 915 species: Archae - 144; Bacteria - 1534; Metazoa - 199; Fungi - 5; Plants - 49; Viruses - 0; Other Eukaryotes - 543 (source: NCBI BLink). & (gnl|cdd|38548 : 147.0) no description available & (gnl|cdd|79985 : 138.0) no description available & (reliability: 402.0) & (original description: Putative cutA, Description = Divalent-cation tolerance protein CutA, PFAM = PF03091)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf08774_106122-109248' '(at2g37390 : 108.0) Chloroplast-targeted copper chaperone protein; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Chloroplast-targeted copper chaperone protein (TAIR:AT3G53530.1). & (reliability: 216.0) & (original description: Putative TCM_041919, Description = Chloroplast-targeted copper chaperone protein, putative, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf09015_74401-78828' '(at5g17450 : 139.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G71050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative HIPP26, Description = Heavy metal-associated isoprenylated plant protein 26, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf09355_362160-365122' '(gnl|cdd|66715 : 434.0) no description available & (at1g09240 : 380.0) Encodes a nicotianamine synthase.; nicotianamine synthase 3 (NAS3); CONTAINS InterPro DOMAIN/s: Nicotianamine synthase (InterPro:IPR004298); BEST Arabidopsis thaliana protein match is: nicotianamine synthase 4 (TAIR:AT1G56430.1); Has 198 Blast hits to 195 proteins in 46 species: Archae - 20; Bacteria - 10; Metazoa - 0; Fungi - 20; Plants - 147; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (q9xfb7|nas9_horvu : 313.0) Nicotianamine synthase 9 (EC 2.5.1.43) (S-adenosyl-L-methionine:S-adenosyl-L-methionine:S-adenosyl-methionine 3-amino-3-carboxypropyltransferase 9) - Hordeum vulgare (Barley) & (reliability: 760.0) & (original description: Putative CHLN, Description = Nicotianamine synthase, PFAM = PF03059)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf10219_65401-69095' '(at1g06330 : 137.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: copper ion binding, metal ion binding; INVOLVED IN: copper ion transport, metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G18196.1); Has 1362 Blast hits to 1319 proteins in 117 species: Archae - 0; Bacteria - 114; Metazoa - 22; Fungi - 14; Plants - 1212; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|36816 : 80.0) no description available & (reliability: 274.0) & (original description: Putative Sb03g035070, Description = Putative uncharacterized protein Sb03g035070, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf11182_21120-46376' '(at5g50740 : 125.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: farnesylated protein 3 (TAIR:AT5G63530.2). & (reliability: 250.0) & (original description: Putative FP3, Description = Adenine nucleotide alpha hydrolases-like superfamily protein, PFAM = PF00403;PF00403;PF00582)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf11182_42423-46693' '(at5g50740 : 110.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: farnesylated protein 3 (TAIR:AT5G63530.2). & (reliability: 220.0) & (original description: Putative FP3, Description = Heavy metal transport/detoxification superfamily protein, PFAM = PF00403;PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf12504_113086-117272' '(at5g50740 : 182.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: farnesylated protein 3 (TAIR:AT5G63530.2). & (reliability: 364.0) & (original description: Putative HMA, Description = Metal ion binding, PFAM = PF00403;PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf13029_426570-431983' '(at3g56240 : 107.0) CCH protein belongs to a family of eukaryotic proteins that participate in intracellular copper homeostasis by delivering this metal to the secretory pathway; mainly located along the vascular bundles of senescing leaves and petioles as well as in stem sieve elements; hypothesized to have a role in copper mobilization from decaying organs towards reproductive structures, as a result of metalloprotein breakdown. The plant-specific C-terminal domain of the CCH protein forms amyloid-like fibrils in vitro.; copper chaperone (CCH); FUNCTIONS IN: copper chaperone activity; INVOLVED IN: in 6 processes; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: homolog of anti-oxidant 1 (TAIR:AT1G66240.1); Has 2051 Blast hits to 1937 proteins in 366 species: Archae - 10; Bacteria - 382; Metazoa - 168; Fungi - 207; Plants - 1221; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative CCH, Description = Copper transport protein CCH, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf15054_179944-183122' '(q96551|metk_catro : 731.0) S-adenosylmethionine synthetase 1 (EC 2.5.1.6) (Methionine adenosyltransferase 1) (AdoMet synthetase 1) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g17390 : 707.0) S-adenosylmethionine synthetase; METHIONINE OVER-ACCUMULATOR 3 (MTO3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: lignin biosynthetic process, response to cold, methionine metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: nucleolus, cell wall, plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 1 (TAIR:AT1G02500.2); Has 10856 Blast hits to 10849 proteins in 2868 species: Archae - 12; Bacteria - 5440; Metazoa - 373; Fungi - 167; Plants - 707; Viruses - 1; Other Eukaryotes - 4156 (source: NCBI BLink). & (gnl|cdd|36719 : 662.0) no description available & (gnl|cdd|81480 : 592.0) no description available & (reliability: 1414.0) & (original description: Putative SAMS2, Description = S-adenosylmethionine synthase 2, PFAM = PF00438;PF02773;PF02772)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf15666_130293-133841' '(at5g24580 : 214.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: copper ion binding, metal ion binding; INVOLVED IN: copper ion transport, metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G50740.1); Has 553 Blast hits to 416 proteins in 80 species: Archae - 0; Bacteria - 22; Metazoa - 98; Fungi - 42; Plants - 238; Viruses - 27; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative BnaA06g27030D, Description = BnaA06g27030D protein, PFAM = PF00403;PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf16189_65374-68447' '(at3g13110 : 416.0) Encodes a mitochondrial serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.; serine acetyltransferase 2;2 (SERAT2;2); FUNCTIONS IN: zinc ion binding, serine O-acetyltransferase activity; INVOLVED IN: response to cadmium ion, cysteine biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: serine acetyltransferase 2;1 (TAIR:AT1G55920.1); Has 25521 Blast hits to 25511 proteins in 2666 species: Archae - 387; Bacteria - 19255; Metazoa - 8; Fungi - 225; Plants - 240; Viruses - 18; Other Eukaryotes - 5388 (source: NCBI BLink). & (gnl|cdd|39947 : 349.0) no description available & (gnl|cdd|83739 : 286.0) no description available & (reliability: 794.0) & (original description: Putative sat4, Description = Serine acetyltransferase 4, PFAM = PF06426;PF00132;PF00132)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf18745_18830-22377' '(at1g22990 : 174.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G71050.1); Has 1142 Blast hits to 1079 proteins in 46 species: Archae - 2; Bacteria - 2; Metazoa - 2; Fungi - 13; Plants - 1123; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative HIPP22, Description = Heavy metal-associated isoprenylated plant protein 22, PFAM = PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf22566_21955-24191' '(at3g15352 : 88.6) Encodes protein similar to yeast COX17, a copper-binding protein that mediates the delivery of Cu to the mitochondria for the assembly of a functional cytochrome oxidase complex.; cytochrome c oxidase 17 (COX17); FUNCTIONS IN: copper chaperone activity; INVOLVED IN: response to bacterium, response to copper ion; LOCATED IN: mitochondrial intermembrane space; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase copper chaperone (InterPro:IPR007745); BEST Arabidopsis thaliana protein match is: Cytochrome C oxidase copper chaperone (COX17) (TAIR:AT1G53030.1); Has 294 Blast hits to 294 proteins in 132 species: Archae - 0; Bacteria - 0; Metazoa - 138; Fungi - 51; Plants - 55; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative cox17, Description = Cytochrome c oxidase copper chaperone, PFAM = PF05051)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf26202_33294-50813' '(at5g50740 : 134.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: farnesylated protein 3 (TAIR:AT5G63530.2). & (reliability: 268.0) & (original description: Putative COR78, Description = Cold regulated protein, PFAM = PF00403;PF00403)' T '15.2' 'metal handling.binding, chelation and storage' 'niben101scf30958_62316-66344' '(at3g24450 : 128.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: copper ion binding, metal ion binding; INVOLVED IN: copper ion transport, metal ion transport; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Chloroplast-targeted copper chaperone protein (TAIR:AT2G37390.1); Has 769 Blast hits to 747 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 2; Plants - 757; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative Os01g0719600, Description = Os01g0719600 protein, PFAM = PF00403)' T '15.3' 'metal handling.regulation' 'nbv0.3scaffold46930_3658-9342' '(at2g01770 : 306.0) Encodes an iron transporter required for iron sequestration into vacuoles. Expressed in developing embryo and seed. Localized in the vacuolar membrane.; vacuolar iron transporter 1 (VIT1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217); Has 1947 Blast hits to 1945 proteins in 688 species: Archae - 106; Bacteria - 1196; Metazoa - 0; Fungi - 163; Plants - 191; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (gnl|cdd|29966 : 277.0) no description available & (gnl|cdd|39674 : 246.0) no description available & (reliability: 612.0) & (original description: Putative VIT1, Description = Vacuolar iron transporter 1, PFAM = PF01988)' T '15.3' 'metal handling.regulation' 'niben101scf00309_576643-585193' '(at4g14710 : 348.0) ATARD2; FUNCTIONS IN: acireductone dioxygenase [iron(II)-requiring] activity, metal ion binding; INVOLVED IN: oxidation reduction, L-methionine salvage from methylthioadenosine; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Acireductone dioxygenase, ARD (InterPro:IPR004313), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: acireductone dioxygenase 1 (TAIR:AT4G14716.1). & (q58fk4|ard2_orysa : 321.0) 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 (EC 1.13.-.-) (Aci-reductone dioxygenase 2) (Submergence-induced protein 2A) - Oryza sativa (Rice) & (gnl|cdd|37318 : 284.0) no description available & (gnl|cdd|66734 : 218.0) no description available & (reliability: 696.0) & (original description: Putative adi1, Description = 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase, PFAM = PF03079)' T '15.3' 'metal handling.regulation' 'niben101scf05972_293727-303712' '(at4g14710 : 352.0) ATARD2; FUNCTIONS IN: acireductone dioxygenase [iron(II)-requiring] activity, metal ion binding; INVOLVED IN: oxidation reduction, L-methionine salvage from methylthioadenosine; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Acireductone dioxygenase, ARD (InterPro:IPR004313), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: acireductone dioxygenase 1 (TAIR:AT4G14716.1). & (q58fk4|ard2_orysa : 319.0) 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 (EC 1.13.-.-) (Aci-reductone dioxygenase 2) (Submergence-induced protein 2A) - Oryza sativa (Rice) & (gnl|cdd|37318 : 289.0) no description available & (gnl|cdd|66734 : 222.0) no description available & (reliability: 704.0) & (original description: Putative adi1, Description = 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase, PFAM = PF03079)' T '15.3' 'metal handling.regulation' 'niben101scf08368_56013-61426' '(at2g01770 : 329.0) Encodes an iron transporter required for iron sequestration into vacuoles. Expressed in developing embryo and seed. Localized in the vacuolar membrane.; vacuolar iron transporter 1 (VIT1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217); Has 1947 Blast hits to 1945 proteins in 688 species: Archae - 106; Bacteria - 1196; Metazoa - 0; Fungi - 163; Plants - 191; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (gnl|cdd|29966 : 281.0) no description available & (gnl|cdd|39674 : 250.0) no description available & (reliability: 658.0) & (original description: Putative VIT1, Description = Vacuolar iron transporter 1, PFAM = PF01988)' T '15.3' 'metal handling.regulation' 'niben101scf09455_135268-147340' '(at2g37330 : 383.0) Encodes an ABC transporter-like protein, without an ATPase domain, required for aluminum (Al) resistance/tolerance and may function to redistribute accumulated Al away from sensitive tissues in order to protect the growing root from the toxic effects of Al.; ALUMINUM SENSITIVE 3 (ALS3); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00245 (InterPro:IPR005226); Has 1906 Blast hits to 1906 proteins in 934 species: Archae - 39; Bacteria - 1722; Metazoa - 0; Fungi - 12; Plants - 43; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (gnl|cdd|30739 : 182.0) no description available & (reliability: 766.0) & (original description: Putative ALS3, Description = Protein ALUMINUM SENSITIVE 3, PFAM = PF03649)' T '15.3' 'metal handling.regulation' 'niben101scf11254_55574-68693' '(at2g37330 : 377.0) Encodes an ABC transporter-like protein, without an ATPase domain, required for aluminum (Al) resistance/tolerance and may function to redistribute accumulated Al away from sensitive tissues in order to protect the growing root from the toxic effects of Al.; ALUMINUM SENSITIVE 3 (ALS3); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00245 (InterPro:IPR005226); Has 1906 Blast hits to 1906 proteins in 934 species: Archae - 39; Bacteria - 1722; Metazoa - 0; Fungi - 12; Plants - 43; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (gnl|cdd|30739 : 180.0) no description available & (reliability: 754.0) & (original description: Putative ALS3, Description = Protein ALUMINUM SENSITIVE 3, PFAM = PF03649)' T '16' 'secondary metabolism' '' '' '16.1' 'secondary metabolism.isoprenoids' 'nbv0.3scaffold16576_14732-23813' '(gnl|cdd|35718 : 1128.0) no description available & (at1g78950 : 1012.0) Terpenoid cyclases family protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Squalene cyclase (InterPro:IPR018333), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: camelliol C synthase 1 (TAIR:AT1G78955.1); Has 2107 Blast hits to 2005 proteins in 574 species: Archae - 6; Bacteria - 886; Metazoa - 160; Fungi - 240; Plants - 609; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|29791 : 647.0) no description available & (reliability: 1862.0) & (original description: Putative TTS1, Description = Beta-amyrin synthase, PFAM = PF13249;PF13243)' T '16.1' 'secondary metabolism.isoprenoids' 'nbv0.3scaffold39285_4884-16164' '(gnl|cdd|35718 : 1158.0) no description available & (at1g78960 : 1000.0) Encodes a multifunctional 2-3-oxidosqualene (OS)-triterpene cyclase that can cyclize OS into lupeol, alpha- and beta-amyrin.; lupeol synthase 2 (LUP2); CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases family protein (TAIR:AT1G66960.1); Has 2115 Blast hits to 2006 proteins in 580 species: Archae - 2; Bacteria - 935; Metazoa - 110; Fungi - 239; Plants - 613; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|29791 : 837.0) no description available & (reliability: 1948.0) & (original description: Putative OSCBPW, Description = Lupeol synthase, PFAM = PF13249;PF13243)' T '16.1' 'secondary metabolism.isoprenoids' 'nbv0.3scaffold47462_1081-11385' '(gnl|cdd|35718 : 1291.0) no description available & (at1g78950 : 1234.0) Terpenoid cyclases family protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Squalene cyclase (InterPro:IPR018333), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: camelliol C synthase 1 (TAIR:AT1G78955.1); Has 2107 Blast hits to 2005 proteins in 574 species: Archae - 6; Bacteria - 886; Metazoa - 160; Fungi - 240; Plants - 609; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|29791 : 862.0) no description available & (reliability: 2430.0) & (original description: Putative TTS1, Description = Beta-amyrin synthase, PFAM = PF13243;PF13249)' T '16.1' 'secondary metabolism.isoprenoids' 'nbv0.3scaffold66543_2344-8559' '(at2g26250 : 843.0) epidermis-specific, encodes KCS10, a putative 3-ketoacyl-CoA synthase. probably involved in the synthesis of long-chain lipids found in the cuticle.; 3-ketoacyl-CoA synthase 10 (KCS10); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: in 8 processes; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 4 (TAIR:AT1G19440.1); Has 1723 Blast hits to 1687 proteins in 351 species: Archae - 0; Bacteria - 632; Metazoa - 0; Fungi - 0; Plants - 985; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|87517 : 488.0) no description available & (reliability: 1686.0) & (original description: Putative afi, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T '16.1' 'secondary metabolism.isoprenoids' 'nbv0.3scaffold76442_2054-6131' '(at3g11950 : 399.0) publications Tian et al (2007) and Sadre et al (2006) refer to At3g11950. The prenyltransferase gene studied is actually At3g11945 which arises from a split of the previous At3g11950 gene model.; TRAF-like superfamily protein; FUNCTIONS IN: prenyltransferase activity, zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, TRAF-type (InterPro:IPR001293), TRAF-like (InterPro:IPR008974). & (reliability: 798.0) & (original description: Putative Sb05g001630, Description = Putative uncharacterized protein Sb05g001630, PFAM = PF02176)' T '16.1' 'secondary metabolism.isoprenoids' 'nbv0.3scaffold81729_2321-6577' '(gnl|cdd|29478 : 569.0) no description available & (q40577|5eas_tobac : 532.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (at5g23960 : 373.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 680.0) & (original description: Putative TPS3, Description = Probable terpene synthase 3, PFAM = PF03936;PF01397)' T '16.1' 'secondary metabolism.isoprenoids' 'nbv0.3scaffold93197_1880-4658' '(q40577|5eas_tobac : 356.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 213.0) no description available & (at3g29410 : 137.0) Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: embryo, root, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1); Has 1701 Blast hits to 1673 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1697; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative tps1, Description = Sesquiterpene synthase, PFAM = PF01397)' T '16.1' 'secondary metabolism.isoprenoids' 'niben044scf00004447ctg007_3991-8389' '(q40577|5eas_tobac : 689.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 458.0) no description available & (at5g23960 : 287.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 534.0) & (original description: Putative eas, Description = 5-epi-aristolochene synthase, PFAM = PF03936;PF03936;PF01397)' T '16.1' 'secondary metabolism.isoprenoids' 'niben044scf00023720ctg009_17629-27746' '(gnl|cdd|35718 : 1254.0) no description available & (at1g78950 : 1195.0) Terpenoid cyclases family protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Squalene cyclase (InterPro:IPR018333), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: camelliol C synthase 1 (TAIR:AT1G78955.1); Has 2107 Blast hits to 2005 proteins in 574 species: Archae - 6; Bacteria - 886; Metazoa - 160; Fungi - 240; Plants - 609; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|29791 : 831.0) no description available & (reliability: 2354.0) & (original description: Putative TTS1, Description = Beta-amyrin synthase, PFAM = PF13249;PF13243)' T '16.1' 'secondary metabolism.isoprenoids' 'niben044scf00041813ctg004_1-6218' '(gnl|cdd|35718 : 995.0) no description available & (at1g78950 : 919.0) Terpenoid cyclases family protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Squalene cyclase (InterPro:IPR018333), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: camelliol C synthase 1 (TAIR:AT1G78955.1); Has 2107 Blast hits to 2005 proteins in 574 species: Archae - 6; Bacteria - 886; Metazoa - 160; Fungi - 240; Plants - 609; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|29791 : 742.0) no description available & (reliability: 1814.0) & (original description: Putative bAS, Description = Beta-amyrin synthase, PFAM = PF13243;PF13249)' T '16.1' 'secondary metabolism.isoprenoids' 'niben044scf00055581ctg000_5015-9471' '(q40577|5eas_tobac : 375.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 233.0) no description available & (at3g14520 : 137.0) Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: embryo, sepal, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14540.1); Has 1704 Blast hits to 1673 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1700; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative HRR8, Description = Putative 5-epi-aristolochene synthase, PFAM = PF01397;PF03936)' T '16.1' 'secondary metabolism.isoprenoids' 'niben101scf00712_190713-195062' '(q40577|5eas_tobac : 712.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 468.0) no description available & (at5g23960 : 296.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 534.0) & (original description: Putative eas, Description = 5-epi-aristolochene synthase, PFAM = PF01397;PF03936;PF03936)' T '16.1' 'secondary metabolism.isoprenoids' 'niben101scf00739_497104-548028' '(gnl|cdd|35718 : 1290.0) no description available & (at1g78950 : 1195.0) Terpenoid cyclases family protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Squalene cyclase (InterPro:IPR018333), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: camelliol C synthase 1 (TAIR:AT1G78955.1); Has 2107 Blast hits to 2005 proteins in 574 species: Archae - 6; Bacteria - 886; Metazoa - 160; Fungi - 240; Plants - 609; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|29791 : 855.0) no description available & (reliability: 2340.0) & (original description: Putative TTS1, Description = Beta-amyrin synthase, PFAM = PF13243;PF13249)' T '16.1' 'secondary metabolism.isoprenoids' 'niben101scf01660_285254-289336' '(gnl|cdd|29478 : 199.0) no description available & (p93665|dcs1_goshi : 165.0) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (at3g14520 : 117.0) Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: embryo, sepal, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14540.1); Has 1704 Blast hits to 1673 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1700; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative tps1, Description = Terpene synthase, PFAM = PF03936)' T '16.1' 'secondary metabolism.isoprenoids' 'niben101scf01818_63731-67546' '(at3g11950 : 380.0) publications Tian et al (2007) and Sadre et al (2006) refer to At3g11950. The prenyltransferase gene studied is actually At3g11945 which arises from a split of the previous At3g11950 gene model.; TRAF-like superfamily protein; FUNCTIONS IN: prenyltransferase activity, zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, TRAF-type (InterPro:IPR001293), TRAF-like (InterPro:IPR008974). & (reliability: 760.0) & (original description: Putative Sb05g001630, Description = Putative uncharacterized protein Sb05g001630, PFAM = PF02176)' T '16.1' 'secondary metabolism.isoprenoids' 'niben101scf01827_311832-318425' '(at2g26250 : 833.0) epidermis-specific, encodes KCS10, a putative 3-ketoacyl-CoA synthase. probably involved in the synthesis of long-chain lipids found in the cuticle.; 3-ketoacyl-CoA synthase 10 (KCS10); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: in 8 processes; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 4 (TAIR:AT1G19440.1); Has 1723 Blast hits to 1687 proteins in 351 species: Archae - 0; Bacteria - 632; Metazoa - 0; Fungi - 0; Plants - 985; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|87517 : 480.0) no description available & (reliability: 1666.0) & (original description: Putative afi, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T '16.1' 'secondary metabolism.isoprenoids' 'niben101scf02836_328827-340340' '(gnl|cdd|35718 : 676.0) no description available & (at2g07050 : 612.0) Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.; cycloartenol synthase 1 (CAS1); FUNCTIONS IN: cycloartenol synthase activity; INVOLVED IN: pentacyclic triterpenoid biosynthetic process, thylakoid membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lanosterol synthase 1 (TAIR:AT3G45130.1); Has 2063 Blast hits to 1929 proteins in 563 species: Archae - 2; Bacteria - 902; Metazoa - 86; Fungi - 243; Plants - 616; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|29791 : 451.0) no description available & (reliability: 1136.0) & (original description: Putative bas1, Description = Terpene cyclase/mutase family member, PFAM = PF13249;PF13243)' T '16.1' 'secondary metabolism.isoprenoids' 'niben101scf05405_890933-895003' '(at3g11950 : 397.0) publications Tian et al (2007) and Sadre et al (2006) refer to At3g11950. The prenyltransferase gene studied is actually At3g11945 which arises from a split of the previous At3g11950 gene model.; TRAF-like superfamily protein; FUNCTIONS IN: prenyltransferase activity, zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, TRAF-type (InterPro:IPR001293), TRAF-like (InterPro:IPR008974). & (reliability: 794.0) & (original description: Putative Sb05g001630, Description = Putative uncharacterized protein Sb05g001630, PFAM = PF02176)' T '16.1' 'secondary metabolism.isoprenoids' 'niben101scf16511_86672-90928' '(gnl|cdd|29478 : 596.0) no description available & (q40577|5eas_tobac : 558.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (at5g23960 : 388.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 726.0) & (original description: Putative TPS32, Description = Viridiflorene synthase, PFAM = PF03936;PF01397)' T '16.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'nbv0.3scaffold81608_745-6844' '(at2g39550 : 303.0) encodes the beta subunit of geranylgeranyl transferase (GGT-IB), involved in both ABA-mediated and auxin signaling pathways.; PGGT-I; CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase beta subunit 1 (TAIR:AT5G12210.1); Has 1518 Blast hits to 1317 proteins in 251 species: Archae - 0; Bacteria - 20; Metazoa - 603; Fungi - 437; Plants - 177; Viruses - 0; Other Eukaryotes - 281 (source: NCBI BLink). & (gnl|cdd|35588 : 262.0) no description available & (gnl|cdd|29794 : 225.0) no description available & (reliability: 606.0) & (original description: Putative GGB, Description = Geranylgeranyl transferase type-1 subunit beta, PFAM = PF00432;PF00432;PF00432)' T '16.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'nbv0.5scaffold6785_32234-40463' '(at2g39550 : 435.0) encodes the beta subunit of geranylgeranyl transferase (GGT-IB), involved in both ABA-mediated and auxin signaling pathways.; PGGT-I; CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase beta subunit 1 (TAIR:AT5G12210.1); Has 1518 Blast hits to 1317 proteins in 251 species: Archae - 0; Bacteria - 20; Metazoa - 603; Fungi - 437; Plants - 177; Viruses - 0; Other Eukaryotes - 281 (source: NCBI BLink). & (gnl|cdd|35588 : 391.0) no description available & (gnl|cdd|29794 : 334.0) no description available & (q04903|pftb_pea : 120.0) Protein farnesyltransferase subunit beta (EC 2.5.1.58) (CAAX farnesyltransferase subunit beta) (RAS proteins prenyltransferase beta) (FTase-beta) - Pisum sativum (Garden pea) & (reliability: 870.0) & (original description: Putative GGB, Description = Geranylgeranyl transferase type-1 subunit beta, PFAM = PF00432;PF00432;PF00432;PF00432;PF00432)' T '16.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'niben044scf00008832ctg005_1-4914' '(gnl|cdd|35587 : 395.0) no description available & (at5g12210 : 389.0) RAB geranylgeranyl transferase beta subunit 1; FUNCTIONS IN: catalytic activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase beta subunit 2 (TAIR:AT3G12070.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29793 : 378.0) no description available & (q04903|pftb_pea : 93.2) Protein farnesyltransferase subunit beta (EC 2.5.1.58) (CAAX farnesyltransferase subunit beta) (RAS proteins prenyltransferase beta) (FTase-beta) - Pisum sativum (Garden pea) & (reliability: 778.0) & (original description: Putative RGTB1, Description = Geranylgeranyl transferase type-2 subunit beta 1, PFAM = PF00432;PF00432;PF00432;PF00432;PF00432)' T '16.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'niben044scf00017250ctg002_1-5563' '(at2g39550 : 276.0) encodes the beta subunit of geranylgeranyl transferase (GGT-IB), involved in both ABA-mediated and auxin signaling pathways.; PGGT-I; CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase beta subunit 1 (TAIR:AT5G12210.1); Has 1518 Blast hits to 1317 proteins in 251 species: Archae - 0; Bacteria - 20; Metazoa - 603; Fungi - 437; Plants - 177; Viruses - 0; Other Eukaryotes - 281 (source: NCBI BLink). & (gnl|cdd|35588 : 235.0) no description available & (gnl|cdd|29794 : 197.0) no description available & (reliability: 552.0) & (original description: Putative GGB, Description = Geranylgeranyl transferase type-1 subunit beta, PFAM = PF00432;PF00432;PF00432)' T '16.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'niben101scf00744_216307-225318' '(at4g24490 : 577.0) RAB geranylgeranyl transferase alpha subunit 1; FUNCTIONS IN: protein prenyltransferase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein prenyltransferase (InterPro:IPR008940), Protein prenyltransferase, alpha subunit (InterPro:IPR002088); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase alpha subunit 2 (TAIR:AT5G41820.1); Has 3834 Blast hits to 3112 proteins in 396 species: Archae - 22; Bacteria - 493; Metazoa - 1923; Fungi - 431; Plants - 375; Viruses - 2; Other Eukaryotes - 588 (source: NCBI BLink). & (gnl|cdd|35749 : 251.0) no description available & (gnl|cdd|35095 : 147.0) no description available & (o24304|pfta_pea : 82.0) Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit (EC 2.5.1.58) (EC 2.5.1.59) (CAAX farnesyltransferase alpha subunit) (Ras proteins prenyltransferase alpha) (FTase-alpha) (Type I protein geranyl-geranyltransferas & (reliability: 1154.0) & (original description: Putative RGTA1, Description = Geranylgeranyl transferase type-2 subunit alpha 1, PFAM = PF01239;PF01239;PF01239;PF01239;PF01239)' T '16.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'niben101scf03403_80984-91481' '(at4g24490 : 575.0) RAB geranylgeranyl transferase alpha subunit 1; FUNCTIONS IN: protein prenyltransferase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein prenyltransferase (InterPro:IPR008940), Protein prenyltransferase, alpha subunit (InterPro:IPR002088); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase alpha subunit 2 (TAIR:AT5G41820.1); Has 3834 Blast hits to 3112 proteins in 396 species: Archae - 22; Bacteria - 493; Metazoa - 1923; Fungi - 431; Plants - 375; Viruses - 2; Other Eukaryotes - 588 (source: NCBI BLink). & (gnl|cdd|35749 : 250.0) no description available & (gnl|cdd|35095 : 146.0) no description available & (o24304|pfta_pea : 80.9) Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit (EC 2.5.1.58) (EC 2.5.1.59) (CAAX farnesyltransferase alpha subunit) (Ras proteins prenyltransferase alpha) (FTase-alpha) (Type I protein geranyl-geranyltransferas & (reliability: 1150.0) & (original description: Putative RGTA1, Description = Geranylgeranyl transferase type-2 subunit alpha 1, PFAM = PF01239;PF01239;PF01239;PF01239;PF01239)' T '16.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'niben101scf05206_334818-343303' '(at2g39550 : 337.0) encodes the beta subunit of geranylgeranyl transferase (GGT-IB), involved in both ABA-mediated and auxin signaling pathways.; PGGT-I; CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase beta subunit 1 (TAIR:AT5G12210.1); Has 1518 Blast hits to 1317 proteins in 251 species: Archae - 0; Bacteria - 20; Metazoa - 603; Fungi - 437; Plants - 177; Viruses - 0; Other Eukaryotes - 281 (source: NCBI BLink). & (gnl|cdd|35588 : 295.0) no description available & (gnl|cdd|29794 : 246.0) no description available & (q04903|pftb_pea : 84.0) Protein farnesyltransferase subunit beta (EC 2.5.1.58) (CAAX farnesyltransferase subunit beta) (RAS proteins prenyltransferase beta) (FTase-beta) - Pisum sativum (Garden pea) & (reliability: 674.0) & (original description: Putative NtbetaGG, Description = Protein geranylgeranyltransferase beta-subunit, PFAM = PF00432;PF00432;PF00432;PF00432)' T '16.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'niben101scf06249_291838-295165' '(at1g74470 : 746.0) Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate.; Pyridine nucleotide-disulphide oxidoreductase family protein; FUNCTIONS IN: geranylgeranyl reductase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Geranylgeranyl reductase (InterPro:IPR010253), Geranylgeranyl reductase, plant/cyanobacteria (InterPro:IPR011774), Geranylgeranyl reductase, plant/prokaryotic (InterPro:IPR011777); Has 4540 Blast hits to 4539 proteins in 1185 species: Archae - 562; Bacteria - 2644; Metazoa - 5; Fungi - 25; Plants - 302; Viruses - 0; Other Eukaryotes - 1002 (source: NCBI BLink). & (gnl|cdd|30989 : 184.0) no description available & (reliability: 1492.0) & (original description: Putative CHLP, Description = Geranylgeranyl diphosphate reductase, chloroplastic, PFAM = PF01494)' T '16.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'niben101scf06359_86713-95978' '(at2g39550 : 444.0) encodes the beta subunit of geranylgeranyl transferase (GGT-IB), involved in both ABA-mediated and auxin signaling pathways.; PGGT-I; CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase beta subunit 1 (TAIR:AT5G12210.1); Has 1518 Blast hits to 1317 proteins in 251 species: Archae - 0; Bacteria - 20; Metazoa - 603; Fungi - 437; Plants - 177; Viruses - 0; Other Eukaryotes - 281 (source: NCBI BLink). & (gnl|cdd|35588 : 390.0) no description available & (gnl|cdd|29794 : 336.0) no description available & (q04903|pftb_pea : 124.0) Protein farnesyltransferase subunit beta (EC 2.5.1.58) (CAAX farnesyltransferase subunit beta) (RAS proteins prenyltransferase beta) (FTase-beta) - Pisum sativum (Garden pea) & (reliability: 888.0) & (original description: Putative GGB, Description = Geranylgeranyl transferase type-1 subunit beta, PFAM = PF00432;PF00432;PF00432;PF00432;PF00432)' T '16.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'niben101scf08918_213006-216364' '(at1g74470 : 519.0) Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate.; Pyridine nucleotide-disulphide oxidoreductase family protein; FUNCTIONS IN: geranylgeranyl reductase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Geranylgeranyl reductase (InterPro:IPR010253), Geranylgeranyl reductase, plant/cyanobacteria (InterPro:IPR011774), Geranylgeranyl reductase, plant/prokaryotic (InterPro:IPR011777); Has 4540 Blast hits to 4539 proteins in 1185 species: Archae - 562; Bacteria - 2644; Metazoa - 5; Fungi - 25; Plants - 302; Viruses - 0; Other Eukaryotes - 1002 (source: NCBI BLink). & (gnl|cdd|30989 : 186.0) no description available & (reliability: 1038.0) & (original description: Putative chlp, Description = Geranylgeranyl diphosphate reductase, PFAM = )' T '16.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'niben101scf09028_38103-47013' '(at5g12210 : 525.0) RAB geranylgeranyl transferase beta subunit 1; FUNCTIONS IN: catalytic activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase beta subunit 2 (TAIR:AT3G12070.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35587 : 522.0) no description available & (gnl|cdd|29793 : 459.0) no description available & (q04903|pftb_pea : 119.0) Protein farnesyltransferase subunit beta (EC 2.5.1.58) (CAAX farnesyltransferase subunit beta) (RAS proteins prenyltransferase beta) (FTase-beta) - Pisum sativum (Garden pea) & (reliability: 1050.0) & (original description: Putative RGTB1, Description = Geranylgeranyl transferase type-2 subunit beta 1, PFAM = PF00432;PF00432;PF00432;PF00432;PF00432)' T '16.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'niben101scf09554_134349-138394' '(gnl|cdd|29216 : 162.0) no description available & (at5g15460 : 149.0) membrane-anchored ubiquitin-fold protein 2 (MUB2); CONTAINS InterPro DOMAIN/s: Membrane-anchored ubiquitin-fold protein, HCG-1 (InterPro:IPR017000); BEST Arabidopsis thaliana protein match is: membrane-anchored ubiquitin-fold protein 1 precursor (TAIR:AT3G01050.1); Has 168 Blast hits to 168 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 11; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q6z8k4|mub3_orysa : 135.0) Membrane-anchored ubiquitin-fold protein 3 precursor (Membrane-anchored ub-fold protein 3) (OsMUB3) - Oryza sativa (Rice) & (reliability: 298.0) & (original description: Putative MUB1, Description = Membrane-anchored ubiquitin-fold protein 1, PFAM = PF13881)' T '16.1.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway.DXS' 'niben044scf00009504ctg017_1008-3881' '(at5g11380 : 284.0) Encodes a protein postulated to have 1-deoxy-D-xylulose 5-phosphate synthase activity.; 1-deoxy-D-xylulose 5-phosphate synthase 3 (DXPS3); FUNCTIONS IN: 1-deoxy-D-xylulose-5-phosphate synthase activity; INVOLVED IN: terpenoid biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: Deoxyxylulose-5-phosphate synthase (TAIR:AT4G15560.1); Has 11671 Blast hits to 11637 proteins in 2411 species: Archae - 101; Bacteria - 6667; Metazoa - 252; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 4446 (source: NCBI BLink). & (o78328|dxs_capan : 259.0) Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplast precursor (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) (CapTKT2) - Capsicum annuum (Bell pepper) & (gnl|cdd|81594 : 226.0) no description available & (gnl|cdd|35743 : 194.0) no description available & (reliability: 568.0) & (original description: Putative dxs, Description = 1-deoxy-D-xylulose-5-phosphate synthase, PFAM = PF02780;PF02779)' T '16.1.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway.DXS' 'niben101scf00246_435992-442110' '(o78328|dxs_capan : 1369.0) Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplast precursor (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) (CapTKT2) - Capsicum annuum (Bell pepper) & (at4g15560 : 1226.0) Encodes a protein with 1-deoxyxylulose 5-phosphate synthase activity involved in the MEP pathway. It is essential for chloroplast development in Arabidopsis; CLOROPLASTOS ALTERADOS 1 (CLA1); FUNCTIONS IN: 1-deoxy-D-xylulose-5-phosphate synthase activity; INVOLVED IN: chlorophyll biosynthetic process, response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826), Transketolase-like, C-terminal (InterPro:IPR015941), Deoxyxylulose-5-phosphate synthase (InterPro:IPR005477), Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: 1-deoxy-D-xylulose 5-phosphate synthase 1 (TAIR:AT3G21500.2); Has 24450 Blast hits to 24392 proteins in 2940 species: Archae - 267; Bacteria - 15281; Metazoa - 526; Fungi - 278; Plants - 446; Viruses - 0; Other Eukaryotes - 7652 (source: NCBI BLink). & (gnl|cdd|81594 : 926.0) no description available & (gnl|cdd|35743 : 687.0) no description available & (reliability: 2452.0) & (original description: Putative TKT2, Description = Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic, PFAM = PF02779;PF13292;PF02780)' T '16.1.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway.DXS' 'niben101scf02399_121272-128677' '(o22567|dxs_orysa : 1012.0) Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplast precursor (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) - Oryza sativa (Rice) & (at4g15560 : 995.0) Encodes a protein with 1-deoxyxylulose 5-phosphate synthase activity involved in the MEP pathway. It is essential for chloroplast development in Arabidopsis; CLOROPLASTOS ALTERADOS 1 (CLA1); FUNCTIONS IN: 1-deoxy-D-xylulose-5-phosphate synthase activity; INVOLVED IN: chlorophyll biosynthetic process, response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826), Transketolase-like, C-terminal (InterPro:IPR015941), Deoxyxylulose-5-phosphate synthase (InterPro:IPR005477), Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: 1-deoxy-D-xylulose 5-phosphate synthase 1 (TAIR:AT3G21500.2); Has 24450 Blast hits to 24392 proteins in 2940 species: Archae - 267; Bacteria - 15281; Metazoa - 526; Fungi - 278; Plants - 446; Viruses - 0; Other Eukaryotes - 7652 (source: NCBI BLink). & (gnl|cdd|81594 : 904.0) no description available & (gnl|cdd|35743 : 589.0) no description available & (reliability: 1990.0) & (original description: Putative dxs2, Description = 1-deoxy-D-xylulose 5-phosphate synthase 2, PFAM = PF02779;PF02780;PF13292)' T '16.1.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway.DXS' 'niben101scf06579_266447-277759' '(at5g11380 : 817.0) Encodes a protein postulated to have 1-deoxy-D-xylulose 5-phosphate synthase activity.; 1-deoxy-D-xylulose 5-phosphate synthase 3 (DXPS3); FUNCTIONS IN: 1-deoxy-D-xylulose-5-phosphate synthase activity; INVOLVED IN: terpenoid biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: Deoxyxylulose-5-phosphate synthase (TAIR:AT4G15560.1); Has 11671 Blast hits to 11637 proteins in 2411 species: Archae - 101; Bacteria - 6667; Metazoa - 252; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 4446 (source: NCBI BLink). & (o78328|dxs_capan : 641.0) Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplast precursor (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) (CapTKT2) - Capsicum annuum (Bell pepper) & (gnl|cdd|81594 : 548.0) no description available & (gnl|cdd|35743 : 453.0) no description available & (reliability: 1634.0) & (original description: Putative dxs, Description = Chloroplast 1-deoxy-D-xylulose-5-phosphate synthase, PFAM = PF02780;PF13292;PF02779)' T '16.1.1.2' 'secondary metabolism.isoprenoids.non-mevalonate pathway.DXR' 'niben101scf01764_326407-337560' '(q8w250|dxr_orysa : 764.0) 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor (EC 1.1.1.267) (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) - Oryza sativa (Rice) & (at5g62790 : 756.0) 1-Deoxy-d-xylulose 5-phosphate reductoisomerase (DXR) catalyzes the first committed step of the 2-C-methyl-d-erythritol 4-phosphate pathway for isoprenoid biosynthesis. In Arabidopsis, DXR is encoded by a single-copy gene. Arabidopsis DXR is targeted to plastids and localizes into chloroplasts of leaf cells. DXR knockout or strongly silenced lines have a seedling lethal, albino phenotype. Transgenic, partially silenced lines expressing 35S:DXR have a variegated phenotype.; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXR); CONTAINS InterPro DOMAIN/s: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal (InterPro:IPR013512), 1-deoxy-D-xylulose 5-phosphate reductoisomerase (InterPro:IPR003821), 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal (InterPro:IPR013644). & (gnl|cdd|81597 : 557.0) no description available & (reliability: 1512.0) & (original description: Putative DXR, Description = 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic, PFAM = PF08436;PF02670;PF13288)' T '16.1.1.2' 'secondary metabolism.isoprenoids.non-mevalonate pathway.DXR' 'niben101scf10366_80726-88302' '(q8w250|dxr_orysa : 765.0) 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor (EC 1.1.1.267) (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) - Oryza sativa (Rice) & (at5g62790 : 754.0) 1-Deoxy-d-xylulose 5-phosphate reductoisomerase (DXR) catalyzes the first committed step of the 2-C-methyl-d-erythritol 4-phosphate pathway for isoprenoid biosynthesis. In Arabidopsis, DXR is encoded by a single-copy gene. Arabidopsis DXR is targeted to plastids and localizes into chloroplasts of leaf cells. DXR knockout or strongly silenced lines have a seedling lethal, albino phenotype. Transgenic, partially silenced lines expressing 35S:DXR have a variegated phenotype.; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXR); CONTAINS InterPro DOMAIN/s: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal (InterPro:IPR013512), 1-deoxy-D-xylulose 5-phosphate reductoisomerase (InterPro:IPR003821), 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal (InterPro:IPR013644). & (gnl|cdd|81597 : 557.0) no description available & (reliability: 1508.0) & (original description: Putative DXR, Description = 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic, PFAM = PF08436;PF02670;PF13288)' T '16.1.1.3' 'secondary metabolism.isoprenoids.non-mevalonate pathway.CMS' 'niben101scf00705_121023-127541' '(at2g02500 : 373.0) Encodes a protein with 4-Diphosphocytidyl-2C-methyl-D-erythritol synthase activity. The enzyme has an absolute requirement for divalent cations (Mg2+ reaches the highest catalytic activity).; ISPD; FUNCTIONS IN: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity; INVOLVED IN: response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast, chloroplast stroma, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase (InterPro:IPR001228), 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site (InterPro:IPR018294); Has 6821 Blast hits to 6815 proteins in 2244 species: Archae - 30; Bacteria - 4964; Metazoa - 52; Fungi - 6; Plants - 61; Viruses - 0; Other Eukaryotes - 1708 (source: NCBI BLink). & (gnl|cdd|80552 : 242.0) no description available & (reliability: 746.0) & (original description: Putative ispD, Description = 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, PFAM = PF01128)' T '16.1.1.3' 'secondary metabolism.isoprenoids.non-mevalonate pathway.CMS' 'niben101scf06862_133487-140494' '(at2g02500 : 375.0) Encodes a protein with 4-Diphosphocytidyl-2C-methyl-D-erythritol synthase activity. The enzyme has an absolute requirement for divalent cations (Mg2+ reaches the highest catalytic activity).; ISPD; FUNCTIONS IN: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity; INVOLVED IN: response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast, chloroplast stroma, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase (InterPro:IPR001228), 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site (InterPro:IPR018294); Has 6821 Blast hits to 6815 proteins in 2244 species: Archae - 30; Bacteria - 4964; Metazoa - 52; Fungi - 6; Plants - 61; Viruses - 0; Other Eukaryotes - 1708 (source: NCBI BLink). & (gnl|cdd|80552 : 245.0) no description available & (reliability: 750.0) & (original description: Putative ISPD, Description = 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic, PFAM = PF01128)' T '16.1.1.4' 'secondary metabolism.isoprenoids.non-mevalonate pathway.CMK' 'niben101scf04558_352793-363126' '(at2g26930 : 481.0) Encodes a 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase.; 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase (CDPMEK); FUNCTIONS IN: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity; INVOLVED IN: response to light stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase (InterPro:IPR004424), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); Has 6617 Blast hits to 6617 proteins in 2226 species: Archae - 3; Bacteria - 4583; Metazoa - 0; Fungi - 2; Plants - 69; Viruses - 0; Other Eukaryotes - 1960 (source: NCBI BLink). & (gnl|cdd|32130 : 222.0) no description available & (reliability: 962.0) & (original description: Putative ISPE, Description = 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic, PFAM = PF00288)' T '16.1.1.5' 'secondary metabolism.isoprenoids.non-mevalonate pathway.MCS' 'nbv0.3scaffold74521_1-6571' '(q9m4w3|ispf_catro : 176.0) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor (EC 4.6.1.12) (MECPS) (MECDP-synthase) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g63970 : 169.0) Encodes a protein with 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity. The protein's activity was confirmed by heterologous expression of phenotypic complementation of the E. coli ispF mutant. Plants defective in this gene display an albino lethal phenotype.; isoprenoid F (ISPF); FUNCTIONS IN: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity; INVOLVED IN: chlorophyll biosynthetic process, carotenoid biosynthetic process, response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core (InterPro:IPR003526); Has 6449 Blast hits to 6448 proteins in 2092 species: Archae - 0; Bacteria - 4352; Metazoa - 0; Fungi - 4; Plants - 64; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (gnl|cdd|30214 : 139.0) no description available & (gnl|cdd|35477 : 90.3) no description available & (reliability: 338.0) & (original description: Putative ispF, Description = 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, PFAM = PF00155;PF02542)' T '16.1.1.5' 'secondary metabolism.isoprenoids.non-mevalonate pathway.MCS' 'nbv0.5scaffold614_77705-89451' '(q9m4w3|ispf_catro : 312.0) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor (EC 4.6.1.12) (MECPS) (MECDP-synthase) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g63970 : 296.0) Encodes a protein with 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity. The protein's activity was confirmed by heterologous expression of phenotypic complementation of the E. coli ispF mutant. Plants defective in this gene display an albino lethal phenotype.; isoprenoid F (ISPF); FUNCTIONS IN: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity; INVOLVED IN: chlorophyll biosynthetic process, carotenoid biosynthetic process, response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core (InterPro:IPR003526); Has 6449 Blast hits to 6448 proteins in 2092 species: Archae - 0; Bacteria - 4352; Metazoa - 0; Fungi - 4; Plants - 64; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (gnl|cdd|30214 : 232.0) no description available & (reliability: 592.0) & (original description: Putative ISPF, Description = 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic, PFAM = PF02542)' T '16.1.1.5' 'secondary metabolism.isoprenoids.non-mevalonate pathway.MCS' 'niben044scf00051098ctg001_3846-16619' '(q9m4w3|ispf_catro : 178.0) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor (EC 4.6.1.12) (MECPS) (MECDP-synthase) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g63970 : 170.0) Encodes a protein with 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity. The protein's activity was confirmed by heterologous expression of phenotypic complementation of the E. coli ispF mutant. Plants defective in this gene display an albino lethal phenotype.; isoprenoid F (ISPF); FUNCTIONS IN: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity; INVOLVED IN: chlorophyll biosynthetic process, carotenoid biosynthetic process, response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core (InterPro:IPR003526); Has 6449 Blast hits to 6448 proteins in 2092 species: Archae - 0; Bacteria - 4352; Metazoa - 0; Fungi - 4; Plants - 64; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (gnl|cdd|30214 : 140.0) no description available & (gnl|cdd|35477 : 98.0) no description available & (reliability: 340.0) & (original description: Putative ispF, Description = 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, PFAM = PF00155;PF02542;PF02542)' T '16.1.1.5' 'secondary metabolism.isoprenoids.non-mevalonate pathway.MCS' 'niben101scf06180_50124-62378' '(q9m4w3|ispf_catro : 310.0) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor (EC 4.6.1.12) (MECPS) (MECDP-synthase) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g63970 : 298.0) Encodes a protein with 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity. The protein's activity was confirmed by heterologous expression of phenotypic complementation of the E. coli ispF mutant. Plants defective in this gene display an albino lethal phenotype.; isoprenoid F (ISPF); FUNCTIONS IN: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity; INVOLVED IN: chlorophyll biosynthetic process, carotenoid biosynthetic process, response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core (InterPro:IPR003526); Has 6449 Blast hits to 6448 proteins in 2092 species: Archae - 0; Bacteria - 4352; Metazoa - 0; Fungi - 4; Plants - 64; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (gnl|cdd|30214 : 231.0) no description available & (reliability: 596.0) & (original description: Putative ISPF, Description = 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic, PFAM = PF02542)' T '16.1.1.6' 'secondary metabolism.isoprenoids.non-mevalonate pathway.HDS' 'nbv0.5scaffold3301_97717-105878' '(at5g60600 : 1186.0) Encodes a chloroplast-localized hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) synthase (HDS), catalyzes the formation of HMBPP from 2-C-methyl-D-erythrytol 2,4-cyclodiphosphate (MEcPP). The HDS enzyme controls the penultimate steps of the biosynthesis of IPP and dimethylallyl diphosphate (DMAPP) via the MEP pathway and may serve as a metabolic control point for SA-mediated disease resistance. In the light, the electrons required for the reaction catalyzed by HDS are directly provided by the electron flow from photosynthesis via ferredoxin. In the dark however, the enzyme requires an electron shuttle: ferredoxin-NADP+ reductase.; 4-hydroxy-3-methylbut-2-enyl diphosphate synthase (HDS); FUNCTIONS IN: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity, 4 iron, 4 sulfur cluster binding; INVOLVED IN: response to light stimulus, isoprenoid biosynthetic process, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, response to bacterium, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dihydropteroate synthase-like (InterPro:IPR011005), 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical (InterPro:IPR017178), 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (InterPro:IPR004588); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73758 : 370.0) no description available & (reliability: 2372.0) & (original description: Putative ispG, Description = 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin), PFAM = PF04551)' T '16.1.1.6' 'secondary metabolism.isoprenoids.non-mevalonate pathway.HDS' 'nbv0.5scaffold8445_19235-22637' '(at5g60600 : 298.0) Encodes a chloroplast-localized hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) synthase (HDS), catalyzes the formation of HMBPP from 2-C-methyl-D-erythrytol 2,4-cyclodiphosphate (MEcPP). The HDS enzyme controls the penultimate steps of the biosynthesis of IPP and dimethylallyl diphosphate (DMAPP) via the MEP pathway and may serve as a metabolic control point for SA-mediated disease resistance. In the light, the electrons required for the reaction catalyzed by HDS are directly provided by the electron flow from photosynthesis via ferredoxin. In the dark however, the enzyme requires an electron shuttle: ferredoxin-NADP+ reductase.; 4-hydroxy-3-methylbut-2-enyl diphosphate synthase (HDS); FUNCTIONS IN: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity, 4 iron, 4 sulfur cluster binding; INVOLVED IN: response to light stimulus, isoprenoid biosynthetic process, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, response to bacterium, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dihydropteroate synthase-like (InterPro:IPR011005), 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical (InterPro:IPR017178), 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (InterPro:IPR004588); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73758 : 196.0) no description available & (reliability: 596.0) & (original description: Putative HDS, Description = 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, PFAM = PF04551)' T '16.1.1.6' 'secondary metabolism.isoprenoids.non-mevalonate pathway.HDS' 'niben044scf00037540ctg001_1-7721' '(at5g60600 : 1224.0) Encodes a chloroplast-localized hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) synthase (HDS), catalyzes the formation of HMBPP from 2-C-methyl-D-erythrytol 2,4-cyclodiphosphate (MEcPP). The HDS enzyme controls the penultimate steps of the biosynthesis of IPP and dimethylallyl diphosphate (DMAPP) via the MEP pathway and may serve as a metabolic control point for SA-mediated disease resistance. In the light, the electrons required for the reaction catalyzed by HDS are directly provided by the electron flow from photosynthesis via ferredoxin. In the dark however, the enzyme requires an electron shuttle: ferredoxin-NADP+ reductase.; 4-hydroxy-3-methylbut-2-enyl diphosphate synthase (HDS); FUNCTIONS IN: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity, 4 iron, 4 sulfur cluster binding; INVOLVED IN: response to light stimulus, isoprenoid biosynthetic process, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, response to bacterium, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dihydropteroate synthase-like (InterPro:IPR011005), 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical (InterPro:IPR017178), 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (InterPro:IPR004588); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73758 : 367.0) no description available & (reliability: 2448.0) & (original description: Putative ISPG, Description = 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic, PFAM = PF04551)' T '16.1.1.6' 'secondary metabolism.isoprenoids.non-mevalonate pathway.HDS' 'niben101scf09264_14959-23115' '(at5g60600 : 1221.0) Encodes a chloroplast-localized hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) synthase (HDS), catalyzes the formation of HMBPP from 2-C-methyl-D-erythrytol 2,4-cyclodiphosphate (MEcPP). The HDS enzyme controls the penultimate steps of the biosynthesis of IPP and dimethylallyl diphosphate (DMAPP) via the MEP pathway and may serve as a metabolic control point for SA-mediated disease resistance. In the light, the electrons required for the reaction catalyzed by HDS are directly provided by the electron flow from photosynthesis via ferredoxin. In the dark however, the enzyme requires an electron shuttle: ferredoxin-NADP+ reductase.; 4-hydroxy-3-methylbut-2-enyl diphosphate synthase (HDS); FUNCTIONS IN: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity, 4 iron, 4 sulfur cluster binding; INVOLVED IN: response to light stimulus, isoprenoid biosynthetic process, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, response to bacterium, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dihydropteroate synthase-like (InterPro:IPR011005), 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical (InterPro:IPR017178), 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (InterPro:IPR004588); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73758 : 370.0) no description available & (reliability: 2442.0) & (original description: Putative hds, Description = 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, PFAM = PF04551)' T '16.1.1.6' 'secondary metabolism.isoprenoids.non-mevalonate pathway.HDS' 'niben101scf11366_191329-199858' '(at5g60600 : 1223.0) Encodes a chloroplast-localized hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) synthase (HDS), catalyzes the formation of HMBPP from 2-C-methyl-D-erythrytol 2,4-cyclodiphosphate (MEcPP). The HDS enzyme controls the penultimate steps of the biosynthesis of IPP and dimethylallyl diphosphate (DMAPP) via the MEP pathway and may serve as a metabolic control point for SA-mediated disease resistance. In the light, the electrons required for the reaction catalyzed by HDS are directly provided by the electron flow from photosynthesis via ferredoxin. In the dark however, the enzyme requires an electron shuttle: ferredoxin-NADP+ reductase.; 4-hydroxy-3-methylbut-2-enyl diphosphate synthase (HDS); FUNCTIONS IN: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity, 4 iron, 4 sulfur cluster binding; INVOLVED IN: response to light stimulus, isoprenoid biosynthetic process, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, response to bacterium, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dihydropteroate synthase-like (InterPro:IPR011005), 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical (InterPro:IPR017178), 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (InterPro:IPR004588); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73758 : 371.0) no description available & (reliability: 2446.0) & (original description: Putative ISPG, Description = 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic, PFAM = PF04551)' T '16.1.1.7' 'secondary metabolism.isoprenoids.non-mevalonate pathway.HDR' 'niben044scf00008217ctg006_3731-11620' '(at4g34350 : 699.0) Arabidopsis ISPH is involved in the plastid nonmevalonate pathway of isoprenoid biosynthesis. It was shown to complement the lethal phenotype of E. coli ispH mutant and is therefore most likely encodes a protein with 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity involved in the last step of mevalonate-independent isopentenyl biosynthesis. Mutant has Albino seedling.; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (HDR); FUNCTIONS IN: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity, 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity; INVOLVED IN: response to antibiotic, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: LytB protein (InterPro:IPR003451); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80817 : 307.0) no description available & (reliability: 1398.0) & (original description: Putative hdr, Description = 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, PFAM = PF02401)' T '16.1.1.7' 'secondary metabolism.isoprenoids.non-mevalonate pathway.HDR' 'niben101scf33689_52192-59225' '(at4g34350 : 724.0) Arabidopsis ISPH is involved in the plastid nonmevalonate pathway of isoprenoid biosynthesis. It was shown to complement the lethal phenotype of E. coli ispH mutant and is therefore most likely encodes a protein with 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity involved in the last step of mevalonate-independent isopentenyl biosynthesis. Mutant has Albino seedling.; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (HDR); FUNCTIONS IN: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity, 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity; INVOLVED IN: response to antibiotic, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: LytB protein (InterPro:IPR003451); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80817 : 309.0) no description available & (reliability: 1448.0) & (original description: Putative hdr, Description = 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, PFAM = PF02401)' T '16.1.1.10' 'secondary metabolism.isoprenoids.non-mevalonate pathway.geranylgeranyl pyrophosphate synthase' 'niben044scf00000908ctg001_1468-5188' '(at4g38460 : 388.0) geranylgeranyl reductase (GGR); INVOLVED IN: isoprenoid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: geranylgeranyl pyrophosphate synthase 1 (TAIR:AT4G36810.1); Has 14555 Blast hits to 14554 proteins in 2890 species: Archae - 343; Bacteria - 9127; Metazoa - 134; Fungi - 165; Plants - 435; Viruses - 12; Other Eukaryotes - 4339 (source: NCBI BLink). & (gnl|cdd|35995 : 249.0) no description available & (q43133|ggpps_sinal : 241.0) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Sinapis alb & (gnl|cdd|30491 : 175.0) no description available & (reliability: 776.0) & (original description: Putative GGR, Description = Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic, PFAM = PF00348)' T '16.1.1.10' 'secondary metabolism.isoprenoids.non-mevalonate pathway.geranylgeranyl pyrophosphate synthase' 'niben044scf00033364ctg005_3576-6714' '(at4g36810 : 386.0) Encodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots.; geranylgeranyl pyrophosphate synthase 1 (GGPS1); FUNCTIONS IN: farnesyltranstransferase activity; INVOLVED IN: isoprenoid biosynthetic process; LOCATED IN: etioplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: Terpenoid synthases superfamily protein (TAIR:AT2G18620.1); Has 16617 Blast hits to 16612 proteins in 2936 species: Archae - 341; Bacteria - 9385; Metazoa - 291; Fungi - 423; Plants - 452; Viruses - 12; Other Eukaryotes - 5713 (source: NCBI BLink). & (q42698|ggpps_catro : 384.0) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Catharanthu & (gnl|cdd|35995 : 304.0) no description available & (gnl|cdd|84711 : 212.0) no description available & (reliability: 772.0) & (original description: Putative GGPP4, Description = Geranylgeranyl pyrophosphate synthase 4, PFAM = PF00348)' T '16.1.1.10' 'secondary metabolism.isoprenoids.non-mevalonate pathway.geranylgeranyl pyrophosphate synthase' 'niben101scf00929_358852-361949' '(p80042|ggpps_capan : 598.0) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Capsicum an & (at4g36810 : 451.0) Encodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots.; geranylgeranyl pyrophosphate synthase 1 (GGPS1); FUNCTIONS IN: farnesyltranstransferase activity; INVOLVED IN: isoprenoid biosynthetic process; LOCATED IN: etioplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: Terpenoid synthases superfamily protein (TAIR:AT2G18620.1); Has 16617 Blast hits to 16612 proteins in 2936 species: Archae - 341; Bacteria - 9385; Metazoa - 291; Fungi - 423; Plants - 452; Viruses - 12; Other Eukaryotes - 5713 (source: NCBI BLink). & (gnl|cdd|35995 : 358.0) no description available & (gnl|cdd|84711 : 264.0) no description available & (reliability: 902.0) & (original description: Putative GGPS1, Description = Geranylgeranyl pyrophosphate synthase, chloroplastic, PFAM = PF00348)' T '16.1.1.10' 'secondary metabolism.isoprenoids.non-mevalonate pathway.geranylgeranyl pyrophosphate synthase' 'niben101scf02387_392621-395451' '(at4g38460 : 133.0) geranylgeranyl reductase (GGR); INVOLVED IN: isoprenoid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: geranylgeranyl pyrophosphate synthase 1 (TAIR:AT4G36810.1); Has 14555 Blast hits to 14554 proteins in 2890 species: Archae - 343; Bacteria - 9127; Metazoa - 134; Fungi - 165; Plants - 435; Viruses - 12; Other Eukaryotes - 4339 (source: NCBI BLink). & (q94id7|ggpps_hevbr : 117.0) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Hevea brasiliensis & (gnl|cdd|35995 : 95.8) no description available & (gnl|cdd|58339 : 94.9) no description available & (reliability: 266.0) & (original description: Putative IDS2, Description = Geranyl diphosphate synthase, PFAM = PF00348)' T '16.1.1.10' 'secondary metabolism.isoprenoids.non-mevalonate pathway.geranylgeranyl pyrophosphate synthase' 'niben101scf02772_88842-92152' '(q42698|ggpps_catro : 384.0) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Catharanthu & (at4g36810 : 382.0) Encodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots.; geranylgeranyl pyrophosphate synthase 1 (GGPS1); FUNCTIONS IN: farnesyltranstransferase activity; INVOLVED IN: isoprenoid biosynthetic process; LOCATED IN: etioplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: Terpenoid synthases superfamily protein (TAIR:AT2G18620.1); Has 16617 Blast hits to 16612 proteins in 2936 species: Archae - 341; Bacteria - 9385; Metazoa - 291; Fungi - 423; Plants - 452; Viruses - 12; Other Eukaryotes - 5713 (source: NCBI BLink). & (gnl|cdd|35995 : 306.0) no description available & (gnl|cdd|84711 : 209.0) no description available & (reliability: 764.0) & (original description: Putative crtE, Description = Geranylgeranyl pyrophosphate synthase, PFAM = PF00348)' T '16.1.1.10' 'secondary metabolism.isoprenoids.non-mevalonate pathway.geranylgeranyl pyrophosphate synthase' 'niben101scf10468_113804-118884' '(at4g36810 : 395.0) Encodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots.; geranylgeranyl pyrophosphate synthase 1 (GGPS1); FUNCTIONS IN: farnesyltranstransferase activity; INVOLVED IN: isoprenoid biosynthetic process; LOCATED IN: etioplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: Terpenoid synthases superfamily protein (TAIR:AT2G18620.1); Has 16617 Blast hits to 16612 proteins in 2936 species: Archae - 341; Bacteria - 9385; Metazoa - 291; Fungi - 423; Plants - 452; Viruses - 12; Other Eukaryotes - 5713 (source: NCBI BLink). & (q43133|ggpps_sinal : 395.0) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Sinapis alb & (gnl|cdd|35995 : 336.0) no description available & (gnl|cdd|84711 : 261.0) no description available & (reliability: 790.0) & (original description: Putative GGPS, Description = Geranylgeranyl pyrophosphate synthase, chloroplastic, PFAM = PF00348)' T '16.1.1.10' 'secondary metabolism.isoprenoids.non-mevalonate pathway.geranylgeranyl pyrophosphate synthase' 'niben101scf13146_127437-131501' '(at4g38460 : 390.0) geranylgeranyl reductase (GGR); INVOLVED IN: isoprenoid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: geranylgeranyl pyrophosphate synthase 1 (TAIR:AT4G36810.1); Has 14555 Blast hits to 14554 proteins in 2890 species: Archae - 343; Bacteria - 9127; Metazoa - 134; Fungi - 165; Plants - 435; Viruses - 12; Other Eukaryotes - 4339 (source: NCBI BLink). & (gnl|cdd|35995 : 257.0) no description available & (q43133|ggpps_sinal : 247.0) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Sinapis alb & (gnl|cdd|30491 : 183.0) no description available & (reliability: 780.0) & (original description: Putative GGR, Description = Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic, PFAM = PF00348)' T '16.1.1.10' 'secondary metabolism.isoprenoids.non-mevalonate pathway.geranylgeranyl pyrophosphate synthase' 'niben101scf13710_436297-439385' '(q42698|ggpps_catro : 486.0) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Catharanthu & (at4g36810 : 436.0) Encodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots.; geranylgeranyl pyrophosphate synthase 1 (GGPS1); FUNCTIONS IN: farnesyltranstransferase activity; INVOLVED IN: isoprenoid biosynthetic process; LOCATED IN: etioplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: Terpenoid synthases superfamily protein (TAIR:AT2G18620.1); Has 16617 Blast hits to 16612 proteins in 2936 species: Archae - 341; Bacteria - 9385; Metazoa - 291; Fungi - 423; Plants - 452; Viruses - 12; Other Eukaryotes - 5713 (source: NCBI BLink). & (gnl|cdd|35995 : 354.0) no description available & (gnl|cdd|84711 : 260.0) no description available & (reliability: 872.0) & (original description: Putative GGPS1, Description = Geranylgeranyl pyrophosphate synthase, chloroplastic, PFAM = PF00348)' T '16.1.1.1010' 'secondary metabolism.isoprenoids.mevalonate pathway' 'geranylgeranyl pyrophosphate' '' M '16.1.1.1011' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'beta-ionone' '' M '16.1.1.1012' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'beta-damascenone' '' M '16.1.1.1013' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'pseudoionone' '' M '16.1.1.1014' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'geranylacetone' '' M '16.1.2' 'secondary metabolism.isoprenoids.mevalonate pathway' '' '' '16.1.2.1' 'secondary metabolism.isoprenoids.mevalonate pathway.acetyl-CoA C-acyltransferase' 'niben101scf04727_328978-336149' '(at5g48230 : 553.0) acetoacetyl-CoA thiolase 2 (ACAT2); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acetyl-CoA C-acetyltransferase activity, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: peroxisome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: Thiolase family protein (TAIR:AT5G47720.4); Has 23891 Blast hits to 23860 proteins in 2352 species: Archae - 483; Bacteria - 15387; Metazoa - 1000; Fungi - 680; Plants - 248; Viruses - 0; Other Eukaryotes - 6093 (source: NCBI BLink). & (gnl|cdd|36604 : 541.0) no description available & (gnl|cdd|29411 : 455.0) no description available & (reliability: 1106.0) & (original description: Putative atoB, Description = Acetyl-CoA C-acetyltransferase, PFAM = PF00108;PF02803)' T '16.1.2.1' 'secondary metabolism.isoprenoids.mevalonate pathway.acetyl-CoA C-acyltransferase' 'niben101scf05433_32179-39133' '(at5g48230 : 577.0) acetoacetyl-CoA thiolase 2 (ACAT2); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acetyl-CoA C-acetyltransferase activity, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: peroxisome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: Thiolase family protein (TAIR:AT5G47720.4); Has 23891 Blast hits to 23860 proteins in 2352 species: Archae - 483; Bacteria - 15387; Metazoa - 1000; Fungi - 680; Plants - 248; Viruses - 0; Other Eukaryotes - 6093 (source: NCBI BLink). & (gnl|cdd|36604 : 549.0) no description available & (gnl|cdd|29411 : 461.0) no description available & (reliability: 1154.0) & (original description: Putative AAT1, Description = Acetyl-CoA acetyltransferase, cytosolic 1, PFAM = PF02803;PF00108)' T '16.1.2.1' 'secondary metabolism.isoprenoids.mevalonate pathway.acetyl-CoA C-acyltransferase' 'niben101scf06423_199340-207955' '(at5g47720 : 599.0) Thiolase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acetyl-CoA C-acetyltransferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039); BEST Arabidopsis thaliana protein match is: acetoacetyl-CoA thiolase 2 (TAIR:AT5G48230.2); Has 23291 Blast hits to 23276 proteins in 2315 species: Archae - 454; Bacteria - 14875; Metazoa - 988; Fungi - 698; Plants - 252; Viruses - 0; Other Eukaryotes - 6024 (source: NCBI BLink). & (gnl|cdd|36604 : 547.0) no description available & (gnl|cdd|29411 : 460.0) no description available & (reliability: 1198.0) & (original description: Putative atoB, Description = Acetyl-CoA acetyltransferase, PFAM = PF02803;PF00108)' T '16.1.2.2' 'secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA synthase' 'nbv0.5scaffold2914_100754-106085' '(at4g11820 : 691.0) Encodes a protein with hydroxymethylglutaryl-CoA synthase activity which was characterized by phenotypical complementation of the S. cerevisiae mutant.; MVA1; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Hydroxymethylglutaryl-coenzyme A synthase C-terminal (InterPro:IPR013746), Hydroxymethylglutaryl-coenzyme A synthase, N-terminal (InterPro:IPR013528), Hydroxymethylglutaryl-CoA synthase, eukaryotic (InterPro:IPR010122), Hydroxymethylglutaryl-coenzyme A synthase, active site (InterPro:IPR000590); Has 2176 Blast hits to 2172 proteins in 850 species: Archae - 228; Bacteria - 1039; Metazoa - 300; Fungi - 184; Plants - 117; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|36607 : 549.0) no description available & (gnl|cdd|80208 : 389.0) no description available & (reliability: 1382.0) & (original description: Putative HMGS, Description = Hydroxymethylglutaryl-CoA synthase, PFAM = PF01154;PF08540)' T '16.1.2.2' 'secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA synthase' 'niben044scf00017912ctg006_1342-8286' '(at4g11820 : 752.0) Encodes a protein with hydroxymethylglutaryl-CoA synthase activity which was characterized by phenotypical complementation of the S. cerevisiae mutant.; MVA1; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Hydroxymethylglutaryl-coenzyme A synthase C-terminal (InterPro:IPR013746), Hydroxymethylglutaryl-coenzyme A synthase, N-terminal (InterPro:IPR013528), Hydroxymethylglutaryl-CoA synthase, eukaryotic (InterPro:IPR010122), Hydroxymethylglutaryl-coenzyme A synthase, active site (InterPro:IPR000590); Has 2176 Blast hits to 2172 proteins in 850 species: Archae - 228; Bacteria - 1039; Metazoa - 300; Fungi - 184; Plants - 117; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|36607 : 632.0) no description available & (gnl|cdd|80208 : 393.0) no description available & (reliability: 1504.0) & (original description: Putative HMGS, Description = Hydroxymethylglutaryl-CoA synthase, PFAM = PF08540;PF01154)' T '16.1.2.2' 'secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA synthase' 'niben101scf01111_94686-101336' '(at4g11820 : 744.0) Encodes a protein with hydroxymethylglutaryl-CoA synthase activity which was characterized by phenotypical complementation of the S. cerevisiae mutant.; MVA1; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Hydroxymethylglutaryl-coenzyme A synthase C-terminal (InterPro:IPR013746), Hydroxymethylglutaryl-coenzyme A synthase, N-terminal (InterPro:IPR013528), Hydroxymethylglutaryl-CoA synthase, eukaryotic (InterPro:IPR010122), Hydroxymethylglutaryl-coenzyme A synthase, active site (InterPro:IPR000590); Has 2176 Blast hits to 2172 proteins in 850 species: Archae - 228; Bacteria - 1039; Metazoa - 300; Fungi - 184; Plants - 117; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|36607 : 628.0) no description available & (gnl|cdd|80208 : 388.0) no description available & (reliability: 1488.0) & (original description: Putative HMGS, Description = Hydroxymethylglutaryl-CoA synthase, PFAM = PF08540;PF01154)' T '16.1.2.2' 'secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA synthase' 'niben101scf02361_157334-163999' '(at4g11820 : 798.0) Encodes a protein with hydroxymethylglutaryl-CoA synthase activity which was characterized by phenotypical complementation of the S. cerevisiae mutant.; MVA1; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Hydroxymethylglutaryl-coenzyme A synthase C-terminal (InterPro:IPR013746), Hydroxymethylglutaryl-coenzyme A synthase, N-terminal (InterPro:IPR013528), Hydroxymethylglutaryl-CoA synthase, eukaryotic (InterPro:IPR010122), Hydroxymethylglutaryl-coenzyme A synthase, active site (InterPro:IPR000590); Has 2176 Blast hits to 2172 proteins in 850 species: Archae - 228; Bacteria - 1039; Metazoa - 300; Fungi - 184; Plants - 117; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|36607 : 637.0) no description available & (gnl|cdd|80208 : 390.0) no description available & (reliability: 1596.0) & (original description: Putative HMGS, Description = Hydroxymethylglutaryl-CoA synthase, PFAM = PF01154;PF08540)' T '16.1.2.2' 'secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA synthase' 'niben101scf03321_101099-107212' '(at4g11820 : 794.0) Encodes a protein with hydroxymethylglutaryl-CoA synthase activity which was characterized by phenotypical complementation of the S. cerevisiae mutant.; MVA1; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Hydroxymethylglutaryl-coenzyme A synthase C-terminal (InterPro:IPR013746), Hydroxymethylglutaryl-coenzyme A synthase, N-terminal (InterPro:IPR013528), Hydroxymethylglutaryl-CoA synthase, eukaryotic (InterPro:IPR010122), Hydroxymethylglutaryl-coenzyme A synthase, active site (InterPro:IPR000590); Has 2176 Blast hits to 2172 proteins in 850 species: Archae - 228; Bacteria - 1039; Metazoa - 300; Fungi - 184; Plants - 117; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|36607 : 637.0) no description available & (gnl|cdd|80208 : 393.0) no description available & (reliability: 1588.0) & (original description: Putative HMGS, Description = Hydroxymethylglutaryl-CoA synthase, PFAM = PF01154;PF08540)' T '16.1.2.2' 'secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA synthase' 'niben101scf10595_110714-116682' '(at4g11820 : 788.0) Encodes a protein with hydroxymethylglutaryl-CoA synthase activity which was characterized by phenotypical complementation of the S. cerevisiae mutant.; MVA1; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Hydroxymethylglutaryl-coenzyme A synthase C-terminal (InterPro:IPR013746), Hydroxymethylglutaryl-coenzyme A synthase, N-terminal (InterPro:IPR013528), Hydroxymethylglutaryl-CoA synthase, eukaryotic (InterPro:IPR010122), Hydroxymethylglutaryl-coenzyme A synthase, active site (InterPro:IPR000590); Has 2176 Blast hits to 2172 proteins in 850 species: Archae - 228; Bacteria - 1039; Metazoa - 300; Fungi - 184; Plants - 117; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|36607 : 637.0) no description available & (gnl|cdd|80208 : 392.0) no description available & (reliability: 1576.0) & (original description: Putative HMGS, Description = Hydroxymethylglutaryl-CoA synthase, PFAM = PF08540;PF01154)' T '16.1.2.3' 'secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA reductase' 'nbv0.3scaffold74187_4115-8359' '(q01559|hmdh_nicsy : 1145.0) 3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC 1.1.1.34) (HMG-CoA reductase) - Nicotiana sylvestris (Wood tobacco) & (at1g76490 : 815.0) Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine; hydroxy methylglutaryl CoA reductase 1 (HMG1); CONTAINS InterPro DOMAIN/s: Hydroxymethylglutaryl-CoA reductase, class I, catalytic (InterPro:IPR004554), Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding (InterPro:IPR009029), Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding (InterPro:IPR009023), Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic (InterPro:IPR002202); BEST Arabidopsis thaliana protein match is: 3-hydroxy-3-methylglutaryl-CoA reductase 2 (TAIR:AT2G17370.1); Has 2212 Blast hits to 2210 proteins in 935 species: Archae - 202; Bacteria - 1018; Metazoa - 225; Fungi - 225; Plants - 266; Viruses - 1; Other Eukaryotes - 275 (source: NCBI BLink). & (gnl|cdd|37691 : 730.0) no description available & (gnl|cdd|64245 : 681.0) no description available & (reliability: 1630.0) & (original description: Putative HMGR, Description = 3-hydroxy-3-methylglutaryl-coenzyme A reductase, PFAM = PF00368)' T '16.1.2.3' 'secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA reductase' 'niben101scf00163_174431-180038' '(p29057|hmdh1_hevbr : 840.0) 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 (EC 1.1.1.34) (HMG-CoA reductase 1) - Hevea brasiliensis (Para rubber tree) & (at1g76490 : 806.0) Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine; hydroxy methylglutaryl CoA reductase 1 (HMG1); CONTAINS InterPro DOMAIN/s: Hydroxymethylglutaryl-CoA reductase, class I, catalytic (InterPro:IPR004554), Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding (InterPro:IPR009029), Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding (InterPro:IPR009023), Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic (InterPro:IPR002202); BEST Arabidopsis thaliana protein match is: 3-hydroxy-3-methylglutaryl-CoA reductase 2 (TAIR:AT2G17370.1); Has 2212 Blast hits to 2210 proteins in 935 species: Archae - 202; Bacteria - 1018; Metazoa - 225; Fungi - 225; Plants - 266; Viruses - 1; Other Eukaryotes - 275 (source: NCBI BLink). & (gnl|cdd|37691 : 736.0) no description available & (gnl|cdd|64245 : 676.0) no description available & (reliability: 1612.0) & (original description: Putative HMGR1, Description = 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1, PFAM = PF00368)' T '16.1.2.3' 'secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA reductase' 'niben101scf02203_562900-567808' '(q01559|hmdh_nicsy : 1120.0) 3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC 1.1.1.34) (HMG-CoA reductase) - Nicotiana sylvestris (Wood tobacco) & (at1g76490 : 811.0) Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine; hydroxy methylglutaryl CoA reductase 1 (HMG1); CONTAINS InterPro DOMAIN/s: Hydroxymethylglutaryl-CoA reductase, class I, catalytic (InterPro:IPR004554), Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding (InterPro:IPR009029), Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding (InterPro:IPR009023), Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic (InterPro:IPR002202); BEST Arabidopsis thaliana protein match is: 3-hydroxy-3-methylglutaryl-CoA reductase 2 (TAIR:AT2G17370.1); Has 2212 Blast hits to 2210 proteins in 935 species: Archae - 202; Bacteria - 1018; Metazoa - 225; Fungi - 225; Plants - 266; Viruses - 1; Other Eukaryotes - 275 (source: NCBI BLink). & (gnl|cdd|37691 : 727.0) no description available & (gnl|cdd|64245 : 679.0) no description available & (reliability: 1622.0) & (original description: Putative HMGR, Description = 3-hydroxy-3-methylglutaryl-coenzyme A reductase, PFAM = PF00368)' T '16.1.2.3' 'secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA reductase' 'niben101scf09883_235715-240905' '(p29057|hmdh1_hevbr : 829.0) 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 (EC 1.1.1.34) (HMG-CoA reductase 1) - Hevea brasiliensis (Para rubber tree) & (at1g76490 : 798.0) Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine; hydroxy methylglutaryl CoA reductase 1 (HMG1); CONTAINS InterPro DOMAIN/s: Hydroxymethylglutaryl-CoA reductase, class I, catalytic (InterPro:IPR004554), Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding (InterPro:IPR009029), Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding (InterPro:IPR009023), Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic (InterPro:IPR002202); BEST Arabidopsis thaliana protein match is: 3-hydroxy-3-methylglutaryl-CoA reductase 2 (TAIR:AT2G17370.1); Has 2212 Blast hits to 2210 proteins in 935 species: Archae - 202; Bacteria - 1018; Metazoa - 225; Fungi - 225; Plants - 266; Viruses - 1; Other Eukaryotes - 275 (source: NCBI BLink). & (gnl|cdd|37691 : 735.0) no description available & (gnl|cdd|64245 : 677.0) no description available & (reliability: 1596.0) & (original description: Putative HMG1, Description = 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1, PFAM = PF00368)' T '16.1.2.3' 'secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA reductase' 'niben101scf13180_163376-168563' '(p48020|hmdh1_soltu : 1046.0) 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 (EC 1.1.1.34) (HMG-CoA reductase 1) (HMGR1) (HMGR) - Solanum tuberosum (Potato) & (at1g76490 : 811.0) Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine; hydroxy methylglutaryl CoA reductase 1 (HMG1); CONTAINS InterPro DOMAIN/s: Hydroxymethylglutaryl-CoA reductase, class I, catalytic (InterPro:IPR004554), Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding (InterPro:IPR009029), Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding (InterPro:IPR009023), Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic (InterPro:IPR002202); BEST Arabidopsis thaliana protein match is: 3-hydroxy-3-methylglutaryl-CoA reductase 2 (TAIR:AT2G17370.1); Has 2212 Blast hits to 2210 proteins in 935 species: Archae - 202; Bacteria - 1018; Metazoa - 225; Fungi - 225; Plants - 266; Viruses - 1; Other Eukaryotes - 275 (source: NCBI BLink). & (gnl|cdd|37691 : 729.0) no description available & (gnl|cdd|64245 : 681.0) no description available & (reliability: 1622.0) & (original description: Putative HMG1, Description = 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1, PFAM = PF00368)' T '16.1.2.4' 'secondary metabolism.isoprenoids.mevalonate pathway.mevalonate kinase' 'niben044scf00023398ctg003_1-5286' '(at5g27450 : 386.0) Encodes a protein with mevalonate kinase activity involved in the mevalonate pathway.; mevalonate kinase (MK); FUNCTIONS IN: mevalonate kinase activity; INVOLVED IN: isoprenoid biosynthetic process, metabolic process, phosphorylation; LOCATED IN: cytoplasm; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate kinase (InterPro:IPR006205), GHMP kinase, ATP-binding, conserved site (InterPro:IPR006203), Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750). & (gnl|cdd|36724 : 347.0) no description available & (gnl|cdd|31765 : 179.0) no description available & (reliability: 772.0) & (original description: Putative MVK, Description = Mevalonate kinase, PFAM = PF08544;PF00288)' T '16.1.2.4' 'secondary metabolism.isoprenoids.mevalonate pathway.mevalonate kinase' 'niben101scf00370_380946-387326' '(at5g27450 : 403.0) Encodes a protein with mevalonate kinase activity involved in the mevalonate pathway.; mevalonate kinase (MK); FUNCTIONS IN: mevalonate kinase activity; INVOLVED IN: isoprenoid biosynthetic process, metabolic process, phosphorylation; LOCATED IN: cytoplasm; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate kinase (InterPro:IPR006205), GHMP kinase, ATP-binding, conserved site (InterPro:IPR006203), Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750). & (gnl|cdd|36724 : 371.0) no description available & (gnl|cdd|31765 : 179.0) no description available & (reliability: 806.0) & (original description: Putative mvk, Description = Mevalonate kinase, PFAM = PF08544;PF00288)' T '16.1.2.5' 'secondary metabolism.isoprenoids.mevalonate pathway.phosphomevalonate kinase' 'niben101scf01202_143548-153105' '(at1g31910 : 233.0) GHMP kinase family protein; FUNCTIONS IN: kinase activity, ATP binding; INVOLVED IN: phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphomevalonate kinase, eukaryotic (InterPro:IPR005916), Phosphomevalonate kinase, ERG8 (InterPro:IPR016005), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721). & (gnl|cdd|39719 : 182.0) no description available & (reliability: 466.0) & (original description: Putative PMK, Description = Phosphomevalonate kinase, PFAM = PF08544)' T '16.1.2.5' 'secondary metabolism.isoprenoids.mevalonate pathway.phosphomevalonate kinase' 'niben101scf07030_403925-418187' '(at1g31910 : 574.0) GHMP kinase family protein; FUNCTIONS IN: kinase activity, ATP binding; INVOLVED IN: phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphomevalonate kinase, eukaryotic (InterPro:IPR005916), Phosphomevalonate kinase, ERG8 (InterPro:IPR016005), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721). & (gnl|cdd|39719 : 505.0) no description available & (gnl|cdd|33679 : 125.0) no description available & (reliability: 1148.0) & (original description: Putative PMK, Description = Phosphomevalonate kinase, PFAM = PF00288;PF08544)' T '16.1.2.6' 'secondary metabolism.isoprenoids.mevalonate pathway.mevalonate diphosphate decarboxylase' 'nbv0.3scaffold26230_8933-19359' '(at3g54250 : 664.0) GHMP kinase family protein; FUNCTIONS IN: diphosphomevalonate decarboxylase activity, kinase activity, ATP binding; INVOLVED IN: isoprenoid biosynthetic process, phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Diphosphomevalonate decarboxylase (InterPro:IPR005935), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: mevalonate diphosphate decarboxylase 1 (TAIR:AT2G38700.1); Has 1522 Blast hits to 1521 proteins in 681 species: Archae - 55; Bacteria - 885; Metazoa - 122; Fungi - 149; Plants - 60; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (gnl|cdd|38044 : 537.0) no description available & (gnl|cdd|33213 : 264.0) no description available & (reliability: 1328.0) & (original description: Putative MVD2, Description = Diphosphomevalonate decarboxylase MVD2, PFAM = PF00288)' T '16.1.2.6' 'secondary metabolism.isoprenoids.mevalonate pathway.mevalonate diphosphate decarboxylase' 'niben044scf00010403ctg002_40949-43282' '(at3g54250 : 160.0) GHMP kinase family protein; FUNCTIONS IN: diphosphomevalonate decarboxylase activity, kinase activity, ATP binding; INVOLVED IN: isoprenoid biosynthetic process, phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Diphosphomevalonate decarboxylase (InterPro:IPR005935), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: mevalonate diphosphate decarboxylase 1 (TAIR:AT2G38700.1); Has 1522 Blast hits to 1521 proteins in 681 species: Archae - 55; Bacteria - 885; Metazoa - 122; Fungi - 149; Plants - 60; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative MVAPPD, Description = Putative phosphomevalonate kinase, PFAM = )' T '16.1.2.6' 'secondary metabolism.isoprenoids.mevalonate pathway.mevalonate diphosphate decarboxylase' 'niben101scf00173_537297-559933' '(at3g54250 : 673.0) GHMP kinase family protein; FUNCTIONS IN: diphosphomevalonate decarboxylase activity, kinase activity, ATP binding; INVOLVED IN: isoprenoid biosynthetic process, phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Diphosphomevalonate decarboxylase (InterPro:IPR005935), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: mevalonate diphosphate decarboxylase 1 (TAIR:AT2G38700.1); Has 1522 Blast hits to 1521 proteins in 681 species: Archae - 55; Bacteria - 885; Metazoa - 122; Fungi - 149; Plants - 60; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (gnl|cdd|38044 : 540.0) no description available & (gnl|cdd|33213 : 269.0) no description available & (reliability: 1346.0) & (original description: Putative MVD2, Description = Diphosphomevalonate decarboxylase MVD2, PFAM = PF00288)' T '16.1.2.7' 'secondary metabolism.isoprenoids.mevalonate pathway.isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase' 'nbv0.5scaffold667_257273-343815' '(at3g02780 : 347.0) Encodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. There is genetic evidence that it functions in the mevalonate, but not the MEP biosynthetic pathway.; isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2 (IPP2); FUNCTIONS IN: isopentenyl-diphosphate delta-isomerase activity; INVOLVED IN: chlorophyll biosynthetic process, flower development, isoprenoid biosynthetic process; LOCATED IN: cytosol, mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086), Isopentenyl-diphosphate delta-isomerase, type 1 (InterPro:IPR011876); BEST Arabidopsis thaliana protein match is: isopentenyl diphosphate isomerase 1 (TAIR:AT5G16440.1); Has 2187 Blast hits to 2186 proteins in 784 species: Archae - 35; Bacteria - 1163; Metazoa - 210; Fungi - 137; Plants - 180; Viruses - 0; Other Eukaryotes - 462 (source: NCBI BLink). & (gnl|cdd|35364 : 269.0) no description available & (gnl|cdd|72881 : 185.0) no description available & (reliability: 694.0) & (original description: Putative ipi, Description = Putative isopentenylpyrophosphate isomerase, PFAM = PF00293)' T '16.1.2.7' 'secondary metabolism.isoprenoids.mevalonate pathway.isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase' 'niben101scf01514_379875-421441' '(at5g16440 : 434.0) Encodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. There is genetic evidence that it functions in the mevalonate, but not the MEP biosynthetic pathway.; isopentenyl diphosphate isomerase 1 (IPP1); FUNCTIONS IN: isopentenyl-diphosphate delta-isomerase activity; INVOLVED IN: chlorophyll biosynthetic process, isoprenoid biosynthetic process, isopentenyl diphosphate biosynthetic process; LOCATED IN: cytosol, chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086), Isopentenyl-diphosphate delta-isomerase, type 1 (InterPro:IPR011876); BEST Arabidopsis thaliana protein match is: isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2 (TAIR:AT3G02780.1); Has 2226 Blast hits to 2225 proteins in 801 species: Archae - 35; Bacteria - 1199; Metazoa - 210; Fungi - 137; Plants - 180; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (gnl|cdd|35364 : 331.0) no description available & (gnl|cdd|72881 : 215.0) no description available & (reliability: 868.0) & (original description: Putative ipi1, Description = Isopentenyl diphosphate isomerase 1, PFAM = PF00293)' T '16.1.2.7' 'secondary metabolism.isoprenoids.mevalonate pathway.isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase' 'niben101scf02499_381218-390569' '(at3g02780 : 426.0) Encodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. There is genetic evidence that it functions in the mevalonate, but not the MEP biosynthetic pathway.; isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2 (IPP2); FUNCTIONS IN: isopentenyl-diphosphate delta-isomerase activity; INVOLVED IN: chlorophyll biosynthetic process, flower development, isoprenoid biosynthetic process; LOCATED IN: cytosol, mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086), Isopentenyl-diphosphate delta-isomerase, type 1 (InterPro:IPR011876); BEST Arabidopsis thaliana protein match is: isopentenyl diphosphate isomerase 1 (TAIR:AT5G16440.1); Has 2187 Blast hits to 2186 proteins in 784 species: Archae - 35; Bacteria - 1163; Metazoa - 210; Fungi - 137; Plants - 180; Viruses - 0; Other Eukaryotes - 462 (source: NCBI BLink). & (gnl|cdd|35364 : 328.0) no description available & (gnl|cdd|72881 : 215.0) no description available & (reliability: 852.0) & (original description: Putative ipi1, Description = Isopentenyl diphosphate isomerase 1, PFAM = PF00293)' T '16.1.2.7' 'secondary metabolism.isoprenoids.mevalonate pathway.isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase' 'niben101scf05848_574706-586332' '(at5g16440 : 427.0) Encodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. There is genetic evidence that it functions in the mevalonate, but not the MEP biosynthetic pathway.; isopentenyl diphosphate isomerase 1 (IPP1); FUNCTIONS IN: isopentenyl-diphosphate delta-isomerase activity; INVOLVED IN: chlorophyll biosynthetic process, isoprenoid biosynthetic process, isopentenyl diphosphate biosynthetic process; LOCATED IN: cytosol, chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086), Isopentenyl-diphosphate delta-isomerase, type 1 (InterPro:IPR011876); BEST Arabidopsis thaliana protein match is: isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2 (TAIR:AT3G02780.1); Has 2226 Blast hits to 2225 proteins in 801 species: Archae - 35; Bacteria - 1199; Metazoa - 210; Fungi - 137; Plants - 180; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (gnl|cdd|35364 : 325.0) no description available & (gnl|cdd|72881 : 215.0) no description available & (reliability: 854.0) & (original description: Putative IPI1, Description = Isopentenyl-diphosphate Delta-isomerase I, PFAM = PF00293)' T '16.1.2.8' 'secondary metabolism.isoprenoids.mevalonate pathway.geranyl diphosphate synthase' 'nbv0.3scaffold2137_5565-18049' '(at2g34630 : 438.0) Encodes a geranyl diphosphate synthase. RNAi lines are dwarf. T-DNA knock-out lines are embryo lethal.; geranyl diphosphate synthase 1 (GPS1); CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: solanesyl diphosphate synthase 2 (TAIR:AT1G17050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35995 : 284.0) no description available & (gnl|cdd|30491 : 207.0) no description available & (q94id7|ggpps_hevbr : 91.3) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Hevea brasiliensis & (reliability: 876.0) & (original description: Putative gppS, Description = Geranyl diphosphat synthase, PFAM = PF00348)' T '16.1.2.8' 'secondary metabolism.isoprenoids.mevalonate pathway.geranyl diphosphate synthase' 'niben101scf00885_1964438-1977068' '(at2g34630 : 544.0) Encodes a geranyl diphosphate synthase. RNAi lines are dwarf. T-DNA knock-out lines are embryo lethal.; geranyl diphosphate synthase 1 (GPS1); CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: solanesyl diphosphate synthase 2 (TAIR:AT1G17050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35995 : 295.0) no description available & (gnl|cdd|30491 : 231.0) no description available & (q94id7|ggpps_hevbr : 90.9) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Hevea brasiliensis & (reliability: 1088.0) & (original description: Putative gppS, Description = Geranyl diphosphat synthase, PFAM = PF00348)' T '16.1.2.8' 'secondary metabolism.isoprenoids.mevalonate pathway.geranyl diphosphate synthase' 'niben101scf04741_597121-603609' '(at1g78510 : 521.0) Encodes a protein with solanesyl diphosphate synthase activity.; solanesyl diphosphate synthase 1 (SPS1); CONTAINS InterPro DOMAIN/s: Solanesyl diphosphate synthase (InterPro:IPR014120), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase-related (InterPro:IPR017446), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: solanesyl diphosphate synthase 2 (TAIR:AT1G17050.1); Has 16694 Blast hits to 16671 proteins in 2946 species: Archae - 341; Bacteria - 9481; Metazoa - 459; Fungi - 560; Plants - 421; Viruses - 0; Other Eukaryotes - 5432 (source: NCBI BLink). & (gnl|cdd|35995 : 323.0) no description available & (gnl|cdd|30491 : 261.0) no description available & (q43133|ggpps_sinal : 133.0) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Sinapis alb & (reliability: 1026.0) & (original description: Putative SPS1, Description = Solanesyl diphosphate synthase 1, PFAM = PF00348)' T '16.1.2.8' 'secondary metabolism.isoprenoids.mevalonate pathway.geranyl diphosphate synthase' 'niben101scf17922_166620-180182' '(at2g34630 : 535.0) Encodes a geranyl diphosphate synthase. RNAi lines are dwarf. T-DNA knock-out lines are embryo lethal.; geranyl diphosphate synthase 1 (GPS1); CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: solanesyl diphosphate synthase 2 (TAIR:AT1G17050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35995 : 294.0) no description available & (gnl|cdd|30491 : 230.0) no description available & (q94id7|ggpps_hevbr : 90.5) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Hevea brasiliensis & (reliability: 1070.0) & (original description: Putative gppS, Description = Geranyl diphosphat synthase, PFAM = PF00348)' T '16.1.2.9' 'secondary metabolism.isoprenoids.mevalonate pathway.farnesyl pyrophosphate synthetase' 'niben044scf00011481ctg019_538-5775' '(o64905|fpps_helan : 518.0) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] - Helianthus annuus (Common sunflower) & (at5g47770 : 507.0) Encodes a protein with farnesyl diphosphate synthase activity.; farnesyl diphosphate synthase 1 (FPS1); FUNCTIONS IN: dimethylallyltranstransferase activity, geranyltranstransferase activity; INVOLVED IN: farnesyl diphosphate biosynthetic process, isoprenoid biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: farnesyl diphosphate synthase 2 (TAIR:AT4G17190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35930 : 388.0) no description available & (gnl|cdd|84711 : 250.0) no description available & (reliability: 1014.0) & (original description: Putative fps1, Description = Farnesyl pyrophosphate synthase1, PFAM = PF00348)' T '16.1.2.9' 'secondary metabolism.isoprenoids.mevalonate pathway.farnesyl pyrophosphate synthetase' 'niben044scf00029252ctg008_2089-8096' '(at5g47770 : 563.0) Encodes a protein with farnesyl diphosphate synthase activity.; farnesyl diphosphate synthase 1 (FPS1); FUNCTIONS IN: dimethylallyltranstransferase activity, geranyltranstransferase activity; INVOLVED IN: farnesyl diphosphate biosynthetic process, isoprenoid biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: farnesyl diphosphate synthase 2 (TAIR:AT4G17190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o64905|fpps_helan : 563.0) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] - Helianthus annuus (Common sunflower) & (gnl|cdd|35930 : 422.0) no description available & (gnl|cdd|84711 : 256.0) no description available & (reliability: 1126.0) & (original description: Putative fps1, Description = Farnesyl pyrophosphate synthase, PFAM = PF00348)' T '16.1.2.9' 'secondary metabolism.isoprenoids.mevalonate pathway.farnesyl pyrophosphate synthetase' 'niben101scf04444_920163-928360' '(o64905|fpps_helan : 577.0) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] - Helianthus annuus (Common sunflower) & (at5g47770 : 566.0) Encodes a protein with farnesyl diphosphate synthase activity.; farnesyl diphosphate synthase 1 (FPS1); FUNCTIONS IN: dimethylallyltranstransferase activity, geranyltranstransferase activity; INVOLVED IN: farnesyl diphosphate biosynthetic process, isoprenoid biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: farnesyl diphosphate synthase 2 (TAIR:AT4G17190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35930 : 421.0) no description available & (gnl|cdd|84711 : 257.0) no description available & (reliability: 1132.0) & (original description: Putative fps, Description = Farnesyl diphosphate synthase, PFAM = PF00348)' T '16.1.2.9' 'secondary metabolism.isoprenoids.mevalonate pathway.farnesyl pyrophosphate synthetase' 'niben101scf04739_159558-165435' '(o64905|fpps_helan : 566.0) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] - Helianthus annuus (Common sunflower) & (at5g47770 : 565.0) Encodes a protein with farnesyl diphosphate synthase activity.; farnesyl diphosphate synthase 1 (FPS1); FUNCTIONS IN: dimethylallyltranstransferase activity, geranyltranstransferase activity; INVOLVED IN: farnesyl diphosphate biosynthetic process, isoprenoid biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: farnesyl diphosphate synthase 2 (TAIR:AT4G17190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35930 : 424.0) no description available & (gnl|cdd|84711 : 255.0) no description available & (reliability: 1130.0) & (original description: Putative fps1, Description = Farnesyl pyrophosphate synthase, PFAM = PF00348)' T '16.1.2.1001' 'secondary metabolism.isoprenoids.mevalonate pathway' 'mevalonate' '' M '16.1.2.1002' 'secondary metabolism.isoprenoids.mevalonate pathway' 'mevalonate-5-phosphate' '' M '16.1.2.1003' 'secondary metabolism.isoprenoids.mevalonate pathway' 'mevalonate-5-pyrophosphate' '' M '16.1.2.1004' 'secondary metabolism.isoprenoids.mevalonate pathway' 'isopentenyl-pyrophoshate' '' M '16.1.2.1005' 'secondary metabolism.isoprenoids.mevalonate pathway' 'dimethylallyl-pyrophosphate' '' M '16.1.2.1006' 'secondary metabolism.isoprenoids.mevalonate pathway' 'geranyl pyrophosphate' '' M '16.1.2.1007' 'secondary metabolism.isoprenoids.mevalonate pathway' 'neryl pyrophosphate' '' M '16.1.2.1008' 'secondary metabolism.isoprenoids.mevalonate pathway' 'farnesyl pyrophosphate' '' M '16.1.2.1009' 'secondary metabolism.isoprenoids.mevalonate pathway' 'sesquiterpene' '' M '16.1.2.1010' 'secondary metabolism.isoprenoids.mevalonate pathway' 'squalene' '' M '16.1.2.1011' 'secondary metabolism.isoprenoids.mevalonate pathway' 'linaloyl pyrophosphate' '' M '16.1.2.1012' 'secondary metabolism.isoprenoids.mevalonate pathway' 'alpha-pinene' '' M '16.1.2.1013' 'secondary metabolism.isoprenoids.mevalonate pathway' 'limonene' '' M '16.1.2.1014' 'secondary metabolism.isoprenoids.mevalonate pathway' 'beta-pinene' '' M '16.1.3' 'secondary metabolism.isoprenoids.tocopherol biosynthesis' 'nbv0.3scaffold35390_30862-36715' '(gnl|cdd|35480 : 547.0) no description available & (at5g53970 : 481.0) encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment; Tyrosine transaminase family protein; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G36160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30785 : 244.0) no description available & (p52894|ala2_horvu : 80.9) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (reliability: 956.0) & (original description: Putative tat, Description = Tyrosine aminotransferase, PFAM = PF00155)' T '16.1.3' 'secondary metabolism.isoprenoids.tocopherol biosynthesis' 'nbv0.3scaffold94806_486-3915' '(gnl|cdd|35480 : 401.0) no description available & (at5g53970 : 348.0) encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment; Tyrosine transaminase family protein; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G36160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30785 : 153.0) no description available & (reliability: 684.0) & (original description: Putative tat, Description = Tyrosine aminotransferase, PFAM = PF00155)' T '16.1.3' 'secondary metabolism.isoprenoids.tocopherol biosynthesis' 'niben044scf00013451ctg006_330-2784' '(gnl|cdd|35480 : 149.0) no description available & (at5g36160 : 138.0) Tyrosine transaminase family protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity; INVOLVED IN: tyrosine catabolic process to phosphoenolpyruvate, cellular amino acid and derivative metabolic process, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G53970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative tat, Description = Tyrosine aminotransferase, PFAM = PF00155)' T '16.1.3' 'secondary metabolism.isoprenoids.tocopherol biosynthesis' 'niben044scf00039677ctg008_765-4428' '(q2n2k1|phyk1_soybn : 330.0) Probable phytol kinase 1, chloroplast precursor (EC 2.7.-.-) - Glycine max (Soybean) & (at5g04490 : 304.0) Encodes a protein with phytol kinase activity involved in tocopherol biosynthesis.; vitamin E pathway gene 5 (VTE5); FUNCTIONS IN: phytol kinase activity, phosphatidate cytidylyltransferase activity; INVOLVED IN: vitamin E biosynthetic process, phospholipid biosynthetic process; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374); BEST Arabidopsis thaliana protein match is: Phosphatidate cytidylyltransferase family protein (TAIR:AT5G58560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39654 : 176.0) no description available & (reliability: 608.0) & (original description: Putative cdsA, Description = Phytol kinase, PFAM = )' T '16.1.3' 'secondary metabolism.isoprenoids.tocopherol biosynthesis' 'niben101scf00484_329571-343097' '(at3g11945 : 486.0) Encodes a protein involved in plastoquinone-9 biosynthesis. The enzyme possesses homogentisate prenyltransferase activity and was shown to use solanesyl diphosphate, farnesyl diphosphate and geranylgeranyldiphosphate as prenyl donors, but not phytyldiphosphate. This gene At3g11945 derives from a split of At3g11950, publications Tian et al (2007) and Sadre et al (2006) refer to this gene as At3g11950.; homogentisate prenyltransferase (HST); CONTAINS InterPro DOMAIN/s: UbiA prenyltransferase (InterPro:IPR000537); BEST Arabidopsis thaliana protein match is: homogentisate phytyltransferase 1 (TAIR:AT2G18950.1); Has 1367 Blast hits to 1364 proteins in 371 species: Archae - 252; Bacteria - 598; Metazoa - 1; Fungi - 4; Plants - 199; Viruses - 0; Other Eukaryotes - 313 (source: NCBI BLink). & (gnl|cdd|84373 : 213.0) no description available & (reliability: 972.0) & (original description: Putative HST, Description = Homogentisate solanesyltransferase, chloroplastic, PFAM = PF01040)' T '16.1.3' 'secondary metabolism.isoprenoids.tocopherol biosynthesis' 'niben101scf03035_445156-459418' '(gnl|cdd|35480 : 613.0) no description available & (at5g36160 : 513.0) Tyrosine transaminase family protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity; INVOLVED IN: tyrosine catabolic process to phosphoenolpyruvate, cellular amino acid and derivative metabolic process, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G53970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30785 : 217.0) no description available & (p52894|ala2_horvu : 82.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (reliability: 1026.0) & (original description: Putative TAT, Description = Tyrosine aminotransferase, PFAM = PF00155)' T '16.1.3' 'secondary metabolism.isoprenoids.tocopherol biosynthesis' 'niben101scf06338_71549-82081' '(gnl|cdd|35480 : 624.0) no description available & (at5g36160 : 552.0) Tyrosine transaminase family protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity; INVOLVED IN: tyrosine catabolic process to phosphoenolpyruvate, cellular amino acid and derivative metabolic process, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G53970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30785 : 228.0) no description available & (reliability: 1104.0) & (original description: Putative TAT, Description = Tyrosine aminotransferase, PFAM = PF00155)' T '16.1.3.1' 'secondary metabolism.isoprenoids.tocopherol biosynthesis.hydroxyphenylpyruvate dioxygenase' 'niben101scf00095_235350-244309' '(o23920|hppd_dauca : 606.0) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) - Daucus carota (Carrot) & (at1g06570 : 568.0) Mutation of the PDS1 locus disrupts the activity of p-hydroxyphenylpyruvate dioxygenase (HPPDase), the first committed step in the synthesis of both plastoquinone and tocopherols in plants.; phytoene desaturation 1 (PDS1); CONTAINS InterPro DOMAIN/s: 4-hydroxyphenylpyruvate dioxygenase (InterPro:IPR005956), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); Has 2393 Blast hits to 2392 proteins in 824 species: Archae - 3; Bacteria - 1672; Metazoa - 205; Fungi - 157; Plants - 91; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink). & (gnl|cdd|35857 : 396.0) no description available & (gnl|cdd|32998 : 185.0) no description available & (reliability: 1136.0) & (original description: Putative hppD, Description = 4-hydroxyphenylpyruvate dioxygenase, PFAM = PF00903)' T '16.1.3.1' 'secondary metabolism.isoprenoids.tocopherol biosynthesis.hydroxyphenylpyruvate dioxygenase' 'niben101scf26094_4334-14330' '(o23920|hppd_dauca : 591.0) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) - Daucus carota (Carrot) & (at1g06570 : 565.0) Mutation of the PDS1 locus disrupts the activity of p-hydroxyphenylpyruvate dioxygenase (HPPDase), the first committed step in the synthesis of both plastoquinone and tocopherols in plants.; phytoene desaturation 1 (PDS1); CONTAINS InterPro DOMAIN/s: 4-hydroxyphenylpyruvate dioxygenase (InterPro:IPR005956), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); Has 2393 Blast hits to 2392 proteins in 824 species: Archae - 3; Bacteria - 1672; Metazoa - 205; Fungi - 157; Plants - 91; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink). & (gnl|cdd|35857 : 395.0) no description available & (gnl|cdd|32998 : 179.0) no description available & (reliability: 1130.0) & (original description: Putative hppd, Description = 4-hydroxyphenylpyruvate dioxygenase, PFAM = PF00903)' T '16.1.3.2' 'secondary metabolism.isoprenoids.tocopherol biosynthesis.homogentisate phytyltransferase' 'nbv0.3scaffold31519_1594-22674' '(at2g18950 : 469.0) Encodes homogentisate phytyltransferase involved in tocopherol biosynthesis. Has impact on seed longevity and plays a role in the adaptation to low temperature stress, notably phloem loading.; homogentisate phytyltransferase 1 (HPT1); CONTAINS InterPro DOMAIN/s: UbiA prenyltransferase (InterPro:IPR000537); BEST Arabidopsis thaliana protein match is: homogentisate prenyltransferase (TAIR:AT3G11945.1); Has 1047 Blast hits to 1044 proteins in 315 species: Archae - 194; Bacteria - 477; Metazoa - 7; Fungi - 6; Plants - 190; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (gnl|cdd|84373 : 254.0) no description available & (reliability: 938.0) & (original description: Putative hpt, Description = Homogentisate phytyl transferase, PFAM = PF01040)' T '16.1.3.2' 'secondary metabolism.isoprenoids.tocopherol biosynthesis.homogentisate phytyltransferase' 'nbv0.5scaffold512_636660-640426' '(at2g18950 : 152.0) Encodes homogentisate phytyltransferase involved in tocopherol biosynthesis. Has impact on seed longevity and plays a role in the adaptation to low temperature stress, notably phloem loading.; homogentisate phytyltransferase 1 (HPT1); CONTAINS InterPro DOMAIN/s: UbiA prenyltransferase (InterPro:IPR000537); BEST Arabidopsis thaliana protein match is: homogentisate prenyltransferase (TAIR:AT3G11945.1); Has 1047 Blast hits to 1044 proteins in 315 species: Archae - 194; Bacteria - 477; Metazoa - 7; Fungi - 6; Plants - 190; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (gnl|cdd|84373 : 108.0) no description available & (reliability: 304.0) & (original description: Putative hggt, Description = Homogentisate phytyltransferase, PFAM = PF01040)' T '16.1.3.2' 'secondary metabolism.isoprenoids.tocopherol biosynthesis.homogentisate phytyltransferase' 'niben101scf03979_492820-516437' '(at2g18950 : 471.0) Encodes homogentisate phytyltransferase involved in tocopherol biosynthesis. Has impact on seed longevity and plays a role in the adaptation to low temperature stress, notably phloem loading.; homogentisate phytyltransferase 1 (HPT1); CONTAINS InterPro DOMAIN/s: UbiA prenyltransferase (InterPro:IPR000537); BEST Arabidopsis thaliana protein match is: homogentisate prenyltransferase (TAIR:AT3G11945.1); Has 1047 Blast hits to 1044 proteins in 315 species: Archae - 194; Bacteria - 477; Metazoa - 7; Fungi - 6; Plants - 190; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (gnl|cdd|84373 : 254.0) no description available & (reliability: 942.0) & (original description: Putative hpt, Description = Homogentisate phytyl transferase, PFAM = PF01040)' T '16.1.3.2' 'secondary metabolism.isoprenoids.tocopherol biosynthesis.homogentisate phytyltransferase' 'niben101scf07926_572194-582360' '(at2g18950 : 343.0) Encodes homogentisate phytyltransferase involved in tocopherol biosynthesis. Has impact on seed longevity and plays a role in the adaptation to low temperature stress, notably phloem loading.; homogentisate phytyltransferase 1 (HPT1); CONTAINS InterPro DOMAIN/s: UbiA prenyltransferase (InterPro:IPR000537); BEST Arabidopsis thaliana protein match is: homogentisate prenyltransferase (TAIR:AT3G11945.1); Has 1047 Blast hits to 1044 proteins in 315 species: Archae - 194; Bacteria - 477; Metazoa - 7; Fungi - 6; Plants - 190; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (gnl|cdd|84373 : 218.0) no description available & (reliability: 686.0) & (original description: Putative hggt, Description = Homogentisate geranylgeranyl transferase, PFAM = PF01040)' T '16.1.3.3' 'secondary metabolism.isoprenoids.tocopherol biosynthesis.MPBQ/MSBQ methyltransferase' 'nbv0.3scaffold54015_7197-12868' '(p23525|in37_spiol : 499.0) 37 kDa inner envelope membrane protein, chloroplast precursor (E37) - Spinacia oleracea (Spinach) & (at3g63410 : 471.0) Encodes a MPBQ/MSBQ methyltransferase located in the chloroplast inner envelope membrane. Mutant plants lack plastoquinone (PQ), suggesting that the APG1 protein is involved in the methylation step of PQ biosynthesis. The gene product is also involved in tocopherol (vitamin E) biosynthesis.; ALBINO OR PALE GREEN MUTANT 1 (APG1); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity; INVOLVED IN: plastoquinone biosynthetic process, vitamin E biosynthetic process; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); Has 7919 Blast hits to 7917 proteins in 1885 species: Archae - 394; Bacteria - 5939; Metazoa - 115; Fungi - 139; Plants - 226; Viruses - 0; Other Eukaryotes - 1106 (source: NCBI BLink). & (gnl|cdd|36753 : 231.0) no description available & (gnl|cdd|32408 : 98.8) no description available & (reliability: 942.0) & (original description: Putative hmp, Description = MPBQ/MSBQ methyltransferase, PFAM = PF08241)' T '16.1.3.3' 'secondary metabolism.isoprenoids.tocopherol biosynthesis.MPBQ/MSBQ methyltransferase' 'niben101scf03573_127532-132712' '(p23525|in37_spiol : 503.0) 37 kDa inner envelope membrane protein, chloroplast precursor (E37) - Spinacia oleracea (Spinach) & (at3g63410 : 485.0) Encodes a MPBQ/MSBQ methyltransferase located in the chloroplast inner envelope membrane. Mutant plants lack plastoquinone (PQ), suggesting that the APG1 protein is involved in the methylation step of PQ biosynthesis. The gene product is also involved in tocopherol (vitamin E) biosynthesis.; ALBINO OR PALE GREEN MUTANT 1 (APG1); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity; INVOLVED IN: plastoquinone biosynthetic process, vitamin E biosynthetic process; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); Has 7919 Blast hits to 7917 proteins in 1885 species: Archae - 394; Bacteria - 5939; Metazoa - 115; Fungi - 139; Plants - 226; Viruses - 0; Other Eukaryotes - 1106 (source: NCBI BLink). & (gnl|cdd|36753 : 233.0) no description available & (gnl|cdd|32408 : 93.4) no description available & (reliability: 970.0) & (original description: Putative hmp, Description = MPBQ/MSBQ methyltransferase, PFAM = PF13649)' T '16.1.3.3' 'secondary metabolism.isoprenoids.tocopherol biosynthesis.MPBQ/MSBQ methyltransferase' 'niben101scf10450_8060-13672' '(p23525|in37_spiol : 497.0) 37 kDa inner envelope membrane protein, chloroplast precursor (E37) - Spinacia oleracea (Spinach) & (at3g63410 : 488.0) Encodes a MPBQ/MSBQ methyltransferase located in the chloroplast inner envelope membrane. Mutant plants lack plastoquinone (PQ), suggesting that the APG1 protein is involved in the methylation step of PQ biosynthesis. The gene product is also involved in tocopherol (vitamin E) biosynthesis.; ALBINO OR PALE GREEN MUTANT 1 (APG1); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity; INVOLVED IN: plastoquinone biosynthetic process, vitamin E biosynthetic process; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); Has 7919 Blast hits to 7917 proteins in 1885 species: Archae - 394; Bacteria - 5939; Metazoa - 115; Fungi - 139; Plants - 226; Viruses - 0; Other Eukaryotes - 1106 (source: NCBI BLink). & (gnl|cdd|36753 : 233.0) no description available & (gnl|cdd|32408 : 95.0) no description available & (reliability: 976.0) & (original description: Putative VTE3, Description = 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic, PFAM = PF13649)' T '16.1.3.3' 'secondary metabolism.isoprenoids.tocopherol biosynthesis.MPBQ/MSBQ methyltransferase' 'niben101scf16915_56395-60820' '(p23525|in37_spiol : 502.0) 37 kDa inner envelope membrane protein, chloroplast precursor (E37) - Spinacia oleracea (Spinach) & (at3g63410 : 473.0) Encodes a MPBQ/MSBQ methyltransferase located in the chloroplast inner envelope membrane. Mutant plants lack plastoquinone (PQ), suggesting that the APG1 protein is involved in the methylation step of PQ biosynthesis. The gene product is also involved in tocopherol (vitamin E) biosynthesis.; ALBINO OR PALE GREEN MUTANT 1 (APG1); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity; INVOLVED IN: plastoquinone biosynthetic process, vitamin E biosynthetic process; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); Has 7919 Blast hits to 7917 proteins in 1885 species: Archae - 394; Bacteria - 5939; Metazoa - 115; Fungi - 139; Plants - 226; Viruses - 0; Other Eukaryotes - 1106 (source: NCBI BLink). & (gnl|cdd|36753 : 232.0) no description available & (gnl|cdd|32408 : 99.6) no description available & (reliability: 946.0) & (original description: Putative hmp, Description = MPBQ/MSBQ methyltransferase, PFAM = PF08241)' T '16.1.3.4' 'secondary metabolism.isoprenoids.tocopherol biosynthesis.tocopherol cyclase' 'niben101scf10086_204631-213320' '(at4g32770 : 653.0) Tocopherol cyclase involved in tocopherol (vitamin E)synthesis. VTE1 over-expressing plants have increased tocopherol indicating VTE1 is a major limiting factor in tocopherol synthesis. Mutants defective in this gene accumulate high amounts of zeaxanthin in conditions of high light or low temperature. Plays a role in the adaptation to low temperature stress, notably phloem loading.; VITAMIN E DEFICIENT 1 (VTE1); FUNCTIONS IN: tocopherol cyclase activity; INVOLVED IN: in 9 processes; LOCATED IN: chloroplast, plastoglobule, chloroplast inner membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q94fy8|tocc_maize : 627.0) Probable tocopherol cyclase, chloroplast precursor (Sucrose export defective 1) - Zea mays (Maize) & (reliability: 1306.0) & (original description: Putative tc, Description = Tocopherol cyclase, PFAM = PF14249)' T '16.1.3.5' 'secondary metabolism.isoprenoids.tocopherol biosynthesis.tocopherol methyltransferase' 'niben044scf00045482ctg005_138-2608' '(at1g64970 : 100.0) gamma-tocopherol methyltransferase (g-TMT) mRNA, nuclear; mutant has Deficient in alpha and beta tocopherol; Accumulates gamma tocopherol in leaves; gamma-tocopherol methyltransferase (G-TMT); CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G73600.1); Has 14618 Blast hits to 14609 proteins in 2288 species: Archae - 408; Bacteria - 10917; Metazoa - 203; Fungi - 466; Plants - 497; Viruses - 0; Other Eukaryotes - 2127 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative TMT, Description = Gamma-tocopherol methyltransferase, PFAM = )' T '16.1.3.5' 'secondary metabolism.isoprenoids.tocopherol biosynthesis.tocopherol methyltransferase' 'niben101scf02821_430439-437122' '(at1g64970 : 410.0) gamma-tocopherol methyltransferase (g-TMT) mRNA, nuclear; mutant has Deficient in alpha and beta tocopherol; Accumulates gamma tocopherol in leaves; gamma-tocopherol methyltransferase (G-TMT); CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G73600.1); Has 14618 Blast hits to 14609 proteins in 2288 species: Archae - 408; Bacteria - 10917; Metazoa - 203; Fungi - 466; Plants - 497; Viruses - 0; Other Eukaryotes - 2127 (source: NCBI BLink). & (gnl|cdd|36483 : 183.0) no description available & (gnl|cdd|87468 : 96.9) no description available & (reliability: 820.0) & (original description: Putative VTE4, Description = Tocopherol O-methyltransferase, chloroplastic, PFAM = PF08241)' T '16.1.3.1001' 'secondary metabolism.isoprenoids.tocopherol biosynthesis' 'delta-tocopherol' 'secondary metabolism, tocopherols' M '16.1.3.1002' 'secondary metabolism.isoprenoids.tocopherol biosynthesis' 'tocopherol acetate' 'secondary metabolism, tocopherols' M '16.1.3.1003' 'secondary metabolism.isoprenoids.tocopherol biosynthesis' 'alpha-tocopherol' 'secondary metabolism, tocopherols' M '16.1.3.1004' 'secondary metabolism.isoprenoids.tocopherol biosynthesis' 'beta-tocopherol' 'secondary metabolism, tocopherols' M '16.1.3.1005' 'secondary metabolism.isoprenoids.tocopherol biosynthesis' 'gamma-tocopherol' 'secondary metabolism, tocopherols' M '16.1.4' 'secondary metabolism.isoprenoids.carotenoids' 'nbv0.3scaffold158507_1-911' '(at5g49555 : 219.0) FAD/NAD(P)-binding oxidoreductase family protein; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076); BEST Arabidopsis thaliana protein match is: carotenoid isomerase (TAIR:AT1G06820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39455 : 174.0) no description available & (gnl|cdd|31426 : 101.0) no description available & (reliability: 438.0) & (original description: Putative crtI, Description = FAD-dependent oxidoreductase, PFAM = PF13450)' T '16.1.4' 'secondary metabolism.isoprenoids.carotenoids' 'nbv0.5scaffold2210_15040-18494' '(at3g09580 : 470.0) FAD/NAD(P)-binding oxidoreductase family protein; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2908 Blast hits to 2906 proteins in 704 species: Archae - 36; Bacteria - 1433; Metazoa - 261; Fungi - 51; Plants - 352; Viruses - 0; Other Eukaryotes - 775 (source: NCBI BLink). & (gnl|cdd|85554 : 126.0) no description available & (reliability: 940.0) & (original description: Putative puo, Description = Amine oxidase, PFAM = PF01593)' T '16.1.4' 'secondary metabolism.isoprenoids.carotenoids' 'niben101scf05969_136781-151573' '(at5g49555 : 902.0) FAD/NAD(P)-binding oxidoreductase family protein; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076); BEST Arabidopsis thaliana protein match is: carotenoid isomerase (TAIR:AT1G06820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39455 : 653.0) no description available & (gnl|cdd|31426 : 297.0) no description available & (reliability: 1804.0) & (original description: Putative crtI, Description = FAD-dependent oxidoreductase, PFAM = PF01593)' T '16.1.4' 'secondary metabolism.isoprenoids.carotenoids' 'niben101scf07508_873620-882058' '(at1g57770 : 870.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: carotenoid isomerase (TAIR:AT1G06820.1); Has 6263 Blast hits to 6155 proteins in 967 species: Archae - 159; Bacteria - 2901; Metazoa - 394; Fungi - 76; Plants - 350; Viruses - 0; Other Eukaryotes - 2383 (source: NCBI BLink). & (gnl|cdd|39455 : 535.0) no description available & (gnl|cdd|31426 : 224.0) no description available & (q2vex9|crtso_dauca : 184.0) Carotenoid isomerase, chloroplast precursor (EC 5.-.-.-) (CrtISO) - Daucus carota (Carrot) & (reliability: 1740.0) & (original description: Putative crtH, Description = Carotenoid isomerase, PFAM = PF01593)' T '16.1.4' 'secondary metabolism.isoprenoids.carotenoids' 'niben101scf11560_17657-21111' '(at3g09580 : 486.0) FAD/NAD(P)-binding oxidoreductase family protein; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2908 Blast hits to 2906 proteins in 704 species: Archae - 36; Bacteria - 1433; Metazoa - 261; Fungi - 51; Plants - 352; Viruses - 0; Other Eukaryotes - 775 (source: NCBI BLink). & (gnl|cdd|85554 : 140.0) no description available & (reliability: 972.0) & (original description: Putative puo, Description = Putrescine oxidase, PFAM = PF01593)' T '16.1.4.1' 'secondary metabolism.isoprenoids.carotenoids.phytoene synthase' 'niben101scf04020_35096-40455' '(p37272|psy_capan : 729.0) Phytoene synthase, chloroplast precursor (EC 2.5.1.-) - Capsicum annuum (Bell pepper) & (at5g17230 : 586.0) Encodes phytoene synthase.; PHYTOENE SYNTHASE (PSY); CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site (InterPro:IPR019845), Terpenoid synthase (InterPro:IPR008949), Squalene/phytoene synthase (InterPro:IPR002060); Has 5365 Blast hits to 5364 proteins in 1001 species: Archae - 81; Bacteria - 2469; Metazoa - 28; Fungi - 64; Plants - 1002; Viruses - 0; Other Eukaryotes - 1721 (source: NCBI BLink). & (gnl|cdd|36672 : 343.0) no description available & (gnl|cdd|64362 : 334.0) no description available & (reliability: 1172.0) & (original description: Putative PSY1, Description = Bifunctional 15-cis-phytoene synthase, chromoplastic, PFAM = PF00494)' T '16.1.4.1' 'secondary metabolism.isoprenoids.carotenoids.phytoene synthase' 'niben101scf07253_120609-125329' '(p37272|psy_capan : 673.0) Phytoene synthase, chloroplast precursor (EC 2.5.1.-) - Capsicum annuum (Bell pepper) & (at5g17230 : 560.0) Encodes phytoene synthase.; PHYTOENE SYNTHASE (PSY); CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site (InterPro:IPR019845), Terpenoid synthase (InterPro:IPR008949), Squalene/phytoene synthase (InterPro:IPR002060); Has 5365 Blast hits to 5364 proteins in 1001 species: Archae - 81; Bacteria - 2469; Metazoa - 28; Fungi - 64; Plants - 1002; Viruses - 0; Other Eukaryotes - 1721 (source: NCBI BLink). & (gnl|cdd|36672 : 344.0) no description available & (gnl|cdd|64362 : 332.0) no description available & (reliability: 1120.0) & (original description: Putative psy2, Description = Phytoene synthase 2, PFAM = PF00494)' T '16.1.4.1' 'secondary metabolism.isoprenoids.carotenoids.phytoene synthase' 'niben101scf08679_530138-538112' '(p37272|psy_capan : 451.0) Phytoene synthase, chloroplast precursor (EC 2.5.1.-) - Capsicum annuum (Bell pepper) & (at5g17230 : 442.0) Encodes phytoene synthase.; PHYTOENE SYNTHASE (PSY); CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site (InterPro:IPR019845), Terpenoid synthase (InterPro:IPR008949), Squalene/phytoene synthase (InterPro:IPR002060); Has 5365 Blast hits to 5364 proteins in 1001 species: Archae - 81; Bacteria - 2469; Metazoa - 28; Fungi - 64; Plants - 1002; Viruses - 0; Other Eukaryotes - 1721 (source: NCBI BLink). & (gnl|cdd|64362 : 291.0) no description available & (gnl|cdd|36672 : 250.0) no description available & (reliability: 884.0) & (original description: Putative psy, Description = Phytoene synthase, PFAM = PF00494)' T '16.1.4.2' 'secondary metabolism.isoprenoids.carotenoids.phytoene dehydrogenase' 'nbv0.5scaffold3010_147014-149994' '(p80093|crti_capan : 271.0) Phytoene dehydrogenase, chloroplast precursor (EC 1.14.99.-) (Phytoene desaturase) - Capsicum annuum (Bell pepper) & (at4g14210 : 251.0) Encodes phytoene desaturase (phytoene dehydrogenase), an enzyme that catalyzes the desaturation of phytoene to zeta-carotene during carotenoid biosynthesis. Processed protein is localized to the plastid.; phytoene desaturase 3 (PDS3); FUNCTIONS IN: phytoene dehydrogenase activity; INVOLVED IN: carotenoid biosynthetic process, carotene biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Phytoene desaturase (InterPro:IPR014102); BEST Arabidopsis thaliana protein match is: zeta-carotene desaturase (TAIR:AT3G04870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33157 : 121.0) no description available & (gnl|cdd|35252 : 108.0) no description available & (reliability: 502.0) & (original description: Putative PDS, Description = Phytoene desaturase, PFAM = PF01593)' T '16.1.4.2' 'secondary metabolism.isoprenoids.carotenoids.phytoene dehydrogenase' 'niben101scf01283_197006-206021' '(p80093|crti_capan : 1134.0) Phytoene dehydrogenase, chloroplast precursor (EC 1.14.99.-) (Phytoene desaturase) - Capsicum annuum (Bell pepper) & (at4g14210 : 952.0) Encodes phytoene desaturase (phytoene dehydrogenase), an enzyme that catalyzes the desaturation of phytoene to zeta-carotene during carotenoid biosynthesis. Processed protein is localized to the plastid.; phytoene desaturase 3 (PDS3); FUNCTIONS IN: phytoene dehydrogenase activity; INVOLVED IN: carotenoid biosynthetic process, carotene biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Phytoene desaturase (InterPro:IPR014102); BEST Arabidopsis thaliana protein match is: zeta-carotene desaturase (TAIR:AT3G04870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33157 : 412.0) no description available & (gnl|cdd|35252 : 304.0) no description available & (reliability: 1904.0) & (original description: Putative PDS, Description = 15-cis-phytoene desaturase, chloroplastic/chromoplastic, PFAM = PF01593)' T '16.1.4.2' 'secondary metabolism.isoprenoids.carotenoids.phytoene dehydrogenase' 'niben101scf14708_12814-22332' '(p80093|crti_capan : 1137.0) Phytoene dehydrogenase, chloroplast precursor (EC 1.14.99.-) (Phytoene desaturase) - Capsicum annuum (Bell pepper) & (at4g14210 : 942.0) Encodes phytoene desaturase (phytoene dehydrogenase), an enzyme that catalyzes the desaturation of phytoene to zeta-carotene during carotenoid biosynthesis. Processed protein is localized to the plastid.; phytoene desaturase 3 (PDS3); FUNCTIONS IN: phytoene dehydrogenase activity; INVOLVED IN: carotenoid biosynthetic process, carotene biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Phytoene desaturase (InterPro:IPR014102); BEST Arabidopsis thaliana protein match is: zeta-carotene desaturase (TAIR:AT3G04870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33157 : 414.0) no description available & (gnl|cdd|35252 : 308.0) no description available & (reliability: 1884.0) & (original description: Putative PDS, Description = 15-cis-phytoene desaturase, chloroplastic/chromoplastic, PFAM = PF01593)' T '16.1.4.3' 'secondary metabolism.isoprenoids.carotenoids.zeta-carotene desaturase' 'niben101scf02804_31923-39899' '(q9smj3|zds_capan : 1161.0) Zeta-carotene desaturase, chloroplast precursor (EC 1.14.99.30) (Carotene 7,8-desaturase) - Capsicum annuum (Bell pepper) & (at3g04870 : 950.0) Involved in the biosynthesis of carotenes and xanthophylls, reduces zeta-carotene to lycopene.; zeta-carotene desaturase (ZDS); FUNCTIONS IN: carotene 7,8-desaturase activity; INVOLVED IN: carotene biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Adrenodoxin reductase (InterPro:IPR000759), Carotene 7,8-desaturase (InterPro:IPR014103); BEST Arabidopsis thaliana protein match is: phytoene desaturase 3 (TAIR:AT4G14210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33157 : 412.0) no description available & (gnl|cdd|35252 : 268.0) no description available & (reliability: 1900.0) & (original description: Putative ZDS, Description = Zeta-carotene desaturase, chloroplastic/chromoplastic, PFAM = PF01593)' T '16.1.4.4' 'secondary metabolism.isoprenoids.carotenoids.lycopene epsilon cyclase' 'niben101scf18343_154630-161326' '(at5g57030 : 802.0) Lutein-deficient 2 (LUT2) required for lutein biosynthesis, member of the xanthophyll class of carotenoids. Encodes lycopene epsilon cyclase; LUTEIN DEFICIENT 2 (LUT2); CONTAINS InterPro DOMAIN/s: Lycopene beta/epsilon cyclase (InterPro:IPR008671), Lycopene cyclase, beta/epsilon (InterPro:IPR010108); BEST Arabidopsis thaliana protein match is: lycopene cyclase (TAIR:AT3G10230.1); Has 1086 Blast hits to 1081 proteins in 157 species: Archae - 2; Bacteria - 176; Metazoa - 0; Fungi - 0; Plants - 363; Viruses - 0; Other Eukaryotes - 545 (source: NCBI BLink). & (gnl|cdd|69364 : 464.0) no description available & (q43578|lcyb_tobac : 294.0) Lycopene beta cyclase, chloroplast precursor (EC 1.14.-.-) - Nicotiana tabacum (Common tobacco) & (reliability: 1604.0) & (original description: Putative bLCY, Description = Lycopene epsilon-cyclase, PFAM = PF05834)' T '16.1.4.5' 'secondary metabolism.isoprenoids.carotenoids.lycopene beta cyclase' 'nbv0.3scaffold12136_33637-37124' '(q42435|ccs_capan : 860.0) Capsanthin/capsorubin synthase, chloroplast precursor (EC 5.3.99.8) - Capsicum annuum (Bell pepper) & (at3g10230 : 525.0) Encodes a protein with lycopene β-cyclase activity. This enzyme uses the linear, symmetrical lycopene as substrate. However, unlike the ε-cyclase which adds only one ring, the β-cyclase introduces a ring at both ends of lycopene to form the bicyclic β-carotene.; lycopene cyclase (LYC); CONTAINS InterPro DOMAIN/s: Lycopene beta/epsilon cyclase (InterPro:IPR008671), Lycopene cyclase, beta/epsilon (InterPro:IPR010108); BEST Arabidopsis thaliana protein match is: Lycopene beta/epsilon cyclase protein (TAIR:AT5G57030.1); Has 1114 Blast hits to 1109 proteins in 188 species: Archae - 1; Bacteria - 220; Metazoa - 0; Fungi - 0; Plants - 356; Viruses - 0; Other Eukaryotes - 537 (source: NCBI BLink). & (gnl|cdd|69364 : 412.0) no description available & (reliability: 1050.0) & (original description: Putative NXS, Description = Neoxanthin synthase, chloroplastic, PFAM = PF05834)' T '16.1.4.5' 'secondary metabolism.isoprenoids.carotenoids.lycopene beta cyclase' 'niben101scf00980_786184-789733' '(q43578|lcyb_tobac : 979.0) Lycopene beta cyclase, chloroplast precursor (EC 1.14.-.-) - Nicotiana tabacum (Common tobacco) & (at3g10230 : 774.0) Encodes a protein with lycopene β-cyclase activity. This enzyme uses the linear, symmetrical lycopene as substrate. However, unlike the ε-cyclase which adds only one ring, the β-cyclase introduces a ring at both ends of lycopene to form the bicyclic β-carotene.; lycopene cyclase (LYC); CONTAINS InterPro DOMAIN/s: Lycopene beta/epsilon cyclase (InterPro:IPR008671), Lycopene cyclase, beta/epsilon (InterPro:IPR010108); BEST Arabidopsis thaliana protein match is: Lycopene beta/epsilon cyclase protein (TAIR:AT5G57030.1); Has 1114 Blast hits to 1109 proteins in 188 species: Archae - 1; Bacteria - 220; Metazoa - 0; Fungi - 0; Plants - 356; Viruses - 0; Other Eukaryotes - 537 (source: NCBI BLink). & (gnl|cdd|69364 : 420.0) no description available & (reliability: 1548.0) & (original description: Putative LCY1, Description = Lycopene beta cyclase, chloroplastic, PFAM = PF05834)' T '16.1.4.5' 'secondary metabolism.isoprenoids.carotenoids.lycopene beta cyclase' 'niben101scf01750_1471112-1474150' '(q42435|ccs_capan : 849.0) Capsanthin/capsorubin synthase, chloroplast precursor (EC 5.3.99.8) - Capsicum annuum (Bell pepper) & (at3g10230 : 534.0) Encodes a protein with lycopene β-cyclase activity. This enzyme uses the linear, symmetrical lycopene as substrate. However, unlike the ε-cyclase which adds only one ring, the β-cyclase introduces a ring at both ends of lycopene to form the bicyclic β-carotene.; lycopene cyclase (LYC); CONTAINS InterPro DOMAIN/s: Lycopene beta/epsilon cyclase (InterPro:IPR008671), Lycopene cyclase, beta/epsilon (InterPro:IPR010108); BEST Arabidopsis thaliana protein match is: Lycopene beta/epsilon cyclase protein (TAIR:AT5G57030.1); Has 1114 Blast hits to 1109 proteins in 188 species: Archae - 1; Bacteria - 220; Metazoa - 0; Fungi - 0; Plants - 356; Viruses - 0; Other Eukaryotes - 537 (source: NCBI BLink). & (gnl|cdd|69364 : 419.0) no description available & (reliability: 1068.0) & (original description: Putative NXS, Description = Neoxanthin synthase, chloroplastic, PFAM = PF05834)' T '16.1.4.6' 'secondary metabolism.isoprenoids.carotenoids.carotenoid beta ring hydroxylase' 'niben101scf01232_385600-389646' '(at5g52570 : 376.0) Converts β-carotene to zeaxanthin via cryptoxanthin.; beta-carotene hydroxylase 2 (BETA-OHASE 2); FUNCTIONS IN: carotene beta-ring hydroxylase activity; INVOLVED IN: xanthophyll biosynthetic process, carotene metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: beta-hydroxylase 1 (TAIR:AT4G25700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 752.0) & (original description: Putative CA2, Description = Beta-carotene hydroxylase 2, chloroplastic, PFAM = PF04116)' T '16.1.4.6' 'secondary metabolism.isoprenoids.carotenoids.carotenoid beta ring hydroxylase' 'niben101scf01232_385636-388156' '(at5g52570 : 125.0) Converts β-carotene to zeaxanthin via cryptoxanthin.; beta-carotene hydroxylase 2 (BETA-OHASE 2); FUNCTIONS IN: carotene beta-ring hydroxylase activity; INVOLVED IN: xanthophyll biosynthetic process, carotene metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: beta-hydroxylase 1 (TAIR:AT4G25700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative bCHY, Description = Beta-carotene hydroxylase, PFAM = )' T '16.1.4.6' 'secondary metabolism.isoprenoids.carotenoids.carotenoid beta ring hydroxylase' 'niben101scf03114_482781-661128' '(at5g52570 : 355.0) Converts β-carotene to zeaxanthin via cryptoxanthin.; beta-carotene hydroxylase 2 (BETA-OHASE 2); FUNCTIONS IN: carotene beta-ring hydroxylase activity; INVOLVED IN: xanthophyll biosynthetic process, carotene metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: beta-hydroxylase 1 (TAIR:AT4G25700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 710.0) & (original description: Putative CA2, Description = Beta-carotene hydroxylase 2, chloroplastic, PFAM = PF04116)' T '16.1.4.7' 'secondary metabolism.isoprenoids.carotenoids.carotenoid epsilon ring hydroxylase' 'niben044scf00052751ctg000_1149-14490' '(at1g31800 : 909.0) Encodes a protein with β-ring carotenoid hydroxylase activity.; "cytochrome P450, family 97, subfamily A, polypeptide 3" (CYP97A3); FUNCTIONS IN: carotene beta-ring hydroxylase activity, oxygen binding; INVOLVED IN: carotenoid biosynthetic process, xanthophyll biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT3G53130.1); Has 33118 Blast hits to 32966 proteins in 1677 species: Archae - 61; Bacteria - 4341; Metazoa - 11636; Fungi - 7136; Plants - 8575; Viruses - 3; Other Eukaryotes - 1366 (source: NCBI BLink). & (o48921|c97b2_soybn : 439.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|35379 : 309.0) no description available & (gnl|cdd|84486 : 263.0) no description available & (reliability: 1818.0) & (original description: Putative cpr, Description = Cytochrome P450, PFAM = PF00067)' T '16.1.4.7' 'secondary metabolism.isoprenoids.carotenoids.carotenoid epsilon ring hydroxylase' 'niben101scf00177_1119698-1135082' '(at1g31800 : 875.0) Encodes a protein with β-ring carotenoid hydroxylase activity.; "cytochrome P450, family 97, subfamily A, polypeptide 3" (CYP97A3); FUNCTIONS IN: carotene beta-ring hydroxylase activity, oxygen binding; INVOLVED IN: carotenoid biosynthetic process, xanthophyll biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT3G53130.1); Has 33118 Blast hits to 32966 proteins in 1677 species: Archae - 61; Bacteria - 4341; Metazoa - 11636; Fungi - 7136; Plants - 8575; Viruses - 3; Other Eukaryotes - 1366 (source: NCBI BLink). & (o48921|c97b2_soybn : 433.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|35379 : 302.0) no description available & (gnl|cdd|84486 : 255.0) no description available & (reliability: 1750.0) & (original description: Putative cpr, Description = Cytochrome P450, PFAM = PF00067)' T '16.1.4.7' 'secondary metabolism.isoprenoids.carotenoids.carotenoid epsilon ring hydroxylase' 'niben101scf02502_1147154-1158611' '(at3g53130 : 862.0) Lutein-deficient 1 (LUT1) required for lutein biosynthesis, member of the xanthophyll class of carotenoids. Involved in epsilon ring hydroxylation. Maps at 67.3 cM on chromosome 3.; LUTEIN DEFICIENT 1 (LUT1); FUNCTIONS IN: epsilon hydroxylase activity, oxygen binding; INVOLVED IN: carotenoid biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 97, subfamily A, polypeptide 3 (TAIR:AT1G31800.1); Has 31038 Blast hits to 30928 proteins in 1581 species: Archae - 62; Bacteria - 3557; Metazoa - 11361; Fungi - 6359; Plants - 8451; Viruses - 3; Other Eukaryotes - 1245 (source: NCBI BLink). & (o48921|c97b2_soybn : 440.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|35379 : 299.0) no description available & (gnl|cdd|84486 : 257.0) no description available & (reliability: 1724.0) & (original description: Putative lut1, Description = Carotene epsilon-monooxygenase, PFAM = PF00067)' T '16.1.4.8' 'secondary metabolism.isoprenoids.carotenoids.carotenoid isomerase' 'niben101scf12589_41826-50171' '(at1g06820 : 907.0) Encodes carotenoid isomerase. Catalyzes the isomerization of poly-cis-carotenoids to all-trans-carotenoids. Together with PDS and ZDS, CRTiso is required to complete the synthesis of lycopene from phytoene.; carotenoid isomerase (CRTISO); CONTAINS InterPro DOMAIN/s: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953), Carotene isomerase (InterPro:IPR014101); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT1G57770.1); Has 6522 Blast hits to 6439 proteins in 939 species: Archae - 207; Bacteria - 2788; Metazoa - 150; Fungi - 77; Plants - 203; Viruses - 0; Other Eukaryotes - 3097 (source: NCBI BLink). & (q2vex9|crtso_dauca : 907.0) Carotenoid isomerase, chloroplast precursor (EC 5.-.-.-) (CrtISO) - Daucus carota (Carrot) & (gnl|cdd|39455 : 529.0) no description available & (gnl|cdd|31426 : 274.0) no description available & (reliability: 1814.0) & (original description: Putative CRTISO, Description = Prolycopene isomerase, chloroplastic, PFAM = PF01593)' T '16.1.4.10' 'secondary metabolism.isoprenoids.carotenoids.carotenoid cleavage dioxygenase' 'nbv0.5scaffold906_177691-184593' '(gnl|cdd|33468 : 133.0) no description available & (at3g63520 : 112.0) Encodes a protein with 9-cis-epoxycarotenoid dioxygenase activity. The enzyme was shown to act on a variety of carotenoid including β-carotene, lutein, zeaxanthin, and all-trans-violaxanthin. When those compounds are used as substrates, the major reaction product detected is a C14 dialdehyde: 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial. The enzyme did not cleave as efficiently carotenoids containing 9-cis-double or allenic bonds.; carotenoid cleavage dioxygenase 1 (CCD1); FUNCTIONS IN: 9-cis-epoxycarotenoid dioxygenase activity; INVOLVED IN: response to water deprivation, carotene catabolic process, xanthophyll catabolic process, carotenoid catabolic process; LOCATED IN: plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 4 (TAIR:AT4G19170.1); Has 2926 Blast hits to 2896 proteins in 500 species: Archae - 16; Bacteria - 808; Metazoa - 317; Fungi - 194; Plants - 866; Viruses - 0; Other Eukaryotes - 725 (source: NCBI BLink). & (gnl|cdd|36499 : 83.1) no description available & (reliability: 224.0) & (original description: Putative Sb02g021480, Description = Putative uncharacterized protein Sb02g021480, PFAM = PF03055;PF03055)' T '16.1.4.10' 'secondary metabolism.isoprenoids.carotenoids.carotenoid cleavage dioxygenase' 'niben044scf00023796ctg004_6148-10593' '(gnl|cdd|33468 : 208.0) no description available & (at3g63520 : 144.0) Encodes a protein with 9-cis-epoxycarotenoid dioxygenase activity. The enzyme was shown to act on a variety of carotenoid including β-carotene, lutein, zeaxanthin, and all-trans-violaxanthin. When those compounds are used as substrates, the major reaction product detected is a C14 dialdehyde: 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial. The enzyme did not cleave as efficiently carotenoids containing 9-cis-double or allenic bonds.; carotenoid cleavage dioxygenase 1 (CCD1); FUNCTIONS IN: 9-cis-epoxycarotenoid dioxygenase activity; INVOLVED IN: response to water deprivation, carotene catabolic process, xanthophyll catabolic process, carotenoid catabolic process; LOCATED IN: plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 4 (TAIR:AT4G19170.1); Has 2926 Blast hits to 2896 proteins in 500 species: Archae - 16; Bacteria - 808; Metazoa - 317; Fungi - 194; Plants - 866; Viruses - 0; Other Eukaryotes - 725 (source: NCBI BLink). & (gnl|cdd|36499 : 90.8) no description available & (reliability: 288.0) & (original description: Putative Sb02g021490, Description = Putative uncharacterized protein Sb02g021490, PFAM = PF03055;PF03055)' T '16.1.4.10' 'secondary metabolism.isoprenoids.carotenoids.carotenoid cleavage dioxygenase' 'niben101scf09445_397019-402297' '(gnl|cdd|86222 : 284.0) no description available & (at3g63520 : 194.0) Encodes a protein with 9-cis-epoxycarotenoid dioxygenase activity. The enzyme was shown to act on a variety of carotenoid including β-carotene, lutein, zeaxanthin, and all-trans-violaxanthin. When those compounds are used as substrates, the major reaction product detected is a C14 dialdehyde: 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial. The enzyme did not cleave as efficiently carotenoids containing 9-cis-double or allenic bonds.; carotenoid cleavage dioxygenase 1 (CCD1); FUNCTIONS IN: 9-cis-epoxycarotenoid dioxygenase activity; INVOLVED IN: response to water deprivation, carotene catabolic process, xanthophyll catabolic process, carotenoid catabolic process; LOCATED IN: plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 4 (TAIR:AT4G19170.1); Has 2926 Blast hits to 2896 proteins in 500 species: Archae - 16; Bacteria - 808; Metazoa - 317; Fungi - 194; Plants - 866; Viruses - 0; Other Eukaryotes - 725 (source: NCBI BLink). & (gnl|cdd|36499 : 126.0) no description available & (reliability: 388.0) & (original description: Putative Os09g0321200, Description = Os09g0321200 protein, PFAM = PF03055)' T '16.1.4.10' 'secondary metabolism.isoprenoids.carotenoids.carotenoid cleavage dioxygenase' 'niben101scf10058_40989-58885' '(at3g63520 : 840.0) Encodes a protein with 9-cis-epoxycarotenoid dioxygenase activity. The enzyme was shown to act on a variety of carotenoid including β-carotene, lutein, zeaxanthin, and all-trans-violaxanthin. When those compounds are used as substrates, the major reaction product detected is a C14 dialdehyde: 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial. The enzyme did not cleave as efficiently carotenoids containing 9-cis-double or allenic bonds.; carotenoid cleavage dioxygenase 1 (CCD1); FUNCTIONS IN: 9-cis-epoxycarotenoid dioxygenase activity; INVOLVED IN: response to water deprivation, carotene catabolic process, xanthophyll catabolic process, carotenoid catabolic process; LOCATED IN: plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 4 (TAIR:AT4G19170.1); Has 2926 Blast hits to 2896 proteins in 500 species: Archae - 16; Bacteria - 808; Metazoa - 317; Fungi - 194; Plants - 866; Viruses - 0; Other Eukaryotes - 725 (source: NCBI BLink). & (gnl|cdd|86222 : 542.0) no description available & (gnl|cdd|36499 : 397.0) no description available & (reliability: 1680.0) & (original description: Putative cco, Description = Carotenoid cleavage oxygenase, PFAM = PF03055)' T '16.1.4.10' 'secondary metabolism.isoprenoids.carotenoids.carotenoid cleavage dioxygenase' 'niben101scf10058_42832-58966' '(at3g63520 : 831.0) Encodes a protein with 9-cis-epoxycarotenoid dioxygenase activity. The enzyme was shown to act on a variety of carotenoid including β-carotene, lutein, zeaxanthin, and all-trans-violaxanthin. When those compounds are used as substrates, the major reaction product detected is a C14 dialdehyde: 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial. The enzyme did not cleave as efficiently carotenoids containing 9-cis-double or allenic bonds.; carotenoid cleavage dioxygenase 1 (CCD1); FUNCTIONS IN: 9-cis-epoxycarotenoid dioxygenase activity; INVOLVED IN: response to water deprivation, carotene catabolic process, xanthophyll catabolic process, carotenoid catabolic process; LOCATED IN: plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 4 (TAIR:AT4G19170.1); Has 2926 Blast hits to 2896 proteins in 500 species: Archae - 16; Bacteria - 808; Metazoa - 317; Fungi - 194; Plants - 866; Viruses - 0; Other Eukaryotes - 725 (source: NCBI BLink). & (gnl|cdd|86222 : 533.0) no description available & (gnl|cdd|36499 : 384.0) no description available & (reliability: 1662.0) & (original description: Putative cco, Description = Carotenoid cleavage oxygenase, PFAM = PF03055)' T '16.1.4.10' 'secondary metabolism.isoprenoids.carotenoids.carotenoid cleavage dioxygenase' 'niben101scf10058_58886-73628' '(at3g63520 : 885.0) Encodes a protein with 9-cis-epoxycarotenoid dioxygenase activity. The enzyme was shown to act on a variety of carotenoid including β-carotene, lutein, zeaxanthin, and all-trans-violaxanthin. When those compounds are used as substrates, the major reaction product detected is a C14 dialdehyde: 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial. The enzyme did not cleave as efficiently carotenoids containing 9-cis-double or allenic bonds.; carotenoid cleavage dioxygenase 1 (CCD1); FUNCTIONS IN: 9-cis-epoxycarotenoid dioxygenase activity; INVOLVED IN: response to water deprivation, carotene catabolic process, xanthophyll catabolic process, carotenoid catabolic process; LOCATED IN: plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 4 (TAIR:AT4G19170.1); Has 2926 Blast hits to 2896 proteins in 500 species: Archae - 16; Bacteria - 808; Metazoa - 317; Fungi - 194; Plants - 866; Viruses - 0; Other Eukaryotes - 725 (source: NCBI BLink). & (gnl|cdd|86222 : 574.0) no description available & (gnl|cdd|36499 : 413.0) no description available & (reliability: 1770.0) & (original description: Putative cco, Description = Carotenoid cleavage oxygenase, PFAM = PF03055)' T '16.1.4.21' 'secondary metabolism.isoprenoids.carotenoids.violaxanthin de-epoxidase' 'nbv0.3scaffold5614_1528-6367' '(at1g08550 : 549.0) Violaxanthin deepoxidase involved in xanthophyll cycle.Two major consequences of the npq1 mutation are the absence of zeaxanthin formation in strong light and the partial inhibition of the quenching of singlet excited chlorophylls in the photosystem II light-harvesting complex; non-photochemical quenching 1 (NPQ1); FUNCTIONS IN: violaxanthin de-epoxidase activity; INVOLVED IN: fatty acid metabolic process, response to heat, chlorophyll metabolic process, xanthophyll metabolic process, xanthophyll cycle; LOCATED IN: chloroplast thylakoid lumen, chloroplast photosystem II, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipocalin conserved site (InterPro:IPR022272), Calycin (InterPro:IPR012674), Violaxanthin de-epoxidase (InterPro:IPR010788), Calycin-like (InterPro:IPR011038); BEST Arabidopsis thaliana protein match is: violaxanthin de-epoxidase-related (TAIR:AT2G21860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70594 : 386.0) no description available & (reliability: 1098.0) & (original description: Putative VDE1, Description = Violaxanthin de-epoxidase, chloroplastic, PFAM = PF07137)' T '16.1.4.21' 'secondary metabolism.isoprenoids.carotenoids.violaxanthin de-epoxidase' 'nbv0.5scaffold46_756597-762181' '(at1g08550 : 464.0) Violaxanthin deepoxidase involved in xanthophyll cycle.Two major consequences of the npq1 mutation are the absence of zeaxanthin formation in strong light and the partial inhibition of the quenching of singlet excited chlorophylls in the photosystem II light-harvesting complex; non-photochemical quenching 1 (NPQ1); FUNCTIONS IN: violaxanthin de-epoxidase activity; INVOLVED IN: fatty acid metabolic process, response to heat, chlorophyll metabolic process, xanthophyll metabolic process, xanthophyll cycle; LOCATED IN: chloroplast thylakoid lumen, chloroplast photosystem II, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipocalin conserved site (InterPro:IPR022272), Calycin (InterPro:IPR012674), Violaxanthin de-epoxidase (InterPro:IPR010788), Calycin-like (InterPro:IPR011038); BEST Arabidopsis thaliana protein match is: violaxanthin de-epoxidase-related (TAIR:AT2G21860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70594 : 325.0) no description available & (reliability: 928.0) & (original description: Putative vde, Description = Violaxanthin de-epoxidase, PFAM = PF07137)' T '16.1.4.21' 'secondary metabolism.isoprenoids.carotenoids.violaxanthin de-epoxidase' 'niben044scf00013338ctg009_1607-7364' '(at1g08550 : 547.0) Violaxanthin deepoxidase involved in xanthophyll cycle.Two major consequences of the npq1 mutation are the absence of zeaxanthin formation in strong light and the partial inhibition of the quenching of singlet excited chlorophylls in the photosystem II light-harvesting complex; non-photochemical quenching 1 (NPQ1); FUNCTIONS IN: violaxanthin de-epoxidase activity; INVOLVED IN: fatty acid metabolic process, response to heat, chlorophyll metabolic process, xanthophyll metabolic process, xanthophyll cycle; LOCATED IN: chloroplast thylakoid lumen, chloroplast photosystem II, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipocalin conserved site (InterPro:IPR022272), Calycin (InterPro:IPR012674), Violaxanthin de-epoxidase (InterPro:IPR010788), Calycin-like (InterPro:IPR011038); BEST Arabidopsis thaliana protein match is: violaxanthin de-epoxidase-related (TAIR:AT2G21860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70594 : 375.0) no description available & (reliability: 1094.0) & (original description: Putative VDE1, Description = Violaxanthin de-epoxidase, chloroplastic, PFAM = PF07137)' T '16.1.4.21' 'secondary metabolism.isoprenoids.carotenoids.violaxanthin de-epoxidase' 'niben101scf00177_735955-741666' '(at1g08550 : 398.0) Violaxanthin deepoxidase involved in xanthophyll cycle.Two major consequences of the npq1 mutation are the absence of zeaxanthin formation in strong light and the partial inhibition of the quenching of singlet excited chlorophylls in the photosystem II light-harvesting complex; non-photochemical quenching 1 (NPQ1); FUNCTIONS IN: violaxanthin de-epoxidase activity; INVOLVED IN: fatty acid metabolic process, response to heat, chlorophyll metabolic process, xanthophyll metabolic process, xanthophyll cycle; LOCATED IN: chloroplast thylakoid lumen, chloroplast photosystem II, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipocalin conserved site (InterPro:IPR022272), Calycin (InterPro:IPR012674), Violaxanthin de-epoxidase (InterPro:IPR010788), Calycin-like (InterPro:IPR011038); BEST Arabidopsis thaliana protein match is: violaxanthin de-epoxidase-related (TAIR:AT2G21860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70594 : 183.0) no description available & (reliability: 796.0) & (original description: Putative VDE1, Description = Violaxanthin de-epoxidase, chloroplastic, PFAM = PF07137)' T '16.1.4.21' 'secondary metabolism.isoprenoids.carotenoids.violaxanthin de-epoxidase' 'niben101scf01006_517300-523453' '(at2g21860 : 667.0) violaxanthin de-epoxidase-related; BEST Arabidopsis thaliana protein match is: non-photochemical quenching 1 (TAIR:AT1G08550.2); Has 151 Blast hits to 151 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 126; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 1334.0) & (original description: Putative At2g21860, Description = At2g21860/F7D8.18, PFAM = )' T '16.1.4.21' 'secondary metabolism.isoprenoids.carotenoids.violaxanthin de-epoxidase' 'niben101scf07893_170216-174376' '(at1g08550 : 578.0) Violaxanthin deepoxidase involved in xanthophyll cycle.Two major consequences of the npq1 mutation are the absence of zeaxanthin formation in strong light and the partial inhibition of the quenching of singlet excited chlorophylls in the photosystem II light-harvesting complex; non-photochemical quenching 1 (NPQ1); FUNCTIONS IN: violaxanthin de-epoxidase activity; INVOLVED IN: fatty acid metabolic process, response to heat, chlorophyll metabolic process, xanthophyll metabolic process, xanthophyll cycle; LOCATED IN: chloroplast thylakoid lumen, chloroplast photosystem II, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipocalin conserved site (InterPro:IPR022272), Calycin (InterPro:IPR012674), Violaxanthin de-epoxidase (InterPro:IPR010788), Calycin-like (InterPro:IPR011038); BEST Arabidopsis thaliana protein match is: violaxanthin de-epoxidase-related (TAIR:AT2G21860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70594 : 414.0) no description available & (reliability: 1156.0) & (original description: Putative VDE1, Description = Violaxanthin de-epoxidase, chloroplastic, PFAM = PF07137)' T '16.1.4.1001' 'secondary metabolism.isoprenoids.carotenoids.phytoene' 'phytoene' 'Carotene precursor' M '16.1.4.1002' 'secondary metabolism.isoprenoids.carotenoids.zeta carotene' 'zeta carotene' '' M '16.1.4.1003' 'secondary metabolism.isoprenoids.carotenoids.lycopene' 'lycopene' '' M '16.1.4.1004' 'secondary metabolism.isoprenoids.carotenoids.alpha carotene' 'alpha carotene' '' M '16.1.4.1005' 'secondary metabolism.isoprenoids.carotenoids.beta carotene' 'alpha carotene' '' M '16.1.4.1006' 'secondary metabolism.isoprenoids.carotenoids.delta carotene' 'delta carotene' '' M '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'nbv0.3scaffold16576_14732-23813' '(gnl|cdd|35718 : 1128.0) no description available & (at1g78950 : 1012.0) Terpenoid cyclases family protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Squalene cyclase (InterPro:IPR018333), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: camelliol C synthase 1 (TAIR:AT1G78955.1); Has 2107 Blast hits to 2005 proteins in 574 species: Archae - 6; Bacteria - 886; Metazoa - 160; Fungi - 240; Plants - 609; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|29791 : 647.0) no description available & (reliability: 2024.0) & (original description: Putative TTS1, Description = Beta-amyrin synthase, PFAM = PF13249;PF13243)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'nbv0.3scaffold39285_4884-16164' '(gnl|cdd|35718 : 1158.0) no description available & (at1g78960 : 1000.0) Encodes a multifunctional 2-3-oxidosqualene (OS)-triterpene cyclase that can cyclize OS into lupeol, alpha- and beta-amyrin.; lupeol synthase 2 (LUP2); CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases family protein (TAIR:AT1G66960.1); Has 2115 Blast hits to 2006 proteins in 580 species: Archae - 2; Bacteria - 935; Metazoa - 110; Fungi - 239; Plants - 613; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|29791 : 837.0) no description available & (reliability: 2000.0) & (original description: Putative OSCBPW, Description = Lupeol synthase, PFAM = PF13249;PF13243)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'nbv0.3scaffold47462_1081-11385' '(gnl|cdd|35718 : 1291.0) no description available & (at1g78950 : 1234.0) Terpenoid cyclases family protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Squalene cyclase (InterPro:IPR018333), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: camelliol C synthase 1 (TAIR:AT1G78955.1); Has 2107 Blast hits to 2005 proteins in 574 species: Archae - 6; Bacteria - 886; Metazoa - 160; Fungi - 240; Plants - 609; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|29791 : 862.0) no description available & (reliability: 2468.0) & (original description: Putative TTS1, Description = Beta-amyrin synthase, PFAM = PF13243;PF13249)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'nbv0.3scaffold54148_9154-13728' '(gnl|cdd|29478 : 238.0) no description available & (p93665|dcs1_goshi : 189.0) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (at1g70080 : 146.0) Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14520.1); Has 1724 Blast hits to 1694 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1720; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative tps1, Description = Sesquiterpene synthase, PFAM = PF03936)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'nbv0.3scaffold67271_8078-9966' '(q40577|5eas_tobac : 266.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 185.0) no description available & (at1g70080 : 102.0) Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14520.1); Has 1724 Blast hits to 1694 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1720; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative eas, Description = Sesquiterpene synthase, PFAM = PF03936)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'nbv0.3scaffold81729_2321-6577' '(gnl|cdd|29478 : 569.0) no description available & (q40577|5eas_tobac : 532.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (at5g23960 : 373.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 746.0) & (original description: Putative TPS3, Description = Probable terpene synthase 3, PFAM = PF03936;PF01397)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'nbv0.3scaffold93197_1880-4658' '(q40577|5eas_tobac : 356.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 213.0) no description available & (at3g29410 : 137.0) Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: embryo, root, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1); Has 1701 Blast hits to 1673 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1697; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative tps1, Description = Sesquiterpene synthase, PFAM = PF01397)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'nbv0.3scaffold96346_1-4124' '(q40577|5eas_tobac : 1000.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 653.0) no description available & (at5g23960 : 400.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 800.0) & (original description: Putative EAS3, Description = 5-epi-aristolochene synthase, PFAM = PF03936;PF01397)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'nbv0.5scaffold1128_198933-203899' '(gnl|cdd|29478 : 398.0) no description available & (at3g25830 : 265.0) Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830.; "terpene synthase-like sequence-1,8-cineole" (TPS-CIN); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase-like sequence-1,8-cineole (TAIR:AT3G25820.1); Has 1733 Blast hits to 1705 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1729; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (q40577|5eas_tobac : 191.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (reliability: 530.0) & (original description: Putative tps1, Description = Limonene synthase, PFAM = PF01397;PF03936)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'nbv0.5scaffold2120_38860-41810' '(q40577|5eas_tobac : 452.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 292.0) no description available & (at5g23960 : 184.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 368.0) & (original description: Putative eas, Description = Sesquiterpene synthase, PFAM = PF01397)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'nbv0.5scaffold5532_125716-140579' '(gnl|cdd|29478 : 590.0) no description available & (at3g25830 : 470.0) Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830.; "terpene synthase-like sequence-1,8-cineole" (TPS-CIN); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase-like sequence-1,8-cineole (TAIR:AT3G25820.1); Has 1733 Blast hits to 1705 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1729; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (p93665|dcs1_goshi : 338.0) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (reliability: 940.0) & (original description: Putative TPS3, Description = (-)-camphene/tricyclene synthase, chloroplastic, PFAM = PF01397;PF03936)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'nbv0.5scaffold7914_9097-14027' '(gnl|cdd|29478 : 335.0) no description available & (at1g61680 : 304.0) terpene synthase 14 (TPS14); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase 02 (TAIR:AT4G16730.1). & (p93665|dcs1_goshi : 191.0) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (reliability: 608.0) & (original description: Putative TPS2, Description = Plastid terpene synthase, PFAM = PF03936;PF01397)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'nbv0.5scaffold8917_103-3009' '(q40577|5eas_tobac : 258.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 176.0) no description available & (at1g70080 : 95.1) Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14520.1); Has 1724 Blast hits to 1694 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1720; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative eas, Description = Sesquiterpene synthase, PFAM = PF03936)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben044scf00002759ctg015_1568-6217' '(q40577|5eas_tobac : 975.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 632.0) no description available & (at5g23960 : 393.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 786.0) & (original description: Putative EAS3, Description = 5-epi-aristolochene synthase, PFAM = PF01397;PF03936)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben044scf00004447ctg002_7043-11323' '(q40577|5eas_tobac : 983.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 647.0) no description available & (at5g23960 : 398.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 796.0) & (original description: Putative EAS3, Description = 5-epi-aristolochene synthase, PFAM = PF03936;PF01397)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben044scf00004447ctg007_3991-8389' '(q40577|5eas_tobac : 689.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 458.0) no description available & (at5g23960 : 287.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 574.0) & (original description: Putative eas, Description = 5-epi-aristolochene synthase, PFAM = PF03936;PF03936;PF01397)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben044scf00008452ctg041_304-2753' '(q40577|5eas_tobac : 211.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 127.0) no description available & (at3g29410 : 83.2) Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: embryo, root, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1); Has 1701 Blast hits to 1673 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1697; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative tps1, Description = 5-epi-aristolochene synthase, PFAM = PF01397)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben044scf00008452ctg041_502-3385' '(q40577|5eas_tobac : 531.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 376.0) no description available & (at5g23960 : 243.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 486.0) & (original description: Putative eas, Description = Sesquiterpene synthase, PFAM = PF01397;PF03936)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben044scf00021306ctg002_1-5947' '(gnl|cdd|29478 : 614.0) no description available & (at3g25830 : 489.0) Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830.; "terpene synthase-like sequence-1,8-cineole" (TPS-CIN); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase-like sequence-1,8-cineole (TAIR:AT3G25820.1); Has 1733 Blast hits to 1705 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1729; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (q40577|5eas_tobac : 342.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (reliability: 978.0) & (original description: Putative tps1, Description = Myrcene synthase, PFAM = PF03936;PF01397)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben044scf00023720ctg009_17629-27746' '(gnl|cdd|35718 : 1254.0) no description available & (at1g78950 : 1195.0) Terpenoid cyclases family protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Squalene cyclase (InterPro:IPR018333), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: camelliol C synthase 1 (TAIR:AT1G78955.1); Has 2107 Blast hits to 2005 proteins in 574 species: Archae - 6; Bacteria - 886; Metazoa - 160; Fungi - 240; Plants - 609; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|29791 : 831.0) no description available & (reliability: 2390.0) & (original description: Putative TTS1, Description = Beta-amyrin synthase, PFAM = PF13249;PF13243)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben044scf00041813ctg004_1-6218' '(gnl|cdd|35718 : 995.0) no description available & (at1g78950 : 919.0) Terpenoid cyclases family protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Squalene cyclase (InterPro:IPR018333), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: camelliol C synthase 1 (TAIR:AT1G78955.1); Has 2107 Blast hits to 2005 proteins in 574 species: Archae - 6; Bacteria - 886; Metazoa - 160; Fungi - 240; Plants - 609; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|29791 : 742.0) no description available & (reliability: 1838.0) & (original description: Putative bAS, Description = Beta-amyrin synthase, PFAM = PF13243;PF13249)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben044scf00050019ctg003_1-3311' '(gnl|cdd|29478 : 256.0) no description available & (at3g25810 : 246.0) Terpenoid cyclases/Protein prenyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase-like sequence-1,8-cineole (TAIR:AT3G25820.1); Has 1745 Blast hits to 1713 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1740; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (p59287|cass_ricco : 112.0) Casbene synthase, chloroplast precursor (EC 4.2.3.8) - Ricinus communis (Castor bean) & (reliability: 492.0) & (original description: Putative tps1, Description = Monoterpene synthase, PFAM = PF03936)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben044scf00055581ctg000_5015-9471' '(q40577|5eas_tobac : 375.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 233.0) no description available & (at3g14520 : 137.0) Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: embryo, sepal, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14540.1); Has 1704 Blast hits to 1673 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1700; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative HRR8, Description = Putative 5-epi-aristolochene synthase, PFAM = PF01397;PF03936)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf00017_185506-201806' '(gnl|cdd|35718 : 1155.0) no description available & (at2g07050 : 1114.0) Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.; cycloartenol synthase 1 (CAS1); FUNCTIONS IN: cycloartenol synthase activity; INVOLVED IN: pentacyclic triterpenoid biosynthetic process, thylakoid membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lanosterol synthase 1 (TAIR:AT3G45130.1); Has 2063 Blast hits to 1929 proteins in 563 species: Archae - 2; Bacteria - 902; Metazoa - 86; Fungi - 243; Plants - 616; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|29791 : 854.0) no description available & (reliability: 2086.0) & (original description: Putative GgCAS1, Description = Cycloartenol synthase, PFAM = PF13243;PF13249)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf00176_169092-177361' '(gnl|cdd|29478 : 618.0) no description available & (at4g16740 : 498.0) Encodes an (E,E)-alpha-farnesene synthase in the Col ecotype of Arabidopsis. This enzyme can also catalyze the formation of (E)-beta-ocimene as well as trace amounts of myrcene and other related compounds in vitro. The cytosolic localization of the protein may make it favor (E,E)-alpha-farnesene biosynthesis because the precursor of this product, FPP, is primarily cytosolic. Transcript levels for this gene increase in response to treatment with the jasmonic acid mimic coronalon or in response to the insect Plutella xylostella. TPS03 transcripts can also be detected in flowers. A similar protein from the C24 ecotype with one amino acid change (S267F) has a different substrate specificity.; terpene synthase 03 (TPS03); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase-like sequence-1,8-cineole (TAIR:AT3G25820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p93665|dcs1_goshi : 343.0) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (reliability: 996.0) & (original description: Putative tps1, Description = Myrcene synthase, PFAM = PF03936;PF01397)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf00176_380625-389262' '(gnl|cdd|29478 : 471.0) no description available & (at2g24210 : 335.0) terpene synthase 10 (TPS10); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase-like sequence-1,8-cineole (TAIR:AT3G25820.1); Has 1742 Blast hits to 1707 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1738; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (p59287|cass_ricco : 257.0) Casbene synthase, chloroplast precursor (EC 4.2.3.8) - Ricinus communis (Castor bean) & (reliability: 670.0) & (original description: Putative TPS7, Description = Alpha-farnesene synthase, PFAM = PF01397;PF03936)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf00397_856414-885647' '(gnl|cdd|29478 : 592.0) no description available & (at3g25810 : 485.0) Terpenoid cyclases/Protein prenyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase-like sequence-1,8-cineole (TAIR:AT3G25820.1); Has 1745 Blast hits to 1713 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1740; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (p93665|dcs1_goshi : 335.0) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (reliability: 970.0) & (original description: Putative tps1, Description = Myrcene synthase, PFAM = PF03936;PF03936;PF01397;PF01397)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf00712_190713-195062' '(q40577|5eas_tobac : 712.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 468.0) no description available & (at5g23960 : 296.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 592.0) & (original description: Putative eas, Description = 5-epi-aristolochene synthase, PFAM = PF01397;PF03936;PF03936)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf00739_497104-548028' '(gnl|cdd|35718 : 1290.0) no description available & (at1g78950 : 1195.0) Terpenoid cyclases family protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Squalene cyclase (InterPro:IPR018333), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: camelliol C synthase 1 (TAIR:AT1G78955.1); Has 2107 Blast hits to 2005 proteins in 574 species: Archae - 6; Bacteria - 886; Metazoa - 160; Fungi - 240; Plants - 609; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|29791 : 855.0) no description available & (reliability: 2390.0) & (original description: Putative TTS1, Description = Beta-amyrin synthase, PFAM = PF13243;PF13249)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf01660_285254-289336' '(gnl|cdd|29478 : 199.0) no description available & (p93665|dcs1_goshi : 165.0) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (at3g14520 : 117.0) Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: embryo, sepal, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14540.1); Has 1704 Blast hits to 1673 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1700; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative tps1, Description = Terpene synthase, PFAM = PF03936)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf01683_290111-294596' '(q40577|5eas_tobac : 1003.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 641.0) no description available & (at5g23960 : 391.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 782.0) & (original description: Putative EAS3, Description = 5-epi-aristolochene synthase, PFAM = PF01397;PF03936)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf02294_378084-383050' '(gnl|cdd|29478 : 585.0) no description available & (at3g25830 : 516.0) Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830.; "terpene synthase-like sequence-1,8-cineole" (TPS-CIN); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase-like sequence-1,8-cineole (TAIR:AT3G25820.1); Has 1733 Blast hits to 1705 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1729; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (p93665|dcs1_goshi : 302.0) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (reliability: 1032.0) & (original description: Putative tps1, Description = Myrcene synthase, PFAM = PF03936;PF01397)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf02340_739208-751020' '(at1g61120 : 637.0) Encodes a geranyllinalool synthase that produces a precursor to TMTT, a volatile plant defense C16-homoterpene. GES transcript levels rise in response to alamethicin, a fungal peptide mixture that damages membranes. This transcriptional response is blocked in JA biosynthetic and JA signaling mutants, but GES transcript levels still rise in response to alamethicin in mutants with salicylic acid and ethylene biosynthetic and/or signaling defects. GES transcripts also accumulate in response to a larval infestation. This enzyme does not localize to the plastids, and it may be present in the cytosol or endoplasmic reticulum.; terpene synthase 04 (TPS04); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT1G79460.1); Has 1879 Blast hits to 1869 proteins in 199 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 7; Plants - 1856; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (q39548|ksb_cucma : 288.0) Ent-kaurene synthase B, chloroplast precursor (EC 4.2.3.19) (KSB) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|29478 : 279.0) no description available & (reliability: 1274.0) & (original description: Putative GES, Description = (E,E)-geranyllinalool synthase, PFAM = PF01397;PF03936)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf02836_328827-340340' '(gnl|cdd|35718 : 676.0) no description available & (at2g07050 : 612.0) Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.; cycloartenol synthase 1 (CAS1); FUNCTIONS IN: cycloartenol synthase activity; INVOLVED IN: pentacyclic triterpenoid biosynthetic process, thylakoid membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lanosterol synthase 1 (TAIR:AT3G45130.1); Has 2063 Blast hits to 1929 proteins in 563 species: Archae - 2; Bacteria - 902; Metazoa - 86; Fungi - 243; Plants - 616; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|29791 : 451.0) no description available & (reliability: 1182.0) & (original description: Putative bas1, Description = Terpene cyclase/mutase family member, PFAM = PF13249;PF13243)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf03993_543845-548237' '(q40577|5eas_tobac : 980.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29478 : 645.0) no description available & (at5g23960 : 397.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 794.0) & (original description: Putative EAS3, Description = 5-epi-aristolochene synthase, PFAM = PF03936;PF01397)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf04741_597121-603609' '(at1g78510 : 521.0) Encodes a protein with solanesyl diphosphate synthase activity.; solanesyl diphosphate synthase 1 (SPS1); CONTAINS InterPro DOMAIN/s: Solanesyl diphosphate synthase (InterPro:IPR014120), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase-related (InterPro:IPR017446), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: solanesyl diphosphate synthase 2 (TAIR:AT1G17050.1); Has 16694 Blast hits to 16671 proteins in 2946 species: Archae - 341; Bacteria - 9481; Metazoa - 459; Fungi - 560; Plants - 421; Viruses - 0; Other Eukaryotes - 5432 (source: NCBI BLink). & (gnl|cdd|35995 : 323.0) no description available & (gnl|cdd|30491 : 261.0) no description available & (q43133|ggpps_sinal : 133.0) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Sinapis alb & (reliability: 1042.0) & (original description: Putative SPS1, Description = Solanesyl diphosphate synthase 1, PFAM = PF00348)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf07775_104060-112548' '(gnl|cdd|29478 : 597.0) no description available & (at3g25830 : 489.0) Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830.; "terpene synthase-like sequence-1,8-cineole" (TPS-CIN); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase-like sequence-1,8-cineole (TAIR:AT3G25820.1); Has 1733 Blast hits to 1705 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1729; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (p93665|dcs1_goshi : 308.0) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (reliability: 978.0) & (original description: Putative tps1, Description = Myrcene synthase, PFAM = PF01397;PF03936)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf08080_22342-28396' '(at2g07050 : 158.0) Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.; cycloartenol synthase 1 (CAS1); FUNCTIONS IN: cycloartenol synthase activity; INVOLVED IN: pentacyclic triterpenoid biosynthetic process, thylakoid membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lanosterol synthase 1 (TAIR:AT3G45130.1); Has 2063 Blast hits to 1929 proteins in 563 species: Archae - 2; Bacteria - 902; Metazoa - 86; Fungi - 243; Plants - 616; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|35718 : 156.0) no description available & (gnl|cdd|29791 : 122.0) no description available & (reliability: 308.0) & (original description: Putative bas1, Description = Terpene cyclase/mutase family member, PFAM = PF13243)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf08294_355244-376674' '(gnl|cdd|29478 : 612.0) no description available & (at3g25810 : 484.0) Terpenoid cyclases/Protein prenyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase-like sequence-1,8-cineole (TAIR:AT3G25820.1); Has 1745 Blast hits to 1713 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1740; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (p93665|dcs1_goshi : 353.0) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (reliability: 968.0) & (original description: Putative tps1, Description = Limonene synthase, PFAM = PF01397;PF03936)' T '16.1.5' 'secondary metabolism.isoprenoids.terpenoids' 'niben101scf16511_86672-90928' '(gnl|cdd|29478 : 596.0) no description available & (q40577|5eas_tobac : 558.0) Aristolochene synthase (EC 4.2.3.9) (5-epi-aristolochene synthase) (EAS) - Nicotiana tabacum (Common tobacco) & (at5g23960 : 388.0) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.; terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1). & (reliability: 776.0) & (original description: Putative TPS32, Description = Viridiflorene synthase, PFAM = PF03936;PF01397)' T '16.1.5.1001' 'secondary metabolism.isoprenoids.terpenoids' 'squalen' 'secondary metabolism, steroids, terpenoids' M '16.1.5.1002' 'secondary metabolism.isoprenoids.terpenoids' 'beta-sitosterol' 'secondary metabolism, Phytosterol, HEALTH: reduces blood cholesterol, ameliorates prostate problems' M '16.1.5.1003' 'secondary metabolism.isoprenoids.terpenoids' 'campesterol' 'secondary metabolism, Phytosterol (brassinosteroids synthesis)' M '16.2' 'secondary metabolism.phenylpropanoids' 'nbv0.3scaffold18174_18178-21578' '(o22309|7omt9_medsa : 326.0) Isoflavone-7-O-methyltransferase 9 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 9) (7 IOMT-9) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 279.0) no description available & (gnl|cdd|38388 : 225.0) no description available & (at4g35160 : 215.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 430.0) & (original description: Putative ROMT, Description = Trans-resveratrol di-O-methyltransferase, PFAM = PF00891;PF08100)' T '16.2' 'secondary metabolism.phenylpropanoids' 'nbv0.3scaffold23312_1-5005' '(gnl|cdd|82355 : 330.0) no description available & (gnl|cdd|35478 : 306.0) no description available & (at1g77670 : 298.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, transaminase activity, catalytic activity; INVOLVED IN: asparagine catabolic process, biosynthetic process, glutamate catabolic process to oxaloacetate, aspartate transamidation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase (TAIR:AT2G22250.3); Has 49407 Blast hits to 49405 proteins in 3078 species: Archae - 1141; Bacteria - 34862; Metazoa - 771; Fungi - 871; Plants - 1354; Viruses - 0; Other Eukaryotes - 10408 (source: NCBI BLink). & (reliability: 596.0) & (original description: Putative dapC, Description = Aminotransferase, PFAM = PF00155)' T '16.2' 'secondary metabolism.phenylpropanoids' 'nbv0.3scaffold24477_2325-11206' '(gnl|cdd|85101 : 235.0) no description available & (o24529|7omt8_medsa : 177.0) Isoflavone-7-O-methyltransferase 8 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 8) (7-IOMT-8) - Medicago sativa (Alfalfa) & (gnl|cdd|38388 : 151.0) no description available & (at4g35160 : 114.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative oomtA, Description = O-methyltransferase, putative, PFAM = PF00891)' T '16.2' 'secondary metabolism.phenylpropanoids' 'nbv0.5scaffold392_247425-259851' '(o22308|7omt6_medsa : 271.0) Isoflavone-7-O-methyltransferase 6 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 6) (7-IOMT-6) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 259.0) no description available & (gnl|cdd|38388 : 207.0) no description available & (at4g35160 : 193.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 386.0) & (original description: Putative oomtA, Description = Isoflavone-7-O-methyltransferase, PFAM = PF08100;PF00891)' T '16.2' 'secondary metabolism.phenylpropanoids' 'nbv0.5scaffold621_429796-435443' '(gnl|cdd|82355 : 317.0) no description available & (gnl|cdd|35478 : 286.0) no description available & (at1g77670 : 284.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, transaminase activity, catalytic activity; INVOLVED IN: asparagine catabolic process, biosynthetic process, glutamate catabolic process to oxaloacetate, aspartate transamidation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase (TAIR:AT2G22250.3); Has 49407 Blast hits to 49405 proteins in 3078 species: Archae - 1141; Bacteria - 34862; Metazoa - 771; Fungi - 871; Plants - 1354; Viruses - 0; Other Eukaryotes - 10408 (source: NCBI BLink). & (reliability: 568.0) & (original description: Putative dapC, Description = Aminotransferase, PFAM = PF00155)' T '16.2' 'secondary metabolism.phenylpropanoids' 'nbv0.5scaffold626_178989-183432' '(at4g35160 : 313.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|85101 : 225.0) no description available & (gnl|cdd|38388 : 220.0) no description available & (p28002|comt1_medsa : 187.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Medicago sativa (Alfalfa) & (reliability: 626.0) & (original description: Putative 6OMT, Description = (RS)-norcoclaurine 6-O-methyltransferase, PFAM = PF00891)' T '16.2' 'secondary metabolism.phenylpropanoids' 'nbv0.5scaffold896_196235-200858' '(at1g32910 : 424.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G78990.1); Has 2266 Blast hits to 2253 proteins in 120 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 22; Plants - 2240; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|66174 : 232.0) no description available & (o23917|hcbt2_diaca : 88.2) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 848.0) & (original description: Putative CFAT, Description = Coniferyl alcohol acyltransferase, PFAM = PF02458)' T '16.2' 'secondary metabolism.phenylpropanoids' 'nbv0.5scaffold2089_157603-160634' '(at1g32910 : 359.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G78990.1); Has 2266 Blast hits to 2253 proteins in 120 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 22; Plants - 2240; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|66174 : 199.0) no description available & (reliability: 718.0) & (original description: Putative CFAT, Description = Chloramphenicol acetyltransferase-like domain-containing protein, PFAM = PF02458)' T '16.2' 'secondary metabolism.phenylpropanoids' 'nbv0.5scaffold2823_83291-88071' '(at2g22570 : 326.0) encodes a nicotinamidase that converts nicotinamide into nicotinic acid. As such the encoded enzyme is involved in the pyridine nucleotide salvage pathway which may be connected to the de novo NAD biosynthesis through the ABA signaling pathway.; nicotinamidase 1 (NIC1); CONTAINS InterPro DOMAIN/s: Isochorismatase-like (InterPro:IPR000868); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29548 : 99.3) no description available & (reliability: 652.0) & (original description: Putative NIC1, Description = Nicotinamidase 1, PFAM = PF00857)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben044scf00004692ctg012_1-3335' '(o22308|7omt6_medsa : 265.0) Isoflavone-7-O-methyltransferase 6 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 6) (7-IOMT-6) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 257.0) no description available & (gnl|cdd|38388 : 200.0) no description available & (at4g35160 : 193.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 386.0) & (original description: Putative oomtA, Description = Isoflavone-7-O-methyltransferase, PFAM = PF08100;PF00891)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben044scf00012181ctg007_10139-13034' '(at3g26040 : 110.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 2415 Blast hits to 2403 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 2353; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|66174 : 88.5) no description available & (reliability: 212.0) & (original description: Putative PGSC0003DMG400024242, Description = , PFAM = PF02458)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben044scf00014992ctg021_1492-3452' '(o24529|7omt8_medsa : 110.0) Isoflavone-7-O-methyltransferase 8 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 8) (7-IOMT-8) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 87.6) no description available & (at4g35160 : 82.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative COMT, Description = Isoflavone-7-O-methyltransferase 9, PFAM = PF00891)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben044scf00015669ctg021_1-3769' '(at1g32910 : 430.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G78990.1); Has 2266 Blast hits to 2253 proteins in 120 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 22; Plants - 2240; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|66174 : 233.0) no description available & (o23918|hcbt3_diaca : 89.7) Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 860.0) & (original description: Putative CFAT, Description = Coniferyl alcohol acyltransferase, PFAM = PF02458)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben044scf00017878ctg002_1-2483' '(at2g23910 : 133.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G30470.1); Has 3676 Blast hits to 3671 proteins in 648 species: Archae - 0; Bacteria - 619; Metazoa - 80; Fungi - 341; Plants - 1990; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (gnl|cdd|36715 : 110.0) no description available & (reliability: 266.0) & (original description: Putative At2g23910, Description = Cinnamoyl-CoA reductase-related family protein, PFAM = )' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben044scf00051935ctg000_849-5406' '(at1g62940 : 763.0) encodes an acyl-CoA synthetase, has in vitro activity towards medium- to long-chain fatty acids and their hydroxylated derivatives. Expressed in the tapetum. Involved in pollen wall exine formation. Null mutants were devoid of pollen grains at anther maturity and were completely male sterile.; acyl-CoA synthetase 5 (ACOS5); CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: 4-coumarate:CoA ligase 2 (TAIR:AT3G21240.1); Has 80303 Blast hits to 72777 proteins in 3663 species: Archae - 1209; Bacteria - 52830; Metazoa - 3472; Fungi - 4003; Plants - 2782; Viruses - 1; Other Eukaryotes - 16006 (source: NCBI BLink). & (gnl|cdd|36391 : 472.0) no description available & (gnl|cdd|30666 : 397.0) no description available & (p14912|4cl1_petcr : 387.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (reliability: 1526.0) & (original description: Putative 4CLL1, Description = 4-coumarate--CoA ligase-like 1, PFAM = PF13193;PF00501)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf00116_657661-663850' '(at1g32910 : 476.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G78990.1); Has 2266 Blast hits to 2253 proteins in 120 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 22; Plants - 2240; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|66174 : 282.0) no description available & (o24645|hcbt1_diaca : 99.4) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 952.0) & (original description: Putative CFAT, Description = Coniferyl alcohol acyltransferase, PFAM = PF02458)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf00150_309714-313705' '(at1g28680 : 529.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G07080.1); Has 2577 Blast hits to 2568 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 64; Plants - 2509; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|66174 : 240.0) no description available & (o24645|hcbt1_diaca : 121.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1058.0) & (original description: Putative At1g28680, Description = Anthranilate N-hydroxycinnamoyl/benzoyltransferase, putative, PFAM = PF02458)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf00163_36738-43292' '(at2g33590 : 338.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: response to cadmium ion, lignin biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G33600.1); Has 13062 Blast hits to 13044 proteins in 1974 species: Archae - 275; Bacteria - 5592; Metazoa - 467; Fungi - 894; Plants - 2514; Viruses - 60; Other Eukaryotes - 3260 (source: NCBI BLink). & (gnl|cdd|36715 : 336.0) no description available & (p51110|dfra_vitvi : 188.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (gnl|cdd|30800 : 142.0) no description available & (reliability: 676.0) & (original description: Putative ccr2, Description = Cinnamoyl-CoA reductase 2, PFAM = PF01370)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf00261_179995-182369' '(at1g32100 : 173.0) Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol.; pinoresinol reductase 1 (PRR1); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: pinoresinol reductase 2 (TAIR:AT4G13660.1); Has 2085 Blast hits to 2085 proteins in 479 species: Archae - 27; Bacteria - 779; Metazoa - 2; Fungi - 496; Plants - 600; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|86857 : 109.0) no description available & (p52578|ifrh_soltu : 95.5) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (reliability: 346.0) & (original description: Putative PLR1, Description = (+)-pinoresinol reductase, PFAM = PF05368)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf00348_1055793-1059187' '(at5g01210 : 600.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT2G39980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 304.0) no description available & (o24645|hcbt1_diaca : 104.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1200.0) & (original description: Putative AT3, Description = Anthocyanin 5-aromatic acyltransferase, PFAM = PF02458)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf01063_206550-210035' '(at2g23910 : 246.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G30470.1); Has 3676 Blast hits to 3671 proteins in 648 species: Archae - 0; Bacteria - 619; Metazoa - 80; Fungi - 341; Plants - 1990; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (gnl|cdd|36715 : 202.0) no description available & (p51110|dfra_vitvi : 102.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (reliability: 492.0) & (original description: Putative Sb01g028030, Description = Putative uncharacterized protein Sb01g028030, PFAM = PF01370)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf01182_799061-802461' '(o22309|7omt9_medsa : 319.0) Isoflavone-7-O-methyltransferase 9 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 9) (7 IOMT-9) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 278.0) no description available & (gnl|cdd|38388 : 224.0) no description available & (at4g35160 : 208.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 416.0) & (original description: Putative ROMT, Description = Trans-resveratrol di-O-methyltransferase, PFAM = PF08100;PF00891)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf01184_1756068-1759203' '(gnl|cdd|85101 : 251.0) no description available & (o22308|7omt6_medsa : 205.0) Isoflavone-7-O-methyltransferase 6 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 6) (7-IOMT-6) - Medicago sativa (Alfalfa) & (gnl|cdd|38388 : 168.0) no description available & (at4g35160 : 128.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative oomtA, Description = O-methyltransferase, putative, PFAM = PF00891)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf01230_450482-457015' '(at5g23230 : 276.0) nicotinamidase 2 (NIC2); CONTAINS InterPro DOMAIN/s: Isochorismatase-like (InterPro:IPR000868); BEST Arabidopsis thaliana protein match is: nicotinamidase 3 (TAIR:AT5G23220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29548 : 148.0) no description available & (reliability: 552.0) & (original description: Putative NIC2, Description = Nicotinamidase 2, PFAM = PF00857)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf01418_67513-72791' '(at1g32100 : 459.0) Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol.; pinoresinol reductase 1 (PRR1); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: pinoresinol reductase 2 (TAIR:AT4G13660.1); Has 2085 Blast hits to 2085 proteins in 479 species: Archae - 27; Bacteria - 779; Metazoa - 2; Fungi - 496; Plants - 600; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (p52578|ifrh_soltu : 273.0) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (gnl|cdd|86857 : 253.0) no description available & (reliability: 918.0) & (original description: Putative lar, Description = (+)-pinoresinol reductase, PFAM = PF05368)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf01418_181246-184561' '(at1g32100 : 391.0) Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol.; pinoresinol reductase 1 (PRR1); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: pinoresinol reductase 2 (TAIR:AT4G13660.1); Has 2085 Blast hits to 2085 proteins in 479 species: Archae - 27; Bacteria - 779; Metazoa - 2; Fungi - 496; Plants - 600; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (p52578|ifrh_soltu : 258.0) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (gnl|cdd|86857 : 250.0) no description available & (reliability: 782.0) & (original description: Putative EGS1, Description = (+)-pinoresinol reductase, PFAM = PF05368)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf01432_482250-486574' '(at5g67150 : 361.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G50280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 231.0) no description available & (o24645|hcbt1_diaca : 86.3) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 722.0) & (original description: Putative At3g50280, Description = Uncharacterized acetyltransferase At3g50280, PFAM = PF02458)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf01773_370984-374699' '(at1g68540 : 442.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, oxidoreductase activity, binding, catalytic activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G25460.1). & (gnl|cdd|36715 : 367.0) no description available & (p51110|dfra_vitvi : 198.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (gnl|cdd|30800 : 130.0) no description available & (reliability: 884.0) & (original description: Putative TKPR2, Description = Tetraketide alpha-pyrone reductase 2, PFAM = PF01370)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf01917_1244145-1247285' '(at5g23230 : 278.0) nicotinamidase 2 (NIC2); CONTAINS InterPro DOMAIN/s: Isochorismatase-like (InterPro:IPR000868); BEST Arabidopsis thaliana protein match is: nicotinamidase 3 (TAIR:AT5G23220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29548 : 150.0) no description available & (reliability: 556.0) & (original description: Putative NIC2, Description = Nicotinamidase 2, PFAM = PF00857)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf01917_1244169-1247264' '(at5g23230 : 267.0) nicotinamidase 2 (NIC2); CONTAINS InterPro DOMAIN/s: Isochorismatase-like (InterPro:IPR000868); BEST Arabidopsis thaliana protein match is: nicotinamidase 3 (TAIR:AT5G23220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29548 : 148.0) no description available & (reliability: 534.0) & (original description: Putative NIC2, Description = Nicotinamidase 2, PFAM = PF00857)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf02073_71666-75201' '(o22308|7omt6_medsa : 270.0) Isoflavone-7-O-methyltransferase 6 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 6) (7-IOMT-6) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 235.0) no description available & (gnl|cdd|38388 : 173.0) no description available & (at4g35160 : 163.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative oomtA, Description = O-methyltransferase, putative, PFAM = PF08100;PF00891)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf02294_420449-424273' '(at2g22570 : 308.0) encodes a nicotinamidase that converts nicotinamide into nicotinic acid. As such the encoded enzyme is involved in the pyridine nucleotide salvage pathway which may be connected to the de novo NAD biosynthesis through the ABA signaling pathway.; nicotinamidase 1 (NIC1); CONTAINS InterPro DOMAIN/s: Isochorismatase-like (InterPro:IPR000868); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29548 : 92.7) no description available & (reliability: 616.0) & (original description: Putative NIC1, Description = Nicotinamidase 1, PFAM = PF00857)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf02385_80089-86549' '(at2g23910 : 234.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G30470.1); Has 3676 Blast hits to 3671 proteins in 648 species: Archae - 0; Bacteria - 619; Metazoa - 80; Fungi - 341; Plants - 1990; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (gnl|cdd|36715 : 227.0) no description available & (p51110|dfra_vitvi : 107.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (reliability: 468.0) & (original description: Putative Sb01g028030, Description = Putative uncharacterized protein Sb01g028030, PFAM = PF01073)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf02429_245538-253848' '(at1g77670 : 703.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, transaminase activity, catalytic activity; INVOLVED IN: asparagine catabolic process, biosynthetic process, glutamate catabolic process to oxaloacetate, aspartate transamidation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase (TAIR:AT2G22250.3); Has 49407 Blast hits to 49405 proteins in 3078 species: Archae - 1141; Bacteria - 34862; Metazoa - 771; Fungi - 871; Plants - 1354; Viruses - 0; Other Eukaryotes - 10408 (source: NCBI BLink). & (gnl|cdd|82355 : 470.0) no description available & (gnl|cdd|35478 : 409.0) no description available & (reliability: 1406.0) & (original description: Putative ybdL, Description = Class I/II aminotransferase, PFAM = PF00155)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf02688_80703-90855' '(gnl|cdd|81764 : 314.0) no description available & (gnl|cdd|36391 : 183.0) no description available & (at1g20480 : 84.3) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: 4-coumarate-CoA ligase activity; INVOLVED IN: phenylpropanoid metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: OPC-8:0 CoA ligase1 (TAIR:AT1G20510.1); Has 83252 Blast hits to 75672 proteins in 3756 species: Archae - 1173; Bacteria - 54045; Metazoa - 3530; Fungi - 4633; Plants - 2807; Viruses - 1; Other Eukaryotes - 17063 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative glysoja_005367, Description = Long-chain-fatty-acid--AMP ligase FadD28, PFAM = PF00501;PF13450;PF14602;PF00550;PF00132)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf02908_651860-656053' '(at4g35160 : 322.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|38388 : 256.0) no description available & (gnl|cdd|85101 : 227.0) no description available & (o24529|7omt8_medsa : 175.0) Isoflavone-7-O-methyltransferase 8 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 8) (7-IOMT-8) - Medicago sativa (Alfalfa) & (reliability: 644.0) & (original description: Putative 4'OMT2, Description = 3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase 2, PFAM = PF00891;PF08100)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf03021_10670-17555' '(at2g02400 : 491.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G58490.1); Has 17462 Blast hits to 17447 proteins in 2524 species: Archae - 423; Bacteria - 8786; Metazoa - 654; Fungi - 1071; Plants - 2738; Viruses - 70; Other Eukaryotes - 3720 (source: NCBI BLink). & (gnl|cdd|36715 : 338.0) no description available & (p51110|dfra_vitvi : 174.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (gnl|cdd|30800 : 121.0) no description available & (reliability: 982.0) & (original description: Putative CCR8, Description = Cinnamoyl-CoA reductase 8, PFAM = PF01370)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf03085_755684-759388' '(o24529|7omt8_medsa : 337.0) Isoflavone-7-O-methyltransferase 8 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 8) (7-IOMT-8) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 273.0) no description available & (gnl|cdd|38388 : 212.0) no description available & (at4g35160 : 204.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative ROMT, Description = Trans-resveratrol di-O-methyltransferase, PFAM = PF00891;PF08100)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf03241_26220-29983' '(at2g22570 : 324.0) encodes a nicotinamidase that converts nicotinamide into nicotinic acid. As such the encoded enzyme is involved in the pyridine nucleotide salvage pathway which may be connected to the de novo NAD biosynthesis through the ABA signaling pathway.; nicotinamidase 1 (NIC1); CONTAINS InterPro DOMAIN/s: Isochorismatase-like (InterPro:IPR000868); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29548 : 100.0) no description available & (reliability: 648.0) & (original description: Putative NIC1, Description = Nicotinamidase 1, PFAM = PF00857)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf04362_358605-363441' '(gnl|cdd|36391 : 474.0) no description available & (at1g20500 : 450.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: 4-coumarate-CoA ligase activity; INVOLVED IN: phenylpropanoid metabolic process, metabolic process; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT5G38120.1); Has 82776 Blast hits to 75503 proteins in 3739 species: Archae - 1179; Bacteria - 53477; Metazoa - 3434; Fungi - 4583; Plants - 2754; Viruses - 1; Other Eukaryotes - 17348 (source: NCBI BLink). & (gnl|cdd|30666 : 391.0) no description available & (o24145|4cl1_tobac : 344.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 900.0) & (original description: Putative 4CLL4, Description = 4-coumarate--CoA ligase-like 4, PFAM = PF13193;PF00501)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf04574_237583-242363' '(at2g22570 : 326.0) encodes a nicotinamidase that converts nicotinamide into nicotinic acid. As such the encoded enzyme is involved in the pyridine nucleotide salvage pathway which may be connected to the de novo NAD biosynthesis through the ABA signaling pathway.; nicotinamidase 1 (NIC1); CONTAINS InterPro DOMAIN/s: Isochorismatase-like (InterPro:IPR000868); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29548 : 99.3) no description available & (reliability: 652.0) & (original description: Putative NIC1, Description = Nicotinamidase 1, PFAM = PF00857)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf05308_21386-25721' '(at1g62940 : 763.0) encodes an acyl-CoA synthetase, has in vitro activity towards medium- to long-chain fatty acids and their hydroxylated derivatives. Expressed in the tapetum. Involved in pollen wall exine formation. Null mutants were devoid of pollen grains at anther maturity and were completely male sterile.; acyl-CoA synthetase 5 (ACOS5); CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: 4-coumarate:CoA ligase 2 (TAIR:AT3G21240.1); Has 80303 Blast hits to 72777 proteins in 3663 species: Archae - 1209; Bacteria - 52830; Metazoa - 3472; Fungi - 4003; Plants - 2782; Viruses - 1; Other Eukaryotes - 16006 (source: NCBI BLink). & (gnl|cdd|36391 : 477.0) no description available & (gnl|cdd|30666 : 399.0) no description available & (p14912|4cl1_petcr : 396.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (reliability: 1526.0) & (original description: Putative 4CLL1, Description = 4-coumarate--CoA ligase-like 1, PFAM = PF13193;PF00501)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf06105_475835-478970' '(o24529|7omt8_medsa : 186.0) Isoflavone-7-O-methyltransferase 8 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 8) (7-IOMT-8) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 154.0) no description available & (gnl|cdd|38388 : 125.0) no description available & (at4g35160 : 113.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative oomtA, Description = O-methyltransferase, putative, PFAM = PF00891;PF00891;PF08100)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf06984_237892-241190' '(at2g40230 : 525.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G27620.1); Has 2517 Blast hits to 2503 proteins in 143 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 52; Plants - 2458; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66174 : 217.0) no description available & (o24645|hcbt1_diaca : 127.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1050.0) & (original description: Putative AT9, Description = Alcohol acyltransferase, PFAM = PF02458)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf07493_416126-419484' '(at5g42830 : 500.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G07850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 241.0) no description available & (o24645|hcbt1_diaca : 97.4) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1000.0) & (original description: Putative AT3, Description = Anthocyanin 5-aromatic acyltransferase, PFAM = PF02458)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf08045_290218-293251' '(at2g19070 : 505.0) encodes a protein whose sequence is similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase from Dianthus caryophyllus (gi:2239091); spermidine hydroxycinnamoyl transferase (SHT); CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (TAIR:AT5G48930.1); Has 2876 Blast hits to 2852 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 114; Plants - 2754; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|66174 : 341.0) no description available & (o24645|hcbt1_diaca : 257.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1010.0) & (original description: Putative SHT, Description = Spermidine hydroxycinnamoyl transferase, PFAM = PF02458)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf09068_152112-157468' '(at4g35160 : 373.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|38388 : 247.0) no description available & (gnl|cdd|85101 : 227.0) no description available & (o24529|7omt8_medsa : 210.0) Isoflavone-7-O-methyltransferase 8 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 8) (7-IOMT-8) - Medicago sativa (Alfalfa) & (reliability: 746.0) & (original description: Putative 6OMT, Description = (RS)-norcoclaurine 6-O-methyltransferase, PFAM = PF00891)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf09883_136301-146166' '(at2g33590 : 394.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: response to cadmium ion, lignin biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G33600.1); Has 13062 Blast hits to 13044 proteins in 1974 species: Archae - 275; Bacteria - 5592; Metazoa - 467; Fungi - 894; Plants - 2514; Viruses - 60; Other Eukaryotes - 3260 (source: NCBI BLink). & (gnl|cdd|36715 : 367.0) no description available & (p51110|dfra_vitvi : 217.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (gnl|cdd|30800 : 137.0) no description available & (reliability: 788.0) & (original description: Putative ccr2, Description = Cinnamoyl-CoA reductase 2, PFAM = PF01370)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf11319_131832-138172' '(at1g20510 : 744.0) OPC-8:0 CoA ligase1 (OPCL1); FUNCTIONS IN: 4-coumarate-CoA ligase activity; INVOLVED IN: phenylpropanoid metabolic process, jasmonic acid biosynthetic process, response to wounding; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT1G20500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36391 : 533.0) no description available & (gnl|cdd|30666 : 409.0) no description available & (o24145|4cl1_tobac : 331.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1488.0) & (original description: Putative 4CLL5, Description = 4-coumarate--CoA ligase-like 5, PFAM = PF13193;PF00501)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf12846_30044-33946' '(at2g22570 : 333.0) encodes a nicotinamidase that converts nicotinamide into nicotinic acid. As such the encoded enzyme is involved in the pyridine nucleotide salvage pathway which may be connected to the de novo NAD biosynthesis through the ABA signaling pathway.; nicotinamidase 1 (NIC1); CONTAINS InterPro DOMAIN/s: Isochorismatase-like (InterPro:IPR000868); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29548 : 98.9) no description available & (reliability: 666.0) & (original description: Putative NIC1, Description = Nicotinamidase 1, PFAM = PF00857)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf12976_18266-21998' '(o22308|7omt6_medsa : 294.0) Isoflavone-7-O-methyltransferase 6 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 6) (7-IOMT-6) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 248.0) no description available & (gnl|cdd|38388 : 197.0) no description available & (at4g35160 : 178.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative ROMT, Description = Trans-resveratrol di-O-methyltransferase, PFAM = PF00891;PF08100)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf15227_95039-99396' '(at2g23910 : 253.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G30470.1); Has 3676 Blast hits to 3671 proteins in 648 species: Archae - 0; Bacteria - 619; Metazoa - 80; Fungi - 341; Plants - 1990; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (gnl|cdd|36715 : 225.0) no description available & (p51110|dfra_vitvi : 115.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (reliability: 506.0) & (original description: Putative Sb01g028030, Description = Putative uncharacterized protein Sb01g028030, PFAM = PF01073)' T '16.2' 'secondary metabolism.phenylpropanoids' 'niben101scf17267_2622-7114' '(at5g67150 : 331.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G50280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 254.0) no description available & (o24645|hcbt1_diaca : 100.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 662.0) & (original description: Putative At3g50280, Description = Uncharacterized acetyltransferase At3g50280, PFAM = PF02458)' T '16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'nbv0.3scaffold99445_179-3720' '(at3g50740 : 394.0) UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism.; UDP-glucosyl transferase 72E1 (UGT72E1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G66690.1); Has 8063 Blast hits to 8012 proteins in 453 species: Archae - 0; Bacteria - 455; Metazoa - 2482; Fungi - 35; Plants - 4969; Viruses - 57; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 198.0) no description available & (p56725|zox_phavu : 165.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 81.5) no description available & (reliability: 788.0) & (original description: Putative GT5, Description = Anthocyanidin 3-O-glucosyltransferase 5, PFAM = PF00201)' T '16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'nbv0.5scaffold121_97229-100296' '(p56725|zox_phavu : 218.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at3g46670 : 117.0) UDP-glucosyl transferase 76E11 (UGT76E11); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 76E12 (TAIR:AT3G46660.1); Has 7711 Blast hits to 7649 proteins in 441 species: Archae - 0; Bacteria - 362; Metazoa - 2148; Fungi - 33; Plants - 5036; Viruses - 65; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36406 : 84.2) no description available & (reliability: 218.0) & (original description: Putative ZOG2, Description = Glycosyltransferase, PFAM = PF00201)' T '16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'nbv0.5scaffold2129_320350-326010' '(at2g18570 : 157.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G18560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 156.0) no description available & (q43716|ufog_pethy : 145.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (reliability: 312.0) & (original description: Putative NSGT1, Description = Truncated non-smoky glycosyltransferase 1, PFAM = PF08268;PF00201)' T '16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'niben044scf00007351ctg001_1127-3780' '(at3g50740 : 262.0) UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism.; UDP-glucosyl transferase 72E1 (UGT72E1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G66690.1); Has 8063 Blast hits to 8012 proteins in 453 species: Archae - 0; Bacteria - 455; Metazoa - 2482; Fungi - 35; Plants - 4969; Viruses - 57; Other Eukaryotes - 65 (source: NCBI BLink). & (p56725|zox_phavu : 180.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|36406 : 132.0) no description available & (gnl|cdd|79510 : 84.6) no description available & (reliability: 524.0) & (original description: Putative ugt1, Description = Glycosyltransferase, PFAM = PF00201)' T '16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'niben044scf00016319ctg004_2399-5950' '(p56725|zox_phavu : 486.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36770 : 182.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7907 Blast hits to 7812 proteins in 435 species: Archae - 0; Bacteria - 273; Metazoa - 2293; Fungi - 33; Plants - 5130; Viruses - 108; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 156.0) no description available & (gnl|cdd|79510 : 95.4) no description available & (reliability: 336.0) & (original description: Putative GT2, Description = Glycosyltransferase, PFAM = PF00201)' T '16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'niben044scf00022926ctg008_12198-17190' '(at4g01070 : 401.0) the glycosyltransferase (UGT72B1) is involved in metabolizing xenobiotica (chloroaniline and chlorophenole). Comparison between wild type and knock-out mutant demonstrates the central role of this gene for metabolizing chloroaniline but significantly less for chlorophenole. The glucosyltransferase preferred UDP-xylose over UDP-glucose indicating its (additional) functioning as a xylosyltransferase in planta; GT72B1; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1). & (gnl|cdd|36406 : 171.0) no description available & (q8rxa5|czog2_maize : 168.0) Cis-zeatin O-glucosyltransferase 2 (EC 2.4.1.215) (cisZOG2) - Zea mays (Maize) & (gnl|cdd|79510 : 80.8) no description available & (reliability: 764.0) & (original description: Putative AS, Description = Hydroquinone glucosyltransferase, PFAM = PF00201)' T '16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'niben101scf00560_516677-523047' '(p56725|zox_phavu : 398.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36780 : 160.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 157.0) no description available & (gnl|cdd|79510 : 81.9) no description available & (reliability: 304.0) & (original description: Putative PGSC0003DMG400032511, Description = Glycosyltransferase, PFAM = PF00201)' T '16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'niben101scf01386_22394-25809' '(p56725|zox_phavu : 434.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36780 : 186.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 155.0) no description available & (gnl|cdd|79510 : 88.5) no description available & (reliability: 360.0) & (original description: Putative CISZOG1, Description = Cis-zeatin O-glucosyltransferase 1, PFAM = PF00201)' T '16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'niben101scf01557_595710-599216' '(p56725|zox_phavu : 435.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at3g50740 : 196.0) UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism.; UDP-glucosyl transferase 72E1 (UGT72E1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G66690.1); Has 8063 Blast hits to 8012 proteins in 453 species: Archae - 0; Bacteria - 455; Metazoa - 2482; Fungi - 35; Plants - 4969; Viruses - 57; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 165.0) no description available & (gnl|cdd|79510 : 90.4) no description available & (reliability: 392.0) & (original description: Putative PGSC0003DMG400035370, Description = Glycosyltransferase, PFAM = PF00201)' T '16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'niben101scf01777_334394-337809' '(p56725|zox_phavu : 421.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36770 : 188.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7907 Blast hits to 7812 proteins in 435 species: Archae - 0; Bacteria - 273; Metazoa - 2293; Fungi - 33; Plants - 5130; Viruses - 108; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 158.0) no description available & (reliability: 354.0) & (original description: Putative ZOG9, Description = Glycosyltransferase, PFAM = PF00201)' T '16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'niben101scf07089_244139-247527' '(p56725|zox_phavu : 429.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g15490 : 188.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 152.0) no description available & (gnl|cdd|79510 : 81.1) no description available & (reliability: 354.0) & (original description: Putative ZOG1, Description = Glycosyltransferase, PFAM = PF00201)' T '16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'niben101scf09184_306997-312657' '(gnl|cdd|36406 : 158.0) no description available & (at2g18570 : 157.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G18560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q43716|ufog_pethy : 145.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (reliability: 310.0) & (original description: Putative bfgt1, Description = Glycosyltransferase, PFAM = PF08268;PF00201)' T '16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'niben101scf11008_99362-102786' '(p56725|zox_phavu : 459.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34138 : 191.0) UDP-glucosyl transferase 73B1 (UGT73B1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B3 (TAIR:AT4G34131.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 151.0) no description available & (gnl|cdd|79510 : 98.9) no description available & (reliability: 344.0) & (original description: Putative ZOG7, Description = Glycosyltransferase, PFAM = PF00201)' T '16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'niben101scf12290_157761-160507' '(p56725|zox_phavu : 270.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34138 : 164.0) UDP-glucosyl transferase 73B1 (UGT73B1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B3 (TAIR:AT4G34131.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 110.0) no description available & (gnl|cdd|79510 : 81.1) no description available & (reliability: 296.0) & (original description: Putative GT2, Description = Glycosyltransferase, PFAM = PF00201)' T '16.2.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'niben101scf13710_282548-286011' '(at3g50740 : 437.0) UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism.; UDP-glucosyl transferase 72E1 (UGT72E1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G66690.1); Has 8063 Blast hits to 8012 proteins in 453 species: Archae - 0; Bacteria - 455; Metazoa - 2482; Fungi - 35; Plants - 4969; Viruses - 57; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 185.0) no description available & (p56725|zox_phavu : 173.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 84.2) no description available & (reliability: 874.0) & (original description: Putative GT5, Description = Anthocyanidin 3-O-glucosyltransferase 5, PFAM = PF00201)' T '16.2.1.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL' 'niben044scf00004018ctg000_4718-11274' '(p25872|pal1_tobac : 1414.0) Phenylalanine ammonia-lyase (EC 4.3.1.5) - Nicotiana tabacum (Common tobacco) & (at2g37040 : 1199.0) Encodes PAL1, a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).; PHE ammonia lyase 1 (PAL1); FUNCTIONS IN: phenylalanine ammonia-lyase activity; INVOLVED IN: in 10 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanine/histidine ammonia-lyase (InterPro:IPR001106), Phenylalanine/histidine ammonia-lyases, active site (InterPro:IPR022313), L-Aspartase-like (InterPro:IPR008948), Phenylalanine ammonia-lyase (InterPro:IPR005922); BEST Arabidopsis thaliana protein match is: phenylalanine ammonia-lyase 2 (TAIR:AT3G53260.1); Has 4888 Blast hits to 4867 proteins in 1414 species: Archae - 40; Bacteria - 2973; Metazoa - 79; Fungi - 127; Plants - 1176; Viruses - 0; Other Eukaryotes - 493 (source: NCBI BLink). & (gnl|cdd|35443 : 1080.0) no description available & (gnl|cdd|84620 : 710.0) no description available & (reliability: 2398.0) & (original description: Putative PAL, Description = Phenylalanine ammonia-lyase, PFAM = PF00221)' T '16.2.1.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL' 'niben044scf00008842ctg003_1-5723' '(p25872|pal1_tobac : 1221.0) Phenylalanine ammonia-lyase (EC 4.3.1.5) - Nicotiana tabacum (Common tobacco) & (at3g53260 : 1183.0) Encodes phenylalanine lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).; phenylalanine ammonia-lyase 2 (PAL2); FUNCTIONS IN: phenylalanine ammonia-lyase activity; INVOLVED IN: response to oxidative stress, response to karrikin, phenylpropanoid biosynthetic process, response to wounding, defense response; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanine/histidine ammonia-lyase (InterPro:IPR001106), Phenylalanine/histidine ammonia-lyases, active site (InterPro:IPR022313), L-Aspartase-like (InterPro:IPR008948), Phenylalanine ammonia-lyase (InterPro:IPR005922); BEST Arabidopsis thaliana protein match is: PHE ammonia lyase 1 (TAIR:AT2G37040.1); Has 4835 Blast hits to 4816 proteins in 1397 species: Archae - 40; Bacteria - 2928; Metazoa - 79; Fungi - 127; Plants - 1172; Viruses - 0; Other Eukaryotes - 489 (source: NCBI BLink). & (gnl|cdd|35443 : 1081.0) no description available & (gnl|cdd|84620 : 700.0) no description available & (reliability: 2366.0) & (original description: Putative PAL, Description = Phenylalanine ammonia-lyase, PFAM = PF00221)' T '16.2.1.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL' 'niben101scf03712_166303-171777' '(p25872|pal1_tobac : 1224.0) Phenylalanine ammonia-lyase (EC 4.3.1.5) - Nicotiana tabacum (Common tobacco) & (at3g53260 : 1186.0) Encodes phenylalanine lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).; phenylalanine ammonia-lyase 2 (PAL2); FUNCTIONS IN: phenylalanine ammonia-lyase activity; INVOLVED IN: response to oxidative stress, response to karrikin, phenylpropanoid biosynthetic process, response to wounding, defense response; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanine/histidine ammonia-lyase (InterPro:IPR001106), Phenylalanine/histidine ammonia-lyases, active site (InterPro:IPR022313), L-Aspartase-like (InterPro:IPR008948), Phenylalanine ammonia-lyase (InterPro:IPR005922); BEST Arabidopsis thaliana protein match is: PHE ammonia lyase 1 (TAIR:AT2G37040.1); Has 4835 Blast hits to 4816 proteins in 1397 species: Archae - 40; Bacteria - 2928; Metazoa - 79; Fungi - 127; Plants - 1172; Viruses - 0; Other Eukaryotes - 489 (source: NCBI BLink). & (gnl|cdd|35443 : 1083.0) no description available & (gnl|cdd|84620 : 705.0) no description available & (reliability: 2372.0) & (original description: Putative pal, Description = Phenylanaline ammonia-lyase, PFAM = PF00221)' T '16.2.1.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL' 'niben101scf04090_192912-199357' '(p25872|pal1_tobac : 1415.0) Phenylalanine ammonia-lyase (EC 4.3.1.5) - Nicotiana tabacum (Common tobacco) & (at2g37040 : 1204.0) Encodes PAL1, a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).; PHE ammonia lyase 1 (PAL1); FUNCTIONS IN: phenylalanine ammonia-lyase activity; INVOLVED IN: in 10 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanine/histidine ammonia-lyase (InterPro:IPR001106), Phenylalanine/histidine ammonia-lyases, active site (InterPro:IPR022313), L-Aspartase-like (InterPro:IPR008948), Phenylalanine ammonia-lyase (InterPro:IPR005922); BEST Arabidopsis thaliana protein match is: phenylalanine ammonia-lyase 2 (TAIR:AT3G53260.1); Has 4888 Blast hits to 4867 proteins in 1414 species: Archae - 40; Bacteria - 2973; Metazoa - 79; Fungi - 127; Plants - 1176; Viruses - 0; Other Eukaryotes - 493 (source: NCBI BLink). & (gnl|cdd|35443 : 1087.0) no description available & (gnl|cdd|84620 : 712.0) no description available & (reliability: 2408.0) & (original description: Putative PAL, Description = Phenylalanine ammonia-lyase, PFAM = PF00221)' T '16.2.1.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL' 'niben101scf04375_264067-271551' '(p45733|pal3_tobac : 1194.0) Phenylalanine ammonia-lyase (EC 4.3.1.5) - Nicotiana tabacum (Common tobacco) & (at3g53260 : 1169.0) Encodes phenylalanine lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).; phenylalanine ammonia-lyase 2 (PAL2); FUNCTIONS IN: phenylalanine ammonia-lyase activity; INVOLVED IN: response to oxidative stress, response to karrikin, phenylpropanoid biosynthetic process, response to wounding, defense response; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanine/histidine ammonia-lyase (InterPro:IPR001106), Phenylalanine/histidine ammonia-lyases, active site (InterPro:IPR022313), L-Aspartase-like (InterPro:IPR008948), Phenylalanine ammonia-lyase (InterPro:IPR005922); BEST Arabidopsis thaliana protein match is: PHE ammonia lyase 1 (TAIR:AT2G37040.1); Has 4835 Blast hits to 4816 proteins in 1397 species: Archae - 40; Bacteria - 2928; Metazoa - 79; Fungi - 127; Plants - 1172; Viruses - 0; Other Eukaryotes - 489 (source: NCBI BLink). & (gnl|cdd|35443 : 1071.0) no description available & (gnl|cdd|84620 : 698.0) no description available & (reliability: 2338.0) & (original description: Putative PAL1, Description = Phenylalanine ammonia-lyase, PFAM = PF00221)' T '16.2.1.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL' 'niben101scf05442_364301-372955' '(p45733|pal3_tobac : 1417.0) Phenylalanine ammonia-lyase (EC 4.3.1.5) - Nicotiana tabacum (Common tobacco) & (at2g37040 : 1189.0) Encodes PAL1, a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).; PHE ammonia lyase 1 (PAL1); FUNCTIONS IN: phenylalanine ammonia-lyase activity; INVOLVED IN: in 10 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanine/histidine ammonia-lyase (InterPro:IPR001106), Phenylalanine/histidine ammonia-lyases, active site (InterPro:IPR022313), L-Aspartase-like (InterPro:IPR008948), Phenylalanine ammonia-lyase (InterPro:IPR005922); BEST Arabidopsis thaliana protein match is: phenylalanine ammonia-lyase 2 (TAIR:AT3G53260.1); Has 4888 Blast hits to 4867 proteins in 1414 species: Archae - 40; Bacteria - 2973; Metazoa - 79; Fungi - 127; Plants - 1176; Viruses - 0; Other Eukaryotes - 493 (source: NCBI BLink). & (gnl|cdd|35443 : 1087.0) no description available & (gnl|cdd|84620 : 707.0) no description available & (reliability: 2378.0) & (original description: Putative pal, Description = Phenylalanine ammonia-lyase, PFAM = PF00221)' T '16.2.1.1' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL' 'niben101scf12881_1229-6780' '(p45733|pal3_tobac : 1417.0) Phenylalanine ammonia-lyase (EC 4.3.1.5) - Nicotiana tabacum (Common tobacco) & (at3g53260 : 1187.0) Encodes phenylalanine lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).; phenylalanine ammonia-lyase 2 (PAL2); FUNCTIONS IN: phenylalanine ammonia-lyase activity; INVOLVED IN: response to oxidative stress, response to karrikin, phenylpropanoid biosynthetic process, response to wounding, defense response; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanine/histidine ammonia-lyase (InterPro:IPR001106), Phenylalanine/histidine ammonia-lyases, active site (InterPro:IPR022313), L-Aspartase-like (InterPro:IPR008948), Phenylalanine ammonia-lyase (InterPro:IPR005922); BEST Arabidopsis thaliana protein match is: PHE ammonia lyase 1 (TAIR:AT2G37040.1); Has 4835 Blast hits to 4816 proteins in 1397 species: Archae - 40; Bacteria - 2928; Metazoa - 79; Fungi - 127; Plants - 1172; Viruses - 0; Other Eukaryotes - 489 (source: NCBI BLink). & (gnl|cdd|35443 : 1083.0) no description available & (gnl|cdd|84620 : 706.0) no description available & (reliability: 2374.0) & (original description: Putative pal, Description = Phenylalanine ammonia-lyase, PFAM = PF00221)' T '16.2.1.2' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.C4H' 'niben044scf00002272ctg004_624-5831' '(q42797|tcmo_soybn : 866.0) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) - Glycine max (Soybean) & (at2g30490 : 824.0) Encodes a cinnamate-4-hydroxylase. Mutations in this gene impact phenylpropanoid metabolism, growth and development.; cinnamate-4-hydroxylase (C4H); FUNCTIONS IN: trans-cinnamate 4-monooxygenase activity; INVOLVED IN: in 9 processes; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 3 (TAIR:AT2G40890.1); Has 31278 Blast hits to 31002 proteins in 1609 species: Archae - 48; Bacteria - 2734; Metazoa - 11804; Fungi - 6596; Plants - 9113; Viruses - 3; Other Eukaryotes - 980 (source: NCBI BLink). & (gnl|cdd|35378 : 418.0) no description available & (gnl|cdd|84486 : 357.0) no description available & (reliability: 1648.0) & (original description: Putative c4H, Description = Cinnamate 4-hydroxylase, PFAM = PF00067)' T '16.2.1.2' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.C4H' 'niben101scf01085_480282-485087' '(q42797|tcmo_soybn : 865.0) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) - Glycine max (Soybean) & (at2g30490 : 822.0) Encodes a cinnamate-4-hydroxylase. Mutations in this gene impact phenylpropanoid metabolism, growth and development.; cinnamate-4-hydroxylase (C4H); FUNCTIONS IN: trans-cinnamate 4-monooxygenase activity; INVOLVED IN: in 9 processes; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 3 (TAIR:AT2G40890.1); Has 31278 Blast hits to 31002 proteins in 1609 species: Archae - 48; Bacteria - 2734; Metazoa - 11804; Fungi - 6596; Plants - 9113; Viruses - 3; Other Eukaryotes - 980 (source: NCBI BLink). & (gnl|cdd|35378 : 416.0) no description available & (gnl|cdd|84486 : 354.0) no description available & (reliability: 1644.0) & (original description: Putative c4H, Description = Cinnamate 4-hydroxylase, PFAM = PF00067)' T '16.2.1.2' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.C4H' 'niben101scf02316_150724-156465' '(p48522|tcmo_catro : 863.0) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at2g30490 : 822.0) Encodes a cinnamate-4-hydroxylase. Mutations in this gene impact phenylpropanoid metabolism, growth and development.; cinnamate-4-hydroxylase (C4H); FUNCTIONS IN: trans-cinnamate 4-monooxygenase activity; INVOLVED IN: in 9 processes; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 3 (TAIR:AT2G40890.1); Has 31278 Blast hits to 31002 proteins in 1609 species: Archae - 48; Bacteria - 2734; Metazoa - 11804; Fungi - 6596; Plants - 9113; Viruses - 3; Other Eukaryotes - 980 (source: NCBI BLink). & (gnl|cdd|35378 : 414.0) no description available & (gnl|cdd|84486 : 349.0) no description available & (reliability: 1644.0) & (original description: Putative c4H, Description = Cinnamate 4-hydroxylase, PFAM = PF00067)' T '16.2.1.2' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.C4H' 'niben101scf06277_536692-539612' '(q42797|tcmo_soybn : 599.0) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) - Glycine max (Soybean) & (at2g30490 : 568.0) Encodes a cinnamate-4-hydroxylase. Mutations in this gene impact phenylpropanoid metabolism, growth and development.; cinnamate-4-hydroxylase (C4H); FUNCTIONS IN: trans-cinnamate 4-monooxygenase activity; INVOLVED IN: in 9 processes; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 3 (TAIR:AT2G40890.1); Has 31278 Blast hits to 31002 proteins in 1609 species: Archae - 48; Bacteria - 2734; Metazoa - 11804; Fungi - 6596; Plants - 9113; Viruses - 3; Other Eukaryotes - 980 (source: NCBI BLink). & (gnl|cdd|35378 : 381.0) no description available & (gnl|cdd|84486 : 319.0) no description available & (reliability: 1136.0) & (original description: Putative c4H, Description = Cinnamate 4-hydroxylase, PFAM = PF00067)' T '16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'nbv0.5scaffold4950_69376-75921' '(p31687|4cl2_soybn : 777.0) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) (Clone 4CL16) - Glycine max (Soybean) & (at1g65060 : 705.0) encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. mRNA levels are not induced in response to wounding or to fungal infection by P. parasitica. mRNA is expressed in flowers, to a lesser degree in mature leaves and siliques and marginally in seedling roots and bolting stems of mature plants. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, cinnamic acid and 5-OH-ferulic acid. At4CL3 was unable to use sinapic acid as substrate.; 4-coumarate:CoA ligase 3 (4CL3); CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: 4-coumarate:CoA ligase 2 (TAIR:AT3G21240.1); Has 78268 Blast hits to 71395 proteins in 3651 species: Archae - 1111; Bacteria - 51774; Metazoa - 3299; Fungi - 4373; Plants - 2538; Viruses - 1; Other Eukaryotes - 15172 (source: NCBI BLink). & (gnl|cdd|36391 : 501.0) no description available & (gnl|cdd|30666 : 409.0) no description available & (reliability: 1410.0) & (original description: Putative 4CL, Description = 4-coumarate:CoA ligase, PFAM = PF00501;PF13193)' T '16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'niben101scf00278_1544590-1550674' '(at4g19010 : 654.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: 4-coumarate-CoA ligase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: OPC-8:0 CoA ligase1 (TAIR:AT1G20510.1); Has 83687 Blast hits to 76218 proteins in 3879 species: Archae - 1158; Bacteria - 54713; Metazoa - 3437; Fungi - 4716; Plants - 2771; Viruses - 1; Other Eukaryotes - 16891 (source: NCBI BLink). & (gnl|cdd|36391 : 474.0) no description available & (gnl|cdd|30666 : 392.0) no description available & (o24145|4cl1_tobac : 328.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1308.0) & (original description: Putative 4CLL6, Description = 4-coumarate--CoA ligase-like 6, PFAM = PF00501;PF13193)' T '16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'niben101scf01063_510720-517835' '(p31687|4cl2_soybn : 769.0) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) (Clone 4CL16) - Glycine max (Soybean) & (at1g65060 : 706.0) encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. mRNA levels are not induced in response to wounding or to fungal infection by P. parasitica. mRNA is expressed in flowers, to a lesser degree in mature leaves and siliques and marginally in seedling roots and bolting stems of mature plants. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, cinnamic acid and 5-OH-ferulic acid. At4CL3 was unable to use sinapic acid as substrate.; 4-coumarate:CoA ligase 3 (4CL3); CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: 4-coumarate:CoA ligase 2 (TAIR:AT3G21240.1); Has 78268 Blast hits to 71395 proteins in 3651 species: Archae - 1111; Bacteria - 51774; Metazoa - 3299; Fungi - 4373; Plants - 2538; Viruses - 1; Other Eukaryotes - 15172 (source: NCBI BLink). & (gnl|cdd|36391 : 502.0) no description available & (gnl|cdd|30666 : 411.0) no description available & (reliability: 1412.0) & (original description: Putative 4CL, Description = 4-coumarate:CoA ligase, PFAM = PF00501;PF13193)' T '16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'niben101scf02228_444289-452356' '(at4g05160 : 773.0) Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At4g05160 preferentially activates fatty acids with medium chain length (C6:0 and C7:0) as well as even-numbered long-chain fatty acids (C14:0, C16:0 and C18:0). At4g05160 was also able to catalyze the conversion of OPC-6:0 to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis.; AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: 4-coumarate-CoA ligase activity, fatty-acyl-CoA synthase activity; INVOLVED IN: jasmonic acid biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: OPC-8:0 CoA ligase1 (TAIR:AT1G20510.1); Has 86858 Blast hits to 79133 proteins in 3797 species: Archae - 1159; Bacteria - 54259; Metazoa - 3570; Fungi - 4802; Plants - 2877; Viruses - 1; Other Eukaryotes - 20190 (source: NCBI BLink). & (gnl|cdd|36391 : 511.0) no description available & (gnl|cdd|30666 : 426.0) no description available & (o24145|4cl1_tobac : 409.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1546.0) & (original description: Putative 4CLL7, Description = 4-coumarate--CoA ligase-like 7, PFAM = PF13193;PF00501)' T '16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'niben101scf02413_91890-98655' '(o24145|4cl1_tobac : 832.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (at1g51680 : 751.0) encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. In addition to 4-coumarate, it also converts ferulate. The catalytic efficiency was in the following (descending) order: p-coumaric acid, ferulic acid, caffeic acid and 5-OH-ferulic acid. At4CL1 was unable to use sinapic acid as substrate.; 4-coumarate:CoA ligase 1 (4CL1); CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: 4-coumarate:CoA ligase 2 (TAIR:AT3G21240.1); Has 83069 Blast hits to 75791 proteins in 3772 species: Archae - 1181; Bacteria - 53827; Metazoa - 3457; Fungi - 4480; Plants - 2791; Viruses - 1; Other Eukaryotes - 17332 (source: NCBI BLink). & (gnl|cdd|36391 : 531.0) no description available & (gnl|cdd|30666 : 407.0) no description available & (reliability: 1502.0) & (original description: Putative 4CL2, Description = 4-coumarate--CoA ligase 2, PFAM = PF13193;PF00501)' T '16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'niben101scf02688_80703-90855' '(gnl|cdd|81764 : 314.0) no description available & (gnl|cdd|36391 : 183.0) no description available & (at1g20480 : 84.3) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: 4-coumarate-CoA ligase activity; INVOLVED IN: phenylpropanoid metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: OPC-8:0 CoA ligase1 (TAIR:AT1G20510.1); Has 83252 Blast hits to 75672 proteins in 3756 species: Archae - 1173; Bacteria - 54045; Metazoa - 3530; Fungi - 4633; Plants - 2807; Viruses - 1; Other Eukaryotes - 17063 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative glysoja_005367, Description = Long-chain-fatty-acid--AMP ligase FadD28, PFAM = PF00501;PF13450;PF14602;PF00550;PF00132)' T '16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'niben101scf03224_8135-14712' '(o24145|4cl1_tobac : 901.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (at3g21240 : 737.0) encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, 5-OH-ferulic acid and cinnamic acid. At4CL2 was unable to use sinapic acid as substrate.; 4-coumarate:CoA ligase 2 (4CL2); CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: 4-coumarate:CoA ligase 1 (TAIR:AT1G51680.1); Has 86092 Blast hits to 78635 proteins in 3758 species: Archae - 1209; Bacteria - 54193; Metazoa - 3597; Fungi - 4717; Plants - 2816; Viruses - 1; Other Eukaryotes - 19559 (source: NCBI BLink). & (gnl|cdd|36391 : 513.0) no description available & (gnl|cdd|30666 : 417.0) no description available & (reliability: 1474.0) & (original description: Putative 4CL2, Description = 4-coumarate--CoA ligase 2, PFAM = PF13193;PF00501)' T '16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'niben101scf04362_358605-363441' '(gnl|cdd|36391 : 474.0) no description available & (at1g20500 : 450.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: 4-coumarate-CoA ligase activity; INVOLVED IN: phenylpropanoid metabolic process, metabolic process; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT5G38120.1); Has 82776 Blast hits to 75503 proteins in 3739 species: Archae - 1179; Bacteria - 53477; Metazoa - 3434; Fungi - 4583; Plants - 2754; Viruses - 1; Other Eukaryotes - 17348 (source: NCBI BLink). & (gnl|cdd|30666 : 391.0) no description available & (o24145|4cl1_tobac : 344.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 856.0) & (original description: Putative 4CLL4, Description = 4-coumarate--CoA ligase-like 4, PFAM = PF13193;PF00501)' T '16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'niben101scf04701_36-7160' '(at4g19010 : 629.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: 4-coumarate-CoA ligase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: OPC-8:0 CoA ligase1 (TAIR:AT1G20510.1); Has 83687 Blast hits to 76218 proteins in 3879 species: Archae - 1158; Bacteria - 54713; Metazoa - 3437; Fungi - 4716; Plants - 2771; Viruses - 1; Other Eukaryotes - 16891 (source: NCBI BLink). & (gnl|cdd|36391 : 470.0) no description available & (gnl|cdd|30666 : 391.0) no description available & (o24145|4cl1_tobac : 304.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1258.0) & (original description: Putative 4CLL6, Description = 4-coumarate--CoA ligase-like 6, PFAM = PF13193;PF00501)' T '16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'niben101scf05750_296711-303877' '(at5g63380 : 642.0) Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis.; AMP-dependent synthetase and ligase family protein; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: OPC-8:0 CoA ligase1 (TAIR:AT1G20510.1); Has 81844 Blast hits to 74712 proteins in 3773 species: Archae - 1219; Bacteria - 53606; Metazoa - 3425; Fungi - 4605; Plants - 2698; Viruses - 1; Other Eukaryotes - 16290 (source: NCBI BLink). & (gnl|cdd|36391 : 485.0) no description available & (gnl|cdd|30666 : 372.0) no description available & (o24145|4cl1_tobac : 314.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1284.0) & (original description: Putative 4CLL9, Description = 4-coumarate--CoA ligase-like 9, PFAM = PF13193;PF00501)' T '16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'niben101scf07623_249980-257129' '(o24145|4cl1_tobac : 1100.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (at3g21240 : 798.0) encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, 5-OH-ferulic acid and cinnamic acid. At4CL2 was unable to use sinapic acid as substrate.; 4-coumarate:CoA ligase 2 (4CL2); CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: 4-coumarate:CoA ligase 1 (TAIR:AT1G51680.1); Has 86092 Blast hits to 78635 proteins in 3758 species: Archae - 1209; Bacteria - 54193; Metazoa - 3597; Fungi - 4717; Plants - 2816; Viruses - 1; Other Eukaryotes - 19559 (source: NCBI BLink). & (gnl|cdd|36391 : 534.0) no description available & (gnl|cdd|30666 : 426.0) no description available & (reliability: 1596.0) & (original description: Putative 4CL1, Description = 4-coumarate--CoA ligase 1, PFAM = PF00501;PF13193)' T '16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'niben101scf10885_101552-113602' '(at5g63380 : 600.0) Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis.; AMP-dependent synthetase and ligase family protein; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: OPC-8:0 CoA ligase1 (TAIR:AT1G20510.1); Has 81844 Blast hits to 74712 proteins in 3773 species: Archae - 1219; Bacteria - 53606; Metazoa - 3425; Fungi - 4605; Plants - 2698; Viruses - 1; Other Eukaryotes - 16290 (source: NCBI BLink). & (gnl|cdd|36391 : 479.0) no description available & (gnl|cdd|30666 : 370.0) no description available & (o24145|4cl1_tobac : 316.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1200.0) & (original description: Putative 4CLL9, Description = 4-coumarate--CoA ligase-like 9, PFAM = PF13193;PF00501)' T '16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'niben101scf10885_101602-107619' '(at5g63380 : 168.0) Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis.; AMP-dependent synthetase and ligase family protein; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: OPC-8:0 CoA ligase1 (TAIR:AT1G20510.1); Has 81844 Blast hits to 74712 proteins in 3773 species: Archae - 1219; Bacteria - 53606; Metazoa - 3425; Fungi - 4605; Plants - 2698; Viruses - 1; Other Eukaryotes - 16290 (source: NCBI BLink). & (gnl|cdd|36391 : 138.0) no description available & (gnl|cdd|30666 : 114.0) no description available & (q42982|4cl2_orysa : 113.0) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Oryza sativa (Rice) & (reliability: 336.0) & (original description: Putative 4CL, Description = 4-coumarate--CoA ligase-like 9, PFAM = PF00501)' T '16.2.1.3' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL' 'niben101scf12725_66466-71449' '(at5g63380 : 488.0) Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis.; AMP-dependent synthetase and ligase family protein; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: OPC-8:0 CoA ligase1 (TAIR:AT1G20510.1); Has 81844 Blast hits to 74712 proteins in 3773 species: Archae - 1219; Bacteria - 53606; Metazoa - 3425; Fungi - 4605; Plants - 2698; Viruses - 1; Other Eukaryotes - 16290 (source: NCBI BLink). & (gnl|cdd|36391 : 473.0) no description available & (gnl|cdd|30666 : 369.0) no description available & (o24145|4cl1_tobac : 313.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 976.0) & (original description: Putative 4CLL9, Description = 4-coumarate--CoA ligase-like 9, PFAM = PF00501;PF13193)' T '16.2.1.4' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.HCT' 'niben101scf01062_96839-102858' '(at5g48930 : 527.0) At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth.; hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (HCT); CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G57840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 350.0) no description available & (o23917|hcbt2_diaca : 337.0) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1054.0) & (original description: Putative hqt, Description = Hydroxycinnamoyl CoA quinate transferase, PFAM = PF02458)' T '16.2.1.4' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.HCT' 'niben101scf02562_100660-105169' '(at5g48930 : 504.0) At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth.; hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (HCT); CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G57840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 346.0) no description available & (o23917|hcbt2_diaca : 340.0) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1008.0) & (original description: Putative hqt, Description = Hydroxycinnamoyl CoA quinate transferase, PFAM = PF02458)' T '16.2.1.4' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.HCT' 'niben101scf03224_420106-434494' '(at5g48930 : 705.0) At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth.; hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (HCT); CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G57840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o23917|hcbt2_diaca : 386.0) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|66174 : 376.0) no description available & (reliability: 1410.0) & (original description: Putative HCT6, Description = Hydroxcinnamoyl-CoA quinate/shikimate hydroxycinnamoyltransferase, PFAM = PF02458)' T '16.2.1.4' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.HCT' 'niben101scf03790_83233-87424' '(at5g48930 : 519.0) At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth.; hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (HCT); CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G57840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o23917|hcbt2_diaca : 352.0) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|66174 : 348.0) no description available & (reliability: 1038.0) & (original description: Putative hqt, Description = Hydroxycinnamoyl CoA quinate transferase, PFAM = PF02458)' T '16.2.1.4' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.HCT' 'niben101scf03862_218641-221963' '(gnl|cdd|66174 : 256.0) no description available & (at5g48930 : 231.0) At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth.; hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (HCT); CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G57840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24645|hcbt1_diaca : 192.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 462.0) & (original description: Putative ACT, Description = Agmatine coumaroyltransferase-1, PFAM = PF02458)' T '16.2.1.4' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.HCT' 'niben101scf05767_176293-179606' '(gnl|cdd|66174 : 231.0) no description available & (at5g48930 : 204.0) At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth.; hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (HCT); CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G57840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24645|hcbt1_diaca : 180.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 408.0) & (original description: Putative AT1, Description = Putrescine hydroxycinnamoyl transferase, PFAM = PF02458)' T '16.2.1.4' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.HCT' 'niben101scf06295_106539-109852' '(gnl|cdd|66174 : 257.0) no description available & (at5g48930 : 215.0) At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth.; hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (HCT); CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G57840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24645|hcbt1_diaca : 195.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 430.0) & (original description: Putative ACT, Description = Anthranilate N-benzoyltransferase protein, putative, PFAM = PF02458)' T '16.2.1.4' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.HCT' 'niben101scf09061_66375-69682' '(gnl|cdd|66174 : 262.0) no description available & (at5g48930 : 207.0) At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth.; hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (HCT); CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G57840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24645|hcbt1_diaca : 191.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 414.0) & (original description: Putative ACT, Description = Anthranilate N-benzoyltransferase protein, putative, PFAM = PF02458)' T '16.2.1.4' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.HCT' 'niben101scf09928_98275-106973' '(at5g48930 : 719.0) At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth.; hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (HCT); CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G57840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o23917|hcbt2_diaca : 389.0) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|66174 : 381.0) no description available & (reliability: 1438.0) & (original description: Putative HST, Description = Shikimate O-hydroxycinnamoyltransferase, PFAM = PF02458)' T '16.2.1.5' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.C3H' 'nbv0.5scaffold1804_176579-181767' '(o48922|c98a2_soybn : 903.0) Cytochrome P450 98A2 (EC 1.14.-.-) - Glycine max (Soybean) & (at2g40890 : 876.0) encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level.; cytochrome P450, family 98, subfamily A, polypeptide 3 (CYP98A3); FUNCTIONS IN: monooxygenase activity, p-coumarate 3-hydroxylase activity; INVOLVED IN: coumarin biosynthetic process, lignin biosynthetic process, phenylpropanoid biosynthetic process, flavonoid biosynthetic process; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, microsome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 9 (TAIR:AT1G74550.1); Has 33899 Blast hits to 33682 proteins in 1752 species: Archae - 48; Bacteria - 3997; Metazoa - 11870; Fungi - 7164; Plants - 9566; Viruses - 3; Other Eukaryotes - 1251 (source: NCBI BLink). & (gnl|cdd|35378 : 466.0) no description available & (gnl|cdd|84486 : 305.0) no description available & (reliability: 1752.0) & (original description: Putative c3'h, Description = p-coumaroyl ester 3'-hydroxylases, PFAM = PF00067)' T '16.2.1.5' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.C3H' 'niben044scf00004491ctg003_1005-2918' '(o48922|c98a2_soybn : 214.0) Cytochrome P450 98A2 (EC 1.14.-.-) - Glycine max (Soybean) & (at2g40890 : 213.0) encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level.; cytochrome P450, family 98, subfamily A, polypeptide 3 (CYP98A3); FUNCTIONS IN: monooxygenase activity, p-coumarate 3-hydroxylase activity; INVOLVED IN: coumarin biosynthetic process, lignin biosynthetic process, phenylpropanoid biosynthetic process, flavonoid biosynthetic process; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, microsome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 9 (TAIR:AT1G74550.1); Has 33899 Blast hits to 33682 proteins in 1752 species: Archae - 48; Bacteria - 3997; Metazoa - 11870; Fungi - 7164; Plants - 9566; Viruses - 3; Other Eukaryotes - 1251 (source: NCBI BLink). & (gnl|cdd|35378 : 155.0) no description available & (reliability: 426.0) & (original description: Putative C3H, Description = Coumarate-3-hydroxylase, PFAM = PF00067)' T '16.2.1.5' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.C3H' 'niben101scf00077_280688-291266' '(at2g40890 : 672.0) encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level.; cytochrome P450, family 98, subfamily A, polypeptide 3 (CYP98A3); FUNCTIONS IN: monooxygenase activity, p-coumarate 3-hydroxylase activity; INVOLVED IN: coumarin biosynthetic process, lignin biosynthetic process, phenylpropanoid biosynthetic process, flavonoid biosynthetic process; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, microsome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 9 (TAIR:AT1G74550.1); Has 33899 Blast hits to 33682 proteins in 1752 species: Archae - 48; Bacteria - 3997; Metazoa - 11870; Fungi - 7164; Plants - 9566; Viruses - 3; Other Eukaryotes - 1251 (source: NCBI BLink). & (o48922|c98a2_soybn : 666.0) Cytochrome P450 98A2 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|35378 : 468.0) no description available & (gnl|cdd|84486 : 305.0) no description available & (reliability: 1344.0) & (original description: Putative c3'h, Description = p-coumarate 3-hydroxylase, PFAM = PF00067)' T '16.2.1.5' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.C3H' 'niben101scf00077_500308-506827' '(o48922|c98a2_soybn : 788.0) Cytochrome P450 98A2 (EC 1.14.-.-) - Glycine max (Soybean) & (at2g40890 : 786.0) encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level.; cytochrome P450, family 98, subfamily A, polypeptide 3 (CYP98A3); FUNCTIONS IN: monooxygenase activity, p-coumarate 3-hydroxylase activity; INVOLVED IN: coumarin biosynthetic process, lignin biosynthetic process, phenylpropanoid biosynthetic process, flavonoid biosynthetic process; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, microsome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 9 (TAIR:AT1G74550.1); Has 33899 Blast hits to 33682 proteins in 1752 species: Archae - 48; Bacteria - 3997; Metazoa - 11870; Fungi - 7164; Plants - 9566; Viruses - 3; Other Eukaryotes - 1251 (source: NCBI BLink). & (gnl|cdd|35378 : 480.0) no description available & (gnl|cdd|84486 : 321.0) no description available & (reliability: 1572.0) & (original description: Putative c3'h, Description = p-coumaroyl ester 3'-hydroxylases, PFAM = PF00067)' T '16.2.1.5' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.C3H' 'niben101scf00857_222695-230797' '(at2g40890 : 786.0) encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level.; cytochrome P450, family 98, subfamily A, polypeptide 3 (CYP98A3); FUNCTIONS IN: monooxygenase activity, p-coumarate 3-hydroxylase activity; INVOLVED IN: coumarin biosynthetic process, lignin biosynthetic process, phenylpropanoid biosynthetic process, flavonoid biosynthetic process; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, microsome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 9 (TAIR:AT1G74550.1); Has 33899 Blast hits to 33682 proteins in 1752 species: Archae - 48; Bacteria - 3997; Metazoa - 11870; Fungi - 7164; Plants - 9566; Viruses - 3; Other Eukaryotes - 1251 (source: NCBI BLink). & (o48922|c98a2_soybn : 783.0) Cytochrome P450 98A2 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|35378 : 483.0) no description available & (gnl|cdd|84486 : 318.0) no description available & (reliability: 1572.0) & (original description: Putative C3H1, Description = p-coumaroyl quinate/shikimate 3'-hydroxylase, PFAM = PF00067)' T '16.2.1.5' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.C3H' 'niben101scf01018_798125-804372' '(o48922|c98a2_soybn : 707.0) Cytochrome P450 98A2 (EC 1.14.-.-) - Glycine max (Soybean) & (at2g40890 : 701.0) encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level.; cytochrome P450, family 98, subfamily A, polypeptide 3 (CYP98A3); FUNCTIONS IN: monooxygenase activity, p-coumarate 3-hydroxylase activity; INVOLVED IN: coumarin biosynthetic process, lignin biosynthetic process, phenylpropanoid biosynthetic process, flavonoid biosynthetic process; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, microsome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 9 (TAIR:AT1G74550.1); Has 33899 Blast hits to 33682 proteins in 1752 species: Archae - 48; Bacteria - 3997; Metazoa - 11870; Fungi - 7164; Plants - 9566; Viruses - 3; Other Eukaryotes - 1251 (source: NCBI BLink). & (gnl|cdd|35378 : 475.0) no description available & (gnl|cdd|84486 : 311.0) no description available & (reliability: 1402.0) & (original description: Putative c3'h, Description = p-coumaroyl ester 3'-hydroxylases, PFAM = PF00067)' T '16.2.1.5' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.C3H' 'niben101scf03170_383534-389949' '(o48922|c98a2_soybn : 698.0) Cytochrome P450 98A2 (EC 1.14.-.-) - Glycine max (Soybean) & (at2g40890 : 694.0) encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level.; cytochrome P450, family 98, subfamily A, polypeptide 3 (CYP98A3); FUNCTIONS IN: monooxygenase activity, p-coumarate 3-hydroxylase activity; INVOLVED IN: coumarin biosynthetic process, lignin biosynthetic process, phenylpropanoid biosynthetic process, flavonoid biosynthetic process; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, microsome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 9 (TAIR:AT1G74550.1); Has 33899 Blast hits to 33682 proteins in 1752 species: Archae - 48; Bacteria - 3997; Metazoa - 11870; Fungi - 7164; Plants - 9566; Viruses - 3; Other Eukaryotes - 1251 (source: NCBI BLink). & (gnl|cdd|35378 : 476.0) no description available & (gnl|cdd|84486 : 314.0) no description available & (reliability: 1388.0) & (original description: Putative c3'h, Description = p-coumaroyl ester 3'-hydroxylases, PFAM = PF00067)' T '16.2.1.5' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.C3H' 'niben101scf10560_161543-166994' '(o48922|c98a2_soybn : 899.0) Cytochrome P450 98A2 (EC 1.14.-.-) - Glycine max (Soybean) & (at2g40890 : 874.0) encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level.; cytochrome P450, family 98, subfamily A, polypeptide 3 (CYP98A3); FUNCTIONS IN: monooxygenase activity, p-coumarate 3-hydroxylase activity; INVOLVED IN: coumarin biosynthetic process, lignin biosynthetic process, phenylpropanoid biosynthetic process, flavonoid biosynthetic process; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, microsome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 9 (TAIR:AT1G74550.1); Has 33899 Blast hits to 33682 proteins in 1752 species: Archae - 48; Bacteria - 3997; Metazoa - 11870; Fungi - 7164; Plants - 9566; Viruses - 3; Other Eukaryotes - 1251 (source: NCBI BLink). & (gnl|cdd|35378 : 462.0) no description available & (gnl|cdd|84486 : 305.0) no description available & (reliability: 1748.0) & (original description: Putative c3'h, Description = p-coumaroyl ester 3'-hydroxylases, PFAM = PF00067)' T '16.2.1.6' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCoAOMT' 'nbv0.3scaffold43780_4291-13475' '(at3g62000 : 355.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: O-methyltransferase activity; LOCATED IN: cytosol; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G61990.1). & (gnl|cdd|36876 : 264.0) no description available & (gnl|cdd|85557 : 247.0) no description available & (q9xgd5|camt2_maize : 154.0) Caffeoyl-CoA O-methyltransferase 2 (EC 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase 2) (CCoAMT-2) (CCoAOMT-2) - Zea mays (Maize) & (reliability: 710.0) & (original description: Putative safC, Description = Putative O-methyltransferase, PFAM = PF01596)' T '16.2.1.6' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCoAOMT' 'nbv0.5scaffold1429_1813-52523' '(o24144|camt1_tobac : 292.0) Caffeoyl-CoA O-methyltransferase 1 (EC 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase 1) (CCoAMT-1) (CCoAOMT-1) - Nicotiana tabacum (Common tobacco) & (at4g34050 : 266.0) caffeoyl coenzyme A O-methyltransferase 1 (CCoAOMT1); FUNCTIONS IN: caffeoyl-CoA O-methyltransferase activity; INVOLVED IN: coumarin biosynthetic process, response to cadmium ion; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G26220.1); Has 3628 Blast hits to 3614 proteins in 1109 species: Archae - 11; Bacteria - 2045; Metazoa - 117; Fungi - 47; Plants - 463; Viruses - 0; Other Eukaryotes - 945 (source: NCBI BLink). & (gnl|cdd|85557 : 199.0) no description available & (gnl|cdd|36876 : 168.0) no description available & (reliability: 532.0) & (original description: Putative gpm99a, Description = Caffeoyl-CoA O-methyltransferase, PFAM = PF01596)' T '16.2.1.6' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCoAOMT' 'niben044scf00001639ctg011_557-3012' '(at3g62000 : 80.9) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: O-methyltransferase activity; LOCATED IN: cytosol; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G61990.1). & (reliability: 161.8) & (original description: Putative At3g62000, Description = S-adenosyl-L-methionine-dependent methyltransferase-like protein, PFAM = )' T '16.2.1.6' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCoAOMT' 'niben101scf04003_856889-860005' '(o24151|camt4_tobac : 495.0) Caffeoyl-CoA O-methyltransferase 4 (EC 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase 4) (CCoAMT-4) (CCoAOMT-4) - Nicotiana tabacum (Common tobacco) & (at4g34050 : 442.0) caffeoyl coenzyme A O-methyltransferase 1 (CCoAOMT1); FUNCTIONS IN: caffeoyl-CoA O-methyltransferase activity; INVOLVED IN: coumarin biosynthetic process, response to cadmium ion; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G26220.1); Has 3628 Blast hits to 3614 proteins in 1109 species: Archae - 11; Bacteria - 2045; Metazoa - 117; Fungi - 47; Plants - 463; Viruses - 0; Other Eukaryotes - 945 (source: NCBI BLink). & (gnl|cdd|85557 : 316.0) no description available & (gnl|cdd|36876 : 279.0) no description available & (reliability: 884.0) & (original description: Putative CCOAOMT1, Description = Caffeoyl-CoA O-methyltransferase 1, PFAM = PF01596)' T '16.2.1.6' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCoAOMT' 'niben101scf04028_278713-282129' '(at4g26220 : 326.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: O-methyltransferase activity; LOCATED IN: cytosol; EXPRESSED IN: shoot, inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage, seed development stages; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G34050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o65162|camt_mescr : 294.0) Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCoAMT) (CCoAOMT) - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|85557 : 265.0) no description available & (gnl|cdd|36876 : 263.0) no description available & (reliability: 652.0) & (original description: Putative At4g26220, Description = Probable caffeoyl-CoA O-methyltransferase At4g26220, PFAM = PF01596)' T '16.2.1.6' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCoAOMT' 'niben101scf04028_285659-289896' '(at4g26220 : 316.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: O-methyltransferase activity; LOCATED IN: cytosol; EXPRESSED IN: shoot, inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage, seed development stages; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G34050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o65162|camt_mescr : 302.0) Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCoAMT) (CCoAOMT) - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|85557 : 263.0) no description available & (gnl|cdd|36876 : 258.0) no description available & (reliability: 632.0) & (original description: Putative At4g26220, Description = Probable caffeoyl-CoA O-methyltransferase At4g26220, PFAM = PF01596)' T '16.2.1.6' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCoAOMT' 'niben101scf06156_101601-273764' '(at3g62000 : 315.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: O-methyltransferase activity; LOCATED IN: cytosol; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G61990.1). & (gnl|cdd|36876 : 237.0) no description available & (gnl|cdd|85557 : 227.0) no description available & (q9xgd5|camt2_maize : 148.0) Caffeoyl-CoA O-methyltransferase 2 (EC 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase 2) (CCoAMT-2) (CCoAOMT-2) - Zea mays (Maize) & (reliability: 630.0) & (original description: Putative safC, Description = Putative O-methyltransferase, PFAM = PF01596)' T '16.2.1.6' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCoAOMT' 'niben101scf06344_666613-670520' '(q42945|camt6_tobac : 491.0) Caffeoyl-CoA O-methyltransferase 6 (EC 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase 6) (CCoAMT-6) (CCoAOMT-6) - Nicotiana tabacum (Common tobacco) & (at4g34050 : 448.0) caffeoyl coenzyme A O-methyltransferase 1 (CCoAOMT1); FUNCTIONS IN: caffeoyl-CoA O-methyltransferase activity; INVOLVED IN: coumarin biosynthetic process, response to cadmium ion; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G26220.1); Has 3628 Blast hits to 3614 proteins in 1109 species: Archae - 11; Bacteria - 2045; Metazoa - 117; Fungi - 47; Plants - 463; Viruses - 0; Other Eukaryotes - 945 (source: NCBI BLink). & (gnl|cdd|85557 : 320.0) no description available & (gnl|cdd|36876 : 284.0) no description available & (reliability: 896.0) & (original description: Putative CCOAOMT6, Description = Caffeoyl-CoA O-methyltransferase 6, PFAM = PF01596)' T '16.2.1.6' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCoAOMT' 'niben101scf13886_71569-87252' '(at4g26220 : 327.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: O-methyltransferase activity; LOCATED IN: cytosol; EXPRESSED IN: shoot, inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage, seed development stages; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G34050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o65162|camt_mescr : 275.0) Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCoAMT) (CCoAOMT) - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|85557 : 269.0) no description available & (gnl|cdd|36876 : 262.0) no description available & (reliability: 654.0) & (original description: Putative At4g26220, Description = Probable caffeoyl-CoA O-methyltransferase At4g26220, PFAM = PF01596)' T '16.2.1.7' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCR1' 'nbv0.3scaffold41316_12124-18483' '(at5g14700 : 148.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G23910.1); Has 4116 Blast hits to 4108 proteins in 752 species: Archae - 4; Bacteria - 797; Metazoa - 69; Fungi - 490; Plants - 1968; Viruses - 42; Other Eukaryotes - 746 (source: NCBI BLink). & (gnl|cdd|36715 : 128.0) no description available & (reliability: 296.0) & (original description: Putative BnaA02g02250D, Description = Cinnamoyl-CoA reductase, PFAM = PF01073)' T '16.2.1.7' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCR1' 'nbv0.5scaffold2527_95563-102565' '(at1g15950 : 496.0) Encodes a cinnamoyl CoA reductase. Involved in lignin biosynthesis.; cinnamoyl coa reductase 1 (CCR1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: cinnamoyl coa reductase (TAIR:AT1G80820.1); Has 11995 Blast hits to 11983 proteins in 1896 species: Archae - 218; Bacteria - 5371; Metazoa - 416; Fungi - 931; Plants - 2539; Viruses - 54; Other Eukaryotes - 2466 (source: NCBI BLink). & (gnl|cdd|36715 : 421.0) no description available & (p51104|dfra_diaca : 246.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|30800 : 138.0) no description available & (reliability: 992.0) & (original description: Putative ccr, Description = Cinnamoyl-CoA reductase, PFAM = PF01370)' T '16.2.1.7' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCR1' 'nbv0.5scaffold2527_95584-102695' '(at1g15950 : 500.0) Encodes a cinnamoyl CoA reductase. Involved in lignin biosynthesis.; cinnamoyl coa reductase 1 (CCR1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: cinnamoyl coa reductase (TAIR:AT1G80820.1); Has 11995 Blast hits to 11983 proteins in 1896 species: Archae - 218; Bacteria - 5371; Metazoa - 416; Fungi - 931; Plants - 2539; Viruses - 54; Other Eukaryotes - 2466 (source: NCBI BLink). & (gnl|cdd|36715 : 420.0) no description available & (p51104|dfra_diaca : 245.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|30800 : 139.0) no description available & (reliability: 1000.0) & (original description: Putative ccr, Description = Cinnamoyl CoA reductase, PFAM = PF01370)' T '16.2.1.7' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCR1' 'niben044scf00000100ctg008_1-4949' '(at1g15950 : 502.0) Encodes a cinnamoyl CoA reductase. Involved in lignin biosynthesis.; cinnamoyl coa reductase 1 (CCR1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: cinnamoyl coa reductase (TAIR:AT1G80820.1); Has 11995 Blast hits to 11983 proteins in 1896 species: Archae - 218; Bacteria - 5371; Metazoa - 416; Fungi - 931; Plants - 2539; Viruses - 54; Other Eukaryotes - 2466 (source: NCBI BLink). & (gnl|cdd|36715 : 420.0) no description available & (p51104|dfra_diaca : 241.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|30800 : 138.0) no description available & (reliability: 1004.0) & (original description: Putative ccr, Description = Cinnamoyl-CoA reductase, PFAM = PF01370)' T '16.2.1.7' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCR1' 'niben044scf00017878ctg002_1-2483' '(at2g23910 : 133.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G30470.1); Has 3676 Blast hits to 3671 proteins in 648 species: Archae - 0; Bacteria - 619; Metazoa - 80; Fungi - 341; Plants - 1990; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (gnl|cdd|36715 : 110.0) no description available & (reliability: 264.0) & (original description: Putative At2g23910, Description = Cinnamoyl-CoA reductase-related family protein, PFAM = )' T '16.2.1.7' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCR1' 'niben101scf01063_206550-210035' '(at2g23910 : 246.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G30470.1); Has 3676 Blast hits to 3671 proteins in 648 species: Archae - 0; Bacteria - 619; Metazoa - 80; Fungi - 341; Plants - 1990; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (gnl|cdd|36715 : 202.0) no description available & (p51110|dfra_vitvi : 102.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (reliability: 462.0) & (original description: Putative Sb01g028030, Description = Putative uncharacterized protein Sb01g028030, PFAM = PF01370)' T '16.2.1.7' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCR1' 'niben101scf02385_80089-86549' '(at2g23910 : 234.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G30470.1); Has 3676 Blast hits to 3671 proteins in 648 species: Archae - 0; Bacteria - 619; Metazoa - 80; Fungi - 341; Plants - 1990; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (gnl|cdd|36715 : 227.0) no description available & (p51110|dfra_vitvi : 107.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (reliability: 450.0) & (original description: Putative Sb01g028030, Description = Putative uncharacterized protein Sb01g028030, PFAM = PF01073)' T '16.2.1.7' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCR1' 'niben101scf04220_841925-847990' '(at1g15950 : 499.0) Encodes a cinnamoyl CoA reductase. Involved in lignin biosynthesis.; cinnamoyl coa reductase 1 (CCR1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: cinnamoyl coa reductase (TAIR:AT1G80820.1); Has 11995 Blast hits to 11983 proteins in 1896 species: Archae - 218; Bacteria - 5371; Metazoa - 416; Fungi - 931; Plants - 2539; Viruses - 54; Other Eukaryotes - 2466 (source: NCBI BLink). & (gnl|cdd|36715 : 418.0) no description available & (p51104|dfra_diaca : 238.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|30800 : 139.0) no description available & (reliability: 998.0) & (original description: Putative ccr, Description = Cinnamoyl-CoA reductase, PFAM = PF01370)' T '16.2.1.7' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCR1' 'niben101scf06349_221629-228509' '(at5g14700 : 313.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G23910.1); Has 4116 Blast hits to 4108 proteins in 752 species: Archae - 4; Bacteria - 797; Metazoa - 69; Fungi - 490; Plants - 1968; Viruses - 42; Other Eukaryotes - 746 (source: NCBI BLink). & (gnl|cdd|36715 : 223.0) no description available & (p51110|dfra_vitvi : 98.6) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (reliability: 626.0) & (original description: Putative CCR1, Description = Cinnamoyl-CoA reductase, PFAM = PF01073)' T '16.2.1.7' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCR1' 'niben101scf07995_11923-40025' '(at5g58490 : 511.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G02400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36715 : 367.0) no description available & (p51110|dfra_vitvi : 219.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (gnl|cdd|30800 : 122.0) no description available & (reliability: 1022.0) & (original description: Putative ccr, Description = Cinnamoyl-CoA reductase, PFAM = PF01370)' T '16.2.1.7' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCR1' 'niben101scf11232_116519-121502' '(at5g14700 : 238.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G23910.1); Has 4116 Blast hits to 4108 proteins in 752 species: Archae - 4; Bacteria - 797; Metazoa - 69; Fungi - 490; Plants - 1968; Viruses - 42; Other Eukaryotes - 746 (source: NCBI BLink). & (gnl|cdd|36715 : 213.0) no description available & (p51110|dfra_vitvi : 118.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (reliability: 476.0) & (original description: Putative CCR1, Description = Cinnamoyl-CoA reductase, PFAM = PF01073)' T '16.2.1.7' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CCR1' 'niben101scf15227_95039-99396' '(at2g23910 : 253.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G30470.1); Has 3676 Blast hits to 3671 proteins in 648 species: Archae - 0; Bacteria - 619; Metazoa - 80; Fungi - 341; Plants - 1990; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (gnl|cdd|36715 : 225.0) no description available & (p51110|dfra_vitvi : 115.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (reliability: 494.0) & (original description: Putative Sb01g028030, Description = Putative uncharacterized protein Sb01g028030, PFAM = PF01073)' T '16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'nbv0.3scaffold3920_36775-40994' '(gnl|cdd|35378 : 467.0) no description available & (q9sbq9|f3ph_pethy : 333.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (at3g48310 : 325.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily A, polypeptide 22" (CYP71A22); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 21 (TAIR:AT3G48320.1); Has 32713 Blast hits to 32486 proteins in 1636 species: Archae - 45; Bacteria - 3163; Metazoa - 11763; Fungi - 7101; Plants - 9557; Viruses - 3; Other Eukaryotes - 1081 (source: NCBI BLink). & (gnl|cdd|84486 : 312.0) no description available & (reliability: 636.0) & (original description: Putative cytochrome P450 CYP736C4, Description = Cytochrome P450 CYP736C4, PFAM = PF00067)' T '16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'nbv0.3scaffold12223_40338-44522' '(gnl|cdd|35378 : 477.0) no description available & (at5g07990 : 371.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (o81973|c93a3_soybn : 359.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 322.0) no description available & (reliability: 700.0) & (original description: Putative f3'h, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'niben044scf00007170ctg007_2156-7132' '(at4g36220 : 699.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (gnl|cdd|35378 : 453.0) no description available & (q42798|c93a1_soybn : 338.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|84486 : 283.0) no description available & (reliability: 1398.0) & (original description: Putative f5h, Description = Ferulate-5-hydroxylase, PFAM = PF00067)' T '16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'niben044scf00029569ctg003_14856-19075' '(gnl|cdd|35378 : 480.0) no description available & (q9sbq9|f3ph_pethy : 343.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (at5g57260 : 337.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 10" (CYP71B10); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32483 Blast hits to 32205 proteins in 1643 species: Archae - 48; Bacteria - 3002; Metazoa - 11999; Fungi - 6846; Plants - 9547; Viruses - 3; Other Eukaryotes - 1038 (source: NCBI BLink). & (gnl|cdd|84486 : 324.0) no description available & (reliability: 638.0) & (original description: Putative CYP9, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'niben101scf00072_271492-280631' '(gnl|cdd|35378 : 455.0) no description available & (p37117|c71a4_solme : 370.0) Cytochrome P450 71A4 (EC 1.14.-.-) (CYPLXXIA4) (P-450EG2) - Solanum melongena (Eggplant) (Aubergine) & (at4g36220 : 356.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (gnl|cdd|84486 : 293.0) no description available & (reliability: 712.0) & (original description: Putative CYP3, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'niben101scf00158_473433-478963' '(at4g36220 : 700.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (gnl|cdd|35378 : 452.0) no description available & (o81974|c71d8_soybn : 347.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|84486 : 284.0) no description available & (reliability: 1400.0) & (original description: Putative f5h, Description = Ferulate-5-hydroxylase, PFAM = PF00067)' T '16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'niben101scf00922_49304-52888' '(gnl|cdd|35378 : 490.0) no description available & (at4g36220 : 333.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (o81973|c93a3_soybn : 331.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 302.0) no description available & (reliability: 666.0) & (original description: Putative CYP9, Description = Cytochrome P450, PFAM = PF00067)' T '16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'niben101scf01001_115179-119542' '(o81974|c71d8_soybn : 512.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 473.0) no description available & (at3g26310 : 366.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 303.0) no description available & (reliability: 684.0) & (original description: Putative CYP71D55, Description = Premnaspirodiene oxygenase, PFAM = PF00067)' T '16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'niben101scf01065_834359-838956' '(gnl|cdd|35378 : 487.0) no description available & (at4g36220 : 322.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (p48418|c75a1_pethy : 321.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 309.0) no description available & (reliability: 644.0) & (original description: Putative CYP9, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'niben101scf01276_336438-339763' '(gnl|cdd|35378 : 248.0) no description available & (gnl|cdd|84486 : 199.0) no description available & (at2g45550 : 186.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 4" (CYP76C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 1 (TAIR:AT2G45560.1); Has 35109 Blast hits to 34843 proteins in 1784 species: Archae - 57; Bacteria - 4750; Metazoa - 11986; Fungi - 7467; Plants - 9491; Viruses - 6; Other Eukaryotes - 1352 (source: NCBI BLink). & (q42798|c93a1_soybn : 181.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 368.0) & (original description: Putative CYP9, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'niben101scf01276_573705-578113' '(gnl|cdd|35378 : 474.0) no description available & (at5g07990 : 364.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (o81973|c93a3_soybn : 354.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 319.0) no description available & (reliability: 684.0) & (original description: Putative f3'h, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'niben101scf01433_687388-711506' '(at4g36220 : 717.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (gnl|cdd|35378 : 450.0) no description available & (o81974|c71d8_soybn : 347.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|84486 : 290.0) no description available & (reliability: 1434.0) & (original description: Putative f5h, Description = Ferulate-5-hydroxylase, PFAM = PF00067)' T '16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'niben101scf04011_433992-437985' '(gnl|cdd|35378 : 483.0) no description available & (at4g36220 : 374.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (q9sbq9|f3ph_pethy : 344.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 311.0) no description available & (reliability: 748.0) & (original description: Putative f5h, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '16.2.1.8' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H' 'niben101scf10999_180566-185459' '(gnl|cdd|35378 : 468.0) no description available & (at5g07990 : 370.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (p48418|c75a1_pethy : 357.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 330.0) no description available & (reliability: 668.0) & (original description: Putative f3', Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'nbv0.3scaffold421_126746-129107' '(gnl|cdd|85101 : 144.0) no description available & (q8w013|comt1_catro : 129.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at5g54160 : 125.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3í-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3í-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38388 : 116.0) no description available & (reliability: 250.0) & (original description: Putative COMT2, Description = Caffeate O-methyltransferase, PFAM = PF00891)' T '16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'nbv0.3scaffold24477_2325-11206' '(gnl|cdd|85101 : 235.0) no description available & (o24529|7omt8_medsa : 177.0) Isoflavone-7-O-methyltransferase 8 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 8) (7-IOMT-8) - Medicago sativa (Alfalfa) & (gnl|cdd|38388 : 151.0) no description available & (at4g35160 : 114.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative oomtA, Description = O-methyltransferase, putative, PFAM = PF00891)' T '16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'niben044scf00003897ctg001_59000-65586' '(p28002|comt1_medsa : 410.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Medicago sativa (Alfalfa) & (at5g54160 : 392.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3í-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3í-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38388 : 347.0) no description available & (gnl|cdd|85101 : 316.0) no description available & (reliability: 784.0) & (original description: Putative comt, Description = Caffeic acid O-methyltransferase, PFAM = PF00891;PF08100)' T '16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'niben044scf00010384ctg022_6249-11676' '(p28002|comt1_medsa : 414.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Medicago sativa (Alfalfa) & (at5g54160 : 393.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3í-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3í-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38388 : 343.0) no description available & (gnl|cdd|85101 : 319.0) no description available & (reliability: 786.0) & (original description: Putative OMT1, Description = Caffeic acid 3-O-methyltransferase 1, PFAM = PF08100;PF00891)' T '16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'niben101scf00225_8544-13722' '(q9fqy8|comt1_capan : 669.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Capsicum annuum (Bell pepper) & (at5g54160 : 554.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3í-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3í-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38388 : 382.0) no description available & (gnl|cdd|85101 : 354.0) no description available & (reliability: 1108.0) & (original description: Putative COMT, Description = Caffeic acid 3-O-methyltransferase, PFAM = PF08100;PF00891)' T '16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'niben101scf00700_884926-897637' '(p28002|comt1_medsa : 414.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Medicago sativa (Alfalfa) & (at5g54160 : 392.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3í-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3í-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38388 : 348.0) no description available & (gnl|cdd|85101 : 317.0) no description available & (reliability: 784.0) & (original description: Putative comt, Description = Caffeic acid 3-O-methyltransferase, PFAM = PF08100;PF00891)' T '16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'niben101scf01184_1756068-1759203' '(gnl|cdd|85101 : 251.0) no description available & (o22308|7omt6_medsa : 205.0) Isoflavone-7-O-methyltransferase 6 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 6) (7-IOMT-6) - Medicago sativa (Alfalfa) & (gnl|cdd|38388 : 168.0) no description available & (at4g35160 : 128.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative oomtA, Description = O-methyltransferase, putative, PFAM = PF00891)' T '16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'niben101scf01239_223210-227817' '(q9fqy8|comt1_capan : 670.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Capsicum annuum (Bell pepper) & (at5g54160 : 553.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3í-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3í-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38388 : 386.0) no description available & (gnl|cdd|85101 : 356.0) no description available & (reliability: 1106.0) & (original description: Putative COMT, Description = Caffeic acid 3-O-methyltransferase, PFAM = PF00891;PF08100)' T '16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'niben101scf02026_190659-197776' '(p28002|comt1_medsa : 400.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Medicago sativa (Alfalfa) & (at5g54160 : 382.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3í-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3í-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38388 : 334.0) no description available & (gnl|cdd|85101 : 318.0) no description available & (reliability: 764.0) & (original description: Putative OMT, Description = Catechol O-methyltransferase, PFAM = PF08100;PF00891)' T '16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'niben101scf02073_71666-75201' '(o22308|7omt6_medsa : 270.0) Isoflavone-7-O-methyltransferase 6 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 6) (7-IOMT-6) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 235.0) no description available & (gnl|cdd|38388 : 173.0) no description available & (at4g35160 : 163.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative oomtA, Description = O-methyltransferase, putative, PFAM = PF08100;PF00891)' T '16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'niben101scf03085_755684-759388' '(o24529|7omt8_medsa : 337.0) Isoflavone-7-O-methyltransferase 8 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 8) (7-IOMT-8) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 273.0) no description available & (gnl|cdd|38388 : 212.0) no description available & (at4g35160 : 204.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative ROMT, Description = Trans-resveratrol di-O-methyltransferase, PFAM = PF00891;PF08100)' T '16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'niben101scf03265_25651-30863' '(q8w013|comt1_catro : 356.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at5g54160 : 330.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3í-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3í-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38388 : 315.0) no description available & (gnl|cdd|85101 : 273.0) no description available & (reliability: 660.0) & (original description: Putative FOMT6, Description = O-methyltransferase, PFAM = PF00891;PF08100)' T '16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'niben101scf05582_220320-224383' '(q8w013|comt1_catro : 402.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at5g54160 : 382.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3í-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3í-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38388 : 349.0) no description available & (gnl|cdd|85101 : 308.0) no description available & (reliability: 764.0) & (original description: Putative COMT1, Description = Caffeic acid 3-O-methyltransferase, PFAM = PF00891;PF08100)' T '16.2.1.9' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.COMT' 'niben101scf06105_475835-478970' '(o24529|7omt8_medsa : 186.0) Isoflavone-7-O-methyltransferase 8 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 8) (7-IOMT-8) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 154.0) no description available & (gnl|cdd|38388 : 125.0) no description available & (at4g35160 : 113.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative oomtA, Description = O-methyltransferase, putative, PFAM = PF00891;PF00891;PF08100)' T '16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'nbv0.3scaffold30802_550-4578' '(q9zrf1|mtdh_fraan : 516.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (gnl|cdd|35246 : 490.0) no description available & (at4g39330 : 439.0) cinnamyl alcohol dehydrogenase 9 (CAD9); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase homolog 3 (TAIR:AT2G21890.1); Has 37105 Blast hits to 37091 proteins in 3040 species: Archae - 773; Bacteria - 24856; Metazoa - 1252; Fungi - 2806; Plants - 2933; Viruses - 3; Other Eukaryotes - 4482 (source: NCBI BLink). & (gnl|cdd|31264 : 352.0) no description available & (reliability: 878.0) & (original description: Putative 10HGO, Description = 8-hydroxygeraniol dehydrogenase, PFAM = PF08240;PF00107)' T '16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'nbv0.3scaffold56063_6393-13112' '(gnl|cdd|35246 : 405.0) no description available & (q9zrf1|mtdh_fraan : 387.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (at4g37980 : 342.0) elicitor-activated gene 3-1 (ELI3-1); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to bacterium, plant-type hypersensitive response; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: elicitor-activated gene 3-2 (TAIR:AT4G37990.1); Has 38486 Blast hits to 38464 proteins in 3055 species: Archae - 808; Bacteria - 25722; Metazoa - 1237; Fungi - 2883; Plants - 3069; Viruses - 3; Other Eukaryotes - 4764 (source: NCBI BLink). & (gnl|cdd|31264 : 307.0) no description available & (reliability: 684.0) & (original description: Putative cad1, Description = Cinnamyl alcohol dehydrogenase-like protein, PFAM = PF08240)' T '16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'nbv0.5scaffold430_150011-521288' '(q9zrf1|mtdh_fraan : 514.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (gnl|cdd|35246 : 475.0) no description available & (at4g39330 : 432.0) cinnamyl alcohol dehydrogenase 9 (CAD9); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase homolog 3 (TAIR:AT2G21890.1); Has 37105 Blast hits to 37091 proteins in 3040 species: Archae - 773; Bacteria - 24856; Metazoa - 1252; Fungi - 2806; Plants - 2933; Viruses - 3; Other Eukaryotes - 4482 (source: NCBI BLink). & (gnl|cdd|31264 : 336.0) no description available & (reliability: 864.0) & (original description: Putative cad6, Description = Cinnamyl alcohol dehydrogenase 6, PFAM = PF08240;PF00107)' T '16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'nbv0.5scaffold430_761005-767573' '(gnl|cdd|35246 : 464.0) no description available & (q9zrf1|mtdh_fraan : 451.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (at4g39330 : 405.0) cinnamyl alcohol dehydrogenase 9 (CAD9); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase homolog 3 (TAIR:AT2G21890.1); Has 37105 Blast hits to 37091 proteins in 3040 species: Archae - 773; Bacteria - 24856; Metazoa - 1252; Fungi - 2806; Plants - 2933; Viruses - 3; Other Eukaryotes - 4482 (source: NCBI BLink). & (gnl|cdd|31264 : 339.0) no description available & (reliability: 810.0) & (original description: Putative cad1, Description = Cinnamyl alcohol dehydrogenase-like protein, PFAM = PF00107;PF08240)' T '16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben044scf00000692ctg018_1678-6188' '(gnl|cdd|35246 : 374.0) no description available & (q9zrf1|mtdh_fraan : 303.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (gnl|cdd|31264 : 274.0) no description available & (at4g37980 : 259.0) elicitor-activated gene 3-1 (ELI3-1); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to bacterium, plant-type hypersensitive response; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: elicitor-activated gene 3-2 (TAIR:AT4G37990.1); Has 38486 Blast hits to 38464 proteins in 3055 species: Archae - 808; Bacteria - 25722; Metazoa - 1237; Fungi - 2883; Plants - 3069; Viruses - 3; Other Eukaryotes - 4764 (source: NCBI BLink). & (reliability: 518.0) & (original description: Putative MTD1, Description = Putative mannitol dehydrogenase 1, PFAM = PF00107;PF08240)' T '16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben044scf00003450ctg005_11984-16168' '(gnl|cdd|35246 : 486.0) no description available & (q9zrf1|mtdh_fraan : 474.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (at4g39330 : 392.0) cinnamyl alcohol dehydrogenase 9 (CAD9); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase homolog 3 (TAIR:AT2G21890.1); Has 37105 Blast hits to 37091 proteins in 3040 species: Archae - 773; Bacteria - 24856; Metazoa - 1252; Fungi - 2806; Plants - 2933; Viruses - 3; Other Eukaryotes - 4482 (source: NCBI BLink). & (gnl|cdd|31264 : 345.0) no description available & (reliability: 784.0) & (original description: Putative CAD, Description = Probable mannitol dehydrogenase, PFAM = PF08240;PF00107)' T '16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben044scf00060119ctg000_17642-22002' '(q9zrf1|mtdh_fraan : 511.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (gnl|cdd|35246 : 470.0) no description available & (at4g37980 : 427.0) elicitor-activated gene 3-1 (ELI3-1); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to bacterium, plant-type hypersensitive response; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: elicitor-activated gene 3-2 (TAIR:AT4G37990.1); Has 38486 Blast hits to 38464 proteins in 3055 species: Archae - 808; Bacteria - 25722; Metazoa - 1237; Fungi - 2883; Plants - 3069; Viruses - 3; Other Eukaryotes - 4764 (source: NCBI BLink). & (gnl|cdd|31264 : 330.0) no description available & (reliability: 854.0) & (original description: Putative cad6, Description = Cinnamyl alcohol dehydrogenase 6, PFAM = PF00107;PF08240)' T '16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben101scf00942_29360-33470' '(gnl|cdd|35246 : 485.0) no description available & (q9zrf1|mtdh_fraan : 473.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (at4g39330 : 389.0) cinnamyl alcohol dehydrogenase 9 (CAD9); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase homolog 3 (TAIR:AT2G21890.1); Has 37105 Blast hits to 37091 proteins in 3040 species: Archae - 773; Bacteria - 24856; Metazoa - 1252; Fungi - 2806; Plants - 2933; Viruses - 3; Other Eukaryotes - 4482 (source: NCBI BLink). & (gnl|cdd|31264 : 348.0) no description available & (reliability: 778.0) & (original description: Putative cad6, Description = Cinnamyl alcohol dehydrogenase 6, PFAM = PF08240;PF00107)' T '16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben101scf01313_2354-9569' '(gnl|cdd|35246 : 471.0) no description available & (q9zrf1|mtdh_fraan : 461.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (at4g39330 : 412.0) cinnamyl alcohol dehydrogenase 9 (CAD9); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase homolog 3 (TAIR:AT2G21890.1); Has 37105 Blast hits to 37091 proteins in 3040 species: Archae - 773; Bacteria - 24856; Metazoa - 1252; Fungi - 2806; Plants - 2933; Viruses - 3; Other Eukaryotes - 4482 (source: NCBI BLink). & (gnl|cdd|31264 : 346.0) no description available & (reliability: 824.0) & (original description: Putative cad1, Description = Cinnamyl alcohol dehydrogenase-like protein, PFAM = PF08240;PF00107)' T '16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben101scf02907_407589-411956' '(q9zrf1|mtdh_fraan : 483.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (gnl|cdd|35246 : 445.0) no description available & (at4g37980 : 402.0) elicitor-activated gene 3-1 (ELI3-1); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to bacterium, plant-type hypersensitive response; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: elicitor-activated gene 3-2 (TAIR:AT4G37990.1); Has 38486 Blast hits to 38464 proteins in 3055 species: Archae - 808; Bacteria - 25722; Metazoa - 1237; Fungi - 2883; Plants - 3069; Viruses - 3; Other Eukaryotes - 4764 (source: NCBI BLink). & (gnl|cdd|31264 : 305.0) no description available & (reliability: 804.0) & (original description: Putative cad5, Description = Cinnamyl alcohol dehydrogenase 5, PFAM = PF00107;PF08240)' T '16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben101scf02907_635297-640329' '(q9zrf1|mtdh_fraan : 533.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (gnl|cdd|35246 : 493.0) no description available & (at4g37970 : 456.0) cinnamyl alcohol dehydrogenase 6 (CAD6); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase 9 (TAIR:AT4G39330.1); Has 35385 Blast hits to 35371 proteins in 2946 species: Archae - 789; Bacteria - 23408; Metazoa - 1218; Fungi - 2700; Plants - 2633; Viruses - 3; Other Eukaryotes - 4634 (source: NCBI BLink). & (gnl|cdd|31264 : 337.0) no description available & (reliability: 912.0) & (original description: Putative cad6, Description = Cinnamyl alcohol dehydrogenase 6, PFAM = PF00107;PF08240)' T '16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben101scf03410_62656-72706' '(at4g39330 : 375.0) cinnamyl alcohol dehydrogenase 9 (CAD9); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase homolog 3 (TAIR:AT2G21890.1); Has 37105 Blast hits to 37091 proteins in 3040 species: Archae - 773; Bacteria - 24856; Metazoa - 1252; Fungi - 2806; Plants - 2933; Viruses - 3; Other Eukaryotes - 4482 (source: NCBI BLink). & (o82515|mtdh_medsa : 354.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Medicago sativa (Alfalfa) & (gnl|cdd|35246 : 343.0) no description available & (gnl|cdd|31264 : 241.0) no description available & (reliability: 750.0) & (original description: Putative cad1, Description = Putative sinapyl alcohol dehydrogenase, PFAM = PF08240;PF00107)' T '16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben101scf04906_137102-143031' '(gnl|cdd|35246 : 460.0) no description available & (q9zrf1|mtdh_fraan : 457.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (at4g37980 : 402.0) elicitor-activated gene 3-1 (ELI3-1); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to bacterium, plant-type hypersensitive response; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: elicitor-activated gene 3-2 (TAIR:AT4G37990.1); Has 38486 Blast hits to 38464 proteins in 3055 species: Archae - 808; Bacteria - 25722; Metazoa - 1237; Fungi - 2883; Plants - 3069; Viruses - 3; Other Eukaryotes - 4764 (source: NCBI BLink). & (gnl|cdd|31264 : 337.0) no description available & (reliability: 804.0) & (original description: Putative GEDH1, Description = Geraniol dehydrogenase 1, PFAM = PF08240;PF00107)' T '16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben101scf05245_238126-242298' '(gnl|cdd|35246 : 439.0) no description available & (at4g39330 : 403.0) cinnamyl alcohol dehydrogenase 9 (CAD9); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase homolog 3 (TAIR:AT2G21890.1); Has 37105 Blast hits to 37091 proteins in 3040 species: Archae - 773; Bacteria - 24856; Metazoa - 1252; Fungi - 2806; Plants - 2933; Viruses - 3; Other Eukaryotes - 4482 (source: NCBI BLink). & (q9zrf1|mtdh_fraan : 398.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (gnl|cdd|31264 : 351.0) no description available & (reliability: 806.0) & (original description: Putative cad3, Description = Cinnamyl alcohol dehydrogenase 3, PFAM = PF08240;PF00107)' T '16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben101scf07488_60390-74843' '(gnl|cdd|35246 : 443.0) no description available & (at4g39330 : 424.0) cinnamyl alcohol dehydrogenase 9 (CAD9); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase homolog 3 (TAIR:AT2G21890.1); Has 37105 Blast hits to 37091 proteins in 3040 species: Archae - 773; Bacteria - 24856; Metazoa - 1252; Fungi - 2806; Plants - 2933; Viruses - 3; Other Eukaryotes - 4482 (source: NCBI BLink). & (q9zrf1|mtdh_fraan : 403.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (gnl|cdd|31264 : 361.0) no description available & (reliability: 848.0) & (original description: Putative cad3, Description = Cinnamyl alcohol dehydrogenase 3, PFAM = PF00107;PF08240)' T '16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben101scf08134_168580-175837' '(p30360|cadh9_tobac : 628.0) Cinnamyl alcohol dehydrogenase (EC 1.1.1.195) (CAD) - Nicotiana tabacum (Common tobacco) & (at3g19450 : 502.0) Encodes a catalytically active cinnamyl alcohol dehydrogenase which uses p-coumaryl aldehyde as a preferred substrate. It can also use caffeyl, coniferyl and d-hydroxyconiferyl aldehydes as substrates.; ATCAD4; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase 5 (TAIR:AT4G34230.1); Has 40533 Blast hits to 40509 proteins in 3018 species: Archae - 756; Bacteria - 27152; Metazoa - 1406; Fungi - 3053; Plants - 2651; Viruses - 3; Other Eukaryotes - 5512 (source: NCBI BLink). & (gnl|cdd|35246 : 472.0) no description available & (gnl|cdd|31264 : 326.0) no description available & (reliability: 1004.0) & (original description: Putative CAD14, Description = Probable cinnamyl alcohol dehydrogenase 1, PFAM = PF08240;PF00107)' T '16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben101scf11785_215413-219299' '(p30359|cadh4_tobac : 560.0) Cinnamyl alcohol dehydrogenase (EC 1.1.1.195) (CAD) - Nicotiana tabacum (Common tobacco) & (at3g19450 : 513.0) Encodes a catalytically active cinnamyl alcohol dehydrogenase which uses p-coumaryl aldehyde as a preferred substrate. It can also use caffeyl, coniferyl and d-hydroxyconiferyl aldehydes as substrates.; ATCAD4; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase 5 (TAIR:AT4G34230.1); Has 40533 Blast hits to 40509 proteins in 3018 species: Archae - 756; Bacteria - 27152; Metazoa - 1406; Fungi - 3053; Plants - 2651; Viruses - 3; Other Eukaryotes - 5512 (source: NCBI BLink). & (gnl|cdd|35246 : 475.0) no description available & (gnl|cdd|31264 : 326.0) no description available & (reliability: 1026.0) & (original description: Putative CAD1, Description = Cinnamyl alcohol dehydrogenase 1, PFAM = PF00107;PF08240)' T '16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'niben101scf15792_149277-153075' '(at1g72680 : 531.0) cinnamyl-alcohol dehydrogenase (CAD1); FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, zinc ion binding, cofactor binding; INVOLVED IN: lignin biosynthetic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase homolog 3 (TAIR:AT2G21890.1); Has 36986 Blast hits to 36967 proteins in 3073 species: Archae - 711; Bacteria - 24167; Metazoa - 1364; Fungi - 2774; Plants - 3348; Viruses - 3; Other Eukaryotes - 4619 (source: NCBI BLink). & (gnl|cdd|35246 : 437.0) no description available & (o82035|cadh2_picab : 345.0) Cinnamyl alcohol dehydrogenase 2 (EC 1.1.1.195) (CAD 2) - Picea abies (Norway spruce) (Picea excelsa) & (gnl|cdd|31264 : 341.0) no description available & (reliability: 1062.0) & (original description: Putative cad2, Description = Cinnamyl-alcohol dehydrogenase 2, PFAM = PF00107;PF08240)' T '16.2.1.1001' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'trans-cinnamate' 'secondary metabolism, phenylpropanoids' M '16.2.1.1002' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' '4-coumarate' 'secondary metabolism, phenylpropanoids' M '16.2.1.1003' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' '4-coumaryl aldehyde' 'secondary metabolism, phenylpropanoids' M '16.2.1.1004' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' '4-coumaryl alcohol' 'secondary metabolism, phenylpropanoids' M '16.2.1.1007' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'coniferyl alcohol' 'secondary metabolism' M '16.2.1.1008' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'coniferyl aldehyde' 'secondary metabolism' M '16.2.1.1010' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'sinapyl alcohol' 'secondary metabolism, phenylpropanoids (lignin biosynthesis)' M '16.2.1.1011' 'secondary metabolism.phenylpropanoids.lignin biosynthesis' 'sinapinaldehyde' 'secondary metabolism, phenylpropanoids (lignin biosynthesis)' M '16.2.99' 'secondary metabolism.phenylpropanoids.unspecified' '' '' '16.2.99.1001' 'secondary metabolism.phenylpropanoids.unspecified' '3-dehydroquinate' 'secondary metabolism, phenylpropanoids' M '16.2.99.1002' 'secondary metabolism.phenylpropanoids.unspecified' '2,5-dimethoxycinnamate' 'secondary metabolism, phenylpropanoids' M '16.2.99.1003' 'secondary metabolism.phenylpropanoids.unspecified' 'trans-3,5-dimethoxy-4-hydroxycinnamaldehyde' 'secondary metabolism, phenylpropanoids' M '16.2.99.1005' 'secondary metabolism.phenylpropanoids.unspecified' 'n-cinnamoylglycine' 'secondary metabolism, phenylpropanoids' M '16.2.99.1006' 'secondary metabolism.phenylpropanoids.unspecified' 'coumarine' 'secondary metabolism, phenylpropanoids' M '16.2.99.1007' 'secondary metabolism.phenylpropanoids.unspecified' '5-caffeoylquinate' 'secondary metabolism, phenylpropanoids' M '16.2.99.1008' 'secondary metabolism.phenylpropanoids.unspecified' '4-methoxycinnamate' 'secondary metabolism, phenylpropanoids' M '16.2.99.1009' 'secondary metabolism.phenylpropanoids.unspecified' '4-hydroxy-3-methoxycinnamaldehyde' 'secondary metabolism, phenylpropanoids' M '16.2.99.1011' 'secondary metabolism.phenylpropanoids.unspecified' '4-caffeoylquinate' 'secondary metabolism, phenylpropanoids' M '16.2.99.1012' 'secondary metabolism.phenylpropanoids.unspecified' '4-aminocinnamate' 'secondary metabolism, phenylpropanoids' M '16.2.99.1013' 'secondary metabolism.phenylpropanoids.unspecified' '3-hydroxycinnamate' 'secondary metabolism, phenylpropanoids' M '16.2.99.1014' 'secondary metabolism.phenylpropanoids.unspecified' '3-methoxycinnamate' 'secondary metabolism, phenylpropanoids' M '16.2.99.1015' 'secondary metabolism.phenylpropanoids.unspecified' '3,4-dihydroxyhydrocinnamate' 'secondary metabolism, phenylpropanoids' M '16.2.99.1016' 'secondary metabolism.phenylpropanoids.unspecified' '3,4-dimethoxycinnamate' 'secondary metabolism, phenylpropanoids' M '16.2.99.1017' 'secondary metabolism.phenylpropanoids.unspecified' '3,5-dimethoxycinnamate' 'secondary metabolism, phenylpropanoids' M '16.2.99.1018' 'secondary metabolism.phenylpropanoids.unspecified' '3,4,5-trimethoxycinnamate' 'secondary metabolism, phenylpropanoids' M '16.2.99.1019' 'secondary metabolism.phenylpropanoids.unspecified' '2-hydroxycinnamate' 'secondary metabolism, phenylpropanoids' M '16.2.99.1020' 'secondary metabolism.phenylpropanoids.unspecified' '2-methoxycinnamate' 'secondary metabolism, phenylpropanoids' M '16.2.99.1021' 'secondary metabolism.phenylpropanoids.unspecified' '2-coumarate' 'secondary metabolism, phenylpropanoids (ligning biosynthesis)' M '16.2.99.1022' 'secondary metabolism.phenylpropanoids.unspecified' 'benzoate' 'secondary metabolism, phenylpropanoids (ligning biosynthesis)' M '16.2.99.1023' 'secondary metabolism.phenylpropanoids.unspecified' 'caffeate' 'secondary metabolism, phenylpropanoids (lignin biosynthesis)' M '16.2.99.1024' 'secondary metabolism.phenylpropanoids.unspecified' 'chlorogenate' 'secondary metabolism, phenylpropanoids' M '16.2.99.1025' 'secondary metabolism.phenylpropanoids.unspecified' 'cinnamate' 'secondary metabolism, phenylpropanoids (lignin biosynthesis)' M '16.2.99.1026' 'secondary metabolism.phenylpropanoids.unspecified' 'ferulate' 'secondary metabolism, phenylpropanoids (lignin biosyntehesis)' M '16.2.99.1027' 'secondary metabolism.phenylpropanoids.unspecified' 'kaempferol-3-o-rutinoside' 'secondary metabolism, phenylpropanoids' M '16.2.99.1028' 'secondary metabolism.phenylpropanoids.unspecified' 'naringenin' 'secondary metabolism, phenylpropanoids' M '16.2.99.1029' 'secondary metabolism.phenylpropanoids.unspecified' 'rutin' 'secondary metabolism, phenylpropanoids' M '16.2.99.1030' 'secondary metabolism.phenylpropanoids.unspecified' 'salicylate' 'secondary metabolism, phenylpropanoids' M '16.2.99.1031' 'secondary metabolism.phenylpropanoids.unspecified' 'sinapinate' 'secondary metabolism, phenylpropanoids (lignin biosynthesis)' M '16.2.99.1032' 'secondary metabolism.phenylpropanoids.unspecified' 'chavicol' 'p-allylphenol' M '16.2.99.1033' 'secondary metabolism.phenylpropanoids.unspecified' 'methyl-chavicol' 'Estragole, or p-allylanisole' M '16.2.99.1034' 'secondary metabolism.phenylpropanoids.unspecified' 'eugenol' '2-methoxy-4-(2-propenyl)phenol' M '16.2.99.1035' 'secondary metabolism.phenylpropanoids.unspecified' 'methyl-eugenol' '' M '16.2.99.1036' 'secondary metabolism.phenylpropanoids.unspecified' 'dihydro 4-coumaryl alcohol' '' M '16.2.99.1037' 'secondary metabolism.phenylpropanoids.unspecified' 'dihydro coniferyl alcohol' '' M '16.2.99.1038' 'secondary metabolism.phenylpropanoids.unspecified' 'alpha-hydroxyphenylpropionate' '' M '16.2.99.1039' 'secondary metabolism.phenylpropanoids.unspecified' 'acetophenone' '' M '16.2.99.1040' 'secondary metabolism.phenylpropanoids.unspecified' 'benzaldehyde' '' M '16.2.99.1041' 'secondary metabolism.phenylpropanoids.unspecified' 'benzylalcohol' '' M '16.2.99.1042' 'secondary metabolism.phenylpropanoids.unspecified' 'cinnamaldehyde' '' M '16.2.99.1043' 'secondary metabolism.phenylpropanoids.unspecified' 'phenylacetate' '' M '16.2.99.1044' 'secondary metabolism.phenylpropanoids.unspecified' 'mandelic acid' '' M '16.2.99.1045' 'secondary metabolism.phenylpropanoids.unspecified' 'benzoylformic acid' '' M '16.2.99.1046' 'secondary metabolism.phenylpropanoids.unspecified' 'beta-hydroxyphenylpropionate' '' M '16.2.99.1047' 'secondary metabolism.phenylpropanoids.unspecified' 'beta-oxophenylpropionate' '' M '16.2.99.1048' 'secondary metabolism.phenylpropanoids.unspecified' 'phenylethanol' '' M '16.2.99.1051' 'secondary metabolism.phenylpropanoids.unspecified' '3-caffeoylquinate' '' M '16.3' 'secondary metabolism.shikimate pathway' '' '' '16.4' 'secondary metabolism.N misc' '' '' '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'nbv0.3scaffold17248_212-5801' '(at2g29260 : 171.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G06060.1); Has 125944 Blast hits to 125708 proteins in 3633 species: Archae - 994; Bacteria - 82126; Metazoa - 5739; Fungi - 6481; Plants - 2838; Viruses - 5; Other Eukaryotes - 27761 (source: NCBI BLink). & (gnl|cdd|77008 : 145.0) no description available & (gnl|cdd|35944 : 137.0) no description available & (reliability: 324.0) & (original description: Putative tr, Description = Tropinone reductase I, PFAM = PF13561)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'nbv0.3scaffold35632_12519-19220' '(at1g35190 : 469.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction, alkaloid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G46490.1); Has 8500 Blast hits to 8467 proteins in 983 species: Archae - 0; Bacteria - 1153; Metazoa - 122; Fungi - 1092; Plants - 4450; Viruses - 0; Other Eukaryotes - 1683 (source: NCBI BLink). & (gnl|cdd|33294 : 249.0) no description available & (gnl|cdd|35365 : 245.0) no description available & (q07353|fl3h_pethy : 93.6) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) (Fragment) - Petunia hybrida (Petunia) & (reliability: 938.0) & (original description: Putative efe, Description = 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, PFAM = PF14226;PF03171)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'nbv0.3scaffold47230_23-16237' '(at2g20340 : 751.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity, tyrosine decarboxylase activity; INVOLVED IN: response to wounding, cellular amino acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aromatic-L-amino-acid decarboxylase (InterPro:IPR010977), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal-phosphate binding site (InterPro:IPR021115), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: L-tyrosine decarboxylase (TAIR:AT4G28680.1); Has 5452 Blast hits to 5431 proteins in 1792 species: Archae - 99; Bacteria - 1888; Metazoa - 2300; Fungi - 264; Plants - 262; Viruses - 5; Other Eukaryotes - 634 (source: NCBI BLink). & (q7xhl3|tydc1_orysa : 743.0) Tyrosine decarboxylase 1 (EC 4.1.1.25) - Oryza sativa (Rice) & (gnl|cdd|35847 : 636.0) no description available & (gnl|cdd|84666 : 474.0) no description available & (reliability: 1502.0) & (original description: Putative ELI5, Description = Tyrosine decarboxylase 1, PFAM = PF00282)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'nbv0.3scaffold56158_1-6065' '(at1g08470 : 297.0) Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.; strictosidine synthase-like 3 (SSL3); FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1252 Blast hits to 1238 proteins in 269 species: Archae - 3; Bacteria - 366; Metazoa - 225; Fungi - 17; Plants - 480; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (gnl|cdd|36733 : 178.0) no description available & (reliability: 594.0) & (original description: Putative LAP3, Description = Strictosidine synthase family protein, PFAM = )' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'nbv0.3scaffold68423_5038-8702' '(at4g20840 : 609.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: apoplast, plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT4G20830.2); Has 4588 Blast hits to 4445 proteins in 696 species: Archae - 38; Bacteria - 1910; Metazoa - 4; Fungi - 1681; Plants - 781; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (gnl|cdd|85533 : 107.0) no description available & (reliability: 1150.0) & (original description: Putative BBE1, Description = Berberine bridge enzyme, PFAM = PF08031;PF01565)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'nbv0.3scaffold102929_905-3688' '(at3g57030 : 398.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1145 Blast hits to 1130 proteins in 241 species: Archae - 1; Bacteria - 292; Metazoa - 224; Fungi - 14; Plants - 486; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|36733 : 353.0) no description available & (p18417|stsy_catro : 150.0) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|66743 : 121.0) no description available & (reliability: 796.0) & (original description: Putative BnaA10g14270D, Description = BnaA10g14270D protein, PFAM = PF03088)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'nbv0.5scaffold97_1020366-1030729' '(at3g57030 : 114.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1145 Blast hits to 1130 proteins in 241 species: Archae - 1; Bacteria - 292; Metazoa - 224; Fungi - 14; Plants - 486; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|36733 : 111.0) no description available & (p18417|stsy_catro : 106.0) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 228.0) & (original description: Putative SS6, Description = Strictosidine synthase 1, PFAM = )' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'nbv0.5scaffold457_284347-295186' '(at5g06060 : 279.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35944 : 194.0) no description available & (gnl|cdd|77008 : 194.0) no description available & (q75kh3|grdh_orysa : 85.9) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 540.0) & (original description: Putative tr, Description = NAD(P)-binding rossmann-fold protein, PFAM = PF00106;PF13561)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'nbv0.5scaffold1183_318567-322568' '(at3g59530 : 591.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, pollen exine formation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36733 : 390.0) no description available & (p18417|stsy_catro : 160.0) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|66743 : 102.0) no description available & (reliability: 1182.0) & (original description: Putative SSL13, Description = Protein STRICTOSIDINE SYNTHASE-LIKE 13, PFAM = PF03088)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'nbv0.5scaffold3358_5761-9741' '(at5g06060 : 326.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|77008 : 247.0) no description available & (gnl|cdd|35944 : 217.0) no description available & (q75kh3|grdh_orysa : 99.4) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 594.0) & (original description: Putative trI, Description = Tropinone reductase, PFAM = PF13561)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben044scf00022939ctg000_7011-8942' '(at1g08470 : 164.0) Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.; strictosidine synthase-like 3 (SSL3); FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1252 Blast hits to 1238 proteins in 269 species: Archae - 3; Bacteria - 366; Metazoa - 225; Fungi - 17; Plants - 480; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative SS9, Description = Strictosidine synthase family protein, PFAM = )' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben044scf00026899ctg001_1390-3888' '(at3g51420 : 142.0) Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.; strictosidine synthase-like 4 (SSL4); FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT3G51430.1); Has 1288 Blast hits to 1275 proteins in 300 species: Archae - 9; Bacteria - 428; Metazoa - 223; Fungi - 4; Plants - 454; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|36733 : 87.7) no description available & (reliability: 284.0) & (original description: Putative SSL4, Description = Strictosidine synthase family protein, PFAM = )' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben044scf00033342ctg009_3001-5329' '(at1g08470 : 163.0) Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.; strictosidine synthase-like 3 (SSL3); FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1252 Blast hits to 1238 proteins in 269 species: Archae - 3; Bacteria - 366; Metazoa - 225; Fungi - 17; Plants - 480; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative SS9, Description = Strictosidine synthase family protein, PFAM = )' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben044scf00034511ctg010_959-3402' '(gnl|cdd|36733 : 288.0) no description available & (at3g57030 : 221.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1145 Blast hits to 1130 proteins in 241 species: Archae - 1; Bacteria - 292; Metazoa - 224; Fungi - 14; Plants - 486; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|66743 : 108.0) no description available & (p18417|stsy_catro : 90.9) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 442.0) & (original description: Putative LAP3, Description = Strictosidine synthase family protein, PFAM = PF03088)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben044scf00046222ctg001_1-4690' '(at3g46500 : 264.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G46490.1); Has 7979 Blast hits to 7962 proteins in 970 species: Archae - 0; Bacteria - 1125; Metazoa - 119; Fungi - 1055; Plants - 4286; Viruses - 0; Other Eukaryotes - 1394 (source: NCBI BLink). & (gnl|cdd|33294 : 145.0) no description available & (gnl|cdd|35365 : 144.0) no description available & (reliability: 512.0) & (original description: Putative At1g35190, Description = 2OG-Fe(II) oxygenase family oxidoreductase, PFAM = PF03171)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf00907_47035-63447' '(gnl|cdd|36733 : 347.0) no description available & (at2g41290 : 306.0) Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.; strictosidine synthase-like 2 (SSL2); FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT3G57030.1); Has 1076 Blast hits to 1064 proteins in 215 species: Archae - 3; Bacteria - 245; Metazoa - 227; Fungi - 12; Plants - 478; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (p18417|stsy_catro : 138.0) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|66743 : 109.0) no description available & (reliability: 612.0) & (original description: Putative SSL2, Description = Protein STRICTOSIDINE SYNTHASE-LIKE 2, PFAM = PF03088)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf01274_336268-349226' '(gnl|cdd|36733 : 335.0) no description available & (at2g41290 : 292.0) Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.; strictosidine synthase-like 2 (SSL2); FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT3G57030.1); Has 1076 Blast hits to 1064 proteins in 215 species: Archae - 3; Bacteria - 245; Metazoa - 227; Fungi - 12; Plants - 478; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (p18417|stsy_catro : 121.0) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|66743 : 106.0) no description available & (reliability: 584.0) & (original description: Putative SS10, Description = Strictosidine synthase family protein, PFAM = PF03088)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf01274_359609-364350' '(at3g57030 : 453.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1145 Blast hits to 1130 proteins in 241 species: Archae - 1; Bacteria - 292; Metazoa - 224; Fungi - 14; Plants - 486; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|36733 : 388.0) no description available & (p18417|stsy_catro : 159.0) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|66743 : 128.0) no description available & (reliability: 906.0) & (original description: Putative SSL10, Description = Protein STRICTOSIDINE SYNTHASE-LIKE 10, PFAM = PF03088)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf01281_6431-16087' '(at4g20840 : 613.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: apoplast, plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT4G20830.2); Has 4588 Blast hits to 4445 proteins in 696 species: Archae - 38; Bacteria - 1910; Metazoa - 4; Fungi - 1681; Plants - 781; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (gnl|cdd|85533 : 105.0) no description available & (reliability: 1158.0) & (original description: Putative At4g20830, Description = Reticuline oxidase-like protein, PFAM = PF01565;PF08031)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf01395_294148-297743' '(at1g30700 : 581.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: stem, hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT1G30710.1); Has 4734 Blast hits to 4686 proteins in 819 species: Archae - 47; Bacteria - 2248; Metazoa - 0; Fungi - 1602; Plants - 666; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|85533 : 101.0) no description available & (reliability: 1050.0) & (original description: Putative BBE1, Description = Reticuline oxidase-like protein, PFAM = PF01565;PF08031)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf01748_376506-379671' '(at1g30700 : 389.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: stem, hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT1G30710.1); Has 4734 Blast hits to 4686 proteins in 819 species: Archae - 47; Bacteria - 2248; Metazoa - 0; Fungi - 1602; Plants - 666; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|85533 : 91.4) no description available & (reliability: 716.0) & (original description: Putative BBE1, Description = Reticuline oxidase-like protein, PFAM = PF01565)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf02271_443498-447021' '(p17770|ddc_catro : 753.0) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC) (DOPA decarboxylase) (Tryptophan decarboxylase) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at2g20340 : 585.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity, tyrosine decarboxylase activity; INVOLVED IN: response to wounding, cellular amino acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aromatic-L-amino-acid decarboxylase (InterPro:IPR010977), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal-phosphate binding site (InterPro:IPR021115), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: L-tyrosine decarboxylase (TAIR:AT4G28680.1); Has 5452 Blast hits to 5431 proteins in 1792 species: Archae - 99; Bacteria - 1888; Metazoa - 2300; Fungi - 264; Plants - 262; Viruses - 5; Other Eukaryotes - 634 (source: NCBI BLink). & (gnl|cdd|35847 : 562.0) no description available & (gnl|cdd|84666 : 496.0) no description available & (reliability: 1170.0) & (original description: Putative tdc1, Description = Tryptophan decarboxylase, PFAM = PF00282)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf02310_403621-412493' '(at1g08470 : 620.0) Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.; strictosidine synthase-like 3 (SSL3); FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1252 Blast hits to 1238 proteins in 269 species: Archae - 3; Bacteria - 366; Metazoa - 225; Fungi - 17; Plants - 480; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (gnl|cdd|36733 : 412.0) no description available & (p18417|stsy_catro : 153.0) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|66743 : 113.0) no description available & (reliability: 1240.0) & (original description: Putative SSL3, Description = Protein STRICTOSIDINE SYNTHASE-LIKE 3, PFAM = PF03088)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf02460_259668-267223' '(gnl|cdd|36733 : 217.0) no description available & (at3g51430 : 175.0) Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.; YELLOW-LEAF-SPECIFIC GENE 2 (YLS2); CONTAINS InterPro DOMAIN/s: Strictosidine synthase (InterPro:IPR004141), Strictosidine synthase, conserved region (InterPro:IPR018119), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT3G51440.1). & (gnl|cdd|66743 : 91.9) no description available & (reliability: 350.0) & (original description: Putative glysoja_026180, Description = Adipocyte plasma membrane-associated protein, PFAM = PF03088)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf02632_335427-346378' '(at3g57030 : 114.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1145 Blast hits to 1130 proteins in 241 species: Archae - 1; Bacteria - 292; Metazoa - 224; Fungi - 14; Plants - 486; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|36733 : 111.0) no description available & (p18417|stsy_catro : 105.0) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 228.0) & (original description: Putative SS6, Description = Strictosidine synthase family protein, PFAM = )' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf02857_228549-232048' '(q06088|tydc4_petcr : 725.0) Tyrosine decarboxylase 4 (EC 4.1.1.25) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at2g20340 : 606.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity, tyrosine decarboxylase activity; INVOLVED IN: response to wounding, cellular amino acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aromatic-L-amino-acid decarboxylase (InterPro:IPR010977), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal-phosphate binding site (InterPro:IPR021115), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: L-tyrosine decarboxylase (TAIR:AT4G28680.1); Has 5452 Blast hits to 5431 proteins in 1792 species: Archae - 99; Bacteria - 1888; Metazoa - 2300; Fungi - 264; Plants - 262; Viruses - 5; Other Eukaryotes - 634 (source: NCBI BLink). & (gnl|cdd|35847 : 553.0) no description available & (gnl|cdd|84666 : 475.0) no description available & (reliability: 1212.0) & (original description: Putative TYDC5, Description = Tyrosine/DOPA decarboxylase 5, PFAM = PF00282)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf02877_259542-270142' '(at3g57030 : 417.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1145 Blast hits to 1130 proteins in 241 species: Archae - 1; Bacteria - 292; Metazoa - 224; Fungi - 14; Plants - 486; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|36733 : 339.0) no description available & (p18417|stsy_catro : 171.0) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|66743 : 126.0) no description available & (reliability: 834.0) & (original description: Putative Sb10g023490, Description = Putative uncharacterized protein Sb10g023490, PFAM = PF03088)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf03885_797659-804358' '(at1g35190 : 408.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction, alkaloid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G46490.1); Has 8500 Blast hits to 8467 proteins in 983 species: Archae - 0; Bacteria - 1153; Metazoa - 122; Fungi - 1092; Plants - 4450; Viruses - 0; Other Eukaryotes - 1683 (source: NCBI BLink). & (gnl|cdd|35365 : 239.0) no description available & (gnl|cdd|33294 : 219.0) no description available & (q06942|fl3h_maldo : 90.9) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 816.0) & (original description: Putative LOC100192575, Description = Iron ion binding protein, PFAM = PF14226;PF03171)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf04243_49075-54086' '(at5g06060 : 301.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35944 : 237.0) no description available & (gnl|cdd|77008 : 215.0) no description available & (q75kh3|grdh_orysa : 89.0) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 580.0) & (original description: Putative TR1, Description = Tropinone reductase 1, PFAM = PF13561)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf04325_58372-66300' '(at3g57030 : 525.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1145 Blast hits to 1130 proteins in 241 species: Archae - 1; Bacteria - 292; Metazoa - 224; Fungi - 14; Plants - 486; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|36733 : 416.0) no description available & (p18417|stsy_catro : 177.0) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|66743 : 125.0) no description available & (reliability: 1050.0) & (original description: Putative SSL10, Description = Protein STRICTOSIDINE SYNTHASE-LIKE 10, PFAM = PF03088)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf04977_372512-391543' '(at2g20340 : 742.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity, tyrosine decarboxylase activity; INVOLVED IN: response to wounding, cellular amino acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aromatic-L-amino-acid decarboxylase (InterPro:IPR010977), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal-phosphate binding site (InterPro:IPR021115), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: L-tyrosine decarboxylase (TAIR:AT4G28680.1); Has 5452 Blast hits to 5431 proteins in 1792 species: Archae - 99; Bacteria - 1888; Metazoa - 2300; Fungi - 264; Plants - 262; Viruses - 5; Other Eukaryotes - 634 (source: NCBI BLink). & (q7xhl3|tydc1_orysa : 730.0) Tyrosine decarboxylase 1 (EC 4.1.1.25) - Oryza sativa (Rice) & (gnl|cdd|35847 : 632.0) no description available & (gnl|cdd|84666 : 472.0) no description available & (reliability: 1484.0) & (original description: Putative ELI5, Description = Tyrosine decarboxylase 1, PFAM = PF00282)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf05980_145070-151395' '(at5g06060 : 296.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35944 : 218.0) no description available & (gnl|cdd|77008 : 218.0) no description available & (q75kh3|grdh_orysa : 98.6) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 556.0) & (original description: Putative tr, Description = NAD(P)-binding rossmann-fold protein, PFAM = PF13561)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf06305_526970-531006' '(at3g59530 : 597.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, pollen exine formation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36733 : 383.0) no description available & (p18417|stsy_catro : 152.0) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|66743 : 103.0) no description available & (reliability: 1194.0) & (original description: Putative SSL13, Description = Protein STRICTOSIDINE SYNTHASE-LIKE 13, PFAM = PF03088)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf08208_461416-465092' '(at4g20840 : 604.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: apoplast, plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT4G20830.2); Has 4588 Blast hits to 4445 proteins in 696 species: Archae - 38; Bacteria - 1910; Metazoa - 4; Fungi - 1681; Plants - 781; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (gnl|cdd|85533 : 102.0) no description available & (reliability: 1146.0) & (original description: Putative BBE1, Description = Reticuline oxidase-like protein, PFAM = PF01565;PF08031)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf09670_140312-182508' '(at1g07440 : 301.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: response to cadmium ion, response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD-dependent epimerase/dehydratase family protein (TAIR:AT2G29340.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35944 : 243.0) no description available & (gnl|cdd|77008 : 222.0) no description available & (q75kh3|grdh_orysa : 112.0) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 572.0) & (original description: Putative TR1, Description = Tropinone reductase 1, PFAM = PF13561)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf10927_127284-144152' '(at2g20340 : 745.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity, tyrosine decarboxylase activity; INVOLVED IN: response to wounding, cellular amino acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aromatic-L-amino-acid decarboxylase (InterPro:IPR010977), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal-phosphate binding site (InterPro:IPR021115), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: L-tyrosine decarboxylase (TAIR:AT4G28680.1); Has 5452 Blast hits to 5431 proteins in 1792 species: Archae - 99; Bacteria - 1888; Metazoa - 2300; Fungi - 264; Plants - 262; Viruses - 5; Other Eukaryotes - 634 (source: NCBI BLink). & (q7xhl3|tydc1_orysa : 738.0) Tyrosine decarboxylase 1 (EC 4.1.1.25) - Oryza sativa (Rice) & (gnl|cdd|35847 : 628.0) no description available & (gnl|cdd|84666 : 467.0) no description available & (reliability: 1490.0) & (original description: Putative ddc, Description = Aromatic-L-amino-acid decarboxylase, PFAM = PF00282)' T '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'niben101scf15192_196694-199668' '(at3g57030 : 426.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1145 Blast hits to 1130 proteins in 241 species: Archae - 1; Bacteria - 292; Metazoa - 224; Fungi - 14; Plants - 486; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|36733 : 339.0) no description available & (p18417|stsy_catro : 164.0) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|66743 : 125.0) no description available & (reliability: 852.0) & (original description: Putative LAP3, Description = Strictosidine synthase family protein, PFAM = PF03088)' T '16.4.1.1001' 'secondary metabolism.N misc.alkaloid-like' 'calystegine a3' 'secondary metabolism, alkaloids' M '16.4.1.1001' 'secondary metabolism.N misc.alkaloid-like' 'nicotine' 'secondary metabolism, alkaloids' M '16.4.1.1002' 'secondary metabolism.N misc.alkaloid-like' 'calystegine b1' 'secondary metabolism, alkaloids' M '16.4.1.1003' 'secondary metabolism.N misc.alkaloid-like' 'calystegine b2' 'secondary metabolism, alkaloids' M '16.4.1.1004' 'secondary metabolism.N misc.alkaloid-like' 'calystegine b3' 'secondary metabolism, alkaloids' M '16.4.1.1005' 'secondary metabolism.N misc.alkaloid-like' 'calystegine b4' 'secondary metabolism, alkaloids' M '16.4.1.1006' 'secondary metabolism.N misc.alkaloid-like' 'calystegine c1' 'secondary metabolism, alkaloids' M '16.4.1.1007' 'secondary metabolism.N misc.alkaloid-like' 'n-methyl-calystegine b2' 'secondary metabolism, alkaloids' M '16.4.2' 'secondary metabolism.N misc.betaine' '' '' '16.4.2.1' 'secondary metabolism.N misc.betaine.betaine-aldehyde dehydrogenase' 'nbv0.3scaffold20195_1-9492' '(at3g48170 : 706.0) Arabidopsis thaliana putative betaine aldehyde dehydrogenase; aldehyde dehydrogenase 10A9 (ALDH10A9); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction, glycine betaine biosynthetic process from choline, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A8 (TAIR:AT1G74920.1); Has 62829 Blast hits to 62511 proteins in 3057 species: Archae - 483; Bacteria - 36293; Metazoa - 2617; Fungi - 2126; Plants - 2053; Viruses - 0; Other Eukaryotes - 19257 (source: NCBI BLink). & (p17202|badh_spiol : 681.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (gnl|cdd|84580 : 563.0) no description available & (gnl|cdd|37661 : 544.0) no description available & (reliability: 1412.0) & (original description: Putative BADH3, Description = BADH3 protein, PFAM = PF00171)' T '16.4.2.1' 'secondary metabolism.N misc.betaine.betaine-aldehyde dehydrogenase' 'nbv0.3scaffold20195_4-9678' '(at3g48170 : 658.0) Arabidopsis thaliana putative betaine aldehyde dehydrogenase; aldehyde dehydrogenase 10A9 (ALDH10A9); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction, glycine betaine biosynthetic process from choline, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A8 (TAIR:AT1G74920.1); Has 62829 Blast hits to 62511 proteins in 3057 species: Archae - 483; Bacteria - 36293; Metazoa - 2617; Fungi - 2126; Plants - 2053; Viruses - 0; Other Eukaryotes - 19257 (source: NCBI BLink). & (p17202|badh_spiol : 650.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (gnl|cdd|84580 : 558.0) no description available & (gnl|cdd|37661 : 541.0) no description available & (reliability: 1316.0) & (original description: Putative BADH3, Description = BADH3 protein, PFAM = PF00171)' T '16.4.2.1' 'secondary metabolism.N misc.betaine.betaine-aldehyde dehydrogenase' 'nbv0.3scaffold23372_9136-18270' '(at3g66658 : 1029.0) Encodes a putative aldehyde dehydrogenase. The gene is not responsive to osmotic stress and is expressed constitutively at a low level in plantlets and root cultures.; aldehyde dehydrogenase 22A1 (ALDH22A1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A8 (TAIR:AT1G74920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37665 : 792.0) no description available & (gnl|cdd|84580 : 388.0) no description available & (p17202|badh_spiol : 221.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 2058.0) & (original description: Putative ALDH22A1, Description = Aldehyde dehydrogenase 22A1, PFAM = PF00171)' T '16.4.2.1' 'secondary metabolism.N misc.betaine.betaine-aldehyde dehydrogenase' 'nbv0.5scaffold1895_338986-348660' '(at3g48170 : 646.0) Arabidopsis thaliana putative betaine aldehyde dehydrogenase; aldehyde dehydrogenase 10A9 (ALDH10A9); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction, glycine betaine biosynthetic process from choline, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A8 (TAIR:AT1G74920.1); Has 62829 Blast hits to 62511 proteins in 3057 species: Archae - 483; Bacteria - 36293; Metazoa - 2617; Fungi - 2126; Plants - 2053; Viruses - 0; Other Eukaryotes - 19257 (source: NCBI BLink). & (p17202|badh_spiol : 634.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (gnl|cdd|84580 : 545.0) no description available & (gnl|cdd|37661 : 528.0) no description available & (reliability: 1292.0) & (original description: Putative BADH3, Description = BADH3 protein, PFAM = PF00171)' T '16.4.2.1' 'secondary metabolism.N misc.betaine.betaine-aldehyde dehydrogenase' 'nbv0.5scaffold1895_339383-343133' '(at3g48170 : 222.0) Arabidopsis thaliana putative betaine aldehyde dehydrogenase; aldehyde dehydrogenase 10A9 (ALDH10A9); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction, glycine betaine biosynthetic process from choline, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A8 (TAIR:AT1G74920.1); Has 62829 Blast hits to 62511 proteins in 3057 species: Archae - 483; Bacteria - 36293; Metazoa - 2617; Fungi - 2126; Plants - 2053; Viruses - 0; Other Eukaryotes - 19257 (source: NCBI BLink). & (p28237|badh_betvu : 222.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Beta vulgaris (Sugar beet) & (gnl|cdd|84580 : 189.0) no description available & (gnl|cdd|37661 : 177.0) no description available & (reliability: 444.0) & (original description: Putative aldA, Description = Aldehyde dehydrogenase, PFAM = PF00171)' T '16.4.2.1' 'secondary metabolism.N misc.betaine.betaine-aldehyde dehydrogenase' 'niben101scf02111_1103328-1117560' '(at3g66658 : 1028.0) Encodes a putative aldehyde dehydrogenase. The gene is not responsive to osmotic stress and is expressed constitutively at a low level in plantlets and root cultures.; aldehyde dehydrogenase 22A1 (ALDH22A1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A8 (TAIR:AT1G74920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37665 : 790.0) no description available & (gnl|cdd|84580 : 390.0) no description available & (p17202|badh_spiol : 219.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 2056.0) & (original description: Putative ALDH22A1, Description = Aldehyde dehydrogenase 22A1, PFAM = PF00171)' T '16.4.2.1' 'secondary metabolism.N misc.betaine.betaine-aldehyde dehydrogenase' 'niben101scf02237_161239-179087' '(at1g74920 : 759.0) Arabidopsis thaliana similar to betaine aldehyde dehydrogenase; aldehyde dehydrogenase 10A8 (ALDH10A8); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A9 (TAIR:AT3G48170.1). & (p17202|badh_spiol : 748.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (gnl|cdd|84580 : 577.0) no description available & (gnl|cdd|37661 : 574.0) no description available & (reliability: 1518.0) & (original description: Putative badh, Description = Betaine aldehyde dehydrogenase, PFAM = PF00171)' T '16.4.2.1' 'secondary metabolism.N misc.betaine.betaine-aldehyde dehydrogenase' 'niben101scf07162_435944-447435' '(p17202|badh_spiol : 756.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (at1g74920 : 733.0) Arabidopsis thaliana similar to betaine aldehyde dehydrogenase; aldehyde dehydrogenase 10A8 (ALDH10A8); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A9 (TAIR:AT3G48170.1). & (gnl|cdd|37661 : 575.0) no description available & (gnl|cdd|84580 : 574.0) no description available & (reliability: 1466.0) & (original description: Putative betB, Description = Betaine aldehyde dehydrogenase, NAD-dependent, PFAM = PF00171)' T '16.4.2.1' 'secondary metabolism.N misc.betaine.betaine-aldehyde dehydrogenase' 'niben101scf16278_9116-19685' '(p17202|badh_spiol : 757.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (at1g74920 : 730.0) Arabidopsis thaliana similar to betaine aldehyde dehydrogenase; aldehyde dehydrogenase 10A8 (ALDH10A8); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A9 (TAIR:AT3G48170.1). & (gnl|cdd|84580 : 576.0) no description available & (gnl|cdd|37661 : 574.0) no description available & (reliability: 1460.0) & (original description: Putative badh, Description = Aldehyde dehydrogenase, PFAM = PF00171)' T '16.4.3' 'secondary metabolism.N misc.cyanogenic glycosides' '' '' '16.4.3.1' 'secondary metabolism.N misc.cyanogenic glycosides.cyanase' 'nbv0.5scaffold4505_15901-39423' '(at3g23490 : 199.0) cyanase; cyanase (CYN); FUNCTIONS IN: hydro-lyase activity, DNA binding, cyanate hydratase activity; INVOLVED IN: cyanate metabolic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lambda repressor-like, DNA-binding (InterPro:IPR010982), Cyanase (InterPro:IPR008076), Cyanate lyase, C-terminal (InterPro:IPR003712); Has 993 Blast hits to 992 proteins in 414 species: Archae - 3; Bacteria - 787; Metazoa - 7; Fungi - 73; Plants - 52; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (q9fwk4|cyns_orysa : 196.0) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase) (Cyanate hydrolase) - Oryza sativa (Rice) & (gnl|cdd|81052 : 117.0) no description available & (reliability: 398.0) & (original description: Putative cynS, Description = Cyanate hydratase, PFAM = PF02560)' T '16.4.3.1' 'secondary metabolism.N misc.cyanogenic glycosides.cyanase' 'niben101scf00367_1004864-1013815' '(at3g23490 : 203.0) cyanase; cyanase (CYN); FUNCTIONS IN: hydro-lyase activity, DNA binding, cyanate hydratase activity; INVOLVED IN: cyanate metabolic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lambda repressor-like, DNA-binding (InterPro:IPR010982), Cyanase (InterPro:IPR008076), Cyanate lyase, C-terminal (InterPro:IPR003712); Has 993 Blast hits to 992 proteins in 414 species: Archae - 3; Bacteria - 787; Metazoa - 7; Fungi - 73; Plants - 52; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (q9fwk4|cyns_orysa : 197.0) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase) (Cyanate hydrolase) - Oryza sativa (Rice) & (gnl|cdd|81052 : 115.0) no description available & (reliability: 406.0) & (original description: Putative cynS, Description = Cyanate hydratase, PFAM = PF02560)' T '16.4.3.1' 'secondary metabolism.N misc.cyanogenic glycosides.cyanase' 'niben101scf00367_1025481-1035802' '(at3g23490 : 210.0) cyanase; cyanase (CYN); FUNCTIONS IN: hydro-lyase activity, DNA binding, cyanate hydratase activity; INVOLVED IN: cyanate metabolic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lambda repressor-like, DNA-binding (InterPro:IPR010982), Cyanase (InterPro:IPR008076), Cyanate lyase, C-terminal (InterPro:IPR003712); Has 993 Blast hits to 992 proteins in 414 species: Archae - 3; Bacteria - 787; Metazoa - 7; Fungi - 73; Plants - 52; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (q9fwk4|cyns_orysa : 206.0) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase) (Cyanate hydrolase) - Oryza sativa (Rice) & (gnl|cdd|81052 : 126.0) no description available & (reliability: 420.0) & (original description: Putative CYN, Description = Cyanate hydratase, PFAM = PF02560)' T '16.4.3.1' 'secondary metabolism.N misc.cyanogenic glycosides.cyanase' 'niben101scf05670_118183-125710' '(at3g23490 : 211.0) cyanase; cyanase (CYN); FUNCTIONS IN: hydro-lyase activity, DNA binding, cyanate hydratase activity; INVOLVED IN: cyanate metabolic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lambda repressor-like, DNA-binding (InterPro:IPR010982), Cyanase (InterPro:IPR008076), Cyanate lyase, C-terminal (InterPro:IPR003712); Has 993 Blast hits to 992 proteins in 414 species: Archae - 3; Bacteria - 787; Metazoa - 7; Fungi - 73; Plants - 52; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (q9fwk4|cyns_orysa : 201.0) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase) (Cyanate hydrolase) - Oryza sativa (Rice) & (gnl|cdd|81052 : 125.0) no description available & (reliability: 422.0) & (original description: Putative CYN, Description = Cyanate hydratase, PFAM = PF02560)' T '16.5' 'secondary metabolism.sulfur-containing' 'niben101scf11245_129774-135986' '(at1g10500 : 216.0) Involved in chloroplast Fe-S cluster assembly. Located in the chloroplast stroma. Expressed preferentially in green tissues.; chloroplast-localized ISCA-like protein (CPISCA); CONTAINS InterPro DOMAIN/s: FeS cluster insertion, C-terminal, conserved site (InterPro:IPR017870), FeS cluster biogenesis (InterPro:IPR000361), FeS cluster insertion (InterPro:IPR016092); BEST Arabidopsis thaliana protein match is: Iron-sulphur cluster biosynthesis family protein (TAIR:AT5G03905.1); Has 10385 Blast hits to 10384 proteins in 1842 species: Archae - 43; Bacteria - 5944; Metazoa - 237; Fungi - 240; Plants - 172; Viruses - 0; Other Eukaryotes - 3749 (source: NCBI BLink). & (gnl|cdd|36336 : 158.0) no description available & (gnl|cdd|30664 : 137.0) no description available & (reliability: 432.0) & (original description: Putative slr1417, Description = Uncharacterized protein slr1417, PFAM = PF01521)' T '16.5.1' 'secondary metabolism.sulfur-containing.glucosinolates' '' '' '16.5.1.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis' '' '' '16.5.1.1.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic' '' '' '16.5.1.1.1.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.branched-chain amino acid aminotransferase (BCAT/MAAT)' 'nbv0.3scaffold183_8314-13012' '(at1g10070 : 456.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 421.0) no description available & (gnl|cdd|81992 : 319.0) no description available & (reliability: 834.0) & (original description: Putative BCAT2, Description = Branched-chain-amino-acid aminotransferase 2, chloroplastic, PFAM = PF01063)' T '16.5.1.1.1.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.branched-chain amino acid aminotransferase (BCAT/MAAT)' 'niben044scf00017805ctg009_4089-14515' '(at5g65780 : 525.0) encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant; ATBCAT-5; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: little nuclei4 (TAIR:AT5G65770.3). & (gnl|cdd|36193 : 446.0) no description available & (gnl|cdd|81992 : 364.0) no description available & (reliability: 1048.0) & (original description: Putative BCAT5, Description = Branched-chain-amino-acid aminotransferase 5, chloroplastic, PFAM = PF01063)' T '16.5.1.1.1.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.branched-chain amino acid aminotransferase (BCAT/MAAT)' 'niben101scf00904_28125-58391' '(at5g65780 : 555.0) encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant; ATBCAT-5; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: little nuclei4 (TAIR:AT5G65770.3). & (gnl|cdd|36193 : 448.0) no description available & (gnl|cdd|81992 : 355.0) no description available & (reliability: 1090.0) & (original description: Putative BCAT5, Description = Branched-chain-amino-acid aminotransferase 5, chloroplastic, PFAM = PF01063)' T '16.5.1.1.1.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.branched-chain amino acid aminotransferase (BCAT/MAAT)' 'niben101scf04700_79196-85409' '(at1g10070 : 453.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 414.0) no description available & (gnl|cdd|81992 : 323.0) no description available & (reliability: 852.0) & (original description: Putative BCAT2, Description = Branched-chain-amino-acid aminotransferase 2, chloroplastic, PFAM = PF01063)' T '16.5.1.1.1.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.branched-chain amino acid aminotransferase (BCAT/MAAT)' 'niben101scf04884_119708-130150' '(at5g65780 : 531.0) encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant; ATBCAT-5; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: little nuclei4 (TAIR:AT5G65770.3). & (gnl|cdd|36193 : 450.0) no description available & (gnl|cdd|81992 : 367.0) no description available & (reliability: 1062.0) & (original description: Putative ilvE, Description = Branched-chain-amino-acid aminotransferase, PFAM = PF01063)' T '16.5.1.1.1.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.branched-chain amino acid aminotransferase (BCAT/MAAT)' 'niben101scf08939_29970-43319' '(at1g10070 : 458.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 425.0) no description available & (gnl|cdd|81992 : 321.0) no description available & (reliability: 856.0) & (original description: Putative BCAT2, Description = Branched-chain-amino-acid aminotransferase 2, chloroplastic, PFAM = PF01063)' T '16.5.1.1.1.2' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.methylthioalkylmalate synthase (MAM)' '' '' '16.5.1.1.1.3' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.methylthioalkylmalate isomerase large subunit (MAM-IL)' 'niben044scf00029861ctg010_482-6677' '(at4g13430 : 370.0) Encodes methylthioalkylmalate isomerase.; isopropyl malate isomerase large subunit 1 (IIL1); FUNCTIONS IN: lyase activity, intramolecular transferase activity, transferring hydroxy groups; INVOLVED IN: glucosinolate biosynthetic process, response to cadmium ion, metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha (InterPro:IPR001030), Homoaconitase/3-isopropylmalate dehydratase, small/large subunit (InterPro:IPR015936), Homoaconitase/3-isopropylmalate dehydratase, large subunit, subgroup (InterPro:IPR006251), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 (InterPro:IPR015932), Aconitase-like core (InterPro:IPR015937), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (InterPro:IPR015931); BEST Arabidopsis thaliana protein match is: aconitase 2 (TAIR:AT4G26970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35675 : 269.0) no description available & (gnl|cdd|30414 : 228.0) no description available & (reliability: 740.0) & (original description: Putative dmdA, Description = 3-isopropylmalate dehydratase large subunit, PFAM = PF00330;PF00330)' T '16.5.1.1.1.3' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.methylthioalkylmalate isomerase large subunit (MAM-IL)' 'niben101scf01221_68726-79850' '(at4g13430 : 831.0) Encodes methylthioalkylmalate isomerase.; isopropyl malate isomerase large subunit 1 (IIL1); FUNCTIONS IN: lyase activity, intramolecular transferase activity, transferring hydroxy groups; INVOLVED IN: glucosinolate biosynthetic process, response to cadmium ion, metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha (InterPro:IPR001030), Homoaconitase/3-isopropylmalate dehydratase, small/large subunit (InterPro:IPR015936), Homoaconitase/3-isopropylmalate dehydratase, large subunit, subgroup (InterPro:IPR006251), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 (InterPro:IPR015932), Aconitase-like core (InterPro:IPR015937), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (InterPro:IPR015931); BEST Arabidopsis thaliana protein match is: aconitase 2 (TAIR:AT4G26970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30079 : 506.0) no description available & (gnl|cdd|35675 : 504.0) no description available & (q6yzx6|acoc_orysa : 86.3) Putative aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) - Oryza sativa (Rice) & (reliability: 1662.0) & (original description: Putative IIL1, Description = 3-isopropylmalate dehydratase large subunit, PFAM = PF00330;PF00330)' T '16.5.1.1.1.3' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.methylthioalkylmalate isomerase large subunit (MAM-IL)' 'niben101scf01221_215260-225239' '(at4g13430 : 823.0) Encodes methylthioalkylmalate isomerase.; isopropyl malate isomerase large subunit 1 (IIL1); FUNCTIONS IN: lyase activity, intramolecular transferase activity, transferring hydroxy groups; INVOLVED IN: glucosinolate biosynthetic process, response to cadmium ion, metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha (InterPro:IPR001030), Homoaconitase/3-isopropylmalate dehydratase, small/large subunit (InterPro:IPR015936), Homoaconitase/3-isopropylmalate dehydratase, large subunit, subgroup (InterPro:IPR006251), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 (InterPro:IPR015932), Aconitase-like core (InterPro:IPR015937), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (InterPro:IPR015931); BEST Arabidopsis thaliana protein match is: aconitase 2 (TAIR:AT4G26970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30079 : 508.0) no description available & (gnl|cdd|35675 : 486.0) no description available & (q6yzx6|acoc_orysa : 85.9) Putative aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) - Oryza sativa (Rice) & (reliability: 1646.0) & (original description: Putative dmdA, Description = 2,3-dimethylmalate dehydratase large subunit, PFAM = PF00330)' T '16.5.1.1.1.3' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.methylthioalkylmalate isomerase large subunit (MAM-IL)' 'niben101scf08088_294786-306666' '(at4g13430 : 868.0) Encodes methylthioalkylmalate isomerase.; isopropyl malate isomerase large subunit 1 (IIL1); FUNCTIONS IN: lyase activity, intramolecular transferase activity, transferring hydroxy groups; INVOLVED IN: glucosinolate biosynthetic process, response to cadmium ion, metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha (InterPro:IPR001030), Homoaconitase/3-isopropylmalate dehydratase, small/large subunit (InterPro:IPR015936), Homoaconitase/3-isopropylmalate dehydratase, large subunit, subgroup (InterPro:IPR006251), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 (InterPro:IPR015932), Aconitase-like core (InterPro:IPR015937), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (InterPro:IPR015931); BEST Arabidopsis thaliana protein match is: aconitase 2 (TAIR:AT4G26970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30079 : 524.0) no description available & (gnl|cdd|35675 : 523.0) no description available & (q6yzx6|acoc_orysa : 82.0) Putative aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) - Oryza sativa (Rice) & (reliability: 1736.0) & (original description: Putative IIL1, Description = 3-isopropylmalate dehydratase large subunit, PFAM = PF00330)' T '16.5.1.1.1.4' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.methylthioalkylmalate isomerase small subunit (MAM-IS)' 'nbv0.3scaffold1013_3275-6048' '(at2g43090 : 276.0) Aconitase/3-isopropylmalate dehydratase protein; FUNCTIONS IN: hydro-lyase activity, 3-isopropylmalate dehydratase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-isopropylmalate dehydratase, small subunit-like (InterPro:IPR012305), Aconitase-like core (InterPro:IPR015937), Aconitase/3-isopropylmalate dehydratase, swivel (InterPro:IPR015928); BEST Arabidopsis thaliana protein match is: isopropylmalate isomerase 1 (TAIR:AT3G58990.1). & (gnl|cdd|35675 : 248.0) no description available & (gnl|cdd|80669 : 141.0) no description available & (reliability: 506.0) & (original description: Putative dmdB, Description = 3-isopropylmalate dehydratase, small subunit, PFAM = PF00694)' T '16.5.1.1.1.5' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.methylthioalkylmalate dehydrogenase (MAM-D)' 'niben044scf00024661ctg003_3997-12266' '(at1g80560 : 599.0) The AtIMD2 is one out of 3 genes encoding the enzyme 3-isopropylmalate dehydrogenase involved in leucine biosynthesis in Arabidopsis. Its subcellular location has been targeted to plastids.; isopropylmalate dehydrogenase 2 (IMD2); FUNCTIONS IN: 3-isopropylmalate dehydrogenase activity; INVOLVED IN: leucine biosynthetic process, metabolic process; LOCATED IN: chloroplast, chloroplast stroma, plastid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Isopropylmalate dehydrogenase (InterPro:IPR004429), Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isopropylmalate dehydrogenase 3 (TAIR:AT1G31180.1); Has 15265 Blast hits to 15265 proteins in 2613 species: Archae - 395; Bacteria - 8292; Metazoa - 578; Fungi - 832; Plants - 243; Viruses - 0; Other Eukaryotes - 4925 (source: NCBI BLink). & (p29102|leu3_brana : 588.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Brassica napus (Rape) & (gnl|cdd|36005 : 538.0) no description available & (gnl|cdd|80743 : 535.0) no description available & (reliability: 1198.0) & (original description: Putative IMDH2, Description = 3-isopropylmalate dehydrogenase 2, chloroplastic, PFAM = PF00180)' T '16.5.1.1.1.5' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.methylthioalkylmalate dehydrogenase (MAM-D)' 'niben101scf01899_760268-770046' '(at1g80560 : 627.0) The AtIMD2 is one out of 3 genes encoding the enzyme 3-isopropylmalate dehydrogenase involved in leucine biosynthesis in Arabidopsis. Its subcellular location has been targeted to plastids.; isopropylmalate dehydrogenase 2 (IMD2); FUNCTIONS IN: 3-isopropylmalate dehydrogenase activity; INVOLVED IN: leucine biosynthetic process, metabolic process; LOCATED IN: chloroplast, chloroplast stroma, plastid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Isopropylmalate dehydrogenase (InterPro:IPR004429), Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isopropylmalate dehydrogenase 3 (TAIR:AT1G31180.1); Has 15265 Blast hits to 15265 proteins in 2613 species: Archae - 395; Bacteria - 8292; Metazoa - 578; Fungi - 832; Plants - 243; Viruses - 0; Other Eukaryotes - 4925 (source: NCBI BLink). & (p29102|leu3_brana : 617.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Brassica napus (Rape) & (gnl|cdd|80743 : 541.0) no description available & (gnl|cdd|36005 : 537.0) no description available & (reliability: 1254.0) & (original description: Putative IMDH2, Description = 3-isopropylmalate dehydrogenase 2, chloroplastic, PFAM = PF00180)' T '16.5.1.1.1.6' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.CYP79F1/F2 monooxygenase' '' '' '16.5.1.1.1.7' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.CYP83A1 phenylacetaldoxime monooxygenase' '' '' '16.5.1.1.1.8' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.UDP-glycosyltransferase' 'nbv0.5scaffold253_418977-421584' '(at2g31790 : 169.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: Uridine diphosphate glycosyltransferase 74E2 (TAIR:AT1G05680.1); Has 8757 Blast hits to 8682 proteins in 575 species: Archae - 0; Bacteria - 847; Metazoa - 2565; Fungi - 65; Plants - 5076; Viruses - 120; Other Eukaryotes - 84 (source: NCBI BLink). & (q41819|iaag_maize : 118.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 89.2) no description available & (reliability: 338.0) & (original description: Putative UGT3, Description = Glycosyltransferase, PFAM = PF00201)' T '16.5.1.1.1.8' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.UDP-glycosyltransferase' 'niben044scf00019806ctg002_15710-18414' '(at1g05680 : 251.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 190.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 134.0) no description available & (gnl|cdd|79510 : 102.0) no description available & (reliability: 454.0) & (original description: Putative GT, Description = Glycosyltransferase, PFAM = PF00201)' T '16.5.1.1.1.8' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.UDP-glycosyltransferase' 'niben101scf01386_22394-25809' '(p56725|zox_phavu : 434.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36780 : 186.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 155.0) no description available & (gnl|cdd|79510 : 88.5) no description available & (reliability: 338.0) & (original description: Putative CISZOG1, Description = Cis-zeatin O-glucosyltransferase 1, PFAM = PF00201)' T '16.5.1.1.1.8' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.UDP-glycosyltransferase' 'niben101scf17597_151847-155154' '(gnl|cdd|36406 : 170.0) no description available & (at4g34131 : 162.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43716|ufog_pethy : 142.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|32004 : 83.2) no description available & (reliability: 292.0) & (original description: Putative NSGT1, Description = Glycosyltransferase, PFAM = PF00201)' T '16.5.1.1.1.9' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.sulfotransferase' 'nbv0.3scaffold20471_307-3498' '(gnl|cdd|36797 : 274.0) no description available & (at1g74100 : 266.0) encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with different desulfoglucosinolates, the best substrate is indole-3-methyl-dsGS, followed by benzyl-dsGS. Expression was induced by wounding, jasmonate and ethylene stimulates.; sulfotransferase 16 (SOT16); FUNCTIONS IN: sulfotransferase activity, desulfoglucosinolate sulfotransferase activity; INVOLVED IN: glucosinolate biosynthetic process, response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 17 (TAIR:AT1G18590.1); Has 2855 Blast hits to 2817 proteins in 179 species: Archae - 0; Bacteria - 199; Metazoa - 1686; Fungi - 0; Plants - 534; Viruses - 0; Other Eukaryotes - 436 (source: NCBI BLink). & (gnl|cdd|84950 : 185.0) no description available & (reliability: 532.0) & (original description: Putative SOT6, Description = Cytosolic sulfotransferase 6, PFAM = PF00685)' T '16.5.1.1.1.9' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.sulfotransferase' 'niben101scf00783_628131-632501' '(gnl|cdd|36797 : 268.0) no description available & (at3g45070 : 223.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: sulfotransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G45080.1); Has 2794 Blast hits to 2750 proteins in 189 species: Archae - 0; Bacteria - 202; Metazoa - 1707; Fungi - 1; Plants - 542; Viruses - 0; Other Eukaryotes - 342 (source: NCBI BLink). & (gnl|cdd|84950 : 197.0) no description available & (reliability: 428.0) & (original description: Putative ST1, Description = Sulfotransferase, PFAM = PF00685)' T '16.5.1.1.1.9' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.sulfotransferase' 'niben101scf03045_342816-345751' '(gnl|cdd|36797 : 258.0) no description available & (at5g07010 : 210.0) Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).; sulfotransferase 2A (ST2A); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 2B (TAIR:AT5G07000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84950 : 190.0) no description available & (reliability: 414.0) & (original description: Putative PGSC0003DMG400039363, Description = Sulfotransferase, PFAM = PF00685)' T '16.5.1.1.1.9' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.sulfotransferase' 'niben101scf04231_297861-300898' '(gnl|cdd|36797 : 284.0) no description available & (at5g07010 : 266.0) Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).; sulfotransferase 2A (ST2A); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 2B (TAIR:AT5G07000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84950 : 209.0) no description available & (reliability: 516.0) & (original description: Putative SOT5, Description = Sulfotransferase, PFAM = PF00685)' T '16.5.1.1.1.9' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.sulfotransferase' 'niben101scf04231_335748-343576' '(gnl|cdd|36797 : 285.0) no description available & (at1g18590 : 280.0) encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with preference with methionine-derived desulfoglucosinolates.; sulfotransferase 17 (SOT17); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: desulfo-glucosinolate sulfotransferase 18 (TAIR:AT1G74090.1); Has 2933 Blast hits to 2889 proteins in 198 species: Archae - 0; Bacteria - 241; Metazoa - 1692; Fungi - 1; Plants - 541; Viruses - 0; Other Eukaryotes - 458 (source: NCBI BLink). & (gnl|cdd|84950 : 209.0) no description available & (reliability: 560.0) & (original description: Putative SOT17, Description = Cytosolic sulfotransferase 17, PFAM = PF00685)' T '16.5.1.1.1.10' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.flavin-containing monooxygenase' 'niben101scf15515_98910-104697' '(at1g12140 : 419.0) belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates; flavin-monooxygenase glucosinolate S-oxygenase 5 (FMO GS-OX5); CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase FMO (InterPro:IPR000960), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: flavin-monooxygenase glucosinolate S-oxygenase 3 (TAIR:AT1G62560.1); Has 11380 Blast hits to 10828 proteins in 1431 species: Archae - 28; Bacteria - 5328; Metazoa - 1193; Fungi - 1290; Plants - 802; Viruses - 0; Other Eukaryotes - 2739 (source: NCBI BLink). & (gnl|cdd|36613 : 383.0) no description available & (gnl|cdd|84997 : 149.0) no description available & (reliability: 838.0) & (original description: Putative FMO3, Description = Flavin-containing monooxygenase, PFAM = PF00743;PF00743)' T '16.5.1.1.1.11' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.glucosinolate 2-oxoglutarate-dependent dioxygenase (AOP)' '' '' '16.5.1.1.1.12' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.benzoate-CoA ligase' 'niben101scf04020_67046-71181' '(gnl|cdd|82505 : 738.0) no description available & (at1g65880 : 672.0) Encodes a benzoate-CoA ligase. Involved in the biosynthesis of benzoyloxyglucosinolate in Arabidopsis seeds.; benzoyloxyglucosinolate 1 (BZO1); CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 12 (TAIR:AT1G65890.1); Has 76758 Blast hits to 70084 proteins in 3572 species: Archae - 1128; Bacteria - 49908; Metazoa - 3256; Fungi - 3775; Plants - 2105; Viruses - 1; Other Eukaryotes - 16585 (source: NCBI BLink). & (gnl|cdd|36391 : 521.0) no description available & (o24145|4cl1_tobac : 137.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1344.0) & (original description: Putative AAE20, Description = Benzoate--CoA ligase, peroxisomal, PFAM = PF13193;PF00501)' T '16.5.1.1.1.12' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.benzoate-CoA ligase' 'niben101scf04020_275533-279903' '(gnl|cdd|82505 : 734.0) no description available & (at1g66120 : 662.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: embryo, sepal, male gametophyte, carpel, stamen; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 12 (TAIR:AT1G65890.1); Has 78414 Blast hits to 71735 proteins in 3650 species: Archae - 1135; Bacteria - 51527; Metazoa - 3303; Fungi - 3365; Plants - 2332; Viruses - 1; Other Eukaryotes - 16751 (source: NCBI BLink). & (gnl|cdd|36391 : 516.0) no description available & (q42982|4cl2_orysa : 143.0) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Oryza sativa (Rice) & (reliability: 1316.0) & (original description: Putative AAE, Description = Acyl-activating enzyme-like protein, PFAM = PF00501;PF13193)' T '16.5.1.1.1.13' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.2-oxoglutarate-dependent dioxygenase' 'niben101scf02063_275991-280564' '(o04847|dv4h_catro : 139.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g06620 : 134.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (gnl|cdd|35365 : 83.9) no description available & (reliability: 246.0) & (original description: Putative p69RF, Description = Desacetoxyvindoline 4-hydroxylase, putative, PFAM = PF14226)' T '16.5.1.1.1.13' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.2-oxoglutarate-dependent dioxygenase' 'niben101scf02063_280565-289513' '(o04847|dv4h_catro : 379.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g06620 : 363.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (gnl|cdd|35365 : 276.0) no description available & (gnl|cdd|33294 : 154.0) no description available & (reliability: 672.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase isogeny 1, PFAM = PF14226;PF03171)' T '16.5.1.1.1.13' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.2-oxoglutarate-dependent dioxygenase' 'niben101scf03590_104512-107677' '(gnl|cdd|35365 : 194.0) no description available & (gnl|cdd|33294 : 136.0) no description available & (at5g08640 : 129.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o04847|dv4h_catro : 121.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 238.0) & (original description: Putative GA7ox1, Description = Flavonol synthase/flavanone 3-hydroxylase, PFAM = PF03171;PF14226)' T '16.5.1.1.1.13' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.2-oxoglutarate-dependent dioxygenase' 'niben101scf07987_132688-136577' '(at1g06620 : 413.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 380.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 283.0) no description available & (gnl|cdd|33294 : 153.0) no description available & (reliability: 776.0) & (original description: Putative p69RF, Description = 2OG-Fe(II) oxygenase family oxidoreductase, PFAM = PF14226;PF03171)' T '16.5.1.1.1.13' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.2-oxoglutarate-dependent dioxygenase' 'niben101scf10671_31679-34844' '(gnl|cdd|35365 : 197.0) no description available & (gnl|cdd|33294 : 133.0) no description available & (at5g08640 : 128.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o04847|dv4h_catro : 121.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 238.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T '16.5.1.1.2' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aromatic' '' '' '16.5.1.1.2.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aromatic.CYP79A2 monooxygenase' 'nbv0.5scaffold1063_1-27979' '(at5g05260 : 177.0) Encodes cytochrome P450 CYP79A2.; cytochrome p450 79a2 (CYP79A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene (TAIR:AT5G35917.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43135|c79a1_sorbi : 175.0) Cytochrome P450 79A1 (EC 1.14.13.41) (Tyrosine N-monooxygenase) (Cytochrome P450Tyr) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (gnl|cdd|35378 : 116.0) no description available & (gnl|cdd|84486 : 103.0) no description available & (reliability: 354.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T '16.5.1.1.2.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aromatic.CYP79A2 monooxygenase' 'niben044scf00000397ctg016_1-2540' '(at5g35917 : 254.0) a pseudogene with cytochrome P450 domain; "cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene" (CYP79A3P); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome p450 79a2 (TAIR:AT5G05260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o81345|c79b1_sinal : 229.0) Cytochrome P450 79B1 (EC 1.14.-.-) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|35378 : 143.0) no description available & (reliability: 498.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T '16.5.1.1.2.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aromatic.CYP79A2 monooxygenase' 'niben101scf03659_320467-394348' '(q43135|c79a1_sorbi : 161.0) Cytochrome P450 79A1 (EC 1.14.13.41) (Tyrosine N-monooxygenase) (Cytochrome P450Tyr) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (at4g39950 : 157.0) Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates.; "cytochrome P450, family 79, subfamily B, polypeptide 2" (CYP79B2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: in 8 processes; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily B, polypeptide 3 (TAIR:AT2G22330.1); Has 28507 Blast hits to 28366 proteins in 1550 species: Archae - 44; Bacteria - 2565; Metazoa - 10705; Fungi - 5395; Plants - 8898; Viruses - 0; Other Eukaryotes - 900 (source: NCBI BLink). & (gnl|cdd|35378 : 106.0) no description available & (gnl|cdd|84486 : 96.9) no description available & (reliability: 312.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T '16.5.1.1.2.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aromatic.CYP79A2 monooxygenase' 'niben101scf03659_325845-331148' '(at5g05260 : 495.0) Encodes cytochrome P450 CYP79A2.; cytochrome p450 79a2 (CYP79A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene (TAIR:AT5G35917.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o81345|c79b1_sinal : 477.0) Cytochrome P450 79B1 (EC 1.14.-.-) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|35378 : 344.0) no description available & (gnl|cdd|84486 : 225.0) no description available & (reliability: 990.0) & (original description: Putative CYP79D4, Description = Isoleucine N-monooxygenase 2, PFAM = PF00067)' T '16.5.1.1.2.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aromatic.CYP79A2 monooxygenase' 'niben101scf10232_363045-369488' '(q43135|c79a1_sorbi : 175.0) Cytochrome P450 79A1 (EC 1.14.13.41) (Tyrosine N-monooxygenase) (Cytochrome P450Tyr) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (at5g05260 : 173.0) Encodes cytochrome P450 CYP79A2.; cytochrome p450 79a2 (CYP79A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene (TAIR:AT5G35917.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35378 : 108.0) no description available & (gnl|cdd|84486 : 89.6) no description available & (reliability: 346.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T '16.5.1.1.3' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole' '' '' '16.5.1.1.3.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.CYP79B2 monooxygenase' 'nbv0.5scaffold1063_1-27979' '(at5g05260 : 177.0) Encodes cytochrome P450 CYP79A2.; cytochrome p450 79a2 (CYP79A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene (TAIR:AT5G35917.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43135|c79a1_sorbi : 175.0) Cytochrome P450 79A1 (EC 1.14.13.41) (Tyrosine N-monooxygenase) (Cytochrome P450Tyr) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (gnl|cdd|35378 : 116.0) no description available & (gnl|cdd|84486 : 103.0) no description available & (reliability: 342.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T '16.5.1.1.3.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.CYP79B2 monooxygenase' 'niben044scf00000397ctg016_1-2540' '(at5g35917 : 254.0) a pseudogene with cytochrome P450 domain; "cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene" (CYP79A3P); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome p450 79a2 (TAIR:AT5G05260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o81345|c79b1_sinal : 229.0) Cytochrome P450 79B1 (EC 1.14.-.-) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|35378 : 143.0) no description available & (reliability: 464.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T '16.5.1.1.3.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.CYP79B2 monooxygenase' 'niben101scf03659_320467-394348' '(q43135|c79a1_sorbi : 161.0) Cytochrome P450 79A1 (EC 1.14.13.41) (Tyrosine N-monooxygenase) (Cytochrome P450Tyr) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (at4g39950 : 157.0) Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates.; "cytochrome P450, family 79, subfamily B, polypeptide 2" (CYP79B2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: in 8 processes; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily B, polypeptide 3 (TAIR:AT2G22330.1); Has 28507 Blast hits to 28366 proteins in 1550 species: Archae - 44; Bacteria - 2565; Metazoa - 10705; Fungi - 5395; Plants - 8898; Viruses - 0; Other Eukaryotes - 900 (source: NCBI BLink). & (gnl|cdd|35378 : 106.0) no description available & (gnl|cdd|84486 : 96.9) no description available & (reliability: 314.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T '16.5.1.1.3.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.CYP79B2 monooxygenase' 'niben101scf03659_325845-331148' '(at5g05260 : 495.0) Encodes cytochrome P450 CYP79A2.; cytochrome p450 79a2 (CYP79A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene (TAIR:AT5G35917.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o81345|c79b1_sinal : 477.0) Cytochrome P450 79B1 (EC 1.14.-.-) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|35378 : 344.0) no description available & (gnl|cdd|84486 : 225.0) no description available & (reliability: 952.0) & (original description: Putative CYP79D4, Description = Isoleucine N-monooxygenase 2, PFAM = PF00067)' T '16.5.1.1.3.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.CYP79B2 monooxygenase' 'niben101scf10232_363045-369488' '(q43135|c79a1_sorbi : 175.0) Cytochrome P450 79A1 (EC 1.14.13.41) (Tyrosine N-monooxygenase) (Cytochrome P450Tyr) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (at5g05260 : 173.0) Encodes cytochrome P450 CYP79A2.; cytochrome p450 79a2 (CYP79A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene (TAIR:AT5G35917.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35378 : 108.0) no description available & (gnl|cdd|84486 : 89.6) no description available & (reliability: 324.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T '16.5.1.1.3.2' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.CYP79B3 monooxygenase' 'nbv0.5scaffold1063_1-27979' '(at5g05260 : 177.0) Encodes cytochrome P450 CYP79A2.; cytochrome p450 79a2 (CYP79A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene (TAIR:AT5G35917.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43135|c79a1_sorbi : 175.0) Cytochrome P450 79A1 (EC 1.14.13.41) (Tyrosine N-monooxygenase) (Cytochrome P450Tyr) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (gnl|cdd|35378 : 116.0) no description available & (gnl|cdd|84486 : 103.0) no description available & (reliability: 342.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T '16.5.1.1.3.2' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.CYP79B3 monooxygenase' 'niben101scf03659_320467-394348' '(q43135|c79a1_sorbi : 161.0) Cytochrome P450 79A1 (EC 1.14.13.41) (Tyrosine N-monooxygenase) (Cytochrome P450Tyr) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (at4g39950 : 157.0) Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates.; "cytochrome P450, family 79, subfamily B, polypeptide 2" (CYP79B2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: in 8 processes; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily B, polypeptide 3 (TAIR:AT2G22330.1); Has 28507 Blast hits to 28366 proteins in 1550 species: Archae - 44; Bacteria - 2565; Metazoa - 10705; Fungi - 5395; Plants - 8898; Viruses - 0; Other Eukaryotes - 900 (source: NCBI BLink). & (gnl|cdd|35378 : 106.0) no description available & (gnl|cdd|84486 : 96.9) no description available & (reliability: 310.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T '16.5.1.1.3.2' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.CYP79B3 monooxygenase' 'niben101scf03659_325845-331148' '(at5g05260 : 495.0) Encodes cytochrome P450 CYP79A2.; cytochrome p450 79a2 (CYP79A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene (TAIR:AT5G35917.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o81345|c79b1_sinal : 477.0) Cytochrome P450 79B1 (EC 1.14.-.-) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|35378 : 344.0) no description available & (gnl|cdd|84486 : 225.0) no description available & (reliability: 958.0) & (original description: Putative CYP79D4, Description = Isoleucine N-monooxygenase 2, PFAM = PF00067)' T '16.5.1.1.3.2' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.CYP79B3 monooxygenase' 'niben101scf10232_363045-369488' '(q43135|c79a1_sorbi : 175.0) Cytochrome P450 79A1 (EC 1.14.13.41) (Tyrosine N-monooxygenase) (Cytochrome P450Tyr) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (at5g05260 : 173.0) Encodes cytochrome P450 CYP79A2.; cytochrome p450 79a2 (CYP79A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene (TAIR:AT5G35917.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35378 : 108.0) no description available & (gnl|cdd|84486 : 89.6) no description available & (reliability: 334.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T '16.5.1.1.3.3' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.indole-3-methyl-desulfoglucosinolate sulfotransferase' 'nbv0.3scaffold20471_307-3498' '(gnl|cdd|36797 : 274.0) no description available & (at1g74100 : 266.0) encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with different desulfoglucosinolates, the best substrate is indole-3-methyl-dsGS, followed by benzyl-dsGS. Expression was induced by wounding, jasmonate and ethylene stimulates.; sulfotransferase 16 (SOT16); FUNCTIONS IN: sulfotransferase activity, desulfoglucosinolate sulfotransferase activity; INVOLVED IN: glucosinolate biosynthetic process, response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 17 (TAIR:AT1G18590.1); Has 2855 Blast hits to 2817 proteins in 179 species: Archae - 0; Bacteria - 199; Metazoa - 1686; Fungi - 0; Plants - 534; Viruses - 0; Other Eukaryotes - 436 (source: NCBI BLink). & (gnl|cdd|84950 : 185.0) no description available & (reliability: 532.0) & (original description: Putative SOT6, Description = Cytosolic sulfotransferase 6, PFAM = PF00685)' T '16.5.1.1.3.3' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.indole-3-methyl-desulfoglucosinolate sulfotransferase' 'niben101scf00783_628131-632501' '(gnl|cdd|36797 : 268.0) no description available & (at3g45070 : 223.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: sulfotransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G45080.1); Has 2794 Blast hits to 2750 proteins in 189 species: Archae - 0; Bacteria - 202; Metazoa - 1707; Fungi - 1; Plants - 542; Viruses - 0; Other Eukaryotes - 342 (source: NCBI BLink). & (gnl|cdd|84950 : 197.0) no description available & (reliability: 438.0) & (original description: Putative ST1, Description = Sulfotransferase, PFAM = PF00685)' T '16.5.1.1.3.3' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.indole-3-methyl-desulfoglucosinolate sulfotransferase' 'niben101scf03045_342816-345751' '(gnl|cdd|36797 : 258.0) no description available & (at5g07010 : 210.0) Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).; sulfotransferase 2A (ST2A); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 2B (TAIR:AT5G07000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84950 : 190.0) no description available & (reliability: 386.0) & (original description: Putative PGSC0003DMG400039363, Description = Sulfotransferase, PFAM = PF00685)' T '16.5.1.1.3.3' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.indole-3-methyl-desulfoglucosinolate sulfotransferase' 'niben101scf04231_297861-300898' '(gnl|cdd|36797 : 284.0) no description available & (at5g07010 : 266.0) Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).; sulfotransferase 2A (ST2A); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 2B (TAIR:AT5G07000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84950 : 209.0) no description available & (reliability: 530.0) & (original description: Putative SOT5, Description = Sulfotransferase, PFAM = PF00685)' T '16.5.1.1.3.3' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.indole-3-methyl-desulfoglucosinolate sulfotransferase' 'niben101scf04231_335748-343576' '(gnl|cdd|36797 : 285.0) no description available & (at1g18590 : 280.0) encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with preference with methionine-derived desulfoglucosinolates.; sulfotransferase 17 (SOT17); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: desulfo-glucosinolate sulfotransferase 18 (TAIR:AT1G74090.1); Has 2933 Blast hits to 2889 proteins in 198 species: Archae - 0; Bacteria - 241; Metazoa - 1692; Fungi - 1; Plants - 541; Viruses - 0; Other Eukaryotes - 458 (source: NCBI BLink). & (gnl|cdd|84950 : 209.0) no description available & (reliability: 556.0) & (original description: Putative SOT17, Description = Cytosolic sulfotransferase 17, PFAM = PF00685)' T '16.5.1.1.3.4' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.cytochrome P450 monooxygenase' 'nbv0.3scaffold58668_6674-10668' '(gnl|cdd|35378 : 476.0) no description available & (at4g37370 : 470.0) member of CYP81D; "cytochrome P450, family 81, subfamily D, polypeptide 8" (CYP81D8); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to karrikin; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 3 (TAIR:AT4G37340.1); Has 35915 Blast hits to 35767 proteins in 1837 species: Archae - 61; Bacteria - 5629; Metazoa - 11821; Fungi - 7460; Plants - 9456; Viruses - 3; Other Eukaryotes - 1485 (source: NCBI BLink). & (gnl|cdd|84486 : 306.0) no description available & (q43068|c82a1_pea : 302.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (reliability: 890.0) & (original description: Putative CYP81E1, Description = Isoflavone 2'-hydroxylase, PFAM = PF00067)' T '16.5.1.1.3.4' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.cytochrome P450 monooxygenase' 'niben101scf02427_28989-32949' '(at4g37370 : 469.0) member of CYP81D; "cytochrome P450, family 81, subfamily D, polypeptide 8" (CYP81D8); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to karrikin; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 3 (TAIR:AT4G37340.1); Has 35915 Blast hits to 35767 proteins in 1837 species: Archae - 61; Bacteria - 5629; Metazoa - 11821; Fungi - 7460; Plants - 9456; Viruses - 3; Other Eukaryotes - 1485 (source: NCBI BLink). & (gnl|cdd|35378 : 468.0) no description available & (gnl|cdd|84486 : 304.0) no description available & (q43068|c82a1_pea : 303.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (reliability: 882.0) & (original description: Putative CYP81E1, Description = Isoflavone 2'-hydroxylase, PFAM = PF00067)' T '16.5.1.1.3.4' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.cytochrome P450 monooxygenase' 'niben101scf04995_1183312-1187744' '(gnl|cdd|35378 : 433.0) no description available & (at4g37320 : 423.0) member of CYP81D; "cytochrome P450, family 81, subfamily D, polypeptide 5" (CYP81D5); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 4 (TAIR:AT4G37330.1); Has 34217 Blast hits to 34042 proteins in 1758 species: Archae - 61; Bacteria - 4626; Metazoa - 11716; Fungi - 7014; Plants - 9489; Viruses - 3; Other Eukaryotes - 1308 (source: NCBI BLink). & (gnl|cdd|84486 : 281.0) no description available & (q43068|c82a1_pea : 280.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (reliability: 788.0) & (original description: Putative CYP81E1, Description = Isoflavone 2'-hydroxylase, PFAM = PF00067)' T '16.5.1.1.3.4' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.indole.cytochrome P450 monooxygenase' 'niben101scf07242_744099-749608' '(at4g37370 : 483.0) member of CYP81D; "cytochrome P450, family 81, subfamily D, polypeptide 8" (CYP81D8); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to karrikin; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 3 (TAIR:AT4G37340.1); Has 35915 Blast hits to 35767 proteins in 1837 species: Archae - 61; Bacteria - 5629; Metazoa - 11821; Fungi - 7460; Plants - 9456; Viruses - 3; Other Eukaryotes - 1485 (source: NCBI BLink). & (gnl|cdd|35378 : 461.0) no description available & (q43068|c82a1_pea : 310.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (gnl|cdd|84486 : 278.0) no description available & (reliability: 912.0) & (original description: Putative CYP81F3, Description = Cytochrome P450 81F3, PFAM = PF00067)' T '16.5.1.1.4' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared' '' '' '16.5.1.1.4.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared.CYP83B1 phenylacetaldoxime monooxygenase' 'niben101scf00922_49304-52888' '(gnl|cdd|35378 : 490.0) no description available & (at4g36220 : 333.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (o81973|c93a3_soybn : 331.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 302.0) no description available & (reliability: 620.0) & (original description: Putative CYP9, Description = Cytochrome P450, PFAM = PF00067)' T '16.5.1.1.4.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared.CYP83B1 phenylacetaldoxime monooxygenase' 'niben101scf01813_145590-149660' '(gnl|cdd|35378 : 494.0) no description available & (o81970|c71a9_soybn : 395.0) Cytochrome P450 71A9 (EC 1.14.-.-) (P450 CP1) - Glycine max (Soybean) & (at3g26310 : 347.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 326.0) no description available & (reliability: 654.0) & (original description: Putative CYP10, Description = Cytochrome P450, PFAM = PF00067)' T '16.5.1.1.4.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared.CYP83B1 phenylacetaldoxime monooxygenase' 'niben101scf01813_145620-149681' '(gnl|cdd|35378 : 494.0) no description available & (o81970|c71a9_soybn : 395.0) Cytochrome P450 71A9 (EC 1.14.-.-) (P450 CP1) - Glycine max (Soybean) & (at3g26310 : 347.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 325.0) no description available & (reliability: 654.0) & (original description: Putative CYP10, Description = Cytochrome P450, PFAM = PF00067)' T '16.5.1.1.4.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared.CYP83B1 phenylacetaldoxime monooxygenase' 'niben101scf03193_18703-23405' '(o81974|c71d8_soybn : 503.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 460.0) no description available & (at3g26300 : 363.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 34" (CYP71B34); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 35 (TAIR:AT3G26310.1); Has 33336 Blast hits to 33083 proteins in 1708 species: Archae - 50; Bacteria - 3521; Metazoa - 12043; Fungi - 6985; Plants - 9537; Viruses - 3; Other Eukaryotes - 1197 (source: NCBI BLink). & (gnl|cdd|84486 : 296.0) no description available & (reliability: 654.0) & (original description: Putative CYP71D55, Description = Premnaspirodiene oxygenase, PFAM = PF00067)' T '16.5.1.1.4.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared.CYP83B1 phenylacetaldoxime monooxygenase' 'niben101scf13221_34103-38399' '(gnl|cdd|35378 : 505.0) no description available & (at4g31500 : 495.0) Encodes an oxime-metabolizing enzyme in the biosynthetic pathway of glucosinolates. Is required for phytochrome signal transduction in red light. Mutation confers auxin overproduction.; "cytochrome P450, family 83, subfamily B, polypeptide 1" (CYP83B1); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, oxygen binding; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 83, subfamily A, polypeptide 1 (TAIR:AT4G13770.1); Has 32513 Blast hits to 32256 proteins in 1630 species: Archae - 47; Bacteria - 2956; Metazoa - 11814; Fungi - 7162; Plants - 9504; Viruses - 6; Other Eukaryotes - 1024 (source: NCBI BLink). & (o81970|c71a9_soybn : 441.0) Cytochrome P450 71A9 (EC 1.14.-.-) (P450 CP1) - Glycine max (Soybean) & (gnl|cdd|84486 : 327.0) no description available & (reliability: 990.0) & (original description: Putative c15, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '16.5.1.1.4.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared.CYP83B1 phenylacetaldoxime monooxygenase' 'niben101scf17594_56137-60331' '(gnl|cdd|35378 : 504.0) no description available & (at4g31500 : 472.0) Encodes an oxime-metabolizing enzyme in the biosynthetic pathway of glucosinolates. Is required for phytochrome signal transduction in red light. Mutation confers auxin overproduction.; "cytochrome P450, family 83, subfamily B, polypeptide 1" (CYP83B1); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, oxygen binding; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 83, subfamily A, polypeptide 1 (TAIR:AT4G13770.1); Has 32513 Blast hits to 32256 proteins in 1630 species: Archae - 47; Bacteria - 2956; Metazoa - 11814; Fungi - 7162; Plants - 9504; Viruses - 6; Other Eukaryotes - 1024 (source: NCBI BLink). & (o81970|c71a9_soybn : 419.0) Cytochrome P450 71A9 (EC 1.14.-.-) (P450 CP1) - Glycine max (Soybean) & (gnl|cdd|84486 : 321.0) no description available & (reliability: 944.0) & (original description: Putative c15, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '16.5.1.1.4.2' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared.alkylthiohydroximate C-S lyase' 'nbv0.3scaffold35390_30862-36715' '(gnl|cdd|35480 : 547.0) no description available & (at5g53970 : 481.0) encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment; Tyrosine transaminase family protein; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G36160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30785 : 244.0) no description available & (p52894|ala2_horvu : 80.9) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (reliability: 942.0) & (original description: Putative tat, Description = Tyrosine aminotransferase, PFAM = PF00155)' T '16.5.1.1.4.2' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared.alkylthiohydroximate C-S lyase' 'nbv0.3scaffold94806_486-3915' '(gnl|cdd|35480 : 401.0) no description available & (at5g53970 : 348.0) encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment; Tyrosine transaminase family protein; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G36160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30785 : 153.0) no description available & (reliability: 660.0) & (original description: Putative tat, Description = Tyrosine aminotransferase, PFAM = PF00155)' T '16.5.1.1.4.2' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared.alkylthiohydroximate C-S lyase' 'niben101scf03035_445156-459418' '(gnl|cdd|35480 : 613.0) no description available & (at5g36160 : 513.0) Tyrosine transaminase family protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity; INVOLVED IN: tyrosine catabolic process to phosphoenolpyruvate, cellular amino acid and derivative metabolic process, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G53970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30785 : 217.0) no description available & (p52894|ala2_horvu : 82.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (reliability: 962.0) & (original description: Putative TAT, Description = Tyrosine aminotransferase, PFAM = PF00155)' T '16.5.1.1.4.2' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared.alkylthiohydroximate C-S lyase' 'niben101scf06338_71549-82081' '(gnl|cdd|35480 : 624.0) no description available & (at5g36160 : 552.0) Tyrosine transaminase family protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity; INVOLVED IN: tyrosine catabolic process to phosphoenolpyruvate, cellular amino acid and derivative metabolic process, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G53970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30785 : 228.0) no description available & (reliability: 1022.0) & (original description: Putative TAT, Description = Tyrosine aminotransferase, PFAM = PF00155)' T '16.5.1.1.4.3' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared.UDP-glycosyltransferase' 'nbv0.5scaffold253_418977-421584' '(at2g31790 : 169.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: Uridine diphosphate glycosyltransferase 74E2 (TAIR:AT1G05680.1); Has 8757 Blast hits to 8682 proteins in 575 species: Archae - 0; Bacteria - 847; Metazoa - 2565; Fungi - 65; Plants - 5076; Viruses - 120; Other Eukaryotes - 84 (source: NCBI BLink). & (q41819|iaag_maize : 118.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 89.2) no description available & (reliability: 324.0) & (original description: Putative UGT3, Description = Glycosyltransferase, PFAM = PF00201)' T '16.5.1.1.4.3' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared.UDP-glycosyltransferase' 'niben101scf00661_14430-20858' '(at1g24100 : 469.0) Encodes a UDP-glucose:thiohydroximate S-glucosyltransferase, involved in glucosinolate biosynthesis; UDP-glucosyl transferase 74B1 (UGT74B1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 74 F1 (TAIR:AT2G43840.1); Has 7754 Blast hits to 7677 proteins in 493 species: Archae - 0; Bacteria - 488; Metazoa - 2030; Fungi - 39; Plants - 5027; Viruses - 105; Other Eukaryotes - 65 (source: NCBI BLink). & (q41819|iaag_maize : 334.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 220.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 938.0) & (original description: Putative UGT74B1, Description = UDP-glycosyltransferase 74B1, PFAM = PF00201)' T '16.5.1.2' 'secondary metabolism.sulfur-containing.glucosinolates.regulation' '' '' '16.5.1.2.1' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.aliphatic' 'nbv0.5scaffold4497_21094-63867' '(q7xbh4|myb4_orysa : 152.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 150.0) no description available & (at3g23250 : 149.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative lbm1, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T '16.5.1.2.1' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.aliphatic' 'niben044scf00024853ctg014_9193-11334' '(q7xbh4|myb4_orysa : 153.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 153.0) no description available & (at4g21440 : 152.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative lbm1, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T '16.5.1.2.2' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.aromatic' '' '' '16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'nbv0.3scaffold5927_521-3411' '(gnl|cdd|66392 : 116.0) no description available & (at5g65590 : 113.0) Dof-type zinc finger DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF binding protein 4 (TAIR:AT5G60850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24463|pbf_maize : 106.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 214.0) & (original description: Putative DOF5, Description = DOF domain class transcription factor, PFAM = PF02701)' T '16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'nbv0.3scaffold22028_9440-12015' '(q7xbh4|myb4_orysa : 154.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (at3g23250 : 152.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35271 : 152.0) no description available & (reliability: 278.0) & (original description: Putative myb, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T '16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'nbv0.3scaffold22028_9473-12135' '(at4g21440 : 151.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 147.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 146.0) no description available & (reliability: 280.0) & (original description: Putative lbm1, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T '16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'nbv0.3scaffold60842_6132-8938' '(at5g60850 : 115.0) Encodes a zinc finger protein.; OBF binding protein 4 (OBP4); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DOF zinc finger protein 1 (TAIR:AT1G51700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66392 : 112.0) no description available & (o24463|pbf_maize : 107.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 210.0) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T '16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'nbv0.3scaffold86968_132-3494' '(p10290|mybc_maize : 197.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (at3g13540 : 196.0) Encodes a member of the MYB family of transcriptional regulators. MYB5 act as a negative regulator of trichome branching and play a role in the correct formation of the seed coat and possibly the formation the underlying endosperm layers. Loss of function mutations have defects in seed coat mucilage and columella cells as well as trichome defects (smaller and reduced number of branches).; myb domain protein 5 (MYB5); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 17 (TAIR:AT3G61250.1); Has 8972 Blast hits to 8275 proteins in 512 species: Archae - 0; Bacteria - 0; Metazoa - 834; Fungi - 461; Plants - 5987; Viruses - 3; Other Eukaryotes - 1687 (source: NCBI BLink). & (gnl|cdd|35271 : 182.0) no description available & (reliability: 368.0) & (original description: Putative MYB8, Description = Putative R2R3 MYB protein 8, PFAM = PF00249;PF00249)' T '16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'nbv0.5scaffold39_1180153-1183515' '(at1g22640 : 197.0) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression; myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (p10290|mybc_maize : 196.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (gnl|cdd|35271 : 182.0) no description available & (reliability: 366.0) & (original description: Putative MYB6, Description = MYB6, PFAM = PF00249;PF00249)' T '16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'nbv0.5scaffold4497_21094-63867' '(q7xbh4|myb4_orysa : 152.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 150.0) no description available & (at3g23250 : 149.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative lbm1, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T '16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'niben044scf00000296ctg019_24089-26531' '(at5g60200 : 116.0) Encodes a Dof-type transcription factor.; TARGET OF MONOPTEROS 6 (TMO6); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G45610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66392 : 116.0) no description available & (o24463|pbf_maize : 110.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 210.0) & (original description: Putative DOF6, Description = DOF domain class transcription factor, PFAM = PF02701)' T '16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'niben044scf00005477ctg013_1-2414' '(gnl|cdd|66392 : 109.0) no description available & (at5g62940 : 93.2) HCA2 induces the formation of interfascicular cambium and regulates vascular tissue development in the aerial parts of the plant. Evidence from both gain of function and dominant negative alleles.; HIGH CAMBIAL ACTIVITY2 (HCA2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: TARGET OF MONOPTEROS 6 (TAIR:AT5G60200.1); Has 1915 Blast hits to 1778 proteins in 135 species: Archae - 0; Bacteria - 49; Metazoa - 135; Fungi - 61; Plants - 1116; Viruses - 0; Other Eukaryotes - 554 (source: NCBI BLink). & (o24463|pbf_maize : 89.4) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 173.4) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T '16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'niben044scf00024853ctg014_9193-11334' '(q7xbh4|myb4_orysa : 153.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 153.0) no description available & (at4g21440 : 152.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative lbm1, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T '16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'niben101scf00797_108675-112037' '(at1g22640 : 197.0) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression; myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (p10290|mybc_maize : 197.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (gnl|cdd|35271 : 186.0) no description available & (reliability: 364.0) & (original description: Putative MYB6, Description = MYB6, PFAM = PF00249;PF00249)' T '16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'niben101scf03551_16059-19024' '(gnl|cdd|66392 : 122.0) no description available & (at5g60850 : 112.0) Encodes a zinc finger protein.; OBF binding protein 4 (OBP4); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DOF zinc finger protein 1 (TAIR:AT1G51700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p38564|mnb1a_maize : 103.0) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 208.0) & (original description: Putative dag, Description = Zinc finger, Dof-type, PFAM = PF02701)' T '16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'niben101scf03965_367740-371126' '(p10290|mybc_maize : 195.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (at1g22640 : 193.0) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression; myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (gnl|cdd|35271 : 177.0) no description available & (reliability: 368.0) & (original description: Putative MYB6, Description = MYB6, PFAM = PF00249;PF00249)' T '16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'niben101scf04384_516837-519685' '(gnl|cdd|66392 : 110.0) no description available & (at5g60200 : 106.0) Encodes a Dof-type transcription factor.; TARGET OF MONOPTEROS 6 (TMO6); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G45610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p38564|mnb1a_maize : 103.0) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 204.0) & (original description: Putative Dof6, Description = Dof6 transcription factor, PFAM = PF02701)' T '16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'niben101scf04410_315585-318550' '(gnl|cdd|66392 : 124.0) no description available & (at5g60850 : 112.0) Encodes a zinc finger protein.; OBF binding protein 4 (OBP4); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DOF zinc finger protein 1 (TAIR:AT1G51700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24463|pbf_maize : 103.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 210.0) & (original description: Putative dag, Description = Zinc finger, Dof-type, PFAM = PF02701)' T '16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'niben101scf05998_168194-172107' '(at1g34670 : 201.0) Member of the R2R3 factor gene family.; myb domain protein 93 (MYB93); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 9 (TAIR:AT5G16770.2); Has 9075 Blast hits to 8286 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 899; Fungi - 498; Plants - 5847; Viruses - 6; Other Eukaryotes - 1825 (source: NCBI BLink). & (p20026|myb1_horvu : 186.0) Myb-related protein Hv1 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 186.0) no description available & (reliability: 366.0) & (original description: Putative myb27, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T '16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'niben101scf06793_770279-773169' '(gnl|cdd|66392 : 116.0) no description available & (at5g65590 : 113.0) Dof-type zinc finger DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF binding protein 4 (TAIR:AT5G60850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24463|pbf_maize : 107.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 214.0) & (original description: Putative Dof7, Description = Dof protein, PFAM = PF02701)' T '16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'niben101scf08791_35996-38844' '(gnl|cdd|66392 : 110.0) no description available & (at5g62940 : 93.6) HCA2 induces the formation of interfascicular cambium and regulates vascular tissue development in the aerial parts of the plant. Evidence from both gain of function and dominant negative alleles.; HIGH CAMBIAL ACTIVITY2 (HCA2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: TARGET OF MONOPTEROS 6 (TAIR:AT5G60200.1); Has 1915 Blast hits to 1778 proteins in 135 species: Archae - 0; Bacteria - 49; Metazoa - 135; Fungi - 61; Plants - 1116; Viruses - 0; Other Eukaryotes - 554 (source: NCBI BLink). & (o24463|pbf_maize : 89.7) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 175.6) & (original description: Putative dag, Description = Dof protein, PFAM = PF02701)' T '16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'niben101scf09760_25126-77859' '(q7xbh4|myb4_orysa : 151.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 150.0) no description available & (at3g23250 : 149.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative myb, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T '16.5.1.2.3' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.indole' 'niben101scf34895_33028-36169' '(at3g23250 : 174.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35271 : 172.0) no description available & (q7xbh4|myb4_orysa : 171.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 328.0) & (original description: Putative MYB72, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T '16.5.1.2.4' 'secondary metabolism.sulfur-containing.glucosinolates.regulation.shared' '' '' '16.5.1.3' 'secondary metabolism.sulfur-containing.glucosinolates.degradation' '' '' '16.5.1.3.1' 'secondary metabolism.sulfur-containing.glucosinolates.degradation.myrosinase' '' '' '16.5.1.3.1.1' 'secondary metabolism.sulfur-containing.glucosinolates.degradation.myrosinase.TGG' '' '' '16.5.1.3.2' 'secondary metabolism.sulfur-containing.glucosinolates.degradation.nitrilespecifier protein' '' '' '16.5.1.3.2.1' 'secondary metabolism.sulfur-containing.glucosinolates.degradation.nitrilespecifier protein.epithiospecifier protein' '' '' '16.5.1.3.3' 'secondary metabolism.sulfur-containing.glucosinolates.degradation.nitrilase' 'nbv0.5scaffold148_1014925-1018124' '(q42965|nrl4_tobac : 174.0) Nitrilase 4 (EC 3.5.5.1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36023 : 169.0) no description available & (at5g22300 : 168.0) encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway.; nitrilase 4 (NIT4); CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), Nitrilase/cyanide hydratase, conserved site (InterPro:IPR000132); BEST Arabidopsis thaliana protein match is: nitrilase 3 (TAIR:AT3G44320.1); Has 7653 Blast hits to 7575 proteins in 1747 species: Archae - 162; Bacteria - 5078; Metazoa - 407; Fungi - 539; Plants - 330; Viruses - 11; Other Eukaryotes - 1126 (source: NCBI BLink). & (gnl|cdd|85033 : 97.0) no description available & (reliability: 336.0) & (original description: Putative nIT4, Description = Nitrilase, PFAM = PF00795)' T '16.5.1.3.3' 'secondary metabolism.sulfur-containing.glucosinolates.degradation.nitrilase' 'niben101scf03941_215174-233543' '(q42965|nrl4_tobac : 655.0) Nitrilase 4 (EC 3.5.5.1) - Nicotiana tabacum (Common tobacco) & (at5g22300 : 561.0) encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway.; nitrilase 4 (NIT4); CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), Nitrilase/cyanide hydratase, conserved site (InterPro:IPR000132); BEST Arabidopsis thaliana protein match is: nitrilase 3 (TAIR:AT3G44320.1); Has 7653 Blast hits to 7575 proteins in 1747 species: Archae - 162; Bacteria - 5078; Metazoa - 407; Fungi - 539; Plants - 330; Viruses - 11; Other Eukaryotes - 1126 (source: NCBI BLink). & (gnl|cdd|36023 : 535.0) no description available & (gnl|cdd|85033 : 167.0) no description available & (reliability: 1122.0) & (original description: Putative NIT4A, Description = Bifunctional nitrilase/nitrile hydratase NIT4A, PFAM = PF00795)' T '16.5.1.3.3' 'secondary metabolism.sulfur-containing.glucosinolates.degradation.nitrilase' 'niben101scf09161_190979-201901' '(q42965|nrl4_tobac : 198.0) Nitrilase 4 (EC 3.5.5.1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36023 : 195.0) no description available & (at5g22300 : 186.0) encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway.; nitrilase 4 (NIT4); CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), Nitrilase/cyanide hydratase, conserved site (InterPro:IPR000132); BEST Arabidopsis thaliana protein match is: nitrilase 3 (TAIR:AT3G44320.1); Has 7653 Blast hits to 7575 proteins in 1747 species: Archae - 162; Bacteria - 5078; Metazoa - 407; Fungi - 539; Plants - 330; Viruses - 11; Other Eukaryotes - 1126 (source: NCBI BLink). & (gnl|cdd|85033 : 103.0) no description available & (reliability: 372.0) & (original description: Putative nIT4, Description = Nitrilase, PFAM = PF00795)' T '16.5.1.4' 'secondary metabolism.sulfur-containing.glucosinolates.transport' '' '' '16.5.1.4.1' 'secondary metabolism.sulfur-containing.glucosinolates.transport.aliphatic' 'niben101scf01729_39830-46983' '(at4g22840 : 436.0) Sodium Bile acid symporter family; FUNCTIONS IN: transporter activity, bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657); BEST Arabidopsis thaliana protein match is: bile acid transporter 5 (TAIR:AT4G12030.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37929 : 213.0) no description available & (gnl|cdd|30734 : 155.0) no description available & (reliability: 850.0) & (original description: Putative BASS5, Description = Probable sodium/metabolite cotransporter BASS5, chloroplastic, PFAM = PF01758)' T '16.5.99' 'secondary metabolism.sulfur-containing.misc' '' '' '16.5.99.1' 'secondary metabolism.sulfur-containing.misc.alliinase' 'nbv0.3scaffold26602_1291-9061' '(gnl|cdd|68439 : 470.0) no description available & (at4g24670 : 452.0) Encodes a protein with similarity to the TAA1 trytophan aminotransferase involved in IAA biosynthesis. Double mutant analyses suggest that this protein is involved in regulating many aspects of plant growth and development from embryogenesis to flower formation and plays a role in ethylene-mediated signaling.; tryptophan aminotransferase related 2 (TAR2); FUNCTIONS IN: L-tryptophan:2-oxoglutarate aminotransferase activity, carbon-sulfur lyase activity, L-tryptophan:pyruvate aminotransferase activity; INVOLVED IN: in 12 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Allinase, C-terminal (InterPro:IPR006948); BEST Arabidopsis thaliana protein match is: tryptophan aminotransferase related 1 (TAIR:AT1G23320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 904.0) & (original description: Putative TAR2, Description = Tryptophan aminotransferase-related protein 2, PFAM = PF04864)' T '16.5.99.1' 'secondary metabolism.sulfur-containing.misc.alliinase' 'nbv0.3scaffold96610_425-2718' '(at1g34060 : 206.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: carbon-sulfur lyase activity, pyridoxal phosphate binding, catalytic activity; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), EGF-like, alliinase (InterPro:IPR006947), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Allinase, C-terminal (InterPro:IPR006948), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G34040.1); Has 224 Blast hits to 224 proteins in 37 species: Archae - 6; Bacteria - 13; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|68439 : 143.0) no description available & (reliability: 412.0) & (original description: Putative ALL1, Description = Tryptophan aminotransferase-related protein 4, PFAM = PF04864;PF04863)' T '16.5.99.1' 'secondary metabolism.sulfur-containing.misc.alliinase' 'nbv0.3scaffold96610_624-4330' '(gnl|cdd|68439 : 229.0) no description available & (at1g34060 : 206.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: carbon-sulfur lyase activity, pyridoxal phosphate binding, catalytic activity; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), EGF-like, alliinase (InterPro:IPR006947), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Allinase, C-terminal (InterPro:IPR006948), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G34040.1); Has 224 Blast hits to 224 proteins in 37 species: Archae - 6; Bacteria - 13; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative ALL1, Description = Alliinase, PFAM = PF04864)' T '16.5.99.1' 'secondary metabolism.sulfur-containing.misc.alliinase' 'niben101scf00650_171507-177196' '(gnl|cdd|68439 : 468.0) no description available & (at1g70560 : 450.0) TAA1 is involved in the shade-induced production of indole-3-pyruvate (IPA), a precursor to IAA, a biologically active auxin. It is also involved in regulating many aspects of plant growth and development from embryogenesis to flower formation and plays a role in ethylene-mediated signaling. This enzyme can catalyze the formation of IPA from L-tryptophan. Though L-Trp is expected to be the preferred substrate in vivo, TAA1 also acts as an aminotransferase using L-Phe, L-Tyr, L-Leu, L-Ala, L-Met, and L-Gln.; tryptophan aminotransferase of Arabidopsis 1 (TAA1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Allinase, C-terminal (InterPro:IPR006948), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: tryptophan aminotransferase related 1 (TAIR:AT1G23320.1); Has 469 Blast hits to 469 proteins in 134 species: Archae - 44; Bacteria - 178; Metazoa - 0; Fungi - 0; Plants - 199; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 900.0) & (original description: Putative TAA1, Description = L-tryptophan--pyruvate aminotransferase 1, PFAM = PF04864)' T '16.5.99.1' 'secondary metabolism.sulfur-containing.misc.alliinase' 'niben101scf01578_577467-588190' '(gnl|cdd|68439 : 417.0) no description available & (at1g34040 : 416.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, carbon-sulfur lyase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), EGF-like, alliinase (InterPro:IPR006947), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Allinase, C-terminal (InterPro:IPR006948), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G34060.1); Has 290 Blast hits to 290 proteins in 68 species: Archae - 8; Bacteria - 67; Metazoa - 0; Fungi - 6; Plants - 199; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 832.0) & (original description: Putative TAR4, Description = Tryptophan aminotransferase-related protein 4, PFAM = PF04864;PF04863)' T '16.5.99.1' 'secondary metabolism.sulfur-containing.misc.alliinase' 'niben101scf04641_270181-276509' '(at1g34060 : 500.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: carbon-sulfur lyase activity, pyridoxal phosphate binding, catalytic activity; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), EGF-like, alliinase (InterPro:IPR006947), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Allinase, C-terminal (InterPro:IPR006948), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G34040.1); Has 224 Blast hits to 224 proteins in 37 species: Archae - 6; Bacteria - 13; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|68439 : 464.0) no description available & (reliability: 1000.0) & (original description: Putative TAR4, Description = Tryptophan aminotransferase-related protein 4, PFAM = PF04863;PF04864)' T '16.5.99.1' 'secondary metabolism.sulfur-containing.misc.alliinase' 'niben101scf04641_272604-276310' '(gnl|cdd|68439 : 240.0) no description available & (at1g34060 : 221.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: carbon-sulfur lyase activity, pyridoxal phosphate binding, catalytic activity; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), EGF-like, alliinase (InterPro:IPR006947), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Allinase, C-terminal (InterPro:IPR006948), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G34040.1); Has 224 Blast hits to 224 proteins in 37 species: Archae - 6; Bacteria - 13; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative ALL1, Description = Alliinase, PFAM = PF04864)' T '16.5.99.1' 'secondary metabolism.sulfur-containing.misc.alliinase' 'niben101scf07793_263563-273535' '(gnl|cdd|68439 : 470.0) no description available & (at4g24670 : 454.0) Encodes a protein with similarity to the TAA1 trytophan aminotransferase involved in IAA biosynthesis. Double mutant analyses suggest that this protein is involved in regulating many aspects of plant growth and development from embryogenesis to flower formation and plays a role in ethylene-mediated signaling.; tryptophan aminotransferase related 2 (TAR2); FUNCTIONS IN: L-tryptophan:2-oxoglutarate aminotransferase activity, carbon-sulfur lyase activity, L-tryptophan:pyruvate aminotransferase activity; INVOLVED IN: in 12 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Allinase, C-terminal (InterPro:IPR006948); BEST Arabidopsis thaliana protein match is: tryptophan aminotransferase related 1 (TAIR:AT1G23320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 908.0) & (original description: Putative TAR2, Description = Tryptophan aminotransferase-related protein 2, PFAM = PF04864)' T '16.5.99.1' 'secondary metabolism.sulfur-containing.misc.alliinase' 'niben101scf10162_228826-235029' '(gnl|cdd|68439 : 467.0) no description available & (at1g70560 : 452.0) TAA1 is involved in the shade-induced production of indole-3-pyruvate (IPA), a precursor to IAA, a biologically active auxin. It is also involved in regulating many aspects of plant growth and development from embryogenesis to flower formation and plays a role in ethylene-mediated signaling. This enzyme can catalyze the formation of IPA from L-tryptophan. Though L-Trp is expected to be the preferred substrate in vivo, TAA1 also acts as an aminotransferase using L-Phe, L-Tyr, L-Leu, L-Ala, L-Met, and L-Gln.; tryptophan aminotransferase of Arabidopsis 1 (TAA1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Allinase, C-terminal (InterPro:IPR006948), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: tryptophan aminotransferase related 1 (TAIR:AT1G23320.1); Has 469 Blast hits to 469 proteins in 134 species: Archae - 44; Bacteria - 178; Metazoa - 0; Fungi - 0; Plants - 199; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 904.0) & (original description: Putative TAA1, Description = L-tryptophan--pyruvate aminotransferase 1, PFAM = PF04864)' T '16.7' 'secondary metabolism.wax' 'nbv0.3scaffold21854_25143-30319' '(at1g67730 : 446.0) Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene.; beta-ketoacyl reductase 1 (KCR1); FUNCTIONS IN: oxidoreductase activity, ketoreductase activity, acetoacetyl-CoA reductase activity; INVOLVED IN: very long-chain fatty acid biosynthetic process, embryo development, cuticle development; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: beta-ketoacyl reductase 2 (TAIR:AT1G24470.1); Has 86831 Blast hits to 86679 proteins in 3373 species: Archae - 739; Bacteria - 59178; Metazoa - 5127; Fungi - 3946; Plants - 2216; Viruses - 0; Other Eukaryotes - 15625 (source: NCBI BLink). & (gnl|cdd|36232 : 285.0) no description available & (gnl|cdd|30648 : 183.0) no description available & (reliability: 892.0) & (original description: Putative KCR1, Description = Very-long-chain 3-oxoacyl-CoA reductase 1, PFAM = PF00106)' T '16.7' 'secondary metabolism.wax' 'nbv0.3scaffold37035_2137-5959' '(at1g02205 : 372.0) Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined.; ECERIFERUM 1 (CER1); FUNCTIONS IN: aldehyde decarbonylase activity; INVOLVED IN: aldehyde catabolic process, wax biosynthetic process, cuticle development; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02190.1). & (reliability: 744.0) & (original description: Putative CER1, Description = Protein WAX2, PFAM = PF12076)' T '16.7' 'secondary metabolism.wax' 'nbv0.3scaffold57354_3762-7625' '(at5g57800 : 328.0) encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis.; ECERIFERUM 3 (CER3); FUNCTIONS IN: oxidoreductase activity, binding, iron ion binding, catalytic activity; INVOLVED IN: cuticle hydrocarbon biosynthetic process, response to salt stress, pollen sperm cell differentiation, wax biosynthetic process, cuticle development; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02205.2); Has 879 Blast hits to 877 proteins in 232 species: Archae - 0; Bacteria - 279; Metazoa - 24; Fungi - 149; Plants - 340; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative gl1, Description = Protein WAX2, PFAM = PF04116)' T '16.7' 'secondary metabolism.wax' 'nbv0.5scaffold1705_333162-338489' '(at1g04220 : 454.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 359.0) no description available & (reliability: 854.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T '16.7' 'secondary metabolism.wax' 'nbv0.5scaffold2673_86214-96400' '(at1g02205 : 771.0) Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined.; ECERIFERUM 1 (CER1); FUNCTIONS IN: aldehyde decarbonylase activity; INVOLVED IN: aldehyde catabolic process, wax biosynthetic process, cuticle development; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02190.1). & (reliability: 1542.0) & (original description: Putative CER1, Description = Protein ECERIFERUM 1, PFAM = PF04116;PF12076)' T '16.7' 'secondary metabolism.wax' 'niben044scf00000319ctg001_1-3255' '(at1g19440 : 932.0) Encodes KCS4, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 4 (KCS4); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: very long-chain fatty acid metabolic process, cuticle development; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 9 (TAIR:AT2G16280.1); Has 4090 Blast hits to 4073 proteins in 972 species: Archae - 0; Bacteria - 1351; Metazoa - 0; Fungi - 9; Plants - 2623; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|87517 : 548.0) no description available & (reliability: 1864.0) & (original description: Putative KCS4, Description = 3-ketoacyl-CoA synthase 4, PFAM = PF08392;PF08541)' T '16.7' 'secondary metabolism.wax' 'niben044scf00000506ctg010_3073-13501' '(at1g02205 : 562.0) Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined.; ECERIFERUM 1 (CER1); FUNCTIONS IN: aldehyde decarbonylase activity; INVOLVED IN: aldehyde catabolic process, wax biosynthetic process, cuticle development; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02190.1). & (reliability: 1124.0) & (original description: Putative BnaC03g20880D, Description = BnaC03g20880D protein, PFAM = PF12076;PF04116)' T '16.7' 'secondary metabolism.wax' 'niben044scf00011365ctg005_4159-7908' '(at5g57800 : 288.0) encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis.; ECERIFERUM 3 (CER3); FUNCTIONS IN: oxidoreductase activity, binding, iron ion binding, catalytic activity; INVOLVED IN: cuticle hydrocarbon biosynthetic process, response to salt stress, pollen sperm cell differentiation, wax biosynthetic process, cuticle development; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02205.2); Has 879 Blast hits to 877 proteins in 232 species: Archae - 0; Bacteria - 279; Metazoa - 24; Fungi - 149; Plants - 340; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 576.0) & (original description: Putative gl1, Description = Protein WAX2, PFAM = PF04116)' T '16.7' 'secondary metabolism.wax' 'niben044scf00044912ctg007_1-9678' '(at1g04220 : 642.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 441.0) no description available & (reliability: 1164.0) & (original description: Putative KCS2, Description = 3-ketoacyl-CoA synthase 2, PFAM = PF08392;PF08541)' T '16.7' 'secondary metabolism.wax' 'niben101scf00046_693940-703693' '(at1g67730 : 454.0) Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene.; beta-ketoacyl reductase 1 (KCR1); FUNCTIONS IN: oxidoreductase activity, ketoreductase activity, acetoacetyl-CoA reductase activity; INVOLVED IN: very long-chain fatty acid biosynthetic process, embryo development, cuticle development; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: beta-ketoacyl reductase 2 (TAIR:AT1G24470.1); Has 86831 Blast hits to 86679 proteins in 3373 species: Archae - 739; Bacteria - 59178; Metazoa - 5127; Fungi - 3946; Plants - 2216; Viruses - 0; Other Eukaryotes - 15625 (source: NCBI BLink). & (gnl|cdd|36232 : 279.0) no description available & (gnl|cdd|30648 : 178.0) no description available & (reliability: 908.0) & (original description: Putative KCR1, Description = Very-long-chain 3-oxoacyl-CoA reductase 1, PFAM = PF00106)' T '16.7' 'secondary metabolism.wax' 'niben101scf00753_313928-319183' '(at1g68530 : 781.0) Encodes KCS6, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 6 (KCS6); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: in 7 processes; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 5 (TAIR:AT1G25450.1); Has 1620 Blast hits to 1616 proteins in 389 species: Archae - 0; Bacteria - 691; Metazoa - 0; Fungi - 0; Plants - 849; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|87517 : 481.0) no description available & (reliability: 1562.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08392;PF08541)' T '16.7' 'secondary metabolism.wax' 'niben101scf00753_326309-329038' '(at1g68530 : 816.0) Encodes KCS6, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 6 (KCS6); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: in 7 processes; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 5 (TAIR:AT1G25450.1); Has 1620 Blast hits to 1616 proteins in 389 species: Archae - 0; Bacteria - 691; Metazoa - 0; Fungi - 0; Plants - 849; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|87517 : 494.0) no description available & (reliability: 1632.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08392;PF08541)' T '16.7' 'secondary metabolism.wax' 'niben101scf01211_441047-453581' '(at1g02205 : 740.0) Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined.; ECERIFERUM 1 (CER1); FUNCTIONS IN: aldehyde decarbonylase activity; INVOLVED IN: aldehyde catabolic process, wax biosynthetic process, cuticle development; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02190.1). & (reliability: 1480.0) & (original description: Putative CER1, Description = Protein ECERIFERUM 1, PFAM = PF04116;PF12076)' T '16.7' 'secondary metabolism.wax' 'niben101scf02156_6261-16830' '(at1g68530 : 907.0) Encodes KCS6, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 6 (KCS6); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: in 7 processes; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 5 (TAIR:AT1G25450.1); Has 1620 Blast hits to 1616 proteins in 389 species: Archae - 0; Bacteria - 691; Metazoa - 0; Fungi - 0; Plants - 849; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|87517 : 509.0) no description available & (reliability: 1814.0) & (original description: Putative KCS4, Description = 3-ketoacyl-CoA synthase 4, PFAM = PF08392;PF08541)' T '16.7' 'secondary metabolism.wax' 'niben101scf02240_496777-503637' '(at1g02205 : 782.0) Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined.; ECERIFERUM 1 (CER1); FUNCTIONS IN: aldehyde decarbonylase activity; INVOLVED IN: aldehyde catabolic process, wax biosynthetic process, cuticle development; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02190.1). & (reliability: 1564.0) & (original description: Putative Sb04g036940, Description = Putative uncharacterized protein Sb04g036940, PFAM = PF04116;PF12076)' T '16.7' 'secondary metabolism.wax' 'niben101scf02955_633262-636620' '(at1g68530 : 453.0) Encodes KCS6, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 6 (KCS6); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: in 7 processes; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 5 (TAIR:AT1G25450.1); Has 1620 Blast hits to 1616 proteins in 389 species: Archae - 0; Bacteria - 691; Metazoa - 0; Fungi - 0; Plants - 849; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|87517 : 392.0) no description available & (reliability: 906.0) & (original description: Putative KCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T '16.7' 'secondary metabolism.wax' 'niben101scf03045_40756-52984' '(at1g67730 : 337.0) Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene.; beta-ketoacyl reductase 1 (KCR1); FUNCTIONS IN: oxidoreductase activity, ketoreductase activity, acetoacetyl-CoA reductase activity; INVOLVED IN: very long-chain fatty acid biosynthetic process, embryo development, cuticle development; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: beta-ketoacyl reductase 2 (TAIR:AT1G24470.1); Has 86831 Blast hits to 86679 proteins in 3373 species: Archae - 739; Bacteria - 59178; Metazoa - 5127; Fungi - 3946; Plants - 2216; Viruses - 0; Other Eukaryotes - 15625 (source: NCBI BLink). & (gnl|cdd|36232 : 266.0) no description available & (gnl|cdd|30648 : 168.0) no description available & (reliability: 674.0) & (original description: Putative KCR1, Description = Very-long-chain 3-oxoacyl-CoA reductase 1, PFAM = PF00106)' T '16.7' 'secondary metabolism.wax' 'niben101scf03107_171716-174768' '(at3g51970 : 229.0) acyl-CoA sterol acyl transferase 1 (ASAT1); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Wax synthase (InterPro:IPR017088); BEST Arabidopsis thaliana protein match is: MBOAT (membrane bound O-acyl transferase) family protein (TAIR:AT5G55350.1); Has 801 Blast hits to 791 proteins in 235 species: Archae - 0; Bacteria - 473; Metazoa - 0; Fungi - 36; Plants - 238; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative AT3, Description = Acyltransferase, putative, PFAM = PF13813)' T '16.7' 'secondary metabolism.wax' 'niben101scf03437_133378-141029' '(at5g57800 : 857.0) encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis.; ECERIFERUM 3 (CER3); FUNCTIONS IN: oxidoreductase activity, binding, iron ion binding, catalytic activity; INVOLVED IN: cuticle hydrocarbon biosynthetic process, response to salt stress, pollen sperm cell differentiation, wax biosynthetic process, cuticle development; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02205.2); Has 879 Blast hits to 877 proteins in 232 species: Archae - 0; Bacteria - 279; Metazoa - 24; Fungi - 149; Plants - 340; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 1714.0) & (original description: Putative CER3, Description = Protein ECERIFERUM 3, PFAM = PF04116;PF12076)' T '16.7' 'secondary metabolism.wax' 'niben101scf03953_75385-78938' '(at1g19440 : 854.0) Encodes KCS4, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 4 (KCS4); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: very long-chain fatty acid metabolic process, cuticle development; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 9 (TAIR:AT2G16280.1); Has 4090 Blast hits to 4073 proteins in 972 species: Archae - 0; Bacteria - 1351; Metazoa - 0; Fungi - 9; Plants - 2623; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|87517 : 529.0) no description available & (reliability: 1708.0) & (original description: Putative KCS16, Description = 3-ketoacyl-CoA synthase 16, PFAM = PF08541;PF08392)' T '16.7' 'secondary metabolism.wax' 'niben101scf04063_10208-31310' '(at1g24470 : 348.0) Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene.; beta-ketoacyl reductase 2 (KCR2); FUNCTIONS IN: oxidoreductase activity, ketoreductase activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: beta-ketoacyl reductase 1 (TAIR:AT1G67730.1); Has 80088 Blast hits to 80001 proteins in 3265 species: Archae - 726; Bacteria - 55481; Metazoa - 4714; Fungi - 3206; Plants - 2039; Viruses - 0; Other Eukaryotes - 13922 (source: NCBI BLink). & (gnl|cdd|36232 : 239.0) no description available & (gnl|cdd|30648 : 156.0) no description available & (reliability: 646.0) & (original description: Putative KCR2, Description = Very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470, PFAM = PF00106)' T '16.7' 'secondary metabolism.wax' 'niben101scf04082_46852-50926' '(at1g04220 : 640.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 438.0) no description available & (reliability: 1174.0) & (original description: Putative afi, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T '16.7' 'secondary metabolism.wax' 'niben101scf04113_1271115-1274662' '(at1g19440 : 932.0) Encodes KCS4, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 4 (KCS4); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: very long-chain fatty acid metabolic process, cuticle development; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 9 (TAIR:AT2G16280.1); Has 4090 Blast hits to 4073 proteins in 972 species: Archae - 0; Bacteria - 1351; Metazoa - 0; Fungi - 9; Plants - 2623; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|87517 : 548.0) no description available & (reliability: 1864.0) & (original description: Putative KCS4, Description = 3-ketoacyl-CoA synthase 4, PFAM = PF08392;PF08541)' T '16.7' 'secondary metabolism.wax' 'niben101scf04301_280718-313074' '(at1g02205 : 777.0) Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined.; ECERIFERUM 1 (CER1); FUNCTIONS IN: aldehyde decarbonylase activity; INVOLVED IN: aldehyde catabolic process, wax biosynthetic process, cuticle development; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02190.1). & (reliability: 1554.0) & (original description: Putative CER1, Description = Protein ECERIFERUM 1, PFAM = PF04116;PF12076)' T '16.7' 'secondary metabolism.wax' 'niben101scf04655_517658-521205' '(at1g19440 : 907.0) Encodes KCS4, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 4 (KCS4); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: very long-chain fatty acid metabolic process, cuticle development; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 9 (TAIR:AT2G16280.1); Has 4090 Blast hits to 4073 proteins in 972 species: Archae - 0; Bacteria - 1351; Metazoa - 0; Fungi - 9; Plants - 2623; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|87517 : 525.0) no description available & (reliability: 1814.0) & (original description: Putative afi, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T '16.7' 'secondary metabolism.wax' 'niben101scf05109_53374-63275' '(at5g57800 : 829.0) encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis.; ECERIFERUM 3 (CER3); FUNCTIONS IN: oxidoreductase activity, binding, iron ion binding, catalytic activity; INVOLVED IN: cuticle hydrocarbon biosynthetic process, response to salt stress, pollen sperm cell differentiation, wax biosynthetic process, cuticle development; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02205.2); Has 879 Blast hits to 877 proteins in 232 species: Archae - 0; Bacteria - 279; Metazoa - 24; Fungi - 149; Plants - 340; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 1658.0) & (original description: Putative CER3, Description = Protein ECERIFERUM 3, PFAM = PF12076;PF04116)' T '16.7' 'secondary metabolism.wax' 'niben101scf06371_20238-35436' '(at5g57800 : 489.0) encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis.; ECERIFERUM 3 (CER3); FUNCTIONS IN: oxidoreductase activity, binding, iron ion binding, catalytic activity; INVOLVED IN: cuticle hydrocarbon biosynthetic process, response to salt stress, pollen sperm cell differentiation, wax biosynthetic process, cuticle development; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02205.2); Has 879 Blast hits to 877 proteins in 232 species: Archae - 0; Bacteria - 279; Metazoa - 24; Fungi - 149; Plants - 340; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 978.0) & (original description: Putative CER3, Description = Protein WAX2, PFAM = PF04116;PF12076)' T '16.7' 'secondary metabolism.wax' 'niben101scf08128_12522-20365' '(at1g02205 : 720.0) Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined.; ECERIFERUM 1 (CER1); FUNCTIONS IN: aldehyde decarbonylase activity; INVOLVED IN: aldehyde catabolic process, wax biosynthetic process, cuticle development; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02190.1). & (reliability: 1440.0) & (original description: Putative At2g37700, Description = Protein CER1-like 2, PFAM = PF04116;PF12076)' T '16.7' 'secondary metabolism.wax' 'niben101scf08351_412362-416895' '(at1g04220 : 430.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 368.0) no description available & (reliability: 816.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T '16.7' 'secondary metabolism.wax' 'niben101scf08351_466175-472362' '(at1g04220 : 442.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 359.0) no description available & (reliability: 844.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T '16.7' 'secondary metabolism.wax' 'niben101scf08470_28730-32608' '(at1g04220 : 613.0) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 2 (KCS2); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to wounding, response to osmotic stress, suberin biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 20 (TAIR:AT5G43760.1); Has 5259 Blast hits to 5241 proteins in 1449 species: Archae - 0; Bacteria - 2406; Metazoa - 0; Fungi - 4; Plants - 2679; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|87517 : 433.0) no description available & (reliability: 1112.0) & (original description: Putative afi, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T '16.7' 'secondary metabolism.wax' 'niben101scf08526_1752-5359' '(at2g16280 : 360.0) Encodes KCS9, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 9 (KCS9); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: response to cold, response to light stimulus, very long-chain fatty acid metabolic process, response to osmotic stress, cuticle development; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 4 (TAIR:AT1G19440.1); Has 4705 Blast hits to 4688 proteins in 1155 species: Archae - 0; Bacteria - 1679; Metazoa - 0; Fungi - 8; Plants - 2880; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|87517 : 344.0) no description available & (reliability: 720.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08541;PF08392)' T '16.7' 'secondary metabolism.wax' 'niben101scf10780_9827-13615' '(at1g68530 : 893.0) Encodes KCS6, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 6 (KCS6); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: in 7 processes; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 5 (TAIR:AT1G25450.1); Has 1620 Blast hits to 1616 proteins in 389 species: Archae - 0; Bacteria - 691; Metazoa - 0; Fungi - 0; Plants - 849; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|87517 : 498.0) no description available & (reliability: 1786.0) & (original description: Putative CUT1, Description = 3-ketoacyl-CoA synthase 6, PFAM = PF08392;PF08541)' T '16.7' 'secondary metabolism.wax' 'niben101scf10780_10208-12903' '(gnl|cdd|87517 : 374.0) no description available & (at1g68530 : 370.0) Encodes KCS6, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 6 (KCS6); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: in 7 processes; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 5 (TAIR:AT1G25450.1); Has 1620 Blast hits to 1616 proteins in 389 species: Archae - 0; Bacteria - 691; Metazoa - 0; Fungi - 0; Plants - 849; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 740.0) & (original description: Putative ddKCS, Description = 3-ketoacyl-CoA synthase, PFAM = PF08392)' T '16.7' 'secondary metabolism.wax' 'niben101scf17024_26306-37896' '(at1g02205 : 738.0) Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined.; ECERIFERUM 1 (CER1); FUNCTIONS IN: aldehyde decarbonylase activity; INVOLVED IN: aldehyde catabolic process, wax biosynthetic process, cuticle development; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02190.1). & (reliability: 1476.0) & (original description: Putative CER1, Description = Protein WAX2, PFAM = PF12076;PF04116)' T '16.7' 'secondary metabolism.wax' 'niben101scf17380_3130-11353' '(at1g02205 : 682.0) Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined.; ECERIFERUM 1 (CER1); FUNCTIONS IN: aldehyde decarbonylase activity; INVOLVED IN: aldehyde catabolic process, wax biosynthetic process, cuticle development; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02190.1). & (reliability: 1364.0) & (original description: Putative CER1, Description = Protein ECERIFERUM 1, PFAM = PF12076;PF04116)' T '16.7' 'secondary metabolism.wax' 'niben101scf22589_39149-56209' '(at5g57800 : 887.0) encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis.; ECERIFERUM 3 (CER3); FUNCTIONS IN: oxidoreductase activity, binding, iron ion binding, catalytic activity; INVOLVED IN: cuticle hydrocarbon biosynthetic process, response to salt stress, pollen sperm cell differentiation, wax biosynthetic process, cuticle development; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02205.2); Has 879 Blast hits to 877 proteins in 232 species: Archae - 0; Bacteria - 279; Metazoa - 24; Fungi - 149; Plants - 340; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 1774.0) & (original description: Putative CER3, Description = Protein ECERIFERUM 3, PFAM = PF12076;PF04116)' T '16.7' 'secondary metabolism.wax' 'niben101scf28488_1747-4802' '(at3g51970 : 253.0) acyl-CoA sterol acyl transferase 1 (ASAT1); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Wax synthase (InterPro:IPR017088); BEST Arabidopsis thaliana protein match is: MBOAT (membrane bound O-acyl transferase) family protein (TAIR:AT5G55350.1); Has 801 Blast hits to 791 proteins in 235 species: Archae - 0; Bacteria - 473; Metazoa - 0; Fungi - 36; Plants - 238; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative ASAT1, Description = Acyl-CoA--sterol O-acyltransferase 1, PFAM = PF13813)' T '16.7.1001' 'secondary metabolism.wax' 'pentadecane' 'secondary metabolism, waxes' M '16.8' 'secondary metabolism.flavonoids' '' '' '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'nbv0.3scaffold19408_29148-34378' '(gnl|cdd|35365 : 211.0) no description available & (gnl|cdd|33294 : 177.0) no description available & (at3g11180 : 140.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 132.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 280.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'nbv0.3scaffold87126_2420-5796' '(at4g27570 : 441.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: N-terminal protein myristoylation, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G27560.1); Has 4908 Blast hits to 4874 proteins in 244 species: Archae - 0; Bacteria - 41; Metazoa - 215; Fungi - 17; Plants - 4624; Viruses - 3; Other Eukaryotes - 8 (source: NCBI BLink). & (q43716|ufog_pethy : 347.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 151.0) no description available & (reliability: 882.0) & (original description: Putative 3GGT, Description = Anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase, PFAM = PF00201)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'nbv0.5scaffold2034_18323-21310' '(q43716|ufog_pethy : 452.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (at5g54060 : 154.0) UDP-glucose:flavonoid 3-o-glucosyltransferase (UF3GT); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: N-terminal protein myristoylation, response to sucrose stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G54010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative GTR1, Description = Glucosyl-transferase, PFAM = )' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'nbv0.5scaffold2660_12923-16449' '(at5g49690 : 222.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 214.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 173.0) no description available & (gnl|cdd|32004 : 95.9) no description available & (reliability: 400.0) & (original description: Putative UGT94E5, Description = Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase, PFAM = PF00201)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'nbv0.5scaffold8936_6060-8424' '(at2g22590 : 157.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 5420 Blast hits to 5242 proteins in 247 species: Archae - 0; Bacteria - 62; Metazoa - 299; Fungi - 20; Plants - 5019; Viruses - 2; Other Eukaryotes - 18 (source: NCBI BLink). & (q43716|ufog_pethy : 108.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 92.7) no description available & (reliability: 314.0) & (original description: Putative GT4, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben044scf00017324ctg011_1129-3995' '(at5g65550 : 187.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 179.0) no description available & (q43716|ufog_pethy : 171.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|79510 : 90.8) no description available & (reliability: 360.0) & (original description: Putative UGT94E2, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben044scf00024963ctg007_9728-15569' '(at5g05600 : 493.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: response to salt stress, response to karrikin; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G11180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35365 : 352.0) no description available & (p51091|ldox_maldo : 220.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 173.0) no description available & (reliability: 986.0) & (original description: Putative fls2, Description = Flavonol synthase 2, PFAM = PF03171;PF14226)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben044scf00028622ctg003_3721-7247' '(at5g49690 : 230.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 216.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 180.0) no description available & (gnl|cdd|32004 : 92.0) no description available & (reliability: 416.0) & (original description: Putative UGAT, Description = Cyanidin-3-O-glucoside 2-O-glucuronosyltransferase, PFAM = PF00201)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben044scf00048655ctg006_13616-15094' '(at2g22590 : 100.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 5420 Blast hits to 5242 proteins in 247 species: Archae - 0; Bacteria - 62; Metazoa - 299; Fungi - 20; Plants - 5019; Viruses - 2; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative PGSC0003DMG400000059, Description = Putative UDP-rhamnose:rhamnosyltransferase 1, PFAM = )' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf00113_700552-703958' '(q43716|ufog_pethy : 854.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (at5g54010 : 342.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G53990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 170.0) no description available & (reliability: 628.0) & (original description: Putative RT, Description = Anthocyanidin 3-O-glucosyltransferase, PFAM = PF00201)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf00173_639793-643259' '(at5g49690 : 467.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 270.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 175.0) no description available & (gnl|cdd|32004 : 91.3) no description available & (reliability: 914.0) & (original description: Putative UGT91D1, Description = UDP-glycosyltransferase 91D1, PFAM = PF00201)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf00348_1055793-1059187' '(at5g01210 : 600.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT2G39980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 304.0) no description available & (o24645|hcbt1_diaca : 104.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1130.0) & (original description: Putative AT3, Description = Anthocyanin 5-aromatic acyltransferase, PFAM = PF02458)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf00561_15643-22376' '(at2g22590 : 454.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 5420 Blast hits to 5242 proteins in 247 species: Archae - 0; Bacteria - 62; Metazoa - 299; Fungi - 20; Plants - 5019; Viruses - 2; Other Eukaryotes - 18 (source: NCBI BLink). & (q43716|ufog_pethy : 225.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 156.0) no description available & (gnl|cdd|79510 : 86.5) no description available & (reliability: 908.0) & (original description: Putative upa11, Description = Putative anthocyanidine rhamnosyl-transferase, PFAM = PF00201)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf00571_706171-710265' '(at1g55290 : 498.0) encodes a protein whose sequence is similar to oxidoreductase, 2OG-Fe(II) oxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G13610.1); Has 8871 Blast hits to 8831 proteins in 1013 species: Archae - 0; Bacteria - 1149; Metazoa - 118; Fungi - 1068; Plants - 4986; Viruses - 0; Other Eukaryotes - 1550 (source: NCBI BLink). & (gnl|cdd|35365 : 287.0) no description available & (o04847|dv4h_catro : 186.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|33294 : 185.0) no description available & (reliability: 996.0) & (original description: Putative F6'H2, Description = Feruloyl CoA ortho-hydroxylase 2, PFAM = PF03171;PF14226)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf00902_625380-632032' '(at2g39980 : 639.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G01210.1); Has 2459 Blast hits to 2362 proteins in 147 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 105; Plants - 2350; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|66174 : 319.0) no description available & (o24645|hcbt1_diaca : 100.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1278.0) & (original description: Putative AT3, Description = Anthocyanin 5-aromatic acyltransferase, PFAM = PF02458)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf01227_356839-359438' '(at2g39980 : 239.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G01210.1); Has 2459 Blast hits to 2362 proteins in 147 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 105; Plants - 2350; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|66174 : 157.0) no description available & (reliability: 478.0) & (original description: Putative AT3, Description = HXXXD-type acyl-transferase family protein, PFAM = PF02458)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf01383_776990-781565' '(at3g13610 : 381.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G55290.1); Has 8779 Blast hits to 8731 proteins in 1013 species: Archae - 0; Bacteria - 1145; Metazoa - 121; Fungi - 1057; Plants - 4989; Viruses - 0; Other Eukaryotes - 1467 (source: NCBI BLink). & (gnl|cdd|35365 : 236.0) no description available & (gnl|cdd|33294 : 171.0) no description available & (o04847|dv4h_catro : 155.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 722.0) & (original description: Putative F6'H1, Description = Feruloyl CoA ortho-hydroxylase 1, PFAM = PF14226;PF03171)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf01383_913368-923370' '(at1g55290 : 348.0) encodes a protein whose sequence is similar to oxidoreductase, 2OG-Fe(II) oxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G13610.1); Has 8871 Blast hits to 8831 proteins in 1013 species: Archae - 0; Bacteria - 1149; Metazoa - 118; Fungi - 1068; Plants - 4986; Viruses - 0; Other Eukaryotes - 1550 (source: NCBI BLink). & (gnl|cdd|35365 : 278.0) no description available & (gnl|cdd|33294 : 168.0) no description available & (q41452|fls_soltu : 167.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Solanum tuberosum (Potato) & (reliability: 696.0) & (original description: Putative BnaC02g04300D, Description = BnaC02g04300D protein, PFAM = PF03171;PF14226)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf01834_526259-531246' '(at5g65550 : 183.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 177.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 136.0) no description available & (gnl|cdd|79510 : 80.0) no description available & (reliability: 332.0) & (original description: Putative bfgt1, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf02034_521008-528748' '(at5g05600 : 503.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: response to salt stress, response to karrikin; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G11180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35365 : 360.0) no description available & (p51091|ldox_maldo : 226.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 178.0) no description available & (reliability: 1006.0) & (original description: Putative FLS, Description = Flavonol synthase, PFAM = PF03171;PF14226)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf02085_1410883-1415996' '(at3g55970 : 457.0) jasmonate-regulated gene 21 (JRG21); FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1); Has 8809 Blast hits to 8750 proteins in 1005 species: Archae - 0; Bacteria - 1115; Metazoa - 109; Fungi - 1073; Plants - 4993; Viruses - 0; Other Eukaryotes - 1519 (source: NCBI BLink). & (gnl|cdd|35365 : 355.0) no description available & (p51091|ldox_maldo : 246.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 175.0) no description available & (reliability: 914.0) & (original description: Putative OXR1, Description = Oxidoreductase, PFAM = PF03171;PF14226)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf02173_27164-30032' '(q43716|ufog_pethy : 854.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (at5g54010 : 342.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G53990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 163.0) no description available & (reliability: 624.0) & (original description: Putative rt, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf02280_596612-600021' '(at2g39980 : 632.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G01210.1); Has 2459 Blast hits to 2362 proteins in 147 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 105; Plants - 2350; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|66174 : 328.0) no description available & (o24645|hcbt1_diaca : 96.7) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1264.0) & (original description: Putative AT3, Description = Anthocyanin 5-aromatic acyltransferase, PFAM = PF02458)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf02294_200653-204056' '(at5g49690 : 340.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 210.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 154.0) no description available & (gnl|cdd|79510 : 80.4) no description available & (reliability: 676.0) & (original description: Putative UGT91M1, Description = UDP-glycosyltransferase, PFAM = PF00201)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf02337_127789-132207' '(gnl|cdd|35365 : 210.0) no description available & (gnl|cdd|33294 : 178.0) no description available & (at3g11180 : 138.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 136.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 276.0) & (original description: Putative GA7ox1, Description = Flavonol synthase/flavanone 3-hydroxylase, PFAM = PF14226;PF03171)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf02399_206049-209452' '(at2g22590 : 491.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 5420 Blast hits to 5242 proteins in 247 species: Archae - 0; Bacteria - 62; Metazoa - 299; Fungi - 20; Plants - 5019; Viruses - 2; Other Eukaryotes - 18 (source: NCBI BLink). & (q43716|ufog_pethy : 220.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 170.0) no description available & (gnl|cdd|32004 : 92.4) no description available & (reliability: 982.0) & (original description: Putative UGT91A1, Description = UDP-glycosyltransferase 91A1, PFAM = PF00201)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf02500_89803-94725' '(at1g55290 : 298.0) encodes a protein whose sequence is similar to oxidoreductase, 2OG-Fe(II) oxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G13610.1); Has 8871 Blast hits to 8831 proteins in 1013 species: Archae - 0; Bacteria - 1149; Metazoa - 118; Fungi - 1068; Plants - 4986; Viruses - 0; Other Eukaryotes - 1550 (source: NCBI BLink). & (gnl|cdd|35365 : 190.0) no description available & (o04847|dv4h_catro : 130.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|33294 : 125.0) no description available & (reliability: 596.0) & (original description: Putative Diox2, Description = Leucoanthocyanidin dioxygenase, putative, PFAM = PF03171)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf03108_1039041-1042438' '(at2g22590 : 509.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 5420 Blast hits to 5242 proteins in 247 species: Archae - 0; Bacteria - 62; Metazoa - 299; Fungi - 20; Plants - 5019; Viruses - 2; Other Eukaryotes - 18 (source: NCBI BLink). & (q43716|ufog_pethy : 233.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 172.0) no description available & (gnl|cdd|79510 : 94.2) no description available & (reliability: 1018.0) & (original description: Putative UGT91A1, Description = UDP-glycosyltransferase 91A1, PFAM = PF00201)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf03108_1534900-1538343' '(at5g65550 : 478.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 238.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 191.0) no description available & (gnl|cdd|79510 : 99.6) no description available & (reliability: 942.0) & (original description: Putative GT4, Description = Putative UDP-rhamnose:rhamnosyltransferase 1, PFAM = PF00201)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf03108_1547854-1549890' '(at2g22590 : 259.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 5420 Blast hits to 5242 proteins in 247 species: Archae - 0; Bacteria - 62; Metazoa - 299; Fungi - 20; Plants - 5019; Viruses - 2; Other Eukaryotes - 18 (source: NCBI BLink). & (q43716|ufog_pethy : 137.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 111.0) no description available & (gnl|cdd|79510 : 91.2) no description available & (reliability: 518.0) & (original description: Putative upa11, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf03427_1143726-1147102' '(at4g27570 : 440.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: N-terminal protein myristoylation, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G27560.1); Has 4908 Blast hits to 4874 proteins in 244 species: Archae - 0; Bacteria - 41; Metazoa - 215; Fungi - 17; Plants - 4624; Viruses - 3; Other Eukaryotes - 8 (source: NCBI BLink). & (q43716|ufog_pethy : 351.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 150.0) no description available & (reliability: 880.0) & (original description: Putative 3GGT, Description = Anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase, PFAM = PF00201)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf03590_173893-177150' '(gnl|cdd|35365 : 207.0) no description available & (gnl|cdd|33294 : 177.0) no description available & (at5g08640 : 138.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o48882|acco2_maldo : 128.0) 1-aminocyclopropane-1-carboxylate oxidase 2 (EC 1.14.17.4) (ACC oxidase 2) (Ethylene-forming enzyme) (EFE) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 272.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf03779_388149-393543' '(at5g05600 : 486.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: response to salt stress, response to karrikin; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G11180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35365 : 348.0) no description available & (p51091|ldox_maldo : 229.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 166.0) no description available & (reliability: 972.0) & (original description: Putative fls2, Description = Flavonol synthase 2, PFAM = PF03171;PF14226)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf04118_391216-395681' '(at3g13610 : 481.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G55290.1); Has 8779 Blast hits to 8731 proteins in 1013 species: Archae - 0; Bacteria - 1145; Metazoa - 121; Fungi - 1057; Plants - 4989; Viruses - 0; Other Eukaryotes - 1467 (source: NCBI BLink). & (gnl|cdd|35365 : 286.0) no description available & (o04847|dv4h_catro : 189.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|33294 : 177.0) no description available & (reliability: 944.0) & (original description: Putative F6'H1, Description = Feruloyl CoA ortho-hydroxylase 1, PFAM = PF14226;PF03171)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf04290_222702-226624' '(gnl|cdd|35365 : 213.0) no description available & (gnl|cdd|33294 : 174.0) no description available & (at2g30830 : 134.0) encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G30840.1); Has 8436 Blast hits to 8403 proteins in 1008 species: Archae - 0; Bacteria - 1171; Metazoa - 115; Fungi - 900; Plants - 4884; Viruses - 0; Other Eukaryotes - 1366 (source: NCBI BLink). & (q08506|acco1_pethy : 119.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 258.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf04742_203399-208840' '(at1g55290 : 356.0) encodes a protein whose sequence is similar to oxidoreductase, 2OG-Fe(II) oxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G13610.1); Has 8871 Blast hits to 8831 proteins in 1013 species: Archae - 0; Bacteria - 1149; Metazoa - 118; Fungi - 1068; Plants - 4986; Viruses - 0; Other Eukaryotes - 1550 (source: NCBI BLink). & (gnl|cdd|35365 : 274.0) no description available & (q41452|fls_soltu : 163.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Solanum tuberosum (Potato) & (gnl|cdd|33294 : 163.0) no description available & (reliability: 712.0) & (original description: Putative F6'H2, Description = Feruloyl CoA ortho-hydroxylase 2, PFAM = PF03171;PF14226)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf04871_603755-607182' '(at5g49690 : 319.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 208.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 160.0) no description available & (reliability: 624.0) & (original description: Putative UGT91Q1, Description = UDP-glycosyltransferase 91Q1, PFAM = PF00201)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf04871_712186-715589' '(at5g49690 : 292.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 172.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 156.0) no description available & (reliability: 568.0) & (original description: Putative GT4, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf07115_34791-39547' '(gnl|cdd|35365 : 208.0) no description available & (gnl|cdd|33294 : 176.0) no description available & (at3g11180 : 139.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 130.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 278.0) & (original description: Putative glysoja_034856, Description = Gibberellin 2-beta-dioxygenase 8, PFAM = PF03171;PF14226)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf07241_34095-37486' '(at2g22590 : 310.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 5420 Blast hits to 5242 proteins in 247 species: Archae - 0; Bacteria - 62; Metazoa - 299; Fungi - 20; Plants - 5019; Viruses - 2; Other Eukaryotes - 18 (source: NCBI BLink). & (q43716|ufog_pethy : 182.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 155.0) no description available & (reliability: 620.0) & (original description: Putative upa11, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf08724_497483-501995' '(gnl|cdd|35365 : 209.0) no description available & (gnl|cdd|33294 : 168.0) no description available & (at3g11180 : 139.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (o04847|dv4h_catro : 122.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 278.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf10502_68689-72582' '(at1g55290 : 453.0) encodes a protein whose sequence is similar to oxidoreductase, 2OG-Fe(II) oxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G13610.1); Has 8871 Blast hits to 8831 proteins in 1013 species: Archae - 0; Bacteria - 1149; Metazoa - 118; Fungi - 1068; Plants - 4986; Viruses - 0; Other Eukaryotes - 1550 (source: NCBI BLink). & (gnl|cdd|35365 : 284.0) no description available & (o04847|dv4h_catro : 186.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|33294 : 170.0) no description available & (reliability: 906.0) & (original description: Putative F6'H1, Description = Feruloyl CoA ortho-hydroxylase 1, PFAM = PF14226;PF03171)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf10671_31679-34844' '(gnl|cdd|35365 : 197.0) no description available & (gnl|cdd|33294 : 133.0) no description available & (at5g08640 : 128.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o04847|dv4h_catro : 121.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 236.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf11705_1746-6350' '(at5g05600 : 434.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: response to salt stress, response to karrikin; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G11180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35365 : 346.0) no description available & (p51091|ldox_maldo : 230.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 168.0) no description available & (reliability: 868.0) & (original description: Putative OXR1, Description = Oxidoreductase, PFAM = PF14226;PF03171)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf11705_186084-190697' '(at2g38240 : 449.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to salt stress; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1); Has 8819 Blast hits to 8740 proteins in 1012 species: Archae - 0; Bacteria - 1137; Metazoa - 112; Fungi - 1067; Plants - 5036; Viruses - 0; Other Eukaryotes - 1467 (source: NCBI BLink). & (gnl|cdd|35365 : 353.0) no description available & (p51091|ldox_maldo : 261.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 174.0) no description available & (reliability: 898.0) & (original description: Putative ANS, Description = Leucoanthocyanidin dioxygenase, PFAM = PF03171;PF14226)' T '16.8.1' 'secondary metabolism.flavonoids.anthocyanins' 'niben101scf22015_169431-209731' '(at5g49690 : 250.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 171.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 114.0) no description available & (reliability: 482.0) & (original description: Putative GT4, Description = Putative UDP-rhamnose:rhamnosyltransferase 1, PFAM = )' T '16.8.1.1' 'secondary metabolism.flavonoids.anthocyanins.leucocyanidin dioxygenase' '' '' '16.8.1.2' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin reductase' 'nbv0.3scaffold14384_32574-38965' '(gnl|cdd|36715 : 224.0) no description available & (p14720|dfra_pethy : 178.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Petunia hybrida (Petunia) & (at4g27250 : 164.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: cinnamyl-alcohol dehydrogenase activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: dihydroflavonol 4-reductase (TAIR:AT5G42800.1). & (gnl|cdd|30800 : 85.4) no description available & (reliability: 324.0) & (original description: Putative hm2, Description = NADPH HC toxin reductase, PFAM = PF01370)' T '16.8.1.2' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin reductase' 'niben101scf00817_385825-398191' '(gnl|cdd|36715 : 227.0) no description available & (at4g27250 : 176.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: cinnamyl-alcohol dehydrogenase activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: dihydroflavonol 4-reductase (TAIR:AT5G42800.1). & (p14720|dfra_pethy : 163.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Petunia hybrida (Petunia) & (gnl|cdd|30800 : 89.3) no description available & (reliability: 324.0) & (original description: Putative hm2, Description = NADPH HC toxin reductase, PFAM = PF01370)' T '16.8.1.2' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin reductase' 'niben101scf03694_107501-112320' '(at1g61720 : 395.0) Negative regulator of flavonoid biosynthesis, mutants accumulate flavonoid pigments in their seed coat, putative oxidoreductase. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium.; BANYULS (BAN); FUNCTIONS IN: oxidoreductase activity, anthocyanidin reductase activity; INVOLVED IN: negative regulation of flavonoid biosynthetic process; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: C globular stage, seed development stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: dihydroflavonol 4-reductase (TAIR:AT5G42800.1); Has 9654 Blast hits to 9641 proteins in 1549 species: Archae - 92; Bacteria - 3374; Metazoa - 271; Fungi - 951; Plants - 2463; Viruses - 15; Other Eukaryotes - 2488 (source: NCBI BLink). & (gnl|cdd|36715 : 327.0) no description available & (p51110|dfra_vitvi : 277.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (gnl|cdd|30800 : 118.0) no description available & (reliability: 790.0) & (original description: Putative ban, Description = Anthocyanidin reductase, PFAM = PF01370)' T '16.8.1.2' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin reductase' 'niben101scf08321_217955-237076' '(gnl|cdd|36715 : 219.0) no description available & (at1g61720 : 157.0) Negative regulator of flavonoid biosynthesis, mutants accumulate flavonoid pigments in their seed coat, putative oxidoreductase. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium.; BANYULS (BAN); FUNCTIONS IN: oxidoreductase activity, anthocyanidin reductase activity; INVOLVED IN: negative regulation of flavonoid biosynthetic process; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: C globular stage, seed development stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: dihydroflavonol 4-reductase (TAIR:AT5G42800.1); Has 9654 Blast hits to 9641 proteins in 1549 species: Archae - 92; Bacteria - 3374; Metazoa - 271; Fungi - 951; Plants - 2463; Viruses - 15; Other Eukaryotes - 2488 (source: NCBI BLink). & (p14720|dfra_pethy : 153.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Petunia hybrida (Petunia) & (gnl|cdd|30800 : 91.2) no description available & (reliability: 314.0) & (original description: Putative hm2, Description = NADPH HC toxin reductase, PFAM = PF01370)' T '16.8.1.10' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-methyltransferase' '' '' '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'nbv0.5scaffold2129_320350-326010' '(at2g18570 : 157.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G18560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 156.0) no description available & (q43716|ufog_pethy : 145.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (reliability: 304.0) & (original description: Putative NSGT1, Description = Truncated non-smoky glycosyltransferase 1, PFAM = PF08268;PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'nbv0.5scaffold2660_12923-16449' '(at5g49690 : 222.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 214.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 173.0) no description available & (gnl|cdd|32004 : 95.9) no description available & (reliability: 444.0) & (original description: Putative UGT94E5, Description = Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase, PFAM = PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'nbv0.5scaffold8936_6060-8424' '(at2g22590 : 157.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 5420 Blast hits to 5242 proteins in 247 species: Archae - 0; Bacteria - 62; Metazoa - 299; Fungi - 20; Plants - 5019; Viruses - 2; Other Eukaryotes - 18 (source: NCBI BLink). & (q43716|ufog_pethy : 108.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 92.7) no description available & (reliability: 294.0) & (original description: Putative GT4, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben044scf00000867ctg025_743-4116' '(at5g49690 : 163.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 129.0) no description available & (p56725|zox_phavu : 119.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 326.0) & (original description: Putative UFGT, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben044scf00002317ctg006_11986-15758' '(at5g49690 : 543.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 248.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 192.0) no description available & (gnl|cdd|79510 : 98.5) no description available & (reliability: 1086.0) & (original description: Putative UGT91C1, Description = UDP-glycosyltransferase 91C1, PFAM = PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben044scf00004370ctg009_8007-10858' '(at5g65550 : 179.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 168.0) no description available & (q43716|ufog_pethy : 147.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|32004 : 82.4) no description available & (reliability: 358.0) & (original description: Putative UFGT, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben044scf00007578ctg015_10313-13671' '(at5g49690 : 206.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 186.0) no description available & (q43716|ufog_pethy : 182.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|79510 : 93.9) no description available & (reliability: 412.0) & (original description: Putative UGT94E5, Description = Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase, PFAM = PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben044scf00017324ctg011_1129-3995' '(at5g65550 : 187.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 179.0) no description available & (q43716|ufog_pethy : 171.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|79510 : 90.8) no description available & (reliability: 374.0) & (original description: Putative UGT94E2, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben044scf00028492ctg004_10894-14427' '(at5g49690 : 214.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 202.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 180.0) no description available & (gnl|cdd|32004 : 85.9) no description available & (reliability: 428.0) & (original description: Putative UGT94E5, Description = Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase, PFAM = PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben044scf00028622ctg003_3721-7247' '(at5g49690 : 230.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 216.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 180.0) no description available & (gnl|cdd|32004 : 92.0) no description available & (reliability: 460.0) & (original description: Putative UGAT, Description = Cyanidin-3-O-glucoside 2-O-glucuronosyltransferase, PFAM = PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben044scf00048655ctg006_13616-15094' '(at2g22590 : 100.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 5420 Blast hits to 5242 proteins in 247 species: Archae - 0; Bacteria - 62; Metazoa - 299; Fungi - 20; Plants - 5019; Viruses - 2; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative PGSC0003DMG400000059, Description = Putative UDP-rhamnose:rhamnosyltransferase 1, PFAM = )' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf00077_916279-993057' '(at5g65550 : 186.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 162.0) no description available & (q43716|ufog_pethy : 159.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|32004 : 81.3) no description available & (reliability: 372.0) & (original description: Putative bfgt1, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf00173_639793-643259' '(at5g49690 : 467.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 270.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 175.0) no description available & (gnl|cdd|32004 : 91.3) no description available & (reliability: 934.0) & (original description: Putative UGT91D1, Description = UDP-glycosyltransferase 91D1, PFAM = PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf00539_233406-236779' '(at5g49690 : 222.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 195.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 189.0) no description available & (gnl|cdd|32004 : 94.3) no description available & (reliability: 444.0) & (original description: Putative UFGT, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf01124_2409012-2412373' '(at5g49690 : 206.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 181.0) no description available & (q43716|ufog_pethy : 180.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|79510 : 86.9) no description available & (reliability: 412.0) & (original description: Putative CsUGT134, Description = UDP-glycosyltransferase 94P1, PFAM = PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf01395_65319-68734' '(at5g49690 : 543.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 246.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 190.0) no description available & (gnl|cdd|79510 : 97.3) no description available & (reliability: 1086.0) & (original description: Putative UGT91C1, Description = UDP-glycosyltransferase 91C1, PFAM = PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf01763_82416-85828' '(at5g49690 : 205.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 185.0) no description available & (q43716|ufog_pethy : 182.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|79510 : 95.8) no description available & (reliability: 410.0) & (original description: Putative UGT94E5, Description = Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase, PFAM = PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf01834_526259-531246' '(at5g65550 : 183.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 177.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 136.0) no description available & (gnl|cdd|79510 : 80.0) no description available & (reliability: 366.0) & (original description: Putative bfgt1, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf02294_200653-204056' '(at5g49690 : 340.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 210.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 154.0) no description available & (gnl|cdd|79510 : 80.4) no description available & (reliability: 680.0) & (original description: Putative UGT91M1, Description = UDP-glycosyltransferase, PFAM = PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf02752_1027658-1031004' '(at5g65550 : 216.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 173.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 168.0) no description available & (gnl|cdd|79510 : 86.1) no description available & (reliability: 432.0) & (original description: Putative bfgt1, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf03108_1534900-1538343' '(at5g65550 : 478.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 238.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 191.0) no description available & (gnl|cdd|79510 : 99.6) no description available & (reliability: 956.0) & (original description: Putative GT4, Description = Putative UDP-rhamnose:rhamnosyltransferase 1, PFAM = PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf03438_284329-287675' '(at5g65550 : 184.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 161.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 160.0) no description available & (reliability: 368.0) & (original description: Putative UGT94E5, Description = Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase, PFAM = PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf04871_603755-607182' '(at5g49690 : 319.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 208.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 160.0) no description available & (reliability: 638.0) & (original description: Putative UGT91Q1, Description = UDP-glycosyltransferase 91Q1, PFAM = PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf04871_712186-715589' '(at5g49690 : 292.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 172.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 156.0) no description available & (reliability: 584.0) & (original description: Putative GT4, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf06846_455173-458501' '(at5g49690 : 225.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 194.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 186.0) no description available & (gnl|cdd|79510 : 87.3) no description available & (reliability: 450.0) & (original description: Putative UGAT, Description = Cyanidin-3-O-glucoside 2-O-glucuronosyltransferase, PFAM = PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf07241_34095-37486' '(at2g22590 : 310.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 5420 Blast hits to 5242 proteins in 247 species: Archae - 0; Bacteria - 62; Metazoa - 299; Fungi - 20; Plants - 5019; Viruses - 2; Other Eukaryotes - 18 (source: NCBI BLink). & (q43716|ufog_pethy : 182.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 155.0) no description available & (reliability: 586.0) & (original description: Putative upa11, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf09184_306997-312657' '(gnl|cdd|36406 : 158.0) no description available & (at2g18570 : 157.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G18560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q43716|ufog_pethy : 145.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (reliability: 302.0) & (original description: Putative bfgt1, Description = Glycosyltransferase, PFAM = PF08268;PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf17597_151847-155154' '(gnl|cdd|36406 : 170.0) no description available & (at4g34131 : 162.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43716|ufog_pethy : 142.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|32004 : 83.2) no description available & (reliability: 314.0) & (original description: Putative NSGT1, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf17612_266218-269591' '(at5g49690 : 245.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 226.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 180.0) no description available & (gnl|cdd|32004 : 89.7) no description available & (reliability: 490.0) & (original description: Putative C12RT1, Description = Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase, PFAM = PF00201)' T '16.8.1.12' 'secondary metabolism.flavonoids.anthocyanins.anthocyanidin 3-O-glucosyltransferase' 'niben101scf22015_169431-209731' '(at5g49690 : 250.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 171.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 114.0) no description available & (reliability: 500.0) & (original description: Putative GT4, Description = Putative UDP-rhamnose:rhamnosyltransferase 1, PFAM = )' T '16.8.1.21' 'secondary metabolism.flavonoids.anthocyanins.anthocyanin 5-aromatic acyltransferase' 'niben044scf00061802ctg001_167-3620' '(at5g39090 : 233.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G39050.1); Has 2059 Blast hits to 2043 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 23; Plants - 2033; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|66174 : 154.0) no description available & (reliability: 466.0) & (original description: Putative mat1, Description = Chloramphenicol acetyltransferase-like domain-containing protein, PFAM = PF02458)' T '16.8.1.21' 'secondary metabolism.flavonoids.anthocyanins.anthocyanin 5-aromatic acyltransferase' 'niben101scf00905_179725-182480' '(at1g03495 : 141.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G03940.1); Has 1920 Blast hits to 1905 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 18; Plants - 1900; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative mat1, Description = Chloramphenicol acetyltransferase-like domain-containing protein, PFAM = PF02458)' T '16.8.1.21' 'secondary metabolism.flavonoids.anthocyanins.anthocyanin 5-aromatic acyltransferase' 'niben101scf02869_1043504-1046859' '(at1g03940 : 239.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G03495.1); Has 1873 Blast hits to 1858 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 18; Plants - 1853; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|66174 : 154.0) no description available & (reliability: 478.0) & (original description: Putative mat1, Description = Malonyltransferase, PFAM = PF02458)' T '16.8.1.21' 'secondary metabolism.flavonoids.anthocyanins.anthocyanin 5-aromatic acyltransferase' 'niben101scf15007_45229-48590' '(at5g39090 : 231.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G39050.1); Has 2059 Blast hits to 2043 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 23; Plants - 2033; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|66174 : 149.0) no description available & (reliability: 462.0) & (original description: Putative mat1, Description = Malonyltransferase, PFAM = PF02458)' T '16.8.1.1001' 'secondary metabolism.flavonoids.anthocyanins' 'lycopine' 'secondary metabolism, anthocyanin' M '16.8.2' 'secondary metabolism.flavonoids.chalcones' 'nbv0.3scaffold9474_41108-44591' '(at1g02050 : 579.0) LESS ADHESIVE POLLEN 6 (LAP6); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: phenylpropanoid biosynthetic process, pollen exine formation; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Thiolase-like, subgroup (InterPro:IPR016038), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT4G00040.1); Has 6482 Blast hits to 6477 proteins in 1606 species: Archae - 0; Bacteria - 2500; Metazoa - 0; Fungi - 67; Plants - 3666; Viruses - 0; Other Eukaryotes - 249 (source: NCBI BLink). & (gnl|cdd|29418 : 358.0) no description available & (p06515|chsy_antma : 295.0) Chalcone synthase (EC 2.3.1.74) (Naringenin-chalcone synthase) - Antirrhinum majus (Garden snapdragon) & (reliability: 1158.0) & (original description: Putative PKSA, Description = Type III polyketide synthase A, PFAM = PF00195;PF02797)' T '16.8.2' 'secondary metabolism.flavonoids.chalcones' 'nbv0.5scaffold2239_293929-298014' '(at5g05270 : 238.0) Chalcone-flavanone isomerase family protein; FUNCTIONS IN: intramolecular lyase activity, chalcone isomerase activity; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT3G55120.1); Has 361 Blast hits to 360 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 358; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|66148 : 97.3) no description available & (reliability: 476.0) & (original description: Putative CHI2, Description = Chalcone-flavonone isomerase family protein, PFAM = PF02431)' T '16.8.2' 'secondary metabolism.flavonoids.chalcones' 'niben101scf00135_37426-42390' '(at4g34850 : 649.0) LESS ADHESIVE POLLEN 5 (LAP5); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: phenylpropanoid biosynthetic process, pollen exine formation; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, sepal, anther, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Thiolase-like, subgroup (InterPro:IPR016038), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT1G02050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29418 : 364.0) no description available & (q43188|chs2_soltu : 324.0) Chalcone synthase 2 (EC 2.3.1.74) (Naringenin-chalcone synthase 2) - Solanum tuberosum (Potato) & (reliability: 1298.0) & (original description: Putative PKSB, Description = Type III polyketide synthase B, PFAM = PF00195;PF02797)' T '16.8.2' 'secondary metabolism.flavonoids.chalcones' 'niben101scf00586_42581-54795' '(at2g37790 : 512.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G37770.2); Has 24755 Blast hits to 24730 proteins in 2482 species: Archae - 413; Bacteria - 16802; Metazoa - 2096; Fungi - 1772; Plants - 1239; Viruses - 0; Other Eukaryotes - 2433 (source: NCBI BLink). & (gnl|cdd|36790 : 391.0) no description available & (gnl|cdd|84642 : 313.0) no description available & (q7g764|nado1_orysa : 253.0) Probable NAD(P)H-dependent oxidoreductase 1 (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 936.0) & (original description: Putative ar1, Description = Aldo-keto reductase family 4 member C9, PFAM = PF00248)' T '16.8.2' 'secondary metabolism.flavonoids.chalcones' 'niben101scf01983_150023-156094' '(at1g53520 : 271.0) Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT3G55120.1); Has 396 Blast hits to 396 proteins in 76 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 2; Plants - 376; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 542.0) & (original description: Putative FAP3, Description = Fatty-acid-binding protein 3, chloroplastic, PFAM = PF02431)' T '16.8.2' 'secondary metabolism.flavonoids.chalcones' 'niben101scf04082_218632-228946' '(q7g764|nado1_orysa : 333.0) Probable NAD(P)H-dependent oxidoreductase 1 (EC 1.1.1.-) - Oryza sativa (Rice) & (at1g59960 : 331.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to salt stress; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G59950.1); Has 18939 Blast hits to 18918 proteins in 2314 species: Archae - 331; Bacteria - 12289; Metazoa - 1736; Fungi - 1658; Plants - 1296; Viruses - 0; Other Eukaryotes - 1629 (source: NCBI BLink). & (gnl|cdd|36790 : 318.0) no description available & (gnl|cdd|84642 : 302.0) no description available & (reliability: 662.0) & (original description: Putative cor, Description = Putative NAD(P)H-dependent oxidoreductase 1, PFAM = PF00248)' T '16.8.2' 'secondary metabolism.flavonoids.chalcones' 'niben101scf04563_76533-84707' '(gnl|cdd|36790 : 314.0) no description available & (at1g59960 : 306.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to salt stress; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G59950.1); Has 18939 Blast hits to 18918 proteins in 2314 species: Archae - 331; Bacteria - 12289; Metazoa - 1736; Fungi - 1658; Plants - 1296; Viruses - 0; Other Eukaryotes - 1629 (source: NCBI BLink). & (q7g764|nado1_orysa : 305.0) Probable NAD(P)H-dependent oxidoreductase 1 (EC 1.1.1.-) - Oryza sativa (Rice) & (gnl|cdd|84642 : 291.0) no description available & (reliability: 612.0) & (original description: Putative GALUR, Description = D-galacturonate reductase, PFAM = PF00248)' T '16.8.2' 'secondary metabolism.flavonoids.chalcones' 'niben101scf04741_485629-489748' '(at1g53520 : 273.0) Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT3G55120.1); Has 396 Blast hits to 396 proteins in 76 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 2; Plants - 376; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 546.0) & (original description: Putative chi3, Description = Chalcone-flavonone isomerase family protein, PFAM = PF02431)' T '16.8.2' 'secondary metabolism.flavonoids.chalcones' 'niben101scf09575_186657-189932' '(at1g02050 : 572.0) LESS ADHESIVE POLLEN 6 (LAP6); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: phenylpropanoid biosynthetic process, pollen exine formation; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Thiolase-like, subgroup (InterPro:IPR016038), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT4G00040.1); Has 6482 Blast hits to 6477 proteins in 1606 species: Archae - 0; Bacteria - 2500; Metazoa - 0; Fungi - 67; Plants - 3666; Viruses - 0; Other Eukaryotes - 249 (source: NCBI BLink). & (gnl|cdd|29418 : 357.0) no description available & (p06515|chsy_antma : 292.0) Chalcone synthase (EC 2.3.1.74) (Naringenin-chalcone synthase) - Antirrhinum majus (Garden snapdragon) & (reliability: 1144.0) & (original description: Putative PKSA, Description = Type III polyketide synthase A, PFAM = PF02797;PF00195)' T '16.8.2' 'secondary metabolism.flavonoids.chalcones' 'niben101scf09597_5814-9380' '(gnl|cdd|36790 : 197.0) no description available & (gnl|cdd|84642 : 188.0) no description available & (at1g59960 : 187.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to salt stress; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G59950.1); Has 18939 Blast hits to 18918 proteins in 2314 species: Archae - 331; Bacteria - 12289; Metazoa - 1736; Fungi - 1658; Plants - 1296; Viruses - 0; Other Eukaryotes - 1629 (source: NCBI BLink). & (p26690|6dcs_soybn : 184.0) NAD(P)H-dependent 6'-deoxychalcone synthase (EC 2.3.1.170) - Glycine max (Soybean) & (reliability: 374.0) & (original description: Putative cor, Description = Putative NAD(P)H-dependent oxidoreductase 1, PFAM = PF00248)' T '16.8.2' 'secondary metabolism.flavonoids.chalcones' 'niben101scf23113_65709-69794' '(at5g05270 : 238.0) Chalcone-flavanone isomerase family protein; FUNCTIONS IN: intramolecular lyase activity, chalcone isomerase activity; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT3G55120.1); Has 361 Blast hits to 360 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 358; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|66148 : 97.3) no description available & (reliability: 476.0) & (original description: Putative CHI3, Description = Probable chalcone--flavonone isomerase 3, PFAM = PF02431)' T '16.8.2.1' 'secondary metabolism.flavonoids.chalcones.naringenin-chalcone synthase' 'niben044scf00007558ctg003_2660-6405' '(q43188|chs2_soltu : 773.0) Chalcone synthase 2 (EC 2.3.1.74) (Naringenin-chalcone synthase 2) - Solanum tuberosum (Potato) & (at5g13930 : 691.0) Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids. Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism.; TRANSPARENT TESTA 4 (TT4); FUNCTIONS IN: naringenin-chalcone synthase activity; INVOLVED IN: in 11 processes; LOCATED IN: plant-type vacuole membrane, endoplasmic reticulum, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Chalcone/stilbene synthase, active site (InterPro:IPR018088), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT4G34850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84600 : 467.0) no description available & (reliability: 1382.0) & (original description: Putative CHSA, Description = Chalcone synthase A, PFAM = PF00195;PF02797)' T '16.8.2.1' 'secondary metabolism.flavonoids.chalcones.naringenin-chalcone synthase' 'niben101scf00536_1517591-1521675' '(p08894|chsa_pethy : 746.0) Chalcone synthase A (EC 2.3.1.74) (Naringenin-chalcone synthase A) - Petunia hybrida (Petunia) & (at5g13930 : 668.0) Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids. Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism.; TRANSPARENT TESTA 4 (TT4); FUNCTIONS IN: naringenin-chalcone synthase activity; INVOLVED IN: in 11 processes; LOCATED IN: plant-type vacuole membrane, endoplasmic reticulum, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Chalcone/stilbene synthase, active site (InterPro:IPR018088), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT4G34850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84600 : 470.0) no description available & (reliability: 1336.0) & (original description: Putative CHSA, Description = Chalcone synthase A, PFAM = PF00195;PF02797)' T '16.8.2.1' 'secondary metabolism.flavonoids.chalcones.naringenin-chalcone synthase' 'niben101scf01146_1303849-1307906' '(q43188|chs2_soltu : 777.0) Chalcone synthase 2 (EC 2.3.1.74) (Naringenin-chalcone synthase 2) - Solanum tuberosum (Potato) & (at5g13930 : 691.0) Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids. Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism.; TRANSPARENT TESTA 4 (TT4); FUNCTIONS IN: naringenin-chalcone synthase activity; INVOLVED IN: in 11 processes; LOCATED IN: plant-type vacuole membrane, endoplasmic reticulum, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Chalcone/stilbene synthase, active site (InterPro:IPR018088), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT4G34850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84600 : 469.0) no description available & (reliability: 1382.0) & (original description: Putative CHSA, Description = Chalcone synthase A, PFAM = PF02797;PF00195)' T '16.8.2.1' 'secondary metabolism.flavonoids.chalcones.naringenin-chalcone synthase' 'niben101scf09590_219517-223866' '(p22927|chsg_pethy : 565.0) Chalcone synthase G (EC 2.3.1.74) (Naringenin-chalcone synthase G) - Petunia hybrida (Petunia) & (at5g13930 : 512.0) Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids. Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism.; TRANSPARENT TESTA 4 (TT4); FUNCTIONS IN: naringenin-chalcone synthase activity; INVOLVED IN: in 11 processes; LOCATED IN: plant-type vacuole membrane, endoplasmic reticulum, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Chalcone/stilbene synthase, active site (InterPro:IPR018088), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT4G34850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84600 : 412.0) no description available & (reliability: 1024.0) & (original description: Putative CHSG, Description = Chalcone synthase G, PFAM = PF00195;PF02797)' T '16.8.2.2' 'secondary metabolism.flavonoids.chalcones.chalcone isomerase' 'niben101scf01916_150514-155689' '(gnl|cdd|66148 : 338.0) no description available & (p11650|cfia_pethy : 331.0) Chalcone--flavonone isomerase A (EC 5.5.1.6) (Chalcone isomerase A) - Petunia hybrida (Petunia) & (at3g55120 : 245.0) Catalyzes the conversion of chalcones into flavanones. Required for the accumulation of purple anthocyanins in leaves and stems.; TRANSPARENT TESTA 5 (TT5); FUNCTIONS IN: chalcone isomerase activity; INVOLVED IN: response to UV, response to UV-B, response to karrikin, response to sucrose stimulus, flavonoid biosynthetic process; LOCATED IN: plant-type vacuole membrane, endoplasmic reticulum, extrinsic to endoplasmic reticulum membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66230.2); Has 391 Blast hits to 390 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 390; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 490.0) & (original description: Putative CHI, Description = Chalcone--flavonone isomerase, PFAM = PF02431)' T '16.8.2.2' 'secondary metabolism.flavonoids.chalcones.chalcone isomerase' 'niben101scf05989_129551-134272' '(gnl|cdd|66148 : 340.0) no description available & (p11650|cfia_pethy : 331.0) Chalcone--flavonone isomerase A (EC 5.5.1.6) (Chalcone isomerase A) - Petunia hybrida (Petunia) & (at3g55120 : 253.0) Catalyzes the conversion of chalcones into flavanones. Required for the accumulation of purple anthocyanins in leaves and stems.; TRANSPARENT TESTA 5 (TT5); FUNCTIONS IN: chalcone isomerase activity; INVOLVED IN: response to UV, response to UV-B, response to karrikin, response to sucrose stimulus, flavonoid biosynthetic process; LOCATED IN: plant-type vacuole membrane, endoplasmic reticulum, extrinsic to endoplasmic reticulum membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66230.2); Has 391 Blast hits to 390 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 390; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative CHI, Description = Chalcone--flavonone isomerase, PFAM = PF02431)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'nbv0.3scaffold6606_39668-46306' '(gnl|cdd|35365 : 241.0) no description available & (at4g10490 : 167.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: secondary metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10500.1); Has 8582 Blast hits to 8537 proteins in 997 species: Archae - 0; Bacteria - 1099; Metazoa - 117; Fungi - 945; Plants - 4980; Viruses - 0; Other Eukaryotes - 1441 (source: NCBI BLink). & (gnl|cdd|33294 : 163.0) no description available & (q05964|fl3h_diaca : 138.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 334.0) & (original description: Putative F3H2, Description = F3H2 protein, PFAM = PF14226;PF03171)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'nbv0.3scaffold11861_40425-45398' '(gnl|cdd|35365 : 244.0) no description available & (at5g24530 : 227.0) Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew.; DOWNY MILDEW RESISTANT 6 (DMR6); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to fungus, response to bacterium, flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q41452|fls_soltu : 186.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Solanum tuberosum (Potato) & (gnl|cdd|33294 : 154.0) no description available & (reliability: 454.0) & (original description: Putative F3H, Description = F3H-like protein, PFAM = PF03171;PF14226)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'nbv0.3scaffold12564_428-3600' '(at4g33360 : 233.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (reliability: 466.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = )' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'nbv0.3scaffold19408_29148-34378' '(gnl|cdd|35365 : 211.0) no description available & (gnl|cdd|33294 : 177.0) no description available & (at3g11180 : 140.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 132.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 264.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'nbv0.3scaffold87126_2420-5796' '(at4g27570 : 441.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: N-terminal protein myristoylation, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G27560.1); Has 4908 Blast hits to 4874 proteins in 244 species: Archae - 0; Bacteria - 41; Metazoa - 215; Fungi - 17; Plants - 4624; Viruses - 3; Other Eukaryotes - 8 (source: NCBI BLink). & (q43716|ufog_pethy : 347.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 151.0) no description available & (reliability: 824.0) & (original description: Putative 3GGT, Description = Anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'nbv0.3scaffold99445_179-3720' '(at3g50740 : 394.0) UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism.; UDP-glucosyl transferase 72E1 (UGT72E1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G66690.1); Has 8063 Blast hits to 8012 proteins in 453 species: Archae - 0; Bacteria - 455; Metazoa - 2482; Fungi - 35; Plants - 4969; Viruses - 57; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 198.0) no description available & (p56725|zox_phavu : 165.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 81.5) no description available & (reliability: 758.0) & (original description: Putative GT5, Description = Anthocyanidin 3-O-glucosyltransferase 5, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'nbv0.5scaffold121_97229-100296' '(p56725|zox_phavu : 218.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at3g46670 : 117.0) UDP-glucosyl transferase 76E11 (UGT76E11); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 76E12 (TAIR:AT3G46660.1); Has 7711 Blast hits to 7649 proteins in 441 species: Archae - 0; Bacteria - 362; Metazoa - 2148; Fungi - 33; Plants - 5036; Viruses - 65; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36406 : 84.2) no description available & (reliability: 228.0) & (original description: Putative ZOG2, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'nbv0.5scaffold273_549474-552378' '(p56725|zox_phavu : 120.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g36770 : 87.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, sepal, flower, pedicel, synergid; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72E1 (TAIR:AT3G50740.1); Has 8229 Blast hits to 8179 proteins in 484 species: Archae - 0; Bacteria - 520; Metazoa - 2565; Fungi - 32; Plants - 4963; Viruses - 88; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 84.6) no description available & (reliability: 168.6) & (original description: Putative GT2, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'nbv0.5scaffold1760_72749-78530' '(at4g33360 : 466.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (gnl|cdd|36715 : 216.0) no description available & (gnl|cdd|30800 : 137.0) no description available & (reliability: 932.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = PF01370)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'nbv0.5scaffold2034_18323-21310' '(q43716|ufog_pethy : 452.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (at5g54060 : 154.0) UDP-glucose:flavonoid 3-o-glucosyltransferase (UF3GT); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: N-terminal protein myristoylation, response to sucrose stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G54010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative GTR1, Description = Glucosyl-transferase, PFAM = )' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'nbv0.5scaffold2129_320350-326010' '(at2g18570 : 157.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G18560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 156.0) no description available & (q43716|ufog_pethy : 145.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (reliability: 314.0) & (original description: Putative NSGT1, Description = Truncated non-smoky glycosyltransferase 1, PFAM = PF08268;PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'nbv0.5scaffold5797_96612-108152' '(at4g16330 : 412.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: flavonoid biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G38240.1). & (gnl|cdd|35365 : 308.0) no description available & (q07512|fls_pethy : 204.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Petunia hybrida (Petunia) & (gnl|cdd|33294 : 170.0) no description available & (reliability: 824.0) & (original description: Putative F3H, Description = Flavanone-3-hydroxylase, PFAM = PF14226;PF03171)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben044scf00003526ctg006_158-2283' '(at4g16330 : 141.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: flavonoid biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G38240.1). & (gnl|cdd|35365 : 123.0) no description available & (q05964|fl3h_diaca : 90.1) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|33294 : 86.1) no description available & (reliability: 282.0) & (original description: Putative F3H, Description = Flavanone 3-hydroxylase, PFAM = PF03171)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben044scf00010150ctg016_8418-14556' '(gnl|cdd|35365 : 275.0) no description available & (at2g36690 : 209.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G60290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33294 : 180.0) no description available & (p51091|ldox_maldo : 154.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 404.0) & (original description: Putative DLO2, Description = Protein DMR6-LIKE OXYGENASE 2, PFAM = PF03171;PF14226)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben044scf00017324ctg011_1129-3995' '(at5g65550 : 187.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 179.0) no description available & (q43716|ufog_pethy : 171.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|79510 : 90.8) no description available & (reliability: 356.0) & (original description: Putative UGT94E2, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben044scf00021540ctg000_49997-55189' '(at4g33360 : 389.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (gnl|cdd|36715 : 205.0) no description available & (gnl|cdd|30800 : 128.0) no description available & (reliability: 778.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = PF01370)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben044scf00022926ctg008_12198-17190' '(at4g01070 : 401.0) the glycosyltransferase (UGT72B1) is involved in metabolizing xenobiotica (chloroaniline and chlorophenole). Comparison between wild type and knock-out mutant demonstrates the central role of this gene for metabolizing chloroaniline but significantly less for chlorophenole. The glucosyltransferase preferred UDP-xylose over UDP-glucose indicating its (additional) functioning as a xylosyltransferase in planta; GT72B1; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1). & (gnl|cdd|36406 : 171.0) no description available & (q8rxa5|czog2_maize : 168.0) Cis-zeatin O-glucosyltransferase 2 (EC 2.4.1.215) (cisZOG2) - Zea mays (Maize) & (gnl|cdd|79510 : 80.8) no description available & (reliability: 802.0) & (original description: Putative AS, Description = Hydroquinone glucosyltransferase, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben044scf00024329ctg002_10796-15193' '(at4g33360 : 240.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (gnl|cdd|36715 : 155.0) no description available & (gnl|cdd|30800 : 102.0) no description available & (reliability: 480.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = PF01073)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben044scf00033957ctg002_12343-17131' '(at4g25300 : 298.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G25310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 225.0) no description available & (gnl|cdd|33294 : 132.0) no description available & (o04705|gao1d_wheat : 122.0) Gibberellin 20 oxidase 1-D (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-D) (GA 20-oxidase 1-D) (Ta20ox1D) (TaGA20ox1-D) (Protein Wga20) - Triticum aestivum (Wheat) & (reliability: 574.0) & (original description: Putative CODM, Description = Protein SRG1, PFAM = PF03171;PF14226)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf00113_700552-703958' '(q43716|ufog_pethy : 854.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (at5g54010 : 342.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G53990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 170.0) no description available & (reliability: 684.0) & (original description: Putative RT, Description = Anthocyanidin 3-O-glucosyltransferase, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf00175_202952-206397' '(at4g15280 : 352.0) UDP-glucosyl transferase 71B5 (UGT71B5); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G15260.1); Has 7674 Blast hits to 7626 proteins in 477 species: Archae - 0; Bacteria - 573; Metazoa - 2069; Fungi - 31; Plants - 4920; Viruses - 24; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|36406 : 191.0) no description available & (p56725|zox_phavu : 152.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 84.6) no description available & (reliability: 650.0) & (original description: Putative GT6, Description = UDP-glucose flavonoid 3-O-glucosyltransferase 6, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf00219_103101-108882' '(at4g33360 : 454.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (gnl|cdd|36715 : 209.0) no description available & (gnl|cdd|30800 : 130.0) no description available & (reliability: 908.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = PF01370)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf00225_15112-32735' '(at5g24530 : 490.0) Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew.; DOWNY MILDEW RESISTANT 6 (DMR6); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to fungus, response to bacterium, flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35365 : 330.0) no description available & (q06942|fl3h_maldo : 227.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 163.0) no description available & (reliability: 980.0) & (original description: Putative DMR6, Description = Protein DOWNY MILDEW RESISTANCE 6, PFAM = PF03171;PF14226)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf00238_1134877-1142518' '(gnl|cdd|35365 : 305.0) no description available & (at3g60290 : 238.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to karrikin, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G44800.1); Has 8462 Blast hits to 8411 proteins in 989 species: Archae - 0; Bacteria - 1081; Metazoa - 111; Fungi - 1027; Plants - 4887; Viruses - 0; Other Eukaryotes - 1356 (source: NCBI BLink). & (q06942|fl3h_maldo : 195.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 162.0) no description available & (reliability: 454.0) & (original description: Putative DMR6, Description = Protein DOWNY MILDEW RESISTANCE 6, PFAM = PF03171;PF14226)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf00560_516677-523047' '(p56725|zox_phavu : 398.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36780 : 160.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 157.0) no description available & (gnl|cdd|79510 : 81.9) no description available & (reliability: 294.0) & (original description: Putative PGSC0003DMG400032511, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf00700_634277-646819' '(at4g16330 : 258.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: flavonoid biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G38240.1). & (gnl|cdd|35365 : 197.0) no description available & (q00985|acco1_maldo : 124.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (Protein AP4) (PAE12) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 115.0) no description available & (reliability: 516.0) & (original description: Putative F3H, Description = Flavanone 3-hydroxylase, PFAM = PF03171)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf00748_37207-40715' '(gnl|cdd|35365 : 270.0) no description available & (at5g24530 : 236.0) Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew.; DOWNY MILDEW RESISTANT 6 (DMR6); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to fungus, response to bacterium, flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q05964|fl3h_diaca : 172.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|33294 : 149.0) no description available & (reliability: 472.0) & (original description: Putative H6H, Description = Hyoscyamine 6-dioxygenase, PFAM = PF03171;PF14226)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf00817_587509-592982' '(at4g01070 : 523.0) the glycosyltransferase (UGT72B1) is involved in metabolizing xenobiotica (chloroaniline and chlorophenole). Comparison between wild type and knock-out mutant demonstrates the central role of this gene for metabolizing chloroaniline but significantly less for chlorophenole. The glucosyltransferase preferred UDP-xylose over UDP-glucose indicating its (additional) functioning as a xylosyltransferase in planta; GT72B1; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1). & (gnl|cdd|36406 : 200.0) no description available & (p56725|zox_phavu : 164.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 80.8) no description available & (reliability: 1046.0) & (original description: Putative ugt1, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf00817_587801-590444' '(at4g01070 : 200.0) the glycosyltransferase (UGT72B1) is involved in metabolizing xenobiotica (chloroaniline and chlorophenole). Comparison between wild type and knock-out mutant demonstrates the central role of this gene for metabolizing chloroaniline but significantly less for chlorophenole. The glucosyltransferase preferred UDP-xylose over UDP-glucose indicating its (additional) functioning as a xylosyltransferase in planta; GT72B1; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1). & (reliability: 400.0) & (original description: Putative ugt1, Description = Glycosyltransferase, PFAM = )' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf01005_217574-221498' '(gnl|cdd|35365 : 282.0) no description available & (at2g36690 : 235.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G60290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33294 : 177.0) no description available & (p51091|ldox_maldo : 173.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 462.0) & (original description: Putative F3H2, Description = F3H2 protein, PFAM = PF03171;PF14226)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf01076_248890-253656' '(at4g01070 : 582.0) the glycosyltransferase (UGT72B1) is involved in metabolizing xenobiotica (chloroaniline and chlorophenole). Comparison between wild type and knock-out mutant demonstrates the central role of this gene for metabolizing chloroaniline but significantly less for chlorophenole. The glucosyltransferase preferred UDP-xylose over UDP-glucose indicating its (additional) functioning as a xylosyltransferase in planta; GT72B1; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1). & (gnl|cdd|36406 : 207.0) no description available & (p56725|zox_phavu : 184.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 91.9) no description available & (reliability: 1164.0) & (original description: Putative AS, Description = Hydroquinone glucosyltransferase, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf01141_772760-777717' '(gnl|cdd|35365 : 244.0) no description available & (at5g24530 : 240.0) Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew.; DOWNY MILDEW RESISTANT 6 (DMR6); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to fungus, response to bacterium, flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p41090|fl3h_vitvi : 167.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Vitis vinifera (Grape) & (gnl|cdd|33294 : 135.0) no description available & (reliability: 480.0) & (original description: Putative Co31, Description = Downy Mildew Resistant 6-like protein, PFAM = PF03171;PF14226)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf01239_173564-182758' '(at5g24530 : 506.0) Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew.; DOWNY MILDEW RESISTANT 6 (DMR6); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to fungus, response to bacterium, flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35365 : 325.0) no description available & (q06942|fl3h_maldo : 227.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 166.0) no description available & (reliability: 1012.0) & (original description: Putative DMR6, Description = Protein DOWNY MILDEW RESISTANCE 6, PFAM = PF03171;PF14226)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf01386_22394-25809' '(p56725|zox_phavu : 434.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36780 : 186.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 155.0) no description available & (gnl|cdd|79510 : 88.5) no description available & (reliability: 342.0) & (original description: Putative CISZOG1, Description = Cis-zeatin O-glucosyltransferase 1, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf01559_94486-97253' '(at1g07250 : 402.0) UDP-glucosyl transferase 71C4 (UGT71C4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71C3 (TAIR:AT1G07260.1); Has 7587 Blast hits to 7548 proteins in 444 species: Archae - 0; Bacteria - 410; Metazoa - 2119; Fungi - 25; Plants - 4933; Viruses - 39; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 198.0) no description available & (p56725|zox_phavu : 155.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 85.8) no description available & (reliability: 780.0) & (original description: Putative GT3, Description = Putative UDP-glucose flavonoid 3-O-glucosyltransferase 3, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf01773_370984-374699' '(at1g68540 : 442.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, oxidoreductase activity, binding, catalytic activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G25460.1). & (gnl|cdd|36715 : 367.0) no description available & (p51110|dfra_vitvi : 198.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (gnl|cdd|30800 : 130.0) no description available & (reliability: 806.0) & (original description: Putative TKPR2, Description = Tetraketide alpha-pyrone reductase 2, PFAM = PF01370)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf01777_334394-337809' '(p56725|zox_phavu : 421.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36770 : 188.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7907 Blast hits to 7812 proteins in 435 species: Archae - 0; Bacteria - 273; Metazoa - 2293; Fungi - 33; Plants - 5130; Viruses - 108; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 158.0) no description available & (reliability: 352.0) & (original description: Putative ZOG9, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf01998_372277-375671' '(p56725|zox_phavu : 469.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g29730 : 192.0) UDP-glucosyl transferase 71D1 (UGT71D1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G29710.1); Has 7713 Blast hits to 7666 proteins in 413 species: Archae - 0; Bacteria - 339; Metazoa - 2353; Fungi - 25; Plants - 4863; Viruses - 68; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 153.0) no description available & (gnl|cdd|79510 : 98.5) no description available & (reliability: 384.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf02107_721920-728118' '(at1g17020 : 331.0) Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene.; senescence-related gene 1 (SRG1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G17010.1); Has 8560 Blast hits to 8517 proteins in 996 species: Archae - 0; Bacteria - 1133; Metazoa - 115; Fungi - 988; Plants - 4970; Viruses - 0; Other Eukaryotes - 1354 (source: NCBI BLink). & (gnl|cdd|35365 : 285.0) no description available & (q41452|fls_soltu : 182.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Solanum tuberosum (Potato) & (gnl|cdd|33294 : 159.0) no description available & (reliability: 618.0) & (original description: Putative SRG1, Description = Protein SRG1, PFAM = PF14226;PF03171)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf02173_27164-30032' '(q43716|ufog_pethy : 854.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (at5g54010 : 342.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G53990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 163.0) no description available & (reliability: 684.0) & (original description: Putative rt, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf02271_286487-290986' '(gnl|cdd|35365 : 303.0) no description available & (at5g24530 : 249.0) Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew.; DOWNY MILDEW RESISTANT 6 (DMR6); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to fungus, response to bacterium, flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q06942|fl3h_maldo : 210.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 162.0) no description available & (reliability: 498.0) & (original description: Putative DMR6, Description = Protein DOWNY MILDEW RESISTANCE 6, PFAM = PF14226;PF03171)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf02337_127789-132207' '(gnl|cdd|35365 : 210.0) no description available & (gnl|cdd|33294 : 178.0) no description available & (at3g11180 : 138.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 136.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 274.0) & (original description: Putative GA7ox1, Description = Flavonol synthase/flavanone 3-hydroxylase, PFAM = PF14226;PF03171)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf02367_16129-20520' '(at4g33360 : 289.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (gnl|cdd|36715 : 90.7) no description available & (reliability: 578.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = PF01370)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf02565_331187-336246' '(at4g01070 : 597.0) the glycosyltransferase (UGT72B1) is involved in metabolizing xenobiotica (chloroaniline and chlorophenole). Comparison between wild type and knock-out mutant demonstrates the central role of this gene for metabolizing chloroaniline but significantly less for chlorophenole. The glucosyltransferase preferred UDP-xylose over UDP-glucose indicating its (additional) functioning as a xylosyltransferase in planta; GT72B1; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1). & (gnl|cdd|36406 : 215.0) no description available & (p56725|zox_phavu : 184.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 93.5) no description available & (reliability: 1194.0) & (original description: Putative AS, Description = Hydroquinone glucosyltransferase, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf02807_185533-188951' '(at1g07250 : 395.0) UDP-glucosyl transferase 71C4 (UGT71C4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71C3 (TAIR:AT1G07260.1); Has 7587 Blast hits to 7548 proteins in 444 species: Archae - 0; Bacteria - 410; Metazoa - 2119; Fungi - 25; Plants - 4933; Viruses - 39; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 183.0) no description available & (q6jah0|czog_sorbi : 154.0) Putative cis-zeatin O-glucosyltransferase (EC 2.4.1.215) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (gnl|cdd|79510 : 84.2) no description available & (reliability: 744.0) & (original description: Putative UGT71K1, Description = UDP-glycosyltransferase 71K1, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf03304_119733-137384' '(at4g16330 : 402.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: flavonoid biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G38240.1). & (gnl|cdd|35365 : 301.0) no description available & (p51092|ldox_pethy : 199.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) - Petunia hybrida (Petunia) & (gnl|cdd|33294 : 168.0) no description available & (reliability: 804.0) & (original description: Putative F3H, Description = Flavanone-3-hydroxylase, PFAM = PF14226;PF03171)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf03427_1143726-1147102' '(at4g27570 : 440.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: N-terminal protein myristoylation, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G27560.1); Has 4908 Blast hits to 4874 proteins in 244 species: Archae - 0; Bacteria - 41; Metazoa - 215; Fungi - 17; Plants - 4624; Viruses - 3; Other Eukaryotes - 8 (source: NCBI BLink). & (q43716|ufog_pethy : 351.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 150.0) no description available & (reliability: 828.0) & (original description: Putative 3GGT, Description = Anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf03590_104512-107677' '(gnl|cdd|35365 : 194.0) no description available & (gnl|cdd|33294 : 136.0) no description available & (at5g08640 : 129.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o04847|dv4h_catro : 121.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 238.0) & (original description: Putative GA7ox1, Description = Flavonol synthase/flavanone 3-hydroxylase, PFAM = PF03171;PF14226)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf03590_173893-177150' '(gnl|cdd|35365 : 207.0) no description available & (gnl|cdd|33294 : 177.0) no description available & (at5g08640 : 138.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o48882|acco2_maldo : 128.0) 1-aminocyclopropane-1-carboxylate oxidase 2 (EC 1.14.17.4) (ACC oxidase 2) (Ethylene-forming enzyme) (EFE) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 260.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf03709_478859-482389' '(p56725|zox_phavu : 342.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g15480 : 157.0) UDP-glucosyl transferase 73B5 (UGT73B5); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 73B4 (TAIR:AT2G15490.3). & (gnl|cdd|36406 : 143.0) no description available & (gnl|cdd|79510 : 86.5) no description available & (reliability: 306.0) & (original description: Putative GT2, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf04290_222702-226624' '(gnl|cdd|35365 : 213.0) no description available & (gnl|cdd|33294 : 174.0) no description available & (at2g30830 : 134.0) encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G30840.1); Has 8436 Blast hits to 8403 proteins in 1008 species: Archae - 0; Bacteria - 1171; Metazoa - 115; Fungi - 900; Plants - 4884; Viruses - 0; Other Eukaryotes - 1366 (source: NCBI BLink). & (q08506|acco1_pethy : 119.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 242.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf04404_335285-339125' '(p56725|zox_phavu : 445.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g15490 : 180.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 136.0) no description available & (gnl|cdd|79510 : 85.0) no description available & (reliability: 332.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf04932_124212-145824' '(gnl|cdd|35365 : 246.0) no description available & (at5g24530 : 225.0) Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew.; DOWNY MILDEW RESISTANT 6 (DMR6); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to fungus, response to bacterium, flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q41452|fls_soltu : 183.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Solanum tuberosum (Potato) & (gnl|cdd|33294 : 154.0) no description available & (reliability: 450.0) & (original description: Putative Co31, Description = Hyoscyamine 6-dioxygenase, PFAM = PF14226;PF03171)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf04940_123504-126946' '(at3g21800 : 332.0) UDP-glucosyl transferase 71B8 (UGT71B8); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, quercetin 4'-O-glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G21790.1); Has 7042 Blast hits to 6994 proteins in 367 species: Archae - 0; Bacteria - 212; Metazoa - 1805; Fungi - 25; Plants - 4944; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|36406 : 195.0) no description available & (p56725|zox_phavu : 148.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 85.4) no description available & (reliability: 646.0) & (original description: Putative UGT71A15, Description = UDP-glycosyltransferase 71A15, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf06611_70908-86459' '(at4g33360 : 378.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (gnl|cdd|36715 : 126.0) no description available & (gnl|cdd|30800 : 93.1) no description available & (reliability: 756.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = PF01073)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf07089_244139-247527' '(p56725|zox_phavu : 429.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g15490 : 188.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 152.0) no description available & (gnl|cdd|79510 : 81.1) no description available & (reliability: 348.0) & (original description: Putative ZOG1, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf07089_278058-281237' '(p56725|zox_phavu : 426.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g15490 : 196.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 156.0) no description available & (gnl|cdd|79510 : 82.7) no description available & (reliability: 368.0) & (original description: Putative CISZOG1, Description = Cis-zeatin O-glucosyltransferase 1, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf07105_411901-415751' '(gnl|cdd|35365 : 248.0) no description available & (at4g10490 : 205.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: secondary metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10500.1); Has 8582 Blast hits to 8537 proteins in 997 species: Archae - 0; Bacteria - 1099; Metazoa - 117; Fungi - 945; Plants - 4980; Viruses - 0; Other Eukaryotes - 1441 (source: NCBI BLink). & (q41452|fls_soltu : 158.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Solanum tuberosum (Potato) & (gnl|cdd|33294 : 142.0) no description available & (reliability: 410.0) & (original description: Putative H6H, Description = Hyoscyamine 6-dioxygenase, PFAM = PF03171;PF14226)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf07115_34791-39547' '(gnl|cdd|35365 : 208.0) no description available & (gnl|cdd|33294 : 176.0) no description available & (at3g11180 : 139.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 130.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 268.0) & (original description: Putative glysoja_034856, Description = Gibberellin 2-beta-dioxygenase 8, PFAM = PF03171;PF14226)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf08195_348435-352938' '(at1g17020 : 380.0) Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene.; senescence-related gene 1 (SRG1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G17010.1); Has 8560 Blast hits to 8517 proteins in 996 species: Archae - 0; Bacteria - 1133; Metazoa - 115; Fungi - 988; Plants - 4970; Viruses - 0; Other Eukaryotes - 1354 (source: NCBI BLink). & (gnl|cdd|35365 : 301.0) no description available & (o04706|gao1b_wheat : 176.0) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (gnl|cdd|33294 : 163.0) no description available & (reliability: 726.0) & (original description: Putative SRG1, Description = Protein SRG1, PFAM = PF03171;PF14226)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf08724_497483-501995' '(gnl|cdd|35365 : 209.0) no description available & (gnl|cdd|33294 : 168.0) no description available & (at3g11180 : 139.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (o04847|dv4h_catro : 122.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 260.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf08887_72629-76533' '(gnl|cdd|35365 : 264.0) no description available & (at5g24530 : 194.0) Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew.; DOWNY MILDEW RESISTANT 6 (DMR6); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to fungus, response to bacterium, flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p41090|fl3h_vitvi : 145.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Vitis vinifera (Grape) & (gnl|cdd|33294 : 145.0) no description available & (reliability: 388.0) & (original description: Putative H6H, Description = Hyoscyamine 6-dioxygenase, PFAM = PF14226;PF03171)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf09184_306997-312657' '(gnl|cdd|36406 : 158.0) no description available & (at2g18570 : 157.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G18560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q43716|ufog_pethy : 145.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (reliability: 314.0) & (original description: Putative bfgt1, Description = Glycosyltransferase, PFAM = PF08268;PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf11008_99362-102786' '(p56725|zox_phavu : 459.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34138 : 191.0) UDP-glucosyl transferase 73B1 (UGT73B1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B3 (TAIR:AT4G34131.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 151.0) no description available & (gnl|cdd|79510 : 98.9) no description available & (reliability: 346.0) & (original description: Putative ZOG7, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf11008_286968-290814' '(p56725|zox_phavu : 483.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34131 : 177.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 137.0) no description available & (gnl|cdd|79510 : 89.6) no description available & (reliability: 332.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf12205_494417-499205' '(at1g17020 : 359.0) Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene.; senescence-related gene 1 (SRG1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G17010.1); Has 8560 Blast hits to 8517 proteins in 996 species: Archae - 0; Bacteria - 1133; Metazoa - 115; Fungi - 988; Plants - 4970; Viruses - 0; Other Eukaryotes - 1354 (source: NCBI BLink). & (gnl|cdd|35365 : 286.0) no description available & (o04706|gao1b_wheat : 165.0) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (gnl|cdd|33294 : 160.0) no description available & (reliability: 698.0) & (original description: Putative CODM, Description = Protein SRG1, PFAM = PF03171;PF14226)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf12290_140493-145341' '(p56725|zox_phavu : 360.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34138 : 181.0) UDP-glucosyl transferase 73B1 (UGT73B1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B3 (TAIR:AT4G34131.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 133.0) no description available & (reliability: 334.0) & (original description: Putative PGSC0003DMG400016773, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf12290_157761-160507' '(p56725|zox_phavu : 270.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34138 : 164.0) UDP-glucosyl transferase 73B1 (UGT73B1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B3 (TAIR:AT4G34131.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 110.0) no description available & (gnl|cdd|79510 : 81.1) no description available & (reliability: 322.0) & (original description: Putative GT2, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf13710_282548-286011' '(at3g50740 : 437.0) UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism.; UDP-glucosyl transferase 72E1 (UGT72E1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G66690.1); Has 8063 Blast hits to 8012 proteins in 453 species: Archae - 0; Bacteria - 455; Metazoa - 2482; Fungi - 35; Plants - 4969; Viruses - 57; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 185.0) no description available & (p56725|zox_phavu : 173.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 84.2) no description available & (reliability: 854.0) & (original description: Putative GT5, Description = Anthocyanidin 3-O-glucosyltransferase 5, PFAM = PF00201)' T '16.8.3' 'secondary metabolism.flavonoids.dihydroflavonols' 'niben101scf17597_151847-155154' '(gnl|cdd|36406 : 170.0) no description available & (at4g34131 : 162.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43716|ufog_pethy : 142.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|32004 : 83.2) no description available & (reliability: 300.0) & (original description: Putative NSGT1, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.3.1' 'secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase' 'nbv0.3scaffold14384_32574-38965' '(gnl|cdd|36715 : 224.0) no description available & (p14720|dfra_pethy : 178.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Petunia hybrida (Petunia) & (at4g27250 : 164.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: cinnamyl-alcohol dehydrogenase activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: dihydroflavonol 4-reductase (TAIR:AT5G42800.1). & (gnl|cdd|30800 : 85.4) no description available & (reliability: 328.0) & (original description: Putative hm2, Description = NADPH HC toxin reductase, PFAM = PF01370)' T '16.8.3.1' 'secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase' 'niben101scf00305_617826-621503' '(p14720|dfra_pethy : 706.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Petunia hybrida (Petunia) & (at5g42800 : 486.0) dihydroflavonol reductase. Catalyzes the conversion of dihydroquercetin to leucocyanidin in the biosynthesis of anthocyanins.; dihydroflavonol 4-reductase (DFR); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G45400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36715 : 360.0) no description available & (gnl|cdd|30800 : 137.0) no description available & (reliability: 972.0) & (original description: Putative ban, Description = Dihydroflavonol 4-reductase, PFAM = PF01370)' T '16.8.3.1' 'secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase' 'niben101scf00603_820759-824896' '(gnl|cdd|36715 : 277.0) no description available & (at2g45400 : 241.0) involved in the regulation of brassinosteroid metabolic pathway; BEN1; FUNCTIONS IN: coenzyme binding, oxidoreductase activity, acting on CH-OH group of donors, binding, catalytic activity; INVOLVED IN: regulation of brassinosteroid biosynthetic process, brassinosteroid metabolic process, response to light intensity, flavonoid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: dihydroflavonol 4-reductase (TAIR:AT5G42800.1); Has 8852 Blast hits to 8839 proteins in 1531 species: Archae - 135; Bacteria - 3285; Metazoa - 357; Fungi - 858; Plants - 2633; Viruses - 7; Other Eukaryotes - 1577 (source: NCBI BLink). & (p51106|dfra_horvu : 207.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Hordeum vulgare (Barley) & (gnl|cdd|30800 : 110.0) no description available & (reliability: 482.0) & (original description: Putative dfr, Description = Dihydroflavonol 4-reductase, PFAM = PF01370)' T '16.8.3.1' 'secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase' 'niben101scf00817_385825-398191' '(gnl|cdd|36715 : 227.0) no description available & (at4g27250 : 176.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: cinnamyl-alcohol dehydrogenase activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: dihydroflavonol 4-reductase (TAIR:AT5G42800.1). & (p14720|dfra_pethy : 163.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Petunia hybrida (Petunia) & (gnl|cdd|30800 : 89.3) no description available & (reliability: 352.0) & (original description: Putative hm2, Description = NADPH HC toxin reductase, PFAM = PF01370)' T '16.8.3.1' 'secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase' 'niben101scf06332_72797-83476' '(at4g27250 : 377.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: cinnamyl-alcohol dehydrogenase activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: dihydroflavonol 4-reductase (TAIR:AT5G42800.1). & (gnl|cdd|36715 : 310.0) no description available & (p51104|dfra_diaca : 260.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|30800 : 129.0) no description available & (reliability: 754.0) & (original description: Putative dfr, Description = Dihydroflavonol 4-reductase, PFAM = PF01370)' T '16.8.3.1' 'secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase' 'niben101scf08321_217955-237076' '(gnl|cdd|36715 : 219.0) no description available & (at1g61720 : 157.0) Negative regulator of flavonoid biosynthesis, mutants accumulate flavonoid pigments in their seed coat, putative oxidoreductase. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium.; BANYULS (BAN); FUNCTIONS IN: oxidoreductase activity, anthocyanidin reductase activity; INVOLVED IN: negative regulation of flavonoid biosynthetic process; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: C globular stage, seed development stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: dihydroflavonol 4-reductase (TAIR:AT5G42800.1); Has 9654 Blast hits to 9641 proteins in 1549 species: Archae - 92; Bacteria - 3374; Metazoa - 271; Fungi - 951; Plants - 2463; Viruses - 15; Other Eukaryotes - 2488 (source: NCBI BLink). & (p14720|dfra_pethy : 153.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Petunia hybrida (Petunia) & (gnl|cdd|30800 : 91.2) no description available & (reliability: 312.0) & (original description: Putative hm2, Description = NADPH HC toxin reductase, PFAM = PF01370)' T '16.8.3.1' 'secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase' 'niben101scf08508_42594-47161' '(gnl|cdd|36715 : 310.0) no description available & (at2g45400 : 301.0) involved in the regulation of brassinosteroid metabolic pathway; BEN1; FUNCTIONS IN: coenzyme binding, oxidoreductase activity, acting on CH-OH group of donors, binding, catalytic activity; INVOLVED IN: regulation of brassinosteroid biosynthetic process, brassinosteroid metabolic process, response to light intensity, flavonoid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: dihydroflavonol 4-reductase (TAIR:AT5G42800.1); Has 8852 Blast hits to 8839 proteins in 1531 species: Archae - 135; Bacteria - 3285; Metazoa - 357; Fungi - 858; Plants - 2633; Viruses - 7; Other Eukaryotes - 1577 (source: NCBI BLink). & (p51110|dfra_vitvi : 265.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (gnl|cdd|30800 : 131.0) no description available & (reliability: 602.0) & (original description: Putative dfr, Description = Dihydroflavonol 4-reductase, PFAM = PF01370)' T '16.8.3.1' 'secondary metabolism.flavonoids.dihydroflavonols.dihydroflavonol 4-reductase' 'niben101scf12011_8924-13302' '(at4g35420 : 508.0) Encodes DRL1 (Dihydroflavonol 4-reductase-like1), a closely related homolog of the rice anther-specific gene OsDFR2. DRL1 may be involved in a metabolic pathway essential for pollen wall development and male fertility. Mutant plants have impaired pollen formation and seed production.; dihydroflavonol 4-reductase-like1 (DRL1); FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: seed development, pollen development; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, hypocotyl, sepal, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G68540.1); Has 11019 Blast hits to 11006 proteins in 1795 species: Archae - 197; Bacteria - 4697; Metazoa - 293; Fungi - 927; Plants - 2536; Viruses - 49; Other Eukaryotes - 2320 (source: NCBI BLink). & (gnl|cdd|36715 : 361.0) no description available & (p51110|dfra_vitvi : 244.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (gnl|cdd|30800 : 123.0) no description available & (reliability: 1016.0) & (original description: Putative TKPR1, Description = Tetraketide alpha-pyrone reductase 1, PFAM = PF01370)' T '16.8.3.2' 'secondary metabolism.flavonoids.dihydroflavonols.flavanone 3-hydroxylase' 'niben044scf00014869ctg001_21343-24834' '(gnl|cdd|35365 : 171.0) no description available & (gnl|cdd|33294 : 134.0) no description available & (at4g25420 : 132.0) Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light.; GA20OX1; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 20 oxidase 2 (TAIR:AT5G51810.1); Has 8544 Blast hits to 8501 proteins in 990 species: Archae - 0; Bacteria - 1084; Metazoa - 124; Fungi - 981; Plants - 4942; Viruses - 0; Other Eukaryotes - 1413 (source: NCBI BLink). & (q06942|fl3h_maldo : 129.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 248.0) & (original description: Putative PGSC0003DMG400039990, Description = Gibberellin 20 oxidase, putative, PFAM = PF03171;PF14226)' T '16.8.3.2' 'secondary metabolism.flavonoids.dihydroflavonols.flavanone 3-hydroxylase' 'niben101scf09345_116049-119649' '(q07353|fl3h_pethy : 662.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) (Fragment) - Petunia hybrida (Petunia) & (at3g51240 : 607.0) Encodes flavanone 3-hydroxylase that is coordinately expressed with chalcone synthase and chalcone isomerases. Regulates flavonoid biosynthesis.; flavanone 3-hydroxylase (F3H); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1). & (gnl|cdd|35365 : 293.0) no description available & (gnl|cdd|33294 : 170.0) no description available & (reliability: 1214.0) & (original description: Putative AN3, Description = Naringenin,2-oxoglutarate 3-dioxygenase, PFAM = PF14226;PF03171)' T '16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'nbv0.3scaffold3920_36775-40994' '(gnl|cdd|35378 : 467.0) no description available & (q9sbq9|f3ph_pethy : 333.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (at3g48310 : 325.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily A, polypeptide 22" (CYP71A22); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 21 (TAIR:AT3G48320.1); Has 32713 Blast hits to 32486 proteins in 1636 species: Archae - 45; Bacteria - 3163; Metazoa - 11763; Fungi - 7101; Plants - 9557; Viruses - 3; Other Eukaryotes - 1081 (source: NCBI BLink). & (gnl|cdd|84486 : 312.0) no description available & (reliability: 642.0) & (original description: Putative cytochrome P450 CYP736C4, Description = Cytochrome P450 CYP736C4, PFAM = PF00067)' T '16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'nbv0.3scaffold12223_40338-44522' '(gnl|cdd|35378 : 477.0) no description available & (at5g07990 : 371.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (o81973|c93a3_soybn : 359.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 322.0) no description available & (reliability: 742.0) & (original description: Putative f3'h, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'nbv0.3scaffold25444_6213-23845' '(q9sbq9|f3ph_pethy : 202.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (at5g07990 : 170.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (gnl|cdd|35378 : 155.0) no description available & (reliability: 340.0) & (original description: Putative F3'H, Description = Flavonoid 3'-hydroxylase, PFAM = PF00067)' T '16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'nbv0.3scaffold29896_16689-21532' '(gnl|cdd|35378 : 474.0) no description available & (at5g07990 : 403.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (p37120|c75a2_solme : 379.0) Flavonoid 3',5'-hydroxylase (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A2) (CYPLXXVA2) (P-450EG1) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 302.0) no description available & (reliability: 806.0) & (original description: Putative cyp07, Description = Cytochrome P450 mono-oxygenase, PFAM = PF00067)' T '16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'nbv0.3scaffold50287_1-2247' '(gnl|cdd|35378 : 192.0) no description available & (at3g52970 : 152.0) member of CYP76G; "cytochrome P450, family 76, subfamily G, polypeptide 1" (CYP76G1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1). & (p37122|c76a2_solme : 137.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 116.0) no description available & (reliability: 274.0) & (original description: Putative cpr, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T '16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'nbv0.3scaffold53101_9441-14078' '(p48418|c75a1_pethy : 913.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (at5g07990 : 500.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (gnl|cdd|35378 : 473.0) no description available & (gnl|cdd|84486 : 363.0) no description available & (reliability: 1000.0) & (original description: Putative f3', Description = Flavonoid 3'-hydroxylase, PFAM = PF00067)' T '16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'nbv0.3scaffold87104_2163-5760' '(gnl|cdd|35378 : 448.0) no description available & (at5g07990 : 390.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (q9sbq9|f3ph_pethy : 367.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 286.0) no description available & (reliability: 780.0) & (original description: Putative f3h, Description = Flavonoid 3'-hydroxylase, PFAM = PF00067)' T '16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'nbv0.5scaffold5669_589-3581' '(gnl|cdd|35378 : 139.0) no description available & (at1g01280 : 129.0) member of CYP703A CYP703A2 is expressed specifically in anthers of land plants, catalyzing the in-chain hydroxylation at the C-7 position of medium-chain saturated fatty acids (lauric acid in-chain hydroxylase) which is involved in pollen development (sporopollenin synthesis).; "cytochrome P450, family 703, subfamily A, polypeptide 2" (CYP703A2); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, oxygen binding; INVOLVED IN: medium-chain fatty acid metabolic process, pollen wall assembly, medium-chain fatty acid biosynthetic process, sporopollenin biosynthetic process, pollen exine formation; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G07990.1); Has 29652 Blast hits to 29399 proteins in 1569 species: Archae - 44; Bacteria - 2451; Metazoa - 11172; Fungi - 6019; Plants - 9091; Viruses - 3; Other Eukaryotes - 872 (source: NCBI BLink). & (q42798|c93a1_soybn : 123.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|84486 : 81.9) no description available & (reliability: 234.0) & (original description: Putative cyp07, Description = Flavonoid 3'-monooxygenase, PFAM = PF00067)' T '16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben044scf00001206ctg001_1-2494' '(p48418|c75a1_pethy : 889.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (at5g07990 : 465.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (gnl|cdd|35378 : 448.0) no description available & (gnl|cdd|84486 : 341.0) no description available & (reliability: 930.0) & (original description: Putative f3', Description = Flavonoid 3'-hydroxylase, PFAM = PF00067)' T '16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben044scf00002011ctg016_61-2988' '(gnl|cdd|35378 : 229.0) no description available & (at5g07990 : 179.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (p48418|c75a1_pethy : 172.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 114.0) no description available & (reliability: 358.0) & (original description: Putative cyp07, Description = Flavonoid 3'-monooxygenase, PFAM = PF00067)' T '16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben044scf00018310ctg006_2187-4954' '(gnl|cdd|35378 : 175.0) no description available & (at3g48300 : 117.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily A, polypeptide 23" (CYP71A23); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 26 (TAIR:AT3G48270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o81973|c93a3_soybn : 112.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 97.3) no description available & (reliability: 226.0) & (original description: Putative CYP9, Description = Cytochrome P450 750A1 family, PFAM = PF00067)' T '16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben044scf00029569ctg003_14856-19075' '(gnl|cdd|35378 : 480.0) no description available & (q9sbq9|f3ph_pethy : 343.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (at5g57260 : 337.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 10" (CYP71B10); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32483 Blast hits to 32205 proteins in 1643 species: Archae - 48; Bacteria - 3002; Metazoa - 11999; Fungi - 6846; Plants - 9547; Viruses - 3; Other Eukaryotes - 1038 (source: NCBI BLink). & (gnl|cdd|84486 : 324.0) no description available & (reliability: 672.0) & (original description: Putative CYP9, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben044scf00052783ctg002_586-4968' '(at4g12300 : 459.0) member of CYP706A; "cytochrome P450, family 706, subfamily A, polypeptide 4" (CYP706A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 33926 Blast hits to 33601 proteins in 1707 species: Archae - 58; Bacteria - 3741; Metazoa - 11926; Fungi - 7434; Plants - 9483; Viruses - 3; Other Eukaryotes - 1281 (source: NCBI BLink). & (gnl|cdd|35378 : 430.0) no description available & (gnl|cdd|84486 : 294.0) no description available & (q42798|c93a1_soybn : 290.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 918.0) & (original description: Putative CYP7, Description = Cytochrome P450, PFAM = PF00067)' T '16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf00072_271492-280631' '(gnl|cdd|35378 : 455.0) no description available & (p37117|c71a4_solme : 370.0) Cytochrome P450 71A4 (EC 1.14.-.-) (CYPLXXIA4) (P-450EG2) - Solanum melongena (Eggplant) (Aubergine) & (at4g36220 : 356.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (gnl|cdd|84486 : 293.0) no description available & (reliability: 704.0) & (original description: Putative CYP3, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf00922_49304-52888' '(gnl|cdd|35378 : 490.0) no description available & (at4g36220 : 333.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (o81973|c93a3_soybn : 331.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 302.0) no description available & (reliability: 658.0) & (original description: Putative CYP9, Description = Cytochrome P450, PFAM = PF00067)' T '16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf00974_125656-133280' '(q9sbq9|f3ph_pethy : 839.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (at5g07990 : 673.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (gnl|cdd|35378 : 485.0) no description available & (gnl|cdd|84486 : 323.0) no description available & (reliability: 1346.0) & (original description: Putative f3', Description = Flavonoid 3'-hydroxylase, PFAM = PF00067)' T '16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf01065_834359-838956' '(gnl|cdd|35378 : 487.0) no description available & (at4g36220 : 322.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (p48418|c75a1_pethy : 321.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 309.0) no description available & (reliability: 596.0) & (original description: Putative CYP9, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf01276_573705-578113' '(gnl|cdd|35378 : 474.0) no description available & (at5g07990 : 364.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (o81973|c93a3_soybn : 354.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 319.0) no description available & (reliability: 728.0) & (original description: Putative f3'h, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf01732_99312-103516' '(gnl|cdd|35378 : 441.0) no description available & (at4g12320 : 419.0) member of CYP706A; "cytochrome P450, family 706, subfamily A, polypeptide 6" (CYP706A6); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 4 (TAIR:AT4G12300.1); Has 33870 Blast hits to 33549 proteins in 1704 species: Archae - 58; Bacteria - 3712; Metazoa - 11941; Fungi - 7375; Plants - 9569; Viruses - 3; Other Eukaryotes - 1212 (source: NCBI BLink). & (gnl|cdd|84486 : 307.0) no description available & (q42798|c93a1_soybn : 266.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 828.0) & (original description: Putative CYP1, Description = Flavonoid 3'-monooxygenase, PFAM = PF00067)' T '16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf01732_207515-211624' '(gnl|cdd|35378 : 445.0) no description available & (at4g12300 : 443.0) member of CYP706A; "cytochrome P450, family 706, subfamily A, polypeptide 4" (CYP706A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 33926 Blast hits to 33601 proteins in 1707 species: Archae - 58; Bacteria - 3741; Metazoa - 11926; Fungi - 7434; Plants - 9483; Viruses - 3; Other Eukaryotes - 1281 (source: NCBI BLink). & (gnl|cdd|84486 : 309.0) no description available & (o81973|c93a3_soybn : 296.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (reliability: 886.0) & (original description: Putative f3'5'h, Description = Flavonoid 3',5'-hydroxylase, PFAM = PF00067)' T '16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf01732_211221-217167' '(at4g12300 : 460.0) member of CYP706A; "cytochrome P450, family 706, subfamily A, polypeptide 4" (CYP706A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 33926 Blast hits to 33601 proteins in 1707 species: Archae - 58; Bacteria - 3741; Metazoa - 11926; Fungi - 7434; Plants - 9483; Viruses - 3; Other Eukaryotes - 1281 (source: NCBI BLink). & (gnl|cdd|35378 : 441.0) no description available & (q42798|c93a1_soybn : 306.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|84486 : 298.0) no description available & (reliability: 920.0) & (original description: Putative CYP1, Description = Cytochrome P450, putative, PFAM = PF00067)' T '16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf01732_220591-224985' '(at4g12300 : 607.0) member of CYP706A; "cytochrome P450, family 706, subfamily A, polypeptide 4" (CYP706A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 33926 Blast hits to 33601 proteins in 1707 species: Archae - 58; Bacteria - 3741; Metazoa - 11926; Fungi - 7434; Plants - 9483; Viruses - 3; Other Eukaryotes - 1281 (source: NCBI BLink). & (gnl|cdd|35378 : 473.0) no description available & (o81973|c93a3_soybn : 332.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 305.0) no description available & (reliability: 1214.0) & (original description: Putative CYP7, Description = Cytochrome P450, PFAM = PF00067)' T '16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf01748_237083-252034' '(gnl|cdd|35378 : 455.0) no description available & (at5g07990 : 392.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (q9sbq9|f3ph_pethy : 371.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 309.0) no description available & (reliability: 784.0) & (original description: Putative cyp07, Description = Cytochrome P450 mono-oxygenase, PFAM = PF00067)' T '16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf02749_118224-122995' '(gnl|cdd|35378 : 479.0) no description available & (at5g07990 : 422.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (p48418|c75a1_pethy : 396.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 301.0) no description available & (reliability: 844.0) & (original description: Putative CYP75B1, Description = Flavonoid 3'-monooxygenase, PFAM = PF00067)' T '16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf04011_433992-437985' '(gnl|cdd|35378 : 483.0) no description available & (at4g36220 : 374.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (q9sbq9|f3ph_pethy : 344.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 311.0) no description available & (reliability: 690.0) & (original description: Putative f5h, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf10999_180566-185459' '(gnl|cdd|35378 : 468.0) no description available & (at5g07990 : 370.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (p48418|c75a1_pethy : 357.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 330.0) no description available & (reliability: 740.0) & (original description: Putative f3', Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '16.8.3.3' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3''-monooxygenase' 'niben101scf14625_267336-272343' '(p48419|c75a3_pethy : 915.0) Flavonoid 3',5'-hydroxylase 2 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A3) (CYPLXXVA3) - Petunia hybrida (Petunia) & (at5g07990 : 502.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (gnl|cdd|35378 : 468.0) no description available & (gnl|cdd|84486 : 364.0) no description available & (reliability: 1004.0) & (original description: Putative f3', Description = Flavonoid 3'-hydroxylase, PFAM = PF00067)' T '16.8.3.4' 'secondary metabolism.flavonoids.dihydroflavonols.flavonoid 3',5'-hydroxylase' '' '' '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'nbv0.3scaffold12564_428-3600' '(at4g33360 : 233.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (reliability: 466.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = )' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'nbv0.3scaffold103014_420-3677' '(at2g36800 : 440.0) Encodes a DON-Glucosyltransferase. The UGT73C5 glucosylates both brassinolide and castasterone in the 23-O position. The enzyme is presumably involved in the homeostasis of those steroid hormones hence regulating BR activity. Transgenic plants overexpressing UGT73C5 show a typical BR-deficient phenotype.; don-glucosyltransferase 1 (DOGT1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73C6 (TAIR:AT2G36790.1); Has 7663 Blast hits to 7564 proteins in 401 species: Archae - 0; Bacteria - 196; Metazoa - 2172; Fungi - 32; Plants - 5134; Viruses - 64; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 215.0) no description available & (p56725|zox_phavu : 135.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 90.8) no description available & (reliability: 848.0) & (original description: Putative UGT73C3, Description = UDP-glycosyltransferase 73C3, PFAM = PF00201)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'nbv0.5scaffold740_561201-569836' '(at2g15490 : 159.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (q8rxa5|czog2_maize : 132.0) Cis-zeatin O-glucosyltransferase 2 (EC 2.4.1.215) (cisZOG2) - Zea mays (Maize) & (gnl|cdd|36406 : 130.0) no description available & (gnl|cdd|79510 : 83.8) no description available & (reliability: 296.0) & (original description: Putative UGT95B1, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'nbv0.5scaffold1644_83462-88456' '(at3g50210 : 399.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: aging, cellular response to starvation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G49630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 204.0) no description available & (gnl|cdd|33294 : 190.0) no description available & (q41452|fls_soltu : 85.9) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Solanum tuberosum (Potato) & (reliability: 798.0) & (original description: Putative DIN11, Description = Flavonol synthase-like protein, PFAM = PF14226;PF03171)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'nbv0.5scaffold1760_72749-78530' '(at4g33360 : 466.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (gnl|cdd|36715 : 216.0) no description available & (gnl|cdd|30800 : 137.0) no description available & (reliability: 932.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = PF01370)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'nbv0.5scaffold2566_290333-315175' '(at4g25310 : 209.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G25300.1); Has 8508 Blast hits to 8467 proteins in 1001 species: Archae - 0; Bacteria - 1107; Metazoa - 113; Fungi - 987; Plants - 4952; Viruses - 0; Other Eukaryotes - 1349 (source: NCBI BLink). & (gnl|cdd|35365 : 181.0) no description available & (q8rvf5|gaox2_orysa : 124.0) Gibberellin 20 oxidase 2 (EC 1.14.11.-) (Gibberellin C-20 oxidase 2) (GA 20-oxidase 2) (Os20ox2) (Semidwarf-1 protein) - Oryza sativa (Rice) & (gnl|cdd|33294 : 105.0) no description available & (reliability: 418.0) & (original description: Putative CODM, Description = Protein SRG1, PFAM = PF03171)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben044scf00021540ctg000_49997-55189' '(at4g33360 : 389.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (gnl|cdd|36715 : 205.0) no description available & (gnl|cdd|30800 : 128.0) no description available & (reliability: 778.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = PF01370)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben044scf00024329ctg002_10796-15193' '(at4g33360 : 240.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (gnl|cdd|36715 : 155.0) no description available & (gnl|cdd|30800 : 102.0) no description available & (reliability: 480.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = PF01073)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben044scf00033957ctg002_12343-17131' '(at4g25300 : 298.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G25310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 225.0) no description available & (gnl|cdd|33294 : 132.0) no description available & (o04705|gao1d_wheat : 122.0) Gibberellin 20 oxidase 1-D (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-D) (GA 20-oxidase 1-D) (Ta20ox1D) (TaGA20ox1-D) (Protein Wga20) - Triticum aestivum (Wheat) & (reliability: 596.0) & (original description: Putative CODM, Description = Protein SRG1, PFAM = PF03171;PF14226)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben044scf00043806ctg008_4003-7409' '(at4g25310 : 381.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G25300.1); Has 8508 Blast hits to 8467 proteins in 1001 species: Archae - 0; Bacteria - 1107; Metazoa - 113; Fungi - 987; Plants - 4952; Viruses - 0; Other Eukaryotes - 1349 (source: NCBI BLink). & (gnl|cdd|35365 : 304.0) no description available & (q07512|fls_pethy : 185.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Petunia hybrida (Petunia) & (gnl|cdd|33294 : 173.0) no description available & (reliability: 762.0) & (original description: Putative DIOX2, Description = Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase, PFAM = PF03171;PF14226)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben044scf00043806ctg008_4171-6115' '(at1g17020 : 135.0) Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene.; senescence-related gene 1 (SRG1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G17010.1); Has 8560 Blast hits to 8517 proteins in 996 species: Archae - 0; Bacteria - 1133; Metazoa - 115; Fungi - 988; Plants - 4970; Viruses - 0; Other Eukaryotes - 1354 (source: NCBI BLink). & (gnl|cdd|35365 : 109.0) no description available & (reliability: 270.0) & (original description: Putative CODM, Description = Protein SRG1, PFAM = PF14226)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben044scf00054552ctg000_2950-7897' '(at1g17020 : 397.0) Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene.; senescence-related gene 1 (SRG1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G17010.1); Has 8560 Blast hits to 8517 proteins in 996 species: Archae - 0; Bacteria - 1133; Metazoa - 115; Fungi - 988; Plants - 4970; Viruses - 0; Other Eukaryotes - 1354 (source: NCBI BLink). & (gnl|cdd|35365 : 324.0) no description available & (q40634|acco1_orysa : 183.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) - Oryza sativa (Rice) & (gnl|cdd|33294 : 172.0) no description available & (reliability: 794.0) & (original description: Putative SRG1, Description = Protein SRG1, PFAM = PF03171;PF14226)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf00219_103101-108882' '(at4g33360 : 454.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (gnl|cdd|36715 : 209.0) no description available & (gnl|cdd|30800 : 130.0) no description available & (reliability: 908.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = PF01370)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf00238_1134877-1142518' '(gnl|cdd|35365 : 305.0) no description available & (at3g60290 : 238.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to karrikin, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G44800.1); Has 8462 Blast hits to 8411 proteins in 989 species: Archae - 0; Bacteria - 1081; Metazoa - 111; Fungi - 1027; Plants - 4887; Viruses - 0; Other Eukaryotes - 1356 (source: NCBI BLink). & (q06942|fl3h_maldo : 195.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 162.0) no description available & (reliability: 476.0) & (original description: Putative DMR6, Description = Protein DOWNY MILDEW RESISTANCE 6, PFAM = PF03171;PF14226)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf00560_516677-523047' '(p56725|zox_phavu : 398.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36780 : 160.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 157.0) no description available & (gnl|cdd|79510 : 81.9) no description available & (reliability: 288.0) & (original description: Putative PGSC0003DMG400032511, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf00669_13794-17254' '(at2g36750 : 585.0) UDP-glucosyl transferase 73C1 (UGT73C1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: don-glucosyltransferase 1 (TAIR:AT2G36800.1); Has 7705 Blast hits to 7611 proteins in 415 species: Archae - 0; Bacteria - 205; Metazoa - 2197; Fungi - 31; Plants - 5129; Viruses - 79; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|36406 : 251.0) no description available & (p56725|zox_phavu : 192.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 83.8) no description available & (reliability: 1098.0) & (original description: Putative UGT73C1, Description = UDP-glycosyltransferase 73C1, PFAM = PF00201)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf01005_217574-221498' '(gnl|cdd|35365 : 282.0) no description available & (at2g36690 : 235.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G60290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33294 : 177.0) no description available & (p51091|ldox_maldo : 173.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 434.0) & (original description: Putative F3H2, Description = F3H2 protein, PFAM = PF03171;PF14226)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf01158_165158-169483' '(at3g21420 : 526.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: senescence-related gene 1 (TAIR:AT1G17020.1); Has 8953 Blast hits to 8890 proteins in 1011 species: Archae - 0; Bacteria - 1172; Metazoa - 113; Fungi - 1056; Plants - 5016; Viruses - 0; Other Eukaryotes - 1596 (source: NCBI BLink). & (gnl|cdd|35365 : 325.0) no description available & (p51091|ldox_maldo : 208.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 182.0) no description available & (reliability: 1052.0) & (original description: Putative EFE, Description = Ethylene-forming enzyme, PFAM = PF14226;PF03171)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf02107_721920-728118' '(at1g17020 : 331.0) Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene.; senescence-related gene 1 (SRG1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G17010.1); Has 8560 Blast hits to 8517 proteins in 996 species: Archae - 0; Bacteria - 1133; Metazoa - 115; Fungi - 988; Plants - 4970; Viruses - 0; Other Eukaryotes - 1354 (source: NCBI BLink). & (gnl|cdd|35365 : 285.0) no description available & (q41452|fls_soltu : 182.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Solanum tuberosum (Potato) & (gnl|cdd|33294 : 159.0) no description available & (reliability: 662.0) & (original description: Putative SRG1, Description = Protein SRG1, PFAM = PF14226;PF03171)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf02271_286487-290986' '(gnl|cdd|35365 : 303.0) no description available & (at5g24530 : 249.0) Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew.; DOWNY MILDEW RESISTANT 6 (DMR6); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to fungus, response to bacterium, flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q06942|fl3h_maldo : 210.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 162.0) no description available & (reliability: 496.0) & (original description: Putative DMR6, Description = Protein DOWNY MILDEW RESISTANCE 6, PFAM = PF14226;PF03171)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf02367_16129-20520' '(at4g33360 : 289.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (gnl|cdd|36715 : 90.7) no description available & (reliability: 578.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = PF01370)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf02502_884002-887483' '(at2g36800 : 452.0) Encodes a DON-Glucosyltransferase. The UGT73C5 glucosylates both brassinolide and castasterone in the 23-O position. The enzyme is presumably involved in the homeostasis of those steroid hormones hence regulating BR activity. Transgenic plants overexpressing UGT73C5 show a typical BR-deficient phenotype.; don-glucosyltransferase 1 (DOGT1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73C6 (TAIR:AT2G36790.1); Has 7663 Blast hits to 7564 proteins in 401 species: Archae - 0; Bacteria - 196; Metazoa - 2172; Fungi - 32; Plants - 5134; Viruses - 64; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 219.0) no description available & (p56725|zox_phavu : 143.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 93.5) no description available & (reliability: 872.0) & (original description: Putative UGT19, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf02575_92373-97705' '(at3g50210 : 512.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: aging, cellular response to starvation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G49630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 263.0) no description available & (gnl|cdd|33294 : 244.0) no description available & (q41452|fls_soltu : 114.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Solanum tuberosum (Potato) & (reliability: 1024.0) & (original description: Putative At3g50210, Description = Probable 2-oxoglutarate-dependent dioxygenase At3g49630, PFAM = PF03171;PF14226)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf03046_382182-385779' '(at2g36770 : 481.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7907 Blast hits to 7812 proteins in 435 species: Archae - 0; Bacteria - 273; Metazoa - 2293; Fungi - 33; Plants - 5130; Viruses - 108; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 225.0) no description available & (p56725|zox_phavu : 185.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 82.7) no description available & (reliability: 898.0) & (original description: Putative UGT73D1, Description = UDP-glycosyltransferase 73D1, PFAM = PF00201)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf03223_17098-20573' '(at2g15490 : 363.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 205.0) no description available & (p56725|zox_phavu : 161.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 90.0) no description available & (reliability: 678.0) & (original description: Putative GmSGT2, Description = Soyasapogenol B glucuronide galactosyltransferase, PFAM = PF00201)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf03446_994486-997943' '(gnl|cdd|35365 : 277.0) no description available & (at2g36690 : 226.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G60290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p51091|ldox_maldo : 172.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 169.0) no description available & (reliability: 410.0) & (original description: Putative F3H2, Description = F3H2 protein, PFAM = PF03171;PF14226)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf04233_156881-161612' '(at1g17020 : 395.0) Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene.; senescence-related gene 1 (SRG1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G17010.1); Has 8560 Blast hits to 8517 proteins in 996 species: Archae - 0; Bacteria - 1133; Metazoa - 115; Fungi - 988; Plants - 4970; Viruses - 0; Other Eukaryotes - 1354 (source: NCBI BLink). & (gnl|cdd|35365 : 321.0) no description available & (q05964|fl3h_diaca : 180.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|33294 : 171.0) no description available & (reliability: 790.0) & (original description: Putative SRG1, Description = Protein SRG1, PFAM = PF14226;PF03171)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf04875_238020-242096' '(at2g36780 : 572.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 238.0) no description available & (p56725|zox_phavu : 165.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 80.8) no description available & (reliability: 1076.0) & (original description: Putative UGT73C3, Description = UDP-glycosyltransferase 73C3, PFAM = PF00201)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf04918_654737-658482' '(at5g20400 : 347.0) encodes a protein whose sequence is similar to flavanone 3 hydroxylase from Malus.; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G49390.1); Has 8498 Blast hits to 8450 proteins in 980 species: Archae - 0; Bacteria - 1051; Metazoa - 121; Fungi - 1005; Plants - 4926; Viruses - 0; Other Eukaryotes - 1395 (source: NCBI BLink). & (gnl|cdd|35365 : 281.0) no description available & (q07512|fls_pethy : 178.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Petunia hybrida (Petunia) & (gnl|cdd|33294 : 157.0) no description available & (reliability: 684.0) & (original description: Putative EFE, Description = EFE, PFAM = PF03171;PF14226)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf05135_458342-463461' '(at3g50210 : 379.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: aging, cellular response to starvation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G49630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 205.0) no description available & (gnl|cdd|33294 : 191.0) no description available & (reliability: 758.0) & (original description: Putative DIN11, Description = Flavonol synthase-like protein, PFAM = PF03171;PF14226)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf05151_26530-30109' '(at2g44800 : 439.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G60290.1); Has 8435 Blast hits to 8385 proteins in 967 species: Archae - 0; Bacteria - 1060; Metazoa - 91; Fungi - 1008; Plants - 4904; Viruses - 0; Other Eukaryotes - 1372 (source: NCBI BLink). & (gnl|cdd|35365 : 291.0) no description available & (p28038|fl3h_horvu : 158.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Hordeum vulgare (Barley) & (gnl|cdd|33294 : 147.0) no description available & (reliability: 878.0) & (original description: Putative At2g44800, Description = 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein, PFAM = PF03171;PF14226)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf06611_70908-86459' '(at4g33360 : 378.0) Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.; farnesol dehydrogenase (FLDH); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1). & (gnl|cdd|36715 : 126.0) no description available & (gnl|cdd|30800 : 93.1) no description available & (reliability: 756.0) & (original description: Putative FLDH, Description = Putative dihydroflavonol-4-reductase, PFAM = PF01073)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf06809_159204-163275' '(at2g36760 : 513.0) UDP-glucosyl transferase 73C2 (UGT73C2); FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: flower, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7948 Blast hits to 7837 proteins in 437 species: Archae - 0; Bacteria - 325; Metazoa - 2303; Fungi - 35; Plants - 5121; Viruses - 97; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36406 : 258.0) no description available & (p56725|zox_phavu : 150.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 81.5) no description available & (reliability: 968.0) & (original description: Putative UGT73C2, Description = UDP-glycosyltransferase 73C2, PFAM = PF00201)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf08195_330773-334766' '(at4g25310 : 377.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G25300.1); Has 8508 Blast hits to 8467 proteins in 1001 species: Archae - 0; Bacteria - 1107; Metazoa - 113; Fungi - 987; Plants - 4952; Viruses - 0; Other Eukaryotes - 1349 (source: NCBI BLink). & (gnl|cdd|35365 : 305.0) no description available & (q07512|fls_pethy : 177.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Petunia hybrida (Petunia) & (gnl|cdd|33294 : 173.0) no description available & (reliability: 754.0) & (original description: Putative DIOX2, Description = Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase, PFAM = PF03171;PF14226)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf08195_348435-352938' '(at1g17020 : 380.0) Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene.; senescence-related gene 1 (SRG1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G17010.1); Has 8560 Blast hits to 8517 proteins in 996 species: Archae - 0; Bacteria - 1133; Metazoa - 115; Fungi - 988; Plants - 4970; Viruses - 0; Other Eukaryotes - 1354 (source: NCBI BLink). & (gnl|cdd|35365 : 301.0) no description available & (o04706|gao1b_wheat : 176.0) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (gnl|cdd|33294 : 163.0) no description available & (reliability: 760.0) & (original description: Putative SRG1, Description = Protein SRG1, PFAM = PF03171;PF14226)' T '16.8.4' 'secondary metabolism.flavonoids.flavonols' 'niben101scf12205_494417-499205' '(at1g17020 : 359.0) Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene.; senescence-related gene 1 (SRG1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G17010.1); Has 8560 Blast hits to 8517 proteins in 996 species: Archae - 0; Bacteria - 1133; Metazoa - 115; Fungi - 988; Plants - 4970; Viruses - 0; Other Eukaryotes - 1354 (source: NCBI BLink). & (gnl|cdd|35365 : 286.0) no description available & (o04706|gao1b_wheat : 165.0) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (gnl|cdd|33294 : 160.0) no description available & (reliability: 718.0) & (original description: Putative CODM, Description = Protein SRG1, PFAM = PF03171;PF14226)' T '16.8.4.1' 'secondary metabolism.flavonoids.flavonols.flavonol synthase (FLS)' 'niben101scf02429_595256-608361' '(q07512|fls_pethy : 574.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Petunia hybrida (Petunia) & (at5g08640 : 386.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (gnl|cdd|35365 : 299.0) no description available & (gnl|cdd|33294 : 156.0) no description available & (reliability: 772.0) & (original description: Putative FL, Description = Flavonol synthase/flavanone 3-hydroxylase, PFAM = PF03171;PF14226)' T '16.8.4.1' 'secondary metabolism.flavonoids.flavonols.flavonol synthase (FLS)' 'niben101scf03590_104512-107677' '(gnl|cdd|35365 : 194.0) no description available & (gnl|cdd|33294 : 136.0) no description available & (at5g08640 : 129.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o04847|dv4h_catro : 121.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 258.0) & (original description: Putative GA7ox1, Description = Flavonol synthase/flavanone 3-hydroxylase, PFAM = PF03171;PF14226)' T '16.8.4.1' 'secondary metabolism.flavonoids.flavonols.flavonol synthase (FLS)' 'niben101scf03590_173893-177150' '(gnl|cdd|35365 : 207.0) no description available & (gnl|cdd|33294 : 177.0) no description available & (at5g08640 : 138.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o48882|acco2_maldo : 128.0) 1-aminocyclopropane-1-carboxylate oxidase 2 (EC 1.14.17.4) (ACC oxidase 2) (Ethylene-forming enzyme) (EFE) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 276.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T '16.8.4.1' 'secondary metabolism.flavonoids.flavonols.flavonol synthase (FLS)' 'niben101scf10671_31679-34844' '(gnl|cdd|35365 : 197.0) no description available & (gnl|cdd|33294 : 133.0) no description available & (at5g08640 : 128.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o04847|dv4h_catro : 121.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 256.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T '16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'nbv0.3scaffold7598_49131-52525' '(p56725|zox_phavu : 447.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36770 : 192.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7907 Blast hits to 7812 proteins in 435 species: Archae - 0; Bacteria - 273; Metazoa - 2293; Fungi - 33; Plants - 5130; Viruses - 108; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 141.0) no description available & (gnl|cdd|79510 : 88.5) no description available & (reliability: 346.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T '16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'nbv0.5scaffold121_97229-100296' '(p56725|zox_phavu : 218.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at3g46670 : 117.0) UDP-glucosyl transferase 76E11 (UGT76E11); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 76E12 (TAIR:AT3G46660.1); Has 7711 Blast hits to 7649 proteins in 441 species: Archae - 0; Bacteria - 362; Metazoa - 2148; Fungi - 33; Plants - 5036; Viruses - 65; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36406 : 84.2) no description available & (reliability: 234.0) & (original description: Putative ZOG2, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'nbv0.5scaffold740_561201-569836' '(at2g15490 : 159.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (q8rxa5|czog2_maize : 132.0) Cis-zeatin O-glucosyltransferase 2 (EC 2.4.1.215) (cisZOG2) - Zea mays (Maize) & (gnl|cdd|36406 : 130.0) no description available & (gnl|cdd|79510 : 83.8) no description available & (reliability: 304.0) & (original description: Putative UGT95B1, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben044scf00007578ctg015_10313-13671' '(at5g49690 : 206.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 186.0) no description available & (q43716|ufog_pethy : 182.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|79510 : 93.9) no description available & (reliability: 372.0) & (original description: Putative UGT94E5, Description = Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase, PFAM = PF00201)' T '16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben101scf00492_135541-138914' '(p56725|zox_phavu : 485.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g31750 : 192.0) UDP-glucosyl transferase 74D1 (UGT74D1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8199 Blast hits to 8111 proteins in 470 species: Archae - 0; Bacteria - 484; Metazoa - 2414; Fungi - 25; Plants - 5092; Viruses - 117; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36406 : 168.0) no description available & (gnl|cdd|79510 : 91.5) no description available & (reliability: 356.0) & (original description: Putative ZOG3, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben101scf01763_82416-85828' '(at5g49690 : 205.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 185.0) no description available & (q43716|ufog_pethy : 182.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|79510 : 95.8) no description available & (reliability: 372.0) & (original description: Putative UGT94E5, Description = Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase, PFAM = PF00201)' T '16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben101scf02476_340145-343635' '(at2g15480 : 339.0) UDP-glucosyl transferase 73B5 (UGT73B5); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 73B4 (TAIR:AT2G15490.3). & (gnl|cdd|36406 : 183.0) no description available & (p56725|zox_phavu : 164.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 636.0) & (original description: Putative GAME2, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben101scf02476_370700-374205' '(at4g34135 : 330.0) The At4g34135 gene encodes a flavonol 7-O-glucosyltransferase (EC 2.4.1.237) that glucosylates also with a 20 fold lower activity flavonols (kaempferol and quercetin) at the 3-O-position.; UDP-glucosyltransferase 73B2 (UGT73B2); FUNCTIONS IN: flavonol 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: flavonol biosynthetic process, response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B3 (TAIR:AT4G34131.1); Has 4778 Blast hits to 4740 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 4776; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|36406 : 210.0) no description available & (p56725|zox_phavu : 143.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|32004 : 103.0) no description available & (reliability: 660.0) & (original description: Putative SAP1, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben101scf03223_17098-20573' '(at2g15490 : 363.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 205.0) no description available & (p56725|zox_phavu : 161.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 90.0) no description available & (reliability: 706.0) & (original description: Putative GmSGT2, Description = Soyasapogenol B glucuronide galactosyltransferase, PFAM = PF00201)' T '16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben101scf03709_478859-482389' '(p56725|zox_phavu : 342.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g15480 : 157.0) UDP-glucosyl transferase 73B5 (UGT73B5); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 73B4 (TAIR:AT2G15490.3). & (gnl|cdd|36406 : 143.0) no description available & (gnl|cdd|79510 : 86.5) no description available & (reliability: 286.0) & (original description: Putative GT2, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben101scf06344_38693-42120' '(at4g34131 : 530.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 234.0) no description available & (p56725|zox_phavu : 201.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 91.2) no description available & (reliability: 1012.0) & (original description: Putative TOGT1, Description = Scopoletin glucosyltransferase, PFAM = PF00201)' T '16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben101scf07563_250606-253929' '(at4g34131 : 490.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 243.0) no description available & (p56725|zox_phavu : 179.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 912.0) & (original description: Putative TOGT1, Description = Scopoletin glucosyltransferase, PFAM = PF00201)' T '16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben101scf11008_286968-290814' '(p56725|zox_phavu : 483.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34131 : 177.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 137.0) no description available & (gnl|cdd|79510 : 89.6) no description available & (reliability: 322.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T '16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben101scf12290_140493-145341' '(p56725|zox_phavu : 360.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34138 : 181.0) UDP-glucosyl transferase 73B1 (UGT73B1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B3 (TAIR:AT4G34131.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 133.0) no description available & (reliability: 332.0) & (original description: Putative PGSC0003DMG400016773, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben101scf12290_157761-160507' '(p56725|zox_phavu : 270.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34138 : 164.0) UDP-glucosyl transferase 73B1 (UGT73B1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B3 (TAIR:AT4G34131.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 110.0) no description available & (gnl|cdd|79510 : 81.1) no description available & (reliability: 300.0) & (original description: Putative GT2, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben101scf12919_56571-60157' '(at4g34131 : 503.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 242.0) no description available & (p56725|zox_phavu : 186.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 93.1) no description available & (reliability: 978.0) & (original description: Putative gt5, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.4.2' 'secondary metabolism.flavonoids.flavonols.flavonol 3-O-glycosyltransferase' 'niben101scf12919_165422-168849' '(at4g34131 : 535.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 229.0) no description available & (p56725|zox_phavu : 202.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 95.4) no description available & (reliability: 1020.0) & (original description: Putative TOGT1, Description = Scopoletin glucosyltransferase, PFAM = PF00201)' T '16.8.4.3' 'secondary metabolism.flavonoids.flavonols.flavonol-3-O-rhamnosyltransferase' 'nbv0.5scaffold2277_44958-49667' '(at5g17050 : 445.0) The At5g17050 encodes a anthocyanidin 3-O-glucosyltransferase which specifically glucosylates the 3-position of the flavonoid C-ring. Anthocyanidins such as cyanidin and pelargonidin as well as flavonols such as kaempferol and quercetin are accepted substrates.; UDP-glucosyl transferase 78D2 (UGT78D2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 78D3 (TAIR:AT5G17030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43641|ufog_solme : 340.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|36406 : 185.0) no description available & (gnl|cdd|79510 : 147.0) no description available & (reliability: 890.0) & (original description: Putative bz, Description = Glycosyltransferase, PFAM = PF00201)' T '16.8.4.3' 'secondary metabolism.flavonoids.flavonols.flavonol-3-O-rhamnosyltransferase' 'niben101scf00906_67102-70705' '(q43641|ufog_solme : 613.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (at5g17050 : 424.0) The At5g17050 encodes a anthocyanidin 3-O-glucosyltransferase which specifically glucosylates the 3-position of the flavonoid C-ring. Anthocyanidins such as cyanidin and pelargonidin as well as flavonols such as kaempferol and quercetin are accepted substrates.; UDP-glucosyl transferase 78D2 (UGT78D2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 78D3 (TAIR:AT5G17030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 189.0) no description available & (gnl|cdd|79510 : 140.0) no description available & (reliability: 848.0) & (original description: Putative GT, Description = Anthocyanidin 3-O-glucosyltransferase, PFAM = PF00201)' T '16.8.4.3' 'secondary metabolism.flavonoids.flavonols.flavonol-3-O-rhamnosyltransferase' 'niben101scf05307_3296-6624' '(q43641|ufog_solme : 605.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (at5g17050 : 413.0) The At5g17050 encodes a anthocyanidin 3-O-glucosyltransferase which specifically glucosylates the 3-position of the flavonoid C-ring. Anthocyanidins such as cyanidin and pelargonidin as well as flavonols such as kaempferol and quercetin are accepted substrates.; UDP-glucosyl transferase 78D2 (UGT78D2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 78D3 (TAIR:AT5G17030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 188.0) no description available & (gnl|cdd|79510 : 135.0) no description available & (reliability: 826.0) & (original description: Putative GT, Description = Anthocyanidin 3-O-glucosyltransferase, PFAM = PF00201)' T '16.8.5' 'secondary metabolism.flavonoids.isoflavones' '' '' '16.8.5.1' 'secondary metabolism.flavonoids.isoflavones.isoflavone reductase' 'nbv0.3scaffold28774_18472-25361' '(at4g34540 : 339.0) encodes a protein whose sequence is similar to pinoresinol-lariciresinol reductase from pine.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: pinoresinol reductase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 2050 Blast hits to 2046 proteins in 499 species: Archae - 10; Bacteria - 767; Metazoa - 6; Fungi - 470; Plants - 578; Viruses - 7; Other Eukaryotes - 212 (source: NCBI BLink). & (p52579|ifrh_tobac : 254.0) Isoflavone reductase homolog A622 (EC 1.3.1.-) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|86857 : 190.0) no description available & (reliability: 678.0) & (original description: Putative PLR3, Description = Probable pinoresinol-lariciresinol reductase 3, PFAM = PF05368)' T '16.8.5.1' 'secondary metabolism.flavonoids.isoflavones.isoflavone reductase' 'nbv0.5scaffold704_10265-17180' '(at4g34540 : 387.0) encodes a protein whose sequence is similar to pinoresinol-lariciresinol reductase from pine.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: pinoresinol reductase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 2050 Blast hits to 2046 proteins in 499 species: Archae - 10; Bacteria - 767; Metazoa - 6; Fungi - 470; Plants - 578; Viruses - 7; Other Eukaryotes - 212 (source: NCBI BLink). & (p52579|ifrh_tobac : 288.0) Isoflavone reductase homolog A622 (EC 1.3.1.-) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|86857 : 229.0) no description available & (reliability: 774.0) & (original description: Putative PLR3, Description = Probable pinoresinol-lariciresinol reductase 3, PFAM = PF05368)' T '16.8.5.1' 'secondary metabolism.flavonoids.isoflavones.isoflavone reductase' 'niben101ctg14704_1-2257' '(at4g34540 : 114.0) encodes a protein whose sequence is similar to pinoresinol-lariciresinol reductase from pine.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: pinoresinol reductase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 2050 Blast hits to 2046 proteins in 499 species: Archae - 10; Bacteria - 767; Metazoa - 6; Fungi - 470; Plants - 578; Viruses - 7; Other Eukaryotes - 212 (source: NCBI BLink). & (p52580|ifrh_maize : 97.1) Isoflavone reductase homolog IRL (EC 1.3.1.-) - Zea mays (Maize) & (gnl|cdd|86857 : 89.5) no description available & (reliability: 228.0) & (original description: Putative IRL, Description = AtPLR3, PFAM = PF05368)' T '16.8.5.1' 'secondary metabolism.flavonoids.isoflavones.isoflavone reductase' 'niben101scf00261_179995-182369' '(at1g32100 : 173.0) Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol.; pinoresinol reductase 1 (PRR1); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: pinoresinol reductase 2 (TAIR:AT4G13660.1); Has 2085 Blast hits to 2085 proteins in 479 species: Archae - 27; Bacteria - 779; Metazoa - 2; Fungi - 496; Plants - 600; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|86857 : 109.0) no description available & (p52578|ifrh_soltu : 95.5) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (reliability: 334.0) & (original description: Putative PLR1, Description = (+)-pinoresinol reductase, PFAM = PF05368)' T '16.8.5.1' 'secondary metabolism.flavonoids.isoflavones.isoflavone reductase' 'niben101scf01418_67513-72791' '(at1g32100 : 459.0) Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol.; pinoresinol reductase 1 (PRR1); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: pinoresinol reductase 2 (TAIR:AT4G13660.1); Has 2085 Blast hits to 2085 proteins in 479 species: Archae - 27; Bacteria - 779; Metazoa - 2; Fungi - 496; Plants - 600; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (p52578|ifrh_soltu : 273.0) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (gnl|cdd|86857 : 253.0) no description available & (reliability: 864.0) & (original description: Putative lar, Description = (+)-pinoresinol reductase, PFAM = PF05368)' T '16.8.5.1' 'secondary metabolism.flavonoids.isoflavones.isoflavone reductase' 'niben101scf01418_181246-184561' '(at1g32100 : 391.0) Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol.; pinoresinol reductase 1 (PRR1); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: pinoresinol reductase 2 (TAIR:AT4G13660.1); Has 2085 Blast hits to 2085 proteins in 479 species: Archae - 27; Bacteria - 779; Metazoa - 2; Fungi - 496; Plants - 600; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (p52578|ifrh_soltu : 258.0) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (gnl|cdd|86857 : 250.0) no description available & (reliability: 750.0) & (original description: Putative EGS1, Description = (+)-pinoresinol reductase, PFAM = PF05368)' T '16.8.5.1' 'secondary metabolism.flavonoids.isoflavones.isoflavone reductase' 'niben101scf03045_201280-204833' '(p52579|ifrh_tobac : 605.0) Isoflavone reductase homolog A622 (EC 1.3.1.-) - Nicotiana tabacum (Common tobacco) & (at4g39230 : 398.0) encodes a protein whose sequence is similar to phenylcoumaran benzylic ether reductase (PCBER), which catalyzes NADPH-dependent reduction of 8-5' linked lignans such as dehydrodiconiferyl alcohol to give isodihydrodehydrodiconiferyl alcohol.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: phenylcoumaran benzylic ether reductase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 1665 Blast hits to 1661 proteins in 371 species: Archae - 16; Bacteria - 474; Metazoa - 2; Fungi - 521; Plants - 522; Viruses - 3; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|86857 : 267.0) no description available & (reliability: 796.0) & (original description: Putative lar, Description = (+)-pinoresinol reductase, PFAM = PF05368)' T '16.8.5.1' 'secondary metabolism.flavonoids.isoflavones.isoflavone reductase' 'niben101scf03214_102534-106993' '(p52578|ifrh_soltu : 555.0) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (at4g39230 : 458.0) encodes a protein whose sequence is similar to phenylcoumaran benzylic ether reductase (PCBER), which catalyzes NADPH-dependent reduction of 8-5' linked lignans such as dehydrodiconiferyl alcohol to give isodihydrodehydrodiconiferyl alcohol.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: phenylcoumaran benzylic ether reductase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 1665 Blast hits to 1661 proteins in 371 species: Archae - 16; Bacteria - 474; Metazoa - 2; Fungi - 521; Plants - 522; Viruses - 3; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|86857 : 268.0) no description available & (reliability: 916.0) & (original description: Putative lar, Description = (+)-pinoresinol reductase, PFAM = PF05368)' T '16.8.5.1' 'secondary metabolism.flavonoids.isoflavones.isoflavone reductase' 'niben101scf03602_317172-320135' '(at4g34540 : 103.0) encodes a protein whose sequence is similar to pinoresinol-lariciresinol reductase from pine.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: pinoresinol reductase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 2050 Blast hits to 2046 proteins in 499 species: Archae - 10; Bacteria - 767; Metazoa - 6; Fungi - 470; Plants - 578; Viruses - 7; Other Eukaryotes - 212 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative PLR3, Description = Isoflavone reductase like, PFAM = )' T '16.8.5.1' 'secondary metabolism.flavonoids.isoflavones.isoflavone reductase' 'niben101scf04113_626327-630459' '(at1g75280 : 458.0) isoflavone reductase, putative, identical to SP:P52577 Isoflavone reductase homolog P3 (EC 1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile PF02716: isoflavone reductase. Involved in response to oxidative stress.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G75290.1); Has 2708 Blast hits to 2703 proteins in 629 species: Archae - 36; Bacteria - 1150; Metazoa - 16; Fungi - 663; Plants - 623; Viruses - 7; Other Eukaryotes - 213 (source: NCBI BLink). & (p52578|ifrh_soltu : 434.0) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (gnl|cdd|86857 : 290.0) no description available & (reliability: 916.0) & (original description: Putative lar, Description = (+)-pinoresinol reductase, PFAM = PF05368)' T '16.8.5.1' 'secondary metabolism.flavonoids.isoflavones.isoflavone reductase' 'niben101scf04113_690157-696884' '(at1g75280 : 422.0) isoflavone reductase, putative, identical to SP:P52577 Isoflavone reductase homolog P3 (EC 1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile PF02716: isoflavone reductase. Involved in response to oxidative stress.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G75290.1); Has 2708 Blast hits to 2703 proteins in 629 species: Archae - 36; Bacteria - 1150; Metazoa - 16; Fungi - 663; Plants - 623; Viruses - 7; Other Eukaryotes - 213 (source: NCBI BLink). & (p52578|ifrh_soltu : 407.0) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (gnl|cdd|86857 : 265.0) no description available & (reliability: 844.0) & (original description: Putative IFR, Description = Isoflavone reductase, PFAM = PF05368)' T '16.8.5.1' 'secondary metabolism.flavonoids.isoflavones.isoflavone reductase' 'niben101scf06171_324241-328396' '(at1g75280 : 456.0) isoflavone reductase, putative, identical to SP:P52577 Isoflavone reductase homolog P3 (EC 1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile PF02716: isoflavone reductase. Involved in response to oxidative stress.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G75290.1); Has 2708 Blast hits to 2703 proteins in 629 species: Archae - 36; Bacteria - 1150; Metazoa - 16; Fungi - 663; Plants - 623; Viruses - 7; Other Eukaryotes - 213 (source: NCBI BLink). & (p52578|ifrh_soltu : 436.0) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (gnl|cdd|86857 : 288.0) no description available & (reliability: 912.0) & (original description: Putative lar, Description = (+)-pinoresinol reductase, PFAM = PF05368)' T '16.8.5.1' 'secondary metabolism.flavonoids.isoflavones.isoflavone reductase' 'niben101scf07146_5222-26321' '(at4g34540 : 308.0) encodes a protein whose sequence is similar to pinoresinol-lariciresinol reductase from pine.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: pinoresinol reductase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 2050 Blast hits to 2046 proteins in 499 species: Archae - 10; Bacteria - 767; Metazoa - 6; Fungi - 470; Plants - 578; Viruses - 7; Other Eukaryotes - 212 (source: NCBI BLink). & (p52579|ifrh_tobac : 228.0) Isoflavone reductase homolog A622 (EC 1.3.1.-) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|86857 : 155.0) no description available & (reliability: 616.0) & (original description: Putative PLR3, Description = Isoflavone reductase like, PFAM = PF05368;PF05368)' T '16.8.5.2' 'secondary metabolism.flavonoids.isoflavones.chalcone reductase' '' '' '16.8.5.3' 'secondary metabolism.flavonoids.isoflavones.isoflavone synthase' '' '' '16.8.5.4' 'secondary metabolism.flavonoids.isoflavones.hydroxyisoflavone dehydrogenase' '' '' '16.8.6' 'secondary metabolism.flavonoids.flavonones' '' '' '16.8.6.1' 'secondary metabolism.flavonoids.flavonones.flavone synthase (FNS)' '' '' '16.8.6.2' 'secondary metabolism.flavonoids.flavonones.flavone 7-O-glycosyltransferase' '' '' '16.8.6.3' 'secondary metabolism.flavonoids.flavonones.flavone apiosyltransferase' '' '' '16.8.7' 'secondary metabolism.flavonoids.flavan 3-ol' '' '' '16.8.7.1' 'secondary metabolism.flavonoids.flavan 3-ol.leucoanthocyanidin 4-reductase (LAR)' '' '' '16.8.8' 'secondary metabolism.flavonoids.flavonoid glycosylations' '' '' '16.8.8.1' 'secondary metabolism.flavonoids.flavonoid glycosylations.anthocyanidin-3-O-glycoside-6'-rhamnosyltransferase' '' '' '16.8.8.2' 'secondary metabolism.flavonoids.flavonoid glycosylations.flavonol-3-O-glycoside-rhamnosyltransferase' '' '' '16.10' 'secondary metabolism.simple phenols' 'nbv0.3scaffold3877_43472-47978' '(at5g05390 : 842.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 12 (LAC12); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 5 (TAIR:AT2G40370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 578.0) no description available & (p14133|aso_cucsa : 222.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 171.0) no description available & (reliability: 1684.0) & (original description: Putative lac1, Description = Benzenediol:oxygen oxidoreductase, PFAM = PF07731;PF00394;PF07732)' T '16.10' 'secondary metabolism.simple phenols' 'nbv0.3scaffold46600_12062-16385' '(at2g40370 : 859.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 5 (LAC5); FUNCTIONS IN: laccase activity; INVOLVED IN: response to copper ion; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 12 (TAIR:AT5G05390.1); Has 10120 Blast hits to 8186 proteins in 1337 species: Archae - 37; Bacteria - 4008; Metazoa - 431; Fungi - 3685; Plants - 1575; Viruses - 0; Other Eukaryotes - 384 (source: NCBI BLink). & (gnl|cdd|36477 : 626.0) no description available & (p14133|aso_cucsa : 222.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 172.0) no description available & (reliability: 1718.0) & (original description: Putative LAC12, Description = Laccase-12, PFAM = PF07732;PF07731;PF00394)' T '16.10' 'secondary metabolism.simple phenols' 'nbv0.5scaffold1490_17558-298019' '(at5g60020 : 323.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 17 (LAC17); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 2 (TAIR:AT2G29130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 218.0) no description available & (gnl|cdd|87357 : 156.0) no description available & (p24792|aso_cucma : 94.4) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 646.0) & (original description: Putative lac1, Description = Benzenediol:oxygen oxidoreductase, PFAM = PF07732;PF07731;PF00394)' T '16.10' 'secondary metabolism.simple phenols' 'nbv0.5scaffold2853_122254-125402' '(at5g09360 : 136.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 14 (LAC14); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: central cell, fruit; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 12 (TAIR:AT5G05390.1); Has 9817 Blast hits to 8551 proteins in 1490 species: Archae - 32; Bacteria - 4030; Metazoa - 479; Fungi - 3363; Plants - 1557; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink). & (gnl|cdd|36477 : 124.0) no description available & (gnl|cdd|84744 : 106.0) no description available & (reliability: 272.0) & (original description: Putative LAC, Description = Benzenediol:oxygen oxidoreductase, PFAM = PF00394)' T '16.10' 'secondary metabolism.simple phenols' 'niben044scf00011329ctg006_8085-12869' '(at5g05390 : 886.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 12 (LAC12); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 5 (TAIR:AT2G40370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 608.0) no description available & (p24792|aso_cucma : 231.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|87357 : 171.0) no description available & (reliability: 1772.0) & (original description: Putative LAC12, Description = Laccase-12, PFAM = PF00394;PF07731;PF07732)' T '16.10' 'secondary metabolism.simple phenols' 'niben044scf00017986ctg004_1-1188' '(at2g46570 : 131.0) putative laccase, a member of laccase family of genes (with 17 members in Arabidopsis).; laccase 6 (LAC6); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: shoot, hypocotyl, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 5 (TAIR:AT2G40370.1); Has 9565 Blast hits to 7786 proteins in 1266 species: Archae - 28; Bacteria - 3648; Metazoa - 481; Fungi - 3482; Plants - 1556; Viruses - 0; Other Eukaryotes - 370 (source: NCBI BLink). & (gnl|cdd|87357 : 104.0) no description available & (gnl|cdd|36477 : 102.0) no description available & (reliability: 262.0) & (original description: Putative LAC2, Description = Urishiol oxidase, PFAM = PF07732)' T '16.10' 'secondary metabolism.simple phenols' 'niben044scf00037632ctg002_13561-19682' '(at3g09220 : 678.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 7 (LAC7); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Laccase/Diphenol oxidase family protein (TAIR:AT5G01050.1); Has 10354 Blast hits to 8703 proteins in 1520 species: Archae - 53; Bacteria - 4205; Metazoa - 505; Fungi - 3603; Plants - 1597; Viruses - 0; Other Eukaryotes - 391 (source: NCBI BLink). & (gnl|cdd|36477 : 613.0) no description available & (p14133|aso_cucsa : 198.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 151.0) no description available & (reliability: 1356.0) & (original description: Putative LAC7, Description = Laccase-7, PFAM = PF07731;PF00394;PF07732)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf00066_45560-50947' '(at2g29130 : 827.0) putative laccase, knockout mutant had reduced root elongation under PEG-induced dehydration; laccase 2 (LAC2); FUNCTIONS IN: laccase activity; INVOLVED IN: response to water deprivation; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 17 (TAIR:AT5G60020.1); Has 9820 Blast hits to 8133 proteins in 1393 species: Archae - 28; Bacteria - 3936; Metazoa - 505; Fungi - 3408; Plants - 1575; Viruses - 0; Other Eukaryotes - 368 (source: NCBI BLink). & (gnl|cdd|36477 : 591.0) no description available & (q40588|aso_tobac : 216.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|87357 : 161.0) no description available & (reliability: 1654.0) & (original description: Putative LAC2, Description = Laccase-2, PFAM = PF07732;PF00394;PF07731)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf00288_512090-516348' '(at2g30210 : 741.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 3 (LAC3); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: hypocotyl, fruit, root, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 13 (TAIR:AT5G07130.1); Has 11124 Blast hits to 9161 proteins in 1586 species: Archae - 42; Bacteria - 5039; Metazoa - 506; Fungi - 3547; Plants - 1577; Viruses - 0; Other Eukaryotes - 413 (source: NCBI BLink). & (gnl|cdd|36477 : 616.0) no description available & (p24792|aso_cucma : 226.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|87357 : 167.0) no description available & (reliability: 1482.0) & (original description: Putative LAC3, Description = Laccase-3, PFAM = PF07732;PF07731;PF00394)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf00305_290192-294402' '(at5g03260 : 820.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 11 (LAC11); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Laccase/Diphenol oxidase family protein (TAIR:AT2G38080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36477 : 600.0) no description available & (p14133|aso_cucsa : 216.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 160.0) no description available & (reliability: 1640.0) & (original description: Putative LAC11, Description = Laccase-11, PFAM = PF00394;PF07731;PF07732)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf00348_642508-648481' '(at2g38080 : 873.0) Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype.; IRREGULAR XYLEM 12 (IRX12); FUNCTIONS IN: laccase activity; INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 10 (TAIR:AT5G01190.1); Has 9472 Blast hits to 8326 proteins in 1422 species: Archae - 45; Bacteria - 3703; Metazoa - 467; Fungi - 3359; Plants - 1600; Viruses - 0; Other Eukaryotes - 298 (source: NCBI BLink). & (gnl|cdd|36477 : 630.0) no description available & (p14133|aso_cucsa : 234.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 158.0) no description available & (reliability: 1746.0) & (original description: Putative IRX12, Description = Laccase-4, PFAM = PF07732;PF07731;PF00394)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf00592_27228-31839' '(at5g03260 : 850.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 11 (LAC11); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Laccase/Diphenol oxidase family protein (TAIR:AT2G38080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36477 : 614.0) no description available & (p14133|aso_cucsa : 232.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 161.0) no description available & (reliability: 1700.0) & (original description: Putative LAC11, Description = Laccase-11, PFAM = PF00394;PF07732;PF07731)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf00603_285291-289586' '(at2g46570 : 814.0) putative laccase, a member of laccase family of genes (with 17 members in Arabidopsis).; laccase 6 (LAC6); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: shoot, hypocotyl, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 5 (TAIR:AT2G40370.1); Has 9565 Blast hits to 7786 proteins in 1266 species: Archae - 28; Bacteria - 3648; Metazoa - 481; Fungi - 3482; Plants - 1556; Viruses - 0; Other Eukaryotes - 370 (source: NCBI BLink). & (gnl|cdd|36477 : 548.0) no description available & (p14133|aso_cucsa : 237.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 158.0) no description available & (reliability: 1628.0) & (original description: Putative LAC6, Description = Laccase-6, PFAM = PF00394;PF07732;PF07731)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf00960_127472-133539' '(at5g09360 : 632.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 14 (LAC14); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: central cell, fruit; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 12 (TAIR:AT5G05390.1); Has 9817 Blast hits to 8551 proteins in 1490 species: Archae - 32; Bacteria - 4030; Metazoa - 479; Fungi - 3363; Plants - 1557; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink). & (gnl|cdd|36477 : 543.0) no description available & (p24792|aso_cucma : 215.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|87357 : 143.0) no description available & (reliability: 1264.0) & (original description: Putative LAC9, Description = Putative laccase-9, PFAM = PF07732;PF00394;PF07731)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf01237_677330-681643' '(at2g40370 : 893.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 5 (LAC5); FUNCTIONS IN: laccase activity; INVOLVED IN: response to copper ion; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 12 (TAIR:AT5G05390.1); Has 10120 Blast hits to 8186 proteins in 1337 species: Archae - 37; Bacteria - 4008; Metazoa - 431; Fungi - 3685; Plants - 1575; Viruses - 0; Other Eukaryotes - 384 (source: NCBI BLink). & (gnl|cdd|36477 : 623.0) no description available & (p24792|aso_cucma : 239.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|87357 : 170.0) no description available & (reliability: 1786.0) & (original description: Putative LAC12, Description = Laccase-12, PFAM = PF00394;PF07732;PF07731)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf01738_653722-659772' '(at2g38080 : 884.0) Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype.; IRREGULAR XYLEM 12 (IRX12); FUNCTIONS IN: laccase activity; INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 10 (TAIR:AT5G01190.1); Has 9472 Blast hits to 8326 proteins in 1422 species: Archae - 45; Bacteria - 3703; Metazoa - 467; Fungi - 3359; Plants - 1600; Viruses - 0; Other Eukaryotes - 298 (source: NCBI BLink). & (gnl|cdd|36477 : 630.0) no description available & (p14133|aso_cucsa : 228.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 160.0) no description available & (reliability: 1768.0) & (original description: Putative IRX12, Description = Laccase-4, PFAM = PF07731;PF07732;PF00394)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf02456_56786-107695' '(at5g05390 : 897.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 12 (LAC12); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 5 (TAIR:AT2G40370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 622.0) no description available & (p24792|aso_cucma : 230.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|87357 : 173.0) no description available & (reliability: 1794.0) & (original description: Putative LAC12, Description = Laccase-12, PFAM = PF07731;PF07732;PF00394)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf02637_453914-457106' '(at5g48100 : 213.0) Encodes a protein that is similar to laccase-like polyphenol oxidases. Involved in lignin and flavonoids biosynthesis. It has four conserved copper binding domains. Expressed in developing testa, where it colocalizes with the flavonoid end products proanthocyanidins and flavonols. Mutant plants exhibited a delay in developmentally determined browning of the testa, characterized by the pale brown color of seed coat. The tt10 mutant seeds accumulate more epicatechin monomers and more soluble proanthocyanidins than wild-type seeds. Flavonol composition was also affected in tt10 seeds, which exhibited a higher ratio of quercetin rhamnoside monomers versus dimers than wild-type seeds.; TRANSPARENT TESTA 10 (TT10); FUNCTIONS IN: copper ion binding, laccase activity; INVOLVED IN: lignin biosynthetic process, response to copper ion, flavonoid biosynthetic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 14 (TAIR:AT5G09360.1); Has 10402 Blast hits to 8649 proteins in 1516 species: Archae - 36; Bacteria - 4416; Metazoa - 511; Fungi - 3532; Plants - 1551; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink). & (gnl|cdd|36477 : 184.0) no description available & (gnl|cdd|84744 : 88.1) no description available & (reliability: 426.0) & (original description: Putative lac2, Description = Benzenediol:oxygen oxidoreductase, PFAM = PF00394;PF07732)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf02737_46622-60878' '(at5g48100 : 580.0) Encodes a protein that is similar to laccase-like polyphenol oxidases. Involved in lignin and flavonoids biosynthesis. It has four conserved copper binding domains. Expressed in developing testa, where it colocalizes with the flavonoid end products proanthocyanidins and flavonols. Mutant plants exhibited a delay in developmentally determined browning of the testa, characterized by the pale brown color of seed coat. The tt10 mutant seeds accumulate more epicatechin monomers and more soluble proanthocyanidins than wild-type seeds. Flavonol composition was also affected in tt10 seeds, which exhibited a higher ratio of quercetin rhamnoside monomers versus dimers than wild-type seeds.; TRANSPARENT TESTA 10 (TT10); FUNCTIONS IN: copper ion binding, laccase activity; INVOLVED IN: lignin biosynthetic process, response to copper ion, flavonoid biosynthetic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 14 (TAIR:AT5G09360.1); Has 10402 Blast hits to 8649 proteins in 1516 species: Archae - 36; Bacteria - 4416; Metazoa - 511; Fungi - 3532; Plants - 1551; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink). & (gnl|cdd|36477 : 541.0) no description available & (q40588|aso_tobac : 211.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|87357 : 147.0) no description available & (reliability: 1160.0) & (original description: Putative TT10, Description = Laccase-15, PFAM = PF07732;PF00394;PF07731)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf03062_248893-261032' '(at5g05390 : 786.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 12 (LAC12); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 5 (TAIR:AT2G40370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 604.0) no description available & (gnl|cdd|87357 : 169.0) no description available & (p14133|aso_cucsa : 125.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (reliability: 1572.0) & (original description: Putative lac1, Description = Benzenediol:oxygen oxidoreductase, PFAM = PF00394;PF07732;PF07731)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf03062_248926-260913' '(at5g05390 : 625.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 12 (LAC12); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 5 (TAIR:AT2G40370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 464.0) no description available & (gnl|cdd|87357 : 170.0) no description available & (p14133|aso_cucsa : 126.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (reliability: 1250.0) & (original description: Putative lac1, Description = Benzenediol:oxygen oxidoreductase, PFAM = PF07732;PF00394)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf03325_46900-51993' '(at2g38080 : 886.0) Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype.; IRREGULAR XYLEM 12 (IRX12); FUNCTIONS IN: laccase activity; INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 10 (TAIR:AT5G01190.1); Has 9472 Blast hits to 8326 proteins in 1422 species: Archae - 45; Bacteria - 3703; Metazoa - 467; Fungi - 3359; Plants - 1600; Viruses - 0; Other Eukaryotes - 298 (source: NCBI BLink). & (gnl|cdd|36477 : 630.0) no description available & (q40588|aso_tobac : 231.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|87357 : 156.0) no description available & (reliability: 1772.0) & (original description: Putative IRX12, Description = Laccase-4, PFAM = PF00394;PF07731;PF07732)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf03327_1-4323' '(at2g30210 : 731.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 3 (LAC3); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: hypocotyl, fruit, root, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 13 (TAIR:AT5G07130.1); Has 11124 Blast hits to 9161 proteins in 1586 species: Archae - 42; Bacteria - 5039; Metazoa - 506; Fungi - 3547; Plants - 1577; Viruses - 0; Other Eukaryotes - 413 (source: NCBI BLink). & (gnl|cdd|36477 : 606.0) no description available & (p24792|aso_cucma : 223.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|87357 : 165.0) no description available & (reliability: 1462.0) & (original description: Putative LAC17, Description = Putative laccase-17, PFAM = PF07732;PF00394;PF07731)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf03500_251083-255102' '(at2g38080 : 772.0) Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype.; IRREGULAR XYLEM 12 (IRX12); FUNCTIONS IN: laccase activity; INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 10 (TAIR:AT5G01190.1); Has 9472 Blast hits to 8326 proteins in 1422 species: Archae - 45; Bacteria - 3703; Metazoa - 467; Fungi - 3359; Plants - 1600; Viruses - 0; Other Eukaryotes - 298 (source: NCBI BLink). & (gnl|cdd|36477 : 605.0) no description available & (p24792|aso_cucma : 204.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|87357 : 154.0) no description available & (reliability: 1544.0) & (original description: Putative lac2, Description = Laccase, PFAM = PF07731;PF07732;PF00394)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf03500_253052-255480' '(at2g38080 : 113.0) Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype.; IRREGULAR XYLEM 12 (IRX12); FUNCTIONS IN: laccase activity; INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 10 (TAIR:AT5G01190.1); Has 9472 Blast hits to 8326 proteins in 1422 species: Archae - 45; Bacteria - 3703; Metazoa - 467; Fungi - 3359; Plants - 1600; Viruses - 0; Other Eukaryotes - 298 (source: NCBI BLink). & (gnl|cdd|36477 : 90.0) no description available & (reliability: 226.0) & (original description: Putative LAC1, Description = Benzenediol:oxygen oxidoreductase, PFAM = PF07732)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf03786_158060-164069' '(at3g09220 : 741.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 7 (LAC7); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Laccase/Diphenol oxidase family protein (TAIR:AT5G01050.1); Has 10354 Blast hits to 8703 proteins in 1520 species: Archae - 53; Bacteria - 4205; Metazoa - 505; Fungi - 3603; Plants - 1597; Viruses - 0; Other Eukaryotes - 391 (source: NCBI BLink). & (gnl|cdd|36477 : 608.0) no description available & (p14133|aso_cucsa : 222.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 153.0) no description available & (reliability: 1482.0) & (original description: Putative LAC7, Description = Laccase-7, PFAM = PF07731;PF07732;PF00394)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf03860_532899-538084' '(at2g38080 : 891.0) Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype.; IRREGULAR XYLEM 12 (IRX12); FUNCTIONS IN: laccase activity; INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 10 (TAIR:AT5G01190.1); Has 9472 Blast hits to 8326 proteins in 1422 species: Archae - 45; Bacteria - 3703; Metazoa - 467; Fungi - 3359; Plants - 1600; Viruses - 0; Other Eukaryotes - 298 (source: NCBI BLink). & (gnl|cdd|36477 : 629.0) no description available & (p14133|aso_cucsa : 233.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 158.0) no description available & (reliability: 1782.0) & (original description: Putative LAC10, Description = Laccase-10, PFAM = PF07731;PF07732;PF00394)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf03966_45306-49333' '(at5g60020 : 857.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 17 (LAC17); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 2 (TAIR:AT2G29130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 573.0) no description available & (q40588|aso_tobac : 191.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|87357 : 162.0) no description available & (reliability: 1714.0) & (original description: Putative LAC17, Description = Laccase-17, PFAM = PF07731;PF07732;PF00394)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf06942_291522-295738' '(at2g30210 : 774.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 3 (LAC3); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: hypocotyl, fruit, root, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 13 (TAIR:AT5G07130.1); Has 11124 Blast hits to 9161 proteins in 1586 species: Archae - 42; Bacteria - 5039; Metazoa - 506; Fungi - 3547; Plants - 1577; Viruses - 0; Other Eukaryotes - 413 (source: NCBI BLink). & (gnl|cdd|36477 : 609.0) no description available & (p24792|aso_cucma : 227.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|87357 : 163.0) no description available & (reliability: 1548.0) & (original description: Putative LAC3, Description = Laccase-3, PFAM = PF07731;PF00394;PF07732)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf08294_553545-559544' '(at3g09220 : 680.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 7 (LAC7); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Laccase/Diphenol oxidase family protein (TAIR:AT5G01050.1); Has 10354 Blast hits to 8703 proteins in 1520 species: Archae - 53; Bacteria - 4205; Metazoa - 505; Fungi - 3603; Plants - 1597; Viruses - 0; Other Eukaryotes - 391 (source: NCBI BLink). & (gnl|cdd|36477 : 604.0) no description available & (p14133|aso_cucsa : 193.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 154.0) no description available & (reliability: 1360.0) & (original description: Putative LAC7, Description = Laccase-7, PFAM = PF07731;PF00394;PF07732)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf09649_648124-654804' '(at5g09360 : 635.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 14 (LAC14); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: central cell, fruit; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 12 (TAIR:AT5G05390.1); Has 9817 Blast hits to 8551 proteins in 1490 species: Archae - 32; Bacteria - 4030; Metazoa - 479; Fungi - 3363; Plants - 1557; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink). & (gnl|cdd|36477 : 546.0) no description available & (p14133|aso_cucsa : 214.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 143.0) no description available & (reliability: 1270.0) & (original description: Putative LAC14, Description = Laccase-14, PFAM = PF07732;PF07731;PF00394)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf09649_694665-699995' '(at5g09360 : 640.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 14 (LAC14); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: central cell, fruit; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 12 (TAIR:AT5G05390.1); Has 9817 Blast hits to 8551 proteins in 1490 species: Archae - 32; Bacteria - 4030; Metazoa - 479; Fungi - 3363; Plants - 1557; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink). & (gnl|cdd|36477 : 544.0) no description available & (p14133|aso_cucsa : 221.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 144.0) no description available & (reliability: 1280.0) & (original description: Putative TT10, Description = Laccase-15, PFAM = PF00394;PF07732;PF07731)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf09678_253332-259464' '(at2g38080 : 722.0) Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype.; IRREGULAR XYLEM 12 (IRX12); FUNCTIONS IN: laccase activity; INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 10 (TAIR:AT5G01190.1); Has 9472 Blast hits to 8326 proteins in 1422 species: Archae - 45; Bacteria - 3703; Metazoa - 467; Fungi - 3359; Plants - 1600; Viruses - 0; Other Eukaryotes - 298 (source: NCBI BLink). & (gnl|cdd|36477 : 602.0) no description available & (p24792|aso_cucma : 204.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|87357 : 157.0) no description available & (reliability: 1444.0) & (original description: Putative LAC22, Description = Laccase-22, PFAM = PF00394;PF07732;PF07731)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf10152_593949-598123' '(at5g05390 : 845.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 12 (LAC12); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 5 (TAIR:AT2G40370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 620.0) no description available & (p24792|aso_cucma : 219.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|87357 : 171.0) no description available & (reliability: 1690.0) & (original description: Putative LAC12, Description = Laccase-12, PFAM = PF07732;PF00394;PF07731)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf14877_124945-129400' '(at5g60020 : 863.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 17 (LAC17); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 2 (TAIR:AT2G29130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 584.0) no description available & (q40588|aso_tobac : 183.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|87357 : 163.0) no description available & (reliability: 1726.0) & (original description: Putative LAC17, Description = Laccase-17, PFAM = PF00394;PF07732;PF07731)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf14877_198503-204749' '(at5g60020 : 761.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 17 (LAC17); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 2 (TAIR:AT2G29130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 602.0) no description available & (q40588|aso_tobac : 209.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|87357 : 164.0) no description available & (reliability: 1522.0) & (original description: Putative LAC11, Description = Laccase-11, PFAM = PF00394;PF07731;PF07732)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf17701_174444-180032' '(at5g48100 : 600.0) Encodes a protein that is similar to laccase-like polyphenol oxidases. Involved in lignin and flavonoids biosynthesis. It has four conserved copper binding domains. Expressed in developing testa, where it colocalizes with the flavonoid end products proanthocyanidins and flavonols. Mutant plants exhibited a delay in developmentally determined browning of the testa, characterized by the pale brown color of seed coat. The tt10 mutant seeds accumulate more epicatechin monomers and more soluble proanthocyanidins than wild-type seeds. Flavonol composition was also affected in tt10 seeds, which exhibited a higher ratio of quercetin rhamnoside monomers versus dimers than wild-type seeds.; TRANSPARENT TESTA 10 (TT10); FUNCTIONS IN: copper ion binding, laccase activity; INVOLVED IN: lignin biosynthetic process, response to copper ion, flavonoid biosynthetic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 14 (TAIR:AT5G09360.1); Has 10402 Blast hits to 8649 proteins in 1516 species: Archae - 36; Bacteria - 4416; Metazoa - 511; Fungi - 3532; Plants - 1551; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink). & (gnl|cdd|36477 : 529.0) no description available & (p14133|aso_cucsa : 212.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 142.0) no description available & (reliability: 1200.0) & (original description: Putative LAC21, Description = Laccase-21, PFAM = PF07731;PF00394;PF07732)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf20493_30157-35520' '(at5g60020 : 752.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 17 (LAC17); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 2 (TAIR:AT2G29130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 579.0) no description available & (p14133|aso_cucsa : 187.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 154.0) no description available & (reliability: 1504.0) & (original description: Putative PGSC0003DMG401008903, Description = Laccase, PFAM = PF07732;PF00394;PF07731)' T '16.10' 'secondary metabolism.simple phenols' 'niben101scf20493_80496-85518' '(at5g60020 : 756.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 17 (LAC17); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 2 (TAIR:AT2G29130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 599.0) no description available & (p14133|aso_cucsa : 221.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (gnl|cdd|87357 : 165.0) no description available & (reliability: 1512.0) & (original description: Putative Lac3, Description = Laccase, PFAM = PF00394;PF07732;PF07731)' T '16.20' 'secondary metabolism.amino acid derivatives' '' '' '16.20.1001' 'secondary metabolism.amino acid derivatives' 'dopa' 'secondary metabolism, amino acid derivatives' M '16.20.1002' 'secondary metabolism.amino acid derivatives' 'dopamine' 'secondary metabolism, amino acid derivatives' M '16.20.1003' 'secondary metabolism.amino acid derivatives' 'noradrenaline' 'secondary metabolism, amino acid derivatives' M '16.20.1004' 'secondary metabolism.amino acid derivatives' 'tryptamine' 'secondary metabolism, shikimic acid pathway' M '16.20.1005' 'secondary metabolism.amino acid derivatives' 'tyramine' 'secondary metabolism, shikimic acid pathway' M '16.20.1006' 'secondary metabolism.amino acid derivatives' '3,4-dihydroxybenzylamine' 'Dopamine derivative' M '16.99' 'secondary metabolism.unspecified' 'niben101scf01204_95065-104671' '(at5g04620 : 630.0) The cDNA encoding 7-keto-8-aminopelargonic acid (KAPA) synthase, the first committed enzyme of the biotin synthesis pathway has been cloned and its molecular function confirmed (functional complementation of an E. coli mutant). The subcellular localization of the enzyme (cytosol) proves that the biotin biosynthesis in plants takes place in different compartments which differs from the biosynthetic route found in microorganisms.; biotin F (BIOF); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: long chain base2 (TAIR:AT5G23670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36573 : 422.0) no description available & (gnl|cdd|81801 : 335.0) no description available & (reliability: 1260.0) & (original description: Putative BIOF, Description = 8-amino-7-oxononanoate synthase, PFAM = PF00155)' T '16.99' 'secondary metabolism.unspecified' 'niben101scf03836_20026-30925' '(at5g04620 : 578.0) The cDNA encoding 7-keto-8-aminopelargonic acid (KAPA) synthase, the first committed enzyme of the biotin synthesis pathway has been cloned and its molecular function confirmed (functional complementation of an E. coli mutant). The subcellular localization of the enzyme (cytosol) proves that the biotin biosynthesis in plants takes place in different compartments which differs from the biosynthetic route found in microorganisms.; biotin F (BIOF); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: long chain base2 (TAIR:AT5G23670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36573 : 415.0) no description available & (gnl|cdd|30505 : 335.0) no description available & (reliability: 1156.0) & (original description: Putative BIOF, Description = 8-amino-7-oxononanoate synthase, PFAM = PF00155)' T '16.99' 'secondary metabolism.unspecified' 'niben101scf07493_416126-419484' '(at5g42830 : 500.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G07850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 241.0) no description available & (o24645|hcbt1_diaca : 97.4) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 952.0) & (original description: Putative AT3, Description = Anthocyanin 5-aromatic acyltransferase, PFAM = PF02458)' T '16.99' 'secondary metabolism.unspecified' 'niben101scf09840_39827-42801' '(at5g52810 : 379.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: structural constituent of eye lens, binding, catalytic activity; INVOLVED IN: arginine catabolic process to glutamate, nopaline catabolic process, metabolic process, octopine catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Ornithine cyclodeaminase/mu-crystallin (InterPro:IPR003462); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81857 : 325.0) no description available & (gnl|cdd|38217 : 311.0) no description available & (reliability: 758.0) & (original description: Putative ala1, Description = Alanine dehydrogenase, PFAM = PF02423)' T '16.99' 'secondary metabolism.unspecified' 'niben101scf17267_2622-7114' '(at5g67150 : 331.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G50280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 254.0) no description available & (o24645|hcbt1_diaca : 100.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 616.0) & (original description: Putative At3g50280, Description = Uncharacterized acetyltransferase At3g50280, PFAM = PF02458)' T '16.99.1001' 'secondary metabolism.unspecified' 'digitoxin' 'secondary metabolism' M '16.99.1003' 'secondary metabolism.unspecified' 'acetylsalicylate' 'secondary metabolism' M '16.99.1004' 'secondary metabolism.unspecified' '4-(methylamino)benzoate' 'secondary metabolism' M '16.99.1005' 'secondary metabolism.unspecified' '4-aminobenzoate' 'secondary metabolism' M '16.99.1006' 'secondary metabolism.unspecified' '3-phenylpropionate' 'secondary metabolism' M '16.99.1007' 'secondary metabolism.unspecified' '2-aminobenzoate' 'secondary metabolism' M '16.99.1008' 'secondary metabolism.unspecified' '1-o-benzyl-beta-glucoside' 'secondary metabolism' M '16.99.1009' 'secondary metabolism.unspecified' 'salicin' 'secondary metabolism' M '16.99.1010' 'secondary metabolism.unspecified' '3-(2,4-dihydoxyphenyl)propionate' 'secondary metabolism' M '16.99.1011' 'secondary metabolism.unspecified' '1-caffeoylquinate' 'secondary metabolism' M '16.99.1012' 'secondary metabolism.unspecified' 'buthylhydroxytoluene' 'secondary metabolism' M '16.99.1013' 'secondary metabolism.unspecified' 'mandelate' 'secondary metabolism' M '16.99.1014' 'secondary metabolism.unspecified' 'helicin' 'secondary metabolism, glucoside' M '16.99.1014' 'secondary metabolism.unspecified' 'quinate' 'secondary metabolism' M '16.99.1016' 'secondary metabolism.unspecified' 'acrylamide' 'Styrene degradation (to confirm in plants)' M '16.99.1017' 'secondary metabolism.unspecified' 'clotrimazole' 'secondary metabolism (?); Inhibitor of P450' M '16.99.1018' 'secondary metabolism.unspecified' 'propyl gallate' 'secondary metabolism, antioxydant' M '17' 'hormone metabolism' 'nbv0.3scaffold2273_28873-35419' '(at2g23610 : 229.0) Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on methyl salicylate, MeGA4, or MEGA9 in vitro.; methyl esterase 3 (MES3); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 4 (TAIR:AT2G23580.1); Has 1894 Blast hits to 1892 proteins in 428 species: Archae - 2; Bacteria - 1086; Metazoa - 0; Fungi - 17; Plants - 628; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (q40708|pir7a_orysa : 227.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 428.0) & (original description: Putative SABP2, Description = Salicylic acid-binding protein 2, PFAM = PF12697)' T '17' 'hormone metabolism' 'niben101scf03080_400376-403492' '(at3g50440 : 214.0) Encodes a protein shown to have methyl jasmonate esterase activity in vitro. This protein does not act on methyl IAA, MeSA, MeGA4, or MEGA9 in vitro.; methyl esterase 10 (MES10); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 1 (TAIR:AT2G23620.1); Has 1602 Blast hits to 1600 proteins in 360 species: Archae - 4; Bacteria - 838; Metazoa - 1; Fungi - 25; Plants - 612; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (q40708|pir7a_orysa : 202.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 388.0) & (original description: Putative SABP2, Description = Salicylic acid-binding protein 2, PFAM = PF12697)' T '17.1' 'hormone metabolism.abscisic acid' '' '' '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'nbv0.3scaffold37434_1899-6784' '(at5g42560 : 272.0) Abscisic acid-responsive (TB2/DP1, HVA22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22-like protein H (ATHVA22H) (TAIR:AT1G19950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36937 : 186.0) no description available & (reliability: 544.0) & (original description: Putative pco125364, Description = HVA22-like protein, PFAM = PF03134)' T '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'nbv0.3scaffold39340_14393-17913' '(at3g21760 : 387.0) Encodes HYR1, a UDP glycosyltransferase (UGT). HYR1 glucosylates hypostatin, an inhibitor of cell expansion in vivo to form a bioactive glucoside.; HYPOSTATIN RESISTANCE 1 (HYR1); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71B6 (TAIR:AT3G21780.1); Has 7489 Blast hits to 7432 proteins in 389 species: Archae - 0; Bacteria - 261; Metazoa - 2177; Fungi - 28; Plants - 4962; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 193.0) no description available & (p56725|zox_phavu : 152.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 85.4) no description available & (reliability: 706.0) & (original description: Putative GT6, Description = UDP-glucose flavonoid 3-O-glucosyltransferase 6, PFAM = PF00201)' T '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'nbv0.3scaffold57643_1350-5880' '(at3g21760 : 396.0) Encodes HYR1, a UDP glycosyltransferase (UGT). HYR1 glucosylates hypostatin, an inhibitor of cell expansion in vivo to form a bioactive glucoside.; HYPOSTATIN RESISTANCE 1 (HYR1); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71B6 (TAIR:AT3G21780.1); Has 7489 Blast hits to 7432 proteins in 389 species: Archae - 0; Bacteria - 261; Metazoa - 2177; Fungi - 28; Plants - 4962; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 183.0) no description available & (q43641|ufog_solme : 140.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|79510 : 90.4) no description available & (reliability: 732.0) & (original description: Putative UGT71E1, Description = UDP-glycosyltransferase 71E1, PFAM = PF00201)' T '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'nbv0.5scaffold3136_123378-150261' '(at1g04580 : 1533.0) Encodes aldehyde oxidase AAO4 preferentially expressed in developing seeds.; aldehyde oxidase 4 (AO4); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: abscisic aldehyde oxidase 3 (TAIR:AT2G27150.2); Has 17858 Blast hits to 17128 proteins in 1274 species: Archae - 410; Bacteria - 10596; Metazoa - 1017; Fungi - 119; Plants - 281; Viruses - 0; Other Eukaryotes - 5435 (source: NCBI BLink). & (gnl|cdd|35651 : 1406.0) no description available & (q6z351|aldol_orysa : 1399.0) Putative aldehyde oxidase-like protein - Oryza sativa (Rice) & (gnl|cdd|86083 : 516.0) no description available & (reliability: 3066.0) & (original description: Putative AAO4, Description = Benzaldehyde dehydrogenase (NAD(+)), PFAM = PF00111;PF01799;PF02738;PF00941;PF01315;PF03450)' T '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben044scf00014754ctg015_1-4683' '(at5g42560 : 273.0) Abscisic acid-responsive (TB2/DP1, HVA22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22-like protein H (ATHVA22H) (TAIR:AT1G19950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36937 : 189.0) no description available & (reliability: 546.0) & (original description: Putative PGSC0003DMG400029421, Description = HVA22-like protein, PFAM = PF03134)' T '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben044scf00016409ctg011_3353-6943' '(at1g16540 : 224.0) Encodes molybdenum cofactor sulfurase. Involved in Moco biosynthesis. Involved in the conversion of ABA-aldehyde to ABA, the last step of abscisic acid (ABA) biosynthesis. sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.N terminal domain is similar to bacterial NifS suggesting a common mechanism for sulphur mobilization and transfer. Also involved in protein import into chloroplasts.; ABA DEFICIENT 3 (ABA3); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), MOSC, N-terminal beta barrel (InterPro:IPR005303), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Molybdenum cofactor sulfurase, C-terminal (InterPro:IPR005302), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Molybdenum cofactor sulfurase family protein (TAIR:AT1G30910.1); Has 7940 Blast hits to 7904 proteins in 1914 species: Archae - 94; Bacteria - 5396; Metazoa - 390; Fungi - 394; Plants - 292; Viruses - 1; Other Eukaryotes - 1373 (source: NCBI BLink). & (q655r6|mocos_orysa : 218.0) Molybdenum cofactor sulfurase (EC 4.4.-.-) (MoCo sulfurase) (MOS) - Oryza sativa (Rice) & (gnl|cdd|37573 : 96.2) no description available & (gnl|cdd|33030 : 85.0) no description available & (reliability: 448.0) & (original description: Putative ABA3, Description = MoCo sulfurase, PFAM = PF03473)' T '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben044scf00016409ctg013_2773-6537' '(q655r6|mocos_orysa : 127.0) Molybdenum cofactor sulfurase (EC 4.4.-.-) (MoCo sulfurase) (MOS) - Oryza sativa (Rice) & (at1g16540 : 125.0) Encodes molybdenum cofactor sulfurase. Involved in Moco biosynthesis. Involved in the conversion of ABA-aldehyde to ABA, the last step of abscisic acid (ABA) biosynthesis. sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.N terminal domain is similar to bacterial NifS suggesting a common mechanism for sulphur mobilization and transfer. Also involved in protein import into chloroplasts.; ABA DEFICIENT 3 (ABA3); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), MOSC, N-terminal beta barrel (InterPro:IPR005303), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Molybdenum cofactor sulfurase, C-terminal (InterPro:IPR005302), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Molybdenum cofactor sulfurase family protein (TAIR:AT1G30910.1); Has 7940 Blast hits to 7904 proteins in 1914 species: Archae - 94; Bacteria - 5396; Metazoa - 390; Fungi - 394; Plants - 292; Viruses - 1; Other Eukaryotes - 1373 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative ABA3, Description = MoCo sulfurase, PFAM = PF03476)' T '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf00151_895588-905063' '(at2g27150 : 1563.0) Encodes the aldehyde oxidase delta isoform catalyzing the final step in abscisic acid biosynthesis.; abscisic aldehyde oxidase 3 (AAO3); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: aldehyde oxidase 4 (TAIR:AT1G04580.1); Has 18285 Blast hits to 17524 proteins in 1277 species: Archae - 409; Bacteria - 10745; Metazoa - 1018; Fungi - 113; Plants - 280; Viruses - 0; Other Eukaryotes - 5720 (source: NCBI BLink). & (q6z351|aldol_orysa : 1447.0) Putative aldehyde oxidase-like protein - Oryza sativa (Rice) & (gnl|cdd|35651 : 1443.0) no description available & (gnl|cdd|86083 : 563.0) no description available & (reliability: 3114.0) & (original description: Putative AAO4, Description = Benzaldehyde dehydrogenase (NAD(+)), PFAM = PF00111;PF02738;PF03450;PF01315;PF01799;PF00941)' T '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf00175_202952-206397' '(at4g15280 : 352.0) UDP-glucosyl transferase 71B5 (UGT71B5); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G15260.1); Has 7674 Blast hits to 7626 proteins in 477 species: Archae - 0; Bacteria - 573; Metazoa - 2069; Fungi - 31; Plants - 4920; Viruses - 24; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|36406 : 191.0) no description available & (p56725|zox_phavu : 152.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 84.6) no description available & (reliability: 644.0) & (original description: Putative GT6, Description = UDP-glucose flavonoid 3-O-glucosyltransferase 6, PFAM = PF00201)' T '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf00175_209120-212595' '(at3g21790 : 343.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71B8 (TAIR:AT3G21800.1); Has 7258 Blast hits to 7210 proteins in 387 species: Archae - 0; Bacteria - 256; Metazoa - 1953; Fungi - 26; Plants - 4958; Viruses - 11; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|36406 : 202.0) no description available & (p56725|zox_phavu : 146.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 83.1) no description available & (reliability: 664.0) & (original description: Putative UDPG7, Description = Glycosyltransferase, PFAM = PF00201)' T '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf00270_1487043-1491573' '(at3g21760 : 381.0) Encodes HYR1, a UDP glycosyltransferase (UGT). HYR1 glucosylates hypostatin, an inhibitor of cell expansion in vivo to form a bioactive glucoside.; HYPOSTATIN RESISTANCE 1 (HYR1); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71B6 (TAIR:AT3G21780.1); Has 7489 Blast hits to 7432 proteins in 389 species: Archae - 0; Bacteria - 261; Metazoa - 2177; Fungi - 28; Plants - 4962; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 171.0) no description available & (q43641|ufog_solme : 140.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|79510 : 90.0) no description available & (reliability: 702.0) & (original description: Putative UGT71E1, Description = UDP-glycosyltransferase 71E1, PFAM = PF00201)' T '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf00851_507815-519036' '(at1g04580 : 1540.0) Encodes aldehyde oxidase AAO4 preferentially expressed in developing seeds.; aldehyde oxidase 4 (AO4); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: abscisic aldehyde oxidase 3 (TAIR:AT2G27150.2); Has 17858 Blast hits to 17128 proteins in 1274 species: Archae - 410; Bacteria - 10596; Metazoa - 1017; Fungi - 119; Plants - 281; Viruses - 0; Other Eukaryotes - 5435 (source: NCBI BLink). & (gnl|cdd|35651 : 1446.0) no description available & (q852m2|aldo3_orysa : 1436.0) Probable aldehyde oxidase 3 (EC 1.2.3.1) (AO-3) - Oryza sativa (Rice) & (gnl|cdd|86083 : 562.0) no description available & (reliability: 3080.0) & (original description: Putative AAO4, Description = Benzaldehyde dehydrogenase (NAD(+)), PFAM = PF02738;PF01315;PF01799;PF00111;PF00941;PF03450)' T '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf00878_234021-243137' '(at2g44990 : 746.0) More Axillary Branching; carotenoid cleavage dioxygenases.; carotenoid cleavage dioxygenase 7 (CCD7); CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 6 (TAIR:AT3G24220.1); Has 211 Blast hits to 206 proteins in 62 species: Archae - 2; Bacteria - 69; Metazoa - 8; Fungi - 31; Plants - 96; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|36499 : 232.0) no description available & (gnl|cdd|33468 : 212.0) no description available & (reliability: 1492.0) & (original description: Putative CCD7, Description = Carotenoid cleavage dioxygenase 7, chloroplastic, PFAM = PF03055)' T '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf01372_170013-175403' '(at1g75700 : 106.0) HVA22-like protein G (HVA22G); CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22-like protein H (ATHVA22H) (TAIR:AT1G19950.1); Has 1473 Blast hits to 1473 proteins in 200 species: Archae - 0; Bacteria - 0; Metazoa - 703; Fungi - 189; Plants - 488; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|36937 : 85.0) no description available & (reliability: 212.0) & (original description: Putative pco125364, Description = HVA22-like protein, PFAM = PF03134)' T '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf01372_171265-176395' '(at5g42560 : 201.0) Abscisic acid-responsive (TB2/DP1, HVA22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22-like protein H (ATHVA22H) (TAIR:AT1G19950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36937 : 151.0) no description available & (reliability: 402.0) & (original description: Putative pco066358, Description = HVA22-like protein, PFAM = PF03134)' T '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf01611_699271-705246' '(at4g32810 : 720.0) Encodes a protein with similarity to carotenoid cleaving deoxygenases, the enzymes that cleave beta-carotene. Involved in the production of a graft transmissable signal to suppress axillary branching. Protein is localized to chloroplast stroma and expressed primarily in root tip. Mutants in the gene exhibit increased shoot branching, and light-dependent defects in hook opening and hypocotyl/root elongation. Only upregulated by auxin in the root and hypocotyl, and this is not required for the inhibition of shoot branching.; carotenoid cleavage dioxygenase 8 (CCD8); CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 6 (TAIR:AT3G24220.1); Has 2642 Blast hits to 2570 proteins in 479 species: Archae - 17; Bacteria - 769; Metazoa - 368; Fungi - 139; Plants - 827; Viruses - 0; Other Eukaryotes - 522 (source: NCBI BLink). & (gnl|cdd|36499 : 293.0) no description available & (gnl|cdd|33468 : 194.0) no description available & (reliability: 1440.0) & (original description: Putative CCD8B, Description = Carotenoid cleavage dioxygenase 8 homolog B, chloroplastic, PFAM = PF03055)' T '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf02390_211792-217052' '(at2g42820 : 190.0) HVA22-like protein F (HVA22F); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue A (TAIR:AT1G74520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36936 : 104.0) no description available & (q07764|hva22_horvu : 100.0) Protein HVA22 - Hordeum vulgare (Barley) & (gnl|cdd|86250 : 99.0) no description available & (reliability: 380.0) & (original description: Putative HVA22F, Description = HVA22-like protein f, PFAM = PF03134)' T '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf02437_186426-191041' '(at3g21750 : 416.0) Encodes a glucosyltransferase that can attach glucose to a number of hydroxylated phenolic compounds as well as quercetins in vitro; UDP-glucosyl transferase 71B1 (UGT71B1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G21760.1); Has 7577 Blast hits to 7528 proteins in 438 species: Archae - 0; Bacteria - 404; Metazoa - 2188; Fungi - 36; Plants - 4867; Viruses - 24; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|36406 : 210.0) no description available & (q43641|ufog_solme : 154.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|79510 : 83.5) no description available & (reliability: 798.0) & (original description: Putative GT6, Description = UDP-glucose flavonoid 3-O-glucosyltransferase 6, PFAM = PF00201)' T '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf02807_185533-188951' '(at1g07250 : 395.0) UDP-glucosyl transferase 71C4 (UGT71C4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71C3 (TAIR:AT1G07260.1); Has 7587 Blast hits to 7548 proteins in 444 species: Archae - 0; Bacteria - 410; Metazoa - 2119; Fungi - 25; Plants - 4933; Viruses - 39; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 183.0) no description available & (q6jah0|czog_sorbi : 154.0) Putative cis-zeatin O-glucosyltransferase (EC 2.4.1.215) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (gnl|cdd|79510 : 84.2) no description available & (reliability: 760.0) & (original description: Putative UGT71K1, Description = UDP-glycosyltransferase 71K1, PFAM = PF00201)' T '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf02807_320011-323549' '(at3g21760 : 454.0) Encodes HYR1, a UDP glycosyltransferase (UGT). HYR1 glucosylates hypostatin, an inhibitor of cell expansion in vivo to form a bioactive glucoside.; HYPOSTATIN RESISTANCE 1 (HYR1); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71B6 (TAIR:AT3G21780.1); Has 7489 Blast hits to 7432 proteins in 389 species: Archae - 0; Bacteria - 261; Metazoa - 2177; Fungi - 28; Plants - 4962; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 205.0) no description available & (p56725|zox_phavu : 162.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 95.4) no description available & (reliability: 844.0) & (original description: Putative UGT71E1, Description = UDP-glycosyltransferase 71E1, PFAM = PF00201)' T '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf03128_423699-427335' '(at5g42560 : 249.0) Abscisic acid-responsive (TB2/DP1, HVA22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22-like protein H (ATHVA22H) (TAIR:AT1G19950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36937 : 187.0) no description available & (gnl|cdd|86250 : 80.3) no description available & (reliability: 498.0) & (original description: Putative pco066358, Description = HVA22-like protein, PFAM = PF03134)' T '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf04754_158958-163608' '(at2g42820 : 190.0) HVA22-like protein F (HVA22F); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue A (TAIR:AT1G74520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36936 : 103.0) no description available & (q07764|hva22_horvu : 101.0) Protein HVA22 - Hordeum vulgare (Barley) & (gnl|cdd|86250 : 97.2) no description available & (reliability: 380.0) & (original description: Putative HVA22F, Description = HVA22-like protein f, PFAM = PF03134)' T '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf04940_123504-126946' '(at3g21800 : 332.0) UDP-glucosyl transferase 71B8 (UGT71B8); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, quercetin 4'-O-glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G21790.1); Has 7042 Blast hits to 6994 proteins in 367 species: Archae - 0; Bacteria - 212; Metazoa - 1805; Fungi - 25; Plants - 4944; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|36406 : 195.0) no description available & (p56725|zox_phavu : 148.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 85.4) no description available & (reliability: 630.0) & (original description: Putative UGT71A15, Description = UDP-glycosyltransferase 71A15, PFAM = PF00201)' T '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf05411_241059-244947' '(at5g42560 : 241.0) Abscisic acid-responsive (TB2/DP1, HVA22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22-like protein H (ATHVA22H) (TAIR:AT1G19950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36937 : 185.0) no description available & (reliability: 482.0) & (original description: Putative pco125364, Description = HVA22-like protein, PFAM = PF03134)' T '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf08020_96310-101242' '(at5g42560 : 219.0) Abscisic acid-responsive (TB2/DP1, HVA22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22-like protein H (ATHVA22H) (TAIR:AT1G19950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36937 : 161.0) no description available & (reliability: 438.0) & (original description: Putative pco125364, Description = HVA22-like protein, PFAM = PF03134)' T '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf08564_267242-303744' '(at1g16540 : 733.0) Encodes molybdenum cofactor sulfurase. Involved in Moco biosynthesis. Involved in the conversion of ABA-aldehyde to ABA, the last step of abscisic acid (ABA) biosynthesis. sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.N terminal domain is similar to bacterial NifS suggesting a common mechanism for sulphur mobilization and transfer. Also involved in protein import into chloroplasts.; ABA DEFICIENT 3 (ABA3); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), MOSC, N-terminal beta barrel (InterPro:IPR005303), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Molybdenum cofactor sulfurase, C-terminal (InterPro:IPR005302), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Molybdenum cofactor sulfurase family protein (TAIR:AT1G30910.1); Has 7940 Blast hits to 7904 proteins in 1914 species: Archae - 94; Bacteria - 5396; Metazoa - 390; Fungi - 394; Plants - 292; Viruses - 1; Other Eukaryotes - 1373 (source: NCBI BLink). & (q655r6|mocos_orysa : 600.0) Molybdenum cofactor sulfurase (EC 4.4.-.-) (MoCo sulfurase) (MOS) - Oryza sativa (Rice) & (gnl|cdd|37353 : 230.0) no description available & (gnl|cdd|30866 : 142.0) no description available & (reliability: 1466.0) & (original description: Putative ABA3, Description = MoCo sulfurase, PFAM = PF03473;PF03476;PF00266;PF00266)' T '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf08564_270193-274093' '(at1g16540 : 228.0) Encodes molybdenum cofactor sulfurase. Involved in Moco biosynthesis. Involved in the conversion of ABA-aldehyde to ABA, the last step of abscisic acid (ABA) biosynthesis. sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.N terminal domain is similar to bacterial NifS suggesting a common mechanism for sulphur mobilization and transfer. Also involved in protein import into chloroplasts.; ABA DEFICIENT 3 (ABA3); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), MOSC, N-terminal beta barrel (InterPro:IPR005303), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Molybdenum cofactor sulfurase, C-terminal (InterPro:IPR005302), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Molybdenum cofactor sulfurase family protein (TAIR:AT1G30910.1); Has 7940 Blast hits to 7904 proteins in 1914 species: Archae - 94; Bacteria - 5396; Metazoa - 390; Fungi - 394; Plants - 292; Viruses - 1; Other Eukaryotes - 1373 (source: NCBI BLink). & (q655r6|mocos_orysa : 223.0) Molybdenum cofactor sulfurase (EC 4.4.-.-) (MoCo sulfurase) (MOS) - Oryza sativa (Rice) & (gnl|cdd|37353 : 90.2) no description available & (reliability: 456.0) & (original description: Putative mal, Description = MCS, PFAM = PF00266)' T '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'niben101scf27706_9857-14240' '(at5g42560 : 243.0) Abscisic acid-responsive (TB2/DP1, HVA22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22-like protein H (ATHVA22H) (TAIR:AT1G19950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36937 : 180.0) no description available & (reliability: 486.0) & (original description: Putative pco125364, Description = HVA22-like protein, PFAM = PF03134)' T '17.1.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis' '' '' '17.1.1.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.zeaxanthin epoxidase' 'niben101scf01553_153896-162008' '(q40412|aba2_nicpl : 1247.0) Zeaxanthin epoxidase, chloroplast precursor (EC 1.14.13.90) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g67030 : 895.0) Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do.; ABA DEFICIENT 1 (ABA1); FUNCTIONS IN: zeaxanthin epoxidase activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zeaxanthin epoxidase (InterPro:IPR017079), Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT2G35660.1); Has 6741 Blast hits to 6737 proteins in 1083 species: Archae - 12; Bacteria - 3697; Metazoa - 0; Fungi - 1597; Plants - 576; Viruses - 0; Other Eukaryotes - 859 (source: NCBI BLink). & (gnl|cdd|37825 : 291.0) no description available & (gnl|cdd|75731 : 151.0) no description available & (reliability: 1790.0) & (original description: Putative ABA2, Description = Zeaxanthin epoxidase, chloroplastic, PFAM = PF00498;PF01494;PF01494)' T '17.1.1.1.10' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase' 'nbv0.3scaffold39805_6479-10239' '(at3g24220 : 689.0) A member of gene NCED-related gene family, encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene declines during the first 12h of imbibition.; nine-cis-epoxycarotenoid dioxygenase 6 (NCED6); CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 9 (TAIR:AT1G78390.1); Has 2907 Blast hits to 2870 proteins in 485 species: Archae - 16; Bacteria - 803; Metazoa - 275; Fungi - 199; Plants - 893; Viruses - 0; Other Eukaryotes - 721 (source: NCBI BLink). & (gnl|cdd|36499 : 510.0) no description available & (gnl|cdd|86222 : 502.0) no description available & (reliability: 1378.0) & (original description: Putative NCED6, Description = 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic, PFAM = PF03055)' T '17.1.1.1.10' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase' 'niben044scf00027368ctg008_22858-26301' '(at4g19170 : 477.0) chloroplast-targeted member of a family of enzymes similar to nine-cis-epoxycarotenoid dioxygenase; nine-cis-epoxycarotenoid dioxygenase 4 (NCED4); LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 5 (TAIR:AT1G30100.1); Has 2918 Blast hits to 2864 proteins in 491 species: Archae - 16; Bacteria - 796; Metazoa - 323; Fungi - 173; Plants - 887; Viruses - 0; Other Eukaryotes - 723 (source: NCBI BLink). & (gnl|cdd|86222 : 370.0) no description available & (gnl|cdd|36499 : 269.0) no description available & (reliability: 954.0) & (original description: Putative CCD4, Description = Carotenoid cleavage dioxygenase, PFAM = PF03055)' T '17.1.1.1.10' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase' 'niben101scf00897_19544-22491' '(at3g14440 : 475.0) Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. Regulated in response to drought and salinity. Expressed in roots, flowers and seeds. Localized to the chloroplast stroma and thylakoid membrane.; nine-cis-epoxycarotenoid dioxygenase 3 (NCED3); CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 9 (TAIR:AT1G78390.1); Has 2945 Blast hits to 2901 proteins in 493 species: Archae - 16; Bacteria - 796; Metazoa - 281; Fungi - 204; Plants - 893; Viruses - 0; Other Eukaryotes - 755 (source: NCBI BLink). & (gnl|cdd|86222 : 343.0) no description available & (gnl|cdd|36499 : 309.0) no description available & (reliability: 950.0) & (original description: Putative NCED, Description = 9-cis-epoxycarotenoid dioxygenase, PFAM = PF03055)' T '17.1.1.1.10' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase' 'niben101scf02301_232564-237786' '(at1g30100 : 840.0) Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene increases during the first 6h of imbibition.; nine-cis-epoxycarotenoid dioxygenase 5 (NCED5); CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 2 (TAIR:AT4G18350.1); Has 2882 Blast hits to 2845 proteins in 494 species: Archae - 16; Bacteria - 802; Metazoa - 232; Fungi - 202; Plants - 893; Viruses - 0; Other Eukaryotes - 737 (source: NCBI BLink). & (gnl|cdd|36499 : 574.0) no description available & (gnl|cdd|86222 : 565.0) no description available & (reliability: 1680.0) & (original description: Putative NCED1, Description = 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic, PFAM = PF03055)' T '17.1.1.1.10' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase' 'niben101scf02893_126243-130003' '(at3g24220 : 694.0) A member of gene NCED-related gene family, encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene declines during the first 12h of imbibition.; nine-cis-epoxycarotenoid dioxygenase 6 (NCED6); CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 9 (TAIR:AT1G78390.1); Has 2907 Blast hits to 2870 proteins in 485 species: Archae - 16; Bacteria - 803; Metazoa - 275; Fungi - 199; Plants - 893; Viruses - 0; Other Eukaryotes - 721 (source: NCBI BLink). & (gnl|cdd|36499 : 512.0) no description available & (gnl|cdd|86222 : 504.0) no description available & (reliability: 1388.0) & (original description: Putative NCED6, Description = 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic, PFAM = PF03055)' T '17.1.1.1.10' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase' 'niben101scf04174_652940-656778' '(at3g14440 : 840.0) Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. Regulated in response to drought and salinity. Expressed in roots, flowers and seeds. Localized to the chloroplast stroma and thylakoid membrane.; nine-cis-epoxycarotenoid dioxygenase 3 (NCED3); CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 9 (TAIR:AT1G78390.1); Has 2945 Blast hits to 2901 proteins in 493 species: Archae - 16; Bacteria - 796; Metazoa - 281; Fungi - 204; Plants - 893; Viruses - 0; Other Eukaryotes - 755 (source: NCBI BLink). & (gnl|cdd|36499 : 583.0) no description available & (gnl|cdd|86222 : 573.0) no description available & (reliability: 1680.0) & (original description: Putative NCED1, Description = 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic, PFAM = PF03055)' T '17.1.1.1.10' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase' 'niben101scf08613_195195-201078' '(at4g19170 : 719.0) chloroplast-targeted member of a family of enzymes similar to nine-cis-epoxycarotenoid dioxygenase; nine-cis-epoxycarotenoid dioxygenase 4 (NCED4); LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 5 (TAIR:AT1G30100.1); Has 2918 Blast hits to 2864 proteins in 491 species: Archae - 16; Bacteria - 796; Metazoa - 323; Fungi - 173; Plants - 887; Viruses - 0; Other Eukaryotes - 723 (source: NCBI BLink). & (gnl|cdd|86222 : 514.0) no description available & (gnl|cdd|36499 : 391.0) no description available & (reliability: 1438.0) & (original description: Putative ccd4, Description = Carotenoid cleavage dioxygenase 4, PFAM = PF03055)' T '17.1.1.1.10' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase' 'niben101scf08613_197621-201091' '(at4g19170 : 476.0) chloroplast-targeted member of a family of enzymes similar to nine-cis-epoxycarotenoid dioxygenase; nine-cis-epoxycarotenoid dioxygenase 4 (NCED4); LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 5 (TAIR:AT1G30100.1); Has 2918 Blast hits to 2864 proteins in 491 species: Archae - 16; Bacteria - 796; Metazoa - 323; Fungi - 173; Plants - 887; Viruses - 0; Other Eukaryotes - 723 (source: NCBI BLink). & (gnl|cdd|86222 : 366.0) no description available & (gnl|cdd|36499 : 261.0) no description available & (reliability: 952.0) & (original description: Putative CCD4, Description = Carotenoid cleavage dioxygenase, PFAM = PF03055)' T '17.1.1.1.11' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.short chain alcohol dehydrogenmase (ABA2)' 'nbv0.3scaffold7271_143-5771' '(at1g52340 : 381.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (p50160|ts2_maize : 216.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|35944 : 214.0) no description available & (gnl|cdd|81679 : 196.0) no description available & (reliability: 762.0) & (original description: Putative ABA2, Description = Xanthoxin dehydrogenase, PFAM = PF13561)' T '17.1.1.1.11' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.short chain alcohol dehydrogenmase (ABA2)' 'nbv0.5scaffold3692_139905-143344' '(at1g52340 : 233.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 211.0) no description available & (gnl|cdd|75407 : 196.0) no description available & (p50160|ts2_maize : 186.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 466.0) & (original description: Putative sadA, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T '17.1.1.1.11' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.short chain alcohol dehydrogenmase (ABA2)' 'niben044scf00000867ctg038_4021-7606' '(at1g52340 : 159.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 135.0) no description available & (p50160|ts2_maize : 124.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|81679 : 116.0) no description available & (reliability: 318.0) & (original description: Putative ABA2, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T '17.1.1.1.11' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.short chain alcohol dehydrogenmase (ABA2)' 'niben044scf00017652ctg011_4242-7825' '(at1g52340 : 211.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 187.0) no description available & (gnl|cdd|81825 : 166.0) no description available & (p50160|ts2_maize : 161.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 422.0) & (original description: Putative sadA, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T '17.1.1.1.11' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.short chain alcohol dehydrogenmase (ABA2)' 'niben101scf01440_257879-261040' '(at1g52340 : 237.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (p50160|ts2_maize : 211.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|35944 : 201.0) no description available & (gnl|cdd|82237 : 187.0) no description available & (reliability: 474.0) & (original description: Putative 8D10, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T '17.1.1.1.11' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.short chain alcohol dehydrogenmase (ABA2)' 'niben101scf01453_405014-409001' '(at1g52340 : 338.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 212.0) no description available & (p50160|ts2_maize : 199.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|81679 : 186.0) no description available & (reliability: 676.0) & (original description: Putative ABA2, Description = Xanthoxin dehydrogenase, PFAM = PF13561)' T '17.1.1.1.11' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.short chain alcohol dehydrogenmase (ABA2)' 'niben101scf04641_56278-59244' '(at1g52340 : 206.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 184.0) no description available & (p50160|ts2_maize : 162.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|81825 : 162.0) no description available & (reliability: 412.0) & (original description: Putative sadA, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T '17.1.1.1.11' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.short chain alcohol dehydrogenmase (ABA2)' 'niben101scf04641_141600-144793' '(at1g52340 : 211.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 189.0) no description available & (p50160|ts2_maize : 164.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|81825 : 162.0) no description available & (reliability: 422.0) & (original description: Putative sadA, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T '17.1.1.1.11' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.short chain alcohol dehydrogenmase (ABA2)' 'niben101scf08390_351606-355409' '(at1g52340 : 201.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 186.0) no description available & (gnl|cdd|82618 : 180.0) no description available & (p50160|ts2_maize : 178.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 402.0) & (original description: Putative 8D10, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T '17.1.1.1.11' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.short chain alcohol dehydrogenmase (ABA2)' 'niben101scf10396_271050-274406' '(at1g52340 : 228.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 213.0) no description available & (gnl|cdd|75407 : 197.0) no description available & (p50160|ts2_maize : 182.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 456.0) & (original description: Putative ABA2, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T '17.1.1.1.11' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.short chain alcohol dehydrogenmase (ABA2)' 'niben101scf14679_64392-67219' '(at1g52340 : 208.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 195.0) no description available & (p50160|ts2_maize : 185.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|81825 : 179.0) no description available & (reliability: 416.0) & (original description: Putative sadA, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T '17.1.1.1.11' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.short chain alcohol dehydrogenmase (ABA2)' 'niben101scf15760_5495-8656' '(at3g51680 : 235.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon, root; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26770.1); Has 119773 Blast hits to 119555 proteins in 3701 species: Archae - 1000; Bacteria - 77051; Metazoa - 6334; Fungi - 6742; Plants - 2947; Viruses - 5; Other Eukaryotes - 25694 (source: NCBI BLink). & (p50160|ts2_maize : 206.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|35944 : 198.0) no description available & (gnl|cdd|82237 : 188.0) no description available & (reliability: 468.0) & (original description: Putative 8D10, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T '17.1.1.1.12' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.abscisic aldehyde oxidase' 'nbv0.5scaffold3136_123378-150261' '(at1g04580 : 1533.0) Encodes aldehyde oxidase AAO4 preferentially expressed in developing seeds.; aldehyde oxidase 4 (AO4); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: abscisic aldehyde oxidase 3 (TAIR:AT2G27150.2); Has 17858 Blast hits to 17128 proteins in 1274 species: Archae - 410; Bacteria - 10596; Metazoa - 1017; Fungi - 119; Plants - 281; Viruses - 0; Other Eukaryotes - 5435 (source: NCBI BLink). & (gnl|cdd|35651 : 1406.0) no description available & (q6z351|aldol_orysa : 1399.0) Putative aldehyde oxidase-like protein - Oryza sativa (Rice) & (gnl|cdd|86083 : 516.0) no description available & (reliability: 3034.0) & (original description: Putative AAO4, Description = Benzaldehyde dehydrogenase (NAD(+)), PFAM = PF00111;PF01799;PF02738;PF00941;PF01315;PF03450)' T '17.1.1.1.12' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.abscisic aldehyde oxidase' 'niben101scf00151_895588-905063' '(at2g27150 : 1563.0) Encodes the aldehyde oxidase delta isoform catalyzing the final step in abscisic acid biosynthesis.; abscisic aldehyde oxidase 3 (AAO3); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: aldehyde oxidase 4 (TAIR:AT1G04580.1); Has 18285 Blast hits to 17524 proteins in 1277 species: Archae - 409; Bacteria - 10745; Metazoa - 1018; Fungi - 113; Plants - 280; Viruses - 0; Other Eukaryotes - 5720 (source: NCBI BLink). & (q6z351|aldol_orysa : 1447.0) Putative aldehyde oxidase-like protein - Oryza sativa (Rice) & (gnl|cdd|35651 : 1443.0) no description available & (gnl|cdd|86083 : 563.0) no description available & (reliability: 3126.0) & (original description: Putative AAO4, Description = Benzaldehyde dehydrogenase (NAD(+)), PFAM = PF00111;PF02738;PF03450;PF01315;PF01799;PF00941)' T '17.1.1.1.12' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.abscisic aldehyde oxidase' 'niben101scf00851_507815-519036' '(at1g04580 : 1540.0) Encodes aldehyde oxidase AAO4 preferentially expressed in developing seeds.; aldehyde oxidase 4 (AO4); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: abscisic aldehyde oxidase 3 (TAIR:AT2G27150.2); Has 17858 Blast hits to 17128 proteins in 1274 species: Archae - 410; Bacteria - 10596; Metazoa - 1017; Fungi - 119; Plants - 281; Viruses - 0; Other Eukaryotes - 5435 (source: NCBI BLink). & (gnl|cdd|35651 : 1446.0) no description available & (q852m2|aldo3_orysa : 1436.0) Probable aldehyde oxidase 3 (EC 1.2.3.1) (AO-3) - Oryza sativa (Rice) & (gnl|cdd|86083 : 562.0) no description available & (reliability: 3066.0) & (original description: Putative AAO4, Description = Benzaldehyde dehydrogenase (NAD(+)), PFAM = PF02738;PF01315;PF01799;PF00111;PF00941;PF03450)' T '17.1.1.2' 'hormone metabolism.abscisic acid.synthesis-degradation.degradation' '' '' '17.1.1.2.1' 'hormone metabolism.abscisic acid.synthesis-degradation.degradation.8-hydroxylase' 'nbv0.3scaffold7643_107-4576' '(at1g19630 : 291.0) member of CYP722A; "cytochrome P450, family 722, subfamily A, polypeptide 1" (CYP722A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 1 (TAIR:AT4G19230.1); Has 35375 Blast hits to 35292 proteins in 1804 species: Archae - 63; Bacteria - 6821; Metazoa - 11890; Fungi - 5888; Plants - 8751; Viruses - 3; Other Eukaryotes - 1959 (source: NCBI BLink). & (gnl|cdd|35379 : 269.0) no description available & (gnl|cdd|84486 : 221.0) no description available & (q9axh9|kao1_horvu : 207.0) Ent-kaurenoic acid oxidase 1 (EC 1.14.13.79) (gpr5) - Hordeum vulgare (Barley) & (reliability: 548.0) & (original description: Putative CYP707A, Description = Abscisic acid 8-hydroxylase 3, PFAM = PF00067)' T '17.1.1.2.1' 'hormone metabolism.abscisic acid.synthesis-degradation.degradation.8-hydroxylase' 'niben044scf00026213ctg008_373-10949' '(at4g19230 : 750.0) Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy.; "cytochrome P450, family 707, subfamily A, polypeptide 1" (CYP707A1); FUNCTIONS IN: oxygen binding, (+)-abscisic acid 8'-hydroxylase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 3 (TAIR:AT5G45340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35379 : 297.0) no description available & (q8gsq1|c85a1_orysa : 264.0) Cytochrome P450 85A1 (EC 1.14.-.-) (C6-oxidase) (OsDWARF) (Dwarf protein) - Oryza sativa (Rice) & (gnl|cdd|84486 : 222.0) no description available & (reliability: 1500.0) & (original description: Putative CYP707A1, Description = Abscisic acid 8'-hydroxylase 1, PFAM = PF00067)' T '17.1.1.2.1' 'hormone metabolism.abscisic acid.synthesis-degradation.degradation.8-hydroxylase' 'niben101scf07288_919811-924250' '(at4g19230 : 754.0) Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy.; "cytochrome P450, family 707, subfamily A, polypeptide 1" (CYP707A1); FUNCTIONS IN: oxygen binding, (+)-abscisic acid 8'-hydroxylase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 3 (TAIR:AT5G45340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35379 : 283.0) no description available & (q8gsq1|c85a1_orysa : 258.0) Cytochrome P450 85A1 (EC 1.14.-.-) (C6-oxidase) (OsDWARF) (Dwarf protein) - Oryza sativa (Rice) & (gnl|cdd|84486 : 219.0) no description available & (reliability: 1508.0) & (original description: Putative CYP707A1, Description = Abscisic acid 8'-hydroxylase 1, PFAM = PF00067)' T '17.1.1.2.1' 'hormone metabolism.abscisic acid.synthesis-degradation.degradation.8-hydroxylase' 'niben101scf10415_1664-22200' '(at4g19230 : 741.0) Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy.; "cytochrome P450, family 707, subfamily A, polypeptide 1" (CYP707A1); FUNCTIONS IN: oxygen binding, (+)-abscisic acid 8'-hydroxylase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 3 (TAIR:AT5G45340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35379 : 297.0) no description available & (q8gsq1|c85a1_orysa : 264.0) Cytochrome P450 85A1 (EC 1.14.-.-) (C6-oxidase) (OsDWARF) (Dwarf protein) - Oryza sativa (Rice) & (gnl|cdd|84486 : 224.0) no description available & (reliability: 1482.0) & (original description: Putative CYP707A1, Description = Abscisic acid 8'-hydroxylase 1, PFAM = PF00067)' T '17.1.1.1001' 'hormone metabolism.abscisic acid.synthesis-degradation' 'mevalonolactone' 'hormone metabolism.abscisic acid precursor' M '17.1.1.1002' 'hormone metabolism.abscisic acid.synthesis-degradation' 'aba' 'hormone metabolism.abscisic acid' M '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'nbv0.3scaffold39620_1-4455' '(at4g32010 : 132.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative HSI2, Description = AP2/B3 transcription factor family protein, PFAM = PF07496)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'nbv0.5scaffold1693_26584-34908' '(at3g24650 : 375.0) Homologous to the maize transcription factor Viviparous-1. Full length ABI3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of ABI3 requires the B3 DNA-binding domain and an activation domain. In addition to the known N-terminal-located activation domain, a second transcription activation domain was found in the B1 region of ABI3. ABI3 is essential for seed maturation. Regulator of the transition between embryo maturation and early seedling development. Putative seed-specific transcriptional activator. Mutants exhibit decreased responsiveness to ABA suggesting that ABI3 protein participates in the ABA perception/transduction cascade. Based on double mutant analyses, ABI3 interacts genetically with both FUS3 and LEC1 and is involved in controlling accumulation of chlorophyll and anthocyanins, sensitivity to abscisic acid, and expression of the members of the 12S storage protein gene family. In addition, both FUS3 and LEC1 regulate positively the abundance of the ABI3 protein in the seed. Alternative splicing of ABI3 is developmentally regulated by SUA (AT3G54230).; ABA INSENSITIVE 3 (ABI3); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G26790.1); Has 4494 Blast hits to 2758 proteins in 300 species: Archae - 0; Bacteria - 132; Metazoa - 1104; Fungi - 405; Plants - 1155; Viruses - 101; Other Eukaryotes - 1597 (source: NCBI BLink). & (p26307|viv1_maize : 283.0) Regulatory protein viviparous-1 - Zea mays (Maize) & (gnl|cdd|85971 : 84.3) no description available & (reliability: 750.0) & (original description: Putative wbABI3, Description = ABI-3 homolog, PFAM = PF02362)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'nbv0.5scaffold2293_206800-212174' '(at3g24650 : 339.0) Homologous to the maize transcription factor Viviparous-1. Full length ABI3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of ABI3 requires the B3 DNA-binding domain and an activation domain. In addition to the known N-terminal-located activation domain, a second transcription activation domain was found in the B1 region of ABI3. ABI3 is essential for seed maturation. Regulator of the transition between embryo maturation and early seedling development. Putative seed-specific transcriptional activator. Mutants exhibit decreased responsiveness to ABA suggesting that ABI3 protein participates in the ABA perception/transduction cascade. Based on double mutant analyses, ABI3 interacts genetically with both FUS3 and LEC1 and is involved in controlling accumulation of chlorophyll and anthocyanins, sensitivity to abscisic acid, and expression of the members of the 12S storage protein gene family. In addition, both FUS3 and LEC1 regulate positively the abundance of the ABI3 protein in the seed. Alternative splicing of ABI3 is developmentally regulated by SUA (AT3G54230).; ABA INSENSITIVE 3 (ABI3); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G26790.1); Has 4494 Blast hits to 2758 proteins in 300 species: Archae - 0; Bacteria - 132; Metazoa - 1104; Fungi - 405; Plants - 1155; Viruses - 101; Other Eukaryotes - 1597 (source: NCBI BLink). & (p26307|viv1_maize : 291.0) Regulatory protein viviparous-1 - Zea mays (Maize) & (gnl|cdd|85971 : 85.5) no description available & (reliability: 678.0) & (original description: Putative abi3, Description = Putative ABI3 homolog, PFAM = PF02362)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'nbv0.5scaffold3943_171426-175707' '(at4g34000 : 218.0) Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.; abscisic acid responsive elements-binding factor 3 (ABF3); FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.2); Has 1814 Blast hits to 1660 proteins in 150 species: Archae - 0; Bacteria - 4; Metazoa - 247; Fungi - 25; Plants - 1446; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative ABF3, Description = ABSCISIC ACID-INSENSITIVE 5-like protein 6, PFAM = PF00170)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben044scf00004410ctg013_1492-9731' '(at4g32010 : 331.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 650.0) & (original description: Putative HSI2, Description = AP2/B3 transcription factor family protein, PFAM = PF02362)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben044scf00005089ctg000_22192-27518' '(at3g24650 : 369.0) Homologous to the maize transcription factor Viviparous-1. Full length ABI3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of ABI3 requires the B3 DNA-binding domain and an activation domain. In addition to the known N-terminal-located activation domain, a second transcription activation domain was found in the B1 region of ABI3. ABI3 is essential for seed maturation. Regulator of the transition between embryo maturation and early seedling development. Putative seed-specific transcriptional activator. Mutants exhibit decreased responsiveness to ABA suggesting that ABI3 protein participates in the ABA perception/transduction cascade. Based on double mutant analyses, ABI3 interacts genetically with both FUS3 and LEC1 and is involved in controlling accumulation of chlorophyll and anthocyanins, sensitivity to abscisic acid, and expression of the members of the 12S storage protein gene family. In addition, both FUS3 and LEC1 regulate positively the abundance of the ABI3 protein in the seed. Alternative splicing of ABI3 is developmentally regulated by SUA (AT3G54230).; ABA INSENSITIVE 3 (ABI3); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G26790.1); Has 4494 Blast hits to 2758 proteins in 300 species: Archae - 0; Bacteria - 132; Metazoa - 1104; Fungi - 405; Plants - 1155; Viruses - 101; Other Eukaryotes - 1597 (source: NCBI BLink). & (p26307|viv1_maize : 269.0) Regulatory protein viviparous-1 - Zea mays (Maize) & (gnl|cdd|85971 : 84.7) no description available & (reliability: 738.0) & (original description: Putative ABI3, Description = B3 domain-containing transcription factor ABI3, PFAM = PF02362)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben044scf00008902ctg002_849-5461' '(at4g32010 : 130.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative HSI2, Description = AP2/B3 transcription factor family protein, PFAM = PF07496)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben044scf00016397ctg002_42288-50107' '(at1g72770 : 454.0) mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2C; regulates the activation of the Snf1-related kinase OST1 by abscisic acid.; homology to ABI1 (HAB1); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: homology to ABI2 (TAIR:AT1G17550.1). & (gnl|cdd|35917 : 248.0) no description available & (gnl|cdd|29062 : 237.0) no description available & (reliability: 858.0) & (original description: Putative abi1B, Description = Protein phosphatase 2C 16, PFAM = PF00481)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben044scf00022704ctg004_1896-13392' '(at3g08550 : 694.0) mutant is Dwarfed and shows defects in cell elongation; Cellulose deficient; Plasma Membrane Protein; KOBITO (KOB1); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57200.1); Has 94 Blast hits to 94 proteins in 32 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 1388.0) & (original description: Putative ELD1, Description = Glycosyltransferase-like KOBITO 1, PFAM = )' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben044scf00034204ctg022_6018-9812' '(at4g34000 : 215.0) Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.; abscisic acid responsive elements-binding factor 3 (ABF3); FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.2); Has 1814 Blast hits to 1660 proteins in 150 species: Archae - 0; Bacteria - 4; Metazoa - 247; Fungi - 25; Plants - 1446; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 430.0) & (original description: Putative ABF2, Description = ABSCISIC ACID-INSENSITIVE 5-like protein 5, PFAM = PF00170)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben044scf00035041ctg002_9161-13348' '(at4g34000 : 246.0) Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.; abscisic acid responsive elements-binding factor 3 (ABF3); FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.2); Has 1814 Blast hits to 1660 proteins in 150 species: Archae - 0; Bacteria - 4; Metazoa - 247; Fungi - 25; Plants - 1446; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative ABF3, Description = ABSCISIC ACID-INSENSITIVE 5-like protein 6, PFAM = PF00170)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben044scf00035571ctg007_11517-15729' '(at2g30470 : 131.0) HSI2 is a member of a novel family of B3 domain proteins with a sequence similar to the ERF-associated amphiphilic repression (EAR) motif. It functions as an active repressor of the Spo minimal promoter (derived from a gene for sweet potato sporamin A1) through the EAR motif. It contains a plant-specific B3 DNA-binding domain. The Arabidopsis genome contains 42 genes with B3 domains which could be classified into three families that are represented by ABI3, ARF1 and RAV1. HSI2 belongs to the ABI3 family. It is expressed at similar levels in all organs. Treatment with 6% sucrose showed a slight increase in transcript levels after 24 h. No changes were observed after treatment with 50µM ABA. It is localized in the nucleus via a nuclear localization sequence located in the fourth conserved region of the C-terminal B3 domain.; high-level expression of sugar-inducible gene 2 (HSI2); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: HSI2-like 1 (TAIR:AT4G32010.1); Has 1263 Blast hits to 1242 proteins in 97 species: Archae - 0; Bacteria - 5; Metazoa - 31; Fungi - 0; Plants - 1168; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative HSI2, Description = AP2/B3 transcription factor family protein, PFAM = )' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben044scf00038103ctg008_4087-8775' '(at5g57050 : 393.0) Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo.; ABA INSENSITIVE 2 (ABI2); CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G26080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35917 : 244.0) no description available & (gnl|cdd|47660 : 230.0) no description available & (reliability: 786.0) & (original description: Putative ABI2, Description = Protein phosphatase 2C 77, PFAM = PF00481)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf00107_26794-31471' '(at4g34000 : 197.0) Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.; abscisic acid responsive elements-binding factor 3 (ABF3); FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.2); Has 1814 Blast hits to 1660 proteins in 150 species: Archae - 0; Bacteria - 4; Metazoa - 247; Fungi - 25; Plants - 1446; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative bZIP, Description = ABSCISIC ACID-INSENSITIVE 5-like protein 2, PFAM = PF00170)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf00530_1047619-1057309' '(at3g11410 : 251.0) Encodes protein phosphatase 2C. Negative regulator of ABA signalling. Expressed in seeds during germination. mRNA up-regulated by drought and ABA.; protein phosphatase 2CA (PP2CA); FUNCTIONS IN: protein binding, protein serine/threonine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 6 processes; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 2 (TAIR:AT1G07430.1); Has 6894 Blast hits to 6854 proteins in 510 species: Archae - 4; Bacteria - 413; Metazoa - 1689; Fungi - 773; Plants - 2747; Viruses - 7; Other Eukaryotes - 1261 (source: NCBI BLink). & (gnl|cdd|29062 : 242.0) no description available & (gnl|cdd|35917 : 235.0) no description available & (reliability: 464.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf00530_1047625-1057258' '(at3g11410 : 236.0) Encodes protein phosphatase 2C. Negative regulator of ABA signalling. Expressed in seeds during germination. mRNA up-regulated by drought and ABA.; protein phosphatase 2CA (PP2CA); FUNCTIONS IN: protein binding, protein serine/threonine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 6 processes; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 2 (TAIR:AT1G07430.1); Has 6894 Blast hits to 6854 proteins in 510 species: Archae - 4; Bacteria - 413; Metazoa - 1689; Fungi - 773; Plants - 2747; Viruses - 7; Other Eukaryotes - 1261 (source: NCBI BLink). & (gnl|cdd|29062 : 234.0) no description available & (gnl|cdd|35917 : 229.0) no description available & (reliability: 436.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf00611_819141-824598' '(at5g57050 : 390.0) Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo.; ABA INSENSITIVE 2 (ABI2); CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G26080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35917 : 239.0) no description available & (gnl|cdd|47660 : 225.0) no description available & (reliability: 780.0) & (original description: Putative ABI2, Description = Protein phosphatase 2C 77, PFAM = PF00481)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf00640_504553-510241' '(at2g20770 : 530.0) Encodes a protein with reported similarity to GCR2 a putative G protein coupled receptor thought to be an ABA receptor.GCL2 also has similarity to LANCL1 and LANCL2, human homologs of bacterial lanthionine synthetase.; GCR2-like 2 (GCL2); FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: extrinsic to membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: LanC-like protein, eukaryotic (InterPro:IPR020464), Six-hairpin glycosidase-like (InterPro:IPR008928), Lanthionine synthetase C-like (InterPro:IPR007822); BEST Arabidopsis thaliana protein match is: G protein coupled receptor (TAIR:AT1G52920.1); Has 689 Blast hits to 684 proteins in 212 species: Archae - 0; Bacteria - 201; Metazoa - 271; Fungi - 68; Plants - 112; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|37998 : 454.0) no description available & (gnl|cdd|86797 : 263.0) no description available & (reliability: 958.0) & (original description: Putative GCL2, Description = LanC-like protein GCL2, PFAM = PF05147)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf02482_304565-313674' '(at4g32010 : 333.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 658.0) & (original description: Putative HSI2, Description = AP2/B3 transcription factor family protein, PFAM = PF02362)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf03256_140710-163536' '(at2g30470 : 658.0) HSI2 is a member of a novel family of B3 domain proteins with a sequence similar to the ERF-associated amphiphilic repression (EAR) motif. It functions as an active repressor of the Spo minimal promoter (derived from a gene for sweet potato sporamin A1) through the EAR motif. It contains a plant-specific B3 DNA-binding domain. The Arabidopsis genome contains 42 genes with B3 domains which could be classified into three families that are represented by ABI3, ARF1 and RAV1. HSI2 belongs to the ABI3 family. It is expressed at similar levels in all organs. Treatment with 6% sucrose showed a slight increase in transcript levels after 24 h. No changes were observed after treatment with 50µM ABA. It is localized in the nucleus via a nuclear localization sequence located in the fourth conserved region of the C-terminal B3 domain.; high-level expression of sugar-inducible gene 2 (HSI2); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: HSI2-like 1 (TAIR:AT4G32010.1); Has 1263 Blast hits to 1242 proteins in 97 species: Archae - 0; Bacteria - 5; Metazoa - 31; Fungi - 0; Plants - 1168; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|85971 : 87.0) no description available & (p37398|viv_orysa : 83.6) Protein viviparous homolog - Oryza sativa (Rice) & (reliability: 1316.0) & (original description: Putative Os07g0679700, Description = B3 domain-containing protein Os07g0679700, PFAM = PF02362;PF07496)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf03584_285143-290268' '(at1g72770 : 472.0) mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2C; regulates the activation of the Snf1-related kinase OST1 by abscisic acid.; homology to ABI1 (HAB1); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: homology to ABI2 (TAIR:AT1G17550.1). & (gnl|cdd|35917 : 252.0) no description available & (gnl|cdd|47660 : 239.0) no description available & (reliability: 864.0) & (original description: Putative HAB1, Description = Protein phosphatase 2C 16, PFAM = PF00481)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf04040_630300-642579' '(at1g72770 : 458.0) mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2C; regulates the activation of the Snf1-related kinase OST1 by abscisic acid.; homology to ABI1 (HAB1); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: homology to ABI2 (TAIR:AT1G17550.1). & (gnl|cdd|35917 : 250.0) no description available & (gnl|cdd|29062 : 237.0) no description available & (reliability: 862.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C 16, PFAM = PF00481)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf04552_202854-208373' '(at5g20910 : 305.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G15820.1); Has 9587 Blast hits to 9565 proteins in 281 species: Archae - 0; Bacteria - 0; Metazoa - 2561; Fungi - 845; Plants - 4808; Viruses - 65; Other Eukaryotes - 1308 (source: NCBI BLink). & (reliability: 610.0) & (original description: Putative AIP2, Description = E3 ubiquitin-protein ligase AIP2, PFAM = PF13639)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf05756_81894-86349' '(at5g57050 : 392.0) Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo.; ABA INSENSITIVE 2 (ABI2); CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G26080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35917 : 237.0) no description available & (gnl|cdd|47660 : 226.0) no description available & (reliability: 784.0) & (original description: Putative ABI2, Description = Protein phosphatase 2C 77, PFAM = PF00481)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf06222_218736-236790' '(at2g30470 : 436.0) HSI2 is a member of a novel family of B3 domain proteins with a sequence similar to the ERF-associated amphiphilic repression (EAR) motif. It functions as an active repressor of the Spo minimal promoter (derived from a gene for sweet potato sporamin A1) through the EAR motif. It contains a plant-specific B3 DNA-binding domain. The Arabidopsis genome contains 42 genes with B3 domains which could be classified into three families that are represented by ABI3, ARF1 and RAV1. HSI2 belongs to the ABI3 family. It is expressed at similar levels in all organs. Treatment with 6% sucrose showed a slight increase in transcript levels after 24 h. No changes were observed after treatment with 50µM ABA. It is localized in the nucleus via a nuclear localization sequence located in the fourth conserved region of the C-terminal B3 domain.; high-level expression of sugar-inducible gene 2 (HSI2); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: HSI2-like 1 (TAIR:AT4G32010.1); Has 1263 Blast hits to 1242 proteins in 97 species: Archae - 0; Bacteria - 5; Metazoa - 31; Fungi - 0; Plants - 1168; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|85971 : 85.5) no description available & (reliability: 872.0) & (original description: Putative Os07g0563300, Description = B3 domain-containing protein Os07g0563300, PFAM = PF07496;PF02362)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf07007_379401-391086' '(at1g52920 : 334.0) Encodes a plasma membraneñlocalized ABA receptor, which interacts with the Gαβγ complex. It has been postulated that the binding of ABA to GCR2 results in the release of the G protein and dissociation of the heterotrimeric complex into Gα and the Gβγ dimer to activate downstream ABA effectors and to trigger the ABA responses.; G protein coupled receptor (GPCR); CONTAINS InterPro DOMAIN/s: LanC-like protein, eukaryotic (InterPro:IPR020464), Six-hairpin glycosidase-like (InterPro:IPR008928), Lanthionine synthetase C-like (InterPro:IPR007822); BEST Arabidopsis thaliana protein match is: GCR2-like 2 (TAIR:AT2G20770.1); Has 681 Blast hits to 670 proteins in 211 species: Archae - 0; Bacteria - 184; Metazoa - 280; Fungi - 66; Plants - 112; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|37998 : 328.0) no description available & (gnl|cdd|86797 : 169.0) no description available & (reliability: 668.0) & (original description: Putative GCL1, Description = G protein coupled receptor, PFAM = PF05147)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf07007_408162-413137' '(at1g52920 : 542.0) Encodes a plasma membraneñlocalized ABA receptor, which interacts with the Gαβγ complex. It has been postulated that the binding of ABA to GCR2 results in the release of the G protein and dissociation of the heterotrimeric complex into Gα and the Gβγ dimer to activate downstream ABA effectors and to trigger the ABA responses.; G protein coupled receptor (GPCR); CONTAINS InterPro DOMAIN/s: LanC-like protein, eukaryotic (InterPro:IPR020464), Six-hairpin glycosidase-like (InterPro:IPR008928), Lanthionine synthetase C-like (InterPro:IPR007822); BEST Arabidopsis thaliana protein match is: GCR2-like 2 (TAIR:AT2G20770.1); Has 681 Blast hits to 670 proteins in 211 species: Archae - 0; Bacteria - 184; Metazoa - 280; Fungi - 66; Plants - 112; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|37998 : 491.0) no description available & (gnl|cdd|86797 : 303.0) no description available & (reliability: 1084.0) & (original description: Putative GCR2, Description = LanC-like protein GCR2, PFAM = PF05147)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf07278_31158-34952' '(at4g34000 : 194.0) Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.; abscisic acid responsive elements-binding factor 3 (ABF3); FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.2); Has 1814 Blast hits to 1660 proteins in 150 species: Archae - 0; Bacteria - 4; Metazoa - 247; Fungi - 25; Plants - 1446; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative ABF2, Description = ABSCISIC ACID-INSENSITIVE 5-like protein 5, PFAM = PF00170)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf07951_321495-330147' '(at4g32010 : 652.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|85971 : 80.5) no description available & (reliability: 1192.0) & (original description: Putative VAL1, Description = B3 domain-containing transcription repressor VAL1, PFAM = PF07496;PF02362)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf07951_322083-335047' '(at4g32010 : 652.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|85971 : 80.5) no description available & (reliability: 1186.0) & (original description: Putative Os07g0679700, Description = B3 domain-containing protein Os07g0679700, PFAM = PF07496;PF02362)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf08918_72260-89034' '(at3g08550 : 708.0) mutant is Dwarfed and shows defects in cell elongation; Cellulose deficient; Plasma Membrane Protein; KOBITO (KOB1); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57200.1); Has 94 Blast hits to 94 proteins in 32 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 1416.0) & (original description: Putative ELD1, Description = Glycosyltransferase-like KOBITO 1, PFAM = )' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf09130_521393-526061' '(at1g72770 : 466.0) mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2C; regulates the activation of the Snf1-related kinase OST1 by abscisic acid.; homology to ABI1 (HAB1); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: homology to ABI2 (TAIR:AT1G17550.1). & (gnl|cdd|35917 : 244.0) no description available & (gnl|cdd|29062 : 235.0) no description available & (reliability: 848.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf21140_146257-153379' '(at3g24650 : 388.0) Homologous to the maize transcription factor Viviparous-1. Full length ABI3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of ABI3 requires the B3 DNA-binding domain and an activation domain. In addition to the known N-terminal-located activation domain, a second transcription activation domain was found in the B1 region of ABI3. ABI3 is essential for seed maturation. Regulator of the transition between embryo maturation and early seedling development. Putative seed-specific transcriptional activator. Mutants exhibit decreased responsiveness to ABA suggesting that ABI3 protein participates in the ABA perception/transduction cascade. Based on double mutant analyses, ABI3 interacts genetically with both FUS3 and LEC1 and is involved in controlling accumulation of chlorophyll and anthocyanins, sensitivity to abscisic acid, and expression of the members of the 12S storage protein gene family. In addition, both FUS3 and LEC1 regulate positively the abundance of the ABI3 protein in the seed. Alternative splicing of ABI3 is developmentally regulated by SUA (AT3G54230).; ABA INSENSITIVE 3 (ABI3); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G26790.1); Has 4494 Blast hits to 2758 proteins in 300 species: Archae - 0; Bacteria - 132; Metazoa - 1104; Fungi - 405; Plants - 1155; Viruses - 101; Other Eukaryotes - 1597 (source: NCBI BLink). & (p26307|viv1_maize : 284.0) Regulatory protein viviparous-1 - Zea mays (Maize) & (gnl|cdd|85971 : 84.3) no description available & (reliability: 776.0) & (original description: Putative ABI3, Description = B3 domain-containing transcription factor ABI3, PFAM = PF02362)' T '17.1.2' 'hormone metabolism.abscisic acid.signal transduction' 'niben101scf25868_8314-12957' '(at4g34000 : 257.0) Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.; abscisic acid responsive elements-binding factor 3 (ABF3); FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.2); Has 1814 Blast hits to 1660 proteins in 150 species: Archae - 0; Bacteria - 4; Metazoa - 247; Fungi - 25; Plants - 1446; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 514.0) & (original description: Putative ABF3, Description = ABSCISIC ACID-INSENSITIVE 5-like protein 6, PFAM = PF00170)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'nbv0.3scaffold739_16269-30875' '(at5g08350 : 196.0) GRAM domain-containing protein / ABA-responsive protein-related; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain-containing protein / ABA-responsive protein-related (TAIR:AT5G23370.1); Has 358 Blast hits to 358 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 358; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative , Description = , PFAM = PF02893)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'nbv0.3scaffold4649_1-12847' '(at2g22475 : 271.0) Encodes GL2-expression modulator (GEM). Involved in the spatial control of cell division, patterning and differentiation of Arabidopsis root epidermal cells. GEM interacts with CDT1, a DNA replication protein and TTG1 (TRANSPARENT TESTA GLABRA1), a WD40-repeat protein involved in GL2-dependent cell fate decision. GEM seems to participate in the maintenance of a repressor histone H3 epigenetics status of the GL2 and CPC (CAPRICE) promoters.; GL2-EXPRESSION MODULATOR (GEM); CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain family protein (TAIR:AT4G40100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 542.0) & (original description: Putative GEM, Description = GEM-like protein 5, PFAM = PF02893)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'nbv0.3scaffold22470_5351-13828' '(at4g36720 : 226.0) HVA22-like protein K (HVA22K); CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue B (TAIR:AT5G62490.1); Has 1515 Blast hits to 1515 proteins in 211 species: Archae - 0; Bacteria - 0; Metazoa - 701; Fungi - 226; Plants - 493; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|36936 : 114.0) no description available & (gnl|cdd|86250 : 104.0) no description available & (reliability: 452.0) & (original description: Putative HVA22K, Description = HVA22-like protein, PFAM = PF03134)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'nbv0.3scaffold23540_27171-31168' '(at2g29380 : 325.0) highly ABA-induced PP2C gene 3 (HAI3); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 2 (TAIR:AT1G07430.1); Has 6960 Blast hits to 6933 proteins in 604 species: Archae - 4; Bacteria - 618; Metazoa - 1585; Fungi - 779; Plants - 2700; Viruses - 7; Other Eukaryotes - 1267 (source: NCBI BLink). & (gnl|cdd|35917 : 238.0) no description available & (gnl|cdd|47660 : 231.0) no description available & (reliability: 610.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'nbv0.3scaffold55721_2053-5777' '(at2g17770 : 119.0) Encodes a paralog of bZIP transcription factor FD. This protein interacts with FD and FT.; basic region/leucine zipper motif 27 (BZIP27); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT4G35900.1). & (reliability: 238.0) & (original description: Putative FDP, Description = bZIP transcription factor 27, PFAM = PF00170)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'nbv0.5scaffold738_481429-535408' '(at5g08350 : 172.0) GRAM domain-containing protein / ABA-responsive protein-related; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain-containing protein / ABA-responsive protein-related (TAIR:AT5G23370.1); Has 358 Blast hits to 358 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 358; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative , Description = , PFAM = PF02893)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'nbv0.5scaffold893_227146-245764' '(at1g28200 : 283.0) VirF-interacting protein FIP1; FH interacting protein 1 (FIP1); CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain family protein (TAIR:AT2G22475.1); Has 416 Blast hits to 413 proteins in 43 species: Archae - 4; Bacteria - 12; Metazoa - 9; Fungi - 9; Plants - 369; Viruses - 1; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 566.0) & (original description: Putative GEM, Description = GLABRA2 expression modulator, PFAM = PF02893)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'nbv0.5scaffold1116_374363-378540' '(at1g69700 : 226.0) Part of the AtHVA22 family. Protein expression is ABA- and stress-inducible.; HVA22 homologue C (HVA22C); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, hyperosmotic salinity response, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue A (TAIR:AT1G74520.1); Has 1462 Blast hits to 1462 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 635; Fungi - 218; Plants - 519; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (gnl|cdd|36936 : 130.0) no description available & (gnl|cdd|86250 : 113.0) no description available & (q07764|hva22_horvu : 95.9) Protein HVA22 - Hordeum vulgare (Barley) & (reliability: 452.0) & (original description: Putative HVA22C, Description = HVA22-like protein c, PFAM = PF03134)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'nbv0.5scaffold3700_139736-144167' '(at1g45249 : 236.0) Leucine zipper transcription factor that binds to the abscisic acid (ABA)ñresponsive element (ABRE) motif in the promoter region of ABA-inducible genes. Enhances drought tolerance in vegetative tissues. Required for normal glucose response. Localized in the nucleus. Expressed constitutively in roots, leaf vascular tissues, and hydathodes or in all tissues under stress conditions. It's phosphorylated by a ABA-activated 42-KDa kinase. Overexpression of the phosphorylated active form of AREB1 expressed many ABA-inducible genes, such as RD29B, without ABA treatment.; abscisic acid responsive elements-binding factor 2 (ABF2); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: abscisic acid responsive elements-binding factor 3 (TAIR:AT4G34000.2). & (reliability: 472.0) & (original description: Putative ABF2, Description = Abscisic acid responsive elements-binding factor 2, PFAM = PF00170)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'nbv0.5scaffold3943_171426-175707' '(at4g34000 : 218.0) Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.; abscisic acid responsive elements-binding factor 3 (ABF3); FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.2); Has 1814 Blast hits to 1660 proteins in 150 species: Archae - 0; Bacteria - 4; Metazoa - 247; Fungi - 25; Plants - 1446; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative ABF3, Description = ABSCISIC ACID-INSENSITIVE 5-like protein 6, PFAM = PF00170)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'nbv0.5scaffold4547_23231-32990' '(at1g74520 : 123.0) Part of the AtHVA22a family. Protein expression is ABA- and stress-inducible.; HVA22 homologue A (HVA22A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue C (TAIR:AT1G69700.1); Has 1523 Blast hits to 1523 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 215; Plants - 516; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|86250 : 106.0) no description available & (gnl|cdd|36936 : 97.8) no description available & (reliability: 246.0) & (original description: Putative PGSC0003DMG400030143, Description = HVA22-like protein, PFAM = PF12874;PF12874;PF03134)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'nbv0.5scaffold4871_67756-93869' '(at5g23370 : 196.0) GRAM domain-containing protein / ABA-responsive protein-related; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain-containing protein / ABA-responsive protein-related (TAIR:AT5G23350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative , Description = , PFAM = PF02893)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben044scf00008502ctg012_3635-13365' '(at2g22475 : 229.0) Encodes GL2-expression modulator (GEM). Involved in the spatial control of cell division, patterning and differentiation of Arabidopsis root epidermal cells. GEM interacts with CDT1, a DNA replication protein and TTG1 (TRANSPARENT TESTA GLABRA1), a WD40-repeat protein involved in GL2-dependent cell fate decision. GEM seems to participate in the maintenance of a repressor histone H3 epigenetics status of the GL2 and CPC (CAPRICE) promoters.; GL2-EXPRESSION MODULATOR (GEM); CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain family protein (TAIR:AT4G40100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative GEM, Description = GLABRA2 expression modulator, PFAM = PF02893)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben044scf00020494ctg003_1077-4384' '(at5g23370 : 197.0) GRAM domain-containing protein / ABA-responsive protein-related; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain-containing protein / ABA-responsive protein-related (TAIR:AT5G23350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative , Description = , PFAM = PF02893)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben044scf00020981ctg003_1639-4793' '(at5g08350 : 197.0) GRAM domain-containing protein / ABA-responsive protein-related; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain-containing protein / ABA-responsive protein-related (TAIR:AT5G23370.1); Has 358 Blast hits to 358 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 358; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative , Description = , PFAM = PF02893)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben044scf00028352ctg007_38582-41160' '(at2g47770 : 135.0) Encodes a membrane-bound protein designated AtTSPO (Arabidopsis thaliana TSPO-related). AtTSPO is related to the bacterial outer membrane tryptophan-rich sensory protein (TspO) and the mammalian mitochondrial 18 kDa Translocator Protein (18 kDa TSPO), members of the TspO/MBR domain-containing membrane proteins. Mainly detected in dry seeds, but can be induced in vegetative tissues by osmotic or salt stress or abscisic acid treatment. Located in endoplasmic reticulum and the Golgi stacks.; TSPO(outer membrane tryptophan-rich sensory protein)-related (TSPO); CONTAINS InterPro DOMAIN/s: TspO/MBR-related protein (InterPro:IPR004307); Has 567 Blast hits to 567 proteins in 188 species: Archae - 24; Bacteria - 226; Metazoa - 151; Fungi - 6; Plants - 53; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative TSPO, Description = Translocator protein homolog, PFAM = PF03073)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben044scf00035586ctg001_10529-15079' '(at4g36720 : 132.0) HVA22-like protein K (HVA22K); CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue B (TAIR:AT5G62490.1); Has 1515 Blast hits to 1515 proteins in 211 species: Archae - 0; Bacteria - 0; Metazoa - 701; Fungi - 226; Plants - 493; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative HVA22K, Description = HVA22-like protein, PFAM = PF03134)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben044scf00048421ctg000_1-3200' '(at1g74520 : 113.0) Part of the AtHVA22a family. Protein expression is ABA- and stress-inducible.; HVA22 homologue A (HVA22A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue C (TAIR:AT1G69700.1); Has 1523 Blast hits to 1523 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 215; Plants - 516; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|36936 : 85.0) no description available & (gnl|cdd|86250 : 83.7) no description available & (reliability: 226.0) & (original description: Putative PGSC0003DMG400004398, Description = HVA22-like protein, PFAM = PF03134)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf00107_26794-31471' '(at4g34000 : 197.0) Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.; abscisic acid responsive elements-binding factor 3 (ABF3); FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.2); Has 1814 Blast hits to 1660 proteins in 150 species: Archae - 0; Bacteria - 4; Metazoa - 247; Fungi - 25; Plants - 1446; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative bZIP, Description = ABSCISIC ACID-INSENSITIVE 5-like protein 2, PFAM = PF00170)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf00321_564923-569982' '(at4g36720 : 230.0) HVA22-like protein K (HVA22K); CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue B (TAIR:AT5G62490.1); Has 1515 Blast hits to 1515 proteins in 211 species: Archae - 0; Bacteria - 0; Metazoa - 701; Fungi - 226; Plants - 493; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|36936 : 122.0) no description available & (gnl|cdd|86250 : 116.0) no description available & (reliability: 460.0) & (original description: Putative HVA22K, Description = HVA22-like protein, PFAM = PF03134)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf00393_187752-193017' '(at3g56850 : 189.0) Encodes an ABA-responsive element binding protein with a bZIP domain. Located in the nucleus and expressed in the embryo during seed maturation.; ABA-responsive element binding protein 3 (AREB3); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, response to stress; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G41070.2); Has 2031 Blast hits to 1971 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 263; Fungi - 29; Plants - 1672; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative bZIP, Description = Basic leucine zipper protein, PFAM = PF00170)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf00530_1047619-1057309' '(at3g11410 : 251.0) Encodes protein phosphatase 2C. Negative regulator of ABA signalling. Expressed in seeds during germination. mRNA up-regulated by drought and ABA.; protein phosphatase 2CA (PP2CA); FUNCTIONS IN: protein binding, protein serine/threonine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 6 processes; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 2 (TAIR:AT1G07430.1); Has 6894 Blast hits to 6854 proteins in 510 species: Archae - 4; Bacteria - 413; Metazoa - 1689; Fungi - 773; Plants - 2747; Viruses - 7; Other Eukaryotes - 1261 (source: NCBI BLink). & (gnl|cdd|29062 : 242.0) no description available & (gnl|cdd|35917 : 235.0) no description available & (reliability: 480.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf00530_1047625-1057258' '(at3g11410 : 236.0) Encodes protein phosphatase 2C. Negative regulator of ABA signalling. Expressed in seeds during germination. mRNA up-regulated by drought and ABA.; protein phosphatase 2CA (PP2CA); FUNCTIONS IN: protein binding, protein serine/threonine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 6 processes; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 2 (TAIR:AT1G07430.1); Has 6894 Blast hits to 6854 proteins in 510 species: Archae - 4; Bacteria - 413; Metazoa - 1689; Fungi - 773; Plants - 2747; Viruses - 7; Other Eukaryotes - 1261 (source: NCBI BLink). & (gnl|cdd|29062 : 234.0) no description available & (gnl|cdd|35917 : 229.0) no description available & (reliability: 448.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf00821_1392216-1396259' '(at5g13200 : 306.0) GRAM domain family protein; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain family protein (TAIR:AT2G22475.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 612.0) & (original description: Putative At5g13200, Description = GEM-like protein 5, PFAM = PF02893)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf01046_247460-250427' '(at4g24960 : 145.0) Homologous to a eukaryote specific ABA- and stress-inducible gene first isolated from barley. Groups in one subfamily with ATHVA22E. Along with other members of the ATHVA22 family, it may be involved in regulation of autophagy during development.; HVA22 homologue D (HVA22D); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 7 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue E (TAIR:AT5G50720.1). & (q07764|hva22_horvu : 145.0) Protein HVA22 - Hordeum vulgare (Barley) & (gnl|cdd|36936 : 107.0) no description available & (gnl|cdd|86250 : 98.8) no description available & (reliability: 290.0) & (original description: Putative HVA22E, Description = HVA22-like protein e, PFAM = PF03134)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf01267_1068483-1102701' '(at2g22475 : 272.0) Encodes GL2-expression modulator (GEM). Involved in the spatial control of cell division, patterning and differentiation of Arabidopsis root epidermal cells. GEM interacts with CDT1, a DNA replication protein and TTG1 (TRANSPARENT TESTA GLABRA1), a WD40-repeat protein involved in GL2-dependent cell fate decision. GEM seems to participate in the maintenance of a repressor histone H3 epigenetics status of the GL2 and CPC (CAPRICE) promoters.; GL2-EXPRESSION MODULATOR (GEM); CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain family protein (TAIR:AT4G40100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 544.0) & (original description: Putative GEM, Description = GLABRA2 expression modulator, PFAM = PF02893)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf01784_274254-299871' '(at1g45249 : 269.0) Leucine zipper transcription factor that binds to the abscisic acid (ABA)ñresponsive element (ABRE) motif in the promoter region of ABA-inducible genes. Enhances drought tolerance in vegetative tissues. Required for normal glucose response. Localized in the nucleus. Expressed constitutively in roots, leaf vascular tissues, and hydathodes or in all tissues under stress conditions. It's phosphorylated by a ABA-activated 42-KDa kinase. Overexpression of the phosphorylated active form of AREB1 expressed many ABA-inducible genes, such as RD29B, without ABA treatment.; abscisic acid responsive elements-binding factor 2 (ABF2); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: abscisic acid responsive elements-binding factor 3 (TAIR:AT4G34000.2). & (reliability: 538.0) & (original description: Putative ABF2, Description = ABSCISIC ACID-INSENSITIVE 5-like protein 5, PFAM = PF00170)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf01812_445024-452244' '(at3g56850 : 246.0) Encodes an ABA-responsive element binding protein with a bZIP domain. Located in the nucleus and expressed in the embryo during seed maturation.; ABA-responsive element binding protein 3 (AREB3); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, response to stress; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G41070.2); Has 2031 Blast hits to 1971 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 263; Fungi - 29; Plants - 1672; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative bZIP, Description = Basic leucine zipper protein, PFAM = PF00170)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf01999_445459-457230' '(at1g74520 : 105.0) Part of the AtHVA22a family. Protein expression is ABA- and stress-inducible.; HVA22 homologue A (HVA22A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue C (TAIR:AT1G69700.1); Has 1523 Blast hits to 1523 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 215; Plants - 516; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|86250 : 99.5) no description available & (gnl|cdd|36936 : 87.4) no description available & (reliability: 210.0) & (original description: Putative PGSC0003DMG400030143, Description = HVA22-like protein, PFAM = PF12874;PF12874;PF12874;PF03134)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf01999_504759-507426' '(at1g74520 : 87.4) Part of the AtHVA22a family. Protein expression is ABA- and stress-inducible.; HVA22 homologue A (HVA22A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue C (TAIR:AT1G69700.1); Has 1523 Blast hits to 1523 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 215; Plants - 516; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative PGSC0003DMG400004398, Description = HVA22-like protein, PFAM = PF03134)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf02155_421555-440006' '(at4g36720 : 225.0) HVA22-like protein K (HVA22K); CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue B (TAIR:AT5G62490.1); Has 1515 Blast hits to 1515 proteins in 211 species: Archae - 0; Bacteria - 0; Metazoa - 701; Fungi - 226; Plants - 493; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|36936 : 117.0) no description available & (gnl|cdd|86250 : 111.0) no description available & (reliability: 450.0) & (original description: Putative HVA22K, Description = HVA22-like protein, PFAM = PF03134)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf03886_537386-540768' '(q07764|hva22_horvu : 147.0) Protein HVA22 - Hordeum vulgare (Barley) & (at4g24960 : 146.0) Homologous to a eukaryote specific ABA- and stress-inducible gene first isolated from barley. Groups in one subfamily with ATHVA22E. Along with other members of the ATHVA22 family, it may be involved in regulation of autophagy during development.; HVA22 homologue D (HVA22D); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 7 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue E (TAIR:AT5G50720.1). & (gnl|cdd|36936 : 117.0) no description available & (gnl|cdd|86250 : 105.0) no description available & (reliability: 292.0) & (original description: Putative HVA22E, Description = HVA22-like protein e, PFAM = PF03134)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf03930_614019-618085' '(at1g74520 : 232.0) Part of the AtHVA22a family. Protein expression is ABA- and stress-inducible.; HVA22 homologue A (HVA22A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue C (TAIR:AT1G69700.1); Has 1523 Blast hits to 1523 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 215; Plants - 516; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|36936 : 133.0) no description available & (gnl|cdd|86250 : 114.0) no description available & (q07764|hva22_horvu : 100.0) Protein HVA22 - Hordeum vulgare (Barley) & (reliability: 464.0) & (original description: Putative HVA22A, Description = HVA22-like protein a, PFAM = PF03134)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf04632_917110-925242' '(at3g56850 : 242.0) Encodes an ABA-responsive element binding protein with a bZIP domain. Located in the nucleus and expressed in the embryo during seed maturation.; ABA-responsive element binding protein 3 (AREB3); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, response to stress; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G41070.2); Has 2031 Blast hits to 1971 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 263; Fungi - 29; Plants - 1672; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (reliability: 484.0) & (original description: Putative bZIP, Description = Basic leucine zipper protein, PFAM = PF00170)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf04950_7037-10325' '(q07764|hva22_horvu : 144.0) Protein HVA22 - Hordeum vulgare (Barley) & (at4g24960 : 141.0) Homologous to a eukaryote specific ABA- and stress-inducible gene first isolated from barley. Groups in one subfamily with ATHVA22E. Along with other members of the ATHVA22 family, it may be involved in regulation of autophagy during development.; HVA22 homologue D (HVA22D); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 7 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue E (TAIR:AT5G50720.1). & (gnl|cdd|36936 : 112.0) no description available & (gnl|cdd|86250 : 102.0) no description available & (reliability: 282.0) & (original description: Putative HVA22, Description = HVA22-like protein, PFAM = PF03134)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf05177_99565-102858' '(at5g23370 : 190.0) GRAM domain-containing protein / ABA-responsive protein-related; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain-containing protein / ABA-responsive protein-related (TAIR:AT5G23350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 380.0) & (original description: Putative , Description = , PFAM = PF02893)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf05177_107866-111454' '(at5g23370 : 181.0) GRAM domain-containing protein / ABA-responsive protein-related; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain-containing protein / ABA-responsive protein-related (TAIR:AT5G23350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative , Description = , PFAM = PF02893)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf05177_129477-133265' '(at5g08350 : 189.0) GRAM domain-containing protein / ABA-responsive protein-related; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain-containing protein / ABA-responsive protein-related (TAIR:AT5G23370.1); Has 358 Blast hits to 358 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 358; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative , Description = , PFAM = PF02893)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf05188_109383-112709' '(at5g23370 : 198.0) GRAM domain-containing protein / ABA-responsive protein-related; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain-containing protein / ABA-responsive protein-related (TAIR:AT5G23350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative , Description = , PFAM = PF02893)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf06376_518409-521762' '(at2g17770 : 92.4) Encodes a paralog of bZIP transcription factor FD. This protein interacts with FD and FT.; basic region/leucine zipper motif 27 (BZIP27); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT4G35900.1). & (reliability: 184.8) & (original description: Putative SPGB, Description = Self-pruning G-box protein, PFAM = PF00170)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf06382_386094-390760' '(at1g74520 : 86.7) Part of the AtHVA22a family. Protein expression is ABA- and stress-inducible.; HVA22 homologue A (HVA22A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue C (TAIR:AT1G69700.1); Has 1523 Blast hits to 1523 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 215; Plants - 516; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative PGSC0003DMG400009332, Description = HVA22-like protein, PFAM = PF12874;PF13456;PF03134)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf06424_49050-52591' '(at5g08350 : 161.0) GRAM domain-containing protein / ABA-responsive protein-related; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain-containing protein / ABA-responsive protein-related (TAIR:AT5G23370.1); Has 358 Blast hits to 358 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 358; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative , Description = , PFAM = PF02893)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf06628_93915-96493' '(at2g47770 : 142.0) Encodes a membrane-bound protein designated AtTSPO (Arabidopsis thaliana TSPO-related). AtTSPO is related to the bacterial outer membrane tryptophan-rich sensory protein (TspO) and the mammalian mitochondrial 18 kDa Translocator Protein (18 kDa TSPO), members of the TspO/MBR domain-containing membrane proteins. Mainly detected in dry seeds, but can be induced in vegetative tissues by osmotic or salt stress or abscisic acid treatment. Located in endoplasmic reticulum and the Golgi stacks.; TSPO(outer membrane tryptophan-rich sensory protein)-related (TSPO); CONTAINS InterPro DOMAIN/s: TspO/MBR-related protein (InterPro:IPR004307); Has 567 Blast hits to 567 proteins in 188 species: Archae - 24; Bacteria - 226; Metazoa - 151; Fungi - 6; Plants - 53; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative TSPO, Description = Translocator protein homolog, PFAM = PF03073)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf06628_94137-99135' '(at2g47770 : 115.0) Encodes a membrane-bound protein designated AtTSPO (Arabidopsis thaliana TSPO-related). AtTSPO is related to the bacterial outer membrane tryptophan-rich sensory protein (TspO) and the mammalian mitochondrial 18 kDa Translocator Protein (18 kDa TSPO), members of the TspO/MBR domain-containing membrane proteins. Mainly detected in dry seeds, but can be induced in vegetative tissues by osmotic or salt stress or abscisic acid treatment. Located in endoplasmic reticulum and the Golgi stacks.; TSPO(outer membrane tryptophan-rich sensory protein)-related (TSPO); CONTAINS InterPro DOMAIN/s: TspO/MBR-related protein (InterPro:IPR004307); Has 567 Blast hits to 567 proteins in 188 species: Archae - 24; Bacteria - 226; Metazoa - 151; Fungi - 6; Plants - 53; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative TSPO, Description = Benzodiazepine receptor-related family protein, PFAM = PF03073)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf07278_31158-34952' '(at4g34000 : 194.0) Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.; abscisic acid responsive elements-binding factor 3 (ABF3); FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.2); Has 1814 Blast hits to 1660 proteins in 150 species: Archae - 0; Bacteria - 4; Metazoa - 247; Fungi - 25; Plants - 1446; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative ABF2, Description = ABSCISIC ACID-INSENSITIVE 5-like protein 5, PFAM = PF00170)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf07549_244656-251433' '(at1g45249 : 247.0) Leucine zipper transcription factor that binds to the abscisic acid (ABA)ñresponsive element (ABRE) motif in the promoter region of ABA-inducible genes. Enhances drought tolerance in vegetative tissues. Required for normal glucose response. Localized in the nucleus. Expressed constitutively in roots, leaf vascular tissues, and hydathodes or in all tissues under stress conditions. It's phosphorylated by a ABA-activated 42-KDa kinase. Overexpression of the phosphorylated active form of AREB1 expressed many ABA-inducible genes, such as RD29B, without ABA treatment.; abscisic acid responsive elements-binding factor 2 (ABF2); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: abscisic acid responsive elements-binding factor 3 (TAIR:AT4G34000.2). & (reliability: 494.0) & (original description: Putative ABF2, Description = ABSCISIC ACID-INSENSITIVE 5-like protein 5, PFAM = PF00170)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf08355_369445-374752' '(q07764|hva22_horvu : 150.0) Protein HVA22 - Hordeum vulgare (Barley) & (at4g24960 : 148.0) Homologous to a eukaryote specific ABA- and stress-inducible gene first isolated from barley. Groups in one subfamily with ATHVA22E. Along with other members of the ATHVA22 family, it may be involved in regulation of autophagy during development.; HVA22 homologue D (HVA22D); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 7 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue E (TAIR:AT5G50720.1). & (gnl|cdd|36936 : 117.0) no description available & (gnl|cdd|86250 : 106.0) no description available & (reliability: 296.0) & (original description: Putative HVA22E, Description = HVA22-like protein e, PFAM = PF03134)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf08936_972590-975717' '(q07764|hva22_horvu : 154.0) Protein HVA22 - Hordeum vulgare (Barley) & (at4g24960 : 152.0) Homologous to a eukaryote specific ABA- and stress-inducible gene first isolated from barley. Groups in one subfamily with ATHVA22E. Along with other members of the ATHVA22 family, it may be involved in regulation of autophagy during development.; HVA22 homologue D (HVA22D); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 7 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue E (TAIR:AT5G50720.1). & (gnl|cdd|36936 : 111.0) no description available & (gnl|cdd|86250 : 103.0) no description available & (reliability: 304.0) & (original description: Putative HVA22E, Description = HVA22-like protein e, PFAM = PF03134)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf10085_173877-177440' '(at1g74520 : 107.0) Part of the AtHVA22a family. Protein expression is ABA- and stress-inducible.; HVA22 homologue A (HVA22A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue C (TAIR:AT1G69700.1); Has 1523 Blast hits to 1523 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 215; Plants - 516; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|86250 : 93.4) no description available & (gnl|cdd|36936 : 90.1) no description available & (reliability: 214.0) & (original description: Putative PGSC0003DMG400010683, Description = HVA22-like protein, PFAM = PF03134;PF12874;PF12874)' T '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'niben101scf20961_14005-25299' '(at2g22475 : 323.0) Encodes GL2-expression modulator (GEM). Involved in the spatial control of cell division, patterning and differentiation of Arabidopsis root epidermal cells. GEM interacts with CDT1, a DNA replication protein and TTG1 (TRANSPARENT TESTA GLABRA1), a WD40-repeat protein involved in GL2-dependent cell fate decision. GEM seems to participate in the maintenance of a repressor histone H3 epigenetics status of the GL2 and CPC (CAPRICE) promoters.; GL2-EXPRESSION MODULATOR (GEM); CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain family protein (TAIR:AT4G40100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 646.0) & (original description: Putative GEM, Description = GLABRA2 expression modulator, PFAM = PF02893)' T '17.2' 'hormone metabolism.auxin' 'nbv0.3scaffold39790_14626-19516' '(at3g10870 : 328.0) Encodes a methyl IAA esterase. Methyl IAA is believed to be an inactive form of auxin that needs to be demethylated to exert a biological effect. MES17 does not act on methyl JA, MeSA, MeGA4, or MEGA9 in vitro. This gene is expressed in several tissues of seedlings and adult plants, with a higher relative level of expression in the seedling shoot apex and the adult stem.; methyl esterase 17 (MES17); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 18 (TAIR:AT5G58310.1); Has 1383 Blast hits to 1383 proteins in 290 species: Archae - 0; Bacteria - 591; Metazoa - 1; Fungi - 15; Plants - 599; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink). & (q40708|pir7a_orysa : 135.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 656.0) & (original description: Putative MES17, Description = Methylesterase 17, PFAM = PF00561)' T '17.2' 'hormone metabolism.auxin' 'niben101scf03679_27046-31858' '(at3g10870 : 331.0) Encodes a methyl IAA esterase. Methyl IAA is believed to be an inactive form of auxin that needs to be demethylated to exert a biological effect. MES17 does not act on methyl JA, MeSA, MeGA4, or MEGA9 in vitro. This gene is expressed in several tissues of seedlings and adult plants, with a higher relative level of expression in the seedling shoot apex and the adult stem.; methyl esterase 17 (MES17); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 18 (TAIR:AT5G58310.1); Has 1383 Blast hits to 1383 proteins in 290 species: Archae - 0; Bacteria - 591; Metazoa - 1; Fungi - 15; Plants - 599; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink). & (p52704|hnl_hevbr : 124.0) (S)-acetone-cyanohydrin lyase (EC 4.1.2.39) ((S)-hydroxynitrile lyase) ((S)-hydroxynitrilase) (Oxynitrilase) - Hevea brasiliensis (Para rubber tree) & (reliability: 662.0) & (original description: Putative MES17, Description = Methylesterase 17, PFAM = PF12146)' T '17.2' 'hormone metabolism.auxin' 'niben101scf04903_146542-149192' '(at3g10870 : 169.0) Encodes a methyl IAA esterase. Methyl IAA is believed to be an inactive form of auxin that needs to be demethylated to exert a biological effect. MES17 does not act on methyl JA, MeSA, MeGA4, or MEGA9 in vitro. This gene is expressed in several tissues of seedlings and adult plants, with a higher relative level of expression in the seedling shoot apex and the adult stem.; methyl esterase 17 (MES17); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 18 (TAIR:AT5G58310.1); Has 1383 Blast hits to 1383 proteins in 290 species: Archae - 0; Bacteria - 591; Metazoa - 1; Fungi - 15; Plants - 599; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink). & (p52704|hnl_hevbr : 106.0) (S)-acetone-cyanohydrin lyase (EC 4.1.2.39) ((S)-hydroxynitrile lyase) ((S)-hydroxynitrilase) (Oxynitrilase) - Hevea brasiliensis (Para rubber tree) & (reliability: 338.0) & (original description: Putative Os11g0117900, Description = Os11g0117900 protein, PFAM = PF00561)' T '17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'nbv0.3scaffold2301_6564-12285' '(at5g55250 : 589.0) Encodes an enzyme which specifically converts IAA to its methyl ester form MelIAA. This gene belongs to the family of carboxyl methyltransferases whose members catalyze the transfer of the methyl group from S-adenosyl-L-methionine to carboxylic acid-containing substrates to form small molecule methyl esters. Expression of TCP genes is downregulated in mutant iamt1-D.; IAA carboxylmethyltransferase 1 (IAMT1); CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: gibberellic acid methyltransferase 2 (TAIR:AT5G56300.1); Has 921 Blast hits to 905 proteins in 124 species: Archae - 0; Bacteria - 69; Metazoa - 9; Fungi - 5; Plants - 719; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (gnl|cdd|86349 : 348.0) no description available & (q9fyz9|bamt_antma : 188.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 1178.0) & (original description: Putative IAMT1, Description = Indole-3-acetate O-methyltransferase 1, PFAM = PF03492)' T '17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'nbv0.3scaffold8469_36445-41910' '(at3g02875 : 481.0) Hydrolyzes amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA), including IAA-Leu and IAA-Phe. Uses Mg and Co ions as cofactors.; IAA-LEUCINE RESISTANT 1 (ILR1); FUNCTIONS IN: metallopeptidase activity, IAA-Leu conjugate hydrolase activity, IAA-Phe conjugate hydrolase activity; INVOLVED IN: proteolysis, auxin metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439); BEST Arabidopsis thaliana protein match is: IAA-leucine resistant (ILR)-like 2 (TAIR:AT5G56660.1); Has 13461 Blast hits to 13451 proteins in 1948 species: Archae - 137; Bacteria - 10103; Metazoa - 64; Fungi - 266; Plants - 279; Viruses - 0; Other Eukaryotes - 2612 (source: NCBI BLink). & (gnl|cdd|31662 : 396.0) no description available & (reliability: 962.0) & (original description: Putative ILL7, Description = IAA-amino acid hydrolase ILR1-like 7, PFAM = PF01546;PF07687)' T '17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'nbv0.5scaffold148_1014925-1018124' '(q42965|nrl4_tobac : 174.0) Nitrilase 4 (EC 3.5.5.1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36023 : 169.0) no description available & (at5g22300 : 168.0) encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway.; nitrilase 4 (NIT4); CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), Nitrilase/cyanide hydratase, conserved site (InterPro:IPR000132); BEST Arabidopsis thaliana protein match is: nitrilase 3 (TAIR:AT3G44320.1); Has 7653 Blast hits to 7575 proteins in 1747 species: Archae - 162; Bacteria - 5078; Metazoa - 407; Fungi - 539; Plants - 330; Viruses - 11; Other Eukaryotes - 1126 (source: NCBI BLink). & (gnl|cdd|85033 : 97.0) no description available & (reliability: 312.0) & (original description: Putative nIT4, Description = Nitrilase, PFAM = PF00795)' T '17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'nbv0.5scaffold253_418977-421584' '(at2g31790 : 169.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: Uridine diphosphate glycosyltransferase 74E2 (TAIR:AT1G05680.1); Has 8757 Blast hits to 8682 proteins in 575 species: Archae - 0; Bacteria - 847; Metazoa - 2565; Fungi - 65; Plants - 5076; Viruses - 120; Other Eukaryotes - 84 (source: NCBI BLink). & (q41819|iaag_maize : 118.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 89.2) no description available & (reliability: 324.0) & (original description: Putative UGT3, Description = Glycosyltransferase, PFAM = PF00201)' T '17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben044scf00000492ctg004_1-10851' '(at3g02875 : 463.0) Hydrolyzes amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA), including IAA-Leu and IAA-Phe. Uses Mg and Co ions as cofactors.; IAA-LEUCINE RESISTANT 1 (ILR1); FUNCTIONS IN: metallopeptidase activity, IAA-Leu conjugate hydrolase activity, IAA-Phe conjugate hydrolase activity; INVOLVED IN: proteolysis, auxin metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439); BEST Arabidopsis thaliana protein match is: IAA-leucine resistant (ILR)-like 2 (TAIR:AT5G56660.1); Has 13461 Blast hits to 13451 proteins in 1948 species: Archae - 137; Bacteria - 10103; Metazoa - 64; Fungi - 266; Plants - 279; Viruses - 0; Other Eukaryotes - 2612 (source: NCBI BLink). & (gnl|cdd|31662 : 360.0) no description available & (reliability: 926.0) & (original description: Putative ILL3, Description = IAA-amino acid hydrolase ILR1-like 3, PFAM = PF01546;PF07687)' T '17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben044scf00017657ctg007_6289-9897' '(at4g15550 : 467.0) UDP-glucose:indole-3-acetate beta-D-glucosyltransferase; indole-3-acetate beta-D-glucosyltransferase (IAGLU); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 75B1 (TAIR:AT1G05560.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q41819|iaag_maize : 264.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 220.0) no description available & (gnl|cdd|79510 : 94.6) no description available & (reliability: 842.0) & (original description: Putative gt2, Description = Glycosyltransferase, PFAM = PF00201)' T '17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben044scf00048734ctg001_4689-10167' '(at1g51760 : 404.0) encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers.; IAA-ALANINE RESISTANT 3 (IAR3); FUNCTIONS IN: metallopeptidase activity, IAA-Ala conjugate hydrolase activity; INVOLVED IN: proteolysis, response to wounding; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168); BEST Arabidopsis thaliana protein match is: IAA-leucine resistant (ILR)-like gene 5 (TAIR:AT1G51780.1); Has 13368 Blast hits to 13360 proteins in 1987 species: Archae - 133; Bacteria - 9793; Metazoa - 95; Fungi - 261; Plants - 323; Viruses - 0; Other Eukaryotes - 2763 (source: NCBI BLink). & (gnl|cdd|31662 : 295.0) no description available & (reliability: 808.0) & (original description: Putative IAR3, Description = IAA-amino acid hydrolase 3, PFAM = PF01546;PF07687)' T '17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf00113_700552-703958' '(q43716|ufog_pethy : 854.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (at5g54010 : 342.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G53990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 170.0) no description available & (reliability: 616.0) & (original description: Putative RT, Description = Anthocyanidin 3-O-glucosyltransferase, PFAM = PF00201)' T '17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf00206_10263-16146' '(at1g51760 : 626.0) encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers.; IAA-ALANINE RESISTANT 3 (IAR3); FUNCTIONS IN: metallopeptidase activity, IAA-Ala conjugate hydrolase activity; INVOLVED IN: proteolysis, response to wounding; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168); BEST Arabidopsis thaliana protein match is: IAA-leucine resistant (ILR)-like gene 5 (TAIR:AT1G51780.1); Has 13368 Blast hits to 13360 proteins in 1987 species: Archae - 133; Bacteria - 9793; Metazoa - 95; Fungi - 261; Plants - 323; Viruses - 0; Other Eukaryotes - 2763 (source: NCBI BLink). & (gnl|cdd|31662 : 398.0) no description available & (reliability: 1252.0) & (original description: Putative ILL4, Description = IAA-amino acid hydrolase ILR1-like 4, PFAM = PF07687;PF01546)' T '17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf00551_534692-541990' '(at1g51760 : 617.0) encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers.; IAA-ALANINE RESISTANT 3 (IAR3); FUNCTIONS IN: metallopeptidase activity, IAA-Ala conjugate hydrolase activity; INVOLVED IN: proteolysis, response to wounding; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168); BEST Arabidopsis thaliana protein match is: IAA-leucine resistant (ILR)-like gene 5 (TAIR:AT1G51780.1); Has 13368 Blast hits to 13360 proteins in 1987 species: Archae - 133; Bacteria - 9793; Metazoa - 95; Fungi - 261; Plants - 323; Viruses - 0; Other Eukaryotes - 2763 (source: NCBI BLink). & (gnl|cdd|31662 : 411.0) no description available & (reliability: 1234.0) & (original description: Putative ILL2, Description = IAA-amino acid hydrolase ILR1-like 2, PFAM = PF07687;PF01546)' T '17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf00661_14430-20858' '(at1g24100 : 469.0) Encodes a UDP-glucose:thiohydroximate S-glucosyltransferase, involved in glucosinolate biosynthesis; UDP-glucosyl transferase 74B1 (UGT74B1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 74 F1 (TAIR:AT2G43840.1); Has 7754 Blast hits to 7677 proteins in 493 species: Archae - 0; Bacteria - 488; Metazoa - 2030; Fungi - 39; Plants - 5027; Viruses - 105; Other Eukaryotes - 65 (source: NCBI BLink). & (q41819|iaag_maize : 334.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 220.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 938.0) & (original description: Putative UGT74B1, Description = UDP-glycosyltransferase 74B1, PFAM = PF00201)' T '17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf01494_825708-830664' '(at1g51760 : 468.0) encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers.; IAA-ALANINE RESISTANT 3 (IAR3); FUNCTIONS IN: metallopeptidase activity, IAA-Ala conjugate hydrolase activity; INVOLVED IN: proteolysis, response to wounding; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168); BEST Arabidopsis thaliana protein match is: IAA-leucine resistant (ILR)-like gene 5 (TAIR:AT1G51780.1); Has 13368 Blast hits to 13360 proteins in 1987 species: Archae - 133; Bacteria - 9793; Metazoa - 95; Fungi - 261; Plants - 323; Viruses - 0; Other Eukaryotes - 2763 (source: NCBI BLink). & (gnl|cdd|31662 : 422.0) no description available & (reliability: 936.0) & (original description: Putative ILL4, Description = IAA-amino acid hydrolase ILR1-like 4, PFAM = PF01546;PF07687)' T '17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf01660_54304-57716' '(at4g15550 : 442.0) UDP-glucose:indole-3-acetate beta-D-glucosyltransferase; indole-3-acetate beta-D-glucosyltransferase (IAGLU); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 75B1 (TAIR:AT1G05560.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q41819|iaag_maize : 256.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 210.0) no description available & (gnl|cdd|79510 : 95.0) no description available & (reliability: 818.0) & (original description: Putative gt2, Description = Glycosyltransferase, PFAM = PF00201)' T '17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf01660_230122-233534' '(at4g14090 : 364.0) The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring.; UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, anthocyanin 5-O-glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: indole-3-acetate beta-D-glucosyltransferase (TAIR:AT4G15550.1); Has 7764 Blast hits to 7700 proteins in 467 species: Archae - 0; Bacteria - 501; Metazoa - 2108; Fungi - 44; Plants - 4999; Viruses - 48; Other Eukaryotes - 64 (source: NCBI BLink). & (q41819|iaag_maize : 188.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 188.0) no description available & (gnl|cdd|79510 : 93.9) no description available & (reliability: 708.0) & (original description: Putative UGT75C1, Description = UDP-glycosyltransferase 75C1, PFAM = PF00201)' T '17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf01660_262101-265555' '(at1g05530 : 374.0) Encodes a protein with glucosyltransferase activity with high sequence homology to UGT1 (AT1G05560). It belongs to an UGT subfamily that binds UDP-glucose but not UDP-glucuronate, UDP-galactose, or UDP-rhamnose as the glycosyl donor. UGT2 was shown to be able to use abscisic acid as glycosylation substrate in the presence of UDP-glucose.; UDP-glucosyl transferase 75B2 (UGT75B2); FUNCTIONS IN: UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: sperm cell, root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 75B1 (TAIR:AT1G05560.1); Has 7198 Blast hits to 7135 proteins in 463 species: Archae - 0; Bacteria - 427; Metazoa - 1573; Fungi - 32; Plants - 5007; Viruses - 111; Other Eukaryotes - 48 (source: NCBI BLink). & (q41819|iaag_maize : 248.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 195.0) no description available & (gnl|cdd|79510 : 95.0) no description available & (reliability: 744.0) & (original description: Putative UGT75L6, Description = Crocetin glucosyltransferase, chloroplastic, PFAM = PF00201)' T '17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf02173_27164-30032' '(q43716|ufog_pethy : 854.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (at5g54010 : 342.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G53990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 163.0) no description available & (reliability: 616.0) & (original description: Putative rt, Description = Glycosyltransferase, PFAM = PF00201)' T '17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf03227_489844-495971' '(at3g02875 : 494.0) Hydrolyzes amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA), including IAA-Leu and IAA-Phe. Uses Mg and Co ions as cofactors.; IAA-LEUCINE RESISTANT 1 (ILR1); FUNCTIONS IN: metallopeptidase activity, IAA-Leu conjugate hydrolase activity, IAA-Phe conjugate hydrolase activity; INVOLVED IN: proteolysis, auxin metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439); BEST Arabidopsis thaliana protein match is: IAA-leucine resistant (ILR)-like 2 (TAIR:AT5G56660.1); Has 13461 Blast hits to 13451 proteins in 1948 species: Archae - 137; Bacteria - 10103; Metazoa - 64; Fungi - 266; Plants - 279; Viruses - 0; Other Eukaryotes - 2612 (source: NCBI BLink). & (gnl|cdd|31662 : 396.0) no description available & (reliability: 988.0) & (original description: Putative ILL3, Description = IAA-amino acid hydrolase ILR1-like 3, PFAM = PF01546;PF07687)' T '17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf03969_191782-194344' '(at1g05530 : 118.0) Encodes a protein with glucosyltransferase activity with high sequence homology to UGT1 (AT1G05560). It belongs to an UGT subfamily that binds UDP-glucose but not UDP-glucuronate, UDP-galactose, or UDP-rhamnose as the glycosyl donor. UGT2 was shown to be able to use abscisic acid as glycosylation substrate in the presence of UDP-glucose.; UDP-glucosyl transferase 75B2 (UGT75B2); FUNCTIONS IN: UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: sperm cell, root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 75B1 (TAIR:AT1G05560.1); Has 7198 Blast hits to 7135 proteins in 463 species: Archae - 0; Bacteria - 427; Metazoa - 1573; Fungi - 32; Plants - 5007; Viruses - 111; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative 5GT, Description = Glycosyltransferase, PFAM = )' T '17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf04099_842421-848153' '(at5g54140 : 540.0) encodes a protein similar to IAA amino acid conjugate hydrolase; IAA-leucine-resistant (ILR1)-like 3 (ILL3); FUNCTIONS IN: metallopeptidase activity, IAA-amino acid conjugate hydrolase activity; INVOLVED IN: proteolysis, auxin metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439); BEST Arabidopsis thaliana protein match is: peptidase M20/M25/M40 family protein (TAIR:AT1G51760.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|31662 : 389.0) no description available & (reliability: 1080.0) & (original description: Putative ILL3, Description = IAA-amino acid hydrolase ILR1-like 3, PFAM = PF07687;PF01546)' T '17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf04205_144279-149462' '(at5g55250 : 592.0) Encodes an enzyme which specifically converts IAA to its methyl ester form MelIAA. This gene belongs to the family of carboxyl methyltransferases whose members catalyze the transfer of the methyl group from S-adenosyl-L-methionine to carboxylic acid-containing substrates to form small molecule methyl esters. Expression of TCP genes is downregulated in mutant iamt1-D.; IAA carboxylmethyltransferase 1 (IAMT1); CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: gibberellic acid methyltransferase 2 (TAIR:AT5G56300.1); Has 921 Blast hits to 905 proteins in 124 species: Archae - 0; Bacteria - 69; Metazoa - 9; Fungi - 5; Plants - 719; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (gnl|cdd|86349 : 358.0) no description available & (q9fyz9|bamt_antma : 190.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 1184.0) & (original description: Putative IAMT1, Description = Indole-3-acetate O-methyltransferase 1, PFAM = PF03492)' T '17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf05080_201541-207982' '(at5g55250 : 593.0) Encodes an enzyme which specifically converts IAA to its methyl ester form MelIAA. This gene belongs to the family of carboxyl methyltransferases whose members catalyze the transfer of the methyl group from S-adenosyl-L-methionine to carboxylic acid-containing substrates to form small molecule methyl esters. Expression of TCP genes is downregulated in mutant iamt1-D.; IAA carboxylmethyltransferase 1 (IAMT1); CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: gibberellic acid methyltransferase 2 (TAIR:AT5G56300.1); Has 921 Blast hits to 905 proteins in 124 species: Archae - 0; Bacteria - 69; Metazoa - 9; Fungi - 5; Plants - 719; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (gnl|cdd|86349 : 358.0) no description available & (q9fyz9|bamt_antma : 190.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 1186.0) & (original description: Putative IAMT1, Description = Indole-3-acetate O-methyltransferase 1, PFAM = PF03492)' T '17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf08333_242573-251927' '(at1g44350 : 563.0) encodes a protein similar to IAA amino acid conjugate hydrolase.; IAA-leucine resistant (ILR)-like gene 6 (ILL6); FUNCTIONS IN: metallopeptidase activity, IAA-amino acid conjugate hydrolase activity; INVOLVED IN: proteolysis, regulation of systemic acquired resistance, auxin metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20D, amidohydrolase (InterPro:IPR010168), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439), Peptidase M20, dimerisation (InterPro:IPR011650); BEST Arabidopsis thaliana protein match is: peptidase M20/M25/M40 family protein (TAIR:AT1G51760.1); Has 12322 Blast hits to 12314 proteins in 1908 species: Archae - 129; Bacteria - 9070; Metazoa - 89; Fungi - 234; Plants - 310; Viruses - 0; Other Eukaryotes - 2490 (source: NCBI BLink). & (gnl|cdd|31662 : 385.0) no description available & (reliability: 1126.0) & (original description: Putative ILL6, Description = IAA-amino acid hydrolase ILR1-like 6, PFAM = PF01546;PF07687)' T '17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf08390_366471-382304' '(at3g02875 : 493.0) Hydrolyzes amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA), including IAA-Leu and IAA-Phe. Uses Mg and Co ions as cofactors.; IAA-LEUCINE RESISTANT 1 (ILR1); FUNCTIONS IN: metallopeptidase activity, IAA-Leu conjugate hydrolase activity, IAA-Phe conjugate hydrolase activity; INVOLVED IN: proteolysis, auxin metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439); BEST Arabidopsis thaliana protein match is: IAA-leucine resistant (ILR)-like 2 (TAIR:AT5G56660.1); Has 13461 Blast hits to 13451 proteins in 1948 species: Archae - 137; Bacteria - 10103; Metazoa - 64; Fungi - 266; Plants - 279; Viruses - 0; Other Eukaryotes - 2612 (source: NCBI BLink). & (gnl|cdd|31662 : 388.0) no description available & (reliability: 986.0) & (original description: Putative ILR1, Description = IAA-amino acid hydrolase ILR1, PFAM = PF01546;PF07687)' T '17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf09161_190979-201901' '(q42965|nrl4_tobac : 198.0) Nitrilase 4 (EC 3.5.5.1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36023 : 195.0) no description available & (at5g22300 : 186.0) encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway.; nitrilase 4 (NIT4); CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), Nitrilase/cyanide hydratase, conserved site (InterPro:IPR000132); BEST Arabidopsis thaliana protein match is: nitrilase 3 (TAIR:AT3G44320.1); Has 7653 Blast hits to 7575 proteins in 1747 species: Archae - 162; Bacteria - 5078; Metazoa - 407; Fungi - 539; Plants - 330; Viruses - 11; Other Eukaryotes - 1126 (source: NCBI BLink). & (gnl|cdd|85033 : 103.0) no description available & (reliability: 352.0) & (original description: Putative nIT4, Description = Nitrilase, PFAM = PF00795)' T '17.2.1' 'hormone metabolism.auxin.synthesis-degradation' 'niben101scf20904_111830-125714' '(at1g51760 : 605.0) encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers.; IAA-ALANINE RESISTANT 3 (IAR3); FUNCTIONS IN: metallopeptidase activity, IAA-Ala conjugate hydrolase activity; INVOLVED IN: proteolysis, response to wounding; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168); BEST Arabidopsis thaliana protein match is: IAA-leucine resistant (ILR)-like gene 5 (TAIR:AT1G51780.1); Has 13368 Blast hits to 13360 proteins in 1987 species: Archae - 133; Bacteria - 9793; Metazoa - 95; Fungi - 261; Plants - 323; Viruses - 0; Other Eukaryotes - 2763 (source: NCBI BLink). & (gnl|cdd|31662 : 399.0) no description available & (reliability: 1210.0) & (original description: Putative ILL4, Description = IAA-amino acid hydrolase ILR1-like 4, PFAM = PF07687;PF01546)' T '17.2.1.1001' 'hormone metabolism.auxin.synthesis-degradation' 'beta-indole-3-acetonitrile' 'hormone metabolism.auxin' M '17.2.1.1002' 'hormone metabolism.auxin' 'indole-3-acetaldehyde' 'hormone metabolism.auxin' M '17.2.1.1003' 'hormone metabolism.auxin' 'indole-3-acetate' 'hormone metabolism.auxin' M '17.2.1.1004' 'hormone metabolism.auxin' 'indole-3-acetyl-aspartate' 'hormone metabolism.auxin' M '17.2.1.1005' 'hormone metabolism.auxin' 'indole-3-butyrate' 'hormone metabolism.auxin' M '17.2.1.1006' 'hormone metabolism.auxin' 'indoxyl-beta-d-glucoside' 'hormone metabolism.auxin' M '17.2.1.1007' 'hormone metabolism.auxin' 'n-(3-indolylacetyl)-alanine' '' M '17.2.2' 'hormone metabolism.auxin.signal transduction' 'nbv0.3scaffold7617_14372-29756' '(at2g02560 : 1634.0) Arabidopsis thaliana homolog of human CAND1 (cullin-associated and neddylation-dissociated). Putative similarity to TBP-interacting protein TIP120. Ubiquitously expressed in plant tissues throughout development. T-DNA insertion mutant plants were completely sterile and resistant to sirtinol and auxin, but not to gibberellins or brassinolide. Displayed developmental phenotypes similar to those of axr1, namely, short petioles, downwardly curling leaves, shorter inflorescence. Required for SCF function and appears to modulate SCF complex cycling. Physically interacts with CUL1.; cullin-associated and neddylation dissociated (CAND1); FUNCTIONS IN: binding; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, vegetative to reproductive phase transition of meristem; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), TATA-binding protein interacting (TIP20) (InterPro:IPR013932); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37035 : 1018.0) no description available & (gnl|cdd|72048 : 203.0) no description available & (reliability: 3268.0) & (original description: Putative CAND1, Description = Cullin-associated NEDD8-dissociated protein 1, PFAM = PF08623)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'nbv0.3scaffold14967_21526-29594' '(at3g28970 : 258.0) Identified in a screen for mutants resistant to an anti-auxin. Encodes a protein with unknown function that shares homology with DCN protein family.; antiauxin-resistant 3 (AAR3); CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12760.1); Has 786 Blast hits to 786 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 464; Fungi - 133; Plants - 125; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|38287 : 99.2) no description available & (gnl|cdd|86365 : 94.9) no description available & (reliability: 516.0) & (original description: Putative AAR3, Description = Defective in cullin neddylation protein, PFAM = PF03556)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'nbv0.3scaffold19066_8130-16360' '(at5g35570 : 838.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G37980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66790 : 440.0) no description available & (reliability: 1676.0) & (original description: Putative At5g35570, Description = AT5g35570/K2K18_1, PFAM = PF10250)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'nbv0.3scaffold46642_8435-27609' '(at5g58440 : 545.0) sorting nexin 2A (SNX2a); FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2B (TAIR:AT5G07120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37484 : 209.0) no description available & (gnl|cdd|85027 : 85.1) no description available & (reliability: 1086.0) & (original description: Putative SNX2B, Description = Sorting nexin 2B, PFAM = PF09325;PF00787)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'nbv0.3scaffold51421_2897-7660' '(at5g16530 : 295.0) Encodes PIN5, an atypical member of the PIN family. PIN5 is a functional auxin transporter that is required for auxin-mediated development. PIN5 does not have a direct role in cell-to-cell transport but regulates intracellular auxin homeostasis and metabolism. PIN5 localizes, unlike other characterized plasma membrane PIN proteins, to endoplasmic reticulum (ER), presumably mediating auxin flow from the cytosol to the lumen of the ER.; PIN-FORMED 5 (PIN5); CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT5G15100.1); Has 2169 Blast hits to 1907 proteins in 543 species: Archae - 24; Bacteria - 1096; Metazoa - 104; Fungi - 0; Plants - 651; Viruses - 0; Other Eukaryotes - 294 (source: NCBI BLink). & (q5jlm1|pin6_orysa : 257.0) Probable auxin efflux carrier component 6 (OsPIN6) - Oryza sativa (Rice) & (gnl|cdd|86363 : 178.0) no description available & (reliability: 590.0) & (original description: Putative pin1, Description = PIN-like protein, PFAM = PF03547;PF03547)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'nbv0.3scaffold57335_2243-11640' '(at1g68370 : 284.0) DnaJ-like protein with homology to coiled coils found in cytoskeleton-interacting proteins.; ALTERED RESPONSE TO GRAVITY 1 (ARG1); CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: ARG1-like 1 (TAIR:AT1G24120.1); Has 24672 Blast hits to 24665 proteins in 3308 species: Archae - 176; Bacteria - 9653; Metazoa - 4287; Fungi - 2463; Plants - 2622; Viruses - 27; Other Eukaryotes - 5444 (source: NCBI BLink). & (gnl|cdd|35932 : 148.0) no description available & (reliability: 568.0) & (original description: Putative ARG1, Description = Chaperone protein dnaJ 15, PFAM = PF00226)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'nbv0.3scaffold61337_2687-8622' '(at3g62980 : 967.0) Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation.; TRANSPORT INHIBITOR RESPONSE 1 (TIR1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: GRR1-like protein 1 (TAIR:AT4G03190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37158 : 172.0) no description available & (reliability: 1934.0) & (original description: Putative TIR1, Description = Protein TRANSPORT INHIBITOR RESPONSE 1, PFAM = PF12937)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'nbv0.5scaffold171_183280-194417' '(at5g07120 : 581.0) Encodes sorting nexin SNX2b. SNX2b is peripherally associated with membranes. Involved in vesicular trafficking from endosomes to the vacuole.; sorting nexin 2B (SNX2b); FUNCTIONS IN: phospholipid binding; INVOLVED IN: vesicle-mediated transport, intracellular signaling pathway; LOCATED IN: membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2A (TAIR:AT5G58440.1); Has 2399 Blast hits to 2386 proteins in 279 species: Archae - 13; Bacteria - 100; Metazoa - 1366; Fungi - 555; Plants - 146; Viruses - 0; Other Eukaryotes - 219 (source: NCBI BLink). & (gnl|cdd|37484 : 212.0) no description available & (gnl|cdd|72740 : 85.7) no description available & (reliability: 1162.0) & (original description: Putative BnaC09g48300D, Description = BnaC09g48300D protein, PFAM = PF09325;PF00787)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'nbv0.5scaffold697_141463-146809' '(at5g16530 : 323.0) Encodes PIN5, an atypical member of the PIN family. PIN5 is a functional auxin transporter that is required for auxin-mediated development. PIN5 does not have a direct role in cell-to-cell transport but regulates intracellular auxin homeostasis and metabolism. PIN5 localizes, unlike other characterized plasma membrane PIN proteins, to endoplasmic reticulum (ER), presumably mediating auxin flow from the cytosol to the lumen of the ER.; PIN-FORMED 5 (PIN5); CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT5G15100.1); Has 2169 Blast hits to 1907 proteins in 543 species: Archae - 24; Bacteria - 1096; Metazoa - 104; Fungi - 0; Plants - 651; Viruses - 0; Other Eukaryotes - 294 (source: NCBI BLink). & (q5jlm1|pin6_orysa : 279.0) Probable auxin efflux carrier component 6 (OsPIN6) - Oryza sativa (Rice) & (gnl|cdd|86363 : 182.0) no description available & (reliability: 646.0) & (original description: Putative PIN5, Description = Auxin efflux carrier component 5, PFAM = PF03547;PF03547)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'nbv0.5scaffold2076_339243-344672' '(at3g62980 : 878.0) Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation.; TRANSPORT INHIBITOR RESPONSE 1 (TIR1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: GRR1-like protein 1 (TAIR:AT4G03190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37158 : 154.0) no description available & (reliability: 1756.0) & (original description: Putative AFB1, Description = TIR1-like protein, PFAM = )' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'nbv0.5scaffold2459_47910-72441' '(at3g02260 : 2212.0) Calossin-like protein required for polar auxin transport; BIG (BIG); FUNCTIONS IN: ubiquitin-protein ligase activity, binding, zinc ion binding; INVOLVED IN: response to auxin stimulus, indeterminate inflorescence morphogenesis, photomorphogenesis, root development, auxin polar transport; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Zinc finger, N-recognin, metazoa (InterPro:IPR013993), Armadillo-type fold (InterPro:IPR016024), Zinc finger, ZZ-type (InterPro:IPR000433), Zinc finger, N-recognin (InterPro:IPR003126); Has 1182 Blast hits to 997 proteins in 123 species: Archae - 0; Bacteria - 4; Metazoa - 768; Fungi - 44; Plants - 189; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). & (gnl|cdd|36987 : 87.5) no description available & (reliability: 4424.0) & (original description: Putative ASA1, Description = Auxin transport protein BIG, PFAM = PF13764;PF13764)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'nbv0.5scaffold4425_80588-85488' '(p33491|abp2_tobac : 369.0) Auxin-binding protein T92 precursor (ABP) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|85846 : 314.0) no description available & (at4g02980 : 267.0) Auxin binding protein involved in cell elongation and cell division. ABP1 is ubiquitinated in vitro and in planta by AtRma2.; endoplasmic reticulum auxin binding protein 1 (ABP1); FUNCTIONS IN: auxin binding; INVOLVED IN: positive regulation of cell division, positive regulation of cell size, unidimensional cell growth, positive regulation of DNA endoreduplication, cytokinesis; LOCATED IN: endomembrane system, endoplasmic reticulum lumen; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin-binding protein (InterPro:IPR000526), Cupin, RmlC-type (InterPro:IPR011051), RmlC-like jelly roll fold (InterPro:IPR014710); Has 186 Blast hits to 186 proteins in 64 species: Archae - 10; Bacteria - 50; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 534.0) & (original description: Putative T85, Description = Auxin-binding protein T85, PFAM = PF02041)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'nbv0.5scaffold8164_3127-15207' '(at1g05180 : 824.0) Encodes a subunit of the RUB1 activating enzyme that regulates the protein degradation activity of Skp1-Cullin-Fbox complexes, primarily, but not exclusively, affecting auxin responses. Acts alongside AS1 to exclude BP expression from leaves.; AUXIN RESISTANT 1 (AXR1); CONTAINS InterPro DOMAIN/s: Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: AXR1-like (TAIR:AT2G32410.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37227 : 658.0) no description available & (gnl|cdd|73272 : 494.0) no description available & (reliability: 1648.0) & (original description: Putative AXR1, Description = NEDD8-activating enzyme E1 regulatory subunit AXR1, PFAM = PF00899)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben044scf00000573ctg009_1-5692' '(at5g58440 : 556.0) sorting nexin 2A (SNX2a); FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2B (TAIR:AT5G07120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37484 : 199.0) no description available & (gnl|cdd|85027 : 85.1) no description available & (reliability: 1108.0) & (original description: Putative SNX2B, Description = Sorting nexin 2B, PFAM = PF00787;PF09325)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben044scf00003874ctg000_6416-11425' '(at5g16530 : 333.0) Encodes PIN5, an atypical member of the PIN family. PIN5 is a functional auxin transporter that is required for auxin-mediated development. PIN5 does not have a direct role in cell-to-cell transport but regulates intracellular auxin homeostasis and metabolism. PIN5 localizes, unlike other characterized plasma membrane PIN proteins, to endoplasmic reticulum (ER), presumably mediating auxin flow from the cytosol to the lumen of the ER.; PIN-FORMED 5 (PIN5); CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT5G15100.1); Has 2169 Blast hits to 1907 proteins in 543 species: Archae - 24; Bacteria - 1096; Metazoa - 104; Fungi - 0; Plants - 651; Viruses - 0; Other Eukaryotes - 294 (source: NCBI BLink). & (q5jlm1|pin6_orysa : 284.0) Probable auxin efflux carrier component 6 (OsPIN6) - Oryza sativa (Rice) & (gnl|cdd|86363 : 185.0) no description available & (reliability: 666.0) & (original description: Putative PIN5, Description = Auxin efflux carrier component 5, PFAM = PF03547;PF03547)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben044scf00006496ctg004_7791-12292' '(q67ul3|pin1c_orysa : 760.0) Probable auxin efflux carrier component 1c (OsPIN1c) - Oryza sativa (Rice) & (at1g73590 : 753.0) Encodes an auxin efflux carrier involved in shoot and root development. It is involved in the maintenance of embryonic auxin gradients. Loss of function severely affects organ initiation, pin1 mutants are characterised by an inflorescence meristem that does not initiate any flowers, resulting in the formation of a naked inflorescence stem. PIN1 is involved in the determination of leaf shape by actively promoting development of leaf margin serrations. In roots, the protein mainly resides at the basal end of the vascular cells, but weak signals can be detected in the epidermis and the cortex. Expression levels and polarity of this auxin efflux carrier change during primordium development suggesting that cycles of auxin build-up and depletion accompany, and may direct, different stages of primordium development. PIN1 action on plant development does not strictly require function of PGP1 and PGP19 proteins.; PIN-FORMED 1 (PIN1); FUNCTIONS IN: transporter activity; INVOLVED IN: in 14 processes; LOCATED IN: apical part of cell, plasma membrane, membrane, basal plasma membrane, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G70940.1); Has 5945 Blast hits to 4479 proteins in 806 species: Archae - 51; Bacteria - 3010; Metazoa - 784; Fungi - 134; Plants - 814; Viruses - 35; Other Eukaryotes - 1117 (source: NCBI BLink). & (gnl|cdd|86363 : 168.0) no description available & (reliability: 1506.0) & (original description: Putative pin1, Description = Auxin efflux carrier, PFAM = PF03547)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben044scf00008560ctg001_31194-34002' '(at3g28970 : 120.0) Identified in a screen for mutants resistant to an anti-auxin. Encodes a protein with unknown function that shares homology with DCN protein family.; antiauxin-resistant 3 (AAR3); CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12760.1); Has 786 Blast hits to 786 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 464; Fungi - 133; Plants - 125; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative AAR3, Description = Defective in cullin neddylation protein, PFAM = PF03556)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben044scf00009154ctg001_11165-32666' '(at3g02260 : 5723.0) Calossin-like protein required for polar auxin transport; BIG (BIG); FUNCTIONS IN: ubiquitin-protein ligase activity, binding, zinc ion binding; INVOLVED IN: response to auxin stimulus, indeterminate inflorescence morphogenesis, photomorphogenesis, root development, auxin polar transport; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Zinc finger, N-recognin, metazoa (InterPro:IPR013993), Armadillo-type fold (InterPro:IPR016024), Zinc finger, ZZ-type (InterPro:IPR000433), Zinc finger, N-recognin (InterPro:IPR003126); Has 1182 Blast hits to 997 proteins in 123 species: Archae - 0; Bacteria - 4; Metazoa - 768; Fungi - 44; Plants - 189; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). & (gnl|cdd|36987 : 144.0) no description available & (reliability: 11446.0) & (original description: Putative BIG, Description = Auxin transport protein BIG, PFAM = PF00569;PF13764)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben044scf00009154ctg002_1-1750' '(at3g02260 : 254.0) Calossin-like protein required for polar auxin transport; BIG (BIG); FUNCTIONS IN: ubiquitin-protein ligase activity, binding, zinc ion binding; INVOLVED IN: response to auxin stimulus, indeterminate inflorescence morphogenesis, photomorphogenesis, root development, auxin polar transport; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Zinc finger, N-recognin, metazoa (InterPro:IPR013993), Armadillo-type fold (InterPro:IPR016024), Zinc finger, ZZ-type (InterPro:IPR000433), Zinc finger, N-recognin (InterPro:IPR003126); Has 1182 Blast hits to 997 proteins in 123 species: Archae - 0; Bacteria - 4; Metazoa - 768; Fungi - 44; Plants - 189; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). & (reliability: 508.0) & (original description: Putative ASA1, Description = Auxin transport protein BIG, PFAM = PF13764)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben044scf00013859ctg005_3340-19444' '(at2g02560 : 1858.0) Arabidopsis thaliana homolog of human CAND1 (cullin-associated and neddylation-dissociated). Putative similarity to TBP-interacting protein TIP120. Ubiquitously expressed in plant tissues throughout development. T-DNA insertion mutant plants were completely sterile and resistant to sirtinol and auxin, but not to gibberellins or brassinolide. Displayed developmental phenotypes similar to those of axr1, namely, short petioles, downwardly curling leaves, shorter inflorescence. Required for SCF function and appears to modulate SCF complex cycling. Physically interacts with CUL1.; cullin-associated and neddylation dissociated (CAND1); FUNCTIONS IN: binding; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, vegetative to reproductive phase transition of meristem; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), TATA-binding protein interacting (TIP20) (InterPro:IPR013932); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37035 : 1427.0) no description available & (gnl|cdd|72048 : 203.0) no description available & (reliability: 3716.0) & (original description: Putative CAND1, Description = Cullin-associated NEDD8-dissociated protein 1, PFAM = PF08623)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben044scf00016941ctg008_1-7809' '(at3g28970 : 264.0) Identified in a screen for mutants resistant to an anti-auxin. Encodes a protein with unknown function that shares homology with DCN protein family.; antiauxin-resistant 3 (AAR3); CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12760.1); Has 786 Blast hits to 786 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 464; Fungi - 133; Plants - 125; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|38287 : 98.0) no description available & (gnl|cdd|86365 : 95.7) no description available & (reliability: 528.0) & (original description: Putative AAR3, Description = Defective in cullin neddylation protein, PFAM = PF03556)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben044scf00032054ctg003_16120-20637' '(at1g12820 : 904.0) Auxin receptor involved in primary and lateral root growth inhibition in response to nitrate. Target of miR393. Induced by nitrate in primary roots.; auxin signaling F-box 3 (AFB3); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: auxin signaling F-box 2 (TAIR:AT3G26810.1); Has 2450 Blast hits to 1661 proteins in 170 species: Archae - 0; Bacteria - 4; Metazoa - 823; Fungi - 153; Plants - 1347; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|37158 : 171.0) no description available & (reliability: 1808.0) & (original description: Putative AFB3, Description = Protein AUXIN SIGNALING F-BOX 3, PFAM = )' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf00072_1033272-1039835' '(at5g16530 : 476.0) Encodes PIN5, an atypical member of the PIN family. PIN5 is a functional auxin transporter that is required for auxin-mediated development. PIN5 does not have a direct role in cell-to-cell transport but regulates intracellular auxin homeostasis and metabolism. PIN5 localizes, unlike other characterized plasma membrane PIN proteins, to endoplasmic reticulum (ER), presumably mediating auxin flow from the cytosol to the lumen of the ER.; PIN-FORMED 5 (PIN5); CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT5G15100.1); Has 2169 Blast hits to 1907 proteins in 543 species: Archae - 24; Bacteria - 1096; Metazoa - 104; Fungi - 0; Plants - 651; Viruses - 0; Other Eukaryotes - 294 (source: NCBI BLink). & (q5jlm1|pin6_orysa : 415.0) Probable auxin efflux carrier component 6 (OsPIN6) - Oryza sativa (Rice) & (gnl|cdd|86363 : 196.0) no description available & (reliability: 952.0) & (original description: Putative PIN5, Description = Auxin efflux carrier component 5, PFAM = PF03547)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf00247_631416-634183' '(at3g62980 : 419.0) Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation.; TRANSPORT INHIBITOR RESPONSE 1 (TIR1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: GRR1-like protein 1 (TAIR:AT4G03190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 838.0) & (original description: Putative AFB1, Description = TIR1-like protein, PFAM = )' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf00307_368993-397444' '(at1g68370 : 614.0) DnaJ-like protein with homology to coiled coils found in cytoskeleton-interacting proteins.; ALTERED RESPONSE TO GRAVITY 1 (ARG1); CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: ARG1-like 1 (TAIR:AT1G24120.1); Has 24672 Blast hits to 24665 proteins in 3308 species: Archae - 176; Bacteria - 9653; Metazoa - 4287; Fungi - 2463; Plants - 2622; Viruses - 27; Other Eukaryotes - 5444 (source: NCBI BLink). & (gnl|cdd|35932 : 313.0) no description available & (gnl|cdd|30832 : 113.0) no description available & (reliability: 1228.0) & (original description: Putative ATJ15, Description = Chaperone protein dnaJ 15, PFAM = PF00226)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf00401_45248-64452' '(at5g58440 : 569.0) sorting nexin 2A (SNX2a); FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2B (TAIR:AT5G07120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37484 : 217.0) no description available & (gnl|cdd|85027 : 84.3) no description available & (reliability: 1126.0) & (original description: Putative SNX2B, Description = Sorting nexin 2B, PFAM = PF00787;PF09325)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf00505_452037-477106' '(at1g77110 : 635.0) Rate-limiting factor in saturable efflux of auxins. PINs are directly involved of in catalyzing cellular auxin efflux.; PIN-FORMED 6 (PIN6); FUNCTIONS IN: auxin:hydrogen symporter activity, transporter activity; INVOLVED IN: auxin polar transport; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT2G01420.1); Has 1564 Blast hits to 1346 proteins in 434 species: Archae - 34; Bacteria - 892; Metazoa - 10; Fungi - 0; Plants - 502; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (q67ul3|pin1c_orysa : 285.0) Probable auxin efflux carrier component 1c (OsPIN1c) - Oryza sativa (Rice) & (gnl|cdd|86363 : 151.0) no description available & (reliability: 1270.0) & (original description: Putative PIN6, Description = Auxin efflux carrier component 6, PFAM = PF03547)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf00823_255907-261860' '(at3g62980 : 967.0) Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation.; TRANSPORT INHIBITOR RESPONSE 1 (TIR1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: GRR1-like protein 1 (TAIR:AT4G03190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37158 : 175.0) no description available & (reliability: 1934.0) & (original description: Putative TIR1, Description = Protein TRANSPORT INHIBITOR RESPONSE 1, PFAM = PF12937)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf01101_265614-271484' '(q9fel7|lax2_medtr : 777.0) Auxin transporter-like protein 2 (AUX1-like protein 2) (MtLAX2) - Medicago truncatula (Barrel medic) & (at2g38120 : 756.0) Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning.; AUXIN RESISTANT 1 (AUX1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUXIN RESISTANT 1 (TAIR:AT5G01240.1); Has 1256 Blast hits to 1251 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 283; Plants - 825; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|36517 : 311.0) no description available & (gnl|cdd|85489 : 223.0) no description available & (reliability: 1364.0) & (original description: Putative LAX4, Description = Auxin transporter-like protein 4, PFAM = PF01490)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf01222_88419-93963' '(at1g70940 : 874.0) A regulator of auxin efflux and involved in differential growth. PIN3 is expressed in gravity-sensing tissues, with PIN3 protein accumulating predominantly at the lateral cell surface. PIN3 localizes to the plasma membrane and to vesicles. In roots, PIN3 is expressed without pronounced polarity in tiers two and three of the columella cells, at the basal side of vascular cells, and to the lateral side of pericycle cells of the elongation zone. PIN3 overexpression inhibits root cell growth. Protein phosphorylation plays a role in PIN3 trafficking to the plasma membrane.; PIN-FORMED 3 (PIN3); FUNCTIONS IN: auxin:hydrogen symporter activity, transporter activity; INVOLVED IN: in 8 processes; LOCATED IN: lateral plasma membrane, plasma membrane, vesicle membrane, cell surface; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G23080.1); Has 1983 Blast hits to 1757 proteins in 550 species: Archae - 37; Bacteria - 1198; Metazoa - 14; Fungi - 0; Plants - 487; Viruses - 0; Other Eukaryotes - 247 (source: NCBI BLink). & (q5smq9|pin1_orysa : 697.0) Auxin efflux carrier component 1 (OsPIN1) (Ethylene insensitive root 1 homolog) - Oryza sativa (Rice) & (gnl|cdd|86363 : 181.0) no description available & (reliability: 1748.0) & (original description: Putative PIN3, Description = Auxin efflux carrier component 3, PFAM = PF03547)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf01326_87391-96295' '(at3g28970 : 261.0) Identified in a screen for mutants resistant to an anti-auxin. Encodes a protein with unknown function that shares homology with DCN protein family.; antiauxin-resistant 3 (AAR3); CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12760.1); Has 786 Blast hits to 786 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 464; Fungi - 133; Plants - 125; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|38287 : 99.2) no description available & (gnl|cdd|86365 : 94.9) no description available & (reliability: 522.0) & (original description: Putative AAR3, Description = Defective in cullin neddylation protein, PFAM = PF03556)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf01409_1-5391' '(at5g57090 : 847.0) Encodes an auxin efflux carrier that is similar to bacterial membrane transporters. Root-specific role in the transport of auxin. Acts downstream of CTR1 and ethylene biosynthesis, in the same pathway as EIN2 and AUX1, and independent from EIN3 and EIN5/AIN1 pathway. In the root, the protein localizes apically in epidermal and lateral root cap cells and predominantly basally in cortical cells. Functions may be regulated by phosphorylation status. EIR1 expression is induced by brassinolide treatment in the brassinosteroid-insensitive br1 mutant. Gravistimulation resulted in asymmetric PIN2 distribution, with more protein degraded at the upper side of the gravistimulated root. Protein turnover is affected by the proteasome and by endosomal cycling. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. Membrane sterol composition is essential for the acquisition of PIN2 polarity.; ETHYLENE INSENSITIVE ROOT 1 (EIR1); CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT2G01420.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q651v6|pin2_orysa : 680.0) Probable auxin efflux carrier component 2 (OsPIN2) - Oryza sativa (Rice) & (gnl|cdd|86363 : 173.0) no description available & (reliability: 1694.0) & (original description: Putative PIN2, Description = Auxin efflux carrier component 2, PFAM = PF03547)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf01529_371526-378132' '(at3g62980 : 663.0) Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation.; TRANSPORT INHIBITOR RESPONSE 1 (TIR1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: GRR1-like protein 1 (TAIR:AT4G03190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37158 : 157.0) no description available & (reliability: 1326.0) & (original description: Putative At5g49980, Description = Transport inhibitor response 1-like protein, PFAM = )' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf01777_290543-294363' '(at2g26170 : 734.0) Encodes a protein with similarity to thromboxane-A synthase, member of the CYP711A cytochrome P450 family. MAX1 is a specific repressor of vegetative axillary buds generated by the axillary meristem. Expressed in vascular traces in the rosette stem and axillary buds throughout plant development. Mutants have increased axillary branches. Along with MAX3,4 thought to mediate control of shoot branching via synthesis of a signal molecule which is transported over long distance mediated by MAX2. cDNA supports the existence of the longer transcript predicted for this locus, no cDNA isolated for shorter transcript. MAX1 downregulates 11 genes involved in flavonoid pathway (CHS, CHI, F3H, F3'H, FLS, DFR, ANS, UFGT, RT, AAC and GST).; "cytochrome P450, family 711, subfamily A, polypeptide 1" (CYP711A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: carotenoid biosynthetic process, positive regulation of flavonoid biosynthetic process, regulation of meristem structural organization, secondary shoot formation, auxin polar transport; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 3 (TAIR:AT4G37340.1); Has 33662 Blast hits to 33590 proteins in 1727 species: Archae - 52; Bacteria - 5395; Metazoa - 11559; Fungi - 6944; Plants - 8228; Viruses - 3; Other Eukaryotes - 1481 (source: NCBI BLink). & (gnl|cdd|35380 : 350.0) no description available & (gnl|cdd|84486 : 251.0) no description available & (o81973|c93a3_soybn : 108.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (reliability: 1468.0) & (original description: Putative max1, Description = Cytochrome p450 family CYP711A member, PFAM = PF00067)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf02508_676444-684316' '(at5g55540 : 1801.0) Encodes a large plant-specific protein of unknown function, with conserved domains also found in a variety of signaling proteins, In trn mutants, the leaf venation network had a severely reduced complexity: incomplete loops, no tertiary or quaternary veins, and vascular islands. The leaf laminas were asymmetric and narrow because of a severely reduced cell number. TRN1 is required for the maintenance of both the radial pattern of tissue differentiation in the root and for the subsequent circumferential pattern within the epidermis. Double mutant analysis showed that TRN1 and TRN2 act in the same pathway.; TORNADO 1 (TRN1); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT1G10510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39509 : 96.7) no description available & (reliability: 3602.0) & (original description: Putative TRN1, Description = Protein TORNADO 1, PFAM = PF13516;PF13516;PF16095;PF08477)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf02543_319022-342629' '(at1g05180 : 841.0) Encodes a subunit of the RUB1 activating enzyme that regulates the protein degradation activity of Skp1-Cullin-Fbox complexes, primarily, but not exclusively, affecting auxin responses. Acts alongside AS1 to exclude BP expression from leaves.; AUXIN RESISTANT 1 (AXR1); CONTAINS InterPro DOMAIN/s: Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: AXR1-like (TAIR:AT2G32410.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37227 : 684.0) no description available & (gnl|cdd|73272 : 512.0) no description available & (reliability: 1682.0) & (original description: Putative AXR1, Description = NEDD8-activating enzyme E1 regulatory subunit AXR1, PFAM = PF00899)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf02658_202562-215982' '(at2g21050 : 793.0) Encodes LAX2 (LIKE AUXIN RESISTANT), a member of the AUX1 LAX family of auxin influx carriers. Required for the establishment of embryonic root cell organization.; like AUXIN RESISTANT 2 (LAX2); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUX1 3 (TAIR:AT1G77690.1); Has 1017 Blast hits to 1012 proteins in 134 species: Archae - 0; Bacteria - 2; Metazoa - 94; Fungi - 224; Plants - 668; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (q8l883|lax5_medtr : 793.0) Auxin transporter-like protein 5 (AUX1-like protein 5) (MtLAX5) - Medicago truncatula (Barrel medic) & (gnl|cdd|36517 : 297.0) no description available & (gnl|cdd|85489 : 200.0) no description available & (reliability: 1472.0) & (original description: Putative LAX5, Description = Auxin transporter-like protein 5, PFAM = PF01490)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf04292_33234-53558' '(at5g58440 : 581.0) sorting nexin 2A (SNX2a); FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2B (TAIR:AT5G07120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37484 : 210.0) no description available & (gnl|cdd|72740 : 84.9) no description available & (reliability: 1156.0) & (original description: Putative SNX2A, Description = Sorting nexin 2A, PFAM = PF00787;PF09325)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf05731_93-9891' '(at1g68370 : 605.0) DnaJ-like protein with homology to coiled coils found in cytoskeleton-interacting proteins.; ALTERED RESPONSE TO GRAVITY 1 (ARG1); CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: ARG1-like 1 (TAIR:AT1G24120.1); Has 24672 Blast hits to 24665 proteins in 3308 species: Archae - 176; Bacteria - 9653; Metazoa - 4287; Fungi - 2463; Plants - 2622; Viruses - 27; Other Eukaryotes - 5444 (source: NCBI BLink). & (gnl|cdd|35932 : 311.0) no description available & (gnl|cdd|30832 : 113.0) no description available & (reliability: 1210.0) & (original description: Putative ATJ15, Description = Chaperone protein dnaJ 15, PFAM = PF00226)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf06090_321685-326635' '(at1g70940 : 842.0) A regulator of auxin efflux and involved in differential growth. PIN3 is expressed in gravity-sensing tissues, with PIN3 protein accumulating predominantly at the lateral cell surface. PIN3 localizes to the plasma membrane and to vesicles. In roots, PIN3 is expressed without pronounced polarity in tiers two and three of the columella cells, at the basal side of vascular cells, and to the lateral side of pericycle cells of the elongation zone. PIN3 overexpression inhibits root cell growth. Protein phosphorylation plays a role in PIN3 trafficking to the plasma membrane.; PIN-FORMED 3 (PIN3); FUNCTIONS IN: auxin:hydrogen symporter activity, transporter activity; INVOLVED IN: in 8 processes; LOCATED IN: lateral plasma membrane, plasma membrane, vesicle membrane, cell surface; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G23080.1); Has 1983 Blast hits to 1757 proteins in 550 species: Archae - 37; Bacteria - 1198; Metazoa - 14; Fungi - 0; Plants - 487; Viruses - 0; Other Eukaryotes - 247 (source: NCBI BLink). & (q67ul3|pin1c_orysa : 699.0) Probable auxin efflux carrier component 1c (OsPIN1c) - Oryza sativa (Rice) & (gnl|cdd|86363 : 174.0) no description available & (reliability: 1684.0) & (original description: Putative PIN3, Description = Auxin efflux carrier component 3, PFAM = PF03547)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf06172_22852-26906' '(at5g15100 : 345.0) PIN-FORMED 8 (PIN8); FUNCTIONS IN: auxin:hydrogen symporter activity, transporter activity; INVOLVED IN: auxin polar transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT5G16530.1); Has 2836 Blast hits to 2583 proteins in 784 species: Archae - 43; Bacteria - 1603; Metazoa - 103; Fungi - 0; Plants - 634; Viruses - 0; Other Eukaryotes - 453 (source: NCBI BLink). & (q5jlm1|pin6_orysa : 245.0) Probable auxin efflux carrier component 6 (OsPIN6) - Oryza sativa (Rice) & (gnl|cdd|86363 : 193.0) no description available & (reliability: 690.0) & (original description: Putative PIN8, Description = Auxin efflux carrier component 8, PFAM = PF03547)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf06560_286582-312674' '(at3g02260 : 2217.0) Calossin-like protein required for polar auxin transport; BIG (BIG); FUNCTIONS IN: ubiquitin-protein ligase activity, binding, zinc ion binding; INVOLVED IN: response to auxin stimulus, indeterminate inflorescence morphogenesis, photomorphogenesis, root development, auxin polar transport; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Zinc finger, N-recognin, metazoa (InterPro:IPR013993), Armadillo-type fold (InterPro:IPR016024), Zinc finger, ZZ-type (InterPro:IPR000433), Zinc finger, N-recognin (InterPro:IPR003126); Has 1182 Blast hits to 997 proteins in 123 species: Archae - 0; Bacteria - 4; Metazoa - 768; Fungi - 44; Plants - 189; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). & (gnl|cdd|36987 : 87.5) no description available & (reliability: 4434.0) & (original description: Putative ASA1, Description = Auxin transport protein BIG, PFAM = PF13764;PF13764;PF13764)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf07191_65646-72781' '(q9fel7|lax2_medtr : 761.0) Auxin transporter-like protein 2 (AUX1-like protein 2) (MtLAX2) - Medicago truncatula (Barrel medic) & (at2g38120 : 746.0) Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning.; AUXIN RESISTANT 1 (AUX1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUXIN RESISTANT 1 (TAIR:AT5G01240.1); Has 1256 Blast hits to 1251 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 283; Plants - 825; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|36517 : 296.0) no description available & (gnl|cdd|85489 : 211.0) no description available & (reliability: 1362.0) & (original description: Putative LAX2, Description = Auxin transporter-like protein 2, PFAM = PF01490)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf07400_195398-216469' '(at2g02560 : 1809.0) Arabidopsis thaliana homolog of human CAND1 (cullin-associated and neddylation-dissociated). Putative similarity to TBP-interacting protein TIP120. Ubiquitously expressed in plant tissues throughout development. T-DNA insertion mutant plants were completely sterile and resistant to sirtinol and auxin, but not to gibberellins or brassinolide. Displayed developmental phenotypes similar to those of axr1, namely, short petioles, downwardly curling leaves, shorter inflorescence. Required for SCF function and appears to modulate SCF complex cycling. Physically interacts with CUL1.; cullin-associated and neddylation dissociated (CAND1); FUNCTIONS IN: binding; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, vegetative to reproductive phase transition of meristem; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), TATA-binding protein interacting (TIP20) (InterPro:IPR013932); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37035 : 1413.0) no description available & (gnl|cdd|72048 : 201.0) no description available & (reliability: 3618.0) & (original description: Putative CAND1, Description = Cullin-associated NEDD8-dissociated protein 1, PFAM = PF08623)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf08653_707792-713596' '(at1g73590 : 853.0) Encodes an auxin efflux carrier involved in shoot and root development. It is involved in the maintenance of embryonic auxin gradients. Loss of function severely affects organ initiation, pin1 mutants are characterised by an inflorescence meristem that does not initiate any flowers, resulting in the formation of a naked inflorescence stem. PIN1 is involved in the determination of leaf shape by actively promoting development of leaf margin serrations. In roots, the protein mainly resides at the basal end of the vascular cells, but weak signals can be detected in the epidermis and the cortex. Expression levels and polarity of this auxin efflux carrier change during primordium development suggesting that cycles of auxin build-up and depletion accompany, and may direct, different stages of primordium development. PIN1 action on plant development does not strictly require function of PGP1 and PGP19 proteins.; PIN-FORMED 1 (PIN1); FUNCTIONS IN: transporter activity; INVOLVED IN: in 14 processes; LOCATED IN: apical part of cell, plasma membrane, membrane, basal plasma membrane, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G70940.1); Has 5945 Blast hits to 4479 proteins in 806 species: Archae - 51; Bacteria - 3010; Metazoa - 784; Fungi - 134; Plants - 814; Viruses - 35; Other Eukaryotes - 1117 (source: NCBI BLink). & (q5smq9|pin1_orysa : 838.0) Auxin efflux carrier component 1 (OsPIN1) (Ethylene insensitive root 1 homolog) - Oryza sativa (Rice) & (gnl|cdd|86363 : 181.0) no description available & (reliability: 1706.0) & (original description: Putative pin1, Description = Auxin efflux carrier, PFAM = PF03547)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf10031_422071-426866' '(q67ul3|pin1c_orysa : 759.0) Probable auxin efflux carrier component 1c (OsPIN1c) - Oryza sativa (Rice) & (at1g73590 : 755.0) Encodes an auxin efflux carrier involved in shoot and root development. It is involved in the maintenance of embryonic auxin gradients. Loss of function severely affects organ initiation, pin1 mutants are characterised by an inflorescence meristem that does not initiate any flowers, resulting in the formation of a naked inflorescence stem. PIN1 is involved in the determination of leaf shape by actively promoting development of leaf margin serrations. In roots, the protein mainly resides at the basal end of the vascular cells, but weak signals can be detected in the epidermis and the cortex. Expression levels and polarity of this auxin efflux carrier change during primordium development suggesting that cycles of auxin build-up and depletion accompany, and may direct, different stages of primordium development. PIN1 action on plant development does not strictly require function of PGP1 and PGP19 proteins.; PIN-FORMED 1 (PIN1); FUNCTIONS IN: transporter activity; INVOLVED IN: in 14 processes; LOCATED IN: apical part of cell, plasma membrane, membrane, basal plasma membrane, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G70940.1); Has 5945 Blast hits to 4479 proteins in 806 species: Archae - 51; Bacteria - 3010; Metazoa - 784; Fungi - 134; Plants - 814; Viruses - 35; Other Eukaryotes - 1117 (source: NCBI BLink). & (gnl|cdd|86363 : 168.0) no description available & (reliability: 1510.0) & (original description: Putative PIN1B, Description = Probable auxin efflux carrier component 1b, PFAM = PF03547)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf10152_430822-442196' '(at5g58440 : 610.0) sorting nexin 2A (SNX2a); FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2B (TAIR:AT5G07120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37484 : 227.0) no description available & (gnl|cdd|72740 : 92.2) no description available & (reliability: 1218.0) & (original description: Putative SNX2B, Description = Sorting nexin 2B, PFAM = PF09325;PF00787)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf10628_104228-109840' '(at1g12820 : 888.0) Auxin receptor involved in primary and lateral root growth inhibition in response to nitrate. Target of miR393. Induced by nitrate in primary roots.; auxin signaling F-box 3 (AFB3); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: auxin signaling F-box 2 (TAIR:AT3G26810.1); Has 2450 Blast hits to 1661 proteins in 170 species: Archae - 0; Bacteria - 4; Metazoa - 823; Fungi - 153; Plants - 1347; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|37158 : 167.0) no description available & (reliability: 1776.0) & (original description: Putative AFB3, Description = Protein AUXIN SIGNALING F-BOX 3, PFAM = )' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf11741_10047-15987' '(at5g57090 : 822.0) Encodes an auxin efflux carrier that is similar to bacterial membrane transporters. Root-specific role in the transport of auxin. Acts downstream of CTR1 and ethylene biosynthesis, in the same pathway as EIN2 and AUX1, and independent from EIN3 and EIN5/AIN1 pathway. In the root, the protein localizes apically in epidermal and lateral root cap cells and predominantly basally in cortical cells. Functions may be regulated by phosphorylation status. EIR1 expression is induced by brassinolide treatment in the brassinosteroid-insensitive br1 mutant. Gravistimulation resulted in asymmetric PIN2 distribution, with more protein degraded at the upper side of the gravistimulated root. Protein turnover is affected by the proteasome and by endosomal cycling. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. Membrane sterol composition is essential for the acquisition of PIN2 polarity.; ETHYLENE INSENSITIVE ROOT 1 (EIR1); CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT2G01420.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q651v6|pin2_orysa : 735.0) Probable auxin efflux carrier component 2 (OsPIN2) - Oryza sativa (Rice) & (gnl|cdd|86363 : 171.0) no description available & (reliability: 1644.0) & (original description: Putative PIN2, Description = Auxin efflux carrier component 2, PFAM = PF03547)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf13966_48356-53263' '(q67ul3|pin1c_orysa : 642.0) Probable auxin efflux carrier component 1c (OsPIN1c) - Oryza sativa (Rice) & (at1g73590 : 625.0) Encodes an auxin efflux carrier involved in shoot and root development. It is involved in the maintenance of embryonic auxin gradients. Loss of function severely affects organ initiation, pin1 mutants are characterised by an inflorescence meristem that does not initiate any flowers, resulting in the formation of a naked inflorescence stem. PIN1 is involved in the determination of leaf shape by actively promoting development of leaf margin serrations. In roots, the protein mainly resides at the basal end of the vascular cells, but weak signals can be detected in the epidermis and the cortex. Expression levels and polarity of this auxin efflux carrier change during primordium development suggesting that cycles of auxin build-up and depletion accompany, and may direct, different stages of primordium development. PIN1 action on plant development does not strictly require function of PGP1 and PGP19 proteins.; PIN-FORMED 1 (PIN1); FUNCTIONS IN: transporter activity; INVOLVED IN: in 14 processes; LOCATED IN: apical part of cell, plasma membrane, membrane, basal plasma membrane, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G70940.1); Has 5945 Blast hits to 4479 proteins in 806 species: Archae - 51; Bacteria - 3010; Metazoa - 784; Fungi - 134; Plants - 814; Viruses - 35; Other Eukaryotes - 1117 (source: NCBI BLink). & (gnl|cdd|86363 : 171.0) no description available & (reliability: 1250.0) & (original description: Putative pin3, Description = Putative plasma membrane intrinsic protein, PFAM = PF03547;PF03547)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf29588_46149-61010' '(at5g35570 : 835.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G37980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66790 : 440.0) no description available & (reliability: 1670.0) & (original description: Putative At5g35570, Description = AT5g35570/K2K18_1, PFAM = PF10250)' T '17.2.2' 'hormone metabolism.auxin.signal transduction' 'niben101scf33211_15874-22575' '(q9fel6|lax3_medtr : 775.0) Auxin transporter-like protein 3 (AUX1-like protein 3) (MtLAX3) - Medicago truncatula (Barrel medic) & (at1g77690 : 770.0) Encodes an auxin influx carrier LAX3 (Like Aux1) that promotes lateral root emergence. Auxin-induced expression of LAX3 in turn induces a selection of cell-wall-remodelling enzymes, which are likely to promote cell separation in advance of developing lateral root primordia.; like AUX1 3 (LAX3); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUXIN RESISTANT 2 (TAIR:AT2G21050.1); Has 1212 Blast hits to 1207 proteins in 154 species: Archae - 0; Bacteria - 0; Metazoa - 167; Fungi - 294; Plants - 716; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|36517 : 298.0) no description available & (gnl|cdd|85489 : 200.0) no description available & (reliability: 1540.0) & (original description: Putative LAX3, Description = Auxin transporter-like protein 3, PFAM = PF01490)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold1129_89573-92058' '(at3g60690 : 130.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G45210.1); Has 1342 Blast hits to 1328 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1341; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 103.0) no description available & (reliability: 260.0) & (original description: Putative RAG1, Description = Auxin responsive SAUR protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold1360_11197-13484' '(gnl|cdd|66231 : 113.0) no description available & (at4g38840 : 105.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p33080|ax10a_soybn : 100.0) Auxin-induced protein X10A - Glycine max (Soybean) & (reliability: 210.0) & (original description: Putative SAUR, Description = Auxin responsive SAUR protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold1360_13486-15773' '(gnl|cdd|66231 : 112.0) no description available & (at5g18080 : 107.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G18020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p33079|a10a5_soybn : 99.8) Auxin-induced protein 10A5 - Glycine max (Soybean) & (reliability: 214.0) & (original description: Putative BnaC01g03640D, Description = BnaC01g03640D protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold3389_32641-34712' '(p33081|ax15a_soybn : 116.0) Auxin-induced protein 15A - Glycine max (Soybean) & (at4g38840 : 112.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 110.0) no description available & (reliability: 224.0) & (original description: Putative upa1, Description = Putative auxin-induced SAUR-like protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold6637_9525-17700' '(at1g19220 : 683.0) Encodes an auxin response factor that contains the conserved VP1-B3 DNA-binding domain at its N-terminus and the Aux/IAA-like domains III and IV present in most ARFs at its C-terminus. The protein interacts with IAA1 (yeast two hybrid) and other auxin response elements such as ER7 and ER9 (yeast one hybrid). ARF19 protein can complement many aspects of the arf7 mutant phenotype and , together with ARF7, is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin.; auxin response factor 19 (ARF19); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related (TAIR:AT5G20730.2); Has 61717 Blast hits to 31683 proteins in 1304 species: Archae - 12; Bacteria - 3231; Metazoa - 21055; Fungi - 6588; Plants - 6362; Viruses - 195; Other Eukaryotes - 24274 (source: NCBI BLink). & (gnl|cdd|69996 : 147.0) no description available & (gnl|cdd|38804 : 80.1) no description available & (reliability: 1336.0) & (original description: Putative arf6, Description = Auxin response factor, PFAM = PF02362;PF02309;PF06507)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold7404_28800-48681' '(at4g34760 : 165.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 125.0) no description available & (p33081|ax15a_soybn : 84.0) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 330.0) & (original description: Putative SAUR, Description = SAUR family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold18524_23631-26134' '(at1g29500 : 125.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative SAUR66, Description = Auxin-responsive protein SAUR66, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold19074_365-3042' '(at3g60690 : 118.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G45210.1); Has 1342 Blast hits to 1328 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1341; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 101.0) no description available & (reliability: 236.0) & (original description: Putative SAUR36, Description = Auxin-responsive protein SAUR36, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold20588_14392-19134' '(at5g43830 : 385.0) Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT3G22850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|48483 : 359.0) no description available & (p24805|tsjt1_tobac : 134.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (reliability: 770.0) & (original description: Putative At5g43830, Description = Aluminium induced protein with YGL and LRDR motifs, PFAM = PF12481)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold26253_23495-27877' '(at2g33310 : 175.0) Auxin induced gene, IAA13 (IAA13).; auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 162.0) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (gnl|cdd|66035 : 140.0) no description available & (reliability: 350.0) & (original description: Putative IAA11, Description = Auxin-responsive protein, PFAM = PF02309)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold26559_16439-20016' '(at1g53700 : 517.0) The WAG1 and its homolog, WAG2 each encodes a protein-serine/threonine kinase that are nearly 70% identical to PsPK3 protein. All three together with CsPK3 belong to PsPK3-type kinases. At the N-terminus, all four possess a serine/threonine-rich domain. They are closely related to Arabidopsis kinases PINOID. wag1/wag2 double mutants exhibit a pronounced wavy root phenotype when grown vertically on agar plates (while wild-type plants develop wavy roots only on plates inclined to angles less than 90 degrees), indicating an overlapping role for WAG1 and WAG2 as suppressors of root waving. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons.; WAG 1 (WAG1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G14370.1); Has 97126 Blast hits to 96120 proteins in 2766 species: Archae - 63; Bacteria - 12090; Metazoa - 36361; Fungi - 11348; Plants - 19901; Viruses - 394; Other Eukaryotes - 16969 (source: NCBI BLink). & (gnl|cdd|35830 : 496.0) no description available & (p47997|g11a_orysa : 334.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 236.0) no description available & (reliability: 1034.0) & (original description: Putative WAG2, Description = Serine/threonine-protein kinase WAG2, PFAM = PF00069)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold30992_11187-13621' '(at1g29500 : 111.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative upa5, Description = Auxin-induced SAUR-like protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold42369_15746-18258' '(at3g60690 : 130.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G45210.1); Has 1342 Blast hits to 1328 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1341; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 106.0) no description available & (reliability: 260.0) & (original description: Putative BnaC04g22040D, Description = BnaC04g22040D protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold44113_4779-7847' '(at5g18020 : 119.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G18080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66231 : 106.0) no description available & (p33081|ax15a_soybn : 103.0) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 238.0) & (original description: Putative SAUR19, Description = Auxin-responsive protein SAUR19, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold48023_6534-11459' '(at3g47620 : 123.0) Encodes a transcription factor AtTCP14 that regulates seed germination. AtTCP14 shows elevated expression level just prior to germination. AtTCP14 is predominantly expressed in the vascular tissue of the embryo, and affects gene expression in radicles in a non-cell-autonomous manner.; "TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14" (TCP14); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G58100.1); Has 1158 Blast hits to 1082 proteins in 149 species: Archae - 2; Bacteria - 69; Metazoa - 397; Fungi - 50; Plants - 507; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|67262 : 113.0) no description available & (reliability: 246.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold48037_1-2216' '(at3g25290 : 177.0) Auxin-responsive family protein; INVOLVED IN: multicellular organismal development; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT4G12980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39494 : 122.0) no description available & (gnl|cdd|68111 : 117.0) no description available & (reliability: 354.0) & (original description: Putative PGSC0003DMG400005415, Description = Auxin-induced in root cultures protein 12, putative, PFAM = PF04526)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold48808_1-7913' '(at1g76270 : 691.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G20550.1); Has 844 Blast hits to 841 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 842; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 524.0) no description available & (reliability: 1382.0) & (original description: Putative axi 1, Description = Axi 1 protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold57834_5224-9501' '(p33081|ax15a_soybn : 114.0) Auxin-induced protein 15A - Glycine max (Soybean) & (at4g38840 : 110.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 104.0) no description available & (reliability: 220.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold60379_1-6659' '(at1g76270 : 677.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G20550.1); Has 844 Blast hits to 841 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 842; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 510.0) no description available & (reliability: 1354.0) & (original description: Putative axi 1, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold63758_1481-3735' '(at4g38840 : 115.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p33081|ax15a_soybn : 113.0) Auxin-induced protein 15A - Glycine max (Soybean) & (gnl|cdd|66231 : 107.0) no description available & (reliability: 230.0) & (original description: Putative upa1, Description = Putative auxin-induced SAUR-like protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold77599_1411-7639' '(at1g14020 : 554.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G03280.1); Has 821 Blast hits to 817 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 821; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 388.0) no description available & (reliability: 1108.0) & (original description: Putative BnaA01g33100D, Description = BnaA01g33100D protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold87006_4290-5918' '(at3g02250 : 187.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT5G15740.1); Has 830 Blast hits to 821 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 830; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 114.0) no description available & (reliability: 374.0) & (original description: Putative At2g03280, Description = Peptide-O-fucosyltransferase, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold108888_872-3056' '(at1g14020 : 227.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G03280.1); Has 821 Blast hits to 817 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 821; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 125.0) no description available & (reliability: 454.0) & (original description: Putative At1g22460, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold109047_401-2853' '(at1g29500 : 119.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative upa5, Description = Auxin-induced SAUR-like protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold147918_1-1109' '(at1g29500 : 122.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative SAUR67, Description = Auxin-responsive protein SAUR67, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.3scaffold199667_1-508' '(at1g29500 : 114.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative SAUR68, Description = Auxin-responsive protein SAUR68, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold451_303522-309813' '(at1g20550 : 708.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G76270.1); Has 868 Blast hits to 809 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 868; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 536.0) no description available & (reliability: 1396.0) & (original description: Putative axi 1, Description = Axi 1 protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold500_205898-209370' '(at5g43830 : 340.0) Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT3G22850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|48483 : 316.0) no description available & (p24805|tsjt1_tobac : 111.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (reliability: 680.0) & (original description: Putative AILP1, Description = Stem-specific protein TSJT1, putative, expressed, PFAM = PF12481)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold848_187282-193003' '(at2g33310 : 139.0) Auxin induced gene, IAA13 (IAA13).; auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 123.0) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (gnl|cdd|66035 : 102.0) no description available & (reliability: 278.0) & (original description: Putative IAA10, Description = Auxin-responsive protein, PFAM = PF02309)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold907_77894-153807' '(at5g64600 : 580.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G22460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66790 : 445.0) no description available & (reliability: 1160.0) & (original description: Putative Sb10g007565, Description = Putative uncharacterized protein Sb10g007565, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold967_35006-41999' '(at1g76270 : 684.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G20550.1); Has 844 Blast hits to 841 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 842; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 510.0) no description available & (reliability: 1368.0) & (original description: Putative axi 1, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold1480_258041-279086' '(p33081|ax15a_soybn : 110.0) Auxin-induced protein 15A - Glycine max (Soybean) & (at4g38840 : 107.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 106.0) no description available & (reliability: 214.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold1480_368005-435138' '(gnl|cdd|66231 : 111.0) no description available & (at4g38840 : 109.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p33081|ax15a_soybn : 100.0) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 218.0) & (original description: Putative upa1, Description = Auxin responsive SAUR protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold1749_233143-235487' '(at2g37030 : 122.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT3G53250.1); Has 1122 Blast hits to 1114 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1121; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 85.8) no description available & (reliability: 244.0) & (original description: Putative At2g37030, Description = Auxin-responsive family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold2194_3375-27926' '(at4g24530 : 694.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT5G65470.1); Has 832 Blast hits to 825 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 832; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 458.0) no description available & (reliability: 1354.0) & (original description: Putative At4g24530, Description = At4g24530, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold2963_269221-271496' '(at5g18020 : 114.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G18080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66231 : 109.0) no description available & (p33081|ax15a_soybn : 103.0) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 228.0) & (original description: Putative upa1, Description = Auxin responsive SAUR protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold4059_197814-202934' '(at2g33310 : 222.0) Auxin induced gene, IAA13 (IAA13).; auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 166.0) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (gnl|cdd|66035 : 142.0) no description available & (reliability: 444.0) & (original description: Putative IAA13, Description = Auxin-responsive protein IAA13, PFAM = PF02309)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold4664_63231-66187' '(at5g47530 : 147.0) Auxin-responsive family protein; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT4G17280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68111 : 134.0) no description available & (gnl|cdd|39494 : 85.9) no description available & (reliability: 294.0) & (original description: Putative poni1, Description = Cytochrome b561/ferric reductase transmembrane, PFAM = PF04526)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold5436_68078-74904' '(at1g76270 : 603.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G20550.1); Has 844 Blast hits to 841 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 842; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 504.0) no description available & (reliability: 1206.0) & (original description: Putative axi 1, Description = Peptide-O-fucosyltransferase, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold6696_27349-32163' '(q6i581|gh35_orysa : 823.0) Probable indole-3-acetic acid-amido synthetase GH3.5 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 5) (OsGH3-5) - Oryza sativa (Rice) & (at2g46370 : 818.0) Encodes a jasmonate-amido synthetase that is a member of the GH3 family of proteins. JAR1 catalyzes the formation of a biologically active jasmonyl-isoleucine (JA-Ile) conjugate. JA-Ile promotes the interaction between JAZ1 and COI1 in the jasmonate signaling pathway. JAR1 localizes to the cytoplasm and is also a phytochrome A signaling component. JAR1 is an auxin-induced gene. Loss of function mutants are defective in a variety of responses to jasmonic acid. JAR1 has additional enzymatic activities in vitro, (e.g. the ability to synthesize adenosine 5'-tetraphosphate and other JA conjugates), but there are no data to show whether JAR1 catalyzes many of these reactions in vivo. JAR1 is involved in pathogen defense, sensitivity to ozone, and wound responses.; JASMONATE RESISTANT 1 (JAR1); FUNCTIONS IN: catalytic activity, adenylyltransferase activity, ATP binding, jasmonate-amino synthetase activity; INVOLVED IN: in 13 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G03400.1). & (gnl|cdd|66963 : 687.0) no description available & (reliability: 1636.0) & (original description: Putative DFL2, Description = Indole-3-acetic acid-amido synthetase, PFAM = PF03321)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold7420_38266-42302' '(at3g61750 : 333.0) Cytochrome b561/ferric reductase transmembrane with DOMON related domain; FUNCTIONS IN: dopamine beta-monooxygenase activity; INVOLVED IN: histidine catabolic process; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593), DOMON (InterPro:IPR013050); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane with DOMON related domain (TAIR:AT3G07570.1); Has 634 Blast hits to 633 proteins in 115 species: Archae - 2; Bacteria - 2; Metazoa - 111; Fungi - 103; Plants - 398; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|39494 : 184.0) no description available & (gnl|cdd|47940 : 91.1) no description available & (reliability: 666.0) & (original description: Putative At3g61750, Description = Cytochrome b561 and DOMON domain-containing protein At3g61750, PFAM = PF03188;PF03351)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold7598_2227-13194' '(at2g01480 : 901.0) O-fucosyltransferase family protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G14970.1); Has 836 Blast hits to 825 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 836; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 445.0) no description available & (reliability: 1706.0) & (original description: Putative At2g01480, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'nbv0.5scaffold7951_36185-39323' '(at5g20810 : 147.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: calmodulin binding; INVOLVED IN: response to auxin stimulus; LOCATED IN: peroxisome; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT3G43120.1); Has 1495 Blast hits to 1481 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1494; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 96.5) no description available & (reliability: 294.0) & (original description: Putative ARG7, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00000972ctg011_6715-9002' '(at5g18050 : 106.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G18020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66231 : 105.0) no description available & (p33081|ax15a_soybn : 101.0) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 212.0) & (original description: Putative SAUR23, Description = Auxin-responsive protein SAUR23, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00002997ctg013_529-16069' '(at2g34680 : 1010.0) isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular.; AUXIN-INDUCED IN ROOT CULTURES 9 (AIR9); INVOLVED IN: response to auxin stimulus, lateral root morphogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Outer arm dynein light chain 1 protein (TAIR:AT1G78230.1); Has 5746 Blast hits to 1796 proteins in 310 species: Archae - 0; Bacteria - 1053; Metazoa - 771; Fungi - 422; Plants - 290; Viruses - 42; Other Eukaryotes - 3168 (source: NCBI BLink). & (reliability: 2020.0) & (original description: Putative AIR9, Description = 187-kDa microtubule-associated protein AIR9, PFAM = )' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00004309ctg011_1-4864' '(at3g61750 : 344.0) Cytochrome b561/ferric reductase transmembrane with DOMON related domain; FUNCTIONS IN: dopamine beta-monooxygenase activity; INVOLVED IN: histidine catabolic process; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593), DOMON (InterPro:IPR013050); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane with DOMON related domain (TAIR:AT3G07570.1); Has 634 Blast hits to 633 proteins in 115 species: Archae - 2; Bacteria - 2; Metazoa - 111; Fungi - 103; Plants - 398; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|39494 : 180.0) no description available & (gnl|cdd|47940 : 83.7) no description available & (reliability: 688.0) & (original description: Putative At3g61750, Description = Cytochrome b561 and DOMON domain-containing protein At3g61750, PFAM = PF03188)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00010285ctg014_1-4020' '(q6i581|gh35_orysa : 826.0) Probable indole-3-acetic acid-amido synthetase GH3.5 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 5) (OsGH3-5) - Oryza sativa (Rice) & (at2g46370 : 818.0) Encodes a jasmonate-amido synthetase that is a member of the GH3 family of proteins. JAR1 catalyzes the formation of a biologically active jasmonyl-isoleucine (JA-Ile) conjugate. JA-Ile promotes the interaction between JAZ1 and COI1 in the jasmonate signaling pathway. JAR1 localizes to the cytoplasm and is also a phytochrome A signaling component. JAR1 is an auxin-induced gene. Loss of function mutants are defective in a variety of responses to jasmonic acid. JAR1 has additional enzymatic activities in vitro, (e.g. the ability to synthesize adenosine 5'-tetraphosphate and other JA conjugates), but there are no data to show whether JAR1 catalyzes many of these reactions in vivo. JAR1 is involved in pathogen defense, sensitivity to ozone, and wound responses.; JASMONATE RESISTANT 1 (JAR1); FUNCTIONS IN: catalytic activity, adenylyltransferase activity, ATP binding, jasmonate-amino synthetase activity; INVOLVED IN: in 13 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G03400.1). & (gnl|cdd|66963 : 688.0) no description available & (reliability: 1636.0) & (original description: Putative DFL2, Description = Indole-3-acetic acid-amido synthetase, PFAM = PF03321)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00010285ctg014_97-2896' '(q6i581|gh35_orysa : 283.0) Probable indole-3-acetic acid-amido synthetase GH3.5 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 5) (OsGH3-5) - Oryza sativa (Rice) & (at2g46370 : 277.0) Encodes a jasmonate-amido synthetase that is a member of the GH3 family of proteins. JAR1 catalyzes the formation of a biologically active jasmonyl-isoleucine (JA-Ile) conjugate. JA-Ile promotes the interaction between JAZ1 and COI1 in the jasmonate signaling pathway. JAR1 localizes to the cytoplasm and is also a phytochrome A signaling component. JAR1 is an auxin-induced gene. Loss of function mutants are defective in a variety of responses to jasmonic acid. JAR1 has additional enzymatic activities in vitro, (e.g. the ability to synthesize adenosine 5'-tetraphosphate and other JA conjugates), but there are no data to show whether JAR1 catalyzes many of these reactions in vivo. JAR1 is involved in pathogen defense, sensitivity to ozone, and wound responses.; JASMONATE RESISTANT 1 (JAR1); FUNCTIONS IN: catalytic activity, adenylyltransferase activity, ATP binding, jasmonate-amino synthetase activity; INVOLVED IN: in 13 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G03400.1). & (gnl|cdd|66963 : 234.0) no description available & (reliability: 554.0) & (original description: Putative DFL2, Description = Indole-3-acetic acid-amido synthetase, PFAM = PF03321)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00012460ctg032_17974-22823' '(at2g33310 : 174.0) Auxin induced gene, IAA13 (IAA13).; auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 158.0) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (gnl|cdd|66035 : 135.0) no description available & (reliability: 348.0) & (original description: Putative IAA13, Description = Auxin-responsive protein IAA13, PFAM = PF02309)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00014583ctg000_16238-18573' '(at5g50760 : 98.2) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT3G43120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative PGSC0003DMG400031744, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00019310ctg001_8439-16167' '(at4g24530 : 738.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT5G65470.1); Has 832 Blast hits to 825 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 832; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 475.0) no description available & (reliability: 1430.0) & (original description: Putative At4g24530, Description = At4g24530, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00022777ctg006_2756-5058' '(at4g34760 : 147.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 118.0) no description available & (p33080|ax10a_soybn : 80.9) Auxin-induced protein X10A - Glycine max (Soybean) & (reliability: 294.0) & (original description: Putative SAUR, Description = SAUR family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00031321ctg009_3867-6411' '(at1g29500 : 99.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative upa5, Description = Auxin-induced SAUR-like protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00032027ctg002_5385-12437' '(at2g20120 : 405.0) Encodes an integral membrane protein of unknown function, highly conserved between plants and bacteria; is likely to be involved in a mechanism that negatively regulates the differentiation of vascular tissue in the stem. Mutants display a dramatic increase in vascular tissue development in the stem in place of the interfascicular region that normally separates the vascular bundles.; CONTINUOUS VASCULAR RING (COV1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: stem vascular tissue pattern formation; LOCATED IN: integral to membrane; EXPRESSED IN: stem, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF502 (InterPro:IPR007462); BEST Arabidopsis thaliana protein match is: like COV 1 (TAIR:AT2G20130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86633 : 188.0) no description available & (reliability: 810.0) & (original description: Putative COV1, Description = Protein CONTINUOUS VASCULAR RING 1, PFAM = PF04367)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00035166ctg000_34741-40117' '(at5g47530 : 387.0) Auxin-responsive family protein; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT4G17280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39494 : 275.0) no description available & (gnl|cdd|68111 : 159.0) no description available & (reliability: 774.0) & (original description: Putative poni1, Description = Auxin-induced in root cultures protein 12, PFAM = PF03188;PF04526)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00037185ctg003_1-3143' '(at3g61750 : 340.0) Cytochrome b561/ferric reductase transmembrane with DOMON related domain; FUNCTIONS IN: dopamine beta-monooxygenase activity; INVOLVED IN: histidine catabolic process; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593), DOMON (InterPro:IPR013050); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane with DOMON related domain (TAIR:AT3G07570.1); Has 634 Blast hits to 633 proteins in 115 species: Archae - 2; Bacteria - 2; Metazoa - 111; Fungi - 103; Plants - 398; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|39494 : 189.0) no description available & (gnl|cdd|47940 : 90.7) no description available & (reliability: 680.0) & (original description: Putative At3g61750, Description = Cytochrome b561 and DOMON domain-containing protein At3g61750, PFAM = PF03188;PF03351)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00043717ctg010_779-2348' '(gnl|cdd|66231 : 105.0) no description available & (at4g38840 : 104.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p33081|ax15a_soybn : 100.0) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 208.0) & (original description: Putative upa1, Description = Putative auxin-induced SAUR-like protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00044874ctg005_868-9876' '(at3g26370 : 876.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT4G24530.1); Has 827 Blast hits to 825 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 827; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 419.0) no description available & (reliability: 1752.0) & (original description: Putative At3g26370, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00045720ctg001_3143-6166' '(gnl|cdd|48483 : 284.0) no description available & (at3g22850 : 275.0) Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT5G43830.1); Has 1324 Blast hits to 1324 proteins in 483 species: Archae - 0; Bacteria - 791; Metazoa - 46; Fungi - 0; Plants - 333; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink). & (p24805|tsjt1_tobac : 133.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (reliability: 550.0) & (original description: Putative AILP1, Description = Stem-specific protein TSJT1, putative, expressed, PFAM = PF12481)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00047914ctg000_3099-10132' '(at1g20550 : 669.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G76270.1); Has 868 Blast hits to 809 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 868; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 522.0) no description available & (reliability: 1310.0) & (original description: Putative axi 1, Description = Axi 1 protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00048554ctg000_2131-4571' '(at1g75590 : 158.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G10990.1); Has 1416 Blast hits to 1399 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1415; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 104.0) no description available & (reliability: 316.0) & (original description: Putative SAUR39, Description = SAUR family protein 39, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00048617ctg000_1-1829' '(at1g29500 : 106.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative upa5, Description = SAUR-like auxin-responsive protein family, putative, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00048617ctg000_5711-8264' '(at1g29500 : 129.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative SAUR66, Description = Auxin-responsive protein SAUR66, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00051741ctg001_13830-18035' '(at5g54510 : 1074.0) Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3).; DWARF IN LIGHT 1 (DFL1); FUNCTIONS IN: indole-3-acetic acid amido synthetase activity; INVOLVED IN: auxin homeostasis, response to auxin stimulus, auxin mediated signaling pathway, unidimensional cell growth; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G27260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8lqm5|gh31_orysa : 868.0) Probable indole-3-acetic acid-amido synthetase GH3.1 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 1) (OsGH3-1) - Oryza sativa (Rice) & (gnl|cdd|66963 : 829.0) no description available & (reliability: 2148.0) & (original description: Putative BRU6, Description = Auxin-responsive GH3 family protein, PFAM = PF03321)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00054691ctg004_96-3034' '(at2g46370 : 321.0) Encodes a jasmonate-amido synthetase that is a member of the GH3 family of proteins. JAR1 catalyzes the formation of a biologically active jasmonyl-isoleucine (JA-Ile) conjugate. JA-Ile promotes the interaction between JAZ1 and COI1 in the jasmonate signaling pathway. JAR1 localizes to the cytoplasm and is also a phytochrome A signaling component. JAR1 is an auxin-induced gene. Loss of function mutants are defective in a variety of responses to jasmonic acid. JAR1 has additional enzymatic activities in vitro, (e.g. the ability to synthesize adenosine 5'-tetraphosphate and other JA conjugates), but there are no data to show whether JAR1 catalyzes many of these reactions in vivo. JAR1 is involved in pathogen defense, sensitivity to ozone, and wound responses.; JASMONATE RESISTANT 1 (JAR1); FUNCTIONS IN: catalytic activity, adenylyltransferase activity, ATP binding, jasmonate-amino synthetase activity; INVOLVED IN: in 13 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G03400.1). & (q6i581|gh35_orysa : 299.0) Probable indole-3-acetic acid-amido synthetase GH3.5 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 5) (OsGH3-5) - Oryza sativa (Rice) & (gnl|cdd|66963 : 272.0) no description available & (reliability: 642.0) & (original description: Putative DFL2, Description = Indole-3-acetic acid-amido synthetase, PFAM = PF03321)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00054786ctg001_4533-7325' '(at2g21200 : 100.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G18060.1); Has 1131 Blast hits to 1125 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1130; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 100.0) no description available & (p33081|ax15a_soybn : 89.7) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 200.0) & (original description: Putative SAUR19, Description = Auxin responsive SAUR protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00055090ctg002_1099-3401' '(at4g34760 : 151.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 121.0) no description available & (p33080|ax10a_soybn : 86.7) Auxin-induced protein X10A - Glycine max (Soybean) & (reliability: 302.0) & (original description: Putative SAUR, Description = SAUR family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00058528ctg000_1924-4132' '(at2g36210 : 119.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G34780.1); Has 925 Blast hits to 921 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 924; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative BnaC04g09120D, Description = BnaA05g08090D protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben044scf00061515ctg000_1-2538' '(at5g20820 : 105.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G72430.1); Has 120 Blast hits to 120 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 120; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative si605013h05, Description = SAUR33-auxin-responsive SAUR family member, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101ctg04390_1-620' '(at4g38840 : 103.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p33081|ax15a_soybn : 102.0) Auxin-induced protein 15A - Glycine max (Soybean) & (gnl|cdd|66231 : 90.4) no description available & (reliability: 206.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101ctg08008_1-824' '(at1g29500 : 132.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative upa5, Description = Auxin-induced SAUR-like protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101ctg12790_1-1640' '(at2g36210 : 122.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G34780.1); Has 925 Blast hits to 921 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 924; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 83.4) no description available & (reliability: 244.0) & (original description: Putative At2g36210, Description = Putative uncharacterized protein At2g36210/F2H17.18, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101ctg16047_3238-5871' '(at2g28085 : 97.1) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G34760.1); Has 1265 Blast hits to 1250 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1264; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 86.5) no description available & (reliability: 194.2) & (original description: Putative BnaA07g13610D, Description = BnaA07g13610D protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00047_315503-327286' '(at1g60690 : 468.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60710.1); Has 30326 Blast hits to 30300 proteins in 2568 species: Archae - 659; Bacteria - 20203; Metazoa - 1608; Fungi - 2287; Plants - 1265; Viruses - 0; Other Eukaryotes - 4304 (source: NCBI BLink). & (p40691|a115_tobac : 420.0) Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36788 : 329.0) no description available & (gnl|cdd|31011 : 274.0) no description available & (reliability: 936.0) & (original description: Putative gpr, Description = Aldo/keto reductase, PFAM = PF00248)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00047_342152-345539' '(at1g60690 : 300.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60710.1); Has 30326 Blast hits to 30300 proteins in 2568 species: Archae - 659; Bacteria - 20203; Metazoa - 1608; Fungi - 2287; Plants - 1265; Viruses - 0; Other Eukaryotes - 4304 (source: NCBI BLink). & (p40691|a115_tobac : 251.0) Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36788 : 205.0) no description available & (gnl|cdd|31011 : 164.0) no description available & (reliability: 600.0) & (original description: Putative gpr, Description = Aldo/keto reductase, PFAM = PF00248)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00135_149925-200689' '(at5g18050 : 106.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G18020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66231 : 105.0) no description available & (p33081|ax15a_soybn : 102.0) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 212.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00135_198402-274200' '(at5g18030 : 105.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G18020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p33081|ax15a_soybn : 101.0) Auxin-induced protein 15A - Glycine max (Soybean) & (gnl|cdd|66231 : 101.0) no description available & (reliability: 210.0) & (original description: Putative upa1, Description = Auxin responsive SAUR protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00135_310286-312543' '(p33081|ax15a_soybn : 112.0) Auxin-induced protein 15A - Glycine max (Soybean) & (at4g38840 : 110.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 101.0) no description available & (reliability: 220.0) & (original description: Putative upa1, Description = Auxin responsive SAUR protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00135_338541-340795' '(p33081|ax15a_soybn : 116.0) Auxin-induced protein 15A - Glycine max (Soybean) & (at4g38840 : 109.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 109.0) no description available & (reliability: 218.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00135_354084-356341' '(p33081|ax15a_soybn : 115.0) Auxin-induced protein 15A - Glycine max (Soybean) & (at4g38840 : 112.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 108.0) no description available & (reliability: 224.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00135_378812-381129' '(at1g75580 : 165.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G19830.1); Has 1403 Blast hits to 1386 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1402; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 129.0) no description available & (p33081|ax15a_soybn : 87.0) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 330.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00135_434011-436331' '(at4g34760 : 173.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 134.0) no description available & (p32295|arg7_phaau : 90.5) Indole-3-acetic acid-induced protein ARG7 - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 346.0) & (original description: Putative SAUR, Description = SAUR family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00135_480655-483104' '(at1g75590 : 152.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G10990.1); Has 1416 Blast hits to 1399 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1415; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 97.7) no description available & (reliability: 304.0) & (original description: Putative SAUR39, Description = SAUR family protein 39, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00152_2323372-2325695' '(at4g34760 : 167.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 132.0) no description available & (p32295|arg7_phaau : 89.4) Indole-3-acetic acid-induced protein ARG7 - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 334.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00158_35053-37472' '(at4g34760 : 146.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 117.0) no description available & (p33080|ax10a_soybn : 84.7) Auxin-induced protein X10A - Glycine max (Soybean) & (reliability: 292.0) & (original description: Putative SAUR, Description = SAUR family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00159_663049-666257' '(at2g04850 : 528.0) Auxin-responsive family protein; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT3G25290.2); Has 646 Blast hits to 646 proteins in 111 species: Archae - 0; Bacteria - 4; Metazoa - 94; Fungi - 69; Plants - 456; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|39494 : 257.0) no description available & (gnl|cdd|47940 : 102.0) no description available & (reliability: 1056.0) & (original description: Putative At2g04850, Description = Cytochrome b561 and DOMON domain-containing protein At2g04850, PFAM = PF03188;PF04526)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00270_1440140-1448711' '(at1g60690 : 508.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60710.1); Has 30326 Blast hits to 30300 proteins in 2568 species: Archae - 659; Bacteria - 20203; Metazoa - 1608; Fungi - 2287; Plants - 1265; Viruses - 0; Other Eukaryotes - 4304 (source: NCBI BLink). & (p40691|a115_tobac : 463.0) Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36788 : 360.0) no description available & (gnl|cdd|31011 : 308.0) no description available & (reliability: 1016.0) & (original description: Putative iolS, Description = Aldo/keto reductase, PFAM = PF00248)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00416_80768-88793' '(gnl|cdd|39494 : 171.0) no description available & (at5g35735 : 169.0) Auxin-responsive family protein; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT5G47530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47940 : 94.5) no description available & (reliability: 338.0) & (original description: Putative PGSC0003DMG400008512, Description = Auxin-responsive family protein, putative isoform 2, PFAM = PF03188;PF04526)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00430_87642-103588' '(at1g17350 : 377.0) NADH:ubiquinone oxidoreductase intermediate-associated protein 30; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (InterPro:IPR013857); BEST Arabidopsis thaliana protein match is: NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (TAIR:AT1G72420.1); Has 442 Blast hits to 442 proteins in 172 species: Archae - 0; Bacteria - 91; Metazoa - 109; Fungi - 74; Plants - 102; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|37646 : 219.0) no description available & (gnl|cdd|87565 : 150.0) no description available & (reliability: 754.0) & (original description: Putative At1g17350, Description = Probable complex I intermediate-associated protein 30, PFAM = PF08547)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00470_6327-36250' '(q6i581|gh35_orysa : 822.0) Probable indole-3-acetic acid-amido synthetase GH3.5 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 5) (OsGH3-5) - Oryza sativa (Rice) & (at2g46370 : 812.0) Encodes a jasmonate-amido synthetase that is a member of the GH3 family of proteins. JAR1 catalyzes the formation of a biologically active jasmonyl-isoleucine (JA-Ile) conjugate. JA-Ile promotes the interaction between JAZ1 and COI1 in the jasmonate signaling pathway. JAR1 localizes to the cytoplasm and is also a phytochrome A signaling component. JAR1 is an auxin-induced gene. Loss of function mutants are defective in a variety of responses to jasmonic acid. JAR1 has additional enzymatic activities in vitro, (e.g. the ability to synthesize adenosine 5'-tetraphosphate and other JA conjugates), but there are no data to show whether JAR1 catalyzes many of these reactions in vivo. JAR1 is involved in pathogen defense, sensitivity to ozone, and wound responses.; JASMONATE RESISTANT 1 (JAR1); FUNCTIONS IN: catalytic activity, adenylyltransferase activity, ATP binding, jasmonate-amino synthetase activity; INVOLVED IN: in 13 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G03400.1). & (gnl|cdd|66963 : 687.0) no description available & (reliability: 1624.0) & (original description: Putative DFL2, Description = Indole-3-acetic acid-amido synthetase, PFAM = PF03321)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00470_8253-9870' '(q6i581|gh35_orysa : 280.0) Probable indole-3-acetic acid-amido synthetase GH3.5 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 5) (OsGH3-5) - Oryza sativa (Rice) & (at2g46370 : 275.0) Encodes a jasmonate-amido synthetase that is a member of the GH3 family of proteins. JAR1 catalyzes the formation of a biologically active jasmonyl-isoleucine (JA-Ile) conjugate. JA-Ile promotes the interaction between JAZ1 and COI1 in the jasmonate signaling pathway. JAR1 localizes to the cytoplasm and is also a phytochrome A signaling component. JAR1 is an auxin-induced gene. Loss of function mutants are defective in a variety of responses to jasmonic acid. JAR1 has additional enzymatic activities in vitro, (e.g. the ability to synthesize adenosine 5'-tetraphosphate and other JA conjugates), but there are no data to show whether JAR1 catalyzes many of these reactions in vivo. JAR1 is involved in pathogen defense, sensitivity to ozone, and wound responses.; JASMONATE RESISTANT 1 (JAR1); FUNCTIONS IN: catalytic activity, adenylyltransferase activity, ATP binding, jasmonate-amino synthetase activity; INVOLVED IN: in 13 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G03400.1). & (gnl|cdd|66963 : 233.0) no description available & (reliability: 550.0) & (original description: Putative DFL2, Description = Indole-3-acetic acid-amido synthetase, PFAM = PF03321)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00508_581854-584171' '(at4g34760 : 171.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 123.0) no description available & (p33081|ax15a_soybn : 87.4) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 342.0) & (original description: Putative SAUR12, Description = Auxin-induced protein TGSAUR12, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00527_553118-555603' '(at3g60690 : 128.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G45210.1); Has 1342 Blast hits to 1328 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1341; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 103.0) no description available & (reliability: 256.0) & (original description: Putative RAG1, Description = Auxin-responsive family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00542_237721-240789' '(at5g18020 : 119.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G18080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66231 : 108.0) no description available & (p33081|ax15a_soybn : 103.0) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 238.0) & (original description: Putative SAUR19, Description = Auxin-responsive protein SAUR19, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00578_309783-313919' '(at5g54510 : 886.0) Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3).; DWARF IN LIGHT 1 (DFL1); FUNCTIONS IN: indole-3-acetic acid amido synthetase activity; INVOLVED IN: auxin homeostasis, response to auxin stimulus, auxin mediated signaling pathway, unidimensional cell growth; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G27260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66963 : 757.0) no description available & (q8lqm5|gh31_orysa : 736.0) Probable indole-3-acetic acid-amido synthetase GH3.1 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 1) (OsGH3-1) - Oryza sativa (Rice) & (reliability: 1772.0) & (original description: Putative BRU6, Description = Auxin-responsive GH3 family protein, PFAM = PF03321)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00663_243487-256127' '(at5g47530 : 189.0) Auxin-responsive family protein; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT4G17280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39494 : 150.0) no description available & (gnl|cdd|47940 : 83.4) no description available & (reliability: 378.0) & (original description: Putative PGSC0003DMG400008512, Description = Auxin-responsive family protein, putative isoform 2, PFAM = PF04526)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00805_86051-88997' '(at5g20810 : 164.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: calmodulin binding; INVOLVED IN: response to auxin stimulus; LOCATED IN: peroxisome; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT3G43120.1); Has 1495 Blast hits to 1481 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1494; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 100.0) no description available & (reliability: 328.0) & (original description: Putative SAUR1, Description = Auxin-regulated protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00822_439106-444262' '(at3g54100 : 626.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G37980.1); Has 847 Blast hits to 824 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 847; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 434.0) no description available & (reliability: 1252.0) & (original description: Putative Os12g0190100, Description = Os12g0190100 protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00875_719505-721939' '(at1g29500 : 132.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative SAUR61, Description = Auxin-responsive protein SAUR61, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00875_787204-789611' '(at1g29500 : 128.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative upa5, Description = SAUR-like auxin-responsive protein family, putative, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00876_295732-300298' '(at3g61750 : 340.0) Cytochrome b561/ferric reductase transmembrane with DOMON related domain; FUNCTIONS IN: dopamine beta-monooxygenase activity; INVOLVED IN: histidine catabolic process; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593), DOMON (InterPro:IPR013050); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane with DOMON related domain (TAIR:AT3G07570.1); Has 634 Blast hits to 633 proteins in 115 species: Archae - 2; Bacteria - 2; Metazoa - 111; Fungi - 103; Plants - 398; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|39494 : 184.0) no description available & (gnl|cdd|47940 : 90.7) no description available & (reliability: 680.0) & (original description: Putative At3g61750, Description = Cytochrome b561 and DOMON domain-containing protein At3g61750, PFAM = PF03351;PF03188)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00914_308833-311324' '(at3g43120 : 92.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G20810.1); Has 1460 Blast hits to 1446 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1459; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 84.2) no description available & (reliability: 184.0) & (original description: Putative PGSC0003DMG400020701, Description = Auxin responsive SAUR protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00956_94498-96857' '(at2g28085 : 89.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G34760.1); Has 1265 Blast hits to 1250 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1264; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 83.8) no description available & (reliability: 178.0) & (original description: Putative PGSC0003DMG400007162, Description = SAUR-like auxin-responsive protein family, putative, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00956_94522-97105' '(at2g28085 : 97.1) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G34760.1); Has 1265 Blast hits to 1250 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1264; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 83.4) no description available & (reliability: 194.2) & (original description: Putative BnaA07g13610D, Description = BnaA07g13610D protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf00981_546403-555018' '(at1g19220 : 598.0) Encodes an auxin response factor that contains the conserved VP1-B3 DNA-binding domain at its N-terminus and the Aux/IAA-like domains III and IV present in most ARFs at its C-terminus. The protein interacts with IAA1 (yeast two hybrid) and other auxin response elements such as ER7 and ER9 (yeast one hybrid). ARF19 protein can complement many aspects of the arf7 mutant phenotype and , together with ARF7, is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin.; auxin response factor 19 (ARF19); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related (TAIR:AT5G20730.2); Has 61717 Blast hits to 31683 proteins in 1304 species: Archae - 12; Bacteria - 3231; Metazoa - 21055; Fungi - 6588; Plants - 6362; Viruses - 195; Other Eukaryotes - 24274 (source: NCBI BLink). & (gnl|cdd|69996 : 141.0) no description available & (reliability: 1146.0) & (original description: Putative ARF5, Description = Auxin response factor 5, PFAM = PF02309;PF02362;PF06507)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01008_155693-158857' '(gnl|cdd|69106 : 115.0) no description available & (at1g28330 : 113.0) dormancy-associated protein (DRM1); dormancy-associated protein-like 1 (DYL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to fructose stimulus, response to sucrose stimulus, response to glucose stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dormancyauxin associated (InterPro:IPR008406); BEST Arabidopsis thaliana protein match is: Dormancy/auxin associated family protein (TAIR:AT2G33830.2). & (q05349|12kd_fraan : 102.0) Auxin-repressed 12.5 kDa protein - Fragaria ananassa (Strawberry) & (reliability: 206.0) & (original description: Putative DRMH1, Description = Dormancy-associated protein homolog 1, PFAM = PF05564)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01037_992345-1004561' '(at5g47530 : 402.0) Auxin-responsive family protein; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT4G17280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39494 : 262.0) no description available & (gnl|cdd|68111 : 162.0) no description available & (reliability: 804.0) & (original description: Putative poni1, Description = Auxin-induced in root cultures protein 12, PFAM = PF03188;PF04526)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01061_317742-350729' '(at2g34680 : 2033.0) isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular.; AUXIN-INDUCED IN ROOT CULTURES 9 (AIR9); INVOLVED IN: response to auxin stimulus, lateral root morphogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Outer arm dynein light chain 1 protein (TAIR:AT1G78230.1); Has 5746 Blast hits to 1796 proteins in 310 species: Archae - 0; Bacteria - 1053; Metazoa - 771; Fungi - 422; Plants - 290; Viruses - 42; Other Eukaryotes - 3168 (source: NCBI BLink). & (reliability: 4066.0) & (original description: Putative AIR9, Description = 187-kDa microtubule-associated protein AIR9, PFAM = )' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01076_71655-77456' '(q6i581|gh35_orysa : 839.0) Probable indole-3-acetic acid-amido synthetase GH3.5 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 5) (OsGH3-5) - Oryza sativa (Rice) & (at2g46370 : 817.0) Encodes a jasmonate-amido synthetase that is a member of the GH3 family of proteins. JAR1 catalyzes the formation of a biologically active jasmonyl-isoleucine (JA-Ile) conjugate. JA-Ile promotes the interaction between JAZ1 and COI1 in the jasmonate signaling pathway. JAR1 localizes to the cytoplasm and is also a phytochrome A signaling component. JAR1 is an auxin-induced gene. Loss of function mutants are defective in a variety of responses to jasmonic acid. JAR1 has additional enzymatic activities in vitro, (e.g. the ability to synthesize adenosine 5'-tetraphosphate and other JA conjugates), but there are no data to show whether JAR1 catalyzes many of these reactions in vivo. JAR1 is involved in pathogen defense, sensitivity to ozone, and wound responses.; JASMONATE RESISTANT 1 (JAR1); FUNCTIONS IN: catalytic activity, adenylyltransferase activity, ATP binding, jasmonate-amino synthetase activity; INVOLVED IN: in 13 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G03400.1). & (gnl|cdd|66963 : 691.0) no description available & (reliability: 1634.0) & (original description: Putative BRU6, Description = Indole-3-acetic acid-amido synthetase, PFAM = PF03321)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01192_895553-900746' '(at4g03400 : 833.0) Encodes a GH3-related gene involved in red light-specific hypocotyl elongation. Analysis of sense and antisense transgenic plants suggests that DFL2 is located downstream of red light signal transduction and determines the degree of hypocotyl elongation.; DWARF IN LIGHT 2 (DFL2); INVOLVED IN: response to auxin stimulus, response to light stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT2G46370.4); Has 1425 Blast hits to 1352 proteins in 234 species: Archae - 0; Bacteria - 486; Metazoa - 52; Fungi - 2; Plants - 663; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink). & (gnl|cdd|66963 : 631.0) no description available & (q6i581|gh35_orysa : 602.0) Probable indole-3-acetic acid-amido synthetase GH3.5 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 5) (OsGH3-5) - Oryza sativa (Rice) & (reliability: 1666.0) & (original description: Putative DFL2, Description = Indole-3-acetic acid-amido synthetase, PFAM = PF03321)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01278_628165-630551' '(at3g12830 : 132.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G56150.1); Has 1206 Blast hits to 1201 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1205; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 99.2) no description available & (reliability: 264.0) & (original description: Putative SAUR72, Description = Auxin-responsive protein SAUR72, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01372_1032706-1037658' '(at1g60750 : 269.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60730.1); Has 31420 Blast hits to 31397 proteins in 2613 species: Archae - 665; Bacteria - 20768; Metazoa - 1940; Fungi - 2451; Plants - 1336; Viruses - 0; Other Eukaryotes - 4260 (source: NCBI BLink). & (gnl|cdd|36788 : 245.0) no description available & (p49249|in22_maize : 243.0) IN2-2 protein - Zea mays (Maize) & (gnl|cdd|31011 : 236.0) no description available & (reliability: 538.0) & (original description: Putative yhdN, Description = Aldo/keto reductase, PFAM = PF00248)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01463_108354-111034' '(gnl|cdd|66231 : 97.3) no description available & (at4g31320 : 80.5) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G24400.1); Has 1341 Blast hits to 1332 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1340; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative BnaA01g05940D, Description = BnaA01g05940D protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01524_23605-25943' '(at3g61900 : 94.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G46690.1); Has 1394 Blast hits to 1380 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1393; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 87.3) no description available & (reliability: 188.0) & (original description: Putative SAUR22, Description = Auxin-responsive family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01528_127659-130165' '(at4g12410 : 115.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G22620.1); Has 1137 Blast hits to 1128 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1136; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 101.0) no description available & (reliability: 230.0) & (original description: Putative BnaCnng22170D, Description = BnaCnng22170D protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01528_179635-182120' '(at3g60690 : 127.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G45210.1); Has 1342 Blast hits to 1328 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1341; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 98.9) no description available & (reliability: 254.0) & (original description: Putative SAUR36, Description = Auxin-responsive protein SAUR36, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01546_116231-121285' '(at2g44500 : 688.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G07900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66790 : 445.0) no description available & (reliability: 1272.0) & (original description: Putative At2g44500, Description = Axi 1 protein-like protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01604_32167-37288' '(at5g54510 : 899.0) Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3).; DWARF IN LIGHT 1 (DFL1); FUNCTIONS IN: indole-3-acetic acid amido synthetase activity; INVOLVED IN: auxin homeostasis, response to auxin stimulus, auxin mediated signaling pathway, unidimensional cell growth; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G27260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8lqm5|gh31_orysa : 728.0) Probable indole-3-acetic acid-amido synthetase GH3.1 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 1) (OsGH3-1) - Oryza sativa (Rice) & (gnl|cdd|66963 : 717.0) no description available & (reliability: 1798.0) & (original description: Putative BRU6, Description = Auxin-responsive GH3 family protein, PFAM = PF03321)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01685_750702-755323' '(at5g54510 : 964.0) Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3).; DWARF IN LIGHT 1 (DFL1); FUNCTIONS IN: indole-3-acetic acid amido synthetase activity; INVOLVED IN: auxin homeostasis, response to auxin stimulus, auxin mediated signaling pathway, unidimensional cell growth; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G27260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8lqm5|gh31_orysa : 844.0) Probable indole-3-acetic acid-amido synthetase GH3.1 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 1) (OsGH3-1) - Oryza sativa (Rice) & (gnl|cdd|66963 : 802.0) no description available & (reliability: 1928.0) & (original description: Putative BRU6, Description = Auxin-responsive GH3 family protein, PFAM = PF03321)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01696_716439-723751' '(at1g60680 : 393.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60690.1); Has 31100 Blast hits to 31077 proteins in 2588 species: Archae - 657; Bacteria - 20302; Metazoa - 1863; Fungi - 2395; Plants - 1353; Viruses - 0; Other Eukaryotes - 4530 (source: NCBI BLink). & (p40691|a115_tobac : 349.0) Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36788 : 334.0) no description available & (gnl|cdd|31011 : 311.0) no description available & (reliability: 786.0) & (original description: Putative PR, Description = Perakine reductase, PFAM = PF00248)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01702_588719-591141' '(at1g75590 : 150.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G10990.1); Has 1416 Blast hits to 1399 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1415; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 95.8) no description available & (reliability: 300.0) & (original description: Putative SAUR39, Description = SAUR family protein 39, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01728_206844-209176' '(at3g12830 : 125.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G56150.1); Has 1206 Blast hits to 1201 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1205; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 93.8) no description available & (reliability: 250.0) & (original description: Putative SAUR40, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01765_397994-400428' '(at1g29510 : 110.0) SMALL AUXIN UPREGULATED 68 (SAUR68); CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29500.1); Has 748 Blast hits to 732 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 748; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative SAUR64, Description = Auxin-responsive protein SAUR64, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01765_425705-426980' '(at1g29500 : 134.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative upa5, Description = Auxin-induced SAUR-like protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01765_428898-431428' '(at1g29450 : 125.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29500.1); Has 675 Blast hits to 661 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 675; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative SAUR64, Description = Auxin-responsive protein SAUR64, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01852_252130-254435' '(at4g34770 : 128.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1411 Blast hits to 1394 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1410; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 115.0) no description available & (p32295|arg7_phaau : 109.0) Indole-3-acetic acid-induced protein ARG7 - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 256.0) & (original description: Putative upa1, Description = Putative auxin-induced SAUR-like protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01852_403671-405988' '(at2g21220 : 168.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G38860.1); Has 1403 Blast hits to 1386 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1402; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 123.0) no description available & (p33081|ax15a_soybn : 82.0) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 336.0) & (original description: Putative SAUR, Description = SAUR family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01941_84960-89078' '(at4g27450 : 325.0) Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT3G15450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|48483 : 320.0) no description available & (p24805|tsjt1_tobac : 111.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (reliability: 650.0) & (original description: Putative At4g27450, Description = AT4g27450/F27G19_50, PFAM = PF12481)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01943_814080-819215' '(at5g47530 : 393.0) Auxin-responsive family protein; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT4G17280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39494 : 288.0) no description available & (gnl|cdd|68111 : 170.0) no description available & (reliability: 786.0) & (original description: Putative poni1, Description = Auxin-induced in root cultures protein 12, PFAM = PF04526;PF03188)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01953_3658-6029' '(at4g00880 : 104.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G46690.1); Has 1421 Blast hits to 1407 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1420; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 90.4) no description available & (reliability: 208.0) & (original description: Putative AAM1, Description = Auxin-responsive family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf01980_1343733-1350973' '(at1g22460 : 684.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT5G64600.1); Has 841 Blast hits to 817 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 841; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 477.0) no description available & (reliability: 1368.0) & (original description: Putative At1g22460, Description = At1g22460, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02071_55751-58095' '(at4g00880 : 114.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G46690.1); Has 1421 Blast hits to 1407 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1420; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 100.0) no description available & (reliability: 228.0) & (original description: Putative SAUR59, Description = SAUR59, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02278_10853-17905' '(at2g20120 : 404.0) Encodes an integral membrane protein of unknown function, highly conserved between plants and bacteria; is likely to be involved in a mechanism that negatively regulates the differentiation of vascular tissue in the stem. Mutants display a dramatic increase in vascular tissue development in the stem in place of the interfascicular region that normally separates the vascular bundles.; CONTINUOUS VASCULAR RING (COV1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: stem vascular tissue pattern formation; LOCATED IN: integral to membrane; EXPRESSED IN: stem, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF502 (InterPro:IPR007462); BEST Arabidopsis thaliana protein match is: like COV 1 (TAIR:AT2G20130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86633 : 188.0) no description available & (reliability: 808.0) & (original description: Putative COV1, Description = Protein CONTINUOUS VASCULAR RING 1, PFAM = PF04367)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02289_54114-62639' '(at3g30300 : 806.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G03810.1); Has 982 Blast hits to 802 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 982; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 283.0) no description available & (reliability: 1612.0) & (original description: Putative At3g30300, Description = At3g30300, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02337_45989-49317' '(at3g47620 : 141.0) Encodes a transcription factor AtTCP14 that regulates seed germination. AtTCP14 shows elevated expression level just prior to germination. AtTCP14 is predominantly expressed in the vascular tissue of the embryo, and affects gene expression in radicles in a non-cell-autonomous manner.; "TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14" (TCP14); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G58100.1); Has 1158 Blast hits to 1082 proteins in 149 species: Archae - 2; Bacteria - 69; Metazoa - 397; Fungi - 50; Plants - 507; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|67262 : 114.0) no description available & (reliability: 282.0) & (original description: Putative tic, Description = TCP-domain protein, PFAM = PF03634)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02340_87925-92406' '(gnl|cdd|48483 : 335.0) no description available & (at4g27450 : 327.0) Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT3G15450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p24805|tsjt1_tobac : 113.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (reliability: 654.0) & (original description: Putative AILP1, Description = Stem-specific protein TSJT1, putative, expressed, PFAM = PF12481)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02366_97666-102874' '(at2g18460 : 301.0) like COV 3 (LCV3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF502 (InterPro:IPR007462); BEST Arabidopsis thaliana protein match is: like COV 1 (TAIR:AT2G20130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86633 : 158.0) no description available & (reliability: 566.0) & (original description: Putative COV1, Description = Like-COV protein, PFAM = PF04367)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02367_657452-665056' '(at1g22460 : 671.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT5G64600.1); Has 841 Blast hits to 817 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 841; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 483.0) no description available & (reliability: 1342.0) & (original description: Putative At1g22460, Description = At1g22460, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02367_659747-662963' '(at1g22460 : 347.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT5G64600.1); Has 841 Blast hits to 817 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 841; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 293.0) no description available & (reliability: 694.0) & (original description: Putative At1g22460, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02437_431685-434068' '(at5g20820 : 108.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G72430.1); Has 120 Blast hits to 120 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 120; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative si605013h05, Description = SAUR33-auxin-responsive SAUR family member, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02437_500449-504051' '(at5g20810 : 152.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: calmodulin binding; INVOLVED IN: response to auxin stimulus; LOCATED IN: peroxisome; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT3G43120.1); Has 1495 Blast hits to 1481 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1494; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 99.6) no description available & (reliability: 304.0) & (original description: Putative SAUR1, Description = Auxin-regulated protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02530_935417-946080' '(at1g19220 : 588.0) Encodes an auxin response factor that contains the conserved VP1-B3 DNA-binding domain at its N-terminus and the Aux/IAA-like domains III and IV present in most ARFs at its C-terminus. The protein interacts with IAA1 (yeast two hybrid) and other auxin response elements such as ER7 and ER9 (yeast one hybrid). ARF19 protein can complement many aspects of the arf7 mutant phenotype and , together with ARF7, is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin.; auxin response factor 19 (ARF19); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related (TAIR:AT5G20730.2); Has 61717 Blast hits to 31683 proteins in 1304 species: Archae - 12; Bacteria - 3231; Metazoa - 21055; Fungi - 6588; Plants - 6362; Viruses - 195; Other Eukaryotes - 24274 (source: NCBI BLink). & (gnl|cdd|69996 : 140.0) no description available & (reliability: 1142.0) & (original description: Putative ARF2, Description = Auxin response factor, PFAM = PF02309;PF02362;PF06507)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02632_512011-516856' '(at5g15740 : 742.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G02250.1); Has 822 Blast hits to 815 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 822; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 481.0) no description available & (reliability: 1470.0) & (original description: Putative Os06g0284200, Description = Os06g0284200 protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02658_475162-477449' '(gnl|cdd|66231 : 118.0) no description available & (at2g21210 : 117.0) Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers.; SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G38840.1); Has 1354 Blast hits to 1340 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1353; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p33081|ax15a_soybn : 103.0) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 234.0) & (original description: Putative SAUR19, Description = Auxin-responsive protein SAUR19, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02658_490592-502287' '(at4g38840 : 105.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 103.0) no description available & (p33081|ax15a_soybn : 93.6) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 210.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive protein family, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02658_528928-530700' '(gnl|cdd|66231 : 101.0) no description available & (at4g38840 : 99.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p32295|arg7_phaau : 95.5) Indole-3-acetic acid-induced protein ARG7 - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 198.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02736_649579-659156' '(at3g03810 : 749.0) embryo sac development arrest 30 (EDA30); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, polar nucleus fusion, pollen tube development; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G30300.1); Has 810 Blast hits to 792 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 810; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 341.0) no description available & (reliability: 1498.0) & (original description: Putative EDA30, Description = O-fucosyltransferase-like protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf02864_1069260-1071568' '(at4g34760 : 153.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 124.0) no description available & (p33080|ax10a_soybn : 82.4) Auxin-induced protein X10A - Glycine max (Soybean) & (reliability: 306.0) & (original description: Putative SAUR, Description = SAUR family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf03105_148010-155256' '(at5g65470 : 730.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT4G24530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66790 : 472.0) no description available & (reliability: 1460.0) & (original description: Putative At4g24530, Description = At4g24530, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf03329_19357-24830' '(at2g37980 : 705.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G54100.1); Has 844 Blast hits to 822 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 842; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 466.0) no description available & (reliability: 1410.0) & (original description: Putative PGSC0003DMG400011089, Description = Peptide-O-fucosyltransferase, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf03374_465558-468070' '(at3g60690 : 134.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G45210.1); Has 1342 Blast hits to 1328 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1341; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 106.0) no description available & (reliability: 268.0) & (original description: Putative SAUR36, Description = Auxin-responsive protein SAUR36, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf03488_771176-778169' '(at1g76270 : 671.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G20550.1); Has 844 Blast hits to 841 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 842; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 500.0) no description available & (reliability: 1342.0) & (original description: Putative axi 1, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf03540_66045-74827' '(at1g19220 : 596.0) Encodes an auxin response factor that contains the conserved VP1-B3 DNA-binding domain at its N-terminus and the Aux/IAA-like domains III and IV present in most ARFs at its C-terminus. The protein interacts with IAA1 (yeast two hybrid) and other auxin response elements such as ER7 and ER9 (yeast one hybrid). ARF19 protein can complement many aspects of the arf7 mutant phenotype and , together with ARF7, is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin.; auxin response factor 19 (ARF19); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related (TAIR:AT5G20730.2); Has 61717 Blast hits to 31683 proteins in 1304 species: Archae - 12; Bacteria - 3231; Metazoa - 21055; Fungi - 6588; Plants - 6362; Viruses - 195; Other Eukaryotes - 24274 (source: NCBI BLink). & (gnl|cdd|69996 : 142.0) no description available & (reliability: 1152.0) & (original description: Putative ARF2, Description = Auxin response factor, PFAM = PF02362;PF06507;PF02309)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf03551_158625-163508' '(at5g15740 : 770.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G02250.1); Has 822 Blast hits to 815 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 822; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 490.0) no description available & (reliability: 1508.0) & (original description: Putative Os06g0284200, Description = Os06g0284200 protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf03735_420254-422556' '(at4g34760 : 144.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 125.0) no description available & (p33080|ax10a_soybn : 84.3) Auxin-induced protein X10A - Glycine max (Soybean) & (reliability: 288.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive protein family, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf03764_62485-64805' '(at4g34760 : 175.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 134.0) no description available & (p32295|arg7_phaau : 90.5) Indole-3-acetic acid-induced protein ARG7 - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 350.0) & (original description: Putative SAUR, Description = SAUR family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf03856_202922-205254' '(at3g12830 : 133.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G56150.1); Has 1206 Blast hits to 1201 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1205; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 96.5) no description available & (reliability: 266.0) & (original description: Putative SAUR72, Description = Auxin-responsive protein SAUR72, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04090_41972-46631' '(at2g37030 : 136.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT3G53250.1); Has 1122 Blast hits to 1114 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1121; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 81.9) no description available & (reliability: 272.0) & (original description: Putative BnaC08g24350D, Description = BnaC08g24350D protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04219_82909-85595' '(at2g24400 : 110.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G31320.1); Has 1369 Blast hits to 1358 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1368; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 99.2) no description available & (reliability: 220.0) & (original description: Putative BnaA01g05940D, Description = BnaA01g05940D protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04290_157670-161293' '(at3g47620 : 165.0) Encodes a transcription factor AtTCP14 that regulates seed germination. AtTCP14 shows elevated expression level just prior to germination. AtTCP14 is predominantly expressed in the vascular tissue of the embryo, and affects gene expression in radicles in a non-cell-autonomous manner.; "TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14" (TCP14); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G58100.1); Has 1158 Blast hits to 1082 proteins in 149 species: Archae - 2; Bacteria - 69; Metazoa - 397; Fungi - 50; Plants - 507; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|67262 : 111.0) no description available & (reliability: 330.0) & (original description: Putative tic, Description = TCP-domain protein, PFAM = PF03634)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04334_296428-298821' '(at4g34760 : 145.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 120.0) no description available & (reliability: 290.0) & (original description: Putative SAUR, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04377_309244-312821' '(at1g53700 : 511.0) The WAG1 and its homolog, WAG2 each encodes a protein-serine/threonine kinase that are nearly 70% identical to PsPK3 protein. All three together with CsPK3 belong to PsPK3-type kinases. At the N-terminus, all four possess a serine/threonine-rich domain. They are closely related to Arabidopsis kinases PINOID. wag1/wag2 double mutants exhibit a pronounced wavy root phenotype when grown vertically on agar plates (while wild-type plants develop wavy roots only on plates inclined to angles less than 90 degrees), indicating an overlapping role for WAG1 and WAG2 as suppressors of root waving. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons.; WAG 1 (WAG1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G14370.1); Has 97126 Blast hits to 96120 proteins in 2766 species: Archae - 63; Bacteria - 12090; Metazoa - 36361; Fungi - 11348; Plants - 19901; Viruses - 394; Other Eukaryotes - 16969 (source: NCBI BLink). & (gnl|cdd|35830 : 494.0) no description available & (p47997|g11a_orysa : 335.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 235.0) no description available & (reliability: 1022.0) & (original description: Putative WAG2, Description = Serine/threonine-protein kinase WAG2, PFAM = PF00069)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04392_17176-19673' '(at3g43120 : 88.6) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G20810.1); Has 1460 Blast hits to 1446 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1459; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 81.9) no description available & (reliability: 177.2) & (original description: Putative PGSC0003DMG400020701, Description = Os09g0437400 protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04765_36421-40005' '(gnl|cdd|48483 : 323.0) no description available & (p24805|tsjt1_tobac : 304.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (at4g27450 : 223.0) Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT3G15450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative At3g15450, Description = Aluminum induced protein with YGL and LRDR motif, PFAM = PF12481)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04779_108274-118874' '(at3g60690 : 114.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G45210.1); Has 1342 Blast hits to 1328 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1341; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 101.0) no description available & (reliability: 228.0) & (original description: Putative BnaC02g46720D, Description = BnaC02g46720D protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04779_116389-118887' '(at3g60690 : 115.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G45210.1); Has 1342 Blast hits to 1328 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1341; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 101.0) no description available & (reliability: 230.0) & (original description: Putative RAG1, Description = Auxin-responsive family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04794_106841-109146' '(at4g34770 : 127.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1411 Blast hits to 1394 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1410; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 116.0) no description available & (p32295|arg7_phaau : 111.0) Indole-3-acetic acid-induced protein ARG7 - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 254.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04794_124530-126883' '(at4g38840 : 101.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p32295|arg7_phaau : 100.0) Indole-3-acetic acid-induced protein ARG7 - Phaseolus aureus (Mung bean) (Vigna radiata) & (gnl|cdd|66231 : 100.0) no description available & (reliability: 202.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04794_129899-132214' '(gnl|cdd|66231 : 101.0) no description available & (at4g38840 : 98.2) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p33080|ax10a_soybn : 90.5) Auxin-induced protein X10A - Glycine max (Soybean) & (reliability: 196.4) & (original description: Putative SAUR19, Description = Auxin responsive SAUR protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04872_94743-111163' '(at5g64600 : 672.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G22460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66790 : 455.0) no description available & (reliability: 1344.0) & (original description: Putative At5g64600, Description = Auxin-independent growth promoter-like protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04887_76464-81264' '(at1g60710 : 565.0) Encodes ATB2.; ATB2; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60730.1); Has 30719 Blast hits to 30695 proteins in 2595 species: Archae - 650; Bacteria - 20319; Metazoa - 1822; Fungi - 2308; Plants - 1286; Viruses - 0; Other Eukaryotes - 4334 (source: NCBI BLink). & (p40691|a115_tobac : 553.0) Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36788 : 376.0) no description available & (gnl|cdd|31011 : 295.0) no description available & (reliability: 1130.0) & (original description: Putative iolS, Description = Aldo/keto reductase, PFAM = PF00248)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf04979_353778-356401' '(at5g50760 : 92.8) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT3G43120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 185.6) & (original description: Putative SAUR2, Description = Calmodulin binding protein, putative, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf05131_2062-4511' '(at1g29500 : 126.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative SAUR66, Description = Auxin-responsive protein SAUR66, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf05152_168496-171342' '(at3g25290 : 180.0) Auxin-responsive family protein; INVOLVED IN: multicellular organismal development; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT4G12980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39494 : 120.0) no description available & (gnl|cdd|68111 : 120.0) no description available & (reliability: 360.0) & (original description: Putative BnaAnng17240D, Description = BnaAnng17240D protein, PFAM = PF04526)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf05152_340109-344044' '(at3g25290 : 426.0) Auxin-responsive family protein; INVOLVED IN: multicellular organismal development; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT4G12980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39494 : 317.0) no description available & (gnl|cdd|68111 : 132.0) no description available & (reliability: 852.0) & (original description: Putative poni1, Description = Auxin-induced in root cultures protein 12, PFAM = PF03188;PF04526)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf05226_222832-230915' '(at1g76270 : 687.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G20550.1); Has 844 Blast hits to 841 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 842; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 521.0) no description available & (reliability: 1374.0) & (original description: Putative axi 1, Description = Axi 1 protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf05229_198307-201380' '(at1g69690 : 150.0) TCP family transcription factor ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 (TAIR:AT3G47620.1); Has 863 Blast hits to 861 proteins in 131 species: Archae - 0; Bacteria - 6; Metazoa - 120; Fungi - 15; Plants - 698; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|67262 : 116.0) no description available & (reliability: 278.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf05298_32152-37912' '(at2g37980 : 734.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G54100.1); Has 844 Blast hits to 822 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 842; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 471.0) no description available & (reliability: 1468.0) & (original description: Putative BnaA09g34020D, Description = BnaA09g34020D protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf05442_196758-199102' '(at2g37030 : 128.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT3G53250.1); Has 1122 Blast hits to 1114 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1121; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 85.8) no description available & (reliability: 256.0) & (original description: Putative BnaC08g24350D, Description = BnaC08g24350D protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf05584_116928-122728' '(q6i581|gh35_orysa : 807.0) Probable indole-3-acetic acid-amido synthetase GH3.5 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 5) (OsGH3-5) - Oryza sativa (Rice) & (at2g46370 : 783.0) Encodes a jasmonate-amido synthetase that is a member of the GH3 family of proteins. JAR1 catalyzes the formation of a biologically active jasmonyl-isoleucine (JA-Ile) conjugate. JA-Ile promotes the interaction between JAZ1 and COI1 in the jasmonate signaling pathway. JAR1 localizes to the cytoplasm and is also a phytochrome A signaling component. JAR1 is an auxin-induced gene. Loss of function mutants are defective in a variety of responses to jasmonic acid. JAR1 has additional enzymatic activities in vitro, (e.g. the ability to synthesize adenosine 5'-tetraphosphate and other JA conjugates), but there are no data to show whether JAR1 catalyzes many of these reactions in vivo. JAR1 is involved in pathogen defense, sensitivity to ozone, and wound responses.; JASMONATE RESISTANT 1 (JAR1); FUNCTIONS IN: catalytic activity, adenylyltransferase activity, ATP binding, jasmonate-amino synthetase activity; INVOLVED IN: in 13 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G03400.1). & (gnl|cdd|66963 : 670.0) no description available & (reliability: 1566.0) & (original description: Putative DFL2, Description = Indole-3-acetic acid-amido synthetase, PFAM = PF03321)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf05712_198576-205269' '(at1g14020 : 763.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G03280.1); Has 821 Blast hits to 817 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 821; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 511.0) no description available & (reliability: 1526.0) & (original description: Putative At2g03280, Description = O-fucosyltransferase-like protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf05846_40594-42842' '(p33081|ax15a_soybn : 112.0) Auxin-induced protein 15A - Glycine max (Soybean) & (at5g18030 : 111.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G18020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66231 : 110.0) no description available & (reliability: 222.0) & (original description: Putative upa1, Description = Putative auxin-induced SAUR-like protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf05846_158128-160427' '(at4g34770 : 139.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1411 Blast hits to 1394 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1410; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 123.0) no description available & (p32295|arg7_phaau : 113.0) Indole-3-acetic acid-induced protein ARG7 - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 278.0) & (original description: Putative ARG7, Description = Indole-3-acetic acid-induced protein ARG7, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf05929_382475-391160' '(at2g33310 : 213.0) Auxin induced gene, IAA13 (IAA13).; auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 167.0) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (gnl|cdd|66035 : 137.0) no description available & (reliability: 426.0) & (original description: Putative IAA13, Description = Auxin-responsive protein IAA13, PFAM = PF02309)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf06283_11586-18338' '(p40691|a115_tobac : 600.0) Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) & (at1g60710 : 553.0) Encodes ATB2.; ATB2; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60730.1); Has 30719 Blast hits to 30695 proteins in 2595 species: Archae - 650; Bacteria - 20319; Metazoa - 1822; Fungi - 2308; Plants - 1286; Viruses - 0; Other Eukaryotes - 4334 (source: NCBI BLink). & (gnl|cdd|36788 : 370.0) no description available & (gnl|cdd|31011 : 302.0) no description available & (reliability: 1106.0) & (original description: Putative iolS, Description = Aldo/keto reductase, PFAM = PF00248)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf06357_183296-189891' '(at1g20550 : 710.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G76270.1); Has 868 Blast hits to 809 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 868; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 540.0) no description available & (reliability: 1396.0) & (original description: Putative axi 1, Description = Axi 1 protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf06413_316061-318513' '(at1g29500 : 123.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative upa5, Description = Auxin-induced SAUR-like protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf06461_778679-781065' '(at5g20820 : 113.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G72430.1); Has 120 Blast hits to 120 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 120; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative BnaA02g05100D, Description = BnaA02g05100D protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf06525_74002-79494' '(at3g25290 : 367.0) Auxin-responsive family protein; INVOLVED IN: multicellular organismal development; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT4G12980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39494 : 298.0) no description available & (gnl|cdd|68111 : 125.0) no description available & (reliability: 734.0) & (original description: Putative poni1, Description = Auxin-induced in root cultures protein 12, PFAM = PF04526;PF03188)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf06530_43719-46162' '(at5g50760 : 92.8) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT3G43120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66231 : 88.1) no description available & (reliability: 185.6) & (original description: Putative SAUR2, Description = SAUR family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf06674_377915-386810' '(at3g30300 : 773.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G03810.1); Has 982 Blast hits to 802 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 982; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 275.0) no description available & (reliability: 1546.0) & (original description: Putative EDA30, Description = O-fucosyltransferase-like protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf06739_36246-39729' '(at5g20810 : 121.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: calmodulin binding; INVOLVED IN: response to auxin stimulus; LOCATED IN: peroxisome; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT3G43120.1); Has 1495 Blast hits to 1481 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1494; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 95.8) no description available & (reliability: 242.0) & (original description: Putative ARG7, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf06933_57439-59819' '(at5g20820 : 111.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G72430.1); Has 120 Blast hits to 120 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 120; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative si605013h05, Description = SAUR33-auxin-responsive SAUR family member, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf07157_83289-85603' '(at4g34760 : 170.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 127.0) no description available & (p33081|ax15a_soybn : 85.1) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 340.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf07160_56653-58907' '(p33081|ax15a_soybn : 117.0) Auxin-induced protein 15A - Glycine max (Soybean) & (at4g38840 : 114.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 106.0) no description available & (reliability: 228.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf07423_312898-315532' '(at1g29500 : 124.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative aux2, Description = SAUR-like auxin-responsive protein family, putative, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf07423_315868-320208' '(at1g29500 : 132.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative upa5, Description = Auxin-induced SAUR-like protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf07428_20453-23840' '(at3g07390 : 131.0) isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular.; Auxin-Induced in Root cultures 12 (AIR12); FUNCTIONS IN: extracellular matrix structural constituent; INVOLVED IN: response to auxin stimulus, lateral root morphogenesis, extracellular matrix organization; LOCATED IN: extracellular region, anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT3G25290.2); Has 254 Blast hits to 254 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 248; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|68111 : 107.0) no description available & (gnl|cdd|39494 : 106.0) no description available & (reliability: 262.0) & (original description: Putative AIR12, Description = Auxin-induced in root cultures protein 12, putative, PFAM = PF04526)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf07465_394202-396642' '(at1g75590 : 160.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G10990.1); Has 1416 Blast hits to 1399 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1415; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 106.0) no description available & (reliability: 320.0) & (original description: Putative SAUR39, Description = SAUR family protein 39, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf07527_332358-339749' '(at4g03400 : 837.0) Encodes a GH3-related gene involved in red light-specific hypocotyl elongation. Analysis of sense and antisense transgenic plants suggests that DFL2 is located downstream of red light signal transduction and determines the degree of hypocotyl elongation.; DWARF IN LIGHT 2 (DFL2); INVOLVED IN: response to auxin stimulus, response to light stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT2G46370.4); Has 1425 Blast hits to 1352 proteins in 234 species: Archae - 0; Bacteria - 486; Metazoa - 52; Fungi - 2; Plants - 663; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink). & (gnl|cdd|66963 : 648.0) no description available & (q6i581|gh35_orysa : 604.0) Probable indole-3-acetic acid-amido synthetase GH3.5 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 5) (OsGH3-5) - Oryza sativa (Rice) & (reliability: 1674.0) & (original description: Putative DFL2, Description = Indole-3-acetic acid-amido synthetase, PFAM = PF03321)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf07590_821837-832675' '(at3g26370 : 835.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT4G24530.1); Has 827 Blast hits to 825 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 827; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 388.0) no description available & (reliability: 1670.0) & (original description: Putative At3g26370, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf07829_542568-547599' '(at3g47620 : 122.0) Encodes a transcription factor AtTCP14 that regulates seed germination. AtTCP14 shows elevated expression level just prior to germination. AtTCP14 is predominantly expressed in the vascular tissue of the embryo, and affects gene expression in radicles in a non-cell-autonomous manner.; "TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14" (TCP14); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G58100.1); Has 1158 Blast hits to 1082 proteins in 149 species: Archae - 2; Bacteria - 69; Metazoa - 397; Fungi - 50; Plants - 507; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|67262 : 112.0) no description available & (reliability: 244.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf08091_21341-39462' '(p33081|ax15a_soybn : 113.0) Auxin-induced protein 15A - Glycine max (Soybean) & (at4g38840 : 112.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 107.0) no description available & (reliability: 224.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf08141_122444-124886' '(at1g29500 : 107.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative upa5, Description = SAUR-like auxin-responsive protein family, putative, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf08151_86158-93497' '(at2g20120 : 405.0) Encodes an integral membrane protein of unknown function, highly conserved between plants and bacteria; is likely to be involved in a mechanism that negatively regulates the differentiation of vascular tissue in the stem. Mutants display a dramatic increase in vascular tissue development in the stem in place of the interfascicular region that normally separates the vascular bundles.; CONTINUOUS VASCULAR RING (COV1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: stem vascular tissue pattern formation; LOCATED IN: integral to membrane; EXPRESSED IN: stem, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF502 (InterPro:IPR007462); BEST Arabidopsis thaliana protein match is: like COV 1 (TAIR:AT2G20130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86633 : 187.0) no description available & (reliability: 810.0) & (original description: Putative COV1, Description = Protein CONTINUOUS VASCULAR RING 1, PFAM = PF04367)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf08206_299964-302401' '(at2g46690 : 106.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT3G61900.1); Has 1291 Blast hits to 1280 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1290; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 95.0) no description available & (reliability: 212.0) & (original description: Putative SAUR59, Description = SAUR59, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf08330_149524-154491' '(at2g44500 : 677.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G07900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66790 : 433.0) no description available & (reliability: 1268.0) & (original description: Putative At2g44500, Description = Axi 1 protein-like protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf08419_269661-273377' '(gnl|cdd|48483 : 322.0) no description available & (p24805|tsjt1_tobac : 303.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (at4g27450 : 221.0) Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT3G15450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative At3g15450, Description = Aluminum induced protein with YGL and LRDR motif, PFAM = PF12481)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf08687_31767-38154' '(at5g54510 : 959.0) Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3).; DWARF IN LIGHT 1 (DFL1); FUNCTIONS IN: indole-3-acetic acid amido synthetase activity; INVOLVED IN: auxin homeostasis, response to auxin stimulus, auxin mediated signaling pathway, unidimensional cell growth; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G27260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8lqm5|gh31_orysa : 845.0) Probable indole-3-acetic acid-amido synthetase GH3.1 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 1) (OsGH3-1) - Oryza sativa (Rice) & (gnl|cdd|66963 : 799.0) no description available & (reliability: 1918.0) & (original description: Putative BRU6, Description = Auxin-responsive GH3 family protein, PFAM = PF03321)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf08690_1-3144' '(at3g61750 : 316.0) Cytochrome b561/ferric reductase transmembrane with DOMON related domain; FUNCTIONS IN: dopamine beta-monooxygenase activity; INVOLVED IN: histidine catabolic process; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593), DOMON (InterPro:IPR013050); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane with DOMON related domain (TAIR:AT3G07570.1); Has 634 Blast hits to 633 proteins in 115 species: Archae - 2; Bacteria - 2; Metazoa - 111; Fungi - 103; Plants - 398; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|39494 : 187.0) no description available & (gnl|cdd|47940 : 89.5) no description available & (reliability: 632.0) & (original description: Putative At3g61750, Description = Cytochrome b561 and DOMON domain-containing protein At3g61750, PFAM = PF03188;PF03351)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf08979_5441-7695' '(p33081|ax15a_soybn : 118.0) Auxin-induced protein 15A - Glycine max (Soybean) & (at4g38840 : 114.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 111.0) no description available & (reliability: 228.0) & (original description: Putative upa1, Description = Putative auxin-induced SAUR-like protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf08979_51210-55438' '(p33081|ax15a_soybn : 115.0) Auxin-induced protein 15A - Glycine max (Soybean) & (at4g38840 : 110.0) SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 103.0) no description available & (reliability: 220.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf09010_408540-410854' '(at4g34760 : 172.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 133.0) no description available & (p32295|arg7_phaau : 88.6) Indole-3-acetic acid-induced protein ARG7 - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 344.0) & (original description: Putative SAUR, Description = SAUR family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf09387_383162-385647' '(at3g60690 : 117.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G45210.1); Has 1342 Blast hits to 1328 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1341; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 100.0) no description available & (reliability: 234.0) & (original description: Putative BnaCnng22170D, Description = BnaCnng22170D protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf09387_476721-479230' '(at3g60690 : 116.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G45210.1); Has 1342 Blast hits to 1328 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1341; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 101.0) no description available & (reliability: 232.0) & (original description: Putative BnaCnng22170D, Description = BnaCnng22170D protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf09665_81929-84411' '(at3g60690 : 133.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G45210.1); Has 1342 Blast hits to 1328 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1341; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 108.0) no description available & (reliability: 266.0) & (original description: Putative SAUR36, Description = Auxin-responsive protein SAUR36, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf09951_145359-147727' '(at3g61900 : 109.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G46690.1); Has 1394 Blast hits to 1380 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1393; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 97.7) no description available & (reliability: 218.0) & (original description: Putative BnaC08g31820D, Description = BnaC08g31820D protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf10465_6732-11390' '(at2g47750 : 808.0) Encodes GH3.9, a member of the GH3 family auxin-responsive genes. gh3.9-1 mutants had greater primary root length, increased sensitivity to indole-3-acetic acid (IAA)-mediated root growth inhibition, but no obvious effects on apical dominance or leaf morphology.; putative indole-3-acetic acid-amido synthetase GH3.9 (GH3.9); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus; LOCATED IN: chloroplast envelope; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT1G28130.1); Has 1429 Blast hits to 1301 proteins in 228 species: Archae - 0; Bacteria - 485; Metazoa - 53; Fungi - 2; Plants - 681; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink). & (gnl|cdd|66963 : 743.0) no description available & (p0c0m3|gh311_orysa : 733.0) Probable indole-3-acetic acid-amido synthetase GH3.11 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 11) (OsGH3-11) - Oryza sativa (Rice) & (reliability: 1616.0) & (original description: Putative BRU6, Description = Auxin-responsive GH3 family protein, PFAM = PF03321)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf10763_31816-35297' '(at4g27450 : 407.0) Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT3G15450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|48483 : 348.0) no description available & (p24805|tsjt1_tobac : 108.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (reliability: 814.0) & (original description: Putative AILP1, Description = Aluminum induced protein with YGL and LRDR motifs, PFAM = PF12481)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf10940_387817-390857' '(at5g43830 : 383.0) Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT3G22850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|48483 : 358.0) no description available & (p24805|tsjt1_tobac : 134.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (reliability: 766.0) & (original description: Putative At3g22850, Description = Aluminum induced protein with YGL and LRDR motif, PFAM = PF12481)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf11178_266992-271191' '(at2g14960 : 968.0) encodes a protein similar to IAA-amido synthases. Lines carrying an insertion in this gene are hypersensitive to auxin.; GH3.1; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G37390.1); Has 1628 Blast hits to 1412 proteins in 230 species: Archae - 1; Bacteria - 595; Metazoa - 55; Fungi - 2; Plants - 676; Viruses - 0; Other Eukaryotes - 299 (source: NCBI BLink). & (p0c0m2|gh32_orysa : 898.0) Probable indole-3-acetic acid-amido synthetase GH3.2 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 2) (OsGH3-2) - Oryza sativa (Rice) & (gnl|cdd|66963 : 816.0) no description available & (reliability: 1936.0) & (original description: Putative BRU6, Description = Auxin-responsive GH3 family protein, PFAM = PF03321)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf11515_64581-73836' '(at4g24530 : 738.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT5G65470.1); Has 832 Blast hits to 825 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 832; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 469.0) no description available & (reliability: 1462.0) & (original description: Putative BnaC01g16360D, Description = BnaC01g16360D protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf11535_200388-205788' '(at2g33310 : 179.0) Auxin induced gene, IAA13 (IAA13).; auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 161.0) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (gnl|cdd|66035 : 135.0) no description available & (reliability: 358.0) & (original description: Putative IAA13, Description = Auxin-responsive protein IAA13, PFAM = PF02309)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf11621_14695-17009' '(gnl|cdd|66231 : 107.0) no description available & (at2g21210 : 104.0) Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers.; SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G38840.1); Has 1354 Blast hits to 1340 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1353; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p33080|ax10a_soybn : 103.0) Auxin-induced protein X10A - Glycine max (Soybean) & (reliability: 208.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive family protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf12498_11485-13937' '(at1g29450 : 111.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29500.1); Has 675 Blast hits to 661 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 675; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative upa5, Description = Auxin-induced SAUR-like protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf12498_13244-15519' '(at2g21210 : 113.0) Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers.; SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G38840.1); Has 1354 Blast hits to 1340 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1353; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 105.0) no description available & (p33081|ax15a_soybn : 102.0) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 226.0) & (original description: Putative upa1, Description = Auxin responsive SAUR protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf13270_350053-354154' '(at5g54510 : 1067.0) Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3).; DWARF IN LIGHT 1 (DFL1); FUNCTIONS IN: indole-3-acetic acid amido synthetase activity; INVOLVED IN: auxin homeostasis, response to auxin stimulus, auxin mediated signaling pathway, unidimensional cell growth; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G27260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8lqm5|gh31_orysa : 869.0) Probable indole-3-acetic acid-amido synthetase GH3.1 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 1) (OsGH3-1) - Oryza sativa (Rice) & (gnl|cdd|66963 : 828.0) no description available & (reliability: 2134.0) & (original description: Putative BRU6, Description = Auxin-responsive GH3 family protein, PFAM = PF03321)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf13621_116064-121792' '(at3g61750 : 332.0) Cytochrome b561/ferric reductase transmembrane with DOMON related domain; FUNCTIONS IN: dopamine beta-monooxygenase activity; INVOLVED IN: histidine catabolic process; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593), DOMON (InterPro:IPR013050); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane with DOMON related domain (TAIR:AT3G07570.1); Has 634 Blast hits to 633 proteins in 115 species: Archae - 2; Bacteria - 2; Metazoa - 111; Fungi - 103; Plants - 398; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|39494 : 177.0) no description available & (gnl|cdd|47940 : 83.7) no description available & (reliability: 664.0) & (original description: Putative At3g61750, Description = Cytochrome b561 and DOMON domain-containing protein At3g61750, PFAM = PF03188)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf13856_85518-87793' '(at2g36210 : 117.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G34780.1); Has 925 Blast hits to 921 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 924; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative BnaC04g09120D, Description = BnaA05g08090D protein, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf16733_27080-31749' '(at5g15740 : 752.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G02250.1); Has 822 Blast hits to 815 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 822; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 488.0) no description available & (reliability: 1488.0) & (original description: Putative Os06g0284200, Description = Os06g0284200 protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf18589_73919-78755' '(at5g47530 : 407.0) Auxin-responsive family protein; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT4G17280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39494 : 281.0) no description available & (gnl|cdd|68111 : 150.0) no description available & (reliability: 814.0) & (original description: Putative poni1, Description = Auxin-induced in root cultures protein 12, PFAM = PF03188;PF04526)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf18771_24355-29826' '(at2g37980 : 708.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G54100.1); Has 844 Blast hits to 822 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 842; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 464.0) no description available & (reliability: 1416.0) & (original description: Putative BnaA09g34020D, Description = BnaA09g34020D protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf19230_266646-270773' '(at5g63390 : 669.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G44500.1); Has 826 Blast hits to 816 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 826; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 379.0) no description available & (reliability: 1338.0) & (original description: Putative At5g63390, Description = Auxin-independent growth promoter-like protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf21415_1-6512' '(at1g20550 : 676.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G76270.1); Has 868 Blast hits to 809 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 868; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 514.0) no description available & (reliability: 1322.0) & (original description: Putative axi 1, Description = Axi 1 protein, PFAM = PF10250)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf21689_53492-55821' '(at2g21220 : 164.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G38860.1); Has 1403 Blast hits to 1386 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1402; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 124.0) no description available & (p33081|ax15a_soybn : 81.3) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 328.0) & (original description: Putative upa1, Description = SAUR-like auxin-responsive protein family, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf21689_117924-120247' '(at2g21220 : 168.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G38860.1); Has 1403 Blast hits to 1386 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1402; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66231 : 123.0) no description available & (p33081|ax15a_soybn : 82.8) Auxin-induced protein 15A - Glycine max (Soybean) & (reliability: 336.0) & (original description: Putative SAUR21, Description = Auxin-induced protein TGSAUR21, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf22940_10402-16455' '(q6i581|gh35_orysa : 825.0) Probable indole-3-acetic acid-amido synthetase GH3.5 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 5) (OsGH3-5) - Oryza sativa (Rice) & (at2g46370 : 809.0) Encodes a jasmonate-amido synthetase that is a member of the GH3 family of proteins. JAR1 catalyzes the formation of a biologically active jasmonyl-isoleucine (JA-Ile) conjugate. JA-Ile promotes the interaction between JAZ1 and COI1 in the jasmonate signaling pathway. JAR1 localizes to the cytoplasm and is also a phytochrome A signaling component. JAR1 is an auxin-induced gene. Loss of function mutants are defective in a variety of responses to jasmonic acid. JAR1 has additional enzymatic activities in vitro, (e.g. the ability to synthesize adenosine 5'-tetraphosphate and other JA conjugates), but there are no data to show whether JAR1 catalyzes many of these reactions in vivo. JAR1 is involved in pathogen defense, sensitivity to ozone, and wound responses.; JASMONATE RESISTANT 1 (JAR1); FUNCTIONS IN: catalytic activity, adenylyltransferase activity, ATP binding, jasmonate-amino synthetase activity; INVOLVED IN: in 13 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G03400.1). & (gnl|cdd|66963 : 678.0) no description available & (reliability: 1618.0) & (original description: Putative DFL2, Description = Indole-3-acetic acid-amido synthetase, PFAM = PF03321)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf25073_210974-212989' '(at5g20820 : 104.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G72430.1); Has 120 Blast hits to 120 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 120; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative si605013h05, Description = SAUR33-auxin-responsive SAUR family member, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf25772_1-606' '(at1g29500 : 120.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative SAUR66, Description = Auxin-responsive protein SAUR66, PFAM = PF02519)' T '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'niben101scf31173_60910-65155' '(at2g14960 : 985.0) encodes a protein similar to IAA-amido synthases. Lines carrying an insertion in this gene are hypersensitive to auxin.; GH3.1; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G37390.1); Has 1628 Blast hits to 1412 proteins in 230 species: Archae - 1; Bacteria - 595; Metazoa - 55; Fungi - 2; Plants - 676; Viruses - 0; Other Eukaryotes - 299 (source: NCBI BLink). & (q7xin9|gh38_orysa : 910.0) Probable indole-3-acetic acid-amido synthetase GH3.8 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 8) (OsGH3-8) - Oryza sativa (Rice) & (gnl|cdd|66963 : 839.0) no description available & (reliability: 1970.0) & (original description: Putative BRU6, Description = Auxin-responsive GH3 family protein, PFAM = PF03321)' T '17.3' 'hormone metabolism.brassinosteroid' '' '' '17.3.1' 'hormone metabolism.brassinosteroid.synthesis-degradation' '' '' '17.3.1.1' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs' '' '' '17.3.1.1.1' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET2' 'niben044scf00017688ctg003_7969-10709' '(at2g38050 : 290.0) Similar to mammalian steroid-5-alpha-reductase. Involved in the brassinolide biosynthetic pathway.; DE-ETIOLATED 2 (DET2); FUNCTIONS IN: sterol 5-alpha reductase activity; INVOLVED IN: response to light stimulus, brassinosteroid homeostasis, brassinosteroid biosynthetic process; LOCATED IN: endomembrane system, integral to membrane, membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104), 3-oxo-5-alpha-steroid 4-dehydrogenase (InterPro:IPR016636); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT5G16010.1); Has 1601 Blast hits to 1599 proteins in 320 species: Archae - 0; Bacteria - 193; Metazoa - 442; Fungi - 195; Plants - 239; Viruses - 0; Other Eukaryotes - 532 (source: NCBI BLink). & (gnl|cdd|36851 : 227.0) no description available & (gnl|cdd|66254 : 150.0) no description available & (reliability: 580.0) & (original description: Putative DET2, Description = Steroid 5-alpha-reductase DET2, PFAM = PF02544)' T '17.3.1.1.1' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET2' 'niben101scf00466_353267-360873' '(at2g16530 : 353.0) 3-oxo-5-alpha-steroid 4-dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, 3-oxo-5-alpha-steroid 4-dehydrogenase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT1G72590.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36853 : 220.0) no description available & (reliability: 706.0) & (original description: Putative At2g16530, Description = Polyprenol reductase 2, PFAM = PF02544)' T '17.3.1.1.1' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET2' 'niben101scf00624_16438-23591' '(at5g16010 : 254.0) 3-oxo-5-alpha-steroid 4-dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, 3-oxo-5-alpha-steroid 4-dehydrogenase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT3G55360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36851 : 158.0) no description available & (gnl|cdd|66254 : 93.4) no description available & (reliability: 508.0) & (original description: Putative BnaC02g06360D, Description = BnaC02g06360D protein, PFAM = PF02544)' T '17.3.1.1.1' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET2' 'niben101scf04738_376989-380802' '(at5g16010 : 306.0) 3-oxo-5-alpha-steroid 4-dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, 3-oxo-5-alpha-steroid 4-dehydrogenase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT3G55360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36851 : 186.0) no description available & (gnl|cdd|66254 : 93.4) no description available & (reliability: 612.0) & (original description: Putative BnaC02g06360D, Description = BnaC02g06360D protein, PFAM = PF02544)' T '17.3.1.1.1' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET2' 'niben101scf09123_129329-132438' '(at2g38050 : 292.0) Similar to mammalian steroid-5-alpha-reductase. Involved in the brassinolide biosynthetic pathway.; DE-ETIOLATED 2 (DET2); FUNCTIONS IN: sterol 5-alpha reductase activity; INVOLVED IN: response to light stimulus, brassinosteroid homeostasis, brassinosteroid biosynthetic process; LOCATED IN: endomembrane system, integral to membrane, membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104), 3-oxo-5-alpha-steroid 4-dehydrogenase (InterPro:IPR016636); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT5G16010.1); Has 1601 Blast hits to 1599 proteins in 320 species: Archae - 0; Bacteria - 193; Metazoa - 442; Fungi - 195; Plants - 239; Viruses - 0; Other Eukaryotes - 532 (source: NCBI BLink). & (gnl|cdd|36851 : 229.0) no description available & (gnl|cdd|66254 : 152.0) no description available & (reliability: 584.0) & (original description: Putative DET2, Description = Steroid 5-alpha-reductase DET2, PFAM = PF02544)' T '17.3.1.1.1' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET2' 'niben101scf10919_112895-131739' '(at2g16530 : 340.0) 3-oxo-5-alpha-steroid 4-dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, 3-oxo-5-alpha-steroid 4-dehydrogenase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT1G72590.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36853 : 218.0) no description available & (reliability: 680.0) & (original description: Putative OsI_17065, Description = Polyprenol reductase 1, PFAM = PF02544)' T '17.3.1.1.1' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET2' 'niben101scf14562_15045-17809' '(at2g38050 : 253.0) Similar to mammalian steroid-5-alpha-reductase. Involved in the brassinolide biosynthetic pathway.; DE-ETIOLATED 2 (DET2); FUNCTIONS IN: sterol 5-alpha reductase activity; INVOLVED IN: response to light stimulus, brassinosteroid homeostasis, brassinosteroid biosynthetic process; LOCATED IN: endomembrane system, integral to membrane, membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104), 3-oxo-5-alpha-steroid 4-dehydrogenase (InterPro:IPR016636); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT5G16010.1); Has 1601 Blast hits to 1599 proteins in 320 species: Archae - 0; Bacteria - 193; Metazoa - 442; Fungi - 195; Plants - 239; Viruses - 0; Other Eukaryotes - 532 (source: NCBI BLink). & (gnl|cdd|36851 : 217.0) no description available & (gnl|cdd|66254 : 141.0) no description available & (reliability: 506.0) & (original description: Putative DET2, Description = Steroid 5-alpha-reductase DET2, PFAM = PF02544)' T '17.3.1.1.1' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET2' 'niben101scf25231_16198-19786' '(at5g16010 : 251.0) 3-oxo-5-alpha-steroid 4-dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, 3-oxo-5-alpha-steroid 4-dehydrogenase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT3G55360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36851 : 176.0) no description available & (gnl|cdd|66254 : 94.9) no description available & (reliability: 502.0) & (original description: Putative BnaC02g06360D, Description = BnaC02g06360D protein, PFAM = PF02544)' T '17.3.1.1.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DWF4' 'nbv0.5scaffold3490_20830-26355' '(q6f4f5|c724b_orysa : 415.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (at3g50660 : 344.0) Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate.; DWARF 4 (DWF4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G05690.1); Has 31120 Blast hits to 31036 proteins in 1650 species: Archae - 61; Bacteria - 5303; Metazoa - 10591; Fungi - 5722; Plants - 7996; Viruses - 3; Other Eukaryotes - 1444 (source: NCBI BLink). & (gnl|cdd|35379 : 214.0) no description available & (gnl|cdd|84486 : 147.0) no description available & (reliability: 688.0) & (original description: Putative CYP724B1, Description = Cytochrome P450 724B1, PFAM = PF00067)' T '17.3.1.1.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DWF4' 'nbv0.5scaffold3490_20854-26182' '(q6f4f5|c724b_orysa : 349.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (at5g14400 : 315.0) member of CYP724A; "cytochrome P450, family 724, subfamily A, polypeptide 1" (CYP724A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT3G50660.1); Has 22938 Blast hits to 22894 proteins in 1383 species: Archae - 43; Bacteria - 3025; Metazoa - 8566; Fungi - 3762; Plants - 6637; Viruses - 3; Other Eukaryotes - 902 (source: NCBI BLink). & (gnl|cdd|35379 : 182.0) no description available & (gnl|cdd|32307 : 119.0) no description available & (reliability: 584.0) & (original description: Putative D11, Description = Cytochrome P450 724B1, PFAM = PF00067;PF00067)' T '17.3.1.1.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DWF4' 'niben101scf03693_218175-225641' '(at3g50660 : 699.0) Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate.; DWARF 4 (DWF4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G05690.1); Has 31120 Blast hits to 31036 proteins in 1650 species: Archae - 61; Bacteria - 5303; Metazoa - 10591; Fungi - 5722; Plants - 7996; Viruses - 3; Other Eukaryotes - 1444 (source: NCBI BLink). & (q6f4f5|c724b_orysa : 409.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (gnl|cdd|35379 : 291.0) no description available & (gnl|cdd|84486 : 172.0) no description available & (reliability: 1398.0) & (original description: Putative CYP90B1, Description = Cytochrome P450 90B1, PFAM = PF00067)' T '17.3.1.1.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DWF4' 'niben101scf07234_70945-76675' '(q6f4f5|c724b_orysa : 635.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (at3g50660 : 410.0) Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate.; DWARF 4 (DWF4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G05690.1); Has 31120 Blast hits to 31036 proteins in 1650 species: Archae - 61; Bacteria - 5303; Metazoa - 10591; Fungi - 5722; Plants - 7996; Viruses - 3; Other Eukaryotes - 1444 (source: NCBI BLink). & (gnl|cdd|35379 : 273.0) no description available & (gnl|cdd|84486 : 179.0) no description available & (reliability: 820.0) & (original description: Putative CYP724B1, Description = Cytochrome P450 724B1, PFAM = PF00067)' T '17.3.1.1.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DWF4' 'niben101scf09685_12312-18510' '(q6f4f5|c724b_orysa : 473.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (at3g50660 : 402.0) Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate.; DWARF 4 (DWF4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G05690.1); Has 31120 Blast hits to 31036 proteins in 1650 species: Archae - 61; Bacteria - 5303; Metazoa - 10591; Fungi - 5722; Plants - 7996; Viruses - 3; Other Eukaryotes - 1444 (source: NCBI BLink). & (gnl|cdd|35379 : 244.0) no description available & (gnl|cdd|84486 : 158.0) no description available & (reliability: 804.0) & (original description: Putative CYP724B1, Description = Cytochrome P450 724B1, PFAM = PF00067)' T '17.3.1.1.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DWF4' 'niben101scf09685_20992-26720' '(q6f4f5|c724b_orysa : 439.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (at3g50660 : 360.0) Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate.; DWARF 4 (DWF4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G05690.1); Has 31120 Blast hits to 31036 proteins in 1650 species: Archae - 61; Bacteria - 5303; Metazoa - 10591; Fungi - 5722; Plants - 7996; Viruses - 3; Other Eukaryotes - 1444 (source: NCBI BLink). & (gnl|cdd|35379 : 228.0) no description available & (gnl|cdd|84486 : 156.0) no description available & (reliability: 720.0) & (original description: Putative CYP724B1, Description = Cytochrome P450 724B1, PFAM = PF00067)' T '17.3.1.1.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DWF4' 'niben101scf09685_21865-26544' '(q6f4f5|c724b_orysa : 316.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (at3g50660 : 278.0) Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate.; DWARF 4 (DWF4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G05690.1); Has 31120 Blast hits to 31036 proteins in 1650 species: Archae - 61; Bacteria - 5303; Metazoa - 10591; Fungi - 5722; Plants - 7996; Viruses - 3; Other Eukaryotes - 1444 (source: NCBI BLink). & (gnl|cdd|35379 : 176.0) no description available & (gnl|cdd|84486 : 129.0) no description available & (reliability: 556.0) & (original description: Putative D11, Description = Cytochrome P450 90B1, PFAM = PF00067)' T '17.3.1.1.3' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.CPD' 'niben044scf00047157ctg003_6397-15414' '(at5g05690 : 661.0) Encodes a member of the CP90A family, a cytochrome P450 monooxygenase which converts 6-deoxocathasterone to 6-deoxoteasterone in the late C6 oxidation pathway and cathasterone to teasterone in the early C6 oxidation pathway of brassinolide biosynthesis. Expressed in cotyledons and leaves. Mutants display de-etiolation and derepression of light-induced genes in the dark, dwarfism, male sterility and activation of stress-regulated genes in the light. The expression of the gene using a CPD promoter:LUC fusion construct was shown to be under circadian and light control. Additionally, the circadian regulation was shown to be independent of BR levels as it remains unchanged in bri1 mutant lines. CPD appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through a BRI1-mediated signaling pathway that affects FLC expression levels, as uncovered by double mutant analyses.; CONSTITUTIVE PHOTOMORPHOGENIC DWARF (CPD); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: in 9 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 90, subfamily D, polypeptide 1 (TAIR:AT3G13730.1); Has 33335 Blast hits to 33282 proteins in 1705 species: Archae - 54; Bacteria - 6996; Metazoa - 10729; Fungi - 6001; Plants - 7974; Viruses - 3; Other Eukaryotes - 1578 (source: NCBI BLink). & (q94iw5|c90d2_orysa : 330.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|35379 : 281.0) no description available & (gnl|cdd|84486 : 172.0) no description available & (reliability: 1322.0) & (original description: Putative CYP90A1, Description = Cytochrome P450 90A1, PFAM = PF00067)' T '17.3.1.1.3' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.CPD' 'niben101scf04044_707946-716300' '(at5g05690 : 674.0) Encodes a member of the CP90A family, a cytochrome P450 monooxygenase which converts 6-deoxocathasterone to 6-deoxoteasterone in the late C6 oxidation pathway and cathasterone to teasterone in the early C6 oxidation pathway of brassinolide biosynthesis. Expressed in cotyledons and leaves. Mutants display de-etiolation and derepression of light-induced genes in the dark, dwarfism, male sterility and activation of stress-regulated genes in the light. The expression of the gene using a CPD promoter:LUC fusion construct was shown to be under circadian and light control. Additionally, the circadian regulation was shown to be independent of BR levels as it remains unchanged in bri1 mutant lines. CPD appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through a BRI1-mediated signaling pathway that affects FLC expression levels, as uncovered by double mutant analyses.; CONSTITUTIVE PHOTOMORPHOGENIC DWARF (CPD); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: in 9 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 90, subfamily D, polypeptide 1 (TAIR:AT3G13730.1); Has 33335 Blast hits to 33282 proteins in 1705 species: Archae - 54; Bacteria - 6996; Metazoa - 10729; Fungi - 6001; Plants - 7974; Viruses - 3; Other Eukaryotes - 1578 (source: NCBI BLink). & (q94iw5|c90d2_orysa : 335.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|35379 : 289.0) no description available & (gnl|cdd|84486 : 168.0) no description available & (reliability: 1348.0) & (original description: Putative CYP90A1, Description = Cytochrome P450 90A1, PFAM = PF00067;PF00067)' T '17.3.1.1.4' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.BR6OX' 'niben101scf02732_138089-142743' '(q69f95|c85a_phavu : 772.0) Cytochrome P450 85A (EC 1.14.-.-) (C6-oxidase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at5g38970 : 677.0) Encodes a polypeptide involved in the C-6 oxidation of brassinosteroids. Heterologous expression of the protein in yeast conferred the ability to catalyze multiple reactions in which the C-6 position of 6-deoxocastasterone, 6-deoxotyphasterol, 3-dehydro-6-deoxoteasterone and 6-deoxoteasterone are oxidized.; brassinosteroid-6-oxidase 1 (BR6OX1); FUNCTIONS IN: monooxygenase activity, oxygen binding; INVOLVED IN: brassinosteroid homeostasis, brassinosteroid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: fruit; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403); BEST Arabidopsis thaliana protein match is: brassinosteroid-6-oxidase 2 (TAIR:AT3G30180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35379 : 272.0) no description available & (gnl|cdd|84486 : 176.0) no description available & (reliability: 1354.0) & (original description: Putative CYP85A1, Description = Cytochrome P450 85A1, PFAM = PF00067)' T '17.3.1.1.4' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.BR6OX' 'niben101scf05618_412337-416812' '(q69f95|c85a_phavu : 775.0) Cytochrome P450 85A (EC 1.14.-.-) (C6-oxidase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at5g38970 : 679.0) Encodes a polypeptide involved in the C-6 oxidation of brassinosteroids. Heterologous expression of the protein in yeast conferred the ability to catalyze multiple reactions in which the C-6 position of 6-deoxocastasterone, 6-deoxotyphasterol, 3-dehydro-6-deoxoteasterone and 6-deoxoteasterone are oxidized.; brassinosteroid-6-oxidase 1 (BR6OX1); FUNCTIONS IN: monooxygenase activity, oxygen binding; INVOLVED IN: brassinosteroid homeostasis, brassinosteroid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: fruit; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403); BEST Arabidopsis thaliana protein match is: brassinosteroid-6-oxidase 2 (TAIR:AT3G30180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35379 : 273.0) no description available & (gnl|cdd|84486 : 178.0) no description available & (reliability: 1358.0) & (original description: Putative CYP85A1, Description = Cytochrome P450 85A1, PFAM = PF00067)' T '17.3.1.1.4' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.BR6OX' 'niben101scf14390_191378-197460' '(q69f95|c85a_phavu : 725.0) Cytochrome P450 85A (EC 1.14.-.-) (C6-oxidase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at3g30180 : 649.0) Encodes a cytochrome p450 enzyme that catalyzes the last reaction in the production of brassinolide. It is capable of converting 6-deoxocastasterone into castasterone, a C-6 oxidation, as well as the further conversion of castasterone into brassinolide by a Baeyer-Villinger oxidation reaction at C-6, resulting in the formation of an unusual seven-membered lactone ring. The enzyme possesses high affinity for both C28- and C27-Brassinosteroids. The expression of the gene using a CYP85A2 promoter:LUC fusion construct was shown to be under circadian and light control.; brassinosteroid-6-oxidase 2 (BR6OX2); FUNCTIONS IN: monooxygenase activity, oxygen binding; INVOLVED IN: response to light stimulus, circadian rhythm, brassinosteroid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: brassinosteroid-6-oxidase 1 (TAIR:AT5G38970.1); Has 29372 Blast hits to 29308 proteins in 1622 species: Archae - 48; Bacteria - 4489; Metazoa - 10449; Fungi - 5456; Plants - 7735; Viruses - 3; Other Eukaryotes - 1192 (source: NCBI BLink). & (gnl|cdd|35379 : 271.0) no description available & (gnl|cdd|84486 : 181.0) no description available & (reliability: 1294.0) & (original description: Putative CYP85A1, Description = Cytochrome P450 85A1, PFAM = PF00067)' T '17.3.1.1.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.metabolic regulation' 'niben044scf00038148ctg006_1-1765' '(at1g75130 : 175.0) member of CYP721A; "cytochrome P450, family 721, subfamily A, polypeptide 1" (CYP721A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT2G26710.1); Has 31101 Blast hits to 31007 proteins in 1591 species: Archae - 75; Bacteria - 4273; Metazoa - 11060; Fungi - 6215; Plants - 8065; Viruses - 3; Other Eukaryotes - 1410 (source: NCBI BLink). & (q05047|c72a1_catro : 160.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 144.0) no description available & (gnl|cdd|84486 : 111.0) no description available & (reliability: 330.0) & (original description: Putative BAS1, Description = Secologanin synthase, PFAM = PF00067)' T '17.3.1.1.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.metabolic regulation' 'niben101scf00163_1968387-1971367' '(gnl|cdd|36797 : 270.0) no description available & (at1g13420 : 243.0) Encodes a sulfotransferase. Unlike the related ST4A protein (At2g14920), in vitro experiements show that this enzyme does not act brassinosteroids. ST4B is expressed in the roots and transcript levels rise in response to cytokinin treatment.; sulfotransferase 4B (ST4B); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 4A (TAIR:AT2G14920.1); Has 2771 Blast hits to 2728 proteins in 191 species: Archae - 0; Bacteria - 215; Metazoa - 1679; Fungi - 1; Plants - 543; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|84950 : 200.0) no description available & (reliability: 444.0) & (original description: Putative SOT8, Description = Cytosolic sulfotransferase 8, PFAM = PF00685)' T '17.3.1.1.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.metabolic regulation' 'niben101scf00637_369607-372629' '(gnl|cdd|36797 : 329.0) no description available & (at5g07010 : 325.0) Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).; sulfotransferase 2A (ST2A); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 2B (TAIR:AT5G07000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84950 : 217.0) no description available & (reliability: 634.0) & (original description: Putative SOT15, Description = Cytosolic sulfotransferase 15, PFAM = PF00685)' T '17.3.1.1.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.metabolic regulation' 'niben101scf00783_628131-632501' '(gnl|cdd|36797 : 268.0) no description available & (at3g45070 : 223.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: sulfotransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G45080.1); Has 2794 Blast hits to 2750 proteins in 189 species: Archae - 0; Bacteria - 202; Metazoa - 1707; Fungi - 1; Plants - 542; Viruses - 0; Other Eukaryotes - 342 (source: NCBI BLink). & (gnl|cdd|84950 : 197.0) no description available & (reliability: 422.0) & (original description: Putative ST1, Description = Sulfotransferase, PFAM = PF00685)' T '17.3.1.1.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.metabolic regulation' 'niben101scf03045_342816-345751' '(gnl|cdd|36797 : 258.0) no description available & (at5g07010 : 210.0) Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).; sulfotransferase 2A (ST2A); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 2B (TAIR:AT5G07000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84950 : 190.0) no description available & (reliability: 416.0) & (original description: Putative PGSC0003DMG400039363, Description = Sulfotransferase, PFAM = PF00685)' T '17.3.1.1.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.metabolic regulation' 'niben101scf03173_142474-147086' '(at2g26710 : 365.0) Encodes a member of the cytochrome p450 family that serves as a control point between multiple photoreceptor systems and brassinosteroid signal transduction. Involved in brassinolide metabolism. Mediates response to a variety of light signals including hypocotyl elongation and cotyledon expansion.; PHYB ACTIVATION TAGGED SUPPRESSOR 1 (BAS1); FUNCTIONS IN: steroid hydroxylase activity, oxygen binding; INVOLVED IN: response to light stimulus, response to brassinosteroid stimulus, brassinosteroid homeostasis, brassinosteroid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 8 (TAIR:AT3G14620.1); Has 34717 Blast hits to 34565 proteins in 1738 species: Archae - 71; Bacteria - 6148; Metazoa - 11470; Fungi - 6879; Plants - 8435; Viruses - 3; Other Eukaryotes - 1711 (source: NCBI BLink). & (q05047|c72a1_catro : 330.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 305.0) no description available & (gnl|cdd|84486 : 202.0) no description available & (reliability: 730.0) & (original description: Putative cytochrome P450 CYP866A1, Description = Cytochrome P450 protein, PFAM = PF00067)' T '17.3.1.1.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.metabolic regulation' 'niben101scf04231_335748-343576' '(gnl|cdd|36797 : 285.0) no description available & (at1g18590 : 280.0) encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with preference with methionine-derived desulfoglucosinolates.; sulfotransferase 17 (SOT17); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: desulfo-glucosinolate sulfotransferase 18 (TAIR:AT1G74090.1); Has 2933 Blast hits to 2889 proteins in 198 species: Archae - 0; Bacteria - 241; Metazoa - 1692; Fungi - 1; Plants - 541; Viruses - 0; Other Eukaryotes - 458 (source: NCBI BLink). & (gnl|cdd|84950 : 209.0) no description available & (reliability: 506.0) & (original description: Putative SOT17, Description = Cytosolic sulfotransferase 17, PFAM = PF00685)' T '17.3.1.1.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.metabolic regulation' 'niben101scf04438_213311-216315' '(gnl|cdd|36797 : 353.0) no description available & (at2g03760 : 328.0) Encodes a brassinosteroid sulfotransferase. In vitro experiements show that this enzyme has a preference for 24-epibrassinosteroids, particularly 24-epicathasterone, but does not act on castasterone and brassinolide. It is differentially expressed during development, being more abundant in young seedlings and actively growing cell cultures. Expression is induced in response to salicylic acid and methyl jasmonate and bacterial pathogens.; sulphotransferase 12 (SOT12); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G03770.1); Has 2910 Blast hits to 2872 proteins in 198 species: Archae - 0; Bacteria - 232; Metazoa - 1693; Fungi - 1; Plants - 543; Viruses - 0; Other Eukaryotes - 441 (source: NCBI BLink). & (gnl|cdd|84950 : 231.0) no description available & (reliability: 656.0) & (original description: Putative SOT15, Description = Cytosolic sulfotransferase 15, PFAM = PF00685)' T '17.3.1.1.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.metabolic regulation' 'niben101scf08341_264202-270431' '(at2g26710 : 773.0) Encodes a member of the cytochrome p450 family that serves as a control point between multiple photoreceptor systems and brassinosteroid signal transduction. Involved in brassinolide metabolism. Mediates response to a variety of light signals including hypocotyl elongation and cotyledon expansion.; PHYB ACTIVATION TAGGED SUPPRESSOR 1 (BAS1); FUNCTIONS IN: steroid hydroxylase activity, oxygen binding; INVOLVED IN: response to light stimulus, response to brassinosteroid stimulus, brassinosteroid homeostasis, brassinosteroid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 8 (TAIR:AT3G14620.1); Has 34717 Blast hits to 34565 proteins in 1738 species: Archae - 71; Bacteria - 6148; Metazoa - 11470; Fungi - 6879; Plants - 8435; Viruses - 3; Other Eukaryotes - 1711 (source: NCBI BLink). & (q05047|c72a1_catro : 394.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 347.0) no description available & (gnl|cdd|84486 : 244.0) no description available & (reliability: 1546.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T '17.3.1.1.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.metabolic regulation' 'niben101scf09172_314487-321414' '(at1g75130 : 504.0) member of CYP721A; "cytochrome P450, family 721, subfamily A, polypeptide 1" (CYP721A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT2G26710.1); Has 31101 Blast hits to 31007 proteins in 1591 species: Archae - 75; Bacteria - 4273; Metazoa - 11060; Fungi - 6215; Plants - 8065; Viruses - 3; Other Eukaryotes - 1410 (source: NCBI BLink). & (q05047|c72a1_catro : 358.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 305.0) no description available & (gnl|cdd|84486 : 227.0) no description available & (reliability: 914.0) & (original description: Putative Sb09g019950, Description = Putative uncharacterized protein Sb09g019950, PFAM = PF00067)' T '17.3.1.1.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.metabolic regulation' 'niben101scf15077_235375-240334' '(at2g26710 : 677.0) Encodes a member of the cytochrome p450 family that serves as a control point between multiple photoreceptor systems and brassinosteroid signal transduction. Involved in brassinolide metabolism. Mediates response to a variety of light signals including hypocotyl elongation and cotyledon expansion.; PHYB ACTIVATION TAGGED SUPPRESSOR 1 (BAS1); FUNCTIONS IN: steroid hydroxylase activity, oxygen binding; INVOLVED IN: response to light stimulus, response to brassinosteroid stimulus, brassinosteroid homeostasis, brassinosteroid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 8 (TAIR:AT3G14620.1); Has 34717 Blast hits to 34565 proteins in 1738 species: Archae - 71; Bacteria - 6148; Metazoa - 11470; Fungi - 6879; Plants - 8435; Viruses - 3; Other Eukaryotes - 1711 (source: NCBI BLink). & (q05047|c72a1_catro : 397.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 326.0) no description available & (gnl|cdd|84486 : 257.0) no description available & (reliability: 1354.0) & (original description: Putative cytochrome P450 CYP866D1, Description = Cytochrome P450 CYP866D1, PFAM = PF00067)' T '17.3.1.1.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.metabolic regulation' 'niben101scf24053_19310-22308' '(at2g03760 : 342.0) Encodes a brassinosteroid sulfotransferase. In vitro experiements show that this enzyme has a preference for 24-epibrassinosteroids, particularly 24-epicathasterone, but does not act on castasterone and brassinolide. It is differentially expressed during development, being more abundant in young seedlings and actively growing cell cultures. Expression is induced in response to salicylic acid and methyl jasmonate and bacterial pathogens.; sulphotransferase 12 (SOT12); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G03770.1); Has 2910 Blast hits to 2872 proteins in 198 species: Archae - 0; Bacteria - 232; Metazoa - 1693; Fungi - 1; Plants - 543; Viruses - 0; Other Eukaryotes - 441 (source: NCBI BLink). & (gnl|cdd|36797 : 337.0) no description available & (gnl|cdd|84950 : 223.0) no description available & (reliability: 684.0) & (original description: Putative SOT12, Description = Cytosolic sulfotransferase 12, PFAM = PF00685)' T '17.3.1.1.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.other' 'niben101scf02732_138089-142743' '(q69f95|c85a_phavu : 772.0) Cytochrome P450 85A (EC 1.14.-.-) (C6-oxidase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at5g38970 : 677.0) Encodes a polypeptide involved in the C-6 oxidation of brassinosteroids. Heterologous expression of the protein in yeast conferred the ability to catalyze multiple reactions in which the C-6 position of 6-deoxocastasterone, 6-deoxotyphasterol, 3-dehydro-6-deoxoteasterone and 6-deoxoteasterone are oxidized.; brassinosteroid-6-oxidase 1 (BR6OX1); FUNCTIONS IN: monooxygenase activity, oxygen binding; INVOLVED IN: brassinosteroid homeostasis, brassinosteroid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: fruit; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403); BEST Arabidopsis thaliana protein match is: brassinosteroid-6-oxidase 2 (TAIR:AT3G30180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35379 : 272.0) no description available & (gnl|cdd|84486 : 176.0) no description available & (reliability: 1346.0) & (original description: Putative CYP85A1, Description = Cytochrome P450 85A1, PFAM = PF00067)' T '17.3.1.1.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.other' 'niben101scf03778_95115-102867' '(at3g13730 : 636.0) Encodes a cytochrome P-450 gene that is involved in brassinosteroid biosynthesis, most likely in the conversion step of teasterone (TE) to 3-dehydroteasterone (3DT), and/or 6-deoxoteasterone (6-deoxoTE) to 6-deoxo-3-dehydroteasterone (6-deoxo3DT); or the conversion of cathasterone (CT) to TE, and/or 6-deoxocathasterone (6-deoxoCT) to 6-deoxoTE. Recently, CYP90D1 was shown to catalyse the C-23 hydroxylation of several brassinosteroids (the enzyme has a broad specificity for 22-hydroxylated substrates). Member of the CYP90C CYP450 family. Similar to Cytochrome P450 90C1 (ROT3).; "cytochrome P450, family 90, subfamily D, polypeptide 1" (CYP90D1); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, oxygen binding; INVOLVED IN: stamen development, petal development, leaf development, brassinosteroid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT4G36380.1); Has 27722 Blast hits to 27661 proteins in 1582 species: Archae - 80; Bacteria - 4717; Metazoa - 10119; Fungi - 4209; Plants - 7293; Viruses - 6; Other Eukaryotes - 1298 (source: NCBI BLink). & (q94iw5|c90d2_orysa : 636.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|35379 : 253.0) no description available & (gnl|cdd|32307 : 154.0) no description available & (reliability: 1272.0) & (original description: Putative CYP90D1, Description = 3-epi-6-deoxocathasterone 23-monooxygenase, PFAM = PF00067)' T '17.3.1.1.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.other' 'niben101scf05618_412337-416812' '(q69f95|c85a_phavu : 775.0) Cytochrome P450 85A (EC 1.14.-.-) (C6-oxidase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at5g38970 : 679.0) Encodes a polypeptide involved in the C-6 oxidation of brassinosteroids. Heterologous expression of the protein in yeast conferred the ability to catalyze multiple reactions in which the C-6 position of 6-deoxocastasterone, 6-deoxotyphasterol, 3-dehydro-6-deoxoteasterone and 6-deoxoteasterone are oxidized.; brassinosteroid-6-oxidase 1 (BR6OX1); FUNCTIONS IN: monooxygenase activity, oxygen binding; INVOLVED IN: brassinosteroid homeostasis, brassinosteroid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: fruit; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403); BEST Arabidopsis thaliana protein match is: brassinosteroid-6-oxidase 2 (TAIR:AT3G30180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35379 : 273.0) no description available & (gnl|cdd|84486 : 178.0) no description available & (reliability: 1350.0) & (original description: Putative CYP85A1, Description = Cytochrome P450 85A1, PFAM = PF00067)' T '17.3.1.1.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.other' 'niben101scf05764_438682-447370' '(at4g36380 : 605.0) Encodes a cytochrome P-450 gene that is involved in leaf blade expansion by controlling polar cell expansion in the leaf length direction. Member of the CYP90C CYP450 family. ROT3 was shown to be involved in brassinosteroid biosynthesis, most likely in the conversion step of typhasterol (TY) to castasterone (CS). As 6-deoxo-CS was unable to restore the phenotype of rot3-1, it has been postulated that ROT3 might be specifically involved in the conversion of TY to CS in the C6-oxidation pathway of brassinolide. Recently, CYP90C1 was shown to catalyse the C-23 hydroxylation of several brassinosteroids (the enzyme has a broad specificity for 22-hydroxylated substrates).; ROTUNDIFOLIA 3 (ROT3); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 90, subfamily D, polypeptide 1 (TAIR:AT3G13730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q94iw5|c90d2_orysa : 459.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|35379 : 263.0) no description available & (gnl|cdd|84486 : 173.0) no description available & (reliability: 1210.0) & (original description: Putative ROT3, Description = 3-epi-6-deoxocathasterone 23-monooxygenase, PFAM = PF00067)' T '17.3.1.1.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.other' 'niben101scf14390_191378-197460' '(q69f95|c85a_phavu : 725.0) Cytochrome P450 85A (EC 1.14.-.-) (C6-oxidase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at3g30180 : 649.0) Encodes a cytochrome p450 enzyme that catalyzes the last reaction in the production of brassinolide. It is capable of converting 6-deoxocastasterone into castasterone, a C-6 oxidation, as well as the further conversion of castasterone into brassinolide by a Baeyer-Villinger oxidation reaction at C-6, resulting in the formation of an unusual seven-membered lactone ring. The enzyme possesses high affinity for both C28- and C27-Brassinosteroids. The expression of the gene using a CYP85A2 promoter:LUC fusion construct was shown to be under circadian and light control.; brassinosteroid-6-oxidase 2 (BR6OX2); FUNCTIONS IN: monooxygenase activity, oxygen binding; INVOLVED IN: response to light stimulus, circadian rhythm, brassinosteroid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: brassinosteroid-6-oxidase 1 (TAIR:AT5G38970.1); Has 29372 Blast hits to 29308 proteins in 1622 species: Archae - 48; Bacteria - 4489; Metazoa - 10449; Fungi - 5456; Plants - 7735; Viruses - 3; Other Eukaryotes - 1192 (source: NCBI BLink). & (gnl|cdd|35379 : 271.0) no description available & (gnl|cdd|84486 : 181.0) no description available & (reliability: 1298.0) & (original description: Putative CYP85A1, Description = Cytochrome P450 85A1, PFAM = PF00067)' T '17.3.1.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols' '' '' '17.3.1.2.1' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.SMT1' '' '' '17.3.1.2.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.SMT2' 'nbv0.5scaffold196_940136-957055' '(at5g13710 : 504.0) SMT1 controls the level of cholesterol in plants; sterol methyltransferase 1 (SMT1); CONTAINS InterPro DOMAIN/s: Sterol methyltransferase C-terminal (InterPro:IPR013705), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: sterol methyltransferase 3 (TAIR:AT1G76090.1); Has 12253 Blast hits to 12250 proteins in 2286 species: Archae - 352; Bacteria - 8578; Metazoa - 91; Fungi - 457; Plants - 727; Viruses - 0; Other Eukaryotes - 2048 (source: NCBI BLink). & (q6zix2|smt1_orysa : 495.0) Cycloartenol-C-24-methyltransferase 1 (EC 2.1.1.41) (24-sterol C-methyltransferase 1) (Sterol C-methyltransferase 1) - Oryza sativa (Rice) & (gnl|cdd|36483 : 257.0) no description available & (gnl|cdd|71926 : 157.0) no description available & (reliability: 1008.0) & (original description: Putative SMT1, Description = Cycloartenol-C-24-methyltransferase, PFAM = PF08498;PF08241)' T '17.3.1.2.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.SMT2' 'niben101scf00634_494219-498095' '(at1g20330 : 619.0) Encodes a sterol-C24-methyltransferases involved in sterol biosynthesis. Mutants display altered sterol composition, serrated petals and sepals and altered cotyledon vascular patterning as well as ectopic endoreduplication. This suggests that suppression of endoreduplication is important for petal morphogenesis and that normal sterol composition is required for this suppression.; sterol methyltransferase 2 (SMT2); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity; INVOLVED IN: xylem and phloem pattern formation, negative regulation of DNA endoreduplication, multidimensional cell growth, sterol biosynthetic process, pattern specification process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sterol methyltransferase C-terminal (InterPro:IPR013705), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: sterol methyltransferase 3 (TAIR:AT1G76090.1); Has 13231 Blast hits to 13223 proteins in 2296 species: Archae - 440; Bacteria - 9200; Metazoa - 162; Fungi - 455; Plants - 664; Viruses - 0; Other Eukaryotes - 2310 (source: NCBI BLink). & (o82427|smt2_orysa : 559.0) 24-methylenesterol C-methyltransferase 2 (EC 2.1.1.143) (24-sterol C-methyltransferase 2) (Sterol-C-methyltransferase 2) - Oryza sativa (Rice) & (gnl|cdd|36483 : 323.0) no description available & (gnl|cdd|71926 : 167.0) no description available & (reliability: 1238.0) & (original description: Putative erg6, Description = Methyltransferase, PFAM = PF08241;PF08498)' T '17.3.1.2.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.SMT2' 'niben101scf00735_653805-671946' '(at5g13710 : 530.0) SMT1 controls the level of cholesterol in plants; sterol methyltransferase 1 (SMT1); CONTAINS InterPro DOMAIN/s: Sterol methyltransferase C-terminal (InterPro:IPR013705), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: sterol methyltransferase 3 (TAIR:AT1G76090.1); Has 12253 Blast hits to 12250 proteins in 2286 species: Archae - 352; Bacteria - 8578; Metazoa - 91; Fungi - 457; Plants - 727; Viruses - 0; Other Eukaryotes - 2048 (source: NCBI BLink). & (q6zix2|smt1_orysa : 520.0) Cycloartenol-C-24-methyltransferase 1 (EC 2.1.1.41) (24-sterol C-methyltransferase 1) (Sterol C-methyltransferase 1) - Oryza sativa (Rice) & (gnl|cdd|36483 : 269.0) no description available & (gnl|cdd|71926 : 189.0) no description available & (reliability: 1060.0) & (original description: Putative SMT1, Description = Cycloartenol-C-24-methyltransferase, PFAM = PF08241;PF08498)' T '17.3.1.2.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.SMT2' 'niben101scf00780_185717-188787' '(at1g20330 : 600.0) Encodes a sterol-C24-methyltransferases involved in sterol biosynthesis. Mutants display altered sterol composition, serrated petals and sepals and altered cotyledon vascular patterning as well as ectopic endoreduplication. This suggests that suppression of endoreduplication is important for petal morphogenesis and that normal sterol composition is required for this suppression.; sterol methyltransferase 2 (SMT2); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity; INVOLVED IN: xylem and phloem pattern formation, negative regulation of DNA endoreduplication, multidimensional cell growth, sterol biosynthetic process, pattern specification process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sterol methyltransferase C-terminal (InterPro:IPR013705), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: sterol methyltransferase 3 (TAIR:AT1G76090.1); Has 13231 Blast hits to 13223 proteins in 2296 species: Archae - 440; Bacteria - 9200; Metazoa - 162; Fungi - 455; Plants - 664; Viruses - 0; Other Eukaryotes - 2310 (source: NCBI BLink). & (o82427|smt2_orysa : 541.0) 24-methylenesterol C-methyltransferase 2 (EC 2.1.1.143) (24-sterol C-methyltransferase 2) (Sterol-C-methyltransferase 2) - Oryza sativa (Rice) & (gnl|cdd|36483 : 309.0) no description available & (gnl|cdd|71926 : 164.0) no description available & (reliability: 1200.0) & (original description: Putative erg6, Description = Methyltransferase, PFAM = PF08498;PF08241)' T '17.3.1.2.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.SMT2' 'niben101scf01718_763993-767063' '(at1g20330 : 634.0) Encodes a sterol-C24-methyltransferases involved in sterol biosynthesis. Mutants display altered sterol composition, serrated petals and sepals and altered cotyledon vascular patterning as well as ectopic endoreduplication. This suggests that suppression of endoreduplication is important for petal morphogenesis and that normal sterol composition is required for this suppression.; sterol methyltransferase 2 (SMT2); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity; INVOLVED IN: xylem and phloem pattern formation, negative regulation of DNA endoreduplication, multidimensional cell growth, sterol biosynthetic process, pattern specification process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sterol methyltransferase C-terminal (InterPro:IPR013705), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: sterol methyltransferase 3 (TAIR:AT1G76090.1); Has 13231 Blast hits to 13223 proteins in 2296 species: Archae - 440; Bacteria - 9200; Metazoa - 162; Fungi - 455; Plants - 664; Viruses - 0; Other Eukaryotes - 2310 (source: NCBI BLink). & (o82427|smt2_orysa : 558.0) 24-methylenesterol C-methyltransferase 2 (EC 2.1.1.143) (24-sterol C-methyltransferase 2) (Sterol-C-methyltransferase 2) - Oryza sativa (Rice) & (gnl|cdd|36483 : 330.0) no description available & (gnl|cdd|71926 : 177.0) no description available & (reliability: 1268.0) & (original description: Putative SMT2, Description = 24-methylenesterol C-methyltransferase 2, PFAM = PF08498;PF08241)' T '17.3.1.2.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.SMT2' 'niben101scf03085_519205-524231' '(q6zix2|smt1_orysa : 531.0) Cycloartenol-C-24-methyltransferase 1 (EC 2.1.1.41) (24-sterol C-methyltransferase 1) (Sterol C-methyltransferase 1) - Oryza sativa (Rice) & (at5g13710 : 528.0) SMT1 controls the level of cholesterol in plants; sterol methyltransferase 1 (SMT1); CONTAINS InterPro DOMAIN/s: Sterol methyltransferase C-terminal (InterPro:IPR013705), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: sterol methyltransferase 3 (TAIR:AT1G76090.1); Has 12253 Blast hits to 12250 proteins in 2286 species: Archae - 352; Bacteria - 8578; Metazoa - 91; Fungi - 457; Plants - 727; Viruses - 0; Other Eukaryotes - 2048 (source: NCBI BLink). & (gnl|cdd|36483 : 273.0) no description available & (gnl|cdd|71926 : 197.0) no description available & (reliability: 1056.0) & (original description: Putative smt1, Description = Delta(24)-sterol C-methyltransferase, PFAM = PF08241;PF08498)' T '17.3.1.2.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.SMT2' 'niben101scf13874_115584-128972' '(q6zix2|smt1_orysa : 565.0) Cycloartenol-C-24-methyltransferase 1 (EC 2.1.1.41) (24-sterol C-methyltransferase 1) (Sterol C-methyltransferase 1) - Oryza sativa (Rice) & (at5g13710 : 551.0) SMT1 controls the level of cholesterol in plants; sterol methyltransferase 1 (SMT1); CONTAINS InterPro DOMAIN/s: Sterol methyltransferase C-terminal (InterPro:IPR013705), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: sterol methyltransferase 3 (TAIR:AT1G76090.1); Has 12253 Blast hits to 12250 proteins in 2286 species: Archae - 352; Bacteria - 8578; Metazoa - 91; Fungi - 457; Plants - 727; Viruses - 0; Other Eukaryotes - 2048 (source: NCBI BLink). & (gnl|cdd|36483 : 297.0) no description available & (gnl|cdd|71926 : 208.0) no description available & (reliability: 1102.0) & (original description: Putative erg6, Description = Delta(24)-sterol C-methyltransferase, PFAM = PF08241;PF08498)' T '17.3.1.2.3' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.CYP51' 'niben044scf00011533ctg001_274-4664' '(at1g11680 : 786.0) putative obtusifoliol 14-alpha demethylase involved in sterol biosynthesis.; CYTOCHROME P450 51G1 (CYP51G1); FUNCTIONS IN: sterol 14-demethylase activity, oxygen binding; INVOLVED IN: sterol biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 4 (TAIR:AT3G19270.1); Has 30265 Blast hits to 30215 proteins in 1662 species: Archae - 71; Bacteria - 5605; Metazoa - 9913; Fungi - 5125; Plants - 8048; Viruses - 6; Other Eukaryotes - 1497 (source: NCBI BLink). & (p93846|cp51_sorbi : 759.0) Cytochrome P450 51 (EC 1.14.13.70) (CYPLI) (P450-LIA1) (Obtusifoliol 14-alpha demethylase) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (gnl|cdd|35903 : 544.0) no description available & (gnl|cdd|84486 : 187.0) no description available & (reliability: 1572.0) & (original description: Putative CYP51G1, Description = Sterol 14-demethylase, PFAM = PF00067)' T '17.3.1.2.3' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.CYP51' 'niben101scf09097_78038-82278' '(at1g11680 : 784.0) putative obtusifoliol 14-alpha demethylase involved in sterol biosynthesis.; CYTOCHROME P450 51G1 (CYP51G1); FUNCTIONS IN: sterol 14-demethylase activity, oxygen binding; INVOLVED IN: sterol biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 4 (TAIR:AT3G19270.1); Has 30265 Blast hits to 30215 proteins in 1662 species: Archae - 71; Bacteria - 5605; Metazoa - 9913; Fungi - 5125; Plants - 8048; Viruses - 6; Other Eukaryotes - 1497 (source: NCBI BLink). & (p93846|cp51_sorbi : 758.0) Cytochrome P450 51 (EC 1.14.13.70) (CYPLI) (P450-LIA1) (Obtusifoliol 14-alpha demethylase) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (gnl|cdd|35903 : 542.0) no description available & (gnl|cdd|84486 : 184.0) no description available & (reliability: 1568.0) & (original description: Putative CYP51G1, Description = Sterol 14-demethylase, PFAM = PF00067)' T '17.3.1.2.4' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.FACKEL' 'nbv0.5scaffold3838_10804-22853' '(at3g52940 : 491.0) Encodes a sterol C-14 reductase required for cell division and expansion and is involved in proper organization of the embryo.; FACKEL (FK); FUNCTIONS IN: delta14-sterol reductase activity; INVOLVED IN: sterol biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sterol reductase, conserved site (InterPro:IPR018083), Ergosterol biosynthesis ERG4/ERG24 (InterPro:IPR001171); BEST Arabidopsis thaliana protein match is: Ergosterol biosynthesis ERG4/ERG24 family (TAIR:AT1G50430.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36648 : 348.0) no description available & (gnl|cdd|85316 : 257.0) no description available & (reliability: 982.0) & (original description: Putative FK, Description = Delta(14)-sterol reductase, PFAM = PF01222)' T '17.3.1.2.4' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.FACKEL' 'niben101scf06769_405906-427086' '(at3g52940 : 492.0) Encodes a sterol C-14 reductase required for cell division and expansion and is involved in proper organization of the embryo.; FACKEL (FK); FUNCTIONS IN: delta14-sterol reductase activity; INVOLVED IN: sterol biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sterol reductase, conserved site (InterPro:IPR018083), Ergosterol biosynthesis ERG4/ERG24 (InterPro:IPR001171); BEST Arabidopsis thaliana protein match is: Ergosterol biosynthesis ERG4/ERG24 family (TAIR:AT1G50430.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36648 : 350.0) no description available & (gnl|cdd|85316 : 261.0) no description available & (reliability: 984.0) & (original description: Putative FK, Description = Delta(14)-sterol reductase, PFAM = PF01222)' T '17.3.1.2.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.HYD1' 'nbv0.3scaffold24472_3414-8053' '(q9ftz2|ebp_orysa : 232.0) Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase (EC 5.3.3.5) (Cholestenol Delta-isomerase) (Delta(8)-Delta(7) sterol isomerase) (D8-D7 sterol isomerase) - Oryza sativa (Rice) & (at1g20050 : 219.0) C-8 sterol isomerase; HYDRA1 (HYD1); FUNCTIONS IN: C-8 sterol isomerase activity; INVOLVED IN: sterol biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Emopamil-binding (InterPro:IPR007905); Has 377 Blast hits to 377 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 175; Plants - 59; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|86837 : 211.0) no description available & (gnl|cdd|40023 : 209.0) no description available & (reliability: 438.0) & (original description: Putative Os01g0103600, Description = Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase, PFAM = PF05241)' T '17.3.1.2.5' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.HYD1' 'niben101scf05961_234210-238675' '(q9ftz2|ebp_orysa : 233.0) Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase (EC 5.3.3.5) (Cholestenol Delta-isomerase) (Delta(8)-Delta(7) sterol isomerase) (D8-D7 sterol isomerase) - Oryza sativa (Rice) & (at1g20050 : 219.0) C-8 sterol isomerase; HYDRA1 (HYD1); FUNCTIONS IN: C-8 sterol isomerase activity; INVOLVED IN: sterol biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Emopamil-binding (InterPro:IPR007905); Has 377 Blast hits to 377 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 175; Plants - 59; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|86837 : 212.0) no description available & (gnl|cdd|40023 : 209.0) no description available & (reliability: 438.0) & (original description: Putative Os01g0103600, Description = Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase, PFAM = PF05241)' T '17.3.1.2.6' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF7' 'nbv0.3scaffold48406_10455-15177' '(q9zt29|sc5d_tobac : 509.0) Delta(7)-sterol-C5(6)-desaturase (EC 1.3.3.-) (Delta-7-C-5 sterol desaturase) (Delta(7)-sterol-C5-desaturase) - Nicotiana tabacum (Common tobacco) & (at3g02580 : 421.0) Brassinosteroid biosynthetic enzyme, catalyzes delta7 sterol C-5 desaturation step. Mutant has dwarf phenotype.; sterol 1 (STE1); FUNCTIONS IN: C-5 sterol desaturase activity; INVOLVED IN: sterol biosynthetic process, unidimensional cell growth, brassinosteroid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily protein (TAIR:AT3G02590.1); Has 2349 Blast hits to 2348 proteins in 461 species: Archae - 0; Bacteria - 570; Metazoa - 339; Fungi - 475; Plants - 329; Viruses - 0; Other Eukaryotes - 636 (source: NCBI BLink). & (gnl|cdd|36090 : 283.0) no description available & (reliability: 842.0) & (original description: Putative DWF7, Description = Delta(7)-sterol-C5(6)-desaturase, PFAM = PF04116)' T '17.3.1.2.6' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF7' 'niben101scf02381_731734-737269' '(q9zt29|sc5d_tobac : 510.0) Delta(7)-sterol-C5(6)-desaturase (EC 1.3.3.-) (Delta-7-C-5 sterol desaturase) (Delta(7)-sterol-C5-desaturase) - Nicotiana tabacum (Common tobacco) & (at3g02580 : 419.0) Brassinosteroid biosynthetic enzyme, catalyzes delta7 sterol C-5 desaturation step. Mutant has dwarf phenotype.; sterol 1 (STE1); FUNCTIONS IN: C-5 sterol desaturase activity; INVOLVED IN: sterol biosynthetic process, unidimensional cell growth, brassinosteroid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily protein (TAIR:AT3G02590.1); Has 2349 Blast hits to 2348 proteins in 461 species: Archae - 0; Bacteria - 570; Metazoa - 339; Fungi - 475; Plants - 329; Viruses - 0; Other Eukaryotes - 636 (source: NCBI BLink). & (gnl|cdd|36090 : 286.0) no description available & (reliability: 838.0) & (original description: Putative DWF7, Description = Delta(7)-sterol-C5(6)-desaturase, PFAM = PF04116)' T '17.3.1.2.6' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF7' 'niben101scf04570_589240-597325' '(q9zt29|sc5d_tobac : 473.0) Delta(7)-sterol-C5(6)-desaturase (EC 1.3.3.-) (Delta-7-C-5 sterol desaturase) (Delta(7)-sterol-C5-desaturase) - Nicotiana tabacum (Common tobacco) & (at3g02580 : 409.0) Brassinosteroid biosynthetic enzyme, catalyzes delta7 sterol C-5 desaturation step. Mutant has dwarf phenotype.; sterol 1 (STE1); FUNCTIONS IN: C-5 sterol desaturase activity; INVOLVED IN: sterol biosynthetic process, unidimensional cell growth, brassinosteroid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily protein (TAIR:AT3G02590.1); Has 2349 Blast hits to 2348 proteins in 461 species: Archae - 0; Bacteria - 570; Metazoa - 339; Fungi - 475; Plants - 329; Viruses - 0; Other Eukaryotes - 636 (source: NCBI BLink). & (gnl|cdd|36090 : 277.0) no description available & (reliability: 818.0) & (original description: Putative BnaA03g28020D, Description = BnaA03g28020D protein, PFAM = PF04116)' T '17.3.1.2.6' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF7' 'niben101scf07072_111879-117918' '(q9zt29|sc5d_tobac : 474.0) Delta(7)-sterol-C5(6)-desaturase (EC 1.3.3.-) (Delta-7-C-5 sterol desaturase) (Delta(7)-sterol-C5-desaturase) - Nicotiana tabacum (Common tobacco) & (at3g02580 : 414.0) Brassinosteroid biosynthetic enzyme, catalyzes delta7 sterol C-5 desaturation step. Mutant has dwarf phenotype.; sterol 1 (STE1); FUNCTIONS IN: C-5 sterol desaturase activity; INVOLVED IN: sterol biosynthetic process, unidimensional cell growth, brassinosteroid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily protein (TAIR:AT3G02590.1); Has 2349 Blast hits to 2348 proteins in 461 species: Archae - 0; Bacteria - 570; Metazoa - 339; Fungi - 475; Plants - 329; Viruses - 0; Other Eukaryotes - 636 (source: NCBI BLink). & (gnl|cdd|36090 : 280.0) no description available & (reliability: 828.0) & (original description: Putative DWF7, Description = Delta(7)-sterol-C5(6)-desaturase, PFAM = PF04116)' T '17.3.1.2.7' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF5' 'niben044scf00034356ctg004_9508-19891' '(at1g50430 : 599.0) Mutants are defective in Brassinosteroid biosynthesis (delta7-sterol-C7 reduction step) and have a dwarf phenotype.; DWARF 5 (DWF5); FUNCTIONS IN: sterol delta7 reductase activity; INVOLVED IN: sterol biosynthetic process, unidimensional cell growth, brassinosteroid biosynthetic process; LOCATED IN: integral to endoplasmic reticulum membrane, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sterol reductase, conserved site (InterPro:IPR018083), Ergosterol biosynthesis ERG4/ERG24 (InterPro:IPR001171); BEST Arabidopsis thaliana protein match is: Ergosterol biosynthesis ERG4/ERG24 family (TAIR:AT3G52940.1); Has 974 Blast hits to 971 proteins in 205 species: Archae - 0; Bacteria - 51; Metazoa - 266; Fungi - 402; Plants - 150; Viruses - 3; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|36648 : 349.0) no description available & (gnl|cdd|85316 : 184.0) no description available & (reliability: 1198.0) & (original description: Putative DWF5, Description = 7-dehydrocholesterol reductase, PFAM = PF01222;PF01222)' T '17.3.1.2.7' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF5' 'niben101scf06967_348624-358587' '(at1g50430 : 691.0) Mutants are defective in Brassinosteroid biosynthesis (delta7-sterol-C7 reduction step) and have a dwarf phenotype.; DWARF 5 (DWF5); FUNCTIONS IN: sterol delta7 reductase activity; INVOLVED IN: sterol biosynthetic process, unidimensional cell growth, brassinosteroid biosynthetic process; LOCATED IN: integral to endoplasmic reticulum membrane, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sterol reductase, conserved site (InterPro:IPR018083), Ergosterol biosynthesis ERG4/ERG24 (InterPro:IPR001171); BEST Arabidopsis thaliana protein match is: Ergosterol biosynthesis ERG4/ERG24 family (TAIR:AT3G52940.1); Has 974 Blast hits to 971 proteins in 205 species: Archae - 0; Bacteria - 51; Metazoa - 266; Fungi - 402; Plants - 150; Viruses - 3; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|36648 : 421.0) no description available & (gnl|cdd|85316 : 232.0) no description available & (reliability: 1382.0) & (original description: Putative DWF5, Description = 7-dehydrocholesterol reductase, PFAM = PF01222)' T '17.3.1.2.8' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF1' 'niben101scf00271_436855-440741' '(p93472|dim_pea : 903.0) Cell elongation protein diminuto - Pisum sativum (Garden pea) & (at3g19820 : 895.0) Involved in the conversion of the early brassinosteroid precursor 24-methylenecholesterol to campesterol. Brassinosteroids affect cellular elongation. Mutants have dwarf phenotype. DWF1 is a Ca2+-dependent calmodulin-binding protein.; DWARF 1 (DWF1); CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), FAD linked oxidase, N-terminal (InterPro:IPR006094). & (gnl|cdd|36476 : 736.0) no description available & (gnl|cdd|30625 : 83.4) no description available & (reliability: 1790.0) & (original description: Putative DIM, Description = Delta(24)-sterol reductase, PFAM = PF01565)' T '17.3.1.2.8' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF1' 'niben101scf02156_382672-386714' '(p93472|dim_pea : 977.0) Cell elongation protein diminuto - Pisum sativum (Garden pea) & (at3g19820 : 921.0) Involved in the conversion of the early brassinosteroid precursor 24-methylenecholesterol to campesterol. Brassinosteroids affect cellular elongation. Mutants have dwarf phenotype. DWF1 is a Ca2+-dependent calmodulin-binding protein.; DWARF 1 (DWF1); CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), FAD linked oxidase, N-terminal (InterPro:IPR006094). & (gnl|cdd|36476 : 746.0) no description available & (gnl|cdd|30625 : 80.7) no description available & (reliability: 1842.0) & (original description: Putative DIM, Description = Delta(24)-sterol reductase, PFAM = PF01565)' T '17.3.1.2.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.other' 'nbv0.3scaffold39285_4884-16164' '(gnl|cdd|35718 : 1158.0) no description available & (at1g78960 : 1000.0) Encodes a multifunctional 2-3-oxidosqualene (OS)-triterpene cyclase that can cyclize OS into lupeol, alpha- and beta-amyrin.; lupeol synthase 2 (LUP2); CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases family protein (TAIR:AT1G66960.1); Has 2115 Blast hits to 2006 proteins in 580 species: Archae - 2; Bacteria - 935; Metazoa - 110; Fungi - 239; Plants - 613; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|29791 : 837.0) no description available & (reliability: 1994.0) & (original description: Putative OSCBPW, Description = Lupeol synthase, PFAM = PF13249;PF13243)' T '17.3.1.2.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.other' 'niben044scf00020194ctg007_8217-13385' '(o48651|erg1_pangi : 798.0) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase) (SE) - Panax ginseng (Korean ginseng) & (at1g58440 : 794.0) Encodes a putative protein that has been speculated, based on sequence similarities, to have squalene monooxygenase activity.; XF1; FUNCTIONS IN: squalene monooxygenase activity; INVOLVED IN: response to water deprivation, sterol biosynthetic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Squalene epoxidase (InterPro:IPR013698); BEST Arabidopsis thaliana protein match is: squalene epoxidase 2 (TAIR:AT2G22830.1); Has 1994 Blast hits to 1990 proteins in 731 species: Archae - 43; Bacteria - 1249; Metazoa - 112; Fungi - 225; Plants - 178; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|36512 : 774.0) no description available & (gnl|cdd|71919 : 437.0) no description available & (reliability: 1588.0) & (original description: Putative sqp2, Description = Squalene monooxygenase, PFAM = PF13450;PF08491)' T '17.3.1.2.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.other' 'niben101scf00017_185506-201806' '(gnl|cdd|35718 : 1155.0) no description available & (at2g07050 : 1114.0) Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.; cycloartenol synthase 1 (CAS1); FUNCTIONS IN: cycloartenol synthase activity; INVOLVED IN: pentacyclic triterpenoid biosynthetic process, thylakoid membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lanosterol synthase 1 (TAIR:AT3G45130.1); Has 2063 Blast hits to 1929 proteins in 563 species: Archae - 2; Bacteria - 902; Metazoa - 86; Fungi - 243; Plants - 616; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|29791 : 854.0) no description available & (reliability: 2228.0) & (original description: Putative GgCAS1, Description = Cycloartenol synthase, PFAM = PF13243;PF13249)' T '17.3.1.2.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.other' 'niben101scf00314_208693-216561' '(at5g50375 : 418.0) Converts pentacyclic cyclopropyl sterols to conventional tetracyclic sterols. CPI1 function during and just after division and support gravitropism by establishing polar PIN2 localization. Required for endocytosis of PIN2; cyclopropyl isomerase (CPI1); FUNCTIONS IN: cycloeucalenol cycloisomerase activity; INVOLVED IN: pinocytosis, sterol biosynthetic process, positive gravitropism, cytokinesis; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cycloeucalenol cycloisomerase (InterPro:IPR020532). & (reliability: 836.0) & (original description: Putative CPI1, Description = Cycloeucalenol cycloisomerase, PFAM = )' T '17.3.1.2.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.other' 'niben101scf02836_328827-340340' '(gnl|cdd|35718 : 676.0) no description available & (at2g07050 : 612.0) Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.; cycloartenol synthase 1 (CAS1); FUNCTIONS IN: cycloartenol synthase activity; INVOLVED IN: pentacyclic triterpenoid biosynthetic process, thylakoid membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lanosterol synthase 1 (TAIR:AT3G45130.1); Has 2063 Blast hits to 1929 proteins in 563 species: Archae - 2; Bacteria - 902; Metazoa - 86; Fungi - 243; Plants - 616; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|29791 : 451.0) no description available & (reliability: 1224.0) & (original description: Putative bas1, Description = Terpene cyclase/mutase family member, PFAM = PF13249;PF13243)' T '17.3.1.2.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.other' 'niben101scf05431_29967-38632' '(gnl|cdd|36512 : 775.0) no description available & (o48651|erg1_pangi : 729.0) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase) (SE) - Panax ginseng (Korean ginseng) & (at4g37760 : 723.0) squalene epoxidase 3 (SQE3); FUNCTIONS IN: squalene monooxygenase activity; INVOLVED IN: response to jasmonic acid stimulus, response to wounding, sterol biosynthetic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Squalene epoxidase (InterPro:IPR013698), Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953); BEST Arabidopsis thaliana protein match is: squalene epoxidase 2 (TAIR:AT2G22830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71919 : 423.0) no description available & (reliability: 1446.0) & (original description: Putative sqp1, Description = Squalene epoxidase, PFAM = PF08491;PF13450)' T '17.3.1.2.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.other' 'niben101scf08080_22342-28396' '(at2g07050 : 158.0) Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.; cycloartenol synthase 1 (CAS1); FUNCTIONS IN: cycloartenol synthase activity; INVOLVED IN: pentacyclic triterpenoid biosynthetic process, thylakoid membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lanosterol synthase 1 (TAIR:AT3G45130.1); Has 2063 Blast hits to 1929 proteins in 563 species: Archae - 2; Bacteria - 902; Metazoa - 86; Fungi - 243; Plants - 616; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|35718 : 156.0) no description available & (gnl|cdd|29791 : 122.0) no description available & (reliability: 316.0) & (original description: Putative bas1, Description = Terpene cyclase/mutase family member, PFAM = PF13243)' T '17.3.1.2.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.other' 'niben101scf16532_80911-109776' '(at2g07050 : 1298.0) Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.; cycloartenol synthase 1 (CAS1); FUNCTIONS IN: cycloartenol synthase activity; INVOLVED IN: pentacyclic triterpenoid biosynthetic process, thylakoid membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lanosterol synthase 1 (TAIR:AT3G45130.1); Has 2063 Blast hits to 1929 proteins in 563 species: Archae - 2; Bacteria - 902; Metazoa - 86; Fungi - 243; Plants - 616; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|35718 : 1194.0) no description available & (gnl|cdd|29791 : 878.0) no description available & (reliability: 2596.0) & (original description: Putative bAS1, Description = Terpene cyclase/mutase family member, PFAM = PF13243;PF13249)' T '17.3.1.2.99' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.other' 'niben101scf24355_36205-41170' '(o48651|erg1_pangi : 805.0) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase) (SE) - Panax ginseng (Korean ginseng) & (at1g58440 : 797.0) Encodes a putative protein that has been speculated, based on sequence similarities, to have squalene monooxygenase activity.; XF1; FUNCTIONS IN: squalene monooxygenase activity; INVOLVED IN: response to water deprivation, sterol biosynthetic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Squalene epoxidase (InterPro:IPR013698); BEST Arabidopsis thaliana protein match is: squalene epoxidase 2 (TAIR:AT2G22830.1); Has 1994 Blast hits to 1990 proteins in 731 species: Archae - 43; Bacteria - 1249; Metazoa - 112; Fungi - 225; Plants - 178; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|36512 : 776.0) no description available & (gnl|cdd|71919 : 439.0) no description available & (reliability: 1594.0) & (original description: Putative sqp1, Description = Squalene epoxidase, PFAM = PF08491;PF13450)' T '17.3.1.1001' 'hormone metabolism.brassinosteroid.synthesis-degradation' '22(s),23(s)-homobrassinolide' 'hormone metabolism.brassinosteroid' M '17.3.1.1002' 'hormone metabolism.brassinosteroid.synthesis-degradation' '24-epibrassinolide' 'hormone metabolism.brassinosteroid' M '17.3.1.1003' 'hormone metabolism.brassinosteroid.synthesis-degradation' '24-epicastasterone' 'hormone metabolism.brassinosteroid' M '17.3.1.1004' 'hormone metabolism.brassinosteroid.synthesis-degradation' '28-homocastasteroneÍ ' 'hormone metabolism.brassinosteroid' M '17.3.1.1005' 'hormone metabolism.brassinosteroid.synthesis-degradation' 'brassinolide' 'hormone metabolism.brassinosteroid' M '17.3.1.1006' 'hormone metabolism.brassinosteroid.synthesis-degradation' 'castasterone' 'hormone metabolism.brassinosteroid' M '17.3.2' 'hormone metabolism.brassinosteroid.signal transduction' '' '' '17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'nbv0.3scaffold28118_17335-21958' '(at3g51740 : 963.0) encodes a leucine-repeat receptor kinase expressed in inflorescence meristem. Locus association was made from performing sequence analysis with IMK3 (MRLK) whose locus association was provided by the authors.; inflorescence meristem receptor-like kinase 2 (IMK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cell wall, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: meristematic receptor-like kinase (TAIR:AT3G56100.1); Has 188484 Blast hits to 128319 proteins in 4033 species: Archae - 136; Bacteria - 17470; Metazoa - 63423; Fungi - 9529; Plants - 75715; Viruses - 437; Other Eukaryotes - 21774 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 303.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 263.0) no description available & (gnl|cdd|29142 : 155.0) no description available & (reliability: 1926.0) & (original description: Putative IMK2, Description = Probably inactive leucine-rich repeat receptor-like protein kinase IMK2, PFAM = PF07714;PF13855;PF13855;PF08263)' T '17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'nbv0.3scaffold94350_26-4779' '(at4g39400 : 1339.0) Encodes a plasma membrane localized leucine-rich repeat receptor kinase involved in brassinosteroid signal transduction. BRI1 ligand is brassinolide which binds at the extracellular domain. Binding results in phosphorylation of the kinase domain which activates the BRI1 protein leading to BR responses. Residue T-1049 and either S-1044 or T-1045 were essential for kinase function in vitro and normal BRI1 signaling in planta. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1 appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through its effects on FLC expression levels, as uncovered by double mutant analyses. This most likely occurs as a result of BRI1-dependent effects on histone acetylation, but not histone triMeH3K4 methylation, at the FLC locus.; BRASSINOSTEROID INSENSITIVE 1 (BRI1); FUNCTIONS IN: in 6 functions; INVOLVED IN: in 9 processes; LOCATED IN: endosome, plasma membrane, protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: BRI1 like (TAIR:AT1G55610.2); Has 214988 Blast hits to 139206 proteins in 4645 species: Archae - 193; Bacteria - 21464; Metazoa - 65624; Fungi - 10774; Plants - 90532; Viruses - 410; Other Eukaryotes - 25991 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 418.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 330.0) no description available & (gnl|cdd|87344 : 166.0) no description available & (reliability: 2678.0) & (original description: Putative CURL3, Description = Brassinosteroid LRR receptor kinase, PFAM = PF08263;PF13516;PF13516;PF13855;PF13855;PF13855;PF13855;PF00069)' T '17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben044scf00011255ctg003_1187-6700' '(at2g01950 : 1434.0) Encodes a leucine rich repeat receptor kinase and associated with provascular/procambial cells. Similar to BRI, brassinosteroid receptor protein.; BRI1-like 2 (BRL2); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: BRI1 like (TAIR:AT1G55610.2); Has 216585 Blast hits to 138440 proteins in 4665 species: Archae - 155; Bacteria - 20149; Metazoa - 71991; Fungi - 10737; Plants - 87183; Viruses - 376; Other Eukaryotes - 25994 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 454.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 326.0) no description available & (gnl|cdd|87344 : 165.0) no description available & (reliability: 2868.0) & (original description: Putative BRL2, Description = Serine/threonine-protein kinase BRI1-like 2, PFAM = PF08263;PF13855;PF13855;PF13855;PF00069)' T '17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben044scf00028720ctg007_3282-8205' '(at1g55610 : 1425.0) mutant has Altered vascular cell differentiation; LRR Receptor Kinase; BRI1 like (BRL1); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: BRI1-like 3 (TAIR:AT3G13380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 442.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 337.0) no description available & (gnl|cdd|47549 : 165.0) no description available & (reliability: 2772.0) & (original description: Putative BRL1, Description = Serine/threonine-protein kinase BRI1-like 1, PFAM = PF00560;PF00069;PF13516;PF13516;PF13855;PF13855;PF08263)' T '17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben044scf00052552ctg000_24-5048' '(at4g39400 : 1338.0) Encodes a plasma membrane localized leucine-rich repeat receptor kinase involved in brassinosteroid signal transduction. BRI1 ligand is brassinolide which binds at the extracellular domain. Binding results in phosphorylation of the kinase domain which activates the BRI1 protein leading to BR responses. Residue T-1049 and either S-1044 or T-1045 were essential for kinase function in vitro and normal BRI1 signaling in planta. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1 appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through its effects on FLC expression levels, as uncovered by double mutant analyses. This most likely occurs as a result of BRI1-dependent effects on histone acetylation, but not histone triMeH3K4 methylation, at the FLC locus.; BRASSINOSTEROID INSENSITIVE 1 (BRI1); FUNCTIONS IN: in 6 functions; INVOLVED IN: in 9 processes; LOCATED IN: endosome, plasma membrane, protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: BRI1 like (TAIR:AT1G55610.2); Has 214988 Blast hits to 139206 proteins in 4645 species: Archae - 193; Bacteria - 21464; Metazoa - 65624; Fungi - 10774; Plants - 90532; Viruses - 410; Other Eukaryotes - 25991 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 422.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 330.0) no description available & (gnl|cdd|87344 : 167.0) no description available & (reliability: 2676.0) & (original description: Putative CURL3, Description = Brassinosteroid LRR receptor kinase, PFAM = PF13516;PF13855;PF13855;PF13855;PF13855;PF13855;PF00069;PF08263;PF00560)' T '17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben101scf00245_77654-83401' '(at1g74360 : 1223.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: BRI1 like (TAIR:AT1G55610.2); Has 217966 Blast hits to 139933 proteins in 5038 species: Archae - 191; Bacteria - 21618; Metazoa - 66649; Fungi - 11025; Plants - 92428; Viruses - 434; Other Eukaryotes - 25621 (source: NCBI BLink). & (gnl|cdd|36401 : 308.0) no description available & (p93194|rpk1_iponi : 229.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|47549 : 168.0) no description available & (reliability: 2446.0) & (original description: Putative At1g74360, Description = Probable LRR receptor-like serine/threonine-protein kinase At1g74360, PFAM = PF00069;PF08263;PF13516;PF13855)' T '17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben101scf01237_742535-747513' '(at3g51740 : 750.0) encodes a leucine-repeat receptor kinase expressed in inflorescence meristem. Locus association was made from performing sequence analysis with IMK3 (MRLK) whose locus association was provided by the authors.; inflorescence meristem receptor-like kinase 2 (IMK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cell wall, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: meristematic receptor-like kinase (TAIR:AT3G56100.1); Has 188484 Blast hits to 128319 proteins in 4033 species: Archae - 136; Bacteria - 17470; Metazoa - 63423; Fungi - 9529; Plants - 75715; Viruses - 437; Other Eukaryotes - 21774 (source: NCBI BLink). & (gnl|cdd|36401 : 260.0) no description available & (q8lpb4|pskr_dauca : 254.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 150.0) no description available & (reliability: 1500.0) & (original description: Putative rhg1g, Description = Probably inactive leucine-rich repeat receptor-like protein kinase IMK2, PFAM = PF13855;PF13855;PF07714;PF08263)' T '17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben101scf01297_161248-165872' '(at3g51740 : 955.0) encodes a leucine-repeat receptor kinase expressed in inflorescence meristem. Locus association was made from performing sequence analysis with IMK3 (MRLK) whose locus association was provided by the authors.; inflorescence meristem receptor-like kinase 2 (IMK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cell wall, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: meristematic receptor-like kinase (TAIR:AT3G56100.1); Has 188484 Blast hits to 128319 proteins in 4033 species: Archae - 136; Bacteria - 17470; Metazoa - 63423; Fungi - 9529; Plants - 75715; Viruses - 437; Other Eukaryotes - 21774 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 303.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 263.0) no description available & (gnl|cdd|29142 : 158.0) no description available & (reliability: 1910.0) & (original description: Putative IMK2, Description = Probably inactive leucine-rich repeat receptor-like protein kinase IMK2, PFAM = PF00560;PF07714;PF13855;PF13855;PF08263)' T '17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben101scf01683_1159229-1164870' '(at4g39400 : 1342.0) Encodes a plasma membrane localized leucine-rich repeat receptor kinase involved in brassinosteroid signal transduction. BRI1 ligand is brassinolide which binds at the extracellular domain. Binding results in phosphorylation of the kinase domain which activates the BRI1 protein leading to BR responses. Residue T-1049 and either S-1044 or T-1045 were essential for kinase function in vitro and normal BRI1 signaling in planta. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1 appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through its effects on FLC expression levels, as uncovered by double mutant analyses. This most likely occurs as a result of BRI1-dependent effects on histone acetylation, but not histone triMeH3K4 methylation, at the FLC locus.; BRASSINOSTEROID INSENSITIVE 1 (BRI1); FUNCTIONS IN: in 6 functions; INVOLVED IN: in 9 processes; LOCATED IN: endosome, plasma membrane, protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: BRI1 like (TAIR:AT1G55610.2); Has 214988 Blast hits to 139206 proteins in 4645 species: Archae - 193; Bacteria - 21464; Metazoa - 65624; Fungi - 10774; Plants - 90532; Viruses - 410; Other Eukaryotes - 25991 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 419.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 330.0) no description available & (gnl|cdd|87344 : 166.0) no description available & (reliability: 2684.0) & (original description: Putative CURL3, Description = Brassinosteroid LRR receptor kinase, PFAM = PF13516;PF13516;PF13855;PF13855;PF13855;PF13855;PF00069;PF08263)' T '17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben101scf02174_15095-17589' '(at4g08850 : 136.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein with leucine-rich repeat domain (TAIR:AT1G35710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 120.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 258.0) & (original description: Putative PGSC0003DMG400004164, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855)' T '17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben101scf04292_53198-57721' '(at3g51740 : 785.0) encodes a leucine-repeat receptor kinase expressed in inflorescence meristem. Locus association was made from performing sequence analysis with IMK3 (MRLK) whose locus association was provided by the authors.; inflorescence meristem receptor-like kinase 2 (IMK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cell wall, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: meristematic receptor-like kinase (TAIR:AT3G56100.1); Has 188484 Blast hits to 128319 proteins in 4033 species: Archae - 136; Bacteria - 17470; Metazoa - 63423; Fungi - 9529; Plants - 75715; Viruses - 437; Other Eukaryotes - 21774 (source: NCBI BLink). & (gnl|cdd|36401 : 272.0) no description available & (q8lpb4|pskr_dauca : 176.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 159.0) no description available & (reliability: 1570.0) & (original description: Putative IMK3, Description = Probable leucine-rich repeat receptor-like protein kinase IMK3, PFAM = PF13855;PF08263;PF07714;PF00560)' T '17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben101scf05928_479005-484724' '(at1g74360 : 1271.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: BRI1 like (TAIR:AT1G55610.2); Has 217966 Blast hits to 139933 proteins in 5038 species: Archae - 191; Bacteria - 21618; Metazoa - 66649; Fungi - 11025; Plants - 92428; Viruses - 434; Other Eukaryotes - 25621 (source: NCBI BLink). & (p93194|rpk1_iponi : 368.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 324.0) no description available & (gnl|cdd|29142 : 174.0) no description available & (reliability: 2542.0) & (original description: Putative At1g74360, Description = Probable LRR receptor-like serine/threonine-protein kinase At1g74360, PFAM = PF13516;PF13516;PF00069;PF08263;PF13855;PF13855)' T '17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben101scf08832_13787-20209' '(at4g18710 : 729.0) ATSK (shaggy-like kinase) family member that encodes an AtSK protein involved in the cross-talk between auxin and brassinosteroid signaling pathways. BR-INSENSITIVE 2 mutant indicated that the BR-insensitive dwarf phenotype was due to a semidominant mutation in the BIN2. BIN2 is not allelic to BRI1. BIN2-mediated phosphorylation appears to promote BZR1 export from the nucleus.; BRASSINOSTEROID-INSENSITIVE 2 (BIN2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: GSK3/SHAGGY-like protein kinase 1 (TAIR:AT1G06390.2). & (q40518|msk1_tobac : 634.0) Shaggy-related protein kinase NtK-1 (EC 2.7.11.1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35877 : 574.0) no description available & (gnl|cdd|29142 : 228.0) no description available & (reliability: 1458.0) & (original description: Putative GSK3B, Description = Glycogen synthase kinase 3 beta variant 4, PFAM = PF00069)' T '17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben101scf09082_38306-44213' '(at2g30980 : 717.0) Encodes a GSK3-like protein kinase. This protein can interact with the BZR1 protein involved in brassinosteroid-mediated signaling in a Y2H assay and promotes BZR1 phosphorylation in protoplasts.; SHAGGY-related protein kinase dZeta (SKdZeta); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: brassinosteroid mediated signaling pathway, protein amino acid phosphorylation, regulation of protein localization; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: GSK3/SHAGGY-like protein kinase 1 (TAIR:AT1G06390.2); Has 110013 Blast hits to 108778 proteins in 3905 species: Archae - 83; Bacteria - 10808; Metazoa - 40209; Fungi - 11817; Plants - 28363; Viruses - 415; Other Eukaryotes - 18318 (source: NCBI BLink). & (q40518|msk1_tobac : 637.0) Shaggy-related protein kinase NtK-1 (EC 2.7.11.1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35877 : 575.0) no description available & (gnl|cdd|29142 : 232.0) no description available & (reliability: 1434.0) & (original description: Putative ASK9, Description = Shaggy-related protein kinase iota, PFAM = PF00069)' T '17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben101scf12866_59404-62225' '(at2g25790 : 131.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT4G28650.1); Has 153683 Blast hits to 57628 proteins in 1967 species: Archae - 59; Bacteria - 14832; Metazoa - 38909; Fungi - 1966; Plants - 84929; Viruses - 21; Other Eukaryotes - 12967 (source: NCBI BLink). & (p93194|rpk1_iponi : 108.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 92.4) no description available & (reliability: 244.0) & (original description: Putative BnaCnng18680D, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF13855)' T '17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben101scf12866_122962-129415' '(at4g18710 : 740.0) ATSK (shaggy-like kinase) family member that encodes an AtSK protein involved in the cross-talk between auxin and brassinosteroid signaling pathways. BR-INSENSITIVE 2 mutant indicated that the BR-insensitive dwarf phenotype was due to a semidominant mutation in the BIN2. BIN2 is not allelic to BRI1. BIN2-mediated phosphorylation appears to promote BZR1 export from the nucleus.; BRASSINOSTEROID-INSENSITIVE 2 (BIN2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: GSK3/SHAGGY-like protein kinase 1 (TAIR:AT1G06390.2). & (q40518|msk1_tobac : 641.0) Shaggy-related protein kinase NtK-1 (EC 2.7.11.1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35877 : 581.0) no description available & (gnl|cdd|29142 : 232.0) no description available & (reliability: 1480.0) & (original description: Putative ASK7, Description = Shaggy-related protein kinase eta, PFAM = PF00069)' T '17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben101scf13404_24319-31077' '(at4g39400 : 1330.0) Encodes a plasma membrane localized leucine-rich repeat receptor kinase involved in brassinosteroid signal transduction. BRI1 ligand is brassinolide which binds at the extracellular domain. Binding results in phosphorylation of the kinase domain which activates the BRI1 protein leading to BR responses. Residue T-1049 and either S-1044 or T-1045 were essential for kinase function in vitro and normal BRI1 signaling in planta. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1 appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through its effects on FLC expression levels, as uncovered by double mutant analyses. This most likely occurs as a result of BRI1-dependent effects on histone acetylation, but not histone triMeH3K4 methylation, at the FLC locus.; BRASSINOSTEROID INSENSITIVE 1 (BRI1); FUNCTIONS IN: in 6 functions; INVOLVED IN: in 9 processes; LOCATED IN: endosome, plasma membrane, protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: BRI1 like (TAIR:AT1G55610.2); Has 214988 Blast hits to 139206 proteins in 4645 species: Archae - 193; Bacteria - 21464; Metazoa - 65624; Fungi - 10774; Plants - 90532; Viruses - 410; Other Eukaryotes - 25991 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 427.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 331.0) no description available & (gnl|cdd|87344 : 167.0) no description available & (reliability: 2660.0) & (original description: Putative BRI1, Description = Brassinosteroid insensitive 1, PFAM = PF13855;PF13855;PF13855;PF13855;PF13855;PF08263;PF00560;PF13516;PF00069)' T '17.3.2.1' 'hormone metabolism.brassinosteroid.signal transduction.BRI' 'niben101scf13478_10419-15937' '(at2g01950 : 1424.0) Encodes a leucine rich repeat receptor kinase and associated with provascular/procambial cells. Similar to BRI, brassinosteroid receptor protein.; BRI1-like 2 (BRL2); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: BRI1 like (TAIR:AT1G55610.2); Has 216585 Blast hits to 138440 proteins in 4665 species: Archae - 155; Bacteria - 20149; Metazoa - 71991; Fungi - 10737; Plants - 87183; Viruses - 376; Other Eukaryotes - 25994 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 377.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 322.0) no description available & (gnl|cdd|87344 : 164.0) no description available & (reliability: 2848.0) & (original description: Putative BRL2, Description = Serine/threonine-protein kinase BRI1-like 2, PFAM = PF13516;PF13855;PF13855;PF00560;PF00069;PF08263)' T '17.3.2.2' 'hormone metabolism.brassinosteroid.signal transduction.BZR' 'nbv0.5scaffold15_134780-139782' '(at1g78700 : 288.0) BES1/BZR1 homolog 4 (BEH4); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: BES1/BZR1 homolog 3 (TAIR:AT4G18890.1); Has 3228 Blast hits to 573 proteins in 95 species: Archae - 0; Bacteria - 18; Metazoa - 254; Fungi - 109; Plants - 296; Viruses - 0; Other Eukaryotes - 2551 (source: NCBI BLink). & (gnl|cdd|69223 : 180.0) no description available & (reliability: 576.0) & (original description: Putative BEH4, Description = BES1/BZR1 homolog protein 4, PFAM = PF05687)' T '17.3.2.2' 'hormone metabolism.brassinosteroid.signal transduction.BZR' 'nbv0.5scaffold389_539354-543939' '(at1g75080 : 241.0) Encodes a positive regulator of the brassinosteroid (BR) signalling pathway that mediates both downstream BR responses and negative feedback regulation of BR biosynthesis. There is evidence for phosphorylation-dependent nucleocytoplasmic shuttling of BZR1. GSK3-like kinases (including BIN2), 14-3-3 proteins, and the phosphatase BSU1 seem to participate in this process. Phosphorylation also appears to affect BZR1's transcriptional activities.; BRASSINAZOLE-RESISTANT 1 (BZR1); CONTAINS InterPro DOMAIN/s: BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: Brassinosteroid signalling positive regulator (BZR1) family protein (TAIR:AT1G19350.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69223 : 147.0) no description available & (reliability: 482.0) & (original description: Putative BZR1, Description = Protein BRASSINAZOLE-RESISTANT 1, PFAM = PF05687)' T '17.3.2.2' 'hormone metabolism.brassinosteroid.signal transduction.BZR' 'niben044scf00011108ctg010_1-5588' '(at1g78700 : 265.0) BES1/BZR1 homolog 4 (BEH4); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: BES1/BZR1 homolog 3 (TAIR:AT4G18890.1); Has 3228 Blast hits to 573 proteins in 95 species: Archae - 0; Bacteria - 18; Metazoa - 254; Fungi - 109; Plants - 296; Viruses - 0; Other Eukaryotes - 2551 (source: NCBI BLink). & (gnl|cdd|69223 : 174.0) no description available & (reliability: 530.0) & (original description: Putative BEH4, Description = BES1/BZR1 homolog protein 4, PFAM = PF05687)' T '17.3.2.2' 'hormone metabolism.brassinosteroid.signal transduction.BZR' 'niben044scf00014938ctg002_9948-13213' '(at1g75080 : 251.0) Encodes a positive regulator of the brassinosteroid (BR) signalling pathway that mediates both downstream BR responses and negative feedback regulation of BR biosynthesis. There is evidence for phosphorylation-dependent nucleocytoplasmic shuttling of BZR1. GSK3-like kinases (including BIN2), 14-3-3 proteins, and the phosphatase BSU1 seem to participate in this process. Phosphorylation also appears to affect BZR1's transcriptional activities.; BRASSINAZOLE-RESISTANT 1 (BZR1); CONTAINS InterPro DOMAIN/s: BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: Brassinosteroid signalling positive regulator (BZR1) family protein (TAIR:AT1G19350.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69223 : 187.0) no description available & (reliability: 502.0) & (original description: Putative BZR1, Description = Protein BRASSINAZOLE-RESISTANT 1, PFAM = PF05687)' T '17.3.2.2' 'hormone metabolism.brassinosteroid.signal transduction.BZR' 'niben101scf00073_538402-545329' '(at1g78700 : 266.0) BES1/BZR1 homolog 4 (BEH4); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: BES1/BZR1 homolog 3 (TAIR:AT4G18890.1); Has 3228 Blast hits to 573 proteins in 95 species: Archae - 0; Bacteria - 18; Metazoa - 254; Fungi - 109; Plants - 296; Viruses - 0; Other Eukaryotes - 2551 (source: NCBI BLink). & (gnl|cdd|69223 : 177.0) no description available & (reliability: 532.0) & (original description: Putative BEH4, Description = BES1/BZR1 homolog protein 4, PFAM = PF05687)' T '17.3.2.2' 'hormone metabolism.brassinosteroid.signal transduction.BZR' 'niben101scf00219_602899-607050' '(at1g75080 : 248.0) Encodes a positive regulator of the brassinosteroid (BR) signalling pathway that mediates both downstream BR responses and negative feedback regulation of BR biosynthesis. There is evidence for phosphorylation-dependent nucleocytoplasmic shuttling of BZR1. GSK3-like kinases (including BIN2), 14-3-3 proteins, and the phosphatase BSU1 seem to participate in this process. Phosphorylation also appears to affect BZR1's transcriptional activities.; BRASSINAZOLE-RESISTANT 1 (BZR1); CONTAINS InterPro DOMAIN/s: BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: Brassinosteroid signalling positive regulator (BZR1) family protein (TAIR:AT1G19350.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69223 : 183.0) no description available & (reliability: 496.0) & (original description: Putative BZR1, Description = Protein BRASSINAZOLE-RESISTANT 1, PFAM = PF05687)' T '17.3.2.2' 'hormone metabolism.brassinosteroid.signal transduction.BZR' 'niben101scf00894_477-4422' '(at1g19350 : 223.0) Encodes brassinosteroid (BR) signalling protein that accumulates in the nucleus as dephosphorylated form in response to BRs. Is phosphorylated by the BIN2 GSK3 kinase. It synergistically interacts with BIM1 to bind to E box sequences (CANNTG). The protein contains a nuclear localization signal (NLS), followed by a highly conserved amino-terminal domain (N) shared by all family members, a BIN2 phosphorylation domain (P), a PEST motif, involved in protein degradation in the absence of BR, and a carboxyl-terminal domain. BES1 can interact with the ELF6 and REF6 Jumonji N/C-domain containing proteins and may direct them to modify histone methylation upstream of some brassinosteroid responsive-genes; BRI1-EMS-SUPPRESSOR 1 (BES1); CONTAINS InterPro DOMAIN/s: BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: Brassinosteroid signalling positive regulator (BZR1) family protein (TAIR:AT1G75080.2); Has 2916 Blast hits to 477 proteins in 80 species: Archae - 0; Bacteria - 14; Metazoa - 122; Fungi - 71; Plants - 275; Viruses - 0; Other Eukaryotes - 2434 (source: NCBI BLink). & (gnl|cdd|69223 : 185.0) no description available & (reliability: 446.0) & (original description: Putative BEH2, Description = BES1/BZR1 homolog protein 2, PFAM = PF05687)' T '17.3.2.2' 'hormone metabolism.brassinosteroid.signal transduction.BZR' 'niben101scf03110_623107-626863' '(at1g75080 : 234.0) Encodes a positive regulator of the brassinosteroid (BR) signalling pathway that mediates both downstream BR responses and negative feedback regulation of BR biosynthesis. There is evidence for phosphorylation-dependent nucleocytoplasmic shuttling of BZR1. GSK3-like kinases (including BIN2), 14-3-3 proteins, and the phosphatase BSU1 seem to participate in this process. Phosphorylation also appears to affect BZR1's transcriptional activities.; BRASSINAZOLE-RESISTANT 1 (BZR1); CONTAINS InterPro DOMAIN/s: BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: Brassinosteroid signalling positive regulator (BZR1) family protein (TAIR:AT1G19350.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69223 : 177.0) no description available & (reliability: 468.0) & (original description: Putative BZR1, Description = Protein BRASSINAZOLE-RESISTANT 1, PFAM = PF05687)' T '17.3.2.2' 'hormone metabolism.brassinosteroid.signal transduction.BZR' 'niben101scf04132_171063-179239' '(at1g78700 : 312.0) BES1/BZR1 homolog 4 (BEH4); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: BES1/BZR1 homolog 3 (TAIR:AT4G18890.1); Has 3228 Blast hits to 573 proteins in 95 species: Archae - 0; Bacteria - 18; Metazoa - 254; Fungi - 109; Plants - 296; Viruses - 0; Other Eukaryotes - 2551 (source: NCBI BLink). & (gnl|cdd|69223 : 174.0) no description available & (reliability: 624.0) & (original description: Putative BEH4, Description = BES1/BZR1 homolog protein 4, PFAM = PF05687)' T '17.3.2.2' 'hormone metabolism.brassinosteroid.signal transduction.BZR' 'niben101scf10887_125261-128147' '(gnl|cdd|69223 : 117.0) no description available & (at1g19350 : 82.0) Encodes brassinosteroid (BR) signalling protein that accumulates in the nucleus as dephosphorylated form in response to BRs. Is phosphorylated by the BIN2 GSK3 kinase. It synergistically interacts with BIM1 to bind to E box sequences (CANNTG). The protein contains a nuclear localization signal (NLS), followed by a highly conserved amino-terminal domain (N) shared by all family members, a BIN2 phosphorylation domain (P), a PEST motif, involved in protein degradation in the absence of BR, and a carboxyl-terminal domain. BES1 can interact with the ELF6 and REF6 Jumonji N/C-domain containing proteins and may direct them to modify histone methylation upstream of some brassinosteroid responsive-genes; BRI1-EMS-SUPPRESSOR 1 (BES1); CONTAINS InterPro DOMAIN/s: BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: Brassinosteroid signalling positive regulator (BZR1) family protein (TAIR:AT1G75080.2); Has 2916 Blast hits to 477 proteins in 80 species: Archae - 0; Bacteria - 14; Metazoa - 122; Fungi - 71; Plants - 275; Viruses - 0; Other Eukaryotes - 2434 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative BAM7, Description = Brassinazole-resistant 1 protein, PFAM = PF05687)' T '17.3.2.2' 'hormone metabolism.brassinosteroid.signal transduction.BZR' 'niben101scf12841_314844-319852' '(at1g78700 : 286.0) BES1/BZR1 homolog 4 (BEH4); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: BES1/BZR1 homolog 3 (TAIR:AT4G18890.1); Has 3228 Blast hits to 573 proteins in 95 species: Archae - 0; Bacteria - 18; Metazoa - 254; Fungi - 109; Plants - 296; Viruses - 0; Other Eukaryotes - 2551 (source: NCBI BLink). & (gnl|cdd|69223 : 178.0) no description available & (reliability: 572.0) & (original description: Putative BEH4, Description = BES1/BZR1 homolog protein 4, PFAM = PF05687)' T '17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'nbv0.3scaffold4422_59217-68778' '(at4g33430 : 910.0) Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1 and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome.; BRI1-associated receptor kinase (BAK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: somatic embryogenesis receptor-like kinase 4 (TAIR:AT2G13790.1). & (gnl|cdd|36401 : 354.0) no description available & (q8lkz1|nork_pea : 236.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 168.0) no description available & (reliability: 1820.0) & (original description: Putative BAK1, Description = BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, PFAM = PF08263;PF00069)' T '17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'nbv0.5scaffold4223_194982-201970' '(gnl|cdd|36496 : 484.0) no description available & (gnl|cdd|84781 : 462.0) no description available & (p52711|cbp23_horvu : 436.0) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] - Hordeum vulgare (Barley) & (at3g63470 : 424.0) serine carboxypeptidase-like 40 (scpl40); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 39 (TAIR:AT3G52020.1); Has 3527 Blast hits to 3467 proteins in 341 species: Archae - 0; Bacteria - 144; Metazoa - 641; Fungi - 871; Plants - 1469; Viruses - 0; Other Eukaryotes - 402 (source: NCBI BLink). & (reliability: 806.0) & (original description: Putative CXP, Description = Serine carboxypeptidase II-3, PFAM = PF00450)' T '17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben044scf00003411ctg012_2079-5953' '(at4g33430 : 117.0) Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1 and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome.; BRI1-associated receptor kinase (BAK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: somatic embryogenesis receptor-like kinase 4 (TAIR:AT2G13790.1). & (reliability: 234.0) & (original description: Putative lrr1, Description = BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, PFAM = PF08263)' T '17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf00821_1610345-1613765' '(at1g71830 : 183.0) Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production. later; somatic embryogenesis receptor-like kinase 1 (SERK1); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: plasma membrane, protein complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: somatic embryogenesis receptor-like kinase 2 (TAIR:AT1G34210.1); Has 181670 Blast hits to 121787 proteins in 4268 species: Archae - 123; Bacteria - 18224; Metazoa - 45784; Fungi - 8994; Plants - 88758; Viruses - 411; Other Eukaryotes - 19376 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative lrr1, Description = Putative somatic embryogenesis receptor kinase leucine-rich repeat protein 1, PFAM = PF08263;PF13855)' T '17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf01385_86571-92360' '(gnl|cdd|36496 : 482.0) no description available & (gnl|cdd|84781 : 458.0) no description available & (at3g63470 : 410.0) serine carboxypeptidase-like 40 (scpl40); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 39 (TAIR:AT3G52020.1); Has 3527 Blast hits to 3467 proteins in 341 species: Archae - 0; Bacteria - 144; Metazoa - 641; Fungi - 871; Plants - 1469; Viruses - 0; Other Eukaryotes - 402 (source: NCBI BLink). & (p52711|cbp23_horvu : 396.0) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] - Hordeum vulgare (Barley) & (reliability: 750.0) & (original description: Putative SCPL40, Description = Serine carboxypeptidase-like 40, PFAM = PF00450)' T '17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf01887_385189-403145' '(gnl|cdd|36496 : 466.0) no description available & (gnl|cdd|84781 : 444.0) no description available & (at3g63470 : 354.0) serine carboxypeptidase-like 40 (scpl40); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 39 (TAIR:AT3G52020.1); Has 3527 Blast hits to 3467 proteins in 341 species: Archae - 0; Bacteria - 144; Metazoa - 641; Fungi - 871; Plants - 1469; Viruses - 0; Other Eukaryotes - 402 (source: NCBI BLink). & (p52711|cbp23_horvu : 352.0) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] - Hordeum vulgare (Barley) & (reliability: 662.0) & (original description: Putative BRS1, Description = Carboxypeptidase, PFAM = PF00450)' T '17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf02174_17590-20341' '(at2g35150 : 375.0) EXORDIUM like 1 (EXL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: EXORDIUM like 5 (TAIR:AT2G17230.1); Has 396 Blast hits to 396 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 394; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68252 : 301.0) no description available & (reliability: 704.0) & (original description: Putative EXL7, Description = Protein EXORDIUM-like 7, PFAM = PF04674)' T '17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf02289_188228-201606' '(at1g69010 : 139.0) BES1-interacting Myc-like protein 2 (BIM2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: dTDP-rhamnose biosynthetic process, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G08130.3); Has 2743 Blast hits to 2732 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 63; Plants - 2453; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative TCM_011433, Description = BES1-interacting Myc-like protein 2, PFAM = PF00010)' T '17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf02513_1212351-1225639' '(at4g33430 : 922.0) Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1 and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome.; BRI1-associated receptor kinase (BAK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: somatic embryogenesis receptor-like kinase 4 (TAIR:AT2G13790.1). & (gnl|cdd|36401 : 355.0) no description available & (q8lpb4|pskr_dauca : 234.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 161.0) no description available & (reliability: 1844.0) & (original description: Putative SERK2, Description = Somatic embryogenesis receptor kinase 2, PFAM = PF08263;PF00069)' T '17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf03473_147198-157217' '(at2g46290 : 550.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TGF-beta receptor interacting protein 1 (TAIR:AT2G46280.2); Has 51915 Blast hits to 23729 proteins in 705 species: Archae - 52; Bacteria - 7544; Metazoa - 20576; Fungi - 11592; Plants - 5771; Viruses - 0; Other Eukaryotes - 6380 (source: NCBI BLink). & (gnl|cdd|35862 : 486.0) no description available & (gnl|cdd|29257 : 161.0) no description available & (reliability: 1062.0) & (original description: Putative eIF7, Description = Eukaryotic translation initiation factor 3 subunit I, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf03551_205212-212702' '(at5g08130 : 240.0) Arabidopsis thaliana basic helix-loop-helix (bHLH) family protein involved in brassinosteroid signaling. It synergistically interacts with BES1 to bind to E box sequences (CANNTG).; BIM1; FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: brassinosteroid mediated signaling pathway, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BES1-interacting Myc-like protein 2 (TAIR:AT1G69010.1). & (reliability: 480.0) & (original description: Putative BIM2, Description = Transcription factor BIM2, PFAM = PF00010)' T '17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf03822_112597-115640' '(at2g17230 : 449.0) EXORDIUM like 5 (EXL5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: EXORDIUM like 1 (TAIR:AT2G35150.1); Has 402 Blast hits to 401 proteins in 25 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 398; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68252 : 361.0) no description available & (reliability: 898.0) & (original description: Putative EXL5, Description = Protein EXORDIUM-like 5, PFAM = PF04674)' T '17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf03867_37887-40903' '(at2g35150 : 370.0) EXORDIUM like 1 (EXL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: EXORDIUM like 5 (TAIR:AT2G17230.1); Has 396 Blast hits to 396 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 394; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68252 : 304.0) no description available & (reliability: 718.0) & (original description: Putative EXL7, Description = Protein EXORDIUM-like 7, PFAM = PF04674)' T '17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf05325_106467-118358' '(at4g30610 : 699.0) Encodes a secreted glycosylated serine carboxypeptidase with broad substrate preference that is involved in brassinosteroid signalling via BRI1. It is proteolytically processed in vivo by a separate as yet unidentified protease.; BRI1 SUPPRESSOR 1 (BRS1); CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 22 (TAIR:AT2G24000.1); Has 3492 Blast hits to 3440 proteins in 297 species: Archae - 0; Bacteria - 59; Metazoa - 632; Fungi - 854; Plants - 1543; Viruses - 0; Other Eukaryotes - 404 (source: NCBI BLink). & (gnl|cdd|36496 : 547.0) no description available & (p08819|cbp2_wheat : 504.0) Serine carboxypeptidase 2 (EC 3.4.16.6) (Serine carboxypeptidase II) (Carboxypeptidase D) (CPDW-II) (CP-WII) [Contains: Serine carboxypeptidase 2 chain A (Serine carboxypeptidase II chain A); Serine carboxypeptidase 2 chain B (Serine ca & (gnl|cdd|84781 : 485.0) no description available & (reliability: 1398.0) & (original description: Putative SCPL24, Description = Serine carboxypeptidase 24, PFAM = PF00450)' T '17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf06388_487658-497091' '(at5g08130 : 273.0) Arabidopsis thaliana basic helix-loop-helix (bHLH) family protein involved in brassinosteroid signaling. It synergistically interacts with BES1 to bind to E box sequences (CANNTG).; BIM1; FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: brassinosteroid mediated signaling pathway, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BES1-interacting Myc-like protein 2 (TAIR:AT1G69010.1). & (reliability: 546.0) & (original description: Putative BIM1, Description = Transcription factor BIM1, PFAM = PF00010)' T '17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf10464_13911-22378' '(gnl|cdd|36496 : 467.0) no description available & (gnl|cdd|84781 : 450.0) no description available & (p52711|cbp23_horvu : 444.0) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] - Hordeum vulgare (Barley) & (at2g35780 : 429.0) serine carboxypeptidase-like 26 (scpl26); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 27 (TAIR:AT3G07990.1); Has 3733 Blast hits to 3660 proteins in 399 species: Archae - 0; Bacteria - 269; Metazoa - 644; Fungi - 857; Plants - 1549; Viruses - 0; Other Eukaryotes - 414 (source: NCBI BLink). & (reliability: 858.0) & (original description: Putative Sb01g033770, Description = Carboxypeptidase, PFAM = PF00450)' T '17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf11779_215448-227040' '(at4g33430 : 934.0) Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1 and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome.; BRI1-associated receptor kinase (BAK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: somatic embryogenesis receptor-like kinase 4 (TAIR:AT2G13790.1). & (gnl|cdd|36401 : 353.0) no description available & (q8lkz1|nork_pea : 236.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 170.0) no description available & (reliability: 1868.0) & (original description: Putative BAK1, Description = BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, PFAM = PF00069;PF08263)' T '17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'niben101scf11853_31925-41468' '(at5g08130 : 281.0) Arabidopsis thaliana basic helix-loop-helix (bHLH) family protein involved in brassinosteroid signaling. It synergistically interacts with BES1 to bind to E box sequences (CANNTG).; BIM1; FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: brassinosteroid mediated signaling pathway, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BES1-interacting Myc-like protein 2 (TAIR:AT1G69010.1). & (reliability: 562.0) & (original description: Putative BIM1, Description = Transcription factor BIM1, PFAM = PF00010)' T '17.3.3' 'hormone metabolism.brassinosteroid.induced-regulated-responsive-activated' 'niben101scf00254_734028-736522' '(at3g61460 : 215.0) Encodes a novel ring finger protein and forms an N-terminal hydrophobic domain and a C-terminal RING-H2 signature. Expression is down regulated by brassinolide.; brassinosteroid-responsive RING-H2 (BRH1); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to brassinosteroid stimulus, response to chitin; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G63840.1); Has 6755 Blast hits to 6739 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 1714; Fungi - 535; Plants - 3593; Viruses - 29; Other Eukaryotes - 884 (source: NCBI BLink). & (reliability: 430.0) & (original description: Putative RHF, Description = Ubiquitin-protein ligase E3, PFAM = PF13639)' T '17.3.3' 'hormone metabolism.brassinosteroid.induced-regulated-responsive-activated' 'niben101scf00761_801446-835448' '(at3g20780 : 1054.0) Encodes putative eukaryotic homolog of archaebacterial topoisomerase VI subunit B, TOP6B. Is essential for endoreduplication and is involved in cell expansion and cell proliferation.; topoisomerase 6 subunit B (TOP6B); CONTAINS InterPro DOMAIN/s: DNA topoisomerase VI, subunit B, transducer (InterPro:IPR015320), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), ATPase-like, ATP-binding domain (InterPro:IPR003594); Has 873 Blast hits to 542 proteins in 165 species: Archae - 495; Bacteria - 44; Metazoa - 2; Fungi - 2; Plants - 34; Viruses - 0; Other Eukaryotes - 296 (source: NCBI BLink). & (gnl|cdd|81315 : 347.0) no description available & (reliability: 2108.0) & (original description: Putative TOP6B, Description = DNA topoisomerase 6 subunit B, PFAM = PF02518;PF09239)' T '17.3.3' 'hormone metabolism.brassinosteroid.induced-regulated-responsive-activated' 'niben101scf00761_815363-818612' '(at3g20780 : 221.0) Encodes putative eukaryotic homolog of archaebacterial topoisomerase VI subunit B, TOP6B. Is essential for endoreduplication and is involved in cell expansion and cell proliferation.; topoisomerase 6 subunit B (TOP6B); CONTAINS InterPro DOMAIN/s: DNA topoisomerase VI, subunit B, transducer (InterPro:IPR015320), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), ATPase-like, ATP-binding domain (InterPro:IPR003594); Has 873 Blast hits to 542 proteins in 165 species: Archae - 495; Bacteria - 44; Metazoa - 2; Fungi - 2; Plants - 34; Viruses - 0; Other Eukaryotes - 296 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative BIN3, Description = DNA topoisomerase 6 subunit B, PFAM = PF02518)' T '17.3.3' 'hormone metabolism.brassinosteroid.induced-regulated-responsive-activated' 'niben101scf09701_299784-302275' '(at3g61460 : 80.5) Encodes a novel ring finger protein and forms an N-terminal hydrophobic domain and a C-terminal RING-H2 signature. Expression is down regulated by brassinolide.; brassinosteroid-responsive RING-H2 (BRH1); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to brassinosteroid stimulus, response to chitin; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G63840.1); Has 6755 Blast hits to 6739 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 1714; Fungi - 535; Plants - 3593; Viruses - 29; Other Eukaryotes - 884 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative PGSC0003DMG400012791, Description = RING-H2 zinc finger protein RHA2a, PFAM = PF13639)' T '17.3.3' 'hormone metabolism.brassinosteroid.induced-regulated-responsive-activated' 'niben101scf11782_116573-119071' '(at3g61460 : 180.0) Encodes a novel ring finger protein and forms an N-terminal hydrophobic domain and a C-terminal RING-H2 signature. Expression is down regulated by brassinolide.; brassinosteroid-responsive RING-H2 (BRH1); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to brassinosteroid stimulus, response to chitin; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G63840.1); Has 6755 Blast hits to 6739 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 1714; Fungi - 535; Plants - 3593; Viruses - 29; Other Eukaryotes - 884 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative BRH1, Description = BRH1 RING finger protein, PFAM = PF13639)' T '17.4' 'hormone metabolism.cytokinin' '' '' '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'nbv0.3scaffold5828_58018-62123' '(at2g41510 : 692.0) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase/dehydrogenase 1 (CKX1); FUNCTIONS IN: cytokinin dehydrogenase activity; INVOLVED IN: N-terminal protein myristoylation, cytokinin catabolic process, meristem development; LOCATED IN: vacuole; EXPRESSED IN: lateral root, shoot apex, hypocotyl, root, flower; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 6 (TAIR:AT3G63440.1); Has 6769 Blast hits to 6763 proteins in 1376 species: Archae - 168; Bacteria - 3882; Metazoa - 142; Fungi - 1302; Plants - 645; Viruses - 0; Other Eukaryotes - 630 (source: NCBI BLink). & (gnl|cdd|36445 : 548.0) no description available & (q9t0n8|ckx1_maize : 398.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 398.0) no description available & (reliability: 1384.0) & (original description: Putative CKX1, Description = Cytokinin dehydrogenase 1, PFAM = PF01565;PF09265)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'nbv0.3scaffold10523_35406-39192' '(at1g22360 : 323.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 205.0) no description available & (p56725|zox_phavu : 176.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 96.5) no description available & (reliability: 636.0) & (original description: Putative UGT4, Description = Glycosyltransferase, PFAM = PF00201)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'nbv0.3scaffold16830_1872-7938' '(at5g56970 : 598.0) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase 3 (CKX3); FUNCTIONS IN: primary amine oxidase activity, cytokinin dehydrogenase activity; INVOLVED IN: cytokinin catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase 4 (TAIR:AT4G29740.2); Has 7950 Blast hits to 7944 proteins in 1387 species: Archae - 176; Bacteria - 4485; Metazoa - 150; Fungi - 1601; Plants - 789; Viruses - 0; Other Eukaryotes - 749 (source: NCBI BLink). & (gnl|cdd|36445 : 546.0) no description available & (q9t0n8|ckx1_maize : 483.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 395.0) no description available & (reliability: 1196.0) & (original description: Putative CKX3, Description = Cytokinin dehydrogenase 3, PFAM = PF09265;PF01565)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'nbv0.3scaffold58200_10942-12443' '(at5g56970 : 82.4) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase 3 (CKX3); FUNCTIONS IN: primary amine oxidase activity, cytokinin dehydrogenase activity; INVOLVED IN: cytokinin catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase 4 (TAIR:AT4G29740.2); Has 7950 Blast hits to 7944 proteins in 1387 species: Archae - 176; Bacteria - 4485; Metazoa - 150; Fungi - 1601; Plants - 789; Viruses - 0; Other Eukaryotes - 749 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative CKX, Description = Cytokinin oxidase/dehydrogenase, PFAM = PF01565)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'nbv0.3scaffold97251_1-4225' '(at5g56970 : 281.0) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase 3 (CKX3); FUNCTIONS IN: primary amine oxidase activity, cytokinin dehydrogenase activity; INVOLVED IN: cytokinin catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase 4 (TAIR:AT4G29740.2); Has 7950 Blast hits to 7944 proteins in 1387 species: Archae - 176; Bacteria - 4485; Metazoa - 150; Fungi - 1601; Plants - 789; Viruses - 0; Other Eukaryotes - 749 (source: NCBI BLink). & (gnl|cdd|36445 : 246.0) no description available & (q9t0n8|ckx1_maize : 231.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 124.0) no description available & (reliability: 562.0) & (original description: Putative cko1, Description = Cytokinin dehydrogenase 3, PFAM = PF09265;PF01565)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'nbv0.3scaffold103014_420-3677' '(at2g36800 : 440.0) Encodes a DON-Glucosyltransferase. The UGT73C5 glucosylates both brassinolide and castasterone in the 23-O position. The enzyme is presumably involved in the homeostasis of those steroid hormones hence regulating BR activity. Transgenic plants overexpressing UGT73C5 show a typical BR-deficient phenotype.; don-glucosyltransferase 1 (DOGT1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73C6 (TAIR:AT2G36790.1); Has 7663 Blast hits to 7564 proteins in 401 species: Archae - 0; Bacteria - 196; Metazoa - 2172; Fungi - 32; Plants - 5134; Viruses - 64; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 215.0) no description available & (p56725|zox_phavu : 135.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 90.8) no description available & (reliability: 852.0) & (original description: Putative UGT73C3, Description = UDP-glycosyltransferase 73C3, PFAM = PF00201)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'nbv0.3scaffold131683_1-1590' '(gnl|cdd|72681 : 231.0) no description available & (at5g56970 : 227.0) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase 3 (CKX3); FUNCTIONS IN: primary amine oxidase activity, cytokinin dehydrogenase activity; INVOLVED IN: cytokinin catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase 4 (TAIR:AT4G29740.2); Has 7950 Blast hits to 7944 proteins in 1387 species: Archae - 176; Bacteria - 4485; Metazoa - 150; Fungi - 1601; Plants - 789; Viruses - 0; Other Eukaryotes - 749 (source: NCBI BLink). & (gnl|cdd|36445 : 200.0) no description available & (q9t0n8|ckx1_maize : 154.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (reliability: 454.0) & (original description: Putative cko1, Description = Cytokinin oxidase/dehydrogenase, PFAM = PF09265)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'nbv0.5scaffold343_505652-510697' '(at1g22360 : 352.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 217.0) no description available & (q41819|iaag_maize : 185.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 102.0) no description available & (reliability: 666.0) & (original description: Putative UGT709C2, Description = 7-deoxyloganetic acid glucosyltransferase, PFAM = PF00201)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'nbv0.5scaffold740_561201-569836' '(at2g15490 : 159.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (q8rxa5|czog2_maize : 132.0) Cis-zeatin O-glucosyltransferase 2 (EC 2.4.1.215) (cisZOG2) - Zea mays (Maize) & (gnl|cdd|36406 : 130.0) no description available & (gnl|cdd|79510 : 83.8) no description available & (reliability: 302.0) & (original description: Putative UGT95B1, Description = Glycosyltransferase, PFAM = PF00201)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'nbv0.5scaffold1360_118420-124480' '(at1g22380 : 319.0) Encodes a putative UDP-glucosyl transferase. At1g22380 was initially identified as encoding the protein AAF87154, which has been classified as a bHLH protein (AtbHLH152). Subsequently it has been found that the AAF87154 protein appears to be encoded by the AT1G23970 genomic locus.; UDP-glucosyl transferase 85A3 (UGT85A3); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G22400.1); Has 7656 Blast hits to 7558 proteins in 363 species: Archae - 0; Bacteria - 87; Metazoa - 2193; Fungi - 26; Plants - 5186; Viruses - 99; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 202.0) no description available & (q41819|iaag_maize : 177.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 101.0) no description available & (reliability: 632.0) & (original description: Putative GT4, Description = Glycosyltransferase, PFAM = PF00201)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'nbv0.5scaffold1793_312178-315398' '(at5g19040 : 191.0) Encodes cytokinin synthase.; isopentenyltransferase 5 (IPT5); CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 7 (TAIR:AT3G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36598 : 168.0) no description available & (reliability: 382.0) & (original description: Putative SjIPT4, Description = Isopentenyltransferase, PFAM = PF01715)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'nbv0.5scaffold2049_94676-103247' '(at5g56970 : 607.0) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase 3 (CKX3); FUNCTIONS IN: primary amine oxidase activity, cytokinin dehydrogenase activity; INVOLVED IN: cytokinin catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase 4 (TAIR:AT4G29740.2); Has 7950 Blast hits to 7944 proteins in 1387 species: Archae - 176; Bacteria - 4485; Metazoa - 150; Fungi - 1601; Plants - 789; Viruses - 0; Other Eukaryotes - 749 (source: NCBI BLink). & (gnl|cdd|36445 : 547.0) no description available & (q9t0n8|ckx1_maize : 467.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 391.0) no description available & (reliability: 1214.0) & (original description: Putative CKX3, Description = Cytokinin dehydrogenase 3, PFAM = PF09265;PF01565)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'nbv0.5scaffold4554_2321-9960' '(at5g21482 : 689.0) This gene used to be called AtCKX5. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase 7 (CKX7); CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 1 (TAIR:AT2G41510.1); Has 8328 Blast hits to 8321 proteins in 1506 species: Archae - 208; Bacteria - 5322; Metazoa - 141; Fungi - 1495; Plants - 573; Viruses - 0; Other Eukaryotes - 589 (source: NCBI BLink). & (gnl|cdd|36445 : 407.0) no description available & (q9t0n8|ckx1_maize : 367.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 354.0) no description available & (reliability: 1378.0) & (original description: Putative CKX7, Description = Cytokinin dehydrogenase 7, PFAM = PF09265;PF01565)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben044scf00003896ctg041_366-2607' '(at1g22380 : 233.0) Encodes a putative UDP-glucosyl transferase. At1g22380 was initially identified as encoding the protein AAF87154, which has been classified as a bHLH protein (AtbHLH152). Subsequently it has been found that the AAF87154 protein appears to be encoded by the AT1G23970 genomic locus.; UDP-glucosyl transferase 85A3 (UGT85A3); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G22400.1); Has 7656 Blast hits to 7558 proteins in 363 species: Archae - 0; Bacteria - 87; Metazoa - 2193; Fungi - 26; Plants - 5186; Viruses - 99; Other Eukaryotes - 65 (source: NCBI BLink). & (q43641|ufog_solme : 154.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|36406 : 151.0) no description available & (gnl|cdd|79510 : 94.6) no description available & (reliability: 462.0) & (original description: Putative GT4, Description = Glycosyltransferase, PFAM = PF00201)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben044scf00008217ctg045_1-3450' '(at5g19040 : 244.0) Encodes cytokinin synthase.; isopentenyltransferase 5 (IPT5); CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 7 (TAIR:AT3G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36598 : 237.0) no description available & (gnl|cdd|80505 : 133.0) no description available & (reliability: 488.0) & (original description: Putative IPT, Description = Adenylate isopentenyltransferase, PFAM = PF01715)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben044scf00009974ctg007_5242-10338' '(at2g41510 : 729.0) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase/dehydrogenase 1 (CKX1); FUNCTIONS IN: cytokinin dehydrogenase activity; INVOLVED IN: N-terminal protein myristoylation, cytokinin catabolic process, meristem development; LOCATED IN: vacuole; EXPRESSED IN: lateral root, shoot apex, hypocotyl, root, flower; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 6 (TAIR:AT3G63440.1); Has 6769 Blast hits to 6763 proteins in 1376 species: Archae - 168; Bacteria - 3882; Metazoa - 142; Fungi - 1302; Plants - 645; Viruses - 0; Other Eukaryotes - 630 (source: NCBI BLink). & (gnl|cdd|36445 : 555.0) no description available & (q9t0n8|ckx1_maize : 403.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 402.0) no description available & (reliability: 1458.0) & (original description: Putative CKX10, Description = Cytokinin dehydrogenase 10, PFAM = PF01565;PF09265)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben044scf00012572ctg000_1-7245' '(at5g21482 : 696.0) This gene used to be called AtCKX5. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase 7 (CKX7); CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 1 (TAIR:AT2G41510.1); Has 8328 Blast hits to 8321 proteins in 1506 species: Archae - 208; Bacteria - 5322; Metazoa - 141; Fungi - 1495; Plants - 573; Viruses - 0; Other Eukaryotes - 589 (source: NCBI BLink). & (gnl|cdd|36445 : 408.0) no description available & (q9t0n8|ckx1_maize : 363.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 356.0) no description available & (reliability: 1392.0) & (original description: Putative CKX7, Description = Cytokinin dehydrogenase 7, PFAM = PF09265;PF01565)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben044scf00014320ctg006_356-2591' '(at5g19040 : 156.0) Encodes cytokinin synthase.; isopentenyltransferase 5 (IPT5); CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 7 (TAIR:AT3G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36598 : 145.0) no description available & (reliability: 312.0) & (original description: Putative RaIPT7, Description = Adenylate isopentenyltransferase, PFAM = PF01715)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben044scf00028825ctg003_1-2248' '(at5g56970 : 297.0) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase 3 (CKX3); FUNCTIONS IN: primary amine oxidase activity, cytokinin dehydrogenase activity; INVOLVED IN: cytokinin catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase 4 (TAIR:AT4G29740.2); Has 7950 Blast hits to 7944 proteins in 1387 species: Archae - 176; Bacteria - 4485; Metazoa - 150; Fungi - 1601; Plants - 789; Viruses - 0; Other Eukaryotes - 749 (source: NCBI BLink). & (gnl|cdd|72681 : 248.0) no description available & (gnl|cdd|36445 : 241.0) no description available & (q9t0n8|ckx1_maize : 194.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (reliability: 594.0) & (original description: Putative CKX, Description = Cytokinin oxidase/dehydrogenase, PFAM = PF09265)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben044scf00032642ctg008_1-4160' '(at2g41510 : 645.0) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase/dehydrogenase 1 (CKX1); FUNCTIONS IN: cytokinin dehydrogenase activity; INVOLVED IN: N-terminal protein myristoylation, cytokinin catabolic process, meristem development; LOCATED IN: vacuole; EXPRESSED IN: lateral root, shoot apex, hypocotyl, root, flower; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 6 (TAIR:AT3G63440.1); Has 6769 Blast hits to 6763 proteins in 1376 species: Archae - 168; Bacteria - 3882; Metazoa - 142; Fungi - 1302; Plants - 645; Viruses - 0; Other Eukaryotes - 630 (source: NCBI BLink). & (gnl|cdd|36445 : 512.0) no description available & (gnl|cdd|72681 : 398.0) no description available & (q9t0n8|ckx1_maize : 378.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (reliability: 1290.0) & (original description: Putative cko1, Description = Cytokinin oxidase/dehydrogenase, PFAM = PF09265;PF01565)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben044scf00032671ctg003_1-2590' '(at1g22360 : 211.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q93xp7|czog1_maize : 146.0) Cis-zeatin O-glucosyltransferase 1 (EC 2.4.1.215) (cisZOG1) - Zea mays (Maize) & (gnl|cdd|36406 : 143.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 416.0) & (original description: Putative BX8, Description = Glycosyltransferase, PFAM = PF00201)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf00361_189097-196804' '(at5g21482 : 691.0) This gene used to be called AtCKX5. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase 7 (CKX7); CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 1 (TAIR:AT2G41510.1); Has 8328 Blast hits to 8321 proteins in 1506 species: Archae - 208; Bacteria - 5322; Metazoa - 141; Fungi - 1495; Plants - 573; Viruses - 0; Other Eukaryotes - 589 (source: NCBI BLink). & (gnl|cdd|36445 : 406.0) no description available & (q9t0n8|ckx1_maize : 363.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 355.0) no description available & (reliability: 1382.0) & (original description: Putative CKX7, Description = Cytokinin dehydrogenase 7, PFAM = PF09265;PF01565)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf00560_516677-523047' '(p56725|zox_phavu : 398.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36780 : 160.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 157.0) no description available & (gnl|cdd|79510 : 81.9) no description available & (reliability: 300.0) & (original description: Putative PGSC0003DMG400032511, Description = Glycosyltransferase, PFAM = PF00201)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf00669_13794-17254' '(at2g36750 : 585.0) UDP-glucosyl transferase 73C1 (UGT73C1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: don-glucosyltransferase 1 (TAIR:AT2G36800.1); Has 7705 Blast hits to 7611 proteins in 415 species: Archae - 0; Bacteria - 205; Metazoa - 2197; Fungi - 31; Plants - 5129; Viruses - 79; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|36406 : 251.0) no description available & (p56725|zox_phavu : 192.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 83.8) no description available & (reliability: 1170.0) & (original description: Putative UGT73C1, Description = UDP-glycosyltransferase 73C1, PFAM = PF00201)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf01386_22394-25809' '(p56725|zox_phavu : 434.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36780 : 186.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 155.0) no description available & (gnl|cdd|79510 : 88.5) no description available & (reliability: 338.0) & (original description: Putative CISZOG1, Description = Cis-zeatin O-glucosyltransferase 1, PFAM = PF00201)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf01518_621075-624211' '(gnl|cdd|36598 : 294.0) no description available & (at1g68460 : 291.0) Encodes a putative adenylate isopentenyltransferase. It catalyzes the formation of isopentenyladenosine 5'-monophosphate (iPMP) from AMP and dimethylallylpyrophosphate (DMAPP), but it has a lower Km for ADP and likely works using ADP or ATP in plants. It is involved in cytokinin biosynthesis.; isopentenyltransferase 1 (IPT1); FUNCTIONS IN: AMP dimethylallyltransferase activity, ATP/ADP dimethylallyltransferase activity; INVOLVED IN: cytokinin biosynthetic process, secondary growth; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: ATP/ADP isopentenyltransferases (TAIR:AT3G19160.1); Has 7944 Blast hits to 7761 proteins in 2606 species: Archae - 0; Bacteria - 5388; Metazoa - 167; Fungi - 152; Plants - 293; Viruses - 0; Other Eukaryotes - 1944 (source: NCBI BLink). & (gnl|cdd|30672 : 147.0) no description available & (reliability: 582.0) & (original description: Putative AIPT, Description = Adenylate isopentenyltransferase, PFAM = PF01715;PF01715)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf01612_309324-313541' '(at3g63440 : 737.0) This gene used to be called AtCKX7. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase/dehydrogenase 6 (CKX6); CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 1 (TAIR:AT2G41510.1); Has 6490 Blast hits to 6485 proteins in 1279 species: Archae - 163; Bacteria - 4080; Metazoa - 140; Fungi - 1069; Plants - 530; Viruses - 0; Other Eukaryotes - 508 (source: NCBI BLink). & (gnl|cdd|36445 : 575.0) no description available & (q9t0n8|ckx1_maize : 407.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 401.0) no description available & (reliability: 1474.0) & (original description: Putative CKX6, Description = Cytokinin dehydrogenase 6, PFAM = PF09265;PF01565)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf01634_323894-328198' '(at2g41510 : 735.0) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase/dehydrogenase 1 (CKX1); FUNCTIONS IN: cytokinin dehydrogenase activity; INVOLVED IN: N-terminal protein myristoylation, cytokinin catabolic process, meristem development; LOCATED IN: vacuole; EXPRESSED IN: lateral root, shoot apex, hypocotyl, root, flower; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 6 (TAIR:AT3G63440.1); Has 6769 Blast hits to 6763 proteins in 1376 species: Archae - 168; Bacteria - 3882; Metazoa - 142; Fungi - 1302; Plants - 645; Viruses - 0; Other Eukaryotes - 630 (source: NCBI BLink). & (gnl|cdd|36445 : 562.0) no description available & (q9t0n8|ckx1_maize : 407.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 404.0) no description available & (reliability: 1470.0) & (original description: Putative CKX1, Description = Cytokinin dehydrogenase 1, PFAM = PF01565;PF09265)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf01951_82991-87074' '(at3g11340 : 395.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 76C1 (TAIR:AT5G05870.1); Has 7583 Blast hits to 7530 proteins in 440 species: Archae - 0; Bacteria - 352; Metazoa - 2017; Fungi - 25; Plants - 5047; Viruses - 86; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|36406 : 202.0) no description available & (q43641|ufog_solme : 171.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|79510 : 110.0) no description available & (reliability: 714.0) & (original description: Putative UGT76A2, Description = UDP-glucose iridoid glucosyltransferase, PFAM = PF00201)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf01980_1023582-1027599' '(at1g22400 : 654.0) UGT85A1; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 7940 Blast hits to 7832 proteins in 421 species: Archae - 0; Bacteria - 227; Metazoa - 2330; Fungi - 36; Plants - 5216; Viruses - 60; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|36406 : 257.0) no description available & (q41819|iaag_maize : 186.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 118.0) no description available & (reliability: 1308.0) & (original description: Putative UGT85A24, Description = 7-deoxyloganetin glucosyltransferase, PFAM = PF00201)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf02502_884002-887483' '(at2g36800 : 452.0) Encodes a DON-Glucosyltransferase. The UGT73C5 glucosylates both brassinolide and castasterone in the 23-O position. The enzyme is presumably involved in the homeostasis of those steroid hormones hence regulating BR activity. Transgenic plants overexpressing UGT73C5 show a typical BR-deficient phenotype.; don-glucosyltransferase 1 (DOGT1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73C6 (TAIR:AT2G36790.1); Has 7663 Blast hits to 7564 proteins in 401 species: Archae - 0; Bacteria - 196; Metazoa - 2172; Fungi - 32; Plants - 5134; Viruses - 64; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 219.0) no description available & (p56725|zox_phavu : 143.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 93.5) no description available & (reliability: 878.0) & (original description: Putative UGT19, Description = Glycosyltransferase, PFAM = PF00201)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf02537_879684-883233' '(at1g22360 : 658.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 242.0) no description available & (p14726|ufog_horvu : 188.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Bronze-1) - Hordeum vulgare (Barley) & (gnl|cdd|79510 : 128.0) no description available & (reliability: 1298.0) & (original description: Putative UGT85A23, Description = 7-deoxyloganetin glucosyltransferase, PFAM = PF00201)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf02537_899848-902369' '(at1g22370 : 244.0) UDP-glucosyl transferase 85A5 (UGT85A5); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A2 (TAIR:AT1G22360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 102.0) no description available & (reliability: 484.0) & (original description: Putative F3GT, Description = Glycosyltransferase, PFAM = )' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf02653_646676-650154' '(at1g22370 : 211.0) UDP-glucosyl transferase 85A5 (UGT85A5); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A2 (TAIR:AT1G22360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 117.0) no description available & (p56725|zox_phavu : 86.7) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 422.0) & (original description: Putative UGT4, Description = Glycosyltransferase, PFAM = )' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf02751_261362-266172' '(at1g22360 : 649.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 247.0) no description available & (p14726|ufog_horvu : 181.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Bronze-1) - Hordeum vulgare (Barley) & (gnl|cdd|79510 : 112.0) no description available & (reliability: 1294.0) & (original description: Putative UGT85A24, Description = 7-deoxyloganetin glucosyltransferase, PFAM = PF00201)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf03046_382182-385779' '(at2g36770 : 481.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7907 Blast hits to 7812 proteins in 435 species: Archae - 0; Bacteria - 273; Metazoa - 2293; Fungi - 33; Plants - 5130; Viruses - 108; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 225.0) no description available & (p56725|zox_phavu : 185.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 82.7) no description available & (reliability: 958.0) & (original description: Putative UGT73D1, Description = UDP-glycosyltransferase 73D1, PFAM = PF00201)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf03050_614543-623290' '(at1g75450 : 790.0) This gene used to be called AtCKX6. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase 5 (CKX5); CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 1 (TAIR:AT2G41510.1). & (gnl|cdd|36445 : 592.0) no description available & (q9t0n8|ckx1_maize : 448.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 434.0) no description available & (reliability: 1580.0) & (original description: Putative CKX5, Description = Cytokinin dehydrogenase 5, PFAM = PF09265;PF01565)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf03223_17098-20573' '(at2g15490 : 363.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 205.0) no description available & (p56725|zox_phavu : 161.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 90.0) no description available & (reliability: 700.0) & (original description: Putative GmSGT2, Description = Soyasapogenol B glucuronide galactosyltransferase, PFAM = PF00201)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf03536_130108-134527' '(at1g22360 : 177.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 131.0) no description available & (p56725|zox_phavu : 122.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 81.5) no description available & (reliability: 348.0) & (original description: Putative UGT4, Description = Glycosyltransferase, PFAM = PF00201)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf03536_130195-134016' '(at1g22360 : 96.3) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative UGT4, Description = Glycosyltransferase, PFAM = )' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf03651_367224-372220' '(at2g41510 : 727.0) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase/dehydrogenase 1 (CKX1); FUNCTIONS IN: cytokinin dehydrogenase activity; INVOLVED IN: N-terminal protein myristoylation, cytokinin catabolic process, meristem development; LOCATED IN: vacuole; EXPRESSED IN: lateral root, shoot apex, hypocotyl, root, flower; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 6 (TAIR:AT3G63440.1); Has 6769 Blast hits to 6763 proteins in 1376 species: Archae - 168; Bacteria - 3882; Metazoa - 142; Fungi - 1302; Plants - 645; Viruses - 0; Other Eukaryotes - 630 (source: NCBI BLink). & (gnl|cdd|36445 : 560.0) no description available & (gnl|cdd|72681 : 403.0) no description available & (q9t0n8|ckx1_maize : 402.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (reliability: 1454.0) & (original description: Putative CKX1, Description = Cytokinin dehydrogenase 1, PFAM = PF01565;PF09265)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf03714_293331-303353' '(at2g27760 : 474.0) Encodes tRNA isopentenyltransferase, similar to yeast MOD5.; tRNAisopentenyltransferase 2 (IPT2); CONTAINS InterPro DOMAIN/s: tRNA delta(2)-isopentenylpyrophosphate transferase (InterPro:IPR018022), tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 5 (TAIR:AT5G19040.1); Has 8447 Blast hits to 8274 proteins in 2665 species: Archae - 0; Bacteria - 5426; Metazoa - 146; Fungi - 137; Plants - 431; Viruses - 0; Other Eukaryotes - 2307 (source: NCBI BLink). & (gnl|cdd|36598 : 294.0) no description available & (gnl|cdd|80505 : 208.0) no description available & (reliability: 948.0) & (original description: Putative IPT2, Description = tRNA dimethylallyltransferase 2, PFAM = PF01715)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf04283_246651-249616' '(at3g63110 : 333.0) Encodes cytokinin synthase involved in cytokinin biosynthesis. IPT3 subcellular localization is modulated by farnesylation- when farnesylated it is localized to the nucleus, otherwise to the chloroplast.; isopentenyltransferase 3 (IPT3); CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 5 (TAIR:AT5G19040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36598 : 322.0) no description available & (gnl|cdd|30672 : 135.0) no description available & (reliability: 666.0) & (original description: Putative IPT3, Description = Adenylate isopentenyltransferase 3, chloroplastic, PFAM = PF01715;PF01715)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf04404_335285-339125' '(p56725|zox_phavu : 445.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g15490 : 180.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 136.0) no description available & (gnl|cdd|79510 : 85.0) no description available & (reliability: 336.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf04594_71511-74872' '(gnl|cdd|36598 : 299.0) no description available & (at1g68460 : 296.0) Encodes a putative adenylate isopentenyltransferase. It catalyzes the formation of isopentenyladenosine 5'-monophosphate (iPMP) from AMP and dimethylallylpyrophosphate (DMAPP), but it has a lower Km for ADP and likely works using ADP or ATP in plants. It is involved in cytokinin biosynthesis.; isopentenyltransferase 1 (IPT1); FUNCTIONS IN: AMP dimethylallyltransferase activity, ATP/ADP dimethylallyltransferase activity; INVOLVED IN: cytokinin biosynthetic process, secondary growth; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: ATP/ADP isopentenyltransferases (TAIR:AT3G19160.1); Has 7944 Blast hits to 7761 proteins in 2606 species: Archae - 0; Bacteria - 5388; Metazoa - 167; Fungi - 152; Plants - 293; Viruses - 0; Other Eukaryotes - 1944 (source: NCBI BLink). & (gnl|cdd|30672 : 155.0) no description available & (reliability: 592.0) & (original description: Putative AIPT, Description = Adenylate isopentenyltransferase, PFAM = PF01715;PF01715)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf04875_238020-242096' '(at2g36780 : 572.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 238.0) no description available & (p56725|zox_phavu : 165.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 80.8) no description available & (reliability: 1114.0) & (original description: Putative UGT73C3, Description = UDP-glycosyltransferase 73C3, PFAM = PF00201)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf05290_60395-64518' '(at3g63110 : 319.0) Encodes cytokinin synthase involved in cytokinin biosynthesis. IPT3 subcellular localization is modulated by farnesylation- when farnesylated it is localized to the nucleus, otherwise to the chloroplast.; isopentenyltransferase 3 (IPT3); CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 5 (TAIR:AT5G19040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36598 : 314.0) no description available & (gnl|cdd|80505 : 137.0) no description available & (reliability: 638.0) & (original description: Putative IPT3, Description = Adenylate isopentenyltransferase, PFAM = PF01715;PF01715)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf05449_3046-9301' '(at5g56970 : 553.0) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase 3 (CKX3); FUNCTIONS IN: primary amine oxidase activity, cytokinin dehydrogenase activity; INVOLVED IN: cytokinin catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase 4 (TAIR:AT4G29740.2); Has 7950 Blast hits to 7944 proteins in 1387 species: Archae - 176; Bacteria - 4485; Metazoa - 150; Fungi - 1601; Plants - 789; Viruses - 0; Other Eukaryotes - 749 (source: NCBI BLink). & (gnl|cdd|36445 : 517.0) no description available & (q9t0n8|ckx1_maize : 449.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 356.0) no description available & (reliability: 1106.0) & (original description: Putative CKX3, Description = Cytokinin dehydrogenase 3, PFAM = PF01565;PF09265;PF09265)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf06809_159204-163275' '(at2g36760 : 513.0) UDP-glucosyl transferase 73C2 (UGT73C2); FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: flower, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7948 Blast hits to 7837 proteins in 437 species: Archae - 0; Bacteria - 325; Metazoa - 2303; Fungi - 35; Plants - 5121; Viruses - 97; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36406 : 258.0) no description available & (p56725|zox_phavu : 150.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 81.5) no description available & (reliability: 1008.0) & (original description: Putative UGT73C2, Description = UDP-glycosyltransferase 73C2, PFAM = PF00201)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf07252_11938-27259' '(at2g41510 : 708.0) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase/dehydrogenase 1 (CKX1); FUNCTIONS IN: cytokinin dehydrogenase activity; INVOLVED IN: N-terminal protein myristoylation, cytokinin catabolic process, meristem development; LOCATED IN: vacuole; EXPRESSED IN: lateral root, shoot apex, hypocotyl, root, flower; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 6 (TAIR:AT3G63440.1); Has 6769 Blast hits to 6763 proteins in 1376 species: Archae - 168; Bacteria - 3882; Metazoa - 142; Fungi - 1302; Plants - 645; Viruses - 0; Other Eukaryotes - 630 (source: NCBI BLink). & (gnl|cdd|36445 : 549.0) no description available & (q9t0n8|ckx1_maize : 410.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 408.0) no description available & (reliability: 1416.0) & (original description: Putative CKX1, Description = Cytokinin dehydrogenase 1, PFAM = PF09265;PF01565)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf07585_17143-23538' '(at1g22340 : 528.0) UDP-glucosyl transferase 85A7 (UGT85A7); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A2 (TAIR:AT1G22360.1); Has 7763 Blast hits to 7662 proteins in 424 species: Archae - 0; Bacteria - 289; Metazoa - 2112; Fungi - 32; Plants - 5212; Viruses - 58; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|36406 : 227.0) no description available & (q41819|iaag_maize : 167.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 112.0) no description available & (reliability: 1052.0) & (original description: Putative UGT85A24, Description = 7-deoxyloganetin glucosyltransferase, PFAM = PF00201)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf08467_380719-385952' '(at1g22360 : 308.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 207.0) no description available & (p16165|ufo2_maize : 159.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Bronze-1) (Bz-Mc2 allele) - Zea mays (Maize) & (gnl|cdd|79510 : 106.0) no description available & (reliability: 612.0) & (original description: Putative UGT709C2, Description = 7-deoxyloganetic acid glucosyltransferase, PFAM = PF00201)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf08549_187200-200266' '(at1g22400 : 276.0) UGT85A1; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 7940 Blast hits to 7832 proteins in 421 species: Archae - 0; Bacteria - 227; Metazoa - 2330; Fungi - 36; Plants - 5216; Viruses - 60; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|36406 : 187.0) no description available & (p56725|zox_phavu : 154.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 83.1) no description available & (reliability: 552.0) & (original description: Putative PNGT2, Description = Uncharacterized glucosyltransferase 2, PFAM = PF00201)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf08835_95983-102728' '(at1g22370 : 187.0) UDP-glucosyl transferase 85A5 (UGT85A5); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A2 (TAIR:AT1G22360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 113.0) no description available & (q41819|iaag_maize : 84.3) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (reliability: 360.0) & (original description: Putative UGT4, Description = Glycosyltransferase, PFAM = )' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf10575_247329-253799' '(at5g19040 : 308.0) Encodes cytokinin synthase.; isopentenyltransferase 5 (IPT5); CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 7 (TAIR:AT3G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36598 : 302.0) no description available & (gnl|cdd|80505 : 136.0) no description available & (reliability: 616.0) & (original description: Putative IPT5, Description = Adenylate isopentenyltransferase 5, chloroplastic, PFAM = PF01715;PF01715)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf10877_28973-35628' '(at5g56970 : 578.0) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase 3 (CKX3); FUNCTIONS IN: primary amine oxidase activity, cytokinin dehydrogenase activity; INVOLVED IN: cytokinin catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase 4 (TAIR:AT4G29740.2); Has 7950 Blast hits to 7944 proteins in 1387 species: Archae - 176; Bacteria - 4485; Metazoa - 150; Fungi - 1601; Plants - 789; Viruses - 0; Other Eukaryotes - 749 (source: NCBI BLink). & (gnl|cdd|36445 : 526.0) no description available & (q9t0n8|ckx1_maize : 462.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (gnl|cdd|72681 : 394.0) no description available & (reliability: 1156.0) & (original description: Putative CKX3, Description = Cytokinin dehydrogenase 3, PFAM = PF01565;PF09265)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf11008_286968-290814' '(p56725|zox_phavu : 483.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34131 : 177.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 137.0) no description available & (gnl|cdd|79510 : 89.6) no description available & (reliability: 324.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf11182_171772-175596' '(gnl|cdd|36598 : 299.0) no description available & (at1g68460 : 276.0) Encodes a putative adenylate isopentenyltransferase. It catalyzes the formation of isopentenyladenosine 5'-monophosphate (iPMP) from AMP and dimethylallylpyrophosphate (DMAPP), but it has a lower Km for ADP and likely works using ADP or ATP in plants. It is involved in cytokinin biosynthesis.; isopentenyltransferase 1 (IPT1); FUNCTIONS IN: AMP dimethylallyltransferase activity, ATP/ADP dimethylallyltransferase activity; INVOLVED IN: cytokinin biosynthetic process, secondary growth; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: ATP/ADP isopentenyltransferases (TAIR:AT3G19160.1); Has 7944 Blast hits to 7761 proteins in 2606 species: Archae - 0; Bacteria - 5388; Metazoa - 167; Fungi - 152; Plants - 293; Viruses - 0; Other Eukaryotes - 1944 (source: NCBI BLink). & (gnl|cdd|30672 : 116.0) no description available & (reliability: 552.0) & (original description: Putative AIPT, Description = Adenylate isopentenyltransferase, PFAM = PF01715;PF01715)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf11299_120646-128098' '(at5g19040 : 135.0) Encodes cytokinin synthase.; isopentenyltransferase 5 (IPT5); CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 7 (TAIR:AT3G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36598 : 113.0) no description available & (reliability: 270.0) & (original description: Putative IPT, Description = Adenylate isopentenyltransferase, PFAM = PF01715)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf21960_196639-199640' '(at5g19040 : 325.0) Encodes cytokinin synthase.; isopentenyltransferase 5 (IPT5); CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 7 (TAIR:AT3G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36598 : 304.0) no description available & (gnl|cdd|80505 : 138.0) no description available & (reliability: 650.0) & (original description: Putative IPT5, Description = Adenylate isopentenyltransferase 5, chloroplastic, PFAM = PF01715;PF01715)' T '17.4.1' 'hormone metabolism.cytokinin.synthesis-degradation' 'niben101scf27793_53919-59921' '(at1g22380 : 352.0) Encodes a putative UDP-glucosyl transferase. At1g22380 was initially identified as encoding the protein AAF87154, which has been classified as a bHLH protein (AtbHLH152). Subsequently it has been found that the AAF87154 protein appears to be encoded by the AT1G23970 genomic locus.; UDP-glucosyl transferase 85A3 (UGT85A3); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G22400.1); Has 7656 Blast hits to 7558 proteins in 363 species: Archae - 0; Bacteria - 87; Metazoa - 2193; Fungi - 26; Plants - 5186; Viruses - 99; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 213.0) no description available & (q41819|iaag_maize : 186.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 102.0) no description available & (reliability: 672.0) & (original description: Putative UGT709C2, Description = 7-deoxyloganetic acid glucosyltransferase, PFAM = PF00201)' T '17.4.1.1001' 'hormone metabolism.cytokinin.synthesis-degradation' '6-benzylaminopurine' 'hormone metabolism.cytokinin' M '17.4.1.1002' 'hormone metabolism.cytokinin.synthesis-degradation' '6-benzylaminopurine-9-(beta-glucoside)' 'hormone metabolism.cytokinin' M '17.4.1.1003' 'hormone metabolism.cytokinin.synthesis-degradation' 'zeatin' 'hormone metabolism.cytokinin' M '17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'nbv0.3scaffold17602_2883-10046' '(at2g47430 : 434.0) Encodes a putative plasma membrane-bound hybrid histidine kinase and cytokinin sensor that is expressed within the female gametophyte.; CYTOKININ-INDEPENDENT 1 (CKI1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 1 (TAIR:AT2G17820.1); Has 89821 Blast hits to 76986 proteins in 2917 species: Archae - 765; Bacteria - 78909; Metazoa - 25; Fungi - 2111; Plants - 1771; Viruses - 21; Other Eukaryotes - 6219 (source: NCBI BLink). & (gnl|cdd|35739 : 125.0) no description available & (gnl|cdd|83720 : 119.0) no description available & (reliability: 868.0) & (original description: Putative PGSC0003DMG400037133, Description = Histidine kinase 1 plant, putative, PFAM = PF00072;PF02518;PF00512)' T '17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'nbv0.3scaffold95331_2422-4647' '(at5g35750 : 283.0) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35739 : 170.0) no description available & (gnl|cdd|83720 : 98.8) no description available & (reliability: 566.0) & (original description: Putative barA, Description = Histidine kinase 3, PFAM = PF00072)' T '17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'nbv0.5scaffold209_138606-147807' '(at5g35750 : 890.0) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35739 : 412.0) no description available & (gnl|cdd|67535 : 231.0) no description available & (o49230|etr1_braol : 114.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 1780.0) & (original description: Putative hk1, Description = Cytokinin receptor 1, PFAM = PF02518;PF03924;PF00512;PF00072)' T '17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'nbv0.5scaffold2297_321029-324619' '(at2g01830 : 405.0) Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane; WOODEN LEG (WOL); FUNCTIONS IN: osmosensor activity, cytokine binding, cytokinin receptor activity, protein histidine kinase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35739 : 159.0) no description available & (gnl|cdd|83720 : 157.0) no description available & (o49230|etr1_braol : 95.1) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 810.0) & (original description: Putative HK2, Description = Histidine kinase 2, PFAM = PF00512)' T '17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'nbv0.5scaffold2736_29822-37324' '(at2g47430 : 446.0) Encodes a putative plasma membrane-bound hybrid histidine kinase and cytokinin sensor that is expressed within the female gametophyte.; CYTOKININ-INDEPENDENT 1 (CKI1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 1 (TAIR:AT2G17820.1); Has 89821 Blast hits to 76986 proteins in 2917 species: Archae - 765; Bacteria - 78909; Metazoa - 25; Fungi - 2111; Plants - 1771; Viruses - 21; Other Eukaryotes - 6219 (source: NCBI BLink). & (gnl|cdd|35739 : 132.0) no description available & (gnl|cdd|83720 : 126.0) no description available & (reliability: 892.0) & (original description: Putative RCOM_0353300, Description = Histidine kinase 1 plant, putative, PFAM = PF00512;PF00072;PF02518)' T '17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben044scf00006982ctg003_1-7729' '(at2g01830 : 1036.0) Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane; WOODEN LEG (WOL); FUNCTIONS IN: osmosensor activity, cytokine binding, cytokinin receptor activity, protein histidine kinase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35739 : 338.0) no description available & (gnl|cdd|67535 : 230.0) no description available & (o49230|etr1_braol : 120.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 2072.0) & (original description: Putative hk1, Description = Cytokinin receptor 1, PFAM = PF02518;PF00512;PF00072;PF03924)' T '17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben044scf00011469ctg005_550-8949' '(at1g27320 : 1251.0) Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2.; histidine kinase 3 (HK3); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 124308 Blast hits to 110912 proteins in 3043 species: Archae - 772; Bacteria - 110408; Metazoa - 31; Fungi - 2185; Plants - 2022; Viruses - 28; Other Eukaryotes - 8862 (source: NCBI BLink). & (gnl|cdd|35739 : 518.0) no description available & (gnl|cdd|83720 : 330.0) no description available & (o49230|etr1_braol : 145.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 2502.0) & (original description: Putative hkf1, Description = Histidine kinase receptor, PFAM = PF00072;PF03924;PF02518;PF00512)' T '17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben044scf00027467ctg003_771-9254' '(at1g27320 : 1314.0) Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2.; histidine kinase 3 (HK3); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 124308 Blast hits to 110912 proteins in 3043 species: Archae - 772; Bacteria - 110408; Metazoa - 31; Fungi - 2185; Plants - 2022; Viruses - 28; Other Eukaryotes - 8862 (source: NCBI BLink). & (gnl|cdd|35739 : 514.0) no description available & (gnl|cdd|83720 : 329.0) no description available & (o49230|etr1_braol : 141.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 2628.0) & (original description: Putative hk3, Description = Histidine kinase 3 variant 2, PFAM = PF00072;PF00512;PF02518;PF03924)' T '17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben044scf00060927ctg001_165-5035' '(at2g25180 : 161.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 12 (RR12); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 10 (TAIR:AT4G31920.1); Has 111867 Blast hits to 110627 proteins in 3082 species: Archae - 684; Bacteria - 99498; Metazoa - 49; Fungi - 566; Plants - 2899; Viruses - 3; Other Eukaryotes - 8168 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative BnaC03g39750D, Description = BnaC03g39750D protein, PFAM = PF00072)' T '17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben101scf00087_944457-955596' '(at5g10720 : 972.0) member of Histidine Kinase; histidine kinase 5 (HK5); FUNCTIONS IN: protein histidine kinase activity; INVOLVED IN: cytokinin mediated signaling pathway; LOCATED IN: vacuole; EXPRESSED IN: male gametophyte, root; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (TAIR:AT5G10680.1); Has 142896 Blast hits to 126384 proteins in 3154 species: Archae - 1152; Bacteria - 126386; Metazoa - 257; Fungi - 2334; Plants - 2049; Viruses - 33; Other Eukaryotes - 10685 (source: NCBI BLink). & (gnl|cdd|35739 : 328.0) no description available & (gnl|cdd|83720 : 131.0) no description available & (q9m7m1|etr1_prupe : 113.0) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 1944.0) & (original description: Putative AHK5, Description = Histidine kinase 5, PFAM = PF02518;PF00512;PF00072;PF00072)' T '17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben101scf00290_76720-84954' '(at2g47430 : 448.0) Encodes a putative plasma membrane-bound hybrid histidine kinase and cytokinin sensor that is expressed within the female gametophyte.; CYTOKININ-INDEPENDENT 1 (CKI1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 1 (TAIR:AT2G17820.1); Has 89821 Blast hits to 76986 proteins in 2917 species: Archae - 765; Bacteria - 78909; Metazoa - 25; Fungi - 2111; Plants - 1771; Viruses - 21; Other Eukaryotes - 6219 (source: NCBI BLink). & (gnl|cdd|35739 : 132.0) no description available & (gnl|cdd|83720 : 127.0) no description available & (reliability: 896.0) & (original description: Putative RCOM_0353300, Description = Histidine kinase 1 plant, putative, PFAM = PF02518;PF00072;PF00512)' T '17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben101scf00691_149526-155693' '(at2g25180 : 362.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 12 (RR12); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 10 (TAIR:AT4G31920.1); Has 111867 Blast hits to 110627 proteins in 3082 species: Archae - 684; Bacteria - 99498; Metazoa - 49; Fungi - 566; Plants - 2899; Viruses - 3; Other Eukaryotes - 8168 (source: NCBI BLink). & (gnl|cdd|47754 : 106.0) no description available & (q689g6|prr95_orysa : 90.9) Two-component response regulator-like PRR95 (Pseudo-response regulator 95) (OsPRR95) - Oryza sativa (Rice) & (reliability: 724.0) & (original description: Putative rr19, Description = Putative B-type response regulator 19, PFAM = PF00249;PF00072)' T '17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben101scf01511_61580-68331' '(at2g25180 : 353.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 12 (RR12); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 10 (TAIR:AT4G31920.1); Has 111867 Blast hits to 110627 proteins in 3082 species: Archae - 684; Bacteria - 99498; Metazoa - 49; Fungi - 566; Plants - 2899; Viruses - 3; Other Eukaryotes - 8168 (source: NCBI BLink). & (gnl|cdd|47754 : 106.0) no description available & (q689g6|prr95_orysa : 90.1) Two-component response regulator-like PRR95 (Pseudo-response regulator 95) (OsPRR95) - Oryza sativa (Rice) & (reliability: 706.0) & (original description: Putative rr19, Description = Putative B-type response regulator 19, PFAM = PF00072;PF00249)' T '17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben101scf01664_60562-70169' '(at2g17820 : 1371.0) Encodes a member of the histidine kinase family.; histidine kinase 1 (HK1); FUNCTIONS IN: osmosensor activity, protein histidine kinase activity, histidine phosphotransfer kinase activity; INVOLVED IN: response to water deprivation, seed maturation, response to osmotic stress; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase (TAIR:AT2G47430.1); Has 149976 Blast hits to 132540 proteins in 3044 species: Archae - 792; Bacteria - 133304; Metazoa - 35; Fungi - 2288; Plants - 2106; Viruses - 27; Other Eukaryotes - 11424 (source: NCBI BLink). & (gnl|cdd|35739 : 242.0) no description available & (gnl|cdd|83720 : 196.0) no description available & (o81122|etr1_maldo : 103.0) Ethylene receptor (EC 2.7.13.3) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 2742.0) & (original description: Putative iK1, Description = Cold inducible histidine kinase 1, PFAM = PF00072;PF02518;PF00512)' T '17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben101scf02805_147535-151593' '(at2g25180 : 106.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 12 (RR12); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 10 (TAIR:AT4G31920.1); Has 111867 Blast hits to 110627 proteins in 3082 species: Archae - 684; Bacteria - 99498; Metazoa - 49; Fungi - 566; Plants - 2899; Viruses - 3; Other Eukaryotes - 8168 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative PGSC0003DMG400035052, Description = , PFAM = PF00072;PF00249)' T '17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben101scf03911_454358-462464' '(at1g27320 : 1315.0) Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2.; histidine kinase 3 (HK3); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 124308 Blast hits to 110912 proteins in 3043 species: Archae - 772; Bacteria - 110408; Metazoa - 31; Fungi - 2185; Plants - 2022; Viruses - 28; Other Eukaryotes - 8862 (source: NCBI BLink). & (gnl|cdd|35739 : 521.0) no description available & (gnl|cdd|83720 : 332.0) no description available & (o49230|etr1_braol : 146.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 2630.0) & (original description: Putative hk3, Description = Histidine kinase 3 variant 2, PFAM = PF03924;PF00072;PF00512;PF02518)' T '17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben101scf04554_372092-383229' '(at5g10720 : 956.0) member of Histidine Kinase; histidine kinase 5 (HK5); FUNCTIONS IN: protein histidine kinase activity; INVOLVED IN: cytokinin mediated signaling pathway; LOCATED IN: vacuole; EXPRESSED IN: male gametophyte, root; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (TAIR:AT5G10680.1); Has 142896 Blast hits to 126384 proteins in 3154 species: Archae - 1152; Bacteria - 126386; Metazoa - 257; Fungi - 2334; Plants - 2049; Viruses - 33; Other Eukaryotes - 10685 (source: NCBI BLink). & (gnl|cdd|35739 : 330.0) no description available & (gnl|cdd|83720 : 132.0) no description available & (o49230|etr1_braol : 123.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 1912.0) & (original description: Putative AHK5, Description = Histidine kinase 5, PFAM = PF00072;PF00512;PF02518)' T '17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben101scf06348_62645-67075' '(at3g16857 : 122.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 1 (RR1); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: response regulator 2 (TAIR:AT4G16110.1); Has 98862 Blast hits to 97820 proteins in 3027 species: Archae - 653; Bacteria - 87858; Metazoa - 53; Fungi - 404; Plants - 2787; Viruses - 5; Other Eukaryotes - 7102 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative PGSC0003DMG400038579, Description = , PFAM = PF00249)' T '17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben101scf08855_288221-297422' '(at2g01830 : 1282.0) Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane; WOODEN LEG (WOL); FUNCTIONS IN: osmosensor activity, cytokine binding, cytokinin receptor activity, protein histidine kinase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35739 : 493.0) no description available & (gnl|cdd|67535 : 231.0) no description available & (q9ssy6|etr1_cucsa : 151.0) Ethylene receptor (EC 2.7.13.3) (CS-ETR1) - Cucumis sativus (Cucumber) & (reliability: 2564.0) & (original description: Putative hk1, Description = Cytokinin receptor 1, PFAM = PF00512;PF02518;PF03924;PF00072)' T '17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben101scf09260_376887-386890' '(at2g01830 : 1299.0) Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane; WOODEN LEG (WOL); FUNCTIONS IN: osmosensor activity, cytokine binding, cytokinin receptor activity, protein histidine kinase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35739 : 493.0) no description available & (gnl|cdd|67535 : 231.0) no description available & (o49230|etr1_braol : 145.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 2598.0) & (original description: Putative HK4, Description = Probable histidine kinase 4, PFAM = PF02518;PF00072;PF00512;PF03924)' T '17.4.2' 'hormone metabolism.cytokinin.signal transduction' 'niben101scf18703_25185-41317' '(at5g35750 : 1330.0) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35739 : 505.0) no description available & (gnl|cdd|83720 : 347.0) no description available & (q9m7m1|etr1_prupe : 142.0) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 2660.0) & (original description: Putative hk2, Description = Histidine kinase 2, PFAM = PF03924;PF02518;PF00512;PF00072)' T '17.4.3' 'hormone metabolism.cytokinin.induced-regulated-responsive-activated' '' '' '17.5' 'hormone metabolism.ethylene' '' '' '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'nbv0.3scaffold17972_21210-36005' '(at4g36910 : 212.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|73086 : 83.6) no description available & (reliability: 408.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571;PF00571)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'nbv0.3scaffold19408_29148-34378' '(gnl|cdd|35365 : 211.0) no description available & (gnl|cdd|33294 : 177.0) no description available & (at3g11180 : 140.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 132.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 256.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'nbv0.3scaffold36220_1074-4533' '(at1g48420 : 195.0) Encodes an enzyme that decomposes D-cysteine into pyruvate, H2S, and NH3. Only D-cysteine but not L-cysteine was converted by D-CDes to pyruvate, H2S, and NH3. There is conflicting evidence on its 1-aminocyclopropane-1-carboxylate deaminase activity. Involved in regulating ethylene levels.; D-cysteine desulfhydrase (D-CDES); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate deaminase activity, D-cysteine desulfhydrase activity, cobalt ion binding, catalytic activity; INVOLVED IN: response to cadmium ion, ethylene biosynthetic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Pyridoxal phosphate-dependent deaminase (InterPro:IPR005966); BEST Arabidopsis thaliana protein match is: Pyridoxal-5'-phosphate-dependent enzyme family protein (TAIR:AT3G26115.1); Has 2814 Blast hits to 2813 proteins in 938 species: Archae - 31; Bacteria - 1992; Metazoa - 30; Fungi - 102; Plants - 101; Viruses - 0; Other Eukaryotes - 558 (source: NCBI BLink). & (gnl|cdd|81229 : 151.0) no description available & (reliability: 390.0) & (original description: Putative cuyA, Description = D-cysteine desulfhydrase, PFAM = PF00291)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'nbv0.5scaffold414_274001-348509' '(at4g36910 : 247.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|84873 : 98.1) no description available & (reliability: 476.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571;PF00571)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'nbv0.5scaffold1546_17778-27828' '(at5g59540 : 117.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G59530.1); Has 7263 Blast hits to 7229 proteins in 962 species: Archae - 0; Bacteria - 1031; Metazoa - 70; Fungi - 654; Plants - 4685; Viruses - 0; Other Eukaryotes - 823 (source: NCBI BLink). & (o04847|dv4h_catro : 93.6) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 83.5) no description available & (reliability: 234.0) & (original description: Putative BnaA09g50540D, Description = Desacetoxyvindoline 4-hydroxylase, putative, PFAM = PF14226)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'nbv0.5scaffold3164_84944-98626' '(gnl|cdd|35365 : 268.0) no description available & (at1g06650 : 247.0) encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G06640.1); Has 8180 Blast hits to 8149 proteins in 985 species: Archae - 0; Bacteria - 1067; Metazoa - 118; Fungi - 802; Plants - 4889; Viruses - 0; Other Eukaryotes - 1304 (source: NCBI BLink). & (o04847|dv4h_catro : 231.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|33294 : 140.0) no description available & (reliability: 492.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase-like protein, PFAM = PF14226;PF03171)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'nbv0.5scaffold3352_205636-222897' '(at4g36910 : 238.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|73134 : 92.6) no description available & (reliability: 442.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571;PF00571)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'nbv0.5scaffold5521_40017-44610' '(at1g06620 : 426.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 417.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 289.0) no description available & (gnl|cdd|33294 : 151.0) no description available & (reliability: 824.0) & (original description: Putative D4H, Description = Deacetoxyvindoline 4-hydroxylase, PFAM = PF14226;PF14226;PF03171)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben044scf00002391ctg020_4737-9976' '(at4g36910 : 142.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben044scf00010453ctg000_9797-18032' '(at3g51770 : 1282.0) Encodes a negative regulator of 1-aminocyclopropane-1-carboxylic acid synthase5(ACS5), which catalyze the rate-limiting step in ethylene biosynthesis. ETO1 directly interacts with ACS5 and inhibits its enzyme activity and targets it for degradation via proteasome-dependent pathway. It also interacts with CUL3 (a component of ubiquitin ligase complexes). eto1 (and eto3) mutations elevate ethylene biosynthesis by affecting the posttranscriptional regulation of ACS; ETHYLENE OVERPRODUCER 1 (ETO1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: ETO1-like 2 (TAIR:AT5G58550.1); Has 1321 Blast hits to 1075 proteins in 262 species: Archae - 34; Bacteria - 623; Metazoa - 134; Fungi - 2; Plants - 202; Viruses - 0; Other Eukaryotes - 326 (source: NCBI BLink). & (reliability: 2564.0) & (original description: Putative ETO1, Description = Ethylene-overproduction protein 1, PFAM = PF13181)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben044scf00019527ctg003_1072-3520' '(at5g58660 : 91.3) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G47190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative PGSC0003DMG400030362, Description = Gibberellin 2-beta-dioxygenase 8, PFAM = PF14226)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben044scf00020533ctg002_17814-20503' '(at1g06620 : 177.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 144.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 130.0) no description available & (gnl|cdd|33294 : 90.7) no description available & (reliability: 344.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase-like protein, PFAM = PF03171)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf00280_163898-178605' '(at4g36910 : 286.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|73086 : 103.0) no description available & (reliability: 518.0) & (original description: Putative CBSX1, Description = CBS domain-containing protein CBSX1, chloroplastic, PFAM = PF00571;PF00571)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf00415_85546-89896' '(at1g06620 : 400.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 340.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 288.0) no description available & (gnl|cdd|33294 : 160.0) no description available & (reliability: 778.0) & (original description: Putative ACO3, Description = 1-aminocyclopropane-1-carboxylate oxidase homolog, PFAM = PF03171;PF14226)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf00573_288263-295653' '(at5g58660 : 285.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G47190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35365 : 229.0) no description available & (gnl|cdd|33294 : 155.0) no description available & (q9sq80|g2ox1_pea : 126.0) Gibberellin 2-beta-dioxygenase 1 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 1) (Gibberellin 2-oxidase 1) (GA 2-oxidase 1) (Protein SLENDER) - Pisum sativum (Garden pea) & (reliability: 526.0) & (original description: Putative GA2ox5, Description = Gibberellin biosynthesis-related protein GA2ox5, PFAM = PF03171;PF14226)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf00951_56731-62315' '(at1g06620 : 423.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 382.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 303.0) no description available & (gnl|cdd|33294 : 155.0) no description available & (reliability: 794.0) & (original description: Putative p69RF, Description = 2OG-Fe(II) oxygenase family oxidoreductase, PFAM = PF14226;PF03171)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf01033_325722-342682' '(gnl|cdd|35365 : 269.0) no description available & (at1g06620 : 247.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 232.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|33294 : 140.0) no description available & (reliability: 492.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase-like protein, PFAM = PF03171;PF14226)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf02045_409197-413735' '(at3g12900 : 455.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G55290.1); Has 8653 Blast hits to 8615 proteins in 1001 species: Archae - 0; Bacteria - 1126; Metazoa - 119; Fungi - 1049; Plants - 4930; Viruses - 0; Other Eukaryotes - 1429 (source: NCBI BLink). & (gnl|cdd|35365 : 256.0) no description available & (gnl|cdd|33294 : 175.0) no description available & (o04847|dv4h_catro : 156.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 910.0) & (original description: Putative BnaC03g73320D, Description = BnaC03g73320D protein, PFAM = PF03171;PF14226)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf02063_238737-242446' '(at1g06620 : 431.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 375.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 303.0) no description available & (gnl|cdd|33294 : 167.0) no description available & (reliability: 826.0) & (original description: Putative ACO3, Description = 1-aminocyclopropane-1-carboxylate oxidase homolog, PFAM = PF03171;PF14226)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf02063_275991-280564' '(o04847|dv4h_catro : 139.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g06620 : 134.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (gnl|cdd|35365 : 83.9) no description available & (reliability: 264.0) & (original description: Putative p69RF, Description = Desacetoxyvindoline 4-hydroxylase, putative, PFAM = PF14226)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf02063_280565-289513' '(o04847|dv4h_catro : 379.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g06620 : 363.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (gnl|cdd|35365 : 276.0) no description available & (gnl|cdd|33294 : 154.0) no description available & (reliability: 702.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase isogeny 1, PFAM = PF14226;PF03171)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf02337_127789-132207' '(gnl|cdd|35365 : 210.0) no description available & (gnl|cdd|33294 : 178.0) no description available & (at3g11180 : 138.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 136.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 264.0) & (original description: Putative GA7ox1, Description = Flavonol synthase/flavanone 3-hydroxylase, PFAM = PF14226;PF03171)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf02362_335722-343753' '(at3g51770 : 1179.0) Encodes a negative regulator of 1-aminocyclopropane-1-carboxylic acid synthase5(ACS5), which catalyze the rate-limiting step in ethylene biosynthesis. ETO1 directly interacts with ACS5 and inhibits its enzyme activity and targets it for degradation via proteasome-dependent pathway. It also interacts with CUL3 (a component of ubiquitin ligase complexes). eto1 (and eto3) mutations elevate ethylene biosynthesis by affecting the posttranscriptional regulation of ACS; ETHYLENE OVERPRODUCER 1 (ETO1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: ETO1-like 2 (TAIR:AT5G58550.1); Has 1321 Blast hits to 1075 proteins in 262 species: Archae - 34; Bacteria - 623; Metazoa - 134; Fungi - 2; Plants - 202; Viruses - 0; Other Eukaryotes - 326 (source: NCBI BLink). & (reliability: 2358.0) & (original description: Putative ETO1, Description = Ethylene-overproduction protein 1, PFAM = PF13181)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf03009_520724-532775' '(at4g36910 : 276.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|73086 : 102.0) no description available & (reliability: 516.0) & (original description: Putative CBSX1, Description = CBS domain-containing protein CBSX1, chloroplastic, PFAM = PF00571;PF00571)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf03590_104512-107677' '(gnl|cdd|35365 : 194.0) no description available & (gnl|cdd|33294 : 136.0) no description available & (at5g08640 : 129.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o04847|dv4h_catro : 121.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 238.0) & (original description: Putative GA7ox1, Description = Flavonol synthase/flavanone 3-hydroxylase, PFAM = PF03171;PF14226)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf04117_98399-102659' '(at1g06620 : 314.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 312.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 275.0) no description available & (gnl|cdd|33294 : 158.0) no description available & (reliability: 606.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase isogeny 1, PFAM = PF14226;PF03171)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf04290_222702-226624' '(gnl|cdd|35365 : 213.0) no description available & (gnl|cdd|33294 : 174.0) no description available & (at2g30830 : 134.0) encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G30840.1); Has 8436 Blast hits to 8403 proteins in 1008 species: Archae - 0; Bacteria - 1171; Metazoa - 115; Fungi - 900; Plants - 4884; Viruses - 0; Other Eukaryotes - 1366 (source: NCBI BLink). & (q08506|acco1_pethy : 119.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 268.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf04908_7814-18534' '(at1g06620 : 330.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 318.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 253.0) no description available & (gnl|cdd|33294 : 123.0) no description available & (reliability: 632.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase isogeny 1, PFAM = PF03171;PF03171)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf04908_15158-18296' '(at1g06620 : 187.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 162.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 97.4) no description available & (reliability: 340.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase isogeny 1, PFAM = PF14226)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf04918_654737-658482' '(at5g20400 : 347.0) encodes a protein whose sequence is similar to flavanone 3 hydroxylase from Malus.; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G49390.1); Has 8498 Blast hits to 8450 proteins in 980 species: Archae - 0; Bacteria - 1051; Metazoa - 121; Fungi - 1005; Plants - 4926; Viruses - 0; Other Eukaryotes - 1395 (source: NCBI BLink). & (gnl|cdd|35365 : 281.0) no description available & (q07512|fls_pethy : 178.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Petunia hybrida (Petunia) & (gnl|cdd|33294 : 157.0) no description available & (reliability: 694.0) & (original description: Putative EFE, Description = EFE, PFAM = PF03171;PF14226)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf05135_667791-711776' '(at4g36910 : 261.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|73134 : 99.6) no description available & (reliability: 492.0) & (original description: Putative CBSX1, Description = CBS domain-containing protein CBSX1, chloroplastic, PFAM = PF00571;PF00571)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf05135_693850-714143' '(at4g36910 : 222.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|84873 : 83.4) no description available & (reliability: 414.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571;PF00571)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf06318_84012-92450' '(at3g51770 : 1277.0) Encodes a negative regulator of 1-aminocyclopropane-1-carboxylic acid synthase5(ACS5), which catalyze the rate-limiting step in ethylene biosynthesis. ETO1 directly interacts with ACS5 and inhibits its enzyme activity and targets it for degradation via proteasome-dependent pathway. It also interacts with CUL3 (a component of ubiquitin ligase complexes). eto1 (and eto3) mutations elevate ethylene biosynthesis by affecting the posttranscriptional regulation of ACS; ETHYLENE OVERPRODUCER 1 (ETO1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: ETO1-like 2 (TAIR:AT5G58550.1); Has 1321 Blast hits to 1075 proteins in 262 species: Archae - 34; Bacteria - 623; Metazoa - 134; Fungi - 2; Plants - 202; Viruses - 0; Other Eukaryotes - 326 (source: NCBI BLink). & (reliability: 2554.0) & (original description: Putative ETO1, Description = Ethylene-overproduction protein 1, PFAM = PF13181)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf06344_101468-112720' '(at4g36910 : 254.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|73086 : 96.4) no description available & (reliability: 504.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571;PF00571)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf06976_685454-689542' '(at4g37580 : 375.0) involved in apical hook development. putative N-acetyltransferase; HOOKLESS 1 (HLS1); CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G23060.1); Has 145 Blast hits to 145 proteins in 38 species: Archae - 22; Bacteria - 20; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 686.0) & (original description: Putative HLS1, Description = Probable N-acetyltransferase HLS1, PFAM = PF00583)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf07115_34791-39547' '(gnl|cdd|35365 : 208.0) no description available & (gnl|cdd|33294 : 176.0) no description available & (at3g11180 : 139.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 130.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 262.0) & (original description: Putative glysoja_034856, Description = Gibberellin 2-beta-dioxygenase 8, PFAM = PF03171;PF14226)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf07833_184590-188542' '(at1g06620 : 436.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 394.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 306.0) no description available & (gnl|cdd|33294 : 163.0) no description available & (reliability: 836.0) & (original description: Putative ACO3, Description = 1-aminocyclopropane-1-carboxylate oxidase homolog, PFAM = PF03171;PF14226)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf07987_132688-136577' '(at1g06620 : 413.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 380.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 283.0) no description available & (gnl|cdd|33294 : 153.0) no description available & (reliability: 784.0) & (original description: Putative p69RF, Description = 2OG-Fe(II) oxygenase family oxidoreductase, PFAM = PF14226;PF03171)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf08137_352829-363909' '(at1g48420 : 581.0) Encodes an enzyme that decomposes D-cysteine into pyruvate, H2S, and NH3. Only D-cysteine but not L-cysteine was converted by D-CDes to pyruvate, H2S, and NH3. There is conflicting evidence on its 1-aminocyclopropane-1-carboxylate deaminase activity. Involved in regulating ethylene levels.; D-cysteine desulfhydrase (D-CDES); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate deaminase activity, D-cysteine desulfhydrase activity, cobalt ion binding, catalytic activity; INVOLVED IN: response to cadmium ion, ethylene biosynthetic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Pyridoxal phosphate-dependent deaminase (InterPro:IPR005966); BEST Arabidopsis thaliana protein match is: Pyridoxal-5'-phosphate-dependent enzyme family protein (TAIR:AT3G26115.1); Has 2814 Blast hits to 2813 proteins in 938 species: Archae - 31; Bacteria - 1992; Metazoa - 30; Fungi - 102; Plants - 101; Viruses - 0; Other Eukaryotes - 558 (source: NCBI BLink). & (gnl|cdd|81229 : 308.0) no description available & (reliability: 1162.0) & (original description: Putative yedO, Description = D-cysteine desulfhydrase, PFAM = PF00291)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf08724_497483-501995' '(gnl|cdd|35365 : 209.0) no description available & (gnl|cdd|33294 : 168.0) no description available & (at3g11180 : 139.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (o04847|dv4h_catro : 122.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 272.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf10671_31679-34844' '(gnl|cdd|35365 : 197.0) no description available & (gnl|cdd|33294 : 133.0) no description available & (at5g08640 : 128.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o04847|dv4h_catro : 121.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 238.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T '17.5.1' 'hormone metabolism.ethylene.synthesis-degradation' 'niben101scf12919_49053-57883' '(at4g34120 : 253.0) LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 1 (LEJ1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G36910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73086 : 97.5) no description available & (reliability: 506.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571;PF00571)' T '17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'nbv0.3scaffold44344_3420-17227' '(at5g51690 : 633.0) Encodes an aminotransferase with broad specificity for aspartate and aromatic amino aids such as tyrosine and phenylalanine. It does not act on branched chain amino acids and does not have ACC synthase activity.; 1-amino-cyclopropane-1-carboxylate synthase 12 (ACS12); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: ACC synthase 10 (TAIR:AT1G62960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35477 : 547.0) no description available & (p37821|1a1c_maldo : 416.0) 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|84568 : 249.0) no description available & (reliability: 1266.0) & (original description: Putative ACS12, Description = Probable aminotransferase ACS12, PFAM = PF00155)' T '17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'nbv0.3scaffold73407_572-4357' '(q00257|1a12_cucma : 729.0) 1-aminocyclopropane-1-carboxylate synthase CMA101 (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Cucurbita maxima (Pumpkin) (Winter squash) & (at4g37770 : 721.0) Encodes an auxin inducible ACC synthase.; 1-amino-cyclopropane-1-carboxylate synthase 8 (ACS8); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: 1-aminocyclopropane-1-carboxylate synthase 4 (TAIR:AT2G22810.1); Has 32273 Blast hits to 32271 proteins in 2940 species: Archae - 857; Bacteria - 22542; Metazoa - 664; Fungi - 765; Plants - 1331; Viruses - 0; Other Eukaryotes - 6114 (source: NCBI BLink). & (gnl|cdd|35477 : 671.0) no description available & (gnl|cdd|84568 : 304.0) no description available & (reliability: 1442.0) & (original description: Putative ACS3, Description = 1-aminocyclopropane-1-carboxylate synthase 3, PFAM = PF00155)' T '17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'nbv0.3scaffold74419_1274-7291' '(at1g62960 : 631.0) Encodes an aminotransferase with broad specificity for aspartate and aromatic amino aids such as tyrosine and phenylalanine. It does not act on branched chain amino acids and does not have ACC synthase activity.; ACC synthase 10 (ACS10); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: 1-amino-cyclopropane-1-carboxylate synthase 12 (TAIR:AT5G51690.1); Has 24899 Blast hits to 24897 proteins in 2866 species: Archae - 734; Bacteria - 16849; Metazoa - 510; Fungi - 690; Plants - 1280; Viruses - 0; Other Eukaryotes - 4836 (source: NCBI BLink). & (gnl|cdd|35477 : 530.0) no description available & (p37821|1a1c_maldo : 406.0) 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|84568 : 260.0) no description available & (reliability: 1262.0) & (original description: Putative ACS10, Description = Probable aminotransferase ACS10, PFAM = PF00155)' T '17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben044scf00014495ctg012_1-2787' '(at4g26200 : 652.0) Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA.; 1-amino-cyclopropane-1-carboxylate synthase 7 (ACS7); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: 1-amino-cyclopropane-1-carboxylate synthase 8 (TAIR:AT4G37770.1); Has 33519 Blast hits to 33516 proteins in 2975 species: Archae - 937; Bacteria - 23616; Metazoa - 672; Fungi - 820; Plants - 1333; Viruses - 0; Other Eukaryotes - 6141 (source: NCBI BLink). & (gnl|cdd|35477 : 635.0) no description available & (q00257|1a12_cucma : 535.0) 1-aminocyclopropane-1-carboxylate synthase CMA101 (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|84568 : 291.0) no description available & (reliability: 1304.0) & (original description: Putative ACS7, Description = 1-aminocyclopropane-1-carboxylate synthase 7, PFAM = PF00155)' T '17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben044scf00032107ctg000_12967-17783' '(p37821|1a1c_maldo : 643.0) 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Malus domestica (Apple) (Malus sylvestris) & (at4g37770 : 642.0) Encodes an auxin inducible ACC synthase.; 1-amino-cyclopropane-1-carboxylate synthase 8 (ACS8); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: 1-aminocyclopropane-1-carboxylate synthase 4 (TAIR:AT2G22810.1); Has 32273 Blast hits to 32271 proteins in 2940 species: Archae - 857; Bacteria - 22542; Metazoa - 664; Fungi - 765; Plants - 1331; Viruses - 0; Other Eukaryotes - 6114 (source: NCBI BLink). & (gnl|cdd|35477 : 630.0) no description available & (gnl|cdd|84568 : 298.0) no description available & (reliability: 1284.0) & (original description: Putative ACS3, Description = 1-aminocyclopropane-1-carboxylate synthase 3, PFAM = PF00155)' T '17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben044scf00057969ctg000_1-3359' '(q00257|1a12_cucma : 753.0) 1-aminocyclopropane-1-carboxylate synthase CMA101 (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Cucurbita maxima (Pumpkin) (Winter squash) & (at4g37770 : 734.0) Encodes an auxin inducible ACC synthase.; 1-amino-cyclopropane-1-carboxylate synthase 8 (ACS8); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: 1-aminocyclopropane-1-carboxylate synthase 4 (TAIR:AT2G22810.1); Has 32273 Blast hits to 32271 proteins in 2940 species: Archae - 857; Bacteria - 22542; Metazoa - 664; Fungi - 765; Plants - 1331; Viruses - 0; Other Eukaryotes - 6114 (source: NCBI BLink). & (gnl|cdd|35477 : 673.0) no description available & (gnl|cdd|84568 : 315.0) no description available & (reliability: 1468.0) & (original description: Putative ACS3, Description = 1-aminocyclopropane-1-carboxylate synthase 3, PFAM = PF00155)' T '17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben101scf00108_536697-541277' '(at4g26200 : 669.0) Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA.; 1-amino-cyclopropane-1-carboxylate synthase 7 (ACS7); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: 1-amino-cyclopropane-1-carboxylate synthase 8 (TAIR:AT4G37770.1); Has 33519 Blast hits to 33516 proteins in 2975 species: Archae - 937; Bacteria - 23616; Metazoa - 672; Fungi - 820; Plants - 1333; Viruses - 0; Other Eukaryotes - 6141 (source: NCBI BLink). & (gnl|cdd|35477 : 649.0) no description available & (q00257|1a12_cucma : 538.0) 1-aminocyclopropane-1-carboxylate synthase CMA101 (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|84568 : 295.0) no description available & (reliability: 1338.0) & (original description: Putative ACS7, Description = 1-aminocyclopropane-1-carboxylate synthase 7, PFAM = PF00155)' T '17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben101scf00254_37098-42158' '(p31531|1a1c_soybn : 697.0) 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Glycine max (Soybean) & (at4g11280 : 651.0) encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family; 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 (ACS6); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: ACC synthase 1 (TAIR:AT3G61510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35477 : 645.0) no description available & (gnl|cdd|84568 : 310.0) no description available & (reliability: 1302.0) & (original description: Putative ACS1, Description = 1-aminocyclopropane-1-carboxylate synthase, PFAM = PF00155)' T '17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben101scf02053_54442-58184' '(p37821|1a1c_maldo : 712.0) 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Malus domestica (Apple) (Malus sylvestris) & (at4g37770 : 706.0) Encodes an auxin inducible ACC synthase.; 1-amino-cyclopropane-1-carboxylate synthase 8 (ACS8); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: 1-aminocyclopropane-1-carboxylate synthase 4 (TAIR:AT2G22810.1); Has 32273 Blast hits to 32271 proteins in 2940 species: Archae - 857; Bacteria - 22542; Metazoa - 664; Fungi - 765; Plants - 1331; Viruses - 0; Other Eukaryotes - 6114 (source: NCBI BLink). & (gnl|cdd|35477 : 652.0) no description available & (gnl|cdd|84568 : 297.0) no description available & (reliability: 1412.0) & (original description: Putative ACS3, Description = 1-aminocyclopropane-1-carboxylate synthase 3, PFAM = PF00155)' T '17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben101scf02334_14593-19274' '(p31531|1a1c_soybn : 714.0) 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Glycine max (Soybean) & (at4g11280 : 677.0) encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family; 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 (ACS6); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: ACC synthase 1 (TAIR:AT3G61510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35477 : 650.0) no description available & (gnl|cdd|84568 : 323.0) no description available & (reliability: 1354.0) & (original description: Putative ACS1, Description = 1-aminocyclopropane-1-carboxylate synthase, PFAM = PF00155)' T '17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben101scf02740_1575303-1580283' '(q00257|1a12_cucma : 726.0) 1-aminocyclopropane-1-carboxylate synthase CMA101 (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Cucurbita maxima (Pumpkin) (Winter squash) & (at4g37770 : 704.0) Encodes an auxin inducible ACC synthase.; 1-amino-cyclopropane-1-carboxylate synthase 8 (ACS8); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: 1-aminocyclopropane-1-carboxylate synthase 4 (TAIR:AT2G22810.1); Has 32273 Blast hits to 32271 proteins in 2940 species: Archae - 857; Bacteria - 22542; Metazoa - 664; Fungi - 765; Plants - 1331; Viruses - 0; Other Eukaryotes - 6114 (source: NCBI BLink). & (gnl|cdd|35477 : 675.0) no description available & (gnl|cdd|84568 : 318.0) no description available & (reliability: 1408.0) & (original description: Putative ACS3, Description = 1-aminocyclopropane-1-carboxylate synthase 3, PFAM = PF00155)' T '17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben101scf02816_549454-553060' '(at4g26200 : 664.0) Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA.; 1-amino-cyclopropane-1-carboxylate synthase 7 (ACS7); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: 1-amino-cyclopropane-1-carboxylate synthase 8 (TAIR:AT4G37770.1); Has 33519 Blast hits to 33516 proteins in 2975 species: Archae - 937; Bacteria - 23616; Metazoa - 672; Fungi - 820; Plants - 1333; Viruses - 0; Other Eukaryotes - 6141 (source: NCBI BLink). & (gnl|cdd|35477 : 638.0) no description available & (q00257|1a12_cucma : 533.0) 1-aminocyclopropane-1-carboxylate synthase CMA101 (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|84568 : 289.0) no description available & (reliability: 1328.0) & (original description: Putative ACS7, Description = 1-aminocyclopropane-1-carboxylate synthase 7, PFAM = PF00155)' T '17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben101scf03226_170954-177429' '(p31531|1a1c_soybn : 703.0) 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Glycine max (Soybean) & (at4g11280 : 661.0) encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family; 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 (ACS6); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: ACC synthase 1 (TAIR:AT3G61510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35477 : 645.0) no description available & (gnl|cdd|84568 : 324.0) no description available & (reliability: 1322.0) & (original description: Putative ACS2, Description = 1-aminocyclopropane-1-carboxylate synthase 2, PFAM = PF00155)' T '17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben101scf03907_131814-145189' '(at5g51690 : 625.0) Encodes an aminotransferase with broad specificity for aspartate and aromatic amino aids such as tyrosine and phenylalanine. It does not act on branched chain amino acids and does not have ACC synthase activity.; 1-amino-cyclopropane-1-carboxylate synthase 12 (ACS12); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: ACC synthase 10 (TAIR:AT1G62960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35477 : 547.0) no description available & (p37821|1a1c_maldo : 416.0) 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|84568 : 248.0) no description available & (reliability: 1250.0) & (original description: Putative ACS12, Description = Probable aminotransferase ACS12, PFAM = PF00155)' T '17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben101scf04773_10086-14463' '(p31531|1a1c_soybn : 684.0) 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Glycine max (Soybean) & (gnl|cdd|35477 : 635.0) no description available & (at3g61510 : 622.0) Encodes a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family. The gene is transcriptionally active but enzymatically inactive. The predicted amino-acid sequence of ACS1 is missing the highly conserved tripeptide, Thr-Asn-Pro (TNP), between Ile204 and Ser205. Introduction of TNP into ACS1 restores the ACS activity.; ACC synthase 1 (ACS1); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: 1-amino-cyclopropane-1-carboxylate synthase 2 (TAIR:AT1G01480.1); Has 22999 Blast hits to 22998 proteins in 2818 species: Archae - 808; Bacteria - 15898; Metazoa - 560; Fungi - 631; Plants - 1241; Viruses - 0; Other Eukaryotes - 3861 (source: NCBI BLink). & (gnl|cdd|84568 : 314.0) no description available & (reliability: 1244.0) & (original description: Putative Acs2, Description = ACC synthase ACS2, PFAM = PF00155)' T '17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben101scf05348_158839-169606' '(at1g62960 : 636.0) Encodes an aminotransferase with broad specificity for aspartate and aromatic amino aids such as tyrosine and phenylalanine. It does not act on branched chain amino acids and does not have ACC synthase activity.; ACC synthase 10 (ACS10); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: 1-amino-cyclopropane-1-carboxylate synthase 12 (TAIR:AT5G51690.1); Has 24899 Blast hits to 24897 proteins in 2866 species: Archae - 734; Bacteria - 16849; Metazoa - 510; Fungi - 690; Plants - 1280; Viruses - 0; Other Eukaryotes - 4836 (source: NCBI BLink). & (gnl|cdd|35477 : 534.0) no description available & (p37821|1a1c_maldo : 409.0) 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|84568 : 259.0) no description available & (reliability: 1272.0) & (original description: Putative ACS10, Description = Probable aminotransferase ACS10, PFAM = PF00155)' T '17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben101scf06180_83443-87965' '(p31531|1a1c_soybn : 717.0) 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Glycine max (Soybean) & (at4g11280 : 674.0) encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family; 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 (ACS6); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: ACC synthase 1 (TAIR:AT3G61510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35477 : 652.0) no description available & (gnl|cdd|84568 : 324.0) no description available & (reliability: 1348.0) & (original description: Putative ACS1, Description = 1-aminocyclopropane-1-carboxylate synthase, PFAM = PF00155)' T '17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben101scf09512_368746-373152' '(q07262|1a1c_tobac : 946.0) 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Nicotiana tabacum (Common tobacco) & (at1g01480 : 676.0) a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family, isolated from a flower-specific cDNA library.; 1-amino-cyclopropane-1-carboxylate synthase 2 (ACS2); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: ACC synthase 1 (TAIR:AT3G61510.1); Has 28365 Blast hits to 28364 proteins in 2923 species: Archae - 821; Bacteria - 19365; Metazoa - 634; Fungi - 793; Plants - 1286; Viruses - 0; Other Eukaryotes - 5466 (source: NCBI BLink). & (gnl|cdd|35477 : 665.0) no description available & (gnl|cdd|84568 : 346.0) no description available & (reliability: 1352.0) & (original description: Putative ACS1, Description = 1-aminocyclopropane-1-carboxylate synthase, PFAM = PF00155)' T '17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'niben101scf15817_137232-141122' '(q00257|1a12_cucma : 743.0) 1-aminocyclopropane-1-carboxylate synthase CMA101 (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Cucurbita maxima (Pumpkin) (Winter squash) & (at4g37770 : 737.0) Encodes an auxin inducible ACC synthase.; 1-amino-cyclopropane-1-carboxylate synthase 8 (ACS8); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: 1-aminocyclopropane-1-carboxylate synthase 4 (TAIR:AT2G22810.1); Has 32273 Blast hits to 32271 proteins in 2940 species: Archae - 857; Bacteria - 22542; Metazoa - 664; Fungi - 765; Plants - 1331; Viruses - 0; Other Eukaryotes - 6114 (source: NCBI BLink). & (gnl|cdd|35477 : 675.0) no description available & (gnl|cdd|84568 : 305.0) no description available & (reliability: 1474.0) & (original description: Putative ACS3, Description = 1-aminocyclopropane-1-carboxylate synthase 3, PFAM = PF00155)' T '17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'nbv0.3scaffold19383_19913-24487' '(at1g77330 : 449.0) similar to 1-aminocyclopropane-1-carboxylate oxidase GI:3386565 from (Sorghum bicolor); 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: ACC oxidase 2 (TAIR:AT1G62380.1); Has 8581 Blast hits to 8541 proteins in 996 species: Archae - 0; Bacteria - 1106; Metazoa - 118; Fungi - 1011; Plants - 4940; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (q00985|acco1_maldo : 321.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (Protein AP4) (PAE12) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|35365 : 293.0) no description available & (gnl|cdd|33294 : 172.0) no description available & (reliability: 898.0) & (original description: Putative aco, Description = 1-aminocyclopropane-1-carboxylic acid oxidase, PFAM = PF14226;PF03171)' T '17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'nbv0.3scaffold19408_29148-34378' '(gnl|cdd|35365 : 211.0) no description available & (gnl|cdd|33294 : 177.0) no description available & (at3g11180 : 140.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 132.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 264.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T '17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'nbv0.3scaffold97987_1-4005' '(q08507|acco3_pethy : 542.0) 1-aminocyclopropane-1-carboxylate oxidase 3 (EC 1.14.17.4) (ACC oxidase 3) (Ethylene-forming enzyme) (EFE) - Petunia hybrida (Petunia) & (at1g05010 : 446.0) Encodes 1-aminocyclopropane-1-carboxylate oxidase; ethylene-forming enzyme (EFE); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity; INVOLVED IN: response to fungus, ethylene biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8587 Blast hits to 8552 proteins in 1009 species: Archae - 0; Bacteria - 1142; Metazoa - 103; Fungi - 1035; Plants - 4924; Viruses - 0; Other Eukaryotes - 1383 (source: NCBI BLink). & (gnl|cdd|35365 : 264.0) no description available & (gnl|cdd|33294 : 146.0) no description available & (reliability: 892.0) & (original description: Putative ACO1, Description = 1-aminocyclopropane-1-carboxylate oxidase 1, PFAM = PF03171;PF14226)' T '17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'nbv0.5scaffold174_316947-321521' '(at1g77330 : 429.0) similar to 1-aminocyclopropane-1-carboxylate oxidase GI:3386565 from (Sorghum bicolor); 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: ACC oxidase 2 (TAIR:AT1G62380.1); Has 8581 Blast hits to 8541 proteins in 996 species: Archae - 0; Bacteria - 1106; Metazoa - 118; Fungi - 1011; Plants - 4940; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (q00985|acco1_maldo : 307.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (Protein AP4) (PAE12) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|35365 : 288.0) no description available & (gnl|cdd|33294 : 171.0) no description available & (reliability: 858.0) & (original description: Putative aco, Description = 1-aminocyclopropane-1-carboxylic acid oxidase, PFAM = PF14226;PF03171)' T '17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben044scf00004103ctg003_1-1557' '(at1g77330 : 309.0) similar to 1-aminocyclopropane-1-carboxylate oxidase GI:3386565 from (Sorghum bicolor); 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: ACC oxidase 2 (TAIR:AT1G62380.1); Has 8581 Blast hits to 8541 proteins in 996 species: Archae - 0; Bacteria - 1106; Metazoa - 118; Fungi - 1011; Plants - 4940; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (p31237|acco_actch : 254.0) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4) (ACC oxidase) (Ethylene-forming enzyme) (EFE) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|35365 : 203.0) no description available & (gnl|cdd|33294 : 124.0) no description available & (reliability: 618.0) & (original description: Putative acco1, Description = 1-aminocyclopropane-1-carboxylic acid oxidase, PFAM = PF03171)' T '17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben044scf00006907ctg030_1-3500' '(at1g77330 : 424.0) similar to 1-aminocyclopropane-1-carboxylate oxidase GI:3386565 from (Sorghum bicolor); 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: ACC oxidase 2 (TAIR:AT1G62380.1); Has 8581 Blast hits to 8541 proteins in 996 species: Archae - 0; Bacteria - 1106; Metazoa - 118; Fungi - 1011; Plants - 4940; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (o48882|acco2_maldo : 309.0) 1-aminocyclopropane-1-carboxylate oxidase 2 (EC 1.14.17.4) (ACC oxidase 2) (Ethylene-forming enzyme) (EFE) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|35365 : 289.0) no description available & (gnl|cdd|33294 : 164.0) no description available & (reliability: 848.0) & (original description: Putative aco, Description = 1-aminocyclopropane-1-carboxylic acid oxidase, PFAM = PF14226;PF03171)' T '17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben044scf00012234ctg002_18563-22253' '(at1g77330 : 449.0) similar to 1-aminocyclopropane-1-carboxylate oxidase GI:3386565 from (Sorghum bicolor); 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: ACC oxidase 2 (TAIR:AT1G62380.1); Has 8581 Blast hits to 8541 proteins in 996 species: Archae - 0; Bacteria - 1106; Metazoa - 118; Fungi - 1011; Plants - 4940; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (q00985|acco1_maldo : 320.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (Protein AP4) (PAE12) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|35365 : 295.0) no description available & (gnl|cdd|33294 : 173.0) no description available & (reliability: 898.0) & (original description: Putative aco, Description = 1-aminocyclopropane-1-carboxylic acid oxidase, PFAM = PF03171;PF14226)' T '17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben044scf00016127ctg003_1-4186' '(q08507|acco3_pethy : 573.0) 1-aminocyclopropane-1-carboxylate oxidase 3 (EC 1.14.17.4) (ACC oxidase 3) (Ethylene-forming enzyme) (EFE) - Petunia hybrida (Petunia) & (at1g05010 : 464.0) Encodes 1-aminocyclopropane-1-carboxylate oxidase; ethylene-forming enzyme (EFE); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity; INVOLVED IN: response to fungus, ethylene biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8587 Blast hits to 8552 proteins in 1009 species: Archae - 0; Bacteria - 1142; Metazoa - 103; Fungi - 1035; Plants - 4924; Viruses - 0; Other Eukaryotes - 1383 (source: NCBI BLink). & (gnl|cdd|35365 : 278.0) no description available & (gnl|cdd|33294 : 163.0) no description available & (reliability: 928.0) & (original description: Putative ACO1, Description = 1-aminocyclopropane-1-carboxylate oxidase 1, PFAM = PF14226;PF03171)' T '17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf00430_12401-16263' '(at1g77330 : 430.0) similar to 1-aminocyclopropane-1-carboxylate oxidase GI:3386565 from (Sorghum bicolor); 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: ACC oxidase 2 (TAIR:AT1G62380.1); Has 8581 Blast hits to 8541 proteins in 996 species: Archae - 0; Bacteria - 1106; Metazoa - 118; Fungi - 1011; Plants - 4940; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (o48882|acco2_maldo : 307.0) 1-aminocyclopropane-1-carboxylate oxidase 2 (EC 1.14.17.4) (ACC oxidase 2) (Ethylene-forming enzyme) (EFE) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|35365 : 284.0) no description available & (gnl|cdd|33294 : 161.0) no description available & (reliability: 860.0) & (original description: Putative aco, Description = 1-aminocyclopropane-1-carboxylate oxidase, PFAM = PF14226;PF03171)' T '17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf02337_127789-132207' '(gnl|cdd|35365 : 210.0) no description available & (gnl|cdd|33294 : 178.0) no description available & (at3g11180 : 138.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 136.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 266.0) & (original description: Putative GA7ox1, Description = Flavonol synthase/flavanone 3-hydroxylase, PFAM = PF14226;PF03171)' T '17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf02433_657502-662090' '(q08507|acco3_pethy : 469.0) 1-aminocyclopropane-1-carboxylate oxidase 3 (EC 1.14.17.4) (ACC oxidase 3) (Ethylene-forming enzyme) (EFE) - Petunia hybrida (Petunia) & (at1g05010 : 419.0) Encodes 1-aminocyclopropane-1-carboxylate oxidase; ethylene-forming enzyme (EFE); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity; INVOLVED IN: response to fungus, ethylene biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8587 Blast hits to 8552 proteins in 1009 species: Archae - 0; Bacteria - 1142; Metazoa - 103; Fungi - 1035; Plants - 4924; Viruses - 0; Other Eukaryotes - 1383 (source: NCBI BLink). & (gnl|cdd|35365 : 266.0) no description available & (gnl|cdd|33294 : 153.0) no description available & (reliability: 838.0) & (original description: Putative aco1, Description = 1-aminocyclopropane-1-carboxylate oxidase, PFAM = PF14226;PF03171)' T '17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf02543_124693-129416' '(q08507|acco3_pethy : 574.0) 1-aminocyclopropane-1-carboxylate oxidase 3 (EC 1.14.17.4) (ACC oxidase 3) (Ethylene-forming enzyme) (EFE) - Petunia hybrida (Petunia) & (at1g05010 : 463.0) Encodes 1-aminocyclopropane-1-carboxylate oxidase; ethylene-forming enzyme (EFE); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity; INVOLVED IN: response to fungus, ethylene biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8587 Blast hits to 8552 proteins in 1009 species: Archae - 0; Bacteria - 1142; Metazoa - 103; Fungi - 1035; Plants - 4924; Viruses - 0; Other Eukaryotes - 1383 (source: NCBI BLink). & (gnl|cdd|35365 : 279.0) no description available & (gnl|cdd|33294 : 163.0) no description available & (reliability: 926.0) & (original description: Putative ACO1, Description = 1-aminocyclopropane-1-carboxylate oxidase 1, PFAM = PF03171;PF14226)' T '17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf02860_433510-437736' '(q08507|acco3_pethy : 129.0) 1-aminocyclopropane-1-carboxylate oxidase 3 (EC 1.14.17.4) (ACC oxidase 3) (Ethylene-forming enzyme) (EFE) - Petunia hybrida (Petunia) & (at1g62380 : 124.0) Encodes a protein similar to 1-aminocyclopropane-1-carboxylic oxidase (ACC oxidase). Expression of the AtACO2 transcripts is affected by ethylene.; ACC oxidase 2 (ACO2); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity, copper ion binding; INVOLVED IN: response to salt stress, detection of ethylene stimulus, ethylene biosynthetic process; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8564 Blast hits to 8520 proteins in 992 species: Archae - 0; Bacteria - 1100; Metazoa - 104; Fungi - 1037; Plants - 4951; Viruses - 0; Other Eukaryotes - 1372 (source: NCBI BLink). & (gnl|cdd|35365 : 109.0) no description available & (reliability: 248.0) & (original description: Putative aco, Description = 1-aminocyclopropane-1-carboxylate oxidase, PFAM = PF03171)' T '17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf02918_1610-5436' '(q08507|acco3_pethy : 561.0) 1-aminocyclopropane-1-carboxylate oxidase 3 (EC 1.14.17.4) (ACC oxidase 3) (Ethylene-forming enzyme) (EFE) - Petunia hybrida (Petunia) & (at1g05010 : 461.0) Encodes 1-aminocyclopropane-1-carboxylate oxidase; ethylene-forming enzyme (EFE); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity; INVOLVED IN: response to fungus, ethylene biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8587 Blast hits to 8552 proteins in 1009 species: Archae - 0; Bacteria - 1142; Metazoa - 103; Fungi - 1035; Plants - 4924; Viruses - 0; Other Eukaryotes - 1383 (source: NCBI BLink). & (gnl|cdd|35365 : 282.0) no description available & (gnl|cdd|33294 : 161.0) no description available & (reliability: 922.0) & (original description: Putative ACO1, Description = 1-aminocyclopropane-1-carboxylate oxidase 1, PFAM = PF03171;PF14226)' T '17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf03590_173893-177150' '(gnl|cdd|35365 : 207.0) no description available & (gnl|cdd|33294 : 177.0) no description available & (at5g08640 : 138.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o48882|acco2_maldo : 128.0) 1-aminocyclopropane-1-carboxylate oxidase 2 (EC 1.14.17.4) (ACC oxidase 2) (Ethylene-forming enzyme) (EFE) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 252.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T '17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf04290_222702-226624' '(gnl|cdd|35365 : 213.0) no description available & (gnl|cdd|33294 : 174.0) no description available & (at2g30830 : 134.0) encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G30840.1); Has 8436 Blast hits to 8403 proteins in 1008 species: Archae - 0; Bacteria - 1171; Metazoa - 115; Fungi - 900; Plants - 4884; Viruses - 0; Other Eukaryotes - 1366 (source: NCBI BLink). & (q08506|acco1_pethy : 119.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 244.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T '17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf07115_34791-39547' '(gnl|cdd|35365 : 208.0) no description available & (gnl|cdd|33294 : 176.0) no description available & (at3g11180 : 139.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 130.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 260.0) & (original description: Putative glysoja_034856, Description = Gibberellin 2-beta-dioxygenase 8, PFAM = PF03171;PF14226)' T '17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf09217_81367-84803' '(p31237|acco_actch : 500.0) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4) (ACC oxidase) (Ethylene-forming enzyme) (EFE) - Actinidia chinensis (Kiwi) (Yangtao) & (at1g05010 : 458.0) Encodes 1-aminocyclopropane-1-carboxylate oxidase; ethylene-forming enzyme (EFE); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity; INVOLVED IN: response to fungus, ethylene biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8587 Blast hits to 8552 proteins in 1009 species: Archae - 0; Bacteria - 1142; Metazoa - 103; Fungi - 1035; Plants - 4924; Viruses - 0; Other Eukaryotes - 1383 (source: NCBI BLink). & (gnl|cdd|35365 : 278.0) no description available & (gnl|cdd|33294 : 160.0) no description available & (reliability: 916.0) & (original description: Putative aco, Description = Aco protein, PFAM = PF03171;PF14226)' T '17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf09590_356767-360195' '(q08507|acco3_pethy : 505.0) 1-aminocyclopropane-1-carboxylate oxidase 3 (EC 1.14.17.4) (ACC oxidase 3) (Ethylene-forming enzyme) (EFE) - Petunia hybrida (Petunia) & (at1g05010 : 459.0) Encodes 1-aminocyclopropane-1-carboxylate oxidase; ethylene-forming enzyme (EFE); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity; INVOLVED IN: response to fungus, ethylene biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8587 Blast hits to 8552 proteins in 1009 species: Archae - 0; Bacteria - 1142; Metazoa - 103; Fungi - 1035; Plants - 4924; Viruses - 0; Other Eukaryotes - 1383 (source: NCBI BLink). & (gnl|cdd|35365 : 279.0) no description available & (gnl|cdd|33294 : 154.0) no description available & (reliability: 918.0) & (original description: Putative ACO, Description = 1-aminocyclopropane-1-carboxylate oxidase, PFAM = PF14226;PF03171)' T '17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf13622_173696-177083' '(p31237|acco_actch : 493.0) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4) (ACC oxidase) (Ethylene-forming enzyme) (EFE) - Actinidia chinensis (Kiwi) (Yangtao) & (at1g05010 : 457.0) Encodes 1-aminocyclopropane-1-carboxylate oxidase; ethylene-forming enzyme (EFE); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity; INVOLVED IN: response to fungus, ethylene biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8587 Blast hits to 8552 proteins in 1009 species: Archae - 0; Bacteria - 1142; Metazoa - 103; Fungi - 1035; Plants - 4924; Viruses - 0; Other Eukaryotes - 1383 (source: NCBI BLink). & (gnl|cdd|35365 : 277.0) no description available & (gnl|cdd|33294 : 163.0) no description available & (reliability: 914.0) & (original description: Putative ACO2, Description = ACC oxidase, PFAM = PF14226;PF03171)' T '17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf14041_85437-89127' '(at1g77330 : 428.0) similar to 1-aminocyclopropane-1-carboxylate oxidase GI:3386565 from (Sorghum bicolor); 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: ACC oxidase 2 (TAIR:AT1G62380.1); Has 8581 Blast hits to 8541 proteins in 996 species: Archae - 0; Bacteria - 1106; Metazoa - 118; Fungi - 1011; Plants - 4940; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (q00985|acco1_maldo : 306.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (Protein AP4) (PAE12) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|35365 : 290.0) no description available & (gnl|cdd|33294 : 171.0) no description available & (reliability: 856.0) & (original description: Putative aco, Description = 1-aminocyclopropane-1-carboxylic acid oxidase, PFAM = PF14226;PF03171)' T '17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf14041_86860-127274' '(at1g77330 : 306.0) similar to 1-aminocyclopropane-1-carboxylate oxidase GI:3386565 from (Sorghum bicolor); 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: ACC oxidase 2 (TAIR:AT1G62380.1); Has 8581 Blast hits to 8541 proteins in 996 species: Archae - 0; Bacteria - 1106; Metazoa - 118; Fungi - 1011; Plants - 4940; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (p31237|acco_actch : 247.0) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4) (ACC oxidase) (Ethylene-forming enzyme) (EFE) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|35365 : 201.0) no description available & (gnl|cdd|33294 : 124.0) no description available & (reliability: 612.0) & (original description: Putative acco1, Description = 1-aminocyclopropane-1-carboxylic acid oxidase, PFAM = PF03171)' T '17.5.1.2' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase' 'niben101scf15670_37034-40204' '(at2g19590 : 426.0) encodes a protein whose sequence is similar to 1-aminocyclopropane-1-carboxylate oxidase; ACC oxidase 1 (ACO1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 7815 Blast hits to 7777 proteins in 927 species: Archae - 0; Bacteria - 960; Metazoa - 67; Fungi - 764; Plants - 4878; Viruses - 0; Other Eukaryotes - 1146 (source: NCBI BLink). & (p31237|acco_actch : 323.0) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4) (ACC oxidase) (Ethylene-forming enzyme) (EFE) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|35365 : 243.0) no description available & (gnl|cdd|33294 : 130.0) no description available & (reliability: 852.0) & (original description: Putative aco5, Description = 1-aminocyclopropane-1-carboxylate oxidase, PFAM = PF03171;PF14226)' T '17.5.1.20' 'hormone metabolism.ethylene.synthesis-degradation.XBAT32' 'niben101scf03189_135244-142311' '(at5g57740 : 590.0) ubiquitin ligase; XB3 ortholog 2 in Arabidopsis thaliana (XBAT32); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 3 in Arabidopsis thaliana (TAIR:AT5G07270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35730 : 102.0) no description available & (gnl|cdd|29261 : 98.6) no description available & (reliability: 1180.0) & (original description: Putative BnaA02g35390D, Description = BnaA02g35390D protein, PFAM = PF12796;PF12796;PF12796)' T '17.5.1.20' 'hormone metabolism.ethylene.synthesis-degradation.XBAT32' 'niben101scf06275_556274-564529' '(at5g57740 : 592.0) ubiquitin ligase; XB3 ortholog 2 in Arabidopsis thaliana (XBAT32); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 3 in Arabidopsis thaliana (TAIR:AT5G07270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35730 : 105.0) no description available & (gnl|cdd|29261 : 103.0) no description available & (reliability: 1184.0) & (original description: Putative XBOS32, Description = Probable E3 ubiquitin-protein ligase XBOS32, PFAM = PF12796;PF12796;PF12796)' T '17.5.1.1001' 'hormone metabolism.ethylene.synthesis-degradation' '1-aminocyclopropanecarboxylate' 'ethylene biosynthesis precursor' M '17.5.1.1002' 'hormone metabolism.ethylene.synthesis-degradation' '(s)-trans-2-amino-4-(2-aminoethoxy)-3-butenoate' 'ethylene biosynthesis inhibitor' M '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold6870_35836-38638' '(at2g31230 : 110.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene-responsive element binding factor 15 (ERF15); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: chloroplast; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: octadecanoid-responsive Arabidopsis AP2/ERF 59 (TAIR:AT1G06160.1); Has 7638 Blast hits to 6656 proteins in 461 species: Archae - 0; Bacteria - 190; Metazoa - 867; Fungi - 122; Plants - 5748; Viruses - 12; Other Eukaryotes - 699 (source: NCBI BLink). & (q40479|erf2_tobac : 80.9) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NtERF2) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 80.7) no description available & (reliability: 220.0) & (original description: Putative erf1, Description = Ethylene-responsive transcription factor 1B, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold8106_33270-36680' '(gnl|cdd|47695 : 96.1) no description available & (at1g28160 : 94.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5516 Blast hits to 5465 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 5459; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative bd1, Description = AP2 domain class transcription factor, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold8231_25097-29207' '(at2g23060 : 552.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, leaf whorl, flower, pedicel, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT4G37580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1092.0) & (original description: Putative At2g23060, Description = Probable N-acetyltransferase HLS1-like, PFAM = PF00583)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold11028_4516-7391' '(q40478|erf5_tobac : 426.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) - Nicotiana tabacum (Common tobacco) & (at5g51190 : 176.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 104 (TAIR:AT5G61600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47695 : 110.0) no description available & (reliability: 352.0) & (original description: Putative ERF5, Description = Ethylene-responsive transcription factor 5, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold14682_1-2701' '(gnl|cdd|47695 : 112.0) no description available & (q9lw49|erf4_nicsy : 96.7) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (at5g44210 : 95.1) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; erf domain protein 9 (ERF9); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ERF domain protein 10 (TAIR:AT1G03800.1); Has 6203 Blast hits to 5781 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6179; Viruses - 2; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative ERF3, Description = Ethylene response factor 3, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold16114_29221-33646' '(gnl|cdd|47695 : 107.0) no description available & (at1g28370 : 106.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ERF domain protein 11 (ERF11); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 (TAIR:AT3G15210.1); Has 6129 Blast hits to 5763 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6120; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (q9lw49|erf4_nicsy : 102.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 212.0) & (original description: Putative ap2, Description = Ethylene response factor, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold23018_23826-26563' '(at4g34410 : 115.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; redox responsive transcription factor 1 (RRTF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6148 Blast hits to 5821 proteins in 258 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|47695 : 114.0) no description available & (q6k7e6|erf1_orysa : 81.3) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 230.0) & (original description: Putative AP2, Description = Ethylene-responsive transcription factor, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold23777_2663-5412' '(gnl|cdd|47695 : 116.0) no description available & (at4g34410 : 100.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; redox responsive transcription factor 1 (RRTF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6148 Blast hits to 5821 proteins in 258 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative ERF2, Description = ERF2 protein, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold24293_25584-29320' '(at5g13910 : 118.0) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (LEAFY PETIOLE). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. Acts as a positive regulator of gibberellic acid-induced germination.; LEAFY PETIOLE (LEP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G28160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 89.5) no description available & (q9lw49|erf4_nicsy : 81.6) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 234.0) & (original description: Putative erf, Description = Ethylene responsive transcription factor (ERF) like protein, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold25098_5545-8288' '(at4g34410 : 115.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; redox responsive transcription factor 1 (RRTF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6148 Blast hits to 5821 proteins in 258 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|47695 : 114.0) no description available & (q6k7e6|erf1_orysa : 84.3) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 230.0) & (original description: Putative ERF2, Description = ERF2 protein, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold29041_14831-17445' '(at5g07580 : 152.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61590.1); Has 5961 Blast hits to 5673 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5951; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (q40478|erf5_tobac : 112.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 103.0) no description available & (reliability: 304.0) & (original description: Putative ERF106, Description = Ethylene-responsive transcription factor ERF106, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold40000_3276-5794' '(gnl|cdd|47695 : 98.0) no description available & (q9lw49|erf4_nicsy : 89.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (at1g50640 : 85.9) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-3). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ethylene responsive element binding factor 3 (ERF3); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 7 (TAIR:AT3G20310.1); Has 5989 Blast hits to 5713 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 5972; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative erf, Description = AP2 domain class transcription factor, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold46095_13290-16159' '(q9lw49|erf4_nicsy : 144.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 118.0) no description available & (at5g44210 : 94.4) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; erf domain protein 9 (ERF9); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ERF domain protein 10 (TAIR:AT1G03800.1); Has 6203 Blast hits to 5781 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6179; Viruses - 2; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative ERF4, Description = Ethylene-responsive transcription factor 4, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold47349_836-4152' '(gnl|cdd|66792 : 240.0) no description available & (at4g31980 : 179.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative , Description = , PFAM = PF03140)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold60240_8582-11316' '(q9lw48|erf5_nicsy : 350.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NsERF4) - Nicotiana sylvestris (Wood tobacco) & (at5g51190 : 169.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 104 (TAIR:AT5G61600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47695 : 106.0) no description available & (reliability: 338.0) & (original description: Putative ERF5, Description = Ethylene-responsive transcription factor 5, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold76206_3295-6245' '(at2g31230 : 129.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene-responsive element binding factor 15 (ERF15); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: chloroplast; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: octadecanoid-responsive Arabidopsis AP2/ERF 59 (TAIR:AT1G06160.1); Has 7638 Blast hits to 6656 proteins in 461 species: Archae - 0; Bacteria - 190; Metazoa - 867; Fungi - 122; Plants - 5748; Viruses - 12; Other Eukaryotes - 699 (source: NCBI BLink). & (q9lw50|erf2_nicsy : 97.4) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 97.2) no description available & (reliability: 258.0) & (original description: Putative erf1, Description = Ethylene-responsive transcription factor 1B, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold78351_629-3483' '(gnl|cdd|47695 : 113.0) no description available & (at4g34410 : 102.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; redox responsive transcription factor 1 (RRTF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6148 Blast hits to 5821 proteins in 258 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative ERF2, Description = EREBP-like factor, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold90269_3048-5398' '(at1g28360 : 119.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ERF12). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ERF domain protein 12 (ERF12); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 (TAIR:AT3G15210.1); Has 5550 Blast hits to 5447 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 5541; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q9lw49|erf4_nicsy : 102.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 99.2) no description available & (reliability: 238.0) & (original description: Putative ERF12, Description = Ethylene-responsive transcription factor 12, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold100345_370-3846' '(gnl|cdd|47695 : 94.5) no description available & (at1g28160 : 94.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5516 Blast hits to 5465 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 5459; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative bd1, Description = AP2 domain class transcription factor, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.3scaffold101653_1248-3837' '(q40478|erf5_tobac : 224.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) - Nicotiana tabacum (Common tobacco) & (at5g51190 : 141.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 104 (TAIR:AT5G61600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47695 : 110.0) no description available & (reliability: 282.0) & (original description: Putative ERF3, Description = Ethylene response factor ERF3, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold336_317655-340055' '(gnl|cdd|47695 : 113.0) no description available & (q9lw49|erf4_nicsy : 99.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (at5g44210 : 95.9) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; erf domain protein 9 (ERF9); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ERF domain protein 10 (TAIR:AT1G03800.1); Has 6203 Blast hits to 5781 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6179; Viruses - 2; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative ERF3, Description = Ethylene response factor 3, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold879_563773-566444' '(gnl|cdd|47695 : 110.0) no description available & (at3g15210 : 100.0) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-4). The protein contains one AP2 domain. Acts as a negative regulator of JA-responsive defense gene expression and resistance to the necrotrophic fungal pathogen Fusarium oxysporum and antagonizes JA inhibition of root elongation.; ethylene responsive element binding factor 4 (ERF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 8 (TAIR:AT1G53170.1); Has 6170 Blast hits to 5786 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6156; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (q9lw49|erf4_nicsy : 98.2) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 200.0) & (original description: Putative ERF3, Description = Ethylene response factor 3, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold1166_25018-27545' '(at3g50260 : 134.0) Encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. Involved in defense and freezing stress responses. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; cooperatively regulated by ethylene and jasmonate 1 (CEJ1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: DREB and EAR motif protein 2 (TAIR:AT5G67190.1); Has 5544 Blast hits to 5466 proteins in 235 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5538; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|47695 : 97.6) no description available & (reliability: 268.0) & (original description: Putative ERF011, Description = Ethylene-responsive transcription factor ERF011, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold1447_429530-432198' '(q9sxs8|erf3_tobac : 207.0) Ethylene-responsive transcription factor 3 (Ethylene-responsive element-binding factor 3 homolog) (EREBP-5) (NtERF5) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 105.0) no description available & (at1g50640 : 94.7) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-3). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ethylene responsive element binding factor 3 (ERF3); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 7 (TAIR:AT3G20310.1); Has 5989 Blast hits to 5713 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 5972; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative ATF2, Description = Ethylene-responsive transcription factor 3, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold1630_257324-260800' '(at5g13910 : 99.0) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (LEAFY PETIOLE). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. Acts as a positive regulator of gibberellic acid-induced germination.; LEAFY PETIOLE (LEP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G28160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 94.9) no description available & (reliability: 188.0) & (original description: Putative bd1, Description = AP2 domain class transcription factor, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold1916_193891-197627' '(at5g13910 : 119.0) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (LEAFY PETIOLE). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. Acts as a positive regulator of gibberellic acid-induced germination.; LEAFY PETIOLE (LEP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G28160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 89.2) no description available & (q9lw49|erf4_nicsy : 81.3) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 234.0) & (original description: Putative bd1, Description = AP2 domain class transcription factor, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold1916_215466-218876' '(gnl|cdd|47695 : 94.2) no description available & (at1g28160 : 92.8) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5516 Blast hits to 5465 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 5459; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 185.6) & (original description: Putative bd1, Description = AP2 domain class transcription factor, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold2554_36640-39581' '(at5g47230 : 144.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-5). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene responsive element binding factor 5 (ERF5); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 6 (TAIR:AT4G17490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q40478|erf5_tobac : 132.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 106.0) no description available & (reliability: 288.0) & (original description: Putative ACRE1, Description = Avr9/Cf-9 rapidly elicited protein 1, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold2842_63197-66067' '(at4g17500 : 149.0) Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene responsive element binding factor 1 (ERF-1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 2 (TAIR:AT5G47220.1); Has 5773 Blast hits to 5650 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5761; Viruses - 2; Other Eukaryotes - 10 (source: NCBI BLink). & (q9lw50|erf2_nicsy : 125.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 106.0) no description available & (reliability: 298.0) & (original description: Putative ERF1A, Description = Ethylene-responsive transcription factor 1A, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold3078_233138-235851' '(gnl|cdd|47695 : 113.0) no description available & (at3g15210 : 105.0) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-4). The protein contains one AP2 domain. Acts as a negative regulator of JA-responsive defense gene expression and resistance to the necrotrophic fungal pathogen Fusarium oxysporum and antagonizes JA inhibition of root elongation.; ethylene responsive element binding factor 4 (ERF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 8 (TAIR:AT1G53170.1); Has 6170 Blast hits to 5786 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6156; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (q9lw49|erf4_nicsy : 100.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 210.0) & (original description: Putative ERF4, Description = Ethylene-responsive transcription factor 4, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold3587_105717-108119' '(at3g23240 : 90.5) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.; ethylene response factor 1 (ERF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding factor 15 (TAIR:AT2G31230.1); Has 5944 Blast hits to 5682 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5925; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 81.8) no description available & (reliability: 181.0) & (original description: Putative erf1, Description = Ethylene-responsive transcription factor 1B, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold5114_84352-87026' '(q9sxs8|erf3_tobac : 217.0) Ethylene-responsive transcription factor 3 (Ethylene-responsive element-binding factor 3 homolog) (EREBP-5) (NtERF5) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 104.0) no description available & (at1g50640 : 96.7) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-3). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ethylene responsive element binding factor 3 (ERF3); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 7 (TAIR:AT3G20310.1); Has 5989 Blast hits to 5713 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 5972; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative ERF3, Description = Ethylene-responsive transcription factor 3, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold6623_64922-75375' '(at4g34410 : 112.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; redox responsive transcription factor 1 (RRTF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6148 Blast hits to 5821 proteins in 258 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|47695 : 111.0) no description available & (q6k7e6|erf1_orysa : 81.6) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 224.0) & (original description: Putative WRAF2, Description = Wound-responsive AP2 like factor 2, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold6678_40927-73570' '(at2g31230 : 101.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene-responsive element binding factor 15 (ERF15); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: chloroplast; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: octadecanoid-responsive Arabidopsis AP2/ERF 59 (TAIR:AT1G06160.1); Has 7638 Blast hits to 6656 proteins in 461 species: Archae - 0; Bacteria - 190; Metazoa - 867; Fungi - 122; Plants - 5748; Viruses - 12; Other Eukaryotes - 699 (source: NCBI BLink). & (gnl|cdd|47695 : 95.7) no description available & (reliability: 202.0) & (original description: Putative erf1, Description = Ethylene-responsive transcription factor 1B, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'nbv0.5scaffold9159_14776-19006' '(at5g25190 : 178.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G15360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 116.0) no description available & (reliability: 356.0) & (original description: Putative ERF003, Description = Ethylene-responsive transcription factor ERF003, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00000912ctg003_1884-4624' '(at5g47220 : 141.0) Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC boxñdependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation.; ethylene responsive element binding factor 2 (ERF2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 1 (TAIR:AT4G17500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9lw50|erf2_nicsy : 115.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 98.4) no description available & (reliability: 282.0) & (original description: Putative ERF2, Description = Ethylene-responsive transcription factor 2, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00001299ctg006_10901-14484' '(at3g04580 : 686.0) Ethylene receptor, subfamily 2. Has serine kinase activity.; ETHYLENE INSENSITIVE 4 (EIN4); FUNCTIONS IN: ethylene binding, protein histidine kinase activity, receptor activity, glycogen synthase kinase 3 activity; INVOLVED IN: negative regulation of ethylene mediated signaling pathway; LOCATED IN: endomembrane system, endoplasmic reticulum membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase, hybrid-type, ethylene sensor (TAIR:AT3G23150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35739 : 453.0) no description available & (o48929|etr1_tobac : 440.0) Ethylene receptor (EC 2.7.13.3) (NT-ETR1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|83708 : 132.0) no description available & (reliability: 1372.0) & (original description: Putative ETR6, Description = Ethylene receptor, PFAM = PF00512;PF01590;PF00072)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00002094ctg002_360-3052' '(at3g23240 : 103.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.; ethylene response factor 1 (ERF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding factor 15 (TAIR:AT2G31230.1); Has 5944 Blast hits to 5682 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5925; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 94.5) no description available & (reliability: 206.0) & (original description: Putative ERF1, Description = Ethylene response factor, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00002346ctg006_28364-30933' '(at2g31230 : 97.4) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene-responsive element binding factor 15 (ERF15); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: chloroplast; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: octadecanoid-responsive Arabidopsis AP2/ERF 59 (TAIR:AT1G06160.1); Has 7638 Blast hits to 6656 proteins in 461 species: Archae - 0; Bacteria - 190; Metazoa - 867; Fungi - 122; Plants - 5748; Viruses - 12; Other Eukaryotes - 699 (source: NCBI BLink). & (gnl|cdd|47695 : 92.6) no description available & (reliability: 194.8) & (original description: Putative erf1, Description = Ethylene-responsive transcription factor 1B, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00004141ctg001_4645-7490' '(at3g50260 : 135.0) Encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. Involved in defense and freezing stress responses. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; cooperatively regulated by ethylene and jasmonate 1 (CEJ1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: DREB and EAR motif protein 2 (TAIR:AT5G67190.1); Has 5544 Blast hits to 5466 proteins in 235 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5538; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|47695 : 94.9) no description available & (reliability: 270.0) & (original description: Putative ERF008, Description = Ethylene-responsive transcription factor ERF008, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00005599ctg021_9898-14490' '(at1g28370 : 106.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ERF domain protein 11 (ERF11); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 (TAIR:AT3G15210.1); Has 6129 Blast hits to 5763 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6120; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|47695 : 106.0) no description available & (q9lw49|erf4_nicsy : 102.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 212.0) & (original description: Putative ap2, Description = Ethylene response factor, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00007081ctg013_1170-8977' '(o48929|etr1_tobac : 1255.0) Ethylene receptor (EC 2.7.13.3) (NT-ETR1) - Nicotiana tabacum (Common tobacco) & (at1g66340 : 1135.0) Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1.; ETHYLENE RESPONSE 1 (ETR1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: ethylene response sensor 1 (TAIR:AT2G40940.1); Has 102721 Blast hits to 98263 proteins in 3046 species: Archae - 757; Bacteria - 90102; Metazoa - 18; Fungi - 1611; Plants - 2314; Viruses - 21; Other Eukaryotes - 7898 (source: NCBI BLink). & (gnl|cdd|35739 : 563.0) no description available & (gnl|cdd|83720 : 238.0) no description available & (reliability: 2270.0) & (original description: Putative ETR1, Description = Ethylene receptor 1, PFAM = PF00512;PF00072;PF01590;PF02518)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00008882ctg004_1-2023' '(at5g47230 : 137.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-5). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene responsive element binding factor 5 (ERF5); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 6 (TAIR:AT4G17490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q40478|erf5_tobac : 128.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 105.0) no description available & (reliability: 274.0) & (original description: Putative ACRE1, Description = Avr9/Cf-9 rapidly elicited protein 1, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00011199ctg001_2308-4742' '(at3g23230 : 130.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G43410.1); Has 5843 Blast hits to 5635 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5822; Viruses - 4; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|47695 : 95.3) no description available & (q9lw50|erf2_nicsy : 94.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (reliability: 260.0) & (original description: Putative erf1, Description = Ethylene-responsive transcription factor ERF098 family, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00013621ctg006_1378-4055' '(q40478|erf5_tobac : 223.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) - Nicotiana tabacum (Common tobacco) & (at5g51190 : 138.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 104 (TAIR:AT5G61600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47695 : 109.0) no description available & (reliability: 276.0) & (original description: Putative ERF5, Description = Ethylene-responsive transcription factor 5, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00020875ctg009_26232-29528' '(gnl|cdd|47695 : 93.8) no description available & (at5g13910 : 89.7) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (LEAFY PETIOLE). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. Acts as a positive regulator of gibberellic acid-induced germination.; LEAFY PETIOLE (LEP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G28160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative LEP, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00024087ctg018_1-2107' '(o48929|etr1_tobac : 483.0) Ethylene receptor (EC 2.7.13.3) (NT-ETR1) - Nicotiana tabacum (Common tobacco) & (at1g66340 : 447.0) Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1.; ETHYLENE RESPONSE 1 (ETR1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: ethylene response sensor 1 (TAIR:AT2G40940.1); Has 102721 Blast hits to 98263 proteins in 3046 species: Archae - 757; Bacteria - 90102; Metazoa - 18; Fungi - 1611; Plants - 2314; Viruses - 21; Other Eukaryotes - 7898 (source: NCBI BLink). & (gnl|cdd|35739 : 210.0) no description available & (reliability: 894.0) & (original description: Putative ETR2, Description = Ethylene receptor 2, PFAM = PF01590)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00028162ctg000_9112-11302' '(gnl|cdd|47695 : 109.0) no description available & (at4g34410 : 102.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; redox responsive transcription factor 1 (RRTF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6148 Blast hits to 5821 proteins in 258 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative AP2, Description = Ethylene-responsive transcription factor, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00028426ctg015_2376-5209' '(at5g25190 : 182.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G15360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 116.0) no description available & (reliability: 364.0) & (original description: Putative ERF003, Description = Ethylene-responsive transcription factor ERF003, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00029104ctg014_1675-4695' '(gnl|cdd|47695 : 114.0) no description available & (at4g34410 : 112.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; redox responsive transcription factor 1 (RRTF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6148 Blast hits to 5821 proteins in 258 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative WRAF2, Description = Wound-responsive AP2 like factor 2, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00032379ctg009_1245-3901' '(q9sxs8|erf3_tobac : 164.0) Ethylene-responsive transcription factor 3 (Ethylene-responsive element-binding factor 3 homolog) (EREBP-5) (NtERF5) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 106.0) no description available & (at1g50640 : 103.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-3). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ethylene responsive element binding factor 3 (ERF3); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 7 (TAIR:AT3G20310.1); Has 5989 Blast hits to 5713 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 5972; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative ERF3, Description = Ethylene-responsive transcription factor 3, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00035066ctg002_14245-16631' '(at3g23230 : 113.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G43410.1); Has 5843 Blast hits to 5635 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5822; Viruses - 4; Other Eukaryotes - 15 (source: NCBI BLink). & (q40479|erf2_tobac : 95.1) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NtERF2) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 94.5) no description available & (reliability: 226.0) & (original description: Putative ERF098, Description = Ethylene-responsive transcription factor ERF098, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00038737ctg003_842-3339' '(gnl|cdd|47695 : 97.6) no description available & (at4g23750 : 86.7) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Monopteros target gene.; cytokinin response factor 2 (CRF2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 1 (TAIR:AT4G11140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative CRF7, Description = CRF7, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00042550ctg001_6281-8946' '(at5g47220 : 135.0) Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC boxñdependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation.; ethylene responsive element binding factor 2 (ERF2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 1 (TAIR:AT4G17500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9lw50|erf2_nicsy : 121.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 98.0) no description available & (reliability: 270.0) & (original description: Putative ERF2, Description = Ethylene-responsive transcription factor 2, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00053142ctg001_7544-10330' '(at3g23240 : 174.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.; ethylene response factor 1 (ERF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding factor 15 (TAIR:AT2G31230.1); Has 5944 Blast hits to 5682 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5925; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (q9lw50|erf2_nicsy : 104.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 101.0) no description available & (reliability: 348.0) & (original description: Putative ERF1B, Description = Ethylene-responsive transcription factor 1B, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben044scf00053720ctg005_2747-5444' '(at5g25190 : 156.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G15360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 113.0) no description available & (reliability: 312.0) & (original description: Putative ERF003, Description = Ethylene-responsive transcription factor ERF003, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf00321_285919-288662' '(gnl|cdd|47695 : 114.0) no description available & (at4g34410 : 111.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; redox responsive transcription factor 1 (RRTF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6148 Blast hits to 5821 proteins in 258 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (q6k7e6|erf1_orysa : 83.6) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 222.0) & (original description: Putative ap2, Description = Ethylene-responsive transcription factor, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf00321_292785-325488' '(gnl|cdd|47695 : 111.0) no description available & (at4g34410 : 110.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; redox responsive transcription factor 1 (RRTF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6148 Blast hits to 5821 proteins in 258 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (q40477|erf4_tobac : 80.5) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NtERF3) - Nicotiana tabacum (Common tobacco) & (reliability: 220.0) & (original description: Putative ERF2, Description = ERF2 protein, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf00428_1017885-1020625' '(at5g47220 : 142.0) Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC boxñdependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation.; ethylene responsive element binding factor 2 (ERF2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 1 (TAIR:AT4G17500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9lw50|erf2_nicsy : 115.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 97.6) no description available & (reliability: 284.0) & (original description: Putative McEREBP1, Description = Ethylene-responsive element binding protein1 homolog, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf00454_253979-256584' '(at5g07580 : 125.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61590.1); Has 5961 Blast hits to 5673 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5951; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|47695 : 106.0) no description available & (q9lw48|erf5_nicsy : 101.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NsERF4) - Nicotiana sylvestris (Wood tobacco) & (reliability: 250.0) & (original description: Putative A, Description = Ethylene response factor, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf00454_265856-268461' '(at5g07580 : 142.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61590.1); Has 5961 Blast hits to 5673 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5951; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (q9lw48|erf5_nicsy : 109.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NsERF4) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 107.0) no description available & (reliability: 284.0) & (original description: Putative ERF106, Description = Ethylene-responsive transcription factor ERF106, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf00454_316925-319728' '(q40478|erf5_tobac : 185.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) - Nicotiana tabacum (Common tobacco) & (at5g51190 : 139.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 104 (TAIR:AT5G61600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47695 : 109.0) no description available & (reliability: 278.0) & (original description: Putative ERF5, Description = Ethylene-responsive transcription factor 5, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf00454_422468-425175' '(q40476|erf1_tobac : 328.0) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (NtERF1) - Nicotiana tabacum (Common tobacco) & (at4g17500 : 150.0) Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene responsive element binding factor 1 (ERF-1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 2 (TAIR:AT5G47220.1); Has 5773 Blast hits to 5650 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5761; Viruses - 2; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|47695 : 95.7) no description available & (reliability: 300.0) & (original description: Putative ERF1, Description = Ethylene-responsive transcription factor 1, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf00750_445212-449645' '(at3g04580 : 683.0) Ethylene receptor, subfamily 2. Has serine kinase activity.; ETHYLENE INSENSITIVE 4 (EIN4); FUNCTIONS IN: ethylene binding, protein histidine kinase activity, receptor activity, glycogen synthase kinase 3 activity; INVOLVED IN: negative regulation of ethylene mediated signaling pathway; LOCATED IN: endomembrane system, endoplasmic reticulum membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase, hybrid-type, ethylene sensor (TAIR:AT3G23150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35739 : 447.0) no description available & (o81122|etr1_maldo : 434.0) Ethylene receptor (EC 2.7.13.3) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|83708 : 131.0) no description available & (reliability: 1366.0) & (original description: Putative ETR2, Description = Ethylene receptor, PFAM = PF00512;PF00072;PF01590)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf00839_7641-12066' '(gnl|cdd|47695 : 106.0) no description available & (at1g28370 : 105.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ERF domain protein 11 (ERF11); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 (TAIR:AT3G15210.1); Has 6129 Blast hits to 5763 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6120; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (q9lw49|erf4_nicsy : 101.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 210.0) & (original description: Putative ap2, Description = Ethylene response factor, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf00991_1014537-1018156' '(at2g23060 : 581.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, leaf whorl, flower, pedicel, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT4G37580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1144.0) & (original description: Putative At2g23060, Description = Probable N-acetyltransferase HLS1-like, PFAM = PF00583)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01008_30825-114891' '(at1g28360 : 130.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ERF12). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ERF domain protein 12 (ERF12); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 (TAIR:AT3G15210.1); Has 5550 Blast hits to 5447 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 5541; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q40477|erf4_tobac : 104.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NtERF3) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 101.0) no description available & (reliability: 260.0) & (original description: Putative ERF5, Description = ERF5 protein, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01082_445705-448367' '(at2g44840 : 118.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene-responsive element binding factor 13 (ERF13); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 1 (TAIR:AT4G17500.1); Has 5576 Blast hits to 5517 proteins in 249 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 5557; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (q40479|erf2_tobac : 107.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NtERF2) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 104.0) no description available & (reliability: 236.0) & (original description: Putative ERF163, Description = Ethylene response factor 163, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01090_201399-204058' '(at3g23240 : 150.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.; ethylene response factor 1 (ERF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding factor 15 (TAIR:AT2G31230.1); Has 5944 Blast hits to 5682 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5925; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 98.8) no description available & (q9lw48|erf5_nicsy : 87.8) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NsERF4) - Nicotiana sylvestris (Wood tobacco) & (reliability: 300.0) & (original description: Putative erf1, Description = Ethylene response factor 1, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01094_334433-336984' '(at3g23240 : 106.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.; ethylene response factor 1 (ERF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding factor 15 (TAIR:AT2G31230.1); Has 5944 Blast hits to 5682 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5925; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 102.0) no description available & (q40479|erf2_tobac : 93.2) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NtERF2) - Nicotiana tabacum (Common tobacco) & (reliability: 212.0) & (original description: Putative PTI5, Description = Pathogenesis-related genes transcriptional activator PTI5, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01094_338225-341046' '(gnl|cdd|47695 : 100.0) no description available & (at5g51190 : 90.1) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 104 (TAIR:AT5G61600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q40478|erf5_tobac : 83.2) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) - Nicotiana tabacum (Common tobacco) & (reliability: 180.2) & (original description: Putative ERF16, Description = Transcription factor ERF16, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01142_473759-476387' '(at5g25190 : 163.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G15360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 113.0) no description available & (reliability: 326.0) & (original description: Putative ERF003, Description = Ethylene-responsive transcription factor ERF003, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01159_12240-14911' '(at2g44840 : 139.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene-responsive element binding factor 13 (ERF13); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 1 (TAIR:AT4G17500.1); Has 5576 Blast hits to 5517 proteins in 249 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 5557; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (q9lw50|erf2_nicsy : 124.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 100.0) no description available & (reliability: 278.0) & (original description: Putative DORA, Description = AP2-domain DNA-binding protein, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01212_428371-431195' '(gnl|cdd|47695 : 100.0) no description available & (at4g18450 : 94.4) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 1 (TAIR:AT3G23240.1); Has 5532 Blast hits to 5448 proteins in 244 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5521; Viruses - 2; Other Eukaryotes - 9 (source: NCBI BLink). & (q40476|erf1_tobac : 83.6) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (NtERF1) - Nicotiana tabacum (Common tobacco) & (reliability: 188.8) & (original description: Putative A, Description = Ethylene response factor, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01350_703833-706657' '(gnl|cdd|47695 : 117.0) no description available & (at4g34410 : 100.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; redox responsive transcription factor 1 (RRTF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6148 Blast hits to 5821 proteins in 258 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative ERF2, Description = ERF2 protein, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01426_80841-83521' '(q9lw49|erf4_nicsy : 343.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 112.0) no description available & (at5g44210 : 98.6) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; erf domain protein 9 (ERF9); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ERF domain protein 10 (TAIR:AT1G03800.1); Has 6203 Blast hits to 5781 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6179; Viruses - 2; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 197.2) & (original description: Putative ERF4, Description = Ethylene-responsive transcription factor 4, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01428_462472-464915' '(at3g23230 : 112.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G43410.1); Has 5843 Blast hits to 5635 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5822; Viruses - 4; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|47695 : 96.5) no description available & (q9lw50|erf2_nicsy : 95.1) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (reliability: 224.0) & (original description: Putative ERF098, Description = Ethylene-responsive transcription factor ERF098, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01428_462541-464927' '(at3g23230 : 111.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G43410.1); Has 5843 Blast hits to 5635 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5822; Viruses - 4; Other Eukaryotes - 15 (source: NCBI BLink). & (q40479|erf2_tobac : 95.5) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NtERF2) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 95.3) no description available & (reliability: 222.0) & (original description: Putative ERF098, Description = Ethylene-responsive transcription factor ERF098, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01430_217987-224101' '(o81122|etr1_maldo : 833.0) Ethylene receptor (EC 2.7.13.3) - Malus domestica (Apple) (Malus sylvestris) & (at2g40940 : 813.0) Ethylene receptor, subfamily 1. Has histidine kinase activity.; ethylene response sensor 1 (ERS1); FUNCTIONS IN: ethylene binding, protein histidine kinase activity, receptor activity; INVOLVED IN: negative regulation of ethylene mediated signaling pathway; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase, hybrid-type, ethylene sensor (TAIR:AT1G66340.1); Has 78353 Blast hits to 77870 proteins in 2969 species: Archae - 539; Bacteria - 69363; Metazoa - 12; Fungi - 1128; Plants - 1692; Viruses - 20; Other Eukaryotes - 5599 (source: NCBI BLink). & (gnl|cdd|35739 : 399.0) no description available & (gnl|cdd|83720 : 210.0) no description available & (reliability: 1626.0) & (original description: Putative ers, Description = Ethylene response sensor, PFAM = PF01590;PF00512;PF02518)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01795_213729-220809' '(at3g04580 : 830.0) Ethylene receptor, subfamily 2. Has serine kinase activity.; ETHYLENE INSENSITIVE 4 (EIN4); FUNCTIONS IN: ethylene binding, protein histidine kinase activity, receptor activity, glycogen synthase kinase 3 activity; INVOLVED IN: negative regulation of ethylene mediated signaling pathway; LOCATED IN: endomembrane system, endoplasmic reticulum membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase, hybrid-type, ethylene sensor (TAIR:AT3G23150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35739 : 497.0) no description available & (o81122|etr1_maldo : 441.0) Ethylene receptor (EC 2.7.13.3) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|83708 : 133.0) no description available & (reliability: 1660.0) & (original description: Putative ein1, Description = Ethylene receptor, PFAM = PF02518;PF01590;PF00072)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01795_640728-643300' '(at3g23240 : 128.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.; ethylene response factor 1 (ERF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding factor 15 (TAIR:AT2G31230.1); Has 5944 Blast hits to 5682 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5925; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 107.0) no description available & (q9lw48|erf5_nicsy : 81.6) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NsERF4) - Nicotiana sylvestris (Wood tobacco) & (reliability: 256.0) & (original description: Putative ERF3, Description = AP2-ERF transcription factor, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01818_782696-786107' '(at1g28160 : 109.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5516 Blast hits to 5465 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 5459; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|47695 : 87.2) no description available & (reliability: 218.0) & (original description: Putative bd1, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01818_801154-804630' '(gnl|cdd|47695 : 94.2) no description available & (at1g28160 : 94.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5516 Blast hits to 5465 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 5459; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative bd1, Description = AP2 domain class transcription factor, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01947_199873-202547' '(at3g23240 : 104.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.; ethylene response factor 1 (ERF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding factor 15 (TAIR:AT2G31230.1); Has 5944 Blast hits to 5682 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5925; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 93.4) no description available & (reliability: 208.0) & (original description: Putative ERF1, Description = Ethylene response factor, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf01956_1182170-1204413' '(at3g23240 : 165.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.; ethylene response factor 1 (ERF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding factor 15 (TAIR:AT2G31230.1); Has 5944 Blast hits to 5682 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5925; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 96.5) no description available & (q9lw50|erf2_nicsy : 87.4) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (reliability: 330.0) & (original description: Putative erf1, Description = Ethylene response factor 1, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf02282_114748-118858' '(at4g37580 : 555.0) involved in apical hook development. putative N-acetyltransferase; HOOKLESS 1 (HLS1); CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G23060.1); Has 145 Blast hits to 145 proteins in 38 species: Archae - 22; Bacteria - 20; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 1110.0) & (original description: Putative At2g23060, Description = Probable N-acetyltransferase HLS1-like, PFAM = PF00583)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf02408_67920-70774' '(gnl|cdd|47695 : 113.0) no description available & (at4g34410 : 104.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; redox responsive transcription factor 1 (RRTF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6148 Blast hits to 5821 proteins in 258 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative ERF2, Description = ERF2 protein, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf02775_82475-85209' '(at4g17500 : 147.0) Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene responsive element binding factor 1 (ERF-1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 2 (TAIR:AT5G47220.1); Has 5773 Blast hits to 5650 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5761; Viruses - 2; Other Eukaryotes - 10 (source: NCBI BLink). & (q9lw50|erf2_nicsy : 123.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 102.0) no description available & (reliability: 294.0) & (original description: Putative BnaC07g20040D, Description = BnaC07g20040D protein, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf02775_106041-108833' '(at4g17500 : 150.0) Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene responsive element binding factor 1 (ERF-1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 2 (TAIR:AT5G47220.1); Has 5773 Blast hits to 5650 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5761; Viruses - 2; Other Eukaryotes - 10 (source: NCBI BLink). & (q9lw50|erf2_nicsy : 115.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 100.0) no description available & (reliability: 300.0) & (original description: Putative McEREBP1, Description = Ethylene-responsive element binding protein1 homolog, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf02775_160294-162959' '(at5g47220 : 134.0) Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC boxñdependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation.; ethylene responsive element binding factor 2 (ERF2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 1 (TAIR:AT4G17500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9lw50|erf2_nicsy : 120.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 98.4) no description available & (reliability: 268.0) & (original description: Putative ERF2, Description = Ethylene-responsive transcription factor 2, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf02913_92841-103220' '(gnl|cdd|66792 : 303.0) no description available & (at3g50150 : 176.0) Plant protein of unknown function (DUF247); INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50170.1); Has 1158 Blast hits to 1035 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1158; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative PGSC0003DMG400006524, Description = Putative UPF0481 protein, PFAM = PF03140)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf03035_149882-152562' '(q9lw49|erf4_nicsy : 356.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 109.0) no description available & (at5g44210 : 96.7) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; erf domain protein 9 (ERF9); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ERF domain protein 10 (TAIR:AT1G03800.1); Has 6203 Blast hits to 5781 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6179; Viruses - 2; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative ERF4, Description = Ethylene-responsive transcription factor 4, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf03223_25314-27730' '(at1g46768 : 124.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.1). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.9 and RAP2.10.; related to AP2 1 (RAP2.1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 10 (TAIR:AT4G36900.1); Has 5681 Blast hits to 5559 proteins in 243 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5675; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|47695 : 91.5) no description available & (reliability: 244.0) & (original description: Putative CEJ1, Description = Dehydration responsive element binding protein, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf03314_67689-70153' '(at5g67190 : 153.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; DREB and EAR motif protein 2 (DEAR2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cooperatively regulated by ethylene and jasmonate 1 (TAIR:AT3G50260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 98.8) no description available & (reliability: 304.0) & (original description: Putative ERF011, Description = Ethylene-responsive transcription factor ERF011, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf03940_457091-461524' '(at3g23150 : 696.0) Involved in ethylene perception in Arabidopsis; ethylene response 2 (ETR2); FUNCTIONS IN: ethylene binding, protein histidine kinase activity, receptor activity, glycogen synthase kinase 3 activity; INVOLVED IN: negative regulation of ethylene mediated signaling pathway; LOCATED IN: endomembrane system, endoplasmic reticulum membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase, hybrid-type, ethylene sensor (TAIR:AT3G04580.2); Has 29902 Blast hits to 25922 proteins in 2098 species: Archae - 92; Bacteria - 25510; Metazoa - 11; Fungi - 1191; Plants - 1553; Viruses - 6; Other Eukaryotes - 1539 (source: NCBI BLink). & (gnl|cdd|35739 : 461.0) no description available & (o81122|etr1_maldo : 421.0) Ethylene receptor (EC 2.7.13.3) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|83708 : 128.0) no description available & (reliability: 1392.0) & (original description: Putative ein1, Description = Ethylene receptor, PFAM = PF00072;PF01590;PF00512)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf04316_905646-917270' '(o48929|etr1_tobac : 1360.0) Ethylene receptor (EC 2.7.13.3) (NT-ETR1) - Nicotiana tabacum (Common tobacco) & (at1g66340 : 1160.0) Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1.; ETHYLENE RESPONSE 1 (ETR1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: ethylene response sensor 1 (TAIR:AT2G40940.1); Has 102721 Blast hits to 98263 proteins in 3046 species: Archae - 757; Bacteria - 90102; Metazoa - 18; Fungi - 1611; Plants - 2314; Viruses - 21; Other Eukaryotes - 7898 (source: NCBI BLink). & (gnl|cdd|35739 : 565.0) no description available & (gnl|cdd|83720 : 233.0) no description available & (reliability: 2320.0) & (original description: Putative ETR1, Description = Ethylene receptor, PFAM = PF00512;PF00072;PF02518;PF01590)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf04826_193905-196435' '(at3g50260 : 139.0) Encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. Involved in defense and freezing stress responses. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; cooperatively regulated by ethylene and jasmonate 1 (CEJ1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: DREB and EAR motif protein 2 (TAIR:AT5G67190.1); Has 5544 Blast hits to 5466 proteins in 235 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5538; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|47695 : 98.8) no description available & (reliability: 278.0) & (original description: Putative DREB5A, Description = Dehydration responsive element binding transcription factor, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf05135_628878-631393' '(at2g23340 : 139.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; DREB and EAR motif protein 3 (DEAR3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 10 (TAIR:AT4G36900.1); Has 5516 Blast hits to 5457 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5509; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|47695 : 95.3) no description available & (reliability: 270.0) & (original description: Putative ERF008, Description = Ethylene-responsive transcription factor ERF008, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf05173_579666-582283' '(at2g44840 : 132.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene-responsive element binding factor 13 (ERF13); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 1 (TAIR:AT4G17500.1); Has 5576 Blast hits to 5517 proteins in 249 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 5557; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (q40479|erf2_tobac : 129.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NtERF2) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 100.0) no description available & (reliability: 264.0) & (original description: Putative DORA, Description = AP2-domain DNA-binding protein, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf05173_588084-590641' '(at2g44840 : 124.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene-responsive element binding factor 13 (ERF13); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 1 (TAIR:AT4G17500.1); Has 5576 Blast hits to 5517 proteins in 249 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 5557; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (q40476|erf1_tobac : 114.0) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (NtERF1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 102.0) no description available & (reliability: 248.0) & (original description: Putative ERF, Description = Ethylene-responsive transcription factor, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf05173_853823-856491' '(gnl|cdd|47695 : 93.4) no description available & (at2g44840 : 90.9) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene-responsive element binding factor 13 (ERF13); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 1 (TAIR:AT4G17500.1); Has 5576 Blast hits to 5517 proteins in 249 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 5557; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (q40479|erf2_tobac : 87.4) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NtERF2) - Nicotiana tabacum (Common tobacco) & (reliability: 181.8) & (original description: Putative ERF115, Description = Ethylene response factor 115, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf05480_14236-16727' '(at1g28360 : 112.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ERF12). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ERF domain protein 12 (ERF12); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 (TAIR:AT3G15210.1); Has 5550 Blast hits to 5447 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 5541; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|47695 : 100.0) no description available & (q9lw49|erf4_nicsy : 97.4) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 224.0) & (original description: Putative ERF12, Description = Ethylene-responsive transcription factor 12, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf06200_124514-127182' '(q40477|erf4_tobac : 108.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NtERF3) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 103.0) no description available & (at5g44210 : 100.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; erf domain protein 9 (ERF9); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ERF domain protein 10 (TAIR:AT1G03800.1); Has 6203 Blast hits to 5781 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6179; Viruses - 2; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative ERF3, Description = Ethylene response factor 3, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf06203_628423-633786' '(gnl|cdd|47695 : 111.0) no description available & (at4g34410 : 105.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; redox responsive transcription factor 1 (RRTF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6148 Blast hits to 5821 proteins in 258 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative WRAF2, Description = Wound-responsive AP2 like factor 2, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf06413_130707-133213' '(at2g31230 : 127.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene-responsive element binding factor 15 (ERF15); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: chloroplast; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: octadecanoid-responsive Arabidopsis AP2/ERF 59 (TAIR:AT1G06160.1); Has 7638 Blast hits to 6656 proteins in 461 species: Archae - 0; Bacteria - 190; Metazoa - 867; Fungi - 122; Plants - 5748; Viruses - 12; Other Eukaryotes - 699 (source: NCBI BLink). & (gnl|cdd|47695 : 102.0) no description available & (q40479|erf2_tobac : 100.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NtERF2) - Nicotiana tabacum (Common tobacco) & (reliability: 254.0) & (original description: Putative ERF3, Description = AP2-ERF transcription factor, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf06444_212633-215100' '(at5g67190 : 150.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; DREB and EAR motif protein 2 (DEAR2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cooperatively regulated by ethylene and jasmonate 1 (TAIR:AT3G50260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 98.8) no description available & (reliability: 292.0) & (original description: Putative CEJ1, Description = RAP2-like protein, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf06976_685454-689542' '(at4g37580 : 375.0) involved in apical hook development. putative N-acetyltransferase; HOOKLESS 1 (HLS1); CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G23060.1); Has 145 Blast hits to 145 proteins in 38 species: Archae - 22; Bacteria - 20; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 750.0) & (original description: Putative HLS1, Description = Probable N-acetyltransferase HLS1, PFAM = PF00583)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf07172_13933-16784' '(gnl|cdd|47695 : 116.0) no description available & (at4g34410 : 114.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; redox responsive transcription factor 1 (RRTF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6148 Blast hits to 5821 proteins in 258 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (q6k7e6|erf1_orysa : 82.8) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 228.0) & (original description: Putative ERF2, Description = ERF2 protein, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf07310_218787-221455' '(q9sxs8|erf3_tobac : 218.0) Ethylene-responsive transcription factor 3 (Ethylene-responsive element-binding factor 3 homolog) (EREBP-5) (NtERF5) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 105.0) no description available & (at1g50640 : 85.5) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-3). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ethylene responsive element binding factor 3 (ERF3); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 7 (TAIR:AT3G20310.1); Has 5989 Blast hits to 5713 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 5972; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative ERF3, Description = Ethylene-responsive transcription factor 3, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf07761_25253-27633' '(gnl|cdd|47695 : 93.4) no description available & (at3g23220 : 85.9) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G23230.1); Has 5797 Blast hits to 5590 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5785; Viruses - 2; Other Eukaryotes - 10 (source: NCBI BLink). & (q9lw50|erf2_nicsy : 80.1) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (reliability: 171.8) & (original description: Putative ERF, Description = Ethylene-responsive transcription factor ERF098 family, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf07761_69113-71583' '(gnl|cdd|47695 : 100.0) no description available & (at3g23230 : 94.4) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G43410.1); Has 5843 Blast hits to 5635 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5822; Viruses - 4; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative ERF096, Description = Ethylene-responsive transcription factor ERF096, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf07761_271254-273982' '(at3g23240 : 171.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.; ethylene response factor 1 (ERF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding factor 15 (TAIR:AT2G31230.1); Has 5944 Blast hits to 5682 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5925; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 102.0) no description available & (q9lw50|erf2_nicsy : 100.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (reliability: 342.0) & (original description: Putative ERF1B, Description = Ethylene-responsive transcription factor 1B, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf07913_128929-133637' '(at5g25390 : 176.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; shine2 (SHN2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G11190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 113.0) no description available & (reliability: 348.0) & (original description: Putative AP2D35, Description = AP2 domain class transcription factor, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf07926_688320-691035' '(at5g25190 : 151.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G15360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 111.0) no description available & (reliability: 302.0) & (original description: Putative ERF003, Description = Ethylene-responsive transcription factor ERF003, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf08546_175-2873' '(q40479|erf2_tobac : 315.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NtERF2) - Nicotiana tabacum (Common tobacco) & (at4g17500 : 155.0) Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene responsive element binding factor 1 (ERF-1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 2 (TAIR:AT5G47220.1); Has 5773 Blast hits to 5650 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5761; Viruses - 2; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|47695 : 101.0) no description available & (reliability: 310.0) & (original description: Putative ERF2, Description = Ethylene-responsive transcription factor 2, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf08546_318513-555449' '(q40478|erf5_tobac : 416.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) - Nicotiana tabacum (Common tobacco) & (at5g51190 : 176.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 104 (TAIR:AT5G61600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47695 : 110.0) no description available & (reliability: 352.0) & (original description: Putative ERF5, Description = Ethylene-responsive transcription factor 5, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf08546_600171-602788' '(at5g07580 : 145.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61590.1); Has 5961 Blast hits to 5673 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5951; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (q40478|erf5_tobac : 119.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 102.0) no description available & (reliability: 290.0) & (original description: Putative ERF106, Description = Ethylene-responsive transcription factor ERF106, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf08546_600189-602767' '(at5g07580 : 143.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61590.1); Has 5961 Blast hits to 5673 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5951; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (q40478|erf5_tobac : 115.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 100.0) no description available & (reliability: 286.0) & (original description: Putative A, Description = Ethylene response factor, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf08758_218895-222233' '(at2g30090 : 363.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, sepal, male gametophyte; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT4G37580.1); Has 320 Blast hits to 320 proteins in 91 species: Archae - 28; Bacteria - 42; Metazoa - 134; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 678.0) & (original description: Putative BnaC04g14700D, Description = BnaC04g14700D protein, PFAM = PF00583)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf08965_18704-21273' '(at2g31230 : 101.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene-responsive element binding factor 15 (ERF15); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: chloroplast; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: octadecanoid-responsive Arabidopsis AP2/ERF 59 (TAIR:AT1G06160.1); Has 7638 Blast hits to 6656 proteins in 461 species: Archae - 0; Bacteria - 190; Metazoa - 867; Fungi - 122; Plants - 5748; Viruses - 12; Other Eukaryotes - 699 (source: NCBI BLink). & (gnl|cdd|47695 : 94.9) no description available & (reliability: 202.0) & (original description: Putative erf1, Description = Ethylene-responsive transcription factor 1B, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf09191_20464-23282' '(q9lw49|erf4_nicsy : 129.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 113.0) no description available & (at5g44210 : 92.4) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; erf domain protein 9 (ERF9); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ERF domain protein 10 (TAIR:AT1G03800.1); Has 6203 Blast hits to 5781 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6179; Viruses - 2; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative BnaA10g02160D, Description = BnaA10g02160D protein, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf09236_43292-45948' '(q9sxs8|erf3_tobac : 164.0) Ethylene-responsive transcription factor 3 (Ethylene-responsive element-binding factor 3 homolog) (EREBP-5) (NtERF5) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 106.0) no description available & (at1g50640 : 103.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-3). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ethylene responsive element binding factor 3 (ERF3); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 7 (TAIR:AT3G20310.1); Has 5989 Blast hits to 5713 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 5972; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative ERF3, Description = Ethylene-responsive transcription factor 3, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf09550_127288-159799' '(at3g23150 : 773.0) Involved in ethylene perception in Arabidopsis; ethylene response 2 (ETR2); FUNCTIONS IN: ethylene binding, protein histidine kinase activity, receptor activity, glycogen synthase kinase 3 activity; INVOLVED IN: negative regulation of ethylene mediated signaling pathway; LOCATED IN: endomembrane system, endoplasmic reticulum membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase, hybrid-type, ethylene sensor (TAIR:AT3G04580.2); Has 29902 Blast hits to 25922 proteins in 2098 species: Archae - 92; Bacteria - 25510; Metazoa - 11; Fungi - 1191; Plants - 1553; Viruses - 6; Other Eukaryotes - 1539 (source: NCBI BLink). & (gnl|cdd|35739 : 505.0) no description available & (o49230|etr1_braol : 451.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (gnl|cdd|83708 : 132.0) no description available & (reliability: 1546.0) & (original description: Putative ein1, Description = Ethylene receptor, PFAM = PF00072;PF02518;PF00512;PF01590)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf09704_261959-293616' '(gnl|cdd|47695 : 112.0) no description available & (q9lw49|erf4_nicsy : 98.2) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (at5g44210 : 96.3) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; erf domain protein 9 (ERF9); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ERF domain protein 10 (TAIR:AT1G03800.1); Has 6203 Blast hits to 5781 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6179; Viruses - 2; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative ERF3, Description = Ethylene response factor 3, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf09854_32899-38064' '(at3g04580 : 823.0) Ethylene receptor, subfamily 2. Has serine kinase activity.; ETHYLENE INSENSITIVE 4 (EIN4); FUNCTIONS IN: ethylene binding, protein histidine kinase activity, receptor activity, glycogen synthase kinase 3 activity; INVOLVED IN: negative regulation of ethylene mediated signaling pathway; LOCATED IN: endomembrane system, endoplasmic reticulum membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase, hybrid-type, ethylene sensor (TAIR:AT3G23150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35739 : 450.0) no description available & (o81122|etr1_maldo : 439.0) Ethylene receptor (EC 2.7.13.3) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|83708 : 104.0) no description available & (reliability: 1646.0) & (original description: Putative ETR5, Description = Ethylene receptor homolog, PFAM = PF01590;PF00072)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf09882_162907-165703' '(at1g15360 : 181.0) Encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. This gene is involved in wax biosynthesis. Over-expression of the gene results in glossy leaf phenotype and increased drought tolerance. Two closely related genes, AT5G25390 and AT5G11190 have similar phenotypes when over-expressed. Strong expression levels in flowers. Binds to the promoter of LACS2.; SHINE 1 (SHN1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25390.2); Has 5918 Blast hits to 5765 proteins in 265 species: Archae - 0; Bacteria - 6; Metazoa - 9; Fungi - 23; Plants - 5843; Viruses - 2; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|47695 : 109.0) no description available & (reliability: 362.0) & (original description: Putative WIN1, Description = Ethylene-responsive transcription factor WIN1, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf10785_203647-207151' '(gnl|cdd|47695 : 94.9) no description available & (at1g28160 : 93.2) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5516 Blast hits to 5465 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 5459; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative LEP, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf11424_103679-106548' '(q9lw49|erf4_nicsy : 186.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47695 : 112.0) no description available & (at5g44210 : 98.2) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; erf domain protein 9 (ERF9); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ERF domain protein 10 (TAIR:AT1G03800.1); Has 6203 Blast hits to 5781 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6179; Viruses - 2; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative ERF4, Description = Ethylene-responsive transcription factor 4, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf11767_297690-313834' '(o48929|etr1_tobac : 1061.0) Ethylene receptor (EC 2.7.13.3) (NT-ETR1) - Nicotiana tabacum (Common tobacco) & (at1g66340 : 948.0) Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1.; ETHYLENE RESPONSE 1 (ETR1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: ethylene response sensor 1 (TAIR:AT2G40940.1); Has 102721 Blast hits to 98263 proteins in 3046 species: Archae - 757; Bacteria - 90102; Metazoa - 18; Fungi - 1611; Plants - 2314; Viruses - 21; Other Eukaryotes - 7898 (source: NCBI BLink). & (gnl|cdd|35739 : 461.0) no description available & (gnl|cdd|83708 : 153.0) no description available & (reliability: 1896.0) & (original description: Putative ETR1, Description = Ethylene receptor 1, PFAM = PF02518;PF01590;PF00072)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf11953_225325-232661' '(at3g04580 : 819.0) Ethylene receptor, subfamily 2. Has serine kinase activity.; ETHYLENE INSENSITIVE 4 (EIN4); FUNCTIONS IN: ethylene binding, protein histidine kinase activity, receptor activity, glycogen synthase kinase 3 activity; INVOLVED IN: negative regulation of ethylene mediated signaling pathway; LOCATED IN: endomembrane system, endoplasmic reticulum membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase, hybrid-type, ethylene sensor (TAIR:AT3G23150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35739 : 450.0) no description available & (o81122|etr1_maldo : 441.0) Ethylene receptor (EC 2.7.13.3) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|83708 : 110.0) no description available & (reliability: 1638.0) & (original description: Putative EIN4, Description = Protein EIN4, PFAM = PF00072;PF01590)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf12210_659864-662667' '(q40478|erf5_tobac : 211.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) - Nicotiana tabacum (Common tobacco) & (at5g51190 : 138.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 104 (TAIR:AT5G61600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47695 : 109.0) no description available & (reliability: 276.0) & (original description: Putative ERF3, Description = Ethylene response factor ERF3, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf12210_834945-837526' '(gnl|cdd|47695 : 116.0) no description available & (at5g50080 : 95.1) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; ethylene response factor 110 (ERF110); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G33710.1); Has 6196 Blast hits to 5849 proteins in 257 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6176; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative ap2, Description = Ethylene response factor, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf13455_236295-238858' '(at3g23240 : 132.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.; ethylene response factor 1 (ERF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding factor 15 (TAIR:AT2G31230.1); Has 5944 Blast hits to 5682 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5925; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 89.5) no description available & (q40479|erf2_tobac : 89.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NtERF2) - Nicotiana tabacum (Common tobacco) & (reliability: 264.0) & (original description: Putative erf1, Description = Ethylene-responsive transcription factor 1B, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf13779_18435-21127' '(gnl|cdd|47695 : 110.0) no description available & (at3g15210 : 99.8) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-4). The protein contains one AP2 domain. Acts as a negative regulator of JA-responsive defense gene expression and resistance to the necrotrophic fungal pathogen Fusarium oxysporum and antagonizes JA inhibition of root elongation.; ethylene responsive element binding factor 4 (ERF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 8 (TAIR:AT1G53170.1); Has 6170 Blast hits to 5786 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6156; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (q9lw49|erf4_nicsy : 97.4) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 199.6) & (original description: Putative ERF3, Description = Ethylene response factor 3, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf15451_5793-17249' '(at3g23240 : 118.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.; ethylene response factor 1 (ERF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding factor 15 (TAIR:AT2G31230.1); Has 5944 Blast hits to 5682 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5925; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 96.5) no description available & (reliability: 236.0) & (original description: Putative erf1, Description = Ethylene-responsive transcription factor 1B, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf19091_9322-60252' '(gnl|cdd|28902 : 95.7) no description available & (at1g24590 : 95.5) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. This gene functions in the regeneration of shoots in tissue culture, probably through transcriptional regulation of CUC1. May also be involved in activation of the cell cycle via CycD1;1.; DORNROSCHEN-like (DRNL); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: embryo, leaf primordium, seed; EXPRESSED DURING: C globular stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G12980.1); Has 5552 Blast hits to 5472 proteins in 243 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5544; Viruses - 2; Other Eukaryotes - 6 (source: NCBI BLink). & (q9lw49|erf4_nicsy : 85.5) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 190.2) & (original description: Putative bd1, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf20727_1-3401' '(at2g23060 : 575.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, leaf whorl, flower, pedicel, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT4G37580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1140.0) & (original description: Putative At2g23060, Description = Probable N-acetyltransferase HLS1-like, PFAM = PF00583)' T '17.5.2' 'hormone metabolism.ethylene.signal transduction' 'niben101scf23241_6948-9889' '(at5g47230 : 144.0) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-5). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene responsive element binding factor 5 (ERF5); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 6 (TAIR:AT4G17490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q40478|erf5_tobac : 132.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 107.0) no description available & (reliability: 288.0) & (original description: Putative ACRE1, Description = Avr9/Cf-9 rapidly elicited protein 1, PFAM = PF00847)' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.3scaffold2273_28873-35419' '(at2g23610 : 229.0) Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on methyl salicylate, MeGA4, or MEGA9 in vitro.; methyl esterase 3 (MES3); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 4 (TAIR:AT2G23580.1); Has 1894 Blast hits to 1892 proteins in 428 species: Archae - 2; Bacteria - 1086; Metazoa - 0; Fungi - 17; Plants - 628; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (q40708|pir7a_orysa : 227.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 416.0) & (original description: Putative SABP2, Description = Salicylic acid-binding protein 2, PFAM = PF12697)' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.3scaffold4869_45905-48295' '(gnl|cdd|28928 : 108.0) no description available & (gnl|cdd|35555 : 105.0) no description available & (at2g47330 : 92.4) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G20920.1); Has 46798 Blast hits to 46047 proteins in 3085 species: Archae - 817; Bacteria - 24489; Metazoa - 6167; Fungi - 4661; Plants - 2616; Viruses - 11; Other Eukaryotes - 8037 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative mahe, Description = ATP-dependent RNA helicase p62, PFAM = PF00270)' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.3scaffold10462_64133-68733' '(at1g61660 : 139.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G20640.1). & (reliability: 270.0) & (original description: Putative ACT1, Description = Ethylene-responsive family protein, PFAM = )' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.3scaffold14754_1-7389' '(at5g63120 : 681.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G55150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35552 : 583.0) no description available & (p46942|db10_nicsy : 418.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|30859 : 399.0) no description available & (reliability: 1256.0) & (original description: Putative RH20, Description = DEAD-box ATP-dependent RNA helicase 20, PFAM = PF00270;PF00271)' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.3scaffold45678_5162-8079' '(at3g16050 : 437.0) Encodes a protein with pyridoxal phosphate synthase activity whose transcripts were detected mostly in roots and accumulate during senescence. The protein was found in very low abundance, which prevented a specific localisation.; pyridoxine biosynthesis 1.2 (PDX1.2); FUNCTIONS IN: protein heterodimerization activity; INVOLVED IN: pyridoxal phosphate biosynthetic process, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Vitamin B6 biosynthesis protein (InterPro:IPR001852), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT5G01410.1); Has 3117 Blast hits to 3111 proteins in 1095 species: Archae - 240; Bacteria - 1784; Metazoa - 13; Fungi - 157; Plants - 173; Viruses - 0; Other Eukaryotes - 750 (source: NCBI BLink). & (gnl|cdd|36819 : 419.0) no description available & (q39963|pdx1_hevbr : 405.0) Probable pyridoxin biosynthesis protein ER1 (PDX1 homolog) (Ethylene-inducible protein HEVER) - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|73389 : 377.0) no description available & (reliability: 874.0) & (original description: Putative PDX12, Description = Pyridoxal 5'-phosphate synthase-like subunit PDX1.2, PFAM = PF01680)' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.3scaffold46589_10570-16027' '(at3g20640 : 191.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G61660.1); Has 3293 Blast hits to 1784 proteins in 150 species: Archae - 0; Bacteria - 39; Metazoa - 261; Fungi - 101; Plants - 1460; Viruses - 0; Other Eukaryotes - 1432 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative Os04g0493100, Description = OJ990528_30.9 protein, PFAM = )' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.3scaffold55257_4509-10426' '(at3g20640 : 192.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G61660.1); Has 3293 Blast hits to 1784 proteins in 150 species: Archae - 0; Bacteria - 39; Metazoa - 261; Fungi - 101; Plants - 1460; Viruses - 0; Other Eukaryotes - 1432 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative ACT1, Description = Ethylene-responsive family protein, PFAM = )' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.5scaffold1156_44662-50242' '(at1g09740 : 227.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G11930.1); Has 5950 Blast hits to 5719 proteins in 1218 species: Archae - 487; Bacteria - 4382; Metazoa - 139; Fungi - 81; Plants - 701; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|30165 : 97.5) no description available & (reliability: 454.0) & (original description: Putative BnaC08g13820D, Description = BnaC08g13820D protein, PFAM = PF00582)' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.5scaffold1249_101241-106698' '(at3g58680 : 143.0) One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is developmentally regulated.; multiprotein bridging factor 1B (MBF1B); CONTAINS InterPro DOMAIN/s: Lambda repressor-like, DNA-binding (InterPro:IPR010982), Multiprotein bridging factor 1, N-terminal (InterPro:IPR013729), Helix-turn-helix type 3 (InterPro:IPR001387); BEST Arabidopsis thaliana protein match is: multiprotein bridging factor 1A (TAIR:AT2G42680.1); Has 690 Blast hits to 690 proteins in 262 species: Archae - 53; Bacteria - 10; Metazoa - 194; Fungi - 151; Plants - 135; Viruses - 2; Other Eukaryotes - 145 (source: NCBI BLink). & (gnl|cdd|38608 : 114.0) no description available & (reliability: 286.0) & (original description: Putative MBF1B, Description = Multiprotein-bridging factor 1b, PFAM = PF08523)' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.5scaffold3073_103282-118578' '(gnl|cdd|35552 : 355.0) no description available & (gnl|cdd|30859 : 342.0) no description available & (at1g55150 : 273.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 234.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 546.0) & (original description: Putative P68, Description = DEAD box protein P68, PFAM = PF00271;PF00270)' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.5scaffold3471_70376-76009' '(at4g29100 : 114.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G20100.1); Has 1864 Blast hits to 1723 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 76; Fungi - 29; Plants - 923; Viruses - 0; Other Eukaryotes - 836 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative B70, Description = Ethylene-responsive family protein, PFAM = )' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.5scaffold3538_138424-247271' '(at3g11930 : 112.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G58450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative BnaA03g32010D, Description = Adenine nucleotide alpha hydrolases-like superfamily protein, putative, PFAM = PF00582)' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.5scaffold3790_39823-42712' '(at2g23610 : 221.0) Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on methyl salicylate, MeGA4, or MEGA9 in vitro.; methyl esterase 3 (MES3); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 4 (TAIR:AT2G23580.1); Has 1894 Blast hits to 1892 proteins in 428 species: Archae - 2; Bacteria - 1086; Metazoa - 0; Fungi - 17; Plants - 628; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (q40708|pir7a_orysa : 196.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 402.0) & (original description: Putative SABP2, Description = Salicylic acid-binding protein 2, PFAM = PF12697)' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'nbv0.5scaffold10905_723-3113' '(gnl|cdd|28928 : 107.0) no description available & (gnl|cdd|35555 : 105.0) no description available & (at2g47330 : 94.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G20920.1); Has 46798 Blast hits to 46047 proteins in 3085 species: Archae - 817; Bacteria - 24489; Metazoa - 6167; Fungi - 4661; Plants - 2616; Viruses - 11; Other Eukaryotes - 8037 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative p62, Description = ATP-dependent RNA helicase p62, PFAM = PF00270)' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben044scf00003345ctg017_1-3816' '(at3g58680 : 175.0) One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is developmentally regulated.; multiprotein bridging factor 1B (MBF1B); CONTAINS InterPro DOMAIN/s: Lambda repressor-like, DNA-binding (InterPro:IPR010982), Multiprotein bridging factor 1, N-terminal (InterPro:IPR013729), Helix-turn-helix type 3 (InterPro:IPR001387); BEST Arabidopsis thaliana protein match is: multiprotein bridging factor 1A (TAIR:AT2G42680.1); Has 690 Blast hits to 690 proteins in 262 species: Archae - 53; Bacteria - 10; Metazoa - 194; Fungi - 151; Plants - 135; Viruses - 2; Other Eukaryotes - 145 (source: NCBI BLink). & (gnl|cdd|38608 : 130.0) no description available & (reliability: 350.0) & (original description: Putative MBF1B, Description = Multiprotein-bridging factor 1b, PFAM = PF01381;PF08523)' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben044scf00007065ctg015_540-6115' '(at3g20640 : 191.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G61660.1); Has 3293 Blast hits to 1784 proteins in 150 species: Archae - 0; Bacteria - 39; Metazoa - 261; Fungi - 101; Plants - 1460; Viruses - 0; Other Eukaryotes - 1432 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative Os04g0493100, Description = OJ990528_30.9 protein, PFAM = )' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben044scf00015312ctg001_3320-7955' '(at3g20640 : 164.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G61660.1); Has 3293 Blast hits to 1784 proteins in 150 species: Archae - 0; Bacteria - 39; Metazoa - 261; Fungi - 101; Plants - 1460; Viruses - 0; Other Eukaryotes - 1432 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative B70, Description = Ethylene-responsive family protein, PFAM = )' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben044scf00037540ctg002_9991-16258' '(at4g29100 : 137.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G20100.1); Has 1864 Blast hits to 1723 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 76; Fungi - 29; Plants - 923; Viruses - 0; Other Eukaryotes - 836 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative ACT1, Description = Ethylene-responsive family protein, PFAM = )' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf00212_172534-179819' '(at3g58680 : 175.0) One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is developmentally regulated.; multiprotein bridging factor 1B (MBF1B); CONTAINS InterPro DOMAIN/s: Lambda repressor-like, DNA-binding (InterPro:IPR010982), Multiprotein bridging factor 1, N-terminal (InterPro:IPR013729), Helix-turn-helix type 3 (InterPro:IPR001387); BEST Arabidopsis thaliana protein match is: multiprotein bridging factor 1A (TAIR:AT2G42680.1); Has 690 Blast hits to 690 proteins in 262 species: Archae - 53; Bacteria - 10; Metazoa - 194; Fungi - 151; Plants - 135; Viruses - 2; Other Eukaryotes - 145 (source: NCBI BLink). & (gnl|cdd|38608 : 132.0) no description available & (reliability: 350.0) & (original description: Putative MBF1B, Description = Multiprotein-bridging factor 1b, PFAM = PF01381;PF08523)' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf00220_187447-195616' '(at4g29100 : 164.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G20100.1); Has 1864 Blast hits to 1723 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 76; Fungi - 29; Plants - 923; Viruses - 0; Other Eukaryotes - 836 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative ACT1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = )' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf00383_335681-340465' '(at1g27660 : 120.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G61660.3); Has 1680 Blast hits to 1555 proteins in 71 species: Archae - 0; Bacteria - 6; Metazoa - 95; Fungi - 29; Plants - 1158; Viruses - 0; Other Eukaryotes - 392 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative ACT1, Description = Transcription factor bHLH110, PFAM = )' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf00466_520875-524564' '(at3g62550 : 153.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT1G09740.1); Has 3064 Blast hits to 3005 proteins in 732 species: Archae - 271; Bacteria - 1876; Metazoa - 108; Fungi - 22; Plants - 723; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|84883 : 93.7) no description available & (reliability: 306.0) & (original description: Putative Sb03g012520, Description = Putative uncharacterized protein Sb03g012520, PFAM = PF00582)' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf00578_450235-455977' '(at3g20640 : 186.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G61660.1); Has 3293 Blast hits to 1784 proteins in 150 species: Archae - 0; Bacteria - 39; Metazoa - 261; Fungi - 101; Plants - 1460; Viruses - 0; Other Eukaryotes - 1432 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative ACT1, Description = Ethylene-responsive family protein, PFAM = )' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf01077_474248-479068' '(at1g05710 : 149.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to ethylene stimulus, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G31730.1). & (reliability: 298.0) & (original description: Putative B70, Description = Ethylene-responsive family protein, PFAM = )' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf01085_589105-604270' '(gnl|cdd|35552 : 401.0) no description available & (gnl|cdd|30859 : 384.0) no description available & (at1g55150 : 288.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 254.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 576.0) & (original description: Putative rhlE, Description = ATP-dependent RNA helicase RhlE, PFAM = PF00271;PF00270)' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf01147_513146-520846' '(at4g29100 : 158.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G20100.1); Has 1864 Blast hits to 1723 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 76; Fungi - 29; Plants - 923; Viruses - 0; Other Eukaryotes - 836 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative B70, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = )' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf01147_513649-519622' '(at4g29100 : 117.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G20100.1); Has 1864 Blast hits to 1723 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 76; Fungi - 29; Plants - 923; Viruses - 0; Other Eukaryotes - 836 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative B70, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = )' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf01341_290812-295656' '(at3g19500 : 138.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, embryo, root, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G49830.1); Has 1365 Blast hits to 1365 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1365; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative BHLH113, Description = Transcription factor bHLH113, PFAM = )' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf01587_175776-178213' '(at3g24500 : 152.0) One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is specifically elevated in response to pathogen infection, salinity, drought, heat, hydrogen peroxide, and application of abscisic acid or salicylic acid. Constitutive expression enhances the tolerance of transgenic plants to various biotic and abiotic stresses.; multiprotein bridging factor 1C (MBF1C); FUNCTIONS IN: transcription coactivator activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Multiprotein bridging factor 1, N-terminal (InterPro:IPR013729); BEST Arabidopsis thaliana protein match is: multiprotein bridging factor 1B (TAIR:AT3G58680.1). & (gnl|cdd|38608 : 121.0) no description available & (reliability: 304.0) & (original description: Putative MBF1C, Description = Multiprotein-bridging factor 1c, PFAM = PF08523;PF01381)' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf01681_502545-507376' '(at1g05710 : 133.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to ethylene stimulus, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G31730.1). & (reliability: 266.0) & (original description: Putative B70, Description = Ethylene-responsive family protein, PFAM = )' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf02406_411931-415283' '(at2g23610 : 218.0) Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on methyl salicylate, MeGA4, or MEGA9 in vitro.; methyl esterase 3 (MES3); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 4 (TAIR:AT2G23580.1); Has 1894 Blast hits to 1892 proteins in 428 species: Archae - 2; Bacteria - 1086; Metazoa - 0; Fungi - 17; Plants - 628; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (q40708|pir7a_orysa : 197.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 406.0) & (original description: Putative MES8, Description = Methylesterase 8, PFAM = PF12697)' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf02440_122-4787' '(at3g20640 : 165.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G61660.1); Has 3293 Blast hits to 1784 proteins in 150 species: Archae - 0; Bacteria - 39; Metazoa - 261; Fungi - 101; Plants - 1460; Viruses - 0; Other Eukaryotes - 1432 (source: NCBI BLink). & (reliability: 330.0) & (original description: Putative B70, Description = Ethylene-responsive family protein, PFAM = )' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf03080_400376-403492' '(at3g50440 : 214.0) Encodes a protein shown to have methyl jasmonate esterase activity in vitro. This protein does not act on methyl IAA, MeSA, MeGA4, or MEGA9 in vitro.; methyl esterase 10 (MES10); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 1 (TAIR:AT2G23620.1); Has 1602 Blast hits to 1600 proteins in 360 species: Archae - 4; Bacteria - 838; Metazoa - 1; Fungi - 25; Plants - 612; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (q40708|pir7a_orysa : 202.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 388.0) & (original description: Putative SABP2, Description = Salicylic acid-binding protein 2, PFAM = PF12697)' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf03385_371250-375634' '(at3g19500 : 141.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, embryo, root, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G49830.1); Has 1365 Blast hits to 1365 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1365; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative BHLH113, Description = Transcription factor bHLH113, PFAM = )' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf03422_249932-258406' '(at4g29100 : 138.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G20100.1); Has 1864 Blast hits to 1723 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 76; Fungi - 29; Plants - 923; Viruses - 0; Other Eukaryotes - 836 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative ACT1, Description = Ethylene-responsive family protein, PFAM = )' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf03670_429283-434645' '(at1g09740 : 228.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G11930.1); Has 5950 Blast hits to 5719 proteins in 1218 species: Archae - 487; Bacteria - 4382; Metazoa - 139; Fungi - 81; Plants - 701; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|30165 : 97.5) no description available & (reliability: 456.0) & (original description: Putative BnaC08g13820D, Description = BnaC08g13820D protein, PFAM = PF00582)' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf04236_225-5530' '(at3g58680 : 156.0) One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is developmentally regulated.; multiprotein bridging factor 1B (MBF1B); CONTAINS InterPro DOMAIN/s: Lambda repressor-like, DNA-binding (InterPro:IPR010982), Multiprotein bridging factor 1, N-terminal (InterPro:IPR013729), Helix-turn-helix type 3 (InterPro:IPR001387); BEST Arabidopsis thaliana protein match is: multiprotein bridging factor 1A (TAIR:AT2G42680.1); Has 690 Blast hits to 690 proteins in 262 species: Archae - 53; Bacteria - 10; Metazoa - 194; Fungi - 151; Plants - 135; Viruses - 2; Other Eukaryotes - 145 (source: NCBI BLink). & (gnl|cdd|38608 : 133.0) no description available & (reliability: 312.0) & (original description: Putative MBF1B, Description = Multiprotein-bridging factor 1b, PFAM = PF01381;PF08523)' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf04489_66610-69805' '(at3g16050 : 431.0) Encodes a protein with pyridoxal phosphate synthase activity whose transcripts were detected mostly in roots and accumulate during senescence. The protein was found in very low abundance, which prevented a specific localisation.; pyridoxine biosynthesis 1.2 (PDX1.2); FUNCTIONS IN: protein heterodimerization activity; INVOLVED IN: pyridoxal phosphate biosynthetic process, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Vitamin B6 biosynthesis protein (InterPro:IPR001852), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT5G01410.1); Has 3117 Blast hits to 3111 proteins in 1095 species: Archae - 240; Bacteria - 1784; Metazoa - 13; Fungi - 157; Plants - 173; Viruses - 0; Other Eukaryotes - 750 (source: NCBI BLink). & (gnl|cdd|36819 : 413.0) no description available & (q39963|pdx1_hevbr : 397.0) Probable pyridoxin biosynthesis protein ER1 (PDX1 homolog) (Ethylene-inducible protein HEVER) - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|73389 : 369.0) no description available & (reliability: 862.0) & (original description: Putative pdxS, Description = Pyridoxal 5'-phosphate synthase subunit PdxS, PFAM = PF01680)' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf05413_497055-502837' '(at3g20640 : 176.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G61660.1); Has 3293 Blast hits to 1784 proteins in 150 species: Archae - 0; Bacteria - 39; Metazoa - 261; Fungi - 101; Plants - 1460; Viruses - 0; Other Eukaryotes - 1432 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative Os04g0493100, Description = OJ990528_30.9 protein, PFAM = )' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf06030_24332-33238' '(at4g29100 : 259.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G20100.1); Has 1864 Blast hits to 1723 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 76; Fungi - 29; Plants - 923; Viruses - 0; Other Eukaryotes - 836 (source: NCBI BLink). & (reliability: 518.0) & (original description: Putative BHLH68, Description = Transcription factor bHLH68, PFAM = )' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf07761_25253-27633' '(gnl|cdd|47695 : 93.4) no description available & (at3g23220 : 85.9) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G23230.1); Has 5797 Blast hits to 5590 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5785; Viruses - 2; Other Eukaryotes - 10 (source: NCBI BLink). & (q9lw50|erf2_nicsy : 80.1) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (reliability: 168.0) & (original description: Putative ERF, Description = Ethylene-responsive transcription factor ERF098 family, PFAM = PF00847)' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf08873_215945-223948' '(at5g63120 : 685.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G55150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35552 : 581.0) no description available & (p46942|db10_nicsy : 421.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|30859 : 401.0) no description available & (reliability: 1264.0) & (original description: Putative RH20, Description = DEAD-box ATP-dependent RNA helicase 20, PFAM = PF00270;PF00271)' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf09610_85177-89969' '(at3g11930 : 168.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G58450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30165 : 97.9) no description available & (reliability: 336.0) & (original description: Putative BnaA05g27170D, Description = BnaA05g27170D protein, PFAM = PF00582)' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf09610_92253-109559' '(at3g11930 : 157.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G58450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30165 : 97.9) no description available & (reliability: 314.0) & (original description: Putative Sb01g021200, Description = Putative uncharacterized protein Sb01g021200, PFAM = PF00582)' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf10566_91581-99287' '(at1g27660 : 196.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G61660.3); Has 1680 Blast hits to 1555 proteins in 71 species: Archae - 0; Bacteria - 6; Metazoa - 95; Fungi - 29; Plants - 1158; Viruses - 0; Other Eukaryotes - 392 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative B70, Description = Ethylene-responsive family protein, PFAM = )' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf15419_157029-164865' '(at1g55150 : 734.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (gnl|cdd|35552 : 593.0) no description available & (p46942|db10_nicsy : 433.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|30859 : 394.0) no description available & (reliability: 1468.0) & (original description: Putative dbp2, Description = ATP-dependent RNA helicase DBP2, PFAM = PF00270;PF00271)' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf27908_177338-181997' '(at1g61660 : 138.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G20640.1). & (reliability: 266.0) & (original description: Putative ACT1, Description = Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 1, PFAM = )' T '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'niben101scf33352_12075-38896' '(at1g55150 : 763.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (gnl|cdd|35552 : 597.0) no description available & (p46942|db10_nicsy : 439.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|30859 : 394.0) no description available & (reliability: 1526.0) & (original description: Putative RH20, Description = DEAD-box ATP-dependent RNA helicase 20, PFAM = PF00271;PF00270)' T '17.6' 'hormone metabolism.gibberelin' '' '' '17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'nbv0.5scaffold278_887388-893715' '(at1g52800 : 307.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G52790.1); Has 6299 Blast hits to 6226 proteins in 763 species: Archae - 0; Bacteria - 707; Metazoa - 49; Fungi - 497; Plants - 4377; Viruses - 0; Other Eukaryotes - 669 (source: NCBI BLink). & (gnl|cdd|35365 : 216.0) no description available & (gnl|cdd|33294 : 111.0) no description available & (o04707|gao1a_wheat : 94.7) Gibberellin 20 oxidase 1-A (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-A) (Ta20ox1A) (TaGA20ox1-A) - Triticum aestivum (Wheat) & (reliability: 614.0) & (original description: Putative AOP1, Description = Probable 2-oxoglutarate-dependent dioxygenase AOP1, PFAM = PF03171;PF14226)' T '17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben044scf00014869ctg001_21343-24834' '(gnl|cdd|35365 : 171.0) no description available & (gnl|cdd|33294 : 134.0) no description available & (at4g25420 : 132.0) Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light.; GA20OX1; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 20 oxidase 2 (TAIR:AT5G51810.1); Has 8544 Blast hits to 8501 proteins in 990 species: Archae - 0; Bacteria - 1084; Metazoa - 124; Fungi - 981; Plants - 4942; Viruses - 0; Other Eukaryotes - 1413 (source: NCBI BLink). & (q06942|fl3h_maldo : 129.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 244.0) & (original description: Putative PGSC0003DMG400039990, Description = Gibberellin 20 oxidase, putative, PFAM = PF03171;PF14226)' T '17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben044scf00015177ctg017_633-2208' '(at1g52800 : 101.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G52790.1); Has 6299 Blast hits to 6226 proteins in 763 species: Archae - 0; Bacteria - 707; Metazoa - 49; Fungi - 497; Plants - 4377; Viruses - 0; Other Eukaryotes - 669 (source: NCBI BLink). & (gnl|cdd|35365 : 83.9) no description available & (reliability: 202.0) & (original description: Putative PGSC0003DMG400026033, Description = , PFAM = PF03171)' T '17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben044scf00046222ctg001_1-4690' '(at3g46500 : 264.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G46490.1); Has 7979 Blast hits to 7962 proteins in 970 species: Archae - 0; Bacteria - 1125; Metazoa - 119; Fungi - 1055; Plants - 4286; Viruses - 0; Other Eukaryotes - 1394 (source: NCBI BLink). & (gnl|cdd|33294 : 145.0) no description available & (gnl|cdd|35365 : 144.0) no description available & (reliability: 528.0) & (original description: Putative At1g35190, Description = 2OG-Fe(II) oxygenase family oxidoreductase, PFAM = PF03171)' T '17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf00123_8153-11588' '(at1g52820 : 265.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G03070.1); Has 7837 Blast hits to 7765 proteins in 980 species: Archae - 0; Bacteria - 1096; Metazoa - 64; Fungi - 795; Plants - 4683; Viruses - 0; Other Eukaryotes - 1199 (source: NCBI BLink). & (gnl|cdd|35365 : 179.0) no description available & (gnl|cdd|33294 : 98.8) no description available & (q8rvf5|gaox2_orysa : 95.9) Gibberellin 20 oxidase 2 (EC 1.14.11.-) (Gibberellin C-20 oxidase 2) (GA 20-oxidase 2) (Os20ox2) (Semidwarf-1 protein) - Oryza sativa (Rice) & (reliability: 530.0) & (original description: Putative BnaA06g01850D, Description = BnaA06g01850D protein, PFAM = PF03171)' T '17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf00188_236135-241098' '(at1g52790 : 333.0) encodes a putative oxidoreductase, 2OG-Fe(II) oxygenase family protein, similar to GS-AOP loci (GI:16118889, GI:16118887, GI:16118891, GI:16118893); contains PF03171 2OG-Fe(II) oxygenase superfamily domain; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, synergid; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G52800.1); Has 4044 Blast hits to 3977 proteins in 494 species: Archae - 0; Bacteria - 293; Metazoa - 17; Fungi - 226; Plants - 3128; Viruses - 0; Other Eukaryotes - 380 (source: NCBI BLink). & (gnl|cdd|35365 : 240.0) no description available & (gnl|cdd|33294 : 103.0) no description available & (p93771|gaox1_orysa : 81.6) Gibberellin 20 oxidase 1 (EC 1.14.11.-) (Gibberellin C-20 oxidase 1) (GA 20-oxidase 1) (Os20ox) - Oryza sativa (Rice) & (reliability: 656.0) & (original description: Putative BnaA06g37440D, Description = BnaA06g37440D protein, PFAM = PF14226;PF03171)' T '17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf00188_397269-400864' '(at1g52800 : 345.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G52790.1); Has 6299 Blast hits to 6226 proteins in 763 species: Archae - 0; Bacteria - 707; Metazoa - 49; Fungi - 497; Plants - 4377; Viruses - 0; Other Eukaryotes - 669 (source: NCBI BLink). & (gnl|cdd|35365 : 218.0) no description available & (gnl|cdd|33294 : 91.5) no description available & (reliability: 690.0) & (original description: Putative BnaC06g05700D, Description = BnaC06g05700D protein, PFAM = PF03171;PF14226)' T '17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf00188_419462-423624' '(at1g52820 : 457.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G03070.1); Has 7837 Blast hits to 7765 proteins in 980 species: Archae - 0; Bacteria - 1096; Metazoa - 64; Fungi - 795; Plants - 4683; Viruses - 0; Other Eukaryotes - 1199 (source: NCBI BLink). & (gnl|cdd|35365 : 272.0) no description available & (gnl|cdd|33294 : 130.0) no description available & (q8rvf5|gaox2_orysa : 95.1) Gibberellin 20 oxidase 2 (EC 1.14.11.-) (Gibberellin C-20 oxidase 2) (GA 20-oxidase 2) (Os20ox2) (Semidwarf-1 protein) - Oryza sativa (Rice) & (reliability: 914.0) & (original description: Putative AOP1, Description = Probable 2-oxoglutarate-dependent dioxygenase AOP1, PFAM = PF03171;PF14226)' T '17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf00188_420522-423418' '(at1g52820 : 167.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G03070.1); Has 7837 Blast hits to 7765 proteins in 980 species: Archae - 0; Bacteria - 1096; Metazoa - 64; Fungi - 795; Plants - 4683; Viruses - 0; Other Eukaryotes - 1199 (source: NCBI BLink). & (gnl|cdd|35365 : 116.0) no description available & (gnl|cdd|33294 : 85.0) no description available & (reliability: 334.0) & (original description: Putative AOP1, Description = 2-oxoglutarate-dependent dioxygenase, PFAM = PF03171)' T '17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf00878_82646-86608' '(at1g52800 : 245.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G52790.1); Has 6299 Blast hits to 6226 proteins in 763 species: Archae - 0; Bacteria - 707; Metazoa - 49; Fungi - 497; Plants - 4377; Viruses - 0; Other Eukaryotes - 669 (source: NCBI BLink). & (gnl|cdd|35365 : 191.0) no description available & (gnl|cdd|33294 : 106.0) no description available & (reliability: 490.0) & (original description: Putative AOP1, Description = Probable 2-oxoglutarate-dependent dioxygenase AOP1, PFAM = PF03171;PF14226)' T '17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf02426_241824-246869' '(at4g21200 : 354.0) Encodes a protein with gibberellin 2-oxidase activity which acts specifically on C-20 gibberellins.; gibberellin 2-oxidase 8 (GA2OX8); FUNCTIONS IN: C-20 gibberellin 2-beta-dioxygenase activity; INVOLVED IN: gibberellin metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 7 (TAIR:AT1G50960.1); Has 2972 Blast hits to 2961 proteins in 383 species: Archae - 0; Bacteria - 137; Metazoa - 2; Fungi - 57; Plants - 2676; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink). & (gnl|cdd|35365 : 242.0) no description available & (o04706|gao1b_wheat : 159.0) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (gnl|cdd|33294 : 153.0) no description available & (reliability: 708.0) & (original description: Putative GA2ox4, Description = Gibberellin biosynthesis-related protein GA2ox4, PFAM = PF14226;PF03171)' T '17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf02858_38107-66211' '(at4g16770 : 385.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction, flavonoid biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G16765.1); Has 6583 Blast hits to 6566 proteins in 839 species: Archae - 0; Bacteria - 934; Metazoa - 52; Fungi - 818; Plants - 3817; Viruses - 0; Other Eukaryotes - 962 (source: NCBI BLink). & (gnl|cdd|33294 : 243.0) no description available & (gnl|cdd|35365 : 241.0) no description available & (q07512|fls_pethy : 112.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Petunia hybrida (Petunia) & (reliability: 770.0) & (original description: Putative efe, Description = 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, PFAM = PF03171;PF14226)' T '17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf03313_121313-129616' '(at4g21200 : 360.0) Encodes a protein with gibberellin 2-oxidase activity which acts specifically on C-20 gibberellins.; gibberellin 2-oxidase 8 (GA2OX8); FUNCTIONS IN: C-20 gibberellin 2-beta-dioxygenase activity; INVOLVED IN: gibberellin metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 7 (TAIR:AT1G50960.1); Has 2972 Blast hits to 2961 proteins in 383 species: Archae - 0; Bacteria - 137; Metazoa - 2; Fungi - 57; Plants - 2676; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink). & (gnl|cdd|35365 : 238.0) no description available & (o04706|gao1b_wheat : 154.0) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (gnl|cdd|33294 : 149.0) no description available & (reliability: 720.0) & (original description: Putative GA2ox4, Description = Gibberellin biosynthesis-related protein GA2ox4, PFAM = PF03171;PF14226)' T '17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf03898_356915-368890' '(at4g21200 : 401.0) Encodes a protein with gibberellin 2-oxidase activity which acts specifically on C-20 gibberellins.; gibberellin 2-oxidase 8 (GA2OX8); FUNCTIONS IN: C-20 gibberellin 2-beta-dioxygenase activity; INVOLVED IN: gibberellin metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 7 (TAIR:AT1G50960.1); Has 2972 Blast hits to 2961 proteins in 383 species: Archae - 0; Bacteria - 137; Metazoa - 2; Fungi - 57; Plants - 2676; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink). & (gnl|cdd|35365 : 236.0) no description available & (gnl|cdd|33294 : 170.0) no description available & (o04705|gao1d_wheat : 130.0) Gibberellin 20 oxidase 1-D (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-D) (GA 20-oxidase 1-D) (Ta20ox1D) (TaGA20ox1-D) (Protein Wga20) - Triticum aestivum (Wheat) & (reliability: 802.0) & (original description: Putative GA2OX8, Description = Gibberellin 2-beta-dioxygenase 8, PFAM = PF03171;PF14226)' T '17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf06113_298561-310304' '(at4g21200 : 427.0) Encodes a protein with gibberellin 2-oxidase activity which acts specifically on C-20 gibberellins.; gibberellin 2-oxidase 8 (GA2OX8); FUNCTIONS IN: C-20 gibberellin 2-beta-dioxygenase activity; INVOLVED IN: gibberellin metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 7 (TAIR:AT1G50960.1); Has 2972 Blast hits to 2961 proteins in 383 species: Archae - 0; Bacteria - 137; Metazoa - 2; Fungi - 57; Plants - 2676; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink). & (gnl|cdd|35365 : 250.0) no description available & (gnl|cdd|33294 : 170.0) no description available & (p93771|gaox1_orysa : 154.0) Gibberellin 20 oxidase 1 (EC 1.14.11.-) (Gibberellin C-20 oxidase 1) (GA 20-oxidase 1) (Os20ox) - Oryza sativa (Rice) & (reliability: 854.0) & (original description: Putative GA2OX8, Description = Gibberellin 2-beta-dioxygenase 8, PFAM = PF14226;PF03171)' T '17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf10196_10759-13785' '(at4g23340 : 400.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G51310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 252.0) no description available & (gnl|cdd|33294 : 164.0) no description available & (o04706|gao1b_wheat : 126.0) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (reliability: 800.0) & (original description: Putative BnaA03g45910D, Description = BnaA03g45910D protein, PFAM = PF14226;PF03171)' T '17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf13608_81037-84399' '(at4g23340 : 371.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G51310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 238.0) no description available & (gnl|cdd|33294 : 167.0) no description available & (o04707|gao1a_wheat : 132.0) Gibberellin 20 oxidase 1-A (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-A) (Ta20ox1A) (TaGA20ox1-A) - Triticum aestivum (Wheat) & (reliability: 742.0) & (original description: Putative PGSC0003DMG400015796, Description = Gibberellin 20 oxidase 1-B, PFAM = PF14226;PF03171)' T '17.6.1' 'hormone metabolism.gibberelin.synthesis-degradation' 'niben101scf17767_64259-68202' '(at1g52800 : 286.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G52790.1); Has 6299 Blast hits to 6226 proteins in 763 species: Archae - 0; Bacteria - 707; Metazoa - 49; Fungi - 497; Plants - 4377; Viruses - 0; Other Eukaryotes - 669 (source: NCBI BLink). & (gnl|cdd|35365 : 194.0) no description available & (gnl|cdd|33294 : 115.0) no description available & (o04706|gao1b_wheat : 85.9) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (reliability: 572.0) & (original description: Putative AOP1, Description = Probable 2-oxoglutarate-dependent dioxygenase AOP1, PFAM = PF14226;PF03171)' T '17.6.1.1' 'hormone metabolism.gibberelin.synthesis-degradation.copalyl diphosphate synthase' 'nbv0.3scaffold25628_4987-15955' '(o04408|ksa_pea : 872.0) Ent-kaurene synthase A, chloroplast precursor (EC 5.5.1.13) (Ent-copalyl diphosphate synthase) (KSA) - Pisum sativum (Garden pea) & (at4g02780 : 839.0) Catalyzes the conversion of geranylgeranyl pyrophosphate (GGPP) to copalyl pyrophosphate (CPP) of gibberellin biosynthesis; GA REQUIRING 1 (GA1); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT1G79460.1); Has 1979 Blast hits to 1971 proteins in 256 species: Archae - 0; Bacteria - 97; Metazoa - 0; Fungi - 61; Plants - 1817; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|29478 : 365.0) no description available & (reliability: 1678.0) & (original description: Putative cps, Description = Copalyl diphosphate, PFAM = PF01397;PF03936)' T '17.6.1.1' 'hormone metabolism.gibberelin.synthesis-degradation.copalyl diphosphate synthase' 'nbv0.5scaffold1557_10917-38714' '(o04408|ksa_pea : 651.0) Ent-kaurene synthase A, chloroplast precursor (EC 5.5.1.13) (Ent-copalyl diphosphate synthase) (KSA) - Pisum sativum (Garden pea) & (at4g02780 : 625.0) Catalyzes the conversion of geranylgeranyl pyrophosphate (GGPP) to copalyl pyrophosphate (CPP) of gibberellin biosynthesis; GA REQUIRING 1 (GA1); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT1G79460.1); Has 1979 Blast hits to 1971 proteins in 256 species: Archae - 0; Bacteria - 97; Metazoa - 0; Fungi - 61; Plants - 1817; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|29478 : 307.0) no description available & (reliability: 1250.0) & (original description: Putative CPS2, Description = Copal-8-ol diphosphate hydratase, chloroplastic, PFAM = PF01397;PF03936)' T '17.6.1.1' 'hormone metabolism.gibberelin.synthesis-degradation.copalyl diphosphate synthase' 'niben044scf00009452ctg015_1-8299' '(at4g02780 : 274.0) Catalyzes the conversion of geranylgeranyl pyrophosphate (GGPP) to copalyl pyrophosphate (CPP) of gibberellin biosynthesis; GA REQUIRING 1 (GA1); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT1G79460.1); Has 1979 Blast hits to 1971 proteins in 256 species: Archae - 0; Bacteria - 97; Metazoa - 0; Fungi - 61; Plants - 1817; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (o04408|ksa_pea : 262.0) Ent-kaurene synthase A, chloroplast precursor (EC 5.5.1.13) (Ent-copalyl diphosphate synthase) (KSA) - Pisum sativum (Garden pea) & (reliability: 548.0) & (original description: Putative ac22, Description = Copalyl diphosphate synthase, PFAM = )' T '17.6.1.1' 'hormone metabolism.gibberelin.synthesis-degradation.copalyl diphosphate synthase' 'niben101scf05559_51908-65326' '(o04408|ksa_pea : 890.0) Ent-kaurene synthase A, chloroplast precursor (EC 5.5.1.13) (Ent-copalyl diphosphate synthase) (KSA) - Pisum sativum (Garden pea) & (at4g02780 : 862.0) Catalyzes the conversion of geranylgeranyl pyrophosphate (GGPP) to copalyl pyrophosphate (CPP) of gibberellin biosynthesis; GA REQUIRING 1 (GA1); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT1G79460.1); Has 1979 Blast hits to 1971 proteins in 256 species: Archae - 0; Bacteria - 97; Metazoa - 0; Fungi - 61; Plants - 1817; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|29478 : 377.0) no description available & (reliability: 1724.0) & (original description: Putative cps, Description = Copalyl diphosphate, PFAM = PF03936;PF01397)' T '17.6.1.2' 'hormone metabolism.gibberelin.synthesis-degradation.ent-kaurene synthase' 'nbv0.3scaffold6347_8899-14117' '(q39548|ksb_cucma : 203.0) Ent-kaurene synthase B, chloroplast precursor (EC 4.2.3.19) (KSB) - Cucurbita maxima (Pumpkin) (Winter squash) & (at1g79460 : 185.0) Encodes for a protein with ent-kaurene synthase B activity which catalyzes the second step in the cyclization of GGPP to ent-kaurene in the gibberellins biosynthetic pathway.; GA REQUIRING 2 (GA2); FUNCTIONS IN: ent-kaurene synthase activity; INVOLVED IN: gibberellin biosynthetic process, gibberellic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase 04 (TAIR:AT1G61120.1); Has 2032 Blast hits to 2016 proteins in 248 species: Archae - 0; Bacteria - 69; Metazoa - 0; Fungi - 62; Plants - 1897; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 370.0) & (original description: Putative KS, Description = Ent-kaurene synthase, PFAM = )' T '17.6.1.2' 'hormone metabolism.gibberelin.synthesis-degradation.ent-kaurene synthase' 'nbv0.5scaffold368_228354-237716' '(q39548|ksb_cucma : 776.0) Ent-kaurene synthase B, chloroplast precursor (EC 4.2.3.19) (KSB) - Cucurbita maxima (Pumpkin) (Winter squash) & (at1g79460 : 731.0) Encodes for a protein with ent-kaurene synthase B activity which catalyzes the second step in the cyclization of GGPP to ent-kaurene in the gibberellins biosynthetic pathway.; GA REQUIRING 2 (GA2); FUNCTIONS IN: ent-kaurene synthase activity; INVOLVED IN: gibberellin biosynthetic process, gibberellic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase 04 (TAIR:AT1G61120.1); Has 2032 Blast hits to 2016 proteins in 248 species: Archae - 0; Bacteria - 69; Metazoa - 0; Fungi - 62; Plants - 1897; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|29478 : 421.0) no description available & (reliability: 1462.0) & (original description: Putative ks3L, Description = Kaurene synthase, PFAM = PF03936;PF01397)' T '17.6.1.2' 'hormone metabolism.gibberelin.synthesis-degradation.ent-kaurene synthase' 'niben101scf00885_68173-71977' '(q39548|ksb_cucma : 138.0) Ent-kaurene synthase B, chloroplast precursor (EC 4.2.3.19) (KSB) - Cucurbita maxima (Pumpkin) (Winter squash) & (at1g79460 : 136.0) Encodes for a protein with ent-kaurene synthase B activity which catalyzes the second step in the cyclization of GGPP to ent-kaurene in the gibberellins biosynthetic pathway.; GA REQUIRING 2 (GA2); FUNCTIONS IN: ent-kaurene synthase activity; INVOLVED IN: gibberellin biosynthetic process, gibberellic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase 04 (TAIR:AT1G61120.1); Has 2032 Blast hits to 2016 proteins in 248 species: Archae - 0; Bacteria - 69; Metazoa - 0; Fungi - 62; Plants - 1897; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative ag1, Description = Ent-kaurene synthase, PFAM = )' T '17.6.1.2' 'hormone metabolism.gibberelin.synthesis-degradation.ent-kaurene synthase' 'niben101scf02461_401687-411155' '(q39548|ksb_cucma : 760.0) Ent-kaurene synthase B, chloroplast precursor (EC 4.2.3.19) (KSB) - Cucurbita maxima (Pumpkin) (Winter squash) & (at1g79460 : 717.0) Encodes for a protein with ent-kaurene synthase B activity which catalyzes the second step in the cyclization of GGPP to ent-kaurene in the gibberellins biosynthetic pathway.; GA REQUIRING 2 (GA2); FUNCTIONS IN: ent-kaurene synthase activity; INVOLVED IN: gibberellin biosynthetic process, gibberellic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase 04 (TAIR:AT1G61120.1); Has 2032 Blast hits to 2016 proteins in 248 species: Archae - 0; Bacteria - 69; Metazoa - 0; Fungi - 62; Plants - 1897; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|29478 : 413.0) no description available & (reliability: 1434.0) & (original description: Putative ks3L, Description = Kaurene synthase, PFAM = PF03936;PF01397)' T '17.6.1.2' 'hormone metabolism.gibberelin.synthesis-degradation.ent-kaurene synthase' 'niben101scf02461_402149-411158' '(q39548|ksb_cucma : 607.0) Ent-kaurene synthase B, chloroplast precursor (EC 4.2.3.19) (KSB) - Cucurbita maxima (Pumpkin) (Winter squash) & (at1g79460 : 563.0) Encodes for a protein with ent-kaurene synthase B activity which catalyzes the second step in the cyclization of GGPP to ent-kaurene in the gibberellins biosynthetic pathway.; GA REQUIRING 2 (GA2); FUNCTIONS IN: ent-kaurene synthase activity; INVOLVED IN: gibberellin biosynthetic process, gibberellic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase 04 (TAIR:AT1G61120.1); Has 2032 Blast hits to 2016 proteins in 248 species: Archae - 0; Bacteria - 69; Metazoa - 0; Fungi - 62; Plants - 1897; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|29478 : 425.0) no description available & (reliability: 1126.0) & (original description: Putative TPS1, Description = Acyclic sesquiterpene synthase, PFAM = PF01397;PF03936)' T '17.6.1.3' 'hormone metabolism.gibberelin.synthesis-degradation.ent-kaurene oxidase' 'niben101scf02322_813252-818804' '(at5g25900 : 524.0) Encodes a member of the CYP701A cytochrome p450 family that is involved in later steps of the gibberellin biosynthetic pathway.; GA requiring 3 (GA3); FUNCTIONS IN: oxygen binding; INVOLVED IN: gibberellin biosynthetic process, gibberellic acid mediated signaling pathway, ent-kaurene oxidation to kaurenoic acid; LOCATED IN: chloroplast outer membrane, endoplasmic reticulum, microsome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G07990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35378 : 285.0) no description available & (gnl|cdd|84486 : 207.0) no description available & (o48956|c98a1_sorbi : 189.0) Cytochrome P450 98A1 (EC 1.14.-.-) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (reliability: 1048.0) & (original description: Putative ko, Description = Ent-kaurene oxidase, PFAM = PF00067;PF00067)' T '17.6.1.4' 'hormone metabolism.gibberelin.synthesis-degradation.ent-kaurenoic acid hydroxylase/oxygenase' 'niben044scf00042696ctg006_1-1472' '(at2g32440 : 85.1) ent-kaurenoic acid hydroxylase (KAO2); ent-kaurenoic acid hydroxylase 2 (KAO2); CONTAINS InterPro DOMAIN/s: Cytochrome P450, B-class (InterPro:IPR002397), Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 88, subfamily A, polypeptide 3 (TAIR:AT1G05160.1). & (reliability: 170.2) & (original description: Putative CYP88C1, Description = Cytochrome P450 monooxygenase, PFAM = )' T '17.6.1.4' 'hormone metabolism.gibberelin.synthesis-degradation.ent-kaurenoic acid hydroxylase/oxygenase' 'niben101scf02437_2408-8226' '(at2g32440 : 339.0) ent-kaurenoic acid hydroxylase (KAO2); ent-kaurenoic acid hydroxylase 2 (KAO2); CONTAINS InterPro DOMAIN/s: Cytochrome P450, B-class (InterPro:IPR002397), Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 88, subfamily A, polypeptide 3 (TAIR:AT1G05160.1). & (q9axh9|kao1_horvu : 292.0) Ent-kaurenoic acid oxidase 1 (EC 1.14.13.79) (gpr5) - Hordeum vulgare (Barley) & (gnl|cdd|35379 : 221.0) no description available & (gnl|cdd|84486 : 175.0) no description available & (reliability: 678.0) & (original description: Putative CYP88D6, Description = Beta-amyrin 11-oxidase, PFAM = PF00067)' T '17.6.1.4' 'hormone metabolism.gibberelin.synthesis-degradation.ent-kaurenoic acid hydroxylase/oxygenase' 'niben101scf07482_58899-65328' '(at1g05160 : 700.0) Encodes an ent-kaurenoic acid hydroxylase, a member of the CYP88A cytochrome p450 family.; "cytochrome P450, family 88, subfamily A, polypeptide 3" (CYP88A3); CONTAINS InterPro DOMAIN/s: Cytochrome P450, B-class (InterPro:IPR002397), Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: ent-kaurenoic acid hydroxylase 2 (TAIR:AT2G32440.2); Has 36129 Blast hits to 36053 proteins in 1833 species: Archae - 82; Bacteria - 8530; Metazoa - 11168; Fungi - 6175; Plants - 8031; Viruses - 6; Other Eukaryotes - 2137 (source: NCBI BLink). & (q9axh9|kao1_horvu : 605.0) Ent-kaurenoic acid oxidase 1 (EC 1.14.13.79) (gpr5) - Hordeum vulgare (Barley) & (gnl|cdd|35379 : 279.0) no description available & (gnl|cdd|32307 : 198.0) no description available & (reliability: 1400.0) & (original description: Putative KAO1, Description = Ent-kaurenoic acid oxidase 1, PFAM = PF00067)' T '17.6.1.11' 'hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase' 'nbv0.5scaffold849_175083-179359' '(at4g25420 : 504.0) Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light.; GA20OX1; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 20 oxidase 2 (TAIR:AT5G51810.1); Has 8544 Blast hits to 8501 proteins in 990 species: Archae - 0; Bacteria - 1084; Metazoa - 124; Fungi - 981; Plants - 4942; Viruses - 0; Other Eukaryotes - 1413 (source: NCBI BLink). & (o04706|gao1b_wheat : 501.0) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (gnl|cdd|35365 : 283.0) no description available & (gnl|cdd|33294 : 178.0) no description available & (reliability: 1008.0) & (original description: Putative GA20OX1, Description = Gibberellin 20 oxidase 1, PFAM = PF03171;PF14226)' T '17.6.1.11' 'hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase' 'niben044scf00014869ctg001_21343-24834' '(gnl|cdd|35365 : 171.0) no description available & (gnl|cdd|33294 : 134.0) no description available & (at4g25420 : 132.0) Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light.; GA20OX1; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 20 oxidase 2 (TAIR:AT5G51810.1); Has 8544 Blast hits to 8501 proteins in 990 species: Archae - 0; Bacteria - 1084; Metazoa - 124; Fungi - 981; Plants - 4942; Viruses - 0; Other Eukaryotes - 1413 (source: NCBI BLink). & (q06942|fl3h_maldo : 129.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 264.0) & (original description: Putative PGSC0003DMG400039990, Description = Gibberellin 20 oxidase, putative, PFAM = PF03171;PF14226)' T '17.6.1.11' 'hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase' 'niben101scf01036_303268-307466' '(gnl|cdd|35365 : 266.0) no description available & (at5g07200 : 206.0) encodes a gibberellin 20-oxidase.; gibberellin 20-oxidase 3 (GA20OX3); CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 20-oxidase 4 (TAIR:AT1G60980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o04706|gao1b_wheat : 203.0) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (gnl|cdd|33294 : 188.0) no description available & (reliability: 412.0) & (original description: Putative RCOM_0191340, Description = Gibberellin 20 oxidase, putative, PFAM = PF03171;PF14226)' T '17.6.1.11' 'hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase' 'niben101scf02083_313971-317570' '(at4g25420 : 515.0) Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light.; GA20OX1; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 20 oxidase 2 (TAIR:AT5G51810.1); Has 8544 Blast hits to 8501 proteins in 990 species: Archae - 0; Bacteria - 1084; Metazoa - 124; Fungi - 981; Plants - 4942; Viruses - 0; Other Eukaryotes - 1413 (source: NCBI BLink). & (o04705|gao1d_wheat : 500.0) Gibberellin 20 oxidase 1-D (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-D) (GA 20-oxidase 1-D) (Ta20ox1D) (TaGA20ox1-D) (Protein Wga20) - Triticum aestivum (Wheat) & (gnl|cdd|35365 : 291.0) no description available & (gnl|cdd|33294 : 173.0) no description available & (reliability: 1030.0) & (original description: Putative GA20OX1, Description = Gibberellin 20 oxidase 1, PFAM = PF03171;PF14226)' T '17.6.1.11' 'hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase' 'niben101scf04290_222702-226624' '(gnl|cdd|35365 : 213.0) no description available & (gnl|cdd|33294 : 174.0) no description available & (at2g30830 : 134.0) encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G30840.1); Has 8436 Blast hits to 8403 proteins in 1008 species: Archae - 0; Bacteria - 1171; Metazoa - 115; Fungi - 900; Plants - 4884; Viruses - 0; Other Eukaryotes - 1366 (source: NCBI BLink). & (q08506|acco1_pethy : 119.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 244.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T '17.6.1.11' 'hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase' 'niben101scf06024_166351-171824' '(o04705|gao1d_wheat : 471.0) Gibberellin 20 oxidase 1-D (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-D) (GA 20-oxidase 1-D) (Ta20ox1D) (TaGA20ox1-D) (Protein Wga20) - Triticum aestivum (Wheat) & (at4g25420 : 456.0) Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light.; GA20OX1; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 20 oxidase 2 (TAIR:AT5G51810.1); Has 8544 Blast hits to 8501 proteins in 990 species: Archae - 0; Bacteria - 1084; Metazoa - 124; Fungi - 981; Plants - 4942; Viruses - 0; Other Eukaryotes - 1413 (source: NCBI BLink). & (gnl|cdd|35365 : 289.0) no description available & (gnl|cdd|33294 : 169.0) no description available & (reliability: 912.0) & (original description: Putative GA20ox1D, Description = Gibberellin 20 oxidase 1-D, PFAM = PF14226;PF03171)' T '17.6.1.11' 'hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase' 'niben101scf06078_374466-378001' '(gnl|cdd|35365 : 274.0) no description available & (at4g25420 : 206.0) Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light.; GA20OX1; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 20 oxidase 2 (TAIR:AT5G51810.1); Has 8544 Blast hits to 8501 proteins in 990 species: Archae - 0; Bacteria - 1084; Metazoa - 124; Fungi - 981; Plants - 4942; Viruses - 0; Other Eukaryotes - 1413 (source: NCBI BLink). & (o04707|gao1a_wheat : 200.0) Gibberellin 20 oxidase 1-A (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-A) (Ta20ox1A) (TaGA20ox1-A) - Triticum aestivum (Wheat) & (gnl|cdd|33294 : 193.0) no description available & (reliability: 412.0) & (original description: Putative RCOM_0191340, Description = Gibberellin 20 oxidase, putative, PFAM = PF14226;PF03171)' T '17.6.1.11' 'hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase' 'niben101scf06404_122-4222' '(o04705|gao1d_wheat : 472.0) Gibberellin 20 oxidase 1-D (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-D) (GA 20-oxidase 1-D) (Ta20ox1D) (TaGA20ox1-D) (Protein Wga20) - Triticum aestivum (Wheat) & (at4g25420 : 450.0) Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light.; GA20OX1; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 20 oxidase 2 (TAIR:AT5G51810.1); Has 8544 Blast hits to 8501 proteins in 990 species: Archae - 0; Bacteria - 1084; Metazoa - 124; Fungi - 981; Plants - 4942; Viruses - 0; Other Eukaryotes - 1413 (source: NCBI BLink). & (gnl|cdd|35365 : 292.0) no description available & (gnl|cdd|33294 : 174.0) no description available & (reliability: 900.0) & (original description: Putative GA20ox1D, Description = Gibberellin 20 oxidase 1-D, PFAM = PF14226;PF03171)' T '17.6.1.11' 'hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase' 'niben101scf10027_73837-78161' '(at4g25420 : 503.0) Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light.; GA20OX1; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 20 oxidase 2 (TAIR:AT5G51810.1); Has 8544 Blast hits to 8501 proteins in 990 species: Archae - 0; Bacteria - 1084; Metazoa - 124; Fungi - 981; Plants - 4942; Viruses - 0; Other Eukaryotes - 1413 (source: NCBI BLink). & (o04706|gao1b_wheat : 498.0) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (gnl|cdd|35365 : 293.0) no description available & (gnl|cdd|33294 : 183.0) no description available & (reliability: 1006.0) & (original description: Putative GA20OX1, Description = Gibberellin 20 oxidase 1, PFAM = PF03171;PF14226)' T '17.6.1.11' 'hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase' 'niben101scf13608_81037-84399' '(at4g23340 : 371.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G51310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 238.0) no description available & (gnl|cdd|33294 : 167.0) no description available & (o04707|gao1a_wheat : 132.0) Gibberellin 20 oxidase 1-A (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-A) (Ta20ox1A) (TaGA20ox1-A) - Triticum aestivum (Wheat) & (reliability: 686.0) & (original description: Putative PGSC0003DMG400015796, Description = Gibberellin 20 oxidase 1-B, PFAM = PF14226;PF03171)' T '17.6.1.11' 'hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase' 'niben101scf18902_36260-50140' '(o04706|gao1b_wheat : 356.0) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (at5g51810 : 352.0) Encodes gibberellin 20-oxidase. Involved in gibberellin biosynthesis. Up-regulated by far red light in elongating petioles. Not regulated by a circadian clock.; gibberellin 20 oxidase 2 (GA20OX2); CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G25420.1); Has 8534 Blast hits to 8499 proteins in 990 species: Archae - 0; Bacteria - 1114; Metazoa - 120; Fungi - 1000; Plants - 4903; Viruses - 0; Other Eukaryotes - 1397 (source: NCBI BLink). & (gnl|cdd|35365 : 271.0) no description available & (gnl|cdd|33294 : 156.0) no description available & (reliability: 704.0) & (original description: Putative GA20OX5, Description = Gibberellin 20 oxidase 5, PFAM = PF03171;PF14226)' T '17.6.1.12' 'hormone metabolism.gibberelin.synthesis-degradation.GA3 oxidase' 'niben044scf00019083ctg001_747-4271' '(at1g15550 : 399.0) Involved in later steps of the gibberellic acid biosynthetic pathway. Activated by AGAMOUS in a cal-1, ap1-1 background. Deletion of 208 bp from -1016 to -809 (Δ-808) resulted in loss of GA-negative feedback (this sequence, which contains a 43-bp sequence GNFEI, was shown to be sufficient for GA-negative feedback).; gibberellin 3-oxidase 1 (GA3OX1); CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 3-oxidase 2 (TAIR:AT1G80340.1); Has 8504 Blast hits to 8472 proteins in 995 species: Archae - 0; Bacteria - 1119; Metazoa - 109; Fungi - 1012; Plants - 4925; Viruses - 0; Other Eukaryotes - 1339 (source: NCBI BLink). & (gnl|cdd|35365 : 308.0) no description available & (q3i409|g3o23_wheat : 277.0) Gibberellin 3-beta-dioxygenase 2-3 (EC 1.14.11.15) (Gibberellin 3 beta-hydroxylase 2-3) (Gibberellin 3-oxidase 2-3) - Triticum aestivum (Wheat) & (gnl|cdd|33294 : 168.0) no description available & (reliability: 798.0) & (original description: Putative LE, Description = Gibberellin 3-beta-dioxygenase 1, PFAM = PF03171;PF14226)' T '17.6.1.12' 'hormone metabolism.gibberelin.synthesis-degradation.GA3 oxidase' 'niben101scf04424_8529-12464' '(at1g15550 : 397.0) Involved in later steps of the gibberellic acid biosynthetic pathway. Activated by AGAMOUS in a cal-1, ap1-1 background. Deletion of 208 bp from -1016 to -809 (Δ-808) resulted in loss of GA-negative feedback (this sequence, which contains a 43-bp sequence GNFEI, was shown to be sufficient for GA-negative feedback).; gibberellin 3-oxidase 1 (GA3OX1); CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 3-oxidase 2 (TAIR:AT1G80340.1); Has 8504 Blast hits to 8472 proteins in 995 species: Archae - 0; Bacteria - 1119; Metazoa - 109; Fungi - 1012; Plants - 4925; Viruses - 0; Other Eukaryotes - 1339 (source: NCBI BLink). & (gnl|cdd|35365 : 303.0) no description available & (q3i409|g3o23_wheat : 271.0) Gibberellin 3-beta-dioxygenase 2-3 (EC 1.14.11.15) (Gibberellin 3 beta-hydroxylase 2-3) (Gibberellin 3-oxidase 2-3) - Triticum aestivum (Wheat) & (gnl|cdd|33294 : 161.0) no description available & (reliability: 794.0) & (original description: Putative LE, Description = Gibberellin 3-beta-dioxygenase 1, PFAM = PF03171;PF14226)' T '17.6.1.12' 'hormone metabolism.gibberelin.synthesis-degradation.GA3 oxidase' 'niben101scf04820_492105-495629' '(at1g15550 : 400.0) Involved in later steps of the gibberellic acid biosynthetic pathway. Activated by AGAMOUS in a cal-1, ap1-1 background. Deletion of 208 bp from -1016 to -809 (Δ-808) resulted in loss of GA-negative feedback (this sequence, which contains a 43-bp sequence GNFEI, was shown to be sufficient for GA-negative feedback).; gibberellin 3-oxidase 1 (GA3OX1); CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 3-oxidase 2 (TAIR:AT1G80340.1); Has 8504 Blast hits to 8472 proteins in 995 species: Archae - 0; Bacteria - 1119; Metazoa - 109; Fungi - 1012; Plants - 4925; Viruses - 0; Other Eukaryotes - 1339 (source: NCBI BLink). & (gnl|cdd|35365 : 305.0) no description available & (q3i409|g3o23_wheat : 276.0) Gibberellin 3-beta-dioxygenase 2-3 (EC 1.14.11.15) (Gibberellin 3 beta-hydroxylase 2-3) (Gibberellin 3-oxidase 2-3) - Triticum aestivum (Wheat) & (gnl|cdd|33294 : 167.0) no description available & (reliability: 800.0) & (original description: Putative GA3OX1, Description = Gibberellin 3-beta-dioxygenase 1, PFAM = PF14226;PF03171)' T '17.6.1.13' 'hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase' 'nbv0.5scaffold215_616177-619358' '(q9sq80|g2ox1_pea : 456.0) Gibberellin 2-beta-dioxygenase 1 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 1) (Gibberellin 2-oxidase 1) (GA 2-oxidase 1) (Protein SLENDER) - Pisum sativum (Garden pea) & (at1g30040 : 382.0) Encodes a gibberellin 2-oxidase that acts on C-19 gibberellins. AtGA2OX2 expression is responsive to cytokinin and KNOX activities.; gibberellin 2-oxidase (GA2OX2); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 3 (TAIR:AT2G34555.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 257.0) no description available & (gnl|cdd|33294 : 150.0) no description available & (reliability: 764.0) & (original description: Putative GA2OX1, Description = Gibberellin 2-beta-dioxygenase 1, PFAM = PF14226;PF03171)' T '17.6.1.13' 'hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase' 'nbv0.5scaffold8289_36729-40335' '(q9sq80|g2ox1_pea : 414.0) Gibberellin 2-beta-dioxygenase 1 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 1) (Gibberellin 2-oxidase 1) (GA 2-oxidase 1) (Protein SLENDER) - Pisum sativum (Garden pea) & (at1g30040 : 405.0) Encodes a gibberellin 2-oxidase that acts on C-19 gibberellins. AtGA2OX2 expression is responsive to cytokinin and KNOX activities.; gibberellin 2-oxidase (GA2OX2); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 3 (TAIR:AT2G34555.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 230.0) no description available & (gnl|cdd|33294 : 129.0) no description available & (reliability: 810.0) & (original description: Putative GA2OX2, Description = Gibberellin 2-beta-dioxygenase 2, PFAM = PF03171;PF14226)' T '17.6.1.13' 'hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase' 'niben044scf00004282ctg023_13609-17271' '(q9sq80|g2ox1_pea : 405.0) Gibberellin 2-beta-dioxygenase 1 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 1) (Gibberellin 2-oxidase 1) (GA 2-oxidase 1) (Protein SLENDER) - Pisum sativum (Garden pea) & (at1g30040 : 394.0) Encodes a gibberellin 2-oxidase that acts on C-19 gibberellins. AtGA2OX2 expression is responsive to cytokinin and KNOX activities.; gibberellin 2-oxidase (GA2OX2); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 3 (TAIR:AT2G34555.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 222.0) no description available & (gnl|cdd|33294 : 111.0) no description available & (reliability: 788.0) & (original description: Putative GA2OX2, Description = Gibberellin 2-beta-dioxygenase 2, PFAM = PF14226;PF03171)' T '17.6.1.13' 'hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase' 'niben044scf00024535ctg003_4195-8820' '(q9sq80|g2ox1_pea : 448.0) Gibberellin 2-beta-dioxygenase 1 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 1) (Gibberellin 2-oxidase 1) (GA 2-oxidase 1) (Protein SLENDER) - Pisum sativum (Garden pea) & (at1g30040 : 367.0) Encodes a gibberellin 2-oxidase that acts on C-19 gibberellins. AtGA2OX2 expression is responsive to cytokinin and KNOX activities.; gibberellin 2-oxidase (GA2OX2); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 3 (TAIR:AT2G34555.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 250.0) no description available & (gnl|cdd|33294 : 149.0) no description available & (reliability: 734.0) & (original description: Putative GA2OX1, Description = Gibberellin 2-beta-dioxygenase 1, PFAM = PF14226;PF03171)' T '17.6.1.13' 'hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase' 'niben044scf00040048ctg012_352-3705' '(q9sq80|g2ox1_pea : 446.0) Gibberellin 2-beta-dioxygenase 1 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 1) (Gibberellin 2-oxidase 1) (GA 2-oxidase 1) (Protein SLENDER) - Pisum sativum (Garden pea) & (at1g30040 : 379.0) Encodes a gibberellin 2-oxidase that acts on C-19 gibberellins. AtGA2OX2 expression is responsive to cytokinin and KNOX activities.; gibberellin 2-oxidase (GA2OX2); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 3 (TAIR:AT2G34555.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 257.0) no description available & (gnl|cdd|33294 : 149.0) no description available & (reliability: 758.0) & (original description: Putative GA2ox1, Description = Gibberellin 2-oxidase 1, PFAM = PF03171;PF14226)' T '17.6.1.13' 'hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase' 'niben044scf00044232ctg006_15605-21462' '(q9sq80|g2ox1_pea : 412.0) Gibberellin 2-beta-dioxygenase 1 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 1) (Gibberellin 2-oxidase 1) (GA 2-oxidase 1) (Protein SLENDER) - Pisum sativum (Garden pea) & (at1g30040 : 396.0) Encodes a gibberellin 2-oxidase that acts on C-19 gibberellins. AtGA2OX2 expression is responsive to cytokinin and KNOX activities.; gibberellin 2-oxidase (GA2OX2); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 3 (TAIR:AT2G34555.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 229.0) no description available & (gnl|cdd|33294 : 123.0) no description available & (reliability: 792.0) & (original description: Putative GA2OX2, Description = Gibberellin 2-beta-dioxygenase 2, PFAM = PF03171;PF14226)' T '17.6.1.13' 'hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase' 'niben101scf01517_393760-398086' '(q9sq80|g2ox1_pea : 449.0) Gibberellin 2-beta-dioxygenase 1 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 1) (Gibberellin 2-oxidase 1) (GA 2-oxidase 1) (Protein SLENDER) - Pisum sativum (Garden pea) & (at1g30040 : 367.0) Encodes a gibberellin 2-oxidase that acts on C-19 gibberellins. AtGA2OX2 expression is responsive to cytokinin and KNOX activities.; gibberellin 2-oxidase (GA2OX2); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 3 (TAIR:AT2G34555.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 249.0) no description available & (gnl|cdd|33294 : 146.0) no description available & (reliability: 734.0) & (original description: Putative GA2OX1, Description = Gibberellin 2-beta-dioxygenase 1, PFAM = PF03171;PF14226)' T '17.6.1.13' 'hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase' 'niben101scf02589_691998-699143' '(q9xhm5|g2ox2_pea : 375.0) Gibberellin 2-beta-dioxygenase 2 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 2) (Gibberellin 2-oxidase 2) (GA 2-oxidase 2) - Pisum sativum (Garden pea) & (at1g02400 : 330.0) Encodes a gibberellin 2-oxidase that acts on C19 gibberellins but not C20 gibberellins.; gibberellin 2-oxidase 6 (GA2OX6); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 4 (TAIR:AT1G47990.1); Has 8143 Blast hits to 8109 proteins in 973 species: Archae - 0; Bacteria - 1087; Metazoa - 68; Fungi - 840; Plants - 4773; Viruses - 0; Other Eukaryotes - 1375 (source: NCBI BLink). & (gnl|cdd|35365 : 263.0) no description available & (gnl|cdd|33294 : 138.0) no description available & (reliability: 660.0) & (original description: Putative GA2OX2, Description = Gibberellin 2-beta-dioxygenase 2, PFAM = PF03171;PF14226)' T '17.6.1.13' 'hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase' 'niben101scf03094_311684-317771' '(q9sq80|g2ox1_pea : 422.0) Gibberellin 2-beta-dioxygenase 1 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 1) (Gibberellin 2-oxidase 1) (GA 2-oxidase 1) (Protein SLENDER) - Pisum sativum (Garden pea) & (at1g30040 : 405.0) Encodes a gibberellin 2-oxidase that acts on C-19 gibberellins. AtGA2OX2 expression is responsive to cytokinin and KNOX activities.; gibberellin 2-oxidase (GA2OX2); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 3 (TAIR:AT2G34555.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 227.0) no description available & (gnl|cdd|33294 : 121.0) no description available & (reliability: 810.0) & (original description: Putative GA2OX2, Description = Gibberellin 2-beta-dioxygenase 2, PFAM = PF03171;PF14226)' T '17.6.1.13' 'hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase' 'niben101scf04316_296148-299331' '(q9sq80|g2ox1_pea : 449.0) Gibberellin 2-beta-dioxygenase 1 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 1) (Gibberellin 2-oxidase 1) (GA 2-oxidase 1) (Protein SLENDER) - Pisum sativum (Garden pea) & (at1g30040 : 382.0) Encodes a gibberellin 2-oxidase that acts on C-19 gibberellins. AtGA2OX2 expression is responsive to cytokinin and KNOX activities.; gibberellin 2-oxidase (GA2OX2); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 3 (TAIR:AT2G34555.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 258.0) no description available & (gnl|cdd|33294 : 150.0) no description available & (reliability: 764.0) & (original description: Putative GA2OX1, Description = Gibberellin 2-beta-dioxygenase 1, PFAM = PF03171;PF14226)' T '17.6.1.13' 'hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase' 'niben101scf04316_457259-462157' '(q9sq80|g2ox1_pea : 439.0) Gibberellin 2-beta-dioxygenase 1 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 1) (Gibberellin 2-oxidase 1) (GA 2-oxidase 1) (Protein SLENDER) - Pisum sativum (Garden pea) & (at1g30040 : 379.0) Encodes a gibberellin 2-oxidase that acts on C-19 gibberellins. AtGA2OX2 expression is responsive to cytokinin and KNOX activities.; gibberellin 2-oxidase (GA2OX2); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 3 (TAIR:AT2G34555.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 251.0) no description available & (gnl|cdd|33294 : 150.0) no description available & (reliability: 758.0) & (original description: Putative GA2OX1, Description = Gibberellin 2-beta-dioxygenase 1, PFAM = PF03171;PF14226)' T '17.6.1.13' 'hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase' 'niben101scf06412_385670-390809' '(q9xhm5|g2ox2_pea : 406.0) Gibberellin 2-beta-dioxygenase 2 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 2) (Gibberellin 2-oxidase 2) (GA 2-oxidase 2) - Pisum sativum (Garden pea) & (at1g02400 : 337.0) Encodes a gibberellin 2-oxidase that acts on C19 gibberellins but not C20 gibberellins.; gibberellin 2-oxidase 6 (GA2OX6); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 4 (TAIR:AT1G47990.1); Has 8143 Blast hits to 8109 proteins in 973 species: Archae - 0; Bacteria - 1087; Metazoa - 68; Fungi - 840; Plants - 4773; Viruses - 0; Other Eukaryotes - 1375 (source: NCBI BLink). & (gnl|cdd|35365 : 221.0) no description available & (gnl|cdd|33294 : 127.0) no description available & (reliability: 674.0) & (original description: Putative GA2OX2, Description = Gibberellin 2-beta-dioxygenase 2, PFAM = PF03171;PF14226)' T '17.6.1.13' 'hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase' 'niben101scf10232_223810-232734' '(q9xhm5|g2ox2_pea : 375.0) Gibberellin 2-beta-dioxygenase 2 (EC 1.14.11.13) (Gibberellin 2-beta-hydroxylase 2) (Gibberellin 2-oxidase 2) (GA 2-oxidase 2) - Pisum sativum (Garden pea) & (at1g02400 : 314.0) Encodes a gibberellin 2-oxidase that acts on C19 gibberellins but not C20 gibberellins.; gibberellin 2-oxidase 6 (GA2OX6); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 4 (TAIR:AT1G47990.1); Has 8143 Blast hits to 8109 proteins in 973 species: Archae - 0; Bacteria - 1087; Metazoa - 68; Fungi - 840; Plants - 4773; Viruses - 0; Other Eukaryotes - 1375 (source: NCBI BLink). & (gnl|cdd|35365 : 232.0) no description available & (gnl|cdd|33294 : 133.0) no description available & (reliability: 628.0) & (original description: Putative GA2OX4, Description = Gibberellin 2-beta-dioxygenase 4, PFAM = PF03171;PF14226)' T '17.6.1.1001' 'hormone metabolism.gibberelin.synthesis-degradation' 'gibberellate (ga3)' 'hormone metabolism.gibberelin' M '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'nbv0.3scaffold277_65479-69095' '(gnl|cdd|67150 : 206.0) no description available & (at1g66350 : 196.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8s4w7|gai1_vitvi : 184.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 392.0) & (original description: Putative GRAS2, Description = GRAS family protein, PFAM = PF03514)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'nbv0.3scaffold5200_44943-64712' '(q8s4w7|gai1_vitvi : 202.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g14920 : 189.0) Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA.; GIBBERELLIC ACID INSENSITIVE (GAI); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT2G01570.1); Has 2718 Blast hits to 2657 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2714; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative DELLA2, Description = DELLA protein 2, PFAM = PF03514)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'nbv0.3scaffold15044_36354-40012' '(q8s4w7|gai1_vitvi : 706.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g14920 : 625.0) Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA.; GIBBERELLIC ACID INSENSITIVE (GAI); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT2G01570.1); Has 2718 Blast hits to 2657 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2714; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 357.0) no description available & (reliability: 1250.0) & (original description: Putative GAI1, Description = DELLA protein GAI1, PFAM = PF03514;PF12041)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'nbv0.3scaffold26660_12320-17815' '(gnl|cdd|67150 : 330.0) no description available & (q8s4w7|gai1_vitvi : 309.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 299.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 598.0) & (original description: Putative ATA, Description = Transcription factor, PFAM = PF03514)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'nbv0.3scaffold61880_1373-11389' '(at3g63010 : 522.0) Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4.; GA INSENSITIVE DWARF1B (GID1B); FUNCTIONS IN: hydrolase activity; INVOLVED IN: floral organ morphogenesis, raffinose family oligosaccharide biosynthetic process, positive regulation of gibberellic acid mediated signaling pathway, response to gibberellin stimulus, gibberellin mediated signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G27320.1); Has 9567 Blast hits to 9549 proteins in 1556 species: Archae - 107; Bacteria - 5744; Metazoa - 546; Fungi - 719; Plants - 1351; Viruses - 5; Other Eukaryotes - 1095 (source: NCBI BLink). & (q6l545|gid1_orysa : 426.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (gnl|cdd|36728 : 294.0) no description available & (gnl|cdd|87389 : 189.0) no description available & (reliability: 1044.0) & (original description: Putative gid1, Description = Putative GID1 protein, PFAM = PF07859)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'nbv0.3scaffold96831_1405-4443' '(at3g63010 : 588.0) Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4.; GA INSENSITIVE DWARF1B (GID1B); FUNCTIONS IN: hydrolase activity; INVOLVED IN: floral organ morphogenesis, raffinose family oligosaccharide biosynthetic process, positive regulation of gibberellic acid mediated signaling pathway, response to gibberellin stimulus, gibberellin mediated signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G27320.1); Has 9567 Blast hits to 9549 proteins in 1556 species: Archae - 107; Bacteria - 5744; Metazoa - 546; Fungi - 719; Plants - 1351; Viruses - 5; Other Eukaryotes - 1095 (source: NCBI BLink). & (q6l545|gid1_orysa : 471.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (gnl|cdd|36728 : 326.0) no description available & (gnl|cdd|87389 : 197.0) no description available & (reliability: 1176.0) & (original description: Putative GID1B, Description = Gibberellin receptor GID1B, PFAM = PF07859)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'nbv0.3scaffold135547_1-1448' '(q84tq7|gai_goshi : 540.0) DELLA protein GAI (Gibberellic acid-insensitive mutant protein) (GhGAI) - Gossypium hirsutum (Upland cotton) & (at2g01570 : 486.0) Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.; REPRESSOR OF GA1-3 1 (RGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT1G14920.1); Has 2724 Blast hits to 2666 proteins in 317 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 4; Plants - 2709; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|67150 : 321.0) no description available & (reliability: 972.0) & (original description: Putative d8, Description = DELLA protein DWARF8, PFAM = PF03514;PF12041)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'nbv0.5scaffold26_43608-47488' '(gnl|cdd|67150 : 202.0) no description available & (at1g66350 : 176.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8s4w7|gai1_vitvi : 172.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 352.0) & (original description: Putative GRAS2, Description = GRAS family protein, PFAM = PF03514)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'nbv0.5scaffold76_1196935-1200892' '(q8s4w7|gai1_vitvi : 703.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at2g01570 : 626.0) Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.; REPRESSOR OF GA1-3 1 (RGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT1G14920.1); Has 2724 Blast hits to 2666 proteins in 317 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 4; Plants - 2709; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|67150 : 356.0) no description available & (reliability: 1252.0) & (original description: Putative GAI1, Description = DELLA protein GAI1, PFAM = PF03514;PF12041)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'nbv0.5scaffold2121_169234-179516' '(at3g63010 : 525.0) Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4.; GA INSENSITIVE DWARF1B (GID1B); FUNCTIONS IN: hydrolase activity; INVOLVED IN: floral organ morphogenesis, raffinose family oligosaccharide biosynthetic process, positive regulation of gibberellic acid mediated signaling pathway, response to gibberellin stimulus, gibberellin mediated signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G27320.1); Has 9567 Blast hits to 9549 proteins in 1556 species: Archae - 107; Bacteria - 5744; Metazoa - 546; Fungi - 719; Plants - 1351; Viruses - 5; Other Eukaryotes - 1095 (source: NCBI BLink). & (q6l545|gid1_orysa : 431.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (gnl|cdd|36728 : 294.0) no description available & (gnl|cdd|87389 : 190.0) no description available & (reliability: 1050.0) & (original description: Putative GID1C, Description = Gibberellin receptor GID1C, PFAM = PF07859)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'nbv0.5scaffold6266_9739-15234' '(gnl|cdd|67150 : 331.0) no description available & (q8s4w7|gai1_vitvi : 310.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 299.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 598.0) & (original description: Putative ATA, Description = Transcription factor, PFAM = PF03514)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben044scf00003256ctg021_1876-5440' '(gnl|cdd|67150 : 143.0) no description available & (q5ne24|nsp2_medtr : 107.0) Nodulation signaling pathway 2 protein - Medicago truncatula (Barrel medic) & (at5g17490 : 90.5) DELLA subfamily member involved in GA signal transduction; RGA-like protein 3 (RGL3); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative GRAS5, Description = GRAS5, PFAM = PF03514)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben044scf00010002ctg016_2629-6458' '(gnl|cdd|67150 : 257.0) no description available & (q8s4w7|gai1_vitvi : 254.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g14920 : 253.0) Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA.; GIBBERELLIC ACID INSENSITIVE (GAI); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT2G01570.1); Has 2718 Blast hits to 2657 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2714; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 494.0) & (original description: Putative GRAS32, Description = GRAS32 protein, PFAM = PF03514)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben044scf00010041ctg003_1496-5321' '(q8s4w7|gai1_vitvi : 717.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at2g01570 : 661.0) Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.; REPRESSOR OF GA1-3 1 (RGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT1G14920.1); Has 2724 Blast hits to 2666 proteins in 317 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 4; Plants - 2709; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|67150 : 352.0) no description available & (reliability: 1322.0) & (original description: Putative GAI, Description = DELLA protein GAI, PFAM = PF12041;PF03514)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben044scf00031891ctg004_32273-41477' '(o82039|spy_pethy : 812.0) Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-) (PhSPY) - Petunia hybrida (Petunia) & (at3g11540 : 687.0) Encodes a N-acetyl glucosamine transferase that may glycosylate other molecules involved in GA signaling. Contains a tetratricopeptide repeat region, and a novel carboxy-terminal region. SPY acts as both a repressor of GA responses and as a positive regulation of cytokinin signalling. SPY may be involved in reducing ROS accumulation in response to stress.; SPINDLY (SPY); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39826 : 536.0) no description available & (gnl|cdd|33700 : 301.0) no description available & (reliability: 1374.0) & (original description: Putative spyA, Description = Putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY, PFAM = PF13844;PF13844)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben044scf00047250ctg000_253-3566' '(at5g37490 : 341.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: CYS, MET, PRO, and GLY protein 1 (TAIR:AT1G66160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 109.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 91.1) no description available & (reliability: 682.0) & (original description: Putative PUB21, Description = U-box domain-containing protein 21, PFAM = PF04564)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben044scf00057436ctg000_7041-10651' '(gnl|cdd|67150 : 245.0) no description available & (q8s4w7|gai1_vitvi : 238.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 237.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 474.0) & (original description: Putative GRAS34, Description = GRAS34 protein, PFAM = PF03514)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf00100_64204-83573' '(at3g63010 : 554.0) Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4.; GA INSENSITIVE DWARF1B (GID1B); FUNCTIONS IN: hydrolase activity; INVOLVED IN: floral organ morphogenesis, raffinose family oligosaccharide biosynthetic process, positive regulation of gibberellic acid mediated signaling pathway, response to gibberellin stimulus, gibberellin mediated signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G27320.1); Has 9567 Blast hits to 9549 proteins in 1556 species: Archae - 107; Bacteria - 5744; Metazoa - 546; Fungi - 719; Plants - 1351; Viruses - 5; Other Eukaryotes - 1095 (source: NCBI BLink). & (q6l545|gid1_orysa : 442.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (gnl|cdd|36728 : 323.0) no description available & (gnl|cdd|87389 : 199.0) no description available & (reliability: 1108.0) & (original description: Putative GID1C, Description = Gibberellin receptor GID1C, PFAM = PF07859)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf00144_94458-114140' '(o82039|spy_pethy : 1712.0) Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-) (PhSPY) - Petunia hybrida (Petunia) & (at3g11540 : 1469.0) Encodes a N-acetyl glucosamine transferase that may glycosylate other molecules involved in GA signaling. Contains a tetratricopeptide repeat region, and a novel carboxy-terminal region. SPY acts as both a repressor of GA responses and as a positive regulation of cytokinin signalling. SPY may be involved in reducing ROS accumulation in response to stress.; SPINDLY (SPY); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39826 : 1070.0) no description available & (gnl|cdd|33700 : 313.0) no description available & (reliability: 2938.0) & (original description: Putative SPY, Description = Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY, PFAM = PF13374;PF13432;PF00515;PF00515;PF00515;PF00515;PF13844;PF13844)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf00247_264900-268516' '(at3g63010 : 591.0) Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4.; GA INSENSITIVE DWARF1B (GID1B); FUNCTIONS IN: hydrolase activity; INVOLVED IN: floral organ morphogenesis, raffinose family oligosaccharide biosynthetic process, positive regulation of gibberellic acid mediated signaling pathway, response to gibberellin stimulus, gibberellin mediated signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G27320.1); Has 9567 Blast hits to 9549 proteins in 1556 species: Archae - 107; Bacteria - 5744; Metazoa - 546; Fungi - 719; Plants - 1351; Viruses - 5; Other Eukaryotes - 1095 (source: NCBI BLink). & (q6l545|gid1_orysa : 461.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (gnl|cdd|36728 : 321.0) no description available & (gnl|cdd|87389 : 197.0) no description available & (reliability: 1182.0) & (original description: Putative GID1B, Description = Gibberellin receptor GID1B, PFAM = PF07859)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf00927_851350-854681' '(at5g37490 : 287.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: CYS, MET, PRO, and GLY protein 1 (TAIR:AT1G66160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 110.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 93.0) no description available & (reliability: 574.0) & (original description: Putative ACRE74, Description = Avr9/Cf-9 rapidly elicited protein 74, PFAM = PF04564)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf00984_936748-940082' '(at5g37490 : 267.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: CYS, MET, PRO, and GLY protein 1 (TAIR:AT1G66160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 112.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 91.5) no description available & (reliability: 534.0) & (original description: Putative CMPG, Description = CMPG, PFAM = PF04564)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf01221_596296-599615' '(gnl|cdd|67150 : 176.0) no description available & (at1g66350 : 130.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q6ei06|gaip_cucma : 121.0) DELLA protein GAIP (Gibberellic acid-insensitive phloem protein) (GAIP) (CmGAIP) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 260.0) & (original description: Putative GRAS41, Description = DELLA protein GAI1, putative, PFAM = PF03514)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf01221_596536-599639' '(gnl|cdd|67150 : 174.0) no description available & (at3g03450 : 101.0) Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.; RGA-like 2 (RGL2); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2697 Blast hits to 2637 proteins in 314 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2690; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q6ei06|gaip_cucma : 97.8) DELLA protein GAIP (Gibberellic acid-insensitive phloem protein) (GAIP) (CmGAIP) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 200.0) & (original description: Putative GRAS38, Description = GRAS family transcription factor, putative, PFAM = PF03514)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf01353_99074-102265' '(gnl|cdd|67150 : 229.0) no description available & (at3g03450 : 186.0) Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.; RGA-like 2 (RGL2); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2697 Blast hits to 2637 proteins in 314 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2690; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q8s4w7|gai1_vitvi : 176.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 364.0) & (original description: Putative GRAS2, Description = GRAS family transcription factor, PFAM = PF03514)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf01365_673693-677087' '(gnl|cdd|67150 : 239.0) no description available & (at2g04890 : 190.0) Encodes a scarecrow-like protein (SCL21). Member of GRAS gene family.; SCARECROW-like 21 (SCL21); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G48150.2); Has 2478 Blast hits to 2441 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2474; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8s4w7|gai1_vitvi : 187.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 354.0) & (original description: Putative glysoja_024156, Description = DELLA protein GAI, PFAM = PF03514)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf01626_526854-530521' '(at5g27320 : 545.0) Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4.; GA INSENSITIVE DWARF1C (GID1C); FUNCTIONS IN: hydrolase activity; INVOLVED IN: floral organ morphogenesis, raffinose family oligosaccharide biosynthetic process, positive regulation of gibberellic acid mediated signaling pathway, response to gibberellin stimulus, gibberellin mediated signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6l545|gid1_orysa : 434.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (gnl|cdd|36728 : 326.0) no description available & (gnl|cdd|87389 : 196.0) no description available & (reliability: 1090.0) & (original description: Putative GID1C, Description = Gibberellin receptor GID1C, PFAM = PF07859)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf01795_907057-910370' '(at5g37490 : 367.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: CYS, MET, PRO, and GLY protein 1 (TAIR:AT1G66160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 118.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 91.8) no description available & (reliability: 734.0) & (original description: Putative PUB21, Description = U-box domain-containing protein 21, PFAM = PF04564)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf02111_1694588-1698204' '(gnl|cdd|67150 : 207.0) no description available & (at3g03450 : 197.0) Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.; RGA-like 2 (RGL2); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2697 Blast hits to 2637 proteins in 314 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2690; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q8s4w7|gai1_vitvi : 184.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 392.0) & (original description: Putative GRAS41, Description = GRAS41 protein, PFAM = PF03514)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf02188_304608-310101' '(gnl|cdd|67150 : 327.0) no description available & (q8s4w7|gai1_vitvi : 300.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 295.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 590.0) & (original description: Putative ATA, Description = Transcription factor, PFAM = PF03514)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf02612_8996-12797' '(q8s4w7|gai1_vitvi : 697.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at2g01570 : 643.0) Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.; REPRESSOR OF GA1-3 1 (RGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT1G14920.1); Has 2724 Blast hits to 2666 proteins in 317 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 4; Plants - 2709; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|67150 : 323.0) no description available & (reliability: 1286.0) & (original description: Putative GAI, Description = DELLA protein GAI, PFAM = PF12041;PF03514)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf03202_1307706-1345029' '(gnl|cdd|67150 : 145.0) no description available & (q5ne24|nsp2_medtr : 105.0) Nodulation signaling pathway 2 protein - Medicago truncatula (Barrel medic) & (at5g17490 : 90.5) DELLA subfamily member involved in GA signal transduction; RGA-like protein 3 (RGL3); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative GRAS5, Description = GRAS5, PFAM = PF03514)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf03240_49836-55165' '(q8s4w7|gai1_vitvi : 384.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at3g03450 : 360.0) Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.; RGA-like 2 (RGL2); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2697 Blast hits to 2637 proteins in 314 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2690; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|67150 : 256.0) no description available & (reliability: 710.0) & (original description: Putative RGL, Description = ELLA domain GRAS family transcription factor, PFAM = PF03514)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf03473_87067-90529' '(gnl|cdd|67150 : 238.0) no description available & (q8s4w7|gai1_vitvi : 187.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at5g48150 : 185.0) Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway.; phytochrome a signal transduction 1 (PAT1); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 21 (TAIR:AT2G04890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative glysoja_024156, Description = DELLA protein GAI, PFAM = PF03514)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf04819_437888-441625' '(gnl|cdd|67150 : 220.0) no description available & (q8s4w7|gai1_vitvi : 175.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 169.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative GRAS2, Description = GRAS family protein, PFAM = PF03514)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf05301_247452-251065' '(at3g63010 : 584.0) Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4.; GA INSENSITIVE DWARF1B (GID1B); FUNCTIONS IN: hydrolase activity; INVOLVED IN: floral organ morphogenesis, raffinose family oligosaccharide biosynthetic process, positive regulation of gibberellic acid mediated signaling pathway, response to gibberellin stimulus, gibberellin mediated signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G27320.1); Has 9567 Blast hits to 9549 proteins in 1556 species: Archae - 107; Bacteria - 5744; Metazoa - 546; Fungi - 719; Plants - 1351; Viruses - 5; Other Eukaryotes - 1095 (source: NCBI BLink). & (q6l545|gid1_orysa : 466.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (gnl|cdd|36728 : 323.0) no description available & (gnl|cdd|87389 : 195.0) no description available & (reliability: 1168.0) & (original description: Putative GID1B, Description = Gibberellin receptor GID1B, PFAM = PF07859)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf07850_804306-832346' '(o82039|spy_pethy : 1689.0) Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-) (PhSPY) - Petunia hybrida (Petunia) & (at3g11540 : 1466.0) Encodes a N-acetyl glucosamine transferase that may glycosylate other molecules involved in GA signaling. Contains a tetratricopeptide repeat region, and a novel carboxy-terminal region. SPY acts as both a repressor of GA responses and as a positive regulation of cytokinin signalling. SPY may be involved in reducing ROS accumulation in response to stress.; SPINDLY (SPY); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39826 : 1068.0) no description available & (gnl|cdd|33700 : 315.0) no description available & (reliability: 2932.0) & (original description: Putative SPY, Description = Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY, PFAM = PF13374;PF13844;PF13844;PF00515;PF00515;PF00515;PF00515)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf07850_810711-813346' '(o82039|spy_pethy : 216.0) Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-) (PhSPY) - Petunia hybrida (Petunia) & (at3g11540 : 199.0) Encodes a N-acetyl glucosamine transferase that may glycosylate other molecules involved in GA signaling. Contains a tetratricopeptide repeat region, and a novel carboxy-terminal region. SPY acts as both a repressor of GA responses and as a positive regulation of cytokinin signalling. SPY may be involved in reducing ROS accumulation in response to stress.; SPINDLY (SPY); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39826 : 172.0) no description available & (gnl|cdd|33700 : 87.0) no description available & (reliability: 398.0) & (original description: Putative OGT1, Description = Putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY, PFAM = PF13844)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf08855_264814-268163' '(at5g37490 : 304.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: CYS, MET, PRO, and GLY protein 1 (TAIR:AT1G66160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 130.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 89.1) no description available & (reliability: 608.0) & (original description: Putative PUB21, Description = U-box domain-containing protein 21, PFAM = PF04564)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf11723_265857-269459' '(at3g63010 : 582.0) Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4.; GA INSENSITIVE DWARF1B (GID1B); FUNCTIONS IN: hydrolase activity; INVOLVED IN: floral organ morphogenesis, raffinose family oligosaccharide biosynthetic process, positive regulation of gibberellic acid mediated signaling pathway, response to gibberellin stimulus, gibberellin mediated signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G27320.1); Has 9567 Blast hits to 9549 proteins in 1556 species: Archae - 107; Bacteria - 5744; Metazoa - 546; Fungi - 719; Plants - 1351; Viruses - 5; Other Eukaryotes - 1095 (source: NCBI BLink). & (q6l545|gid1_orysa : 459.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (gnl|cdd|36728 : 316.0) no description available & (gnl|cdd|87389 : 194.0) no description available & (reliability: 1164.0) & (original description: Putative GID1B, Description = Gibberellin receptor GID1B, PFAM = PF07859)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf15120_90709-94468' '(q8s4w7|gai1_vitvi : 717.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at2g01570 : 635.0) Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.; REPRESSOR OF GA1-3 1 (RGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT1G14920.1); Has 2724 Blast hits to 2666 proteins in 317 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 4; Plants - 2709; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|67150 : 357.0) no description available & (reliability: 1270.0) & (original description: Putative GAI1, Description = DELLA protein GAI1, PFAM = PF03514;PF12041)' T '17.6.2' 'hormone metabolism.gibberelin.signal transduction' 'niben101scf15156_91141-94812' '(at5g27320 : 539.0) Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4.; GA INSENSITIVE DWARF1C (GID1C); FUNCTIONS IN: hydrolase activity; INVOLVED IN: floral organ morphogenesis, raffinose family oligosaccharide biosynthetic process, positive regulation of gibberellic acid mediated signaling pathway, response to gibberellin stimulus, gibberellin mediated signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6l545|gid1_orysa : 435.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (gnl|cdd|36728 : 328.0) no description available & (gnl|cdd|87389 : 199.0) no description available & (reliability: 1078.0) & (original description: Putative GID1C, Description = Gibberellin receptor GID1C, PFAM = PF07859)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'nbv0.3scaffold5200_44943-64712' '(q8s4w7|gai1_vitvi : 202.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g14920 : 189.0) Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA.; GIBBERELLIC ACID INSENSITIVE (GAI); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT2G01570.1); Has 2718 Blast hits to 2657 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2714; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative DELLA2, Description = DELLA protein 2, PFAM = PF03514)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'nbv0.3scaffold15044_36354-40012' '(q8s4w7|gai1_vitvi : 706.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g14920 : 625.0) Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA.; GIBBERELLIC ACID INSENSITIVE (GAI); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT2G01570.1); Has 2718 Blast hits to 2657 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2714; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 357.0) no description available & (reliability: 1250.0) & (original description: Putative GAI1, Description = DELLA protein GAI1, PFAM = PF03514;PF12041)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'nbv0.3scaffold26660_12320-17815' '(gnl|cdd|67150 : 330.0) no description available & (q8s4w7|gai1_vitvi : 309.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 299.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative ATA, Description = Transcription factor, PFAM = PF03514)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'nbv0.3scaffold50127_12169-15132' '(gnl|cdd|66395 : 94.7) no description available & (at1g74670 : 83.2) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: GAST1 protein homolog 4 (TAIR:AT5G15230.1); Has 479 Blast hits to 479 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative gip4, Description = Gip1-like protein, PFAM = PF02704)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'nbv0.3scaffold101147_694-3898' '(gnl|cdd|66395 : 100.0) no description available & (at1g74670 : 96.3) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: GAST1 protein homolog 4 (TAIR:AT5G15230.1); Has 479 Blast hits to 479 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative GASA4, Description = Gibberellin-regulated protein 4, PFAM = PF02704)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'nbv0.3scaffold135547_1-1448' '(q84tq7|gai_goshi : 540.0) DELLA protein GAI (Gibberellic acid-insensitive mutant protein) (GhGAI) - Gossypium hirsutum (Upland cotton) & (at2g01570 : 486.0) Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.; REPRESSOR OF GA1-3 1 (RGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT1G14920.1); Has 2724 Blast hits to 2666 proteins in 317 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 4; Plants - 2709; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|67150 : 321.0) no description available & (reliability: 964.0) & (original description: Putative d8, Description = DELLA protein DWARF8, PFAM = PF03514;PF12041)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'nbv0.5scaffold26_43608-47488' '(gnl|cdd|67150 : 202.0) no description available & (at1g66350 : 176.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8s4w7|gai1_vitvi : 172.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 336.0) & (original description: Putative GRAS2, Description = GRAS family protein, PFAM = PF03514)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'nbv0.5scaffold76_1196935-1200892' '(q8s4w7|gai1_vitvi : 703.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at2g01570 : 626.0) Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.; REPRESSOR OF GA1-3 1 (RGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT1G14920.1); Has 2724 Blast hits to 2666 proteins in 317 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 4; Plants - 2709; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|67150 : 356.0) no description available & (reliability: 1240.0) & (original description: Putative GAI1, Description = DELLA protein GAI1, PFAM = PF03514;PF12041)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'nbv0.5scaffold6266_9739-15234' '(gnl|cdd|67150 : 331.0) no description available & (q8s4w7|gai1_vitvi : 310.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 299.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 562.0) & (original description: Putative ATA, Description = Transcription factor, PFAM = PF03514)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'nbv0.5scaffold9401_16415-19368' '(at4g14465 : 158.0) AT-hook motif nuclear-localized protein 20 (AHL20); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 19 (TAIR:AT3G04570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 137.0) no description available & (reliability: 310.0) & (original description: Putative AHL15, Description = AT-hook motif nuclear-localized protein 15, PFAM = PF03479)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'nbv0.5scaffold11244_622-3906' '(gnl|cdd|66395 : 103.0) no description available & (at1g74670 : 100.0) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: GAST1 protein homolog 4 (TAIR:AT5G15230.1); Has 479 Blast hits to 479 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative GASA6, Description = Gibberellin-regulated protein 6, PFAM = PF02704)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben044scf00004662ctg016_921-3968' '(gnl|cdd|66395 : 102.0) no description available & (at1g74670 : 100.0) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: GAST1 protein homolog 4 (TAIR:AT5G15230.1); Has 479 Blast hits to 479 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative GASA6, Description = Gibberellin-regulated protein 6, PFAM = PF02704)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben044scf00010002ctg016_2629-6458' '(gnl|cdd|67150 : 257.0) no description available & (q8s4w7|gai1_vitvi : 254.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g14920 : 253.0) Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA.; GIBBERELLIC ACID INSENSITIVE (GAI); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT2G01570.1); Has 2718 Blast hits to 2657 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2714; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative GRAS32, Description = GRAS32 protein, PFAM = PF03514)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben044scf00010041ctg003_1496-5321' '(q8s4w7|gai1_vitvi : 717.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at2g01570 : 661.0) Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.; REPRESSOR OF GA1-3 1 (RGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT1G14920.1); Has 2724 Blast hits to 2666 proteins in 317 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 4; Plants - 2709; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|67150 : 352.0) no description available & (reliability: 1318.0) & (original description: Putative GAI, Description = DELLA protein GAI, PFAM = PF12041;PF03514)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben044scf00012486ctg021_14907-18388' '(gnl|cdd|66395 : 92.0) no description available & (at1g22690 : 85.9) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to gibberellin stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: Gibberellin-regulated family protein (TAIR:AT2G18420.1). & (reliability: 171.8) & (original description: Putative GASA9, Description = Gibberellin-regulated protein 9, PFAM = PF02704)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben044scf00019582ctg002_15716-18767' '(at5g14920 : 82.8) Gibberellin-regulated family protein; INVOLVED IN: response to gibberellin stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 177972 Blast hits to 67014 proteins in 2759 species: Archae - 778; Bacteria - 39574; Metazoa - 64340; Fungi - 23851; Plants - 18819; Viruses - 6445; Other Eukaryotes - 24165 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative geg, Description = Gibberellin-regulated family protein, PFAM = PF02704)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben044scf00026717ctg010_4434-9082' '(at5g14920 : 87.0) Gibberellin-regulated family protein; INVOLVED IN: response to gibberellin stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 177972 Blast hits to 67014 proteins in 2759 species: Archae - 778; Bacteria - 39574; Metazoa - 64340; Fungi - 23851; Plants - 18819; Viruses - 6445; Other Eukaryotes - 24165 (source: NCBI BLink). & (gnl|cdd|66395 : 83.5) no description available & (reliability: 174.0) & (original description: Putative geg, Description = Gibberellin-regulated family protein, PFAM = PF02704)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben044scf00036535ctg001_17309-20958' '(gnl|cdd|66395 : 104.0) no description available & (at1g74670 : 96.3) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: GAST1 protein homolog 4 (TAIR:AT5G15230.1); Has 479 Blast hits to 479 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative gip5, Description = Gip1-like protein, PFAM = PF02704)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf00135_17253-20794' '(gnl|cdd|66395 : 94.3) no description available & (at1g22690 : 82.8) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to gibberellin stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: Gibberellin-regulated family protein (TAIR:AT2G18420.1). & (reliability: 165.6) & (original description: Putative SN2, Description = Snakin-2, PFAM = PF02704)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf00142_152293-155246' '(at4g14465 : 183.0) AT-hook motif nuclear-localized protein 20 (AHL20); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 19 (TAIR:AT3G04570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 134.0) no description available & (reliability: 364.0) & (original description: Putative AHL15, Description = AT-hook motif nuclear-localized protein 15, PFAM = PF03479)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf00146_14513-19161' '(at5g14920 : 89.0) Gibberellin-regulated family protein; INVOLVED IN: response to gibberellin stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 177972 Blast hits to 67014 proteins in 2759 species: Archae - 778; Bacteria - 39574; Metazoa - 64340; Fungi - 23851; Plants - 18819; Viruses - 6445; Other Eukaryotes - 24165 (source: NCBI BLink). & (gnl|cdd|66395 : 85.1) no description available & (reliability: 178.0) & (original description: Putative geg, Description = Gibberellin-regulated family protein, PFAM = PF02704)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf01353_99074-102265' '(gnl|cdd|67150 : 229.0) no description available & (at3g03450 : 186.0) Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.; RGA-like 2 (RGL2); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2697 Blast hits to 2637 proteins in 314 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2690; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q8s4w7|gai1_vitvi : 176.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 344.0) & (original description: Putative GRAS2, Description = GRAS family transcription factor, PFAM = PF03514)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf01578_23579-27044' '(gnl|cdd|66395 : 103.0) no description available & (at1g74670 : 95.1) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: GAST1 protein homolog 4 (TAIR:AT5G15230.1); Has 479 Blast hits to 479 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative GASA6, Description = Gibberellin-regulated protein 6, PFAM = PF02704)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf01634_88536-102703' '(gnl|cdd|66395 : 89.7) no description available & (at1g74670 : 80.5) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: GAST1 protein homolog 4 (TAIR:AT5G15230.1); Has 479 Blast hits to 479 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative gip1, Description = Gibberellin-regulated family protein, PFAM = PF02704)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf01702_331568-334240' '(gnl|cdd|66395 : 93.9) no description available & (at1g75750 : 88.2) GA-responsive GAST1 protein homolog regulated by BR and GA antagonistically. Possibly involved in cell elongation based on expression data; GAST1 protein homolog 1 (GASA1); CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: Gibberellin-regulated family protein (TAIR:AT2G18420.1). & (reliability: 176.4) & (original description: Putative GASA, Description = GA-stimulated protein, PFAM = PF02704)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf01799_12930-15922' '(gnl|cdd|66395 : 85.1) no description available & (at1g74670 : 81.3) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: GAST1 protein homolog 4 (TAIR:AT5G15230.1); Has 479 Blast hits to 479 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative gip1, Description = Gibberellin-regulated family protein, PFAM = PF02704)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf01847_102367-105637' '(gnl|cdd|66395 : 93.1) no description available & (at1g22690 : 80.5) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to gibberellin stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: Gibberellin-regulated family protein (TAIR:AT2G18420.1). & (reliability: 161.0) & (original description: Putative SN2, Description = Snakin-2, PFAM = PF02704)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf02188_304608-310101' '(gnl|cdd|67150 : 327.0) no description available & (q8s4w7|gai1_vitvi : 300.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 295.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 550.0) & (original description: Putative ATA, Description = Transcription factor, PFAM = PF03514)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf02612_8996-12797' '(q8s4w7|gai1_vitvi : 697.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at2g01570 : 643.0) Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.; REPRESSOR OF GA1-3 1 (RGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT1G14920.1); Has 2724 Blast hits to 2666 proteins in 317 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 4; Plants - 2709; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|67150 : 323.0) no description available & (reliability: 1282.0) & (original description: Putative GAI, Description = DELLA protein GAI, PFAM = PF12041;PF03514)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf03240_49836-55165' '(q8s4w7|gai1_vitvi : 384.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at3g03450 : 360.0) Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.; RGA-like 2 (RGL2); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2697 Blast hits to 2637 proteins in 314 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2690; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|67150 : 256.0) no description available & (reliability: 698.0) & (original description: Putative RGL, Description = ELLA domain GRAS family transcription factor, PFAM = PF03514)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf03944_673424-676377' '(at3g55560 : 161.0) AT-hook protein of GA feedback 2 (AGF2); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 20 (TAIR:AT4G14465.1); Has 804 Blast hits to 798 proteins in 45 species: Archae - 0; Bacteria - 14; Metazoa - 18; Fungi - 6; Plants - 758; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|86345 : 137.0) no description available & (reliability: 322.0) & (original description: Putative AHL15, Description = AT-hook motif nuclear-localized protein 15, PFAM = PF03479)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf04411_325930-330380' '(at1g74670 : 89.4) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: GAST1 protein homolog 4 (TAIR:AT5G15230.1); Has 479 Blast hits to 479 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66395 : 88.1) no description available & (reliability: 178.8) & (original description: Putative gip1, Description = Gibberellin-regulated family protein, PFAM = PF02704)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf04495_41289-44238' '(gnl|cdd|66395 : 103.0) no description available & (at1g74670 : 88.2) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: GAST1 protein homolog 4 (TAIR:AT5G15230.1); Has 479 Blast hits to 479 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative gip1, Description = Gibberellin-induced protein 1, PFAM = PF02704)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf04819_437888-441625' '(gnl|cdd|67150 : 220.0) no description available & (q8s4w7|gai1_vitvi : 175.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 169.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative GRAS2, Description = GRAS family protein, PFAM = PF03514)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf06249_46552-50072' '(at1g74670 : 120.0) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: GAST1 protein homolog 4 (TAIR:AT5G15230.1); Has 479 Blast hits to 479 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66395 : 95.8) no description available & (reliability: 240.0) & (original description: Putative gip5, Description = Gip1-like protein, PFAM = PF02704)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf09092_274774-278563' '(gnl|cdd|66395 : 93.9) no description available & (at1g22690 : 80.9) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to gibberellin stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: Gibberellin-regulated family protein (TAIR:AT2G18420.1). & (reliability: 161.8) & (original description: Putative GASA9, Description = Gibberellin-regulated protein 9, PFAM = PF02704)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf11251_116717-119269' '(at5g15230 : 114.0) gibberellin-regulated (GASA4); GAST1 protein homolog 4 (GASA4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to gibberellin stimulus, gibberellic acid mediated signaling pathway; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: Gibberellin-regulated family protein (TAIR:AT1G74670.1); Has 474 Blast hits to 474 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 474; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66395 : 93.5) no description available & (reliability: 228.0) & (original description: Putative gip4, Description = Gip1-like protein, PFAM = PF02704)' T '17.6.3' 'hormone metabolism.gibberelin.induced-regulated-responsive-activated' 'niben101scf15120_90709-94468' '(q8s4w7|gai1_vitvi : 717.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at2g01570 : 635.0) Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.; REPRESSOR OF GA1-3 1 (RGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT1G14920.1); Has 2724 Blast hits to 2666 proteins in 317 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 4; Plants - 2709; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|67150 : 357.0) no description available & (reliability: 1262.0) & (original description: Putative GAI1, Description = DELLA protein GAI1, PFAM = PF03514;PF12041)' T '17.7' 'hormone metabolism.jasmonate' '' '' '17.7.1' 'hormone metabolism.jasmonate.synthesis-degradation' 'nbv0.3scaffold17972_21210-36005' '(at4g36910 : 212.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|73086 : 83.6) no description available & (reliability: 408.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571;PF00571)' T '17.7.1' 'hormone metabolism.jasmonate.synthesis-degradation' 'nbv0.5scaffold414_274001-348509' '(at4g36910 : 247.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|84873 : 98.1) no description available & (reliability: 476.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571;PF00571)' T '17.7.1' 'hormone metabolism.jasmonate.synthesis-degradation' 'nbv0.5scaffold3352_205636-222897' '(at4g36910 : 238.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|73134 : 92.6) no description available & (reliability: 442.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571;PF00571)' T '17.7.1' 'hormone metabolism.jasmonate.synthesis-degradation' 'niben044scf00002391ctg020_4737-9976' '(at4g36910 : 142.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571)' T '17.7.1' 'hormone metabolism.jasmonate.synthesis-degradation' 'niben101scf00280_163898-178605' '(at4g36910 : 286.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|73086 : 103.0) no description available & (reliability: 518.0) & (original description: Putative CBSX1, Description = CBS domain-containing protein CBSX1, chloroplastic, PFAM = PF00571;PF00571)' T '17.7.1' 'hormone metabolism.jasmonate.synthesis-degradation' 'niben101scf03009_520724-532775' '(at4g36910 : 276.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|73086 : 102.0) no description available & (reliability: 516.0) & (original description: Putative CBSX1, Description = CBS domain-containing protein CBSX1, chloroplastic, PFAM = PF00571;PF00571)' T '17.7.1' 'hormone metabolism.jasmonate.synthesis-degradation' 'niben101scf05135_667791-711776' '(at4g36910 : 261.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|73134 : 99.6) no description available & (reliability: 492.0) & (original description: Putative CBSX1, Description = CBS domain-containing protein CBSX1, chloroplastic, PFAM = PF00571;PF00571)' T '17.7.1' 'hormone metabolism.jasmonate.synthesis-degradation' 'niben101scf05135_693850-714143' '(at4g36910 : 222.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|84873 : 83.4) no description available & (reliability: 414.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571;PF00571)' T '17.7.1' 'hormone metabolism.jasmonate.synthesis-degradation' 'niben101scf06344_101468-112720' '(at4g36910 : 254.0) Has a cystathionine Beta-synthase domain.; LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G34120.1); Has 8411 Blast hits to 7757 proteins in 1885 species: Archae - 1245; Bacteria - 5956; Metazoa - 278; Fungi - 143; Plants - 147; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink). & (gnl|cdd|73086 : 96.4) no description available & (reliability: 504.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571;PF00571)' T '17.7.1' 'hormone metabolism.jasmonate.synthesis-degradation' 'niben101scf12919_49053-57883' '(at4g34120 : 253.0) LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 1 (LEJ1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G36910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73086 : 97.5) no description available & (reliability: 506.0) & (original description: Putative LEJ2, Description = Putative CBS domain containing protein, PFAM = PF00571;PF00571)' T '17.7.1.1' 'hormone metabolism.jasmonate.synthesis-degradation.lipases' 'niben044scf00002678ctg018_176-3075' '(at2g44810 : 455.0) Mutant has defects in anther dehiscence, pollen maturation, and flower opening. The DAD1 protein is a chloroplastic phospholipase A1 that catalyzes the initial step of jasmonic acid biosynthesis.; DEFECTIVE ANTHER DEHISCENCE 1 (DAD1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G16820.1); Has 1715 Blast hits to 1709 proteins in 324 species: Archae - 0; Bacteria - 331; Metazoa - 67; Fungi - 376; Plants - 633; Viruses - 9; Other Eukaryotes - 299 (source: NCBI BLink). & (gnl|cdd|39769 : 171.0) no description available & (gnl|cdd|73213 : 134.0) no description available & (reliability: 910.0) & (original description: Putative DAD1, Description = Phospholipase A(1) DAD1, chloroplastic, PFAM = PF01764)' T '17.7.1.1' 'hormone metabolism.jasmonate.synthesis-degradation.lipases' 'niben101scf01188_916116-919423' '(at2g44810 : 436.0) Mutant has defects in anther dehiscence, pollen maturation, and flower opening. The DAD1 protein is a chloroplastic phospholipase A1 that catalyzes the initial step of jasmonic acid biosynthesis.; DEFECTIVE ANTHER DEHISCENCE 1 (DAD1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G16820.1); Has 1715 Blast hits to 1709 proteins in 324 species: Archae - 0; Bacteria - 331; Metazoa - 67; Fungi - 376; Plants - 633; Viruses - 9; Other Eukaryotes - 299 (source: NCBI BLink). & (gnl|cdd|39769 : 176.0) no description available & (gnl|cdd|73213 : 128.0) no description available & (reliability: 872.0) & (original description: Putative DAD1, Description = Phospholipase A(1) DAD1, chloroplastic, PFAM = PF01764)' T '17.7.1.1' 'hormone metabolism.jasmonate.synthesis-degradation.lipases' 'niben101scf02386_66443-121581' '(at2g44810 : 441.0) Mutant has defects in anther dehiscence, pollen maturation, and flower opening. The DAD1 protein is a chloroplastic phospholipase A1 that catalyzes the initial step of jasmonic acid biosynthesis.; DEFECTIVE ANTHER DEHISCENCE 1 (DAD1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G16820.1); Has 1715 Blast hits to 1709 proteins in 324 species: Archae - 0; Bacteria - 331; Metazoa - 67; Fungi - 376; Plants - 633; Viruses - 9; Other Eukaryotes - 299 (source: NCBI BLink). & (gnl|cdd|39769 : 179.0) no description available & (gnl|cdd|73213 : 131.0) no description available & (reliability: 882.0) & (original description: Putative DAD1F, Description = Defective in anther dehiscence 1, PFAM = PF01764)' T '17.7.1.1' 'hormone metabolism.jasmonate.synthesis-degradation.lipases' 'niben101scf02386_118499-121806' '(at2g44810 : 440.0) Mutant has defects in anther dehiscence, pollen maturation, and flower opening. The DAD1 protein is a chloroplastic phospholipase A1 that catalyzes the initial step of jasmonic acid biosynthesis.; DEFECTIVE ANTHER DEHISCENCE 1 (DAD1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G16820.1); Has 1715 Blast hits to 1709 proteins in 324 species: Archae - 0; Bacteria - 331; Metazoa - 67; Fungi - 376; Plants - 633; Viruses - 9; Other Eukaryotes - 299 (source: NCBI BLink). & (gnl|cdd|39769 : 177.0) no description available & (gnl|cdd|73213 : 129.0) no description available & (reliability: 880.0) & (original description: Putative Os11g0146600, Description = Lipase family protein, PFAM = PF01764)' T '17.7.1.1' 'hormone metabolism.jasmonate.synthesis-degradation.lipases' 'niben101scf02400_304500-307588' '(at2g44810 : 423.0) Mutant has defects in anther dehiscence, pollen maturation, and flower opening. The DAD1 protein is a chloroplastic phospholipase A1 that catalyzes the initial step of jasmonic acid biosynthesis.; DEFECTIVE ANTHER DEHISCENCE 1 (DAD1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G16820.1); Has 1715 Blast hits to 1709 proteins in 324 species: Archae - 0; Bacteria - 331; Metazoa - 67; Fungi - 376; Plants - 633; Viruses - 9; Other Eukaryotes - 299 (source: NCBI BLink). & (gnl|cdd|39769 : 178.0) no description available & (gnl|cdd|73213 : 135.0) no description available & (reliability: 846.0) & (original description: Putative DAD1F, Description = Defective in anther dehiscence 1, PFAM = PF01764)' T '17.7.1.1' 'hormone metabolism.jasmonate.synthesis-degradation.lipases' 'niben101scf05795_30454-33845' '(at2g44810 : 419.0) Mutant has defects in anther dehiscence, pollen maturation, and flower opening. The DAD1 protein is a chloroplastic phospholipase A1 that catalyzes the initial step of jasmonic acid biosynthesis.; DEFECTIVE ANTHER DEHISCENCE 1 (DAD1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G16820.1); Has 1715 Blast hits to 1709 proteins in 324 species: Archae - 0; Bacteria - 331; Metazoa - 67; Fungi - 376; Plants - 633; Viruses - 9; Other Eukaryotes - 299 (source: NCBI BLink). & (gnl|cdd|39769 : 156.0) no description available & (gnl|cdd|73213 : 126.0) no description available & (reliability: 838.0) & (original description: Putative DAD1, Description = Phospholipase A(1) DAD1, chloroplastic, PFAM = PF01764)' T '17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben044scf00001604ctg001_1-6153' '(at3g22400 : 1233.0) LOX5; FUNCTIONS IN: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding; INVOLVED IN: root development; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, LH2 (InterPro:IPR001024), Lipoxygenase, iron binding site (InterPro:IPR020833), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: lipoxygenase 1 (TAIR:AT1G55020.1); Has 1471 Blast hits to 1435 proteins in 177 species: Archae - 0; Bacteria - 82; Metazoa - 527; Fungi - 46; Plants - 787; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (p37831|lox1_soltu : 1199.0) Lipoxygenase 1 (EC 1.13.11.12) - Solanum tuberosum (Potato) & (gnl|cdd|84680 : 1015.0) no description available & (reliability: 2466.0) & (original description: Putative lox1, Description = Lipoxygenase, PFAM = PF01477;PF00305)' T '17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben044scf00008988ctg002_389-2804' '(at3g45140 : 186.0) Chloroplast lipoxygenase required for wound-induced jasmonic acid accumulation in Arabidopsis.Mutants are resistant to Staphylococcus aureus and accumulate salicylic acid upon infection.; lipoxygenase 2 (LOX2); FUNCTIONS IN: lipoxygenase activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT1G67560.1); Has 1459 Blast hits to 1423 proteins in 177 species: Archae - 0; Bacteria - 74; Metazoa - 524; Fungi - 48; Plants - 784; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (q8gsm2|lox23_horvu : 181.0) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12) (LOX2:Hv:3) - Hordeum vulgare (Barley) & (gnl|cdd|84680 : 143.0) no description available & (reliability: 372.0) & (original description: Putative lox, Description = Lipoxygenase, PFAM = PF00305)' T '17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben101scf01073_102352-113250' '(at1g67560 : 1092.0) PLAT/LH2 domain-containing lipoxygenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding; INVOLVED IN: oxidation reduction, growth; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT1G72520.1); Has 1467 Blast hits to 1431 proteins in 179 species: Archae - 0; Bacteria - 76; Metazoa - 533; Fungi - 48; Plants - 781; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (q8h016|lox6_orysa : 916.0) Probable lipoxygenase 6 (EC 1.13.11.12) - Oryza sativa (Rice) & (gnl|cdd|84680 : 796.0) no description available & (reliability: 2184.0) & (original description: Putative lox2, Description = Lipoxygenase, PFAM = PF00305;PF01477)' T '17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben101scf01375_912253-917492' '(p37831|lox1_soltu : 1031.0) Lipoxygenase 1 (EC 1.13.11.12) - Solanum tuberosum (Potato) & (at1g55020 : 971.0) lipoxygenase, a defense gene conferring resistance Xanthomonas campestris; lipoxygenase 1 (LOX1); CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT3G22400.1); Has 1484 Blast hits to 1444 proteins in 180 species: Archae - 0; Bacteria - 84; Metazoa - 533; Fungi - 49; Plants - 793; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|84680 : 955.0) no description available & (reliability: 1942.0) & (original description: Putative lox, Description = Lipoxygenase, PFAM = PF00305;PF00305;PF01477)' T '17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben101scf01434_343249-354375' '(p37831|lox1_soltu : 1401.0) Lipoxygenase 1 (EC 1.13.11.12) - Solanum tuberosum (Potato) & (at1g55020 : 1220.0) lipoxygenase, a defense gene conferring resistance Xanthomonas campestris; lipoxygenase 1 (LOX1); CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT3G22400.1); Has 1484 Blast hits to 1444 proteins in 180 species: Archae - 0; Bacteria - 84; Metazoa - 533; Fungi - 49; Plants - 793; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|84680 : 1061.0) no description available & (reliability: 2440.0) & (original description: Putative lox, Description = Lipoxygenase, PFAM = PF00305;PF01477)' T '17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben101scf01434_355326-361137' '(p37831|lox1_soltu : 1148.0) Lipoxygenase 1 (EC 1.13.11.12) - Solanum tuberosum (Potato) & (at1g55020 : 1075.0) lipoxygenase, a defense gene conferring resistance Xanthomonas campestris; lipoxygenase 1 (LOX1); CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT3G22400.1); Has 1484 Blast hits to 1444 proteins in 180 species: Archae - 0; Bacteria - 84; Metazoa - 533; Fungi - 49; Plants - 793; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|84680 : 1010.0) no description available & (reliability: 2150.0) & (original description: Putative lox, Description = Lipoxygenase, PFAM = PF01477;PF00305)' T '17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben101scf01434_368604-374485' '(p37831|lox1_soltu : 1202.0) Lipoxygenase 1 (EC 1.13.11.12) - Solanum tuberosum (Potato) & (at1g55020 : 1134.0) lipoxygenase, a defense gene conferring resistance Xanthomonas campestris; lipoxygenase 1 (LOX1); CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT3G22400.1); Has 1484 Blast hits to 1444 proteins in 180 species: Archae - 0; Bacteria - 84; Metazoa - 533; Fungi - 49; Plants - 793; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|84680 : 1008.0) no description available & (reliability: 2268.0) & (original description: Putative lox, Description = Lipoxygenase, PFAM = PF00305;PF01477)' T '17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben101scf02688_237640-248728' '(at3g45140 : 1016.0) Chloroplast lipoxygenase required for wound-induced jasmonic acid accumulation in Arabidopsis.Mutants are resistant to Staphylococcus aureus and accumulate salicylic acid upon infection.; lipoxygenase 2 (LOX2); FUNCTIONS IN: lipoxygenase activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT1G67560.1); Has 1459 Blast hits to 1423 proteins in 177 species: Archae - 0; Bacteria - 74; Metazoa - 524; Fungi - 48; Plants - 784; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (q8gsm2|lox23_horvu : 1007.0) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12) (LOX2:Hv:3) - Hordeum vulgare (Barley) & (gnl|cdd|84680 : 858.0) no description available & (reliability: 2032.0) & (original description: Putative lox, Description = Lipoxygenase, PFAM = PF00305;PF01477)' T '17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben101scf02749_99093-105939' '(at1g17420 : 1350.0) Lipoxygenase; lipoxygenase 3 (LOX3); FUNCTIONS IN: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding; INVOLVED IN: growth, response to fungus, jasmonic acid biosynthetic process, response to wounding, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT1G72520.1); Has 1470 Blast hits to 1436 proteins in 179 species: Archae - 0; Bacteria - 76; Metazoa - 529; Fungi - 49; Plants - 787; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (q8h016|lox6_orysa : 1166.0) Probable lipoxygenase 6 (EC 1.13.11.12) - Oryza sativa (Rice) & (gnl|cdd|84680 : 795.0) no description available & (reliability: 2700.0) & (original description: Putative lox, Description = Lipoxygenase, PFAM = PF01477;PF00305)' T '17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben101scf04506_422571-429967' '(at1g67560 : 1090.0) PLAT/LH2 domain-containing lipoxygenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding; INVOLVED IN: oxidation reduction, growth; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT1G72520.1); Has 1467 Blast hits to 1431 proteins in 179 species: Archae - 0; Bacteria - 76; Metazoa - 533; Fungi - 48; Plants - 781; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (q8h016|lox6_orysa : 909.0) Probable lipoxygenase 6 (EC 1.13.11.12) - Oryza sativa (Rice) & (gnl|cdd|84680 : 792.0) no description available & (reliability: 2180.0) & (original description: Putative lox2, Description = Lipoxygenase, PFAM = PF00305)' T '17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben101scf05407_72710-80760' '(at3g22400 : 769.0) LOX5; FUNCTIONS IN: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding; INVOLVED IN: root development; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, LH2 (InterPro:IPR001024), Lipoxygenase, iron binding site (InterPro:IPR020833), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: lipoxygenase 1 (TAIR:AT1G55020.1); Has 1471 Blast hits to 1435 proteins in 177 species: Archae - 0; Bacteria - 82; Metazoa - 527; Fungi - 46; Plants - 787; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (p37831|lox1_soltu : 752.0) Lipoxygenase 1 (EC 1.13.11.12) - Solanum tuberosum (Potato) & (gnl|cdd|84680 : 711.0) no description available & (reliability: 1538.0) & (original description: Putative lox, Description = Lipoxygenase, PFAM = PF00305;PF01477)' T '17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben101scf06364_20084-27108' '(p37831|lox1_soltu : 1431.0) Lipoxygenase 1 (EC 1.13.11.12) - Solanum tuberosum (Potato) & (at1g55020 : 1164.0) lipoxygenase, a defense gene conferring resistance Xanthomonas campestris; lipoxygenase 1 (LOX1); CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT3G22400.1); Has 1484 Blast hits to 1444 proteins in 180 species: Archae - 0; Bacteria - 84; Metazoa - 533; Fungi - 49; Plants - 793; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|84680 : 1057.0) no description available & (reliability: 2328.0) & (original description: Putative lox, Description = Lipoxygenase, PFAM = PF00305;PF01477)' T '17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben101scf08869_12898-19985' '(at3g22400 : 1233.0) LOX5; FUNCTIONS IN: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding; INVOLVED IN: root development; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, LH2 (InterPro:IPR001024), Lipoxygenase, iron binding site (InterPro:IPR020833), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: lipoxygenase 1 (TAIR:AT1G55020.1); Has 1471 Blast hits to 1435 proteins in 177 species: Archae - 0; Bacteria - 82; Metazoa - 527; Fungi - 46; Plants - 787; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (p37831|lox1_soltu : 1199.0) Lipoxygenase 1 (EC 1.13.11.12) - Solanum tuberosum (Potato) & (gnl|cdd|84680 : 1023.0) no description available & (reliability: 2466.0) & (original description: Putative lox1, Description = Lipoxygenase, PFAM = PF01477;PF00305)' T '17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben101scf08869_132525-139452' '(at3g22400 : 1070.0) LOX5; FUNCTIONS IN: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding; INVOLVED IN: root development; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, LH2 (InterPro:IPR001024), Lipoxygenase, iron binding site (InterPro:IPR020833), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: lipoxygenase 1 (TAIR:AT1G55020.1); Has 1471 Blast hits to 1435 proteins in 177 species: Archae - 0; Bacteria - 82; Metazoa - 527; Fungi - 46; Plants - 787; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (p37831|lox1_soltu : 1036.0) Lipoxygenase 1 (EC 1.13.11.12) - Solanum tuberosum (Potato) & (gnl|cdd|84680 : 941.0) no description available & (reliability: 2140.0) & (original description: Putative lox, Description = Lipoxygenase, PFAM = PF00305;PF01477)' T '17.7.1.2' 'hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase' 'niben101scf18951_21738-41000' '(at1g67560 : 961.0) PLAT/LH2 domain-containing lipoxygenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding; INVOLVED IN: oxidation reduction, growth; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT1G72520.1); Has 1467 Blast hits to 1431 proteins in 179 species: Archae - 0; Bacteria - 76; Metazoa - 533; Fungi - 48; Plants - 781; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (q8h016|lox6_orysa : 815.0) Probable lipoxygenase 6 (EC 1.13.11.12) - Oryza sativa (Rice) & (gnl|cdd|84680 : 740.0) no description available & (reliability: 1922.0) & (original description: Putative lox2, Description = Lipoxygenase, PFAM = PF00305;PF01477)' T '17.7.1.3' 'hormone metabolism.jasmonate.synthesis-degradation.allene oxidase synthase' 'niben101scf01574_21901-25343' '(at5g42650 : 459.0) Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity.; allene oxide synthase (AOS); FUNCTIONS IN: hydro-lyase activity, allene oxide synthase activity, oxygen binding; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128); BEST Arabidopsis thaliana protein match is: hydroperoxide lyase 1 (TAIR:AT4G15440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7xys3|c74a2_orysa : 417.0) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase 2) (Hydroperoxide dehydrase 2) - Oryza sativa (Rice) & (reliability: 918.0) & (original description: Putative AOS3, Description = Allene oxide synthase 3, PFAM = PF00067)' T '17.7.1.3' 'hormone metabolism.jasmonate.synthesis-degradation.allene oxidase synthase' 'niben101scf01574_141360-144784' '(at5g42650 : 486.0) Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity.; allene oxide synthase (AOS); FUNCTIONS IN: hydro-lyase activity, allene oxide synthase activity, oxygen binding; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128); BEST Arabidopsis thaliana protein match is: hydroperoxide lyase 1 (TAIR:AT4G15440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7y0c8|c74a1_orysa : 449.0) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92) (Allene oxide synthase 1) (Hydroperoxide dehydrase 1) - Oryza sativa (Rice) & (reliability: 972.0) & (original description: Putative psr2, Description = Cytochrome P450 CYP74C9, PFAM = PF00067)' T '17.7.1.3' 'hormone metabolism.jasmonate.synthesis-degradation.allene oxidase synthase' 'niben101scf04787_83310-120518' '(at5g42650 : 509.0) Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity.; allene oxide synthase (AOS); FUNCTIONS IN: hydro-lyase activity, allene oxide synthase activity, oxygen binding; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128); BEST Arabidopsis thaliana protein match is: hydroperoxide lyase 1 (TAIR:AT4G15440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7y0c8|c74a1_orysa : 461.0) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92) (Allene oxide synthase 1) (Hydroperoxide dehydrase 1) - Oryza sativa (Rice) & (gnl|cdd|35378 : 80.3) no description available & (reliability: 1018.0) & (original description: Putative psr2, Description = Cytochrome P450 CYP74C9, PFAM = PF00067)' T '17.7.1.3' 'hormone metabolism.jasmonate.synthesis-degradation.allene oxidase synthase' 'niben101scf04787_224455-228356' '(at5g42650 : 446.0) Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity.; allene oxide synthase (AOS); FUNCTIONS IN: hydro-lyase activity, allene oxide synthase activity, oxygen binding; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128); BEST Arabidopsis thaliana protein match is: hydroperoxide lyase 1 (TAIR:AT4G15440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7y0c8|c74a1_orysa : 431.0) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92) (Allene oxide synthase 1) (Hydroperoxide dehydrase 1) - Oryza sativa (Rice) & (reliability: 892.0) & (original description: Putative DES, Description = 9-divinyl ether synthase, PFAM = PF00067)' T '17.7.1.3' 'hormone metabolism.jasmonate.synthesis-degradation.allene oxidase synthase' 'niben101scf05799_259379-263016' '(at5g42650 : 658.0) Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity.; allene oxide synthase (AOS); FUNCTIONS IN: hydro-lyase activity, allene oxide synthase activity, oxygen binding; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128); BEST Arabidopsis thaliana protein match is: hydroperoxide lyase 1 (TAIR:AT4G15440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7y0c8|c74a1_orysa : 582.0) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92) (Allene oxide synthase 1) (Hydroperoxide dehydrase 1) - Oryza sativa (Rice) & (reliability: 1316.0) & (original description: Putative AOS1, Description = Allene oxide synthase 1, chloroplastic, PFAM = PF00067)' T '17.7.1.3' 'hormone metabolism.jasmonate.synthesis-degradation.allene oxidase synthase' 'niben101scf07309_7336-10895' '(at5g42650 : 623.0) Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity.; allene oxide synthase (AOS); FUNCTIONS IN: hydro-lyase activity, allene oxide synthase activity, oxygen binding; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128); BEST Arabidopsis thaliana protein match is: hydroperoxide lyase 1 (TAIR:AT4G15440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7y0c8|c74a1_orysa : 556.0) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92) (Allene oxide synthase 1) (Hydroperoxide dehydrase 1) - Oryza sativa (Rice) & (reliability: 1246.0) & (original description: Putative aos, Description = Allene oxide synthase, PFAM = PF00067)' T '17.7.1.3' 'hormone metabolism.jasmonate.synthesis-degradation.allene oxidase synthase' 'niben101scf07709_21455-27428' '(at5g42650 : 510.0) Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity.; allene oxide synthase (AOS); FUNCTIONS IN: hydro-lyase activity, allene oxide synthase activity, oxygen binding; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128); BEST Arabidopsis thaliana protein match is: hydroperoxide lyase 1 (TAIR:AT4G15440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7y0c8|c74a1_orysa : 457.0) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92) (Allene oxide synthase 1) (Hydroperoxide dehydrase 1) - Oryza sativa (Rice) & (reliability: 1020.0) & (original description: Putative psr2, Description = Cytochrome P450 CYP74C9, PFAM = PF00067)' T '17.7.1.4' 'hormone metabolism.jasmonate.synthesis-degradation.allene oxidase cyclase' 'niben101scf02772_247600-250531' '(gnl|cdd|87067 : 318.0) no description available & (at3g25780 : 244.0) Encodes allene oxide cyclase, one of the enzymes involved in jasmonic acid biosynthesis. One of four genes in Arabidopsis that encode this enzyme. mRNA expression is upregulated in senescing leaves. Note: Nomenclature for Arabidopsis allene oxide cyclase 3 (AOC3, AT3G25780) gene is based on Stenzel et al. 2003 Plant Molecular Biology 51:895-911. AOC3 (AT3G25780) is also referred to as AOC2 in He et al. 2002 Plant Physiology, 128:876-884.; allene oxide cyclase 3 (AOC3); FUNCTIONS IN: allene-oxide cyclase activity; INVOLVED IN: response to salt stress, response to fungus, jasmonic acid biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Allene oxide cyclase (InterPro:IPR009410); BEST Arabidopsis thaliana protein match is: allene oxide cyclase 2 (TAIR:AT3G25770.1); Has 202 Blast hits to 202 proteins in 32 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 198; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 488.0) & (original description: Putative aoc, Description = Allene oxide cyclase, PFAM = PF06351)' T '17.7.1.4' 'hormone metabolism.jasmonate.synthesis-degradation.allene oxidase cyclase' 'niben101scf13816_150134-153064' '(gnl|cdd|87067 : 317.0) no description available & (at3g25780 : 246.0) Encodes allene oxide cyclase, one of the enzymes involved in jasmonic acid biosynthesis. One of four genes in Arabidopsis that encode this enzyme. mRNA expression is upregulated in senescing leaves. Note: Nomenclature for Arabidopsis allene oxide cyclase 3 (AOC3, AT3G25780) gene is based on Stenzel et al. 2003 Plant Molecular Biology 51:895-911. AOC3 (AT3G25780) is also referred to as AOC2 in He et al. 2002 Plant Physiology, 128:876-884.; allene oxide cyclase 3 (AOC3); FUNCTIONS IN: allene-oxide cyclase activity; INVOLVED IN: response to salt stress, response to fungus, jasmonic acid biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Allene oxide cyclase (InterPro:IPR009410); BEST Arabidopsis thaliana protein match is: allene oxide cyclase 2 (TAIR:AT3G25770.1); Has 202 Blast hits to 202 proteins in 32 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 198; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative aoc, Description = Allene oxide cyclase, PFAM = PF06351)' T '17.7.1.5' 'hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase' 'nbv0.3scaffold16853_1-6048' '(at2g06050 : 616.0) Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehiscence. Shows activity towards 2,4,6-trinitrotoluene.; oxophytodienoate-reductase 3 (OPR3); FUNCTIONS IN: 12-oxophytodienoate reductase activity; INVOLVED IN: response to jasmonic acid stimulus, response to fungus, jasmonic acid biosynthetic process, response to wounding, response to ozone; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NADH:flavin oxidoreductase/NADH oxidase, N-terminal (InterPro:IPR001155), Aldolase-type TIM barrel (InterPro:IPR013785); BEST Arabidopsis thaliana protein match is: 12-oxophytodienoate reductase 2 (TAIR:AT1G76690.1); Has 13056 Blast hits to 13024 proteins in 2039 species: Archae - 127; Bacteria - 9671; Metazoa - 31; Fungi - 870; Plants - 454; Viruses - 0; Other Eukaryotes - 1903 (source: NCBI BLink). & (gnl|cdd|73381 : 463.0) no description available & (gnl|cdd|35356 : 365.0) no description available & (reliability: 1232.0) & (original description: Putative opr3, Description = 12-oxophytodienoate reductase 3, PFAM = PF00724)' T '17.7.1.5' 'hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase' 'nbv0.5scaffold3799_212742-215272' '(at1g76690 : 228.0) Encodes one of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Predicted to be a cytosolic protein.; 12-oxophytodienoate reductase 2 (OPR2); CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), NADH:flavin oxidoreductase/NADH oxidase, N-terminal (InterPro:IPR001155); BEST Arabidopsis thaliana protein match is: 12-oxophytodienoate reductase 1 (TAIR:AT1G76680.1); Has 13197 Blast hits to 13176 proteins in 2056 species: Archae - 127; Bacteria - 9811; Metazoa - 29; Fungi - 865; Plants - 452; Viruses - 0; Other Eukaryotes - 1913 (source: NCBI BLink). & (gnl|cdd|73381 : 220.0) no description available & (gnl|cdd|35356 : 179.0) no description available & (reliability: 456.0) & (original description: Putative opr2, Description = 12-oxophytodienoate reductase 2, PFAM = PF00724)' T '17.7.1.5' 'hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase' 'niben101scf00408_267433-272391' '(at1g76690 : 617.0) Encodes one of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Predicted to be a cytosolic protein.; 12-oxophytodienoate reductase 2 (OPR2); CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), NADH:flavin oxidoreductase/NADH oxidase, N-terminal (InterPro:IPR001155); BEST Arabidopsis thaliana protein match is: 12-oxophytodienoate reductase 1 (TAIR:AT1G76680.1); Has 13197 Blast hits to 13176 proteins in 2056 species: Archae - 127; Bacteria - 9811; Metazoa - 29; Fungi - 865; Plants - 452; Viruses - 0; Other Eukaryotes - 1913 (source: NCBI BLink). & (gnl|cdd|73381 : 485.0) no description available & (gnl|cdd|35356 : 403.0) no description available & (reliability: 1234.0) & (original description: Putative OPR1, Description = 12-oxophytodienoate reductase 1, PFAM = PF00724)' T '17.7.1.5' 'hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase' 'niben101scf00779_654271-659459' '(at1g76690 : 623.0) Encodes one of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Predicted to be a cytosolic protein.; 12-oxophytodienoate reductase 2 (OPR2); CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), NADH:flavin oxidoreductase/NADH oxidase, N-terminal (InterPro:IPR001155); BEST Arabidopsis thaliana protein match is: 12-oxophytodienoate reductase 1 (TAIR:AT1G76680.1); Has 13197 Blast hits to 13176 proteins in 2056 species: Archae - 127; Bacteria - 9811; Metazoa - 29; Fungi - 865; Plants - 452; Viruses - 0; Other Eukaryotes - 1913 (source: NCBI BLink). & (gnl|cdd|73381 : 493.0) no description available & (gnl|cdd|35356 : 408.0) no description available & (reliability: 1246.0) & (original description: Putative OPR2, Description = 12-oxophytodienoate reductase 2, PFAM = PF00724)' T '17.7.1.5' 'hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase' 'niben101scf02467_147245-156773' '(at2g06050 : 457.0) Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehiscence. Shows activity towards 2,4,6-trinitrotoluene.; oxophytodienoate-reductase 3 (OPR3); FUNCTIONS IN: 12-oxophytodienoate reductase activity; INVOLVED IN: response to jasmonic acid stimulus, response to fungus, jasmonic acid biosynthetic process, response to wounding, response to ozone; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NADH:flavin oxidoreductase/NADH oxidase, N-terminal (InterPro:IPR001155), Aldolase-type TIM barrel (InterPro:IPR013785); BEST Arabidopsis thaliana protein match is: 12-oxophytodienoate reductase 2 (TAIR:AT1G76690.1); Has 13056 Blast hits to 13024 proteins in 2039 species: Archae - 127; Bacteria - 9671; Metazoa - 31; Fungi - 870; Plants - 454; Viruses - 0; Other Eukaryotes - 1903 (source: NCBI BLink). & (gnl|cdd|73381 : 293.0) no description available & (gnl|cdd|35356 : 253.0) no description available & (reliability: 914.0) & (original description: Putative opr, Description = 12-oxophytodienoate reductase 3, PFAM = PF00724;PF00724;PF00724)' T '17.7.1.5' 'hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase' 'niben101scf05804_312331-331077' '(at2g06050 : 606.0) Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehiscence. Shows activity towards 2,4,6-trinitrotoluene.; oxophytodienoate-reductase 3 (OPR3); FUNCTIONS IN: 12-oxophytodienoate reductase activity; INVOLVED IN: response to jasmonic acid stimulus, response to fungus, jasmonic acid biosynthetic process, response to wounding, response to ozone; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NADH:flavin oxidoreductase/NADH oxidase, N-terminal (InterPro:IPR001155), Aldolase-type TIM barrel (InterPro:IPR013785); BEST Arabidopsis thaliana protein match is: 12-oxophytodienoate reductase 2 (TAIR:AT1G76690.1); Has 13056 Blast hits to 13024 proteins in 2039 species: Archae - 127; Bacteria - 9671; Metazoa - 31; Fungi - 870; Plants - 454; Viruses - 0; Other Eukaryotes - 1903 (source: NCBI BLink). & (gnl|cdd|73381 : 458.0) no description available & (gnl|cdd|35356 : 356.0) no description available & (reliability: 1212.0) & (original description: Putative opr3, Description = 12-oxophytodienoate reductase 3, PFAM = PF00724)' T '17.7.1.10' 'hormone metabolism.jasmonate.synthesis-degradation.jasmonate-O-methyltransferase' 'nbv0.3scaffold3300_1054-6132' '(gnl|cdd|86349 : 376.0) no description available & (q9fyz9|bamt_antma : 253.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (at3g11480 : 249.0) The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism.; BSMT1; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 958 Blast hits to 946 proteins in 124 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 5; Plants - 736; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (reliability: 478.0) & (original description: Putative CS3, Description = Probable caffeine synthase 3, PFAM = PF03492)' T '17.7.1.10' 'hormone metabolism.jasmonate.synthesis-degradation.jasmonate-O-methyltransferase' 'nbv0.3scaffold48654_1190-5846' '(gnl|cdd|86349 : 361.0) no description available & (q9fyz9|bamt_antma : 253.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (at4g36470 : 249.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G11480.1); Has 909 Blast hits to 891 proteins in 125 species: Archae - 0; Bacteria - 69; Metazoa - 9; Fungi - 5; Plants - 730; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative samt, Description = Salicylic acid carboxyl methyltransferase, PFAM = PF03492)' T '17.7.1.10' 'hormone metabolism.jasmonate.synthesis-degradation.jasmonate-O-methyltransferase' 'nbv0.5scaffold5153_4081-8558' '(gnl|cdd|86349 : 339.0) no description available & (at3g11480 : 202.0) The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism.; BSMT1; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 958 Blast hits to 946 proteins in 124 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 5; Plants - 736; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (q9fyz9|bamt_antma : 195.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 372.0) & (original description: Putative XMT1, Description = 7-methylxanthosine synthase 1, PFAM = PF03492)' T '17.7.1.10' 'hormone metabolism.jasmonate.synthesis-degradation.jasmonate-O-methyltransferase' 'niben101scf00536_1244071-1249499' '(gnl|cdd|86349 : 421.0) no description available & (at3g11480 : 295.0) The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism.; BSMT1; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 958 Blast hits to 946 proteins in 124 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 5; Plants - 736; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (q9fyz9|bamt_antma : 287.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 540.0) & (original description: Putative samt, Description = Salicylic acid carboxyl methyltransferase, PFAM = PF03492)' T '17.7.1.10' 'hormone metabolism.jasmonate.synthesis-degradation.jasmonate-O-methyltransferase' 'niben101scf03560_271440-277924' '(gnl|cdd|86349 : 374.0) no description available & (at1g19640 : 346.0) Encodes a S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase that catalyzes the formation of methyljasmonate from jasmonic acid. Its expression is induced in response to wounding or methyljasmonate treatment.; jasmonic acid carboxyl methyltransferase (JMT); CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G11480.1); Has 890 Blast hits to 871 proteins in 121 species: Archae - 0; Bacteria - 61; Metazoa - 9; Fungi - 5; Plants - 740; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (q9fyz9|bamt_antma : 245.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 692.0) & (original description: Putative JMT, Description = Jasmonate O-methyltransferase, PFAM = PF03492)' T '17.7.1.10' 'hormone metabolism.jasmonate.synthesis-degradation.jasmonate-O-methyltransferase' 'niben101scf14294_6747-11825' '(gnl|cdd|86349 : 364.0) no description available & (at5g66430 : 248.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9fyz9|bamt_antma : 239.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 456.0) & (original description: Putative XMT1, Description = 7-methylxanthosine synthase 1, PFAM = PF03492)' T '17.7.1.1001' 'hormone metabolism.jasmonate.synthesis-degradation' 'oxophytodienoic acid' 'hormone metabolism.jasmonate. Precursor of jasmonic acid' M '17.7.1.1002' 'hormone metabolism.jasmonate.synthesis-degradation' 'jasmonic acid' 'hormone metabolism.jasmonate' M '17.7.2' 'hormone metabolism.jasmonate.signal transduction' 'nbv0.3scaffold36634_4334-8058' '(at1g19180 : 129.0) JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.; TIFY10A; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: TIFY domain/Divergent CCT motif family protein (TAIR:AT1G74950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative SlSRG1, Description = Jasmonate ZIM-domain protein 1, PFAM = PF09425;PF06200)' T '17.7.2' 'hormone metabolism.jasmonate.signal transduction' 'niben044scf00030612ctg004_2267-7679' '(at3g17860 : 128.0) JAZs are direct targets of the SCFCOI1 E3 ubiquitin-ligase and JA treatment induces their proteasome-mediated degradation. Furthermore, JAI3 negatively regulates the key transcriptional activator of JA responses, AtMYC2. The C-terminal portion of JAZ3, including the Jas domain, appears to be important for JAZ3-COI1 binding in the presence of coronatine.; jasmonate-zim-domain protein 3 (JAZ3); FUNCTIONS IN: protein binding; INVOLVED IN: jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 4 (TAIR:AT1G48500.1); Has 405 Blast hits to 373 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative JAZ4, Description = OsTIFY6b, PFAM = PF06200;PF09425)' T '17.7.2' 'hormone metabolism.jasmonate.signal transduction' 'niben044scf00049424ctg007_6209-11857' '(at3g17860 : 140.0) JAZs are direct targets of the SCFCOI1 E3 ubiquitin-ligase and JA treatment induces their proteasome-mediated degradation. Furthermore, JAI3 negatively regulates the key transcriptional activator of JA responses, AtMYC2. The C-terminal portion of JAZ3, including the Jas domain, appears to be important for JAZ3-COI1 binding in the presence of coronatine.; jasmonate-zim-domain protein 3 (JAZ3); FUNCTIONS IN: protein binding; INVOLVED IN: jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 4 (TAIR:AT1G48500.1); Has 405 Blast hits to 373 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative JAZ4, Description = OsTIFY6b, PFAM = PF09425;PF06200)' T '17.7.2' 'hormone metabolism.jasmonate.signal transduction' 'niben101scf00298_88653-92313' '(at1g19180 : 124.0) JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.; TIFY10A; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: TIFY domain/Divergent CCT motif family protein (TAIR:AT1G74950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative TIFY10A, Description = Protein TIFY 10A, PFAM = PF06200;PF09425)' T '17.7.2' 'hormone metabolism.jasmonate.signal transduction' 'niben101scf01940_120160-125186' '(at3g17860 : 124.0) JAZs are direct targets of the SCFCOI1 E3 ubiquitin-ligase and JA treatment induces their proteasome-mediated degradation. Furthermore, JAI3 negatively regulates the key transcriptional activator of JA responses, AtMYC2. The C-terminal portion of JAZ3, including the Jas domain, appears to be important for JAZ3-COI1 binding in the presence of coronatine.; jasmonate-zim-domain protein 3 (JAZ3); FUNCTIONS IN: protein binding; INVOLVED IN: jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 4 (TAIR:AT1G48500.1); Has 405 Blast hits to 373 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative L484_004559, Description = Protein TIFY 6B, PFAM = PF09425;PF06200)' T '17.7.2' 'hormone metabolism.jasmonate.signal transduction' 'niben101scf02919_291828-298610' '(at3g17860 : 90.1) JAZs are direct targets of the SCFCOI1 E3 ubiquitin-ligase and JA treatment induces their proteasome-mediated degradation. Furthermore, JAI3 negatively regulates the key transcriptional activator of JA responses, AtMYC2. The C-terminal portion of JAZ3, including the Jas domain, appears to be important for JAZ3-COI1 binding in the presence of coronatine.; jasmonate-zim-domain protein 3 (JAZ3); FUNCTIONS IN: protein binding; INVOLVED IN: jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 4 (TAIR:AT1G48500.1); Has 405 Blast hits to 373 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative L484_004559, Description = Protein TIFY 6B, PFAM = PF06200;PF09425)' T '17.7.2' 'hormone metabolism.jasmonate.signal transduction' 'niben101scf04892_1-5900' '(at3g17860 : 99.8) JAZs are direct targets of the SCFCOI1 E3 ubiquitin-ligase and JA treatment induces their proteasome-mediated degradation. Furthermore, JAI3 negatively regulates the key transcriptional activator of JA responses, AtMYC2. The C-terminal portion of JAZ3, including the Jas domain, appears to be important for JAZ3-COI1 binding in the presence of coronatine.; jasmonate-zim-domain protein 3 (JAZ3); FUNCTIONS IN: protein binding; INVOLVED IN: jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 4 (TAIR:AT1G48500.1); Has 405 Blast hits to 373 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 199.6) & (original description: Putative , Description = , PFAM = PF06200;PF09425)' T '17.7.2' 'hormone metabolism.jasmonate.signal transduction' 'niben101scf08390_853833-859303' '(at3g17860 : 129.0) JAZs are direct targets of the SCFCOI1 E3 ubiquitin-ligase and JA treatment induces their proteasome-mediated degradation. Furthermore, JAI3 negatively regulates the key transcriptional activator of JA responses, AtMYC2. The C-terminal portion of JAZ3, including the Jas domain, appears to be important for JAZ3-COI1 binding in the presence of coronatine.; jasmonate-zim-domain protein 3 (JAZ3); FUNCTIONS IN: protein binding; INVOLVED IN: jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 4 (TAIR:AT1G48500.1); Has 405 Blast hits to 373 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative JAZ4, Description = OsTIFY6b, PFAM = PF09425;PF06200)' T '17.7.2' 'hormone metabolism.jasmonate.signal transduction' 'niben101scf09028_138080-143088' '(at3g17860 : 118.0) JAZs are direct targets of the SCFCOI1 E3 ubiquitin-ligase and JA treatment induces their proteasome-mediated degradation. Furthermore, JAI3 negatively regulates the key transcriptional activator of JA responses, AtMYC2. The C-terminal portion of JAZ3, including the Jas domain, appears to be important for JAZ3-COI1 binding in the presence of coronatine.; jasmonate-zim-domain protein 3 (JAZ3); FUNCTIONS IN: protein binding; INVOLVED IN: jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 4 (TAIR:AT1G48500.1); Has 405 Blast hits to 373 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative L484_004559, Description = Protein TIFY 6B, PFAM = PF06200;PF09425)' T '17.7.2' 'hormone metabolism.jasmonate.signal transduction' 'niben101scf16657_78927-81633' '(at1g19180 : 132.0) JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.; TIFY10A; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: TIFY domain/Divergent CCT motif family protein (TAIR:AT1G74950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative JAZ1, Description = BnaA09g44300D protein, PFAM = PF06200;PF09425)' T '17.7.2' 'hormone metabolism.jasmonate.signal transduction' 'niben101scf34602_3082-6794' '(at1g19180 : 133.0) JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.; TIFY10A; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: TIFY domain/Divergent CCT motif family protein (TAIR:AT1G74950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative , Description = Jasmonate ZIM-domain protein 1, PFAM = PF09425;PF06200)' T '17.7.3' 'hormone metabolism.jasmonate.induced-regulated-responsive-activated' '' '' '17.8' 'hormone metabolism.salicylic acid' '' '' '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'nbv0.3scaffold3300_1054-6132' '(gnl|cdd|86349 : 376.0) no description available & (q9fyz9|bamt_antma : 253.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (at3g11480 : 249.0) The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism.; BSMT1; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 958 Blast hits to 946 proteins in 124 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 5; Plants - 736; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative CS3, Description = Probable caffeine synthase 3, PFAM = PF03492)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'nbv0.3scaffold48654_1190-5846' '(gnl|cdd|86349 : 361.0) no description available & (q9fyz9|bamt_antma : 253.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (at4g36470 : 249.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G11480.1); Has 909 Blast hits to 891 proteins in 125 species: Archae - 0; Bacteria - 69; Metazoa - 9; Fungi - 5; Plants - 730; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative samt, Description = Salicylic acid carboxyl methyltransferase, PFAM = PF03492)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'nbv0.5scaffold253_418977-421584' '(at2g31790 : 169.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: Uridine diphosphate glycosyltransferase 74E2 (TAIR:AT1G05680.1); Has 8757 Blast hits to 8682 proteins in 575 species: Archae - 0; Bacteria - 847; Metazoa - 2565; Fungi - 65; Plants - 5076; Viruses - 120; Other Eukaryotes - 84 (source: NCBI BLink). & (q41819|iaag_maize : 118.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 89.2) no description available & (reliability: 336.0) & (original description: Putative UGT3, Description = Glycosyltransferase, PFAM = PF00201)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'nbv0.5scaffold4129_168507-171886' '(at1g05670 : 212.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G01110.1); Has 76919 Blast hits to 23782 proteins in 722 species: Archae - 3; Bacteria - 657; Metazoa - 3612; Fungi - 1352; Plants - 68766; Viruses - 129; Other Eukaryotes - 2400 (source: NCBI BLink). & (q76c99|rf1_orysa : 197.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 424.0) & (original description: Putative , Description = , PFAM = PF01535;PF01535;PF13041;PF13041;PF13041;PF12854;PF12854)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'nbv0.5scaffold5153_4081-8558' '(gnl|cdd|86349 : 339.0) no description available & (at3g11480 : 202.0) The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism.; BSMT1; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 958 Blast hits to 946 proteins in 124 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 5; Plants - 736; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (q9fyz9|bamt_antma : 195.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 398.0) & (original description: Putative XMT1, Description = 7-methylxanthosine synthase 1, PFAM = PF03492)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben044scf00006077ctg025_3245-7181' '(at1g05680 : 380.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 290.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 195.0) no description available & (gnl|cdd|79510 : 111.0) no description available & (reliability: 760.0) & (original description: Putative UGT74E2, Description = UDP-glycosyltransferase 74E2, PFAM = PF00201)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben044scf00019806ctg002_15710-18414' '(at1g05680 : 251.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 190.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 134.0) no description available & (gnl|cdd|79510 : 102.0) no description available & (reliability: 502.0) & (original description: Putative GT, Description = Glycosyltransferase, PFAM = PF00201)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben044scf00020943ctg015_11409-16047' '(at1g05670 : 878.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G01110.1); Has 76919 Blast hits to 23782 proteins in 722 species: Archae - 3; Bacteria - 657; Metazoa - 3612; Fungi - 1352; Plants - 68766; Viruses - 129; Other Eukaryotes - 2400 (source: NCBI BLink). & (q76c99|rf1_orysa : 265.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1756.0) & (original description: Putative At1g05670, Description = Pentatricopeptide repeat-containing protein At1g05670, mitochondrial, PFAM = PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF12854)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf00536_1244071-1249499' '(gnl|cdd|86349 : 421.0) no description available & (at3g11480 : 295.0) The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism.; BSMT1; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 958 Blast hits to 946 proteins in 124 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 5; Plants - 736; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (q9fyz9|bamt_antma : 287.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 586.0) & (original description: Putative samt, Description = Salicylic acid carboxyl methyltransferase, PFAM = PF03492)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf00788_100721-104985' '(at2g43820 : 421.0) Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and athranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F2 are not known, but mutant plants lacking UGT74F2 have a decreased level of SAG and SGE.; UDP-glucosyltransferase 74F2 (UGT74F2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 74 F1 (TAIR:AT2G43840.1); Has 8409 Blast hits to 8329 proteins in 546 species: Archae - 0; Bacteria - 818; Metazoa - 2323; Fungi - 31; Plants - 5038; Viruses - 125; Other Eukaryotes - 74 (source: NCBI BLink). & (q41819|iaag_maize : 342.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 225.0) no description available & (gnl|cdd|79510 : 97.3) no description available & (reliability: 820.0) & (original description: Putative UGT74G1, Description = UDP-glycosyltransferase 74G1, PFAM = PF00201)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf00788_124588-129067' '(at2g43840 : 447.0) UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside), benzoic acid, quercetin, and athranilate in vitro. UGT74F1 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F1 are not known, but mutant plants lacking UGT74F1 have a decreased level of salicylate glucoside.; UDP-glycosyltransferase 74 F1 (UGT74F1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 74F2 (TAIR:AT2G43820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41819|iaag_maize : 343.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 224.0) no description available & (gnl|cdd|79510 : 95.8) no description available & (reliability: 876.0) & (original description: Putative UGT74G1, Description = UDP-glycosyltransferase 74G1, PFAM = PF00201)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf00788_192997-196866' '(at2g43820 : 440.0) Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and athranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F2 are not known, but mutant plants lacking UGT74F2 have a decreased level of SAG and SGE.; UDP-glucosyltransferase 74F2 (UGT74F2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 74 F1 (TAIR:AT2G43840.1); Has 8409 Blast hits to 8329 proteins in 546 species: Archae - 0; Bacteria - 818; Metazoa - 2323; Fungi - 31; Plants - 5038; Viruses - 125; Other Eukaryotes - 74 (source: NCBI BLink). & (q41819|iaag_maize : 357.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 224.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 818.0) & (original description: Putative UGT74F2, Description = UDP-glycosyltransferase 74F2, PFAM = PF00201)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf00927_274221-277870' '(gnl|cdd|86349 : 291.0) no description available & (at1g68040 : 231.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G38100.1); Has 919 Blast hits to 907 proteins in 124 species: Archae - 0; Bacteria - 69; Metazoa - 11; Fungi - 5; Plants - 720; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (q9fyz9|bamt_antma : 110.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 462.0) & (original description: Putative LAMT, Description = Putative loganic acid O-methyltransferase, PFAM = PF03492)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf01017_305263-309338' '(at1g05680 : 381.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 285.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 198.0) no description available & (gnl|cdd|79510 : 108.0) no description available & (reliability: 762.0) & (original description: Putative GT, Description = Glycosyltransferase, PFAM = PF00201)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf01146_1201265-1205921' '(gnl|cdd|86349 : 254.0) no description available & (q9fyz9|bamt_antma : 183.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (at5g04370 : 180.0) A member of the Arabidopsis SABATH methyltransferase gene family. Encodes NAMT1, a methyltransferase that methylates nicotinic acid.; NAMT1; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G11480.1); Has 935 Blast hits to 920 proteins in 124 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 5; Plants - 729; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative samt, Description = Salicylic acid methyl transferase, PFAM = PF03492)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf01163_81954-86964' '(gnl|cdd|86349 : 373.0) no description available & (q9fyz9|bamt_antma : 311.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (at5g66430 : 292.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 584.0) & (original description: Putative samt, Description = Salicylic acid carboxyl methyltransferase, PFAM = PF03492)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf01225_244495-251830' '(at1g05680 : 448.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 328.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 200.0) no description available & (gnl|cdd|79510 : 110.0) no description available & (reliability: 896.0) & (original description: Putative UGT74E2, Description = UDP-glycosyltransferase 74E2, PFAM = PF00201)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf02114_58079-61712' '(gnl|cdd|86349 : 328.0) no description available & (at1g68040 : 301.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G38100.1); Has 919 Blast hits to 907 proteins in 124 species: Archae - 0; Bacteria - 69; Metazoa - 11; Fungi - 5; Plants - 720; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (q9fyz9|bamt_antma : 161.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 602.0) & (original description: Putative At5g38100, Description = Probable S-adenosylmethionine-dependent methyltransferase At5g38100, PFAM = PF03492)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf02114_155933-167439' '(gnl|cdd|86349 : 326.0) no description available & (at1g68040 : 290.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G38100.1); Has 919 Blast hits to 907 proteins in 124 species: Archae - 0; Bacteria - 69; Metazoa - 11; Fungi - 5; Plants - 720; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (q9fyz9|bamt_antma : 171.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 580.0) & (original description: Putative At5g37970, Description = Probable S-adenosylmethionine-dependent methyltransferase At5g37970, PFAM = PF03492)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf02114_163539-166919' '(gnl|cdd|86349 : 236.0) no description available & (at1g68040 : 210.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G38100.1); Has 919 Blast hits to 907 proteins in 124 species: Archae - 0; Bacteria - 69; Metazoa - 11; Fungi - 5; Plants - 720; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (q9fyz9|bamt_antma : 141.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 420.0) & (original description: Putative LAMT, Description = Putative loganic acid O-methyltransferase, PFAM = PF03492)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf03012_308730-312538' '(at2g43840 : 434.0) UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside), benzoic acid, quercetin, and athranilate in vitro. UGT74F1 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F1 are not known, but mutant plants lacking UGT74F1 have a decreased level of salicylate glucoside.; UDP-glycosyltransferase 74 F1 (UGT74F1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 74F2 (TAIR:AT2G43820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41819|iaag_maize : 330.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 212.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 842.0) & (original description: Putative UGT74F1, Description = UDP-glycosyltransferase 74F1, PFAM = PF00201)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf05931_132518-139002' '(at4g36470 : 452.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G11480.1); Has 909 Blast hits to 891 proteins in 125 species: Archae - 0; Bacteria - 69; Metazoa - 9; Fungi - 5; Plants - 730; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (gnl|cdd|86349 : 339.0) no description available & (q9fyz9|bamt_antma : 239.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 904.0) & (original description: Putative CS3, Description = Probable caffeine synthase 3, PFAM = PF03492)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf06603_146652-160645' '(at3g16710 : 176.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT5G41170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 167.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 338.0) & (original description: Putative , Description = , PFAM = PF12854;PF01535;PF01535;PF13041;PF13041)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf08194_206577-210902' '(at4g36470 : 432.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G11480.1); Has 909 Blast hits to 891 proteins in 125 species: Archae - 0; Bacteria - 69; Metazoa - 9; Fungi - 5; Plants - 730; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (gnl|cdd|86349 : 346.0) no description available & (q9fyz9|bamt_antma : 237.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 864.0) & (original description: Putative samt, Description = Salicylic acid carboxyl methyltransferase, PFAM = PF03492)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf09822_11856-15632' '(at1g05680 : 388.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 293.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 202.0) no description available & (gnl|cdd|79510 : 118.0) no description available & (reliability: 776.0) & (original description: Putative UGT74P1, Description = Glycosyltransferase, PFAM = PF00201)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf09822_212562-216935' '(at1g05680 : 318.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 236.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 176.0) no description available & (gnl|cdd|79510 : 113.0) no description available & (reliability: 636.0) & (original description: Putative PGT, Description = Glycosyltransferase, PFAM = PF00201)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf09822_212586-216989' '(at1g05680 : 403.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 315.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 196.0) no description available & (gnl|cdd|79510 : 114.0) no description available & (reliability: 806.0) & (original description: Putative UGT74P1, Description = Glycosyltransferase, PFAM = PF00201)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf12922_62197-65595' '(at1g05670 : 203.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G01110.1); Has 76919 Blast hits to 23782 proteins in 722 species: Archae - 3; Bacteria - 657; Metazoa - 3612; Fungi - 1352; Plants - 68766; Viruses - 129; Other Eukaryotes - 2400 (source: NCBI BLink). & (q76c99|rf1_orysa : 189.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 406.0) & (original description: Putative , Description = , PFAM = PF13041;PF13041;PF13041;PF12854;PF12854;PF01535;PF01535)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf14294_6747-11825' '(gnl|cdd|86349 : 364.0) no description available & (at5g66430 : 248.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9fyz9|bamt_antma : 239.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 496.0) & (original description: Putative XMT1, Description = 7-methylxanthosine synthase 1, PFAM = PF03492)' T '17.8.1' 'hormone metabolism.salicylic acid.synthesis-degradation' 'niben101scf15227_82586-85398' '(at5g64320 : 146.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G74580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 132.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 282.0) & (original description: Putative , Description = Pentatricopeptide (PPR) repeat protein, putative, PFAM = PF01535;PF13041;PF13041;PF13041;PF12854)' T '17.8.1.1' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis' '' '' '17.8.1.1.2' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.isochorismate pyruvate lyase' '' '' '17.8.1.1.3' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.benzoic acid-2-hydroxylase' '' '' '17.8.1.1.4' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.SA glucosyltransferase ether bond making SAG' 'niben101scf00788_100721-104985' '(at2g43820 : 421.0) Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and athranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F2 are not known, but mutant plants lacking UGT74F2 have a decreased level of SAG and SGE.; UDP-glucosyltransferase 74F2 (UGT74F2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 74 F1 (TAIR:AT2G43840.1); Has 8409 Blast hits to 8329 proteins in 546 species: Archae - 0; Bacteria - 818; Metazoa - 2323; Fungi - 31; Plants - 5038; Viruses - 125; Other Eukaryotes - 74 (source: NCBI BLink). & (q41819|iaag_maize : 342.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 225.0) no description available & (gnl|cdd|79510 : 97.3) no description available & (reliability: 842.0) & (original description: Putative UGT74G1, Description = UDP-glycosyltransferase 74G1, PFAM = PF00201)' T '17.8.1.1.4' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.SA glucosyltransferase ether bond making SAG' 'niben101scf00788_124588-129067' '(at2g43840 : 447.0) UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside), benzoic acid, quercetin, and athranilate in vitro. UGT74F1 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F1 are not known, but mutant plants lacking UGT74F1 have a decreased level of salicylate glucoside.; UDP-glycosyltransferase 74 F1 (UGT74F1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 74F2 (TAIR:AT2G43820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41819|iaag_maize : 343.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 224.0) no description available & (gnl|cdd|79510 : 95.8) no description available & (reliability: 894.0) & (original description: Putative UGT74G1, Description = UDP-glycosyltransferase 74G1, PFAM = PF00201)' T '17.8.1.1.4' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.SA glucosyltransferase ether bond making SAG' 'niben101scf00788_192997-196866' '(at2g43820 : 440.0) Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and athranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F2 are not known, but mutant plants lacking UGT74F2 have a decreased level of SAG and SGE.; UDP-glucosyltransferase 74F2 (UGT74F2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 74 F1 (TAIR:AT2G43840.1); Has 8409 Blast hits to 8329 proteins in 546 species: Archae - 0; Bacteria - 818; Metazoa - 2323; Fungi - 31; Plants - 5038; Viruses - 125; Other Eukaryotes - 74 (source: NCBI BLink). & (q41819|iaag_maize : 357.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 224.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 854.0) & (original description: Putative UGT74F2, Description = UDP-glycosyltransferase 74F2, PFAM = PF00201)' T '17.8.1.1.4' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.SA glucosyltransferase ether bond making SAG' 'niben101scf03012_308730-312538' '(at2g43840 : 434.0) UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside), benzoic acid, quercetin, and athranilate in vitro. UGT74F1 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F1 are not known, but mutant plants lacking UGT74F1 have a decreased level of salicylate glucoside.; UDP-glycosyltransferase 74 F1 (UGT74F1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 74F2 (TAIR:AT2G43820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41819|iaag_maize : 330.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 212.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 868.0) & (original description: Putative UGT74F1, Description = UDP-glycosyltransferase 74F1, PFAM = PF00201)' T '17.8.1.1.4' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.SA glucosyltransferase ether bond making SAG' 'niben101scf05415_61553-65549' '(at2g43820 : 527.0) Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and athranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F2 are not known, but mutant plants lacking UGT74F2 have a decreased level of SAG and SGE.; UDP-glucosyltransferase 74F2 (UGT74F2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 74 F1 (TAIR:AT2G43840.1); Has 8409 Blast hits to 8329 proteins in 546 species: Archae - 0; Bacteria - 818; Metazoa - 2323; Fungi - 31; Plants - 5038; Viruses - 125; Other Eukaryotes - 74 (source: NCBI BLink). & (q41819|iaag_maize : 351.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 218.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 1012.0) & (original description: Putative UGT74F2, Description = UDP-glycosyltransferase 74F2, PFAM = PF00201)' T '17.8.1.1.5' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.SA glucosyltransferase ester and ether bond making SGE, SAG' 'niben101scf00788_100721-104985' '(at2g43820 : 421.0) Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and athranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F2 are not known, but mutant plants lacking UGT74F2 have a decreased level of SAG and SGE.; UDP-glucosyltransferase 74F2 (UGT74F2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 74 F1 (TAIR:AT2G43840.1); Has 8409 Blast hits to 8329 proteins in 546 species: Archae - 0; Bacteria - 818; Metazoa - 2323; Fungi - 31; Plants - 5038; Viruses - 125; Other Eukaryotes - 74 (source: NCBI BLink). & (q41819|iaag_maize : 342.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 225.0) no description available & (gnl|cdd|79510 : 97.3) no description available & (reliability: 842.0) & (original description: Putative UGT74G1, Description = UDP-glycosyltransferase 74G1, PFAM = PF00201)' T '17.8.1.1.5' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.SA glucosyltransferase ester and ether bond making SGE, SAG' 'niben101scf00788_124588-129067' '(at2g43840 : 447.0) UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside), benzoic acid, quercetin, and athranilate in vitro. UGT74F1 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F1 are not known, but mutant plants lacking UGT74F1 have a decreased level of salicylate glucoside.; UDP-glycosyltransferase 74 F1 (UGT74F1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 74F2 (TAIR:AT2G43820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41819|iaag_maize : 343.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 224.0) no description available & (gnl|cdd|79510 : 95.8) no description available & (reliability: 872.0) & (original description: Putative UGT74G1, Description = UDP-glycosyltransferase 74G1, PFAM = PF00201)' T '17.8.1.1.5' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.SA glucosyltransferase ester and ether bond making SGE, SAG' 'niben101scf00788_192997-196866' '(at2g43820 : 440.0) Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and athranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F2 are not known, but mutant plants lacking UGT74F2 have a decreased level of SAG and SGE.; UDP-glucosyltransferase 74F2 (UGT74F2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 74 F1 (TAIR:AT2G43840.1); Has 8409 Blast hits to 8329 proteins in 546 species: Archae - 0; Bacteria - 818; Metazoa - 2323; Fungi - 31; Plants - 5038; Viruses - 125; Other Eukaryotes - 74 (source: NCBI BLink). & (q41819|iaag_maize : 357.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 224.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 880.0) & (original description: Putative UGT74F2, Description = UDP-glycosyltransferase 74F2, PFAM = PF00201)' T '17.8.1.1.5' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.SA glucosyltransferase ester and ether bond making SGE, SAG' 'niben101scf03012_308730-312538' '(at2g43840 : 434.0) UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside), benzoic acid, quercetin, and athranilate in vitro. UGT74F1 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F1 are not known, but mutant plants lacking UGT74F1 have a decreased level of salicylate glucoside.; UDP-glycosyltransferase 74 F1 (UGT74F1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 74F2 (TAIR:AT2G43820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41819|iaag_maize : 330.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 212.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 858.0) & (original description: Putative UGT74F1, Description = UDP-glycosyltransferase 74F1, PFAM = PF00201)' T '17.8.1.1.5' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.SA glucosyltransferase ester and ether bond making SGE, SAG' 'niben101scf05415_61553-65549' '(at2g43820 : 527.0) Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and athranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F2 are not known, but mutant plants lacking UGT74F2 have a decreased level of SAG and SGE.; UDP-glucosyltransferase 74F2 (UGT74F2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 74 F1 (TAIR:AT2G43840.1); Has 8409 Blast hits to 8329 proteins in 546 species: Archae - 0; Bacteria - 818; Metazoa - 2323; Fungi - 31; Plants - 5038; Viruses - 125; Other Eukaryotes - 74 (source: NCBI BLink). & (q41819|iaag_maize : 351.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 218.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 1054.0) & (original description: Putative UGT74F2, Description = UDP-glycosyltransferase 74F2, PFAM = PF00201)' T '17.8.1.1.6' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.SA methyltransferase' '' '' '17.8.1.1.7' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.methyl-SA methylesterase' 'nbv0.3scaffold3300_1054-6132' '(gnl|cdd|86349 : 376.0) no description available & (q9fyz9|bamt_antma : 253.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (at3g11480 : 249.0) The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism.; BSMT1; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 958 Blast hits to 946 proteins in 124 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 5; Plants - 736; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative CS3, Description = Probable caffeine synthase 3, PFAM = PF03492)' T '17.8.1.1.7' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.methyl-SA methylesterase' 'nbv0.3scaffold48654_1190-5846' '(gnl|cdd|86349 : 361.0) no description available & (q9fyz9|bamt_antma : 253.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (at4g36470 : 249.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G11480.1); Has 909 Blast hits to 891 proteins in 125 species: Archae - 0; Bacteria - 69; Metazoa - 9; Fungi - 5; Plants - 730; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative samt, Description = Salicylic acid carboxyl methyltransferase, PFAM = PF03492)' T '17.8.1.1.7' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.methyl-SA methylesterase' 'nbv0.5scaffold5153_4081-8558' '(gnl|cdd|86349 : 339.0) no description available & (at3g11480 : 202.0) The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism.; BSMT1; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 958 Blast hits to 946 proteins in 124 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 5; Plants - 736; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (q9fyz9|bamt_antma : 195.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 404.0) & (original description: Putative XMT1, Description = 7-methylxanthosine synthase 1, PFAM = PF03492)' T '17.8.1.1.7' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.methyl-SA methylesterase' 'niben101scf00536_1244071-1249499' '(gnl|cdd|86349 : 421.0) no description available & (at3g11480 : 295.0) The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism.; BSMT1; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 958 Blast hits to 946 proteins in 124 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 5; Plants - 736; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (q9fyz9|bamt_antma : 287.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 590.0) & (original description: Putative samt, Description = Salicylic acid carboxyl methyltransferase, PFAM = PF03492)' T '17.8.1.1.7' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.methyl-SA methylesterase' 'niben101scf01146_1201265-1205921' '(gnl|cdd|86349 : 254.0) no description available & (q9fyz9|bamt_antma : 183.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (at5g04370 : 180.0) A member of the Arabidopsis SABATH methyltransferase gene family. Encodes NAMT1, a methyltransferase that methylates nicotinic acid.; NAMT1; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G11480.1); Has 935 Blast hits to 920 proteins in 124 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 5; Plants - 729; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative samt, Description = Salicylic acid methyl transferase, PFAM = PF03492)' T '17.8.1.1.7' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.methyl-SA methylesterase' 'niben101scf01163_81954-86964' '(gnl|cdd|86349 : 373.0) no description available & (q9fyz9|bamt_antma : 311.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (at5g66430 : 292.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 582.0) & (original description: Putative samt, Description = Salicylic acid carboxyl methyltransferase, PFAM = PF03492)' T '17.8.1.1.7' 'hormone metabolism.salicylic acid.synthesis-degradation.synthesis.methyl-SA methylesterase' 'niben101scf14294_6747-11825' '(gnl|cdd|86349 : 364.0) no description available & (at5g66430 : 248.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9fyz9|bamt_antma : 239.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 494.0) & (original description: Putative XMT1, Description = 7-methylxanthosine synthase 1, PFAM = PF03492)' T '17.8.2' 'hormone metabolism.salicylic acid.signal transduction' '' '' '17.8.3' 'hormone metabolism.salicylic acid.induced-regulated-responsive-activated' '' '' '17.8.1001' 'hormone metabolism.salicylic acid.synthesis-degradation' 'salicylic acid-glucose' '' M '17.8.1002' 'hormone metabolism.salicylic acid.synthesis-degradation.Methylsalicylate' 'methylsalicylate' '' M '18' 'Co-factor and vitamine metabolism' 'nbv0.3scaffold44373_9289-15642' '(at3g21070 : 482.0) Encodes a protein with NAD(H) kinase activity.; NAD kinase 1 (NADK1); FUNCTIONS IN: NAD+ kinase activity, NADH kinase activity; INVOLVED IN: NADP biosynthetic process, response to virus, response to hydrogen peroxide, pyridine nucleotide biosynthetic process, response to ionizing radiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATP-NAD kinase, PpnK-type (InterPro:IPR016064), ATP-NAD/AcoX kinase (InterPro:IPR002504), ATP-NAD kinase, PpnK-type, all-beta (InterPro:IPR017437); BEST Arabidopsis thaliana protein match is: NAD kinase 2 (TAIR:AT1G21640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5jk52|nadk1_orysa : 480.0) Probable NAD kinase 1 (EC 2.7.1.23) - Oryza sativa (Rice) & (gnl|cdd|37389 : 302.0) no description available & (gnl|cdd|30410 : 200.0) no description available & (reliability: 964.0) & (original description: Putative NbNADK1, Description = NAD kinase, PFAM = PF01513)' T '18' 'Co-factor and vitamine metabolism' 'nbv0.3scaffold45678_5162-8079' '(at3g16050 : 437.0) Encodes a protein with pyridoxal phosphate synthase activity whose transcripts were detected mostly in roots and accumulate during senescence. The protein was found in very low abundance, which prevented a specific localisation.; pyridoxine biosynthesis 1.2 (PDX1.2); FUNCTIONS IN: protein heterodimerization activity; INVOLVED IN: pyridoxal phosphate biosynthetic process, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Vitamin B6 biosynthesis protein (InterPro:IPR001852), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT5G01410.1); Has 3117 Blast hits to 3111 proteins in 1095 species: Archae - 240; Bacteria - 1784; Metazoa - 13; Fungi - 157; Plants - 173; Viruses - 0; Other Eukaryotes - 750 (source: NCBI BLink). & (gnl|cdd|36819 : 419.0) no description available & (q39963|pdx1_hevbr : 405.0) Probable pyridoxin biosynthesis protein ER1 (PDX1 homolog) (Ethylene-inducible protein HEVER) - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|73389 : 377.0) no description available & (reliability: 818.0) & (original description: Putative PDX12, Description = Pyridoxal 5'-phosphate synthase-like subunit PDX1.2, PFAM = PF01680)' T '18' 'Co-factor and vitamine metabolism' 'nbv0.3scaffold51179_255-11453' '(at2g23420 : 952.0) nicotinate phosphoribosyltransferase 2 (NAPRT2); FUNCTIONS IN: nicotinate phosphoribosyltransferase activity; INVOLVED IN: pyridine nucleotide biosynthetic process, nicotinate nucleotide salvage; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicotinate phosphoribosyltransferase-related (InterPro:IPR007229), Nicotinate phosphoribosyltransferase putative (InterPro:IPR006405), Nicotinate phosphoribosyltransferase-like (InterPro:IPR015977); BEST Arabidopsis thaliana protein match is: nicotinate phosphoribosyltransferase 1 (TAIR:AT4G36940.1); Has 2998 Blast hits to 2961 proteins in 1361 species: Archae - 146; Bacteria - 2405; Metazoa - 184; Fungi - 41; Plants - 69; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink). & (gnl|cdd|37722 : 561.0) no description available & (gnl|cdd|29617 : 467.0) no description available & (reliability: 1904.0) & (original description: Putative NAPRT2, Description = Nicotinate phosphoribosyltransferase 2, PFAM = )' T '18' 'Co-factor and vitamine metabolism' 'nbv0.3scaffold92711_2391-5017' '(at2g25710 : 147.0) Encodes holocarboxylase synthase.; holocarboxylase synthase 1 (HCS1); FUNCTIONS IN: biotin-[acetyl-CoA-carboxylase] ligase activity, catalytic activity; INVOLVED IN: protein modification process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Biotin protein ligase, C-terminal (InterPro:IPR003142), Biotin/lipoate A/B protein ligase (InterPro:IPR004143), Biotin--acetyl-CoA-carboxylase ligase (InterPro:IPR004408); BEST Arabidopsis thaliana protein match is: holocarboxylase synthetase 2 (TAIR:AT1G37150.2); Has 6039 Blast hits to 6035 proteins in 2305 species: Archae - 225; Bacteria - 4034; Metazoa - 119; Fungi - 135; Plants - 62; Viruses - 0; Other Eukaryotes - 1464 (source: NCBI BLink). & (gnl|cdd|36749 : 101.0) no description available & (reliability: 294.0) & (original description: Putative hcs1, Description = Holocarboxylase synthetase 2, PFAM = PF03099)' T '18' 'Co-factor and vitamine metabolism' 'nbv0.5scaffold416_500989-509168' '(at2g46580 : 200.0) Pyridoxamine 5'-phosphate oxidase family protein; FUNCTIONS IN: FMN binding, pyridoxamine-phosphate oxidase activity; INVOLVED IN: oxidation reduction, pyridoxine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxamine 5'-phosphate oxidase (InterPro:IPR000659), FMN-binding split barrel (InterPro:IPR012349), Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain (InterPro:IPR011576), FMN-binding split barrel, related (InterPro:IPR009002); Has 1290 Blast hits to 1290 proteins in 309 species: Archae - 0; Bacteria - 510; Metazoa - 56; Fungi - 60; Plants - 40; Viruses - 0; Other Eukaryotes - 624 (source: NCBI BLink). & (gnl|cdd|39758 : 120.0) no description available & (gnl|cdd|34736 : 89.4) no description available & (reliability: 400.0) & (original description: Putative Os03g0115500, Description = Os03g0115500 protein, PFAM = PF12766)' T '18' 'Co-factor and vitamine metabolism' 'nbv0.5scaffold1321_53016-68250' '(at5g49970 : 685.0) encodes the bifunctional pyridoxine (pyridoxamine) 5í-phosphate oxidase (PPOX)(EC 1.4.3.5) that is involved in the formation of pyridoxal 5'-phosphate (member of the vitamin B6 group); pyridoxin (pyrodoxamine) 5'-phosphate oxidase (PPOX); CONTAINS InterPro DOMAIN/s: Pyridoxamine 5'-phosphate oxidase, rossman domain-containing, predicted, plant (InterPro:IPR021198), YjeF-related protein, N-terminal (InterPro:IPR004443), FMN-binding split barrel (InterPro:IPR012349), Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain (InterPro:IPR011576), FMN-binding split barrel, related (InterPro:IPR009002); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81689 : 273.0) no description available & (gnl|cdd|37797 : 256.0) no description available & (reliability: 1370.0) & (original description: Putative abp, Description = NAD(P)H-hydrate epimerase, PFAM = PF01243;PF10590;PF03853)' T '18' 'Co-factor and vitamine metabolism' 'nbv0.5scaffold1429_325463-336800' '(at2g23420 : 966.0) nicotinate phosphoribosyltransferase 2 (NAPRT2); FUNCTIONS IN: nicotinate phosphoribosyltransferase activity; INVOLVED IN: pyridine nucleotide biosynthetic process, nicotinate nucleotide salvage; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicotinate phosphoribosyltransferase-related (InterPro:IPR007229), Nicotinate phosphoribosyltransferase putative (InterPro:IPR006405), Nicotinate phosphoribosyltransferase-like (InterPro:IPR015977); BEST Arabidopsis thaliana protein match is: nicotinate phosphoribosyltransferase 1 (TAIR:AT4G36940.1); Has 2998 Blast hits to 2961 proteins in 1361 species: Archae - 146; Bacteria - 2405; Metazoa - 184; Fungi - 41; Plants - 69; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink). & (gnl|cdd|37722 : 566.0) no description available & (gnl|cdd|29617 : 477.0) no description available & (reliability: 1932.0) & (original description: Putative NAPRT2, Description = Nicotinate phosphoribosyltransferase 2, PFAM = )' T '18' 'Co-factor and vitamine metabolism' 'nbv0.5scaffold1632_232399-268734' '(at5g57300 : 140.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UbiE/COQ5 methyltransferase (InterPro:IPR004033); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G23360.1). & (gnl|cdd|36753 : 120.0) no description available & (gnl|cdd|32408 : 88.8) no description available & (reliability: 280.0) & (original description: Putative coq5, Description = 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial, PFAM = PF01209)' T '18' 'Co-factor and vitamine metabolism' 'nbv0.5scaffold6381_82661-94486' '(at5g60540 : 342.0) Encodes a protein predicted to function in tandem with PDX1 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis. PDX2 is predicted to function as glutaminase within the complex.; pyridoxine biosynthesis 2 (PDX2); CONTAINS InterPro DOMAIN/s: PdxT/SNO family, conserved site (InterPro:IPR021196), SNO glutamine amidotransferase (InterPro:IPR002161); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|28861 : 259.0) no description available & (gnl|cdd|38420 : 157.0) no description available & (reliability: 684.0) & (original description: Putative PDX2, Description = Probable pyridoxal 5'-phosphate synthase subunit PDX2, PFAM = PF01174)' T '18' 'Co-factor and vitamine metabolism' 'niben044scf00009503ctg005_6581-9044' '(at1g04640 : 169.0) Lipoyltransferase, located in mitochondria but not found in chloroplasts; lipoyltransferase 2 (LIP2); CONTAINS InterPro DOMAIN/s: Octanoyltransferase (InterPro:IPR000544), Octanoyltransferase, conserved site (InterPro:IPR020605), Biotin/lipoate A/B protein ligase (InterPro:IPR004143); BEST Arabidopsis thaliana protein match is: Biotin/lipoate A/B protein ligase family (TAIR:AT4G31050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35546 : 105.0) no description available & (gnl|cdd|30669 : 86.1) no description available & (reliability: 338.0) & (original description: Putative LIP2, Description = Octanoyltransferase, PFAM = PF03099)' T '18' 'Co-factor and vitamine metabolism' 'niben044scf00025844ctg003_27349-30275' '(q39963|pdx1_hevbr : 524.0) Probable pyridoxin biosynthesis protein ER1 (PDX1 homolog) (Ethylene-inducible protein HEVER) - Hevea brasiliensis (Para rubber tree) & (at5g01410 : 518.0) Encodes a protein predicted to function in tandem with PDX2 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis.; REDUCED SUGAR RESPONSE 4 (RSR4); FUNCTIONS IN: protein homodimerization activity, protein heterodimerization activity; INVOLVED IN: in 12 processes; LOCATED IN: cytosol, endomembrane system, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Vitamin B6 biosynthesis protein (InterPro:IPR001852), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: pyridoxine biosynthesis 1.1 (TAIR:AT2G38230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36819 : 504.0) no description available & (gnl|cdd|81311 : 489.0) no description available & (reliability: 1036.0) & (original description: Putative PDX13, Description = Pyridoxal 5'-phosphate synthase subunit PDX1.3, PFAM = PF01680)' T '18' 'Co-factor and vitamine metabolism' 'niben044scf00028002ctg000_1-8728' '(at5g49970 : 724.0) encodes the bifunctional pyridoxine (pyridoxamine) 5í-phosphate oxidase (PPOX)(EC 1.4.3.5) that is involved in the formation of pyridoxal 5'-phosphate (member of the vitamin B6 group); pyridoxin (pyrodoxamine) 5'-phosphate oxidase (PPOX); CONTAINS InterPro DOMAIN/s: Pyridoxamine 5'-phosphate oxidase, rossman domain-containing, predicted, plant (InterPro:IPR021198), YjeF-related protein, N-terminal (InterPro:IPR004443), FMN-binding split barrel (InterPro:IPR012349), Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain (InterPro:IPR011576), FMN-binding split barrel, related (InterPro:IPR009002); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81689 : 297.0) no description available & (gnl|cdd|37797 : 279.0) no description available & (reliability: 1448.0) & (original description: Putative PPOX1, Description = Pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic, PFAM = PF03853;PF01243;PF10590)' T '18' 'Co-factor and vitamine metabolism' 'niben044scf00029150ctg005_2406-9036' '(at4g31050 : 239.0) Biotin/lipoate A/B protein ligase family; FUNCTIONS IN: lipoyltransferase activity, octanoyltransferase activity, catalytic activity; INVOLVED IN: protein modification process, lipoate biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octanoyltransferase, conserved site (InterPro:IPR020605), Octanoyltransferase (InterPro:IPR000544), Biotin/lipoate A/B protein ligase (InterPro:IPR004143); BEST Arabidopsis thaliana protein match is: Biotin/lipoate A/B protein ligase family (TAIR:AT1G47578.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80443 : 150.0) no description available & (gnl|cdd|35546 : 107.0) no description available & (reliability: 478.0) & (original description: Putative lipB, Description = Octanoyltransferase, PFAM = )' T '18' 'Co-factor and vitamine metabolism' 'niben044scf00034976ctg001_40-6684' '(at5g60540 : 280.0) Encodes a protein predicted to function in tandem with PDX1 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis. PDX2 is predicted to function as glutaminase within the complex.; pyridoxine biosynthesis 2 (PDX2); CONTAINS InterPro DOMAIN/s: PdxT/SNO family, conserved site (InterPro:IPR021196), SNO glutamine amidotransferase (InterPro:IPR002161); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|28861 : 213.0) no description available & (gnl|cdd|38420 : 127.0) no description available & (reliability: 560.0) & (original description: Putative pdx2, Description = Pdx2, PFAM = PF01174)' T '18' 'Co-factor and vitamine metabolism' 'niben044scf00055034ctg001_12297-22835' '(at3g21070 : 489.0) Encodes a protein with NAD(H) kinase activity.; NAD kinase 1 (NADK1); FUNCTIONS IN: NAD+ kinase activity, NADH kinase activity; INVOLVED IN: NADP biosynthetic process, response to virus, response to hydrogen peroxide, pyridine nucleotide biosynthetic process, response to ionizing radiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATP-NAD kinase, PpnK-type (InterPro:IPR016064), ATP-NAD/AcoX kinase (InterPro:IPR002504), ATP-NAD kinase, PpnK-type, all-beta (InterPro:IPR017437); BEST Arabidopsis thaliana protein match is: NAD kinase 2 (TAIR:AT1G21640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5jk52|nadk1_orysa : 463.0) Probable NAD kinase 1 (EC 2.7.1.23) - Oryza sativa (Rice) & (gnl|cdd|37389 : 207.0) no description available & (gnl|cdd|85503 : 142.0) no description available & (reliability: 978.0) & (original description: Putative NADK1, Description = NAD(H) kinase 1, PFAM = PF01513)' T '18' 'Co-factor and vitamine metabolism' 'niben101scf00126_418924-626620' '(at1g37150 : 420.0) holocarboxylase synthetase 2 (HCS2); FUNCTIONS IN: biotin-[acetyl-CoA-carboxylase] ligase activity, catalytic activity; INVOLVED IN: protein modification process; EXPRESSED IN: pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Biotin protein ligase, C-terminal (InterPro:IPR003142), Biotin/lipoate A/B protein ligase (InterPro:IPR004143), Biotin--acetyl-CoA-carboxylase ligase (InterPro:IPR004408); BEST Arabidopsis thaliana protein match is: holocarboxylase synthase 1 (TAIR:AT2G25710.2); Has 6001 Blast hits to 6001 proteins in 2273 species: Archae - 223; Bacteria - 3976; Metazoa - 118; Fungi - 132; Plants - 62; Viruses - 0; Other Eukaryotes - 1490 (source: NCBI BLink). & (gnl|cdd|36749 : 300.0) no description available & (gnl|cdd|30688 : 135.0) no description available & (reliability: 840.0) & (original description: Putative HCS2, Description = Biotin--protein ligase 2, PFAM = PF03099;PF02237)' T '18' 'Co-factor and vitamine metabolism' 'niben101scf00509_344601-358471' '(at5g60540 : 338.0) Encodes a protein predicted to function in tandem with PDX1 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis. PDX2 is predicted to function as glutaminase within the complex.; pyridoxine biosynthesis 2 (PDX2); CONTAINS InterPro DOMAIN/s: PdxT/SNO family, conserved site (InterPro:IPR021196), SNO glutamine amidotransferase (InterPro:IPR002161); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|28861 : 256.0) no description available & (gnl|cdd|38420 : 157.0) no description available & (reliability: 676.0) & (original description: Putative PDX2, Description = Probable pyridoxal 5'-phosphate synthase subunit PDX2, PFAM = PF01174)' T '18' 'Co-factor and vitamine metabolism' 'niben101scf00573_553073-555999' '(q39963|pdx1_hevbr : 528.0) Probable pyridoxin biosynthesis protein ER1 (PDX1 homolog) (Ethylene-inducible protein HEVER) - Hevea brasiliensis (Para rubber tree) & (at5g01410 : 518.0) Encodes a protein predicted to function in tandem with PDX2 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis.; REDUCED SUGAR RESPONSE 4 (RSR4); FUNCTIONS IN: protein homodimerization activity, protein heterodimerization activity; INVOLVED IN: in 12 processes; LOCATED IN: cytosol, endomembrane system, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Vitamin B6 biosynthesis protein (InterPro:IPR001852), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: pyridoxine biosynthesis 1.1 (TAIR:AT2G38230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36819 : 506.0) no description available & (gnl|cdd|81311 : 490.0) no description available & (reliability: 1036.0) & (original description: Putative PDX13, Description = Pyridoxal 5'-phosphate synthase subunit PDX1.3, PFAM = PF01680)' T '18' 'Co-factor and vitamine metabolism' 'niben101scf00603_287370-295647' '(at2g46580 : 230.0) Pyridoxamine 5'-phosphate oxidase family protein; FUNCTIONS IN: FMN binding, pyridoxamine-phosphate oxidase activity; INVOLVED IN: oxidation reduction, pyridoxine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxamine 5'-phosphate oxidase (InterPro:IPR000659), FMN-binding split barrel (InterPro:IPR012349), Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain (InterPro:IPR011576), FMN-binding split barrel, related (InterPro:IPR009002); Has 1290 Blast hits to 1290 proteins in 309 species: Archae - 0; Bacteria - 510; Metazoa - 56; Fungi - 60; Plants - 40; Viruses - 0; Other Eukaryotes - 624 (source: NCBI BLink). & (gnl|cdd|39758 : 124.0) no description available & (gnl|cdd|34736 : 103.0) no description available & (reliability: 460.0) & (original description: Putative PPOX2, Description = Pyridoxine/pyridoxamine 5'-phosphate oxidase 2, PFAM = PF12766)' T '18' 'Co-factor and vitamine metabolism' 'niben101scf01802_215615-234033' '(at2g23420 : 964.0) nicotinate phosphoribosyltransferase 2 (NAPRT2); FUNCTIONS IN: nicotinate phosphoribosyltransferase activity; INVOLVED IN: pyridine nucleotide biosynthetic process, nicotinate nucleotide salvage; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicotinate phosphoribosyltransferase-related (InterPro:IPR007229), Nicotinate phosphoribosyltransferase putative (InterPro:IPR006405), Nicotinate phosphoribosyltransferase-like (InterPro:IPR015977); BEST Arabidopsis thaliana protein match is: nicotinate phosphoribosyltransferase 1 (TAIR:AT4G36940.1); Has 2998 Blast hits to 2961 proteins in 1361 species: Archae - 146; Bacteria - 2405; Metazoa - 184; Fungi - 41; Plants - 69; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink). & (gnl|cdd|37722 : 562.0) no description available & (gnl|cdd|29617 : 477.0) no description available & (reliability: 1928.0) & (original description: Putative NAPRT2, Description = Nicotinate phosphoribosyltransferase 2, PFAM = )' T '18' 'Co-factor and vitamine metabolism' 'niben101scf01922_858283-871659' '(at1g04620 : 791.0) coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family; FUNCTIONS IN: coenzyme F420 hydrogenase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal (InterPro:IPR007525), Coenzyme F420 hydrogenase/dehydrogenase beta subunit, N-terminal (InterPro:IPR007516); Has 499 Blast hits to 498 proteins in 165 species: Archae - 202; Bacteria - 188; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|31238 : 185.0) no description available & (reliability: 1582.0) & (original description: Putative HCAR, Description = 7-hydroxymethyl chlorophyll a reductase, chloroplastic, PFAM = PF04432;PF04422)' T '18' 'Co-factor and vitamine metabolism' 'niben101scf03687_67139-97387' '(at2g01350 : 509.0) At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.; quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5862 Blast hits to 5862 proteins in 1918 species: Archae - 184; Bacteria - 3596; Metazoa - 59; Fungi - 124; Plants - 57; Viruses - 0; Other Eukaryotes - 1842 (source: NCBI BLink). & (gnl|cdd|38218 : 326.0) no description available & (gnl|cdd|29619 : 321.0) no description available & (reliability: 1018.0) & (original description: Putative nadC, Description = Nicotinate-nucleotide pyrophosphorylase, PFAM = PF01729;PF02749)' T '18' 'Co-factor and vitamine metabolism' 'niben101scf03687_140113-148260' '(at2g01350 : 492.0) At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.; quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5862 Blast hits to 5862 proteins in 1918 species: Archae - 184; Bacteria - 3596; Metazoa - 59; Fungi - 124; Plants - 57; Viruses - 0; Other Eukaryotes - 1842 (source: NCBI BLink). & (gnl|cdd|38218 : 336.0) no description available & (gnl|cdd|29619 : 328.0) no description available & (reliability: 984.0) & (original description: Putative QPT, Description = Nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic, PFAM = PF01729;PF02749)' T '18' 'Co-factor and vitamine metabolism' 'niben101scf04107_161729-165492' '(at1g47578 : 357.0) Biotin/lipoate A/B protein ligase family; FUNCTIONS IN: octanoyltransferase activity, catalytic activity; INVOLVED IN: protein modification process, lipoate biosynthetic process; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Octanoyltransferase, conserved site (InterPro:IPR020605), Octanoyltransferase (InterPro:IPR000544), Biotin/lipoate A/B protein ligase (InterPro:IPR004143); BEST Arabidopsis thaliana protein match is: Biotin/lipoate A/B protein ligase family (TAIR:AT4G31050.1). & (gnl|cdd|80443 : 231.0) no description available & (gnl|cdd|35546 : 179.0) no description available & (reliability: 704.0) & (original description: Putative lipB, Description = Lipoate-protein ligase B, PFAM = PF03099)' T '18' 'Co-factor and vitamine metabolism' 'niben101scf04489_66610-69805' '(at3g16050 : 431.0) Encodes a protein with pyridoxal phosphate synthase activity whose transcripts were detected mostly in roots and accumulate during senescence. The protein was found in very low abundance, which prevented a specific localisation.; pyridoxine biosynthesis 1.2 (PDX1.2); FUNCTIONS IN: protein heterodimerization activity; INVOLVED IN: pyridoxal phosphate biosynthetic process, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Vitamin B6 biosynthesis protein (InterPro:IPR001852), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT5G01410.1); Has 3117 Blast hits to 3111 proteins in 1095 species: Archae - 240; Bacteria - 1784; Metazoa - 13; Fungi - 157; Plants - 173; Viruses - 0; Other Eukaryotes - 750 (source: NCBI BLink). & (gnl|cdd|36819 : 413.0) no description available & (q39963|pdx1_hevbr : 397.0) Probable pyridoxin biosynthesis protein ER1 (PDX1 homolog) (Ethylene-inducible protein HEVER) - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|73389 : 369.0) no description available & (reliability: 806.0) & (original description: Putative pdxS, Description = Pyridoxal 5'-phosphate synthase subunit PdxS, PFAM = PF01680)' T '18' 'Co-factor and vitamine metabolism' 'niben101scf04654_472078-478687' '(at5g49970 : 565.0) encodes the bifunctional pyridoxine (pyridoxamine) 5í-phosphate oxidase (PPOX)(EC 1.4.3.5) that is involved in the formation of pyridoxal 5'-phosphate (member of the vitamin B6 group); pyridoxin (pyrodoxamine) 5'-phosphate oxidase (PPOX); CONTAINS InterPro DOMAIN/s: Pyridoxamine 5'-phosphate oxidase, rossman domain-containing, predicted, plant (InterPro:IPR021198), YjeF-related protein, N-terminal (InterPro:IPR004443), FMN-binding split barrel (InterPro:IPR012349), Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain (InterPro:IPR011576), FMN-binding split barrel, related (InterPro:IPR009002); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37796 : 242.0) no description available & (gnl|cdd|81689 : 231.0) no description available & (reliability: 1130.0) & (original description: Putative PPOX1, Description = Pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic, PFAM = PF03853;PF01243;PF10590)' T '18' 'Co-factor and vitamine metabolism' 'niben101scf04788_137676-144040' '(at2g01350 : 495.0) At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.; quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5862 Blast hits to 5862 proteins in 1918 species: Archae - 184; Bacteria - 3596; Metazoa - 59; Fungi - 124; Plants - 57; Viruses - 0; Other Eukaryotes - 1842 (source: NCBI BLink). & (gnl|cdd|38218 : 334.0) no description available & (gnl|cdd|29619 : 328.0) no description available & (reliability: 990.0) & (original description: Putative qpt2, Description = Quinolinate phosphoribosyltransferase, PFAM = PF02749;PF01729)' T '18' 'Co-factor and vitamine metabolism' 'niben101scf04869_358269-371164' '(at3g21070 : 669.0) Encodes a protein with NAD(H) kinase activity.; NAD kinase 1 (NADK1); FUNCTIONS IN: NAD+ kinase activity, NADH kinase activity; INVOLVED IN: NADP biosynthetic process, response to virus, response to hydrogen peroxide, pyridine nucleotide biosynthetic process, response to ionizing radiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATP-NAD kinase, PpnK-type (InterPro:IPR016064), ATP-NAD/AcoX kinase (InterPro:IPR002504), ATP-NAD kinase, PpnK-type, all-beta (InterPro:IPR017437); BEST Arabidopsis thaliana protein match is: NAD kinase 2 (TAIR:AT1G21640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5jk52|nadk1_orysa : 645.0) Probable NAD kinase 1 (EC 2.7.1.23) - Oryza sativa (Rice) & (gnl|cdd|37389 : 323.0) no description available & (gnl|cdd|30410 : 209.0) no description available & (reliability: 1338.0) & (original description: Putative NADK1, Description = NAD(H) kinase 1, PFAM = PF01513)' T '18' 'Co-factor and vitamine metabolism' 'niben101scf05799_199402-202291' '(at4g31050 : 354.0) Biotin/lipoate A/B protein ligase family; FUNCTIONS IN: lipoyltransferase activity, octanoyltransferase activity, catalytic activity; INVOLVED IN: protein modification process, lipoate biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octanoyltransferase, conserved site (InterPro:IPR020605), Octanoyltransferase (InterPro:IPR000544), Biotin/lipoate A/B protein ligase (InterPro:IPR004143); BEST Arabidopsis thaliana protein match is: Biotin/lipoate A/B protein ligase family (TAIR:AT1G47578.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80443 : 229.0) no description available & (gnl|cdd|35546 : 182.0) no description available & (reliability: 708.0) & (original description: Putative lipB, Description = Lipoate-protein ligase B, PFAM = PF03099)' T '18' 'Co-factor and vitamine metabolism' 'niben101scf06725_110139-123242' '(at5g55810 : 324.0) encodes a bi-functional enzyme that expresses both nicotinamide-nucleotide adenylyltransferase (2.7.7.1) and nicotinate-nucleotide adenylyltransferase (2.7.7.18)activity.; nicotinate/nicotinamide mononucleotide adenyltransferase (NMNAT); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Probable nicotinate-nucleotide adenylyltransferase (InterPro:IPR005248), Cytidylyltransferase (InterPro:IPR004820). & (gnl|cdd|38409 : 249.0) no description available & (gnl|cdd|28827 : 162.0) no description available & (reliability: 648.0) & (original description: Putative NMNAT, Description = Nicotinamide/nicotinic acid mononucleotide adenylyltransferase, PFAM = PF01467)' T '18' 'Co-factor and vitamine metabolism' 'niben101scf06869_218433-221137' '(at1g04640 : 354.0) Lipoyltransferase, located in mitochondria but not found in chloroplasts; lipoyltransferase 2 (LIP2); CONTAINS InterPro DOMAIN/s: Octanoyltransferase (InterPro:IPR000544), Octanoyltransferase, conserved site (InterPro:IPR020605), Biotin/lipoate A/B protein ligase (InterPro:IPR004143); BEST Arabidopsis thaliana protein match is: Biotin/lipoate A/B protein ligase family (TAIR:AT4G31050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35546 : 214.0) no description available & (gnl|cdd|80443 : 182.0) no description available & (reliability: 708.0) & (original description: Putative LIP2, Description = Octanoyltransferase, PFAM = PF03099)' T '18' 'Co-factor and vitamine metabolism' 'niben101scf07162_353714-372358' '(at5g49970 : 725.0) encodes the bifunctional pyridoxine (pyridoxamine) 5í-phosphate oxidase (PPOX)(EC 1.4.3.5) that is involved in the formation of pyridoxal 5'-phosphate (member of the vitamin B6 group); pyridoxin (pyrodoxamine) 5'-phosphate oxidase (PPOX); CONTAINS InterPro DOMAIN/s: Pyridoxamine 5'-phosphate oxidase, rossman domain-containing, predicted, plant (InterPro:IPR021198), YjeF-related protein, N-terminal (InterPro:IPR004443), FMN-binding split barrel (InterPro:IPR012349), Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain (InterPro:IPR011576), FMN-binding split barrel, related (InterPro:IPR009002); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81689 : 297.0) no description available & (gnl|cdd|37797 : 282.0) no description available & (reliability: 1450.0) & (original description: Putative PPOX1, Description = Pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic, PFAM = PF01243;PF03853;PF10590)' T '18' 'Co-factor and vitamine metabolism' 'niben101scf11379_95777-106168' '(at5g57300 : 437.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UbiE/COQ5 methyltransferase (InterPro:IPR004033); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G23360.1). & (gnl|cdd|36753 : 364.0) no description available & (gnl|cdd|80578 : 297.0) no description available & (reliability: 874.0) & (original description: Putative COQ5, Description = 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial, PFAM = PF01209)' T '18.1' 'Co-factor and vitamine metabolism.molybdenum cofactor' 'nbv0.3scaffold37994_1-7319' '(at1g30910 : 389.0) Molybdenum cofactor sulfurase family protein; FUNCTIONS IN: molybdenum ion binding, Mo-molybdopterin cofactor sulfurase activity, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), MOSC, N-terminal beta barrel (InterPro:IPR005303), Molybdenum cofactor sulfurase, C-terminal (InterPro:IPR005302); BEST Arabidopsis thaliana protein match is: Molybdenum cofactor sulfurase family protein (TAIR:AT5G44720.1); Has 1932 Blast hits to 1913 proteins in 692 species: Archae - 10; Bacteria - 1072; Metazoa - 332; Fungi - 283; Plants - 100; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|37573 : 303.0) no description available & (gnl|cdd|33030 : 152.0) no description available & (q655r6|mocos_orysa : 131.0) Molybdenum cofactor sulfurase (EC 4.4.-.-) (MoCo sulfurase) (MOS) - Oryza sativa (Rice) & (reliability: 718.0) & (original description: Putative ARC, Description = Mo-molybdopterin cofactor sulfurase, PFAM = PF03473;PF03476)' T '18.1' 'Co-factor and vitamine metabolism.molybdenum cofactor' 'niben101scf00023_656443-663136' '(at5g55130 : 642.0) putative molybdopterin synthase sulphurylase (cnx5); "co-factor for nitrate, reductase and xanthine dehydrogenase 5" (CNX5); FUNCTIONS IN: Mo-molybdopterin cofactor sulfurase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040), MoeZ/MoeB (InterPro:IPR007901); BEST Arabidopsis thaliana protein match is: SUMO-activating enzyme 2 (TAIR:AT2G21470.2); Has 14042 Blast hits to 14039 proteins in 2395 species: Archae - 240; Bacteria - 9204; Metazoa - 714; Fungi - 607; Plants - 341; Viruses - 0; Other Eukaryotes - 2936 (source: NCBI BLink). & (gnl|cdd|37228 : 514.0) no description available & (gnl|cdd|30111 : 333.0) no description available & (reliability: 1284.0) & (original description: Putative MOCS3, Description = Adenylyltransferase and sulfurtransferase MOCS3, PFAM = PF00581;PF00899)' T '18.1' 'Co-factor and vitamine metabolism.molybdenum cofactor' 'niben101scf00571_1103866-1106395' '(at5g44720 : 164.0) Molybdenum cofactor sulfurase family protein; FUNCTIONS IN: molybdenum ion binding, Mo-molybdopterin cofactor sulfurase activity, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), MOSC, N-terminal beta barrel (InterPro:IPR005303), Molybdenum cofactor sulfurase, C-terminal (InterPro:IPR005302); BEST Arabidopsis thaliana protein match is: Molybdenum cofactor sulfurase family protein (TAIR:AT1G30910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37573 : 121.0) no description available & (gnl|cdd|86342 : 98.4) no description available & (reliability: 328.0) & (original description: Putative MCSU1, Description = Mo-molybdopterin cofactor sulfurase, PFAM = PF03476)' T '18.1' 'Co-factor and vitamine metabolism.molybdenum cofactor' 'niben101scf00603_46706-50037' '(at1g01290 : 250.0) COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 3. Encodes a protein involved in molybdenum cofactor biosynthesis. Homologous to E.coli MoaC. Expression is low in all tissues examined, except in roots. Appears to have targeting signals for chloroplast or mitochondria; cofactor of nitrate reductase and xanthine dehydrogenase 3 (CNX3); CONTAINS InterPro DOMAIN/s: Molybdopterin cofactor biosynthesis C (MoaC) domain (InterPro:IPR002820); Has 5242 Blast hits to 5240 proteins in 1916 species: Archae - 213; Bacteria - 3669; Metazoa - 104; Fungi - 75; Plants - 45; Viruses - 0; Other Eukaryotes - 1136 (source: NCBI BLink). & (gnl|cdd|82955 : 212.0) no description available & (gnl|cdd|38087 : 152.0) no description available & (reliability: 500.0) & (original description: Putative CNX3, Description = Cyclic pyranopterin monophosphate synthase accessory protein, mitochondrial, PFAM = PF01967)' T '18.1' 'Co-factor and vitamine metabolism.molybdenum cofactor' 'niben101scf07937_355770-358351' '(at2g43760 : 225.0) molybdopterin biosynthesis MoaE family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: Mo-molybdopterin cofactor biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molybdopterin biosynthesis MoaE (InterPro:IPR003448); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38517 : 196.0) no description available & (gnl|cdd|58647 : 159.0) no description available & (reliability: 450.0) & (original description: Putative MOCS2, Description = Molybdopterin synthase catalytic subunit, PFAM = PF02391)' T '18.1' 'Co-factor and vitamine metabolism.molybdenum cofactor' 'niben101scf08446_66120-72954' '(at4g10100 : 97.1) molybdenum cofactor synthesis family protein, similar to Molybdenum cofactor synthesis protein 2 small subunit (Molybdopterin- synthase small subunit) (MOCS2A) (MOCO1-A) (Swiss-Prot:O96033) (Homo sapiens); contains TIGRFAM TIGR01682: molybdopterin converting factor, subunit 1; sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.; "co-factor for nitrate, reductase and xanthine dehydrogenase 7" (CNX7); CONTAINS InterPro DOMAIN/s: ThiamineS (InterPro:IPR003749), Molybdopterin converting factor, subunit 1 (InterPro:IPR010034), Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp (InterPro:IPR016155), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); Has 1000 Blast hits to 1000 proteins in 381 species: Archae - 21; Bacteria - 814; Metazoa - 52; Fungi - 2; Plants - 54; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|29161 : 83.0) no description available & (gnl|cdd|38684 : 81.6) no description available & (reliability: 194.2) & (original description: Putative VP15, Description = Molybdopterin synthase sulfur carrier subunit, PFAM = PF02597)' T '18.1' 'Co-factor and vitamine metabolism.molybdenum cofactor' 'niben101scf08755_315811-321896' '(at1g30910 : 427.0) Molybdenum cofactor sulfurase family protein; FUNCTIONS IN: molybdenum ion binding, Mo-molybdopterin cofactor sulfurase activity, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), MOSC, N-terminal beta barrel (InterPro:IPR005303), Molybdenum cofactor sulfurase, C-terminal (InterPro:IPR005302); BEST Arabidopsis thaliana protein match is: Molybdenum cofactor sulfurase family protein (TAIR:AT5G44720.1); Has 1932 Blast hits to 1913 proteins in 692 species: Archae - 10; Bacteria - 1072; Metazoa - 332; Fungi - 283; Plants - 100; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|37573 : 326.0) no description available & (gnl|cdd|33030 : 167.0) no description available & (q655r6|mocos_orysa : 126.0) Molybdenum cofactor sulfurase (EC 4.4.-.-) (MoCo sulfurase) (MOS) - Oryza sativa (Rice) & (reliability: 812.0) & (original description: Putative ARC, Description = MOSC domain-containing protein, PFAM = PF03473;PF03476)' T '18.1.1' 'Co-factor and vitamine metabolism.molybdenum cofactor.gephyrin' 'nbv0.3scaffold34259_1-15921' '(at5g20990 : 831.0) Involved in molybdenum cofactor (Moco) biosynthesis, inserting Mo into Molybdopterin. sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.; B73; CONTAINS InterPro DOMAIN/s: Molybdenum cofactor biosynthesis, conserved site (InterPro:IPR008284), Molybdenum cofactor synthesis (InterPro:IPR020817), MoeA, N-terminal and linker domain (InterPro:IPR005110), MoeA, C-terminal, domain IV (InterPro:IPR005111), Molybdopterin binding (InterPro:IPR001453); Has 13106 Blast hits to 12710 proteins in 1951 species: Archae - 648; Bacteria - 8919; Metazoa - 385; Fungi - 192; Plants - 74; Viruses - 0; Other Eukaryotes - 2888 (source: NCBI BLink). & (gnl|cdd|58168 : 390.0) no description available & (gnl|cdd|37582 : 241.0) no description available & (reliability: 1662.0) & (original description: Putative CNX1, Description = Molybdopterin biosynthesis protein CNX1, PFAM = PF00994;PF00994;PF03454;PF03453)' T '18.1.1' 'Co-factor and vitamine metabolism.molybdenum cofactor.gephyrin' 'niben101scf00862_160538-187759' '(at5g20990 : 858.0) Involved in molybdenum cofactor (Moco) biosynthesis, inserting Mo into Molybdopterin. sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.; B73; CONTAINS InterPro DOMAIN/s: Molybdenum cofactor biosynthesis, conserved site (InterPro:IPR008284), Molybdenum cofactor synthesis (InterPro:IPR020817), MoeA, N-terminal and linker domain (InterPro:IPR005110), MoeA, C-terminal, domain IV (InterPro:IPR005111), Molybdopterin binding (InterPro:IPR001453); Has 13106 Blast hits to 12710 proteins in 1951 species: Archae - 648; Bacteria - 8919; Metazoa - 385; Fungi - 192; Plants - 74; Viruses - 0; Other Eukaryotes - 2888 (source: NCBI BLink). & (gnl|cdd|58168 : 385.0) no description available & (gnl|cdd|37582 : 244.0) no description available & (reliability: 1716.0) & (original description: Putative CNX1, Description = Molybdopterin biosynthesis protein CNX1, PFAM = PF03453;PF03454;PF00994;PF00994)' T '18.2' 'Co-factor and vitamine metabolism.thiamine' 'nbv0.3scaffold38713_1-6518' '(at2g29630 : 1159.0) thiaminC (THIC); CONTAINS InterPro DOMAIN/s: Thiamine biosynthesis protein ThiC (InterPro:IPR002817). & (gnl|cdd|82913 : 783.0) no description available & (reliability: 2318.0) & (original description: Putative thiC, Description = Phosphomethylpyrimidine synthase, PFAM = PF01964;PF13667)' T '18.2' 'Co-factor and vitamine metabolism.thiamine' 'niben101scf02842_74140-79508' '(at3g24030 : 312.0) hydroxyethylthiazole kinase family protein; FUNCTIONS IN: catalytic activity, hydroxyethylthiazole kinase activity; INVOLVED IN: thiamin biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hydroxyethylthiazole kinase (InterPro:IPR000417), Hydroxyethylthiazole kinase, monofunctional (InterPro:IPR011144); Has 2753 Blast hits to 2753 proteins in 1214 species: Archae - 124; Bacteria - 2340; Metazoa - 2; Fungi - 135; Plants - 43; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (gnl|cdd|29354 : 282.0) no description available & (reliability: 624.0) & (original description: Putative THIM, Description = Hydroxyethylthiazole kinase, PFAM = PF02110)' T '18.2' 'Co-factor and vitamine metabolism.thiamine' 'niben101scf11490_32963-37724' '(o23787|thi4_citsi : 523.0) Thiazole biosynthetic enzyme, chloroplast precursor - Citrus sinensis (Sweet orange) & (at5g54770 : 511.0) Encodes a thiamine biosynthetic gene that has a dual function in thiamine biosynthesis and mitochondrial DNA damage tolerance. It appears to be involved in producing the thiazole portion of thiamine (vitamin B1). A crystal structure of the protein reveals that it forms a 2-ring homo-octamer.; THI1; FUNCTIONS IN: protein homodimerization activity, zinc ion binding; INVOLVED IN: oxazole or thiazole biosynthetic process, response to cold, thiamin biosynthetic process, response to DNA damage stimulus; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiamine biosynthesis Thi4 protein (InterPro:IPR002922); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38171 : 456.0) no description available & (gnl|cdd|85789 : 341.0) no description available & (reliability: 1022.0) & (original description: Putative THI1, Description = Thiamine thiazole synthase, chloroplastic, PFAM = PF01946)' T '18.2' 'Co-factor and vitamine metabolism.thiamine' 'niben101scf11724_143636-148173' '(o23787|thi4_citsi : 526.0) Thiazole biosynthetic enzyme, chloroplast precursor - Citrus sinensis (Sweet orange) & (at5g54770 : 513.0) Encodes a thiamine biosynthetic gene that has a dual function in thiamine biosynthesis and mitochondrial DNA damage tolerance. It appears to be involved in producing the thiazole portion of thiamine (vitamin B1). A crystal structure of the protein reveals that it forms a 2-ring homo-octamer.; THI1; FUNCTIONS IN: protein homodimerization activity, zinc ion binding; INVOLVED IN: oxazole or thiazole biosynthetic process, response to cold, thiamin biosynthetic process, response to DNA damage stimulus; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiamine biosynthesis Thi4 protein (InterPro:IPR002922); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38171 : 457.0) no description available & (gnl|cdd|85789 : 343.0) no description available & (reliability: 1026.0) & (original description: Putative thi2, Description = Thiamine thiazole synthase, PFAM = PF01946)' T '18.2' 'Co-factor and vitamine metabolism.thiamine' 'niben101scf12676_94554-100802' '(at2g29630 : 1158.0) thiaminC (THIC); CONTAINS InterPro DOMAIN/s: Thiamine biosynthesis protein ThiC (InterPro:IPR002817). & (gnl|cdd|82913 : 783.0) no description available & (reliability: 2316.0) & (original description: Putative THIC, Description = Phosphomethylpyrimidine synthase, chloroplastic, PFAM = PF13667;PF01964)' T '18.2.1' 'Co-factor and vitamine metabolism.thiamine.thiamine diphosphokinase' 'niben101scf00712_485530-502353' '(at2g44750 : 377.0) Encodes a thiamine pyrophosphokinase capable of producing thiamine pyrophosphate from free thiamine.; thiamin pyrophosphokinase 2 (TPK2); CONTAINS InterPro DOMAIN/s: Thiamin pyrophosphokinase, vitamin B1-binding domain (InterPro:IPR007373), Thiamin pyrophosphokinase, eukaryotic (InterPro:IPR016966), Thiamin pyrophosphokinase (InterPro:IPR006282), Thiamin pyrophosphokinase, catalytic domain (InterPro:IPR007371); BEST Arabidopsis thaliana protein match is: thiamin pyrophosphokinase1 (TAIR:AT1G02880.3); Has 1352 Blast hits to 1350 proteins in 558 species: Archae - 0; Bacteria - 721; Metazoa - 134; Fungi - 134; Plants - 93; Viruses - 0; Other Eukaryotes - 270 (source: NCBI BLink). & (gnl|cdd|38363 : 258.0) no description available & (gnl|cdd|31752 : 106.0) no description available & (reliability: 754.0) & (original description: Putative TPK1, Description = Thiamine pyrophosphokinase 1, PFAM = PF04265;PF04263)' T '18.2.1' 'Co-factor and vitamine metabolism.thiamine.thiamine diphosphokinase' 'niben101scf01369_379655-392564' '(at2g44750 : 357.0) Encodes a thiamine pyrophosphokinase capable of producing thiamine pyrophosphate from free thiamine.; thiamin pyrophosphokinase 2 (TPK2); CONTAINS InterPro DOMAIN/s: Thiamin pyrophosphokinase, vitamin B1-binding domain (InterPro:IPR007373), Thiamin pyrophosphokinase, eukaryotic (InterPro:IPR016966), Thiamin pyrophosphokinase (InterPro:IPR006282), Thiamin pyrophosphokinase, catalytic domain (InterPro:IPR007371); BEST Arabidopsis thaliana protein match is: thiamin pyrophosphokinase1 (TAIR:AT1G02880.3); Has 1352 Blast hits to 1350 proteins in 558 species: Archae - 0; Bacteria - 721; Metazoa - 134; Fungi - 134; Plants - 93; Viruses - 0; Other Eukaryotes - 270 (source: NCBI BLink). & (gnl|cdd|38363 : 256.0) no description available & (gnl|cdd|31752 : 103.0) no description available & (reliability: 714.0) & (original description: Putative TPK1, Description = Thiamine pyrophosphokinase 1, PFAM = PF04265;PF04263)' T '18.2.2' 'Co-factor and vitamine metabolism.thiamine.hydroxymethylpyrimidine kinase' 'nbv0.3scaffold7047_33357-57568' '(at1g22940 : 185.0) Encodes a bifunctional enzyme required for thiamine (vitamin B1) biosynthesis. TH1 can phosphorylate HMP-P to produce HMP-PP, the pyrimidine heterocyclic subunit of thiamine. TH1 also catalyzes the condensation of HMP-PP and HET to form thiamine monophosphate (TMP). TH1 also appears capable of phosphorylating HMP based on E.coli mutant complementation assays. th1 mutants are thiamine auxotrophs that die as seedlings on unsupplemented media.; THIAMINE REQUIRING 1 (TH1); FUNCTIONS IN: phosphomethylpyrimidine kinase activity, thiamin-phosphate diphosphorylase activity, hydroxymethylpyrimidine kinase activity; INVOLVED IN: thiamin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiamine monophosphate synthase (InterPro:IPR003733), Phosphomethylpyrimidine kinase type-2 (InterPro:IPR004399), Aldolase-type TIM barrel (InterPro:IPR013785), Phosphomethylpyrimidine kinase type-1 (InterPro:IPR013749); Has 15989 Blast hits to 15891 proteins in 2548 species: Archae - 338; Bacteria - 12149; Metazoa - 165; Fungi - 331; Plants - 107; Viruses - 0; Other Eukaryotes - 2899 (source: NCBI BLink). & (gnl|cdd|86036 : 147.0) no description available & (reliability: 370.0) & (original description: Putative th1, Description = Thiamine-phosphate pyrophosphorylase, PFAM = PF02581)' T '18.2.2' 'Co-factor and vitamine metabolism.thiamine.hydroxymethylpyrimidine kinase' 'nbv0.5scaffold7197_46657-71723' '(at1g22940 : 179.0) Encodes a bifunctional enzyme required for thiamine (vitamin B1) biosynthesis. TH1 can phosphorylate HMP-P to produce HMP-PP, the pyrimidine heterocyclic subunit of thiamine. TH1 also catalyzes the condensation of HMP-PP and HET to form thiamine monophosphate (TMP). TH1 also appears capable of phosphorylating HMP based on E.coli mutant complementation assays. th1 mutants are thiamine auxotrophs that die as seedlings on unsupplemented media.; THIAMINE REQUIRING 1 (TH1); FUNCTIONS IN: phosphomethylpyrimidine kinase activity, thiamin-phosphate diphosphorylase activity, hydroxymethylpyrimidine kinase activity; INVOLVED IN: thiamin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiamine monophosphate synthase (InterPro:IPR003733), Phosphomethylpyrimidine kinase type-2 (InterPro:IPR004399), Aldolase-type TIM barrel (InterPro:IPR013785), Phosphomethylpyrimidine kinase type-1 (InterPro:IPR013749); Has 15989 Blast hits to 15891 proteins in 2548 species: Archae - 338; Bacteria - 12149; Metazoa - 165; Fungi - 331; Plants - 107; Viruses - 0; Other Eukaryotes - 2899 (source: NCBI BLink). & (gnl|cdd|86036 : 143.0) no description available & (reliability: 358.0) & (original description: Putative th1, Description = TP synthase, PFAM = PF02581)' T '18.2.2' 'Co-factor and vitamine metabolism.thiamine.hydroxymethylpyrimidine kinase' 'niben044scf00001404ctg029_1-2700' '(at1g22940 : 325.0) Encodes a bifunctional enzyme required for thiamine (vitamin B1) biosynthesis. TH1 can phosphorylate HMP-P to produce HMP-PP, the pyrimidine heterocyclic subunit of thiamine. TH1 also catalyzes the condensation of HMP-PP and HET to form thiamine monophosphate (TMP). TH1 also appears capable of phosphorylating HMP based on E.coli mutant complementation assays. th1 mutants are thiamine auxotrophs that die as seedlings on unsupplemented media.; THIAMINE REQUIRING 1 (TH1); FUNCTIONS IN: phosphomethylpyrimidine kinase activity, thiamin-phosphate diphosphorylase activity, hydroxymethylpyrimidine kinase activity; INVOLVED IN: thiamin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiamine monophosphate synthase (InterPro:IPR003733), Phosphomethylpyrimidine kinase type-2 (InterPro:IPR004399), Aldolase-type TIM barrel (InterPro:IPR013785), Phosphomethylpyrimidine kinase type-1 (InterPro:IPR013749); Has 15989 Blast hits to 15891 proteins in 2548 species: Archae - 338; Bacteria - 12149; Metazoa - 165; Fungi - 331; Plants - 107; Viruses - 0; Other Eukaryotes - 2899 (source: NCBI BLink). & (gnl|cdd|73367 : 206.0) no description available & (gnl|cdd|37809 : 138.0) no description available & (reliability: 650.0) & (original description: Putative thiE, Description = Thiamine-phosphate synthase, PFAM = PF02581)' T '18.2.2' 'Co-factor and vitamine metabolism.thiamine.hydroxymethylpyrimidine kinase' 'niben101scf01970_960207-971024' '(at1g22940 : 718.0) Encodes a bifunctional enzyme required for thiamine (vitamin B1) biosynthesis. TH1 can phosphorylate HMP-P to produce HMP-PP, the pyrimidine heterocyclic subunit of thiamine. TH1 also catalyzes the condensation of HMP-PP and HET to form thiamine monophosphate (TMP). TH1 also appears capable of phosphorylating HMP based on E.coli mutant complementation assays. th1 mutants are thiamine auxotrophs that die as seedlings on unsupplemented media.; THIAMINE REQUIRING 1 (TH1); FUNCTIONS IN: phosphomethylpyrimidine kinase activity, thiamin-phosphate diphosphorylase activity, hydroxymethylpyrimidine kinase activity; INVOLVED IN: thiamin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiamine monophosphate synthase (InterPro:IPR003733), Phosphomethylpyrimidine kinase type-2 (InterPro:IPR004399), Aldolase-type TIM barrel (InterPro:IPR013785), Phosphomethylpyrimidine kinase type-1 (InterPro:IPR013749); Has 15989 Blast hits to 15891 proteins in 2548 species: Archae - 338; Bacteria - 12149; Metazoa - 165; Fungi - 331; Plants - 107; Viruses - 0; Other Eukaryotes - 2899 (source: NCBI BLink). & (gnl|cdd|37809 : 449.0) no description available & (gnl|cdd|81946 : 315.0) no description available & (reliability: 1436.0) & (original description: Putative TH1, Description = Thiamine biosynthetic bifunctional enzyme TH1, chloroplastic, PFAM = PF08543;PF02581)' T '18.3' 'Co-factor and vitamine metabolism.riboflavin' 'nbv0.3scaffold21892_3573-10825' '(at4g21470 : 232.0) Bifunctional enzyme that catalyzes hydrolysis of FMN to riboflavin, and phosphorylation of riboflavin to FMN.; riboflavin kinase/FMN hydrolase (FMN/FHY); FUNCTIONS IN: riboflavin kinase activity, FMN adenylyltransferase activity; INVOLVED IN: riboflavin biosynthetic process, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), Riboflavin kinase (InterPro:IPR015865), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G57440.1); Has 19964 Blast hits to 19956 proteins in 2653 species: Archae - 146; Bacteria - 15844; Metazoa - 398; Fungi - 526; Plants - 433; Viruses - 3; Other Eukaryotes - 2614 (source: NCBI BLink). & (gnl|cdd|38125 : 118.0) no description available & (gnl|cdd|30982 : 109.0) no description available & (reliability: 464.0) & (original description: Putative Sb03g035060, Description = Putative uncharacterized protein Sb03g035060, PFAM = PF13419)' T '18.3' 'Co-factor and vitamine metabolism.riboflavin' 'nbv0.3scaffold35381_1432-7293' '(at4g21470 : 559.0) Bifunctional enzyme that catalyzes hydrolysis of FMN to riboflavin, and phosphorylation of riboflavin to FMN.; riboflavin kinase/FMN hydrolase (FMN/FHY); FUNCTIONS IN: riboflavin kinase activity, FMN adenylyltransferase activity; INVOLVED IN: riboflavin biosynthetic process, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), Riboflavin kinase (InterPro:IPR015865), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G57440.1); Has 19964 Blast hits to 19956 proteins in 2653 species: Archae - 146; Bacteria - 15844; Metazoa - 398; Fungi - 526; Plants - 433; Viruses - 3; Other Eukaryotes - 2614 (source: NCBI BLink). & (gnl|cdd|38320 : 221.0) no description available & (gnl|cdd|30982 : 141.0) no description available & (reliability: 1118.0) & (original description: Putative FHY, Description = Bifunctional riboflavin kinase/FMN phosphatase, PFAM = PF01687;PF13419)' T '18.3' 'Co-factor and vitamine metabolism.riboflavin' 'niben044scf00001169ctg022_15259-26255' '(at5g08340 : 352.0) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: FMN adenylyltransferase activity; INVOLVED IN: riboflavin biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), FAD synthetase (InterPro:IPR015864); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT5G23330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|28822 : 126.0) no description available & (reliability: 704.0) & (original description: Putative RIBF2, Description = FAD synthetase 2, chloroplastic, PFAM = PF06574)' T '18.3' 'Co-factor and vitamine metabolism.riboflavin' 'niben101scf01710_165583-173719' '(at4g21470 : 284.0) Bifunctional enzyme that catalyzes hydrolysis of FMN to riboflavin, and phosphorylation of riboflavin to FMN.; riboflavin kinase/FMN hydrolase (FMN/FHY); FUNCTIONS IN: riboflavin kinase activity, FMN adenylyltransferase activity; INVOLVED IN: riboflavin biosynthetic process, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), Riboflavin kinase (InterPro:IPR015865), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G57440.1); Has 19964 Blast hits to 19956 proteins in 2653 species: Archae - 146; Bacteria - 15844; Metazoa - 398; Fungi - 526; Plants - 433; Viruses - 3; Other Eukaryotes - 2614 (source: NCBI BLink). & (gnl|cdd|38125 : 169.0) no description available & (gnl|cdd|30982 : 140.0) no description available & (reliability: 568.0) & (original description: Putative FHY, Description = Bifunctional riboflavin kinase/FMN phosphatase, PFAM = PF13419)' T '18.3' 'Co-factor and vitamine metabolism.riboflavin' 'niben101scf05177_172057-184151' '(at5g08340 : 357.0) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: FMN adenylyltransferase activity; INVOLVED IN: riboflavin biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), FAD synthetase (InterPro:IPR015864); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT5G23330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|28822 : 127.0) no description available & (reliability: 714.0) & (original description: Putative RIBF2, Description = FAD synthetase 2, chloroplastic, PFAM = PF06574)' T '18.3' 'Co-factor and vitamine metabolism.riboflavin' 'niben101scf05188_176399-196744' '(at5g08340 : 353.0) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: FMN adenylyltransferase activity; INVOLVED IN: riboflavin biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), FAD synthetase (InterPro:IPR015864); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT5G23330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|28822 : 128.0) no description available & (reliability: 706.0) & (original description: Putative RIBF2, Description = FAD synthetase 2, chloroplastic, PFAM = PF06574)' T '18.3' 'Co-factor and vitamine metabolism.riboflavin' 'niben101scf07372_14513-22448' '(at4g21470 : 542.0) Bifunctional enzyme that catalyzes hydrolysis of FMN to riboflavin, and phosphorylation of riboflavin to FMN.; riboflavin kinase/FMN hydrolase (FMN/FHY); FUNCTIONS IN: riboflavin kinase activity, FMN adenylyltransferase activity; INVOLVED IN: riboflavin biosynthetic process, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), Riboflavin kinase (InterPro:IPR015865), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G57440.1); Has 19964 Blast hits to 19956 proteins in 2653 species: Archae - 146; Bacteria - 15844; Metazoa - 398; Fungi - 526; Plants - 433; Viruses - 3; Other Eukaryotes - 2614 (source: NCBI BLink). & (gnl|cdd|38320 : 221.0) no description available & (gnl|cdd|30982 : 148.0) no description available & (reliability: 1084.0) & (original description: Putative FHY, Description = Bifunctional riboflavin kinase/FMN phosphatase, PFAM = PF13419;PF01687)' T '18.3.1' 'Co-factor and vitamine metabolism.riboflavin.GTP cyclohydrolase II' 'nbv0.5scaffold2826_315750-321069' '(at5g59750 : 711.0) DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II; FUNCTIONS IN: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, GTP cyclohydrolase II activity; INVOLVED IN: riboflavin biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP cyclohydrolase II (InterPro:IPR000926), DHBP synthase RibB (InterPro:IPR000422), DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945); BEST Arabidopsis thaliana protein match is: GTP cyclohydrolase II (TAIR:AT5G64300.1). & (gnl|cdd|82931 : 533.0) no description available & (gnl|cdd|36498 : 350.0) no description available & (reliability: 1422.0) & (original description: Putative RIBA3, Description = Monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic, PFAM = PF00926;PF00925)' T '18.3.1' 'Co-factor and vitamine metabolism.riboflavin.GTP cyclohydrolase II' 'niben101scf00189_671254-680655' '(at5g64300 : 746.0) encodes GTP cyclohydrolase II that can functionally complement E. coli mutant deficient in this gene. It also has 3,4-dihydroxy-2-butanone-4-phosphate synthase activity which makes it a bifunctional enzyme involved in the formation of the pyrimidine and of the carbohydrate from GTP and ribulose-5-phosphate, respectively; GTP cyclohydrolase II (GCH); FUNCTIONS IN: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, GTP cyclohydrolase II activity; INVOLVED IN: riboflavin biosynthetic process; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP cyclohydrolase II (InterPro:IPR000926), DHBP synthase RibB (InterPro:IPR000422), DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945); BEST Arabidopsis thaliana protein match is: riboflavin biosynthesis protein, putative (TAIR:AT2G22450.1); Has 11690 Blast hits to 11688 proteins in 2324 species: Archae - 209; Bacteria - 6956; Metazoa - 1; Fungi - 397; Plants - 132; Viruses - 0; Other Eukaryotes - 3995 (source: NCBI BLink). & (gnl|cdd|82931 : 612.0) no description available & (gnl|cdd|36498 : 398.0) no description available & (reliability: 1492.0) & (original description: Putative RIBA1, Description = Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic, PFAM = PF00925;PF00926)' T '18.3.1' 'Co-factor and vitamine metabolism.riboflavin.GTP cyclohydrolase II' 'niben101scf01005_431334-437792' '(at5g64300 : 772.0) encodes GTP cyclohydrolase II that can functionally complement E. coli mutant deficient in this gene. It also has 3,4-dihydroxy-2-butanone-4-phosphate synthase activity which makes it a bifunctional enzyme involved in the formation of the pyrimidine and of the carbohydrate from GTP and ribulose-5-phosphate, respectively; GTP cyclohydrolase II (GCH); FUNCTIONS IN: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, GTP cyclohydrolase II activity; INVOLVED IN: riboflavin biosynthetic process; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP cyclohydrolase II (InterPro:IPR000926), DHBP synthase RibB (InterPro:IPR000422), DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945); BEST Arabidopsis thaliana protein match is: riboflavin biosynthesis protein, putative (TAIR:AT2G22450.1); Has 11690 Blast hits to 11688 proteins in 2324 species: Archae - 209; Bacteria - 6956; Metazoa - 1; Fungi - 397; Plants - 132; Viruses - 0; Other Eukaryotes - 3995 (source: NCBI BLink). & (gnl|cdd|82931 : 621.0) no description available & (gnl|cdd|36498 : 412.0) no description available & (reliability: 1544.0) & (original description: Putative RIBA1, Description = Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic, PFAM = PF00926;PF00925)' T '18.3.1' 'Co-factor and vitamine metabolism.riboflavin.GTP cyclohydrolase II' 'niben101scf01866_330298-337296' '(at5g59750 : 708.0) DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II; FUNCTIONS IN: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, GTP cyclohydrolase II activity; INVOLVED IN: riboflavin biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP cyclohydrolase II (InterPro:IPR000926), DHBP synthase RibB (InterPro:IPR000422), DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945); BEST Arabidopsis thaliana protein match is: GTP cyclohydrolase II (TAIR:AT5G64300.1). & (gnl|cdd|82931 : 527.0) no description available & (gnl|cdd|36498 : 347.0) no description available & (reliability: 1416.0) & (original description: Putative RIBA3, Description = Monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic, PFAM = PF00925;PF00926)' T '18.3.1' 'Co-factor and vitamine metabolism.riboflavin.GTP cyclohydrolase II' 'niben101scf07608_149245-155811' '(at5g64300 : 775.0) encodes GTP cyclohydrolase II that can functionally complement E. coli mutant deficient in this gene. It also has 3,4-dihydroxy-2-butanone-4-phosphate synthase activity which makes it a bifunctional enzyme involved in the formation of the pyrimidine and of the carbohydrate from GTP and ribulose-5-phosphate, respectively; GTP cyclohydrolase II (GCH); FUNCTIONS IN: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, GTP cyclohydrolase II activity; INVOLVED IN: riboflavin biosynthetic process; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP cyclohydrolase II (InterPro:IPR000926), DHBP synthase RibB (InterPro:IPR000422), DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945); BEST Arabidopsis thaliana protein match is: riboflavin biosynthesis protein, putative (TAIR:AT2G22450.1); Has 11690 Blast hits to 11688 proteins in 2324 species: Archae - 209; Bacteria - 6956; Metazoa - 1; Fungi - 397; Plants - 132; Viruses - 0; Other Eukaryotes - 3995 (source: NCBI BLink). & (gnl|cdd|82931 : 624.0) no description available & (gnl|cdd|36498 : 414.0) no description available & (reliability: 1550.0) & (original description: Putative RIBA1, Description = Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic, PFAM = PF00926;PF00925)' T '18.3.2' 'Co-factor and vitamine metabolism.riboflavin.riboflavin synthase' 'nbv0.3scaffold9967_9179-12024' '(at2g20690 : 300.0) A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase.; lumazine-binding family protein; FUNCTIONS IN: binding, riboflavin synthase activity; INVOLVED IN: riboflavin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Lumazine-binding protein (InterPro:IPR001783); Has 6777 Blast hits to 6682 proteins in 2207 species: Archae - 44; Bacteria - 4232; Metazoa - 1; Fungi - 143; Plants - 41; Viruses - 0; Other Eukaryotes - 2316 (source: NCBI BLink). & (gnl|cdd|38520 : 279.0) no description available & (gnl|cdd|30655 : 235.0) no description available & (reliability: 600.0) & (original description: Putative rib5, Description = Riboflavin synthase, PFAM = PF00677;PF00677)' T '18.3.2' 'Co-factor and vitamine metabolism.riboflavin.riboflavin synthase' 'nbv0.3scaffold33716_12736-22804' '(at2g44050 : 204.0) 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase [Arabidopsis thaliana]. Acts in the jasmonic acid signaling pathway.; COI1 SUPPRESSOR1 (COS1); FUNCTIONS IN: 6,7-dimethyl-8-ribityllumazine synthase activity; INVOLVED IN: riboflavin biosynthetic process, jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6,7-dimethyl-8-ribityllumazine synthase (InterPro:IPR002180), 6,7-dimethyl-8-ribityllumazine synthase, chloroplast (InterPro:IPR017420); Has 7351 Blast hits to 7351 proteins in 2325 species: Archae - 190; Bacteria - 4938; Metazoa - 2; Fungi - 209; Plants - 81; Viruses - 0; Other Eukaryotes - 1931 (source: NCBI BLink). & (q9xh32|risb_spiol : 198.0) 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor (EC 2.5.1.9) (DMRL synthase) (Lumazine synthase) - Spinacia oleracea (Spinach) & (gnl|cdd|38453 : 173.0) no description available & (gnl|cdd|80483 : 161.0) no description available & (reliability: 408.0) & (original description: Putative HaRibC, Description = 6,7-dimethyl-8-ribityllumazine synthase, PFAM = PF00885)' T '18.3.2' 'Co-factor and vitamine metabolism.riboflavin.riboflavin synthase' 'niben044scf00010765ctg019_1-11534' '(at2g44050 : 132.0) 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase [Arabidopsis thaliana]. Acts in the jasmonic acid signaling pathway.; COI1 SUPPRESSOR1 (COS1); FUNCTIONS IN: 6,7-dimethyl-8-ribityllumazine synthase activity; INVOLVED IN: riboflavin biosynthetic process, jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6,7-dimethyl-8-ribityllumazine synthase (InterPro:IPR002180), 6,7-dimethyl-8-ribityllumazine synthase, chloroplast (InterPro:IPR017420); Has 7351 Blast hits to 7351 proteins in 2325 species: Archae - 190; Bacteria - 4938; Metazoa - 2; Fungi - 209; Plants - 81; Viruses - 0; Other Eukaryotes - 1931 (source: NCBI BLink). & (q9xh32|risb_spiol : 132.0) 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor (EC 2.5.1.9) (DMRL synthase) (Lumazine synthase) - Spinacia oleracea (Spinach) & (gnl|cdd|38453 : 104.0) no description available & (gnl|cdd|80483 : 100.0) no description available & (reliability: 264.0) & (original description: Putative ribE, Description = 6,7-dimethyl-8-ribityllumazine synthase, PFAM = PF00885)' T '18.3.2' 'Co-factor and vitamine metabolism.riboflavin.riboflavin synthase' 'niben101scf00168_153197-163809' '(at2g44050 : 200.0) 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase [Arabidopsis thaliana]. Acts in the jasmonic acid signaling pathway.; COI1 SUPPRESSOR1 (COS1); FUNCTIONS IN: 6,7-dimethyl-8-ribityllumazine synthase activity; INVOLVED IN: riboflavin biosynthetic process, jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6,7-dimethyl-8-ribityllumazine synthase (InterPro:IPR002180), 6,7-dimethyl-8-ribityllumazine synthase, chloroplast (InterPro:IPR017420); Has 7351 Blast hits to 7351 proteins in 2325 species: Archae - 190; Bacteria - 4938; Metazoa - 2; Fungi - 209; Plants - 81; Viruses - 0; Other Eukaryotes - 1931 (source: NCBI BLink). & (q9xh32|risb_spiol : 200.0) 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor (EC 2.5.1.9) (DMRL synthase) (Lumazine synthase) - Spinacia oleracea (Spinach) & (gnl|cdd|38453 : 154.0) no description available & (gnl|cdd|80483 : 145.0) no description available & (reliability: 400.0) & (original description: Putative ribE, Description = 6,7-dimethyl-8-ribityllumazine synthase, PFAM = PF00885)' T '18.3.2' 'Co-factor and vitamine metabolism.riboflavin.riboflavin synthase' 'niben101scf01023_350519-355228' '(at2g20690 : 282.0) A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase.; lumazine-binding family protein; FUNCTIONS IN: binding, riboflavin synthase activity; INVOLVED IN: riboflavin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Lumazine-binding protein (InterPro:IPR001783); Has 6777 Blast hits to 6682 proteins in 2207 species: Archae - 44; Bacteria - 4232; Metazoa - 1; Fungi - 143; Plants - 41; Viruses - 0; Other Eukaryotes - 2316 (source: NCBI BLink). & (gnl|cdd|38520 : 265.0) no description available & (gnl|cdd|30655 : 220.0) no description available & (reliability: 564.0) & (original description: Putative rib5, Description = Riboflavin synthase, alpha subunit, PFAM = PF00677;PF00677)' T '18.3.2' 'Co-factor and vitamine metabolism.riboflavin.riboflavin synthase' 'niben101scf02594_314364-317059' '(q9xh32|risb_spiol : 222.0) 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor (EC 2.5.1.9) (DMRL synthase) (Lumazine synthase) - Spinacia oleracea (Spinach) & (at2g44050 : 214.0) 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase [Arabidopsis thaliana]. Acts in the jasmonic acid signaling pathway.; COI1 SUPPRESSOR1 (COS1); FUNCTIONS IN: 6,7-dimethyl-8-ribityllumazine synthase activity; INVOLVED IN: riboflavin biosynthetic process, jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6,7-dimethyl-8-ribityllumazine synthase (InterPro:IPR002180), 6,7-dimethyl-8-ribityllumazine synthase, chloroplast (InterPro:IPR017420); Has 7351 Blast hits to 7351 proteins in 2325 species: Archae - 190; Bacteria - 4938; Metazoa - 2; Fungi - 209; Plants - 81; Viruses - 0; Other Eukaryotes - 1931 (source: NCBI BLink). & (gnl|cdd|38453 : 184.0) no description available & (gnl|cdd|80483 : 182.0) no description available & (reliability: 428.0) & (original description: Putative ribH, Description = 6,7-dimethyl-8-ribityllumazine synthase, PFAM = PF00885)' T '18.3.2' 'Co-factor and vitamine metabolism.riboflavin.riboflavin synthase' 'niben101scf02837_646659-661534' '(at2g44050 : 249.0) 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase [Arabidopsis thaliana]. Acts in the jasmonic acid signaling pathway.; COI1 SUPPRESSOR1 (COS1); FUNCTIONS IN: 6,7-dimethyl-8-ribityllumazine synthase activity; INVOLVED IN: riboflavin biosynthetic process, jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6,7-dimethyl-8-ribityllumazine synthase (InterPro:IPR002180), 6,7-dimethyl-8-ribityllumazine synthase, chloroplast (InterPro:IPR017420); Has 7351 Blast hits to 7351 proteins in 2325 species: Archae - 190; Bacteria - 4938; Metazoa - 2; Fungi - 209; Plants - 81; Viruses - 0; Other Eukaryotes - 1931 (source: NCBI BLink). & (q9xh32|risb_spiol : 249.0) 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor (EC 2.5.1.9) (DMRL synthase) (Lumazine synthase) - Spinacia oleracea (Spinach) & (gnl|cdd|38453 : 209.0) no description available & (gnl|cdd|80483 : 189.0) no description available & (reliability: 498.0) & (original description: Putative ribH, Description = 6,7-dimethyl-8-ribityllumazine synthase, PFAM = PF00885)' T '18.3.2' 'Co-factor and vitamine metabolism.riboflavin.riboflavin synthase' 'niben101scf06806_364598-387671' '(at2g44050 : 258.0) 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase [Arabidopsis thaliana]. Acts in the jasmonic acid signaling pathway.; COI1 SUPPRESSOR1 (COS1); FUNCTIONS IN: 6,7-dimethyl-8-ribityllumazine synthase activity; INVOLVED IN: riboflavin biosynthetic process, jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6,7-dimethyl-8-ribityllumazine synthase (InterPro:IPR002180), 6,7-dimethyl-8-ribityllumazine synthase, chloroplast (InterPro:IPR017420); Has 7351 Blast hits to 7351 proteins in 2325 species: Archae - 190; Bacteria - 4938; Metazoa - 2; Fungi - 209; Plants - 81; Viruses - 0; Other Eukaryotes - 1931 (source: NCBI BLink). & (q9xh32|risb_spiol : 250.0) 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor (EC 2.5.1.9) (DMRL synthase) (Lumazine synthase) - Spinacia oleracea (Spinach) & (gnl|cdd|38453 : 210.0) no description available & (gnl|cdd|80483 : 187.0) no description available & (reliability: 516.0) & (original description: Putative ribH, Description = 6,7-dimethyl-8-ribityllumazine synthase, PFAM = PF00885)' T '18.4' 'Co-factor and vitamine metabolism.pantothenate' '' '' '18.4.1' 'Co-factor and vitamine metabolism.pantothenate.branched-chain amino acid aminotransferase' 'nbv0.3scaffold183_8314-13012' '(at1g10070 : 456.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 421.0) no description available & (gnl|cdd|81992 : 319.0) no description available & (reliability: 912.0) & (original description: Putative BCAT2, Description = Branched-chain-amino-acid aminotransferase 2, chloroplastic, PFAM = PF01063)' T '18.4.1' 'Co-factor and vitamine metabolism.pantothenate.branched-chain amino acid aminotransferase' 'niben044scf00017805ctg009_4089-14515' '(at5g65780 : 525.0) encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant; ATBCAT-5; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: little nuclei4 (TAIR:AT5G65770.3). & (gnl|cdd|36193 : 446.0) no description available & (gnl|cdd|81992 : 364.0) no description available & (reliability: 1050.0) & (original description: Putative BCAT5, Description = Branched-chain-amino-acid aminotransferase 5, chloroplastic, PFAM = PF01063)' T '18.4.1' 'Co-factor and vitamine metabolism.pantothenate.branched-chain amino acid aminotransferase' 'niben101scf00904_28125-58391' '(at5g65780 : 555.0) encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant; ATBCAT-5; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: little nuclei4 (TAIR:AT5G65770.3). & (gnl|cdd|36193 : 448.0) no description available & (gnl|cdd|81992 : 355.0) no description available & (reliability: 1110.0) & (original description: Putative BCAT5, Description = Branched-chain-amino-acid aminotransferase 5, chloroplastic, PFAM = PF01063)' T '18.4.1' 'Co-factor and vitamine metabolism.pantothenate.branched-chain amino acid aminotransferase' 'niben101scf01267_7869-12654' '(at1g10070 : 520.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 410.0) no description available & (gnl|cdd|81992 : 327.0) no description available & (reliability: 1040.0) & (original description: Putative BCAT2, Description = Branched-chain-amino-acid aminotransferase 2, chloroplastic, PFAM = PF01063)' T '18.4.1' 'Co-factor and vitamine metabolism.pantothenate.branched-chain amino acid aminotransferase' 'niben101scf02348_905784-914291' '(at1g10070 : 471.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 386.0) no description available & (gnl|cdd|81992 : 313.0) no description available & (reliability: 942.0) & (original description: Putative BCAT2, Description = Branched-chain-amino-acid aminotransferase 2, chloroplastic, PFAM = PF01063)' T '18.4.1' 'Co-factor and vitamine metabolism.pantothenate.branched-chain amino acid aminotransferase' 'niben101scf04700_79196-85409' '(at1g10070 : 453.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 414.0) no description available & (gnl|cdd|81992 : 323.0) no description available & (reliability: 906.0) & (original description: Putative BCAT2, Description = Branched-chain-amino-acid aminotransferase 2, chloroplastic, PFAM = PF01063)' T '18.4.1' 'Co-factor and vitamine metabolism.pantothenate.branched-chain amino acid aminotransferase' 'niben101scf04843_12864-20690' '(at1g10070 : 464.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 389.0) no description available & (gnl|cdd|81992 : 304.0) no description available & (reliability: 928.0) & (original description: Putative BCAT6, Description = Branched-chain-amino-acid aminotransferase 6, PFAM = PF01063)' T '18.4.1' 'Co-factor and vitamine metabolism.pantothenate.branched-chain amino acid aminotransferase' 'niben101scf04884_112078-119759' '(at5g65770 : 474.0) LITTLE NUCLEI4 (LINC4); EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.2). & (gnl|cdd|35383 : 92.2) no description available & (reliability: 932.0) & (original description: Putative CRWN4, Description = Protein CROWDED NUCLEI 4, PFAM = )' T '18.4.1' 'Co-factor and vitamine metabolism.pantothenate.branched-chain amino acid aminotransferase' 'niben101scf04884_119708-130150' '(at5g65780 : 531.0) encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant; ATBCAT-5; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: little nuclei4 (TAIR:AT5G65770.3). & (gnl|cdd|36193 : 450.0) no description available & (gnl|cdd|81992 : 367.0) no description available & (reliability: 1062.0) & (original description: Putative ilvE, Description = Branched-chain-amino-acid aminotransferase, PFAM = PF01063)' T '18.4.1' 'Co-factor and vitamine metabolism.pantothenate.branched-chain amino acid aminotransferase' 'niben101scf08939_29970-43319' '(at1g10070 : 458.0) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.; branched-chain amino acid transaminase 2 (BCAT-2); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 425.0) no description available & (gnl|cdd|81992 : 321.0) no description available & (reliability: 916.0) & (original description: Putative BCAT2, Description = Branched-chain-amino-acid aminotransferase 2, chloroplastic, PFAM = PF01063)' T '18.4.2' 'Co-factor and vitamine metabolism.pantothenate.3-methyl-2-oxobutanoate hydroxymethyltransferase (KPHMT,PANB)' 'nbv0.5scaffold247_762986-769725' '(at2g46110 : 526.0) Encodes a ketopentoate hydroxymethyltransferase that appears to localize to the mitochondria. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis.; ketopantoate hydroxymethyltransferase 1 (KPHMT1); CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Ketopantoate hydroxymethyltransferase (InterPro:IPR003700); BEST Arabidopsis thaliana protein match is: Phosphoenolpyruvate carboxylase family protein (TAIR:AT3G61530.2); Has 7565 Blast hits to 7565 proteins in 2036 species: Archae - 128; Bacteria - 4147; Metazoa - 4; Fungi - 140; Plants - 59; Viruses - 0; Other Eukaryotes - 3087 (source: NCBI BLink). & (gnl|cdd|38160 : 439.0) no description available & (gnl|cdd|80618 : 325.0) no description available & (reliability: 1052.0) & (original description: Putative panB, Description = 3-methyl-2-oxobutanoate hydroxymethyltransferase, PFAM = PF02548)' T '18.4.2' 'Co-factor and vitamine metabolism.pantothenate.3-methyl-2-oxobutanoate hydroxymethyltransferase (KPHMT,PANB)' 'niben101scf08030_537919-543959' '(at3g61530 : 540.0) Encodes a ketopentoate hydroxymethyltransferase that appears to localize to the mitochondria. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis.; PANB2; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Ketopantoate hydroxymethyltransferase (InterPro:IPR003700); BEST Arabidopsis thaliana protein match is: ketopantoate hydroxymethyltransferase 1 (TAIR:AT2G46110.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38160 : 454.0) no description available & (gnl|cdd|80618 : 335.0) no description available & (reliability: 1080.0) & (original description: Putative KPHMT2, Description = 3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial, PFAM = PF02548)' T '18.4.3' 'Co-factor and vitamine metabolism.pantothenate.2-dehydropantoate 2-reductase' '' '' '18.4.4' 'Co-factor and vitamine metabolism.pantothenate.pantoate beta-alanine ligase (PANC, pantothenate synthetase)' 'nbv0.3scaffold2984_12161-14495' '(o24035|panc_lotja : 294.0) Pantoate--beta-alanine ligase precursor (EC 6.3.2.1) (Pantothenate synthetase) (Pantoate-activating enzyme) - Lotus japonicus & (at5g48840 : 292.0) Encodes a pantothenate synthetase that appears to be located in the cytosol. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis. Analysis of the catalytic properties of this enzyme indicate that it might be able to synthesize adequate amounts of pantothenate even in the presence of low levels of pantoate.; homolog of bacterial PANC (PANC); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pantoate-beta-alanine ligase (InterPro:IPR003721); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38252 : 247.0) no description available & (gnl|cdd|28807 : 234.0) no description available & (reliability: 584.0) & (original description: Putative panC, Description = Pantothenate synthetase, PFAM = PF02569)' T '18.4.4' 'Co-factor and vitamine metabolism.pantothenate.pantoate beta-alanine ligase (PANC, pantothenate synthetase)' 'niben101scf00920_79755-83920' '(o24035|panc_lotja : 452.0) Pantoate--beta-alanine ligase precursor (EC 6.3.2.1) (Pantothenate synthetase) (Pantoate-activating enzyme) - Lotus japonicus & (at5g48840 : 435.0) Encodes a pantothenate synthetase that appears to be located in the cytosol. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis. Analysis of the catalytic properties of this enzyme indicate that it might be able to synthesize adequate amounts of pantothenate even in the presence of low levels of pantoate.; homolog of bacterial PANC (PANC); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pantoate-beta-alanine ligase (InterPro:IPR003721); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38252 : 378.0) no description available & (gnl|cdd|28807 : 365.0) no description available & (reliability: 870.0) & (original description: Putative PANC, Description = Pantoate--beta-alanine ligase, PFAM = PF02569)' T '18.4.4' 'Co-factor and vitamine metabolism.pantothenate.pantoate beta-alanine ligase (PANC, pantothenate synthetase)' 'niben101scf01687_172756-177271' '(o24035|panc_lotja : 449.0) Pantoate--beta-alanine ligase precursor (EC 6.3.2.1) (Pantothenate synthetase) (Pantoate-activating enzyme) - Lotus japonicus & (at5g48840 : 432.0) Encodes a pantothenate synthetase that appears to be located in the cytosol. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis. Analysis of the catalytic properties of this enzyme indicate that it might be able to synthesize adequate amounts of pantothenate even in the presence of low levels of pantoate.; homolog of bacterial PANC (PANC); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pantoate-beta-alanine ligase (InterPro:IPR003721); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38252 : 370.0) no description available & (gnl|cdd|28807 : 358.0) no description available & (reliability: 864.0) & (original description: Putative panC1, Description = Pantothenate synthetase 1, PFAM = PF02569)' T '18.4.5' 'Co-factor and vitamine metabolism.pantothenate.pantothenate kinase (PANK)' 'niben044scf00042505ctg003_1795-4831' '(at4g32180 : 166.0) Encodes a protein with pantothenate kinase activity.; pantothenate kinase 2 (PANK2); FUNCTIONS IN: protein binding, pantothenate kinase activity; INVOLVED IN: coenzyme A biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fumble (InterPro:IPR011602), Domain of unknown function DUF89 (InterPro:IPR002791), Pantothenate kinase, acetyl-CoA regulated, two-domain type (InterPro:IPR015844), Eukaryotic pantothenate kinase (InterPro:IPR004567); BEST Arabidopsis thaliana protein match is: pantothenate kinase 1 (TAIR:AT1G60440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37412 : 88.4) no description available & (reliability: 332.0) & (original description: Putative PANK2, Description = Pantothenate kinase 2, PFAM = PF03630)' T '18.4.5' 'Co-factor and vitamine metabolism.pantothenate.pantothenate kinase (PANK)' 'niben101scf03004_419982-432758' '(at4g35360 : 595.0) Uncharacterised conserved protein (UCP030210); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF89 (InterPro:IPR002791), Uncharacterised conserved protein UCP030210 (InterPro:IPR016949); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein (UCP030210) (TAIR:AT2G17340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39784 : 466.0) no description available & (reliability: 1190.0) & (original description: Putative At2g17340, Description = Pantothenate kinase, PFAM = PF01937)' T '18.4.5' 'Co-factor and vitamine metabolism.pantothenate.pantothenate kinase (PANK)' 'niben101scf04287_437778-449680' '(at4g32180 : 496.0) Encodes a protein with pantothenate kinase activity.; pantothenate kinase 2 (PANK2); FUNCTIONS IN: protein binding, pantothenate kinase activity; INVOLVED IN: coenzyme A biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fumble (InterPro:IPR011602), Domain of unknown function DUF89 (InterPro:IPR002791), Pantothenate kinase, acetyl-CoA regulated, two-domain type (InterPro:IPR015844), Eukaryotic pantothenate kinase (InterPro:IPR004567); BEST Arabidopsis thaliana protein match is: pantothenate kinase 1 (TAIR:AT1G60440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67258 : 424.0) no description available & (gnl|cdd|37412 : 420.0) no description available & (reliability: 992.0) & (original description: Putative PANK1, Description = Pantothenate kinase 1, PFAM = PF03630)' T '18.4.5' 'Co-factor and vitamine metabolism.pantothenate.pantothenate kinase (PANK)' 'niben101scf05551_149073-157904' '(at4g32180 : 927.0) Encodes a protein with pantothenate kinase activity.; pantothenate kinase 2 (PANK2); FUNCTIONS IN: protein binding, pantothenate kinase activity; INVOLVED IN: coenzyme A biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fumble (InterPro:IPR011602), Domain of unknown function DUF89 (InterPro:IPR002791), Pantothenate kinase, acetyl-CoA regulated, two-domain type (InterPro:IPR015844), Eukaryotic pantothenate kinase (InterPro:IPR004567); BEST Arabidopsis thaliana protein match is: pantothenate kinase 1 (TAIR:AT1G60440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39784 : 419.0) no description available & (gnl|cdd|67258 : 186.0) no description available & (reliability: 1854.0) & (original description: Putative PANK4, Description = Pantothenate kinase 4, PFAM = PF03630;PF01937)' T '18.4.5' 'Co-factor and vitamine metabolism.pantothenate.pantothenate kinase (PANK)' 'niben101scf08018_16710-33066' '(at4g32180 : 1305.0) Encodes a protein with pantothenate kinase activity.; pantothenate kinase 2 (PANK2); FUNCTIONS IN: protein binding, pantothenate kinase activity; INVOLVED IN: coenzyme A biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fumble (InterPro:IPR011602), Domain of unknown function DUF89 (InterPro:IPR002791), Pantothenate kinase, acetyl-CoA regulated, two-domain type (InterPro:IPR015844), Eukaryotic pantothenate kinase (InterPro:IPR004567); BEST Arabidopsis thaliana protein match is: pantothenate kinase 1 (TAIR:AT1G60440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37412 : 483.0) no description available & (gnl|cdd|67258 : 455.0) no description available & (reliability: 2610.0) & (original description: Putative PANK2, Description = Pantothenate kinase 2, PFAM = PF01937;PF03630)' T '18.4.5' 'Co-factor and vitamine metabolism.pantothenate.pantothenate kinase (PANK)' 'niben101scf08018_16765-24299' '(at4g32180 : 430.0) Encodes a protein with pantothenate kinase activity.; pantothenate kinase 2 (PANK2); FUNCTIONS IN: protein binding, pantothenate kinase activity; INVOLVED IN: coenzyme A biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fumble (InterPro:IPR011602), Domain of unknown function DUF89 (InterPro:IPR002791), Pantothenate kinase, acetyl-CoA regulated, two-domain type (InterPro:IPR015844), Eukaryotic pantothenate kinase (InterPro:IPR004567); BEST Arabidopsis thaliana protein match is: pantothenate kinase 1 (TAIR:AT1G60440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37412 : 289.0) no description available & (gnl|cdd|67258 : 268.0) no description available & (reliability: 860.0) & (original description: Putative PANK4, Description = Pantothenate kinase 4, PFAM = PF03630)' T '18.4.5' 'Co-factor and vitamine metabolism.pantothenate.pantothenate kinase (PANK)' 'niben101scf09867_250805-261838' '(at4g35360 : 636.0) Uncharacterised conserved protein (UCP030210); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF89 (InterPro:IPR002791), Uncharacterised conserved protein UCP030210 (InterPro:IPR016949); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein (UCP030210) (TAIR:AT2G17340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39784 : 497.0) no description available & (reliability: 1272.0) & (original description: Putative At2g17340, Description = Uncharacterized protein At2g17340, PFAM = PF01937)' T '18.4.6' 'Co-factor and vitamine metabolism.pantothenate.phosphopantothenoylcysteine synthetase (PPCS)' 'nbv0.5scaffold1728_301897-307743' '(at1g12350 : 395.0) At1g12350 encodes phosphopantothenoylcysteine synthetase (phosphopantothenoylcysteine ligase). Its molecular function was shown to add cysteine forming (R)-4í-phospho-N-pantothenoylcysteine (PPC); 4-phospho-panto-thenoylcysteine synthetase (COAB); FUNCTIONS IN: phosphopantothenate--cysteine ligase activity, catalytic activity; INVOLVED IN: coenzyme A biosynthetic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: DNA/pantothenate metabolism flavoprotein, C-terminal (InterPro:IPR007085); BEST Arabidopsis thaliana protein match is: DNA / pantothenate metabolism flavoprotein (TAIR:AT5G02080.1); Has 721 Blast hits to 697 proteins in 349 species: Archae - 42; Bacteria - 251; Metazoa - 127; Fungi - 134; Plants - 66; Viruses - 4; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|37939 : 323.0) no description available & (gnl|cdd|86553 : 168.0) no description available & (reliability: 790.0) & (original description: Putative PPCS2, Description = Phosphopantothenate--cysteine ligase 2, PFAM = PF04127;PF04127)' T '18.4.6' 'Co-factor and vitamine metabolism.pantothenate.phosphopantothenoylcysteine synthetase (PPCS)' 'niben101scf00960_337158-341785' '(at1g12350 : 411.0) At1g12350 encodes phosphopantothenoylcysteine synthetase (phosphopantothenoylcysteine ligase). Its molecular function was shown to add cysteine forming (R)-4í-phospho-N-pantothenoylcysteine (PPC); 4-phospho-panto-thenoylcysteine synthetase (COAB); FUNCTIONS IN: phosphopantothenate--cysteine ligase activity, catalytic activity; INVOLVED IN: coenzyme A biosynthetic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: DNA/pantothenate metabolism flavoprotein, C-terminal (InterPro:IPR007085); BEST Arabidopsis thaliana protein match is: DNA / pantothenate metabolism flavoprotein (TAIR:AT5G02080.1); Has 721 Blast hits to 697 proteins in 349 species: Archae - 42; Bacteria - 251; Metazoa - 127; Fungi - 134; Plants - 66; Viruses - 4; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|37939 : 340.0) no description available & (gnl|cdd|86553 : 176.0) no description available & (reliability: 822.0) & (original description: Putative PPCS2, Description = Phosphopantothenate--cysteine ligase 2, PFAM = PF04127;PF04127)' T '18.4.6' 'Co-factor and vitamine metabolism.pantothenate.phosphopantothenoylcysteine synthetase (PPCS)' 'niben101scf13168_53864-61706' '(at1g12350 : 383.0) At1g12350 encodes phosphopantothenoylcysteine synthetase (phosphopantothenoylcysteine ligase). Its molecular function was shown to add cysteine forming (R)-4í-phospho-N-pantothenoylcysteine (PPC); 4-phospho-panto-thenoylcysteine synthetase (COAB); FUNCTIONS IN: phosphopantothenate--cysteine ligase activity, catalytic activity; INVOLVED IN: coenzyme A biosynthetic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: DNA/pantothenate metabolism flavoprotein, C-terminal (InterPro:IPR007085); BEST Arabidopsis thaliana protein match is: DNA / pantothenate metabolism flavoprotein (TAIR:AT5G02080.1); Has 721 Blast hits to 697 proteins in 349 species: Archae - 42; Bacteria - 251; Metazoa - 127; Fungi - 134; Plants - 66; Viruses - 4; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|37939 : 308.0) no description available & (gnl|cdd|86553 : 168.0) no description available & (reliability: 766.0) & (original description: Putative PPCS2, Description = Phosphopantothenate--cysteine ligase 2, PFAM = PF04127;PF04127)' T '18.4.7' 'Co-factor and vitamine metabolism.pantothenate.phosphopantothenoylcysteine decarboxylase (PPCDC)' 'niben101scf02105_357140-360193' '(at3g18030 : 336.0) flavin mononucleotide flavoprotein involved in salt and osmotic tolerance HAL3A encodes for phosphopantothenoylcysteine decarboxylase being involved in Coenzyme A biosynthesis. HAL3A is predominant over another gene with the presumably same function (HAL3B).; HAL3-like protein A (HAL3A); CONTAINS InterPro DOMAIN/s: Flavoprotein (InterPro:IPR003382); BEST Arabidopsis thaliana protein match is: Flavoprotein (TAIR:AT1G48605.1); Has 7047 Blast hits to 7045 proteins in 2495 species: Archae - 186; Bacteria - 4343; Metazoa - 125; Fungi - 269; Plants - 90; Viruses - 5; Other Eukaryotes - 2029 (source: NCBI BLink). & (gnl|cdd|35891 : 250.0) no description available & (gnl|cdd|81644 : 160.0) no description available & (reliability: 672.0) & (original description: Putative HAL3A, Description = Phosphopantothenoylcysteine decarboxylase, PFAM = PF02441)' T '18.4.8' 'Co-factor and vitamine metabolism.pantothenate.pantetheine-phosphate adenylyltransferase (PPAT)' 'niben101scf00592_5733-11049' '(at2g18250 : 242.0) At2g18250 encodes pantetheine-phosphate adenylyltransferase catalyzing the formation of dephospho-CoA from pantetheine 4'-phosphate. The enzyme is involved in coenzyme A biosynthesis.; 4-phosphopantetheine adenylyltransferase (COAD); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); Has 633 Blast hits to 630 proteins in 285 species: Archae - 179; Bacteria - 4; Metazoa - 125; Fungi - 130; Plants - 59; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (gnl|cdd|38561 : 199.0) no description available & (gnl|cdd|28826 : 193.0) no description available & (reliability: 484.0) & (original description: Putative COAD, Description = Phosphopantetheine adenylyltransferase, PFAM = PF01467)' T '18.4.8' 'Co-factor and vitamine metabolism.pantothenate.pantetheine-phosphate adenylyltransferase (PPAT)' 'niben101scf16937_83330-89520' '(at2g18250 : 227.0) At2g18250 encodes pantetheine-phosphate adenylyltransferase catalyzing the formation of dephospho-CoA from pantetheine 4'-phosphate. The enzyme is involved in coenzyme A biosynthesis.; 4-phosphopantetheine adenylyltransferase (COAD); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); Has 633 Blast hits to 630 proteins in 285 species: Archae - 179; Bacteria - 4; Metazoa - 125; Fungi - 130; Plants - 59; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (gnl|cdd|38561 : 193.0) no description available & (gnl|cdd|28826 : 187.0) no description available & (reliability: 454.0) & (original description: Putative COAD, Description = Phosphopantetheine adenylyltransferase, PFAM = PF01467)' T '18.4.9' 'Co-factor and vitamine metabolism.pantothenate.dephospho-CoA kinase (DPCK)' 'niben044scf00010441ctg008_22266-26827' '(at2g27490 : 318.0) AT2G27490 encodes dephospho-CoA kinase. The molecular function was shown to phosphorylate the ribosyl moiety forming CoA.; ATCOAE; FUNCTIONS IN: ATP binding, dephospho-CoA kinase activity; INVOLVED IN: coenzyme A biosynthetic process; LOCATED IN: peroxisome, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dephospho-CoA kinase (InterPro:IPR001977); Has 7074 Blast hits to 7073 proteins in 2608 species: Archae - 1; Bacteria - 4684; Metazoa - 251; Fungi - 135; Plants - 58; Viruses - 0; Other Eukaryotes - 1945 (source: NCBI BLink). & (gnl|cdd|38430 : 271.0) no description available & (gnl|cdd|30195 : 220.0) no description available & (reliability: 636.0) & (original description: Putative coaE, Description = Dephospho-CoA kinase, PFAM = PF01121)' T '18.4.9' 'Co-factor and vitamine metabolism.pantothenate.dephospho-CoA kinase (DPCK)' 'niben101scf05633_66878-72019' '(at2g27490 : 309.0) AT2G27490 encodes dephospho-CoA kinase. The molecular function was shown to phosphorylate the ribosyl moiety forming CoA.; ATCOAE; FUNCTIONS IN: ATP binding, dephospho-CoA kinase activity; INVOLVED IN: coenzyme A biosynthetic process; LOCATED IN: peroxisome, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dephospho-CoA kinase (InterPro:IPR001977); Has 7074 Blast hits to 7073 proteins in 2608 species: Archae - 1; Bacteria - 4684; Metazoa - 251; Fungi - 135; Plants - 58; Viruses - 0; Other Eukaryotes - 1945 (source: NCBI BLink). & (gnl|cdd|38430 : 269.0) no description available & (gnl|cdd|30195 : 223.0) no description available & (reliability: 618.0) & (original description: Putative coaE, Description = Dephospho-CoA kinase, PFAM = PF01121)' T '18.5' 'Co-factor and vitamine metabolism.folate & vitamine K' 'nbv0.5scaffold1762_179680-186816' '(at5g66120 : 639.0) 3-dehydroquinate synthase, putative; FUNCTIONS IN: 3-dehydroquinate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase AroB, subgroup (InterPro:IPR016037), 3-dehydroquinate synthase AroB (InterPro:IPR002658); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80438 : 486.0) no description available & (gnl|cdd|35911 : 107.0) no description available & (reliability: 1278.0) & (original description: Putative DHQS, Description = 3-dehydroquinate synthase, chloroplastic, PFAM = PF01761)' T '18.5' 'Co-factor and vitamine metabolism.folate & vitamine K' 'niben101scf07250_127947-135136' '(at5g66120 : 629.0) 3-dehydroquinate synthase, putative; FUNCTIONS IN: 3-dehydroquinate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase AroB, subgroup (InterPro:IPR016037), 3-dehydroquinate synthase AroB (InterPro:IPR002658); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80438 : 490.0) no description available & (gnl|cdd|35911 : 106.0) no description available & (reliability: 1258.0) & (original description: Putative DHQS, Description = 3-dehydroquinate synthase, chloroplastic, PFAM = PF01761)' T '18.5.1' 'Co-factor and vitamine metabolism.folate & vitamine K.folate' '' '' '18.5.1.1' 'Co-factor and vitamine metabolism.folate & vitamine K.folate.methylenetetrahydrofolate dehydrogenase (NADP+ dependent)' '' '' '18.5.2' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K' '' '' '18.5.2.1' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.isochorismate synthase' 'niben101scf05166_639516-662398' '(q9zpc0|ics_catro : 639.0) Isochorismate synthase, chloroplast precursor (EC 5.4.4.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g18870 : 592.0) Encodes a protein with isochorismate synthase activity involved in phylloquinone biosynthesis. Mutant studies of this gene's function suggest that its function is redundant with that of ICS1 (AT1G7410).; isochorismate synthase 2 (ICS2); CONTAINS InterPro DOMAIN/s: Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Isochorismate synthase (InterPro:IPR004561); BEST Arabidopsis thaliana protein match is: ADC synthase superfamily protein (TAIR:AT1G74710.1); Has 14307 Blast hits to 14303 proteins in 2517 species: Archae - 246; Bacteria - 10487; Metazoa - 5; Fungi - 253; Plants - 208; Viruses - 0; Other Eukaryotes - 3108 (source: NCBI BLink). & (gnl|cdd|36437 : 398.0) no description available & (gnl|cdd|31363 : 245.0) no description available & (reliability: 1184.0) & (original description: Putative ics, Description = Isochorismate synthase, PFAM = PF00425)' T '18.5.2.1' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.isochorismate synthase' 'niben101scf05166_639736-662377' '(q9zpc0|ics_catro : 637.0) Isochorismate synthase, chloroplast precursor (EC 5.4.4.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g18870 : 591.0) Encodes a protein with isochorismate synthase activity involved in phylloquinone biosynthesis. Mutant studies of this gene's function suggest that its function is redundant with that of ICS1 (AT1G7410).; isochorismate synthase 2 (ICS2); CONTAINS InterPro DOMAIN/s: Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Isochorismate synthase (InterPro:IPR004561); BEST Arabidopsis thaliana protein match is: ADC synthase superfamily protein (TAIR:AT1G74710.1); Has 14307 Blast hits to 14303 proteins in 2517 species: Archae - 246; Bacteria - 10487; Metazoa - 5; Fungi - 253; Plants - 208; Viruses - 0; Other Eukaryotes - 3108 (source: NCBI BLink). & (gnl|cdd|36437 : 398.0) no description available & (gnl|cdd|31363 : 245.0) no description available & (reliability: 1182.0) & (original description: Putative ics, Description = Isochorismate synthase, PFAM = PF00425)' T '18.5.2.4' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.o-Succinyl-BenzoylCoa Synthetase' 'niben101scf04323_248248-255044' '(at1g30520 : 649.0) Encodes a chloroplast O-succinylbenzoyl-CoA ligase. Involved in phylloquinone biosynthesis. Knock mutant is seedling lethal.; acyl-activating enzyme 14 (AAE14); CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G19010.1); Has 73301 Blast hits to 67448 proteins in 3614 species: Archae - 1088; Bacteria - 49563; Metazoa - 3259; Fungi - 3557; Plants - 2200; Viruses - 1; Other Eukaryotes - 13633 (source: NCBI BLink). & (gnl|cdd|36392 : 418.0) no description available & (gnl|cdd|30666 : 317.0) no description available & (o24145|4cl1_tobac : 130.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1298.0) & (original description: Putative AAE14, Description = 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal, PFAM = PF13193;PF00501)' T '18.5.2.5' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.naphthoate synthase' 'niben101scf13569_22439-27265' '(at1g60550 : 516.0) enoyl-CoA hydratase/isomerase D (ECHID); FUNCTIONS IN: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity, catalytic activity; INVOLVED IN: vitamin K biosynthetic process, metabolic process, menaquinone biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), Naphthoate synthase (InterPro:IPR010198), Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: enoyl-CoA hydratase/isomerase A (TAIR:AT4G16210.1); Has 35699 Blast hits to 35688 proteins in 2278 species: Archae - 489; Bacteria - 23573; Metazoa - 1539; Fungi - 813; Plants - 522; Viruses - 0; Other Eukaryotes - 8763 (source: NCBI BLink). & (gnl|cdd|82216 : 466.0) no description available & (gnl|cdd|36893 : 285.0) no description available & (reliability: 1032.0) & (original description: Putative MENB, Description = 1,4-dihydroxy-2-naphthoyl-CoA synthase, peroxisomal, PFAM = PF00378)' T '18.5.2.7' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.DHNA Phytyltransferase' 'niben044scf00000286ctg004_42195-49233' '(at1g60600 : 367.0) Encodes a protein similar to 1,4-dihydroxy-2-naphthoic acid phytyltransferase involved in phylloquinone and plastoquinone biosynthesis. Mutants are pale green and heterotrophic with defects in photosynthetic electron transport.; ABERRANT CHLOROPLAST DEVELOPMENT 4 (ABC4); CONTAINS InterPro DOMAIN/s: UbiA prenyltransferase (InterPro:IPR000537), 1,4-dihydroxy-2-naphthoate phytyltransferase (InterPro:IPR011937); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82225 : 243.0) no description available & (reliability: 734.0) & (original description: Putative ABC4, Description = 2-carboxy-1,4-naphthoquinone phytyltransferase, chloroplastic, PFAM = PF01040)' T '18.5.2.7' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.DHNA Phytyltransferase' 'niben101scf07608_242552-250035' '(at1g60600 : 372.0) Encodes a protein similar to 1,4-dihydroxy-2-naphthoic acid phytyltransferase involved in phylloquinone and plastoquinone biosynthesis. Mutants are pale green and heterotrophic with defects in photosynthetic electron transport.; ABERRANT CHLOROPLAST DEVELOPMENT 4 (ABC4); CONTAINS InterPro DOMAIN/s: UbiA prenyltransferase (InterPro:IPR000537), 1,4-dihydroxy-2-naphthoate phytyltransferase (InterPro:IPR011937); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82225 : 249.0) no description available & (reliability: 744.0) & (original description: Putative menA, Description = 2-carboxy-1,4-naphthoquinone phytyltransferase, PFAM = PF01040)' T '18.5.2.8' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.2-phytyl-1,4-naphthoquinone methyltransferase' 'nbv0.3scaffold37463_11676-18213' '(at1g23360 : 263.0) Encodes a 2-phytyl-1,4-naphthoquinone methyltransferase that catalyzes the final step in phylloquinone (vitamin K1) biosynthesis.; MENG; CONTAINS InterPro DOMAIN/s: UbiE/COQ5 methyltransferase (InterPro:IPR004033); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G57300.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80578 : 199.0) no description available & (gnl|cdd|36753 : 167.0) no description available & (reliability: 526.0) & (original description: Putative menG, Description = 2-phytyl-1,4-naphtoquinone methyltransferase, PFAM = PF01209)' T '18.5.2.8' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.2-phytyl-1,4-naphthoquinone methyltransferase' 'nbv0.5scaffold852_118414-124312' '(at1g23360 : 262.0) Encodes a 2-phytyl-1,4-naphthoquinone methyltransferase that catalyzes the final step in phylloquinone (vitamin K1) biosynthesis.; MENG; CONTAINS InterPro DOMAIN/s: UbiE/COQ5 methyltransferase (InterPro:IPR004033); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G57300.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80578 : 202.0) no description available & (gnl|cdd|36753 : 165.0) no description available & (reliability: 524.0) & (original description: Putative menG, Description = 2-phytyl-1,4-naphtoquinone methyltransferase, PFAM = PF01209)' T '18.5.2.8' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.2-phytyl-1,4-naphthoquinone methyltransferase' 'niben044scf00005744ctg001_1-6835' '(at1g23360 : 217.0) Encodes a 2-phytyl-1,4-naphthoquinone methyltransferase that catalyzes the final step in phylloquinone (vitamin K1) biosynthesis.; MENG; CONTAINS InterPro DOMAIN/s: UbiE/COQ5 methyltransferase (InterPro:IPR004033); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G57300.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80578 : 160.0) no description available & (gnl|cdd|36753 : 137.0) no description available & (reliability: 434.0) & (original description: Putative menG, Description = Demethylphylloquinone methyltransferase, PFAM = PF01209)' T '18.5.2.8' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.2-phytyl-1,4-naphthoquinone methyltransferase' 'niben101scf01164_41407-48470' '(at1g23360 : 344.0) Encodes a 2-phytyl-1,4-naphthoquinone methyltransferase that catalyzes the final step in phylloquinone (vitamin K1) biosynthesis.; MENG; CONTAINS InterPro DOMAIN/s: UbiE/COQ5 methyltransferase (InterPro:IPR004033); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G57300.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80578 : 260.0) no description available & (gnl|cdd|36753 : 220.0) no description available & (reliability: 688.0) & (original description: Putative MENG, Description = 2-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic, PFAM = PF01209)' T '18.5.2.8' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.2-phytyl-1,4-naphthoquinone methyltransferase' 'niben101scf02190_502818-508934' '(at1g23360 : 261.0) Encodes a 2-phytyl-1,4-naphthoquinone methyltransferase that catalyzes the final step in phylloquinone (vitamin K1) biosynthesis.; MENG; CONTAINS InterPro DOMAIN/s: UbiE/COQ5 methyltransferase (InterPro:IPR004033); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G57300.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80578 : 220.0) no description available & (gnl|cdd|36753 : 184.0) no description available & (reliability: 522.0) & (original description: Putative menG, Description = 2-phytyl-1,4-naphtoquinone methyltransferase, PFAM = PF01209)' T '18.5.2.8.1' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.2-phytyl-1,4-naphthoquinone methyltransferase.PHYLLO' 'nbv0.3scaffold12722_4586-40399' '(at1g68890 : 1627.0) Homologous to the four eubacterial men genes involved in menanoquinone biosynthesis. Studies of mutants defective in this gene demonstrated its involvement in phylloquinone biosynthesis in Arabidopsis.; magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases; FUNCTIONS IN: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity, hydro-lyase activity, magnesium ion binding, thiamin pyrophosphate binding, catalytic activity; INVOLVED IN: phylloquinone biosynthetic process, photosystem I stabilization; LOCATED IN: chloroplast; EXPRESSED IN: shoot, leaf whorl; CONTAINS InterPro DOMAIN/s: Menaquinone biosynthesis protein MenD (InterPro:IPR004433), Alpha/beta hydrolase fold-1 (InterPro:IPR000073), Mandelate racemase/muconate lactonizing enzyme, C-terminal (InterPro:IPR013342), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), O-succinylbenzoic acid (OSB) synthetase, gamma proteobacteria/archaea (InterPro:IPR010196), Mandelate racemase/muconate lactonizing enzyme, conserved site (InterPro:IPR018110); BEST Arabidopsis thaliana protein match is: isochorismate synthase 2 (TAIR:AT1G18870.2); Has 22452 Blast hits to 22188 proteins in 2448 species: Archae - 403; Bacteria - 16894; Metazoa - 237; Fungi - 200; Plants - 484; Viruses - 7; Other Eukaryotes - 4227 (source: NCBI BLink). & (gnl|cdd|82227 : 461.0) no description available & (gnl|cdd|36437 : 256.0) no description available & (reliability: 3254.0) & (original description: Putative PHYLLO, Description = Protein PHYLLO, chloroplastic, PFAM = PF00561;PF16582;PF02776;PF02775;PF13378)' T '18.5.2.8.1' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.2-phytyl-1,4-naphthoquinone methyltransferase.PHYLLO' 'nbv0.3scaffold51712_7326-12085' '(at1g68890 : 165.0) Homologous to the four eubacterial men genes involved in menanoquinone biosynthesis. Studies of mutants defective in this gene demonstrated its involvement in phylloquinone biosynthesis in Arabidopsis.; magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases; FUNCTIONS IN: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity, hydro-lyase activity, magnesium ion binding, thiamin pyrophosphate binding, catalytic activity; INVOLVED IN: phylloquinone biosynthetic process, photosystem I stabilization; LOCATED IN: chloroplast; EXPRESSED IN: shoot, leaf whorl; CONTAINS InterPro DOMAIN/s: Menaquinone biosynthesis protein MenD (InterPro:IPR004433), Alpha/beta hydrolase fold-1 (InterPro:IPR000073), Mandelate racemase/muconate lactonizing enzyme, C-terminal (InterPro:IPR013342), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), O-succinylbenzoic acid (OSB) synthetase, gamma proteobacteria/archaea (InterPro:IPR010196), Mandelate racemase/muconate lactonizing enzyme, conserved site (InterPro:IPR018110); BEST Arabidopsis thaliana protein match is: isochorismate synthase 2 (TAIR:AT1G18870.2); Has 22452 Blast hits to 22188 proteins in 2448 species: Archae - 403; Bacteria - 16894; Metazoa - 237; Fungi - 200; Plants - 484; Viruses - 7; Other Eukaryotes - 4227 (source: NCBI BLink). & (gnl|cdd|82227 : 122.0) no description available & (reliability: 330.0) & (original description: Putative menD, Description = 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase, PFAM = PF02776)' T '18.5.2.8.1' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.2-phytyl-1,4-naphthoquinone methyltransferase.PHYLLO' 'niben044scf00040985ctg003_1-14447' '(at1g68890 : 680.0) Homologous to the four eubacterial men genes involved in menanoquinone biosynthesis. Studies of mutants defective in this gene demonstrated its involvement in phylloquinone biosynthesis in Arabidopsis.; magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases; FUNCTIONS IN: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity, hydro-lyase activity, magnesium ion binding, thiamin pyrophosphate binding, catalytic activity; INVOLVED IN: phylloquinone biosynthetic process, photosystem I stabilization; LOCATED IN: chloroplast; EXPRESSED IN: shoot, leaf whorl; CONTAINS InterPro DOMAIN/s: Menaquinone biosynthesis protein MenD (InterPro:IPR004433), Alpha/beta hydrolase fold-1 (InterPro:IPR000073), Mandelate racemase/muconate lactonizing enzyme, C-terminal (InterPro:IPR013342), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), O-succinylbenzoic acid (OSB) synthetase, gamma proteobacteria/archaea (InterPro:IPR010196), Mandelate racemase/muconate lactonizing enzyme, conserved site (InterPro:IPR018110); BEST Arabidopsis thaliana protein match is: isochorismate synthase 2 (TAIR:AT1G18870.2); Has 22452 Blast hits to 22188 proteins in 2448 species: Archae - 403; Bacteria - 16894; Metazoa - 237; Fungi - 200; Plants - 484; Viruses - 7; Other Eukaryotes - 4227 (source: NCBI BLink). & (gnl|cdd|82227 : 212.0) no description available & (reliability: 1360.0) & (original description: Putative Os02g0581500, Description = Os02g0581500 protein, PFAM = PF00561;PF02775;PF13378;PF16582)' T '18.5.2.8.1' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.2-phytyl-1,4-naphthoquinone methyltransferase.PHYLLO' 'niben101scf08127_576640-616126' '(at1g68890 : 1690.0) Homologous to the four eubacterial men genes involved in menanoquinone biosynthesis. Studies of mutants defective in this gene demonstrated its involvement in phylloquinone biosynthesis in Arabidopsis.; magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases; FUNCTIONS IN: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity, hydro-lyase activity, magnesium ion binding, thiamin pyrophosphate binding, catalytic activity; INVOLVED IN: phylloquinone biosynthetic process, photosystem I stabilization; LOCATED IN: chloroplast; EXPRESSED IN: shoot, leaf whorl; CONTAINS InterPro DOMAIN/s: Menaquinone biosynthesis protein MenD (InterPro:IPR004433), Alpha/beta hydrolase fold-1 (InterPro:IPR000073), Mandelate racemase/muconate lactonizing enzyme, C-terminal (InterPro:IPR013342), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), O-succinylbenzoic acid (OSB) synthetase, gamma proteobacteria/archaea (InterPro:IPR010196), Mandelate racemase/muconate lactonizing enzyme, conserved site (InterPro:IPR018110); BEST Arabidopsis thaliana protein match is: isochorismate synthase 2 (TAIR:AT1G18870.2); Has 22452 Blast hits to 22188 proteins in 2448 species: Archae - 403; Bacteria - 16894; Metazoa - 237; Fungi - 200; Plants - 484; Viruses - 7; Other Eukaryotes - 4227 (source: NCBI BLink). & (gnl|cdd|82227 : 476.0) no description available & (gnl|cdd|36437 : 260.0) no description available & (reliability: 3380.0) & (original description: Putative PHYLLO, Description = Protein PHYLLO, chloroplastic, PFAM = PF16582;PF13378;PF02776;PF02775;PF12697)' T '18.5.2.8.1' 'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.2-phytyl-1,4-naphthoquinone methyltransferase.PHYLLO' 'niben101scf11531_116375-152469' '(at1g68890 : 1627.0) Homologous to the four eubacterial men genes involved in menanoquinone biosynthesis. Studies of mutants defective in this gene demonstrated its involvement in phylloquinone biosynthesis in Arabidopsis.; magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases; FUNCTIONS IN: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity, hydro-lyase activity, magnesium ion binding, thiamin pyrophosphate binding, catalytic activity; INVOLVED IN: phylloquinone biosynthetic process, photosystem I stabilization; LOCATED IN: chloroplast; EXPRESSED IN: shoot, leaf whorl; CONTAINS InterPro DOMAIN/s: Menaquinone biosynthesis protein MenD (InterPro:IPR004433), Alpha/beta hydrolase fold-1 (InterPro:IPR000073), Mandelate racemase/muconate lactonizing enzyme, C-terminal (InterPro:IPR013342), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), O-succinylbenzoic acid (OSB) synthetase, gamma proteobacteria/archaea (InterPro:IPR010196), Mandelate racemase/muconate lactonizing enzyme, conserved site (InterPro:IPR018110); BEST Arabidopsis thaliana protein match is: isochorismate synthase 2 (TAIR:AT1G18870.2); Has 22452 Blast hits to 22188 proteins in 2448 species: Archae - 403; Bacteria - 16894; Metazoa - 237; Fungi - 200; Plants - 484; Viruses - 7; Other Eukaryotes - 4227 (source: NCBI BLink). & (gnl|cdd|82227 : 461.0) no description available & (gnl|cdd|36437 : 257.0) no description available & (reliability: 3254.0) & (original description: Putative PHYLLO, Description = Protein PHYLLO, chloroplastic, PFAM = PF02776;PF13378;PF00561;PF16582;PF02775)' T '18.6' 'Co-factor and vitamine metabolism.biotin' 'niben101scf00557_191587-198225' '(at2g31955 : 612.0) COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 2. Encodes a protein involved in molybdenum cofactor biosynthesis. Homologous to E.coli moaA. Expression is abundant in all tissues examined, particularly in roots. Appears to have targeting signals for chloroplast or mitochondria.; cofactor of nitrate reductase and xanthine dehydrogenase 2 (CNX2); CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Molybdenum cofactor synthesis C-terminal (InterPro:IPR010505), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Molybdenum cofactor biosynthesis protein A (InterPro:IPR013483), Radical SAM (InterPro:IPR007197), MoaA/nifB/pqqE, iron-sulphur binding, conserved site (InterPro:IPR000385). & (gnl|cdd|38087 : 470.0) no description available & (gnl|cdd|80556 : 386.0) no description available & (reliability: 1224.0) & (original description: Putative CNX2, Description = Cyclic pyranopterin monophosphate synthase, mitochondrial, PFAM = PF06463;PF04055;PF13353)' T '18.6' 'Co-factor and vitamine metabolism.biotin' 'niben101scf11497_60554-68219' '(at2g31955 : 431.0) COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 2. Encodes a protein involved in molybdenum cofactor biosynthesis. Homologous to E.coli moaA. Expression is abundant in all tissues examined, particularly in roots. Appears to have targeting signals for chloroplast or mitochondria.; cofactor of nitrate reductase and xanthine dehydrogenase 2 (CNX2); CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Molybdenum cofactor synthesis C-terminal (InterPro:IPR010505), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Molybdenum cofactor biosynthesis protein A (InterPro:IPR013483), Radical SAM (InterPro:IPR007197), MoaA/nifB/pqqE, iron-sulphur binding, conserved site (InterPro:IPR000385). & (gnl|cdd|80556 : 293.0) no description available & (gnl|cdd|38087 : 224.0) no description available & (reliability: 862.0) & (original description: Putative CNX2, Description = Cyclic pyranopterin monophosphate synthase, mitochondrial, PFAM = PF13353;PF06463;PF04055)' T '18.6.1' 'Co-factor and vitamine metabolism.biotin.biotin synthase' 'nbv0.3scaffold13276_13301-21899' '(at2g43360 : 585.0) Catalyzes the conversion of dethiobiotin to biotin.; BIOTIN AUXOTROPH 2 (BIO2); CONTAINS InterPro DOMAIN/s: Biotin/thiamin synthesis-associated protein (InterPro:IPR010722), Aldolase-type TIM barrel (InterPro:IPR013785), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197), Biotin synthase (InterPro:IPR002684); Has 5366 Blast hits to 5366 proteins in 2012 species: Archae - 191; Bacteria - 4453; Metazoa - 6; Fungi - 120; Plants - 75; Viruses - 0; Other Eukaryotes - 521 (source: NCBI BLink). & (gnl|cdd|38111 : 563.0) no description available & (gnl|cdd|30848 : 386.0) no description available & (reliability: 1170.0) & (original description: Putative BIO2, Description = Biotin synthase, PFAM = PF04055;PF06968)' T '18.6.1' 'Co-factor and vitamine metabolism.biotin.biotin synthase' 'niben101scf01615_51016-71418' '(at2g43360 : 590.0) Catalyzes the conversion of dethiobiotin to biotin.; BIOTIN AUXOTROPH 2 (BIO2); CONTAINS InterPro DOMAIN/s: Biotin/thiamin synthesis-associated protein (InterPro:IPR010722), Aldolase-type TIM barrel (InterPro:IPR013785), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197), Biotin synthase (InterPro:IPR002684); Has 5366 Blast hits to 5366 proteins in 2012 species: Archae - 191; Bacteria - 4453; Metazoa - 6; Fungi - 120; Plants - 75; Viruses - 0; Other Eukaryotes - 521 (source: NCBI BLink). & (gnl|cdd|38111 : 581.0) no description available & (gnl|cdd|30848 : 401.0) no description available & (reliability: 1180.0) & (original description: Putative BIO2, Description = Biotin synthase, PFAM = PF04055;PF06968)' T '18.6.2' 'Co-factor and vitamine metabolism.biotin.Diaminopelargonic acid aminotransferase and dethiobiotin synthetase' 'nbv0.3scaffold4472_25105-32597' '(at5g57590 : 483.0) Mutant complemented by E coli Bio A gene encoding 7,8-diaminopelargonic acid aminotransferase.; biotin auxotroph 1 (BIO1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36615 : 119.0) no description available & (reliability: 966.0) & (original description: Putative biDA, Description = Onanonoxo-7-onima-8-eninoihtemlysoneda, PFAM = PF00202;PF13500)' T '18.6.2' 'Co-factor and vitamine metabolism.biotin.Diaminopelargonic acid aminotransferase and dethiobiotin synthetase' 'niben101scf03983_144737-164790' '(at5g57590 : 976.0) Mutant complemented by E coli Bio A gene encoding 7,8-diaminopelargonic acid aminotransferase.; biotin auxotroph 1 (BIO1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36615 : 326.0) no description available & (gnl|cdd|30510 : 235.0) no description available & (reliability: 1952.0) & (original description: Putative bioDA, Description = Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, PFAM = PF13500;PF00202)' T '18.6.2' 'Co-factor and vitamine metabolism.biotin.Diaminopelargonic acid aminotransferase and dethiobiotin synthetase' 'niben101scf03983_157285-164787' '(at5g57590 : 483.0) Mutant complemented by E coli Bio A gene encoding 7,8-diaminopelargonic acid aminotransferase.; biotin auxotroph 1 (BIO1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36615 : 119.0) no description available & (reliability: 966.0) & (original description: Putative biDA, Description = Onanonoxo-7-onima-8-eninoihtemlysoneda, PFAM = PF13500;PF00202)' T '18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'nbv0.3scaffold20227_14951-18310' '(at1g67810 : 201.0) Encodes a protein capable of stimulating the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. SufE2:GFP localizes to the chloroplasts where it is likely to play a role in iron-sulfur cluster assembly. Transcript levels for this gene are high in the pollen relative to other organs based on RT-PCR analysis.; sulfur E2 (SUFE2); CONTAINS InterPro DOMAIN/s: Fe-S metabolism associated SufE (InterPro:IPR003808); BEST Arabidopsis thaliana protein match is: quinolinate synthase (TAIR:AT5G50210.1); Has 2361 Blast hits to 2361 proteins in 734 species: Archae - 2; Bacteria - 1651; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 622 (source: NCBI BLink). & (gnl|cdd|32349 : 81.5) no description available & (reliability: 402.0) & (original description: Putative OLD5, Description = Quinolinate synthase, chloroplastic, PFAM = PF02657)' T '18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'nbv0.3scaffold38820_8156-15117' '(at5g50210 : 877.0) Encodes an Fe-S binding protein with quinolinate synthase (QS) activity and cysteine desulfurase activator activity. The QS activity was demonstrated by functional complementation of corresponding E. coli mutants and complementation of embryo-lethal phenotypes of the QS homozygous null allele in Arabidopsis. The SufE domain of the protein also stimulates the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. This protein binds a (4Fe-Su)2+ cluster in its NadA domain and is localized in the chloroplast.; quinolinate synthase (QS); CONTAINS InterPro DOMAIN/s: Fe-S metabolism associated SufE (InterPro:IPR003808), Quinolinate synthetase A (InterPro:IPR003473); BEST Arabidopsis thaliana protein match is: sulfur E2 (TAIR:AT1G67810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|82962 : 146.0) no description available & (reliability: 1754.0) & (original description: Putative QS, Description = Quinolinate synthase, chloroplastic, PFAM = PF02445;PF02657)' T '18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'nbv0.3scaffold65737_5995-9227' '(at4g26500 : 312.0) Sulfur acceptor that interacts with and activates the cysteine desulfurases, AtSufS in plastids and AtNifS1 in mitochondria, and both activations are vital during embryogenesis. Dual localization in mitochondria and chloroplasts. Involved in Fe-S cluster biogenesis in mitochondria and plastids. Expressed in all major tissues, with higher expression in green parts. Its expression is light-dependent and regulated at the mRNA level. Activates the cysteine desulfurase activity of CpNifS for chloroplastic iron-sulfur cluster biogenesis.; chloroplast sulfur E (CPSUFE); FUNCTIONS IN: enzyme activator activity, transcription regulator activity; INVOLVED IN: iron-sulfur cluster assembly, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fe-S metabolism associated SufE (InterPro:IPR003808), BolA-like protein (InterPro:IPR002634); BEST Arabidopsis thaliana protein match is: BolA-like family protein (TAIR:AT1G55805.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32349 : 132.0) no description available & (gnl|cdd|37524 : 109.0) no description available & (reliability: 624.0) & (original description: Putative SUFE1, Description = SufE-like protein 1, chloroplastic/mitochondrial, PFAM = PF01722;PF02657)' T '18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'nbv0.5scaffold20_1584979-1590926' '(gnl|cdd|38571 : 244.0) no description available & (at4g22220 : 235.0) Encodes a mitochondrial protein similar to E.coli IscU. In bacteria, IscU is a scaffold protein accepting sulfur and iron to build a transient Fe-S cluster,which is subsequently transferred to a target apoprotein.; ISU1; CONTAINS InterPro DOMAIN/s: NIF system FeS cluster assembly, NifU, N-terminal (InterPro:IPR002871), ISC system FeS cluster assembly, IscU scaffold (InterPro:IPR011339); BEST Arabidopsis thaliana protein match is: ISCU-like 3 (TAIR:AT4G04080.1); Has 5453 Blast hits to 5453 proteins in 1998 species: Archae - 110; Bacteria - 3654; Metazoa - 148; Fungi - 154; Plants - 89; Viruses - 0; Other Eukaryotes - 1298 (source: NCBI BLink). & (gnl|cdd|83830 : 222.0) no description available & (reliability: 438.0) & (original description: Putative ISU1, Description = Iron-sulfur cluster assembly protein 1, PFAM = PF01592)' T '18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'nbv0.5scaffold3730_73281-77352' '(at5g03905 : 184.0) Iron-sulphur cluster biosynthesis family protein; FUNCTIONS IN: iron-sulfur cluster binding, structural molecule activity; INVOLVED IN: iron-sulfur cluster assembly; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FeS cluster biogenesis (InterPro:IPR000361), FeS cluster insertion (InterPro:IPR016092); BEST Arabidopsis thaliana protein match is: chloroplast-localized ISCA-like protein (TAIR:AT1G10500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36335 : 155.0) no description available & (gnl|cdd|30664 : 116.0) no description available & (reliability: 368.0) & (original description: Putative erpA, Description = Heme biosynthesis protein HemY, PFAM = PF01521)' T '18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben044scf00006456ctg012_1091-4371' '(at4g26500 : 315.0) Sulfur acceptor that interacts with and activates the cysteine desulfurases, AtSufS in plastids and AtNifS1 in mitochondria, and both activations are vital during embryogenesis. Dual localization in mitochondria and chloroplasts. Involved in Fe-S cluster biogenesis in mitochondria and plastids. Expressed in all major tissues, with higher expression in green parts. Its expression is light-dependent and regulated at the mRNA level. Activates the cysteine desulfurase activity of CpNifS for chloroplastic iron-sulfur cluster biogenesis.; chloroplast sulfur E (CPSUFE); FUNCTIONS IN: enzyme activator activity, transcription regulator activity; INVOLVED IN: iron-sulfur cluster assembly, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fe-S metabolism associated SufE (InterPro:IPR003808), BolA-like protein (InterPro:IPR002634); BEST Arabidopsis thaliana protein match is: BolA-like family protein (TAIR:AT1G55805.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32349 : 135.0) no description available & (gnl|cdd|37524 : 110.0) no description available & (reliability: 630.0) & (original description: Putative SUFE1, Description = SufE-like protein 1, chloroplastic/mitochondrial, PFAM = PF01722;PF02657)' T '18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben044scf00007133ctg003_11278-16242' '(at5g03905 : 187.0) Iron-sulphur cluster biosynthesis family protein; FUNCTIONS IN: iron-sulfur cluster binding, structural molecule activity; INVOLVED IN: iron-sulfur cluster assembly; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FeS cluster biogenesis (InterPro:IPR000361), FeS cluster insertion (InterPro:IPR016092); BEST Arabidopsis thaliana protein match is: chloroplast-localized ISCA-like protein (TAIR:AT1G10500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36335 : 165.0) no description available & (gnl|cdd|30664 : 114.0) no description available & (reliability: 374.0) & (original description: Putative erpA, Description = Heme biosynthesis protein HemY, PFAM = PF01521)' T '18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben044scf00016686ctg000_1933-6652' '(at1g67810 : 204.0) Encodes a protein capable of stimulating the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. SufE2:GFP localizes to the chloroplasts where it is likely to play a role in iron-sulfur cluster assembly. Transcript levels for this gene are high in the pollen relative to other organs based on RT-PCR analysis.; sulfur E2 (SUFE2); CONTAINS InterPro DOMAIN/s: Fe-S metabolism associated SufE (InterPro:IPR003808); BEST Arabidopsis thaliana protein match is: quinolinate synthase (TAIR:AT5G50210.1); Has 2361 Blast hits to 2361 proteins in 734 species: Archae - 2; Bacteria - 1651; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 622 (source: NCBI BLink). & (gnl|cdd|32349 : 84.2) no description available & (reliability: 408.0) & (original description: Putative SUFE2, Description = SufE-like protein 2, chloroplastic, PFAM = PF02657)' T '18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben044scf00016686ctg000_2143-6314' '(at1g67810 : 201.0) Encodes a protein capable of stimulating the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. SufE2:GFP localizes to the chloroplasts where it is likely to play a role in iron-sulfur cluster assembly. Transcript levels for this gene are high in the pollen relative to other organs based on RT-PCR analysis.; sulfur E2 (SUFE2); CONTAINS InterPro DOMAIN/s: Fe-S metabolism associated SufE (InterPro:IPR003808); BEST Arabidopsis thaliana protein match is: quinolinate synthase (TAIR:AT5G50210.1); Has 2361 Blast hits to 2361 proteins in 734 species: Archae - 2; Bacteria - 1651; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 622 (source: NCBI BLink). & (gnl|cdd|32349 : 82.2) no description available & (reliability: 402.0) & (original description: Putative OLD5, Description = Quinolinate synthase, chloroplastic, PFAM = PF02657)' T '18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben101scf00332_661405-664261' '(at5g03905 : 94.0) Iron-sulphur cluster biosynthesis family protein; FUNCTIONS IN: iron-sulfur cluster binding, structural molecule activity; INVOLVED IN: iron-sulfur cluster assembly; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FeS cluster biogenesis (InterPro:IPR000361), FeS cluster insertion (InterPro:IPR016092); BEST Arabidopsis thaliana protein match is: chloroplast-localized ISCA-like protein (TAIR:AT1G10500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative BnaAnng00860D, Description = BnaAnng00860D protein, PFAM = )' T '18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben101scf00343_535848-546055' '(at1g72090 : 830.0) Methylthiotransferase; FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, iron-sulfur cluster binding, catalytic activity; INVOLVED IN: metabolic process, RNA modification; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methylthiotransferase (InterPro:IPR005839), Aldolase-type TIM barrel (InterPro:IPR013785), Methylthiotransferase, conserved site (InterPro:IPR020612), Methylthiotransferase, N-terminal (InterPro:IPR013848), Radical SAM (InterPro:IPR007197), Deoxyribonuclease/rho motif-related TRAM (InterPro:IPR002792), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), MiaB-like tRNA modifying enzyme, archaeal-type (InterPro:IPR006466); BEST Arabidopsis thaliana protein match is: Methylthiotransferase (TAIR:AT4G36390.1); Has 15738 Blast hits to 15705 proteins in 2423 species: Archae - 403; Bacteria - 9758; Metazoa - 296; Fungi - 1; Plants - 135; Viruses - 0; Other Eukaryotes - 5145 (source: NCBI BLink). & (gnl|cdd|39556 : 732.0) no description available & (gnl|cdd|30966 : 350.0) no description available & (q2r1u4|ck5p1_orysa : 119.0) CDK5RAP1-like protein - Oryza sativa (Rice) & (reliability: 1660.0) & (original description: Putative cdkal1, Description = Threonylcarbamoyladenosine tRNA methylthiotransferase, PFAM = PF04055;PF00919)' T '18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben101scf01225_537733-544123' '(at5g50960 : 539.0) Highly similar to Saccharomyces cerevisiae NBP35, locus YGL091C. Cytosolic protein that homodimerizes and can assemble both 4Fe-4S - type and 2Fe-2S - type clusters on its amino terminal and carboxy therminal respectively. Null mutants are embryo lethal.; nucleotide binding protein 35 (NBP35); CONTAINS InterPro DOMAIN/s: Mrp, conserved site (InterPro:IPR000808), ATPase-like, ParA/MinD (InterPro:IPR019591); BEST Arabidopsis thaliana protein match is: IND1(iron-sulfur protein required for NADH dehydrogenase)-like (TAIR:AT4G19540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38232 : 359.0) no description available & (gnl|cdd|73300 : 228.0) no description available & (reliability: 1078.0) & (original description: Putative NBP35, Description = Cytosolic Fe-S cluster assembly factor NBP35, PFAM = PF10609)' T '18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben101scf01823_74244-78896' '(at5g03905 : 187.0) Iron-sulphur cluster biosynthesis family protein; FUNCTIONS IN: iron-sulfur cluster binding, structural molecule activity; INVOLVED IN: iron-sulfur cluster assembly; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FeS cluster biogenesis (InterPro:IPR000361), FeS cluster insertion (InterPro:IPR016092); BEST Arabidopsis thaliana protein match is: chloroplast-localized ISCA-like protein (TAIR:AT1G10500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36335 : 165.0) no description available & (gnl|cdd|30664 : 116.0) no description available & (reliability: 374.0) & (original description: Putative erpA, Description = Heme biosynthesis protein HemY, PFAM = PF01521)' T '18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben101scf02634_60555-66228' '(at2g16710 : 196.0) Iron-sulphur cluster biosynthesis family protein; FUNCTIONS IN: iron-sulfur cluster binding, structural molecule activity; INVOLVED IN: iron-sulfur cluster assembly; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FeS cluster insertion, C-terminal, conserved site (InterPro:IPR017870), FeS cluster biogenesis (InterPro:IPR000361), FeS cluster insertion (InterPro:IPR016092); BEST Arabidopsis thaliana protein match is: Iron-sulphur cluster biosynthesis family protein (TAIR:AT2G36260.1). & (gnl|cdd|36336 : 168.0) no description available & (gnl|cdd|30664 : 129.0) no description available & (reliability: 392.0) & (original description: Putative iscA, Description = Iron-sulfur cluster assembly accessory protein, PFAM = PF01521)' T '18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben101scf03213_102044-104340' '(at4g26500 : 115.0) Sulfur acceptor that interacts with and activates the cysteine desulfurases, AtSufS in plastids and AtNifS1 in mitochondria, and both activations are vital during embryogenesis. Dual localization in mitochondria and chloroplasts. Involved in Fe-S cluster biogenesis in mitochondria and plastids. Expressed in all major tissues, with higher expression in green parts. Its expression is light-dependent and regulated at the mRNA level. Activates the cysteine desulfurase activity of CpNifS for chloroplastic iron-sulfur cluster biogenesis.; chloroplast sulfur E (CPSUFE); FUNCTIONS IN: enzyme activator activity, transcription regulator activity; INVOLVED IN: iron-sulfur cluster assembly, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fe-S metabolism associated SufE (InterPro:IPR003808), BolA-like protein (InterPro:IPR002634); BEST Arabidopsis thaliana protein match is: BolA-like family protein (TAIR:AT1G55805.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37524 : 95.2) no description available & (gnl|cdd|30620 : 85.4) no description available & (reliability: 230.0) & (original description: Putative SUFE, Description = AtSUFE, PFAM = PF01722)' T '18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben101scf03939_553042-575511' '(gnl|cdd|38571 : 246.0) no description available & (at4g22220 : 234.0) Encodes a mitochondrial protein similar to E.coli IscU. In bacteria, IscU is a scaffold protein accepting sulfur and iron to build a transient Fe-S cluster,which is subsequently transferred to a target apoprotein.; ISU1; CONTAINS InterPro DOMAIN/s: NIF system FeS cluster assembly, NifU, N-terminal (InterPro:IPR002871), ISC system FeS cluster assembly, IscU scaffold (InterPro:IPR011339); BEST Arabidopsis thaliana protein match is: ISCU-like 3 (TAIR:AT4G04080.1); Has 5453 Blast hits to 5453 proteins in 1998 species: Archae - 110; Bacteria - 3654; Metazoa - 148; Fungi - 154; Plants - 89; Viruses - 0; Other Eukaryotes - 1298 (source: NCBI BLink). & (gnl|cdd|83830 : 221.0) no description available & (reliability: 430.0) & (original description: Putative ISU1, Description = Iron-sulfur cluster assembly protein 1, PFAM = PF01592)' T '18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben101scf04862_53500-58032' '(at1g67810 : 203.0) Encodes a protein capable of stimulating the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. SufE2:GFP localizes to the chloroplasts where it is likely to play a role in iron-sulfur cluster assembly. Transcript levels for this gene are high in the pollen relative to other organs based on RT-PCR analysis.; sulfur E2 (SUFE2); CONTAINS InterPro DOMAIN/s: Fe-S metabolism associated SufE (InterPro:IPR003808); BEST Arabidopsis thaliana protein match is: quinolinate synthase (TAIR:AT5G50210.1); Has 2361 Blast hits to 2361 proteins in 734 species: Archae - 2; Bacteria - 1651; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 622 (source: NCBI BLink). & (gnl|cdd|32349 : 85.3) no description available & (reliability: 406.0) & (original description: Putative SUFE2, Description = SufE-like protein 2, chloroplastic, PFAM = PF02657)' T '18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben101scf04862_53710-57694' '(at1g67810 : 201.0) Encodes a protein capable of stimulating the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. SufE2:GFP localizes to the chloroplasts where it is likely to play a role in iron-sulfur cluster assembly. Transcript levels for this gene are high in the pollen relative to other organs based on RT-PCR analysis.; sulfur E2 (SUFE2); CONTAINS InterPro DOMAIN/s: Fe-S metabolism associated SufE (InterPro:IPR003808); BEST Arabidopsis thaliana protein match is: quinolinate synthase (TAIR:AT5G50210.1); Has 2361 Blast hits to 2361 proteins in 734 species: Archae - 2; Bacteria - 1651; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 622 (source: NCBI BLink). & (gnl|cdd|32349 : 83.0) no description available & (reliability: 402.0) & (original description: Putative OLD5, Description = Quinolinate synthase, chloroplastic, PFAM = PF02657)' T '18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'niben101scf07778_406497-420083' '(at2g16710 : 211.0) Iron-sulphur cluster biosynthesis family protein; FUNCTIONS IN: iron-sulfur cluster binding, structural molecule activity; INVOLVED IN: iron-sulfur cluster assembly; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FeS cluster insertion, C-terminal, conserved site (InterPro:IPR017870), FeS cluster biogenesis (InterPro:IPR000361), FeS cluster insertion (InterPro:IPR016092); BEST Arabidopsis thaliana protein match is: Iron-sulphur cluster biosynthesis family protein (TAIR:AT2G36260.1). & (gnl|cdd|36336 : 169.0) no description available & (gnl|cdd|30664 : 124.0) no description available & (reliability: 422.0) & (original description: Putative iscA, Description = Iron-sulfur cluster assembly accessory protein, PFAM = PF01521)' T '18.8' 'Co-factor and vitamine metabolism.ubiquinone' '' '' '18.8.1' 'Co-factor and vitamine metabolism.ubiquinone.hexaprenyldihydroxybenzoate methyltransferase' 'niben044scf00056938ctg000_8129-17631' '(at2g30920 : 416.0) The enzyme encoded by this gene has been shown to complement the Saccharomyces cerevisiae coq3 mutation and, therefore, to have hexaprenyldihydroxybenzoate methyltransferase activity. It is however likely that, in Arabidopsis, the enzyme catalyzes the methylation of nonaprenyldihydroxybenzoate as it is the prevalent polyprenoid in this plant species. The enzyme is a mitochondrial-localized methyltransferase involved in ubiquinone biosynthesis.; coenzyme Q 3 (COQ3); CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216), Ubiquinone biosynthesis O-methyltransferase (InterPro:IPR010233); Has 7105 Blast hits to 7105 proteins in 1734 species: Archae - 120; Bacteria - 4165; Metazoa - 130; Fungi - 181; Plants - 86; Viruses - 0; Other Eukaryotes - 2423 (source: NCBI BLink). & (gnl|cdd|81451 : 318.0) no description available & (gnl|cdd|36484 : 284.0) no description available & (reliability: 832.0) & (original description: Putative ubiG, Description = Ubiquinone biosynthesis O-methyltransferase, PFAM = PF08241)' T '18.8.1' 'Co-factor and vitamine metabolism.ubiquinone.hexaprenyldihydroxybenzoate methyltransferase' 'niben101scf02357_708054-722915' '(at2g30920 : 421.0) The enzyme encoded by this gene has been shown to complement the Saccharomyces cerevisiae coq3 mutation and, therefore, to have hexaprenyldihydroxybenzoate methyltransferase activity. It is however likely that, in Arabidopsis, the enzyme catalyzes the methylation of nonaprenyldihydroxybenzoate as it is the prevalent polyprenoid in this plant species. The enzyme is a mitochondrial-localized methyltransferase involved in ubiquinone biosynthesis.; coenzyme Q 3 (COQ3); CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216), Ubiquinone biosynthesis O-methyltransferase (InterPro:IPR010233); Has 7105 Blast hits to 7105 proteins in 1734 species: Archae - 120; Bacteria - 4165; Metazoa - 130; Fungi - 181; Plants - 86; Viruses - 0; Other Eukaryotes - 2423 (source: NCBI BLink). & (gnl|cdd|81451 : 318.0) no description available & (gnl|cdd|36484 : 286.0) no description available & (reliability: 842.0) & (original description: Putative ubiG, Description = Ubiquinone biosynthesis O-methyltransferase, PFAM = PF08241)' T '18.10' 'Co-factor and vitamine metabolism.coenzyme M' '' '' '18.10.3' 'Co-factor and vitamine metabolism.coenzyme M.2-hydroxyacid dehydrogenase' '' '' '18.11' 'Co-factor and vitamine metabolism.lipoic acid' 'nbv0.3scaffold43122_14760-17277' '(at2g20860 : 169.0) LIP1,Lipoic acid synthase,; LIPOIC ACID SYNTHASE 1 (LIP1); FUNCTIONS IN: lipoic acid synthase activity; INVOLVED IN: lipoic acid biosynthetic process, glycine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Lipoate synthase (InterPro:IPR003698), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: lipoic acid synthase family protein (TAIR:AT5G08415.1); Has 5683 Blast hits to 5683 proteins in 1186 species: Archae - 36; Bacteria - 2370; Metazoa - 113; Fungi - 91; Plants - 53; Viruses - 0; Other Eukaryotes - 3020 (source: NCBI BLink). & (gnl|cdd|37883 : 150.0) no description available & (gnl|cdd|81623 : 114.0) no description available & (reliability: 338.0) & (original description: Putative lias, Description = Lipoate synthase, PFAM = PF16881)' T '18.11' 'Co-factor and vitamine metabolism.lipoic acid' 'nbv0.5scaffold2828_180405-182922' '(at2g20860 : 168.0) LIP1,Lipoic acid synthase,; LIPOIC ACID SYNTHASE 1 (LIP1); FUNCTIONS IN: lipoic acid synthase activity; INVOLVED IN: lipoic acid biosynthetic process, glycine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Lipoate synthase (InterPro:IPR003698), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: lipoic acid synthase family protein (TAIR:AT5G08415.1); Has 5683 Blast hits to 5683 proteins in 1186 species: Archae - 36; Bacteria - 2370; Metazoa - 113; Fungi - 91; Plants - 53; Viruses - 0; Other Eukaryotes - 3020 (source: NCBI BLink). & (gnl|cdd|37883 : 149.0) no description available & (gnl|cdd|81623 : 115.0) no description available & (reliability: 336.0) & (original description: Putative lias, Description = Lipoate synthase, PFAM = PF16881)' T '18.11' 'Co-factor and vitamine metabolism.lipoic acid' 'nbv0.5scaffold4635_99559-114176' '(at2g20860 : 561.0) LIP1,Lipoic acid synthase,; LIPOIC ACID SYNTHASE 1 (LIP1); FUNCTIONS IN: lipoic acid synthase activity; INVOLVED IN: lipoic acid biosynthetic process, glycine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Lipoate synthase (InterPro:IPR003698), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: lipoic acid synthase family protein (TAIR:AT5G08415.1); Has 5683 Blast hits to 5683 proteins in 1186 species: Archae - 36; Bacteria - 2370; Metazoa - 113; Fungi - 91; Plants - 53; Viruses - 0; Other Eukaryotes - 3020 (source: NCBI BLink). & (gnl|cdd|37883 : 540.0) no description available & (gnl|cdd|81623 : 413.0) no description available & (reliability: 1122.0) & (original description: Putative LIP1, Description = Lipoyl synthase, mitochondrial, PFAM = PF04055;PF16881)' T '18.11' 'Co-factor and vitamine metabolism.lipoic acid' 'niben044scf00006610ctg021_1-3106' '(at2g20860 : 402.0) LIP1,Lipoic acid synthase,; LIPOIC ACID SYNTHASE 1 (LIP1); FUNCTIONS IN: lipoic acid synthase activity; INVOLVED IN: lipoic acid biosynthetic process, glycine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Lipoate synthase (InterPro:IPR003698), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: lipoic acid synthase family protein (TAIR:AT5G08415.1); Has 5683 Blast hits to 5683 proteins in 1186 species: Archae - 36; Bacteria - 2370; Metazoa - 113; Fungi - 91; Plants - 53; Viruses - 0; Other Eukaryotes - 3020 (source: NCBI BLink). & (gnl|cdd|37883 : 395.0) no description available & (gnl|cdd|81623 : 302.0) no description available & (reliability: 804.0) & (original description: Putative LAS, Description = Lipoic acid synthase, PFAM = PF04055)' T '18.11' 'Co-factor and vitamine metabolism.lipoic acid' 'niben101scf00290_243409-249689' '(at5g08415 : 539.0) Radical SAM superfamily protein; FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, lipoic acid synthase activity, iron-sulfur cluster binding, lipoate synthase activity, catalytic activity; INVOLVED IN: lipoic acid biosynthetic process, lipoate biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Lipoate synthase (InterPro:IPR003698), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37883 : 516.0) no description available & (gnl|cdd|81623 : 438.0) no description available & (reliability: 1078.0) & (original description: Putative LIP1P, Description = Lipoyl synthase, chloroplastic, PFAM = PF04055;PF16881)' T '18.11' 'Co-factor and vitamine metabolism.lipoic acid' 'niben101scf01192_655395-678704' '(at2g20860 : 457.0) LIP1,Lipoic acid synthase,; LIPOIC ACID SYNTHASE 1 (LIP1); FUNCTIONS IN: lipoic acid synthase activity; INVOLVED IN: lipoic acid biosynthetic process, glycine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Lipoate synthase (InterPro:IPR003698), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: lipoic acid synthase family protein (TAIR:AT5G08415.1); Has 5683 Blast hits to 5683 proteins in 1186 species: Archae - 36; Bacteria - 2370; Metazoa - 113; Fungi - 91; Plants - 53; Viruses - 0; Other Eukaryotes - 3020 (source: NCBI BLink). & (gnl|cdd|37883 : 433.0) no description available & (gnl|cdd|81623 : 323.0) no description available & (reliability: 914.0) & (original description: Putative LIP1, Description = Lipoyl synthase, mitochondrial, PFAM = PF04055;PF16881)' T '18.11' 'Co-factor and vitamine metabolism.lipoic acid' 'niben101scf06032_48306-54963' '(at2g20860 : 561.0) LIP1,Lipoic acid synthase,; LIPOIC ACID SYNTHASE 1 (LIP1); FUNCTIONS IN: lipoic acid synthase activity; INVOLVED IN: lipoic acid biosynthetic process, glycine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Lipoate synthase (InterPro:IPR003698), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: lipoic acid synthase family protein (TAIR:AT5G08415.1); Has 5683 Blast hits to 5683 proteins in 1186 species: Archae - 36; Bacteria - 2370; Metazoa - 113; Fungi - 91; Plants - 53; Viruses - 0; Other Eukaryotes - 3020 (source: NCBI BLink). & (gnl|cdd|37883 : 535.0) no description available & (gnl|cdd|81623 : 412.0) no description available & (reliability: 1122.0) & (original description: Putative LIP1, Description = Lipoyl synthase, mitochondrial, PFAM = PF16881;PF04055)' T '18.11' 'Co-factor and vitamine metabolism.lipoic acid' 'niben101scf07527_202532-209894' '(at2g20860 : 560.0) LIP1,Lipoic acid synthase,; LIPOIC ACID SYNTHASE 1 (LIP1); FUNCTIONS IN: lipoic acid synthase activity; INVOLVED IN: lipoic acid biosynthetic process, glycine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Lipoate synthase (InterPro:IPR003698), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: lipoic acid synthase family protein (TAIR:AT5G08415.1); Has 5683 Blast hits to 5683 proteins in 1186 species: Archae - 36; Bacteria - 2370; Metazoa - 113; Fungi - 91; Plants - 53; Viruses - 0; Other Eukaryotes - 3020 (source: NCBI BLink). & (gnl|cdd|37883 : 535.0) no description available & (gnl|cdd|81623 : 415.0) no description available & (reliability: 1120.0) & (original description: Putative LIP1, Description = Lipoyl synthase, mitochondrial, PFAM = PF04055;PF16881)' T '18.12' 'Co-factor and vitamine metabolism.NADH kinase' 'niben101scf20614_133197-138374' '(at1g78590 : 374.0) Encodes a NADH kinase which can synthesize NADPH from NADH; also utilizes NAD+ as substrate although NADH is the preferred substrate.; NAD(H) kinase 3 (NADK3); CONTAINS InterPro DOMAIN/s: ATP-NAD kinase, PpnK-type, alpha/beta (InterPro:IPR017438), ATP-NAD kinase, PpnK-type (InterPro:IPR016064), ATP-NAD/AcoX kinase (InterPro:IPR002504); Has 2859 Blast hits to 2859 proteins in 1070 species: Archae - 160; Bacteria - 1847; Metazoa - 99; Fungi - 31; Plants - 53; Viruses - 0; Other Eukaryotes - 669 (source: NCBI BLink). & (q6eqg2|nadhk_orysa : 360.0) Probable NADH kinase (EC 2.7.1.86) - Oryza sativa (Rice) & (gnl|cdd|39382 : 191.0) no description available & (gnl|cdd|30410 : 94.3) no description available & (reliability: 748.0) & (original description: Putative NADK3, Description = NADH kinase, PFAM = PF01513;PF01513)' T '18.13' 'Co-factor and vitamine metabolism.isochorismatase' 'nbv0.3scaffold14796_23888-40363' '(at3g16190 : 187.0) Isochorismatase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Isochorismatase-like (InterPro:IPR000868); BEST Arabidopsis thaliana protein match is: nicotinamidase 2 (TAIR:AT5G23230.1); Has 6935 Blast hits to 6933 proteins in 1622 species: Archae - 156; Bacteria - 6040; Metazoa - 0; Fungi - 183; Plants - 97; Viruses - 0; Other Eukaryotes - 459 (source: NCBI BLink). & (gnl|cdd|29548 : 105.0) no description available & (reliability: 374.0) & (original description: Putative At3g16190, Description = Probable inactive nicotinamidase At3g16190, PFAM = PF00857)' T '18.13' 'Co-factor and vitamine metabolism.isochorismatase' 'niben101scf03422_391591-396350' '(at3g16190 : 255.0) Isochorismatase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Isochorismatase-like (InterPro:IPR000868); BEST Arabidopsis thaliana protein match is: nicotinamidase 2 (TAIR:AT5G23230.1); Has 6935 Blast hits to 6933 proteins in 1622 species: Archae - 156; Bacteria - 6040; Metazoa - 0; Fungi - 183; Plants - 97; Viruses - 0; Other Eukaryotes - 459 (source: NCBI BLink). & (gnl|cdd|29548 : 142.0) no description available & (reliability: 510.0) & (original description: Putative At3g16190, Description = Probable inactive nicotinamidase At3g16190, PFAM = PF00857)' T '18.1001' 'Co-factor and vitamine metabolism' 'nicotinate' 'Co-factor metabolism; energy misc' M '18.1002' 'Co-factor and vitamine metabolism' 'nicotinamide' 'Co-factor metabolism; energy misc' M '18.1003' 'Co-factor and vitamine metabolism' 'nad' 'Co-factor metabolism; energy misc' M '18.1004' 'Co-factor and vitamine metabolism' 'nadh' 'Co-factor metabolism; energy misc' M '18.1005' 'Co-factor and vitamine metabolism' 'nadp' 'Co-factor metabolism; energy misc' M '18.1006' 'Co-factor and vitamine metabolism' 'nadph' 'Co-factor metabolism; energy misc' M '18.1007' 'Co-factor and vitamine metabolism' 'ppi' 'Co-factor metabolism; energy misc' M '18.1008' 'Co-factor and vitamine metabolism' 'pantothenate' '' M '18.1009' 'Co-factor and vitamine metabolism.lumichrome' 'lumichrome' '7,8-Dimethylalloxazine; Riboflavin metabolism' M '19' 'tetrapyrrole synthesis' 'niben044scf00002932ctg021_1-4406' '(at1g45110 : 320.0) Tetrapyrrole (Corrin/Porphyrin) Methylases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0011, conserved site (InterPro:IPR018063), Tetrapyrrole methylase (InterPro:IPR000878), Tetrapyrrole methylase, subdomain 1 (InterPro:IPR014777), Uncharacterised protein family UPF0011 (InterPro:IPR008189); Has 8880 Blast hits to 8878 proteins in 2458 species: Archae - 59; Bacteria - 5736; Metazoa - 2; Fungi - 2; Plants - 84; Viruses - 0; Other Eukaryotes - 2997 (source: NCBI BLink). & (gnl|cdd|30661 : 268.0) no description available & (reliability: 640.0) & (original description: Putative rsmI, Description = Ribosomal RNA small subunit methyltransferase I, PFAM = PF00590)' T '19' 'tetrapyrrole synthesis' 'niben101scf01701_1318845-1328044' '(at1g45110 : 424.0) Tetrapyrrole (Corrin/Porphyrin) Methylases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0011, conserved site (InterPro:IPR018063), Tetrapyrrole methylase (InterPro:IPR000878), Tetrapyrrole methylase, subdomain 1 (InterPro:IPR014777), Uncharacterised protein family UPF0011 (InterPro:IPR008189); Has 8880 Blast hits to 8878 proteins in 2458 species: Archae - 59; Bacteria - 5736; Metazoa - 2; Fungi - 2; Plants - 84; Viruses - 0; Other Eukaryotes - 2997 (source: NCBI BLink). & (gnl|cdd|30661 : 315.0) no description available & (reliability: 848.0) & (original description: Putative rsmI, Description = Ribosomal RNA small subunit methyltransferase I, PFAM = PF00590)' T '19.1' 'tetrapyrrole synthesis.glu-tRNA synthetase' 'nbv0.3scaffold44807_4615-11934' '(at3g25660 : 692.0) Amidase family protein; FUNCTIONS IN: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: translation; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120), Glutamyl-tRNA(Gln) amidotransferase A subunit (InterPro:IPR004412); BEST Arabidopsis thaliana protein match is: fatty acid amide hydrolase (TAIR:AT5G64440.1); Has 20819 Blast hits to 20789 proteins in 2485 species: Archae - 270; Bacteria - 10912; Metazoa - 560; Fungi - 1426; Plants - 399; Viruses - 0; Other Eukaryotes - 7252 (source: NCBI BLink). & (gnl|cdd|80447 : 614.0) no description available & (gnl|cdd|36425 : 429.0) no description available & (reliability: 1384.0) & (original description: Putative gatA, Description = Glu-ADT subunit A, PFAM = PF01425)' T '19.1' 'tetrapyrrole synthesis.glu-tRNA synthetase' 'nbv0.5scaffold70_1374904-1382335' '(at3g25660 : 491.0) Amidase family protein; FUNCTIONS IN: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: translation; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120), Glutamyl-tRNA(Gln) amidotransferase A subunit (InterPro:IPR004412); BEST Arabidopsis thaliana protein match is: fatty acid amide hydrolase (TAIR:AT5G64440.1); Has 20819 Blast hits to 20789 proteins in 2485 species: Archae - 270; Bacteria - 10912; Metazoa - 560; Fungi - 1426; Plants - 399; Viruses - 0; Other Eukaryotes - 7252 (source: NCBI BLink). & (gnl|cdd|80447 : 438.0) no description available & (gnl|cdd|36425 : 306.0) no description available & (reliability: 982.0) & (original description: Putative gatA, Description = Glu-ADT subunit A, PFAM = PF01425)' T '19.1' 'tetrapyrrole synthesis.glu-tRNA synthetase' 'nbv0.5scaffold5475_92132-99041' '(at1g48520 : 562.0) Encodes Glu-tRNA(Gln) amidotransferase subunit B (from Genbank record AF239836).; GLU-ADT subunit B (GATB); FUNCTIONS IN: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor, ligase activity; INVOLVED IN: glutamyl-tRNA aminoacylation, translation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site (InterPro:IPR017958), Glutamyl-tRNA(Gln) amidotransferase, B subunit (InterPro:IPR004413), Aspartyl/glutamyl-tRNA amidotransferase subunit B-related (InterPro:IPR003789), Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E (InterPro:IPR017959), Asn/Gln amidotransferase (InterPro:IPR018027), Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal (InterPro:IPR006075); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81619 : 537.0) no description available & (gnl|cdd|37649 : 448.0) no description available & (reliability: 1124.0) & (original description: Putative GATB, Description = Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial, PFAM = PF02934;PF02637)' T '19.1' 'tetrapyrrole synthesis.glu-tRNA synthetase' 'niben044scf00013496ctg003_1-5281' '(at3g25660 : 608.0) Amidase family protein; FUNCTIONS IN: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: translation; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120), Glutamyl-tRNA(Gln) amidotransferase A subunit (InterPro:IPR004412); BEST Arabidopsis thaliana protein match is: fatty acid amide hydrolase (TAIR:AT5G64440.1); Has 20819 Blast hits to 20789 proteins in 2485 species: Archae - 270; Bacteria - 10912; Metazoa - 560; Fungi - 1426; Plants - 399; Viruses - 0; Other Eukaryotes - 7252 (source: NCBI BLink). & (gnl|cdd|80447 : 562.0) no description available & (gnl|cdd|36425 : 394.0) no description available & (reliability: 1216.0) & (original description: Putative GATA, Description = Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial, PFAM = PF01425)' T '19.1' 'tetrapyrrole synthesis.glu-tRNA synthetase' 'niben044scf00018680ctg005_1-4073' '(at1g48520 : 106.0) Encodes Glu-tRNA(Gln) amidotransferase subunit B (from Genbank record AF239836).; GLU-ADT subunit B (GATB); FUNCTIONS IN: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor, ligase activity; INVOLVED IN: glutamyl-tRNA aminoacylation, translation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site (InterPro:IPR017958), Glutamyl-tRNA(Gln) amidotransferase, B subunit (InterPro:IPR004413), Aspartyl/glutamyl-tRNA amidotransferase subunit B-related (InterPro:IPR003789), Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E (InterPro:IPR017959), Asn/Gln amidotransferase (InterPro:IPR018027), Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal (InterPro:IPR006075); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81619 : 82.4) no description available & (reliability: 212.0) & (original description: Putative gatB, Description = Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial, PFAM = PF02934;PF02637)' T '19.1' 'tetrapyrrole synthesis.glu-tRNA synthetase' 'niben101scf01221_582532-589181' '(at1g48520 : 848.0) Encodes Glu-tRNA(Gln) amidotransferase subunit B (from Genbank record AF239836).; GLU-ADT subunit B (GATB); FUNCTIONS IN: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor, ligase activity; INVOLVED IN: glutamyl-tRNA aminoacylation, translation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site (InterPro:IPR017958), Glutamyl-tRNA(Gln) amidotransferase, B subunit (InterPro:IPR004413), Aspartyl/glutamyl-tRNA amidotransferase subunit B-related (InterPro:IPR003789), Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E (InterPro:IPR017959), Asn/Gln amidotransferase (InterPro:IPR018027), Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal (InterPro:IPR006075); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81619 : 726.0) no description available & (gnl|cdd|37649 : 619.0) no description available & (reliability: 1696.0) & (original description: Putative GATB, Description = Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial, PFAM = PF02934;PF02637)' T '19.1' 'tetrapyrrole synthesis.glu-tRNA synthetase' 'niben101scf01221_584353-588608' '(at1g48520 : 106.0) Encodes Glu-tRNA(Gln) amidotransferase subunit B (from Genbank record AF239836).; GLU-ADT subunit B (GATB); FUNCTIONS IN: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor, ligase activity; INVOLVED IN: glutamyl-tRNA aminoacylation, translation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site (InterPro:IPR017958), Glutamyl-tRNA(Gln) amidotransferase, B subunit (InterPro:IPR004413), Aspartyl/glutamyl-tRNA amidotransferase subunit B-related (InterPro:IPR003789), Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E (InterPro:IPR017959), Asn/Gln amidotransferase (InterPro:IPR018027), Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal (InterPro:IPR006075); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81619 : 85.1) no description available & (reliability: 212.0) & (original description: Putative gatB, Description = Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial, PFAM = PF02934;PF02637)' T '19.1' 'tetrapyrrole synthesis.glu-tRNA synthetase' 'niben101scf02390_138150-151449' '(at3g25660 : 737.0) Amidase family protein; FUNCTIONS IN: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: translation; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120), Glutamyl-tRNA(Gln) amidotransferase A subunit (InterPro:IPR004412); BEST Arabidopsis thaliana protein match is: fatty acid amide hydrolase (TAIR:AT5G64440.1); Has 20819 Blast hits to 20789 proteins in 2485 species: Archae - 270; Bacteria - 10912; Metazoa - 560; Fungi - 1426; Plants - 399; Viruses - 0; Other Eukaryotes - 7252 (source: NCBI BLink). & (gnl|cdd|80447 : 645.0) no description available & (gnl|cdd|36425 : 448.0) no description available & (reliability: 1474.0) & (original description: Putative GATA, Description = Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial, PFAM = PF01425)' T '19.1' 'tetrapyrrole synthesis.glu-tRNA synthetase' 'niben101scf04754_85898-93738' '(at3g25660 : 749.0) Amidase family protein; FUNCTIONS IN: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: translation; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120), Glutamyl-tRNA(Gln) amidotransferase A subunit (InterPro:IPR004412); BEST Arabidopsis thaliana protein match is: fatty acid amide hydrolase (TAIR:AT5G64440.1); Has 20819 Blast hits to 20789 proteins in 2485 species: Archae - 270; Bacteria - 10912; Metazoa - 560; Fungi - 1426; Plants - 399; Viruses - 0; Other Eukaryotes - 7252 (source: NCBI BLink). & (gnl|cdd|80447 : 647.0) no description available & (gnl|cdd|36425 : 447.0) no description available & (reliability: 1498.0) & (original description: Putative gatA, Description = Glutamyl-tRNA(Gln) amidotransferase subunit A, PFAM = PF01425)' T '19.1' 'tetrapyrrole synthesis.glu-tRNA synthetase' 'niben101scf04754_90674-108572' '(at3g25660 : 82.0) Amidase family protein; FUNCTIONS IN: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: translation; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120), Glutamyl-tRNA(Gln) amidotransferase A subunit (InterPro:IPR004412); BEST Arabidopsis thaliana protein match is: fatty acid amide hydrolase (TAIR:AT5G64440.1); Has 20819 Blast hits to 20789 proteins in 2485 species: Archae - 270; Bacteria - 10912; Metazoa - 560; Fungi - 1426; Plants - 399; Viruses - 0; Other Eukaryotes - 7252 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative gatA, Description = Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial, PFAM = PF01425;PF06881)' T '19.1' 'tetrapyrrole synthesis.glu-tRNA synthetase' 'niben101scf05929_645722-651655' '(at1g48520 : 508.0) Encodes Glu-tRNA(Gln) amidotransferase subunit B (from Genbank record AF239836).; GLU-ADT subunit B (GATB); FUNCTIONS IN: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor, ligase activity; INVOLVED IN: glutamyl-tRNA aminoacylation, translation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site (InterPro:IPR017958), Glutamyl-tRNA(Gln) amidotransferase, B subunit (InterPro:IPR004413), Aspartyl/glutamyl-tRNA amidotransferase subunit B-related (InterPro:IPR003789), Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E (InterPro:IPR017959), Asn/Gln amidotransferase (InterPro:IPR018027), Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal (InterPro:IPR006075); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81619 : 430.0) no description available & (gnl|cdd|37649 : 371.0) no description available & (reliability: 1016.0) & (original description: Putative gatB, Description = Asp/Glu-ADT subunit B, PFAM = PF02934;PF02637)' T '19.2' 'tetrapyrrole synthesis.glu-tRNA reductase' 'niben044scf00054987ctg007_43-4886' '(p93111|hem11_cucsa : 774.0) Glutamyl-tRNA reductase 1, chloroplast precursor (EC 1.2.1.70) (GluTR) - Cucumis sativus (Cucumber) & (at1g58290 : 717.0) Encodes a protein with glutamyl-tRNA reductase (GluTR) activity, catalyzing the NADPH-dependent reduction of Glu-tRNA(Glu) to glutamate 1-semialdehyde (GSA) with the release of free tRNA(Glu). It is involved in the early steps of chlorophyll biosynthesis.; HEMA1; FUNCTIONS IN: glutamyl-tRNA reductase activity; INVOLVED IN: chlorophyll biosynthetic process, heme biosynthetic process, response to light stimulus, porphyrin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, conserved site (InterPro:IPR018214), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal (InterPro:IPR015896), NAD(P)-binding domain (InterPro:IPR016040), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase (InterPro:IPR000343), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal (InterPro:IPR015895); BEST Arabidopsis thaliana protein match is: Glutamyl-tRNA reductase family protein (TAIR:AT1G09940.1); Has 5070 Blast hits to 5064 proteins in 1817 species: Archae - 226; Bacteria - 3676; Metazoa - 1; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 940 (source: NCBI BLink). & (gnl|cdd|80470 : 401.0) no description available & (reliability: 1434.0) & (original description: Putative HEMA1, Description = Glutamyl-tRNA reductase 1, chloroplastic, PFAM = PF00745;PF01488;PF05201)' T '19.2' 'tetrapyrrole synthesis.glu-tRNA reductase' 'niben101scf03068_52941-57802' '(p93111|hem11_cucsa : 789.0) Glutamyl-tRNA reductase 1, chloroplast precursor (EC 1.2.1.70) (GluTR) - Cucumis sativus (Cucumber) & (at1g58290 : 722.0) Encodes a protein with glutamyl-tRNA reductase (GluTR) activity, catalyzing the NADPH-dependent reduction of Glu-tRNA(Glu) to glutamate 1-semialdehyde (GSA) with the release of free tRNA(Glu). It is involved in the early steps of chlorophyll biosynthesis.; HEMA1; FUNCTIONS IN: glutamyl-tRNA reductase activity; INVOLVED IN: chlorophyll biosynthetic process, heme biosynthetic process, response to light stimulus, porphyrin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, conserved site (InterPro:IPR018214), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal (InterPro:IPR015896), NAD(P)-binding domain (InterPro:IPR016040), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase (InterPro:IPR000343), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal (InterPro:IPR015895); BEST Arabidopsis thaliana protein match is: Glutamyl-tRNA reductase family protein (TAIR:AT1G09940.1); Has 5070 Blast hits to 5064 proteins in 1817 species: Archae - 226; Bacteria - 3676; Metazoa - 1; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 940 (source: NCBI BLink). & (gnl|cdd|80470 : 400.0) no description available & (reliability: 1444.0) & (original description: Putative HEMA1, Description = Glutamyl-tRNA reductase 1, chloroplastic, PFAM = PF00745;PF05201;PF01488)' T '19.2' 'tetrapyrrole synthesis.glu-tRNA reductase' 'niben101scf10434_133542-138626' '(p93111|hem11_cucsa : 661.0) Glutamyl-tRNA reductase 1, chloroplast precursor (EC 1.2.1.70) (GluTR) - Cucumis sativus (Cucumber) & (at1g58290 : 623.0) Encodes a protein with glutamyl-tRNA reductase (GluTR) activity, catalyzing the NADPH-dependent reduction of Glu-tRNA(Glu) to glutamate 1-semialdehyde (GSA) with the release of free tRNA(Glu). It is involved in the early steps of chlorophyll biosynthesis.; HEMA1; FUNCTIONS IN: glutamyl-tRNA reductase activity; INVOLVED IN: chlorophyll biosynthetic process, heme biosynthetic process, response to light stimulus, porphyrin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, conserved site (InterPro:IPR018214), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal (InterPro:IPR015896), NAD(P)-binding domain (InterPro:IPR016040), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase (InterPro:IPR000343), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal (InterPro:IPR015895); BEST Arabidopsis thaliana protein match is: Glutamyl-tRNA reductase family protein (TAIR:AT1G09940.1); Has 5070 Blast hits to 5064 proteins in 1817 species: Archae - 226; Bacteria - 3676; Metazoa - 1; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 940 (source: NCBI BLink). & (gnl|cdd|80470 : 413.0) no description available & (reliability: 1246.0) & (original description: Putative HEMA1, Description = Glutamyl-tRNA reductase 1, chloroplastic, PFAM = PF05201;PF01488;PF00745)' T '19.3' 'tetrapyrrole synthesis.GSA' 'niben101scf01478_555368-561286' '(p31593|gsa_tobac : 748.0) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|80484 : 724.0) no description available & (at3g48730 : 712.0) glutamate-1-semialdehyde 2,1-aminomutase 2 (GSA2); FUNCTIONS IN: glutamate-1-semialdehyde 2,1-aminomutase activity, pyridoxal phosphate binding, transaminase activity, catalytic activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase (InterPro:IPR004639), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate-1-semialdehyde-2,1-aminomutase (TAIR:AT5G63570.1); Has 34778 Blast hits to 34772 proteins in 2825 species: Archae - 734; Bacteria - 23568; Metazoa - 533; Fungi - 800; Plants - 388; Viruses - 10; Other Eukaryotes - 8745 (source: NCBI BLink). & (gnl|cdd|36615 : 482.0) no description available & (reliability: 1424.0) & (original description: Putative GSA, Description = Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic, PFAM = PF00202)' T '19.3' 'tetrapyrrole synthesis.GSA' 'niben101scf02553_341224-346454' '(p31593|gsa_tobac : 851.0) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Nicotiana tabacum (Common tobacco) & (at3g48730 : 742.0) glutamate-1-semialdehyde 2,1-aminomutase 2 (GSA2); FUNCTIONS IN: glutamate-1-semialdehyde 2,1-aminomutase activity, pyridoxal phosphate binding, transaminase activity, catalytic activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase (InterPro:IPR004639), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate-1-semialdehyde-2,1-aminomutase (TAIR:AT5G63570.1); Has 34778 Blast hits to 34772 proteins in 2825 species: Archae - 734; Bacteria - 23568; Metazoa - 533; Fungi - 800; Plants - 388; Viruses - 10; Other Eukaryotes - 8745 (source: NCBI BLink). & (gnl|cdd|80484 : 713.0) no description available & (gnl|cdd|36615 : 491.0) no description available & (reliability: 1484.0) & (original description: Putative GSA, Description = Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic, PFAM = PF00202)' T '19.3' 'tetrapyrrole synthesis.GSA' 'niben101scf06382_67309-73321' '(p31593|gsa_tobac : 858.0) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Nicotiana tabacum (Common tobacco) & (at5g63570 : 742.0) Encodes a protein with homology to glutamate-1-semialdehyde 2,1-aminomutase catalyzing the conversion of glutamate-1-semialdehyde (GSA) into 5-amino levulinate. The expression of this gene was demonstrated to be light-induced.; "glutamate-1-semialdehyde-2,1-aminomutase" (GSA1); FUNCTIONS IN: glutamate-1-semialdehyde 2,1-aminomutase activity; INVOLVED IN: response to light stimulus, porphyrin biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase (InterPro:IPR004639), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate-1-semialdehyde 2,1-aminomutase 2 (TAIR:AT3G48730.1); Has 34880 Blast hits to 34874 proteins in 2819 species: Archae - 734; Bacteria - 23560; Metazoa - 547; Fungi - 812; Plants - 385; Viruses - 2; Other Eukaryotes - 8840 (source: NCBI BLink). & (gnl|cdd|80484 : 716.0) no description available & (gnl|cdd|36615 : 483.0) no description available & (reliability: 1484.0) & (original description: Putative GSA, Description = Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic, PFAM = PF00202)' T '19.4' 'tetrapyrrole synthesis.ALA dehydratase' 'niben101scf00087_597304-622835' '(at1g69740 : 635.0) Encodes a putative 5-aminolevulinate dehydratase involved in chlorophyll biosynthesis.; HEMB1; FUNCTIONS IN: porphobilinogen synthase activity, catalytic activity, metal ion binding; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Tetrapyrrole biosynthesis, porphobilinogen synthase (InterPro:IPR001731); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT1G44318.1); Has 6820 Blast hits to 6820 proteins in 2111 species: Archae - 162; Bacteria - 3714; Metazoa - 160; Fungi - 160; Plants - 86; Viruses - 0; Other Eukaryotes - 2538 (source: NCBI BLink). & (p24493|hem2_spiol : 615.0) Delta-aminolevulinic acid dehydratase, chloroplast precursor (EC 4.2.1.24) (Porphobilinogen synthase) (ALADH) (ALAD) - Spinacia oleracea (Spinach) & (gnl|cdd|38005 : 492.0) no description available & (gnl|cdd|82912 : 492.0) no description available & (reliability: 1270.0) & (original description: Putative HEMB1, Description = Delta-aminolevulinic acid dehydratase 1, chloroplastic, PFAM = PF00490)' T '19.4' 'tetrapyrrole synthesis.ALA dehydratase' 'niben101scf15549_24561-38461' '(at1g69740 : 612.0) Encodes a putative 5-aminolevulinate dehydratase involved in chlorophyll biosynthesis.; HEMB1; FUNCTIONS IN: porphobilinogen synthase activity, catalytic activity, metal ion binding; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Tetrapyrrole biosynthesis, porphobilinogen synthase (InterPro:IPR001731); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT1G44318.1); Has 6820 Blast hits to 6820 proteins in 2111 species: Archae - 162; Bacteria - 3714; Metazoa - 160; Fungi - 160; Plants - 86; Viruses - 0; Other Eukaryotes - 2538 (source: NCBI BLink). & (p30124|hem2_pea : 593.0) Delta-aminolevulinic acid dehydratase, chloroplast precursor (EC 4.2.1.24) (Porphobilinogen synthase) (ALADH) (Fragment) - Pisum sativum (Garden pea) & (gnl|cdd|82912 : 491.0) no description available & (gnl|cdd|38005 : 489.0) no description available & (reliability: 1224.0) & (original description: Putative HEMB1, Description = Delta-aminolevulinic acid dehydratase 1, chloroplastic, PFAM = PF00490)' T '19.5' 'tetrapyrrole synthesis.porphobilinogen deaminase' 'nbv0.5scaffold2213_112080-155049' '(q43082|hem3_pea : 529.0) Porphobilinogen deaminase, chloroplast precursor (EC 2.5.1.61) (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) - Pisum sativum (Garden pea) & (at5g08280 : 528.0) Encodes a protein with porphobilinogen deaminase activity. This protein is targeted to the chloroplast.; hydroxymethylbilane synthase (HEMC); FUNCTIONS IN: hydroxymethylbilane synthase activity; INVOLVED IN: chlorophyll biosynthetic process, defense response to bacterium, porphyrin biosynthetic process; LOCATED IN: apoplast, chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Porphobilinogen deaminase, dipyrromethane cofactor binding site (InterPro:IPR022419), Tetrapyrrole biosynthesis, hydroxymethylbilane synthase (InterPro:IPR000860), Porphobilinogen deaminase, N-terminal (InterPro:IPR022417), Porphobilinogen deaminase, C-terminal domain (InterPro:IPR022418); Has 7343 Blast hits to 7329 proteins in 2247 species: Archae - 198; Bacteria - 4150; Metazoa - 157; Fungi - 178; Plants - 78; Viruses - 0; Other Eukaryotes - 2582 (source: NCBI BLink). & (gnl|cdd|80490 : 381.0) no description available & (gnl|cdd|38103 : 378.0) no description available & (reliability: 1056.0) & (original description: Putative hemC, Description = Porphobilinogen deaminase, PFAM = PF01379;PF03900)' T '19.5' 'tetrapyrrole synthesis.porphobilinogen deaminase' 'niben044scf00050322ctg001_1-4523' '(q43082|hem3_pea : 535.0) Porphobilinogen deaminase, chloroplast precursor (EC 2.5.1.61) (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) - Pisum sativum (Garden pea) & (at5g08280 : 527.0) Encodes a protein with porphobilinogen deaminase activity. This protein is targeted to the chloroplast.; hydroxymethylbilane synthase (HEMC); FUNCTIONS IN: hydroxymethylbilane synthase activity; INVOLVED IN: chlorophyll biosynthetic process, defense response to bacterium, porphyrin biosynthetic process; LOCATED IN: apoplast, chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Porphobilinogen deaminase, dipyrromethane cofactor binding site (InterPro:IPR022419), Tetrapyrrole biosynthesis, hydroxymethylbilane synthase (InterPro:IPR000860), Porphobilinogen deaminase, N-terminal (InterPro:IPR022417), Porphobilinogen deaminase, C-terminal domain (InterPro:IPR022418); Has 7343 Blast hits to 7329 proteins in 2247 species: Archae - 198; Bacteria - 4150; Metazoa - 157; Fungi - 178; Plants - 78; Viruses - 0; Other Eukaryotes - 2582 (source: NCBI BLink). & (gnl|cdd|38103 : 387.0) no description available & (gnl|cdd|80490 : 381.0) no description available & (reliability: 1054.0) & (original description: Putative HEMC, Description = Porphobilinogen deaminase, chloroplastic, PFAM = PF01379;PF03900)' T '19.5' 'tetrapyrrole synthesis.porphobilinogen deaminase' 'niben101scf01728_84278-89572' '(at5g08280 : 528.0) Encodes a protein with porphobilinogen deaminase activity. This protein is targeted to the chloroplast.; hydroxymethylbilane synthase (HEMC); FUNCTIONS IN: hydroxymethylbilane synthase activity; INVOLVED IN: chlorophyll biosynthetic process, defense response to bacterium, porphyrin biosynthetic process; LOCATED IN: apoplast, chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Porphobilinogen deaminase, dipyrromethane cofactor binding site (InterPro:IPR022419), Tetrapyrrole biosynthesis, hydroxymethylbilane synthase (InterPro:IPR000860), Porphobilinogen deaminase, N-terminal (InterPro:IPR022417), Porphobilinogen deaminase, C-terminal domain (InterPro:IPR022418); Has 7343 Blast hits to 7329 proteins in 2247 species: Archae - 198; Bacteria - 4150; Metazoa - 157; Fungi - 178; Plants - 78; Viruses - 0; Other Eukaryotes - 2582 (source: NCBI BLink). & (q43082|hem3_pea : 528.0) Porphobilinogen deaminase, chloroplast precursor (EC 2.5.1.61) (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) - Pisum sativum (Garden pea) & (gnl|cdd|80490 : 381.0) no description available & (gnl|cdd|38103 : 376.0) no description available & (reliability: 1056.0) & (original description: Putative HEMC, Description = Porphobilinogen deaminase, chloroplastic, PFAM = PF03900;PF01379)' T '19.5' 'tetrapyrrole synthesis.porphobilinogen deaminase' 'niben101scf08564_472897-478023' '(q43082|hem3_pea : 533.0) Porphobilinogen deaminase, chloroplast precursor (EC 2.5.1.61) (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) - Pisum sativum (Garden pea) & (at5g08280 : 526.0) Encodes a protein with porphobilinogen deaminase activity. This protein is targeted to the chloroplast.; hydroxymethylbilane synthase (HEMC); FUNCTIONS IN: hydroxymethylbilane synthase activity; INVOLVED IN: chlorophyll biosynthetic process, defense response to bacterium, porphyrin biosynthetic process; LOCATED IN: apoplast, chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Porphobilinogen deaminase, dipyrromethane cofactor binding site (InterPro:IPR022419), Tetrapyrrole biosynthesis, hydroxymethylbilane synthase (InterPro:IPR000860), Porphobilinogen deaminase, N-terminal (InterPro:IPR022417), Porphobilinogen deaminase, C-terminal domain (InterPro:IPR022418); Has 7343 Blast hits to 7329 proteins in 2247 species: Archae - 198; Bacteria - 4150; Metazoa - 157; Fungi - 178; Plants - 78; Viruses - 0; Other Eukaryotes - 2582 (source: NCBI BLink). & (gnl|cdd|38103 : 384.0) no description available & (gnl|cdd|80490 : 380.0) no description available & (reliability: 1052.0) & (original description: Putative HEMC, Description = Porphobilinogen deaminase, chloroplastic, PFAM = PF01379;PF03900)' T '19.6' 'tetrapyrrole synthesis.uroporphyrinogen III synthase' 'nbv0.3scaffold5326_51065-60699' '(at2g26540 : 308.0) Encodes a uroporphyrinogen-III synthase involved in tetrapyrrole biosynthesis. The protein localizes to the chloroplast. Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype; HEMD; FUNCTIONS IN: uroporphyrinogen-III synthase activity; INVOLVED IN: uroporphyrinogen III biosynthetic process, porphyrin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase (InterPro:IPR003754); Has 1238 Blast hits to 1238 proteins in 600 species: Archae - 19; Bacteria - 1097; Metazoa - 0; Fungi - 1; Plants - 40; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|31775 : 124.0) no description available & (reliability: 616.0) & (original description: Putative UROS, Description = Uroporphyrinogen-III synthase, chloroplastic, PFAM = PF02602)' T '19.7' 'tetrapyrrole synthesis.uroporphyrinogen decarboxylase' 'nbv0.3scaffold12043_6705-15491' '(q42967|dcup_tobac : 609.0) Uroporphyrinogen decarboxylase, chloroplast precursor (EC 4.1.1.37) (URO-D) (UPD) - Nicotiana tabacum (Common tobacco) & (at2g40490 : 531.0) HEME2; FUNCTIONS IN: uroporphyrinogen decarboxylase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uroporphyrinogen decarboxylase HemE (InterPro:IPR006361), Uroporphyrinogen decarboxylase (URO-D) (InterPro:IPR000257); BEST Arabidopsis thaliana protein match is: Uroporphyrinogen decarboxylase (TAIR:AT3G14930.2); Has 7458 Blast hits to 7455 proteins in 2032 species: Archae - 137; Bacteria - 4041; Metazoa - 236; Fungi - 136; Plants - 121; Viruses - 0; Other Eukaryotes - 2787 (source: NCBI BLink). & (gnl|cdd|38083 : 422.0) no description available & (gnl|cdd|80524 : 378.0) no description available & (reliability: 1062.0) & (original description: Putative hemE, Description = Uroporphyrinogen decarboxylase, PFAM = PF01208)' T '19.7' 'tetrapyrrole synthesis.uroporphyrinogen decarboxylase' 'nbv0.5scaffold1876_356602-366974' '(at3g14930 : 615.0) HEME1; FUNCTIONS IN: uroporphyrinogen decarboxylase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uroporphyrinogen decarboxylase HemE (InterPro:IPR006361), Uroporphyrinogen decarboxylase (URO-D) (InterPro:IPR000257); BEST Arabidopsis thaliana protein match is: Uroporphyrinogen decarboxylase (TAIR:AT2G40490.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38083 : 465.0) no description available & (gnl|cdd|80524 : 433.0) no description available & (q42967|dcup_tobac : 400.0) Uroporphyrinogen decarboxylase, chloroplast precursor (EC 4.1.1.37) (URO-D) (UPD) - Nicotiana tabacum (Common tobacco) & (reliability: 1230.0) & (original description: Putative hemE, Description = Uroporphyrinogen decarboxylase, PFAM = PF01208)' T '19.7' 'tetrapyrrole synthesis.uroporphyrinogen decarboxylase' 'niben101scf00773_744891-753677' '(q42967|dcup_tobac : 710.0) Uroporphyrinogen decarboxylase, chloroplast precursor (EC 4.1.1.37) (URO-D) (UPD) - Nicotiana tabacum (Common tobacco) & (at2g40490 : 627.0) HEME2; FUNCTIONS IN: uroporphyrinogen decarboxylase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uroporphyrinogen decarboxylase HemE (InterPro:IPR006361), Uroporphyrinogen decarboxylase (URO-D) (InterPro:IPR000257); BEST Arabidopsis thaliana protein match is: Uroporphyrinogen decarboxylase (TAIR:AT3G14930.2); Has 7458 Blast hits to 7455 proteins in 2032 species: Archae - 137; Bacteria - 4041; Metazoa - 236; Fungi - 136; Plants - 121; Viruses - 0; Other Eukaryotes - 2787 (source: NCBI BLink). & (gnl|cdd|38083 : 506.0) no description available & (gnl|cdd|80524 : 465.0) no description available & (reliability: 1254.0) & (original description: Putative DCUP, Description = Uroporphyrinogen decarboxylase, chloroplastic, PFAM = PF01208)' T '19.7' 'tetrapyrrole synthesis.uroporphyrinogen decarboxylase' 'niben101scf04036_614466-632002' '(at3g14930 : 620.0) HEME1; FUNCTIONS IN: uroporphyrinogen decarboxylase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uroporphyrinogen decarboxylase HemE (InterPro:IPR006361), Uroporphyrinogen decarboxylase (URO-D) (InterPro:IPR000257); BEST Arabidopsis thaliana protein match is: Uroporphyrinogen decarboxylase (TAIR:AT2G40490.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38083 : 468.0) no description available & (gnl|cdd|80524 : 433.0) no description available & (q42967|dcup_tobac : 396.0) Uroporphyrinogen decarboxylase, chloroplast precursor (EC 4.1.1.37) (URO-D) (UPD) - Nicotiana tabacum (Common tobacco) & (reliability: 1240.0) & (original description: Putative HEME1, Description = Uroporphyrinogen decarboxylase 1, chloroplastic, PFAM = PF01208)' T '19.7' 'tetrapyrrole synthesis.uroporphyrinogen decarboxylase' 'niben101scf07267_211914-224768' '(q42967|dcup_tobac : 744.0) Uroporphyrinogen decarboxylase, chloroplast precursor (EC 4.1.1.37) (URO-D) (UPD) - Nicotiana tabacum (Common tobacco) & (at2g40490 : 624.0) HEME2; FUNCTIONS IN: uroporphyrinogen decarboxylase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uroporphyrinogen decarboxylase HemE (InterPro:IPR006361), Uroporphyrinogen decarboxylase (URO-D) (InterPro:IPR000257); BEST Arabidopsis thaliana protein match is: Uroporphyrinogen decarboxylase (TAIR:AT3G14930.2); Has 7458 Blast hits to 7455 proteins in 2032 species: Archae - 137; Bacteria - 4041; Metazoa - 236; Fungi - 136; Plants - 121; Viruses - 0; Other Eukaryotes - 2787 (source: NCBI BLink). & (gnl|cdd|38083 : 502.0) no description available & (gnl|cdd|80524 : 462.0) no description available & (reliability: 1248.0) & (original description: Putative DCUP, Description = Uroporphyrinogen decarboxylase, chloroplastic, PFAM = PF01208)' T '19.8' 'tetrapyrrole synthesis.coproporphyrinogen III oxidase' 'niben101scf03281_244214-251716' '(q42946|hem6_tobac : 692.0) Coproporphyrinogen III oxidase, chloroplast precursor (EC 1.3.3.3) (Coproporphyrinogenase) (Coprogen oxidase) - Nicotiana tabacum (Common tobacco) & (at1g03475 : 604.0) Encodes coproporphyrinogen III oxidase, a key enzyme in the biosynthetic pathway of chlorophyll and heme, a tetrapyrrole pathway. Mutants express cytological and molecular markers associated with the defense responses, usually activated by pathogen infection.; LESION INITIATION 2 (LIN2); FUNCTIONS IN: coproporphyrinogen oxidase activity; INVOLVED IN: tetrapyrrole biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Coproporphyrinogen III oxidase (InterPro:IPR001260), Coproporphyrinogen III oxidase, conserved site (InterPro:IPR018375); BEST Arabidopsis thaliana protein match is: Coproporphyrinogen III oxidase (TAIR:AT4G03205.1); Has 4884 Blast hits to 4875 proteins in 1228 species: Archae - 0; Bacteria - 2144; Metazoa - 115; Fungi - 160; Plants - 86; Viruses - 0; Other Eukaryotes - 2379 (source: NCBI BLink). & (gnl|cdd|36731 : 512.0) no description available & (gnl|cdd|65046 : 501.0) no description available & (reliability: 1208.0) & (original description: Putative CPX, Description = Oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic, PFAM = PF01218)' T '19.8' 'tetrapyrrole synthesis.coproporphyrinogen III oxidase' 'niben101scf09025_233794-239270' '(at5g63290 : 599.0) Radical SAM superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron-sulfur cluster binding, coproporphyrinogen oxidase activity, catalytic activity; INVOLVED IN: oxidation reduction, porphyrin biosynthetic process; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Putative oxygen-independent coproporphyrinogen III oxidase (InterPro:IPR004559), HemN, C-terminal (InterPro:IPR010723), Radical SAM (InterPro:IPR007197); Has 10146 Blast hits to 10146 proteins in 2456 species: Archae - 113; Bacteria - 8401; Metazoa - 78; Fungi - 4; Plants - 37; Viruses - 0; Other Eukaryotes - 1513 (source: NCBI BLink). & (gnl|cdd|76069 : 449.0) no description available & (reliability: 1198.0) & (original description: Putative hemN, Description = HemN, PFAM = PF04055)' T '19.8' 'tetrapyrrole synthesis.coproporphyrinogen III oxidase' 'niben101scf09708_1076782-1084850' '(q42946|hem6_tobac : 719.0) Coproporphyrinogen III oxidase, chloroplast precursor (EC 1.3.3.3) (Coproporphyrinogenase) (Coprogen oxidase) - Nicotiana tabacum (Common tobacco) & (at1g03475 : 611.0) Encodes coproporphyrinogen III oxidase, a key enzyme in the biosynthetic pathway of chlorophyll and heme, a tetrapyrrole pathway. Mutants express cytological and molecular markers associated with the defense responses, usually activated by pathogen infection.; LESION INITIATION 2 (LIN2); FUNCTIONS IN: coproporphyrinogen oxidase activity; INVOLVED IN: tetrapyrrole biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Coproporphyrinogen III oxidase (InterPro:IPR001260), Coproporphyrinogen III oxidase, conserved site (InterPro:IPR018375); BEST Arabidopsis thaliana protein match is: Coproporphyrinogen III oxidase (TAIR:AT4G03205.1); Has 4884 Blast hits to 4875 proteins in 1228 species: Archae - 0; Bacteria - 2144; Metazoa - 115; Fungi - 160; Plants - 86; Viruses - 0; Other Eukaryotes - 2379 (source: NCBI BLink). & (gnl|cdd|36731 : 517.0) no description available & (gnl|cdd|65046 : 504.0) no description available & (reliability: 1222.0) & (original description: Putative CPX, Description = Oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic, PFAM = PF01218)' T '19.9' 'tetrapyrrole synthesis.protoporphyrin IX oxidase' 'nbv0.3scaffold29274_1401-7746' '(o24163|ppoc_tobac : 940.0) Protoporphyrinogen oxidase, chloroplast precursor (EC 1.3.3.4) (PPO I) (Protoporphyrinogen IX oxidase isozyme I) (PPX I) - Nicotiana tabacum (Common tobacco) & (at4g01690 : 716.0) Encodes protoporphyrinogen oxidase (PPOX).; PPOX; FUNCTIONS IN: oxygen-dependent protoporphyrinogen oxidase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Protoporphyrinogen oxidase (InterPro:IPR004572); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2189 Blast hits to 2187 proteins in 783 species: Archae - 6; Bacteria - 1392; Metazoa - 195; Fungi - 135; Plants - 152; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (gnl|cdd|36490 : 441.0) no description available & (gnl|cdd|84018 : 235.0) no description available & (reliability: 1432.0) & (original description: Putative PPXI, Description = Protoporphyrinogen oxidase, chloroplastic, PFAM = PF01593)' T '19.9' 'tetrapyrrole synthesis.protoporphyrin IX oxidase' 'nbv0.5scaffold3507_335161-340493' '(o24163|ppoc_tobac : 699.0) Protoporphyrinogen oxidase, chloroplast precursor (EC 1.3.3.4) (PPO I) (Protoporphyrinogen IX oxidase isozyme I) (PPX I) - Nicotiana tabacum (Common tobacco) & (at4g01690 : 528.0) Encodes protoporphyrinogen oxidase (PPOX).; PPOX; FUNCTIONS IN: oxygen-dependent protoporphyrinogen oxidase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Protoporphyrinogen oxidase (InterPro:IPR004572); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2189 Blast hits to 2187 proteins in 783 species: Archae - 6; Bacteria - 1392; Metazoa - 195; Fungi - 135; Plants - 152; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (gnl|cdd|36490 : 335.0) no description available & (gnl|cdd|84018 : 168.0) no description available & (reliability: 1056.0) & (original description: Putative hemG, Description = Protoporphyrinogen oxidase, PFAM = PF01593)' T '19.9' 'tetrapyrrole synthesis.protoporphyrin IX oxidase' 'niben044scf00025312ctg002_5050-16076' '(o24163|ppoc_tobac : 740.0) Protoporphyrinogen oxidase, chloroplast precursor (EC 1.3.3.4) (PPO I) (Protoporphyrinogen IX oxidase isozyme I) (PPX I) - Nicotiana tabacum (Common tobacco) & (at4g01690 : 565.0) Encodes protoporphyrinogen oxidase (PPOX).; PPOX; FUNCTIONS IN: oxygen-dependent protoporphyrinogen oxidase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Protoporphyrinogen oxidase (InterPro:IPR004572); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2189 Blast hits to 2187 proteins in 783 species: Archae - 6; Bacteria - 1392; Metazoa - 195; Fungi - 135; Plants - 152; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (gnl|cdd|36490 : 347.0) no description available & (gnl|cdd|84018 : 173.0) no description available & (reliability: 1130.0) & (original description: Putative hemG, Description = Protoporphyrinogen oxidase, PFAM = PF01593)' T '19.9' 'tetrapyrrole synthesis.protoporphyrin IX oxidase' 'niben044scf00055219ctg000_1-2791' '(o24164|ppom_tobac : 198.0) Protoporphyrinogen oxidase, mitochondrial (EC 1.3.3.4) (PPO II) (Protoporphyrinogen IX oxidase isozyme II) (PPX II) (PX-2) - Nicotiana tabacum (Common tobacco) & (at5g14220 : 149.0) Encodes PPO2, a putative protoporphyrinogen oxidase based on sequence homology. Also known as MEE61 (maternal effect embryo arrest 61). mee61 mutant shows arrested endosperm development.; HEMG2; FUNCTIONS IN: oxygen-dependent protoporphyrinogen oxidase activity; INVOLVED IN: porphyrin biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Adrenodoxin reductase (InterPro:IPR000759), Protoporphyrinogen oxidase (InterPro:IPR004572); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT4G01690.1). & (reliability: 298.0) & (original description: Putative hemG, Description = Protoporphyrinogen oxidase, chloroplastic/mitochondrial, PFAM = PF01593)' T '19.9' 'tetrapyrrole synthesis.protoporphyrin IX oxidase' 'niben101scf00110_586966-598691' '(o24163|ppoc_tobac : 983.0) Protoporphyrinogen oxidase, chloroplast precursor (EC 1.3.3.4) (PPO I) (Protoporphyrinogen IX oxidase isozyme I) (PPX I) - Nicotiana tabacum (Common tobacco) & (at4g01690 : 754.0) Encodes protoporphyrinogen oxidase (PPOX).; PPOX; FUNCTIONS IN: oxygen-dependent protoporphyrinogen oxidase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Protoporphyrinogen oxidase (InterPro:IPR004572); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2189 Blast hits to 2187 proteins in 783 species: Archae - 6; Bacteria - 1392; Metazoa - 195; Fungi - 135; Plants - 152; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (gnl|cdd|36490 : 454.0) no description available & (gnl|cdd|84018 : 240.0) no description available & (reliability: 1508.0) & (original description: Putative PPXI, Description = Protoporphyrinogen oxidase, chloroplastic, PFAM = PF01593)' T '19.9' 'tetrapyrrole synthesis.protoporphyrin IX oxidase' 'niben101scf05955_421144-426521' '(o24163|ppoc_tobac : 774.0) Protoporphyrinogen oxidase, chloroplast precursor (EC 1.3.3.4) (PPO I) (Protoporphyrinogen IX oxidase isozyme I) (PPX I) - Nicotiana tabacum (Common tobacco) & (at4g01690 : 561.0) Encodes protoporphyrinogen oxidase (PPOX).; PPOX; FUNCTIONS IN: oxygen-dependent protoporphyrinogen oxidase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Protoporphyrinogen oxidase (InterPro:IPR004572); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2189 Blast hits to 2187 proteins in 783 species: Archae - 6; Bacteria - 1392; Metazoa - 195; Fungi - 135; Plants - 152; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (gnl|cdd|36490 : 345.0) no description available & (gnl|cdd|84018 : 174.0) no description available & (reliability: 1122.0) & (original description: Putative hemG, Description = Protoporphyrinogen oxidase, PFAM = PF01593)' T '19.9' 'tetrapyrrole synthesis.protoporphyrin IX oxidase' 'niben101scf12725_34760-45514' '(o24164|ppom_tobac : 978.0) Protoporphyrinogen oxidase, mitochondrial (EC 1.3.3.4) (PPO II) (Protoporphyrinogen IX oxidase isozyme II) (PPX II) (PX-2) - Nicotiana tabacum (Common tobacco) & (at5g14220 : 664.0) Encodes PPO2, a putative protoporphyrinogen oxidase based on sequence homology. Also known as MEE61 (maternal effect embryo arrest 61). mee61 mutant shows arrested endosperm development.; HEMG2; FUNCTIONS IN: oxygen-dependent protoporphyrinogen oxidase activity; INVOLVED IN: porphyrin biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Adrenodoxin reductase (InterPro:IPR000759), Protoporphyrinogen oxidase (InterPro:IPR004572); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT4G01690.1). & (gnl|cdd|36490 : 404.0) no description available & (gnl|cdd|31425 : 250.0) no description available & (reliability: 1328.0) & (original description: Putative PPXII, Description = Protoporphyrinogen oxidase, mitochondrial, PFAM = PF01593)' T '19.10' 'tetrapyrrole synthesis.magnesium chelatase' 'nbv0.5scaffold1207_14216-22070' '(at5g13630 : 2414.0) Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.; GENOMES UNCOUPLED 5 (GUN5); FUNCTIONS IN: magnesium chelatase activity; INVOLVED IN: chlorophyll biosynthetic process, biosynthetic process; LOCATED IN: mitochondrion, magnesium chelatase complex, chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CobN/magnesium chelatase (InterPro:IPR003672), Magnesium-chelatase, subunit H (InterPro:IPR011771); Has 3665 Blast hits to 3123 proteins in 644 species: Archae - 281; Bacteria - 1903; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (gnl|cdd|84160 : 2072.0) no description available & (reliability: 4828.0) & (original description: Putative chlH, Description = Protoporphyrin IX Mg-chelatase subunit H, PFAM = PF11965;PF02514)' T '19.10' 'tetrapyrrole synthesis.magnesium chelatase' 'niben044scf00047285ctg000_7392-11916' '(o22436|chli_tobac : 669.0) Magnesium-chelatase subunit chlI, chloroplast precursor (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79298 : 616.0) no description available & (at4g18480 : 558.0) Encodes the CHLI subunit of magnesium chelatase which is required for chlorophyll biosynthesis. All four cysteine residues of the protein form two disulfide bonds (Cys102-Cys193 and Cys354-Cys396) under oxidized conditions but are fully reduced by reduction. It was suggested that the redox state of CHLI is regulated in vivo by the change of the redox environment in the chloroplasts probably via the Trx system.; CHLI1; FUNCTIONS IN: magnesium chelatase activity, ATPase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: magnesium chelatase complex, cell wall, chloroplast, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Magnesium chelatase, ChlI subunit (InterPro:IPR000523), Magnesium chelatase, ATPase subunit I (InterPro:IPR011775); BEST Arabidopsis thaliana protein match is: magnesium chelatase i2 (TAIR:AT5G45930.1); Has 6584 Blast hits to 6581 proteins in 1594 species: Archae - 309; Bacteria - 5009; Metazoa - 2; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 1058 (source: NCBI BLink). & (reliability: 1116.0) & (original description: Putative CHLI, Description = Magnesium-chelatase subunit ChlI, chloroplastic, PFAM = PF01078)' T '19.10' 'tetrapyrrole synthesis.magnesium chelatase' 'niben044scf00047538ctg001_15611-20540' '(o22436|chli_tobac : 654.0) Magnesium-chelatase subunit chlI, chloroplast precursor (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79298 : 599.0) no description available & (at4g18480 : 541.0) Encodes the CHLI subunit of magnesium chelatase which is required for chlorophyll biosynthesis. All four cysteine residues of the protein form two disulfide bonds (Cys102-Cys193 and Cys354-Cys396) under oxidized conditions but are fully reduced by reduction. It was suggested that the redox state of CHLI is regulated in vivo by the change of the redox environment in the chloroplasts probably via the Trx system.; CHLI1; FUNCTIONS IN: magnesium chelatase activity, ATPase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: magnesium chelatase complex, cell wall, chloroplast, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Magnesium chelatase, ChlI subunit (InterPro:IPR000523), Magnesium chelatase, ATPase subunit I (InterPro:IPR011775); BEST Arabidopsis thaliana protein match is: magnesium chelatase i2 (TAIR:AT5G45930.1); Has 6584 Blast hits to 6581 proteins in 1594 species: Archae - 309; Bacteria - 5009; Metazoa - 2; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 1058 (source: NCBI BLink). & (reliability: 1082.0) & (original description: Putative bchI, Description = Mg-protoporphyrin IX chelatase, PFAM = PF01078)' T '19.10' 'tetrapyrrole synthesis.magnesium chelatase' 'niben101scf01209_424434-445746' '(o24133|chld_tobac : 1298.0) Magnesium-chelatase subunit chlD, chloroplast precursor (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase) (Mg-chelatase subunit D) - Nicotiana tabacum (Common tobacco) & (at1g08520 : 1064.0) Encodes the CHLD subunit of the Mg-chelatase enzyme involved in chlorophyll biosynthesis. Lines carrying recessive mutations of this locus are white and seedling lethal.; ALBINA 1 (ALB1); FUNCTIONS IN: magnesium chelatase activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: magnesium chelatase complex, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Magnesium chelatase, ChlI subunit (InterPro:IPR000523), Magnesium chelatase, ATPase subunit D (InterPro:IPR011776), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G18480.1); Has 11508 Blast hits to 8193 proteins in 1580 species: Archae - 212; Bacteria - 4110; Metazoa - 3314; Fungi - 479; Plants - 476; Viruses - 191; Other Eukaryotes - 2726 (source: NCBI BLink). & (gnl|cdd|31432 : 319.0) no description available & (reliability: 2128.0) & (original description: Putative CHLD, Description = Magnesium-chelatase subunit ChlD, chloroplastic, PFAM = PF01078;PF13519)' T '19.10' 'tetrapyrrole synthesis.magnesium chelatase' 'niben101scf01308_319104-323925' '(o22436|chli_tobac : 667.0) Magnesium-chelatase subunit chlI, chloroplast precursor (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79298 : 614.0) no description available & (at4g18480 : 556.0) Encodes the CHLI subunit of magnesium chelatase which is required for chlorophyll biosynthesis. All four cysteine residues of the protein form two disulfide bonds (Cys102-Cys193 and Cys354-Cys396) under oxidized conditions but are fully reduced by reduction. It was suggested that the redox state of CHLI is regulated in vivo by the change of the redox environment in the chloroplasts probably via the Trx system.; CHLI1; FUNCTIONS IN: magnesium chelatase activity, ATPase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: magnesium chelatase complex, cell wall, chloroplast, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Magnesium chelatase, ChlI subunit (InterPro:IPR000523), Magnesium chelatase, ATPase subunit I (InterPro:IPR011775); BEST Arabidopsis thaliana protein match is: magnesium chelatase i2 (TAIR:AT5G45930.1); Has 6584 Blast hits to 6581 proteins in 1594 species: Archae - 309; Bacteria - 5009; Metazoa - 2; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 1058 (source: NCBI BLink). & (reliability: 1112.0) & (original description: Putative CHLI, Description = Magnesium-chelatase subunit ChlI, chloroplastic, PFAM = PF01078)' T '19.10' 'tetrapyrrole synthesis.magnesium chelatase' 'niben101scf04388_30743-38393' '(at5g13630 : 2417.0) Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.; GENOMES UNCOUPLED 5 (GUN5); FUNCTIONS IN: magnesium chelatase activity; INVOLVED IN: chlorophyll biosynthetic process, biosynthetic process; LOCATED IN: mitochondrion, magnesium chelatase complex, chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CobN/magnesium chelatase (InterPro:IPR003672), Magnesium-chelatase, subunit H (InterPro:IPR011771); Has 3665 Blast hits to 3123 proteins in 644 species: Archae - 281; Bacteria - 1903; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (gnl|cdd|84160 : 2072.0) no description available & (reliability: 4834.0) & (original description: Putative CHLH, Description = Magnesium-chelatase subunit ChlH, chloroplastic, PFAM = PF11965;PF02514)' T '19.10' 'tetrapyrrole synthesis.magnesium chelatase' 'niben101scf16898_168148-172759' '(o22436|chli_tobac : 652.0) Magnesium-chelatase subunit chlI, chloroplast precursor (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79298 : 598.0) no description available & (at4g18480 : 541.0) Encodes the CHLI subunit of magnesium chelatase which is required for chlorophyll biosynthesis. All four cysteine residues of the protein form two disulfide bonds (Cys102-Cys193 and Cys354-Cys396) under oxidized conditions but are fully reduced by reduction. It was suggested that the redox state of CHLI is regulated in vivo by the change of the redox environment in the chloroplasts probably via the Trx system.; CHLI1; FUNCTIONS IN: magnesium chelatase activity, ATPase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: magnesium chelatase complex, cell wall, chloroplast, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Magnesium chelatase, ChlI subunit (InterPro:IPR000523), Magnesium chelatase, ATPase subunit I (InterPro:IPR011775); BEST Arabidopsis thaliana protein match is: magnesium chelatase i2 (TAIR:AT5G45930.1); Has 6584 Blast hits to 6581 proteins in 1594 species: Archae - 309; Bacteria - 5009; Metazoa - 2; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 1058 (source: NCBI BLink). & (reliability: 1082.0) & (original description: Putative CHLI, Description = Magnesium-chelatase subunit ChlI, chloroplastic, PFAM = PF01078)' T '19.11' 'tetrapyrrole synthesis.magnesium protoporphyrin IX methyltransferase' 'niben101scf03548_298598-305148' '(at4g25080 : 404.0) Encodes a protein with methyltransferase activity responsible for the methylation of magnesium protoporphyrin IX. Mutants defective in this gene are affected in chlorophyll biosynthesis and show a reduction in the accumulation of a number of major thylakoid-associated proteins including components of PSI (LHCI), PSII (LHCII, D1, CP43) and the cytochrome b6f complex (Cytf). By contrast, no significant changes were detected for the proteins of the stroma and the chloroplast envelope.; magnesium-protoporphyrin IX methyltransferase (CHLM); CONTAINS InterPro DOMAIN/s: Magnesium-protoporphyrin IX methyltransferase, C-terminal (InterPro:IPR010940), Magnesium protoporphyrin O-methyltransferase (InterPro:IPR010251). & (gnl|cdd|82288 : 292.0) no description available & (gnl|cdd|36484 : 181.0) no description available & (reliability: 808.0) & (original description: Putative CHLM, Description = Magnesium protoporphyrin IX methyltransferase, chloroplastic, PFAM = PF07109)' T '19.12' 'tetrapyrrole synthesis.magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase' 'nbv0.3scaffold31613_9581-13677' '(q6sjv8|crd1_goshi : 634.0) Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) - Gossypium hirsutum (Upland cotton) & (at3g56940 : 625.0) Encodes a putative ZIP protein with varying mRNA accumulation in leaves, stems and roots. Has a consensus carboxylate-bridged di-iron binding site.; COPPER RESPONSE DEFECT 1 (CRD1); FUNCTIONS IN: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity, DNA binding; INVOLVED IN: chlorophyll biosynthetic process, oxidation reduction, photosynthesis; LOCATED IN: chloroplast thylakoid membrane, chloroplast inner membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase (InterPro:IPR008434), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Rubrerythrin (InterPro:IPR003251). & (gnl|cdd|29774 : 532.0) no description available & (reliability: 1250.0) & (original description: Putative zip, Description = Putative desaturase-like protein, PFAM = PF02915)' T '19.12' 'tetrapyrrole synthesis.magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase' 'niben101scf10305_145510-150006' '(q6sjv8|crd1_goshi : 631.0) Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) - Gossypium hirsutum (Upland cotton) & (at3g56940 : 627.0) Encodes a putative ZIP protein with varying mRNA accumulation in leaves, stems and roots. Has a consensus carboxylate-bridged di-iron binding site.; COPPER RESPONSE DEFECT 1 (CRD1); FUNCTIONS IN: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity, DNA binding; INVOLVED IN: chlorophyll biosynthetic process, oxidation reduction, photosynthesis; LOCATED IN: chloroplast thylakoid membrane, chloroplast inner membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase (InterPro:IPR008434), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Rubrerythrin (InterPro:IPR003251). & (gnl|cdd|29774 : 531.0) no description available & (reliability: 1254.0) & (original description: Putative zip, Description = Putative desaturase-like protein, PFAM = PF02915)' T '19.13' 'tetrapyrrole synthesis.divinyl chlorophyllide-a 8-vinyl-reductase' 'niben101scf02752_1263008-1266162' '(at5g18660 : 583.0) Encodes a protein with 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity. Mutants accumulate divinyl chlorophyll rather than monovinyl chlorophyll.; PALE-GREEN AND CHLOROPHYLL B REDUCED 2 (PCB2); FUNCTIONS IN: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G18890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36417 : 233.0) no description available & (reliability: 1166.0) & (original description: Putative DVR, Description = Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic, PFAM = PF13460)' T '19.13' 'tetrapyrrole synthesis.divinyl chlorophyllide-a 8-vinyl-reductase' 'niben101scf04967_180422-183669' '(at5g18660 : 588.0) Encodes a protein with 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity. Mutants accumulate divinyl chlorophyll rather than monovinyl chlorophyll.; PALE-GREEN AND CHLOROPHYLL B REDUCED 2 (PCB2); FUNCTIONS IN: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G18890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36417 : 231.0) no description available & (reliability: 1176.0) & (original description: Putative DVR, Description = Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic, PFAM = PF13460)' T '19.14' 'tetrapyrrole synthesis.protochlorophyllide reductase' 'niben101scf00506_367005-374858' '(q9sdt1|por_dauca : 630.0) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Daucus carota (Carrot) & (at5g54190 : 615.0) light-dependent NADPH:protochlorophyllide oxidoreductase A; protochlorophyllide oxidoreductase A (PORA); FUNCTIONS IN: oxidoreductase activity, protochlorophyllide reductase activity; INVOLVED IN: chlorophyll biosynthetic process, response to ethylene stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Light-dependent protochlorophyllide reductase (InterPro:IPR005979), NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: protochlorophyllide oxidoreductase B (TAIR:AT4G27440.2); Has 5533 Blast hits to 5523 proteins in 759 species: Archae - 38; Bacteria - 1884; Metazoa - 1114; Fungi - 682; Plants - 679; Viruses - 0; Other Eukaryotes - 1136 (source: NCBI BLink). & (gnl|cdd|82229 : 430.0) no description available & (gnl|cdd|36422 : 238.0) no description available & (reliability: 1230.0) & (original description: Putative PORA, Description = Protochlorophyllide reductase A, chloroplastic, PFAM = PF00106)' T '19.14' 'tetrapyrrole synthesis.protochlorophyllide reductase' 'niben101scf01036_288905-293407' '(q41249|pora_cucsa : 607.0) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Cucumis sativus (Cucumber) & (at5g54190 : 585.0) light-dependent NADPH:protochlorophyllide oxidoreductase A; protochlorophyllide oxidoreductase A (PORA); FUNCTIONS IN: oxidoreductase activity, protochlorophyllide reductase activity; INVOLVED IN: chlorophyll biosynthetic process, response to ethylene stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Light-dependent protochlorophyllide reductase (InterPro:IPR005979), NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: protochlorophyllide oxidoreductase B (TAIR:AT4G27440.2); Has 5533 Blast hits to 5523 proteins in 759 species: Archae - 38; Bacteria - 1884; Metazoa - 1114; Fungi - 682; Plants - 679; Viruses - 0; Other Eukaryotes - 1136 (source: NCBI BLink). & (gnl|cdd|82229 : 432.0) no description available & (gnl|cdd|36422 : 243.0) no description available & (reliability: 1170.0) & (original description: Putative PORA, Description = Protochlorophyllide reductase, chloroplastic, PFAM = PF00106)' T '19.14' 'tetrapyrrole synthesis.protochlorophyllide reductase' 'niben101scf06117_90092-94646' '(q9sdt1|por_dauca : 577.0) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Daucus carota (Carrot) & (at5g54190 : 549.0) light-dependent NADPH:protochlorophyllide oxidoreductase A; protochlorophyllide oxidoreductase A (PORA); FUNCTIONS IN: oxidoreductase activity, protochlorophyllide reductase activity; INVOLVED IN: chlorophyll biosynthetic process, response to ethylene stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Light-dependent protochlorophyllide reductase (InterPro:IPR005979), NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: protochlorophyllide oxidoreductase B (TAIR:AT4G27440.2); Has 5533 Blast hits to 5523 proteins in 759 species: Archae - 38; Bacteria - 1884; Metazoa - 1114; Fungi - 682; Plants - 679; Viruses - 0; Other Eukaryotes - 1136 (source: NCBI BLink). & (gnl|cdd|82229 : 430.0) no description available & (gnl|cdd|36422 : 235.0) no description available & (reliability: 1098.0) & (original description: Putative POR1, Description = Protochlorophyllide reductase, chloroplastic, PFAM = PF00106)' T '19.14' 'tetrapyrrole synthesis.protochlorophyllide reductase' 'niben101scf06120_11907-16493' '(q01289|por_pea : 538.0) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Pisum sativum (Garden pea) & (at5g54190 : 523.0) light-dependent NADPH:protochlorophyllide oxidoreductase A; protochlorophyllide oxidoreductase A (PORA); FUNCTIONS IN: oxidoreductase activity, protochlorophyllide reductase activity; INVOLVED IN: chlorophyll biosynthetic process, response to ethylene stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Light-dependent protochlorophyllide reductase (InterPro:IPR005979), NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: protochlorophyllide oxidoreductase B (TAIR:AT4G27440.2); Has 5533 Blast hits to 5523 proteins in 759 species: Archae - 38; Bacteria - 1884; Metazoa - 1114; Fungi - 682; Plants - 679; Viruses - 0; Other Eukaryotes - 1136 (source: NCBI BLink). & (gnl|cdd|82229 : 434.0) no description available & (gnl|cdd|36422 : 236.0) no description available & (reliability: 1046.0) & (original description: Putative 3PCR, Description = Protochlorophyllide reductase, chloroplastic, PFAM = PF00106)' T '19.15' 'tetrapyrrole synthesis.chlorophyll synthase' 'niben101scf00149_650188-658997' '(at3g51820 : 578.0) Encodes a protein with chlorophyll synthase activity. This enzyme has been shown to perform the esterification of chlorophyllide (a and b), the last step of chlorophyll biosynthesis. Although it can use either geranylgeranyl pyrophosphate (GGPP) or phytyl pyrophosphate (PhyPP) as substrates, the esterification reaction was faster with GGPP than with PhyPP.; G4; FUNCTIONS IN: chlorophyll synthetase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Bacteriochlorophyll/chlorophyll synthetase (InterPro:IPR006372), Chlorophyll synthase, ChlG (InterPro:IPR011799), UbiA prenyltransferase (InterPro:IPR000537); BEST Arabidopsis thaliana protein match is: homogentisate prenyltransferase (TAIR:AT3G11945.1); Has 2782 Blast hits to 2782 proteins in 800 species: Archae - 310; Bacteria - 1584; Metazoa - 63; Fungi - 24; Plants - 236; Viruses - 0; Other Eukaryotes - 565 (source: NCBI BLink). & (gnl|cdd|82277 : 389.0) no description available & (reliability: 1156.0) & (original description: Putative chlg, Description = Chlorophyll synthase, PFAM = PF01040)' T '19.16' 'tetrapyrrole synthesis.chlorophyll b synthase' 'nbv0.3scaffold33379_4396-11449' '(at1g44446 : 788.0) Encodes chlorophyllide a oxygenase which converts chlorophyllide a to chlorophyllide b by catalyzing two successive hydroxylations at the 7-methyl group of chlorophyllide a . Mutants are deficient in pigments that associate with thylakoid membrane proteins, lacking chlorophyll b and light-harvesting proteins of photosystem II. The protein was shown through cross-linking experiments to interact with Toc75, Toc34, Tic40, Tic20 and Tic22.; CHLORINA 1 (CH1); CONTAINS InterPro DOMAIN/s: Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site (InterPro:IPR015881), Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941); BEST Arabidopsis thaliana protein match is: translocon at the inner envelope membrane of chloroplasts 55-II (TAIR:AT2G24820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8s7e1|cao_orysa : 774.0) Chlorophyllide a oxygenase, chloroplast precursor (EC 1.13.12.14) (Chlorophyll a oxygenase) (Chlorophyll b synthase) - Oryza sativa (Rice) & (gnl|cdd|58565 : 243.0) no description available & (reliability: 1576.0) & (original description: Putative CAO, Description = Chlorophyllide a oxygenase, chloroplastic, PFAM = PF00355;PF08417)' T '19.16' 'tetrapyrrole synthesis.chlorophyll b synthase' 'niben101scf01166_822638-827946' '(at1g44446 : 816.0) Encodes chlorophyllide a oxygenase which converts chlorophyllide a to chlorophyllide b by catalyzing two successive hydroxylations at the 7-methyl group of chlorophyllide a . Mutants are deficient in pigments that associate with thylakoid membrane proteins, lacking chlorophyll b and light-harvesting proteins of photosystem II. The protein was shown through cross-linking experiments to interact with Toc75, Toc34, Tic40, Tic20 and Tic22.; CHLORINA 1 (CH1); CONTAINS InterPro DOMAIN/s: Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site (InterPro:IPR015881), Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941); BEST Arabidopsis thaliana protein match is: translocon at the inner envelope membrane of chloroplasts 55-II (TAIR:AT2G24820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8s7e1|cao_orysa : 795.0) Chlorophyllide a oxygenase, chloroplast precursor (EC 1.13.12.14) (Chlorophyll a oxygenase) (Chlorophyll b synthase) - Oryza sativa (Rice) & (gnl|cdd|58565 : 241.0) no description available & (reliability: 1632.0) & (original description: Putative CAO, Description = Chlorophyllide a oxygenase, chloroplastic, PFAM = PF00355;PF08417)' T '19.16' 'tetrapyrrole synthesis.chlorophyll b synthase' 'niben101scf03804_164753-170653' '(at1g44446 : 820.0) Encodes chlorophyllide a oxygenase which converts chlorophyllide a to chlorophyllide b by catalyzing two successive hydroxylations at the 7-methyl group of chlorophyllide a . Mutants are deficient in pigments that associate with thylakoid membrane proteins, lacking chlorophyll b and light-harvesting proteins of photosystem II. The protein was shown through cross-linking experiments to interact with Toc75, Toc34, Tic40, Tic20 and Tic22.; CHLORINA 1 (CH1); CONTAINS InterPro DOMAIN/s: Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site (InterPro:IPR015881), Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941); BEST Arabidopsis thaliana protein match is: translocon at the inner envelope membrane of chloroplasts 55-II (TAIR:AT2G24820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8s7e1|cao_orysa : 796.0) Chlorophyllide a oxygenase, chloroplast precursor (EC 1.13.12.14) (Chlorophyll a oxygenase) (Chlorophyll b synthase) - Oryza sativa (Rice) & (gnl|cdd|58565 : 240.0) no description available & (reliability: 1640.0) & (original description: Putative CAO, Description = Chlorophyllide a oxygenase, chloroplastic, PFAM = PF00355;PF08417)' T '19.16' 'tetrapyrrole synthesis.chlorophyll b synthase' 'niben101scf10528_223750-230858' '(at1g44446 : 813.0) Encodes chlorophyllide a oxygenase which converts chlorophyllide a to chlorophyllide b by catalyzing two successive hydroxylations at the 7-methyl group of chlorophyllide a . Mutants are deficient in pigments that associate with thylakoid membrane proteins, lacking chlorophyll b and light-harvesting proteins of photosystem II. The protein was shown through cross-linking experiments to interact with Toc75, Toc34, Tic40, Tic20 and Tic22.; CHLORINA 1 (CH1); CONTAINS InterPro DOMAIN/s: Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site (InterPro:IPR015881), Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941); BEST Arabidopsis thaliana protein match is: translocon at the inner envelope membrane of chloroplasts 55-II (TAIR:AT2G24820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8s7e1|cao_orysa : 790.0) Chlorophyllide a oxygenase, chloroplast precursor (EC 1.13.12.14) (Chlorophyll a oxygenase) (Chlorophyll b synthase) - Oryza sativa (Rice) & (gnl|cdd|58565 : 240.0) no description available & (reliability: 1626.0) & (original description: Putative CAO, Description = Chlorophyllide a oxygenase, chloroplastic, PFAM = PF00355;PF08417)' T '19.20' 'tetrapyrrole synthesis.ferrochelatase' 'nbv0.3scaffold69319_5434-9467' '(p42044|hemh_cucsa : 433.0) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1) (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) - Cucumis sativus (Cucumber) & (at5g26030 : 404.0) encodes ferrochelatase I located in plastids. Involved in heme biosynthesis in non-photosynthetic tissues and induced by oxidative stress in photosynthetic tissues to supply heme for defensive hemoproteins; ferrochelatase 1 (FC1); FUNCTIONS IN: ferrochelatase activity; INVOLVED IN: response to oxidative stress, heme biosynthetic process, tetrapyrrole biosynthetic process; LOCATED IN: mitochondrion, chloroplast, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ferrochelatase, active site (InterPro:IPR019772), Ferrochelatase (InterPro:IPR001015); BEST Arabidopsis thaliana protein match is: ferrochelatase 2 (TAIR:AT2G30390.1); Has 7391 Blast hits to 7389 proteins in 2072 species: Archae - 19; Bacteria - 4136; Metazoa - 176; Fungi - 140; Plants - 115; Viruses - 0; Other Eukaryotes - 2805 (source: NCBI BLink). & (gnl|cdd|36535 : 312.0) no description available & (gnl|cdd|85011 : 265.0) no description available & (reliability: 808.0) & (original description: Putative hemH, Description = Ferrochelatase, PFAM = PF00762)' T '19.20' 'tetrapyrrole synthesis.ferrochelatase' 'nbv0.5scaffold6133_63470-74279' '(p42044|hemh_cucsa : 598.0) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1) (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) - Cucumis sativus (Cucumber) & (at5g26030 : 557.0) encodes ferrochelatase I located in plastids. Involved in heme biosynthesis in non-photosynthetic tissues and induced by oxidative stress in photosynthetic tissues to supply heme for defensive hemoproteins; ferrochelatase 1 (FC1); FUNCTIONS IN: ferrochelatase activity; INVOLVED IN: response to oxidative stress, heme biosynthetic process, tetrapyrrole biosynthetic process; LOCATED IN: mitochondrion, chloroplast, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ferrochelatase, active site (InterPro:IPR019772), Ferrochelatase (InterPro:IPR001015); BEST Arabidopsis thaliana protein match is: ferrochelatase 2 (TAIR:AT2G30390.1); Has 7391 Blast hits to 7389 proteins in 2072 species: Archae - 19; Bacteria - 4136; Metazoa - 176; Fungi - 140; Plants - 115; Viruses - 0; Other Eukaryotes - 2805 (source: NCBI BLink). & (gnl|cdd|36535 : 455.0) no description available & (gnl|cdd|85011 : 394.0) no description available & (reliability: 1114.0) & (original description: Putative HEMH, Description = Ferrochelatase-2, chloroplastic, PFAM = PF00762;PF00762)' T '19.20' 'tetrapyrrole synthesis.ferrochelatase' 'niben044scf00051970ctg002_1-8132' '(p42044|hemh_cucsa : 416.0) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1) (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) - Cucumis sativus (Cucumber) & (at5g26030 : 374.0) encodes ferrochelatase I located in plastids. Involved in heme biosynthesis in non-photosynthetic tissues and induced by oxidative stress in photosynthetic tissues to supply heme for defensive hemoproteins; ferrochelatase 1 (FC1); FUNCTIONS IN: ferrochelatase activity; INVOLVED IN: response to oxidative stress, heme biosynthetic process, tetrapyrrole biosynthetic process; LOCATED IN: mitochondrion, chloroplast, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ferrochelatase, active site (InterPro:IPR019772), Ferrochelatase (InterPro:IPR001015); BEST Arabidopsis thaliana protein match is: ferrochelatase 2 (TAIR:AT2G30390.1); Has 7391 Blast hits to 7389 proteins in 2072 species: Archae - 19; Bacteria - 4136; Metazoa - 176; Fungi - 140; Plants - 115; Viruses - 0; Other Eukaryotes - 2805 (source: NCBI BLink). & (gnl|cdd|36535 : 324.0) no description available & (gnl|cdd|85011 : 287.0) no description available & (reliability: 748.0) & (original description: Putative hemH, Description = Ferrochelatase, PFAM = PF00762)' T '19.20' 'tetrapyrrole synthesis.ferrochelatase' 'niben101scf06955_273358-287128' '(at2g30390 : 696.0) Encodes one of two ferrochelatase genes in Arabidopsis. Ferrochelatase is the terminal enzyme of heme biosynthesis. FC-II is speculated to operate in photosynthetic cytochromes; ferrochelatase 2 (FC2); FUNCTIONS IN: ferrochelatase activity; INVOLVED IN: heme biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferrochelatase (InterPro:IPR001015), Ferrochelatase, active site (InterPro:IPR019772); BEST Arabidopsis thaliana protein match is: ferrochelatase 1 (TAIR:AT5G26030.2). & (o22101|hemh_orysa : 692.0) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1) (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) - Oryza sativa (Rice) & (gnl|cdd|36535 : 501.0) no description available & (gnl|cdd|85011 : 420.0) no description available & (reliability: 1392.0) & (original description: Putative hemH, Description = Ferrochelatase, PFAM = PF00762)' T '19.21' 'tetrapyrrole synthesis.heme oxygenase' 'nbv0.3scaffold10044_1-4510' '(at2g26550 : 268.0) Encodes a heme oxygenase-like protein lacking the conserved histidine residue at the active site that is usually involved in heme-iron coordination. It is unable to bind and degrade heme. Mutant analyses suggest a role in photomorphogenesis. The protein can bind the heme precursor, proto IX, which could be biologically significant and point to a role in the regulation of the two tetrapyrrole biosynthetic pathways.; heme oxygenase 2 (HO2); CONTAINS InterPro DOMAIN/s: Haem oxygenase-like, multi-helical (InterPro:IPR016084), Haem oxygenase-like (InterPro:IPR016053), Haem oxygenase (decyclizing), plant (InterPro:IPR016951); BEST Arabidopsis thaliana protein match is: Plant haem oxygenase (decyclizing) family protein (TAIR:AT2G26670.1). & (gnl|cdd|39680 : 217.0) no description available & (gnl|cdd|29310 : 151.0) no description available & (reliability: 536.0) & (original description: Putative HO3, Description = Heme oxygenase 3, chloroplastic, PFAM = PF01126)' T '19.21' 'tetrapyrrole synthesis.heme oxygenase' 'niben044scf00001374ctg006_12045-16549' '(at2g26550 : 270.0) Encodes a heme oxygenase-like protein lacking the conserved histidine residue at the active site that is usually involved in heme-iron coordination. It is unable to bind and degrade heme. Mutant analyses suggest a role in photomorphogenesis. The protein can bind the heme precursor, proto IX, which could be biologically significant and point to a role in the regulation of the two tetrapyrrole biosynthetic pathways.; heme oxygenase 2 (HO2); CONTAINS InterPro DOMAIN/s: Haem oxygenase-like, multi-helical (InterPro:IPR016084), Haem oxygenase-like (InterPro:IPR016053), Haem oxygenase (decyclizing), plant (InterPro:IPR016951); BEST Arabidopsis thaliana protein match is: Plant haem oxygenase (decyclizing) family protein (TAIR:AT2G26670.1). & (gnl|cdd|39680 : 214.0) no description available & (gnl|cdd|29310 : 149.0) no description available & (reliability: 540.0) & (original description: Putative HO2, Description = Probable inactive heme oxygenase 2, chloroplastic, PFAM = PF01126)' T '19.21' 'tetrapyrrole synthesis.heme oxygenase' 'niben101scf01385_1188418-1198986' '(at2g26550 : 271.0) Encodes a heme oxygenase-like protein lacking the conserved histidine residue at the active site that is usually involved in heme-iron coordination. It is unable to bind and degrade heme. Mutant analyses suggest a role in photomorphogenesis. The protein can bind the heme precursor, proto IX, which could be biologically significant and point to a role in the regulation of the two tetrapyrrole biosynthetic pathways.; heme oxygenase 2 (HO2); CONTAINS InterPro DOMAIN/s: Haem oxygenase-like, multi-helical (InterPro:IPR016084), Haem oxygenase-like (InterPro:IPR016053), Haem oxygenase (decyclizing), plant (InterPro:IPR016951); BEST Arabidopsis thaliana protein match is: Plant haem oxygenase (decyclizing) family protein (TAIR:AT2G26670.1). & (gnl|cdd|39680 : 216.0) no description available & (gnl|cdd|29310 : 152.0) no description available & (reliability: 542.0) & (original description: Putative HO1, Description = Heme oxygenase 1, chloroplastic, PFAM = PF01126)' T '19.21' 'tetrapyrrole synthesis.heme oxygenase' 'niben101scf06347_461246-469401' '(at2g26670 : 362.0) Encodes a plastid heme oxygenase necessary for phytochrome chromophore biosynthesis and for coupling the expression of some nuclear genes to the functional state of the chloroplast.; REVERSAL OF THE DET PHENOTYPE 4 (TED4); FUNCTIONS IN: heme oxygenase (decyclizing) activity, heme binding; INVOLVED IN: regulation of meristem growth, heme oxidation, red, far-red light phototransduction, chloroplast-nucleus signaling pathway, phytochromobilin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem oxygenase-like, multi-helical (InterPro:IPR016084), Haem oxygenase-like (InterPro:IPR016053); BEST Arabidopsis thaliana protein match is: heme oxygenase 3 (TAIR:AT1G69720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39680 : 248.0) no description available & (gnl|cdd|29310 : 155.0) no description available & (reliability: 724.0) & (original description: Putative HO1, Description = Heme oxygenase 1, chloroplastic, PFAM = PF01126)' T '19.30' 'tetrapyrrole synthesis.uroporphyrin-III C-methyltransferase' 'nbv0.5scaffold5984_88670-94195' '(at5g40850 : 511.0) Encodes a urophorphyrin III methylase that catalyzes S-adenosyl-L-methionine-dependent transmethylation in a multistep process involving the formation of a covalently linked complex with S-adenosyl-L-methionine.; urophorphyrin methylase 1 (UPM1); CONTAINS InterPro DOMAIN/s: Tetrapyrrole methylase (InterPro:IPR000878), Tetrapyrrole methylase, subdomain 1 (InterPro:IPR014777), Uroporphyrin-III C-methyltransferase, C-terminal (InterPro:IPR006366), Tetrapyrrole methylase, subdomain 2 (InterPro:IPR014776), Uroporphiryn-III C-methyltransferase, conserved site (InterPro:IPR003043). & (gnl|cdd|36740 : 381.0) no description available & (gnl|cdd|81856 : 297.0) no description available & (reliability: 1022.0) & (original description: Putative nirE, Description = Uroporphyrinogen-III methyltransferase, PFAM = PF00590)' T '19.30' 'tetrapyrrole synthesis.uroporphyrin-III C-methyltransferase' 'niben101scf06162_130349-135802' '(at5g40850 : 518.0) Encodes a urophorphyrin III methylase that catalyzes S-adenosyl-L-methionine-dependent transmethylation in a multistep process involving the formation of a covalently linked complex with S-adenosyl-L-methionine.; urophorphyrin methylase 1 (UPM1); CONTAINS InterPro DOMAIN/s: Tetrapyrrole methylase (InterPro:IPR000878), Tetrapyrrole methylase, subdomain 1 (InterPro:IPR014777), Uroporphyrin-III C-methyltransferase, C-terminal (InterPro:IPR006366), Tetrapyrrole methylase, subdomain 2 (InterPro:IPR014776), Uroporphiryn-III C-methyltransferase, conserved site (InterPro:IPR003043). & (gnl|cdd|36740 : 382.0) no description available & (gnl|cdd|81856 : 296.0) no description available & (reliability: 1036.0) & (original description: Putative nirE, Description = Uroporphyrin-III C-methyltransferase, PFAM = PF00590)' T '19.32' 'tetrapyrrole synthesis.sirohydrochlorin ferrochelatase' 'niben101scf08227_5112-10464' '(at1g50170 : 253.0) encodes sirohydrochlorin ferrochelatase catalyzing the last step of the siroheme biosynthesis; sirohydrochlorin ferrochelatase B (SIRB); FUNCTIONS IN: sirohydrochlorin ferrochelatase activity; INVOLVED IN: response to oxidative stress, siroheme biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12) biosynthesis CbiX (InterPro:IPR002762); Has 1927 Blast hits to 1707 proteins in 620 species: Archae - 186; Bacteria - 1447; Metazoa - 1; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 248 (source: NCBI BLink). & (gnl|cdd|85754 : 118.0) no description available & (reliability: 506.0) & (original description: Putative cbiX, Description = Sirohydrochlorin ferrochelatase, PFAM = PF01903)' T '19.33' 'tetrapyrrole synthesis.5-aminolevulinate synthase' '' '' '19.40' 'tetrapyrrole synthesis.regulation' 'nbv0.3scaffold4972_54714-61872' '(at3g14110 : 321.0) Encodes a novel coiled-coil, TPR domain containing protein that is localized to the chloroplast membrane and is involved in chlorophyll biosynthesis. Mutants accumulate protochlorophyllide, an intermediate in the chlorophyll biosynthesis pathway, in dark and release singlet oxygen in plastids in a controlled and non-invasive manner upon a dark/light shift.; FLUORESCENT IN BLUE LIGHT (FLU); FUNCTIONS IN: binding; INVOLVED IN: chlorophyll biosynthetic process, oxylipin biosynthetic process, response to singlet oxygen; LOCATED IN: chloroplast thylakoid membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026). & (reliability: 642.0) & (original description: Putative FLU, Description = Protein FLUORESCENT IN BLUE LIGHT, chloroplastic, PFAM = PF13424)' T '19.40' 'tetrapyrrole synthesis.regulation' 'nbv0.5scaffold2355_92715-95497' '(at3g59400 : 215.0) GUN, genomes uncoupled, is necessary for coupling the expression of some nuclear genes to the functional state of the chloroplast. Binds to the magnesium chelatase complex and promotes formation of the substrate,a tetrapyrrole signaling molecule. Porphyrin-binding protein that enhances the activity of Mg-chelatase. Although required for chlorophyll accumulation under normal growth conditions, GUN4 is not essential for chlorophyll synthesis.; GENOMES UNCOUPLED 4 (GUN4); FUNCTIONS IN: tetrapyrrole binding, enzyme binding; INVOLVED IN: chlorophyll biosynthetic process, chloroplast-nucleus signaling pathway, positive regulation of catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GUN4-like (InterPro:IPR008629); Has 685 Blast hits to 680 proteins in 101 species: Archae - 0; Bacteria - 474; Metazoa - 4; Fungi - 2; Plants - 53; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (gnl|cdd|86866 : 165.0) no description available & (reliability: 430.0) & (original description: Putative GUN4, Description = Tetrapyrrole-binding protein, PFAM = PF05419)' T '19.40' 'tetrapyrrole synthesis.regulation' 'niben044scf00002134ctg024_10407-13189' '(at3g59400 : 216.0) GUN, genomes uncoupled, is necessary for coupling the expression of some nuclear genes to the functional state of the chloroplast. Binds to the magnesium chelatase complex and promotes formation of the substrate,a tetrapyrrole signaling molecule. Porphyrin-binding protein that enhances the activity of Mg-chelatase. Although required for chlorophyll accumulation under normal growth conditions, GUN4 is not essential for chlorophyll synthesis.; GENOMES UNCOUPLED 4 (GUN4); FUNCTIONS IN: tetrapyrrole binding, enzyme binding; INVOLVED IN: chlorophyll biosynthetic process, chloroplast-nucleus signaling pathway, positive regulation of catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GUN4-like (InterPro:IPR008629); Has 685 Blast hits to 680 proteins in 101 species: Archae - 0; Bacteria - 474; Metazoa - 4; Fungi - 2; Plants - 53; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (gnl|cdd|86866 : 167.0) no description available & (reliability: 432.0) & (original description: Putative GUN4, Description = Tetrapyrrole-binding protein, PFAM = PF05419)' T '19.40' 'tetrapyrrole synthesis.regulation' 'niben044scf00047740ctg003_5232-12422' '(at3g14110 : 323.0) Encodes a novel coiled-coil, TPR domain containing protein that is localized to the chloroplast membrane and is involved in chlorophyll biosynthesis. Mutants accumulate protochlorophyllide, an intermediate in the chlorophyll biosynthesis pathway, in dark and release singlet oxygen in plastids in a controlled and non-invasive manner upon a dark/light shift.; FLUORESCENT IN BLUE LIGHT (FLU); FUNCTIONS IN: binding; INVOLVED IN: chlorophyll biosynthetic process, oxylipin biosynthetic process, response to singlet oxygen; LOCATED IN: chloroplast thylakoid membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026). & (reliability: 646.0) & (original description: Putative FLU, Description = Protein flourescent in blue light, PFAM = PF13424)' T '19.40' 'tetrapyrrole synthesis.regulation' 'niben101scf03113_304715-309143' '(at3g59400 : 213.0) GUN, genomes uncoupled, is necessary for coupling the expression of some nuclear genes to the functional state of the chloroplast. Binds to the magnesium chelatase complex and promotes formation of the substrate,a tetrapyrrole signaling molecule. Porphyrin-binding protein that enhances the activity of Mg-chelatase. Although required for chlorophyll accumulation under normal growth conditions, GUN4 is not essential for chlorophyll synthesis.; GENOMES UNCOUPLED 4 (GUN4); FUNCTIONS IN: tetrapyrrole binding, enzyme binding; INVOLVED IN: chlorophyll biosynthetic process, chloroplast-nucleus signaling pathway, positive regulation of catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GUN4-like (InterPro:IPR008629); Has 685 Blast hits to 680 proteins in 101 species: Archae - 0; Bacteria - 474; Metazoa - 4; Fungi - 2; Plants - 53; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (gnl|cdd|86866 : 162.0) no description available & (reliability: 426.0) & (original description: Putative GUN4, Description = Tetrapyrrole-binding protein, PFAM = PF05419)' T '19.40' 'tetrapyrrole synthesis.regulation' 'niben101scf32746_97062-103736' '(at3g14110 : 292.0) Encodes a novel coiled-coil, TPR domain containing protein that is localized to the chloroplast membrane and is involved in chlorophyll biosynthesis. Mutants accumulate protochlorophyllide, an intermediate in the chlorophyll biosynthesis pathway, in dark and release singlet oxygen in plastids in a controlled and non-invasive manner upon a dark/light shift.; FLUORESCENT IN BLUE LIGHT (FLU); FUNCTIONS IN: binding; INVOLVED IN: chlorophyll biosynthetic process, oxylipin biosynthetic process, response to singlet oxygen; LOCATED IN: chloroplast thylakoid membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026). & (reliability: 584.0) & (original description: Putative FLU, Description = Protein flourescent in blue light, PFAM = PF13424)' T '19.99' 'tetrapyrrole synthesis.unspecified' 'nbv0.5scaffold149_567188-979358' '(at3g02280 : 810.0) Flavodoxin family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709); BEST Arabidopsis thaliana protein match is: P450 reductase 1 (TAIR:AT4G24520.1); Has 7053 Blast hits to 6598 proteins in 1587 species: Archae - 9; Bacteria - 3832; Metazoa - 1042; Fungi - 865; Plants - 492; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (gnl|cdd|36374 : 626.0) no description available & (gnl|cdd|30718 : 398.0) no description available & (q05001|ncpr_catro : 214.0) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 1620.0) & (original description: Putative ATR3, Description = NADPH-dependent diflavin oxidoreductase 1, PFAM = PF00258;PF00175;PF00667)' T '19.99' 'tetrapyrrole synthesis.unspecified' 'niben044scf00016086ctg002_924-4286' '(at1g17100 : 225.0) SOUL heme-binding family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SOUL haem-binding protein (InterPro:IPR006917); BEST Arabidopsis thaliana protein match is: SOUL heme-binding family protein (TAIR:AT1G78450.1); Has 1318 Blast hits to 1294 proteins in 131 species: Archae - 15; Bacteria - 114; Metazoa - 250; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (gnl|cdd|68407 : 205.0) no description available & (reliability: 450.0) & (original description: Putative Os01g0210500, Description = Os01g0210500 protein, PFAM = PF04832)' T '19.99' 'tetrapyrrole synthesis.unspecified' 'niben044scf00055256ctg000_1-3023' '(gnl|cdd|68407 : 189.0) no description available & (at1g17100 : 143.0) SOUL heme-binding family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SOUL haem-binding protein (InterPro:IPR006917); BEST Arabidopsis thaliana protein match is: SOUL heme-binding family protein (TAIR:AT1G78450.1); Has 1318 Blast hits to 1294 proteins in 131 species: Archae - 15; Bacteria - 114; Metazoa - 250; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative Os01g0235300, Description = Os01g0235300 protein, PFAM = PF04832)' T '19.99' 'tetrapyrrole synthesis.unspecified' 'niben101scf00831_135340-138683' '(gnl|cdd|70680 : 272.0) no description available & (at5g43860 : 231.0) Encodes a chlorophyllase, the first enzyme in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to chlorophyllide and phytol. AtCLH2 has a typical signal sequence for the chloroplast. Gene expression does not respond to methyljasmonate, a known promoter of senescence and chlorophyll degradation.; chlorophyllase 2 (CLH2); CONTAINS InterPro DOMAIN/s: Chlorophyllase-like (InterPro:IPR010821), Chlorophyllase, chloroplast (InterPro:IPR017395); BEST Arabidopsis thaliana protein match is: chlorophyllase 1 (TAIR:AT1G19670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9mv14|clh1_citsi : 189.0) Chlorophyllase-1, chloroplast precursor (EC 3.1.1.14) (Chlorophyll-chlorophyllido hydrolase 1) (Chlase 1) - Citrus sinensis (Sweet orange) & (reliability: 462.0) & (original description: Putative CLH1, Description = Chlorophyllase, PFAM = PF12740)' T '19.99' 'tetrapyrrole synthesis.unspecified' 'niben101scf01609_35815-38920' '(at5g43860 : 375.0) Encodes a chlorophyllase, the first enzyme in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to chlorophyllide and phytol. AtCLH2 has a typical signal sequence for the chloroplast. Gene expression does not respond to methyljasmonate, a known promoter of senescence and chlorophyll degradation.; chlorophyllase 2 (CLH2); CONTAINS InterPro DOMAIN/s: Chlorophyllase-like (InterPro:IPR010821), Chlorophyllase, chloroplast (InterPro:IPR017395); BEST Arabidopsis thaliana protein match is: chlorophyllase 1 (TAIR:AT1G19670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70680 : 367.0) no description available & (q9mv14|clh1_citsi : 214.0) Chlorophyllase-1, chloroplast precursor (EC 3.1.1.14) (Chlorophyll-chlorophyllido hydrolase 1) (Chlase 1) - Citrus sinensis (Sweet orange) & (reliability: 750.0) & (original description: Putative CLH2, Description = Chlorophyllase-2, chloroplastic, PFAM = PF07224)' T '19.99' 'tetrapyrrole synthesis.unspecified' 'niben101scf02725_596420-599987' '(at1g17100 : 221.0) SOUL heme-binding family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SOUL haem-binding protein (InterPro:IPR006917); BEST Arabidopsis thaliana protein match is: SOUL heme-binding family protein (TAIR:AT1G78450.1); Has 1318 Blast hits to 1294 proteins in 131 species: Archae - 15; Bacteria - 114; Metazoa - 250; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (gnl|cdd|68407 : 200.0) no description available & (reliability: 442.0) & (original description: Putative Os01g0210500, Description = Os01g0210500 protein, PFAM = PF04832)' T '19.99' 'tetrapyrrole synthesis.unspecified' 'niben101scf03445_259610-266107' '(gnl|cdd|68407 : 189.0) no description available & (at1g17100 : 140.0) SOUL heme-binding family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SOUL haem-binding protein (InterPro:IPR006917); BEST Arabidopsis thaliana protein match is: SOUL heme-binding family protein (TAIR:AT1G78450.1); Has 1318 Blast hits to 1294 proteins in 131 species: Archae - 15; Bacteria - 114; Metazoa - 250; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative Os01g0235300, Description = Os01g0235300 protein, PFAM = PF04832)' T '19.99' 'tetrapyrrole synthesis.unspecified' 'niben101scf08470_688284-691742' '(at5g43860 : 374.0) Encodes a chlorophyllase, the first enzyme in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to chlorophyllide and phytol. AtCLH2 has a typical signal sequence for the chloroplast. Gene expression does not respond to methyljasmonate, a known promoter of senescence and chlorophyll degradation.; chlorophyllase 2 (CLH2); CONTAINS InterPro DOMAIN/s: Chlorophyllase-like (InterPro:IPR010821), Chlorophyllase, chloroplast (InterPro:IPR017395); BEST Arabidopsis thaliana protein match is: chlorophyllase 1 (TAIR:AT1G19670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70680 : 364.0) no description available & (q9mv14|clh1_citsi : 202.0) Chlorophyllase-1, chloroplast precursor (EC 3.1.1.14) (Chlorophyll-chlorophyllido hydrolase 1) (Chlase 1) - Citrus sinensis (Sweet orange) & (reliability: 748.0) & (original description: Putative CLH2, Description = Chlorophyllase-2, chloroplastic, PFAM = PF07224)' T '19.99' 'tetrapyrrole synthesis.unspecified' 'niben101scf09372_119480-134462' '(at3g02280 : 834.0) Flavodoxin family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709); BEST Arabidopsis thaliana protein match is: P450 reductase 1 (TAIR:AT4G24520.1); Has 7053 Blast hits to 6598 proteins in 1587 species: Archae - 9; Bacteria - 3832; Metazoa - 1042; Fungi - 865; Plants - 492; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (gnl|cdd|36374 : 634.0) no description available & (gnl|cdd|30718 : 400.0) no description available & (q05001|ncpr_catro : 244.0) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 1668.0) & (original description: Putative ATR3, Description = NADPH-dependent diflavin oxidoreductase 1, PFAM = PF00258;PF00667;PF00175)' T '19.99' 'tetrapyrrole synthesis.unspecified' 'niben101scf09372_119974-123043' '(at3g02280 : 382.0) Flavodoxin family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709); BEST Arabidopsis thaliana protein match is: P450 reductase 1 (TAIR:AT4G24520.1); Has 7053 Blast hits to 6598 proteins in 1587 species: Archae - 9; Bacteria - 3832; Metazoa - 1042; Fungi - 865; Plants - 492; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (gnl|cdd|36374 : 278.0) no description available & (gnl|cdd|30718 : 244.0) no description available & (q05001|ncpr_catro : 170.0) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 764.0) & (original description: Putative NDOR1, Description = NADPH-dependent diflavin oxidoreductase 1, PFAM = PF00667;PF00175)' T '19.99' 'tetrapyrrole synthesis.unspecified' 'niben101scf10418_15226-24755' '(at2g44520 : 468.0) cytochrome c oxidase 10 (COX10); FUNCTIONS IN: protoheme IX farnesyltransferase activity, prenyltransferase activity; INVOLVED IN: heme o biosynthetic process, heme biosynthetic process; LOCATED IN: integral to membrane, mitochondrial membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protohaem IX farnesyltransferase, mitochondria (InterPro:IPR016315), Protohaem IX farnesyltransferase (InterPro:IPR006369), UbiA prenyltransferase (InterPro:IPR000537); Has 7990 Blast hits to 7990 proteins in 1845 species: Archae - 160; Bacteria - 4430; Metazoa - 177; Fungi - 179; Plants - 66; Viruses - 0; Other Eukaryotes - 2978 (source: NCBI BLink). & (gnl|cdd|36594 : 352.0) no description available & (gnl|cdd|30458 : 213.0) no description available & (reliability: 936.0) & (original description: Putative COX10, Description = Protoheme IX farnesyltransferase, mitochondrial, PFAM = PF01040)' T '20' 'stress' 'nbv0.3scaffold56814_4251-12873' '(at3g16030 : 356.0) CALLUS EXPRESSION OF RBCS 101 (CES101); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT4G21390.1); Has 121576 Blast hits to 119500 proteins in 4422 species: Archae - 101; Bacteria - 13477; Metazoa - 44302; Fungi - 10440; Plants - 35232; Viruses - 450; Other Eukaryotes - 17574 (source: NCBI BLink). & (gnl|cdd|36401 : 314.0) no description available & (gnl|cdd|47913 : 231.0) no description available & (q8l4h4|nork_medtr : 207.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 662.0) & (original description: Putative Chrk1, Description = Receptor-like kinase CHRK1, PFAM = PF00704;PF07714)' T '20' 'stress' 'nbv0.5scaffold884_47543-55928' '(at1g62740 : 761.0) stress-inducible protein, putative; FUNCTIONS IN: binding; INVOLVED IN: response to cadmium ion, response to stress; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: stress-inducible protein, putative (TAIR:AT1G12270.1); Has 44605 Blast hits to 18649 proteins in 1479 species: Archae - 1696; Bacteria - 14533; Metazoa - 9820; Fungi - 2891; Plants - 3854; Viruses - 4; Other Eukaryotes - 11807 (source: NCBI BLink). & (q43468|stip_soybn : 634.0) Heat shock protein STI (Stress-inducible protein) (GmSTI) - Glycine max (Soybean) & (gnl|cdd|35768 : 594.0) no description available & (reliability: 1522.0) & (original description: Putative hop, Description = Stress-induced-phosphoprotein 1, PFAM = PF13181;PF13432;PF00515;PF13414)' T '20' 'stress' 'niben044scf00011613ctg012_2983-5831' '(at1g12270 : 300.0) stress-inducible protein, putative; FUNCTIONS IN: binding; INVOLVED IN: response to stress; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: stress-inducible protein, putative (TAIR:AT1G62740.1); Has 37869 Blast hits to 17250 proteins in 1367 species: Archae - 1337; Bacteria - 11482; Metazoa - 9184; Fungi - 2650; Plants - 3694; Viruses - 39; Other Eukaryotes - 9483 (source: NCBI BLink). & (gnl|cdd|35768 : 263.0) no description available & (q43468|stip_soybn : 190.0) Heat shock protein STI (Stress-inducible protein) (GmSTI) - Glycine max (Soybean) & (reliability: 600.0) & (original description: Putative hop, Description = Stress-induced-phosphoprotein 1, PFAM = PF00515;PF13414)' T '20' 'stress' 'niben101scf00735_630391-632692' '(gnl|cdd|70078 : 123.0) no description available & (at1g01170 : 114.0) Protein of unknown function (DUF1138); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1138 (InterPro:IPR009515); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1138) (TAIR:AT4G00860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative ATOZI1, Description = AT0ZI1 protein, PFAM = PF06592)' T '20' 'stress' 'niben101scf01826_524171-526704' '(at4g03230 : 154.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G11340.1); Has 120947 Blast hits to 117758 proteins in 4568 species: Archae - 89; Bacteria - 13334; Metazoa - 43594; Fungi - 9240; Plants - 36995; Viruses - 386; Other Eukaryotes - 17309 (source: NCBI BLink). & (gnl|cdd|36401 : 101.0) no description available & (reliability: 278.0) & (original description: Putative IRK1, Description = Serine/threonine-protein kinase, PFAM = PF07714;PF11883)' T '20' 'stress' 'niben101scf02832_407589-412023' '(at4g34190 : 115.0) Encodes a stress enhanced protein that localizes to the thylakoid membrane and whose mRNA is upregulated in response to high light intensity. It may be involved in chlorophyll binding.; stress enhanced protein 1 (SEP1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative 37135, Description = Stress enhanced protein 1, chloroplastic, PFAM = )' T '20' 'stress' 'niben101scf03062_183655-187223' '(at5g05350 : 607.0) PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461), Protein of unknown function DUF2985 (InterPro:IPR021369); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT3G10980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86720 : 85.8) no description available & (reliability: 1164.0) & (original description: Putative CPPR, Description = Cys-rich domain protein, PFAM = PF11204;PF04749)' T '20' 'stress' 'niben101scf03374_528090-533827' '(at4g12400 : 747.0) stress-inducible protein, putative; FUNCTIONS IN: binding; INVOLVED IN: response to high light intensity, response to hydrogen peroxide, response to heat, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: stress-inducible protein, putative (TAIR:AT1G62740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q43468|stip_soybn : 630.0) Heat shock protein STI (Stress-inducible protein) (GmSTI) - Glycine max (Soybean) & (gnl|cdd|35768 : 595.0) no description available & (reliability: 1494.0) & (original description: Putative HOP3, Description = Hsp70-Hsp90 organizing protein 3, PFAM = PF13181;PF00515;PF00515;PF13414)' T '20' 'stress' 'niben101scf05299_39171-46066' '(at4g21390 : 334.0) B120; FUNCTIONS IN: protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61610.1); Has 119638 Blast hits to 117946 proteins in 4361 species: Archae - 104; Bacteria - 13356; Metazoa - 43759; Fungi - 9937; Plants - 34742; Viruses - 415; Other Eukaryotes - 17325 (source: NCBI BLink). & (gnl|cdd|36401 : 334.0) no description available & (q8lkz1|nork_pea : 196.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 175.0) no description available & (reliability: 612.0) & (original description: Putative BnaA07g38960D, Description = BnaA07g38960D protein, PFAM = PF07714)' T '20' 'stress' 'niben101scf05830_588929-593481' '(at2g21970 : 207.0) stress enhanced protein 2 (SEP2) chlorophyll a/b-binding protein; stress enhanced protein 2 (SEP2); Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative 37500, Description = Stress enhanced protein 2, chloroplastic, PFAM = PF00504)' T '20' 'stress' 'niben101scf06295_557741-563549' '(at4g23290 : 341.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 21 (CRK21); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 30 (TAIR:AT4G11460.1); Has 118308 Blast hits to 116879 proteins in 4391 species: Archae - 92; Bacteria - 13400; Metazoa - 43403; Fungi - 10140; Plants - 33618; Viruses - 391; Other Eukaryotes - 17264 (source: NCBI BLink). & (gnl|cdd|36401 : 313.0) no description available & (gnl|cdd|47913 : 235.0) no description available & (q8lpb4|pskr_dauca : 203.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 640.0) & (original description: Putative Chrk1, Description = Receptor-like kinase CHRK1, PFAM = PF07714;PF00704)' T '20' 'stress' 'niben101scf06775_119301-121609' '(gnl|cdd|70078 : 114.0) no description available & (at1g01170 : 108.0) Protein of unknown function (DUF1138); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1138 (InterPro:IPR009515); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1138) (TAIR:AT4G00860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative ATOZI1, Description = AT0ZI1 protein, PFAM = PF06592)' T '20' 'stress' 'niben101scf09387_331318-338348' '(at1g62740 : 764.0) stress-inducible protein, putative; FUNCTIONS IN: binding; INVOLVED IN: response to cadmium ion, response to stress; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: stress-inducible protein, putative (TAIR:AT1G12270.1); Has 44605 Blast hits to 18649 proteins in 1479 species: Archae - 1696; Bacteria - 14533; Metazoa - 9820; Fungi - 2891; Plants - 3854; Viruses - 4; Other Eukaryotes - 11807 (source: NCBI BLink). & (q43468|stip_soybn : 634.0) Heat shock protein STI (Stress-inducible protein) (GmSTI) - Glycine max (Soybean) & (gnl|cdd|35768 : 597.0) no description available & (reliability: 1528.0) & (original description: Putative STIP1, Description = Stress-induced-phosphoprotein 1, PFAM = PF13414;PF13432;PF13181;PF00515)' T '20' 'stress' 'niben101scf09698_11536-13991' '(gnl|cdd|70078 : 113.0) no description available & (at1g01170 : 105.0) Protein of unknown function (DUF1138); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1138 (InterPro:IPR009515); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1138) (TAIR:AT4G00860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative ATOZI1, Description = AT0ZI1 protein, PFAM = PF06592)' T '20.1' 'stress.biotic' 'nbv0.3scaffold532_23942-29235' '(at1g32370 : 81.6) Encodes a 122 amino acid basic protein involved in tobamovirus multiplication in planta.; tobamovirus multiplication 2B (TOM2B); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative TOM2B, Description = Tobamovirus multiplication 2B protein isoform 2, PFAM = )' T '20.1' 'stress.biotic' 'nbv0.3scaffold2867_2671-6647' '(at1g64140 : 479.0) BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 3596 Blast hits to 2004 proteins in 150 species: Archae - 0; Bacteria - 54; Metazoa - 1597; Fungi - 38; Plants - 513; Viruses - 9; Other Eukaryotes - 1385 (source: NCBI BLink). & (reliability: 958.0) & (original description: Putative WRKY19, Description = BnaC09g06380D protein, PFAM = )' T '20.1' 'stress.biotic' 'nbv0.3scaffold4045_1-5209' '(gnl|cdd|39857 : 342.0) no description available & (at1g53350 : 269.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|85132 : 245.0) no description available & (reliability: 516.0) & (original description: Putative PGSC0003DMG400007462, Description = NRC2a, PFAM = PF00931)' T '20.1' 'stress.biotic' 'nbv0.3scaffold7003_8237-11297' '(gnl|cdd|84754 : 127.0) no description available & (at1g70890 : 85.1) MLP-like protein 43 (MLP43); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.5); Has 440 Blast hits to 408 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 440; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative orf, Description = Putative PR-10 type pathogenesis-related protein, PFAM = PF00407)' T '20.1' 'stress.biotic' 'nbv0.3scaffold8423_1689-4210' '(p11670|prb1_tobac : 350.0) Basic form of pathogenesis-related protein 1 precursor (PRP 1) - Nicotiana tabacum (Common tobacco) & (at4g33720 : 203.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: basic pathogenesis-related protein 1 (TAIR:AT2G14580.1); Has 3131 Blast hits to 3024 proteins in 381 species: Archae - 0; Bacteria - 70; Metazoa - 1690; Fungi - 339; Plants - 919; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|29108 : 155.0) no description available & (gnl|cdd|38227 : 123.0) no description available & (reliability: 406.0) & (original description: Putative pr1b, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T '20.1' 'stress.biotic' 'nbv0.3scaffold10279_36711-39469' '(at5g36970 : 197.0) NDR1/HIN1-like protein, expression induced during incompatible response to a pathogen, expression is at least partly dependent on the salicylic acid signaling pathway; NDR1/HIN1-like 25 (NHL25); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response, incompatible interaction, salicylic acid mediated signaling pathway; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G65690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70773 : 138.0) no description available & (reliability: 394.0) & (original description: Putative NHL25, Description = NDR1/HIN1-like 25, PFAM = PF03168)' T '20.1' 'stress.biotic' 'nbv0.3scaffold11523_27448-30591' '(at2g15220 : 290.0) Plant basic secretory protein (BSP) family protein; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, basic secretory protein (InterPro:IPR007541); BEST Arabidopsis thaliana protein match is: Plant basic secretory protein (BSP) family protein (TAIR:AT2G15130.1); Has 296 Blast hits to 296 proteins in 84 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi - 66; Plants - 170; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|68039 : 274.0) no description available & (reliability: 580.0) & (original description: Putative Sb01g018500, Description = Putative uncharacterized protein Sb01g018500, PFAM = PF04450)' T '20.1' 'stress.biotic' 'nbv0.3scaffold14027_4519-9856' '(at3g18165 : 285.0) Encodes MOS4 (Modifier of snc1, 4), a nuclear protein homologous to human Breast Cancer-Amplified Sequence (BCAS2). MOS4 interacts with AtCDC5 and PRL1. All three proteins are essential for plant innate immunity.; Modifier of snc1,4 (MOS4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response signaling pathway, resistance gene-independent, defense response signaling pathway, resistance gene-dependent, defense response to bacterium, defense response to fungus; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Breast carcinoma amplified sequence 2 (InterPro:IPR008409); Has 346 Blast hits to 346 proteins in 142 species: Archae - 0; Bacteria - 2; Metazoa - 155; Fungi - 78; Plants - 42; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|69236 : 251.0) no description available & (gnl|cdd|38306 : 207.0) no description available & (reliability: 570.0) & (original description: Putative MOS4, Description = Pre-mRNA-splicing factor SPF27 homolog, PFAM = PF05700)' T '20.1' 'stress.biotic' 'nbv0.3scaffold19848_6539-11814' '(at1g20780 : 155.0) Encodes a protein containing a U-box and an ARM domain.; senescence-associated E3 ubiquitin ligase 1 (SAUL1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of chlorophyll catabolic process, regulation of chlorophyll biosynthetic process, leaf senescence, regulation of abscisic acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G76390.2); Has 2790 Blast hits to 2660 proteins in 201 species: Archae - 0; Bacteria - 20; Metazoa - 434; Fungi - 161; Plants - 1969; Viruses - 3; Other Eukaryotes - 203 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative Sb03g045700, Description = Putative uncharacterized protein Sb03g045700, PFAM = PF05804)' T '20.1' 'stress.biotic' 'nbv0.3scaffold20257_923-32406' '(at4g19040 : 1199.0) Encodes a PH and START domain-containing protein that mediates resistance to pathogenic fungi. Resistance requires salicylic acid signalling. Mutants are resistant to E. cichoracearum. Expressed throughout plant tissues and possibly localized to membranes /mitochondrion.; ENHANCED DISEASE RESISTANCE 2 (EDR2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769), Pleckstrin homology-type (InterPro:IPR011993), Lipid-binding START (InterPro:IPR002913), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein (TAIR:AT5G45560.1). & (gnl|cdd|70520 : 238.0) no description available & (reliability: 2398.0) & (original description: Putative EDR2, Description = Protein ENHANCED DISEASE RESISTANCE 2, PFAM = PF01852;PF07059)' T '20.1' 'stress.biotic' 'nbv0.3scaffold23510_4986-9267' '(gnl|cdd|39857 : 259.0) no description available & (gnl|cdd|85132 : 177.0) no description available & (at1g50180 : 169.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative PGSC0003DMG400004873, Description = NBS-LRR class resistance protein Fy12-Ry1, PFAM = PF00931)' T '20.1' 'stress.biotic' 'nbv0.3scaffold23851_1760-11409' '(at4g19810 : 378.0) Glycosyl hydrolase family protein with chitinase insertion domain; FUNCTIONS IN: cation binding, chitinase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Chitinase II (InterPro:IPR011583), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein with chitinase insertion domain (TAIR:AT4G19820.1); Has 6461 Blast hits to 6286 proteins in 1137 species: Archae - 29; Bacteria - 2687; Metazoa - 1798; Fungi - 1311; Plants - 165; Viruses - 109; Other Eukaryotes - 362 (source: NCBI BLink). & (gnl|cdd|47913 : 251.0) no description available & (gnl|cdd|38017 : 247.0) no description available & (reliability: 756.0) & (original description: Putative CRA1, Description = Putative chitinase-related agglutinin 1 protein, PFAM = PF00704)' T '20.1' 'stress.biotic' 'nbv0.3scaffold24931_10911-19010' '(at5g61240 : 490.0) Leucine-rich repeat (LRR) family protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G13910.1). & (p93194|rpk1_iponi : 118.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 105.0) no description available & (reliability: 980.0) & (original description: Putative BnaC09g05210D, Description = BnaC09g05210D protein, PFAM = PF13855;PF13855)' T '20.1' 'stress.biotic' 'nbv0.3scaffold26152_15727-21325' '(at4g33300 : 816.0) ADR1-like 1 (ADR1-L1); FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Powdery mildew resistance protein, RPW8 domain (InterPro:IPR008808), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: ADR1-like 2 (TAIR:AT5G04720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39857 : 177.0) no description available & (gnl|cdd|85132 : 153.0) no description available & (reliability: 1632.0) & (original description: Putative shz, Description = Putative CC-NBS-LRR protein, PFAM = PF00931;PF05659)' T '20.1' 'stress.biotic' 'nbv0.3scaffold28669_1853-8694' '(gnl|cdd|39857 : 284.0) no description available & (gnl|cdd|85132 : 255.0) no description available & (at3g46530 : 218.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative NBS391R, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T '20.1' 'stress.biotic' 'nbv0.3scaffold30312_6110-10107' '(at1g64140 : 474.0) BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 3596 Blast hits to 2004 proteins in 150 species: Archae - 0; Bacteria - 54; Metazoa - 1597; Fungi - 38; Plants - 513; Viruses - 9; Other Eukaryotes - 1385 (source: NCBI BLink). & (reliability: 948.0) & (original description: Putative WRKY19, Description = BnaC09g06380D protein, PFAM = )' T '20.1' 'stress.biotic' 'nbv0.3scaffold38461_2447-6721' '(at1g20030 : 327.0) Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47535 : 250.0) no description available & (p83332|tlp1_prupe : 238.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 654.0) & (original description: Putative TLP3, Description = Thaumatin-like protein 3, PFAM = PF00314)' T '20.1' 'stress.biotic' 'nbv0.3scaffold58848_4958-9379' '(at4g11220 : 277.0) VIRB2-interacting protein 2 (BTI2); INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 1 (TAIR:AT4G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37003 : 234.0) no description available & (gnl|cdd|66169 : 213.0) no description available & (reliability: 540.0) & (original description: Putative RTNLB5, Description = Reticulon-like protein B5, PFAM = PF02453)' T '20.1' 'stress.biotic' 'nbv0.3scaffold59977_156-5843' '(at1g05850 : 482.0) Encodes an endo chitinase-like protein AtCTL1. Essential for tolerance to heat, salt and drought stresses. Also involved in root hair development, cell expansion and response to cytokinin. Allelic to erh2. 11 alleles described in Hauser (1995). Mutant is defective in acquired thermotolerance, appears semidwarf throughout its life cycle and has extra lateral branches. There are two EMS alleles. Expression of AtHSP101 is not affected in the mutants.; POM-POM1 (POM1); FUNCTIONS IN: chitinase activity; INVOLVED IN: in 9 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 19 (InterPro:IPR016283), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: chitinase-like protein 2 (TAIR:AT3G16920.1); Has 1965 Blast hits to 1960 proteins in 417 species: Archae - 0; Bacteria - 470; Metazoa - 35; Fungi - 5; Plants - 1415; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|29557 : 268.0) no description available & (gnl|cdd|39939 : 250.0) no description available & (q09023|chi2_brana : 187.0) Endochitinase CH25 precursor (EC 3.2.1.14) - Brassica napus (Rape) & (reliability: 964.0) & (original description: Putative CTL1, Description = Chitinase-like protein 1, PFAM = PF00182)' T '20.1' 'stress.biotic' 'nbv0.3scaffold64516_1-3648' '(gnl|cdd|39857 : 202.0) no description available & (gnl|cdd|85132 : 195.0) no description available & (at1g53350 : 161.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative RGA88, Description = NBS-coding resistance protein, PFAM = PF00931)' T '20.1' 'stress.biotic' 'nbv0.3scaffold71385_1285-4233' '(at1g77700 : 324.0) Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: thaumatin-like protein 3 (TAIR:AT1G75030.1); Has 1591 Blast hits to 1571 proteins in 178 species: Archae - 0; Bacteria - 39; Metazoa - 54; Fungi - 86; Plants - 1401; Viruses - 2; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|47535 : 222.0) no description available & (q9fsg7|tp1a_maldo : 168.0) Thaumatin-like protein 1a precursor (Allergen Mal d 2) (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 648.0) & (original description: Putative BFTP, Description = Pathogenesis-related group 5 protein, PFAM = PF00314)' T '20.1' 'stress.biotic' 'nbv0.3scaffold71775_1-5077' '(q9m3t9|dad1_betve : 178.0) Defender against cell death 1 (DAD-1) - Betula verrucosa (White birch) (Betula pendula) & (at2g35520 : 176.0) DEFENDER AGAINST CELL DEATH 2 (DAD2); CONTAINS InterPro DOMAIN/s: Defender against death DAD protein (InterPro:IPR003038); BEST Arabidopsis thaliana protein match is: Defender against death (DAD family) protein (TAIR:AT1G32210.1); Has 458 Blast hits to 458 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 115; Plants - 102; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|36957 : 140.0) no description available & (gnl|cdd|85869 : 136.0) no description available & (reliability: 352.0) & (original description: Putative DAD1, Description = Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1, PFAM = PF02109)' T '20.1' 'stress.biotic' 'nbv0.3scaffold73570_1095-8031' '(at1g20780 : 985.0) Encodes a protein containing a U-box and an ARM domain.; senescence-associated E3 ubiquitin ligase 1 (SAUL1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of chlorophyll catabolic process, regulation of chlorophyll biosynthetic process, leaf senescence, regulation of abscisic acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G76390.2); Has 2790 Blast hits to 2660 proteins in 201 species: Archae - 0; Bacteria - 20; Metazoa - 434; Fungi - 161; Plants - 1969; Viruses - 3; Other Eukaryotes - 203 (source: NCBI BLink). & (reliability: 1970.0) & (original description: Putative PUB43, Description = U-box domain-containing protein 43, PFAM = PF04564)' T '20.1' 'stress.biotic' 'nbv0.3scaffold82183_1-4645' '(gnl|cdd|39857 : 291.0) no description available & (gnl|cdd|85132 : 240.0) no description available & (at1g50180 : 231.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 416.0) & (original description: Putative rx, Description = Rx protein, PFAM = PF00931)' T '20.1' 'stress.biotic' 'nbv0.3scaffold84532_1-4683' '(at5g24620 : 342.0) Pathogenesis-related thaumatin superfamily protein; INVOLVED IN: response to other organism; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT2G17860.1). & (gnl|cdd|47535 : 262.0) no description available & (q9fsg7|tp1a_maldo : 211.0) Thaumatin-like protein 1a precursor (Allergen Mal d 2) (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 684.0) & (original description: Putative PR5, Description = Pathogenesis-related thaumatin family protein, PFAM = PF00314)' T '20.1' 'stress.biotic' 'nbv0.3scaffold84765_1-2913' '(gnl|cdd|39857 : 274.0) no description available & (gnl|cdd|85132 : 230.0) no description available & (at3g07040 : 210.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (reliability: 420.0) & (original description: Putative NBS173-3, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T '20.1' 'stress.biotic' 'nbv0.3scaffold89868_332-2931' '(at3g20600 : 103.0) Required for non-race specific resistance to bacterial and fungal pathogens.Mediates systemic acquired resistance (SAR) response.; non race-specific disease resistance 1 (NDR1); CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT3G20590.1); Has 471 Blast hits to 471 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 471; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative NDR1, Description = NDR1-like protein, PFAM = )' T '20.1' 'stress.biotic' 'nbv0.3scaffold103014_420-3677' '(at2g36800 : 440.0) Encodes a DON-Glucosyltransferase. The UGT73C5 glucosylates both brassinolide and castasterone in the 23-O position. The enzyme is presumably involved in the homeostasis of those steroid hormones hence regulating BR activity. Transgenic plants overexpressing UGT73C5 show a typical BR-deficient phenotype.; don-glucosyltransferase 1 (DOGT1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73C6 (TAIR:AT2G36790.1); Has 7663 Blast hits to 7564 proteins in 401 species: Archae - 0; Bacteria - 196; Metazoa - 2172; Fungi - 32; Plants - 5134; Viruses - 64; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 215.0) no description available & (p56725|zox_phavu : 135.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 90.8) no description available & (reliability: 880.0) & (original description: Putative UGT73C3, Description = UDP-glycosyltransferase 73C3, PFAM = PF00201)' T '20.1' 'stress.biotic' 'nbv0.3scaffold170273_1-749' '(at5g17540 : 138.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase (TAIR:AT3G03480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 120.0) no description available & (reliability: 276.0) & (original description: Putative AAT, Description = Benzyl alcohol O-benzoyltransferase, PFAM = PF02458)' T '20.1' 'stress.biotic' 'nbv0.5scaffold254_615344-625980' '(gnl|cdd|69947 : 462.0) no description available & (at2g02180 : 405.0) Necessary for the efficient multiplication of tobamoviruses.; tobamovirus multiplication protein 3 (TOM3); INVOLVED IN: viral replication complex formation and maintenance; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1084) (TAIR:AT1G14530.2); Has 262 Blast hits to 261 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 810.0) & (original description: Putative TOM3, Description = Tobamovirus multiplication protein 3, PFAM = PF06454)' T '20.1' 'stress.biotic' 'nbv0.5scaffold400_154001-165080' '(at1g20780 : 216.0) Encodes a protein containing a U-box and an ARM domain.; senescence-associated E3 ubiquitin ligase 1 (SAUL1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of chlorophyll catabolic process, regulation of chlorophyll biosynthetic process, leaf senescence, regulation of abscisic acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G76390.2); Has 2790 Blast hits to 2660 proteins in 201 species: Archae - 0; Bacteria - 20; Metazoa - 434; Fungi - 161; Plants - 1969; Viruses - 3; Other Eukaryotes - 203 (source: NCBI BLink). & (gnl|cdd|47808 : 84.9) no description available & (reliability: 432.0) & (original description: Putative glysoja_015640, Description = U-box domain-containing protein 43, PFAM = PF05659;PF04564)' T '20.1' 'stress.biotic' 'nbv0.5scaffold613_301155-304101' '(at1g77700 : 322.0) Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: thaumatin-like protein 3 (TAIR:AT1G75030.1); Has 1591 Blast hits to 1571 proteins in 178 species: Archae - 0; Bacteria - 39; Metazoa - 54; Fungi - 86; Plants - 1401; Viruses - 2; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|47535 : 220.0) no description available & (q9fsg7|tp1a_maldo : 167.0) Thaumatin-like protein 1a precursor (Allergen Mal d 2) (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 644.0) & (original description: Putative BFTP, Description = Thaumatin-like protein, PFAM = PF00314)' T '20.1' 'stress.biotic' 'nbv0.5scaffold1064_274119-278114' '(gnl|cdd|39857 : 232.0) no description available & (gnl|cdd|85132 : 215.0) no description available & (at3g46530 : 179.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative R1, Description = R1, PFAM = PF12061;PF00931)' T '20.1' 'stress.biotic' 'nbv0.5scaffold1313_337009-342854' '(gnl|cdd|39857 : 269.0) no description available & (gnl|cdd|85132 : 247.0) no description available & (at3g46530 : 215.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 430.0) & (original description: Putative NBS391R, Description = NBS-coding resistance gene analog, PFAM = PF13499;PF00931)' T '20.1' 'stress.biotic' 'nbv0.5scaffold1748_40763-75235' '(at4g19040 : 1196.0) Encodes a PH and START domain-containing protein that mediates resistance to pathogenic fungi. Resistance requires salicylic acid signalling. Mutants are resistant to E. cichoracearum. Expressed throughout plant tissues and possibly localized to membranes /mitochondrion.; ENHANCED DISEASE RESISTANCE 2 (EDR2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769), Pleckstrin homology-type (InterPro:IPR011993), Lipid-binding START (InterPro:IPR002913), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein (TAIR:AT5G45560.1). & (gnl|cdd|70520 : 239.0) no description available & (reliability: 2392.0) & (original description: Putative EDR2, Description = Protein ENHANCED DISEASE RESISTANCE 2, PFAM = PF01852;PF07059)' T '20.1' 'stress.biotic' 'nbv0.5scaffold1954_106377-108916' '(at4g31470 : 196.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G57625.1); Has 3047 Blast hits to 2958 proteins in 378 species: Archae - 0; Bacteria - 60; Metazoa - 1662; Fungi - 337; Plants - 890; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (q40374|pr1_medtr : 156.0) Pathogenesis-related protein PR-1 precursor - Medicago truncatula (Barrel medic) & (gnl|cdd|29108 : 132.0) no description available & (gnl|cdd|38227 : 109.0) no description available & (reliability: 392.0) & (original description: Putative pr1, Description = STS14 protein, putative, PFAM = PF00188)' T '20.1' 'stress.biotic' 'nbv0.5scaffold2063_97911-102093' '(at5g61240 : 214.0) Leucine-rich repeat (LRR) family protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G13910.1). & (p93194|rpk1_iponi : 88.6) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 428.0) & (original description: Putative EILP, Description = Leucine-rich repeat (LRR) family protein isoform 1, PFAM = PF13855;PF13855)' T '20.1' 'stress.biotic' 'nbv0.5scaffold3524_82925-86523' '(at5g20480 : 150.0) Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.; EF-TU receptor (EFR); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47090.1); Has 211073 Blast hits to 132033 proteins in 4602 species: Archae - 167; Bacteria - 19808; Metazoa - 69159; Fungi - 9873; Plants - 87247; Viruses - 333; Other Eukaryotes - 24486 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 132.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35665 : 91.6) no description available & (reliability: 276.0) & (original description: Putative PGSC0003DMG400007611, Description = Non-specific serine/threonine protein kinase, PFAM = PF08263;PF13855;PF13855)' T '20.1' 'stress.biotic' 'nbv0.5scaffold3701_21082-26857' '(at4g38660 : 282.0) Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: THAUMATIN-LIKE PROTEIN 1 (TAIR:AT4G24180.1); Has 1636 Blast hits to 1618 proteins in 187 species: Archae - 0; Bacteria - 43; Metazoa - 60; Fungi - 87; Plants - 1419; Viruses - 4; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|47535 : 253.0) no description available & (p83332|tlp1_prupe : 206.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 564.0) & (original description: Putative TLP1, Description = Thaumatin-like protein 1, PFAM = PF00314)' T '20.1' 'stress.biotic' 'nbv0.5scaffold4024_57052-63156' '(gnl|cdd|39857 : 262.0) no description available & (at5g35450 : 208.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 207.0) no description available & (reliability: 402.0) & (original description: Putative RGA88, Description = Putative ovule protein, PFAM = PF00931)' T '20.1' 'stress.biotic' 'nbv0.5scaffold4088_28446-41248' '(gnl|cdd|69947 : 402.0) no description available & (at2g02180 : 325.0) Necessary for the efficient multiplication of tobamoviruses.; tobamovirus multiplication protein 3 (TOM3); INVOLVED IN: viral replication complex formation and maintenance; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1084) (TAIR:AT1G14530.2); Has 262 Blast hits to 261 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 650.0) & (original description: Putative TOM3, Description = Tobamovirus multiplication 3, PFAM = PF06454)' T '20.1' 'stress.biotic' 'nbv0.5scaffold4823_101120-104668' '(at3g54420 : 241.0) encodes an EP3 chitinase that is expressed during somatic embryogenesis in 'nursing' cells surrounding the embryos but not in embryos themselves. The gene is also expressed in mature pollen and growing pollen tubes until they enter the receptive synergid, but not in endosperm and integuments as in carrot. Post-embryonically, expression is found in hydathodes, stipules, root epidermis and emerging root hairs.; homolog of carrot EP3-3 chitinase (EP3); FUNCTIONS IN: chitinase activity; INVOLVED IN: somatic embryogenesis, plant-type hypersensitive response; LOCATED IN: cell wall; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT2G43590.1); Has 2660 Blast hits to 2432 proteins in 504 species: Archae - 0; Bacteria - 547; Metazoa - 34; Fungi - 178; Plants - 1776; Viruses - 22; Other Eukaryotes - 103 (source: NCBI BLink). & (p27054|chi4_phavu : 231.0) Endochitinase PR4 precursor (EC 3.2.1.14) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|29557 : 192.0) no description available & (gnl|cdd|39939 : 147.0) no description available & (reliability: 482.0) & (original description: Putative chiB, Description = Class IV chitinase, PFAM = PF00182;PF00182;PF00187)' T '20.1' 'stress.biotic' 'nbv0.5scaffold5979_23358-27840' '(at4g36010 : 304.0) Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT2G17860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47535 : 243.0) no description available & (p83332|tlp1_prupe : 230.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 608.0) & (original description: Putative BnaC03g76850D, Description = BnaC03g76850D protein, PFAM = PF00314)' T '20.1' 'stress.biotic' 'nbv0.5scaffold7153_70334-73440' '(gnl|cdd|47913 : 267.0) no description available & (gnl|cdd|38017 : 234.0) no description available & (at4g19810 : 222.0) Glycosyl hydrolase family protein with chitinase insertion domain; FUNCTIONS IN: cation binding, chitinase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Chitinase II (InterPro:IPR011583), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein with chitinase insertion domain (TAIR:AT4G19820.1); Has 6461 Blast hits to 6286 proteins in 1137 species: Archae - 29; Bacteria - 2687; Metazoa - 1798; Fungi - 1311; Plants - 165; Viruses - 109; Other Eukaryotes - 362 (source: NCBI BLink). & (reliability: 444.0) & (original description: Putative chit5, Description = Putative class 5 chitinase, PFAM = PF00704)' T '20.1' 'stress.biotic' 'nbv0.5scaffold7331_5906-23942' '(at5g35450 : 193.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39857 : 147.0) no description available & (gnl|cdd|85132 : 90.7) no description available & (reliability: 380.0) & (original description: Putative PGSC0003DMG400013407, Description = , PFAM = PF00931;PF00931)' T '20.1' 'stress.biotic' 'nbv0.5scaffold9200_1600-14766' '(gnl|cdd|39857 : 303.0) no description available & (gnl|cdd|85132 : 235.0) no description available & (at3g46530 : 198.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative help3, Description = Hero resistance protein 3 homologue, PFAM = PF00931;PF01419;PF01419;PF01419)' T '20.1' 'stress.biotic' 'niben044scf00000307ctg000_3233-5784' '(p07053|pr1b_tobac : 322.0) Pathogenesis-related protein 1B precursor (PR-1B) - Nicotiana tabacum (Common tobacco) & (at2g14580 : 192.0) pathogenesis related protein, encodes a basic PR1-like protein. Expresses in flowers, roots, and not in leaves and responses to ethylene and methyl jasmonate. Salicylic acid represses gene expression.; basic pathogenesis-related protein 1 (PRB1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to ethylene stimulus, response to jasmonic acid stimulus, response to salicylic acid stimulus; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: shoot, shoot apex, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: pathogenesis-related gene 1 (TAIR:AT2G14610.1); Has 3181 Blast hits to 3075 proteins in 384 species: Archae - 0; Bacteria - 66; Metazoa - 1736; Fungi - 341; Plants - 911; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|29108 : 160.0) no description available & (gnl|cdd|38227 : 127.0) no description available & (reliability: 382.0) & (original description: Putative pr1, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T '20.1' 'stress.biotic' 'niben044scf00001929ctg023_1-3524' '(at1g64140 : 482.0) BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 3596 Blast hits to 2004 proteins in 150 species: Archae - 0; Bacteria - 54; Metazoa - 1597; Fungi - 38; Plants - 513; Viruses - 9; Other Eukaryotes - 1385 (source: NCBI BLink). & (reliability: 964.0) & (original description: Putative WRKY19, Description = BnaC09g06380D protein, PFAM = )' T '20.1' 'stress.biotic' 'niben044scf00002773ctg004_3764-6591' '(p14232|tga1a_tobac : 408.0) TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a) (ASF-1 protein) - Nicotiana tabacum (Common tobacco) & (at5g65210 : 313.0) Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.; TGA1; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 4 (TAIR:AT5G10030.2); Has 674 Blast hits to 672 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 649; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 626.0) & (original description: Putative bZIP83, Description = Transcription factor bZIP83, PFAM = PF14144)' T '20.1' 'stress.biotic' 'niben044scf00002905ctg007_11371-16001' '(gnl|cdd|39857 : 271.0) no description available & (gnl|cdd|85132 : 262.0) no description available & (at3g46730 : 204.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46530.1); Has 14658 Blast hits to 14197 proteins in 483 species: Archae - 6; Bacteria - 489; Metazoa - 440; Fungi - 102; Plants - 13534; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative Sw-5, Description = Tomato spotted wilt virus resistance protein, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben044scf00004222ctg031_795-5530' '(gnl|cdd|84754 : 129.0) no description available & (at1g70830 : 102.0) MLP-like protein 28 (MLP28); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 34 (TAIR:AT1G70850.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative orf, Description = Orf protein, PFAM = PF00407)' T '20.1' 'stress.biotic' 'niben044scf00004779ctg012_1080-5327' '(at5g17540 : 350.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase (TAIR:AT3G03480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 310.0) no description available & (o24645|hcbt1_diaca : 143.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 700.0) & (original description: Putative AMAT, Description = Methanol O-anthraniloyltransferase, PFAM = PF02458)' T '20.1' 'stress.biotic' 'niben044scf00004802ctg003_1-3129' '(gnl|cdd|39857 : 185.0) no description available & (gnl|cdd|85132 : 178.0) no description available & (at3g07040 : 166.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative PGSC0003DMG400025259, Description = NBS resistance protein RGA49, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben044scf00005464ctg007_6316-10179' '(gnl|cdd|39857 : 270.0) no description available & (gnl|cdd|85132 : 260.0) no description available & (at1g50180 : 207.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative BS2, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben044scf00006004ctg000_6517-9292' '(gnl|cdd|85132 : 158.0) no description available & (gnl|cdd|39857 : 142.0) no description available & (at3g46530 : 115.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative Pvr9, Description = Putative ovule protein, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben044scf00006274ctg015_1-4294' '(gnl|cdd|39857 : 287.0) no description available & (gnl|cdd|85132 : 235.0) no description available & (at1g59218 : 208.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58848.2). & (reliability: 416.0) & (original description: Putative NBS173-3, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben044scf00007762ctg031_2916-5432' '(at1g05760 : 80.9) Specifically restrict the long-distance movement of tobacco etch potyvirus (TEV) without involving either hypersensitive cell death or systemic acquired resistance; restricted tev movement 1 (RTM1); FUNCTIONS IN: sugar binding; INVOLVED IN: response to virus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT1G05770.1); Has 829 Blast hits to 525 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 828; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative , Description = , PFAM = PF01419)' T '20.1' 'stress.biotic' 'niben044scf00008754ctg000_8453-13136' '(at3g07040 : 334.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (gnl|cdd|39857 : 298.0) no description available & (gnl|cdd|85132 : 200.0) no description available & (reliability: 668.0) & (original description: Putative PGSC0003DMG400044423, Description = NBS resistance protein RGA49, PFAM = PF13855;PF00931)' T '20.1' 'stress.biotic' 'niben044scf00009480ctg006_4598-6863' '(at5g36970 : 208.0) NDR1/HIN1-like protein, expression induced during incompatible response to a pathogen, expression is at least partly dependent on the salicylic acid signaling pathway; NDR1/HIN1-like 25 (NHL25); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response, incompatible interaction, salicylic acid mediated signaling pathway; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G65690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70773 : 117.0) no description available & (reliability: 416.0) & (original description: Putative NHL25, Description = NDR1/HIN1-like 25, PFAM = PF03168)' T '20.1' 'stress.biotic' 'niben044scf00011370ctg000_9704-13803' '(at5g15870 : 752.0) glycosyl hydrolase family 81 protein; FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, endo-1,3(4)-beta-glucanase activity; INVOLVED IN: response to cyclopentenone; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 81 (InterPro:IPR005200); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 81 protein (TAIR:AT1G18310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67267 : 545.0) no description available & (gnl|cdd|37465 : 504.0) no description available & (reliability: 1504.0) & (original description: Putative glu2, Description = Beta-1,3-glucanase 2, PFAM = PF03639)' T '20.1' 'stress.biotic' 'niben044scf00013685ctg003_1300-4525' '(at3g09590 : 109.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G02730.1); Has 3024 Blast hits to 2931 proteins in 377 species: Archae - 0; Bacteria - 64; Metazoa - 1633; Fungi - 327; Plants - 888; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (p09042|pr1c_tobac : 92.0) Pathogenesis-related protein 1C precursor (PR-1C) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47528 : 85.8) no description available & (gnl|cdd|38227 : 85.7) no description available & (reliability: 218.0) & (original description: Putative At3g09590, Description = BnaC03g35900D protein, PFAM = PF00188)' T '20.1' 'stress.biotic' 'niben044scf00014217ctg010_826-9050' '(at5g64930 : 313.0) Regulator of expression of pathogenesis-related (PR) genes. Participates in signal transduction pathways involved in plant defense (systemic acquired resistance -SAR).; CONSTITUTIVE EXPRESSION OF PR GENES 5 (CPR5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 626.0) & (original description: Putative CPR5, Description = CPR5, PFAM = )' T '20.1' 'stress.biotic' 'niben044scf00015460ctg002_804-5797' '(at1g75800 : 339.0) Pathogenesis-related thaumatin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G20030.2); Has 1631 Blast hits to 1621 proteins in 190 species: Archae - 2; Bacteria - 41; Metazoa - 64; Fungi - 79; Plants - 1416; Viruses - 4; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|47535 : 253.0) no description available & (p83332|tlp1_prupe : 244.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 678.0) & (original description: Putative TLP3, Description = Thaumatin-like protein 3, PFAM = PF00314)' T '20.1' 'stress.biotic' 'niben044scf00015551ctg010_5121-10099' '(at3g48090 : 426.0) Component of R gene-mediated disease resistance in Arabidopsis thaliana with homology to eukaryotic lipases.; enhanced disease susceptibility 1 (EDS1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 850.0) & (original description: Putative EDS1B, Description = Protein EDS1B, PFAM = PF01764)' T '20.1' 'stress.biotic' 'niben044scf00016992ctg005_172-4778' '(gnl|cdd|39857 : 143.0) no description available & (at1g50180 : 132.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|85132 : 99.0) no description available & (reliability: 238.0) & (original description: Putative CN, Description = Putative ovule protein, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben044scf00017953ctg005_6521-10078' '(at3g54420 : 322.0) encodes an EP3 chitinase that is expressed during somatic embryogenesis in 'nursing' cells surrounding the embryos but not in embryos themselves. The gene is also expressed in mature pollen and growing pollen tubes until they enter the receptive synergid, but not in endosperm and integuments as in carrot. Post-embryonically, expression is found in hydathodes, stipules, root epidermis and emerging root hairs.; homolog of carrot EP3-3 chitinase (EP3); FUNCTIONS IN: chitinase activity; INVOLVED IN: somatic embryogenesis, plant-type hypersensitive response; LOCATED IN: cell wall; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT2G43590.1); Has 2660 Blast hits to 2432 proteins in 504 species: Archae - 0; Bacteria - 547; Metazoa - 34; Fungi - 178; Plants - 1776; Viruses - 22; Other Eukaryotes - 103 (source: NCBI BLink). & (p27054|chi4_phavu : 308.0) Endochitinase PR4 precursor (EC 3.2.1.14) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|29557 : 265.0) no description available & (gnl|cdd|39939 : 223.0) no description available & (reliability: 644.0) & (original description: Putative Cht4, Description = Chitinase 4, PFAM = PF00182;PF00187)' T '20.1' 'stress.biotic' 'niben044scf00018239ctg001_2702-10661' '(gnl|cdd|39857 : 281.0) no description available & (gnl|cdd|85132 : 242.0) no description available & (at1g50180 : 200.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative help3, Description = Hero resistance protein 3 homologue, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben044scf00018802ctg003_4920-10401' '(at1g47890 : 388.0) receptor like protein 7 (RLP7); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 6 (TAIR:AT1G45616.1); Has 144165 Blast hits to 35486 proteins in 1317 species: Archae - 51; Bacteria - 13451; Metazoa - 35189; Fungi - 1938; Plants - 82186; Viruses - 41; Other Eukaryotes - 11309 (source: NCBI BLink). & (p93194|rpk1_iponi : 187.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 112.0) no description available & (reliability: 704.0) & (original description: Putative vdr3, Description = Leucine-rich-repeat receptor-like protein, PFAM = PF13855;PF13855;PF08263;PF00560)' T '20.1' 'stress.biotic' 'niben044scf00019156ctg002_343-2100' '(at2g15080 : 95.5) receptor like protein 19 (RLP19); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 53 (TAIR:AT5G27060.1); Has 148753 Blast hits to 34404 proteins in 1310 species: Archae - 57; Bacteria - 11889; Metazoa - 32225; Fungi - 1644; Plants - 90370; Viruses - 42; Other Eukaryotes - 12526 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative vdr3, Description = Receptor-like protein 12, PFAM = PF13516;PF08263)' T '20.1' 'stress.biotic' 'niben044scf00019248ctg004_1-873' '(gnl|cdd|85132 : 179.0) no description available & (gnl|cdd|39857 : 145.0) no description available & (at1g50180 : 133.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative PGSC0003DMG400020740, Description = NBS-coding resistance protein-like protein RGA11, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben044scf00021945ctg000_6901-10480' '(at4g38660 : 308.0) Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: THAUMATIN-LIKE PROTEIN 1 (TAIR:AT4G24180.1); Has 1636 Blast hits to 1618 proteins in 187 species: Archae - 0; Bacteria - 43; Metazoa - 60; Fungi - 87; Plants - 1419; Viruses - 4; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|47535 : 259.0) no description available & (p83332|tlp1_prupe : 235.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 616.0) & (original description: Putative PR5, Description = Pathogenesis-related protein 5, PFAM = PF00314)' T '20.1' 'stress.biotic' 'niben044scf00023299ctg001_10924-15008' '(gnl|cdd|39857 : 145.0) no description available & (at3g46730 : 103.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46530.1); Has 14658 Blast hits to 14197 proteins in 483 species: Archae - 6; Bacteria - 489; Metazoa - 440; Fungi - 102; Plants - 13534; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|85132 : 86.9) no description available & (reliability: 200.0) & (original description: Putative , Description = , PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben044scf00024166ctg001_1-3243' '(p24091|chi2_tobac : 563.0) Endochitinase B precursor (EC 3.2.1.14) (CHN-B) - Nicotiana tabacum (Common tobacco) & (at3g12500 : 431.0) encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses.; basic chitinase (HCHIB); FUNCTIONS IN: chitinase activity; INVOLVED IN: response to cadmium ion, defense response to fungus, jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT4G01700.1); Has 2944 Blast hits to 2653 proteins in 549 species: Archae - 0; Bacteria - 615; Metazoa - 38; Fungi - 228; Plants - 1922; Viruses - 10; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|84590 : 408.0) no description available & (gnl|cdd|39939 : 271.0) no description available & (reliability: 862.0) & (original description: Putative CHN50, Description = Endochitinase B, PFAM = PF00182;PF00187)' T '20.1' 'stress.biotic' 'niben044scf00024406ctg001_14887-19582' '(gnl|cdd|39857 : 276.0) no description available & (gnl|cdd|85132 : 253.0) no description available & (at3g50950 : 208.0) HOPZ-ACTIVATED RESISTANCE 1 (ZAR1); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 15477 Blast hits to 13963 proteins in 472 species: Archae - 2; Bacteria - 362; Metazoa - 212; Fungi - 129; Plants - 14652; Viruses - 8; Other Eukaryotes - 112 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative NBS391R, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben044scf00024857ctg001_1137-6480' '(gnl|cdd|39857 : 417.0) no description available & (at3g46530 : 412.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|85132 : 253.0) no description available & (reliability: 824.0) & (original description: Putative RPP13, Description = Disease resistance protein RPP13 variant, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben044scf00026128ctg004_1139-6034' '(gnl|cdd|39857 : 271.0) no description available & (gnl|cdd|85132 : 242.0) no description available & (at3g46530 : 215.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 430.0) & (original description: Putative SW5F, Description = Putative ovule protein, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben044scf00026706ctg004_1404-7473' '(gnl|cdd|39857 : 344.0) no description available & (at5g35450 : 269.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 243.0) no description available & (reliability: 516.0) & (original description: Putative PGSC0003DMG400007462, Description = NRC2a, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben044scf00027774ctg007_1-5689' '(at5g49290 : 265.0) receptor like protein 56 (RLP56); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 14 (TAIR:AT1G74180.1); Has 112100 Blast hits to 30260 proteins in 1125 species: Archae - 53; Bacteria - 8278; Metazoa - 26127; Fungi - 1038; Plants - 68577; Viruses - 23; Other Eukaryotes - 8004 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 147.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35665 : 122.0) no description available & (reliability: 530.0) & (original description: Putative PGSC0003DMG402009338, Description = Putative ovule protein, PFAM = PF08263;PF00560;PF13855;PF13855;PF13855;PF13855)' T '20.1' 'stress.biotic' 'niben044scf00028827ctg001_10315-15546' '(gnl|cdd|39857 : 288.0) no description available & (gnl|cdd|85132 : 250.0) no description available & (at3g46530 : 230.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative PGSC0003DMG400005170, Description = Putative ovule protein, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben044scf00031330ctg002_1-5674' '(at2g35520 : 157.0) DEFENDER AGAINST CELL DEATH 2 (DAD2); CONTAINS InterPro DOMAIN/s: Defender against death DAD protein (InterPro:IPR003038); BEST Arabidopsis thaliana protein match is: Defender against death (DAD family) protein (TAIR:AT1G32210.1); Has 458 Blast hits to 458 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 115; Plants - 102; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (q9m3t9|dad1_betve : 157.0) Defender against cell death 1 (DAD-1) - Betula verrucosa (White birch) (Betula pendula) & (gnl|cdd|36957 : 124.0) no description available & (gnl|cdd|85869 : 119.0) no description available & (reliability: 314.0) & (original description: Putative DAD1, Description = Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1, PFAM = PF02109)' T '20.1' 'stress.biotic' 'niben044scf00031792ctg000_1-2723' '(at2g25470 : 207.0) receptor like protein 21 (RLP21); INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: hypocotyl; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 14 (TAIR:AT1G74180.1); Has 123339 Blast hits to 32686 proteins in 1192 species: Archae - 50; Bacteria - 9219; Metazoa - 30627; Fungi - 1506; Plants - 72809; Viruses - 37; Other Eukaryotes - 9091 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 174.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35665 : 98.6) no description available & (reliability: 414.0) & (original description: Putative PGSC0003DMG400023396, Description = Leucine-rich repeat receptor protein kinase EXS, putative, PFAM = PF13855;PF13855;PF13855)' T '20.1' 'stress.biotic' 'niben044scf00032590ctg000_713-2472' '(at1g74190 : 112.0) receptor like protein 15 (RLP15); INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 13 (TAIR:AT1G74170.1); Has 128946 Blast hits to 31204 proteins in 1189 species: Archae - 49; Bacteria - 10411; Metazoa - 29723; Fungi - 1446; Plants - 77583; Viruses - 38; Other Eukaryotes - 9696 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 89.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 206.0) & (original description: Putative Eix1, Description = Receptor-like protein, PFAM = PF13516;PF12799;PF00560)' T '20.1' 'stress.biotic' 'niben044scf00033257ctg001_1-7071' '(gnl|cdd|69947 : 400.0) no description available & (at2g02180 : 322.0) Necessary for the efficient multiplication of tobamoviruses.; tobamovirus multiplication protein 3 (TOM3); INVOLVED IN: viral replication complex formation and maintenance; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1084) (TAIR:AT1G14530.2); Has 262 Blast hits to 261 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 644.0) & (original description: Putative TOM3, Description = Tobamovirus multiplication protein 3, PFAM = PF06454)' T '20.1' 'stress.biotic' 'niben044scf00033398ctg006_19612-27054' '(at2g21340 : 508.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G39030.1); Has 7873 Blast hits to 7863 proteins in 1757 species: Archae - 156; Bacteria - 6520; Metazoa - 33; Fungi - 48; Plants - 395; Viruses - 0; Other Eukaryotes - 721 (source: NCBI BLink). & (gnl|cdd|30880 : 116.0) no description available & (gnl|cdd|36561 : 81.2) no description available & (reliability: 1016.0) & (original description: Putative EDS5, Description = Enhanced disease susceptibility 5, PFAM = PF01554)' T '20.1' 'stress.biotic' 'niben044scf00036576ctg001_6952-10694' '(at5g49290 : 95.1) receptor like protein 56 (RLP56); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 14 (TAIR:AT1G74180.1); Has 112100 Blast hits to 30260 proteins in 1125 species: Archae - 53; Bacteria - 8278; Metazoa - 26127; Fungi - 1038; Plants - 68577; Viruses - 23; Other Eukaryotes - 8004 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative PGSC0003DMG400015687, Description = , PFAM = PF08263;PF13855)' T '20.1' 'stress.biotic' 'niben044scf00040944ctg007_2406-7951' '(at5g35450 : 192.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39857 : 147.0) no description available & (gnl|cdd|85132 : 90.7) no description available & (reliability: 376.0) & (original description: Putative PGSC0003DMG400013407, Description = , PFAM = PF00931;PF00931)' T '20.1' 'stress.biotic' 'niben044scf00045592ctg002_1-3970' '(gnl|cdd|39857 : 386.0) no description available & (at1g50180 : 377.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|85132 : 260.0) no description available & (reliability: 734.0) & (original description: Putative PGSC0003DMG400008306, Description = NBS resistance protein RGA50, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben044scf00045986ctg003_5-2099' '(at5g49290 : 117.0) receptor like protein 56 (RLP56); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 14 (TAIR:AT1G74180.1); Has 112100 Blast hits to 30260 proteins in 1125 species: Archae - 53; Bacteria - 8278; Metazoa - 26127; Fungi - 1038; Plants - 68577; Viruses - 23; Other Eukaryotes - 8004 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative PGSC0003DMG400005590, Description = Receptor like protein 15, putative, PFAM = )' T '20.1' 'stress.biotic' 'niben044scf00055943ctg000_6924-19318' '(at4g17910 : 356.0) transferases, transferring acyl groups; FUNCTIONS IN: transferase activity, transferring acyl groups; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: GWT1 (InterPro:IPR009447); Has 62 Blast hits to 62 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 21; Plants - 15; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|35632 : 191.0) no description available & (gnl|cdd|34666 : 188.0) no description available & (reliability: 712.0) & (original description: Putative At4g17910, Description = Uncharacterized protein At4g17910, PFAM = PF06423)' T '20.1' 'stress.biotic' 'niben044scf00056804ctg004_4530-7293' '(at1g78780 : 185.0) pathogenesis-related family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 197 Blast hits to 196 proteins in 67 species: Archae - 0; Bacteria - 51; Metazoa - 15; Fungi - 36; Plants - 93; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (p16273|prpx_horvu : 181.0) Pathogen-related protein - Hordeum vulgare (Barley) & (reliability: 370.0) & (original description: Putative , Description = Pathogen-related protein, PFAM = )' T '20.1' 'stress.biotic' 'niben044scf00058490ctg000_49-5654' '(at1g02120 : 145.0) Encodes VAD1 (Vascular Associated Death1), a regulator of cell death and defense responses in vascular tissues. VAD1 is a putative membrane associated protein and contains a GRAM domain. vad1 is a lesion mimic mutant that exhibits light conditional appearance of propagative HR (hypersensitive response)-like lesions along the vascular system.; VASCULAR ASSOCIATED DEATH1 (VAD1); INVOLVED IN: defense response to bacterium, negative regulation of programmed cell death; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: C2 domain-containing protein / GRAM domain-containing protein (TAIR:AT3G59660.1); Has 1155 Blast hits to 1034 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 619; Fungi - 222; Plants - 157; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative VAD1, Description = GRAM domain-containing protein 1A, PFAM = PF16016)' T '20.1' 'stress.biotic' 'niben044scf00060616ctg000_7818-10878' '(p16273|prpx_horvu : 176.0) Pathogen-related protein - Hordeum vulgare (Barley) & (at1g78780 : 156.0) pathogenesis-related family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 197 Blast hits to 196 proteins in 67 species: Archae - 0; Bacteria - 51; Metazoa - 15; Fungi - 36; Plants - 93; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative , Description = Pathogen-related protein, PFAM = )' T '20.1' 'stress.biotic' 'niben101ctg08688_1-882' '(gnl|cdd|84754 : 105.0) no description available & (at1g70840 : 89.7) MLP-like protein 31 (MLP31); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.3); Has 485 Blast hits to 453 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 485; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative NtSN1b, Description = Putative PR-10 type pathogenesis-related protein, PFAM = PF00407)' T '20.1' 'stress.biotic' 'niben101scf00087_695689-698228' '(at4g31470 : 194.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G57625.1); Has 3047 Blast hits to 2958 proteins in 378 species: Archae - 0; Bacteria - 60; Metazoa - 1662; Fungi - 337; Plants - 890; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (q40374|pr1_medtr : 155.0) Pathogenesis-related protein PR-1 precursor - Medicago truncatula (Barrel medic) & (gnl|cdd|29108 : 129.0) no description available & (gnl|cdd|38227 : 106.0) no description available & (reliability: 388.0) & (original description: Putative pr1, Description = STS14 protein, putative, PFAM = PF00188)' T '20.1' 'stress.biotic' 'niben101scf00152_2194774-2279546' '(at1g78780 : 282.0) pathogenesis-related family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 197 Blast hits to 196 proteins in 67 species: Archae - 0; Bacteria - 51; Metazoa - 15; Fungi - 36; Plants - 93; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (p16273|prpx_horvu : 186.0) Pathogen-related protein - Hordeum vulgare (Barley) & (reliability: 564.0) & (original description: Putative , Description = Pathogen-related protein, PFAM = )' T '20.1' 'stress.biotic' 'niben101scf00165_77074-79709' '(at3g44220 : 253.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT5G22200.1); Has 838 Blast hits to 838 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 838; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 153.0) no description available & (reliability: 506.0) & (original description: Putative NHL12, Description = NDR1/HIN1-like protein 12, PFAM = PF03168)' T '20.1' 'stress.biotic' 'niben101scf00168_377573-379315' '(at3g56100 : 91.7) Protein kinase expressed in meristematic cells. Phosphorylates AGL24.; meristematic receptor-like kinase (MRLK); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: inflorescence meristem receptor-like kinase 2 (TAIR:AT3G51740.1); Has 154347 Blast hits to 110289 proteins in 3296 species: Archae - 124; Bacteria - 13554; Metazoa - 45622; Fungi - 8090; Plants - 69121; Viruses - 344; Other Eukaryotes - 17492 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative PGSC0003DMG400005590, Description = Receptor like protein 15, putative, PFAM = PF00560;PF00560)' T '20.1' 'stress.biotic' 'niben101scf00168_379316-381272' '(at1g74170 : 115.0) receptor like protein 13 (RLP13); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 15 (TAIR:AT1G74190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 84.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 226.0) & (original description: Putative At1g74170, Description = Leucine-rich repeat-containing protein, PFAM = PF00560)' T '20.1' 'stress.biotic' 'niben101scf00228_1248945-1260437' '(gnl|cdd|84754 : 160.0) no description available & (at1g70840 : 124.0) MLP-like protein 31 (MLP31); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.3); Has 485 Blast hits to 453 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 485; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative MLP, Description = MLP-like protein 28, PFAM = PF00407)' T '20.1' 'stress.biotic' 'niben101scf00262_247168-251564' '(at4g11220 : 231.0) VIRB2-interacting protein 2 (BTI2); INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 1 (TAIR:AT4G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37003 : 184.0) no description available & (gnl|cdd|66169 : 183.0) no description available & (reliability: 452.0) & (original description: Putative uaz7c01g04, Description = Reticulon-like protein, PFAM = PF02453)' T '20.1' 'stress.biotic' 'niben101scf00270_179587-186177' '(at1g05850 : 475.0) Encodes an endo chitinase-like protein AtCTL1. Essential for tolerance to heat, salt and drought stresses. Also involved in root hair development, cell expansion and response to cytokinin. Allelic to erh2. 11 alleles described in Hauser (1995). Mutant is defective in acquired thermotolerance, appears semidwarf throughout its life cycle and has extra lateral branches. There are two EMS alleles. Expression of AtHSP101 is not affected in the mutants.; POM-POM1 (POM1); FUNCTIONS IN: chitinase activity; INVOLVED IN: in 9 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 19 (InterPro:IPR016283), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: chitinase-like protein 2 (TAIR:AT3G16920.1); Has 1965 Blast hits to 1960 proteins in 417 species: Archae - 0; Bacteria - 470; Metazoa - 35; Fungi - 5; Plants - 1415; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|29557 : 266.0) no description available & (gnl|cdd|39939 : 249.0) no description available & (q09023|chi2_brana : 182.0) Endochitinase CH25 precursor (EC 3.2.1.14) - Brassica napus (Rape) & (reliability: 950.0) & (original description: Putative CTL1, Description = Chitinase-like protein 1, PFAM = PF00182)' T '20.1' 'stress.biotic' 'niben101scf00313_748013-752182' '(at5g17540 : 498.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase (TAIR:AT3G03480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 467.0) no description available & (o24645|hcbt1_diaca : 155.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 996.0) & (original description: Putative HSR201, Description = Benzyl alcohol O-benzoyltransferase, PFAM = PF02458)' T '20.1' 'stress.biotic' 'niben101scf00319_84542-101566' '(at5g64930 : 337.0) Regulator of expression of pathogenesis-related (PR) genes. Participates in signal transduction pathways involved in plant defense (systemic acquired resistance -SAR).; CONSTITUTIVE EXPRESSION OF PR GENES 5 (CPR5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 674.0) & (original description: Putative CPR5, Description = CPR5, PFAM = )' T '20.1' 'stress.biotic' 'niben101scf00338_1119953-1122729' '(at1g54540 : 193.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G65690.1); Has 914 Blast hits to 913 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 914; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 119.0) no description available & (reliability: 356.0) & (original description: Putative NHL25, Description = Late embryogenesis abundant hydroxyproline-rich glycoprotein, PFAM = PF03168)' T '20.1' 'stress.biotic' 'niben101scf00478_642697-649036' '(at2g24390 : 177.0) AIG2-like (avirulence induced gene) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Butirosin biosynthesis, BtrG-like (InterPro:IPR013024), AIG2-like (InterPro:IPR009288); BEST Arabidopsis thaliana protein match is: AIG2-like (avirulence induced gene) family protein (TAIR:AT4G31310.1). & (reliability: 354.0) & (original description: Putative At5g39720, Description = AIG2-like protein, PFAM = PF06094)' T '20.1' 'stress.biotic' 'niben101scf00528_151185-154976' '(gnl|cdd|47535 : 256.0) no description available & (at1g18250 : 225.0) encodes a thaumatin-like protein; ATLP-1; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G73620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p83332|tlp1_prupe : 208.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 450.0) & (original description: Putative At1g18250, Description = Thaumatin-like protein, PFAM = PF00314)' T '20.1' 'stress.biotic' 'niben101scf00542_592531-597473' '(gnl|cdd|39857 : 246.0) no description available & (at3g07040 : 230.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (gnl|cdd|85132 : 177.0) no description available & (reliability: 460.0) & (original description: Putative PGSC0003DMG400013308, Description = , PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf00560_516677-523047' '(p56725|zox_phavu : 398.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36780 : 160.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 157.0) no description available & (gnl|cdd|79510 : 81.9) no description available & (reliability: 306.0) & (original description: Putative PGSC0003DMG400032511, Description = Glycosyltransferase, PFAM = PF00201)' T '20.1' 'stress.biotic' 'niben101scf00574_451130-461498' '(at5g61240 : 494.0) Leucine-rich repeat (LRR) family protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G13910.1). & (p93194|rpk1_iponi : 117.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 107.0) no description available & (reliability: 988.0) & (original description: Putative BnaC09g05210D, Description = BnaC09g05210D protein, PFAM = PF13855;PF13855)' T '20.1' 'stress.biotic' 'niben101scf00650_231412-238911' '(gnl|cdd|85132 : 311.0) no description available & (gnl|cdd|39857 : 290.0) no description available & (at1g59780 : 214.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root, flower, synergid; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58400.1); Has 16454 Blast hits to 15209 proteins in 528 species: Archae - 16; Bacteria - 828; Metazoa - 1085; Fungi - 125; Plants - 14178; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative Prf, Description = PRF, PFAM = PF00931;PF12061;PF12061)' T '20.1' 'stress.biotic' 'niben101scf00669_13794-17254' '(at2g36750 : 585.0) UDP-glucosyl transferase 73C1 (UGT73C1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: don-glucosyltransferase 1 (TAIR:AT2G36800.1); Has 7705 Blast hits to 7611 proteins in 415 species: Archae - 0; Bacteria - 205; Metazoa - 2197; Fungi - 31; Plants - 5129; Viruses - 79; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|36406 : 251.0) no description available & (p56725|zox_phavu : 192.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 83.8) no description available & (reliability: 1164.0) & (original description: Putative UGT73C1, Description = UDP-glycosyltransferase 73C1, PFAM = PF00201)' T '20.1' 'stress.biotic' 'niben101scf00712_794399-799377' '(at1g20780 : 975.0) Encodes a protein containing a U-box and an ARM domain.; senescence-associated E3 ubiquitin ligase 1 (SAUL1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of chlorophyll catabolic process, regulation of chlorophyll biosynthetic process, leaf senescence, regulation of abscisic acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G76390.2); Has 2790 Blast hits to 2660 proteins in 201 species: Archae - 0; Bacteria - 20; Metazoa - 434; Fungi - 161; Plants - 1969; Viruses - 3; Other Eukaryotes - 203 (source: NCBI BLink). & (reliability: 1950.0) & (original description: Putative PUB43, Description = U-box domain-containing protein 43, PFAM = PF04564)' T '20.1' 'stress.biotic' 'niben101scf00761_645774-655160' '(gnl|cdd|39857 : 306.0) no description available & (at1g53350 : 243.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|85132 : 235.0) no description available & (reliability: 468.0) & (original description: Putative PGSC0003DMG400013486, Description = Disease resistance protein, putative, PFAM = PF00931;PF12061;PF12061)' T '20.1' 'stress.biotic' 'niben101scf00781_697373-701439' '(gnl|cdd|39857 : 301.0) no description available & (gnl|cdd|85132 : 262.0) no description available & (at1g50180 : 224.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative rx, Description = Disease resistance protein RGH5, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf00831_135340-138683' '(gnl|cdd|70680 : 272.0) no description available & (at5g43860 : 231.0) Encodes a chlorophyllase, the first enzyme in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to chlorophyllide and phytol. AtCLH2 has a typical signal sequence for the chloroplast. Gene expression does not respond to methyljasmonate, a known promoter of senescence and chlorophyll degradation.; chlorophyllase 2 (CLH2); CONTAINS InterPro DOMAIN/s: Chlorophyllase-like (InterPro:IPR010821), Chlorophyllase, chloroplast (InterPro:IPR017395); BEST Arabidopsis thaliana protein match is: chlorophyllase 1 (TAIR:AT1G19670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9mv14|clh1_citsi : 189.0) Chlorophyllase-1, chloroplast precursor (EC 3.1.1.14) (Chlorophyll-chlorophyllido hydrolase 1) (Chlase 1) - Citrus sinensis (Sweet orange) & (reliability: 438.0) & (original description: Putative CLH1, Description = Chlorophyllase, PFAM = PF12740)' T '20.1' 'stress.biotic' 'niben101scf00883_1597166-1599750' '(at2g21100 : 144.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G65870.1); Has 857 Blast hits to 856 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 133.0) no description available & (reliability: 278.0) & (original description: Putative DIR23, Description = Dirigent protein 23, PFAM = PF03018)' T '20.1' 'stress.biotic' 'niben101scf00919_248983-259801' '(at5g64930 : 335.0) Regulator of expression of pathogenesis-related (PR) genes. Participates in signal transduction pathways involved in plant defense (systemic acquired resistance -SAR).; CONSTITUTIVE EXPRESSION OF PR GENES 5 (CPR5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 670.0) & (original description: Putative CPR5, Description = CPR5, PFAM = )' T '20.1' 'stress.biotic' 'niben101scf00946_83509-86339' '(at3g11660 : 223.0) encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus. Localization of the gene product is similar to that of NHL3 (plasma membrane) but it is yet inconclusive.; NDR1/HIN1-like 1 (NHL1); CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT3G52470.1); Has 917 Blast hits to 917 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 917; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 141.0) no description available & (reliability: 446.0) & (original description: Putative NHL12, Description = NDR1/HIN1-like protein 12, PFAM = PF03168)' T '20.1' 'stress.biotic' 'niben101scf00953_300641-303196' '(p11670|prb1_tobac : 288.0) Basic form of pathogenesis-related protein 1 precursor (PRP 1) - Nicotiana tabacum (Common tobacco) & (at4g33720 : 184.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: basic pathogenesis-related protein 1 (TAIR:AT2G14580.1); Has 3131 Blast hits to 3024 proteins in 381 species: Archae - 0; Bacteria - 70; Metazoa - 1690; Fungi - 339; Plants - 919; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|29108 : 142.0) no description available & (gnl|cdd|38227 : 116.0) no description available & (reliability: 368.0) & (original description: Putative pr1b, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T '20.1' 'stress.biotic' 'niben101scf00953_315511-318632' '(p11670|prb1_tobac : 307.0) Basic form of pathogenesis-related protein 1 precursor (PRP 1) - Nicotiana tabacum (Common tobacco) & (at4g33720 : 199.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: basic pathogenesis-related protein 1 (TAIR:AT2G14580.1); Has 3131 Blast hits to 3024 proteins in 381 species: Archae - 0; Bacteria - 70; Metazoa - 1690; Fungi - 339; Plants - 919; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|29108 : 165.0) no description available & (gnl|cdd|38227 : 127.0) no description available & (reliability: 398.0) & (original description: Putative pr1, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T '20.1' 'stress.biotic' 'niben101scf00953_542627-545115' '(p11670|prb1_tobac : 205.0) Basic form of pathogenesis-related protein 1 precursor (PRP 1) - Nicotiana tabacum (Common tobacco) & (at1g50060 : 186.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT1G50050.1); Has 2790 Blast hits to 2723 proteins in 351 species: Archae - 0; Bacteria - 60; Metazoa - 1420; Fungi - 326; Plants - 897; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|29108 : 142.0) no description available & (gnl|cdd|38227 : 110.0) no description available & (reliability: 372.0) & (original description: Putative PR1B1, Description = Pathogenesis-related leaf protein 6, PFAM = PF00188)' T '20.1' 'stress.biotic' 'niben101scf00960_421102-425544' '(at5g65210 : 417.0) Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.; TGA1; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 4 (TAIR:AT5G10030.2); Has 674 Blast hits to 672 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 649; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (p14232|tga1a_tobac : 348.0) TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a) (ASF-1 protein) - Nicotiana tabacum (Common tobacco) & (reliability: 834.0) & (original description: Putative TGA1, Description = Transcription factor TGA1, PFAM = PF14144;PF00170)' T '20.1' 'stress.biotic' 'niben101scf00986_75659-86022' '(at1g74190 : 179.0) receptor like protein 15 (RLP15); INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 13 (TAIR:AT1G74170.1); Has 128946 Blast hits to 31204 proteins in 1189 species: Archae - 49; Bacteria - 10411; Metazoa - 29723; Fungi - 1446; Plants - 77583; Viruses - 38; Other Eukaryotes - 9696 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 98.6) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 346.0) & (original description: Putative BnaC06g35080D, Description = BnaC06g35080D protein, PFAM = )' T '20.1' 'stress.biotic' 'niben101scf01013_734995-802431' '(gnl|cdd|39857 : 106.0) no description available & (gnl|cdd|85132 : 105.0) no description available & (at3g46530 : 97.8) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative , Description = , PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf01013_796881-800452' '(at1g58390 : 194.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, LP.08 eight leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58400.1); Has 14341 Blast hits to 13745 proteins in 491 species: Archae - 4; Bacteria - 531; Metazoa - 280; Fungi - 132; Plants - 13314; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|39857 : 188.0) no description available & (reliability: 368.0) & (original description: Putative PGSC0003DMG400013407, Description = , PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf01013_838054-845165' '(gnl|cdd|39857 : 343.0) no description available & (gnl|cdd|85132 : 251.0) no description available & (at1g53350 : 247.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative PGSC0003DMG400007462, Description = NBS-LRR class resistance protein Fy2-Ry2, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf01015_180232-183828' '(p09762|win2_soltu : 278.0) Wound-induced protein WIN2 precursor - Solanum tuberosum (Potato) & (at3g04720 : 206.0) Encodes a protein similar to the antifungal chitin-binding protein hevein from rubber tree latex. mRNA levels increase in response to ethylene and turnip crinkle virus infection.; pathogenesis-related 4 (PR4); FUNCTIONS IN: chitin binding; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Barwin (InterPro:IPR001153), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726), Barwin-related endoglucanase (InterPro:IPR009009), Chitin-binding, type 1, conserved site (InterPro:IPR018371), Barwin-like endoglucanase (InterPro:IPR014733), Barwin, conserved site (InterPro:IPR018226), Chitin-binding, type 1 (InterPro:IPR001002); BEST Arabidopsis thaliana protein match is: basic chitinase (TAIR:AT3G12500.1); Has 1702 Blast hits to 1458 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 253; Plants - 1414; Viruses - 10; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|64814 : 206.0) no description available & (reliability: 412.0) & (original description: Putative WIN1, Description = Wound-induced protein WIN1, PFAM = PF00187;PF00967)' T '20.1' 'stress.biotic' 'niben101scf01017_610120-615953' '(at1g53350 : 518.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|39857 : 497.0) no description available & (gnl|cdd|85132 : 260.0) no description available & (reliability: 1022.0) & (original description: Putative PGSC0003DMG400029344, Description = Disease resistance protein RPP13, putative, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf01027_258416-262335' '(at1g64140 : 464.0) BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 3596 Blast hits to 2004 proteins in 150 species: Archae - 0; Bacteria - 54; Metazoa - 1597; Fungi - 38; Plants - 513; Viruses - 9; Other Eukaryotes - 1385 (source: NCBI BLink). & (reliability: 928.0) & (original description: Putative WRKY19, Description = BnaC09g06380D protein, PFAM = )' T '20.1' 'stress.biotic' 'niben101scf01061_180126-184226' '(at5g17540 : 380.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase (TAIR:AT3G03480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 319.0) no description available & (o24645|hcbt1_diaca : 148.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 760.0) & (original description: Putative AMAT, Description = Methanol O-anthraniloyltransferase, PFAM = PF02458)' T '20.1' 'stress.biotic' 'niben101scf01066_354735-359679' '(at3g16920 : 486.0) Encodes a chitinase-like protein expressed predominantly in stems. Mutants accumulate ligning in etiolated hypocotyls.; chitinase-like protein 2 (CTL2); FUNCTIONS IN: chitinase activity; INVOLVED IN: lignin biosynthetic process; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, C globular stage, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 19 (InterPro:IPR016283), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT1G05850.1); Has 1961 Blast hits to 1960 proteins in 411 species: Archae - 0; Bacteria - 465; Metazoa - 25; Fungi - 3; Plants - 1425; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|29557 : 269.0) no description available & (gnl|cdd|39939 : 259.0) no description available & (p06215|chit_phavu : 189.0) Endochitinase precursor (EC 3.2.1.14) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 972.0) & (original description: Putative CTL1, Description = Chitinase-like protein 1, PFAM = PF00182)' T '20.1' 'stress.biotic' 'niben101scf01145_13490-18180' '(gnl|cdd|39857 : 324.0) no description available & (gnl|cdd|85132 : 260.0) no description available & (at5g43470 : 246.0) Confers resistance to Peronospora parasitica. In arabidopsis ecotype Dijon-17, HRT-mediated signaling is dependent on light for the induction of hypersensitive response and resistance to turnip crinkle virus.; RECOGNITION OF PERONOSPORA PARASITICA 8 (RPP8); FUNCTIONS IN: nucleotide binding; INVOLVED IN: defense response to virus, response to light stimulus, response to other organism, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative PGSC0003DMG400018462, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf01145_337165-346481' '(at4g19040 : 1098.0) Encodes a PH and START domain-containing protein that mediates resistance to pathogenic fungi. Resistance requires salicylic acid signalling. Mutants are resistant to E. cichoracearum. Expressed throughout plant tissues and possibly localized to membranes /mitochondrion.; ENHANCED DISEASE RESISTANCE 2 (EDR2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769), Pleckstrin homology-type (InterPro:IPR011993), Lipid-binding START (InterPro:IPR002913), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein (TAIR:AT5G45560.1). & (gnl|cdd|70520 : 239.0) no description available & (reliability: 2196.0) & (original description: Putative EDR2, Description = Protein ENHANCED DISEASE RESISTANCE 2, PFAM = PF01852;PF07059)' T '20.1' 'stress.biotic' 'niben101scf01189_465369-468148' '(at5g36970 : 201.0) NDR1/HIN1-like protein, expression induced during incompatible response to a pathogen, expression is at least partly dependent on the salicylic acid signaling pathway; NDR1/HIN1-like 25 (NHL25); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response, incompatible interaction, salicylic acid mediated signaling pathway; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G65690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70773 : 137.0) no description available & (reliability: 402.0) & (original description: Putative NHL25, Description = NDR1/HIN1-like 25, PFAM = PF03168)' T '20.1' 'stress.biotic' 'niben101scf01212_251991-262439' '(at4g18470 : 306.0) Negative regulator of systemic acquired resistance (SAR), repressor of pathogenesis-related PR gene expression which is removed by NPR1 upon induction of SAR. Encodes leucine-rich nuclear protein. Conserved in plants, with putative orthologs found in several plant species. Many NPR1-dependent PR gene are specifically derepressed in the sni1 mutant. The structural similarity of SNI1 to Armadillo repeat proteins implies that SNI1 may form a scaffold for interaction with proteins that modulate transcription. Histone modification may be involved in SNI1-mediated repression of PR genes.; SUPPRESSOR OF NPR1-1, INDUCIBLE 1 (SNI1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 612.0) & (original description: Putative SNI1, Description = At4g18470, PFAM = )' T '20.1' 'stress.biotic' 'niben101scf01214_313614-318333' '(gnl|cdd|39857 : 299.0) no description available & (gnl|cdd|85132 : 235.0) no description available & (at1g58390 : 231.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, LP.08 eight leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58400.1); Has 14341 Blast hits to 13745 proteins in 491 species: Archae - 4; Bacteria - 531; Metazoa - 280; Fungi - 132; Plants - 13314; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative NBS173-3, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf01291_534445-537685' '(at2g46170 : 226.0) Reticulon family protein; INVOLVED IN: response to karrikin; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT3G61560.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37003 : 196.0) no description available & (gnl|cdd|66169 : 177.0) no description available & (reliability: 440.0) & (original description: Putative PGSC0003DMG400006308, Description = Reticulon-like protein, PFAM = PF02453)' T '20.1' 'stress.biotic' 'niben101scf01319_718815-723452' '(at1g75800 : 362.0) Pathogenesis-related thaumatin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G20030.2); Has 1631 Blast hits to 1621 proteins in 190 species: Archae - 2; Bacteria - 41; Metazoa - 64; Fungi - 79; Plants - 1416; Viruses - 4; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|47535 : 255.0) no description available & (p83332|tlp1_prupe : 244.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 724.0) & (original description: Putative TLP3, Description = Thaumatin-like protein 3, PFAM = PF00314)' T '20.1' 'stress.biotic' 'niben101scf01326_1210830-1215413' '(at5g40020 : 314.0) Pathogenesis-related thaumatin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT4G38660.1); Has 1558 Blast hits to 1540 proteins in 173 species: Archae - 0; Bacteria - 31; Metazoa - 56; Fungi - 80; Plants - 1384; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|47535 : 201.0) no description available & (p83335|tlp2_prupe : 171.0) Thaumatin-like protein 2 precursor (PpAZ8) - Prunus persica (Peach) & (reliability: 628.0) & (original description: Putative olp, Description = Osmotin-like protein, PFAM = PF00314)' T '20.1' 'stress.biotic' 'niben101scf01341_187800-190521' '(at2g15220 : 282.0) Plant basic secretory protein (BSP) family protein; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, basic secretory protein (InterPro:IPR007541); BEST Arabidopsis thaliana protein match is: Plant basic secretory protein (BSP) family protein (TAIR:AT2G15130.1); Has 296 Blast hits to 296 proteins in 84 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi - 66; Plants - 170; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|68039 : 270.0) no description available & (reliability: 564.0) & (original description: Putative At2g15130, Description = Plant basic secretory family protein, PFAM = PF04450)' T '20.1' 'stress.biotic' 'niben101scf01375_252209-256009' '(at4g11220 : 265.0) VIRB2-interacting protein 2 (BTI2); INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 1 (TAIR:AT4G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37003 : 243.0) no description available & (gnl|cdd|66169 : 230.0) no description available & (reliability: 518.0) & (original description: Putative PGSC0003DMG400019959, Description = Reticulon-like protein, PFAM = PF02453)' T '20.1' 'stress.biotic' 'niben101scf01386_22394-25809' '(p56725|zox_phavu : 434.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36780 : 186.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 155.0) no description available & (gnl|cdd|79510 : 88.5) no description available & (reliability: 344.0) & (original description: Putative CISZOG1, Description = Cis-zeatin O-glucosyltransferase 1, PFAM = PF00201)' T '20.1' 'stress.biotic' 'niben101scf01392_120910-127676' '(at1g20780 : 172.0) Encodes a protein containing a U-box and an ARM domain.; senescence-associated E3 ubiquitin ligase 1 (SAUL1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of chlorophyll catabolic process, regulation of chlorophyll biosynthetic process, leaf senescence, regulation of abscisic acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G76390.2); Has 2790 Blast hits to 2660 proteins in 201 species: Archae - 0; Bacteria - 20; Metazoa - 434; Fungi - 161; Plants - 1969; Viruses - 3; Other Eukaryotes - 203 (source: NCBI BLink). & (gnl|cdd|47808 : 82.6) no description available & (reliability: 344.0) & (original description: Putative glysoja_015640, Description = U-box domain-containing protein 43, PFAM = PF00514;PF04564)' T '20.1' 'stress.biotic' 'niben101scf01398_90211-94931' '(gnl|cdd|39857 : 269.0) no description available & (gnl|cdd|85132 : 259.0) no description available & (at3g46730 : 204.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46530.1); Has 14658 Blast hits to 14197 proteins in 483 species: Archae - 6; Bacteria - 489; Metazoa - 440; Fungi - 102; Plants - 13534; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative Sw-5, Description = Tomato spotted wilt virus resistance protein, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf01466_180275-185432' '(gnl|cdd|39857 : 137.0) no description available & (at3g07040 : 115.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (gnl|cdd|85132 : 115.0) no description available & (reliability: 230.0) & (original description: Putative PGSC0003DMG400006316, Description = Disease resistance protein RPM1, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf01466_185652-189635' '(at3g07040 : 307.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (gnl|cdd|39857 : 305.0) no description available & (gnl|cdd|85132 : 207.0) no description available & (reliability: 614.0) & (original description: Putative PGSC0003DMG400006316, Description = NBS resistance protein RGA49, PFAM = PF00931;PF13855)' T '20.1' 'stress.biotic' 'niben101scf01466_186051-190360' '(gnl|cdd|39857 : 313.0) no description available & (at3g07040 : 309.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (gnl|cdd|85132 : 207.0) no description available & (reliability: 618.0) & (original description: Putative PGSC0003DMG400044423, Description = NBS resistance protein RGA49, PFAM = PF13855;PF00931)' T '20.1' 'stress.biotic' 'niben101scf01653_371064-373119' '(at5g02140 : 335.0) Pathogenesis-related thaumatin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G18250.2); Has 1588 Blast hits to 1558 proteins in 178 species: Archae - 0; Bacteria - 37; Metazoa - 56; Fungi - 96; Plants - 1388; Viruses - 2; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|47535 : 215.0) no description available & (q9fsg7|tp1a_maldo : 171.0) Thaumatin-like protein 1a precursor (Allergen Mal d 2) (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 670.0) & (original description: Putative Os11g0706600, Description = Thaumatin-like protein, PFAM = PF00314)' T '20.1' 'stress.biotic' 'niben101scf01756_326559-331424' '(at2g46170 : 278.0) Reticulon family protein; INVOLVED IN: response to karrikin; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT3G61560.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37003 : 261.0) no description available & (gnl|cdd|66169 : 248.0) no description available & (reliability: 550.0) & (original description: Putative RTNLB5, Description = Reticulon-like protein B5, PFAM = PF02453)' T '20.1' 'stress.biotic' 'niben101scf01789_319106-323380' '(gnl|cdd|47913 : 267.0) no description available & (at4g19810 : 246.0) Glycosyl hydrolase family protein with chitinase insertion domain; FUNCTIONS IN: cation binding, chitinase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Chitinase II (InterPro:IPR011583), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein with chitinase insertion domain (TAIR:AT4G19820.1); Has 6461 Blast hits to 6286 proteins in 1137 species: Archae - 29; Bacteria - 2687; Metazoa - 1798; Fungi - 1311; Plants - 165; Viruses - 109; Other Eukaryotes - 362 (source: NCBI BLink). & (gnl|cdd|38017 : 236.0) no description available & (reliability: 492.0) & (original description: Putative chit5, Description = Putative class 5 chitinase, PFAM = PF00704)' T '20.1' 'stress.biotic' 'niben101scf01831_163236-166545' '(q9fsg7|tp1a_maldo : 259.0) Thaumatin-like protein 1a precursor (Allergen Mal d 2) (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|47535 : 241.0) no description available & (at4g38670 : 236.0) Pathogenesis-related thaumatin superfamily protein; INVOLVED IN: response to other organism; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT4G36010.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative TL1, Description = Thaumatin-like protein 1a, PFAM = PF00314)' T '20.1' 'stress.biotic' 'niben101scf01831_194436-197464' '(at2g17860 : 195.0) Pathogenesis-related thaumatin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT4G36010.2); Has 1602 Blast hits to 1583 proteins in 180 species: Archae - 0; Bacteria - 43; Metazoa - 56; Fungi - 78; Plants - 1409; Viruses - 4; Other Eukaryotes - 12 (source: NCBI BLink). & (q9fsg7|tp1a_maldo : 194.0) Thaumatin-like protein 1a precursor (Allergen Mal d 2) (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|47535 : 185.0) no description available & (reliability: 390.0) & (original description: Putative pr5, Description = Pathogenesis-related thaumatin family protein, PFAM = PF00314)' T '20.1' 'stress.biotic' 'niben101scf01917_500806-504467' '(at5g61240 : 227.0) Leucine-rich repeat (LRR) family protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G13910.1). & (p93194|rpk1_iponi : 89.4) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 454.0) & (original description: Putative EILP, Description = LRR-GTPase of the ROCO family, PFAM = PF13855;PF13855)' T '20.1' 'stress.biotic' 'niben101scf01934_514657-518146' '(gnl|cdd|66675 : 124.0) no description available & (at1g22900 : 115.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT5G42500.1); Has 955 Blast hits to 954 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 955; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative Ccrd_007776, Description = Plant disease resistance response protein, PFAM = PF03018)' T '20.1' 'stress.biotic' 'niben101scf01998_372277-375671' '(p56725|zox_phavu : 469.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g29730 : 192.0) UDP-glucosyl transferase 71D1 (UGT71D1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G29710.1); Has 7713 Blast hits to 7666 proteins in 413 species: Archae - 0; Bacteria - 339; Metazoa - 2353; Fungi - 25; Plants - 4863; Viruses - 68; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 153.0) no description available & (gnl|cdd|79510 : 98.5) no description available & (reliability: 358.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T '20.1' 'stress.biotic' 'niben101scf01999_720022-722561' '(p07053|pr1b_tobac : 300.0) Pathogenesis-related protein 1B precursor (PR-1B) - Nicotiana tabacum (Common tobacco) & (at4g33720 : 190.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: basic pathogenesis-related protein 1 (TAIR:AT2G14580.1); Has 3131 Blast hits to 3024 proteins in 381 species: Archae - 0; Bacteria - 70; Metazoa - 1690; Fungi - 339; Plants - 919; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|29108 : 148.0) no description available & (gnl|cdd|38227 : 118.0) no description available & (reliability: 380.0) & (original description: Putative pr1, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T '20.1' 'stress.biotic' 'niben101scf02041_1714-5025' '(p17514|chiq_tobac : 460.0) Acidic endochitinase Q precursor (EC 3.2.1.14) (Pathogenesis-related protein Q) (PR-Q) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84590 : 342.0) no description available & (at3g12500 : 290.0) encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses.; basic chitinase (HCHIB); FUNCTIONS IN: chitinase activity; INVOLVED IN: response to cadmium ion, defense response to fungus, jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT4G01700.1); Has 2944 Blast hits to 2653 proteins in 549 species: Archae - 0; Bacteria - 615; Metazoa - 38; Fungi - 228; Plants - 1922; Viruses - 10; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|39939 : 202.0) no description available & (reliability: 580.0) & (original description: Putative chi1, Description = Chitinase, PFAM = PF00182)' T '20.1' 'stress.biotic' 'niben101scf02044_228419-231239' '(at2g15220 : 239.0) Plant basic secretory protein (BSP) family protein; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, basic secretory protein (InterPro:IPR007541); BEST Arabidopsis thaliana protein match is: Plant basic secretory protein (BSP) family protein (TAIR:AT2G15130.1); Has 296 Blast hits to 296 proteins in 84 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi - 66; Plants - 170; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|68039 : 222.0) no description available & (reliability: 478.0) & (original description: Putative At2g15220, Description = At2g15220/F15A23.4, PFAM = PF04450)' T '20.1' 'stress.biotic' 'niben101scf02049_363187-367354' '(at1g78780 : 333.0) pathogenesis-related family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 197 Blast hits to 196 proteins in 67 species: Archae - 0; Bacteria - 51; Metazoa - 15; Fungi - 36; Plants - 93; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (p16273|prpx_horvu : 202.0) Pathogen-related protein - Hordeum vulgare (Barley) & (reliability: 666.0) & (original description: Putative , Description = Pathogen-related protein, PFAM = )' T '20.1' 'stress.biotic' 'niben101scf02057_248617-261383' '(gnl|cdd|39857 : 296.0) no description available & (gnl|cdd|85132 : 254.0) no description available & (at5g35450 : 232.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 420.0) & (original description: Putative , Description = NBS resistance protein RGA40, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf02133_55542-62165' '(gnl|cdd|39857 : 328.0) no description available & (at1g53350 : 259.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|85132 : 232.0) no description available & (reliability: 500.0) & (original description: Putative PGSC0003DMG400007462, Description = NRC2a, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf02168_181187-186678' '(gnl|cdd|39857 : 270.0) no description available & (gnl|cdd|85132 : 233.0) no description available & (at1g59780 : 221.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root, flower, synergid; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58400.1); Has 16454 Blast hits to 15209 proteins in 528 species: Archae - 16; Bacteria - 828; Metazoa - 1085; Fungi - 125; Plants - 14178; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink). & (reliability: 434.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF12061;PF00931)' T '20.1' 'stress.biotic' 'niben101scf02171_48486-51616' '(at3g54420 : 290.0) encodes an EP3 chitinase that is expressed during somatic embryogenesis in 'nursing' cells surrounding the embryos but not in embryos themselves. The gene is also expressed in mature pollen and growing pollen tubes until they enter the receptive synergid, but not in endosperm and integuments as in carrot. Post-embryonically, expression is found in hydathodes, stipules, root epidermis and emerging root hairs.; homolog of carrot EP3-3 chitinase (EP3); FUNCTIONS IN: chitinase activity; INVOLVED IN: somatic embryogenesis, plant-type hypersensitive response; LOCATED IN: cell wall; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT2G43590.1); Has 2660 Blast hits to 2432 proteins in 504 species: Archae - 0; Bacteria - 547; Metazoa - 34; Fungi - 178; Plants - 1776; Viruses - 22; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|29557 : 282.0) no description available & (p27054|chi4_phavu : 271.0) Endochitinase PR4 precursor (EC 3.2.1.14) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|39939 : 230.0) no description available & (reliability: 580.0) & (original description: Putative chi, Description = Class IV chitinase, PFAM = PF00182)' T '20.1' 'stress.biotic' 'niben101scf02248_86863-93919' '(gnl|cdd|39857 : 307.0) no description available & (at1g53350 : 267.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|85132 : 222.0) no description available & (reliability: 522.0) & (original description: Putative RGA88, Description = NBS-coding resistance protein, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf02303_171828-178118' '(gnl|cdd|36842 : 303.0) no description available & (at5g47120 : 271.0) Encodes BI-1, a homolog of mammalian Bax inhibitor 1. Functions as an attenuator of biotic and abiotic types of cell death. Bax-induced cell death can be downregulated by ectopically expressing AtBI in planta.; BAX inhibitor 1 (BI1); CONTAINS InterPro DOMAIN/s: Inhibitor of apoptosis-promoting Bax1 related (InterPro:IPR006214), Bax inhibitor 1, conserved site (InterPro:IPR006213); BEST Arabidopsis thaliana protein match is: Bax inhibitor-1 family protein (TAIR:AT4G17580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9mbd8|bi1_orysa : 236.0) Bax inhibitor 1 (BI-1) (OsBI-1) - Oryza sativa (Rice) & (gnl|cdd|85194 : 94.9) no description available & (reliability: 542.0) & (original description: Putative BI1, Description = Bax inhibitor 1, PFAM = PF01027)' T '20.1' 'stress.biotic' 'niben101scf02400_186245-220453' '(at1g02120 : 426.0) Encodes VAD1 (Vascular Associated Death1), a regulator of cell death and defense responses in vascular tissues. VAD1 is a putative membrane associated protein and contains a GRAM domain. vad1 is a lesion mimic mutant that exhibits light conditional appearance of propagative HR (hypersensitive response)-like lesions along the vascular system.; VASCULAR ASSOCIATED DEATH1 (VAD1); INVOLVED IN: defense response to bacterium, negative regulation of programmed cell death; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: C2 domain-containing protein / GRAM domain-containing protein (TAIR:AT3G59660.1); Has 1155 Blast hits to 1034 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 619; Fungi - 222; Plants - 157; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|36250 : 135.0) no description available & (reliability: 852.0) & (original description: Putative VAD1, Description = Protein VASCULAR ASSOCIATED DEATH 1, chloroplastic, PFAM = PF16016;PF02893)' T '20.1' 'stress.biotic' 'niben101scf02401_32596-37305' '(at3g18165 : 122.0) Encodes MOS4 (Modifier of snc1, 4), a nuclear protein homologous to human Breast Cancer-Amplified Sequence (BCAS2). MOS4 interacts with AtCDC5 and PRL1. All three proteins are essential for plant innate immunity.; Modifier of snc1,4 (MOS4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response signaling pathway, resistance gene-independent, defense response signaling pathway, resistance gene-dependent, defense response to bacterium, defense response to fungus; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Breast carcinoma amplified sequence 2 (InterPro:IPR008409); Has 346 Blast hits to 346 proteins in 142 species: Archae - 0; Bacteria - 2; Metazoa - 155; Fungi - 78; Plants - 42; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|69236 : 115.0) no description available & (gnl|cdd|38306 : 91.3) no description available & (reliability: 244.0) & (original description: Putative MOS4, Description = Pre-mRNA-splicing factor SPF27-like protein, PFAM = PF05700)' T '20.1' 'stress.biotic' 'niben101scf02407_552738-558032' '(gnl|cdd|36842 : 99.0) no description available & (at5g47120 : 95.9) Encodes BI-1, a homolog of mammalian Bax inhibitor 1. Functions as an attenuator of biotic and abiotic types of cell death. Bax-induced cell death can be downregulated by ectopically expressing AtBI in planta.; BAX inhibitor 1 (BI1); CONTAINS InterPro DOMAIN/s: Inhibitor of apoptosis-promoting Bax1 related (InterPro:IPR006214), Bax inhibitor 1, conserved site (InterPro:IPR006213); BEST Arabidopsis thaliana protein match is: Bax inhibitor-1 family protein (TAIR:AT4G17580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative PGSC0003DMG400036059, Description = , PFAM = )' T '20.1' 'stress.biotic' 'niben101scf02410_70010-74538' '(gnl|cdd|84590 : 406.0) no description available & (p24091|chi2_tobac : 385.0) Endochitinase B precursor (EC 3.2.1.14) (CHN-B) - Nicotiana tabacum (Common tobacco) & (at3g12500 : 354.0) encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses.; basic chitinase (HCHIB); FUNCTIONS IN: chitinase activity; INVOLVED IN: response to cadmium ion, defense response to fungus, jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT4G01700.1); Has 2944 Blast hits to 2653 proteins in 549 species: Archae - 0; Bacteria - 615; Metazoa - 38; Fungi - 228; Plants - 1922; Viruses - 10; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|39939 : 269.0) no description available & (reliability: 708.0) & (original description: Putative CHI14, Description = Basic endochitinase, PFAM = PF00182)' T '20.1' 'stress.biotic' 'niben101scf02502_884002-887483' '(at2g36800 : 452.0) Encodes a DON-Glucosyltransferase. The UGT73C5 glucosylates both brassinolide and castasterone in the 23-O position. The enzyme is presumably involved in the homeostasis of those steroid hormones hence regulating BR activity. Transgenic plants overexpressing UGT73C5 show a typical BR-deficient phenotype.; don-glucosyltransferase 1 (DOGT1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73C6 (TAIR:AT2G36790.1); Has 7663 Blast hits to 7564 proteins in 401 species: Archae - 0; Bacteria - 196; Metazoa - 2172; Fungi - 32; Plants - 5134; Viruses - 64; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 219.0) no description available & (p56725|zox_phavu : 143.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 93.5) no description available & (reliability: 904.0) & (original description: Putative UGT19, Description = Glycosyltransferase, PFAM = PF00201)' T '20.1' 'stress.biotic' 'niben101scf02518_177053-189921' '(gnl|cdd|39857 : 180.0) no description available & (at3g07040 : 137.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (gnl|cdd|85132 : 82.6) no description available & (reliability: 274.0) & (original description: Putative glysoja_000650, Description = NB-ARC domain disease resistance protein, putative, PFAM = PF00931;PF00931)' T '20.1' 'stress.biotic' 'niben101scf02544_94867-109997' '(at3g52430 : 390.0) Encodes a lipase-like gene that is important for salicylic acid signaling and function in resistance (R) gene-mediated and basal plant disease resistance. PAD4 can interact directly with EDS1, another disease resistance signaling protein. Expressed at elevated level in response to green peach aphid (GPA) feeding, and modulates the GPA feeding-induced leaf senescence through a mechanism that doesn't require camalexin synthesis and salicylic acid (SA) signaling. Required for the ssi2-dependent heightened resistance to GPA.; PHYTOALEXIN DEFICIENT 4 (PAD4); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: senescence-associated gene 101 (TAIR:AT5G14930.2); Has 722 Blast hits to 622 proteins in 73 species: Archae - 0; Bacteria - 23; Metazoa - 17; Fungi - 11; Plants - 620; Viruses - 1; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|73213 : 88.7) no description available & (reliability: 780.0) & (original description: Putative BnaCnng61630D, Description = BnaCnng61630D protein, PFAM = PF01764)' T '20.1' 'stress.biotic' 'niben101scf02549_375227-383809' '(gnl|cdd|69947 : 448.0) no description available & (at2g02180 : 370.0) Necessary for the efficient multiplication of tobamoviruses.; tobamovirus multiplication protein 3 (TOM3); INVOLVED IN: viral replication complex formation and maintenance; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1084) (TAIR:AT1G14530.2); Has 262 Blast hits to 261 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 740.0) & (original description: Putative TOM3, Description = Tobamovirus multiplication protein 3, PFAM = PF06454)' T '20.1' 'stress.biotic' 'niben101scf02553_268025-273368' '(gnl|cdd|39857 : 440.0) no description available & (at3g46530 : 432.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|85132 : 254.0) no description available & (reliability: 864.0) & (original description: Putative RPP13, Description = Disease resistance protein RPP13 variant, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf02610_186011-190384' '(at1g70830 : 249.0) MLP-like protein 28 (MLP28); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 34 (TAIR:AT1G70850.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84754 : 159.0) no description available & (reliability: 498.0) & (original description: Putative MLP, Description = MLP-like protein 28, PFAM = PF00407;PF00407)' T '20.1' 'stress.biotic' 'niben101scf02618_422300-425424' '(gnl|cdd|84754 : 121.0) no description available & (at1g70880 : 97.4) Polyketide cyclase/dehydrase and lipid transport superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.5); Has 440 Blast hits to 408 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 440; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative NtSN1b, Description = Putative PR-10 type pathogenesis-related protein, PFAM = PF00407)' T '20.1' 'stress.biotic' 'niben101scf02618_510410-513464' '(gnl|cdd|84754 : 120.0) no description available & (at1g70830 : 100.0) MLP-like protein 28 (MLP28); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 34 (TAIR:AT1G70850.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative orf, Description = Putative PR-10 type pathogenesis-related protein, PFAM = PF00407)' T '20.1' 'stress.biotic' 'niben101scf02681_205582-211674' '(at4g37000 : 270.0) Mutants have spontaneous spreading cell death lesions and constitutive activation of defenses in the absence of pathogen infection. Its product was shown to display red chlorophyll catabolite reductase (RCCR), which catalyzes one step in the breakdown of the porphyrin component of chlorophyll. The enzyme was further assessed to be a Type-1 (pFCC-1-producing) RCCR.Upon P. syringae infection, ACD2 localization shifts from being largely in chloroplasts to partitioning to chloroplasts, mitochondria, and to a small extent, cytosol. Overexpression of ACD2 delayed cell death and the replication of P. syringae.; ACCELERATED CELL DEATH 2 (ACD2); FUNCTIONS IN: red chlorophyll catabolite reductase activity; INVOLVED IN: chlorophyll catabolic process, defense response, incompatible interaction, regulation of programmed cell death, regulation of plant-type hypersensitive response; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Red chlorophyll catabolite reductase (InterPro:IPR009439); Has 181 Blast hits to 181 proteins in 30 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|69899 : 262.0) no description available & (q9mtq6|rccr_horvu : 194.0) Red chlorophyll catabolite reductase (EC 1.-.-.-) (RCC reductase) (HvRCCR) (Fragment) - Hordeum vulgare (Barley) & (reliability: 540.0) & (original description: Putative RCCR, Description = Red chlorophyll catabolite reductase, chloroplastic, PFAM = PF06405)' T '20.1' 'stress.biotic' 'niben101scf02688_107772-112438' '(gnl|cdd|39857 : 338.0) no description available & (at5g35450 : 312.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 221.0) no description available & (reliability: 592.0) & (original description: Putative tm-2, Description = Tm-2 protein, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf02705_161833-167654' '(at5g47120 : 332.0) Encodes BI-1, a homolog of mammalian Bax inhibitor 1. Functions as an attenuator of biotic and abiotic types of cell death. Bax-induced cell death can be downregulated by ectopically expressing AtBI in planta.; BAX inhibitor 1 (BI1); CONTAINS InterPro DOMAIN/s: Inhibitor of apoptosis-promoting Bax1 related (InterPro:IPR006214), Bax inhibitor 1, conserved site (InterPro:IPR006213); BEST Arabidopsis thaliana protein match is: Bax inhibitor-1 family protein (TAIR:AT4G17580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36842 : 295.0) no description available & (q9mbd8|bi1_orysa : 263.0) Bax inhibitor 1 (BI-1) (OsBI-1) - Oryza sativa (Rice) & (gnl|cdd|85194 : 89.9) no description available & (reliability: 664.0) & (original description: Putative tegt, Description = Bax inhibitor 1, PFAM = PF01027)' T '20.1' 'stress.biotic' 'niben101scf02821_1332591-1348674' '(at4g17910 : 108.0) transferases, transferring acyl groups; FUNCTIONS IN: transferase activity, transferring acyl groups; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: GWT1 (InterPro:IPR009447); Has 62 Blast hits to 62 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 21; Plants - 15; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative PIGW, Description = Phosphatidylinositol-glycan biosynthesis class W protein, PFAM = )' T '20.1' 'stress.biotic' 'niben101scf02854_1003263-1010336' '(at1g74190 : 474.0) receptor like protein 15 (RLP15); INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 13 (TAIR:AT1G74170.1); Has 128946 Blast hits to 31204 proteins in 1189 species: Archae - 49; Bacteria - 10411; Metazoa - 29723; Fungi - 1446; Plants - 77583; Viruses - 38; Other Eukaryotes - 9696 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 195.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35693 : 105.0) no description available & (reliability: 878.0) & (original description: Putative PGSC0003DMG400005590, Description = Receptor like protein 15, putative, PFAM = PF13516;PF13516;PF08263;PF00560;PF00560;PF00560;PF00560;PF13855)' T '20.1' 'stress.biotic' 'niben101scf02854_1003312-1011274' '(at1g74190 : 479.0) receptor like protein 15 (RLP15); INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 13 (TAIR:AT1G74170.1); Has 128946 Blast hits to 31204 proteins in 1189 species: Archae - 49; Bacteria - 10411; Metazoa - 29723; Fungi - 1446; Plants - 77583; Viruses - 38; Other Eukaryotes - 9696 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 194.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35693 : 104.0) no description available & (reliability: 912.0) & (original description: Putative PGSC0003DMG400005590, Description = Receptor like protein 15, putative, PFAM = PF08263;PF13516;PF13516;PF13855;PF00560;PF00560;PF00560;PF00560)' T '20.1' 'stress.biotic' 'niben101scf02899_729470-732177' '(at3g11650 : 209.0) Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus and spermine. Overexpression of the gene induces the expression of PR-1 gene and shows light-dependent 'speck disease-like' symptom on leaves. The gene product is localized to the chloroplast; NDR1/HIN1-like 2 (NHL2); CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: NDR1/HIN1-like 3 (TAIR:AT5G06320.1); Has 1008 Blast hits to 1007 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1008; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 146.0) no description available & (reliability: 418.0) & (original description: Putative hin1, Description = Harpin inducing protein, PFAM = PF03168)' T '20.1' 'stress.biotic' 'niben101scf02902_95480-101913' '(gnl|cdd|39857 : 283.0) no description available & (gnl|cdd|85132 : 245.0) no description available & (at3g46530 : 244.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 488.0) & (original description: Putative SW5F, Description = NBS resistance protein RGA34, PFAM = PF12061;PF00931)' T '20.1' 'stress.biotic' 'niben101scf03046_382182-385779' '(at2g36770 : 481.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7907 Blast hits to 7812 proteins in 435 species: Archae - 0; Bacteria - 273; Metazoa - 2293; Fungi - 33; Plants - 5130; Viruses - 108; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 225.0) no description available & (p56725|zox_phavu : 185.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 82.7) no description available & (reliability: 950.0) & (original description: Putative UGT73D1, Description = UDP-glycosyltransferase 73D1, PFAM = PF00201)' T '20.1' 'stress.biotic' 'niben101scf03048_148366-153619' '(gnl|cdd|39857 : 257.0) no description available & (at5g48620 : 229.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 156.0) no description available & (reliability: 434.0) & (original description: Putative , Description = , PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf03085_821064-834714' '(at4g17910 : 372.0) transferases, transferring acyl groups; FUNCTIONS IN: transferase activity, transferring acyl groups; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: GWT1 (InterPro:IPR009447); Has 62 Blast hits to 62 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 21; Plants - 15; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|34666 : 199.0) no description available & (gnl|cdd|35632 : 193.0) no description available & (reliability: 744.0) & (original description: Putative At4g17910, Description = Uncharacterized protein At4g17910, PFAM = PF06423)' T '20.1' 'stress.biotic' 'niben101scf03135_29112-33949' '(gnl|cdd|39857 : 286.0) no description available & (at1g58390 : 268.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, LP.08 eight leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58400.1); Has 14341 Blast hits to 13745 proteins in 491 species: Archae - 4; Bacteria - 531; Metazoa - 280; Fungi - 132; Plants - 13314; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|85132 : 159.0) no description available & (reliability: 506.0) & (original description: Putative PGSC0003DMG400013407, Description = , PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf03135_50744-55577' '(gnl|cdd|39857 : 314.0) no description available & (at1g53350 : 258.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|85132 : 238.0) no description available & (reliability: 488.0) & (original description: Putative PGSC0003DMG400007462, Description = NRC2a, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf03150_435587-441029' '(gnl|cdd|39857 : 258.0) no description available & (gnl|cdd|85132 : 237.0) no description available & (at1g53350 : 208.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative NBS391R, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf03223_17098-20573' '(at2g15490 : 363.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 205.0) no description available & (p56725|zox_phavu : 161.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 90.0) no description available & (reliability: 712.0) & (original description: Putative GmSGT2, Description = Soyasapogenol B glucuronide galactosyltransferase, PFAM = PF00201)' T '20.1' 'stress.biotic' 'niben101scf03262_60244-64598' '(gnl|cdd|39857 : 283.0) no description available & (gnl|cdd|85132 : 256.0) no description available & (at3g46530 : 219.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative SW5F, Description = Putative ovule protein, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf03385_86981-203918' '(at2g15220 : 294.0) Plant basic secretory protein (BSP) family protein; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, basic secretory protein (InterPro:IPR007541); BEST Arabidopsis thaliana protein match is: Plant basic secretory protein (BSP) family protein (TAIR:AT2G15130.1); Has 296 Blast hits to 296 proteins in 84 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi - 66; Plants - 170; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|68039 : 278.0) no description available & (reliability: 588.0) & (original description: Putative At2g15220, Description = At2g15220/F15A23.4, PFAM = PF04450)' T '20.1' 'stress.biotic' 'niben101scf03385_245897-249117' '(at2g15220 : 239.0) Plant basic secretory protein (BSP) family protein; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, basic secretory protein (InterPro:IPR007541); BEST Arabidopsis thaliana protein match is: Plant basic secretory protein (BSP) family protein (TAIR:AT2G15130.1); Has 296 Blast hits to 296 proteins in 84 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi - 66; Plants - 170; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|68039 : 217.0) no description available & (reliability: 478.0) & (original description: Putative At2g15130, Description = Plant basic secretory family protein, PFAM = PF04450)' T '20.1' 'stress.biotic' 'niben101scf03461_520893-525067' '(gnl|cdd|39857 : 261.0) no description available & (gnl|cdd|85132 : 254.0) no description available & (at3g46530 : 221.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative R1, Description = R1, PFAM = PF00931;PF12061;PF12061)' T '20.1' 'stress.biotic' 'niben101scf03479_647736-651580' '(at3g25070 : 94.0) Encodes a member of the R protein complex and may represent a virulence target of type III pili effector proteins (virulence factors) from bacterial pathogens, which is 'guarded' by R protein complex (RPM1 and RPS2 proteins). RIN4 physically interacts with RPS2 and RPM1 in vivo. Bacterial avirulence (Avr) effectors AvrB, AvrRpm1, and AvrRpt2 induce a mobility shift in RIN4 and expression of AvrRpt2 induces rapid degradation of RIN4. RIN4 contains 2 sites for AvrRpt2 autocleavage, called RCS1 and RCS2. Overexpression of RIN4 inhibits multiple phenotypes associated with AvrRpt2 function and also inhibits PAMP-induced defense signaling. Attached to the plasma membrane at its carboxyl terminus. Cleaved by AvrRpt2 at two PxFGxW motifs, one releasing a large portion of RIN4 from the plasma membrane and both exposing amino-terminal residues that destabilized the carboxyl-terminal cleavage products by targeting them for N-end ubiquitylation and proteasomal degradation. Major virulence target of the TTSE HopF2Pto.; RPM1 interacting protein 4 (RIN4); FUNCTIONS IN: protein binding; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: defense protein-related (TAIR:AT5G48657.2); Has 373 Blast hits to 371 proteins in 56 species: Archae - 0; Bacteria - 8; Metazoa - 13; Fungi - 2; Plants - 331; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative POPTR_0002s24680g, Description = RPM1-interacting protein 4, PFAM = PF05627)' T '20.1' 'stress.biotic' 'niben101scf03479_647918-654277' '(at3g25070 : 87.8) Encodes a member of the R protein complex and may represent a virulence target of type III pili effector proteins (virulence factors) from bacterial pathogens, which is 'guarded' by R protein complex (RPM1 and RPS2 proteins). RIN4 physically interacts with RPS2 and RPM1 in vivo. Bacterial avirulence (Avr) effectors AvrB, AvrRpm1, and AvrRpt2 induce a mobility shift in RIN4 and expression of AvrRpt2 induces rapid degradation of RIN4. RIN4 contains 2 sites for AvrRpt2 autocleavage, called RCS1 and RCS2. Overexpression of RIN4 inhibits multiple phenotypes associated with AvrRpt2 function and also inhibits PAMP-induced defense signaling. Attached to the plasma membrane at its carboxyl terminus. Cleaved by AvrRpt2 at two PxFGxW motifs, one releasing a large portion of RIN4 from the plasma membrane and both exposing amino-terminal residues that destabilized the carboxyl-terminal cleavage products by targeting them for N-end ubiquitylation and proteasomal degradation. Major virulence target of the TTSE HopF2Pto.; RPM1 interacting protein 4 (RIN4); FUNCTIONS IN: protein binding; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: defense protein-related (TAIR:AT5G48657.2); Has 373 Blast hits to 371 proteins in 56 species: Archae - 0; Bacteria - 8; Metazoa - 13; Fungi - 2; Plants - 331; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative POPTR_0002s24680g, Description = RPM1-interacting protein 4, PFAM = PF05627)' T '20.1' 'stress.biotic' 'niben101scf03631_121307-126633' '(at5g42340 : 650.0) Plant U-Box 15 (PUB15); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 13 (TAIR:AT3G46510.1); Has 7951 Blast hits to 5407 proteins in 313 species: Archae - 0; Bacteria - 45; Metazoa - 2582; Fungi - 655; Plants - 3768; Viruses - 3; Other Eukaryotes - 898 (source: NCBI BLink). & (q64ha9|spl11_orysa : 393.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 97.6) no description available & (reliability: 1300.0) & (original description: Putative PUB15, Description = U-box domain-containing protein 15, PFAM = PF00514;PF00514;PF04564)' T '20.1' 'stress.biotic' 'niben101scf03702_445663-456235' '(gnl|cdd|39857 : 312.0) no description available & (at5g35450 : 262.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 231.0) no description available & (reliability: 488.0) & (original description: Putative Prf, Description = PRF, PFAM = PF00931;PF12061)' T '20.1' 'stress.biotic' 'niben101scf03820_224534-227484' '(at1g75040 : 273.0) Thaumatin-like protein involved in response to pathogens. mRNA level of the PR-5 gene (At1g75040)is significantly changed after cutting the inflorescence stem indicating the existence of a network of signal transducing pathways as other stress-regulated genes (At5g01410, At3g17800, At1g29930)do not response to the treatment.; pathogenesis-related gene 5 (PR5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: apoplast, cell wall, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75050.1); Has 1613 Blast hits to 1588 proteins in 178 species: Archae - 0; Bacteria - 37; Metazoa - 56; Fungi - 84; Plants - 1422; Viruses - 4; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|47535 : 245.0) no description available & (p83332|tlp1_prupe : 189.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 546.0) & (original description: Putative At1g75040, Description = Pathogenesis-related protein 5, PFAM = PF00314)' T '20.1' 'stress.biotic' 'niben101scf03893_370308-373249' '(gnl|cdd|84754 : 139.0) no description available & (at1g70890 : 90.5) MLP-like protein 43 (MLP43); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.5); Has 440 Blast hits to 408 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 440; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative orf, Description = Orf protein, PFAM = PF00407)' T '20.1' 'stress.biotic' 'niben101scf03905_164939-167349' '(gnl|cdd|66675 : 99.0) no description available & (at1g22900 : 89.4) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT5G42500.1); Has 955 Blast hits to 954 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 955; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative , Description = Disease resistance-responsive, dirigent domain protein, PFAM = PF03018)' T '20.1' 'stress.biotic' 'niben101scf03934_455057-462723' '(gnl|cdd|39857 : 281.0) no description available & (gnl|cdd|85132 : 242.0) no description available & (at1g50180 : 201.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative help3, Description = Hero resistance protein 3 homologue, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf03937_260048-263715' '(at1g77700 : 330.0) Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: thaumatin-like protein 3 (TAIR:AT1G75030.1); Has 1591 Blast hits to 1571 proteins in 178 species: Archae - 0; Bacteria - 39; Metazoa - 54; Fungi - 86; Plants - 1401; Viruses - 2; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|47535 : 230.0) no description available & (q9fsg7|tp1a_maldo : 175.0) Thaumatin-like protein 1a precursor (Allergen Mal d 2) (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 660.0) & (original description: Putative BFTP, Description = Thaumatin-like protein, PFAM = PF00314)' T '20.1' 'stress.biotic' 'niben101scf03949_50308-53886' '(p29059|chi3_tobac : 541.0) Endochitinase 3 precursor (EC 3.2.1.14) - Nicotiana tabacum (Common tobacco) & (at3g12500 : 402.0) encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses.; basic chitinase (HCHIB); FUNCTIONS IN: chitinase activity; INVOLVED IN: response to cadmium ion, defense response to fungus, jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT4G01700.1); Has 2944 Blast hits to 2653 proteins in 549 species: Archae - 0; Bacteria - 615; Metazoa - 38; Fungi - 228; Plants - 1922; Viruses - 10; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|84590 : 402.0) no description available & (gnl|cdd|39939 : 264.0) no description available & (reliability: 804.0) & (original description: Putative CHN14, Description = Endochitinase 3, PFAM = PF00187;PF00182)' T '20.1' 'stress.biotic' 'niben101scf03959_64470-69140' '(gnl|cdd|39857 : 264.0) no description available & (gnl|cdd|85132 : 216.0) no description available & (at5g35450 : 204.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative R1, Description = R1, PFAM = PF00931;PF12061)' T '20.1' 'stress.biotic' 'niben101scf04053_214372-216908' '(p11670|prb1_tobac : 307.0) Basic form of pathogenesis-related protein 1 precursor (PRP 1) - Nicotiana tabacum (Common tobacco) & (at4g33720 : 202.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: basic pathogenesis-related protein 1 (TAIR:AT2G14580.1); Has 3131 Blast hits to 3024 proteins in 381 species: Archae - 0; Bacteria - 70; Metazoa - 1690; Fungi - 339; Plants - 919; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|29108 : 161.0) no description available & (gnl|cdd|38227 : 121.0) no description available & (reliability: 404.0) & (original description: Putative pr1b, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T '20.1' 'stress.biotic' 'niben101scf04053_251966-254283' '(p11670|prb1_tobac : 177.0) Basic form of pathogenesis-related protein 1 precursor (PRP 1) - Nicotiana tabacum (Common tobacco) & (at2g14610 : 169.0) PR1 gene expression is induced in response to a variety of pathogens. It is a useful molecular marker for the SAR response. Though the Genbank record for the cDNA associated to this gene is called 'PR-1-like', the sequence actually corresponds to PR1. Expression of this gene is salicylic-acid responsive.; pathogenesis-related gene 1 (PR1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to vitamin B1, response to jasmonic acid stimulus, systemic acquired resistance, defense response; LOCATED IN: extracellular region, cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: basic pathogenesis-related protein 1 (TAIR:AT2G14580.1); Has 3124 Blast hits to 3017 proteins in 378 species: Archae - 0; Bacteria - 64; Metazoa - 1706; Fungi - 335; Plants - 914; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|29108 : 138.0) no description available & (gnl|cdd|38227 : 118.0) no description available & (reliability: 338.0) & (original description: Putative PR1, Description = Pathogenesis-related protein1, PFAM = PF00188)' T '20.1' 'stress.biotic' 'niben101scf04223_78416-97107' '(at4g38670 : 362.0) Pathogenesis-related thaumatin superfamily protein; INVOLVED IN: response to other organism; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT4G36010.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47535 : 242.0) no description available & (p83332|tlp1_prupe : 234.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 724.0) & (original description: Putative PR5, Description = Pathogenesis-related thaumatin family protein, PFAM = PF00314)' T '20.1' 'stress.biotic' 'niben101scf04223_215227-217790' '(at2g21100 : 140.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G65870.1); Has 857 Blast hits to 856 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 111.0) no description available & (reliability: 266.0) & (original description: Putative DIR, Description = Plant disease resistance response protein, PFAM = PF03018)' T '20.1' 'stress.biotic' 'niben101scf04403_204534-217531' '(gnl|cdd|85132 : 215.0) no description available & (gnl|cdd|39857 : 207.0) no description available & (at1g50180 : 187.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative RGA86, Description = NBS-coding resistance protein, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf04563_198056-201601' '(o65740|def2_capan : 92.4) Defensin J1-2 precursor - Capsicum annuum (Bell pepper) & (at2g02100 : 82.8) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.; low-molecular-weight cysteine-rich 69 (LCR69); FUNCTIONS IN: peptidase inhibitor activity; INVOLVED IN: defense response; LOCATED IN: plasma membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gamma thionin (InterPro:IPR008176), Knottin (InterPro:IPR003614), Gamma Purothionin (InterPro:IPR008177); BEST Arabidopsis thaliana protein match is: low-molecular-weight cysteine-rich 68 (TAIR:AT2G02130.1); Has 400 Blast hits to 400 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 400; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative def7, Description = Defensin, PFAM = PF00304)' T '20.1' 'stress.biotic' 'niben101scf04636_4120-6668' '(at3g03480 : 81.3) acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase (CHAT); CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G17540.1); Has 2522 Blast hits to 2511 proteins in 130 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 44; Plants - 2476; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative , Description = , PFAM = PF02458)' T '20.1' 'stress.biotic' 'niben101scf04644_69838-73151' '(at3g54420 : 327.0) encodes an EP3 chitinase that is expressed during somatic embryogenesis in 'nursing' cells surrounding the embryos but not in embryos themselves. The gene is also expressed in mature pollen and growing pollen tubes until they enter the receptive synergid, but not in endosperm and integuments as in carrot. Post-embryonically, expression is found in hydathodes, stipules, root epidermis and emerging root hairs.; homolog of carrot EP3-3 chitinase (EP3); FUNCTIONS IN: chitinase activity; INVOLVED IN: somatic embryogenesis, plant-type hypersensitive response; LOCATED IN: cell wall; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT2G43590.1); Has 2660 Blast hits to 2432 proteins in 504 species: Archae - 0; Bacteria - 547; Metazoa - 34; Fungi - 178; Plants - 1776; Viruses - 22; Other Eukaryotes - 103 (source: NCBI BLink). & (p27054|chi4_phavu : 307.0) Endochitinase PR4 precursor (EC 3.2.1.14) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|29557 : 263.0) no description available & (gnl|cdd|39939 : 230.0) no description available & (reliability: 654.0) & (original description: Putative EP3, Description = Endochitinase EP3, PFAM = PF00187;PF00182)' T '20.1' 'stress.biotic' 'niben101scf04664_299578-310677' '(at2g21340 : 632.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G39030.1); Has 7873 Blast hits to 7863 proteins in 1757 species: Archae - 156; Bacteria - 6520; Metazoa - 33; Fungi - 48; Plants - 395; Viruses - 0; Other Eukaryotes - 721 (source: NCBI BLink). & (gnl|cdd|30880 : 141.0) no description available & (gnl|cdd|36561 : 122.0) no description available & (reliability: 1264.0) & (original description: Putative DTX46, Description = Protein DETOXIFICATION 46, chloroplastic, PFAM = PF01554)' T '20.1' 'stress.biotic' 'niben101scf04845_128320-135281' '(gnl|cdd|39857 : 273.0) no description available & (at1g50180 : 238.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|85132 : 230.0) no description available & (reliability: 476.0) & (original description: Putative NBS390, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf04875_238020-242096' '(at2g36780 : 572.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 238.0) no description available & (p56725|zox_phavu : 165.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 80.8) no description available & (reliability: 1122.0) & (original description: Putative UGT73C3, Description = UDP-glycosyltransferase 73C3, PFAM = PF00201)' T '20.1' 'stress.biotic' 'niben101scf05005_210756-213370' '(gnl|cdd|70773 : 135.0) no description available & (at5g06320 : 128.0) encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus, spermine and Pseudomonas syringae pv. tomato DC3000. The gene product is localized to the plasma membrane.; NDR1/HIN1-like 3 (NHL3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response to virus, defense response to bacterium, response to bacterium; LOCATED IN: plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: NDR1/HIN1-like 2 (TAIR:AT3G11650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative hin9, Description = Harpin inducing protein 1-like 9, PFAM = PF03168)' T '20.1' 'stress.biotic' 'niben101scf05109_284921-329909' '(at5g36930 : 161.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85544 : 128.0) no description available & (reliability: 308.0) & (original description: Putative nl25, Description = TIR-NBS disease resistance-like protein, PFAM = PF01582)' T '20.1' 'stress.biotic' 'niben101scf05177_365946-370540' '(at3g46530 : 434.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|39857 : 430.0) no description available & (gnl|cdd|85132 : 255.0) no description available & (reliability: 868.0) & (original description: Putative RPP13, Description = Disease resistance protein RPP13 variant, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf05226_309812-314896' '(at5g42340 : 579.0) Plant U-Box 15 (PUB15); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 13 (TAIR:AT3G46510.1); Has 7951 Blast hits to 5407 proteins in 313 species: Archae - 0; Bacteria - 45; Metazoa - 2582; Fungi - 655; Plants - 3768; Viruses - 3; Other Eukaryotes - 898 (source: NCBI BLink). & (q64ha9|spl11_orysa : 348.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 88.8) no description available & (reliability: 1158.0) & (original description: Putative PUB15, Description = U-box domain-containing protein 15, PFAM = PF00514;PF00514;PF04564)' T '20.1' 'stress.biotic' 'niben101scf05300_30633-45160' '(at2g21340 : 609.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G39030.1); Has 7873 Blast hits to 7863 proteins in 1757 species: Archae - 156; Bacteria - 6520; Metazoa - 33; Fungi - 48; Plants - 395; Viruses - 0; Other Eukaryotes - 721 (source: NCBI BLink). & (gnl|cdd|30880 : 154.0) no description available & (gnl|cdd|36561 : 113.0) no description available & (reliability: 1218.0) & (original description: Putative DTX46, Description = Protein DETOXIFICATION 46, chloroplastic, PFAM = PF01554)' T '20.1' 'stress.biotic' 'niben101scf05306_263311-266536' '(at3g09590 : 111.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G02730.1); Has 3024 Blast hits to 2931 proteins in 377 species: Archae - 0; Bacteria - 64; Metazoa - 1633; Fungi - 327; Plants - 888; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (p07053|pr1b_tobac : 93.6) Pathogenesis-related protein 1B precursor (PR-1B) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|38227 : 91.9) no description available & (gnl|cdd|47528 : 88.9) no description available & (reliability: 222.0) & (original description: Putative At3g09590, Description = BnaC03g35900D protein, PFAM = PF00188)' T '20.1' 'stress.biotic' 'niben101scf05405_242661-245079' '(at5g63660 : 81.6) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.; PDF2.5; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, root, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Gamma thionin (InterPro:IPR008176), Knottin (InterPro:IPR003614), Gamma Purothionin (InterPro:IPR008177); BEST Arabidopsis thaliana protein match is: low-molecular-weight cysteine-rich 68 (TAIR:AT2G02130.1); Has 396 Blast hits to 396 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative DEF1, Description = Scorpion toxin-like knottin superfamily protein, PFAM = PF00304)' T '20.1' 'stress.biotic' 'niben101scf05554_556781-560957' '(at1g77700 : 380.0) Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: thaumatin-like protein 3 (TAIR:AT1G75030.1); Has 1591 Blast hits to 1571 proteins in 178 species: Archae - 0; Bacteria - 39; Metazoa - 54; Fungi - 86; Plants - 1401; Viruses - 2; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|47535 : 256.0) no description available & (p33679|zeam_maize : 187.0) Zeamatin precursor - Zea mays (Maize) & (reliability: 760.0) & (original description: Putative BnaCnng11310D, Description = BnaCnng11310D protein, PFAM = PF00314)' T '20.1' 'stress.biotic' 'niben101scf05566_208921-237684' '(at3g07040 : 333.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (gnl|cdd|39857 : 293.0) no description available & (gnl|cdd|85132 : 200.0) no description available & (reliability: 666.0) & (original description: Putative PGSC0003DMG400044423, Description = NBS resistance protein RGA49, PFAM = PF13855;PF00931)' T '20.1' 'stress.biotic' 'niben101scf05566_231037-237144' '(gnl|cdd|39857 : 195.0) no description available & (gnl|cdd|85132 : 187.0) no description available & (at3g07040 : 171.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative PGSC0003DMG400025259, Description = NBS resistance protein RGA49, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf05617_135063-142901' '(at1g20780 : 217.0) Encodes a protein containing a U-box and an ARM domain.; senescence-associated E3 ubiquitin ligase 1 (SAUL1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of chlorophyll catabolic process, regulation of chlorophyll biosynthetic process, leaf senescence, regulation of abscisic acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G76390.2); Has 2790 Blast hits to 2660 proteins in 201 species: Archae - 0; Bacteria - 20; Metazoa - 434; Fungi - 161; Plants - 1969; Viruses - 3; Other Eukaryotes - 203 (source: NCBI BLink). & (gnl|cdd|47808 : 85.3) no description available & (reliability: 434.0) & (original description: Putative glysoja_015640, Description = U-box domain-containing protein 43, PFAM = PF05659;PF04564)' T '20.1' 'stress.biotic' 'niben101scf05629_24917-27863' '(at5g02140 : 285.0) Pathogenesis-related thaumatin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G18250.2); Has 1588 Blast hits to 1558 proteins in 178 species: Archae - 0; Bacteria - 37; Metazoa - 56; Fungi - 96; Plants - 1388; Viruses - 2; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|47535 : 227.0) no description available & (p83332|tlp1_prupe : 177.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 570.0) & (original description: Putative pco079405, Description = Thaumatin-like protein, PFAM = PF00314)' T '20.1' 'stress.biotic' 'niben101scf05678_123120-131187' '(at5g15870 : 898.0) glycosyl hydrolase family 81 protein; FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, endo-1,3(4)-beta-glucanase activity; INVOLVED IN: response to cyclopentenone; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 81 (InterPro:IPR005200); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 81 protein (TAIR:AT1G18310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67267 : 659.0) no description available & (gnl|cdd|37465 : 615.0) no description available & (reliability: 1796.0) & (original description: Putative GBP1, Description = Beta-glucan-binding protein, PFAM = PF03639)' T '20.1' 'stress.biotic' 'niben101scf05955_26105-31740' '(at1g20780 : 141.0) Encodes a protein containing a U-box and an ARM domain.; senescence-associated E3 ubiquitin ligase 1 (SAUL1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of chlorophyll catabolic process, regulation of chlorophyll biosynthetic process, leaf senescence, regulation of abscisic acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G76390.2); Has 2790 Blast hits to 2660 proteins in 201 species: Archae - 0; Bacteria - 20; Metazoa - 434; Fungi - 161; Plants - 1969; Viruses - 3; Other Eukaryotes - 203 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative Sb03g045700, Description = Putative uncharacterized protein Sb03g045700, PFAM = PF05804)' T '20.1' 'stress.biotic' 'niben101scf05956_148540-153357' '(gnl|cdd|36842 : 304.0) no description available & (at5g47120 : 293.0) Encodes BI-1, a homolog of mammalian Bax inhibitor 1. Functions as an attenuator of biotic and abiotic types of cell death. Bax-induced cell death can be downregulated by ectopically expressing AtBI in planta.; BAX inhibitor 1 (BI1); CONTAINS InterPro DOMAIN/s: Inhibitor of apoptosis-promoting Bax1 related (InterPro:IPR006214), Bax inhibitor 1, conserved site (InterPro:IPR006213); BEST Arabidopsis thaliana protein match is: Bax inhibitor-1 family protein (TAIR:AT4G17580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9mbd8|bi1_orysa : 251.0) Bax inhibitor 1 (BI-1) (OsBI-1) - Oryza sativa (Rice) & (gnl|cdd|85194 : 93.7) no description available & (reliability: 586.0) & (original description: Putative tegt, Description = Bax inhibitor 1, PFAM = PF01027)' T '20.1' 'stress.biotic' 'niben101scf06059_165561-169252' '(gnl|cdd|39857 : 274.0) no description available & (at1g50180 : 247.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|85132 : 247.0) no description available & (reliability: 458.0) & (original description: Putative NBS390, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf06133_112822-133715' '(gnl|cdd|69947 : 452.0) no description available & (at2g02180 : 385.0) Necessary for the efficient multiplication of tobamoviruses.; tobamovirus multiplication protein 3 (TOM3); INVOLVED IN: viral replication complex formation and maintenance; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1084) (TAIR:AT1G14530.2); Has 262 Blast hits to 261 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 770.0) & (original description: Putative TOM3, Description = Tobamovirus multiplication protein 3, PFAM = PF06454)' T '20.1' 'stress.biotic' 'niben101scf06218_359927-370791' '(at1g20030 : 342.0) Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47535 : 248.0) no description available & (p83332|tlp1_prupe : 239.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 684.0) & (original description: Putative TLP3, Description = Thaumatin-like protein 3, PFAM = PF00314)' T '20.1' 'stress.biotic' 'niben101scf06218_453606-458572' '(at4g24180 : 318.0) Root-specific expression activated in response to rhizobacteria and ACC. Role in induced systemic resistance.; THAUMATIN-LIKE PROTEIN 1 (TLP1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to ethylene stimulus, response to other organism, induced systemic resistance, response to bacterium; LOCATED IN: endomembrane system; EXPRESSED IN: root vascular system; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT4G38660.1); Has 1607 Blast hits to 1581 proteins in 180 species: Archae - 0; Bacteria - 47; Metazoa - 54; Fungi - 78; Plants - 1413; Viruses - 3; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|47535 : 256.0) no description available & (p83332|tlp1_prupe : 220.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 636.0) & (original description: Putative PR5, Description = Pathogenesis-related protein 5, PFAM = PF00314)' T '20.1' 'stress.biotic' 'niben101scf06305_523347-527445' '(at1g64140 : 510.0) BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 3596 Blast hits to 2004 proteins in 150 species: Archae - 0; Bacteria - 54; Metazoa - 1597; Fungi - 38; Plants - 513; Viruses - 9; Other Eukaryotes - 1385 (source: NCBI BLink). & (reliability: 1020.0) & (original description: Putative WRKY19, Description = BnaC09g06380D protein, PFAM = )' T '20.1' 'stress.biotic' 'niben101scf06347_190640-195390' '(gnl|cdd|39857 : 292.0) no description available & (gnl|cdd|85132 : 239.0) no description available & (at1g53350 : 205.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative rx, Description = Rx protein, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf06347_192215-195405' '(gnl|cdd|85132 : 193.0) no description available & (gnl|cdd|39857 : 178.0) no description available & (at3g46530 : 124.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative RGA90, Description = NBS-coding resistance protein, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf06473_18941-39970' '(gnl|cdd|39857 : 314.0) no description available & (at3g46730 : 250.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46530.1); Has 14658 Blast hits to 14197 proteins in 483 species: Archae - 6; Bacteria - 489; Metazoa - 440; Fungi - 102; Plants - 13534; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|85132 : 249.0) no description available & (reliability: 478.0) & (original description: Putative GPA2, Description = Disease resistance protein RGH5, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf06553_12240-56028' '(gnl|cdd|39857 : 301.0) no description available & (gnl|cdd|85132 : 235.0) no description available & (at3g46530 : 199.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative NBS209, Description = NBS-coding resistance gene analog, PFAM = PF01419;PF01419;PF01419;PF00931)' T '20.1' 'stress.biotic' 'niben101scf06570_460134-463945' '(at1g78780 : 154.0) pathogenesis-related family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 197 Blast hits to 196 proteins in 67 species: Archae - 0; Bacteria - 51; Metazoa - 15; Fungi - 36; Plants - 93; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (p16273|prpx_horvu : 146.0) Pathogen-related protein - Hordeum vulgare (Barley) & (reliability: 308.0) & (original description: Putative , Description = Pathogen-related protein, PFAM = )' T '20.1' 'stress.biotic' 'niben101scf06720_216736-221502' '(at3g48080 : 434.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: lipase activity, triglyceride lipase activity, signal transducer activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48090.1); Has 522 Blast hits to 472 proteins in 44 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 2; Plants - 484; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 868.0) & (original description: Putative EDS1, Description = Protein EDS1, PFAM = PF01764)' T '20.1' 'stress.biotic' 'niben101scf06809_159204-163275' '(at2g36760 : 513.0) UDP-glucosyl transferase 73C2 (UGT73C2); FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: flower, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7948 Blast hits to 7837 proteins in 437 species: Archae - 0; Bacteria - 325; Metazoa - 2303; Fungi - 35; Plants - 5121; Viruses - 97; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36406 : 258.0) no description available & (p56725|zox_phavu : 150.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 81.5) no description available & (reliability: 1006.0) & (original description: Putative UGT73C2, Description = UDP-glycosyltransferase 73C2, PFAM = PF00201)' T '20.1' 'stress.biotic' 'niben101scf06848_752059-755105' '(at5g17680 : 115.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85544 : 90.4) no description available & (reliability: 208.0) & (original description: Putative CN, Description = N-like protein, PFAM = PF01582)' T '20.1' 'stress.biotic' 'niben101scf07096_128938-132296' '(gnl|cdd|84754 : 148.0) no description available & (at1g70850 : 122.0) MLP-like protein 34 (MLP34); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative orf, Description = Orf protein, PFAM = PF00407)' T '20.1' 'stress.biotic' 'niben101scf07169_115388-118197' '(at3g49750 : 305.0) receptor like protein 44 (RLP44); INVOLVED IN: signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 57 (TAIR:AT5G65830.1); Has 65414 Blast hits to 15809 proteins in 634 species: Archae - 17; Bacteria - 2183; Metazoa - 2191; Fungi - 213; Plants - 57499; Viruses - 0; Other Eukaryotes - 3311 (source: NCBI BLink). & (reliability: 610.0) & (original description: Putative RLP57, Description = At5g65830, PFAM = PF13855)' T '20.1' 'stress.biotic' 'niben101scf07298_9470-11026' '(gnl|cdd|85132 : 154.0) no description available & (gnl|cdd|39857 : 138.0) no description available & (at3g46530 : 110.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative hero, Description = Putative ovule protein, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf07451_83944-87557' '(at1g73620 : 352.0) Pathogenesis-related thaumatin superfamily protein; INVOLVED IN: response to other organism; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G18250.1); Has 1554 Blast hits to 1550 proteins in 171 species: Archae - 0; Bacteria - 25; Metazoa - 54; Fungi - 76; Plants - 1392; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|47535 : 278.0) no description available & (p83332|tlp1_prupe : 214.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 704.0) & (original description: Putative At1g18250, Description = Thaumatin-like protein, PFAM = PF00314)' T '20.1' 'stress.biotic' 'niben101scf07488_11575-17792' '(gnl|cdd|39857 : 395.0) no description available & (at4g26090 : 296.0) Encodes a plasma membrane protein with leucine-rich repeat, leucine zipper, and P loop domains that confers resistance to Pseudomonas syringae infection by interacting with the avirulence gene avrRpt2. RPS2 protein interacts directly with plasma membrane associated protein RIN4 and this interaction is disrupted by avrRpt2.; RESISTANT TO P. SYRINGAE 2 (RPS2); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: RPS5-like 1 (TAIR:AT1G12210.1); Has 21906 Blast hits to 18242 proteins in 683 species: Archae - 18; Bacteria - 1169; Metazoa - 4701; Fungi - 258; Plants - 15223; Viruses - 0; Other Eukaryotes - 537 (source: NCBI BLink). & (gnl|cdd|85132 : 208.0) no description available & (reliability: 592.0) & (original description: Putative PGSC0003DMG400013736, Description = , PFAM = PF13855;PF00931)' T '20.1' 'stress.biotic' 'niben101scf07491_45913-48718' '(p08252|chi1_tobac : 568.0) Endochitinase A precursor (EC 3.2.1.14) (CHN-A) - Nicotiana tabacum (Common tobacco) & (at3g12500 : 434.0) encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses.; basic chitinase (HCHIB); FUNCTIONS IN: chitinase activity; INVOLVED IN: response to cadmium ion, defense response to fungus, jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT4G01700.1); Has 2944 Blast hits to 2653 proteins in 549 species: Archae - 0; Bacteria - 615; Metazoa - 38; Fungi - 228; Plants - 1922; Viruses - 10; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|84590 : 412.0) no description available & (gnl|cdd|39939 : 272.0) no description available & (reliability: 868.0) & (original description: Putative CHN50, Description = Endochitinase B, PFAM = PF00182;PF00187)' T '20.1' 'stress.biotic' 'niben101scf07817_291879-294601' '(gnl|cdd|86681 : 144.0) no description available & (at1g33900 : 139.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: response to bacterium; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G33930.1); Has 1258 Blast hits to 1107 proteins in 117 species: Archae - 0; Bacteria - 93; Metazoa - 786; Fungi - 6; Plants - 257; Viruses - 8; Other Eukaryotes - 108 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative AIG1, Description = AIG1-like protein, PFAM = PF04548)' T '20.1' 'stress.biotic' 'niben101scf07926_416831-423500' '(p14232|tga1a_tobac : 498.0) TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a) (ASF-1 protein) - Nicotiana tabacum (Common tobacco) & (at5g65210 : 391.0) Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.; TGA1; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 4 (TAIR:AT5G10030.2); Has 674 Blast hits to 672 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 649; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 782.0) & (original description: Putative TGA1A, Description = TGACG-sequence-specific DNA-binding protein TGA-1A, PFAM = PF00170;PF14144)' T '20.1' 'stress.biotic' 'niben101scf08006_139457-145297' '(gnl|cdd|39857 : 271.0) no description available & (gnl|cdd|85132 : 242.0) no description available & (at5g48620 : 232.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative R1A, Description = Late blight resistance protein R1-A, PFAM = PF12061;PF00931)' T '20.1' 'stress.biotic' 'niben101scf08020_650930-653616' '(at2g35980 : 190.0) Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus, spermine and during senescence. The gene product is localized to the chloroplast.; YELLOW-LEAF-SPECIFIC GENE 9 (YLS9); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response to virus, leaf senescence, response to other organism; LOCATED IN: chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: NDR1/HIN1-like 2 (TAIR:AT3G11650.1); Has 1046 Blast hits to 1046 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1046; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 159.0) no description available & (reliability: 352.0) & (original description: Putative hin1, Description = Harpin inducing protein, PFAM = PF03168)' T '20.1' 'stress.biotic' 'niben101scf08447_261110-263721' '(gnl|cdd|84754 : 162.0) no description available & (at1g70840 : 144.0) MLP-like protein 31 (MLP31); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.3); Has 485 Blast hits to 453 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 485; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative MLP31, Description = MLP-like protein 31, PFAM = PF00407)' T '20.1' 'stress.biotic' 'niben101scf08519_334208-343575' '(gnl|cdd|69947 : 393.0) no description available & (at2g02180 : 306.0) Necessary for the efficient multiplication of tobamoviruses.; tobamovirus multiplication protein 3 (TOM3); INVOLVED IN: viral replication complex formation and maintenance; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1084) (TAIR:AT1G14530.2); Has 262 Blast hits to 261 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 612.0) & (original description: Putative TOM3, Description = Tobamovirus multiplication protein 3, PFAM = PF06454)' T '20.1' 'stress.biotic' 'niben101scf08597_247316-252105' '(gnl|cdd|39857 : 334.0) no description available & (at3g46530 : 268.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|85132 : 252.0) no description available & (reliability: 536.0) & (original description: Putative PGSC0003DMG400013891, Description = Putative ovule protein, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf08670_40900-47603' '(at4g18470 : 324.0) Negative regulator of systemic acquired resistance (SAR), repressor of pathogenesis-related PR gene expression which is removed by NPR1 upon induction of SAR. Encodes leucine-rich nuclear protein. Conserved in plants, with putative orthologs found in several plant species. Many NPR1-dependent PR gene are specifically derepressed in the sni1 mutant. The structural similarity of SNI1 to Armadillo repeat proteins implies that SNI1 may form a scaffold for interaction with proteins that modulate transcription. Histone modification may be involved in SNI1-mediated repression of PR genes.; SUPPRESSOR OF NPR1-1, INDUCIBLE 1 (SNI1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 648.0) & (original description: Putative SNI1, Description = At4g18470, PFAM = )' T '20.1' 'stress.biotic' 'niben101scf08698_190710-194352' '(gnl|cdd|39857 : 288.0) no description available & (gnl|cdd|85132 : 228.0) no description available & (at1g59780 : 219.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root, flower, synergid; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58400.1); Has 16454 Blast hits to 15209 proteins in 528 species: Archae - 16; Bacteria - 828; Metazoa - 1085; Fungi - 125; Plants - 14178; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink). & (reliability: 434.0) & (original description: Putative PGSC0003DMG400021169, Description = , PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf08723_258097-263085' '(at4g36010 : 306.0) Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT2G17860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47535 : 245.0) no description available & (p83332|tlp1_prupe : 231.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 612.0) & (original description: Putative TL1, Description = Thaumatin-like protein, PFAM = PF00314)' T '20.1' 'stress.biotic' 'niben101scf08773_66401-71803' '(at3g18165 : 306.0) Encodes MOS4 (Modifier of snc1, 4), a nuclear protein homologous to human Breast Cancer-Amplified Sequence (BCAS2). MOS4 interacts with AtCDC5 and PRL1. All three proteins are essential for plant innate immunity.; Modifier of snc1,4 (MOS4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response signaling pathway, resistance gene-independent, defense response signaling pathway, resistance gene-dependent, defense response to bacterium, defense response to fungus; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Breast carcinoma amplified sequence 2 (InterPro:IPR008409); Has 346 Blast hits to 346 proteins in 142 species: Archae - 0; Bacteria - 2; Metazoa - 155; Fungi - 78; Plants - 42; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|69236 : 248.0) no description available & (gnl|cdd|38306 : 204.0) no description available & (reliability: 612.0) & (original description: Putative MOS4, Description = Pre-mRNA-splicing factor SPF27 homolog, PFAM = PF05700)' T '20.1' 'stress.biotic' 'niben101scf08973_20694-26934' '(p14232|tga1a_tobac : 631.0) TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a) (ASF-1 protein) - Nicotiana tabacum (Common tobacco) & (at5g65210 : 424.0) Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.; TGA1; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 4 (TAIR:AT5G10030.2); Has 674 Blast hits to 672 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 649; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 848.0) & (original description: Putative TGA1A, Description = TGACG-sequence-specific DNA-binding protein TGA-1A, PFAM = PF14144;PF00170)' T '20.1' 'stress.biotic' 'niben101scf09442_136968-140988' '(gnl|cdd|84590 : 359.0) no description available & (p29059|chi3_tobac : 344.0) Endochitinase 3 precursor (EC 3.2.1.14) - Nicotiana tabacum (Common tobacco) & (at3g12500 : 322.0) encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses.; basic chitinase (HCHIB); FUNCTIONS IN: chitinase activity; INVOLVED IN: response to cadmium ion, defense response to fungus, jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT4G01700.1); Has 2944 Blast hits to 2653 proteins in 549 species: Archae - 0; Bacteria - 615; Metazoa - 38; Fungi - 228; Plants - 1922; Viruses - 10; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|39939 : 241.0) no description available & (reliability: 644.0) & (original description: Putative chi1, Description = Chitinase, PFAM = PF00182)' T '20.1' 'stress.biotic' 'niben101scf09455_133796-136473' '(at3g09590 : 132.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G02730.1); Has 3024 Blast hits to 2931 proteins in 377 species: Archae - 0; Bacteria - 64; Metazoa - 1633; Fungi - 327; Plants - 888; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (q00008|prms_maize : 127.0) Pathogenesis-related protein PRMS precursor - Zea mays (Maize) & (gnl|cdd|29108 : 121.0) no description available & (gnl|cdd|38227 : 109.0) no description available & (reliability: 264.0) & (original description: Putative PGSC0003DMG400023936, Description = BnaC03g35900D protein, PFAM = PF00188)' T '20.1' 'stress.biotic' 'niben101scf09716_255000-267644' '(gnl|cdd|39857 : 368.0) no description available & (at5g35450 : 259.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 247.0) no description available & (reliability: 504.0) & (original description: Putative PGSC0003DMG400007462, Description = NRC2a, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf09976_56683-60951' '(at4g11220 : 304.0) VIRB2-interacting protein 2 (BTI2); INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 1 (TAIR:AT4G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37003 : 249.0) no description available & (gnl|cdd|66169 : 232.0) no description available & (reliability: 596.0) & (original description: Putative RTNLB2, Description = Reticulon-like protein B2, PFAM = PF02453)' T '20.1' 'stress.biotic' 'niben101scf10441_89565-93978' '(at5g17540 : 366.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase (TAIR:AT3G03480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 324.0) no description available & (o24645|hcbt1_diaca : 151.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 732.0) & (original description: Putative AMAT, Description = Methanol O-anthraniloyltransferase, PFAM = PF02458)' T '20.1' 'stress.biotic' 'niben101scf10566_10520-15005' '(at1g27620 : 582.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: synergid, pollen tube; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT2G40230.1); Has 2626 Blast hits to 2616 proteins in 147 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 66; Plants - 2554; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|66174 : 240.0) no description available & (o24645|hcbt1_diaca : 155.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1164.0) & (original description: Putative BnaA09g27830D, Description = BnaA09g27830D protein, PFAM = PF02458)' T '20.1' 'stress.biotic' 'niben101scf10767_459096-486067' '(gnl|cdd|39857 : 309.0) no description available & (at1g53350 : 272.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|85132 : 222.0) no description available & (reliability: 526.0) & (original description: Putative RGA88, Description = NBS-coding resistance protein, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf11110_92669-106018' '(p16273|prpx_horvu : 229.0) Pathogen-related protein - Hordeum vulgare (Barley) & (at1g78780 : 219.0) pathogenesis-related family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 197 Blast hits to 196 proteins in 67 species: Archae - 0; Bacteria - 51; Metazoa - 15; Fungi - 36; Plants - 93; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative , Description = Pathogen-related protein, PFAM = )' T '20.1' 'stress.biotic' 'niben101scf11169_103964-106838' '(at5g02140 : 339.0) Pathogenesis-related thaumatin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G18250.2); Has 1588 Blast hits to 1558 proteins in 178 species: Archae - 0; Bacteria - 37; Metazoa - 56; Fungi - 96; Plants - 1388; Viruses - 2; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|47535 : 232.0) no description available & (p83332|tlp1_prupe : 194.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 678.0) & (original description: Putative Os11g0706600, Description = Thaumatin-like protein, PFAM = PF00314)' T '20.1' 'stress.biotic' 'niben101scf11214_100610-104640' '(gnl|cdd|47913 : 251.0) no description available & (at4g19810 : 241.0) Glycosyl hydrolase family protein with chitinase insertion domain; FUNCTIONS IN: cation binding, chitinase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Chitinase II (InterPro:IPR011583), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein with chitinase insertion domain (TAIR:AT4G19820.1); Has 6461 Blast hits to 6286 proteins in 1137 species: Archae - 29; Bacteria - 2687; Metazoa - 1798; Fungi - 1311; Plants - 165; Viruses - 109; Other Eukaryotes - 362 (source: NCBI BLink). & (gnl|cdd|38017 : 216.0) no description available & (reliability: 482.0) & (original description: Putative chit5, Description = Putative class 5 chitinase, PFAM = PF00704)' T '20.1' 'stress.biotic' 'niben101scf11232_190910-195009' '(at5g15870 : 740.0) glycosyl hydrolase family 81 protein; FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, endo-1,3(4)-beta-glucanase activity; INVOLVED IN: response to cyclopentenone; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 81 (InterPro:IPR005200); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 81 protein (TAIR:AT1G18310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67267 : 539.0) no description available & (gnl|cdd|37465 : 497.0) no description available & (reliability: 1480.0) & (original description: Putative glu2, Description = Beta-1,3-glucanase 2, PFAM = PF03639)' T '20.1' 'stress.biotic' 'niben101scf11232_214331-218496' '(at5g15870 : 899.0) glycosyl hydrolase family 81 protein; FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, endo-1,3(4)-beta-glucanase activity; INVOLVED IN: response to cyclopentenone; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 81 (InterPro:IPR005200); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 81 protein (TAIR:AT1G18310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67267 : 661.0) no description available & (gnl|cdd|37465 : 633.0) no description available & (reliability: 1798.0) & (original description: Putative gbp, Description = Glycoside hydrolase family 81 protein, PFAM = PF03639)' T '20.1' 'stress.biotic' 'niben101scf11283_70239-73353' '(gnl|cdd|84754 : 119.0) no description available & (at1g70840 : 102.0) MLP-like protein 31 (MLP31); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.3); Has 485 Blast hits to 453 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 485; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative MLP, Description = Putative major latex-like protein, PFAM = PF00407)' T '20.1' 'stress.biotic' 'niben101scf11355_91205-95376' '(at5g15870 : 929.0) glycosyl hydrolase family 81 protein; FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, endo-1,3(4)-beta-glucanase activity; INVOLVED IN: response to cyclopentenone; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 81 (InterPro:IPR005200); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 81 protein (TAIR:AT1G18310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67267 : 650.0) no description available & (gnl|cdd|37465 : 614.0) no description available & (reliability: 1858.0) & (original description: Putative gbp, Description = Beta-glucan binding protein, PFAM = PF03639)' T '20.1' 'stress.biotic' 'niben101scf11546_54365-57524' '(gnl|cdd|84754 : 122.0) no description available & (at1g70840 : 102.0) MLP-like protein 31 (MLP31); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.3); Has 485 Blast hits to 453 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 485; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative NtSN1b, Description = Putative PR-10 type pathogenesis-related protein, PFAM = PF00407)' T '20.1' 'stress.biotic' 'niben101scf11564_180262-182894' '(at3g11660 : 223.0) encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus. Localization of the gene product is similar to that of NHL3 (plasma membrane) but it is yet inconclusive.; NDR1/HIN1-like 1 (NHL1); CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT3G52470.1); Has 917 Blast hits to 917 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 917; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 134.0) no description available & (reliability: 446.0) & (original description: Putative HIN1, Description = Late embryogenesis abundant hydroxyproline-rich glycoprotein, PFAM = PF03168)' T '20.1' 'stress.biotic' 'niben101scf11636_43892-47311' '(at4g38660 : 296.0) Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: THAUMATIN-LIKE PROTEIN 1 (TAIR:AT4G24180.1); Has 1636 Blast hits to 1618 proteins in 187 species: Archae - 0; Bacteria - 43; Metazoa - 60; Fungi - 87; Plants - 1419; Viruses - 4; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|47535 : 252.0) no description available & (p83332|tlp1_prupe : 228.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 592.0) & (original description: Putative PR5, Description = Pathogenesis-related protein 5, PFAM = PF00314)' T '20.1' 'stress.biotic' 'niben101scf11676_11563-17792' '(at5g49290 : 262.0) receptor like protein 56 (RLP56); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 14 (TAIR:AT1G74180.1); Has 112100 Blast hits to 30260 proteins in 1125 species: Archae - 53; Bacteria - 8278; Metazoa - 26127; Fungi - 1038; Plants - 68577; Viruses - 23; Other Eukaryotes - 8004 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 151.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35665 : 122.0) no description available & (reliability: 524.0) & (original description: Putative PGSC0003DMG402009338, Description = Putative ovule protein, PFAM = PF13855;PF13855;PF00560;PF08263)' T '20.1' 'stress.biotic' 'niben101scf12045_744963-747690' '(p29062|pr4a_tobac : 225.0) Pathogenesis-related protein PR-4A precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|64814 : 206.0) no description available & (at3g04720 : 178.0) Encodes a protein similar to the antifungal chitin-binding protein hevein from rubber tree latex. mRNA levels increase in response to ethylene and turnip crinkle virus infection.; pathogenesis-related 4 (PR4); FUNCTIONS IN: chitin binding; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Barwin (InterPro:IPR001153), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726), Barwin-related endoglucanase (InterPro:IPR009009), Chitin-binding, type 1, conserved site (InterPro:IPR018371), Barwin-like endoglucanase (InterPro:IPR014733), Barwin, conserved site (InterPro:IPR018226), Chitin-binding, type 1 (InterPro:IPR001002); BEST Arabidopsis thaliana protein match is: basic chitinase (TAIR:AT3G12500.1); Has 1702 Blast hits to 1458 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 253; Plants - 1414; Viruses - 10; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative pi1, Description = Pathogenesis-related protein 4, PFAM = PF00967)' T '20.1' 'stress.biotic' 'niben101scf12305_13030-18279' '(gnl|cdd|39857 : 296.0) no description available & (at5g48620 : 231.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 227.0) no description available & (reliability: 448.0) & (original description: Putative NBS173-3, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf13168_106469-111611' '(at5g65210 : 384.0) Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.; TGA1; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 4 (TAIR:AT5G10030.2); Has 674 Blast hits to 672 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 649; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (p14232|tga1a_tobac : 327.0) TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a) (ASF-1 protein) - Nicotiana tabacum (Common tobacco) & (reliability: 768.0) & (original description: Putative TGA1, Description = Transcription factor TGA1, PFAM = PF00170;PF14144)' T '20.1' 'stress.biotic' 'niben101scf13231_178055-183850' '(gnl|cdd|39857 : 256.0) no description available & (at5g35450 : 185.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 180.0) no description available & (reliability: 338.0) & (original description: Putative PGSC0003DMG400004873, Description = Putative ovule protein, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf13394_42957-46569' '(at4g11220 : 305.0) VIRB2-interacting protein 2 (BTI2); INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 1 (TAIR:AT4G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37003 : 249.0) no description available & (gnl|cdd|66169 : 233.0) no description available & (reliability: 596.0) & (original description: Putative RTNLB2, Description = Reticulon-like protein B2, PFAM = PF02453)' T '20.1' 'stress.biotic' 'niben101scf13842_126015-142638' '(at1g47890 : 403.0) receptor like protein 7 (RLP7); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 6 (TAIR:AT1G45616.1); Has 144165 Blast hits to 35486 proteins in 1317 species: Archae - 51; Bacteria - 13451; Metazoa - 35189; Fungi - 1938; Plants - 82186; Viruses - 41; Other Eukaryotes - 11309 (source: NCBI BLink). & (p93194|rpk1_iponi : 184.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 126.0) no description available & (reliability: 744.0) & (original description: Putative vdr3, Description = Leucine-rich-repeat receptor-like protein, PFAM = PF08263;PF00560;PF13855)' T '20.1' 'stress.biotic' 'niben101scf13926_197831-205737' '(p07053|pr1b_tobac : 289.0) Pathogenesis-related protein 1B precursor (PR-1B) - Nicotiana tabacum (Common tobacco) & (at2g14580 : 186.0) pathogenesis related protein, encodes a basic PR1-like protein. Expresses in flowers, roots, and not in leaves and responses to ethylene and methyl jasmonate. Salicylic acid represses gene expression.; basic pathogenesis-related protein 1 (PRB1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to ethylene stimulus, response to jasmonic acid stimulus, response to salicylic acid stimulus; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: shoot, shoot apex, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: pathogenesis-related gene 1 (TAIR:AT2G14610.1); Has 3181 Blast hits to 3075 proteins in 384 species: Archae - 0; Bacteria - 66; Metazoa - 1736; Fungi - 341; Plants - 911; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|29108 : 162.0) no description available & (gnl|cdd|38227 : 130.0) no description available & (reliability: 368.0) & (original description: Putative pr1, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T '20.1' 'stress.biotic' 'niben101scf14536_23366-25980' '(at3g20600 : 134.0) Required for non-race specific resistance to bacterial and fungal pathogens.Mediates systemic acquired resistance (SAR) response.; non race-specific disease resistance 1 (NDR1); CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT3G20590.1); Has 471 Blast hits to 471 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 471; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative NDR1, Description = Protein NDR1, PFAM = PF03168)' T '20.1' 'stress.biotic' 'niben101scf14922_129346-137187' '(at1g20780 : 221.0) Encodes a protein containing a U-box and an ARM domain.; senescence-associated E3 ubiquitin ligase 1 (SAUL1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of chlorophyll catabolic process, regulation of chlorophyll biosynthetic process, leaf senescence, regulation of abscisic acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G76390.2); Has 2790 Blast hits to 2660 proteins in 201 species: Archae - 0; Bacteria - 20; Metazoa - 434; Fungi - 161; Plants - 1969; Viruses - 3; Other Eukaryotes - 203 (source: NCBI BLink). & (gnl|cdd|47808 : 86.4) no description available & (q64ha9|spl11_orysa : 84.7) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 442.0) & (original description: Putative glysoja_015640, Description = U-box domain-containing protein 43, PFAM = PF05659;PF04826;PF04564)' T '20.1' 'stress.biotic' 'niben101scf17834_1-3294' '(at4g23630 : 222.0) VIRB2-interacting protein 1 (BTI1); INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 2 (TAIR:AT4G11220.1); Has 1242 Blast hits to 1240 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 705; Fungi - 11; Plants - 505; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|37003 : 195.0) no description available & (gnl|cdd|66169 : 178.0) no description available & (reliability: 444.0) & (original description: Putative RTNLB5, Description = Reticulon-like protein B5, PFAM = PF02453)' T '20.1' 'stress.biotic' 'niben101scf17839_525462-529811' '(gnl|cdd|39857 : 313.0) no description available & (gnl|cdd|85132 : 262.0) no description available & (at5g35450 : 235.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative , Description = NBS resistance protein RGA41, PFAM = PF00931)' T '20.1' 'stress.biotic' 'niben101scf23152_39515-43936' '(at4g11220 : 277.0) VIRB2-interacting protein 2 (BTI2); INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 1 (TAIR:AT4G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37003 : 234.0) no description available & (gnl|cdd|66169 : 212.0) no description available & (reliability: 538.0) & (original description: Putative PGSC0003DMG402028903, Description = Reticulon-like protein, PFAM = PF02453)' T '20.1' 'stress.biotic' 'niben101scf23606_72255-74854' '(at4g25780 : 229.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G57625.1); Has 3029 Blast hits to 2936 proteins in 376 species: Archae - 0; Bacteria - 66; Metazoa - 1646; Fungi - 332; Plants - 881; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (q40374|pr1_medtr : 164.0) Pathogenesis-related protein PR-1 precursor - Medicago truncatula (Barrel medic) & (gnl|cdd|29108 : 143.0) no description available & (gnl|cdd|38227 : 115.0) no description available & (reliability: 458.0) & (original description: Putative pr1, Description = STS14 protein, putative, PFAM = PF00188)' T '20.1' 'stress.biotic' 'niben101scf28925_22656-26422' '(at4g11220 : 272.0) VIRB2-interacting protein 2 (BTI2); INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 1 (TAIR:AT4G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37003 : 253.0) no description available & (gnl|cdd|66169 : 237.0) no description available & (reliability: 528.0) & (original description: Putative RTNLB5, Description = Reticulon-like protein B5, PFAM = PF02453)' T '20.1' 'stress.biotic' 'niben101scf30946_42139-44771' '(at3g44220 : 252.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT5G22200.1); Has 838 Blast hits to 838 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 838; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 153.0) no description available & (reliability: 504.0) & (original description: Putative NHL12, Description = NDR1/HIN1-like protein 12, PFAM = PF03168)' T '20.1' 'stress.biotic' 'niben101scf32536_44432-49671' '(at1g33970 : 332.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: response to bacterium; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G09950.1). & (gnl|cdd|86681 : 277.0) no description available & (reliability: 664.0) & (original description: Putative AIG1, Description = Protein AIG1, PFAM = PF04548)' T '20.1' 'stress.biotic' 'niben101scf33214_37431-45474' '(at4g29940 : 269.0) Homeodomain protein (PRHA). Expression of the gene differs in various vegetative and floral plant tissues and is positively influenced by the phytohormone auxin. It is often associated with regions of developing vascular tissue. The prha promoter is highly responsive to the synthetic auxin, naphthalene acetic acid, in transient assays using tobacco protoplasts. The PRHA protein has the capacity to bind to TAATTG core sequence elements but requires additional adjacent bases for high-affinity binding.; pathogenesis related homeodomain protein A (PRHA); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Homeodomain-like (InterPro:IPR009057), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain (TAIR:AT3G19510.1). & (p46605|hox1a_maize : 178.0) Homeobox protein HOX1A - Zea mays (Maize) & (gnl|cdd|39500 : 144.0) no description available & (reliability: 538.0) & (original description: Putative HD2, Description = HD domain class transcription factor, PFAM = PF00046;PF00628)' T '20.1' 'stress.biotic' 'niben101scf33820_14311-19824' '(q9zra3|dad1_pea : 183.0) Defender against cell death 1 (DAD-1) (Peadad) - Pisum sativum (Garden pea) & (at2g35520 : 182.0) DEFENDER AGAINST CELL DEATH 2 (DAD2); CONTAINS InterPro DOMAIN/s: Defender against death DAD protein (InterPro:IPR003038); BEST Arabidopsis thaliana protein match is: Defender against death (DAD family) protein (TAIR:AT1G32210.1); Has 458 Blast hits to 458 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 115; Plants - 102; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|36957 : 143.0) no description available & (gnl|cdd|85869 : 139.0) no description available & (reliability: 364.0) & (original description: Putative DAD1, Description = Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1, PFAM = PF02109)' T '20.1' 'stress.biotic' 'niben101scf37563_18993-22872' '(at4g38660 : 285.0) Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: THAUMATIN-LIKE PROTEIN 1 (TAIR:AT4G24180.1); Has 1636 Blast hits to 1618 proteins in 187 species: Archae - 0; Bacteria - 43; Metazoa - 60; Fungi - 87; Plants - 1419; Viruses - 4; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|47535 : 260.0) no description available & (p83332|tlp1_prupe : 211.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 570.0) & (original description: Putative TL1, Description = Thaumatin-like protein, PFAM = PF00314)' T '20.1.1' 'stress.biotic.respiratory burst' 'nbv0.3scaffold31093_3443-9948' '(at5g60010 : 972.0) ferric reductase-like transmembrane component family protein; FUNCTIONS IN: in 8 functions; INVOLVED IN: oxidation reduction; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), NADPH oxidase Respiratory burst (InterPro:IPR013623), Ferric reductase, NAD binding (InterPro:IPR013121), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: ferric reductase-like transmembrane component family protein (TAIR:AT3G45810.1); Has 1927 Blast hits to 1788 proteins in 283 species: Archae - 0; Bacteria - 154; Metazoa - 723; Fungi - 353; Plants - 523; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (gnl|cdd|35262 : 599.0) no description available & (gnl|cdd|87433 : 171.0) no description available & (reliability: 1944.0) & (original description: Putative RBOHH, Description = Putative respiratory burst oxidase homolog protein H, PFAM = PF08030;PF08414;PF08022;PF01794)' T '20.1.1' 'stress.biotic.respiratory burst' 'nbv0.3scaffold45577_4806-16523' '(at1g64060 : 1383.0) Interacts with AtrbohD gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site.; respiratory burst oxidase protein F (RBOH F); FUNCTIONS IN: NAD(P)H oxidase activity; INVOLVED IN: in 10 processes; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), NADPH oxidase Respiratory burst (InterPro:IPR013623), Ferric reductase, NAD binding (InterPro:IPR013121), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: Riboflavin synthase-like superfamily protein (TAIR:AT4G11230.1); Has 2419 Blast hits to 2261 proteins in 348 species: Archae - 6; Bacteria - 265; Metazoa - 742; Fungi - 676; Plants - 525; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|35262 : 702.0) no description available & (gnl|cdd|71844 : 173.0) no description available & (reliability: 2766.0) & (original description: Putative RBOHA, Description = Respiratory burst oxidase homolog protein A, PFAM = PF08030;PF08414;PF01794;PF08022)' T '20.1.1' 'stress.biotic.respiratory burst' 'nbv0.3scaffold52776_1480-13951' '(at1g19230 : 140.0) Riboflavin synthase-like superfamily protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: defense response; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Cytochrome b245, heavy chain (InterPro:IPR000778), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), Ferric reductase, NAD binding (InterPro:IPR013121), NADPH oxidase Respiratory burst (InterPro:IPR013623), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: respiratory burst oxidase protein F (TAIR:AT1G64060.1). & (gnl|cdd|71844 : 94.1) no description available & (reliability: 280.0) & (original description: Putative RBOHA, Description = Os09g0438000 protein, PFAM = PF08414)' T '20.1.1' 'stress.biotic.respiratory burst' 'nbv0.5scaffold6356_85817-95062' '(at1g19230 : 1154.0) Riboflavin synthase-like superfamily protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: defense response; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Cytochrome b245, heavy chain (InterPro:IPR000778), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), Ferric reductase, NAD binding (InterPro:IPR013121), NADPH oxidase Respiratory burst (InterPro:IPR013623), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: respiratory burst oxidase protein F (TAIR:AT1G64060.1). & (gnl|cdd|35262 : 629.0) no description available & (gnl|cdd|87433 : 161.0) no description available & (reliability: 2308.0) & (original description: Putative RBOHE, Description = Respiratory burst oxidase homolog protein E, PFAM = PF01794;PF08030;PF08414;PF08022)' T '20.1.1' 'stress.biotic.respiratory burst' 'niben044scf00002072ctg016_7185-12336' '(at1g64060 : 350.0) Interacts with AtrbohD gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site.; respiratory burst oxidase protein F (RBOH F); FUNCTIONS IN: NAD(P)H oxidase activity; INVOLVED IN: in 10 processes; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), NADPH oxidase Respiratory burst (InterPro:IPR013623), Ferric reductase, NAD binding (InterPro:IPR013121), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: Riboflavin synthase-like superfamily protein (TAIR:AT4G11230.1); Has 2419 Blast hits to 2261 proteins in 348 species: Archae - 6; Bacteria - 265; Metazoa - 742; Fungi - 676; Plants - 525; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|71844 : 164.0) no description available & (gnl|cdd|35262 : 87.7) no description available & (reliability: 700.0) & (original description: Putative rboh1, Description = Respiratory burst oxidase-like protein, PFAM = PF08414)' T '20.1.1' 'stress.biotic.respiratory burst' 'niben044scf00017995ctg021_14677-24084' '(at1g19230 : 1062.0) Riboflavin synthase-like superfamily protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: defense response; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Cytochrome b245, heavy chain (InterPro:IPR000778), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), Ferric reductase, NAD binding (InterPro:IPR013121), NADPH oxidase Respiratory burst (InterPro:IPR013623), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: respiratory burst oxidase protein F (TAIR:AT1G64060.1). & (gnl|cdd|35262 : 622.0) no description available & (gnl|cdd|87433 : 166.0) no description available & (reliability: 2124.0) & (original description: Putative RBOHE, Description = Respiratory burst oxidase homolog protein E, PFAM = PF08022;PF08414;PF08030;PF01794)' T '20.1.1' 'stress.biotic.respiratory burst' 'niben044scf00035718ctg003_3635-13400' '(at1g19230 : 1177.0) Riboflavin synthase-like superfamily protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: defense response; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Cytochrome b245, heavy chain (InterPro:IPR000778), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), Ferric reductase, NAD binding (InterPro:IPR013121), NADPH oxidase Respiratory burst (InterPro:IPR013623), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: respiratory burst oxidase protein F (TAIR:AT1G64060.1). & (gnl|cdd|35262 : 647.0) no description available & (gnl|cdd|87433 : 173.0) no description available & (reliability: 2354.0) & (original description: Putative RBOHE, Description = Respiratory burst oxidase homolog protein E, PFAM = PF01794;PF08414;PF08022;PF08030)' T '20.1.1' 'stress.biotic.respiratory burst' 'niben101scf00482_339914-360750' '(at5g60010 : 1011.0) ferric reductase-like transmembrane component family protein; FUNCTIONS IN: in 8 functions; INVOLVED IN: oxidation reduction; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), NADPH oxidase Respiratory burst (InterPro:IPR013623), Ferric reductase, NAD binding (InterPro:IPR013121), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: ferric reductase-like transmembrane component family protein (TAIR:AT3G45810.1); Has 1927 Blast hits to 1788 proteins in 283 species: Archae - 0; Bacteria - 154; Metazoa - 723; Fungi - 353; Plants - 523; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (gnl|cdd|35262 : 616.0) no description available & (gnl|cdd|87433 : 170.0) no description available & (reliability: 2022.0) & (original description: Putative RBOHH, Description = Putative respiratory burst oxidase homolog protein H, PFAM = PF01794;PF08414;PF08030;PF08022)' T '20.1.1' 'stress.biotic.respiratory burst' 'niben101scf01596_1170232-1179438' '(at5g51060 : 408.0) RHD2 (along with RHD3 and RHD4) is required for normal root hair elongation. Has NADPH oxidase activity. Gene is expressed in the elongation and differention zone in trichoblasts and elongating root hairs. RDH2 is localized to the growing tips of root hair cells. It is required for the production of reactive oxygen species in response to extracellular ATP stimulus. The increase in ROS production stimulates Ca2+ influx.; ROOT HAIR DEFECTIVE 2 (RHD2); CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), NADPH oxidase Respiratory burst (InterPro:IPR013623), Ferric reductase, NAD binding (InterPro:IPR013121), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: Riboflavin synthase-like superfamily protein (TAIR:AT4G25090.1); Has 2388 Blast hits to 2271 proteins in 341 species: Archae - 10; Bacteria - 214; Metazoa - 694; Fungi - 757; Plants - 530; Viruses - 0; Other Eukaryotes - 183 (source: NCBI BLink). & (gnl|cdd|35262 : 296.0) no description available & (gnl|cdd|87433 : 167.0) no description available & (reliability: 816.0) & (original description: Putative rboh, Description = Respiratory burst oxidase-like protein D, PFAM = PF08022;PF08030)' T '20.1.1' 'stress.biotic.respiratory burst' 'niben101scf02437_605563-614138' '(at1g19230 : 1135.0) Riboflavin synthase-like superfamily protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: defense response; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Cytochrome b245, heavy chain (InterPro:IPR000778), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), Ferric reductase, NAD binding (InterPro:IPR013121), NADPH oxidase Respiratory burst (InterPro:IPR013623), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: respiratory burst oxidase protein F (TAIR:AT1G64060.1). & (gnl|cdd|35262 : 626.0) no description available & (gnl|cdd|87433 : 171.0) no description available & (reliability: 2270.0) & (original description: Putative rboh, Description = Respiratory burst oxidase-like protein, PFAM = PF08030;PF01794;PF08022;PF08414)' T '20.1.1' 'stress.biotic.respiratory burst' 'niben101scf02581_423372-432157' '(at5g47910 : 1286.0) NADPH/respiratory burst oxidase protein D (RbohD).Interacts with AtrbohF gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site.; respiratory burst oxidase homologue D (RBOHD); FUNCTIONS IN: NAD(P)H oxidase activity; INVOLVED IN: oxygen and reactive oxygen species metabolic process, defense response to fungus, response to heat, defense response, negative regulation of programmed cell death; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), NADPH oxidase Respiratory burst (InterPro:IPR013623), Ferric reductase, NAD binding (InterPro:IPR013121), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: NADPH/respiratory burst oxidase protein D (TAIR:AT5G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35262 : 712.0) no description available & (gnl|cdd|71844 : 172.0) no description available & (reliability: 2572.0) & (original description: Putative RBOHC, Description = Respiratory burst oxidase homolog protein C, PFAM = PF08414;PF08030;PF01794;PF08022)' T '20.1.1' 'stress.biotic.respiratory burst' 'niben101scf05682_24175-33775' '(at1g19230 : 1174.0) Riboflavin synthase-like superfamily protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: defense response; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Cytochrome b245, heavy chain (InterPro:IPR000778), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), Ferric reductase, NAD binding (InterPro:IPR013121), NADPH oxidase Respiratory burst (InterPro:IPR013623), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: respiratory burst oxidase protein F (TAIR:AT1G64060.1). & (gnl|cdd|35262 : 648.0) no description available & (gnl|cdd|87433 : 172.0) no description available & (reliability: 2348.0) & (original description: Putative RBOHE, Description = Respiratory burst oxidase homolog protein E, PFAM = PF08022;PF08414;PF01794;PF08030)' T '20.1.1' 'stress.biotic.respiratory burst' 'niben101scf05682_24181-33216' '(at1g19230 : 1111.0) Riboflavin synthase-like superfamily protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: defense response; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Cytochrome b245, heavy chain (InterPro:IPR000778), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), Ferric reductase, NAD binding (InterPro:IPR013121), NADPH oxidase Respiratory burst (InterPro:IPR013623), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: respiratory burst oxidase protein F (TAIR:AT1G64060.1). & (gnl|cdd|35262 : 599.0) no description available & (gnl|cdd|71844 : 150.0) no description available & (reliability: 2222.0) & (original description: Putative RBOHE, Description = Respiratory burst oxidase homolog protein E, PFAM = PF13202;PF01794;PF08030;PF08414;PF08022)' T '20.1.1' 'stress.biotic.respiratory burst' 'niben101scf07345_42127-50489' '(at5g47910 : 1291.0) NADPH/respiratory burst oxidase protein D (RbohD).Interacts with AtrbohF gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site.; respiratory burst oxidase homologue D (RBOHD); FUNCTIONS IN: NAD(P)H oxidase activity; INVOLVED IN: oxygen and reactive oxygen species metabolic process, defense response to fungus, response to heat, defense response, negative regulation of programmed cell death; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), NADPH oxidase Respiratory burst (InterPro:IPR013623), Ferric reductase, NAD binding (InterPro:IPR013121), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: NADPH/respiratory burst oxidase protein D (TAIR:AT5G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35262 : 714.0) no description available & (gnl|cdd|71844 : 170.0) no description available & (reliability: 2582.0) & (original description: Putative RBOHC, Description = Respiratory burst oxidase homolog protein C, PFAM = PF08030;PF01794;PF08414;PF08022)' T '20.1.1' 'stress.biotic.respiratory burst' 'niben101scf10840_207322-233039' '(at1g64060 : 1389.0) Interacts with AtrbohD gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site.; respiratory burst oxidase protein F (RBOH F); FUNCTIONS IN: NAD(P)H oxidase activity; INVOLVED IN: in 10 processes; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), NADPH oxidase Respiratory burst (InterPro:IPR013623), Ferric reductase, NAD binding (InterPro:IPR013121), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: Riboflavin synthase-like superfamily protein (TAIR:AT4G11230.1); Has 2419 Blast hits to 2261 proteins in 348 species: Archae - 6; Bacteria - 265; Metazoa - 742; Fungi - 676; Plants - 525; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|35262 : 699.0) no description available & (gnl|cdd|71844 : 175.0) no description available & (reliability: 2778.0) & (original description: Putative RBOHA, Description = Respiratory burst oxidase homolog protein A, PFAM = PF01794;PF08414;PF08022;PF08030)' T '20.1.2' 'stress.biotic.receptors' 'nbv0.3scaffold15664_27828-30905' '(at1g72840 : 144.0) Disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: ovule, embryo, sperm cell, root, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G48770.1). & (gnl|cdd|85544 : 110.0) no description available & (reliability: 288.0) & (original description: Putative nl25, Description = TIR-NBS disease resistance-like protein, PFAM = PF01582)' T '20.1.2' 'stress.biotic.receptors' 'nbv0.3scaffold36705_16541-19542' '(at5g17680 : 158.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85544 : 131.0) no description available & (reliability: 296.0) & (original description: Putative nl25, Description = TIR-NBS disease resistance-like protein, PFAM = PF01582)' T '20.1.2' 'stress.biotic.receptors' 'nbv0.3scaffold94495_1988-4406' '(at1g27180 : 90.9) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: transmembrane receptors;ATP binding (TAIR:AT1G27170.1); Has 83534 Blast hits to 33450 proteins in 1183 species: Archae - 68; Bacteria - 4700; Metazoa - 16188; Fungi - 1127; Plants - 56869; Viruses - 12; Other Eukaryotes - 4570 (source: NCBI BLink). & (gnl|cdd|85544 : 80.7) no description available & (reliability: 179.4) & (original description: Putative muRdr1B, Description = TMV resistance protein N, PFAM = PF01582)' T '20.1.2' 'stress.biotic.receptors' 'nbv0.5scaffold2695_296103-310299' '(at1g27170 : 372.0) transmembrane receptors;ATP binding; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT1G27180.1); Has 88149 Blast hits to 36022 proteins in 1268 species: Archae - 44; Bacteria - 5525; Metazoa - 17765; Fungi - 1406; Plants - 58458; Viruses - 8; Other Eukaryotes - 4943 (source: NCBI BLink). & (gnl|cdd|85132 : 157.0) no description available & (gnl|cdd|39857 : 124.0) no description available & (reliability: 744.0) & (original description: Putative NLR4, Description = TMV resistance protein N, PFAM = PF00931;PF01582)' T '20.1.2' 'stress.biotic.receptors' 'nbv0.5scaffold3511_15576-21770' '(at5g17680 : 403.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39857 : 127.0) no description available & (gnl|cdd|85544 : 126.0) no description available & (reliability: 756.0) & (original description: Putative R4, Description = Putative TIR-NBS type R protein 4, PFAM = PF00931;PF01582)' T '20.1.2' 'stress.biotic.receptors' 'nbv0.5scaffold3511_15588-21296' '(at5g17680 : 378.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39857 : 126.0) no description available & (gnl|cdd|85544 : 126.0) no description available & (reliability: 738.0) & (original description: Putative rj2, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF01582;PF00931)' T '20.1.2' 'stress.biotic.receptors' 'niben044scf00014844ctg020_3538-5969' '(at5g17680 : 95.9) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47584 : 86.6) no description available & (reliability: 184.8) & (original description: Putative HD17, Description = TIR-NBS type disease resistance protein, PFAM = PF01582)' T '20.1.2' 'stress.biotic.receptors' 'niben044scf00015188ctg000_23841-26313' '(at5g17680 : 110.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47584 : 96.6) no description available & (reliability: 216.0) & (original description: Putative CN, Description = TMV resistance protein N, PFAM = PF01582)' T '20.1.2' 'stress.biotic.receptors' 'niben044scf00021168ctg005_2643-5352' '(at5g48770 : 200.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT1G72840.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85544 : 124.0) no description available & (reliability: 394.0) & (original description: Putative rj2, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF01582;PF00931)' T '20.1.2' 'stress.biotic.receptors' 'niben044scf00021476ctg004_8022-10128' '(at4g12010 : 93.6) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT4G19510.1); Has 31049 Blast hits to 21052 proteins in 960 species: Archae - 20; Bacteria - 2553; Metazoa - 5096; Fungi - 331; Plants - 21936; Viruses - 4; Other Eukaryotes - 1109 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative KR1, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF00931)' T '20.1.2' 'stress.biotic.receptors' 'niben044scf00025611ctg002_3035-6492' '(at1g27180 : 255.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: transmembrane receptors;ATP binding (TAIR:AT1G27170.1); Has 83534 Blast hits to 33450 proteins in 1183 species: Archae - 68; Bacteria - 4700; Metazoa - 16188; Fungi - 1127; Plants - 56869; Viruses - 12; Other Eukaryotes - 4570 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative At1g27170, Description = Disease resistance protein (TIR-NBS-LRR class), putative, PFAM = )' T '20.1.2' 'stress.biotic.receptors' 'niben044scf00030171ctg011_5117-8241' '(at1g72840 : 144.0) Disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: ovule, embryo, sperm cell, root, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G48770.1). & (gnl|cdd|85544 : 109.0) no description available & (reliability: 288.0) & (original description: Putative nl25, Description = TIR-NBS disease resistance-like protein, PFAM = PF01582)' T '20.1.2' 'stress.biotic.receptors' 'niben044scf00042921ctg000_1-2002' '(at1g27170 : 101.0) transmembrane receptors;ATP binding; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT1G27180.1); Has 88149 Blast hits to 36022 proteins in 1268 species: Archae - 44; Bacteria - 5525; Metazoa - 17765; Fungi - 1406; Plants - 58458; Viruses - 8; Other Eukaryotes - 4943 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative KR1, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF00931)' T '20.1.2' 'stress.biotic.receptors' 'niben101scf00269_2191-8376' '(at5g36930 : 469.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39857 : 150.0) no description available & (gnl|cdd|85544 : 128.0) no description available & (reliability: 862.0) & (original description: Putative PGSC0003DMG400020935, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF00931;PF01582)' T '20.1.2' 'stress.biotic.receptors' 'niben101scf00269_2665-8415' '(at5g17680 : 378.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85544 : 126.0) no description available & (gnl|cdd|39857 : 125.0) no description available & (reliability: 740.0) & (original description: Putative R4, Description = Putative TIR-NBS type R protein 4, PFAM = PF01582;PF00931)' T '20.1.2' 'stress.biotic.receptors' 'niben101scf00269_124273-126757' '(at1g27170 : 103.0) transmembrane receptors;ATP binding; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT1G27180.1); Has 88149 Blast hits to 36022 proteins in 1268 species: Archae - 44; Bacteria - 5525; Metazoa - 17765; Fungi - 1406; Plants - 58458; Viruses - 8; Other Eukaryotes - 4943 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative KR1, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF00931)' T '20.1.2' 'stress.biotic.receptors' 'niben101scf00269_124716-125811' '(at4g12010 : 95.1) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT4G19510.1); Has 31049 Blast hits to 21052 proteins in 960 species: Archae - 20; Bacteria - 2553; Metazoa - 5096; Fungi - 331; Plants - 21936; Viruses - 4; Other Eukaryotes - 1109 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative NBS1, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF00931)' T '20.1.2' 'stress.biotic.receptors' 'niben101scf04191_516038-534940' '(at1g27170 : 1033.0) transmembrane receptors;ATP binding; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT1G27180.1); Has 88149 Blast hits to 36022 proteins in 1268 species: Archae - 44; Bacteria - 5525; Metazoa - 17765; Fungi - 1406; Plants - 58458; Viruses - 8; Other Eukaryotes - 4943 (source: NCBI BLink). & (gnl|cdd|39857 : 143.0) no description available & (gnl|cdd|85132 : 135.0) no description available & (reliability: 2066.0) & (original description: Putative NBS162, Description = NBS-coding resistance gene analog, PFAM = PF01582;PF00931)' T '20.1.2' 'stress.biotic.receptors' 'niben101scf05109_284921-329909' '(at5g36930 : 161.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85544 : 128.0) no description available & (reliability: 294.0) & (original description: Putative nl25, Description = TIR-NBS disease resistance-like protein, PFAM = PF01582)' T '20.1.2' 'stress.biotic.receptors' 'niben101scf06848_670783-673860' '(at1g72840 : 144.0) Disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: ovule, embryo, sperm cell, root, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G48770.1). & (gnl|cdd|85544 : 108.0) no description available & (reliability: 288.0) & (original description: Putative nl25, Description = TIR-NBS disease resistance-like protein, PFAM = PF01582)' T '20.1.2' 'stress.biotic.receptors' 'niben101scf06848_752059-755105' '(at5g17680 : 115.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85544 : 90.4) no description available & (reliability: 222.0) & (original description: Putative CN, Description = N-like protein, PFAM = PF01582)' T '20.1.3' 'stress.biotic.signalling' 'nbv0.3scaffold36634_4334-8058' '(at1g19180 : 129.0) JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.; TIFY10A; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: TIFY domain/Divergent CCT motif family protein (TAIR:AT1G74950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative SlSRG1, Description = Jasmonate ZIM-domain protein 1, PFAM = PF09425;PF06200)' T '20.1.3' 'stress.biotic.signalling' 'niben044scf00015551ctg010_5121-10099' '(at3g48090 : 426.0) Component of R gene-mediated disease resistance in Arabidopsis thaliana with homology to eukaryotic lipases.; enhanced disease susceptibility 1 (EDS1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 852.0) & (original description: Putative EDS1B, Description = Protein EDS1B, PFAM = PF01764)' T '20.1.3' 'stress.biotic.signalling' 'niben101scf00298_88653-92313' '(at1g19180 : 124.0) JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.; TIFY10A; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: TIFY domain/Divergent CCT motif family protein (TAIR:AT1G74950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative TIFY10A, Description = Protein TIFY 10A, PFAM = PF06200;PF09425)' T '20.1.3' 'stress.biotic.signalling' 'niben101scf03069_38248-43367' '(at5g51700 : 272.0) Encodes a resistance signalling protein with two zinc binding (CHORD) domains that are highly conserved across eukaryotic phyla. Mutant has reduced RPS5 and RPM1 mediated resistance. Potentially involved in transduction of R gene mediated disease resistance. Required for R protein accumulation.; PPHB SUSCEPTIBLE 2 (PBS2); CONTAINS InterPro DOMAIN/s: Cysteine/histidine-rich domain (InterPro:IPR007051); Has 933 Blast hits to 477 proteins in 168 species: Archae - 0; Bacteria - 18; Metazoa - 449; Fungi - 191; Plants - 188; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|36880 : 131.0) no description available & (gnl|cdd|68539 : 94.6) no description available & (reliability: 544.0) & (original description: Putative RAR1, Description = Cysteine and histidine-rich domain-containing protein RAR1, PFAM = PF04968;PF04968)' T '20.1.3' 'stress.biotic.signalling' 'niben101scf05529_15403-36263' '(at4g37460 : 1291.0) Encodes a tetratricopeptide repeat domain containing protein that shows sequence similarity to those of transcriptional repressors in other organisms.Involved in mediating effector-triggered immunity.; SUPPRESSOR OF RPS4-RLD 1 (SRFR1); FUNCTIONS IN: protein complex scaffold; INVOLVED IN: defense response to bacterium, incompatible interaction, defense response to bacterium, negative regulation of transcription, negative regulation of defense response; LOCATED IN: nucleus, perinuclear region of cytoplasm, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39826 : 90.9) no description available & (reliability: 2582.0) & (original description: Putative SRFR1, Description = Suppressor of RPS4-RLD 1, PFAM = PF13176;PF13181;PF13181;PF13432)' T '20.1.3' 'stress.biotic.signalling' 'niben101scf06720_216736-221502' '(at3g48080 : 434.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: lipase activity, triglyceride lipase activity, signal transducer activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48090.1); Has 522 Blast hits to 472 proteins in 44 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 2; Plants - 484; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 862.0) & (original description: Putative EDS1, Description = Protein EDS1, PFAM = PF01764)' T '20.1.3' 'stress.biotic.signalling' 'niben101scf07532_95264-100234' '(at5g51700 : 281.0) Encodes a resistance signalling protein with two zinc binding (CHORD) domains that are highly conserved across eukaryotic phyla. Mutant has reduced RPS5 and RPM1 mediated resistance. Potentially involved in transduction of R gene mediated disease resistance. Required for R protein accumulation.; PPHB SUSCEPTIBLE 2 (PBS2); CONTAINS InterPro DOMAIN/s: Cysteine/histidine-rich domain (InterPro:IPR007051); Has 933 Blast hits to 477 proteins in 168 species: Archae - 0; Bacteria - 18; Metazoa - 449; Fungi - 191; Plants - 188; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|36880 : 136.0) no description available & (gnl|cdd|68539 : 95.4) no description available & (reliability: 562.0) & (original description: Putative RAR1, Description = Cysteine and histidine-rich domain-containing protein RAR1, PFAM = PF04968;PF04968)' T '20.1.3' 'stress.biotic.signalling' 'niben101scf16657_78927-81633' '(at1g19180 : 132.0) JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.; TIFY10A; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: TIFY domain/Divergent CCT motif family protein (TAIR:AT1G74950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative JAZ1, Description = BnaA09g44300D protein, PFAM = PF06200;PF09425)' T '20.1.3' 'stress.biotic.signalling' 'niben101scf18667_114122-116814' '(at3g18690 : 84.0) Encodes a nuclear-localized member of a plant specific gene family involved in mediating responses to pathogens. Interacts with WRKY transcriptional regulators.; MAP kinase substrate 1 (MKS1); CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT1G21326.1); Has 153 Blast hits to 153 proteins in 16 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 1; Plants - 147; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative MKS1, Description = Protein MKS1, PFAM = PF05678)' T '20.1.3' 'stress.biotic.signalling' 'niben101scf34602_3082-6794' '(at1g19180 : 133.0) JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.; TIFY10A; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: TIFY domain/Divergent CCT motif family protein (TAIR:AT1G74950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative , Description = Jasmonate ZIM-domain protein 1, PFAM = PF09425;PF06200)' T '20.1.3.1' 'stress.biotic.signalling.MLO-like' 'nbv0.3scaffold24123_5269-22545' '(gnl|cdd|66748 : 331.0) no description available & (at3g45290 : 330.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO3 belongs to the clade IV, with AtMLO2, AtMLO6 and AtMLO12. The gene is expressed during early seedling growth, in primary root and lateral root primordia, in fruit abscission zone, in vascular system of cotyledons and in trichomes of young leaves,; it was not expressed in mature rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 3 (MLO3); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT2G39200.1); Has 534 Blast hits to 527 proteins in 60 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 520; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (o49873|mloh1_horvu : 266.0) MLO protein homolog 1 - Hordeum vulgare (Barley) & (reliability: 660.0) & (original description: Putative mlo2, Description = MLO-like protein, PFAM = PF03094)' T '20.1.3.1' 'stress.biotic.signalling.MLO-like' 'nbv0.3scaffold27418_1289-10726' '(gnl|cdd|66748 : 428.0) no description available & (at1g11000 : 427.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO4 belongs to the clade I, with AtMLO11 and AtMLO14. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of root, cotyledons and young leaves, it was not expressed in mature rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 4 (MLO4); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT5G53760.2); Has 528 Blast hits to 517 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 522; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (p93766|mlo_horvu : 260.0) Protein MLO - Hordeum vulgare (Barley) & (reliability: 854.0) & (original description: Putative MLO4, Description = MLO-like protein 4, PFAM = PF03094;PF03094)' T '20.1.3.1' 'stress.biotic.signalling.MLO-like' 'nbv0.5scaffold1756_132878-142315' '(gnl|cdd|66748 : 284.0) no description available & (at1g11000 : 283.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO4 belongs to the clade I, with AtMLO11 and AtMLO14. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of root, cotyledons and young leaves, it was not expressed in mature rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 4 (MLO4); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT5G53760.2); Has 528 Blast hits to 517 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 522; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (o49914|mloh1_orysa : 192.0) MLO protein homolog 1 (OsMLO1) - Oryza sativa (Rice) & (reliability: 566.0) & (original description: Putative MLO, Description = MLO-like protein, PFAM = PF03094;PF03094)' T '20.1.3.1' 'stress.biotic.signalling.MLO-like' 'nbv0.5scaffold2789_186260-193428' '(gnl|cdd|66748 : 435.0) no description available & (at1g61560 : 415.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of cotyledons, young leaves and petals, in mature rosette leaves, in anthers, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 6 (MLO6); CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G11310.1). & (o49873|mloh1_horvu : 311.0) MLO protein homolog 1 - Hordeum vulgare (Barley) & (reliability: 830.0) & (original description: Putative MLO, Description = MLO-like protein, PFAM = PF03094)' T '20.1.3.1' 'stress.biotic.signalling.MLO-like' 'nbv0.5scaffold9738_3183-14626' '(gnl|cdd|66748 : 440.0) no description available & (at1g11000 : 429.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO4 belongs to the clade I, with AtMLO11 and AtMLO14. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of root, cotyledons and young leaves, it was not expressed in mature rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 4 (MLO4); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT5G53760.2); Has 528 Blast hits to 517 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 522; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (p93766|mlo_horvu : 268.0) Protein MLO - Hordeum vulgare (Barley) & (reliability: 858.0) & (original description: Putative MLO4, Description = MLO-like protein 4, PFAM = PF03094)' T '20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben044scf00013098ctg000_1-7639' '(at1g61560 : 611.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of cotyledons, young leaves and petals, in mature rosette leaves, in anthers, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 6 (MLO6); CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G11310.1). & (gnl|cdd|66748 : 598.0) no description available & (o49873|mloh1_horvu : 416.0) MLO protein homolog 1 - Hordeum vulgare (Barley) & (reliability: 1222.0) & (original description: Putative MLO6, Description = MLO-like protein 6, PFAM = PF03094)' T '20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben044scf00029318ctg000_532-8143' '(gnl|cdd|66748 : 568.0) no description available & (at4g02600 : 556.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO1 belongs to the clade II, with ATMLO13 and ATMLO15. The gene is expressed during early seedling growth, in root and cotyledon vascular system, in pollen and in papillae, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MLO1; FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT2G44110.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p93766|mlo_horvu : 302.0) Protein MLO - Hordeum vulgare (Barley) & (reliability: 1112.0) & (original description: Putative MLO1, Description = MLO-like protein 1, PFAM = PF03094;PF03094)' T '20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben044scf00034956ctg004_2470-9788' '(gnl|cdd|66748 : 694.0) no description available & (at2g39200 : 660.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in root tips and cotyledon vascular system, in floral organs (anthers and stigma), and in fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 12 (MLO12); FUNCTIONS IN: calmodulin binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cyclopentenone, leaf senescence, cell death, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G11310.1); Has 552 Blast hits to 537 proteins in 59 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 545; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (o49914|mloh1_orysa : 458.0) MLO protein homolog 1 (OsMLO1) - Oryza sativa (Rice) & (reliability: 1320.0) & (original description: Putative MLO6, Description = MLO-like protein 6, PFAM = PF03094)' T '20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf00381_562120-570643' '(gnl|cdd|66748 : 693.0) no description available & (at2g17480 : 682.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO8 belongs to the clade III, with AtMLO5, AtMLO7, AtMLO9, and AtMLO10. The gene is expressed during seedling growth, in cotyledons and hypocotyl, and in fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 8 (MLO8); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT5G65970.1); Has 544 Blast hits to 526 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 539; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (o49873|mloh1_horvu : 476.0) MLO protein homolog 1 - Hordeum vulgare (Barley) & (reliability: 1364.0) & (original description: Putative MLO8, Description = MLO-like protein 8, PFAM = PF03094)' T '20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf00406_591119-598687' '(at1g61560 : 644.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of cotyledons, young leaves and petals, in mature rosette leaves, in anthers, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 6 (MLO6); CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G11310.1). & (gnl|cdd|66748 : 628.0) no description available & (o49873|mloh1_horvu : 440.0) MLO protein homolog 1 - Hordeum vulgare (Barley) & (reliability: 1288.0) & (original description: Putative MLO6, Description = MLO-like protein 6, PFAM = PF03094)' T '20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf00777_98347-112204' '(gnl|cdd|66748 : 653.0) no description available & (at2g33670 : 563.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO5 belongs to the clade III, with AtMLO7, AtMLO8, AtMLO9, and AtMLO10. The gene is expressed during seedling growth, in cotyledon vascular system, and in stigma, anther and pollen grains; it was not expressed in rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 5 (MLO5); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G42560.1); Has 551 Blast hits to 537 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 544; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (o49914|mloh1_orysa : 443.0) MLO protein homolog 1 (OsMLO1) - Oryza sativa (Rice) & (reliability: 1126.0) & (original description: Putative MLO5, Description = MLO-like protein 5, PFAM = PF03094)' T '20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf01513_48286-55897' '(gnl|cdd|66748 : 640.0) no description available & (at4g02600 : 630.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO1 belongs to the clade II, with ATMLO13 and ATMLO15. The gene is expressed during early seedling growth, in root and cotyledon vascular system, in pollen and in papillae, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MLO1; FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT2G44110.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o49914|mloh1_orysa : 350.0) MLO protein homolog 1 (OsMLO1) - Oryza sativa (Rice) & (reliability: 1260.0) & (original description: Putative MLO1, Description = MLO-like protein 1, PFAM = PF03094)' T '20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf01993_922157-929580' '(at1g11000 : 679.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO4 belongs to the clade I, with AtMLO11 and AtMLO14. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of root, cotyledons and young leaves, it was not expressed in mature rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 4 (MLO4); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT5G53760.2); Has 528 Blast hits to 517 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 522; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|66748 : 536.0) no description available & (o49873|mloh1_horvu : 254.0) MLO protein homolog 1 - Hordeum vulgare (Barley) & (reliability: 1358.0) & (original description: Putative MLO4, Description = MLO-like protein 4, PFAM = PF03094)' T '20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf02560_31054-43683' '(at5g53760 : 719.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO11 belongs to the clade I, with AtMLO4 and AtMLO14. The gene is expressed during early seedling growth (in primary root), in root tips and lateral root primordia, and in very young leaves, and in flowers and fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 11 (MLO11); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G26700.1); Has 534 Blast hits to 523 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 525; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|66748 : 497.0) no description available & (p93766|mlo_horvu : 264.0) Protein MLO - Hordeum vulgare (Barley) & (reliability: 1438.0) & (original description: Putative MLO11, Description = MLO-like protein 11, PFAM = PF03094)' T '20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf02837_479405-482520' '(gnl|cdd|66748 : 145.0) no description available & (at4g02600 : 142.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO1 belongs to the clade II, with ATMLO13 and ATMLO15. The gene is expressed during early seedling growth, in root and cotyledon vascular system, in pollen and in papillae, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MLO1; FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT2G44110.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o49873|mloh1_horvu : 91.7) MLO protein homolog 1 - Hordeum vulgare (Barley) & (reliability: 284.0) & (original description: Putative mlo8, Description = MLO-like protein, PFAM = PF03094)' T '20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf03292_320751-329900' '(gnl|cdd|66748 : 699.0) no description available & (at1g61560 : 697.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of cotyledons, young leaves and petals, in mature rosette leaves, in anthers, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 6 (MLO6); CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G11310.1). & (o49873|mloh1_horvu : 467.0) MLO protein homolog 1 - Hordeum vulgare (Barley) & (reliability: 1394.0) & (original description: Putative MLO6, Description = MLO-like protein 6, PFAM = PF03094)' T '20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf04481_111933-118154' '(gnl|cdd|66748 : 585.0) no description available & (at4g24250 : 473.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO13 belongs to the clade II, with ATMLO1 and ATMLO15. The gene is expressed during early seedling growth, in root and cotyledon vascular system, in pollen and also in placenta of developing siliques, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 13 (MLO13); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: seedling growth, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT4G02600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o49914|mloh1_orysa : 343.0) MLO protein homolog 1 (OsMLO1) - Oryza sativa (Rice) & (reliability: 946.0) & (original description: Putative MLO13, Description = MLO-like protein 13, PFAM = PF03094)' T '20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf04663_257518-260184' '(gnl|cdd|66748 : 139.0) no description available & (at2g33670 : 135.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO5 belongs to the clade III, with AtMLO7, AtMLO8, AtMLO9, and AtMLO10. The gene is expressed during seedling growth, in cotyledon vascular system, and in stigma, anther and pollen grains; it was not expressed in rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 5 (MLO5); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G42560.1); Has 551 Blast hits to 537 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 544; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (o49914|mloh1_orysa : 97.1) MLO protein homolog 1 (OsMLO1) - Oryza sativa (Rice) & (reliability: 270.0) & (original description: Putative MLO, Description = MLO-like protein, PFAM = PF03094)' T '20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf04663_257991-262338' '(gnl|cdd|66748 : 347.0) no description available & (at2g33670 : 319.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO5 belongs to the clade III, with AtMLO7, AtMLO8, AtMLO9, and AtMLO10. The gene is expressed during seedling growth, in cotyledon vascular system, and in stigma, anther and pollen grains; it was not expressed in rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 5 (MLO5); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G42560.1); Has 551 Blast hits to 537 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 544; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (o49914|mloh1_orysa : 244.0) MLO protein homolog 1 (OsMLO1) - Oryza sativa (Rice) & (reliability: 638.0) & (original description: Putative MLO, Description = MLO-like protein, PFAM = PF03094)' T '20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf06856_149269-160525' '(gnl|cdd|66748 : 442.0) no description available & (at1g11000 : 441.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO4 belongs to the clade I, with AtMLO11 and AtMLO14. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of root, cotyledons and young leaves, it was not expressed in mature rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 4 (MLO4); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT5G53760.2); Has 528 Blast hits to 517 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 522; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (p93766|mlo_horvu : 272.0) Protein MLO - Hordeum vulgare (Barley) & (reliability: 882.0) & (original description: Putative MLO4, Description = MLO-like protein 4, PFAM = PF03094)' T '20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf07008_309646-317866' '(gnl|cdd|66748 : 615.0) no description available & (at4g02600 : 573.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO1 belongs to the clade II, with ATMLO13 and ATMLO15. The gene is expressed during early seedling growth, in root and cotyledon vascular system, in pollen and in papillae, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MLO1; FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT2G44110.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o49873|mloh1_horvu : 326.0) MLO protein homolog 1 - Hordeum vulgare (Barley) & (reliability: 1146.0) & (original description: Putative MLO1, Description = MLO-like protein 1, PFAM = PF03094)' T '20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf07024_13222-21848' '(gnl|cdd|66748 : 607.0) no description available & (at4g02600 : 593.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO1 belongs to the clade II, with ATMLO13 and ATMLO15. The gene is expressed during early seedling growth, in root and cotyledon vascular system, in pollen and in papillae, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MLO1; FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT2G44110.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o49914|mloh1_orysa : 325.0) MLO protein homolog 1 (OsMLO1) - Oryza sativa (Rice) & (reliability: 1186.0) & (original description: Putative MLO1, Description = MLO-like protein 1, PFAM = PF03094)' T '20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf07027_500289-508886' '(gnl|cdd|66748 : 702.0) no description available & (at2g17480 : 663.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO8 belongs to the clade III, with AtMLO5, AtMLO7, AtMLO9, and AtMLO10. The gene is expressed during seedling growth, in cotyledons and hypocotyl, and in fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 8 (MLO8); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT5G65970.1); Has 544 Blast hits to 526 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 539; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (p93766|mlo_horvu : 444.0) Protein MLO - Hordeum vulgare (Barley) & (reliability: 1326.0) & (original description: Putative MLO8, Description = MLO-like protein 8, PFAM = PF03094)' T '20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf07792_91923-125951' '(gnl|cdd|66748 : 356.0) no description available & (at1g61560 : 334.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of cotyledons, young leaves and petals, in mature rosette leaves, in anthers, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 6 (MLO6); CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G11310.1). & (p93766|mlo_horvu : 196.0) Protein MLO - Hordeum vulgare (Barley) & (reliability: 668.0) & (original description: Putative MLO, Description = MLO-like protein, PFAM = PF03094)' T '20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf07792_92700-130217' '(gnl|cdd|66748 : 686.0) no description available & (at1g61560 : 665.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of cotyledons, young leaves and petals, in mature rosette leaves, in anthers, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 6 (MLO6); CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G11310.1). & (o49914|mloh1_orysa : 445.0) MLO protein homolog 1 (OsMLO1) - Oryza sativa (Rice) & (reliability: 1330.0) & (original description: Putative MLO6, Description = MLO-like protein 6, PFAM = PF03094)' T '20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf07792_230543-250978' '(gnl|cdd|66748 : 547.0) no description available & (at3g45290 : 513.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO3 belongs to the clade IV, with AtMLO2, AtMLO6 and AtMLO12. The gene is expressed during early seedling growth, in primary root and lateral root primordia, in fruit abscission zone, in vascular system of cotyledons and in trichomes of young leaves,; it was not expressed in mature rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 3 (MLO3); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT2G39200.1); Has 534 Blast hits to 527 proteins in 60 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 520; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (o49873|mloh1_horvu : 411.0) MLO protein homolog 1 - Hordeum vulgare (Barley) & (reliability: 1026.0) & (original description: Putative MLO3, Description = MLO-like protein 3, PFAM = PF03094)' T '20.1.3.1' 'stress.biotic.signalling.MLO-like' 'niben101scf21242_20065-27383' '(gnl|cdd|66748 : 709.0) no description available & (at1g61560 : 687.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of cotyledons, young leaves and petals, in mature rosette leaves, in anthers, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 6 (MLO6); CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G11310.1). & (o49873|mloh1_horvu : 468.0) MLO protein homolog 1 - Hordeum vulgare (Barley) & (reliability: 1374.0) & (original description: Putative MLO12, Description = MLO-like protein 12, PFAM = PF03094)' T '20.1.4' 'stress.biotic.kinases' 'nbv0.5scaffold1194_141492-146299' '(at3g05660 : 362.0) receptor like protein 33 (RLP33); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 32 (TAIR:AT3G05650.1); Has 122499 Blast hits to 32804 proteins in 1196 species: Archae - 55; Bacteria - 8957; Metazoa - 28470; Fungi - 1471; Plants - 73451; Viruses - 13; Other Eukaryotes - 10082 (source: NCBI BLink). & (p93194|rpk1_iponi : 185.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 114.0) no description available & (reliability: 724.0) & (original description: Putative vdr3, Description = Receptor-like protein 12, PFAM = PF13855;PF13855;PF13855;PF08263)' T '20.1.4' 'stress.biotic.kinases' 'nbv0.5scaffold1194_204190-208970' '(at3g05660 : 355.0) receptor like protein 33 (RLP33); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 32 (TAIR:AT3G05650.1); Has 122499 Blast hits to 32804 proteins in 1196 species: Archae - 55; Bacteria - 8957; Metazoa - 28470; Fungi - 1471; Plants - 73451; Viruses - 13; Other Eukaryotes - 10082 (source: NCBI BLink). & (p93194|rpk1_iponi : 189.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 113.0) no description available & (reliability: 710.0) & (original description: Putative vdr3, Description = Verticillium wilt resistance-like protein, PFAM = PF00560;PF00560;PF13855;PF13855;PF13855;PF08263)' T '20.1.4' 'stress.biotic.kinases' 'niben044scf00031792ctg000_1-2723' '(at2g25470 : 207.0) receptor like protein 21 (RLP21); INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: hypocotyl; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 14 (TAIR:AT1G74180.1); Has 123339 Blast hits to 32686 proteins in 1192 species: Archae - 50; Bacteria - 9219; Metazoa - 30627; Fungi - 1506; Plants - 72809; Viruses - 37; Other Eukaryotes - 9091 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 174.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35665 : 98.6) no description available & (reliability: 374.0) & (original description: Putative PGSC0003DMG400023396, Description = Leucine-rich repeat receptor protein kinase EXS, putative, PFAM = PF13855;PF13855;PF13855)' T '20.1.4' 'stress.biotic.kinases' 'niben101scf00963_160541-165348' '(at4g13920 : 322.0) receptor like protein 50 (RLP50); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 47 (TAIR:AT4G13810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 176.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 114.0) no description available & (reliability: 622.0) & (original description: Putative Ve1, Description = Verticillium wilt disease resistance protein, PFAM = PF13855;PF13855;PF13855;PF08263)' T '20.1.4' 'stress.biotic.kinases' 'niben101scf01119_193328-195239' '(at3g11010 : 189.0) receptor like protein 34 (RLP34); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 53 (TAIR:AT5G27060.1); Has 142392 Blast hits to 33789 proteins in 1239 species: Archae - 73; Bacteria - 11207; Metazoa - 34063; Fungi - 1634; Plants - 83633; Viruses - 34; Other Eukaryotes - 11748 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 103.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 358.0) & (original description: Putative glysoja_038557, Description = Receptor-like protein 12, PFAM = PF13855)' T '20.1.4' 'stress.biotic.kinases' 'niben101scf03925_203933-207326' '(at3g05660 : 88.2) receptor like protein 33 (RLP33); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 32 (TAIR:AT3G05650.1); Has 122499 Blast hits to 32804 proteins in 1196 species: Archae - 55; Bacteria - 8957; Metazoa - 28470; Fungi - 1471; Plants - 73451; Viruses - 13; Other Eukaryotes - 10082 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative Eix1, Description = EIX receptor 1, PFAM = PF00560;PF13855;PF08263)' T '20.1.5' 'stress.biotic.regulation of transcription' 'niben044scf00023308ctg001_5759-8889' '(gnl|cdd|66760 : 103.0) no description available & (at2g34830 : 84.3) member of WRKY Transcription Factor; Group II-e; WRKY DNA-binding protein 35 (WRKY35); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group Iie (InterPro:IPR017412); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 14 (TAIR:AT1G30650.1); Has 5047 Blast hits to 3028 proteins in 237 species: Archae - 0; Bacteria - 12; Metazoa - 64; Fungi - 63; Plants - 3289; Viruses - 0; Other Eukaryotes - 1619 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative WRKY5, Description = WRKY 5 transcription factor, PFAM = PF03106)' T '20.1.5' 'stress.biotic.regulation of transcription' 'niben101scf00493_26910-32432' '(at1g54130 : 906.0) RELA/SPOT homolog 3 (RSH3); FUNCTIONS IN: GTP diphosphokinase activity; INVOLVED IN: guanosine tetraphosphate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 2 (TAIR:AT3G14050.1); Has 13036 Blast hits to 12330 proteins in 2448 species: Archae - 4; Bacteria - 8654; Metazoa - 208; Fungi - 27; Plants - 218; Viruses - 4; Other Eukaryotes - 3921 (source: NCBI BLink). & (gnl|cdd|36372 : 675.0) no description available & (gnl|cdd|30665 : 412.0) no description available & (reliability: 1812.0) & (original description: Putative relA, Description = RelA homolog, PFAM = PF13328;PF04607)' T '20.1.5' 'stress.biotic.regulation of transcription' 'niben101scf01063_784781-794862' '(gnl|cdd|30665 : 190.0) no description available & (at1g54130 : 174.0) RELA/SPOT homolog 3 (RSH3); FUNCTIONS IN: GTP diphosphokinase activity; INVOLVED IN: guanosine tetraphosphate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 2 (TAIR:AT3G14050.1); Has 13036 Blast hits to 12330 proteins in 2448 species: Archae - 4; Bacteria - 8654; Metazoa - 208; Fungi - 27; Plants - 218; Viruses - 4; Other Eukaryotes - 3921 (source: NCBI BLink). & (gnl|cdd|36372 : 140.0) no description available & (reliability: 348.0) & (original description: Putative relA, Description = GTP pyrophosphokinase, PFAM = PF04607;PF13328;PF02824)' T '20.1.5' 'stress.biotic.regulation of transcription' 'niben101scf02499_257663-260403' '(at5g56270 : 113.0) WRKY transcription factor 2; WRKY DNA-binding protein 2 (WRKY2); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 34 (TAIR:AT4G26440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 108.0) no description available & (reliability: 216.0) & (original description: Putative WRKY79, Description = WRKY transcription factor, PFAM = PF03106)' T '20.1.5' 'stress.biotic.regulation of transcription' 'niben101scf02749_335867-341584' '(at1g54130 : 900.0) RELA/SPOT homolog 3 (RSH3); FUNCTIONS IN: GTP diphosphokinase activity; INVOLVED IN: guanosine tetraphosphate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 2 (TAIR:AT3G14050.1); Has 13036 Blast hits to 12330 proteins in 2448 species: Archae - 4; Bacteria - 8654; Metazoa - 208; Fungi - 27; Plants - 218; Viruses - 4; Other Eukaryotes - 3921 (source: NCBI BLink). & (gnl|cdd|36372 : 680.0) no description available & (gnl|cdd|30665 : 415.0) no description available & (reliability: 1800.0) & (original description: Putative relA, Description = RelA homolog, PFAM = PF04607;PF13328)' T '20.1.5' 'stress.biotic.regulation of transcription' 'niben101scf03341_305526-327697' '(gnl|cdd|30665 : 189.0) no description available & (at1g54130 : 176.0) RELA/SPOT homolog 3 (RSH3); FUNCTIONS IN: GTP diphosphokinase activity; INVOLVED IN: guanosine tetraphosphate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 2 (TAIR:AT3G14050.1); Has 13036 Blast hits to 12330 proteins in 2448 species: Archae - 4; Bacteria - 8654; Metazoa - 208; Fungi - 27; Plants - 218; Viruses - 4; Other Eukaryotes - 3921 (source: NCBI BLink). & (gnl|cdd|36372 : 141.0) no description available & (reliability: 352.0) & (original description: Putative relA, Description = GTP pyrophosphokinase, PFAM = PF13328;PF04607;PF02824)' T '20.1.5' 'stress.biotic.regulation of transcription' 'niben101scf04000_238011-241132' '(gnl|cdd|66760 : 102.0) no description available & (at2g34830 : 83.2) member of WRKY Transcription Factor; Group II-e; WRKY DNA-binding protein 35 (WRKY35); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group Iie (InterPro:IPR017412); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 14 (TAIR:AT1G30650.1); Has 5047 Blast hits to 3028 proteins in 237 species: Archae - 0; Bacteria - 12; Metazoa - 64; Fungi - 63; Plants - 3289; Viruses - 0; Other Eukaryotes - 1619 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative WRKY65, Description = WRKY transcription factor 65, PFAM = PF03106)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold4045_1-5209' '(gnl|cdd|39857 : 342.0) no description available & (at1g53350 : 269.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|85132 : 245.0) no description available & (reliability: 538.0) & (original description: Putative PGSC0003DMG400007462, Description = NRC2a, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold8423_1689-4210' '(p11670|prb1_tobac : 350.0) Basic form of pathogenesis-related protein 1 precursor (PRP 1) - Nicotiana tabacum (Common tobacco) & (at4g33720 : 203.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: basic pathogenesis-related protein 1 (TAIR:AT2G14580.1); Has 3131 Blast hits to 3024 proteins in 381 species: Archae - 0; Bacteria - 70; Metazoa - 1690; Fungi - 339; Plants - 919; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|29108 : 155.0) no description available & (gnl|cdd|38227 : 123.0) no description available & (reliability: 396.0) & (original description: Putative pr1b, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold9634_34156-36725' '(at1g65870 : 194.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: cell wall; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G22900.1); Has 912 Blast hits to 910 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 912; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 155.0) no description available & (reliability: 388.0) & (original description: Putative DIR21, Description = Dirigent protein 21, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold9878_38339-48688' '(at5g36930 : 340.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85544 : 123.0) no description available & (gnl|cdd|39857 : 98.1) no description available & (reliability: 680.0) & (original description: Putative HD20, Description = HD domain class transcription factor, PFAM = PF00931;PF01582)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold15664_27828-30905' '(at1g72840 : 144.0) Disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: ovule, embryo, sperm cell, root, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G48770.1). & (gnl|cdd|85544 : 110.0) no description available & (reliability: 274.0) & (original description: Putative nl25, Description = TIR-NBS disease resistance-like protein, PFAM = PF01582)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold23510_4986-9267' '(gnl|cdd|39857 : 259.0) no description available & (gnl|cdd|85132 : 177.0) no description available & (at1g50180 : 169.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative PGSC0003DMG400004873, Description = NBS-LRR class resistance protein Fy12-Ry1, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold24704_1-29236' '(at5g17680 : 471.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85544 : 127.0) no description available & (gnl|cdd|39857 : 108.0) no description available & (reliability: 942.0) & (original description: Putative HD8, Description = TIR-NBS-LRR-TIR type disease resistance protein, PFAM = PF00931;PF01582)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold28669_1853-8694' '(gnl|cdd|39857 : 284.0) no description available & (gnl|cdd|85132 : 255.0) no description available & (at3g46530 : 218.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative NBS391R, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold36705_16541-19542' '(at5g17680 : 158.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85544 : 131.0) no description available & (reliability: 316.0) & (original description: Putative nl25, Description = TIR-NBS disease resistance-like protein, PFAM = PF01582)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold40882_1-3089' '(p29060|chia_tobac : 456.0) Acidic endochitinase precursor (EC 3.2.1.14) - Nicotiana tabacum (Common tobacco) & (at5g24090 : 313.0) Chitinase A (class III) expressed exclusively under environmental stress conditions.; chitinase A (CHIA); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to salt stress, response to cold, cellular response to water deprivation, response to wounding, response to light intensity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, chitinase active site (InterPro:IPR001579), Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39899 : 255.0) no description available & (gnl|cdd|84965 : 100.0) no description available & (reliability: 626.0) & (original description: Putative achi, Description = Acidic endochitinase, PFAM = PF00704)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold46713_1-2367' '(at1g35710 : 137.0) Protein kinase family protein with leucine-rich repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT4G08850.1); Has 304074 Blast hits to 147448 proteins in 4766 species: Archae - 178; Bacteria - 29187; Metazoa - 106993; Fungi - 12531; Plants - 120860; Viruses - 430; Other Eukaryotes - 33895 (source: NCBI BLink). & (p93194|rpk1_iponi : 128.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 91.6) no description available & (reliability: 254.0) & (original description: Putative PGSC0003DMG400004164, Description = Non-specific serine/threonine protein kinase, PFAM = PF00560;PF13855;PF13855)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold64516_1-3648' '(gnl|cdd|39857 : 202.0) no description available & (gnl|cdd|85132 : 195.0) no description available & (at1g53350 : 161.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative RGA88, Description = NBS-coding resistance protein, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold82183_1-4645' '(gnl|cdd|39857 : 291.0) no description available & (gnl|cdd|85132 : 240.0) no description available & (at1g50180 : 231.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative rx, Description = Rx protein, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold84765_1-2913' '(gnl|cdd|39857 : 274.0) no description available & (gnl|cdd|85132 : 230.0) no description available & (at3g07040 : 210.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (reliability: 406.0) & (original description: Putative NBS173-3, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.3scaffold94495_1988-4406' '(at1g27180 : 90.9) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: transmembrane receptors;ATP binding (TAIR:AT1G27170.1); Has 83534 Blast hits to 33450 proteins in 1183 species: Archae - 68; Bacteria - 4700; Metazoa - 16188; Fungi - 1127; Plants - 56869; Viruses - 12; Other Eukaryotes - 4570 (source: NCBI BLink). & (gnl|cdd|85544 : 80.7) no description available & (reliability: 181.8) & (original description: Putative muRdr1B, Description = TMV resistance protein N, PFAM = PF01582)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold83_724911-728026' '(at1g07730 : 223.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT2G28670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66675 : 133.0) no description available & (reliability: 446.0) & (original description: Putative DIR25, Description = Dirigent protein 25, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold191_21707-27143' '(at1g47890 : 392.0) receptor like protein 7 (RLP7); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 6 (TAIR:AT1G45616.1); Has 144165 Blast hits to 35486 proteins in 1317 species: Archae - 51; Bacteria - 13451; Metazoa - 35189; Fungi - 1938; Plants - 82186; Viruses - 41; Other Eukaryotes - 11309 (source: NCBI BLink). & (p93194|rpk1_iponi : 197.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 123.0) no description available & (reliability: 784.0) & (original description: Putative vdr3, Description = Leucine-rich-repeat receptor-like protein, PFAM = PF13855;PF13855;PF13855;PF13855;PF08263)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold467_912576-919487' '(at2g34930 : 296.0) disease resistance family protein / LRR family protein; INVOLVED IN: signal transduction, defense response to fungus, defense response; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 135121 Blast hits to 32840 proteins in 1181 species: Archae - 56; Bacteria - 8201; Metazoa - 34800; Fungi - 1569; Plants - 79859; Viruses - 2; Other Eukaryotes - 10634 (source: NCBI BLink). & (p93194|rpk1_iponi : 164.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35693 : 106.0) no description available & (reliability: 592.0) & (original description: Putative PGSC0003DMG400030561, Description = , PFAM = PF00560;PF13855;PF13855;PF13855;PF08263)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold665_374347-430871' '(at1g58170 : 157.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT5G49040.1); Has 838 Blast hits to 837 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 838; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 138.0) no description available & (reliability: 314.0) & (original description: Putative DIR19, Description = Dirigent protein 19, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold841_570863-596941' '(p29060|chia_tobac : 402.0) Acidic endochitinase precursor (EC 3.2.1.14) - Nicotiana tabacum (Common tobacco) & (at5g24090 : 263.0) Chitinase A (class III) expressed exclusively under environmental stress conditions.; chitinase A (CHIA); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to salt stress, response to cold, cellular response to water deprivation, response to wounding, response to light intensity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, chitinase active site (InterPro:IPR001579), Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39899 : 212.0) no description available & (reliability: 526.0) & (original description: Putative achi, Description = Acidic endochitinase, PFAM = PF00704)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold1064_274119-278114' '(gnl|cdd|39857 : 232.0) no description available & (gnl|cdd|85132 : 215.0) no description available & (at3g46530 : 179.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative R1, Description = R1, PFAM = PF12061;PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold1194_141492-146299' '(at3g05660 : 362.0) receptor like protein 33 (RLP33); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 32 (TAIR:AT3G05650.1); Has 122499 Blast hits to 32804 proteins in 1196 species: Archae - 55; Bacteria - 8957; Metazoa - 28470; Fungi - 1471; Plants - 73451; Viruses - 13; Other Eukaryotes - 10082 (source: NCBI BLink). & (p93194|rpk1_iponi : 185.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 114.0) no description available & (reliability: 724.0) & (original description: Putative vdr3, Description = Receptor-like protein 12, PFAM = PF13855;PF13855;PF13855;PF08263)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold1194_204190-208970' '(at3g05660 : 355.0) receptor like protein 33 (RLP33); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 32 (TAIR:AT3G05650.1); Has 122499 Blast hits to 32804 proteins in 1196 species: Archae - 55; Bacteria - 8957; Metazoa - 28470; Fungi - 1471; Plants - 73451; Viruses - 13; Other Eukaryotes - 10082 (source: NCBI BLink). & (p93194|rpk1_iponi : 189.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 113.0) no description available & (reliability: 704.0) & (original description: Putative vdr3, Description = Verticillium wilt resistance-like protein, PFAM = PF00560;PF00560;PF13855;PF13855;PF13855;PF08263)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold1207_277143-285314' '(gnl|cdd|39857 : 251.0) no description available & (at3g14470 : 235.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: protein binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT3G14460.1); Has 25652 Blast hits to 19792 proteins in 681 species: Archae - 38; Bacteria - 1467; Metazoa - 4997; Fungi - 304; Plants - 18213; Viruses - 0; Other Eukaryotes - 633 (source: NCBI BLink). & (gnl|cdd|85132 : 155.0) no description available & (reliability: 470.0) & (original description: Putative MtrDRAFT_AC155880g13v2, Description = Disease resistance protein, PFAM = PF00931;PF13855)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold1313_337009-342854' '(gnl|cdd|39857 : 269.0) no description available & (gnl|cdd|85132 : 247.0) no description available & (at3g46530 : 215.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative NBS391R, Description = NBS-coding resistance gene analog, PFAM = PF13499;PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold3234_98696-108045' '(at5g17680 : 555.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39857 : 179.0) no description available & (gnl|cdd|85132 : 144.0) no description available & (reliability: 1110.0) & (original description: Putative nl27, Description = NL27, PFAM = PF01582;PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold3511_15576-21770' '(at5g17680 : 403.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39857 : 127.0) no description available & (gnl|cdd|85544 : 126.0) no description available & (reliability: 806.0) & (original description: Putative R4, Description = Putative TIR-NBS type R protein 4, PFAM = PF00931;PF01582)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold3511_15588-21296' '(at5g17680 : 378.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39857 : 126.0) no description available & (gnl|cdd|85544 : 126.0) no description available & (reliability: 756.0) & (original description: Putative rj2, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF01582;PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold3524_82925-86523' '(at5g20480 : 150.0) Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.; EF-TU receptor (EFR); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47090.1); Has 211073 Blast hits to 132033 proteins in 4602 species: Archae - 167; Bacteria - 19808; Metazoa - 69159; Fungi - 9873; Plants - 87247; Viruses - 333; Other Eukaryotes - 24486 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 132.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35665 : 91.6) no description available & (reliability: 284.0) & (original description: Putative PGSC0003DMG400007611, Description = Non-specific serine/threonine protein kinase, PFAM = PF08263;PF13855;PF13855)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold4024_57052-63156' '(gnl|cdd|39857 : 262.0) no description available & (at5g35450 : 208.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 207.0) no description available & (reliability: 416.0) & (original description: Putative RGA88, Description = Putative ovule protein, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold6136_104599-109033' '(at4g23440 : 655.0) Disease resistance protein (TIR-NBS class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, innate immune response; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G56220.1); Has 636 Blast hits to 617 proteins in 139 species: Archae - 3; Bacteria - 309; Metazoa - 6; Fungi - 123; Plants - 176; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 1310.0) & (original description: Putative At4g23440, Description = Disease resistance protein (TIR-NBS class), PFAM = )' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold7331_5906-23942' '(at5g35450 : 193.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39857 : 147.0) no description available & (gnl|cdd|85132 : 90.7) no description available & (reliability: 386.0) & (original description: Putative PGSC0003DMG400013407, Description = , PFAM = PF00931;PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'nbv0.5scaffold9200_1600-14766' '(gnl|cdd|39857 : 303.0) no description available & (gnl|cdd|85132 : 235.0) no description available & (at3g46530 : 198.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative help3, Description = Hero resistance protein 3 homologue, PFAM = PF00931;PF01419;PF01419;PF01419)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044ctg26216047_1594-4718' '(at1g07730 : 220.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT2G28670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66675 : 133.0) no description available & (reliability: 440.0) & (original description: Putative DIR9, Description = Disease resistance-responsive family protein, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00000307ctg000_3233-5784' '(p07053|pr1b_tobac : 322.0) Pathogenesis-related protein 1B precursor (PR-1B) - Nicotiana tabacum (Common tobacco) & (at2g14580 : 192.0) pathogenesis related protein, encodes a basic PR1-like protein. Expresses in flowers, roots, and not in leaves and responses to ethylene and methyl jasmonate. Salicylic acid represses gene expression.; basic pathogenesis-related protein 1 (PRB1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to ethylene stimulus, response to jasmonic acid stimulus, response to salicylic acid stimulus; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: shoot, shoot apex, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: pathogenesis-related gene 1 (TAIR:AT2G14610.1); Has 3181 Blast hits to 3075 proteins in 384 species: Archae - 0; Bacteria - 66; Metazoa - 1736; Fungi - 341; Plants - 911; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|29108 : 160.0) no description available & (gnl|cdd|38227 : 127.0) no description available & (reliability: 384.0) & (original description: Putative pr1, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00001169ctg048_1-2133' '(at3g46730 : 162.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46530.1); Has 14658 Blast hits to 14197 proteins in 483 species: Archae - 6; Bacteria - 489; Metazoa - 440; Fungi - 102; Plants - 13534; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|39857 : 153.0) no description available & (reliability: 324.0) & (original description: Putative PGSC0003DMG400006531, Description = Disease resistance protein RPP8, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00001621ctg000_1-5099' '(at5g17680 : 527.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 135.0) no description available & (gnl|cdd|39857 : 106.0) no description available & (reliability: 1054.0) & (original description: Putative nl27, Description = NL27, PFAM = PF01582;PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00002905ctg007_11371-16001' '(gnl|cdd|39857 : 271.0) no description available & (gnl|cdd|85132 : 262.0) no description available & (at3g46730 : 204.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46530.1); Has 14658 Blast hits to 14197 proteins in 483 species: Archae - 6; Bacteria - 489; Metazoa - 440; Fungi - 102; Plants - 13534; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative Sw-5, Description = Tomato spotted wilt virus resistance protein, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00002927ctg008_1925-8541' '(p51614|chit3_vitvi : 394.0) Acidic endochitinase precursor (EC 3.2.1.14) - Vitis vinifera (Grape) & (at5g24090 : 393.0) Chitinase A (class III) expressed exclusively under environmental stress conditions.; chitinase A (CHIA); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to salt stress, response to cold, cellular response to water deprivation, response to wounding, response to light intensity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, chitinase active site (InterPro:IPR001579), Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39899 : 334.0) no description available & (gnl|cdd|47549 : 169.0) no description available & (reliability: 786.0) & (original description: Putative CHIB1, Description = Acidic endochitinase, PFAM = PF07714;PF00704)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00003205ctg010_7639-10661' '(at3g14470 : 118.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: protein binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT3G14460.1); Has 25652 Blast hits to 19792 proteins in 681 species: Archae - 38; Bacteria - 1467; Metazoa - 4997; Fungi - 304; Plants - 18213; Viruses - 0; Other Eukaryotes - 633 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative I2, Description = Disease resistance protein R3a-like protein, PFAM = )' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00004388ctg037_425-3909' '(at3g24240 : 134.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT5G48940.1); Has 246558 Blast hits to 135557 proteins in 3810 species: Archae - 176; Bacteria - 24262; Metazoa - 71588; Fungi - 10499; Plants - 111580; Viruses - 361; Other Eukaryotes - 28092 (source: NCBI BLink). & (p93194|rpk1_iponi : 129.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 94.3) no description available & (reliability: 244.0) & (original description: Putative PGSC0003DMG400001016, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF13516)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00004418ctg003_8278-11985' '(at3g24020 : 280.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT4G13580.1); Has 723 Blast hits to 722 proteins in 40 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 719; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 129.0) no description available & (reliability: 560.0) & (original description: Putative DIR16, Description = Dirigent protein 16, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00004802ctg003_1-3129' '(gnl|cdd|39857 : 185.0) no description available & (gnl|cdd|85132 : 178.0) no description available & (at3g07040 : 166.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative PGSC0003DMG400025259, Description = NBS resistance protein RGA49, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00005464ctg007_6316-10179' '(gnl|cdd|39857 : 270.0) no description available & (gnl|cdd|85132 : 260.0) no description available & (at1g50180 : 207.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative BS2, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00005464ctg007_7864-10436' '(gnl|cdd|85132 : 259.0) no description available & (gnl|cdd|39857 : 249.0) no description available & (at1g50180 : 188.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative NBS390, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00006274ctg015_1-4294' '(gnl|cdd|39857 : 287.0) no description available & (gnl|cdd|85132 : 235.0) no description available & (at1g59218 : 208.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58848.2). & (reliability: 416.0) & (original description: Putative NBS173-3, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00008770ctg004_1401-3888' '(at5g17680 : 178.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85544 : 136.0) no description available & (reliability: 356.0) & (original description: Putative HD22, Description = HD domain class transcription factor, PFAM = PF01582)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00009821ctg009_1-1823' '(at5g17680 : 171.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85544 : 125.0) no description available & (reliability: 342.0) & (original description: Putative NBS1, Description = TIR-NBS-LRR type disease resistance protein, PFAM = PF01582)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00009911ctg013_2363-8388' '(at3g14470 : 568.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: protein binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT3G14460.1); Has 25652 Blast hits to 19792 proteins in 681 species: Archae - 38; Bacteria - 1467; Metazoa - 4997; Fungi - 304; Plants - 18213; Viruses - 0; Other Eukaryotes - 633 (source: NCBI BLink). & (gnl|cdd|39857 : 340.0) no description available & (gnl|cdd|85132 : 317.0) no description available & (reliability: 1136.0) & (original description: Putative N', Description = N' tobamovirus resistance protein, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00010763ctg010_14428-17748' '(at1g65870 : 157.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: cell wall; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G22900.1); Has 912 Blast hits to 910 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 912; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 142.0) no description available & (reliability: 314.0) & (original description: Putative DIR19, Description = Dirigent protein 19, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00012189ctg010_702-2599' '(at3g14470 : 139.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: protein binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT3G14460.1); Has 25652 Blast hits to 19792 proteins in 681 species: Archae - 38; Bacteria - 1467; Metazoa - 4997; Fungi - 304; Plants - 18213; Viruses - 0; Other Eukaryotes - 633 (source: NCBI BLink). & (gnl|cdd|85132 : 103.0) no description available & (gnl|cdd|39857 : 102.0) no description available & (reliability: 278.0) & (original description: Putative I2, Description = I2, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00014844ctg020_3538-5969' '(at5g17680 : 95.9) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47584 : 86.6) no description available & (reliability: 191.8) & (original description: Putative HD17, Description = TIR-NBS type disease resistance protein, PFAM = PF01582)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00015188ctg000_23841-26313' '(at5g17680 : 110.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47584 : 96.6) no description available & (reliability: 220.0) & (original description: Putative CN, Description = TMV resistance protein N, PFAM = PF01582)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00016110ctg008_1-2168' '(p29061|chib_tobac : 311.0) Basic endochitinase precursor (EC 3.2.1.14) - Nicotiana tabacum (Common tobacco) & (at5g24090 : 176.0) Chitinase A (class III) expressed exclusively under environmental stress conditions.; chitinase A (CHIA); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to salt stress, response to cold, cellular response to water deprivation, response to wounding, response to light intensity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, chitinase active site (InterPro:IPR001579), Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39899 : 158.0) no description available & (reliability: 352.0) & (original description: Putative achi, Description = Acidic endochitinase, PFAM = PF00704)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00016992ctg005_172-4778' '(gnl|cdd|39857 : 143.0) no description available & (at1g50180 : 132.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|85132 : 99.0) no description available & (reliability: 264.0) & (original description: Putative CN, Description = Putative ovule protein, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00018239ctg001_2702-10661' '(gnl|cdd|39857 : 281.0) no description available & (gnl|cdd|85132 : 242.0) no description available & (at1g50180 : 200.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 400.0) & (original description: Putative help3, Description = Hero resistance protein 3 homologue, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00018802ctg003_4920-10401' '(at1g47890 : 388.0) receptor like protein 7 (RLP7); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 6 (TAIR:AT1G45616.1); Has 144165 Blast hits to 35486 proteins in 1317 species: Archae - 51; Bacteria - 13451; Metazoa - 35189; Fungi - 1938; Plants - 82186; Viruses - 41; Other Eukaryotes - 11309 (source: NCBI BLink). & (p93194|rpk1_iponi : 187.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 112.0) no description available & (reliability: 776.0) & (original description: Putative vdr3, Description = Leucine-rich-repeat receptor-like protein, PFAM = PF13855;PF13855;PF08263;PF00560)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00019156ctg002_343-2100' '(at2g15080 : 95.5) receptor like protein 19 (RLP19); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 53 (TAIR:AT5G27060.1); Has 148753 Blast hits to 34404 proteins in 1310 species: Archae - 57; Bacteria - 11889; Metazoa - 32225; Fungi - 1644; Plants - 90370; Viruses - 42; Other Eukaryotes - 12526 (source: NCBI BLink). & (reliability: 191.0) & (original description: Putative vdr3, Description = Receptor-like protein 12, PFAM = PF13516;PF08263)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00019248ctg004_1-873' '(gnl|cdd|85132 : 179.0) no description available & (gnl|cdd|39857 : 145.0) no description available & (at1g50180 : 133.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative PGSC0003DMG400020740, Description = NBS-coding resistance protein-like protein RGA11, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00019530ctg009_1-5071' '(at2g34930 : 280.0) disease resistance family protein / LRR family protein; INVOLVED IN: signal transduction, defense response to fungus, defense response; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 135121 Blast hits to 32840 proteins in 1181 species: Archae - 56; Bacteria - 8201; Metazoa - 34800; Fungi - 1569; Plants - 79859; Viruses - 2; Other Eukaryotes - 10634 (source: NCBI BLink). & (p93194|rpk1_iponi : 187.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 108.0) no description available & (reliability: 560.0) & (original description: Putative PGSC0003DMG400023396, Description = Leucine-rich repeat receptor protein kinase EXS, putative, PFAM = PF13855;PF13855;PF13855;PF13855;PF00560;PF08263;PF13516)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00021168ctg005_2643-5352' '(at5g48770 : 200.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT1G72840.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85544 : 124.0) no description available & (reliability: 400.0) & (original description: Putative rj2, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF01582;PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00021476ctg004_3710-10502' '(at5g36930 : 558.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39857 : 165.0) no description available & (gnl|cdd|85544 : 132.0) no description available & (reliability: 1116.0) & (original description: Putative glysoja_000381, Description = TMV resistance protein N, PFAM = PF01582;PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00021476ctg004_8022-10128' '(at4g12010 : 93.6) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT4G19510.1); Has 31049 Blast hits to 21052 proteins in 960 species: Archae - 20; Bacteria - 2553; Metazoa - 5096; Fungi - 331; Plants - 21936; Viruses - 4; Other Eukaryotes - 1109 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative KR1, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00021599ctg011_2429-7299' '(at4g04900 : 85.9) encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Most similar to RIC9 and RIC11 (subfamily group I). Gene is expressed predominantly in roots, leaves, and seedlings.; ROP-interactive CRIB motif-containing protein 10 (RIC10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen tube growth; LOCATED IN: cytoplasm; EXPRESSED IN: seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095); BEST Arabidopsis thaliana protein match is: PAK-box/P21-Rho-binding family protein (TAIR:AT4G21745.1); Has 685 Blast hits to 255 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 53; Fungi - 27; Plants - 173; Viruses - 0; Other Eukaryotes - 432 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative EFTS, Description = CRIB domain-containing protein RIC10, PFAM = PF00786)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00023299ctg001_10924-15008' '(gnl|cdd|39857 : 145.0) no description available & (at3g46730 : 103.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46530.1); Has 14658 Blast hits to 14197 proteins in 483 species: Archae - 6; Bacteria - 489; Metazoa - 440; Fungi - 102; Plants - 13534; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|85132 : 86.9) no description available & (reliability: 206.0) & (original description: Putative , Description = , PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00024406ctg001_14887-19582' '(gnl|cdd|39857 : 276.0) no description available & (gnl|cdd|85132 : 253.0) no description available & (at3g50950 : 208.0) HOPZ-ACTIVATED RESISTANCE 1 (ZAR1); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 15477 Blast hits to 13963 proteins in 472 species: Archae - 2; Bacteria - 362; Metazoa - 212; Fungi - 129; Plants - 14652; Viruses - 8; Other Eukaryotes - 112 (source: NCBI BLink). & (reliability: 416.0) & (original description: Putative NBS391R, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00024857ctg001_1137-6480' '(gnl|cdd|39857 : 417.0) no description available & (at3g46530 : 412.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|85132 : 253.0) no description available & (reliability: 800.0) & (original description: Putative RPP13, Description = Disease resistance protein RPP13 variant, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00025611ctg002_3035-6492' '(at1g27180 : 255.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: transmembrane receptors;ATP binding (TAIR:AT1G27170.1); Has 83534 Blast hits to 33450 proteins in 1183 species: Archae - 68; Bacteria - 4700; Metazoa - 16188; Fungi - 1127; Plants - 56869; Viruses - 12; Other Eukaryotes - 4570 (source: NCBI BLink). & (reliability: 510.0) & (original description: Putative At1g27170, Description = Disease resistance protein (TIR-NBS-LRR class), putative, PFAM = )' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00026128ctg004_1139-6034' '(gnl|cdd|39857 : 271.0) no description available & (gnl|cdd|85132 : 242.0) no description available & (at3g46530 : 215.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative SW5F, Description = Putative ovule protein, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00026706ctg004_1404-7473' '(gnl|cdd|39857 : 344.0) no description available & (at5g35450 : 269.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 243.0) no description available & (reliability: 538.0) & (original description: Putative PGSC0003DMG400007462, Description = NRC2a, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00028827ctg001_10315-15546' '(gnl|cdd|39857 : 288.0) no description available & (gnl|cdd|85132 : 250.0) no description available & (at3g46530 : 230.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative PGSC0003DMG400005170, Description = Putative ovule protein, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00030171ctg011_5117-8241' '(at1g72840 : 144.0) Disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: ovule, embryo, sperm cell, root, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G48770.1). & (gnl|cdd|85544 : 109.0) no description available & (reliability: 274.0) & (original description: Putative nl25, Description = TIR-NBS disease resistance-like protein, PFAM = PF01582)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00031792ctg000_1-2723' '(at2g25470 : 207.0) receptor like protein 21 (RLP21); INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: hypocotyl; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 14 (TAIR:AT1G74180.1); Has 123339 Blast hits to 32686 proteins in 1192 species: Archae - 50; Bacteria - 9219; Metazoa - 30627; Fungi - 1506; Plants - 72809; Viruses - 37; Other Eukaryotes - 9091 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 174.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35665 : 98.6) no description available & (reliability: 400.0) & (original description: Putative PGSC0003DMG400023396, Description = Leucine-rich repeat receptor protein kinase EXS, putative, PFAM = PF13855;PF13855;PF13855)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00032590ctg000_713-2472' '(at1g74190 : 112.0) receptor like protein 15 (RLP15); INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 13 (TAIR:AT1G74170.1); Has 128946 Blast hits to 31204 proteins in 1189 species: Archae - 49; Bacteria - 10411; Metazoa - 29723; Fungi - 1446; Plants - 77583; Viruses - 38; Other Eukaryotes - 9696 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 89.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 212.0) & (original description: Putative Eix1, Description = Receptor-like protein, PFAM = PF13516;PF12799;PF00560)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00040944ctg007_2406-7951' '(at5g35450 : 192.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39857 : 147.0) no description available & (gnl|cdd|85132 : 90.7) no description available & (reliability: 384.0) & (original description: Putative PGSC0003DMG400013407, Description = , PFAM = PF00931;PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00042921ctg000_1-2002' '(at1g27170 : 101.0) transmembrane receptors;ATP binding; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT1G27180.1); Has 88149 Blast hits to 36022 proteins in 1268 species: Archae - 44; Bacteria - 5525; Metazoa - 17765; Fungi - 1406; Plants - 58458; Viruses - 8; Other Eukaryotes - 4943 (source: NCBI BLink). & (reliability: 199.6) & (original description: Putative KR1, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00043361ctg000_1-3295' '(at1g69550 : 117.0) disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 8455 Blast hits to 8197 proteins in 261 species: Archae - 0; Bacteria - 113; Metazoa - 3; Fungi - 4; Plants - 8303; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative PGSC0003DMG400024055, Description = , PFAM = )' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00045592ctg002_1-3970' '(gnl|cdd|39857 : 386.0) no description available & (at1g50180 : 377.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|85132 : 260.0) no description available & (reliability: 754.0) & (original description: Putative PGSC0003DMG400008306, Description = NBS resistance protein RGA50, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00049206ctg001_1-2476' '(at1g07730 : 232.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT2G28670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66675 : 126.0) no description available & (reliability: 464.0) & (original description: Putative DIR25, Description = Dirigent protein 25, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00049718ctg002_2328-4997' '(at2g39430 : 215.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, hypocotyl, root, petiole, leaf; EXPRESSED DURING: LP.04 four leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT3G55230.1); Has 728 Blast hits to 728 proteins in 43 species: Archae - 2; Bacteria - 4; Metazoa - 2; Fungi - 4; Plants - 715; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66675 : 126.0) no description available & (reliability: 430.0) & (original description: Putative BnaC04g46330D, Description = BnaC04g46330D protein, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben044scf00053594ctg002_1-2876' '(at3g47090 : 182.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 208488 Blast hits to 131556 proteins in 4837 species: Archae - 167; Bacteria - 21304; Metazoa - 66210; Fungi - 9769; Plants - 86245; Viruses - 308; Other Eukaryotes - 24485 (source: NCBI BLink). & (p93194|rpk1_iponi : 158.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 83.2) no description available & (reliability: 344.0) & (original description: Putative TCM_031965, Description = Serine-threonine protein kinase, PFAM = PF00560;PF08263;PF13855;PF13855)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00152_619451-622015' '(at4g36180 : 87.4) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT1G75640.1); Has 274404 Blast hits to 147338 proteins in 4291 species: Archae - 207; Bacteria - 28458; Metazoa - 89754; Fungi - 12028; Plants - 112070; Viruses - 470; Other Eukaryotes - 31417 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative At1g25320, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF00560)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00168_377573-379315' '(at3g56100 : 91.7) Protein kinase expressed in meristematic cells. Phosphorylates AGL24.; meristematic receptor-like kinase (MRLK); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: inflorescence meristem receptor-like kinase 2 (TAIR:AT3G51740.1); Has 154347 Blast hits to 110289 proteins in 3296 species: Archae - 124; Bacteria - 13554; Metazoa - 45622; Fungi - 8090; Plants - 69121; Viruses - 344; Other Eukaryotes - 17492 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative PGSC0003DMG400005590, Description = Receptor like protein 15, putative, PFAM = PF00560;PF00560)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00269_2191-8376' '(at5g36930 : 469.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39857 : 150.0) no description available & (gnl|cdd|85544 : 128.0) no description available & (reliability: 938.0) & (original description: Putative PGSC0003DMG400020935, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF00931;PF01582)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00269_2665-8415' '(at5g17680 : 378.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85544 : 126.0) no description available & (gnl|cdd|39857 : 125.0) no description available & (reliability: 756.0) & (original description: Putative R4, Description = Putative TIR-NBS type R protein 4, PFAM = PF01582;PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00269_63181-129482' '(at5g36930 : 372.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39857 : 132.0) no description available & (gnl|cdd|85544 : 129.0) no description available & (reliability: 744.0) & (original description: Putative PGSC0003DMG400007743, Description = Putative TMV resistance protein N-like, PFAM = PF01582;PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00269_124273-126757' '(at1g27170 : 103.0) transmembrane receptors;ATP binding; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT1G27180.1); Has 88149 Blast hits to 36022 proteins in 1268 species: Archae - 44; Bacteria - 5525; Metazoa - 17765; Fungi - 1406; Plants - 58458; Viruses - 8; Other Eukaryotes - 4943 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative KR1, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00269_124716-125811' '(at4g12010 : 95.1) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT4G19510.1); Has 31049 Blast hits to 21052 proteins in 960 species: Archae - 20; Bacteria - 2553; Metazoa - 5096; Fungi - 331; Plants - 21936; Viruses - 4; Other Eukaryotes - 1109 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative NBS1, Description = Disease resistance protein (TIR-NBS-LRR class), PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00447_16764-19663' '(p23472|chly_hevbr : 349.0) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14); Lysozyme (EC 3.2.1.17)] - Hevea brasiliensis (Para rubber tree) & (at5g24090 : 345.0) Chitinase A (class III) expressed exclusively under environmental stress conditions.; chitinase A (CHIA); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to salt stress, response to cold, cellular response to water deprivation, response to wounding, response to light intensity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, chitinase active site (InterPro:IPR001579), Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39899 : 282.0) no description available & (gnl|cdd|84965 : 98.3) no description available & (reliability: 690.0) & (original description: Putative chi3, Description = Chitinase, PFAM = PF00704)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00448_1874138-1876662' '(gnl|cdd|66675 : 105.0) no description available & (at2g21100 : 103.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G65870.1); Has 857 Blast hits to 856 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative TCM_028979, Description = Disease resistance-responsive family protein, putative, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00449_92995-96125' '(at2g39430 : 246.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, hypocotyl, root, petiole, leaf; EXPRESSED DURING: LP.04 four leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT3G55230.1); Has 728 Blast hits to 728 proteins in 43 species: Archae - 2; Bacteria - 4; Metazoa - 2; Fungi - 4; Plants - 715; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66675 : 127.0) no description available & (reliability: 492.0) & (original description: Putative BnaC04g46330D, Description = BnaC04g46330D protein, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00528_151185-154976' '(gnl|cdd|47535 : 256.0) no description available & (at1g18250 : 225.0) encodes a thaumatin-like protein; ATLP-1; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G73620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p83332|tlp1_prupe : 208.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 444.0) & (original description: Putative At1g18250, Description = Thaumatin-like protein, PFAM = PF00314)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00612_144827-148441' '(at3g24020 : 279.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT4G13580.1); Has 723 Blast hits to 722 proteins in 40 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 719; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 128.0) no description available & (reliability: 558.0) & (original description: Putative DIR16, Description = Dirigent protein 16, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00650_231412-238911' '(gnl|cdd|85132 : 311.0) no description available & (gnl|cdd|39857 : 290.0) no description available & (at1g59780 : 214.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root, flower, synergid; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58400.1); Has 16454 Blast hits to 15209 proteins in 528 species: Archae - 16; Bacteria - 828; Metazoa - 1085; Fungi - 125; Plants - 14178; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative Prf, Description = PRF, PFAM = PF00931;PF12061;PF12061)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00705_312867-324661' '(at5g36930 : 461.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39857 : 146.0) no description available & (gnl|cdd|85132 : 136.0) no description available & (reliability: 922.0) & (original description: Putative HD20, Description = HD domain class transcription factor, PFAM = PF00931;PF01582)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00705_313215-321986' '(at5g36930 : 227.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85132 : 133.0) no description available & (gnl|cdd|39857 : 110.0) no description available & (reliability: 454.0) & (original description: Putative HD20, Description = TMV resistance protein N, putative, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00761_645774-655160' '(gnl|cdd|39857 : 306.0) no description available & (at1g53350 : 243.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|85132 : 235.0) no description available & (reliability: 486.0) & (original description: Putative PGSC0003DMG400013486, Description = Disease resistance protein, putative, PFAM = PF00931;PF12061;PF12061)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00781_697373-701439' '(gnl|cdd|39857 : 301.0) no description available & (gnl|cdd|85132 : 262.0) no description available & (at1g50180 : 224.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative rx, Description = Disease resistance protein RGH5, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00781_699033-701850' '(gnl|cdd|85132 : 259.0) no description available & (gnl|cdd|39857 : 246.0) no description available & (at1g50180 : 192.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative rx, Description = Disease resistance protein, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00883_1597166-1599750' '(at2g21100 : 144.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G65870.1); Has 857 Blast hits to 856 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 133.0) no description available & (reliability: 288.0) & (original description: Putative DIR23, Description = Dirigent protein 23, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00953_300641-303196' '(p11670|prb1_tobac : 288.0) Basic form of pathogenesis-related protein 1 precursor (PRP 1) - Nicotiana tabacum (Common tobacco) & (at4g33720 : 184.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: basic pathogenesis-related protein 1 (TAIR:AT2G14580.1); Has 3131 Blast hits to 3024 proteins in 381 species: Archae - 0; Bacteria - 70; Metazoa - 1690; Fungi - 339; Plants - 919; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|29108 : 142.0) no description available & (gnl|cdd|38227 : 116.0) no description available & (reliability: 366.0) & (original description: Putative pr1b, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00953_315511-318632' '(p11670|prb1_tobac : 307.0) Basic form of pathogenesis-related protein 1 precursor (PRP 1) - Nicotiana tabacum (Common tobacco) & (at4g33720 : 199.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: basic pathogenesis-related protein 1 (TAIR:AT2G14580.1); Has 3131 Blast hits to 3024 proteins in 381 species: Archae - 0; Bacteria - 70; Metazoa - 1690; Fungi - 339; Plants - 919; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|29108 : 165.0) no description available & (gnl|cdd|38227 : 127.0) no description available & (reliability: 392.0) & (original description: Putative pr1, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00953_542627-545115' '(p11670|prb1_tobac : 205.0) Basic form of pathogenesis-related protein 1 precursor (PRP 1) - Nicotiana tabacum (Common tobacco) & (at1g50060 : 186.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT1G50050.1); Has 2790 Blast hits to 2723 proteins in 351 species: Archae - 0; Bacteria - 60; Metazoa - 1420; Fungi - 326; Plants - 897; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|29108 : 142.0) no description available & (gnl|cdd|38227 : 110.0) no description available & (reliability: 370.0) & (original description: Putative PR1B1, Description = Pathogenesis-related leaf protein 6, PFAM = PF00188)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00963_160541-165348' '(at4g13920 : 322.0) receptor like protein 50 (RLP50); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 47 (TAIR:AT4G13810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 176.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 114.0) no description available & (reliability: 644.0) & (original description: Putative Ve1, Description = Verticillium wilt disease resistance protein, PFAM = PF13855;PF13855;PF13855;PF08263)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00963_248745-252283' '(at4g13920 : 193.0) receptor like protein 50 (RLP50); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 47 (TAIR:AT4G13810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 141.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 90.1) no description available & (reliability: 386.0) & (original description: Putative vdr3, Description = Receptor-like protein 12, PFAM = PF08263;PF13855;PF13855)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00963_250566-253552' '(at5g40170 : 186.0) receptor like protein 54 (RLP54); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 27 (TAIR:AT2G33060.1); Has 95502 Blast hits to 27133 proteins in 1050 species: Archae - 52; Bacteria - 4975; Metazoa - 18576; Fungi - 1120; Plants - 63605; Viruses - 17; Other Eukaryotes - 7157 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 106.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 372.0) & (original description: Putative vdr3, Description = Receptor-like protein 12, PFAM = PF13855)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf00975_98677-103769' '(at2g34930 : 396.0) disease resistance family protein / LRR family protein; INVOLVED IN: signal transduction, defense response to fungus, defense response; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 135121 Blast hits to 32840 proteins in 1181 species: Archae - 56; Bacteria - 8201; Metazoa - 34800; Fungi - 1569; Plants - 79859; Viruses - 2; Other Eukaryotes - 10634 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 212.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35838 : 122.0) no description available & (reliability: 792.0) & (original description: Putative Eix2, Description = EIX receptor 2, PFAM = PF13516;PF13516;PF00560;PF00560;PF00560;PF08263;PF13855;PF13855;PF13855;PF13855)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01013_394038-403963' '(at4g14368 : 1196.0) Regulator of chromosome condensation (RCC1) family protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Pleckstrin homology-type (InterPro:IPR011993), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT3G23270.1); Has 23075 Blast hits to 9219 proteins in 606 species: Archae - 56; Bacteria - 2851; Metazoa - 9367; Fungi - 1087; Plants - 2969; Viruses - 60; Other Eukaryotes - 6685 (source: NCBI BLink). & (gnl|cdd|34783 : 133.0) no description available & (gnl|cdd|36640 : 111.0) no description available & (reliability: 2392.0) & (original description: Putative PRAF1, Description = Regulator of chromosome condensation and FYVE zinc finger domain-containing protein, PFAM = PF13713;PF08381;PF01363;PF16457;PF00415;PF00415;PF00415;PF00415;PF00415;PF00415)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01013_734995-802431' '(gnl|cdd|39857 : 106.0) no description available & (gnl|cdd|85132 : 105.0) no description available & (at3g46530 : 97.8) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative , Description = , PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01013_796881-800452' '(at1g58390 : 194.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, LP.08 eight leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58400.1); Has 14341 Blast hits to 13745 proteins in 491 species: Archae - 4; Bacteria - 531; Metazoa - 280; Fungi - 132; Plants - 13314; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|39857 : 188.0) no description available & (reliability: 388.0) & (original description: Putative PGSC0003DMG400013407, Description = , PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01013_838054-845165' '(gnl|cdd|39857 : 343.0) no description available & (gnl|cdd|85132 : 251.0) no description available & (at1g53350 : 247.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 494.0) & (original description: Putative PGSC0003DMG400007462, Description = NBS-LRR class resistance protein Fy2-Ry2, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01017_610120-615953' '(at1g53350 : 518.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|39857 : 497.0) no description available & (gnl|cdd|85132 : 260.0) no description available & (reliability: 1036.0) & (original description: Putative PGSC0003DMG400029344, Description = Disease resistance protein RPP13, putative, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01119_193328-195239' '(at3g11010 : 189.0) receptor like protein 34 (RLP34); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 53 (TAIR:AT5G27060.1); Has 142392 Blast hits to 33789 proteins in 1239 species: Archae - 73; Bacteria - 11207; Metazoa - 34063; Fungi - 1634; Plants - 83633; Viruses - 34; Other Eukaryotes - 11748 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 103.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 378.0) & (original description: Putative glysoja_038557, Description = Receptor-like protein 12, PFAM = PF13855)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01145_13490-18180' '(gnl|cdd|39857 : 324.0) no description available & (gnl|cdd|85132 : 260.0) no description available & (at5g43470 : 246.0) Confers resistance to Peronospora parasitica. In arabidopsis ecotype Dijon-17, HRT-mediated signaling is dependent on light for the induction of hypersensitive response and resistance to turnip crinkle virus.; RECOGNITION OF PERONOSPORA PARASITICA 8 (RPP8); FUNCTIONS IN: nucleotide binding; INVOLVED IN: defense response to virus, response to light stimulus, response to other organism, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative PGSC0003DMG400018462, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01214_313614-318333' '(gnl|cdd|39857 : 299.0) no description available & (gnl|cdd|85132 : 235.0) no description available & (at1g58390 : 231.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, LP.08 eight leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58400.1); Has 14341 Blast hits to 13745 proteins in 491 species: Archae - 4; Bacteria - 531; Metazoa - 280; Fungi - 132; Plants - 13314; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative NBS173-3, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01240_318263-322994' '(gnl|cdd|39857 : 320.0) no description available & (gnl|cdd|85132 : 254.0) no description available & (at1g50180 : 252.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 504.0) & (original description: Putative rx, Description = Rx protein, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01334_672768-676756' '(at3g17210 : 149.0) Encodes a heat stable protein with antimicrobial and antifungal activity.; heat stable protein 1 (HS1); INVOLVED IN: defense response to fungus, defense response to bacterium; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Stress responsive alpha-beta barrel (InterPro:IPR013097), Dimeric alpha-beta barrel (InterPro:IPR011008); BEST Arabidopsis thaliana protein match is: Stress responsive A/B Barrel Domain (TAIR:AT5G22580.1); Has 431 Blast hits to 430 proteins in 120 species: Archae - 0; Bacteria - 167; Metazoa - 0; Fungi - 40; Plants - 173; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (gnl|cdd|87390 : 95.8) no description available & (reliability: 298.0) & (original description: Putative HS1, Description = Stress-response A/B barrel domain-containing protein HS1, PFAM = PF07876)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01398_90211-94931' '(gnl|cdd|39857 : 269.0) no description available & (gnl|cdd|85132 : 259.0) no description available & (at3g46730 : 204.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46530.1); Has 14658 Blast hits to 14197 proteins in 483 species: Archae - 6; Bacteria - 489; Metazoa - 440; Fungi - 102; Plants - 13534; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative Sw-5, Description = Tomato spotted wilt virus resistance protein, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01466_180275-185432' '(gnl|cdd|39857 : 137.0) no description available & (at3g07040 : 115.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (gnl|cdd|85132 : 115.0) no description available & (reliability: 216.0) & (original description: Putative PGSC0003DMG400006316, Description = Disease resistance protein RPM1, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01495_263733-266274' '(at1g07730 : 232.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT2G28670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66675 : 126.0) no description available & (reliability: 464.0) & (original description: Putative DIR24, Description = Dirigent protein 24, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01739_369649-373755' '(at2g34930 : 332.0) disease resistance family protein / LRR family protein; INVOLVED IN: signal transduction, defense response to fungus, defense response; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 135121 Blast hits to 32840 proteins in 1181 species: Archae - 56; Bacteria - 8201; Metazoa - 34800; Fungi - 1569; Plants - 79859; Viruses - 2; Other Eukaryotes - 10634 (source: NCBI BLink). & (p93194|rpk1_iponi : 216.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 98.5) no description available & (reliability: 664.0) & (original description: Putative PVf1, Description = Receptor-like protein, PFAM = PF00560;PF08263;PF13855;PF13855)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01831_163236-166545' '(q9fsg7|tp1a_maldo : 259.0) Thaumatin-like protein 1a precursor (Allergen Mal d 2) (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|47535 : 241.0) no description available & (at4g38670 : 236.0) Pathogenesis-related thaumatin superfamily protein; INVOLVED IN: response to other organism; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT4G36010.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative TL1, Description = Thaumatin-like protein 1a, PFAM = PF00314)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01917_397611-400630' '(at1g33590 : 132.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction, response to karrikin, defense response; LOCATED IN: cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G33600.1); Has 74647 Blast hits to 28620 proteins in 1034 species: Archae - 16; Bacteria - 6743; Metazoa - 19007; Fungi - 704; Plants - 43140; Viruses - 2; Other Eukaryotes - 5035 (source: NCBI BLink). & (gnl|cdd|35665 : 105.0) no description available & (p93194|rpk1_iponi : 93.6) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 264.0) & (original description: Putative Shy, Description = Leucine rich repeat protein, PFAM = PF13855;PF00560;PF00560;PF00560;PF00560;PF08263)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01934_514657-518146' '(gnl|cdd|66675 : 124.0) no description available & (at1g22900 : 115.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT5G42500.1); Has 955 Blast hits to 954 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 955; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative Ccrd_007776, Description = Plant disease resistance response protein, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01986_36542-41318' '(at2g34930 : 433.0) disease resistance family protein / LRR family protein; INVOLVED IN: signal transduction, defense response to fungus, defense response; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 135121 Blast hits to 32840 proteins in 1181 species: Archae - 56; Bacteria - 8201; Metazoa - 34800; Fungi - 1569; Plants - 79859; Viruses - 2; Other Eukaryotes - 10634 (source: NCBI BLink). & (p93194|rpk1_iponi : 213.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 125.0) no description available & (reliability: 866.0) & (original description: Putative MTR_4g040360, Description = LRR receptor-like kinase family protein, PFAM = PF13855;PF13855;PF13855;PF08263;PF00560;PF00560)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01986_36555-41697' '(at2g34930 : 434.0) disease resistance family protein / LRR family protein; INVOLVED IN: signal transduction, defense response to fungus, defense response; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 135121 Blast hits to 32840 proteins in 1181 species: Archae - 56; Bacteria - 8201; Metazoa - 34800; Fungi - 1569; Plants - 79859; Viruses - 2; Other Eukaryotes - 10634 (source: NCBI BLink). & (p93194|rpk1_iponi : 213.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 125.0) no description available & (reliability: 868.0) & (original description: Putative TCM_025511, Description = Disease resistance family protein / LRR family protein, putative, PFAM = PF13855;PF13855;PF13855;PF08263;PF00560;PF00560)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01990_1359-4990' '(p29060|chia_tobac : 400.0) Acidic endochitinase precursor (EC 3.2.1.14) - Nicotiana tabacum (Common tobacco) & (at5g24090 : 268.0) Chitinase A (class III) expressed exclusively under environmental stress conditions.; chitinase A (CHIA); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to salt stress, response to cold, cellular response to water deprivation, response to wounding, response to light intensity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, chitinase active site (InterPro:IPR001579), Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39899 : 215.0) no description available & (reliability: 536.0) & (original description: Putative achi, Description = Acidic endochitinase, PFAM = PF00704)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf01999_720022-722561' '(p07053|pr1b_tobac : 300.0) Pathogenesis-related protein 1B precursor (PR-1B) - Nicotiana tabacum (Common tobacco) & (at4g33720 : 190.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: basic pathogenesis-related protein 1 (TAIR:AT2G14580.1); Has 3131 Blast hits to 3024 proteins in 381 species: Archae - 0; Bacteria - 70; Metazoa - 1690; Fungi - 339; Plants - 919; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|29108 : 148.0) no description available & (gnl|cdd|38227 : 118.0) no description available & (reliability: 362.0) & (original description: Putative pr1, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02057_248617-261383' '(gnl|cdd|39857 : 296.0) no description available & (gnl|cdd|85132 : 254.0) no description available & (at5g35450 : 232.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 464.0) & (original description: Putative , Description = NBS resistance protein RGA40, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02118_108029-114520' '(at5g66900 : 453.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Powdery mildew resistance protein, RPW8 domain (InterPro:IPR008808), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G66910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39857 : 144.0) no description available & (gnl|cdd|85132 : 119.0) no description available & (reliability: 906.0) & (original description: Putative NRG1, Description = NRG1, PFAM = PF00931;PF05659)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02133_55542-62165' '(gnl|cdd|39857 : 328.0) no description available & (at1g53350 : 259.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|85132 : 232.0) no description available & (reliability: 518.0) & (original description: Putative PGSC0003DMG400007462, Description = NRC2a, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02168_181187-186678' '(gnl|cdd|39857 : 270.0) no description available & (gnl|cdd|85132 : 233.0) no description available & (at1g59780 : 221.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root, flower, synergid; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58400.1); Has 16454 Blast hits to 15209 proteins in 528 species: Archae - 16; Bacteria - 828; Metazoa - 1085; Fungi - 125; Plants - 14178; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF12061;PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02174_15095-17589' '(at4g08850 : 136.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein with leucine-rich repeat domain (TAIR:AT1G35710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 120.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 248.0) & (original description: Putative PGSC0003DMG400004164, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02248_86863-93919' '(gnl|cdd|39857 : 307.0) no description available & (at1g53350 : 267.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|85132 : 222.0) no description available & (reliability: 534.0) & (original description: Putative RGA88, Description = NBS-coding resistance protein, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02272_464002-474251' '(at5g17680 : 355.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 122.0) no description available & (gnl|cdd|39857 : 112.0) no description available & (reliability: 710.0) & (original description: Putative nl27, Description = TMV resistance protein N, PFAM = PF00931;PF01582;PF01582)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02391_18791-22324' '(at1g61105 : 214.0) Toll-Interleukin-Resistance (TIR) domain family protein; FUNCTIONS IN: transmembrane receptor activity; INVOLVED IN: signal transduction, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Toll-Interleukin-Resistance (TIR) domain family protein (TAIR:AT1G52900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative BnaA09g13890D, Description = BnaA09g13890D protein, PFAM = PF13676)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02508_396555-400168' '(at3g24020 : 283.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT4G13580.1); Has 723 Blast hits to 722 proteins in 40 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 719; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 131.0) no description available & (reliability: 566.0) & (original description: Putative Sb01g047330, Description = Putative uncharacterized protein Sb01g047330, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02518_177053-189921' '(gnl|cdd|39857 : 180.0) no description available & (at3g07040 : 137.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (gnl|cdd|85132 : 82.6) no description available & (reliability: 250.0) & (original description: Putative glysoja_000650, Description = NB-ARC domain disease resistance protein, putative, PFAM = PF00931;PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02541_145864-151452' '(at4g04900 : 85.1) encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Most similar to RIC9 and RIC11 (subfamily group I). Gene is expressed predominantly in roots, leaves, and seedlings.; ROP-interactive CRIB motif-containing protein 10 (RIC10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen tube growth; LOCATED IN: cytoplasm; EXPRESSED IN: seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095); BEST Arabidopsis thaliana protein match is: PAK-box/P21-Rho-binding family protein (TAIR:AT4G21745.1); Has 685 Blast hits to 255 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 53; Fungi - 27; Plants - 173; Viruses - 0; Other Eukaryotes - 432 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative EFTS, Description = CRIB domain-containing protein RIC10, PFAM = PF00786)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02553_268025-273368' '(gnl|cdd|39857 : 440.0) no description available & (at3g46530 : 432.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|85132 : 254.0) no description available & (reliability: 834.0) & (original description: Putative RPP13, Description = Disease resistance protein RPP13 variant, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02658_140594-143175' '(at1g65870 : 169.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: cell wall; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G22900.1); Has 912 Blast hits to 910 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 912; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 144.0) no description available & (reliability: 338.0) & (original description: Putative DIR, Description = Dirigent-like protein, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02658_441824-444405' '(at2g21100 : 187.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G65870.1); Has 857 Blast hits to 856 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 152.0) no description available & (reliability: 374.0) & (original description: Putative DIR23, Description = Dirigent protein 23, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02688_107772-112438' '(gnl|cdd|39857 : 338.0) no description available & (at5g35450 : 312.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 221.0) no description available & (reliability: 624.0) & (original description: Putative tm-2, Description = Tm-2 protein, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02826_140821-145766' '(at2g34930 : 339.0) disease resistance family protein / LRR family protein; INVOLVED IN: signal transduction, defense response to fungus, defense response; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 135121 Blast hits to 32840 proteins in 1181 species: Archae - 56; Bacteria - 8201; Metazoa - 34800; Fungi - 1569; Plants - 79859; Viruses - 2; Other Eukaryotes - 10634 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 178.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35838 : 106.0) no description available & (reliability: 678.0) & (original description: Putative PGSC0003DMG400030561, Description = , PFAM = PF08263;PF00560;PF00560;PF00560;PF13855;PF13855)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf02902_95480-101913' '(gnl|cdd|39857 : 283.0) no description available & (gnl|cdd|85132 : 245.0) no description available & (at3g46530 : 244.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 470.0) & (original description: Putative SW5F, Description = NBS resistance protein RGA34, PFAM = PF12061;PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03048_148366-153619' '(gnl|cdd|39857 : 257.0) no description available & (at5g48620 : 229.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 156.0) no description available & (reliability: 458.0) & (original description: Putative , Description = , PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03135_29112-33949' '(gnl|cdd|39857 : 286.0) no description available & (at1g58390 : 268.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, LP.08 eight leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58400.1); Has 14341 Blast hits to 13745 proteins in 491 species: Archae - 4; Bacteria - 531; Metazoa - 280; Fungi - 132; Plants - 13314; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|85132 : 159.0) no description available & (reliability: 536.0) & (original description: Putative PGSC0003DMG400013407, Description = , PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03135_50744-55577' '(gnl|cdd|39857 : 314.0) no description available & (at1g53350 : 258.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|85132 : 238.0) no description available & (reliability: 516.0) & (original description: Putative PGSC0003DMG400007462, Description = NRC2a, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03150_435587-441029' '(gnl|cdd|39857 : 258.0) no description available & (gnl|cdd|85132 : 237.0) no description available & (at1g53350 : 208.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 416.0) & (original description: Putative NBS391R, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03240_79191-83755' '(at2g34930 : 265.0) disease resistance family protein / LRR family protein; INVOLVED IN: signal transduction, defense response to fungus, defense response; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 135121 Blast hits to 32840 proteins in 1181 species: Archae - 56; Bacteria - 8201; Metazoa - 34800; Fungi - 1569; Plants - 79859; Viruses - 2; Other Eukaryotes - 10634 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 179.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35838 : 105.0) no description available & (reliability: 530.0) & (original description: Putative Eix1, Description = Leucine-rich receptor-like kinase family protein, putative, PFAM = PF00560)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03262_60244-64598' '(gnl|cdd|39857 : 283.0) no description available & (gnl|cdd|85132 : 256.0) no description available & (at3g46530 : 219.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 434.0) & (original description: Putative SW5F, Description = Putative ovule protein, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03323_112448-116849' '(at4g04220 : 577.0) receptor like protein 46 (RLP46); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 12 (TAIR:AT1G71400.1); Has 134299 Blast hits to 33174 proteins in 1147 species: Archae - 55; Bacteria - 10381; Metazoa - 36724; Fungi - 1470; Plants - 75311; Viruses - 4; Other Eukaryotes - 10354 (source: NCBI BLink). & (p93194|rpk1_iponi : 257.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 113.0) no description available & (reliability: 1154.0) & (original description: Putative RLP46, Description = Receptor like protein 46, PFAM = PF13855;PF13855;PF13855;PF08263)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03367_197940-200506' '(at1g58170 : 218.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT5G49040.1); Has 838 Blast hits to 837 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 838; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 129.0) no description available & (reliability: 436.0) & (original description: Putative DIR19, Description = Dirigent protein 19, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03461_520893-525067' '(gnl|cdd|39857 : 261.0) no description available & (gnl|cdd|85132 : 254.0) no description available & (at3g46530 : 221.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative R1, Description = R1, PFAM = PF00931;PF12061;PF12061)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03702_445663-456235' '(gnl|cdd|39857 : 312.0) no description available & (at5g35450 : 262.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 231.0) no description available & (reliability: 524.0) & (original description: Putative Prf, Description = PRF, PFAM = PF00931;PF12061)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03820_224534-227484' '(at1g75040 : 273.0) Thaumatin-like protein involved in response to pathogens. mRNA level of the PR-5 gene (At1g75040)is significantly changed after cutting the inflorescence stem indicating the existence of a network of signal transducing pathways as other stress-regulated genes (At5g01410, At3g17800, At1g29930)do not response to the treatment.; pathogenesis-related gene 5 (PR5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: apoplast, cell wall, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75050.1); Has 1613 Blast hits to 1588 proteins in 178 species: Archae - 0; Bacteria - 37; Metazoa - 56; Fungi - 84; Plants - 1422; Viruses - 4; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|47535 : 245.0) no description available & (p83332|tlp1_prupe : 189.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 540.0) & (original description: Putative At1g75040, Description = Pathogenesis-related protein 5, PFAM = PF00314)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03905_164939-167349' '(gnl|cdd|66675 : 99.0) no description available & (at1g22900 : 89.4) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT5G42500.1); Has 955 Blast hits to 954 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 955; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative , Description = Disease resistance-responsive, dirigent domain protein, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03925_116219-121385' '(at2g34930 : 360.0) disease resistance family protein / LRR family protein; INVOLVED IN: signal transduction, defense response to fungus, defense response; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 135121 Blast hits to 32840 proteins in 1181 species: Archae - 56; Bacteria - 8201; Metazoa - 34800; Fungi - 1569; Plants - 79859; Viruses - 2; Other Eukaryotes - 10634 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 216.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35838 : 122.0) no description available & (reliability: 720.0) & (original description: Putative Eix2, Description = EIX receptor 2, PFAM = PF08263;PF13855;PF13855;PF13855;PF13855;PF00560;PF13516;PF13516)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03925_203933-207326' '(at3g05660 : 88.2) receptor like protein 33 (RLP33); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 32 (TAIR:AT3G05650.1); Has 122499 Blast hits to 32804 proteins in 1196 species: Archae - 55; Bacteria - 8957; Metazoa - 28470; Fungi - 1471; Plants - 73451; Viruses - 13; Other Eukaryotes - 10082 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative Eix1, Description = EIX receptor 1, PFAM = PF00560;PF13855;PF08263)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03934_455057-462723' '(gnl|cdd|39857 : 281.0) no description available & (gnl|cdd|85132 : 242.0) no description available & (at1g50180 : 201.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative help3, Description = Hero resistance protein 3 homologue, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03959_64470-69140' '(gnl|cdd|39857 : 264.0) no description available & (gnl|cdd|85132 : 216.0) no description available & (at5g35450 : 204.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative R1, Description = R1, PFAM = PF00931;PF12061)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf03987_333831-340785' '(at5g36930 : 600.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39857 : 168.0) no description available & (gnl|cdd|85132 : 140.0) no description available & (reliability: 1200.0) & (original description: Putative TCM_020221, Description = Disease resistance protein family, putative, PFAM = PF01582;PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf04053_214372-216908' '(p11670|prb1_tobac : 307.0) Basic form of pathogenesis-related protein 1 precursor (PRP 1) - Nicotiana tabacum (Common tobacco) & (at4g33720 : 202.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: basic pathogenesis-related protein 1 (TAIR:AT2G14580.1); Has 3131 Blast hits to 3024 proteins in 381 species: Archae - 0; Bacteria - 70; Metazoa - 1690; Fungi - 339; Plants - 919; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|29108 : 161.0) no description available & (gnl|cdd|38227 : 121.0) no description available & (reliability: 382.0) & (original description: Putative pr1b, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf04053_251966-254283' '(p11670|prb1_tobac : 177.0) Basic form of pathogenesis-related protein 1 precursor (PRP 1) - Nicotiana tabacum (Common tobacco) & (at2g14610 : 169.0) PR1 gene expression is induced in response to a variety of pathogens. It is a useful molecular marker for the SAR response. Though the Genbank record for the cDNA associated to this gene is called 'PR-1-like', the sequence actually corresponds to PR1. Expression of this gene is salicylic-acid responsive.; pathogenesis-related gene 1 (PR1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to vitamin B1, response to jasmonic acid stimulus, systemic acquired resistance, defense response; LOCATED IN: extracellular region, cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: basic pathogenesis-related protein 1 (TAIR:AT2G14580.1); Has 3124 Blast hits to 3017 proteins in 378 species: Archae - 0; Bacteria - 64; Metazoa - 1706; Fungi - 335; Plants - 914; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|29108 : 138.0) no description available & (gnl|cdd|38227 : 118.0) no description available & (reliability: 332.0) & (original description: Putative PR1, Description = Pathogenesis-related protein1, PFAM = PF00188)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf04191_516038-534940' '(at1g27170 : 1033.0) transmembrane receptors;ATP binding; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT1G27180.1); Has 88149 Blast hits to 36022 proteins in 1268 species: Archae - 44; Bacteria - 5525; Metazoa - 17765; Fungi - 1406; Plants - 58458; Viruses - 8; Other Eukaryotes - 4943 (source: NCBI BLink). & (gnl|cdd|39857 : 143.0) no description available & (gnl|cdd|85132 : 135.0) no description available & (reliability: 1914.0) & (original description: Putative NBS162, Description = NBS-coding resistance gene analog, PFAM = PF01582;PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf04223_215227-217790' '(at2g21100 : 140.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G65870.1); Has 857 Blast hits to 856 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 111.0) no description available & (reliability: 280.0) & (original description: Putative DIR, Description = Plant disease resistance response protein, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf04384_57085-64057' '(at4g27430 : 369.0) Positive regulator of light-regulated genes. Novel nuclear protein which requires light for its high level expression.; COP1-interacting protein 7 (CIP7); FUNCTIONS IN: transcription activator activity; INVOLVED IN: chlorophyll biosynthetic process, response to light stimulus, anthocyanin biosynthetic process; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR class), putative (TAIR:AT1G61100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 704.0) & (original description: Putative)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf04403_204534-217531' '(gnl|cdd|85132 : 215.0) no description available & (gnl|cdd|39857 : 207.0) no description available & (at1g50180 : 187.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative RGA86, Description = NBS-coding resistance protein, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf04555_264091-270672' '(at5g24090 : 392.0) Chitinase A (class III) expressed exclusively under environmental stress conditions.; chitinase A (CHIA); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to salt stress, response to cold, cellular response to water deprivation, response to wounding, response to light intensity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, chitinase active site (InterPro:IPR001579), Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p51614|chit3_vitvi : 392.0) Acidic endochitinase precursor (EC 3.2.1.14) - Vitis vinifera (Grape) & (gnl|cdd|39899 : 336.0) no description available & (gnl|cdd|47549 : 173.0) no description available & (reliability: 784.0) & (original description: Putative achi, Description = Serine/threonine-protein kinase, PFAM = PF00704;PF07714)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf04666_25964-28857' '(p29060|chia_tobac : 362.0) Acidic endochitinase precursor (EC 3.2.1.14) - Nicotiana tabacum (Common tobacco) & (at5g24090 : 341.0) Chitinase A (class III) expressed exclusively under environmental stress conditions.; chitinase A (CHIA); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to salt stress, response to cold, cellular response to water deprivation, response to wounding, response to light intensity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, chitinase active site (InterPro:IPR001579), Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39899 : 299.0) no description available & (gnl|cdd|84965 : 106.0) no description available & (reliability: 682.0) & (original description: Putative chi3, Description = Chitinase, PFAM = PF00704)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf04815_243803-250748' '(at5g36930 : 496.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39857 : 152.0) no description available & (gnl|cdd|85132 : 128.0) no description available & (reliability: 992.0) & (original description: Putative HD20, Description = HD domain class transcription factor, PFAM = PF01582;PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf04845_128320-135281' '(gnl|cdd|39857 : 273.0) no description available & (at1g50180 : 238.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|85132 : 230.0) no description available & (reliability: 476.0) & (original description: Putative NBS390, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf04963_408635-415677' '(at5g36930 : 476.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85132 : 152.0) no description available & (gnl|cdd|39857 : 146.0) no description available & (reliability: 952.0) & (original description: Putative HD20, Description = NBS resistance protein RGA31, PFAM = PF01582;PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf04988_227096-232086' '(at4g23440 : 1183.0) Disease resistance protein (TIR-NBS class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, innate immune response; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G56220.1); Has 636 Blast hits to 617 proteins in 139 species: Archae - 3; Bacteria - 309; Metazoa - 6; Fungi - 123; Plants - 176; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 2366.0) & (original description: Putative BnaC01g15000D, Description = BnaC01g15000D protein, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf05019_3639-6754' '(at1g07730 : 219.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT2G28670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66675 : 132.0) no description available & (reliability: 438.0) & (original description: Putative DIR25, Description = Dirigent protein 25, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf05109_284921-329909' '(at5g36930 : 161.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85544 : 128.0) no description available & (reliability: 322.0) & (original description: Putative nl25, Description = TIR-NBS disease resistance-like protein, PFAM = PF01582)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf05109_309497-337088' '(at5g17680 : 569.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 135.0) no description available & (gnl|cdd|39857 : 116.0) no description available & (reliability: 1138.0) & (original description: Putative nl27, Description = TIR-NBS-LRR-TIR type disease resistance protein, PFAM = PF01582;PF01582;PF00931;PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf05109_332833-337013' '(at5g17680 : 422.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 125.0) no description available & (gnl|cdd|39857 : 107.0) no description available & (reliability: 844.0) & (original description: Putative HD8, Description = TIR-NBS-LRR-TIR type disease resistance protein, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf05177_365946-370540' '(at3g46530 : 434.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|39857 : 430.0) no description available & (gnl|cdd|85132 : 255.0) no description available & (reliability: 820.0) & (original description: Putative RPP13, Description = Disease resistance protein RPP13 variant, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf05566_231037-237144' '(gnl|cdd|39857 : 195.0) no description available & (gnl|cdd|85132 : 187.0) no description available & (at3g07040 : 171.0) Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 20241 Blast hits to 16785 proteins in 626 species: Archae - 16; Bacteria - 1308; Metazoa - 4084; Fungi - 259; Plants - 14046; Viruses - 4; Other Eukaryotes - 524 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative PGSC0003DMG400025259, Description = NBS resistance protein RGA49, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf05619_46135-51407' '(at3g14470 : 387.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: protein binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT3G14460.1); Has 25652 Blast hits to 19792 proteins in 681 species: Archae - 38; Bacteria - 1467; Metazoa - 4997; Fungi - 304; Plants - 18213; Viruses - 0; Other Eukaryotes - 633 (source: NCBI BLink). & (gnl|cdd|39857 : 329.0) no description available & (gnl|cdd|85132 : 246.0) no description available & (reliability: 774.0) & (original description: Putative HMA7, Description = Putative uncharacterized protein HMA7, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf05872_227625-230194' '(at1g65870 : 196.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: cell wall; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G22900.1); Has 912 Blast hits to 910 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 912; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 155.0) no description available & (reliability: 392.0) & (original description: Putative DIR21, Description = Dirigent protein 21, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf05982_53690-63333' '(at2g34930 : 253.0) disease resistance family protein / LRR family protein; INVOLVED IN: signal transduction, defense response to fungus, defense response; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 135121 Blast hits to 32840 proteins in 1181 species: Archae - 56; Bacteria - 8201; Metazoa - 34800; Fungi - 1569; Plants - 79859; Viruses - 2; Other Eukaryotes - 10634 (source: NCBI BLink). & (p93194|rpk1_iponi : 150.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35693 : 107.0) no description available & (reliability: 506.0) & (original description: Putative PGSC0003DMG400030561, Description = , PFAM = PF13855;PF13855;PF13855;PF00560;PF00560;PF08263)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf06059_165561-169252' '(gnl|cdd|39857 : 274.0) no description available & (at1g50180 : 247.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G48620.1); Has 13478 Blast hits to 13006 proteins in 446 species: Archae - 8; Bacteria - 393; Metazoa - 272; Fungi - 117; Plants - 12628; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|85132 : 247.0) no description available & (reliability: 494.0) & (original description: Putative NBS390, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf06305_412973-415545' '(p13240|dr206_pea : 230.0) Disease resistance response protein 206 - Pisum sativum (Garden pea) & (gnl|cdd|66675 : 195.0) no description available & (at4g23690 : 190.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G64160.1); Has 772 Blast hits to 771 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 772; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 380.0) & (original description: Putative PI206, Description = Disease resistance response protein 206, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf06305_438181-440738' '(p13240|dr206_pea : 221.0) Disease resistance response protein 206 - Pisum sativum (Garden pea) & (gnl|cdd|66675 : 204.0) no description available & (at4g23690 : 178.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G64160.1); Has 772 Blast hits to 771 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 772; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative PI206, Description = Disease resistance response protein 206, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf06347_190640-195390' '(gnl|cdd|39857 : 292.0) no description available & (gnl|cdd|85132 : 239.0) no description available & (at1g53350 : 205.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 410.0) & (original description: Putative rx, Description = Rx protein, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf06347_192215-195405' '(gnl|cdd|85132 : 193.0) no description available & (gnl|cdd|39857 : 178.0) no description available & (at3g46530 : 124.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative RGA90, Description = NBS-coding resistance protein, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf06473_18941-39970' '(gnl|cdd|39857 : 314.0) no description available & (at3g46730 : 250.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46530.1); Has 14658 Blast hits to 14197 proteins in 483 species: Archae - 6; Bacteria - 489; Metazoa - 440; Fungi - 102; Plants - 13534; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|85132 : 249.0) no description available & (reliability: 500.0) & (original description: Putative GPA2, Description = Disease resistance protein RGH5, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf06553_12240-56028' '(gnl|cdd|39857 : 301.0) no description available & (gnl|cdd|85132 : 235.0) no description available & (at3g46530 : 199.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 380.0) & (original description: Putative NBS209, Description = NBS-coding resistance gene analog, PFAM = PF01419;PF01419;PF01419;PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf06684_312766-315650' '(at5g24090 : 417.0) Chitinase A (class III) expressed exclusively under environmental stress conditions.; chitinase A (CHIA); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to salt stress, response to cold, cellular response to water deprivation, response to wounding, response to light intensity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, chitinase active site (InterPro:IPR001579), Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p23472|chly_hevbr : 414.0) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14); Lysozyme (EC 3.2.1.17)] - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|39899 : 331.0) no description available & (gnl|cdd|84965 : 111.0) no description available & (reliability: 834.0) & (original description: Putative CHIB1, Description = Acidic endochitinase, PFAM = PF00704)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf06709_481120-486712' '(gnl|cdd|39857 : 293.0) no description available & (at4g27220 : 214.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT4G27190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 147.0) no description available & (reliability: 428.0) & (original description: Putative PGSC0003DMG400027325, Description = Nbs-lrr resistance protein, PFAM = PF13855;PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf06736_822224-833950' '(at4g12010 : 301.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT4G19510.1); Has 31049 Blast hits to 21052 proteins in 960 species: Archae - 20; Bacteria - 2553; Metazoa - 5096; Fungi - 331; Plants - 21936; Viruses - 4; Other Eukaryotes - 1109 (source: NCBI BLink). & (gnl|cdd|85544 : 130.0) no description available & (gnl|cdd|39857 : 100.0) no description available & (reliability: 602.0) & (original description: Putative PGSC0003DMG400010527, Description = Putative ovule protein, PFAM = PF01582)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf06848_415059-431537' '(at5g17680 : 544.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39857 : 166.0) no description available & (gnl|cdd|85132 : 166.0) no description available & (reliability: 1088.0) & (original description: Putative nl27, Description = NL27, PFAM = PF00931;PF01582)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf06848_670783-673860' '(at1g72840 : 144.0) Disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: ovule, embryo, sperm cell, root, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G48770.1). & (gnl|cdd|85544 : 108.0) no description available & (reliability: 272.0) & (original description: Putative nl25, Description = TIR-NBS disease resistance-like protein, PFAM = PF01582)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf06848_752059-755105' '(at5g17680 : 115.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85544 : 90.4) no description available & (reliability: 230.0) & (original description: Putative CN, Description = N-like protein, PFAM = PF01582)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf07123ctg010_2215-5124' '(at1g35710 : 457.0) Protein kinase family protein with leucine-rich repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT4G08850.1); Has 304074 Blast hits to 147448 proteins in 4766 species: Archae - 178; Bacteria - 29187; Metazoa - 106993; Fungi - 12531; Plants - 120860; Viruses - 430; Other Eukaryotes - 33895 (source: NCBI BLink). & (p93194|rpk1_iponi : 326.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35693 : 157.0) no description available & (reliability: 842.0) & (original description: Putative EILP, Description = Elicitor-inducible LRR receptor-like protein EILP, PFAM = PF08263;PF13855;PF13855)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf07223_342573-345043' '(at3g58090 : 107.0) Disease resistance-responsive (dirigent-like protein) family protein; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G65870.1); Has 879 Blast hits to 874 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 871; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative DIR17, Description = AtDIR17, PFAM = )' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf07298_9470-11026' '(gnl|cdd|85132 : 154.0) no description available & (gnl|cdd|39857 : 138.0) no description available & (at3g46530 : 110.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 199.6) & (original description: Putative hero, Description = Putative ovule protein, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf07355_114380-117798' '(at1g33590 : 505.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction, response to karrikin, defense response; LOCATED IN: cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G33600.1); Has 74647 Blast hits to 28620 proteins in 1034 species: Archae - 16; Bacteria - 6743; Metazoa - 19007; Fungi - 704; Plants - 43140; Viruses - 2; Other Eukaryotes - 5035 (source: NCBI BLink). & (p93194|rpk1_iponi : 129.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 98.6) no description available & (reliability: 1010.0) & (original description: Putative At1g33590, Description = Leucine-rich repeat (LRR) family protein, PFAM = PF08263;PF13855;PF13855)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf07488_11575-17792' '(gnl|cdd|39857 : 395.0) no description available & (at4g26090 : 296.0) Encodes a plasma membrane protein with leucine-rich repeat, leucine zipper, and P loop domains that confers resistance to Pseudomonas syringae infection by interacting with the avirulence gene avrRpt2. RPS2 protein interacts directly with plasma membrane associated protein RIN4 and this interaction is disrupted by avrRpt2.; RESISTANT TO P. SYRINGAE 2 (RPS2); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: RPS5-like 1 (TAIR:AT1G12210.1); Has 21906 Blast hits to 18242 proteins in 683 species: Archae - 18; Bacteria - 1169; Metazoa - 4701; Fungi - 258; Plants - 15223; Viruses - 0; Other Eukaryotes - 537 (source: NCBI BLink). & (gnl|cdd|85132 : 208.0) no description available & (reliability: 548.0) & (original description: Putative PGSC0003DMG400013736, Description = , PFAM = PF13855;PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf08006_139457-145297' '(gnl|cdd|39857 : 271.0) no description available & (gnl|cdd|85132 : 242.0) no description available & (at5g48620 : 232.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 464.0) & (original description: Putative R1A, Description = Late blight resistance protein R1-A, PFAM = PF12061;PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf08390_91961-98276' '(at5g36930 : 506.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85132 : 139.0) no description available & (gnl|cdd|39857 : 130.0) no description available & (reliability: 1012.0) & (original description: Putative HD20, Description = TMV resistance protein N, putative, PFAM = PF01582;PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf08597_247316-252105' '(gnl|cdd|39857 : 334.0) no description available & (at3g46530 : 268.0) Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.; RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|85132 : 252.0) no description available & (reliability: 508.0) & (original description: Putative PGSC0003DMG400013891, Description = Putative ovule protein, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf08698_190710-194352' '(gnl|cdd|39857 : 288.0) no description available & (gnl|cdd|85132 : 228.0) no description available & (at1g59780 : 219.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root, flower, synergid; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58400.1); Has 16454 Blast hits to 15209 proteins in 528 species: Archae - 16; Bacteria - 828; Metazoa - 1085; Fungi - 125; Plants - 14178; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative PGSC0003DMG400021169, Description = , PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf08819_227098-229670' '(p13240|dr206_pea : 226.0) Disease resistance response protein 206 - Pisum sativum (Garden pea) & (at4g23690 : 195.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G64160.1); Has 772 Blast hits to 771 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 772; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 194.0) no description available & (reliability: 390.0) & (original description: Putative DIR6, Description = Dirigent protein 6, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf08975_343656-350087' '(at3g14470 : 421.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: protein binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT3G14460.1); Has 25652 Blast hits to 19792 proteins in 681 species: Archae - 38; Bacteria - 1467; Metazoa - 4997; Fungi - 304; Plants - 18213; Viruses - 0; Other Eukaryotes - 633 (source: NCBI BLink). & (gnl|cdd|39857 : 378.0) no description available & (gnl|cdd|85132 : 250.0) no description available & (reliability: 842.0) & (original description: Putative PGSC0003DMG400033651, Description = Putative disease resistance gene NBS-LRR family protein, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf09716_255000-267644' '(gnl|cdd|39857 : 368.0) no description available & (at5g35450 : 259.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 247.0) no description available & (reliability: 518.0) & (original description: Putative PGSC0003DMG400007462, Description = NRC2a, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf10015_911723-914593' '(at2g39430 : 217.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, hypocotyl, root, petiole, leaf; EXPRESSED DURING: LP.04 four leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT3G55230.1); Has 728 Blast hits to 728 proteins in 43 species: Archae - 2; Bacteria - 4; Metazoa - 2; Fungi - 4; Plants - 715; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66675 : 129.0) no description available & (reliability: 434.0) & (original description: Putative DIR9, Description = Disease resistance-responsive family protein, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf10015_914594-936166' '(at4g13580 : 107.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT3G24020.1); Has 723 Blast hits to 722 proteins in 40 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 719; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 82.6) no description available & (reliability: 214.0) & (original description: Putative PGSC0003DMG400023414, Description = Disease resistance-responsive family protein, putative, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf10228_219623-222093' '(at3g58090 : 110.0) Disease resistance-responsive (dirigent-like protein) family protein; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G65870.1); Has 879 Blast hits to 874 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 871; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative LOC100856949, Description = Os01g0835600 protein, PFAM = )' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf10767_459096-486067' '(gnl|cdd|39857 : 309.0) no description available & (at1g53350 : 272.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|85132 : 222.0) no description available & (reliability: 544.0) & (original description: Putative RGA88, Description = NBS-coding resistance protein, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf11154_70090-82396' '(at5g17680 : 508.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 155.0) no description available & (gnl|cdd|39857 : 149.0) no description available & (reliability: 1016.0) & (original description: Putative nl27, Description = NL27, PFAM = PF00931;PF01582)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf12102_300511-303077' '(at2g21100 : 158.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G65870.1); Has 857 Blast hits to 856 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 131.0) no description available & (reliability: 316.0) & (original description: Putative DIR1, Description = Dirigent protein 1, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf12305_13030-18279' '(gnl|cdd|39857 : 296.0) no description available & (at5g48620 : 231.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 227.0) no description available & (reliability: 462.0) & (original description: Putative NBS173-3, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf12364_28663-31211' '(at2g21100 : 199.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G65870.1); Has 857 Blast hits to 856 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 134.0) no description available & (reliability: 398.0) & (original description: Putative DIR23, Description = Dirigent protein 23, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf12866_59404-62225' '(at2g25790 : 131.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT4G28650.1); Has 153683 Blast hits to 57628 proteins in 1967 species: Archae - 59; Bacteria - 14832; Metazoa - 38909; Fungi - 1966; Plants - 84929; Viruses - 21; Other Eukaryotes - 12967 (source: NCBI BLink). & (p93194|rpk1_iponi : 108.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 92.4) no description available & (reliability: 238.0) & (original description: Putative BnaCnng18680D, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF13855)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf13231_178055-183850' '(gnl|cdd|39857 : 256.0) no description available & (at5g35450 : 185.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85132 : 180.0) no description available & (reliability: 370.0) & (original description: Putative PGSC0003DMG400004873, Description = Putative ovule protein, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf13394_145215-147772' '(p13240|dr206_pea : 214.0) Disease resistance response protein 206 - Pisum sativum (Garden pea) & (gnl|cdd|66675 : 206.0) no description available & (at4g23690 : 179.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G64160.1); Has 772 Blast hits to 771 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 772; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative PI206, Description = Disease resistance response protein 206, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf13842_126015-142638' '(at1g47890 : 403.0) receptor like protein 7 (RLP7); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 6 (TAIR:AT1G45616.1); Has 144165 Blast hits to 35486 proteins in 1317 species: Archae - 51; Bacteria - 13451; Metazoa - 35189; Fungi - 1938; Plants - 82186; Viruses - 41; Other Eukaryotes - 11309 (source: NCBI BLink). & (p93194|rpk1_iponi : 184.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 126.0) no description available & (reliability: 806.0) & (original description: Putative vdr3, Description = Leucine-rich-repeat receptor-like protein, PFAM = PF08263;PF00560;PF13855)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf13926_197831-205737' '(p07053|pr1b_tobac : 289.0) Pathogenesis-related protein 1B precursor (PR-1B) - Nicotiana tabacum (Common tobacco) & (at2g14580 : 186.0) pathogenesis related protein, encodes a basic PR1-like protein. Expresses in flowers, roots, and not in leaves and responses to ethylene and methyl jasmonate. Salicylic acid represses gene expression.; basic pathogenesis-related protein 1 (PRB1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to ethylene stimulus, response to jasmonic acid stimulus, response to salicylic acid stimulus; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: shoot, shoot apex, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: pathogenesis-related gene 1 (TAIR:AT2G14610.1); Has 3181 Blast hits to 3075 proteins in 384 species: Archae - 0; Bacteria - 66; Metazoa - 1736; Fungi - 341; Plants - 911; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|29108 : 162.0) no description available & (gnl|cdd|38227 : 130.0) no description available & (reliability: 372.0) & (original description: Putative pr1, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf17398_4515-9049' '(at3g50950 : 983.0) HOPZ-ACTIVATED RESISTANCE 1 (ZAR1); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 15477 Blast hits to 13963 proteins in 472 species: Archae - 2; Bacteria - 362; Metazoa - 212; Fungi - 129; Plants - 14652; Viruses - 8; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|39857 : 403.0) no description available & (gnl|cdd|85132 : 291.0) no description available & (reliability: 1966.0) & (original description: Putative RPP13L4, Description = Disease resistance RPP13-like protein 4, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf17839_525462-529811' '(gnl|cdd|39857 : 313.0) no description available & (gnl|cdd|85132 : 262.0) no description available & (at5g35450 : 235.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 470.0) & (original description: Putative , Description = NBS resistance protein RGA41, PFAM = PF00931)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf20629_10351-16616' '(at5g36930 : 514.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85132 : 137.0) no description available & (gnl|cdd|39857 : 134.0) no description available & (reliability: 1028.0) & (original description: Putative HD20, Description = TIR-NBS type disease resistance protein, PFAM = PF00931;PF01582)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf23557_70722-73766' '(at5g23400 : 566.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction, defense response; LOCATED IN: cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT2G26380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 171.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 132.0) no description available & (reliability: 1132.0) & (original description: Putative At5g23400, Description = Disease resistance protein-like, PFAM = PF13855;PF13855;PF13855;PF08263;PF00560)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf30418_23754-26761' '(at2g39430 : 216.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, hypocotyl, root, petiole, leaf; EXPRESSED DURING: LP.04 four leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT3G55230.1); Has 728 Blast hits to 728 proteins in 43 species: Archae - 2; Bacteria - 4; Metazoa - 2; Fungi - 4; Plants - 715; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66675 : 126.0) no description available & (reliability: 432.0) & (original description: Putative BnaC04g46330D, Description = BnaC04g46330D protein, PFAM = PF03018)' T '20.1.7' 'stress.biotic.PR-proteins' 'niben101scf34945_122981-125995' '(at1g61105 : 213.0) Toll-Interleukin-Resistance (TIR) domain family protein; FUNCTIONS IN: transmembrane receptor activity; INVOLVED IN: signal transduction, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Toll-Interleukin-Resistance (TIR) domain family protein (TAIR:AT1G52900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative BnaA09g13890D, Description = BnaA09g13890D protein, PFAM = PF01582)' T '20.1.7.6' 'stress.biotic.PR-proteins.proteinase inhibitors' 'niben101scf05363_427254-430362' '(gnl|cdd|29118 : 140.0) no description available & (gnl|cdd|37603 : 117.0) no description available & (at1g47710 : 115.0) Serine protease inhibitor (SERPIN) family protein; FUNCTIONS IN: serine-type endopeptidase inhibitor activity, cysteine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease inhibitor I4, serpin, plant (InterPro:IPR015554), Protease inhibitor I4, serpin (InterPro:IPR000215); BEST Arabidopsis thaliana protein match is: Serine protease inhibitor (SERPIN) family protein (TAIR:AT3G45220.1); Has 6643 Blast hits to 6565 proteins in 500 species: Archae - 66; Bacteria - 387; Metazoa - 5142; Fungi - 12; Plants - 353; Viruses - 463; Other Eukaryotes - 220 (source: NCBI BLink). & (p06293|prtz_horvu : 92.0) Protein Z (Z4) (Major endosperm albumin) - Hordeum vulgare (Barley) & (reliability: 210.0) & (original description: Putative ps-1, Description = Serpin-like protein, PFAM = PF00079)' T '20.1.7.6.1' 'stress.biotic.PR-proteins.proteinase inhibitors.trypsin inhibitor' 'nbv0.3scaffold13077_21562-24164' '(gnl|cdd|29140 : 147.0) no description available & (at1g17860 : 97.8) Kunitz family trypsin and protease inhibitor protein; FUNCTIONS IN: endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I3, Kunitz legume (InterPro:IPR002160), Kunitz inhibitor ST1-like (InterPro:IPR011065); BEST Arabidopsis thaliana protein match is: kunitz trypsin inhibitor 1 (TAIR:AT1G73260.1); Has 1019 Blast hits to 1019 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1018; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p16347|iaas_wheat : 81.3) Endogenous alpha-amylase/subtilisin inhibitor (WASI) - Triticum aestivum (Wheat) & (reliability: 195.6) & (original description: Putative PI, Description = Kunitz-like protease inhibitor, PFAM = PF00197)' T '20.1.7.6.1' 'stress.biotic.PR-proteins.proteinase inhibitors.trypsin inhibitor' 'niben101scf00298_324627-337044' '(at1g19110 : 777.0) inter-alpha-trypsin inhibitor heavy chain-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72500.1); Has 1620 Blast hits to 1609 proteins in 312 species: Archae - 28; Bacteria - 510; Metazoa - 544; Fungi - 65; Plants - 218; Viruses - 0; Other Eukaryotes - 255 (source: NCBI BLink). & (gnl|cdd|29234 : 180.0) no description available & (reliability: 1554.0) & (original description: Putative At1g19110, Description = Inter-alpha-trypsin inhibitor heavy chain-like protein, PFAM = PF13768)' T '20.1.7.6.1' 'stress.biotic.PR-proteins.proteinase inhibitors.trypsin inhibitor' 'niben101scf02353_636846-639472' '(at1g17860 : 199.0) Kunitz family trypsin and protease inhibitor protein; FUNCTIONS IN: endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I3, Kunitz legume (InterPro:IPR002160), Kunitz inhibitor ST1-like (InterPro:IPR011065); BEST Arabidopsis thaliana protein match is: kunitz trypsin inhibitor 1 (TAIR:AT1G73260.1); Has 1019 Blast hits to 1019 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1018; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|29140 : 170.0) no description available & (p29421|iaas_orysa : 99.4) Alpha-amylase/subtilisin inhibitor precursor (RASI) - Oryza sativa (Rice) & (reliability: 398.0) & (original description: Putative KTI1, Description = Miraculin, PFAM = PF00197)' T '20.1.7.6.1' 'stress.biotic.PR-proteins.proteinase inhibitors.trypsin inhibitor' 'niben101scf02353_757573-760199' '(at1g17860 : 199.0) Kunitz family trypsin and protease inhibitor protein; FUNCTIONS IN: endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I3, Kunitz legume (InterPro:IPR002160), Kunitz inhibitor ST1-like (InterPro:IPR011065); BEST Arabidopsis thaliana protein match is: kunitz trypsin inhibitor 1 (TAIR:AT1G73260.1); Has 1019 Blast hits to 1019 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1018; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|29140 : 167.0) no description available & (p29421|iaas_orysa : 97.4) Alpha-amylase/subtilisin inhibitor precursor (RASI) - Oryza sativa (Rice) & (reliability: 398.0) & (original description: Putative KTI1, Description = Kunitz trypsin inhibitor 1, PFAM = PF00197)' T '20.1.7.6.1' 'stress.biotic.PR-proteins.proteinase inhibitors.trypsin inhibitor' 'niben101scf04078_2-2631' '(at1g17860 : 196.0) Kunitz family trypsin and protease inhibitor protein; FUNCTIONS IN: endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I3, Kunitz legume (InterPro:IPR002160), Kunitz inhibitor ST1-like (InterPro:IPR011065); BEST Arabidopsis thaliana protein match is: kunitz trypsin inhibitor 1 (TAIR:AT1G73260.1); Has 1019 Blast hits to 1019 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1018; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|29140 : 169.0) no description available & (p29421|iaas_orysa : 92.8) Alpha-amylase/subtilisin inhibitor precursor (RASI) - Oryza sativa (Rice) & (reliability: 392.0) & (original description: Putative ASP, Description = 21 kDa seed protein, PFAM = PF00197)' T '20.1.7.6.1' 'stress.biotic.PR-proteins.proteinase inhibitors.trypsin inhibitor' 'niben101scf05063_409613-419918' '(at1g19110 : 786.0) inter-alpha-trypsin inhibitor heavy chain-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72500.1); Has 1620 Blast hits to 1609 proteins in 312 species: Archae - 28; Bacteria - 510; Metazoa - 544; Fungi - 65; Plants - 218; Viruses - 0; Other Eukaryotes - 255 (source: NCBI BLink). & (gnl|cdd|29234 : 190.0) no description available & (reliability: 1572.0) & (original description: Putative At1g19110, Description = Inter-alpha-trypsin inhibitor heavy chain-like protein, PFAM = PF13768)' T '20.1.7.6.1' 'stress.biotic.PR-proteins.proteinase inhibitors.trypsin inhibitor' 'niben101scf06424_57413-60036' '(gnl|cdd|29140 : 149.0) no description available & (at1g17860 : 147.0) Kunitz family trypsin and protease inhibitor protein; FUNCTIONS IN: endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I3, Kunitz legume (InterPro:IPR002160), Kunitz inhibitor ST1-like (InterPro:IPR011065); BEST Arabidopsis thaliana protein match is: kunitz trypsin inhibitor 1 (TAIR:AT1G73260.1); Has 1019 Blast hits to 1019 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1018; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p16347|iaas_wheat : 100.0) Endogenous alpha-amylase/subtilisin inhibitor (WASI) - Triticum aestivum (Wheat) & (reliability: 294.0) & (original description: Putative KTPI, Description = Kunitz-type protease inhibitor, PFAM = PF00197)' T '20.1.7.6.1' 'stress.biotic.PR-proteins.proteinase inhibitors.trypsin inhibitor' 'niben101scf06424_232243-234504' '(at1g17860 : 226.0) Kunitz family trypsin and protease inhibitor protein; FUNCTIONS IN: endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I3, Kunitz legume (InterPro:IPR002160), Kunitz inhibitor ST1-like (InterPro:IPR011065); BEST Arabidopsis thaliana protein match is: kunitz trypsin inhibitor 1 (TAIR:AT1G73260.1); Has 1019 Blast hits to 1019 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1018; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|29140 : 185.0) no description available & (p29421|iaas_orysa : 111.0) Alpha-amylase/subtilisin inhibitor precursor (RASI) - Oryza sativa (Rice) & (reliability: 452.0) & (original description: Putative KTI1, Description = Kunitz type trypsin inhibitor / miraculin, PFAM = PF00197)' T '20.1.7.6.1' 'stress.biotic.PR-proteins.proteinase inhibitors.trypsin inhibitor' 'niben101scf06825_14209-16823' '(at1g17860 : 222.0) Kunitz family trypsin and protease inhibitor protein; FUNCTIONS IN: endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I3, Kunitz legume (InterPro:IPR002160), Kunitz inhibitor ST1-like (InterPro:IPR011065); BEST Arabidopsis thaliana protein match is: kunitz trypsin inhibitor 1 (TAIR:AT1G73260.1); Has 1019 Blast hits to 1019 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1018; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|29140 : 183.0) no description available & (p29421|iaas_orysa : 107.0) Alpha-amylase/subtilisin inhibitor precursor (RASI) - Oryza sativa (Rice) & (reliability: 444.0) & (original description: Putative KTI1, Description = Kunitz type trypsin inhibitor / miraculin, PFAM = PF00197)' T '20.1.7.6.1' 'stress.biotic.PR-proteins.proteinase inhibitors.trypsin inhibitor' 'niben101scf07932_12429-22856' '(at1g19110 : 810.0) inter-alpha-trypsin inhibitor heavy chain-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72500.1); Has 1620 Blast hits to 1609 proteins in 312 species: Archae - 28; Bacteria - 510; Metazoa - 544; Fungi - 65; Plants - 218; Viruses - 0; Other Eukaryotes - 255 (source: NCBI BLink). & (gnl|cdd|29234 : 188.0) no description available & (reliability: 1620.0) & (original description: Putative At1g19110, Description = Inter-alpha-trypsin inhibitor heavy chain-like protein, PFAM = PF13768)' T '20.1.7.6.1' 'stress.biotic.PR-proteins.proteinase inhibitors.trypsin inhibitor' 'niben101scf08855_8312-10982' '(gnl|cdd|29140 : 152.0) no description available & (at1g17860 : 133.0) Kunitz family trypsin and protease inhibitor protein; FUNCTIONS IN: endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I3, Kunitz legume (InterPro:IPR002160), Kunitz inhibitor ST1-like (InterPro:IPR011065); BEST Arabidopsis thaliana protein match is: kunitz trypsin inhibitor 1 (TAIR:AT1G73260.1); Has 1019 Blast hits to 1019 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1018; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p29421|iaas_orysa : 100.0) Alpha-amylase/subtilisin inhibitor precursor (RASI) - Oryza sativa (Rice) & (reliability: 266.0) & (original description: Putative Kti, Description = Kunitz inhibitor ST1-like protein, PFAM = PF00197)' T '20.1.7.6.1' 'stress.biotic.PR-proteins.proteinase inhibitors.trypsin inhibitor' 'niben101scf11312_76855-90785' '(at1g19110 : 710.0) inter-alpha-trypsin inhibitor heavy chain-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72500.1); Has 1620 Blast hits to 1609 proteins in 312 species: Archae - 28; Bacteria - 510; Metazoa - 544; Fungi - 65; Plants - 218; Viruses - 0; Other Eukaryotes - 255 (source: NCBI BLink). & (gnl|cdd|29234 : 191.0) no description available & (reliability: 1420.0) & (original description: Putative At1g19110, Description = Inter-alpha-trypsin inhibitor heavy chain-like protein, PFAM = PF13768)' T '20.1.7.10' 'stress.biotic.PR-proteins.NPR' 'nbv0.3scaffold26677_16954-22782' '(at5g45110 : 554.0) Encodes a paralog of NPR1. Involved in negative regulation of defense responses against bacterial and oomycete pathogens. npr3 mutants has elevated level of PR1 expression. Interacts with TGA2, TGA3, TGA5 and TGA6 in yeast two hybrid assays.; NPR1-like protein 3 (NPR3); INVOLVED IN: defense response to fungus, incompatible interaction, defense response to bacterium, incompatible interaction; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), NPR1/NIM1 like, C-terminal (InterPro:IPR021094), BTB/POZ fold (InterPro:IPR011333), Ankyrin repeat-containing domain (InterPro:IPR020683), BTB/POZ-like (InterPro:IPR000210), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: NPR1-like protein 4 (TAIR:AT4G19660.1); Has 2270 Blast hits to 1933 proteins in 191 species: Archae - 0; Bacteria - 121; Metazoa - 545; Fungi - 58; Plants - 638; Viruses - 9; Other Eukaryotes - 899 (source: NCBI BLink). & (reliability: 1108.0) & (original description: Putative NPR3, Description = Regulatory protein NPR3, PFAM = PF00651;PF12313;PF11900)' T '20.1.7.10' 'stress.biotic.PR-proteins.NPR' 'niben044scf00024156ctg002_763-6005' '(at5g45110 : 522.0) Encodes a paralog of NPR1. Involved in negative regulation of defense responses against bacterial and oomycete pathogens. npr3 mutants has elevated level of PR1 expression. Interacts with TGA2, TGA3, TGA5 and TGA6 in yeast two hybrid assays.; NPR1-like protein 3 (NPR3); INVOLVED IN: defense response to fungus, incompatible interaction, defense response to bacterium, incompatible interaction; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), NPR1/NIM1 like, C-terminal (InterPro:IPR021094), BTB/POZ fold (InterPro:IPR011333), Ankyrin repeat-containing domain (InterPro:IPR020683), BTB/POZ-like (InterPro:IPR000210), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: NPR1-like protein 4 (TAIR:AT4G19660.1); Has 2270 Blast hits to 1933 proteins in 191 species: Archae - 0; Bacteria - 121; Metazoa - 545; Fungi - 58; Plants - 638; Viruses - 9; Other Eukaryotes - 899 (source: NCBI BLink). & (reliability: 1044.0) & (original description: Putative NPR3, Description = Regulatory protein NPR3, PFAM = PF12796;PF12313;PF00651;PF11900)' T '20.1.7.10' 'stress.biotic.PR-proteins.NPR' 'niben101scf03101_255370-261809' '(at5g45110 : 503.0) Encodes a paralog of NPR1. Involved in negative regulation of defense responses against bacterial and oomycete pathogens. npr3 mutants has elevated level of PR1 expression. Interacts with TGA2, TGA3, TGA5 and TGA6 in yeast two hybrid assays.; NPR1-like protein 3 (NPR3); INVOLVED IN: defense response to fungus, incompatible interaction, defense response to bacterium, incompatible interaction; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), NPR1/NIM1 like, C-terminal (InterPro:IPR021094), BTB/POZ fold (InterPro:IPR011333), Ankyrin repeat-containing domain (InterPro:IPR020683), BTB/POZ-like (InterPro:IPR000210), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: NPR1-like protein 4 (TAIR:AT4G19660.1); Has 2270 Blast hits to 1933 proteins in 191 species: Archae - 0; Bacteria - 121; Metazoa - 545; Fungi - 58; Plants - 638; Viruses - 9; Other Eukaryotes - 899 (source: NCBI BLink). & (reliability: 1006.0) & (original description: Putative NML2, Description = NIM1-like protein 2, PFAM = PF12313;PF11900;PF00651)' T '20.1.7.10' 'stress.biotic.PR-proteins.NPR' 'niben101scf05245_21444-27272' '(at5g45110 : 603.0) Encodes a paralog of NPR1. Involved in negative regulation of defense responses against bacterial and oomycete pathogens. npr3 mutants has elevated level of PR1 expression. Interacts with TGA2, TGA3, TGA5 and TGA6 in yeast two hybrid assays.; NPR1-like protein 3 (NPR3); INVOLVED IN: defense response to fungus, incompatible interaction, defense response to bacterium, incompatible interaction; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), NPR1/NIM1 like, C-terminal (InterPro:IPR021094), BTB/POZ fold (InterPro:IPR011333), Ankyrin repeat-containing domain (InterPro:IPR020683), BTB/POZ-like (InterPro:IPR000210), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: NPR1-like protein 4 (TAIR:AT4G19660.1); Has 2270 Blast hits to 1933 proteins in 191 species: Archae - 0; Bacteria - 121; Metazoa - 545; Fungi - 58; Plants - 638; Viruses - 9; Other Eukaryotes - 899 (source: NCBI BLink). & (reliability: 1206.0) & (original description: Putative NPR3, Description = Regulatory protein NPR3, PFAM = PF12313;PF11900;PF00651)' T '20.1.7.10' 'stress.biotic.PR-proteins.NPR' 'niben101scf14780_105875-112100' '(at1g64280 : 522.0) This gene is a key regulator of the salicylic acid (SA)-mediated systemic acquired resistance (SAR) pathway. It is similar to the transcription factor inhibitor I kappa B, and contains ankyrin repeats. It confers resistance to the pathogens Pseudomonas syringae and Peronospora parasitica in a dosage-dependent fashion. Although transgenic Arabidopsis plants overexpressing NPR1 acquire enhanced sensitivity to SA and (benzothiadiazole) BTH, they display no obvious detrimental morphological changes and do not have elevated pathogenesis-related gene expression until activated by inducers or pathogens.; NONEXPRESSER OF PR GENES 1 (NPR1); CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), NPR1/NIM1 like, C-terminal (InterPro:IPR021094), BTB/POZ fold (InterPro:IPR011333), Ankyrin repeat-containing domain (InterPro:IPR020683), BTB/POZ-like (InterPro:IPR000210), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein / BTB/POZ domain-containing protein (TAIR:AT4G26120.1); Has 5193 Blast hits to 3365 proteins in 257 species: Archae - 2; Bacteria - 309; Metazoa - 2278; Fungi - 110; Plants - 802; Viruses - 16; Other Eukaryotes - 1676 (source: NCBI BLink). & (reliability: 986.0) & (original description: Putative NPR1, Description = Regulatory protein NPR1, PFAM = PF00651;PF12313;PF11900;PF13637)' T '20.1.7.10' 'stress.biotic.PR-proteins.NPR' 'niben101scf19043_30851-35616' '(at5g45110 : 479.0) Encodes a paralog of NPR1. Involved in negative regulation of defense responses against bacterial and oomycete pathogens. npr3 mutants has elevated level of PR1 expression. Interacts with TGA2, TGA3, TGA5 and TGA6 in yeast two hybrid assays.; NPR1-like protein 3 (NPR3); INVOLVED IN: defense response to fungus, incompatible interaction, defense response to bacterium, incompatible interaction; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), NPR1/NIM1 like, C-terminal (InterPro:IPR021094), BTB/POZ fold (InterPro:IPR011333), Ankyrin repeat-containing domain (InterPro:IPR020683), BTB/POZ-like (InterPro:IPR000210), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: NPR1-like protein 4 (TAIR:AT4G19660.1); Has 2270 Blast hits to 1933 proteins in 191 species: Archae - 0; Bacteria - 121; Metazoa - 545; Fungi - 58; Plants - 638; Viruses - 9; Other Eukaryotes - 899 (source: NCBI BLink). & (reliability: 958.0) & (original description: Putative NPR3, Description = Regulatory protein NPR3, PFAM = PF00651;PF11900;PF12313)' T '20.1.7.10.1' 'stress.biotic.PR-proteins.NPR.NPR1' 'niben101scf14780_105875-112100' '(at1g64280 : 522.0) This gene is a key regulator of the salicylic acid (SA)-mediated systemic acquired resistance (SAR) pathway. It is similar to the transcription factor inhibitor I kappa B, and contains ankyrin repeats. It confers resistance to the pathogens Pseudomonas syringae and Peronospora parasitica in a dosage-dependent fashion. Although transgenic Arabidopsis plants overexpressing NPR1 acquire enhanced sensitivity to SA and (benzothiadiazole) BTH, they display no obvious detrimental morphological changes and do not have elevated pathogenesis-related gene expression until activated by inducers or pathogens.; NONEXPRESSER OF PR GENES 1 (NPR1); CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), NPR1/NIM1 like, C-terminal (InterPro:IPR021094), BTB/POZ fold (InterPro:IPR011333), Ankyrin repeat-containing domain (InterPro:IPR020683), BTB/POZ-like (InterPro:IPR000210), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein / BTB/POZ domain-containing protein (TAIR:AT4G26120.1); Has 5193 Blast hits to 3365 proteins in 257 species: Archae - 2; Bacteria - 309; Metazoa - 2278; Fungi - 110; Plants - 802; Viruses - 16; Other Eukaryotes - 1676 (source: NCBI BLink). & (reliability: 1044.0) & (original description: Putative NPR1, Description = Regulatory protein NPR1, PFAM = PF00651;PF12313;PF11900;PF13637)' T '20.1.7.12' 'stress.biotic.PR-proteins.plant defensins' '' '' '20.1.1001' 'stress.biotic' 'melezitose' 'commonly found in honeys and in honey dew produced by apids but lacking from plant nectar' M '20.2' 'stress.abiotic' 'nbv0.3scaffold13440_4312-6983' '(gnl|cdd|84687 : 259.0) no description available & (p13046|prr1_tobac : 258.0) Pathogenesis-related protein R major form precursor (Thaumatin-like protein E22) - Nicotiana tabacum (Common tobacco) & (at4g11650 : 249.0) osmotin-like protein; osmotin 34 (OSM34); INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress, defense response to bacterium, incompatible interaction, response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75050.1); Has 1614 Blast hits to 1589 proteins in 184 species: Archae - 0; Bacteria - 39; Metazoa - 52; Fungi - 83; Plants - 1427; Viruses - 3; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative olp, Description = Thaumatin-like protein, PFAM = PF00314)' T '20.2' 'stress.abiotic' 'nbv0.3scaffold16212_32686-37817' '(at2g26660 : 221.0) SPX domain gene 2 (SPX2); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 1 (TAIR:AT5G20150.1); Has 1206 Blast hits to 1202 proteins in 209 species: Archae - 0; Bacteria - 6; Metazoa - 245; Fungi - 512; Plants - 320; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|36376 : 162.0) no description available & (gnl|cdd|66759 : 92.4) no description available & (reliability: 442.0) & (original description: Putative SPX2, Description = SPX domain-containing protein 2, PFAM = PF03105;PF03105)' T '20.2' 'stress.abiotic' 'nbv0.3scaffold21450_8542-18652' '(at5g62130 : 430.0) Per1-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Per1-like (InterPro:IPR007217); BEST Arabidopsis thaliana protein match is: Per1-like family protein (TAIR:AT1G16560.3). & (gnl|cdd|86533 : 323.0) no description available & (gnl|cdd|38181 : 305.0) no description available & (reliability: 826.0) & (original description: Putative NtPer1, Description = Per1 protein, PFAM = PF04080)' T '20.2' 'stress.abiotic' 'nbv0.3scaffold33071_15201-20969' '(at3g01420 : 332.0) Encodes an alpha-dioxygenase involved in protection against oxidative stress and cell death. Induced in response to Salicylic acid and oxidative stress. Independent of NPR1 in induction by salicylic acid.; DOX1; FUNCTIONS IN: lipoxygenase activity; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Haem peroxidase, animal (InterPro:IPR002007); BEST Arabidopsis thaliana protein match is: alpha dioxygenase (TAIR:AT1G73680.1); Has 1465 Blast hits to 1381 proteins in 214 species: Archae - 0; Bacteria - 94; Metazoa - 1085; Fungi - 168; Plants - 70; Viruses - 1; Other Eukaryotes - 47 (source: NCBI BLink). & (gnl|cdd|66752 : 105.0) no description available & (reliability: 664.0) & (original description: Putative adox2, Description = Pathogen-inducible alpha-dioxygenase, PFAM = PF03098)' T '20.2' 'stress.abiotic' 'nbv0.3scaffold35377_15979-20167' '(at5g20150 : 214.0) SPX domain gene 1 (SPX1); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 2 (TAIR:AT2G26660.1); Has 1126 Blast hits to 1124 proteins in 197 species: Archae - 3; Bacteria - 7; Metazoa - 241; Fungi - 471; Plants - 313; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|36376 : 165.0) no description available & (gnl|cdd|66759 : 97.4) no description available & (reliability: 428.0) & (original description: Putative SPX1, Description = SPX domain-containing protein 1, PFAM = PF03105)' T '20.2' 'stress.abiotic' 'nbv0.3scaffold43356_2160-5656' '(at2g37570 : 605.0) encodes a protein that can complement the salt-sensitive phenotype of a calcineurin (CaN)-deficient yeast mutant. This gene occurs in a single-copy and is 75% identical to tobacco SLT1 gene.; sodium- and lithium-tolerant 1 (SLT1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: hyperosmotic salinity response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G02480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1210.0) & (original description: Putative SLT1, Description = Expressed protein, PFAM = )' T '20.2' 'stress.abiotic' 'nbv0.5scaffold250_26057-33157' '(at3g15620 : 818.0) Required for photorepair of 6-4 photoproducts in Arabidopsis thaliana.; UV REPAIR DEFECTIVE 3 (UVR3); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101); BEST Arabidopsis thaliana protein match is: cryptochrome 3 (TAIR:AT5G24850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35355 : 517.0) no description available & (gnl|cdd|86321 : 297.0) no description available & (p40115|phr1_sinal : 142.0) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA photolyase) (Photoreactivating enzyme) - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 1636.0) & (original description: Putative UVR3, Description = (6-4)DNA photolyase, PFAM = PF00875;PF03441)' T '20.2' 'stress.abiotic' 'nbv0.5scaffold2766_6801-17549' '(at5g15330 : 230.0) SPX domain gene 4 (SPX4); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 1 (TAIR:AT5G20150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36376 : 126.0) no description available & (gnl|cdd|66759 : 85.1) no description available & (reliability: 460.0) & (original description: Putative SPX4, Description = SPX domain-containing protein 4, PFAM = PF03105;PF03105)' T '20.2' 'stress.abiotic' 'nbv0.5scaffold3538_138424-247271' '(at3g11930 : 112.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G58450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative BnaA03g32010D, Description = Adenine nucleotide alpha hydrolases-like superfamily protein, putative, PFAM = PF00582)' T '20.2' 'stress.abiotic' 'nbv0.5scaffold6581_8443-12107' '(at5g52060 : 298.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 1 (BAG1); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 3 (TAIR:AT5G07220.1); Has 385 Blast hits to 385 proteins in 61 species: Archae - 0; Bacteria - 4; Metazoa - 126; Fungi - 8; Plants - 222; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|39562 : 154.0) no description available & (gnl|cdd|29214 : 102.0) no description available & (reliability: 596.0) & (original description: Putative BAG1, Description = BAG family molecular chaperone regulator 1, PFAM = PF00240;PF02179)' T '20.2' 'stress.abiotic' 'niben044scf00005828ctg007_9444-14895' '(at2g30105 : 104.0) CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G07910.1). & (gnl|cdd|29214 : 81.0) no description available & (reliability: 194.8) & (original description: Putative IRL8, Description = BCL-2-associated athanogene 4 isoform 1, PFAM = PF02179;PF00240)' T '20.2' 'stress.abiotic' 'niben044scf00011617ctg000_1838-5722' '(at4g39640 : 612.0) The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in vascular tissues (predominantly phloem) of leaves and is involved in the degradation of glutathione. The encoded enzyme also mitigates oxidative stress by metabolizing GSSG (oxidized form of GSH - glutathione) in the apoplast.; gamma-glutamyl transpeptidase 1 (GGT1); FUNCTIONS IN: gamma-glutamyltransferase activity, glutathione gamma-glutamylcysteinyltransferase activity; INVOLVED IN: response to oxidative stress, glutathione catabolic process; LOCATED IN: apoplast, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-glutamyltranspeptidase (InterPro:IPR000101); BEST Arabidopsis thaliana protein match is: gamma-glutamyl transpeptidase 2 (TAIR:AT4G39650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37621 : 506.0) no description available & (gnl|cdd|85189 : 441.0) no description available & (reliability: 1224.0) & (original description: Putative GGT1, Description = Gamma-glutamyltranspeptidase 1, PFAM = PF01019)' T '20.2' 'stress.abiotic' 'niben044scf00014217ctg014_8160-22239' '(at5g64940 : 1076.0) Encodes a member of ATH subfamily of ATP-binding cassette (ABC) proteins.; ABC2 homolog 13 (ATH13); FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G07700.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36449 : 424.0) no description available & (gnl|cdd|31005 : 406.0) no description available & (reliability: 2152.0) & (original description: Putative aarF, Description = ABC1 family protein, PFAM = PF03109)' T '20.2' 'stress.abiotic' 'niben044scf00017779ctg002_1665-8734' '(at3g47860 : 390.0) Encodes a chloroplastic lipocalin AtCHL. Located in thylakoid lumen. Involved in the protection of thylakoidal membrane lipids against reactive oxygen species, especially singlet oxygen, produced upon excess light.; chloroplastic lipocalin (CHL); FUNCTIONS IN: binding; INVOLVED IN: response to oxidative stress; LOCATED IN: thylakoid lumen, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipocalin-like (InterPro:IPR013208), Lipocalin conserved site (InterPro:IPR022272), Calycin (InterPro:IPR012674), Calycin-like (InterPro:IPR011038); Has 184 Blast hits to 184 proteins in 68 species: Archae - 0; Bacteria - 14; Metazoa - 66; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|40021 : 202.0) no description available & (reliability: 780.0) & (original description: Putative CHL, Description = Chloroplastic lipocalin, PFAM = PF08212)' T '20.2' 'stress.abiotic' 'niben044scf00017875ctg008_30636-33284' '(at4g11650 : 284.0) osmotin-like protein; osmotin 34 (OSM34); INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress, defense response to bacterium, incompatible interaction, response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75050.1); Has 1614 Blast hits to 1589 proteins in 184 species: Archae - 0; Bacteria - 39; Metazoa - 52; Fungi - 83; Plants - 1427; Viruses - 3; Other Eukaryotes - 10 (source: NCBI BLink). & (p14170|osmo_tobac : 263.0) Osmotin precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84687 : 260.0) no description available & (reliability: 568.0) & (original description: Putative tlp, Description = Thaumatin-like protein, PFAM = PF00314)' T '20.2' 'stress.abiotic' 'niben044scf00018435ctg004_3672-7336' '(at5g52060 : 300.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 1 (BAG1); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 3 (TAIR:AT5G07220.1); Has 385 Blast hits to 385 proteins in 61 species: Archae - 0; Bacteria - 4; Metazoa - 126; Fungi - 8; Plants - 222; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|39562 : 151.0) no description available & (gnl|cdd|29214 : 102.0) no description available & (reliability: 600.0) & (original description: Putative BAG1, Description = BAG family molecular chaperone regulator 1, PFAM = PF00240;PF02179)' T '20.2' 'stress.abiotic' 'niben044scf00019334ctg000_3740-10144' '(at1g16560 : 390.0) Per1-like family protein; CONTAINS InterPro DOMAIN/s: Per1-like (InterPro:IPR007217); BEST Arabidopsis thaliana protein match is: Per1-like family protein (TAIR:AT5G62130.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86533 : 313.0) no description available & (gnl|cdd|38181 : 295.0) no description available & (reliability: 780.0) & (original description: Putative BnaC08g38330D, Description = BnaC08g38330D protein, PFAM = PF04080)' T '20.2' 'stress.abiotic' 'niben044scf00028352ctg007_38582-41160' '(at2g47770 : 135.0) Encodes a membrane-bound protein designated AtTSPO (Arabidopsis thaliana TSPO-related). AtTSPO is related to the bacterial outer membrane tryptophan-rich sensory protein (TspO) and the mammalian mitochondrial 18 kDa Translocator Protein (18 kDa TSPO), members of the TspO/MBR domain-containing membrane proteins. Mainly detected in dry seeds, but can be induced in vegetative tissues by osmotic or salt stress or abscisic acid treatment. Located in endoplasmic reticulum and the Golgi stacks.; TSPO(outer membrane tryptophan-rich sensory protein)-related (TSPO); CONTAINS InterPro DOMAIN/s: TspO/MBR-related protein (InterPro:IPR004307); Has 567 Blast hits to 567 proteins in 188 species: Archae - 24; Bacteria - 226; Metazoa - 151; Fungi - 6; Plants - 53; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative TSPO, Description = Translocator protein homolog, PFAM = PF03073)' T '20.2' 'stress.abiotic' 'niben044scf00034160ctg007_1-4119' '(at2g37570 : 714.0) encodes a protein that can complement the salt-sensitive phenotype of a calcineurin (CaN)-deficient yeast mutant. This gene occurs in a single-copy and is 75% identical to tobacco SLT1 gene.; sodium- and lithium-tolerant 1 (SLT1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: hyperosmotic salinity response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G02480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1428.0) & (original description: Putative SLT1, Description = Expressed protein, PFAM = )' T '20.2' 'stress.abiotic' 'niben044scf00047784ctg002_1853-4524' '(p13046|prr1_tobac : 256.0) Pathogenesis-related protein R major form precursor (Thaumatin-like protein E22) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84687 : 256.0) no description available & (at4g11650 : 247.0) osmotin-like protein; osmotin 34 (OSM34); INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress, defense response to bacterium, incompatible interaction, response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75050.1); Has 1614 Blast hits to 1589 proteins in 184 species: Archae - 0; Bacteria - 39; Metazoa - 52; Fungi - 83; Plants - 1427; Viruses - 3; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 494.0) & (original description: Putative olp, Description = Thaumatin-like protein, PFAM = PF00314)' T '20.2' 'stress.abiotic' 'niben101scf00119_90681-95096' '(at2g28790 : 350.0) Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75800.1); Has 1542 Blast hits to 1521 proteins in 166 species: Archae - 0; Bacteria - 19; Metazoa - 54; Fungi - 86; Plants - 1377; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|47535 : 286.0) no description available & (q9fsg7|tp1a_maldo : 165.0) Thaumatin-like protein 1a precursor (Allergen Mal d 2) (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 700.0) & (original description: Putative olp, Description = Thaumatin-like protein, PFAM = PF00314)' T '20.2' 'stress.abiotic' 'niben101scf00258_301065-307370' '(at1g16560 : 394.0) Per1-like family protein; CONTAINS InterPro DOMAIN/s: Per1-like (InterPro:IPR007217); BEST Arabidopsis thaliana protein match is: Per1-like family protein (TAIR:AT5G62130.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86533 : 315.0) no description available & (gnl|cdd|38181 : 298.0) no description available & (reliability: 788.0) & (original description: Putative NtPer1, Description = Per1 protein, PFAM = PF04080)' T '20.2' 'stress.abiotic' 'niben101scf00282_431123-436322' '(at5g52060 : 303.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 1 (BAG1); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 3 (TAIR:AT5G07220.1); Has 385 Blast hits to 385 proteins in 61 species: Archae - 0; Bacteria - 4; Metazoa - 126; Fungi - 8; Plants - 222; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|39562 : 150.0) no description available & (gnl|cdd|29214 : 101.0) no description available & (reliability: 606.0) & (original description: Putative BAG1, Description = BAG family molecular chaperone regulator 1, PFAM = PF02179)' T '20.2' 'stress.abiotic' 'niben101scf00297_9725-12737' '(at4g21860 : 216.0) methionine sulfoxide reductase B 2 (MSRB2); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B3 (TAIR:AT4G04800.1). & (gnl|cdd|36074 : 200.0) no description available & (gnl|cdd|85585 : 175.0) no description available & (reliability: 394.0) & (original description: Putative msr1, Description = Methionine sulfoxide reductase, PFAM = PF01641)' T '20.2' 'stress.abiotic' 'niben101scf00627_573491-577311' '(at5g52060 : 273.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 1 (BAG1); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 3 (TAIR:AT5G07220.1); Has 385 Blast hits to 385 proteins in 61 species: Archae - 0; Bacteria - 4; Metazoa - 126; Fungi - 8; Plants - 222; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|39562 : 139.0) no description available & (gnl|cdd|29214 : 96.1) no description available & (reliability: 546.0) & (original description: Putative BAG1, Description = BAG family molecular chaperone regulator 1, PFAM = PF00240;PF02179)' T '20.2' 'stress.abiotic' 'niben101scf01177_264885-273322' '(at4g39640 : 389.0) The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in vascular tissues (predominantly phloem) of leaves and is involved in the degradation of glutathione. The encoded enzyme also mitigates oxidative stress by metabolizing GSSG (oxidized form of GSH - glutathione) in the apoplast.; gamma-glutamyl transpeptidase 1 (GGT1); FUNCTIONS IN: gamma-glutamyltransferase activity, glutathione gamma-glutamylcysteinyltransferase activity; INVOLVED IN: response to oxidative stress, glutathione catabolic process; LOCATED IN: apoplast, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-glutamyltranspeptidase (InterPro:IPR000101); BEST Arabidopsis thaliana protein match is: gamma-glutamyl transpeptidase 2 (TAIR:AT4G39650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37621 : 318.0) no description available & (gnl|cdd|85189 : 266.0) no description available & (reliability: 778.0) & (original description: Putative GGT4, Description = Putative inactive gamma-glutamyltranspeptidase 4, PFAM = PF01019)' T '20.2' 'stress.abiotic' 'niben101scf01272_127990-145983' '(at1g49670 : 907.0) molecular function has not been defined. Was shown involved in oxidative stress tolerance.; NQR; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: response to oxidative stress, metabolic process; LOCATED IN: mitochondrion, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198), GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Quinone oxidoreductase/zeta-crystallin, conserved site (InterPro:IPR002364), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G37980.1). & (gnl|cdd|39371 : 225.0) no description available & (gnl|cdd|32313 : 195.0) no description available & (reliability: 1814.0) & (original description: Putative Zadh2, Description = Zinc-binding alcohol dehydrogenase domain-containing protein 2, PFAM = PF00106;PF08240;PF00107)' T '20.2' 'stress.abiotic' 'niben101scf01400_77860-80537' '(p13046|prr1_tobac : 424.0) Pathogenesis-related protein R major form precursor (Thaumatin-like protein E22) - Nicotiana tabacum (Common tobacco) & (at4g11650 : 295.0) osmotin-like protein; osmotin 34 (OSM34); INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress, defense response to bacterium, incompatible interaction, response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75050.1); Has 1614 Blast hits to 1589 proteins in 184 species: Archae - 0; Bacteria - 39; Metazoa - 52; Fungi - 83; Plants - 1427; Viruses - 3; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|84687 : 295.0) no description available & (reliability: 590.0) & (original description: Putative olp, Description = Thaumatin-like protein, PFAM = PF00314)' T '20.2' 'stress.abiotic' 'niben101scf02771_174675-178153' '(at2g37570 : 739.0) encodes a protein that can complement the salt-sensitive phenotype of a calcineurin (CaN)-deficient yeast mutant. This gene occurs in a single-copy and is 75% identical to tobacco SLT1 gene.; sodium- and lithium-tolerant 1 (SLT1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: hyperosmotic salinity response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G02480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1478.0) & (original description: Putative SLT1, Description = Expressed protein, PFAM = )' T '20.2' 'stress.abiotic' 'niben101scf02854_1078910-1085364' '(at1g16560 : 394.0) Per1-like family protein; CONTAINS InterPro DOMAIN/s: Per1-like (InterPro:IPR007217); BEST Arabidopsis thaliana protein match is: Per1-like family protein (TAIR:AT5G62130.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86533 : 316.0) no description available & (gnl|cdd|38181 : 305.0) no description available & (reliability: 788.0) & (original description: Putative BnaC07g26330D, Description = BnaC07g26330D protein, PFAM = PF04080)' T '20.2' 'stress.abiotic' 'niben101scf03222_43994-50162' '(at2g26660 : 214.0) SPX domain gene 2 (SPX2); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 1 (TAIR:AT5G20150.1); Has 1206 Blast hits to 1202 proteins in 209 species: Archae - 0; Bacteria - 6; Metazoa - 245; Fungi - 512; Plants - 320; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|36376 : 160.0) no description available & (gnl|cdd|66759 : 94.7) no description available & (reliability: 428.0) & (original description: Putative SPX1, Description = SPX domain-containing protein 1, PFAM = PF03105;PF03105)' T '20.2' 'stress.abiotic' 'niben101scf03599_59789-64512' '(at2g45130 : 297.0) SPX domain gene 3 (SPX3); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 1 (TAIR:AT5G20150.1); Has 942 Blast hits to 942 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 232; Fungi - 375; Plants - 276; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|36376 : 200.0) no description available & (gnl|cdd|66759 : 113.0) no description available & (reliability: 594.0) & (original description: Putative SPX3, Description = SPX domain-containing protein 3, PFAM = PF03105;PF03105)' T '20.2' 'stress.abiotic' 'niben101scf03832_282055-293071' '(at5g20150 : 251.0) SPX domain gene 1 (SPX1); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 2 (TAIR:AT2G26660.1); Has 1126 Blast hits to 1124 proteins in 197 species: Archae - 3; Bacteria - 7; Metazoa - 241; Fungi - 471; Plants - 313; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|36376 : 171.0) no description available & (gnl|cdd|66759 : 99.7) no description available & (reliability: 502.0) & (original description: Putative SPX1, Description = IDS4-like protein, PFAM = PF03105)' T '20.2' 'stress.abiotic' 'niben101scf03871_427496-431533' '(at2g45130 : 113.0) SPX domain gene 3 (SPX3); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 1 (TAIR:AT5G20150.1); Has 942 Blast hits to 942 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 232; Fungi - 375; Plants - 276; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|36376 : 100.0) no description available & (reliability: 226.0) & (original description: Putative SPX1, Description = SPX domain-containing protein 3, PFAM = )' T '20.2' 'stress.abiotic' 'niben101scf04133_124356-137162' '(at5g15330 : 300.0) SPX domain gene 4 (SPX4); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 1 (TAIR:AT5G20150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36376 : 191.0) no description available & (gnl|cdd|66759 : 107.0) no description available & (reliability: 600.0) & (original description: Putative SPX1, Description = Xenotropic and polytropic murine leukemia virus receptor ids-4, putative, PFAM = PF03105;PF03105)' T '20.2' 'stress.abiotic' 'niben101scf04184_229098-245892' '(gnl|cdd|38557 : 228.0) no description available & (at5g60340 : 221.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: oxidoreductase activity, ATP binding; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32119 : 135.0) no description available & (reliability: 442.0) & (original description: Putative AAK6, Description = Adenylate kinase isoenzyme 6 homolog, PFAM = PF13238;PF09810)' T '20.2' 'stress.abiotic' 'niben101scf04217_936436-957000' '(at5g62130 : 435.0) Per1-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Per1-like (InterPro:IPR007217); BEST Arabidopsis thaliana protein match is: Per1-like family protein (TAIR:AT1G16560.3). & (gnl|cdd|86533 : 323.0) no description available & (gnl|cdd|38181 : 304.0) no description available & (reliability: 832.0) & (original description: Putative NtPer1, Description = Per1 protein, PFAM = PF04080)' T '20.2' 'stress.abiotic' 'niben101scf04490_4869-7985' '(at2g37570 : 658.0) encodes a protein that can complement the salt-sensitive phenotype of a calcineurin (CaN)-deficient yeast mutant. This gene occurs in a single-copy and is 75% identical to tobacco SLT1 gene.; sodium- and lithium-tolerant 1 (SLT1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: hyperosmotic salinity response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G02480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1316.0) & (original description: Putative SLT1, Description = Expressed protein, PFAM = )' T '20.2' 'stress.abiotic' 'niben101scf04626_66127-75002' '(at3g01420 : 964.0) Encodes an alpha-dioxygenase involved in protection against oxidative stress and cell death. Induced in response to Salicylic acid and oxidative stress. Independent of NPR1 in induction by salicylic acid.; DOX1; FUNCTIONS IN: lipoxygenase activity; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Haem peroxidase, animal (InterPro:IPR002007); BEST Arabidopsis thaliana protein match is: alpha dioxygenase (TAIR:AT1G73680.1); Has 1465 Blast hits to 1381 proteins in 214 species: Archae - 0; Bacteria - 94; Metazoa - 1085; Fungi - 168; Plants - 70; Viruses - 1; Other Eukaryotes - 47 (source: NCBI BLink). & (gnl|cdd|66752 : 416.0) no description available & (gnl|cdd|37619 : 389.0) no description available & (reliability: 1928.0) & (original description: Putative DOX1, Description = Alpha-dioxygenase 1, PFAM = PF03098)' T '20.2' 'stress.abiotic' 'niben101scf05372_540610-544439' '(gnl|cdd|38557 : 154.0) no description available & (at5g60340 : 122.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: oxidoreductase activity, ATP binding; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32119 : 86.9) no description available & (reliability: 244.0) & (original description: Putative ak6, Description = AK6, PFAM = PF13238)' T '20.2' 'stress.abiotic' 'niben101scf05492_13207-27195' '(at5g64940 : 1066.0) Encodes a member of ATH subfamily of ATP-binding cassette (ABC) proteins.; ABC2 homolog 13 (ATH13); FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G07700.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36449 : 419.0) no description available & (gnl|cdd|31005 : 401.0) no description available & (reliability: 2132.0) & (original description: Putative AKC4, Description = ABC-1-like kinase, PFAM = PF03109)' T '20.2' 'stress.abiotic' 'niben101scf05824_1576462-1583939' '(at5g07220 : 170.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 3 (BAG3); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 2 (TAIR:AT5G62100.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29214 : 96.4) no description available & (gnl|cdd|39562 : 89.7) no description available & (reliability: 340.0) & (original description: Putative Sb03g038830, Description = Putative uncharacterized protein Sb03g038830, PFAM = PF02179;PF00240)' T '20.2' 'stress.abiotic' 'niben101scf05824_1576563-1583936' '(at5g07220 : 150.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 3 (BAG3); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 2 (TAIR:AT5G62100.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29214 : 97.2) no description available & (gnl|cdd|39562 : 83.2) no description available & (reliability: 300.0) & (original description: Putative BAG1, Description = BAG family molecular chaperone regulator, PFAM = PF00240;PF02179)' T '20.2' 'stress.abiotic' 'niben101scf06347_492435-496882' '(at2g26660 : 302.0) SPX domain gene 2 (SPX2); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 1 (TAIR:AT5G20150.1); Has 1206 Blast hits to 1202 proteins in 209 species: Archae - 0; Bacteria - 6; Metazoa - 245; Fungi - 512; Plants - 320; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|36376 : 201.0) no description available & (gnl|cdd|66759 : 116.0) no description available & (reliability: 604.0) & (original description: Putative SPX2, Description = SPX domain-containing protein 2, PFAM = PF03105;PF03105)' T '20.2' 'stress.abiotic' 'niben101scf06387_111617-116499' '(at1g16560 : 401.0) Per1-like family protein; CONTAINS InterPro DOMAIN/s: Per1-like (InterPro:IPR007217); BEST Arabidopsis thaliana protein match is: Per1-like family protein (TAIR:AT5G62130.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38181 : 300.0) no description available & (gnl|cdd|86533 : 286.0) no description available & (reliability: 802.0) & (original description: Putative BnaC09g26620D, Description = BnaC09g26620D protein, PFAM = PF04080)' T '20.2' 'stress.abiotic' 'niben101scf06457_42422-53599' '(at5g15330 : 307.0) SPX domain gene 4 (SPX4); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 1 (TAIR:AT5G20150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36376 : 190.0) no description available & (gnl|cdd|66759 : 108.0) no description available & (reliability: 614.0) & (original description: Putative SPX4, Description = SPX domain-containing protein 4, PFAM = PF03105;PF03105;PF03105)' T '20.2' 'stress.abiotic' 'niben101scf06628_93915-96493' '(at2g47770 : 142.0) Encodes a membrane-bound protein designated AtTSPO (Arabidopsis thaliana TSPO-related). AtTSPO is related to the bacterial outer membrane tryptophan-rich sensory protein (TspO) and the mammalian mitochondrial 18 kDa Translocator Protein (18 kDa TSPO), members of the TspO/MBR domain-containing membrane proteins. Mainly detected in dry seeds, but can be induced in vegetative tissues by osmotic or salt stress or abscisic acid treatment. Located in endoplasmic reticulum and the Golgi stacks.; TSPO(outer membrane tryptophan-rich sensory protein)-related (TSPO); CONTAINS InterPro DOMAIN/s: TspO/MBR-related protein (InterPro:IPR004307); Has 567 Blast hits to 567 proteins in 188 species: Archae - 24; Bacteria - 226; Metazoa - 151; Fungi - 6; Plants - 53; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative TSPO, Description = Translocator protein homolog, PFAM = PF03073)' T '20.2' 'stress.abiotic' 'niben101scf06628_94137-99135' '(at2g47770 : 115.0) Encodes a membrane-bound protein designated AtTSPO (Arabidopsis thaliana TSPO-related). AtTSPO is related to the bacterial outer membrane tryptophan-rich sensory protein (TspO) and the mammalian mitochondrial 18 kDa Translocator Protein (18 kDa TSPO), members of the TspO/MBR domain-containing membrane proteins. Mainly detected in dry seeds, but can be induced in vegetative tissues by osmotic or salt stress or abscisic acid treatment. Located in endoplasmic reticulum and the Golgi stacks.; TSPO(outer membrane tryptophan-rich sensory protein)-related (TSPO); CONTAINS InterPro DOMAIN/s: TspO/MBR-related protein (InterPro:IPR004307); Has 567 Blast hits to 567 proteins in 188 species: Archae - 24; Bacteria - 226; Metazoa - 151; Fungi - 6; Plants - 53; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative TSPO, Description = Benzodiazepine receptor-related family protein, PFAM = PF03073)' T '20.2' 'stress.abiotic' 'niben101scf07070_225697-243077' '(at3g01420 : 989.0) Encodes an alpha-dioxygenase involved in protection against oxidative stress and cell death. Induced in response to Salicylic acid and oxidative stress. Independent of NPR1 in induction by salicylic acid.; DOX1; FUNCTIONS IN: lipoxygenase activity; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Haem peroxidase, animal (InterPro:IPR002007); BEST Arabidopsis thaliana protein match is: alpha dioxygenase (TAIR:AT1G73680.1); Has 1465 Blast hits to 1381 proteins in 214 species: Archae - 0; Bacteria - 94; Metazoa - 1085; Fungi - 168; Plants - 70; Viruses - 1; Other Eukaryotes - 47 (source: NCBI BLink). & (gnl|cdd|66752 : 440.0) no description available & (gnl|cdd|37619 : 396.0) no description available & (reliability: 1978.0) & (original description: Putative DOX1, Description = Alpha-dioxygenase 1, PFAM = PF03098)' T '20.2' 'stress.abiotic' 'niben101scf07391_11358-15266' '(at5g07220 : 201.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 3 (BAG3); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 2 (TAIR:AT5G62100.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39562 : 127.0) no description available & (gnl|cdd|29214 : 91.0) no description available & (reliability: 402.0) & (original description: Putative BAG1, Description = BAG family molecular chaperone regulator 1, PFAM = PF00240;PF02179)' T '20.2' 'stress.abiotic' 'niben101scf07650_375082-378584' '(at2g37570 : 603.0) encodes a protein that can complement the salt-sensitive phenotype of a calcineurin (CaN)-deficient yeast mutant. This gene occurs in a single-copy and is 75% identical to tobacco SLT1 gene.; sodium- and lithium-tolerant 1 (SLT1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: hyperosmotic salinity response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G02480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1206.0) & (original description: Putative FYD, Description = F13M22.7, PFAM = )' T '20.2' 'stress.abiotic' 'niben101scf09017_41382-46848' '(at2g30105 : 97.8) CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G07910.1). & (reliability: 183.4) & (original description: Putative IRL8, Description = BCL-2-associated athanogene 4 isoform 3, PFAM = PF00240;PF02179)' T '20.2' 'stress.abiotic' 'niben101scf09044_158798-161541' '(p14170|osmo_tobac : 471.0) Osmotin precursor - Nicotiana tabacum (Common tobacco) & (at4g11650 : 305.0) osmotin-like protein; osmotin 34 (OSM34); INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress, defense response to bacterium, incompatible interaction, response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75050.1); Has 1614 Blast hits to 1589 proteins in 184 species: Archae - 0; Bacteria - 39; Metazoa - 52; Fungi - 83; Plants - 1427; Viruses - 3; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|84687 : 293.0) no description available & (reliability: 610.0) & (original description: Putative olp, Description = Thaumatin-like protein, PFAM = PF00314)' T '20.2' 'stress.abiotic' 'niben101scf09044_172935-175738' '(p25871|olpa_tobac : 460.0) Osmotin-like protein precursor (Pathogenesis-related protein PR-5d) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47535 : 298.0) no description available & (at4g11650 : 282.0) osmotin-like protein; osmotin 34 (OSM34); INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress, defense response to bacterium, incompatible interaction, response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75050.1); Has 1614 Blast hits to 1589 proteins in 184 species: Archae - 0; Bacteria - 39; Metazoa - 52; Fungi - 83; Plants - 1427; Viruses - 3; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 564.0) & (original description: Putative OLPA, Description = Osmotin-like protein, PFAM = PF00314)' T '20.2' 'stress.abiotic' 'niben101scf09610_92253-109559' '(at3g11930 : 157.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G58450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30165 : 97.9) no description available & (reliability: 302.0) & (original description: Putative Sb01g021200, Description = Putative uncharacterized protein Sb01g021200, PFAM = PF00582)' T '20.2' 'stress.abiotic' 'niben101scf10342_233482-239048' '(at1g16560 : 399.0) Per1-like family protein; CONTAINS InterPro DOMAIN/s: Per1-like (InterPro:IPR007217); BEST Arabidopsis thaliana protein match is: Per1-like family protein (TAIR:AT5G62130.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38181 : 304.0) no description available & (gnl|cdd|86533 : 292.0) no description available & (reliability: 798.0) & (original description: Putative NtPer1, Description = Per1 protein, PFAM = PF04080)' T '20.2' 'stress.abiotic' 'niben101scf10753_109000-113117' '(at5g07220 : 204.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 3 (BAG3); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 2 (TAIR:AT5G62100.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39562 : 126.0) no description available & (gnl|cdd|29214 : 91.4) no description available & (reliability: 408.0) & (original description: Putative BAG3, Description = BAG family molecular chaperone regulator 3, PFAM = PF00240;PF02179)' T '20.2' 'stress.abiotic' 'niben101scf11774_72906-81478' '(at3g47860 : 399.0) Encodes a chloroplastic lipocalin AtCHL. Located in thylakoid lumen. Involved in the protection of thylakoidal membrane lipids against reactive oxygen species, especially singlet oxygen, produced upon excess light.; chloroplastic lipocalin (CHL); FUNCTIONS IN: binding; INVOLVED IN: response to oxidative stress; LOCATED IN: thylakoid lumen, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipocalin-like (InterPro:IPR013208), Lipocalin conserved site (InterPro:IPR022272), Calycin (InterPro:IPR012674), Calycin-like (InterPro:IPR011038); Has 184 Blast hits to 184 proteins in 68 species: Archae - 0; Bacteria - 14; Metazoa - 66; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|40021 : 206.0) no description available & (reliability: 798.0) & (original description: Putative CHL, Description = Chloroplastic lipocalin, PFAM = PF08212)' T '20.2' 'stress.abiotic' 'niben101scf12135_10361-15191' '(at2g26660 : 305.0) SPX domain gene 2 (SPX2); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 1 (TAIR:AT5G20150.1); Has 1206 Blast hits to 1202 proteins in 209 species: Archae - 0; Bacteria - 6; Metazoa - 245; Fungi - 512; Plants - 320; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|36376 : 202.0) no description available & (gnl|cdd|66759 : 118.0) no description available & (reliability: 610.0) & (original description: Putative SPX2, Description = SPX domain-containing protein 2, PFAM = PF03105;PF03105)' T '20.2' 'stress.abiotic' 'niben101scf12154_121315-124817' '(at2g37570 : 739.0) encodes a protein that can complement the salt-sensitive phenotype of a calcineurin (CaN)-deficient yeast mutant. This gene occurs in a single-copy and is 75% identical to tobacco SLT1 gene.; sodium- and lithium-tolerant 1 (SLT1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: hyperosmotic salinity response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G02480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1478.0) & (original description: Putative SLT1, Description = Expressed protein, PFAM = )' T '20.2' 'stress.abiotic' 'niben101scf15979_192585-199771' '(at3g15620 : 818.0) Required for photorepair of 6-4 photoproducts in Arabidopsis thaliana.; UV REPAIR DEFECTIVE 3 (UVR3); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101); BEST Arabidopsis thaliana protein match is: cryptochrome 3 (TAIR:AT5G24850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35355 : 517.0) no description available & (gnl|cdd|86321 : 297.0) no description available & (p40115|phr1_sinal : 142.0) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA photolyase) (Photoreactivating enzyme) - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 1636.0) & (original description: Putative UVR3, Description = (6-4)DNA photolyase, PFAM = PF00875;PF03441)' T '20.2' 'stress.abiotic' 'niben101scf16007_112669-120312' '(at1g16560 : 474.0) Per1-like family protein; CONTAINS InterPro DOMAIN/s: Per1-like (InterPro:IPR007217); BEST Arabidopsis thaliana protein match is: Per1-like family protein (TAIR:AT5G62130.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86533 : 347.0) no description available & (gnl|cdd|38181 : 329.0) no description available & (reliability: 948.0) & (original description: Putative NtPer1, Description = Per1 protein, PFAM = PF04080)' T '20.2' 'stress.abiotic' 'niben101scf39514_225-3232' '(at4g05440 : 378.0) embryo sac development arrest 35 (EDA35); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: polar nucleus fusion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: D123 (InterPro:IPR009772); Has 352 Blast hits to 345 proteins in 166 species: Archae - 0; Bacteria - 0; Metazoa - 112; Fungi - 149; Plants - 53; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|38194 : 321.0) no description available & (gnl|cdd|87211 : 297.0) no description available & (reliability: 756.0) & (original description: Putative EDA35, Description = Cell division cycle protein 123 homolog, PFAM = PF07065)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold35_83369-96342' '(at3g22530 : 121.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14830.1); Has 77 Blast hits to 77 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative BnaA05g17110D, Description = Heat shock 22 kDa protein, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold1076_83292-89468' '(at2g46240 : 110.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Expression of BAG6 in leaves was strongly induced by heat stress. Knockout mutants exhibited enhanced susceptibility to fungal pathogen Botrytis cinerea. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 6 (BAG6); CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 5 (TAIR:AT1G12060.1); Has 21821 Blast hits to 15371 proteins in 1199 species: Archae - 184; Bacteria - 2603; Metazoa - 10110; Fungi - 2300; Plants - 994; Viruses - 95; Other Eukaryotes - 5535 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative PGSC0003DMG400000079, Description = , PFAM = PF02179;PF00612)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold2186_80346-83596' '(at4g14830 : 130.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G22530.1); Has 77 Blast hits to 77 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative BnaA05g17110D, Description = BnaA05g17110D protein, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold2213_7599-28050' '(at1g65280 : 460.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Protein of unknown function DUF3752 (InterPro:IPR022226); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G22080.2); Has 26180 Blast hits to 20391 proteins in 2424 species: Archae - 138; Bacteria - 5225; Metazoa - 9539; Fungi - 2558; Plants - 2202; Viruses - 36; Other Eukaryotes - 6482 (source: NCBI BLink). & (gnl|cdd|39390 : 131.0) no description available & (reliability: 920.0) & (original description: Putative BnaA09g23070D, Description = BnaA09g23070D protein, PFAM = PF00226;PF12572)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold3387_6232-11650' '(at2g20560 : 378.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT4G28480.1); Has 27936 Blast hits to 27733 proteins in 3449 species: Archae - 187; Bacteria - 10270; Metazoa - 4781; Fungi - 2609; Plants - 2869; Viruses - 17; Other Eukaryotes - 7203 (source: NCBI BLink). & (gnl|cdd|35933 : 224.0) no description available & (gnl|cdd|30832 : 215.0) no description available & (q04960|dnjh_cucsa : 94.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 756.0) & (original description: Putative hsp40, Description = Heat shock protein 40, PFAM = PF00226;PF01556)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold5458_17330-20630' '(at4g18880 : 284.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A4A (HSF A4A); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT5G45710.1); Has 2263 Blast hits to 2244 proteins in 239 species: Archae - 2; Bacteria - 4; Metazoa - 360; Fungi - 491; Plants - 856; Viruses - 0; Other Eukaryotes - 550 (source: NCBI BLink). & (gnl|cdd|35846 : 166.0) no description available & (gnl|cdd|84779 : 163.0) no description available & (reliability: 568.0) & (original description: Putative HSFA4A, Description = Heat stress transcription factor A-4a, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold6673_1-6611' '(at1g79940 : 598.0) J domain protein localized in ER membrane. Mutants have defective pollen germination.; ATERDJ2A; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion, integral to endoplasmic reticulum membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DnaJ / Sec63 Brl domains-containing protein (TAIR:AT4G21180.1). & (gnl|cdd|35940 : 248.0) no description available & (gnl|cdd|34966 : 136.0) no description available & (reliability: 1196.0) & (original description: Putative dnj45, Description = DnaJ / Sec63 Brl domains-containing protein, PFAM = PF02889;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold6748_32416-41875' '(at1g79940 : 709.0) J domain protein localized in ER membrane. Mutants have defective pollen germination.; ATERDJ2A; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion, integral to endoplasmic reticulum membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DnaJ / Sec63 Brl domains-containing protein (TAIR:AT4G21180.1). & (gnl|cdd|35940 : 256.0) no description available & (gnl|cdd|47902 : 163.0) no description available & (reliability: 1418.0) & (original description: Putative ERDJ2A, Description = DnaJ protein ERDJ2A, PFAM = PF02889;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold7950_33568-39540' '(at5g16820 : 338.0) Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes.; heat shock factor 3 (HSF3); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1E (TAIR:AT3G02990.1); Has 2455 Blast hits to 2420 proteins in 254 species: Archae - 0; Bacteria - 23; Metazoa - 373; Fungi - 496; Plants - 855; Viruses - 0; Other Eukaryotes - 708 (source: NCBI BLink). & (gnl|cdd|35846 : 214.0) no description available & (gnl|cdd|84779 : 212.0) no description available & (reliability: 676.0) & (original description: Putative HSFA1B, Description = Heat stress transcription factor A-1b, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold8427_13050-32392' '(at1g18700 : 647.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Thioredoxin-like fold (InterPro:IPR012336). & (reliability: 1294.0) & (original description: Putative At1g18700, Description = DNAJ heat shock N-terminal domain-containing protein, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold10309_10827-13417' '(p19244|hsp41_pea : 175.0) 22.7 kDa class IV heat shock protein precursor - Pisum sativum (Garden pea) & (at4g10250 : 164.0) Columbia endomembrane-localized small heat shock protein; ATHSP22.0; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to heat; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G07400.1); Has 7552 Blast hits to 7552 proteins in 1747 species: Archae - 200; Bacteria - 4479; Metazoa - 74; Fungi - 263; Plants - 1560; Viruses - 4; Other Eukaryotes - 972 (source: NCBI BLink). & (gnl|cdd|84439 : 102.0) no description available & (gnl|cdd|35929 : 91.7) no description available & (reliability: 328.0) & (original description: Putative hsp17, Description = 22.0 kDa class IV heat shock protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold11012_50639-57639' '(at1g24120 : 522.0) encodes a DnaJ-like protein similar to ARG1 and ARL2 that are both involved in root and hypocotyl gravitropism response. However, null mutation in this gene does not result in defects in gravitropism. Gene is expressed in all tissues examined.; ARG1-like 1 (ARL1); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: ARG1-like 2 (TAIR:AT1G59980.1); Has 24851 Blast hits to 24751 proteins in 3316 species: Archae - 174; Bacteria - 9800; Metazoa - 4410; Fungi - 2460; Plants - 2464; Viruses - 13; Other Eukaryotes - 5530 (source: NCBI BLink). & (gnl|cdd|35932 : 297.0) no description available & (gnl|cdd|30832 : 106.0) no description available & (reliability: 1044.0) & (original description: Putative ATJ16, Description = Chaperone protein dnaJ 16, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold13032_39178-42684' '(at4g18880 : 199.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A4A (HSF A4A); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT5G45710.1); Has 2263 Blast hits to 2244 proteins in 239 species: Archae - 2; Bacteria - 4; Metazoa - 360; Fungi - 491; Plants - 856; Viruses - 0; Other Eukaryotes - 550 (source: NCBI BLink). & (gnl|cdd|84779 : 157.0) no description available & (gnl|cdd|35846 : 156.0) no description available & (reliability: 398.0) & (original description: Putative HSF3, Description = HSF domain class transcription factor, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold13511_12742-18388' '(at5g56030 : 1048.0) A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c.; heat shock protein 81-2 (HSP81-2); CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 81.4 (TAIR:AT5G56000.1). & (p33126|hsp81_orysa : 1043.0) Heat shock protein 81-1 (HSP81-1) (Heat shock protein 82) - Oryza sativa (Rice) & (gnl|cdd|35242 : 832.0) no description available & (gnl|cdd|84591 : 766.0) no description available & (reliability: 2096.0) & (original description: Putative hspD, Description = Heat shock protein 90, PFAM = PF00183;PF02518)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold15348_5667-10545' '(at1g74250 : 398.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding, zinc ion binding, nucleic acid binding; INVOLVED IN: protein folding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Zinc finger, U1-type (InterPro:IPR003604), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DnaJ domain ;Myb-like DNA-binding domain (TAIR:AT3G11450.1); Has 93426 Blast hits to 65819 proteins in 3757 species: Archae - 599; Bacteria - 15939; Metazoa - 31666; Fungi - 9634; Plants - 4994; Viruses - 419; Other Eukaryotes - 30175 (source: NCBI BLink). & (gnl|cdd|35936 : 297.0) no description available & (reliability: 796.0) & (original description: Putative JJJ1, Description = DNAJ protein JJJ1 homolog, PFAM = PF12171;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold15995_17369-21309' '(at1g11040 : 211.0) HSP40/DnaJ peptide-binding protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: HSP40/DnaJ peptide-binding protein (TAIR:AT1G44160.1); Has 19507 Blast hits to 13358 proteins in 2831 species: Archae - 102; Bacteria - 8184; Metazoa - 2012; Fungi - 1146; Plants - 786; Viruses - 38; Other Eukaryotes - 7239 (source: NCBI BLink). & (gnl|cdd|35933 : 140.0) no description available & (gnl|cdd|30832 : 101.0) no description available & (q04960|dnjh_cucsa : 82.4) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 422.0) & (original description: Putative Os01g0875700, Description = Os01g0875700 protein, PFAM = PF01556;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold16078_33647-38462' '(at2g47440 : 621.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G62570.1); Has 357 Blast hits to 345 proteins in 102 species: Archae - 0; Bacteria - 6; Metazoa - 79; Fungi - 59; Plants - 180; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 1242.0) & (original description: Putative At3g62570, Description = AT3g62570/T12C14_270, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold17055_8006-12230' '(at3g05345 : 266.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G23240.1); Has 10844 Blast hits to 10844 proteins in 2367 species: Archae - 96; Bacteria - 5912; Metazoa - 1330; Fungi - 441; Plants - 721; Viruses - 3; Other Eukaryotes - 2341 (source: NCBI BLink). & (reliability: 532.0) & (original description: Putative At3g05345, Description = DnaJ domain-containing protein, PFAM = PF13459;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold23868_4962-13555' '(at3g62600 : 543.0) J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast. Forms a complex SDF2-ERdj3B-BiP that is required for the proper accumulation of the surface-exposed leucine-rich repeat receptor kinases EFR. EFR is involved in PAMP (pathogen associated molecular patterns) triggered immunity.; ATERDJ3B; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, PAMP-induced immunity; LOCATED IN: plasma membrane, endoplasmic reticulum lumen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT3G08910.1); Has 27934 Blast hits to 27869 proteins in 3473 species: Archae - 187; Bacteria - 10337; Metazoa - 4624; Fungi - 2578; Plants - 2760; Viruses - 17; Other Eukaryotes - 7431 (source: NCBI BLink). & (gnl|cdd|35932 : 353.0) no description available & (gnl|cdd|30832 : 253.0) no description available & (q04960|dnjh_cucsa : 160.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 1086.0) & (original description: Putative ERDJ3B, Description = DnaJ protein ERDJ3B, PFAM = PF01556;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold25324_15561-20749' '(at1g54850 : 171.0) HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G54840.1); Has 80 Blast hits to 80 proteins in 15 species: Archae - 0; Bacteria - 9; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative IDM2, Description = Alpha-crystallin domain of heat shock protein, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold26034_22643-26607' '(p26413|hsp70_soybn : 982.0) Heat shock 70 kDa protein - Glycine max (Soybean) & (at1g16030 : 974.0) heat shock protein 70B (Hsp70b); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: cytosol, cell wall, plasma membrane, chloroplast, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (TAIR:AT3G12580.1); Has 33913 Blast hits to 33562 proteins in 4835 species: Archae - 164; Bacteria - 16454; Metazoa - 3784; Fungi - 1785; Plants - 1262; Viruses - 309; Other Eukaryotes - 10155 (source: NCBI BLink). & (gnl|cdd|84440 : 891.0) no description available & (gnl|cdd|35323 : 889.0) no description available & (reliability: 1948.0) & (original description: Putative SSA3, Description = Heat shock protein SSA3, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold28581_3214-10853' '(at2g22360 : 539.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Chaperone DnaJ (InterPro:IPR012724), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT4G39960.1); Has 29493 Blast hits to 29023 proteins in 3518 species: Archae - 206; Bacteria - 11054; Metazoa - 4574; Fungi - 2545; Plants - 2863; Viruses - 57; Other Eukaryotes - 8194 (source: NCBI BLink). & (gnl|cdd|30832 : 400.0) no description available & (gnl|cdd|35934 : 236.0) no description available & (q04960|dnjh_cucsa : 134.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 1078.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF01556;PF00684;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold28887_94-5547' '(q04960|dnjh_cucsa : 568.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (at3g44110 : 526.0) homologous to the co-chaperon DNAJ protein from E coli; DNAJ homologue 3 (ATJ3); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, response to salt stress, regulation of ATPase activity; LOCATED IN: nucleolus, cell wall, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ homologue 2 (TAIR:AT5G22060.1); Has 26521 Blast hits to 26345 proteins in 3465 species: Archae - 213; Bacteria - 10015; Metazoa - 4280; Fungi - 2432; Plants - 2547; Viruses - 88; Other Eukaryotes - 6946 (source: NCBI BLink). & (gnl|cdd|35931 : 387.0) no description available & (gnl|cdd|30832 : 299.0) no description available & (reliability: 1052.0) & (original description: Putative ddj1, Description = DnaJ-like protein, PFAM = PF00684;PF00226;PF01556)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold29680_3739-9785' '(at1g79920 : 1264.0) Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 91 (TAIR:AT1G79930.1); Has 26399 Blast hits to 25673 proteins in 4386 species: Archae - 152; Bacteria - 11778; Metazoa - 3903; Fungi - 1562; Plants - 1156; Viruses - 127; Other Eukaryotes - 7721 (source: NCBI BLink). & (gnl|cdd|35326 : 857.0) no description available & (gnl|cdd|84440 : 433.0) no description available & (p09189|hsp7c_pethy : 269.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 2528.0) & (original description: Putative hspa4, Description = Heat shock protein 70 family, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold31671_1706-6033' '(at2g05230 : 602.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G05250.1); Has 13630 Blast hits to 13432 proteins in 2557 species: Archae - 75; Bacteria - 5761; Metazoa - 2469; Fungi - 964; Plants - 1524; Viruses - 9; Other Eukaryotes - 2828 (source: NCBI BLink). & (reliability: 1204.0) & (original description: Putative At2g05230, Description = At2g05250/F5G3.15, PFAM = PF11926;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold35732_8348-21663' '(at1g80030 : 528.0) Molecular chaperone Hsp40/DnaJ family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Chaperone DnaJ (InterPro:IPR012724), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT3G17830.1); Has 29578 Blast hits to 28478 proteins in 3517 species: Archae - 197; Bacteria - 11603; Metazoa - 4491; Fungi - 2484; Plants - 2799; Viruses - 20; Other Eukaryotes - 7984 (source: NCBI BLink). & (gnl|cdd|30832 : 379.0) no description available & (gnl|cdd|35934 : 210.0) no description available & (q04960|dnjh_cucsa : 131.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 1056.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF01556;PF00684;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold40357_1421-16271' '(at1g28210 : 468.0) DnaJ homolog AtJ1 (atj); ATJ1; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, zinc ion binding, nucleic acid binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Zinc finger, CCHC-type (InterPro:IPR001878), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: gametophytic factor 2 (TAIR:AT5G48030.1); Has 28171 Blast hits to 27206 proteins in 3463 species: Archae - 195; Bacteria - 10792; Metazoa - 4387; Fungi - 2267; Plants - 2533; Viruses - 17; Other Eukaryotes - 7980 (source: NCBI BLink). & (gnl|cdd|30832 : 368.0) no description available & (gnl|cdd|35934 : 214.0) no description available & (q04960|dnjh_cucsa : 135.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 936.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF00226;PF00684;PF01556)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold40374_12915-17177' '(at3g14200 : 132.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G72416.2); Has 21914 Blast hits to 21906 proteins in 3169 species: Archae - 155; Bacteria - 8965; Metazoa - 3686; Fungi - 1997; Plants - 2132; Viruses - 13; Other Eukaryotes - 4966 (source: NCBI BLink). & (gnl|cdd|30832 : 87.6) no description available & (reliability: 264.0) & (original description: Putative dnaJ, Description = Putative uncharacterized protein Sb10g006350, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold47604_12819-15705' '(at5g64360 : 105.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G09540.1); Has 2668 Blast hits to 2652 proteins in 821 species: Archae - 47; Bacteria - 1266; Metazoa - 509; Fungi - 114; Plants - 564; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative At5g64360, Description = AT5G64360 protein, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold48115_1893-4450' '(at4g10250 : 135.0) Columbia endomembrane-localized small heat shock protein; ATHSP22.0; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to heat; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G07400.1); Has 7552 Blast hits to 7552 proteins in 1747 species: Archae - 200; Bacteria - 4479; Metazoa - 74; Fungi - 263; Plants - 1560; Viruses - 4; Other Eukaryotes - 972 (source: NCBI BLink). & (p30236|hsp41_soybn : 135.0) 22.0 kDa class IV heat shock protein precursor - Glycine max (Soybean) & (gnl|cdd|35929 : 107.0) no description available & (gnl|cdd|84439 : 105.0) no description available & (reliability: 270.0) & (original description: Putative hsp17, Description = 22.0 kDa class IV heat shock protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold50569_9982-14969' '(q04960|dnjh_cucsa : 539.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (at3g44110 : 508.0) homologous to the co-chaperon DNAJ protein from E coli; DNAJ homologue 3 (ATJ3); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, response to salt stress, regulation of ATPase activity; LOCATED IN: nucleolus, cell wall, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ homologue 2 (TAIR:AT5G22060.1); Has 26521 Blast hits to 26345 proteins in 3465 species: Archae - 213; Bacteria - 10015; Metazoa - 4280; Fungi - 2432; Plants - 2547; Viruses - 88; Other Eukaryotes - 6946 (source: NCBI BLink). & (gnl|cdd|35931 : 390.0) no description available & (gnl|cdd|30832 : 306.0) no description available & (reliability: 1016.0) & (original description: Putative B38, Description = DnaJ homolog, PFAM = PF00226;PF00684;PF01556)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold54705_12595-14944' '(p09189|hsp7c_pethy : 191.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at5g02500 : 189.0) encodes a member of heat shock protein 70 family.; heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cold, response to virus, response to heat; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35324 : 149.0) no description available & (gnl|cdd|84440 : 131.0) no description available & (reliability: 378.0) & (original description: Putative hsc1, Description = Heat shock protein 70, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold55133_9225-12266' '(p09886|hs21c_pea : 133.0) Small heat shock protein, chloroplast precursor - Pisum sativum (Garden pea) & (at4g27670 : 128.0) chloroplast located small heat shock protein.; heat shock protein 21 (HSP21); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G51440.1); Has 6158 Blast hits to 6158 proteins in 1414 species: Archae - 225; Bacteria - 3528; Metazoa - 23; Fungi - 170; Plants - 1466; Viruses - 0; Other Eukaryotes - 746 (source: NCBI BLink). & (gnl|cdd|29382 : 84.5) no description available & (reliability: 256.0) & (original description: Putative cpsHSP, Description = Chloroplast small heat shock protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold56583_1341-5502' '(at1g79920 : 335.0) Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 91 (TAIR:AT1G79930.1); Has 26399 Blast hits to 25673 proteins in 4386 species: Archae - 152; Bacteria - 11778; Metazoa - 3903; Fungi - 1562; Plants - 1156; Viruses - 127; Other Eukaryotes - 7721 (source: NCBI BLink). & (gnl|cdd|35326 : 279.0) no description available & (gnl|cdd|84440 : 205.0) no description available & (p09189|hsp7c_pethy : 148.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 670.0) & (original description: Putative pss1, Description = Heat shock 70 kDa protein 4, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold58783_230-7001' '(at3g12170 : 283.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: J-domain protein 6 (TAIR:AT5G06910.1); Has 23895 Blast hits to 23888 proteins in 3317 species: Archae - 171; Bacteria - 9423; Metazoa - 4258; Fungi - 2263; Plants - 2420; Viruses - 67; Other Eukaryotes - 5293 (source: NCBI BLink). & (gnl|cdd|35938 : 207.0) no description available & (gnl|cdd|30832 : 96.1) no description available & (reliability: 566.0) & (original description: Putative ATJ6, Description = Chaperone protein dnaJ 6, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold61544_4184-11299' '(at5g49580 : 487.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G16680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35939 : 305.0) no description available & (gnl|cdd|84624 : 89.4) no description available & (reliability: 974.0) & (original description: Putative BnaC07g27310D, Description = BnaC07g27310D protein, PFAM = PF14901;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold61947_4089-8936' '(at5g16820 : 333.0) Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes.; heat shock factor 3 (HSF3); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1E (TAIR:AT3G02990.1); Has 2455 Blast hits to 2420 proteins in 254 species: Archae - 0; Bacteria - 23; Metazoa - 373; Fungi - 496; Plants - 855; Viruses - 0; Other Eukaryotes - 708 (source: NCBI BLink). & (gnl|cdd|84779 : 220.0) no description available & (gnl|cdd|35846 : 208.0) no description available & (reliability: 666.0) & (original description: Putative HSF8, Description = Heat shock factor protein HSF8, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold62292_5964-9276' '(at1g79920 : 175.0) Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 91 (TAIR:AT1G79930.1); Has 26399 Blast hits to 25673 proteins in 4386 species: Archae - 152; Bacteria - 11778; Metazoa - 3903; Fungi - 1562; Plants - 1156; Viruses - 127; Other Eukaryotes - 7721 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative ophh-56, Description = Heat shock protein (HSP110/SSE1 subfamily), PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold65281_1831-9178' '(p35016|enpl_catro : 1189.0) Endoplasmin homolog precursor (GRP94 homolog) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g24190 : 1136.0) encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues.; SHEPHERD (SHD); FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Molecular chaperone, heat shock protein, endoplasmin (InterPro:IPR015566), ATPase-like, ATP-binding domain (InterPro:IPR003594), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: heat shock protein 90.1 (TAIR:AT5G52640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35243 : 978.0) no description available & (gnl|cdd|84591 : 681.0) no description available & (reliability: 2272.0) & (original description: Putative HSP90, Description = Endoplasmin homolog, PFAM = PF00183;PF02518)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold68493_1663-5232' '(at5g54660 : 178.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative HSP21.7, Description = 21.7 kDa class VI heat shock protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold71033_4701-7754' '(at5g51440 : 160.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: mitochondrion-localized small heat shock protein 23.6 (TAIR:AT4G25200.1); Has 3995 Blast hits to 3995 proteins in 1037 species: Archae - 138; Bacteria - 2214; Metazoa - 5; Fungi - 114; Plants - 1208; Viruses - 0; Other Eukaryotes - 316 (source: NCBI BLink). & (p46254|hs22m_pea : 149.0) Heat shock 22 kDa protein, mitochondrial precursor - Pisum sativum (Garden pea) & (gnl|cdd|84439 : 85.3) no description available & (gnl|cdd|35929 : 84.4) no description available & (reliability: 320.0) & (original description: Putative HSP23, Description = Small heat shock protein, chloroplastic, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold71649_1-8221' '(at5g15450 : 1484.0) Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype.; casein lytic proteinase B3 (CLPB3); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: chloroplast organization, response to heat; LOCATED IN: plastid stroma, chloroplast, chloroplast stroma; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpB (InterPro:IPR017730), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: casein lytic proteinase B4 (TAIR:AT2G25140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30888 : 952.0) no description available & (gnl|cdd|36269 : 850.0) no description available & (q6f2y7|hs101_orysa : 761.0) Heat shock protein 101 - Oryza sativa (Rice) & (reliability: 2968.0) & (original description: Putative clpB, Description = Chaperone protein ClpB, PFAM = PF02861;PF02861;PF10431;PF00004;PF07724)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold73634_3969-8182' '(at2g47440 : 618.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G62570.1); Has 357 Blast hits to 345 proteins in 102 species: Archae - 0; Bacteria - 6; Metazoa - 79; Fungi - 59; Plants - 180; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 1236.0) & (original description: Putative At3g62570, Description = AT3g62570/T12C14_270, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold77000_1168-3638' '(p05477|hsp21_soybn : 199.0) 17.9 kDa class II heat shock protein - Glycine max (Soybean) & (at5g12020 : 148.0) 17.6 kDa class II heat shock protein (HSP17.6II); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84439 : 121.0) no description available & (gnl|cdd|35929 : 117.0) no description available & (reliability: 296.0) & (original description: Putative hsp2, Description = Low molecular weight heat shock protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold79553_560-3030' '(p05477|hsp21_soybn : 206.0) 17.9 kDa class II heat shock protein - Glycine max (Soybean) & (at5g12020 : 150.0) 17.6 kDa class II heat shock protein (HSP17.6II); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84439 : 120.0) no description available & (gnl|cdd|35929 : 118.0) no description available & (reliability: 300.0) & (original description: Putative hsp2, Description = Low molecular weight heat shock protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold83091_1-6295' '(at5g22080 : 269.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT1G65280.1). & (gnl|cdd|36365 : 95.2) no description available & (reliability: 538.0) & (original description: Putative dnj27, Description = Molecular chaperone, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold87468_1-2069' '(p04793|hsp13_soybn : 157.0) 17.5 kDa class I heat shock protein (HSP 17.5-M) - Glycine max (Soybean) & (at5g59720 : 151.0) encodes a low molecular weight heat shock protein that contains the heat shock element in the promoter region. Expression is induced in response to heat shock.; heat shock protein 18.2 (HSP18.2); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35929 : 112.0) no description available & (gnl|cdd|84439 : 104.0) no description available & (reliability: 302.0) & (original description: Putative hsp17, Description = 17.5 kd heat shock family protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold91314_5-4359' '(at3g14200 : 149.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G72416.2); Has 21914 Blast hits to 21906 proteins in 3169 species: Archae - 155; Bacteria - 8965; Metazoa - 3686; Fungi - 1997; Plants - 2132; Viruses - 13; Other Eukaryotes - 4966 (source: NCBI BLink). & (gnl|cdd|30832 : 90.3) no description available & (reliability: 298.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold92069_1-5088' '(q08276|hsp7m_soltu : 1097.0) Heat shock 70 kDa protein, mitochondrial precursor - Solanum tuberosum (Potato) & (at5g09590 : 1052.0) heat shock protein 70 (Hsc70-5); nuclear; mitochondrial HSO70 2 (MTHSC70-2); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cadmium ion, response to salt stress, response to virus, response to heat; LOCATED IN: mitochondrion, cell wall, plasma membrane, chloroplast, mitochondrial matrix; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Chaperone DnaK (InterPro:IPR012725), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: mitochondrial heat shock protein 70-1 (TAIR:AT4G37910.1); Has 35090 Blast hits to 34955 proteins in 4871 species: Archae - 160; Bacteria - 17405; Metazoa - 3531; Fungi - 1665; Plants - 1246; Viruses - 305; Other Eukaryotes - 10778 (source: NCBI BLink). & (gnl|cdd|80608 : 980.0) no description available & (gnl|cdd|35325 : 944.0) no description available & (reliability: 2104.0) & (original description: Putative dnaK, Description = Chaperone protein DnaK, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold101235_159-3255' '(at4g11660 : 245.0) member of Heat Stress Transcription Factor (Hsf) family; AT-HSFB2B; FUNCTIONS IN: transcription repressor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 32476 Blast hits to 10764 proteins in 847 species: Archae - 36; Bacteria - 10454; Metazoa - 9035; Fungi - 1651; Plants - 6330; Viruses - 666; Other Eukaryotes - 4304 (source: NCBI BLink). & (gnl|cdd|35846 : 160.0) no description available & (gnl|cdd|84779 : 147.0) no description available & (reliability: 490.0) & (original description: Putative HSFB2B, Description = Heat stress transcription factor B-2b, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.3scaffold114376_1-2496' '(q01545|hsp22_iponi : 132.0) 18.8 kDa class II heat shock protein - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (at5g12020 : 122.0) 17.6 kDa class II heat shock protein (HSP17.6II); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84439 : 103.0) no description available & (gnl|cdd|35929 : 94.0) no description available & (reliability: 244.0) & (original description: Putative hsp2, Description = 17.7 kDa heat shock protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold115_804293-809033' '(at4g11660 : 115.0) member of Heat Stress Transcription Factor (Hsf) family; AT-HSFB2B; FUNCTIONS IN: transcription repressor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 32476 Blast hits to 10764 proteins in 847 species: Archae - 36; Bacteria - 10454; Metazoa - 9035; Fungi - 1651; Plants - 6330; Viruses - 666; Other Eukaryotes - 4304 (source: NCBI BLink). & (gnl|cdd|35846 : 114.0) no description available & (gnl|cdd|84779 : 113.0) no description available & (reliability: 230.0) & (original description: Putative HSF, Description = Heat shock transcription factor, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold296_736206-865470' '(at5g22080 : 219.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT1G65280.1). & (reliability: 438.0) & (original description: Putative dnj27, Description = BnaA10g14230D protein, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold456_467547-471019' '(at5g02500 : 725.0) encodes a member of heat shock protein 70 family.; heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cold, response to virus, response to heat; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p09189|hsp7c_pethy : 718.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (gnl|cdd|84440 : 610.0) no description available & (gnl|cdd|35323 : 607.0) no description available & (reliability: 1450.0) & (original description: Putative hspB, Description = Heat shock protein 70, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold505_622449-624898' '(at4g10250 : 123.0) Columbia endomembrane-localized small heat shock protein; ATHSP22.0; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to heat; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G07400.1); Has 7552 Blast hits to 7552 proteins in 1747 species: Archae - 200; Bacteria - 4479; Metazoa - 74; Fungi - 263; Plants - 1560; Viruses - 4; Other Eukaryotes - 972 (source: NCBI BLink). & (p30236|hsp41_soybn : 123.0) 22.0 kDa class IV heat shock protein precursor - Glycine max (Soybean) & (gnl|cdd|84439 : 86.0) no description available & (gnl|cdd|35929 : 83.3) no description available & (reliability: 246.0) & (original description: Putative hsp17, Description = 22.0 kDa class IV heat shock protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold831_488742-512036' '(at1g79920 : 1256.0) Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 91 (TAIR:AT1G79930.1); Has 26399 Blast hits to 25673 proteins in 4386 species: Archae - 152; Bacteria - 11778; Metazoa - 3903; Fungi - 1562; Plants - 1156; Viruses - 127; Other Eukaryotes - 7721 (source: NCBI BLink). & (gnl|cdd|35326 : 858.0) no description available & (gnl|cdd|84440 : 434.0) no description available & (p09189|hsp7c_pethy : 270.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 2512.0) & (original description: Putative hspa4, Description = Heat shock protein 70 family, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold1176_277966-364765' '(at4g10130 : 82.8) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Zinc finger, DPH-type (InterPro:IPR007872); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT3G13310.1); Has 18672 Blast hits to 18671 proteins in 2948 species: Archae - 158; Bacteria - 7534; Metazoa - 3304; Fungi - 1856; Plants - 1763; Viruses - 10; Other Eukaryotes - 4047 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative , Description = DNAJ heat shock N-terminal domain-containing protein isoform 1, PFAM = PF05207)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold1217_271405-276281' '(at5g56030 : 1050.0) A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c.; heat shock protein 81-2 (HSP81-2); CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 81.4 (TAIR:AT5G56000.1). & (p33126|hsp81_orysa : 1048.0) Heat shock protein 81-1 (HSP81-1) (Heat shock protein 82) - Oryza sativa (Rice) & (gnl|cdd|35242 : 831.0) no description available & (gnl|cdd|84591 : 763.0) no description available & (reliability: 2100.0) & (original description: Putative hspD, Description = Heat shock protein 90, PFAM = PF00183;PF02518)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold1958_215432-226244' '(at3g13310 : 101.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT2G17880.1); Has 19059 Blast hits to 19056 proteins in 3143 species: Archae - 142; Bacteria - 8678; Metazoa - 3049; Fungi - 1540; Plants - 1805; Viruses - 5; Other Eukaryotes - 3840 (source: NCBI BLink). & (gnl|cdd|30832 : 90.3) no description available & (reliability: 202.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold2156_124123-129121' '(at5g59610 : 181.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT4G39960.1); Has 23649 Blast hits to 23644 proteins in 3244 species: Archae - 193; Bacteria - 9673; Metazoa - 3994; Fungi - 2050; Plants - 2390; Viruses - 23; Other Eukaryotes - 5326 (source: NCBI BLink). & (gnl|cdd|30832 : 99.1) no description available & (gnl|cdd|35934 : 83.6) no description available & (reliability: 362.0) & (original description: Putative DJC73, Description = DnaJ, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold2521_194910-198761' '(at5g15450 : 579.0) Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype.; casein lytic proteinase B3 (CLPB3); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: chloroplast organization, response to heat; LOCATED IN: plastid stroma, chloroplast, chloroplast stroma; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpB (InterPro:IPR017730), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: casein lytic proteinase B4 (TAIR:AT2G25140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|83547 : 407.0) no description available & (gnl|cdd|36269 : 351.0) no description available & (q6f2y7|hs101_orysa : 323.0) Heat shock protein 101 - Oryza sativa (Rice) & (reliability: 1158.0) & (original description: Putative clpB, Description = Chaperone protein ClpB, PFAM = PF07724)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold2632_33722-38246' '(q04960|dnjh_cucsa : 549.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (at3g44110 : 513.0) homologous to the co-chaperon DNAJ protein from E coli; DNAJ homologue 3 (ATJ3); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, response to salt stress, regulation of ATPase activity; LOCATED IN: nucleolus, cell wall, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ homologue 2 (TAIR:AT5G22060.1); Has 26521 Blast hits to 26345 proteins in 3465 species: Archae - 213; Bacteria - 10015; Metazoa - 4280; Fungi - 2432; Plants - 2547; Viruses - 88; Other Eukaryotes - 6946 (source: NCBI BLink). & (gnl|cdd|35931 : 393.0) no description available & (gnl|cdd|30832 : 309.0) no description available & (reliability: 1026.0) & (original description: Putative DNAJ1, Description = DnaJ protein homolog, PFAM = PF01556;PF00684;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold3886_166932-170008' '(at2g01710 : 142.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G64360.1); Has 8537 Blast hits to 8496 proteins in 1861 species: Archae - 67; Bacteria - 3520; Metazoa - 1920; Fungi - 549; Plants - 1113; Viruses - 8; Other Eukaryotes - 1360 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative , Description = , PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold4299_105930-122863' '(at2g35720 : 518.0) Encodes OWL1, a J-domain protein involved in perception of very low light fluences.; ORIENTATION UNDER VERY LOW FLUENCES OF LIGHT 1 (OWL1); FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding, vegetative to reproductive phase transition of meristem, response to very low light intensity stimulus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT3G47940.1); Has 23021 Blast hits to 22960 proteins in 3212 species: Archae - 168; Bacteria - 9682; Metazoa - 3958; Fungi - 2136; Plants - 2202; Viruses - 13; Other Eukaryotes - 4862 (source: NCBI BLink). & (gnl|cdd|35937 : 398.0) no description available & (gnl|cdd|30832 : 94.9) no description available & (reliability: 1036.0) & (original description: Putative dnaJ, Description = Chaperone protein dnaJ 13, PFAM = PF11875;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold4693_55721-72610' '(at1g11660 : 533.0) heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT1G79920.1); Has 25020 Blast hits to 24886 proteins in 4391 species: Archae - 151; Bacteria - 11311; Metazoa - 3542; Fungi - 1480; Plants - 1013; Viruses - 97; Other Eukaryotes - 7426 (source: NCBI BLink). & (gnl|cdd|35326 : 367.0) no description available & (gnl|cdd|84440 : 162.0) no description available & (p09189|hsp7c_pethy : 114.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 1066.0) & (original description: Putative Os06g0679800, Description = Os06g0679800 protein, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold5186_84203-90420' '(at2g46240 : 110.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Expression of BAG6 in leaves was strongly induced by heat stress. Knockout mutants exhibited enhanced susceptibility to fungal pathogen Botrytis cinerea. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 6 (BAG6); CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 5 (TAIR:AT1G12060.1); Has 21821 Blast hits to 15371 proteins in 1199 species: Archae - 184; Bacteria - 2603; Metazoa - 10110; Fungi - 2300; Plants - 994; Viruses - 95; Other Eukaryotes - 5535 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative PGSC0003DMG400000079, Description = , PFAM = PF02179;PF00612)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold5379_56687-73763' '(at1g28210 : 464.0) DnaJ homolog AtJ1 (atj); ATJ1; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, zinc ion binding, nucleic acid binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Zinc finger, CCHC-type (InterPro:IPR001878), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: gametophytic factor 2 (TAIR:AT5G48030.1); Has 28171 Blast hits to 27206 proteins in 3463 species: Archae - 195; Bacteria - 10792; Metazoa - 4387; Fungi - 2267; Plants - 2533; Viruses - 17; Other Eukaryotes - 7980 (source: NCBI BLink). & (gnl|cdd|30832 : 365.0) no description available & (gnl|cdd|35934 : 211.0) no description available & (q04960|dnjh_cucsa : 135.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 928.0) & (original description: Putative ATJ1, Description = Chaperone protein dnaJ 1, mitochondrial, PFAM = PF01556;PF00226;PF00684)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold5379_58884-69672' '(at1g28210 : 365.0) DnaJ homolog AtJ1 (atj); ATJ1; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, zinc ion binding, nucleic acid binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Zinc finger, CCHC-type (InterPro:IPR001878), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: gametophytic factor 2 (TAIR:AT5G48030.1); Has 28171 Blast hits to 27206 proteins in 3463 species: Archae - 195; Bacteria - 10792; Metazoa - 4387; Fungi - 2267; Plants - 2533; Viruses - 17; Other Eukaryotes - 7980 (source: NCBI BLink). & (gnl|cdd|30832 : 305.0) no description available & (gnl|cdd|35934 : 209.0) no description available & (q04960|dnjh_cucsa : 117.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 730.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF00226;PF01556;PF00684)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold5762_12099-30976' '(at3g62190 : 85.1) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); Has 805 Blast hits to 805 proteins in 198 species: Archae - 8; Bacteria - 249; Metazoa - 41; Fungi - 73; Plants - 71; Viruses - 0; Other Eukaryotes - 363 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative BnaA09g39740D, Description = BnaA09g39740D protein, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold7064_2031-5920' '(at2g26150 : 241.0) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.; heat shock transcription factor A2 (HSFA2); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35846 : 169.0) no description available & (gnl|cdd|84779 : 152.0) no description available & (reliability: 482.0) & (original description: Putative hsfa9, Description = HSFA9, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold8027_43014-48505' '(q03684|bip4_tobac : 1165.0) Luminal-binding protein 4 precursor (BiP 4) (78 kDa glucose-regulated protein homolog 4) (GRP 78-4) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35323 : 1078.0) no description available & (at5g28540 : 1077.0) Encodes the luminal binding protein BiP, an ER-localized member of the HSP70 family. BiP is composed of an N-terminal ATP binding domain and a C-terminal domain that binds to hydrophobic patches on improperly/incompletely folded proteins in an ATP-dependent manner. Involved in polar nuclei fusion during proliferation of endosperm nuclei.; BIP1; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, ER-associated protein catabolic process, response to heat, polar nucleus fusion; LOCATED IN: cell wall, plasma membrane, chloroplast, vacuole, endoplasmic reticulum lumen; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G42020.1); Has 36391 Blast hits to 35786 proteins in 4820 species: Archae - 162; Bacteria - 17493; Metazoa - 3988; Fungi - 1814; Plants - 1283; Viruses - 341; Other Eukaryotes - 11310 (source: NCBI BLink). & (gnl|cdd|84440 : 857.0) no description available & (reliability: 2154.0) & (original description: Putative bip, Description = 78 kDa glucose-regulated protein, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'nbv0.5scaffold8318_1687-5563' '(p09189|hsp7c_pethy : 566.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at3g12580 : 565.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (gnl|cdd|84440 : 520.0) no description available & (gnl|cdd|35323 : 492.0) no description available & (reliability: 1130.0) & (original description: Putative hspB, Description = Heat shock protein 70, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00001000ctg003_18651-25587' '(at3g08910 : 439.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT5G01390.1); Has 28100 Blast hits to 27785 proteins in 3479 species: Archae - 185; Bacteria - 10426; Metazoa - 4606; Fungi - 2650; Plants - 2881; Viruses - 19; Other Eukaryotes - 7333 (source: NCBI BLink). & (gnl|cdd|30832 : 212.0) no description available & (gnl|cdd|35933 : 209.0) no description available & (q04960|dnjh_cucsa : 95.1) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 878.0) & (original description: Putative hsp40, Description = Heat shock protein 40, PFAM = PF00226;PF01556)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00001628ctg006_249-3055' '(at2g27140 : 82.4) HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to heat; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G20970.1); Has 712 Blast hits to 708 proteins in 96 species: Archae - 0; Bacteria - 37; Metazoa - 7; Fungi - 2; Plants - 649; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative PGSC0003DMG400008714, Description = Hsp20/alpha crystallin family protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00002407ctg004_1-2646' '(p09886|hs21c_pea : 132.0) Small heat shock protein, chloroplast precursor - Pisum sativum (Garden pea) & (at4g27670 : 130.0) chloroplast located small heat shock protein.; heat shock protein 21 (HSP21); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G51440.1); Has 6158 Blast hits to 6158 proteins in 1414 species: Archae - 225; Bacteria - 3528; Metazoa - 23; Fungi - 170; Plants - 1466; Viruses - 0; Other Eukaryotes - 746 (source: NCBI BLink). & (gnl|cdd|29382 : 84.1) no description available & (reliability: 260.0) & (original description: Putative cpsHSP, Description = Chloroplast small heat shock protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00003675ctg002_9845-13332' '(gnl|cdd|84779 : 121.0) no description available & (gnl|cdd|35846 : 113.0) no description available & (at5g03720 : 109.0) Member of Heat Stress Transcription Factor (Hsf) family. Expression is regulated by DREB2A and in turn HSFA3 regulates the expression of hsps Hsp18.1-CI and Hsp26.5-MII35S. Involved in establishing thermotolerence.; heat shock transcription factor A3 (HSFA3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to heat, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative PGSC0003DMG400041361, Description = Putative ovule protein, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00005792ctg020_1-8577' '(at1g75310 : 189.0) auxin-like 1 protein (AUL1); FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G36520.1); Has 43064 Blast hits to 29150 proteins in 1965 species: Archae - 316; Bacteria - 7312; Metazoa - 16664; Fungi - 4671; Plants - 2417; Viruses - 306; Other Eukaryotes - 11378 (source: NCBI BLink). & (gnl|cdd|35652 : 162.0) no description available & (reliability: 378.0) & (original description: Putative AUL1, Description = Auxilin-related protein 2, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00006881ctg014_1-4231' '(at1g79030 : 470.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G16680.1); Has 17828 Blast hits to 17824 proteins in 3062 species: Archae - 123; Bacteria - 7609; Metazoa - 2994; Fungi - 1488; Plants - 1684; Viruses - 8; Other Eukaryotes - 3922 (source: NCBI BLink). & (gnl|cdd|35939 : 209.0) no description available & (gnl|cdd|84624 : 80.6) no description available & (reliability: 940.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF14901;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00006964ctg005_10905-19721' '(at3g47940 : 385.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT1G10350.1); Has 27840 Blast hits to 26488 proteins in 3397 species: Archae - 203; Bacteria - 10747; Metazoa - 4580; Fungi - 2597; Plants - 2794; Viruses - 15; Other Eukaryotes - 6904 (source: NCBI BLink). & (gnl|cdd|30832 : 196.0) no description available & (gnl|cdd|35933 : 192.0) no description available & (q04960|dnjh_cucsa : 95.9) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 770.0) & (original description: Putative hsp40, Description = DNAJ heat shock family protein, PFAM = PF00226;PF01556)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00007018ctg001_6544-8959' '(p05477|hsp21_soybn : 206.0) 17.9 kDa class II heat shock protein - Glycine max (Soybean) & (at5g12020 : 145.0) 17.6 kDa class II heat shock protein (HSP17.6II); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84439 : 120.0) no description available & (gnl|cdd|35929 : 119.0) no description available & (reliability: 290.0) & (original description: Putative hsp2, Description = Low molecular weight heat shock protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00007315ctg000_580-5027' '(at2g35795 : 167.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT3G09700.1); Has 912 Blast hits to 912 proteins in 301 species: Archae - 0; Bacteria - 183; Metazoa - 207; Fungi - 194; Plants - 95; Viruses - 5; Other Eukaryotes - 228 (source: NCBI BLink). & (gnl|cdd|35942 : 143.0) no description available & (reliability: 334.0) & (original description: Putative pam18, Description = Mitochondrial import inner membrane translocase subunit TIM14, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00007358ctg001_5000-9566' '(at2g05230 : 582.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G05250.1); Has 13630 Blast hits to 13432 proteins in 2557 species: Archae - 75; Bacteria - 5761; Metazoa - 2469; Fungi - 964; Plants - 1524; Viruses - 9; Other Eukaryotes - 2828 (source: NCBI BLink). & (gnl|cdd|84624 : 81.0) no description available & (reliability: 1164.0) & (original description: Putative PGSC0003DMG400006125, Description = DNAJ heat shock N-terminal domain-containing protein, PFAM = PF11926;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00007702ctg016_43134-50853' '(at2g29970 : 634.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G07200.2); Has 10913 Blast hits to 10488 proteins in 2533 species: Archae - 15; Bacteria - 9122; Metazoa - 6; Fungi - 149; Plants - 525; Viruses - 0; Other Eukaryotes - 1096 (source: NCBI BLink). & (gnl|cdd|36269 : 474.0) no description available & (reliability: 1268.0) & (original description: Putative fad3a, Description = Double Clp-N motif P-loop nucleoside triphosphate hydrolase superfamily protein, PFAM = PF07724)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00008462ctg002_5739-18745' '(at5g12430 : 546.0) Heat shock protein DnaJ with tetratricopeptide repeat; FUNCTIONS IN: heat shock protein binding, binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Heat shock protein DnaJ with tetratricopeptide repeat (TAIR:AT2G41520.1); Has 27844 Blast hits to 24585 proteins in 3132 species: Archae - 222; Bacteria - 9738; Metazoa - 5941; Fungi - 3019; Plants - 3250; Viruses - 11; Other Eukaryotes - 5663 (source: NCBI BLink). & (gnl|cdd|35770 : 138.0) no description available & (reliability: 1080.0) & (original description: Putative BnaA10g30100D, Description = BnaA10g30100D protein, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00010244ctg009_15709-18782' '(at1g54850 : 80.9) HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G54840.1); Has 80 Blast hits to 80 proteins in 15 species: Archae - 0; Bacteria - 9; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00010261ctg001_1454-5468' '(at2g20560 : 362.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT4G28480.1); Has 27936 Blast hits to 27733 proteins in 3449 species: Archae - 187; Bacteria - 10270; Metazoa - 4781; Fungi - 2609; Plants - 2869; Viruses - 17; Other Eukaryotes - 7203 (source: NCBI BLink). & (gnl|cdd|30832 : 190.0) no description available & (gnl|cdd|35931 : 181.0) no description available & (q04960|dnjh_cucsa : 95.5) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 724.0) & (original description: Putative v1g188073, Description = Predicted protein, PFAM = PF01556;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00010488ctg011_187-6093' '(at5g42480 : 698.0) Shows homology to the cyanobacterial cell division protein Ftn2, mutant only has two mesophyll cell chloroplasts. Protein was localized to a ring at the center of the chloroplasts. Probably involved in functions in the assembly and/or stabilization of the plastid-dividing FtsZ ring, inhibiting FtsZ filament formation in the chloroplast.; ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6 (ARC6); FUNCTIONS IN: protein binding; INVOLVED IN: protein folding, chloroplast fission, chloroplast organization; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: paralog of ARC6 (TAIR:AT3G19180.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1396.0) & (original description: Putative ARC6, Description = Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00010955ctg009_3930-7803' '(at1g56300 : 141.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding, response to cyclopentenone; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G71000.1); Has 23532 Blast hits to 23527 proteins in 3290 species: Archae - 175; Bacteria - 9754; Metazoa - 3953; Fungi - 2136; Plants - 2298; Viruses - 10; Other Eukaryotes - 5206 (source: NCBI BLink). & (gnl|cdd|30832 : 93.8) no description available & (reliability: 282.0) & (original description: Putative dnaJ, Description = DnaJ homolog subfamily B member 6, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00012690ctg001_8456-12680' '(at3g05345 : 243.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G23240.1); Has 10844 Blast hits to 10844 proteins in 2367 species: Archae - 96; Bacteria - 5912; Metazoa - 1330; Fungi - 441; Plants - 721; Viruses - 3; Other Eukaryotes - 2341 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative At3g05345, Description = DnaJ domain-containing protein, PFAM = PF13459)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00015133ctg004_1-2176' '(at3g22530 : 108.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14830.1); Has 77 Blast hits to 77 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative BnaA05g17110D, Description = Putative heat shock 22 kDa protein-like, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00015581ctg010_2024-7365' '(at1g28210 : 273.0) DnaJ homolog AtJ1 (atj); ATJ1; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, zinc ion binding, nucleic acid binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Zinc finger, CCHC-type (InterPro:IPR001878), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: gametophytic factor 2 (TAIR:AT5G48030.1); Has 28171 Blast hits to 27206 proteins in 3463 species: Archae - 195; Bacteria - 10792; Metazoa - 4387; Fungi - 2267; Plants - 2533; Viruses - 17; Other Eukaryotes - 7980 (source: NCBI BLink). & (gnl|cdd|30832 : 215.0) no description available & (gnl|cdd|35934 : 166.0) no description available & (q04960|dnjh_cucsa : 97.1) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 546.0) & (original description: Putative dnaJ, Description = Chaperone protein dnaJ 1, mitochondrial, PFAM = PF00684;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00015858ctg008_1-1903' '(at5g54660 : 116.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative At5g54660, Description = 21.7 kDa class VI heat shock protein, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00015967ctg021_9316-11596' '(at5g15450 : 154.0) Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype.; casein lytic proteinase B3 (CLPB3); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: chloroplast organization, response to heat; LOCATED IN: plastid stroma, chloroplast, chloroplast stroma; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpB (InterPro:IPR017730), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: casein lytic proteinase B4 (TAIR:AT2G25140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative clpB, Description = Chaperone protein ClpB, PFAM = PF02861)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00016540ctg007_10057-18493' '(at1g75310 : 207.0) auxin-like 1 protein (AUL1); FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G36520.1); Has 43064 Blast hits to 29150 proteins in 1965 species: Archae - 316; Bacteria - 7312; Metazoa - 16664; Fungi - 4671; Plants - 2417; Viruses - 306; Other Eukaryotes - 11378 (source: NCBI BLink). & (gnl|cdd|35652 : 164.0) no description available & (reliability: 414.0) & (original description: Putative AUL1, Description = Auxilin-related protein 2, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00016695ctg002_1-4578' '(q04960|dnjh_cucsa : 553.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (at3g44110 : 511.0) homologous to the co-chaperon DNAJ protein from E coli; DNAJ homologue 3 (ATJ3); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, response to salt stress, regulation of ATPase activity; LOCATED IN: nucleolus, cell wall, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ homologue 2 (TAIR:AT5G22060.1); Has 26521 Blast hits to 26345 proteins in 3465 species: Archae - 213; Bacteria - 10015; Metazoa - 4280; Fungi - 2432; Plants - 2547; Viruses - 88; Other Eukaryotes - 6946 (source: NCBI BLink). & (gnl|cdd|35931 : 392.0) no description available & (gnl|cdd|30832 : 309.0) no description available & (reliability: 1022.0) & (original description: Putative B38, Description = DnaJ homolog, PFAM = PF01556;PF00226;PF00684)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00017074ctg003_5864-10848' '(at2g47440 : 627.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G62570.1); Has 357 Blast hits to 345 proteins in 102 species: Archae - 0; Bacteria - 6; Metazoa - 79; Fungi - 59; Plants - 180; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 1254.0) & (original description: Putative At3g62570, Description = AT3g62570/T12C14_270, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00017415ctg003_27114-33497' '(at1g74310 : 1370.0) Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature.; heat shock protein 101 (HSP101); FUNCTIONS IN: protein binding, ATPase activity, ATP binding; INVOLVED IN: response to high light intensity, response to hydrogen peroxide, response to heat, protein unfolding; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: casein lytic proteinase B2 (TAIR:AT4G14670.1); Has 27671 Blast hits to 24472 proteins in 3146 species: Archae - 360; Bacteria - 17866; Metazoa - 1124; Fungi - 430; Plants - 707; Viruses - 13; Other Eukaryotes - 7171 (source: NCBI BLink). & (q6f2y7|hs101_orysa : 1325.0) Heat shock protein 101 - Oryza sativa (Rice) & (gnl|cdd|30888 : 883.0) no description available & (gnl|cdd|36269 : 815.0) no description available & (reliability: 2740.0) & (original description: Putative CLPB1, Description = Chaperone protein ClpB1, PFAM = PF00004;PF10431;PF07724;PF02861;PF02861)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00018815ctg000_3839-9164' '(at1g59725 : 377.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT1G10350.1); Has 28155 Blast hits to 27844 proteins in 3478 species: Archae - 176; Bacteria - 10528; Metazoa - 4629; Fungi - 2607; Plants - 2835; Viruses - 20; Other Eukaryotes - 7360 (source: NCBI BLink). & (gnl|cdd|35931 : 175.0) no description available & (gnl|cdd|30832 : 138.0) no description available & (q04960|dnjh_cucsa : 92.8) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 754.0) & (original description: Putative hsp40, Description = DNAJ heat shock family protein, PFAM = PF01556;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00020230ctg004_9010-12197' '(at2g40130 : 358.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-2 (InterPro:IPR013093); BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G29970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36269 : 268.0) no description available & (reliability: 716.0) & (original description: Putative fad3a, Description = Double Clp-N motif P-loop nucleoside triphosphate hydrolase superfamily protein, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00022307ctg004_44200-49643' '(p09189|hsp7c_pethy : 784.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at5g02500 : 775.0) encodes a member of heat shock protein 70 family.; heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cold, response to virus, response to heat; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84440 : 684.0) no description available & (gnl|cdd|35323 : 660.0) no description available & (reliability: 1550.0) & (original description: Putative hspB, Description = Heat shock protein 70, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00022480ctg004_47-5114' '(at5g18140 : 185.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT2G22360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35934 : 98.6) no description available & (gnl|cdd|30832 : 94.9) no description available & (reliability: 370.0) & (original description: Putative cbpA, Description = Chaperone protein DnaJ, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00022510ctg002_64-8932' '(at5g06410 : 209.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding, chaperone binding; INVOLVED IN: protein folding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock cognate protein B, C-terminal oligomerisation (InterPro:IPR009073), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Co-chaperone Hsc20 (InterPro:IPR004640); Has 1884 Blast hits to 1884 proteins in 890 species: Archae - 0; Bacteria - 1464; Metazoa - 116; Fungi - 101; Plants - 38; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (gnl|cdd|38402 : 136.0) no description available & (gnl|cdd|81420 : 89.1) no description available & (reliability: 418.0) & (original description: Putative At5g06410, Description = Molecular chaperone HscB, PFAM = PF07743)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00024619ctg004_12400-15945' '(gnl|cdd|84779 : 120.0) no description available & (gnl|cdd|35846 : 114.0) no description available & (at5g03720 : 108.0) Member of Heat Stress Transcription Factor (Hsf) family. Expression is regulated by DREB2A and in turn HSFA3 regulates the expression of hsps Hsp18.1-CI and Hsp26.5-MII35S. Involved in establishing thermotolerence.; heat shock transcription factor A3 (HSFA3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to heat, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative PGSC0003DMG400041361, Description = Putative ovule protein, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00024690ctg004_1-4323' '(at5g53150 : 453.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G05230.1); Has 19161 Blast hits to 18960 proteins in 3050 species: Archae - 127; Bacteria - 8115; Metazoa - 3268; Fungi - 1518; Plants - 2179; Viruses - 8; Other Eukaryotes - 3946 (source: NCBI BLink). & (reliability: 906.0) & (original description: Putative TCM_014652, Description = DNAJ heat shock N-terminal domain-containing protein, putative, PFAM = PF00226;PF11926)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00025616ctg002_1462-5558' '(at5g64360 : 153.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G09540.1); Has 2668 Blast hits to 2652 proteins in 821 species: Archae - 47; Bacteria - 1266; Metazoa - 509; Fungi - 114; Plants - 564; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative , Description = DNAJ heat shock N-terminal domain-containing family protein, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00031036ctg001_2794-8188' '(at5g27240 : 283.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT3G04980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 566.0) & (original description: Putative At3g04960, Description = AT5g37380/MNJ8_170, PFAM = PF11926;PF11926;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00033121ctg006_668-3991' '(at1g20870 : 192.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G54850.1); Has 109 Blast hits to 81 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative IDM2, Description = Alpha-crystallin domain of heat shock protein, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00035057ctg006_14823-17950' '(at2g01710 : 166.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G64360.1); Has 8537 Blast hits to 8496 proteins in 1861 species: Archae - 67; Bacteria - 3520; Metazoa - 1920; Fungi - 549; Plants - 1113; Viruses - 8; Other Eukaryotes - 1360 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative POPTR_0002s10560g, Description = DNAJ heat shock N-terminal domain-containing family protein, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00037397ctg002_7189-12314' '(at5g16650 : 139.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT2G33735.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30832 : 100.0) no description available & (gnl|cdd|35932 : 82.7) no description available & (reliability: 278.0) & (original description: Putative cbpA, Description = Chaperone protein DnaJ, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00037630ctg007_651-3598' '(at1g52560 : 98.2) HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to high light intensity, response to hydrogen peroxide, response to heat; LOCATED IN: mitochondrion; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 21 (TAIR:AT4G27670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00039188ctg013_4765-8524' '(at2g26150 : 246.0) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.; heat shock transcription factor A2 (HSFA2); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35846 : 170.0) no description available & (gnl|cdd|84779 : 151.0) no description available & (reliability: 492.0) & (original description: Putative hsfa9, Description = HSFA9, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00039676ctg015_12832-17341' '(q03684|bip4_tobac : 1070.0) Luminal-binding protein 4 precursor (BiP 4) (78 kDa glucose-regulated protein homolog 4) (GRP 78-4) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35323 : 1068.0) no description available & (at5g28540 : 1050.0) Encodes the luminal binding protein BiP, an ER-localized member of the HSP70 family. BiP is composed of an N-terminal ATP binding domain and a C-terminal domain that binds to hydrophobic patches on improperly/incompletely folded proteins in an ATP-dependent manner. Involved in polar nuclei fusion during proliferation of endosperm nuclei.; BIP1; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, ER-associated protein catabolic process, response to heat, polar nucleus fusion; LOCATED IN: cell wall, plasma membrane, chloroplast, vacuole, endoplasmic reticulum lumen; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G42020.1); Has 36391 Blast hits to 35786 proteins in 4820 species: Archae - 162; Bacteria - 17493; Metazoa - 3988; Fungi - 1814; Plants - 1283; Viruses - 341; Other Eukaryotes - 11310 (source: NCBI BLink). & (gnl|cdd|84440 : 853.0) no description available & (reliability: 2100.0) & (original description: Putative MED37F, Description = Mediator of RNA polymerase II transcription subunit 37f, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00044174ctg004_4054-8412' '(at2g47440 : 641.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G62570.1); Has 357 Blast hits to 345 proteins in 102 species: Archae - 0; Bacteria - 6; Metazoa - 79; Fungi - 59; Plants - 180; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 1282.0) & (original description: Putative At3g62570, Description = AT3g62570/T12C14_270, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00044823ctg003_3152-10131' '(at5g49910 : 996.0) Stromal heat shock protein involved in protein import into chloroplast.; chloroplast heat shock protein 70-2 (CPHSC70-2EAT SHOCK PROTEIN 70-2); FUNCTIONS IN: protein binding; INVOLVED IN: protein folding, response to cadmium ion, protein targeting to chloroplast, response to heat; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Chaperone DnaK (InterPro:IPR012725), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: chloroplast heat shock protein 70-1 (TAIR:AT4G24280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80608 : 990.0) no description available & (q02028|hsp7s_pea : 988.0) Stromal 70 kDa heat shock-related protein, chloroplast precursor - Pisum sativum (Garden pea) & (gnl|cdd|35325 : 822.0) no description available & (reliability: 1992.0) & (original description: Putative dnaK, Description = Chaperone protein DnaK, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00045937ctg003_12861-17169' '(at1g79920 : 337.0) Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 91 (TAIR:AT1G79930.1); Has 26399 Blast hits to 25673 proteins in 4386 species: Archae - 152; Bacteria - 11778; Metazoa - 3903; Fungi - 1562; Plants - 1156; Viruses - 127; Other Eukaryotes - 7721 (source: NCBI BLink). & (gnl|cdd|35326 : 282.0) no description available & (gnl|cdd|84440 : 207.0) no description available & (p09189|hsp7c_pethy : 146.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 674.0) & (original description: Putative pss1, Description = Heat shock 70 kDa protein 4, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00045937ctg003_14480-21067' '(at1g79920 : 1238.0) Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 91 (TAIR:AT1G79930.1); Has 26399 Blast hits to 25673 proteins in 4386 species: Archae - 152; Bacteria - 11778; Metazoa - 3903; Fungi - 1562; Plants - 1156; Viruses - 127; Other Eukaryotes - 7721 (source: NCBI BLink). & (gnl|cdd|35326 : 845.0) no description available & (gnl|cdd|84440 : 429.0) no description available & (p09189|hsp7c_pethy : 265.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 2476.0) & (original description: Putative hspa4, Description = Heat shock protein 70 family, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00050645ctg001_3571-7277' '(at4g02100 : 612.0) Heat shock protein DnaJ with tetratricopeptide repeat; FUNCTIONS IN: binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G47440.1); Has 318 Blast hits to 309 proteins in 95 species: Archae - 0; Bacteria - 4; Metazoa - 68; Fungi - 63; Plants - 160; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 1224.0) & (original description: Putative At3g62570, Description = AT3g62570/T12C14_270, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00059444ctg000_1-4540' '(at3g14200 : 146.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G72416.2); Has 21914 Blast hits to 21906 proteins in 3169 species: Archae - 155; Bacteria - 8965; Metazoa - 3686; Fungi - 1997; Plants - 2132; Viruses - 13; Other Eukaryotes - 4966 (source: NCBI BLink). & (gnl|cdd|30832 : 89.1) no description available & (reliability: 292.0) & (original description: Putative dnaJ, Description = Chaperone DnaJ-domain containing protein, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben044scf00062045ctg000_1-5235' '(at4g39150 : 332.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G21510.1). & (gnl|cdd|35910 : 142.0) no description available & (reliability: 664.0) & (original description: Putative Os01g0702450, Description = Os01g0702450 protein, PFAM = PF14308)' T '20.2.1' 'stress.abiotic.heat' 'niben101ctg05021_1-646' '(q01899|hsp7m_phavu : 311.0) Heat shock 70 kDa protein, mitochondrial precursor - Phaseolus vulgaris (Kidney bean) (French bean) & (at5g09590 : 306.0) heat shock protein 70 (Hsc70-5); nuclear; mitochondrial HSO70 2 (MTHSC70-2); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cadmium ion, response to salt stress, response to virus, response to heat; LOCATED IN: mitochondrion, cell wall, plasma membrane, chloroplast, mitochondrial matrix; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Chaperone DnaK (InterPro:IPR012725), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: mitochondrial heat shock protein 70-1 (TAIR:AT4G37910.1); Has 35090 Blast hits to 34955 proteins in 4871 species: Archae - 160; Bacteria - 17405; Metazoa - 3531; Fungi - 1665; Plants - 1246; Viruses - 305; Other Eukaryotes - 10778 (source: NCBI BLink). & (gnl|cdd|35325 : 305.0) no description available & (gnl|cdd|80608 : 271.0) no description available & (reliability: 612.0) & (original description: Putative HSPA9, Description = Stress-70 protein, mitochondrial, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101ctg15726_1-4008' '(gnl|cdd|35846 : 123.0) no description available & (at4g11660 : 122.0) member of Heat Stress Transcription Factor (Hsf) family; AT-HSFB2B; FUNCTIONS IN: transcription repressor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 32476 Blast hits to 10764 proteins in 847 species: Archae - 36; Bacteria - 10454; Metazoa - 9035; Fungi - 1651; Plants - 6330; Viruses - 666; Other Eukaryotes - 4304 (source: NCBI BLink). & (gnl|cdd|84779 : 119.0) no description available & (reliability: 244.0) & (original description: Putative HSF15, Description = HSF15, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00028_451164-453760' '(at3g22530 : 97.1) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14830.1); Has 77 Blast hits to 77 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative BnaA05g17110D, Description = Heat shock 22 kDa protein, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00073_465639-468954' '(at4g18880 : 307.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A4A (HSF A4A); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT5G45710.1); Has 2263 Blast hits to 2244 proteins in 239 species: Archae - 2; Bacteria - 4; Metazoa - 360; Fungi - 491; Plants - 856; Viruses - 0; Other Eukaryotes - 550 (source: NCBI BLink). & (gnl|cdd|35846 : 176.0) no description available & (gnl|cdd|84779 : 167.0) no description available & (reliability: 614.0) & (original description: Putative HSFA4A, Description = Heat stress transcription factor A-4a, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00117_343718-350055' '(q02028|hsp7s_pea : 1038.0) Stromal 70 kDa heat shock-related protein, chloroplast precursor - Pisum sativum (Garden pea) & (at4g24280 : 1010.0) Involved in protein import into chloroplasts during early developmental stages.; chloroplast heat shock protein 70-1 (cpHsc70-1); FUNCTIONS IN: protein binding, ATP binding; INVOLVED IN: protein folding, response to cadmium ion, protein targeting to chloroplast, response to cold; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Chaperone DnaK (InterPro:IPR012725), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: chloroplast heat shock protein 70-2 (TAIR:AT5G49910.1); Has 36155 Blast hits to 36031 proteins in 4857 species: Archae - 160; Bacteria - 17964; Metazoa - 3544; Fungi - 1694; Plants - 1235; Viruses - 354; Other Eukaryotes - 11204 (source: NCBI BLink). & (gnl|cdd|80608 : 983.0) no description available & (gnl|cdd|35325 : 830.0) no description available & (reliability: 2020.0) & (original description: Putative HSP70, Description = Stromal 70 kDa heat shock-related protein, chloroplastic, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00127_320332-473822' '(at1g79920 : 1236.0) Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 91 (TAIR:AT1G79930.1); Has 26399 Blast hits to 25673 proteins in 4386 species: Archae - 152; Bacteria - 11778; Metazoa - 3903; Fungi - 1562; Plants - 1156; Viruses - 127; Other Eukaryotes - 7721 (source: NCBI BLink). & (gnl|cdd|35326 : 846.0) no description available & (gnl|cdd|84440 : 431.0) no description available & (p09189|hsp7c_pethy : 270.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 2472.0) & (original description: Putative hspa4, Description = Heat shock protein 70 family, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00141_109862-113520' '(p27880|hsp12_medsa : 140.0) 18.2 kDa class I heat shock protein - Medicago sativa (Alfalfa) & (at1g07400 : 132.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G59860.1); Has 7238 Blast hits to 7237 proteins in 1623 species: Archae - 225; Bacteria - 4290; Metazoa - 129; Fungi - 318; Plants - 1626; Viruses - 0; Other Eukaryotes - 650 (source: NCBI BLink). & (gnl|cdd|84439 : 92.2) no description available & (gnl|cdd|35929 : 86.3) no description available & (reliability: 264.0) & (original description: Putative hsp17, Description = Low molecular weight heat shock protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00149_163218-170219' '(at3g08910 : 443.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT5G01390.1); Has 28100 Blast hits to 27785 proteins in 3479 species: Archae - 185; Bacteria - 10426; Metazoa - 4606; Fungi - 2650; Plants - 2881; Viruses - 19; Other Eukaryotes - 7333 (source: NCBI BLink). & (gnl|cdd|30832 : 214.0) no description available & (gnl|cdd|35933 : 211.0) no description available & (q04960|dnjh_cucsa : 96.7) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 886.0) & (original description: Putative hsp40, Description = Heat shock protein 40, PFAM = PF01556;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00152_336810-344444' '(at5g42480 : 813.0) Shows homology to the cyanobacterial cell division protein Ftn2, mutant only has two mesophyll cell chloroplasts. Protein was localized to a ring at the center of the chloroplasts. Probably involved in functions in the assembly and/or stabilization of the plastid-dividing FtsZ ring, inhibiting FtsZ filament formation in the chloroplast.; ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6 (ARC6); FUNCTIONS IN: protein binding; INVOLVED IN: protein folding, chloroplast fission, chloroplast organization; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: paralog of ARC6 (TAIR:AT3G19180.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1626.0) & (original description: Putative ARC6, Description = Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic, PFAM = PF13355)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00167_64166-66082' '(at3g22530 : 113.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14830.1); Has 77 Blast hits to 77 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative BnaA05g17110D, Description = Putative heat shock 22 kDa protein-like, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00176_513746-519734' '(at4g21320 : 426.0) Encodes heat-stress-associated 32-kD protein. Up-regulated by heat shock. Thermotolerance in a knockout mutant was compromised following a long recovery period (> 24 h) after acclimation heat shock treatment.; HEAT-STRESS-ASSOCIATED 32 (HSA32); FUNCTIONS IN: catalytic activity; INVOLVED IN: response to heat, heat acclimation; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), (2R)-phospho-3-sulpholactate synthase, ComA (InterPro:IPR003830), Peptidase S8, subtilisin-related (InterPro:IPR015500); Has 279 Blast hits to 279 proteins in 109 species: Archae - 46; Bacteria - 111; Metazoa - 0; Fungi - 36; Plants - 41; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|86069 : 235.0) no description available & (reliability: 852.0) & (original description: Putative HSA32, Description = Protein HEAT-STRESS-ASSOCIATED 32, PFAM = PF02679)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00219_172004-174567' '(at4g10130 : 160.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Zinc finger, DPH-type (InterPro:IPR007872); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT3G13310.1); Has 18672 Blast hits to 18671 proteins in 2948 species: Archae - 158; Bacteria - 7534; Metazoa - 3304; Fungi - 1856; Plants - 1763; Viruses - 10; Other Eukaryotes - 4047 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative Os09g0460000, Description = DNAJ heat shock N-terminal domain-containing protein-like, PFAM = PF00226;PF05207)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00276_170776-173903' '(at2g01710 : 166.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G64360.1); Has 8537 Blast hits to 8496 proteins in 1861 species: Archae - 67; Bacteria - 3520; Metazoa - 1920; Fungi - 549; Plants - 1113; Viruses - 8; Other Eukaryotes - 1360 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative POPTR_0002s10560g, Description = DNAJ heat shock N-terminal domain-containing family protein, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00288_930017-989738' '(at2g29970 : 620.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G07200.2); Has 10913 Blast hits to 10488 proteins in 2533 species: Archae - 15; Bacteria - 9122; Metazoa - 6; Fungi - 149; Plants - 525; Viruses - 0; Other Eukaryotes - 1096 (source: NCBI BLink). & (gnl|cdd|36269 : 461.0) no description available & (reliability: 1240.0) & (original description: Putative fad3a, Description = Double Clp-N motif P-loop nucleoside triphosphate hydrolase superfamily protein, PFAM = PF07724)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00294_214615-219607' '(at2g35795 : 167.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT3G09700.1); Has 912 Blast hits to 912 proteins in 301 species: Archae - 0; Bacteria - 183; Metazoa - 207; Fungi - 194; Plants - 95; Viruses - 5; Other Eukaryotes - 228 (source: NCBI BLink). & (gnl|cdd|35942 : 143.0) no description available & (reliability: 334.0) & (original description: Putative pam18, Description = Mitochondrial import inner membrane translocase subunit TIM14, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00305_610102-618363' '(at4g36520 : 214.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G12770.2); Has 187564 Blast hits to 104912 proteins in 3501 species: Archae - 1251; Bacteria - 31029; Metazoa - 79517; Fungi - 15919; Plants - 9547; Viruses - 688; Other Eukaryotes - 49613 (source: NCBI BLink). & (gnl|cdd|35652 : 162.0) no description available & (reliability: 386.0) & (original description: Putative AUL1, Description = Auxilin-related protein 2, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00317_765093-786301' '(at2g35720 : 652.0) Encodes OWL1, a J-domain protein involved in perception of very low light fluences.; ORIENTATION UNDER VERY LOW FLUENCES OF LIGHT 1 (OWL1); FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding, vegetative to reproductive phase transition of meristem, response to very low light intensity stimulus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT3G47940.1); Has 23021 Blast hits to 22960 proteins in 3212 species: Archae - 168; Bacteria - 9682; Metazoa - 3958; Fungi - 2136; Plants - 2202; Viruses - 13; Other Eukaryotes - 4862 (source: NCBI BLink). & (gnl|cdd|35937 : 524.0) no description available & (gnl|cdd|30832 : 94.9) no description available & (reliability: 1304.0) & (original description: Putative ATJ13, Description = Chaperone protein dnaJ 13, PFAM = PF00226;PF11875)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00317_929801-932854' '(at5g51440 : 160.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: mitochondrion-localized small heat shock protein 23.6 (TAIR:AT4G25200.1); Has 3995 Blast hits to 3995 proteins in 1037 species: Archae - 138; Bacteria - 2214; Metazoa - 5; Fungi - 114; Plants - 1208; Viruses - 0; Other Eukaryotes - 316 (source: NCBI BLink). & (p46254|hs22m_pea : 147.0) Heat shock 22 kDa protein, mitochondrial precursor - Pisum sativum (Garden pea) & (gnl|cdd|84439 : 85.3) no description available & (gnl|cdd|35929 : 84.4) no description available & (reliability: 320.0) & (original description: Putative HSP23, Description = Small heat shock protein, chloroplastic, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00370_346477-350212' '(at1g20870 : 192.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G54850.1); Has 109 Blast hits to 81 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative IDM2, Description = Alpha-crystallin domain-containing protein 22.3, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00370_356714-361711' '(at1g54850 : 173.0) HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G54840.1); Has 80 Blast hits to 80 proteins in 15 species: Archae - 0; Bacteria - 9; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative IDM2, Description = Alpha-crystallin domain of heat shock protein, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00414_499015-594269' '(gnl|cdd|84591 : 208.0) no description available & (gnl|cdd|35242 : 196.0) no description available & (at5g56030 : 178.0) A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c.; heat shock protein 81-2 (HSP81-2); CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 81.4 (TAIR:AT5G56000.1). & (p33126|hsp81_orysa : 176.0) Heat shock protein 81-1 (HSP81-1) (Heat shock protein 82) - Oryza sativa (Rice) & (reliability: 356.0) & (original description: Putative hsp83, Description = Heat shock protein 90, PFAM = PF00183)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00449_697631-702498' '(p09189|hsp7c_pethy : 1098.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at5g02500 : 1095.0) encodes a member of heat shock protein 70 family.; heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cold, response to virus, response to heat; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35323 : 905.0) no description available & (gnl|cdd|84440 : 898.0) no description available & (reliability: 2190.0) & (original description: Putative HSP70, Description = Heat shock cognate 70 kDa protein, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00454_166565-171640' '(at5g59610 : 188.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT4G39960.1); Has 23649 Blast hits to 23644 proteins in 3244 species: Archae - 193; Bacteria - 9673; Metazoa - 3994; Fungi - 2050; Plants - 2390; Viruses - 23; Other Eukaryotes - 5326 (source: NCBI BLink). & (gnl|cdd|30832 : 99.5) no description available & (gnl|cdd|35934 : 84.4) no description available & (reliability: 376.0) & (original description: Putative DJC73, Description = DnaJ, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00519_13026-33941' '(at1g18700 : 663.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Thioredoxin-like fold (InterPro:IPR012336). & (reliability: 1326.0) & (original description: Putative At1g18700, Description = DNAJ heat shock N-terminal domain-containing protein, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00528_32060-43619' '(at5g48030 : 491.0) encodes a mitochondrially targeted DNAJ protein involved in female gametophyte development.; gametophytic factor 2 (GFA2); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: in 7 processes; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT1G28210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30832 : 371.0) no description available & (gnl|cdd|35934 : 212.0) no description available & (q04960|dnjh_cucsa : 147.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 982.0) & (original description: Putative GFA2, Description = Chaperone protein dnaJ GFA2, mitochondrial, PFAM = PF00684;PF00226;PF01556)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00530_409762-414317' '(at5g53150 : 509.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G05230.1); Has 19161 Blast hits to 18960 proteins in 3050 species: Archae - 127; Bacteria - 8115; Metazoa - 3268; Fungi - 1518; Plants - 2179; Viruses - 8; Other Eukaryotes - 3946 (source: NCBI BLink). & (gnl|cdd|84624 : 82.9) no description available & (reliability: 1018.0) & (original description: Putative BnaC09g29390D, Description = BnaC09g29390D protein, PFAM = PF00226;PF11926)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00571_847684-852254' '(at5g53150 : 443.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G05230.1); Has 19161 Blast hits to 18960 proteins in 3050 species: Archae - 127; Bacteria - 8115; Metazoa - 3268; Fungi - 1518; Plants - 2179; Viruses - 8; Other Eukaryotes - 3946 (source: NCBI BLink). & (gnl|cdd|84624 : 83.6) no description available & (reliability: 886.0) & (original description: Putative DNAJ1, Description = Curved DNA-binding protein, PFAM = PF00226;PF11926)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00593_86861-103251' '(at3g47940 : 399.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT1G10350.1); Has 27840 Blast hits to 26488 proteins in 3397 species: Archae - 203; Bacteria - 10747; Metazoa - 4580; Fungi - 2597; Plants - 2794; Viruses - 15; Other Eukaryotes - 6904 (source: NCBI BLink). & (gnl|cdd|35933 : 190.0) no description available & (gnl|cdd|30832 : 190.0) no description available & (q04960|dnjh_cucsa : 90.5) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 798.0) & (original description: Putative v1g233916, Description = Predicted protein, PFAM = PF00226;PF01556)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00654_251293-253787' '(at3g13310 : 88.2) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT2G17880.1); Has 19059 Blast hits to 19056 proteins in 3143 species: Archae - 142; Bacteria - 8678; Metazoa - 3049; Fungi - 1540; Plants - 1805; Viruses - 5; Other Eukaryotes - 3840 (source: NCBI BLink). & (gnl|cdd|30832 : 84.9) no description available & (reliability: 176.4) & (original description: Putative At3g13310, Description = Co-chaperone-curved DNA binding protein A, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00698_53141-65022' '(at4g16660 : 1081.0) heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (Hsp 70) family protein (TAIR:AT1G11660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35327 : 568.0) no description available & (gnl|cdd|84440 : 286.0) no description available & (p09189|hsp7c_pethy : 218.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 2162.0) & (original description: Putative hsp70G, Description = Heat shock 70 kDa protein 17, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00705_405195-407752' '(at4g10250 : 135.0) Columbia endomembrane-localized small heat shock protein; ATHSP22.0; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to heat; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G07400.1); Has 7552 Blast hits to 7552 proteins in 1747 species: Archae - 200; Bacteria - 4479; Metazoa - 74; Fungi - 263; Plants - 1560; Viruses - 4; Other Eukaryotes - 972 (source: NCBI BLink). & (p30236|hsp41_soybn : 135.0) 22.0 kDa class IV heat shock protein precursor - Glycine max (Soybean) & (gnl|cdd|35929 : 104.0) no description available & (gnl|cdd|84439 : 102.0) no description available & (reliability: 270.0) & (original description: Putative hsp17, Description = 22.0 kDa class IV heat shock protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00749_610247-616489' '(at5g18140 : 198.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT2G22360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35934 : 96.7) no description available & (gnl|cdd|30832 : 96.4) no description available & (reliability: 396.0) & (original description: Putative cbpA, Description = Chaperone protein DnaJ, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00758_753339-758502' '(at3g52490 : 664.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G57710.1); Has 7668 Blast hits to 7397 proteins in 2358 species: Archae - 25; Bacteria - 6450; Metazoa - 2; Fungi - 186; Plants - 346; Viruses - 0; Other Eukaryotes - 659 (source: NCBI BLink). & (gnl|cdd|36269 : 433.0) no description available & (reliability: 1328.0) & (original description: Putative SMXL3, Description = Protein SMAX1-LIKE 3, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben101scf00912_868331-873395' '(at3g52490 : 600.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G57710.1); Has 7668 Blast hits to 7397 proteins in 2358 species: Archae - 25; Bacteria - 6450; Metazoa - 2; Fungi - 186; Plants - 346; Viruses - 0; Other Eukaryotes - 659 (source: NCBI BLink). & (gnl|cdd|36269 : 442.0) no description available & (reliability: 1200.0) & (original description: Putative SMXL3, Description = Clp, N-terminal, PFAM = PF02861;PF02861)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf01005_17571-21685' '(at5g64360 : 160.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G09540.1); Has 2668 Blast hits to 2652 proteins in 821 species: Archae - 47; Bacteria - 1266; Metazoa - 509; Fungi - 114; Plants - 564; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative At5g64360, Description = AT5G64360 protein, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf01027_55267-62767' '(at5g52640 : 1028.0) Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance.; heat shock protein 90.1 (HSP90.1); FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: defense response to bacterium, response to heat, response to arsenic; LOCATED IN: cytosol, cell wall, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 81.4 (TAIR:AT5G56000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p51819|hsp83_iponi : 1023.0) Heat shock protein 83 - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35242 : 817.0) no description available & (gnl|cdd|84591 : 746.0) no description available & (reliability: 2056.0) & (original description: Putative HSP83A, Description = Heat shock protein 83, PFAM = PF02518;PF00183)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf01063_1-4267' '(at5g16650 : 139.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT2G33735.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30832 : 100.0) no description available & (gnl|cdd|35932 : 82.4) no description available & (reliability: 278.0) & (original description: Putative cbpA, Description = Chaperone protein DnaJ, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf01171_452933-456997' '(at4g13830 : 172.0) DnaJ-like protein (J20); nuclear gene; DNAJ-like 20 (J20); FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding, response to stress; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT4G39960.1); Has 22791 Blast hits to 22789 proteins in 3231 species: Archae - 176; Bacteria - 9466; Metazoa - 3791; Fungi - 2164; Plants - 2102; Viruses - 8; Other Eukaryotes - 5084 (source: NCBI BLink). & (gnl|cdd|30832 : 91.4) no description available & (reliability: 344.0) & (original description: Putative ATJ20, Description = Chaperone protein dnaJ 20, chloroplastic, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf01301_236410-297357' '(at2g26890 : 3362.0) GRV2 has sequence similarity to the C. elegans protein RME-8 which is involved in endocytosis. grv2 mutants result in a reduction in gravitropic response in hypocotyls and shoots but do not affect root gravitropism. The mutants are defective in amyloplast sedimentation.; GRAVITROPISM DEFECTIVE 2 (GRV2); FUNCTIONS IN: binding, heat shock protein binding; INVOLVED IN: in 10 processes; LOCATED IN: in 6 components; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37000 : 1957.0) no description available & (reliability: 6724.0) & (original description: Putative GRV2, Description = DnaJ homolog subfamily C GRV2, PFAM = PF00226;PF14237)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf01305_158762-172103' '(at1g32330 : 318.0) Member of Heat Stress Transcription Factor (Hsf) family. Negatively regulated by HSP90.2.; heat shock transcription factor A1D (HSFA1D); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to heat; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock factor 1 (TAIR:AT4G17750.1); Has 2363 Blast hits to 2344 proteins in 251 species: Archae - 0; Bacteria - 10; Metazoa - 417; Fungi - 488; Plants - 855; Viruses - 2; Other Eukaryotes - 591 (source: NCBI BLink). & (gnl|cdd|84779 : 231.0) no description available & (gnl|cdd|35846 : 219.0) no description available & (reliability: 594.0) & (original description: Putative HSF8, Description = Heat shock factor protein HSF8, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf01319_602646-605125' '(at2g17880 : 90.5) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G36040.1); Has 19677 Blast hits to 19677 proteins in 3133 species: Archae - 135; Bacteria - 8632; Metazoa - 3284; Fungi - 1660; Plants - 1836; Viruses - 5; Other Eukaryotes - 4125 (source: NCBI BLink). & (gnl|cdd|30832 : 87.2) no description available & (reliability: 181.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf01375_841993-851452' '(at1g79940 : 800.0) J domain protein localized in ER membrane. Mutants have defective pollen germination.; ATERDJ2A; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion, integral to endoplasmic reticulum membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DnaJ / Sec63 Brl domains-containing protein (TAIR:AT4G21180.1). & (gnl|cdd|36169 : 293.0) no description available & (gnl|cdd|47902 : 188.0) no description available & (reliability: 1600.0) & (original description: Putative C21, Description = DnaJ / Sec63 Brl domains-containing protein, PFAM = PF00226;PF02889)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf01382_243784-247945' '(p26413|hsp70_soybn : 981.0) Heat shock 70 kDa protein - Glycine max (Soybean) & (at1g16030 : 969.0) heat shock protein 70B (Hsp70b); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: cytosol, cell wall, plasma membrane, chloroplast, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (TAIR:AT3G12580.1); Has 33913 Blast hits to 33562 proteins in 4835 species: Archae - 164; Bacteria - 16454; Metazoa - 3784; Fungi - 1785; Plants - 1262; Viruses - 309; Other Eukaryotes - 10155 (source: NCBI BLink). & (gnl|cdd|84440 : 892.0) no description available & (gnl|cdd|35323 : 890.0) no description available & (reliability: 1938.0) & (original description: Putative SSA3, Description = Heat shock protein SSA3, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf01412_182729-185487' '(at1g54050 : 133.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 4491 Blast hits to 4491 proteins in 1181 species: Archae - 166; Bacteria - 2520; Metazoa - 2; Fungi - 140; Plants - 1242; Viruses - 0; Other Eukaryotes - 421 (source: NCBI BLink). & (p05477|hsp21_soybn : 95.1) 17.9 kDa class II heat shock protein - Glycine max (Soybean) & (gnl|cdd|84439 : 84.9) no description available & (gnl|cdd|35929 : 84.4) no description available & (reliability: 266.0) & (original description: Putative hsp2, Description = 17.2 kDa class II heat shock protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf01475_92379-94576' '(at5g59720 : 184.0) encodes a low molecular weight heat shock protein that contains the heat shock element in the promoter region. Expression is induced in response to heat shock.; heat shock protein 18.2 (HSP18.2); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p27396|hsp11_dauca : 181.0) 17.8 kDa class I heat shock protein (Clone DCHSP17.7) - Daucus carota (Carrot) & (gnl|cdd|84439 : 111.0) no description available & (gnl|cdd|35929 : 109.0) no description available & (reliability: 368.0) & (original description: Putative hsp17, Description = 17.5 kd heat shock family protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf01506_408328-411944' '(at2g32120 : 858.0) heat-shock protein 70T-2 (HSP70T-2); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to high light intensity, response to hydrogen peroxide, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (TAIR:AT3G12580.1); Has 23745 Blast hits to 23668 proteins in 4473 species: Archae - 147; Bacteria - 10488; Metazoa - 3198; Fungi - 1451; Plants - 1078; Viruses - 114; Other Eukaryotes - 7269 (source: NCBI BLink). & (gnl|cdd|35324 : 385.0) no description available & (gnl|cdd|84440 : 322.0) no description available & (p09189|hsp7c_pethy : 305.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 1716.0) & (original description: Putative HSP70-8, Description = Heat shock 70 kDa protein 8, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf01529_447108-465886' '(gnl|cdd|84779 : 121.0) no description available & (gnl|cdd|35846 : 113.0) no description available & (at5g03720 : 107.0) Member of Heat Stress Transcription Factor (Hsf) family. Expression is regulated by DREB2A and in turn HSFA3 regulates the expression of hsps Hsp18.1-CI and Hsp26.5-MII35S. Involved in establishing thermotolerence.; heat shock transcription factor A3 (HSFA3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to heat, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative PGSC0003DMG400041361, Description = Putative ovule protein, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf01556_484429-487315' '(at5g64360 : 105.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G09540.1); Has 2668 Blast hits to 2652 proteins in 821 species: Archae - 47; Bacteria - 1266; Metazoa - 509; Fungi - 114; Plants - 564; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative At5g64360, Description = AT5G64360 protein, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf01623_1503678-1507884' '(at2g47440 : 642.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G62570.1); Has 357 Blast hits to 345 proteins in 102 species: Archae - 0; Bacteria - 6; Metazoa - 79; Fungi - 59; Plants - 180; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 1284.0) & (original description: Putative At3g62570, Description = AT3g62570/T12C14_270, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben101scf01635_118903-124654' '(at5g57710 : 827.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: response to karrikin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-2 (InterPro:IPR013093); BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G30350.1); Has 16657 Blast hits to 15152 proteins in 2785 species: Archae - 23; Bacteria - 13282; Metazoa - 28; Fungi - 336; Plants - 548; Viruses - 0; Other Eukaryotes - 2440 (source: NCBI BLink). & (gnl|cdd|36269 : 543.0) no description available & (reliability: 1654.0) & (original description: Putative SMAX1, Description = Protein SUPPRESSOR OF MAX2 1, PFAM = PF07724)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf01704_4114-12570' '(at3g62600 : 519.0) J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast. Forms a complex SDF2-ERdj3B-BiP that is required for the proper accumulation of the surface-exposed leucine-rich repeat receptor kinases EFR. EFR is involved in PAMP (pathogen associated molecular patterns) triggered immunity.; ATERDJ3B; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, PAMP-induced immunity; LOCATED IN: plasma membrane, endoplasmic reticulum lumen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT3G08910.1); Has 27934 Blast hits to 27869 proteins in 3473 species: Archae - 187; Bacteria - 10337; Metazoa - 4624; Fungi - 2578; Plants - 2760; Viruses - 17; Other Eukaryotes - 7431 (source: NCBI BLink). & (gnl|cdd|35932 : 352.0) no description available & (gnl|cdd|30832 : 255.0) no description available & (q04960|dnjh_cucsa : 164.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 1038.0) & (original description: Putative DNAJB11, Description = DnaJ homolog subfamily B member 11, PFAM = PF01556;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf01704_209335-213518' '(at4g02100 : 579.0) Heat shock protein DnaJ with tetratricopeptide repeat; FUNCTIONS IN: binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G47440.1); Has 318 Blast hits to 309 proteins in 95 species: Archae - 0; Bacteria - 4; Metazoa - 68; Fungi - 63; Plants - 160; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 1158.0) & (original description: Putative At3g62570, Description = AT3g62570/T12C14_270, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben101scf01777_284012-288052' '(at2g26150 : 335.0) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.; heat shock transcription factor A2 (HSFA2); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84779 : 209.0) no description available & (gnl|cdd|35846 : 204.0) no description available & (reliability: 670.0) & (original description: Putative HSF30, Description = Heat shock factor protein HSF30, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf01812_283551-286836' '(at1g54400 : 82.8) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT2G27140.1); Has 638 Blast hits to 638 proteins in 68 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 34; Plants - 583; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative PGSC0003DMG400007210, Description = , PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf01834_392273-397783' '(at3g52490 : 405.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G57710.1); Has 7668 Blast hits to 7397 proteins in 2358 species: Archae - 25; Bacteria - 6450; Metazoa - 2; Fungi - 186; Plants - 346; Viruses - 0; Other Eukaryotes - 659 (source: NCBI BLink). & (gnl|cdd|36269 : 381.0) no description available & (reliability: 810.0) & (original description: Putative SMXL3, Description = Os04g0298700 protein, PFAM = PF02861;PF02861)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf01940_1445-16560' '(at3g17830 : 409.0) Molecular chaperone Hsp40/DnaJ family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Chaperone DnaJ (InterPro:IPR012724), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT1G80030.2); Has 28823 Blast hits to 28018 proteins in 3494 species: Archae - 196; Bacteria - 10926; Metazoa - 4489; Fungi - 2504; Plants - 2754; Viruses - 18; Other Eukaryotes - 7936 (source: NCBI BLink). & (gnl|cdd|30832 : 349.0) no description available & (gnl|cdd|35934 : 205.0) no description available & (q04960|dnjh_cucsa : 108.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 818.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF00226;PF00684;PF01556)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf01972_810236-812727' '(at3g22530 : 128.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14830.1); Has 77 Blast hits to 77 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative BnaA05g17110D, Description = BnaA05g17110D protein, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben101scf01999_616981-632067' '(q08276|hsp7m_soltu : 1097.0) Heat shock 70 kDa protein, mitochondrial precursor - Solanum tuberosum (Potato) & (at5g09590 : 1049.0) heat shock protein 70 (Hsc70-5); nuclear; mitochondrial HSO70 2 (MTHSC70-2); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cadmium ion, response to salt stress, response to virus, response to heat; LOCATED IN: mitochondrion, cell wall, plasma membrane, chloroplast, mitochondrial matrix; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Chaperone DnaK (InterPro:IPR012725), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: mitochondrial heat shock protein 70-1 (TAIR:AT4G37910.1); Has 35090 Blast hits to 34955 proteins in 4871 species: Archae - 160; Bacteria - 17405; Metazoa - 3531; Fungi - 1665; Plants - 1246; Viruses - 305; Other Eukaryotes - 10778 (source: NCBI BLink). & (gnl|cdd|80608 : 983.0) no description available & (gnl|cdd|35325 : 938.0) no description available & (reliability: 2098.0) & (original description: Putative HSP68, Description = Heat shock 70 kDa protein, mitochondrial, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf02030_449115-456154' '(q03684|bip4_tobac : 1107.0) Luminal-binding protein 4 precursor (BiP 4) (78 kDa glucose-regulated protein homolog 4) (GRP 78-4) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35323 : 1081.0) no description available & (at5g28540 : 1074.0) Encodes the luminal binding protein BiP, an ER-localized member of the HSP70 family. BiP is composed of an N-terminal ATP binding domain and a C-terminal domain that binds to hydrophobic patches on improperly/incompletely folded proteins in an ATP-dependent manner. Involved in polar nuclei fusion during proliferation of endosperm nuclei.; BIP1; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, ER-associated protein catabolic process, response to heat, polar nucleus fusion; LOCATED IN: cell wall, plasma membrane, chloroplast, vacuole, endoplasmic reticulum lumen; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G42020.1); Has 36391 Blast hits to 35786 proteins in 4820 species: Archae - 162; Bacteria - 17493; Metazoa - 3988; Fungi - 1814; Plants - 1283; Viruses - 341; Other Eukaryotes - 11310 (source: NCBI BLink). & (gnl|cdd|84440 : 858.0) no description available & (reliability: 2148.0) & (original description: Putative MED37F, Description = Mediator of RNA polymerase II transcription subunit 37f, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf02034_263998-271339' '(at2g29970 : 620.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G07200.2); Has 10913 Blast hits to 10488 proteins in 2533 species: Archae - 15; Bacteria - 9122; Metazoa - 6; Fungi - 149; Plants - 525; Viruses - 0; Other Eukaryotes - 1096 (source: NCBI BLink). & (gnl|cdd|36269 : 463.0) no description available & (reliability: 1240.0) & (original description: Putative fad3a, Description = AtD53-like 3, PFAM = PF07724)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf02043_264775-269915' '(at1g59725 : 380.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT1G10350.1); Has 28155 Blast hits to 27844 proteins in 3478 species: Archae - 176; Bacteria - 10528; Metazoa - 4629; Fungi - 2607; Plants - 2835; Viruses - 20; Other Eukaryotes - 7360 (source: NCBI BLink). & (gnl|cdd|35931 : 177.0) no description available & (gnl|cdd|30832 : 144.0) no description available & (q04960|dnjh_cucsa : 92.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 760.0) & (original description: Putative hsp40, Description = Heat shock protein 40, PFAM = PF00226;PF01556)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf02124_147651-152021' '(p26413|hsp70_soybn : 1063.0) Heat shock 70 kDa protein - Glycine max (Soybean) & (at1g16030 : 1050.0) heat shock protein 70B (Hsp70b); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: cytosol, cell wall, plasma membrane, chloroplast, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (TAIR:AT3G12580.1); Has 33913 Blast hits to 33562 proteins in 4835 species: Archae - 164; Bacteria - 16454; Metazoa - 3784; Fungi - 1785; Plants - 1262; Viruses - 309; Other Eukaryotes - 10155 (source: NCBI BLink). & (gnl|cdd|35323 : 908.0) no description available & (gnl|cdd|84440 : 893.0) no description available & (reliability: 2100.0) & (original description: Putative HSP70, Description = Heat shock 70 kDa protein, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf02124_193956-197823' '(at1g80920 : 108.0) A nuclear encoded soluble protein found in the chloroplast stroma.; J8; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, response to stress; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT3G05345.1); Has 10939 Blast hits to 10938 proteins in 2525 species: Archae - 126; Bacteria - 6057; Metazoa - 1338; Fungi - 591; Plants - 814; Viruses - 3; Other Eukaryotes - 2010 (source: NCBI BLink). & (gnl|cdd|35934 : 80.9) no description available & (reliability: 216.0) & (original description: Putative ATJ8, Description = Chaperone protein dnaJ 8, chloroplastic, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf02230_265077-269376' '(at2g41000 : 124.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT3G08910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30832 : 95.7) no description available & (reliability: 248.0) & (original description: Putative ATJ72, Description = Chaperone protein dnaJ 72, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf02257_196599-204941' '(at2g42750 : 415.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G23240.1); Has 17700 Blast hits to 17698 proteins in 3061 species: Archae - 180; Bacteria - 8514; Metazoa - 2668; Fungi - 1485; Plants - 1554; Viruses - 15; Other Eukaryotes - 3284 (source: NCBI BLink). & (gnl|cdd|35935 : 160.0) no description available & (gnl|cdd|84624 : 81.3) no description available & (reliability: 830.0) & (original description: Putative dnj38, Description = Chloroplast heat shock protein-binding protein, PFAM = PF13370;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf02470_138394-152634' '(at1g11040 : 200.0) HSP40/DnaJ peptide-binding protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: HSP40/DnaJ peptide-binding protein (TAIR:AT1G44160.1); Has 19507 Blast hits to 13358 proteins in 2831 species: Archae - 102; Bacteria - 8184; Metazoa - 2012; Fungi - 1146; Plants - 786; Viruses - 38; Other Eukaryotes - 7239 (source: NCBI BLink). & (gnl|cdd|30832 : 146.0) no description available & (gnl|cdd|35933 : 144.0) no description available & (reliability: 400.0) & (original description: Putative DNAJ, Description = DnaJ-like protein, PFAM = PF00226;PF01556)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf02513_1373-3843' '(p05477|hsp21_soybn : 205.0) 17.9 kDa class II heat shock protein - Glycine max (Soybean) & (at5g12020 : 147.0) 17.6 kDa class II heat shock protein (HSP17.6II); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84439 : 118.0) no description available & (gnl|cdd|35929 : 117.0) no description available & (reliability: 294.0) & (original description: Putative hsp2, Description = Low molecular weight heat shock protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf02647_61174-65501' '(at2g05230 : 598.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G05250.1); Has 13630 Blast hits to 13432 proteins in 2557 species: Archae - 75; Bacteria - 5761; Metazoa - 2469; Fungi - 964; Plants - 1524; Viruses - 9; Other Eukaryotes - 2828 (source: NCBI BLink). & (reliability: 1196.0) & (original description: Putative At2g25560, Description = At2g25560/F13B15.22, PFAM = PF00226;PF11926)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf02664_145477-168702' '(at1g65280 : 464.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Protein of unknown function DUF3752 (InterPro:IPR022226); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G22080.2); Has 26180 Blast hits to 20391 proteins in 2424 species: Archae - 138; Bacteria - 5225; Metazoa - 9539; Fungi - 2558; Plants - 2202; Viruses - 36; Other Eukaryotes - 6482 (source: NCBI BLink). & (gnl|cdd|39390 : 129.0) no description available & (reliability: 928.0) & (original description: Putative BnaA09g23070D, Description = BnaA09g23070D protein, PFAM = PF12572;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf02737_428830-431982' '(at1g53540 : 121.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.4 (TAIR:AT3G46230.1); Has 7090 Blast hits to 7089 proteins in 1610 species: Archae - 175; Bacteria - 4287; Metazoa - 66; Fungi - 302; Plants - 1606; Viruses - 0; Other Eukaryotes - 654 (source: NCBI BLink). & (p04794|hsp14_soybn : 114.0) 17.5 kDa class I heat shock protein (HSP 17.5-E) - Glycine max (Soybean) & (gnl|cdd|35929 : 110.0) no description available & (gnl|cdd|84439 : 108.0) no description available & (reliability: 242.0) & (original description: Putative hsp17, Description = Low molecular weight heat shock protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf02771_132776-137895' '(p09189|hsp7c_pethy : 1097.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at3g12580 : 1092.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (gnl|cdd|35323 : 898.0) no description available & (gnl|cdd|84440 : 896.0) no description available & (reliability: 2184.0) & (original description: Putative hspB, Description = Heat shock protein 70, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf02774_142858-146438' '(at5g37670 : 159.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G59860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p04794|hsp14_soybn : 100.0) 17.5 kDa class I heat shock protein (HSP 17.5-E) - Glycine max (Soybean) & (gnl|cdd|35929 : 97.1) no description available & (gnl|cdd|84439 : 87.6) no description available & (reliability: 318.0) & (original description: Putative HSP18, Description = 15.7 kDa heat shock protein, peroxisomal, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf02819_3543-6323' '(at1g52560 : 206.0) HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to high light intensity, response to hydrogen peroxide, response to heat; LOCATED IN: mitochondrion; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 21 (TAIR:AT4G27670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p09887|hs22c_soybn : 97.1) Chloroplast small heat shock protein (Fragment) - Glycine max (Soybean) & (gnl|cdd|84439 : 93.7) no description available & (gnl|cdd|35929 : 87.9) no description available & (reliability: 412.0) & (original description: Putative HSP26.5, Description = 26.5 kDa heat shock protein, mitochondrial, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf02819_431430-452834' '(at1g80030 : 527.0) Molecular chaperone Hsp40/DnaJ family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Chaperone DnaJ (InterPro:IPR012724), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT3G17830.1); Has 29578 Blast hits to 28478 proteins in 3517 species: Archae - 197; Bacteria - 11603; Metazoa - 4491; Fungi - 2484; Plants - 2799; Viruses - 20; Other Eukaryotes - 7984 (source: NCBI BLink). & (gnl|cdd|30832 : 383.0) no description available & (gnl|cdd|35934 : 206.0) no description available & (q04960|dnjh_cucsa : 118.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 1054.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF00226;PF00684;PF01556)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf02824_402457-412386' '(at2g04030 : 1122.0) Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR.; CR88; FUNCTIONS IN: ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: mitochondrion, chloroplast stroma, plasma membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 89.1 (TAIR:AT3G07770.1); Has 8908 Blast hits to 8859 proteins in 2447 species: Archae - 4; Bacteria - 3393; Metazoa - 2086; Fungi - 314; Plants - 461; Viruses - 0; Other Eukaryotes - 2650 (source: NCBI BLink). & (gnl|cdd|35242 : 735.0) no description available & (gnl|cdd|81471 : 672.0) no description available & (p51819|hsp83_iponi : 527.0) Heat shock protein 83 - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 2244.0) & (original description: Putative hspD, Description = Heat shock protein 90, PFAM = PF02518;PF00183)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf02835_100805-103796' '(at1g76770 : 124.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G76780.1); Has 34199 Blast hits to 13978 proteins in 906 species: Archae - 121; Bacteria - 2729; Metazoa - 11362; Fungi - 2329; Plants - 1617; Viruses - 809; Other Eukaryotes - 15232 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative BnaA07g33050D, Description = BnaA07g33050D protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf02852_63675-70963' '(at3g07770 : 1084.0) HEAT SHOCK PROTEIN 89.1 (Hsp89.1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to stress; LOCATED IN: mitochondrion, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Chaperone protein htpG family protein (TAIR:AT2G04030.1); Has 8883 Blast hits to 8831 proteins in 2450 species: Archae - 4; Bacteria - 3390; Metazoa - 2079; Fungi - 316; Plants - 459; Viruses - 0; Other Eukaryotes - 2635 (source: NCBI BLink). & (gnl|cdd|35242 : 712.0) no description available & (gnl|cdd|81471 : 640.0) no description available & (p36183|enpl_horvu : 518.0) Endoplasmin homolog precursor (GRP94 homolog) - Hordeum vulgare (Barley) & (reliability: 2168.0) & (original description: Putative hspD, Description = Heat shock protein 90, PFAM = PF02518;PF00183)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf02877_271818-275548' '(at1g06460 : 145.0) ACD32.1 encodes an alpha-crystallin domain containing protein with homology to small heat shock proteins.; alpha-crystallin domain 32.1 (ACD32.1); INVOLVED IN: response to heat; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 3590 Blast hits to 3590 proteins in 1004 species: Archae - 36; Bacteria - 2284; Metazoa - 1; Fungi - 156; Plants - 751; Viruses - 0; Other Eukaryotes - 362 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative sHsp, Description = Putative small heat shock protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf02897_83141-95120' '(at1g79940 : 922.0) J domain protein localized in ER membrane. Mutants have defective pollen germination.; ATERDJ2A; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion, integral to endoplasmic reticulum membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DnaJ / Sec63 Brl domains-containing protein (TAIR:AT4G21180.1). & (gnl|cdd|36169 : 355.0) no description available & (gnl|cdd|47902 : 206.0) no description available & (reliability: 1844.0) & (original description: Putative ERDJ2A, Description = DnaJ protein ERDJ2A, PFAM = PF02889;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf02982_169439-172922' '(at4g13830 : 158.0) DnaJ-like protein (J20); nuclear gene; DNAJ-like 20 (J20); FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding, response to stress; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT4G39960.1); Has 22791 Blast hits to 22789 proteins in 3231 species: Archae - 176; Bacteria - 9466; Metazoa - 3791; Fungi - 2164; Plants - 2102; Viruses - 8; Other Eukaryotes - 5084 (source: NCBI BLink). & (gnl|cdd|30832 : 88.4) no description available & (reliability: 316.0) & (original description: Putative C20, Description = Heat shock protein DnaJ, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf03009_6421-15507' '(at4g37480 : 535.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT3G17830.1); Has 20733 Blast hits to 20731 proteins in 3179 species: Archae - 168; Bacteria - 8743; Metazoa - 3732; Fungi - 1762; Plants - 1875; Viruses - 8; Other Eukaryotes - 4445 (source: NCBI BLink). & (gnl|cdd|35932 : 85.4) no description available & (gnl|cdd|30832 : 82.2) no description available & (reliability: 1070.0) & (original description: Putative Os03g0761700, Description = DnaJ domain containing protein, expressed, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf03038_1360307-1374724' '(at4g36990 : 239.0) encodes a protein whose sequence is similar to heat shock factors that regulate the expression of heat shock proteins. Transcript level is increased in response to heat shock. However, overexpression of this gene did not result in the increase of decrease of heat shock proteins.; heat shock factor 4 (HSF4); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to cyclopentenone, response to heat; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 2101 Blast hits to 2087 proteins in 226 species: Archae - 0; Bacteria - 2; Metazoa - 340; Fungi - 475; Plants - 774; Viruses - 0; Other Eukaryotes - 510 (source: NCBI BLink). & (gnl|cdd|84779 : 153.0) no description available & (gnl|cdd|35846 : 150.0) no description available & (reliability: 478.0) & (original description: Putative HSF24, Description = Heat shock factor protein HSF24, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf03121_463893-470872' '(gnl|cdd|80608 : 962.0) no description available & (at4g24280 : 957.0) Involved in protein import into chloroplasts during early developmental stages.; chloroplast heat shock protein 70-1 (cpHsc70-1); FUNCTIONS IN: protein binding, ATP binding; INVOLVED IN: protein folding, response to cadmium ion, protein targeting to chloroplast, response to cold; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Chaperone DnaK (InterPro:IPR012725), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: chloroplast heat shock protein 70-2 (TAIR:AT5G49910.1); Has 36155 Blast hits to 36031 proteins in 4857 species: Archae - 160; Bacteria - 17964; Metazoa - 3544; Fungi - 1694; Plants - 1235; Viruses - 354; Other Eukaryotes - 11204 (source: NCBI BLink). & (q02028|hsp7s_pea : 947.0) Stromal 70 kDa heat shock-related protein, chloroplast precursor - Pisum sativum (Garden pea) & (gnl|cdd|35325 : 798.0) no description available & (reliability: 1914.0) & (original description: Putative dnaK, Description = Heat shock protein 70 chaperone, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf03142_541567-548777' '(at4g29920 : 629.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: protein metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Clp amino terminal domain-containing protein (TAIR:AT5G57130.1); Has 2205 Blast hits to 2155 proteins in 769 species: Archae - 7; Bacteria - 1557; Metazoa - 28; Fungi - 31; Plants - 337; Viruses - 0; Other Eukaryotes - 245 (source: NCBI BLink). & (gnl|cdd|36269 : 404.0) no description available & (reliability: 1258.0) & (original description: Putative Os04g0298700, Description = Os04g0298700 protein, PFAM = PF02861)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf03169_5453-9858' '(at2g20560 : 375.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT4G28480.1); Has 27936 Blast hits to 27733 proteins in 3449 species: Archae - 187; Bacteria - 10270; Metazoa - 4781; Fungi - 2609; Plants - 2869; Viruses - 17; Other Eukaryotes - 7203 (source: NCBI BLink). & (gnl|cdd|30832 : 208.0) no description available & (gnl|cdd|35933 : 206.0) no description available & (q04960|dnjh_cucsa : 96.3) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 750.0) & (original description: Putative hsp40, Description = Heat shock protein 40, PFAM = PF00226;PF01556)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf03202_540118-547672' '(at3g08970 : 422.0) J domain protein localized in ER lumen. Can compensate for the growth defect in jem1 scj1 mutant yeast. Also shows similarity to HSP40 proteins and is induced by heat stress. At high temperatures, mutant alleles are not transmitted through the pollen due to defects in pollen tube growth.; ATERDJ3A; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Thioredoxin-like fold (InterPro:IPR012336), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT2G22360.1); Has 29746 Blast hits to 27935 proteins in 3434 species: Archae - 203; Bacteria - 10482; Metazoa - 6798; Fungi - 2759; Plants - 3202; Viruses - 20; Other Eukaryotes - 6282 (source: NCBI BLink). & (gnl|cdd|30832 : 124.0) no description available & (gnl|cdd|35932 : 107.0) no description available & (reliability: 844.0) & (original description: Putative ERDJ3A, Description = DnaJ protein ERDJ3A, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf03252_207130-209864' '(at2g26150 : 140.0) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.; heat shock transcription factor A2 (HSFA2); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84779 : 128.0) no description available & (gnl|cdd|35846 : 124.0) no description available & (reliability: 280.0) & (original description: Putative HSF12, Description = HSF12, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf03254_1457554-1461642' '(at5g23240 : 145.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G42750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative fer, Description = Ferredoxin, PFAM = PF00226;PF13370)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf03349_59153-70337' '(at3g62600 : 539.0) J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast. Forms a complex SDF2-ERdj3B-BiP that is required for the proper accumulation of the surface-exposed leucine-rich repeat receptor kinases EFR. EFR is involved in PAMP (pathogen associated molecular patterns) triggered immunity.; ATERDJ3B; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, PAMP-induced immunity; LOCATED IN: plasma membrane, endoplasmic reticulum lumen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT3G08910.1); Has 27934 Blast hits to 27869 proteins in 3473 species: Archae - 187; Bacteria - 10337; Metazoa - 4624; Fungi - 2578; Plants - 2760; Viruses - 17; Other Eukaryotes - 7431 (source: NCBI BLink). & (gnl|cdd|35932 : 354.0) no description available & (gnl|cdd|30832 : 259.0) no description available & (q04960|dnjh_cucsa : 164.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 1078.0) & (original description: Putative ERDJ3B, Description = DnaJ protein ERDJ3B, PFAM = PF01556;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf03460_788090-795920' '(at1g24120 : 530.0) encodes a DnaJ-like protein similar to ARG1 and ARL2 that are both involved in root and hypocotyl gravitropism response. However, null mutation in this gene does not result in defects in gravitropism. Gene is expressed in all tissues examined.; ARG1-like 1 (ARL1); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: ARG1-like 2 (TAIR:AT1G59980.1); Has 24851 Blast hits to 24751 proteins in 3316 species: Archae - 174; Bacteria - 9800; Metazoa - 4410; Fungi - 2460; Plants - 2464; Viruses - 13; Other Eukaryotes - 5530 (source: NCBI BLink). & (gnl|cdd|35932 : 296.0) no description available & (gnl|cdd|30832 : 108.0) no description available & (reliability: 1060.0) & (original description: Putative ATJ16, Description = Chaperone protein dnaJ 16, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf03478_91404-95028' '(at1g71000 : 131.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G56300.1); Has 22656 Blast hits to 22652 proteins in 3192 species: Archae - 173; Bacteria - 9479; Metazoa - 3801; Fungi - 1926; Plants - 2253; Viruses - 10; Other Eukaryotes - 5014 (source: NCBI BLink). & (gnl|cdd|30832 : 103.0) no description available & (gnl|cdd|35932 : 82.4) no description available & (reliability: 262.0) & (original description: Putative dnaJ, Description = DnaJ homolog subfamily B member 6, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf03518_487612-495873' '(at1g67970 : 215.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A8 (HSFA8); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock factor 1 (TAIR:AT4G17750.1); Has 2085 Blast hits to 2073 proteins in 225 species: Archae - 0; Bacteria - 3; Metazoa - 333; Fungi - 465; Plants - 781; Viruses - 0; Other Eukaryotes - 503 (source: NCBI BLink). & (gnl|cdd|35846 : 166.0) no description available & (gnl|cdd|84779 : 152.0) no description available & (reliability: 388.0) & (original description: Putative HSFA8, Description = Heat stress transcription factor A-8, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf03634_952361-959292' '(at5g06410 : 212.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding, chaperone binding; INVOLVED IN: protein folding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock cognate protein B, C-terminal oligomerisation (InterPro:IPR009073), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Co-chaperone Hsc20 (InterPro:IPR004640); Has 1884 Blast hits to 1884 proteins in 890 species: Archae - 0; Bacteria - 1464; Metazoa - 116; Fungi - 101; Plants - 38; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (gnl|cdd|38402 : 139.0) no description available & (gnl|cdd|81420 : 91.1) no description available & (reliability: 424.0) & (original description: Putative At5g06410, Description = Molecular chaperone HscB, PFAM = PF07743;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf03651_520607-535074' '(at5g12430 : 548.0) Heat shock protein DnaJ with tetratricopeptide repeat; FUNCTIONS IN: heat shock protein binding, binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Heat shock protein DnaJ with tetratricopeptide repeat (TAIR:AT2G41520.1); Has 27844 Blast hits to 24585 proteins in 3132 species: Archae - 222; Bacteria - 9738; Metazoa - 5941; Fungi - 3019; Plants - 3250; Viruses - 11; Other Eukaryotes - 5663 (source: NCBI BLink). & (gnl|cdd|35770 : 143.0) no description available & (reliability: 1082.0) & (original description: Putative BnaA10g30100D, Description = BnaA10g30100D protein, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf03662_39836-44558' '(at5g16820 : 339.0) Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes.; heat shock factor 3 (HSF3); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1E (TAIR:AT3G02990.1); Has 2455 Blast hits to 2420 proteins in 254 species: Archae - 0; Bacteria - 23; Metazoa - 373; Fungi - 496; Plants - 855; Viruses - 0; Other Eukaryotes - 708 (source: NCBI BLink). & (gnl|cdd|84779 : 229.0) no description available & (gnl|cdd|35846 : 213.0) no description available & (reliability: 678.0) & (original description: Putative HSF8, Description = Heat shock factor protein HSF8, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf03738_150501-153085' '(p19243|hsp11_pea : 105.0) 18.1 kDa class I heat shock protein (HSP 18.1) - Pisum sativum (Garden pea) & (at2g29500 : 93.2) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G07400.1); Has 6873 Blast hits to 6873 proteins in 1575 species: Archae - 184; Bacteria - 4083; Metazoa - 80; Fungi - 309; Plants - 1622; Viruses - 0; Other Eukaryotes - 595 (source: NCBI BLink). & (gnl|cdd|84439 : 86.0) no description available & (gnl|cdd|35929 : 83.6) no description available & (reliability: 186.4) & (original description: Putative hsp17, Description = Low molecular weight heat shock protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf03817_988921-1005084' '(at5g22080 : 271.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT1G65280.1). & (gnl|cdd|36365 : 94.4) no description available & (reliability: 542.0) & (original description: Putative dnj27, Description = Molecular chaperone, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf03817_988972-1004891' '(at5g22080 : 219.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT1G65280.1). & (reliability: 438.0) & (original description: Putative dnj27, Description = BnaA10g14230D protein, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf03817_1591044-1596217' '(q04960|dnjh_cucsa : 548.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (at5g22060 : 500.0) Co-chaperonin similar to E. coli DnaJ; DNAJ homologue 2 (J2); FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to salt stress; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Chaperone DnaJ (InterPro:IPR012724), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ homologue 3 (TAIR:AT3G44110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35931 : 398.0) no description available & (gnl|cdd|30832 : 324.0) no description available & (reliability: 1000.0) & (original description: Putative dnaJ, Description = Putative DNAJ protein, PFAM = PF01556;PF00684;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf03823_299335-303310' '(at3g14200 : 124.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G72416.2); Has 21914 Blast hits to 21906 proteins in 3169 species: Archae - 155; Bacteria - 8965; Metazoa - 3686; Fungi - 1997; Plants - 2132; Viruses - 13; Other Eukaryotes - 4966 (source: NCBI BLink). & (gnl|cdd|30832 : 84.1) no description available & (reliability: 248.0) & (original description: Putative dnaJ, Description = Heat shock protein binding protein, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04040_830035-832505' '(p05477|hsp21_soybn : 206.0) 17.9 kDa class II heat shock protein - Glycine max (Soybean) & (at5g12020 : 149.0) 17.6 kDa class II heat shock protein (HSP17.6II); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84439 : 123.0) no description available & (gnl|cdd|35929 : 119.0) no description available & (reliability: 298.0) & (original description: Putative hsp2, Description = Low molecular weight heat shock protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04040_833647-862021' '(p05477|hsp21_soybn : 204.0) 17.9 kDa class II heat shock protein - Glycine max (Soybean) & (at5g12020 : 147.0) 17.6 kDa class II heat shock protein (HSP17.6II); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84439 : 120.0) no description available & (gnl|cdd|35929 : 116.0) no description available & (reliability: 294.0) & (original description: Putative hsp2, Description = Low molecular weight heat shock protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04040_988311-990790' '(q01545|hsp22_iponi : 174.0) 18.8 kDa class II heat shock protein - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (at5g12020 : 152.0) 17.6 kDa class II heat shock protein (HSP17.6II); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35929 : 110.0) no description available & (gnl|cdd|84439 : 109.0) no description available & (reliability: 304.0) & (original description: Putative hsp2, Description = Small heat shock protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04083_417043-422490' '(q03685|bip5_tobac : 1122.0) Luminal-binding protein 5 precursor (BiP 5) (78 kDa glucose-regulated protein homolog 5) (GRP 78-5) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35323 : 1080.0) no description available & (at5g42020 : 1053.0) Luminal binding protein (BiP2) involved in polar nuclei fusion during proliferation of endosperm nuclei.; luminal binding protein (BIP); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cadmium ion, response to heat, polar nucleus fusion, response to endoplasmic reticulum stress; LOCATED IN: in 8 components; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G28540.1); Has 34912 Blast hits to 34423 proteins in 4667 species: Archae - 159; Bacteria - 17150; Metazoa - 3676; Fungi - 1797; Plants - 1301; Viruses - 340; Other Eukaryotes - 10489 (source: NCBI BLink). & (gnl|cdd|84440 : 854.0) no description available & (reliability: 2106.0) & (original description: Putative MED37F, Description = Mediator of RNA polymerase II transcription subunit 37f, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04091_33537-37037' '(at5g51440 : 125.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: mitochondrion-localized small heat shock protein 23.6 (TAIR:AT4G25200.1); Has 3995 Blast hits to 3995 proteins in 1037 species: Archae - 138; Bacteria - 2214; Metazoa - 5; Fungi - 114; Plants - 1208; Viruses - 0; Other Eukaryotes - 316 (source: NCBI BLink). & (p46254|hs22m_pea : 113.0) Heat shock 22 kDa protein, mitochondrial precursor - Pisum sativum (Garden pea) & (gnl|cdd|84439 : 84.1) no description available & (reliability: 250.0) & (original description: Putative HSP23, Description = Small heat shock protein, chloroplastic, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04096_617112-620203' '(at4g11660 : 250.0) member of Heat Stress Transcription Factor (Hsf) family; AT-HSFB2B; FUNCTIONS IN: transcription repressor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 32476 Blast hits to 10764 proteins in 847 species: Archae - 36; Bacteria - 10454; Metazoa - 9035; Fungi - 1651; Plants - 6330; Viruses - 666; Other Eukaryotes - 4304 (source: NCBI BLink). & (gnl|cdd|35846 : 155.0) no description available & (gnl|cdd|84779 : 150.0) no description available & (reliability: 500.0) & (original description: Putative HSFB2A, Description = Heat stress transcription factor B-2a, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04122_729703-732902' '(gnl|cdd|84779 : 110.0) no description available & (at5g03720 : 102.0) Member of Heat Stress Transcription Factor (Hsf) family. Expression is regulated by DREB2A and in turn HSFA3 regulates the expression of hsps Hsp18.1-CI and Hsp26.5-MII35S. Involved in establishing thermotolerence.; heat shock transcription factor A3 (HSFA3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to heat, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35846 : 101.0) no description available & (reliability: 199.6) & (original description: Putative HS1, Description = Heat shock transcription factor A3, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04171_341843-344304' '(at2g17880 : 117.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G36040.1); Has 19677 Blast hits to 19677 proteins in 3133 species: Archae - 135; Bacteria - 8632; Metazoa - 3284; Fungi - 1660; Plants - 1836; Viruses - 5; Other Eukaryotes - 4125 (source: NCBI BLink). & (gnl|cdd|30832 : 82.6) no description available & (reliability: 234.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04187_69794-79189' '(at2g04030 : 1105.0) Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR.; CR88; FUNCTIONS IN: ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: mitochondrion, chloroplast stroma, plasma membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 89.1 (TAIR:AT3G07770.1); Has 8908 Blast hits to 8859 proteins in 2447 species: Archae - 4; Bacteria - 3393; Metazoa - 2086; Fungi - 314; Plants - 461; Viruses - 0; Other Eukaryotes - 2650 (source: NCBI BLink). & (gnl|cdd|35242 : 730.0) no description available & (gnl|cdd|81471 : 668.0) no description available & (p36183|enpl_horvu : 522.0) Endoplasmin homolog precursor (GRP94 homolog) - Hordeum vulgare (Barley) & (reliability: 2210.0) & (original description: Putative HSP90C, Description = Heat shock protein 90C, PFAM = PF00183;PF02518)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04216_477886-483089' '(at5g27240 : 281.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT3G04980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 562.0) & (original description: Putative At3g04960, Description = DNAJ heat shock N-terminal domain-containing protein, PFAM = PF11926;PF11926;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04220_545786-549818' '(at1g80920 : 124.0) A nuclear encoded soluble protein found in the chloroplast stroma.; J8; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, response to stress; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT3G05345.1); Has 10939 Blast hits to 10938 proteins in 2525 species: Archae - 126; Bacteria - 6057; Metazoa - 1338; Fungi - 591; Plants - 814; Viruses - 3; Other Eukaryotes - 2010 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative ATJ8, Description = Chaperone protein dnaJ 8, chloroplastic, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04276_386996-390504' '(at1g56300 : 143.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding, response to cyclopentenone; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G71000.1); Has 23532 Blast hits to 23527 proteins in 3290 species: Archae - 175; Bacteria - 9754; Metazoa - 3953; Fungi - 2136; Plants - 2298; Viruses - 10; Other Eukaryotes - 5206 (source: NCBI BLink). & (gnl|cdd|30832 : 96.8) no description available & (gnl|cdd|35931 : 81.9) no description available & (reliability: 286.0) & (original description: Putative dnaJ, Description = DnaJ homolog subfamily B member 6, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04313_110371-115747' '(at4g36990 : 241.0) encodes a protein whose sequence is similar to heat shock factors that regulate the expression of heat shock proteins. Transcript level is increased in response to heat shock. However, overexpression of this gene did not result in the increase of decrease of heat shock proteins.; heat shock factor 4 (HSF4); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to cyclopentenone, response to heat; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 2101 Blast hits to 2087 proteins in 226 species: Archae - 0; Bacteria - 2; Metazoa - 340; Fungi - 475; Plants - 774; Viruses - 0; Other Eukaryotes - 510 (source: NCBI BLink). & (gnl|cdd|84779 : 152.0) no description available & (gnl|cdd|35846 : 149.0) no description available & (reliability: 482.0) & (original description: Putative HSF24, Description = Heat shock factor protein HSF24, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04331_900088-905176' '(p35016|enpl_catro : 1181.0) Endoplasmin homolog precursor (GRP94 homolog) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g24190 : 1135.0) encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues.; SHEPHERD (SHD); FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Molecular chaperone, heat shock protein, endoplasmin (InterPro:IPR015566), ATPase-like, ATP-binding domain (InterPro:IPR003594), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: heat shock protein 90.1 (TAIR:AT5G52640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35243 : 978.0) no description available & (gnl|cdd|84591 : 678.0) no description available & (reliability: 2270.0) & (original description: Putative hspD, Description = Heat shock protein 90, PFAM = PF00183;PF02518)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04410_1044347-1050518' '(at1g74310 : 1377.0) Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature.; heat shock protein 101 (HSP101); FUNCTIONS IN: protein binding, ATPase activity, ATP binding; INVOLVED IN: response to high light intensity, response to hydrogen peroxide, response to heat, protein unfolding; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: casein lytic proteinase B2 (TAIR:AT4G14670.1); Has 27671 Blast hits to 24472 proteins in 3146 species: Archae - 360; Bacteria - 17866; Metazoa - 1124; Fungi - 430; Plants - 707; Viruses - 13; Other Eukaryotes - 7171 (source: NCBI BLink). & (q6f2y7|hs101_orysa : 1327.0) Heat shock protein 101 - Oryza sativa (Rice) & (gnl|cdd|30888 : 888.0) no description available & (gnl|cdd|36269 : 818.0) no description available & (reliability: 2754.0) & (original description: Putative CLPB1, Description = Chaperone protein ClpB1, PFAM = PF10431;PF00004;PF02861;PF02861;PF07724)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04424_381226-387588' '(at1g79920 : 1224.0) Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 91 (TAIR:AT1G79930.1); Has 26399 Blast hits to 25673 proteins in 4386 species: Archae - 152; Bacteria - 11778; Metazoa - 3903; Fungi - 1562; Plants - 1156; Viruses - 127; Other Eukaryotes - 7721 (source: NCBI BLink). & (gnl|cdd|35326 : 851.0) no description available & (gnl|cdd|84440 : 426.0) no description available & (p09189|hsp7c_pethy : 261.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 2448.0) & (original description: Putative hspa4, Description = Heat shock protein 70 family, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04432_262074-267236' '(at5g27240 : 367.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT3G04980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84624 : 80.6) no description available & (reliability: 734.0) & (original description: Putative DNAJB5, Description = DnaJ heat shock amino-terminal domain protein, PFAM = PF00226;PF11926)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04473_99484-102771' '(at2g27140 : 81.6) HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to heat; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G20970.1); Has 712 Blast hits to 708 proteins in 96 species: Archae - 0; Bacteria - 37; Metazoa - 7; Fungi - 2; Plants - 649; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative PGSC0003DMG400008714, Description = Small heat-shock protein, putative, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04490_1769-5247' '(p09189|hsp7c_pethy : 830.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at3g12580 : 795.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (gnl|cdd|35324 : 665.0) no description available & (gnl|cdd|84440 : 650.0) no description available & (reliability: 1590.0) & (original description: Putative hspB, Description = Heat shock protein 70, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04663_439870-444467' '(at5g25530 : 415.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT2G20560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30832 : 215.0) no description available & (gnl|cdd|35933 : 201.0) no description available & (q04960|dnjh_cucsa : 95.5) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 830.0) & (original description: Putative DNAJB4, Description = DnaJ homolog subfamily B member 4, PFAM = PF00226;PF01556)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04706_269890-272975' '(at2g01710 : 145.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G64360.1); Has 8537 Blast hits to 8496 proteins in 1861 species: Archae - 67; Bacteria - 3520; Metazoa - 1920; Fungi - 549; Plants - 1113; Viruses - 8; Other Eukaryotes - 1360 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative , Description = , PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04717_35521-40690' '(at3g52490 : 644.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G57710.1); Has 7668 Blast hits to 7397 proteins in 2358 species: Archae - 25; Bacteria - 6450; Metazoa - 2; Fungi - 186; Plants - 346; Viruses - 0; Other Eukaryotes - 659 (source: NCBI BLink). & (gnl|cdd|36269 : 405.0) no description available & (reliability: 1288.0) & (original description: Putative SMXL3, Description = Protein SMAX1-LIKE 3, PFAM = PF02861;PF02861)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04731_221087-232765' '(at2g18465 : 97.8) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT2G42080.1); Has 909 Blast hits to 907 proteins in 206 species: Archae - 6; Bacteria - 183; Metazoa - 307; Fungi - 24; Plants - 167; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative PGSC0003DMG400003989, Description = DNAJ heat shock N-terminal domain-containing family protein, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04738_655337-659917' '(q04960|dnjh_cucsa : 546.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (at3g44110 : 510.0) homologous to the co-chaperon DNAJ protein from E coli; DNAJ homologue 3 (ATJ3); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, response to salt stress, regulation of ATPase activity; LOCATED IN: nucleolus, cell wall, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ homologue 2 (TAIR:AT5G22060.1); Has 26521 Blast hits to 26345 proteins in 3465 species: Archae - 213; Bacteria - 10015; Metazoa - 4280; Fungi - 2432; Plants - 2547; Viruses - 88; Other Eukaryotes - 6946 (source: NCBI BLink). & (gnl|cdd|35931 : 394.0) no description available & (gnl|cdd|30832 : 310.0) no description available & (reliability: 1020.0) & (original description: Putative ddj1, Description = DnaJ homolog subfamily A member 4, PFAM = PF00684;PF01556;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04739_269463-274526' '(at5g56030 : 1046.0) A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c.; heat shock protein 81-2 (HSP81-2); CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 81.4 (TAIR:AT5G56000.1). & (p33126|hsp81_orysa : 1045.0) Heat shock protein 81-1 (HSP81-1) (Heat shock protein 82) - Oryza sativa (Rice) & (gnl|cdd|35242 : 830.0) no description available & (gnl|cdd|84591 : 760.0) no description available & (reliability: 2092.0) & (original description: Putative hspD, Description = Heat shock cognate 90 kDa protein, PFAM = PF02518;PF00183)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04785_239250-244744' '(at5g27240 : 409.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT3G04980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84624 : 83.6) no description available & (reliability: 818.0) & (original description: Putative dnaJ, Description = DnaJ heat shock amino-terminal domain protein, PFAM = PF11926;PF11926;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04886_548247-553178' '(p09189|hsp7c_pethy : 1096.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at3g12580 : 1092.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (gnl|cdd|35323 : 898.0) no description available & (gnl|cdd|84440 : 896.0) no description available & (reliability: 2184.0) & (original description: Putative hsp70, Description = 70kDa heat shock protein, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04894_99179-109522' '(at4g16660 : 1036.0) heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (Hsp 70) family protein (TAIR:AT1G11660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35327 : 566.0) no description available & (gnl|cdd|84440 : 275.0) no description available & (p09189|hsp7c_pethy : 211.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 2072.0) & (original description: Putative hsp70G, Description = Heat shock 70 kDa protein 17, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf04899_98145-103240' '(at5g62020 : 127.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor B2A (HSFB2A); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT4G11660.1); Has 2147 Blast hits to 2134 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 368; Fungi - 473; Plants - 782; Viruses - 0; Other Eukaryotes - 524 (source: NCBI BLink). & (gnl|cdd|35846 : 119.0) no description available & (gnl|cdd|84779 : 118.0) no description available & (reliability: 242.0) & (original description: Putative HSF15, Description = HSF15, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf05005_452576-457736' '(at3g52490 : 679.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G57710.1); Has 7668 Blast hits to 7397 proteins in 2358 species: Archae - 25; Bacteria - 6450; Metazoa - 2; Fungi - 186; Plants - 346; Viruses - 0; Other Eukaryotes - 659 (source: NCBI BLink). & (gnl|cdd|36269 : 438.0) no description available & (reliability: 1358.0) & (original description: Putative SMXL3, Description = Protein SMAX1-LIKE 3, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben101scf05056_84755-87845' '(at4g11660 : 253.0) member of Heat Stress Transcription Factor (Hsf) family; AT-HSFB2B; FUNCTIONS IN: transcription repressor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 32476 Blast hits to 10764 proteins in 847 species: Archae - 36; Bacteria - 10454; Metazoa - 9035; Fungi - 1651; Plants - 6330; Viruses - 666; Other Eukaryotes - 4304 (source: NCBI BLink). & (gnl|cdd|35846 : 159.0) no description available & (gnl|cdd|84779 : 146.0) no description available & (reliability: 506.0) & (original description: Putative HSFB2B, Description = Heat stress transcription factor B-2b, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf05146_455819-458460' '(at5g03030 : 135.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT2G35795.1); Has 904 Blast hits to 904 proteins in 304 species: Archae - 0; Bacteria - 188; Metazoa - 208; Fungi - 196; Plants - 87; Viruses - 5; Other Eukaryotes - 220 (source: NCBI BLink). & (gnl|cdd|35942 : 127.0) no description available & (reliability: 270.0) & (original description: Putative tim14, Description = Mitochondrial import inner membrane translocase subunit TIM14, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben101scf05147_158018-161064' '(at5g49060 : 304.0) FUNCTIONS IN: protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Protein of unknown function DUF1977, DnaJ-like (InterPro:IPR015399), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Heat shock protein DnaJ, N-terminal with domain of unknown function (DUF1977) (TAIR:AT3G57340.2); Has 23804 Blast hits to 23788 proteins in 3287 species: Archae - 182; Bacteria - 9342; Metazoa - 4208; Fungi - 2292; Plants - 2452; Viruses - 18; Other Eukaryotes - 5310 (source: NCBI BLink). & (gnl|cdd|30832 : 107.0) no description available & (gnl|cdd|35939 : 85.9) no description available & (reliability: 608.0) & (original description: Putative ATJ49, Description = Chaperone protein dnaJ 49, PFAM = PF09320;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf05222_522026-531361' '(at1g79940 : 890.0) J domain protein localized in ER membrane. Mutants have defective pollen germination.; ATERDJ2A; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion, integral to endoplasmic reticulum membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DnaJ / Sec63 Brl domains-containing protein (TAIR:AT4G21180.1). & (gnl|cdd|36169 : 353.0) no description available & (gnl|cdd|47902 : 207.0) no description available & (reliability: 1780.0) & (original description: Putative ERDJ2A, Description = DnaJ protein ERDJ2A, PFAM = PF02889;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf05336_10051-15033' '(at2g47440 : 588.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G62570.1); Has 357 Blast hits to 345 proteins in 102 species: Archae - 0; Bacteria - 6; Metazoa - 79; Fungi - 59; Plants - 180; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 1176.0) & (original description: Putative At3g62570, Description = AT3g62570/T12C14_270, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben101scf05389_7981-13552' '(p09189|hsp7c_pethy : 1069.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at5g02500 : 1065.0) encodes a member of heat shock protein 70 family.; heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cold, response to virus, response to heat; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35323 : 896.0) no description available & (gnl|cdd|84440 : 885.0) no description available & (reliability: 2130.0) & (original description: Putative hspB, Description = Heat shock protein 70, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf05389_9797-100257' '(p09189|hsp7c_pethy : 226.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at5g02500 : 224.0) encodes a member of heat shock protein 70 family.; heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cold, response to virus, response to heat; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35324 : 181.0) no description available & (gnl|cdd|84440 : 163.0) no description available & (reliability: 448.0) & (original description: Putative hsc1, Description = Heat shock protein 70, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf05484_254610-263975' '(at1g79030 : 755.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G16680.1); Has 17828 Blast hits to 17824 proteins in 3062 species: Archae - 123; Bacteria - 7609; Metazoa - 2994; Fungi - 1488; Plants - 1684; Viruses - 8; Other Eukaryotes - 3922 (source: NCBI BLink). & (gnl|cdd|35939 : 392.0) no description available & (gnl|cdd|84624 : 84.0) no description available & (reliability: 1510.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF14901;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf05506_670687-675510' '(at3g12580 : 464.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (p29357|hsp7e_spiol : 459.0) Chloroplast envelope membrane 70 kDa heat shock-related protein - Spinacia oleracea (Spinach) & (gnl|cdd|35323 : 412.0) no description available & (gnl|cdd|84440 : 378.0) no description available & (reliability: 928.0) & (original description: Putative hspB, Description = Heat shock protein 70, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf05596_50625-78353' '(at1g28210 : 464.0) DnaJ homolog AtJ1 (atj); ATJ1; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, zinc ion binding, nucleic acid binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Zinc finger, CCHC-type (InterPro:IPR001878), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: gametophytic factor 2 (TAIR:AT5G48030.1); Has 28171 Blast hits to 27206 proteins in 3463 species: Archae - 195; Bacteria - 10792; Metazoa - 4387; Fungi - 2267; Plants - 2533; Viruses - 17; Other Eukaryotes - 7980 (source: NCBI BLink). & (gnl|cdd|30832 : 362.0) no description available & (gnl|cdd|35934 : 212.0) no description available & (q04960|dnjh_cucsa : 137.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 928.0) & (original description: Putative ATJ1, Description = Chaperone protein dnaJ 1, mitochondrial, PFAM = PF01556;PF00684;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf05690_110689-120775' '(at4g39150 : 405.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G21510.1). & (gnl|cdd|35910 : 215.0) no description available & (gnl|cdd|30832 : 102.0) no description available & (reliability: 810.0) & (original description: Putative Os01g0702450, Description = Os01g0702450 protein, PFAM = PF00226;PF14308)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf05948_431223-434917' '(at2g26150 : 140.0) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.; heat shock transcription factor A2 (HSFA2); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84779 : 127.0) no description available & (gnl|cdd|35846 : 121.0) no description available & (reliability: 280.0) & (original description: Putative HSF1, Description = Heat stress transcription factor A-2, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf06080_398749-419277' '(at5g48030 : 498.0) encodes a mitochondrially targeted DNAJ protein involved in female gametophyte development.; gametophytic factor 2 (GFA2); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: in 7 processes; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT1G28210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30832 : 369.0) no description available & (gnl|cdd|35934 : 215.0) no description available & (q04960|dnjh_cucsa : 146.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 996.0) & (original description: Putative GFA2, Description = Chaperone protein dnaJ GFA2, mitochondrial, PFAM = PF01556;PF00226;PF00684)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf06091_617973-642437' '(at1g80030 : 551.0) Molecular chaperone Hsp40/DnaJ family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Chaperone DnaJ (InterPro:IPR012724), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT3G17830.1); Has 29578 Blast hits to 28478 proteins in 3517 species: Archae - 197; Bacteria - 11603; Metazoa - 4491; Fungi - 2484; Plants - 2799; Viruses - 20; Other Eukaryotes - 7984 (source: NCBI BLink). & (gnl|cdd|30832 : 381.0) no description available & (gnl|cdd|35934 : 208.0) no description available & (q04960|dnjh_cucsa : 131.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 1102.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF01556;PF00684;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf06113_388339-397349' '(at1g61770 : 394.0) J domain protein.; Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G18140.1); Has 22399 Blast hits to 22393 proteins in 3184 species: Archae - 166; Bacteria - 8830; Metazoa - 4267; Fungi - 2142; Plants - 2270; Viruses - 12; Other Eukaryotes - 4712 (source: NCBI BLink). & (gnl|cdd|35941 : 300.0) no description available & (gnl|cdd|30832 : 95.3) no description available & (reliability: 788.0) & (original description: Putative C50, Description = Chaperone protein dnaJ 50, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf06123_80333-87980' '(at5g03160 : 539.0) J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast.; homolog of mamallian P58IPK (P58IPK); FUNCTIONS IN: heat shock protein binding, binding; INVOLVED IN: protein folding; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum lumen; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT2G20560.1); Has 32693 Blast hits to 30813 proteins in 3428 species: Archae - 634; Bacteria - 13349; Metazoa - 5479; Fungi - 2550; Plants - 3479; Viruses - 15; Other Eukaryotes - 7187 (source: NCBI BLink). & (gnl|cdd|35770 : 415.0) no description available & (gnl|cdd|30832 : 139.0) no description available & (reliability: 1078.0) & (original description: Putative P58IPK, Description = DnaJ protein P58IPK homolog, PFAM = PF13432;PF13432;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf06171_198155-208155' '(at4g36520 : 189.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G12770.2); Has 187564 Blast hits to 104912 proteins in 3501 species: Archae - 1251; Bacteria - 31029; Metazoa - 79517; Fungi - 15919; Plants - 9547; Viruses - 688; Other Eukaryotes - 49613 (source: NCBI BLink). & (gnl|cdd|35652 : 159.0) no description available & (reliability: 376.0) & (original description: Putative AUL1, Description = Auxilin-related protein 2, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben101scf06218_297090-299572' '(at2g17880 : 90.9) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G36040.1); Has 19677 Blast hits to 19677 proteins in 3133 species: Archae - 135; Bacteria - 8632; Metazoa - 3284; Fungi - 1660; Plants - 1836; Viruses - 5; Other Eukaryotes - 4125 (source: NCBI BLink). & (gnl|cdd|30832 : 86.8) no description available & (reliability: 181.8) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf06436_451785-457098' '(q04960|dnjh_cucsa : 503.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (at3g44110 : 479.0) homologous to the co-chaperon DNAJ protein from E coli; DNAJ homologue 3 (ATJ3); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, response to salt stress, regulation of ATPase activity; LOCATED IN: nucleolus, cell wall, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ homologue 2 (TAIR:AT5G22060.1); Has 26521 Blast hits to 26345 proteins in 3465 species: Archae - 213; Bacteria - 10015; Metazoa - 4280; Fungi - 2432; Plants - 2547; Viruses - 88; Other Eukaryotes - 6946 (source: NCBI BLink). & (gnl|cdd|35931 : 372.0) no description available & (gnl|cdd|30832 : 284.0) no description available & (reliability: 958.0) & (original description: Putative msj1, Description = DnaJ-like protein, PFAM = PF01556;PF00226;PF00684)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf06501_318143-321858' '(at2g32120 : 859.0) heat-shock protein 70T-2 (HSP70T-2); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to high light intensity, response to hydrogen peroxide, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (TAIR:AT3G12580.1); Has 23745 Blast hits to 23668 proteins in 4473 species: Archae - 147; Bacteria - 10488; Metazoa - 3198; Fungi - 1451; Plants - 1078; Viruses - 114; Other Eukaryotes - 7269 (source: NCBI BLink). & (gnl|cdd|35324 : 383.0) no description available & (gnl|cdd|84440 : 327.0) no description available & (p09189|hsp7c_pethy : 308.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 1718.0) & (original description: Putative HSP70-8, Description = Heat shock 70 kDa protein 8, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf06684_100879-105522' '(p51819|hsp83_iponi : 1111.0) Heat shock protein 83 - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (at5g52640 : 1090.0) Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance.; heat shock protein 90.1 (HSP90.1); FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: defense response to bacterium, response to heat, response to arsenic; LOCATED IN: cytosol, cell wall, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 81.4 (TAIR:AT5G56000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35242 : 842.0) no description available & (gnl|cdd|84591 : 750.0) no description available & (reliability: 2180.0) & (original description: Putative HSP83A, Description = Heat shock protein 83, PFAM = PF02518;PF00183)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf06698_388794-402194' '(at1g21080 : 541.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT1G76700.1). & (gnl|cdd|35910 : 246.0) no description available & (gnl|cdd|30832 : 102.0) no description available & (reliability: 1082.0) & (original description: Putative ATJ10, Description = Chaperone protein dnaJ 10, PFAM = PF00226;PF14308)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf06793_322988-328651' '(at5g21430 : 145.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; LOCATED IN: chloroplast thylakoid membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); Has 33 Blast hits to 33 proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative ndhU, Description = NAD(P)H-quinone oxidoreductase subunit U, chloroplastic, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf06829_264818-266750' '(at5g27240 : 152.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT3G04980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative PGSC0003DMG400021290, Description = DnaJ heat shock amino-terminal domain protein, PFAM = PF11926)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf06902_11303-16129' '(at5g23590 : 266.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, nucleic acid binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), RNA recognition motif, RNP-1 (InterPro:IPR000504), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: ARG1-like 2 (TAIR:AT1G59980.1); Has 16747 Blast hits to 16541 proteins in 2695 species: Archae - 126; Bacteria - 6883; Metazoa - 3195; Fungi - 1541; Plants - 1234; Viruses - 13; Other Eukaryotes - 3755 (source: NCBI BLink). & (gnl|cdd|35910 : 115.0) no description available & (reliability: 532.0) & (original description: Putative At5g23590, Description = At5g23590, PFAM = PF00226;PF00076)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf07019_20836-23375' '(at2g17880 : 113.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G36040.1); Has 19677 Blast hits to 19677 proteins in 3133 species: Archae - 135; Bacteria - 8632; Metazoa - 3284; Fungi - 1660; Plants - 1836; Viruses - 5; Other Eukaryotes - 4125 (source: NCBI BLink). & (gnl|cdd|30832 : 86.0) no description available & (gnl|cdd|35932 : 82.0) no description available & (reliability: 226.0) & (original description: Putative ATJ11, Description = Chaperone protein dnaJ 11, chloroplastic, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf07121_49217-58769' '(at2g42080 : 120.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT3G58020.1); Has 1438 Blast hits to 1435 proteins in 312 species: Archae - 0; Bacteria - 313; Metazoa - 345; Fungi - 73; Plants - 359; Viruses - 0; Other Eukaryotes - 348 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative At2g42080, Description = DNAJ heat shock N-terminal domain-containing protein, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf07184_296293-303408' '(at5g49580 : 489.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G16680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35939 : 305.0) no description available & (gnl|cdd|84624 : 89.4) no description available & (reliability: 978.0) & (original description: Putative At5g49580, Description = Chaperone DnaJ-domain containing protein, PFAM = PF14901;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf07321_99014-101547' '(p30236|hsp41_soybn : 139.0) 22.0 kDa class IV heat shock protein precursor - Glycine max (Soybean) & (at4g10250 : 138.0) Columbia endomembrane-localized small heat shock protein; ATHSP22.0; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to heat; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G07400.1); Has 7552 Blast hits to 7552 proteins in 1747 species: Archae - 200; Bacteria - 4479; Metazoa - 74; Fungi - 263; Plants - 1560; Viruses - 4; Other Eukaryotes - 972 (source: NCBI BLink). & (gnl|cdd|84439 : 108.0) no description available & (gnl|cdd|35929 : 102.0) no description available & (reliability: 276.0) & (original description: Putative shsp, Description = 22.0 kDa class IV heat shock protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf07391_489626-492589' '(at4g11660 : 108.0) member of Heat Stress Transcription Factor (Hsf) family; AT-HSFB2B; FUNCTIONS IN: transcription repressor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 32476 Blast hits to 10764 proteins in 847 species: Archae - 36; Bacteria - 10454; Metazoa - 9035; Fungi - 1651; Plants - 6330; Viruses - 666; Other Eukaryotes - 4304 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative HSFB2, Description = Heat shock transcription factor, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben101scf07475_22945-29036' '(at1g77020 : 530.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT1G76700.1); Has 22982 Blast hits to 22863 proteins in 3207 species: Archae - 174; Bacteria - 9243; Metazoa - 3904; Fungi - 2258; Plants - 2332; Viruses - 18; Other Eukaryotes - 5053 (source: NCBI BLink). & (gnl|cdd|35910 : 209.0) no description available & (gnl|cdd|30832 : 101.0) no description available & (reliability: 1060.0) & (original description: Putative At1g77020, Description = DNAJ heat shock N-terminal domain-containing protein, PFAM = PF00226;PF14308)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf07509_152256-155556' '(at4g18880 : 279.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A4A (HSF A4A); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT5G45710.1); Has 2263 Blast hits to 2244 proteins in 239 species: Archae - 2; Bacteria - 4; Metazoa - 360; Fungi - 491; Plants - 856; Viruses - 0; Other Eukaryotes - 550 (source: NCBI BLink). & (gnl|cdd|35846 : 168.0) no description available & (gnl|cdd|84779 : 163.0) no description available & (reliability: 558.0) & (original description: Putative HSFA4A, Description = Heat stress transcription factor A-4a, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf07585_54810-60828' '(at2g22360 : 583.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Chaperone DnaJ (InterPro:IPR012724), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT4G39960.1); Has 29493 Blast hits to 29023 proteins in 3518 species: Archae - 206; Bacteria - 11054; Metazoa - 4574; Fungi - 2545; Plants - 2863; Viruses - 57; Other Eukaryotes - 8194 (source: NCBI BLink). & (gnl|cdd|30832 : 426.0) no description available & (gnl|cdd|35934 : 244.0) no description available & (q04960|dnjh_cucsa : 136.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 1166.0) & (original description: Putative DJA6, Description = Chaperone protein dnaJ A6, chloroplastic, PFAM = PF00684;PF00226;PF01556)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf07722_86119-90158' '(at5g23240 : 432.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G42750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35935 : 154.0) no description available & (reliability: 864.0) & (original description: Putative At5g23240, Description = At5g23240, PFAM = PF13370;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf07786_57813-71642' '(at2g22360 : 578.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Chaperone DnaJ (InterPro:IPR012724), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT4G39960.1); Has 29493 Blast hits to 29023 proteins in 3518 species: Archae - 206; Bacteria - 11054; Metazoa - 4574; Fungi - 2545; Plants - 2863; Viruses - 57; Other Eukaryotes - 8194 (source: NCBI BLink). & (gnl|cdd|30832 : 411.0) no description available & (gnl|cdd|35934 : 239.0) no description available & (q04960|dnjh_cucsa : 141.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 1156.0) & (original description: Putative DJA6, Description = Chaperone protein dnaJ A6, chloroplastic, PFAM = PF00684;PF01556;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf07790_395182-397767' '(at4g21870 : 121.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 2331 Blast hits to 2331 proteins in 523 species: Archae - 47; Bacteria - 802; Metazoa - 2; Fungi - 44; Plants - 1239; Viruses - 0; Other Eukaryotes - 197 (source: NCBI BLink). & (p04793|hsp13_soybn : 83.6) 17.5 kDa class I heat shock protein (HSP 17.5-M) - Glycine max (Soybean) & (reliability: 242.0) & (original description: Putative HSP15.4, Description = 15.4 kDa class V heat shock protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf07875_59378-63969' '(at1g59725 : 355.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT1G10350.1); Has 28155 Blast hits to 27844 proteins in 3478 species: Archae - 176; Bacteria - 10528; Metazoa - 4629; Fungi - 2607; Plants - 2835; Viruses - 20; Other Eukaryotes - 7360 (source: NCBI BLink). & (gnl|cdd|30832 : 187.0) no description available & (gnl|cdd|35931 : 177.0) no description available & (q04960|dnjh_cucsa : 96.7) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 710.0) & (original description: Putative hsp40, Description = DNAJ heat shock family protein, PFAM = PF01556;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf08030_245216-248538' '(at5g20970 : 85.9) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT2G27140.1); Has 958 Blast hits to 958 proteins in 129 species: Archae - 8; Bacteria - 64; Metazoa - 1; Fungi - 0; Plants - 877; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative PGSC0003DMG400008714, Description = Small heat-shock protein, putative, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf08149_58066-66518' '(at5g16820 : 345.0) Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes.; heat shock factor 3 (HSF3); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1E (TAIR:AT3G02990.1); Has 2455 Blast hits to 2420 proteins in 254 species: Archae - 0; Bacteria - 23; Metazoa - 373; Fungi - 496; Plants - 855; Viruses - 0; Other Eukaryotes - 708 (source: NCBI BLink). & (gnl|cdd|35846 : 205.0) no description available & (gnl|cdd|84779 : 198.0) no description available & (reliability: 690.0) & (original description: Putative HSFA1, Description = Heat stress transcription factor A-1, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf08182_281770-284264' '(at3g13310 : 96.7) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT2G17880.1); Has 19059 Blast hits to 19056 proteins in 3143 species: Archae - 142; Bacteria - 8678; Metazoa - 3049; Fungi - 1540; Plants - 1805; Viruses - 5; Other Eukaryotes - 3840 (source: NCBI BLink). & (gnl|cdd|30832 : 81.0) no description available & (reliability: 193.4) & (original description: Putative At3g13310, Description = At3g13310, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf08182_290515-293015' '(at3g13310 : 102.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT2G17880.1); Has 19059 Blast hits to 19056 proteins in 3143 species: Archae - 142; Bacteria - 8678; Metazoa - 3049; Fungi - 1540; Plants - 1805; Viruses - 5; Other Eukaryotes - 3840 (source: NCBI BLink). & (gnl|cdd|30832 : 90.7) no description available & (reliability: 204.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf08206_90799-93847' '(p30222|hs22c_pethy : 301.0) Small heat shock protein, chloroplast precursor - Petunia hybrida (Petunia) & (at4g27670 : 201.0) chloroplast located small heat shock protein.; heat shock protein 21 (HSP21); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G51440.1); Has 6158 Blast hits to 6158 proteins in 1414 species: Archae - 225; Bacteria - 3528; Metazoa - 23; Fungi - 170; Plants - 1466; Viruses - 0; Other Eukaryotes - 746 (source: NCBI BLink). & (gnl|cdd|84439 : 116.0) no description available & (gnl|cdd|35929 : 97.5) no description available & (reliability: 402.0) & (original description: Putative HSP22, Description = Small heat shock protein, chloroplastic, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf08249_333573-342439' '(at5g59610 : 193.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT4G39960.1); Has 23649 Blast hits to 23644 proteins in 3244 species: Archae - 193; Bacteria - 9673; Metazoa - 3994; Fungi - 2050; Plants - 2390; Viruses - 23; Other Eukaryotes - 5326 (source: NCBI BLink). & (gnl|cdd|30832 : 94.5) no description available & (gnl|cdd|35934 : 81.3) no description available & (reliability: 386.0) & (original description: Putative DJC73, Description = DnaJ, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf08338_195730-223380' '(at1g11660 : 970.0) heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT1G79920.1); Has 25020 Blast hits to 24886 proteins in 4391 species: Archae - 151; Bacteria - 11311; Metazoa - 3542; Fungi - 1480; Plants - 1013; Viruses - 97; Other Eukaryotes - 7426 (source: NCBI BLink). & (gnl|cdd|35326 : 756.0) no description available & (gnl|cdd|84440 : 440.0) no description available & (p09189|hsp7c_pethy : 269.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 1940.0) & (original description: Putative hsp70E, Description = Heat shock protein 70 family, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf08390_283105-285683' '(p30236|hsp41_soybn : 141.0) 22.0 kDa class IV heat shock protein precursor - Glycine max (Soybean) & (at4g10250 : 134.0) Columbia endomembrane-localized small heat shock protein; ATHSP22.0; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to heat; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G07400.1); Has 7552 Blast hits to 7552 proteins in 1747 species: Archae - 200; Bacteria - 4479; Metazoa - 74; Fungi - 263; Plants - 1560; Viruses - 4; Other Eukaryotes - 972 (source: NCBI BLink). & (gnl|cdd|84439 : 109.0) no description available & (gnl|cdd|35929 : 100.0) no description available & (reliability: 268.0) & (original description: Putative shsp, Description = 22.0 kDa class IV heat shock protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf08549_29297-31283' '(at5g59720 : 156.0) encodes a low molecular weight heat shock protein that contains the heat shock element in the promoter region. Expression is induced in response to heat shock.; heat shock protein 18.2 (HSP18.2); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p31673|hsp21_orysa : 147.0) 17.4 kDa class I heat shock protein 1 - Oryza sativa (Rice) & (gnl|cdd|84439 : 109.0) no description available & (gnl|cdd|35929 : 104.0) no description available & (reliability: 312.0) & (original description: Putative hsp17, Description = 17.5 kd heat shock family protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf08549_75786-86116' '(at5g59720 : 183.0) encodes a low molecular weight heat shock protein that contains the heat shock element in the promoter region. Expression is induced in response to heat shock.; heat shock protein 18.2 (HSP18.2); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p27880|hsp12_medsa : 182.0) 18.2 kDa class I heat shock protein - Medicago sativa (Alfalfa) & (gnl|cdd|84439 : 109.0) no description available & (gnl|cdd|35929 : 105.0) no description available & (reliability: 366.0) & (original description: Putative hsp2, Description = 17.5 kd heat shock family protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf08580_49579-53088' '(at2g35795 : 140.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT3G09700.1); Has 912 Blast hits to 912 proteins in 301 species: Archae - 0; Bacteria - 183; Metazoa - 207; Fungi - 194; Plants - 95; Viruses - 5; Other Eukaryotes - 228 (source: NCBI BLink). & (gnl|cdd|35942 : 137.0) no description available & (reliability: 280.0) & (original description: Putative pam18, Description = Mitochondrial import inner membrane translocase subunit TIM14, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben101scf08590_10541-15904' '(q03685|bip5_tobac : 1123.0) Luminal-binding protein 5 precursor (BiP 5) (78 kDa glucose-regulated protein homolog 5) (GRP 78-5) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35323 : 1078.0) no description available & (at5g42020 : 1051.0) Luminal binding protein (BiP2) involved in polar nuclei fusion during proliferation of endosperm nuclei.; luminal binding protein (BIP); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cadmium ion, response to heat, polar nucleus fusion, response to endoplasmic reticulum stress; LOCATED IN: in 8 components; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G28540.1); Has 34912 Blast hits to 34423 proteins in 4667 species: Archae - 159; Bacteria - 17150; Metazoa - 3676; Fungi - 1797; Plants - 1301; Viruses - 340; Other Eukaryotes - 10489 (source: NCBI BLink). & (gnl|cdd|84440 : 853.0) no description available & (reliability: 2102.0) & (original description: Putative HSC70, Description = Luminal-binding protein, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf08606_96254-100416' '(at5g64360 : 167.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G09540.1); Has 2668 Blast hits to 2652 proteins in 821 species: Archae - 47; Bacteria - 1266; Metazoa - 509; Fungi - 114; Plants - 564; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative At5g64360, Description = AT5G64360 protein, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf08621_333564-336154' '(p30236|hsp41_soybn : 153.0) 22.0 kDa class IV heat shock protein precursor - Glycine max (Soybean) & (at4g10250 : 140.0) Columbia endomembrane-localized small heat shock protein; ATHSP22.0; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to heat; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G07400.1); Has 7552 Blast hits to 7552 proteins in 1747 species: Archae - 200; Bacteria - 4479; Metazoa - 74; Fungi - 263; Plants - 1560; Viruses - 4; Other Eukaryotes - 972 (source: NCBI BLink). & (gnl|cdd|84439 : 95.3) no description available & (reliability: 280.0) & (original description: Putative sHSP22.7, Description = 22.7 kDa class IV heat shock protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf08680_173702-182144' '(at5g15450 : 1485.0) Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype.; casein lytic proteinase B3 (CLPB3); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: chloroplast organization, response to heat; LOCATED IN: plastid stroma, chloroplast, chloroplast stroma; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpB (InterPro:IPR017730), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: casein lytic proteinase B4 (TAIR:AT2G25140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30888 : 954.0) no description available & (gnl|cdd|36269 : 853.0) no description available & (q6f2y7|hs101_orysa : 763.0) Heat shock protein 101 - Oryza sativa (Rice) & (reliability: 2970.0) & (original description: Putative CLPB3, Description = Chaperone protein ClpB3, chloroplastic, PFAM = PF02861;PF02861;PF00004;PF07724;PF10431)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf08683_5837-8850' '(at1g54050 : 133.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 4491 Blast hits to 4491 proteins in 1181 species: Archae - 166; Bacteria - 2520; Metazoa - 2; Fungi - 140; Plants - 1242; Viruses - 0; Other Eukaryotes - 421 (source: NCBI BLink). & (p05477|hsp21_soybn : 94.7) 17.9 kDa class II heat shock protein - Glycine max (Soybean) & (gnl|cdd|35929 : 84.4) no description available & (gnl|cdd|84439 : 84.1) no description available & (reliability: 266.0) & (original description: Putative hsp2, Description = 17.2 kDa class II heat shock protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf08804_291695-301940' '(at3g17830 : 406.0) Molecular chaperone Hsp40/DnaJ family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Chaperone DnaJ (InterPro:IPR012724), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT1G80030.2); Has 28823 Blast hits to 28018 proteins in 3494 species: Archae - 196; Bacteria - 10926; Metazoa - 4489; Fungi - 2504; Plants - 2754; Viruses - 18; Other Eukaryotes - 7936 (source: NCBI BLink). & (gnl|cdd|30832 : 346.0) no description available & (gnl|cdd|35934 : 202.0) no description available & (q04960|dnjh_cucsa : 108.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 812.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF00684;PF00226;PF01556)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf08806_120339-132738' '(p09886|hs21c_pea : 145.0) Small heat shock protein, chloroplast precursor - Pisum sativum (Garden pea) & (at4g27670 : 136.0) chloroplast located small heat shock protein.; heat shock protein 21 (HSP21); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G51440.1); Has 6158 Blast hits to 6158 proteins in 1414 species: Archae - 225; Bacteria - 3528; Metazoa - 23; Fungi - 170; Plants - 1466; Viruses - 0; Other Eukaryotes - 746 (source: NCBI BLink). & (gnl|cdd|29382 : 89.5) no description available & (reliability: 272.0) & (original description: Putative cpsHSP, Description = Chloroplast small heat shock protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf09262_128148-131194' '(at1g53540 : 189.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.4 (TAIR:AT3G46230.1); Has 7090 Blast hits to 7089 proteins in 1610 species: Archae - 175; Bacteria - 4287; Metazoa - 66; Fungi - 302; Plants - 1606; Viruses - 0; Other Eukaryotes - 654 (source: NCBI BLink). & (p05478|hsp16_soybn : 186.0) 18.5 kDa class I heat shock protein (HSP 18.5) - Glycine max (Soybean) & (gnl|cdd|84439 : 118.0) no description available & (gnl|cdd|35929 : 114.0) no description available & (reliability: 378.0) & (original description: Putative hsp2, Description = 17.5 kd heat shock family protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf09345_64527-67057' '(at2g17880 : 112.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G36040.1); Has 19677 Blast hits to 19677 proteins in 3133 species: Archae - 135; Bacteria - 8632; Metazoa - 3284; Fungi - 1660; Plants - 1836; Viruses - 5; Other Eukaryotes - 4125 (source: NCBI BLink). & (gnl|cdd|30832 : 86.0) no description available & (reliability: 224.0) & (original description: Putative ATJ11, Description = Chaperone protein dnaJ 11, chloroplastic, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf09471_38020-40445' '(p04795|hsp15_soybn : 137.0) 17.6 kDa class I heat shock protein (HSP 17.6-L) - Glycine max (Soybean) & (at2g29500 : 130.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G07400.1); Has 6873 Blast hits to 6873 proteins in 1575 species: Archae - 184; Bacteria - 4083; Metazoa - 80; Fungi - 309; Plants - 1622; Viruses - 0; Other Eukaryotes - 595 (source: NCBI BLink). & (gnl|cdd|84439 : 94.9) no description available & (gnl|cdd|35929 : 91.7) no description available & (reliability: 260.0) & (original description: Putative hsp17, Description = 17.5 kd heat shock family protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf09552_125649-131214' '(q02028|hsp7s_pea : 1038.0) Stromal 70 kDa heat shock-related protein, chloroplast precursor - Pisum sativum (Garden pea) & (at4g24280 : 1015.0) Involved in protein import into chloroplasts during early developmental stages.; chloroplast heat shock protein 70-1 (cpHsc70-1); FUNCTIONS IN: protein binding, ATP binding; INVOLVED IN: protein folding, response to cadmium ion, protein targeting to chloroplast, response to cold; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Chaperone DnaK (InterPro:IPR012725), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: chloroplast heat shock protein 70-2 (TAIR:AT5G49910.1); Has 36155 Blast hits to 36031 proteins in 4857 species: Archae - 160; Bacteria - 17964; Metazoa - 3544; Fungi - 1694; Plants - 1235; Viruses - 354; Other Eukaryotes - 11204 (source: NCBI BLink). & (gnl|cdd|80608 : 983.0) no description available & (gnl|cdd|35325 : 829.0) no description available & (reliability: 2030.0) & (original description: Putative HSP70, Description = Stromal 70 kDa heat shock-related protein, chloroplastic, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf09554_197090-210764' '(at5g15450 : 1481.0) Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype.; casein lytic proteinase B3 (CLPB3); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: chloroplast organization, response to heat; LOCATED IN: plastid stroma, chloroplast, chloroplast stroma; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpB (InterPro:IPR017730), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: casein lytic proteinase B4 (TAIR:AT2G25140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30888 : 951.0) no description available & (gnl|cdd|36269 : 848.0) no description available & (q6f2y7|hs101_orysa : 756.0) Heat shock protein 101 - Oryza sativa (Rice) & (reliability: 2962.0) & (original description: Putative CLPB3, Description = Chaperone protein ClpB3, chloroplastic, PFAM = PF00004;PF10431;PF07724;PF02861;PF02861)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf09649_281479-284576' '(at1g53540 : 126.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.4 (TAIR:AT3G46230.1); Has 7090 Blast hits to 7089 proteins in 1610 species: Archae - 175; Bacteria - 4287; Metazoa - 66; Fungi - 302; Plants - 1606; Viruses - 0; Other Eukaryotes - 654 (source: NCBI BLink). & (q84q77|hsp23_orysa : 114.0) 17.4 kDa class I heat shock protein 3 - Oryza sativa (Rice) & (gnl|cdd|35929 : 113.0) no description available & (gnl|cdd|84439 : 111.0) no description available & (reliability: 252.0) & (original description: Putative hsp17, Description = 17.5 kd heat shock family protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf09774_201267-206685' '(at2g20560 : 370.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT4G28480.1); Has 27936 Blast hits to 27733 proteins in 3449 species: Archae - 187; Bacteria - 10270; Metazoa - 4781; Fungi - 2609; Plants - 2869; Viruses - 17; Other Eukaryotes - 7203 (source: NCBI BLink). & (gnl|cdd|30832 : 221.0) no description available & (gnl|cdd|35933 : 212.0) no description available & (q04960|dnjh_cucsa : 93.6) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 740.0) & (original description: Putative v1g233916, Description = Predicted protein, PFAM = PF01556;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf09928_108522-110025' '(p09189|hsp7c_pethy : 180.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at1g16030 : 176.0) heat shock protein 70B (Hsp70b); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: cytosol, cell wall, plasma membrane, chloroplast, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (TAIR:AT3G12580.1); Has 33913 Blast hits to 33562 proteins in 4835 species: Archae - 164; Bacteria - 16454; Metazoa - 3784; Fungi - 1785; Plants - 1262; Viruses - 309; Other Eukaryotes - 10155 (source: NCBI BLink). & (gnl|cdd|35323 : 146.0) no description available & (gnl|cdd|84440 : 101.0) no description available & (reliability: 352.0) & (original description: Putative Hsp70, Description = Heat shock protein 70, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf09928_110026-111838' '(p26413|hsp70_soybn : 424.0) Heat shock 70 kDa protein - Glycine max (Soybean) & (at3g12580 : 422.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (gnl|cdd|84440 : 394.0) no description available & (gnl|cdd|35324 : 385.0) no description available & (reliability: 844.0) & (original description: Putative hspB, Description = Heat shock protein 70, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf09973_22124-26138' '(p04793|hsp13_soybn : 189.0) 17.5 kDa class I heat shock protein (HSP 17.5-M) - Glycine max (Soybean) & (at1g07400 : 179.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G59860.1); Has 7238 Blast hits to 7237 proteins in 1623 species: Archae - 225; Bacteria - 4290; Metazoa - 129; Fungi - 318; Plants - 1626; Viruses - 0; Other Eukaryotes - 650 (source: NCBI BLink). & (gnl|cdd|84439 : 113.0) no description available & (gnl|cdd|35929 : 109.0) no description available & (reliability: 358.0) & (original description: Putative Hsp3, Description = Heat shock protein 3, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf09973_51080-53538' '(p02519|hsp11_soybn : 201.0) 17.3 kDa class I heat shock protein (HSP 17.3) - Glycine max (Soybean) & (at1g07400 : 184.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G59860.1); Has 7238 Blast hits to 7237 proteins in 1623 species: Archae - 225; Bacteria - 4290; Metazoa - 129; Fungi - 318; Plants - 1626; Viruses - 0; Other Eukaryotes - 650 (source: NCBI BLink). & (gnl|cdd|84439 : 115.0) no description available & (gnl|cdd|35929 : 111.0) no description available & (reliability: 368.0) & (original description: Putative hsp2, Description = 17.5 kd heat shock family protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf09973_59077-61553' '(p27880|hsp12_medsa : 187.0) 18.2 kDa class I heat shock protein - Medicago sativa (Alfalfa) & (at3g46230 : 178.0) member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seeds; heat shock protein 17.4 (HSP17.4); INVOLVED IN: response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 7056 Blast hits to 7055 proteins in 1590 species: Archae - 177; Bacteria - 4281; Metazoa - 88; Fungi - 291; Plants - 1609; Viruses - 0; Other Eukaryotes - 610 (source: NCBI BLink). & (gnl|cdd|35929 : 115.0) no description available & (gnl|cdd|84439 : 105.0) no description available & (reliability: 356.0) & (original description: Putative hsp17, Description = 17.5 kd heat shock family protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf10036_41080-64608' '(at1g79920 : 335.0) Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 91 (TAIR:AT1G79930.1); Has 26399 Blast hits to 25673 proteins in 4386 species: Archae - 152; Bacteria - 11778; Metazoa - 3903; Fungi - 1562; Plants - 1156; Viruses - 127; Other Eukaryotes - 7721 (source: NCBI BLink). & (gnl|cdd|35326 : 274.0) no description available & (gnl|cdd|84440 : 210.0) no description available & (p09189|hsp7c_pethy : 147.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 670.0) & (original description: Putative hspH, Description = 97 kDa heat shock protein, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf10036_66360-69204' '(at1g79920 : 168.0) Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 91 (TAIR:AT1G79930.1); Has 26399 Blast hits to 25673 proteins in 4386 species: Archae - 152; Bacteria - 11778; Metazoa - 3903; Fungi - 1562; Plants - 1156; Viruses - 127; Other Eukaryotes - 7721 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative HSP70, Description = Heat shock 70 kDa protein 14, PFAM = )' T '20.2.1' 'stress.abiotic.heat' 'niben101scf10144_114937-119313' '(at3g05345 : 295.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G23240.1); Has 10844 Blast hits to 10844 proteins in 2367 species: Archae - 96; Bacteria - 5912; Metazoa - 1330; Fungi - 441; Plants - 721; Viruses - 3; Other Eukaryotes - 2341 (source: NCBI BLink). & (reliability: 590.0) & (original description: Putative At3g05345, Description = DnaJ domain-containing protein, PFAM = PF00226;PF13459)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf10384_22813-25271' '(p04793|hsp13_soybn : 206.0) 17.5 kDa class I heat shock protein (HSP 17.5-M) - Glycine max (Soybean) & (at1g07400 : 184.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G59860.1); Has 7238 Blast hits to 7237 proteins in 1623 species: Archae - 225; Bacteria - 4290; Metazoa - 129; Fungi - 318; Plants - 1626; Viruses - 0; Other Eukaryotes - 650 (source: NCBI BLink). & (gnl|cdd|84439 : 114.0) no description available & (gnl|cdd|35929 : 109.0) no description available & (reliability: 368.0) & (original description: Putative hsp2, Description = 17.5 kd heat shock family protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf10502_230796-235021' '(at5g53150 : 422.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G05230.1); Has 19161 Blast hits to 18960 proteins in 3050 species: Archae - 127; Bacteria - 8115; Metazoa - 3268; Fungi - 1518; Plants - 2179; Viruses - 8; Other Eukaryotes - 3946 (source: NCBI BLink). & (gnl|cdd|84624 : 84.4) no description available & (reliability: 844.0) & (original description: Putative hsp40, Description = DnaJ subfamily B member, PFAM = PF11926;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf10528_59752-63920' '(at1g11040 : 220.0) HSP40/DnaJ peptide-binding protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: HSP40/DnaJ peptide-binding protein (TAIR:AT1G44160.1); Has 19507 Blast hits to 13358 proteins in 2831 species: Archae - 102; Bacteria - 8184; Metazoa - 2012; Fungi - 1146; Plants - 786; Viruses - 38; Other Eukaryotes - 7239 (source: NCBI BLink). & (gnl|cdd|30832 : 99.0) no description available & (gnl|cdd|35931 : 97.7) no description available & (reliability: 440.0) & (original description: Putative hsp40, Description = DnaJ homolog subfamily B member 13, PFAM = PF01556)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf10796_49317-54952' '(at5g56030 : 1048.0) A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c.; heat shock protein 81-2 (HSP81-2); CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 81.4 (TAIR:AT5G56000.1). & (p33126|hsp81_orysa : 1044.0) Heat shock protein 81-1 (HSP81-1) (Heat shock protein 82) - Oryza sativa (Rice) & (gnl|cdd|35242 : 831.0) no description available & (gnl|cdd|84591 : 766.0) no description available & (reliability: 2096.0) & (original description: Putative hspD, Description = Heat shock protein 90, PFAM = PF02518;PF00183)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf11334_206108-212818' '(at3g12170 : 275.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: J-domain protein 6 (TAIR:AT5G06910.1); Has 23895 Blast hits to 23888 proteins in 3317 species: Archae - 171; Bacteria - 9423; Metazoa - 4258; Fungi - 2263; Plants - 2420; Viruses - 67; Other Eukaryotes - 5293 (source: NCBI BLink). & (gnl|cdd|35938 : 202.0) no description available & (gnl|cdd|30832 : 94.9) no description available & (reliability: 550.0) & (original description: Putative ATJ6, Description = Chaperone protein dnaJ 6, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf11364_126433-130942' '(at4g13830 : 175.0) DnaJ-like protein (J20); nuclear gene; DNAJ-like 20 (J20); FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding, response to stress; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT4G39960.1); Has 22791 Blast hits to 22789 proteins in 3231 species: Archae - 176; Bacteria - 9466; Metazoa - 3791; Fungi - 2164; Plants - 2102; Viruses - 8; Other Eukaryotes - 5084 (source: NCBI BLink). & (gnl|cdd|30832 : 89.5) no description available & (reliability: 350.0) & (original description: Putative C20, Description = Chaperone protein dnaJ 20, chloroplastic, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf11512_237005-240764' '(at2g26150 : 236.0) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.; heat shock transcription factor A2 (HSFA2); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35846 : 164.0) no description available & (gnl|cdd|84779 : 147.0) no description available & (reliability: 472.0) & (original description: Putative Hsf1, Description = Heat shock factor, PFAM = PF00447)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf11552_400477-404951' '(at2g20560 : 373.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT4G28480.1); Has 27936 Blast hits to 27733 proteins in 3449 species: Archae - 187; Bacteria - 10270; Metazoa - 4781; Fungi - 2609; Plants - 2869; Viruses - 17; Other Eukaryotes - 7203 (source: NCBI BLink). & (gnl|cdd|30832 : 208.0) no description available & (gnl|cdd|35933 : 204.0) no description available & (q04960|dnjh_cucsa : 99.8) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 746.0) & (original description: Putative hsp40, Description = Heat shock protein 40, PFAM = PF00226;PF01556)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf12154_125691-130836' '(at5g02500 : 1067.0) encodes a member of heat shock protein 70 family.; heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cold, response to virus, response to heat; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p09189|hsp7c_pethy : 1067.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (gnl|cdd|35323 : 895.0) no description available & (gnl|cdd|84440 : 885.0) no description available & (reliability: 2134.0) & (original description: Putative LIM18, Description = HSP70, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf12405_82583-131733' '(at2g25140 : 1366.0) Encodes ClpB4, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Targeted to the mitochondrion, also referred to as ClpB-m. Transcripts of ClpB4 accumulate dramatically at high temperatures, suggesting that it may be involved in response to heat stress.; casein lytic proteinase B4 (CLPB4); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: response to heat; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpB (InterPro:IPR017730), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: casein lytic proteinase B3 (TAIR:AT5G15450.1); Has 30488 Blast hits to 27328 proteins in 3166 species: Archae - 421; Bacteria - 19864; Metazoa - 870; Fungi - 613; Plants - 740; Viruses - 7; Other Eukaryotes - 7973 (source: NCBI BLink). & (gnl|cdd|30888 : 940.0) no description available & (gnl|cdd|36269 : 828.0) no description available & (q6f2y7|hs101_orysa : 743.0) Heat shock protein 101 - Oryza sativa (Rice) & (reliability: 2732.0) & (original description: Putative clpB, Description = ClpB, PFAM = PF10431;PF02861;PF02861;PF00004;PF07724)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf12424_161640-168411' '(at5g06910 : 290.0) DnaJ homologue, contains J domain which is common in all known DnaJ proteins but missing G/F domain.; J-domain protein 6 (ATJ6); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT3G12170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35938 : 214.0) no description available & (gnl|cdd|30832 : 101.0) no description available & (reliability: 580.0) & (original description: Putative ATJ6, Description = Chaperone protein dnaJ 6, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf12868_62121-66949' '(p09189|hsp7c_pethy : 1097.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at3g12580 : 1094.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (gnl|cdd|35323 : 905.0) no description available & (gnl|cdd|84440 : 890.0) no description available & (reliability: 2188.0) & (original description: Putative HSP70, Description = Heat shock cognate 70 kDa protein, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf13748_72301-75418' '(at4g09350 : 241.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT1G80030.2); Has 22215 Blast hits to 22211 proteins in 3226 species: Archae - 172; Bacteria - 9488; Metazoa - 3742; Fungi - 1942; Plants - 2004; Viruses - 8; Other Eukaryotes - 4859 (source: NCBI BLink). & (gnl|cdd|30832 : 82.6) no description available & (reliability: 482.0) & (original description: Putative dnaJ, Description = Chaperone DnaJ-domain superfamily protein, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf13748_72549-74616' '(at4g09350 : 245.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT1G80030.2); Has 22215 Blast hits to 22211 proteins in 3226 species: Archae - 172; Bacteria - 9488; Metazoa - 3742; Fungi - 1942; Plants - 2004; Viruses - 8; Other Eukaryotes - 4859 (source: NCBI BLink). & (gnl|cdd|30832 : 83.0) no description available & (reliability: 490.0) & (original description: Putative ndhT, Description = NAD(P)H-quinone oxidoreductase subunit T, chloroplastic, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf14115_178656-184799' '(at2g35540 : 216.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G25560.1); Has 8542 Blast hits to 8312 proteins in 1764 species: Archae - 53; Bacteria - 3482; Metazoa - 1739; Fungi - 476; Plants - 1179; Viruses - 0; Other Eukaryotes - 1613 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative At2g35540, Description = Chaperone protein dnaJ 49, PFAM = PF11926;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf14282_182698-189170' '(at5g16650 : 132.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT2G33735.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30832 : 100.0) no description available & (gnl|cdd|35935 : 80.1) no description available & (reliability: 264.0) & (original description: Putative dnaJ, Description = Chaperone protein DnaJ, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf14394_203640-212483' '(q03684|bip4_tobac : 1083.0) Luminal-binding protein 4 precursor (BiP 4) (78 kDa glucose-regulated protein homolog 4) (GRP 78-4) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35323 : 1080.0) no description available & (at5g28540 : 1053.0) Encodes the luminal binding protein BiP, an ER-localized member of the HSP70 family. BiP is composed of an N-terminal ATP binding domain and a C-terminal domain that binds to hydrophobic patches on improperly/incompletely folded proteins in an ATP-dependent manner. Involved in polar nuclei fusion during proliferation of endosperm nuclei.; BIP1; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, ER-associated protein catabolic process, response to heat, polar nucleus fusion; LOCATED IN: cell wall, plasma membrane, chloroplast, vacuole, endoplasmic reticulum lumen; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G42020.1); Has 36391 Blast hits to 35786 proteins in 4820 species: Archae - 162; Bacteria - 17493; Metazoa - 3988; Fungi - 1814; Plants - 1283; Viruses - 341; Other Eukaryotes - 11310 (source: NCBI BLink). & (gnl|cdd|84440 : 854.0) no description available & (reliability: 2106.0) & (original description: Putative grp78, Description = Glucose-regulated protein 78, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf15104_32692-40013' '(at5g49580 : 496.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G16680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35939 : 304.0) no description available & (gnl|cdd|84624 : 89.4) no description available & (reliability: 992.0) & (original description: Putative At5g49580, Description = Chaperone DnaJ-domain containing protein, PFAM = PF14901;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf15166_304993-309910' '(p33126|hsp81_orysa : 1045.0) Heat shock protein 81-1 (HSP81-1) (Heat shock protein 82) - Oryza sativa (Rice) & (at5g56030 : 1044.0) A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c.; heat shock protein 81-2 (HSP81-2); CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 81.4 (TAIR:AT5G56000.1). & (gnl|cdd|35242 : 827.0) no description available & (gnl|cdd|84591 : 766.0) no description available & (reliability: 2088.0) & (original description: Putative hsp90, Description = Chaperone HSP90, PFAM = PF00183;PF02518)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf15536_241118-247654' '(gnl|cdd|35323 : 1079.0) no description available & (q03684|bip4_tobac : 1077.0) Luminal-binding protein 4 precursor (BiP 4) (78 kDa glucose-regulated protein homolog 4) (GRP 78-4) - Nicotiana tabacum (Common tobacco) & (at5g28540 : 1050.0) Encodes the luminal binding protein BiP, an ER-localized member of the HSP70 family. BiP is composed of an N-terminal ATP binding domain and a C-terminal domain that binds to hydrophobic patches on improperly/incompletely folded proteins in an ATP-dependent manner. Involved in polar nuclei fusion during proliferation of endosperm nuclei.; BIP1; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, ER-associated protein catabolic process, response to heat, polar nucleus fusion; LOCATED IN: cell wall, plasma membrane, chloroplast, vacuole, endoplasmic reticulum lumen; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G42020.1); Has 36391 Blast hits to 35786 proteins in 4820 species: Archae - 162; Bacteria - 17493; Metazoa - 3988; Fungi - 1814; Plants - 1283; Viruses - 341; Other Eukaryotes - 11310 (source: NCBI BLink). & (gnl|cdd|84440 : 854.0) no description available & (reliability: 2100.0) & (original description: Putative bip, Description = Luminal binding protein, BiP, PFAM = PF00012)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf15972_131464-137770' '(at1g74310 : 1391.0) Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature.; heat shock protein 101 (HSP101); FUNCTIONS IN: protein binding, ATPase activity, ATP binding; INVOLVED IN: response to high light intensity, response to hydrogen peroxide, response to heat, protein unfolding; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: casein lytic proteinase B2 (TAIR:AT4G14670.1); Has 27671 Blast hits to 24472 proteins in 3146 species: Archae - 360; Bacteria - 17866; Metazoa - 1124; Fungi - 430; Plants - 707; Viruses - 13; Other Eukaryotes - 7171 (source: NCBI BLink). & (q6f2y7|hs101_orysa : 1344.0) Heat shock protein 101 - Oryza sativa (Rice) & (gnl|cdd|30888 : 888.0) no description available & (gnl|cdd|36269 : 824.0) no description available & (reliability: 2782.0) & (original description: Putative CLPB1, Description = Chaperone protein ClpB1, PFAM = PF10431;PF07724;PF00004;PF02861;PF02861)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf15972_203904-209490' '(at1g74250 : 393.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding, zinc ion binding, nucleic acid binding; INVOLVED IN: protein folding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Zinc finger, U1-type (InterPro:IPR003604), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DnaJ domain ;Myb-like DNA-binding domain (TAIR:AT3G11450.1); Has 93426 Blast hits to 65819 proteins in 3757 species: Archae - 599; Bacteria - 15939; Metazoa - 31666; Fungi - 9634; Plants - 4994; Viruses - 419; Other Eukaryotes - 30175 (source: NCBI BLink). & (gnl|cdd|35936 : 304.0) no description available & (reliability: 786.0) & (original description: Putative JJJ1, Description = DNAJ protein JJJ1 homolog, PFAM = PF00226;PF12171)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf18985_4401-7447' '(at3g57340 : 287.0) FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Protein of unknown function DUF1977, DnaJ-like (InterPro:IPR015399), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G05750.1); Has 24356 Blast hits to 24336 proteins in 3323 species: Archae - 190; Bacteria - 9449; Metazoa - 4326; Fungi - 2357; Plants - 2505; Viruses - 22; Other Eukaryotes - 5507 (source: NCBI BLink). & (gnl|cdd|30832 : 104.0) no description available & (reliability: 574.0) & (original description: Putative ATJ49, Description = Chaperone protein dnaJ 49, PFAM = PF09320;PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf21560_214543-242826' '(q01545|hsp22_iponi : 146.0) 18.8 kDa class II heat shock protein - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (at5g12020 : 132.0) 17.6 kDa class II heat shock protein (HSP17.6II); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84439 : 100.0) no description available & (gnl|cdd|35929 : 94.0) no description available & (reliability: 264.0) & (original description: Putative hsp2, Description = 17.6 kDa class II heat shock protein, PFAM = PF00011)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf24355_41171-52261' '(at4g07990 : 194.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G18140.1). & (reliability: 388.0) & (original description: Putative BnaC03g27990D, Description = BnaC03g27990D protein, PFAM = PF00226)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf27914_1890-9435' '(p35016|enpl_catro : 1187.0) Endoplasmin homolog precursor (GRP94 homolog) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g24190 : 1139.0) encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues.; SHEPHERD (SHD); FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Molecular chaperone, heat shock protein, endoplasmin (InterPro:IPR015566), ATPase-like, ATP-binding domain (InterPro:IPR003594), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: heat shock protein 90.1 (TAIR:AT5G52640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35243 : 977.0) no description available & (gnl|cdd|84591 : 672.0) no description available & (reliability: 2278.0) & (original description: Putative hspD, Description = Heat shock protein 90, PFAM = PF02518;PF00183)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf30670_93228-102977' '(at2g42750 : 428.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G23240.1); Has 17700 Blast hits to 17698 proteins in 3061 species: Archae - 180; Bacteria - 8514; Metazoa - 2668; Fungi - 1485; Plants - 1554; Viruses - 15; Other Eukaryotes - 3284 (source: NCBI BLink). & (gnl|cdd|35935 : 161.0) no description available & (gnl|cdd|84624 : 81.0) no description available & (reliability: 856.0) & (original description: Putative dnj38, Description = Chloroplast heat shock protein-binding protein, PFAM = PF00226;PF13370)' T '20.2.1' 'stress.abiotic.heat' 'niben101scf34129_4441-8140' '(at5g54660 : 181.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative HSP21.7, Description = 21.7 kDa class VI heat shock protein, PFAM = PF00011)' T '20.2.2' 'stress.abiotic.cold' 'nbv0.3scaffold1502_66799-69345' '(gnl|cdd|84686 : 87.2) no description available & (at4g36020 : 86.3) Encodes a cold shock domain protein. Involved in cold acclimation by blocking the secondary structure of mRNA which in turn facilitates translation at cold temperature.; cold shock domain protein 1 (CSDP1); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Cold shock protein (InterPro:IPR011129), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: cold shock domain protein 3 (TAIR:AT2G17870.1); Has 93964 Blast hits to 39618 proteins in 2725 species: Archae - 55; Bacteria - 19157; Metazoa - 4501; Fungi - 1919; Plants - 2885; Viruses - 60267; Other Eukaryotes - 5180 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative cspA, Description = Cold-shock protein, PFAM = PF00098;PF00098;PF00098;PF00313)' T '20.2.2' 'stress.abiotic.cold' 'nbv0.3scaffold15192_7458-12651' '(at3g55990 : 566.0) Encodes ESK1 (Eskimo1). A member of a large gene family of DUF231 domain proteins whose members encode a total of 45 proteins of unknown function. ESK1 functions as a negative regulator of cold acclimation. Mutations in the ESK1 gene provides strong freezing tolerance. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; ESKIMO 1 (ESK1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to freezing, positive regulation of transcription, response to cold; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 28 (TAIR:AT2G40150.1); Has 1336 Blast hits to 1309 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1334; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 180.0) no description available & (reliability: 1132.0) & (original description: Putative TBL28, Description = Protein trichome birefringence-like 28, PFAM = PF14416;PF13839)' T '20.2.2' 'stress.abiotic.cold' 'nbv0.3scaffold16654_5350-9666' '(at2g33320 : 228.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative At1g04540, Description = BnaA09g00140D protein, PFAM = PF00168)' T '20.2.2' 'stress.abiotic.cold' 'nbv0.3scaffold17459_4493-8829' '(at3g55990 : 290.0) Encodes ESK1 (Eskimo1). A member of a large gene family of DUF231 domain proteins whose members encode a total of 45 proteins of unknown function. ESK1 functions as a negative regulator of cold acclimation. Mutations in the ESK1 gene provides strong freezing tolerance. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; ESKIMO 1 (ESK1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to freezing, positive regulation of transcription, response to cold; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 28 (TAIR:AT2G40150.1); Has 1336 Blast hits to 1309 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1334; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 143.0) no description available & (reliability: 580.0) & (original description: Putative Os05g0587700, Description = Os05g0587700 protein, PFAM = PF14416;PF13839)' T '20.2.2' 'stress.abiotic.cold' 'nbv0.3scaffold18206_9193-21529' '(gnl|cdd|29388 : 266.0) no description available & (at5g17820 : 182.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: root, leaf; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G03670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p22196|per2_arahy : 177.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 336.0) & (original description: Putative prx34, Description = Peroxidase, PFAM = PF00141)' T '20.2.2' 'stress.abiotic.cold' 'nbv0.3scaffold31907_7349-10602' '(at5g12300 : 222.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT5G55530.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative BnaC06g03720D, Description = BnaC06g03720D protein, PFAM = PF00168)' T '20.2.2' 'stress.abiotic.cold' 'nbv0.3scaffold34338_13585-17594' '(at2g33320 : 221.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 434.0) & (original description: Putative At1g04540, Description = BnaA09g00140D protein, PFAM = PF00168)' T '20.2.2' 'stress.abiotic.cold' 'nbv0.3scaffold36760_8261-12525' '(at2g33320 : 224.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative At1g04540, Description = Putative ankyrin repeat-containing protein kinase A-like, PFAM = PF00168)' T '20.2.2' 'stress.abiotic.cold' 'nbv0.3scaffold67033_2976-5656' '(p27484|grp2_nicsy : 105.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at4g38680 : 86.3) Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development.; glycine rich protein 2 (GRP2); FUNCTIONS IN: double-stranded DNA binding, mRNA binding, single-stranded DNA binding, nucleic acid binding; INVOLVED IN: stamen development, vegetative to reproductive phase transition of meristem, response to cold, seed development, DNA duplex unwinding; LOCATED IN: nucleolus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 37 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold shock protein (InterPro:IPR011129), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine-rich protein 2B (TAIR:AT2G21060.1); Has 150401 Blast hits to 55289 proteins in 3379 species: Archae - 285; Bacteria - 51625; Metazoa - 48133; Fungi - 9113; Plants - 13783; Viruses - 1771; Other Eukaryotes - 25691 (source: NCBI BLink). & (gnl|cdd|84686 : 85.2) no description available & (reliability: 172.6) & (original description: Putative nab1, Description = Glycine-rich protein 2, PFAM = PF00098;PF00313)' T '20.2.2' 'stress.abiotic.cold' 'nbv0.3scaffold76876_4344-7138' '(at5g23950 : 146.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G07310.1); Has 7173 Blast hits to 1801 proteins in 194 species: Archae - 14; Bacteria - 856; Metazoa - 2022; Fungi - 1141; Plants - 806; Viruses - 64; Other Eukaryotes - 2270 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative cht STR1, Description = Putative stress related chitinase, PFAM = PF00168)' T '20.2.2' 'stress.abiotic.cold' 'nbv0.3scaffold77959_5950-7569' '(at1g05260 : 224.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 189.0) no description available & (p37834|per1_orysa : 176.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 448.0) & (original description: Putative pa9, Description = Peroxidase, PFAM = PF00141)' T '20.2.2' 'stress.abiotic.cold' 'nbv0.3scaffold108878_536-3057' '(gnl|cdd|29388 : 129.0) no description available & (at4g11290 : 105.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p37834|per1_orysa : 98.6) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 202.0) & (original description: Putative prx18, Description = Peroxidase, PFAM = PF00141)' T '20.2.2' 'stress.abiotic.cold' 'nbv0.5scaffold1381_159875-163062' '(at2g33320 : 172.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative At1g04540, Description = BnaA09g00140D protein, PFAM = PF00168)' T '20.2.2' 'stress.abiotic.cold' 'nbv0.5scaffold2291_127507-131833' '(at2g33320 : 219.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative At1g04540, Description = Putative ankyrin repeat-containing protein kinase A-like, PFAM = PF00168)' T '20.2.2' 'stress.abiotic.cold' 'nbv0.5scaffold7257_15598-18305' '(p27484|grp2_nicsy : 102.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at4g38680 : 92.8) Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development.; glycine rich protein 2 (GRP2); FUNCTIONS IN: double-stranded DNA binding, mRNA binding, single-stranded DNA binding, nucleic acid binding; INVOLVED IN: stamen development, vegetative to reproductive phase transition of meristem, response to cold, seed development, DNA duplex unwinding; LOCATED IN: nucleolus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 37 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold shock protein (InterPro:IPR011129), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine-rich protein 2B (TAIR:AT2G21060.1); Has 150401 Blast hits to 55289 proteins in 3379 species: Archae - 285; Bacteria - 51625; Metazoa - 48133; Fungi - 9113; Plants - 13783; Viruses - 1771; Other Eukaryotes - 25691 (source: NCBI BLink). & (gnl|cdd|84686 : 84.5) no description available & (reliability: 185.6) & (original description: Putative nab1, Description = Glycine-rich protein 2, PFAM = PF00313;PF00098)' T '20.2.2' 'stress.abiotic.cold' 'niben044scf00003840ctg012_4402-7082' '(p27484|grp2_nicsy : 100.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|36139 : 86.5) no description available & (at4g38680 : 85.9) Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development.; glycine rich protein 2 (GRP2); FUNCTIONS IN: double-stranded DNA binding, mRNA binding, single-stranded DNA binding, nucleic acid binding; INVOLVED IN: stamen development, vegetative to reproductive phase transition of meristem, response to cold, seed development, DNA duplex unwinding; LOCATED IN: nucleolus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 37 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold shock protein (InterPro:IPR011129), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine-rich protein 2B (TAIR:AT2G21060.1); Has 150401 Blast hits to 55289 proteins in 3379 species: Archae - 285; Bacteria - 51625; Metazoa - 48133; Fungi - 9113; Plants - 13783; Viruses - 1771; Other Eukaryotes - 25691 (source: NCBI BLink). & (gnl|cdd|84686 : 85.2) no description available & (reliability: 171.8) & (original description: Putative CSP4, Description = Cold shock domain-containing protein 4, PFAM = PF00313;PF00098;PF00098)' T '20.2.2' 'stress.abiotic.cold' 'niben044scf00009119ctg003_10168-14725' '(at2g33320 : 223.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 434.0) & (original description: Putative At1g04540, Description = Putative ankyrin repeat-containing protein kinase A-like, PFAM = PF00168)' T '20.2.2' 'stress.abiotic.cold' 'niben044scf00010803ctg003_1-4278' '(at3g55990 : 341.0) Encodes ESK1 (Eskimo1). A member of a large gene family of DUF231 domain proteins whose members encode a total of 45 proteins of unknown function. ESK1 functions as a negative regulator of cold acclimation. Mutations in the ESK1 gene provides strong freezing tolerance. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; ESKIMO 1 (ESK1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to freezing, positive regulation of transcription, response to cold; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 28 (TAIR:AT2G40150.1); Has 1336 Blast hits to 1309 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1334; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 682.0) & (original description: Putative ESK1, Description = Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein, PFAM = PF14416;PF13839)' T '20.2.2' 'stress.abiotic.cold' 'niben044scf00011992ctg000_2882-6262' '(gnl|cdd|29388 : 414.0) no description available & (at3g03670 : 248.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G17820.1); Has 4234 Blast hits to 4201 proteins in 214 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 58; Plants - 4144; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (p22196|per2_arahy : 245.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 466.0) & (original description: Putative prx6, Description = Peroxidase, PFAM = PF00141)' T '20.2.2' 'stress.abiotic.cold' 'niben044scf00024562ctg004_20041-23897' '(at1g05260 : 428.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 421.0) no description available & (p37834|per1_orysa : 333.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 856.0) & (original description: Putative pb7, Description = Peroxidase, PFAM = PF00141)' T '20.2.2' 'stress.abiotic.cold' 'niben044scf00032616ctg002_1200-4693' '(gnl|cdd|29388 : 135.0) no description available & (at4g33870 : 109.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G41480.1); Has 3863 Blast hits to 3848 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 67; Plants - 3768; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (p37834|per1_orysa : 105.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 212.0) & (original description: Putative prx18, Description = Peroxidase, PFAM = PF00141)' T '20.2.2' 'stress.abiotic.cold' 'niben044scf00037141ctg001_18787-22968' '(gnl|cdd|29388 : 330.0) no description available & (at4g11290 : 232.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p22196|per2_arahy : 222.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 426.0) & (original description: Putative PER2, Description = Peroxidase 2, PFAM = PF00141)' T '20.2.2' 'stress.abiotic.cold' 'niben044scf00039906ctg003_1514-5037' '(at5g55530 : 350.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G50570.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 700.0) & (original description: Putative BnaC06g03720D, Description = BnaC06g03720D protein, PFAM = PF00168)' T '20.2.2' 'stress.abiotic.cold' 'niben044scf00044656ctg003_1-8743' '(gnl|cdd|35494 : 219.0) no description available & (at5g67320 : 163.0) Encodes a WD-40 protein involved in histone deacetylation in response to abiotic stress.Identified in a screen for mutations with altered expression of stress induced genes. Functions as a repressor of cold tolerance induced genes. Loss of function mutants are hypersensitive to freezing.; high expression of osmotically responsive genes 15 (HOS15); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative ebi, Description = F-box-like/WD repeat-containing protein ebi, PFAM = PF08513;PF00400;PF00400)' T '20.2.2' 'stress.abiotic.cold' 'niben101ctg12711_1-1633' '(gnl|cdd|29388 : 391.0) no description available & (p22195|per1_arahy : 258.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at1g44970 : 253.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4592 Blast hits to 4563 proteins in 305 species: Archae - 0; Bacteria - 10; Metazoa - 5; Fungi - 193; Plants - 4307; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative PER1, Description = Peroxidase 1, PFAM = PF00141)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf00159_688439-691641' '(at5g55530 : 277.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G50570.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 554.0) & (original description: Putative BnaC06g03720D, Description = BnaC06g03720D protein, PFAM = PF00168)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf00308_61291-65015' '(gnl|cdd|29388 : 414.0) no description available & (at3g21770 : 275.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: cell wall, nucleus, plant-type cell wall, cytoplasm; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05260.1); Has 4451 Blast hits to 4425 proteins in 278 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 123; Plants - 4268; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (p37834|per1_orysa : 265.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 544.0) & (original description: Putative pb7, Description = Peroxidase, PFAM = PF00141)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf00402_558590-561894' '(gnl|cdd|29388 : 414.0) no description available & (at3g03670 : 254.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G17820.1); Has 4234 Blast hits to 4201 proteins in 214 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 58; Plants - 4144; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (p22195|per1_arahy : 251.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 464.0) & (original description: Putative PER2, Description = Peroxidase 2, PFAM = PF00141)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf00416_123850-127394' '(gnl|cdd|29388 : 405.0) no description available & (p22196|per2_arahy : 261.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (at5g51890 : 259.0) encodes peroxidase involved in the lignification of tracheary elements (TE) in roots; Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G42180.1); Has 4522 Blast hits to 4498 proteins in 281 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 153; Plants - 4313; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative POD, Description = Peroxidase, PFAM = PF00141)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf00595_91654-94637' '(at5g23950 : 145.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G07310.1); Has 7173 Blast hits to 1801 proteins in 194 species: Archae - 14; Bacteria - 856; Metazoa - 2022; Fungi - 1141; Plants - 806; Viruses - 64; Other Eukaryotes - 2270 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative cht STR1, Description = Putative stress related chitinase, PFAM = PF00168)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf00683_264493-267776' '(at5g55530 : 357.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G50570.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 714.0) & (original description: Putative BnaC06g03720D, Description = BnaC06g03720D protein, PFAM = PF00168)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf00773_874246-881028' '(at3g55990 : 599.0) Encodes ESK1 (Eskimo1). A member of a large gene family of DUF231 domain proteins whose members encode a total of 45 proteins of unknown function. ESK1 functions as a negative regulator of cold acclimation. Mutations in the ESK1 gene provides strong freezing tolerance. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; ESKIMO 1 (ESK1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to freezing, positive regulation of transcription, response to cold; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 28 (TAIR:AT2G40150.1); Has 1336 Blast hits to 1309 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1334; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 170.0) no description available & (reliability: 1198.0) & (original description: Putative ESK1, Description = Protein ESKIMO 1, PFAM = PF13839;PF14416)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf01037_281173-284764' '(at1g05260 : 433.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 415.0) no description available & (p37834|per1_orysa : 322.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 866.0) & (original description: Putative pb7, Description = Peroxidase, PFAM = PF00141)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf01230_250993-254852' '(gnl|cdd|29388 : 353.0) no description available & (at3g03670 : 235.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G17820.1); Has 4234 Blast hits to 4201 proteins in 214 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 58; Plants - 4144; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (p22196|per2_arahy : 227.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 428.0) & (original description: Putative px1, Description = Peroxidase, PFAM = PF00141)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf01380_301847-312064' '(gnl|cdd|29388 : 311.0) no description available & (at4g33870 : 218.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G41480.1); Has 3863 Blast hits to 3848 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 67; Plants - 3768; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (p22195|per1_arahy : 186.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 400.0) & (original description: Putative prx18, Description = Peroxidase, PFAM = PF00141)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf01920_1-4291' '(gnl|cdd|29388 : 376.0) no description available & (at1g44970 : 260.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4592 Blast hits to 4563 proteins in 305 species: Archae - 0; Bacteria - 10; Metazoa - 5; Fungi - 193; Plants - 4307; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (p22196|per2_arahy : 255.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 468.0) & (original description: Putative prx6, Description = Peroxidase, PFAM = PF00141)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf02039_289520-292650' '(at1g04540 : 135.0) Calcium-dependent lipid-binding (CaLB domain) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT2G33320.1); Has 556 Blast hits to 454 proteins in 75 species: Archae - 0; Bacteria - 32; Metazoa - 92; Fungi - 46; Plants - 336; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative At1g04540, Description = T6K12.2 protein, PFAM = PF00168)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf02054_219381-241732' '(at2g33320 : 177.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative At1g04540, Description = BnaA09g00140D protein, PFAM = PF00168)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf02344_434351-437639' '(at2g33320 : 172.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative At1g04540, Description = BnaA09g00140D protein, PFAM = PF00168)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf02583_690083-692913' '(at4g36020 : 91.3) Encodes a cold shock domain protein. Involved in cold acclimation by blocking the secondary structure of mRNA which in turn facilitates translation at cold temperature.; cold shock domain protein 1 (CSDP1); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Cold shock protein (InterPro:IPR011129), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: cold shock domain protein 3 (TAIR:AT2G17870.1); Has 93964 Blast hits to 39618 proteins in 2725 species: Archae - 55; Bacteria - 19157; Metazoa - 4501; Fungi - 1919; Plants - 2885; Viruses - 60267; Other Eukaryotes - 5180 (source: NCBI BLink). & (gnl|cdd|84686 : 84.1) no description available & (reliability: 182.6) & (original description: Putative cspA, Description = Glycine-rich protein 2, PFAM = PF00098;PF00098;PF00098;PF00313)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf02601_323262-327271' '(at2g33320 : 223.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative At1g04540, Description = Putative ankyrin repeat-containing protein kinase A-like, PFAM = PF00168)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf02606_678330-683212' '(at2g33320 : 160.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative At1g04540, Description = BnaA09g00140D protein, PFAM = PF00168)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf02658_185191-188189' '(p27484|grp2_nicsy : 100.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at2g21060 : 87.0) glycine-rich protein (AtGRP2b); glycine-rich protein 2B (GRP2B); FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Cold shock protein (InterPro:IPR011129), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine rich protein 2 (TAIR:AT4G38680.1); Has 124576 Blast hits to 52040 proteins in 3306 species: Archae - 178; Bacteria - 46955; Metazoa - 35565; Fungi - 6939; Plants - 11254; Viruses - 1676; Other Eukaryotes - 22009 (source: NCBI BLink). & (gnl|cdd|84686 : 85.6) no description available & (reliability: 171.0) & (original description: Putative cspA, Description = Glycine-rich protein 2, PFAM = PF00098;PF00313)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf02968_675414-678213' '(at1g05260 : 179.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 168.0) no description available & (p37834|per1_orysa : 137.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 358.0) & (original description: Putative pb7, Description = Peroxidase, PFAM = PF00141)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf03077_4795-18699' '(gnl|cdd|35494 : 586.0) no description available & (at5g67320 : 554.0) Encodes a WD-40 protein involved in histone deacetylation in response to abiotic stress.Identified in a screen for mutations with altered expression of stress induced genes. Functions as a repressor of cold tolerance induced genes. Loss of function mutants are hypersensitive to freezing.; high expression of osmotically responsive genes 15 (HOS15); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29257 : 245.0) no description available & (p93107|pf20_chlre : 117.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1108.0) & (original description: Putative ebi, Description = F-box-like/WD repeat-containing protein TBL1XR1, PFAM = PF08513;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf03526_198627-202891' '(at2g33320 : 199.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 386.0) & (original description: Putative At1g04540, Description = Putative ankyrin repeat-containing protein kinase A-like, PFAM = PF00168)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf03565_399990-402784' '(at5g23950 : 147.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G07310.1); Has 7173 Blast hits to 1801 proteins in 194 species: Archae - 14; Bacteria - 856; Metazoa - 2022; Fungi - 1141; Plants - 806; Viruses - 64; Other Eukaryotes - 2270 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative cht STR1, Description = Putative stress related chitinase, PFAM = PF00168)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf03779_325397-331455' '(at3g55990 : 637.0) Encodes ESK1 (Eskimo1). A member of a large gene family of DUF231 domain proteins whose members encode a total of 45 proteins of unknown function. ESK1 functions as a negative regulator of cold acclimation. Mutations in the ESK1 gene provides strong freezing tolerance. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; ESKIMO 1 (ESK1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to freezing, positive regulation of transcription, response to cold; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 28 (TAIR:AT2G40150.1); Has 1336 Blast hits to 1309 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1334; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 174.0) no description available & (reliability: 1274.0) & (original description: Putative ESK1, Description = Protein ESKIMO 1, PFAM = PF14416;PF13839)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf03905_308295-324920' '(at3g17020 : 234.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cold, response to stress; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G03270.2); Has 3326 Blast hits to 3271 proteins in 769 species: Archae - 372; Bacteria - 2020; Metazoa - 115; Fungi - 79; Plants - 685; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|30165 : 85.2) no description available & (reliability: 468.0) & (original description: Putative USP1, Description = Universal stress protein 1, PFAM = PF00582)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf04220_329346-332809' '(at1g05260 : 418.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 412.0) no description available & (p37834|per1_orysa : 331.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 836.0) & (original description: Putative pb7, Description = Peroxidase, PFAM = PF00141)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf04327_280667-283777' '(p27484|grp2_nicsy : 101.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at4g38680 : 86.3) Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development.; glycine rich protein 2 (GRP2); FUNCTIONS IN: double-stranded DNA binding, mRNA binding, single-stranded DNA binding, nucleic acid binding; INVOLVED IN: stamen development, vegetative to reproductive phase transition of meristem, response to cold, seed development, DNA duplex unwinding; LOCATED IN: nucleolus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 37 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold shock protein (InterPro:IPR011129), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine-rich protein 2B (TAIR:AT2G21060.1); Has 150401 Blast hits to 55289 proteins in 3379 species: Archae - 285; Bacteria - 51625; Metazoa - 48133; Fungi - 9113; Plants - 13783; Viruses - 1771; Other Eukaryotes - 25691 (source: NCBI BLink). & (gnl|cdd|84686 : 85.2) no description available & (reliability: 172.6) & (original description: Putative nab1, Description = Glycine-rich protein 2, PFAM = PF00313;PF00098)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf04669_347329-351384' '(at3g12060 : 280.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 1 (TBL1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT5G06700.1); Has 1352 Blast hits to 1335 proteins in 32 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 1346; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|72785 : 153.0) no description available & (reliability: 536.0) & (original description: Putative Os05g0587700, Description = Os05g0587700 protein, PFAM = PF14416;PF13839)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf04854_234361-254148' '(gnl|cdd|35494 : 592.0) no description available & (at5g67320 : 561.0) Encodes a WD-40 protein involved in histone deacetylation in response to abiotic stress.Identified in a screen for mutations with altered expression of stress induced genes. Functions as a repressor of cold tolerance induced genes. Loss of function mutants are hypersensitive to freezing.; high expression of osmotically responsive genes 15 (HOS15); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29257 : 241.0) no description available & (p93107|pf20_chlre : 114.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1122.0) & (original description: Putative ebi, Description = F-box-like/WD repeat-containing protein TBL1XR1, PFAM = PF08513;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf04995_925385-947965' '(gnl|cdd|35494 : 457.0) no description available & (at5g67320 : 445.0) Encodes a WD-40 protein involved in histone deacetylation in response to abiotic stress.Identified in a screen for mutations with altered expression of stress induced genes. Functions as a repressor of cold tolerance induced genes. Loss of function mutants are hypersensitive to freezing.; high expression of osmotically responsive genes 15 (HOS15); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29257 : 187.0) no description available & (p93107|pf20_chlre : 100.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 890.0) & (original description: Putative ebi, Description = F-box-like/WD repeat-containing protein TBL1XR1, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF08513)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf06204_59128-62411' '(at5g55530 : 360.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G50570.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 720.0) & (original description: Putative BnaC06g03720D, Description = BnaC06g03720D protein, PFAM = PF00168)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf06602_52476-55975' '(at1g05260 : 460.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 416.0) no description available & (p37834|per1_orysa : 349.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 920.0) & (original description: Putative pb7, Description = Peroxidase, PFAM = PF00141)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf06883_56335-59172' '(at3g53990 : 238.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cold, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G03270.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30165 : 85.6) no description available & (reliability: 476.0) & (original description: Putative USP1, Description = Universal stress protein 1, PFAM = PF00582)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf06883_100868-104845' '(at3g53990 : 239.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cold, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G03270.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30165 : 90.6) no description available & (reliability: 478.0) & (original description: Putative enod18, Description = Early nodulin ENOD18, PFAM = PF00582)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf07163_252328-255623' '(at5g55530 : 401.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G50570.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 802.0) & (original description: Putative BnaC06g03720D, Description = BnaC06g03720D protein, PFAM = PF00168)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf07388_53558-56999' '(at1g05260 : 431.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 418.0) no description available & (p37834|per1_orysa : 334.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 862.0) & (original description: Putative PER30, Description = Peroxidase 30, PFAM = PF00141)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf07709_79544-84057' '(gnl|cdd|69104 : 247.0) no description available & (at3g50830 : 214.0) cold acclimation protein WCOR413-like protein beta form. Transcript is not detectable.; cold-regulated 413-plasma membrane 2 (COR413-PM2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cold acclimation WCOR413 (InterPro:IPR008892); BEST Arabidopsis thaliana protein match is: Cold acclimation protein WCOR413 family (TAIR:AT4G37220.1); Has 158 Blast hits to 155 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative At4g37220, Description = Cold-regulated 413 plasma membrane protein 4, PFAM = PF05562)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf07713_69645-72850' '(at5g55530 : 281.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G50570.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 562.0) & (original description: Putative BnaC06g03720D, Description = BnaC06g03720D protein, PFAM = PF00168)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf10162_181972-186153' '(gnl|cdd|29388 : 326.0) no description available & (at4g11290 : 231.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p22196|per2_arahy : 219.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 422.0) & (original description: Putative PRX70, Description = Peroxidase, PFAM = PF00141)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf12797_61474-66626' '(at3g55990 : 565.0) Encodes ESK1 (Eskimo1). A member of a large gene family of DUF231 domain proteins whose members encode a total of 45 proteins of unknown function. ESK1 functions as a negative regulator of cold acclimation. Mutations in the ESK1 gene provides strong freezing tolerance. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; ESKIMO 1 (ESK1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to freezing, positive regulation of transcription, response to cold; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 28 (TAIR:AT2G40150.1); Has 1336 Blast hits to 1309 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1334; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 180.0) no description available & (reliability: 1130.0) & (original description: Putative Os12g0104700, Description = Expressed protein, PFAM = PF13839;PF14416)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf15048_49566-52347' '(at5g55530 : 375.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G50570.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 750.0) & (original description: Putative BnaC06g03720D, Description = BnaC06g03720D protein, PFAM = PF00168)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf18531_146609-149423' '(at3g53990 : 139.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cold, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G03270.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative USP1, Description = Adenine nucleotide alpha hydrolases-like superfamily protein, PFAM = PF00582)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf20924_190174-193455' '(at1g05260 : 287.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 237.0) no description available & (p37834|per1_orysa : 223.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 574.0) & (original description: Putative pa9, Description = Peroxidase, PFAM = PF00141)' T '20.2.2' 'stress.abiotic.cold' 'niben101scf37031_116869-121065' '(at3g55990 : 604.0) Encodes ESK1 (Eskimo1). A member of a large gene family of DUF231 domain proteins whose members encode a total of 45 proteins of unknown function. ESK1 functions as a negative regulator of cold acclimation. Mutations in the ESK1 gene provides strong freezing tolerance. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; ESKIMO 1 (ESK1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to freezing, positive regulation of transcription, response to cold; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 28 (TAIR:AT2G40150.1); Has 1336 Blast hits to 1309 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1334; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 187.0) no description available & (reliability: 1208.0) & (original description: Putative ESK1, Description = Protein ESKIMO 1, PFAM = PF14416;PF13839)' T '20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold5718_7825-10433' '(at2g41430 : 99.0) Encodes hydrophilic protein lacking Cys residues that is expressed in response to drought stress, light stress and treatment with plant-growth-promoting rhizobacteria (Paenibacillus polymyxa), possibly revealing a connection between responses to biotic and abiotic stress. Also identified as a CTC Interacting Domain (CID) protein in a yeast two hybrid screen using the PAB2 protein as bait. Contains PAM2 like domain which mediates interaction with PABC domain in PAB2.; EARLY RESPONSIVE TO DEHYDRATION 15 (ERD15); FUNCTIONS IN: protein binding; INVOLVED IN: response to water deprivation, response to high light intensity, response to bacterium; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14270.2). & (reliability: 198.0) & (original description: Putative ERD15, Description = Protein EARLY RESPONSIVE TO DEHYDRATION 15, PFAM = PF07145)' T '20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold7962_1-6637' '(at1g19430 : 823.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G64030.1); Has 8058 Blast hits to 6201 proteins in 616 species: Archae - 19; Bacteria - 712; Metazoa - 2431; Fungi - 867; Plants - 1254; Viruses - 124; Other Eukaryotes - 2651 (source: NCBI BLink). & (gnl|cdd|66793 : 621.0) no description available & (reliability: 1646.0) & (original description: Putative At1g19430, Description = Probable methyltransferase PMT28, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold10348_25864-43368' '(at5g19690 : 1168.0) encodes an oligosaccharyl transferase involved response to high salt. Mutants are hypersensitive to high salt conditions; staurosporin and temperature sensitive 3-like A (STT3A); FUNCTIONS IN: oligosaccharyl transferase activity; INVOLVED IN: response to salt stress; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharyl transferase, STT3 subunit (InterPro:IPR003674); BEST Arabidopsis thaliana protein match is: staurosporin and temperature sensitive 3-like b (TAIR:AT1G34130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37503 : 1050.0) no description available & (gnl|cdd|66228 : 377.0) no description available & (reliability: 2336.0) & (original description: Putative STT3A, Description = Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A, PFAM = PF02516)' T '20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold14653_22354-31896' '(at2g39750 : 979.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: Putative methyltransferase family protein (TAIR:AT5G06050.1); Has 1633 Blast hits to 1528 proteins in 174 species: Archae - 2; Bacteria - 140; Metazoa - 223; Fungi - 78; Plants - 1007; Viruses - 29; Other Eukaryotes - 154 (source: NCBI BLink). & (gnl|cdd|66793 : 798.0) no description available & (reliability: 1958.0) & (original description: Putative At2g39750, Description = Probable methyltransferase PMT11, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold20848_3578-13882' '(at1g26850 : 967.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: Golgi apparatus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G18030.1); Has 1039 Blast hits to 1012 proteins in 98 species: Archae - 0; Bacteria - 124; Metazoa - 0; Fungi - 0; Plants - 910; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66793 : 806.0) no description available & (reliability: 1934.0) & (original description: Putative At1g26850, Description = Probable methyltransferase PMT2, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold24691_3288-13464' '(at4g00740 : 966.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G10440.1); Has 1057 Blast hits to 1046 proteins in 101 species: Archae - 2; Bacteria - 148; Metazoa - 0; Fungi - 0; Plants - 904; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|66793 : 697.0) no description available & (reliability: 1932.0) & (original description: Putative At4g00740, Description = Probable methyltransferase PMT13, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold27862_4162-8752' '(gnl|cdd|69144 : 119.0) no description available & (at5g26990 : 94.4) Drought-responsive family protein; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT3G05700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative , Description = , PFAM = PF14571;PF05605)' T '20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold31491_1-4263' '(at4g00750 : 890.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G45750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66793 : 797.0) no description available & (reliability: 1780.0) & (original description: Putative At4g00750, Description = Probable methyltransferase PMT15, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold38883_717-13870' '(at1g60220 : 343.0) Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sGFP:OTS1 protein accumulates in the nucleus. Double mutant analysis with ULP1C/OTS2 indicates that these genes are involved in salt stress responses and flowering time regulation. Over-expression of 35S:OTS1 increases salt tolerance and reduces the level of SUMO-conjugated proteins. OTS1 transcript levels do not appear to change in response to salt, but, salt stress reduces the level of OTS1 protein in a proteasome-dependent manner.; UB-like protease 1D (ULP1D); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G10570.2); Has 2556 Blast hits to 2339 proteins in 246 species: Archae - 0; Bacteria - 12; Metazoa - 1276; Fungi - 441; Plants - 318; Viruses - 13; Other Eukaryotes - 496 (source: NCBI BLink). & (gnl|cdd|35998 : 162.0) no description available & (gnl|cdd|34761 : 119.0) no description available & (reliability: 686.0) & (original description: Putative OTS1, Description = Putative ulp1 protease, PFAM = PF02902)' T '20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold38883_4230-12047' '(at1g60220 : 181.0) Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sGFP:OTS1 protein accumulates in the nucleus. Double mutant analysis with ULP1C/OTS2 indicates that these genes are involved in salt stress responses and flowering time regulation. Over-expression of 35S:OTS1 increases salt tolerance and reduces the level of SUMO-conjugated proteins. OTS1 transcript levels do not appear to change in response to salt, but, salt stress reduces the level of OTS1 protein in a proteasome-dependent manner.; UB-like protease 1D (ULP1D); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G10570.2); Has 2556 Blast hits to 2339 proteins in 246 species: Archae - 0; Bacteria - 12; Metazoa - 1276; Fungi - 441; Plants - 318; Viruses - 13; Other Eukaryotes - 496 (source: NCBI BLink). & (gnl|cdd|35998 : 92.4) no description available & (gnl|cdd|34761 : 80.9) no description available & (reliability: 362.0) & (original description: Putative OTS1, Description = Ubiquitin-like-specific protease 1D, PFAM = PF02902)' T '20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold43192_3627-7924' '(gnl|cdd|66831 : 314.0) no description available & (at5g25610 : 277.0) responsive to dehydration 22 (RD22) mediated by ABA; RESPONSIVE TO DESSICATION 22 (RD22); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: unknown seed protein like 1 (TAIR:AT1G49320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p21745|ea30_vicfa : 119.0) Embryonic abundant protein VF30.1 precursor - Vicia faba (Broad bean) & (reliability: 554.0) & (original description: Putative RD22, Description = BURP domain protein RD22, PFAM = PF03181)' T '20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold50673_6078-12766' '(gnl|cdd|69144 : 219.0) no description available & (at5g49230 : 186.0) Identified in a screen for mutations hypersensitive to red and blue light. Mutants have shorter hypocotyls. Encodes a nuclear localized protein with similarity to drought induced proteins. Contains a ZZ zinc finger domain which is thought to mediate protein-protein interactions.May be involved in red and blue light signal transduction.; HYPERSENSITIVE TO RED AND BLUE (HRB1); CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT3G06760.1); Has 235 Blast hits to 235 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 235; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative DI19, Description = AtDi19-1, PFAM = PF05605;PF14571)' T '20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold63335_1-5789' '(at1g04430 : 1008.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G23300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66793 : 782.0) no description available & (reliability: 2016.0) & (original description: Putative At1g04430, Description = Probable methyltransferase PMT8, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold66987_2482-8512' '(gnl|cdd|69144 : 149.0) no description available & (at3g05700 : 130.0) Drought-responsive family protein; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT5G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative Di19, Description = Dehydration-induced 19-like protein, PFAM = PF14571;PF05605)' T '20.2.3' 'stress.abiotic.drought/salt' 'nbv0.3scaffold68098_493-9760' '(at1g60220 : 178.0) Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sGFP:OTS1 protein accumulates in the nucleus. Double mutant analysis with ULP1C/OTS2 indicates that these genes are involved in salt stress responses and flowering time regulation. Over-expression of 35S:OTS1 increases salt tolerance and reduces the level of SUMO-conjugated proteins. OTS1 transcript levels do not appear to change in response to salt, but, salt stress reduces the level of OTS1 protein in a proteasome-dependent manner.; UB-like protease 1D (ULP1D); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G10570.2); Has 2556 Blast hits to 2339 proteins in 246 species: Archae - 0; Bacteria - 12; Metazoa - 1276; Fungi - 441; Plants - 318; Viruses - 13; Other Eukaryotes - 496 (source: NCBI BLink). & (gnl|cdd|35998 : 89.7) no description available & (reliability: 356.0) & (original description: Putative OTS1, Description = Putative ulp1 protease, PFAM = PF02902)' T '20.2.3' 'stress.abiotic.drought/salt' 'nbv0.5scaffold386_183430-189791' '(at4g00750 : 880.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G45750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66793 : 794.0) no description available & (reliability: 1760.0) & (original description: Putative At4g10440, Description = Probable methyltransferase PMT17, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'nbv0.5scaffold718_184925-190438' '(at3g51070 : 508.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G64030.1); Has 136558 Blast hits to 66732 proteins in 2821 species: Archae - 360; Bacteria - 21192; Metazoa - 48559; Fungi - 12924; Plants - 6617; Viruses - 796; Other Eukaryotes - 46110 (source: NCBI BLink). & (gnl|cdd|66793 : 439.0) no description available & (reliability: 1016.0) & (original description: Putative MTR_8g093880, Description = Methyltransferase PMT26-like protein, putative, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'nbv0.5scaffold1022_482511-488270' '(at3g12360 : 747.0) Encodes a protein with an ankyrin motif and transmembrane domains that is involved in salt tolerance. Expressed throughout the plant and localized to the plasma membrane. Loss of function mutations show an increased tolerance to salt based on assaying seedling growth in the presence of salt. In the mutants, induction of genes required for production of reactive oxygen species is reduced suggesting that itn1 promotes ROS production.; INCREASED TOLERANCE TO NACL (ITN1); INVOLVED IN: response to salt stress; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G09550.1); Has 61607 Blast hits to 26705 proteins in 1191 species: Archae - 49; Bacteria - 5778; Metazoa - 28187; Fungi - 6605; Plants - 4929; Viruses - 594; Other Eukaryotes - 15465 (source: NCBI BLink). & (gnl|cdd|35729 : 112.0) no description available & (gnl|cdd|29261 : 93.2) no description available & (reliability: 1494.0) & (original description: Putative At3g12360, Description = Ankyrin repeat-containing protein At3g12360, PFAM = PF13962;PF12796;PF12796;PF00023)' T '20.2.3' 'stress.abiotic.drought/salt' 'nbv0.5scaffold2193_33073-78730' '(at1g60220 : 306.0) Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sGFP:OTS1 protein accumulates in the nucleus. Double mutant analysis with ULP1C/OTS2 indicates that these genes are involved in salt stress responses and flowering time regulation. Over-expression of 35S:OTS1 increases salt tolerance and reduces the level of SUMO-conjugated proteins. OTS1 transcript levels do not appear to change in response to salt, but, salt stress reduces the level of OTS1 protein in a proteasome-dependent manner.; UB-like protease 1D (ULP1D); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G10570.2); Has 2556 Blast hits to 2339 proteins in 246 species: Archae - 0; Bacteria - 12; Metazoa - 1276; Fungi - 441; Plants - 318; Viruses - 13; Other Eukaryotes - 496 (source: NCBI BLink). & (gnl|cdd|35998 : 138.0) no description available & (gnl|cdd|34761 : 117.0) no description available & (reliability: 612.0) & (original description: Putative OTS1, Description = Ubiquitin-like-specific protease 1D, PFAM = PF02902)' T '20.2.3' 'stress.abiotic.drought/salt' 'nbv0.5scaffold3256_113751-117401' '(at3g23300 : 354.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, plasma membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G14360.2); Has 1180 Blast hits to 1159 proteins in 67 species: Archae - 0; Bacteria - 68; Metazoa - 0; Fungi - 0; Plants - 1092; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|66793 : 285.0) no description available & (reliability: 708.0) & (original description: Putative erd3, Description = Quasimodo 3, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'nbv0.5scaffold3507_41812-57553' '(at3g54510 : 679.0) Early-responsive to dehydration stress protein (ERD4); LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: hypothetical protein 1 (TAIR:AT3G01100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36349 : 462.0) no description available & (gnl|cdd|66403 : 256.0) no description available & (reliability: 1358.0) & (original description: Putative At3g54510, Description = CSC1-like protein At3g54510, PFAM = PF13967;PF14703;PF02714;PF02714)' T '20.2.3' 'stress.abiotic.drought/salt' 'nbv0.5scaffold3894_16269-28514' '(gnl|cdd|69144 : 140.0) no description available & (at3g05700 : 87.4) Drought-responsive family protein; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT5G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative , Description = , PFAM = PF05605;PF14571)' T '20.2.3' 'stress.abiotic.drought/salt' 'nbv0.5scaffold4603_211234-217986' '(at3g10200 : 773.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04060.1); Has 1192 Blast hits to 1180 proteins in 187 species: Archae - 1; Bacteria - 301; Metazoa - 2; Fungi - 2; Plants - 876; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|66793 : 613.0) no description available & (reliability: 1546.0) & (original description: Putative At3g10200, Description = Probable methyltransferase PMT6, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'nbv0.5scaffold5750_55247-58712' '(at1g32090 : 280.0) early-responsive to dehydration stress protein (ERD4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1524 Blast hits to 1296 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 776; Plants - 431; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (gnl|cdd|36349 : 193.0) no description available & (gnl|cdd|66403 : 177.0) no description available & (reliability: 560.0) & (original description: Putative CSC1, Description = ERD (Early-responsive to dehydration stress) family protein, PFAM = PF02714;PF14703)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00002670ctg000_12978-22627' '(at4g22120 : 1070.0) ERD (early-responsive to dehydration stress) family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT4G04340.1). & (gnl|cdd|36349 : 777.0) no description available & (gnl|cdd|66403 : 445.0) no description available & (reliability: 2140.0) & (original description: Putative At3g21620, Description = CSC1-like protein At3g21620, PFAM = PF14703;PF02714;PF13967)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00004662ctg007_786-3394' '(at2g41430 : 100.0) Encodes hydrophilic protein lacking Cys residues that is expressed in response to drought stress, light stress and treatment with plant-growth-promoting rhizobacteria (Paenibacillus polymyxa), possibly revealing a connection between responses to biotic and abiotic stress. Also identified as a CTC Interacting Domain (CID) protein in a yeast two hybrid screen using the PAB2 protein as bait. Contains PAM2 like domain which mediates interaction with PABC domain in PAB2.; EARLY RESPONSIVE TO DEHYDRATION 15 (ERD15); FUNCTIONS IN: protein binding; INVOLVED IN: response to water deprivation, response to high light intensity, response to bacterium; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14270.2). & (reliability: 200.0) & (original description: Putative ERD15, Description = Protein EARLY RESPONSIVE TO DEHYDRATION 15, PFAM = PF07145)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00013037ctg002_4089-5864' '(at2g39750 : 182.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: Putative methyltransferase family protein (TAIR:AT5G06050.1); Has 1633 Blast hits to 1528 proteins in 174 species: Archae - 2; Bacteria - 140; Metazoa - 223; Fungi - 78; Plants - 1007; Viruses - 29; Other Eukaryotes - 154 (source: NCBI BLink). & (gnl|cdd|66793 : 99.2) no description available & (reliability: 364.0) & (original description: Putative At2g39750, Description = Methyltransferase PMT16, putative, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00013456ctg000_987-8280' '(at1g13860 : 837.0) Encodes QUASIMODO2 LIKE1 (QUL1), a paralog of QUASIMODO2 (QUA2). AT1G78240 (QUA2), AT1G13860 (QUL1) and AT2G03480 (QUL2) form a clade with a possible role in plant vasculature development.; QUASIMODO2 LIKE 1 (QUL1); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: QUASIMODO2 LIKE 2 (TAIR:AT2G03480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66793 : 444.0) no description available & (reliability: 1674.0) & (original description: Putative At1g13860, Description = Probable methyltransferase PMT4, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00022794ctg000_1-7509' '(at2g39750 : 1000.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: Putative methyltransferase family protein (TAIR:AT5G06050.1); Has 1633 Blast hits to 1528 proteins in 174 species: Archae - 2; Bacteria - 140; Metazoa - 223; Fungi - 78; Plants - 1007; Viruses - 29; Other Eukaryotes - 154 (source: NCBI BLink). & (gnl|cdd|66793 : 797.0) no description available & (reliability: 2000.0) & (original description: Putative At2g39750, Description = Probable methyltransferase PMT11, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00024822ctg001_3001-11373' '(at1g78240 : 973.0) Encodes TSD2 (TUMOROUS SHOOT DEVELOPMENT2), a putative methyltransferase with an essential role in cell adhesion and coordinated plant development.; TUMOROUS SHOOT DEVELOPMENT 2 (TSD2); FUNCTIONS IN: methyltransferase activity; INVOLVED IN: shoot development, homogalacturonan biosynthetic process, response to cytokinin stimulus, root development; LOCATED IN: Golgi apparatus; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: QUASIMODO2 LIKE 1 (TAIR:AT1G13860.3); Has 1228 Blast hits to 1207 proteins in 172 species: Archae - 9; Bacteria - 218; Metazoa - 0; Fungi - 44; Plants - 919; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|66793 : 470.0) no description available & (reliability: 1946.0) & (original description: Putative QUA2, Description = Probable pectin methyltransferase QUA2, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00026902ctg000_2408-8931' '(gnl|cdd|69144 : 141.0) no description available & (at3g05700 : 108.0) Drought-responsive family protein; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT5G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative , Description = , PFAM = PF05605;PF14571)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00027807ctg000_14433-21115' '(gnl|cdd|69144 : 112.0) no description available & (at5g26990 : 84.0) Drought-responsive family protein; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT3G05700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative , Description = , PFAM = PF14571;PF05605)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00028221ctg000_4814-12004' '(at4g02900 : 899.0) ERD (early-responsive to dehydration stress) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1474 Blast hits to 1292 proteins in 188 species: Archae - 0; Bacteria - 2; Metazoa - 189; Fungi - 715; Plants - 435; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|36349 : 623.0) no description available & (gnl|cdd|66403 : 308.0) no description available & (reliability: 1798.0) & (original description: Putative At1g11960, Description = CSC1-like protein At1g11960, PFAM = PF02714;PF14703;PF13967)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00029196ctg001_12553-17153' '(at4g00750 : 842.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G45750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66793 : 780.0) no description available & (reliability: 1684.0) & (original description: Putative At4g00750, Description = Probable methyltransferase PMT15, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00029270ctg004_7558-13206' '(at3g12360 : 675.0) Encodes a protein with an ankyrin motif and transmembrane domains that is involved in salt tolerance. Expressed throughout the plant and localized to the plasma membrane. Loss of function mutations show an increased tolerance to salt based on assaying seedling growth in the presence of salt. In the mutants, induction of genes required for production of reactive oxygen species is reduced suggesting that itn1 promotes ROS production.; INCREASED TOLERANCE TO NACL (ITN1); INVOLVED IN: response to salt stress; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G09550.1); Has 61607 Blast hits to 26705 proteins in 1191 species: Archae - 49; Bacteria - 5778; Metazoa - 28187; Fungi - 6605; Plants - 4929; Viruses - 594; Other Eukaryotes - 15465 (source: NCBI BLink). & (gnl|cdd|35728 : 99.7) no description available & (gnl|cdd|29261 : 94.0) no description available & (reliability: 1350.0) & (original description: Putative At3g12360, Description = Ankyrin repeat-containing protein At3g12360, PFAM = PF12796;PF12796;PF12796;PF13962)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00030432ctg009_1-7302' '(at1g32090 : 614.0) early-responsive to dehydration stress protein (ERD4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1524 Blast hits to 1296 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 776; Plants - 431; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (gnl|cdd|36349 : 425.0) no description available & (gnl|cdd|66403 : 179.0) no description available & (reliability: 1228.0) & (original description: Putative CSC1, Description = ERD (Early-responsive to dehydration stress) family protein, PFAM = PF02714;PF14703;PF13967)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00036998ctg000_4158-7413' '(at3g09550 : 340.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G12360.1); Has 55803 Blast hits to 24932 proteins in 1099 species: Archae - 58; Bacteria - 5470; Metazoa - 27318; Fungi - 5824; Plants - 4263; Viruses - 331; Other Eukaryotes - 12539 (source: NCBI BLink). & (gnl|cdd|35729 : 95.1) no description available & (gnl|cdd|29261 : 92.5) no description available & (reliability: 650.0) & (original description: Putative IGN1, Description = Ankyrin repeat-containing protein, PFAM = PF12796;PF12796)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00038165ctg006_1-2688' '(at1g32090 : 283.0) early-responsive to dehydration stress protein (ERD4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1524 Blast hits to 1296 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 776; Plants - 431; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (gnl|cdd|36349 : 191.0) no description available & (gnl|cdd|66403 : 175.0) no description available & (reliability: 566.0) & (original description: Putative CSC1, Description = ERD (Early-responsive to dehydration stress) family protein, PFAM = PF14703;PF02714)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00039094ctg006_1699-10033' '(at1g60220 : 179.0) Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sGFP:OTS1 protein accumulates in the nucleus. Double mutant analysis with ULP1C/OTS2 indicates that these genes are involved in salt stress responses and flowering time regulation. Over-expression of 35S:OTS1 increases salt tolerance and reduces the level of SUMO-conjugated proteins. OTS1 transcript levels do not appear to change in response to salt, but, salt stress reduces the level of OTS1 protein in a proteasome-dependent manner.; UB-like protease 1D (ULP1D); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G10570.2); Has 2556 Blast hits to 2339 proteins in 246 species: Archae - 0; Bacteria - 12; Metazoa - 1276; Fungi - 441; Plants - 318; Viruses - 13; Other Eukaryotes - 496 (source: NCBI BLink). & (gnl|cdd|35998 : 89.3) no description available & (reliability: 358.0) & (original description: Putative OTS1, Description = Putative ulp1 protease, PFAM = PF02902)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00041131ctg005_486-6516' '(at1g23010 : 772.0) Encodes a protein with multicopper oxidase activity. Located in ER. Function together with LPR2 (AT1G71040) and a P5-type ATPase (At5g23630/PDR2) in a common pathway that adjusts root meristem activity to Pi (inorganic phosphate) availability.; Low Phosphate Root1 (LPR1); CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G71040.1); Has 3143 Blast hits to 2693 proteins in 814 species: Archae - 12; Bacteria - 2669; Metazoa - 8; Fungi - 64; Plants - 261; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|32315 : 141.0) no description available & (reliability: 1520.0) & (original description: Putative LPR1, Description = Multicopper oxidase LPR1, PFAM = PF00394;PF07732;PF07731)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00043131ctg003_5666-17338' '(at4g22120 : 1074.0) ERD (early-responsive to dehydration stress) family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT4G04340.1). & (gnl|cdd|36349 : 785.0) no description available & (gnl|cdd|66403 : 455.0) no description available & (reliability: 2148.0) & (original description: Putative CSC1, Description = Calcium permeable stress-gated cation channel 1, PFAM = PF13967;PF14703;PF02714)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00052811ctg002_1-2876' '(at3g23300 : 351.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, plasma membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G14360.2); Has 1180 Blast hits to 1159 proteins in 67 species: Archae - 0; Bacteria - 68; Metazoa - 0; Fungi - 0; Plants - 1092; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|66793 : 282.0) no description available & (reliability: 702.0) & (original description: Putative erd3, Description = Quasimodo 3, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben044scf00055635ctg003_449-6103' '(at3g51070 : 899.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G64030.1); Has 136558 Blast hits to 66732 proteins in 2821 species: Archae - 360; Bacteria - 21192; Metazoa - 48559; Fungi - 12924; Plants - 6617; Viruses - 796; Other Eukaryotes - 46110 (source: NCBI BLink). & (gnl|cdd|66793 : 802.0) no description available & (reliability: 1798.0) & (original description: Putative At3g51070, Description = Probable methyltransferase PMT27, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf00017_308988-315998' '(at5g64030 : 1006.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G29470.2); Has 79879 Blast hits to 39720 proteins in 2025 species: Archae - 377; Bacteria - 14382; Metazoa - 24757; Fungi - 8186; Plants - 4300; Viruses - 653; Other Eukaryotes - 27224 (source: NCBI BLink). & (gnl|cdd|66793 : 795.0) no description available & (reliability: 2012.0) & (original description: Putative At5g64030, Description = Probable methyltransferase PMT26, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf00133_476483-483567' '(at3g56080 : 482.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G40280.1); Has 1162 Blast hits to 1119 proteins in 165 species: Archae - 0; Bacteria - 246; Metazoa - 1; Fungi - 5; Plants - 904; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|66793 : 458.0) no description available & (reliability: 964.0) & (original description: Putative At1g29470, Description = Putative methyltransferase PMT26, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf00133_478273-483872' '(at3g56080 : 748.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G40280.1); Has 1162 Blast hits to 1119 proteins in 165 species: Archae - 0; Bacteria - 246; Metazoa - 1; Fungi - 5; Plants - 904; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|66793 : 710.0) no description available & (reliability: 1496.0) & (original description: Putative At3g56080, Description = Probable methyltransferase PMT22, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf00246_16696-19825' '(at5g62520 : 134.0) Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.; similar to RCD one 5 (SRO5); FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity; INVOLVED IN: oxygen and reactive oxygen species metabolic process, response to salt stress; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317); BEST Arabidopsis thaliana protein match is: similar to RCD one 4 (TAIR:AT3G47720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative PGSC0003DMG400024600, Description = , PFAM = PF12174)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf00272_889774-895969' '(at1g26850 : 1012.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: Golgi apparatus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G18030.1); Has 1039 Blast hits to 1012 proteins in 98 species: Archae - 0; Bacteria - 124; Metazoa - 0; Fungi - 0; Plants - 910; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66793 : 784.0) no description available & (reliability: 2024.0) & (original description: Putative At1g26850, Description = Probable methyltransferase PMT2, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf00358_30658-37726' '(at1g77260 : 798.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G39750.1); Has 919 Blast hits to 909 proteins in 49 species: Archae - 0; Bacteria - 17; Metazoa - 3; Fungi - 4; Plants - 891; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|66793 : 696.0) no description available & (reliability: 1596.0) & (original description: Putative At1g77260, Description = Probable methyltransferase PMT10, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf00501_547622-552971' '(at1g04430 : 997.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G23300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66793 : 788.0) no description available & (reliability: 1994.0) & (original description: Putative At1g04430, Description = Probable methyltransferase PMT8, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf00592_5733-11049' '(at2g18250 : 242.0) At2g18250 encodes pantetheine-phosphate adenylyltransferase catalyzing the formation of dephospho-CoA from pantetheine 4'-phosphate. The enzyme is involved in coenzyme A biosynthesis.; 4-phosphopantetheine adenylyltransferase (COAD); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); Has 633 Blast hits to 630 proteins in 285 species: Archae - 179; Bacteria - 4; Metazoa - 125; Fungi - 130; Plants - 59; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (gnl|cdd|38561 : 199.0) no description available & (gnl|cdd|28826 : 193.0) no description available & (reliability: 484.0) & (original description: Putative COAD, Description = Phosphopantetheine adenylyltransferase, PFAM = PF01467)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf00635_729794-735879' '(at1g13860 : 850.0) Encodes QUASIMODO2 LIKE1 (QUL1), a paralog of QUASIMODO2 (QUA2). AT1G78240 (QUA2), AT1G13860 (QUL1) and AT2G03480 (QUL2) form a clade with a possible role in plant vasculature development.; QUASIMODO2 LIKE 1 (QUL1); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: QUASIMODO2 LIKE 2 (TAIR:AT2G03480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66793 : 445.0) no description available & (reliability: 1700.0) & (original description: Putative At1g13860, Description = Probable methyltransferase PMT4, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf00821_1291272-1296746' '(at4g00750 : 845.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G45750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66793 : 779.0) no description available & (reliability: 1690.0) & (original description: Putative At4g00750, Description = Probable methyltransferase PMT15, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf00966_443954-450661' '(at1g26850 : 1027.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: Golgi apparatus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G18030.1); Has 1039 Blast hits to 1012 proteins in 98 species: Archae - 0; Bacteria - 124; Metazoa - 0; Fungi - 0; Plants - 910; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66793 : 801.0) no description available & (reliability: 2054.0) & (original description: Putative At1g26850, Description = Probable methyltransferase PMT2, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf01013_422681-429441' '(at1g04430 : 1015.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G23300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66793 : 782.0) no description available & (reliability: 2030.0) & (original description: Putative At1g04430, Description = Probable methyltransferase PMT8, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf01062_183671-194273' '(at4g30660 : 80.9) Low temperature and salt responsive protein family; INVOLVED IN: response to cold, hyperosmotic salinity response; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0057 (InterPro:IPR000612); BEST Arabidopsis thaliana protein match is: Low temperature and salt responsive protein family (TAIR:AT2G24040.1); Has 1255 Blast hits to 1255 proteins in 413 species: Archae - 0; Bacteria - 524; Metazoa - 40; Fungi - 292; Plants - 377; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative OSR8, Description = Low temperature and salt responsive family protein, PFAM = PF01679)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf01062_221556-235893' '(at4g28088 : 85.1) Low temperature and salt responsive protein family; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0057 (InterPro:IPR000612); BEST Arabidopsis thaliana protein match is: Low temperature and salt responsive protein family (TAIR:AT2G24040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative At4g30660, Description = UPF0057 membrane protein At4g30660, PFAM = PF01679)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf01145_127517-132652' '(at1g31850 : 998.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G19120.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66793 : 722.0) no description available & (reliability: 1996.0) & (original description: Putative At1g31850, Description = Probable methyltransferase PMT20, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf01509_62812-69509' '(at4g02900 : 903.0) ERD (early-responsive to dehydration stress) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1474 Blast hits to 1292 proteins in 188 species: Archae - 0; Bacteria - 2; Metazoa - 189; Fungi - 715; Plants - 435; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|36349 : 625.0) no description available & (gnl|cdd|66403 : 307.0) no description available & (reliability: 1806.0) & (original description: Putative At1g11960, Description = CSC1-like protein At1g11960, PFAM = PF02714;PF14703;PF13967)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf01583_76073-82282' '(at4g18030 : 974.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, plasma membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G26850.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66793 : 782.0) no description available & (reliability: 1948.0) & (original description: Putative At4g18030, Description = Probable methyltransferase PMT14, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf01623_613103-619133' '(gnl|cdd|69144 : 148.0) no description available & (at3g05700 : 130.0) Drought-responsive family protein; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT5G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative Di19, Description = Dehydration-induced 19-like protein, PFAM = PF05605;PF14571)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf01689_455998-463809' '(at3g62730 : 339.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47980.1); Has 172 Blast hits to 172 proteins in 41 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 678.0) & (original description: Putative At1g47980, Description = Desiccation-related protein PCC13-62, PFAM = PF13668)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf01764_253780-258235' '(at5g62520 : 241.0) Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.; similar to RCD one 5 (SRO5); FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity; INVOLVED IN: oxygen and reactive oxygen species metabolic process, response to salt stress; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317); BEST Arabidopsis thaliana protein match is: similar to RCD one 4 (TAIR:AT3G47720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative SRO5, Description = Probable inactive poly [ADP-ribose] polymerase SRO5, PFAM = PF12174)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf01899_212112-217263' '(at1g30360 : 705.0) early-responsive to dehydration 4 (ERD4); INVOLVED IN: response to water deprivation; LOCATED IN: plasma membrane, chloroplast, vacuole, membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT4G02900.1); Has 1361 Blast hits to 1266 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 183; Fungi - 651; Plants - 396; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|36349 : 467.0) no description available & (gnl|cdd|35153 : 266.0) no description available & (reliability: 1410.0) & (original description: Putative ERD4, Description = CSC1-like protein ERD4, PFAM = PF13967;PF14703;PF02714)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf01961_391942-397473' '(at4g04340 : 392.0) ERD (early-responsive to dehydration stress) family protein; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT4G22120.6); Has 1468 Blast hits to 1288 proteins in 193 species: Archae - 0; Bacteria - 4; Metazoa - 185; Fungi - 720; Plants - 437; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|36349 : 258.0) no description available & (gnl|cdd|66403 : 241.0) no description available & (reliability: 784.0) & (original description: Putative CSC1, Description = ERD (Early-responsive to dehydration stress) family protein, PFAM = PF02714)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf02105_357140-360193' '(at3g18030 : 336.0) flavin mononucleotide flavoprotein involved in salt and osmotic tolerance HAL3A encodes for phosphopantothenoylcysteine decarboxylase being involved in Coenzyme A biosynthesis. HAL3A is predominant over another gene with the presumably same function (HAL3B).; HAL3-like protein A (HAL3A); CONTAINS InterPro DOMAIN/s: Flavoprotein (InterPro:IPR003382); BEST Arabidopsis thaliana protein match is: Flavoprotein (TAIR:AT1G48605.1); Has 7047 Blast hits to 7045 proteins in 2495 species: Archae - 186; Bacteria - 4343; Metazoa - 125; Fungi - 269; Plants - 90; Viruses - 5; Other Eukaryotes - 2029 (source: NCBI BLink). & (gnl|cdd|35891 : 250.0) no description available & (gnl|cdd|81644 : 160.0) no description available & (reliability: 672.0) & (original description: Putative HAL3A, Description = Phosphopantothenoylcysteine decarboxylase, PFAM = PF02441)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf02111_33953-41907' '(gnl|cdd|69144 : 223.0) no description available & (at5g49230 : 194.0) Identified in a screen for mutations hypersensitive to red and blue light. Mutants have shorter hypocotyls. Encodes a nuclear localized protein with similarity to drought induced proteins. Contains a ZZ zinc finger domain which is thought to mediate protein-protein interactions.May be involved in red and blue light signal transduction.; HYPERSENSITIVE TO RED AND BLUE (HRB1); CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT3G06760.1); Has 235 Blast hits to 235 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 235; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative DI19, Description = AtDi19-1, PFAM = PF14571;PF05605)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf02299_176001-182702' '(at1g30360 : 803.0) early-responsive to dehydration 4 (ERD4); INVOLVED IN: response to water deprivation; LOCATED IN: plasma membrane, chloroplast, vacuole, membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT4G02900.1); Has 1361 Blast hits to 1266 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 183; Fungi - 651; Plants - 396; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|36349 : 513.0) no description available & (gnl|cdd|35153 : 296.0) no description available & (reliability: 1606.0) & (original description: Putative ERD4, Description = CSC1-like protein ERD4, PFAM = PF13967;PF02714;PF14703)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf02319_1326009-1330638' '(gnl|cdd|66831 : 313.0) no description available & (at5g25610 : 278.0) responsive to dehydration 22 (RD22) mediated by ABA; RESPONSIVE TO DESSICATION 22 (RD22); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: unknown seed protein like 1 (TAIR:AT1G49320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p21745|ea30_vicfa : 118.0) Embryonic abundant protein VF30.1 precursor - Vicia faba (Broad bean) & (reliability: 556.0) & (original description: Putative RD22, Description = BURP domain protein RD22, PFAM = PF03181)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf02398_128020-132277' '(at1g23550 : 213.0) Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation.; similar to RCD one 2 (SRO2); FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: similar to RCD one 3 (TAIR:AT1G70440.1); Has 178 Blast hits to 169 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative SRO2, Description = Probable inactive poly [ADP-ribose] polymerase SRO2, PFAM = PF12174;PF00644)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf02639_333441-349909' '(at3g12360 : 767.0) Encodes a protein with an ankyrin motif and transmembrane domains that is involved in salt tolerance. Expressed throughout the plant and localized to the plasma membrane. Loss of function mutations show an increased tolerance to salt based on assaying seedling growth in the presence of salt. In the mutants, induction of genes required for production of reactive oxygen species is reduced suggesting that itn1 promotes ROS production.; INCREASED TOLERANCE TO NACL (ITN1); INVOLVED IN: response to salt stress; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G09550.1); Has 61607 Blast hits to 26705 proteins in 1191 species: Archae - 49; Bacteria - 5778; Metazoa - 28187; Fungi - 6605; Plants - 4929; Viruses - 594; Other Eukaryotes - 15465 (source: NCBI BLink). & (gnl|cdd|35729 : 113.0) no description available & (gnl|cdd|29261 : 95.5) no description available & (reliability: 1534.0) & (original description: Putative At3g12360, Description = Ankyrin repeat-containing protein At3g12360, PFAM = PF12796;PF12796;PF13962;PF00023)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf02772_247600-250531' '(gnl|cdd|87067 : 318.0) no description available & (at3g25780 : 244.0) Encodes allene oxide cyclase, one of the enzymes involved in jasmonic acid biosynthesis. One of four genes in Arabidopsis that encode this enzyme. mRNA expression is upregulated in senescing leaves. Note: Nomenclature for Arabidopsis allene oxide cyclase 3 (AOC3, AT3G25780) gene is based on Stenzel et al. 2003 Plant Molecular Biology 51:895-911. AOC3 (AT3G25780) is also referred to as AOC2 in He et al. 2002 Plant Physiology, 128:876-884.; allene oxide cyclase 3 (AOC3); FUNCTIONS IN: allene-oxide cyclase activity; INVOLVED IN: response to salt stress, response to fungus, jasmonic acid biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Allene oxide cyclase (InterPro:IPR009410); BEST Arabidopsis thaliana protein match is: allene oxide cyclase 2 (TAIR:AT3G25770.1); Has 202 Blast hits to 202 proteins in 32 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 198; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative aoc, Description = Allene oxide cyclase, PFAM = PF06351)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf02942_5454-17482' '(at3g01100 : 843.0) unknown protein, has cDNAs and ESTs associated to it; hypothetical protein 1 (HYP1); LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: Early-responsive to dehydration stress protein (ERD4) (TAIR:AT1G69450.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36349 : 536.0) no description available & (gnl|cdd|66403 : 351.0) no description available & (reliability: 1686.0) & (original description: Putative HYP1, Description = CSC1-like protein HYP1, PFAM = PF02714;PF13967;PF14703)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf02945_132015-139464' '(gnl|cdd|69144 : 234.0) no description available & (at3g06760 : 186.0) Drought-responsive family protein; INVOLVED IN: response to water deprivation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT5G49230.1); Has 224 Blast hits to 224 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative DI19, Description = AtDi19-1, PFAM = PF14571;PF05605)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf02953_190960-202162' '(at4g22120 : 1094.0) ERD (early-responsive to dehydration stress) family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT4G04340.1). & (gnl|cdd|36349 : 781.0) no description available & (gnl|cdd|66403 : 453.0) no description available & (reliability: 2188.0) & (original description: Putative CSC1, Description = Calcium permeable stress-gated cation channel 1, PFAM = PF13967;PF14703;PF02714)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf02994_286039-293393' '(at1g23010 : 784.0) Encodes a protein with multicopper oxidase activity. Located in ER. Function together with LPR2 (AT1G71040) and a P5-type ATPase (At5g23630/PDR2) in a common pathway that adjusts root meristem activity to Pi (inorganic phosphate) availability.; Low Phosphate Root1 (LPR1); CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G71040.1); Has 3143 Blast hits to 2693 proteins in 814 species: Archae - 12; Bacteria - 2669; Metazoa - 8; Fungi - 64; Plants - 261; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|32315 : 142.0) no description available & (reliability: 1552.0) & (original description: Putative LPR1, Description = Multicopper oxidase LPR1, PFAM = PF00394;PF07731;PF07732)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf03159_34430-42066' '(at4g00750 : 906.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G45750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66793 : 781.0) no description available & (reliability: 1812.0) & (original description: Putative At4g00750, Description = Probable methyltransferase PMT15, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf03221_116948-125347' '(at1g34130 : 1165.0) Encodes homolog of yeast STT3, a subunit of oligosaccharyltransferase.; staurosporin and temperature sensitive 3-like b (STT3B); FUNCTIONS IN: oligosaccharyl transferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharyl transferase, STT3 subunit (InterPro:IPR003674); BEST Arabidopsis thaliana protein match is: staurosporin and temperature sensitive 3-like A (TAIR:AT5G19690.1); Has 1054 Blast hits to 1026 proteins in 313 species: Archae - 251; Bacteria - 48; Metazoa - 304; Fungi - 138; Plants - 87; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (gnl|cdd|37503 : 1114.0) no description available & (gnl|cdd|66228 : 420.0) no description available & (reliability: 2330.0) & (original description: Putative STT3B, Description = Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B, PFAM = PF02516)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf03283_166009-175239' '(at3g10200 : 878.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04060.1); Has 1192 Blast hits to 1180 proteins in 187 species: Archae - 1; Bacteria - 301; Metazoa - 2; Fungi - 2; Plants - 876; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|66793 : 678.0) no description available & (reliability: 1756.0) & (original description: Putative At3g10200, Description = Probable methyltransferase PMT6, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf03563_110904-121385' '(at4g22120 : 1074.0) ERD (early-responsive to dehydration stress) family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT4G04340.1). & (gnl|cdd|36349 : 779.0) no description available & (gnl|cdd|66403 : 445.0) no description available & (reliability: 2148.0) & (original description: Putative CSC1, Description = Calcium permeable stress-gated cation channel 1, PFAM = PF13967;PF14703;PF02714)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf03816_338975-343780' '(gnl|cdd|69144 : 121.0) no description available & (at1g56280 : 87.0) Encodes a gene whose transcript level in root and leaves increases to progressive drought stress. The increase in transcript level is independent from abscisic acid level. Sequence is not similar to any protein of known function. It appears to be a member of plant-specific gene family. It's phosphorylated by AtCPK11 in a Ca(2+)-dependent manner at Thr105 and Ser107 within the AtDi19 bipartite nuclear localization signal; drought-induced 19; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT3G05700.1). & (reliability: 174.0) & (original description: Putative , Description = , PFAM = PF05605;PF14571)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf03894_572513-577377' '(at4g10440 : 922.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G33170.1); Has 1162 Blast hits to 1152 proteins in 127 species: Archae - 5; Bacteria - 186; Metazoa - 0; Fungi - 2; Plants - 957; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|66793 : 779.0) no description available & (reliability: 1844.0) & (original description: Putative At1g33170, Description = Probable methyltransferase PMT18, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf03971_114742-121195' '(at2g03480 : 817.0) Encodes QUASIMODO2 LIKE2 (QUL2), a paralog of QUASIMODO2 (QUA2). AT1G78240 (QUA2), AT1G13860 (QUL1) and AT2G03480 (QUL2) form a clade with a possible role in plant vasculature development.; QUASIMODO2 LIKE 2 (QUL2); LOCATED IN: mitochondrion; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: QUASIMODO2 LIKE 1 (TAIR:AT1G13860.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66793 : 426.0) no description available & (reliability: 1634.0) & (original description: Putative OSU1, Description = Putative S-adenosyl-L-methionine-dependent methyltransferase, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf04038_403408-406411' '(at2g41430 : 100.0) Encodes hydrophilic protein lacking Cys residues that is expressed in response to drought stress, light stress and treatment with plant-growth-promoting rhizobacteria (Paenibacillus polymyxa), possibly revealing a connection between responses to biotic and abiotic stress. Also identified as a CTC Interacting Domain (CID) protein in a yeast two hybrid screen using the PAB2 protein as bait. Contains PAM2 like domain which mediates interaction with PABC domain in PAB2.; EARLY RESPONSIVE TO DEHYDRATION 15 (ERD15); FUNCTIONS IN: protein binding; INVOLVED IN: response to water deprivation, response to high light intensity, response to bacterium; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14270.2). & (reliability: 200.0) & (original description: Putative ERD15, Description = Protein EARLY RESPONSIVE TO DEHYDRATION 15, PFAM = PF07145)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf04400_272409-279560' '(at1g13860 : 838.0) Encodes QUASIMODO2 LIKE1 (QUL1), a paralog of QUASIMODO2 (QUA2). AT1G78240 (QUA2), AT1G13860 (QUL1) and AT2G03480 (QUL2) form a clade with a possible role in plant vasculature development.; QUASIMODO2 LIKE 1 (QUL1); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: QUASIMODO2 LIKE 2 (TAIR:AT2G03480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66793 : 422.0) no description available & (reliability: 1676.0) & (original description: Putative At1g13860, Description = Probable methyltransferase PMT4, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf04411_221796-224430' '(at2g41430 : 111.0) Encodes hydrophilic protein lacking Cys residues that is expressed in response to drought stress, light stress and treatment with plant-growth-promoting rhizobacteria (Paenibacillus polymyxa), possibly revealing a connection between responses to biotic and abiotic stress. Also identified as a CTC Interacting Domain (CID) protein in a yeast two hybrid screen using the PAB2 protein as bait. Contains PAM2 like domain which mediates interaction with PABC domain in PAB2.; EARLY RESPONSIVE TO DEHYDRATION 15 (ERD15); FUNCTIONS IN: protein binding; INVOLVED IN: response to water deprivation, response to high light intensity, response to bacterium; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14270.2). & (reliability: 222.0) & (original description: Putative ERD15, Description = Protein EARLY RESPONSIVE TO DEHYDRATION 15, PFAM = PF07145)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf04592_11357-14970' '(gnl|cdd|66831 : 235.0) no description available & (at5g25610 : 186.0) responsive to dehydration 22 (RD22) mediated by ABA; RESPONSIVE TO DESSICATION 22 (RD22); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: unknown seed protein like 1 (TAIR:AT1G49320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p21745|ea30_vicfa : 101.0) Embryonic abundant protein VF30.1 precursor - Vicia faba (Broad bean) & (reliability: 372.0) & (original description: Putative rd22c, Description = RD22, PFAM = PF03181)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf04610_741876-751942' '(at1g19430 : 826.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G64030.1); Has 8058 Blast hits to 6201 proteins in 616 species: Archae - 19; Bacteria - 712; Metazoa - 2431; Fungi - 867; Plants - 1254; Viruses - 124; Other Eukaryotes - 2651 (source: NCBI BLink). & (gnl|cdd|66793 : 616.0) no description available & (reliability: 1652.0) & (original description: Putative At1g19430, Description = Probable methyltransferase PMT28, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf04701_287425-299216' '(at1g32090 : 958.0) early-responsive to dehydration stress protein (ERD4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1524 Blast hits to 1296 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 776; Plants - 431; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (gnl|cdd|36349 : 675.0) no description available & (gnl|cdd|66403 : 402.0) no description available & (reliability: 1916.0) & (original description: Putative At1g32090, Description = CSC1-like protein At1g32090, PFAM = PF02714;PF13967;PF14703)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf04701_290965-294434' '(at1g32090 : 259.0) early-responsive to dehydration stress protein (ERD4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1524 Blast hits to 1296 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 776; Plants - 431; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (gnl|cdd|36349 : 195.0) no description available & (gnl|cdd|66403 : 169.0) no description available & (reliability: 518.0) & (original description: Putative CSC1, Description = ERD (Early-responsive to dehydration stress) family protein, PFAM = PF02714;PF14703)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf04776_72176-80284' '(at4g02900 : 1072.0) ERD (early-responsive to dehydration stress) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1474 Blast hits to 1292 proteins in 188 species: Archae - 0; Bacteria - 2; Metazoa - 189; Fungi - 715; Plants - 435; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|36349 : 752.0) no description available & (gnl|cdd|66403 : 408.0) no description available & (reliability: 2144.0) & (original description: Putative At4g02900, Description = CSC1-like protein At4g02900, PFAM = PF14703;PF13967;PF02714)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf05034_230857-236697' '(at4g00750 : 884.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G45750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66793 : 792.0) no description available & (reliability: 1768.0) & (original description: Putative At4g00750, Description = Probable methyltransferase PMT15, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf05062_183881-190564' '(at5g64030 : 998.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G29470.2); Has 79879 Blast hits to 39720 proteins in 2025 species: Archae - 377; Bacteria - 14382; Metazoa - 24757; Fungi - 8186; Plants - 4300; Viruses - 653; Other Eukaryotes - 27224 (source: NCBI BLink). & (gnl|cdd|66793 : 787.0) no description available & (reliability: 1996.0) & (original description: Putative At5g64030, Description = Probable methyltransferase PMT26, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf05553_126143-139621' '(at1g78240 : 943.0) Encodes TSD2 (TUMOROUS SHOOT DEVELOPMENT2), a putative methyltransferase with an essential role in cell adhesion and coordinated plant development.; TUMOROUS SHOOT DEVELOPMENT 2 (TSD2); FUNCTIONS IN: methyltransferase activity; INVOLVED IN: shoot development, homogalacturonan biosynthetic process, response to cytokinin stimulus, root development; LOCATED IN: Golgi apparatus; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: QUASIMODO2 LIKE 1 (TAIR:AT1G13860.3); Has 1228 Blast hits to 1207 proteins in 172 species: Archae - 9; Bacteria - 218; Metazoa - 0; Fungi - 44; Plants - 919; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|66793 : 472.0) no description available & (reliability: 1886.0) & (original description: Putative QUA2, Description = Probable pectin methyltransferase QUA2, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf05574_204296-212776' '(at2g39750 : 996.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: Putative methyltransferase family protein (TAIR:AT5G06050.1); Has 1633 Blast hits to 1528 proteins in 174 species: Archae - 2; Bacteria - 140; Metazoa - 223; Fungi - 78; Plants - 1007; Viruses - 29; Other Eukaryotes - 154 (source: NCBI BLink). & (gnl|cdd|66793 : 795.0) no description available & (reliability: 1992.0) & (original description: Putative At2g39750, Description = Probable methyltransferase PMT11, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf05955_48296-69092' '(at3g54510 : 740.0) Early-responsive to dehydration stress protein (ERD4); LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: hypothetical protein 1 (TAIR:AT3G01100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36349 : 511.0) no description available & (gnl|cdd|66403 : 292.0) no description available & (reliability: 1480.0) & (original description: Putative At3g54510, Description = CSC1-like protein At3g54510, PFAM = PF13967;PF14703;PF02714)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf06200_235603-248066' '(gnl|cdd|69144 : 140.0) no description available & (at3g05700 : 87.4) Drought-responsive family protein; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT5G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative , Description = , PFAM = PF14571;PF05605)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf06509_649715-671048' '(at5g19690 : 1158.0) encodes an oligosaccharyl transferase involved response to high salt. Mutants are hypersensitive to high salt conditions; staurosporin and temperature sensitive 3-like A (STT3A); FUNCTIONS IN: oligosaccharyl transferase activity; INVOLVED IN: response to salt stress; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharyl transferase, STT3 subunit (InterPro:IPR003674); BEST Arabidopsis thaliana protein match is: staurosporin and temperature sensitive 3-like b (TAIR:AT1G34130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37503 : 1054.0) no description available & (gnl|cdd|66228 : 380.0) no description available & (reliability: 2316.0) & (original description: Putative STT3A, Description = Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A, PFAM = PF02516)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf06613_61836-64989' '(at3g62730 : 326.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47980.1); Has 172 Blast hits to 172 proteins in 41 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 652.0) & (original description: Putative Sb01g035570, Description = Putative uncharacterized protein Sb01g035570, PFAM = PF13668)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf06996_146296-154823' '(gnl|cdd|69144 : 248.0) no description available & (at3g05700 : 208.0) Drought-responsive family protein; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT5G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 416.0) & (original description: Putative DI19, Description = AtDi19-1, PFAM = PF05605;PF14571)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf07034_415680-422370' '(at3g51070 : 894.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G64030.1); Has 136558 Blast hits to 66732 proteins in 2821 species: Archae - 360; Bacteria - 21192; Metazoa - 48559; Fungi - 12924; Plants - 6617; Viruses - 796; Other Eukaryotes - 46110 (source: NCBI BLink). & (gnl|cdd|66793 : 802.0) no description available & (reliability: 1788.0) & (original description: Putative At3g51070, Description = Probable methyltransferase PMT27, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf07223_443793-448565' '(at3g09550 : 752.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G12360.1); Has 55803 Blast hits to 24932 proteins in 1099 species: Archae - 58; Bacteria - 5470; Metazoa - 27318; Fungi - 5824; Plants - 4263; Viruses - 331; Other Eukaryotes - 12539 (source: NCBI BLink). & (gnl|cdd|35729 : 112.0) no description available & (gnl|cdd|29261 : 94.8) no description available & (reliability: 1452.0) & (original description: Putative At3g12360, Description = Ankyrin repeat-containing protein At3g12360, PFAM = PF13962;PF00023;PF12796;PF12796)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf08724_443753-456238' '(at1g26850 : 987.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: Golgi apparatus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G18030.1); Has 1039 Blast hits to 1012 proteins in 98 species: Archae - 0; Bacteria - 124; Metazoa - 0; Fungi - 0; Plants - 910; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66793 : 808.0) no description available & (reliability: 1974.0) & (original description: Putative At1g26850, Description = Probable methyltransferase PMT2, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf09467_144208-153459' '(at5g64030 : 925.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G29470.2); Has 79879 Blast hits to 39720 proteins in 2025 species: Archae - 377; Bacteria - 14382; Metazoa - 24757; Fungi - 8186; Plants - 4300; Viruses - 653; Other Eukaryotes - 27224 (source: NCBI BLink). & (gnl|cdd|66793 : 774.0) no description available & (reliability: 1850.0) & (original description: Putative At2g40280, Description = Probable methyltransferase PMT23, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf09638_89266-94028' '(at4g19120 : 991.0) early-responsive to dehydration 3 (ERD3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G31850.2); Has 1146 Blast hits to 1130 proteins in 105 species: Archae - 6; Bacteria - 157; Metazoa - 0; Fungi - 3; Plants - 960; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|66793 : 722.0) no description available & (reliability: 1982.0) & (original description: Putative ERD3, Description = Probable methyltransferase PMT21, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf09648_372418-378033' '(gnl|cdd|69144 : 155.0) no description available & (at3g05700 : 131.0) Drought-responsive family protein; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT5G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative Di19, Description = Dehydration-induced 19-like protein, PFAM = PF14571;PF05605)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf09788_38748-43466' '(gnl|cdd|69144 : 127.0) no description available & (at3g05700 : 85.5) Drought-responsive family protein; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT5G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative , Description = , PFAM = PF14571;PF05605)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf10169_503188-509841' '(at2g40280 : 800.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G56080.1); Has 1258 Blast hits to 1230 proteins in 178 species: Archae - 2; Bacteria - 211; Metazoa - 31; Fungi - 46; Plants - 944; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|66793 : 724.0) no description available & (reliability: 1600.0) & (original description: Putative At2g40280, Description = Probable methyltransferase PMT23, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf10448_151746-159334' '(at4g18030 : 965.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, plasma membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G26850.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66793 : 781.0) no description available & (reliability: 1930.0) & (original description: Putative At4g18030, Description = Probable methyltransferase PMT14, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf11205_23503-26266' '(at4g28088 : 88.2) Low temperature and salt responsive protein family; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0057 (InterPro:IPR000612); BEST Arabidopsis thaliana protein match is: Low temperature and salt responsive protein family (TAIR:AT2G24040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative At4g30660, Description = UPF0057 membrane protein At4g30660, PFAM = PF01679)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf12041_1-7414' '(at2g39750 : 1004.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: Putative methyltransferase family protein (TAIR:AT5G06050.1); Has 1633 Blast hits to 1528 proteins in 174 species: Archae - 2; Bacteria - 140; Metazoa - 223; Fungi - 78; Plants - 1007; Viruses - 29; Other Eukaryotes - 154 (source: NCBI BLink). & (gnl|cdd|66793 : 797.0) no description available & (reliability: 2008.0) & (original description: Putative At2g39750, Description = Probable methyltransferase PMT11, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf12383_143148-162975' '(at1g60220 : 330.0) Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sGFP:OTS1 protein accumulates in the nucleus. Double mutant analysis with ULP1C/OTS2 indicates that these genes are involved in salt stress responses and flowering time regulation. Over-expression of 35S:OTS1 increases salt tolerance and reduces the level of SUMO-conjugated proteins. OTS1 transcript levels do not appear to change in response to salt, but, salt stress reduces the level of OTS1 protein in a proteasome-dependent manner.; UB-like protease 1D (ULP1D); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G10570.2); Has 2556 Blast hits to 2339 proteins in 246 species: Archae - 0; Bacteria - 12; Metazoa - 1276; Fungi - 441; Plants - 318; Viruses - 13; Other Eukaryotes - 496 (source: NCBI BLink). & (gnl|cdd|35998 : 158.0) no description available & (gnl|cdd|34761 : 119.0) no description available & (reliability: 660.0) & (original description: Putative OTS1, Description = Putative ulp1 protease, PFAM = PF02902)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf12954_541488-545409' '(at1g47980 : 302.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62730.1); Has 169 Blast hits to 169 proteins in 41 species: Archae - 0; Bacteria - 68; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 600.0) & (original description: Putative Sb09g003940, Description = Putative uncharacterized protein Sb09g003940, PFAM = PF13668)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf13103_4355-9126' '(gnl|cdd|66831 : 227.0) no description available & (at5g25610 : 184.0) responsive to dehydration 22 (RD22) mediated by ABA; RESPONSIVE TO DESSICATION 22 (RD22); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: unknown seed protein like 1 (TAIR:AT1G49320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p21745|ea30_vicfa : 103.0) Embryonic abundant protein VF30.1 precursor - Vicia faba (Broad bean) & (reliability: 368.0) & (original description: Putative rd22c, Description = BURP domain-containing protein, PFAM = PF03181)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf13816_150134-153064' '(gnl|cdd|87067 : 317.0) no description available & (at3g25780 : 246.0) Encodes allene oxide cyclase, one of the enzymes involved in jasmonic acid biosynthesis. One of four genes in Arabidopsis that encode this enzyme. mRNA expression is upregulated in senescing leaves. Note: Nomenclature for Arabidopsis allene oxide cyclase 3 (AOC3, AT3G25780) gene is based on Stenzel et al. 2003 Plant Molecular Biology 51:895-911. AOC3 (AT3G25780) is also referred to as AOC2 in He et al. 2002 Plant Physiology, 128:876-884.; allene oxide cyclase 3 (AOC3); FUNCTIONS IN: allene-oxide cyclase activity; INVOLVED IN: response to salt stress, response to fungus, jasmonic acid biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Allene oxide cyclase (InterPro:IPR009410); BEST Arabidopsis thaliana protein match is: allene oxide cyclase 2 (TAIR:AT3G25770.1); Has 202 Blast hits to 202 proteins in 32 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 198; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative aoc, Description = Allene oxide cyclase, PFAM = PF06351)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf14755_126395-132413' '(at5g14430 : 906.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: Golgi apparatus, plasma membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G23300.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66793 : 752.0) no description available & (reliability: 1812.0) & (original description: Putative At5g14430, Description = Probable methyltransferase PMT9, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf15067_498458-510815' '(at4g00740 : 966.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G10440.1); Has 1057 Blast hits to 1046 proteins in 101 species: Archae - 2; Bacteria - 148; Metazoa - 0; Fungi - 0; Plants - 904; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|66793 : 695.0) no description available & (reliability: 1932.0) & (original description: Putative At4g00740, Description = Probable methyltransferase PMT13, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf16937_83330-89520' '(at2g18250 : 227.0) At2g18250 encodes pantetheine-phosphate adenylyltransferase catalyzing the formation of dephospho-CoA from pantetheine 4'-phosphate. The enzyme is involved in coenzyme A biosynthesis.; 4-phosphopantetheine adenylyltransferase (COAD); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); Has 633 Blast hits to 630 proteins in 285 species: Archae - 179; Bacteria - 4; Metazoa - 125; Fungi - 130; Plants - 59; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (gnl|cdd|38561 : 193.0) no description available & (gnl|cdd|28826 : 187.0) no description available & (reliability: 454.0) & (original description: Putative COAD, Description = Phosphopantetheine adenylyltransferase, PFAM = PF01467)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf19623_48370-58555' '(at1g26850 : 980.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: Golgi apparatus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G18030.1); Has 1039 Blast hits to 1012 proteins in 98 species: Archae - 0; Bacteria - 124; Metazoa - 0; Fungi - 0; Plants - 910; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66793 : 791.0) no description available & (reliability: 1960.0) & (original description: Putative At1g26850, Description = Probable methyltransferase PMT2, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf20209_17682-29022' '(at1g32090 : 1025.0) early-responsive to dehydration stress protein (ERD4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1524 Blast hits to 1296 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 776; Plants - 431; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (gnl|cdd|36349 : 733.0) no description available & (gnl|cdd|66403 : 408.0) no description available & (reliability: 2050.0) & (original description: Putative At1g32090, Description = CSC1-like protein At1g32090, PFAM = PF02714;PF13967;PF14703)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf20914_88079-95627' '(at4g02900 : 1029.0) ERD (early-responsive to dehydration stress) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1474 Blast hits to 1292 proteins in 188 species: Archae - 0; Bacteria - 2; Metazoa - 189; Fungi - 715; Plants - 435; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|36349 : 733.0) no description available & (gnl|cdd|66403 : 399.0) no description available & (reliability: 2058.0) & (original description: Putative At4g02900, Description = CSC1-like protein At4g02900, PFAM = PF02714;PF14703;PF13967)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf27001_35060-41444' '(at4g00750 : 895.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G45750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66793 : 796.0) no description available & (reliability: 1790.0) & (original description: Putative At4g00750, Description = Probable methyltransferase PMT15, PFAM = PF03141)' T '20.2.3' 'stress.abiotic.drought/salt' 'niben101scf38415_2714-10163' '(at4g22120 : 572.0) ERD (early-responsive to dehydration stress) family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT4G04340.1). & (gnl|cdd|36349 : 440.0) no description available & (gnl|cdd|35153 : 143.0) no description available & (reliability: 1144.0) & (original description: Putative BnaC04g19500D, Description = BnaC04g19500D protein, PFAM = PF14703;PF13967)' T '20.2.4' 'stress.abiotic.touch/wounding' 'nbv0.3scaffold12068_5174-10397' '(at4g15820 : 105.0) BEST Arabidopsis thaliana protein match is: embryo defective 1703 (TAIR:AT3G61780.1); Has 524 Blast hits to 443 proteins in 102 species: Archae - 0; Bacteria - 13; Metazoa - 196; Fungi - 37; Plants - 43; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative dl3950w, Description = Putative uncharacterized protein AT4g15820, PFAM = )' T '20.2.4' 'stress.abiotic.touch/wounding' 'nbv0.3scaffold41110_1634-6427' '(at5g42050 : 308.0) DCD (Development and Cell Death) domain protein; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G27090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p37707|b2_dauca : 295.0) B2 protein - Daucus carota (Carrot) & (reliability: 616.0) & (original description: Putative , Description = DCD (Development and cell death) domain protein, PFAM = PF10539)' T '20.2.4' 'stress.abiotic.touch/wounding' 'nbv0.5scaffold1188_187364-209598' '(at1g21610 : 323.0) wound-responsive family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to wounding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G77310.1). & (reliability: 646.0) & (original description: Putative , Description = , PFAM = PF08729)' T '20.2.4' 'stress.abiotic.touch/wounding' 'nbv0.5scaffold1714_265105-299850' '(at1g21610 : 349.0) wound-responsive family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to wounding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G77310.1). & (reliability: 698.0) & (original description: Putative , Description = , PFAM = PF08729)' T '20.2.4' 'stress.abiotic.touch/wounding' 'nbv0.5scaffold3606_232747-237970' '(at4g15820 : 106.0) BEST Arabidopsis thaliana protein match is: embryo defective 1703 (TAIR:AT3G61780.1); Has 524 Blast hits to 443 proteins in 102 species: Archae - 0; Bacteria - 13; Metazoa - 196; Fungi - 37; Plants - 43; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative dl3950w, Description = Putative uncharacterized protein AT4g15820, PFAM = )' T '20.2.4' 'stress.abiotic.touch/wounding' 'niben044scf00006167ctg014_2531-7642' '(at4g02260 : 95.9) RELA/SPOT homolog 1 (RSH1); FUNCTIONS IN: catalytic activity; INVOLVED IN: response to wounding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), TGS-like (InterPro:IPR012676), TGS (InterPro:IPR004095), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 3 (TAIR:AT1G54130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative RSH1, Description = AtRSH1, PFAM = )' T '20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf00125_193371-213151' '(at4g02260 : 1126.0) RELA/SPOT homolog 1 (RSH1); FUNCTIONS IN: catalytic activity; INVOLVED IN: response to wounding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), TGS-like (InterPro:IPR012676), TGS (InterPro:IPR004095), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 3 (TAIR:AT1G54130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30665 : 406.0) no description available & (gnl|cdd|36372 : 166.0) no description available & (reliability: 2252.0) & (original description: Putative RSH1, Description = Putative GTP diphosphokinase RSH1, chloroplastic, PFAM = PF02824;PF13328;PF04607)' T '20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf00125_196299-199243' '(at4g02260 : 157.0) RELA/SPOT homolog 1 (RSH1); FUNCTIONS IN: catalytic activity; INVOLVED IN: response to wounding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), TGS-like (InterPro:IPR012676), TGS (InterPro:IPR004095), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 3 (TAIR:AT1G54130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30665 : 101.0) no description available & (reliability: 314.0) & (original description: Putative relA, Description = GTP pyrophosphokinase, PFAM = PF02824)' T '20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf00132_186591-191589' '(p37707|b2_dauca : 306.0) B2 protein - Daucus carota (Carrot) & (at5g42050 : 270.0) DCD (Development and Cell Death) domain protein; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G27090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 540.0) & (original description: Putative , Description = DCD (Development and cell death) domain protein, PFAM = PF10539)' T '20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf00773_840942-843524' '(p20144|wun1_soltu : 165.0) Wound-induced protein 1 - Solanum tuberosum (Potato) & (gnl|cdd|70566 : 147.0) no description available & (at3g10985 : 115.0) A senescence-associated gene whose expression is induced in response to treatment with Nep1, a fungal protein that causes necrosis.; senescence associated gene 20 (SAG20); CONTAINS InterPro DOMAIN/s: Wound-induced protein, Wun1, subgroup (InterPro:IPR016533), Wound-induced protein, Wun1 (InterPro:IPR009798); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT5G01740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative F9F8.20, Description = Predicted protein, PFAM = PF07107)' T '20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf00831_135340-138683' '(gnl|cdd|70680 : 272.0) no description available & (at5g43860 : 231.0) Encodes a chlorophyllase, the first enzyme in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to chlorophyllide and phytol. AtCLH2 has a typical signal sequence for the chloroplast. Gene expression does not respond to methyljasmonate, a known promoter of senescence and chlorophyll degradation.; chlorophyllase 2 (CLH2); CONTAINS InterPro DOMAIN/s: Chlorophyllase-like (InterPro:IPR010821), Chlorophyllase, chloroplast (InterPro:IPR017395); BEST Arabidopsis thaliana protein match is: chlorophyllase 1 (TAIR:AT1G19670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9mv14|clh1_citsi : 189.0) Chlorophyllase-1, chloroplast precursor (EC 3.1.1.14) (Chlorophyll-chlorophyllido hydrolase 1) (Chlase 1) - Citrus sinensis (Sweet orange) & (reliability: 438.0) & (original description: Putative CLH1, Description = Chlorophyllase, PFAM = PF12740)' T '20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf00978_1132174-1135313' '(at5g58750 : 428.0) NAD(P)-binding Rossmann-fold superfamily protein; BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G24220.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 856.0) & (original description: Putative TCM_041627, Description = NAD(P)-binding Rossmann-fold superfamily protein, PFAM = PF01370)' T '20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf01024_438466-440091' '(at4g10270 : 80.1) Wound-responsive family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function wound-induced (InterPro:IPR022251); BEST Arabidopsis thaliana protein match is: Wound-responsive family protein (TAIR:AT4G10265.1); Has 183 Blast hits to 182 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 183; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative Sb06g029890, Description = Putative uncharacterized protein Sb06g029890, PFAM = PF12609)' T '20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf01024_439459-510674' '(at4g10270 : 81.3) Wound-responsive family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function wound-induced (InterPro:IPR022251); BEST Arabidopsis thaliana protein match is: Wound-responsive family protein (TAIR:AT4G10265.1); Has 183 Blast hits to 182 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 183; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative BnaC06g21340D, Description = BnaC06g21340D protein, PFAM = PF12609)' T '20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf01623_219513-245212' '(at4g02260 : 1207.0) RELA/SPOT homolog 1 (RSH1); FUNCTIONS IN: catalytic activity; INVOLVED IN: response to wounding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), TGS-like (InterPro:IPR012676), TGS (InterPro:IPR004095), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 3 (TAIR:AT1G54130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30665 : 470.0) no description available & (gnl|cdd|36372 : 221.0) no description available & (reliability: 2414.0) & (original description: Putative RSH1, Description = Putative GTP diphosphokinase RSH1, chloroplastic, PFAM = PF04607;PF02824;PF13328)' T '20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf02597_538471-570124' '(at1g21610 : 346.0) wound-responsive family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to wounding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G77310.1). & (reliability: 692.0) & (original description: Putative , Description = , PFAM = PF08729)' T '20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf02665_569377-572513' '(at5g58750 : 436.0) NAD(P)-binding Rossmann-fold superfamily protein; BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G24220.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 872.0) & (original description: Putative TCM_041627, Description = NAD(P)-binding Rossmann-fold superfamily protein, PFAM = PF01370)' T '20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf03850_294392-299185' '(p37707|b2_dauca : 293.0) B2 protein - Daucus carota (Carrot) & (at5g42050 : 264.0) DCD (Development and Cell Death) domain protein; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G27090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 528.0) & (original description: Putative , Description = DCD (Development and cell death) domain protein, PFAM = PF10539)' T '20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf03857_219287-221975' '(at4g15820 : 94.0) BEST Arabidopsis thaliana protein match is: embryo defective 1703 (TAIR:AT3G61780.1); Has 524 Blast hits to 443 proteins in 102 species: Archae - 0; Bacteria - 13; Metazoa - 196; Fungi - 37; Plants - 43; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative PGSC0003DMG400006281, Description = Putative myb-like protein X-like, PFAM = PF11360)' T '20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf03926_11813-17362' '(at1g19660 : 396.0) Wound-responsive family protein; FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: response to wounding, nucleotide-excision repair; EXPRESSED IN: ovule; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF151 (InterPro:IPR003729), UvrB/UvrC protein (InterPro:IPR001943); BEST Arabidopsis thaliana protein match is: bifunctional nuclease in basal defense response 1 (TAIR:AT1G75380.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 792.0) & (original description: Putative BBD2, Description = Bifunctional nuclease 2, PFAM = PF02577)' T '20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf04292_756997-759580' '(p20144|wun1_soltu : 166.0) Wound-induced protein 1 - Solanum tuberosum (Potato) & (gnl|cdd|70566 : 152.0) no description available & (at3g10985 : 127.0) A senescence-associated gene whose expression is induced in response to treatment with Nep1, a fungal protein that causes necrosis.; senescence associated gene 20 (SAG20); CONTAINS InterPro DOMAIN/s: Wound-induced protein, Wun1, subgroup (InterPro:IPR016533), Wound-induced protein, Wun1 (InterPro:IPR009798); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT5G01740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative F9F8.20, Description = Predicted protein, PFAM = PF07107)' T '20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf04629_230991-236526' '(at1g75380 : 384.0) Encodes a nucleases AtBBD1 involved in ABA-mediated callose deposition.; bifunctional nuclease in basal defense response 1 (BBD1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF151 (InterPro:IPR003729), UvrB/UvrC protein (InterPro:IPR001943); BEST Arabidopsis thaliana protein match is: Wound-responsive family protein (TAIR:AT1G19660.2); Has 843 Blast hits to 843 proteins in 291 species: Archae - 44; Bacteria - 501; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 193 (source: NCBI BLink). & (reliability: 768.0) & (original description: Putative BBD, Description = Bifunctional nuclease 1, PFAM = PF02577)' T '20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf06654_45302-47550' '(at4g10270 : 80.9) Wound-responsive family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function wound-induced (InterPro:IPR022251); BEST Arabidopsis thaliana protein match is: Wound-responsive family protein (TAIR:AT4G10265.1); Has 183 Blast hits to 182 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 183; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative BnaC06g21340D, Description = BnaC06g21340D protein, PFAM = PF12609)' T '20.2.4' 'stress.abiotic.touch/wounding' 'niben101scf26911_30375-36869' '(at4g15820 : 87.0) BEST Arabidopsis thaliana protein match is: embryo defective 1703 (TAIR:AT3G61780.1); Has 524 Blast hits to 443 proteins in 102 species: Archae - 0; Bacteria - 13; Metazoa - 196; Fungi - 37; Plants - 43; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative dl3950w, Description = Putative uncharacterized protein AT4g15820, PFAM = PF11360)' T '20.2.5' 'stress.abiotic.light' 'nbv0.3scaffold19365_26894-50368' '(at4g05420 : 1987.0) Structurally similar to damaged DNA binding proteins.DDB1a is part of a 350 KDa nuclear localized DET1 protein complex. This complex may physically interact with histone tails and while bound to chromatin- repress transcription of genes involved in photomorphogenesis.; damaged DNA binding protein 1A (DDB1A); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: negative regulation of transcription, negative regulation of photomorphogenesis; LOCATED IN: nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: damaged DNA binding protein 1B (TAIR:AT4G21100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37108 : 1483.0) no description available & (gnl|cdd|66828 : 337.0) no description available & (q7xwp1|cpsf1_orysa : 81.3) Probable cleavage and polyadenylation specificity factor 160 kDa subunit (CPSF 160 kDa subunit) - Oryza sativa (Rice) & (reliability: 3974.0) & (original description: Putative DDB1, Description = DNA damage-binding protein 1, PFAM = PF10433;PF03178)' T '20.2.5' 'stress.abiotic.light' 'nbv0.5scaffold728_252156-258430' '(at1g75100 : 235.0) Contains a J-domain at the C-terminus which is similar to the J-domain of auxilin, a clathrin-uncoating factor in cow, yeast and worm. Arabidopsis contains 6 other proteins similar to auxilin. Expressed in leaves and stems, but not in roots. Localized in the cytoplasm. Required for the chloroplast accumulation response, but not for the avoidance response. No molecular function known.; J-domain protein required for chloroplast accumulation response 1 (JAC1); FUNCTIONS IN: heat shock protein binding; INVOLVED IN: chloroplast accumulation movement; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G12770.2); Has 3388 Blast hits to 2243 proteins in 304 species: Archae - 0; Bacteria - 260; Metazoa - 1198; Fungi - 423; Plants - 300; Viruses - 11; Other Eukaryotes - 1196 (source: NCBI BLink). & (gnl|cdd|35652 : 135.0) no description available & (reliability: 470.0) & (original description: Putative AUL1, Description = Auxilin-related protein 2, PFAM = )' T '20.2.5' 'stress.abiotic.light' 'nbv0.5scaffold802_8622-30888' '(at4g05420 : 1999.0) Structurally similar to damaged DNA binding proteins.DDB1a is part of a 350 KDa nuclear localized DET1 protein complex. This complex may physically interact with histone tails and while bound to chromatin- repress transcription of genes involved in photomorphogenesis.; damaged DNA binding protein 1A (DDB1A); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: negative regulation of transcription, negative regulation of photomorphogenesis; LOCATED IN: nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: damaged DNA binding protein 1B (TAIR:AT4G21100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37108 : 1489.0) no description available & (gnl|cdd|66828 : 345.0) no description available & (q7xwp1|cpsf1_orysa : 88.6) Probable cleavage and polyadenylation specificity factor 160 kDa subunit (CPSF 160 kDa subunit) - Oryza sativa (Rice) & (reliability: 3998.0) & (original description: Putative DDB1, Description = DNA damage-binding protein 1, PFAM = PF10433;PF03178)' T '20.2.5' 'stress.abiotic.light' 'niben101scf01281_1052864-1076536' '(at4g05420 : 1934.0) Structurally similar to damaged DNA binding proteins.DDB1a is part of a 350 KDa nuclear localized DET1 protein complex. This complex may physically interact with histone tails and while bound to chromatin- repress transcription of genes involved in photomorphogenesis.; damaged DNA binding protein 1A (DDB1A); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: negative regulation of transcription, negative regulation of photomorphogenesis; LOCATED IN: nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: damaged DNA binding protein 1B (TAIR:AT4G21100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37108 : 1441.0) no description available & (gnl|cdd|66828 : 343.0) no description available & (q7xwp1|cpsf1_orysa : 86.7) Probable cleavage and polyadenylation specificity factor 160 kDa subunit (CPSF 160 kDa subunit) - Oryza sativa (Rice) & (reliability: 3868.0) & (original description: Putative DDB1, Description = DNA damage-binding protein 1, PFAM = PF10433;PF03178)' T '20.2.5' 'stress.abiotic.light' 'niben101scf01822_978902-988108' '(at1g32230 : 372.0) Encodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family. Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants. Without stress treatment, RCD1 is localized in the nucleus. Under high salt or oxidative stress, RCD1 is found not only in the nucleus but also in the cytoplasm.; WWE protein-protein interaction domain protein family; CONTAINS InterPro DOMAIN/s: WWE domain (InterPro:IPR004170), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: similar to RCD one 1 (TAIR:AT2G35510.1); Has 178 Blast hits to 176 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 744.0) & (original description: Putative BnaCnng35940D, Description = Poly [ADP-ribose] polymerase, PFAM = PF12174)' T '20.2.5' 'stress.abiotic.light' 'niben101scf01879_108464-120947' '(at1g32230 : 433.0) Encodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family. Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants. Without stress treatment, RCD1 is localized in the nucleus. Under high salt or oxidative stress, RCD1 is found not only in the nucleus but also in the cytoplasm.; WWE protein-protein interaction domain protein family; CONTAINS InterPro DOMAIN/s: WWE domain (InterPro:IPR004170), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: similar to RCD one 1 (TAIR:AT2G35510.1); Has 178 Blast hits to 176 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 866.0) & (original description: Putative RCD1, Description = Inactive poly [ADP-ribose] polymerase RCD1, PFAM = PF00644;PF12174)' T '20.2.5' 'stress.abiotic.light' 'niben101scf02375_78329-82287' '(at1g32230 : 182.0) Encodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family. Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants. Without stress treatment, RCD1 is localized in the nucleus. Under high salt or oxidative stress, RCD1 is found not only in the nucleus but also in the cytoplasm.; WWE protein-protein interaction domain protein family; CONTAINS InterPro DOMAIN/s: WWE domain (InterPro:IPR004170), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: similar to RCD one 1 (TAIR:AT2G35510.1); Has 178 Blast hits to 176 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative PGSC0003DMG400004959, Description = Poly [ADP-ribose] polymerase, PFAM = PF12174;PF00644)' T '20.2.5' 'stress.abiotic.light' 'niben101scf03710_756696-766215' '(at1g21640 : 1230.0) Encodes a protein with NAD kinase activity. The protein was also shown to bind calmodulin.; NAD kinase 2 (NADK2); FUNCTIONS IN: NAD+ kinase activity, calmodulin binding; INVOLVED IN: pyridine nucleotide biosynthetic process, metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP-NAD kinase, PpnK-type, alpha/beta (InterPro:IPR017438), ATP-NAD kinase, PpnK-type (InterPro:IPR016064), ATP-NAD/AcoX kinase (InterPro:IPR002504), ATP-NAD kinase, PpnK-type, all-beta (InterPro:IPR017437); BEST Arabidopsis thaliana protein match is: NAD kinase 1 (TAIR:AT3G21070.2). & (q53ni2|nadk2_orysa : 1124.0) Probable NAD kinase 2, chloroplast precursor (EC 2.7.1.23) - Oryza sativa (Rice) & (gnl|cdd|37389 : 390.0) no description available & (gnl|cdd|30410 : 212.0) no description available & (reliability: 2460.0) & (original description: Putative NADK2, Description = NAD kinase 2, chloroplastic, PFAM = PF01513)' T '20.2.5' 'stress.abiotic.light' 'niben101scf07512_92575-151718' '(at5g63860 : 657.0) UV-B-specific signaling component that orchestrates expression of a range of genes with vital UV-protective functions. Located in the nucleus and the cytosol. Associates with chromatin via histones. UV-B light promotes URV8 protein accumulation in the nucleus.; UVB-RESISTANCE 8 (UVR8); FUNCTIONS IN: chromatin binding, guanyl-nucleotide exchange factor activity; INVOLVED IN: response to UV, response to UV-B; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G12350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|34783 : 174.0) no description available & (gnl|cdd|36640 : 141.0) no description available & (reliability: 1314.0) & (original description: Putative UVR8, Description = Ultraviolet-B receptor UVR8, PFAM = PF00415;PF00415;PF00415;PF00415;PF00415;PF00415;PF00415)' T '20.2.5' 'stress.abiotic.light' 'niben101scf09628_209011-215788' '(at1g32230 : 372.0) Encodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family. Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants. Without stress treatment, RCD1 is localized in the nucleus. Under high salt or oxidative stress, RCD1 is found not only in the nucleus but also in the cytoplasm.; WWE protein-protein interaction domain protein family; CONTAINS InterPro DOMAIN/s: WWE domain (InterPro:IPR004170), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: similar to RCD one 1 (TAIR:AT2G35510.1); Has 178 Blast hits to 176 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 744.0) & (original description: Putative BnaCnng35940D, Description = Poly [ADP-ribose] polymerase, PFAM = PF12174)' T '20.2.5' 'stress.abiotic.light' 'niben101scf14041_88519-99273' '(at1g21640 : 1220.0) Encodes a protein with NAD kinase activity. The protein was also shown to bind calmodulin.; NAD kinase 2 (NADK2); FUNCTIONS IN: NAD+ kinase activity, calmodulin binding; INVOLVED IN: pyridine nucleotide biosynthetic process, metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP-NAD kinase, PpnK-type, alpha/beta (InterPro:IPR017438), ATP-NAD kinase, PpnK-type (InterPro:IPR016064), ATP-NAD/AcoX kinase (InterPro:IPR002504), ATP-NAD kinase, PpnK-type, all-beta (InterPro:IPR017437); BEST Arabidopsis thaliana protein match is: NAD kinase 1 (TAIR:AT3G21070.2). & (q53ni2|nadk2_orysa : 1133.0) Probable NAD kinase 2, chloroplast precursor (EC 2.7.1.23) - Oryza sativa (Rice) & (gnl|cdd|37389 : 390.0) no description available & (gnl|cdd|30410 : 214.0) no description available & (reliability: 2440.0) & (original description: Putative NADK2, Description = NAD kinase 2, chloroplastic, PFAM = PF01513)' T '20.2.5' 'stress.abiotic.light' 'niben101scf14041_89128-99270' '(at1g21640 : 639.0) Encodes a protein with NAD kinase activity. The protein was also shown to bind calmodulin.; NAD kinase 2 (NADK2); FUNCTIONS IN: NAD+ kinase activity, calmodulin binding; INVOLVED IN: pyridine nucleotide biosynthetic process, metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP-NAD kinase, PpnK-type, alpha/beta (InterPro:IPR017438), ATP-NAD kinase, PpnK-type (InterPro:IPR016064), ATP-NAD/AcoX kinase (InterPro:IPR002504), ATP-NAD kinase, PpnK-type, all-beta (InterPro:IPR017437); BEST Arabidopsis thaliana protein match is: NAD kinase 1 (TAIR:AT3G21070.2). & (q53ni2|nadk2_orysa : 570.0) Probable NAD kinase 2, chloroplast precursor (EC 2.7.1.23) - Oryza sativa (Rice) & (gnl|cdd|37389 : 167.0) no description available & (gnl|cdd|30410 : 85.4) no description available & (reliability: 1278.0) & (original description: Putative NADK, Description = NAD kinase, PFAM = PF01513)' T '20.2.5' 'stress.abiotic.light' 'niben101scf18348_71742-78169' '(at1g75100 : 241.0) Contains a J-domain at the C-terminus which is similar to the J-domain of auxilin, a clathrin-uncoating factor in cow, yeast and worm. Arabidopsis contains 6 other proteins similar to auxilin. Expressed in leaves and stems, but not in roots. Localized in the cytoplasm. Required for the chloroplast accumulation response, but not for the avoidance response. No molecular function known.; J-domain protein required for chloroplast accumulation response 1 (JAC1); FUNCTIONS IN: heat shock protein binding; INVOLVED IN: chloroplast accumulation movement; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G12770.2); Has 3388 Blast hits to 2243 proteins in 304 species: Archae - 0; Bacteria - 260; Metazoa - 1198; Fungi - 423; Plants - 300; Viruses - 11; Other Eukaryotes - 1196 (source: NCBI BLink). & (gnl|cdd|35652 : 134.0) no description available & (reliability: 482.0) & (original description: Putative AUL1, Description = Auxilin-related protein 2, PFAM = )' T '20.2.6' 'stress.abiotic.heavy metals' '' '' '20.2.99' 'stress.abiotic.unspecified' 'nbv0.3scaffold115_119856-122648' '(gnl|cdd|85297 : 150.0) no description available & (o49813|olee1_betve : 128.0) Olee1-like protein precursor - Betula verrucosa (White birch) (Betula pendula) & (at1g29140 : 114.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT4G18596.1); Has 312 Blast hits to 312 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 312; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative LAT52, Description = Anther-specific protein LAT52, PFAM = PF01190)' T '20.2.99' 'stress.abiotic.unspecified' 'nbv0.3scaffold539_4821-9801' '(at2g47710 : 181.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49050.1); Has 2830 Blast hits to 2747 proteins in 619 species: Archae - 112; Bacteria - 1833; Metazoa - 129; Fungi - 32; Plants - 667; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|30165 : 86.3) no description available & (reliability: 362.0) & (original description: Putative USP, Description = Universal stress protein, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'nbv0.3scaffold7003_8237-11297' '(gnl|cdd|84754 : 127.0) no description available & (at1g70890 : 85.1) MLP-like protein 43 (MLP43); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.5); Has 440 Blast hits to 408 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 440; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative orf, Description = Putative PR-10 type pathogenesis-related protein, PFAM = PF00407)' T '20.2.99' 'stress.abiotic.unspecified' 'nbv0.3scaffold22337_26867-31343' '(q9spv5|nec1_nicpl : 316.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g62020 : 279.0) germin-like protein (GLP10); germin-like protein 10 (GLP10); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein subfamily 2 member 2 precursor (TAIR:AT1G02335.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84597 : 111.0) no description available & (reliability: 558.0) & (original description: Putative NECI, Description = Nectarin-1, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'nbv0.3scaffold23944_1945-5598' '(q9spv5|nec1_nicpl : 297.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g62020 : 268.0) germin-like protein (GLP10); germin-like protein 10 (GLP10); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein subfamily 2 member 2 precursor (TAIR:AT1G02335.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84597 : 107.0) no description available & (reliability: 536.0) & (original description: Putative Os05g0277500, Description = Germin-like protein 5-1, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'nbv0.3scaffold51132_8698-11324' '(at2g40330 : 223.0) Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.; PYR1-like 6 (PYL6); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT5G05440.1); Has 471 Blast hits to 471 proteins in 38 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 2; Plants - 458; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative PYL6, Description = Abscisic acid receptor PYL6, PFAM = PF10604)' T '20.2.99' 'stress.abiotic.unspecified' 'nbv0.3scaffold59779_6242-11798' '(at3g05950 : 248.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: sperm cell, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04200.1); Has 1545 Blast hits to 1539 proteins in 111 species: Archae - 0; Bacteria - 53; Metazoa - 0; Fungi - 32; Plants - 1447; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 191.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 116.0) no description available & (reliability: 496.0) & (original description: Putative Os02g0491800, Description = Putative germin-like protein 2-3, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'nbv0.3scaffold65328_2200-5448' '(at2g34700 : 112.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: arabinogalactan protein 31 (TAIR:AT1G28290.1); Has 194 Blast hits to 194 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 194; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q03211|pexlp_tobac : 103.0) Pistil-specific extensin-like protein precursor (PELP) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|85297 : 102.0) no description available & (reliability: 224.0) & (original description: Putative PELP, Description = Pistil-specific extensin-like protein, PFAM = PF01190)' T '20.2.99' 'stress.abiotic.unspecified' 'nbv0.5scaffold14_1769629-1773015' '(at2g47540 : 117.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: root hair specific 13 (TAIR:AT4G02270.1); Has 149 Blast hits to 149 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative PGSC0003DMG400031794, Description = Pollen Ole e 1 allergen and extensin family protein, PFAM = PF01190)' T '20.2.99' 'stress.abiotic.unspecified' 'nbv0.5scaffold838_266243-269776' '(q9spv5|nec1_nicpl : 225.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 207.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 96.1) no description available & (reliability: 414.0) & (original description: Putative NECI, Description = Nectarin-1, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'nbv0.5scaffold1304_430347-433595' '(at2g34700 : 111.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: arabinogalactan protein 31 (TAIR:AT1G28290.1); Has 194 Blast hits to 194 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 194; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|85297 : 103.0) no description available & (q03211|pexlp_tobac : 102.0) Pistil-specific extensin-like protein precursor (PELP) - Nicotiana tabacum (Common tobacco) & (reliability: 222.0) & (original description: Putative PRP5, Description = 120 kDa pistil extensin-like protein, PFAM = PF01190)' T '20.2.99' 'stress.abiotic.unspecified' 'nbv0.5scaffold1449_426653-435713' '(at5g14680 : 297.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G01520.1); Has 2663 Blast hits to 2654 proteins in 727 species: Archae - 164; Bacteria - 1702; Metazoa - 92; Fungi - 33; Plants - 646; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 594.0) & (original description: Putative At3g01520, Description = Universal stress protein A-like protein, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'nbv0.5scaffold2712_279686-297086' '(at1g11360 : 198.0) Adenine nucleotide alpha hydrolases-like superfamily protein; INVOLVED IN: response to stress; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT4G27320.1). & (gnl|cdd|84883 : 82.2) no description available & (reliability: 396.0) & (original description: Putative USP, Description = Universal stress protein, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'nbv0.5scaffold6542_96318-99553' '(at1g69080 : 161.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT2G03720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative MRH6, Description = At2g03720, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'nbv0.5scaffold50834_1-697' '(at3g05950 : 176.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: sperm cell, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04200.1); Has 1545 Blast hits to 1539 proteins in 111 species: Archae - 0; Bacteria - 53; Metazoa - 0; Fungi - 32; Plants - 1447; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 141.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 95.8) no description available & (reliability: 352.0) & (original description: Putative NEC1c, Description = Nectarin 1c, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben044scf00003832ctg062_8335-27830' '(at1g11360 : 207.0) Adenine nucleotide alpha hydrolases-like superfamily protein; INVOLVED IN: response to stress; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT4G27320.1). & (gnl|cdd|84883 : 82.5) no description available & (reliability: 414.0) & (original description: Putative ap1, Description = Adenine nucleotide alpha hydrolases-like superfamily, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'niben044scf00004222ctg031_795-5530' '(gnl|cdd|84754 : 129.0) no description available & (at1g70830 : 102.0) MLP-like protein 28 (MLP28); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 34 (TAIR:AT1G70850.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative orf, Description = Orf protein, PFAM = PF00407)' T '20.2.99' 'stress.abiotic.unspecified' 'niben044scf00004408ctg007_107-15286' '(at3g51780 : 185.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. BD domain of ATBAG4 had highest similarity to human DB domain of BAG protein. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 4 (BAG4); CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 3 (TAIR:AT5G07220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39562 : 97.8) no description available & (gnl|cdd|29214 : 86.4) no description available & (reliability: 370.0) & (original description: Putative BAG4, Description = BAG family molecular chaperone regulator 4, PFAM = PF02179;PF00240)' T '20.2.99' 'stress.abiotic.unspecified' 'niben044scf00009241ctg001_4316-7035' '(at1g11360 : 267.0) Adenine nucleotide alpha hydrolases-like superfamily protein; INVOLVED IN: response to stress; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT4G27320.1). & (gnl|cdd|84883 : 81.8) no description available & (reliability: 534.0) & (original description: Putative USP, Description = Universal stress protein, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'niben044scf00011374ctg017_1-1982' '(q9spv5|nec1_nicpl : 207.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 189.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 99.0) no description available & (reliability: 378.0) & (original description: Putative Ger, Description = Germin-like protein, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben044scf00013685ctg003_1300-4525' '(at3g09590 : 109.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G02730.1); Has 3024 Blast hits to 2931 proteins in 377 species: Archae - 0; Bacteria - 64; Metazoa - 1633; Fungi - 327; Plants - 888; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (p09042|pr1c_tobac : 92.0) Pathogenesis-related protein 1C precursor (PR-1C) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47528 : 85.8) no description available & (gnl|cdd|38227 : 85.7) no description available & (reliability: 210.0) & (original description: Putative At3g09590, Description = BnaC03g35900D protein, PFAM = PF00188)' T '20.2.99' 'stress.abiotic.unspecified' 'niben044scf00016701ctg001_3143-7141' '(at1g44760 : 230.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT1G69080.1); Has 216 Blast hits to 216 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 214; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative BnaC06g00720D, Description = BnaC06g00720D protein, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'niben044scf00020490ctg005_6620-10465' '(at1g69080 : 157.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT2G03720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative MRH6, Description = At2g03720, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'niben044scf00029699ctg003_13129-15623' '(at3g05950 : 231.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: sperm cell, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04200.1); Has 1545 Blast hits to 1539 proteins in 111 species: Archae - 0; Bacteria - 53; Metazoa - 0; Fungi - 32; Plants - 1447; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 184.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 112.0) no description available & (reliability: 462.0) & (original description: Putative Os02g0491600, Description = Putative germin-like protein 2-1, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben044scf00047151ctg005_15239-19011' '(at2g47710 : 169.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49050.1); Has 2830 Blast hits to 2747 proteins in 619 species: Archae - 112; Bacteria - 1833; Metazoa - 129; Fungi - 32; Plants - 667; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|30165 : 89.8) no description available & (reliability: 338.0) & (original description: Putative USP, Description = Universal stress protein, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'niben044scf00058779ctg004_2155-4793' '(at2g38310 : 228.0) Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.; PYR1-like 4 (PYL4); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT5G05440.1); Has 467 Blast hits to 463 proteins in 53 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 2; Plants - 445; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative PYL6, Description = Abscisic acid receptor PYL6, PFAM = PF10604)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101ctg08688_1-882' '(gnl|cdd|84754 : 105.0) no description available & (at1g70840 : 89.7) MLP-like protein 31 (MLP31); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.3); Has 485 Blast hits to 453 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 485; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative NtSN1b, Description = Putative PR-10 type pathogenesis-related protein, PFAM = PF00407)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101ctg13946_169-2284' '(q9zra4|ab19a_prupe : 253.0) Auxin-binding protein ABP19a precursor - Prunus persica (Peach) & (at5g20630 : 243.0) Encodes a germin-like protein. Its transcripts are more abundant in RNA from leaves collected in the evening, suggesting some kind of circadian regulation.; germin 3 (GER3); INVOLVED IN: response to cold, peptidyl-cysteine S-nitrosylation; LOCATED IN: extracellular matrix, apoplast, cell wall, nucleus, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 1 (TAIR:AT1G72610.1); Has 1486 Blast hits to 1484 proteins in 101 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi - 23; Plants - 1414; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|84597 : 93.1) no description available & (reliability: 486.0) & (original description: Putative glp, Description = Auxin-binding protein ABP19a, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf00024_70251-72929' '(at1g18980 : 240.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower, pollen tube; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: germin-like protein 4 (TAIR:AT1G18970.1); Has 1578 Blast hits to 1564 proteins in 115 species: Archae - 0; Bacteria - 82; Metazoa - 0; Fungi - 29; Plants - 1449; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (p45851|oxo2_horvu : 216.0) Oxalate oxidase 2 precursor (EC 1.2.3.4) (Germin) - Hordeum vulgare (Barley) & (gnl|cdd|84597 : 96.9) no description available & (reliability: 480.0) & (original description: Putative At1g18980, Description = Germin-like protein subfamily T member 2, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf00088_180112-183904' '(at3g05950 : 213.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: sperm cell, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04200.1); Has 1545 Blast hits to 1539 proteins in 111 species: Archae - 0; Bacteria - 53; Metazoa - 0; Fungi - 32; Plants - 1447; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 174.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 90.0) no description available & (reliability: 426.0) & (original description: Putative GER2, Description = Germin-like protein 1, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf00116_522678-530607' '(at1g11360 : 264.0) Adenine nucleotide alpha hydrolases-like superfamily protein; INVOLVED IN: response to stress; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT4G27320.1). & (gnl|cdd|84883 : 81.8) no description available & (reliability: 528.0) & (original description: Putative USP, Description = Universal stress protein, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf00131_159300-161848' '(q41495|st14_soltu : 192.0) STS14 protein precursor - Solanum tuberosum (Potato) & (at5g66590 : 167.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related (InterPro:IPR001283), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G57625.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29108 : 110.0) no description available & (gnl|cdd|38227 : 81.1) no description available & (reliability: 334.0) & (original description: Putative BnaA09g07820D, Description = BnaA09g07820D protein, PFAM = PF00188)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf00133_653097-654846' '(at5g05500 : 197.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT2G34700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative PGSC0003DMG400030033, Description = At5g05500, PFAM = PF01190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf00228_1248945-1260437' '(gnl|cdd|84754 : 160.0) no description available & (at1g70840 : 124.0) MLP-like protein 31 (MLP31); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.3); Has 485 Blast hits to 453 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 485; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative MLP, Description = MLP-like protein 28, PFAM = PF00407)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf00309_489202-491703' '(at4g14723 : 97.4) BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative EPFL4, Description = EPIDERMAL PATTERNING FACTOR-like protein 4, PFAM = PF17181)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf00340_725570-728391' '(at3g05950 : 252.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: sperm cell, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04200.1); Has 1545 Blast hits to 1539 proteins in 111 species: Archae - 0; Bacteria - 53; Metazoa - 0; Fungi - 32; Plants - 1447; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 195.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 114.0) no description available & (reliability: 504.0) & (original description: Putative Os02g0491800, Description = Putative germin-like protein 2-3, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf00340_758294-761034' '(at3g05950 : 250.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: sperm cell, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04200.1); Has 1545 Blast hits to 1539 proteins in 111 species: Archae - 0; Bacteria - 53; Metazoa - 0; Fungi - 32; Plants - 1447; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 197.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 113.0) no description available & (reliability: 500.0) & (original description: Putative Os02g0491600, Description = Putative germin-like protein 2-1, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf00394_136527-139414' '(at2g26040 : 263.0) Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.; PYR1-like 2 (PYL2); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: PYR1-like 3 (TAIR:AT1G73000.1); Has 445 Blast hits to 441 proteins in 38 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 439; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative PYL2, Description = Abscisic acid receptor PYL2, PFAM = PF10604)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf00398_78951-127441' '(gnl|cdd|85297 : 152.0) no description available & (o49813|olee1_betve : 127.0) Olee1-like protein precursor - Betula verrucosa (White birch) (Betula pendula) & (at1g29140 : 113.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT4G18596.1); Has 312 Blast hits to 312 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 312; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative LAT52, Description = Anther-specific protein LAT52, PFAM = PF01190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf00493_138923-141546' '(q9zra4|ab19a_prupe : 264.0) Auxin-binding protein ABP19a precursor - Prunus persica (Peach) & (at5g20630 : 246.0) Encodes a germin-like protein. Its transcripts are more abundant in RNA from leaves collected in the evening, suggesting some kind of circadian regulation.; germin 3 (GER3); INVOLVED IN: response to cold, peptidyl-cysteine S-nitrosylation; LOCATED IN: extracellular matrix, apoplast, cell wall, nucleus, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 1 (TAIR:AT1G72610.1); Has 1486 Blast hits to 1484 proteins in 101 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi - 23; Plants - 1414; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|84597 : 92.3) no description available & (reliability: 492.0) & (original description: Putative ABP19A, Description = Auxin-binding protein ABP19a, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf00602_134723-138124' '(at2g47710 : 188.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49050.1); Has 2830 Blast hits to 2747 proteins in 619 species: Archae - 112; Bacteria - 1833; Metazoa - 129; Fungi - 32; Plants - 667; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|30165 : 83.2) no description available & (reliability: 376.0) & (original description: Putative USP, Description = Universal stress protein, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf00682_612052-615598' '(at3g09925 : 196.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT5G05500.1); Has 222 Blast hits to 222 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative At3g09925, Description = Pollen Ole e 1 allergen and extensin family protein, PFAM = PF01190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf00705_234808-237570' '(at3g05950 : 281.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: sperm cell, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04200.1); Has 1545 Blast hits to 1539 proteins in 111 species: Archae - 0; Bacteria - 53; Metazoa - 0; Fungi - 32; Plants - 1447; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 228.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 108.0) no description available & (reliability: 562.0) & (original description: Putative Os02g0491600, Description = Putative germin-like protein 2-1, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf00705_243799-250796' '(at5g39110 : 184.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT5G39150.1); Has 1516 Blast hits to 1508 proteins in 93 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 39; Plants - 1454; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 143.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 84.2) no description available & (reliability: 368.0) & (original description: Putative GER1, Description = Germin-like protein subfamily 1 member 18, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf00705_293263-295763' '(at5g39130 : 216.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 2 (TAIR:AT5G39190.1); Has 1495 Blast hits to 1489 proteins in 85 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 27; Plants - 1451; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 167.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 99.6) no description available & (reliability: 432.0) & (original description: Putative GER2, Description = Germin-like protein 2a, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf00725_779672-785350' '(at1g48960 : 218.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT2G03720.1); Has 185 Blast hits to 185 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 185; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative At1g48960, Description = Adenine nucleotide alpha hydrolases-like protein, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf00735_630391-632692' '(gnl|cdd|70078 : 123.0) no description available & (at1g01170 : 114.0) Protein of unknown function (DUF1138); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1138 (InterPro:IPR009515); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1138) (TAIR:AT4G00860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative ATOZI1, Description = AT0ZI1 protein, PFAM = PF06592)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf00773_1113124-1115768' '(at2g38310 : 234.0) Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.; PYR1-like 4 (PYL4); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT5G05440.1); Has 467 Blast hits to 463 proteins in 53 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 2; Plants - 445; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative PYL6, Description = Abscisic acid receptor PYL6, PFAM = PF10604)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf00985_775860-779155' '(gnl|cdd|70078 : 119.0) no description available & (at1g01170 : 114.0) Protein of unknown function (DUF1138); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1138 (InterPro:IPR009515); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1138) (TAIR:AT4G00860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative AT0ZI1, Description = AT0ZI1 protein, PFAM = PF06592)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf01002_1375634-1378637' '(gnl|cdd|85297 : 145.0) no description available & (o49813|olee1_betve : 119.0) Olee1-like protein precursor - Betula verrucosa (White birch) (Betula pendula) & (at4g08685 : 100.0) Encodes a protein, expressed in leaves, with similarity to pollen allergens.; SAH7; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT1G78040.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative LAT52, Description = Anther-specific protein LAT52, PFAM = PF01190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf01143_308904-312311' '(at5g17390 : 168.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G03290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative MRH6, Description = At2g03720, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf01221_580101-582531' '(at4g13450 : 128.0) Adenine nucleotide alpha hydrolases-like superfamily protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative PGSC0003DMG400001554, Description = Adenine nucleotide alpha hydrolases-like superfamily protein, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf01237_177104-179628' '(at5g05500 : 199.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT2G34700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative PGSC0003DMG400030033, Description = At5g05500, PFAM = PF01190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf01420_85630-90134' '(at1g48960 : 194.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT2G03720.1); Has 185 Blast hits to 185 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 185; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative BnaC06g02390D, Description = BnaC06g02390D protein, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf01695_383981-388095' '(at2g47710 : 193.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49050.1); Has 2830 Blast hits to 2747 proteins in 619 species: Archae - 112; Bacteria - 1833; Metazoa - 129; Fungi - 32; Plants - 667; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|30165 : 92.1) no description available & (reliability: 386.0) & (original description: Putative BnaC03g26110D, Description = BnaC03g26110D protein, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf01775_130911-135651' '(q9spv5|nec1_nicpl : 276.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g62020 : 237.0) germin-like protein (GLP10); germin-like protein 10 (GLP10); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein subfamily 2 member 2 precursor (TAIR:AT1G02335.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84597 : 104.0) no description available & (reliability: 474.0) & (original description: Putative NECI, Description = Nectarin-1, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf02023_228445-231758' '(at4g08685 : 155.0) Encodes a protein, expressed in leaves, with similarity to pollen allergens.; SAH7; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT1G78040.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85297 : 120.0) no description available & (p33050|psc13_maize : 115.0) Pollen-specific protein C13 precursor - Zea mays (Maize) & (reliability: 310.0) & (original description: Putative SAH7, Description = Allergen-like protein BRSn20, PFAM = PF01190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf02029_126074-127941' '(q41495|st14_soltu : 257.0) STS14 protein precursor - Solanum tuberosum (Potato) & (at5g66590 : 191.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related (InterPro:IPR001283), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G57625.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29108 : 126.0) no description available & (gnl|cdd|38227 : 98.4) no description available & (reliability: 382.0) & (original description: Putative BnaA09g07820D, Description = BnaA09g07820D protein, PFAM = PF00188)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf02063_674579-766571' '(at5g39150 : 212.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT5G39180.1); Has 1509 Blast hits to 1501 proteins in 92 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 39; Plants - 1449; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 166.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 103.0) no description available & (reliability: 424.0) & (original description: Putative NEC1b, Description = Nectarin 1b, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf02085_1967295-1986652' '(at3g51780 : 193.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. BD domain of ATBAG4 had highest similarity to human DB domain of BAG protein. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 4 (BAG4); CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 3 (TAIR:AT5G07220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39562 : 102.0) no description available & (gnl|cdd|29214 : 83.0) no description available & (reliability: 386.0) & (original description: Putative BAG4, Description = BAG family molecular chaperone regulator 4, PFAM = PF00240;PF02179)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf02085_2133110-2135748' '(at2g38310 : 228.0) Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.; PYR1-like 4 (PYL4); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT5G05440.1); Has 467 Blast hits to 463 proteins in 53 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 2; Plants - 445; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative PYL8, Description = Abscisic acid receptor PYL8, PFAM = PF10604)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf02151_54792-58371' '(at1g69080 : 123.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT2G03720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative MRH6, Description = Adenine nucleotide alpha hydrolases-like protein, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf02486_300337-303358' '(q9spv5|nec1_nicpl : 218.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 201.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 89.2) no description available & (reliability: 402.0) & (original description: Putative GER1, Description = Germin-like protein, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf02486_300376-350936' '(q9spv5|nec1_nicpl : 213.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 199.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 90.0) no description available & (reliability: 398.0) & (original description: Putative GER1, Description = Germin-like protein, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf02486_345604-348861' '(q9spv5|nec1_nicpl : 231.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 217.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 98.8) no description available & (reliability: 434.0) & (original description: Putative NECI, Description = Nectarin-1, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf02486_345640-348927' '(q9spv5|nec1_nicpl : 228.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 216.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 97.7) no description available & (reliability: 432.0) & (original description: Putative GER1, Description = Germin-like protein, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf02610_186011-190384' '(at1g70830 : 249.0) MLP-like protein 28 (MLP28); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 34 (TAIR:AT1G70850.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84754 : 159.0) no description available & (reliability: 498.0) & (original description: Putative MLP, Description = MLP-like protein 28, PFAM = PF00407;PF00407)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf02618_422300-425424' '(gnl|cdd|84754 : 121.0) no description available & (at1g70880 : 97.4) Polyketide cyclase/dehydrase and lipid transport superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.5); Has 440 Blast hits to 408 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 440; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 194.8) & (original description: Putative NtSN1b, Description = Putative PR-10 type pathogenesis-related protein, PFAM = PF00407)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf02618_510410-513464' '(gnl|cdd|84754 : 120.0) no description available & (at1g70830 : 100.0) MLP-like protein 28 (MLP28); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 34 (TAIR:AT1G70850.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative orf, Description = Putative PR-10 type pathogenesis-related protein, PFAM = PF00407)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf02714_566608-569954' '(q9spv5|nec1_nicpl : 404.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g62020 : 259.0) germin-like protein (GLP10); germin-like protein 10 (GLP10); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein subfamily 2 member 2 precursor (TAIR:AT1G02335.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84597 : 111.0) no description available & (reliability: 518.0) & (original description: Putative NECI, Description = Nectarin-1, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf02749_419924-422547' '(q9zra4|ab19a_prupe : 272.0) Auxin-binding protein ABP19a precursor - Prunus persica (Peach) & (at5g20630 : 255.0) Encodes a germin-like protein. Its transcripts are more abundant in RNA from leaves collected in the evening, suggesting some kind of circadian regulation.; germin 3 (GER3); INVOLVED IN: response to cold, peptidyl-cysteine S-nitrosylation; LOCATED IN: extracellular matrix, apoplast, cell wall, nucleus, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 1 (TAIR:AT1G72610.1); Has 1486 Blast hits to 1484 proteins in 101 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi - 23; Plants - 1414; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|84597 : 93.1) no description available & (reliability: 510.0) & (original description: Putative ABP19A, Description = Auxin-binding protein ABP19a, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf02778_449667-453013' '(at1g11360 : 231.0) Adenine nucleotide alpha hydrolases-like superfamily protein; INVOLVED IN: response to stress; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT4G27320.1). & (gnl|cdd|30165 : 81.3) no description available & (reliability: 462.0) & (original description: Putative PHOS34, Description = Universal stress protein PHOS34, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf02917_20317-22967' '(at3g10080 : 268.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT1G18980.1); Has 1595 Blast hits to 1591 proteins in 125 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi - 57; Plants - 1448; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (q9spv5|nec1_nicpl : 150.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|84597 : 104.0) no description available & (reliability: 536.0) & (original description: Putative At3g10080, Description = Germin-like protein subfamily 3 member 2, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf03076_98910-102181' '(at2g44380 : 100.0) Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G43520.1); Has 1997 Blast hits to 742 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 1986; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative PGSC0003DMG400010439, Description = , PFAM = PF03107;PF03107;PF03107)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf03099_489470-492436' '(at1g24020 : 180.0) MLP-like protein 423 (MLP423); INVOLVED IN: response to biotic stimulus, defense response; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.3). & (gnl|cdd|84754 : 142.0) no description available & (reliability: 360.0) & (original description: Putative MLP423, Description = MLP-like protein 423, PFAM = PF00407)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf03106_130446-133105' '(at1g10460 : 214.0) germin-like protein (GLP7); germin-like protein 7 (GLP7); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G05950.1); Has 1505 Blast hits to 1501 proteins in 101 species: Archae - 0; Bacteria - 26; Metazoa - 0; Fungi - 42; Plants - 1425; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (q9spv5|nec1_nicpl : 155.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|84597 : 93.1) no description available & (reliability: 428.0) & (original description: Putative GLP7, Description = Germin-like protein subfamily 1 member 1, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf03145_239495-243600' '(at1g68300 : 159.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G11930.4); Has 7821 Blast hits to 7529 proteins in 1691 species: Archae - 688; Bacteria - 6019; Metazoa - 129; Fungi - 89; Plants - 708; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). & (gnl|cdd|30165 : 101.0) no description available & (reliability: 318.0) & (original description: Putative At1g68300, Description = Predicted protein, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf03160_284367-286264' '(at3g62020 : 127.0) germin-like protein (GLP10); germin-like protein 10 (GLP10); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein subfamily 2 member 2 precursor (TAIR:AT1G02335.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9s8p4|rhre_pea : 127.0) Rhicadhesin receptor precursor (Germin-like protein) - Pisum sativum (Garden pea) & (gnl|cdd|84597 : 86.5) no description available & (reliability: 254.0) & (original description: Putative Os09g0568600, Description = Putative germin-like protein 9-2, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf03160_286265-288171' '(at1g02335 : 119.0) germin-like protein subfamily 2 member 2 precursor (GL22); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; LOCATED IN: endomembrane system, apoplast; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 2264 Blast hits to 2183 proteins in 312 species: Archae - 0; Bacteria - 520; Metazoa - 1; Fungi - 98; Plants - 1608; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (q9spv5|nec1_nicpl : 116.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|84597 : 80.3) no description available & (reliability: 226.0) & (original description: Putative Os09g0568700, Description = Germin-like protein 9-3, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf03309_861205-864361' '(o49813|olee1_betve : 134.0) Olee1-like protein precursor - Betula verrucosa (White birch) (Betula pendula) & (at4g18596 : 130.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: extracellular space, endomembrane system; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041), Allergen Ole e 1, conserved site (InterPro:IPR006040); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT5G45880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85297 : 130.0) no description available & (reliability: 260.0) & (original description: Putative PGSC0003DMG400010242, Description = Olee1-like protein, PFAM = PF01190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf03510_55702-58785' '(at4g08685 : 131.0) Encodes a protein, expressed in leaves, with similarity to pollen allergens.; SAH7; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT1G78040.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85297 : 115.0) no description available & (p33050|psc13_maize : 103.0) Pollen-specific protein C13 precursor - Zea mays (Maize) & (reliability: 262.0) & (original description: Putative DFC, Description = Protein DOWNSTREAM OF FLC, PFAM = PF01190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf03756_229549-232955' '(at3g03290 : 154.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; EXPRESSED IN: embryo, leaf whorl; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT5G17390.1); Has 251 Blast hits to 245 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 74; Fungi - 1; Plants - 149; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative MRH6, Description = At2g03720, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf03842_163955-169539' '(at2g30370 : 115.0) Encodes a small, potentially secreted protein that acts as an inhibitor of stomatal production though likely not through direct interaction with the TMM receptor. It is homologous to known stomatal regulators EPF1 and EPF2.; CHALLAH (CHAL); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: negative regulation of stomatal complex development; EXPRESSED IN: midvein, hypocotyl, fruit proximal end, endosperm; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14723.1). & (reliability: 230.0) & (original description: Putative CHAL, Description = Allergen-related family protein, PFAM = PF17181)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf03893_370308-373249' '(gnl|cdd|84754 : 139.0) no description available & (at1g70890 : 90.5) MLP-like protein 43 (MLP43); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.5); Has 440 Blast hits to 408 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 440; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative orf, Description = Orf protein, PFAM = PF00407)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf04526_62728-72906' '(at3g05950 : 224.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: sperm cell, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04200.1); Has 1545 Blast hits to 1539 proteins in 111 species: Archae - 0; Bacteria - 53; Metazoa - 0; Fungi - 32; Plants - 1447; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 178.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 109.0) no description available & (reliability: 448.0) & (original description: Putative Os02g0491800, Description = Putative germin-like protein 2-3, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf04526_72907-75118' '(at3g05950 : 201.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: sperm cell, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04200.1); Has 1545 Blast hits to 1539 proteins in 111 species: Archae - 0; Bacteria - 53; Metazoa - 0; Fungi - 32; Plants - 1447; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 172.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 106.0) no description available & (reliability: 402.0) & (original description: Putative GER1, Description = Putative germin-like protein 2-1, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf04633_220271-236811' '(at5g14680 : 289.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G01520.1); Has 2663 Blast hits to 2654 proteins in 727 species: Archae - 164; Bacteria - 1702; Metazoa - 92; Fungi - 33; Plants - 646; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 578.0) & (original description: Putative At3g01520, Description = Universal stress protein A-like protein, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf04660_106727-108710' '(q41495|st14_soltu : 258.0) STS14 protein precursor - Solanum tuberosum (Potato) & (at5g66590 : 189.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related (InterPro:IPR001283), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G57625.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29108 : 124.0) no description available & (gnl|cdd|38227 : 98.0) no description available & (reliability: 378.0) & (original description: Putative BnaA09g07820D, Description = BnaA09g07820D protein, PFAM = PF00188)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf05231_234857-245515' '(at2g47710 : 178.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49050.1); Has 2830 Blast hits to 2747 proteins in 619 species: Archae - 112; Bacteria - 1833; Metazoa - 129; Fungi - 32; Plants - 667; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|30165 : 84.8) no description available & (reliability: 356.0) & (original description: Putative USP, Description = Universal stress protein, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf05279_580878-589575' '(at2g21620 : 246.0) Encodes gene that is induced in response to dessication; mRNA expression is seen 10 and 24 hrs after start of dessication treatment.; RD2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to desiccation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G11930.1); Has 1098 Blast hits to 1097 proteins in 198 species: Archae - 70; Bacteria - 241; Metazoa - 121; Fungi - 60; Plants - 588; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative Rd2, Description = Response to dessication 2, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf05304_520401-524205' '(at1g44760 : 224.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT1G69080.1); Has 216 Blast hits to 216 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 214; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative BnaC06g00720D, Description = BnaC06g00720D protein, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf05306_263311-266536' '(at3g09590 : 111.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G02730.1); Has 3024 Blast hits to 2931 proteins in 377 species: Archae - 0; Bacteria - 64; Metazoa - 1633; Fungi - 327; Plants - 888; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (p07053|pr1b_tobac : 93.6) Pathogenesis-related protein 1B precursor (PR-1B) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|38227 : 91.9) no description available & (gnl|cdd|47528 : 88.9) no description available & (reliability: 214.0) & (original description: Putative At3g09590, Description = BnaC03g35900D protein, PFAM = PF00188)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf05469_217479-220081' '(at2g40330 : 161.0) Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.; PYR1-like 6 (PYL6); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT5G05440.1); Has 471 Blast hits to 471 proteins in 38 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 2; Plants - 458; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative PYL11, Description = Abscisic acid receptor PYL11, PFAM = PF10604)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf05469_217491-220027' '(at2g40330 : 157.0) Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.; PYR1-like 6 (PYL6); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT5G05440.1); Has 471 Blast hits to 471 proteins in 38 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 2; Plants - 458; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative PYL4, Description = Abscisic acid receptor, PFAM = PF10604)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf05860_201644-207179' '(at5g61750 : 196.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: inflorescence meristem, hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT5G39180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p45852|glp1_mescr : 132.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 81.5) no description available & (reliability: 392.0) & (original description: Putative Os11g0537350, Description = Germin-like protein 11-1, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf05932_378488-381730' '(q9spv5|nec1_nicpl : 305.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 260.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 106.0) no description available & (reliability: 520.0) & (original description: Putative NECI, Description = Nectarin-1, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf05932_489418-494972' '(q9spv5|nec1_nicpl : 233.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 215.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 101.0) no description available & (reliability: 430.0) & (original description: Putative GER1, Description = Germin-like protein, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf05932_489562-522189' '(q9spv5|nec1_nicpl : 229.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09560 : 211.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|84597 : 99.6) no description available & (reliability: 422.0) & (original description: Putative GER1, Description = Germin-like protein, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf06378_189199-250118' '(at2g40330 : 243.0) Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.; PYR1-like 6 (PYL6); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT5G05440.1); Has 471 Blast hits to 471 proteins in 38 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 2; Plants - 458; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative PYL6, Description = Abscisic acid receptor PYL6, PFAM = PF10604)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf06493_34085-37544' '(at5g15780 : 139.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); Has 85252 Blast hits to 38354 proteins in 1825 species: Archae - 258; Bacteria - 17925; Metazoa - 33727; Fungi - 8101; Plants - 11894; Viruses - 2873; Other Eukaryotes - 10474 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative BnaA02g02790D, Description = BnaA02g02790D protein, PFAM = PF01190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf06552_229578-232836' '(at4g08685 : 120.0) Encodes a protein, expressed in leaves, with similarity to pollen allergens.; SAH7; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT1G78040.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85297 : 110.0) no description available & (p33050|psc13_maize : 99.0) Pollen-specific protein C13 precursor - Zea mays (Maize) & (reliability: 240.0) & (original description: Putative DFC, Description = Pollen-specific protein C13, putative, PFAM = PF01190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf06570_590230-593756' '(gnl|cdd|85297 : 117.0) no description available & (q03211|pexlp_tobac : 114.0) Pistil-specific extensin-like protein precursor (PELP) - Nicotiana tabacum (Common tobacco) & (at2g34700 : 108.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: arabinogalactan protein 31 (TAIR:AT1G28290.1); Has 194 Blast hits to 194 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 194; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative PELP, Description = Pistil-specific extensin-like protein, PFAM = PF01190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf06674_487379-490622' '(at5g15780 : 139.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); Has 85252 Blast hits to 38354 proteins in 1825 species: Archae - 258; Bacteria - 17925; Metazoa - 33727; Fungi - 8101; Plants - 11894; Viruses - 2873; Other Eukaryotes - 10474 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative At5g15780, Description = Putative ovule protein, PFAM = PF01190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf06775_119301-121609' '(gnl|cdd|70078 : 114.0) no description available & (at1g01170 : 108.0) Protein of unknown function (DUF1138); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1138 (InterPro:IPR009515); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1138) (TAIR:AT4G00860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative ATOZI1, Description = AT0ZI1 protein, PFAM = PF06592)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf06779_411711-414964' '(at3g05950 : 192.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: sperm cell, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04200.1); Has 1545 Blast hits to 1539 proteins in 111 species: Archae - 0; Bacteria - 53; Metazoa - 0; Fungi - 32; Plants - 1447; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p15290|ger2_wheat : 148.0) Oxalate oxidase GF-2.8 precursor (EC 1.2.3.4) (Germin GF-2.8) - Triticum aestivum (Wheat) & (gnl|cdd|84597 : 89.6) no description available & (reliability: 384.0) & (original description: Putative Os02g0491600, Description = Putative germin-like protein 2-1, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf06779_420744-423980' '(at3g05950 : 221.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: sperm cell, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04200.1); Has 1545 Blast hits to 1539 proteins in 111 species: Archae - 0; Bacteria - 53; Metazoa - 0; Fungi - 32; Plants - 1447; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 178.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 99.2) no description available & (reliability: 442.0) & (original description: Putative NEC1c, Description = Nectarin 1c, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf07096_128938-132296' '(gnl|cdd|84754 : 148.0) no description available & (at1g70850 : 122.0) MLP-like protein 34 (MLP34); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative orf, Description = Orf protein, PFAM = PF00407)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf07303_101146-109519' '(at1g11360 : 229.0) Adenine nucleotide alpha hydrolases-like superfamily protein; INVOLVED IN: response to stress; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT4G27320.1). & (reliability: 458.0) & (original description: Putative ap1, Description = Adenine nucleotide alpha hydrolases-like superfamily, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf07314_407471-410478' '(o49813|olee1_betve : 154.0) Olee1-like protein precursor - Betula verrucosa (White birch) (Betula pendula) & (gnl|cdd|85297 : 140.0) no description available & (at4g18596 : 136.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: extracellular space, endomembrane system; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041), Allergen Ole e 1, conserved site (InterPro:IPR006040); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT5G45880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative LAT52, Description = Olee1-like protein, PFAM = PF01190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf07321_34160-36932' '(at5g39130 : 279.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 2 (TAIR:AT5G39190.1); Has 1495 Blast hits to 1489 proteins in 85 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 27; Plants - 1451; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 228.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 110.0) no description available & (reliability: 558.0) & (original description: Putative GLP5A, Description = Germin-like protein subfamily 1 member 20, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf07321_50608-53378' '(at5g39190 : 285.0) germin-like protein (GLP2a); germin-like protein 2 (GER2); CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT5G39160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p45852|glp1_mescr : 221.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 110.0) no description available & (reliability: 570.0) & (original description: Putative GLP5A, Description = Germin-like protein subfamily 1 member 20, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf08157_246443-249801' '(at1g11360 : 262.0) Adenine nucleotide alpha hydrolases-like superfamily protein; INVOLVED IN: response to stress; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT4G27320.1). & (gnl|cdd|30165 : 81.3) no description available & (reliability: 524.0) & (original description: Putative ap1, Description = Adenine nucleotide alpha hydrolases-like superfamily, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf08191_235900-239077' '(gnl|cdd|85297 : 145.0) no description available & (o49813|olee1_betve : 127.0) Olee1-like protein precursor - Betula verrucosa (White birch) (Betula pendula) & (at1g29140 : 117.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT4G18596.1); Has 312 Blast hits to 312 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 312; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative LAT52, Description = Anther-specific protein LAT52, PFAM = PF01190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf08447_261110-263721' '(gnl|cdd|84754 : 162.0) no description available & (at1g70840 : 144.0) MLP-like protein 31 (MLP31); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.3); Has 485 Blast hits to 453 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 485; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative MLP31, Description = MLP-like protein 31, PFAM = PF00407)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf08470_626504-628899' '(at4g14723 : 93.6) BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative CHAL, Description = Epidermal patterning factor-like protein, PFAM = PF17181)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf08592_180366-191043' '(at1g11360 : 206.0) Adenine nucleotide alpha hydrolases-like superfamily protein; INVOLVED IN: response to stress; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT4G27320.1). & (gnl|cdd|84883 : 84.1) no description available & (reliability: 412.0) & (original description: Putative ap1, Description = Adenine nucleotide alpha hydrolases-like superfamily, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf08843_7719-10474' '(at2g34700 : 111.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: arabinogalactan protein 31 (TAIR:AT1G28290.1); Has 194 Blast hits to 194 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 194; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q03211|pexlp_tobac : 98.6) Pistil-specific extensin-like protein precursor (PELP) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|85297 : 98.1) no description available & (reliability: 222.0) & (original description: Putative PELP, Description = Pistil-specific extensin-like protein, PFAM = PF01190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf09455_133796-136473' '(at3g09590 : 132.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G02730.1); Has 3024 Blast hits to 2931 proteins in 377 species: Archae - 0; Bacteria - 64; Metazoa - 1633; Fungi - 327; Plants - 888; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (q00008|prms_maize : 127.0) Pathogenesis-related protein PRMS precursor - Zea mays (Maize) & (gnl|cdd|29108 : 121.0) no description available & (gnl|cdd|38227 : 109.0) no description available & (reliability: 258.0) & (original description: Putative PGSC0003DMG400023936, Description = BnaC03g35900D protein, PFAM = PF00188)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf09698_11536-13991' '(gnl|cdd|70078 : 113.0) no description available & (at1g01170 : 105.0) Protein of unknown function (DUF1138); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1138 (InterPro:IPR009515); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1138) (TAIR:AT4G00860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative ATOZI1, Description = AT0ZI1 protein, PFAM = PF06592)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf09910_92306-102793' '(at5g39120 : 92.4) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT5G39150.1); Has 1513 Blast hits to 1505 proteins in 94 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 39; Plants - 1449; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative NEC1b, Description = Nectarin 1b, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf10169_511488-514009' '(at5g05500 : 199.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT2G34700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative PGSC0003DMG400030033, Description = At5g05500, PFAM = PF01190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf11037_11015-15283' '(at2g47710 : 205.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49050.1); Has 2830 Blast hits to 2747 proteins in 619 species: Archae - 112; Bacteria - 1833; Metazoa - 129; Fungi - 32; Plants - 667; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (reliability: 410.0) & (original description: Putative USP, Description = Universal stress protein A-like protein, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf11182_18090-23457' '(at1g68300 : 158.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G11930.4); Has 7821 Blast hits to 7529 proteins in 1691 species: Archae - 688; Bacteria - 6019; Metazoa - 129; Fungi - 89; Plants - 708; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). & (gnl|cdd|30165 : 99.0) no description available & (reliability: 316.0) & (original description: Putative Sb0139s002020, Description = Putative uncharacterized protein Sb0139s002020, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf11283_70239-73353' '(gnl|cdd|84754 : 119.0) no description available & (at1g70840 : 102.0) MLP-like protein 31 (MLP31); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.3); Has 485 Blast hits to 453 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 485; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative MLP, Description = Putative major latex-like protein, PFAM = PF00407)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf11546_54365-57524' '(gnl|cdd|84754 : 122.0) no description available & (at1g70840 : 102.0) MLP-like protein 31 (MLP31); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 28 (TAIR:AT1G70830.3); Has 485 Blast hits to 453 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 485; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative NtSN1b, Description = Putative PR-10 type pathogenesis-related protein, PFAM = PF00407)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf11884_43888-46565' '(at1g18980 : 233.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower, pollen tube; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: germin-like protein 4 (TAIR:AT1G18970.1); Has 1578 Blast hits to 1564 proteins in 115 species: Archae - 0; Bacteria - 82; Metazoa - 0; Fungi - 29; Plants - 1449; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (p45851|oxo2_horvu : 209.0) Oxalate oxidase 2 precursor (EC 1.2.3.4) (Germin) - Hordeum vulgare (Barley) & (gnl|cdd|84597 : 93.8) no description available & (reliability: 466.0) & (original description: Putative At1g18980, Description = Germin-like protein subfamily T member 2, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf12540_1-4216' '(at5g54855 : 214.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative At5g54855, Description = AT1g27100/T7N9_16, PFAM = PF01190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf13118_1871-5453' '(at2g47710 : 222.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49050.1); Has 2830 Blast hits to 2747 proteins in 619 species: Archae - 112; Bacteria - 1833; Metazoa - 129; Fungi - 32; Plants - 667; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (reliability: 444.0) & (original description: Putative USP, Description = Universal stress protein, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf13518_53297-59268' '(at5g54855 : 211.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative Sb07g009530, Description = Putative uncharacterized protein Sb07g009530, PFAM = PF01190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf16189_81188-83946' '(at5g61750 : 202.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: inflorescence meristem, hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT5G39180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p45852|glp1_mescr : 134.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 84.6) no description available & (reliability: 404.0) & (original description: Putative Os11g0537350, Description = Germin-like protein 11-1, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf16733_231143-234640' '(at5g17390 : 171.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G03290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative MRH6, Description = At2g03720, PFAM = PF00582)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf17640_7844-10476' '(at2g38310 : 230.0) Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.; PYR1-like 4 (PYL4); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT5G05440.1); Has 467 Blast hits to 463 proteins in 53 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 2; Plants - 445; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative PYL13, Description = Abscisic acid receptor PYL13, PFAM = PF10604)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf20364_9942-12701' '(at3g05950 : 201.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: sperm cell, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04200.1); Has 1545 Blast hits to 1539 proteins in 111 species: Archae - 0; Bacteria - 53; Metazoa - 0; Fungi - 32; Plants - 1447; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p45852|glp1_mescr : 167.0) Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|84597 : 94.2) no description available & (reliability: 402.0) & (original description: Putative GER1, Description = Germin-like protein 1, PFAM = PF00190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf23606_44482-47003' '(q40374|pr1_medtr : 202.0) Pathogenesis-related protein PR-1 precursor - Medicago truncatula (Barrel medic) & (at4g25790 : 200.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G57625.1); Has 3181 Blast hits to 3018 proteins in 396 species: Archae - 2; Bacteria - 78; Metazoa - 1651; Fungi - 340; Plants - 995; Viruses - 8; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|29108 : 133.0) no description available & (gnl|cdd|38227 : 115.0) no description available & (reliability: 400.0) & (original description: Putative pr1, Description = Pathogenesis-related protein 1, PFAM = PF00188)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf23892_134860-174315' '(at4g08685 : 147.0) Encodes a protein, expressed in leaves, with similarity to pollen allergens.; SAH7; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT1G78040.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85297 : 121.0) no description available & (p33050|psc13_maize : 120.0) Pollen-specific protein C13 precursor - Zea mays (Maize) & (reliability: 294.0) & (original description: Putative DFC, Description = Protein DOWNSTREAM OF FLC, PFAM = PF01190)' T '20.2.99' 'stress.abiotic.unspecified' 'niben101scf34542_78773-82174' '(at2g26040 : 240.0) Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.; PYR1-like 2 (PYL2); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: PYR1-like 3 (TAIR:AT1G73000.1); Has 445 Blast hits to 441 proteins in 38 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 439; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 480.0) & (original description: Putative PYL2, Description = Abscisic acid receptor PYL2, PFAM = PF10604)' T '20.2.1001' 'stress.abiotic' 'betaine' '' M '20.1001' 'stress' 'ascorbate' 'hormone metabolism.ethylene; stress; redox' M '20.1002' 'stress' 'dehydroascorbate' 'stress; redox regulation' M '20.1003' 'stress' 'proline' 'amino acid synthesis.proline; amino acid degradation.proline; stress' M '21' 'redox' '' '' '21.1' 'redox.thioredoxin' 'nbv0.3scaffold2684_41262-50705' '(at2g18990 : 231.0) thioredoxin domain-containing protein 9 homolog (TXND9); INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G25580.1); Has 1035 Blast hits to 1035 proteins in 264 species: Archae - 10; Bacteria - 75; Metazoa - 396; Fungi - 154; Plants - 221; Viruses - 0; Other Eukaryotes - 179 (source: NCBI BLink). & (gnl|cdd|36885 : 228.0) no description available & (gnl|cdd|48538 : 164.0) no description available & (reliability: 456.0) & (original description: Putative At2g18990, Description = Thioredoxin domain-containing protein 9 homolog, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'nbv0.3scaffold3009_23110-33729' '(at3g20560 : 692.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin).; PDI-like 5-3 (PDIL5-3); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336), Protein of unknown function DUF1692 (InterPro:IPR012936); BEST Arabidopsis thaliana protein match is: Thioredoxin protein with domain of unknown function (DUF1692) (TAIR:AT1G50950.1); Has 5147 Blast hits to 3670 proteins in 375 species: Archae - 8; Bacteria - 112; Metazoa - 2494; Fungi - 904; Plants - 886; Viruses - 3; Other Eukaryotes - 740 (source: NCBI BLink). & (gnl|cdd|87414 : 190.0) no description available & (gnl|cdd|37878 : 173.0) no description available & (reliability: 1290.0) & (original description: Putative PDI5, Description = Protein disulfide-isomerase 5-4, PFAM = PF07970;PF00085;PF13850)' T '21.1' 'redox.thioredoxin' 'nbv0.3scaffold14090_8677-11816' '(at5g61440 : 205.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast.; atypical CYS HIS rich thioredoxin 5 (ACHT5); INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 4 (TAIR:AT1G08570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36125 : 91.9) no description available & (reliability: 410.0) & (original description: Putative trx2, Description = Thioredoxin-like 1-2, chloroplastic, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'nbv0.3scaffold14948_1-2790' '(at5g61440 : 241.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast.; atypical CYS HIS rich thioredoxin 5 (ACHT5); INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 4 (TAIR:AT1G08570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36125 : 108.0) no description available & (reliability: 482.0) & (original description: Putative trx2, Description = Thioredoxin 2, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'nbv0.3scaffold25347_7323-11809' '(at1g76080 : 390.0) Encodes a thioredoxin localized in chloroplast stroma. Known as CDSP32 (CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD).; chloroplastic drought-induced stress protein of 32 kD (CDSP32); INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G19730.1); Has 3263 Blast hits to 3026 proteins in 903 species: Archae - 63; Bacteria - 1344; Metazoa - 643; Fungi - 77; Plants - 661; Viruses - 3; Other Eukaryotes - 472 (source: NCBI BLink). & (gnl|cdd|48534 : 161.0) no description available & (reliability: 780.0) & (original description: Putative CDSP32, Description = Thioredoxin-like protein CDSP32, chloroplastic, PFAM = PF00085;PF00085)' T '21.1' 'redox.thioredoxin' 'nbv0.3scaffold35574_12493-20029' '(gnl|cdd|36522 : 290.0) no description available & (at4g22670 : 238.0) HSP70-interacting protein 1 (HIP1); FUNCTIONS IN: binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetraticopeptide domain-containing thioredoxin (TAIR:AT3G17880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29151 : 80.1) no description available & (reliability: 440.0) & (original description: Putative st13, Description = Hsc70-interacting protein, PFAM = PF13181)' T '21.1' 'redox.thioredoxin' 'nbv0.3scaffold40369_13009-18924' '(at1g53300 : 651.0) tetratricopetide-repeat thioredoxin-like 1 (TTL1); FUNCTIONS IN: binding; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide TPR-1 (InterPro:IPR001440), Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: tetratricopetide-repeat thioredoxin-like 2 (TAIR:AT3G14950.1); Has 32097 Blast hits to 15852 proteins in 1300 species: Archae - 552; Bacteria - 6287; Metazoa - 8110; Fungi - 3609; Plants - 2668; Viruses - 128; Other Eukaryotes - 10743 (source: NCBI BLink). & (gnl|cdd|35770 : 128.0) no description available & (gnl|cdd|48496 : 89.9) no description available & (reliability: 1302.0) & (original description: Putative TTL1, Description = TPR repeat-containing thioredoxin TTL1, PFAM = PF00085;PF00515;PF14559)' T '21.1' 'redox.thioredoxin' 'nbv0.3scaffold54052_3154-11079' '(gnl|cdd|36522 : 300.0) no description available & (at4g22670 : 226.0) HSP70-interacting protein 1 (HIP1); FUNCTIONS IN: binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetraticopeptide domain-containing thioredoxin (TAIR:AT3G17880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative ST13P4, Description = Putative protein FAM10A4, PFAM = PF13181)' T '21.1' 'redox.thioredoxin' 'nbv0.3scaffold55420_2420-6050' '(at3g08710 : 130.0) Associated to plasma membrane. Moves cell to cell, suggesting a role in intercellular communication.; thioredoxin H-type 9 (TH9); INVOLVED IN: cell communication; LOCATED IN: cytosol, nucleus, plasma membrane, plastid; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G56420.1); Has 16223 Blast hits to 16135 proteins in 2903 species: Archae - 224; Bacteria - 9339; Metazoa - 1540; Fungi - 676; Plants - 1413; Viruses - 3; Other Eukaryotes - 3028 (source: NCBI BLink). & (gnl|cdd|36125 : 121.0) no description available & (p29449|trxh1_tobac : 97.4) Thioredoxin H-type 1 (TRX-H1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|48496 : 96.4) no description available & (reliability: 260.0) & (original description: Putative Os05g0480200, Description = Thioredoxin H5, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'nbv0.3scaffold66837_1472-7629' '(at4g29670 : 252.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.; atypical CYS HIS rich thioredoxin 2 (ACHT2); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 1 (TAIR:AT4G26160.1); Has 5219 Blast hits to 5209 proteins in 1205 species: Archae - 70; Bacteria - 1917; Metazoa - 873; Fungi - 538; Plants - 961; Viruses - 3; Other Eukaryotes - 857 (source: NCBI BLink). & (gnl|cdd|36125 : 109.0) no description available & (reliability: 504.0) & (original description: Putative trx2, Description = Thioredoxin, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'nbv0.3scaffold69163_557-9209' '(q9xgs0|trxm_brana : 155.0) Thioredoxin M-type, chloroplast precursor (TRX-M) - Brassica napus (Rape) & (at4g03520 : 145.0) chloroplast localized thioredoxin, similar to prokaryotic types.; ATHM2; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766); BEST Arabidopsis thaliana protein match is: thioredoxin M-type 1 (TAIR:AT1G03680.1); Has 9201 Blast hits to 9185 proteins in 2237 species: Archae - 146; Bacteria - 6732; Metazoa - 24; Fungi - 110; Plants - 264; Viruses - 0; Other Eukaryotes - 1925 (source: NCBI BLink). & (gnl|cdd|36128 : 130.0) no description available & (gnl|cdd|84504 : 122.0) no description available & (reliability: 290.0) & (original description: Putative trx, Description = Thioredoxin, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'nbv0.3scaffold72231_4222-8661' '(at5g06430 : 191.0) Thioredoxin superfamily protein; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G37200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative BnaC09g49120D, Description = BnaC09g49120D protein, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'nbv0.5scaffold1666_364578-382456' '(at3g17880 : 382.0) Encodes a thioredoxin-like disulfide reductase. The protein interacts with the yeast Hsp70 protein Ssb2 in vitro. This interaction is sensitive to the redox status of the thioredoxin domain of AtTDX.; tetraticopeptide domain-containing thioredoxin (TDX); FUNCTIONS IN: protein binding, oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Tetratricopeptide repeat-containing (InterPro:IPR013026), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: HSP70-interacting protein 1 (TAIR:AT4G22670.1); Has 25327 Blast hits to 23050 proteins in 2977 species: Archae - 386; Bacteria - 12482; Metazoa - 3860; Fungi - 1433; Plants - 2443; Viruses - 7; Other Eukaryotes - 4716 (source: NCBI BLink). & (gnl|cdd|36522 : 225.0) no description available & (q42443|trxh_orysa : 117.0) Thioredoxin H-type (TRX-H) (Phloem sap 13 kDa protein 1) - Oryza sativa (Rice) & (gnl|cdd|48496 : 108.0) no description available & (reliability: 764.0) & (original description: Putative TDX, Description = TPR repeat-containing thioredoxin TDX, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'nbv0.5scaffold1794_190090-197583' '(at2g41680 : 547.0) Encodes a NADPH thioredoxin reductase involved in chloroplast protection against oxidative damage.; NADPH-dependent thioredoxin reductase C (NTRC); FUNCTIONS IN: thioredoxin-disulfide reductase activity; INVOLVED IN: hydrogen peroxide catabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Thioredoxin fold (InterPro:IPR012335), Thioredoxin reductase (InterPro:IPR005982), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Pyridine nucleotide-disulphide oxidoreductase, class-II, active site (InterPro:IPR008255), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: NADPH-dependent thioredoxin reductase A (TAIR:AT2G17420.1); Has 36111 Blast hits to 36072 proteins in 3191 species: Archae - 926; Bacteria - 24476; Metazoa - 1051; Fungi - 742; Plants - 985; Viruses - 7; Other Eukaryotes - 7924 (source: NCBI BLink). & (gnl|cdd|35625 : 459.0) no description available & (gnl|cdd|30838 : 317.0) no description available & (reliability: 1094.0) & (original description: Putative trxB, Description = Thioredoxin reductase, PFAM = PF07992)' T '21.1' 'redox.thioredoxin' 'nbv0.5scaffold3621_130018-134351' '(at1g76760 : 167.0) Encodes a y-type thioredoxin (Trx-y1) localized in chloroplast stroma.; thioredoxin Y1 (TY1); FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: glycerol ether metabolic process, cell redox homeostasis; LOCATED IN: chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin (InterPro:IPR005746), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin Y2 (TAIR:AT1G43560.1); Has 23491 Blast hits to 21806 proteins in 3039 species: Archae - 310; Bacteria - 12245; Metazoa - 3466; Fungi - 1226; Plants - 1976; Viruses - 18; Other Eukaryotes - 4250 (source: NCBI BLink). & (gnl|cdd|36128 : 130.0) no description available & (gnl|cdd|84504 : 114.0) no description available & (p23400|trxm_chlre : 87.8) Thioredoxin M-type, chloroplast precursor (TRX-M) (Thioredoxin CH2) - Chlamydomonas reinhardtii & (reliability: 334.0) & (original description: Putative trx, Description = Thioredoxin, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'nbv0.5scaffold3668_8169-19115' '(at3g15360 : 180.0) encodes a prokaryotic thioredoxin; thioredoxin M-type 4 (TRX-M4); FUNCTIONS IN: enzyme activator activity; INVOLVED IN: response to oxidative stress, positive regulation of catalytic activity; LOCATED IN: thylakoid, chloroplast thylakoid membrane, cell wall, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin (InterPro:IPR005746), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin M-type 1 (TAIR:AT1G03680.1); Has 22907 Blast hits to 21478 proteins in 3001 species: Archae - 325; Bacteria - 11943; Metazoa - 2959; Fungi - 1292; Plants - 2075; Viruses - 15; Other Eukaryotes - 4298 (source: NCBI BLink). & (p48384|trxm_pea : 169.0) Thioredoxin M-type, chloroplast precursor (TRX-M) - Pisum sativum (Garden pea) & (gnl|cdd|36128 : 143.0) no description available & (gnl|cdd|84504 : 128.0) no description available & (reliability: 360.0) & (original description: Putative TRM1, Description = Thioredoxin M-type, chloroplastic, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'nbv0.5scaffold5435_9015-12852' '(at5g51010 : 136.0) Rubredoxin-like superfamily protein; FUNCTIONS IN: electron carrier activity, metal ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubredoxin-type Fe(Cys)4 protein (InterPro:IPR004039); BEST Arabidopsis thaliana protein match is: rubredoxin family protein (TAIR:AT5G17170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative At5g51010, Description = Putative uncharacterized protein At5g51010, PFAM = )' T '21.1' 'redox.thioredoxin' 'niben044scf00002284ctg025_19832-25894' '(at4g29670 : 249.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.; atypical CYS HIS rich thioredoxin 2 (ACHT2); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 1 (TAIR:AT4G26160.1); Has 5219 Blast hits to 5209 proteins in 1205 species: Archae - 70; Bacteria - 1917; Metazoa - 873; Fungi - 538; Plants - 961; Viruses - 3; Other Eukaryotes - 857 (source: NCBI BLink). & (gnl|cdd|36125 : 111.0) no description available & (reliability: 498.0) & (original description: Putative trx2, Description = Thioredoxin, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben044scf00003287ctg005_501-8674' '(at3g03860 : 265.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.; APR-like 5 (APRL5); INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: APR-like 7 (TAIR:AT5G18120.1); Has 278 Blast hits to 278 proteins in 73 species: Archae - 0; Bacteria - 38; Metazoa - 82; Fungi - 10; Plants - 137; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37851 : 171.0) no description available & (gnl|cdd|48548 : 119.0) no description available & (reliability: 530.0) & (original description: Putative APRL5, Description = 5'-adenylylsulfate reductase-like 5, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben044scf00005042ctg007_297-3514' '(at5g61440 : 246.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast.; atypical CYS HIS rich thioredoxin 5 (ACHT5); INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 4 (TAIR:AT1G08570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36125 : 110.0) no description available & (reliability: 492.0) & (original description: Putative trx2, Description = Thioredoxin 2, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben044scf00010832ctg003_1515-12927' '(at3g08710 : 203.0) Associated to plasma membrane. Moves cell to cell, suggesting a role in intercellular communication.; thioredoxin H-type 9 (TH9); INVOLVED IN: cell communication; LOCATED IN: cytosol, nucleus, plasma membrane, plastid; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G56420.1); Has 16223 Blast hits to 16135 proteins in 2903 species: Archae - 224; Bacteria - 9339; Metazoa - 1540; Fungi - 676; Plants - 1413; Viruses - 3; Other Eukaryotes - 3028 (source: NCBI BLink). & (gnl|cdd|36125 : 128.0) no description available & (q42443|trxh_orysa : 107.0) Thioredoxin H-type (TRX-H) (Phloem sap 13 kDa protein 1) - Oryza sativa (Rice) & (gnl|cdd|48496 : 98.8) no description available & (reliability: 406.0) & (original description: Putative TRX9, Description = Thioredoxin H9, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben044scf00013184ctg010_9088-13764' '(q9xgs0|trxm_brana : 181.0) Thioredoxin M-type, chloroplast precursor (TRX-M) - Brassica napus (Rape) & (at3g15360 : 180.0) encodes a prokaryotic thioredoxin; thioredoxin M-type 4 (TRX-M4); FUNCTIONS IN: enzyme activator activity; INVOLVED IN: response to oxidative stress, positive regulation of catalytic activity; LOCATED IN: thylakoid, chloroplast thylakoid membrane, cell wall, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin (InterPro:IPR005746), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin M-type 1 (TAIR:AT1G03680.1); Has 22907 Blast hits to 21478 proteins in 3001 species: Archae - 325; Bacteria - 11943; Metazoa - 2959; Fungi - 1292; Plants - 2075; Viruses - 15; Other Eukaryotes - 4298 (source: NCBI BLink). & (gnl|cdd|36128 : 143.0) no description available & (gnl|cdd|84504 : 129.0) no description available & (reliability: 360.0) & (original description: Putative trx, Description = Thioredoxin, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben044scf00013336ctg014_3450-9966' '(at4g29670 : 250.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.; atypical CYS HIS rich thioredoxin 2 (ACHT2); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 1 (TAIR:AT4G26160.1); Has 5219 Blast hits to 5209 proteins in 1205 species: Archae - 70; Bacteria - 1917; Metazoa - 873; Fungi - 538; Plants - 961; Viruses - 3; Other Eukaryotes - 857 (source: NCBI BLink). & (gnl|cdd|36125 : 110.0) no description available & (reliability: 500.0) & (original description: Putative trx2, Description = Thioredoxin-like 2, chloroplastic, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben044scf00014416ctg005_3794-8848' '(at3g53220 : 171.0) Thioredoxin superfamily protein; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin 2 (TAIR:AT5G39950.1); Has 8343 Blast hits to 8341 proteins in 2235 species: Archae - 86; Bacteria - 4305; Metazoa - 749; Fungi - 428; Plants - 986; Viruses - 2; Other Eukaryotes - 1787 (source: NCBI BLink). & (gnl|cdd|36125 : 86.9) no description available & (gnl|cdd|48496 : 84.1) no description available & (reliability: 342.0) & (original description: Putative Os04g0560200, Description = Thioredoxin-like 3-3, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben044scf00018030ctg001_371-5897' '(at2g04700 : 215.0) ferredoxin thioredoxin reductase catalytic beta chain family protein; FUNCTIONS IN: ferredoxin:thioredoxin reductase activity, ferredoxin reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin thioredoxin reductase, beta subunit (InterPro:IPR004209); Has 267 Blast hits to 267 proteins in 113 species: Archae - 18; Bacteria - 139; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (o49856|ftrc_soybn : 204.0) Ferredoxin-thioredoxin reductase catalytic chain, chloroplast precursor (EC 1.18.-.-) (FTR-C) - Glycine max (Soybean) & (gnl|cdd|66604 : 180.0) no description available & (reliability: 430.0) & (original description: Putative FTRC, Description = Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic, PFAM = PF02943)' T '21.1' 'redox.thioredoxin' 'niben044scf00018815ctg000_3148-11716' '(gnl|cdd|36125 : 125.0) no description available & (at5g39950 : 119.0) encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.; thioredoxin 2 (TRX2); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: N-terminal protein myristoylation, sulfate assimilation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 7 (TAIR:AT1G59730.1); Has 19714 Blast hits to 19583 proteins in 2950 species: Archae - 262; Bacteria - 11021; Metazoa - 1828; Fungi - 880; Plants - 1790; Viruses - 14; Other Eukaryotes - 3919 (source: NCBI BLink). & (gnl|cdd|48496 : 116.0) no description available & (q39362|trxh2_brana : 99.0) Thioredoxin H-type 2 (TRX-H-2) - Brassica napus (Rape) & (reliability: 238.0) & (original description: Putative trh2, Description = Thioredoxin, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben044scf00018915ctg010_1228-5436' '(at1g50320 : 184.0) encodes a prokaryotic thioredoxin; thioredoxin X (THX); FUNCTIONS IN: enzyme activator activity; INVOLVED IN: positive regulation of catalytic activity; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin Y1 (TAIR:AT1G76760.1); Has 20779 Blast hits to 19654 proteins in 2968 species: Archae - 276; Bacteria - 11383; Metazoa - 2412; Fungi - 1075; Plants - 1697; Viruses - 7; Other Eukaryotes - 3929 (source: NCBI BLink). & (gnl|cdd|84504 : 115.0) no description available & (gnl|cdd|36128 : 101.0) no description available & (p23400|trxm_chlre : 87.0) Thioredoxin M-type, chloroplast precursor (TRX-M) (Thioredoxin CH2) - Chlamydomonas reinhardtii & (reliability: 368.0) & (original description: Putative ATHX, Description = Thioredoxin X, chloroplastic, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben044scf00020851ctg012_6356-13730' '(at2g18990 : 239.0) thioredoxin domain-containing protein 9 homolog (TXND9); INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G25580.1); Has 1035 Blast hits to 1035 proteins in 264 species: Archae - 10; Bacteria - 75; Metazoa - 396; Fungi - 154; Plants - 221; Viruses - 0; Other Eukaryotes - 179 (source: NCBI BLink). & (gnl|cdd|36885 : 224.0) no description available & (gnl|cdd|48538 : 162.0) no description available & (reliability: 474.0) & (original description: Putative At2g18990, Description = Thioredoxin domain-containing protein 9 homolog, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben044scf00021750ctg003_5-10331' '(gnl|cdd|36522 : 288.0) no description available & (at4g22670 : 231.0) HSP70-interacting protein 1 (HIP1); FUNCTIONS IN: binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetraticopeptide domain-containing thioredoxin (TAIR:AT3G17880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative STI1, Description = Putative Stress-induced-phosphoprotein 1, PFAM = PF13181)' T '21.1' 'redox.thioredoxin' 'niben044scf00029294ctg000_1-2073' '(at5g08410 : 105.0) ferredoxin/thioredoxin reductase subunit A (variable subunit) 2 (FTRA2); FUNCTIONS IN: ferredoxin:thioredoxin reductase activity, catalytic activity, ferredoxin reductase activity; INVOLVED IN: photosynthesis, light reaction, photosynthesis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin thioredoxin reductase, alpha chain (InterPro:IPR004207), Electron transport accessory protein (InterPro:IPR008990); BEST Arabidopsis thaliana protein match is: ferredoxin/thioredoxin reductase subunit A (variable subunit) 1 (TAIR:AT5G23440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p80680|ftrv_maize : 90.9) Ferredoxin-thioredoxin reductase, variable chain (FTR-V) (Ferredoxin-thioredoxin reductase subunit A) (FTR-A) - Zea mays (Maize) & (gnl|cdd|86196 : 87.0) no description available & (reliability: 210.0) & (original description: Putative FTRV, Description = Ferredoxin-thioredoxin reductase, variable chain, PFAM = PF02941)' T '21.1' 'redox.thioredoxin' 'niben044scf00031786ctg003_8198-12419' '(at1g08570 : 259.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.; atypical CYS HIS rich thioredoxin 4 (ACHT4); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast membrane, chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 3 (TAIR:AT2G33270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36125 : 107.0) no description available & (reliability: 518.0) & (original description: Putative ACHT4, Description = Atypical CYS HIS rich thioredoxin 4, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben044scf00034204ctg000_1-1154' '(at2g15570 : 157.0) chloroplast protein similar to prokaryotic thioredoxin.; ATHM3; FUNCTIONS IN: enzyme activator activity; INVOLVED IN: positive regulation of catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin M-type 4 (TAIR:AT3G15360.1); Has 16998 Blast hits to 16795 proteins in 2911 species: Archae - 264; Bacteria - 9868; Metazoa - 1437; Fungi - 798; Plants - 1429; Viruses - 4; Other Eukaryotes - 3198 (source: NCBI BLink). & (gnl|cdd|36128 : 135.0) no description available & (p48384|trxm_pea : 114.0) Thioredoxin M-type, chloroplast precursor (TRX-M) - Pisum sativum (Garden pea) & (gnl|cdd|84504 : 101.0) no description available & (reliability: 314.0) & (original description: Putative GAT1, Description = Thioredoxin, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben044scf00041079ctg002_10385-16377' '(gnl|cdd|35625 : 519.0) no description available & (at2g17420 : 499.0) NADPH-dependent thioredoxin reductase, major cytosolic isoform; NADPH-dependent thioredoxin reductase A (NTRA); FUNCTIONS IN: thioredoxin-disulfide reductase activity; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, mitochondrial matrix; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II, active site (InterPro:IPR008255), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Thioredoxin reductase (InterPro:IPR005982); BEST Arabidopsis thaliana protein match is: NADPH-dependent thioredoxin reductase B (TAIR:AT4G35460.1); Has 20135 Blast hits to 20133 proteins in 2901 species: Archae - 588; Bacteria - 13597; Metazoa - 140; Fungi - 273; Plants - 163; Viruses - 0; Other Eukaryotes - 5374 (source: NCBI BLink). & (gnl|cdd|30838 : 323.0) no description available & (reliability: 998.0) & (original description: Putative NTR2, Description = Thioredoxin reductase 2, PFAM = PF07992)' T '21.1' 'redox.thioredoxin' 'niben044scf00041473ctg004_19-9008' '(at5g66410 : 243.0) Encodes a protein that functions in microtubule assembly. Plants with reduced levels of both PLP3a (At3g50960) and PLP3b show defects in cytokinesis, cortical microtubule array formation, oriented cell growth, and maintenance of proper ploidy.; phosducin-like protein 3 homolog (PLP3b); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: phosducin-like protein 3 homolog (TAIR:AT3G50960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36885 : 224.0) no description available & (gnl|cdd|48538 : 159.0) no description available & (reliability: 486.0) & (original description: Putative PLP3A, Description = Thioredoxin domain-containing protein PLP3A, PFAM = )' T '21.1' 'redox.thioredoxin' 'niben044scf00042864ctg001_4152-12679' '(at3g03860 : 225.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.; APR-like 5 (APRL5); INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: APR-like 7 (TAIR:AT5G18120.1); Has 278 Blast hits to 278 proteins in 73 species: Archae - 0; Bacteria - 38; Metazoa - 82; Fungi - 10; Plants - 137; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37851 : 164.0) no description available & (gnl|cdd|48548 : 120.0) no description available & (reliability: 450.0) & (original description: Putative APRL5, Description = 5'-adenylylsulfate reductase-like 5, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben044scf00055224ctg001_1-4936' '(at1g53300 : 678.0) tetratricopetide-repeat thioredoxin-like 1 (TTL1); FUNCTIONS IN: binding; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide TPR-1 (InterPro:IPR001440), Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: tetratricopetide-repeat thioredoxin-like 2 (TAIR:AT3G14950.1); Has 32097 Blast hits to 15852 proteins in 1300 species: Archae - 552; Bacteria - 6287; Metazoa - 8110; Fungi - 3609; Plants - 2668; Viruses - 128; Other Eukaryotes - 10743 (source: NCBI BLink). & (gnl|cdd|35770 : 135.0) no description available & (gnl|cdd|29151 : 85.9) no description available & (reliability: 1356.0) & (original description: Putative TTL3, Description = Inactive TPR repeat-containing thioredoxin TTL3, PFAM = PF00515;PF00085;PF13414)' T '21.1' 'redox.thioredoxin' 'niben101scf00090_711094-727369' '(at1g07700 : 211.0) Thioredoxin superfamily protein; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G19730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative At1g07700, Description = Thioredoxin-like 4, chloroplastic, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf00176_617703-629598' '(at1g11530 : 144.0) Encodes a monocysteinic thioredoxin, thioredoxin in which the second cysteine of the redox site is replaced by a serine, with low disulfide reductase but efficient disulfide isomerase activity.; C-terminal cysteine residue is changed to a serine 1 (CXXS1); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 1 (TAIR:AT3G51030.1); Has 9365 Blast hits to 9347 proteins in 2322 species: Archae - 165; Bacteria - 5071; Metazoa - 947; Fungi - 584; Plants - 1098; Viruses - 0; Other Eukaryotes - 1500 (source: NCBI BLink). & (gnl|cdd|36125 : 104.0) no description available & (gnl|cdd|48496 : 87.2) no description available & (q07090|trxh2_tobac : 83.2) Thioredoxin H-type 2 (TRX-H2) - Nicotiana tabacum (Common tobacco) & (reliability: 288.0) & (original description: Putative CXXS1, Description = Thioredoxin-like protein CXXS1, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf00481_98408-104660' '(at1g08570 : 258.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.; atypical CYS HIS rich thioredoxin 4 (ACHT4); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast membrane, chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 3 (TAIR:AT2G33270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36125 : 107.0) no description available & (reliability: 516.0) & (original description: Putative trx2, Description = Thioredoxin, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf00539_764277-768892' '(at1g76080 : 389.0) Encodes a thioredoxin localized in chloroplast stroma. Known as CDSP32 (CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD).; chloroplastic drought-induced stress protein of 32 kD (CDSP32); INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G19730.1); Has 3263 Blast hits to 3026 proteins in 903 species: Archae - 63; Bacteria - 1344; Metazoa - 643; Fungi - 77; Plants - 661; Viruses - 3; Other Eukaryotes - 472 (source: NCBI BLink). & (gnl|cdd|48534 : 162.0) no description available & (reliability: 778.0) & (original description: Putative CDSP32, Description = Thioredoxin-like protein CDSP32, chloroplastic, PFAM = PF00085;PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf00653_140345-146823' '(at5g16400 : 177.0) Encodes an f-type thioredoxin (Trx-f2) localized in chloroplast stroma.; thioredoxin F2 (TRXF2); FUNCTIONS IN: enzyme activator activity; INVOLVED IN: positive regulation of catalytic activity; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin F-type 1 (TAIR:AT3G02730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p29450|trxf_pea : 173.0) Thioredoxin F-type, chloroplast precursor (TRX-F) - Pisum sativum (Garden pea) & (gnl|cdd|36125 : 111.0) no description available & (gnl|cdd|84504 : 104.0) no description available & (reliability: 354.0) & (original description: Putative trx11, Description = Thioredoxin F-type, chloroplastic, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf00869_715503-717994' '(at5g08410 : 111.0) ferredoxin/thioredoxin reductase subunit A (variable subunit) 2 (FTRA2); FUNCTIONS IN: ferredoxin:thioredoxin reductase activity, catalytic activity, ferredoxin reductase activity; INVOLVED IN: photosynthesis, light reaction, photosynthesis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin thioredoxin reductase, alpha chain (InterPro:IPR004207), Electron transport accessory protein (InterPro:IPR008990); BEST Arabidopsis thaliana protein match is: ferredoxin/thioredoxin reductase subunit A (variable subunit) 1 (TAIR:AT5G23440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p80680|ftrv_maize : 95.1) Ferredoxin-thioredoxin reductase, variable chain (FTR-V) (Ferredoxin-thioredoxin reductase subunit A) (FTR-A) - Zea mays (Maize) & (gnl|cdd|86196 : 89.7) no description available & (reliability: 222.0) & (original description: Putative FTRV, Description = Ferredoxin-thioredoxin reductase, variable chain, PFAM = PF02941)' T '21.1' 'redox.thioredoxin' 'niben101scf01012_486087-489481' '(at5g06430 : 213.0) Thioredoxin superfamily protein; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G37200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative At5g06430, Description = At5g06430, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf01036_372649-379381' '(q9xgs0|trxm_brana : 185.0) Thioredoxin M-type, chloroplast precursor (TRX-M) - Brassica napus (Rape) & (at3g15360 : 183.0) encodes a prokaryotic thioredoxin; thioredoxin M-type 4 (TRX-M4); FUNCTIONS IN: enzyme activator activity; INVOLVED IN: response to oxidative stress, positive regulation of catalytic activity; LOCATED IN: thylakoid, chloroplast thylakoid membrane, cell wall, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin (InterPro:IPR005746), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin M-type 1 (TAIR:AT1G03680.1); Has 22907 Blast hits to 21478 proteins in 3001 species: Archae - 325; Bacteria - 11943; Metazoa - 2959; Fungi - 1292; Plants - 2075; Viruses - 15; Other Eukaryotes - 4298 (source: NCBI BLink). & (gnl|cdd|36128 : 150.0) no description available & (gnl|cdd|84504 : 131.0) no description available & (reliability: 366.0) & (original description: Putative trx, Description = Thioredoxin, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf01294_624643-636236' '(q9xgs0|trxm_brana : 155.0) Thioredoxin M-type, chloroplast precursor (TRX-M) - Brassica napus (Rape) & (at4g03520 : 144.0) chloroplast localized thioredoxin, similar to prokaryotic types.; ATHM2; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766); BEST Arabidopsis thaliana protein match is: thioredoxin M-type 1 (TAIR:AT1G03680.1); Has 9201 Blast hits to 9185 proteins in 2237 species: Archae - 146; Bacteria - 6732; Metazoa - 24; Fungi - 110; Plants - 264; Viruses - 0; Other Eukaryotes - 1925 (source: NCBI BLink). & (gnl|cdd|36128 : 136.0) no description available & (gnl|cdd|84504 : 123.0) no description available & (reliability: 288.0) & (original description: Putative trx, Description = Thioredoxin, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf01677_446126-452636' '(gnl|cdd|35625 : 518.0) no description available & (at2g17420 : 504.0) NADPH-dependent thioredoxin reductase, major cytosolic isoform; NADPH-dependent thioredoxin reductase A (NTRA); FUNCTIONS IN: thioredoxin-disulfide reductase activity; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, mitochondrial matrix; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II, active site (InterPro:IPR008255), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Thioredoxin reductase (InterPro:IPR005982); BEST Arabidopsis thaliana protein match is: NADPH-dependent thioredoxin reductase B (TAIR:AT4G35460.1); Has 20135 Blast hits to 20133 proteins in 2901 species: Archae - 588; Bacteria - 13597; Metazoa - 140; Fungi - 273; Plants - 163; Viruses - 0; Other Eukaryotes - 5374 (source: NCBI BLink). & (gnl|cdd|30838 : 313.0) no description available & (reliability: 1008.0) & (original description: Putative NTR2, Description = Thioredoxin reductase 2, PFAM = PF07992)' T '21.1' 'redox.thioredoxin' 'niben101scf01701_773455-777136' '(p29449|trxh1_tobac : 213.0) Thioredoxin H-type 1 (TRX-H1) - Nicotiana tabacum (Common tobacco) & (at3g51030 : 167.0) encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.; thioredoxin H-type 1 (TRX1); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 5 (TAIR:AT1G45145.1); Has 18017 Blast hits to 17697 proteins in 2965 species: Archae - 232; Bacteria - 9905; Metazoa - 1876; Fungi - 909; Plants - 1960; Viruses - 5; Other Eukaryotes - 3130 (source: NCBI BLink). & (gnl|cdd|36125 : 120.0) no description available & (gnl|cdd|48496 : 111.0) no description available & (reliability: 334.0) & (original description: Putative trh2, Description = Thioredoxin, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf01739_558549-573278' '(at2g35010 : 160.0) thioredoxin O1 (TO1); INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin O2 (TAIR:AT1G31020.1); Has 13800 Blast hits to 13766 proteins in 2821 species: Archae - 178; Bacteria - 7899; Metazoa - 1073; Fungi - 652; Plants - 1267; Viruses - 5; Other Eukaryotes - 2726 (source: NCBI BLink). & (gnl|cdd|36125 : 102.0) no description available & (gnl|cdd|48496 : 96.8) no description available & (reliability: 320.0) & (original description: Putative trx, Description = Thioredoxin O1, mitochondrial, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf02027_34136-38163' '(at5g51010 : 131.0) Rubredoxin-like superfamily protein; FUNCTIONS IN: electron carrier activity, metal ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubredoxin-type Fe(Cys)4 protein (InterPro:IPR004039); BEST Arabidopsis thaliana protein match is: rubredoxin family protein (TAIR:AT5G17170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative At5g51010, Description = Putative uncharacterized protein At5g51010, PFAM = )' T '21.1' 'redox.thioredoxin' 'niben101scf02043_340016-342808' '(at5g39950 : 140.0) encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.; thioredoxin 2 (TRX2); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: N-terminal protein myristoylation, sulfate assimilation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 7 (TAIR:AT1G59730.1); Has 19714 Blast hits to 19583 proteins in 2950 species: Archae - 262; Bacteria - 11021; Metazoa - 1828; Fungi - 880; Plants - 1790; Viruses - 14; Other Eukaryotes - 3919 (source: NCBI BLink). & (gnl|cdd|36125 : 122.0) no description available & (q39362|trxh2_brana : 117.0) Thioredoxin H-type 2 (TRX-H-2) - Brassica napus (Rape) & (gnl|cdd|48496 : 114.0) no description available & (reliability: 280.0) & (original description: Putative TRX2, Description = Thioredoxin H2, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf02043_395947-409262' '(gnl|cdd|36125 : 123.0) no description available & (gnl|cdd|48496 : 116.0) no description available & (at5g39950 : 113.0) encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.; thioredoxin 2 (TRX2); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: N-terminal protein myristoylation, sulfate assimilation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 7 (TAIR:AT1G59730.1); Has 19714 Blast hits to 19583 proteins in 2950 species: Archae - 262; Bacteria - 11021; Metazoa - 1828; Fungi - 880; Plants - 1790; Viruses - 14; Other Eukaryotes - 3919 (source: NCBI BLink). & (q39362|trxh2_brana : 98.6) Thioredoxin H-type 2 (TRX-H-2) - Brassica napus (Rape) & (reliability: 226.0) & (original description: Putative trx3, Description = Thioredoxin 3, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf02235_176734-192852' '(at3g03860 : 198.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.; APR-like 5 (APRL5); INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: APR-like 7 (TAIR:AT5G18120.1); Has 278 Blast hits to 278 proteins in 73 species: Archae - 0; Bacteria - 38; Metazoa - 82; Fungi - 10; Plants - 137; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37851 : 138.0) no description available & (gnl|cdd|48548 : 111.0) no description available & (reliability: 396.0) & (original description: Putative APRL5, Description = 5'-adenylylsulfate reductase-like 5, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf02275_375852-380048' '(at1g08570 : 260.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.; atypical CYS HIS rich thioredoxin 4 (ACHT4); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast membrane, chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 3 (TAIR:AT2G33270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36125 : 107.0) no description available & (reliability: 520.0) & (original description: Putative ACHT4, Description = Atypical CYS HIS rich thioredoxin 4, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf02442_71807-79405' '(gnl|cdd|36522 : 293.0) no description available & (at4g22670 : 238.0) HSP70-interacting protein 1 (HIP1); FUNCTIONS IN: binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetraticopeptide domain-containing thioredoxin (TAIR:AT3G17880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative ST13, Description = Hsc70-interacting protein, PFAM = PF13181)' T '21.1' 'redox.thioredoxin' 'niben101scf02507_295123-300457' '(at3g15360 : 185.0) encodes a prokaryotic thioredoxin; thioredoxin M-type 4 (TRX-M4); FUNCTIONS IN: enzyme activator activity; INVOLVED IN: response to oxidative stress, positive regulation of catalytic activity; LOCATED IN: thylakoid, chloroplast thylakoid membrane, cell wall, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin (InterPro:IPR005746), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin M-type 1 (TAIR:AT1G03680.1); Has 22907 Blast hits to 21478 proteins in 3001 species: Archae - 325; Bacteria - 11943; Metazoa - 2959; Fungi - 1292; Plants - 2075; Viruses - 15; Other Eukaryotes - 4298 (source: NCBI BLink). & (q9xgs0|trxm_brana : 175.0) Thioredoxin M-type, chloroplast precursor (TRX-M) - Brassica napus (Rape) & (gnl|cdd|36128 : 145.0) no description available & (gnl|cdd|84504 : 131.0) no description available & (reliability: 370.0) & (original description: Putative trx, Description = Thioredoxin, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf02537_1377278-1382677' '(at1g34780 : 304.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.; APR-like 4 (APRL4); LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: APR-like 6 (TAIR:AT4G08930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37851 : 196.0) no description available & (gnl|cdd|48548 : 146.0) no description available & (reliability: 608.0) & (original description: Putative APRL4, Description = 5'-adenylylsulfate reductase-like 4, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf02569_232385-240205' '(at2g18990 : 164.0) thioredoxin domain-containing protein 9 homolog (TXND9); INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G25580.1); Has 1035 Blast hits to 1035 proteins in 264 species: Archae - 10; Bacteria - 75; Metazoa - 396; Fungi - 154; Plants - 221; Viruses - 0; Other Eukaryotes - 179 (source: NCBI BLink). & (gnl|cdd|36885 : 163.0) no description available & (gnl|cdd|48538 : 112.0) no description available & (reliability: 324.0) & (original description: Putative At2g18990, Description = Thioredoxin domain-containing protein 9 homolog, PFAM = )' T '21.1' 'redox.thioredoxin' 'niben101scf02581_44824-49141' '(at5g51010 : 157.0) Rubredoxin-like superfamily protein; FUNCTIONS IN: electron carrier activity, metal ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubredoxin-type Fe(Cys)4 protein (InterPro:IPR004039); BEST Arabidopsis thaliana protein match is: rubredoxin family protein (TAIR:AT5G17170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative At5g51010, Description = Putative uncharacterized protein At5g51010, PFAM = )' T '21.1' 'redox.thioredoxin' 'niben101scf02602_2955-7401' '(at3g15360 : 185.0) encodes a prokaryotic thioredoxin; thioredoxin M-type 4 (TRX-M4); FUNCTIONS IN: enzyme activator activity; INVOLVED IN: response to oxidative stress, positive regulation of catalytic activity; LOCATED IN: thylakoid, chloroplast thylakoid membrane, cell wall, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin (InterPro:IPR005746), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin M-type 1 (TAIR:AT1G03680.1); Has 22907 Blast hits to 21478 proteins in 3001 species: Archae - 325; Bacteria - 11943; Metazoa - 2959; Fungi - 1292; Plants - 2075; Viruses - 15; Other Eukaryotes - 4298 (source: NCBI BLink). & (q9xgs0|trxm_brana : 183.0) Thioredoxin M-type, chloroplast precursor (TRX-M) - Brassica napus (Rape) & (gnl|cdd|36128 : 148.0) no description available & (gnl|cdd|84504 : 133.0) no description available & (reliability: 370.0) & (original description: Putative trxA, Description = Thioredoxin, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf02631_165393-177464' '(at2g15570 : 157.0) chloroplast protein similar to prokaryotic thioredoxin.; ATHM3; FUNCTIONS IN: enzyme activator activity; INVOLVED IN: positive regulation of catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin M-type 4 (TAIR:AT3G15360.1); Has 16998 Blast hits to 16795 proteins in 2911 species: Archae - 264; Bacteria - 9868; Metazoa - 1437; Fungi - 798; Plants - 1429; Viruses - 4; Other Eukaryotes - 3198 (source: NCBI BLink). & (gnl|cdd|36128 : 138.0) no description available & (p48384|trxm_pea : 115.0) Thioredoxin M-type, chloroplast precursor (TRX-M) - Pisum sativum (Garden pea) & (gnl|cdd|84504 : 106.0) no description available & (reliability: 314.0) & (original description: Putative Trx10, Description = Mitochondrial thioredoxin M-type 10, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf02806_2749-5327' '(gnl|cdd|36125 : 104.0) no description available & (gnl|cdd|48496 : 97.6) no description available & (at5g39950 : 92.8) encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.; thioredoxin 2 (TRX2); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: N-terminal protein myristoylation, sulfate assimilation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 7 (TAIR:AT1G59730.1); Has 19714 Blast hits to 19583 proteins in 2950 species: Archae - 262; Bacteria - 11021; Metazoa - 1828; Fungi - 880; Plants - 1790; Viruses - 14; Other Eukaryotes - 3919 (source: NCBI BLink). & (reliability: 185.6) & (original description: Putative trx3, Description = Thioredoxin, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf02927_440753-444497' '(at5g06690 : 214.0) Encodes a thioredoxin (WCRKC1) localized in chloroplast stroma. Contains a WCRKC motif.; WCRKC thioredoxin 1 (WCRKC1); INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: WCRKC thioredoxin 2 (TAIR:AT5G04260.1); Has 1600 Blast hits to 1600 proteins in 488 species: Archae - 10; Bacteria - 949; Metazoa - 23; Fungi - 13; Plants - 132; Viruses - 4; Other Eukaryotes - 469 (source: NCBI BLink). & (gnl|cdd|36125 : 91.5) no description available & (reliability: 428.0) & (original description: Putative WCRKC1, Description = Thioredoxin-like 3-1, chloroplastic, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf03044_9196-22791' '(at3g20560 : 694.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin).; PDI-like 5-3 (PDIL5-3); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336), Protein of unknown function DUF1692 (InterPro:IPR012936); BEST Arabidopsis thaliana protein match is: Thioredoxin protein with domain of unknown function (DUF1692) (TAIR:AT1G50950.1); Has 5147 Blast hits to 3670 proteins in 375 species: Archae - 8; Bacteria - 112; Metazoa - 2494; Fungi - 904; Plants - 886; Viruses - 3; Other Eukaryotes - 740 (source: NCBI BLink). & (gnl|cdd|87414 : 191.0) no description available & (gnl|cdd|37878 : 176.0) no description available & (reliability: 1288.0) & (original description: Putative PDI5, Description = Protein disulfide-isomerase 5-4, PFAM = PF00085;PF13850;PF07970)' T '21.1' 'redox.thioredoxin' 'niben101scf03345_61897-84316' '(at3g17880 : 373.0) Encodes a thioredoxin-like disulfide reductase. The protein interacts with the yeast Hsp70 protein Ssb2 in vitro. This interaction is sensitive to the redox status of the thioredoxin domain of AtTDX.; tetraticopeptide domain-containing thioredoxin (TDX); FUNCTIONS IN: protein binding, oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Tetratricopeptide repeat-containing (InterPro:IPR013026), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: HSP70-interacting protein 1 (TAIR:AT4G22670.1); Has 25327 Blast hits to 23050 proteins in 2977 species: Archae - 386; Bacteria - 12482; Metazoa - 3860; Fungi - 1433; Plants - 2443; Viruses - 7; Other Eukaryotes - 4716 (source: NCBI BLink). & (gnl|cdd|36522 : 210.0) no description available & (q42443|trxh_orysa : 118.0) Thioredoxin H-type (TRX-H) (Phloem sap 13 kDa protein 1) - Oryza sativa (Rice) & (gnl|cdd|48496 : 107.0) no description available & (reliability: 746.0) & (original description: Putative TDX, Description = TPR repeat-containing thioredoxin TDX, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf03439_24341-30089' '(at1g53300 : 678.0) tetratricopetide-repeat thioredoxin-like 1 (TTL1); FUNCTIONS IN: binding; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide TPR-1 (InterPro:IPR001440), Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: tetratricopetide-repeat thioredoxin-like 2 (TAIR:AT3G14950.1); Has 32097 Blast hits to 15852 proteins in 1300 species: Archae - 552; Bacteria - 6287; Metazoa - 8110; Fungi - 3609; Plants - 2668; Viruses - 128; Other Eukaryotes - 10743 (source: NCBI BLink). & (gnl|cdd|35770 : 136.0) no description available & (gnl|cdd|29151 : 85.5) no description available & (reliability: 1356.0) & (original description: Putative TTL3, Description = Inactive TPR repeat-containing thioredoxin TTL3, PFAM = PF00515;PF13414;PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf03535_99874-105531' '(at3g53220 : 155.0) Thioredoxin superfamily protein; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin 2 (TAIR:AT5G39950.1); Has 8343 Blast hits to 8341 proteins in 2235 species: Archae - 86; Bacteria - 4305; Metazoa - 749; Fungi - 428; Plants - 986; Viruses - 2; Other Eukaryotes - 1787 (source: NCBI BLink). & (gnl|cdd|36125 : 85.3) no description available & (gnl|cdd|48496 : 80.3) no description available & (reliability: 310.0) & (original description: Putative Os04g0560200, Description = Thioredoxin-like 3-3, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf03705_454852-468266' '(at1g31020 : 152.0) thioredoxin O2 (TO2); INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin O1 (TAIR:AT2G35010.2); Has 12673 Blast hits to 12649 proteins in 2832 species: Archae - 166; Bacteria - 7079; Metazoa - 1001; Fungi - 576; Plants - 1203; Viruses - 3; Other Eukaryotes - 2645 (source: NCBI BLink). & (gnl|cdd|36125 : 100.0) no description available & (gnl|cdd|48496 : 94.9) no description available & (reliability: 304.0) & (original description: Putative trx, Description = Thioredoxin O1, mitochondrial, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf03778_198475-202619' '(at4g29670 : 214.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.; atypical CYS HIS rich thioredoxin 2 (ACHT2); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 1 (TAIR:AT4G26160.1); Has 5219 Blast hits to 5209 proteins in 1205 species: Archae - 70; Bacteria - 1917; Metazoa - 873; Fungi - 538; Plants - 961; Viruses - 3; Other Eukaryotes - 857 (source: NCBI BLink). & (gnl|cdd|36125 : 113.0) no description available & (reliability: 428.0) & (original description: Putative trx2, Description = Thioredoxin, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf03954_134672-138946' '(at1g76760 : 161.0) Encodes a y-type thioredoxin (Trx-y1) localized in chloroplast stroma.; thioredoxin Y1 (TY1); FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: glycerol ether metabolic process, cell redox homeostasis; LOCATED IN: chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin (InterPro:IPR005746), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin Y2 (TAIR:AT1G43560.1); Has 23491 Blast hits to 21806 proteins in 3039 species: Archae - 310; Bacteria - 12245; Metazoa - 3466; Fungi - 1226; Plants - 1976; Viruses - 18; Other Eukaryotes - 4250 (source: NCBI BLink). & (gnl|cdd|36128 : 128.0) no description available & (gnl|cdd|84504 : 111.0) no description available & (p23400|trxm_chlre : 83.6) Thioredoxin M-type, chloroplast precursor (TRX-M) (Thioredoxin CH2) - Chlamydomonas reinhardtii & (reliability: 322.0) & (original description: Putative trx, Description = Thioredoxin, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf04036_83722-89710' '(at1g53300 : 653.0) tetratricopetide-repeat thioredoxin-like 1 (TTL1); FUNCTIONS IN: binding; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide TPR-1 (InterPro:IPR001440), Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: tetratricopetide-repeat thioredoxin-like 2 (TAIR:AT3G14950.1); Has 32097 Blast hits to 15852 proteins in 1300 species: Archae - 552; Bacteria - 6287; Metazoa - 8110; Fungi - 3609; Plants - 2668; Viruses - 128; Other Eukaryotes - 10743 (source: NCBI BLink). & (gnl|cdd|35770 : 127.0) no description available & (gnl|cdd|48496 : 89.5) no description available & (reliability: 1306.0) & (original description: Putative TTL1, Description = TPR repeat-containing thioredoxin TTL1, PFAM = PF00515;PF14559;PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf04123_218761-226858' '(at3g08710 : 204.0) Associated to plasma membrane. Moves cell to cell, suggesting a role in intercellular communication.; thioredoxin H-type 9 (TH9); INVOLVED IN: cell communication; LOCATED IN: cytosol, nucleus, plasma membrane, plastid; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G56420.1); Has 16223 Blast hits to 16135 proteins in 2903 species: Archae - 224; Bacteria - 9339; Metazoa - 1540; Fungi - 676; Plants - 1413; Viruses - 3; Other Eukaryotes - 3028 (source: NCBI BLink). & (gnl|cdd|36125 : 128.0) no description available & (q42443|trxh_orysa : 107.0) Thioredoxin H-type (TRX-H) (Phloem sap 13 kDa protein 1) - Oryza sativa (Rice) & (gnl|cdd|48496 : 99.1) no description available & (reliability: 408.0) & (original description: Putative TRX9, Description = Thioredoxin H9, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf04375_804486-809925' '(at5g16400 : 180.0) Encodes an f-type thioredoxin (Trx-f2) localized in chloroplast stroma.; thioredoxin F2 (TRXF2); FUNCTIONS IN: enzyme activator activity; INVOLVED IN: positive regulation of catalytic activity; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin F-type 1 (TAIR:AT3G02730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p29450|trxf_pea : 176.0) Thioredoxin F-type, chloroplast precursor (TRX-F) - Pisum sativum (Garden pea) & (gnl|cdd|36125 : 110.0) no description available & (gnl|cdd|84504 : 104.0) no description available & (reliability: 360.0) & (original description: Putative trx11, Description = Thioredoxin F-type, chloroplastic, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf04551_496468-504879' '(q43636|trxh_ricco : 199.0) Thioredoxin H-type (TRX-H) - Ricinus communis (Castor bean) & (at3g51030 : 182.0) encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.; thioredoxin H-type 1 (TRX1); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 5 (TAIR:AT1G45145.1); Has 18017 Blast hits to 17697 proteins in 2965 species: Archae - 232; Bacteria - 9905; Metazoa - 1876; Fungi - 909; Plants - 1960; Viruses - 5; Other Eukaryotes - 3130 (source: NCBI BLink). & (gnl|cdd|36125 : 128.0) no description available & (gnl|cdd|84504 : 111.0) no description available & (reliability: 364.0) & (original description: Putative trh2, Description = Thioredoxin, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf04765_3314-9337' '(at4g04950 : 662.0) thioredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336), Glutaredoxin-related protein (InterPro:IPR004480); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G32580.1); Has 26535 Blast hits to 17137 proteins in 2757 species: Archae - 249; Bacteria - 14010; Metazoa - 1647; Fungi - 1426; Plants - 1759; Viruses - 3; Other Eukaryotes - 7441 (source: NCBI BLink). & (gnl|cdd|36129 : 248.0) no description available & (gnl|cdd|48577 : 162.0) no description available & (reliability: 1324.0) & (original description: Putative GRXS17, Description = Monothiol glutaredoxin-S17, PFAM = PF00085;PF00462;PF00462;PF00462)' T '21.1' 'redox.thioredoxin' 'niben101scf04793_149415-153635' '(at5g06690 : 213.0) Encodes a thioredoxin (WCRKC1) localized in chloroplast stroma. Contains a WCRKC motif.; WCRKC thioredoxin 1 (WCRKC1); INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: WCRKC thioredoxin 2 (TAIR:AT5G04260.1); Has 1600 Blast hits to 1600 proteins in 488 species: Archae - 10; Bacteria - 949; Metazoa - 23; Fungi - 13; Plants - 132; Viruses - 4; Other Eukaryotes - 469 (source: NCBI BLink). & (gnl|cdd|36125 : 93.8) no description available & (reliability: 426.0) & (original description: Putative WCRKC1, Description = Thioredoxin-like 3-1, chloroplastic, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf04899_28388-34445' '(at4g04950 : 676.0) thioredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336), Glutaredoxin-related protein (InterPro:IPR004480); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G32580.1); Has 26535 Blast hits to 17137 proteins in 2757 species: Archae - 249; Bacteria - 14010; Metazoa - 1647; Fungi - 1426; Plants - 1759; Viruses - 3; Other Eukaryotes - 7441 (source: NCBI BLink). & (gnl|cdd|36129 : 252.0) no description available & (gnl|cdd|48577 : 161.0) no description available & (reliability: 1352.0) & (original description: Putative GRS11, Description = Monothiol glutaredoxin-S11, PFAM = PF00462;PF00462;PF00462;PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf04903_197887-205474' '(at3g08710 : 127.0) Associated to plasma membrane. Moves cell to cell, suggesting a role in intercellular communication.; thioredoxin H-type 9 (TH9); INVOLVED IN: cell communication; LOCATED IN: cytosol, nucleus, plasma membrane, plastid; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G56420.1); Has 16223 Blast hits to 16135 proteins in 2903 species: Archae - 224; Bacteria - 9339; Metazoa - 1540; Fungi - 676; Plants - 1413; Viruses - 3; Other Eukaryotes - 3028 (source: NCBI BLink). & (gnl|cdd|36125 : 114.0) no description available & (q07090|trxh2_tobac : 93.6) Thioredoxin H-type 2 (TRX-H2) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|48496 : 90.7) no description available & (reliability: 254.0) & (original description: Putative ATH9, Description = Thioredoxin H-type, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf05174_262876-265870' '(at1g07700 : 213.0) Thioredoxin superfamily protein; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G19730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative BnaA03g46730D, Description = BnaA03g46730D protein, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf05764_534313-537878' '(q07090|trxh2_tobac : 214.0) Thioredoxin H-type 2 (TRX-H2) - Nicotiana tabacum (Common tobacco) & (at3g51030 : 179.0) encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.; thioredoxin H-type 1 (TRX1); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 5 (TAIR:AT1G45145.1); Has 18017 Blast hits to 17697 proteins in 2965 species: Archae - 232; Bacteria - 9905; Metazoa - 1876; Fungi - 909; Plants - 1960; Viruses - 5; Other Eukaryotes - 3130 (source: NCBI BLink). & (gnl|cdd|36125 : 125.0) no description available & (gnl|cdd|84504 : 111.0) no description available & (reliability: 358.0) & (original description: Putative trh2, Description = Thioredoxin, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf06113_68611-73934' '(at1g11530 : 146.0) Encodes a monocysteinic thioredoxin, thioredoxin in which the second cysteine of the redox site is replaced by a serine, with low disulfide reductase but efficient disulfide isomerase activity.; C-terminal cysteine residue is changed to a serine 1 (CXXS1); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 1 (TAIR:AT3G51030.1); Has 9365 Blast hits to 9347 proteins in 2322 species: Archae - 165; Bacteria - 5071; Metazoa - 947; Fungi - 584; Plants - 1098; Viruses - 0; Other Eukaryotes - 1500 (source: NCBI BLink). & (gnl|cdd|36125 : 106.0) no description available & (gnl|cdd|48496 : 90.3) no description available & (q07090|trxh2_tobac : 82.8) Thioredoxin H-type 2 (TRX-H2) - Nicotiana tabacum (Common tobacco) & (reliability: 292.0) & (original description: Putative CXXS1, Description = Thioredoxin-like protein CXXS1, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf06280_567894-574001' '(at2g04700 : 216.0) ferredoxin thioredoxin reductase catalytic beta chain family protein; FUNCTIONS IN: ferredoxin:thioredoxin reductase activity, ferredoxin reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin thioredoxin reductase, beta subunit (InterPro:IPR004209); Has 267 Blast hits to 267 proteins in 113 species: Archae - 18; Bacteria - 139; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (o49856|ftrc_soybn : 206.0) Ferredoxin-thioredoxin reductase catalytic chain, chloroplast precursor (EC 1.18.-.-) (FTR-C) - Glycine max (Soybean) & (gnl|cdd|66604 : 183.0) no description available & (reliability: 432.0) & (original description: Putative FTRC, Description = Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic, PFAM = PF02943)' T '21.1' 'redox.thioredoxin' 'niben101scf06565_330097-335364' '(at3g08710 : 126.0) Associated to plasma membrane. Moves cell to cell, suggesting a role in intercellular communication.; thioredoxin H-type 9 (TH9); INVOLVED IN: cell communication; LOCATED IN: cytosol, nucleus, plasma membrane, plastid; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G56420.1); Has 16223 Blast hits to 16135 proteins in 2903 species: Archae - 224; Bacteria - 9339; Metazoa - 1540; Fungi - 676; Plants - 1413; Viruses - 3; Other Eukaryotes - 3028 (source: NCBI BLink). & (gnl|cdd|36125 : 120.0) no description available & (q07090|trxh2_tobac : 97.8) Thioredoxin H-type 2 (TRX-H2) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|48496 : 95.7) no description available & (reliability: 252.0) & (original description: Putative ATH9, Description = Thioredoxin H-type, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf06727_75161-87653' '(at2g41680 : 777.0) Encodes a NADPH thioredoxin reductase involved in chloroplast protection against oxidative damage.; NADPH-dependent thioredoxin reductase C (NTRC); FUNCTIONS IN: thioredoxin-disulfide reductase activity; INVOLVED IN: hydrogen peroxide catabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Thioredoxin fold (InterPro:IPR012335), Thioredoxin reductase (InterPro:IPR005982), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Pyridine nucleotide-disulphide oxidoreductase, class-II, active site (InterPro:IPR008255), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: NADPH-dependent thioredoxin reductase A (TAIR:AT2G17420.1); Has 36111 Blast hits to 36072 proteins in 3191 species: Archae - 926; Bacteria - 24476; Metazoa - 1051; Fungi - 742; Plants - 985; Viruses - 7; Other Eukaryotes - 7924 (source: NCBI BLink). & (gnl|cdd|35625 : 471.0) no description available & (gnl|cdd|30838 : 322.0) no description available & (reliability: 1554.0) & (original description: Putative trxB, Description = Thioredoxin reductase, PFAM = PF07992;PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf06738_74384-84410' '(at2g41680 : 784.0) Encodes a NADPH thioredoxin reductase involved in chloroplast protection against oxidative damage.; NADPH-dependent thioredoxin reductase C (NTRC); FUNCTIONS IN: thioredoxin-disulfide reductase activity; INVOLVED IN: hydrogen peroxide catabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Thioredoxin fold (InterPro:IPR012335), Thioredoxin reductase (InterPro:IPR005982), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Pyridine nucleotide-disulphide oxidoreductase, class-II, active site (InterPro:IPR008255), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: NADPH-dependent thioredoxin reductase A (TAIR:AT2G17420.1); Has 36111 Blast hits to 36072 proteins in 3191 species: Archae - 926; Bacteria - 24476; Metazoa - 1051; Fungi - 742; Plants - 985; Viruses - 7; Other Eukaryotes - 7924 (source: NCBI BLink). & (gnl|cdd|35625 : 472.0) no description available & (gnl|cdd|30838 : 325.0) no description available & (reliability: 1568.0) & (original description: Putative NTRC, Description = NADPH-dependent thioredoxin reductase 3, PFAM = PF07992;PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf06958_164713-167360' '(gnl|cdd|36125 : 125.0) no description available & (at5g39950 : 119.0) encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.; thioredoxin 2 (TRX2); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: N-terminal protein myristoylation, sulfate assimilation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 7 (TAIR:AT1G59730.1); Has 19714 Blast hits to 19583 proteins in 2950 species: Archae - 262; Bacteria - 11021; Metazoa - 1828; Fungi - 880; Plants - 1790; Viruses - 14; Other Eukaryotes - 3919 (source: NCBI BLink). & (gnl|cdd|48496 : 116.0) no description available & (q39362|trxh2_brana : 98.6) Thioredoxin H-type 2 (TRX-H-2) - Brassica napus (Rape) & (reliability: 238.0) & (original description: Putative TRX2, Description = Thioredoxin H2, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf07006_22701-27236' '(at3g06730 : 212.0) Encodes a plastidial thioredoxin (TRX) isoform that defines a branch of plastidial TRXs lying between x- and y-type TRXs and thus was named TRX z. Possesses disulfide reductase activity in vitro. TRX z was previously named as Trx p (thioredoxin putative and plastidic) before its thioredoxin activity was confirmed (Meng et al., PNAS 2010, 107:3900). Knockout mutant of TRX z has a severe albino phenotype and is inhibited in chloroplast development. Two fructokinase-like proteins (FLN1 and FLN2), members of the pfkB-carbohydrate kinase family, are potential TRX z targets.; Thioredoxin z (TRX z); FUNCTIONS IN: protein-disulfide reductase activity, protein disulfide oxidoreductase activity; INVOLVED IN: plastid organization, cell redox homeostasis; LOCATED IN: thylakoid, chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin Y2 (TAIR:AT1G43560.1); Has 15064 Blast hits to 14650 proteins in 2900 species: Archae - 204; Bacteria - 8491; Metazoa - 1613; Fungi - 754; Plants - 1355; Viruses - 0; Other Eukaryotes - 2647 (source: NCBI BLink). & (gnl|cdd|36125 : 83.0) no description available & (gnl|cdd|84504 : 80.6) no description available & (reliability: 424.0) & (original description: Putative CITRX2, Description = Thioredoxin-like protein CITRX2, chloroplastic, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf07229_79807-124713' '(at4g29670 : 249.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.; atypical CYS HIS rich thioredoxin 2 (ACHT2); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 1 (TAIR:AT4G26160.1); Has 5219 Blast hits to 5209 proteins in 1205 species: Archae - 70; Bacteria - 1917; Metazoa - 873; Fungi - 538; Plants - 961; Viruses - 3; Other Eukaryotes - 857 (source: NCBI BLink). & (gnl|cdd|36125 : 111.0) no description available & (reliability: 498.0) & (original description: Putative trx2, Description = Thioredoxin-like 2, chloroplastic, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf07610_13147-16339' '(at1g08570 : 245.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.; atypical CYS HIS rich thioredoxin 4 (ACHT4); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast membrane, chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 3 (TAIR:AT2G33270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36125 : 110.0) no description available & (reliability: 490.0) & (original description: Putative trx2, Description = Thioredoxin 2, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf07619_6928-12744' '(at3g08710 : 200.0) Associated to plasma membrane. Moves cell to cell, suggesting a role in intercellular communication.; thioredoxin H-type 9 (TH9); INVOLVED IN: cell communication; LOCATED IN: cytosol, nucleus, plasma membrane, plastid; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G56420.1); Has 16223 Blast hits to 16135 proteins in 2903 species: Archae - 224; Bacteria - 9339; Metazoa - 1540; Fungi - 676; Plants - 1413; Viruses - 3; Other Eukaryotes - 3028 (source: NCBI BLink). & (gnl|cdd|36125 : 125.0) no description available & (q42443|trxh_orysa : 107.0) Thioredoxin H-type (TRX-H) (Phloem sap 13 kDa protein 1) - Oryza sativa (Rice) & (gnl|cdd|48496 : 97.2) no description available & (reliability: 400.0) & (original description: Putative TRX9, Description = Thioredoxin H9, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf08191_248120-253977' '(at1g53300 : 622.0) tetratricopetide-repeat thioredoxin-like 1 (TTL1); FUNCTIONS IN: binding; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide TPR-1 (InterPro:IPR001440), Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: tetratricopetide-repeat thioredoxin-like 2 (TAIR:AT3G14950.1); Has 32097 Blast hits to 15852 proteins in 1300 species: Archae - 552; Bacteria - 6287; Metazoa - 8110; Fungi - 3609; Plants - 2668; Viruses - 128; Other Eukaryotes - 10743 (source: NCBI BLink). & (gnl|cdd|35770 : 138.0) no description available & (gnl|cdd|48496 : 85.7) no description available & (reliability: 1244.0) & (original description: Putative TTL4, Description = TPR repeat-containing thioredoxin TTL4, PFAM = PF13414;PF00085;PF00515)' T '21.1' 'redox.thioredoxin' 'niben101scf08580_5678-11520' '(at5g66410 : 259.0) Encodes a protein that functions in microtubule assembly. Plants with reduced levels of both PLP3a (At3g50960) and PLP3b show defects in cytokinesis, cortical microtubule array formation, oriented cell growth, and maintenance of proper ploidy.; phosducin-like protein 3 homolog (PLP3b); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: phosducin-like protein 3 homolog (TAIR:AT3G50960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36885 : 235.0) no description available & (gnl|cdd|48538 : 170.0) no description available & (reliability: 518.0) & (original description: Putative phlp3, Description = Phosducin-like protein 3, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf09028_106511-116212' '(at3g17880 : 369.0) Encodes a thioredoxin-like disulfide reductase. The protein interacts with the yeast Hsp70 protein Ssb2 in vitro. This interaction is sensitive to the redox status of the thioredoxin domain of AtTDX.; tetraticopeptide domain-containing thioredoxin (TDX); FUNCTIONS IN: protein binding, oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Tetratricopeptide repeat-containing (InterPro:IPR013026), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: HSP70-interacting protein 1 (TAIR:AT4G22670.1); Has 25327 Blast hits to 23050 proteins in 2977 species: Archae - 386; Bacteria - 12482; Metazoa - 3860; Fungi - 1433; Plants - 2443; Viruses - 7; Other Eukaryotes - 4716 (source: NCBI BLink). & (gnl|cdd|36522 : 226.0) no description available & (q42443|trxh_orysa : 115.0) Thioredoxin H-type (TRX-H) (Phloem sap 13 kDa protein 1) - Oryza sativa (Rice) & (gnl|cdd|48496 : 104.0) no description available & (reliability: 738.0) & (original description: Putative TDX, Description = TPR repeat-containing thioredoxin TDX, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf09321_318139-323142' '(at4g29670 : 215.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.; atypical CYS HIS rich thioredoxin 2 (ACHT2); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 1 (TAIR:AT4G26160.1); Has 5219 Blast hits to 5209 proteins in 1205 species: Archae - 70; Bacteria - 1917; Metazoa - 873; Fungi - 538; Plants - 961; Viruses - 3; Other Eukaryotes - 857 (source: NCBI BLink). & (gnl|cdd|36125 : 113.0) no description available & (gnl|cdd|48496 : 82.2) no description available & (reliability: 430.0) & (original description: Putative trx2, Description = Thioredoxin, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf09686_11661-18057' '(gnl|cdd|35625 : 520.0) no description available & (at2g17420 : 501.0) NADPH-dependent thioredoxin reductase, major cytosolic isoform; NADPH-dependent thioredoxin reductase A (NTRA); FUNCTIONS IN: thioredoxin-disulfide reductase activity; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, mitochondrial matrix; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II, active site (InterPro:IPR008255), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Thioredoxin reductase (InterPro:IPR005982); BEST Arabidopsis thaliana protein match is: NADPH-dependent thioredoxin reductase B (TAIR:AT4G35460.1); Has 20135 Blast hits to 20133 proteins in 2901 species: Archae - 588; Bacteria - 13597; Metazoa - 140; Fungi - 273; Plants - 163; Viruses - 0; Other Eukaryotes - 5374 (source: NCBI BLink). & (gnl|cdd|30838 : 321.0) no description available & (reliability: 1002.0) & (original description: Putative trxB, Description = Thioredoxin reductase, PFAM = PF07992)' T '21.1' 'redox.thioredoxin' 'niben101scf10309_231826-237685' '(at1g50320 : 170.0) encodes a prokaryotic thioredoxin; thioredoxin X (THX); FUNCTIONS IN: enzyme activator activity; INVOLVED IN: positive regulation of catalytic activity; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin Y1 (TAIR:AT1G76760.1); Has 20779 Blast hits to 19654 proteins in 2968 species: Archae - 276; Bacteria - 11383; Metazoa - 2412; Fungi - 1075; Plants - 1697; Viruses - 7; Other Eukaryotes - 3929 (source: NCBI BLink). & (gnl|cdd|84504 : 114.0) no description available & (gnl|cdd|36128 : 103.0) no description available & (p23400|trxm_chlre : 85.5) Thioredoxin M-type, chloroplast precursor (TRX-M) (Thioredoxin CH2) - Chlamydomonas reinhardtii & (reliability: 340.0) & (original description: Putative trxB, Description = Thioredoxin, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf10490_78395-82085' '(p29449|trxh1_tobac : 216.0) Thioredoxin H-type 1 (TRX-H1) - Nicotiana tabacum (Common tobacco) & (at3g51030 : 166.0) encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.; thioredoxin H-type 1 (TRX1); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 5 (TAIR:AT1G45145.1); Has 18017 Blast hits to 17697 proteins in 2965 species: Archae - 232; Bacteria - 9905; Metazoa - 1876; Fungi - 909; Plants - 1960; Viruses - 5; Other Eukaryotes - 3130 (source: NCBI BLink). & (gnl|cdd|36125 : 120.0) no description available & (gnl|cdd|48496 : 112.0) no description available & (reliability: 332.0) & (original description: Putative trh2, Description = Thioredoxin, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf13103_226779-232096' '(at5g66410 : 288.0) Encodes a protein that functions in microtubule assembly. Plants with reduced levels of both PLP3a (At3g50960) and PLP3b show defects in cytokinesis, cortical microtubule array formation, oriented cell growth, and maintenance of proper ploidy.; phosducin-like protein 3 homolog (PLP3b); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: phosducin-like protein 3 homolog (TAIR:AT3G50960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36885 : 235.0) no description available & (gnl|cdd|48538 : 172.0) no description available & (reliability: 576.0) & (original description: Putative PLP3A, Description = Thioredoxin domain-containing protein PLP3A, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf13180_86083-93443' '(gnl|cdd|35625 : 521.0) no description available & (at2g17420 : 502.0) NADPH-dependent thioredoxin reductase, major cytosolic isoform; NADPH-dependent thioredoxin reductase A (NTRA); FUNCTIONS IN: thioredoxin-disulfide reductase activity; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, mitochondrial matrix; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II, active site (InterPro:IPR008255), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Thioredoxin reductase (InterPro:IPR005982); BEST Arabidopsis thaliana protein match is: NADPH-dependent thioredoxin reductase B (TAIR:AT4G35460.1); Has 20135 Blast hits to 20133 proteins in 2901 species: Archae - 588; Bacteria - 13597; Metazoa - 140; Fungi - 273; Plants - 163; Viruses - 0; Other Eukaryotes - 5374 (source: NCBI BLink). & (gnl|cdd|30838 : 321.0) no description available & (reliability: 1004.0) & (original description: Putative NTR2, Description = Thioredoxin reductase 2, PFAM = PF07992)' T '21.1' 'redox.thioredoxin' 'niben101scf15049_98579-103461' '(at3g06730 : 214.0) Encodes a plastidial thioredoxin (TRX) isoform that defines a branch of plastidial TRXs lying between x- and y-type TRXs and thus was named TRX z. Possesses disulfide reductase activity in vitro. TRX z was previously named as Trx p (thioredoxin putative and plastidic) before its thioredoxin activity was confirmed (Meng et al., PNAS 2010, 107:3900). Knockout mutant of TRX z has a severe albino phenotype and is inhibited in chloroplast development. Two fructokinase-like proteins (FLN1 and FLN2), members of the pfkB-carbohydrate kinase family, are potential TRX z targets.; Thioredoxin z (TRX z); FUNCTIONS IN: protein-disulfide reductase activity, protein disulfide oxidoreductase activity; INVOLVED IN: plastid organization, cell redox homeostasis; LOCATED IN: thylakoid, chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin Y2 (TAIR:AT1G43560.1); Has 15064 Blast hits to 14650 proteins in 2900 species: Archae - 204; Bacteria - 8491; Metazoa - 1613; Fungi - 754; Plants - 1355; Viruses - 0; Other Eukaryotes - 2647 (source: NCBI BLink). & (gnl|cdd|36125 : 83.8) no description available & (gnl|cdd|84504 : 80.2) no description available & (reliability: 428.0) & (original description: Putative CITRX2, Description = Thioredoxin-like protein CITRX2, chloroplastic, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf25265_11312-13968' '(at5g39950 : 166.0) encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.; thioredoxin 2 (TRX2); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: N-terminal protein myristoylation, sulfate assimilation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 7 (TAIR:AT1G59730.1); Has 19714 Blast hits to 19583 proteins in 2950 species: Archae - 262; Bacteria - 11021; Metazoa - 1828; Fungi - 880; Plants - 1790; Viruses - 14; Other Eukaryotes - 3919 (source: NCBI BLink). & (gnl|cdd|36125 : 132.0) no description available & (gnl|cdd|48496 : 118.0) no description available & (q39362|trxh2_brana : 116.0) Thioredoxin H-type 2 (TRX-H-2) - Brassica napus (Rape) & (reliability: 332.0) & (original description: Putative trx3, Description = Thioredoxin 3, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf25430_86606-92271' '(at1g53300 : 617.0) tetratricopetide-repeat thioredoxin-like 1 (TTL1); FUNCTIONS IN: binding; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide TPR-1 (InterPro:IPR001440), Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: tetratricopetide-repeat thioredoxin-like 2 (TAIR:AT3G14950.1); Has 32097 Blast hits to 15852 proteins in 1300 species: Archae - 552; Bacteria - 6287; Metazoa - 8110; Fungi - 3609; Plants - 2668; Viruses - 128; Other Eukaryotes - 10743 (source: NCBI BLink). & (gnl|cdd|35770 : 144.0) no description available & (gnl|cdd|48496 : 85.3) no description available & (reliability: 1234.0) & (original description: Putative BnaA03g56720D, Description = BnaA03g56720D protein, PFAM = PF13414;PF00085;PF00515)' T '21.1' 'redox.thioredoxin' 'niben101scf33433_42092-50364' '(at5g04260 : 179.0) Encodes a thioredoxin (WCRKC2) localized in chloroplast stroma. Contains a WCRKC motif.; WCRKC thioredoxin 2 (WCRKC2); INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: WCRKC thioredoxin 1 (TAIR:AT5G06690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative BnaC01g21030D, Description = BnaC01g21030D protein, PFAM = PF00085)' T '21.1' 'redox.thioredoxin' 'niben101scf39137_1-8252' '(at3g03860 : 263.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.; APR-like 5 (APRL5); INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: APR-like 7 (TAIR:AT5G18120.1); Has 278 Blast hits to 278 proteins in 73 species: Archae - 0; Bacteria - 38; Metazoa - 82; Fungi - 10; Plants - 137; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37851 : 170.0) no description available & (gnl|cdd|48548 : 118.0) no description available & (reliability: 526.0) & (original description: Putative APRL5, Description = 5'-adenylylsulfate reductase-like 5, PFAM = PF00085)' T '21.1.1' 'redox.thioredoxin.PDIL' 'nbv0.3scaffold3009_23110-33729' '(at3g20560 : 692.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin).; PDI-like 5-3 (PDIL5-3); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336), Protein of unknown function DUF1692 (InterPro:IPR012936); BEST Arabidopsis thaliana protein match is: Thioredoxin protein with domain of unknown function (DUF1692) (TAIR:AT1G50950.1); Has 5147 Blast hits to 3670 proteins in 375 species: Archae - 8; Bacteria - 112; Metazoa - 2494; Fungi - 904; Plants - 886; Viruses - 3; Other Eukaryotes - 740 (source: NCBI BLink). & (gnl|cdd|87414 : 190.0) no description available & (gnl|cdd|37878 : 173.0) no description available & (reliability: 1384.0) & (original description: Putative PDI5, Description = Protein disulfide-isomerase 5-4, PFAM = PF07970;PF00085;PF13850)' T '21.1.1' 'redox.thioredoxin.PDIL' 'nbv0.3scaffold22111_18495-27771' '(at3g16110 : 611.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin).; PDI-like 1-6 (PDIL1-6); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-5 (TAIR:AT1G52260.1); Has 9564 Blast hits to 7390 proteins in 1532 species: Archae - 71; Bacteria - 3133; Metazoa - 2543; Fungi - 813; Plants - 1159; Viruses - 1; Other Eukaryotes - 1844 (source: NCBI BLink). & (gnl|cdd|35411 : 380.0) no description available & (p29828|pdi_medsa : 179.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Medicago sativa (Alfalfa) & (gnl|cdd|48544 : 106.0) no description available & (reliability: 1222.0) & (original description: Putative PDI3, Description = Protein disulfide isomerase-like 1-6, PFAM = PF13848;PF00085;PF00085)' T '21.1.1' 'redox.thioredoxin.PDIL' 'nbv0.5scaffold356_693282-814973' '(q43116|pdi_ricco : 617.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Ricinus communis (Castor bean) & (at1g21750 : 590.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily; isoform contains non-consensus GA donor splice site at intron 9. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.; PDI-like 1-1 (PDIL1-1); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-2 (TAIR:AT1G77510.1); Has 30765 Blast hits to 17459 proteins in 2902 species: Archae - 337; Bacteria - 14753; Metazoa - 5498; Fungi - 1629; Plants - 2433; Viruses - 29; Other Eukaryotes - 6086 (source: NCBI BLink). & (gnl|cdd|35411 : 389.0) no description available & (gnl|cdd|48544 : 133.0) no description available & (reliability: 1180.0) & (original description: Putative PGSC0003DMG400004150, Description = Protein disulfide-isomerase, PFAM = PF13848;PF00085;PF00085)' T '21.1.1' 'redox.thioredoxin.PDIL' 'nbv0.5scaffold1997_244844-249940' '(p29828|pdi_medsa : 486.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Medicago sativa (Alfalfa) & (at1g77510 : 463.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; PDI-like 1-2 (PDIL1-2); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: response to cadmium ion, response to salt stress, response to endoplasmic reticulum stress; LOCATED IN: endoplasmic reticulum, plasma membrane, chloroplast; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-1 (TAIR:AT1G21750.1); Has 30299 Blast hits to 17128 proteins in 2902 species: Archae - 354; Bacteria - 14610; Metazoa - 5224; Fungi - 1567; Plants - 2445; Viruses - 29; Other Eukaryotes - 6070 (source: NCBI BLink). & (gnl|cdd|35411 : 314.0) no description available & (gnl|cdd|48544 : 105.0) no description available & (reliability: 926.0) & (original description: Putative PDI, Description = Protein disulfide-isomerase, PFAM = PF13848;PF00085;PF00085)' T '21.1.1' 'redox.thioredoxin.PDIL' 'niben044scf00004540ctg015_2-6405' '(at1g35620 : 400.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants.; PDI-like 5-2 (PDIL5-2); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: PDI-like 1-1 (TAIR:AT1G21750.2); Has 16921 Blast hits to 14897 proteins in 2775 species: Archae - 169; Bacteria - 7975; Metazoa - 3273; Fungi - 1120; Plants - 1363; Viruses - 4; Other Eukaryotes - 3017 (source: NCBI BLink). & (gnl|cdd|35411 : 104.0) no description available & (reliability: 800.0) & (original description: Putative PDI8, Description = Protein disulfide isomerase-like protein, PFAM = PF00085;PF13848)' T '21.1.1' 'redox.thioredoxin.PDIL' 'niben044scf00005161ctg000_5647-13150' '(at1g35620 : 406.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants.; PDI-like 5-2 (PDIL5-2); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: PDI-like 1-1 (TAIR:AT1G21750.2); Has 16921 Blast hits to 14897 proteins in 2775 species: Archae - 169; Bacteria - 7975; Metazoa - 3273; Fungi - 1120; Plants - 1363; Viruses - 4; Other Eukaryotes - 3017 (source: NCBI BLink). & (gnl|cdd|35411 : 98.5) no description available & (reliability: 812.0) & (original description: Putative PDI8, Description = Protein disulfide isomerase-like protein, PFAM = PF00085;PF13848)' T '21.1.1' 'redox.thioredoxin.PDIL' 'niben044scf00009718ctg008_1-3163' '(at5g60640 : 298.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants.; PDI-like 1-4 (PDIL1-4); CONTAINS InterPro DOMAIN/s: Disulphide isomerase (InterPro:IPR005788), Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-3 (TAIR:AT3G54960.1). & (gnl|cdd|35411 : 209.0) no description available & (gnl|cdd|48510 : 111.0) no description available & (q43116|pdi_ricco : 94.4) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Ricinus communis (Castor bean) & (reliability: 596.0) & (original description: Putative p4hb, Description = Protein disulfide-isomerase, PFAM = PF13848;PF00085)' T '21.1.1' 'redox.thioredoxin.PDIL' 'niben044scf00013667ctg004_1114-8365' '(q43116|pdi_ricco : 691.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Ricinus communis (Castor bean) & (at1g21750 : 625.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily; isoform contains non-consensus GA donor splice site at intron 9. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.; PDI-like 1-1 (PDIL1-1); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-2 (TAIR:AT1G77510.1); Has 30765 Blast hits to 17459 proteins in 2902 species: Archae - 337; Bacteria - 14753; Metazoa - 5498; Fungi - 1629; Plants - 2433; Viruses - 29; Other Eukaryotes - 6086 (source: NCBI BLink). & (gnl|cdd|35411 : 415.0) no description available & (gnl|cdd|48544 : 134.0) no description available & (reliability: 1250.0) & (original description: Putative PDI, Description = Protein disulfide-isomerase, PFAM = PF13848;PF00085;PF00085)' T '21.1.1' 'redox.thioredoxin.PDIL' 'niben044scf00014930ctg014_1801-7156' '(at5g60640 : 362.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants.; PDI-like 1-4 (PDIL1-4); CONTAINS InterPro DOMAIN/s: Disulphide isomerase (InterPro:IPR005788), Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-3 (TAIR:AT3G54960.1). & (gnl|cdd|35411 : 230.0) no description available & (q43116|pdi_ricco : 131.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Ricinus communis (Castor bean) & (gnl|cdd|48510 : 126.0) no description available & (reliability: 724.0) & (original description: Putative 784, Description = Protein disulfide-isomerase, PFAM = PF13848;PF00085)' T '21.1.1' 'redox.thioredoxin.PDIL' 'niben044scf00039262ctg000_1327-10112' '(at1g04980 : 598.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; PDI-like 2-2 (PDIL2-2); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 2-3 (TAIR:AT2G32920.1); Has 36254 Blast hits to 18629 proteins in 2906 species: Archae - 392; Bacteria - 18066; Metazoa - 5792; Fungi - 2053; Plants - 2624; Viruses - 46; Other Eukaryotes - 7281 (source: NCBI BLink). & (gnl|cdd|35412 : 271.0) no description available & (gnl|cdd|48532 : 181.0) no description available & (p38661|pdia6_medsa : 129.0) Probable protein disulfide-isomerase A6 precursor (EC 5.3.4.1) (P5) - Medicago sativa (Alfalfa) & (reliability: 1196.0) & (original description: Putative pdia6, Description = Protein disulfide-isomerase A6, PFAM = PF00085;PF00085)' T '21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf00332_459356-466898' '(p38661|pdia6_medsa : 539.0) Probable protein disulfide-isomerase A6 precursor (EC 5.3.4.1) (P5) - Medicago sativa (Alfalfa) & (at2g47470 : 531.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; UNFERTILIZED EMBRYO SAC 5 (UNE5); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: response to endoplasmic reticulum stress, double fertilization forming a zygote and endosperm, embryo sac development, pollen tube development, embryo development ending in seed dormancy; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Endoplasmic reticulum, protein ERp29, C-terminal (InterPro:IPR011679), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 2-2 (TAIR:AT1G04980.1); Has 37639 Blast hits to 19288 proteins in 2969 species: Archae - 403; Bacteria - 17566; Metazoa - 6414; Fungi - 2106; Plants - 3416; Viruses - 32; Other Eukaryotes - 7702 (source: NCBI BLink). & (gnl|cdd|35412 : 226.0) no description available & (gnl|cdd|48547 : 173.0) no description available & (reliability: 1062.0) & (original description: Putative pdi, Description = Protein disulfide isomerase, PFAM = PF07749;PF00085;PF00085)' T '21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf00466_449006-456919' '(p38661|pdia6_medsa : 536.0) Probable protein disulfide-isomerase A6 precursor (EC 5.3.4.1) (P5) - Medicago sativa (Alfalfa) & (at2g47470 : 523.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; UNFERTILIZED EMBRYO SAC 5 (UNE5); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: response to endoplasmic reticulum stress, double fertilization forming a zygote and endosperm, embryo sac development, pollen tube development, embryo development ending in seed dormancy; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Endoplasmic reticulum, protein ERp29, C-terminal (InterPro:IPR011679), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 2-2 (TAIR:AT1G04980.1); Has 37639 Blast hits to 19288 proteins in 2969 species: Archae - 403; Bacteria - 17566; Metazoa - 6414; Fungi - 2106; Plants - 3416; Viruses - 32; Other Eukaryotes - 7702 (source: NCBI BLink). & (gnl|cdd|35412 : 228.0) no description available & (gnl|cdd|48547 : 171.0) no description available & (reliability: 1046.0) & (original description: Putative pdi, Description = Protein disulfide isomerase, PFAM = PF00085;PF00085;PF07749)' T '21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf00494_498690-506683' '(at1g35620 : 469.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants.; PDI-like 5-2 (PDIL5-2); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: PDI-like 1-1 (TAIR:AT1G21750.2); Has 16921 Blast hits to 14897 proteins in 2775 species: Archae - 169; Bacteria - 7975; Metazoa - 3273; Fungi - 1120; Plants - 1363; Viruses - 4; Other Eukaryotes - 3017 (source: NCBI BLink). & (gnl|cdd|35411 : 144.0) no description available & (q43116|pdi_ricco : 120.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Ricinus communis (Castor bean) & (gnl|cdd|48510 : 110.0) no description available & (reliability: 938.0) & (original description: Putative PDI, Description = Protein disulfide-isomerase, PFAM = PF13848;PF00085)' T '21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf01027_241076-247013' '(p29828|pdi_medsa : 502.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Medicago sativa (Alfalfa) & (at1g77510 : 485.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; PDI-like 1-2 (PDIL1-2); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: response to cadmium ion, response to salt stress, response to endoplasmic reticulum stress; LOCATED IN: endoplasmic reticulum, plasma membrane, chloroplast; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-1 (TAIR:AT1G21750.1); Has 30299 Blast hits to 17128 proteins in 2902 species: Archae - 354; Bacteria - 14610; Metazoa - 5224; Fungi - 1567; Plants - 2445; Viruses - 29; Other Eukaryotes - 6070 (source: NCBI BLink). & (gnl|cdd|35411 : 353.0) no description available & (gnl|cdd|48510 : 108.0) no description available & (reliability: 970.0) & (original description: Putative PDI, Description = Protein disulfide-isomerase, PFAM = PF00085;PF00085;PF13848)' T '21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf01374_242621-252141' '(at3g16110 : 604.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin).; PDI-like 1-6 (PDIL1-6); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-5 (TAIR:AT1G52260.1); Has 9564 Blast hits to 7390 proteins in 1532 species: Archae - 71; Bacteria - 3133; Metazoa - 2543; Fungi - 813; Plants - 1159; Viruses - 1; Other Eukaryotes - 1844 (source: NCBI BLink). & (gnl|cdd|35411 : 374.0) no description available & (p29828|pdi_medsa : 179.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Medicago sativa (Alfalfa) & (gnl|cdd|48544 : 107.0) no description available & (reliability: 1208.0) & (original description: Putative PDI3, Description = Protein disulfide isomerase-like 1-6, PFAM = PF13848;PF00085;PF00085)' T '21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf01594_505631-511262' '(q43116|pdi_ricco : 601.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Ricinus communis (Castor bean) & (at1g21750 : 578.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily; isoform contains non-consensus GA donor splice site at intron 9. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.; PDI-like 1-1 (PDIL1-1); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-2 (TAIR:AT1G77510.1); Has 30765 Blast hits to 17459 proteins in 2902 species: Archae - 337; Bacteria - 14753; Metazoa - 5498; Fungi - 1629; Plants - 2433; Viruses - 29; Other Eukaryotes - 6086 (source: NCBI BLink). & (gnl|cdd|35411 : 412.0) no description available & (gnl|cdd|48544 : 134.0) no description available & (reliability: 1156.0) & (original description: Putative PDI, Description = Protein disulfide-isomerase, PFAM = PF13848;PF00085;PF00085)' T '21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf03012_484575-492760' '(at1g35620 : 467.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants.; PDI-like 5-2 (PDIL5-2); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: PDI-like 1-1 (TAIR:AT1G21750.2); Has 16921 Blast hits to 14897 proteins in 2775 species: Archae - 169; Bacteria - 7975; Metazoa - 3273; Fungi - 1120; Plants - 1363; Viruses - 4; Other Eukaryotes - 3017 (source: NCBI BLink). & (gnl|cdd|35411 : 159.0) no description available & (gnl|cdd|48510 : 114.0) no description available & (q43116|pdi_ricco : 111.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Ricinus communis (Castor bean) & (reliability: 934.0) & (original description: Putative PDI, Description = Protein disulfide-isomerase, PFAM = PF13848;PF00085)' T '21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf03044_9196-22791' '(at3g20560 : 694.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin).; PDI-like 5-3 (PDIL5-3); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336), Protein of unknown function DUF1692 (InterPro:IPR012936); BEST Arabidopsis thaliana protein match is: Thioredoxin protein with domain of unknown function (DUF1692) (TAIR:AT1G50950.1); Has 5147 Blast hits to 3670 proteins in 375 species: Archae - 8; Bacteria - 112; Metazoa - 2494; Fungi - 904; Plants - 886; Viruses - 3; Other Eukaryotes - 740 (source: NCBI BLink). & (gnl|cdd|87414 : 191.0) no description available & (gnl|cdd|37878 : 176.0) no description available & (reliability: 1388.0) & (original description: Putative PDI5, Description = Protein disulfide-isomerase 5-4, PFAM = PF00085;PF13850;PF07970)' T '21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf03226_365670-371996' '(p29828|pdi_medsa : 525.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Medicago sativa (Alfalfa) & (at1g77510 : 504.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; PDI-like 1-2 (PDIL1-2); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: response to cadmium ion, response to salt stress, response to endoplasmic reticulum stress; LOCATED IN: endoplasmic reticulum, plasma membrane, chloroplast; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-1 (TAIR:AT1G21750.1); Has 30299 Blast hits to 17128 proteins in 2902 species: Archae - 354; Bacteria - 14610; Metazoa - 5224; Fungi - 1567; Plants - 2445; Viruses - 29; Other Eukaryotes - 6070 (source: NCBI BLink). & (gnl|cdd|35411 : 348.0) no description available & (gnl|cdd|48510 : 108.0) no description available & (reliability: 1008.0) & (original description: Putative PDI, Description = Protein disulfide-isomerase, PFAM = PF13848;PF00085;PF00085)' T '21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf04494_20178-29454' '(at3g16110 : 568.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin).; PDI-like 1-6 (PDIL1-6); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-5 (TAIR:AT1G52260.1); Has 9564 Blast hits to 7390 proteins in 1532 species: Archae - 71; Bacteria - 3133; Metazoa - 2543; Fungi - 813; Plants - 1159; Viruses - 1; Other Eukaryotes - 1844 (source: NCBI BLink). & (gnl|cdd|35411 : 354.0) no description available & (p29828|pdi_medsa : 167.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Medicago sativa (Alfalfa) & (gnl|cdd|48544 : 106.0) no description available & (reliability: 1136.0) & (original description: Putative PDI3, Description = Protein disulfide isomerase-like 1-6, PFAM = PF00085;PF00085;PF13848)' T '21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf04582_347753-363790' '(q43116|pdi_ricco : 604.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Ricinus communis (Castor bean) & (at1g21750 : 582.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily; isoform contains non-consensus GA donor splice site at intron 9. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.; PDI-like 1-1 (PDIL1-1); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-2 (TAIR:AT1G77510.1); Has 30765 Blast hits to 17459 proteins in 2902 species: Archae - 337; Bacteria - 14753; Metazoa - 5498; Fungi - 1629; Plants - 2433; Viruses - 29; Other Eukaryotes - 6086 (source: NCBI BLink). & (gnl|cdd|35411 : 381.0) no description available & (gnl|cdd|48544 : 127.0) no description available & (reliability: 1164.0) & (original description: Putative PDI, Description = Protein disulfide-isomerase, PFAM = PF13848;PF00085;PF00085)' T '21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf05372_209651-217463' '(at5g60640 : 570.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants.; PDI-like 1-4 (PDIL1-4); CONTAINS InterPro DOMAIN/s: Disulphide isomerase (InterPro:IPR005788), Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-3 (TAIR:AT3G54960.1). & (gnl|cdd|35411 : 370.0) no description available & (p52588|pdi_maize : 195.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Zea mays (Maize) & (gnl|cdd|48544 : 131.0) no description available & (reliability: 1140.0) & (original description: Putative P4HB, Description = Protein disulfide-isomerase, PFAM = PF13848;PF00085;PF00085)' T '21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf05405_870799-881966' '(at5g60640 : 582.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants.; PDI-like 1-4 (PDIL1-4); CONTAINS InterPro DOMAIN/s: Disulphide isomerase (InterPro:IPR005788), Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-3 (TAIR:AT3G54960.1). & (gnl|cdd|35411 : 391.0) no description available & (q43116|pdi_ricco : 189.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Ricinus communis (Castor bean) & (gnl|cdd|48544 : 148.0) no description available & (reliability: 1164.0) & (original description: Putative P4HB, Description = Protein disulfide-isomerase, PFAM = PF00085;PF00085;PF13848)' T '21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf07423_398068-407493' '(at1g07960 : 184.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily.; PDI-like 5-1 (PDIL5-1); INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin family protein (TAIR:AT2G47470.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|48554 : 107.0) no description available & (gnl|cdd|35412 : 94.5) no description available & (reliability: 368.0) & (original description: Putative PDIL5-1, Description = Protein disulfide-isomerase 5-1, PFAM = PF00085)' T '21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf07533_394922-402590' '(at1g04980 : 301.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; PDI-like 2-2 (PDIL2-2); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 2-3 (TAIR:AT2G32920.1); Has 36254 Blast hits to 18629 proteins in 2906 species: Archae - 392; Bacteria - 18066; Metazoa - 5792; Fungi - 2053; Plants - 2624; Viruses - 46; Other Eukaryotes - 7281 (source: NCBI BLink). & (gnl|cdd|48532 : 182.0) no description available & (gnl|cdd|35412 : 89.5) no description available & (reliability: 602.0) & (original description: Putative pdia6, Description = Protein disulfide-isomerase A6, PFAM = PF13848)' T '21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf09264_31184-44090' '(at5g60640 : 660.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants.; PDI-like 1-4 (PDIL1-4); CONTAINS InterPro DOMAIN/s: Disulphide isomerase (InterPro:IPR005788), Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-3 (TAIR:AT3G54960.1). & (gnl|cdd|35411 : 407.0) no description available & (q43116|pdi_ricco : 226.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Ricinus communis (Castor bean) & (gnl|cdd|48544 : 149.0) no description available & (reliability: 1320.0) & (original description: Putative pdi, Description = Protein disulfide-isomerase, PFAM = PF00085;PF00085;PF13848)' T '21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf10505_133919-159818' '(q43116|pdi_ricco : 573.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Ricinus communis (Castor bean) & (at1g21750 : 552.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily; isoform contains non-consensus GA donor splice site at intron 9. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.; PDI-like 1-1 (PDIL1-1); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-2 (TAIR:AT1G77510.1); Has 30765 Blast hits to 17459 proteins in 2902 species: Archae - 337; Bacteria - 14753; Metazoa - 5498; Fungi - 1629; Plants - 2433; Viruses - 29; Other Eukaryotes - 6086 (source: NCBI BLink). & (gnl|cdd|35411 : 381.0) no description available & (gnl|cdd|48544 : 132.0) no description available & (reliability: 1104.0) & (original description: Putative PDI, Description = Protein disulfide isomerase, PFAM = PF00085;PF00085;PF13848)' T '21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf10528_184861-191845' '(q43116|pdi_ricco : 662.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Ricinus communis (Castor bean) & (at1g21750 : 608.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily; isoform contains non-consensus GA donor splice site at intron 9. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.; PDI-like 1-1 (PDIL1-1); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-2 (TAIR:AT1G77510.1); Has 30765 Blast hits to 17459 proteins in 2902 species: Archae - 337; Bacteria - 14753; Metazoa - 5498; Fungi - 1629; Plants - 2433; Viruses - 29; Other Eukaryotes - 6086 (source: NCBI BLink). & (gnl|cdd|35411 : 418.0) no description available & (gnl|cdd|48544 : 136.0) no description available & (reliability: 1216.0) & (original description: Putative PDI, Description = Protein disulfide-isomerase, PFAM = PF00085;PF00085;PF13848)' T '21.1.1' 'redox.thioredoxin.PDIL' 'niben101scf33522_28464-37579' '(at1g04980 : 625.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; PDI-like 2-2 (PDIL2-2); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 2-3 (TAIR:AT2G32920.1); Has 36254 Blast hits to 18629 proteins in 2906 species: Archae - 392; Bacteria - 18066; Metazoa - 5792; Fungi - 2053; Plants - 2624; Viruses - 46; Other Eukaryotes - 7281 (source: NCBI BLink). & (gnl|cdd|35412 : 274.0) no description available & (gnl|cdd|48532 : 183.0) no description available & (p38661|pdia6_medsa : 140.0) Probable protein disulfide-isomerase A6 precursor (EC 5.3.4.1) (P5) - Medicago sativa (Alfalfa) & (reliability: 1250.0) & (original description: Putative pdia6, Description = Protein disulfide-isomerase A6, PFAM = PF00085;PF00085)' T '21.1.2' 'redox.thioredoxin.QSOX' 'niben101scf08388_55848-66526' '(at1g15020 : 677.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the quiescin-sulfhydryl oxidase (QSOX) family, which possess an Erv1-like domain at the COOH terminus in addition to a TRX domain.; quiescin-sulfhydryl oxidase 1 (QSOX1); FUNCTIONS IN: thiol oxidase activity, zinc ion binding; INVOLVED IN: response to cation stress; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Zinc finger, RING-type (InterPro:IPR001841), Erv1/Alr (InterPro:IPR006863), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), ERV/ALR sulphydryl oxidase (InterPro:IPR017905), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: quiescin-sulfhydryl oxidase 2 (TAIR:AT2G01270.1); Has 2372 Blast hits to 1975 proteins in 299 species: Archae - 18; Bacteria - 46; Metazoa - 1235; Fungi - 321; Plants - 448; Viruses - 0; Other Eukaryotes - 304 (source: NCBI BLink). & (gnl|cdd|36942 : 379.0) no description available & (gnl|cdd|48541 : 119.0) no description available & (reliability: 1354.0) & (original description: Putative QSOX1, Description = Sulfhydryl oxidase 1, PFAM = PF04777;PF00085)' T '21.1.2' 'redox.thioredoxin.QSOX' 'niben101scf11980_83650-91018' '(at1g15020 : 637.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the quiescin-sulfhydryl oxidase (QSOX) family, which possess an Erv1-like domain at the COOH terminus in addition to a TRX domain.; quiescin-sulfhydryl oxidase 1 (QSOX1); FUNCTIONS IN: thiol oxidase activity, zinc ion binding; INVOLVED IN: response to cation stress; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Zinc finger, RING-type (InterPro:IPR001841), Erv1/Alr (InterPro:IPR006863), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), ERV/ALR sulphydryl oxidase (InterPro:IPR017905), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: quiescin-sulfhydryl oxidase 2 (TAIR:AT2G01270.1); Has 2372 Blast hits to 1975 proteins in 299 species: Archae - 18; Bacteria - 46; Metazoa - 1235; Fungi - 321; Plants - 448; Viruses - 0; Other Eukaryotes - 304 (source: NCBI BLink). & (gnl|cdd|36942 : 364.0) no description available & (gnl|cdd|48541 : 114.0) no description available & (reliability: 1274.0) & (original description: Putative QSOX1, Description = Sulfhydryl oxidase 1, PFAM = PF00085;PF04777)' T '21.2' 'redox.ascorbate and glutathione' 'nbv0.3scaffold19408_29148-34378' '(gnl|cdd|35365 : 211.0) no description available & (gnl|cdd|33294 : 177.0) no description available & (at3g11180 : 140.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 132.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 270.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T '21.2' 'redox.ascorbate and glutathione' 'nbv0.3scaffold38876_1-2875' '(gnl|cdd|36832 : 185.0) no description available & (at1g14730 : 184.0) Cytochrome b561/ferric reductase transmembrane protein family; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane protein family (TAIR:AT4G25570.1); Has 599 Blast hits to 596 proteins in 97 species: Archae - 0; Bacteria - 0; Metazoa - 368; Fungi - 6; Plants - 197; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|86268 : 115.0) no description available & (reliability: 368.0) & (original description: Putative CYB561C, Description = Probable transmembrane ascorbate ferrireductase 3, PFAM = PF03188)' T '21.2' 'redox.ascorbate and glutathione' 'nbv0.3scaffold43392_373-4024' '(at1g26340 : 162.0) encodes a member of the cytochromes b5 family of proteins that localizes to the outer envelope of the chloroplast. The C-terminal portion of the protein appears to be capable of inserting into a plant microsomal membrane in vitro.; cytochrome B5 isoform A (CB5-A); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform B (TAIR:AT2G32720.1); Has 4207 Blast hits to 4178 proteins in 465 species: Archae - 2; Bacteria - 26; Metazoa - 1058; Fungi - 1672; Plants - 799; Viruses - 3; Other Eukaryotes - 647 (source: NCBI BLink). & (gnl|cdd|35757 : 120.0) no description available & (p49098|cyb5_tobac : 115.0) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84581 : 111.0) no description available & (reliability: 324.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T '21.2' 'redox.ascorbate and glutathione' 'nbv0.3scaffold60610_976-10771' '(at2g25080 : 291.0) Encodes glutathione peroxidase.; glutathione peroxidase 1 (GPX1); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 7 (TAIR:AT4G31870.1); Has 7896 Blast hits to 7895 proteins in 1765 species: Archae - 2; Bacteria - 4003; Metazoa - 799; Fungi - 210; Plants - 390; Viruses - 8; Other Eukaryotes - 2484 (source: NCBI BLink). & (o24296|gpx1_pea : 287.0) Phospholipid hydroperoxide glutathione peroxidase, chloroplast precursor (EC 1.11.1.12) (PHGPx) - Pisum sativum (Garden pea) & (gnl|cdd|36864 : 267.0) no description available & (gnl|cdd|48492 : 246.0) no description available & (reliability: 582.0) & (original description: Putative gpx, Description = Glutathione peroxidase, PFAM = PF00255)' T '21.2' 'redox.ascorbate and glutathione' 'nbv0.3scaffold75461_993-5656' '(at1g06620 : 436.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 382.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 288.0) no description available & (gnl|cdd|33294 : 143.0) no description available & (reliability: 872.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase isogeny 1, PFAM = PF14226;PF03171)' T '21.2' 'redox.ascorbate and glutathione' 'nbv0.5scaffold1546_17778-27828' '(at5g59540 : 117.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G59530.1); Has 7263 Blast hits to 7229 proteins in 962 species: Archae - 0; Bacteria - 1031; Metazoa - 70; Fungi - 654; Plants - 4685; Viruses - 0; Other Eukaryotes - 823 (source: NCBI BLink). & (o04847|dv4h_catro : 93.6) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 83.5) no description available & (reliability: 220.0) & (original description: Putative BnaA09g50540D, Description = Desacetoxyvindoline 4-hydroxylase, putative, PFAM = PF14226)' T '21.2' 'redox.ascorbate and glutathione' 'nbv0.5scaffold3164_84944-98626' '(gnl|cdd|35365 : 268.0) no description available & (at1g06650 : 247.0) encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G06640.1); Has 8180 Blast hits to 8149 proteins in 985 species: Archae - 0; Bacteria - 1067; Metazoa - 118; Fungi - 802; Plants - 4889; Viruses - 0; Other Eukaryotes - 1304 (source: NCBI BLink). & (o04847|dv4h_catro : 231.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|33294 : 140.0) no description available & (reliability: 494.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase-like protein, PFAM = PF14226;PF03171)' T '21.2' 'redox.ascorbate and glutathione' 'nbv0.5scaffold4903_2209-6241' '(at5g52240 : 208.0) Encodes a protein with similarity to progesterone-binding proteins in animals. Has been shown to bind steroids in vitro. Expressed in aerial portions of the plant excluding mature flowers and siliques. Antisense experiments suggest a role in inhibition of hypocotyl cell elongation. Expression is suppressed light grown seedlings transferred to the dark.; membrane steroid binding protein 1 (MSBP1); CONTAINS InterPro DOMAIN/s: Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: membrane-associated progesterone binding protein 3 (TAIR:AT3G48890.1). & (gnl|cdd|36326 : 165.0) no description available & (reliability: 416.0) & (original description: Putative MP1, Description = Membrane steroid-binding protein 2, PFAM = PF00173)' T '21.2' 'redox.ascorbate and glutathione' 'nbv0.5scaffold5521_40017-44610' '(at1g06620 : 426.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 417.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 289.0) no description available & (gnl|cdd|33294 : 151.0) no description available & (reliability: 852.0) & (original description: Putative D4H, Description = Deacetoxyvindoline 4-hydroxylase, PFAM = PF14226;PF14226;PF03171)' T '21.2' 'redox.ascorbate and glutathione' 'niben044scf00009732ctg014_257-6558' '(q42711|mdars_cucsa : 674.0) Monodehydroascorbate reductase, seedling isozyme (EC 1.6.5.4) (MDAR seedling) (Ascorbate free radical reductase seedling) (AFR reductase seedling) - Cucumis sativus (Cucumber) & (at3g52880 : 643.0) Encodes a peroxisomal monodehydroascorbate reductase, involved in the ascorbate-glutathione cycle which removes toxic H2O2; monodehydroascorbate reductase 1 (MDAR1); CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: Pyridine nucleotide-disulphide oxidoreductase family protein (TAIR:AT5G03630.1); Has 30852 Blast hits to 30793 proteins in 3038 species: Archae - 685; Bacteria - 24210; Metazoa - 865; Fungi - 584; Plants - 707; Viruses - 0; Other Eukaryotes - 3801 (source: NCBI BLink). & (gnl|cdd|36550 : 492.0) no description available & (gnl|cdd|87424 : 183.0) no description available & (reliability: 1286.0) & (original description: Putative AFRR, Description = Monodehydroascorbate reductase, PFAM = PF07992)' T '21.2' 'redox.ascorbate and glutathione' 'niben044scf00009817ctg010_113-2460' '(at3g48890 : 94.0) putative progesterone-binding protein homolog (Atmp2) mRNA,; membrane-associated progesterone binding protein 3 (MAPR3); FUNCTIONS IN: heme binding; LOCATED IN: chloroplast thylakoid membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: membrane steroid binding protein 1 (TAIR:AT5G52240.1); Has 1079 Blast hits to 1069 proteins in 199 species: Archae - 0; Bacteria - 2; Metazoa - 428; Fungi - 337; Plants - 203; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (gnl|cdd|36326 : 90.4) no description available & (reliability: 188.0) & (original description: Putative MSBP1, Description = Membrane-associated progesterone receptor component 1, PFAM = )' T '21.2' 'redox.ascorbate and glutathione' 'niben044scf00014869ctg001_21343-24834' '(gnl|cdd|35365 : 171.0) no description available & (gnl|cdd|33294 : 134.0) no description available & (at4g25420 : 132.0) Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light.; GA20OX1; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 20 oxidase 2 (TAIR:AT5G51810.1); Has 8544 Blast hits to 8501 proteins in 990 species: Archae - 0; Bacteria - 1084; Metazoa - 124; Fungi - 981; Plants - 4942; Viruses - 0; Other Eukaryotes - 1413 (source: NCBI BLink). & (q06942|fl3h_maldo : 129.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 256.0) & (original description: Putative PGSC0003DMG400039990, Description = Gibberellin 20 oxidase, putative, PFAM = PF03171;PF14226)' T '21.2' 'redox.ascorbate and glutathione' 'niben044scf00020533ctg002_17814-20503' '(at1g06620 : 177.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 144.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 130.0) no description available & (gnl|cdd|33294 : 90.7) no description available & (reliability: 354.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase-like protein, PFAM = PF03171)' T '21.2' 'redox.ascorbate and glutathione' 'niben044scf00021808ctg002_1-3503' '(at5g52240 : 216.0) Encodes a protein with similarity to progesterone-binding proteins in animals. Has been shown to bind steroids in vitro. Expressed in aerial portions of the plant excluding mature flowers and siliques. Antisense experiments suggest a role in inhibition of hypocotyl cell elongation. Expression is suppressed light grown seedlings transferred to the dark.; membrane steroid binding protein 1 (MSBP1); CONTAINS InterPro DOMAIN/s: Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: membrane-associated progesterone binding protein 3 (TAIR:AT3G48890.1). & (gnl|cdd|36326 : 171.0) no description available & (reliability: 432.0) & (original description: Putative MSBP2, Description = Membrane steroid-binding protein 2, PFAM = PF00173)' T '21.2' 'redox.ascorbate and glutathione' 'niben044scf00022632ctg001_1-4235' '(at4g25570 : 272.0) Encodes cytochrome b561.; ACYB-2; FUNCTIONS IN: carbon-monoxide oxygenase activity; LOCATED IN: integral to membrane, chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: cytochrome B561-1 (TAIR:AT5G38630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36832 : 224.0) no description available & (gnl|cdd|86268 : 169.0) no description available & (reliability: 544.0) & (original description: Putative CYB561A, Description = Transmembrane ascorbate ferrireductase 1, PFAM = PF03188)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf00415_85546-89896' '(at1g06620 : 400.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 340.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 288.0) no description available & (gnl|cdd|33294 : 160.0) no description available & (reliability: 800.0) & (original description: Putative ACO3, Description = 1-aminocyclopropane-1-carboxylate oxidase homolog, PFAM = PF03171;PF14226)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf00626_272517-276455' '(at5g52240 : 234.0) Encodes a protein with similarity to progesterone-binding proteins in animals. Has been shown to bind steroids in vitro. Expressed in aerial portions of the plant excluding mature flowers and siliques. Antisense experiments suggest a role in inhibition of hypocotyl cell elongation. Expression is suppressed light grown seedlings transferred to the dark.; membrane steroid binding protein 1 (MSBP1); CONTAINS InterPro DOMAIN/s: Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: membrane-associated progesterone binding protein 3 (TAIR:AT3G48890.1). & (gnl|cdd|36326 : 178.0) no description available & (reliability: 468.0) & (original description: Putative MSBP1, Description = Membrane steroid-binding protein 1, PFAM = PF00173)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf00821_1211295-1219772' '(at3g48890 : 255.0) putative progesterone-binding protein homolog (Atmp2) mRNA,; membrane-associated progesterone binding protein 3 (MAPR3); FUNCTIONS IN: heme binding; LOCATED IN: chloroplast thylakoid membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: membrane steroid binding protein 1 (TAIR:AT5G52240.1); Has 1079 Blast hits to 1069 proteins in 199 species: Archae - 0; Bacteria - 2; Metazoa - 428; Fungi - 337; Plants - 203; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (gnl|cdd|36326 : 178.0) no description available & (reliability: 510.0) & (original description: Putative MP1, Description = Membrane steroid-binding protein 2, PFAM = PF00173)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf00869_675253-682381' '(at5g09680 : 234.0) Encodes RLF (Reduced Lateral root Formation). Involved in lateral root formation. Contains a cytochrome b5-like heme/steroid binding domain. Localized in the cytosol.; reduced lateral root formation (RLF); FUNCTIONS IN: heme binding; INVOLVED IN: lateral root formation; LOCATED IN: cytosol; EXPRESSED IN: stem, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform A (TAIR:AT1G26340.1); Has 3049 Blast hits to 3033 proteins in 420 species: Archae - 2; Bacteria - 7; Metazoa - 694; Fungi - 1150; Plants - 759; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|35756 : 157.0) no description available & (gnl|cdd|84581 : 85.7) no description available & (reliability: 468.0) & (original description: Putative RLF, Description = Cytochrome b5 domain-containing protein RLF, PFAM = PF00173)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf00951_56731-62315' '(at1g06620 : 423.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 382.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 303.0) no description available & (gnl|cdd|33294 : 155.0) no description available & (reliability: 846.0) & (original description: Putative p69RF, Description = 2OG-Fe(II) oxygenase family oxidoreductase, PFAM = PF14226;PF03171)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf00984_837881-841157' '(gnl|cdd|36832 : 183.0) no description available & (at1g14730 : 163.0) Cytochrome b561/ferric reductase transmembrane protein family; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane protein family (TAIR:AT4G25570.1); Has 599 Blast hits to 596 proteins in 97 species: Archae - 0; Bacteria - 0; Metazoa - 368; Fungi - 6; Plants - 197; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|86268 : 135.0) no description available & (reliability: 326.0) & (original description: Putative Os02g0642300, Description = Probable ascorbate-specific transmembrane electron transporter 1, PFAM = PF03188)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf00984_905337-909397' '(gnl|cdd|36832 : 183.0) no description available & (at1g14730 : 182.0) Cytochrome b561/ferric reductase transmembrane protein family; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane protein family (TAIR:AT4G25570.1); Has 599 Blast hits to 596 proteins in 97 species: Archae - 0; Bacteria - 0; Metazoa - 368; Fungi - 6; Plants - 197; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|86268 : 111.0) no description available & (reliability: 364.0) & (original description: Putative CYB561C, Description = Probable transmembrane ascorbate ferrireductase 3, PFAM = PF03188)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf01018_165243-171932' '(p49098|cyb5_tobac : 268.0) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (at2g32720 : 218.0) member of Cytochromes b5; cytochrome B5 isoform B (CB5-B); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform D (TAIR:AT5G48810.1); Has 4197 Blast hits to 4166 proteins in 470 species: Archae - 2; Bacteria - 26; Metazoa - 1028; Fungi - 1701; Plants - 800; Viruses - 3; Other Eukaryotes - 637 (source: NCBI BLink). & (gnl|cdd|35757 : 138.0) no description available & (gnl|cdd|84581 : 113.0) no description available & (reliability: 436.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf01033_325722-342682' '(gnl|cdd|35365 : 269.0) no description available & (at1g06620 : 247.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 232.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|33294 : 140.0) no description available & (reliability: 494.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase-like protein, PFAM = PF03171;PF14226)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf01035_575661-581958' '(at3g48890 : 176.0) putative progesterone-binding protein homolog (Atmp2) mRNA,; membrane-associated progesterone binding protein 3 (MAPR3); FUNCTIONS IN: heme binding; LOCATED IN: chloroplast thylakoid membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: membrane steroid binding protein 1 (TAIR:AT5G52240.1); Has 1079 Blast hits to 1069 proteins in 199 species: Archae - 0; Bacteria - 2; Metazoa - 428; Fungi - 337; Plants - 203; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (gnl|cdd|36326 : 150.0) no description available & (reliability: 352.0) & (original description: Putative Os02g0793700, Description = Cytochrome b5 domain-containing protein-like, PFAM = PF00173)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf01338_388918-391332' '(at1g26100 : 122.0) Cytochrome b561/ferric reductase transmembrane protein family; FUNCTIONS IN: carbon-monoxide oxygenase activity; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: cytochrome B561-1 (TAIR:AT5G38630.1); Has 590 Blast hits to 588 proteins in 96 species: Archae - 0; Bacteria - 0; Metazoa - 373; Fungi - 7; Plants - 186; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|36832 : 95.3) no description available & (reliability: 244.0) & (original description: Putative CYB561D, Description = Cytochrome B561 family protein, PFAM = PF03188)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf01434_147876-150838' '(gnl|cdd|36832 : 163.0) no description available & (at1g14730 : 138.0) Cytochrome b561/ferric reductase transmembrane protein family; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane protein family (TAIR:AT4G25570.1); Has 599 Blast hits to 596 proteins in 97 species: Archae - 0; Bacteria - 0; Metazoa - 368; Fungi - 6; Plants - 197; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|86268 : 127.0) no description available & (reliability: 276.0) & (original description: Putative ZCYB, Description = Cytochrome b561 family protein, expressed, PFAM = PF03188)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf01574_369327-373502' '(at3g19000 : 380.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G19010.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 282.0) no description available & (gnl|cdd|33294 : 218.0) no description available & (p41090|fl3h_vitvi : 144.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Vitis vinifera (Grape) & (reliability: 760.0) & (original description: Putative SAN1A, Description = Senescence-associated nodulin 1A, PFAM = PF14226;PF03171)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf01927_151000-155100' '(at1g60660 : 137.0) member of Cytochromes b5; cytochrome B5-like protein (CB5LP); FUNCTIONS IN: heme binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform A (TAIR:AT1G26340.1); Has 3645 Blast hits to 3620 proteins in 449 species: Archae - 2; Bacteria - 26; Metazoa - 975; Fungi - 1355; Plants - 764; Viruses - 0; Other Eukaryotes - 523 (source: NCBI BLink). & (gnl|cdd|35757 : 99.0) no description available & (gnl|cdd|84581 : 88.0) no description available & (reliability: 274.0) & (original description: Putative CB5LP, Description = Cytochrome B5-like protein, PFAM = PF00173)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf02063_238737-242446' '(at1g06620 : 431.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 375.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 303.0) no description available & (gnl|cdd|33294 : 167.0) no description available & (reliability: 862.0) & (original description: Putative ACO3, Description = 1-aminocyclopropane-1-carboxylate oxidase homolog, PFAM = PF03171;PF14226)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf02063_275991-280564' '(o04847|dv4h_catro : 139.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g06620 : 134.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (gnl|cdd|35365 : 83.9) no description available & (reliability: 268.0) & (original description: Putative p69RF, Description = Desacetoxyvindoline 4-hydroxylase, putative, PFAM = PF14226)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf02063_280565-289513' '(o04847|dv4h_catro : 379.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g06620 : 363.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (gnl|cdd|35365 : 276.0) no description available & (gnl|cdd|33294 : 154.0) no description available & (reliability: 726.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase isogeny 1, PFAM = PF14226;PF03171)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf02337_127789-132207' '(gnl|cdd|35365 : 210.0) no description available & (gnl|cdd|33294 : 178.0) no description available & (at3g11180 : 138.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 136.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 264.0) & (original description: Putative GA7ox1, Description = Flavonol synthase/flavanone 3-hydroxylase, PFAM = PF14226;PF03171)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf02427_428016-448042' '(gnl|cdd|35757 : 111.0) no description available & (at5g48810 : 103.0) Encodes a cytochrome b5 isoform that localizes to the ER. The C-terminal portion of the protein appears to be capable of inserting into a plant microsomal membrane in vitro and the protein appears to be subject to glycosylation.; cytochrome B5 isoform D (CB5-D); FUNCTIONS IN: heme binding; INVOLVED IN: defense response to bacterium; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform B (TAIR:AT2G32720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84581 : 98.0) no description available & (p49098|cyb5_tobac : 96.7) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (reliability: 206.0) & (original description: Putative difF, Description = Cytochrome b5 DIF-F, PFAM = PF00173)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf02526_17646-33800' '(at2g25080 : 293.0) Encodes glutathione peroxidase.; glutathione peroxidase 1 (GPX1); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 7 (TAIR:AT4G31870.1); Has 7896 Blast hits to 7895 proteins in 1765 species: Archae - 2; Bacteria - 4003; Metazoa - 799; Fungi - 210; Plants - 390; Viruses - 8; Other Eukaryotes - 2484 (source: NCBI BLink). & (o24296|gpx1_pea : 290.0) Phospholipid hydroperoxide glutathione peroxidase, chloroplast precursor (EC 1.11.1.12) (PHGPx) - Pisum sativum (Garden pea) & (gnl|cdd|36864 : 265.0) no description available & (gnl|cdd|48492 : 244.0) no description available & (reliability: 586.0) & (original description: Putative gpx, Description = Glutathione peroxidase, PFAM = PF00255)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf02706_85623-87922' '(at2g24940 : 155.0) membrane-associated progesterone binding protein 2 (MAPR2); FUNCTIONS IN: heme binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: membrane steroid binding protein 1 (TAIR:AT5G52240.2); Has 1117 Blast hits to 1108 proteins in 214 species: Archae - 2; Bacteria - 37; Metazoa - 426; Fungi - 339; Plants - 201; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|36326 : 142.0) no description available & (reliability: 310.0) & (original description: Putative MP3, Description = Probable steroid-binding protein 3, PFAM = PF00173)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf02910_131260-136424' '(at4g25570 : 271.0) Encodes cytochrome b561.; ACYB-2; FUNCTIONS IN: carbon-monoxide oxygenase activity; LOCATED IN: integral to membrane, chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: cytochrome B561-1 (TAIR:AT5G38630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36832 : 227.0) no description available & (gnl|cdd|86268 : 167.0) no description available & (reliability: 542.0) & (original description: Putative CYB561A, Description = Transmembrane ascorbate ferrireductase 1, PFAM = PF03188)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf03080_421735-424767' '(at3g19000 : 370.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G19010.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 280.0) no description available & (gnl|cdd|33294 : 225.0) no description available & (o04706|gao1b_wheat : 151.0) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (reliability: 740.0) & (original description: Putative SAN1A, Description = Senescence-associated nodulin 1A, PFAM = PF03171;PF14226)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf03080_424768-433258' '(at3g19000 : 329.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G19010.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 256.0) no description available & (gnl|cdd|33294 : 203.0) no description available & (q05964|fl3h_diaca : 138.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 658.0) & (original description: Putative SAN1A, Description = Senescence-associated nodulin 1A, PFAM = PF03171;PF14226)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf03265_58134-64534' '(p49098|cyb5_tobac : 256.0) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (at2g32720 : 215.0) member of Cytochromes b5; cytochrome B5 isoform B (CB5-B); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform D (TAIR:AT5G48810.1); Has 4197 Blast hits to 4166 proteins in 470 species: Archae - 2; Bacteria - 26; Metazoa - 1028; Fungi - 1701; Plants - 800; Viruses - 3; Other Eukaryotes - 637 (source: NCBI BLink). & (gnl|cdd|35757 : 139.0) no description available & (gnl|cdd|84581 : 111.0) no description available & (reliability: 430.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf03488_929737-935650' '(p49098|cyb5_tobac : 125.0) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (at2g32720 : 124.0) member of Cytochromes b5; cytochrome B5 isoform B (CB5-B); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform D (TAIR:AT5G48810.1); Has 4197 Blast hits to 4166 proteins in 470 species: Archae - 2; Bacteria - 26; Metazoa - 1028; Fungi - 1701; Plants - 800; Viruses - 3; Other Eukaryotes - 637 (source: NCBI BLink). & (gnl|cdd|35757 : 107.0) no description available & (gnl|cdd|84581 : 96.5) no description available & (reliability: 248.0) & (original description: Putative At2g32720, Description = Cytochrome b5, PFAM = PF00173)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf03590_104512-107677' '(gnl|cdd|35365 : 194.0) no description available & (gnl|cdd|33294 : 136.0) no description available & (at5g08640 : 129.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o04847|dv4h_catro : 121.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 248.0) & (original description: Putative GA7ox1, Description = Flavonol synthase/flavanone 3-hydroxylase, PFAM = PF03171;PF14226)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf03590_173893-177150' '(gnl|cdd|35365 : 207.0) no description available & (gnl|cdd|33294 : 177.0) no description available & (at5g08640 : 138.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o48882|acco2_maldo : 128.0) 1-aminocyclopropane-1-carboxylate oxidase 2 (EC 1.14.17.4) (ACC oxidase 2) (Ethylene-forming enzyme) (EFE) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 274.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf04096_306385-310649' '(at5g52240 : 206.0) Encodes a protein with similarity to progesterone-binding proteins in animals. Has been shown to bind steroids in vitro. Expressed in aerial portions of the plant excluding mature flowers and siliques. Antisense experiments suggest a role in inhibition of hypocotyl cell elongation. Expression is suppressed light grown seedlings transferred to the dark.; membrane steroid binding protein 1 (MSBP1); CONTAINS InterPro DOMAIN/s: Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: membrane-associated progesterone binding protein 3 (TAIR:AT3G48890.1). & (gnl|cdd|36326 : 170.0) no description available & (reliability: 412.0) & (original description: Putative MSBP1, Description = Membrane steroid-binding protein 1, PFAM = PF00173)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf04117_98399-102659' '(at1g06620 : 314.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 312.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 275.0) no description available & (gnl|cdd|33294 : 158.0) no description available & (reliability: 628.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase isogeny 1, PFAM = PF14226;PF03171)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf04290_222702-226624' '(gnl|cdd|35365 : 213.0) no description available & (gnl|cdd|33294 : 174.0) no description available & (at2g30830 : 134.0) encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G30840.1); Has 8436 Blast hits to 8403 proteins in 1008 species: Archae - 0; Bacteria - 1171; Metazoa - 115; Fungi - 900; Plants - 4884; Viruses - 0; Other Eukaryotes - 1366 (source: NCBI BLink). & (q08506|acco1_pethy : 119.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 250.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf04406_392130-394459' '(at3g48890 : 129.0) putative progesterone-binding protein homolog (Atmp2) mRNA,; membrane-associated progesterone binding protein 3 (MAPR3); FUNCTIONS IN: heme binding; LOCATED IN: chloroplast thylakoid membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: membrane steroid binding protein 1 (TAIR:AT5G52240.1); Has 1079 Blast hits to 1069 proteins in 199 species: Archae - 0; Bacteria - 2; Metazoa - 428; Fungi - 337; Plants - 203; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative Os10g0502600, Description = Os10g0502600 protein, PFAM = )' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf04804_83778-88366' '(at4g25570 : 114.0) Encodes cytochrome b561.; ACYB-2; FUNCTIONS IN: carbon-monoxide oxygenase activity; LOCATED IN: integral to membrane, chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: cytochrome B561-1 (TAIR:AT5G38630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36832 : 84.1) no description available & (reliability: 228.0) & (original description: Putative ZCYB, Description = Cytochrome b561, PFAM = PF03188)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf04908_7814-18534' '(at1g06620 : 330.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 318.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 253.0) no description available & (gnl|cdd|33294 : 123.0) no description available & (reliability: 660.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase isogeny 1, PFAM = PF03171;PF03171)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf04908_15158-18296' '(at1g06620 : 187.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 162.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 97.4) no description available & (reliability: 374.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase isogeny 1, PFAM = PF14226)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf04995_1776168-1782529' '(gnl|cdd|35757 : 107.0) no description available & (at5g48810 : 101.0) Encodes a cytochrome b5 isoform that localizes to the ER. The C-terminal portion of the protein appears to be capable of inserting into a plant microsomal membrane in vitro and the protein appears to be subject to glycosylation.; cytochrome B5 isoform D (CB5-D); FUNCTIONS IN: heme binding; INVOLVED IN: defense response to bacterium; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform B (TAIR:AT2G32720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p49098|cyb5_tobac : 96.3) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84581 : 94.5) no description available & (reliability: 202.0) & (original description: Putative difF, Description = Cytochrome b5 DIF-F, PFAM = PF00173)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf05034_564531-568459' '(at3g48890 : 232.0) putative progesterone-binding protein homolog (Atmp2) mRNA,; membrane-associated progesterone binding protein 3 (MAPR3); FUNCTIONS IN: heme binding; LOCATED IN: chloroplast thylakoid membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: membrane steroid binding protein 1 (TAIR:AT5G52240.1); Has 1079 Blast hits to 1069 proteins in 199 species: Archae - 0; Bacteria - 2; Metazoa - 428; Fungi - 337; Plants - 203; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (gnl|cdd|36326 : 177.0) no description available & (reliability: 464.0) & (original description: Putative MSBP1, Description = Membrane-associated progesterone binding protein 5, PFAM = PF00173)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf05414_241114-252924' '(at1g26340 : 169.0) encodes a member of the cytochromes b5 family of proteins that localizes to the outer envelope of the chloroplast. The C-terminal portion of the protein appears to be capable of inserting into a plant microsomal membrane in vitro.; cytochrome B5 isoform A (CB5-A); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform B (TAIR:AT2G32720.1); Has 4207 Blast hits to 4178 proteins in 465 species: Archae - 2; Bacteria - 26; Metazoa - 1058; Fungi - 1672; Plants - 799; Viruses - 3; Other Eukaryotes - 647 (source: NCBI BLink). & (gnl|cdd|35757 : 123.0) no description available & (p49098|cyb5_tobac : 119.0) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84581 : 112.0) no description available & (reliability: 338.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf05582_333631-338134' '(p49099|cyb5s_tobac : 233.0) Cytochrome b5, seed isoform - Nicotiana tabacum (Common tobacco) & (at2g32720 : 200.0) member of Cytochromes b5; cytochrome B5 isoform B (CB5-B); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform D (TAIR:AT5G48810.1); Has 4197 Blast hits to 4166 proteins in 470 species: Archae - 2; Bacteria - 26; Metazoa - 1028; Fungi - 1701; Plants - 800; Viruses - 3; Other Eukaryotes - 637 (source: NCBI BLink). & (gnl|cdd|35757 : 125.0) no description available & (gnl|cdd|84581 : 101.0) no description available & (reliability: 400.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf05886_264629-273599' '(at2g32720 : 144.0) member of Cytochromes b5; cytochrome B5 isoform B (CB5-B); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform D (TAIR:AT5G48810.1); Has 4197 Blast hits to 4166 proteins in 470 species: Archae - 2; Bacteria - 26; Metazoa - 1028; Fungi - 1701; Plants - 800; Viruses - 3; Other Eukaryotes - 637 (source: NCBI BLink). & (p49100|cyb5_orysa : 141.0) Cytochrome b5 - Oryza sativa (Rice) & (gnl|cdd|35757 : 137.0) no description available & (gnl|cdd|84581 : 110.0) no description available & (reliability: 288.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf06078_374466-378001' '(gnl|cdd|35365 : 274.0) no description available & (at4g25420 : 206.0) Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light.; GA20OX1; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 20 oxidase 2 (TAIR:AT5G51810.1); Has 8544 Blast hits to 8501 proteins in 990 species: Archae - 0; Bacteria - 1084; Metazoa - 124; Fungi - 981; Plants - 4942; Viruses - 0; Other Eukaryotes - 1413 (source: NCBI BLink). & (o04707|gao1a_wheat : 200.0) Gibberellin 20 oxidase 1-A (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-A) (Ta20ox1A) (TaGA20ox1-A) - Triticum aestivum (Wheat) & (gnl|cdd|33294 : 193.0) no description available & (reliability: 382.0) & (original description: Putative RCOM_0191340, Description = Gibberellin 20 oxidase, putative, PFAM = PF14226;PF03171)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf06509_373106-386395' '(at1g60660 : 138.0) member of Cytochromes b5; cytochrome B5-like protein (CB5LP); FUNCTIONS IN: heme binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform A (TAIR:AT1G26340.1); Has 3645 Blast hits to 3620 proteins in 449 species: Archae - 2; Bacteria - 26; Metazoa - 975; Fungi - 1355; Plants - 764; Viruses - 0; Other Eukaryotes - 523 (source: NCBI BLink). & (gnl|cdd|35757 : 99.0) no description available & (gnl|cdd|84581 : 85.7) no description available & (reliability: 276.0) & (original description: Putative CB5LP, Description = Cytochrome B5-like protein, PFAM = PF00173)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf07115_34791-39547' '(gnl|cdd|35365 : 208.0) no description available & (gnl|cdd|33294 : 176.0) no description available & (at3g11180 : 139.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (q08506|acco1_pethy : 130.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (ACCO) - Petunia hybrida (Petunia) & (reliability: 264.0) & (original description: Putative glysoja_034856, Description = Gibberellin 2-beta-dioxygenase 8, PFAM = PF03171;PF14226)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf07678_809298-813139' '(at4g18260 : 192.0) Cytochrome b561/ferric reductase transmembrane protein family; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane protein family (TAIR:AT2G30890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47940 : 86.4) no description available & (reliability: 384.0) & (original description: Putative At2g30890, Description = Cytochrome b561 domain-containing protein At2g30890, PFAM = PF03188)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf07778_236483-243486' '(q42711|mdars_cucsa : 675.0) Monodehydroascorbate reductase, seedling isozyme (EC 1.6.5.4) (MDAR seedling) (Ascorbate free radical reductase seedling) (AFR reductase seedling) - Cucumis sativus (Cucumber) & (at3g52880 : 639.0) Encodes a peroxisomal monodehydroascorbate reductase, involved in the ascorbate-glutathione cycle which removes toxic H2O2; monodehydroascorbate reductase 1 (MDAR1); CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: Pyridine nucleotide-disulphide oxidoreductase family protein (TAIR:AT5G03630.1); Has 30852 Blast hits to 30793 proteins in 3038 species: Archae - 685; Bacteria - 24210; Metazoa - 865; Fungi - 584; Plants - 707; Viruses - 0; Other Eukaryotes - 3801 (source: NCBI BLink). & (gnl|cdd|36550 : 490.0) no description available & (gnl|cdd|87424 : 186.0) no description available & (reliability: 1278.0) & (original description: Putative AFRR, Description = Monodehydroascorbate reductase, PFAM = PF07992)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf07833_184590-188542' '(at1g06620 : 436.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 394.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 306.0) no description available & (gnl|cdd|33294 : 163.0) no description available & (reliability: 872.0) & (original description: Putative ACO3, Description = 1-aminocyclopropane-1-carboxylate oxidase homolog, PFAM = PF03171;PF14226)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf07987_132688-136577' '(at1g06620 : 413.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 380.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 283.0) no description available & (gnl|cdd|33294 : 153.0) no description available & (reliability: 826.0) & (original description: Putative p69RF, Description = 2OG-Fe(II) oxygenase family oxidoreductase, PFAM = PF14226;PF03171)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf08724_497483-501995' '(gnl|cdd|35365 : 209.0) no description available & (gnl|cdd|33294 : 168.0) no description available & (at3g11180 : 139.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). & (o04847|dv4h_catro : 122.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 268.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf09620_429389-438179' '(gnl|cdd|35757 : 133.0) no description available & (at2g32720 : 128.0) member of Cytochromes b5; cytochrome B5 isoform B (CB5-B); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform D (TAIR:AT5G48810.1); Has 4197 Blast hits to 4166 proteins in 470 species: Archae - 2; Bacteria - 26; Metazoa - 1028; Fungi - 1701; Plants - 800; Viruses - 3; Other Eukaryotes - 637 (source: NCBI BLink). & (p49100|cyb5_orysa : 125.0) Cytochrome b5 - Oryza sativa (Rice) & (gnl|cdd|84581 : 109.0) no description available & (reliability: 256.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf10671_31679-34844' '(gnl|cdd|35365 : 197.0) no description available & (gnl|cdd|33294 : 133.0) no description available & (at5g08640 : 128.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (o04847|dv4h_catro : 121.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 246.0) & (original description: Putative GA7ox1, Description = GA 7-oxidase, PFAM = PF14226;PF03171)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf13411_493036-505482' '(at4g14965 : 348.0) membrane-associated progesterone binding protein 4 (MAPR4); FUNCTIONS IN: heme binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: membrane-associated progesterone binding protein 2 (TAIR:AT2G24940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36324 : 245.0) no description available & (reliability: 696.0) & (original description: Putative MAPR4, Description = Membrane-associated progesterone-binding protein 4, PFAM = PF00173)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf13530_117406-123390' '(at5g38630 : 289.0) Encodes for cytochrome b561.; cytochrome B561-1 (CYB-1); FUNCTIONS IN: carbon-monoxide oxygenase activity; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane protein family (TAIR:AT4G25570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36832 : 210.0) no description available & (gnl|cdd|86268 : 127.0) no description available & (reliability: 578.0) & (original description: Putative CYB561B, Description = Probable transmembrane ascorbate ferrireductase 2, PFAM = PF03188)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf13856_54297-61046' '(at1g06620 : 448.0) encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (o04847|dv4h_catro : 391.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35365 : 308.0) no description available & (gnl|cdd|33294 : 169.0) no description available & (reliability: 896.0) & (original description: Putative p69RF, Description = 1-aminocyclopropane-1-carboxylate oxidase isogeny 1, PFAM = PF14226;PF03171)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf14308_2313-5822' '(p49098|cyb5_tobac : 125.0) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (at2g32720 : 122.0) member of Cytochromes b5; cytochrome B5 isoform B (CB5-B); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform D (TAIR:AT5G48810.1); Has 4197 Blast hits to 4166 proteins in 470 species: Archae - 2; Bacteria - 26; Metazoa - 1028; Fungi - 1701; Plants - 800; Viruses - 3; Other Eukaryotes - 637 (source: NCBI BLink). & (gnl|cdd|35757 : 108.0) no description available & (gnl|cdd|84581 : 98.4) no description available & (reliability: 244.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T '21.2' 'redox.ascorbate and glutathione' 'niben101scf16329_104177-110185' '(at4g18260 : 201.0) Cytochrome b561/ferric reductase transmembrane protein family; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane protein family (TAIR:AT2G30890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47940 : 84.5) no description available & (reliability: 402.0) & (original description: Putative Sb09g028600, Description = Putative uncharacterized protein Sb09g028600, PFAM = PF03188)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'nbv0.3scaffold1999_79115-83175' '(at4g39830 : 686.0) Cupredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, L-ascorbate oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117), L-ascorbate oxidase, plants (InterPro:IPR017760); BEST Arabidopsis thaliana protein match is: Plant L-ascorbate oxidase (TAIR:AT5G21100.1); Has 10346 Blast hits to 8779 proteins in 1558 species: Archae - 67; Bacteria - 4905; Metazoa - 456; Fungi - 3230; Plants - 1293; Viruses - 0; Other Eukaryotes - 395 (source: NCBI BLink). & (p24792|aso_cucma : 459.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|36477 : 358.0) no description available & (gnl|cdd|32315 : 134.0) no description available & (reliability: 1372.0) & (original description: Putative ao1, Description = L-ascorbate oxidase, PFAM = PF07732;PF00394;PF07731)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'nbv0.3scaffold6343_42406-51260' '(at4g35000 : 226.0) Encodes a microsomal ascorbate peroxidase APX3. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. The APX3 protein interacts with AKR2 (ankyrin-containing protein that interacts with AFT1) and AFT1, a 14-3-3 protein.; ascorbate peroxidase 3 (APX3); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: response to oxidative stress; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 5 (TAIR:AT4G35970.1); Has 9863 Blast hits to 8656 proteins in 1251 species: Archae - 86; Bacteria - 3261; Metazoa - 20; Fungi - 794; Plants - 3685; Viruses - 0; Other Eukaryotes - 2017 (source: NCBI BLink). & (q6ty83|apx3_orysa : 224.0) Probable L-ascorbate peroxidase 3 (EC 1.11.1.11) (OsAPx03) - Oryza sativa (Rice) & (gnl|cdd|29386 : 220.0) no description available & (reliability: 452.0) & (original description: Putative apx, Description = Ascorbate peroxidase, PFAM = PF00141)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'nbv0.3scaffold6866_532-5189' '(gnl|cdd|29386 : 400.0) no description available & (at1g07890 : 356.0) Encodes a cytosolic ascorbate peroxidase APX1. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. At least part of the induction of heat shock proteins during light stress in Arabidopsis is mediated by H2O2 that is scavenged by APX1. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.; ascorbate peroxidase 1 (APX1); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: response to reactive oxygen species, response to salt stress, response to heat, hydrogen peroxide catabolic process, embryo development ending in seed dormancy; LOCATED IN: cytosol, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 2 (TAIR:AT3G09640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9fe01|apx2_orysa : 352.0) L-ascorbate peroxidase 2, cytosolic (EC 1.11.1.11) (APXb) (OsAPx02) - Oryza sativa (Rice) & (reliability: 712.0) & (original description: Putative apx, Description = Ascorbate peroxidase, PFAM = PF00141)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'nbv0.3scaffold72641_1209-8707' '(at3g27820 : 706.0) Encodes a peroxisome membrane-bound monodehydroascorbate reductase, involved in the ascorbate-glutathione cycle which removes toxic H2O2; monodehydroascorbate reductase 4 (MDAR4); FUNCTIONS IN: monodehydroascorbate reductase (NADH) activity; INVOLVED IN: hydrogen peroxide catabolic process; LOCATED IN: peroxisomal membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: monodehydroascorbate reductase 1 (TAIR:AT3G52880.1); Has 27219 Blast hits to 27159 proteins in 2894 species: Archae - 579; Bacteria - 21951; Metazoa - 737; Fungi - 533; Plants - 600; Viruses - 0; Other Eukaryotes - 2819 (source: NCBI BLink). & (gnl|cdd|36550 : 470.0) no description available & (q40977|mdar_pea : 457.0) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR) (Ascorbate free radical reductase) (AFR reductase) - Pisum sativum (Garden pea) & (gnl|cdd|87424 : 182.0) no description available & (reliability: 1412.0) & (original description: Putative MDAR4, Description = Monodehydroascorbate reductase 4, peroxisomal, PFAM = PF07992)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'nbv0.5scaffold1001_81726-159272' '(at1g75270 : 162.0) dehydroascorbate reductase 2 (DHAR2); FUNCTIONS IN: glutathione binding, glutathione dehydrogenase (ascorbate) activity; INVOLVED IN: protein amino acid glutathionylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: dehydroascorbate reductase (TAIR:AT1G19570.1); Has 4940 Blast hits to 4851 proteins in 1062 species: Archae - 0; Bacteria - 1874; Metazoa - 1090; Fungi - 227; Plants - 921; Viruses - 0; Other Eukaryotes - 828 (source: NCBI BLink). & (gnl|cdd|36636 : 127.0) no description available & (reliability: 324.0) & (original description: Putative DHAR, Description = Dehydroascorbate reductase, PFAM = PF13417)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben044scf00001192ctg003_25725-31918' '(at4g09010 : 424.0) Encodes a protein that was initially believed to act as a microsomal ascorbate peroxidase APX4 but to date, no evidence of enzymatic activity has been found.; ascorbate peroxidase 4 (APX4); FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 5 (TAIR:AT4G35970.1); Has 1182 Blast hits to 1180 proteins in 264 species: Archae - 20; Bacteria - 119; Metazoa - 0; Fungi - 348; Plants - 604; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|29386 : 83.4) no description available & (reliability: 848.0) & (original description: Putative apx, Description = Thylakoid lumenal 29 kDa protein, chloroplastic, PFAM = PF00141)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben044scf00009732ctg014_257-6558' '(q42711|mdars_cucsa : 674.0) Monodehydroascorbate reductase, seedling isozyme (EC 1.6.5.4) (MDAR seedling) (Ascorbate free radical reductase seedling) (AFR reductase seedling) - Cucumis sativus (Cucumber) & (at3g52880 : 643.0) Encodes a peroxisomal monodehydroascorbate reductase, involved in the ascorbate-glutathione cycle which removes toxic H2O2; monodehydroascorbate reductase 1 (MDAR1); CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: Pyridine nucleotide-disulphide oxidoreductase family protein (TAIR:AT5G03630.1); Has 30852 Blast hits to 30793 proteins in 3038 species: Archae - 685; Bacteria - 24210; Metazoa - 865; Fungi - 584; Plants - 707; Viruses - 0; Other Eukaryotes - 3801 (source: NCBI BLink). & (gnl|cdd|36550 : 492.0) no description available & (gnl|cdd|87424 : 183.0) no description available & (reliability: 1238.0) & (original description: Putative AFRR, Description = Monodehydroascorbate reductase, PFAM = PF07992)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben044scf00023324ctg002_2969-10964' '(at3g27820 : 706.0) Encodes a peroxisome membrane-bound monodehydroascorbate reductase, involved in the ascorbate-glutathione cycle which removes toxic H2O2; monodehydroascorbate reductase 4 (MDAR4); FUNCTIONS IN: monodehydroascorbate reductase (NADH) activity; INVOLVED IN: hydrogen peroxide catabolic process; LOCATED IN: peroxisomal membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: monodehydroascorbate reductase 1 (TAIR:AT3G52880.1); Has 27219 Blast hits to 27159 proteins in 2894 species: Archae - 579; Bacteria - 21951; Metazoa - 737; Fungi - 533; Plants - 600; Viruses - 0; Other Eukaryotes - 2819 (source: NCBI BLink). & (gnl|cdd|36550 : 465.0) no description available & (q40977|mdar_pea : 450.0) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR) (Ascorbate free radical reductase) (AFR reductase) - Pisum sativum (Garden pea) & (gnl|cdd|87424 : 180.0) no description available & (reliability: 1412.0) & (original description: Putative MDAR4, Description = Monodehydroascorbate reductase 4, peroxisomal, PFAM = PF07992)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf00421_96494-107015' '(at1g63940 : 739.0) monodehydroascorbate reductase 6 (MDAR6); FUNCTIONS IN: ATP binding; INVOLVED IN: response to cadmium ion, response to cold; LOCATED IN: mitochondrion, stromule, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: monodehydroascorbate reductase 1 (TAIR:AT3G52880.1); Has 32339 Blast hits to 32274 proteins in 3053 species: Archae - 745; Bacteria - 25255; Metazoa - 989; Fungi - 665; Plants - 640; Viruses - 0; Other Eukaryotes - 4045 (source: NCBI BLink). & (gnl|cdd|36550 : 463.0) no description available & (q40977|mdar_pea : 360.0) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR) (Ascorbate free radical reductase) (AFR reductase) - Pisum sativum (Garden pea) & (gnl|cdd|87424 : 196.0) no description available & (reliability: 1478.0) & (original description: Putative MDAR5, Description = Monodehydroascorbate reductase 5, mitochondrial, PFAM = PF07992)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf01166_926905-945167' '(at1g77490 : 585.0) Encodes a chloroplastic thylakoid ascorbate peroxidase tAPX. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.; thylakoidal ascorbate peroxidase (TAPX); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: stromal ascorbate peroxidase (TAIR:AT4G08390.2); Has 7809 Blast hits to 7730 proteins in 1256 species: Archae - 55; Bacteria - 2313; Metazoa - 5; Fungi - 620; Plants - 3345; Viruses - 0; Other Eukaryotes - 1471 (source: NCBI BLink). & (q69sv0|apx8_orysa : 543.0) Probable L-ascorbate peroxidase 8, chloroplast precursor (EC 1.11.1.11) (OsAPx08) - Oryza sativa (Rice) & (gnl|cdd|29386 : 366.0) no description available & (reliability: 1170.0) & (original description: Putative pAPX, Description = Chloroplast ascorbate peroxidase, PFAM = PF00141)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf01664_157417-167529' '(at4g35000 : 187.0) Encodes a microsomal ascorbate peroxidase APX3. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. The APX3 protein interacts with AKR2 (ankyrin-containing protein that interacts with AFT1) and AFT1, a 14-3-3 protein.; ascorbate peroxidase 3 (APX3); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: response to oxidative stress; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 5 (TAIR:AT4G35970.1); Has 9863 Blast hits to 8656 proteins in 1251 species: Archae - 86; Bacteria - 3261; Metazoa - 20; Fungi - 794; Plants - 3685; Viruses - 0; Other Eukaryotes - 2017 (source: NCBI BLink). & (q6ty83|apx3_orysa : 184.0) Probable L-ascorbate peroxidase 3 (EC 1.11.1.11) (OsAPx03) - Oryza sativa (Rice) & (gnl|cdd|29386 : 178.0) no description available & (reliability: 374.0) & (original description: Putative gAPX, Description = Ascorbate peroxidase, PFAM = PF00141)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf01799_307495-313164' '(at5g16710 : 362.0) The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; dehydroascorbate reductase 1 (DHAR3); FUNCTIONS IN: glutathione dehydrogenase (ascorbate) activity; INVOLVED IN: protein amino acid glutathionylation; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: dehydroascorbate reductase 2 (TAIR:AT1G75270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36636 : 253.0) no description available & (gnl|cdd|48128 : 217.0) no description available & (reliability: 724.0) & (original description: Putative DHAR3, Description = Glutathione S-transferase DHAR3, chloroplastic, PFAM = PF13417)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf02367_648792-654786' '(at4g09010 : 418.0) Encodes a protein that was initially believed to act as a microsomal ascorbate peroxidase APX4 but to date, no evidence of enzymatic activity has been found.; ascorbate peroxidase 4 (APX4); FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 5 (TAIR:AT4G35970.1); Has 1182 Blast hits to 1180 proteins in 264 species: Archae - 20; Bacteria - 119; Metazoa - 0; Fungi - 348; Plants - 604; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|29386 : 85.3) no description available & (reliability: 836.0) & (original description: Putative apx, Description = Ascorbate peroxidase, PFAM = PF00141)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf02537_247766-257351' '(at4g09010 : 439.0) Encodes a protein that was initially believed to act as a microsomal ascorbate peroxidase APX4 but to date, no evidence of enzymatic activity has been found.; ascorbate peroxidase 4 (APX4); FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 5 (TAIR:AT4G35970.1); Has 1182 Blast hits to 1180 proteins in 264 species: Archae - 20; Bacteria - 119; Metazoa - 0; Fungi - 348; Plants - 604; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|29386 : 83.0) no description available & (reliability: 878.0) & (original description: Putative apx, Description = Thylakoid lumenal 29 kDa protein, chloroplastic, PFAM = PF00141)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf03026_126031-130269' '(at4g39830 : 827.0) Cupredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, L-ascorbate oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117), L-ascorbate oxidase, plants (InterPro:IPR017760); BEST Arabidopsis thaliana protein match is: Plant L-ascorbate oxidase (TAIR:AT5G21100.1); Has 10346 Blast hits to 8779 proteins in 1558 species: Archae - 67; Bacteria - 4905; Metazoa - 456; Fungi - 3230; Plants - 1293; Viruses - 0; Other Eukaryotes - 395 (source: NCBI BLink). & (p24792|aso_cucma : 586.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|36477 : 442.0) no description available & (gnl|cdd|32315 : 174.0) no description available & (reliability: 1654.0) & (original description: Putative ao1, Description = L-ascorbate oxidase, PFAM = PF07731;PF07732;PF00394)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf03483_33945-49267' '(q40588|aso_tobac : 1104.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Nicotiana tabacum (Common tobacco) & (at5g21105 : 773.0) Plant L-ascorbate oxidase; FUNCTIONS IN: oxidoreductase activity, L-ascorbate oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), L-ascorbate oxidase, plants (InterPro:IPR017760), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Plant L-ascorbate oxidase (TAIR:AT5G21100.1). & (gnl|cdd|36477 : 443.0) no description available & (gnl|cdd|32315 : 182.0) no description available & (reliability: 1546.0) & (original description: Putative AAO, Description = L-ascorbate oxidase, PFAM = PF00394;PF07732;PF07731)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf03804_90037-99075' '(at1g77490 : 592.0) Encodes a chloroplastic thylakoid ascorbate peroxidase tAPX. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.; thylakoidal ascorbate peroxidase (TAPX); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: stromal ascorbate peroxidase (TAIR:AT4G08390.2); Has 7809 Blast hits to 7730 proteins in 1256 species: Archae - 55; Bacteria - 2313; Metazoa - 5; Fungi - 620; Plants - 3345; Viruses - 0; Other Eukaryotes - 1471 (source: NCBI BLink). & (q69sv0|apx8_orysa : 551.0) Probable L-ascorbate peroxidase 8, chloroplast precursor (EC 1.11.1.11) (OsAPx08) - Oryza sativa (Rice) & (gnl|cdd|29386 : 368.0) no description available & (reliability: 1184.0) & (original description: Putative APXT, Description = L-ascorbate peroxidase T, chloroplastic, PFAM = PF00141)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf05710_223034-230112' '(at4g35000 : 444.0) Encodes a microsomal ascorbate peroxidase APX3. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. The APX3 protein interacts with AKR2 (ankyrin-containing protein that interacts with AFT1) and AFT1, a 14-3-3 protein.; ascorbate peroxidase 3 (APX3); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: response to oxidative stress; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 5 (TAIR:AT4G35970.1); Has 9863 Blast hits to 8656 proteins in 1251 species: Archae - 86; Bacteria - 3261; Metazoa - 20; Fungi - 794; Plants - 3685; Viruses - 0; Other Eukaryotes - 2017 (source: NCBI BLink). & (gnl|cdd|29386 : 404.0) no description available & (q6zjj1|apx4_orysa : 391.0) Probable L-ascorbate peroxidase 4 (EC 1.11.1.11) (OsAPx04) - Oryza sativa (Rice) & (reliability: 888.0) & (original description: Putative gAPX, Description = Ascorbate peroxidase, PFAM = PF00141)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf06195_736-5114' '(at1g07890 : 408.0) Encodes a cytosolic ascorbate peroxidase APX1. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. At least part of the induction of heat shock proteins during light stress in Arabidopsis is mediated by H2O2 that is scavenged by APX1. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.; ascorbate peroxidase 1 (APX1); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: response to reactive oxygen species, response to salt stress, response to heat, hydrogen peroxide catabolic process, embryo development ending in seed dormancy; LOCATED IN: cytosol, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 2 (TAIR:AT3G09640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9fe01|apx2_orysa : 403.0) L-ascorbate peroxidase 2, cytosolic (EC 1.11.1.11) (APXb) (OsAPx02) - Oryza sativa (Rice) & (gnl|cdd|29386 : 402.0) no description available & (reliability: 816.0) & (original description: Putative apx, Description = Ascorbate peroxidase, PFAM = PF00141)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf07050_57830-63755' '(gnl|cdd|29386 : 408.0) no description available & (at3g09640 : 401.0) Encodes a cytosolic ascorbate peroxidase APX2. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.; ascorbate peroxidase 2 (APX2); CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 1 (TAIR:AT1G07890.8); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9fe01|apx2_orysa : 390.0) L-ascorbate peroxidase 2, cytosolic (EC 1.11.1.11) (APXb) (OsAPx02) - Oryza sativa (Rice) & (reliability: 802.0) & (original description: Putative APX2, Description = L-ascorbate peroxidase 2, cytosolic, PFAM = PF00141)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf07109_92989-108041' '(at4g35000 : 435.0) Encodes a microsomal ascorbate peroxidase APX3. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. The APX3 protein interacts with AKR2 (ankyrin-containing protein that interacts with AFT1) and AFT1, a 14-3-3 protein.; ascorbate peroxidase 3 (APX3); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: response to oxidative stress; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 5 (TAIR:AT4G35970.1); Has 9863 Blast hits to 8656 proteins in 1251 species: Archae - 86; Bacteria - 3261; Metazoa - 20; Fungi - 794; Plants - 3685; Viruses - 0; Other Eukaryotes - 2017 (source: NCBI BLink). & (gnl|cdd|29386 : 400.0) no description available & (q6zjj1|apx4_orysa : 383.0) Probable L-ascorbate peroxidase 4 (EC 1.11.1.11) (OsAPx04) - Oryza sativa (Rice) & (reliability: 870.0) & (original description: Putative APX, Description = Ascorbate peroxidase, PFAM = PF00141)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf07250_273897-280914' '(at4g35000 : 432.0) Encodes a microsomal ascorbate peroxidase APX3. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. The APX3 protein interacts with AKR2 (ankyrin-containing protein that interacts with AFT1) and AFT1, a 14-3-3 protein.; ascorbate peroxidase 3 (APX3); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: response to oxidative stress; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 5 (TAIR:AT4G35970.1); Has 9863 Blast hits to 8656 proteins in 1251 species: Archae - 86; Bacteria - 3261; Metazoa - 20; Fungi - 794; Plants - 3685; Viruses - 0; Other Eukaryotes - 2017 (source: NCBI BLink). & (q6ty83|apx3_orysa : 423.0) Probable L-ascorbate peroxidase 3 (EC 1.11.1.11) (OsAPx03) - Oryza sativa (Rice) & (gnl|cdd|29386 : 400.0) no description available & (reliability: 864.0) & (original description: Putative APX3, Description = Probable L-ascorbate peroxidase 3, PFAM = PF00141)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf07778_236483-243486' '(q42711|mdars_cucsa : 675.0) Monodehydroascorbate reductase, seedling isozyme (EC 1.6.5.4) (MDAR seedling) (Ascorbate free radical reductase seedling) (AFR reductase seedling) - Cucumis sativus (Cucumber) & (at3g52880 : 639.0) Encodes a peroxisomal monodehydroascorbate reductase, involved in the ascorbate-glutathione cycle which removes toxic H2O2; monodehydroascorbate reductase 1 (MDAR1); CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: Pyridine nucleotide-disulphide oxidoreductase family protein (TAIR:AT5G03630.1); Has 30852 Blast hits to 30793 proteins in 3038 species: Archae - 685; Bacteria - 24210; Metazoa - 865; Fungi - 584; Plants - 707; Viruses - 0; Other Eukaryotes - 3801 (source: NCBI BLink). & (gnl|cdd|36550 : 490.0) no description available & (gnl|cdd|87424 : 186.0) no description available & (reliability: 1226.0) & (original description: Putative AFRR, Description = Monodehydroascorbate reductase, PFAM = PF07992)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf09004_148998-168013' '(q40588|aso_tobac : 782.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Nicotiana tabacum (Common tobacco) & (at5g21105 : 657.0) Plant L-ascorbate oxidase; FUNCTIONS IN: oxidoreductase activity, L-ascorbate oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), L-ascorbate oxidase, plants (InterPro:IPR017760), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Plant L-ascorbate oxidase (TAIR:AT5G21100.1). & (gnl|cdd|36477 : 356.0) no description available & (gnl|cdd|84744 : 136.0) no description available & (reliability: 1314.0) & (original description: Putative AAO, Description = L-ascorbate oxidase, PFAM = PF00394;PF07732;PF07731)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf10015_876948-882991' '(at1g75270 : 319.0) dehydroascorbate reductase 2 (DHAR2); FUNCTIONS IN: glutathione binding, glutathione dehydrogenase (ascorbate) activity; INVOLVED IN: protein amino acid glutathionylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: dehydroascorbate reductase (TAIR:AT1G19570.1); Has 4940 Blast hits to 4851 proteins in 1062 species: Archae - 0; Bacteria - 1874; Metazoa - 1090; Fungi - 227; Plants - 921; Viruses - 0; Other Eukaryotes - 828 (source: NCBI BLink). & (gnl|cdd|36636 : 258.0) no description available & (gnl|cdd|48128 : 215.0) no description available & (reliability: 638.0) & (original description: Putative DHAR2, Description = Glutathione S-transferase DHAR2, PFAM = PF13417)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf10468_107992-113876' '(at5g16710 : 355.0) The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; dehydroascorbate reductase 1 (DHAR3); FUNCTIONS IN: glutathione dehydrogenase (ascorbate) activity; INVOLVED IN: protein amino acid glutathionylation; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: dehydroascorbate reductase 2 (TAIR:AT1G75270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36636 : 251.0) no description available & (gnl|cdd|48128 : 210.0) no description available & (reliability: 710.0) & (original description: Putative DHAR3, Description = Glutathione S-transferase DHAR3, chloroplastic, PFAM = PF13417)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf13259_124275-129282' '(gnl|cdd|29386 : 401.0) no description available & (at1g07890 : 378.0) Encodes a cytosolic ascorbate peroxidase APX1. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. At least part of the induction of heat shock proteins during light stress in Arabidopsis is mediated by H2O2 that is scavenged by APX1. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.; ascorbate peroxidase 1 (APX1); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: response to reactive oxygen species, response to salt stress, response to heat, hydrogen peroxide catabolic process, embryo development ending in seed dormancy; LOCATED IN: cytosol, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 2 (TAIR:AT3G09640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9fe01|apx2_orysa : 367.0) L-ascorbate peroxidase 2, cytosolic (EC 1.11.1.11) (APXb) (OsAPx02) - Oryza sativa (Rice) & (reliability: 756.0) & (original description: Putative APX1, Description = L-ascorbate peroxidase 1, cytosolic, PFAM = PF00141)' T '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'niben101scf30418_78759-87803' '(at1g75270 : 315.0) dehydroascorbate reductase 2 (DHAR2); FUNCTIONS IN: glutathione binding, glutathione dehydrogenase (ascorbate) activity; INVOLVED IN: protein amino acid glutathionylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: dehydroascorbate reductase (TAIR:AT1G19570.1); Has 4940 Blast hits to 4851 proteins in 1062 species: Archae - 0; Bacteria - 1874; Metazoa - 1090; Fungi - 227; Plants - 921; Viruses - 0; Other Eukaryotes - 828 (source: NCBI BLink). & (gnl|cdd|36636 : 256.0) no description available & (gnl|cdd|48128 : 210.0) no description available & (reliability: 630.0) & (original description: Putative DHAR1, Description = Glutathione S-transferase DHAR1, mitochondrial, PFAM = PF13410;PF13417)' T '21.2.1.1' 'redox.ascorbate and glutathione.ascorbate.GME' 'niben101scf01696_637076-641002' '(q338b5|gme1_orysa : 737.0) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man 3,5-epimerase 1) (OsGME-1) - Oryza sativa (Rice) & (at5g28840 : 725.0) Encodes a protein with GDP-D-mannose 3',5'-epimerase activity. The enzyme is involved in ascorbate biosynthesis. It catalyzes the conversion of GDP-D-mannose to GDP-L-galactose.; "GDP-D-mannose 3',5'-epimerase" (GME); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G62830.2). & (gnl|cdd|36642 : 444.0) no description available & (gnl|cdd|30800 : 182.0) no description available & (reliability: 1450.0) & (original description: Putative blmG, Description = NAD-dependent dehydratase, PFAM = PF01370)' T '21.2.1.1' 'redox.ascorbate and glutathione.ascorbate.GME' 'niben101scf05381_167345-171981' '(q338b5|gme1_orysa : 720.0) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man 3,5-epimerase 1) (OsGME-1) - Oryza sativa (Rice) & (at5g28840 : 712.0) Encodes a protein with GDP-D-mannose 3',5'-epimerase activity. The enzyme is involved in ascorbate biosynthesis. It catalyzes the conversion of GDP-D-mannose to GDP-L-galactose.; "GDP-D-mannose 3',5'-epimerase" (GME); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G62830.2). & (gnl|cdd|36642 : 456.0) no description available & (gnl|cdd|30800 : 177.0) no description available & (reliability: 1424.0) & (original description: Putative blmG, Description = NAD-dependent dehydratase, PFAM = PF01370)' T '21.2.1.1' 'redox.ascorbate and glutathione.ascorbate.GME' 'niben101scf30320_761-4100' '(q338b5|gme1_orysa : 444.0) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man 3,5-epimerase 1) (OsGME-1) - Oryza sativa (Rice) & (at5g28840 : 436.0) Encodes a protein with GDP-D-mannose 3',5'-epimerase activity. The enzyme is involved in ascorbate biosynthesis. It catalyzes the conversion of GDP-D-mannose to GDP-L-galactose.; "GDP-D-mannose 3',5'-epimerase" (GME); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G62830.2). & (gnl|cdd|36642 : 275.0) no description available & (gnl|cdd|85412 : 126.0) no description available & (reliability: 872.0) & (original description: Putative GME, Description = GDP-D-mannose-3 5-epimerase, PFAM = PF01370)' T '21.2.1.2' 'redox.ascorbate and glutathione.ascorbate.GDP-L-galactose-hexose-1-phosphate guanyltransferase' 'nbv0.3scaffold6661_5654-11416' '(at4g26850 : 518.0) Encodes a novel protein involved in ascorbate biosynthesis, which was shown to catalyze the transfer of GMP from GDP-galactose to a variety of hexose-1-phosphate acceptors. Recessive mutation has a reduced amount of vitamin C, lower level of non-photochemical quenching, and reduced rate of conversion of violaxanthin to zeaxanthin in high light.; vitamin c defective 2 (VTC2); FUNCTIONS IN: in 8 functions; INVOLVED IN: response to jasmonic acid stimulus, L-ascorbic acid biosynthetic process, defense response to bacterium, response to heat, defense response by callose deposition in cell wall; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: galactose-1-phosphate guanylyltransferase (GDP)s;GDP-D-glucose phosphorylases;quercetin 4'-O-glucosyltransferases (TAIR:AT5G55120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37931 : 402.0) no description available & (reliability: 1036.0) & (original description: Putative VTC2, Description = GDP-L-galactose phosphorylase 1, PFAM = )' T '21.2.1.2' 'redox.ascorbate and glutathione.ascorbate.GDP-L-galactose-hexose-1-phosphate guanyltransferase' 'niben101scf00069_1544140-1549902' '(at4g26850 : 491.0) Encodes a novel protein involved in ascorbate biosynthesis, which was shown to catalyze the transfer of GMP from GDP-galactose to a variety of hexose-1-phosphate acceptors. Recessive mutation has a reduced amount of vitamin C, lower level of non-photochemical quenching, and reduced rate of conversion of violaxanthin to zeaxanthin in high light.; vitamin c defective 2 (VTC2); FUNCTIONS IN: in 8 functions; INVOLVED IN: response to jasmonic acid stimulus, L-ascorbic acid biosynthetic process, defense response to bacterium, response to heat, defense response by callose deposition in cell wall; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: galactose-1-phosphate guanylyltransferase (GDP)s;GDP-D-glucose phosphorylases;quercetin 4'-O-glucosyltransferases (TAIR:AT5G55120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37931 : 383.0) no description available & (reliability: 982.0) & (original description: Putative GGP, Description = GDP-L-galactose phosphorylase, PFAM = )' T '21.2.1.2' 'redox.ascorbate and glutathione.ascorbate.GDP-L-galactose-hexose-1-phosphate guanyltransferase' 'niben101scf00161_584655-589337' '(at4g26850 : 607.0) Encodes a novel protein involved in ascorbate biosynthesis, which was shown to catalyze the transfer of GMP from GDP-galactose to a variety of hexose-1-phosphate acceptors. Recessive mutation has a reduced amount of vitamin C, lower level of non-photochemical quenching, and reduced rate of conversion of violaxanthin to zeaxanthin in high light.; vitamin c defective 2 (VTC2); FUNCTIONS IN: in 8 functions; INVOLVED IN: response to jasmonic acid stimulus, L-ascorbic acid biosynthetic process, defense response to bacterium, response to heat, defense response by callose deposition in cell wall; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: galactose-1-phosphate guanylyltransferase (GDP)s;GDP-D-glucose phosphorylases;quercetin 4'-O-glucosyltransferases (TAIR:AT5G55120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37931 : 494.0) no description available & (reliability: 1214.0) & (original description: Putative VTC2, Description = GDP-L-galactose phosphorylase 1, PFAM = )' T '21.2.1.2' 'redox.ascorbate and glutathione.ascorbate.GDP-L-galactose-hexose-1-phosphate guanyltransferase' 'niben101scf08035_93324-102125' '(at5g55120 : 526.0) Encodes a GDP-L-galactose phosphorylase, with similar biochemical properties as VTC2.; VITAMIN C DEFECTIVE 5 (VTC5); BEST Arabidopsis thaliana protein match is: mannose-1-phosphate guanylyltransferase (GDP)s;GDP-galactose:mannose-1-phosphate guanylyltransferases;GDP-galactose:glucose-1-phosphate guanylyltransferases;GDP-galactose:myoinositol-1-phosphate guanylyltransferases;glucose-1-phosphate guanylyltransferase (GDP)s;galactose-1-phosphate guanylyltransferase (GDP)s;GDP-D-glucose phosphorylases;quercetin 4'-O-glucosyltransferases (TAIR:AT4G26850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37931 : 408.0) no description available & (reliability: 1052.0) & (original description: Putative GGP, Description = GDP-L-galactose phosphorylase, PFAM = )' T '21.2.1.2' 'redox.ascorbate and glutathione.ascorbate.GDP-L-galactose-hexose-1-phosphate guanyltransferase' 'niben101scf09436_177091-182044' '(at4g26850 : 620.0) Encodes a novel protein involved in ascorbate biosynthesis, which was shown to catalyze the transfer of GMP from GDP-galactose to a variety of hexose-1-phosphate acceptors. Recessive mutation has a reduced amount of vitamin C, lower level of non-photochemical quenching, and reduced rate of conversion of violaxanthin to zeaxanthin in high light.; vitamin c defective 2 (VTC2); FUNCTIONS IN: in 8 functions; INVOLVED IN: response to jasmonic acid stimulus, L-ascorbic acid biosynthetic process, defense response to bacterium, response to heat, defense response by callose deposition in cell wall; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: galactose-1-phosphate guanylyltransferase (GDP)s;GDP-D-glucose phosphorylases;quercetin 4'-O-glucosyltransferases (TAIR:AT5G55120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37931 : 487.0) no description available & (reliability: 1240.0) & (original description: Putative VTC2, Description = GDP-L-galactose phosphorylase 1, PFAM = )' T '21.2.1.3' 'redox.ascorbate and glutathione.ascorbate.L-galactose-1-phosphate phosphatase' 'nbv0.3scaffold43030_7621-18023' '(at3g02870 : 407.0) Encodes a L-galactose-1-phosphate phosphatase, involved in ascorbate biosynthesis.; VTC4; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, L-galactose-1-phosphate phosphatase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process, L-ascorbic acid biosynthetic process, response to karrikin, response to cold, inositol biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, Lithium-sensitive (InterPro:IPR020552), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: myo-inositol monophosphatase like 1 (TAIR:AT1G31190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o49071|impp_mescr : 400.0) Inositol monophosphatase (EC 3.1.3.25) (IMPase) (IMP) (Inositol-1(or 4)-monophosphatase) - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|38162 : 329.0) no description available & (gnl|cdd|30137 : 312.0) no description available & (reliability: 814.0) & (original description: Putative IMP3, Description = Inositol monophosphatase 3, PFAM = PF00459)' T '21.2.1.3' 'redox.ascorbate and glutathione.ascorbate.L-galactose-1-phosphate phosphatase' 'niben101scf00303_22447-29852' '(at3g02870 : 412.0) Encodes a L-galactose-1-phosphate phosphatase, involved in ascorbate biosynthesis.; VTC4; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, L-galactose-1-phosphate phosphatase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process, L-ascorbic acid biosynthetic process, response to karrikin, response to cold, inositol biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, Lithium-sensitive (InterPro:IPR020552), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: myo-inositol monophosphatase like 1 (TAIR:AT1G31190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o49071|impp_mescr : 405.0) Inositol monophosphatase (EC 3.1.3.25) (IMPase) (IMP) (Inositol-1(or 4)-monophosphatase) - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|38162 : 332.0) no description available & (gnl|cdd|30137 : 316.0) no description available & (reliability: 824.0) & (original description: Putative IMP3, Description = Inositol monophosphatase 3, PFAM = PF00459)' T '21.2.1.4' 'redox.ascorbate and glutathione.ascorbate.L-galactose dehydrogenase' 'niben044scf00016215ctg013_1201-5436' '(at4g33670 : 516.0) Encodes a L-galactose dehydrogenase, involved in ascorbate biosynthesis; NAD(P)-linked oxidoreductase superfamily protein; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60750.1); Has 28637 Blast hits to 28630 proteins in 2499 species: Archae - 653; Bacteria - 20546; Metazoa - 1049; Fungi - 1796; Plants - 827; Viruses - 0; Other Eukaryotes - 3766 (source: NCBI BLink). & (gnl|cdd|36789 : 403.0) no description available & (gnl|cdd|31011 : 207.0) no description available & (q40648|kcab_orysa : 92.8) Probable voltage-gated potassium channel subunit beta (K(+) channel subunit beta) - Oryza sativa (Rice) & (reliability: 1032.0) & (original description: Putative LGALDH, Description = L-galactose dehydrogenase, PFAM = PF00248)' T '21.2.1.4' 'redox.ascorbate and glutathione.ascorbate.L-galactose dehydrogenase' 'niben101scf07365_73033-77867' '(at4g33670 : 516.0) Encodes a L-galactose dehydrogenase, involved in ascorbate biosynthesis; NAD(P)-linked oxidoreductase superfamily protein; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60750.1); Has 28637 Blast hits to 28630 proteins in 2499 species: Archae - 653; Bacteria - 20546; Metazoa - 1049; Fungi - 1796; Plants - 827; Viruses - 0; Other Eukaryotes - 3766 (source: NCBI BLink). & (gnl|cdd|36789 : 401.0) no description available & (gnl|cdd|31011 : 206.0) no description available & (q40648|kcab_orysa : 93.6) Probable voltage-gated potassium channel subunit beta (K(+) channel subunit beta) - Oryza sativa (Rice) & (reliability: 1032.0) & (original description: Putative LGALDH, Description = L-galactose dehydrogenase, PFAM = PF00248)' T '21.2.1.5' 'redox.ascorbate and glutathione.ascorbate.L-Galactono-1,4-lactone dehydrogenase' 'niben044scf00023329ctg023_1-14247' '(at3g47930 : 909.0) L-Galactono-1,4-lactone dehydrogenase, catalyzes the final step of ascorbate biosynthesis; "L-galactono-1,4-lactone dehydrogenase" (GLDH); CONTAINS InterPro DOMAIN/s: D-arabinono-1,4-lactone oxidase (InterPro:IPR007173), FAD-binding, type 2 (InterPro:IPR016166), Galactonolactone dehydrogenase (InterPro:IPR010029), Actin-binding FH2 (InterPro:IPR015425), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: D-arabinono-1,4-lactone oxidase family protein (TAIR:AT5G56490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39928 : 451.0) no description available & (gnl|cdd|30625 : 109.0) no description available & (reliability: 1818.0) & (original description: Putative gldh, Description = L-galactono-1,4-lactone dehydrogenase, PFAM = PF01565;PF04030)' T '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'nbv0.3scaffold6998_42664-50066' '(p80461|gshrp_tobac : 859.0) Glutathione reductase, chloroplast precursor (EC 1.8.1.7) (GR) (GRase) (Fragment) - Nicotiana tabacum (Common tobacco) & (at3g54660 : 513.0) Encodes glutathione reductase that is most likely localized in the chloroplast.; glutathione reductase (GR); FUNCTIONS IN: glutathione-disulfide reductase activity, copper ion binding, ATP binding; INVOLVED IN: glutathione metabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Glutathione-disulphide reductase (InterPro:IPR006324), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099); BEST Arabidopsis thaliana protein match is: glutathione-disulfide reductase (TAIR:AT3G24170.3); Has 33740 Blast hits to 33692 proteins in 3140 species: Archae - 759; Bacteria - 24408; Metazoa - 813; Fungi - 438; Plants - 579; Viruses - 0; Other Eukaryotes - 6743 (source: NCBI BLink). & (gnl|cdd|35626 : 375.0) no description available & (gnl|cdd|81850 : 353.0) no description available & (reliability: 1026.0) & (original description: Putative cGR, Description = Glutathione reductase, PFAM = PF07992;PF02852)' T '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'nbv0.3scaffold26992_17140-22873' '(at5g37830 : 2141.0) Encodes a 5-oxoprolinase that acts in the glutathione degradation pathway and in 5-oxoproline metabolism.; oxoprolinase 1 (OXP1); CONTAINS InterPro DOMAIN/s: Hydantoinase B/oxoprolinase (InterPro:IPR003692), Hydantoinase/oxoprolinase (InterPro:IPR002821), Hydantoinaseoxoprolinase, N-terminal (InterPro:IPR008040); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37150 : 1908.0) no description available & (gnl|cdd|30495 : 629.0) no description available & (reliability: 4282.0) & (original description: Putative oplah, Description = 5-oxoprolinase, PFAM = PF05378;PF01968;PF02538)' T '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'nbv0.3scaffold60610_976-10771' '(at2g25080 : 291.0) Encodes glutathione peroxidase.; glutathione peroxidase 1 (GPX1); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 7 (TAIR:AT4G31870.1); Has 7896 Blast hits to 7895 proteins in 1765 species: Archae - 2; Bacteria - 4003; Metazoa - 799; Fungi - 210; Plants - 390; Viruses - 8; Other Eukaryotes - 2484 (source: NCBI BLink). & (o24296|gpx1_pea : 287.0) Phospholipid hydroperoxide glutathione peroxidase, chloroplast precursor (EC 1.11.1.12) (PHGPx) - Pisum sativum (Garden pea) & (gnl|cdd|36864 : 267.0) no description available & (gnl|cdd|48492 : 246.0) no description available & (reliability: 572.0) & (original description: Putative gpx, Description = Glutathione peroxidase, PFAM = PF00255)' T '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'nbv0.3scaffold104232_1-3544' '(at1g63460 : 276.0) glutathione peroxidase 8 (GPX8); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 6 (TAIR:AT4G11600.1); Has 7264 Blast hits to 7263 proteins in 1725 species: Archae - 2; Bacteria - 3448; Metazoa - 795; Fungi - 210; Plants - 387; Viruses - 8; Other Eukaryotes - 2414 (source: NCBI BLink). & (q9lef0|gpx4_mescr : 256.0) Probable phospholipid hydroperoxide glutathione peroxidase (EC 1.11.1.12) (PHGPx) - Mesembryanthemum crystallinum (Common ice plant) & (gnl|cdd|36864 : 248.0) no description available & (gnl|cdd|48492 : 224.0) no description available & (reliability: 552.0) & (original description: Putative GPX8, Description = Probable glutathione peroxidase 8, PFAM = PF00255)' T '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'nbv0.5scaffold4321_99908-105714' '(at5g37830 : 2160.0) Encodes a 5-oxoprolinase that acts in the glutathione degradation pathway and in 5-oxoproline metabolism.; oxoprolinase 1 (OXP1); CONTAINS InterPro DOMAIN/s: Hydantoinase B/oxoprolinase (InterPro:IPR003692), Hydantoinase/oxoprolinase (InterPro:IPR002821), Hydantoinaseoxoprolinase, N-terminal (InterPro:IPR008040); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37150 : 1931.0) no description available & (gnl|cdd|30495 : 636.0) no description available & (reliability: 4320.0) & (original description: Putative OXP1, Description = 5-oxoprolinase, PFAM = PF01968;PF05378;PF02538)' T '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'nbv0.5scaffold4396_31817-65999' '(at2g48150 : 272.0) Encodes glutathione peroxidase.; glutathione peroxidase 4 (GPX4); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress, N-terminal protein myristoylation; LOCATED IN: cytosol; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 5 (TAIR:AT3G63080.1); Has 7346 Blast hits to 7345 proteins in 1724 species: Archae - 2; Bacteria - 3554; Metazoa - 785; Fungi - 210; Plants - 383; Viruses - 8; Other Eukaryotes - 2404 (source: NCBI BLink). & (gnl|cdd|36864 : 259.0) no description available & (gnl|cdd|48492 : 246.0) no description available & (q9lef0|gpx4_mescr : 238.0) Probable phospholipid hydroperoxide glutathione peroxidase (EC 1.11.1.12) (PHGPx) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 544.0) & (original description: Putative GPX4, Description = Probable glutathione peroxidase 4, PFAM = PF00255;PF00855;PF04818)' T '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben044scf00004569ctg005_3341-18669' '(gnl|cdd|86474 : 725.0) no description available & (o23732|gshb_braju : 689.0) Glutathione synthetase, chloroplast precursor (EC 6.3.2.3) (Glutathione synthase) (GSH synthetase) (GSH-S) - Brassica juncea (Leaf mustard) (Indian mustard) & (at5g27380 : 671.0) Encodes a protein with similarity to glutathione synthetases, which catalyzes one of the early steps in glutathione biosynthesis. Two transcripts have been detected; the longer transcript is less abundant and the protein is localized to the chloroplast. The smaller transcript, in which the transit peptide is truncated, is localized to the cytosol.; glutathione synthetase 2 (GSH2); FUNCTIONS IN: glutathione synthase activity; INVOLVED IN: response to jasmonic acid stimulus, N-terminal protein myristoylation, glutathione biosynthetic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Glutathione synthase, eukaryotic (InterPro:IPR005615), Glutathione synthase, substrate-binding, eukaryotic (InterPro:IPR004887), Glutathione synthase, alpha-helical, eukaryotic (InterPro:IPR014042); Has 644 Blast hits to 607 proteins in 239 species: Archae - 0; Bacteria - 51; Metazoa - 212; Fungi - 156; Plants - 112; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|35244 : 566.0) no description available & (reliability: 1342.0) & (original description: Putative GSH2, Description = Glutathione synthetase, chloroplastic, PFAM = PF03199;PF03917)' T '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben044scf00010425ctg000_1-8240' '(at3g24170 : 629.0) Encodes a cytosolic glutathione reductase.; glutathione-disulfide reductase (GR1); FUNCTIONS IN: NADP or NADPH binding, glutathione-disulfide reductase activity, oxidoreductase activity, FAD binding; INVOLVED IN: oxidation reduction, glutathione metabolic process, cell redox homeostasis; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Mercuric reductase (InterPro:IPR000815), Glutathione-disulphide reductase (InterPro:IPR006324), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: glutathione reductase (TAIR:AT3G54660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43621|gshrc_pea : 617.0) Glutathione reductase, cytosolic (EC 1.8.1.7) (GR) (GRase) (GOR2) - Pisum sativum (Garden pea) & (gnl|cdd|35626 : 481.0) no description available & (gnl|cdd|81850 : 417.0) no description available & (reliability: 1258.0) & (original description: Putative gr, Description = Glutathione reductase, PFAM = PF07992)' T '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben044scf00011617ctg000_1838-5722' '(at4g39640 : 612.0) The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in vascular tissues (predominantly phloem) of leaves and is involved in the degradation of glutathione. The encoded enzyme also mitigates oxidative stress by metabolizing GSSG (oxidized form of GSH - glutathione) in the apoplast.; gamma-glutamyl transpeptidase 1 (GGT1); FUNCTIONS IN: gamma-glutamyltransferase activity, glutathione gamma-glutamylcysteinyltransferase activity; INVOLVED IN: response to oxidative stress, glutathione catabolic process; LOCATED IN: apoplast, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-glutamyltranspeptidase (InterPro:IPR000101); BEST Arabidopsis thaliana protein match is: gamma-glutamyl transpeptidase 2 (TAIR:AT4G39650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37621 : 506.0) no description available & (gnl|cdd|85189 : 441.0) no description available & (reliability: 1120.0) & (original description: Putative GGT1, Description = Gamma-glutamyltranspeptidase 1, PFAM = PF01019)' T '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben044scf00026206ctg021_1335-8026' '(p80461|gshrp_tobac : 1046.0) Glutathione reductase, chloroplast precursor (EC 1.8.1.7) (GR) (GRase) (Fragment) - Nicotiana tabacum (Common tobacco) & (at3g54660 : 847.0) Encodes glutathione reductase that is most likely localized in the chloroplast.; glutathione reductase (GR); FUNCTIONS IN: glutathione-disulfide reductase activity, copper ion binding, ATP binding; INVOLVED IN: glutathione metabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Glutathione-disulphide reductase (InterPro:IPR006324), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099); BEST Arabidopsis thaliana protein match is: glutathione-disulfide reductase (TAIR:AT3G24170.3); Has 33740 Blast hits to 33692 proteins in 3140 species: Archae - 759; Bacteria - 24408; Metazoa - 813; Fungi - 438; Plants - 579; Viruses - 0; Other Eukaryotes - 6743 (source: NCBI BLink). & (gnl|cdd|35626 : 642.0) no description available & (gnl|cdd|81850 : 601.0) no description available & (reliability: 1694.0) & (original description: Putative GOR, Description = Glutathione reductase, chloroplastic, PFAM = PF02852;PF07992;PF07992)' T '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf00011_24739-108517' '(at2g48150 : 269.0) Encodes glutathione peroxidase.; glutathione peroxidase 4 (GPX4); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress, N-terminal protein myristoylation; LOCATED IN: cytosol; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 5 (TAIR:AT3G63080.1); Has 7346 Blast hits to 7345 proteins in 1724 species: Archae - 2; Bacteria - 3554; Metazoa - 785; Fungi - 210; Plants - 383; Viruses - 8; Other Eukaryotes - 2404 (source: NCBI BLink). & (gnl|cdd|36864 : 258.0) no description available & (gnl|cdd|48492 : 243.0) no description available & (q9lef0|gpx4_mescr : 234.0) Probable phospholipid hydroperoxide glutathione peroxidase (EC 1.11.1.12) (PHGPx) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 538.0) & (original description: Putative GPX4, Description = Probable glutathione peroxidase 4, PFAM = PF00255;PF00855;PF04818)' T '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf00551_206212-212858' '(at4g29210 : 755.0) The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in the vacuole and is most active in roots. The encoded enzyme is involved in the initial degradation of glutathione conjugates in this cell compartment. It is also induced by xenobiotics and contributes to xenobiotics metabolism. Note that conflicting nomenclature exists in the literature: At4g29210 is named as GGT3 in Plant J. 2007 Mar 49(5):878-88; At4g29210 is named as GGT4 and At1g69820 as GGT3 in Plant Physiol. 2007 Aug 144(4):1715-32.; gamma-glutamyl transpeptidase 4 (GGT4); CONTAINS InterPro DOMAIN/s: Gamma-glutamyltranspeptidase (InterPro:IPR000101); BEST Arabidopsis thaliana protein match is: gamma-glutamyl transpeptidase 1 (TAIR:AT4G39640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37621 : 632.0) no description available & (gnl|cdd|85189 : 557.0) no description available & (reliability: 1510.0) & (original description: Putative GGT3, Description = Gamma-glutamyltranspeptidase 3, PFAM = PF01019)' T '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf00963_230252-240160' '(gnl|cdd|86474 : 727.0) no description available & (o23732|gshb_braju : 689.0) Glutathione synthetase, chloroplast precursor (EC 6.3.2.3) (Glutathione synthase) (GSH synthetase) (GSH-S) - Brassica juncea (Leaf mustard) (Indian mustard) & (at5g27380 : 681.0) Encodes a protein with similarity to glutathione synthetases, which catalyzes one of the early steps in glutathione biosynthesis. Two transcripts have been detected; the longer transcript is less abundant and the protein is localized to the chloroplast. The smaller transcript, in which the transit peptide is truncated, is localized to the cytosol.; glutathione synthetase 2 (GSH2); FUNCTIONS IN: glutathione synthase activity; INVOLVED IN: response to jasmonic acid stimulus, N-terminal protein myristoylation, glutathione biosynthetic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Glutathione synthase, eukaryotic (InterPro:IPR005615), Glutathione synthase, substrate-binding, eukaryotic (InterPro:IPR004887), Glutathione synthase, alpha-helical, eukaryotic (InterPro:IPR014042); Has 644 Blast hits to 607 proteins in 239 species: Archae - 0; Bacteria - 51; Metazoa - 212; Fungi - 156; Plants - 112; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|35244 : 566.0) no description available & (reliability: 1362.0) & (original description: Putative GSH2, Description = Glutathione synthetase, chloroplastic, PFAM = PF03199;PF03917)' T '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf01177_264885-273322' '(at4g39640 : 389.0) The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in vascular tissues (predominantly phloem) of leaves and is involved in the degradation of glutathione. The encoded enzyme also mitigates oxidative stress by metabolizing GSSG (oxidized form of GSH - glutathione) in the apoplast.; gamma-glutamyl transpeptidase 1 (GGT1); FUNCTIONS IN: gamma-glutamyltransferase activity, glutathione gamma-glutamylcysteinyltransferase activity; INVOLVED IN: response to oxidative stress, glutathione catabolic process; LOCATED IN: apoplast, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-glutamyltranspeptidase (InterPro:IPR000101); BEST Arabidopsis thaliana protein match is: gamma-glutamyl transpeptidase 2 (TAIR:AT4G39650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37621 : 318.0) no description available & (gnl|cdd|85189 : 266.0) no description available & (reliability: 714.0) & (original description: Putative GGT4, Description = Putative inactive gamma-glutamyltranspeptidase 4, PFAM = PF01019)' T '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf01339_753764-759637' '(at2g31570 : 269.0) glutathione peroxidase GPx; glutathione peroxidase 2 (GPX2); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 7 (TAIR:AT4G31870.1); Has 7463 Blast hits to 7462 proteins in 1754 species: Archae - 2; Bacteria - 3597; Metazoa - 796; Fungi - 210; Plants - 383; Viruses - 8; Other Eukaryotes - 2467 (source: NCBI BLink). & (gnl|cdd|36864 : 257.0) no description available & (p30708|gpx4_nicsy : 244.0) Probable phospholipid hydroperoxide glutathione peroxidase (EC 1.11.1.12) (PHGPx) (6P229) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|48492 : 242.0) no description available & (reliability: 538.0) & (original description: Putative GPX2, Description = Probable glutathione peroxidase 2, PFAM = PF00255)' T '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf01927_703957-710389' '(at4g29210 : 761.0) The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in the vacuole and is most active in roots. The encoded enzyme is involved in the initial degradation of glutathione conjugates in this cell compartment. It is also induced by xenobiotics and contributes to xenobiotics metabolism. Note that conflicting nomenclature exists in the literature: At4g29210 is named as GGT3 in Plant J. 2007 Mar 49(5):878-88; At4g29210 is named as GGT4 and At1g69820 as GGT3 in Plant Physiol. 2007 Aug 144(4):1715-32.; gamma-glutamyl transpeptidase 4 (GGT4); CONTAINS InterPro DOMAIN/s: Gamma-glutamyltranspeptidase (InterPro:IPR000101); BEST Arabidopsis thaliana protein match is: gamma-glutamyl transpeptidase 1 (TAIR:AT4G39640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37621 : 636.0) no description available & (gnl|cdd|85189 : 555.0) no description available & (reliability: 1522.0) & (original description: Putative GGT3, Description = Gamma-glutamyltranspeptidase 3, PFAM = PF01019)' T '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf02469_84488-99130' '(p80461|gshrp_tobac : 1055.0) Glutathione reductase, chloroplast precursor (EC 1.8.1.7) (GR) (GRase) (Fragment) - Nicotiana tabacum (Common tobacco) & (at3g54660 : 865.0) Encodes glutathione reductase that is most likely localized in the chloroplast.; glutathione reductase (GR); FUNCTIONS IN: glutathione-disulfide reductase activity, copper ion binding, ATP binding; INVOLVED IN: glutathione metabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Glutathione-disulphide reductase (InterPro:IPR006324), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099); BEST Arabidopsis thaliana protein match is: glutathione-disulfide reductase (TAIR:AT3G24170.3); Has 33740 Blast hits to 33692 proteins in 3140 species: Archae - 759; Bacteria - 24408; Metazoa - 813; Fungi - 438; Plants - 579; Viruses - 0; Other Eukaryotes - 6743 (source: NCBI BLink). & (gnl|cdd|35626 : 663.0) no description available & (gnl|cdd|81850 : 620.0) no description available & (reliability: 1730.0) & (original description: Putative GOR, Description = Glutathione reductase, chloroplastic, PFAM = PF02852;PF07992)' T '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf02526_17646-33800' '(at2g25080 : 293.0) Encodes glutathione peroxidase.; glutathione peroxidase 1 (GPX1); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 7 (TAIR:AT4G31870.1); Has 7896 Blast hits to 7895 proteins in 1765 species: Archae - 2; Bacteria - 4003; Metazoa - 799; Fungi - 210; Plants - 390; Viruses - 8; Other Eukaryotes - 2484 (source: NCBI BLink). & (o24296|gpx1_pea : 290.0) Phospholipid hydroperoxide glutathione peroxidase, chloroplast precursor (EC 1.11.1.12) (PHGPx) - Pisum sativum (Garden pea) & (gnl|cdd|36864 : 265.0) no description available & (gnl|cdd|48492 : 244.0) no description available & (reliability: 578.0) & (original description: Putative gpx, Description = Glutathione peroxidase, PFAM = PF00255)' T '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf03208_196614-211546' '(q43621|gshrc_pea : 827.0) Glutathione reductase, cytosolic (EC 1.8.1.7) (GR) (GRase) (GOR2) - Pisum sativum (Garden pea) & (at3g24170 : 821.0) Encodes a cytosolic glutathione reductase.; glutathione-disulfide reductase (GR1); FUNCTIONS IN: NADP or NADPH binding, glutathione-disulfide reductase activity, oxidoreductase activity, FAD binding; INVOLVED IN: oxidation reduction, glutathione metabolic process, cell redox homeostasis; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Mercuric reductase (InterPro:IPR000815), Glutathione-disulphide reductase (InterPro:IPR006324), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: glutathione reductase (TAIR:AT3G54660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35626 : 644.0) no description available & (gnl|cdd|81850 : 570.0) no description available & (reliability: 1642.0) & (original description: Putative gr, Description = Glutathione reductase, PFAM = PF07992;PF02852)' T '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf05417_293386-302006' '(at4g23100 : 861.0) Encodes the enzyme glutamate-cysteine ligase catalyzing the first, and rate-limiting, step of glutathione biosynthesis. Required for cell proliferation at the root tip. Involved in susceptibility to the bacterial pathogen Pseudomonas syringae. Mutants are phytoalexin defective.; glutamate-cysteine ligase (GSH1); CONTAINS InterPro DOMAIN/s: Glutamate--cysteine ligase, GCS2 (InterPro:IPR006336), Glutamate--cysteine ligase, plant (InterPro:IPR011556). & (o23736|gsh1_braju : 858.0) Glutamate--cysteine ligase, chloroplast precursor (EC 6.3.2.2) (Gamma-glutamylcysteine synthetase) (Gamma-ECS) (GCS) - Brassica juncea (Leaf mustard) (Indian mustard) & (gnl|cdd|33374 : 569.0) no description available & (reliability: 1722.0) & (original description: Putative GSH1, Description = Glutamate--cysteine ligase, chloroplastic, PFAM = PF04107)' T '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf06369_288001-292547' '(q9fxs3|gpx4_tobac : 333.0) Probable phospholipid hydroperoxide glutathione peroxidase (EC 1.11.1.12) (PHGPx) (Nt-SubC08) - Nicotiana tabacum (Common tobacco) & (at4g11600 : 282.0) Encodes glutathione peroxidase.; glutathione peroxidase 6 (GPX6); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to salt stress, response to metal ion; LOCATED IN: cytosol, mitochondrion, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 7 (TAIR:AT4G31870.1); Has 7601 Blast hits to 7600 proteins in 1766 species: Archae - 2; Bacteria - 3728; Metazoa - 790; Fungi - 210; Plants - 383; Viruses - 8; Other Eukaryotes - 2480 (source: NCBI BLink). & (gnl|cdd|36864 : 261.0) no description available & (gnl|cdd|48492 : 238.0) no description available & (reliability: 564.0) & (original description: Putative gpx, Description = Glutathione peroxidase, PFAM = PF00255)' T '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf06369_423087-433830' '(at4g23100 : 874.0) Encodes the enzyme glutamate-cysteine ligase catalyzing the first, and rate-limiting, step of glutathione biosynthesis. Required for cell proliferation at the root tip. Involved in susceptibility to the bacterial pathogen Pseudomonas syringae. Mutants are phytoalexin defective.; glutamate-cysteine ligase (GSH1); CONTAINS InterPro DOMAIN/s: Glutamate--cysteine ligase, GCS2 (InterPro:IPR006336), Glutamate--cysteine ligase, plant (InterPro:IPR011556). & (o23736|gsh1_braju : 870.0) Glutamate--cysteine ligase, chloroplast precursor (EC 6.3.2.2) (Gamma-glutamylcysteine synthetase) (Gamma-ECS) (GCS) - Brassica juncea (Leaf mustard) (Indian mustard) & (gnl|cdd|33374 : 576.0) no description available & (reliability: 1748.0) & (original description: Putative GSH1, Description = Glutamate--cysteine ligase, chloroplastic, PFAM = PF04107)' T '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf07748_7868-15270' '(p80461|gshrp_tobac : 1065.0) Glutathione reductase, chloroplast precursor (EC 1.8.1.7) (GR) (GRase) (Fragment) - Nicotiana tabacum (Common tobacco) & (at3g54660 : 861.0) Encodes glutathione reductase that is most likely localized in the chloroplast.; glutathione reductase (GR); FUNCTIONS IN: glutathione-disulfide reductase activity, copper ion binding, ATP binding; INVOLVED IN: glutathione metabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Glutathione-disulphide reductase (InterPro:IPR006324), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099); BEST Arabidopsis thaliana protein match is: glutathione-disulfide reductase (TAIR:AT3G24170.3); Has 33740 Blast hits to 33692 proteins in 3140 species: Archae - 759; Bacteria - 24408; Metazoa - 813; Fungi - 438; Plants - 579; Viruses - 0; Other Eukaryotes - 6743 (source: NCBI BLink). & (gnl|cdd|35626 : 657.0) no description available & (gnl|cdd|81850 : 617.0) no description available & (reliability: 1722.0) & (original description: Putative GOR, Description = Glutathione reductase, chloroplastic, PFAM = PF02852;PF07992)' T '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf09459_46362-62078' '(q43621|gshrc_pea : 821.0) Glutathione reductase, cytosolic (EC 1.8.1.7) (GR) (GRase) (GOR2) - Pisum sativum (Garden pea) & (at3g24170 : 817.0) Encodes a cytosolic glutathione reductase.; glutathione-disulfide reductase (GR1); FUNCTIONS IN: NADP or NADPH binding, glutathione-disulfide reductase activity, oxidoreductase activity, FAD binding; INVOLVED IN: oxidation reduction, glutathione metabolic process, cell redox homeostasis; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Mercuric reductase (InterPro:IPR000815), Glutathione-disulphide reductase (InterPro:IPR006324), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: glutathione reductase (TAIR:AT3G54660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35626 : 641.0) no description available & (gnl|cdd|81850 : 569.0) no description available & (reliability: 1634.0) & (original description: Putative cGR, Description = Glutathione reductase, PFAM = PF07992;PF02852)' T '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'niben101scf11299_159245-165100' '(at2g48150 : 242.0) Encodes glutathione peroxidase.; glutathione peroxidase 4 (GPX4); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress, N-terminal protein myristoylation; LOCATED IN: cytosol; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 5 (TAIR:AT3G63080.1); Has 7346 Blast hits to 7345 proteins in 1724 species: Archae - 2; Bacteria - 3554; Metazoa - 785; Fungi - 210; Plants - 383; Viruses - 8; Other Eukaryotes - 2404 (source: NCBI BLink). & (gnl|cdd|36864 : 242.0) no description available & (gnl|cdd|48492 : 228.0) no description available & (o23814|gpx4_spiol : 219.0) Probable phospholipid hydroperoxide glutathione peroxidase (EC 1.11.1.12) (PHGPx) - Spinacia oleracea (Spinach) & (reliability: 484.0) & (original description: Putative GPX4, Description = Probable glutathione peroxidase 4, PFAM = PF00255)' T '21.3' 'redox.heme' 'nbv0.3scaffold12877_11066-14526' '(q93y92|hbl2_goshi : 216.0) Non-symbiotic hemoglobin 2 (Hb2) (GOShi GLB2) - Gossypium hirsutum (Upland cotton) & (at3g10520 : 209.0) class 2 non-symbiotic hemoglobin; haemoglobin 2 (HB2); FUNCTIONS IN: oxygen transporter activity; INVOLVED IN: response to cytokinin stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leghaemoglobin (InterPro:IPR001032), Globin-like (InterPro:IPR009050), Leghaemoglobin, iron-binding site (InterPro:IPR019824), Globin, subset (InterPro:IPR000971), Globin (InterPro:IPR012292); BEST Arabidopsis thaliana protein match is: hemoglobin 1 (TAIR:AT2G16060.1); Has 878 Blast hits to 840 proteins in 285 species: Archae - 0; Bacteria - 313; Metazoa - 196; Fungi - 34; Plants - 318; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|29979 : 97.8) no description available & (reliability: 418.0) & (original description: Putative HB2, Description = Non-symbiotic hemoglobin 2, PFAM = PF00042)' T '21.3' 'redox.heme' 'niben044scf00018262ctg018_3515-8759' '(at4g32690 : 273.0) Encodes a hemoglobin (Hb) with a central domain similar to the 'truncated Hbs of bacteria, protozoa and fungi. The 3D structure of these types of Hbs is a 2-on-2 arrangement of alpha-helices as opposed to the 3-on-3 arrangement of the standard globin fold. This type of Hb is not found in animals or yeast.; hemoglobin 3 (GLB3); CONTAINS InterPro DOMAIN/s: Globin, truncated bacterial-like (InterPro:IPR001486), Globin-like (InterPro:IPR009050), Globin (InterPro:IPR012292); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85274 : 131.0) no description available & (reliability: 546.0) & (original description: Putative GLB3, Description = Two-on-two hemoglobin-3, PFAM = PF01152)' T '21.3' 'redox.heme' 'niben101scf02182_105563-109655' '(q93y92|hbl2_goshi : 218.0) Non-symbiotic hemoglobin 2 (Hb2) (GOShi GLB2) - Gossypium hirsutum (Upland cotton) & (at3g10520 : 214.0) class 2 non-symbiotic hemoglobin; haemoglobin 2 (HB2); FUNCTIONS IN: oxygen transporter activity; INVOLVED IN: response to cytokinin stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leghaemoglobin (InterPro:IPR001032), Globin-like (InterPro:IPR009050), Leghaemoglobin, iron-binding site (InterPro:IPR019824), Globin, subset (InterPro:IPR000971), Globin (InterPro:IPR012292); BEST Arabidopsis thaliana protein match is: hemoglobin 1 (TAIR:AT2G16060.1); Has 878 Blast hits to 840 proteins in 285 species: Archae - 0; Bacteria - 313; Metazoa - 196; Fungi - 34; Plants - 318; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|29979 : 93.6) no description available & (reliability: 428.0) & (original description: Putative LBII, Description = Leghemoglobin-2, PFAM = PF00042)' T '21.3' 'redox.heme' 'niben101scf06068_134716-141183' '(at4g32690 : 271.0) Encodes a hemoglobin (Hb) with a central domain similar to the 'truncated Hbs of bacteria, protozoa and fungi. The 3D structure of these types of Hbs is a 2-on-2 arrangement of alpha-helices as opposed to the 3-on-3 arrangement of the standard globin fold. This type of Hb is not found in animals or yeast.; hemoglobin 3 (GLB3); CONTAINS InterPro DOMAIN/s: Globin, truncated bacterial-like (InterPro:IPR001486), Globin-like (InterPro:IPR009050), Globin (InterPro:IPR012292); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85274 : 131.0) no description available & (reliability: 542.0) & (original description: Putative GLB3, Description = Two-on-two hemoglobin-3, PFAM = PF01152)' T '21.3' 'redox.heme' 'niben101scf07645_452289-471445' '(at3g10130 : 316.0) SOUL heme-binding family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule; CONTAINS InterPro DOMAIN/s: SOUL haem-binding protein (InterPro:IPR006917); BEST Arabidopsis thaliana protein match is: SOUL heme-binding family protein (TAIR:AT5G20140.1); Has 1532 Blast hits to 1528 proteins in 169 species: Archae - 17; Bacteria - 184; Metazoa - 176; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 927 (source: NCBI BLink). & (gnl|cdd|68407 : 160.0) no description available & (reliability: 632.0) & (original description: Putative At3g10130, Description = Heme-binding-like protein At3g10130, chloroplastic, PFAM = PF04832)' T '21.3' 'redox.heme' 'niben101scf08328_12233-17700' '(at5g20140 : 517.0) SOUL heme-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790), SOUL haem-binding protein (InterPro:IPR006917); BEST Arabidopsis thaliana protein match is: SOUL heme-binding family protein (TAIR:AT3G10130.1). & (gnl|cdd|68407 : 119.0) no description available & (reliability: 1034.0) & (original description: Putative Os06g0597900, Description = Os06g0597900 protein, PFAM = PF04832;PF10184)' T '21.3' 'redox.heme' 'niben101scf10842_123725-127719' '(q9fvl0|hbl1_medsa : 234.0) Non-symbiotic hemoglobin 1 (MEDsa GLB1) - Medicago sativa (Alfalfa) & (at2g16060 : 214.0) Encodes a class 1 nonsymbiotic hemoglobin induced by low oxygen levels with very high oxygen affinity. It is not likely to be a hemoglobin transporter because of its extremely high affinity for oxygen.; hemoglobin 1 (HB1); FUNCTIONS IN: oxygen binding; INVOLVED IN: response to hypoxia; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leghaemoglobin (InterPro:IPR001032), Globin-like (InterPro:IPR009050), Leghaemoglobin, iron-binding site (InterPro:IPR019824), Globin, subset (InterPro:IPR000971), Globin (InterPro:IPR012292); BEST Arabidopsis thaliana protein match is: haemoglobin 2 (TAIR:AT3G10520.1); Has 783 Blast hits to 745 proteins in 194 species: Archae - 0; Bacteria - 173; Metazoa - 274; Fungi - 3; Plants - 318; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|29979 : 95.9) no description available & (reliability: 428.0) & (original description: Putative MHB1, Description = Non-symbiotic hemoglobin 1, PFAM = PF00042)' T '21.4' 'redox.glutaredoxins' 'nbv0.3scaffold23684_23924-27140' '(at4g10630 : 275.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT1G32760.1); Has 492 Blast hits to 487 proteins in 66 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 0; Plants - 372; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|38035 : 251.0) no description available & (gnl|cdd|48580 : 205.0) no description available & (reliability: 550.0) & (original description: Putative BnaA09g24210D, Description = BnaA09g24210D protein, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'nbv0.3scaffold26339_20002-22370' '(at3g02000 : 130.0) Roxy1 encodes a glutaredoxin belonging to a subgroup specific to higher plants. It is required for proper petal initiation and organogenesis. It is likely to function in the temporal and spatial expression regulation of AGAMOUS in the first and second whorl. It's function is dependent on the Cysteine 49 residue and its nuclear localization. ROXY1 interacts in vitro and in vivo with members of the TGA family of transcription factors (e.g. TGA2, TGA3, TGA7 and PAN).; ROXY1; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT5G14070.1); Has 1149 Blast hits to 1147 proteins in 188 species: Archae - 0; Bacteria - 38; Metazoa - 213; Fungi - 109; Plants - 748; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|36963 : 123.0) no description available & (gnl|cdd|48634 : 97.9) no description available & (reliability: 260.0) & (original description: Putative GRXC8, Description = Glutaredoxin-C8, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'nbv0.3scaffold39267_17009-19773' '(at3g11920 : 233.0) glutaredoxin-related; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: intracellular signaling pathway, cell redox homeostasis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336), DEP domain (InterPro:IPR000591), Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: electron carriers;protein disulfide oxidoreductases (TAIR:AT4G08550.1); Has 2850 Blast hits to 2806 proteins in 762 species: Archae - 4; Bacteria - 1389; Metazoa - 366; Fungi - 36; Plants - 426; Viruses - 0; Other Eukaryotes - 629 (source: NCBI BLink). & (gnl|cdd|48576 : 110.0) no description available & (reliability: 466.0) & (original description: Putative At3g11920, Description = Dishevelled/Egl-10/leckstrin domain protein, PFAM = PF00610;PF00462)' T '21.4' 'redox.glutaredoxins' 'nbv0.5scaffold926_322132-356972' '(at5g20500 : 174.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin (InterPro:IPR002109), Glutaredoxin active site (InterPro:IPR011767), Glutaredoxin, eukaryotic/virial (InterPro:IPR011899), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT1G77370.1); Has 5770 Blast hits to 5765 proteins in 1222 species: Archae - 22; Bacteria - 2763; Metazoa - 448; Fungi - 348; Plants - 743; Viruses - 110; Other Eukaryotes - 1336 (source: NCBI BLink). & (gnl|cdd|48634 : 130.0) no description available & (gnl|cdd|36963 : 129.0) no description available & (p55143|glrx_ricco : 97.8) Glutaredoxin - Ricinus communis (Castor bean) & (reliability: 348.0) & (original description: Putative glr1, Description = Glutaredoxin, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'nbv0.5scaffold1148_168789-183007' '(at3g11920 : 629.0) glutaredoxin-related; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: intracellular signaling pathway, cell redox homeostasis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336), DEP domain (InterPro:IPR000591), Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: electron carriers;protein disulfide oxidoreductases (TAIR:AT4G08550.1); Has 2850 Blast hits to 2806 proteins in 762 species: Archae - 4; Bacteria - 1389; Metazoa - 366; Fungi - 36; Plants - 426; Viruses - 0; Other Eukaryotes - 629 (source: NCBI BLink). & (gnl|cdd|68359 : 142.0) no description available & (reliability: 1258.0) & (original description: Putative PGSC0003DMG400016401, Description = Electron transporter, putative, PFAM = PF00610;PF04784;PF00462)' T '21.4' 'redox.glutaredoxins' 'nbv0.5scaffold1561_225018-228472' '(at1g64500 : 247.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT4G10630.1); Has 634 Blast hits to 632 proteins in 121 species: Archae - 0; Bacteria - 58; Metazoa - 133; Fungi - 28; Plants - 384; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|38035 : 204.0) no description available & (gnl|cdd|48580 : 192.0) no description available & (reliability: 494.0) & (original description: Putative At1g64500, Description = F1N19.7, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'nbv0.5scaffold2236_175936-181819' '(at5g13810 : 147.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT3G57070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38035 : 127.0) no description available & (gnl|cdd|48580 : 114.0) no description available & (reliability: 294.0) & (original description: Putative Grx, Description = Glutaredoxin family protein, PFAM = )' T '21.4' 'redox.glutaredoxins' 'niben044scf00001656ctg002_1-2575' '(at4g10630 : 272.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT1G32760.1); Has 492 Blast hits to 487 proteins in 66 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 0; Plants - 372; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|38035 : 249.0) no description available & (gnl|cdd|48580 : 200.0) no description available & (reliability: 544.0) & (original description: Putative At1g32760, Description = At1g32760, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben044scf00010493ctg005_618-4033' '(at2g41330 : 287.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT3G57070.1); Has 590 Blast hits to 589 proteins in 102 species: Archae - 0; Bacteria - 67; Metazoa - 107; Fungi - 0; Plants - 381; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|38035 : 239.0) no description available & (gnl|cdd|48580 : 217.0) no description available & (reliability: 574.0) & (original description: Putative BnaA09g36420D, Description = BnaA09g36420D protein, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben044scf00012113ctg004_1-2131' '(at1g77370 : 105.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin, eukaryotic/virial (InterPro:IPR011899), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT5G20500.1); Has 6011 Blast hits to 6006 proteins in 1282 species: Archae - 24; Bacteria - 3163; Metazoa - 423; Fungi - 346; Plants - 622; Viruses - 111; Other Eukaryotes - 1322 (source: NCBI BLink). & (gnl|cdd|48634 : 98.7) no description available & (gnl|cdd|36963 : 94.5) no description available & (reliability: 210.0) & (original description: Putative GLU1, Description = Glutaredoxin-C4, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben044scf00018132ctg005_838-3778' '(gnl|cdd|38035 : 152.0) no description available & (at5g06470 : 143.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G11773.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|48580 : 140.0) no description available & (reliability: 286.0) & (original description: Putative PGSC0003DMG402021334, Description = Glutaredoxin family protein, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben044scf00019221ctg006_5559-21453' '(at5g13810 : 145.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT3G57070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38035 : 128.0) no description available & (gnl|cdd|48580 : 119.0) no description available & (reliability: 290.0) & (original description: Putative Grx, Description = Glutaredoxin family protein, PFAM = )' T '21.4' 'redox.glutaredoxins' 'niben044scf00019943ctg008_1-3934' '(at4g08550 : 391.0) electron carriers;protein disulfide oxidoreductases; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336), Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: glutaredoxin-related (TAIR:AT3G11920.1); Has 5684 Blast hits to 4425 proteins in 725 species: Archae - 19; Bacteria - 1130; Metazoa - 1053; Fungi - 285; Plants - 562; Viruses - 105; Other Eukaryotes - 2530 (source: NCBI BLink). & (gnl|cdd|68359 : 169.0) no description available & (reliability: 782.0) & (original description: Putative v1g128201, Description = Electron transporter, putative, PFAM = PF04784)' T '21.4' 'redox.glutaredoxins' 'niben044scf00023808ctg018_7756-10064' '(at4g15660 : 150.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Glutaredoxin (InterPro:IPR002109), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G15670.1); Has 1520 Blast hits to 1515 proteins in 222 species: Archae - 0; Bacteria - 20; Metazoa - 424; Fungi - 241; Plants - 751; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (gnl|cdd|36963 : 135.0) no description available & (gnl|cdd|48634 : 109.0) no description available & (reliability: 300.0) & (original description: Putative GRXS2, Description = Monothiol glutaredoxin-S2, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf00082_293023-295328' '(at3g21460 : 163.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G15700.1); Has 1364 Blast hits to 1360 proteins in 220 species: Archae - 0; Bacteria - 35; Metazoa - 262; Fungi - 243; Plants - 766; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|36963 : 134.0) no description available & (gnl|cdd|48634 : 113.0) no description available & (reliability: 326.0) & (original description: Putative GRXS10, Description = Monothiol glutaredoxin-S10, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf00082_523530-525838' '(at4g15660 : 154.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Glutaredoxin (InterPro:IPR002109), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G15670.1); Has 1520 Blast hits to 1515 proteins in 222 species: Archae - 0; Bacteria - 20; Metazoa - 424; Fungi - 241; Plants - 751; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (gnl|cdd|36963 : 137.0) no description available & (gnl|cdd|48634 : 109.0) no description available & (reliability: 308.0) & (original description: Putative GRXS3, Description = Monothiol glutaredoxin-S3, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf00109_529907-532275' '(at3g02000 : 127.0) Roxy1 encodes a glutaredoxin belonging to a subgroup specific to higher plants. It is required for proper petal initiation and organogenesis. It is likely to function in the temporal and spatial expression regulation of AGAMOUS in the first and second whorl. It's function is dependent on the Cysteine 49 residue and its nuclear localization. ROXY1 interacts in vitro and in vivo with members of the TGA family of transcription factors (e.g. TGA2, TGA3, TGA7 and PAN).; ROXY1; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT5G14070.1); Has 1149 Blast hits to 1147 proteins in 188 species: Archae - 0; Bacteria - 38; Metazoa - 213; Fungi - 109; Plants - 748; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|36963 : 123.0) no description available & (gnl|cdd|48634 : 96.4) no description available & (reliability: 254.0) & (original description: Putative GRX3, Description = Glutaredoxin, grx, putative, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf00123_721495-726000' '(at3g15660 : 220.0) glutaredoxin 4 (GRX4); FUNCTIONS IN: metal ion binding; INVOLVED IN: cell redox homeostasis; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin (InterPro:IPR002109), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutaredoxin-related protein (InterPro:IPR004480); BEST Arabidopsis thaliana protein match is: thioredoxin family protein (TAIR:AT4G04950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|48577 : 148.0) no description available & (gnl|cdd|36129 : 143.0) no description available & (reliability: 440.0) & (original description: Putative GRXS15, Description = Monothiol glutaredoxin-S15, mitochondrial, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf00132_141578-146488' '(at1g64500 : 248.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT4G10630.1); Has 634 Blast hits to 632 proteins in 121 species: Archae - 0; Bacteria - 58; Metazoa - 133; Fungi - 28; Plants - 384; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|38035 : 206.0) no description available & (gnl|cdd|48580 : 193.0) no description available & (reliability: 496.0) & (original description: Putative At1g64500, Description = F1N19.7, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf00445_37715-40107' '(gnl|cdd|36963 : 133.0) no description available & (at5g14070 : 121.0) Encodes glutaredoxin ROXY2. ROXY2, together with ROXY1 (AT3G02000), controls anther development. roxy1 roxy2 double mutants are sterile and do not produce pollen.; ROXY2; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: negative regulation of transcription, anther development; LOCATED IN: cellular_component unknown; EXPRESSED IN: tapetum, floral meristem, hypocotyl, anther, root; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Glutaredoxin (InterPro:IPR002109), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G02000.1); Has 1062 Blast hits to 1060 proteins in 157 species: Archae - 0; Bacteria - 4; Metazoa - 185; Fungi - 99; Plants - 740; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|48634 : 111.0) no description available & (reliability: 242.0) & (original description: Putative GRXC1, Description = Glutaredoxin-C1, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf00525_158613-161758' '(gnl|cdd|38035 : 202.0) no description available & (at5g06470 : 200.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G11773.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|48580 : 196.0) no description available & (reliability: 400.0) & (original description: Putative At3g11773, Description = Electron carrier/ protein disulfide oxidoreductase, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf00597_634760-640304' '(at4g28730 : 179.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Glutaredoxin, eukaryotic/virial (InterPro:IPR011899), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT2G20270.1); Has 4412 Blast hits to 4405 proteins in 1169 species: Archae - 6; Bacteria - 1982; Metazoa - 422; Fungi - 333; Plants - 692; Viruses - 111; Other Eukaryotes - 866 (source: NCBI BLink). & (gnl|cdd|36963 : 133.0) no description available & (gnl|cdd|48634 : 121.0) no description available & (p55142|glrx_orysa : 100.0) Glutaredoxin - Oryza sativa (Rice) & (reliability: 358.0) & (original description: Putative glr1, Description = Glutaredoxin, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf00782_119120-122262' '(gnl|cdd|38035 : 202.0) no description available & (at5g06470 : 199.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G11773.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|48580 : 193.0) no description available & (reliability: 398.0) & (original description: Putative At3g11773, Description = Electron carrier/ protein disulfide oxidoreductase, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf00823_1-2041' '(at3g62950 : 157.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Glutaredoxin (InterPro:IPR002109), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT2G47870.1); Has 1580 Blast hits to 1576 proteins in 382 species: Archae - 0; Bacteria - 356; Metazoa - 244; Fungi - 174; Plants - 738; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|36963 : 122.0) no description available & (gnl|cdd|48634 : 102.0) no description available & (reliability: 314.0) & (original description: Putative GRXC11, Description = Glutaredoxin-C11, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf00823_52020-54322' '(at2g47880 : 147.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G62960.1); Has 1229 Blast hits to 1227 proteins in 226 species: Archae - 0; Bacteria - 96; Metazoa - 226; Fungi - 100; Plants - 735; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (gnl|cdd|36963 : 121.0) no description available & (gnl|cdd|48634 : 94.0) no description available & (reliability: 294.0) & (original description: Putative GRXC13, Description = Glutaredoxin-C13, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf00885_1164477-1166866' '(gnl|cdd|36963 : 114.0) no description available & (at5g14070 : 112.0) Encodes glutaredoxin ROXY2. ROXY2, together with ROXY1 (AT3G02000), controls anther development. roxy1 roxy2 double mutants are sterile and do not produce pollen.; ROXY2; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: negative regulation of transcription, anther development; LOCATED IN: cellular_component unknown; EXPRESSED IN: tapetum, floral meristem, hypocotyl, anther, root; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Glutaredoxin (InterPro:IPR002109), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G02000.1); Has 1062 Blast hits to 1060 proteins in 157 species: Archae - 0; Bacteria - 4; Metazoa - 185; Fungi - 99; Plants - 740; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|48634 : 96.0) no description available & (p55143|glrx_ricco : 87.8) Glutaredoxin - Ricinus communis (Castor bean) & (reliability: 224.0) & (original description: Putative GRXC3, Description = Glutaredoxin-C3, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf01078_152903-157935' '(at5g63030 : 173.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Glutaredoxin, eukaryotic/virial (InterPro:IPR011899), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT5G40370.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p55143|glrx_ricco : 150.0) Glutaredoxin - Ricinus communis (Castor bean) & (gnl|cdd|36963 : 136.0) no description available & (gnl|cdd|48634 : 129.0) no description available & (reliability: 346.0) & (original description: Putative GRXC1, Description = Glutaredoxin-C1, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf01177_648944-651249' '(at1g03020 : 122.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G62930.1); Has 1690 Blast hits to 1687 proteins in 285 species: Archae - 0; Bacteria - 112; Metazoa - 344; Fungi - 348; Plants - 762; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36963 : 121.0) no description available & (gnl|cdd|48634 : 107.0) no description available & (reliability: 244.0) & (original description: Putative GRXS1, Description = Monothiol glutaredoxin-S1, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf01274_598400-601467' '(at3g57070 : 243.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT2G41330.1); Has 1224 Blast hits to 656 proteins in 101 species: Archae - 0; Bacteria - 41; Metazoa - 125; Fungi - 4; Plants - 389; Viruses - 0; Other Eukaryotes - 665 (source: NCBI BLink). & (gnl|cdd|38035 : 228.0) no description available & (gnl|cdd|48580 : 201.0) no description available & (reliability: 486.0) & (original description: Putative Grx, Description = Glutaredoxin family protein, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf01326_710239-713534' '(at3g28850 : 318.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT5G39865.1); Has 637 Blast hits to 625 proteins in 107 species: Archae - 0; Bacteria - 51; Metazoa - 127; Fungi - 21; Plants - 387; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (gnl|cdd|38035 : 214.0) no description available & (gnl|cdd|48580 : 204.0) no description available & (reliability: 636.0) & (original description: Putative At3g28850, Description = Uncharacterized protein At3g28850, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf01362_247556-250560' '(at5g39865 : 271.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT3G28850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38035 : 230.0) no description available & (gnl|cdd|48580 : 202.0) no description available & (reliability: 542.0) & (original description: Putative BnaAnng33180D, Description = BnaAnng33180D protein, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf01433_213249-225288' '(at1g77370 : 144.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin, eukaryotic/virial (InterPro:IPR011899), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT5G20500.1); Has 6011 Blast hits to 6006 proteins in 1282 species: Archae - 24; Bacteria - 3163; Metazoa - 423; Fungi - 346; Plants - 622; Viruses - 111; Other Eukaryotes - 1322 (source: NCBI BLink). & (gnl|cdd|48634 : 119.0) no description available & (gnl|cdd|36963 : 117.0) no description available & (p55143|glrx_ricco : 83.2) Glutaredoxin - Ricinus communis (Castor bean) & (reliability: 288.0) & (original description: Putative GRXS6, Description = Monothiol glutaredoxin-S6, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf01462_640-3053' '(at1g28480 : 137.0) Encodes GRX480, a member of the glutaredoxin family that regulates protein redox state. GRX480 interacts with TGA factors and suppresses JA-responsive PDF1.2 transcription. GRX480 transcription is SA-inducible and requires NPR1. Maybe involved in SA/JA cross-talk.; GRX480; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: salicylic acid mediated signaling pathway, jasmonic acid mediated signaling pathway, response to salicylic acid stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT1G03850.2); Has 774 Blast hits to 772 proteins in 85 species: Archae - 0; Bacteria - 6; Metazoa - 52; Fungi - 18; Plants - 684; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|36963 : 103.0) no description available & (reliability: 274.0) & (original description: Putative GRXC9, Description = Glutaredoxin-C9, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf01758_93106-95411' '(at5g18600 : 138.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G15680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36963 : 119.0) no description available & (gnl|cdd|48634 : 105.0) no description available & (reliability: 276.0) & (original description: Putative GRXS2, Description = Monothiol glutaredoxin-S2, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf01758_181435-183740' '(at3g62930 : 129.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G03020.1); Has 1393 Blast hits to 1390 proteins in 224 species: Archae - 0; Bacteria - 15; Metazoa - 320; Fungi - 249; Plants - 741; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|36963 : 113.0) no description available & (gnl|cdd|48634 : 102.0) no description available & (reliability: 258.0) & (original description: Putative GRXS6, Description = Monothiol glutaredoxin-S6, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf01777_173367-175807' '(at4g33040 : 142.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT5G11930.1); Has 1149 Blast hits to 1147 proteins in 175 species: Archae - 0; Bacteria - 20; Metazoa - 257; Fungi - 124; Plants - 712; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|36963 : 105.0) no description available & (gnl|cdd|48634 : 83.6) no description available & (reliability: 284.0) & (original description: Putative GRXC7, Description = Glutaredoxin-C7, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf01998_529575-532015' '(at4g33040 : 145.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT5G11930.1); Has 1149 Blast hits to 1147 proteins in 175 species: Archae - 0; Bacteria - 20; Metazoa - 257; Fungi - 124; Plants - 712; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|36963 : 105.0) no description available & (gnl|cdd|48634 : 84.0) no description available & (reliability: 290.0) & (original description: Putative GRXC6, Description = Glutaredoxin-C6, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf02253_82474-85736' '(at3g28850 : 275.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT5G39865.1); Has 637 Blast hits to 625 proteins in 107 species: Archae - 0; Bacteria - 51; Metazoa - 127; Fungi - 21; Plants - 387; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (gnl|cdd|38035 : 216.0) no description available & (gnl|cdd|48580 : 204.0) no description available & (reliability: 550.0) & (original description: Putative At3g28850, Description = Uncharacterized protein At3g28850, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf02457_105171-107470' '(at2g47880 : 150.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G62960.1); Has 1229 Blast hits to 1227 proteins in 226 species: Archae - 0; Bacteria - 96; Metazoa - 226; Fungi - 100; Plants - 735; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (gnl|cdd|36963 : 126.0) no description available & (gnl|cdd|48634 : 98.7) no description available & (reliability: 300.0) & (original description: Putative GRXC13, Description = Glutaredoxin-C13, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf02996_83688-86083' '(at5g14070 : 142.0) Encodes glutaredoxin ROXY2. ROXY2, together with ROXY1 (AT3G02000), controls anther development. roxy1 roxy2 double mutants are sterile and do not produce pollen.; ROXY2; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: negative regulation of transcription, anther development; LOCATED IN: cellular_component unknown; EXPRESSED IN: tapetum, floral meristem, hypocotyl, anther, root; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Glutaredoxin (InterPro:IPR002109), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G02000.1); Has 1062 Blast hits to 1060 proteins in 157 species: Archae - 0; Bacteria - 4; Metazoa - 185; Fungi - 99; Plants - 740; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|36963 : 135.0) no description available & (gnl|cdd|48634 : 114.0) no description available & (p55143|glrx_ricco : 80.5) Glutaredoxin - Ricinus communis (Castor bean) & (reliability: 284.0) & (original description: Putative GRXC1, Description = Glutaredoxin-C1, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf03169_599397-601798' '(gnl|cdd|36963 : 98.4) no description available & (at1g28480 : 82.0) Encodes GRX480, a member of the glutaredoxin family that regulates protein redox state. GRX480 interacts with TGA factors and suppresses JA-responsive PDF1.2 transcription. GRX480 transcription is SA-inducible and requires NPR1. Maybe involved in SA/JA cross-talk.; GRX480; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: salicylic acid mediated signaling pathway, jasmonic acid mediated signaling pathway, response to salicylic acid stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT1G03850.2); Has 774 Blast hits to 772 proteins in 85 species: Archae - 0; Bacteria - 6; Metazoa - 52; Fungi - 18; Plants - 684; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative GRX1, Description = Glutaredoxin-C1 protein, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf03427_966327-968986' '(at1g28480 : 105.0) Encodes GRX480, a member of the glutaredoxin family that regulates protein redox state. GRX480 interacts with TGA factors and suppresses JA-responsive PDF1.2 transcription. GRX480 transcription is SA-inducible and requires NPR1. Maybe involved in SA/JA cross-talk.; GRX480; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: salicylic acid mediated signaling pathway, jasmonic acid mediated signaling pathway, response to salicylic acid stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT1G03850.2); Has 774 Blast hits to 772 proteins in 85 species: Archae - 0; Bacteria - 6; Metazoa - 52; Fungi - 18; Plants - 684; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|36963 : 99.1) no description available & (reliability: 210.0) & (original description: Putative GRX6, Description = Glutaredoxin-C1 protein, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf04019_208375-210680' '(at3g62930 : 136.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G03020.1); Has 1393 Blast hits to 1390 proteins in 224 species: Archae - 0; Bacteria - 15; Metazoa - 320; Fungi - 249; Plants - 741; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|36963 : 127.0) no description available & (gnl|cdd|48634 : 102.0) no description available & (reliability: 272.0) & (original description: Putative GRXS6, Description = Monothiol glutaredoxin-S6, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf04173_72638-75087' '(at1g28480 : 143.0) Encodes GRX480, a member of the glutaredoxin family that regulates protein redox state. GRX480 interacts with TGA factors and suppresses JA-responsive PDF1.2 transcription. GRX480 transcription is SA-inducible and requires NPR1. Maybe involved in SA/JA cross-talk.; GRX480; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: salicylic acid mediated signaling pathway, jasmonic acid mediated signaling pathway, response to salicylic acid stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT1G03850.2); Has 774 Blast hits to 772 proteins in 85 species: Archae - 0; Bacteria - 6; Metazoa - 52; Fungi - 18; Plants - 684; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|36963 : 98.8) no description available & (reliability: 286.0) & (original description: Putative GRXC9, Description = Glutaredoxin-C9, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf04448_160124-168339' '(at5g13810 : 251.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT3G57070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38035 : 222.0) no description available & (gnl|cdd|48580 : 213.0) no description available & (reliability: 502.0) & (original description: Putative Grx, Description = Glutaredoxin, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf04500_212222-214527' '(at3g62930 : 127.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G03020.1); Has 1393 Blast hits to 1390 proteins in 224 species: Archae - 0; Bacteria - 15; Metazoa - 320; Fungi - 249; Plants - 741; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|36963 : 113.0) no description available & (gnl|cdd|48634 : 103.0) no description available & (reliability: 254.0) & (original description: Putative GRXS6, Description = Monothiol glutaredoxin-S6, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf04500_301238-303543' '(at5g18600 : 137.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G15680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36963 : 119.0) no description available & (gnl|cdd|48634 : 105.0) no description available & (reliability: 274.0) & (original description: Putative GRXS2, Description = Monothiol glutaredoxin-S2, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf04555_52872-64182' '(at5g20500 : 176.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin (InterPro:IPR002109), Glutaredoxin active site (InterPro:IPR011767), Glutaredoxin, eukaryotic/virial (InterPro:IPR011899), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT1G77370.1); Has 5770 Blast hits to 5765 proteins in 1222 species: Archae - 22; Bacteria - 2763; Metazoa - 448; Fungi - 348; Plants - 743; Viruses - 110; Other Eukaryotes - 1336 (source: NCBI BLink). & (gnl|cdd|48634 : 131.0) no description available & (gnl|cdd|36963 : 129.0) no description available & (p55143|glrx_ricco : 99.0) Glutaredoxin - Ricinus communis (Castor bean) & (reliability: 352.0) & (original description: Putative GRX, Description = Glutaredoxin, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf04792_90760-93227' '(at1g28480 : 132.0) Encodes GRX480, a member of the glutaredoxin family that regulates protein redox state. GRX480 interacts with TGA factors and suppresses JA-responsive PDF1.2 transcription. GRX480 transcription is SA-inducible and requires NPR1. Maybe involved in SA/JA cross-talk.; GRX480; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: salicylic acid mediated signaling pathway, jasmonic acid mediated signaling pathway, response to salicylic acid stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT1G03850.2); Has 774 Blast hits to 772 proteins in 85 species: Archae - 0; Bacteria - 6; Metazoa - 52; Fungi - 18; Plants - 684; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|36963 : 96.8) no description available & (reliability: 264.0) & (original description: Putative GRX6, Description = Glutaredoxin-C1 protein, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf04921_182072-185013' '(gnl|cdd|38035 : 214.0) no description available & (gnl|cdd|48580 : 202.0) no description available & (at5g06470 : 191.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G11773.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative At3g11773, Description = Electron carrier/ protein disulfide oxidoreductase, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf04934_198176-201107' '(gnl|cdd|38035 : 146.0) no description available & (at5g06470 : 141.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G11773.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|48580 : 134.0) no description available & (reliability: 282.0) & (original description: Putative PGSC0003DMG402021334, Description = Glutaredoxin family protein, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf05078_207437-209763' '(gnl|cdd|36963 : 130.0) no description available & (at5g14070 : 123.0) Encodes glutaredoxin ROXY2. ROXY2, together with ROXY1 (AT3G02000), controls anther development. roxy1 roxy2 double mutants are sterile and do not produce pollen.; ROXY2; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: negative regulation of transcription, anther development; LOCATED IN: cellular_component unknown; EXPRESSED IN: tapetum, floral meristem, hypocotyl, anther, root; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Glutaredoxin (InterPro:IPR002109), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G02000.1); Has 1062 Blast hits to 1060 proteins in 157 species: Archae - 0; Bacteria - 4; Metazoa - 185; Fungi - 99; Plants - 740; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|48634 : 110.0) no description available & (reliability: 246.0) & (original description: Putative GRXC1, Description = Glutaredoxin-C1, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf06172_424910-428199' '(at3g28850 : 312.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT5G39865.1); Has 637 Blast hits to 625 proteins in 107 species: Archae - 0; Bacteria - 51; Metazoa - 127; Fungi - 21; Plants - 387; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (gnl|cdd|38035 : 214.0) no description available & (gnl|cdd|48580 : 205.0) no description available & (reliability: 624.0) & (original description: Putative At3g28850, Description = Uncharacterized protein At3g28850, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf06345_409519-411824' '(at1g03020 : 127.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G62930.1); Has 1690 Blast hits to 1687 proteins in 285 species: Archae - 0; Bacteria - 112; Metazoa - 344; Fungi - 348; Plants - 762; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36963 : 102.0) no description available & (gnl|cdd|48634 : 81.3) no description available & (reliability: 254.0) & (original description: Putative GRX1, Description = GRX1 protein, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf06486_703377-709785' '(at5g20500 : 176.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin (InterPro:IPR002109), Glutaredoxin active site (InterPro:IPR011767), Glutaredoxin, eukaryotic/virial (InterPro:IPR011899), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT1G77370.1); Has 5770 Blast hits to 5765 proteins in 1222 species: Archae - 22; Bacteria - 2763; Metazoa - 448; Fungi - 348; Plants - 743; Viruses - 110; Other Eukaryotes - 1336 (source: NCBI BLink). & (gnl|cdd|48634 : 131.0) no description available & (gnl|cdd|36963 : 130.0) no description available & (p55143|glrx_ricco : 98.2) Glutaredoxin - Ricinus communis (Castor bean) & (reliability: 352.0) & (original description: Putative GRXC4, Description = Glutaredoxin-C4, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf06504_108087-112222' '(at1g64500 : 263.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT4G10630.1); Has 634 Blast hits to 632 proteins in 121 species: Archae - 0; Bacteria - 58; Metazoa - 133; Fungi - 28; Plants - 384; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|38035 : 211.0) no description available & (gnl|cdd|48580 : 194.0) no description available & (reliability: 526.0) & (original description: Putative Grx, Description = Glutaredoxin family protein, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf09097_220470-237646' '(at3g11920 : 233.0) glutaredoxin-related; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: intracellular signaling pathway, cell redox homeostasis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336), DEP domain (InterPro:IPR000591), Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: electron carriers;protein disulfide oxidoreductases (TAIR:AT4G08550.1); Has 2850 Blast hits to 2806 proteins in 762 species: Archae - 4; Bacteria - 1389; Metazoa - 366; Fungi - 36; Plants - 426; Viruses - 0; Other Eukaryotes - 629 (source: NCBI BLink). & (gnl|cdd|48576 : 110.0) no description available & (reliability: 466.0) & (original description: Putative At3g11920, Description = Dishevelled/Egl-10/leckstrin domain protein, PFAM = PF00462;PF00610)' T '21.4' 'redox.glutaredoxins' 'niben101scf11245_16136-18441' '(at1g03020 : 134.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G62930.1); Has 1690 Blast hits to 1687 proteins in 285 species: Archae - 0; Bacteria - 112; Metazoa - 344; Fungi - 348; Plants - 762; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36963 : 125.0) no description available & (gnl|cdd|48634 : 110.0) no description available & (reliability: 268.0) & (original description: Putative GRX3, Description = Glutaredoxin, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf11251_45109-47843' '(gnl|cdd|38035 : 209.0) no description available & (at5g58530 : 208.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT5G13810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|48580 : 195.0) no description available & (reliability: 416.0) & (original description: Putative BnaA02g07580D, Description = BnaA02g07580D protein, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf13683_278547-281755' '(at3g57070 : 293.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT2G41330.1); Has 1224 Blast hits to 656 proteins in 101 species: Archae - 0; Bacteria - 41; Metazoa - 125; Fungi - 4; Plants - 389; Viruses - 0; Other Eukaryotes - 665 (source: NCBI BLink). & (gnl|cdd|38035 : 242.0) no description available & (gnl|cdd|48580 : 217.0) no description available & (reliability: 586.0) & (original description: Putative BnaA09g36420D, Description = BnaA09g36420D protein, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf13748_70491-72548' '(at3g62930 : 134.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G03020.1); Has 1393 Blast hits to 1390 proteins in 224 species: Archae - 0; Bacteria - 15; Metazoa - 320; Fungi - 249; Plants - 741; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|36963 : 126.0) no description available & (gnl|cdd|48634 : 103.0) no description available & (reliability: 268.0) & (original description: Putative GRXS6, Description = Monothiol glutaredoxin-S6, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf14591_118825-122048' '(at5g03870 : 251.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT4G10630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38035 : 199.0) no description available & (gnl|cdd|48580 : 179.0) no description available & (reliability: 502.0) & (original description: Putative BnaAnng00840D, Description = BnaAnng00840D protein, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf16127_38505-40810' '(at4g15700 : 140.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G15690.1); Has 1720 Blast hits to 1715 proteins in 241 species: Archae - 0; Bacteria - 36; Metazoa - 499; Fungi - 318; Plants - 755; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|36963 : 128.0) no description available & (gnl|cdd|48634 : 101.0) no description available & (reliability: 280.0) & (original description: Putative GRXS3, Description = Monothiol glutaredoxin-S3, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf17164_160698-164404' '(at5g40370 : 164.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin, eukaryotic/virial (InterPro:IPR011899), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT5G63030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p55143|glrx_ricco : 161.0) Glutaredoxin - Ricinus communis (Castor bean) & (gnl|cdd|36963 : 139.0) no description available & (gnl|cdd|48634 : 136.0) no description available & (reliability: 328.0) & (original description: Putative glr1, Description = Glutaredoxin, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf17477_35870-38175' '(at3g62930 : 135.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G03020.1); Has 1393 Blast hits to 1390 proteins in 224 species: Archae - 0; Bacteria - 15; Metazoa - 320; Fungi - 249; Plants - 741; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|36963 : 112.0) no description available & (gnl|cdd|48634 : 97.9) no description available & (reliability: 270.0) & (original description: Putative GRX1, Description = Glutaredoxin, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf17511_203172-205480' '(at1g03020 : 137.0) Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G62930.1); Has 1690 Blast hits to 1687 proteins in 285 species: Archae - 0; Bacteria - 112; Metazoa - 344; Fungi - 348; Plants - 762; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36963 : 119.0) no description available & (gnl|cdd|48634 : 104.0) no description available & (reliability: 274.0) & (original description: Putative GRXS1, Description = Monothiol glutaredoxin-S1, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf20325_36295-38594' '(at2g47880 : 136.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G62960.1); Has 1229 Blast hits to 1227 proteins in 226 species: Archae - 0; Bacteria - 96; Metazoa - 226; Fungi - 100; Plants - 735; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (gnl|cdd|36963 : 120.0) no description available & (gnl|cdd|48634 : 96.0) no description available & (reliability: 272.0) & (original description: Putative GRXC13, Description = Glutaredoxin-C13, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf22538_11959-14771' '(at5g13810 : 247.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT3G57070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38035 : 205.0) no description available & (gnl|cdd|48580 : 191.0) no description available & (reliability: 494.0) & (original description: Putative Grx, Description = Glutaredoxin, PFAM = PF00462)' T '21.4' 'redox.glutaredoxins' 'niben101scf31742_98245-100658' '(at1g28480 : 134.0) Encodes GRX480, a member of the glutaredoxin family that regulates protein redox state. GRX480 interacts with TGA factors and suppresses JA-responsive PDF1.2 transcription. GRX480 transcription is SA-inducible and requires NPR1. Maybe involved in SA/JA cross-talk.; GRX480; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: salicylic acid mediated signaling pathway, jasmonic acid mediated signaling pathway, response to salicylic acid stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT1G03850.2); Has 774 Blast hits to 772 proteins in 85 species: Archae - 0; Bacteria - 6; Metazoa - 52; Fungi - 18; Plants - 684; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|36963 : 104.0) no description available & (reliability: 268.0) & (original description: Putative GRXC9, Description = Glutaredoxin-C9, PFAM = PF00462)' T '21.5' 'redox.peroxiredoxin' 'nbv0.3scaffold91465_1188-5206' '(at3g26060 : 274.0) encodes periredoxin Q which decomposes peroxides and plays a role in the protection of the photosynthetic apparatus; ATPRX Q; FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, plastoglobule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: 2-cysteine peroxiredoxin B (TAIR:AT5G06290.1). & (gnl|cdd|36073 : 209.0) no description available & (gnl|cdd|48566 : 184.0) no description available & (reliability: 548.0) & (original description: Putative PRXQ, Description = Peroxiredoxin Q, chloroplastic, PFAM = PF00578)' T '21.5' 'redox.peroxiredoxin' 'nbv0.5scaffold1656_403343-406029' '(at3g52960 : 240.0) Thioredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: defense response to bacterium, peptidyl-cysteine S-nitrosylation; LOCATED IN: thylakoid, chloroplast stroma, chloroplast, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740); BEST Arabidopsis thaliana protein match is: thioredoxin-dependent peroxidase 1 (TAIR:AT1G65980.1); Has 4202 Blast hits to 4202 proteins in 933 species: Archae - 58; Bacteria - 1639; Metazoa - 177; Fungi - 321; Plants - 255; Viruses - 0; Other Eukaryotes - 1752 (source: NCBI BLink). & (gnl|cdd|48562 : 210.0) no description available & (gnl|cdd|35761 : 197.0) no description available & (reliability: 480.0) & (original description: Putative PRDX5, Description = Peroxiredoxin 5, atypical 2-Cys peroxiredoxin, PFAM = PF08534)' T '21.5' 'redox.peroxiredoxin' 'niben101ctg12033_1-1429' '(at1g65980 : 140.0) thioredoxin-dependent peroxidase; thioredoxin-dependent peroxidase 1 (TPX1); FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740); BEST Arabidopsis thaliana protein match is: thioredoxin-dependent peroxidase 2 (TAIR:AT1G65970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35761 : 116.0) no description available & (gnl|cdd|48562 : 103.0) no description available & (reliability: 280.0) & (original description: Putative PRXIIB, Description = Peroxiredoxin-2B, PFAM = PF08534)' T '21.5' 'redox.peroxiredoxin' 'niben101scf01520_829511-833973' '(at3g06050 : 288.0) Encodes a mitochondrial matrix localized peroxiredoxin involved in redox homeostasis. Knockout mutants have reduced root growth under certain oxidative stress conditions.; peroxiredoxin IIF (PRXIIF); FUNCTIONS IN: peroxidase activity, antioxidant activity; INVOLVED IN: response to oxidative stress, response to cadmium ion; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G60740.1); Has 3925 Blast hits to 3925 proteins in 881 species: Archae - 6; Bacteria - 1549; Metazoa - 168; Fungi - 305; Plants - 221; Viruses - 0; Other Eukaryotes - 1676 (source: NCBI BLink). & (gnl|cdd|35761 : 195.0) no description available & (gnl|cdd|48562 : 189.0) no description available & (reliability: 576.0) & (original description: Putative PRXIIF, Description = Peroxiredoxin-2F, mitochondrial, PFAM = PF08534)' T '21.5' 'redox.peroxiredoxin' 'niben101scf03671_213740-219964' '(at3g06050 : 286.0) Encodes a mitochondrial matrix localized peroxiredoxin involved in redox homeostasis. Knockout mutants have reduced root growth under certain oxidative stress conditions.; peroxiredoxin IIF (PRXIIF); FUNCTIONS IN: peroxidase activity, antioxidant activity; INVOLVED IN: response to oxidative stress, response to cadmium ion; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G60740.1); Has 3925 Blast hits to 3925 proteins in 881 species: Archae - 6; Bacteria - 1549; Metazoa - 168; Fungi - 305; Plants - 221; Viruses - 0; Other Eukaryotes - 1676 (source: NCBI BLink). & (gnl|cdd|35761 : 195.0) no description available & (gnl|cdd|48562 : 190.0) no description available & (reliability: 572.0) & (original description: Putative PRXIIF, Description = Peroxiredoxin-2F, mitochondrial, PFAM = PF08534)' T '21.5' 'redox.peroxiredoxin' 'niben101scf03711_244945-276755' '(at1g65980 : 277.0) thioredoxin-dependent peroxidase; thioredoxin-dependent peroxidase 1 (TPX1); FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740); BEST Arabidopsis thaliana protein match is: thioredoxin-dependent peroxidase 2 (TAIR:AT1G65970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35761 : 225.0) no description available & (gnl|cdd|48562 : 207.0) no description available & (reliability: 554.0) & (original description: Putative PRXIIB, Description = Peroxiredoxin-2B, PFAM = PF08534)' T '21.5' 'redox.peroxiredoxin' 'niben101scf03991_81442-84116' '(at3g52960 : 241.0) Thioredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: defense response to bacterium, peptidyl-cysteine S-nitrosylation; LOCATED IN: thylakoid, chloroplast stroma, chloroplast, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740); BEST Arabidopsis thaliana protein match is: thioredoxin-dependent peroxidase 1 (TAIR:AT1G65980.1); Has 4202 Blast hits to 4202 proteins in 933 species: Archae - 58; Bacteria - 1639; Metazoa - 177; Fungi - 321; Plants - 255; Viruses - 0; Other Eukaryotes - 1752 (source: NCBI BLink). & (gnl|cdd|48562 : 212.0) no description available & (gnl|cdd|35761 : 202.0) no description available & (reliability: 482.0) & (original description: Putative PRXIIE, Description = Peroxiredoxin-2E, chloroplastic, PFAM = PF08534)' T '21.5' 'redox.peroxiredoxin' 'niben101scf05392_116082-118768' '(at3g52960 : 234.0) Thioredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: defense response to bacterium, peptidyl-cysteine S-nitrosylation; LOCATED IN: thylakoid, chloroplast stroma, chloroplast, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740); BEST Arabidopsis thaliana protein match is: thioredoxin-dependent peroxidase 1 (TAIR:AT1G65980.1); Has 4202 Blast hits to 4202 proteins in 933 species: Archae - 58; Bacteria - 1639; Metazoa - 177; Fungi - 321; Plants - 255; Viruses - 0; Other Eukaryotes - 1752 (source: NCBI BLink). & (gnl|cdd|48562 : 209.0) no description available & (gnl|cdd|35761 : 196.0) no description available & (reliability: 468.0) & (original description: Putative ahpC, Description = Peroxiredoxin, PFAM = PF08534)' T '21.5' 'redox.peroxiredoxin' 'niben101scf05682_77391-81094' '(at3g26060 : 270.0) encodes periredoxin Q which decomposes peroxides and plays a role in the protection of the photosynthetic apparatus; ATPRX Q; FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, plastoglobule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: 2-cysteine peroxiredoxin B (TAIR:AT5G06290.1). & (gnl|cdd|36073 : 206.0) no description available & (gnl|cdd|48566 : 181.0) no description available & (reliability: 540.0) & (original description: Putative bcp, Description = Putative thiol peroxidase, PFAM = PF00578)' T '21.5' 'redox.peroxiredoxin' 'niben101scf06739_189652-198365' '(at3g26060 : 269.0) encodes periredoxin Q which decomposes peroxides and plays a role in the protection of the photosynthetic apparatus; ATPRX Q; FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, plastoglobule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: 2-cysteine peroxiredoxin B (TAIR:AT5G06290.1). & (gnl|cdd|36073 : 206.0) no description available & (gnl|cdd|48566 : 176.0) no description available & (reliability: 538.0) & (original description: Putative prxQ, Description = Peroxiredoxin Q, thioredoxin dependent peroxidase chloroplast, PFAM = PF00578)' T '21.5' 'redox.peroxiredoxin' 'niben101scf08562_52793-55470' '(at3g52960 : 241.0) Thioredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: defense response to bacterium, peptidyl-cysteine S-nitrosylation; LOCATED IN: thylakoid, chloroplast stroma, chloroplast, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740); BEST Arabidopsis thaliana protein match is: thioredoxin-dependent peroxidase 1 (TAIR:AT1G65980.1); Has 4202 Blast hits to 4202 proteins in 933 species: Archae - 58; Bacteria - 1639; Metazoa - 177; Fungi - 321; Plants - 255; Viruses - 0; Other Eukaryotes - 1752 (source: NCBI BLink). & (gnl|cdd|48562 : 211.0) no description available & (gnl|cdd|35761 : 200.0) no description available & (reliability: 482.0) & (original description: Putative prx5, Description = Peroxiredoxin, type II, PFAM = PF08534)' T '21.5.1' 'redox.peroxiredoxin.BAS1' 'nbv0.3scaffold9176_2211-10381' '(at5g06290 : 229.0) Encodes a 2-Cys peroxiredoxin (2-Cys PrxB) that contains two catalytic Cys residues.; 2-cysteine peroxiredoxin B (2-Cys Prx B); FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: response to cold, defense response to bacterium; LOCATED IN: apoplast, stromule, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peroxiredoxin, C-terminal (InterPro:IPR019479), Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G11630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q96468|bas1_horvu : 228.0) 2-cys peroxiredoxin BAS1, chloroplast precursor (EC 1.11.1.15) (Thiol-specific antioxidant protein) (Fragment) - Hordeum vulgare (Barley) & (gnl|cdd|36070 : 182.0) no description available & (gnl|cdd|48564 : 173.0) no description available & (reliability: 458.0) & (original description: Putative ahpC, Description = Peroxiredoxin, PFAM = PF00578;PF10417)' T '21.5.1' 'redox.peroxiredoxin.BAS1' 'niben044scf00026425ctg017_330-7377' '(at5g06290 : 376.0) Encodes a 2-Cys peroxiredoxin (2-Cys PrxB) that contains two catalytic Cys residues.; 2-cysteine peroxiredoxin B (2-Cys Prx B); FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: response to cold, defense response to bacterium; LOCATED IN: apoplast, stromule, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peroxiredoxin, C-terminal (InterPro:IPR019479), Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G11630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q96468|bas1_horvu : 362.0) 2-cys peroxiredoxin BAS1, chloroplast precursor (EC 1.11.1.15) (Thiol-specific antioxidant protein) (Fragment) - Hordeum vulgare (Barley) & (gnl|cdd|48564 : 297.0) no description available & (gnl|cdd|36070 : 290.0) no description available & (reliability: 752.0) & (original description: Putative BAS1, Description = 2-Cys peroxiredoxin BAS1, chloroplastic, PFAM = PF10417;PF00578)' T '21.5.1' 'redox.peroxiredoxin.BAS1' 'niben044scf00044024ctg001_3240-12494' '(at5g06290 : 377.0) Encodes a 2-Cys peroxiredoxin (2-Cys PrxB) that contains two catalytic Cys residues.; 2-cysteine peroxiredoxin B (2-Cys Prx B); FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: response to cold, defense response to bacterium; LOCATED IN: apoplast, stromule, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peroxiredoxin, C-terminal (InterPro:IPR019479), Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G11630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q96468|bas1_horvu : 365.0) 2-cys peroxiredoxin BAS1, chloroplast precursor (EC 1.11.1.15) (Thiol-specific antioxidant protein) (Fragment) - Hordeum vulgare (Barley) & (gnl|cdd|48564 : 295.0) no description available & (gnl|cdd|36070 : 289.0) no description available & (reliability: 754.0) & (original description: Putative BAS1, Description = 2-Cys peroxiredoxin BAS1, chloroplastic, PFAM = PF10417;PF00578)' T '21.5.1' 'redox.peroxiredoxin.BAS1' 'niben101scf01372_42186-49195' '(at5g06290 : 378.0) Encodes a 2-Cys peroxiredoxin (2-Cys PrxB) that contains two catalytic Cys residues.; 2-cysteine peroxiredoxin B (2-Cys Prx B); FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: response to cold, defense response to bacterium; LOCATED IN: apoplast, stromule, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peroxiredoxin, C-terminal (InterPro:IPR019479), Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G11630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q96468|bas1_horvu : 367.0) 2-cys peroxiredoxin BAS1, chloroplast precursor (EC 1.11.1.15) (Thiol-specific antioxidant protein) (Fragment) - Hordeum vulgare (Barley) & (gnl|cdd|48564 : 297.0) no description available & (gnl|cdd|36070 : 289.0) no description available & (reliability: 756.0) & (original description: Putative BAS1, Description = 2-Cys peroxiredoxin BAS1, chloroplastic, PFAM = PF00578;PF10417)' T '21.5.1' 'redox.peroxiredoxin.BAS1' 'niben101scf04717_340989-357579' '(at5g06290 : 388.0) Encodes a 2-Cys peroxiredoxin (2-Cys PrxB) that contains two catalytic Cys residues.; 2-cysteine peroxiredoxin B (2-Cys Prx B); FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: response to cold, defense response to bacterium; LOCATED IN: apoplast, stromule, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peroxiredoxin, C-terminal (InterPro:IPR019479), Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G11630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q96468|bas1_horvu : 380.0) 2-cys peroxiredoxin BAS1, chloroplast precursor (EC 1.11.1.15) (Thiol-specific antioxidant protein) (Fragment) - Hordeum vulgare (Barley) & (gnl|cdd|48564 : 298.0) no description available & (gnl|cdd|36070 : 289.0) no description available & (reliability: 776.0) & (original description: Putative bas1, Description = Thiol-specific antioxidant protein, PFAM = PF00578;PF10417)' T '21.5.1' 'redox.peroxiredoxin.BAS1' 'niben101scf08020_139881-148041' '(at5g06290 : 388.0) Encodes a 2-Cys peroxiredoxin (2-Cys PrxB) that contains two catalytic Cys residues.; 2-cysteine peroxiredoxin B (2-Cys Prx B); FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: response to cold, defense response to bacterium; LOCATED IN: apoplast, stromule, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peroxiredoxin, C-terminal (InterPro:IPR019479), Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G11630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q96468|bas1_horvu : 378.0) 2-cys peroxiredoxin BAS1, chloroplast precursor (EC 1.11.1.15) (Thiol-specific antioxidant protein) (Fragment) - Hordeum vulgare (Barley) & (gnl|cdd|48564 : 300.0) no description available & (gnl|cdd|36070 : 290.0) no description available & (reliability: 776.0) & (original description: Putative TSA, Description = 2-Cys peroxiredoxin BAS1, chloroplastic, PFAM = PF10417;PF00578)' T '21.5.2' 'redox.peroxiredoxin.PER1' '' '' '21.6' 'redox.dismutases and catalases' 'nbv0.3scaffold3808_57750-70586' '(at5g23310 : 384.0) Fe superoxide dismutase; Fe superoxide dismutase 3 (FSD3); FUNCTIONS IN: superoxide dismutase activity; INVOLVED IN: removal of superoxide radicals; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal (InterPro:IPR019831), Manganese/iron superoxide dismutase (InterPro:IPR001189), Manganese/iron superoxide dismutase, C-terminal (InterPro:IPR019832), Manganese/iron superoxide dismutase, binding site (InterPro:IPR019833); BEST Arabidopsis thaliana protein match is: Fe superoxide dismutase 2 (TAIR:AT5G51100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36094 : 235.0) no description available & (p22302|sodf_nicpl : 234.0) Superoxide dismutase [Fe], chloroplast (EC 1.15.1.1) (Fragment) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|30950 : 209.0) no description available & (reliability: 768.0) & (original description: Putative FSD3, Description = Superoxide dismutase [Fe] 3, chloroplastic, PFAM = PF00081;PF02777)' T '21.6' 'redox.dismutases and catalases' 'nbv0.3scaffold67971_4237-9767' '(at1g12520 : 364.0) Copper/zinc superoxide dismutase copper chaperone. Localized to the chloroplast. Expressed in roots and shoots. Up-regulated in response to copper and senescence. The AtACC activates all three CuZnSOD activities located in three different subcellular compartments. Contains three domains, central, ATX-1 like and C-terminal. ATX-1 like domain essential for the copper chaperone function of AtCCS in planta.; copper chaperone for SOD1 (CCS); FUNCTIONS IN: superoxide dismutase copper chaperone activity, superoxide dismutase activity; INVOLVED IN: cellular copper ion homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Superoxide dismutase, copper/zinc binding (InterPro:IPR001424); BEST Arabidopsis thaliana protein match is: copper/zinc superoxide dismutase 2 (TAIR:AT2G28190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39855 : 280.0) no description available & (reliability: 728.0) & (original description: Putative CCS, Description = Copper chaperone for superoxide dismutase, chloroplastic/cytosolic, PFAM = PF00403;PF00080)' T '21.6' 'redox.dismutases and catalases' 'nbv0.3scaffold69813_2881-9344' '(p10792|sodcp_pethy : 291.0) Superoxide dismutase [Cu-Zn], chloroplast precursor (EC 1.15.1.1) - Petunia hybrida (Petunia) & (at2g28190 : 246.0) Encodes a chloroplastic copper/zinc superoxide dismutase CSD2 that can detoxify superoxide radicals. Its expression is affected by miR398-directed mRNA cleavage.; copper/zinc superoxide dismutase 2 (CSD2); FUNCTIONS IN: superoxide dismutase activity; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Superoxide dismutase, copper/zinc, binding site (InterPro:IPR018152), Superoxide dismutase, copper/zinc binding (InterPro:IPR001424); BEST Arabidopsis thaliana protein match is: copper/zinc superoxide dismutase 1 (TAIR:AT1G08830.2); Has 4720 Blast hits to 4704 proteins in 1488 species: Archae - 6; Bacteria - 1989; Metazoa - 1257; Fungi - 323; Plants - 669; Viruses - 141; Other Eukaryotes - 335 (source: NCBI BLink). & (gnl|cdd|84499 : 232.0) no description available & (gnl|cdd|35662 : 195.0) no description available & (reliability: 492.0) & (original description: Putative SODCP, Description = Superoxide dismutase [Cu-Zn], chloroplastic, PFAM = PF00080)' T '21.6' 'redox.dismutases and catalases' 'nbv0.3scaffold93519_1-4867' '(p49315|cata1_nicpl : 939.0) Catalase isozyme 1 (EC 1.11.1.6) (Fragment) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at4g35090 : 860.0) Encodes a peroxisomal catalase, highly expressed in bolts and leaves. mRNA expression patterns show circadian regulation with mRNA levels being high in the subjective early morning. Loss of function mutations have increased H2O2 levels and increased H2O2 sensitivity. Mutants accumulate more toxic ions yet show decreased sensitivity to Li+. This decreased sensitivity is most likely due to an insensitivity to ethylene. Note that in Queval et al. (2007) Plant Journal, 52(4):640, SALK_057998 is named as cat2-1, SALK_076998 is named as cat2-2; in Bueso et al. (2007) Plant Journal, 52(6):1052, SALK_076998 is named as cat2-1. TAIR has adopted the nomenclature consistent with that in Bueso et al. (2007) after consultation with the authors: SALK_076998 (cat2-1), SALK_057998 (cat2-2).; catalase 2 (CAT2); FUNCTIONS IN: protein binding, catalase activity, cobalt ion binding; INVOLVED IN: in 10 processes; LOCATED IN: mitochondrion, cytosolic ribosome, stromule, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 1 (TAIR:AT1G20630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29422 : 703.0) no description available & (gnl|cdd|35270 : 686.0) no description available & (reliability: 1720.0) & (original description: Putative CAT2, Description = Catalase isozyme 2, PFAM = PF00199;PF06628)' T '21.6' 'redox.dismutases and catalases' 'niben044ctg26053601_1-2253' '(p27082|sodc_nicpl : 214.0) Superoxide dismutase [Cu-Zn] (EC 1.15.1.1) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g08830 : 184.0) Encodes a cytosolic copper/zinc superoxide dismutase CSD1 that can detoxify superoxide radicals. Its expression is affected by miR398-directed mRNA cleavage. Regulated by biotic and abiotic stress.; copper/zinc superoxide dismutase 1 (CSD1); CONTAINS InterPro DOMAIN/s: Superoxide dismutase, copper/zinc, binding site (InterPro:IPR018152), Superoxide dismutase, copper/zinc binding (InterPro:IPR001424); BEST Arabidopsis thaliana protein match is: copper/zinc superoxide dismutase 2 (TAIR:AT2G28190.1); Has 4705 Blast hits to 4689 proteins in 1491 species: Archae - 6; Bacteria - 2000; Metazoa - 1249; Fungi - 303; Plants - 666; Viruses - 142; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84499 : 177.0) no description available & (gnl|cdd|35662 : 153.0) no description available & (reliability: 368.0) & (original description: Putative sod, Description = Superoxide dismutase [Cu-Zn], PFAM = PF00080)' T '21.6' 'redox.dismutases and catalases' 'niben044scf00001673ctg013_30-5348' '(at1g12520 : 362.0) Copper/zinc superoxide dismutase copper chaperone. Localized to the chloroplast. Expressed in roots and shoots. Up-regulated in response to copper and senescence. The AtACC activates all three CuZnSOD activities located in three different subcellular compartments. Contains three domains, central, ATX-1 like and C-terminal. ATX-1 like domain essential for the copper chaperone function of AtCCS in planta.; copper chaperone for SOD1 (CCS); FUNCTIONS IN: superoxide dismutase copper chaperone activity, superoxide dismutase activity; INVOLVED IN: cellular copper ion homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Superoxide dismutase, copper/zinc binding (InterPro:IPR001424); BEST Arabidopsis thaliana protein match is: copper/zinc superoxide dismutase 2 (TAIR:AT2G28190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39855 : 281.0) no description available & (reliability: 724.0) & (original description: Putative CCS, Description = Copper chaperone for superoxide dismutase, chloroplastic/cytosolic, PFAM = PF00403;PF00080)' T '21.6' 'redox.dismutases and catalases' 'niben044scf00008842ctg000_3136-17942' '(at5g23310 : 366.0) Fe superoxide dismutase; Fe superoxide dismutase 3 (FSD3); FUNCTIONS IN: superoxide dismutase activity; INVOLVED IN: removal of superoxide radicals; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal (InterPro:IPR019831), Manganese/iron superoxide dismutase (InterPro:IPR001189), Manganese/iron superoxide dismutase, C-terminal (InterPro:IPR019832), Manganese/iron superoxide dismutase, binding site (InterPro:IPR019833); BEST Arabidopsis thaliana protein match is: Fe superoxide dismutase 2 (TAIR:AT5G51100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p22302|sodf_nicpl : 218.0) Superoxide dismutase [Fe], chloroplast (EC 1.15.1.1) (Fragment) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|36094 : 218.0) no description available & (gnl|cdd|30950 : 193.0) no description available & (reliability: 732.0) & (original description: Putative FSD3, Description = Superoxide dismutase [Fe] 3, chloroplastic, PFAM = PF00081;PF02777)' T '21.6' 'redox.dismutases and catalases' 'niben101scf00163_806548-810838' '(at5g51100 : 320.0) Fe superoxide dismutase whose mRNA levels are increased in response to exposure to UV-B.; Fe superoxide dismutase 2 (FSD2); FUNCTIONS IN: superoxide dismutase activity; INVOLVED IN: response to UV; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal (InterPro:IPR019831), Manganese/iron superoxide dismutase (InterPro:IPR001189), Manganese/iron superoxide dismutase, C-terminal (InterPro:IPR019832), Manganese/iron superoxide dismutase, binding site (InterPro:IPR019833); BEST Arabidopsis thaliana protein match is: Fe superoxide dismutase 1 (TAIR:AT4G25100.5); Has 11522 Blast hits to 11521 proteins in 3361 species: Archae - 194; Bacteria - 8106; Metazoa - 433; Fungi - 799; Plants - 399; Viruses - 1; Other Eukaryotes - 1590 (source: NCBI BLink). & (p22302|sodf_nicpl : 311.0) Superoxide dismutase [Fe], chloroplast (EC 1.15.1.1) (Fragment) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|36094 : 244.0) no description available & (gnl|cdd|30950 : 240.0) no description available & (reliability: 640.0) & (original description: Putative sodb, Description = Superoxide dismutase, PFAM = PF02777;PF00081)' T '21.6' 'redox.dismutases and catalases' 'niben101scf00484_89016-93929' '(o49044|sodc2_mescr : 216.0) Superoxide dismutase [Cu-Zn] 2 (EC 1.15.1.1) - Mesembryanthemum crystallinum (Common ice plant) & (at5g18100 : 196.0) A putative peroxisomal CuZnSOD inducible by a high-light pulse.; copper/zinc superoxide dismutase 3 (CSD3); FUNCTIONS IN: superoxide dismutase activity; INVOLVED IN: response to oxidative stress, oxygen and reactive oxygen species metabolic process, removal of superoxide radicals; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Superoxide dismutase, copper/zinc binding (InterPro:IPR001424); BEST Arabidopsis thaliana protein match is: copper/zinc superoxide dismutase 2 (TAIR:AT2G28190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84499 : 191.0) no description available & (gnl|cdd|35662 : 169.0) no description available & (reliability: 392.0) & (original description: Putative sod, Description = Superoxide dismutase [Cu-Zn], PFAM = PF00080)' T '21.6' 'redox.dismutases and catalases' 'niben101scf00712_1547617-1555669' '(p49317|cata3_nicpl : 1005.0) Catalase isozyme 3 (EC 1.11.1.6) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at4g35090 : 942.0) Encodes a peroxisomal catalase, highly expressed in bolts and leaves. mRNA expression patterns show circadian regulation with mRNA levels being high in the subjective early morning. Loss of function mutations have increased H2O2 levels and increased H2O2 sensitivity. Mutants accumulate more toxic ions yet show decreased sensitivity to Li+. This decreased sensitivity is most likely due to an insensitivity to ethylene. Note that in Queval et al. (2007) Plant Journal, 52(4):640, SALK_057998 is named as cat2-1, SALK_076998 is named as cat2-2; in Bueso et al. (2007) Plant Journal, 52(6):1052, SALK_076998 is named as cat2-1. TAIR has adopted the nomenclature consistent with that in Bueso et al. (2007) after consultation with the authors: SALK_076998 (cat2-1), SALK_057998 (cat2-2).; catalase 2 (CAT2); FUNCTIONS IN: protein binding, catalase activity, cobalt ion binding; INVOLVED IN: in 10 processes; LOCATED IN: mitochondrion, cytosolic ribosome, stromule, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 1 (TAIR:AT1G20630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29422 : 745.0) no description available & (gnl|cdd|35270 : 736.0) no description available & (reliability: 1884.0) & (original description: Putative CAT3, Description = Catalase isozyme 3, PFAM = PF06628;PF00199)' T '21.6' 'redox.dismutases and catalases' 'niben101scf00860_372210-377010' '(p22302|sodf_nicpl : 401.0) Superoxide dismutase [Fe], chloroplast (EC 1.15.1.1) (Fragment) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g51100 : 309.0) Fe superoxide dismutase whose mRNA levels are increased in response to exposure to UV-B.; Fe superoxide dismutase 2 (FSD2); FUNCTIONS IN: superoxide dismutase activity; INVOLVED IN: response to UV; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal (InterPro:IPR019831), Manganese/iron superoxide dismutase (InterPro:IPR001189), Manganese/iron superoxide dismutase, C-terminal (InterPro:IPR019832), Manganese/iron superoxide dismutase, binding site (InterPro:IPR019833); BEST Arabidopsis thaliana protein match is: Fe superoxide dismutase 1 (TAIR:AT4G25100.5); Has 11522 Blast hits to 11521 proteins in 3361 species: Archae - 194; Bacteria - 8106; Metazoa - 433; Fungi - 799; Plants - 399; Viruses - 1; Other Eukaryotes - 1590 (source: NCBI BLink). & (gnl|cdd|36094 : 249.0) no description available & (gnl|cdd|30950 : 248.0) no description available & (reliability: 618.0) & (original description: Putative sodb, Description = Superoxide dismutase, PFAM = PF00081;PF02777)' T '21.6' 'redox.dismutases and catalases' 'niben101scf01237_1307350-1313704' '(p11796|sodm_nicpl : 419.0) Superoxide dismutase [Mn], mitochondrial precursor (EC 1.15.1.1) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g10920 : 369.0) manganese superoxide dismutase (MSD1); manganese superoxide dismutase 1 (MSD1); FUNCTIONS IN: superoxide dismutase activity, copper ion binding, metal ion binding; INVOLVED IN: response to zinc ion, response to salt stress, defense response to bacterium, removal of superoxide radicals, embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal (InterPro:IPR019831), Manganese/iron superoxide dismutase (InterPro:IPR001189), Manganese/iron superoxide dismutase, C-terminal (InterPro:IPR019832), Manganese/iron superoxide dismutase, binding site (InterPro:IPR019833); BEST Arabidopsis thaliana protein match is: Iron/manganese superoxide dismutase family protein (TAIR:AT3G56350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36094 : 266.0) no description available & (gnl|cdd|30950 : 236.0) no description available & (reliability: 738.0) & (original description: Putative SODA, Description = Superoxide dismutase [Mn], mitochondrial, PFAM = PF00081;PF02777)' T '21.6' 'redox.dismutases and catalases' 'niben101scf01497_282907-288923' '(p49315|cata1_nicpl : 1000.0) Catalase isozyme 1 (EC 1.11.1.6) (Fragment) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at4g35090 : 923.0) Encodes a peroxisomal catalase, highly expressed in bolts and leaves. mRNA expression patterns show circadian regulation with mRNA levels being high in the subjective early morning. Loss of function mutations have increased H2O2 levels and increased H2O2 sensitivity. Mutants accumulate more toxic ions yet show decreased sensitivity to Li+. This decreased sensitivity is most likely due to an insensitivity to ethylene. Note that in Queval et al. (2007) Plant Journal, 52(4):640, SALK_057998 is named as cat2-1, SALK_076998 is named as cat2-2; in Bueso et al. (2007) Plant Journal, 52(6):1052, SALK_076998 is named as cat2-1. TAIR has adopted the nomenclature consistent with that in Bueso et al. (2007) after consultation with the authors: SALK_076998 (cat2-1), SALK_057998 (cat2-2).; catalase 2 (CAT2); FUNCTIONS IN: protein binding, catalase activity, cobalt ion binding; INVOLVED IN: in 10 processes; LOCATED IN: mitochondrion, cytosolic ribosome, stromule, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 1 (TAIR:AT1G20630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29422 : 735.0) no description available & (gnl|cdd|35270 : 725.0) no description available & (reliability: 1846.0) & (original description: Putative CAT2, Description = Catalase isozyme 2, PFAM = PF06628;PF00199)' T '21.6' 'redox.dismutases and catalases' 'niben101scf03631_56616-62166' '(p49317|cata3_nicpl : 997.0) Catalase isozyme 3 (EC 1.11.1.6) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at4g35090 : 937.0) Encodes a peroxisomal catalase, highly expressed in bolts and leaves. mRNA expression patterns show circadian regulation with mRNA levels being high in the subjective early morning. Loss of function mutations have increased H2O2 levels and increased H2O2 sensitivity. Mutants accumulate more toxic ions yet show decreased sensitivity to Li+. This decreased sensitivity is most likely due to an insensitivity to ethylene. Note that in Queval et al. (2007) Plant Journal, 52(4):640, SALK_057998 is named as cat2-1, SALK_076998 is named as cat2-2; in Bueso et al. (2007) Plant Journal, 52(6):1052, SALK_076998 is named as cat2-1. TAIR has adopted the nomenclature consistent with that in Bueso et al. (2007) after consultation with the authors: SALK_076998 (cat2-1), SALK_057998 (cat2-2).; catalase 2 (CAT2); FUNCTIONS IN: protein binding, catalase activity, cobalt ion binding; INVOLVED IN: in 10 processes; LOCATED IN: mitochondrion, cytosolic ribosome, stromule, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 1 (TAIR:AT1G20630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29422 : 746.0) no description available & (gnl|cdd|35270 : 739.0) no description available & (reliability: 1874.0) & (original description: Putative CAT3, Description = Catalase isozyme 3, PFAM = PF00199;PF06628)' T '21.6' 'redox.dismutases and catalases' 'niben101scf03679_369444-373914' '(p22302|sodf_nicpl : 377.0) Superoxide dismutase [Fe], chloroplast (EC 1.15.1.1) (Fragment) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g51100 : 291.0) Fe superoxide dismutase whose mRNA levels are increased in response to exposure to UV-B.; Fe superoxide dismutase 2 (FSD2); FUNCTIONS IN: superoxide dismutase activity; INVOLVED IN: response to UV; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal (InterPro:IPR019831), Manganese/iron superoxide dismutase (InterPro:IPR001189), Manganese/iron superoxide dismutase, C-terminal (InterPro:IPR019832), Manganese/iron superoxide dismutase, binding site (InterPro:IPR019833); BEST Arabidopsis thaliana protein match is: Fe superoxide dismutase 1 (TAIR:AT4G25100.5); Has 11522 Blast hits to 11521 proteins in 3361 species: Archae - 194; Bacteria - 8106; Metazoa - 433; Fungi - 799; Plants - 399; Viruses - 1; Other Eukaryotes - 1590 (source: NCBI BLink). & (gnl|cdd|30950 : 258.0) no description available & (gnl|cdd|36094 : 256.0) no description available & (reliability: 582.0) & (original description: Putative sodb, Description = Superoxide dismutase, PFAM = PF00081;PF02777)' T '21.6' 'redox.dismutases and catalases' 'niben101scf03712_139250-151165' '(at5g23310 : 383.0) Fe superoxide dismutase; Fe superoxide dismutase 3 (FSD3); FUNCTIONS IN: superoxide dismutase activity; INVOLVED IN: removal of superoxide radicals; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal (InterPro:IPR019831), Manganese/iron superoxide dismutase (InterPro:IPR001189), Manganese/iron superoxide dismutase, C-terminal (InterPro:IPR019832), Manganese/iron superoxide dismutase, binding site (InterPro:IPR019833); BEST Arabidopsis thaliana protein match is: Fe superoxide dismutase 2 (TAIR:AT5G51100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36094 : 236.0) no description available & (p22302|sodf_nicpl : 234.0) Superoxide dismutase [Fe], chloroplast (EC 1.15.1.1) (Fragment) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|30950 : 210.0) no description available & (reliability: 766.0) & (original description: Putative fsd1, Description = Superoxide dismutase, PFAM = PF00081;PF02777)' T '21.6' 'redox.dismutases and catalases' 'niben101scf04926_413126-417674' '(at5g51100 : 313.0) Fe superoxide dismutase whose mRNA levels are increased in response to exposure to UV-B.; Fe superoxide dismutase 2 (FSD2); FUNCTIONS IN: superoxide dismutase activity; INVOLVED IN: response to UV; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal (InterPro:IPR019831), Manganese/iron superoxide dismutase (InterPro:IPR001189), Manganese/iron superoxide dismutase, C-terminal (InterPro:IPR019832), Manganese/iron superoxide dismutase, binding site (InterPro:IPR019833); BEST Arabidopsis thaliana protein match is: Fe superoxide dismutase 1 (TAIR:AT4G25100.5); Has 11522 Blast hits to 11521 proteins in 3361 species: Archae - 194; Bacteria - 8106; Metazoa - 433; Fungi - 799; Plants - 399; Viruses - 1; Other Eukaryotes - 1590 (source: NCBI BLink). & (p28759|sodf_soybn : 300.0) Superoxide dismutase [Fe], chloroplast precursor (EC 1.15.1.1) - Glycine max (Soybean) & (gnl|cdd|36094 : 252.0) no description available & (gnl|cdd|30950 : 245.0) no description available & (reliability: 626.0) & (original description: Putative FSD2, Description = Superoxide dismutase [Fe] 2, chloroplastic, PFAM = PF00081;PF02777)' T '21.6' 'redox.dismutases and catalases' 'niben101scf05395_357785-365859' '(p49317|cata3_nicpl : 957.0) Catalase isozyme 3 (EC 1.11.1.6) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at4g35090 : 916.0) Encodes a peroxisomal catalase, highly expressed in bolts and leaves. mRNA expression patterns show circadian regulation with mRNA levels being high in the subjective early morning. Loss of function mutations have increased H2O2 levels and increased H2O2 sensitivity. Mutants accumulate more toxic ions yet show decreased sensitivity to Li+. This decreased sensitivity is most likely due to an insensitivity to ethylene. Note that in Queval et al. (2007) Plant Journal, 52(4):640, SALK_057998 is named as cat2-1, SALK_076998 is named as cat2-2; in Bueso et al. (2007) Plant Journal, 52(6):1052, SALK_076998 is named as cat2-1. TAIR has adopted the nomenclature consistent with that in Bueso et al. (2007) after consultation with the authors: SALK_076998 (cat2-1), SALK_057998 (cat2-2).; catalase 2 (CAT2); FUNCTIONS IN: protein binding, catalase activity, cobalt ion binding; INVOLVED IN: in 10 processes; LOCATED IN: mitochondrion, cytosolic ribosome, stromule, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 1 (TAIR:AT1G20630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29422 : 729.0) no description available & (gnl|cdd|35270 : 719.0) no description available & (reliability: 1832.0) & (original description: Putative CAT3, Description = Catalase isozyme 3, PFAM = PF06628;PF00199)' T '21.6' 'redox.dismutases and catalases' 'niben101scf06799_161338-165290' '(p10792|sodcp_pethy : 254.0) Superoxide dismutase [Cu-Zn], chloroplast precursor (EC 1.15.1.1) - Petunia hybrida (Petunia) & (at2g28190 : 231.0) Encodes a chloroplastic copper/zinc superoxide dismutase CSD2 that can detoxify superoxide radicals. Its expression is affected by miR398-directed mRNA cleavage.; copper/zinc superoxide dismutase 2 (CSD2); FUNCTIONS IN: superoxide dismutase activity; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Superoxide dismutase, copper/zinc, binding site (InterPro:IPR018152), Superoxide dismutase, copper/zinc binding (InterPro:IPR001424); BEST Arabidopsis thaliana protein match is: copper/zinc superoxide dismutase 1 (TAIR:AT1G08830.2); Has 4720 Blast hits to 4704 proteins in 1488 species: Archae - 6; Bacteria - 1989; Metazoa - 1257; Fungi - 323; Plants - 669; Viruses - 141; Other Eukaryotes - 335 (source: NCBI BLink). & (gnl|cdd|84499 : 228.0) no description available & (gnl|cdd|35662 : 190.0) no description available & (reliability: 462.0) & (original description: Putative sod1, Description = Superoxide dismutase [Cu-Zn], PFAM = PF00080)' T '21.6' 'redox.dismutases and catalases' 'niben101scf06912_200988-206079' '(at1g12520 : 346.0) Copper/zinc superoxide dismutase copper chaperone. Localized to the chloroplast. Expressed in roots and shoots. Up-regulated in response to copper and senescence. The AtACC activates all three CuZnSOD activities located in three different subcellular compartments. Contains three domains, central, ATX-1 like and C-terminal. ATX-1 like domain essential for the copper chaperone function of AtCCS in planta.; copper chaperone for SOD1 (CCS); FUNCTIONS IN: superoxide dismutase copper chaperone activity, superoxide dismutase activity; INVOLVED IN: cellular copper ion homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Superoxide dismutase, copper/zinc binding (InterPro:IPR001424); BEST Arabidopsis thaliana protein match is: copper/zinc superoxide dismutase 2 (TAIR:AT2G28190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39855 : 273.0) no description available & (reliability: 692.0) & (original description: Putative CCS, Description = Putative copper chaperone for Cu/Zn superoxide dismutase, PFAM = PF00080;PF00403)' T '21.6' 'redox.dismutases and catalases' 'niben101scf09401_21343-25756' '(p11796|sodm_nicpl : 458.0) Superoxide dismutase [Mn], mitochondrial precursor (EC 1.15.1.1) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g10920 : 369.0) manganese superoxide dismutase (MSD1); manganese superoxide dismutase 1 (MSD1); FUNCTIONS IN: superoxide dismutase activity, copper ion binding, metal ion binding; INVOLVED IN: response to zinc ion, response to salt stress, defense response to bacterium, removal of superoxide radicals, embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal (InterPro:IPR019831), Manganese/iron superoxide dismutase (InterPro:IPR001189), Manganese/iron superoxide dismutase, C-terminal (InterPro:IPR019832), Manganese/iron superoxide dismutase, binding site (InterPro:IPR019833); BEST Arabidopsis thaliana protein match is: Iron/manganese superoxide dismutase family protein (TAIR:AT3G56350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36094 : 265.0) no description available & (gnl|cdd|30950 : 233.0) no description available & (reliability: 738.0) & (original description: Putative SODA, Description = Superoxide dismutase [Mn], mitochondrial, PFAM = PF00081;PF02777)' T '21.6' 'redox.dismutases and catalases' 'niben101scf11604_133355-138885' '(at1g12520 : 358.0) Copper/zinc superoxide dismutase copper chaperone. Localized to the chloroplast. Expressed in roots and shoots. Up-regulated in response to copper and senescence. The AtACC activates all three CuZnSOD activities located in three different subcellular compartments. Contains three domains, central, ATX-1 like and C-terminal. ATX-1 like domain essential for the copper chaperone function of AtCCS in planta.; copper chaperone for SOD1 (CCS); FUNCTIONS IN: superoxide dismutase copper chaperone activity, superoxide dismutase activity; INVOLVED IN: cellular copper ion homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Superoxide dismutase, copper/zinc binding (InterPro:IPR001424); BEST Arabidopsis thaliana protein match is: copper/zinc superoxide dismutase 2 (TAIR:AT2G28190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39855 : 278.0) no description available & (reliability: 716.0) & (original description: Putative ovg23, Description = Putative copper/zinc superoxide dismutase copper chaperone, PFAM = PF00080;PF00403)' T '21.6' 'redox.dismutases and catalases' 'niben101scf14996_44938-51204' '(p49319|cata1_tobac : 1034.0) Catalase isozyme 1 (EC 1.11.1.6) (Salicylic acid-binding protein) (SABP) - Nicotiana tabacum (Common tobacco) & (at4g35090 : 830.0) Encodes a peroxisomal catalase, highly expressed in bolts and leaves. mRNA expression patterns show circadian regulation with mRNA levels being high in the subjective early morning. Loss of function mutations have increased H2O2 levels and increased H2O2 sensitivity. Mutants accumulate more toxic ions yet show decreased sensitivity to Li+. This decreased sensitivity is most likely due to an insensitivity to ethylene. Note that in Queval et al. (2007) Plant Journal, 52(4):640, SALK_057998 is named as cat2-1, SALK_076998 is named as cat2-2; in Bueso et al. (2007) Plant Journal, 52(6):1052, SALK_076998 is named as cat2-1. TAIR has adopted the nomenclature consistent with that in Bueso et al. (2007) after consultation with the authors: SALK_076998 (cat2-1), SALK_057998 (cat2-2).; catalase 2 (CAT2); FUNCTIONS IN: protein binding, catalase activity, cobalt ion binding; INVOLVED IN: in 10 processes; LOCATED IN: mitochondrion, cytosolic ribosome, stromule, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 1 (TAIR:AT1G20630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29422 : 718.0) no description available & (gnl|cdd|35270 : 683.0) no description available & (reliability: 1660.0) & (original description: Putative cat, Description = Catalase, PFAM = PF00199;PF06628)' T '21.6' 'redox.dismutases and catalases' 'niben101scf23113_145310-156417' '(p11796|sodm_nicpl : 425.0) Superoxide dismutase [Mn], mitochondrial precursor (EC 1.15.1.1) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g10920 : 369.0) manganese superoxide dismutase (MSD1); manganese superoxide dismutase 1 (MSD1); FUNCTIONS IN: superoxide dismutase activity, copper ion binding, metal ion binding; INVOLVED IN: response to zinc ion, response to salt stress, defense response to bacterium, removal of superoxide radicals, embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal (InterPro:IPR019831), Manganese/iron superoxide dismutase (InterPro:IPR001189), Manganese/iron superoxide dismutase, C-terminal (InterPro:IPR019832), Manganese/iron superoxide dismutase, binding site (InterPro:IPR019833); BEST Arabidopsis thaliana protein match is: Iron/manganese superoxide dismutase family protein (TAIR:AT3G56350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36094 : 267.0) no description available & (gnl|cdd|30950 : 239.0) no description available & (reliability: 738.0) & (original description: Putative SODA, Description = Superoxide dismutase [Mn], mitochondrial, PFAM = PF02777;PF00081)' T '21.99' 'redox.misc' 'nbv0.3scaffold408_124582-129445' '(at5g53560 : 218.0) Encodes a cytochrome b5 isoform that can be reduced by AtCBR, a cytochrome b5 reductase.; cytochrome B5 isoform E (CB5-E); FUNCTIONS IN: heme binding; LOCATED IN: chloroplast thylakoid membrane, endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform B (TAIR:AT2G32720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p49098|cyb5_tobac : 191.0) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35757 : 134.0) no description available & (gnl|cdd|84581 : 109.0) no description available & (reliability: 436.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T '21.99' 'redox.misc' 'nbv0.5scaffold1080_619118-624462' '(at5g17770 : 357.0) Encodes NADH:cytochrome (Cyt) b5 reductase that displayed strict specificity to NADH for the reduction of a recombinant Cyt b5 (AtB5-A), whereas no Cyt b5 reduction was observed when NADPH was used as the electron donor.; NADH:cytochrome B5 reductase 1 (CBR); FUNCTIONS IN: cytochrome-b5 reductase activity; INVOLVED IN: electron transport chain; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase (TAIR:AT5G20080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35754 : 247.0) no description available & (p39869|nia_lotja : 164.0) Nitrate reductase [NADH] (EC 1.7.1.1) (NR) - Lotus japonicus & (gnl|cdd|85158 : 123.0) no description available & (reliability: 714.0) & (original description: Putative b5R, Description = NADH-cytochrome b5 reductase, PFAM = PF00175;PF00970)' T '21.99' 'redox.misc' 'niben101scf00225_812657-817425' '(at5g53560 : 224.0) Encodes a cytochrome b5 isoform that can be reduced by AtCBR, a cytochrome b5 reductase.; cytochrome B5 isoform E (CB5-E); FUNCTIONS IN: heme binding; LOCATED IN: chloroplast thylakoid membrane, endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform B (TAIR:AT2G32720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p49098|cyb5_tobac : 197.0) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35757 : 140.0) no description available & (gnl|cdd|84581 : 108.0) no description available & (reliability: 448.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T '21.99' 'redox.misc' 'niben101scf00542_310740-320941' '(at5g20080 : 447.0) FAD/NAD(P)-binding oxidoreductase; FUNCTIONS IN: cytochrome-b5 reductase activity, copper ion binding; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834); BEST Arabidopsis thaliana protein match is: NADH:cytochrome B5 reductase 1 (TAIR:AT5G17770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35754 : 282.0) no description available & (p39865|nia1_phavu : 147.0) Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR-1) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|30889 : 131.0) no description available & (reliability: 894.0) & (original description: Putative CBR2, Description = NADH-cytochrome b5 reductase-like protein, PFAM = PF00175;PF00970)' T '21.99' 'redox.misc' 'niben101scf02427_428016-448042' '(gnl|cdd|35757 : 111.0) no description available & (at5g48810 : 103.0) Encodes a cytochrome b5 isoform that localizes to the ER. The C-terminal portion of the protein appears to be capable of inserting into a plant microsomal membrane in vitro and the protein appears to be subject to glycosylation.; cytochrome B5 isoform D (CB5-D); FUNCTIONS IN: heme binding; INVOLVED IN: defense response to bacterium; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform B (TAIR:AT2G32720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84581 : 98.0) no description available & (p49098|cyb5_tobac : 96.7) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (reliability: 186.4) & (original description: Putative difF, Description = Cytochrome b5 DIF-F, PFAM = PF00173)' T '21.99' 'redox.misc' 'niben101scf03076_142531-146761' '(at1g31170 : 154.0) encodes a cysteine-sulfinic acid reductase (sulfiredoxin - EC 1.8.98.2) capable of reducing overoxidized plastidic 2-Cys-Prx involved in peroxide detoxification and response to oxidative stress; sulfiredoxin (SRX); CONTAINS InterPro DOMAIN/s: ParB-like nuclease (InterPro:IPR003115). & (gnl|cdd|38598 : 125.0) no description available & (reliability: 308.0) & (original description: Putative SRX, Description = Sulfiredoxin, chloroplastic/mitochondrial, PFAM = PF02195)' T '21.99' 'redox.misc' 'niben101scf03488_929737-935650' '(p49098|cyb5_tobac : 125.0) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (at2g32720 : 124.0) member of Cytochromes b5; cytochrome B5 isoform B (CB5-B); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform D (TAIR:AT5G48810.1); Has 4197 Blast hits to 4166 proteins in 470 species: Archae - 2; Bacteria - 26; Metazoa - 1028; Fungi - 1701; Plants - 800; Viruses - 3; Other Eukaryotes - 637 (source: NCBI BLink). & (gnl|cdd|35757 : 107.0) no description available & (gnl|cdd|84581 : 96.5) no description available & (reliability: 238.0) & (original description: Putative At2g32720, Description = Cytochrome b5, PFAM = PF00173)' T '21.99' 'redox.misc' 'niben101scf03634_38724-47541' '(at5g17770 : 461.0) Encodes NADH:cytochrome (Cyt) b5 reductase that displayed strict specificity to NADH for the reduction of a recombinant Cyt b5 (AtB5-A), whereas no Cyt b5 reduction was observed when NADPH was used as the electron donor.; NADH:cytochrome B5 reductase 1 (CBR); FUNCTIONS IN: cytochrome-b5 reductase activity; INVOLVED IN: electron transport chain; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase (TAIR:AT5G20080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35754 : 318.0) no description available & (p39869|nia_lotja : 197.0) Nitrate reductase [NADH] (EC 1.7.1.1) (NR) - Lotus japonicus & (gnl|cdd|30889 : 134.0) no description available & (reliability: 922.0) & (original description: Putative CBR1, Description = NADH--cytochrome b5 reductase 1, PFAM = PF00970;PF00175)' T '21.99' 'redox.misc' 'niben101scf04639_1666450-1681406' '(at5g20080 : 446.0) FAD/NAD(P)-binding oxidoreductase; FUNCTIONS IN: cytochrome-b5 reductase activity, copper ion binding; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834); BEST Arabidopsis thaliana protein match is: NADH:cytochrome B5 reductase 1 (TAIR:AT5G17770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35754 : 281.0) no description available & (p39866|nia2_phavu : 146.0) Nitrate reductase [NADH] 2 (EC 1.7.1.1) (NR-2) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|30889 : 130.0) no description available & (reliability: 892.0) & (original description: Putative CBR2, Description = NADH-cytochrome b5 reductase-like protein, PFAM = PF00970;PF00175)' T '21.99' 'redox.misc' 'niben101scf04995_1776168-1782529' '(gnl|cdd|35757 : 107.0) no description available & (at5g48810 : 101.0) Encodes a cytochrome b5 isoform that localizes to the ER. The C-terminal portion of the protein appears to be capable of inserting into a plant microsomal membrane in vitro and the protein appears to be subject to glycosylation.; cytochrome B5 isoform D (CB5-D); FUNCTIONS IN: heme binding; INVOLVED IN: defense response to bacterium; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform B (TAIR:AT2G32720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p49098|cyb5_tobac : 96.3) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84581 : 94.5) no description available & (reliability: 200.0) & (original description: Putative difF, Description = Cytochrome b5 DIF-F, PFAM = PF00173)' T '21.99' 'redox.misc' 'niben101scf05886_264629-273599' '(at2g32720 : 144.0) member of Cytochromes b5; cytochrome B5 isoform B (CB5-B); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform D (TAIR:AT5G48810.1); Has 4197 Blast hits to 4166 proteins in 470 species: Archae - 2; Bacteria - 26; Metazoa - 1028; Fungi - 1701; Plants - 800; Viruses - 3; Other Eukaryotes - 637 (source: NCBI BLink). & (p49100|cyb5_orysa : 141.0) Cytochrome b5 - Oryza sativa (Rice) & (gnl|cdd|35757 : 137.0) no description available & (gnl|cdd|84581 : 110.0) no description available & (reliability: 276.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T '21.99' 'redox.misc' 'niben101scf07842_132349-137639' '(at5g53560 : 224.0) Encodes a cytochrome b5 isoform that can be reduced by AtCBR, a cytochrome b5 reductase.; cytochrome B5 isoform E (CB5-E); FUNCTIONS IN: heme binding; LOCATED IN: chloroplast thylakoid membrane, endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform B (TAIR:AT2G32720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p49098|cyb5_tobac : 197.0) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35757 : 139.0) no description available & (gnl|cdd|84581 : 108.0) no description available & (reliability: 448.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T '21.99' 'redox.misc' 'niben101scf09620_429389-438179' '(gnl|cdd|35757 : 133.0) no description available & (at2g32720 : 128.0) member of Cytochromes b5; cytochrome B5 isoform B (CB5-B); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform D (TAIR:AT5G48810.1); Has 4197 Blast hits to 4166 proteins in 470 species: Archae - 2; Bacteria - 26; Metazoa - 1028; Fungi - 1701; Plants - 800; Viruses - 3; Other Eukaryotes - 637 (source: NCBI BLink). & (p49100|cyb5_orysa : 125.0) Cytochrome b5 - Oryza sativa (Rice) & (gnl|cdd|84581 : 109.0) no description available & (reliability: 250.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T '21.99' 'redox.misc' 'niben101scf13141_84557-89380' '(at5g53560 : 209.0) Encodes a cytochrome b5 isoform that can be reduced by AtCBR, a cytochrome b5 reductase.; cytochrome B5 isoform E (CB5-E); FUNCTIONS IN: heme binding; LOCATED IN: chloroplast thylakoid membrane, endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform B (TAIR:AT2G32720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p49100|cyb5_orysa : 183.0) Cytochrome b5 - Oryza sativa (Rice) & (gnl|cdd|35757 : 124.0) no description available & (gnl|cdd|84581 : 96.8) no description available & (reliability: 418.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T '21.99' 'redox.misc' 'niben101scf13254_21705-28168' '(at5g17770 : 473.0) Encodes NADH:cytochrome (Cyt) b5 reductase that displayed strict specificity to NADH for the reduction of a recombinant Cyt b5 (AtB5-A), whereas no Cyt b5 reduction was observed when NADPH was used as the electron donor.; NADH:cytochrome B5 reductase 1 (CBR); FUNCTIONS IN: cytochrome-b5 reductase activity; INVOLVED IN: electron transport chain; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase (TAIR:AT5G20080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35754 : 315.0) no description available & (p16081|nia1_orysa : 199.0) Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR1) - Oryza sativa (Rice) & (gnl|cdd|30889 : 134.0) no description available & (reliability: 946.0) & (original description: Putative CBR1, Description = NADH--cytochrome b5 reductase 1, PFAM = PF00970;PF00175)' T '21.99' 'redox.misc' 'niben101scf14308_2313-5822' '(p49098|cyb5_tobac : 125.0) Cytochrome b5 - Nicotiana tabacum (Common tobacco) & (at2g32720 : 122.0) member of Cytochromes b5; cytochrome B5 isoform B (CB5-B); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform D (TAIR:AT5G48810.1); Has 4197 Blast hits to 4166 proteins in 470 species: Archae - 2; Bacteria - 26; Metazoa - 1028; Fungi - 1701; Plants - 800; Viruses - 3; Other Eukaryotes - 637 (source: NCBI BLink). & (gnl|cdd|35757 : 108.0) no description available & (gnl|cdd|84581 : 98.4) no description available & (reliability: 238.0) & (original description: Putative CYB5, Description = Cytochrome b5, PFAM = PF00173)' T '21.99' 'redox.misc' 'niben101scf34323_48315-56181' '(at5g51880 : 301.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, iron ion binding, L-ascorbic acid binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47971 : 92.8) no description available & (reliability: 602.0) & (original description: Putative BnaCnng67150D, Description = BnaCnng67150D protein, PFAM = )' T '21.1001' 'redox' 'threonate' 'redox regulation; ascorbate metabolism; precursor' M '21.1002' 'redox' 'glucarate' 'redox regulation; ascorbate metabolism; precursor' M '21.1003' 'redox' 'gulonate-gamma-lactone' 'redox regulation; ascorbate metabolism; precursor' M '21.1004' 'redox' 'glucuronate' 'redox regulation; ascorbate metabolism; precursor' M '21.1005' 'redox' 'mannose-6-p' 'redox regulation; ascorbate metabolism; precursor' M '21.1006' 'redox' 'mannose-1-p' 'redox regulation; ascorbate metabolism; precursor' M '21.1007' 'redox' 'galactonate-gamma-lactone' 'redox regulation; ascorbate metabolism; precursor' M '21.1008' 'redox' 'ascorbate' 'hormone metabolism.ethylene; stress; redox regulation' M '21.1009' 'redox' 'dehydroascorbate' 'stress; redox regulation' M '21.1010' 'redox' 'pyroglutamate' 'redox regulation, glutathion metabolism, degradation product. Also analyte' M '21.1011' 'redox' 'gulonate' '' M '22' 'polyamine metabolism' '' '' '22.1' 'polyamine metabolism.synthesis' '' '' '22.1.1' 'polyamine metabolism.synthesis.ornithine decarboxylase' '' '' '22.1.2' 'polyamine metabolism.synthesis.SAM decarboxylase' 'niben101scf00058_659467-662483' '(at5g18930 : 398.0) BUSHY AND DWARF 2 (BUD2); FUNCTIONS IN: adenosylmethionine decarboxylase activity; INVOLVED IN: spermidine biosynthetic process, spermine biosynthetic process, polyamine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine decarboxylase, core (InterPro:IPR016067), S-adenosylmethionine decarboxylase (InterPro:IPR001985), S-adenosylmethionine decarboxylase, conserved site (InterPro:IPR018166), S-adenosylmethionine decarboxylase subgroup (InterPro:IPR018167); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine decarboxylase (TAIR:AT3G02470.4); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36007 : 315.0) no description available & (gnl|cdd|85518 : 287.0) no description available & (q9axe3|dcam_dauca : 247.0) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] - Daucus carota (Carrot) & (reliability: 796.0) & (original description: Putative SAMDC4, Description = S-adenosylmethionine decarboxylase proenzyme 4, PFAM = PF01536)' T '22.1.2' 'polyamine metabolism.synthesis.SAM decarboxylase' 'niben101scf00390_81392-97957' '(q96471|dcam_iponi : 251.0) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] - Ipomoea nil (Japanese morning glory) (Pharbitis ni & (gnl|cdd|85518 : 223.0) no description available & (at3g25570 : 214.0) Adenosylmethionine decarboxylase family protein; FUNCTIONS IN: adenosylmethionine decarboxylase activity; INVOLVED IN: spermidine biosynthetic process, spermine biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine decarboxylase, core (InterPro:IPR016067), S-adenosylmethionine decarboxylase, conserved site (InterPro:IPR018166), S-adenosylmethionine decarboxylase (InterPro:IPR001985), S-adenosylmethionine decarboxylase subgroup (InterPro:IPR018167); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine decarboxylase (TAIR:AT3G02470.4). & (gnl|cdd|36007 : 198.0) no description available & (reliability: 428.0) & (original description: Putative samdc, Description = S-adenosylmethionine decarboxylase proenzyme, PFAM = PF01536)' T '22.1.2' 'polyamine metabolism.synthesis.SAM decarboxylase' 'niben101scf00390_95292-98437' '(q96471|dcam_iponi : 503.0) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] - Ipomoea nil (Japanese morning glory) (Pharbitis ni & (gnl|cdd|85518 : 439.0) no description available & (at3g02470 : 421.0) Encodes a S-adenosylmethionine decarboxylase involved in polyamine biosynthesis.; S-adenosylmethionine decarboxylase; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine decarboxylase, core (InterPro:IPR016067), S-adenosylmethionine decarboxylase (InterPro:IPR001985), S-adenosylmethionine decarboxylase, conserved site (InterPro:IPR018166), S-adenosylmethionine decarboxylase subgroup (InterPro:IPR018167); BEST Arabidopsis thaliana protein match is: Adenosylmethionine decarboxylase family protein (TAIR:AT5G15950.2); Has 1026 Blast hits to 1010 proteins in 271 species: Archae - 0; Bacteria - 57; Metazoa - 220; Fungi - 150; Plants - 531; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|36007 : 380.0) no description available & (reliability: 842.0) & (original description: Putative SAMDC, Description = S-adenosylmethionine decarboxylase proenzyme, PFAM = PF01536)' T '22.1.2' 'polyamine metabolism.synthesis.SAM decarboxylase' 'niben101scf02080_342437-345519' '(o80402|dcam_nicsy : 673.0) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|85518 : 492.0) no description available & (at3g25570 : 448.0) Adenosylmethionine decarboxylase family protein; FUNCTIONS IN: adenosylmethionine decarboxylase activity; INVOLVED IN: spermidine biosynthetic process, spermine biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine decarboxylase, core (InterPro:IPR016067), S-adenosylmethionine decarboxylase, conserved site (InterPro:IPR018166), S-adenosylmethionine decarboxylase (InterPro:IPR001985), S-adenosylmethionine decarboxylase subgroup (InterPro:IPR018167); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine decarboxylase (TAIR:AT3G02470.4). & (gnl|cdd|36007 : 410.0) no description available & (reliability: 896.0) & (original description: Putative SAMDC, Description = S-adenosylmethionine decarboxylase proenzyme, PFAM = PF01536)' T '22.1.2' 'polyamine metabolism.synthesis.SAM decarboxylase' 'niben101scf04126_515528-519077' '(o80402|dcam_nicsy : 617.0) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|85518 : 466.0) no description available & (at3g25570 : 462.0) Adenosylmethionine decarboxylase family protein; FUNCTIONS IN: adenosylmethionine decarboxylase activity; INVOLVED IN: spermidine biosynthetic process, spermine biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine decarboxylase, core (InterPro:IPR016067), S-adenosylmethionine decarboxylase, conserved site (InterPro:IPR018166), S-adenosylmethionine decarboxylase (InterPro:IPR001985), S-adenosylmethionine decarboxylase subgroup (InterPro:IPR018167); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine decarboxylase (TAIR:AT3G02470.4). & (gnl|cdd|36007 : 384.0) no description available & (reliability: 924.0) & (original description: Putative SAMDC, Description = S-adenosylmethionine decarboxylase proenzyme, PFAM = PF01536;PF08132)' T '22.1.2' 'polyamine metabolism.synthesis.SAM decarboxylase' 'niben101scf09150_372542-375549' '(at5g18930 : 400.0) BUSHY AND DWARF 2 (BUD2); FUNCTIONS IN: adenosylmethionine decarboxylase activity; INVOLVED IN: spermidine biosynthetic process, spermine biosynthetic process, polyamine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine decarboxylase, core (InterPro:IPR016067), S-adenosylmethionine decarboxylase (InterPro:IPR001985), S-adenosylmethionine decarboxylase, conserved site (InterPro:IPR018166), S-adenosylmethionine decarboxylase subgroup (InterPro:IPR018167); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine decarboxylase (TAIR:AT3G02470.4); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36007 : 324.0) no description available & (gnl|cdd|85518 : 297.0) no description available & (q04694|dcam_soltu : 256.0) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC) (SamDC) (Induced stolen tip protein TUB13) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] - Solanum tuberos & (reliability: 800.0) & (original description: Putative SAMDC4, Description = S-adenosylmethionine decarboxylase proenzyme 4, PFAM = PF01536)' T '22.1.3' 'polyamine metabolism.synthesis.arginine decarboxylase' 'nbv0.3scaffold25132_18238-22433' '(q43075|spe1_pea : 969.0) Arginine decarboxylase (EC 4.1.1.19) (ARGDC) (ADC) - Pisum sativum (Garden pea) & (at2g16500 : 942.0) encodes a arginine decarboxylase (ADC), a rate-limiting enzyme that catalyzes the first step of polyamine (PA) biosynthesis via ADC pathway in Arabidopsis thaliana. Arabidopsis genome has two ADC paralogs, ADC1 and ADC2. Double mutant analysis showed that ADC genes are essential for the production of PA, and are required for normal seed development. Promoter region of ADC1 contains 742-bp AT-rich transposable element, called AtATE, that belongs to the MITE families of repetitive elements.; arginine decarboxylase 1 (ADC1); CONTAINS InterPro DOMAIN/s: Orn/DAP/Arg decarboxylase 2, C-terminal (InterPro:IPR022643), Orn/DAP/Arg decarboxylase 2, conserved site (InterPro:IPR022657), Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site (InterPro:IPR022653), Ornithine/DAP/Arg decarboxylase (InterPro:IPR000183), Arginine decarboxylase (InterPro:IPR002985), Orn/DAP/Arg decarboxylase 2, N-terminal (InterPro:IPR022644); BEST Arabidopsis thaliana protein match is: arginine decarboxylase 2 (TAIR:AT4G34710.2); Has 7460 Blast hits to 7389 proteins in 2069 species: Archae - 108; Bacteria - 5016; Metazoa - 91; Fungi - 35; Plants - 637; Viruses - 2; Other Eukaryotes - 1571 (source: NCBI BLink). & (gnl|cdd|81543 : 675.0) no description available & (reliability: 1884.0) & (original description: Putative adc1, Description = Arginine decarboxylase, PFAM = PF02784)' T '22.1.3' 'polyamine metabolism.synthesis.arginine decarboxylase' 'niben101scf00466_323752-327914' '(q43075|spe1_pea : 971.0) Arginine decarboxylase (EC 4.1.1.19) (ARGDC) (ADC) - Pisum sativum (Garden pea) & (at4g34710 : 930.0) encodes a arginine decarboxylase (ADC), a rate-limiting enzyme that catalyzes the first step of polyamine (PA) biosynthesis via ADC pathway in Arabidopsis thaliana. Arabidopsis genome has two ADC paralogs, ADC1 and ADC2. ADC2 is stress-inducible (osmotic stress). Double mutant analysis showed that ADC genes are essential for the production of PA, and are required for normal seed development. Overexpression causes phenotypes similar to GA-deficient plants and these plants show reduced levels of GA due to lower expression levels of AtGA20ox1, AtGA3ox3 and AtGA3ox1.; arginine decarboxylase 2 (ADC2); CONTAINS InterPro DOMAIN/s: Orn/DAP/Arg decarboxylase 2, C-terminal (InterPro:IPR022643), Orn/DAP/Arg decarboxylase 2, conserved site (InterPro:IPR022657), Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site (InterPro:IPR022653), Ornithine/DAP/Arg decarboxylase (InterPro:IPR000183), Arginine decarboxylase (InterPro:IPR002985), Orn/DAP/Arg decarboxylase 2, N-terminal (InterPro:IPR022644); BEST Arabidopsis thaliana protein match is: arginine decarboxylase 1 (TAIR:AT2G16500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81543 : 677.0) no description available & (reliability: 1860.0) & (original description: Putative adc1, Description = Arginine decarboxylase, PFAM = PF02784)' T '22.1.3' 'polyamine metabolism.synthesis.arginine decarboxylase' 'niben101scf01025_204434-208629' '(q43075|spe1_pea : 942.0) Arginine decarboxylase (EC 4.1.1.19) (ARGDC) (ADC) - Pisum sativum (Garden pea) & (at4g34710 : 928.0) encodes a arginine decarboxylase (ADC), a rate-limiting enzyme that catalyzes the first step of polyamine (PA) biosynthesis via ADC pathway in Arabidopsis thaliana. Arabidopsis genome has two ADC paralogs, ADC1 and ADC2. ADC2 is stress-inducible (osmotic stress). Double mutant analysis showed that ADC genes are essential for the production of PA, and are required for normal seed development. Overexpression causes phenotypes similar to GA-deficient plants and these plants show reduced levels of GA due to lower expression levels of AtGA20ox1, AtGA3ox3 and AtGA3ox1.; arginine decarboxylase 2 (ADC2); CONTAINS InterPro DOMAIN/s: Orn/DAP/Arg decarboxylase 2, C-terminal (InterPro:IPR022643), Orn/DAP/Arg decarboxylase 2, conserved site (InterPro:IPR022657), Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site (InterPro:IPR022653), Ornithine/DAP/Arg decarboxylase (InterPro:IPR000183), Arginine decarboxylase (InterPro:IPR002985), Orn/DAP/Arg decarboxylase 2, N-terminal (InterPro:IPR022644); BEST Arabidopsis thaliana protein match is: arginine decarboxylase 1 (TAIR:AT2G16500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81543 : 677.0) no description available & (reliability: 1856.0) & (original description: Putative adc1, Description = Arginine decarboxylase, PFAM = PF02784)' T '22.1.4' 'polyamine metabolism.synthesis.agmatine deiminase' 'niben101scf02632_396852-410242' '(at5g08170 : 592.0) EMBRYO DEFECTIVE 1873 (EMB1873); CONTAINS InterPro DOMAIN/s: Agmatine deiminase (InterPro:IPR017754), Peptidyl-arginine deiminase, Porphyromonas-type (InterPro:IPR007466); Has 2547 Blast hits to 2545 proteins in 784 species: Archae - 10; Bacteria - 1723; Metazoa - 8; Fungi - 32; Plants - 53; Viruses - 9; Other Eukaryotes - 712 (source: NCBI BLink). & (gnl|cdd|86635 : 460.0) no description available & (reliability: 1184.0) & (original description: Putative aguA, Description = Putative agmatine deiminase, PFAM = PF04371)' T '22.1.4' 'polyamine metabolism.synthesis.agmatine deiminase' 'niben101scf05827_31981-40213' '(at5g08170 : 595.0) EMBRYO DEFECTIVE 1873 (EMB1873); CONTAINS InterPro DOMAIN/s: Agmatine deiminase (InterPro:IPR017754), Peptidyl-arginine deiminase, Porphyromonas-type (InterPro:IPR007466); Has 2547 Blast hits to 2545 proteins in 784 species: Archae - 10; Bacteria - 1723; Metazoa - 8; Fungi - 32; Plants - 53; Viruses - 9; Other Eukaryotes - 712 (source: NCBI BLink). & (gnl|cdd|86635 : 453.0) no description available & (reliability: 1190.0) & (original description: Putative AIH, Description = Agmatine deiminase, PFAM = PF04371)' T '22.1.5' 'polyamine metabolism.synthesis.N-carbamoylputrescine amidohydrolase' 'nbv0.5scaffold3284_62186-103321' '(q3hvn1|agub_soltu : 595.0) N-carbamoylputrescine amidase (EC 3.5.1.53) - Solanum tuberosum (Potato) & (at2g27450 : 550.0) Encodes N-carbamoylputrescine amidohydrolase that is involved in putrescine and polyamine biosynthesis.; nitrilase-like protein 1 (NLP1); CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), N-carbamoylputrescine amidase (InterPro:IPR017755); BEST Arabidopsis thaliana protein match is: beta-ureidopropionase (TAIR:AT5G64370.1); Has 11784 Blast hits to 11734 proteins in 2281 species: Archae - 221; Bacteria - 8133; Metazoa - 478; Fungi - 416; Plants - 310; Viruses - 11; Other Eukaryotes - 2215 (source: NCBI BLink). & (gnl|cdd|36024 : 212.0) no description available & (gnl|cdd|30737 : 211.0) no description available & (reliability: 1100.0) & (original description: Putative CPA, Description = N-carbamoylputrescine amidase, PFAM = PF00795)' T '22.1.5' 'polyamine metabolism.synthesis.N-carbamoylputrescine amidohydrolase' 'niben101scf00538_584594-616204' '(q3hvn1|agub_soltu : 593.0) N-carbamoylputrescine amidase (EC 3.5.1.53) - Solanum tuberosum (Potato) & (at2g27450 : 550.0) Encodes N-carbamoylputrescine amidohydrolase that is involved in putrescine and polyamine biosynthesis.; nitrilase-like protein 1 (NLP1); CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), N-carbamoylputrescine amidase (InterPro:IPR017755); BEST Arabidopsis thaliana protein match is: beta-ureidopropionase (TAIR:AT5G64370.1); Has 11784 Blast hits to 11734 proteins in 2281 species: Archae - 221; Bacteria - 8133; Metazoa - 478; Fungi - 416; Plants - 310; Viruses - 11; Other Eukaryotes - 2215 (source: NCBI BLink). & (gnl|cdd|30737 : 211.0) no description available & (gnl|cdd|36024 : 210.0) no description available & (reliability: 1100.0) & (original description: Putative CPA, Description = N-carbamoylputrescine amidase, PFAM = PF00795)' T '22.1.6' 'polyamine metabolism.synthesis.spermidine synthase' 'nbv0.5scaffold568_6416-143752' '(o48660|spde_nicsy : 518.0) Spermidine synthase (EC 2.5.1.16) (Putrescine aminopropyltransferase) (Aminopropyltransferase) - Nicotiana sylvestris (Wood tobacco) & (at1g23820 : 488.0) Spermidine synthase.; spermidine synthase 1 (SPDS1); FUNCTIONS IN: spermidine synthase activity; INVOLVED IN: spermidine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 2 (TAIR:AT1G70310.1); Has 5225 Blast hits to 5225 proteins in 1497 species: Archae - 169; Bacteria - 2879; Metazoa - 350; Fungi - 195; Plants - 413; Viruses - 0; Other Eukaryotes - 1219 (source: NCBI BLink). & (gnl|cdd|36775 : 406.0) no description available & (gnl|cdd|85532 : 317.0) no description available & (reliability: 976.0) & (original description: Putative pmt, Description = Spermidine synthase, PFAM = PF17284;PF01564)' T '22.1.6' 'polyamine metabolism.synthesis.spermidine synthase' 'niben101scf00154_122583-127961' '(o48660|spde_nicsy : 608.0) Spermidine synthase (EC 2.5.1.16) (Putrescine aminopropyltransferase) (Aminopropyltransferase) - Nicotiana sylvestris (Wood tobacco) & (at1g23820 : 519.0) Spermidine synthase.; spermidine synthase 1 (SPDS1); FUNCTIONS IN: spermidine synthase activity; INVOLVED IN: spermidine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 2 (TAIR:AT1G70310.1); Has 5225 Blast hits to 5225 proteins in 1497 species: Archae - 169; Bacteria - 2879; Metazoa - 350; Fungi - 195; Plants - 413; Viruses - 0; Other Eukaryotes - 1219 (source: NCBI BLink). & (gnl|cdd|36775 : 425.0) no description available & (gnl|cdd|85532 : 339.0) no description available & (reliability: 1038.0) & (original description: Putative SPDSYN, Description = Spermidine synthase, PFAM = PF01564;PF17284)' T '22.1.6' 'polyamine metabolism.synthesis.spermidine synthase' 'niben101scf03534_296330-302310' '(o48660|spde_nicsy : 629.0) Spermidine synthase (EC 2.5.1.16) (Putrescine aminopropyltransferase) (Aminopropyltransferase) - Nicotiana sylvestris (Wood tobacco) & (at1g70310 : 520.0) Spermidine synthase.; spermidine synthase 2 (SPDS2); FUNCTIONS IN: spermidine synthase activity; INVOLVED IN: spermidine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 1 (TAIR:AT1G23820.1); Has 5357 Blast hits to 5354 proteins in 1531 species: Archae - 177; Bacteria - 2946; Metazoa - 372; Fungi - 210; Plants - 425; Viruses - 0; Other Eukaryotes - 1227 (source: NCBI BLink). & (gnl|cdd|36775 : 430.0) no description available & (gnl|cdd|85532 : 339.0) no description available & (reliability: 1040.0) & (original description: Putative SPDSYN, Description = Spermidine synthase, PFAM = PF01564;PF17284)' T '22.1.6' 'polyamine metabolism.synthesis.spermidine synthase' 'niben101scf05697_1168587-1172003' '(at5g04610 : 251.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: catalytic activity; EXPRESSED IN: shoot apex, sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G31740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37563 : 178.0) no description available & (reliability: 502.0) & (original description: Putative At5g04610, Description = S-adenosyl-L-methionine-dependent methyltransferases superfamily protein, PFAM = )' T '22.1.6' 'polyamine metabolism.synthesis.spermidine synthase' 'niben101scf06783_1372-14527' '(q9seh4|pmt4_tobac : 700.0) Putrescine N-methyltransferase 4 (EC 2.1.1.53) (PMT 4) - Nicotiana tabacum (Common tobacco) & (at1g23820 : 401.0) Spermidine synthase.; spermidine synthase 1 (SPDS1); FUNCTIONS IN: spermidine synthase activity; INVOLVED IN: spermidine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 2 (TAIR:AT1G70310.1); Has 5225 Blast hits to 5225 proteins in 1497 species: Archae - 169; Bacteria - 2879; Metazoa - 350; Fungi - 195; Plants - 413; Viruses - 0; Other Eukaryotes - 1219 (source: NCBI BLink). & (gnl|cdd|36775 : 361.0) no description available & (gnl|cdd|85532 : 323.0) no description available & (reliability: 802.0) & (original description: Putative PMT1, Description = Putrescine N-methyltransferase 1, PFAM = PF01564;PF17284)' T '22.1.6' 'polyamine metabolism.synthesis.spermidine synthase' 'niben101scf08226_6482-15883' '(o48660|spde_nicsy : 560.0) Spermidine synthase (EC 2.5.1.16) (Putrescine aminopropyltransferase) (Aminopropyltransferase) - Nicotiana sylvestris (Wood tobacco) & (at1g23820 : 516.0) Spermidine synthase.; spermidine synthase 1 (SPDS1); FUNCTIONS IN: spermidine synthase activity; INVOLVED IN: spermidine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 2 (TAIR:AT1G70310.1); Has 5225 Blast hits to 5225 proteins in 1497 species: Archae - 169; Bacteria - 2879; Metazoa - 350; Fungi - 195; Plants - 413; Viruses - 0; Other Eukaryotes - 1219 (source: NCBI BLink). & (gnl|cdd|36775 : 425.0) no description available & (gnl|cdd|85532 : 334.0) no description available & (reliability: 1032.0) & (original description: Putative pmt, Description = Spermidine synthase, PFAM = PF17284;PF01564)' T '22.1.7' 'polyamine metabolism.synthesis.spermine synthase' 'nbv0.3scaffold41753_2974-13305' '(at5g53120 : 561.0) encodes a novel spermine synthase and is a paralog of previously characterized spermidine synthases, SPDS1 and SPDS2. SPDS3 forms heterodimers with SDPS2, which in turn forms heterodimers with SDPS1 in vivo. The gene does not complement speDelta3 deficiency of spermidine synthase in yeast but DOES complement speDelta4 deficiency.; spermidine synthase 3 (SPDS3); CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 1 (TAIR:AT1G23820.1). & (q9smb1|spd1_orysa : 422.0) Spermidine synthase 1 (EC 2.5.1.16) (Putrescine aminopropyltransferase 1) (SPDSY 1) - Oryza sativa (Rice) & (gnl|cdd|36775 : 412.0) no description available & (gnl|cdd|85532 : 307.0) no description available & (reliability: 1122.0) & (original description: Putative SPMS, Description = Spermine synthase, PFAM = PF17284;PF01564)' T '22.1.7' 'polyamine metabolism.synthesis.spermine synthase' 'niben044scf00027175ctg009_1-6560' '(at5g53120 : 532.0) encodes a novel spermine synthase and is a paralog of previously characterized spermidine synthases, SPDS1 and SPDS2. SPDS3 forms heterodimers with SDPS2, which in turn forms heterodimers with SDPS1 in vivo. The gene does not complement speDelta3 deficiency of spermidine synthase in yeast but DOES complement speDelta4 deficiency.; spermidine synthase 3 (SPDS3); CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 1 (TAIR:AT1G23820.1). & (q9smb1|spd1_orysa : 401.0) Spermidine synthase 1 (EC 2.5.1.16) (Putrescine aminopropyltransferase 1) (SPDSY 1) - Oryza sativa (Rice) & (gnl|cdd|36775 : 395.0) no description available & (gnl|cdd|85532 : 307.0) no description available & (reliability: 1064.0) & (original description: Putative SPMS, Description = Spermine synthase, PFAM = PF01564;PF17284)' T '22.1.7' 'polyamine metabolism.synthesis.spermine synthase' 'niben044scf00030855ctg004_8973-12848' '(at5g19530 : 378.0) Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function.; ACAULIS 5 (ACL5); CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 1 (TAIR:AT1G23820.1); Has 4823 Blast hits to 4823 proteins in 1442 species: Archae - 170; Bacteria - 2608; Metazoa - 258; Fungi - 194; Plants - 443; Viruses - 0; Other Eukaryotes - 1150 (source: NCBI BLink). & (gnl|cdd|80755 : 161.0) no description available & (gnl|cdd|36775 : 91.9) no description available & (q9ztr1|spd1_pea : 88.2) Spermidine synthase 1 (EC 2.5.1.16) (Putrescine aminopropyltransferase 1) (SPDSY 1) - Pisum sativum (Garden pea) & (reliability: 756.0) & (original description: Putative ac15a, Description = Thermospermine synthase, PFAM = PF01564)' T '22.1.7' 'polyamine metabolism.synthesis.spermine synthase' 'niben101scf01506_326839-331920' '(at5g19530 : 460.0) Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function.; ACAULIS 5 (ACL5); CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 1 (TAIR:AT1G23820.1); Has 4823 Blast hits to 4823 proteins in 1442 species: Archae - 170; Bacteria - 2608; Metazoa - 258; Fungi - 194; Plants - 443; Viruses - 0; Other Eukaryotes - 1150 (source: NCBI BLink). & (gnl|cdd|80755 : 254.0) no description available & (q9ztr1|spd1_pea : 137.0) Spermidine synthase 1 (EC 2.5.1.16) (Putrescine aminopropyltransferase 1) (SPDSY 1) - Pisum sativum (Garden pea) & (gnl|cdd|36775 : 131.0) no description available & (reliability: 920.0) & (original description: Putative spe4, Description = Putative spermine synthase, PFAM = PF01564;PF17284)' T '22.1.7' 'polyamine metabolism.synthesis.spermine synthase' 'niben101scf02290_176519-184758' '(at5g53120 : 558.0) encodes a novel spermine synthase and is a paralog of previously characterized spermidine synthases, SPDS1 and SPDS2. SPDS3 forms heterodimers with SDPS2, which in turn forms heterodimers with SDPS1 in vivo. The gene does not complement speDelta3 deficiency of spermidine synthase in yeast but DOES complement speDelta4 deficiency.; spermidine synthase 3 (SPDS3); CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 1 (TAIR:AT1G23820.1). & (q9smb1|spd1_orysa : 415.0) Spermidine synthase 1 (EC 2.5.1.16) (Putrescine aminopropyltransferase 1) (SPDSY 1) - Oryza sativa (Rice) & (gnl|cdd|36775 : 413.0) no description available & (gnl|cdd|85532 : 306.0) no description available & (reliability: 1116.0) & (original description: Putative SPMS, Description = Spermine synthase, PFAM = PF01564;PF17284)' T '22.1.7' 'polyamine metabolism.synthesis.spermine synthase' 'niben101scf02425_1-13504' '(at5g19530 : 406.0) Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function.; ACAULIS 5 (ACL5); CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 1 (TAIR:AT1G23820.1); Has 4823 Blast hits to 4823 proteins in 1442 species: Archae - 170; Bacteria - 2608; Metazoa - 258; Fungi - 194; Plants - 443; Viruses - 0; Other Eukaryotes - 1150 (source: NCBI BLink). & (gnl|cdd|80755 : 238.0) no description available & (q9ztr1|spd1_pea : 130.0) Spermidine synthase 1 (EC 2.5.1.16) (Putrescine aminopropyltransferase 1) (SPDSY 1) - Pisum sativum (Garden pea) & (gnl|cdd|36775 : 127.0) no description available & (reliability: 812.0) & (original description: Putative spe4, Description = Putative spermine synthase, PFAM = PF01564;PF17284)' T '22.1.7' 'polyamine metabolism.synthesis.spermine synthase' 'niben101scf11108_1539-8336' '(at5g19530 : 512.0) Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function.; ACAULIS 5 (ACL5); CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 1 (TAIR:AT1G23820.1); Has 4823 Blast hits to 4823 proteins in 1442 species: Archae - 170; Bacteria - 2608; Metazoa - 258; Fungi - 194; Plants - 443; Viruses - 0; Other Eukaryotes - 1150 (source: NCBI BLink). & (gnl|cdd|80755 : 255.0) no description available & (gnl|cdd|36775 : 145.0) no description available & (q9ztr1|spd1_pea : 138.0) Spermidine synthase 1 (EC 2.5.1.16) (Putrescine aminopropyltransferase 1) (SPDSY 1) - Pisum sativum (Garden pea) & (reliability: 1024.0) & (original description: Putative spe4, Description = Putative spermine synthase, PFAM = PF01564;PF17284)' T '22.2' 'polyamine metabolism.degradation' '' '' '22.2.1' 'polyamine metabolism.degradation.polyamin oxidase' 'nbv0.3scaffold87376_1-5692' '(at5g13700 : 368.0) Encodes a protein with polyamine oxidase activity. The mRNA of this gene is only expressed in very low amounts in the organs where it was detected (light-grown plants).; polyamine oxidase 1 (PAO1); FUNCTIONS IN: FAD binding, polyamine oxidase activity; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Flavin-containing amine oxidase (InterPro:IPR001613); BEST Arabidopsis thaliana protein match is: polyamine oxidase 4 (TAIR:AT1G65840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o64411|pao_maize : 162.0) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (gnl|cdd|35252 : 104.0) no description available & (reliability: 736.0) & (original description: Putative PAO, Description = Polyamine oxidase 1, PFAM = PF01593)' T '22.2.1' 'polyamine metabolism.degradation.polyamin oxidase' 'niben044scf00023215ctg000_164-5863' '(at5g13700 : 476.0) Encodes a protein with polyamine oxidase activity. The mRNA of this gene is only expressed in very low amounts in the organs where it was detected (light-grown plants).; polyamine oxidase 1 (PAO1); FUNCTIONS IN: FAD binding, polyamine oxidase activity; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Flavin-containing amine oxidase (InterPro:IPR001613); BEST Arabidopsis thaliana protein match is: polyamine oxidase 4 (TAIR:AT1G65840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o64411|pao_maize : 271.0) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (gnl|cdd|35252 : 204.0) no description available & (gnl|cdd|85554 : 140.0) no description available & (reliability: 952.0) & (original description: Putative pao1, Description = Polyamine oxidase, PFAM = PF01593;PF01593)' T '22.2.1' 'polyamine metabolism.degradation.polyamin oxidase' 'niben101scf01986_347755-356151' '(at5g13700 : 613.0) Encodes a protein with polyamine oxidase activity. The mRNA of this gene is only expressed in very low amounts in the organs where it was detected (light-grown plants).; polyamine oxidase 1 (PAO1); FUNCTIONS IN: FAD binding, polyamine oxidase activity; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Flavin-containing amine oxidase (InterPro:IPR001613); BEST Arabidopsis thaliana protein match is: polyamine oxidase 4 (TAIR:AT1G65840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o64411|pao_maize : 345.0) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (gnl|cdd|35252 : 237.0) no description available & (gnl|cdd|85554 : 111.0) no description available & (reliability: 1226.0) & (original description: Putative PAO1, Description = Polyamine oxidase 1, PFAM = PF01593;PF01593)' T '22.1001' 'polyamine metabolism' 'gaba' 'amino acid degradation.glutamate; polyamine metabolism' M '22.1002' 'polyamine metabolism' 'agmatine' 'polyamine metabolism' M '22.1003' 'polyamine metabolism' 'putrescine' 'amino acid degradation.arginine; polyamine metabolism' M '22.1004' 'polyamine metabolism' 'spermidine' 'polyamine metabolism' M '22.1005' 'polyamine metabolism' 'spermine' 'polyamine metabolism' M '23' 'nucleotide metabolism' 'nbv0.3scaffold31139_1-5207' '(at4g16566 : 150.0) Encodes a protein that has an unexpected bifunctional capability in vitro. The purified enzyme has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) and ADP-sulfurylase activity (E.C. 2.7.7.5). The latter is activated at low pH. The enzyme can exert it phosphorylase activity on a range of related substrates in vitro, but it acts best with APS (adenosine 5'-phsophosulfate). This protein appears to function as a homodimer.; histidine triad nucleotide-binding 4 (HINT4); FUNCTIONS IN: adenylylsulfatase activity, sulfate adenylyltransferase (ADP) activity, nucleotide binding; INVOLVED IN: sulfur metabolic process, purine ribonucleotide metabolic process, nucleotide metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histidine triad-like motif (InterPro:IPR011146), Histidine triad (HIT) protein (InterPro:IPR001310), Histidine triad motif (InterPro:IPR011151); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29591 : 110.0) no description available & (reliability: 300.0) & (original description: Putative BnaC01g19770D, Description = BnaC01g19770D protein, PFAM = PF11969)' T '23' 'nucleotide metabolism' 'niben101scf01051_430415-435506' '(at4g16566 : 199.0) Encodes a protein that has an unexpected bifunctional capability in vitro. The purified enzyme has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) and ADP-sulfurylase activity (E.C. 2.7.7.5). The latter is activated at low pH. The enzyme can exert it phosphorylase activity on a range of related substrates in vitro, but it acts best with APS (adenosine 5'-phsophosulfate). This protein appears to function as a homodimer.; histidine triad nucleotide-binding 4 (HINT4); FUNCTIONS IN: adenylylsulfatase activity, sulfate adenylyltransferase (ADP) activity, nucleotide binding; INVOLVED IN: sulfur metabolic process, purine ribonucleotide metabolic process, nucleotide metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histidine triad-like motif (InterPro:IPR011146), Histidine triad (HIT) protein (InterPro:IPR001310), Histidine triad motif (InterPro:IPR011151); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29591 : 110.0) no description available & (gnl|cdd|39560 : 85.5) no description available & (reliability: 398.0) & (original description: Putative HINT4, Description = Bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4, PFAM = PF11969)' T '23' 'nucleotide metabolism' 'niben101scf03374_31719-37256' '(at4g16566 : 188.0) Encodes a protein that has an unexpected bifunctional capability in vitro. The purified enzyme has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) and ADP-sulfurylase activity (E.C. 2.7.7.5). The latter is activated at low pH. The enzyme can exert it phosphorylase activity on a range of related substrates in vitro, but it acts best with APS (adenosine 5'-phsophosulfate). This protein appears to function as a homodimer.; histidine triad nucleotide-binding 4 (HINT4); FUNCTIONS IN: adenylylsulfatase activity, sulfate adenylyltransferase (ADP) activity, nucleotide binding; INVOLVED IN: sulfur metabolic process, purine ribonucleotide metabolic process, nucleotide metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histidine triad-like motif (InterPro:IPR011146), Histidine triad (HIT) protein (InterPro:IPR001310), Histidine triad motif (InterPro:IPR011151); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29591 : 108.0) no description available & (gnl|cdd|39560 : 82.8) no description available & (reliability: 376.0) & (original description: Putative HINT4, Description = Bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4, PFAM = PF11969)' T '23.1' 'nucleotide metabolism.synthesis' '' '' '23.1.1' 'nucleotide metabolism.synthesis.pyrimidine' '' '' '23.1.1.1' 'nucleotide metabolism.synthesis.pyrimidine.carbamoyl phosphate synthetase' 'nbv0.5scaffold2706_6132-12906' '(at1g29900 : 1935.0) carbamoyl phosphate synthetase large chain (CARB) mRNA,; carbamoyl phosphate synthetase B (CARB); FUNCTIONS IN: catalytic activity, ATP binding; INVOLVED IN: cellular response to phosphate starvation, arginine biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), MGS-like (InterPro:IPR011607), PreATP-grasp-like fold (InterPro:IPR016185), Carbamoyl phosphate synthetase, large subunit, oligomerisation (InterPro:IPR005480), Carbamoyl phosphate synthase, large subunit, glutamine-dependent (InterPro:IPR006275), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Carbamoyl phosphate synthase, large subunit (InterPro:IPR005483), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 2 (TAIR:AT1G36180.1); Has 49576 Blast hits to 29968 proteins in 5011 species: Archae - 665; Bacteria - 22536; Metazoa - 6475; Fungi - 1021; Plants - 476; Viruses - 0; Other Eukaryotes - 18403 (source: NCBI BLink). & (gnl|cdd|81506 : 1769.0) no description available & (gnl|cdd|35591 : 902.0) no description available & (reliability: 3870.0) & (original description: Putative carB, Description = Carbamoyl-phosphate synthase (glutamine-hydrolyzing), PFAM = PF02142;PF02786;PF02786;PF02787)' T '23.1.1.1' 'nucleotide metabolism.synthesis.pyrimidine.carbamoyl phosphate synthetase' 'niben101scf00482_999400-1002825' '(gnl|cdd|81506 : 723.0) no description available & (at1g29900 : 660.0) carbamoyl phosphate synthetase large chain (CARB) mRNA,; carbamoyl phosphate synthetase B (CARB); FUNCTIONS IN: catalytic activity, ATP binding; INVOLVED IN: cellular response to phosphate starvation, arginine biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), MGS-like (InterPro:IPR011607), PreATP-grasp-like fold (InterPro:IPR016185), Carbamoyl phosphate synthetase, large subunit, oligomerisation (InterPro:IPR005480), Carbamoyl phosphate synthase, large subunit, glutamine-dependent (InterPro:IPR006275), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Carbamoyl phosphate synthase, large subunit (InterPro:IPR005483), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 2 (TAIR:AT1G36180.1); Has 49576 Blast hits to 29968 proteins in 5011 species: Archae - 665; Bacteria - 22536; Metazoa - 6475; Fungi - 1021; Plants - 476; Viruses - 0; Other Eukaryotes - 18403 (source: NCBI BLink). & (gnl|cdd|35591 : 365.0) no description available & (reliability: 1320.0) & (original description: Putative carB, Description = Carbamoyl-phosphate synthase (glutamine-hydrolyzing), PFAM = PF02786)' T '23.1.1.1' 'nucleotide metabolism.synthesis.pyrimidine.carbamoyl phosphate synthetase' 'niben101scf05372_608167-615104' '(at1g29900 : 1935.0) carbamoyl phosphate synthetase large chain (CARB) mRNA,; carbamoyl phosphate synthetase B (CARB); FUNCTIONS IN: catalytic activity, ATP binding; INVOLVED IN: cellular response to phosphate starvation, arginine biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), MGS-like (InterPro:IPR011607), PreATP-grasp-like fold (InterPro:IPR016185), Carbamoyl phosphate synthetase, large subunit, oligomerisation (InterPro:IPR005480), Carbamoyl phosphate synthase, large subunit, glutamine-dependent (InterPro:IPR006275), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Carbamoyl phosphate synthase, large subunit (InterPro:IPR005483), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 2 (TAIR:AT1G36180.1); Has 49576 Blast hits to 29968 proteins in 5011 species: Archae - 665; Bacteria - 22536; Metazoa - 6475; Fungi - 1021; Plants - 476; Viruses - 0; Other Eukaryotes - 18403 (source: NCBI BLink). & (gnl|cdd|81506 : 1770.0) no description available & (gnl|cdd|35591 : 905.0) no description available & (reliability: 3870.0) & (original description: Putative CARB, Description = Carbamoyl-phosphate synthase large chain, chloroplastic, PFAM = PF02786;PF02786;PF02787;PF02142)' T '23.1.1.1' 'nucleotide metabolism.synthesis.pyrimidine.carbamoyl phosphate synthetase' 'niben101scf05449_10594-16275' '(at3g27740 : 668.0) carbamoyl phosphate synthetase small subunit mRNA (carA),; carbamoyl phosphate synthetase A (CARA); FUNCTIONS IN: carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity, catalytic activity; INVOLVED IN: cellular response to phosphate starvation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), Carbamoyl phosphate synthase, GATase domain (InterPro:IPR001317), Carbamoyl phosphate synthase, small subunit, N-terminal (InterPro:IPR002474), Glutamine amidotransferase type 1 (InterPro:IPR017926), Carbamoyl phosphate synthase, small subunit (InterPro:IPR006274), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); BEST Arabidopsis thaliana protein match is: anthranilate synthase beta subunit 1 (TAIR:AT1G25220.1); Has 28262 Blast hits to 23423 proteins in 4115 species: Archae - 591; Bacteria - 17320; Metazoa - 1741; Fungi - 716; Plants - 245; Viruses - 0; Other Eukaryotes - 7649 (source: NCBI BLink). & (gnl|cdd|84188 : 545.0) no description available & (gnl|cdd|35591 : 432.0) no description available & (reliability: 1336.0) & (original description: Putative CARA, Description = Carbamoyl-phosphate synthase small chain, chloroplastic, PFAM = PF00117;PF00988)' T '23.1.1.2' 'nucleotide metabolism.synthesis.pyrimidine.aspartate transcarbamoylase' 'niben101scf00800_93818-98272' '(q43087|pyrb2_pea : 546.0) Aspartate carbamoyltransferase 2, chloroplast precursor (EC 2.1.3.2) (Aspartate transcarbamylase 2) (ATCase 2) - Pisum sativum (Garden pea) & (at3g20330 : 535.0) encodes aspartate carbamoyltransferase catalyzing the second step in the de novo pyrimidine ribonucleotide biosynthesis; PYRIMIDINE B (PYRB); FUNCTIONS IN: amino acid binding, protein binding, aspartate carbamoyltransferase activity, carboxyl- or carbamoyltransferase activity; INVOLVED IN: cellular response to phosphate starvation, pyrimidine ribonucleotide biosynthetic process, cellular amino acid metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (InterPro:IPR006132), Aspartate/ornithine carbamoyltransferase (InterPro:IPR006130), Aspartate carbamoyltransferase, eukaryotic (InterPro:IPR002082), Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (InterPro:IPR006131); BEST Arabidopsis thaliana protein match is: ornithine carbamoyltransferase (TAIR:AT1G75330.1); Has 16843 Blast hits to 16841 proteins in 2894 species: Archae - 534; Bacteria - 10902; Metazoa - 218; Fungi - 284; Plants - 116; Viruses - 6; Other Eukaryotes - 4783 (source: NCBI BLink). & (gnl|cdd|30886 : 342.0) no description available & (gnl|cdd|35591 : 320.0) no description available & (reliability: 1070.0) & (original description: Putative PYRB1, Description = Aspartate carbamoyltransferase 1, chloroplastic, PFAM = PF00185;PF02729)' T '23.1.1.2' 'nucleotide metabolism.synthesis.pyrimidine.aspartate transcarbamoylase' 'niben101scf15752_120987-125409' '(q43087|pyrb2_pea : 544.0) Aspartate carbamoyltransferase 2, chloroplast precursor (EC 2.1.3.2) (Aspartate transcarbamylase 2) (ATCase 2) - Pisum sativum (Garden pea) & (at3g20330 : 538.0) encodes aspartate carbamoyltransferase catalyzing the second step in the de novo pyrimidine ribonucleotide biosynthesis; PYRIMIDINE B (PYRB); FUNCTIONS IN: amino acid binding, protein binding, aspartate carbamoyltransferase activity, carboxyl- or carbamoyltransferase activity; INVOLVED IN: cellular response to phosphate starvation, pyrimidine ribonucleotide biosynthetic process, cellular amino acid metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (InterPro:IPR006132), Aspartate/ornithine carbamoyltransferase (InterPro:IPR006130), Aspartate carbamoyltransferase, eukaryotic (InterPro:IPR002082), Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (InterPro:IPR006131); BEST Arabidopsis thaliana protein match is: ornithine carbamoyltransferase (TAIR:AT1G75330.1); Has 16843 Blast hits to 16841 proteins in 2894 species: Archae - 534; Bacteria - 10902; Metazoa - 218; Fungi - 284; Plants - 116; Viruses - 6; Other Eukaryotes - 4783 (source: NCBI BLink). & (gnl|cdd|30886 : 344.0) no description available & (gnl|cdd|35591 : 322.0) no description available & (reliability: 1076.0) & (original description: Putative PYRB, Description = Aspartate carbamoyltransferase, chloroplastic, PFAM = PF00185;PF02729)' T '23.1.1.3' 'nucleotide metabolism.synthesis.pyrimidine.dihydroorotase' 'niben044scf00029884ctg000_1-4919' '(gnl|cdd|81600 : 373.0) no description available & (at4g22930 : 362.0) Encodes dihydroorotase (PYR4).; pyrimidin 4 (PYR4); FUNCTIONS IN: dihydroorotase activity; INVOLVED IN: 'de novo' pyrimidine base biosynthetic process, pyrimidine base biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dihydroorotase, conserved site (InterPro:IPR002195), Dihydroorotase homodimeric type (InterPro:IPR004721), Amidohydrolase 1 (InterPro:IPR006680); Has 3373 Blast hits to 3371 proteins in 1108 species: Archae - 32; Bacteria - 2225; Metazoa - 2; Fungi - 146; Plants - 54; Viruses - 0; Other Eukaryotes - 914 (source: NCBI BLink). & (gnl|cdd|38113 : 273.0) no description available & (reliability: 724.0) & (original description: Putative pyrC, Description = DHOase, PFAM = PF01979)' T '23.1.1.3' 'nucleotide metabolism.synthesis.pyrimidine.dihydroorotase' 'niben101scf05948_663504-683689' '(gnl|cdd|81600 : 582.0) no description available & (at4g22930 : 577.0) Encodes dihydroorotase (PYR4).; pyrimidin 4 (PYR4); FUNCTIONS IN: dihydroorotase activity; INVOLVED IN: 'de novo' pyrimidine base biosynthetic process, pyrimidine base biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dihydroorotase, conserved site (InterPro:IPR002195), Dihydroorotase homodimeric type (InterPro:IPR004721), Amidohydrolase 1 (InterPro:IPR006680); Has 3373 Blast hits to 3371 proteins in 1108 species: Archae - 32; Bacteria - 2225; Metazoa - 2; Fungi - 146; Plants - 54; Viruses - 0; Other Eukaryotes - 914 (source: NCBI BLink). & (gnl|cdd|38113 : 438.0) no description available & (reliability: 1154.0) & (original description: Putative PYR4, Description = Dihydroorotase, mitochondrial, PFAM = PF01979)' T '23.1.1.4' 'nucleotide metabolism.synthesis.pyrimidine.dihydroorotate dehydrogenase' 'nbv0.5scaffold1593_89251-110856' '(at5g23300 : 617.0) dihydroorotate dehydrogenase, catalyses fourth step of pyrimidine biosynthesis; pyrimidine d (PYRD); FUNCTIONS IN: dihydroorotate dehydrogenase activity; INVOLVED IN: 'de novo' pyrimidine base biosynthetic process, pyrimidine ribonucleotide biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Dihydroorotate dehydrogenase, conserved site (InterPro:IPR001295), Aldolase-type TIM barrel (InterPro:IPR013785), Dihydroorotate dehydrogenase, class 2 (InterPro:IPR005719), Dihydroorotate dehydrogenase, class 1/ 2 (InterPro:IPR012135); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36649 : 516.0) no description available & (gnl|cdd|73400 : 446.0) no description available & (reliability: 1234.0) & (original description: Putative PYRD, Description = Dihydroorotate dehydrogenase (quinone), mitochondrial, PFAM = PF01180)' T '23.1.1.4' 'nucleotide metabolism.synthesis.pyrimidine.dihydroorotate dehydrogenase' 'niben101scf04077_573004-591709' '(at5g23300 : 620.0) dihydroorotate dehydrogenase, catalyses fourth step of pyrimidine biosynthesis; pyrimidine d (PYRD); FUNCTIONS IN: dihydroorotate dehydrogenase activity; INVOLVED IN: 'de novo' pyrimidine base biosynthetic process, pyrimidine ribonucleotide biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Dihydroorotate dehydrogenase, conserved site (InterPro:IPR001295), Aldolase-type TIM barrel (InterPro:IPR013785), Dihydroorotate dehydrogenase, class 2 (InterPro:IPR005719), Dihydroorotate dehydrogenase, class 1/ 2 (InterPro:IPR012135); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36649 : 517.0) no description available & (gnl|cdd|73400 : 450.0) no description available & (reliability: 1240.0) & (original description: Putative PYRD, Description = Dihydroorotate dehydrogenase (quinone), mitochondrial, PFAM = PF01180)' T '23.1.1.4' 'nucleotide metabolism.synthesis.pyrimidine.dihydroorotate dehydrogenase' 'niben101scf06829_358139-362159' '(at5g23300 : 189.0) dihydroorotate dehydrogenase, catalyses fourth step of pyrimidine biosynthesis; pyrimidine d (PYRD); FUNCTIONS IN: dihydroorotate dehydrogenase activity; INVOLVED IN: 'de novo' pyrimidine base biosynthetic process, pyrimidine ribonucleotide biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Dihydroorotate dehydrogenase, conserved site (InterPro:IPR001295), Aldolase-type TIM barrel (InterPro:IPR013785), Dihydroorotate dehydrogenase, class 2 (InterPro:IPR005719), Dihydroorotate dehydrogenase, class 1/ 2 (InterPro:IPR012135); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36649 : 159.0) no description available & (gnl|cdd|73400 : 144.0) no description available & (reliability: 378.0) & (original description: Putative pyrD, Description = DHOdehase, PFAM = PF01180)' T '23.1.1.5' 'nucleotide metabolism.synthesis.pyrimidine.orotate phosphoribosyltransferase' 'niben101scf05747_112434-125464' '(q42942|pyr5_tobac : 860.0) Uridine 5'-monophosphate synthase (UMP synthase) [Includes: Orotate phosphoribosyltransferase (EC 2.4.2.10) (OPRTase); Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMPdecase)] (Fragment) - Nicotiana tabacum (Common tobacco) & (at3g54470 : 711.0) encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis; uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS); FUNCTIONS IN: orotate phosphoribosyltransferase activity, orotidine-5'-phosphate decarboxylase activity; INVOLVED IN: response to cadmium ion, cellular response to phosphate starvation, pyrimidine ribonucleotide biosynthetic process, nucleoside metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Orotidine 5'-phosphate decarboxylase, subfamily 1, core (InterPro:IPR014732), Orotidine 5'-phosphate decarboxylase, active site (InterPro:IPR018089), Ribulose-phosphate binding barrel (InterPro:IPR011060), Phosphoribosyltransferase (InterPro:IPR000836), Orotate phosphoribosyl transferase (InterPro:IPR004467), Orotidine 5'-phosphate decarboxylase, core (InterPro:IPR001754); Has 9174 Blast hits to 9124 proteins in 2964 species: Archae - 386; Bacteria - 5538; Metazoa - 208; Fungi - 955; Plants - 89; Viruses - 3; Other Eukaryotes - 1995 (source: NCBI BLink). & (gnl|cdd|36591 : 262.0) no description available & (gnl|cdd|84617 : 188.0) no description available & (reliability: 1422.0) & (original description: Putative pyr, Description = Uridine 5'-monophosphate synthase, PFAM = PF00156;PF00215)' T '23.1.1.6' 'nucleotide metabolism.synthesis.pyrimidine.orotidine-5'-phosphate decarboxylase' '' '' '23.1.1.10' 'nucleotide metabolism.synthesis.pyrimidine.CTP synthetase' 'nbv0.3scaffold34693_7336-15856' '(gnl|cdd|37598 : 1000.0) no description available & (at1g30820 : 929.0) CTP synthase family protein; FUNCTIONS IN: CTP synthase activity, catalytic activity; INVOLVED IN: pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), CTP synthase (InterPro:IPR004468), CTP synthase, N-terminal (InterPro:IPR017456), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: CTP synthase family protein (TAIR:AT2G34890.1); Has 10946 Blast hits to 10907 proteins in 2949 species: Archae - 238; Bacteria - 5576; Metazoa - 256; Fungi - 232; Plants - 177; Viruses - 0; Other Eukaryotes - 4467 (source: NCBI BLink). & (gnl|cdd|81555 : 791.0) no description available & (reliability: 1858.0) & (original description: Putative URA7, Description = CTP synthase 1, PFAM = PF00117;PF06418)' T '23.1.1.10' 'nucleotide metabolism.synthesis.pyrimidine.CTP synthetase' 'nbv0.3scaffold35601_1-7665' '(gnl|cdd|37598 : 950.0) no description available & (at1g30820 : 857.0) CTP synthase family protein; FUNCTIONS IN: CTP synthase activity, catalytic activity; INVOLVED IN: pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), CTP synthase (InterPro:IPR004468), CTP synthase, N-terminal (InterPro:IPR017456), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: CTP synthase family protein (TAIR:AT2G34890.1); Has 10946 Blast hits to 10907 proteins in 2949 species: Archae - 238; Bacteria - 5576; Metazoa - 256; Fungi - 232; Plants - 177; Viruses - 0; Other Eukaryotes - 4467 (source: NCBI BLink). & (gnl|cdd|81555 : 763.0) no description available & (reliability: 1714.0) & (original description: Putative pyrG, Description = CTP synthase, PFAM = PF06418;PF00117)' T '23.1.1.10' 'nucleotide metabolism.synthesis.pyrimidine.CTP synthetase' 'nbv0.5scaffold621_555289-564676' '(gnl|cdd|37598 : 817.0) no description available & (at4g02120 : 752.0) CTP synthase family protein; FUNCTIONS IN: CTP synthase activity, catalytic activity; INVOLVED IN: pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), CTP synthase (InterPro:IPR004468), CTP synthase, N-terminal (InterPro:IPR017456), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: CTP synthase family protein (TAIR:AT3G12670.1); Has 10891 Blast hits to 10859 proteins in 2938 species: Archae - 237; Bacteria - 5545; Metazoa - 255; Fungi - 228; Plants - 170; Viruses - 0; Other Eukaryotes - 4456 (source: NCBI BLink). & (gnl|cdd|81555 : 680.0) no description available & (reliability: 1504.0) & (original description: Putative ctps, Description = CTP synthase, PFAM = PF00117;PF06418;PF06418)' T '23.1.1.10' 'nucleotide metabolism.synthesis.pyrimidine.CTP synthetase' 'niben101scf01623_1111803-1126370' '(gnl|cdd|37598 : 935.0) no description available & (at4g02120 : 870.0) CTP synthase family protein; FUNCTIONS IN: CTP synthase activity, catalytic activity; INVOLVED IN: pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), CTP synthase (InterPro:IPR004468), CTP synthase, N-terminal (InterPro:IPR017456), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: CTP synthase family protein (TAIR:AT3G12670.1); Has 10891 Blast hits to 10859 proteins in 2938 species: Archae - 237; Bacteria - 5545; Metazoa - 255; Fungi - 228; Plants - 170; Viruses - 0; Other Eukaryotes - 4456 (source: NCBI BLink). & (gnl|cdd|81555 : 771.0) no description available & (reliability: 1740.0) & (original description: Putative pyrG, Description = CTP synthase, PFAM = PF00117;PF06418)' T '23.1.1.10' 'nucleotide metabolism.synthesis.pyrimidine.CTP synthetase' 'niben101scf09444_107065-118708' '(at4g02120 : 439.0) CTP synthase family protein; FUNCTIONS IN: CTP synthase activity, catalytic activity; INVOLVED IN: pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), CTP synthase (InterPro:IPR004468), CTP synthase, N-terminal (InterPro:IPR017456), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: CTP synthase family protein (TAIR:AT3G12670.1); Has 10891 Blast hits to 10859 proteins in 2938 species: Archae - 237; Bacteria - 5545; Metazoa - 255; Fungi - 228; Plants - 170; Viruses - 0; Other Eukaryotes - 4456 (source: NCBI BLink). & (gnl|cdd|37598 : 435.0) no description available & (gnl|cdd|28858 : 348.0) no description available & (reliability: 878.0) & (original description: Putative ctps, Description = CTP synthase, PFAM = PF06418;PF00117)' T '23.1.1.10' 'nucleotide metabolism.synthesis.pyrimidine.CTP synthetase' 'niben101scf09708_593954-602463' '(gnl|cdd|37598 : 995.0) no description available & (at1g30820 : 902.0) CTP synthase family protein; FUNCTIONS IN: CTP synthase activity, catalytic activity; INVOLVED IN: pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), CTP synthase (InterPro:IPR004468), CTP synthase, N-terminal (InterPro:IPR017456), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: CTP synthase family protein (TAIR:AT2G34890.1); Has 10946 Blast hits to 10907 proteins in 2949 species: Archae - 238; Bacteria - 5576; Metazoa - 256; Fungi - 232; Plants - 177; Viruses - 0; Other Eukaryotes - 4467 (source: NCBI BLink). & (gnl|cdd|81555 : 800.0) no description available & (reliability: 1804.0) & (original description: Putative pyrG, Description = CTP synthase, PFAM = PF00117;PF06418)' T '23.1.1.10' 'nucleotide metabolism.synthesis.pyrimidine.CTP synthetase' 'niben101scf10122_184664-193304' '(gnl|cdd|37598 : 1006.0) no description available & (at1g30820 : 935.0) CTP synthase family protein; FUNCTIONS IN: CTP synthase activity, catalytic activity; INVOLVED IN: pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), CTP synthase (InterPro:IPR004468), CTP synthase, N-terminal (InterPro:IPR017456), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: CTP synthase family protein (TAIR:AT2G34890.1); Has 10946 Blast hits to 10907 proteins in 2949 species: Archae - 238; Bacteria - 5576; Metazoa - 256; Fungi - 232; Plants - 177; Viruses - 0; Other Eukaryotes - 4467 (source: NCBI BLink). & (gnl|cdd|81555 : 790.0) no description available & (reliability: 1870.0) & (original description: Putative pyrG, Description = CTP synthase, PFAM = PF00117;PF06418)' T '23.1.1.1001' 'nucleotide metabolism.synthesis.pyrimidines' 'adenine' '' M '23.1.1.1002' 'nucleotide metabolism.synthesis.pyrimidines' 'adenosine' '' M '23.1.1.1003' 'nucleotide metabolism.synthesis.pyrimidines' 'amp' '' M '23.1.1.1004' 'nucleotide metabolism.synthesis.pyrimidines' 'adp' '' M '23.1.1.1005' 'nucleotide metabolism.synthesis.pyrimidines' 'atp' '' M '23.1.1.1006' 'nucleotide metabolism.synthesis.pyrimidines' 'cytidine' '' M '23.1.1.1007' 'nucleotide metabolism.synthesis.pyrimidines' 'cmp' '' M '23.1.1.1008' 'nucleotide metabolism.synthesis.pyrimidines' 'cdp' '' M '23.1.1.1009' 'nucleotide metabolism.synthesis.pyrimidines' 'ctp' '' M '23.1.1.1010' 'nucleotide metabolism.synthesis.pyrimidines' 'dctp' '' M '23.1.1.1011' 'nucleotide metabolism.synthesis.pyrimidines' 'thymidine' '' M '23.1.2' 'nucleotide metabolism.synthesis.purine' '' '' '23.1.2.1' 'nucleotide metabolism.synthesis.purine.amidophosphoribosyltransferase' 'niben044scf00059617ctg000_13440-17060' '(p52418|pur1_soybn : 759.0) Amidophosphoribosyltransferase, chloroplast precursor (EC 2.4.2.14) (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPAT) - Glycine max (Soybean) & (at2g16570 : 751.0) Amidophosphoribosyltransferase (ATase: EC 2.4.2.14) is a key enzyme in the pathway of purine nucleotide biosynthesis; GLN phosphoribosyl pyrophosphate amidotransferase 1 (ASE1); FUNCTIONS IN: amidophosphoribosyltransferase activity; INVOLVED IN: purine base biosynthetic process, metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Phosphoribosyltransferase (InterPro:IPR000836), Amidophosphoribosyl transferase (InterPro:IPR005854), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: GLN phosphoribosyl pyrophosphate amidotransferase 2 (TAIR:AT4G34740.1); Has 21477 Blast hits to 21465 proteins in 2911 species: Archae - 627; Bacteria - 12302; Metazoa - 410; Fungi - 379; Plants - 300; Viruses - 17; Other Eukaryotes - 7442 (source: NCBI BLink). & (gnl|cdd|35792 : 647.0) no description available & (gnl|cdd|30383 : 604.0) no description available & (reliability: 1502.0) & (original description: Putative purF, Description = 5-phosphoribosyl-1-pyrophosphate amidotransferase, PFAM = PF00156;PF13537)' T '23.1.2.1' 'nucleotide metabolism.synthesis.purine.amidophosphoribosyltransferase' 'niben101scf01852_443578-448560' '(p52418|pur1_soybn : 773.0) Amidophosphoribosyltransferase, chloroplast precursor (EC 2.4.2.14) (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPAT) - Glycine max (Soybean) & (at2g16570 : 763.0) Amidophosphoribosyltransferase (ATase: EC 2.4.2.14) is a key enzyme in the pathway of purine nucleotide biosynthesis; GLN phosphoribosyl pyrophosphate amidotransferase 1 (ASE1); FUNCTIONS IN: amidophosphoribosyltransferase activity; INVOLVED IN: purine base biosynthetic process, metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Phosphoribosyltransferase (InterPro:IPR000836), Amidophosphoribosyl transferase (InterPro:IPR005854), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: GLN phosphoribosyl pyrophosphate amidotransferase 2 (TAIR:AT4G34740.1); Has 21477 Blast hits to 21465 proteins in 2911 species: Archae - 627; Bacteria - 12302; Metazoa - 410; Fungi - 379; Plants - 300; Viruses - 17; Other Eukaryotes - 7442 (source: NCBI BLink). & (gnl|cdd|35792 : 659.0) no description available & (gnl|cdd|30383 : 615.0) no description available & (reliability: 1526.0) & (original description: Putative purF, Description = 5-phosphoribosyl-1-pyrophosphate amidotransferase, PFAM = PF00156;PF13537)' T '23.1.2.1' 'nucleotide metabolism.synthesis.purine.amidophosphoribosyltransferase' 'niben101scf10919_206653-210294' '(at4g34740 : 850.0) Encodes glutamine 5-phosphoribosylpyrophosphate amidotransferase. Mutants are deficient in leaf, but not cotyledon, plastid and palisade cell development. Mutants exhibit defective chloroplast development under non-low light, suggesting that the defect in chloroplast development is caused by photo-oxidative damage.; GLN phosphoribosyl pyrophosphate amidotransferase 2 (ASE2); FUNCTIONS IN: amidophosphoribosyltransferase activity; INVOLVED IN: purine base biosynthetic process, purine nucleotide biosynthetic process, leaf morphogenesis; LOCATED IN: plastid stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Phosphoribosyltransferase (InterPro:IPR000836), Amidophosphoribosyl transferase (InterPro:IPR005854), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: GLN phosphoribosyl pyrophosphate amidotransferase 1 (TAIR:AT2G16570.1); Has 21535 Blast hits to 21523 proteins in 2920 species: Archae - 630; Bacteria - 12403; Metazoa - 419; Fungi - 318; Plants - 251; Viruses - 17; Other Eukaryotes - 7497 (source: NCBI BLink). & (p52418|pur1_soybn : 807.0) Amidophosphoribosyltransferase, chloroplast precursor (EC 2.4.2.14) (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPAT) - Glycine max (Soybean) & (gnl|cdd|35792 : 683.0) no description available & (gnl|cdd|30383 : 626.0) no description available & (reliability: 1700.0) & (original description: Putative purF, Description = 5-phosphoribosyl-1-pyrophosphate amidotransferase, PFAM = PF00156;PF13537)' T '23.1.2.1' 'nucleotide metabolism.synthesis.purine.amidophosphoribosyltransferase' 'niben101scf39208_23014-26851' '(at4g34740 : 852.0) Encodes glutamine 5-phosphoribosylpyrophosphate amidotransferase. Mutants are deficient in leaf, but not cotyledon, plastid and palisade cell development. Mutants exhibit defective chloroplast development under non-low light, suggesting that the defect in chloroplast development is caused by photo-oxidative damage.; GLN phosphoribosyl pyrophosphate amidotransferase 2 (ASE2); FUNCTIONS IN: amidophosphoribosyltransferase activity; INVOLVED IN: purine base biosynthetic process, purine nucleotide biosynthetic process, leaf morphogenesis; LOCATED IN: plastid stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Phosphoribosyltransferase (InterPro:IPR000836), Amidophosphoribosyl transferase (InterPro:IPR005854), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: GLN phosphoribosyl pyrophosphate amidotransferase 1 (TAIR:AT2G16570.1); Has 21535 Blast hits to 21523 proteins in 2920 species: Archae - 630; Bacteria - 12403; Metazoa - 419; Fungi - 318; Plants - 251; Viruses - 17; Other Eukaryotes - 7497 (source: NCBI BLink). & (p52418|pur1_soybn : 809.0) Amidophosphoribosyltransferase, chloroplast precursor (EC 2.4.2.14) (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPAT) - Glycine max (Soybean) & (gnl|cdd|35792 : 685.0) no description available & (gnl|cdd|30383 : 624.0) no description available & (reliability: 1704.0) & (original description: Putative purF, Description = 5-phosphoribosyl-1-pyrophosphate amidotransferase, PFAM = PF00156;PF13537)' T '23.1.2.2' 'nucleotide metabolism.synthesis.purine.GAR Synthetase' 'niben101scf04787_53244-59328' '(at1g09830 : 724.0) glycinamide ribonucleotide synthetase (GAR synthetase) that catalyzes the conversion of phosphoribosyl amine to phosphoribosyl glycineamide; Glycinamide ribonucleotide (GAR) synthetase; FUNCTIONS IN: phosphoribosylamine-glycine ligase activity; INVOLVED IN: purine base biosynthetic process, purine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide synthetase, conserved site (InterPro:IPR020559), Phosphoribosylglycinamide synthetase, C-domain (InterPro:IPR020560), Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain (InterPro:IPR020561), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), PreATP-grasp-like fold (InterPro:IPR016185), Phosphoribosylglycinamide synthetase, N-domain (InterPro:IPR020562), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054), Phosphoribosylglycinamide synthetase (InterPro:IPR000115); Has 12648 Blast hits to 12644 proteins in 2666 species: Archae - 340; Bacteria - 7373; Metazoa - 216; Fungi - 226; Plants - 88; Viruses - 0; Other Eukaryotes - 4405 (source: NCBI BLink). & (gnl|cdd|80769 : 639.0) no description available & (gnl|cdd|35458 : 578.0) no description available & (p52421|pur2_vigun : 497.0) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 1448.0) & (original description: Putative PUR2, Description = Phosphoribosylamine--glycine ligase, chloroplastic, PFAM = PF02843;PF01071;PF02844)' T '23.1.2.2' 'nucleotide metabolism.synthesis.purine.GAR Synthetase' 'niben101scf18725_13071-18416' '(at1g09830 : 721.0) glycinamide ribonucleotide synthetase (GAR synthetase) that catalyzes the conversion of phosphoribosyl amine to phosphoribosyl glycineamide; Glycinamide ribonucleotide (GAR) synthetase; FUNCTIONS IN: phosphoribosylamine-glycine ligase activity; INVOLVED IN: purine base biosynthetic process, purine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide synthetase, conserved site (InterPro:IPR020559), Phosphoribosylglycinamide synthetase, C-domain (InterPro:IPR020560), Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain (InterPro:IPR020561), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), PreATP-grasp-like fold (InterPro:IPR016185), Phosphoribosylglycinamide synthetase, N-domain (InterPro:IPR020562), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054), Phosphoribosylglycinamide synthetase (InterPro:IPR000115); Has 12648 Blast hits to 12644 proteins in 2666 species: Archae - 340; Bacteria - 7373; Metazoa - 216; Fungi - 226; Plants - 88; Viruses - 0; Other Eukaryotes - 4405 (source: NCBI BLink). & (gnl|cdd|80769 : 623.0) no description available & (gnl|cdd|35458 : 574.0) no description available & (p52421|pur2_vigun : 492.0) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 1442.0) & (original description: Putative purD, Description = Phosphoribosylamine--glycine ligase, PFAM = PF02843;PF01071;PF02844)' T '23.1.2.3' 'nucleotide metabolism.synthesis.purine.GAR transformylase' 'nbv0.3scaffold48686_12003-23695' '(p52423|pur3_vigun : 357.0) Phosphoribosylglycinamide formyltransferase, chloroplast precursor (EC 2.1.2.2) (GART) (GAR transformylase) (5'-phosphoribosylglycinamide transformylase) - Vigna unguiculata (Cowpea) & (at1g31220 : 320.0) N10-formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase that catalyzes the conversion of phosphoribosyl glycineamide to phosphoribosyl N-formylglycineamide; Formyl transferase; FUNCTIONS IN: hydroxymethyl-, formyl- and related transferase activity, phosphoribosylglycinamide formyltransferase activity, formyltetrahydrofolate deformylase activity; INVOLVED IN: purine ribonucleotide biosynthetic process, biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide formyltransferase, active site (InterPro:IPR001555), Phosphoribosylglycinamide formyltransferase (InterPro:IPR004607), Formyl transferase, N-terminal (InterPro:IPR002376); BEST Arabidopsis thaliana protein match is: Formyl transferase (TAIR:AT4G17360.1); Has 13846 Blast hits to 13846 proteins in 2648 species: Archae - 117; Bacteria - 9929; Metazoa - 318; Fungi - 202; Plants - 129; Viruses - 3; Other Eukaryotes - 3148 (source: NCBI BLink). & (gnl|cdd|30647 : 210.0) no description available & (gnl|cdd|38286 : 200.0) no description available & (reliability: 640.0) & (original description: Putative purN, Description = Phosphoribosylglycinamide formyltransferase, PFAM = PF00551)' T '23.1.2.3' 'nucleotide metabolism.synthesis.purine.GAR transformylase' 'niben101scf03209_92603-102396' '(p52423|pur3_vigun : 356.0) Phosphoribosylglycinamide formyltransferase, chloroplast precursor (EC 2.1.2.2) (GART) (GAR transformylase) (5'-phosphoribosylglycinamide transformylase) - Vigna unguiculata (Cowpea) & (at1g31220 : 322.0) N10-formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase that catalyzes the conversion of phosphoribosyl glycineamide to phosphoribosyl N-formylglycineamide; Formyl transferase; FUNCTIONS IN: hydroxymethyl-, formyl- and related transferase activity, phosphoribosylglycinamide formyltransferase activity, formyltetrahydrofolate deformylase activity; INVOLVED IN: purine ribonucleotide biosynthetic process, biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide formyltransferase, active site (InterPro:IPR001555), Phosphoribosylglycinamide formyltransferase (InterPro:IPR004607), Formyl transferase, N-terminal (InterPro:IPR002376); BEST Arabidopsis thaliana protein match is: Formyl transferase (TAIR:AT4G17360.1); Has 13846 Blast hits to 13846 proteins in 2648 species: Archae - 117; Bacteria - 9929; Metazoa - 318; Fungi - 202; Plants - 129; Viruses - 3; Other Eukaryotes - 3148 (source: NCBI BLink). & (gnl|cdd|30647 : 204.0) no description available & (gnl|cdd|38286 : 201.0) no description available & (reliability: 644.0) & (original description: Putative purN, Description = Phosphoribosylglycinamide formyltransferase, PFAM = PF00551)' T '23.1.2.4' 'nucleotide metabolism.synthesis.purine.FGAR amidotransferase' 'nbv0.3scaffold64734_9619-14588' '(at1g74260 : 1798.0) Encodes formylglycinamidine ribonucleotide synthase an enzyme involved in de novo purine biosynthesis. PUR4 is localizes to the chloroplast and mitochondria. Loss of PUR4 function affects male but not female gametophyte development.; purine biosynthesis 4 (PUR4); FUNCTIONS IN: phosphoribosylformylglycinamidine synthase activity, catalytic activity, ATP binding; INVOLVED IN: microgametogenesis, pollen development; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PurM, N-terminal-like (InterPro:IPR016188), Phosphoribosylformylglycinamidine synthase, eukaryote/proteobacteria (InterPro:IPR010073), AIR synthase related protein (InterPro:IPR000728), AIR synthase related protein, C-terminal (InterPro:IPR010918), Glutamine amidotransferase type 1 (InterPro:IPR017926); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37118 : 1566.0) no description available & (gnl|cdd|81507 : 1220.0) no description available & (reliability: 3596.0) & (original description: Putative ade2, Description = Phosphoribosylformylglycinamidine synthase, PFAM = PF02769;PF02769;PF13507)' T '23.1.2.4' 'nucleotide metabolism.synthesis.purine.FGAR amidotransferase' 'nbv0.5scaffold1073_521857-528930' '(at1g74260 : 2233.0) Encodes formylglycinamidine ribonucleotide synthase an enzyme involved in de novo purine biosynthesis. PUR4 is localizes to the chloroplast and mitochondria. Loss of PUR4 function affects male but not female gametophyte development.; purine biosynthesis 4 (PUR4); FUNCTIONS IN: phosphoribosylformylglycinamidine synthase activity, catalytic activity, ATP binding; INVOLVED IN: microgametogenesis, pollen development; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PurM, N-terminal-like (InterPro:IPR016188), Phosphoribosylformylglycinamidine synthase, eukaryote/proteobacteria (InterPro:IPR010073), AIR synthase related protein (InterPro:IPR000728), AIR synthase related protein, C-terminal (InterPro:IPR010918), Glutamine amidotransferase type 1 (InterPro:IPR017926); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37118 : 1828.0) no description available & (gnl|cdd|81507 : 1415.0) no description available & (reliability: 4466.0) & (original description: Putative ade2, Description = Phosphoribosylformylglycinamidine synthase, PFAM = PF02769;PF02769;PF13507)' T '23.1.2.4' 'nucleotide metabolism.synthesis.purine.FGAR amidotransferase' 'niben101scf02513_340988-342384' '(at1g74260 : 165.0) Encodes formylglycinamidine ribonucleotide synthase an enzyme involved in de novo purine biosynthesis. PUR4 is localizes to the chloroplast and mitochondria. Loss of PUR4 function affects male but not female gametophyte development.; purine biosynthesis 4 (PUR4); FUNCTIONS IN: phosphoribosylformylglycinamidine synthase activity, catalytic activity, ATP binding; INVOLVED IN: microgametogenesis, pollen development; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PurM, N-terminal-like (InterPro:IPR016188), Phosphoribosylformylglycinamidine synthase, eukaryote/proteobacteria (InterPro:IPR010073), AIR synthase related protein (InterPro:IPR000728), AIR synthase related protein, C-terminal (InterPro:IPR010918), Glutamine amidotransferase type 1 (InterPro:IPR017926); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37118 : 151.0) no description available & (gnl|cdd|81507 : 106.0) no description available & (reliability: 330.0) & (original description: Putative ade2, Description = Phosphoribosylformylglycinamidine synthase, PFAM = )' T '23.1.2.5' 'nucleotide metabolism.synthesis.purine.AIR synthase' 'nbv0.3scaffold5287_24674-30275' '(at3g55010 : 516.0) encoding phosphoribosylformylglycinamidine cyclo-ligase (syn. AIR synthetase)that phosphorylates 5-phosphoribosyl-N-formylglycinamidine (FGAM) to form 5-aminoimidazole ribonucleotide (AIR); PUR5; FUNCTIONS IN: phosphoribosylformylglycinamidine cyclo-ligase activity, copper ion binding, ATP binding; INVOLVED IN: purine nucleotide biosynthetic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PurM, N-terminal-like (InterPro:IPR016188), AIR synthase related protein (InterPro:IPR000728), AIR synthase related protein, C-terminal (InterPro:IPR010918), Phosphoribosylformylglycinamidine cyclo-ligase (InterPro:IPR004733); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p52424|pur5_vigun : 506.0) Phosphoribosylformylglycinamidine cyclo-ligase, chloroplast/mitochondrial precursor (EC 6.3.3.1) (AIRS) (Phosphoribosyl-aminoimidazole synthetase) (AIR synthase) (VUpur5) - Vigna unguiculata (Cowpea) & (gnl|cdd|81557 : 484.0) no description available & (gnl|cdd|35458 : 475.0) no description available & (reliability: 1032.0) & (original description: Putative PUR5, Description = Phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial, PFAM = PF00586;PF02769)' T '23.1.2.5' 'nucleotide metabolism.synthesis.purine.AIR synthase' 'niben101scf05029_52113-57674' '(at3g55010 : 520.0) encoding phosphoribosylformylglycinamidine cyclo-ligase (syn. AIR synthetase)that phosphorylates 5-phosphoribosyl-N-formylglycinamidine (FGAM) to form 5-aminoimidazole ribonucleotide (AIR); PUR5; FUNCTIONS IN: phosphoribosylformylglycinamidine cyclo-ligase activity, copper ion binding, ATP binding; INVOLVED IN: purine nucleotide biosynthetic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PurM, N-terminal-like (InterPro:IPR016188), AIR synthase related protein (InterPro:IPR000728), AIR synthase related protein, C-terminal (InterPro:IPR010918), Phosphoribosylformylglycinamidine cyclo-ligase (InterPro:IPR004733); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p52424|pur5_vigun : 504.0) Phosphoribosylformylglycinamidine cyclo-ligase, chloroplast/mitochondrial precursor (EC 6.3.3.1) (AIRS) (Phosphoribosyl-aminoimidazole synthetase) (AIR synthase) (VUpur5) - Vigna unguiculata (Cowpea) & (gnl|cdd|81557 : 488.0) no description available & (gnl|cdd|35458 : 480.0) no description available & (reliability: 1040.0) & (original description: Putative PUR5, Description = Phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic, PFAM = PF00586;PF02769)' T '23.1.2.6' 'nucleotide metabolism.synthesis.purine.AIR carboxylase' 'niben101scf04738_477841-487611' '(at2g37690 : 829.0) phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase, putative; FUNCTIONS IN: phosphoribosylaminoimidazole carboxylase activity, catalytic activity, ATP binding; INVOLVED IN: 'de novo' IMP biosynthetic process, pollen development; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Phosphoribosylaminoimidazole carboxylase (InterPro:IPR016301), PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type (InterPro:IPR003135), Phosphoribosylaminoimidazole carboxylase, ATPase subunit (InterPro:IPR005875), 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase (InterPro:IPR000031), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054); BEST Arabidopsis thaliana protein match is: phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family protein (TAIR:AT2G05140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30376 : 406.0) no description available & (gnl|cdd|38046 : 340.0) no description available & (reliability: 1658.0) & (original description: Putative PURKE, Description = Phosphoribosylaminoimidazole carboxylase, chloroplastic, PFAM = PF00731;PF02222)' T '23.1.2.7' 'nucleotide metabolism.synthesis.purine.SAICAR synthetase' 'niben101scf04981_17946-46363' '(at3g21110 : 570.0) 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole synthetase (PUR7, syn. SAICAR synthetase), catalyzes aspartate addition at the alpha-amino group to the growing purine backbone.; purin 7 (PUR7); FUNCTIONS IN: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity; INVOLVED IN: response to auxin stimulus, purine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SAICAR synthetase, conserved site (InterPro:IPR018236), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), SAICAR synthetase (InterPro:IPR001636); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|79072 : 345.0) no description available & (gnl|cdd|38046 : 188.0) no description available & (reliability: 1140.0) & (original description: Putative PUR7, Description = Phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic, PFAM = PF01259)' T '23.1.2.7' 'nucleotide metabolism.synthesis.purine.SAICAR synthetase' 'niben101scf05596_19667-26854' '(at3g21110 : 555.0) 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole synthetase (PUR7, syn. SAICAR synthetase), catalyzes aspartate addition at the alpha-amino group to the growing purine backbone.; purin 7 (PUR7); FUNCTIONS IN: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity; INVOLVED IN: response to auxin stimulus, purine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SAICAR synthetase, conserved site (InterPro:IPR018236), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), SAICAR synthetase (InterPro:IPR001636); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|79072 : 337.0) no description available & (gnl|cdd|38046 : 186.0) no description available & (reliability: 1110.0) & (original description: Putative purC, Description = Phosphoribosylaminoimidazole-succinocarboxamide synthase, PFAM = PF01259)' T '23.1.2.8' 'nucleotide metabolism.synthesis.purine.SAICAR lyase' 'niben101scf01409_1339527-1347317' '(gnl|cdd|82914 : 789.0) no description available & (at1g36280 : 713.0) L-Aspartase-like family protein; FUNCTIONS IN: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity, catalytic activity; INVOLVED IN: purine ribonucleotide biosynthetic process, IMP biosynthetic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: L-Aspartase-like (InterPro:IPR008948), Adenylosuccinate lyase C-terminal/plant (InterPro:IPR013539), Adenylosuccinate lyase (InterPro:IPR004769), Fumarate lyase, conserved site (InterPro:IPR020557), Lyase 1, N-terminal (InterPro:IPR022761), Fumarate lyase (InterPro:IPR000362); BEST Arabidopsis thaliana protein match is: L-Aspartase-like family protein (TAIR:AT4G18440.1). & (gnl|cdd|37911 : 330.0) no description available & (reliability: 1426.0) & (original description: Putative purB, Description = Adenylosuccinate lyase, PFAM = PF08328;PF00206)' T '23.1.2.8' 'nucleotide metabolism.synthesis.purine.SAICAR lyase' 'niben101scf11123_127654-134930' '(gnl|cdd|82914 : 787.0) no description available & (at1g36280 : 716.0) L-Aspartase-like family protein; FUNCTIONS IN: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity, catalytic activity; INVOLVED IN: purine ribonucleotide biosynthetic process, IMP biosynthetic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: L-Aspartase-like (InterPro:IPR008948), Adenylosuccinate lyase C-terminal/plant (InterPro:IPR013539), Adenylosuccinate lyase (InterPro:IPR004769), Fumarate lyase, conserved site (InterPro:IPR020557), Lyase 1, N-terminal (InterPro:IPR022761), Fumarate lyase (InterPro:IPR000362); BEST Arabidopsis thaliana protein match is: L-Aspartase-like family protein (TAIR:AT4G18440.1). & (gnl|cdd|37911 : 330.0) no description available & (reliability: 1432.0) & (original description: Putative purB, Description = Adenylosuccinate lyase, PFAM = PF08328;PF00206)' T '23.1.2.9' 'nucleotide metabolism.synthesis.purine.AICAR transformylase' 'nbv0.5scaffold3009_198925-209723' '(at2g35040 : 957.0) AICARFT/IMPCHase bienzyme family protein; FUNCTIONS IN: phosphoribosylaminoimidazolecarboxamide formyltransferase activity, IMP cyclohydrolase activity, catalytic activity; INVOLVED IN: response to cold, purine nucleotide biosynthetic process; LOCATED IN: stromule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AICARFT/IMPCHase bienzyme, transformylase domain (InterPro:IPR013982), AICARFT/IMPCHase bienzyme (InterPro:IPR002695), MGS-like (InterPro:IPR011607). & (gnl|cdd|80768 : 665.0) no description available & (gnl|cdd|37766 : 514.0) no description available & (reliability: 1914.0) & (original description: Putative purH, Description = Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, PFAM = PF02142;PF01808)' T '23.1.2.9' 'nucleotide metabolism.synthesis.purine.AICAR transformylase' 'niben101scf01739_360413-369648' '(at2g35040 : 958.0) AICARFT/IMPCHase bienzyme family protein; FUNCTIONS IN: phosphoribosylaminoimidazolecarboxamide formyltransferase activity, IMP cyclohydrolase activity, catalytic activity; INVOLVED IN: response to cold, purine nucleotide biosynthetic process; LOCATED IN: stromule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AICARFT/IMPCHase bienzyme, transformylase domain (InterPro:IPR013982), AICARFT/IMPCHase bienzyme (InterPro:IPR002695), MGS-like (InterPro:IPR011607). & (gnl|cdd|80768 : 667.0) no description available & (gnl|cdd|37766 : 514.0) no description available & (reliability: 1916.0) & (original description: Putative purH, Description = Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, PFAM = PF01808;PF02142)' T '23.1.2.10' 'nucleotide metabolism.synthesis.purine.IMP synthase' '' '' '23.1.2.20' 'nucleotide metabolism.synthesis.purine.adenylosuccinate synthase' 'nbv0.3scaffold48692_2802-7732' '(at3g57610 : 802.0) encoding adenylosuccinate synthetase (AdSS), the enzyme involved in the first step of the formation of the purine nucleotide AMP (conversion of IMP to adenylo-succinate); adenylosuccinate synthase (ADSS); FUNCTIONS IN: adenylosuccinate synthase activity; INVOLVED IN: response to cadmium ion, purine ribonucleotide biosynthetic process, AMP biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Adenylosuccinate synthase, active site (InterPro:IPR018220), Adenylosuccinate synthetase (InterPro:IPR001114); Has 10496 Blast hits to 10490 proteins in 2781 species: Archae - 222; Bacteria - 5613; Metazoa - 213; Fungi - 143; Plants - 71; Viruses - 18; Other Eukaryotes - 4216 (source: NCBI BLink). & (o24396|pura_wheat : 741.0) Adenylosuccinate synthetase, chloroplast precursor (EC 6.3.4.4) (IMP--aspartate ligase) (AdSS) (AMPSase) (Fragment) - Triticum aestivum (Wheat) & (gnl|cdd|36569 : 625.0) no description available & (gnl|cdd|84969 : 613.0) no description available & (reliability: 1604.0) & (original description: Putative ade2, Description = AMPSase, PFAM = PF00709)' T '23.1.2.20' 'nucleotide metabolism.synthesis.purine.adenylosuccinate synthase' 'nbv0.5scaffold611_603066-607641' '(at3g57610 : 518.0) encoding adenylosuccinate synthetase (AdSS), the enzyme involved in the first step of the formation of the purine nucleotide AMP (conversion of IMP to adenylo-succinate); adenylosuccinate synthase (ADSS); FUNCTIONS IN: adenylosuccinate synthase activity; INVOLVED IN: response to cadmium ion, purine ribonucleotide biosynthetic process, AMP biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Adenylosuccinate synthase, active site (InterPro:IPR018220), Adenylosuccinate synthetase (InterPro:IPR001114); Has 10496 Blast hits to 10490 proteins in 2781 species: Archae - 222; Bacteria - 5613; Metazoa - 213; Fungi - 143; Plants - 71; Viruses - 18; Other Eukaryotes - 4216 (source: NCBI BLink). & (o24396|pura_wheat : 482.0) Adenylosuccinate synthetase, chloroplast precursor (EC 6.3.4.4) (IMP--aspartate ligase) (AdSS) (AMPSase) (Fragment) - Triticum aestivum (Wheat) & (gnl|cdd|36569 : 392.0) no description available & (gnl|cdd|84969 : 377.0) no description available & (reliability: 1036.0) & (original description: Putative ade2, Description = AMPSase, PFAM = PF00709)' T '23.1.2.20' 'nucleotide metabolism.synthesis.purine.adenylosuccinate synthase' 'niben044scf00012047ctg009_1-3665' '(at3g57610 : 733.0) encoding adenylosuccinate synthetase (AdSS), the enzyme involved in the first step of the formation of the purine nucleotide AMP (conversion of IMP to adenylo-succinate); adenylosuccinate synthase (ADSS); FUNCTIONS IN: adenylosuccinate synthase activity; INVOLVED IN: response to cadmium ion, purine ribonucleotide biosynthetic process, AMP biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Adenylosuccinate synthase, active site (InterPro:IPR018220), Adenylosuccinate synthetase (InterPro:IPR001114); Has 10496 Blast hits to 10490 proteins in 2781 species: Archae - 222; Bacteria - 5613; Metazoa - 213; Fungi - 143; Plants - 71; Viruses - 18; Other Eukaryotes - 4216 (source: NCBI BLink). & (o24396|pura_wheat : 678.0) Adenylosuccinate synthetase, chloroplast precursor (EC 6.3.4.4) (IMP--aspartate ligase) (AdSS) (AMPSase) (Fragment) - Triticum aestivum (Wheat) & (gnl|cdd|36569 : 576.0) no description available & (gnl|cdd|84969 : 564.0) no description available & (reliability: 1466.0) & (original description: Putative PURA, Description = Adenylosuccinate synthetase, chloroplastic, PFAM = PF00709;PF00709)' T '23.1.2.20' 'nucleotide metabolism.synthesis.purine.adenylosuccinate synthase' 'niben101scf00735_273224-278925' '(at3g57610 : 810.0) encoding adenylosuccinate synthetase (AdSS), the enzyme involved in the first step of the formation of the purine nucleotide AMP (conversion of IMP to adenylo-succinate); adenylosuccinate synthase (ADSS); FUNCTIONS IN: adenylosuccinate synthase activity; INVOLVED IN: response to cadmium ion, purine ribonucleotide biosynthetic process, AMP biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Adenylosuccinate synthase, active site (InterPro:IPR018220), Adenylosuccinate synthetase (InterPro:IPR001114); Has 10496 Blast hits to 10490 proteins in 2781 species: Archae - 222; Bacteria - 5613; Metazoa - 213; Fungi - 143; Plants - 71; Viruses - 18; Other Eukaryotes - 4216 (source: NCBI BLink). & (o24396|pura_wheat : 743.0) Adenylosuccinate synthetase, chloroplast precursor (EC 6.3.4.4) (IMP--aspartate ligase) (AdSS) (AMPSase) (Fragment) - Triticum aestivum (Wheat) & (gnl|cdd|36569 : 624.0) no description available & (gnl|cdd|84969 : 610.0) no description available & (reliability: 1620.0) & (original description: Putative PURA, Description = Adenylosuccinate synthetase, chloroplastic, PFAM = PF00709)' T '23.1.2.20' 'nucleotide metabolism.synthesis.purine.adenylosuccinate synthase' 'niben101scf03686_88673-93507' '(at3g57610 : 805.0) encoding adenylosuccinate synthetase (AdSS), the enzyme involved in the first step of the formation of the purine nucleotide AMP (conversion of IMP to adenylo-succinate); adenylosuccinate synthase (ADSS); FUNCTIONS IN: adenylosuccinate synthase activity; INVOLVED IN: response to cadmium ion, purine ribonucleotide biosynthetic process, AMP biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Adenylosuccinate synthase, active site (InterPro:IPR018220), Adenylosuccinate synthetase (InterPro:IPR001114); Has 10496 Blast hits to 10490 proteins in 2781 species: Archae - 222; Bacteria - 5613; Metazoa - 213; Fungi - 143; Plants - 71; Viruses - 18; Other Eukaryotes - 4216 (source: NCBI BLink). & (o24396|pura_wheat : 747.0) Adenylosuccinate synthetase, chloroplast precursor (EC 6.3.4.4) (IMP--aspartate ligase) (AdSS) (AMPSase) (Fragment) - Triticum aestivum (Wheat) & (gnl|cdd|36569 : 629.0) no description available & (gnl|cdd|84969 : 612.0) no description available & (reliability: 1610.0) & (original description: Putative PURA, Description = Adenylosuccinate synthetase, chloroplastic, PFAM = PF00709)' T '23.1.2.20' 'nucleotide metabolism.synthesis.purine.adenylosuccinate synthase' 'niben101scf04001_284851-289781' '(at3g57610 : 724.0) encoding adenylosuccinate synthetase (AdSS), the enzyme involved in the first step of the formation of the purine nucleotide AMP (conversion of IMP to adenylo-succinate); adenylosuccinate synthase (ADSS); FUNCTIONS IN: adenylosuccinate synthase activity; INVOLVED IN: response to cadmium ion, purine ribonucleotide biosynthetic process, AMP biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Adenylosuccinate synthase, active site (InterPro:IPR018220), Adenylosuccinate synthetase (InterPro:IPR001114); Has 10496 Blast hits to 10490 proteins in 2781 species: Archae - 222; Bacteria - 5613; Metazoa - 213; Fungi - 143; Plants - 71; Viruses - 18; Other Eukaryotes - 4216 (source: NCBI BLink). & (o24396|pura_wheat : 675.0) Adenylosuccinate synthetase, chloroplast precursor (EC 6.3.4.4) (IMP--aspartate ligase) (AdSS) (AMPSase) (Fragment) - Triticum aestivum (Wheat) & (gnl|cdd|36569 : 560.0) no description available & (gnl|cdd|84969 : 552.0) no description available & (reliability: 1448.0) & (original description: Putative ade2, Description = AMPSase, PFAM = PF00709;PF00709)' T '23.1.2.30' 'nucleotide metabolism.synthesis.purine.IMP dehydrogenase' 'nbv0.5scaffold7573_57711-62694' '(at1g16350 : 637.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: IMP dehydrogenase activity, oxidoreductase activity, catalytic activity; INVOLVED IN: oxidation reduction, GMP biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IMP dehydrogenase (InterPro:IPR005990), IMP dehydrogenase related (InterPro:IPR018529), Aldolase-type TIM barrel (InterPro:IPR013785), IMP dehydrogenase/GMP reductase (InterPro:IPR001093), IMP dehydrogenase / GMP reductase, conserved site (InterPro:IPR015875); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT1G79470.1); Has 13531 Blast hits to 12775 proteins in 2707 species: Archae - 178; Bacteria - 7353; Metazoa - 466; Fungi - 180; Plants - 86; Viruses - 2; Other Eukaryotes - 5266 (source: NCBI BLink). & (gnl|cdd|37761 : 560.0) no description available & (gnl|cdd|84798 : 504.0) no description available & (reliability: 1274.0) & (original description: Putative guaB, Description = Inosine-5'-phosphate dehydrogenase, PFAM = PF00478)' T '23.1.2.30' 'nucleotide metabolism.synthesis.purine.IMP dehydrogenase' 'niben101scf20034_30515-35316' '(at1g16350 : 626.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: IMP dehydrogenase activity, oxidoreductase activity, catalytic activity; INVOLVED IN: oxidation reduction, GMP biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IMP dehydrogenase (InterPro:IPR005990), IMP dehydrogenase related (InterPro:IPR018529), Aldolase-type TIM barrel (InterPro:IPR013785), IMP dehydrogenase/GMP reductase (InterPro:IPR001093), IMP dehydrogenase / GMP reductase, conserved site (InterPro:IPR015875); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT1G79470.1); Has 13531 Blast hits to 12775 proteins in 2707 species: Archae - 178; Bacteria - 7353; Metazoa - 466; Fungi - 180; Plants - 86; Viruses - 2; Other Eukaryotes - 5266 (source: NCBI BLink). & (gnl|cdd|37761 : 562.0) no description available & (gnl|cdd|84798 : 507.0) no description available & (reliability: 1252.0) & (original description: Putative guaB, Description = Inosine-5'-phosphate dehydrogenase, PFAM = PF00478)' T '23.1.2.31' 'nucleotide metabolism.synthesis.purine.GMP synthetase' 'niben101scf06589_41745-48024' '(at1g63660 : 875.0) GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative; FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity, GMP synthase (glutamine-hydrolyzing) activity, catalytic activity, ATP binding; INVOLVED IN: GMP biosynthetic process, glutamine metabolic process, biosynthetic process, asparagine biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), GMP synthase, N-terminal (InterPro:IPR004739), Glutamine amidotransferase type 1 (InterPro:IPR017926), Asparagine synthase (InterPro:IPR001962), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80492 : 759.0) no description available & (gnl|cdd|36835 : 626.0) no description available & (reliability: 1750.0) & (original description: Putative guaA, Description = GMP synthase [glutamine-hydrolyzing], PFAM = PF00958;PF00117)' T '23.1.2.31' 'nucleotide metabolism.synthesis.purine.GMP synthetase' 'niben101scf11689_22716-28537' '(at1g63660 : 822.0) GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative; FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity, GMP synthase (glutamine-hydrolyzing) activity, catalytic activity, ATP binding; INVOLVED IN: GMP biosynthetic process, glutamine metabolic process, biosynthetic process, asparagine biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), GMP synthase, N-terminal (InterPro:IPR004739), Glutamine amidotransferase type 1 (InterPro:IPR017926), Asparagine synthase (InterPro:IPR001962), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80492 : 718.0) no description available & (gnl|cdd|36835 : 581.0) no description available & (reliability: 1644.0) & (original description: Putative guaA, Description = GMP synthase [glutamine-hydrolyzing], PFAM = PF00958;PF00117)' T '23.1.2.1001' 'nucleotide metabolism.synthesis.purine' 'dihydroorotate' 'Co-factor metabolism; nucleotide metabolism' M '23.1.2.1002' 'nucleotide metabolism.synthesis.purine' 'orotate' 'Co-factor metabolism; nucleotide metabolism' M '23.1.2.1003' 'nucleotide metabolism.synthesis.purine' 'uridine' 'Co-factor metabolism; nucleotide metabolism' M '23.1.2.1004' 'nucleotide metabolism.synthesis.purine' 'ump' 'Co-factor metabolism; nucleotide metabolism' M '23.1.2.1005' 'nucleotide metabolism.synthesis.purine' 'udp' 'Co-factor metabolism; nucleotide metabolism' M '23.1.2.1006' 'nucleotide metabolism.synthesis.purine' 'utp' 'Co-factor metabolism; nucleotide metabolism' M '23.1.2.1007' 'nucleotide metabolism.synthesis.purine' 'guanine' 'Co-factor metabolism; nucleotide metabolism' M '23.1.2.1008' 'nucleotide metabolism.synthesis.purine' 'guanosine' 'Co-factor metabolism; nucleotide metabolism' M '23.1.2.1009' 'nucleotide metabolism.synthesis.purine' 'gmp' 'Co-factor metabolism; nucleotide metabolism' M '23.1.2.1010' 'nucleotide metabolism.synthesis.purine' 'gdp' 'Co-factor metabolism; nucleotide metabolism' M '23.1.2.1011' 'nucleotide metabolism.synthesis.purine' 'gtp' 'Co-factor metabolism; nucleotide metabolism' M '23.1.2.1012' 'nucleotide metabolism.synthesis.purine' 'inosine' 'Co-factor metabolism; nucleotide metabolism' M '23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'nbv0.3scaffold35709_14489-21678' '(at2g35390 : 464.0) Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.10 ten leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 2 (TAIR:AT1G32380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9xg99|kprs2_spiol : 452.0) Ribose-phosphate pyrophosphokinase 2, chloroplast precursor (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 2) - Spinacia oleracea (Spinach) & (gnl|cdd|81041 : 352.0) no description available & (gnl|cdd|36661 : 302.0) no description available & (reliability: 928.0) & (original description: Putative PRS1, Description = Ribose-phosphate pyrophosphokinase 1, PFAM = PF13793;PF14572)' T '23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'nbv0.3scaffold67506_3244-8716' '(at2g42910 : 524.0) Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: nucleotide biosynthetic process, nucleoside metabolic process; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 3 (TAIR:AT1G10700.1); Has 8791 Blast hits to 8791 proteins in 2571 species: Archae - 151; Bacteria - 5499; Metazoa - 381; Fungi - 325; Plants - 200; Viruses - 13; Other Eukaryotes - 2222 (source: NCBI BLink). & (q9xga1|kprs4_spiol : 516.0) Ribose-phosphate pyrophosphokinase 4 (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 4) - Spinacia oleracea (Spinach) & (gnl|cdd|36661 : 280.0) no description available & (gnl|cdd|30810 : 122.0) no description available & (reliability: 1048.0) & (original description: Putative v1g119080, Description = Predicted protein, PFAM = PF00156)' T '23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'nbv0.3scaffold77046_1-5609' '(at1g32380 : 419.0) Encodes a P-dependent phosphoribosyl pyrophosphate (PRPP) synthase.; phosphoribosyl pyrophosphate (PRPP) synthase 2 (PRS2); FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: Phosphoribosyltransferase family protein (TAIR:AT2G35390.2); Has 11410 Blast hits to 11162 proteins in 2771 species: Archae - 272; Bacteria - 6075; Metazoa - 636; Fungi - 714; Plants - 210; Viruses - 13; Other Eukaryotes - 3490 (source: NCBI BLink). & (q9xg99|kprs2_spiol : 408.0) Ribose-phosphate pyrophosphokinase 2, chloroplast precursor (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 2) - Spinacia oleracea (Spinach) & (gnl|cdd|81041 : 347.0) no description available & (gnl|cdd|36661 : 276.0) no description available & (reliability: 838.0) & (original description: Putative kprS, Description = 5-phospho-D-ribosyl alpha-1-diphosphate, PFAM = PF13793)' T '23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'nbv0.5scaffold1446_219240-233077' '(q9xga0|kprs3_spiol : 463.0) Ribose-phosphate pyrophosphokinase 3, mitochondrial precursor (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 3) - Spinacia oleracea (Spinach) & (at1g10700 : 447.0) Encodes a P-independent phosphoribosyl pyrophosphate (PRPP) synthase.; phosphoribosyl pyrophosphate (PRPP) synthase 3 (PRS3); FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: nucleotide biosynthetic process, nucleoside metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946); BEST Arabidopsis thaliana protein match is: Phosphoribosyltransferase family protein (TAIR:AT2G42910.1); Has 9536 Blast hits to 9535 proteins in 2732 species: Archae - 207; Bacteria - 5887; Metazoa - 527; Fungi - 344; Plants - 201; Viruses - 8; Other Eukaryotes - 2362 (source: NCBI BLink). & (gnl|cdd|36661 : 243.0) no description available & (gnl|cdd|30810 : 96.8) no description available & (reliability: 894.0) & (original description: Putative PRS4, Description = Ribose-phosphate pyrophosphokinase 4, PFAM = PF00156;PF13793)' T '23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'niben044scf00016273ctg016_1-14751' '(q9xga0|kprs3_spiol : 574.0) Ribose-phosphate pyrophosphokinase 3, mitochondrial precursor (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 3) - Spinacia oleracea (Spinach) & (at1g10700 : 544.0) Encodes a P-independent phosphoribosyl pyrophosphate (PRPP) synthase.; phosphoribosyl pyrophosphate (PRPP) synthase 3 (PRS3); FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: nucleotide biosynthetic process, nucleoside metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946); BEST Arabidopsis thaliana protein match is: Phosphoribosyltransferase family protein (TAIR:AT2G42910.1); Has 9536 Blast hits to 9535 proteins in 2732 species: Archae - 207; Bacteria - 5887; Metazoa - 527; Fungi - 344; Plants - 201; Viruses - 8; Other Eukaryotes - 2362 (source: NCBI BLink). & (gnl|cdd|36661 : 297.0) no description available & (gnl|cdd|30810 : 133.0) no description available & (reliability: 1088.0) & (original description: Putative PRS3, Description = Ribose-phosphate pyrophosphokinase 3, mitochondrial, PFAM = PF13793;PF00156)' T '23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'niben044scf00041062ctg001_1-5355' '(at1g32380 : 545.0) Encodes a P-dependent phosphoribosyl pyrophosphate (PRPP) synthase.; phosphoribosyl pyrophosphate (PRPP) synthase 2 (PRS2); FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: Phosphoribosyltransferase family protein (TAIR:AT2G35390.2); Has 11410 Blast hits to 11162 proteins in 2771 species: Archae - 272; Bacteria - 6075; Metazoa - 636; Fungi - 714; Plants - 210; Viruses - 13; Other Eukaryotes - 3490 (source: NCBI BLink). & (q9xg99|kprs2_spiol : 541.0) Ribose-phosphate pyrophosphokinase 2, chloroplast precursor (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 2) - Spinacia oleracea (Spinach) & (gnl|cdd|81041 : 482.0) no description available & (gnl|cdd|36661 : 383.0) no description available & (reliability: 1090.0) & (original description: Putative PRS1, Description = Ribose-phosphate pyrophosphokinase 1, PFAM = PF13793;PF14572)' T '23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'niben101scf00497_645378-656140' '(at2g35390 : 628.0) Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.10 ten leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 2 (TAIR:AT1G32380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9xg99|kprs2_spiol : 617.0) Ribose-phosphate pyrophosphokinase 2, chloroplast precursor (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 2) - Spinacia oleracea (Spinach) & (gnl|cdd|81041 : 530.0) no description available & (gnl|cdd|36661 : 421.0) no description available & (reliability: 1256.0) & (original description: Putative PRS2, Description = Ribose-phosphate pyrophosphokinase 2, chloroplastic, PFAM = PF13793;PF14572)' T '23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'niben101scf01211_404408-417459' '(at2g44530 : 619.0) Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 2 (TAIR:AT1G32380.1); Has 11359 Blast hits to 11120 proteins in 2784 species: Archae - 259; Bacteria - 6102; Metazoa - 636; Fungi - 683; Plants - 217; Viruses - 13; Other Eukaryotes - 3449 (source: NCBI BLink). & (q9xg98|kprs1_spiol : 613.0) Ribose-phosphate pyrophosphokinase 1 (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 1) - Spinacia oleracea (Spinach) & (gnl|cdd|81041 : 527.0) no description available & (gnl|cdd|36661 : 415.0) no description available & (reliability: 1238.0) & (original description: Putative PRS5, Description = Ribose-phosphate pyrophosphokinase 5, chloroplastic, PFAM = PF14572;PF13793)' T '23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'niben101scf01414_245009-250471' '(q9xga1|kprs4_spiol : 548.0) Ribose-phosphate pyrophosphokinase 4 (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 4) - Spinacia oleracea (Spinach) & (at2g42910 : 546.0) Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: nucleotide biosynthetic process, nucleoside metabolic process; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 3 (TAIR:AT1G10700.1); Has 8791 Blast hits to 8791 proteins in 2571 species: Archae - 151; Bacteria - 5499; Metazoa - 381; Fungi - 325; Plants - 200; Viruses - 13; Other Eukaryotes - 2222 (source: NCBI BLink). & (gnl|cdd|36661 : 301.0) no description available & (gnl|cdd|30810 : 129.0) no description available & (reliability: 1092.0) & (original description: Putative PRS4, Description = Ribose-phosphate pyrophosphokinase 4, PFAM = PF00156;PF13793)' T '23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'niben101scf03045_980381-995987' '(q9xga0|kprs3_spiol : 576.0) Ribose-phosphate pyrophosphokinase 3, mitochondrial precursor (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 3) - Spinacia oleracea (Spinach) & (at1g10700 : 555.0) Encodes a P-independent phosphoribosyl pyrophosphate (PRPP) synthase.; phosphoribosyl pyrophosphate (PRPP) synthase 3 (PRS3); FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: nucleotide biosynthetic process, nucleoside metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946); BEST Arabidopsis thaliana protein match is: Phosphoribosyltransferase family protein (TAIR:AT2G42910.1); Has 9536 Blast hits to 9535 proteins in 2732 species: Archae - 207; Bacteria - 5887; Metazoa - 527; Fungi - 344; Plants - 201; Viruses - 8; Other Eukaryotes - 2362 (source: NCBI BLink). & (gnl|cdd|36661 : 299.0) no description available & (gnl|cdd|30810 : 134.0) no description available & (reliability: 1110.0) & (original description: Putative PRS3, Description = Ribose-phosphate pyrophosphokinase 3, mitochondrial, PFAM = PF13793;PF00156)' T '23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'niben101scf04754_393765-401441' '(at2g42910 : 545.0) Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: nucleotide biosynthetic process, nucleoside metabolic process; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 3 (TAIR:AT1G10700.1); Has 8791 Blast hits to 8791 proteins in 2571 species: Archae - 151; Bacteria - 5499; Metazoa - 381; Fungi - 325; Plants - 200; Viruses - 13; Other Eukaryotes - 2222 (source: NCBI BLink). & (q9xga1|kprs4_spiol : 538.0) Ribose-phosphate pyrophosphokinase 4 (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 4) - Spinacia oleracea (Spinach) & (gnl|cdd|36661 : 298.0) no description available & (gnl|cdd|30810 : 124.0) no description available & (reliability: 1090.0) & (original description: Putative PRS4, Description = Ribose-phosphate pyrophosphokinase 4, PFAM = PF00156)' T '23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'niben101scf05490_134494-165506' '(at2g35390 : 624.0) Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.10 ten leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 2 (TAIR:AT1G32380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9xg99|kprs2_spiol : 615.0) Ribose-phosphate pyrophosphokinase 2, chloroplast precursor (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 2) - Spinacia oleracea (Spinach) & (gnl|cdd|81041 : 525.0) no description available & (gnl|cdd|36661 : 416.0) no description available & (reliability: 1248.0) & (original description: Putative PRS2, Description = Ribose-phosphate pyrophosphokinase 2, chloroplastic, PFAM = PF14572;PF13793)' T '23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'niben101scf11685_141754-150108' '(at1g32380 : 597.0) Encodes a P-dependent phosphoribosyl pyrophosphate (PRPP) synthase.; phosphoribosyl pyrophosphate (PRPP) synthase 2 (PRS2); FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: Phosphoribosyltransferase family protein (TAIR:AT2G35390.2); Has 11410 Blast hits to 11162 proteins in 2771 species: Archae - 272; Bacteria - 6075; Metazoa - 636; Fungi - 714; Plants - 210; Viruses - 13; Other Eukaryotes - 3490 (source: NCBI BLink). & (q9xg99|kprs2_spiol : 597.0) Ribose-phosphate pyrophosphokinase 2, chloroplast precursor (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 2) - Spinacia oleracea (Spinach) & (gnl|cdd|81041 : 519.0) no description available & (gnl|cdd|36661 : 410.0) no description available & (reliability: 1194.0) & (original description: Putative PRS2, Description = Ribose-phosphate pyrophosphokinase 2, chloroplastic, PFAM = PF13793;PF14572)' T '23.1.99' 'nucleotide metabolism.synthesis.unspecified' 'niben044scf00007886ctg007_125-7425' '(at2g23970 : 276.0) Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT4G30550.1); Has 5842 Blast hits to 5842 proteins in 1417 species: Archae - 309; Bacteria - 2944; Metazoa - 13; Fungi - 191; Plants - 97; Viruses - 3; Other Eukaryotes - 2285 (source: NCBI BLink). & (gnl|cdd|38389 : 251.0) no description available & (gnl|cdd|73284 : 149.0) no description available & (reliability: 506.0) & (original description: Putative GGP5, Description = Gamma-glutamyl peptidase 5, PFAM = PF00117)' T '23.1.99' 'nucleotide metabolism.synthesis.unspecified' 'niben101scf00062_105564-113579' '(at2g23970 : 275.0) Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT4G30550.1); Has 5842 Blast hits to 5842 proteins in 1417 species: Archae - 309; Bacteria - 2944; Metazoa - 13; Fungi - 191; Plants - 97; Viruses - 3; Other Eukaryotes - 2285 (source: NCBI BLink). & (gnl|cdd|38389 : 255.0) no description available & (gnl|cdd|73284 : 148.0) no description available & (reliability: 508.0) & (original description: Putative GGP5, Description = Gamma-glutamyl peptidase 5, PFAM = PF00117)' T '23.1.99' 'nucleotide metabolism.synthesis.unspecified' 'niben101scf03736_281683-286208' '(gnl|cdd|38389 : 279.0) no description available & (at4g30550 : 259.0) Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: catalytic activity, acyltransferase activity; INVOLVED IN: L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine; LOCATED IN: endomembrane system, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Homoserine O-succinyltransferase (InterPro:IPR005697), Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT2G23970.1); Has 7193 Blast hits to 7193 proteins in 1745 species: Archae - 322; Bacteria - 3933; Metazoa - 5; Fungi - 197; Plants - 101; Viruses - 0; Other Eukaryotes - 2635 (source: NCBI BLink). & (gnl|cdd|73284 : 153.0) no description available & (reliability: 518.0) & (original description: Putative GGP3, Description = Gamma-glutamyl peptidase 3, PFAM = PF00117)' T '23.1.99' 'nucleotide metabolism.synthesis.unspecified' 'niben101scf08876_67888-71288' '(gnl|cdd|38389 : 234.0) no description available & (at4g30550 : 215.0) Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: catalytic activity, acyltransferase activity; INVOLVED IN: L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine; LOCATED IN: endomembrane system, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Homoserine O-succinyltransferase (InterPro:IPR005697), Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT2G23970.1); Has 7193 Blast hits to 7193 proteins in 1745 species: Archae - 322; Bacteria - 3933; Metazoa - 5; Fungi - 197; Plants - 101; Viruses - 0; Other Eukaryotes - 2635 (source: NCBI BLink). & (gnl|cdd|73284 : 136.0) no description available & (reliability: 430.0) & (original description: Putative GGP3, Description = Gamma-glutamyl peptidase 3, PFAM = PF00117)' T '23.2' 'nucleotide metabolism.degradation' 'nbv0.3scaffold80_4519-12682' '(at5g18860 : 1152.0) inosine-uridine preferring nucleoside hydrolase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; CONTAINS InterPro DOMAIN/s: Inosine/uridine-preferring nucleoside hydrolase (InterPro:IPR001910); BEST Arabidopsis thaliana protein match is: Inosine-uridine preferring nucleoside hydrolase family protein (TAIR:AT5G18890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38149 : 210.0) no description available & (gnl|cdd|29575 : 202.0) no description available & (reliability: 2304.0) & (original description: Putative At5g18860, Description = AT5g18860/F17K4_110, PFAM = PF01156;PF01156)' T '23.2' 'nucleotide metabolism.degradation' 'nbv0.3scaffold1193_94882-97868' '(at2g19570 : 273.0) Encodes a cytidine deaminase that deaminates cytidine and deoxycytidine and is competitively inhibited by cytosine-containing compounds.; cytidine deaminase 1 (CDA1); CONTAINS InterPro DOMAIN/s: Cytidine deaminase, homodimeric (InterPro:IPR006263), APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193), Cytidine/deoxycytidylate deaminase, zinc-binding domain (InterPro:IPR013171); BEST Arabidopsis thaliana protein match is: Cytidine/deoxycytidylate deaminase family protein (TAIR:AT4G29610.1); Has 2638 Blast hits to 2526 proteins in 1057 species: Archae - 42; Bacteria - 2022; Metazoa - 110; Fungi - 58; Plants - 130; Viruses - 0; Other Eukaryotes - 276 (source: NCBI BLink). & (gnl|cdd|82775 : 197.0) no description available & (gnl|cdd|36051 : 120.0) no description available & (reliability: 546.0) & (original description: Putative CDA1, Description = Cytidine deaminase 1, PFAM = PF00383;PF08211)' T '23.2' 'nucleotide metabolism.degradation' 'nbv0.3scaffold66382_1-7935' '(at1g68720 : 325.0) Encodes the chloroplastic A-to-I tRNA editing enzyme.; tRNA arginine adenosine deaminase (TADA); FUNCTIONS IN: hydrolase activity, tRNA-specific adenosine deaminase activity, zinc ion binding; INVOLVED IN: tRNA wobble adenosine to inosine editing; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193); BEST Arabidopsis thaliana protein match is: Cytidine/deoxycytidylate deaminase family protein (TAIR:AT5G28050.1); Has 24755 Blast hits to 21172 proteins in 2784 species: Archae - 180; Bacteria - 9362; Metazoa - 5238; Fungi - 1033; Plants - 641; Viruses - 59; Other Eukaryotes - 8242 (source: NCBI BLink). & (gnl|cdd|29828 : 157.0) no description available & (gnl|cdd|36236 : 133.0) no description available & (reliability: 650.0) & (original description: Putative tadA, Description = tRNA-specific adenosine deaminase, PFAM = PF14437)' T '23.2' 'nucleotide metabolism.degradation' 'nbv0.3scaffold69801_4305-9413' '(at4g19180 : 740.0) GDA1/CD39 nucleoside phosphatase family protein; FUNCTIONS IN: hydrolase activity; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: GDA1/CD39 nucleoside phosphatase family protein (TAIR:AT2G02970.1); Has 1352 Blast hits to 1349 proteins in 221 species: Archae - 0; Bacteria - 34; Metazoa - 590; Fungi - 302; Plants - 310; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). & (gnl|cdd|36600 : 354.0) no description available & (gnl|cdd|85272 : 177.0) no description available & (p80595|apy_soltu : 85.9) Apyrase precursor (EC 3.6.1.5) (ATP-diphosphatase) (Adenosine diphosphatase) (ADPase) (ATP-diphosphohydrolase) - Solanum tuberosum (Potato) & (reliability: 1480.0) & (original description: Putative APY7, Description = Probable apyrase 7, PFAM = PF01150)' T '23.2' 'nucleotide metabolism.degradation' 'nbv0.5scaffold35_1305094-1315208' '(at2g38680 : 327.0) 5'-nucleotidases;magnesium ion binding; FUNCTIONS IN: magnesium ion binding, 5'-nucleotidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IE (InterPro:IPR006434); Has 332 Blast hits to 332 proteins in 84 species: Archae - 4; Bacteria - 0; Metazoa - 264; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|38338 : 197.0) no description available & (gnl|cdd|86957 : 174.0) no description available & (reliability: 654.0) & (original description: Putative NT5C3B, Description = 5'-nucleotidase, PFAM = PF05822)' T '23.2' 'nucleotide metabolism.degradation' 'nbv0.5scaffold80_793745-800698' '(at4g04880 : 461.0) adenosine/AMP deaminase family protein; FUNCTIONS IN: deaminase activity; INVOLVED IN: purine ribonucleoside monophosphate biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenosine/AMP deaminase (InterPro:IPR001365); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73206 : 219.0) no description available & (gnl|cdd|36313 : 213.0) no description available & (reliability: 922.0) & (original description: Putative At4g04880, Description = Adenosine deaminase-like protein, PFAM = PF00962;PF00962)' T '23.2' 'nucleotide metabolism.degradation' 'nbv0.5scaffold813_488979-502430' '(at4g34890 : 1823.0) Encodes a xanthine dehydrogenase, involved in purine catabolism. Ubiquitously expressed, but the transcript level is altered during aging, senescence, salt and cold stress, ABA treatment, and dark treatment. RNAi lines that suppress both XDH1 and XDH2 produce small plants with reduced fertility and accelerated leaf senescence. Role in drought tolerance.; xanthine dehydrogenase 1 (XDH1); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2, subdomain 1 (InterPro:IPR016167), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: xanthine dehydrogenase 2 (TAIR:AT4G34900.1); Has 21952 Blast hits to 20911 proteins in 1336 species: Archae - 451; Bacteria - 13165; Metazoa - 1072; Fungi - 101; Plants - 265; Viruses - 0; Other Eukaryotes - 6898 (source: NCBI BLink). & (gnl|cdd|35651 : 1428.0) no description available & (gnl|cdd|34250 : 708.0) no description available & (q6z351|aldol_orysa : 451.0) Putative aldehyde oxidase-like protein - Oryza sativa (Rice) & (reliability: 3646.0) & (original description: Putative XDH1, Description = Xanthine dehydrogenase 1, PFAM = PF00941;PF01799;PF03450;PF01315;PF02738;PF00111)' T '23.2' 'nucleotide metabolism.degradation' 'nbv0.5scaffold1542_382161-390779' '(at1g68720 : 364.0) Encodes the chloroplastic A-to-I tRNA editing enzyme.; tRNA arginine adenosine deaminase (TADA); FUNCTIONS IN: hydrolase activity, tRNA-specific adenosine deaminase activity, zinc ion binding; INVOLVED IN: tRNA wobble adenosine to inosine editing; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193); BEST Arabidopsis thaliana protein match is: Cytidine/deoxycytidylate deaminase family protein (TAIR:AT5G28050.1); Has 24755 Blast hits to 21172 proteins in 2784 species: Archae - 180; Bacteria - 9362; Metazoa - 5238; Fungi - 1033; Plants - 641; Viruses - 59; Other Eukaryotes - 8242 (source: NCBI BLink). & (gnl|cdd|30935 : 170.0) no description available & (gnl|cdd|36236 : 144.0) no description available & (reliability: 728.0) & (original description: Putative yfhC, Description = tRNA-specific adenosine deaminase, PFAM = PF14437)' T '23.2' 'nucleotide metabolism.degradation' 'nbv0.5scaffold1646_37232-43169' '(at5g54390 : 466.0) Encodes a 3'-phosphoadenosine-5'-phosphate (PAP) phosphatase that is sensitive to physiological concentrations of Na+. It does not also act as inositol polyphosphate 1-phosphatases, which other members of the HAL2-like family do. It is proposed that AHL acts in concert with sulphotransferases to prevent both the toxicity of PAP on RNA processing enzymes as well as the product inhibition of PAP on sulphate conjugation.; HAL2-like (HL); FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), 3(2),5 -bisphosphate nucleotidase HAL2 (InterPro:IPR006239), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G63980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36741 : 386.0) no description available & (q40639|dpnp_orysa : 236.0) 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) - Oryza sativa (Rice) & (gnl|cdd|73273 : 226.0) no description available & (reliability: 932.0) & (original description: Putative AHL, Description = PAP-specific phosphatase HAL2-like, PFAM = PF00459)' T '23.2' 'nucleotide metabolism.degradation' 'nbv0.5scaffold1736_188144-198426' '(gnl|cdd|36741 : 469.0) no description available & (at5g63980 : 458.0) Encodes a bifunctional protein that has 3'(2'),5'-bisphosphate nucleotidase and inositol polyphosphate 1-phosphatase activities and rescues sulfur assimilation mutants in yeast. It is involved in the response to cold, drought (negative regulator of drought tolerance), and ABA. Mutants in this gene exhibit enhanced induction of stress genes in response to cold, ABA, salt and dehydration due to higher accumulation of the second messenger, inositol (1,4,5)- triphosphate (IP(3)). Involved in degradation of small mRNAs. Mutants also affect the accumulation of miRNA target cleavage products. Regulates light-dependent repression of hypocotyl elongation and flowering time via its 3'(2'),5'-bisphosphate nucleotidase activity.; SAL1; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, nucleotide phosphatase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: in 15 processes; LOCATED IN: nucleus, chloroplast, chloroplast stroma, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase (InterPro:IPR000760), 3(2),5 -bisphosphate nucleotidase HAL2 (InterPro:IPR006239), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G64000.1); Has 8292 Blast hits to 8290 proteins in 1695 species: Archae - 42; Bacteria - 5356; Metazoa - 208; Fungi - 241; Plants - 302; Viruses - 0; Other Eukaryotes - 2143 (source: NCBI BLink). & (q40639|dpnp_orysa : 398.0) 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) - Oryza sativa (Rice) & (gnl|cdd|73273 : 278.0) no description available & (reliability: 916.0) & (original description: Putative tol1, Description = 3'(2'),5'-bisphosphate nucleotidase, PFAM = PF00459)' T '23.2' 'nucleotide metabolism.degradation' 'nbv0.5scaffold1996_274198-299880' '(at2g38280 : 1276.0) Encodes a protein with in vitro AMP deaminase activity that is involved in embryogenesis. Homozygous mutant embryos fail to develop past the zygote stage.; EMBRYONIC FACTOR1 (FAC1); FUNCTIONS IN: AMP deaminase activity; INVOLVED IN: purine ribonucleoside monophosphate biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: cytosol, nucleus, microsome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenosine/AMP deaminase (InterPro:IPR001365), Adenosine/AMP deaminase active site (InterPro:IPR006650), AMP deaminase (InterPro:IPR006329); Has 1191 Blast hits to 1128 proteins in 362 species: Archae - 0; Bacteria - 226; Metazoa - 390; Fungi - 271; Plants - 78; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (q84np7|ampd_orysa : 1136.0) Probable AMP deaminase (EC 3.5.4.6) - Oryza sativa (Rice) & (gnl|cdd|36312 : 866.0) no description available & (gnl|cdd|30062 : 858.0) no description available & (reliability: 2552.0) & (original description: Putative AMPD, Description = AMP deaminase, PFAM = PF00962)' T '23.2' 'nucleotide metabolism.degradation' 'nbv0.5scaffold3631_154456-164030' '(at4g05090 : 470.0) Inositol monophosphatase family protein; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G64000.1); Has 5084 Blast hits to 5082 proteins in 1369 species: Archae - 38; Bacteria - 2832; Metazoa - 92; Fungi - 221; Plants - 243; Viruses - 0; Other Eukaryotes - 1658 (source: NCBI BLink). & (gnl|cdd|36741 : 311.0) no description available & (gnl|cdd|73273 : 200.0) no description available & (q40639|dpnp_orysa : 131.0) 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) - Oryza sativa (Rice) & (reliability: 940.0) & (original description: Putative At4g05090, Description = Putative PAP-specific phosphatase, mitochondrial, PFAM = PF00459)' T '23.2' 'nucleotide metabolism.degradation' 'nbv0.5scaffold4175_37271-46975' '(at4g05090 : 400.0) Inositol monophosphatase family protein; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G64000.1); Has 5084 Blast hits to 5082 proteins in 1369 species: Archae - 38; Bacteria - 2832; Metazoa - 92; Fungi - 221; Plants - 243; Viruses - 0; Other Eukaryotes - 1658 (source: NCBI BLink). & (gnl|cdd|36741 : 287.0) no description available & (gnl|cdd|73273 : 195.0) no description available & (q40639|dpnp_orysa : 110.0) 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) - Oryza sativa (Rice) & (reliability: 800.0) & (original description: Putative At4g05090, Description = Putative PAP-specific phosphatase, mitochondrial, PFAM = PF00459)' T '23.2' 'nucleotide metabolism.degradation' 'nbv0.5scaffold4316_35792-39100' '(p80595|apy_soltu : 264.0) Apyrase precursor (EC 3.6.1.5) (ATP-diphosphatase) (Adenosine diphosphatase) (ADPase) (ATP-diphosphohydrolase) - Solanum tuberosum (Potato) & (gnl|cdd|85272 : 144.0) no description available & (at5g18280 : 141.0) Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY1 causes a complete inhibition of pollen germination.; apyrase 2 (APY2); CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: apyrase 1 (TAIR:AT3G04080.1); Has 1418 Blast hits to 1409 proteins in 220 species: Archae - 0; Bacteria - 33; Metazoa - 602; Fungi - 297; Plants - 360; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (gnl|cdd|36599 : 96.6) no description available & (reliability: 282.0) & (original description: Putative EEF45, Description = EEF45 protein, PFAM = PF01150)' T '23.2' 'nucleotide metabolism.degradation' 'niben044scf00005389ctg009_5887-12063' '(at5g54390 : 467.0) Encodes a 3'-phosphoadenosine-5'-phosphate (PAP) phosphatase that is sensitive to physiological concentrations of Na+. It does not also act as inositol polyphosphate 1-phosphatases, which other members of the HAL2-like family do. It is proposed that AHL acts in concert with sulphotransferases to prevent both the toxicity of PAP on RNA processing enzymes as well as the product inhibition of PAP on sulphate conjugation.; HAL2-like (HL); FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), 3(2),5 -bisphosphate nucleotidase HAL2 (InterPro:IPR006239), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G63980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36741 : 386.0) no description available & (q40639|dpnp_orysa : 236.0) 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) - Oryza sativa (Rice) & (gnl|cdd|73273 : 227.0) no description available & (reliability: 934.0) & (original description: Putative SAL1, Description = SAL1 phosphatase, PFAM = PF00459)' T '23.2' 'nucleotide metabolism.degradation' 'niben044scf00019004ctg005_6739-11377' '(at4g04880 : 436.0) adenosine/AMP deaminase family protein; FUNCTIONS IN: deaminase activity; INVOLVED IN: purine ribonucleoside monophosphate biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenosine/AMP deaminase (InterPro:IPR001365); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73206 : 214.0) no description available & (gnl|cdd|36313 : 195.0) no description available & (reliability: 872.0) & (original description: Putative adal, Description = Adenosine deaminase-like protein, PFAM = PF00962)' T '23.2' 'nucleotide metabolism.degradation' 'niben044scf00038884ctg000_760-6819' '(at5g18280 : 463.0) Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY1 causes a complete inhibition of pollen germination.; apyrase 2 (APY2); CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: apyrase 1 (TAIR:AT3G04080.1); Has 1418 Blast hits to 1409 proteins in 220 species: Archae - 0; Bacteria - 33; Metazoa - 602; Fungi - 297; Plants - 360; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (p52914|ntpa_pea : 374.0) Nucleoside-triphosphatase (EC 3.6.1.15) (Nucleoside triphosphate phosphohydrolase) (NTPase) (Apyrase) - Pisum sativum (Garden pea) & (gnl|cdd|36599 : 358.0) no description available & (gnl|cdd|85272 : 323.0) no description available & (reliability: 926.0) & (original description: Putative apy2, Description = Apyrase 2, PFAM = PF01150)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf00149_603961-625092' '(at2g38280 : 1277.0) Encodes a protein with in vitro AMP deaminase activity that is involved in embryogenesis. Homozygous mutant embryos fail to develop past the zygote stage.; EMBRYONIC FACTOR1 (FAC1); FUNCTIONS IN: AMP deaminase activity; INVOLVED IN: purine ribonucleoside monophosphate biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: cytosol, nucleus, microsome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenosine/AMP deaminase (InterPro:IPR001365), Adenosine/AMP deaminase active site (InterPro:IPR006650), AMP deaminase (InterPro:IPR006329); Has 1191 Blast hits to 1128 proteins in 362 species: Archae - 0; Bacteria - 226; Metazoa - 390; Fungi - 271; Plants - 78; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (q84np7|ampd_orysa : 1135.0) Probable AMP deaminase (EC 3.5.4.6) - Oryza sativa (Rice) & (gnl|cdd|36312 : 866.0) no description available & (gnl|cdd|30062 : 858.0) no description available & (reliability: 2554.0) & (original description: Putative AMPD, Description = AMP deaminase, PFAM = PF00962)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf00465_86124-94513' '(at1g68720 : 365.0) Encodes the chloroplastic A-to-I tRNA editing enzyme.; tRNA arginine adenosine deaminase (TADA); FUNCTIONS IN: hydrolase activity, tRNA-specific adenosine deaminase activity, zinc ion binding; INVOLVED IN: tRNA wobble adenosine to inosine editing; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193); BEST Arabidopsis thaliana protein match is: Cytidine/deoxycytidylate deaminase family protein (TAIR:AT5G28050.1); Has 24755 Blast hits to 21172 proteins in 2784 species: Archae - 180; Bacteria - 9362; Metazoa - 5238; Fungi - 1033; Plants - 641; Viruses - 59; Other Eukaryotes - 8242 (source: NCBI BLink). & (gnl|cdd|30935 : 173.0) no description available & (gnl|cdd|36236 : 147.0) no description available & (reliability: 730.0) & (original description: Putative yfhC, Description = tRNA-specific adenosine deaminase, PFAM = PF14437)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf00782_203472-215098' '(at2g38680 : 396.0) 5'-nucleotidases;magnesium ion binding; FUNCTIONS IN: magnesium ion binding, 5'-nucleotidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IE (InterPro:IPR006434); Has 332 Blast hits to 332 proteins in 84 species: Archae - 4; Bacteria - 0; Metazoa - 264; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|38338 : 236.0) no description available & (gnl|cdd|86957 : 196.0) no description available & (reliability: 792.0) & (original description: Putative Os03g0648900, Description = Os03g0648900 protein, PFAM = PF05822)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf00966_19394-27018' '(at2g02970 : 575.0) GDA1/CD39 nucleoside phosphatase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: GDA1/CD39 nucleoside phosphatase family protein (TAIR:AT1G14230.1); Has 1462 Blast hits to 1454 proteins in 233 species: Archae - 0; Bacteria - 37; Metazoa - 611; Fungi - 316; Plants - 335; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|36600 : 391.0) no description available & (gnl|cdd|85272 : 260.0) no description available & (p52914|ntpa_pea : 162.0) Nucleoside-triphosphatase (EC 3.6.1.15) (Nucleoside triphosphate phosphohydrolase) (NTPase) (Apyrase) - Pisum sativum (Garden pea) & (reliability: 1150.0) & (original description: Putative APY6, Description = Probable apyrase 6, PFAM = PF01150)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf01237_283395-288449' '(at4g19180 : 748.0) GDA1/CD39 nucleoside phosphatase family protein; FUNCTIONS IN: hydrolase activity; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: GDA1/CD39 nucleoside phosphatase family protein (TAIR:AT2G02970.1); Has 1352 Blast hits to 1349 proteins in 221 species: Archae - 0; Bacteria - 34; Metazoa - 590; Fungi - 302; Plants - 310; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). & (gnl|cdd|36600 : 353.0) no description available & (gnl|cdd|85272 : 173.0) no description available & (p80595|apy_soltu : 85.5) Apyrase precursor (EC 3.6.1.5) (ATP-diphosphatase) (Adenosine diphosphatase) (ADPase) (ATP-diphosphohydrolase) - Solanum tuberosum (Potato) & (reliability: 1496.0) & (original description: Putative APY7, Description = Probable apyrase 7, PFAM = PF01150)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf01529_68677-78251' '(at4g05090 : 482.0) Inositol monophosphatase family protein; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G64000.1); Has 5084 Blast hits to 5082 proteins in 1369 species: Archae - 38; Bacteria - 2832; Metazoa - 92; Fungi - 221; Plants - 243; Viruses - 0; Other Eukaryotes - 1658 (source: NCBI BLink). & (gnl|cdd|36741 : 322.0) no description available & (gnl|cdd|73273 : 211.0) no description available & (q40639|dpnp_orysa : 135.0) 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) - Oryza sativa (Rice) & (reliability: 964.0) & (original description: Putative At4g05090, Description = Putative PAP-specific phosphatase, mitochondrial, PFAM = PF00459)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf01657_159520-169067' '(gnl|cdd|36741 : 464.0) no description available & (at5g63980 : 453.0) Encodes a bifunctional protein that has 3'(2'),5'-bisphosphate nucleotidase and inositol polyphosphate 1-phosphatase activities and rescues sulfur assimilation mutants in yeast. It is involved in the response to cold, drought (negative regulator of drought tolerance), and ABA. Mutants in this gene exhibit enhanced induction of stress genes in response to cold, ABA, salt and dehydration due to higher accumulation of the second messenger, inositol (1,4,5)- triphosphate (IP(3)). Involved in degradation of small mRNAs. Mutants also affect the accumulation of miRNA target cleavage products. Regulates light-dependent repression of hypocotyl elongation and flowering time via its 3'(2'),5'-bisphosphate nucleotidase activity.; SAL1; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, nucleotide phosphatase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: in 15 processes; LOCATED IN: nucleus, chloroplast, chloroplast stroma, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase (InterPro:IPR000760), 3(2),5 -bisphosphate nucleotidase HAL2 (InterPro:IPR006239), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G64000.1); Has 8292 Blast hits to 8290 proteins in 1695 species: Archae - 42; Bacteria - 5356; Metazoa - 208; Fungi - 241; Plants - 302; Viruses - 0; Other Eukaryotes - 2143 (source: NCBI BLink). & (q40639|dpnp_orysa : 396.0) 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) - Oryza sativa (Rice) & (gnl|cdd|73273 : 273.0) no description available & (reliability: 906.0) & (original description: Putative SAL1, Description = SAL1 phosphatase, PFAM = PF00459)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf01826_232027-237537' '(at3g48540 : 348.0) Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193), Cytidine deaminase (InterPro:IPR015517); Has 3737 Blast hits to 3733 proteins in 1421 species: Archae - 65; Bacteria - 2323; Metazoa - 218; Fungi - 134; Plants - 52; Viruses - 89; Other Eukaryotes - 856 (source: NCBI BLink). & (gnl|cdd|38337 : 205.0) no description available & (gnl|cdd|29829 : 151.0) no description available & (reliability: 696.0) & (original description: Putative DCTD, Description = Deoxycytidylate deaminase, PFAM = PF00383)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf01975_199512-224161' '(p80595|apy_soltu : 265.0) Apyrase precursor (EC 3.6.1.5) (ATP-diphosphatase) (Adenosine diphosphatase) (ADPase) (ATP-diphosphohydrolase) - Solanum tuberosum (Potato) & (at5g18280 : 151.0) Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY1 causes a complete inhibition of pollen germination.; apyrase 2 (APY2); CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: apyrase 1 (TAIR:AT3G04080.1); Has 1418 Blast hits to 1409 proteins in 220 species: Archae - 0; Bacteria - 33; Metazoa - 602; Fungi - 297; Plants - 360; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (gnl|cdd|85272 : 142.0) no description available & (gnl|cdd|36599 : 92.7) no description available & (reliability: 302.0) & (original description: Putative EEF45, Description = EEF45 protein, PFAM = PF01150)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf02043_475191-507186' '(at2g38280 : 950.0) Encodes a protein with in vitro AMP deaminase activity that is involved in embryogenesis. Homozygous mutant embryos fail to develop past the zygote stage.; EMBRYONIC FACTOR1 (FAC1); FUNCTIONS IN: AMP deaminase activity; INVOLVED IN: purine ribonucleoside monophosphate biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: cytosol, nucleus, microsome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenosine/AMP deaminase (InterPro:IPR001365), Adenosine/AMP deaminase active site (InterPro:IPR006650), AMP deaminase (InterPro:IPR006329); Has 1191 Blast hits to 1128 proteins in 362 species: Archae - 0; Bacteria - 226; Metazoa - 390; Fungi - 271; Plants - 78; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (q84np7|ampd_orysa : 937.0) Probable AMP deaminase (EC 3.5.4.6) - Oryza sativa (Rice) & (gnl|cdd|30062 : 838.0) no description available & (gnl|cdd|36312 : 814.0) no description available & (reliability: 1900.0) & (original description: Putative AMPD, Description = AMP deaminase, PFAM = PF00962)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf02468_1070304-1078263' '(p04670|uric1_soybn : 462.0) Uricase-2 isozyme 1 (EC 1.7.3.3) (Uricase II isozyme 1) (Urate oxidase) (Nodulin 35) (N-35) (Nodule-specific uricase) - Glycine max (Soybean) & (at2g26230 : 457.0) uricase / urate oxidase / nodulin 35, putative; FUNCTIONS IN: urate oxidase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction, purine base metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uricase, conserved site (InterPro:IPR019842), Uricase (InterPro:IPR002042); Has 677 Blast hits to 673 proteins in 262 species: Archae - 5; Bacteria - 239; Metazoa - 140; Fungi - 185; Plants - 90; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|29760 : 381.0) no description available & (gnl|cdd|36812 : 327.0) no description available & (reliability: 914.0) & (original description: Putative PsUr, Description = Uricase, PFAM = PF01014;PF01014)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf03915_159098-176519' '(gnl|cdd|36741 : 477.0) no description available & (at5g63980 : 468.0) Encodes a bifunctional protein that has 3'(2'),5'-bisphosphate nucleotidase and inositol polyphosphate 1-phosphatase activities and rescues sulfur assimilation mutants in yeast. It is involved in the response to cold, drought (negative regulator of drought tolerance), and ABA. Mutants in this gene exhibit enhanced induction of stress genes in response to cold, ABA, salt and dehydration due to higher accumulation of the second messenger, inositol (1,4,5)- triphosphate (IP(3)). Involved in degradation of small mRNAs. Mutants also affect the accumulation of miRNA target cleavage products. Regulates light-dependent repression of hypocotyl elongation and flowering time via its 3'(2'),5'-bisphosphate nucleotidase activity.; SAL1; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, nucleotide phosphatase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: in 15 processes; LOCATED IN: nucleus, chloroplast, chloroplast stroma, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase (InterPro:IPR000760), 3(2),5 -bisphosphate nucleotidase HAL2 (InterPro:IPR006239), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G64000.1); Has 8292 Blast hits to 8290 proteins in 1695 species: Archae - 42; Bacteria - 5356; Metazoa - 208; Fungi - 241; Plants - 302; Viruses - 0; Other Eukaryotes - 2143 (source: NCBI BLink). & (q40639|dpnp_orysa : 405.0) 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) - Oryza sativa (Rice) & (gnl|cdd|73273 : 285.0) no description available & (reliability: 936.0) & (original description: Putative SAL1, Description = SAL1 phosphatase, PFAM = PF00459)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf04122_422523-431558' '(at4g05090 : 350.0) Inositol monophosphatase family protein; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G64000.1); Has 5084 Blast hits to 5082 proteins in 1369 species: Archae - 38; Bacteria - 2832; Metazoa - 92; Fungi - 221; Plants - 243; Viruses - 0; Other Eukaryotes - 1658 (source: NCBI BLink). & (gnl|cdd|36741 : 242.0) no description available & (gnl|cdd|73273 : 161.0) no description available & (q40639|dpnp_orysa : 89.0) 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) - Oryza sativa (Rice) & (reliability: 700.0) & (original description: Putative At4g05090, Description = Putative inositol monophosphatase family protein-like, PFAM = PF00459)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf04122_422585-430950' '(at4g05090 : 288.0) Inositol monophosphatase family protein; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G64000.1); Has 5084 Blast hits to 5082 proteins in 1369 species: Archae - 38; Bacteria - 2832; Metazoa - 92; Fungi - 221; Plants - 243; Viruses - 0; Other Eukaryotes - 1658 (source: NCBI BLink). & (gnl|cdd|36741 : 207.0) no description available & (gnl|cdd|73273 : 128.0) no description available & (reliability: 576.0) & (original description: Putative At4g05090, Description = Putative inositol monophosphatase family protein-like, PFAM = PF00459)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf04674_102885-111831' '(at5g18860 : 1195.0) inosine-uridine preferring nucleoside hydrolase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; CONTAINS InterPro DOMAIN/s: Inosine/uridine-preferring nucleoside hydrolase (InterPro:IPR001910); BEST Arabidopsis thaliana protein match is: Inosine-uridine preferring nucleoside hydrolase family protein (TAIR:AT5G18890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38149 : 214.0) no description available & (gnl|cdd|29575 : 213.0) no description available & (reliability: 2390.0) & (original description: Putative At5g18860, Description = AT5g18860/F17K4_110, PFAM = PF01156;PF01156)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf04674_108420-111059' '(at5g18860 : 158.0) inosine-uridine preferring nucleoside hydrolase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; CONTAINS InterPro DOMAIN/s: Inosine/uridine-preferring nucleoside hydrolase (InterPro:IPR001910); BEST Arabidopsis thaliana protein match is: Inosine-uridine preferring nucleoside hydrolase family protein (TAIR:AT5G18890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative At5g18860, Description = Inosine-uridine preferring nucleoside hydrolase, PFAM = )' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf04724_323934-342550' '(at5g54390 : 456.0) Encodes a 3'-phosphoadenosine-5'-phosphate (PAP) phosphatase that is sensitive to physiological concentrations of Na+. It does not also act as inositol polyphosphate 1-phosphatases, which other members of the HAL2-like family do. It is proposed that AHL acts in concert with sulphotransferases to prevent both the toxicity of PAP on RNA processing enzymes as well as the product inhibition of PAP on sulphate conjugation.; HAL2-like (HL); FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), 3(2),5 -bisphosphate nucleotidase HAL2 (InterPro:IPR006239), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G63980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36741 : 391.0) no description available & (gnl|cdd|73273 : 218.0) no description available & (q40639|dpnp_orysa : 210.0) 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) - Oryza sativa (Rice) & (reliability: 912.0) & (original description: Putative AHL, Description = PAP-specific phosphatase HAL2-like, PFAM = PF00459)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf05918_376483-388289' '(p80595|apy_soltu : 681.0) Apyrase precursor (EC 3.6.1.5) (ATP-diphosphatase) (Adenosine diphosphatase) (ADPase) (ATP-diphosphohydrolase) - Solanum tuberosum (Potato) & (gnl|cdd|85272 : 433.0) no description available & (at5g18280 : 347.0) Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY1 causes a complete inhibition of pollen germination.; apyrase 2 (APY2); CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: apyrase 1 (TAIR:AT3G04080.1); Has 1418 Blast hits to 1409 proteins in 220 species: Archae - 0; Bacteria - 33; Metazoa - 602; Fungi - 297; Plants - 360; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (gnl|cdd|36599 : 321.0) no description available & (reliability: 694.0) & (original description: Putative RROP1, Description = Apyrase, PFAM = PF01150)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf05918_376507-388155' '(p80595|apy_soltu : 511.0) Apyrase precursor (EC 3.6.1.5) (ATP-diphosphatase) (Adenosine diphosphatase) (ADPase) (ATP-diphosphohydrolase) - Solanum tuberosum (Potato) & (gnl|cdd|85272 : 380.0) no description available & (gnl|cdd|36599 : 281.0) no description available & (at5g18280 : 271.0) Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY1 causes a complete inhibition of pollen germination.; apyrase 2 (APY2); CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: apyrase 1 (TAIR:AT3G04080.1); Has 1418 Blast hits to 1409 proteins in 220 species: Archae - 0; Bacteria - 33; Metazoa - 602; Fungi - 297; Plants - 360; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 542.0) & (original description: Putative Apy2, Description = Apyrase 2, PFAM = PF01150)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf06084_149839-157075' '(at4g04880 : 480.0) adenosine/AMP deaminase family protein; FUNCTIONS IN: deaminase activity; INVOLVED IN: purine ribonucleoside monophosphate biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenosine/AMP deaminase (InterPro:IPR001365); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73206 : 234.0) no description available & (gnl|cdd|36313 : 227.0) no description available & (reliability: 960.0) & (original description: Putative adal, Description = Adenosine deaminase-like protein, PFAM = PF00962)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf06782_199810-207853' '(at4g34890 : 496.0) Encodes a xanthine dehydrogenase, involved in purine catabolism. Ubiquitously expressed, but the transcript level is altered during aging, senescence, salt and cold stress, ABA treatment, and dark treatment. RNAi lines that suppress both XDH1 and XDH2 produce small plants with reduced fertility and accelerated leaf senescence. Role in drought tolerance.; xanthine dehydrogenase 1 (XDH1); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2, subdomain 1 (InterPro:IPR016167), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: xanthine dehydrogenase 2 (TAIR:AT4G34900.1); Has 21952 Blast hits to 20911 proteins in 1336 species: Archae - 451; Bacteria - 13165; Metazoa - 1072; Fungi - 101; Plants - 265; Viruses - 0; Other Eukaryotes - 6898 (source: NCBI BLink). & (gnl|cdd|35651 : 395.0) no description available & (gnl|cdd|34250 : 303.0) no description available & (q852m2|aldo3_orysa : 157.0) Probable aldehyde oxidase 3 (EC 1.2.3.1) (AO-3) - Oryza sativa (Rice) & (reliability: 992.0) & (original description: Putative aox1, Description = Xanthine dehydrogenase, PFAM = PF02738)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf06806_443763-460387' '(at5g18280 : 563.0) Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY1 causes a complete inhibition of pollen germination.; apyrase 2 (APY2); CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: apyrase 1 (TAIR:AT3G04080.1); Has 1418 Blast hits to 1409 proteins in 220 species: Archae - 0; Bacteria - 33; Metazoa - 602; Fungi - 297; Plants - 360; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (gnl|cdd|36599 : 432.0) no description available & (p80595|apy_soltu : 407.0) Apyrase precursor (EC 3.6.1.5) (ATP-diphosphatase) (Adenosine diphosphatase) (ADPase) (ATP-diphosphohydrolase) - Solanum tuberosum (Potato) & (gnl|cdd|85272 : 365.0) no description available & (reliability: 1126.0) & (original description: Putative APY2, Description = Apyrase 2, PFAM = PF01150)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf06876_175843-183648' '(at5g28050 : 277.0) Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding, catalytic activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193); BEST Arabidopsis thaliana protein match is: Cytidine/deoxycytidylate deaminase family protein (TAIR:AT3G05300.1); Has 7983 Blast hits to 7983 proteins in 2406 species: Archae - 71; Bacteria - 5581; Metazoa - 106; Fungi - 179; Plants - 275; Viruses - 0; Other Eukaryotes - 1771 (source: NCBI BLink). & (gnl|cdd|36236 : 153.0) no description available & (gnl|cdd|29828 : 129.0) no description available & (reliability: 554.0) & (original description: Putative guaD, Description = Guanine deaminase, PFAM = PF00383)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf07742_219668-227397' '(at2g02970 : 534.0) GDA1/CD39 nucleoside phosphatase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: GDA1/CD39 nucleoside phosphatase family protein (TAIR:AT1G14230.1); Has 1462 Blast hits to 1454 proteins in 233 species: Archae - 0; Bacteria - 37; Metazoa - 611; Fungi - 316; Plants - 335; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|36600 : 378.0) no description available & (gnl|cdd|85272 : 256.0) no description available & (p52914|ntpa_pea : 155.0) Nucleoside-triphosphatase (EC 3.6.1.15) (Nucleoside triphosphate phosphohydrolase) (NTPase) (Apyrase) - Pisum sativum (Garden pea) & (reliability: 1068.0) & (original description: Putative APY6, Description = Probable apyrase 6, PFAM = PF01150)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf07951_380137-388148' '(at3g04080 : 479.0) Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY2 causes a complete inhibition of pollen germination.; apyrase 1 (APY1); CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: apyrase 2 (TAIR:AT5G18280.1); Has 1435 Blast hits to 1431 proteins in 229 species: Archae - 0; Bacteria - 35; Metazoa - 605; Fungi - 313; Plants - 348; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink). & (gnl|cdd|36599 : 368.0) no description available & (p52914|ntpa_pea : 360.0) Nucleoside-triphosphatase (EC 3.6.1.15) (Nucleoside triphosphate phosphohydrolase) (NTPase) (Apyrase) - Pisum sativum (Garden pea) & (gnl|cdd|85272 : 312.0) no description available & (reliability: 958.0) & (original description: Putative apy2, Description = Apyrase 2, PFAM = PF01150)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf08419_227193-243641' '(at4g04955 : 675.0) Encodes an allantoinase which is involved in allantoin degradation and assimilation. Gene expression was induced when allantoin was added to the medium. The insertion mutant, ataln m2-1, did not grow well on the MS medium where allantoin, instead of ammonium nitrate, was supplied.; allantoinase (ALN); CONTAINS InterPro DOMAIN/s: Amidohydrolase 1 (InterPro:IPR006680), Allantoinase (InterPro:IPR017593), Metal-dependent hydrolase, composite domain (InterPro:IPR011059); BEST Arabidopsis thaliana protein match is: pyrimidine 2 (TAIR:AT5G12200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30058 : 535.0) no description available & (gnl|cdd|37795 : 229.0) no description available & (reliability: 1350.0) & (original description: Putative ALN, Description = Allantoinase, PFAM = PF01979)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf09025_228546-233853' '(at3g48540 : 351.0) Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193), Cytidine deaminase (InterPro:IPR015517); Has 3737 Blast hits to 3733 proteins in 1421 species: Archae - 65; Bacteria - 2323; Metazoa - 218; Fungi - 134; Plants - 52; Viruses - 89; Other Eukaryotes - 856 (source: NCBI BLink). & (gnl|cdd|38337 : 197.0) no description available & (gnl|cdd|29829 : 147.0) no description available & (reliability: 702.0) & (original description: Putative dctd, Description = dCMP deaminase, PFAM = PF00383)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf09025_229995-233793' '(at3g48540 : 125.0) Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193), Cytidine deaminase (InterPro:IPR015517); Has 3737 Blast hits to 3733 proteins in 1421 species: Archae - 65; Bacteria - 2323; Metazoa - 218; Fungi - 134; Plants - 52; Viruses - 89; Other Eukaryotes - 856 (source: NCBI BLink). & (gnl|cdd|38337 : 88.2) no description available & (reliability: 250.0) & (original description: Putative dctd, Description = Deoxycytidylate deaminase, PFAM = PF00383)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf11383_46183-54641' '(at5g28050 : 280.0) Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding, catalytic activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193); BEST Arabidopsis thaliana protein match is: Cytidine/deoxycytidylate deaminase family protein (TAIR:AT3G05300.1); Has 7983 Blast hits to 7983 proteins in 2406 species: Archae - 71; Bacteria - 5581; Metazoa - 106; Fungi - 179; Plants - 275; Viruses - 0; Other Eukaryotes - 1771 (source: NCBI BLink). & (gnl|cdd|36236 : 152.0) no description available & (gnl|cdd|29828 : 127.0) no description available & (reliability: 560.0) & (original description: Putative cda, Description = Cytidine deaminase, PFAM = PF00383)' T '23.2' 'nucleotide metabolism.degradation' 'niben101scf15645_79082-92493' '(at4g19180 : 244.0) GDA1/CD39 nucleoside phosphatase family protein; FUNCTIONS IN: hydrolase activity; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: GDA1/CD39 nucleoside phosphatase family protein (TAIR:AT2G02970.1); Has 1352 Blast hits to 1349 proteins in 221 species: Archae - 0; Bacteria - 34; Metazoa - 590; Fungi - 302; Plants - 310; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). & (gnl|cdd|36600 : 216.0) no description available & (gnl|cdd|85272 : 171.0) no description available & (p80595|apy_soltu : 92.8) Apyrase precursor (EC 3.6.1.5) (ATP-diphosphatase) (Adenosine diphosphatase) (ADPase) (ATP-diphosphohydrolase) - Solanum tuberosum (Potato) & (reliability: 488.0) & (original description: Putative L484_014576, Description = Nucleoside-diphosphatase mig-23, PFAM = PF01150)' T '23.2.1' 'nucleotide metabolism.degradation.pyrimidine' '' '' '23.2.1.1' 'nucleotide metabolism.degradation.pyrimidine.5'-nucleotidase' '' '' '23.2.1.2' 'nucleotide metabolism.degradation.pyrimidine.uridine nucleosidase' 'niben044scf00005145ctg002_2083-19008' '(at1g05620 : 470.0) uridine-ribohydrolase 2 (URH2); FUNCTIONS IN: hydrolase activity, UDP-glucosyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Inosine/uridine-preferring nucleoside hydrolase (InterPro:IPR001910); BEST Arabidopsis thaliana protein match is: uridine-ribohydrolase 1 (TAIR:AT2G36310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29578 : 364.0) no description available & (gnl|cdd|38149 : 246.0) no description available & (reliability: 940.0) & (original description: Putative URH2, Description = Probable uridine nucleosidase 2, PFAM = PF01156)' T '23.2.1.2' 'nucleotide metabolism.degradation.pyrimidine.uridine nucleosidase' 'niben044scf00006538ctg000_1773-5970' '(at2g36310 : 508.0) uridine-ribohydrolase 1 (URH1); CONTAINS InterPro DOMAIN/s: Inosine/uridine-preferring nucleoside hydrolase (InterPro:IPR001910); BEST Arabidopsis thaliana protein match is: uridine-ribohydrolase 2 (TAIR:AT1G05620.1); Has 6361 Blast hits to 6297 proteins in 1364 species: Archae - 75; Bacteria - 4675; Metazoa - 179; Fungi - 233; Plants - 187; Viruses - 0; Other Eukaryotes - 1012 (source: NCBI BLink). & (gnl|cdd|29578 : 384.0) no description available & (gnl|cdd|38149 : 230.0) no description available & (reliability: 1016.0) & (original description: Putative rihB, Description = Inosine/uridine-preferring nucleoside hydrolase, PFAM = PF01156)' T '23.2.1.2' 'nucleotide metabolism.degradation.pyrimidine.uridine nucleosidase' 'niben101scf00375_135659-142733' '(at2g36310 : 533.0) uridine-ribohydrolase 1 (URH1); CONTAINS InterPro DOMAIN/s: Inosine/uridine-preferring nucleoside hydrolase (InterPro:IPR001910); BEST Arabidopsis thaliana protein match is: uridine-ribohydrolase 2 (TAIR:AT1G05620.1); Has 6361 Blast hits to 6297 proteins in 1364 species: Archae - 75; Bacteria - 4675; Metazoa - 179; Fungi - 233; Plants - 187; Viruses - 0; Other Eukaryotes - 1012 (source: NCBI BLink). & (gnl|cdd|29578 : 416.0) no description available & (gnl|cdd|38149 : 257.0) no description available & (reliability: 1066.0) & (original description: Putative URH1, Description = Uridine nucleosidase 1, PFAM = PF01156)' T '23.2.1.2' 'nucleotide metabolism.degradation.pyrimidine.uridine nucleosidase' 'niben101scf05183_24824-47041' '(at1g05620 : 468.0) uridine-ribohydrolase 2 (URH2); FUNCTIONS IN: hydrolase activity, UDP-glucosyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Inosine/uridine-preferring nucleoside hydrolase (InterPro:IPR001910); BEST Arabidopsis thaliana protein match is: uridine-ribohydrolase 1 (TAIR:AT2G36310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29578 : 362.0) no description available & (gnl|cdd|38149 : 244.0) no description available & (reliability: 936.0) & (original description: Putative URH2, Description = Probable uridine nucleosidase 2, PFAM = PF01156)' T '23.2.1.3' 'nucleotide metabolism.degradation.pyrimidine.dihydrouracil dehydrogenase' 'niben101scf01182_4135-19659' '(at3g17810 : 686.0) Encodes a protein predicted to have dihydropyrimidine dehydrogenase activity. Its activity has not been demonstrated in vivo, but, it is required for efficient uracil catabolism in Arabidopsis. It localizes to the plastid.; pyrimidine 1 (PYD1); FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, dihydropyrimidine dehydrogenase (NADP+) activity; INVOLVED IN: 'de novo' pyrimidine base biosynthetic process, uracil catabolic process, cellular response to nitrogen levels; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Dihydroorotate dehydrogenase, class 1/ 2 (InterPro:IPR012135), Dihydroorotate dehydrogenase, class 1, core (InterPro:IPR005720); Has 5953 Blast hits to 5953 proteins in 1914 species: Archae - 176; Bacteria - 4342; Metazoa - 263; Fungi - 99; Plants - 89; Viruses - 0; Other Eukaryotes - 984 (source: NCBI BLink). & (gnl|cdd|37010 : 540.0) no description available & (gnl|cdd|73382 : 452.0) no description available & (reliability: 1372.0) & (original description: Putative PYD1, Description = Dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic, PFAM = PF01180)' T '23.2.1.3' 'nucleotide metabolism.degradation.pyrimidine.dihydrouracil dehydrogenase' 'niben101scf01249_550408-556704' '(at3g17810 : 682.0) Encodes a protein predicted to have dihydropyrimidine dehydrogenase activity. Its activity has not been demonstrated in vivo, but, it is required for efficient uracil catabolism in Arabidopsis. It localizes to the plastid.; pyrimidine 1 (PYD1); FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, dihydropyrimidine dehydrogenase (NADP+) activity; INVOLVED IN: 'de novo' pyrimidine base biosynthetic process, uracil catabolic process, cellular response to nitrogen levels; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Dihydroorotate dehydrogenase, class 1/ 2 (InterPro:IPR012135), Dihydroorotate dehydrogenase, class 1, core (InterPro:IPR005720); Has 5953 Blast hits to 5953 proteins in 1914 species: Archae - 176; Bacteria - 4342; Metazoa - 263; Fungi - 99; Plants - 89; Viruses - 0; Other Eukaryotes - 984 (source: NCBI BLink). & (gnl|cdd|37010 : 536.0) no description available & (gnl|cdd|73382 : 453.0) no description available & (reliability: 1364.0) & (original description: Putative preA, Description = PreA protein, PFAM = PF01180)' T '23.2.1.4' 'nucleotide metabolism.degradation.pyrimidine.dihydropyrimidinase' 'nbv0.5scaffold462_359117-375396' '(at5g12200 : 852.0) Encodes a protein with dihydropyrimidine amidohydrolase activity. It localizes to the secretory system and plays a role in uracil metabolism.; pyrimidine 2 (PYD2); CONTAINS InterPro DOMAIN/s: D-hydantoinase (InterPro:IPR011778), Amidohydrolase 1 (InterPro:IPR006680), Metal-dependent hydrolase, composite domain (InterPro:IPR011059); BEST Arabidopsis thaliana protein match is: allantoinase (TAIR:AT4G04955.1); Has 11476 Blast hits to 11454 proteins in 2253 species: Archae - 299; Bacteria - 6727; Metazoa - 670; Fungi - 189; Plants - 91; Viruses - 0; Other Eukaryotes - 3500 (source: NCBI BLink). & (gnl|cdd|37795 : 664.0) no description available & (gnl|cdd|30057 : 631.0) no description available & (reliability: 1704.0) & (original description: Putative PYD2, Description = Dihydropyrimidinase, PFAM = PF01979)' T '23.2.1.4' 'nucleotide metabolism.degradation.pyrimidine.dihydropyrimidinase' 'niben101scf05201_583062-592588' '(at5g12200 : 858.0) Encodes a protein with dihydropyrimidine amidohydrolase activity. It localizes to the secretory system and plays a role in uracil metabolism.; pyrimidine 2 (PYD2); CONTAINS InterPro DOMAIN/s: D-hydantoinase (InterPro:IPR011778), Amidohydrolase 1 (InterPro:IPR006680), Metal-dependent hydrolase, composite domain (InterPro:IPR011059); BEST Arabidopsis thaliana protein match is: allantoinase (TAIR:AT4G04955.1); Has 11476 Blast hits to 11454 proteins in 2253 species: Archae - 299; Bacteria - 6727; Metazoa - 670; Fungi - 189; Plants - 91; Viruses - 0; Other Eukaryotes - 3500 (source: NCBI BLink). & (gnl|cdd|37795 : 658.0) no description available & (gnl|cdd|30057 : 628.0) no description available & (reliability: 1716.0) & (original description: Putative PYD2, Description = Dihydropyrimidinase, PFAM = PF01979)' T '23.2.1.4' 'nucleotide metabolism.degradation.pyrimidine.dihydropyrimidinase' 'niben101scf09860_38972-57308' '(at5g12200 : 814.0) Encodes a protein with dihydropyrimidine amidohydrolase activity. It localizes to the secretory system and plays a role in uracil metabolism.; pyrimidine 2 (PYD2); CONTAINS InterPro DOMAIN/s: D-hydantoinase (InterPro:IPR011778), Amidohydrolase 1 (InterPro:IPR006680), Metal-dependent hydrolase, composite domain (InterPro:IPR011059); BEST Arabidopsis thaliana protein match is: allantoinase (TAIR:AT4G04955.1); Has 11476 Blast hits to 11454 proteins in 2253 species: Archae - 299; Bacteria - 6727; Metazoa - 670; Fungi - 189; Plants - 91; Viruses - 0; Other Eukaryotes - 3500 (source: NCBI BLink). & (gnl|cdd|37795 : 638.0) no description available & (gnl|cdd|30057 : 605.0) no description available & (reliability: 1628.0) & (original description: Putative PYD2, Description = Dihydropyrimidinase, PFAM = PF01979)' T '23.2.1.5' 'nucleotide metabolism.degradation.pyrimidine.beta-ureidopropionase' 'niben101scf02044_422404-428134' '(at5g64370 : 714.0) PYD3 encodes a beta-ureidopropionase which, when expressed in E. coli, has been shown to convert beta-ureidopropionate into beta-alanine. It localizes to the cytosol and plays an important role in uracil degradation.; beta-ureidopropionase (BETA-UP); FUNCTIONS IN: beta-ureidopropionase activity; INVOLVED IN: nitrogen compound metabolic process, uracil catabolic process, cellular response to nitrogen levels; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010); BEST Arabidopsis thaliana protein match is: nitrilase-like protein 1 (TAIR:AT2G27450.2); Has 6588 Blast hits to 6556 proteins in 1697 species: Archae - 146; Bacteria - 4263; Metazoa - 430; Fungi - 262; Plants - 305; Viruses - 11; Other Eukaryotes - 1171 (source: NCBI BLink). & (gnl|cdd|36026 : 659.0) no description available & (gnl|cdd|85033 : 150.0) no description available & (q3hvn1|agub_soltu : 87.4) N-carbamoylputrescine amidase (EC 3.5.1.53) - Solanum tuberosum (Potato) & (reliability: 1428.0) & (original description: Putative PYD3, Description = Beta-ureidopropionase, PFAM = PF00795)' T '23.2.1.5' 'nucleotide metabolism.degradation.pyrimidine.beta-ureidopropionase' 'niben101scf02323_111841-119305' '(at5g64370 : 721.0) PYD3 encodes a beta-ureidopropionase which, when expressed in E. coli, has been shown to convert beta-ureidopropionate into beta-alanine. It localizes to the cytosol and plays an important role in uracil degradation.; beta-ureidopropionase (BETA-UP); FUNCTIONS IN: beta-ureidopropionase activity; INVOLVED IN: nitrogen compound metabolic process, uracil catabolic process, cellular response to nitrogen levels; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010); BEST Arabidopsis thaliana protein match is: nitrilase-like protein 1 (TAIR:AT2G27450.2); Has 6588 Blast hits to 6556 proteins in 1697 species: Archae - 146; Bacteria - 4263; Metazoa - 430; Fungi - 262; Plants - 305; Viruses - 11; Other Eukaryotes - 1171 (source: NCBI BLink). & (gnl|cdd|36026 : 661.0) no description available & (gnl|cdd|85033 : 153.0) no description available & (q3hvn1|agub_soltu : 90.5) N-carbamoylputrescine amidase (EC 3.5.1.53) - Solanum tuberosum (Potato) & (reliability: 1442.0) & (original description: Putative PYD3, Description = Beta-ureidopropionase, PFAM = PF00795)' T '23.2.1.6' 'nucleotide metabolism.degradation.pyrimidine.cytidine deaminase' '' '' '23.2.2' 'nucleotide metabolism.degradation.purine' 'nbv0.5scaffold3757_122405-133137' '(at2g03530 : 504.0) Mediate high-affinity uracil and 5-FU (a toxic uracil analogue) transport when expressed in yeast and Xenopus oocytes.Involved in allantoin transport.; ureide permease 2 (UPS2); FUNCTIONS IN: uracil:cation symporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: ureide permease 1 (TAIR:AT2G03590.1); Has 297 Blast hits to 263 proteins in 72 species: Archae - 0; Bacteria - 145; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|70624 : 501.0) no description available & (q41706|upsa3_vigun : 457.0) Probable ureide permease A3 (VuA3) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 1000.0) & (original description: Putative UPS2, Description = Ureide permease 2, PFAM = PF07168)' T '23.2.2' 'nucleotide metabolism.degradation.purine' 'niben044scf00004630ctg004_1567-4290' '(at2g03530 : 229.0) Mediate high-affinity uracil and 5-FU (a toxic uracil analogue) transport when expressed in yeast and Xenopus oocytes.Involved in allantoin transport.; ureide permease 2 (UPS2); FUNCTIONS IN: uracil:cation symporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: ureide permease 1 (TAIR:AT2G03590.1); Has 297 Blast hits to 263 proteins in 72 species: Archae - 0; Bacteria - 145; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|70624 : 198.0) no description available & (q41706|upsa3_vigun : 176.0) Probable ureide permease A3 (VuA3) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 456.0) & (original description: Putative A3, Description = Putative ureide permease A3, PFAM = PF07168)' T '23.2.2' 'nucleotide metabolism.degradation.purine' 'niben101scf03971_243170-248641' '(at2g03530 : 536.0) Mediate high-affinity uracil and 5-FU (a toxic uracil analogue) transport when expressed in yeast and Xenopus oocytes.Involved in allantoin transport.; ureide permease 2 (UPS2); FUNCTIONS IN: uracil:cation symporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: ureide permease 1 (TAIR:AT2G03590.1); Has 297 Blast hits to 263 proteins in 72 species: Archae - 0; Bacteria - 145; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|70624 : 513.0) no description available & (q41706|upsa3_vigun : 487.0) Probable ureide permease A3 (VuA3) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 1052.0) & (original description: Putative UPS2, Description = Ureide permease 2, PFAM = PF07168)' T '23.2.2' 'nucleotide metabolism.degradation.purine' 'niben101scf05416_38229-45915' '(at2g03530 : 545.0) Mediate high-affinity uracil and 5-FU (a toxic uracil analogue) transport when expressed in yeast and Xenopus oocytes.Involved in allantoin transport.; ureide permease 2 (UPS2); FUNCTIONS IN: uracil:cation symporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: ureide permease 1 (TAIR:AT2G03590.1); Has 297 Blast hits to 263 proteins in 72 species: Archae - 0; Bacteria - 145; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|70624 : 520.0) no description available & (q41706|upsa3_vigun : 471.0) Probable ureide permease A3 (VuA3) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 1074.0) & (original description: Putative UPS2, Description = Ureide permease 2, PFAM = PF07168)' T '23.2.2.1' 'nucleotide metabolism.degradation.purine.AMP deaminase' '' '' '23.2.2.8' 'nucleotide metabolism.degradation.purine.guanosine deaminase' '' '' '23.2.2.9' 'nucleotide metabolism.degradation.purine.guanosine nucleosidase' '' '' '23.2.2.10' 'nucleotide metabolism.degradation.purine.guanine deaminase' '' '' '23.2.2.11' 'nucleotide metabolism.degradation.purine.xanthine dehydrogenase' '' '' '23.2.2.1001' 'nucleotide metabolism.degradation.purine' 'uracil' 'Co-factor metabolism; nucleotide metabolism.degradation' M '23.2.2.1002' 'nucleotide metabolism.degradation.purine' 'beta-alanine' 'Co-factor metabolism; nucleotide metabolism.degradation; aspartate degradation' M '23.2.2.1003' 'nucleotide metabolism.degradation.purine' 'xanthosine' 'Co-factor metabolism; nucleotide metabolism.degradation; purine metabolism' M '23.2.2.1004' 'nucleotide metabolism.degradation.purine' 'xanthine' 'Co-factor metabolism; nucleotide metabolism.degradation; purine metabolism' M '23.2.2.1005' 'nucleotide metabolism.degradation.purine' 'hypoxanthine' 'Co-factor metabolism; nucleotide metabolism.degradation; purine metabolism' M '23.2.2.1006' 'nucleotide metabolism.degradation.purine' 'urate' 'Co-factor metabolism; nucleotide metabolism.degradation; purine metabolism' M '23.2.2.1007' 'nucleotide metabolism.degradation.purine' 'allantoin' 'Co-factor metabolism; nucleotide metabolism.degradation; purine metabolism' M '23.3' 'nucleotide metabolism.salvage' 'nbv0.3scaffold31608_16359-22788' '(at1g72040 : 618.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Deoxynucleoside kinase (InterPro:IPR002624); Has 2859 Blast hits to 2855 proteins in 704 species: Archae - 0; Bacteria - 1629; Metazoa - 493; Fungi - 0; Plants - 69; Viruses - 71; Other Eukaryotes - 597 (source: NCBI BLink). & (gnl|cdd|39436 : 290.0) no description available & (gnl|cdd|30191 : 184.0) no description available & (reliability: 1236.0) & (original description: Putative DGK, Description = Putative deoxyguanosine kinase like, PFAM = PF01712)' T '23.3' 'nucleotide metabolism.salvage' 'nbv0.5scaffold3757_122405-133137' '(at2g03530 : 504.0) Mediate high-affinity uracil and 5-FU (a toxic uracil analogue) transport when expressed in yeast and Xenopus oocytes.Involved in allantoin transport.; ureide permease 2 (UPS2); FUNCTIONS IN: uracil:cation symporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: ureide permease 1 (TAIR:AT2G03590.1); Has 297 Blast hits to 263 proteins in 72 species: Archae - 0; Bacteria - 145; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|70624 : 501.0) no description available & (q41706|upsa3_vigun : 457.0) Probable ureide permease A3 (VuA3) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 1000.0) & (original description: Putative UPS2, Description = Ureide permease 2, PFAM = PF07168)' T '23.3' 'nucleotide metabolism.salvage' 'nbv0.5scaffold7288_31311-47774' '(at1g75210 : 814.0) HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase; FUNCTIONS IN: 5'-nucleotidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase (InterPro:IPR008380), Purine 5'-nucleotidase (InterPro:IPR016695); BEST Arabidopsis thaliana protein match is: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase (TAIR:AT5G48960.1); Has 679 Blast hits to 675 proteins in 116 species: Archae - 0; Bacteria - 48; Metazoa - 445; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|37680 : 418.0) no description available & (gnl|cdd|86943 : 395.0) no description available & (reliability: 1628.0) & (original description: Putative NTD1, Description = Putative uncharacterized protein NTD1, PFAM = PF05761)' T '23.3' 'nucleotide metabolism.salvage' 'niben044scf00004630ctg004_1567-4290' '(at2g03530 : 229.0) Mediate high-affinity uracil and 5-FU (a toxic uracil analogue) transport when expressed in yeast and Xenopus oocytes.Involved in allantoin transport.; ureide permease 2 (UPS2); FUNCTIONS IN: uracil:cation symporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: ureide permease 1 (TAIR:AT2G03590.1); Has 297 Blast hits to 263 proteins in 72 species: Archae - 0; Bacteria - 145; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|70624 : 198.0) no description available & (q41706|upsa3_vigun : 176.0) Probable ureide permease A3 (VuA3) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 456.0) & (original description: Putative A3, Description = Putative ureide permease A3, PFAM = PF07168)' T '23.3' 'nucleotide metabolism.salvage' 'niben044scf00035710ctg001_1341-6152' '(at1g72040 : 581.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Deoxynucleoside kinase (InterPro:IPR002624); Has 2859 Blast hits to 2855 proteins in 704 species: Archae - 0; Bacteria - 1629; Metazoa - 493; Fungi - 0; Plants - 69; Viruses - 71; Other Eukaryotes - 597 (source: NCBI BLink). & (gnl|cdd|39436 : 278.0) no description available & (gnl|cdd|30191 : 183.0) no description available & (reliability: 1162.0) & (original description: Putative DGK, Description = Putative deoxyguanosine kinase like, PFAM = PF01712)' T '23.3' 'nucleotide metabolism.salvage' 'niben101scf02444_122135-128851' '(at1g72040 : 625.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Deoxynucleoside kinase (InterPro:IPR002624); Has 2859 Blast hits to 2855 proteins in 704 species: Archae - 0; Bacteria - 1629; Metazoa - 493; Fungi - 0; Plants - 69; Viruses - 71; Other Eukaryotes - 597 (source: NCBI BLink). & (gnl|cdd|39436 : 291.0) no description available & (gnl|cdd|30191 : 183.0) no description available & (reliability: 1250.0) & (original description: Putative DGK, Description = Putative deoxyguanosine kinase like, PFAM = PF01712)' T '23.3' 'nucleotide metabolism.salvage' 'niben101scf03971_243170-248641' '(at2g03530 : 536.0) Mediate high-affinity uracil and 5-FU (a toxic uracil analogue) transport when expressed in yeast and Xenopus oocytes.Involved in allantoin transport.; ureide permease 2 (UPS2); FUNCTIONS IN: uracil:cation symporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: ureide permease 1 (TAIR:AT2G03590.1); Has 297 Blast hits to 263 proteins in 72 species: Archae - 0; Bacteria - 145; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|70624 : 513.0) no description available & (q41706|upsa3_vigun : 487.0) Probable ureide permease A3 (VuA3) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 1052.0) & (original description: Putative UPS2, Description = Ureide permease 2, PFAM = PF07168)' T '23.3' 'nucleotide metabolism.salvage' 'niben101scf04113_1098507-1111376' '(at1g75210 : 839.0) HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase; FUNCTIONS IN: 5'-nucleotidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase (InterPro:IPR008380), Purine 5'-nucleotidase (InterPro:IPR016695); BEST Arabidopsis thaliana protein match is: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase (TAIR:AT5G48960.1); Has 679 Blast hits to 675 proteins in 116 species: Archae - 0; Bacteria - 48; Metazoa - 445; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|37680 : 431.0) no description available & (gnl|cdd|86943 : 402.0) no description available & (reliability: 1678.0) & (original description: Putative NTD1, Description = Putative uncharacterized protein NTD1, PFAM = PF05761)' T '23.3' 'nucleotide metabolism.salvage' 'niben101scf05416_38229-45915' '(at2g03530 : 545.0) Mediate high-affinity uracil and 5-FU (a toxic uracil analogue) transport when expressed in yeast and Xenopus oocytes.Involved in allantoin transport.; ureide permease 2 (UPS2); FUNCTIONS IN: uracil:cation symporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: ureide permease 1 (TAIR:AT2G03590.1); Has 297 Blast hits to 263 proteins in 72 species: Archae - 0; Bacteria - 145; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|70624 : 520.0) no description available & (q41706|upsa3_vigun : 471.0) Probable ureide permease A3 (VuA3) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 1074.0) & (original description: Putative UPS2, Description = Ureide permease 2, PFAM = PF07168)' T '23.3.1' 'nucleotide metabolism.salvage.phosphoribosyltransferases' 'nbv0.3scaffold51179_255-11453' '(at2g23420 : 952.0) nicotinate phosphoribosyltransferase 2 (NAPRT2); FUNCTIONS IN: nicotinate phosphoribosyltransferase activity; INVOLVED IN: pyridine nucleotide biosynthetic process, nicotinate nucleotide salvage; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicotinate phosphoribosyltransferase-related (InterPro:IPR007229), Nicotinate phosphoribosyltransferase putative (InterPro:IPR006405), Nicotinate phosphoribosyltransferase-like (InterPro:IPR015977); BEST Arabidopsis thaliana protein match is: nicotinate phosphoribosyltransferase 1 (TAIR:AT4G36940.1); Has 2998 Blast hits to 2961 proteins in 1361 species: Archae - 146; Bacteria - 2405; Metazoa - 184; Fungi - 41; Plants - 69; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink). & (gnl|cdd|37722 : 561.0) no description available & (gnl|cdd|29617 : 467.0) no description available & (reliability: 1904.0) & (original description: Putative NAPRT2, Description = Nicotinate phosphoribosyltransferase 2, PFAM = )' T '23.3.1' 'nucleotide metabolism.salvage.phosphoribosyltransferases' 'nbv0.5scaffold1429_325463-336800' '(at2g23420 : 966.0) nicotinate phosphoribosyltransferase 2 (NAPRT2); FUNCTIONS IN: nicotinate phosphoribosyltransferase activity; INVOLVED IN: pyridine nucleotide biosynthetic process, nicotinate nucleotide salvage; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicotinate phosphoribosyltransferase-related (InterPro:IPR007229), Nicotinate phosphoribosyltransferase putative (InterPro:IPR006405), Nicotinate phosphoribosyltransferase-like (InterPro:IPR015977); BEST Arabidopsis thaliana protein match is: nicotinate phosphoribosyltransferase 1 (TAIR:AT4G36940.1); Has 2998 Blast hits to 2961 proteins in 1361 species: Archae - 146; Bacteria - 2405; Metazoa - 184; Fungi - 41; Plants - 69; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink). & (gnl|cdd|37722 : 566.0) no description available & (gnl|cdd|29617 : 477.0) no description available & (reliability: 1932.0) & (original description: Putative NAPRT2, Description = Nicotinate phosphoribosyltransferase 2, PFAM = )' T '23.3.1' 'nucleotide metabolism.salvage.phosphoribosyltransferases' 'niben101scf01802_215615-234033' '(at2g23420 : 964.0) nicotinate phosphoribosyltransferase 2 (NAPRT2); FUNCTIONS IN: nicotinate phosphoribosyltransferase activity; INVOLVED IN: pyridine nucleotide biosynthetic process, nicotinate nucleotide salvage; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicotinate phosphoribosyltransferase-related (InterPro:IPR007229), Nicotinate phosphoribosyltransferase putative (InterPro:IPR006405), Nicotinate phosphoribosyltransferase-like (InterPro:IPR015977); BEST Arabidopsis thaliana protein match is: nicotinate phosphoribosyltransferase 1 (TAIR:AT4G36940.1); Has 2998 Blast hits to 2961 proteins in 1361 species: Archae - 146; Bacteria - 2405; Metazoa - 184; Fungi - 41; Plants - 69; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink). & (gnl|cdd|37722 : 562.0) no description available & (gnl|cdd|29617 : 477.0) no description available & (reliability: 1928.0) & (original description: Putative NAPRT2, Description = Nicotinate phosphoribosyltransferase 2, PFAM = )' T '23.3.1.1' 'nucleotide metabolism.salvage.phosphoribosyltransferases.aprt' 'nbv0.3scaffold64292_119-5342' '(at5g11160 : 279.0) adenine phosphoribosyltransferase 5 (APT5); FUNCTIONS IN: adenine phosphoribosyltransferase activity; INVOLVED IN: nucleoside metabolic process, adenine salvage, anaerobic respiration, nucleotide metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenine phosphoribosyl transferase (InterPro:IPR005764), Phosphoribosyltransferase (InterPro:IPR000836); BEST Arabidopsis thaliana protein match is: adenine phosphoribosyl transferase 2 (TAIR:AT1G80050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36924 : 248.0) no description available & (q43199|apt1_wheat : 230.0) Adenine phosphoribosyltransferase 1 (EC 2.4.2.7) (APRT 1) - Triticum aestivum (Wheat) & (gnl|cdd|80977 : 213.0) no description available & (reliability: 558.0) & (original description: Putative aprt, Description = Adenine phosphoribosyl transferase, PFAM = PF00156)' T '23.3.1.1' 'nucleotide metabolism.salvage.phosphoribosyltransferases.aprt' 'nbv0.5scaffold7321_26544-31767' '(at5g11160 : 295.0) adenine phosphoribosyltransferase 5 (APT5); FUNCTIONS IN: adenine phosphoribosyltransferase activity; INVOLVED IN: nucleoside metabolic process, adenine salvage, anaerobic respiration, nucleotide metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenine phosphoribosyl transferase (InterPro:IPR005764), Phosphoribosyltransferase (InterPro:IPR000836); BEST Arabidopsis thaliana protein match is: adenine phosphoribosyl transferase 2 (TAIR:AT1G80050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36924 : 255.0) no description available & (q43199|apt1_wheat : 230.0) Adenine phosphoribosyltransferase 1 (EC 2.4.2.7) (APRT 1) - Triticum aestivum (Wheat) & (gnl|cdd|80977 : 209.0) no description available & (reliability: 590.0) & (original description: Putative APT5, Description = Adenine phosphoribosyltransferase 5, PFAM = PF00156)' T '23.3.1.1' 'nucleotide metabolism.salvage.phosphoribosyltransferases.aprt' 'niben101scf01646_14452-22664' '(at4g22570 : 282.0) Encodes an adenine phosphoribosyltransferase (APT; EC 2.4.2.7), which is a constitutively expressed enzyme involved in the one-step salvage of adenine to AMP. APT3 has higher affinity for zeatin, isopentenyladenine and benzyladenine than APT1 but lower Vmax than APT1.; adenine phosphoribosyl transferase 3 (APT3); CONTAINS InterPro DOMAIN/s: Adenine phosphoribosyl transferase (InterPro:IPR005764), Phosphoribosyltransferase (InterPro:IPR000836); BEST Arabidopsis thaliana protein match is: adenine phosphoribosyl transferase 4 (TAIR:AT4G12440.2); Has 8946 Blast hits to 8945 proteins in 2488 species: Archae - 280; Bacteria - 6058; Metazoa - 171; Fungi - 181; Plants - 166; Viruses - 0; Other Eukaryotes - 2090 (source: NCBI BLink). & (gnl|cdd|36924 : 269.0) no description available & (q43199|apt1_wheat : 251.0) Adenine phosphoribosyltransferase 1 (EC 2.4.2.7) (APRT 1) - Triticum aestivum (Wheat) & (gnl|cdd|80977 : 226.0) no description available & (reliability: 564.0) & (original description: Putative APT3, Description = Adenine phosphoribosyltransferase 3, PFAM = PF00156)' T '23.3.1.1' 'nucleotide metabolism.salvage.phosphoribosyltransferases.aprt' 'niben101scf04651_53984-59548' '(at5g11160 : 279.0) adenine phosphoribosyltransferase 5 (APT5); FUNCTIONS IN: adenine phosphoribosyltransferase activity; INVOLVED IN: nucleoside metabolic process, adenine salvage, anaerobic respiration, nucleotide metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenine phosphoribosyl transferase (InterPro:IPR005764), Phosphoribosyltransferase (InterPro:IPR000836); BEST Arabidopsis thaliana protein match is: adenine phosphoribosyl transferase 2 (TAIR:AT1G80050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36924 : 248.0) no description available & (q43199|apt1_wheat : 234.0) Adenine phosphoribosyltransferase 1 (EC 2.4.2.7) (APRT 1) - Triticum aestivum (Wheat) & (gnl|cdd|80977 : 212.0) no description available & (reliability: 558.0) & (original description: Putative APT5, Description = Adenine phosphoribosyltransferase 5, PFAM = PF00156)' T '23.3.1.1' 'nucleotide metabolism.salvage.phosphoribosyltransferases.aprt' 'niben101scf04651_53995-58814' '(at5g11160 : 209.0) adenine phosphoribosyltransferase 5 (APT5); FUNCTIONS IN: adenine phosphoribosyltransferase activity; INVOLVED IN: nucleoside metabolic process, adenine salvage, anaerobic respiration, nucleotide metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenine phosphoribosyl transferase (InterPro:IPR005764), Phosphoribosyltransferase (InterPro:IPR000836); BEST Arabidopsis thaliana protein match is: adenine phosphoribosyl transferase 2 (TAIR:AT1G80050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36924 : 189.0) no description available & (q43199|apt1_wheat : 176.0) Adenine phosphoribosyltransferase 1 (EC 2.4.2.7) (APRT 1) - Triticum aestivum (Wheat) & (gnl|cdd|80977 : 162.0) no description available & (reliability: 418.0) & (original description: Putative APT, Description = Adenine phosphoribosyl transferase, PFAM = PF00156)' T '23.3.1.1' 'nucleotide metabolism.salvage.phosphoribosyltransferases.aprt' 'niben101scf06467_146192-154849' '(gnl|cdd|36924 : 273.0) no description available & (at1g27450 : 255.0) Adenosine phosphoribosyl transferase(E.C:2.4.2.7), involved in the one-step salvage of adenine to AMP.; adenine phosphoribosyl transferase 1 (APT1); CONTAINS InterPro DOMAIN/s: Adenine phosphoribosyl transferase (InterPro:IPR005764), Phosphoribosyltransferase (InterPro:IPR000836); BEST Arabidopsis thaliana protein match is: adenine phosphoribosyl transferase 3 (TAIR:AT4G22570.1). & (q43199|apt1_wheat : 248.0) Adenine phosphoribosyltransferase 1 (EC 2.4.2.7) (APRT 1) - Triticum aestivum (Wheat) & (gnl|cdd|80977 : 234.0) no description available & (reliability: 510.0) & (original description: Putative APT1, Description = Adenine phosphoribosyltransferase 1, PFAM = PF00156)' T '23.3.1.1' 'nucleotide metabolism.salvage.phosphoribosyltransferases.aprt' 'niben101scf06753_74178-82899' '(at4g22570 : 203.0) Encodes an adenine phosphoribosyltransferase (APT; EC 2.4.2.7), which is a constitutively expressed enzyme involved in the one-step salvage of adenine to AMP. APT3 has higher affinity for zeatin, isopentenyladenine and benzyladenine than APT1 but lower Vmax than APT1.; adenine phosphoribosyl transferase 3 (APT3); CONTAINS InterPro DOMAIN/s: Adenine phosphoribosyl transferase (InterPro:IPR005764), Phosphoribosyltransferase (InterPro:IPR000836); BEST Arabidopsis thaliana protein match is: adenine phosphoribosyl transferase 4 (TAIR:AT4G12440.2); Has 8946 Blast hits to 8945 proteins in 2488 species: Archae - 280; Bacteria - 6058; Metazoa - 171; Fungi - 181; Plants - 166; Viruses - 0; Other Eukaryotes - 2090 (source: NCBI BLink). & (gnl|cdd|36924 : 203.0) no description available & (q43199|apt1_wheat : 176.0) Adenine phosphoribosyltransferase 1 (EC 2.4.2.7) (APRT 1) - Triticum aestivum (Wheat) & (gnl|cdd|80977 : 170.0) no description available & (reliability: 406.0) & (original description: Putative APT, Description = Adenine phosphoribosyl transferase, PFAM = PF00156)' T '23.3.1.2' 'nucleotide metabolism.salvage.phosphoribosyltransferases.hgprt' 'nbv0.5scaffold7278_47493-51160' '(at1g71750 : 210.0) Encodes a protein with hypoxanthine-guanine-phosphoribosyltransferase activity. Unlike some related enzymes, it does not appear to act on xanthine in vitro. The enzyme catalyzes reactions occurring in both directions, but appears to prefer acting on guanine, followed by hypoxanthine, in vitro. The enzyme is likely to function in purine salvage pathways and appears to be important for seed germination.; Hypoxanthine-guanine phosphoribosyltransferase (HGPT); FUNCTIONS IN: transferase activity, hypoxanthine phosphoribosyltransferase activity; INVOLVED IN: guanine metabolic process, nucleoside metabolic process, seed germination, hypoxanthine metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hypoxanthine phosphoribosyl transferase (InterPro:IPR005904), Phosphoribosyltransferase (InterPro:IPR000836). & (gnl|cdd|30979 : 155.0) no description available & (gnl|cdd|38577 : 125.0) no description available & (reliability: 420.0) & (original description: Putative hprT, Description = Hypoxanthine-guanine phosphoribosyltransferase, PFAM = PF00156)' T '23.3.1.2' 'nucleotide metabolism.salvage.phosphoribosyltransferases.hgprt' 'niben101scf01942_580396-585177' '(at1g71750 : 268.0) Encodes a protein with hypoxanthine-guanine-phosphoribosyltransferase activity. Unlike some related enzymes, it does not appear to act on xanthine in vitro. The enzyme catalyzes reactions occurring in both directions, but appears to prefer acting on guanine, followed by hypoxanthine, in vitro. The enzyme is likely to function in purine salvage pathways and appears to be important for seed germination.; Hypoxanthine-guanine phosphoribosyltransferase (HGPT); FUNCTIONS IN: transferase activity, hypoxanthine phosphoribosyltransferase activity; INVOLVED IN: guanine metabolic process, nucleoside metabolic process, seed germination, hypoxanthine metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hypoxanthine phosphoribosyl transferase (InterPro:IPR005904), Phosphoribosyltransferase (InterPro:IPR000836). & (gnl|cdd|30979 : 213.0) no description available & (gnl|cdd|38577 : 168.0) no description available & (reliability: 536.0) & (original description: Putative hprT, Description = Hypoxanthine-guanine phosphoribosyltransferase, PFAM = PF00156)' T '23.3.1.3' 'nucleotide metabolism.salvage.phosphoribosyltransferases.upp' 'nbv0.3scaffold25760_855-11101' '(at4g26510 : 760.0) One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.; uridine kinase-like 4 (UKL4); FUNCTIONS IN: uracil phosphoribosyltransferase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: uridine kinase-like 3 (TAIR:AT1G55810.3); Has 12683 Blast hits to 12669 proteins in 2628 species: Archae - 216; Bacteria - 9646; Metazoa - 520; Fungi - 504; Plants - 574; Viruses - 2; Other Eukaryotes - 1221 (source: NCBI BLink). & (gnl|cdd|39404 : 501.0) no description available & (gnl|cdd|30196 : 280.0) no description available & (reliability: 1520.0) & (original description: Putative udkA, Description = Uridine kinase, PFAM = PF14681;PF00485)' T '23.3.1.3' 'nucleotide metabolism.salvage.phosphoribosyltransferases.upp' 'nbv0.3scaffold39997_1408-10711' '(at1g55810 : 780.0) One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.; uridine kinase-like 3 (UKL3); FUNCTIONS IN: uracil phosphoribosyltransferase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: uridine kinase-like 4 (TAIR:AT4G26510.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39404 : 499.0) no description available & (gnl|cdd|30196 : 283.0) no description available & (p26302|kppr_wheat : 80.5) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19) (Phosphopentokinase) (PRKase) (PRK) - Triticum aestivum (Wheat) & (reliability: 1560.0) & (original description: Putative UKL3, Description = Uridine kinase-like protein 3, PFAM = PF14681;PF00485)' T '23.3.1.3' 'nucleotide metabolism.salvage.phosphoribosyltransferases.upp' 'nbv0.5scaffold136_800389-814251' '(at5g40870 : 827.0) Encodes a protein that appears to possess both uridine kinase and uracil phosphoribosyltransferase activities.; uridine kinase/uracil phosphoribosyltransferase 1 (UK/UPRT1); FUNCTIONS IN: uridine kinase activity, uracil phosphoribosyltransferase activity, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, nucleoside metabolic process, metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Phosphoribosyltransferase (InterPro:IPR000836), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: uridine kinase-like 2 (TAIR:AT3G27190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39404 : 524.0) no description available & (gnl|cdd|30196 : 302.0) no description available & (p19824|kppr_chlre : 80.1) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19) (Phosphopentokinase) (PRKase) (PRK) - Chlamydomonas reinhardtii & (reliability: 1654.0) & (original description: Putative UKL1, Description = Uridine kinase-like protein 1, chloroplastic, PFAM = PF14681;PF00485)' T '23.3.1.3' 'nucleotide metabolism.salvage.phosphoribosyltransferases.upp' 'nbv0.5scaffold1844_322727-332598' '(at4g26510 : 683.0) One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.; uridine kinase-like 4 (UKL4); FUNCTIONS IN: uracil phosphoribosyltransferase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: uridine kinase-like 3 (TAIR:AT1G55810.3); Has 12683 Blast hits to 12669 proteins in 2628 species: Archae - 216; Bacteria - 9646; Metazoa - 520; Fungi - 504; Plants - 574; Viruses - 2; Other Eukaryotes - 1221 (source: NCBI BLink). & (gnl|cdd|39404 : 450.0) no description available & (gnl|cdd|30196 : 278.0) no description available & (reliability: 1366.0) & (original description: Putative UKL3, Description = Uridine kinase, PFAM = PF14681;PF00485)' T '23.3.1.3' 'nucleotide metabolism.salvage.phosphoribosyltransferases.upp' 'nbv0.5scaffold2400_297310-301186' '(at4g26510 : 233.0) One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.; uridine kinase-like 4 (UKL4); FUNCTIONS IN: uracil phosphoribosyltransferase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: uridine kinase-like 3 (TAIR:AT1G55810.3); Has 12683 Blast hits to 12669 proteins in 2628 species: Archae - 216; Bacteria - 9646; Metazoa - 520; Fungi - 504; Plants - 574; Viruses - 2; Other Eukaryotes - 1221 (source: NCBI BLink). & (gnl|cdd|39404 : 174.0) no description available & (gnl|cdd|30384 : 149.0) no description available & (reliability: 466.0) & (original description: Putative uprt, Description = Uridine kinase, PFAM = PF14681)' T '23.3.1.3' 'nucleotide metabolism.salvage.phosphoribosyltransferases.upp' 'niben101scf00675_163326-172773' '(at1g55810 : 781.0) One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.; uridine kinase-like 3 (UKL3); FUNCTIONS IN: uracil phosphoribosyltransferase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: uridine kinase-like 4 (TAIR:AT4G26510.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39404 : 495.0) no description available & (gnl|cdd|30196 : 282.0) no description available & (reliability: 1562.0) & (original description: Putative UKL3, Description = Uridine kinase-like protein 3, PFAM = PF14681;PF00485)' T '23.3.1.3' 'nucleotide metabolism.salvage.phosphoribosyltransferases.upp' 'niben101scf03766_842132-852396' '(at3g27440 : 630.0) One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.; uridine kinase-like 5 (UKL5); FUNCTIONS IN: uracil phosphoribosyltransferase activity, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: uridine kinase-like 4 (TAIR:AT4G26510.2); Has 13214 Blast hits to 13202 proteins in 2627 species: Archae - 217; Bacteria - 10041; Metazoa - 552; Fungi - 516; Plants - 596; Viruses - 2; Other Eukaryotes - 1290 (source: NCBI BLink). & (gnl|cdd|39404 : 425.0) no description available & (gnl|cdd|30196 : 287.0) no description available & (reliability: 1260.0) & (original description: Putative UKL5, Description = Uridine kinase-like protein 5, PFAM = PF14681;PF00485)' T '23.3.1.3' 'nucleotide metabolism.salvage.phosphoribosyltransferases.upp' 'niben101scf04847_399254-408716' '(at4g26510 : 751.0) One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.; uridine kinase-like 4 (UKL4); FUNCTIONS IN: uracil phosphoribosyltransferase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: uridine kinase-like 3 (TAIR:AT1G55810.3); Has 12683 Blast hits to 12669 proteins in 2628 species: Archae - 216; Bacteria - 9646; Metazoa - 520; Fungi - 504; Plants - 574; Viruses - 2; Other Eukaryotes - 1221 (source: NCBI BLink). & (gnl|cdd|39404 : 497.0) no description available & (gnl|cdd|30196 : 277.0) no description available & (reliability: 1502.0) & (original description: Putative UKL3, Description = Uridine kinase-like protein 3, PFAM = PF00485;PF14681)' T '23.3.1.3' 'nucleotide metabolism.salvage.phosphoribosyltransferases.upp' 'niben101scf05137_135301-150935' '(p93394|upp_tobac : 404.0) Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase) - Nicotiana tabacum (Common tobacco) & (at3g53900 : 337.0) Encodes UPP, a plastidial uracil phosphoribosyltransferase (UPRT) involved in uracil salvage. Loss-of-function mutation causes dramatic growth retardation, a pale-green to albino phenotype, abnormal root morphology and chloroplastic disorders.; uracil phosphoribosyltransferase (UPP); FUNCTIONS IN: uracil phosphoribosyltransferase activity; INVOLVED IN: cellular response to phosphate starvation, developmental process, nucleoside metabolic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Uracil phosphoribosyl transferase (InterPro:IPR005765); BEST Arabidopsis thaliana protein match is: uridine kinase-like 5 (TAIR:AT3G27440.1); Has 6282 Blast hits to 6282 proteins in 2386 species: Archae - 194; Bacteria - 4411; Metazoa - 238; Fungi - 342; Plants - 200; Viruses - 0; Other Eukaryotes - 897 (source: NCBI BLink). & (gnl|cdd|80534 : 234.0) no description available & (gnl|cdd|39404 : 145.0) no description available & (reliability: 674.0) & (original description: Putative upp, Description = Uracil phosphoribosyltransferase, PFAM = PF14681)' T '23.3.1.3' 'nucleotide metabolism.salvage.phosphoribosyltransferases.upp' 'niben101scf07477_82865-95107' '(p93394|upp_tobac : 434.0) Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase) - Nicotiana tabacum (Common tobacco) & (at3g53900 : 365.0) Encodes UPP, a plastidial uracil phosphoribosyltransferase (UPRT) involved in uracil salvage. Loss-of-function mutation causes dramatic growth retardation, a pale-green to albino phenotype, abnormal root morphology and chloroplastic disorders.; uracil phosphoribosyltransferase (UPP); FUNCTIONS IN: uracil phosphoribosyltransferase activity; INVOLVED IN: cellular response to phosphate starvation, developmental process, nucleoside metabolic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Uracil phosphoribosyl transferase (InterPro:IPR005765); BEST Arabidopsis thaliana protein match is: uridine kinase-like 5 (TAIR:AT3G27440.1); Has 6282 Blast hits to 6282 proteins in 2386 species: Archae - 194; Bacteria - 4411; Metazoa - 238; Fungi - 342; Plants - 200; Viruses - 0; Other Eukaryotes - 897 (source: NCBI BLink). & (gnl|cdd|80534 : 249.0) no description available & (gnl|cdd|39404 : 151.0) no description available & (reliability: 730.0) & (original description: Putative UPP, Description = Uracil phosphoribosyltransferase, PFAM = PF14681)' T '23.3.1.3' 'nucleotide metabolism.salvage.phosphoribosyltransferases.upp' 'niben101scf08523_12338-30853' '(at5g40870 : 832.0) Encodes a protein that appears to possess both uridine kinase and uracil phosphoribosyltransferase activities.; uridine kinase/uracil phosphoribosyltransferase 1 (UK/UPRT1); FUNCTIONS IN: uridine kinase activity, uracil phosphoribosyltransferase activity, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, nucleoside metabolic process, metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Phosphoribosyltransferase (InterPro:IPR000836), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: uridine kinase-like 2 (TAIR:AT3G27190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39404 : 520.0) no description available & (gnl|cdd|30196 : 303.0) no description available & (p19824|kppr_chlre : 81.6) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19) (Phosphopentokinase) (PRKase) (PRK) - Chlamydomonas reinhardtii & (reliability: 1664.0) & (original description: Putative UKL1, Description = Uridine kinase-like protein 1, chloroplastic, PFAM = PF00485;PF14681)' T '23.3.1.3' 'nucleotide metabolism.salvage.phosphoribosyltransferases.upp' 'niben101scf21107_82403-93423' '(at4g26510 : 690.0) One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.; uridine kinase-like 4 (UKL4); FUNCTIONS IN: uracil phosphoribosyltransferase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: uridine kinase-like 3 (TAIR:AT1G55810.3); Has 12683 Blast hits to 12669 proteins in 2628 species: Archae - 216; Bacteria - 9646; Metazoa - 520; Fungi - 504; Plants - 574; Viruses - 2; Other Eukaryotes - 1221 (source: NCBI BLink). & (gnl|cdd|39404 : 454.0) no description available & (gnl|cdd|30196 : 281.0) no description available & (reliability: 1380.0) & (original description: Putative UKL3, Description = Uridine kinase, PFAM = PF14681;PF00485)' T '23.3.2' 'nucleotide metabolism.salvage.nucleoside kinases' '' '' '23.3.2.1' 'nucleotide metabolism.salvage.nucleoside kinases.adenosine kinase' 'niben101scf04090_125389-132038' '(at3g09820 : 603.0) Involved in the salvage synthesis of adenylates and methyl recycling; adenosine kinase 1 (ADK1); FUNCTIONS IN: adenosine kinase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to trehalose-6-phosphate stimulus, adenosine salvage; LOCATED IN: cytosol, apoplast, plasma membrane, membrane; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173), Adenosine kinase (InterPro:IPR001805); BEST Arabidopsis thaliana protein match is: adenosine kinase 2 (TAIR:AT5G03300.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38065 : 512.0) no description available & (o49923|adk_phypa : 478.0) Adenosine kinase (EC 2.7.1.20) (AK) (Adenosine 5'-phosphotransferase) - Physcomitrella patens (Moss) & (gnl|cdd|29352 : 371.0) no description available & (reliability: 1206.0) & (original description: Putative ADK, Description = ADK, PFAM = PF00294)' T '23.3.2.1' 'nucleotide metabolism.salvage.nucleoside kinases.adenosine kinase' 'niben101scf04652_117090-123652' '(at3g09820 : 602.0) Involved in the salvage synthesis of adenylates and methyl recycling; adenosine kinase 1 (ADK1); FUNCTIONS IN: adenosine kinase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to trehalose-6-phosphate stimulus, adenosine salvage; LOCATED IN: cytosol, apoplast, plasma membrane, membrane; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173), Adenosine kinase (InterPro:IPR001805); BEST Arabidopsis thaliana protein match is: adenosine kinase 2 (TAIR:AT5G03300.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38065 : 501.0) no description available & (o49923|adk_phypa : 475.0) Adenosine kinase (EC 2.7.1.20) (AK) (Adenosine 5'-phosphotransferase) - Physcomitrella patens (Moss) & (gnl|cdd|29352 : 362.0) no description available & (reliability: 1204.0) & (original description: Putative adkb, Description = Adenosine kinase b, PFAM = PF00294)' T '23.3.2.1' 'nucleotide metabolism.salvage.nucleoside kinases.adenosine kinase' 'niben101scf05442_278062-286090' '(at3g09820 : 612.0) Involved in the salvage synthesis of adenylates and methyl recycling; adenosine kinase 1 (ADK1); FUNCTIONS IN: adenosine kinase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to trehalose-6-phosphate stimulus, adenosine salvage; LOCATED IN: cytosol, apoplast, plasma membrane, membrane; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173), Adenosine kinase (InterPro:IPR001805); BEST Arabidopsis thaliana protein match is: adenosine kinase 2 (TAIR:AT5G03300.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38065 : 513.0) no description available & (o49923|adk_phypa : 481.0) Adenosine kinase (EC 2.7.1.20) (AK) (Adenosine 5'-phosphotransferase) - Physcomitrella patens (Moss) & (gnl|cdd|29352 : 361.0) no description available & (reliability: 1224.0) & (original description: Putative ADK1, Description = Adenosine kinase 1, PFAM = PF00294)' T '23.3.2.1' 'nucleotide metabolism.salvage.nucleoside kinases.adenosine kinase' 'niben101scf25706_35889-39143' '(at3g09820 : 276.0) Involved in the salvage synthesis of adenylates and methyl recycling; adenosine kinase 1 (ADK1); FUNCTIONS IN: adenosine kinase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to trehalose-6-phosphate stimulus, adenosine salvage; LOCATED IN: cytosol, apoplast, plasma membrane, membrane; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173), Adenosine kinase (InterPro:IPR001805); BEST Arabidopsis thaliana protein match is: adenosine kinase 2 (TAIR:AT5G03300.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38065 : 223.0) no description available & (o49923|adk_phypa : 221.0) Adenosine kinase (EC 2.7.1.20) (AK) (Adenosine 5'-phosphotransferase) - Physcomitrella patens (Moss) & (gnl|cdd|29352 : 166.0) no description available & (reliability: 552.0) & (original description: Putative ADK, Description = Adenosine kinase 2, PFAM = PF00294)' T '23.3.2.2' 'nucleotide metabolism.salvage.nucleoside kinases.uridine kinase' 'nbv0.3scaffold6787_22643-34212' '(at1g73980 : 900.0) Phosphoribulokinase / Uridine kinase family; FUNCTIONS IN: adenylate cyclase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, cAMP biosynthetic process, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764), Adenylate cyclase (InterPro:IPR008172); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G26190.1); Has 4488 Blast hits to 4465 proteins in 1702 species: Archae - 37; Bacteria - 3307; Metazoa - 347; Fungi - 118; Plants - 328; Viruses - 2; Other Eukaryotes - 349 (source: NCBI BLink). & (gnl|cdd|30201 : 189.0) no description available & (gnl|cdd|39404 : 187.0) no description available & (reliability: 1800.0) & (original description: Putative udkC, Description = Uridine-cytidine kinase C, PFAM = PF00485;PF01928)' T '23.3.2.2' 'nucleotide metabolism.salvage.nucleoside kinases.uridine kinase' 'nbv0.3scaffold40177_149-7361' '(at2g01460 : 657.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G26190.1). & (gnl|cdd|30201 : 136.0) no description available & (gnl|cdd|39404 : 87.3) no description available & (reliability: 1314.0) & (original description: Putative Os04g0280250, Description = Os04g0280250 protein, PFAM = )' T '23.3.2.2' 'nucleotide metabolism.salvage.nucleoside kinases.uridine kinase' 'nbv0.5scaffold857_418637-428245' '(at1g26190 : 926.0) Phosphoribulokinase / Uridine kinase family; FUNCTIONS IN: adenylate cyclase activity, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, cAMP biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764), Adenylate cyclase (InterPro:IPR008172); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G73980.1); Has 4771 Blast hits to 4715 proteins in 1747 species: Archae - 39; Bacteria - 3460; Metazoa - 396; Fungi - 136; Plants - 334; Viruses - 2; Other Eukaryotes - 404 (source: NCBI BLink). & (gnl|cdd|39404 : 196.0) no description available & (gnl|cdd|30201 : 192.0) no description available & (reliability: 1852.0) & (original description: Putative udkC, Description = Uridine-cytidine kinase C, PFAM = PF00485;PF01928)' T '23.3.2.2' 'nucleotide metabolism.salvage.nucleoside kinases.uridine kinase' 'nbv0.5scaffold6480_93057-102036' '(at1g03030 : 355.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); Has 3038 Blast hits to 3038 proteins in 1114 species: Archae - 9; Bacteria - 2199; Metazoa - 179; Fungi - 248; Plants - 85; Viruses - 0; Other Eukaryotes - 318 (source: NCBI BLink). & (gnl|cdd|37913 : 271.0) no description available & (gnl|cdd|82901 : 148.0) no description available & (reliability: 710.0) & (original description: Putative Sb08g020570, Description = Putative uncharacterized protein Sb08g020570, PFAM = PF00485)' T '23.3.2.2' 'nucleotide metabolism.salvage.nucleoside kinases.uridine kinase' 'niben044scf00010839ctg001_228-9581' '(at1g73980 : 781.0) Phosphoribulokinase / Uridine kinase family; FUNCTIONS IN: adenylate cyclase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, cAMP biosynthetic process, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764), Adenylate cyclase (InterPro:IPR008172); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G26190.1); Has 4488 Blast hits to 4465 proteins in 1702 species: Archae - 37; Bacteria - 3307; Metazoa - 347; Fungi - 118; Plants - 328; Viruses - 2; Other Eukaryotes - 349 (source: NCBI BLink). & (gnl|cdd|30201 : 192.0) no description available & (gnl|cdd|39404 : 155.0) no description available & (reliability: 1562.0) & (original description: Putative udkC, Description = Uridine-cytidine kinase C, PFAM = PF00485;PF01928)' T '23.3.2.2' 'nucleotide metabolism.salvage.nucleoside kinases.uridine kinase' 'niben044scf00023578ctg008_5823-26799' '(at2g01460 : 1365.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G26190.1). & (gnl|cdd|30201 : 168.0) no description available & (gnl|cdd|39404 : 120.0) no description available & (reliability: 2730.0) & (original description: Putative At2g01460, Description = Phosphoribulokinase/uridine kinase domain protein, PFAM = PF00485;PF00485)' T '23.3.2.2' 'nucleotide metabolism.salvage.nucleoside kinases.uridine kinase' 'niben044scf00028284ctg007_1-4132' '(at1g26190 : 242.0) Phosphoribulokinase / Uridine kinase family; FUNCTIONS IN: adenylate cyclase activity, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, cAMP biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764), Adenylate cyclase (InterPro:IPR008172); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G73980.1); Has 4771 Blast hits to 4715 proteins in 1747 species: Archae - 39; Bacteria - 3460; Metazoa - 396; Fungi - 136; Plants - 334; Viruses - 2; Other Eukaryotes - 404 (source: NCBI BLink). & (gnl|cdd|30201 : 98.4) no description available & (reliability: 484.0) & (original description: Putative udkC, Description = Uridine-cytidine kinase C, PFAM = PF00485)' T '23.3.2.2' 'nucleotide metabolism.salvage.nucleoside kinases.uridine kinase' 'niben101scf01661_271405-300175' '(at1g26190 : 899.0) Phosphoribulokinase / Uridine kinase family; FUNCTIONS IN: adenylate cyclase activity, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, cAMP biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764), Adenylate cyclase (InterPro:IPR008172); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G73980.1); Has 4771 Blast hits to 4715 proteins in 1747 species: Archae - 39; Bacteria - 3460; Metazoa - 396; Fungi - 136; Plants - 334; Viruses - 2; Other Eukaryotes - 404 (source: NCBI BLink). & (gnl|cdd|39404 : 194.0) no description available & (gnl|cdd|30201 : 193.0) no description available & (reliability: 1798.0) & (original description: Putative udkC, Description = Uridine-cytidine kinase C, PFAM = PF01928;PF00485)' T '23.3.2.2' 'nucleotide metabolism.salvage.nucleoside kinases.uridine kinase' 'niben101scf05989_400876-410965' '(at1g26190 : 933.0) Phosphoribulokinase / Uridine kinase family; FUNCTIONS IN: adenylate cyclase activity, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, cAMP biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764), Adenylate cyclase (InterPro:IPR008172); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G73980.1); Has 4771 Blast hits to 4715 proteins in 1747 species: Archae - 39; Bacteria - 3460; Metazoa - 396; Fungi - 136; Plants - 334; Viruses - 2; Other Eukaryotes - 404 (source: NCBI BLink). & (gnl|cdd|39404 : 204.0) no description available & (gnl|cdd|30201 : 195.0) no description available & (reliability: 1866.0) & (original description: Putative udkC, Description = Uridine-cytidine kinase C, PFAM = PF01928;PF00485)' T '23.3.2.2' 'nucleotide metabolism.salvage.nucleoside kinases.uridine kinase' 'niben101scf08127_809699-821391' '(at1g26190 : 915.0) Phosphoribulokinase / Uridine kinase family; FUNCTIONS IN: adenylate cyclase activity, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, cAMP biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764), Adenylate cyclase (InterPro:IPR008172); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G73980.1); Has 4771 Blast hits to 4715 proteins in 1747 species: Archae - 39; Bacteria - 3460; Metazoa - 396; Fungi - 136; Plants - 334; Viruses - 2; Other Eukaryotes - 404 (source: NCBI BLink). & (gnl|cdd|30201 : 189.0) no description available & (gnl|cdd|39404 : 186.0) no description available & (reliability: 1830.0) & (original description: Putative udkC, Description = Uridine-cytidine kinase C, PFAM = PF01928;PF00485)' T '23.3.2.2' 'nucleotide metabolism.salvage.nucleoside kinases.uridine kinase' 'niben101scf08127_809732-821412' '(at1g26190 : 895.0) Phosphoribulokinase / Uridine kinase family; FUNCTIONS IN: adenylate cyclase activity, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, cAMP biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764), Adenylate cyclase (InterPro:IPR008172); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G73980.1); Has 4771 Blast hits to 4715 proteins in 1747 species: Archae - 39; Bacteria - 3460; Metazoa - 396; Fungi - 136; Plants - 334; Viruses - 2; Other Eukaryotes - 404 (source: NCBI BLink). & (gnl|cdd|39404 : 187.0) no description available & (gnl|cdd|30201 : 178.0) no description available & (reliability: 1790.0) & (original description: Putative udkC, Description = Uridine-cytidine kinase C, PFAM = PF01928;PF00485)' T '23.3.2.2' 'nucleotide metabolism.salvage.nucleoside kinases.uridine kinase' 'niben101scf09745_198-9265' '(at1g03030 : 355.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); Has 3038 Blast hits to 3038 proteins in 1114 species: Archae - 9; Bacteria - 2199; Metazoa - 179; Fungi - 248; Plants - 85; Viruses - 0; Other Eukaryotes - 318 (source: NCBI BLink). & (gnl|cdd|37913 : 275.0) no description available & (gnl|cdd|82901 : 154.0) no description available & (reliability: 710.0) & (original description: Putative At1g03030, Description = At1g03030, PFAM = PF00485)' T '23.3.2.3' 'nucleotide metabolism.salvage.nucleoside kinases.thymidine kinase' 'nbv0.5scaffold2826_67566-72212' '(o81263|kith_orysa : 318.0) Thymidine kinase (EC 2.7.1.21) - Oryza sativa (Rice) & (at3g07800 : 295.0) Thymidine kinase; FUNCTIONS IN: thymidine kinase activity, ATP binding; INVOLVED IN: pyrimidine deoxyribonucleoside interconversion, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidine kinase (InterPro:IPR001267), Thymidine kinase, conserved site (InterPro:IPR020633); BEST Arabidopsis thaliana protein match is: Thymidine kinase (TAIR:AT5G23070.1); Has 4049 Blast hits to 4037 proteins in 1500 species: Archae - 38; Bacteria - 2547; Metazoa - 142; Fungi - 7; Plants - 74; Viruses - 356; Other Eukaryotes - 885 (source: NCBI BLink). & (gnl|cdd|38335 : 266.0) no description available & (gnl|cdd|84654 : 192.0) no description available & (reliability: 590.0) & (original description: Putative TK1A, Description = Thymidine kinase a, PFAM = PF00265)' T '23.3.2.3' 'nucleotide metabolism.salvage.nucleoside kinases.thymidine kinase' 'niben101scf00629_58930-74129' '(o81263|kith_orysa : 314.0) Thymidine kinase (EC 2.7.1.21) - Oryza sativa (Rice) & (at3g07800 : 297.0) Thymidine kinase; FUNCTIONS IN: thymidine kinase activity, ATP binding; INVOLVED IN: pyrimidine deoxyribonucleoside interconversion, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidine kinase (InterPro:IPR001267), Thymidine kinase, conserved site (InterPro:IPR020633); BEST Arabidopsis thaliana protein match is: Thymidine kinase (TAIR:AT5G23070.1); Has 4049 Blast hits to 4037 proteins in 1500 species: Archae - 38; Bacteria - 2547; Metazoa - 142; Fungi - 7; Plants - 74; Viruses - 356; Other Eukaryotes - 885 (source: NCBI BLink). & (gnl|cdd|38335 : 263.0) no description available & (gnl|cdd|84654 : 190.0) no description available & (reliability: 594.0) & (original description: Putative TK1A, Description = Thymidine kinase a, PFAM = PF00265)' T '23.3.2.3' 'nucleotide metabolism.salvage.nucleoside kinases.thymidine kinase' 'niben101scf01987_179664-186177' '(o81263|kith_orysa : 310.0) Thymidine kinase (EC 2.7.1.21) - Oryza sativa (Rice) & (at5g23070 : 301.0) Thymidine kinase; FUNCTIONS IN: thymidine kinase activity, ATP binding; INVOLVED IN: pyrimidine deoxyribonucleoside interconversion, anaerobic respiration; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidine kinase (InterPro:IPR001267), Thymidine kinase, conserved site (InterPro:IPR020633); BEST Arabidopsis thaliana protein match is: Thymidine kinase (TAIR:AT3G07800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38335 : 261.0) no description available & (gnl|cdd|84654 : 186.0) no description available & (reliability: 602.0) & (original description: Putative thyB, Description = Thymidine kinase, PFAM = PF00265)' T '23.3.2.3' 'nucleotide metabolism.salvage.nucleoside kinases.thymidine kinase' 'niben101scf07682_111938-121179' '(o81263|kith_orysa : 296.0) Thymidine kinase (EC 2.7.1.21) - Oryza sativa (Rice) & (at5g23070 : 288.0) Thymidine kinase; FUNCTIONS IN: thymidine kinase activity, ATP binding; INVOLVED IN: pyrimidine deoxyribonucleoside interconversion, anaerobic respiration; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidine kinase (InterPro:IPR001267), Thymidine kinase, conserved site (InterPro:IPR020633); BEST Arabidopsis thaliana protein match is: Thymidine kinase (TAIR:AT3G07800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38335 : 248.0) no description available & (gnl|cdd|84654 : 182.0) no description available & (reliability: 576.0) & (original description: Putative TK1A, Description = Thymidine kinase a, PFAM = PF00265)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.3scaffold676_5819-17158' '(at3g12600 : 195.0) nudix hydrolase homolog 16 (NUDT16); FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 12 (TAIR:AT1G12880.1); Has 1172 Blast hits to 1171 proteins in 346 species: Archae - 0; Bacteria - 480; Metazoa - 236; Fungi - 118; Plants - 233; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|38050 : 118.0) no description available & (gnl|cdd|72903 : 108.0) no description available & (reliability: 390.0) & (original description: Putative NUDT16, Description = Nudix hydrolase 16, mitochondrial, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.3scaffold2236_53073-59245' '(at5g20070 : 570.0) nudix hydrolase homolog 19 (NUDX19); FUNCTIONS IN: hydrolase activity, metal ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc ribbon, NADH pyrophosphatase (InterPro:IPR015376), NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), NADH pyrophosphatase-like, N-terminal (InterPro:IPR015375), NUDIX hydrolase domain (InterPro:IPR000086); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38294 : 276.0) no description available & (gnl|cdd|32645 : 207.0) no description available & (reliability: 1140.0) & (original description: Putative NUDT19, Description = Nudix hydrolase 19, chloroplastic, PFAM = PF00293;PF09297;PF09296)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.3scaffold4100_1888-8859' '(at1g28960 : 355.0) nudix hydrolase homolog 15 (NUDX15); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086), NUDIX hydrolase, AtNUDT22 (InterPro:IPR017397); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 22 (TAIR:AT2G33980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38279 : 187.0) no description available & (gnl|cdd|72884 : 176.0) no description available & (reliability: 710.0) & (original description: Putative NUDT15, Description = Nudix hydrolase 15, mitochondrial, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.3scaffold4987_14004-21829' '(at3g46200 : 304.0) nudix hydrolase homolog 9 (NUDT9); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); Has 111 Blast hits to 111 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 56; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 608.0) & (original description: Putative NUDT9, Description = Nudix hydrolase 9, PFAM = )' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.3scaffold21616_1-4823' '(at3g12600 : 189.0) nudix hydrolase homolog 16 (NUDT16); FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 12 (TAIR:AT1G12880.1); Has 1172 Blast hits to 1171 proteins in 346 species: Archae - 0; Bacteria - 480; Metazoa - 236; Fungi - 118; Plants - 233; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|38050 : 119.0) no description available & (gnl|cdd|72903 : 111.0) no description available & (reliability: 378.0) & (original description: Putative NUDX13, Description = Nudix hydrolase 13, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.3scaffold35993_5938-13475' '(at5g47240 : 365.0) nudix hydrolase homolog 8 (NUDT8); FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to wounding; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 2 (TAIR:AT5G47650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35867 : 292.0) no description available & (gnl|cdd|72906 : 179.0) no description available & (reliability: 730.0) & (original description: Putative NUDT8, Description = Nudix hydrolase 8, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.3scaffold48393_12489-15571' '(at5g19460 : 429.0) nudix hydrolase homolog 20 (NUDT20); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 24 (TAIR:AT5G19470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72896 : 222.0) no description available & (gnl|cdd|39514 : 173.0) no description available & (reliability: 858.0) & (original description: Putative NUDT20, Description = Nudix hydrolase 20, chloroplastic, PFAM = PF00293;PF15916)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.3scaffold53478_3578-9153' '(at5g47240 : 231.0) nudix hydrolase homolog 8 (NUDT8); FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to wounding; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 2 (TAIR:AT5G47650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35867 : 201.0) no description available & (gnl|cdd|72906 : 106.0) no description available & (reliability: 462.0) & (original description: Putative GFG1, Description = Nudix hydrolase 2, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.3scaffold59490_611-3924' '(at2g01670 : 184.0) nudix hydrolase homolog 17 (NUDT17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 18 (TAIR:AT1G14860.1); Has 1036 Blast hits to 1035 proteins in 308 species: Archae - 0; Bacteria - 361; Metazoa - 217; Fungi - 119; Plants - 237; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|38050 : 141.0) no description available & (gnl|cdd|72903 : 126.0) no description available & (reliability: 368.0) & (original description: Putative NUDT17, Description = Nudix hydrolase 17, mitochondrial, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.3scaffold70858_2260-9105' '(at2g42070 : 335.0) nudix hydrolase homolog 23 (NUDX23); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); Has 7171 Blast hits to 7171 proteins in 1678 species: Archae - 149; Bacteria - 5807; Metazoa - 107; Fungi - 42; Plants - 74; Viruses - 1; Other Eukaryotes - 991 (source: NCBI BLink). & (gnl|cdd|72897 : 198.0) no description available & (gnl|cdd|38294 : 171.0) no description available & (reliability: 670.0) & (original description: Putative adpP, Description = ADP-ribose pyrophosphatase, PFAM = PF00293;PF14803)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.5scaffold99_409533-430829' '(at2g42070 : 338.0) nudix hydrolase homolog 23 (NUDX23); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); Has 7171 Blast hits to 7171 proteins in 1678 species: Archae - 149; Bacteria - 5807; Metazoa - 107; Fungi - 42; Plants - 74; Viruses - 1; Other Eukaryotes - 991 (source: NCBI BLink). & (gnl|cdd|72897 : 202.0) no description available & (gnl|cdd|38294 : 176.0) no description available & (reliability: 676.0) & (original description: Putative NUDT23, Description = Nudix hydrolase 23, chloroplastic, PFAM = PF00293;PF14803)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.5scaffold122_709414-728936' '(at3g12600 : 221.0) nudix hydrolase homolog 16 (NUDT16); FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 12 (TAIR:AT1G12880.1); Has 1172 Blast hits to 1171 proteins in 346 species: Archae - 0; Bacteria - 480; Metazoa - 236; Fungi - 118; Plants - 233; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|38050 : 132.0) no description available & (gnl|cdd|72903 : 111.0) no description available & (reliability: 442.0) & (original description: Putative Sb01g003940, Description = Putative uncharacterized protein Sb01g003940, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.5scaffold255_159370-164945' '(at5g47240 : 209.0) nudix hydrolase homolog 8 (NUDT8); FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to wounding; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 2 (TAIR:AT5G47650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35867 : 185.0) no description available & (gnl|cdd|72906 : 88.8) no description available & (reliability: 418.0) & (original description: Putative GFG1, Description = Nudix hydrolase 2, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.5scaffold540_399442-405199' '(at5g47650 : 306.0) Encodes an ADP-ribose pyrophosphatase that confers enhanced tolerance to oxidative stress.; nudix hydrolase homolog 2 (NUDT2); FUNCTIONS IN: hydrolase activity, ADP-ribose diphosphatase activity, NAD or NADH binding; INVOLVED IN: response to oxidative stress; LOCATED IN: cytosol; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 10 (TAIR:AT4G25434.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35867 : 269.0) no description available & (gnl|cdd|72906 : 149.0) no description available & (reliability: 612.0) & (original description: Putative NUDT2, Description = Nudix hydrolase 2, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.5scaffold600_639247-644317' '(gnl|cdd|35867 : 260.0) no description available & (at5g47650 : 251.0) Encodes an ADP-ribose pyrophosphatase that confers enhanced tolerance to oxidative stress.; nudix hydrolase homolog 2 (NUDT2); FUNCTIONS IN: hydrolase activity, ADP-ribose diphosphatase activity, NAD or NADH binding; INVOLVED IN: response to oxidative stress; LOCATED IN: cytosol; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 10 (TAIR:AT4G25434.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72906 : 148.0) no description available & (reliability: 502.0) & (original description: Putative NUDT7, Description = Nudix hydrolase 7, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.5scaffold2142_217412-228268' '(at3g46200 : 311.0) nudix hydrolase homolog 9 (NUDT9); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); Has 111 Blast hits to 111 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 56; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 622.0) & (original description: Putative NUDT9, Description = Nudix hydrolase 9, PFAM = )' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.5scaffold2206_253507-261332' '(at3g46200 : 275.0) nudix hydrolase homolog 9 (NUDT9); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); Has 111 Blast hits to 111 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 56; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 550.0) & (original description: Putative NUDT9, Description = Nudix hydrolase 9, PFAM = )' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.5scaffold3159_106173-112284' '(at3g12600 : 223.0) nudix hydrolase homolog 16 (NUDT16); FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 12 (TAIR:AT1G12880.1); Has 1172 Blast hits to 1171 proteins in 346 species: Archae - 0; Bacteria - 480; Metazoa - 236; Fungi - 118; Plants - 233; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|38050 : 129.0) no description available & (gnl|cdd|72903 : 111.0) no description available & (reliability: 446.0) & (original description: Putative NUDT16, Description = Nudix hydrolase 16, mitochondrial, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'nbv0.5scaffold3202_100281-106935' '(at3g12600 : 204.0) nudix hydrolase homolog 16 (NUDT16); FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 12 (TAIR:AT1G12880.1); Has 1172 Blast hits to 1171 proteins in 346 species: Archae - 0; Bacteria - 480; Metazoa - 236; Fungi - 118; Plants - 233; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|38050 : 119.0) no description available & (gnl|cdd|72903 : 107.0) no description available & (reliability: 408.0) & (original description: Putative NUDT4, Description = Nudix hydrolase-like protein, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben044scf00001673ctg013_5058-10499' '(at4g11980 : 261.0) nudix hydrolase homolog 14 (NUDX14); FUNCTIONS IN: hydrolase activity, ADP-sugar diphosphatase activity, ADP-ribose pyrophosphohydrolase activity, ADP-glucose pyrophosphohydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38251 : 128.0) no description available & (gnl|cdd|72882 : 89.1) no description available & (reliability: 522.0) & (original description: Putative ASPP, Description = Nudix hydrolase 14, chloroplastic, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben044scf00001981ctg001_13669-19832' '(at4g25434 : 327.0) nudix hydrolase homolog 10 (NUDT10); FUNCTIONS IN: ADP-ribose diphosphatase activity, NAD or NADH binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 2 (TAIR:AT5G47650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35867 : 295.0) no description available & (gnl|cdd|72906 : 159.0) no description available & (reliability: 654.0) & (original description: Putative GFG1, Description = Nudix hydrolase 2, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben044scf00005429ctg010_1-2697' '(at5g47240 : 234.0) nudix hydrolase homolog 8 (NUDT8); FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to wounding; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 2 (TAIR:AT5G47650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35867 : 179.0) no description available & (reliability: 468.0) & (original description: Putative BnaC08g47780D, Description = BnaC08g47780D protein, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben044scf00011898ctg004_5237-8919' '(at2g01670 : 179.0) nudix hydrolase homolog 17 (NUDT17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 18 (TAIR:AT1G14860.1); Has 1036 Blast hits to 1035 proteins in 308 species: Archae - 0; Bacteria - 361; Metazoa - 217; Fungi - 119; Plants - 237; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|38050 : 151.0) no description available & (gnl|cdd|72903 : 137.0) no description available & (reliability: 358.0) & (original description: Putative NUDT17, Description = Nudix hydrolase 17, mitochondrial, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben044scf00035354ctg002_9587-12562' '(gnl|cdd|35867 : 207.0) no description available & (at5g47650 : 177.0) Encodes an ADP-ribose pyrophosphatase that confers enhanced tolerance to oxidative stress.; nudix hydrolase homolog 2 (NUDT2); FUNCTIONS IN: hydrolase activity, ADP-ribose diphosphatase activity, NAD or NADH binding; INVOLVED IN: response to oxidative stress; LOCATED IN: cytosol; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 10 (TAIR:AT4G25434.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72906 : 161.0) no description available & (reliability: 354.0) & (original description: Putative NUDX2, Description = Nudix hydrolase 2, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben044scf00047825ctg002_4350-10927' '(at4g11980 : 318.0) nudix hydrolase homolog 14 (NUDX14); FUNCTIONS IN: hydrolase activity, ADP-sugar diphosphatase activity, ADP-ribose pyrophosphohydrolase activity, ADP-glucose pyrophosphohydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38251 : 148.0) no description available & (gnl|cdd|72882 : 102.0) no description available & (reliability: 636.0) & (original description: Putative ASPP, Description = Nudix hydrolase 14, chloroplastic, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101ctg16366_1-10540' '(at3g46200 : 349.0) nudix hydrolase homolog 9 (NUDT9); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); Has 111 Blast hits to 111 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 56; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 698.0) & (original description: Putative NUDT9, Description = Nudix hydrolase 9, PFAM = )' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf00268_385683-391218' '(at5g47650 : 319.0) Encodes an ADP-ribose pyrophosphatase that confers enhanced tolerance to oxidative stress.; nudix hydrolase homolog 2 (NUDT2); FUNCTIONS IN: hydrolase activity, ADP-ribose diphosphatase activity, NAD or NADH binding; INVOLVED IN: response to oxidative stress; LOCATED IN: cytosol; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 10 (TAIR:AT4G25434.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35867 : 293.0) no description available & (gnl|cdd|72906 : 182.0) no description available & (reliability: 638.0) & (original description: Putative NUDT2, Description = Nudix hydrolase 2, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf00481_261426-267892' '(at3g12600 : 212.0) nudix hydrolase homolog 16 (NUDT16); FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 12 (TAIR:AT1G12880.1); Has 1172 Blast hits to 1171 proteins in 346 species: Archae - 0; Bacteria - 480; Metazoa - 236; Fungi - 118; Plants - 233; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|38050 : 125.0) no description available & (gnl|cdd|72903 : 112.0) no description available & (reliability: 424.0) & (original description: Putative NUDT16, Description = Nudix hydrolase 16, mitochondrial, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf00542_186221-191176' '(at2g01670 : 192.0) nudix hydrolase homolog 17 (NUDT17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 18 (TAIR:AT1G14860.1); Has 1036 Blast hits to 1035 proteins in 308 species: Archae - 0; Bacteria - 361; Metazoa - 217; Fungi - 119; Plants - 237; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|38050 : 142.0) no description available & (gnl|cdd|72903 : 113.0) no description available & (reliability: 384.0) & (original description: Putative NUDT17, Description = Nudix hydrolase 17, mitochondrial, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf00940_38233-51739' '(at3g46200 : 112.0) nudix hydrolase homolog 9 (NUDT9); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); Has 111 Blast hits to 111 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 56; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative NUDT9, Description = Nudix hydrolase 9, PFAM = )' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf01308_295244-299317' '(at1g28960 : 256.0) nudix hydrolase homolog 15 (NUDX15); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086), NUDIX hydrolase, AtNUDT22 (InterPro:IPR017397); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 22 (TAIR:AT2G33980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38279 : 176.0) no description available & (gnl|cdd|72884 : 164.0) no description available & (reliability: 512.0) & (original description: Putative NUDT15, Description = Nudix hydrolase 15, mitochondrial, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf01535_150612-156372' '(at5g47650 : 330.0) Encodes an ADP-ribose pyrophosphatase that confers enhanced tolerance to oxidative stress.; nudix hydrolase homolog 2 (NUDT2); FUNCTIONS IN: hydrolase activity, ADP-ribose diphosphatase activity, NAD or NADH binding; INVOLVED IN: response to oxidative stress; LOCATED IN: cytosol; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 10 (TAIR:AT4G25434.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35867 : 294.0) no description available & (gnl|cdd|72906 : 174.0) no description available & (reliability: 660.0) & (original description: Putative NUDT10, Description = Nudix hydrolase 10, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf01596_175808-179795' '(at2g01670 : 189.0) nudix hydrolase homolog 17 (NUDT17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 18 (TAIR:AT1G14860.1); Has 1036 Blast hits to 1035 proteins in 308 species: Archae - 0; Bacteria - 361; Metazoa - 217; Fungi - 119; Plants - 237; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|38050 : 136.0) no description available & (gnl|cdd|72903 : 126.0) no description available & (reliability: 378.0) & (original description: Putative NUDT17, Description = Nudix hydrolase 17, mitochondrial, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf01688_315145-352468' '(at1g79690 : 1055.0) nudix hydrolase homolog 3 (NUDT3); FUNCTIONS IN: dipeptidyl-peptidase activity, hydrolase activity; INVOLVED IN: proteolysis; LOCATED IN: cytosol, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Peptidase M49, dipeptidyl-peptidase III (InterPro:IPR005317), NUDIX hydrolase domain (InterPro:IPR000086); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72927 : 170.0) no description available & (reliability: 2110.0) & (original description: Putative NUDT3, Description = Nudix hydrolase 3, PFAM = PF00293;PF03571)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf01695_223794-237239' '(at5g47650 : 355.0) Encodes an ADP-ribose pyrophosphatase that confers enhanced tolerance to oxidative stress.; nudix hydrolase homolog 2 (NUDT2); FUNCTIONS IN: hydrolase activity, ADP-ribose diphosphatase activity, NAD or NADH binding; INVOLVED IN: response to oxidative stress; LOCATED IN: cytosol; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 10 (TAIR:AT4G25434.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35867 : 314.0) no description available & (gnl|cdd|72906 : 192.0) no description available & (reliability: 710.0) & (original description: Putative NUDT2, Description = Nudix hydrolase 2, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf01771_47110-52855' '(at5g47240 : 392.0) nudix hydrolase homolog 8 (NUDT8); FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to wounding; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 2 (TAIR:AT5G47650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35867 : 295.0) no description available & (gnl|cdd|72906 : 185.0) no description available & (reliability: 784.0) & (original description: Putative GFG1, Description = Nudix hydrolase 2, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf01911_486440-496864' '(at5g20070 : 569.0) nudix hydrolase homolog 19 (NUDX19); FUNCTIONS IN: hydrolase activity, metal ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc ribbon, NADH pyrophosphatase (InterPro:IPR015376), NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), NADH pyrophosphatase-like, N-terminal (InterPro:IPR015375), NUDIX hydrolase domain (InterPro:IPR000086); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38294 : 275.0) no description available & (gnl|cdd|32645 : 207.0) no description available & (reliability: 1138.0) & (original description: Putative npy1, Description = NADH pyrophosphatase, PFAM = PF09297;PF09296;PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf02275_186319-192619' '(at3g12600 : 214.0) nudix hydrolase homolog 16 (NUDT16); FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 12 (TAIR:AT1G12880.1); Has 1172 Blast hits to 1171 proteins in 346 species: Archae - 0; Bacteria - 480; Metazoa - 236; Fungi - 118; Plants - 233; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|38050 : 123.0) no description available & (gnl|cdd|72903 : 109.0) no description available & (reliability: 428.0) & (original description: Putative NUDT16, Description = Nudix hydrolase 16, mitochondrial, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf02329_39188-50041' '(at3g46200 : 353.0) nudix hydrolase homolog 9 (NUDT9); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); Has 111 Blast hits to 111 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 56; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 706.0) & (original description: Putative NUDT9, Description = Nudix hydrolase 9, PFAM = )' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf02329_42216-50060' '(at3g46200 : 291.0) nudix hydrolase homolog 9 (NUDT9); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); Has 111 Blast hits to 111 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 56; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 582.0) & (original description: Putative NUDT9, Description = Nudix hydrolase 9, PFAM = )' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf02793_2097774-2121877' '(at2g42070 : 303.0) nudix hydrolase homolog 23 (NUDX23); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); Has 7171 Blast hits to 7171 proteins in 1678 species: Archae - 149; Bacteria - 5807; Metazoa - 107; Fungi - 42; Plants - 74; Viruses - 1; Other Eukaryotes - 991 (source: NCBI BLink). & (gnl|cdd|72897 : 180.0) no description available & (gnl|cdd|38294 : 163.0) no description available & (reliability: 606.0) & (original description: Putative NUDT23, Description = Nudix hydrolase 23, chloroplastic, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf03202_973694-980561' '(at1g28960 : 217.0) nudix hydrolase homolog 15 (NUDX15); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086), NUDIX hydrolase, AtNUDT22 (InterPro:IPR017397); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 22 (TAIR:AT2G33980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72884 : 158.0) no description available & (gnl|cdd|38279 : 155.0) no description available & (reliability: 434.0) & (original description: Putative NUDT11, Description = Nudix hydrolase 11, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf04198_576187-600177' '(at3g12600 : 217.0) nudix hydrolase homolog 16 (NUDT16); FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 12 (TAIR:AT1G12880.1); Has 1172 Blast hits to 1171 proteins in 346 species: Archae - 0; Bacteria - 480; Metazoa - 236; Fungi - 118; Plants - 233; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|38050 : 132.0) no description available & (gnl|cdd|72903 : 111.0) no description available & (reliability: 434.0) & (original description: Putative NUDT17, Description = Nudix hydrolase 17, mitochondrial, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf04847_59530-64963' '(at5g47650 : 335.0) Encodes an ADP-ribose pyrophosphatase that confers enhanced tolerance to oxidative stress.; nudix hydrolase homolog 2 (NUDT2); FUNCTIONS IN: hydrolase activity, ADP-ribose diphosphatase activity, NAD or NADH binding; INVOLVED IN: response to oxidative stress; LOCATED IN: cytosol; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 10 (TAIR:AT4G25434.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35867 : 314.0) no description available & (gnl|cdd|72906 : 178.0) no description available & (reliability: 670.0) & (original description: Putative NUDT2, Description = Nudix hydrolase 2, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf04911_47176-50479' '(at2g01670 : 183.0) nudix hydrolase homolog 17 (NUDT17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 18 (TAIR:AT1G14860.1); Has 1036 Blast hits to 1035 proteins in 308 species: Archae - 0; Bacteria - 361; Metazoa - 217; Fungi - 119; Plants - 237; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|38050 : 143.0) no description available & (gnl|cdd|72903 : 127.0) no description available & (reliability: 366.0) & (original description: Putative NUDT21, Description = Nudix hydrolase 21, chloroplastic, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf05251_153430-156917' '(at2g01670 : 176.0) nudix hydrolase homolog 17 (NUDT17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 18 (TAIR:AT1G14860.1); Has 1036 Blast hits to 1035 proteins in 308 species: Archae - 0; Bacteria - 361; Metazoa - 217; Fungi - 119; Plants - 237; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|38050 : 148.0) no description available & (gnl|cdd|72903 : 133.0) no description available & (reliability: 352.0) & (original description: Putative NUDT17, Description = Nudix hydrolase 17, mitochondrial, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf06912_206080-212631' '(at4g11980 : 380.0) nudix hydrolase homolog 14 (NUDX14); FUNCTIONS IN: hydrolase activity, ADP-sugar diphosphatase activity, ADP-ribose pyrophosphohydrolase activity, ADP-glucose pyrophosphohydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38251 : 160.0) no description available & (gnl|cdd|72882 : 103.0) no description available & (reliability: 760.0) & (original description: Putative NUDT14, Description = Nudix hydrolase 14, chloroplastic, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf07121_11175-45333' '(at2g42070 : 344.0) nudix hydrolase homolog 23 (NUDX23); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); Has 7171 Blast hits to 7171 proteins in 1678 species: Archae - 149; Bacteria - 5807; Metazoa - 107; Fungi - 42; Plants - 74; Viruses - 1; Other Eukaryotes - 991 (source: NCBI BLink). & (gnl|cdd|72897 : 204.0) no description available & (gnl|cdd|38294 : 177.0) no description available & (reliability: 688.0) & (original description: Putative nudC, Description = NADH pyrophosphatase, PFAM = PF14803;PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf07402_354564-360787' '(at1g14860 : 196.0) nudix hydrolase homolog 18 (NUDT18); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 17 (TAIR:AT2G01670.1); Has 1011 Blast hits to 1010 proteins in 304 species: Archae - 0; Bacteria - 339; Metazoa - 213; Fungi - 121; Plants - 237; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (gnl|cdd|38050 : 142.0) no description available & (gnl|cdd|72903 : 115.0) no description available & (reliability: 392.0) & (original description: Putative BnaC02g22250D, Description = BnaC02g22250D protein, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf08370_82687-87519' '(at5g47650 : 340.0) Encodes an ADP-ribose pyrophosphatase that confers enhanced tolerance to oxidative stress.; nudix hydrolase homolog 2 (NUDT2); FUNCTIONS IN: hydrolase activity, ADP-ribose diphosphatase activity, NAD or NADH binding; INVOLVED IN: response to oxidative stress; LOCATED IN: cytosol; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 10 (TAIR:AT4G25434.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35867 : 294.0) no description available & (gnl|cdd|72906 : 178.0) no description available & (reliability: 680.0) & (original description: Putative NUDT2, Description = Nudix hydrolase 2, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf08804_283028-286341' '(at2g01670 : 184.0) nudix hydrolase homolog 17 (NUDT17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 18 (TAIR:AT1G14860.1); Has 1036 Blast hits to 1035 proteins in 308 species: Archae - 0; Bacteria - 361; Metazoa - 217; Fungi - 119; Plants - 237; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|38050 : 141.0) no description available & (gnl|cdd|72903 : 126.0) no description available & (reliability: 368.0) & (original description: Putative NUDT4, Description = Nudix hydrolase-like protein, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf10635_57238-60276' '(at2g01670 : 195.0) nudix hydrolase homolog 17 (NUDT17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 18 (TAIR:AT1G14860.1); Has 1036 Blast hits to 1035 proteins in 308 species: Archae - 0; Bacteria - 361; Metazoa - 217; Fungi - 119; Plants - 237; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|38050 : 148.0) no description available & (gnl|cdd|72903 : 123.0) no description available & (reliability: 390.0) & (original description: Putative NUDT17, Description = Nudix hydrolase 17, mitochondrial, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf11383_249854-252936' '(at5g19460 : 417.0) nudix hydrolase homolog 20 (NUDT20); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 24 (TAIR:AT5G19470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72896 : 222.0) no description available & (gnl|cdd|39514 : 171.0) no description available & (reliability: 834.0) & (original description: Putative NUDT20, Description = Nudix hydrolase 20, chloroplastic, PFAM = PF15916;PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf12431_123393-129090' '(gnl|cdd|35867 : 281.0) no description available & (at5g47650 : 276.0) Encodes an ADP-ribose pyrophosphatase that confers enhanced tolerance to oxidative stress.; nudix hydrolase homolog 2 (NUDT2); FUNCTIONS IN: hydrolase activity, ADP-ribose diphosphatase activity, NAD or NADH binding; INVOLVED IN: response to oxidative stress; LOCATED IN: cytosol; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 10 (TAIR:AT4G25434.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72906 : 171.0) no description available & (reliability: 552.0) & (original description: Putative NUDT7, Description = Nudix hydrolase 7, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf14115_24962-32286' '(at5g47240 : 342.0) nudix hydrolase homolog 8 (NUDT8); FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to wounding; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 2 (TAIR:AT5G47650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35867 : 270.0) no description available & (gnl|cdd|72906 : 157.0) no description available & (reliability: 684.0) & (original description: Putative NUDT8, Description = Nudix hydrolase 8, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf14115_27325-30326' '(at5g47240 : 144.0) nudix hydrolase homolog 8 (NUDT8); FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to wounding; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 2 (TAIR:AT5G47650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35867 : 136.0) no description available & (reliability: 288.0) & (original description: Putative GFG1, Description = Nudix hydrolase 2, PFAM = )' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf16068_21762-26854' '(at1g68760 : 184.0) Encodes a cytosol-localized nudix hydrolase that hydrolyzes 8-oxo-(d)GTP to its monophosphate form. This protective mechanism prevents the misincorporation of these oxidized nucleotides into DNA and RNA. NUDX1 also has a low level of dihydroneopterin triphosphate pyrophosphatase activity in vitro and may participate in the folate synthesis pathway.; nudix hydrolase 1 (NUDX1); FUNCTIONS IN: hydrolase activity, dihydroneopterin triphosphate pyrophosphohydrolase activity, 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity; INVOLVED IN: response to DNA damage stimulus; LOCATED IN: cytosol; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); Has 6319 Blast hits to 6317 proteins in 1575 species: Archae - 191; Bacteria - 5327; Metazoa - 193; Fungi - 66; Plants - 51; Viruses - 14; Other Eukaryotes - 477 (source: NCBI BLink). & (gnl|cdd|72913 : 167.0) no description available & (reliability: 368.0) & (original description: Putative NUDT1, Description = Nudix hydrolase 1, PFAM = PF00293)' T '23.3.3' 'nucleotide metabolism.salvage.NUDIX hydrolases' 'niben101scf16898_173802-180911' '(at1g28960 : 236.0) nudix hydrolase homolog 15 (NUDX15); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086), NUDIX hydrolase, AtNUDT22 (InterPro:IPR017397); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 22 (TAIR:AT2G33980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38279 : 174.0) no description available & (gnl|cdd|72884 : 164.0) no description available & (reliability: 472.0) & (original description: Putative NUDT15, Description = Nudix hydrolase 15, mitochondrial, PFAM = PF00293)' T '23.4' 'nucleotide metabolism.phosphotransfer and pyrophosphatases' '' '' '23.4.1' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase' 'nbv0.3scaffold10256_28659-37953' '(at5g35170 : 800.0) adenylate kinase family protein; FUNCTIONS IN: nucleobase, nucleoside, nucleotide kinase activity, nucleotide kinase activity, adenylate kinase activity, phosphotransferase activity, phosphate group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase, subfamily (InterPro:IPR006259), Domain of unknown function DUF1995 (InterPro:IPR018962), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: adenosine monophosphate kinase (TAIR:AT5G47840.1); Has 15140 Blast hits to 14955 proteins in 5116 species: Archae - 100; Bacteria - 10012; Metazoa - 1330; Fungi - 481; Plants - 477; Viruses - 0; Other Eukaryotes - 2740 (source: NCBI BLink). & (p43188|kadc_maize : 263.0) Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Zea mays (Maize) & (gnl|cdd|30189 : 206.0) no description available & (gnl|cdd|38288 : 197.0) no description available & (reliability: 1600.0) & (original description: Putative adk, Description = Adenylate kinase, PFAM = PF00406;PF09353)' T '23.4.1' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase' 'nbv0.5scaffold1507_159634-171670' '(at2g37250 : 337.0) encodes adenylate kinase that is located in the chloroplast involved in the coordination of metabolism and growth; adenosine kinase (ADK); CONTAINS InterPro DOMAIN/s: Adenylate kinase, subfamily (InterPro:IPR006259), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G39270.1); Has 14783 Blast hits to 14646 proteins in 5115 species: Archae - 103; Bacteria - 9935; Metazoa - 1161; Fungi - 479; Plants - 468; Viruses - 0; Other Eukaryotes - 2637 (source: NCBI BLink). & (q8hsw1|kadc_soltu : 330.0) Adenylate kinase, chloroplast precursor (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Solanum tuberosum (Potato) & (gnl|cdd|30189 : 190.0) no description available & (gnl|cdd|38288 : 187.0) no description available & (reliability: 674.0) & (original description: Putative ADK, Description = Adenylate kinase 1, chloroplastic, PFAM = PF00406)' T '23.4.1' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase' 'niben044scf00059211ctg001_1-6205' '(q08480|kad2_orysa : 417.0) Adenylate kinase B (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Oryza sativa (Rice) & (at5g63400 : 398.0) encodes a protein similar to adenylate kinase.; adenylate kinase 1 (ADK1); FUNCTIONS IN: copper ion binding, adenylate kinase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: Adenylate kinase family protein (TAIR:AT5G50370.1); Has 14853 Blast hits to 14693 proteins in 5114 species: Archae - 98; Bacteria - 9957; Metazoa - 1251; Fungi - 476; Plants - 450; Viruses - 0; Other Eukaryotes - 2621 (source: NCBI BLink). & (gnl|cdd|80603 : 283.0) no description available & (gnl|cdd|38288 : 267.0) no description available & (reliability: 796.0) & (original description: Putative adk, Description = ATP:AMP phosphotransferase, PFAM = PF05191;PF00406)' T '23.4.1' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase' 'niben101scf01905_70540-80766' '(at5g35170 : 802.0) adenylate kinase family protein; FUNCTIONS IN: nucleobase, nucleoside, nucleotide kinase activity, nucleotide kinase activity, adenylate kinase activity, phosphotransferase activity, phosphate group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase, subfamily (InterPro:IPR006259), Domain of unknown function DUF1995 (InterPro:IPR018962), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: adenosine monophosphate kinase (TAIR:AT5G47840.1); Has 15140 Blast hits to 14955 proteins in 5116 species: Archae - 100; Bacteria - 10012; Metazoa - 1330; Fungi - 481; Plants - 477; Viruses - 0; Other Eukaryotes - 2740 (source: NCBI BLink). & (p43188|kadc_maize : 268.0) Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Zea mays (Maize) & (gnl|cdd|80603 : 217.0) no description available & (gnl|cdd|38288 : 200.0) no description available & (reliability: 1604.0) & (original description: Putative adk, Description = Adenylate kinase, PFAM = PF09353;PF00406)' T '23.4.1' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase' 'niben101scf02227_217111-221933' '(q8hsw1|kadc_soltu : 469.0) Adenylate kinase, chloroplast precursor (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Solanum tuberosum (Potato) & (at2g37250 : 388.0) encodes adenylate kinase that is located in the chloroplast involved in the coordination of metabolism and growth; adenosine kinase (ADK); CONTAINS InterPro DOMAIN/s: Adenylate kinase, subfamily (InterPro:IPR006259), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G39270.1); Has 14783 Blast hits to 14646 proteins in 5115 species: Archae - 103; Bacteria - 9935; Metazoa - 1161; Fungi - 479; Plants - 468; Viruses - 0; Other Eukaryotes - 2637 (source: NCBI BLink). & (gnl|cdd|38288 : 199.0) no description available & (gnl|cdd|30189 : 199.0) no description available & (reliability: 776.0) & (original description: Putative ADK, Description = Adenylate kinase, PFAM = PF00406)' T '23.4.1' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase' 'niben101scf04506_313152-322574' '(q08480|kad2_orysa : 384.0) Adenylate kinase B (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Oryza sativa (Rice) & (at5g63400 : 361.0) encodes a protein similar to adenylate kinase.; adenylate kinase 1 (ADK1); FUNCTIONS IN: copper ion binding, adenylate kinase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: Adenylate kinase family protein (TAIR:AT5G50370.1); Has 14853 Blast hits to 14693 proteins in 5114 species: Archae - 98; Bacteria - 9957; Metazoa - 1251; Fungi - 476; Plants - 450; Viruses - 0; Other Eukaryotes - 2621 (source: NCBI BLink). & (gnl|cdd|84753 : 277.0) no description available & (gnl|cdd|38288 : 259.0) no description available & (reliability: 722.0) & (original description: Putative adk4, Description = Adenylate kinase, PFAM = PF05191;PF00406)' T '23.4.1' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase' 'niben101scf05009_615263-627723' '(at2g37250 : 337.0) encodes adenylate kinase that is located in the chloroplast involved in the coordination of metabolism and growth; adenosine kinase (ADK); CONTAINS InterPro DOMAIN/s: Adenylate kinase, subfamily (InterPro:IPR006259), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G39270.1); Has 14783 Blast hits to 14646 proteins in 5115 species: Archae - 103; Bacteria - 9935; Metazoa - 1161; Fungi - 479; Plants - 468; Viruses - 0; Other Eukaryotes - 2637 (source: NCBI BLink). & (q8hsw1|kadc_soltu : 329.0) Adenylate kinase, chloroplast precursor (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Solanum tuberosum (Potato) & (gnl|cdd|30189 : 189.0) no description available & (gnl|cdd|38288 : 187.0) no description available & (reliability: 674.0) & (original description: Putative adk, Description = Adenylate kinase, PFAM = PF00406)' T '23.4.1' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase' 'niben101scf05102_502174-513411' '(at5g47840 : 312.0) adenosine monophosphate kinase (AMK2); FUNCTIONS IN: nucleobase, nucleoside, nucleotide kinase activity, nucleotide kinase activity, ATP binding, adenylate kinase activity, phosphotransferase activity, phosphate group as acceptor; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process, anaerobic respiration, nucleotide metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase, subfamily (InterPro:IPR006259), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: adenylate kinase family protein (TAIR:AT5G35170.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p43188|kadc_maize : 288.0) Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Zea mays (Maize) & (gnl|cdd|84753 : 228.0) no description available & (gnl|cdd|38288 : 222.0) no description available & (reliability: 624.0) & (original description: Putative adk, Description = Adenylate kinase, PFAM = PF00406)' T '23.4.1' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase' 'niben101scf05342_264493-273513' '(q08480|kad2_orysa : 386.0) Adenylate kinase B (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Oryza sativa (Rice) & (at5g63400 : 363.0) encodes a protein similar to adenylate kinase.; adenylate kinase 1 (ADK1); FUNCTIONS IN: copper ion binding, adenylate kinase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: Adenylate kinase family protein (TAIR:AT5G50370.1); Has 14853 Blast hits to 14693 proteins in 5114 species: Archae - 98; Bacteria - 9957; Metazoa - 1251; Fungi - 476; Plants - 450; Viruses - 0; Other Eukaryotes - 2621 (source: NCBI BLink). & (gnl|cdd|84753 : 280.0) no description available & (gnl|cdd|38288 : 262.0) no description available & (reliability: 726.0) & (original description: Putative adk, Description = ATP:AMP phosphotransferase, PFAM = PF00406;PF05191)' T '23.4.1' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase' 'niben101scf07298_1877-8817' '(q8hsw1|kadc_soltu : 476.0) Adenylate kinase, chloroplast precursor (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Solanum tuberosum (Potato) & (at2g37250 : 389.0) encodes adenylate kinase that is located in the chloroplast involved in the coordination of metabolism and growth; adenosine kinase (ADK); CONTAINS InterPro DOMAIN/s: Adenylate kinase, subfamily (InterPro:IPR006259), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G39270.1); Has 14783 Blast hits to 14646 proteins in 5115 species: Archae - 103; Bacteria - 9935; Metazoa - 1161; Fungi - 479; Plants - 468; Viruses - 0; Other Eukaryotes - 2637 (source: NCBI BLink). & (gnl|cdd|38288 : 199.0) no description available & (gnl|cdd|30189 : 198.0) no description available & (reliability: 778.0) & (original description: Putative ADK, Description = Adenylate kinase, PFAM = PF00406)' T '23.4.1' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase' 'niben101scf08621_509952-520228' '(at5g47840 : 310.0) adenosine monophosphate kinase (AMK2); FUNCTIONS IN: nucleobase, nucleoside, nucleotide kinase activity, nucleotide kinase activity, ATP binding, adenylate kinase activity, phosphotransferase activity, phosphate group as acceptor; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process, anaerobic respiration, nucleotide metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase, subfamily (InterPro:IPR006259), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: adenylate kinase family protein (TAIR:AT5G35170.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p43188|kadc_maize : 286.0) Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Zea mays (Maize) & (gnl|cdd|80603 : 231.0) no description available & (gnl|cdd|38288 : 228.0) no description available & (reliability: 620.0) & (original description: Putative adk, Description = Adenylate kinase, PFAM = PF00406)' T '23.4.1' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase' 'niben101scf19230_261376-267337' '(q08480|kad2_orysa : 419.0) Adenylate kinase B (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Oryza sativa (Rice) & (at5g63400 : 394.0) encodes a protein similar to adenylate kinase.; adenylate kinase 1 (ADK1); FUNCTIONS IN: copper ion binding, adenylate kinase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: Adenylate kinase family protein (TAIR:AT5G50370.1); Has 14853 Blast hits to 14693 proteins in 5114 species: Archae - 98; Bacteria - 9957; Metazoa - 1251; Fungi - 476; Plants - 450; Viruses - 0; Other Eukaryotes - 2621 (source: NCBI BLink). & (gnl|cdd|80603 : 282.0) no description available & (gnl|cdd|38288 : 266.0) no description available & (reliability: 788.0) & (original description: Putative adk, Description = Adenylate kinase, PFAM = PF05191;PF00406)' T '23.4.1' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase' 'niben101scf29888_51907-58993' '(q08480|kad2_orysa : 411.0) Adenylate kinase B (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Oryza sativa (Rice) & (at5g63400 : 390.0) encodes a protein similar to adenylate kinase.; adenylate kinase 1 (ADK1); FUNCTIONS IN: copper ion binding, adenylate kinase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: Adenylate kinase family protein (TAIR:AT5G50370.1); Has 14853 Blast hits to 14693 proteins in 5114 species: Archae - 98; Bacteria - 9957; Metazoa - 1251; Fungi - 476; Plants - 450; Viruses - 0; Other Eukaryotes - 2621 (source: NCBI BLink). & (gnl|cdd|80603 : 274.0) no description available & (gnl|cdd|38288 : 258.0) no description available & (reliability: 780.0) & (original description: Putative adk, Description = Adenylate kinase, PFAM = PF00406;PF05191)' T '23.4.2' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.guanylate kinase' 'niben101scf01795_2108834-2111736' '(at3g06200 : 304.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: guanylate kinase activity; INVOLVED IN: purine nucleotide metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Guanylate kinase (InterPro:IPR008144), Guanylate kinase/L-type calcium channel (InterPro:IPR008145), Guanylate kinase, conserved site (InterPro:IPR020590), Guanylate kinase, sub-group (InterPro:IPR017665); BEST Arabidopsis thaliana protein match is: guanylate kinase 1 (TAIR:AT2G41880.1); Has 9322 Blast hits to 9318 proteins in 2721 species: Archae - 1; Bacteria - 5493; Metazoa - 1233; Fungi - 169; Plants - 119; Viruses - 7; Other Eukaryotes - 2300 (source: NCBI BLink). & (gnl|cdd|80613 : 203.0) no description available & (gnl|cdd|35926 : 159.0) no description available & (reliability: 608.0) & (original description: Putative GK3, Description = Guanylate kinase 3, chloroplastic, PFAM = PF00625)' T '23.4.2' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.guanylate kinase' 'niben101scf02904_287586-292983' '(at3g57550 : 457.0) guanylate kinase; guanylate kinase (AGK2); CONTAINS InterPro DOMAIN/s: Guanylate kinase (InterPro:IPR008144), Guanylate kinase/L-type calcium channel (InterPro:IPR008145), Guanylate kinase, conserved site (InterPro:IPR020590), Guanylate kinase, sub-group (InterPro:IPR017665); BEST Arabidopsis thaliana protein match is: guanylate kinase 1 (TAIR:AT2G41880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35926 : 229.0) no description available & (gnl|cdd|80613 : 223.0) no description available & (reliability: 914.0) & (original description: Putative gmkA, Description = Guanylate kinase, PFAM = PF00625)' T '23.4.2' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.guanylate kinase' 'niben101scf03987_234813-240169' '(at3g57550 : 460.0) guanylate kinase; guanylate kinase (AGK2); CONTAINS InterPro DOMAIN/s: Guanylate kinase (InterPro:IPR008144), Guanylate kinase/L-type calcium channel (InterPro:IPR008145), Guanylate kinase, conserved site (InterPro:IPR020590), Guanylate kinase, sub-group (InterPro:IPR017665); BEST Arabidopsis thaliana protein match is: guanylate kinase 1 (TAIR:AT2G41880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35926 : 234.0) no description available & (gnl|cdd|80613 : 232.0) no description available & (reliability: 920.0) & (original description: Putative gmkA, Description = Guanylate kinase, PFAM = PF00625)' T '23.4.3' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.uridylate kinase' 'nbv0.3scaffold18117_25535-35878' '(at5g26667 : 266.0) encodes a uridine 5'-monophosphate (UMP)/cytidine 5'-monophosphate (CMP) kinase.; PYR6; FUNCTIONS IN: uridylate kinase activity, cytidylate kinase activity; INVOLVED IN: pyrimidine ribonucleoside monophosphate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: UMP-CMP kinase (InterPro:IPR006266), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G60180.1); Has 14097 Blast hits to 13900 proteins in 4949 species: Archae - 110; Bacteria - 9093; Metazoa - 1254; Fungi - 484; Plants - 467; Viruses - 0; Other Eukaryotes - 2689 (source: NCBI BLink). & (gnl|cdd|38289 : 237.0) no description available & (gnl|cdd|30189 : 186.0) no description available & (p43188|kadc_maize : 94.0) Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Zea mays (Maize) & (reliability: 532.0) & (original description: Putative UMK3, Description = UMP-CMP kinase 3, PFAM = PF00406)' T '23.4.3' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.uridylate kinase' 'nbv0.3scaffold29261_17807-25680' '(at3g10030 : 540.0) aspartate/glutamate/uridylate kinase family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: cellular amino acid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), MADF domain (InterPro:IPR006578); BEST Arabidopsis thaliana protein match is: Amino acid kinase family protein (TAIR:AT3G18680.1); Has 7571 Blast hits to 7567 proteins in 2653 species: Archae - 55; Bacteria - 5664; Metazoa - 40; Fungi - 3; Plants - 363; Viruses - 0; Other Eukaryotes - 1446 (source: NCBI BLink). & (gnl|cdd|58620 : 308.0) no description available & (reliability: 1080.0) & (original description: Putative pyrH, Description = Uridylate kinase, PFAM = PF00696;PF13837)' T '23.4.3' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.uridylate kinase' 'nbv0.3scaffold101690_1-3832' '(at4g25280 : 167.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleobase, nucleoside, nucleotide kinase activity, nucleotide kinase activity, phosphotransferase activity, phosphate group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UMP-CMP kinase (InterPro:IPR006266), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G26667.3); Has 14028 Blast hits to 13841 proteins in 4915 species: Archae - 98; Bacteria - 9051; Metazoa - 1267; Fungi - 476; Plants - 454; Viruses - 0; Other Eukaryotes - 2682 (source: NCBI BLink). & (gnl|cdd|38289 : 134.0) no description available & (gnl|cdd|84753 : 114.0) no description available & (p43188|kadc_maize : 81.6) Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Zea mays (Maize) & (reliability: 334.0) & (original description: Putative adk, Description = Deoxycytidylate kinase, PFAM = PF00406)' T '23.4.3' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.uridylate kinase' 'nbv0.5scaffold3090_234795-242608' '(at3g10030 : 538.0) aspartate/glutamate/uridylate kinase family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: cellular amino acid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), MADF domain (InterPro:IPR006578); BEST Arabidopsis thaliana protein match is: Amino acid kinase family protein (TAIR:AT3G18680.1); Has 7571 Blast hits to 7567 proteins in 2653 species: Archae - 55; Bacteria - 5664; Metazoa - 40; Fungi - 3; Plants - 363; Viruses - 0; Other Eukaryotes - 1446 (source: NCBI BLink). & (gnl|cdd|58620 : 296.0) no description available & (reliability: 1076.0) & (original description: Putative pyrH, Description = Uridylate kinase, PFAM = PF00696;PF13837)' T '23.4.3' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.uridylate kinase' 'niben044scf00018967ctg009_2653-7233' '(at5g26667 : 325.0) encodes a uridine 5'-monophosphate (UMP)/cytidine 5'-monophosphate (CMP) kinase.; PYR6; FUNCTIONS IN: uridylate kinase activity, cytidylate kinase activity; INVOLVED IN: pyrimidine ribonucleoside monophosphate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: UMP-CMP kinase (InterPro:IPR006266), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G60180.1); Has 14097 Blast hits to 13900 proteins in 4949 species: Archae - 110; Bacteria - 9093; Metazoa - 1254; Fungi - 484; Plants - 467; Viruses - 0; Other Eukaryotes - 2689 (source: NCBI BLink). & (gnl|cdd|38289 : 249.0) no description available & (gnl|cdd|30189 : 188.0) no description available & (p43188|kadc_maize : 95.5) Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Zea mays (Maize) & (reliability: 650.0) & (original description: Putative UMK3, Description = UMP-CMP kinase 3, PFAM = PF00406)' T '23.4.3' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.uridylate kinase' 'niben044scf00055038ctg003_9529-16573' '(at3g10030 : 546.0) aspartate/glutamate/uridylate kinase family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: cellular amino acid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), MADF domain (InterPro:IPR006578); BEST Arabidopsis thaliana protein match is: Amino acid kinase family protein (TAIR:AT3G18680.1); Has 7571 Blast hits to 7567 proteins in 2653 species: Archae - 55; Bacteria - 5664; Metazoa - 40; Fungi - 3; Plants - 363; Viruses - 0; Other Eukaryotes - 1446 (source: NCBI BLink). & (gnl|cdd|58620 : 301.0) no description available & (reliability: 1092.0) & (original description: Putative pyrH, Description = Uridylate kinase, PFAM = PF13837;PF00696)' T '23.4.3' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.uridylate kinase' 'niben101scf00218_391768-397355' '(at5g26667 : 256.0) encodes a uridine 5'-monophosphate (UMP)/cytidine 5'-monophosphate (CMP) kinase.; PYR6; FUNCTIONS IN: uridylate kinase activity, cytidylate kinase activity; INVOLVED IN: pyrimidine ribonucleoside monophosphate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: UMP-CMP kinase (InterPro:IPR006266), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G60180.1); Has 14097 Blast hits to 13900 proteins in 4949 species: Archae - 110; Bacteria - 9093; Metazoa - 1254; Fungi - 484; Plants - 467; Viruses - 0; Other Eukaryotes - 2689 (source: NCBI BLink). & (gnl|cdd|38289 : 233.0) no description available & (gnl|cdd|30189 : 184.0) no description available & (p43188|kadc_maize : 93.6) Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Zea mays (Maize) & (reliability: 512.0) & (original description: Putative pyrk, Description = UMP-CMP kinase, PFAM = PF00406)' T '23.4.3' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.uridylate kinase' 'niben101scf02494_208459-217761' '(at4g25280 : 251.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleobase, nucleoside, nucleotide kinase activity, nucleotide kinase activity, phosphotransferase activity, phosphate group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UMP-CMP kinase (InterPro:IPR006266), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G26667.3); Has 14028 Blast hits to 13841 proteins in 4915 species: Archae - 98; Bacteria - 9051; Metazoa - 1267; Fungi - 476; Plants - 454; Viruses - 0; Other Eukaryotes - 2682 (source: NCBI BLink). & (gnl|cdd|38289 : 213.0) no description available & (gnl|cdd|30189 : 166.0) no description available & (p43188|kadc_maize : 92.8) Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Zea mays (Maize) & (reliability: 502.0) & (original description: Putative adk, Description = Deoxycytidylate kinase, PFAM = PF00406)' T '23.4.3' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.uridylate kinase' 'niben101scf05030_85103-90627' '(at4g25280 : 269.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleobase, nucleoside, nucleotide kinase activity, nucleotide kinase activity, phosphotransferase activity, phosphate group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UMP-CMP kinase (InterPro:IPR006266), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G26667.3); Has 14028 Blast hits to 13841 proteins in 4915 species: Archae - 98; Bacteria - 9051; Metazoa - 1267; Fungi - 476; Plants - 454; Viruses - 0; Other Eukaryotes - 2682 (source: NCBI BLink). & (gnl|cdd|38289 : 224.0) no description available & (gnl|cdd|30189 : 176.0) no description available & (p43188|kadc_maize : 100.0) Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Zea mays (Maize) & (reliability: 538.0) & (original description: Putative adk, Description = Deoxycytidylate kinase, PFAM = PF00406)' T '23.4.3' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.uridylate kinase' 'niben101scf12160_192901-203105' '(at3g18680 : 452.0) Amino acid kinase family protein; FUNCTIONS IN: uridylate kinase activity, UMP kinase activity; INVOLVED IN: cellular amino acid biosynthetic process, pyrimidine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Uridylate kinase, bacteria (InterPro:IPR015963); BEST Arabidopsis thaliana protein match is: aspartate/glutamate/uridylate kinase family protein (TAIR:AT3G10030.1); Has 10647 Blast hits to 10647 proteins in 2814 species: Archae - 356; Bacteria - 8071; Metazoa - 2; Fungi - 40; Plants - 182; Viruses - 0; Other Eukaryotes - 1996 (source: NCBI BLink). & (gnl|cdd|58620 : 390.0) no description available & (reliability: 904.0) & (original description: Putative pyrH, Description = Uridylate kinase, PFAM = PF00696)' T '23.4.4' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.thymidylate kinase' 'nbv0.5scaffold1769_74296-78788' '(at5g59440 : 231.0) Encodes thymidylate kinase which exists in two isoforms in plants. The longer variant of 263 amino acids with a N-terminal extension that is required for localization to the mitochondrion. The second isoform of 224 residues is localized to the cytoplasm and nucleoplasm. Peak of expression occurs during G1/S phase transition.; ZEUS1 (ZEU1); FUNCTIONS IN: thymidylate kinase activity, ATP binding; INVOLVED IN: dTDP biosynthetic process; LOCATED IN: nucleoplasm, mitochondrion, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidylate kinase (InterPro:IPR018094), Thymidylate kinase-like (InterPro:IPR000062), Thymidylate kinase, conserved site (InterPro:IPR018095); Has 5505 Blast hits to 5503 proteins in 2206 species: Archae - 247; Bacteria - 3933; Metazoa - 204; Fungi - 151; Plants - 114; Viruses - 143; Other Eukaryotes - 713 (source: NCBI BLink). & (gnl|cdd|38537 : 214.0) no description available & (gnl|cdd|85916 : 119.0) no description available & (reliability: 462.0) & (original description: Putative ZEU1, Description = Thymidylate kinase, PFAM = PF02223)' T '23.4.4' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.thymidylate kinase' 'niben101scf00159_800399-814802' '(at5g59440 : 282.0) Encodes thymidylate kinase which exists in two isoforms in plants. The longer variant of 263 amino acids with a N-terminal extension that is required for localization to the mitochondrion. The second isoform of 224 residues is localized to the cytoplasm and nucleoplasm. Peak of expression occurs during G1/S phase transition.; ZEUS1 (ZEU1); FUNCTIONS IN: thymidylate kinase activity, ATP binding; INVOLVED IN: dTDP biosynthetic process; LOCATED IN: nucleoplasm, mitochondrion, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidylate kinase (InterPro:IPR018094), Thymidylate kinase-like (InterPro:IPR000062), Thymidylate kinase, conserved site (InterPro:IPR018095); Has 5505 Blast hits to 5503 proteins in 2206 species: Archae - 247; Bacteria - 3933; Metazoa - 204; Fungi - 151; Plants - 114; Viruses - 143; Other Eukaryotes - 713 (source: NCBI BLink). & (gnl|cdd|38537 : 256.0) no description available & (gnl|cdd|85916 : 152.0) no description available & (reliability: 564.0) & (original description: Putative ZEU1, Description = Thymidylate kinase, PFAM = PF02223)' T '23.4.4' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.thymidylate kinase' 'niben101scf01943_1054819-1060296' '(at5g59440 : 285.0) Encodes thymidylate kinase which exists in two isoforms in plants. The longer variant of 263 amino acids with a N-terminal extension that is required for localization to the mitochondrion. The second isoform of 224 residues is localized to the cytoplasm and nucleoplasm. Peak of expression occurs during G1/S phase transition.; ZEUS1 (ZEU1); FUNCTIONS IN: thymidylate kinase activity, ATP binding; INVOLVED IN: dTDP biosynthetic process; LOCATED IN: nucleoplasm, mitochondrion, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidylate kinase (InterPro:IPR018094), Thymidylate kinase-like (InterPro:IPR000062), Thymidylate kinase, conserved site (InterPro:IPR018095); Has 5505 Blast hits to 5503 proteins in 2206 species: Archae - 247; Bacteria - 3933; Metazoa - 204; Fungi - 151; Plants - 114; Viruses - 143; Other Eukaryotes - 713 (source: NCBI BLink). & (gnl|cdd|38537 : 258.0) no description available & (gnl|cdd|85916 : 154.0) no description available & (reliability: 570.0) & (original description: Putative ZEU1, Description = Thymidylate kinase, PFAM = PF02223)' T '23.4.10' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase' 'nbv0.3scaffold34491_8889-12238' '(q56e62|ndk1_tobac : 275.0) Nucleoside diphosphate kinase 1 (EC 2.7.4.6) (Nucleoside diphosphate kinase I) (NDK I) (NDP kinase I) (NDPK I) - Nicotiana tabacum (Common tobacco) & (at4g09320 : 246.0) nucleoside diphosphate kinase type 1 (NDPK1) gene, complete; NDPK1; FUNCTIONS IN: nucleoside diphosphate kinase activity, ATP binding; INVOLVED IN: response to cadmium ion, response to salt stress; LOCATED IN: apoplast, peroxisome, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: nucleoside diphosphate kinase 3 (TAIR:AT4G11010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|79568 : 218.0) no description available & (gnl|cdd|36106 : 182.0) no description available & (reliability: 492.0) & (original description: Putative awd, Description = Nucleoside diphosphate kinase, PFAM = PF00334)' T '23.4.10' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase' 'nbv0.3scaffold86622_1-3875' '(q852s5|ndk2_tobac : 295.0) Nucleoside diphosphate kinase 2, chloroplast precursor (EC 2.7.4.6) (Nucleoside diphosphate kinase II) (NDK II) (NDP kinase II) (NDPK II) - Nicotiana tabacum (Common tobacco) & (at5g63310 : 260.0) Maintains intracellular dNTP levels except ATP. Plays a role in response to oxidative stress and UV. Involved in phytochrome-mediated light signaling. Participates in auxin-regulated processes, partly through the modulation of auxin transport. H-bonding with His-197 inside the nucleotide-binding pocket is critical for NDPK2 functioning.; nucleoside diphosphate kinase 2 (NDPK2); FUNCTIONS IN: nucleoside diphosphate kinase activity, protein binding, ATP binding; INVOLVED IN: response to UV, auxin mediated signaling pathway, response to hydrogen peroxide, red, far-red light phototransduction; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: Nucleoside diphosphate kinase family protein (TAIR:AT4G09320.1); Has 9088 Blast hits to 8922 proteins in 2598 species: Archae - 291; Bacteria - 4641; Metazoa - 1094; Fungi - 170; Plants - 375; Viruses - 117; Other Eukaryotes - 2400 (source: NCBI BLink). & (gnl|cdd|79568 : 228.0) no description available & (gnl|cdd|36106 : 196.0) no description available & (reliability: 520.0) & (original description: Putative ndk, Description = Nucleoside diphosphate kinase, PFAM = PF00334)' T '23.4.10' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase' 'nbv0.5scaffold2618_304019-315343' '(at1g17410 : 207.0) Nucleoside diphosphate kinase family protein; FUNCTIONS IN: nucleoside diphosphate kinase activity, ATP binding; INVOLVED IN: UTP biosynthetic process, GTP biosynthetic process, CTP biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: nucleoside diphosphate kinase 2 (TAIR:AT5G63310.1). & (gnl|cdd|58532 : 170.0) no description available & (gnl|cdd|36106 : 147.0) no description available & (o81372|ndk1_mescr : 93.2) Nucleoside diphosphate kinase 1 (EC 2.7.4.6) (Nucleoside diphosphate kinase I) (NDK I) (NDP kinase I) (NDPK I) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 414.0) & (original description: Putative ndk, Description = Nucleoside diphosphate kinase, PFAM = PF00334)' T '23.4.10' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase' 'niben101scf00324_209635-215048' '(q8rxa8|ndk4_spiol : 363.0) Nucleoside diphosphate kinase 4, chloroplast precursor (EC 2.7.4.6) (Nucleoside diphosphate kinase IV) (NDK IV) (NDP kinase IV) (NDPK IV) (Nucleoside diphosphate kinase III) - Spinacia oleracea (Spinach) & (at4g23900 : 354.0) Nucleoside diphosphate kinase family protein; FUNCTIONS IN: nucleoside diphosphate kinase activity, zinc ion binding, ATP binding; INVOLVED IN: UTP biosynthetic process, GTP biosynthetic process, CTP biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: Pleckstrin homology (PH) domain-containing protein (TAIR:AT4G23895.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|58528 : 222.0) no description available & (gnl|cdd|36106 : 213.0) no description available & (reliability: 708.0) & (original description: Putative NDK4, Description = Nucleoside diphosphate kinase 4, chloroplastic, PFAM = PF00334)' T '23.4.10' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase' 'niben101scf00797_2171216-2178496' '(at1g17410 : 209.0) Nucleoside diphosphate kinase family protein; FUNCTIONS IN: nucleoside diphosphate kinase activity, ATP binding; INVOLVED IN: UTP biosynthetic process, GTP biosynthetic process, CTP biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: nucleoside diphosphate kinase 2 (TAIR:AT5G63310.1). & (gnl|cdd|58532 : 173.0) no description available & (gnl|cdd|36106 : 153.0) no description available & (q852s5|ndk2_tobac : 93.2) Nucleoside diphosphate kinase 2, chloroplast precursor (EC 2.7.4.6) (Nucleoside diphosphate kinase II) (NDK II) (NDP kinase II) (NDPK II) - Nicotiana tabacum (Common tobacco) & (reliability: 418.0) & (original description: Putative ndk, Description = Nucleoside diphosphate kinase, PFAM = PF00334)' T '23.4.10' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase' 'niben101scf02386_262447-267715' '(q9m7p6|ndk_capan : 276.0) Nucleoside diphosphate kinase (EC 2.7.4.6) (NDK) (NDP kinase) - Capsicum annuum (Bell pepper) & (at4g09320 : 249.0) nucleoside diphosphate kinase type 1 (NDPK1) gene, complete; NDPK1; FUNCTIONS IN: nucleoside diphosphate kinase activity, ATP binding; INVOLVED IN: response to cadmium ion, response to salt stress; LOCATED IN: apoplast, peroxisome, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: nucleoside diphosphate kinase 3 (TAIR:AT4G11010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|79568 : 228.0) no description available & (gnl|cdd|36106 : 195.0) no description available & (reliability: 498.0) & (original description: Putative awd, Description = Nucleoside diphosphate kinase, PFAM = PF00334)' T '23.4.10' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase' 'niben101scf02407_446475-449918' '(q56e62|ndk1_tobac : 289.0) Nucleoside diphosphate kinase 1 (EC 2.7.4.6) (Nucleoside diphosphate kinase I) (NDK I) (NDP kinase I) (NDPK I) - Nicotiana tabacum (Common tobacco) & (at4g09320 : 261.0) nucleoside diphosphate kinase type 1 (NDPK1) gene, complete; NDPK1; FUNCTIONS IN: nucleoside diphosphate kinase activity, ATP binding; INVOLVED IN: response to cadmium ion, response to salt stress; LOCATED IN: apoplast, peroxisome, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: nucleoside diphosphate kinase 3 (TAIR:AT4G11010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|79568 : 232.0) no description available & (gnl|cdd|36106 : 198.0) no description available & (reliability: 522.0) & (original description: Putative awd, Description = Nucleoside diphosphate kinase, PFAM = PF00334)' T '23.4.10' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase' 'niben101scf02471_139060-143592' '(q56e62|ndk1_tobac : 263.0) Nucleoside diphosphate kinase 1 (EC 2.7.4.6) (Nucleoside diphosphate kinase I) (NDK I) (NDP kinase I) (NDPK I) - Nicotiana tabacum (Common tobacco) & (at4g09320 : 240.0) nucleoside diphosphate kinase type 1 (NDPK1) gene, complete; NDPK1; FUNCTIONS IN: nucleoside diphosphate kinase activity, ATP binding; INVOLVED IN: response to cadmium ion, response to salt stress; LOCATED IN: apoplast, peroxisome, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: nucleoside diphosphate kinase 3 (TAIR:AT4G11010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|58528 : 230.0) no description available & (gnl|cdd|36106 : 194.0) no description available & (reliability: 480.0) & (original description: Putative awd, Description = Nucleoside diphosphate kinase, PFAM = PF00334)' T '23.4.10' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase' 'niben101scf03850_214616-219503' '(at4g23900 : 347.0) Nucleoside diphosphate kinase family protein; FUNCTIONS IN: nucleoside diphosphate kinase activity, zinc ion binding, ATP binding; INVOLVED IN: UTP biosynthetic process, GTP biosynthetic process, CTP biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: Pleckstrin homology (PH) domain-containing protein (TAIR:AT4G23895.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q8rxa8|ndk4_spiol : 338.0) Nucleoside diphosphate kinase 4, chloroplast precursor (EC 2.7.4.6) (Nucleoside diphosphate kinase IV) (NDK IV) (NDP kinase IV) (NDPK IV) (Nucleoside diphosphate kinase III) - Spinacia oleracea (Spinach) & (gnl|cdd|58528 : 219.0) no description available & (gnl|cdd|36106 : 210.0) no description available & (reliability: 694.0) & (original description: Putative ndk, Description = Nucleoside diphosphate kinase, PFAM = PF00334)' T '23.4.10' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase' 'niben101scf04328_27644-33307' '(q852s5|ndk2_tobac : 358.0) Nucleoside diphosphate kinase 2, chloroplast precursor (EC 2.7.4.6) (Nucleoside diphosphate kinase II) (NDK II) (NDP kinase II) (NDPK II) - Nicotiana tabacum (Common tobacco) & (at5g63310 : 267.0) Maintains intracellular dNTP levels except ATP. Plays a role in response to oxidative stress and UV. Involved in phytochrome-mediated light signaling. Participates in auxin-regulated processes, partly through the modulation of auxin transport. H-bonding with His-197 inside the nucleotide-binding pocket is critical for NDPK2 functioning.; nucleoside diphosphate kinase 2 (NDPK2); FUNCTIONS IN: nucleoside diphosphate kinase activity, protein binding, ATP binding; INVOLVED IN: response to UV, auxin mediated signaling pathway, response to hydrogen peroxide, red, far-red light phototransduction; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: Nucleoside diphosphate kinase family protein (TAIR:AT4G09320.1); Has 9088 Blast hits to 8922 proteins in 2598 species: Archae - 291; Bacteria - 4641; Metazoa - 1094; Fungi - 170; Plants - 375; Viruses - 117; Other Eukaryotes - 2400 (source: NCBI BLink). & (gnl|cdd|79568 : 235.0) no description available & (gnl|cdd|36106 : 195.0) no description available & (reliability: 534.0) & (original description: Putative NDPK2, Description = Nucleoside diphosphate kinase 2, chloroplastic, PFAM = PF00334)' T '23.4.10' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase' 'niben101scf07201_250441-262446' '(q852s5|ndk2_tobac : 333.0) Nucleoside diphosphate kinase 2, chloroplast precursor (EC 2.7.4.6) (Nucleoside diphosphate kinase II) (NDK II) (NDP kinase II) (NDPK II) - Nicotiana tabacum (Common tobacco) & (at5g63310 : 279.0) Maintains intracellular dNTP levels except ATP. Plays a role in response to oxidative stress and UV. Involved in phytochrome-mediated light signaling. Participates in auxin-regulated processes, partly through the modulation of auxin transport. H-bonding with His-197 inside the nucleotide-binding pocket is critical for NDPK2 functioning.; nucleoside diphosphate kinase 2 (NDPK2); FUNCTIONS IN: nucleoside diphosphate kinase activity, protein binding, ATP binding; INVOLVED IN: response to UV, auxin mediated signaling pathway, response to hydrogen peroxide, red, far-red light phototransduction; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: Nucleoside diphosphate kinase family protein (TAIR:AT4G09320.1); Has 9088 Blast hits to 8922 proteins in 2598 species: Archae - 291; Bacteria - 4641; Metazoa - 1094; Fungi - 170; Plants - 375; Viruses - 117; Other Eukaryotes - 2400 (source: NCBI BLink). & (gnl|cdd|79568 : 230.0) no description available & (gnl|cdd|36106 : 193.0) no description available & (reliability: 558.0) & (original description: Putative awd, Description = Nucleoside diphosphate kinase, PFAM = PF00334)' T '23.4.10' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase' 'niben101scf15120_47476-53395' '(q852s5|ndk2_tobac : 380.0) Nucleoside diphosphate kinase 2, chloroplast precursor (EC 2.7.4.6) (Nucleoside diphosphate kinase II) (NDK II) (NDP kinase II) (NDPK II) - Nicotiana tabacum (Common tobacco) & (at5g63310 : 281.0) Maintains intracellular dNTP levels except ATP. Plays a role in response to oxidative stress and UV. Involved in phytochrome-mediated light signaling. Participates in auxin-regulated processes, partly through the modulation of auxin transport. H-bonding with His-197 inside the nucleotide-binding pocket is critical for NDPK2 functioning.; nucleoside diphosphate kinase 2 (NDPK2); FUNCTIONS IN: nucleoside diphosphate kinase activity, protein binding, ATP binding; INVOLVED IN: response to UV, auxin mediated signaling pathway, response to hydrogen peroxide, red, far-red light phototransduction; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: Nucleoside diphosphate kinase family protein (TAIR:AT4G09320.1); Has 9088 Blast hits to 8922 proteins in 2598 species: Archae - 291; Bacteria - 4641; Metazoa - 1094; Fungi - 170; Plants - 375; Viruses - 117; Other Eukaryotes - 2400 (source: NCBI BLink). & (gnl|cdd|79568 : 240.0) no description available & (gnl|cdd|36106 : 198.0) no description available & (reliability: 562.0) & (original description: Putative NDPK2, Description = Nucleoside diphosphate kinase 2, chloroplastic, PFAM = PF00334)' T '23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'nbv0.3scaffold21072_4667-10029' '(o22537|ipyr_orysa : 350.0) Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) - Oryza sativa (Rice) & (at3g53620 : 341.0) Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate.; pyrophosphorylase 4 (PPa4); FUNCTIONS IN: inorganic diphosphatase activity; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162); BEST Arabidopsis thaliana protein match is: pyrophosphorylase 1 (TAIR:AT1G01050.1); Has 5938 Blast hits to 5938 proteins in 1824 species: Archae - 171; Bacteria - 4276; Metazoa - 240; Fungi - 260; Plants - 270; Viruses - 0; Other Eukaryotes - 721 (source: NCBI BLink). & (gnl|cdd|36839 : 260.0) no description available & (gnl|cdd|29533 : 215.0) no description available & (reliability: 682.0) & (original description: Putative IPP, Description = Soluble inorganic pyrophosphatase, PFAM = PF00719)' T '23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'nbv0.5scaffold3294_22637-36352' '(at5g09650 : 454.0) Encodes a protein with inorganic pyrophosphatase activity.; pyrophosphorylase 6 (PPa6); FUNCTIONS IN: inorganic diphosphatase activity, pyrophosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: thylakoid, chloroplast, chloroplast stroma, membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162); BEST Arabidopsis thaliana protein match is: pyrophosphorylase 5 (TAIR:AT4G01480.1); Has 4681 Blast hits to 4677 proteins in 1304 species: Archae - 167; Bacteria - 3164; Metazoa - 258; Fungi - 287; Plants - 274; Viruses - 0; Other Eukaryotes - 531 (source: NCBI BLink). & (q93y52|ipyr1_chlre : 308.0) Soluble inorganic pyrophosphatase 1, chloroplast precursor (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase 1) (PPase 1) - Chlamydomonas reinhardtii & (gnl|cdd|36839 : 304.0) no description available & (gnl|cdd|29533 : 179.0) no description available & (reliability: 908.0) & (original description: Putative PPA6, Description = Soluble inorganic pyrophosphatase 6, chloroplastic, PFAM = PF00719)' T '23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben044scf00010297ctg006_566-5040' '(at3g53620 : 369.0) Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate.; pyrophosphorylase 4 (PPa4); FUNCTIONS IN: inorganic diphosphatase activity; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162); BEST Arabidopsis thaliana protein match is: pyrophosphorylase 1 (TAIR:AT1G01050.1); Has 5938 Blast hits to 5938 proteins in 1824 species: Archae - 171; Bacteria - 4276; Metazoa - 240; Fungi - 260; Plants - 270; Viruses - 0; Other Eukaryotes - 721 (source: NCBI BLink). & (q43187|ipyr_soltu : 342.0) Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) - Solanum tuberosum (Potato) & (gnl|cdd|36839 : 271.0) no description available & (gnl|cdd|29533 : 222.0) no description available & (reliability: 738.0) & (original description: Putative PPA4, Description = Soluble inorganic pyrophosphatase 4, PFAM = PF00719)' T '23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben044scf00013336ctg015_2854-6532' '(at4g29680 : 622.0) Alkaline-phosphatase-like family protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process, nucleotide metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase (InterPro:IPR002591), Alkaline-phosphatase-like, core domain (InterPro:IPR017850); BEST Arabidopsis thaliana protein match is: Alkaline-phosphatase-like family protein (TAIR:AT4G29690.1); Has 2446 Blast hits to 2426 proteins in 629 species: Archae - 13; Bacteria - 1090; Metazoa - 671; Fungi - 207; Plants - 107; Viruses - 6; Other Eukaryotes - 352 (source: NCBI BLink). & (gnl|cdd|37856 : 433.0) no description available & (gnl|cdd|85601 : 310.0) no description available & (reliability: 1244.0) & (original description: Putative ENPP1, Description = Ectonucleotide pyrophosphatase/phosphodiesterase 1 (Predicted), PFAM = PF01663)' T '23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben044scf00043121ctg001_487-8102' '(at1g26640 : 237.0) Amino acid kinase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cellular amino acid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/glutamate/uridylate kinase (InterPro:IPR001048); Has 592 Blast hits to 592 proteins in 236 species: Archae - 208; Bacteria - 227; Metazoa - 7; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|58607 : 118.0) no description available & (reliability: 474.0) & (original description: Putative 288, Description = Amino acid kinase family protein, PFAM = PF00696)' T '23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben101scf00193_1351-12735' '(at1g26640 : 440.0) Amino acid kinase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cellular amino acid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/glutamate/uridylate kinase (InterPro:IPR001048); Has 592 Blast hits to 592 proteins in 236 species: Archae - 208; Bacteria - 227; Metazoa - 7; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|58607 : 222.0) no description available & (reliability: 880.0) & (original description: Putative 288, Description = Putative uncharacterized protein 288, PFAM = PF00696)' T '23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben101scf00297_42565-47700' '(at5g09650 : 445.0) Encodes a protein with inorganic pyrophosphatase activity.; pyrophosphorylase 6 (PPa6); FUNCTIONS IN: inorganic diphosphatase activity, pyrophosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: thylakoid, chloroplast, chloroplast stroma, membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162); BEST Arabidopsis thaliana protein match is: pyrophosphorylase 5 (TAIR:AT4G01480.1); Has 4681 Blast hits to 4677 proteins in 1304 species: Archae - 167; Bacteria - 3164; Metazoa - 258; Fungi - 287; Plants - 274; Viruses - 0; Other Eukaryotes - 531 (source: NCBI BLink). & (gnl|cdd|36839 : 307.0) no description available & (q93y52|ipyr1_chlre : 302.0) Soluble inorganic pyrophosphatase 1, chloroplast precursor (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase 1) (PPase 1) - Chlamydomonas reinhardtii & (gnl|cdd|29533 : 178.0) no description available & (reliability: 890.0) & (original description: Putative PPA6, Description = Soluble inorganic pyrophosphatase 6, chloroplastic, PFAM = PF00719)' T '23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben101scf00582_220468-225847' '(at1g01050 : 350.0) Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate.; pyrophosphorylase 1 (PPa1); FUNCTIONS IN: inorganic diphosphatase activity; INVOLVED IN: phosphate metabolic process, metabolic process; LOCATED IN: nucleus, membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162); BEST Arabidopsis thaliana protein match is: pyrophosphorylase 3 (TAIR:AT2G46860.1); Has 5987 Blast hits to 5987 proteins in 1845 species: Archae - 172; Bacteria - 4313; Metazoa - 247; Fungi - 261; Plants - 270; Viruses - 0; Other Eukaryotes - 724 (source: NCBI BLink). & (q43187|ipyr_soltu : 335.0) Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) - Solanum tuberosum (Potato) & (gnl|cdd|36839 : 260.0) no description available & (gnl|cdd|29533 : 225.0) no description available & (reliability: 700.0) & (original description: Putative ppa, Description = Inorganic pyrophosphatase, PFAM = PF00719)' T '23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben101scf00606_281466-287125' '(o22537|ipyr_orysa : 350.0) Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) - Oryza sativa (Rice) & (at3g53620 : 343.0) Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate.; pyrophosphorylase 4 (PPa4); FUNCTIONS IN: inorganic diphosphatase activity; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162); BEST Arabidopsis thaliana protein match is: pyrophosphorylase 1 (TAIR:AT1G01050.1); Has 5938 Blast hits to 5938 proteins in 1824 species: Archae - 171; Bacteria - 4276; Metazoa - 240; Fungi - 260; Plants - 270; Viruses - 0; Other Eukaryotes - 721 (source: NCBI BLink). & (gnl|cdd|36839 : 262.0) no description available & (gnl|cdd|29533 : 218.0) no description available & (reliability: 686.0) & (original description: Putative IPP, Description = Soluble inorganic pyrophosphatase, PFAM = PF00719)' T '23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben101scf01349_290558-293598' '(gnl|cdd|58616 : 406.0) no description available & (at3g57560 : 395.0) encodes a N-acetylglutamate kinase, involved in arginine biosynthesis; N-acetyl-l-glutamate kinase (NAGK); FUNCTIONS IN: acetylglutamate kinase activity; INVOLVED IN: arginine biosynthetic process via ornithine, arginine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: N-acetylglutamate kinase (InterPro:IPR011148), Glutamate 5-kinase (InterPro:IPR001057), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Acetylglutamate kinase (InterPro:IPR004662); BEST Arabidopsis thaliana protein match is: N-acetyl-l-glutamate synthase 2 (TAIR:AT4G37670.2); Has 9387 Blast hits to 9387 proteins in 2227 species: Archae - 281; Bacteria - 6131; Metazoa - 9; Fungi - 140; Plants - 140; Viruses - 0; Other Eukaryotes - 2686 (source: NCBI BLink). & (gnl|cdd|37647 : 242.0) no description available & (reliability: 790.0) & (original description: Putative NAGK, Description = Acetylglutamate kinase, chloroplastic, PFAM = PF00696)' T '23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben101scf01633_60733-64217' '(at4g29680 : 627.0) Alkaline-phosphatase-like family protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process, nucleotide metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase (InterPro:IPR002591), Alkaline-phosphatase-like, core domain (InterPro:IPR017850); BEST Arabidopsis thaliana protein match is: Alkaline-phosphatase-like family protein (TAIR:AT4G29690.1); Has 2446 Blast hits to 2426 proteins in 629 species: Archae - 13; Bacteria - 1090; Metazoa - 671; Fungi - 207; Plants - 107; Viruses - 6; Other Eukaryotes - 352 (source: NCBI BLink). & (gnl|cdd|37856 : 431.0) no description available & (gnl|cdd|85601 : 308.0) no description available & (reliability: 1254.0) & (original description: Putative ENPP1, Description = Ectonucleotide pyrophosphatase/phosphodiesterase 1 (Predicted), PFAM = PF01663)' T '23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben101scf07036_286618-290367' '(q43187|ipyr_soltu : 376.0) Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) - Solanum tuberosum (Potato) & (at1g01050 : 357.0) Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate.; pyrophosphorylase 1 (PPa1); FUNCTIONS IN: inorganic diphosphatase activity; INVOLVED IN: phosphate metabolic process, metabolic process; LOCATED IN: nucleus, membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162); BEST Arabidopsis thaliana protein match is: pyrophosphorylase 3 (TAIR:AT2G46860.1); Has 5987 Blast hits to 5987 proteins in 1845 species: Archae - 172; Bacteria - 4313; Metazoa - 247; Fungi - 261; Plants - 270; Viruses - 0; Other Eukaryotes - 724 (source: NCBI BLink). & (gnl|cdd|36839 : 272.0) no description available & (gnl|cdd|29533 : 229.0) no description available & (reliability: 714.0) & (original description: Putative PPA1, Description = Soluble inorganic pyrophosphatase PPA1, PFAM = PF00719)' T '23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben101scf07229_47646-51206' '(at4g29680 : 641.0) Alkaline-phosphatase-like family protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process, nucleotide metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase (InterPro:IPR002591), Alkaline-phosphatase-like, core domain (InterPro:IPR017850); BEST Arabidopsis thaliana protein match is: Alkaline-phosphatase-like family protein (TAIR:AT4G29690.1); Has 2446 Blast hits to 2426 proteins in 629 species: Archae - 13; Bacteria - 1090; Metazoa - 671; Fungi - 207; Plants - 107; Viruses - 6; Other Eukaryotes - 352 (source: NCBI BLink). & (gnl|cdd|37856 : 437.0) no description available & (gnl|cdd|85601 : 317.0) no description available & (reliability: 1282.0) & (original description: Putative ENPP1, Description = Ectonucleotide pyrophosphatase/phosphodiesterase 1 (Predicted), PFAM = PF01663)' T '23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben101scf07365_108829-114075' '(at5g09650 : 446.0) Encodes a protein with inorganic pyrophosphatase activity.; pyrophosphorylase 6 (PPa6); FUNCTIONS IN: inorganic diphosphatase activity, pyrophosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: thylakoid, chloroplast, chloroplast stroma, membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162); BEST Arabidopsis thaliana protein match is: pyrophosphorylase 5 (TAIR:AT4G01480.1); Has 4681 Blast hits to 4677 proteins in 1304 species: Archae - 167; Bacteria - 3164; Metazoa - 258; Fungi - 287; Plants - 274; Viruses - 0; Other Eukaryotes - 531 (source: NCBI BLink). & (gnl|cdd|36839 : 307.0) no description available & (q93y52|ipyr1_chlre : 303.0) Soluble inorganic pyrophosphatase 1, chloroplast precursor (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase 1) (PPase 1) - Chlamydomonas reinhardtii & (gnl|cdd|29533 : 179.0) no description available & (reliability: 892.0) & (original description: Putative PPA1, Description = Inorganic pyrophosphatase, PFAM = PF00719)' T '23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben101scf07554_484-5266' '(q43187|ipyr_soltu : 383.0) Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) - Solanum tuberosum (Potato) & (at1g01050 : 372.0) Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate.; pyrophosphorylase 1 (PPa1); FUNCTIONS IN: inorganic diphosphatase activity; INVOLVED IN: phosphate metabolic process, metabolic process; LOCATED IN: nucleus, membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162); BEST Arabidopsis thaliana protein match is: pyrophosphorylase 3 (TAIR:AT2G46860.1); Has 5987 Blast hits to 5987 proteins in 1845 species: Archae - 172; Bacteria - 4313; Metazoa - 247; Fungi - 261; Plants - 270; Viruses - 0; Other Eukaryotes - 724 (source: NCBI BLink). & (gnl|cdd|36839 : 273.0) no description available & (gnl|cdd|29533 : 226.0) no description available & (reliability: 744.0) & (original description: Putative PPA1, Description = Soluble inorganic pyrophosphatase PPA1, PFAM = PF00719)' T '23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'niben101scf15792_103109-106841' '(q43187|ipyr_soltu : 388.0) Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) - Solanum tuberosum (Potato) & (at1g01050 : 368.0) Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate.; pyrophosphorylase 1 (PPa1); FUNCTIONS IN: inorganic diphosphatase activity; INVOLVED IN: phosphate metabolic process, metabolic process; LOCATED IN: nucleus, membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162); BEST Arabidopsis thaliana protein match is: pyrophosphorylase 3 (TAIR:AT2G46860.1); Has 5987 Blast hits to 5987 proteins in 1845 species: Archae - 172; Bacteria - 4313; Metazoa - 247; Fungi - 261; Plants - 270; Viruses - 0; Other Eukaryotes - 724 (source: NCBI BLink). & (gnl|cdd|36839 : 274.0) no description available & (gnl|cdd|29533 : 226.0) no description available & (reliability: 736.0) & (original description: Putative PPA1, Description = Soluble inorganic pyrophosphatase PPA1, PFAM = PF00719)' T '23.5' 'nucleotide metabolism.deoxynucleotide metabolism' '' '' '23.5.1' 'nucleotide metabolism.deoxynucleotide metabolism.dihydrofolate reductase-thymidylate synthase' 'nbv0.5scaffold704_196690-203944' '(p51820|drts_soybn : 848.0) Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) [Includes: Dihydrofolate reductase (EC 1.5.1.3); Thymidylate synthase (EC 2.1.1.45)] - Glycine max (Soybean) & (at2g16370 : 825.0) Encodes a bifunctional dihydrofolate reductase - thymidylate synthase gene. This is unique in Arabidopsis and protozoa. Other organisms have independent genes for this function.; thymidylate synthase 1 (THY-1); CONTAINS InterPro DOMAIN/s: Thymidylate synthase, active site (InterPro:IPR020940), Dihydrofolate reductase domain (InterPro:IPR001796), Dihydrofolate reductase conserved site (InterPro:IPR017925), Bifunctional dihydrofolate reductase/thymidylate synthase (InterPro:IPR012262), Thymidylate synthase (InterPro:IPR000398); BEST Arabidopsis thaliana protein match is: thymidylate synthase 2 (TAIR:AT4G34570.1); Has 13474 Blast hits to 13433 proteins in 2607 species: Archae - 76; Bacteria - 8708; Metazoa - 513; Fungi - 424; Plants - 92; Viruses - 253; Other Eukaryotes - 3408 (source: NCBI BLink). & (gnl|cdd|35892 : 545.0) no description available & (gnl|cdd|84679 : 500.0) no description available & (reliability: 1606.0) & (original description: Putative tyms, Description = Bifunctional dihydrofolate reductase-thymidylate synthase, PFAM = PF00186;PF00303)' T '23.5.1' 'nucleotide metabolism.deoxynucleotide metabolism.dihydrofolate reductase-thymidylate synthase' 'niben101scf00893_178370-183440' '(p45350|drts_dauca : 872.0) Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) [Includes: Dihydrofolate reductase (EC 1.5.1.3); Thymidylate synthase (EC 2.1.1.45)] - Daucus carota (Carrot) & (at2g16370 : 841.0) Encodes a bifunctional dihydrofolate reductase - thymidylate synthase gene. This is unique in Arabidopsis and protozoa. Other organisms have independent genes for this function.; thymidylate synthase 1 (THY-1); CONTAINS InterPro DOMAIN/s: Thymidylate synthase, active site (InterPro:IPR020940), Dihydrofolate reductase domain (InterPro:IPR001796), Dihydrofolate reductase conserved site (InterPro:IPR017925), Bifunctional dihydrofolate reductase/thymidylate synthase (InterPro:IPR012262), Thymidylate synthase (InterPro:IPR000398); BEST Arabidopsis thaliana protein match is: thymidylate synthase 2 (TAIR:AT4G34570.1); Has 13474 Blast hits to 13433 proteins in 2607 species: Archae - 76; Bacteria - 8708; Metazoa - 513; Fungi - 424; Plants - 92; Viruses - 253; Other Eukaryotes - 3408 (source: NCBI BLink). & (gnl|cdd|35892 : 546.0) no description available & (gnl|cdd|84679 : 502.0) no description available & (reliability: 1650.0) & (original description: Putative ts, Description = Bifunctional dihydrofolate reductase-thymidylate synthase, PFAM = PF00303;PF00186)' T '23.5.2' 'nucleotide metabolism.deoxynucleotide metabolism.pseudouridine synthase' 'niben044scf00050083ctg001_5253-13315' '(at5g14460 : 590.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity, transporter activity; INVOLVED IN: pseudouridine synthesis, RNA modification, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase II, TruB, N-terminal, bacterial-type (InterPro:IPR014780), Pseudouridine synthase II, TruB, N-terminal (InterPro:IPR002501); BEST Arabidopsis thaliana protein match is: homologue of NAP57 (TAIR:AT3G57150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30022 : 284.0) no description available & (gnl|cdd|37740 : 152.0) no description available & (reliability: 1180.0) & (original description: Putative truB, Description = tRNA pseudouridine synthase B, PFAM = PF01509;PF16198)' T '23.5.2' 'nucleotide metabolism.deoxynucleotide metabolism.pseudouridine synthase' 'niben101scf00046_442824-451482' '(at5g14460 : 582.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity, transporter activity; INVOLVED IN: pseudouridine synthesis, RNA modification, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase II, TruB, N-terminal, bacterial-type (InterPro:IPR014780), Pseudouridine synthase II, TruB, N-terminal (InterPro:IPR002501); BEST Arabidopsis thaliana protein match is: homologue of NAP57 (TAIR:AT3G57150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30022 : 285.0) no description available & (gnl|cdd|37740 : 157.0) no description available & (reliability: 1164.0) & (original description: Putative truB, Description = tRNA pseudouridine synthase B, PFAM = PF16198;PF01509)' T '23.5.3' 'nucleotide metabolism.deoxynucleotide metabolism.cytosine deaminase' 'nbv0.3scaffold10675_14850-29050' '(at3g47390 : 847.0) Encodes a protein that is believed to function as a pyrimidine reductase involved in riboflavin and FAD biosynthesis. phs1 was identified as a photosensitive mutant that shows reduced growth, chloroplast developmental abnormalities, reduced chlorophyll levels, increased oxidative stress, reduced NADPH/NADP+ ratios, reduced photosystem I electron transport, and reduced photosynthetic protein levels under high light conditions. Many of these abnormal phenotypes likely arise from the reduction in the levels of FAD in the phs1 mutant.; PHOTOSENSITIVE 1 (PHS1); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP02464 (InterPro:IPR012816), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193), Riboflavin-specific deaminase, C-terminal (InterPro:IPR011549), Bacterial bifunctional deaminase-reductase, C-terminal (InterPro:IPR002734), Riboflavin biosynthesis protein RibD (InterPro:IPR004794); BEST Arabidopsis thaliana protein match is: Cytidine/deoxycytidylate deaminase family protein (TAIR:AT4G20960.1). & (gnl|cdd|32168 : 188.0) no description available & (reliability: 1694.0) & (original description: Putative PYRR, Description = Riboflavin biosynthesis protein PYRR, chloroplastic, PFAM = PF08719;PF00383;PF01872)' T '23.5.3' 'nucleotide metabolism.deoxynucleotide metabolism.cytosine deaminase' 'nbv0.5scaffold469_191885-199409' '(at5g24670 : 399.0) Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193). & (gnl|cdd|37982 : 116.0) no description available & (reliability: 798.0) & (original description: Putative adat3, Description = tRNA-specific adenosine deaminase-like protein 3, PFAM = PF00383)' T '23.5.3' 'nucleotide metabolism.deoxynucleotide metabolism.cytosine deaminase' 'nbv0.5scaffold3446_121036-129198' '(at1g48175 : 221.0) embryo defective 2191 (emb2191); FUNCTIONS IN: hydrolase activity, zinc ion binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193); BEST Arabidopsis thaliana protein match is: tRNA arginine adenosine deaminase (TAIR:AT1G68720.1); Has 7475 Blast hits to 7473 proteins in 2425 species: Archae - 62; Bacteria - 5225; Metazoa - 126; Fungi - 224; Plants - 142; Viruses - 0; Other Eukaryotes - 1696 (source: NCBI BLink). & (gnl|cdd|36236 : 126.0) no description available & (gnl|cdd|30935 : 126.0) no description available & (reliability: 442.0) & (original description: Putative DEADC1, Description = tRNA-specific adenosine deaminase 2, PFAM = PF00383)' T '23.5.3' 'nucleotide metabolism.deoxynucleotide metabolism.cytosine deaminase' 'niben101scf00975_133614-140301' '(at1g48175 : 197.0) embryo defective 2191 (emb2191); FUNCTIONS IN: hydrolase activity, zinc ion binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193); BEST Arabidopsis thaliana protein match is: tRNA arginine adenosine deaminase (TAIR:AT1G68720.1); Has 7475 Blast hits to 7473 proteins in 2425 species: Archae - 62; Bacteria - 5225; Metazoa - 126; Fungi - 224; Plants - 142; Viruses - 0; Other Eukaryotes - 1696 (source: NCBI BLink). & (gnl|cdd|36236 : 112.0) no description available & (gnl|cdd|30935 : 103.0) no description available & (reliability: 394.0) & (original description: Putative adat2, Description = tRNA-specific adenosine deaminase 2, PFAM = PF00383)' T '23.5.3' 'nucleotide metabolism.deoxynucleotide metabolism.cytosine deaminase' 'niben101scf01514_431726-447084' '(at3g47390 : 816.0) Encodes a protein that is believed to function as a pyrimidine reductase involved in riboflavin and FAD biosynthesis. phs1 was identified as a photosensitive mutant that shows reduced growth, chloroplast developmental abnormalities, reduced chlorophyll levels, increased oxidative stress, reduced NADPH/NADP+ ratios, reduced photosystem I electron transport, and reduced photosynthetic protein levels under high light conditions. Many of these abnormal phenotypes likely arise from the reduction in the levels of FAD in the phs1 mutant.; PHOTOSENSITIVE 1 (PHS1); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP02464 (InterPro:IPR012816), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193), Riboflavin-specific deaminase, C-terminal (InterPro:IPR011549), Bacterial bifunctional deaminase-reductase, C-terminal (InterPro:IPR002734), Riboflavin biosynthesis protein RibD (InterPro:IPR004794); BEST Arabidopsis thaliana protein match is: Cytidine/deoxycytidylate deaminase family protein (TAIR:AT4G20960.1). & (gnl|cdd|32168 : 188.0) no description available & (reliability: 1632.0) & (original description: Putative PYRR, Description = Riboflavin biosynthesis protein PYRR, chloroplastic, PFAM = PF00383;PF01872;PF08719)' T '23.5.3' 'nucleotide metabolism.deoxynucleotide metabolism.cytosine deaminase' 'niben101scf01968_132142-137615' '(at4g20960 : 395.0) encodes diaminohydroxyphosphoribosylaminopyrimidine deaminase catalyzing the second step in the riboflavin biosynthesis; Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding, diaminohydroxyphosphoribosylaminopyrimidine deaminase activity; INVOLVED IN: riboflavin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193), Riboflavin biosynthesis protein RibD (InterPro:IPR004794); BEST Arabidopsis thaliana protein match is: cytidine/deoxycytidylate deaminase family protein (TAIR:AT3G47390.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30466 : 228.0) no description available & (reliability: 790.0) & (original description: Putative ribD, Description = Riboflavin biosynthesis protein RibD, PFAM = PF00383;PF01872)' T '23.5.3' 'nucleotide metabolism.deoxynucleotide metabolism.cytosine deaminase' 'niben101scf03949_799484-811978' '(at5g24670 : 384.0) Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193). & (gnl|cdd|37982 : 108.0) no description available & (reliability: 768.0) & (original description: Putative adat3, Description = tRNA-specific adenosine deaminase-like protein 3, PFAM = PF00383)' T '23.5.3' 'nucleotide metabolism.deoxynucleotide metabolism.cytosine deaminase' 'niben101scf06154_129726-137276' '(at5g24670 : 392.0) Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193). & (gnl|cdd|37982 : 116.0) no description available & (reliability: 784.0) & (original description: Putative adat3, Description = tRNA-specific adenosine deaminase-like protein 3, PFAM = PF00383)' T '23.5.4' 'nucleotide metabolism.deoxynucleotide metabolism.ribonucleoside-diphosphate reductase' 'niben044scf00059850ctg000_1-2061' '(p49730|rir2_tobac : 667.0) Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase small subunit) (Ribonucleoside-diphosphate reductase R2 subunit) - Nicotiana tabacum (Common tobacco) & (at3g27060 : 562.0) Encodes one of the 3 ribonucleotide reductase (RNR) small subunit genes. TSO2 transcription occurs predominantly at the S-phase of the cell cycle and its expression pattern is consistent with its role in dNDP biosynthesis during DNA replication in actively dividing cells. Critical for cell cycle progression, DNA damage repair and plant development.; TSO MEANING 'UGLY' IN CHINESE 2 (TSO2); FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, ribonucleoside-diphosphate reductase activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ribonucleotide reductase (InterPro:IPR000358), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: ribonucleotide reductase 2A (TAIR:AT3G23580.1); Has 9355 Blast hits to 9350 proteins in 2299 species: Archae - 34; Bacteria - 4270; Metazoa - 263; Fungi - 240; Plants - 185; Viruses - 729; Other Eukaryotes - 3634 (source: NCBI BLink). & (gnl|cdd|36780 : 540.0) no description available & (gnl|cdd|64148 : 365.0) no description available & (reliability: 1124.0) & (original description: Putative nrdB, Description = Ribonucleoside-diphosphate reductase subunit M2, PFAM = PF00268)' T '23.5.4' 'nucleotide metabolism.deoxynucleotide metabolism.ribonucleoside-diphosphate reductase' 'niben101scf00109_1034481-1037036' '(p49730|rir2_tobac : 669.0) Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase small subunit) (Ribonucleoside-diphosphate reductase R2 subunit) - Nicotiana tabacum (Common tobacco) & (at3g27060 : 565.0) Encodes one of the 3 ribonucleotide reductase (RNR) small subunit genes. TSO2 transcription occurs predominantly at the S-phase of the cell cycle and its expression pattern is consistent with its role in dNDP biosynthesis during DNA replication in actively dividing cells. Critical for cell cycle progression, DNA damage repair and plant development.; TSO MEANING 'UGLY' IN CHINESE 2 (TSO2); FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, ribonucleoside-diphosphate reductase activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ribonucleotide reductase (InterPro:IPR000358), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: ribonucleotide reductase 2A (TAIR:AT3G23580.1); Has 9355 Blast hits to 9350 proteins in 2299 species: Archae - 34; Bacteria - 4270; Metazoa - 263; Fungi - 240; Plants - 185; Viruses - 729; Other Eukaryotes - 3634 (source: NCBI BLink). & (gnl|cdd|36780 : 540.0) no description available & (gnl|cdd|64148 : 364.0) no description available & (reliability: 1130.0) & (original description: Putative nrdB, Description = Ribonucleoside-diphosphate reductase subunit M2, PFAM = PF00268)' T '23.5.4' 'nucleotide metabolism.deoxynucleotide metabolism.ribonucleoside-diphosphate reductase' 'niben101scf02242_134826-143866' '(at2g21790 : 1466.0) encodes large subunit of ribonucleotide reductase involved in the production of deoxyribonucleoside triphosphates (dNTPs) for DNA replication and repair; ribonucleotide reductase 1 (RNR1); FUNCTIONS IN: ribonucleoside-diphosphate reductase activity, ATP binding; INVOLVED IN: response to cadmium ion, DNA replication, deoxyribonucleoside triphosphate biosynthetic process; LOCATED IN: ribonucleoside-diphosphate reductase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase large subunit, N-terminal (InterPro:IPR013509), Ribonucleoside-diphosphate reductase, alpha subunit (InterPro:IPR013346), ATP-cone (InterPro:IPR005144), Ribonucleotide reductase large subunit, C-terminal (InterPro:IPR000788), Ribonucleotide reductase R1 subunit, N-terminal (InterPro:IPR008926); Has 15326 Blast hits to 14804 proteins in 2790 species: Archae - 206; Bacteria - 6388; Metazoa - 177; Fungi - 215; Plants - 88; Viruses - 606; Other Eukaryotes - 7646 (source: NCBI BLink). & (gnl|cdd|36328 : 1427.0) no description available & (gnl|cdd|86154 : 755.0) no description available & (reliability: 2932.0) & (original description: Putative RNR1, Description = Ribonucleoside-diphosphate reductase large subunit, PFAM = PF00317;PF03477;PF02867)' T '23.5.4' 'nucleotide metabolism.deoxynucleotide metabolism.ribonucleoside-diphosphate reductase' 'niben101scf10438_147793-155174' '(at2g21790 : 1442.0) encodes large subunit of ribonucleotide reductase involved in the production of deoxyribonucleoside triphosphates (dNTPs) for DNA replication and repair; ribonucleotide reductase 1 (RNR1); FUNCTIONS IN: ribonucleoside-diphosphate reductase activity, ATP binding; INVOLVED IN: response to cadmium ion, DNA replication, deoxyribonucleoside triphosphate biosynthetic process; LOCATED IN: ribonucleoside-diphosphate reductase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase large subunit, N-terminal (InterPro:IPR013509), Ribonucleoside-diphosphate reductase, alpha subunit (InterPro:IPR013346), ATP-cone (InterPro:IPR005144), Ribonucleotide reductase large subunit, C-terminal (InterPro:IPR000788), Ribonucleotide reductase R1 subunit, N-terminal (InterPro:IPR008926); Has 15326 Blast hits to 14804 proteins in 2790 species: Archae - 206; Bacteria - 6388; Metazoa - 177; Fungi - 215; Plants - 88; Viruses - 606; Other Eukaryotes - 7646 (source: NCBI BLink). & (gnl|cdd|36328 : 1427.0) no description available & (gnl|cdd|86154 : 764.0) no description available & (reliability: 2884.0) & (original description: Putative RNR1, Description = Ribonucleoside-diphosphate reductase large subunit, PFAM = PF03477;PF00317;PF02867)' T '23.5.5' 'nucleotide metabolism.deoxynucleotide metabolism.dUTP diphosphatase' 'niben101scf00369_2157356-2160201' '(at3g46940 : 244.0) DUTP-PYROPHOSPHATASE-LIKE 1 (DUT1); FUNCTIONS IN: hydrolase activity, dUTP diphosphatase activity; INVOLVED IN: DNA repair, 2'-deoxyribonucleotide metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DeoxyUTP pyrophosphatase domain, subfamily 1, (InterPro:IPR008181), DeoxyUTP pyrophosphatase domain (InterPro:IPR008180); Has 7764 Blast hits to 7750 proteins in 2463 species: Archae - 14; Bacteria - 4311; Metazoa - 248; Fungi - 161; Plants - 56; Viruses - 831; Other Eukaryotes - 2143 (source: NCBI BLink). & (gnl|cdd|38580 : 194.0) no description available & (gnl|cdd|31099 : 159.0) no description available & (reliability: 488.0) & (original description: Putative dut, Description = Deoxyuridine 5'-triphosphate nucleotidohydrolase, PFAM = PF00692)' T '23.5.5' 'nucleotide metabolism.deoxynucleotide metabolism.dUTP diphosphatase' 'niben101scf00652_175962-178817' '(at3g46940 : 239.0) DUTP-PYROPHOSPHATASE-LIKE 1 (DUT1); FUNCTIONS IN: hydrolase activity, dUTP diphosphatase activity; INVOLVED IN: DNA repair, 2'-deoxyribonucleotide metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DeoxyUTP pyrophosphatase domain, subfamily 1, (InterPro:IPR008181), DeoxyUTP pyrophosphatase domain (InterPro:IPR008180); Has 7764 Blast hits to 7750 proteins in 2463 species: Archae - 14; Bacteria - 4311; Metazoa - 248; Fungi - 161; Plants - 56; Viruses - 831; Other Eukaryotes - 2143 (source: NCBI BLink). & (gnl|cdd|38580 : 189.0) no description available & (gnl|cdd|31099 : 154.0) no description available & (reliability: 478.0) & (original description: Putative dut, Description = Deoxyuridine 5'-triphosphate nucleotidohydrolase, PFAM = PF00692)' T '23.5.5' 'nucleotide metabolism.deoxynucleotide metabolism.dUTP diphosphatase' 'niben101scf11383_2304-5662' '(at3g46940 : 239.0) DUTP-PYROPHOSPHATASE-LIKE 1 (DUT1); FUNCTIONS IN: hydrolase activity, dUTP diphosphatase activity; INVOLVED IN: DNA repair, 2'-deoxyribonucleotide metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DeoxyUTP pyrophosphatase domain, subfamily 1, (InterPro:IPR008181), DeoxyUTP pyrophosphatase domain (InterPro:IPR008180); Has 7764 Blast hits to 7750 proteins in 2463 species: Archae - 14; Bacteria - 4311; Metazoa - 248; Fungi - 161; Plants - 56; Viruses - 831; Other Eukaryotes - 2143 (source: NCBI BLink). & (gnl|cdd|38580 : 196.0) no description available & (gnl|cdd|31099 : 159.0) no description available & (reliability: 478.0) & (original description: Putative dut, Description = Deoxyuridine 5'-triphosphate nucleotidohydrolase, PFAM = PF00692)' T '23.5.6' 'nucleotide metabolism.deoxynucleotide metabolism.uridylyl transferase' '' '' '23.6' 'nucleotide metabolism.signalling' '' '' '24' 'Biodegradation of Xenobiotics' 'nbv0.3scaffold323_26430-30082' '(at1g75620 : 652.0) glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT1G19900.1); Has 839 Blast hits to 834 proteins in 169 species: Archae - 0; Bacteria - 315; Metazoa - 0; Fungi - 239; Plants - 267; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|70706 : 368.0) no description available & (reliability: 1304.0) & (original description: Putative GLOX1, Description = Aldehyde oxidase GLOX1, PFAM = PF09118;PF07250)' T '24' 'Biodegradation of Xenobiotics' 'nbv0.3scaffold10282_26968-30638' '(at1g75620 : 642.0) glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT1G19900.1); Has 839 Blast hits to 834 proteins in 169 species: Archae - 0; Bacteria - 315; Metazoa - 0; Fungi - 239; Plants - 267; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|70706 : 365.0) no description available & (reliability: 1284.0) & (original description: Putative BnaC09g38100D, Description = BnaC09g38100D protein, PFAM = PF09118;PF07250)' T '24' 'Biodegradation of Xenobiotics' 'nbv0.3scaffold15883_10663-14402' '(at1g14430 : 610.0) glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT3G57620.1); Has 1265 Blast hits to 1255 proteins in 183 species: Archae - 0; Bacteria - 321; Metazoa - 2; Fungi - 244; Plants - 682; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|70706 : 336.0) no description available & (reliability: 1220.0) & (original description: Putative BnaC08g39640D, Description = BnaC08g39640D protein, PFAM = PF07250;PF09118)' T '24' 'Biodegradation of Xenobiotics' 'nbv0.3scaffold39534_88-3092' '(gnl|cdd|36728 : 218.0) no description available & (at5g16080 : 193.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 174.0) no description available & (q6l545|gid1_orysa : 125.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 386.0) & (original description: Putative hsr203J, Description = Cell death associated protein, PFAM = PF07859)' T '24' 'Biodegradation of Xenobiotics' 'nbv0.5scaffold25_30947-33977' '(gnl|cdd|36728 : 220.0) no description available & (at5g16080 : 191.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 181.0) no description available & (q6l545|gid1_orysa : 124.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 382.0) & (original description: Putative cda1, Description = Cell death-associated protein 1, PFAM = PF07859)' T '24' 'Biodegradation of Xenobiotics' 'nbv0.5scaffold2418_297477-318437' '(gnl|cdd|36728 : 236.0) no description available & (at5g16080 : 206.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 173.0) no description available & (q6l545|gid1_orysa : 118.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 412.0) & (original description: Putative CXE2, Description = CXE carboxylesterase, PFAM = PF07859)' T '24' 'Biodegradation of Xenobiotics' 'niben044scf00000729ctg007_6777-9781' '(gnl|cdd|36728 : 224.0) no description available & (at5g16080 : 190.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 180.0) no description available & (q6l545|gid1_orysa : 124.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 380.0) & (original description: Putative hsr203J, Description = HSR203J, PFAM = PF07859)' T '24' 'Biodegradation of Xenobiotics' 'niben044scf00003177ctg004_72011-76411' '(at1g14430 : 621.0) glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT3G57620.1); Has 1265 Blast hits to 1255 proteins in 183 species: Archae - 0; Bacteria - 321; Metazoa - 2; Fungi - 244; Plants - 682; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|70706 : 351.0) no description available & (reliability: 1242.0) & (original description: Putative BnaC08g39640D, Description = BnaC08g39640D protein, PFAM = PF09118;PF07250)' T '24' 'Biodegradation of Xenobiotics' 'niben044scf00009749ctg004_1460-5165' '(at1g75620 : 681.0) glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT1G19900.1); Has 839 Blast hits to 834 proteins in 169 species: Archae - 0; Bacteria - 315; Metazoa - 0; Fungi - 239; Plants - 267; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|70706 : 368.0) no description available & (reliability: 1362.0) & (original description: Putative GLOX1, Description = Aldehyde oxidase GLOX1, PFAM = PF07250;PF09118)' T '24' 'Biodegradation of Xenobiotics' 'niben044scf00031166ctg003_1534-5056' '(gnl|cdd|36728 : 224.0) no description available & (at5g16080 : 194.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 179.0) no description available & (q6l545|gid1_orysa : 129.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 388.0) & (original description: Putative cda1, Description = Cell death-associated protein 1, PFAM = PF07859)' T '24' 'Biodegradation of Xenobiotics' 'niben044scf00035020ctg007_5403-8956' '(at1g75620 : 631.0) glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT1G19900.1); Has 839 Blast hits to 834 proteins in 169 species: Archae - 0; Bacteria - 315; Metazoa - 0; Fungi - 239; Plants - 267; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|70706 : 365.0) no description available & (reliability: 1262.0) & (original description: Putative GLOX1, Description = Aldehyde oxidase GLOX1, PFAM = PF07250;PF09118)' T '24' 'Biodegradation of Xenobiotics' 'niben101scf00577_88450-93705' '(at1g68620 : 357.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 17 (TAIR:AT5G16080.1); Has 11100 Blast hits to 11083 proteins in 1670 species: Archae - 110; Bacteria - 6437; Metazoa - 919; Fungi - 1098; Plants - 1346; Viruses - 3; Other Eukaryotes - 1187 (source: NCBI BLink). & (gnl|cdd|36728 : 267.0) no description available & (gnl|cdd|87389 : 193.0) no description available & (q6l545|gid1_orysa : 139.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 656.0) & (original description: Putative CXE6, Description = Probable carboxylesterase 6, PFAM = PF07859)' T '24' 'Biodegradation of Xenobiotics' 'niben101scf01205_371545-375341' '(at1g75620 : 661.0) glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT1G19900.1); Has 839 Blast hits to 834 proteins in 169 species: Archae - 0; Bacteria - 315; Metazoa - 0; Fungi - 239; Plants - 267; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|70706 : 368.0) no description available & (reliability: 1322.0) & (original description: Putative GLOX1, Description = Aldehyde oxidase GLOX1, PFAM = PF09118;PF07250)' T '24' 'Biodegradation of Xenobiotics' 'niben101scf01205_392782-396452' '(at1g75620 : 642.0) glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT1G19900.1); Has 839 Blast hits to 834 proteins in 169 species: Archae - 0; Bacteria - 315; Metazoa - 0; Fungi - 239; Plants - 267; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|70706 : 366.0) no description available & (reliability: 1284.0) & (original description: Putative GLOX, Description = Galactose oxidase, PFAM = PF07250;PF09118)' T '24' 'Biodegradation of Xenobiotics' 'niben101scf01205_552960-556621' '(at1g19900 : 681.0) glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT1G75620.1); Has 833 Blast hits to 830 proteins in 167 species: Archae - 0; Bacteria - 311; Metazoa - 0; Fungi - 239; Plants - 262; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|70706 : 369.0) no description available & (reliability: 1362.0) & (original description: Putative GLX1, Description = Glyoxal oxidase 1, PFAM = PF09118;PF07250)' T '24' 'Biodegradation of Xenobiotics' 'niben101scf01409_475068-478747' '(at3g57620 : 647.0) glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin-like fold (InterPro:IPR013783), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT1G14430.1); Has 876 Blast hits to 857 proteins in 171 species: Archae - 0; Bacteria - 347; Metazoa - 2; Fungi - 241; Plants - 265; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|70706 : 357.0) no description available & (reliability: 1294.0) & (original description: Putative BnaCnng11720D, Description = BnaCnng11720D protein, PFAM = PF09118;PF07250)' T '24' 'Biodegradation of Xenobiotics' 'niben101scf01537_342320-346488' '(at1g14430 : 622.0) glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT3G57620.1); Has 1265 Blast hits to 1255 proteins in 183 species: Archae - 0; Bacteria - 321; Metazoa - 2; Fungi - 244; Plants - 682; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|70706 : 358.0) no description available & (reliability: 1244.0) & (original description: Putative GLOX, Description = Aldehyde oxidase GLOX, PFAM = PF09118;PF07250)' T '24' 'Biodegradation of Xenobiotics' 'niben101scf02408_402906-405853' '(at1g47480 : 298.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 8596 Blast hits to 8578 proteins in 1414 species: Archae - 104; Bacteria - 4918; Metazoa - 486; Fungi - 808; Plants - 1365; Viruses - 3; Other Eukaryotes - 912 (source: NCBI BLink). & (gnl|cdd|36728 : 289.0) no description available & (gnl|cdd|87389 : 148.0) no description available & (q6l545|gid1_orysa : 134.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 564.0) & (original description: Putative HIDM, Description = 2-hydroxyisoflavanone dehydratase, PFAM = PF07859)' T '24' 'Biodegradation of Xenobiotics' 'niben101scf02408_424427-427757' '(gnl|cdd|36728 : 260.0) no description available & (at3g48690 : 252.0) Encodes a protein with carboxylesterase whose activity was tested using both pNA and 2,4-D-methyl.; CXE12; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: response to salt stress; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 9324 Blast hits to 9298 proteins in 1467 species: Archae - 108; Bacteria - 5259; Metazoa - 789; Fungi - 845; Plants - 1410; Viruses - 3; Other Eukaryotes - 910 (source: NCBI BLink). & (gnl|cdd|87389 : 166.0) no description available & (q6l545|gid1_orysa : 114.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 504.0) & (original description: Putative CXE13, Description = Probable carboxylesterase 13, PFAM = PF07859)' T '24' 'Biodegradation of Xenobiotics' 'niben101scf02408_482118-485176' '(gnl|cdd|36728 : 260.0) no description available & (at1g19190 : 237.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G03550.1); Has 9471 Blast hits to 9453 proteins in 1548 species: Archae - 114; Bacteria - 5498; Metazoa - 707; Fungi - 823; Plants - 1388; Viruses - 3; Other Eukaryotes - 938 (source: NCBI BLink). & (gnl|cdd|87389 : 165.0) no description available & (q6l545|gid1_orysa : 117.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 430.0) & (original description: Putative CXE1, Description = CXE carboxylesterase, PFAM = PF07859)' T '24' 'Biodegradation of Xenobiotics' 'niben101scf03016_47943-55285' '(at2g03550 : 238.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 9970 Blast hits to 9948 proteins in 1554 species: Archae - 115; Bacteria - 5525; Metazoa - 1072; Fungi - 910; Plants - 1367; Viruses - 5; Other Eukaryotes - 976 (source: NCBI BLink). & (gnl|cdd|36728 : 224.0) no description available & (gnl|cdd|87389 : 140.0) no description available & (q6l545|gid1_orysa : 87.4) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 434.0) & (original description: Putative ASH1, Description = Acylsugar acylhydrolase 1, PFAM = PF07859)' T '24' 'Biodegradation of Xenobiotics' 'niben101scf03128_163659-167317' '(at1g75620 : 709.0) glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT1G19900.1); Has 839 Blast hits to 834 proteins in 169 species: Archae - 0; Bacteria - 315; Metazoa - 0; Fungi - 239; Plants - 267; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|70706 : 380.0) no description available & (reliability: 1418.0) & (original description: Putative GLOX, Description = Aldehyde oxidase GLOX, PFAM = PF09118;PF07250)' T '24' 'Biodegradation of Xenobiotics' 'niben101scf03565_558165-566292' '(at5g23530 : 399.0) carboxyesterase 18 (CXE18); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G27320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36728 : 278.0) no description available & (gnl|cdd|87389 : 196.0) no description available & (q6l545|gid1_orysa : 194.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 798.0) & (original description: Putative CXE18, Description = Probable carboxylesterase 18, PFAM = PF07859)' T '24' 'Biodegradation of Xenobiotics' 'niben101scf03832_279487-282054' '(gnl|cdd|36728 : 237.0) no description available & (at5g16080 : 209.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 179.0) no description available & (q6l545|gid1_orysa : 119.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 418.0) & (original description: Putative CXE2, Description = CXE carboxylesterase, PFAM = PF07859)' T '24' 'Biodegradation of Xenobiotics' 'niben101scf04956_115034-117975' '(at2g03550 : 292.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 9970 Blast hits to 9948 proteins in 1554 species: Archae - 115; Bacteria - 5525; Metazoa - 1072; Fungi - 910; Plants - 1367; Viruses - 5; Other Eukaryotes - 976 (source: NCBI BLink). & (gnl|cdd|36728 : 287.0) no description available & (gnl|cdd|87389 : 150.0) no description available & (q6l545|gid1_orysa : 126.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 562.0) & (original description: Putative CXE7, Description = Probable carboxylesterase 7, PFAM = PF07859)' T '24' 'Biodegradation of Xenobiotics' 'niben101scf05283_75787-78791' '(gnl|cdd|36728 : 214.0) no description available & (at5g16080 : 189.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87389 : 175.0) no description available & (q6l545|gid1_orysa : 120.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 378.0) & (original description: Putative hsr203J, Description = Cell death associated protein, PFAM = PF07859)' T '24' 'Biodegradation of Xenobiotics' 'niben101scf05830_339831-342793' '(at2g03550 : 225.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 9970 Blast hits to 9948 proteins in 1554 species: Archae - 115; Bacteria - 5525; Metazoa - 1072; Fungi - 910; Plants - 1367; Viruses - 5; Other Eukaryotes - 976 (source: NCBI BLink). & (gnl|cdd|36728 : 221.0) no description available & (gnl|cdd|87389 : 146.0) no description available & (q6l545|gid1_orysa : 89.7) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 432.0) & (original description: Putative HIDM, Description = 2-hydroxyisoflavanone dehydratase, PFAM = PF07859)' T '24' 'Biodegradation of Xenobiotics' 'niben101scf08127_434121-437077' '(gnl|cdd|36728 : 219.0) no description available & (at3g48690 : 217.0) Encodes a protein with carboxylesterase whose activity was tested using both pNA and 2,4-D-methyl.; CXE12; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: response to salt stress; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 9324 Blast hits to 9298 proteins in 1467 species: Archae - 108; Bacteria - 5259; Metazoa - 789; Fungi - 845; Plants - 1410; Viruses - 3; Other Eukaryotes - 910 (source: NCBI BLink). & (gnl|cdd|87389 : 119.0) no description available & (q6l545|gid1_orysa : 89.7) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 434.0) & (original description: Putative HIDH, Description = 2-hydroxyisoflavanone dehydratase, PFAM = PF07859)' T '24' 'Biodegradation of Xenobiotics' 'niben101scf09372_337736-340758' '(at5g16080 : 363.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36728 : 279.0) no description available & (gnl|cdd|87389 : 190.0) no description available & (q6l545|gid1_orysa : 127.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 726.0) & (original description: Putative CXE17, Description = Probable carboxylesterase 17, PFAM = PF07859)' T '24' 'Biodegradation of Xenobiotics' 'niben101scf12148_18213-38900' '(at5g23530 : 398.0) carboxyesterase 18 (CXE18); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G27320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36728 : 270.0) no description available & (q6l545|gid1_orysa : 197.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (gnl|cdd|87389 : 191.0) no description available & (reliability: 796.0) & (original description: Putative CXE18, Description = Probable carboxylesterase 18, PFAM = PF07859)' T '24' 'Biodegradation of Xenobiotics' 'niben101scf13545_62541-66148' '(at3g53950 : 757.0) glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT1G75620.1); Has 849 Blast hits to 839 proteins in 169 species: Archae - 0; Bacteria - 325; Metazoa - 1; Fungi - 246; Plants - 262; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|70706 : 333.0) no description available & (reliability: 1514.0) & (original description: Putative GLOX, Description = Aldehyde oxidase GLOX, PFAM = PF09118;PF07250)' T '24.1' 'Biodegradation of Xenobiotics.hydroxyacylglutathione hydrolase' 'nbv0.5scaffold1096_316153-332866' '(at3g10850 : 399.0) glyoxalase II cytoplasmic isozyme (Glx2-2) mRNA, complete; GLY2; FUNCTIONS IN: hydroxyacylglutathione hydrolase activity; INVOLVED IN: methylglyoxal catabolic process to D-lactate; LOCATED IN: endomembrane system, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279), Hydroxyacylglutathione hydrolase (InterPro:IPR017782); BEST Arabidopsis thaliana protein match is: glyoxalase 2-4 (TAIR:AT1G06130.2); Has 13211 Blast hits to 13207 proteins in 2289 species: Archae - 256; Bacteria - 8297; Metazoa - 430; Fungi - 311; Plants - 206; Viruses - 0; Other Eukaryotes - 3711 (source: NCBI BLink). & (gnl|cdd|36031 : 236.0) no description available & (gnl|cdd|77675 : 143.0) no description available & (reliability: 798.0) & (original description: Putative hagh, Description = Hydroxyacylglutathione hydrolase, mitochondrial, PFAM = PF16123)' T '24.1' 'Biodegradation of Xenobiotics.hydroxyacylglutathione hydrolase' 'niben044scf00001379ctg006_1891-8960' '(at3g10850 : 314.0) glyoxalase II cytoplasmic isozyme (Glx2-2) mRNA, complete; GLY2; FUNCTIONS IN: hydroxyacylglutathione hydrolase activity; INVOLVED IN: methylglyoxal catabolic process to D-lactate; LOCATED IN: endomembrane system, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279), Hydroxyacylglutathione hydrolase (InterPro:IPR017782); BEST Arabidopsis thaliana protein match is: glyoxalase 2-4 (TAIR:AT1G06130.2); Has 13211 Blast hits to 13207 proteins in 2289 species: Archae - 256; Bacteria - 8297; Metazoa - 430; Fungi - 311; Plants - 206; Viruses - 0; Other Eukaryotes - 3711 (source: NCBI BLink). & (gnl|cdd|36031 : 199.0) no description available & (gnl|cdd|77675 : 117.0) no description available & (reliability: 628.0) & (original description: Putative gloB, Description = Hydroxyacylglutathione hydrolase, mitochondrial, PFAM = PF16123)' T '24.1' 'Biodegradation of Xenobiotics.hydroxyacylglutathione hydrolase' 'niben044scf00011949ctg000_5130-11424' '(at1g53580 : 396.0) Mononuclear Fe(II)-containing member of the b-lactamase fold superfamily. ETHE1 is homodimeric in solution, exhibits low-level esterase activity, and specifically binds a single Fe(II) atom in the active site.; glyoxalase II 3 (GLY3); FUNCTIONS IN: hydrolase activity, acting on ester bonds, hydroxyacylglutathione hydrolase activity; INVOLVED IN: response to salt stress, methylglyoxal catabolic process to D-lactate; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: Metallo-hydrolase/oxidoreductase superfamily protein (TAIR:AT3G10850.1); Has 13580 Blast hits to 13577 proteins in 2470 species: Archae - 281; Bacteria - 8959; Metazoa - 398; Fungi - 229; Plants - 189; Viruses - 0; Other Eukaryotes - 3524 (source: NCBI BLink). & (gnl|cdd|36032 : 358.0) no description available & (gnl|cdd|30837 : 101.0) no description available & (reliability: 792.0) & (original description: Putative blh, Description = Zn-dependent hydrolase, PFAM = PF00753)' T '24.1' 'Biodegradation of Xenobiotics.hydroxyacylglutathione hydrolase' 'niben044scf00024807ctg006_1-4492' '(at1g06130 : 308.0) glyoxalase 2-4 (GLX2-4); FUNCTIONS IN: hydrolase activity, hydroxyacylglutathione hydrolase activity, zinc ion binding; INVOLVED IN: methylglyoxal catabolic process to D-lactate; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279), Hydroxyacylglutathione hydrolase (InterPro:IPR017782); BEST Arabidopsis thaliana protein match is: glyoxalase 2-5 (TAIR:AT2G31350.2); Has 15453 Blast hits to 15452 proteins in 2500 species: Archae - 395; Bacteria - 9967; Metazoa - 477; Fungi - 329; Plants - 213; Viruses - 0; Other Eukaryotes - 4072 (source: NCBI BLink). & (gnl|cdd|36031 : 213.0) no description available & (gnl|cdd|77675 : 145.0) no description available & (reliability: 616.0) & (original description: Putative gloB, Description = Glyoxalase II, PFAM = PF16123;PF00753)' T '24.1' 'Biodegradation of Xenobiotics.hydroxyacylglutathione hydrolase' 'niben044scf00031611ctg001_2080-8281' '(at1g53580 : 415.0) Mononuclear Fe(II)-containing member of the b-lactamase fold superfamily. ETHE1 is homodimeric in solution, exhibits low-level esterase activity, and specifically binds a single Fe(II) atom in the active site.; glyoxalase II 3 (GLY3); FUNCTIONS IN: hydrolase activity, acting on ester bonds, hydroxyacylglutathione hydrolase activity; INVOLVED IN: response to salt stress, methylglyoxal catabolic process to D-lactate; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: Metallo-hydrolase/oxidoreductase superfamily protein (TAIR:AT3G10850.1); Has 13580 Blast hits to 13577 proteins in 2470 species: Archae - 281; Bacteria - 8959; Metazoa - 398; Fungi - 229; Plants - 189; Viruses - 0; Other Eukaryotes - 3524 (source: NCBI BLink). & (gnl|cdd|36032 : 371.0) no description available & (gnl|cdd|30837 : 101.0) no description available & (reliability: 830.0) & (original description: Putative GLY3, Description = Persulfide dioxygenase ETHE1 homolog, mitochondrial, PFAM = PF00753)' T '24.1' 'Biodegradation of Xenobiotics.hydroxyacylglutathione hydrolase' 'niben101scf00438_271425-279169' '(at1g06130 : 469.0) glyoxalase 2-4 (GLX2-4); FUNCTIONS IN: hydrolase activity, hydroxyacylglutathione hydrolase activity, zinc ion binding; INVOLVED IN: methylglyoxal catabolic process to D-lactate; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279), Hydroxyacylglutathione hydrolase (InterPro:IPR017782); BEST Arabidopsis thaliana protein match is: glyoxalase 2-5 (TAIR:AT2G31350.2); Has 15453 Blast hits to 15452 proteins in 2500 species: Archae - 395; Bacteria - 9967; Metazoa - 477; Fungi - 329; Plants - 213; Viruses - 0; Other Eukaryotes - 4072 (source: NCBI BLink). & (gnl|cdd|36031 : 293.0) no description available & (gnl|cdd|77675 : 194.0) no description available & (reliability: 938.0) & (original description: Putative gloB, Description = Glyoxalase II, PFAM = PF16123;PF00753)' T '24.1' 'Biodegradation of Xenobiotics.hydroxyacylglutathione hydrolase' 'niben101scf00860_43787-61430' '(at3g10850 : 429.0) glyoxalase II cytoplasmic isozyme (Glx2-2) mRNA, complete; GLY2; FUNCTIONS IN: hydroxyacylglutathione hydrolase activity; INVOLVED IN: methylglyoxal catabolic process to D-lactate; LOCATED IN: endomembrane system, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279), Hydroxyacylglutathione hydrolase (InterPro:IPR017782); BEST Arabidopsis thaliana protein match is: glyoxalase 2-4 (TAIR:AT1G06130.2); Has 13211 Blast hits to 13207 proteins in 2289 species: Archae - 256; Bacteria - 8297; Metazoa - 430; Fungi - 311; Plants - 206; Viruses - 0; Other Eukaryotes - 3711 (source: NCBI BLink). & (gnl|cdd|36031 : 262.0) no description available & (gnl|cdd|77675 : 156.0) no description available & (reliability: 858.0) & (original description: Putative gloB, Description = Hydroxyacylglutathione hydrolase, mitochondrial, PFAM = PF00753;PF16123)' T '24.1' 'Biodegradation of Xenobiotics.hydroxyacylglutathione hydrolase' 'niben101scf03679_114322-134007' '(at3g10850 : 384.0) glyoxalase II cytoplasmic isozyme (Glx2-2) mRNA, complete; GLY2; FUNCTIONS IN: hydroxyacylglutathione hydrolase activity; INVOLVED IN: methylglyoxal catabolic process to D-lactate; LOCATED IN: endomembrane system, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279), Hydroxyacylglutathione hydrolase (InterPro:IPR017782); BEST Arabidopsis thaliana protein match is: glyoxalase 2-4 (TAIR:AT1G06130.2); Has 13211 Blast hits to 13207 proteins in 2289 species: Archae - 256; Bacteria - 8297; Metazoa - 430; Fungi - 311; Plants - 206; Viruses - 0; Other Eukaryotes - 3711 (source: NCBI BLink). & (gnl|cdd|36031 : 226.0) no description available & (gnl|cdd|77675 : 132.0) no description available & (reliability: 768.0) & (original description: Putative hagh, Description = Hydroxyacylglutathione hydrolase, mitochondrial, PFAM = PF16123)' T '24.1' 'Biodegradation of Xenobiotics.hydroxyacylglutathione hydrolase' 'niben101scf04945_213209-244907' '(at1g53580 : 390.0) Mononuclear Fe(II)-containing member of the b-lactamase fold superfamily. ETHE1 is homodimeric in solution, exhibits low-level esterase activity, and specifically binds a single Fe(II) atom in the active site.; glyoxalase II 3 (GLY3); FUNCTIONS IN: hydrolase activity, acting on ester bonds, hydroxyacylglutathione hydrolase activity; INVOLVED IN: response to salt stress, methylglyoxal catabolic process to D-lactate; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: Metallo-hydrolase/oxidoreductase superfamily protein (TAIR:AT3G10850.1); Has 13580 Blast hits to 13577 proteins in 2470 species: Archae - 281; Bacteria - 8959; Metazoa - 398; Fungi - 229; Plants - 189; Viruses - 0; Other Eukaryotes - 3524 (source: NCBI BLink). & (gnl|cdd|36032 : 348.0) no description available & (gnl|cdd|30837 : 84.5) no description available & (reliability: 780.0) & (original description: Putative Ethe1, Description = Persulfide dioxygenase ETHE1, mitochondrial, PFAM = PF00753)' T '24.1' 'Biodegradation of Xenobiotics.hydroxyacylglutathione hydrolase' 'niben101scf05575_403478-409772' '(at1g53580 : 418.0) Mononuclear Fe(II)-containing member of the b-lactamase fold superfamily. ETHE1 is homodimeric in solution, exhibits low-level esterase activity, and specifically binds a single Fe(II) atom in the active site.; glyoxalase II 3 (GLY3); FUNCTIONS IN: hydrolase activity, acting on ester bonds, hydroxyacylglutathione hydrolase activity; INVOLVED IN: response to salt stress, methylglyoxal catabolic process to D-lactate; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: Metallo-hydrolase/oxidoreductase superfamily protein (TAIR:AT3G10850.1); Has 13580 Blast hits to 13577 proteins in 2470 species: Archae - 281; Bacteria - 8959; Metazoa - 398; Fungi - 229; Plants - 189; Viruses - 0; Other Eukaryotes - 3524 (source: NCBI BLink). & (gnl|cdd|36032 : 380.0) no description available & (gnl|cdd|30837 : 103.0) no description available & (reliability: 836.0) & (original description: Putative GLY3, Description = Persulfide dioxygenase ETHE1 homolog, mitochondrial, PFAM = PF00753)' T '24.1' 'Biodegradation of Xenobiotics.hydroxyacylglutathione hydrolase' 'niben101scf34135_5212-11814' '(at1g53580 : 406.0) Mononuclear Fe(II)-containing member of the b-lactamase fold superfamily. ETHE1 is homodimeric in solution, exhibits low-level esterase activity, and specifically binds a single Fe(II) atom in the active site.; glyoxalase II 3 (GLY3); FUNCTIONS IN: hydrolase activity, acting on ester bonds, hydroxyacylglutathione hydrolase activity; INVOLVED IN: response to salt stress, methylglyoxal catabolic process to D-lactate; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: Metallo-hydrolase/oxidoreductase superfamily protein (TAIR:AT3G10850.1); Has 13580 Blast hits to 13577 proteins in 2470 species: Archae - 281; Bacteria - 8959; Metazoa - 398; Fungi - 229; Plants - 189; Viruses - 0; Other Eukaryotes - 3524 (source: NCBI BLink). & (gnl|cdd|36032 : 368.0) no description available & (gnl|cdd|30837 : 109.0) no description available & (reliability: 812.0) & (original description: Putative GLY3, Description = Persulfide dioxygenase ETHE1 homolog, mitochondrial, PFAM = PF00753)' T '24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'nbv0.3scaffold62328_8302-11154' '(at1g80160 : 181.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: lactoylglutathione lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 148 Blast hits to 148 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative Glo1, Description = Lactoylglutathione lyase/glyoxalase I family protein, PFAM = PF00903)' T '24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'nbv0.3scaffold70746_2840-5972' '(at1g80160 : 169.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: lactoylglutathione lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 148 Blast hits to 148 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative Glo1, Description = Lactoylglutathione lyase/glyoxalase I family protein, PFAM = PF00903)' T '24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'nbv0.5scaffold2437_395179-397965' '(at1g80160 : 182.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: lactoylglutathione lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 148 Blast hits to 148 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative Glo1, Description = Lactoylglutathione lyase, PFAM = PF00903)' T '24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben044scf00000014ctg028_2098-7481' '(at1g64185 : 187.0) Lactoylglutathione lyase / glyoxalase I family protein; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT5G41650.1); Has 78 Blast hits to 78 proteins in 36 species: Archae - 0; Bacteria - 18; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative LOC100281531, Description = Glyoxalase/bleomycin resistance protein/dioxygenase, PFAM = )' T '24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben044scf00000955ctg007_45212-47104' '(at1g67280 : 212.0) Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein; FUNCTIONS IN: lactoylglutathione lyase activity, metal ion binding; INVOLVED IN: response to cold, carbohydrate metabolic process; LOCATED IN: thylakoid, stromule, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase I (InterPro:IPR004361), Glyoxalase I, conserved site (InterPro:IPR018146), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: glyoxalase I homolog (TAIR:AT1G11840.6); Has 8895 Blast hits to 5126 proteins in 1627 species: Archae - 130; Bacteria - 5741; Metazoa - 515; Fungi - 327; Plants - 261; Viruses - 0; Other Eukaryotes - 1921 (source: NCBI BLink). & (q948t6|lgul_orysa : 165.0) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) (Allergen Ory s ?) (Allergen Glb33) (PP33) - Oryza sativa (Rice) & (gnl|cdd|38154 : 131.0) no description available & (gnl|cdd|77707 : 87.4) no description available & (reliability: 424.0) & (original description: Putative aspS, Description = Glyoxalase I, PFAM = PF00903;PF00903)' T '24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben044scf00005202ctg000_3262-6582' '(at1g80160 : 168.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: lactoylglutathione lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 148 Blast hits to 148 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative Glo1, Description = Lactoylglutathione lyase, PFAM = PF00903)' T '24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf00199_251315-254608' '(at2g28420 : 244.0) Lactoylglutathione lyase / glyoxalase I family protein; CONTAINS InterPro DOMAIN/s: Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G80160.1); Has 1054 Blast hits to 1054 proteins in 326 species: Archae - 2; Bacteria - 538; Metazoa - 105; Fungi - 6; Plants - 229; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (reliability: 488.0) & (original description: Putative At2g28420, Description = Expressed protein, PFAM = PF00903)' T '24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf00328_468278-478775' '(at2g32090 : 185.0) Lactoylglutathione lyase / glyoxalase I family protein; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT2G28420.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38155 : 83.9) no description available & (reliability: 370.0) & (original description: Putative At2g32090, Description = Lactoylglutathione lyase / glyoxalase I family protein, PFAM = PF13669)' T '24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf00472_968624-971641' '(at1g80160 : 186.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: lactoylglutathione lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 148 Blast hits to 148 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative Glo1, Description = Lactoylglutathione lyase, PFAM = PF00903)' T '24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf00472_968796-971575' '(at1g80160 : 186.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: lactoylglutathione lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 148 Blast hits to 148 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative Glo1, Description = Lactoylglutathione lyase/glyoxalase I family protein, PFAM = PF00903)' T '24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf00611_944507-951045' '(at5g57040 : 249.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G80160.1); Has 1348 Blast hits to 1348 proteins in 501 species: Archae - 0; Bacteria - 1093; Metazoa - 6; Fungi - 0; Plants - 176; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative THIOKS190049, Description = Glyoxalase/bleomycin resistance protein/dioxygenase, PFAM = PF00903)' T '24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf00739_387316-391698' '(at1g80160 : 239.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: lactoylglutathione lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 148 Blast hits to 148 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 478.0) & (original description: Putative Glo1, Description = Lactoylglutathione lyase, PFAM = PF00903)' T '24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf01693_156962-164179' '(o49818|lgul_cicar : 321.0) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) - Cicer arietinum (Chickpea) (Garbanzo) & (at1g08110 : 298.0) lactoylglutathione lyase family protein / glyoxalase I family protein; FUNCTIONS IN: calmodulin binding, lactoylglutathione lyase activity; INVOLVED IN: response to cadmium ion, carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase I (InterPro:IPR004361), Glyoxalase I, conserved site (InterPro:IPR018146), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein (TAIR:AT1G67280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38155 : 229.0) no description available & (gnl|cdd|77707 : 102.0) no description available & (reliability: 596.0) & (original description: Putative GLX1, Description = Lactoylglutathione lyase, PFAM = PF00903)' T '24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf01962_164960-171998' '(at1g67280 : 537.0) Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein; FUNCTIONS IN: lactoylglutathione lyase activity, metal ion binding; INVOLVED IN: response to cold, carbohydrate metabolic process; LOCATED IN: thylakoid, stromule, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase I (InterPro:IPR004361), Glyoxalase I, conserved site (InterPro:IPR018146), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: glyoxalase I homolog (TAIR:AT1G11840.6); Has 8895 Blast hits to 5126 proteins in 1627 species: Archae - 130; Bacteria - 5741; Metazoa - 515; Fungi - 327; Plants - 261; Viruses - 0; Other Eukaryotes - 1921 (source: NCBI BLink). & (q948t6|lgul_orysa : 424.0) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) (Allergen Ory s ?) (Allergen Glb33) (PP33) - Oryza sativa (Rice) & (gnl|cdd|38154 : 355.0) no description available & (gnl|cdd|77707 : 163.0) no description available & (reliability: 1074.0) & (original description: Putative gloA, Description = Glyoxalase I, PFAM = PF00903;PF00903)' T '24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf03224_1240924-1245245' '(at1g80160 : 268.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: lactoylglutathione lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 148 Blast hits to 148 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative Glo1, Description = Lactoylglutathione lyase, PFAM = PF00903)' T '24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf04334_31938-36447' '(at1g80160 : 160.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: lactoylglutathione lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 148 Blast hits to 148 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative Glo1, Description = Lactoylglutathione lyase/glyoxalase I family protein, PFAM = PF00903)' T '24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf04560_765453-771333' '(o49818|lgul_cicar : 303.0) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) - Cicer arietinum (Chickpea) (Garbanzo) & (at1g08110 : 284.0) lactoylglutathione lyase family protein / glyoxalase I family protein; FUNCTIONS IN: calmodulin binding, lactoylglutathione lyase activity; INVOLVED IN: response to cadmium ion, carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase I (InterPro:IPR004361), Glyoxalase I, conserved site (InterPro:IPR018146), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein (TAIR:AT1G67280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38155 : 227.0) no description available & (gnl|cdd|77707 : 103.0) no description available & (reliability: 568.0) & (original description: Putative GLX1, Description = Lactoylglutathione lyase, PFAM = PF00903)' T '24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf05438_264656-274785' '(at1g11840 : 253.0) Encodes a glyoxalase I homolog ATGLX1.; glyoxalase I homolog (GLX1); FUNCTIONS IN: lactoylglutathione lyase activity, metal ion binding; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase I (InterPro:IPR004361), Glyoxalase I, conserved site (InterPro:IPR018146), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein (TAIR:AT1G67280.1). & (q948t6|lgul_orysa : 247.0) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) (Allergen Ory s ?) (Allergen Glb33) (PP33) - Oryza sativa (Rice) & (gnl|cdd|38154 : 181.0) no description available & (gnl|cdd|77707 : 119.0) no description available & (reliability: 506.0) & (original description: Putative gloA, Description = Glyoxalase I, PFAM = PF00903)' T '24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf05506_403137-405938' '(at1g07645 : 206.0) dessication-induced 1VOC superfamily protein (DSI-1VOC); FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: seed; CONTAINS InterPro DOMAIN/s: Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative F24B9.26, Description = Dessication-induced 1VOC-like protein, PFAM = PF12681)' T '24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf05895_305744-308865' '(at1g80160 : 159.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: lactoylglutathione lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 148 Blast hits to 148 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative PGSC0003DMG400003626, Description = Lactoylglutathione lyase/glyoxalase I family protein, PFAM = PF00903)' T '24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf07829_97759-100665' '(at1g80160 : 265.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: lactoylglutathione lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 148 Blast hits to 148 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 530.0) & (original description: Putative Glo1, Description = Lactoylglutathione lyase, PFAM = PF00903)' T '24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf08991_61185-73050' '(at1g11840 : 483.0) Encodes a glyoxalase I homolog ATGLX1.; glyoxalase I homolog (GLX1); FUNCTIONS IN: lactoylglutathione lyase activity, metal ion binding; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase I (InterPro:IPR004361), Glyoxalase I, conserved site (InterPro:IPR018146), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein (TAIR:AT1G67280.1). & (q948t6|lgul_orysa : 465.0) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) (Allergen Ory s ?) (Allergen Glb33) (PP33) - Oryza sativa (Rice) & (gnl|cdd|38154 : 348.0) no description available & (gnl|cdd|77707 : 158.0) no description available & (reliability: 966.0) & (original description: Putative gloA, Description = Glyoxalase I, PFAM = PF00903;PF00903)' T '24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf14312_63846-75043' '(at5g57040 : 250.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G80160.1); Has 1348 Blast hits to 1348 proteins in 501 species: Archae - 0; Bacteria - 1093; Metazoa - 6; Fungi - 0; Plants - 176; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (reliability: 500.0) & (original description: Putative lactoylglutathio, Description = Lactoylglutathione lyase family protein / glyoxalase I family protein, PFAM = PF00903)' T '24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf15109_53089-60441' '(at1g67280 : 449.0) Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein; FUNCTIONS IN: lactoylglutathione lyase activity, metal ion binding; INVOLVED IN: response to cold, carbohydrate metabolic process; LOCATED IN: thylakoid, stromule, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase I (InterPro:IPR004361), Glyoxalase I, conserved site (InterPro:IPR018146), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: glyoxalase I homolog (TAIR:AT1G11840.6); Has 8895 Blast hits to 5126 proteins in 1627 species: Archae - 130; Bacteria - 5741; Metazoa - 515; Fungi - 327; Plants - 261; Viruses - 0; Other Eukaryotes - 1921 (source: NCBI BLink). & (q948t6|lgul_orysa : 387.0) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) (Allergen Ory s ?) (Allergen Glb33) (PP33) - Oryza sativa (Rice) & (gnl|cdd|38154 : 327.0) no description available & (gnl|cdd|77707 : 128.0) no description available & (reliability: 898.0) & (original description: Putative glo1, Description = Glyoxalase I, PFAM = PF00903;PF00903)' T '24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'niben101scf20283_127056-194234' '(at1g80160 : 168.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: lactoylglutathione lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 148 Blast hits to 148 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative Glo1, Description = Lactoylglutathione lyase, PFAM = PF00903)' T '24.3' 'Biodegradation of Xenobiotics.3-hydroxybutyryl-CoA dehydrogenase' 'niben101scf01175_1-8192' '(at3g15290 : 450.0) 3-hydroxyacyl-CoA dehydrogenase family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: fatty acid metabolic process, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase (InterPro:IPR022694); BEST Arabidopsis thaliana protein match is: multifunctional protein 2 (TAIR:AT3G06860.1); Has 14531 Blast hits to 13544 proteins in 1840 species: Archae - 475; Bacteria - 9128; Metazoa - 588; Fungi - 237; Plants - 152; Viruses - 0; Other Eukaryotes - 3951 (source: NCBI BLink). & (gnl|cdd|82260 : 377.0) no description available & (gnl|cdd|37515 : 365.0) no description available & (q8w1l6|mfp_orysa : 136.0) Peroxisomal fatty acid beta-oxidation multifunctional protein (MFP) [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase (E & (reliability: 900.0) & (original description: Putative mmgB, Description = Putative 3-hydroxybutyryl-CoA dehydrogenase, PFAM = PF00725;PF02737)' T '25' 'C1-metabolism' 'nbv0.3scaffold6829_3016-8690' '(at2g41530 : 229.0) Encodes a protein with S-formylglutathione hydrolase activity.; S-formylglutathione hydrolase (SFGH); FUNCTIONS IN: hydrolase activity, acting on ester bonds, S-formylglutathione hydrolase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Putative esterase (InterPro:IPR000801), S-formylglutathione hydrolase (InterPro:IPR014186); Has 3295 Blast hits to 3294 proteins in 1269 species: Archae - 2; Bacteria - 2478; Metazoa - 258; Fungi - 146; Plants - 60; Viruses - 0; Other Eukaryotes - 351 (source: NCBI BLink). & (gnl|cdd|38311 : 204.0) no description available & (gnl|cdd|30972 : 102.0) no description available & (reliability: 458.0) & (original description: Putative Esd, Description = S-formylglutathione hydrolase, PFAM = PF00756)' T '25' 'C1-metabolism' 'nbv0.5scaffold133_924529-932013' '(o49954|gcsp_soltu : 1897.0) Glycine dehydrogenase [decarboxylating], mitochondrial precursor (EC 1.4.4.2) (Glycine decarboxylase) (Glycine cleavage system P-protein) - Solanum tuberosum (Potato) & (at2g26080 : 1755.0) glycine decarboxylase P-protein 2 (GLDP2); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, ATP binding; INVOLVED IN: oxidation reduction, glycine decarboxylation via glycine cleavage system, glycine metabolic process; LOCATED IN: mitochondrion, glycine cleavage complex, chloroplast, chloroplast envelope; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Glycine cleavage system P-protein-like (InterPro:IPR020581), Glycine cleavage system P-protein (InterPro:IPR003437), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Glycine cleavage system P-protein, N-terminal (InterPro:IPR020580); BEST Arabidopsis thaliana protein match is: glycine decarboxylase P-protein 1 (TAIR:AT4G33010.1); Has 12461 Blast hits to 11458 proteins in 1938 species: Archae - 256; Bacteria - 5279; Metazoa - 139; Fungi - 214; Plants - 99; Viruses - 0; Other Eukaryotes - 6474 (source: NCBI BLink). & (gnl|cdd|37251 : 1652.0) no description available & (gnl|cdd|81549 : 1565.0) no description available & (reliability: 3510.0) & (original description: Putative GDCSP, Description = Glycine dehydrogenase (decarboxylating), mitochondrial, PFAM = PF02347;PF02347)' T '25' 'C1-metabolism' 'nbv0.5scaffold704_196690-203944' '(p51820|drts_soybn : 848.0) Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) [Includes: Dihydrofolate reductase (EC 1.5.1.3); Thymidylate synthase (EC 2.1.1.45)] - Glycine max (Soybean) & (at2g16370 : 825.0) Encodes a bifunctional dihydrofolate reductase - thymidylate synthase gene. This is unique in Arabidopsis and protozoa. Other organisms have independent genes for this function.; thymidylate synthase 1 (THY-1); CONTAINS InterPro DOMAIN/s: Thymidylate synthase, active site (InterPro:IPR020940), Dihydrofolate reductase domain (InterPro:IPR001796), Dihydrofolate reductase conserved site (InterPro:IPR017925), Bifunctional dihydrofolate reductase/thymidylate synthase (InterPro:IPR012262), Thymidylate synthase (InterPro:IPR000398); BEST Arabidopsis thaliana protein match is: thymidylate synthase 2 (TAIR:AT4G34570.1); Has 13474 Blast hits to 13433 proteins in 2607 species: Archae - 76; Bacteria - 8708; Metazoa - 513; Fungi - 424; Plants - 92; Viruses - 253; Other Eukaryotes - 3408 (source: NCBI BLink). & (gnl|cdd|35892 : 545.0) no description available & (gnl|cdd|84679 : 500.0) no description available & (reliability: 1650.0) & (original description: Putative tyms, Description = Bifunctional dihydrofolate reductase-thymidylate synthase, PFAM = PF00186;PF00303)' T '25' 'C1-metabolism' 'niben044scf00007101ctg007_1-8662' '(o49954|gcsp_soltu : 1903.0) Glycine dehydrogenase [decarboxylating], mitochondrial precursor (EC 1.4.4.2) (Glycine decarboxylase) (Glycine cleavage system P-protein) - Solanum tuberosum (Potato) & (at2g26080 : 1756.0) glycine decarboxylase P-protein 2 (GLDP2); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, ATP binding; INVOLVED IN: oxidation reduction, glycine decarboxylation via glycine cleavage system, glycine metabolic process; LOCATED IN: mitochondrion, glycine cleavage complex, chloroplast, chloroplast envelope; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Glycine cleavage system P-protein-like (InterPro:IPR020581), Glycine cleavage system P-protein (InterPro:IPR003437), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Glycine cleavage system P-protein, N-terminal (InterPro:IPR020580); BEST Arabidopsis thaliana protein match is: glycine decarboxylase P-protein 1 (TAIR:AT4G33010.1); Has 12461 Blast hits to 11458 proteins in 1938 species: Archae - 256; Bacteria - 5279; Metazoa - 139; Fungi - 214; Plants - 99; Viruses - 0; Other Eukaryotes - 6474 (source: NCBI BLink). & (gnl|cdd|37251 : 1660.0) no description available & (gnl|cdd|81549 : 1577.0) no description available & (reliability: 3512.0) & (original description: Putative GDCSP, Description = Glycine dehydrogenase (decarboxylating), mitochondrial, PFAM = PF02347;PF02347)' T '25' 'C1-metabolism' 'niben101scf00893_178370-183440' '(p45350|drts_dauca : 872.0) Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) [Includes: Dihydrofolate reductase (EC 1.5.1.3); Thymidylate synthase (EC 2.1.1.45)] - Daucus carota (Carrot) & (at2g16370 : 841.0) Encodes a bifunctional dihydrofolate reductase - thymidylate synthase gene. This is unique in Arabidopsis and protozoa. Other organisms have independent genes for this function.; thymidylate synthase 1 (THY-1); CONTAINS InterPro DOMAIN/s: Thymidylate synthase, active site (InterPro:IPR020940), Dihydrofolate reductase domain (InterPro:IPR001796), Dihydrofolate reductase conserved site (InterPro:IPR017925), Bifunctional dihydrofolate reductase/thymidylate synthase (InterPro:IPR012262), Thymidylate synthase (InterPro:IPR000398); BEST Arabidopsis thaliana protein match is: thymidylate synthase 2 (TAIR:AT4G34570.1); Has 13474 Blast hits to 13433 proteins in 2607 species: Archae - 76; Bacteria - 8708; Metazoa - 513; Fungi - 424; Plants - 92; Viruses - 253; Other Eukaryotes - 3408 (source: NCBI BLink). & (gnl|cdd|35892 : 546.0) no description available & (gnl|cdd|84679 : 502.0) no description available & (reliability: 1682.0) & (original description: Putative ts, Description = Bifunctional dihydrofolate reductase-thymidylate synthase, PFAM = PF00303;PF00186)' T '25' 'C1-metabolism' 'niben101scf01330_194652-221181' '(at4g31120 : 990.0) Involved in vernalization. Required for epigenetic silencing of FLC, and for vernalization-mediated histone modification.; PROTEIN ARGININE METHYLTRANSFERASE 5 (PRMT5); FUNCTIONS IN: protein methyltransferase activity; INVOLVED IN: positive regulation of vernalization response, regulation of flower development; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Skb1 methyltransferase (InterPro:IPR007857); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36040 : 767.0) no description available & (gnl|cdd|86811 : 608.0) no description available & (reliability: 1980.0) & (original description: Putative PMRT15, Description = Protein arginine N-methyltransferase 1.5, PFAM = PF05185;PF17285;PF17286)' T '25' 'C1-metabolism' 'niben101scf03733_107606-109905' '(at5g56260 : 268.0) Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; FUNCTIONS IN: ribonuclease inhibitor activity; INVOLVED IN: regulation of RNA metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase (InterPro:IPR005493), Ribonuclease E inhibitor RraA (InterPro:IPR010203); BEST Arabidopsis thaliana protein match is: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase (TAIR:AT5G16450.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|82960 : 216.0) no description available & (reliability: 536.0) & (original description: Putative ftsY, Description = 4-hydroxy-4-methyl-2-oxoglutarate aldolase, PFAM = PF03737)' T '25' 'C1-metabolism' 'niben101scf03839_441005-451014' '(o49954|gcsp_soltu : 1943.0) Glycine dehydrogenase [decarboxylating], mitochondrial precursor (EC 1.4.4.2) (Glycine decarboxylase) (Glycine cleavage system P-protein) - Solanum tuberosum (Potato) & (at2g26080 : 1792.0) glycine decarboxylase P-protein 2 (GLDP2); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, ATP binding; INVOLVED IN: oxidation reduction, glycine decarboxylation via glycine cleavage system, glycine metabolic process; LOCATED IN: mitochondrion, glycine cleavage complex, chloroplast, chloroplast envelope; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Glycine cleavage system P-protein-like (InterPro:IPR020581), Glycine cleavage system P-protein (InterPro:IPR003437), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Glycine cleavage system P-protein, N-terminal (InterPro:IPR020580); BEST Arabidopsis thaliana protein match is: glycine decarboxylase P-protein 1 (TAIR:AT4G33010.1); Has 12461 Blast hits to 11458 proteins in 1938 species: Archae - 256; Bacteria - 5279; Metazoa - 139; Fungi - 214; Plants - 99; Viruses - 0; Other Eukaryotes - 6474 (source: NCBI BLink). & (gnl|cdd|37251 : 1685.0) no description available & (gnl|cdd|81549 : 1602.0) no description available & (reliability: 3584.0) & (original description: Putative GDCSP, Description = Glycine dehydrogenase (decarboxylating), mitochondrial, PFAM = PF02347;PF02347)' T '25' 'C1-metabolism' 'niben101scf04052_68532-71029' '(at5g16450 : 291.0) Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; FUNCTIONS IN: ribonuclease inhibitor activity; INVOLVED IN: regulation of RNA metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase (InterPro:IPR005493), Ribonuclease E inhibitor RraA (InterPro:IPR010203); BEST Arabidopsis thaliana protein match is: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase (TAIR:AT3G02770.1); Has 3649 Blast hits to 3649 proteins in 1097 species: Archae - 92; Bacteria - 2860; Metazoa - 2; Fungi - 59; Plants - 104; Viruses - 0; Other Eukaryotes - 532 (source: NCBI BLink). & (gnl|cdd|82960 : 208.0) no description available & (reliability: 582.0) & (original description: Putative ftsY, Description = 4-hydroxy-4-methyl-2-oxoglutarate aldolase, PFAM = PF03737)' T '25' 'C1-metabolism' 'niben101scf04411_124609-132115' '(at2g41530 : 489.0) Encodes a protein with S-formylglutathione hydrolase activity.; S-formylglutathione hydrolase (SFGH); FUNCTIONS IN: hydrolase activity, acting on ester bonds, S-formylglutathione hydrolase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Putative esterase (InterPro:IPR000801), S-formylglutathione hydrolase (InterPro:IPR014186); Has 3295 Blast hits to 3294 proteins in 1269 species: Archae - 2; Bacteria - 2478; Metazoa - 258; Fungi - 146; Plants - 60; Viruses - 0; Other Eukaryotes - 351 (source: NCBI BLink). & (gnl|cdd|38311 : 439.0) no description available & (gnl|cdd|30972 : 244.0) no description available & (reliability: 978.0) & (original description: Putative SFGH, Description = S-formylglutathione hydrolase, PFAM = PF00756)' T '25.1' 'C1-metabolism.glycine hydroxymethyltransferase' 'niben044scf00012020ctg001_1947-6866' '(at4g13930 : 854.0) Encodes a serine hydroxymethyltransferase maximally expressed in root; serine hydroxymethyltransferase 4 (SHM4); FUNCTIONS IN: pyridoxal phosphate binding, glycine hydroxymethyltransferase activity, catalytic activity; INVOLVED IN: response to cadmium ion, glycine metabolic process, L-serine metabolic process; LOCATED IN: cytosol, plasma membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT4G13890.1); Has 11689 Blast hits to 11661 proteins in 2862 species: Archae - 259; Bacteria - 6437; Metazoa - 341; Fungi - 289; Plants - 375; Viruses - 6; Other Eukaryotes - 3982 (source: NCBI BLink). & (gnl|cdd|37678 : 819.0) no description available & (gnl|cdd|64334 : 580.0) no description available & (p34899|glym_pea : 548.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Pisum sativum (Garden pea) & (reliability: 1708.0) & (original description: Putative SHM4, Description = Serine hydroxymethyltransferase 4, PFAM = PF00464)' T '25.1' 'C1-metabolism.glycine hydroxymethyltransferase' 'niben044scf00045520ctg007_1378-5883' '(gnl|cdd|37678 : 631.0) no description available & (at1g36370 : 619.0) Encodes a putative serine hydroxymethyltransferase.; serine hydroxymethyltransferase 7 (SHM7); FUNCTIONS IN: pyridoxal phosphate binding, glycine hydroxymethyltransferase activity, catalytic activity; INVOLVED IN: response to cadmium ion, glycine metabolic process, L-serine metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine hydroxymethyltransferase 6 (TAIR:AT1G22020.1); Has 11689 Blast hits to 11664 proteins in 2845 species: Archae - 258; Bacteria - 6485; Metazoa - 362; Fungi - 287; Plants - 350; Viruses - 6; Other Eukaryotes - 3941 (source: NCBI BLink). & (gnl|cdd|64334 : 474.0) no description available & (p34899|glym_pea : 411.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Pisum sativum (Garden pea) & (reliability: 1238.0) & (original description: Putative shmt, Description = Serine hydroxymethyltransferase, PFAM = PF00464)' T '25.1' 'C1-metabolism.glycine hydroxymethyltransferase' 'niben101scf00069_1224252-1232110' '(p50433|glym_soltu : 974.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Solanum tuberosum (Potato) & (at4g37930 : 916.0) Encodes a protein with mitochondrial serine hydroxymethyltransferase activity, which functions in the photorespiratory pathway, catalyzes the conversion of serine and tetrahydrofolate to glycine and 5,10-methylene tetrahydrofolate. Involved in controlling cell damage caused by abiotic stress, such as high light and salt and the hypersensitive defense response of plants.; serine transhydroxymethyltransferase 1 (SHM1); FUNCTIONS IN: poly(U) RNA binding, glycine hydroxymethyltransferase activity; INVOLVED IN: in 8 processes; LOCATED IN: in 9 components; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine hydroxymethyltransferase 2 (TAIR:AT5G26780.1); Has 11621 Blast hits to 11596 proteins in 2825 species: Archae - 258; Bacteria - 6371; Metazoa - 337; Fungi - 287; Plants - 346; Viruses - 6; Other Eukaryotes - 4016 (source: NCBI BLink). & (gnl|cdd|37678 : 834.0) no description available & (gnl|cdd|64334 : 630.0) no description available & (reliability: 1832.0) & (original description: Putative shm2, Description = Serine hydroxymethyltransferase, PFAM = PF00464)' T '25.1' 'C1-metabolism.glycine hydroxymethyltransferase' 'niben101scf00472_485914-492589' '(at1g36370 : 784.0) Encodes a putative serine hydroxymethyltransferase.; serine hydroxymethyltransferase 7 (SHM7); FUNCTIONS IN: pyridoxal phosphate binding, glycine hydroxymethyltransferase activity, catalytic activity; INVOLVED IN: response to cadmium ion, glycine metabolic process, L-serine metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine hydroxymethyltransferase 6 (TAIR:AT1G22020.1); Has 11689 Blast hits to 11664 proteins in 2845 species: Archae - 258; Bacteria - 6485; Metazoa - 362; Fungi - 287; Plants - 350; Viruses - 6; Other Eukaryotes - 3941 (source: NCBI BLink). & (gnl|cdd|37678 : 755.0) no description available & (gnl|cdd|64334 : 530.0) no description available & (p50433|glym_soltu : 482.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Solanum tuberosum (Potato) & (reliability: 1568.0) & (original description: Putative SHM6, Description = Serine hydroxymethyltransferase 6, PFAM = PF00464)' T '25.1' 'C1-metabolism.glycine hydroxymethyltransferase' 'niben101scf01048_13230-20354' '(p50433|glym_soltu : 969.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Solanum tuberosum (Potato) & (at4g37930 : 934.0) Encodes a protein with mitochondrial serine hydroxymethyltransferase activity, which functions in the photorespiratory pathway, catalyzes the conversion of serine and tetrahydrofolate to glycine and 5,10-methylene tetrahydrofolate. Involved in controlling cell damage caused by abiotic stress, such as high light and salt and the hypersensitive defense response of plants.; serine transhydroxymethyltransferase 1 (SHM1); FUNCTIONS IN: poly(U) RNA binding, glycine hydroxymethyltransferase activity; INVOLVED IN: in 8 processes; LOCATED IN: in 9 components; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine hydroxymethyltransferase 2 (TAIR:AT5G26780.1); Has 11621 Blast hits to 11596 proteins in 2825 species: Archae - 258; Bacteria - 6371; Metazoa - 337; Fungi - 287; Plants - 346; Viruses - 6; Other Eukaryotes - 4016 (source: NCBI BLink). & (gnl|cdd|37678 : 834.0) no description available & (gnl|cdd|64334 : 625.0) no description available & (reliability: 1868.0) & (original description: Putative shm2, Description = Serine hydroxymethyltransferase, PFAM = PF00464)' T '25.1' 'C1-metabolism.glycine hydroxymethyltransferase' 'niben101scf01171_339957-344758' '(at4g13930 : 856.0) Encodes a serine hydroxymethyltransferase maximally expressed in root; serine hydroxymethyltransferase 4 (SHM4); FUNCTIONS IN: pyridoxal phosphate binding, glycine hydroxymethyltransferase activity, catalytic activity; INVOLVED IN: response to cadmium ion, glycine metabolic process, L-serine metabolic process; LOCATED IN: cytosol, plasma membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT4G13890.1); Has 11689 Blast hits to 11661 proteins in 2862 species: Archae - 259; Bacteria - 6437; Metazoa - 341; Fungi - 289; Plants - 375; Viruses - 6; Other Eukaryotes - 3982 (source: NCBI BLink). & (gnl|cdd|37678 : 822.0) no description available & (gnl|cdd|64334 : 577.0) no description available & (p34899|glym_pea : 550.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Pisum sativum (Garden pea) & (reliability: 1712.0) & (original description: Putative shmt2, Description = Serine hydroxymethyltransferase 2, PFAM = PF00464)' T '25.1' 'C1-metabolism.glycine hydroxymethyltransferase' 'niben101scf02122_330344-338372' '(at1g36370 : 780.0) Encodes a putative serine hydroxymethyltransferase.; serine hydroxymethyltransferase 7 (SHM7); FUNCTIONS IN: pyridoxal phosphate binding, glycine hydroxymethyltransferase activity, catalytic activity; INVOLVED IN: response to cadmium ion, glycine metabolic process, L-serine metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine hydroxymethyltransferase 6 (TAIR:AT1G22020.1); Has 11689 Blast hits to 11664 proteins in 2845 species: Archae - 258; Bacteria - 6485; Metazoa - 362; Fungi - 287; Plants - 350; Viruses - 6; Other Eukaryotes - 3941 (source: NCBI BLink). & (gnl|cdd|37678 : 758.0) no description available & (gnl|cdd|64334 : 530.0) no description available & (p50433|glym_soltu : 483.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Solanum tuberosum (Potato) & (reliability: 1560.0) & (original description: Putative SHM6, Description = Serine hydroxymethyltransferase 6, PFAM = PF00464)' T '25.1' 'C1-metabolism.glycine hydroxymethyltransferase' 'niben101scf03624_667149-673981' '(p34899|glym_pea : 866.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Pisum sativum (Garden pea) & (at5g26780 : 860.0) Encodes a protein with serine hydroxymethyltransferase activity which is thought to be localized in the mitochondrial matrix. SHM2 expression fails to rescue the conditional lethal phenotype of the shm1-1 mutant, defective in SHM1.; serine hydroxymethyltransferase 2 (SHM2); FUNCTIONS IN: glycine hydroxymethyltransferase activity, cobalt ion binding, zinc ion binding; INVOLVED IN: glycine metabolic process, L-serine metabolic process; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex I; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine transhydroxymethyltransferase 1 (TAIR:AT4G37930.1); Has 11562 Blast hits to 11539 proteins in 2821 species: Archae - 258; Bacteria - 6362; Metazoa - 333; Fungi - 287; Plants - 321; Viruses - 6; Other Eukaryotes - 3995 (source: NCBI BLink). & (gnl|cdd|37678 : 834.0) no description available & (gnl|cdd|64334 : 629.0) no description available & (reliability: 1720.0) & (original description: Putative shmt, Description = Serine hydroxymethyltransferase, PFAM = PF00464)' T '25.1' 'C1-metabolism.glycine hydroxymethyltransferase' 'niben101scf04539_106467-112667' '(at4g32520 : 830.0) Encodes a serine hydroxymethyltransferase SHMT3 located in the plastid.; serine hydroxymethyltransferase 3 (SHM3); FUNCTIONS IN: glycine hydroxymethyltransferase activity; INVOLVED IN: glycine metabolic process, L-serine metabolic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine transhydroxymethyltransferase 1 (TAIR:AT4G37930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37678 : 776.0) no description available & (gnl|cdd|64334 : 602.0) no description available & (p34899|glym_pea : 565.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Pisum sativum (Garden pea) & (reliability: 1660.0) & (original description: Putative for, Description = Serine hydroxymethyltransferase, PFAM = PF00464)' T '25.1' 'C1-metabolism.glycine hydroxymethyltransferase' 'niben101scf04840_190938-197233' '(gnl|cdd|37678 : 742.0) no description available & (at1g36370 : 737.0) Encodes a putative serine hydroxymethyltransferase.; serine hydroxymethyltransferase 7 (SHM7); FUNCTIONS IN: pyridoxal phosphate binding, glycine hydroxymethyltransferase activity, catalytic activity; INVOLVED IN: response to cadmium ion, glycine metabolic process, L-serine metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine hydroxymethyltransferase 6 (TAIR:AT1G22020.1); Has 11689 Blast hits to 11664 proteins in 2845 species: Archae - 258; Bacteria - 6485; Metazoa - 362; Fungi - 287; Plants - 350; Viruses - 6; Other Eukaryotes - 3941 (source: NCBI BLink). & (gnl|cdd|64334 : 526.0) no description available & (p50433|glym_soltu : 475.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Solanum tuberosum (Potato) & (reliability: 1474.0) & (original description: Putative SHM7, Description = Serine hydroxymethyltransferase 7, PFAM = PF00464)' T '25.1' 'C1-metabolism.glycine hydroxymethyltransferase' 'niben101scf07073_208552-215679' '(p50433|glym_soltu : 966.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Solanum tuberosum (Potato) & (at4g37930 : 935.0) Encodes a protein with mitochondrial serine hydroxymethyltransferase activity, which functions in the photorespiratory pathway, catalyzes the conversion of serine and tetrahydrofolate to glycine and 5,10-methylene tetrahydrofolate. Involved in controlling cell damage caused by abiotic stress, such as high light and salt and the hypersensitive defense response of plants.; serine transhydroxymethyltransferase 1 (SHM1); FUNCTIONS IN: poly(U) RNA binding, glycine hydroxymethyltransferase activity; INVOLVED IN: in 8 processes; LOCATED IN: in 9 components; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine hydroxymethyltransferase 2 (TAIR:AT5G26780.1); Has 11621 Blast hits to 11596 proteins in 2825 species: Archae - 258; Bacteria - 6371; Metazoa - 337; Fungi - 287; Plants - 346; Viruses - 6; Other Eukaryotes - 4016 (source: NCBI BLink). & (gnl|cdd|37678 : 832.0) no description available & (gnl|cdd|64334 : 623.0) no description available & (reliability: 1870.0) & (original description: Putative shm2, Description = Serine hydroxymethyltransferase, PFAM = PF00464)' T '25.1' 'C1-metabolism.glycine hydroxymethyltransferase' 'niben101scf07116_93796-99821' '(at4g32520 : 832.0) Encodes a serine hydroxymethyltransferase SHMT3 located in the plastid.; serine hydroxymethyltransferase 3 (SHM3); FUNCTIONS IN: glycine hydroxymethyltransferase activity; INVOLVED IN: glycine metabolic process, L-serine metabolic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine transhydroxymethyltransferase 1 (TAIR:AT4G37930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37678 : 781.0) no description available & (gnl|cdd|64334 : 604.0) no description available & (p50433|glym_soltu : 570.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Solanum tuberosum (Potato) & (reliability: 1664.0) & (original description: Putative SHM3, Description = Serine hydroxymethyltransferase 3, chloroplastic, PFAM = PF00464)' T '25.1' 'C1-metabolism.glycine hydroxymethyltransferase' 'niben101scf07161_16736-21509' '(at4g13930 : 855.0) Encodes a serine hydroxymethyltransferase maximally expressed in root; serine hydroxymethyltransferase 4 (SHM4); FUNCTIONS IN: pyridoxal phosphate binding, glycine hydroxymethyltransferase activity, catalytic activity; INVOLVED IN: response to cadmium ion, glycine metabolic process, L-serine metabolic process; LOCATED IN: cytosol, plasma membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT4G13890.1); Has 11689 Blast hits to 11661 proteins in 2862 species: Archae - 259; Bacteria - 6437; Metazoa - 341; Fungi - 289; Plants - 375; Viruses - 6; Other Eukaryotes - 3982 (source: NCBI BLink). & (gnl|cdd|37678 : 821.0) no description available & (gnl|cdd|64334 : 577.0) no description available & (p34899|glym_pea : 549.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Pisum sativum (Garden pea) & (reliability: 1710.0) & (original description: Putative SHM4, Description = Serine hydroxymethyltransferase 4, PFAM = PF00464)' T '25.2' 'C1-metabolism.formate-tetrahydrofolate ligase' 'niben101scf07182_411043-419435' '(at1g50480 : 1063.0) 10-formyltetrahydrofolate synthetase (THFS) mRNA, complete; 10-formyltetrahydrofolate synthetase (THFS); FUNCTIONS IN: formate-tetrahydrofolate ligase activity, copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, folic acid and derivative biosynthetic process; LOCATED IN: apoplast, chloroplast, plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Formate-tetrahydrofolate ligase, FTHFS, conserved site (InterPro:IPR020628), Formate-tetrahydrofolate ligase, FTHFS (InterPro:IPR000559); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G12280.1); Has 7211 Blast hits to 7172 proteins in 1581 species: Archae - 30; Bacteria - 3794; Metazoa - 307; Fungi - 186; Plants - 64; Viruses - 0; Other Eukaryotes - 2830 (source: NCBI BLink). & (p28723|fths_spiol : 1062.0) Formate--tetrahydrofolate ligase (EC 6.3.4.3) (Formyltetrahydrofolate synthetase) (10-formyletrahydrofolate synthetase) (FHS) (FTHFS) - Spinacia oleracea (Spinach) & (gnl|cdd|39431 : 917.0) no description available & (gnl|cdd|85351 : 849.0) no description available & (reliability: 2126.0) & (original description: Putative fhs, Description = C-1-tetrahydrofolate synthase, cytoplasmic, PFAM = PF01268)' T '25.3' 'C1-metabolism.dihydropteridine diphosphokinase' 'niben101scf02151_485720-528121' '(at4g30000 : 678.0) Dihydropterin pyrophosphokinase / Dihydropteroate synthase; FUNCTIONS IN: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity, dihydropteroate synthase activity; INVOLVED IN: pteridine and derivative metabolic process, cellular metabolic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dihydropteroate synthase-like (InterPro:IPR011005), 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK (InterPro:IPR000550), Dihydropteroate synthase (InterPro:IPR006390), Pterin-binding (InterPro:IPR000489); BEST Arabidopsis thaliana protein match is: Dihydropterin pyrophosphokinase / Dihydropteroate synthase (TAIR:AT1G69190.1). & (gnl|cdd|37755 : 638.0) no description available & (gnl|cdd|29545 : 314.0) no description available & (reliability: 1356.0) & (original description: Putative fol1, Description = Dihydropteroate synthase, PFAM = PF01288;PF00809)' T '25.3' 'C1-metabolism.dihydropteridine diphosphokinase' 'niben101scf02151_523991-527562' '(at4g30000 : 678.0) Dihydropterin pyrophosphokinase / Dihydropteroate synthase; FUNCTIONS IN: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity, dihydropteroate synthase activity; INVOLVED IN: pteridine and derivative metabolic process, cellular metabolic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dihydropteroate synthase-like (InterPro:IPR011005), 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK (InterPro:IPR000550), Dihydropteroate synthase (InterPro:IPR006390), Pterin-binding (InterPro:IPR000489); BEST Arabidopsis thaliana protein match is: Dihydropterin pyrophosphokinase / Dihydropteroate synthase (TAIR:AT1G69190.1). & (gnl|cdd|37755 : 638.0) no description available & (gnl|cdd|29545 : 314.0) no description available & (reliability: 1356.0) & (original description: Putative fol1, Description = Dihydropteroate synthase, PFAM = PF01288;PF00809)' T '25.4' 'C1-metabolism.5-formyltetrahydrofolate cyclo-ligase' 'nbv0.3scaffold46237_12477-16647' '(at1g76730 : 478.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: catalytic activity, ATP binding, 5-formyltetrahydrofolate cyclo-ligase activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 5-formyltetrahydrofolate cyclo-ligase (InterPro:IPR002698); Has 415 Blast hits to 415 proteins in 174 species: Archae - 92; Bacteria - 129; Metazoa - 119; Fungi - 6; Plants - 46; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|39611 : 365.0) no description available & (gnl|cdd|85693 : 115.0) no description available & (reliability: 956.0) & (original description: Putative fcl2, Description = 5-formyltetrahydrofolate cyclo-ligase, PFAM = PF01812)' T '25.4' 'C1-metabolism.5-formyltetrahydrofolate cyclo-ligase' 'nbv0.3scaffold75175_1671-7320' '(at5g13050 : 286.0) 5-Formyltetrahydrofolate cycloligase (5-CHO-THF cycloligase - AT5G13050.1) regulates/influences under photorespiratory conditions the activity of another gene product, i.e. serine hydroxymethyltransferase (SHMT) due to accumulating amounts of 5-Formyltetrahydrofolate; 5-formyltetrahydrofolate cycloligase (5-FCL); CONTAINS InterPro DOMAIN/s: 5-formyltetrahydrofolate cyclo-ligase (InterPro:IPR002698); Has 1110 Blast hits to 1110 proteins in 558 species: Archae - 4; Bacteria - 853; Metazoa - 105; Fungi - 55; Plants - 43; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|38303 : 204.0) no description available & (gnl|cdd|85693 : 125.0) no description available & (reliability: 572.0) & (original description: Putative 5FCL, Description = 5-formyltetrahydrofolate cyclo-ligase, mitochondrial, PFAM = PF01812)' T '25.4' 'C1-metabolism.5-formyltetrahydrofolate cyclo-ligase' 'niben044scf00028255ctg015_1-2711' '(at5g13050 : 124.0) 5-Formyltetrahydrofolate cycloligase (5-CHO-THF cycloligase - AT5G13050.1) regulates/influences under photorespiratory conditions the activity of another gene product, i.e. serine hydroxymethyltransferase (SHMT) due to accumulating amounts of 5-Formyltetrahydrofolate; 5-formyltetrahydrofolate cycloligase (5-FCL); CONTAINS InterPro DOMAIN/s: 5-formyltetrahydrofolate cyclo-ligase (InterPro:IPR002698); Has 1110 Blast hits to 1110 proteins in 558 species: Archae - 4; Bacteria - 853; Metazoa - 105; Fungi - 55; Plants - 43; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|38303 : 100.0) no description available & (reliability: 248.0) & (original description: Putative 5FCL, Description = 5-formyltetrahydrofolate cyclo-ligase, PFAM = PF01812)' T '25.4' 'C1-metabolism.5-formyltetrahydrofolate cyclo-ligase' 'niben044scf00053269ctg004_11203-16852' '(at5g13050 : 287.0) 5-Formyltetrahydrofolate cycloligase (5-CHO-THF cycloligase - AT5G13050.1) regulates/influences under photorespiratory conditions the activity of another gene product, i.e. serine hydroxymethyltransferase (SHMT) due to accumulating amounts of 5-Formyltetrahydrofolate; 5-formyltetrahydrofolate cycloligase (5-FCL); CONTAINS InterPro DOMAIN/s: 5-formyltetrahydrofolate cyclo-ligase (InterPro:IPR002698); Has 1110 Blast hits to 1110 proteins in 558 species: Archae - 4; Bacteria - 853; Metazoa - 105; Fungi - 55; Plants - 43; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|38303 : 205.0) no description available & (gnl|cdd|85693 : 125.0) no description available & (reliability: 574.0) & (original description: Putative 5FCL, Description = 5-formyltetrahydrofolate cyclo-ligase, mitochondrial, PFAM = PF01812)' T '25.4' 'C1-metabolism.5-formyltetrahydrofolate cyclo-ligase' 'niben101scf00024_55589-65667' '(at5g13050 : 291.0) 5-Formyltetrahydrofolate cycloligase (5-CHO-THF cycloligase - AT5G13050.1) regulates/influences under photorespiratory conditions the activity of another gene product, i.e. serine hydroxymethyltransferase (SHMT) due to accumulating amounts of 5-Formyltetrahydrofolate; 5-formyltetrahydrofolate cycloligase (5-FCL); CONTAINS InterPro DOMAIN/s: 5-formyltetrahydrofolate cyclo-ligase (InterPro:IPR002698); Has 1110 Blast hits to 1110 proteins in 558 species: Archae - 4; Bacteria - 853; Metazoa - 105; Fungi - 55; Plants - 43; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|38303 : 211.0) no description available & (gnl|cdd|85693 : 123.0) no description available & (reliability: 582.0) & (original description: Putative 5FCL, Description = 5-formyltetrahydrofolate cyclo-ligase, PFAM = PF01812)' T '25.4' 'C1-metabolism.5-formyltetrahydrofolate cyclo-ligase' 'niben101scf00425_291244-296797' '(at5g13050 : 309.0) 5-Formyltetrahydrofolate cycloligase (5-CHO-THF cycloligase - AT5G13050.1) regulates/influences under photorespiratory conditions the activity of another gene product, i.e. serine hydroxymethyltransferase (SHMT) due to accumulating amounts of 5-Formyltetrahydrofolate; 5-formyltetrahydrofolate cycloligase (5-FCL); CONTAINS InterPro DOMAIN/s: 5-formyltetrahydrofolate cyclo-ligase (InterPro:IPR002698); Has 1110 Blast hits to 1110 proteins in 558 species: Archae - 4; Bacteria - 853; Metazoa - 105; Fungi - 55; Plants - 43; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|38303 : 211.0) no description available & (gnl|cdd|30561 : 116.0) no description available & (reliability: 618.0) & (original description: Putative 5FCL, Description = 5-formyltetrahydrofolate cyclo-ligase, mitochondrial, PFAM = PF01812)' T '25.4' 'C1-metabolism.5-formyltetrahydrofolate cyclo-ligase' 'niben101scf11884_52003-57652' '(at5g13050 : 257.0) 5-Formyltetrahydrofolate cycloligase (5-CHO-THF cycloligase - AT5G13050.1) regulates/influences under photorespiratory conditions the activity of another gene product, i.e. serine hydroxymethyltransferase (SHMT) due to accumulating amounts of 5-Formyltetrahydrofolate; 5-formyltetrahydrofolate cycloligase (5-FCL); CONTAINS InterPro DOMAIN/s: 5-formyltetrahydrofolate cyclo-ligase (InterPro:IPR002698); Has 1110 Blast hits to 1110 proteins in 558 species: Archae - 4; Bacteria - 853; Metazoa - 105; Fungi - 55; Plants - 43; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|38303 : 180.0) no description available & (gnl|cdd|85693 : 113.0) no description available & (reliability: 514.0) & (original description: Putative 5FCL, Description = 5-formyltetrahydrofolate cyclo-ligase, PFAM = PF01812)' T '25.4' 'C1-metabolism.5-formyltetrahydrofolate cyclo-ligase' 'niben101scf12033_12783-18381' '(at1g76730 : 385.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: catalytic activity, ATP binding, 5-formyltetrahydrofolate cyclo-ligase activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 5-formyltetrahydrofolate cyclo-ligase (InterPro:IPR002698); Has 415 Blast hits to 415 proteins in 174 species: Archae - 92; Bacteria - 129; Metazoa - 119; Fungi - 6; Plants - 46; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|39611 : 281.0) no description available & (gnl|cdd|85693 : 88.5) no description available & (reliability: 770.0) & (original description: Putative fcl2, Description = 5-formyltetrahydrofolate cyclo-ligase, PFAM = PF01812)' T '25.5' 'C1-metabolism.Methylenetetrahydrofolate dehydrogenase & Methenyltetrahydrofolate cyclohydrolase' 'nbv0.3scaffold2893_405-5150' '(at4g00620 : 498.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site (InterPro:IPR020867), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35312 : 403.0) no description available & (gnl|cdd|30539 : 373.0) no description available & (reliability: 996.0) & (original description: Putative FOLD4, Description = Bifunctional protein FolD 4, chloroplastic, PFAM = PF02882;PF00763)' T '25.5' 'C1-metabolism.Methylenetetrahydrofolate dehydrogenase & Methenyltetrahydrofolate cyclohydrolase' 'nbv0.3scaffold64854_336-5734' '(at3g12290 : 461.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site (InterPro:IPR020867), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00620.1); Has 9969 Blast hits to 9964 proteins in 2781 species: Archae - 105; Bacteria - 5648; Metazoa - 394; Fungi - 308; Plants - 157; Viruses - 0; Other Eukaryotes - 3357 (source: NCBI BLink). & (gnl|cdd|35312 : 379.0) no description available & (gnl|cdd|30539 : 371.0) no description available & (reliability: 922.0) & (original description: Putative FOLD2, Description = Bifunctional protein FolD 2, PFAM = PF00763;PF02882)' T '25.5' 'C1-metabolism.Methylenetetrahydrofolate dehydrogenase & Methenyltetrahydrofolate cyclohydrolase' 'nbv0.5scaffold6392_38069-43152' '(at2g38660 : 347.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00620.1). & (gnl|cdd|35312 : 318.0) no description available & (gnl|cdd|30539 : 310.0) no description available & (reliability: 694.0) & (original description: Putative FOLD1, Description = Bifunctional protein FolD 1, mitochondrial, PFAM = PF00763;PF02882)' T '25.5' 'C1-metabolism.Methylenetetrahydrofolate dehydrogenase & Methenyltetrahydrofolate cyclohydrolase' 'niben044scf00006963ctg004_6631-11210' '(at2g38660 : 432.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00620.1). & (gnl|cdd|35312 : 354.0) no description available & (gnl|cdd|30539 : 337.0) no description available & (reliability: 864.0) & (original description: Putative FOLD1, Description = Bifunctional protein FolD 1, mitochondrial, PFAM = PF02882;PF00763)' T '25.5' 'C1-metabolism.Methylenetetrahydrofolate dehydrogenase & Methenyltetrahydrofolate cyclohydrolase' 'niben044scf00044059ctg000_38689-47166' '(at2g38660 : 363.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00620.1). & (gnl|cdd|35312 : 320.0) no description available & (gnl|cdd|30539 : 313.0) no description available & (reliability: 726.0) & (original description: Putative folD, Description = Bifunctional protein FolD, PFAM = PF02882;PF00763)' T '25.5' 'C1-metabolism.Methylenetetrahydrofolate dehydrogenase & Methenyltetrahydrofolate cyclohydrolase' 'niben101scf03143_1122192-1126492' '(at3g12290 : 325.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site (InterPro:IPR020867), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00620.1); Has 9969 Blast hits to 9964 proteins in 2781 species: Archae - 105; Bacteria - 5648; Metazoa - 394; Fungi - 308; Plants - 157; Viruses - 0; Other Eukaryotes - 3357 (source: NCBI BLink). & (gnl|cdd|30539 : 275.0) no description available & (gnl|cdd|39431 : 272.0) no description available & (reliability: 650.0) & (original description: Putative folD, Description = Bifunctional protein FolD, PFAM = PF02882;PF00763)' T '25.5' 'C1-metabolism.Methylenetetrahydrofolate dehydrogenase & Methenyltetrahydrofolate cyclohydrolase' 'niben101scf03370_561805-566916' '(at3g12290 : 450.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site (InterPro:IPR020867), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00620.1); Has 9969 Blast hits to 9964 proteins in 2781 species: Archae - 105; Bacteria - 5648; Metazoa - 394; Fungi - 308; Plants - 157; Viruses - 0; Other Eukaryotes - 3357 (source: NCBI BLink). & (gnl|cdd|35312 : 371.0) no description available & (gnl|cdd|30539 : 360.0) no description available & (reliability: 900.0) & (original description: Putative FOLD2, Description = Bifunctional protein FolD 2, PFAM = PF00763;PF02882)' T '25.5' 'C1-metabolism.Methylenetetrahydrofolate dehydrogenase & Methenyltetrahydrofolate cyclohydrolase' 'niben101scf03714_315531-320737' '(at2g38660 : 418.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00620.1). & (gnl|cdd|35312 : 344.0) no description available & (gnl|cdd|30539 : 322.0) no description available & (reliability: 836.0) & (original description: Putative FOLD1, Description = Bifunctional protein FolD 1, mitochondrial, PFAM = PF02882;PF02882;PF00763)' T '25.5' 'C1-metabolism.Methylenetetrahydrofolate dehydrogenase & Methenyltetrahydrofolate cyclohydrolase' 'niben101scf03805_6346-10811' '(at2g38660 : 169.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00620.1). & (gnl|cdd|35312 : 155.0) no description available & (gnl|cdd|86164 : 152.0) no description available & (reliability: 338.0) & (original description: Putative folD, Description = C-1-tetrahydrofolate synthase, cytoplasmic, PFAM = PF02882)' T '25.5' 'C1-metabolism.Methylenetetrahydrofolate dehydrogenase & Methenyltetrahydrofolate cyclohydrolase' 'niben101scf03805_8004-23836' '(at2g38660 : 360.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00620.1). & (gnl|cdd|35312 : 320.0) no description available & (gnl|cdd|30539 : 305.0) no description available & (reliability: 720.0) & (original description: Putative folD, Description = Bifunctional protein FolD, PFAM = PF02882;PF00763)' T '25.5' 'C1-metabolism.Methylenetetrahydrofolate dehydrogenase & Methenyltetrahydrofolate cyclohydrolase' 'niben101scf07168_190968-195746' '(at4g00620 : 495.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site (InterPro:IPR020867), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35312 : 403.0) no description available & (gnl|cdd|30539 : 374.0) no description available & (reliability: 990.0) & (original description: Putative FOLD4, Description = Bifunctional protein FolD 4, chloroplastic, PFAM = PF00763;PF02882)' T '25.6' 'C1-metabolism.methylenetetrahydrofolate reductase' 'nbv0.3scaffold28955_833-9395' '(q75he6|mthr_orysa : 1071.0) Probable methylenetetrahydrofolate reductase (EC 1.5.1.20) - Oryza sativa (Rice) & (at2g44160 : 1043.0) methylenetetrahydrofolate reductase MTHFR2 mRNA, complete; methylenetetrahydrofolate reductase 2 (MTHFR2); FUNCTIONS IN: methylenetetrahydrofolate reductase (NADPH) activity; INVOLVED IN: oxidation reduction, methionine metabolic process; EXPRESSED IN: male gametophyte, guard cell, cultured cell, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Methylenetetrahydrofolate reductase (InterPro:IPR003171), Eukaryotic-type methylenetetrahydrofolate reductase (InterPro:IPR004621); BEST Arabidopsis thaliana protein match is: methylenetetrahydrofolate reductase 1 (TAIR:AT3G59970.3); Has 4605 Blast hits to 4574 proteins in 1845 species: Archae - 16; Bacteria - 3444; Metazoa - 135; Fungi - 300; Plants - 75; Viruses - 0; Other Eukaryotes - 635 (source: NCBI BLink). & (gnl|cdd|35784 : 843.0) no description available & (gnl|cdd|85914 : 410.0) no description available & (reliability: 2086.0) & (original description: Putative MTHFR, Description = Methylenetetrahydrofolate reductase, PFAM = PF02219)' T '25.6' 'C1-metabolism.methylenetetrahydrofolate reductase' 'niben101scf05848_394523-406573' '(q75he6|mthr_orysa : 1076.0) Probable methylenetetrahydrofolate reductase (EC 1.5.1.20) - Oryza sativa (Rice) & (at3g59970 : 1048.0) methylenetetrahydrofolate reductase MTHFR1 mRNA, complete; methylenetetrahydrofolate reductase 1 (MTHFR1); FUNCTIONS IN: methylenetetrahydrofolate reductase (NADPH) activity; INVOLVED IN: oxidation reduction, methionine metabolic process; EXPRESSED IN: fruit, guard cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Methylenetetrahydrofolate reductase (InterPro:IPR003171), Eukaryotic-type methylenetetrahydrofolate reductase (InterPro:IPR004621); BEST Arabidopsis thaliana protein match is: methylenetetrahydrofolate reductase 2 (TAIR:AT2G44160.1); Has 4753 Blast hits to 4742 proteins in 1927 species: Archae - 14; Bacteria - 3601; Metazoa - 134; Fungi - 280; Plants - 73; Viruses - 0; Other Eukaryotes - 651 (source: NCBI BLink). & (gnl|cdd|35784 : 848.0) no description available & (gnl|cdd|85914 : 410.0) no description available & (reliability: 2096.0) & (original description: Putative met9, Description = Methylenetetrahydrofolate reductase, PFAM = PF02219)' T '25.6' 'C1-metabolism.methylenetetrahydrofolate reductase' 'niben101scf24238_20609-29754' '(q9se94|mthr1_maize : 1057.0) Methylenetetrahydrofolate reductase 1 (EC 1.5.1.20) (ZmMTHFR1) - Zea mays (Maize) & (at2g44160 : 1055.0) methylenetetrahydrofolate reductase MTHFR2 mRNA, complete; methylenetetrahydrofolate reductase 2 (MTHFR2); FUNCTIONS IN: methylenetetrahydrofolate reductase (NADPH) activity; INVOLVED IN: oxidation reduction, methionine metabolic process; EXPRESSED IN: male gametophyte, guard cell, cultured cell, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Methylenetetrahydrofolate reductase (InterPro:IPR003171), Eukaryotic-type methylenetetrahydrofolate reductase (InterPro:IPR004621); BEST Arabidopsis thaliana protein match is: methylenetetrahydrofolate reductase 1 (TAIR:AT3G59970.3); Has 4605 Blast hits to 4574 proteins in 1845 species: Archae - 16; Bacteria - 3444; Metazoa - 135; Fungi - 300; Plants - 75; Viruses - 0; Other Eukaryotes - 635 (source: NCBI BLink). & (gnl|cdd|35784 : 848.0) no description available & (gnl|cdd|85914 : 409.0) no description available & (reliability: 2110.0) & (original description: Putative MTHFR2, Description = Methylenetetrahydrofolate reductase 2, PFAM = PF02219)' T '25.7' 'C1-metabolism.GTP cyclohydrolase I' 'niben101scf06956_1585-5740' '(at3g07270 : 553.0) GTP cyclohydrolase I; CONTAINS InterPro DOMAIN/s: GTP cyclohydrolase I/Nitrile oxidoreductase (InterPro:IPR020602); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37909 : 221.0) no description available & (gnl|cdd|82943 : 152.0) no description available & (reliability: 1106.0) & (original description: Putative GCH1, Description = GTP cyclohydrolase 1, PFAM = PF01227;PF01227)' T '25.7' 'C1-metabolism.GTP cyclohydrolase I' 'niben101scf07428_230095-234682' '(at3g07270 : 550.0) GTP cyclohydrolase I; CONTAINS InterPro DOMAIN/s: GTP cyclohydrolase I/Nitrile oxidoreductase (InterPro:IPR020602); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37909 : 216.0) no description available & (gnl|cdd|82943 : 156.0) no description available & (reliability: 1100.0) & (original description: Putative GCH1, Description = GTP cyclohydrolase 1, PFAM = PF01227;PF01227)' T '25.8' 'C1-metabolism.tetrahydrofolate synthase' 'nbv0.3scaffold19380_1825-19689' '(at5g05980 : 677.0) DHFS-FPGS homolog B (DFB); CONTAINS InterPro DOMAIN/s: Folylpolyglutamate synthetase, conserved site (InterPro:IPR018109), Mur ligase, central (InterPro:IPR013221), Mur ligase, C-terminal (InterPro:IPR004101), Folylpolyglutamate synthetase (InterPro:IPR001645); BEST Arabidopsis thaliana protein match is: DHFS-FPGS homolog D (TAIR:AT3G55630.3); Has 7710 Blast hits to 7708 proteins in 2543 species: Archae - 43; Bacteria - 4850; Metazoa - 165; Fungi - 360; Plants - 132; Viruses - 0; Other Eukaryotes - 2160 (source: NCBI BLink). & (gnl|cdd|37736 : 529.0) no description available & (gnl|cdd|30633 : 266.0) no description available & (reliability: 1354.0) & (original description: Putative DFB, Description = Folylpoly-gamma-glutamate synthetase, PFAM = PF08245)' T '25.8' 'C1-metabolism.tetrahydrofolate synthase' 'nbv0.3scaffold76218_132-7920' '(at3g10160 : 491.0) Encodes a protein with tetrahydrofolylpolyglutamate synthase activity that is located in the mitochondrial matrix.; DHFS-FPGS homolog C (DFC); CONTAINS InterPro DOMAIN/s: Mur ligase, central (InterPro:IPR013221), Folylpolyglutamate synthetase, conserved site (InterPro:IPR018109), Mur ligase, C-terminal (InterPro:IPR004101), Folylpolyglutamate synthetase (InterPro:IPR001645); BEST Arabidopsis thaliana protein match is: DHFS-FPGS homolog B (TAIR:AT5G05980.2); Has 7721 Blast hits to 7719 proteins in 2542 species: Archae - 43; Bacteria - 4847; Metazoa - 165; Fungi - 368; Plants - 133; Viruses - 0; Other Eukaryotes - 2165 (source: NCBI BLink). & (gnl|cdd|37736 : 318.0) no description available & (gnl|cdd|30633 : 152.0) no description available & (reliability: 982.0) & (original description: Putative DFB, Description = Folylpoly-gamma-glutamate synthetase, PFAM = )' T '25.8' 'C1-metabolism.tetrahydrofolate synthase' 'nbv0.3scaffold84760_1-4817' '(at3g10160 : 313.0) Encodes a protein with tetrahydrofolylpolyglutamate synthase activity that is located in the mitochondrial matrix.; DHFS-FPGS homolog C (DFC); CONTAINS InterPro DOMAIN/s: Mur ligase, central (InterPro:IPR013221), Folylpolyglutamate synthetase, conserved site (InterPro:IPR018109), Mur ligase, C-terminal (InterPro:IPR004101), Folylpolyglutamate synthetase (InterPro:IPR001645); BEST Arabidopsis thaliana protein match is: DHFS-FPGS homolog B (TAIR:AT5G05980.2); Has 7721 Blast hits to 7719 proteins in 2542 species: Archae - 43; Bacteria - 4847; Metazoa - 165; Fungi - 368; Plants - 133; Viruses - 0; Other Eukaryotes - 2165 (source: NCBI BLink). & (gnl|cdd|37736 : 240.0) no description available & (gnl|cdd|30633 : 152.0) no description available & (reliability: 626.0) & (original description: Putative fpgs, Description = Folylpoly-gamma-glutamate synthetase, PFAM = )' T '25.8' 'C1-metabolism.tetrahydrofolate synthase' 'nbv0.5scaffold2901_140823-157085' '(at3g10160 : 619.0) Encodes a protein with tetrahydrofolylpolyglutamate synthase activity that is located in the mitochondrial matrix.; DHFS-FPGS homolog C (DFC); CONTAINS InterPro DOMAIN/s: Mur ligase, central (InterPro:IPR013221), Folylpolyglutamate synthetase, conserved site (InterPro:IPR018109), Mur ligase, C-terminal (InterPro:IPR004101), Folylpolyglutamate synthetase (InterPro:IPR001645); BEST Arabidopsis thaliana protein match is: DHFS-FPGS homolog B (TAIR:AT5G05980.2); Has 7721 Blast hits to 7719 proteins in 2542 species: Archae - 43; Bacteria - 4847; Metazoa - 165; Fungi - 368; Plants - 133; Viruses - 0; Other Eukaryotes - 2165 (source: NCBI BLink). & (gnl|cdd|37736 : 415.0) no description available & (gnl|cdd|30633 : 197.0) no description available & (reliability: 1238.0) & (original description: Putative FPGS2, Description = Folylpolyglutamate synthase, PFAM = )' T '25.8' 'C1-metabolism.tetrahydrofolate synthase' 'niben044scf00004562ctg015_4912-9380' '(at3g10160 : 140.0) Encodes a protein with tetrahydrofolylpolyglutamate synthase activity that is located in the mitochondrial matrix.; DHFS-FPGS homolog C (DFC); CONTAINS InterPro DOMAIN/s: Mur ligase, central (InterPro:IPR013221), Folylpolyglutamate synthetase, conserved site (InterPro:IPR018109), Mur ligase, C-terminal (InterPro:IPR004101), Folylpolyglutamate synthetase (InterPro:IPR001645); BEST Arabidopsis thaliana protein match is: DHFS-FPGS homolog B (TAIR:AT5G05980.2); Has 7721 Blast hits to 7719 proteins in 2542 species: Archae - 43; Bacteria - 4847; Metazoa - 165; Fungi - 368; Plants - 133; Viruses - 0; Other Eukaryotes - 2165 (source: NCBI BLink). & (gnl|cdd|37736 : 114.0) no description available & (gnl|cdd|30633 : 101.0) no description available & (reliability: 280.0) & (original description: Putative DFB, Description = Folylpoly-gamma-glutamate synthetase, PFAM = )' T '25.8' 'C1-metabolism.tetrahydrofolate synthase' 'niben101scf01966_336526-346402' '(at5g41480 : 487.0) Encodes a dihydrofolate synthetase based on yeast complementation experiments. This protein is involved in folate biosynthesis.; GLOBULAR ARREST1 (GLA1); FUNCTIONS IN: dihydrofolate synthase activity; INVOLVED IN: one-carbon metabolic process, embryo development ending in seed dormancy; LOCATED IN: mitochondrial matrix; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mur ligase, central (InterPro:IPR013221), Folylpolyglutamate synthetase, conserved site (InterPro:IPR018109), Mur ligase, C-terminal (InterPro:IPR004101), Folylpolyglutamate synthetase (InterPro:IPR001645); BEST Arabidopsis thaliana protein match is: DHFS-FPGS homolog B (TAIR:AT5G05980.2); Has 8245 Blast hits to 8243 proteins in 2505 species: Archae - 47; Bacteria - 5105; Metazoa - 156; Fungi - 354; Plants - 131; Viruses - 0; Other Eukaryotes - 2452 (source: NCBI BLink). & (gnl|cdd|30633 : 279.0) no description available & (gnl|cdd|37736 : 275.0) no description available & (reliability: 974.0) & (original description: Putative DHFS, Description = Dihydrofolate synthetase, PFAM = PF08245)' T '25.8' 'C1-metabolism.tetrahydrofolate synthase' 'niben101scf01966_340783-345633' '(at5g41480 : 301.0) Encodes a dihydrofolate synthetase based on yeast complementation experiments. This protein is involved in folate biosynthesis.; GLOBULAR ARREST1 (GLA1); FUNCTIONS IN: dihydrofolate synthase activity; INVOLVED IN: one-carbon metabolic process, embryo development ending in seed dormancy; LOCATED IN: mitochondrial matrix; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mur ligase, central (InterPro:IPR013221), Folylpolyglutamate synthetase, conserved site (InterPro:IPR018109), Mur ligase, C-terminal (InterPro:IPR004101), Folylpolyglutamate synthetase (InterPro:IPR001645); BEST Arabidopsis thaliana protein match is: DHFS-FPGS homolog B (TAIR:AT5G05980.2); Has 8245 Blast hits to 8243 proteins in 2505 species: Archae - 47; Bacteria - 5105; Metazoa - 156; Fungi - 354; Plants - 131; Viruses - 0; Other Eukaryotes - 2452 (source: NCBI BLink). & (gnl|cdd|30633 : 170.0) no description available & (gnl|cdd|37736 : 146.0) no description available & (reliability: 602.0) & (original description: Putative DFA, Description = Dihydrofolate synthetase/folylpolyglutamate synthetase, putative, expressed, PFAM = PF08245)' T '25.8' 'C1-metabolism.tetrahydrofolate synthase' 'niben101scf05574_333770-356713' '(at5g05980 : 689.0) DHFS-FPGS homolog B (DFB); CONTAINS InterPro DOMAIN/s: Folylpolyglutamate synthetase, conserved site (InterPro:IPR018109), Mur ligase, central (InterPro:IPR013221), Mur ligase, C-terminal (InterPro:IPR004101), Folylpolyglutamate synthetase (InterPro:IPR001645); BEST Arabidopsis thaliana protein match is: DHFS-FPGS homolog D (TAIR:AT3G55630.3); Has 7710 Blast hits to 7708 proteins in 2543 species: Archae - 43; Bacteria - 4850; Metazoa - 165; Fungi - 360; Plants - 132; Viruses - 0; Other Eukaryotes - 2160 (source: NCBI BLink). & (gnl|cdd|37736 : 537.0) no description available & (gnl|cdd|30633 : 270.0) no description available & (reliability: 1378.0) & (original description: Putative FPGS1, Description = Folylpolyglutamate synthase, PFAM = PF08245)' T '25.9' 'C1-metabolism.dihydroneopterin aldolase' 'nbv0.3scaffold44295_7516-11796' '(at3g11750 : 161.0) Encodes an enzyme that can act as a aldolase or an epimerase for 7,8-dihydroneopterin and 7,8-dihydromonapterin in vitro. It is likely to act in tetrahydrofolate biosynthesis in vivo.; FOLB1; FUNCTIONS IN: dihydroneopterin aldolase activity; INVOLVED IN: folic acid and derivative metabolic process; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Dihydroneopterin aldolase (InterPro:IPR006157), Dihydroneopterin aldolase subgroup (InterPro:IPR006156); BEST Arabidopsis thaliana protein match is: Dihydroneopterin aldolase (TAIR:AT5G62980.1); Has 3723 Blast hits to 3723 proteins in 1537 species: Archae - 4; Bacteria - 2961; Metazoa - 0; Fungi - 2; Plants - 88; Viruses - 0; Other Eukaryotes - 668 (source: NCBI BLink). & (gnl|cdd|29762 : 139.0) no description available & (reliability: 322.0) & (original description: Putative FOLB1, Description = Dihydroneopterin aldolase 1, PFAM = PF02152)' T '25.9' 'C1-metabolism.dihydroneopterin aldolase' 'nbv0.3scaffold44295_9649-13357' '(at5g62980 : 88.2) Encodes an enzyme that can act as a aldolase or an epimerase for 7,8-dihydroneopterin and 7,8-dihydromonapterin in vitro. It is likely to act in folate biosynthesis as a homooctamer in vivo.; FOLB2; FUNCTIONS IN: dihydroneopterin aldolase activity; INVOLVED IN: folic acid and derivative metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dihydroneopterin aldolase (InterPro:IPR006157), Dihydroneopterin aldolase subgroup (InterPro:IPR006156); BEST Arabidopsis thaliana protein match is: Dihydroneopterin aldolase (TAIR:AT3G11750.1); Has 2737 Blast hits to 2737 proteins in 1212 species: Archae - 4; Bacteria - 2338; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 307 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative FOLB1, Description = 7,8-dihydroneopterin aldolase, PFAM = PF02152)' T '25.9' 'C1-metabolism.dihydroneopterin aldolase' 'nbv0.3scaffold78892_2106-7387' '(at3g11750 : 132.0) Encodes an enzyme that can act as a aldolase or an epimerase for 7,8-dihydroneopterin and 7,8-dihydromonapterin in vitro. It is likely to act in tetrahydrofolate biosynthesis in vivo.; FOLB1; FUNCTIONS IN: dihydroneopterin aldolase activity; INVOLVED IN: folic acid and derivative metabolic process; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Dihydroneopterin aldolase (InterPro:IPR006157), Dihydroneopterin aldolase subgroup (InterPro:IPR006156); BEST Arabidopsis thaliana protein match is: Dihydroneopterin aldolase (TAIR:AT5G62980.1); Has 3723 Blast hits to 3723 proteins in 1537 species: Archae - 4; Bacteria - 2961; Metazoa - 0; Fungi - 2; Plants - 88; Viruses - 0; Other Eukaryotes - 668 (source: NCBI BLink). & (gnl|cdd|29762 : 118.0) no description available & (reliability: 264.0) & (original description: Putative folA, Description = 7,8-dihydroneopterin aldolase, PFAM = PF02152)' T '25.9' 'C1-metabolism.dihydroneopterin aldolase' 'nbv0.5scaffold1108_26065-31840' '(at3g11750 : 161.0) Encodes an enzyme that can act as a aldolase or an epimerase for 7,8-dihydroneopterin and 7,8-dihydromonapterin in vitro. It is likely to act in tetrahydrofolate biosynthesis in vivo.; FOLB1; FUNCTIONS IN: dihydroneopterin aldolase activity; INVOLVED IN: folic acid and derivative metabolic process; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Dihydroneopterin aldolase (InterPro:IPR006157), Dihydroneopterin aldolase subgroup (InterPro:IPR006156); BEST Arabidopsis thaliana protein match is: Dihydroneopterin aldolase (TAIR:AT5G62980.1); Has 3723 Blast hits to 3723 proteins in 1537 species: Archae - 4; Bacteria - 2961; Metazoa - 0; Fungi - 2; Plants - 88; Viruses - 0; Other Eukaryotes - 668 (source: NCBI BLink). & (gnl|cdd|29762 : 138.0) no description available & (reliability: 322.0) & (original description: Putative FOLB1, Description = Dihydroneopterin aldolase 1, PFAM = PF02152)' T '25.9' 'C1-metabolism.dihydroneopterin aldolase' 'niben101scf01634_186477-190232' '(at5g62980 : 88.2) Encodes an enzyme that can act as a aldolase or an epimerase for 7,8-dihydroneopterin and 7,8-dihydromonapterin in vitro. It is likely to act in folate biosynthesis as a homooctamer in vivo.; FOLB2; FUNCTIONS IN: dihydroneopterin aldolase activity; INVOLVED IN: folic acid and derivative metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dihydroneopterin aldolase (InterPro:IPR006157), Dihydroneopterin aldolase subgroup (InterPro:IPR006156); BEST Arabidopsis thaliana protein match is: Dihydroneopterin aldolase (TAIR:AT3G11750.1); Has 2737 Blast hits to 2737 proteins in 1212 species: Archae - 4; Bacteria - 2338; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 307 (source: NCBI BLink). & (gnl|cdd|31728 : 80.3) no description available & (reliability: 176.4) & (original description: Putative FOLB1, Description = 7,8-dihydroneopterin aldolase, PFAM = PF02152)' T '25.10' 'C1-metabolism.formate dehydrogenase' 'nbv0.5scaffold655_567214-573328' '(q07511|fdh_soltu : 751.0) Formate dehydrogenase, mitochondrial precursor (EC 1.2.1.2) (NAD-dependent formate dehydrogenase) (FDH) - Solanum tuberosum (Potato) & (at5g14780 : 622.0) Encodes a NAD-dependent formate dehydrogenase.; formate dehydrogenase (FDH); FUNCTIONS IN: NAD or NADH binding, binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, catalytic activity, cofactor binding; INVOLVED IN: response to cadmium ion, response to wounding; LOCATED IN: thylakoid, mitochondrion, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT1G17745.1); Has 28984 Blast hits to 28977 proteins in 2707 species: Archae - 468; Bacteria - 17844; Metazoa - 730; Fungi - 1196; Plants - 566; Viruses - 5; Other Eukaryotes - 8175 (source: NCBI BLink). & (gnl|cdd|82283 : 444.0) no description available & (gnl|cdd|35292 : 334.0) no description available & (reliability: 1244.0) & (original description: Putative FDH1, Description = Formate dehydrogenase, mitochondrial, PFAM = PF02826;PF00389)' T '25.10' 'C1-metabolism.formate dehydrogenase' 'niben101scf01091_48384-55196' '(q07511|fdh_soltu : 734.0) Formate dehydrogenase, mitochondrial precursor (EC 1.2.1.2) (NAD-dependent formate dehydrogenase) (FDH) - Solanum tuberosum (Potato) & (at5g14780 : 618.0) Encodes a NAD-dependent formate dehydrogenase.; formate dehydrogenase (FDH); FUNCTIONS IN: NAD or NADH binding, binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, catalytic activity, cofactor binding; INVOLVED IN: response to cadmium ion, response to wounding; LOCATED IN: thylakoid, mitochondrion, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT1G17745.1); Has 28984 Blast hits to 28977 proteins in 2707 species: Archae - 468; Bacteria - 17844; Metazoa - 730; Fungi - 1196; Plants - 566; Viruses - 5; Other Eukaryotes - 8175 (source: NCBI BLink). & (gnl|cdd|82283 : 442.0) no description available & (gnl|cdd|35292 : 335.0) no description available & (reliability: 1236.0) & (original description: Putative FDH1, Description = Formate dehydrogenase, mitochondrial, PFAM = PF00389;PF02826)' T '25.11' 'C1-metabolism.S-(hydroxymethyl)glutathione dehydrogenase & S-(hydroxymethyl)glutathione synthase' '' '' '26' 'misc' '' '' '26.1' 'misc.misc2' 'nbv0.3scaffold1255_75186-80614' '(at4g02340 : 223.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 22331 Blast hits to 22276 proteins in 1970 species: Archae - 173; Bacteria - 16575; Metazoa - 610; Fungi - 564; Plants - 630; Viruses - 11; Other Eukaryotes - 3768 (source: NCBI BLink). & (gnl|cdd|39380 : 208.0) no description available & (gnl|cdd|30941 : 97.1) no description available & (reliability: 446.0) & (original description: Putative eh3, Description = Epoxide hydrolase 3, PFAM = PF00561)' T '26.1' 'misc.misc2' 'nbv0.3scaffold11958_2633-13417' '(at4g19185 : 486.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G45370.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 936.0) & (original description: Putative At4g19185, Description = WAT1-related protein At4g19185, PFAM = PF00892;PF00892)' T '26.1' 'misc.misc2' 'nbv0.3scaffold18343_10257-20397' '(at3g23600 : 297.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38253 : 221.0) no description available & (q9zt66|e134_maize : 129.0) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) - Zea mays (Maize) & (gnl|cdd|30761 : 93.9) no description available & (reliability: 594.0) & (original description: Putative GLU, Description = Endo-1,31,4-beta-D-glucanase, PFAM = PF01738)' T '26.1' 'misc.misc2' 'nbv0.3scaffold33588_16623-21976' '(at1g73740 : 400.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, biosynthetic process, carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), Glycosyl transferase, family 28, C-terminal (InterPro:IPR007235); Has 7866 Blast hits to 7866 proteins in 2456 species: Archae - 0; Bacteria - 5567; Metazoa - 4; Fungi - 2; Plants - 34; Viruses - 0; Other Eukaryotes - 2259 (source: NCBI BLink). & (gnl|cdd|80731 : 294.0) no description available & (reliability: 800.0) & (original description: Putative murG, Description = UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase, PFAM = PF03033;PF04101)' T '26.1' 'misc.misc2' 'nbv0.3scaffold47158_524-5609' '(at3g23600 : 330.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38253 : 239.0) no description available & (q9zt66|e134_maize : 166.0) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) - Zea mays (Maize) & (gnl|cdd|30761 : 102.0) no description available & (reliability: 660.0) & (original description: Putative Os08g0238200, Description = Os08g0238200 protein, PFAM = PF01738)' T '26.1' 'misc.misc2' 'nbv0.3scaffold79558_1-4560' '(at3g23600 : 249.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38253 : 187.0) no description available & (q9zt66|e134_maize : 120.0) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) - Zea mays (Maize) & (gnl|cdd|30761 : 94.7) no description available & (reliability: 498.0) & (original description: Putative GLU, Description = Endo-1,31,4-beta-D-glucanase, PFAM = PF01738)' T '26.1' 'misc.misc2' 'nbv0.3scaffold85205_582-5884' '(at3g23600 : 231.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38253 : 178.0) no description available & (q9zt66|e134_maize : 82.8) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) - Zea mays (Maize) & (reliability: 462.0) & (original description: Putative GLU, Description = Endo-1,31,4-beta-D-glucanase, PFAM = PF01738)' T '26.1' 'misc.misc2' 'nbv0.5scaffold539_98912-104220' '(at3g23600 : 287.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38253 : 224.0) no description available & (q9zt66|e134_maize : 116.0) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) - Zea mays (Maize) & (gnl|cdd|30761 : 91.6) no description available & (reliability: 574.0) & (original description: Putative GLU, Description = GLU protein, PFAM = PF01738)' T '26.1' 'misc.misc2' 'nbv0.5scaffold691_469834-478156' '(at3g51000 : 182.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 19118 Blast hits to 19078 proteins in 1849 species: Archae - 110; Bacteria - 13477; Metazoa - 828; Fungi - 558; Plants - 614; Viruses - 8; Other Eukaryotes - 3523 (source: NCBI BLink). & (gnl|cdd|39380 : 177.0) no description available & (gnl|cdd|30941 : 85.9) no description available & (reliability: 364.0) & (original description: Putative eh3, Description = Epoxide hydrolase 3, PFAM = PF00561)' T '26.1' 'misc.misc2' 'nbv0.5scaffold1715_50294-56365' '(at4g02340 : 429.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 22331 Blast hits to 22276 proteins in 1970 species: Archae - 173; Bacteria - 16575; Metazoa - 610; Fungi - 564; Plants - 630; Viruses - 11; Other Eukaryotes - 3768 (source: NCBI BLink). & (gnl|cdd|39380 : 328.0) no description available & (gnl|cdd|81168 : 105.0) no description available & (reliability: 858.0) & (original description: Putative eh2, Description = Epoxide hydrolase 2, PFAM = PF00561)' T '26.1' 'misc.misc2' 'nbv0.5scaffold1873_77282-94301' '(at4g19185 : 439.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G45370.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 836.0) & (original description: Putative At4g19185, Description = WAT1-related protein At4g19185, PFAM = PF00892;PF00892)' T '26.1' 'misc.misc2' 'nbv0.5scaffold3136_123378-150261' '(at1g04580 : 1533.0) Encodes aldehyde oxidase AAO4 preferentially expressed in developing seeds.; aldehyde oxidase 4 (AO4); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: abscisic aldehyde oxidase 3 (TAIR:AT2G27150.2); Has 17858 Blast hits to 17128 proteins in 1274 species: Archae - 410; Bacteria - 10596; Metazoa - 1017; Fungi - 119; Plants - 281; Viruses - 0; Other Eukaryotes - 5435 (source: NCBI BLink). & (gnl|cdd|35651 : 1406.0) no description available & (q6z351|aldol_orysa : 1399.0) Putative aldehyde oxidase-like protein - Oryza sativa (Rice) & (gnl|cdd|86083 : 516.0) no description available & (reliability: 2982.0) & (original description: Putative AAO4, Description = Benzaldehyde dehydrogenase (NAD(+)), PFAM = PF00111;PF01799;PF02738;PF00941;PF01315;PF03450)' T '26.1' 'misc.misc2' 'nbv0.5scaffold3492_136952-147633' '(at4g25720 : 309.0) This locus encodes a protein with similarity to gamma-glutamylcyclotransferase that may be involved in catalyzing the formation of pyroglutate residue on proteins that have been post-translationally processed to reveal a glutamine at their N-terminus. Enzymatic assays to test the function of this protein were performed using a truncated form of the protein lacking a signal peptide that is most similar to the AT4G25720.1 protein model.; glutaminyl cyclase (QC); FUNCTIONS IN: glutaminyl-peptide cyclotransferase activity, catalytic activity; INVOLVED IN: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine cyclotransferase (InterPro:IPR007788), Nitrous oxide reductase, N-terminal (InterPro:IPR011045); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33616 : 189.0) no description available & (reliability: 618.0) & (original description: Putative XCV2519, Description = Glutamine cyclotransferase, PFAM = PF05096)' T '26.1' 'misc.misc2' 'nbv0.5scaffold4028_109241-114215' '(gnl|cdd|39380 : 110.0) no description available & (at3g51000 : 101.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 19118 Blast hits to 19078 proteins in 1849 species: Archae - 110; Bacteria - 13477; Metazoa - 828; Fungi - 558; Plants - 614; Viruses - 8; Other Eukaryotes - 3523 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative eh3, Description = Epoxide hydrolase-like protein, PFAM = PF00561)' T '26.1' 'misc.misc2' 'nbv0.5scaffold5315_44745-57523' '(at1g72190 : 303.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: homoserine biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT4G34200.1); Has 28327 Blast hits to 28320 proteins in 2696 species: Archae - 466; Bacteria - 17634; Metazoa - 719; Fungi - 1167; Plants - 499; Viruses - 5; Other Eukaryotes - 7837 (source: NCBI BLink). & (gnl|cdd|35292 : 134.0) no description available & (gnl|cdd|84741 : 122.0) no description available & (reliability: 606.0) & (original description: Putative 20, Description = D-isomer specific 2-hydroxyacid dehydrogenase family protein isoform 3, PFAM = PF02826;PF00389)' T '26.1' 'misc.misc2' 'niben044scf00006365ctg016_575-11033' '(at3g23600 : 180.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38253 : 143.0) no description available & (q9zt66|e134_maize : 87.0) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) - Zea mays (Maize) & (reliability: 360.0) & (original description: Putative GLU, Description = Endo-1,3-1,4-beta-D-glucanase-like protein, PFAM = PF01738)' T '26.1' 'misc.misc2' 'niben044scf00006365ctg016_741-11191' '(at3g23600 : 280.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38253 : 209.0) no description available & (q9zt66|e134_maize : 111.0) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) - Zea mays (Maize) & (gnl|cdd|30761 : 90.4) no description available & (reliability: 560.0) & (original description: Putative GLU, Description = Endo-1,31,4-beta-D-glucanase, PFAM = PF01738)' T '26.1' 'misc.misc2' 'niben044scf00007921ctg008_2562-8575' '(at1g72190 : 267.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: homoserine biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT4G34200.1); Has 28327 Blast hits to 28320 proteins in 2696 species: Archae - 466; Bacteria - 17634; Metazoa - 719; Fungi - 1167; Plants - 499; Viruses - 5; Other Eukaryotes - 7837 (source: NCBI BLink). & (gnl|cdd|35292 : 140.0) no description available & (gnl|cdd|84741 : 136.0) no description available & (reliability: 534.0) & (original description: Putative 20, Description = D-isomer specific 2-hydroxyacid dehydrogenase family protein isoform 3, PFAM = PF00389;PF02826)' T '26.1' 'misc.misc2' 'niben044scf00030870ctg001_1086-4871' '(at3g51000 : 209.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 19118 Blast hits to 19078 proteins in 1849 species: Archae - 110; Bacteria - 13477; Metazoa - 828; Fungi - 558; Plants - 614; Viruses - 8; Other Eukaryotes - 3523 (source: NCBI BLink). & (gnl|cdd|39380 : 207.0) no description available & (gnl|cdd|30941 : 100.0) no description available & (reliability: 418.0) & (original description: Putative eh3, Description = Epoxide hydrolase 3, PFAM = PF00561)' T '26.1' 'misc.misc2' 'niben044scf00047303ctg004_25063-30675' '(at3g18270 : 520.0) a cytochrome P450 pseudogene. the second half of the gene overlaps perfectly with the other gene model.; "cytochrome P450, family 77, subfamily A, polypeptide 5 pseudogene" (CYP77A5P); FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mandelate racemase/muconate lactonizing enzyme, N-terminal (InterPro:IPR013341), Mandelate racemase/muconate lactonizing enzyme (InterPro:IPR001354), Mandelate racemase/muconate lactonizing enzyme, C-terminal (InterPro:IPR013342); BEST Arabidopsis thaliana protein match is: magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases (TAIR:AT1G68890.1); Has 7895 Blast hits to 7895 proteins in 1549 species: Archae - 251; Bacteria - 5761; Metazoa - 71; Fungi - 140; Plants - 48; Viruses - 0; Other Eukaryotes - 1624 (source: NCBI BLink). & (gnl|cdd|48194 : 310.0) no description available & (reliability: 1040.0) & (original description: Putative sce2857, Description = L-Ala-D/L-Glu epimerase, PFAM = PF02746;PF13378)' T '26.1' 'misc.misc2' 'niben101scf00120_278844-283818' '(gnl|cdd|39380 : 195.0) no description available & (at3g51000 : 191.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 19118 Blast hits to 19078 proteins in 1849 species: Archae - 110; Bacteria - 13477; Metazoa - 828; Fungi - 558; Plants - 614; Viruses - 8; Other Eukaryotes - 3523 (source: NCBI BLink). & (gnl|cdd|30941 : 90.5) no description available & (reliability: 382.0) & (original description: Putative eh3, Description = Epoxide hydrolase 3, PFAM = PF00561)' T '26.1' 'misc.misc2' 'niben101scf00151_895588-905063' '(at2g27150 : 1563.0) Encodes the aldehyde oxidase delta isoform catalyzing the final step in abscisic acid biosynthesis.; abscisic aldehyde oxidase 3 (AAO3); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: aldehyde oxidase 4 (TAIR:AT1G04580.1); Has 18285 Blast hits to 17524 proteins in 1277 species: Archae - 409; Bacteria - 10745; Metazoa - 1018; Fungi - 113; Plants - 280; Viruses - 0; Other Eukaryotes - 5720 (source: NCBI BLink). & (q6z351|aldol_orysa : 1447.0) Putative aldehyde oxidase-like protein - Oryza sativa (Rice) & (gnl|cdd|35651 : 1443.0) no description available & (gnl|cdd|86083 : 563.0) no description available & (reliability: 3048.0) & (original description: Putative AAO4, Description = Benzaldehyde dehydrogenase (NAD(+)), PFAM = PF00111;PF02738;PF03450;PF01315;PF01799;PF00941)' T '26.1' 'misc.misc2' 'niben101scf00369_1825547-1830923' '(at3g05600 : 439.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G02340.1); Has 14882 Blast hits to 14851 proteins in 1621 species: Archae - 134; Bacteria - 10471; Metazoa - 578; Fungi - 458; Plants - 569; Viruses - 1; Other Eukaryotes - 2671 (source: NCBI BLink). & (gnl|cdd|39380 : 354.0) no description available & (gnl|cdd|81168 : 104.0) no description available & (reliability: 878.0) & (original description: Putative eh1, Description = Epoxide hydrolase 1, PFAM = PF00561)' T '26.1' 'misc.misc2' 'niben101scf00428_793271-799220' '(at3g18270 : 515.0) a cytochrome P450 pseudogene. the second half of the gene overlaps perfectly with the other gene model.; "cytochrome P450, family 77, subfamily A, polypeptide 5 pseudogene" (CYP77A5P); FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mandelate racemase/muconate lactonizing enzyme, N-terminal (InterPro:IPR013341), Mandelate racemase/muconate lactonizing enzyme (InterPro:IPR001354), Mandelate racemase/muconate lactonizing enzyme, C-terminal (InterPro:IPR013342); BEST Arabidopsis thaliana protein match is: magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases (TAIR:AT1G68890.1); Has 7895 Blast hits to 7895 proteins in 1549 species: Archae - 251; Bacteria - 5761; Metazoa - 71; Fungi - 140; Plants - 48; Viruses - 0; Other Eukaryotes - 1624 (source: NCBI BLink). & (gnl|cdd|48194 : 308.0) no description available & (reliability: 1030.0) & (original description: Putative sce2857, Description = Mandelate racemase/muconate lactonizing protein, PFAM = PF02746;PF13378)' T '26.1' 'misc.misc2' 'niben101scf00640_514499-530502' '(gnl|cdd|39380 : 210.0) no description available & (at4g02340 : 206.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 22331 Blast hits to 22276 proteins in 1970 species: Archae - 173; Bacteria - 16575; Metazoa - 610; Fungi - 564; Plants - 630; Viruses - 11; Other Eukaryotes - 3768 (source: NCBI BLink). & (gnl|cdd|30941 : 95.9) no description available & (reliability: 412.0) & (original description: Putative eh3, Description = Epoxide hydrolase 3, PFAM = PF00561)' T '26.1' 'misc.misc2' 'niben101scf00851_507815-519036' '(at1g04580 : 1540.0) Encodes aldehyde oxidase AAO4 preferentially expressed in developing seeds.; aldehyde oxidase 4 (AO4); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: abscisic aldehyde oxidase 3 (TAIR:AT2G27150.2); Has 17858 Blast hits to 17128 proteins in 1274 species: Archae - 410; Bacteria - 10596; Metazoa - 1017; Fungi - 119; Plants - 281; Viruses - 0; Other Eukaryotes - 5435 (source: NCBI BLink). & (gnl|cdd|35651 : 1446.0) no description available & (q852m2|aldo3_orysa : 1436.0) Probable aldehyde oxidase 3 (EC 1.2.3.1) (AO-3) - Oryza sativa (Rice) & (gnl|cdd|86083 : 562.0) no description available & (reliability: 3036.0) & (original description: Putative AAO4, Description = Benzaldehyde dehydrogenase (NAD(+)), PFAM = PF02738;PF01315;PF01799;PF00111;PF00941;PF03450)' T '26.1' 'misc.misc2' 'niben101scf00934_190895-201043' '(at3g23600 : 200.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38253 : 157.0) no description available & (q9zt66|e134_maize : 105.0) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) - Zea mays (Maize) & (reliability: 400.0) & (original description: Putative GLU, Description = Endo-1,3-1,4-beta-D-glucanase-like protein, PFAM = PF01738)' T '26.1' 'misc.misc2' 'niben101scf00934_192465-201201' '(at3g23600 : 296.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38253 : 222.0) no description available & (q9zt66|e134_maize : 129.0) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) - Zea mays (Maize) & (gnl|cdd|30761 : 95.1) no description available & (reliability: 592.0) & (original description: Putative GLU, Description = GLU protein, PFAM = PF01738)' T '26.1' 'misc.misc2' 'niben101scf01181_395021-400380' '(at3g18270 : 516.0) a cytochrome P450 pseudogene. the second half of the gene overlaps perfectly with the other gene model.; "cytochrome P450, family 77, subfamily A, polypeptide 5 pseudogene" (CYP77A5P); FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mandelate racemase/muconate lactonizing enzyme, N-terminal (InterPro:IPR013341), Mandelate racemase/muconate lactonizing enzyme (InterPro:IPR001354), Mandelate racemase/muconate lactonizing enzyme, C-terminal (InterPro:IPR013342); BEST Arabidopsis thaliana protein match is: magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases (TAIR:AT1G68890.1); Has 7895 Blast hits to 7895 proteins in 1549 species: Archae - 251; Bacteria - 5761; Metazoa - 71; Fungi - 140; Plants - 48; Viruses - 0; Other Eukaryotes - 1624 (source: NCBI BLink). & (gnl|cdd|48194 : 311.0) no description available & (reliability: 1032.0) & (original description: Putative sce2857, Description = L-Ala-D/L-Glu epimerase, PFAM = PF13378;PF02746)' T '26.1' 'misc.misc2' 'niben101scf01413_173471-178611' '(at4g21580 : 483.0) oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity, zinc ion binding; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Quinone oxidoreductase putative, PIG3 (InterPro:IPR014189), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding alcohol dehydrogenase family protein (TAIR:AT5G61510.1); Has 44345 Blast hits to 44175 proteins in 2827 species: Archae - 637; Bacteria - 28883; Metazoa - 1910; Fungi - 3863; Plants - 1554; Viruses - 0; Other Eukaryotes - 7498 (source: NCBI BLink). & (gnl|cdd|30949 : 292.0) no description available & (gnl|cdd|36412 : 245.0) no description available & (q8h0m1|qorh_spiol : 83.6) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) & (reliability: 966.0) & (original description: Putative ppsC, Description = NADPH:quinone oxidoreductase, PFAM = PF08240;PF00107)' T '26.1' 'misc.misc2' 'niben101scf01628_255550-266089' '(at3g05600 : 439.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G02340.1); Has 14882 Blast hits to 14851 proteins in 1621 species: Archae - 134; Bacteria - 10471; Metazoa - 578; Fungi - 458; Plants - 569; Viruses - 1; Other Eukaryotes - 2671 (source: NCBI BLink). & (gnl|cdd|39380 : 351.0) no description available & (gnl|cdd|81168 : 101.0) no description available & (reliability: 878.0) & (original description: Putative eh1, Description = Epoxide hydrolase 1, PFAM = PF00561)' T '26.1' 'misc.misc2' 'niben101scf02014_9334-14664' '(at4g21580 : 485.0) oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity, zinc ion binding; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Quinone oxidoreductase putative, PIG3 (InterPro:IPR014189), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding alcohol dehydrogenase family protein (TAIR:AT5G61510.1); Has 44345 Blast hits to 44175 proteins in 2827 species: Archae - 637; Bacteria - 28883; Metazoa - 1910; Fungi - 3863; Plants - 1554; Viruses - 0; Other Eukaryotes - 7498 (source: NCBI BLink). & (gnl|cdd|30949 : 293.0) no description available & (gnl|cdd|36412 : 244.0) no description available & (q8h0m1|qorh_spiol : 86.7) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) & (reliability: 970.0) & (original description: Putative qor, Description = Putative quinone oxidoreductase, PFAM = PF00107;PF08240)' T '26.1' 'misc.misc2' 'niben101scf02080_236285-247215' '(at1g13560 : 650.0) Encodes aminoalcoholphosphotransferase AAPT1.; aminoalcoholphosphotransferase 1 (AAPT1); FUNCTIONS IN: phosphatidyltransferase activity, phosphotransferase activity, for other substituted phosphate groups; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: aminoalcoholphosphotransferase (TAIR:AT3G25585.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38088 : 371.0) no description available & (gnl|cdd|34655 : 196.0) no description available & (reliability: 1300.0) & (original description: Putative AAPT1, Description = Choline/ethanolaminephosphotransferase 1, PFAM = PF01066)' T '26.1' 'misc.misc2' 'niben101scf02340_343079-348566' '(gnl|cdd|39380 : 202.0) no description available & (at3g51000 : 196.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 19118 Blast hits to 19078 proteins in 1849 species: Archae - 110; Bacteria - 13477; Metazoa - 828; Fungi - 558; Plants - 614; Viruses - 8; Other Eukaryotes - 3523 (source: NCBI BLink). & (gnl|cdd|30941 : 101.0) no description available & (reliability: 392.0) & (original description: Putative eh3, Description = Epoxide hydrolase 3, PFAM = PF00561)' T '26.1' 'misc.misc2' 'niben101scf02485_12999-17589' '(at3g23600 : 264.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38253 : 197.0) no description available & (q9zt66|e134_maize : 139.0) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) - Zea mays (Maize) & (gnl|cdd|30761 : 97.0) no description available & (reliability: 528.0) & (original description: Putative GLU, Description = Endo-1,3-1,4-beta-D-glucanase-like protein, PFAM = PF01738)' T '26.1' 'misc.misc2' 'niben101scf03114_455205-462222' '(at4g25720 : 340.0) This locus encodes a protein with similarity to gamma-glutamylcyclotransferase that may be involved in catalyzing the formation of pyroglutate residue on proteins that have been post-translationally processed to reveal a glutamine at their N-terminus. Enzymatic assays to test the function of this protein were performed using a truncated form of the protein lacking a signal peptide that is most similar to the AT4G25720.1 protein model.; glutaminyl cyclase (QC); FUNCTIONS IN: glutaminyl-peptide cyclotransferase activity, catalytic activity; INVOLVED IN: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine cyclotransferase (InterPro:IPR007788), Nitrous oxide reductase, N-terminal (InterPro:IPR011045); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33616 : 223.0) no description available & (reliability: 680.0) & (original description: Putative qct, Description = Glutaminyl-peptide cyclotransferase, PFAM = PF05096)' T '26.1' 'misc.misc2' 'niben101scf03121_405670-431276' '(at1g72190 : 445.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: homoserine biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT4G34200.1); Has 28327 Blast hits to 28320 proteins in 2696 species: Archae - 466; Bacteria - 17634; Metazoa - 719; Fungi - 1167; Plants - 499; Viruses - 5; Other Eukaryotes - 7837 (source: NCBI BLink). & (gnl|cdd|35292 : 239.0) no description available & (gnl|cdd|84741 : 214.0) no description available & (q9sxp2|fdh1_orysa : 95.9) Formate dehydrogenase 1, mitochondrial precursor (EC 1.2.1.2) (NAD-dependent formate dehydrogenase 1) (FDH 1) - Oryza sativa (Rice) & (reliability: 890.0) & (original description: Putative 20, Description = Erythronate-4-phosphate+dehydrogenase+domain+containing+protein, PFAM = PF02826;PF00389)' T '26.1' 'misc.misc2' 'niben101scf03550_185882-191235' '(at1g73740 : 248.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, biosynthetic process, carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), Glycosyl transferase, family 28, C-terminal (InterPro:IPR007235); Has 7866 Blast hits to 7866 proteins in 2456 species: Archae - 0; Bacteria - 5567; Metazoa - 4; Fungi - 2; Plants - 34; Viruses - 0; Other Eukaryotes - 2259 (source: NCBI BLink). & (gnl|cdd|80731 : 161.0) no description available & (reliability: 496.0) & (original description: Putative murG, Description = UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase, PFAM = PF04101;PF03033)' T '26.1' 'misc.misc2' 'niben101scf03645_555186-559100' '(at1g15390 : 327.0) encodes a peptide deformylase-like protein. Removes N-formyl groups, a prerequisite for the action of methionine aminopeptidase during protein synthesis. Targeted to mitochondria. Requires Zn for catalysis.; peptide deformylase 1A (PDF1A); FUNCTIONS IN: peptide deformylase activity; INVOLVED IN: translation, co-translational protein modification; LOCATED IN: mitochondrion, chloroplast, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Formylmethionine deformylase (InterPro:IPR000181); BEST Arabidopsis thaliana protein match is: peptide deformylase 1B (TAIR:AT5G14660.2); Has 10999 Blast hits to 10999 proteins in 2667 species: Archae - 4; Bacteria - 8033; Metazoa - 124; Fungi - 0; Plants - 109; Viruses - 2; Other Eukaryotes - 2727 (source: NCBI BLink). & (gnl|cdd|38347 : 271.0) no description available & (gnl|cdd|80550 : 172.0) no description available & (reliability: 654.0) & (original description: Putative PDF1A, Description = Peptide deformylase 1A, chloroplastic, PFAM = PF01327)' T '26.1' 'misc.misc2' 'niben101scf03706_152501-160134' '(at4g02340 : 430.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 22331 Blast hits to 22276 proteins in 1970 species: Archae - 173; Bacteria - 16575; Metazoa - 610; Fungi - 564; Plants - 630; Viruses - 11; Other Eukaryotes - 3768 (source: NCBI BLink). & (gnl|cdd|39380 : 327.0) no description available & (gnl|cdd|81168 : 104.0) no description available & (reliability: 860.0) & (original description: Putative eh2, Description = Epoxide hydrolase 2, PFAM = PF00561)' T '26.1' 'misc.misc2' 'niben101scf03786_361756-374099' '(at2g32520 : 379.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, transferase activity, transferring acyl groups other than amino-acyl groups; INVOLVED IN: response to zinc ion; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase, active site (InterPro:IPR020610), Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G35420.2); Has 3505 Blast hits to 3505 proteins in 948 species: Archae - 38; Bacteria - 2818; Metazoa - 67; Fungi - 17; Plants - 98; Viruses - 0; Other Eukaryotes - 467 (source: NCBI BLink). & (gnl|cdd|38253 : 182.0) no description available & (gnl|cdd|85638 : 165.0) no description available & (reliability: 758.0) & (original description: Putative yghX, Description = Carboxymethylenebutenolidase, PFAM = PF01738)' T '26.1' 'misc.misc2' 'niben101scf04776_229530-234700' '(at3g23600 : 328.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38253 : 237.0) no description available & (q9zt66|e134_maize : 165.0) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) - Zea mays (Maize) & (gnl|cdd|30761 : 105.0) no description available & (reliability: 656.0) & (original description: Putative GLU, Description = Endo-1,31,4-beta-D-glucanase, PFAM = PF01738)' T '26.1' 'misc.misc2' 'niben101scf04776_268701-276736' '(at3g23600 : 222.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38253 : 185.0) no description available & (q9zt66|e134_maize : 114.0) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) - Zea mays (Maize) & (reliability: 444.0) & (original description: Putative GLU, Description = Endo-1,31,4-beta-D-glucanase, PFAM = PF01738)' T '26.1' 'misc.misc2' 'niben101scf05018_39842-50249' '(at4g19185 : 429.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G45370.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 802.0) & (original description: Putative At4g19185, Description = WAT1-related protein At4g19185, PFAM = PF00892;PF00892)' T '26.1' 'misc.misc2' 'niben101scf06556_719134-723214' '(at4g02340 : 403.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 22331 Blast hits to 22276 proteins in 1970 species: Archae - 173; Bacteria - 16575; Metazoa - 610; Fungi - 564; Plants - 630; Viruses - 11; Other Eukaryotes - 3768 (source: NCBI BLink). & (gnl|cdd|39380 : 318.0) no description available & (gnl|cdd|30941 : 100.0) no description available & (reliability: 806.0) & (original description: Putative eh1, Description = Epoxide hydrolase 1, PFAM = PF00561)' T '26.1' 'misc.misc2' 'niben101scf06556_727471-732956' '(at4g15960 : 379.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G15955.3); Has 13367 Blast hits to 13327 proteins in 1535 species: Archae - 74; Bacteria - 9325; Metazoa - 500; Fungi - 482; Plants - 526; Viruses - 1; Other Eukaryotes - 2459 (source: NCBI BLink). & (gnl|cdd|39380 : 320.0) no description available & (gnl|cdd|30941 : 104.0) no description available & (reliability: 758.0) & (original description: Putative eh1, Description = Epoxide hydrolase 1, PFAM = PF12697)' T '26.1' 'misc.misc2' 'niben101scf06684_70918-89813' '(at4g25720 : 330.0) This locus encodes a protein with similarity to gamma-glutamylcyclotransferase that may be involved in catalyzing the formation of pyroglutate residue on proteins that have been post-translationally processed to reveal a glutamine at their N-terminus. Enzymatic assays to test the function of this protein were performed using a truncated form of the protein lacking a signal peptide that is most similar to the AT4G25720.1 protein model.; glutaminyl cyclase (QC); FUNCTIONS IN: glutaminyl-peptide cyclotransferase activity, catalytic activity; INVOLVED IN: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine cyclotransferase (InterPro:IPR007788), Nitrous oxide reductase, N-terminal (InterPro:IPR011045); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33616 : 205.0) no description available & (reliability: 660.0) & (original description: Putative qct, Description = Glutaminyl-peptide cyclotransferase, PFAM = PF05096)' T '26.1' 'misc.misc2' 'niben101scf08531_389100-393730' '(at1g35420 : 330.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23600.1). & (gnl|cdd|38253 : 189.0) no description available & (gnl|cdd|85638 : 105.0) no description available & (reliability: 660.0) & (original description: Putative BnaAnng02030D, Description = BnaAnng02030D protein, PFAM = PF01738)' T '26.1' 'misc.misc2' 'niben101scf08566_41131-45896' '(at5g64250 : 465.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: oxidoreductase activity, catalytic activity, nitronate monooxygenase activity; INVOLVED IN: response to cadmium ion, response to symbiotic fungus, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), 2-nitropropane dioxygenase, NPD (InterPro:IPR004136); Has 10497 Blast hits to 10450 proteins in 2031 species: Archae - 24; Bacteria - 7204; Metazoa - 23; Fungi - 537; Plants - 70; Viruses - 0; Other Eukaryotes - 2639 (source: NCBI BLink). & (gnl|cdd|73392 : 206.0) no description available & (reliability: 930.0) & (original description: Putative pco099340a, Description = Oxidoreductase, PFAM = PF03060;PF03060)' T '26.1' 'misc.misc2' 'niben101scf10132_204599-209506' '(at5g14660 : 319.0) Encodes a peptide deformylase PDF1B. The crystal structure has been determined at a resolution of 0.24 nm (Biochem J, 2008, vol 413:417-427).; peptide deformylase 1B (PDF1B); FUNCTIONS IN: peptide deformylase activity; INVOLVED IN: translation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Formylmethionine deformylase (InterPro:IPR000181); BEST Arabidopsis thaliana protein match is: peptide deformylase 1A (TAIR:AT1G15390.1); Has 11057 Blast hits to 11054 proteins in 2650 species: Archae - 4; Bacteria - 7863; Metazoa - 125; Fungi - 0; Plants - 121; Viruses - 2; Other Eukaryotes - 2942 (source: NCBI BLink). & (gnl|cdd|38347 : 222.0) no description available & (gnl|cdd|29602 : 181.0) no description available & (reliability: 638.0) & (original description: Putative PDF1B, Description = Peptide deformylase 1B, chloroplastic, PFAM = PF01327)' T '26.1' 'misc.misc2' 'niben101scf10352_15384-21373' '(gnl|cdd|39380 : 215.0) no description available & (at4g02340 : 198.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 22331 Blast hits to 22276 proteins in 1970 species: Archae - 173; Bacteria - 16575; Metazoa - 610; Fungi - 564; Plants - 630; Viruses - 11; Other Eukaryotes - 3768 (source: NCBI BLink). & (gnl|cdd|30941 : 104.0) no description available & (reliability: 396.0) & (original description: Putative eh3, Description = Epoxide hydrolase-like protein, PFAM = PF00561)' T '26.1' 'misc.misc2' 'niben101scf10737_57371-62112' '(at4g02340 : 442.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 22331 Blast hits to 22276 proteins in 1970 species: Archae - 173; Bacteria - 16575; Metazoa - 610; Fungi - 564; Plants - 630; Viruses - 11; Other Eukaryotes - 3768 (source: NCBI BLink). & (gnl|cdd|39380 : 351.0) no description available & (gnl|cdd|81168 : 109.0) no description available & (reliability: 884.0) & (original description: Putative seh1, Description = Soluble epoxide hydrolase, PFAM = PF00561)' T '26.1' 'misc.misc2' 'niben101scf11791_1-6619' '(at4g02340 : 496.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 22331 Blast hits to 22276 proteins in 1970 species: Archae - 173; Bacteria - 16575; Metazoa - 610; Fungi - 564; Plants - 630; Viruses - 11; Other Eukaryotes - 3768 (source: NCBI BLink). & (gnl|cdd|39380 : 361.0) no description available & (gnl|cdd|30941 : 115.0) no description available & (reliability: 992.0) & (original description: Putative eh2, Description = Epoxide hydrolase 2, PFAM = PF00561)' T '26.1' 'misc.misc2' 'niben101scf13186_473576-478412' '(at5g14660 : 320.0) Encodes a peptide deformylase PDF1B. The crystal structure has been determined at a resolution of 0.24 nm (Biochem J, 2008, vol 413:417-427).; peptide deformylase 1B (PDF1B); FUNCTIONS IN: peptide deformylase activity; INVOLVED IN: translation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Formylmethionine deformylase (InterPro:IPR000181); BEST Arabidopsis thaliana protein match is: peptide deformylase 1A (TAIR:AT1G15390.1); Has 11057 Blast hits to 11054 proteins in 2650 species: Archae - 4; Bacteria - 7863; Metazoa - 125; Fungi - 0; Plants - 121; Viruses - 2; Other Eukaryotes - 2942 (source: NCBI BLink). & (gnl|cdd|38347 : 219.0) no description available & (gnl|cdd|29602 : 180.0) no description available & (reliability: 640.0) & (original description: Putative PDF1B, Description = Peptide deformylase 1B, chloroplastic, PFAM = PF01327)' T '26.1' 'misc.misc2' 'niben101scf15594_34631-38777' '(at3g51000 : 210.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 19118 Blast hits to 19078 proteins in 1849 species: Archae - 110; Bacteria - 13477; Metazoa - 828; Fungi - 558; Plants - 614; Viruses - 8; Other Eukaryotes - 3523 (source: NCBI BLink). & (gnl|cdd|39380 : 205.0) no description available & (gnl|cdd|30941 : 102.0) no description available & (reliability: 420.0) & (original description: Putative eh3, Description = Epoxide hydrolase 3, PFAM = PF00561)' T '26.1' 'misc.misc2' 'niben101scf17834_70097-78862' '(at5g58240 : 259.0) Encodes a Fhit protein. Has nucleoside phosphoramidase and adenylylsulfatase activities.; FRAGILE HISTIDINE TRIAD (FHIT); CONTAINS InterPro DOMAIN/s: Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808), Histidine triad (HIT) protein (InterPro:IPR001310), Histidine triad motif (InterPro:IPR011151); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38589 : 210.0) no description available & (gnl|cdd|29588 : 144.0) no description available & (reliability: 518.0) & (original description: Putative FHIT, Description = Bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT, PFAM = PF01230)' T '26.1' 'misc.misc2' 'niben101scf18080_9752-16753' '(at3g56460 : 504.0) GroES-like zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Quinone oxidoreductase/zeta-crystallin, conserved site (InterPro:IPR002364), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT4G21580.1); Has 42737 Blast hits to 42567 proteins in 2748 species: Archae - 582; Bacteria - 27121; Metazoa - 1964; Fungi - 3760; Plants - 1452; Viruses - 3; Other Eukaryotes - 7855 (source: NCBI BLink). & (gnl|cdd|30949 : 217.0) no description available & (gnl|cdd|36412 : 192.0) no description available & (reliability: 1008.0) & (original description: Putative ppsC, Description = Beta-ketoacyl-acyl-carrier-protein synthase I, PFAM = PF00107;PF08240)' T '26.1' 'misc.misc2' 'niben101scf18430_155599-167132' '(at4g02340 : 374.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 22331 Blast hits to 22276 proteins in 1970 species: Archae - 173; Bacteria - 16575; Metazoa - 610; Fungi - 564; Plants - 630; Viruses - 11; Other Eukaryotes - 3768 (source: NCBI BLink). & (gnl|cdd|39380 : 309.0) no description available & (gnl|cdd|30941 : 89.4) no description available & (reliability: 748.0) & (original description: Putative seh, Description = Putative epoxide hydrolase, PFAM = PF12697)' T '26.1' 'misc.misc2' 'niben101scf25633_86948-94175' '(at5g58240 : 252.0) Encodes a Fhit protein. Has nucleoside phosphoramidase and adenylylsulfatase activities.; FRAGILE HISTIDINE TRIAD (FHIT); CONTAINS InterPro DOMAIN/s: Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808), Histidine triad (HIT) protein (InterPro:IPR001310), Histidine triad motif (InterPro:IPR011151); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38589 : 200.0) no description available & (gnl|cdd|29588 : 137.0) no description available & (reliability: 504.0) & (original description: Putative aph1, Description = Bis(5'-adenosyl)-triphosphatase, PFAM = PF01230)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold1980_80282-87950' '(at4g38040 : 92.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G11610.1); Has 1409 Blast hits to 1398 proteins in 111 species: Archae - 0; Bacteria - 12; Metazoa - 341; Fungi - 4; Plants - 961; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative EXO, Description = Exostosin family protein, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold4370_22524-52280' '(at4g27480 : 598.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT3G15350.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36018 : 306.0) no description available & (gnl|cdd|66199 : 252.0) no description available & (reliability: 1196.0) & (original description: Putative GLCAT14A, Description = Beta-glucuronosyltransferase GlcAT14A, PFAM = PF02485)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold4893_50228-56491' '(at1g18580 : 813.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 11 (GAUT11); FUNCTIONS IN: polygalacturonate 4-alpha-galacturonosyltransferase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 10 (TAIR:AT2G20810.1); Has 1461 Blast hits to 1453 proteins in 263 species: Archae - 0; Bacteria - 484; Metazoa - 143; Fungi - 0; Plants - 819; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|85496 : 184.0) no description available & (reliability: 1626.0) & (original description: Putative GAUT11, Description = Probable galacturonosyltransferase 11, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold7598_49131-52525' '(p56725|zox_phavu : 447.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36770 : 192.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7907 Blast hits to 7812 proteins in 435 species: Archae - 0; Bacteria - 273; Metazoa - 2293; Fungi - 33; Plants - 5130; Viruses - 108; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 141.0) no description available & (gnl|cdd|79510 : 88.5) no description available & (reliability: 384.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold8220_16462-23704' '(at5g38460 : 463.0) ALG6, ALG8 glycosyltransferase family; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; LOCATED IN: endoplasmic reticulum membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyltransferase, ALG6/ALG8 (InterPro:IPR004856); BEST Arabidopsis thaliana protein match is: ALG6, ALG8 glycosyltransferase family (TAIR:AT2G44660.1). & (gnl|cdd|37786 : 263.0) no description available & (gnl|cdd|79991 : 235.0) no description available & (reliability: 926.0) & (original description: Putative alg6, Description = Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase, PFAM = PF03155)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold9980_4907-10537' '(at5g60700 : 1126.0) glycosyltransferase family protein 2; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12260.1); Has 216 Blast hits to 215 proteins in 74 species: Archae - 0; Bacteria - 15; Metazoa - 2; Fungi - 65; Plants - 77; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (reliability: 2252.0) & (original description: Putative BnaA02g06160D, Description = BnaA02g06160D protein, PFAM = )' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold10523_35406-39192' '(at1g22360 : 323.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 205.0) no description available & (p56725|zox_phavu : 176.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 96.5) no description available & (reliability: 646.0) & (original description: Putative UGT4, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold12407_41272-44463' '(at3g62720 : 718.0) Encodes a protein with xylosyltransferase activity, which is specific for UDP-xylose as donor substrate and for oligosaccharides with a degree of polymerization >4. Although the enzyme utilizes either cellopentaose or cellohexaose, its activity is four-fold higher with cellohexaose as an acceptor compared to cellopentaose. The enzyme is able to add several xylosyl residues to the acceptor forming mono-, di- and trixylosylated polysaccharides.; xylosyltransferase 1 (XT1); FUNCTIONS IN: xyloglucan 6-xylosyltransferase activity, UDP-xylosyltransferase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: polysaccharide biosynthetic process, xyloglucan biosynthetic process, root hair elongation; LOCATED IN: mitochondrion, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: UDP-xylosyltransferase 2 (TAIR:AT4G02500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39945 : 376.0) no description available & (gnl|cdd|69175 : 235.0) no description available & (reliability: 1436.0) & (original description: Putative XXT1, Description = Xyloglucan 6-xylosyltransferase 1, PFAM = PF05637)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold13835_12642-16150' '(at5g62220 : 478.0) glycosyltransferase 18 (GT18); FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 691 Blast hits to 690 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 667; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (q8h038|katam_orysa : 310.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 262.0) no description available & (gnl|cdd|66673 : 213.0) no description available & (reliability: 956.0) & (original description: Putative GT18, Description = Xyloglucan galactosyltransferase KATAMARI-like protein, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold17462_20417-24273' '(at1g63450 : 591.0) root hair specific 8 (RHS8); FUNCTIONS IN: catalytic activity; LOCATED IN: membrane; EXPRESSED IN: root hair, root; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G41250.1); Has 717 Blast hits to 713 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 686; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (q8h038|katam_orysa : 353.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|66673 : 291.0) no description available & (gnl|cdd|36239 : 286.0) no description available & (reliability: 1182.0) & (original description: Putative GT20, Description = Probable xyloglucan galactosyltransferase GT20, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold21916_20521-26947' '(at3g24040 : 453.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 634 Blast hits to 633 proteins in 99 species: Archae - 0; Bacteria - 13; Metazoa - 278; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|36018 : 234.0) no description available & (gnl|cdd|66199 : 215.0) no description available & (reliability: 906.0) & (original description: Putative At3g24040, Description = Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein, PFAM = PF02485)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold25747_17201-20664' '(at5g62220 : 586.0) glycosyltransferase 18 (GT18); FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 691 Blast hits to 690 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 667; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (q8h038|katam_orysa : 301.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 280.0) no description available & (gnl|cdd|66673 : 210.0) no description available & (reliability: 1172.0) & (original description: Putative GT11, Description = Xyloglucan galactosyltransferase KATAMARI-like protein, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold29509_25265-36450' '(at2g38650 : 571.0) galacturonosyltransferase 7 (GAUT7); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 4 (TAIR:AT5G47780.1). & (gnl|cdd|85496 : 126.0) no description available & (reliability: 1142.0) & (original description: Putative GAUT7, Description = Probable galacturonosyltransferase 7, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold30499_12942-22257' '(at4g32120 : 482.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT2G25300.1); Has 596 Blast hits to 595 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 165; Fungi - 0; Plants - 427; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|37499 : 296.0) no description available & (gnl|cdd|85659 : 99.6) no description available & (reliability: 964.0) & (original description: Putative HPGT2, Description = Hydroxyproline O-galactosyltransferase HPGT2, PFAM = PF13334;PF01762)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold31315_20225-23710' '(at1g27440 : 735.0) GUT2; FUNCTIONS IN: glucuronoxylan glucuronosyltransferase activity, catalytic activity; INVOLVED IN: secondary cell wall biogenesis, glucuronoxylan biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G61840.1); Has 1460 Blast hits to 1436 proteins in 120 species: Archae - 0; Bacteria - 14; Metazoa - 310; Fungi - 4; Plants - 1003; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|36239 : 261.0) no description available & (gnl|cdd|66673 : 165.0) no description available & (reliability: 1470.0) & (original description: Putative IRX10, Description = Probable beta-1,4-xylosyltransferase IRX10, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold39230_382-10538' '(at4g19900 : 551.0) alpha 1,4-glycosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, Golgi stack; EXPRESSED IN: flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Alpha 1,4-glycosyltransferase conserved region (InterPro:IPR007652), Glycosyltransferase, DXD sugar-binding region (InterPro:IPR007577); BEST Arabidopsis thaliana protein match is: alpha 1,4-glycosyltransferase family protein (TAIR:AT2G38152.1); Has 54113 Blast hits to 14510 proteins in 385 species: Archae - 4; Bacteria - 200; Metazoa - 877; Fungi - 767; Plants - 50641; Viruses - 0; Other Eukaryotes - 1624 (source: NCBI BLink). & (gnl|cdd|37139 : 229.0) no description available & (gnl|cdd|68155 : 88.9) no description available & (reliability: 1102.0) & (original description: Putative GT32A1, Description = Alpha 1,4-glycosyltransferase conserved region, PFAM = PF04572;PF04488)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold39340_14393-17913' '(at3g21760 : 387.0) Encodes HYR1, a UDP glycosyltransferase (UGT). HYR1 glucosylates hypostatin, an inhibitor of cell expansion in vivo to form a bioactive glucoside.; HYPOSTATIN RESISTANCE 1 (HYR1); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71B6 (TAIR:AT3G21780.1); Has 7489 Blast hits to 7432 proteins in 389 species: Archae - 0; Bacteria - 261; Metazoa - 2177; Fungi - 28; Plants - 4962; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 193.0) no description available & (p56725|zox_phavu : 152.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 85.4) no description available & (reliability: 774.0) & (original description: Putative GT6, Description = UDP-glucose flavonoid 3-O-glucosyltransferase 6, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold57643_1350-5880' '(at3g21760 : 396.0) Encodes HYR1, a UDP glycosyltransferase (UGT). HYR1 glucosylates hypostatin, an inhibitor of cell expansion in vivo to form a bioactive glucoside.; HYPOSTATIN RESISTANCE 1 (HYR1); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71B6 (TAIR:AT3G21780.1); Has 7489 Blast hits to 7432 proteins in 389 species: Archae - 0; Bacteria - 261; Metazoa - 2177; Fungi - 28; Plants - 4962; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 183.0) no description available & (q43641|ufog_solme : 140.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|79510 : 90.4) no description available & (reliability: 792.0) & (original description: Putative UGT71E1, Description = UDP-glycosyltransferase 71E1, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold58477_9322-12360' '(at3g28340 : 478.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 10 (GATL10); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: glucosyl transferase family 8 (TAIR:AT1G70090.2); Has 2215 Blast hits to 2207 proteins in 459 species: Archae - 2; Bacteria - 1092; Metazoa - 267; Fungi - 4; Plants - 737; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|85496 : 186.0) no description available & (reliability: 912.0) & (original description: Putative GATL10, Description = Probable galacturonosyltransferase-like 10, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold61581_10014-11468' '(at4g38040 : 152.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G11610.1); Has 1409 Blast hits to 1398 proteins in 111 species: Archae - 0; Bacteria - 12; Metazoa - 341; Fungi - 4; Plants - 961; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|36239 : 114.0) no description available & (gnl|cdd|66673 : 88.2) no description available & (reliability: 304.0) & (original description: Putative EXO, Description = Exostosin family protein, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold61632_5590-11253' '(at3g15940 : 717.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G52420.1). & (gnl|cdd|36071 : 164.0) no description available & (gnl|cdd|30787 : 85.5) no description available & (reliability: 1434.0) & (original description: Putative 1g52420, Description = AT3g15940/MVC8_7, PFAM = PF16994;PF00534)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold66769_1-6793' '(at3g24040 : 293.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 634 Blast hits to 633 proteins in 99 species: Archae - 0; Bacteria - 13; Metazoa - 278; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|36018 : 135.0) no description available & (gnl|cdd|66199 : 113.0) no description available & (reliability: 586.0) & (original description: Putative GnT, Description = Xylosyltransferase 1, PFAM = PF02485)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold78434_2669-7480' '(at5g61840 : 732.0) GUT1; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT1G27440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36239 : 266.0) no description available & (gnl|cdd|66673 : 171.0) no description available & (reliability: 1464.0) & (original description: Putative IRX10L, Description = Probable beta-1,4-xylosyltransferase IRX10L, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold87126_2420-5796' '(at4g27570 : 441.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: N-terminal protein myristoylation, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G27560.1); Has 4908 Blast hits to 4874 proteins in 244 species: Archae - 0; Bacteria - 41; Metazoa - 215; Fungi - 17; Plants - 4624; Viruses - 3; Other Eukaryotes - 8 (source: NCBI BLink). & (q43716|ufog_pethy : 347.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 151.0) no description available & (reliability: 854.0) & (original description: Putative 3GGT, Description = Anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold92618_176-2815' '(at1g03520 : 272.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT4G03340.1); Has 942 Blast hits to 942 proteins in 115 species: Archae - 0; Bacteria - 40; Metazoa - 553; Fungi - 0; Plants - 314; Viruses - 14; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|36018 : 138.0) no description available & (gnl|cdd|66199 : 128.0) no description available & (reliability: 544.0) & (original description: Putative GnT, Description = Xylosyltransferase 1, PFAM = PF02485)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold99445_179-3720' '(at3g50740 : 394.0) UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism.; UDP-glucosyl transferase 72E1 (UGT72E1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G66690.1); Has 8063 Blast hits to 8012 proteins in 453 species: Archae - 0; Bacteria - 455; Metazoa - 2482; Fungi - 35; Plants - 4969; Viruses - 57; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 198.0) no description available & (p56725|zox_phavu : 165.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 81.5) no description available & (reliability: 744.0) & (original description: Putative GT5, Description = Anthocyanidin 3-O-glucosyltransferase 5, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold103014_420-3677' '(at2g36800 : 440.0) Encodes a DON-Glucosyltransferase. The UGT73C5 glucosylates both brassinolide and castasterone in the 23-O position. The enzyme is presumably involved in the homeostasis of those steroid hormones hence regulating BR activity. Transgenic plants overexpressing UGT73C5 show a typical BR-deficient phenotype.; don-glucosyltransferase 1 (DOGT1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73C6 (TAIR:AT2G36790.1); Has 7663 Blast hits to 7564 proteins in 401 species: Archae - 0; Bacteria - 196; Metazoa - 2172; Fungi - 32; Plants - 5134; Viruses - 64; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 215.0) no description available & (p56725|zox_phavu : 135.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 90.8) no description available & (reliability: 876.0) & (original description: Putative UGT73C3, Description = UDP-glycosyltransferase 73C3, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.3scaffold109876_1-2601' '(at4g22580 : 577.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT4G13990.1); Has 709 Blast hits to 706 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 4; Plants - 670; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|36239 : 228.0) no description available & (q8h038|katam_orysa : 223.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|66673 : 213.0) no description available & (reliability: 1154.0) & (original description: Putative GT19, Description = Probable xyloglucan galactosyltransferase GT19, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold121_97229-100296' '(p56725|zox_phavu : 218.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at3g46670 : 117.0) UDP-glucosyl transferase 76E11 (UGT76E11); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 76E12 (TAIR:AT3G46660.1); Has 7711 Blast hits to 7649 proteins in 441 species: Archae - 0; Bacteria - 362; Metazoa - 2148; Fungi - 33; Plants - 5036; Viruses - 65; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36406 : 84.2) no description available & (reliability: 234.0) & (original description: Putative ZOG2, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold238_418311-420323' '(at4g16710 : 135.0) glycosyltransferase family protein 28; FUNCTIONS IN: carbohydrate binding, transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, biosynthetic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28, C-terminal (InterPro:IPR007235); Has 643 Blast hits to 638 proteins in 315 species: Archae - 10; Bacteria - 244; Metazoa - 125; Fungi - 122; Plants - 50; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (gnl|cdd|38559 : 111.0) no description available & (reliability: 270.0) & (original description: Putative ALG13, Description = UDP-N-acetylglucosamine transferase subunit alg13, PFAM = PF04101)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold253_418977-421584' '(at2g31790 : 169.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: Uridine diphosphate glycosyltransferase 74E2 (TAIR:AT1G05680.1); Has 8757 Blast hits to 8682 proteins in 575 species: Archae - 0; Bacteria - 847; Metazoa - 2565; Fungi - 65; Plants - 5076; Viruses - 120; Other Eukaryotes - 84 (source: NCBI BLink). & (q41819|iaag_maize : 118.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 89.2) no description available & (reliability: 338.0) & (original description: Putative UGT3, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold273_549474-552378' '(p56725|zox_phavu : 120.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g36770 : 87.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, sepal, flower, pedicel, synergid; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72E1 (TAIR:AT3G50740.1); Has 8229 Blast hits to 8179 proteins in 484 species: Archae - 0; Bacteria - 520; Metazoa - 2565; Fungi - 32; Plants - 4963; Viruses - 88; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 84.6) no description available & (reliability: 174.0) & (original description: Putative GT2, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold343_505652-510697' '(at1g22360 : 352.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 217.0) no description available & (q41819|iaag_maize : 185.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 102.0) no description available & (reliability: 704.0) & (original description: Putative UGT709C2, Description = 7-deoxyloganetic acid glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold740_561201-569836' '(at2g15490 : 159.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (q8rxa5|czog2_maize : 132.0) Cis-zeatin O-glucosyltransferase 2 (EC 2.4.1.215) (cisZOG2) - Zea mays (Maize) & (gnl|cdd|36406 : 130.0) no description available & (gnl|cdd|79510 : 83.8) no description available & (reliability: 318.0) & (original description: Putative UGT95B1, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold951_205318-208752' '(at1g75420 : 387.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G19710.1); Has 7008 Blast hits to 7002 proteins in 1487 species: Archae - 264; Bacteria - 4740; Metazoa - 98; Fungi - 57; Plants - 126; Viruses - 0; Other Eukaryotes - 1723 (source: NCBI BLink). & (gnl|cdd|36071 : 214.0) no description available & (reliability: 750.0) & (original description: Putative GT4A2, Description = Lipopolysaccharide core biosynthesis mannosyltransferase lpsB, PFAM = PF00534)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold1151_83851-87359' '(at5g62220 : 477.0) glycosyltransferase 18 (GT18); FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 691 Blast hits to 690 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 667; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (q8h038|katam_orysa : 308.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 260.0) no description available & (gnl|cdd|66673 : 212.0) no description available & (reliability: 954.0) & (original description: Putative GT18, Description = Xyloglucan galactosyltransferase KATAMARI-like protein, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold1360_118420-124480' '(at1g22380 : 319.0) Encodes a putative UDP-glucosyl transferase. At1g22380 was initially identified as encoding the protein AAF87154, which has been classified as a bHLH protein (AtbHLH152). Subsequently it has been found that the AAF87154 protein appears to be encoded by the AT1G23970 genomic locus.; UDP-glucosyl transferase 85A3 (UGT85A3); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G22400.1); Has 7656 Blast hits to 7558 proteins in 363 species: Archae - 0; Bacteria - 87; Metazoa - 2193; Fungi - 26; Plants - 5186; Viruses - 99; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 202.0) no description available & (q41819|iaag_maize : 177.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 101.0) no description available & (reliability: 638.0) & (original description: Putative GT4, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold1421_163842-174514' '(at1g21480 : 435.0) Exostosin family protein; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: FRA8 homolog (TAIR:AT5G22940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36239 : 103.0) no description available & (reliability: 870.0) & (original description: Putative LOC100192822, Description = Glycosyltransferase, family GT47, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold2129_320350-326010' '(at2g18570 : 157.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G18560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 156.0) no description available & (q43716|ufog_pethy : 145.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (reliability: 304.0) & (original description: Putative NSGT1, Description = Truncated non-smoky glycosyltransferase 1, PFAM = PF08268;PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold2277_44958-49667' '(at5g17050 : 445.0) The At5g17050 encodes a anthocyanidin 3-O-glucosyltransferase which specifically glucosylates the 3-position of the flavonoid C-ring. Anthocyanidins such as cyanidin and pelargonidin as well as flavonols such as kaempferol and quercetin are accepted substrates.; UDP-glucosyl transferase 78D2 (UGT78D2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 78D3 (TAIR:AT5G17030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43641|ufog_solme : 340.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|36406 : 185.0) no description available & (gnl|cdd|79510 : 147.0) no description available & (reliability: 812.0) & (original description: Putative bz, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold2392_117686-122409' '(at3g02350 : 803.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 9 (GAUT9); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT3G25140.1); Has 1426 Blast hits to 1422 proteins in 244 species: Archae - 0; Bacteria - 444; Metazoa - 141; Fungi - 7; Plants - 818; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|85496 : 179.0) no description available & (reliability: 1606.0) & (original description: Putative GAUT9, Description = Probable galacturonosyltransferase 9, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold2568_170910-174478' '(at5g62220 : 460.0) glycosyltransferase 18 (GT18); FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 691 Blast hits to 690 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 667; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (q8h038|katam_orysa : 313.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 270.0) no description available & (gnl|cdd|66673 : 220.0) no description available & (reliability: 920.0) & (original description: Putative BnaA05g10990D, Description = BnaA05g10990D protein, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold3896_214289-220199' '(at5g62620 : 853.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, sugar binding, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G74800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37498 : 308.0) no description available & (gnl|cdd|85659 : 89.2) no description available & (reliability: 1706.0) & (original description: Putative GALT6, Description = Hydroxyproline O-galactosyltransferase GALT6, PFAM = PF01762;PF00337)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold4265_42769-46247' '(at5g12890 : 450.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 192.0) no description available & (p56725|zox_phavu : 139.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 900.0) & (original description: Putative UGT92A1, Description = UDP-glycosyltransferase 92A1, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold4650_1-5551' '(at4g38040 : 275.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G11610.1); Has 1409 Blast hits to 1398 proteins in 111 species: Archae - 0; Bacteria - 12; Metazoa - 341; Fungi - 4; Plants - 961; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|36239 : 195.0) no description available & (gnl|cdd|66673 : 159.0) no description available & (reliability: 550.0) & (original description: Putative EXO, Description = Exostosin family protein, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold7085_62302-70241' '(at5g04500 : 979.0) a member of the Glycosyltransferase Family 64 (according to CAZy Database); glycosyltransferase family protein 47; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: embryo, leaf whorl, sperm cell, flower; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: EXTL2, alpha-1,4-N-acetylhexosaminyltransferase (InterPro:IPR015338); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT3G55830.1); Has 971 Blast hits to 969 proteins in 180 species: Archae - 4; Bacteria - 178; Metazoa - 489; Fungi - 8; Plants - 111; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|36240 : 591.0) no description available & (gnl|cdd|72674 : 277.0) no description available & (reliability: 1958.0) & (original description: Putative At5g04500, Description = Glycosyltransferase family protein 64 protein C5, PFAM = PF09258)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold7750_12770-16609' '(at5g14860 : 414.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: central cell; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213), Tudor subgroup (InterPro:IPR018351); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G16890.2); Has 7679 Blast hits to 7613 proteins in 497 species: Archae - 0; Bacteria - 501; Metazoa - 1984; Fungi - 34; Plants - 4971; Viruses - 133; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|36406 : 216.0) no description available & (p56725|zox_phavu : 145.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 81.5) no description available & (reliability: 828.0) & (original description: Putative UGT90A1, Description = UDP-glycosyltransferase 90A1, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold8779_5270-13142' '(at1g06780 : 617.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 6 (GAUT6); FUNCTIONS IN: polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: los glycosyltransferase 5 (TAIR:AT2G30575.1). & (gnl|cdd|85496 : 166.0) no description available & (reliability: 1234.0) & (original description: Putative GAUT6, Description = Probable galacturonosyltransferase 6, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'nbv0.5scaffold8921_14169-29508' '(at3g24040 : 449.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 634 Blast hits to 633 proteins in 99 species: Archae - 0; Bacteria - 13; Metazoa - 278; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|36018 : 236.0) no description available & (gnl|cdd|66199 : 213.0) no description available & (reliability: 898.0) & (original description: Putative At3g24040, Description = Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein, PFAM = PF02485)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00000202ctg003_1198-4661' '(at5g62220 : 582.0) glycosyltransferase 18 (GT18); FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 691 Blast hits to 690 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 667; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (q8h038|katam_orysa : 300.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 279.0) no description available & (gnl|cdd|66673 : 209.0) no description available & (reliability: 1164.0) & (original description: Putative XLT2, Description = Xyloglucan galactosyltransferase XLT2, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00003896ctg041_366-2607' '(at1g22380 : 233.0) Encodes a putative UDP-glucosyl transferase. At1g22380 was initially identified as encoding the protein AAF87154, which has been classified as a bHLH protein (AtbHLH152). Subsequently it has been found that the AAF87154 protein appears to be encoded by the AT1G23970 genomic locus.; UDP-glucosyl transferase 85A3 (UGT85A3); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G22400.1); Has 7656 Blast hits to 7558 proteins in 363 species: Archae - 0; Bacteria - 87; Metazoa - 2193; Fungi - 26; Plants - 5186; Viruses - 99; Other Eukaryotes - 65 (source: NCBI BLink). & (q43641|ufog_solme : 154.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|36406 : 151.0) no description available & (gnl|cdd|79510 : 94.6) no description available & (reliability: 466.0) & (original description: Putative GT4, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00004909ctg000_379-3018' '(at1g03520 : 272.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT4G03340.1); Has 942 Blast hits to 942 proteins in 115 species: Archae - 0; Bacteria - 40; Metazoa - 553; Fungi - 0; Plants - 314; Viruses - 14; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|36018 : 135.0) no description available & (gnl|cdd|66199 : 128.0) no description available & (reliability: 544.0) & (original description: Putative GnT, Description = Xylosyltransferase 1, PFAM = PF02485)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00005131ctg022_13543-18747' '(at5g60700 : 1125.0) glycosyltransferase family protein 2; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12260.1); Has 216 Blast hits to 215 proteins in 74 species: Archae - 0; Bacteria - 15; Metazoa - 2; Fungi - 65; Plants - 77; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (reliability: 2250.0) & (original description: Putative BnaA02g06160D, Description = BnaA02g06160D protein, PFAM = )' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00005646ctg012_129-8056' '(at1g06780 : 627.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 6 (GAUT6); FUNCTIONS IN: polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: los glycosyltransferase 5 (TAIR:AT2G30575.1). & (gnl|cdd|85496 : 167.0) no description available & (reliability: 1254.0) & (original description: Putative GAUT6, Description = Probable galacturonosyltransferase 6, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00006077ctg025_3245-7181' '(at1g05680 : 380.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 290.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 195.0) no description available & (gnl|cdd|79510 : 111.0) no description available & (reliability: 746.0) & (original description: Putative UGT74E2, Description = UDP-glycosyltransferase 74E2, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00007351ctg001_1127-3780' '(at3g50740 : 262.0) UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism.; UDP-glucosyl transferase 72E1 (UGT72E1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G66690.1); Has 8063 Blast hits to 8012 proteins in 453 species: Archae - 0; Bacteria - 455; Metazoa - 2482; Fungi - 35; Plants - 4969; Viruses - 57; Other Eukaryotes - 65 (source: NCBI BLink). & (p56725|zox_phavu : 180.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|36406 : 132.0) no description available & (gnl|cdd|79510 : 84.6) no description available & (reliability: 518.0) & (original description: Putative ugt1, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00007578ctg015_10313-13671' '(at5g49690 : 206.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 186.0) no description available & (q43716|ufog_pethy : 182.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|79510 : 93.9) no description available & (reliability: 392.0) & (original description: Putative UGT94E5, Description = Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00009437ctg008_1-4138' '(at3g15350 : 622.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT1G53100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36018 : 340.0) no description available & (gnl|cdd|66199 : 269.0) no description available & (reliability: 1244.0) & (original description: Putative BnaC05g38280D, Description = BnaC05g38280D protein, PFAM = PF02485)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00013930ctg006_7578-16727' '(at1g31070 : 826.0) Encodes a protein that functions as an N-acetylglucosamine-1-phosphate uridylyltransferase that catalyzes the formation of UDP-N-acetylglucosamine (UDP-GlcNAc). This is an essential precursor for glycolipid and glycoprotein synthesis and is also used for regulatory protein modification in signaling pathways. The enzyme can also catalyze the reverse reaction using both UDP-GlcNAc and the less common UDP-N-acetylgalactosamine as substrates.; N-acetylglucosamine-1-phosphate uridylyltransferase 1 (GlcNAc1pUT1); FUNCTIONS IN: UDP-N-acetylglucosamine diphosphorylase activity, UDP-N-acetylgalactosamine diphosphorylase activity; INVOLVED IN: UDP-N-acetylglucosamine metabolic process, UDP-N-acetylgalactosamine metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: N-acetylglucosamine-1-phosphate uridylyltransferase 2 (TAIR:AT2G35020.1); Has 1399 Blast hits to 1393 proteins in 421 species: Archae - 0; Bacteria - 358; Metazoa - 399; Fungi - 277; Plants - 154; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37599 : 581.0) no description available & (gnl|cdd|34006 : 258.0) no description available & (reliability: 1634.0) & (original description: Putative uap1, Description = UDP-N-acetylglucosamine pyrophosphorylase, PFAM = PF01704)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00016048ctg025_1-1459' '(at3g24040 : 162.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 634 Blast hits to 633 proteins in 99 species: Archae - 0; Bacteria - 13; Metazoa - 278; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|66199 : 105.0) no description available & (gnl|cdd|36018 : 103.0) no description available & (reliability: 324.0) & (original description: Putative GT14A1, Description = Xylosyltransferase 1, PFAM = PF02485)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00016319ctg004_2399-5950' '(p56725|zox_phavu : 486.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36770 : 182.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7907 Blast hits to 7812 proteins in 435 species: Archae - 0; Bacteria - 273; Metazoa - 2293; Fungi - 33; Plants - 5130; Viruses - 108; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 156.0) no description available & (gnl|cdd|79510 : 95.4) no description available & (reliability: 364.0) & (original description: Putative GT2, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00016850ctg021_3468-8229' '(at3g02350 : 802.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 9 (GAUT9); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT3G25140.1); Has 1426 Blast hits to 1422 proteins in 244 species: Archae - 0; Bacteria - 444; Metazoa - 141; Fungi - 7; Plants - 818; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|85496 : 184.0) no description available & (reliability: 1604.0) & (original description: Putative GAUT9, Description = Probable galacturonosyltransferase 9, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00017324ctg011_1129-3995' '(at5g65550 : 187.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 179.0) no description available & (q43716|ufog_pethy : 171.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|79510 : 90.8) no description available & (reliability: 348.0) & (original description: Putative UGT94E2, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00017657ctg007_6289-9897' '(at4g15550 : 467.0) UDP-glucose:indole-3-acetate beta-D-glucosyltransferase; indole-3-acetate beta-D-glucosyltransferase (IAGLU); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 75B1 (TAIR:AT1G05560.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q41819|iaag_maize : 264.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 220.0) no description available & (gnl|cdd|79510 : 94.6) no description available & (reliability: 934.0) & (original description: Putative gt2, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00017758ctg000_1-9836' '(at1g21480 : 583.0) Exostosin family protein; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: FRA8 homolog (TAIR:AT5G22940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36239 : 159.0) no description available & (gnl|cdd|66673 : 134.0) no description available & (reliability: 1166.0) & (original description: Putative AT1G21480, Description = Predicted protein, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00018141ctg019_1-2055' '(at1g21480 : 142.0) Exostosin family protein; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: FRA8 homolog (TAIR:AT5G22940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative AT1G21480, Description = Exostosin family protein isoform 1, PFAM = )' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00018570ctg025_20653-25950' '(at1g18580 : 817.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 11 (GAUT11); FUNCTIONS IN: polygalacturonate 4-alpha-galacturonosyltransferase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 10 (TAIR:AT2G20810.1); Has 1461 Blast hits to 1453 proteins in 263 species: Archae - 0; Bacteria - 484; Metazoa - 143; Fungi - 0; Plants - 819; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|85496 : 184.0) no description available & (reliability: 1634.0) & (original description: Putative GAUT11, Description = Probable galacturonosyltransferase 11, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00019145ctg009_1-3570' '(at3g24040 : 284.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 634 Blast hits to 633 proteins in 99 species: Archae - 0; Bacteria - 13; Metazoa - 278; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|36018 : 126.0) no description available & (gnl|cdd|66199 : 110.0) no description available & (reliability: 568.0) & (original description: Putative GnT, Description = Xylosyltransferase 1, PFAM = PF02485)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00019806ctg002_15710-18414' '(at1g05680 : 251.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 190.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 134.0) no description available & (gnl|cdd|79510 : 102.0) no description available & (reliability: 478.0) & (original description: Putative GT, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00019841ctg000_27175-30260' '(at3g62660 : 579.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 7 (GATL7); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 5 (TAIR:AT1G02720.2); Has 1817 Blast hits to 1811 proteins in 371 species: Archae - 0; Bacteria - 732; Metazoa - 289; Fungi - 4; Plants - 732; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|85496 : 201.0) no description available & (reliability: 1158.0) & (original description: Putative GATL7, Description = Probable galacturonosyltransferase-like 7, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00022311ctg010_1325-4809' '(at5g12890 : 314.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 171.0) no description available & (p56725|zox_phavu : 160.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 81.5) no description available & (reliability: 628.0) & (original description: Putative UDP, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00022926ctg008_12198-17190' '(at4g01070 : 401.0) the glycosyltransferase (UGT72B1) is involved in metabolizing xenobiotica (chloroaniline and chlorophenole). Comparison between wild type and knock-out mutant demonstrates the central role of this gene for metabolizing chloroaniline but significantly less for chlorophenole. The glucosyltransferase preferred UDP-xylose over UDP-glucose indicating its (additional) functioning as a xylosyltransferase in planta; GT72B1; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1). & (gnl|cdd|36406 : 171.0) no description available & (q8rxa5|czog2_maize : 168.0) Cis-zeatin O-glucosyltransferase 2 (EC 2.4.1.215) (cisZOG2) - Zea mays (Maize) & (gnl|cdd|79510 : 80.8) no description available & (reliability: 770.0) & (original description: Putative AS, Description = Hydroquinone glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00024259ctg008_59215-65371' '(at4g38040 : 92.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G11610.1); Has 1409 Blast hits to 1398 proteins in 111 species: Archae - 0; Bacteria - 12; Metazoa - 341; Fungi - 4; Plants - 961; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative EXO, Description = Exostosin family protein, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00024259ctg010_8411-12193' '(at4g38040 : 284.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G11610.1); Has 1409 Blast hits to 1398 proteins in 111 species: Archae - 0; Bacteria - 12; Metazoa - 341; Fungi - 4; Plants - 961; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|36239 : 206.0) no description available & (gnl|cdd|66673 : 164.0) no description available & (reliability: 568.0) & (original description: Putative EXO, Description = Exostosin family protein, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00026395ctg000_9445-19094' '(at5g62220 : 473.0) glycosyltransferase 18 (GT18); FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 691 Blast hits to 690 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 667; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (q8h038|katam_orysa : 308.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 258.0) no description available & (gnl|cdd|66673 : 207.0) no description available & (reliability: 946.0) & (original description: Putative GT18, Description = Xyloglucan galactosyltransferase KATAMARI-like protein, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00028734ctg002_13704-19697' '(at2g44660 : 634.0) ALG6, ALG8 glycosyltransferase family; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, endoplasmic reticulum membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyltransferase, ALG6/ALG8 (InterPro:IPR004856); BEST Arabidopsis thaliana protein match is: ALG6, ALG8 glycosyltransferase family (TAIR:AT5G38460.2); Has 667 Blast hits to 660 proteins in 181 species: Archae - 0; Bacteria - 16; Metazoa - 273; Fungi - 247; Plants - 67; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|37787 : 479.0) no description available & (gnl|cdd|79991 : 338.0) no description available & (reliability: 1268.0) & (original description: Putative alg8, Description = Dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase, PFAM = PF03155)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00030682ctg003_14566-19171' '(at1g33430 : 536.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: pollen exine formation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G32930.1). & (gnl|cdd|37499 : 386.0) no description available & (gnl|cdd|85659 : 150.0) no description available & (reliability: 968.0) & (original description: Putative B3GALT8, Description = Probable beta-1,3-galactosyltransferase 8, PFAM = PF13334;PF01762)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00032091ctg008_2859-7138' '(at4g27480 : 568.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT3G15350.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36018 : 317.0) no description available & (gnl|cdd|66199 : 250.0) no description available & (reliability: 1136.0) & (original description: Putative GnT, Description = Xylosyltransferase 1, PFAM = PF02485)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00032671ctg003_1-2590' '(at1g22360 : 211.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q93xp7|czog1_maize : 146.0) Cis-zeatin O-glucosyltransferase 1 (EC 2.4.1.215) (cisZOG1) - Zea mays (Maize) & (gnl|cdd|36406 : 143.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 422.0) & (original description: Putative BX8, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00033349ctg002_1281-4623' '(at4g01210 : 385.0) glycosyl transferase family 1 protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G04480.1); Has 816 Blast hits to 811 proteins in 174 species: Archae - 9; Bacteria - 331; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 410 (source: NCBI BLink). & (reliability: 770.0) & (original description: Putative At4g01210, Description = Putative uncharacterized protein At4g01210, PFAM = )' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00034164ctg001_5022-14618' '(at4g19900 : 574.0) alpha 1,4-glycosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, Golgi stack; EXPRESSED IN: flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Alpha 1,4-glycosyltransferase conserved region (InterPro:IPR007652), Glycosyltransferase, DXD sugar-binding region (InterPro:IPR007577); BEST Arabidopsis thaliana protein match is: alpha 1,4-glycosyltransferase family protein (TAIR:AT2G38152.1); Has 54113 Blast hits to 14510 proteins in 385 species: Archae - 4; Bacteria - 200; Metazoa - 877; Fungi - 767; Plants - 50641; Viruses - 0; Other Eukaryotes - 1624 (source: NCBI BLink). & (gnl|cdd|37139 : 235.0) no description available & (gnl|cdd|68155 : 103.0) no description available & (reliability: 1148.0) & (original description: Putative GT32A1, Description = Alpha 1,4-glycosyltransferase conserved region, PFAM = PF04572;PF04488)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00034922ctg007_9718-17222' '(at3g01040 : 836.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 13 (GAUT13); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 14 (TAIR:AT5G15470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85496 : 181.0) no description available & (reliability: 1672.0) & (original description: Putative GAUT14, Description = Probable galacturonosyltransferase 14, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00038471ctg003_1961-8293' '(at2g39630 : 400.0) Encodes a putative dolichyl-phosphate β-glucosyltransferase.; Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, protein amino acid glycosylation; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G20575.1); Has 13322 Blast hits to 13314 proteins in 2299 species: Archae - 543; Bacteria - 9870; Metazoa - 265; Fungi - 258; Plants - 96; Viruses - 22; Other Eukaryotes - 2268 (source: NCBI BLink). & (gnl|cdd|38188 : 276.0) no description available & (gnl|cdd|84843 : 88.7) no description available & (reliability: 800.0) & (original description: Putative ALG5E, Description = Dolichyl-phosphate beta-glucosyltransferase ALG5E, PFAM = PF00535)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00041701ctg000_172-5511' '(at1g71070 : 541.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 951 Blast hits to 950 proteins in 117 species: Archae - 0; Bacteria - 44; Metazoa - 555; Fungi - 0; Plants - 318; Viruses - 14; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|36018 : 270.0) no description available & (gnl|cdd|66199 : 235.0) no description available & (reliability: 1082.0) & (original description: Putative GnT, Description = N-acetylglucosaminyltransferase, PFAM = PF02485)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00044087ctg000_1-2018' '(at1g22370 : 81.6) UDP-glucosyl transferase 85A5 (UGT85A5); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A2 (TAIR:AT1G22360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative UGT8, Description = Glycosyltransferase, PFAM = )' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00049613ctg000_1-4951' '(at1g13250 : 444.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 3 (GATL3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase-like 4 (TAIR:AT3G06260.1); Has 2168 Blast hits to 2160 proteins in 496 species: Archae - 2; Bacteria - 1004; Metazoa - 285; Fungi - 17; Plants - 765; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|85496 : 178.0) no description available & (reliability: 888.0) & (original description: Putative GATL3, Description = Probable galacturonosyltransferase-like 3, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben044scf00059667ctg000_1-7989' '(at1g75420 : 611.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G19710.1); Has 7008 Blast hits to 7002 proteins in 1487 species: Archae - 264; Bacteria - 4740; Metazoa - 98; Fungi - 57; Plants - 126; Viruses - 0; Other Eukaryotes - 1723 (source: NCBI BLink). & (gnl|cdd|36071 : 319.0) no description available & (gnl|cdd|84842 : 83.8) no description available & (reliability: 1182.0) & (original description: Putative GT4A2, Description = Glycosyltransferase, CAZy family GT4, PFAM = PF16994;PF00534)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00024_250572-255626' '(at5g62620 : 926.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, sugar binding, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G74800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37498 : 307.0) no description available & (gnl|cdd|84703 : 89.2) no description available & (reliability: 1852.0) & (original description: Putative BnaAnng17780D, Description = BnaAnng17780D protein, PFAM = PF01762;PF00337)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00063_595710-599503' '(at2g29040 : 546.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 4124 Blast hits to 3335 proteins in 318 species: Archae - 0; Bacteria - 277; Metazoa - 1010; Fungi - 350; Plants - 587; Viruses - 35; Other Eukaryotes - 1865 (source: NCBI BLink). & (q8h038|katam_orysa : 533.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 315.0) no description available & (gnl|cdd|66673 : 305.0) no description available & (reliability: 1092.0) & (original description: Putative GT17, Description = Probable xyloglucan galactosyltransferase GT17, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00063_1392567-1397028' '(at1g74680 : 538.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: exostosin family protein (TAIR:AT3G45400.1); Has 1193 Blast hits to 1185 proteins in 64 species: Archae - 0; Bacteria - 4; Metazoa - 45; Fungi - 4; Plants - 1081; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|66673 : 259.0) no description available & (gnl|cdd|36239 : 254.0) no description available & (reliability: 1076.0) & (original description: Putative BnaA07g22100D, Description = BnaA07g22100D protein, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00085_632238-643423' '(at2g38650 : 444.0) galacturonosyltransferase 7 (GAUT7); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 4 (TAIR:AT5G47780.1). & (gnl|cdd|85496 : 128.0) no description available & (reliability: 888.0) & (original description: Putative JS33, Description = Hexosyltransferase, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00113_700552-703958' '(q43716|ufog_pethy : 854.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (at5g54010 : 342.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G53990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 170.0) no description available & (reliability: 630.0) & (original description: Putative RT, Description = Anthocyanidin 3-O-glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00128_505624-511523' '(at5g15050 : 659.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 926 Blast hits to 925 proteins in 118 species: Archae - 0; Bacteria - 49; Metazoa - 525; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|36018 : 346.0) no description available & (gnl|cdd|66199 : 264.0) no description available & (reliability: 1318.0) & (original description: Putative GLCAT14B, Description = Beta-glucuronosyltransferase GlcAT14B, PFAM = PF02485)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00160_1125887-1132555' '(at1g78800 : 595.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 5 (TAIR:AT5G37180.1); Has 14746 Blast hits to 14703 proteins in 2118 species: Archae - 647; Bacteria - 10061; Metazoa - 282; Fungi - 266; Plants - 467; Viruses - 0; Other Eukaryotes - 3023 (source: NCBI BLink). & (gnl|cdd|36071 : 331.0) no description available & (gnl|cdd|30787 : 115.0) no description available & (reliability: 1190.0) & (original description: Putative alg2, Description = Alpha-1,3/1,6-mannosyltransferase ALG2, PFAM = PF13439;PF00534)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00175_202952-206397' '(at4g15280 : 352.0) UDP-glucosyl transferase 71B5 (UGT71B5); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G15260.1); Has 7674 Blast hits to 7626 proteins in 477 species: Archae - 0; Bacteria - 573; Metazoa - 2069; Fungi - 31; Plants - 4920; Viruses - 24; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|36406 : 191.0) no description available & (p56725|zox_phavu : 152.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 84.6) no description available & (reliability: 704.0) & (original description: Putative GT6, Description = UDP-glucose flavonoid 3-O-glucosyltransferase 6, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00175_209120-212595' '(at3g21790 : 343.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71B8 (TAIR:AT3G21800.1); Has 7258 Blast hits to 7210 proteins in 387 species: Archae - 0; Bacteria - 256; Metazoa - 1953; Fungi - 26; Plants - 4958; Viruses - 11; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|36406 : 202.0) no description available & (p56725|zox_phavu : 146.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 83.1) no description available & (reliability: 686.0) & (original description: Putative UDPG7, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00180_1195085-1198840' '(at1g61050 : 344.0) alpha 1,4-glycosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi stack; CONTAINS InterPro DOMAIN/s: Alpha 1,4-glycosyltransferase conserved region (InterPro:IPR007652), Glycosyltransferase, DXD sugar-binding region (InterPro:IPR007577); BEST Arabidopsis thaliana protein match is: alpha 1,4-glycosyltransferase family protein (TAIR:AT5G01250.1); Has 493 Blast hits to 489 proteins in 121 species: Archae - 2; Bacteria - 96; Metazoa - 240; Fungi - 20; Plants - 92; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|37139 : 333.0) no description available & (gnl|cdd|68155 : 142.0) no description available & (reliability: 688.0) & (original description: Putative BnaC01g39240D, Description = BnaC01g39240D protein, PFAM = PF04488;PF04572)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00207_497516-508790' '(at4g38040 : 282.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G11610.1); Has 1409 Blast hits to 1398 proteins in 111 species: Archae - 0; Bacteria - 12; Metazoa - 341; Fungi - 4; Plants - 961; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|36239 : 199.0) no description available & (gnl|cdd|66673 : 156.0) no description available & (reliability: 564.0) & (original description: Putative EXO, Description = Exostosin-like, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00234_381111-385200' '(at1g71070 : 269.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 951 Blast hits to 950 proteins in 117 species: Archae - 0; Bacteria - 44; Metazoa - 555; Fungi - 0; Plants - 318; Viruses - 14; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|66199 : 178.0) no description available & (gnl|cdd|36018 : 176.0) no description available & (reliability: 538.0) & (original description: Putative Sb03g035990, Description = Putative uncharacterized protein Sb03g035990, PFAM = PF02485)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00270_1487043-1491573' '(at3g21760 : 381.0) Encodes HYR1, a UDP glycosyltransferase (UGT). HYR1 glucosylates hypostatin, an inhibitor of cell expansion in vivo to form a bioactive glucoside.; HYPOSTATIN RESISTANCE 1 (HYR1); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71B6 (TAIR:AT3G21780.1); Has 7489 Blast hits to 7432 proteins in 389 species: Archae - 0; Bacteria - 261; Metazoa - 2177; Fungi - 28; Plants - 4962; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 171.0) no description available & (q43641|ufog_solme : 140.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|79510 : 90.0) no description available & (reliability: 762.0) & (original description: Putative UGT71E1, Description = UDP-glycosyltransferase 71E1, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00273_264217-267302' '(at3g62660 : 577.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 7 (GATL7); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 5 (TAIR:AT1G02720.2); Has 1817 Blast hits to 1811 proteins in 371 species: Archae - 0; Bacteria - 732; Metazoa - 289; Fungi - 4; Plants - 732; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|85496 : 197.0) no description available & (reliability: 1154.0) & (original description: Putative GATL7, Description = Probable galacturonosyltransferase-like 7, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00355_442897-446288' '(at4g14090 : 374.0) The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring.; UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, anthocyanin 5-O-glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: indole-3-acetate beta-D-glucosyltransferase (TAIR:AT4G15550.1); Has 7764 Blast hits to 7700 proteins in 467 species: Archae - 0; Bacteria - 501; Metazoa - 2108; Fungi - 44; Plants - 4999; Viruses - 48; Other Eukaryotes - 64 (source: NCBI BLink). & (q41819|iaag_maize : 243.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 190.0) no description available & (gnl|cdd|79510 : 96.9) no description available & (reliability: 748.0) & (original description: Putative UGT75L6, Description = Crocetin glucosyltransferase, chloroplastic, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00435_301932-305763' '(at1g05170 : 330.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT2G32430.1); Has 1305 Blast hits to 1290 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 665; Fungi - 0; Plants - 601; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|37499 : 269.0) no description available & (gnl|cdd|85659 : 112.0) no description available & (reliability: 628.0) & (original description: Putative PYL11, Description = Hexosyltransferase, PFAM = PF01762)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00449_233588-238654' '(at2g37585 : 169.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G15050.1); Has 846 Blast hits to 846 proteins in 95 species: Archae - 0; Bacteria - 25; Metazoa - 486; Fungi - 0; Plants - 317; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|66199 : 113.0) no description available & (gnl|cdd|36018 : 110.0) no description available & (reliability: 338.0) & (original description: Putative GnT, Description = Core-2/I-branching enzyme, PFAM = PF02485)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00478_633899-636891' '(at1g80290 : 308.0) a member of the Glycosyltransferase Family 64 (according to CAZy Database); Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EXTL2, alpha-1,4-N-acetylhexosaminyltransferase (InterPro:IPR015338); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT3G55830.1); Has 640 Blast hits to 640 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 485; Fungi - 8; Plants - 102; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|72674 : 209.0) no description available & (gnl|cdd|36240 : 152.0) no description available & (reliability: 616.0) & (original description: Putative At1g80290, Description = Glycosyltransferase family protein 64 C3, PFAM = PF09258)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00488_474652-480045' '(at5g62620 : 889.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, sugar binding, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G74800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37498 : 316.0) no description available & (gnl|cdd|84703 : 90.7) no description available & (reliability: 1778.0) & (original description: Putative GALT6, Description = Hydroxyproline O-galactosyltransferase GALT6, PFAM = PF00337;PF01762)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00492_24611-28023' '(p56725|zox_phavu : 517.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36770 : 212.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7907 Blast hits to 7812 proteins in 435 species: Archae - 0; Bacteria - 273; Metazoa - 2293; Fungi - 33; Plants - 5130; Viruses - 108; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 155.0) no description available & (gnl|cdd|79510 : 89.6) no description available & (reliability: 424.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00492_135541-138914' '(p56725|zox_phavu : 485.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g31750 : 192.0) UDP-glucosyl transferase 74D1 (UGT74D1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8199 Blast hits to 8111 proteins in 470 species: Archae - 0; Bacteria - 484; Metazoa - 2414; Fungi - 25; Plants - 5092; Viruses - 117; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36406 : 168.0) no description available & (gnl|cdd|79510 : 91.5) no description available & (reliability: 384.0) & (original description: Putative ZOG3, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00543_211920-217880' '(at5g62620 : 877.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, sugar binding, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G74800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37498 : 313.0) no description available & (gnl|cdd|85659 : 91.9) no description available & (reliability: 1754.0) & (original description: Putative GALT5, Description = Hydroxyproline O-galactosyltransferase GALT5, PFAM = PF00337;PF01762)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00560_516677-523047' '(p56725|zox_phavu : 398.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36780 : 160.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 157.0) no description available & (gnl|cdd|79510 : 81.9) no description available & (reliability: 320.0) & (original description: Putative PGSC0003DMG400032511, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00669_13794-17254' '(at2g36750 : 585.0) UDP-glucosyl transferase 73C1 (UGT73C1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: don-glucosyltransferase 1 (TAIR:AT2G36800.1); Has 7705 Blast hits to 7611 proteins in 415 species: Archae - 0; Bacteria - 205; Metazoa - 2197; Fungi - 31; Plants - 5129; Viruses - 79; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|36406 : 251.0) no description available & (p56725|zox_phavu : 192.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 83.8) no description available & (reliability: 1166.0) & (original description: Putative UGT73C1, Description = UDP-glycosyltransferase 73C1, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00672_103266-107219' '(at5g12890 : 428.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 192.0) no description available & (p56725|zox_phavu : 149.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 856.0) & (original description: Putative UGT92A1, Description = UDP-glycosyltransferase 92A1, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00691_294372-301223' '(at1g06780 : 613.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 6 (GAUT6); FUNCTIONS IN: polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: los glycosyltransferase 5 (TAIR:AT2G30575.1). & (gnl|cdd|85496 : 177.0) no description available & (reliability: 1226.0) & (original description: Putative GAUT6, Description = Probable galacturonosyltransferase 6, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00788_100721-104985' '(at2g43820 : 421.0) Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and athranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F2 are not known, but mutant plants lacking UGT74F2 have a decreased level of SAG and SGE.; UDP-glucosyltransferase 74F2 (UGT74F2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 74 F1 (TAIR:AT2G43840.1); Has 8409 Blast hits to 8329 proteins in 546 species: Archae - 0; Bacteria - 818; Metazoa - 2323; Fungi - 31; Plants - 5038; Viruses - 125; Other Eukaryotes - 74 (source: NCBI BLink). & (q41819|iaag_maize : 342.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 225.0) no description available & (gnl|cdd|79510 : 97.3) no description available & (reliability: 822.0) & (original description: Putative UGT74G1, Description = UDP-glycosyltransferase 74G1, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00788_124588-129067' '(at2g43840 : 447.0) UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside), benzoic acid, quercetin, and athranilate in vitro. UGT74F1 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F1 are not known, but mutant plants lacking UGT74F1 have a decreased level of salicylate glucoside.; UDP-glycosyltransferase 74 F1 (UGT74F1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 74F2 (TAIR:AT2G43820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41819|iaag_maize : 343.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 224.0) no description available & (gnl|cdd|79510 : 95.8) no description available & (reliability: 876.0) & (original description: Putative UGT74G1, Description = UDP-glycosyltransferase 74G1, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00788_192997-196866' '(at2g43820 : 440.0) Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and athranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F2 are not known, but mutant plants lacking UGT74F2 have a decreased level of SAG and SGE.; UDP-glucosyltransferase 74F2 (UGT74F2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 74 F1 (TAIR:AT2G43840.1); Has 8409 Blast hits to 8329 proteins in 546 species: Archae - 0; Bacteria - 818; Metazoa - 2323; Fungi - 31; Plants - 5038; Viruses - 125; Other Eukaryotes - 74 (source: NCBI BLink). & (q41819|iaag_maize : 357.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 224.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 832.0) & (original description: Putative UGT74F2, Description = UDP-glycosyltransferase 74F2, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00906_67102-70705' '(q43641|ufog_solme : 613.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (at5g17050 : 424.0) The At5g17050 encodes a anthocyanidin 3-O-glucosyltransferase which specifically glucosylates the 3-position of the flavonoid C-ring. Anthocyanidins such as cyanidin and pelargonidin as well as flavonols such as kaempferol and quercetin are accepted substrates.; UDP-glucosyl transferase 78D2 (UGT78D2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 78D3 (TAIR:AT5G17030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 189.0) no description available & (gnl|cdd|79510 : 140.0) no description available & (reliability: 764.0) & (original description: Putative GT, Description = Anthocyanidin 3-O-glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00962_295487-320859' '(at1g77810 : 602.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, beta-1,3-galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: Golgi apparatus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G22015.1); Has 1466 Blast hits to 1450 proteins in 99 species: Archae - 0; Bacteria - 2; Metazoa - 868; Fungi - 0; Plants - 552; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|37499 : 404.0) no description available & (gnl|cdd|85659 : 156.0) no description available & (reliability: 1096.0) & (original description: Putative B3GALT7, Description = Beta-1,3-galactosyltransferase 7, PFAM = PF13334;PF01762)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf00980_765308-771054' '(at3g03690 : 496.0) unfertilized embryo sac 7 (UNE7); FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process, double fertilization forming a zygote and endosperm, pollen tube development; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT4G27480.2); Has 941 Blast hits to 940 proteins in 124 species: Archae - 0; Bacteria - 56; Metazoa - 535; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|36018 : 274.0) no description available & (gnl|cdd|66199 : 234.0) no description available & (reliability: 992.0) & (original description: Putative GnT, Description = Xylosyltransferase 1, PFAM = PF02485)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01017_305263-309338' '(at1g05680 : 381.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 285.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 198.0) no description available & (gnl|cdd|79510 : 108.0) no description available & (reliability: 754.0) & (original description: Putative GT, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01036_540403-571192' '(at4g27480 : 590.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT3G15350.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36018 : 307.0) no description available & (gnl|cdd|66199 : 252.0) no description available & (reliability: 1180.0) & (original description: Putative BnaCnng64970D, Description = BnaC07g40910D protein, PFAM = PF02485)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01124_1085168-1092394' '(at3g57630 : 1213.0) exostosin family protein; FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: FRA8 homolog (TAIR:AT5G22940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66673 : 209.0) no description available & (gnl|cdd|36239 : 175.0) no description available & (reliability: 2426.0) & (original description: Putative BnaA09g36940D, Description = BnaA09g36940D protein, PFAM = PF03016;PF07974)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01124_2409012-2412373' '(at5g49690 : 206.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 181.0) no description available & (q43716|ufog_pethy : 180.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|79510 : 86.9) no description available & (reliability: 382.0) & (original description: Putative CsUGT134, Description = UDP-glycosyltransferase 94P1, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01177_554016-562939' '(at4g19900 : 555.0) alpha 1,4-glycosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, Golgi stack; EXPRESSED IN: flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Alpha 1,4-glycosyltransferase conserved region (InterPro:IPR007652), Glycosyltransferase, DXD sugar-binding region (InterPro:IPR007577); BEST Arabidopsis thaliana protein match is: alpha 1,4-glycosyltransferase family protein (TAIR:AT2G38152.1); Has 54113 Blast hits to 14510 proteins in 385 species: Archae - 4; Bacteria - 200; Metazoa - 877; Fungi - 767; Plants - 50641; Viruses - 0; Other Eukaryotes - 1624 (source: NCBI BLink). & (gnl|cdd|37139 : 243.0) no description available & (gnl|cdd|68155 : 98.9) no description available & (reliability: 1110.0) & (original description: Putative GT32A1, Description = Alpha 1,4-glycosyltransferase conserved region, PFAM = PF04572;PF04488)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01188_818875-822359' '(at5g12890 : 325.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p56725|zox_phavu : 155.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|36406 : 150.0) no description available & (gnl|cdd|79510 : 81.5) no description available & (reliability: 650.0) & (original description: Putative UDP, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01225_244495-251830' '(at1g05680 : 448.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 328.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 200.0) no description available & (gnl|cdd|79510 : 110.0) no description available & (reliability: 870.0) & (original description: Putative UGT74E2, Description = UDP-glycosyltransferase 74E2, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01269_1277586-1283296' '(at1g05170 : 650.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT2G32430.1); Has 1305 Blast hits to 1290 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 665; Fungi - 0; Plants - 601; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|37499 : 422.0) no description available & (gnl|cdd|85659 : 164.0) no description available & (reliability: 1238.0) & (original description: Putative B3GALT2, Description = Probable beta-1,3-galactosyltransferase 2, PFAM = PF01762;PF13334)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01273_70585-80689' '(at1g67410 : 511.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT1G74680.1); Has 1249 Blast hits to 1240 proteins in 88 species: Archae - 0; Bacteria - 6; Metazoa - 115; Fungi - 4; Plants - 1041; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (gnl|cdd|36239 : 236.0) no description available & (gnl|cdd|66673 : 225.0) no description available & (reliability: 1022.0) & (original description: Putative ARAD1, Description = Probable arabinosyltransferase ARAD1, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01300_417443-420834' '(at2g16890 : 458.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213), Tudor subgroup (InterPro:IPR018351); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G14860.1); Has 7578 Blast hits to 7495 proteins in 486 species: Archae - 0; Bacteria - 511; Metazoa - 1925; Fungi - 34; Plants - 4955; Viruses - 98; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|36406 : 206.0) no description available & (p56725|zox_phavu : 149.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 916.0) & (original description: Putative UGT90A1, Description = UDP-glycosyltransferase 90A1, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01314_216767-223576' '(at5g15050 : 466.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 926 Blast hits to 925 proteins in 118 species: Archae - 0; Bacteria - 49; Metazoa - 525; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|36018 : 256.0) no description available & (gnl|cdd|66199 : 251.0) no description available & (reliability: 932.0) & (original description: Putative GnT, Description = Xylosyltransferase 1, PFAM = PF02485)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01326_1124647-1130247' '(at5g15050 : 650.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 926 Blast hits to 925 proteins in 118 species: Archae - 0; Bacteria - 49; Metazoa - 525; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|36018 : 341.0) no description available & (gnl|cdd|66199 : 260.0) no description available & (reliability: 1300.0) & (original description: Putative GLCAT14B, Description = Beta-glucuronosyltransferase GlcAT14B, PFAM = PF02485)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01341_61799-65307' '(at4g15480 : 515.0) Encodes a protein that might have sinapic acid:UDP-glucose glucosyltransferase activity.; UGT84A1; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G15490.1); Has 7986 Blast hits to 7909 proteins in 477 species: Archae - 0; Bacteria - 354; Metazoa - 2305; Fungi - 71; Plants - 5077; Viruses - 110; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|36406 : 213.0) no description available & (q41819|iaag_maize : 191.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 86.5) no description available & (reliability: 1030.0) & (original description: Putative GT2, Description = Cinnamate beta-D-glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01386_22394-25809' '(p56725|zox_phavu : 434.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36780 : 186.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 155.0) no description available & (gnl|cdd|79510 : 88.5) no description available & (reliability: 372.0) & (original description: Putative CISZOG1, Description = Cis-zeatin O-glucosyltransferase 1, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01481_34175-43909' '(at5g04500 : 976.0) a member of the Glycosyltransferase Family 64 (according to CAZy Database); glycosyltransferase family protein 47; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: embryo, leaf whorl, sperm cell, flower; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: EXTL2, alpha-1,4-N-acetylhexosaminyltransferase (InterPro:IPR015338); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT3G55830.1); Has 971 Blast hits to 969 proteins in 180 species: Archae - 4; Bacteria - 178; Metazoa - 489; Fungi - 8; Plants - 111; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|36240 : 591.0) no description available & (gnl|cdd|72674 : 280.0) no description available & (reliability: 1952.0) & (original description: Putative At5g04500, Description = Glycosyltransferase family protein 64 protein C5, PFAM = PF09258)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01557_595710-599216' '(p56725|zox_phavu : 435.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at3g50740 : 196.0) UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism.; UDP-glucosyl transferase 72E1 (UGT72E1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G66690.1); Has 8063 Blast hits to 8012 proteins in 453 species: Archae - 0; Bacteria - 455; Metazoa - 2482; Fungi - 35; Plants - 4969; Viruses - 57; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 165.0) no description available & (gnl|cdd|79510 : 90.4) no description available & (reliability: 374.0) & (original description: Putative PGSC0003DMG400035370, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01559_94486-97253' '(at1g07250 : 402.0) UDP-glucosyl transferase 71C4 (UGT71C4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71C3 (TAIR:AT1G07260.1); Has 7587 Blast hits to 7548 proteins in 444 species: Archae - 0; Bacteria - 410; Metazoa - 2119; Fungi - 25; Plants - 4933; Viruses - 39; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 198.0) no description available & (p56725|zox_phavu : 155.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 85.8) no description available & (reliability: 804.0) & (original description: Putative GT3, Description = Putative UDP-glucose flavonoid 3-O-glucosyltransferase 3, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01596_835985-841775' '(at5g61840 : 727.0) GUT1; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT1G27440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36239 : 263.0) no description available & (gnl|cdd|66673 : 171.0) no description available & (reliability: 1454.0) & (original description: Putative IRX10L, Description = Probable beta-1,4-xylosyltransferase IRX10L, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01660_54304-57716' '(at4g15550 : 442.0) UDP-glucose:indole-3-acetate beta-D-glucosyltransferase; indole-3-acetate beta-D-glucosyltransferase (IAGLU); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 75B1 (TAIR:AT1G05560.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q41819|iaag_maize : 256.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 210.0) no description available & (gnl|cdd|79510 : 95.0) no description available & (reliability: 884.0) & (original description: Putative gt2, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01660_230122-233534' '(at4g14090 : 364.0) The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring.; UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, anthocyanin 5-O-glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: indole-3-acetate beta-D-glucosyltransferase (TAIR:AT4G15550.1); Has 7764 Blast hits to 7700 proteins in 467 species: Archae - 0; Bacteria - 501; Metazoa - 2108; Fungi - 44; Plants - 4999; Viruses - 48; Other Eukaryotes - 64 (source: NCBI BLink). & (q41819|iaag_maize : 188.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 188.0) no description available & (gnl|cdd|79510 : 93.9) no description available & (reliability: 728.0) & (original description: Putative UGT75C1, Description = UDP-glycosyltransferase 75C1, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01660_262101-265555' '(at1g05530 : 374.0) Encodes a protein with glucosyltransferase activity with high sequence homology to UGT1 (AT1G05560). It belongs to an UGT subfamily that binds UDP-glucose but not UDP-glucuronate, UDP-galactose, or UDP-rhamnose as the glycosyl donor. UGT2 was shown to be able to use abscisic acid as glycosylation substrate in the presence of UDP-glucose.; UDP-glucosyl transferase 75B2 (UGT75B2); FUNCTIONS IN: UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: sperm cell, root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 75B1 (TAIR:AT1G05560.1); Has 7198 Blast hits to 7135 proteins in 463 species: Archae - 0; Bacteria - 427; Metazoa - 1573; Fungi - 32; Plants - 5007; Viruses - 111; Other Eukaryotes - 48 (source: NCBI BLink). & (q41819|iaag_maize : 248.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 195.0) no description available & (gnl|cdd|79510 : 95.0) no description available & (reliability: 748.0) & (original description: Putative UGT75L6, Description = Crocetin glucosyltransferase, chloroplastic, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01739_385108-394953' '(at1g31070 : 825.0) Encodes a protein that functions as an N-acetylglucosamine-1-phosphate uridylyltransferase that catalyzes the formation of UDP-N-acetylglucosamine (UDP-GlcNAc). This is an essential precursor for glycolipid and glycoprotein synthesis and is also used for regulatory protein modification in signaling pathways. The enzyme can also catalyze the reverse reaction using both UDP-GlcNAc and the less common UDP-N-acetylgalactosamine as substrates.; N-acetylglucosamine-1-phosphate uridylyltransferase 1 (GlcNAc1pUT1); FUNCTIONS IN: UDP-N-acetylglucosamine diphosphorylase activity, UDP-N-acetylgalactosamine diphosphorylase activity; INVOLVED IN: UDP-N-acetylglucosamine metabolic process, UDP-N-acetylgalactosamine metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: N-acetylglucosamine-1-phosphate uridylyltransferase 2 (TAIR:AT2G35020.1); Has 1399 Blast hits to 1393 proteins in 421 species: Archae - 0; Bacteria - 358; Metazoa - 399; Fungi - 277; Plants - 154; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37599 : 584.0) no description available & (gnl|cdd|34006 : 259.0) no description available & (reliability: 1634.0) & (original description: Putative uap1, Description = UDP-N-acetylglucosamine pyrophosphorylase, PFAM = PF01704)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01756_17784-41102' '(at4g01210 : 1136.0) glycosyl transferase family 1 protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G04480.1); Has 816 Blast hits to 811 proteins in 174 species: Archae - 9; Bacteria - 331; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 410 (source: NCBI BLink). & (reliability: 2272.0) & (original description: Putative At4g01210, Description = Glycosyl transferase family 1 protein, PFAM = PF00534)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01763_82416-85828' '(at5g49690 : 205.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 185.0) no description available & (q43716|ufog_pethy : 182.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|79510 : 95.8) no description available & (reliability: 398.0) & (original description: Putative UGT94E5, Description = Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01777_334394-337809' '(p56725|zox_phavu : 421.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36770 : 188.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7907 Blast hits to 7812 proteins in 435 species: Archae - 0; Bacteria - 273; Metazoa - 2293; Fungi - 33; Plants - 5130; Viruses - 108; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 158.0) no description available & (reliability: 376.0) & (original description: Putative ZOG9, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01908_3129-7567' '(at1g74680 : 554.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: exostosin family protein (TAIR:AT3G45400.1); Has 1193 Blast hits to 1185 proteins in 64 species: Archae - 0; Bacteria - 4; Metazoa - 45; Fungi - 4; Plants - 1081; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|36239 : 266.0) no description available & (gnl|cdd|66673 : 247.0) no description available & (reliability: 1108.0) & (original description: Putative At1g74680, Description = At1g74680/F1M20_36, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01908_57823-62571' '(at5g15050 : 489.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 926 Blast hits to 925 proteins in 118 species: Archae - 0; Bacteria - 49; Metazoa - 525; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|36018 : 281.0) no description available & (gnl|cdd|66199 : 237.0) no description available & (reliability: 978.0) & (original description: Putative GnT, Description = Xylosyltransferase 1, PFAM = PF02485)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01922_344891-352907' '(at3g24040 : 449.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 634 Blast hits to 633 proteins in 99 species: Archae - 0; Bacteria - 13; Metazoa - 278; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|36018 : 234.0) no description available & (gnl|cdd|66199 : 216.0) no description available & (reliability: 898.0) & (original description: Putative At3g24040, Description = Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein, PFAM = PF02485)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01933_62320-65648' '(at4g37690 : 501.0) Galactosyl transferase GMA12/MNN10 family protein; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: Galactosyl transferase GMA12/MNN10 family protein (TAIR:AT2G22900.1); Has 507 Blast hits to 506 proteins in 109 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 185; Plants - 285; Viruses - 4; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|39945 : 216.0) no description available & (gnl|cdd|69175 : 187.0) no description available & (reliability: 1002.0) & (original description: Putative GT6, Description = Glycosyltransferase 6, PFAM = PF05637)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01951_82991-87074' '(at3g11340 : 395.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 76C1 (TAIR:AT5G05870.1); Has 7583 Blast hits to 7530 proteins in 440 species: Archae - 0; Bacteria - 352; Metazoa - 2017; Fungi - 25; Plants - 5047; Viruses - 86; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|36406 : 202.0) no description available & (q43641|ufog_solme : 171.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|79510 : 110.0) no description available & (reliability: 790.0) & (original description: Putative UGT76A2, Description = UDP-glucose iridoid glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01980_1023582-1027599' '(at1g22400 : 654.0) UGT85A1; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 7940 Blast hits to 7832 proteins in 421 species: Archae - 0; Bacteria - 227; Metazoa - 2330; Fungi - 36; Plants - 5216; Viruses - 60; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|36406 : 257.0) no description available & (q41819|iaag_maize : 186.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 118.0) no description available & (reliability: 1304.0) & (original description: Putative UGT85A24, Description = 7-deoxyloganetin glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf01998_372277-375671' '(p56725|zox_phavu : 469.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g29730 : 192.0) UDP-glucosyl transferase 71D1 (UGT71D1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G29710.1); Has 7713 Blast hits to 7666 proteins in 413 species: Archae - 0; Bacteria - 339; Metazoa - 2353; Fungi - 25; Plants - 4863; Viruses - 68; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 153.0) no description available & (gnl|cdd|79510 : 98.5) no description available & (reliability: 384.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02008_55768-66424' '(at2g39630 : 493.0) Encodes a putative dolichyl-phosphate β-glucosyltransferase.; Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, protein amino acid glycosylation; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G20575.1); Has 13322 Blast hits to 13314 proteins in 2299 species: Archae - 543; Bacteria - 9870; Metazoa - 265; Fungi - 258; Plants - 96; Viruses - 22; Other Eukaryotes - 2268 (source: NCBI BLink). & (gnl|cdd|38188 : 353.0) no description available & (gnl|cdd|84843 : 89.1) no description available & (reliability: 986.0) & (original description: Putative ALG5, Description = Dolichyl-phosphate beta-glucosyltransferase, PFAM = PF00535)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02085_1855945-1861211' '(at3g46670 : 378.0) UDP-glucosyl transferase 76E11 (UGT76E11); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 76E12 (TAIR:AT3G46660.1); Has 7711 Blast hits to 7649 proteins in 441 species: Archae - 0; Bacteria - 362; Metazoa - 2148; Fungi - 33; Plants - 5036; Viruses - 65; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36406 : 192.0) no description available & (p56725|zox_phavu : 173.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 111.0) no description available & (reliability: 756.0) & (original description: Putative UGT76E2, Description = UDP-glycosyltransferase 76E2, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02165_335924-341576' '(at5g60700 : 1116.0) glycosyltransferase family protein 2; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12260.1); Has 216 Blast hits to 215 proteins in 74 species: Archae - 0; Bacteria - 15; Metazoa - 2; Fungi - 65; Plants - 77; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (reliability: 2232.0) & (original description: Putative BnaA02g06160D, Description = BnaA02g06160D protein, PFAM = )' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02173_27164-30032' '(q43716|ufog_pethy : 854.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (at5g54010 : 342.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G53990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36406 : 163.0) no description available & (reliability: 628.0) & (original description: Putative rt, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02215_533394-537074' '(at3g50760 : 463.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 2 (GATL2); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G19300.1); Has 1885 Blast hits to 1878 proteins in 434 species: Archae - 2; Bacteria - 935; Metazoa - 151; Fungi - 0; Plants - 716; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|85496 : 183.0) no description available & (reliability: 926.0) & (original description: Putative GATL2, Description = Probable galacturonosyltransferase-like 2, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02253_822254-828191' '(at5g15050 : 610.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 926 Blast hits to 925 proteins in 118 species: Archae - 0; Bacteria - 49; Metazoa - 525; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|36018 : 323.0) no description available & (gnl|cdd|66199 : 249.0) no description available & (reliability: 1220.0) & (original description: Putative GLCAT14B, Description = Beta-glucuronosyltransferase GlcAT14B, PFAM = PF02485)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02269_200689-206534' '(at5g01250 : 355.0) alpha 1,4-glycosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi stack; CONTAINS InterPro DOMAIN/s: Alpha 1,4-glycosyltransferase conserved region (InterPro:IPR007652), Glycosyltransferase, DXD sugar-binding region (InterPro:IPR007577); BEST Arabidopsis thaliana protein match is: alpha 1,4-glycosyltransferase family protein (TAIR:AT3G09020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37139 : 336.0) no description available & (gnl|cdd|68155 : 136.0) no description available & (reliability: 710.0) & (original description: Putative BnaA01g30130D, Description = BnaA01g30130D protein, PFAM = PF04572;PF04488)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02289_1091076-1100461' '(at3g01040 : 849.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 13 (GAUT13); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 14 (TAIR:AT5G15470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85496 : 181.0) no description available & (reliability: 1698.0) & (original description: Putative GT8, Description = Hexosyltransferase, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02315_145439-151919' '(at2g36970 : 644.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G28080.1); Has 6237 Blast hits to 6170 proteins in 304 species: Archae - 0; Bacteria - 63; Metazoa - 975; Fungi - 25; Plants - 5115; Viruses - 22; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|36406 : 206.0) no description available & (q41819|iaag_maize : 192.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 80.0) no description available & (reliability: 1288.0) & (original description: Putative UGT86A1, Description = UDP-glycosyltransferase 86A1, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02357_78207-86473' '(at3g58790 : 607.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 15 (GAUT15); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 14 (TAIR:AT5G15470.1); Has 1513 Blast hits to 1502 proteins in 296 species: Archae - 0; Bacteria - 573; Metazoa - 140; Fungi - 8; Plants - 775; Viruses - 2; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|85496 : 165.0) no description available & (reliability: 1214.0) & (original description: Putative GAUT15, Description = Probable galacturonosyltransferase 15, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02358_12070-19948' '(at5g47780 : 806.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 4 (GAUT4); FUNCTIONS IN: polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 1 (TAIR:AT3G61130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85496 : 207.0) no description available & (reliability: 1612.0) & (original description: Putative GAUT4, Description = Probable galacturonosyltransferase 4, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02437_186426-191041' '(at3g21750 : 416.0) Encodes a glucosyltransferase that can attach glucose to a number of hydroxylated phenolic compounds as well as quercetins in vitro; UDP-glucosyl transferase 71B1 (UGT71B1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G21760.1); Has 7577 Blast hits to 7528 proteins in 438 species: Archae - 0; Bacteria - 404; Metazoa - 2188; Fungi - 36; Plants - 4867; Viruses - 24; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|36406 : 210.0) no description available & (q43641|ufog_solme : 154.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|79510 : 83.5) no description available & (reliability: 832.0) & (original description: Putative GT6, Description = UDP-glucose flavonoid 3-O-glucosyltransferase 6, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02459_568793-572202' '(at5g62220 : 442.0) glycosyltransferase 18 (GT18); FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 691 Blast hits to 690 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 667; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (q8h038|katam_orysa : 306.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 239.0) no description available & (gnl|cdd|66673 : 211.0) no description available & (reliability: 884.0) & (original description: Putative GT14, Description = Xyloglucan galactosyltransferase KATAMARI-like protein, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02476_340145-343635' '(at2g15480 : 339.0) UDP-glucosyl transferase 73B5 (UGT73B5); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 73B4 (TAIR:AT2G15490.3). & (gnl|cdd|36406 : 183.0) no description available & (p56725|zox_phavu : 164.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 678.0) & (original description: Putative GAME2, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02476_370700-374205' '(at4g34135 : 330.0) The At4g34135 gene encodes a flavonol 7-O-glucosyltransferase (EC 2.4.1.237) that glucosylates also with a 20 fold lower activity flavonols (kaempferol and quercetin) at the 3-O-position.; UDP-glucosyltransferase 73B2 (UGT73B2); FUNCTIONS IN: flavonol 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: flavonol biosynthetic process, response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B3 (TAIR:AT4G34131.1); Has 4778 Blast hits to 4740 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 4776; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|36406 : 210.0) no description available & (p56725|zox_phavu : 143.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|32004 : 103.0) no description available & (reliability: 660.0) & (original description: Putative SAP1, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02502_884002-887483' '(at2g36800 : 452.0) Encodes a DON-Glucosyltransferase. The UGT73C5 glucosylates both brassinolide and castasterone in the 23-O position. The enzyme is presumably involved in the homeostasis of those steroid hormones hence regulating BR activity. Transgenic plants overexpressing UGT73C5 show a typical BR-deficient phenotype.; don-glucosyltransferase 1 (DOGT1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73C6 (TAIR:AT2G36790.1); Has 7663 Blast hits to 7564 proteins in 401 species: Archae - 0; Bacteria - 196; Metazoa - 2172; Fungi - 32; Plants - 5134; Viruses - 64; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 219.0) no description available & (p56725|zox_phavu : 143.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 93.5) no description available & (reliability: 902.0) & (original description: Putative UGT19, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02537_879684-883233' '(at1g22360 : 658.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 242.0) no description available & (p14726|ufog_horvu : 188.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Bronze-1) - Hordeum vulgare (Barley) & (gnl|cdd|79510 : 128.0) no description available & (reliability: 1316.0) & (original description: Putative UGT85A23, Description = 7-deoxyloganetin glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02537_899848-902369' '(at1g22370 : 244.0) UDP-glucosyl transferase 85A5 (UGT85A5); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A2 (TAIR:AT1G22360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 102.0) no description available & (reliability: 488.0) & (original description: Putative F3GT, Description = Glycosyltransferase, PFAM = )' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02571_120588-125712' '(at5g62620 : 875.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, sugar binding, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G74800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37498 : 307.0) no description available & (gnl|cdd|84703 : 102.0) no description available & (reliability: 1750.0) & (original description: Putative GALT6, Description = Hydroxyproline O-galactosyltransferase GALT6, PFAM = PF01762;PF00337)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02606_512766-518087' '(at2g36970 : 575.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G28080.1); Has 6237 Blast hits to 6170 proteins in 304 species: Archae - 0; Bacteria - 63; Metazoa - 975; Fungi - 25; Plants - 5115; Viruses - 22; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|36406 : 204.0) no description available & (q41819|iaag_maize : 181.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 85.4) no description available & (reliability: 1150.0) & (original description: Putative UGT86A1, Description = UDP-glycosyltransferase 86A1, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02622_707391-713524' '(at5g04500 : 983.0) a member of the Glycosyltransferase Family 64 (according to CAZy Database); glycosyltransferase family protein 47; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: embryo, leaf whorl, sperm cell, flower; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: EXTL2, alpha-1,4-N-acetylhexosaminyltransferase (InterPro:IPR015338); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT3G55830.1); Has 971 Blast hits to 969 proteins in 180 species: Archae - 4; Bacteria - 178; Metazoa - 489; Fungi - 8; Plants - 111; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|36240 : 615.0) no description available & (gnl|cdd|72674 : 281.0) no description available & (reliability: 1966.0) & (original description: Putative At5g04500, Description = Glycosyltransferase family protein 64 protein C5, PFAM = PF09258)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02653_646676-650154' '(at1g22370 : 211.0) UDP-glucosyl transferase 85A5 (UGT85A5); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A2 (TAIR:AT1G22360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 117.0) no description available & (p56725|zox_phavu : 86.7) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 422.0) & (original description: Putative UGT4, Description = Glycosyltransferase, PFAM = )' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02706_74247-118412' '(at2g25300 : 476.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G32120.1); Has 600 Blast hits to 599 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 168; Fungi - 0; Plants - 429; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|37499 : 293.0) no description available & (gnl|cdd|85659 : 100.0) no description available & (reliability: 932.0) & (original description: Putative HPGT2, Description = Hexosyltransferase, PFAM = PF01762;PF13334)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02738_478978-483590' '(at3g02350 : 718.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 9 (GAUT9); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT3G25140.1); Has 1426 Blast hits to 1422 proteins in 244 species: Archae - 0; Bacteria - 444; Metazoa - 141; Fungi - 7; Plants - 818; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|85496 : 151.0) no description available & (reliability: 1436.0) & (original description: Putative GAUT9, Description = Probable galacturonosyltransferase 9, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02751_261362-266172' '(at1g22360 : 649.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 247.0) no description available & (p14726|ufog_horvu : 181.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Bronze-1) - Hordeum vulgare (Barley) & (gnl|cdd|79510 : 112.0) no description available & (reliability: 1298.0) & (original description: Putative UGT85A24, Description = 7-deoxyloganetin glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02791_195848-205061' '(at2g20810 : 820.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 10 (GAUT10); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 11 (TAIR:AT1G18580.1); Has 1414 Blast hits to 1410 proteins in 236 species: Archae - 0; Bacteria - 438; Metazoa - 146; Fungi - 0; Plants - 818; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|85496 : 173.0) no description available & (reliability: 1640.0) & (original description: Putative GAUT10, Description = Probable galacturonosyltransferase 10, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02807_185533-188951' '(at1g07250 : 395.0) UDP-glucosyl transferase 71C4 (UGT71C4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71C3 (TAIR:AT1G07260.1); Has 7587 Blast hits to 7548 proteins in 444 species: Archae - 0; Bacteria - 410; Metazoa - 2119; Fungi - 25; Plants - 4933; Viruses - 39; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 183.0) no description available & (q6jah0|czog_sorbi : 154.0) Putative cis-zeatin O-glucosyltransferase (EC 2.4.1.215) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (gnl|cdd|79510 : 84.2) no description available & (reliability: 790.0) & (original description: Putative UGT71K1, Description = UDP-glycosyltransferase 71K1, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02807_313261-316700' '(at3g21790 : 425.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71B8 (TAIR:AT3G21800.1); Has 7258 Blast hits to 7210 proteins in 387 species: Archae - 0; Bacteria - 256; Metazoa - 1953; Fungi - 26; Plants - 4958; Viruses - 11; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|36406 : 200.0) no description available & (p56725|zox_phavu : 164.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 98.9) no description available & (reliability: 850.0) & (original description: Putative UGT71S3, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf02807_320011-323549' '(at3g21760 : 454.0) Encodes HYR1, a UDP glycosyltransferase (UGT). HYR1 glucosylates hypostatin, an inhibitor of cell expansion in vivo to form a bioactive glucoside.; HYPOSTATIN RESISTANCE 1 (HYR1); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71B6 (TAIR:AT3G21780.1); Has 7489 Blast hits to 7432 proteins in 389 species: Archae - 0; Bacteria - 261; Metazoa - 2177; Fungi - 28; Plants - 4962; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|36406 : 205.0) no description available & (p56725|zox_phavu : 162.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 95.4) no description available & (reliability: 908.0) & (original description: Putative UGT71E1, Description = UDP-glycosyltransferase 71E1, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03012_308730-312538' '(at2g43840 : 434.0) UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside), benzoic acid, quercetin, and athranilate in vitro. UGT74F1 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F1 are not known, but mutant plants lacking UGT74F1 have a decreased level of salicylate glucoside.; UDP-glycosyltransferase 74 F1 (UGT74F1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 74F2 (TAIR:AT2G43820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41819|iaag_maize : 330.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 212.0) no description available & (gnl|cdd|79510 : 101.0) no description available & (reliability: 834.0) & (original description: Putative UGT74F1, Description = UDP-glycosyltransferase 74F1, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03046_382182-385779' '(at2g36770 : 481.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7907 Blast hits to 7812 proteins in 435 species: Archae - 0; Bacteria - 273; Metazoa - 2293; Fungi - 33; Plants - 5130; Viruses - 108; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 225.0) no description available & (p56725|zox_phavu : 185.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 82.7) no description available & (reliability: 962.0) & (original description: Putative UGT73D1, Description = UDP-glycosyltransferase 73D1, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03056_200596-204251' '(at3g02100 : 308.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 7982 Blast hits to 7880 proteins in 431 species: Archae - 0; Bacteria - 322; Metazoa - 2378; Fungi - 47; Plants - 5098; Viruses - 73; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|36406 : 167.0) no description available & (q41819|iaag_maize : 147.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 89.2) no description available & (reliability: 616.0) & (original description: Putative GTK11, Description = UDP-glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03076_102182-108886' '(at2g35100 : 574.0) Putative glycosyltransferase, similar to other CAZy Family 47 proteins. The protein is predicted to be a type 2 membrane protein with a signal anchor and is predicted to be targeted to the secretory pathway and to have a single transmembrane helix near the N terminus; hence, the protein has the features expected for a type II membrane protein targeted to the Golgi vesicles. The gene was shown to be expressed in all tissues but particularly in vascular tissues of leaves and stems.; ARABINAN DEFICIENT 1 (ARAD1); FUNCTIONS IN: transferase activity, transferring glycosyl groups, catalytic activity; INVOLVED IN: pectin biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G44930.2); Has 1290 Blast hits to 1285 proteins in 106 species: Archae - 0; Bacteria - 8; Metazoa - 193; Fungi - 4; Plants - 1016; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|36239 : 229.0) no description available & (gnl|cdd|66673 : 226.0) no description available & (reliability: 1148.0) & (original description: Putative ARAD1, Description = Probable arabinosyltransferase ARAD1, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03106_150766-153893' '(at1g70090 : 565.0) Encodes a protein with putative galacturonosyltransferase activity.; glucosyl transferase family 8 (LGT8); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G24170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85496 : 199.0) no description available & (reliability: 1130.0) & (original description: Putative GATL9, Description = Probable galacturonosyltransferase-like 9, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03188_706506-710074' '(at5g62220 : 461.0) glycosyltransferase 18 (GT18); FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 691 Blast hits to 690 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 667; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (q8h038|katam_orysa : 313.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 271.0) no description available & (gnl|cdd|66673 : 220.0) no description available & (reliability: 922.0) & (original description: Putative BnaA05g10990D, Description = BnaA05g10990D protein, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03223_17098-20573' '(at2g15490 : 363.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 205.0) no description available & (p56725|zox_phavu : 161.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 90.0) no description available & (reliability: 726.0) & (original description: Putative GmSGT2, Description = Soyasapogenol B glucuronide galactosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03340_792483-798257' '(at1g34270 : 644.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G35100.1); Has 1266 Blast hits to 1263 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 186; Fungi - 4; Plants - 1015; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|66673 : 218.0) no description available & (gnl|cdd|36239 : 209.0) no description available & (reliability: 1288.0) & (original description: Putative BnaA09g23110D, Description = BnaA09g23110D protein, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03427_1143726-1147102' '(at4g27570 : 440.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: N-terminal protein myristoylation, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G27560.1); Has 4908 Blast hits to 4874 proteins in 244 species: Archae - 0; Bacteria - 41; Metazoa - 215; Fungi - 17; Plants - 4624; Viruses - 3; Other Eukaryotes - 8 (source: NCBI BLink). & (q43716|ufog_pethy : 351.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 150.0) no description available & (reliability: 854.0) & (original description: Putative 3GGT, Description = Anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03434_170181-173659' '(at4g15480 : 491.0) Encodes a protein that might have sinapic acid:UDP-glucose glucosyltransferase activity.; UGT84A1; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G15490.1); Has 7986 Blast hits to 7909 proteins in 477 species: Archae - 0; Bacteria - 354; Metazoa - 2305; Fungi - 71; Plants - 5077; Viruses - 110; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|36406 : 213.0) no description available & (q41819|iaag_maize : 210.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 86.1) no description available & (reliability: 982.0) & (original description: Putative GT2, Description = Cinnamate beta-D-glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03438_284329-287675' '(at5g65550 : 184.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 161.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|36406 : 160.0) no description available & (reliability: 334.0) & (original description: Putative UGT94E5, Description = Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03536_130108-134527' '(at1g22360 : 177.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 131.0) no description available & (p56725|zox_phavu : 122.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 81.5) no description available & (reliability: 354.0) & (original description: Putative UGT4, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03536_130195-134016' '(at1g22360 : 96.3) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative UGT4, Description = Glycosyltransferase, PFAM = )' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03653_214666-222016' '(at5g67230 : 507.0) Encodes a member of the GT43 family glycosyltransferases involved in glucuronoxylan biosynthesis: AT2G37090 (IRX9) and AT1G27600 (IRX9-L or I9H, IRX9 homolog); AT4G36890 (IRX14) and AT5G67230 (IRX14-L or I14H, IRX14 homolog). They form two functionally non-redundant groups essential for the normal elongation of glucuronoxylan backbone. I9H functions redundantly with IRX9, I14H is redundant with IRX14. IRX9 or I9H do not complement IRX14, IRX14 or I14H do not complement IRX9.; IRREGULAR XYLEM 14-LIKE (IRX14-L); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 43 (InterPro:IPR005027); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G36890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36689 : 239.0) no description available & (gnl|cdd|48336 : 221.0) no description available & (reliability: 1014.0) & (original description: Putative IRX14H, Description = Probable beta-1,4-xylosyltransferase IRX14H, PFAM = PF03360)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03705_260633-269690' '(at1g31070 : 835.0) Encodes a protein that functions as an N-acetylglucosamine-1-phosphate uridylyltransferase that catalyzes the formation of UDP-N-acetylglucosamine (UDP-GlcNAc). This is an essential precursor for glycolipid and glycoprotein synthesis and is also used for regulatory protein modification in signaling pathways. The enzyme can also catalyze the reverse reaction using both UDP-GlcNAc and the less common UDP-N-acetylgalactosamine as substrates.; N-acetylglucosamine-1-phosphate uridylyltransferase 1 (GlcNAc1pUT1); FUNCTIONS IN: UDP-N-acetylglucosamine diphosphorylase activity, UDP-N-acetylgalactosamine diphosphorylase activity; INVOLVED IN: UDP-N-acetylglucosamine metabolic process, UDP-N-acetylgalactosamine metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: N-acetylglucosamine-1-phosphate uridylyltransferase 2 (TAIR:AT2G35020.1); Has 1399 Blast hits to 1393 proteins in 421 species: Archae - 0; Bacteria - 358; Metazoa - 399; Fungi - 277; Plants - 154; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37599 : 585.0) no description available & (gnl|cdd|34006 : 261.0) no description available & (reliability: 1654.0) & (original description: Putative uap1, Description = UDP-N-acetylglucosamine pyrophosphorylase, PFAM = PF01704)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03706_381102-384160' '(at3g62660 : 450.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 7 (GATL7); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 5 (TAIR:AT1G02720.2); Has 1817 Blast hits to 1811 proteins in 371 species: Archae - 0; Bacteria - 732; Metazoa - 289; Fungi - 4; Plants - 732; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|85496 : 180.0) no description available & (reliability: 900.0) & (original description: Putative PGSC0003DMG400031840, Description = Hexosyltransferase, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03709_478859-482389' '(p56725|zox_phavu : 342.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g15480 : 157.0) UDP-glucosyl transferase 73B5 (UGT73B5); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 73B4 (TAIR:AT2G15490.3). & (gnl|cdd|36406 : 143.0) no description available & (gnl|cdd|79510 : 86.5) no description available & (reliability: 314.0) & (original description: Putative GT2, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03723_290280-295992' '(at1g05170 : 633.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT2G32430.1); Has 1305 Blast hits to 1290 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 665; Fungi - 0; Plants - 601; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|37499 : 418.0) no description available & (gnl|cdd|85659 : 172.0) no description available & (reliability: 1144.0) & (original description: Putative B3GALT2, Description = Probable beta-1,3-galactosyltransferase 2, PFAM = PF13334;PF01762)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03772_145956-149977' '(at4g16745 : 606.0) Exostosin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G19670.1). & (gnl|cdd|36239 : 313.0) no description available & (gnl|cdd|66673 : 216.0) no description available & (reliability: 1212.0) & (original description: Putative MED24, Description = Exostosin family protein, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03801_273516-283741' '(at4g38040 : 154.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G11610.1); Has 1409 Blast hits to 1398 proteins in 111 species: Archae - 0; Bacteria - 12; Metazoa - 341; Fungi - 4; Plants - 961; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|36239 : 124.0) no description available & (gnl|cdd|66673 : 101.0) no description available & (reliability: 308.0) & (original description: Putative PGSC0003DMG400015688, Description = Exostosin family protein, putative isoform 1, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03860_177664-180941' '(at2g38150 : 353.0) alpha 1,4-glycosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, Golgi stack; CONTAINS InterPro DOMAIN/s: Alpha 1,4-glycosyltransferase conserved region (InterPro:IPR007652), Glycosyltransferase, DXD sugar-binding region (InterPro:IPR007577); BEST Arabidopsis thaliana protein match is: alpha 1,4-glycosyltransferase family protein (TAIR:AT5G01250.1); Has 454 Blast hits to 450 proteins in 114 species: Archae - 0; Bacteria - 88; Metazoa - 237; Fungi - 18; Plants - 94; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|37139 : 332.0) no description available & (gnl|cdd|68155 : 131.0) no description available & (reliability: 706.0) & (original description: Putative BnaA01g30130D, Description = BnaA01g30130D protein, PFAM = PF04572;PF04488)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03924_86726-89973' '(at5g61840 : 654.0) GUT1; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT1G27440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36239 : 258.0) no description available & (gnl|cdd|66673 : 167.0) no description available & (reliability: 1308.0) & (original description: Putative IRX10L, Description = Probable beta-1,4-xylosyltransferase IRX10L, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03969_191782-194344' '(at1g05530 : 118.0) Encodes a protein with glucosyltransferase activity with high sequence homology to UGT1 (AT1G05560). It belongs to an UGT subfamily that binds UDP-glucose but not UDP-glucuronate, UDP-galactose, or UDP-rhamnose as the glycosyl donor. UGT2 was shown to be able to use abscisic acid as glycosylation substrate in the presence of UDP-glucose.; UDP-glucosyl transferase 75B2 (UGT75B2); FUNCTIONS IN: UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: sperm cell, root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 75B1 (TAIR:AT1G05560.1); Has 7198 Blast hits to 7135 proteins in 463 species: Archae - 0; Bacteria - 427; Metazoa - 1573; Fungi - 32; Plants - 5007; Viruses - 111; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative 5GT, Description = Glycosyltransferase, PFAM = )' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf03983_169854-173212' '(p56725|zox_phavu : 375.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g15490 : 121.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 89.2) no description available & (reliability: 242.0) & (original description: Putative GT2, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04001_153539-160784' '(at3g57630 : 1214.0) exostosin family protein; FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: FRA8 homolog (TAIR:AT5G22940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66673 : 214.0) no description available & (gnl|cdd|36239 : 174.0) no description available & (reliability: 2428.0) & (original description: Putative BnaA09g36940D, Description = BnaA09g36940D protein, PFAM = PF07974;PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04187_134062-137462' '(at5g03490 : 459.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G51210.1); Has 6070 Blast hits to 5962 proteins in 306 species: Archae - 0; Bacteria - 104; Metazoa - 824; Fungi - 18; Plants - 5054; Viruses - 30; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|36406 : 191.0) no description available & (p56725|zox_phavu : 172.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 918.0) & (original description: Putative UGT89A2, Description = UDP-glycosyltransferase 89A2, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04192_60803-64862' '(at4g16745 : 613.0) Exostosin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G19670.1). & (gnl|cdd|36239 : 314.0) no description available & (gnl|cdd|66673 : 219.0) no description available & (reliability: 1226.0) & (original description: Putative At5g20260, Description = Probable glycosyltransferase At5g20260, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04209_224792-228270' '(at5g59070 : 583.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G19460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30787 : 92.0) no description available & (reliability: 1166.0) & (original description: Putative GT4A1, Description = Glycosyltransferase, CAZy family GT4, PFAM = PF13439;PF00534)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04294_505845-512150' '(at4g38270 : 776.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 3 (GAUT3); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 1 (TAIR:AT3G61130.1). & (gnl|cdd|85496 : 192.0) no description available & (reliability: 1552.0) & (original description: Putative GAUT3, Description = Probable galacturonosyltransferase 3, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04337_163914-169292' '(at5g19670 : 702.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G25820.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36239 : 340.0) no description available & (gnl|cdd|66673 : 217.0) no description available & (reliability: 1404.0) & (original description: Putative MED24, Description = Exostosin family protein, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04384_603835-607802' '(at1g61050 : 346.0) alpha 1,4-glycosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi stack; CONTAINS InterPro DOMAIN/s: Alpha 1,4-glycosyltransferase conserved region (InterPro:IPR007652), Glycosyltransferase, DXD sugar-binding region (InterPro:IPR007577); BEST Arabidopsis thaliana protein match is: alpha 1,4-glycosyltransferase family protein (TAIR:AT5G01250.1); Has 493 Blast hits to 489 proteins in 121 species: Archae - 2; Bacteria - 96; Metazoa - 240; Fungi - 20; Plants - 92; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|37139 : 328.0) no description available & (gnl|cdd|68155 : 143.0) no description available & (reliability: 692.0) & (original description: Putative BnaC01g39240D, Description = BnaC01g39240D protein, PFAM = PF04488;PF04572)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04404_161556-164980' '(p56725|zox_phavu : 452.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g36770 : 194.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7907 Blast hits to 7812 proteins in 435 species: Archae - 0; Bacteria - 273; Metazoa - 2293; Fungi - 33; Plants - 5130; Viruses - 108; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 143.0) no description available & (gnl|cdd|79510 : 88.5) no description available & (reliability: 388.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04404_335285-339125' '(p56725|zox_phavu : 445.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g15490 : 180.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 136.0) no description available & (gnl|cdd|79510 : 85.0) no description available & (reliability: 360.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04477_213743-221693' '(at4g26940 : 180.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G05170.1); Has 729 Blast hits to 729 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 285; Fungi - 1; Plants - 429; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|37499 : 100.0) no description available & (reliability: 360.0) & (original description: Putative PYL11, Description = Hexosyltransferase, PFAM = PF01762;PF13334)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04537_9133-22963' '(at4g01210 : 1139.0) glycosyl transferase family 1 protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G04480.1); Has 816 Blast hits to 811 proteins in 174 species: Archae - 9; Bacteria - 331; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 410 (source: NCBI BLink). & (reliability: 2278.0) & (original description: Putative At4g01210, Description = Glycosyl transferase family 1 protein, PFAM = PF00534)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04607_789697-793064' '(at2g22900 : 552.0) Galactosyl transferase GMA12/MNN10 family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: Galactosyl transferase GMA12/MNN10 family protein (TAIR:AT4G37690.1); Has 459 Blast hits to 458 proteins in 96 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 139; Plants - 283; Viruses - 4; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|39945 : 234.0) no description available & (gnl|cdd|69175 : 205.0) no description available & (reliability: 1104.0) & (original description: Putative GT7, Description = Putative glycosyltransferase 7, PFAM = PF05637)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04607_810473-813801' '(at4g37690 : 494.0) Galactosyl transferase GMA12/MNN10 family protein; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: Galactosyl transferase GMA12/MNN10 family protein (TAIR:AT2G22900.1); Has 507 Blast hits to 506 proteins in 109 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 185; Plants - 285; Viruses - 4; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|39945 : 218.0) no description available & (gnl|cdd|69175 : 189.0) no description available & (reliability: 988.0) & (original description: Putative GMGT2, Description = Putative galactomannan galactosyl transferase, PFAM = PF05637)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04875_238020-242096' '(at2g36780 : 572.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 238.0) no description available & (p56725|zox_phavu : 165.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 80.8) no description available & (reliability: 1144.0) & (original description: Putative UGT73C3, Description = UDP-glycosyltransferase 73C3, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04886_471960-478461' '(at2g37585 : 482.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G15050.1); Has 846 Blast hits to 846 proteins in 95 species: Archae - 0; Bacteria - 25; Metazoa - 486; Fungi - 0; Plants - 317; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|36018 : 288.0) no description available & (gnl|cdd|66199 : 238.0) no description available & (reliability: 964.0) & (original description: Putative GLCAT14C, Description = Beta-glucuronosyltransferase GlcAT14C, PFAM = PF02485)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04931_109554-112408' '(at5g62220 : 293.0) glycosyltransferase 18 (GT18); FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 691 Blast hits to 690 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 667; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (q8h038|katam_orysa : 230.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 151.0) no description available & (gnl|cdd|66673 : 134.0) no description available & (reliability: 586.0) & (original description: Putative GT18, Description = Exostosin family protein, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04940_123504-126946' '(at3g21800 : 332.0) UDP-glucosyl transferase 71B8 (UGT71B8); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, quercetin 4'-O-glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G21790.1); Has 7042 Blast hits to 6994 proteins in 367 species: Archae - 0; Bacteria - 212; Metazoa - 1805; Fungi - 25; Plants - 4944; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|36406 : 195.0) no description available & (p56725|zox_phavu : 148.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 85.4) no description available & (reliability: 664.0) & (original description: Putative UGT71A15, Description = UDP-glycosyltransferase 71A15, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf04989_200663-205238' '(at4g27480 : 580.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT3G15350.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36018 : 325.0) no description available & (gnl|cdd|66199 : 255.0) no description available & (reliability: 1160.0) & (original description: Putative GLCAT14A, Description = Beta-glucuronosyltransferase GlcAT14A, PFAM = PF02485)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf05250_163698-173017' '(at1g06780 : 640.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 6 (GAUT6); FUNCTIONS IN: polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: los glycosyltransferase 5 (TAIR:AT2G30575.1). & (gnl|cdd|85496 : 171.0) no description available & (reliability: 1280.0) & (original description: Putative GAUT6, Description = Probable galacturonosyltransferase 6, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf05308_214978-219917' '(at3g02100 : 402.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 7982 Blast hits to 7880 proteins in 431 species: Archae - 0; Bacteria - 322; Metazoa - 2378; Fungi - 47; Plants - 5098; Viruses - 73; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|36406 : 198.0) no description available & (q41819|iaag_maize : 163.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 99.2) no description available & (reliability: 804.0) & (original description: Putative UGT83A1, Description = UDP-glycosyltransferase 83A1, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf05417_50291-54351' '(at1g63450 : 618.0) root hair specific 8 (RHS8); FUNCTIONS IN: catalytic activity; LOCATED IN: membrane; EXPRESSED IN: root hair, root; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G41250.1); Has 717 Blast hits to 713 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 686; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (q8h038|katam_orysa : 342.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 290.0) no description available & (gnl|cdd|66673 : 286.0) no description available & (reliability: 1236.0) & (original description: Putative GT16, Description = Xyloglucan-specific galacturonosyltransferase 1, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf05764_78488-87429' '(at1g75420 : 611.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G19710.1); Has 7008 Blast hits to 7002 proteins in 1487 species: Archae - 264; Bacteria - 4740; Metazoa - 98; Fungi - 57; Plants - 126; Viruses - 0; Other Eukaryotes - 1723 (source: NCBI BLink). & (gnl|cdd|36071 : 323.0) no description available & (gnl|cdd|84842 : 81.9) no description available & (reliability: 1180.0) & (original description: Putative GT4A2, Description = Glycosyltransferase, CAZy family GT4, PFAM = PF00534;PF16994)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf05955_453178-461929' '(at1g78800 : 627.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 5 (TAIR:AT5G37180.1); Has 14746 Blast hits to 14703 proteins in 2118 species: Archae - 647; Bacteria - 10061; Metazoa - 282; Fungi - 266; Plants - 467; Viruses - 0; Other Eukaryotes - 3023 (source: NCBI BLink). & (gnl|cdd|36071 : 365.0) no description available & (gnl|cdd|30787 : 125.0) no description available & (reliability: 1254.0) & (original description: Putative alg2, Description = Alpha-1,3/1,6-mannosyltransferase ALG2, PFAM = PF00534;PF13439)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06233_200146-203871' '(at3g02100 : 411.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 7982 Blast hits to 7880 proteins in 431 species: Archae - 0; Bacteria - 322; Metazoa - 2378; Fungi - 47; Plants - 5098; Viruses - 73; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|36406 : 187.0) no description available & (q41819|iaag_maize : 157.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 88.8) no description available & (reliability: 822.0) & (original description: Putative UGT83A1, Description = UDP-glycosyltransferase 83A1, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06277_464966-468486' '(at5g59070 : 544.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G19460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30787 : 94.3) no description available & (reliability: 1088.0) & (original description: Putative BnaC06g23790D, Description = BnaC06g23790D protein, PFAM = PF00534;PF13439)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06280_138066-141151' '(at3g28340 : 490.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 10 (GATL10); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: glucosyl transferase family 8 (TAIR:AT1G70090.2); Has 2215 Blast hits to 2207 proteins in 459 species: Archae - 2; Bacteria - 1092; Metazoa - 267; Fungi - 4; Plants - 737; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|85496 : 189.0) no description available & (reliability: 938.0) & (original description: Putative GATL2, Description = Probable galacturonosyltransferase-like 2, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06344_38693-42120' '(at4g34131 : 530.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 234.0) no description available & (p56725|zox_phavu : 201.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 91.2) no description available & (reliability: 1060.0) & (original description: Putative TOGT1, Description = Scopoletin glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06374_118528-123791' '(at3g22250 : 450.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; EXPRESSED IN: pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G22400.1); Has 6488 Blast hits to 6427 proteins in 402 species: Archae - 0; Bacteria - 208; Metazoa - 1301; Fungi - 24; Plants - 4818; Viruses - 90; Other Eukaryotes - 47 (source: NCBI BLink). & (gnl|cdd|36406 : 187.0) no description available & (q43641|ufog_solme : 138.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|79510 : 108.0) no description available & (reliability: 900.0) & (original description: Putative UGT82A1, Description = UDP-glycosyltransferase 82A1, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06388_383274-386755' '(at1g73880 : 512.0) UDP-glucosyl transferase 89B1 (UGT89B1); FUNCTIONS IN: in 7 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G51210.1); Has 6052 Blast hits to 5982 proteins in 308 species: Archae - 0; Bacteria - 87; Metazoa - 884; Fungi - 31; Plants - 4945; Viruses - 61; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|36406 : 199.0) no description available & (p56725|zox_phavu : 181.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 85.4) no description available & (reliability: 1024.0) & (original description: Putative UGT89B2, Description = UDP-glycosyltransferase 89B2, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06408_561244-565227' '(at3g46670 : 386.0) UDP-glucosyl transferase 76E11 (UGT76E11); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 76E12 (TAIR:AT3G46660.1); Has 7711 Blast hits to 7649 proteins in 441 species: Archae - 0; Bacteria - 362; Metazoa - 2148; Fungi - 33; Plants - 5036; Viruses - 65; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36406 : 200.0) no description available & (p56725|zox_phavu : 171.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 110.0) no description available & (reliability: 772.0) & (original description: Putative UGT76A2, Description = UDP-glucose iridoid glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06441_224755-235099' '(at5g47780 : 831.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 4 (GAUT4); FUNCTIONS IN: polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 1 (TAIR:AT3G61130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85496 : 204.0) no description available & (reliability: 1662.0) & (original description: Putative GAUT4, Description = Probable galacturonosyltransferase 4, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06631_125743-131406' '(at3g15940 : 705.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G52420.1). & (gnl|cdd|36071 : 164.0) no description available & (gnl|cdd|30787 : 85.8) no description available & (reliability: 1410.0) & (original description: Putative 1g52420, Description = AT3g15940/MVC8_7, PFAM = PF16994;PF00534)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06753_215039-218370' '(at4g22580 : 603.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT4G13990.1); Has 709 Blast hits to 706 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 4; Plants - 670; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (q8h038|katam_orysa : 244.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 244.0) no description available & (gnl|cdd|66673 : 235.0) no description available & (reliability: 1206.0) & (original description: Putative GT19, Description = Probable xyloglucan galactosyltransferase GT19, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06778_601344-607574' '(at1g77810 : 526.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, beta-1,3-galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: Golgi apparatus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G22015.1); Has 1466 Blast hits to 1450 proteins in 99 species: Archae - 0; Bacteria - 2; Metazoa - 868; Fungi - 0; Plants - 552; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|37499 : 386.0) no description available & (gnl|cdd|85659 : 154.0) no description available & (reliability: 958.0) & (original description: Putative B3GALT7, Description = Beta-1,3-galactosyltransferase 7, PFAM = PF13334;PF01762)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06809_159204-163275' '(at2g36760 : 513.0) UDP-glucosyl transferase 73C2 (UGT73C2); FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: flower, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7948 Blast hits to 7837 proteins in 437 species: Archae - 0; Bacteria - 325; Metazoa - 2303; Fungi - 35; Plants - 5121; Viruses - 97; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36406 : 258.0) no description available & (p56725|zox_phavu : 150.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 81.5) no description available & (reliability: 1026.0) & (original description: Putative UGT73C2, Description = UDP-glycosyltransferase 73C2, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06942_222360-226740' '(at2g30140 : 461.0) UDP-Glycosyltransferase superfamily protein; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G30150.1); Has 7928 Blast hits to 7876 proteins in 486 species: Archae - 0; Bacteria - 504; Metazoa - 2238; Fungi - 27; Plants - 5010; Viruses - 79; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36406 : 180.0) no description available & (q41819|iaag_maize : 177.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (reliability: 922.0) & (original description: Putative UGT87A2, Description = UDP-glycosyltransferase 87A2, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06968_41145-46211' '(at4g16745 : 599.0) Exostosin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G19670.1). & (gnl|cdd|36239 : 320.0) no description available & (gnl|cdd|66673 : 221.0) no description available & (reliability: 1198.0) & (original description: Putative MED24, Description = Exostosin family protein, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf06996_260548-264721' '(at3g62660 : 411.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 7 (GATL7); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 5 (TAIR:AT1G02720.2); Has 1817 Blast hits to 1811 proteins in 371 species: Archae - 0; Bacteria - 732; Metazoa - 289; Fungi - 4; Plants - 732; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|85496 : 183.0) no description available & (reliability: 822.0) & (original description: Putative GATL7, Description = Probable galacturonosyltransferase-like 7, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf07089_244139-247527' '(p56725|zox_phavu : 429.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g15490 : 188.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 152.0) no description available & (gnl|cdd|79510 : 81.1) no description available & (reliability: 376.0) & (original description: Putative ZOG1, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf07089_278058-281237' '(p56725|zox_phavu : 426.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at2g15490 : 196.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (gnl|cdd|36406 : 156.0) no description available & (gnl|cdd|79510 : 82.7) no description available & (reliability: 392.0) & (original description: Putative CISZOG1, Description = Cis-zeatin O-glucosyltransferase 1, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf07191_287302-290699' '(at1g68470 : 516.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 782 Blast hits to 782 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 758; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (q8h038|katam_orysa : 333.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 257.0) no description available & (gnl|cdd|66673 : 234.0) no description available & (reliability: 1032.0) & (original description: Putative GT17, Description = Probable xyloglucan galactosyltransferase GT17, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf07231_123013-126362' '(at5g07720 : 748.0) Galactosyl transferase GMA12/MNN10 family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: xyloglucan xylosyltransferase 5 (TAIR:AT1G74380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39945 : 385.0) no description available & (gnl|cdd|69175 : 226.0) no description available & (reliability: 1496.0) & (original description: Putative XXT3, Description = Probable xyloglucan 6-xylosyltransferase 3, PFAM = PF05637)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf07247_34426-39114' '(at3g15350 : 627.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT1G53100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36018 : 338.0) no description available & (gnl|cdd|66199 : 267.0) no description available & (reliability: 1254.0) & (original description: Putative GLCAT14B, Description = Beta-glucuronosyltransferase GlcAT14B, PFAM = PF02485)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf07437_274686-277844' '(at1g70090 : 532.0) Encodes a protein with putative galacturonosyltransferase activity.; glucosyl transferase family 8 (LGT8); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G24170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85496 : 193.0) no description available & (reliability: 1064.0) & (original description: Putative GATL9, Description = Probable galacturonosyltransferase-like 9, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf07563_250606-253929' '(at4g34131 : 490.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 243.0) no description available & (p56725|zox_phavu : 179.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 980.0) & (original description: Putative TOGT1, Description = Scopoletin glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf07579_279138-285608' '(at5g61840 : 740.0) GUT1; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT1G27440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36239 : 263.0) no description available & (gnl|cdd|66673 : 167.0) no description available & (reliability: 1480.0) & (original description: Putative IRX10L, Description = Probable beta-1,4-xylosyltransferase IRX10L, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf07585_17143-23538' '(at1g22340 : 528.0) UDP-glucosyl transferase 85A7 (UGT85A7); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A2 (TAIR:AT1G22360.1); Has 7763 Blast hits to 7662 proteins in 424 species: Archae - 0; Bacteria - 289; Metazoa - 2112; Fungi - 32; Plants - 5212; Viruses - 58; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|36406 : 227.0) no description available & (q41819|iaag_maize : 167.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 112.0) no description available & (reliability: 1056.0) & (original description: Putative UGT85A24, Description = 7-deoxyloganetin glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf07639_354106-362353' '(at2g44660 : 627.0) ALG6, ALG8 glycosyltransferase family; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, endoplasmic reticulum membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyltransferase, ALG6/ALG8 (InterPro:IPR004856); BEST Arabidopsis thaliana protein match is: ALG6, ALG8 glycosyltransferase family (TAIR:AT5G38460.2); Has 667 Blast hits to 660 proteins in 181 species: Archae - 0; Bacteria - 16; Metazoa - 273; Fungi - 247; Plants - 67; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|37787 : 469.0) no description available & (gnl|cdd|79991 : 324.0) no description available & (reliability: 1254.0) & (original description: Putative alg8, Description = Dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase, PFAM = PF03155)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf07678_278173-285564' '(at3g58790 : 591.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 15 (GAUT15); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 14 (TAIR:AT5G15470.1); Has 1513 Blast hits to 1502 proteins in 296 species: Archae - 0; Bacteria - 573; Metazoa - 140; Fungi - 8; Plants - 775; Viruses - 2; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|85496 : 164.0) no description available & (reliability: 1182.0) & (original description: Putative GAUT15, Description = Probable galacturonosyltransferase 15, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf07695_73177-78805' '(at4g38040 : 209.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G11610.1); Has 1409 Blast hits to 1398 proteins in 111 species: Archae - 0; Bacteria - 12; Metazoa - 341; Fungi - 4; Plants - 961; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|36239 : 182.0) no description available & (gnl|cdd|66673 : 147.0) no description available & (reliability: 418.0) & (original description: Putative GT47C6-1, Description = Glycosyltransferase-like protein, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf07736_251615-255471' '(at1g63450 : 591.0) root hair specific 8 (RHS8); FUNCTIONS IN: catalytic activity; LOCATED IN: membrane; EXPRESSED IN: root hair, root; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G41250.1); Has 717 Blast hits to 713 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 686; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (q8h038|katam_orysa : 353.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|66673 : 291.0) no description available & (gnl|cdd|36239 : 286.0) no description available & (reliability: 1182.0) & (original description: Putative GT20, Description = Probable xyloglucan galactosyltransferase GT20, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf08002_153823-160687' '(at3g01040 : 816.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 13 (GAUT13); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 14 (TAIR:AT5G15470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85496 : 184.0) no description available & (reliability: 1632.0) & (original description: Putative GAUT12, Description = Probable galacturonosyltransferase 12, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf08142_62954-66417' '(at1g73160 : 627.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G19460.1); Has 13084 Blast hits to 13074 proteins in 2221 species: Archae - 678; Bacteria - 10413; Metazoa - 93; Fungi - 132; Plants - 161; Viruses - 0; Other Eukaryotes - 1607 (source: NCBI BLink). & (gnl|cdd|30787 : 108.0) no description available & (gnl|cdd|36327 : 90.3) no description available & (reliability: 1254.0) & (original description: Putative GT4A1, Description = Glycosyltransferase, CAZy family GT4, PFAM = PF13439;PF00534)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf08198_34144-40123' '(at3g15940 : 691.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G52420.1). & (gnl|cdd|36071 : 162.0) no description available & (gnl|cdd|30787 : 84.3) no description available & (reliability: 1382.0) & (original description: Putative 1g52420, Description = Putative glycosyltransferase ypjH, PFAM = PF16994;PF00534)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf08280_96665-101551' '(at4g16710 : 237.0) glycosyltransferase family protein 28; FUNCTIONS IN: carbohydrate binding, transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, biosynthetic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28, C-terminal (InterPro:IPR007235); Has 643 Blast hits to 638 proteins in 315 species: Archae - 10; Bacteria - 244; Metazoa - 125; Fungi - 122; Plants - 50; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (gnl|cdd|38559 : 196.0) no description available & (gnl|cdd|86543 : 115.0) no description available & (reliability: 474.0) & (original description: Putative alg13, Description = MGC84616 protein, PFAM = PF04101)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf08355_227206-235122' '(at4g38040 : 657.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G11610.1); Has 1409 Blast hits to 1398 proteins in 111 species: Archae - 0; Bacteria - 12; Metazoa - 341; Fungi - 4; Plants - 961; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|36239 : 270.0) no description available & (gnl|cdd|66673 : 228.0) no description available & (reliability: 1314.0) & (original description: Putative EXO, Description = Exostosin family protein, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf08467_380719-385952' '(at1g22360 : 308.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 207.0) no description available & (p16165|ufo2_maize : 159.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Bronze-1) (Bz-Mc2 allele) - Zea mays (Maize) & (gnl|cdd|79510 : 106.0) no description available & (reliability: 616.0) & (original description: Putative UGT709C2, Description = 7-deoxyloganetic acid glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf08549_187200-200266' '(at1g22400 : 276.0) UGT85A1; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 7940 Blast hits to 7832 proteins in 421 species: Archae - 0; Bacteria - 227; Metazoa - 2330; Fungi - 36; Plants - 5216; Viruses - 60; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|36406 : 187.0) no description available & (p56725|zox_phavu : 154.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 83.1) no description available & (reliability: 542.0) & (original description: Putative PNGT2, Description = Uncharacterized glucosyltransferase 2, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf08835_95983-102728' '(at1g22370 : 187.0) UDP-glucosyl transferase 85A5 (UGT85A5); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A2 (TAIR:AT1G22360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36406 : 113.0) no description available & (q41819|iaag_maize : 84.3) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (reliability: 374.0) & (original description: Putative UGT4, Description = Glycosyltransferase, PFAM = )' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf09016_25542-43186' '(at5g15050 : 289.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 926 Blast hits to 925 proteins in 118 species: Archae - 0; Bacteria - 49; Metazoa - 525; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|36018 : 187.0) no description available & (gnl|cdd|66199 : 165.0) no description available & (reliability: 578.0) & (original description: Putative GnT, Description = Xylosyltransferase 1, PFAM = PF02485)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf09184_306997-312657' '(gnl|cdd|36406 : 158.0) no description available & (at2g18570 : 157.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G18560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q43716|ufog_pethy : 145.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (reliability: 302.0) & (original description: Putative bfgt1, Description = Glycosyltransferase, PFAM = PF08268;PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf09372_34614-41856' '(at5g38460 : 581.0) ALG6, ALG8 glycosyltransferase family; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; LOCATED IN: endoplasmic reticulum membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyltransferase, ALG6/ALG8 (InterPro:IPR004856); BEST Arabidopsis thaliana protein match is: ALG6, ALG8 glycosyltransferase family (TAIR:AT2G44660.1). & (gnl|cdd|37786 : 505.0) no description available & (gnl|cdd|79991 : 351.0) no description available & (reliability: 1162.0) & (original description: Putative alg6, Description = Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase, PFAM = PF03155)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf09445_163884-168851' '(at5g25820 : 587.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; LOCATED IN: membrane; EXPRESSED IN: stem, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT4G32790.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36239 : 322.0) no description available & (gnl|cdd|66673 : 224.0) no description available & (reliability: 1174.0) & (original description: Putative At5g25820, Description = Exostosin family protein, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf09445_190895-195574' '(at4g32790 : 530.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G25820.1); Has 1344 Blast hits to 1329 proteins in 116 species: Archae - 0; Bacteria - 12; Metazoa - 289; Fungi - 4; Plants - 927; Viruses - 5; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|36239 : 320.0) no description available & (gnl|cdd|66673 : 212.0) no description available & (reliability: 1060.0) & (original description: Putative BnaC09g44990D, Description = BnaC09g44990D protein, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf09554_99272-105941' '(at3g01040 : 798.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 13 (GAUT13); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 14 (TAIR:AT5G15470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85496 : 180.0) no description available & (reliability: 1596.0) & (original description: Putative GAUT14, Description = Probable galacturonosyltransferase 14, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf09773_125974-135251' '(at2g39630 : 509.0) Encodes a putative dolichyl-phosphate β-glucosyltransferase.; Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, protein amino acid glycosylation; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G20575.1); Has 13322 Blast hits to 13314 proteins in 2299 species: Archae - 543; Bacteria - 9870; Metazoa - 265; Fungi - 258; Plants - 96; Viruses - 22; Other Eukaryotes - 2268 (source: NCBI BLink). & (gnl|cdd|38188 : 353.0) no description available & (gnl|cdd|84843 : 88.3) no description available & (reliability: 1018.0) & (original description: Putative ALG5, Description = Dolichyl-phosphate beta-glucosyltransferase, PFAM = PF00535)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf09791_50340-53377' '(at3g50760 : 464.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 2 (GATL2); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G19300.1); Has 1885 Blast hits to 1878 proteins in 434 species: Archae - 2; Bacteria - 935; Metazoa - 151; Fungi - 0; Plants - 716; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|85496 : 178.0) no description available & (reliability: 928.0) & (original description: Putative PGSC0003DMG400010088, Description = Hexosyltransferase, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf09822_11856-15632' '(at1g05680 : 388.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 293.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 202.0) no description available & (gnl|cdd|79510 : 118.0) no description available & (reliability: 762.0) & (original description: Putative UGT74P1, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf09822_212562-216935' '(at1g05680 : 318.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 236.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 176.0) no description available & (gnl|cdd|79510 : 113.0) no description available & (reliability: 622.0) & (original description: Putative PGT, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf09822_212586-216989' '(at1g05680 : 403.0) Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.; Uridine diphosphate glycosyltransferase 74E2 (UGT74E2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 8397 Blast hits to 8309 proteins in 513 species: Archae - 0; Bacteria - 605; Metazoa - 2499; Fungi - 31; Plants - 5061; Viruses - 123; Other Eukaryotes - 78 (source: NCBI BLink). & (q41819|iaag_maize : 315.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|36406 : 196.0) no description available & (gnl|cdd|79510 : 114.0) no description available & (reliability: 794.0) & (original description: Putative UGT74P1, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf10328_48815-57609' '(at4g38040 : 280.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G11610.1); Has 1409 Blast hits to 1398 proteins in 111 species: Archae - 0; Bacteria - 12; Metazoa - 341; Fungi - 4; Plants - 961; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|36239 : 203.0) no description available & (gnl|cdd|66673 : 162.0) no description available & (reliability: 560.0) & (original description: Putative EXO, Description = Exostosin-like, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf10328_83018-97196' '(at4g38040 : 271.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G11610.1); Has 1409 Blast hits to 1398 proteins in 111 species: Archae - 0; Bacteria - 12; Metazoa - 341; Fungi - 4; Plants - 961; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|36239 : 194.0) no description available & (gnl|cdd|66673 : 160.0) no description available & (reliability: 542.0) & (original description: Putative EXO, Description = Exostosin-like, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf11008_99362-102786' '(p56725|zox_phavu : 459.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34138 : 191.0) UDP-glucosyl transferase 73B1 (UGT73B1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B3 (TAIR:AT4G34131.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 151.0) no description available & (gnl|cdd|79510 : 98.9) no description available & (reliability: 382.0) & (original description: Putative ZOG7, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf11008_286968-290814' '(p56725|zox_phavu : 483.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34131 : 177.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 137.0) no description available & (gnl|cdd|79510 : 89.6) no description available & (reliability: 354.0) & (original description: Putative ZOG1, Description = Zeatin O-glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf11154_32127-37012' '(at4g16710 : 246.0) glycosyltransferase family protein 28; FUNCTIONS IN: carbohydrate binding, transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, biosynthetic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28, C-terminal (InterPro:IPR007235); Has 643 Blast hits to 638 proteins in 315 species: Archae - 10; Bacteria - 244; Metazoa - 125; Fungi - 122; Plants - 50; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (gnl|cdd|38559 : 194.0) no description available & (gnl|cdd|86543 : 112.0) no description available & (reliability: 492.0) & (original description: Putative alg13, Description = MGC84616 protein, PFAM = PF04101)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf11183_40495-43967' '(at3g53150 : 607.0) UDP-glucosyl transferase 73D1 (UGT73D1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: stem, sepal, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: don-glucosyltransferase 1 (TAIR:AT2G36800.1); Has 7415 Blast hits to 7339 proteins in 377 species: Archae - 0; Bacteria - 180; Metazoa - 2057; Fungi - 21; Plants - 5064; Viruses - 36; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|36406 : 239.0) no description available & (p56725|zox_phavu : 167.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1214.0) & (original description: Putative UGT73D1, Description = UDP-glycosyltransferase 73D1, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf11469_16054-19847' '(at2g29040 : 548.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 4124 Blast hits to 3335 proteins in 318 species: Archae - 0; Bacteria - 277; Metazoa - 1010; Fungi - 350; Plants - 587; Viruses - 35; Other Eukaryotes - 1865 (source: NCBI BLink). & (q8h038|katam_orysa : 528.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (gnl|cdd|36239 : 315.0) no description available & (gnl|cdd|66673 : 306.0) no description available & (reliability: 1096.0) & (original description: Putative Os03g0144800, Description = Xyloglucan galactosyltransferase KATAMARI1 homolog, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf11980_383750-389132' '(at1g71070 : 545.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 951 Blast hits to 950 proteins in 117 species: Archae - 0; Bacteria - 44; Metazoa - 555; Fungi - 0; Plants - 318; Viruses - 14; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|36018 : 274.0) no description available & (gnl|cdd|66199 : 235.0) no description available & (reliability: 1090.0) & (original description: Putative pco120288, Description = BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein, PFAM = PF02485)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf12290_140493-145341' '(p56725|zox_phavu : 360.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34138 : 181.0) UDP-glucosyl transferase 73B1 (UGT73B1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B3 (TAIR:AT4G34131.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 133.0) no description available & (reliability: 362.0) & (original description: Putative PGSC0003DMG400016773, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf12290_157761-160507' '(p56725|zox_phavu : 270.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34138 : 164.0) UDP-glucosyl transferase 73B1 (UGT73B1); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, abscisic acid glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B3 (TAIR:AT4G34131.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 110.0) no description available & (gnl|cdd|79510 : 81.1) no description available & (reliability: 328.0) & (original description: Putative GT2, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf12673_132961-138842' '(at5g11130 : 450.0) Exostosin family protein; FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G20260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36239 : 283.0) no description available & (gnl|cdd|66673 : 180.0) no description available & (reliability: 900.0) & (original description: Putative XGD1, Description = Exostosin family protein, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf12858_157672-174303' '(at1g21480 : 720.0) Exostosin family protein; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: FRA8 homolog (TAIR:AT5G22940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36239 : 178.0) no description available & (gnl|cdd|66673 : 132.0) no description available & (reliability: 1440.0) & (original description: Putative At1g21480, Description = Exostosin family protein, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf12858_159075-174221' '(at1g21480 : 433.0) Exostosin family protein; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: FRA8 homolog (TAIR:AT5G22940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36239 : 99.0) no description available & (reliability: 866.0) & (original description: Putative LOC100192822, Description = Glycosyltransferase, family GT47, PFAM = PF03016)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf12919_56571-60157' '(at4g34131 : 503.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 242.0) no description available & (p56725|zox_phavu : 186.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 93.1) no description available & (reliability: 1006.0) & (original description: Putative gt5, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf12919_165422-168849' '(at4g34131 : 535.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36406 : 229.0) no description available & (p56725|zox_phavu : 202.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 95.4) no description available & (reliability: 1070.0) & (original description: Putative TOGT1, Description = Scopoletin glucosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf13179_11088-14437' '(at5g07720 : 743.0) Galactosyl transferase GMA12/MNN10 family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: xyloglucan xylosyltransferase 5 (TAIR:AT1G74380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39945 : 393.0) no description available & (gnl|cdd|69175 : 230.0) no description available & (reliability: 1486.0) & (original description: Putative XXT3, Description = Probable xyloglucan 6-xylosyltransferase 3, PFAM = PF05637)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf13710_282548-286011' '(at3g50740 : 437.0) UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism.; UDP-glucosyl transferase 72E1 (UGT72E1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G66690.1); Has 8063 Blast hits to 8012 proteins in 453 species: Archae - 0; Bacteria - 455; Metazoa - 2482; Fungi - 35; Plants - 4969; Viruses - 57; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 185.0) no description available & (p56725|zox_phavu : 173.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|79510 : 84.2) no description available & (reliability: 836.0) & (original description: Putative GT5, Description = Anthocyanidin 3-O-glucosyltransferase 5, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf14996_105772-109163' '(at1g73880 : 409.0) UDP-glucosyl transferase 89B1 (UGT89B1); FUNCTIONS IN: in 7 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G51210.1); Has 6052 Blast hits to 5982 proteins in 308 species: Archae - 0; Bacteria - 87; Metazoa - 884; Fungi - 31; Plants - 4945; Viruses - 61; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|36406 : 184.0) no description available & (q8rxa5|czog2_maize : 153.0) Cis-zeatin O-glucosyltransferase 2 (EC 2.4.1.215) (cisZOG2) - Zea mays (Maize) & (reliability: 818.0) & (original description: Putative UGT89B2, Description = UDP-glycosyltransferase 89B2, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf15870_73266-79395' '(at5g04500 : 950.0) a member of the Glycosyltransferase Family 64 (according to CAZy Database); glycosyltransferase family protein 47; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: embryo, leaf whorl, sperm cell, flower; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: EXTL2, alpha-1,4-N-acetylhexosaminyltransferase (InterPro:IPR015338); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT3G55830.1); Has 971 Blast hits to 969 proteins in 180 species: Archae - 4; Bacteria - 178; Metazoa - 489; Fungi - 8; Plants - 111; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|36240 : 605.0) no description available & (gnl|cdd|72674 : 279.0) no description available & (reliability: 1900.0) & (original description: Putative At5g04500, Description = Glycosyltransferase family protein 64 protein C5, PFAM = PF09258)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf16733_199052-204833' '(at1g18580 : 823.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase 11 (GAUT11); FUNCTIONS IN: polygalacturonate 4-alpha-galacturonosyltransferase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 10 (TAIR:AT2G20810.1); Has 1461 Blast hits to 1453 proteins in 263 species: Archae - 0; Bacteria - 484; Metazoa - 143; Fungi - 0; Plants - 819; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|85496 : 185.0) no description available & (reliability: 1646.0) & (original description: Putative GAUT11, Description = Probable galacturonosyltransferase 11, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf17597_151847-155154' '(gnl|cdd|36406 : 170.0) no description available & (at4g34131 : 162.0) UDP-glucosyl transferase 73B3 (UGT73B3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: response to cyclopentenone, response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 73B2 (TAIR:AT4G34135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43716|ufog_pethy : 142.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (gnl|cdd|32004 : 83.2) no description available & (reliability: 324.0) & (original description: Putative NSGT1, Description = Glycosyltransferase, PFAM = PF00201)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf18061_95304-98395' '(at3g50760 : 471.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 2 (GATL2); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G19300.1); Has 1885 Blast hits to 1878 proteins in 434 species: Archae - 2; Bacteria - 935; Metazoa - 151; Fungi - 0; Plants - 716; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|85496 : 189.0) no description available & (reliability: 942.0) & (original description: Putative GATL2, Description = Probable galacturonosyltransferase-like 2, PFAM = PF01501)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf22566_49386-55715' '(at4g27480 : 566.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT3G15350.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36018 : 316.0) no description available & (gnl|cdd|66199 : 250.0) no description available & (reliability: 1132.0) & (original description: Putative GnT, Description = N-acetylglucosaminyltransferase, PFAM = PF02485)' T '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'niben101scf27793_53919-59921' '(at1g22380 : 352.0) Encodes a putative UDP-glucosyl transferase. At1g22380 was initially identified as encoding the protein AAF87154, which has been classified as a bHLH protein (AtbHLH152). Subsequently it has been found that the AAF87154 protein appears to be encoded by the AT1G23970 genomic locus.; UDP-glucosyl transferase 85A3 (UGT85A3); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G22400.1); Has 7656 Blast hits to 7558 proteins in 363 species: Archae - 0; Bacteria - 87; Metazoa - 2193; Fungi - 26; Plants - 5186; Viruses - 99; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36406 : 213.0) no description available & (q41819|iaag_maize : 186.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (gnl|cdd|79510 : 102.0) no description available & (reliability: 704.0) & (original description: Putative UGT709C2, Description = 7-deoxyloganetic acid glucosyltransferase, PFAM = PF00201)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'nbv0.3scaffold5910_39008-42953' '(at3g18080 : 764.0) B-S glucosidase 44 (BGLU44); FUNCTIONS IN: in 6 functions; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cytosolic ribosome, cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 43 (TAIR:AT3G18070.1); Has 11220 Blast hits to 10898 proteins in 1459 species: Archae - 142; Bacteria - 7700; Metazoa - 714; Fungi - 202; Plants - 1462; Viruses - 0; Other Eukaryotes - 1000 (source: NCBI BLink). & (gnl|cdd|35845 : 646.0) no description available & (gnl|cdd|84629 : 490.0) no description available & (p49235|bglc_maize : 369.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1528.0) & (original description: Putative BGLU44, Description = Beta-glucosidase 44, PFAM = PF00232)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'nbv0.3scaffold34985_4601-16903' '(gnl|cdd|35845 : 628.0) no description available & (at1g02850 : 598.0) beta glucosidase 11 (BGLU11); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 10 (TAIR:AT4G27830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84629 : 458.0) no description available & (p29092|myr3_sinal : 335.0) Myrosinase MB3 precursor (EC 3.2.1.147) (Sinigrinase) (Thioglucosidase) - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 1196.0) & (original description: Putative BGLU11, Description = Beta-glucosidase 11, PFAM = PF00232)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'nbv0.3scaffold38022_1557-8324' '(at4g28320 : 416.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT2G20680.1); Has 750 Blast hits to 740 proteins in 186 species: Archae - 6; Bacteria - 225; Metazoa - 0; Fungi - 183; Plants - 306; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|33716 : 106.0) no description available & (reliability: 832.0) & (original description: Putative MAN6, Description = Mannan endo-1,4-beta-mannosidase 6, PFAM = PF00150)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'nbv0.3scaffold52188_2552-10547' '(at5g20950 : 959.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 254.0) no description available & (reliability: 1778.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF01915;PF00933)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'nbv0.5scaffold2065_109195-119909' '(at5g36890 : 542.0) beta glucosidase 42 (BGLU42); FUNCTIONS IN: cation binding, beta-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: cellulose catabolic process, carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1, beta-glucosidase (InterPro:IPR017736), Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 40 (TAIR:AT1G26560.1); Has 11583 Blast hits to 11219 proteins in 1500 species: Archae - 142; Bacteria - 8039; Metazoa - 717; Fungi - 205; Plants - 1468; Viruses - 0; Other Eukaryotes - 1012 (source: NCBI BLink). & (gnl|cdd|35845 : 525.0) no description available & (gnl|cdd|84629 : 410.0) no description available & (p49235|bglc_maize : 313.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1084.0) & (original description: Putative AH1, Description = Beta-glucosidase, PFAM = PF00232)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'nbv0.5scaffold3026_264519-270870' '(at5g04885 : 865.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20950.2); Has 9897 Blast hits to 9186 proteins in 1453 species: Archae - 69; Bacteria - 6037; Metazoa - 14; Fungi - 1479; Plants - 480; Viruses - 0; Other Eukaryotes - 1818 (source: NCBI BLink). & (gnl|cdd|31661 : 253.0) no description available & (reliability: 1730.0) & (original description: Putative exg1, Description = Exoglucanase, PFAM = PF01915;PF00933)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'nbv0.5scaffold6004_113193-118883' '(q5h7p5|ebm_lillo : 439.0) Mannosylglycoprotein endo-beta-mannosidase (EC 3.2.1.152) (Endo-beta-mannosidase) [Contains: Mannosylglycoprotein endo-beta-mannosidase 31 kDa subunit; Mannosylglycoprotein endo-beta-mannosidase 28 kDa subunit; Mannosylglycoprotein endo- & (at1g09010 : 417.0) glycoside hydrolase family 2 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (InterPro:IPR006102), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase family 2, TIM barrel (InterPro:IPR006103), Glycoside hydrolase, family 2 (InterPro:IPR006101), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Galactose-binding domain-like (InterPro:IPR008979), Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain (InterPro:IPR013812), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 5072 Blast hits to 5044 proteins in 1162 species: Archae - 18; Bacteria - 3983; Metazoa - 234; Fungi - 319; Plants - 43; Viruses - 2; Other Eukaryotes - 473 (source: NCBI BLink). & (reliability: 834.0) & (original description: Putative ebm, Description = Glycosyl hydrolase, PFAM = )' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'nbv0.5scaffold6491_41185-52701' '(at3g06510 : 824.0) Encodes a protein with beta-glucosidase activity, mutants show increased sensitivity to freezing; SENSITIVE TO FREEZING 2 (SFR2); FUNCTIONS IN: beta-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to freezing; LOCATED IN: chloroplast outer membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 27 (TAIR:AT3G60120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35845 : 223.0) no description available & (gnl|cdd|32615 : 218.0) no description available & (p49235|bglc_maize : 118.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1648.0) & (original description: Putative sfr2, Description = Putative beta-glycosidase, PFAM = PF00232)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben044scf00001654ctg000_11897-16773' '(at5g66460 : 249.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33716 : 84.3) no description available & (reliability: 496.0) & (original description: Putative MAN6, Description = Endo-beta-1,4-mannanase, PFAM = PF00150)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben044scf00009379ctg008_6619-19968' '(q5h7p5|ebm_lillo : 1028.0) Mannosylglycoprotein endo-beta-mannosidase (EC 3.2.1.152) (Endo-beta-mannosidase) [Contains: Mannosylglycoprotein endo-beta-mannosidase 31 kDa subunit; Mannosylglycoprotein endo-beta-mannosidase 28 kDa subunit; Mannosylglycoprotein endo- & (at1g09010 : 990.0) glycoside hydrolase family 2 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (InterPro:IPR006102), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase family 2, TIM barrel (InterPro:IPR006103), Glycoside hydrolase, family 2 (InterPro:IPR006101), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Galactose-binding domain-like (InterPro:IPR008979), Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain (InterPro:IPR013812), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 5072 Blast hits to 5044 proteins in 1162 species: Archae - 18; Bacteria - 3983; Metazoa - 234; Fungi - 319; Plants - 43; Viruses - 2; Other Eukaryotes - 473 (source: NCBI BLink). & (gnl|cdd|33061 : 125.0) no description available & (gnl|cdd|37441 : 105.0) no description available & (reliability: 1980.0) & (original description: Putative ebm, Description = Mannosylglycoprotein endo-beta-mannosidase, PFAM = PF02836;PF00703)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben044scf00009835ctg003_1-8106' '(at5g36890 : 518.0) beta glucosidase 42 (BGLU42); FUNCTIONS IN: cation binding, beta-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: cellulose catabolic process, carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1, beta-glucosidase (InterPro:IPR017736), Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 40 (TAIR:AT1G26560.1); Has 11583 Blast hits to 11219 proteins in 1500 species: Archae - 142; Bacteria - 8039; Metazoa - 717; Fungi - 205; Plants - 1468; Viruses - 0; Other Eukaryotes - 1012 (source: NCBI BLink). & (gnl|cdd|35845 : 478.0) no description available & (gnl|cdd|84629 : 353.0) no description available & (p49235|bglc_maize : 299.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1036.0) & (original description: Putative BG1, Description = Beta-glucosidase, PFAM = PF00232)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben044scf00011140ctg006_11842-18139' '(at5g20950 : 958.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 263.0) no description available & (reliability: 1726.0) & (original description: Putative exg1, Description = Exoglucanase, PFAM = PF00933;PF01915)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben044scf00018150ctg009_1538-3978' '(at4g21760 : 94.4) beta-glucosidase 47 (BGLU47); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-glucosidase 45 (TAIR:AT1G61810.1); Has 11354 Blast hits to 11023 proteins in 1477 species: Archae - 142; Bacteria - 7853; Metazoa - 716; Fungi - 199; Plants - 1433; Viruses - 0; Other Eukaryotes - 1011 (source: NCBI BLink). & (gnl|cdd|84629 : 86.8) no description available & (gnl|cdd|35845 : 86.5) no description available & (reliability: 188.8) & (original description: Putative bglC, Description = Beta-glucosidase, PFAM = PF00232)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben044scf00024745ctg007_8005-13474' '(at5g04885 : 860.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20950.2); Has 9897 Blast hits to 9186 proteins in 1453 species: Archae - 69; Bacteria - 6037; Metazoa - 14; Fungi - 1479; Plants - 480; Viruses - 0; Other Eukaryotes - 1818 (source: NCBI BLink). & (gnl|cdd|31661 : 251.0) no description available & (reliability: 1720.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF01915;PF00933)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben044scf00026996ctg001_1-2617' '(at4g31140 : 291.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G58090.1); Has 2782 Blast hits to 2712 proteins in 151 species: Archae - 0; Bacteria - 6; Metazoa - 4; Fungi - 39; Plants - 2723; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (p52409|e13b_wheat : 101.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 100.0) no description available & (reliability: 574.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF07983;PF00332)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben044scf00027738ctg002_8436-12483' '(at1g18650 : 111.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 3 (PDCB3); CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glucan endo-1,3-beta-glucosidase-like protein 3 (TAIR:AT5G08000.1); Has 1473 Blast hits to 1425 proteins in 72 species: Archae - 4; Bacteria - 6; Metazoa - 5; Fungi - 46; Plants - 1391; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|87420 : 110.0) no description available & (p52409|e13b_wheat : 89.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 208.0) & (original description: Putative PDCB3, Description = PLASMODESMATA CALLOSE-BINDING PROTEIN 3, PFAM = PF07983)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben044scf00030454ctg001_39519-44445' '(at5g20870 : 602.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 2792 Blast hits to 2718 proteins in 160 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 51; Plants - 2724; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 234.0) no description available & (q03773|e13a_soybn : 208.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Glycine max (Soybean) & (reliability: 1204.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF00332;PF07983)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben044scf00031468ctg002_1588-4319' '(at5g43710 : 111.0) Glycosyl hydrolase family 47 protein; FUNCTIONS IN: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity, alpha-mannosidase activity, calcium ion binding; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 47 (InterPro:IPR001382); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 47 protein (TAIR:AT1G27520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative MNS4, Description = alpha-1,2-Mannosidase, PFAM = )' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben044scf00038474ctg001_6759-13979' '(at3g06510 : 645.0) Encodes a protein with beta-glucosidase activity, mutants show increased sensitivity to freezing; SENSITIVE TO FREEZING 2 (SFR2); FUNCTIONS IN: beta-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to freezing; LOCATED IN: chloroplast outer membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 27 (TAIR:AT3G60120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35845 : 208.0) no description available & (gnl|cdd|32615 : 182.0) no description available & (p49235|bglc_maize : 99.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1290.0) & (original description: Putative sfr2, Description = Beta-glucosidase-like SFR2, chloroplastic, PFAM = PF00232)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben044scf00038474ctg003_1-1811' '(at3g06510 : 135.0) Encodes a protein with beta-glucosidase activity, mutants show increased sensitivity to freezing; SENSITIVE TO FREEZING 2 (SFR2); FUNCTIONS IN: beta-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to freezing; LOCATED IN: chloroplast outer membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 27 (TAIR:AT3G60120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative sfr2, Description = Putative beta-glycosidase, PFAM = )' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben044scf00057981ctg003_1-5835' '(at2g20680 : 644.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT4G28320.1); Has 827 Blast hits to 815 proteins in 205 species: Archae - 18; Bacteria - 244; Metazoa - 38; Fungi - 187; Plants - 310; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|33716 : 113.0) no description available & (reliability: 1288.0) & (original description: Putative MAN2, Description = Mannan endo-1,4-beta-mannosidase 2, PFAM = PF00150)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101ctg16306_1074-6521' '(gnl|cdd|35845 : 587.0) no description available & (at1g61810 : 515.0) beta-glucosidase 45 (BGLU45); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lignin biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 46 (TAIR:AT1G61820.1). & (gnl|cdd|84629 : 450.0) no description available & (p49235|bglc_maize : 352.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1030.0) & (original description: Putative BGLU18, Description = Beta-glucosidase 18, PFAM = PF00232)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf00168_958291-1002938' '(at3g54440 : 1580.0) glycoside hydrolase family 2 protein; FUNCTIONS IN: carbohydrate binding, cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: male gametophyte, guard cell; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (InterPro:IPR006102), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 42, domain 5 (InterPro:IPR004199), Glycoside hydrolase family 2, TIM barrel (InterPro:IPR006103), Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Glycoside hydrolase, family 2 (InterPro:IPR006101), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Galactose-binding domain-like (InterPro:IPR008979), Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain (InterPro:IPR013812), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781). & (gnl|cdd|83064 : 916.0) no description available & (reliability: 3160.0) & (original description: Putative At3g54440, Description = Glycoside hydrolase family 2 protein, PFAM = PF16353;PF02929;PF00703;PF02836;PF02837)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf00283_399742-408240' '(at1g16610 : 124.0) Encodes SR45, a member of the highly conserved family of serine/arginine-rich (SR) proteins, which play key roles in pre-mRNA splicing and other aspects of RNA metabolism. SR45 is a spliceosome protein, interacts with SR33 and the U1-70K protein of the U1 snRNP. Also involved in plant sugar response. sr45-1 mutation confers hypersensitivity to glucose during early seedling growth.; arginine/serine-rich 45 (SR45); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: arginine/serine-rich protein-related (TAIR:AT1G79100.1). & (reliability: 248.0) & (original description: Putative SR45, Description = Arginine/serine-rich 45 protein, PFAM = PF00076)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf00286_128199-155258' '(at5g43710 : 845.0) Glycosyl hydrolase family 47 protein; FUNCTIONS IN: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity, alpha-mannosidase activity, calcium ion binding; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 47 (InterPro:IPR001382); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 47 protein (TAIR:AT1G27520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37640 : 644.0) no description available & (gnl|cdd|85516 : 381.0) no description available & (reliability: 1690.0) & (original description: Putative MNS4, Description = Alpha-mannosidase I MNS4, PFAM = PF01532;PF01532)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf00286_128994-131303' '(at5g43710 : 130.0) Glycosyl hydrolase family 47 protein; FUNCTIONS IN: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity, alpha-mannosidase activity, calcium ion binding; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 47 (InterPro:IPR001382); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 47 protein (TAIR:AT1G27520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37640 : 111.0) no description available & (gnl|cdd|85516 : 89.9) no description available & (reliability: 260.0) & (original description: Putative edem2, Description = alpha-1,2-Mannosidase, PFAM = PF01532)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf00286_568477-576548' '(at5g20950 : 621.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 160.0) no description available & (reliability: 1164.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF00933;PF01915)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf00339_905367-910626' '(at1g02850 : 627.0) beta glucosidase 11 (BGLU11); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 10 (TAIR:AT4G27830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35845 : 623.0) no description available & (gnl|cdd|84629 : 440.0) no description available & (p29092|myr3_sinal : 347.0) Myrosinase MB3 precursor (EC 3.2.1.147) (Sinigrinase) (Thioglucosidase) - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 1254.0) & (original description: Putative BGLU11, Description = Beta-glucosidase 11, PFAM = PF00232)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf00426_276463-285784' '(at4g28320 : 400.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT2G20680.1); Has 750 Blast hits to 740 proteins in 186 species: Archae - 6; Bacteria - 225; Metazoa - 0; Fungi - 183; Plants - 306; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|33716 : 98.9) no description available & (reliability: 800.0) & (original description: Putative MAN6, Description = Mannan endo-1,4-beta-mannosidase 6, PFAM = PF00150)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf00451_331640-343593' '(at5g36890 : 692.0) beta glucosidase 42 (BGLU42); FUNCTIONS IN: cation binding, beta-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: cellulose catabolic process, carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1, beta-glucosidase (InterPro:IPR017736), Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 40 (TAIR:AT1G26560.1); Has 11583 Blast hits to 11219 proteins in 1500 species: Archae - 142; Bacteria - 8039; Metazoa - 717; Fungi - 205; Plants - 1468; Viruses - 0; Other Eukaryotes - 1012 (source: NCBI BLink). & (gnl|cdd|35845 : 653.0) no description available & (gnl|cdd|84629 : 514.0) no description available & (p49235|bglc_maize : 399.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1384.0) & (original description: Putative BGLU42, Description = Beta-glucosidase 42, PFAM = PF00232)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf00635_589644-634000' '(at1g26560 : 709.0) beta glucosidase 40 (BGLU40); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 41 (TAIR:AT5G54570.1); Has 11482 Blast hits to 11079 proteins in 1478 species: Archae - 142; Bacteria - 7937; Metazoa - 716; Fungi - 201; Plants - 1474; Viruses - 0; Other Eukaryotes - 1012 (source: NCBI BLink). & (gnl|cdd|35845 : 687.0) no description available & (gnl|cdd|84629 : 495.0) no description available & (p49235|bglc_maize : 365.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1418.0) & (original description: Putative BGLU6, Description = Beta-glucosidase 6, PFAM = PF00232)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf00856_114462-128637' '(at5g04885 : 956.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20950.2); Has 9897 Blast hits to 9186 proteins in 1453 species: Archae - 69; Bacteria - 6037; Metazoa - 14; Fungi - 1479; Plants - 480; Viruses - 0; Other Eukaryotes - 1818 (source: NCBI BLink). & (gnl|cdd|31661 : 249.0) no description available & (reliability: 1912.0) & (original description: Putative exg1, Description = Exoglucanase, PFAM = PF00933;PF01915)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf00905_1416647-1423698' '(at2g20680 : 644.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT4G28320.1); Has 827 Blast hits to 815 proteins in 205 species: Archae - 18; Bacteria - 244; Metazoa - 38; Fungi - 187; Plants - 310; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|33716 : 113.0) no description available & (reliability: 1288.0) & (original description: Putative MAN2, Description = Mannan endo-1,4-beta-mannosidase 2, PFAM = PF00150)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf01181_150173-155011' '(at3g18080 : 750.0) B-S glucosidase 44 (BGLU44); FUNCTIONS IN: in 6 functions; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cytosolic ribosome, cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 43 (TAIR:AT3G18070.1); Has 11220 Blast hits to 10898 proteins in 1459 species: Archae - 142; Bacteria - 7700; Metazoa - 714; Fungi - 202; Plants - 1462; Viruses - 0; Other Eukaryotes - 1000 (source: NCBI BLink). & (gnl|cdd|35845 : 650.0) no description available & (gnl|cdd|84629 : 500.0) no description available & (p49235|bglc_maize : 364.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1500.0) & (original description: Putative BGLU44, Description = Beta-glucosidase 44, PFAM = PF00232)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf01373_93900-99248' '(gnl|cdd|35845 : 591.0) no description available & (at1g61810 : 516.0) beta-glucosidase 45 (BGLU45); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lignin biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 46 (TAIR:AT1G61820.1). & (gnl|cdd|84629 : 454.0) no description available & (p49235|bglc_maize : 348.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1032.0) & (original description: Putative BGLU14, Description = Probable inactive beta-glucosidase 14, PFAM = PF00232)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf01373_270582-310783' '(gnl|cdd|35845 : 603.0) no description available & (at1g61810 : 512.0) beta-glucosidase 45 (BGLU45); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lignin biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 46 (TAIR:AT1G61820.1). & (gnl|cdd|84629 : 469.0) no description available & (p49235|bglc_maize : 367.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1024.0) & (original description: Putative BGLU18, Description = Beta-glucosidase 18, PFAM = PF00232)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf02123_499219-515669' '(gnl|cdd|35845 : 713.0) no description available & (at2g44480 : 617.0) beta glucosidase 17 (BGLU17); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: stem, hypocotyl, sepal, male gametophyte, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 15 (TAIR:AT2G44450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84629 : 515.0) no description available & (p49235|bglc_maize : 469.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1234.0) & (original description: Putative AH1, Description = Glycoside hydrolase family 1 protein, PFAM = PF00232)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf02123_1017182-1027214' '(gnl|cdd|35845 : 698.0) no description available & (at2g44480 : 563.0) beta glucosidase 17 (BGLU17); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: stem, hypocotyl, sepal, male gametophyte, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 15 (TAIR:AT2G44450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84629 : 494.0) no description available & (p49235|bglc_maize : 455.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1126.0) & (original description: Putative BGLU12, Description = Beta-glucosidase 12, PFAM = PF00232)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf02123_1022744-1026801' '(gnl|cdd|35845 : 361.0) no description available & (at2g44480 : 303.0) beta glucosidase 17 (BGLU17); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: stem, hypocotyl, sepal, male gametophyte, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 15 (TAIR:AT2G44450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q00326|myro_brana : 241.0) Myrosinase precursor (EC 3.2.1.147) (Sinigrinase) (Thioglucosidase) - Brassica napus (Rape) & (gnl|cdd|84629 : 235.0) no description available & (reliability: 606.0) & (original description: Putative AH1, Description = Glycoside hydrolase family 1 protein, PFAM = PF00232)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf02401_265259-273693' '(at3g18080 : 753.0) B-S glucosidase 44 (BGLU44); FUNCTIONS IN: in 6 functions; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cytosolic ribosome, cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 43 (TAIR:AT3G18070.1); Has 11220 Blast hits to 10898 proteins in 1459 species: Archae - 142; Bacteria - 7700; Metazoa - 714; Fungi - 202; Plants - 1462; Viruses - 0; Other Eukaryotes - 1000 (source: NCBI BLink). & (gnl|cdd|35845 : 655.0) no description available & (gnl|cdd|84629 : 495.0) no description available & (p49235|bglc_maize : 379.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1506.0) & (original description: Putative BGLU43, Description = Beta-glucosidase 43, PFAM = PF00232)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf03010_590304-602990' '(gnl|cdd|35845 : 652.0) no description available & (at4g21760 : 589.0) beta-glucosidase 47 (BGLU47); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-glucosidase 45 (TAIR:AT1G61810.1); Has 11354 Blast hits to 11023 proteins in 1477 species: Archae - 142; Bacteria - 7853; Metazoa - 716; Fungi - 199; Plants - 1433; Viruses - 0; Other Eukaryotes - 1011 (source: NCBI BLink). & (gnl|cdd|84629 : 490.0) no description available & (p49235|bglc_maize : 383.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1178.0) & (original description: Putative BGLU47, Description = Beta-glucosidase 47, PFAM = PF00232)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf03045_167542-177011' '(gnl|cdd|35845 : 623.0) no description available & (at1g61820 : 570.0) beta glucosidase 46 (BGLU46); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lignin biosynthetic process; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-glucosidase 45 (TAIR:AT1G61810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84629 : 469.0) no description available & (q00326|myro_brana : 348.0) Myrosinase precursor (EC 3.2.1.147) (Sinigrinase) (Thioglucosidase) - Brassica napus (Rape) & (reliability: 1140.0) & (original description: Putative BGLU18, Description = Beta-glucosidase 18, PFAM = PF00232)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf03321_485897-537492' '(at3g54440 : 1568.0) glycoside hydrolase family 2 protein; FUNCTIONS IN: carbohydrate binding, cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: male gametophyte, guard cell; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (InterPro:IPR006102), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 42, domain 5 (InterPro:IPR004199), Glycoside hydrolase family 2, TIM barrel (InterPro:IPR006103), Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Glycoside hydrolase, family 2 (InterPro:IPR006101), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Galactose-binding domain-like (InterPro:IPR008979), Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain (InterPro:IPR013812), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781). & (gnl|cdd|83064 : 911.0) no description available & (reliability: 3136.0) & (original description: Putative At3g54440, Description = Glycoside hydrolase family 2 protein, PFAM = PF02929;PF02837;PF16353;PF00703;PF02836)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf03840_45803-51854' '(at3g06510 : 402.0) Encodes a protein with beta-glucosidase activity, mutants show increased sensitivity to freezing; SENSITIVE TO FREEZING 2 (SFR2); FUNCTIONS IN: beta-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to freezing; LOCATED IN: chloroplast outer membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 27 (TAIR:AT3G60120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35845 : 155.0) no description available & (gnl|cdd|32615 : 128.0) no description available & (reliability: 804.0) & (original description: Putative SFR, Description = Putative beta-glycosidase, PFAM = PF00232)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf04071_552915-568969' '(gnl|cdd|35845 : 673.0) no description available & (at2g44480 : 548.0) beta glucosidase 17 (BGLU17); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: stem, hypocotyl, sepal, male gametophyte, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 15 (TAIR:AT2G44450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84629 : 496.0) no description available & (p49235|bglc_maize : 447.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1096.0) & (original description: Putative AH1, Description = Glycoside hydrolase family 1 protein, PFAM = PF00232)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf04992_347354-353452' '(at2g20680 : 662.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT4G28320.1); Has 827 Blast hits to 815 proteins in 205 species: Archae - 18; Bacteria - 244; Metazoa - 38; Fungi - 187; Plants - 310; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|33716 : 115.0) no description available & (reliability: 1324.0) & (original description: Putative MAN2, Description = Mannan endo-1,4-beta-mannosidase 2, PFAM = PF00150)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf05413_177455-183013' '(at5g54570 : 746.0) beta glucosidase 41 (BGLU41); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 40 (TAIR:AT1G26560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35845 : 678.0) no description available & (gnl|cdd|84629 : 503.0) no description available & (p49235|bglc_maize : 394.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1492.0) & (original description: Putative BGLU41, Description = Putative beta-glucosidase 41, PFAM = PF00232)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf05588_640668-647428' '(at5g20950 : 989.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 254.0) no description available & (reliability: 1794.0) & (original description: Putative BGL, Description = Beta-glucosidase, PFAM = PF00933;PF01915)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf05588_826642-833218' '(at5g20950 : 951.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 246.0) no description available & (reliability: 1750.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF01915;PF00933)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf05601_94253-103450' '(gnl|cdd|35845 : 599.0) no description available & (at4g21760 : 580.0) beta-glucosidase 47 (BGLU47); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-glucosidase 45 (TAIR:AT1G61810.1); Has 11354 Blast hits to 11023 proteins in 1477 species: Archae - 142; Bacteria - 7853; Metazoa - 716; Fungi - 199; Plants - 1433; Viruses - 0; Other Eukaryotes - 1011 (source: NCBI BLink). & (gnl|cdd|84629 : 459.0) no description available & (q00326|myro_brana : 337.0) Myrosinase precursor (EC 3.2.1.147) (Sinigrinase) (Thioglucosidase) - Brassica napus (Rape) & (reliability: 1160.0) & (original description: Putative Sb06g022490, Description = Putative uncharacterized protein Sb06g022490, PFAM = PF00232)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf05621_34280-77701' '(at1g67490 : 1072.0) Encodes an alpha-glucosidase I enzyme that catalyzes the first step in N-linked glycan processing. Localized to the endoplasmic reticulum (ER).; glucosidase 1 (GCS1); FUNCTIONS IN: alpha-glucosidase activity; INVOLVED IN: root epidermal cell differentiation, epidermal cell differentiation; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 63 (InterPro:IPR004888), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Six-hairpin glycosidases superfamily protein (TAIR:AT1G24320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86272 : 845.0) no description available & (gnl|cdd|37372 : 763.0) no description available & (reliability: 2144.0) & (original description: Putative GCS1, Description = Mannosyl-oligosaccharide glucosidase GCS1, PFAM = PF03200;PF16923)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf06775_69948-79469' '(at5g20950 : 902.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 253.0) no description available & (reliability: 1774.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF00933;PF01915)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf07304_129990-134830' '(at5g20870 : 600.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 2792 Blast hits to 2718 proteins in 160 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 51; Plants - 2724; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 234.0) no description available & (q03773|e13a_soybn : 206.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Glycine max (Soybean) & (reliability: 1200.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF00332;PF07983)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf09127_4968-18317' '(q5h7p5|ebm_lillo : 1461.0) Mannosylglycoprotein endo-beta-mannosidase (EC 3.2.1.152) (Endo-beta-mannosidase) [Contains: Mannosylglycoprotein endo-beta-mannosidase 31 kDa subunit; Mannosylglycoprotein endo-beta-mannosidase 28 kDa subunit; Mannosylglycoprotein endo- & (at1g09010 : 1400.0) glycoside hydrolase family 2 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (InterPro:IPR006102), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase family 2, TIM barrel (InterPro:IPR006103), Glycoside hydrolase, family 2 (InterPro:IPR006101), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Galactose-binding domain-like (InterPro:IPR008979), Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain (InterPro:IPR013812), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 5072 Blast hits to 5044 proteins in 1162 species: Archae - 18; Bacteria - 3983; Metazoa - 234; Fungi - 319; Plants - 43; Viruses - 2; Other Eukaryotes - 473 (source: NCBI BLink). & (gnl|cdd|33061 : 158.0) no description available & (gnl|cdd|37441 : 140.0) no description available & (reliability: 2800.0) & (original description: Putative EBM, Description = Mannosylglycoprotein endo-beta-mannosidase, PFAM = PF02836;PF00703)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf09698_79828-91472' '(at5g20950 : 887.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 253.0) no description available & (reliability: 1758.0) & (original description: Putative BG, Description = Endo-alpha-1,4-glucanase, PFAM = PF01915;PF00933)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf11389_214142-221934' '(at1g26560 : 777.0) beta glucosidase 40 (BGLU40); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 41 (TAIR:AT5G54570.1); Has 11482 Blast hits to 11079 proteins in 1478 species: Archae - 142; Bacteria - 7937; Metazoa - 716; Fungi - 201; Plants - 1474; Viruses - 0; Other Eukaryotes - 1012 (source: NCBI BLink). & (gnl|cdd|35845 : 718.0) no description available & (gnl|cdd|84629 : 514.0) no description available & (q00326|myro_brana : 424.0) Myrosinase precursor (EC 3.2.1.147) (Sinigrinase) (Thioglucosidase) - Brassica napus (Rape) & (reliability: 1554.0) & (original description: Putative BGLU40, Description = Beta-glucosidase 40, PFAM = PF00232)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf12422_74921-82892' '(at1g27520 : 858.0) Glycosyl hydrolase family 47 protein; FUNCTIONS IN: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity, alpha-mannosidase activity, calcium ion binding; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 47 (InterPro:IPR001382); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 47 protein (TAIR:AT5G43710.1); Has 2179 Blast hits to 1853 proteins in 199 species: Archae - 0; Bacteria - 11; Metazoa - 788; Fungi - 990; Plants - 198; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (gnl|cdd|37640 : 667.0) no description available & (gnl|cdd|85516 : 409.0) no description available & (reliability: 1716.0) & (original description: Putative MNS5, Description = Alpha-mannosidase I MNS5, PFAM = PF01532)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf12422_76328-78098' '(at1g27520 : 122.0) Glycosyl hydrolase family 47 protein; FUNCTIONS IN: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity, alpha-mannosidase activity, calcium ion binding; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 47 (InterPro:IPR001382); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 47 protein (TAIR:AT5G43710.1); Has 2179 Blast hits to 1853 proteins in 199 species: Archae - 0; Bacteria - 11; Metazoa - 788; Fungi - 990; Plants - 198; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (gnl|cdd|37640 : 109.0) no description available & (gnl|cdd|85516 : 87.6) no description available & (reliability: 244.0) & (original description: Putative MNS5, Description = alpha-1,2-Mannosidase, PFAM = PF01532)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf13289_312750-319422' '(at5g20950 : 961.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31661 : 261.0) no description available & (reliability: 1740.0) & (original description: Putative exg1, Description = Lysosomal beta glucosidase, PFAM = PF00933;PF01915)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf18152_53104-60027' '(gnl|cdd|35845 : 619.0) no description available & (at1g61820 : 573.0) beta glucosidase 46 (BGLU46); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lignin biosynthetic process; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-glucosidase 45 (TAIR:AT1G61810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84629 : 475.0) no description available & (p49235|bglc_maize : 373.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1146.0) & (original description: Putative Sb06g022500, Description = Putative uncharacterized protein Sb06g022500, PFAM = PF00232)' T '26.3' 'misc.gluco-, galacto- and mannosidases' 'niben101scf21459_165668-171437' '(gnl|cdd|35845 : 608.0) no description available & (at1g02850 : 605.0) beta glucosidase 11 (BGLU11); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 10 (TAIR:AT4G27830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84629 : 427.0) no description available & (p29092|myr3_sinal : 352.0) Myrosinase MB3 precursor (EC 3.2.1.147) (Sinigrinase) (Thioglucosidase) - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 1210.0) & (original description: Putative BGLU2, Description = Beta-glucosidase 2, PFAM = PF00232)' T '26.3.1' 'misc.gluco-, galacto- and mannosidases.alpha-galactosidase' 'nbv0.3scaffold44372_5710-17440' '(at5g63840 : 1385.0) radial swelling mutant shown to be specifically impaired in cellulose production. Encodes the alpha-subunit of a glucosidase II enzyme.; RADIAL SWELLING 3 (RSW3); FUNCTIONS IN: glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to cadmium ion, cellulose biosynthetic process, defense response to bacterium, unidimensional cell growth; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322); BEST Arabidopsis thaliana protein match is: heteroglycan glucosidase 1 (TAIR:AT3G23640.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36284 : 1177.0) no description available & (gnl|cdd|85212 : 550.0) no description available & (q653v7|aglu_orysa : 311.0) Probable alpha-glucosidase Os06g0675700 precursor (EC 3.2.1.20) (Maltase) - Oryza sativa (Rice) & (reliability: 2770.0) & (original description: Putative PSL5, Description = Probable glucan 1,3-alpha-glucosidase, PFAM = PF01055;PF13802)' T '26.3.1' 'misc.gluco-, galacto- and mannosidases.alpha-galactosidase' 'niben044scf00016012ctg002_1974-4135' '(o04893|aglu_spiol : 342.0) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase) - Spinacia oleracea (Spinach) & (at5g11720 : 326.0) Glycosyl hydrolases family 31 protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: apoplast, vacuole, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-xylosidase 1 (TAIR:AT1G68560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36283 : 210.0) no description available & (gnl|cdd|85212 : 196.0) no description available & (reliability: 652.0) & (original description: Putative gaa, Description = Alpha-glucosidase, PFAM = PF01055)' T '26.3.1' 'misc.gluco-, galacto- and mannosidases.alpha-galactosidase' 'niben044scf00056997ctg001_105-3897' '(at1g68560 : 415.0) Encodes a bifunctional alpha-l-arabinofuranosidase/beta-d-xylosidase that belongs to family 3 of glycoside hydrolases.; alpha-xylosidase 1 (XYL1); FUNCTIONS IN: xyloglucan 1,6-alpha-xylosidase activity, xylan 1,4-beta-xylosidase activity, alpha-N-arabinofuranosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to cadmium ion, xylan catabolic process, xyloglucan metabolic process; LOCATED IN: apoplast, cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 31 protein (TAIR:AT3G45940.1); Has 6339 Blast hits to 5059 proteins in 1114 species: Archae - 86; Bacteria - 4145; Metazoa - 817; Fungi - 695; Plants - 269; Viruses - 0; Other Eukaryotes - 327 (source: NCBI BLink). & (gnl|cdd|36283 : 247.0) no description available & (q653v7|aglu_orysa : 237.0) Probable alpha-glucosidase Os06g0675700 precursor (EC 3.2.1.20) (Maltase) - Oryza sativa (Rice) & (reliability: 830.0) & (original description: Putative agdC, Description = Alpha-glucosidase, PFAM = PF01055;PF16863;PF13802)' T '26.3.1' 'misc.gluco-, galacto- and mannosidases.alpha-galactosidase' 'niben101scf00239_520365-555771' '(at3g23640 : 1533.0) heteroglycan glucosidase 1 (HGL1); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 31 protein (TAIR:AT5G63840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85212 : 487.0) no description available & (gnl|cdd|36284 : 420.0) no description available & (q653v7|aglu_orysa : 307.0) Probable alpha-glucosidase Os06g0675700 precursor (EC 3.2.1.20) (Maltase) - Oryza sativa (Rice) & (reliability: 3066.0) & (original description: Putative BnaCnng35950D, Description = BnaCnng35950D protein, PFAM = PF17137;PF01055;PF13802)' T '26.3.1' 'misc.gluco-, galacto- and mannosidases.alpha-galactosidase' 'niben101scf00753_12778-22764' '(at1g68560 : 1444.0) Encodes a bifunctional alpha-l-arabinofuranosidase/beta-d-xylosidase that belongs to family 3 of glycoside hydrolases.; alpha-xylosidase 1 (XYL1); FUNCTIONS IN: xyloglucan 1,6-alpha-xylosidase activity, xylan 1,4-beta-xylosidase activity, alpha-N-arabinofuranosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to cadmium ion, xylan catabolic process, xyloglucan metabolic process; LOCATED IN: apoplast, cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 31 protein (TAIR:AT3G45940.1); Has 6339 Blast hits to 5059 proteins in 1114 species: Archae - 86; Bacteria - 4145; Metazoa - 817; Fungi - 695; Plants - 269; Viruses - 0; Other Eukaryotes - 327 (source: NCBI BLink). & (q653v7|aglu_orysa : 818.0) Probable alpha-glucosidase Os06g0675700 precursor (EC 3.2.1.20) (Maltase) - Oryza sativa (Rice) & (gnl|cdd|36283 : 813.0) no description available & (gnl|cdd|85212 : 548.0) no description available & (reliability: 2888.0) & (original description: Putative mal2, Description = Alpha-glucosidase, PFAM = PF01055;PF16863;PF13802)' T '26.3.1' 'misc.gluco-, galacto- and mannosidases.alpha-galactosidase' 'niben101scf02243_670356-675968' '(gnl|cdd|77801 : 652.0) no description available & (gnl|cdd|36283 : 124.0) no description available & (at3g45940 : 86.7) Glycosyl hydrolases family 31 protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, sepal, pedicel, flower; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-xylosidase 1 (TAIR:AT1G68560.1); Has 5440 Blast hits to 5077 proteins in 1113 species: Archae - 86; Bacteria - 3115; Metazoa - 813; Fungi - 823; Plants - 272; Viruses - 2; Other Eukaryotes - 329 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative Os01g0268600, Description = Alpha-glucosidase-like, PFAM = PF01055)' T '26.3.1' 'misc.gluco-, galacto- and mannosidases.alpha-galactosidase' 'niben101scf03565_806124-814735' '(at5g63840 : 632.0) radial swelling mutant shown to be specifically impaired in cellulose production. Encodes the alpha-subunit of a glucosidase II enzyme.; RADIAL SWELLING 3 (RSW3); FUNCTIONS IN: glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to cadmium ion, cellulose biosynthetic process, defense response to bacterium, unidimensional cell growth; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322); BEST Arabidopsis thaliana protein match is: heteroglycan glucosidase 1 (TAIR:AT3G23640.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36284 : 554.0) no description available & (gnl|cdd|85212 : 335.0) no description available & (q653v7|aglu_orysa : 210.0) Probable alpha-glucosidase Os06g0675700 precursor (EC 3.2.1.20) (Maltase) - Oryza sativa (Rice) & (reliability: 1264.0) & (original description: Putative zgc:171967, Description = Zgc:171967 protein, PFAM = PF01055)' T '26.3.1' 'misc.gluco-, galacto- and mannosidases.alpha-galactosidase' 'niben101scf04487_200710-214884' '(at5g63840 : 1411.0) radial swelling mutant shown to be specifically impaired in cellulose production. Encodes the alpha-subunit of a glucosidase II enzyme.; RADIAL SWELLING 3 (RSW3); FUNCTIONS IN: glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to cadmium ion, cellulose biosynthetic process, defense response to bacterium, unidimensional cell growth; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322); BEST Arabidopsis thaliana protein match is: heteroglycan glucosidase 1 (TAIR:AT3G23640.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36284 : 1184.0) no description available & (gnl|cdd|85212 : 552.0) no description available & (q653v7|aglu_orysa : 310.0) Probable alpha-glucosidase Os06g0675700 precursor (EC 3.2.1.20) (Maltase) - Oryza sativa (Rice) & (reliability: 2822.0) & (original description: Putative PSL5, Description = Probable glucan 1,3-alpha-glucosidase, PFAM = PF01055;PF13802)' T '26.3.1' 'misc.gluco-, galacto- and mannosidases.alpha-galactosidase' 'niben101scf04998_227611-237493' '(at1g68560 : 1435.0) Encodes a bifunctional alpha-l-arabinofuranosidase/beta-d-xylosidase that belongs to family 3 of glycoside hydrolases.; alpha-xylosidase 1 (XYL1); FUNCTIONS IN: xyloglucan 1,6-alpha-xylosidase activity, xylan 1,4-beta-xylosidase activity, alpha-N-arabinofuranosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to cadmium ion, xylan catabolic process, xyloglucan metabolic process; LOCATED IN: apoplast, cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 31 protein (TAIR:AT3G45940.1); Has 6339 Blast hits to 5059 proteins in 1114 species: Archae - 86; Bacteria - 4145; Metazoa - 817; Fungi - 695; Plants - 269; Viruses - 0; Other Eukaryotes - 327 (source: NCBI BLink). & (o04893|aglu_spiol : 823.0) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase) - Spinacia oleracea (Spinach) & (gnl|cdd|36283 : 810.0) no description available & (gnl|cdd|85212 : 560.0) no description available & (reliability: 2870.0) & (original description: Putative mal2, Description = Alpha-glucosidase, PFAM = PF16863;PF01055)' T '26.3.1' 'misc.gluco-, galacto- and mannosidases.alpha-galactosidase' 'niben101scf26939_51349-58289' '(at5g11720 : 1162.0) Glycosyl hydrolases family 31 protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: apoplast, vacuole, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-xylosidase 1 (TAIR:AT1G68560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o04893|aglu_spiol : 1130.0) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase) - Spinacia oleracea (Spinach) & (gnl|cdd|36283 : 786.0) no description available & (gnl|cdd|85212 : 585.0) no description available & (reliability: 2324.0) & (original description: Putative agdA, Description = Alpha-glucosidase, PFAM = PF16863;PF01055;PF13802)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'nbv0.3scaffold31079_3060-11616' '(p48981|bgal_maldo : 1108.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) - Malus domestica (Apple) (Malus sylvestris) & (at3g13750 : 1076.0) beta-galactosidase, glycosyl hydrolase family 35; beta galactosidase 1 (BGAL1); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2213 Blast hits to 2119 proteins in 468 species: Archae - 15; Bacteria - 882; Metazoa - 391; Fungi - 211; Plants - 629; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|35717 : 828.0) no description available & (gnl|cdd|85374 : 432.0) no description available & (reliability: 2152.0) & (original description: Putative bGal, Description = Beta-galactosidase, PFAM = PF01301)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'nbv0.3scaffold63813_1713-9438' '(at2g28470 : 1225.0) putative beta-galactosidase (BGAL8 gene); beta-galactosidase 8 (BGAL8); FUNCTIONS IN: cation binding, sugar binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta galactosidase 1 (TAIR:AT3G13750.1). & (p45582|bgal_aspof : 939.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 781.0) no description available & (gnl|cdd|85374 : 450.0) no description available & (reliability: 2450.0) & (original description: Putative BGAL8, Description = Beta-galactosidase 8, PFAM = PF02140;PF01301)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'nbv0.5scaffold235_75413-97481' '(at2g28470 : 974.0) putative beta-galactosidase (BGAL8 gene); beta-galactosidase 8 (BGAL8); FUNCTIONS IN: cation binding, sugar binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta galactosidase 1 (TAIR:AT3G13750.1). & (p45582|bgal_aspof : 861.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 700.0) no description available & (gnl|cdd|85374 : 418.0) no description available & (reliability: 1948.0) & (original description: Putative bGal, Description = Beta-galactosidase, PFAM = PF01301;PF02140)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'nbv0.5scaffold573_111591-151875' '(at1g77410 : 969.0) beta-galactosidase 16 (BGAL16); FUNCTIONS IN: cation binding, sugar binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 35 protein (TAIR:AT5G63800.1); Has 2516 Blast hits to 2225 proteins in 479 species: Archae - 17; Bacteria - 1086; Metazoa - 478; Fungi - 225; Plants - 619; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|35717 : 744.0) no description available & (p45582|bgal_aspof : 696.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|85374 : 410.0) no description available & (reliability: 1938.0) & (original description: Putative BGAL16, Description = Beta-galactosidase 16, PFAM = PF13364;PF01301)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'nbv0.5scaffold738_113210-129979' '(at5g63810 : 1079.0) member of Glycoside Hydrolase Family 35; beta-galactosidase 10 (BGAL10); FUNCTIONS IN: cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to karrikin; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 8 (TAIR:AT2G28470.1); Has 2086 Blast hits to 2065 proteins in 466 species: Archae - 15; Bacteria - 851; Metazoa - 358; Fungi - 207; Plants - 597; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (p45582|bgal_aspof : 887.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 737.0) no description available & (gnl|cdd|85374 : 426.0) no description available & (reliability: 2158.0) & (original description: Putative bGal, Description = Beta-galactosidase, PFAM = PF02140;PF01301)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'nbv0.5scaffold8744_4795-26494' '(at2g32810 : 1229.0) putative beta-galactosidase; beta galactosidase 9 (BGAL9); FUNCTIONS IN: cation binding, sugar binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 8 (TAIR:AT2G28470.1). & (p45582|bgal_aspof : 770.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 650.0) no description available & (gnl|cdd|85374 : 378.0) no description available & (reliability: 2458.0) & (original description: Putative bGal, Description = Beta-galactosidase, PFAM = PF02140;PF01301)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben044scf00010494ctg011_1-2599' '(p45582|bgal_aspof : 357.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (at3g13750 : 350.0) beta-galactosidase, glycosyl hydrolase family 35; beta galactosidase 1 (BGAL1); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2213 Blast hits to 2119 proteins in 468 species: Archae - 15; Bacteria - 882; Metazoa - 391; Fungi - 211; Plants - 629; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|35717 : 167.0) no description available & (gnl|cdd|85885 : 117.0) no description available & (reliability: 700.0) & (original description: Putative GAL5, Description = Beta-galactosidase, PFAM = PF02140)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben044scf00012766ctg000_1436-9139' '(at4g36360 : 1439.0) putative beta-galactosidase (BGAL3 gene); beta-galactosidase 3 (BGAL3); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta galactosidase 1 (TAIR:AT3G13750.1); Has 2405 Blast hits to 2192 proteins in 479 species: Archae - 15; Bacteria - 1021; Metazoa - 436; Fungi - 211; Plants - 628; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (p45582|bgal_aspof : 1112.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 836.0) no description available & (gnl|cdd|85374 : 444.0) no description available & (reliability: 2878.0) & (original description: Putative BGAL3, Description = Beta-galactosidase 3, PFAM = PF02140;PF01301)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf00422_194493-206257' '(p48981|bgal_maldo : 1095.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) - Malus domestica (Apple) (Malus sylvestris) & (at3g13750 : 1065.0) beta-galactosidase, glycosyl hydrolase family 35; beta galactosidase 1 (BGAL1); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2213 Blast hits to 2119 proteins in 468 species: Archae - 15; Bacteria - 882; Metazoa - 391; Fungi - 211; Plants - 629; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|35717 : 828.0) no description available & (gnl|cdd|85374 : 435.0) no description available & (reliability: 2130.0) & (original description: Putative bGal, Description = Beta-galactosidase, PFAM = PF01301)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf01304_160834-169020' '(at3g13750 : 1386.0) beta-galactosidase, glycosyl hydrolase family 35; beta galactosidase 1 (BGAL1); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2213 Blast hits to 2119 proteins in 468 species: Archae - 15; Bacteria - 882; Metazoa - 391; Fungi - 211; Plants - 629; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (p45582|bgal_aspof : 1266.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 866.0) no description available & (gnl|cdd|85374 : 440.0) no description available & (reliability: 2772.0) & (original description: Putative bGal, Description = Beta-galactosidase, PFAM = PF02140;PF01301)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf01505_294543-323513' '(at1g72990 : 892.0) beta-galactosidase 17 (BGAL17); FUNCTIONS IN: cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35717 : 521.0) no description available & (gnl|cdd|85374 : 406.0) no description available & (p48981|bgal_maldo : 171.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 1784.0) & (original description: Putative BGAL17, Description = Beta-galactosidase 17, PFAM = PF01301;PF13364)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf01563_431537-442850' '(at1g31740 : 86.7) Encodes a putative β-galactosidase.; beta-galactosidase 15 (BGAL15); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Galactose-binding domain-like (InterPro:IPR008979), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-galactosidase 7 (TAIR:AT5G20710.1); Has 2176 Blast hits to 2100 proteins in 470 species: Archae - 15; Bacteria - 883; Metazoa - 370; Fungi - 212; Plants - 619; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|35717 : 81.1) no description available & (reliability: 173.4) & (original description: Putative teg1A, Description = Beta-galactosidase, PFAM = PF01301)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf01888_1003461-1018215' '(at1g77410 : 919.0) beta-galactosidase 16 (BGAL16); FUNCTIONS IN: cation binding, sugar binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 35 protein (TAIR:AT5G63800.1); Has 2516 Blast hits to 2225 proteins in 479 species: Archae - 17; Bacteria - 1086; Metazoa - 478; Fungi - 225; Plants - 619; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|35717 : 733.0) no description available & (p45582|bgal_aspof : 672.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|85374 : 403.0) no description available & (reliability: 1838.0) & (original description: Putative BGAL16, Description = Beta-galactosidase 16, PFAM = PF13364;PF01301)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf01888_1019728-1023303' '(at1g77410 : 243.0) beta-galactosidase 16 (BGAL16); FUNCTIONS IN: cation binding, sugar binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 35 protein (TAIR:AT5G63800.1); Has 2516 Blast hits to 2225 proteins in 479 species: Archae - 17; Bacteria - 1086; Metazoa - 478; Fungi - 225; Plants - 619; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|35717 : 178.0) no description available & (p48981|bgal_maldo : 151.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 486.0) & (original description: Putative gal, Description = Beta-galactosidase, PFAM = PF13364)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf02025_351904-359497' '(at2g16730 : 1001.0) putative beta-galactosidase (BGAL13 gene); glycosyl hydrolase family 35 protein; FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 11 (TAIR:AT4G35010.1); Has 2592 Blast hits to 2188 proteins in 502 species: Archae - 15; Bacteria - 1202; Metazoa - 413; Fungi - 220; Plants - 636; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|35717 : 744.0) no description available & (p45582|bgal_aspof : 661.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|85374 : 416.0) no description available & (reliability: 2002.0) & (original description: Putative BGAL13, Description = Beta-galactosidase 13, PFAM = PF01301;PF02140)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf02236_12255-19286' '(at3g13750 : 1209.0) beta-galactosidase, glycosyl hydrolase family 35; beta galactosidase 1 (BGAL1); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2213 Blast hits to 2119 proteins in 468 species: Archae - 15; Bacteria - 882; Metazoa - 391; Fungi - 211; Plants - 629; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (p45582|bgal_aspof : 1196.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 821.0) no description available & (gnl|cdd|85374 : 435.0) no description available & (reliability: 2418.0) & (original description: Putative bGal, Description = Beta-galactosidase, PFAM = PF01301;PF02140)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf02363_65581-73033' '(at3g13750 : 1362.0) beta-galactosidase, glycosyl hydrolase family 35; beta galactosidase 1 (BGAL1); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2213 Blast hits to 2119 proteins in 468 species: Archae - 15; Bacteria - 882; Metazoa - 391; Fungi - 211; Plants - 629; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (p45582|bgal_aspof : 1254.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 865.0) no description available & (gnl|cdd|85374 : 436.0) no description available & (reliability: 2724.0) & (original description: Putative bGal, Description = Beta-galactosidase, PFAM = PF02140;PF01301)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf02621_303841-313957' '(at2g16730 : 975.0) putative beta-galactosidase (BGAL13 gene); glycosyl hydrolase family 35 protein; FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 11 (TAIR:AT4G35010.1); Has 2592 Blast hits to 2188 proteins in 502 species: Archae - 15; Bacteria - 1202; Metazoa - 413; Fungi - 220; Plants - 636; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|35717 : 724.0) no description available & (p45582|bgal_aspof : 649.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|85374 : 410.0) no description available & (reliability: 1950.0) & (original description: Putative bGal, Description = Beta-galactosidase, PFAM = PF01301;PF02140)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf02658_305971-313840' '(at2g16730 : 943.0) putative beta-galactosidase (BGAL13 gene); glycosyl hydrolase family 35 protein; FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 11 (TAIR:AT4G35010.1); Has 2592 Blast hits to 2188 proteins in 502 species: Archae - 15; Bacteria - 1202; Metazoa - 413; Fungi - 220; Plants - 636; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|35717 : 727.0) no description available & (p45582|bgal_aspof : 620.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|85374 : 413.0) no description available & (reliability: 1886.0) & (original description: Putative BGAL13, Description = Beta-galactosidase 13, PFAM = PF02140;PF01301;PF13364)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf05272_326627-335380' '(at3g13750 : 1361.0) beta-galactosidase, glycosyl hydrolase family 35; beta galactosidase 1 (BGAL1); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2213 Blast hits to 2119 proteins in 468 species: Archae - 15; Bacteria - 882; Metazoa - 391; Fungi - 211; Plants - 629; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (p45582|bgal_aspof : 1250.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 854.0) no description available & (gnl|cdd|85374 : 432.0) no description available & (reliability: 2722.0) & (original description: Putative bGal, Description = Beta-galactosidase, PFAM = PF01301;PF02140)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf05713_30234-47400' '(at2g32810 : 1295.0) putative beta-galactosidase; beta galactosidase 9 (BGAL9); FUNCTIONS IN: cation binding, sugar binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 8 (TAIR:AT2G28470.1). & (p45582|bgal_aspof : 837.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 722.0) no description available & (gnl|cdd|85374 : 408.0) no description available & (reliability: 2590.0) & (original description: Putative BGAL9, Description = Beta-galactosidase 9, PFAM = PF01301;PF02140;PF02140)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf05764_516484-524446' '(at4g36360 : 1436.0) putative beta-galactosidase (BGAL3 gene); beta-galactosidase 3 (BGAL3); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta galactosidase 1 (TAIR:AT3G13750.1); Has 2405 Blast hits to 2192 proteins in 479 species: Archae - 15; Bacteria - 1021; Metazoa - 436; Fungi - 211; Plants - 628; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (p45582|bgal_aspof : 1108.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 838.0) no description available & (gnl|cdd|85374 : 443.0) no description available & (reliability: 2872.0) & (original description: Putative BGAL3, Description = Beta-galactosidase 3, PFAM = PF02140;PF01301)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf06106_185554-193646' '(at2g16730 : 941.0) putative beta-galactosidase (BGAL13 gene); glycosyl hydrolase family 35 protein; FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 11 (TAIR:AT4G35010.1); Has 2592 Blast hits to 2188 proteins in 502 species: Archae - 15; Bacteria - 1202; Metazoa - 413; Fungi - 220; Plants - 636; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|35717 : 728.0) no description available & (p45582|bgal_aspof : 620.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|85374 : 416.0) no description available & (reliability: 1882.0) & (original description: Putative BGAL13, Description = Beta-galactosidase 13, PFAM = PF01301;PF02140;PF13364)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf07027_397990-400622' '(p45582|bgal_aspof : 100.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (at1g45130 : 99.4) beta-galactosidase 5 (BGAL5); FUNCTIONS IN: cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Glycoside hydrolase, family 35 (InterPro:IPR001944), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2206 Blast hits to 2062 proteins in 469 species: Archae - 15; Bacteria - 946; Metazoa - 364; Fungi - 218; Plants - 593; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|35717 : 93.8) no description available & (gnl|cdd|85374 : 81.0) no description available & (reliability: 198.8) & (original description: Putative teg1A, Description = Beta-galactosidase, PFAM = PF01301)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf08651_434984-443417' '(at5g20710 : 1134.0) beta-galactosidase 7 (BGAL7); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 15 (TAIR:AT1G31740.1); Has 2182 Blast hits to 2117 proteins in 479 species: Archae - 16; Bacteria - 866; Metazoa - 388; Fungi - 212; Plants - 616; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (p49676|bgal_braol : 1130.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Brassica oleracea (Wild cabbage) & (gnl|cdd|35717 : 693.0) no description available & (gnl|cdd|85374 : 427.0) no description available & (reliability: 2268.0) & (original description: Putative BGAL15, Description = Beta-galactosidase 15, PFAM = PF01301;PF02140)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf10213_53088-60484' '(at3g13750 : 1360.0) beta-galactosidase, glycosyl hydrolase family 35; beta galactosidase 1 (BGAL1); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2213 Blast hits to 2119 proteins in 468 species: Archae - 15; Bacteria - 882; Metazoa - 391; Fungi - 211; Plants - 629; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (p45582|bgal_aspof : 1252.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 862.0) no description available & (gnl|cdd|85374 : 434.0) no description available & (reliability: 2720.0) & (original description: Putative BGAL12, Description = Beta-galactosidase 12, PFAM = PF02140;PF01301)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf10490_82038-88897' '(at4g36360 : 1133.0) putative beta-galactosidase (BGAL3 gene); beta-galactosidase 3 (BGAL3); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta galactosidase 1 (TAIR:AT3G13750.1); Has 2405 Blast hits to 2192 proteins in 479 species: Archae - 15; Bacteria - 1021; Metazoa - 436; Fungi - 211; Plants - 628; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (p45582|bgal_aspof : 998.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 802.0) no description available & (gnl|cdd|85374 : 445.0) no description available & (reliability: 2266.0) & (original description: Putative BGAL5, Description = Beta-galactosidase 5, PFAM = PF01301)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf10889_256826-273789' '(at4g36360 : 1146.0) putative beta-galactosidase (BGAL3 gene); beta-galactosidase 3 (BGAL3); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta galactosidase 1 (TAIR:AT3G13750.1); Has 2405 Blast hits to 2192 proteins in 479 species: Archae - 15; Bacteria - 1021; Metazoa - 436; Fungi - 211; Plants - 628; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (p45582|bgal_aspof : 989.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (gnl|cdd|35717 : 816.0) no description available & (gnl|cdd|85374 : 448.0) no description available & (reliability: 2292.0) & (original description: Putative BGAL5, Description = Beta-galactosidase 5, PFAM = PF01301)' T '26.3.2' 'misc.gluco-, galacto- and mannosidases.beta-galactosidase' 'niben101scf20935_65304-71552' '(at5g20710 : 861.0) beta-galactosidase 7 (BGAL7); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 15 (TAIR:AT1G31740.1); Has 2182 Blast hits to 2117 proteins in 479 species: Archae - 16; Bacteria - 866; Metazoa - 388; Fungi - 212; Plants - 616; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (p49676|bgal_braol : 850.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Brassica oleracea (Wild cabbage) & (gnl|cdd|35717 : 643.0) no description available & (gnl|cdd|85374 : 404.0) no description available & (reliability: 1722.0) & (original description: Putative BGAL7, Description = Beta-galactosidase 7, PFAM = PF01301)' T '26.3.3' 'misc.gluco-, galacto- and mannosidases.alpha-mannosidase' 'niben101scf00153_138906-154247' '(at5g13980 : 1428.0) Glycosyl hydrolase family 38 protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: mannose metabolic process, carbohydrate metabolic process; LOCATED IN: apoplast, cell wall, plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Glycoside hydrolase/deacetylase, beta/alpha-barrel (InterPro:IPR011330), Glycoside hydrolase, family 38, central domain (InterPro:IPR015341), Glycoside hydrolase, family 38, core (InterPro:IPR000602), Glycosyl hydrolases 38, C-terminal (InterPro:IPR011682); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 38 protein (TAIR:AT3G26720.1); Has 1157 Blast hits to 1109 proteins in 192 species: Archae - 7; Bacteria - 147; Metazoa - 691; Fungi - 22; Plants - 155; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|37170 : 1265.0) no description available & (gnl|cdd|85226 : 274.0) no description available & (reliability: 2856.0) & (original description: Putative At5g13980, Description = Probable alpha-mannosidase At5g13980, PFAM = PF01074;PF09261;PF07748)' T '26.3.3' 'misc.gluco-, galacto- and mannosidases.alpha-mannosidase' 'niben101scf01664_3500-14324' '(at5g66150 : 556.0) Glycosyl hydrolase family 38 protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: mannose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sperm cell, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Glycoside hydrolase/deacetylase, beta/alpha-barrel (InterPro:IPR011330), Glycoside hydrolase, family 38, central domain (InterPro:IPR015341), Glycoside hydrolase, family 38, core (InterPro:IPR000602), Glycosyl hydrolases 38, C-terminal (InterPro:IPR011682); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 38 protein (TAIR:AT5G13980.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37170 : 507.0) no description available & (gnl|cdd|87365 : 186.0) no description available & (reliability: 1112.0) & (original description: Putative MAN, Description = Alpha-mannosidase, PFAM = PF07748;PF07748)' T '26.3.3' 'misc.gluco-, galacto- and mannosidases.alpha-mannosidase' 'niben101scf07250_461254-472879' '(at5g66150 : 1387.0) Glycosyl hydrolase family 38 protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: mannose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sperm cell, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Glycoside hydrolase/deacetylase, beta/alpha-barrel (InterPro:IPR011330), Glycoside hydrolase, family 38, central domain (InterPro:IPR015341), Glycoside hydrolase, family 38, core (InterPro:IPR000602), Glycosyl hydrolases 38, C-terminal (InterPro:IPR011682); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 38 protein (TAIR:AT5G13980.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37170 : 1269.0) no description available & (gnl|cdd|85226 : 274.0) no description available & (reliability: 2774.0) & (original description: Putative MAN, Description = Alpha-mannosidase, PFAM = PF09261;PF07748;PF01074)' T '26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'nbv0.3scaffold7947_5994-13019' '(at1g64390 : 905.0) glycosyl hydrolase 9C2 (GH9C2); FUNCTIONS IN: carbohydrate binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Carbohydrate-binding (InterPro:IPR008965), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701), Carbohydrate binding domain CBM49 (InterPro:IPR019028); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C3 (TAIR:AT4G11050.1); Has 1850 Blast hits to 1830 proteins in 260 species: Archae - 2; Bacteria - 630; Metazoa - 187; Fungi - 17; Plants - 921; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (q6l4i2|gun15_orysa : 744.0) Endoglucanase 15 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 15) - Oryza sativa (Rice) & (gnl|cdd|85009 : 570.0) no description available & (reliability: 1810.0) & (original description: Putative cel8, Description = Endoglucanase, PFAM = PF00759;PF09478)' T '26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'nbv0.3scaffold18061_8993-15066' '(at1g48930 : 769.0) glycosyl hydrolase 9C1 (GH9C1); FUNCTIONS IN: carbohydrate binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701), Carbohydrate binding domain CBM49 (InterPro:IPR019028); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C2 (TAIR:AT1G64390.1); Has 1873 Blast hits to 1853 proteins in 259 species: Archae - 2; Bacteria - 684; Metazoa - 175; Fungi - 17; Plants - 924; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (q259h9|gun13_orysa : 684.0) Endoglucanase 13 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 13) (OsGLU6) - Oryza sativa (Rice) & (gnl|cdd|85009 : 535.0) no description available & (reliability: 1538.0) & (original description: Putative cel8, Description = Endoglucanase, PFAM = PF09478;PF00759)' T '26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'nbv0.3scaffold31157_6369-14168' '(at1g64390 : 915.0) glycosyl hydrolase 9C2 (GH9C2); FUNCTIONS IN: carbohydrate binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Carbohydrate-binding (InterPro:IPR008965), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701), Carbohydrate binding domain CBM49 (InterPro:IPR019028); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C3 (TAIR:AT4G11050.1); Has 1850 Blast hits to 1830 proteins in 260 species: Archae - 2; Bacteria - 630; Metazoa - 187; Fungi - 17; Plants - 921; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (q5nat0|gun2_orysa : 737.0) Endoglucanase 2 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 2) (OsGLU5) - Oryza sativa (Rice) & (gnl|cdd|85009 : 564.0) no description available & (reliability: 1830.0) & (original description: Putative eg4, Description = Endoglucanase, PFAM = PF00759;PF09478)' T '26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'nbv0.3scaffold34244_18668-22499' '(at4g02290 : 773.0) glycosyl hydrolase 9B13 (GH9B13); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: cellulase 2 (TAIR:AT1G02800.1); Has 1736 Blast hits to 1717 proteins in 249 species: Archae - 2; Bacteria - 566; Metazoa - 187; Fungi - 17; Plants - 926; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (q8lq92|gun3_orysa : 711.0) Endoglucanase 3 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 3) (OsGLU8) - Oryza sativa (Rice) & (gnl|cdd|85009 : 603.0) no description available & (reliability: 1546.0) & (original description: Putative cel7, Description = Endoglucanase, PFAM = PF00759)' T '26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben044scf00028575ctg004_31309-35981' '(q7xuk4|gun12_orysa : 375.0) Endoglucanase 12 (EC 3.2.1.4) (Endo-1,4-beta glucanase 12) (OsGLU3) - Oryza sativa (Rice) & (at1g65610 : 360.0) KORRIGAN 2 (KOR2); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, sepal, root, leaf, stamen; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9A1 (TAIR:AT5G49720.1); Has 1630 Blast hits to 1606 proteins in 228 species: Archae - 2; Bacteria - 483; Metazoa - 181; Fungi - 17; Plants - 907; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|85009 : 353.0) no description available & (reliability: 720.0) & (original description: Putative CEL, Description = Endoglucanase, PFAM = PF00759)' T '26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben101scf00148_137200-141433' '(at1g70710 : 530.0) endo-1,4-beta-glucanase. Involved in cell elongation.; glycosyl hydrolase 9B1 (GH9B1); FUNCTIONS IN: cellulase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to cyclopentenone, cell wall modification involved in multidimensional cell growth; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B6 (TAIR:AT1G23210.1); Has 1758 Blast hits to 1741 proteins in 256 species: Archae - 2; Bacteria - 589; Metazoa - 188; Fungi - 19; Plants - 920; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|85009 : 512.0) no description available & (q652f9|gun17_orysa : 510.0) Endoglucanase 17 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 17) (OsGLU13) - Oryza sativa (Rice) & (reliability: 1060.0) & (original description: Putative cel7, Description = Endoglucanase, PFAM = PF00759)' T '26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben101scf01184_1647446-1652520' '(at1g71380 : 662.0) cellulase 3 (CEL3); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plasma membrane, plant-type cell wall; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: cellulase 5 (TAIR:AT1G22880.1); Has 1752 Blast hits to 1741 proteins in 250 species: Archae - 2; Bacteria - 607; Metazoa - 172; Fungi - 17; Plants - 917; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|85009 : 568.0) no description available & (q7xth4|gun11_orysa : 559.0) Endoglucanase 11 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 11) (OsGLU4) - Oryza sativa (Rice) & (reliability: 1324.0) & (original description: Putative cel7, Description = Endoglucanase, PFAM = PF00759)' T '26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben101scf01435_67864-72637' '(q6yxt7|gun19_orysa : 645.0) Endoglucanase 19 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 19) - Oryza sativa (Rice) & (at4g02290 : 611.0) glycosyl hydrolase 9B13 (GH9B13); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: cellulase 2 (TAIR:AT1G02800.1); Has 1736 Blast hits to 1717 proteins in 249 species: Archae - 2; Bacteria - 566; Metazoa - 187; Fungi - 17; Plants - 926; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|85009 : 573.0) no description available & (reliability: 1222.0) & (original description: Putative CEL1, Description = Endoglucanase 1, PFAM = PF00759)' T '26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben101scf01623_181183-187639' '(at4g02290 : 775.0) glycosyl hydrolase 9B13 (GH9B13); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: cellulase 2 (TAIR:AT1G02800.1); Has 1736 Blast hits to 1717 proteins in 249 species: Archae - 2; Bacteria - 566; Metazoa - 187; Fungi - 17; Plants - 926; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (q8lq92|gun3_orysa : 719.0) Endoglucanase 3 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 3) (OsGLU8) - Oryza sativa (Rice) & (gnl|cdd|85009 : 603.0) no description available & (reliability: 1550.0) & (original description: Putative cel7, Description = Endoglucanase, PFAM = PF00759)' T '26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben101scf04567_182737-189043' '(at1g48930 : 786.0) glycosyl hydrolase 9C1 (GH9C1); FUNCTIONS IN: carbohydrate binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701), Carbohydrate binding domain CBM49 (InterPro:IPR019028); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C2 (TAIR:AT1G64390.1); Has 1873 Blast hits to 1853 proteins in 259 species: Archae - 2; Bacteria - 684; Metazoa - 175; Fungi - 17; Plants - 924; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (q259h9|gun13_orysa : 697.0) Endoglucanase 13 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 13) (OsGLU6) - Oryza sativa (Rice) & (gnl|cdd|85009 : 538.0) no description available & (reliability: 1572.0) & (original description: Putative cel8, Description = Endoglucanase, PFAM = PF00759;PF09478)' T '26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben101scf06267_302543-307717' '(q69sg5|gun24_orysa : 627.0) Endoglucanase 24 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 24) - Oryza sativa (Rice) & (at1g19940 : 606.0) glycosyl hydrolase 9B5 (GH9B5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B7 (TAIR:AT1G75680.1); Has 1847 Blast hits to 1835 proteins in 264 species: Archae - 2; Bacteria - 685; Metazoa - 182; Fungi - 17; Plants - 919; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|85009 : 466.0) no description available & (reliability: 1188.0) & (original description: Putative cel8, Description = Endoglucanase, PFAM = PF00759)' T '26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben101scf06529_755097-761876' '(at1g64390 : 925.0) glycosyl hydrolase 9C2 (GH9C2); FUNCTIONS IN: carbohydrate binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Carbohydrate-binding (InterPro:IPR008965), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701), Carbohydrate binding domain CBM49 (InterPro:IPR019028); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C3 (TAIR:AT4G11050.1); Has 1850 Blast hits to 1830 proteins in 260 species: Archae - 2; Bacteria - 630; Metazoa - 187; Fungi - 17; Plants - 921; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (q5nat0|gun2_orysa : 750.0) Endoglucanase 2 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 2) (OsGLU5) - Oryza sativa (Rice) & (gnl|cdd|85009 : 566.0) no description available & (reliability: 1850.0) & (original description: Putative eg4, Description = Endoglucanase, PFAM = PF09478;PF00759)' T '26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben101scf07850_405286-414394' '(at1g70710 : 761.0) endo-1,4-beta-glucanase. Involved in cell elongation.; glycosyl hydrolase 9B1 (GH9B1); FUNCTIONS IN: cellulase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to cyclopentenone, cell wall modification involved in multidimensional cell growth; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B6 (TAIR:AT1G23210.1); Has 1758 Blast hits to 1741 proteins in 256 species: Archae - 2; Bacteria - 589; Metazoa - 188; Fungi - 19; Plants - 920; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (q652f9|gun17_orysa : 708.0) Endoglucanase 17 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 17) (OsGLU13) - Oryza sativa (Rice) & (gnl|cdd|85009 : 554.0) no description available & (reliability: 1522.0) & (original description: Putative eg1, Description = Endoglucanase, PFAM = PF00759)' T '26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben101scf11588_144701-153990' '(at1g64390 : 907.0) glycosyl hydrolase 9C2 (GH9C2); FUNCTIONS IN: carbohydrate binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Carbohydrate-binding (InterPro:IPR008965), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701), Carbohydrate binding domain CBM49 (InterPro:IPR019028); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C3 (TAIR:AT4G11050.1); Has 1850 Blast hits to 1830 proteins in 260 species: Archae - 2; Bacteria - 630; Metazoa - 187; Fungi - 17; Plants - 921; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (q5nat0|gun2_orysa : 737.0) Endoglucanase 2 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 2) (OsGLU5) - Oryza sativa (Rice) & (gnl|cdd|85009 : 566.0) no description available & (reliability: 1814.0) & (original description: Putative eg4, Description = Endoglucanase, PFAM = PF00759;PF09478)' T '26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben101scf11743_67294-74707' '(at1g19940 : 678.0) glycosyl hydrolase 9B5 (GH9B5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B7 (TAIR:AT1G75680.1); Has 1847 Blast hits to 1835 proteins in 264 species: Archae - 2; Bacteria - 685; Metazoa - 182; Fungi - 17; Plants - 919; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (q69sg5|gun24_orysa : 670.0) Endoglucanase 24 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 24) - Oryza sativa (Rice) & (gnl|cdd|85009 : 464.0) no description available & (reliability: 1300.0) & (original description: Putative cel8, Description = Endoglucanase, PFAM = PF00759)' T '26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben101scf12797_21354-27747' '(at2g44550 : 548.0) glycosyl hydrolase 9B10 (GH9B10); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B9 (TAIR:AT2G44540.1); Has 1833 Blast hits to 1821 proteins in 270 species: Archae - 2; Bacteria - 670; Metazoa - 180; Fungi - 19; Plants - 920; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|85009 : 535.0) no description available & (q6l4i2|gun15_orysa : 513.0) Endoglucanase 15 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 15) - Oryza sativa (Rice) & (reliability: 1096.0) & (original description: Putative cel8, Description = Endoglucanase, PFAM = PF00759)' T '26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben101scf13118_178920-183449' '(at4g02290 : 467.0) glycosyl hydrolase 9B13 (GH9B13); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: cellulase 2 (TAIR:AT1G02800.1); Has 1736 Blast hits to 1717 proteins in 249 species: Archae - 2; Bacteria - 566; Metazoa - 187; Fungi - 17; Plants - 926; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (q8lq92|gun3_orysa : 438.0) Endoglucanase 3 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 3) (OsGLU8) - Oryza sativa (Rice) & (gnl|cdd|85009 : 333.0) no description available & (reliability: 934.0) & (original description: Putative Cel4, Description = Endo-beta-1,4-glucanase, PFAM = PF00759)' T '26.3.4' 'misc.gluco-, galacto- and mannosidases.endoglucanase' 'niben101scf21401_25901-33518' '(at4g39010 : 710.0) glycosyl hydrolase 9B18 (GH9B18); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B17 (TAIR:AT4G39000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q69nf5|gun23_orysa : 642.0) Endoglucanase 23 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 23) (OsGLU12) - Oryza sativa (Rice) & (gnl|cdd|85009 : 522.0) no description available & (reliability: 1420.0) & (original description: Putative cel7, Description = Endoglucanase, PFAM = PF00759)' T '26.3.5' 'misc.gluco-, galacto- and mannosidases.glycosyl hydrolase family 5' 'niben101scf02261_43824-48933' '(at1g13130 : 417.0) Cellulase (glycosyl hydrolase family 5) protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Ricin B-related lectin (InterPro:IPR008997), Ricin B lectin (InterPro:IPR000772), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Cellulase (glycosyl hydrolase family 5) protein (TAIR:AT3G26140.1); Has 343 Blast hits to 335 proteins in 115 species: Archae - 2; Bacteria - 129; Metazoa - 0; Fungi - 78; Plants - 115; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 834.0) & (original description: Putative BnaA06g07600D, Description = BnaA06g07600D protein, PFAM = PF00150;PF00652)' T '26.3.5' 'misc.gluco-, galacto- and mannosidases.glycosyl hydrolase family 5' 'niben101scf07965_190762-195953' '(at1g13130 : 621.0) Cellulase (glycosyl hydrolase family 5) protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Ricin B-related lectin (InterPro:IPR008997), Ricin B lectin (InterPro:IPR000772), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Cellulase (glycosyl hydrolase family 5) protein (TAIR:AT3G26140.1); Has 343 Blast hits to 335 proteins in 115 species: Archae - 2; Bacteria - 129; Metazoa - 0; Fungi - 78; Plants - 115; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|84563 : 80.4) no description available & (reliability: 1242.0) & (original description: Putative At1g13130, Description = At1g13130, PFAM = PF00150)' T '26.3.5' 'misc.gluco-, galacto- and mannosidases.glycosyl hydrolase family 5' 'niben101scf10840_14169-19595' '(at1g13130 : 441.0) Cellulase (glycosyl hydrolase family 5) protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Ricin B-related lectin (InterPro:IPR008997), Ricin B lectin (InterPro:IPR000772), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Cellulase (glycosyl hydrolase family 5) protein (TAIR:AT3G26140.1); Has 343 Blast hits to 335 proteins in 115 species: Archae - 2; Bacteria - 129; Metazoa - 0; Fungi - 78; Plants - 115; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 882.0) & (original description: Putative At1g13130, Description = At1g13130, PFAM = PF00150)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.3scaffold15049_2095-5651' '(at3g58100 : 136.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 5 (PDCB5); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasmodesma, anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G29380.1); Has 1455 Blast hits to 1408 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 65; Plants - 1390; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 110.0) no description available & (reliability: 272.0) & (original description: Putative PDCB5, Description = Glucan endo-1,3-beta-glucosidase-like protein 1, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.3scaffold20287_14635-20771' '(at3g58100 : 140.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 5 (PDCB5); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasmodesma, anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G29380.1); Has 1455 Blast hits to 1408 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 65; Plants - 1390; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 107.0) no description available & (reliability: 280.0) & (original description: Putative PDCB5, Description = Glucan endo-1,3-beta-glucosidase-like protein 1, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.3scaffold20287_14925-21123' '(at3g58100 : 140.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 5 (PDCB5); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasmodesma, anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G29380.1); Has 1455 Blast hits to 1408 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 65; Plants - 1390; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 108.0) no description available & (reliability: 280.0) & (original description: Putative PDCB5, Description = Glucan endo-1,3-beta-glucosidase-like protein 1, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.3scaffold39719_14028-19018' '(at2g30933 : 154.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G09460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87420 : 118.0) no description available & (p52409|e13b_wheat : 88.2) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 308.0) & (original description: Putative Sb09g029700, Description = Putative uncharacterized protein Sb09g029700, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.3scaffold43544_14103-17806' '(at5g64790 : 299.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p52409|e13b_wheat : 168.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 152.0) no description available & (reliability: 598.0) & (original description: Putative PGSC0003DMG400014912, Description = Putative glucan endo-1,3-beta-glucosidase 8-like, PFAM = PF07983;PF00332)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.3scaffold46605_9016-14661' '(at4g33840 : 537.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 188.0) no description available & (reliability: 1046.0) & (original description: Putative xyn3, Description = Glycosyl hydrolase family 10 protein, PFAM = PF00331)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.3scaffold63879_1-2653' '(at5g35740 : 122.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT2G04910.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87420 : 98.4) no description available & (reliability: 244.0) & (original description: Putative BnaC04g29770D, Description = BnaC04g29770D protein, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.3scaffold79028_2800-7212' '(at1g18650 : 110.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 3 (PDCB3); CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glucan endo-1,3-beta-glucosidase-like protein 3 (TAIR:AT5G08000.1); Has 1473 Blast hits to 1425 proteins in 72 species: Archae - 4; Bacteria - 6; Metazoa - 5; Fungi - 46; Plants - 1391; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|87420 : 105.0) no description available & (reliability: 220.0) & (original description: Putative BnaCnng26200D, Description = BnaCnng26200D protein, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.3scaffold81477_1-3453' '(at2g30933 : 151.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G09460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87420 : 119.0) no description available & (p52409|e13b_wheat : 87.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 302.0) & (original description: Putative PGSC0003DMG400017347, Description = Carbohydrate-binding X8 domain protein, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.3scaffold95926_624-4331' '(at1g79480 : 122.0) Carbohydrate-binding X8 domain superfamily protein; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G67460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87420 : 121.0) no description available & (reliability: 244.0) & (original description: Putative Sb02g032805, Description = Putative uncharacterized protein Sb02g032805, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.5scaffold564_527411-531001' '(at1g30080 : 488.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT4G18340.1); Has 2128 Blast hits to 2112 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 18; Plants - 2098; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|84700 : 285.0) no description available & (p52409|e13b_wheat : 244.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 936.0) & (original description: Putative At1g32860, Description = Glucan endo-1,3-beta-glucosidase 11, PFAM = PF00332)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.5scaffold1137_348182-351666' '(at3g58100 : 122.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 5 (PDCB5); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasmodesma, anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G29380.1); Has 1455 Blast hits to 1408 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 65; Plants - 1390; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 100.0) no description available & (reliability: 244.0) & (original description: Putative PDCB5, Description = Glucan endo-1,3-beta-glucosidase-like protein 1, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.5scaffold2393_145991-152083' '(at3g58100 : 138.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 5 (PDCB5); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasmodesma, anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G29380.1); Has 1455 Blast hits to 1408 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 65; Plants - 1390; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 109.0) no description available & (reliability: 276.0) & (original description: Putative PDCB5, Description = Glucan endo-1,3-beta-glucosidase-like protein 1, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.5scaffold2445_202268-213261' '(at4g33840 : 502.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 192.0) no description available & (reliability: 992.0) & (original description: Putative PGSC0003DMG400014606, Description = Glycosyl hydrolase family 10 protein, PFAM = PF00331)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.5scaffold2886_207731-212283' '(at1g18650 : 110.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 3 (PDCB3); CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glucan endo-1,3-beta-glucosidase-like protein 3 (TAIR:AT5G08000.1); Has 1473 Blast hits to 1425 proteins in 72 species: Archae - 4; Bacteria - 6; Metazoa - 5; Fungi - 46; Plants - 1391; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|87420 : 106.0) no description available & (reliability: 220.0) & (original description: Putative At1g26450, Description = Carbohydrate-binding X8 domain-containing protein, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.5scaffold3069_214317-259744' '(at2g30933 : 154.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G09460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87420 : 120.0) no description available & (p52409|e13b_wheat : 88.6) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 308.0) & (original description: Putative BnaA04g17980D, Description = BnaA04g17980D protein, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.5scaffold5939_97662-107006' '(at4g33840 : 559.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 192.0) no description available & (reliability: 1074.0) & (original description: Putative At4g33840, Description = At4g33840/F17I5_30, PFAM = PF02018;PF00331)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'nbv0.5scaffold6733_64538-68711' '(at2g19440 : 173.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT1G64760.2); Has 2685 Blast hits to 2621 proteins in 154 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 44; Plants - 2618; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (p52409|e13b_wheat : 87.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 86.1) no description available & (reliability: 334.0) & (original description: Putative PGSC0003DMG400014912, Description = Putative glucan endo-1,3-beta-glucosidase 8-like, PFAM = PF07983;PF00332)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben044scf00000050ctg019_1206-12133' '(at1g79480 : 129.0) Carbohydrate-binding X8 domain superfamily protein; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G67460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87420 : 120.0) no description available & (reliability: 258.0) & (original description: Putative Sb02g032805, Description = Putative uncharacterized protein Sb02g032805, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben044scf00000286ctg009_1391-8886' '(at4g33840 : 497.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 192.0) no description available & (reliability: 990.0) & (original description: Putative BnaA03g50660D, Description = BnaA03g50660D protein, PFAM = PF00331;PF02018)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben044scf00012955ctg003_1-2914' '(at4g29360 : 338.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G56590.1); Has 2823 Blast hits to 2771 proteins in 139 species: Archae - 1; Bacteria - 6; Metazoa - 3; Fungi - 12; Plants - 2788; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p52409|e13b_wheat : 294.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 285.0) no description available & (reliability: 676.0) & (original description: Putative At5g24318, Description = O-Glycosyl hydrolases family 17 protein, PFAM = PF07983;PF00332)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben044scf00013340ctg024_1941-5617' '(at3g58100 : 137.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 5 (PDCB5); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasmodesma, anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G29380.1); Has 1455 Blast hits to 1408 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 65; Plants - 1390; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 110.0) no description available & (reliability: 274.0) & (original description: Putative PDCB5, Description = Glucan endo-1,3-beta-glucosidase-like protein 1, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben044scf00026509ctg003_8262-11032' '(at1g18650 : 138.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 3 (PDCB3); CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glucan endo-1,3-beta-glucosidase-like protein 3 (TAIR:AT5G08000.1); Has 1473 Blast hits to 1425 proteins in 72 species: Archae - 4; Bacteria - 6; Metazoa - 5; Fungi - 46; Plants - 1391; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|87420 : 101.0) no description available & (p52409|e13b_wheat : 91.7) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 276.0) & (original description: Putative E13L3, Description = CBM43-containing protein, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben044scf00026996ctg001_1-2617' '(at4g31140 : 291.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G58090.1); Has 2782 Blast hits to 2712 proteins in 151 species: Archae - 0; Bacteria - 6; Metazoa - 4; Fungi - 39; Plants - 2723; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (p52409|e13b_wheat : 101.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 100.0) no description available & (reliability: 582.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF07983;PF00332)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben044scf00027077ctg008_1386-4971' '(at1g30080 : 493.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT4G18340.1); Has 2128 Blast hits to 2112 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 18; Plants - 2098; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|84700 : 282.0) no description available & (p52409|e13b_wheat : 244.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 944.0) & (original description: Putative BnaA08g17590D, Description = BnaA08g17590D protein, PFAM = PF00332)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben044scf00027738ctg002_8436-12483' '(at1g18650 : 111.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 3 (PDCB3); CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glucan endo-1,3-beta-glucosidase-like protein 3 (TAIR:AT5G08000.1); Has 1473 Blast hits to 1425 proteins in 72 species: Archae - 4; Bacteria - 6; Metazoa - 5; Fungi - 46; Plants - 1391; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|87420 : 110.0) no description available & (p52409|e13b_wheat : 89.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 222.0) & (original description: Putative PDCB3, Description = PLASMODESMATA CALLOSE-BINDING PROTEIN 3, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben044scf00029932ctg003_3034-6131' '(at1g78520 : 129.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT2G43670.1); Has 1475 Blast hits to 1425 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1473; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 96.5) no description available & (p52409|e13b_wheat : 85.9) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 258.0) & (original description: Putative BnaA07g39130D, Description = BnaA07g39130D protein, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben044scf00030454ctg001_39519-44445' '(at5g20870 : 602.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 2792 Blast hits to 2718 proteins in 160 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 51; Plants - 2724; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 234.0) no description available & (q03773|e13a_soybn : 208.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Glycine max (Soybean) & (reliability: 1200.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF00332;PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben044scf00032036ctg004_2356-8246' '(at3g58100 : 119.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 5 (PDCB5); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasmodesma, anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G29380.1); Has 1455 Blast hits to 1408 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 65; Plants - 1390; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 103.0) no description available & (reliability: 238.0) & (original description: Putative BnaC04g52820D, Description = BnaC04g52820D protein, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben044scf00035404ctg000_2978-7946' '(at4g33840 : 575.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 192.0) no description available & (reliability: 1104.0) & (original description: Putative At4g33840, Description = At4g33840/F17I5_30, PFAM = PF02018;PF00331)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben044scf00054623ctg001_769-6510' '(at5g58480 : 602.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G17180.1); Has 2632 Blast hits to 2560 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 17; Plants - 2601; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|84700 : 225.0) no description available & (p52408|e13b_prupe : 202.0) Glucan endo-1,3-beta-glucosidase, basic isoform precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PpGns1) - Prunus persica (Peach) & (reliability: 1204.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF07983;PF00332)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf00113_408874-419694' '(at4g33830 : 454.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Galactose-binding domain-like (InterPro:IPR008979), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47910 : 178.0) no description available & (reliability: 870.0) & (original description: Putative Sb01g043720, Description = Putative uncharacterized protein Sb01g043720, PFAM = PF00331;PF02018)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf00160_858610-861707' '(at1g78520 : 132.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT2G43670.1); Has 1475 Blast hits to 1425 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1473; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 98.0) no description available & (p52409|e13b_wheat : 86.7) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 264.0) & (original description: Putative BnaA07g39130D, Description = BnaA07g39130D protein, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf00402_119587-123723' '(gnl|cdd|87420 : 127.0) no description available & (at1g09460 : 123.0) Carbohydrate-binding X8 domain superfamily protein; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT2G30933.1); Has 28400 Blast hits to 14800 proteins in 1032 species: Archae - 269; Bacteria - 5437; Metazoa - 8038; Fungi - 2740; Plants - 5953; Viruses - 1223; Other Eukaryotes - 4740 (source: NCBI BLink). & (p52409|e13b_wheat : 95.9) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 246.0) & (original description: Putative Glu2, Description = Carbohydrate-binding X8 domain protein, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf00635_900956-905550' '(at1g18650 : 110.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 3 (PDCB3); CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glucan endo-1,3-beta-glucosidase-like protein 3 (TAIR:AT5G08000.1); Has 1473 Blast hits to 1425 proteins in 72 species: Archae - 4; Bacteria - 6; Metazoa - 5; Fungi - 46; Plants - 1391; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|87420 : 106.0) no description available & (reliability: 220.0) & (original description: Putative Sb02g032805, Description = Putative uncharacterized protein Sb02g032805, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf01006_410054-414554' '(at5g64790 : 532.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84700 : 249.0) no description available & (p52409|e13b_wheat : 203.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1064.0) & (original description: Putative bgl, Description = Beta-1,3-glucanase, acidic, PFAM = PF07983;PF00332)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf01250_23210-27674' '(at2g30933 : 151.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G09460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87420 : 115.0) no description available & (p52409|e13b_wheat : 85.5) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 302.0) & (original description: Putative Sb09g029700, Description = Putative uncharacterized protein Sb09g029700, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf01521_260805-265039' '(at1g18650 : 123.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 3 (PDCB3); CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glucan endo-1,3-beta-glucosidase-like protein 3 (TAIR:AT5G08000.1); Has 1473 Blast hits to 1425 proteins in 72 species: Archae - 4; Bacteria - 6; Metazoa - 5; Fungi - 46; Plants - 1391; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|87420 : 112.0) no description available & (p52409|e13b_wheat : 90.1) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 246.0) & (original description: Putative BnaC08g40090D, Description = BnaC08g40090D protein, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf01779_132331-136447' '(at4g31140 : 637.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G58090.1); Has 2782 Blast hits to 2712 proteins in 151 species: Archae - 0; Bacteria - 6; Metazoa - 4; Fungi - 39; Plants - 2723; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|84700 : 235.0) no description available & (p36401|e13h_tobac : 195.0) Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PR-35) - Nicotiana tabacum (Common tobacco) & (reliability: 1274.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF00332;PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf01785_1007222-1010337' '(gnl|cdd|87420 : 95.7) no description available & (at3g55430 : 88.2) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 17 protein (TAIR:AT2G39640.1); Has 2877 Blast hits to 2804 proteins in 154 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 42; Plants - 2822; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative glysoja_018737, Description = Glucan endo-1,3-beta-glucosidase, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf02232_537317-540906' '(at1g30080 : 494.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT4G18340.1); Has 2128 Blast hits to 2112 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 18; Plants - 2098; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|84700 : 284.0) no description available & (p52409|e13b_wheat : 244.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 952.0) & (original description: Putative At1g32860, Description = Glucan endo-1,3-beta-glucosidase 11, PFAM = PF00332)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf02317_103860-107830' '(at5g55180 : 577.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G26830.1); Has 563 Blast hits to 555 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 554; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 314.0) no description available & (p52409|e13b_wheat : 294.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1154.0) & (original description: Putative B29, Description = Beta-1,3-glucanase-like protein, PFAM = PF07983;PF00332)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf03045_129200-140613' '(gnl|cdd|84700 : 299.0) no description available & (at4g26830 : 250.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G55180.1); Has 2849 Blast hits to 2768 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 8; Plants - 2823; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (q03773|e13a_soybn : 238.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Glycine max (Soybean) & (reliability: 500.0) & (original description: Putative bgl, Description = Beta-1,3-glucanase, PFAM = PF00332)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf03541_87903-92433' '(at5g35740 : 138.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT2G04910.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87420 : 110.0) no description available & (reliability: 276.0) & (original description: Putative At5g35740, Description = At5g35740, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf04400_327144-331019' '(at1g18650 : 114.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 3 (PDCB3); CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glucan endo-1,3-beta-glucosidase-like protein 3 (TAIR:AT5G08000.1); Has 1473 Blast hits to 1425 proteins in 72 species: Archae - 4; Bacteria - 6; Metazoa - 5; Fungi - 46; Plants - 1391; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|87420 : 109.0) no description available & (reliability: 228.0) & (original description: Putative BnaAnng06790D, Description = BnaAnng06790D protein, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf04500_32815-36631' '(at5g64790 : 297.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p52409|e13b_wheat : 162.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 154.0) no description available & (reliability: 594.0) & (original description: Putative PGSC0003DMG400014912, Description = Putative glucan endo-1,3-beta-glucosidase 8-like, PFAM = PF07983;PF00332)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf04500_489400-493520' '(at3g24330 : 327.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 2751 Blast hits to 2684 proteins in 166 species: Archae - 0; Bacteria - 16; Metazoa - 4; Fungi - 44; Plants - 2678; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 188.0) no description available & (p52409|e13b_wheat : 169.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 638.0) & (original description: Putative bgl, Description = Putative glucan endo-1,3-beta-glucosidase 8-like, PFAM = PF00332;PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf04554_636392-642034' '(at5g58090 : 631.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84700 : 237.0) no description available & (p36401|e13h_tobac : 195.0) Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PR-35) - Nicotiana tabacum (Common tobacco) & (reliability: 1260.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF07983;PF00332)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf04741_528059-530602' '(at1g78520 : 114.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT2G43670.1); Has 1475 Blast hits to 1425 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1473; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 89.5) no description available & (reliability: 228.0) & (original description: Putative At1g78520, Description = Carbohydrate-binding X8 domain-containing protein, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf05029_46939-51910' '(at4g05430 : 151.0) Carbohydrate-binding X8 domain superfamily protein; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G09460.1); Has 1391 Blast hits to 1343 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 1374; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|87420 : 133.0) no description available & (p52409|e13b_wheat : 107.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 302.0) & (original description: Putative At4g05430, Description = Carbohydrate-binding X8 domain-containing protein, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf05295_266054-373999' '(at1g79480 : 134.0) Carbohydrate-binding X8 domain superfamily protein; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G67460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87420 : 126.0) no description available & (reliability: 268.0) & (original description: Putative Sb02g032805, Description = Putative uncharacterized protein Sb02g032805, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf05621_34280-77701' '(at1g67490 : 1072.0) Encodes an alpha-glucosidase I enzyme that catalyzes the first step in N-linked glycan processing. Localized to the endoplasmic reticulum (ER).; glucosidase 1 (GCS1); FUNCTIONS IN: alpha-glucosidase activity; INVOLVED IN: root epidermal cell differentiation, epidermal cell differentiation; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 63 (InterPro:IPR004888), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Six-hairpin glycosidases superfamily protein (TAIR:AT1G24320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86272 : 845.0) no description available & (gnl|cdd|37372 : 763.0) no description available & (reliability: 2014.0) & (original description: Putative GCS1, Description = Mannosyl-oligosaccharide glucosidase GCS1, PFAM = PF03200;PF16923)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf06301_102503-109415' '(gnl|cdd|87420 : 135.0) no description available & (at2g30933 : 114.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G09460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p52409|e13b_wheat : 89.4) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 228.0) & (original description: Putative Glu2, Description = Carbohydrate-binding X8 domain protein, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf06826_594757-600011' '(at3g24330 : 288.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 2751 Blast hits to 2684 proteins in 166 species: Archae - 0; Bacteria - 16; Metazoa - 4; Fungi - 44; Plants - 2678; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 193.0) no description available & (p23433|e13d_tobac : 147.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Nicotiana tabacum (Common tobacco) & (reliability: 536.0) & (original description: Putative PGSC0003DMG400014912, Description = Putative glucan endo-1,3-beta-glucosidase 8-like, PFAM = PF00332;PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf06933_232245-235297' '(at5g67460 : 130.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G13560.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87420 : 120.0) no description available & (reliability: 252.0) & (original description: Putative PDCB3, Description = Hydrolase, hydrolyzing O-glycosyl compounds, putative, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf07304_129990-134830' '(at5g20870 : 600.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 2792 Blast hits to 2718 proteins in 160 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 51; Plants - 2724; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 234.0) no description available & (q03773|e13a_soybn : 206.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Glycine max (Soybean) & (reliability: 1190.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF00332;PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf07608_235805-241969' '(at4g33840 : 529.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 185.0) no description available & (reliability: 1032.0) & (original description: Putative Sb01g043720, Description = Putative uncharacterized protein Sb01g043720, PFAM = PF00331;PF02018)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf07883_419348-422832' '(at3g58100 : 133.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 5 (PDCB5); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasmodesma, anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G29380.1); Has 1455 Blast hits to 1408 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 65; Plants - 1390; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 108.0) no description available & (reliability: 266.0) & (original description: Putative PDCB5, Description = PLASMODESMATA CALLOSE-BINDING PROTEIN 5, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf08753_297035-302171' '(at4g05430 : 150.0) Carbohydrate-binding X8 domain superfamily protein; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G09460.1); Has 1391 Blast hits to 1343 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 1374; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|87420 : 129.0) no description available & (p52409|e13b_wheat : 110.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 300.0) & (original description: Putative GLC1, Description = X8-like protein, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf09191_250443-256576' '(at3g58100 : 140.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 5 (PDCB5); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasmodesma, anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G29380.1); Has 1455 Blast hits to 1408 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 65; Plants - 1390; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 107.0) no description available & (reliability: 280.0) & (original description: Putative PDCB5, Description = Glucan endo-1,3-beta-glucosidase-like protein 1, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf09191_250742-263321' '(at3g58100 : 138.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 5 (PDCB5); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasmodesma, anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G29380.1); Has 1455 Blast hits to 1408 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 65; Plants - 1390; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 108.0) no description available & (reliability: 276.0) & (original description: Putative PDCB5, Description = Glucan endo-1,3-beta-glucosidase-like protein 1, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf09505_171063-176787' '(at4g33840 : 547.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 188.0) no description available & (reliability: 1068.0) & (original description: Putative BnaAnng29520D, Description = BnaAnng29520D protein, PFAM = PF00331)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf09505_171279-174402' '(at4g33840 : 229.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 147.0) no description available & (reliability: 424.0) & (original description: Putative xyn3, Description = Glycosyl hydrolase family 10 protein, PFAM = PF00331)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf09654_141856-146995' '(at4g33840 : 518.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|47910 : 191.0) no description available & (reliability: 1026.0) & (original description: Putative BnaAnng29520D, Description = BnaAnng29520D protein, PFAM = PF00331;PF02018)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf09684_13390-22624' '(at2g30933 : 150.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G09460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87420 : 120.0) no description available & (p52409|e13b_wheat : 86.3) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 300.0) & (original description: Putative BnaA04g17980D, Description = BnaA04g17980D protein, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf10852_250988-254857' '(at2g30933 : 149.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G09460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87420 : 119.0) no description available & (p52409|e13b_wheat : 87.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 298.0) & (original description: Putative PGSC0003DMG400017347, Description = Carbohydrate-binding X8 domain protein, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf11757_334398-338074' '(at3g58100 : 139.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 5 (PDCB5); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasmodesma, anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G29380.1); Has 1455 Blast hits to 1408 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 65; Plants - 1390; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 110.0) no description available & (reliability: 278.0) & (original description: Putative PDCB5, Description = Glucan endo-1,3-beta-glucosidase-like protein 1, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf15326_59668-62588' '(at5g35740 : 145.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT2G04910.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87420 : 119.0) no description available & (reliability: 290.0) & (original description: Putative BnaC04g29770D, Description = BnaC04g29770D protein, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf15972_148648-167749' '(at1g18650 : 134.0) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.; plasmodesmata callose-binding protein 3 (PDCB3); CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glucan endo-1,3-beta-glucosidase-like protein 3 (TAIR:AT5G08000.1); Has 1473 Blast hits to 1425 proteins in 72 species: Archae - 4; Bacteria - 6; Metazoa - 5; Fungi - 46; Plants - 1391; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|87420 : 104.0) no description available & (p52409|e13b_wheat : 89.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 268.0) & (original description: Putative PDCB3, Description = PLASMODESMATA CALLOSE-BINDING PROTEIN 3, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf18513_4728-7684' '(at5g67460 : 131.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G13560.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87420 : 129.0) no description available & (reliability: 238.0) & (original description: Putative pr2, Description = CBM43-containing protein, PFAM = PF07983)' T '26.4' 'misc.beta 1,3 glucan hydrolases' 'niben101scf18669_17238-20995' '(at5g64790 : 279.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p52409|e13b_wheat : 154.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 136.0) no description available & (reliability: 558.0) & (original description: Putative PGSC0003DMG400014912, Description = Putative glucan endo-1,3-beta-glucosidase 8-like, PFAM = PF07983;PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.3scaffold1787_24638-29256' '(at2g05790 : 694.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G55180.1); Has 2832 Blast hits to 2751 proteins in 138 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 13; Plants - 2801; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|84700 : 312.0) no description available & (p52409|e13b_wheat : 285.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1388.0) & (original description: Putative At2g01630, Description = Glucan endo-1,3-beta-glucosidase 3, PFAM = PF00332;PF07983)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.3scaffold8256_42047-48123' '(at1g66250 : 659.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT2G01630.1); Has 2879 Blast hits to 2803 proteins in 166 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 66; Plants - 2798; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|84700 : 266.0) no description available & (p52409|e13b_wheat : 232.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1318.0) & (original description: Putative At1g66250, Description = Glucan endo-1,3-beta-glucosidase 2, PFAM = PF07983;PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.3scaffold9822_41869-47786' '(at3g15800 : 473.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT2G26600.1); Has 2147 Blast hits to 2134 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 2137; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|84700 : 284.0) no description available & (q02439|e13f_horvu : 209.0) Putative glucan endo-1,3-beta-glucosidase GVI precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase GVI) ((1->3)-beta-glucanase isoenzyme GVI) (Beta-1,3-endoglucanase GVI) (Fragment) - Hordeum vulgare (Barley) & (reliability: 946.0) & (original description: Putative At2g27500, Description = Glucan endo-1,3-beta-glucosidase 14, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.3scaffold18020_3094-8467' '(at3g55430 : 466.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 17 protein (TAIR:AT2G39640.1); Has 2877 Blast hits to 2804 proteins in 154 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 42; Plants - 2822; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (p52409|e13b_wheat : 395.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 248.0) no description available & (reliability: 932.0) & (original description: Putative gns2, Description = Beta-1,3 glucanase, PFAM = PF07983;PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.3scaffold42831_1212-6980' '(at2g01630 : 640.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT1G66250.1); Has 2147 Blast hits to 2131 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 5; Plants - 2133; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|84700 : 273.0) no description available & (p52409|e13b_wheat : 238.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1280.0) & (original description: Putative glysoja_023433, Description = Glucan endo-1,3-beta-glucosidase 3, PFAM = PF07983;PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.3scaffold43544_14103-17806' '(at5g64790 : 299.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p52409|e13b_wheat : 168.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 152.0) no description available & (reliability: 586.0) & (original description: Putative PGSC0003DMG400014912, Description = Putative glucan endo-1,3-beta-glucosidase 8-like, PFAM = PF07983;PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.3scaffold62240_1-7617' '(at2g26600 : 514.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G15800.1); Has 2078 Blast hits to 2068 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 2; Plants - 2065; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|84700 : 285.0) no description available & (p52399|e13l_tobac : 218.0) Glucan endo-1,3-beta-glucosidase, acidic isoform GL153 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Nicotiana tabacum (Common tobacco) & (reliability: 1028.0) & (original description: Putative Glc2, Description = Beta-1,3-glucanase, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.3scaffold68355_1-3094' '(at3g24330 : 593.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 2751 Blast hits to 2684 proteins in 166 species: Archae - 0; Bacteria - 16; Metazoa - 4; Fungi - 44; Plants - 2678; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 244.0) no description available & (p36401|e13h_tobac : 210.0) Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PR-35) - Nicotiana tabacum (Common tobacco) & (reliability: 1186.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF07983;PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.5scaffold235_114036-120777' '(at3g55430 : 449.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 17 protein (TAIR:AT2G39640.1); Has 2877 Blast hits to 2804 proteins in 154 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 42; Plants - 2822; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (p52409|e13b_wheat : 380.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 235.0) no description available & (reliability: 898.0) & (original description: Putative gns2, Description = Glucan endo-1,3-beta-glucosidase, PFAM = PF07983;PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.5scaffold564_527411-531001' '(at1g30080 : 488.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT4G18340.1); Has 2128 Blast hits to 2112 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 18; Plants - 2098; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|84700 : 285.0) no description available & (p52409|e13b_wheat : 244.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 976.0) & (original description: Putative At1g32860, Description = Glucan endo-1,3-beta-glucosidase 11, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.5scaffold994_12237-63612' '(at3g13560 : 509.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT2G01630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84700 : 263.0) no description available & (p52409|e13b_wheat : 216.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|35638 : 202.0) no description available & (reliability: 1018.0) & (original description: Putative At3g13560, Description = Glucan endo-1,3-beta-glucosidase 4, PFAM = PF07983;PF00332;PF00179)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.5scaffold1653_1-18990' '(p23547|e13g_tobac : 410.0) Glucan endo-1,3-beta-glucosidase, acidic isoform GI9 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PR-2B) (PR-36) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84700 : 374.0) no description available & (at4g16260 : 317.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1 (TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5; Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 634.0) & (original description: Putative PR2, Description = Glucan endo-1,3-beta-glucosidase, acidic isoform GI9, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.5scaffold1765_272176-279678' '(p23547|e13g_tobac : 409.0) Glucan endo-1,3-beta-glucosidase, acidic isoform GI9 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PR-2B) (PR-36) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84700 : 401.0) no description available & (at4g16260 : 315.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1 (TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5; Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 630.0) & (original description: Putative bgl, Description = Beta-1,3-glucanase, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.5scaffold4077_135383-197843' '(at1g32860 : 436.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase_putative (TAIR:AT5G42100.1); Has 2148 Blast hits to 2131 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 2; Plants - 2133; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|84700 : 273.0) no description available & (p52409|e13b_wheat : 231.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 872.0) & (original description: Putative BGlu, Description = Glucan endo-1,3-beta-glucosidase 14, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.5scaffold4925_164288-168784' '(at3g55430 : 449.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 17 protein (TAIR:AT2G39640.1); Has 2877 Blast hits to 2804 proteins in 154 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 42; Plants - 2822; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (p52409|e13b_wheat : 387.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 257.0) no description available & (reliability: 898.0) & (original description: Putative gns2, Description = Beta-1,3 glucanase, PFAM = PF07983;PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'nbv0.5scaffold6733_64538-68711' '(at2g19440 : 173.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT1G64760.2); Has 2685 Blast hits to 2621 proteins in 154 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 44; Plants - 2618; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (p52409|e13b_wheat : 87.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 86.1) no description available & (reliability: 346.0) & (original description: Putative PGSC0003DMG400014912, Description = Putative glucan endo-1,3-beta-glucosidase 8-like, PFAM = PF07983;PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben044scf00002178ctg006_2258-6967' '(at3g13560 : 523.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT2G01630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84700 : 259.0) no description available & (p52409|e13b_wheat : 223.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1046.0) & (original description: Putative At3g13560, Description = Glucan endo-1,3-beta-glucosidase 4, PFAM = PF00332;PF07983)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben044scf00010094ctg003_3358-9660' '(at5g56590 : 660.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G29360.1); Has 2891 Blast hits to 2808 proteins in 162 species: Archae - 0; Bacteria - 8; Metazoa - 4; Fungi - 51; Plants - 2805; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|84700 : 314.0) no description available & (p52409|e13b_wheat : 292.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1320.0) & (original description: Putative At5g56590, Description = Glucan endo-1,3-beta-glucosidase 13, PFAM = PF07983;PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben044scf00012955ctg003_1-2914' '(at4g29360 : 338.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G56590.1); Has 2823 Blast hits to 2771 proteins in 139 species: Archae - 1; Bacteria - 6; Metazoa - 3; Fungi - 12; Plants - 2788; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p52409|e13b_wheat : 294.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 285.0) no description available & (reliability: 664.0) & (original description: Putative At5g24318, Description = O-Glycosyl hydrolases family 17 protein, PFAM = PF07983;PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben044scf00015467ctg006_137-3779' '(at2g26600 : 516.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G15800.1); Has 2078 Blast hits to 2068 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 2; Plants - 2065; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|84700 : 291.0) no description available & (p52399|e13l_tobac : 219.0) Glucan endo-1,3-beta-glucosidase, acidic isoform GL153 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Nicotiana tabacum (Common tobacco) & (reliability: 1032.0) & (original description: Putative Glc2, Description = Beta-1,3-glucanase, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben044scf00026996ctg001_1-2617' '(at4g31140 : 291.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G58090.1); Has 2782 Blast hits to 2712 proteins in 151 species: Archae - 0; Bacteria - 6; Metazoa - 4; Fungi - 39; Plants - 2723; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (p52409|e13b_wheat : 101.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 100.0) no description available & (reliability: 560.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF07983;PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben044scf00027077ctg008_1386-4971' '(at1g30080 : 493.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT4G18340.1); Has 2128 Blast hits to 2112 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 18; Plants - 2098; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|84700 : 282.0) no description available & (p52409|e13b_wheat : 244.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 986.0) & (original description: Putative BnaA08g17590D, Description = BnaA08g17590D protein, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben044scf00030454ctg001_39519-44445' '(at5g20870 : 602.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 2792 Blast hits to 2718 proteins in 160 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 51; Plants - 2724; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 234.0) no description available & (q03773|e13a_soybn : 208.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Glycine max (Soybean) & (reliability: 1146.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF00332;PF07983)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben044scf00030945ctg000_1-2676' '(at3g15800 : 472.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT2G26600.1); Has 2147 Blast hits to 2134 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 2137; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|84700 : 287.0) no description available & (q02438|e13e_horvu : 211.0) Glucan endo-1,3-beta-glucosidase GV (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase GV) ((1->3)-beta-glucanase isoenzyme GV) (Beta-1,3-endoglucanase GV) - Hordeum vulgare (Barley) & (reliability: 944.0) & (original description: Putative At2g27500, Description = Glucan endo-1,3-beta-glucosidase 14, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf01001_26347-29987' '(p23433|e13d_tobac : 638.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84700 : 423.0) no description available & (at4g16260 : 333.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1 (TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5; Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 666.0) & (original description: Putative SP41A, Description = Glucan endo-1,3-beta-glucosidase, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf01001_44647-73679' '(p23547|e13g_tobac : 596.0) Glucan endo-1,3-beta-glucosidase, acidic isoform GI9 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PR-2B) (PR-36) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84700 : 420.0) no description available & (at4g16260 : 333.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1 (TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5; Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 666.0) & (original description: Putative PR2, Description = Glucan endo-1,3-beta-glucosidase, acidic isoform GI9, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf01006_410054-414554' '(at5g64790 : 532.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84700 : 249.0) no description available & (p52409|e13b_wheat : 203.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1044.0) & (original description: Putative bgl, Description = Beta-1,3-glucanase, acidic, PFAM = PF07983;PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf01033_97388-111409' '(at2g01630 : 655.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT1G66250.1); Has 2147 Blast hits to 2131 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 5; Plants - 2133; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|84700 : 272.0) no description available & (p52409|e13b_wheat : 237.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1310.0) & (original description: Putative KK1_016035, Description = Glucan endo-1,3-beta-glucosidase 3, PFAM = PF00332;PF07983)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf01413_155244-162006' '(at3g55430 : 468.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 17 protein (TAIR:AT2G39640.1); Has 2877 Blast hits to 2804 proteins in 154 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 42; Plants - 2822; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (p52409|e13b_wheat : 399.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 247.0) no description available & (reliability: 936.0) & (original description: Putative gns2, Description = Beta-1,3 glucanase, PFAM = PF07983;PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf01779_132331-136447' '(at4g31140 : 637.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G58090.1); Has 2782 Blast hits to 2712 proteins in 151 species: Archae - 0; Bacteria - 6; Metazoa - 4; Fungi - 39; Plants - 2723; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|84700 : 235.0) no description available & (p36401|e13h_tobac : 195.0) Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PR-35) - Nicotiana tabacum (Common tobacco) & (reliability: 1272.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF00332;PF07983)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf01785_1007222-1010337' '(gnl|cdd|87420 : 95.7) no description available & (at3g55430 : 88.2) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 17 protein (TAIR:AT2G39640.1); Has 2877 Blast hits to 2804 proteins in 154 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 42; Plants - 2822; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative glysoja_018737, Description = Glucan endo-1,3-beta-glucosidase, PFAM = PF07983)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf01927_514936-519266' '(at5g56590 : 655.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G29360.1); Has 2891 Blast hits to 2808 proteins in 162 species: Archae - 0; Bacteria - 8; Metazoa - 4; Fungi - 51; Plants - 2805; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|84700 : 311.0) no description available & (p52409|e13b_wheat : 293.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1310.0) & (original description: Putative At5g56590, Description = Glucan endo-1,3-beta-glucosidase 13, PFAM = PF07983;PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf01934_243182-247234' '(p27666|e13f_tobac : 704.0) Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GLB precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase, basic) (Glucanase GLB) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84700 : 445.0) no description available & (at4g16260 : 368.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1 (TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5; Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 736.0) & (original description: Putative bgl, Description = Beta-1,3-glucanase, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf02014_50457-55801' '(at3g55430 : 444.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 17 protein (TAIR:AT2G39640.1); Has 2877 Blast hits to 2804 proteins in 154 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 42; Plants - 2822; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (p52409|e13b_wheat : 377.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 235.0) no description available & (reliability: 888.0) & (original description: Putative gns2, Description = Glucan endo-1,3-beta-glucosidase, PFAM = PF00332;PF07983)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf02015_242727-246621' '(at1g64760 : 464.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT2G19440.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84700 : 217.0) no description available & (p23432|e13c_tobac : 182.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Nicotiana tabacum (Common tobacco) & (reliability: 928.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 8, PFAM = PF00332;PF07983)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf02232_537317-540906' '(at1g30080 : 494.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT4G18340.1); Has 2128 Blast hits to 2112 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 18; Plants - 2098; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|84700 : 284.0) no description available & (p52409|e13b_wheat : 244.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 988.0) & (original description: Putative At1g32860, Description = Glucan endo-1,3-beta-glucosidase 11, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf02317_103860-107830' '(at5g55180 : 577.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G26830.1); Has 563 Blast hits to 555 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 554; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 314.0) no description available & (p52409|e13b_wheat : 294.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1096.0) & (original description: Putative B29, Description = Beta-1,3-glucanase-like protein, PFAM = PF07983;PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf02510_543822-550077' '(at2g27500 : 471.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT1G32860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84700 : 294.0) no description available & (p52409|e13b_wheat : 254.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 942.0) & (original description: Putative Sb04g021700, Description = Putative uncharacterized protein Sb04g021700, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf02886_130769-134284' '(at5g24318 : 426.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G55430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p52409|e13b_wheat : 365.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 261.0) no description available & (reliability: 852.0) & (original description: Putative gns2, Description = Beta-1,3 glucanase, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf03045_129200-140613' '(gnl|cdd|84700 : 299.0) no description available & (at4g26830 : 250.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G55180.1); Has 2849 Blast hits to 2768 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 8; Plants - 2823; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (q03773|e13a_soybn : 238.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Glycine max (Soybean) & (reliability: 496.0) & (original description: Putative bgl, Description = Beta-1,3-glucanase, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf03455_173695-176293' '(gnl|cdd|87420 : 88.8) no description available & (at3g55430 : 82.4) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 17 protein (TAIR:AT2G39640.1); Has 2877 Blast hits to 2804 proteins in 154 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 42; Plants - 2822; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative glysoja_018737, Description = Glucan endo-1,3-beta-glucosidase, PFAM = PF07983)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf03500_273080-276314' '(at3g55780 : 323.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, embryo, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 17 protein (TAIR:AT3G61810.1); Has 2109 Blast hits to 2094 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 4; Plants - 2095; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|84700 : 207.0) no description available & (p23433|e13d_tobac : 156.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Nicotiana tabacum (Common tobacco) & (reliability: 646.0) & (original description: Putative BnaA09g35360D, Description = BnaA09g35360D protein, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf03546_191683-236967' '(at3g24330 : 645.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 2751 Blast hits to 2684 proteins in 166 species: Archae - 0; Bacteria - 16; Metazoa - 4; Fungi - 44; Plants - 2678; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 247.0) no description available & (p52408|e13b_prupe : 208.0) Glucan endo-1,3-beta-glucosidase, basic isoform precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PpGns1) - Prunus persica (Peach) & (reliability: 1290.0) & (original description: Putative bgl, Description = Beta-1,3-glucanase, acidic, PFAM = PF07983;PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf03546_231139-236907' '(at3g24330 : 645.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 2751 Blast hits to 2684 proteins in 166 species: Archae - 0; Bacteria - 16; Metazoa - 4; Fungi - 44; Plants - 2678; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 244.0) no description available & (p52408|e13b_prupe : 208.0) Glucan endo-1,3-beta-glucosidase, basic isoform precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PpGns1) - Prunus persica (Peach) & (reliability: 1290.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF00332;PF07983)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf03770_56977-66147' '(at5g58090 : 687.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84700 : 231.0) no description available & (p52409|e13b_wheat : 202.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1374.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 8, PFAM = PF00332;PF07983)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf04083_443464-446490' '(at5g24318 : 480.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G55430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p52409|e13b_wheat : 342.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 267.0) no description available & (reliability: 960.0) & (original description: Putative gns2, Description = Glucan endo-1,3-beta-glucosidase, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf04083_443705-446961' '(at5g24318 : 458.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G55430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p52409|e13b_wheat : 331.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 270.0) no description available & (reliability: 916.0) & (original description: Putative gns2, Description = Glucan endo-1,3-beta-glucosidase, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf04195_177664-181165' '(at1g32860 : 442.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase_putative (TAIR:AT5G42100.1); Has 2148 Blast hits to 2131 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 2; Plants - 2133; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|84700 : 280.0) no description available & (p52409|e13b_wheat : 237.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 884.0) & (original description: Putative At4g18340, Description = Beta-1,3-glucanase-like protein, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf04270_107868-111140' '(gnl|cdd|84700 : 354.0) no description available & (q02439|e13f_horvu : 323.0) Putative glucan endo-1,3-beta-glucosidase GVI precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase GVI) ((1->3)-beta-glucanase isoenzyme GVI) (Beta-1,3-endoglucanase GVI) (Fragment) - Hordeum vulgare (Barley) & (at3g57260 : 292.0) beta 1,3-glucanase; "beta-1,3-glucanase 2" (BGL2); FUNCTIONS IN: glucan 1,3-beta-glucosidase activity, protein binding, cellulase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: systemic acquired resistance, response to cold; LOCATED IN: apoplast, cell wall, vacuole; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 3 (TAIR:AT3G57240.1); Has 2232 Blast hits to 2218 proteins in 176 species: Archae - 0; Bacteria - 18; Metazoa - 3; Fungi - 79; Plants - 2105; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 584.0) & (original description: Putative bgl, Description = Beta-1,3-glucanase, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf04500_32815-36631' '(at5g64790 : 297.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p52409|e13b_wheat : 162.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 154.0) no description available & (reliability: 552.0) & (original description: Putative PGSC0003DMG400014912, Description = Putative glucan endo-1,3-beta-glucosidase 8-like, PFAM = PF07983;PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf04500_489400-493520' '(at3g24330 : 327.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 2751 Blast hits to 2684 proteins in 166 species: Archae - 0; Bacteria - 16; Metazoa - 4; Fungi - 44; Plants - 2678; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 188.0) no description available & (p52409|e13b_wheat : 169.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 654.0) & (original description: Putative bgl, Description = Putative glucan endo-1,3-beta-glucosidase 8-like, PFAM = PF00332;PF07983)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf04554_636392-642034' '(at5g58090 : 631.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84700 : 237.0) no description available & (p36401|e13h_tobac : 195.0) Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PR-35) - Nicotiana tabacum (Common tobacco) & (reliability: 1262.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF07983;PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf04610_152749-159059' '(at2g16230 : 474.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G34480.1); Has 576 Blast hits to 566 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 5; Plants - 566; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|84700 : 272.0) no description available & (p52409|e13b_wheat : 270.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 948.0) & (original description: Putative BnaA06g37080D, Description = BnaA06g37080D protein, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf04778_308460-315705' '(at4g34480 : 486.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT2G16230.1); Has 576 Blast hits to 566 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 570; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|84700 : 285.0) no description available & (p52409|e13b_wheat : 265.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 958.0) & (original description: Putative OLE9, Description = Glucan endo-1,3-beta-D-glucosidase, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf04869_286254-289890' '(p52398|e13k_tobac : 599.0) Glucan endo-1,3-beta-glucosidase, acidic isoform GL161 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84700 : 418.0) no description available & (at4g16260 : 323.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1 (TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5; Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 646.0) & (original description: Putative GGL4, Description = Glucan endo-1,3-beta-glucosidase, acidic isoform GL153, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf05206_1-4503' '(at3g55430 : 455.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 17 protein (TAIR:AT2G39640.1); Has 2877 Blast hits to 2804 proteins in 154 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 42; Plants - 2822; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (p52409|e13b_wheat : 387.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 257.0) no description available & (reliability: 910.0) & (original description: Putative gns2, Description = Beta-1,3 glucanase, PFAM = PF07983;PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf05767_379140-383329' '(at3g15800 : 480.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT2G26600.1); Has 2147 Blast hits to 2134 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 2137; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|84700 : 292.0) no description available & (p52409|e13b_wheat : 226.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 960.0) & (original description: Putative Glc2, Description = Beta-1,3-glucanase, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf05918_257-4996' '(at3g23770 : 555.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G14080.1); Has 2823 Blast hits to 2749 proteins in 147 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 32; Plants - 2780; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|84700 : 327.0) no description available & (p52409|e13b_wheat : 245.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1110.0) & (original description: Putative A6, Description = Probable glucan endo-1,3-beta-glucosidase A6, PFAM = PF07983;PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf06461_162199-168786' '(at5g58090 : 688.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84700 : 229.0) no description available & (p52409|e13b_wheat : 200.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1376.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF07983;PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf06826_594757-600011' '(at3g24330 : 288.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 2751 Blast hits to 2684 proteins in 166 species: Archae - 0; Bacteria - 16; Metazoa - 4; Fungi - 44; Plants - 2678; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 193.0) no description available & (p23433|e13d_tobac : 147.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Nicotiana tabacum (Common tobacco) & (reliability: 576.0) & (original description: Putative PGSC0003DMG400014912, Description = Putative glucan endo-1,3-beta-glucosidase 8-like, PFAM = PF00332;PF07983)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf07048_112248-117045' '(at2g19440 : 650.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT1G64760.2); Has 2685 Blast hits to 2621 proteins in 154 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 44; Plants - 2618; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|84700 : 222.0) no description available & (p52409|e13b_wheat : 194.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1300.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 8, PFAM = PF07983;PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf07196_163983-167645' '(p23547|e13g_tobac : 405.0) Glucan endo-1,3-beta-glucosidase, acidic isoform GI9 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PR-2B) (PR-36) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84700 : 375.0) no description available & (at4g16260 : 311.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1 (TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5; Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 622.0) & (original description: Putative PR2, Description = Glucan endo-1,3-beta-glucosidase, acidic isoform GI9, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf07284_282563-288566' '(at2g27500 : 472.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT1G32860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84700 : 294.0) no description available & (p52409|e13b_wheat : 254.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 944.0) & (original description: Putative At2g27500, Description = Glucan endo-1,3-beta-glucosidase 14, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf07304_129990-134830' '(at5g20870 : 600.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 2792 Blast hits to 2718 proteins in 160 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 51; Plants - 2724; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|84700 : 234.0) no description available & (q03773|e13a_soybn : 206.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Glycine max (Soybean) & (reliability: 1140.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF00332;PF07983)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf07805_91782-96914' '(at1g64760 : 679.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT2G19440.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84700 : 227.0) no description available & (p52409|e13b_wheat : 196.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1358.0) & (original description: Putative bgl, Description = Beta-1,3-glucanase, acidic, PFAM = PF07983;PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf07939_150866-155266' '(at5g58090 : 701.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84700 : 225.0) no description available & (p52409|e13b_wheat : 201.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1402.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF00332;PF07983)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf08111_191950-199075' '(at2g01630 : 660.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT1G66250.1); Has 2147 Blast hits to 2131 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 5; Plants - 2133; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|84700 : 275.0) no description available & (p52409|e13b_wheat : 241.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1320.0) & (original description: Putative At2g01630, Description = Glucan endo-1,3-beta-glucosidase 3, PFAM = PF07983;PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf08465_430530-436200' '(at1g66250 : 655.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT2G01630.1); Has 2879 Blast hits to 2803 proteins in 166 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 66; Plants - 2798; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|84700 : 265.0) no description available & (p52409|e13b_wheat : 233.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1310.0) & (original description: Putative B13G_1, Description = Beta-1,3-glucanase 1, PFAM = PF07983;PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf08504_290174-293738' '(gnl|cdd|84700 : 366.0) no description available & (p23547|e13g_tobac : 363.0) Glucan endo-1,3-beta-glucosidase, acidic isoform GI9 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PR-2B) (PR-36) - Nicotiana tabacum (Common tobacco) & (at4g16260 : 266.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1 (TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5; Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 532.0) & (original description: Putative GGL4, Description = Glucan endo-1,3-beta-glucosidase, acidic isoform GL153, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf08819_42090-46184' '(at1g32860 : 468.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase_putative (TAIR:AT5G42100.1); Has 2148 Blast hits to 2131 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 2; Plants - 2133; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|84700 : 282.0) no description available & (p52409|e13b_wheat : 248.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 936.0) & (original description: Putative At1g32860, Description = Glucan endo-1,3-beta-glucosidase 11, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf08941_1-3253' '(p23547|e13g_tobac : 404.0) Glucan endo-1,3-beta-glucosidase, acidic isoform GI9 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PR-2B) (PR-36) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84700 : 393.0) no description available & (at4g16260 : 322.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1 (TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5; Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 644.0) & (original description: Putative PR2, Description = Glucan endo-1,3-beta-glucosidase, acidic isoform GI9, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf09846_238004-241759' '(at3g07320 : 608.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G23770.1); Has 2806 Blast hits to 2728 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 5; Plants - 2791; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|84700 : 301.0) no description available & (p52409|e13b_wheat : 264.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1216.0) & (original description: Putative A6, Description = Probable glucan endo-1,3-beta-glucosidase A6, PFAM = PF00332;PF07983)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf13833_263078-266780' '(at5g24318 : 457.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G55430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p52409|e13b_wheat : 405.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 260.0) no description available & (reliability: 914.0) & (original description: Putative gns2, Description = Beta-1,3 glucanase, PFAM = PF00332;PF07983)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf14799_111258-116575' '(p07979|gub_nicpl : 629.0) Lichenase precursor (EC 3.2.1.73) (Endo-beta-1,3-1,4 glucanase) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|84700 : 470.0) no description available & (at4g16260 : 398.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1 (TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5; Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 796.0) & (original description: Putative GN1, Description = Lichenase, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf16079_3158-10660' '(p23547|e13g_tobac : 408.0) Glucan endo-1,3-beta-glucosidase, acidic isoform GI9 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PR-2B) (PR-36) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84700 : 402.0) no description available & (at4g16260 : 313.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1 (TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5; Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 626.0) & (original description: Putative bgl, Description = Beta-1,3-glucanase, PFAM = PF00332)' T '26.4.1' 'misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase' 'niben101scf18669_17238-20995' '(at5g64790 : 279.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p52409|e13b_wheat : 154.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (gnl|cdd|84700 : 136.0) no description available & (reliability: 540.0) & (original description: Putative PGSC0003DMG400014912, Description = Putative glucan endo-1,3-beta-glucosidase 8-like, PFAM = PF07983;PF00332)' T '26.5' 'misc.acyl transferases' 'nbv0.3scaffold9260_41659-51196' '(at1g80410 : 442.0) EMBRYO DEFECTIVE 2753 (EMB2753); FUNCTIONS IN: binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), N-terminal acetyltransferase A, auxiliary subunit (InterPro:IPR021183), Tetratricopeptide repeat (InterPro:IPR019734). & (gnl|cdd|36371 : 328.0) no description available & (reliability: 884.0) & (original description: Putative naa15, Description = N-alpha-acetyltransferase 15, NatA auxiliary subunit, PFAM = PF13414;PF12569)' T '26.5' 'misc.acyl transferases' 'nbv0.3scaffold16475_13-10795' '(at1g80410 : 619.0) EMBRYO DEFECTIVE 2753 (EMB2753); FUNCTIONS IN: binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), N-terminal acetyltransferase A, auxiliary subunit (InterPro:IPR021183), Tetratricopeptide repeat (InterPro:IPR019734). & (gnl|cdd|36371 : 382.0) no description available & (reliability: 1238.0) & (original description: Putative NAA16, Description = N-alpha-acetyltransferase, NatA auxiliary subunit, PFAM = PF12569)' T '26.5' 'misc.acyl transferases' 'nbv0.3scaffold32627_13000-21744' '(at3g02030 : 423.0) transferases, transferring acyl groups other than amino-acyl groups;acyltransferases; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acyltransferase activity; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41130.1); Has 598 Blast hits to 587 proteins in 168 species: Archae - 0; Bacteria - 374; Metazoa - 27; Fungi - 2; Plants - 145; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 792.0) & (original description: Putative At1g54570, Description = Esterase/lipase/thioesterase family protein, PFAM = PF12146;PF03982)' T '26.5' 'misc.acyl transferases' 'nbv0.3scaffold101984_318-3797' '(at1g80410 : 160.0) EMBRYO DEFECTIVE 2753 (EMB2753); FUNCTIONS IN: binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), N-terminal acetyltransferase A, auxiliary subunit (InterPro:IPR021183), Tetratricopeptide repeat (InterPro:IPR019734). & (gnl|cdd|36371 : 94.6) no description available & (reliability: 320.0) & (original description: Putative pco068905, Description = N-terminal acetyltransferase A, auxiliary subunit, PFAM = PF12569)' T '26.5' 'misc.acyl transferases' 'nbv0.5scaffold620_43221-74156' '(at1g80410 : 1212.0) EMBRYO DEFECTIVE 2753 (EMB2753); FUNCTIONS IN: binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), N-terminal acetyltransferase A, auxiliary subunit (InterPro:IPR021183), Tetratricopeptide repeat (InterPro:IPR019734). & (gnl|cdd|36371 : 794.0) no description available & (reliability: 2424.0) & (original description: Putative Naa16, Description = N-alpha-acetyltransferase 16, NatA auxiliary subunit, PFAM = PF12569;PF13414)' T '26.5' 'misc.acyl transferases' 'nbv0.5scaffold4844_14294-26446' '(at4g01130 : 504.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G26430.1); Has 3308 Blast hits to 3260 proteins in 151 species: Archae - 0; Bacteria - 130; Metazoa - 0; Fungi - 52; Plants - 3122; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|58514 : 295.0) no description available & (q7y1x1|est_hevbr : 282.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 1008.0) & (original description: Putative ache, Description = GDSL esterase/lipase, PFAM = PF00657)' T '26.5' 'misc.acyl transferases' 'niben044scf00004043ctg010_1773-9371' '(at2g34410 : 806.0) O-acetyltransferase family protein; FUNCTIONS IN: O-acetyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT1G29890.2). & (gnl|cdd|36912 : 487.0) no description available & (gnl|cdd|71219 : 290.0) no description available & (reliability: 1612.0) & (original description: Putative CASD1, Description = CAS1 domain-containing protein 1, PFAM = PF07779)' T '26.5' 'misc.acyl transferases' 'niben101scf00109_212200-227863' '(at5g41130 : 700.0) Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41120.1). & (reliability: 1308.0) & (original description: Putative At3g26840, Description = Acyltransferase-like protein At3g26840, chloroplastic, PFAM = PF12146;PF03982)' T '26.5' 'misc.acyl transferases' 'niben101scf00447_313015-325579' '(at4g01130 : 506.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G26430.1); Has 3308 Blast hits to 3260 proteins in 151 species: Archae - 0; Bacteria - 130; Metazoa - 0; Fungi - 52; Plants - 3122; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|58514 : 295.0) no description available & (q7y1x1|est_hevbr : 280.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 1012.0) & (original description: Putative ache, Description = GDSL esterase/lipase, PFAM = PF00657)' T '26.5' 'misc.acyl transferases' 'niben101scf00607_268095-283366' '(at1g29890 : 794.0) O-acetyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT2G34410.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36912 : 476.0) no description available & (gnl|cdd|71219 : 278.0) no description available & (reliability: 1568.0) & (original description: Putative RWA1, Description = Protein REDUCED WALL ACETYLATION 1, PFAM = PF07779;PF07779)' T '26.5' 'misc.acyl transferases' 'niben101scf01990_35165-40161' '(at4g01130 : 500.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G26430.1); Has 3308 Blast hits to 3260 proteins in 151 species: Archae - 0; Bacteria - 130; Metazoa - 0; Fungi - 52; Plants - 3122; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|58514 : 292.0) no description available & (q7y1x1|est_hevbr : 274.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 1000.0) & (original description: Putative ache, Description = GDSL-like lipase/acylhydrolase, PFAM = PF00657)' T '26.5' 'misc.acyl transferases' 'niben101scf03280_129256-144027' '(at1g78690 : 374.0) Phospholipid/glycerol acyltransferase family protein; FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123), Tafazzin (InterPro:IPR000872); BEST Arabidopsis thaliana protein match is: Phospholipid/glycerol acyltransferase family protein (TAIR:AT3G05510.2); Has 1059 Blast hits to 1041 proteins in 400 species: Archae - 0; Bacteria - 447; Metazoa - 249; Fungi - 138; Plants - 116; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (gnl|cdd|38058 : 280.0) no description available & (gnl|cdd|47863 : 80.8) no description available & (reliability: 748.0) & (original description: Putative taz, Description = Tafazzin, PFAM = PF01553)' T '26.5' 'misc.acyl transferases' 'niben101scf04881_154049-162204' '(at2g34410 : 808.0) O-acetyltransferase family protein; FUNCTIONS IN: O-acetyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT1G29890.2). & (gnl|cdd|36912 : 486.0) no description available & (gnl|cdd|71219 : 289.0) no description available & (reliability: 1616.0) & (original description: Putative RWA3, Description = Protein REDUCED WALL ACETYLATION 3, PFAM = PF07779)' T '26.5' 'misc.acyl transferases' 'niben101scf05828_46088-74038' '(at1g80410 : 1214.0) EMBRYO DEFECTIVE 2753 (EMB2753); FUNCTIONS IN: binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), N-terminal acetyltransferase A, auxiliary subunit (InterPro:IPR021183), Tetratricopeptide repeat (InterPro:IPR019734). & (gnl|cdd|36371 : 799.0) no description available & (reliability: 2428.0) & (original description: Putative NAA16, Description = N-alpha-acetyltransferase 16, NatA auxiliary subunit, PFAM = PF12569;PF13414)' T '26.5' 'misc.acyl transferases' 'niben101scf06077_422202-429881' '(at3g51520 : 414.0) diacylglycerol acyltransferase family; FUNCTIONS IN: diacylglycerol O-acyltransferase activity, transferase activity, transferring acyl groups other than amino-acyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130); Has 1280 Blast hits to 1264 proteins in 273 species: Archae - 0; Bacteria - 248; Metazoa - 568; Fungi - 161; Plants - 127; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|36049 : 255.0) no description available & (gnl|cdd|86505 : 254.0) no description available & (reliability: 828.0) & (original description: Putative DGAT2, Description = Diacylglycerol O-acyltransferase 2, PFAM = PF03982)' T '26.5' 'misc.acyl transferases' 'niben101scf07184_556580-566939' '(at3g06550 : 770.0) O-acetyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT2G34410.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36912 : 488.0) no description available & (gnl|cdd|71219 : 294.0) no description available & (reliability: 1486.0) & (original description: Putative RWA2, Description = Protein REDUCED WALL ACETYLATION 2, PFAM = PF07779)' T '26.5' 'misc.acyl transferases' 'niben101scf08121_35785-59628' '(at1g80410 : 1218.0) EMBRYO DEFECTIVE 2753 (EMB2753); FUNCTIONS IN: binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), N-terminal acetyltransferase A, auxiliary subunit (InterPro:IPR021183), Tetratricopeptide repeat (InterPro:IPR019734). & (gnl|cdd|36371 : 787.0) no description available & (reliability: 2436.0) & (original description: Putative Naa16, Description = N-alpha-acetyltransferase 16, NatA auxiliary subunit, PFAM = PF13414;PF12569)' T '26.5' 'misc.acyl transferases' 'niben101scf18348_144886-152568' '(at1g80950 : 505.0) Phospholipid/glycerol acyltransferase family protein; FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endoplasmic reticulum, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: calcineurin B subunit-related (TAIR:AT2G45670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39865 : 350.0) no description available & (gnl|cdd|47863 : 82.3) no description available & (reliability: 1010.0) & (original description: Putative LPEAT1, Description = Lysophospholipid acyltransferase LPEAT1, PFAM = PF01553)' T '26.5' 'misc.acyl transferases' 'niben101scf35412_80420-85772' '(at1g65450 : 542.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G41040.1). & (gnl|cdd|66174 : 341.0) no description available & (o23917|hcbt2_diaca : 163.0) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1084.0) & (original description: Putative hct-D, Description = Hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase, PFAM = PF02458)' T '26.6' 'misc.O-methyl transferases' 'nbv0.3scaffold14244_829-6035' '(at4g31790 : 460.0) Tetrapyrrole (Corrin/Porphyrin) Methylases; FUNCTIONS IN: methyltransferase activity, diphthine synthase activity; INVOLVED IN: peptidyl-diphthamide biosynthetic process from peptidyl-histidine, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diphthine synthase (InterPro:IPR004551), Tetrapyrrole methylase (InterPro:IPR000878), Tetrapyrrole methylase, subdomain 1 (InterPro:IPR014777), Tetrapyrrole methylase, subdomain 2 (InterPro:IPR014776); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38333 : 431.0) no description available & (gnl|cdd|31983 : 294.0) no description available & (reliability: 920.0) & (original description: Putative dph5, Description = Diphthine synthase, PFAM = PF00590)' T '26.6' 'misc.O-methyl transferases' 'nbv0.3scaffold24477_2325-11206' '(gnl|cdd|85101 : 235.0) no description available & (o24529|7omt8_medsa : 177.0) Isoflavone-7-O-methyltransferase 8 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 8) (7-IOMT-8) - Medicago sativa (Alfalfa) & (gnl|cdd|38388 : 151.0) no description available & (at4g35160 : 114.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative oomtA, Description = O-methyltransferase, putative, PFAM = PF00891)' T '26.6' 'misc.O-methyl transferases' 'nbv0.3scaffold45937_4673-10552' '(at4g29510 : 553.0) Has arginine N-methyltransferase activity. Modifies AtMBD7.; arginine methyltransferase 11 (PRMT11); FUNCTIONS IN: protein-arginine N-methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2778 Blast hits to 2730 proteins in 659 species: Archae - 61; Bacteria - 655; Metazoa - 1180; Fungi - 241; Plants - 326; Viruses - 1; Other Eukaryotes - 314 (source: NCBI BLink). & (gnl|cdd|36712 : 464.0) no description available & (reliability: 1106.0) & (original description: Putative PRMT1, Description = Probable protein arginine N-methyltransferase 1, PFAM = PF06325)' T '26.6' 'misc.O-methyl transferases' 'nbv0.3scaffold45937_5062-8600' '(at4g29510 : 306.0) Has arginine N-methyltransferase activity. Modifies AtMBD7.; arginine methyltransferase 11 (PRMT11); FUNCTIONS IN: protein-arginine N-methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2778 Blast hits to 2730 proteins in 659 species: Archae - 61; Bacteria - 655; Metazoa - 1180; Fungi - 241; Plants - 326; Viruses - 1; Other Eukaryotes - 314 (source: NCBI BLink). & (gnl|cdd|36712 : 225.0) no description available & (reliability: 612.0) & (original description: Putative PRMT1, Description = Chromosome undetermined SCAF7678, whole genome shotgun sequence, PFAM = )' T '26.6' 'misc.O-methyl transferases' 'nbv0.5scaffold634_445717-457021' '(at4g29510 : 569.0) Has arginine N-methyltransferase activity. Modifies AtMBD7.; arginine methyltransferase 11 (PRMT11); FUNCTIONS IN: protein-arginine N-methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2778 Blast hits to 2730 proteins in 659 species: Archae - 61; Bacteria - 655; Metazoa - 1180; Fungi - 241; Plants - 326; Viruses - 1; Other Eukaryotes - 314 (source: NCBI BLink). & (gnl|cdd|36712 : 472.0) no description available & (reliability: 1138.0) & (original description: Putative PRMT11, Description = Protein arginine N-methyltransferase 1.1, PFAM = PF06325)' T '26.6' 'misc.O-methyl transferases' 'nbv0.5scaffold2269_221068-234099' '(at3g06930 : 644.0) Encodes an type I protein arginine methyltransferase. PRMT4b can catalyze the asymmetric dimethylation of arginines 2,17, and 26 on histone 3 and can also methylate myelin basic protein in vitro. Double mutants lacking PRMT4a and 4b have reduced levels of histone 3 methylated at R17. These double mutants flower late due to defects in the autonomous pathway and they have elevated levels of FLC transcripts.; protein arginine methyltransferase 4B (PRMT4B); CONTAINS InterPro DOMAIN/s: Skb1 methyltransferase (InterPro:IPR007857); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 4A (TAIR:AT5G49020.1); Has 2741 Blast hits to 2716 proteins in 617 species: Archae - 50; Bacteria - 577; Metazoa - 1204; Fungi - 251; Plants - 344; Viruses - 1; Other Eukaryotes - 314 (source: NCBI BLink). & (gnl|cdd|36713 : 575.0) no description available & (reliability: 1288.0) & (original description: Putative CARM1, Description = Probable histone-arginine methyltransferase CARM1, PFAM = PF06325)' T '26.6' 'misc.O-methyl transferases' 'nbv0.5scaffold5748_8622-18585' '(at3g20020 : 400.0) protein arginine methyltransferase 6 (PRMT6); FUNCTIONS IN: protein methyltransferase activity, methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2687 Blast hits to 2666 proteins in 709 species: Archae - 44; Bacteria - 791; Metazoa - 996; Fungi - 246; Plants - 285; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). & (gnl|cdd|36712 : 223.0) no description available & (reliability: 800.0) & (original description: Putative prmt6, Description = Protein arginine methyltransferase 6, PFAM = )' T '26.6' 'misc.O-methyl transferases' 'niben044scf00003304ctg031_4311-8972' '(at4g29510 : 469.0) Has arginine N-methyltransferase activity. Modifies AtMBD7.; arginine methyltransferase 11 (PRMT11); FUNCTIONS IN: protein-arginine N-methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2778 Blast hits to 2730 proteins in 659 species: Archae - 61; Bacteria - 655; Metazoa - 1180; Fungi - 241; Plants - 326; Viruses - 1; Other Eukaryotes - 314 (source: NCBI BLink). & (gnl|cdd|36712 : 377.0) no description available & (reliability: 938.0) & (original description: Putative PRMT11, Description = Protein arginine N-methyltransferase 1.1, PFAM = PF06325)' T '26.6' 'misc.O-methyl transferases' 'niben044scf00004043ctg010_1773-9371' '(at2g34410 : 806.0) O-acetyltransferase family protein; FUNCTIONS IN: O-acetyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT1G29890.2). & (gnl|cdd|36912 : 487.0) no description available & (gnl|cdd|71219 : 290.0) no description available & (reliability: 1512.0) & (original description: Putative CASD1, Description = CAS1 domain-containing protein 1, PFAM = PF07779)' T '26.6' 'misc.O-methyl transferases' 'niben044scf00028585ctg005_5784-9772' '(at5g42760 : 424.0) Leucine carboxyl methyltransferase; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00027, methylltransferase (InterPro:IPR011610), Leucine carboxyl methyltransferase (InterPro:IPR007213). & (gnl|cdd|33124 : 117.0) no description available & (reliability: 848.0) & (original description: Putative Sb01g006610, Description = Putative uncharacterized protein Sb01g006610, PFAM = PF04072)' T '26.6' 'misc.O-methyl transferases' 'niben044scf00029902ctg002_1943-12444' '(at3g20020 : 405.0) protein arginine methyltransferase 6 (PRMT6); FUNCTIONS IN: protein methyltransferase activity, methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2687 Blast hits to 2666 proteins in 709 species: Archae - 44; Bacteria - 791; Metazoa - 996; Fungi - 246; Plants - 285; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). & (gnl|cdd|36712 : 254.0) no description available & (reliability: 810.0) & (original description: Putative prmt6, Description = Protein arginine methyltransferase 6, PFAM = PF06325)' T '26.6' 'misc.O-methyl transferases' 'niben044scf00041723ctg001_9153-15782' '(at4g29510 : 457.0) Has arginine N-methyltransferase activity. Modifies AtMBD7.; arginine methyltransferase 11 (PRMT11); FUNCTIONS IN: protein-arginine N-methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2778 Blast hits to 2730 proteins in 659 species: Archae - 61; Bacteria - 655; Metazoa - 1180; Fungi - 241; Plants - 326; Viruses - 1; Other Eukaryotes - 314 (source: NCBI BLink). & (gnl|cdd|36712 : 394.0) no description available & (reliability: 914.0) & (original description: Putative prmt1, Description = Protein arginine methyltransferase, PFAM = PF06325)' T '26.6' 'misc.O-methyl transferases' 'niben044scf00061114ctg000_2585-5211' '(at3g12270 : 120.0) protein arginine methyltransferase 3 (PRMT3); FUNCTIONS IN: protein methyltransferase activity, methyltransferase activity, zinc ion binding; INVOLVED IN: protein amino acid methylation; LOCATED IN: intracellular, cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 6 (TAIR:AT3G20020.1); Has 3110 Blast hits to 3077 proteins in 726 species: Archae - 48; Bacteria - 800; Metazoa - 1243; Fungi - 266; Plants - 328; Viruses - 0; Other Eukaryotes - 425 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative PRMT3, Description = Putative arginine N-methyltransferase 3-like protein, PFAM = )' T '26.6' 'misc.O-methyl transferases' 'niben044scf00061779ctg000_59-3959' '(gnl|cdd|86349 : 282.0) no description available & (at1g15125 : 263.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G68040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9fyz9|bamt_antma : 163.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 526.0) & (original description: Putative LAMT, Description = Putative loganic acid O-methyltransferase, PFAM = PF03492)' T '26.6' 'misc.O-methyl transferases' 'niben101scf00055_377656-386123' '(at5g42760 : 434.0) Leucine carboxyl methyltransferase; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00027, methylltransferase (InterPro:IPR011610), Leucine carboxyl methyltransferase (InterPro:IPR007213). & (gnl|cdd|33124 : 110.0) no description available & (reliability: 868.0) & (original description: Putative BnaA06g37060D, Description = BnaA06g37060D protein, PFAM = PF04072)' T '26.6' 'misc.O-methyl transferases' 'niben101scf00152_2533765-2540909' '(at4g31790 : 466.0) Tetrapyrrole (Corrin/Porphyrin) Methylases; FUNCTIONS IN: methyltransferase activity, diphthine synthase activity; INVOLVED IN: peptidyl-diphthamide biosynthetic process from peptidyl-histidine, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diphthine synthase (InterPro:IPR004551), Tetrapyrrole methylase (InterPro:IPR000878), Tetrapyrrole methylase, subdomain 1 (InterPro:IPR014777), Tetrapyrrole methylase, subdomain 2 (InterPro:IPR014776); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38333 : 438.0) no description available & (gnl|cdd|31983 : 303.0) no description available & (reliability: 932.0) & (original description: Putative dph5, Description = Diphthine synthase, PFAM = PF00590)' T '26.6' 'misc.O-methyl transferases' 'niben101scf00502_34999-47564' '(at3g20020 : 394.0) protein arginine methyltransferase 6 (PRMT6); FUNCTIONS IN: protein methyltransferase activity, methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2687 Blast hits to 2666 proteins in 709 species: Archae - 44; Bacteria - 791; Metazoa - 996; Fungi - 246; Plants - 285; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). & (gnl|cdd|36712 : 220.0) no description available & (reliability: 788.0) & (original description: Putative prmt6, Description = Protein arginine methyltransferase 6, PFAM = )' T '26.6' 'misc.O-methyl transferases' 'niben101scf00607_268095-283366' '(at1g29890 : 794.0) O-acetyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT2G34410.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36912 : 476.0) no description available & (gnl|cdd|71219 : 278.0) no description available & (reliability: 1588.0) & (original description: Putative RWA1, Description = Protein REDUCED WALL ACETYLATION 1, PFAM = PF07779;PF07779)' T '26.6' 'misc.O-methyl transferases' 'niben101scf00927_274221-277870' '(gnl|cdd|86349 : 291.0) no description available & (at1g68040 : 231.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G38100.1); Has 919 Blast hits to 907 proteins in 124 species: Archae - 0; Bacteria - 69; Metazoa - 11; Fungi - 5; Plants - 720; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (q9fyz9|bamt_antma : 110.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 450.0) & (original description: Putative LAMT, Description = Putative loganic acid O-methyltransferase, PFAM = PF03492)' T '26.6' 'misc.O-methyl transferases' 'niben101scf01184_1756068-1759203' '(gnl|cdd|85101 : 251.0) no description available & (o22308|7omt6_medsa : 205.0) Isoflavone-7-O-methyltransferase 6 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 6) (7-IOMT-6) - Medicago sativa (Alfalfa) & (gnl|cdd|38388 : 168.0) no description available & (at4g35160 : 128.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative oomtA, Description = O-methyltransferase, putative, PFAM = PF00891)' T '26.6' 'misc.O-methyl transferases' 'niben101scf02073_71666-75201' '(o22308|7omt6_medsa : 270.0) Isoflavone-7-O-methyltransferase 6 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 6) (7-IOMT-6) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 235.0) no description available & (gnl|cdd|38388 : 173.0) no description available & (at4g35160 : 163.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative oomtA, Description = O-methyltransferase, putative, PFAM = PF08100;PF00891)' T '26.6' 'misc.O-methyl transferases' 'niben101scf02114_58079-61712' '(gnl|cdd|86349 : 328.0) no description available & (at1g68040 : 301.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G38100.1); Has 919 Blast hits to 907 proteins in 124 species: Archae - 0; Bacteria - 69; Metazoa - 11; Fungi - 5; Plants - 720; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (q9fyz9|bamt_antma : 161.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 568.0) & (original description: Putative At5g38100, Description = Probable S-adenosylmethionine-dependent methyltransferase At5g38100, PFAM = PF03492)' T '26.6' 'misc.O-methyl transferases' 'niben101scf02736_149256-158938' '(at4g16570 : 806.0) protein arginine methyltransferase 7 (PRMT7); FUNCTIONS IN: methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein arginine N-methyltransferase (InterPro:IPR014644); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 4A (TAIR:AT5G49020.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36714 : 369.0) no description available & (reliability: 1612.0) & (original description: Putative PRMT16, Description = Protein arginine N-methyltransferase 1.6, PFAM = )' T '26.6' 'misc.O-methyl transferases' 'niben101scf02816_710769-716588' '(at4g29510 : 570.0) Has arginine N-methyltransferase activity. Modifies AtMBD7.; arginine methyltransferase 11 (PRMT11); FUNCTIONS IN: protein-arginine N-methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2778 Blast hits to 2730 proteins in 659 species: Archae - 61; Bacteria - 655; Metazoa - 1180; Fungi - 241; Plants - 326; Viruses - 1; Other Eukaryotes - 314 (source: NCBI BLink). & (gnl|cdd|36712 : 479.0) no description available & (reliability: 1140.0) & (original description: Putative PRMT1, Description = Probable protein arginine N-methyltransferase 1, PFAM = PF06325)' T '26.6' 'misc.O-methyl transferases' 'niben101scf02828_30893-35119' '(gnl|cdd|86349 : 317.0) no description available & (at1g15125 : 298.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G68040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9fyz9|bamt_antma : 183.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 596.0) & (original description: Putative At5g38780, Description = Probable S-adenosylmethionine-dependent methyltransferase At5g38780, PFAM = PF03492)' T '26.6' 'misc.O-methyl transferases' 'niben101scf03129_293094-304502' '(at3g06930 : 687.0) Encodes an type I protein arginine methyltransferase. PRMT4b can catalyze the asymmetric dimethylation of arginines 2,17, and 26 on histone 3 and can also methylate myelin basic protein in vitro. Double mutants lacking PRMT4a and 4b have reduced levels of histone 3 methylated at R17. These double mutants flower late due to defects in the autonomous pathway and they have elevated levels of FLC transcripts.; protein arginine methyltransferase 4B (PRMT4B); CONTAINS InterPro DOMAIN/s: Skb1 methyltransferase (InterPro:IPR007857); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 4A (TAIR:AT5G49020.1); Has 2741 Blast hits to 2716 proteins in 617 species: Archae - 50; Bacteria - 577; Metazoa - 1204; Fungi - 251; Plants - 344; Viruses - 1; Other Eukaryotes - 314 (source: NCBI BLink). & (gnl|cdd|36713 : 610.0) no description available & (reliability: 1374.0) & (original description: Putative PRMT13, Description = Probable histone-arginine methyltransferase 1.3, PFAM = PF06325)' T '26.6' 'misc.O-methyl transferases' 'niben101scf04103_702228-719997' '(at1g04870 : 543.0) Encodes a type I protein arginine methyltransferase based on the At1g04870.2 gene model. PRMT10 can catalyze the asymmetric dimethylation of arginine 3 on histone 4 and can also methylate myelin basic protein in vitro. Mutants lacking PRMT10 flower late due to defects in the autonomous pathway and they have elevated levels of FLC transcripts.; protein arginine methyltransferase 10 (PRMT10); FUNCTIONS IN: histone-arginine N-methyltransferase activity, methyltransferase activity, protein-arginine omega-N asymmetric methyltransferase activity, [myelin basic protein]-arginine N-methyltransferase activity, protein-arginine omega-N monomethyltransferase activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, peptidyl-arginine methylation, to asymmetrical-dimethyl arginine; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Skb1 methyltransferase (InterPro:IPR007857); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 6 (TAIR:AT3G20020.1); Has 3346 Blast hits to 3335 proteins in 890 species: Archae - 50; Bacteria - 1167; Metazoa - 1181; Fungi - 251; Plants - 354; Viruses - 1; Other Eukaryotes - 342 (source: NCBI BLink). & (gnl|cdd|36712 : 338.0) no description available & (reliability: 1086.0) & (original description: Putative PRMT10, Description = Protein arginine N-methyltransferase PRMT10, PFAM = PF06325)' T '26.6' 'misc.O-methyl transferases' 'niben101scf04610_604431-608190' '(at5g42760 : 427.0) Leucine carboxyl methyltransferase; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00027, methylltransferase (InterPro:IPR011610), Leucine carboxyl methyltransferase (InterPro:IPR007213). & (gnl|cdd|33124 : 120.0) no description available & (reliability: 854.0) & (original description: Putative BnaA06g37060D, Description = BnaA06g37060D protein, PFAM = PF04072)' T '26.6' 'misc.O-methyl transferases' 'niben101scf04719_82534-101315' '(at3g20020 : 568.0) protein arginine methyltransferase 6 (PRMT6); FUNCTIONS IN: protein methyltransferase activity, methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2687 Blast hits to 2666 proteins in 709 species: Archae - 44; Bacteria - 791; Metazoa - 996; Fungi - 246; Plants - 285; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). & (gnl|cdd|36712 : 377.0) no description available & (reliability: 1136.0) & (original description: Putative PRMT6, Description = Probable protein arginine N-methyltransferase 6, PFAM = PF06325)' T '26.6' 'misc.O-methyl transferases' 'niben101scf04881_154049-162204' '(at2g34410 : 808.0) O-acetyltransferase family protein; FUNCTIONS IN: O-acetyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT1G29890.2). & (gnl|cdd|36912 : 486.0) no description available & (gnl|cdd|71219 : 289.0) no description available & (reliability: 1516.0) & (original description: Putative RWA3, Description = Protein REDUCED WALL ACETYLATION 3, PFAM = PF07779)' T '26.6' 'misc.O-methyl transferases' 'niben101scf05231_155528-169969' '(at3g06930 : 677.0) Encodes an type I protein arginine methyltransferase. PRMT4b can catalyze the asymmetric dimethylation of arginines 2,17, and 26 on histone 3 and can also methylate myelin basic protein in vitro. Double mutants lacking PRMT4a and 4b have reduced levels of histone 3 methylated at R17. These double mutants flower late due to defects in the autonomous pathway and they have elevated levels of FLC transcripts.; protein arginine methyltransferase 4B (PRMT4B); CONTAINS InterPro DOMAIN/s: Skb1 methyltransferase (InterPro:IPR007857); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 4A (TAIR:AT5G49020.1); Has 2741 Blast hits to 2716 proteins in 617 species: Archae - 50; Bacteria - 577; Metazoa - 1204; Fungi - 251; Plants - 344; Viruses - 1; Other Eukaryotes - 314 (source: NCBI BLink). & (gnl|cdd|36713 : 617.0) no description available & (reliability: 1354.0) & (original description: Putative CARM1, Description = Probable histone-arginine methyltransferase CARM1, PFAM = PF06325)' T '26.6' 'misc.O-methyl transferases' 'niben101scf05449_242432-250525' '(at4g29510 : 530.0) Has arginine N-methyltransferase activity. Modifies AtMBD7.; arginine methyltransferase 11 (PRMT11); FUNCTIONS IN: protein-arginine N-methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2778 Blast hits to 2730 proteins in 659 species: Archae - 61; Bacteria - 655; Metazoa - 1180; Fungi - 241; Plants - 326; Viruses - 1; Other Eukaryotes - 314 (source: NCBI BLink). & (gnl|cdd|36712 : 434.0) no description available & (reliability: 1060.0) & (original description: Putative PRMT11, Description = Protein arginine N-methyltransferase 1.1, PFAM = PF06325)' T '26.6' 'misc.O-methyl transferases' 'niben101scf05487_241690-247543' '(at1g69523 : 291.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G69526.2); Has 8414 Blast hits to 8405 proteins in 1811 species: Archae - 286; Bacteria - 5877; Metazoa - 213; Fungi - 292; Plants - 233; Viruses - 0; Other Eukaryotes - 1513 (source: NCBI BLink). & (gnl|cdd|39501 : 198.0) no description available & (gnl|cdd|87468 : 88.1) no description available & (reliability: 582.0) & (original description: Putative At1g69523, Description = At1g69520/F10D13_17, PFAM = PF08241)' T '26.6' 'misc.O-methyl transferases' 'niben101scf06061_111343-129229' '(at3g53140 : 517.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, protein dimerization activity, O-methyltransferase activity; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase 1 (TAIR:AT5G54160.1); Has 3047 Blast hits to 3042 proteins in 532 species: Archae - 0; Bacteria - 810; Metazoa - 98; Fungi - 512; Plants - 1526; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (gnl|cdd|38388 : 299.0) no description available & (q8w013|comt1_catro : 249.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|85101 : 217.0) no description available & (reliability: 1034.0) & (original description: Putative omt, Description = O-diphenol-O-methyl transferase, PFAM = PF00891)' T '26.6' 'misc.O-methyl transferases' 'niben101scf06105_475835-478970' '(o24529|7omt8_medsa : 186.0) Isoflavone-7-O-methyltransferase 8 (EC 2.1.1.150) (Isoflavone-O-methyltransferase 8) (7-IOMT-8) - Medicago sativa (Alfalfa) & (gnl|cdd|85101 : 154.0) no description available & (gnl|cdd|38388 : 125.0) no description available & (at4g35160 : 113.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative oomtA, Description = O-methyltransferase, putative, PFAM = PF00891;PF00891;PF08100)' T '26.6' 'misc.O-methyl transferases' 'niben101scf07184_556580-566939' '(at3g06550 : 770.0) O-acetyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT2G34410.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36912 : 488.0) no description available & (gnl|cdd|71219 : 294.0) no description available & (reliability: 1418.0) & (original description: Putative RWA2, Description = Protein REDUCED WALL ACETYLATION 2, PFAM = PF07779)' T '26.6' 'misc.O-methyl transferases' 'niben101scf10431_80076-88389' '(at3g12270 : 555.0) protein arginine methyltransferase 3 (PRMT3); FUNCTIONS IN: protein methyltransferase activity, methyltransferase activity, zinc ion binding; INVOLVED IN: protein amino acid methylation; LOCATED IN: intracellular, cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 6 (TAIR:AT3G20020.1); Has 3110 Blast hits to 3077 proteins in 726 species: Archae - 48; Bacteria - 800; Metazoa - 1243; Fungi - 266; Plants - 328; Viruses - 0; Other Eukaryotes - 425 (source: NCBI BLink). & (gnl|cdd|36712 : 313.0) no description available & (reliability: 1110.0) & (original description: Putative PRMT3, Description = Probable protein arginine N-methyltransferase 3, PFAM = PF12756;PF13649)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold4045_13222-17672' '(at1g62830 : 965.0) Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation.; LSD1-like 1 (LDL1); CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), SWIRM (InterPro:IPR007526); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family protein (TAIR:AT3G10390.1); Has 6747 Blast hits to 5826 proteins in 999 species: Archae - 53; Bacteria - 2706; Metazoa - 1658; Fungi - 565; Plants - 779; Viruses - 0; Other Eukaryotes - 986 (source: NCBI BLink). & (gnl|cdd|35252 : 459.0) no description available & (gnl|cdd|85554 : 249.0) no description available & (o64411|pao_maize : 118.0) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (reliability: 1930.0) & (original description: Putative LDL1, Description = Lysine-specific histone demethylase 1 homolog 1, PFAM = PF01593;PF04433)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold5076_4742-8617' '(q8h0m1|qorh_spiol : 384.0) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) & (at4g13010 : 374.0) Oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT1G23740.1); Has 34133 Blast hits to 33976 proteins in 2527 species: Archae - 549; Bacteria - 21108; Metazoa - 1143; Fungi - 3531; Plants - 1393; Viruses - 3; Other Eukaryotes - 6406 (source: NCBI BLink). & (gnl|cdd|36412 : 200.0) no description available & (gnl|cdd|30949 : 174.0) no description available & (reliability: 748.0) & (original description: Putative At4g13010, Description = Putative quinone-oxidoreductase homolog, chloroplastic, PFAM = PF13602;PF08240)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold5199_59636-64294' '(at3g13682 : 970.0) Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering loci FLC and FWA.; LSD1-like2 (LDL2); CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), SWIRM (InterPro:IPR007526); BEST Arabidopsis thaliana protein match is: LSD1-like 1 (TAIR:AT1G62830.1); Has 5703 Blast hits to 5142 proteins in 914 species: Archae - 48; Bacteria - 2121; Metazoa - 1514; Fungi - 564; Plants - 617; Viruses - 0; Other Eukaryotes - 839 (source: NCBI BLink). & (gnl|cdd|35252 : 465.0) no description available & (gnl|cdd|85554 : 244.0) no description available & (o64411|pao_maize : 105.0) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (reliability: 1940.0) & (original description: Putative LDL2, Description = Lysine-specific histone demethylase 1 homolog 2, PFAM = PF04433;PF01593)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold5512_44199-50120' '(at4g38540 : 357.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT5G05320.1); Has 5392 Blast hits to 5382 proteins in 1070 species: Archae - 48; Bacteria - 3093; Metazoa - 5; Fungi - 1172; Plants - 539; Viruses - 0; Other Eukaryotes - 535 (source: NCBI BLink). & (gnl|cdd|37825 : 273.0) no description available & (gnl|cdd|30999 : 134.0) no description available & (reliability: 714.0) & (original description: Putative MO2, Description = FAD/NAD(P)-binding oxidoreductase family protein, PFAM = PF01494)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold6606_39668-46306' '(gnl|cdd|35365 : 241.0) no description available & (at4g10490 : 167.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: secondary metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10500.1); Has 8582 Blast hits to 8537 proteins in 997 species: Archae - 0; Bacteria - 1099; Metazoa - 117; Fungi - 945; Plants - 4980; Viruses - 0; Other Eukaryotes - 1441 (source: NCBI BLink). & (gnl|cdd|33294 : 163.0) no description available & (q05964|fl3h_diaca : 138.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 324.0) & (original description: Putative F3H2, Description = F3H2 protein, PFAM = PF14226;PF03171)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold7078_52430-57477' '(at1g76160 : 792.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 613.0) no description available & (q00624|aso_brana : 556.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 146.0) no description available & (reliability: 1544.0) & (original description: Putative sks4, Description = L-ascorbate oxidase-like protein, PFAM = PF07731;PF00394;PF07732)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold11469_1-15368' '(at2g17970 : 281.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G36090.2). & (gnl|cdd|39378 : 161.0) no description available & (reliability: 562.0) & (original description: Putative At1g48980, Description = Putative ovule protein, PFAM = PF13532)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold19794_22488-28392' '(at3g10390 : 993.0) Encodes a plant homolog of a SWIRM domain containing protein found in histone deacetylase complexes in mammals. Lesions in FLD result in hyperacetylation of histones in FLC chromatin, up-regulation of FLC expression and extremely delayed flowering. FLD plays a key role in regulating the reproductive competence of the shoot and results in different developmental phase transitions in Arabidopsis.; FLOWERING LOCUS D (FLD); FUNCTIONS IN: primary amine oxidase activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, positive regulation of flower development, histone deacetylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), SWIRM (InterPro:IPR007526); BEST Arabidopsis thaliana protein match is: LSD1-like 1 (TAIR:AT1G62830.1); Has 6633 Blast hits to 6189 proteins in 1142 species: Archae - 35; Bacteria - 2778; Metazoa - 1469; Fungi - 560; Plants - 667; Viruses - 0; Other Eukaryotes - 1124 (source: NCBI BLink). & (gnl|cdd|35252 : 465.0) no description available & (gnl|cdd|85554 : 257.0) no description available & (o64411|pao_maize : 94.4) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (reliability: 1986.0) & (original description: Putative HDMA1501, Description = SWIRM domain protein, PFAM = PF01593;PF04433)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold25159_1320-9287' '(at1g21850 : 303.0) SKU5 similar 8 (sks8); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 7 (TAIR:AT1G21860.1); Has 5145 Blast hits to 5091 proteins in 951 species: Archae - 16; Bacteria - 1604; Metazoa - 263; Fungi - 1857; Plants - 1262; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|36477 : 288.0) no description available & (q00624|aso_brana : 262.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 103.0) no description available & (reliability: 606.0) & (original description: Putative glysoja_017008, Description = Monocopper oxidase-like protein SKU5, PFAM = PF07732;PF07731;PF00394)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold30130_3305-20715' '(at4g12290 : 993.0) Copper amine oxidase family protein; FUNCTIONS IN: quinone binding, primary amine oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2-terminal (InterPro:IPR015800), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT1G62810.1); Has 1550 Blast hits to 1547 proteins in 275 species: Archae - 14; Bacteria - 376; Metazoa - 251; Fungi - 449; Plants - 243; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|36400 : 814.0) no description available & (gnl|cdd|85290 : 585.0) no description available & (q43077|amo_pea : 520.0) Amine oxidase [copper-containing] precursor (EC 1.4.3.6) - Pisum sativum (Garden pea) & (reliability: 1986.0) & (original description: Putative cuAO, Description = Amine oxidase, PFAM = PF02728;PF02727;PF01179)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold31914_3419-8477' '(at1g23740 : 408.0) Oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to cold; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Quinone oxidoreductase/zeta-crystallin, conserved site (InterPro:IPR002364), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT4G13010.1); Has 40144 Blast hits to 39997 proteins in 2741 species: Archae - 622; Bacteria - 25898; Metazoa - 1494; Fungi - 3833; Plants - 1284; Viruses - 3; Other Eukaryotes - 7010 (source: NCBI BLink). & (gnl|cdd|30949 : 215.0) no description available & (gnl|cdd|36412 : 203.0) no description available & (q8h0m1|qorh_spiol : 85.5) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) & (reliability: 816.0) & (original description: Putative EO, Description = 2-methylene-furan-3-one reductase, PFAM = PF08240;PF13602)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold66182_4664-7001' '(at1g19250 : 91.7) FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites.; flavin-dependent monooxygenase 1 (FMO1); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: stem, leaf whorl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Dimethylaniline monooxygenase, N-oxide-forming (InterPro:IPR012143), Flavin-containing amine oxidase (InterPro:IPR001613), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G45180.1); Has 7639 Blast hits to 7432 proteins in 837 species: Archae - 6; Bacteria - 3396; Metazoa - 753; Fungi - 1311; Plants - 833; Viruses - 0; Other Eukaryotes - 1340 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative uaz122, Description = Flavin-containing monooxygenase, PFAM = )' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold76668_3930-7831' '(p29162|ntp3_tobac : 564.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (at1g55570 : 542.0) SKU5 similar 12 (sks12); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 11 (TAIR:AT3G13390.1); Has 5441 Blast hits to 5412 proteins in 1035 species: Archae - 18; Bacteria - 1816; Metazoa - 269; Fungi - 1918; Plants - 1254; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|36477 : 436.0) no description available & (gnl|cdd|87357 : 150.0) no description available & (reliability: 1084.0) & (original description: Putative p303, Description = L-ascorbate oxidase-like protein, PFAM = PF07732;PF00394;PF07731)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold79774_3477-7200' '(at2g42490 : 336.0) Copper amine oxidase family protein; FUNCTIONS IN: quinone binding, primary amine oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT3G43670.1); Has 1554 Blast hits to 1550 proteins in 277 species: Archae - 14; Bacteria - 379; Metazoa - 243; Fungi - 461; Plants - 232; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|83851 : 143.0) no description available & (gnl|cdd|36400 : 122.0) no description available & (reliability: 672.0) & (original description: Putative CuAO, Description = Amine oxidase, PFAM = PF02728;PF02727)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold83237_1770-6555' '(at2g42490 : 382.0) Copper amine oxidase family protein; FUNCTIONS IN: quinone binding, primary amine oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT3G43670.1); Has 1554 Blast hits to 1550 proteins in 277 species: Archae - 14; Bacteria - 379; Metazoa - 243; Fungi - 461; Plants - 232; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|83851 : 280.0) no description available & (gnl|cdd|36400 : 245.0) no description available & (q43077|amo_pea : 97.4) Amine oxidase [copper-containing] precursor (EC 1.4.3.6) - Pisum sativum (Garden pea) & (reliability: 764.0) & (original description: Putative 1D11, Description = Amine oxidase, PFAM = PF01179)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold141794_1-1261' '(at2g42490 : 517.0) Copper amine oxidase family protein; FUNCTIONS IN: quinone binding, primary amine oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT3G43670.1); Has 1554 Blast hits to 1550 proteins in 277 species: Archae - 14; Bacteria - 379; Metazoa - 243; Fungi - 461; Plants - 232; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|83851 : 352.0) no description available & (gnl|cdd|36400 : 296.0) no description available & (q43077|amo_pea : 129.0) Amine oxidase [copper-containing] precursor (EC 1.4.3.6) - Pisum sativum (Garden pea) & (reliability: 1034.0) & (original description: Putative amx2, Description = Amine oxidase, PFAM = PF01179)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.3scaffold176543_1-672' '(at4g16310 : 263.0) LSD1-like 3 (LDL3); FUNCTIONS IN: primary amine oxidase activity; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Adrenodoxin reductase (InterPro:IPR000759), SWIRM (InterPro:IPR007526); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family protein (TAIR:AT3G10390.1); Has 1823 Blast hits to 1718 proteins in 423 species: Archae - 23; Bacteria - 1184; Metazoa - 118; Fungi - 119; Plants - 329; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative AOF2, Description = Polyamine oxidase, PFAM = PF01593)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold308_30760-42797' '(at1g48910 : 271.0) YUC10; FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: regulation of anatomical structure morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT1G21430.1); Has 10747 Blast hits to 10734 proteins in 1402 species: Archae - 41; Bacteria - 5770; Metazoa - 759; Fungi - 1564; Plants - 638; Viruses - 0; Other Eukaryotes - 1975 (source: NCBI BLink). & (gnl|cdd|36613 : 132.0) no description available & (gnl|cdd|32255 : 102.0) no description available & (reliability: 542.0) & (original description: Putative yuc, Description = Flavin-containing monooxygenase, PFAM = PF00743)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold449_451429-455272' '(at1g31710 : 497.0) Copper amine oxidase family protein; FUNCTIONS IN: primary amine oxidase activity, quinone binding, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2-terminal (InterPro:IPR015800), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT1G31690.1); Has 1551 Blast hits to 1547 proteins in 275 species: Archae - 14; Bacteria - 376; Metazoa - 251; Fungi - 449; Plants - 247; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|36400 : 484.0) no description available & (q43077|amo_pea : 457.0) Amine oxidase [copper-containing] precursor (EC 1.4.3.6) - Pisum sativum (Garden pea) & (gnl|cdd|85290 : 324.0) no description available & (reliability: 994.0) & (original description: Putative cuAO, Description = Amine oxidase, PFAM = PF02728;PF01179)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold1009_59342-63186' '(at5g25620 : 440.0) YUCCA6 (YUC6); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: auxin biosynthetic process; EXPRESSED IN: sepal; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT4G13260.1). & (gnl|cdd|36613 : 236.0) no description available & (gnl|cdd|32255 : 161.0) no description available & (reliability: 880.0) & (original description: Putative fzy, Description = Flavin-containing monooxygenase, PFAM = PF13738)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold1502_84413-95849' '(gnl|cdd|36410 : 186.0) no description available & (gnl|cdd|32313 : 177.0) no description available & (at5g16970 : 152.0) encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls; alkenal reductase (AER); FUNCTIONS IN: 2-alkenal reductase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G17000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative ppdbr, Description = NADP-dependent alkenal double bond reductase, PFAM = PF00107)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold1919_232393-262577' '(at2g43080 : 436.0) Encodes a prolyl-4 hydroxylase that can hydroxylate poly(L-proline),the collagen model peptide (Pro-Pro-Gly)10 and other proline rich peptides.; P4H isoform 1 (AT-P4H-1); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, procollagen-proline 4-dioxygenase activity; INVOLVED IN: peptidyl-proline hydroxylation to 4-hydroxy-L-proline; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G20270.1); Has 2440 Blast hits to 2431 proteins in 340 species: Archae - 0; Bacteria - 392; Metazoa - 982; Fungi - 96; Plants - 404; Viruses - 14; Other Eukaryotes - 552 (source: NCBI BLink). & (gnl|cdd|36804 : 238.0) no description available & (gnl|cdd|47971 : 152.0) no description available & (reliability: 872.0) & (original description: Putative P4H1, Description = Prolyl 4-hydroxylase 1, PFAM = PF13640)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold1919_247034-262201' '(at2g43080 : 117.0) Encodes a prolyl-4 hydroxylase that can hydroxylate poly(L-proline),the collagen model peptide (Pro-Pro-Gly)10 and other proline rich peptides.; P4H isoform 1 (AT-P4H-1); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, procollagen-proline 4-dioxygenase activity; INVOLVED IN: peptidyl-proline hydroxylation to 4-hydroxy-L-proline; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G20270.1); Has 2440 Blast hits to 2431 proteins in 340 species: Archae - 0; Bacteria - 392; Metazoa - 982; Fungi - 96; Plants - 404; Viruses - 14; Other Eukaryotes - 552 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative MFL8, Description = Prolyl 4-hydroxylase subunit alpha-1, PFAM = )' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold2112_156350-182553' '(at5g06580 : 441.0) Encodes a protein with glycolate dehydrogenase activity, which was shown to complement various subunits of the E. coli glycolate oxidase complex. It has not been ruled out that the enzyme might be involved in other catalytic activities in vivo.; FAD-linked oxidases family protein; FUNCTIONS IN: glycolate oxidase activity, glycolate dehydrogenase activity, D-lactate dehydrogenase (cytochrome) activity, ATP binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), FAD-linked oxidase, C-terminal (InterPro:IPR004113), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094), FAD-binding, type 2, subdomain 1 (InterPro:IPR016167); BEST Arabidopsis thaliana protein match is: FAD-linked oxidases family protein (TAIR:AT4G36400.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36445 : 243.0) no description available & (gnl|cdd|86181 : 198.0) no description available & (reliability: 882.0) & (original description: Putative dld, Description = 2-hydroxy-acid oxidase, PFAM = PF02913)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold2201_122171-142074' '(at4g16310 : 1343.0) LSD1-like 3 (LDL3); FUNCTIONS IN: primary amine oxidase activity; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Adrenodoxin reductase (InterPro:IPR000759), SWIRM (InterPro:IPR007526); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family protein (TAIR:AT3G10390.1); Has 1823 Blast hits to 1718 proteins in 423 species: Archae - 23; Bacteria - 1184; Metazoa - 118; Fungi - 119; Plants - 329; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|35252 : 413.0) no description available & (gnl|cdd|85554 : 279.0) no description available & (o64411|pao_maize : 95.1) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (reliability: 2686.0) & (original description: Putative HDMA1503, Description = Amino_oxidase domain protein, PFAM = PF04433;PF01593)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold2573_133721-139654' '(at5g05320 : 360.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT4G38540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37825 : 279.0) no description available & (gnl|cdd|30999 : 146.0) no description available & (reliability: 720.0) & (original description: Putative MO2, Description = FAD/NAD(P)-binding oxidoreductase family protein, PFAM = PF01266;PF01494)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold5789_81094-89896' '(at2g42490 : 1163.0) Copper amine oxidase family protein; FUNCTIONS IN: quinone binding, primary amine oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT3G43670.1); Has 1554 Blast hits to 1550 proteins in 277 species: Archae - 14; Bacteria - 379; Metazoa - 243; Fungi - 461; Plants - 232; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|83851 : 720.0) no description available & (gnl|cdd|36400 : 607.0) no description available & (q43077|amo_pea : 216.0) Amine oxidase [copper-containing] precursor (EC 1.4.3.6) - Pisum sativum (Garden pea) & (reliability: 2326.0) & (original description: Putative tynA, Description = Amine oxidase, PFAM = PF01179;PF01179;PF02728)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold6548_16934-20798' '(gnl|cdd|66026 : 117.0) no description available & (at5g20230 : 94.7) Al-stress-induced gene; blue-copper-binding protein (BCB); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to oxidative stress, response to salt stress, aluminum ion transport, response to wounding, response to absence of light; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G72230.1); Has 2817 Blast hits to 1998 proteins in 202 species: Archae - 2; Bacteria - 847; Metazoa - 51; Fungi - 106; Plants - 1463; Viruses - 11; Other Eukaryotes - 337 (source: NCBI BLink). & (q41001|bcp_pea : 93.6) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 180.2) & (original description: Putative phy, Description = Blue copper protein, PFAM = PF02298;PF02298)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold7931_14672-19797' '(p29162|ntp3_tobac : 724.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (at1g55570 : 681.0) SKU5 similar 12 (sks12); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 11 (TAIR:AT3G13390.1); Has 5441 Blast hits to 5412 proteins in 1035 species: Archae - 18; Bacteria - 1816; Metazoa - 269; Fungi - 1918; Plants - 1254; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|36477 : 532.0) no description available & (gnl|cdd|87357 : 150.0) no description available & (reliability: 1362.0) & (original description: Putative p303, Description = L-ascorbate oxidase-like protein, PFAM = PF07732;PF07731;PF00394)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold8950_6791-26727' '(at1g19250 : 389.0) FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites.; flavin-dependent monooxygenase 1 (FMO1); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: stem, leaf whorl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Dimethylaniline monooxygenase, N-oxide-forming (InterPro:IPR012143), Flavin-containing amine oxidase (InterPro:IPR001613), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G45180.1); Has 7639 Blast hits to 7432 proteins in 837 species: Archae - 6; Bacteria - 3396; Metazoa - 753; Fungi - 1311; Plants - 833; Viruses - 0; Other Eukaryotes - 1340 (source: NCBI BLink). & (gnl|cdd|84997 : 180.0) no description available & (gnl|cdd|36613 : 170.0) no description available & (reliability: 778.0) & (original description: Putative FMO1, Description = Probable flavin-containing monooxygenase 1, PFAM = PF00743)' T '26.7' 'misc.oxidases - copper, flavone etc' 'nbv0.5scaffold9005_17811-21892' '(at1g04610 : 619.0) YUCCA 3 (YUC3); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: auxin biosynthetic process; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: YUCCA 7 (TAIR:AT2G33230.1); Has 9657 Blast hits to 9637 proteins in 1196 species: Archae - 33; Bacteria - 4899; Metazoa - 784; Fungi - 1494; Plants - 670; Viruses - 0; Other Eukaryotes - 1777 (source: NCBI BLink). & (gnl|cdd|36613 : 305.0) no description available & (gnl|cdd|32255 : 191.0) no description available & (reliability: 1238.0) & (original description: Putative YUC3, Description = Probable indole-3-pyruvate monooxygenase YUCCA3, PFAM = PF00743)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00000615ctg015_6406-10264' '(at1g48910 : 404.0) YUC10; FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: regulation of anatomical structure morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT1G21430.1); Has 10747 Blast hits to 10734 proteins in 1402 species: Archae - 41; Bacteria - 5770; Metazoa - 759; Fungi - 1564; Plants - 638; Viruses - 0; Other Eukaryotes - 1975 (source: NCBI BLink). & (gnl|cdd|36613 : 219.0) no description available & (gnl|cdd|32255 : 172.0) no description available & (reliability: 808.0) & (original description: Putative YUC10, Description = Probable indole-3-pyruvate monooxygenase YUCCA10, PFAM = PF13738)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00002392ctg004_622-6605' '(gnl|cdd|36477 : 472.0) no description available & (at4g12420 : 461.0) Encodes a protein of unknown function involved in directed root tip growth. It is a member of 19-member gene family and is distantly related structurally to the multiple-copper oxidases ascorbate oxidase and laccase, though it lacks the copper-binding domains. The protein is glycosylated and GPI-anchored. It is localized to the plasma membrane and the cell wall. The gene is expressed most strongly in expanding tissues.; SKU5; FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: cell tip growth; LOCATED IN: plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 2 (TAIR:AT5G51480.1). & (q00624|aso_brana : 399.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 134.0) no description available & (reliability: 884.0) & (original description: Putative sks3, Description = Multi-copper oxidase-like protein, PFAM = PF07731;PF07732;PF00394)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00003294ctg015_1114-4657' '(at5g06580 : 236.0) Encodes a protein with glycolate dehydrogenase activity, which was shown to complement various subunits of the E. coli glycolate oxidase complex. It has not been ruled out that the enzyme might be involved in other catalytic activities in vivo.; FAD-linked oxidases family protein; FUNCTIONS IN: glycolate oxidase activity, glycolate dehydrogenase activity, D-lactate dehydrogenase (cytochrome) activity, ATP binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), FAD-linked oxidase, C-terminal (InterPro:IPR004113), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094), FAD-binding, type 2, subdomain 1 (InterPro:IPR016167); BEST Arabidopsis thaliana protein match is: FAD-linked oxidases family protein (TAIR:AT4G36400.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36445 : 147.0) no description available & (gnl|cdd|86181 : 133.0) no description available & (reliability: 472.0) & (original description: Putative dld, Description = 2-hydroxy-acid oxidase, PFAM = PF02913)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00004686ctg002_3492-6699' '(at5g45180 : 168.0) Flavin-binding monooxygenase family protein; FUNCTIONS IN: NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: flavin-dependent monooxygenase 1 (TAIR:AT1G19250.1); Has 7331 Blast hits to 7212 proteins in 844 species: Archae - 6; Bacteria - 3308; Metazoa - 739; Fungi - 1235; Plants - 732; Viruses - 0; Other Eukaryotes - 1311 (source: NCBI BLink). & (gnl|cdd|36613 : 151.0) no description available & (gnl|cdd|32255 : 114.0) no description available & (reliability: 336.0) & (original description: Putative PGSC0003DMG400018659, Description = Flavin-containing monooxygenase, PFAM = PF00743)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00005280ctg002_321-8288' '(at1g21850 : 291.0) SKU5 similar 8 (sks8); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 7 (TAIR:AT1G21860.1); Has 5145 Blast hits to 5091 proteins in 951 species: Archae - 16; Bacteria - 1604; Metazoa - 263; Fungi - 1857; Plants - 1262; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|36477 : 278.0) no description available & (q00624|aso_brana : 258.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 102.0) no description available & (reliability: 582.0) & (original description: Putative glysoja_017008, Description = Monocopper oxidase-like protein SKU5, PFAM = PF07732;PF00394;PF07731)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00005280ctg002_1192-8562' '(gnl|cdd|36477 : 443.0) no description available & (at5g48450 : 439.0) Encodes a protein with two DUF26 domains and a signal peptide for secretion. The protein is transported to the apoplast when it is expressed as a GFP fusion protein.; SKU5 similar 3 (sks3); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT4G12420.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q00624|aso_brana : 395.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 130.0) no description available & (reliability: 872.0) & (original description: Putative sks3, Description = Multi-copper oxidase-like protein, PFAM = PF07731;PF07732;PF00394)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00009820ctg007_6029-13654' '(at1g24340 : 892.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 2421 (EMB2421); FUNCTIONS IN: monooxygenase activity; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); Has 5711 Blast hits to 5585 proteins in 1112 species: Archae - 4; Bacteria - 3878; Metazoa - 19; Fungi - 944; Plants - 66; Viruses - 0; Other Eukaryotes - 800 (source: NCBI BLink). & (gnl|cdd|75374 : 266.0) no description available & (gnl|cdd|39059 : 214.0) no description available & (reliability: 1784.0) & (original description: Putative EMB2421, Description = FAD/NAD(P)-binding oxidoreductase family protein, PFAM = PF01494)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00010150ctg016_8418-14556' '(gnl|cdd|35365 : 275.0) no description available & (at2g36690 : 209.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G60290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33294 : 180.0) no description available & (p51091|ldox_maldo : 154.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 418.0) & (original description: Putative DLO2, Description = Protein DMR6-LIKE OXYGENASE 2, PFAM = PF03171;PF14226)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00011556ctg005_10147-14063' '(at1g48910 : 180.0) YUC10; FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: regulation of anatomical structure morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT1G21430.1); Has 10747 Blast hits to 10734 proteins in 1402 species: Archae - 41; Bacteria - 5770; Metazoa - 759; Fungi - 1564; Plants - 638; Viruses - 0; Other Eukaryotes - 1975 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative spi1, Description = Flavin-containing monooxygenase, PFAM = PF00743)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00011556ctg010_4695-7342' '(at1g48910 : 248.0) YUC10; FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: regulation of anatomical structure morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT1G21430.1); Has 10747 Blast hits to 10734 proteins in 1402 species: Archae - 41; Bacteria - 5770; Metazoa - 759; Fungi - 1564; Plants - 638; Viruses - 0; Other Eukaryotes - 1975 (source: NCBI BLink). & (gnl|cdd|36613 : 178.0) no description available & (gnl|cdd|32255 : 164.0) no description available & (reliability: 496.0) & (original description: Putative yuc, Description = Flavin-containing monooxygenase, PFAM = PF13738)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00013594ctg000_1-4683' '(at5g54830 : 1165.0) DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein; FUNCTIONS IN: dopamine beta-monooxygenase activity, monooxygenase activity; INVOLVED IN: histidine catabolic process, metabolic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Electron transfer DM13 (InterPro:IPR019545), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593), DOMON (InterPro:IPR013050); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane with DOMON related domain (TAIR:AT3G61750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39929 : 353.0) no description available & (gnl|cdd|47940 : 114.0) no description available & (reliability: 2330.0) & (original description: Putative At5g54830, Description = Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830, PFAM = PF03188;PF10517;PF03351;PF03351)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00016768ctg006_431-4294' '(p29162|ntp3_tobac : 1068.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (at1g55570 : 767.0) SKU5 similar 12 (sks12); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 11 (TAIR:AT3G13390.1); Has 5441 Blast hits to 5412 proteins in 1035 species: Archae - 18; Bacteria - 1816; Metazoa - 269; Fungi - 1918; Plants - 1254; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|36477 : 575.0) no description available & (gnl|cdd|87357 : 149.0) no description available & (reliability: 1534.0) & (original description: Putative p303, Description = L-ascorbate oxidase-like protein, PFAM = PF07732;PF07731;PF00394)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00018840ctg002_1-861' '(at2g43020 : 183.0) polyamine oxidase 2 (PAO2); FUNCTIONS IN: primary amine oxidase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Flavin-containing amine oxidase (InterPro:IPR001613); BEST Arabidopsis thaliana protein match is: polyamine oxidase 3 (TAIR:AT3G59050.1); Has 6381 Blast hits to 5960 proteins in 1057 species: Archae - 96; Bacteria - 2371; Metazoa - 1412; Fungi - 575; Plants - 752; Viruses - 0; Other Eukaryotes - 1175 (source: NCBI BLink). & (gnl|cdd|35252 : 95.8) no description available & (reliability: 366.0) & (original description: Putative PAO2, Description = Putative polyamine oxidase 4, PFAM = PF01593)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00020337ctg011_21062-24757' '(at1g14130 : 357.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G14120.1); Has 6919 Blast hits to 6851 proteins in 822 species: Archae - 0; Bacteria - 798; Metazoa - 89; Fungi - 567; Plants - 4661; Viruses - 0; Other Eukaryotes - 804 (source: NCBI BLink). & (gnl|cdd|35365 : 231.0) no description available & (gnl|cdd|33294 : 123.0) no description available & (q40634|acco1_orysa : 114.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) - Oryza sativa (Rice) & (reliability: 714.0) & (original description: Putative DAO, Description = 2-oxoglutarate-dependent dioxygenase DAO, PFAM = PF14226;PF03171)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00022329ctg000_1-5625' '(at5g06580 : 270.0) Encodes a protein with glycolate dehydrogenase activity, which was shown to complement various subunits of the E. coli glycolate oxidase complex. It has not been ruled out that the enzyme might be involved in other catalytic activities in vivo.; FAD-linked oxidases family protein; FUNCTIONS IN: glycolate oxidase activity, glycolate dehydrogenase activity, D-lactate dehydrogenase (cytochrome) activity, ATP binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), FAD-linked oxidase, C-terminal (InterPro:IPR004113), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094), FAD-binding, type 2, subdomain 1 (InterPro:IPR016167); BEST Arabidopsis thaliana protein match is: FAD-linked oxidases family protein (TAIR:AT4G36400.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30625 : 117.0) no description available & (gnl|cdd|36445 : 110.0) no description available & (reliability: 540.0) & (original description: Putative dld, Description = D-Lactate dehydrogenase, cytochrome c-dependent, PFAM = PF01565)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00028198ctg002_6646-12271' '(at1g76160 : 819.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 617.0) no description available & (p29162|ntp3_tobac : 580.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84744 : 144.0) no description available & (reliability: 1570.0) & (original description: Putative sks5, Description = AT1G76160 protein, PFAM = PF07731;PF07732;PF00394)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00029134ctg009_1-2436' '(at1g04610 : 527.0) YUCCA 3 (YUC3); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: auxin biosynthetic process; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: YUCCA 7 (TAIR:AT2G33230.1); Has 9657 Blast hits to 9637 proteins in 1196 species: Archae - 33; Bacteria - 4899; Metazoa - 784; Fungi - 1494; Plants - 670; Viruses - 0; Other Eukaryotes - 1777 (source: NCBI BLink). & (gnl|cdd|36613 : 274.0) no description available & (gnl|cdd|32255 : 196.0) no description available & (reliability: 1054.0) & (original description: Putative YUC9, Description = Probable indole-3-pyruvate monooxygenase YUCCA9, PFAM = PF00743)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00041131ctg005_486-6516' '(at1g23010 : 772.0) Encodes a protein with multicopper oxidase activity. Located in ER. Function together with LPR2 (AT1G71040) and a P5-type ATPase (At5g23630/PDR2) in a common pathway that adjusts root meristem activity to Pi (inorganic phosphate) availability.; Low Phosphate Root1 (LPR1); CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G71040.1); Has 3143 Blast hits to 2693 proteins in 814 species: Archae - 12; Bacteria - 2669; Metazoa - 8; Fungi - 64; Plants - 261; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|32315 : 141.0) no description available & (reliability: 1544.0) & (original description: Putative LPR1, Description = Multicopper oxidase LPR1, PFAM = PF00394;PF07732;PF07731)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00044368ctg001_1-4763' '(at5g18900 : 346.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123), Metridin-like ShK toxin (InterPro:IPR003582); BEST Arabidopsis thaliana protein match is: P4H isoform 2 (TAIR:AT3G06300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36804 : 192.0) no description available & (gnl|cdd|47971 : 118.0) no description available & (reliability: 692.0) & (original description: Putative P4H1, Description = Prolyl 4-hydroxylase subunit alpha-1, PFAM = PF13640)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00045302ctg003_3950-7742' '(p29162|ntp3_tobac : 942.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (at1g55560 : 760.0) SKU5 similar 14 (sks14); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 13 (TAIR:AT3G13400.1); Has 5179 Blast hits to 5121 proteins in 953 species: Archae - 12; Bacteria - 1596; Metazoa - 272; Fungi - 1874; Plants - 1269; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (gnl|cdd|36477 : 579.0) no description available & (gnl|cdd|87357 : 145.0) no description available & (reliability: 1520.0) & (original description: Putative p303, Description = 1-ascorbate oxidase, PFAM = PF07731;PF07732;PF00394)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben044scf00050397ctg002_576-6761' '(at3g24200 : 141.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: FAD binding, monooxygenase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen; INVOLVED IN: oxidation reduction, ubiquinone biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 (InterPro:IPR010971), Monooxygenase, FAD-binding (InterPro:IPR002938), Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site (InterPro:IPR018168); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative COQ6, Description = Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial, PFAM = )' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101ctg15851_2247-5335' '(at5g16990 : 358.0) molecular function has not been defined, was shown involved in oxidative stress tolerance.; Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36410 : 349.0) no description available & (gnl|cdd|32313 : 243.0) no description available & (reliability: 716.0) & (original description: Putative ADH3, Description = Putative NADP-dependent oxidoreductase P1, PFAM = PF00107)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf00083_434030-439220' '(at5g66060 : 424.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, iron ion binding, L-ascorbic acid binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G20270.1). & (gnl|cdd|36804 : 278.0) no description available & (gnl|cdd|47971 : 158.0) no description available & (reliability: 848.0) & (original description: Putative P4H10, Description = Probable prolyl 4-hydroxylase 10, PFAM = PF13640)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf00152_923984-939461' '(at4g16310 : 1363.0) LSD1-like 3 (LDL3); FUNCTIONS IN: primary amine oxidase activity; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Adrenodoxin reductase (InterPro:IPR000759), SWIRM (InterPro:IPR007526); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family protein (TAIR:AT3G10390.1); Has 1823 Blast hits to 1718 proteins in 423 species: Archae - 23; Bacteria - 1184; Metazoa - 118; Fungi - 119; Plants - 329; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|35252 : 414.0) no description available & (gnl|cdd|85554 : 278.0) no description available & (o64411|pao_maize : 94.4) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (reliability: 2726.0) & (original description: Putative LDL3, Description = Lysine-specific histone demethylase 1 homolog 3, PFAM = PF04433;PF01593)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf00238_1134877-1142518' '(gnl|cdd|35365 : 305.0) no description available & (at3g60290 : 238.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to karrikin, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G44800.1); Has 8462 Blast hits to 8411 proteins in 989 species: Archae - 0; Bacteria - 1081; Metazoa - 111; Fungi - 1027; Plants - 4887; Viruses - 0; Other Eukaryotes - 1356 (source: NCBI BLink). & (q06942|fl3h_maldo : 195.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 162.0) no description available & (reliability: 452.0) & (original description: Putative DMR6, Description = Protein DOWNY MILDEW RESISTANCE 6, PFAM = PF03171;PF14226)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf00422_189563-193441' '(at4g29720 : 556.0) polyamine oxidase 5 (PAO5); FUNCTIONS IN: primary amine oxidase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: LSD1-like 3 (TAIR:AT4G16310.1); Has 3107 Blast hits to 2713 proteins in 458 species: Archae - 2; Bacteria - 686; Metazoa - 1027; Fungi - 508; Plants - 550; Viruses - 0; Other Eukaryotes - 334 (source: NCBI BLink). & (gnl|cdd|35904 : 373.0) no description available & (gnl|cdd|85554 : 197.0) no description available & (reliability: 1112.0) & (original description: Putative PAO4, Description = Putative polyamine oxidase 5, PFAM = PF01593)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf00428_1250748-1254655' '(at2g35660 : 522.0) Encodes a member of a novel gene family with homology to known proteins involved in hydroxylation and oxidation of an aromatic ring.; CTF2A; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT2G29720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37825 : 364.0) no description available & (gnl|cdd|30999 : 177.0) no description available & (q40412|aba2_nicpl : 87.8) Zeaxanthin epoxidase, chloroplast precursor (EC 1.14.13.90) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1044.0) & (original description: Putative CTF2A, Description = CTF2A like oxidoreductase, PFAM = PF01494)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf00461_472498-476087' '(at4g29720 : 556.0) polyamine oxidase 5 (PAO5); FUNCTIONS IN: primary amine oxidase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: LSD1-like 3 (TAIR:AT4G16310.1); Has 3107 Blast hits to 2713 proteins in 458 species: Archae - 2; Bacteria - 686; Metazoa - 1027; Fungi - 508; Plants - 550; Viruses - 0; Other Eukaryotes - 334 (source: NCBI BLink). & (gnl|cdd|35904 : 387.0) no description available & (gnl|cdd|85554 : 208.0) no description available & (reliability: 1112.0) & (original description: Putative PAO5, Description = Probable polyamine oxidase 5, PFAM = PF01593)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf00539_590033-597295' '(at1g20270 : 436.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G66060.1); Has 2479 Blast hits to 2467 proteins in 338 species: Archae - 0; Bacteria - 393; Metazoa - 997; Fungi - 73; Plants - 409; Viruses - 15; Other Eukaryotes - 592 (source: NCBI BLink). & (gnl|cdd|36804 : 278.0) no description available & (gnl|cdd|47971 : 159.0) no description available & (reliability: 872.0) & (original description: Putative P4H3, Description = Probable prolyl 4-hydroxylase 3, PFAM = PF13640)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf00751_335415-364025' '(at5g16970 : 182.0) encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls; alkenal reductase (AER); FUNCTIONS IN: 2-alkenal reductase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G17000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36410 : 179.0) no description available & (gnl|cdd|32313 : 109.0) no description available & (reliability: 364.0) & (original description: Putative ADH3, Description = NADP-dependent alkenal double bond reductase, PFAM = PF16884)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf00792_73387-92038' '(gnl|cdd|36477 : 301.0) no description available & (at5g66920 : 289.0) SKU5 similar 17 (sks17); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: response to karrikin; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 15 (TAIR:AT4G37160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q00624|aso_brana : 259.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 104.0) no description available & (reliability: 578.0) & (original description: Putative BnaA07g12260D, Description = Monocopper oxidase-like protein SKU5, PFAM = PF00394;PF07731;PF07732)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf00803_90942-95245' '(at5g67290 : 462.0) FAD-dependent oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38063 : 365.0) no description available & (gnl|cdd|31009 : 142.0) no description available & (reliability: 924.0) & (original description: Putative At5g67290, Description = FAD-dependent oxidoreductase-like protein, PFAM = PF01266)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf00863_784814-788889' '(at1g55570 : 785.0) SKU5 similar 12 (sks12); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 11 (TAIR:AT3G13390.1); Has 5441 Blast hits to 5412 proteins in 1035 species: Archae - 18; Bacteria - 1816; Metazoa - 269; Fungi - 1918; Plants - 1254; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (p29162|ntp3_tobac : 780.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36477 : 568.0) no description available & (gnl|cdd|87357 : 143.0) no description available & (reliability: 1570.0) & (original description: Putative p303, Description = L-ascorbate oxidase-like protein, PFAM = PF00394;PF07732;PF07731)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf01005_217574-221498' '(gnl|cdd|35365 : 282.0) no description available & (at2g36690 : 235.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G60290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33294 : 177.0) no description available & (p51091|ldox_maldo : 173.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 470.0) & (original description: Putative F3H2, Description = F3H2 protein, PFAM = PF03171;PF14226)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf01130_91100-95076' '(at1g48910 : 415.0) YUC10; FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: regulation of anatomical structure morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT1G21430.1); Has 10747 Blast hits to 10734 proteins in 1402 species: Archae - 41; Bacteria - 5770; Metazoa - 759; Fungi - 1564; Plants - 638; Viruses - 0; Other Eukaryotes - 1975 (source: NCBI BLink). & (gnl|cdd|36613 : 217.0) no description available & (gnl|cdd|32255 : 175.0) no description available & (reliability: 830.0) & (original description: Putative YUC11, Description = Probable indole-3-pyruvate monooxygenase YUCCA11, PFAM = PF13738)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf01155_1-12703' '(at1g23740 : 409.0) Oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to cold; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Quinone oxidoreductase/zeta-crystallin, conserved site (InterPro:IPR002364), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT4G13010.1); Has 40144 Blast hits to 39997 proteins in 2741 species: Archae - 622; Bacteria - 25898; Metazoa - 1494; Fungi - 3833; Plants - 1284; Viruses - 3; Other Eukaryotes - 7010 (source: NCBI BLink). & (gnl|cdd|30949 : 216.0) no description available & (gnl|cdd|36412 : 208.0) no description available & (q8h0m1|qorh_spiol : 87.0) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) & (reliability: 818.0) & (original description: Putative EO, Description = 2-methylene-furan-3-one reductase, PFAM = PF08240;PF13602)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf01184_882015-886987' '(gnl|cdd|36410 : 433.0) no description available & (at5g16990 : 422.0) molecular function has not been defined, was shown involved in oxidative stress tolerance.; Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32313 : 321.0) no description available & (reliability: 844.0) & (original description: Putative DBR, Description = 2-alkenal reductase (NADP(+)-dependent), PFAM = PF16884;PF00107)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf01272_127990-145983' '(at1g49670 : 907.0) molecular function has not been defined. Was shown involved in oxidative stress tolerance.; NQR; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: response to oxidative stress, metabolic process; LOCATED IN: mitochondrion, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198), GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Quinone oxidoreductase/zeta-crystallin, conserved site (InterPro:IPR002364), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G37980.1). & (gnl|cdd|39371 : 225.0) no description available & (gnl|cdd|32313 : 195.0) no description available & (reliability: 1814.0) & (original description: Putative Zadh2, Description = Zinc-binding alcohol dehydrogenase domain-containing protein 2, PFAM = PF00106;PF08240;PF00107)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf01545_15935-21825' '(at5g11330 : 482.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, monooxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT2G35660.1). & (gnl|cdd|37825 : 244.0) no description available & (gnl|cdd|82164 : 154.0) no description available & (reliability: 964.0) & (original description: Putative BnaC09g45280D, Description = BnaC09g45280D protein, PFAM = PF01494)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf01974_51075-55014' '(at2g22260 : 318.0) oxidoreductase, 2OG-Fe(II) oxygenase family protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G22270.1); Has 1561 Blast hits to 1561 proteins in 515 species: Archae - 0; Bacteria - 839; Metazoa - 118; Fungi - 181; Plants - 86; Viruses - 14; Other Eukaryotes - 323 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative Os06g0286310, Description = Os06g0286310 protein, PFAM = PF13532)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf01976_79323-83983' '(at3g13682 : 974.0) Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering loci FLC and FWA.; LSD1-like2 (LDL2); CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), SWIRM (InterPro:IPR007526); BEST Arabidopsis thaliana protein match is: LSD1-like 1 (TAIR:AT1G62830.1); Has 5703 Blast hits to 5142 proteins in 914 species: Archae - 48; Bacteria - 2121; Metazoa - 1514; Fungi - 564; Plants - 617; Viruses - 0; Other Eukaryotes - 839 (source: NCBI BLink). & (gnl|cdd|35252 : 469.0) no description available & (gnl|cdd|85554 : 245.0) no description available & (o64411|pao_maize : 106.0) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (reliability: 1948.0) & (original description: Putative LDL2, Description = Lysine-specific histone demethylase 1 homolog 2, PFAM = PF04433;PF01593)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf01985_223795-227585' '(at1g48910 : 417.0) YUC10; FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: regulation of anatomical structure morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT1G21430.1); Has 10747 Blast hits to 10734 proteins in 1402 species: Archae - 41; Bacteria - 5770; Metazoa - 759; Fungi - 1564; Plants - 638; Viruses - 0; Other Eukaryotes - 1975 (source: NCBI BLink). & (gnl|cdd|36613 : 218.0) no description available & (gnl|cdd|32255 : 180.0) no description available & (reliability: 834.0) & (original description: Putative YUC10, Description = Probable indole-3-pyruvate monooxygenase YUCCA10, PFAM = PF13738)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02059_525533-531686' '(at1g19250 : 362.0) FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites.; flavin-dependent monooxygenase 1 (FMO1); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: stem, leaf whorl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Dimethylaniline monooxygenase, N-oxide-forming (InterPro:IPR012143), Flavin-containing amine oxidase (InterPro:IPR001613), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G45180.1); Has 7639 Blast hits to 7432 proteins in 837 species: Archae - 6; Bacteria - 3396; Metazoa - 753; Fungi - 1311; Plants - 833; Viruses - 0; Other Eukaryotes - 1340 (source: NCBI BLink). & (gnl|cdd|84997 : 153.0) no description available & (gnl|cdd|36613 : 151.0) no description available & (reliability: 724.0) & (original description: Putative Os04g0223500, Description = OSJNBb0072N21.3 protein, PFAM = PF00743)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02122_72977-79114' '(at2g17970 : 370.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G36090.2). & (gnl|cdd|39378 : 218.0) no description available & (reliability: 740.0) & (original description: Putative At1g48980, Description = 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein, PFAM = PF13532)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02142_32483-36090' '(at4g29720 : 564.0) polyamine oxidase 5 (PAO5); FUNCTIONS IN: primary amine oxidase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: LSD1-like 3 (TAIR:AT4G16310.1); Has 3107 Blast hits to 2713 proteins in 458 species: Archae - 2; Bacteria - 686; Metazoa - 1027; Fungi - 508; Plants - 550; Viruses - 0; Other Eukaryotes - 334 (source: NCBI BLink). & (gnl|cdd|35904 : 371.0) no description available & (gnl|cdd|85554 : 214.0) no description available & (o64411|pao_maize : 85.5) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (reliability: 1128.0) & (original description: Putative PAO5, Description = Probable polyamine oxidase 5, PFAM = PF01593)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02201_7274-73562' '(at1g19250 : 272.0) FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites.; flavin-dependent monooxygenase 1 (FMO1); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: stem, leaf whorl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Dimethylaniline monooxygenase, N-oxide-forming (InterPro:IPR012143), Flavin-containing amine oxidase (InterPro:IPR001613), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G45180.1); Has 7639 Blast hits to 7432 proteins in 837 species: Archae - 6; Bacteria - 3396; Metazoa - 753; Fungi - 1311; Plants - 833; Viruses - 0; Other Eukaryotes - 1340 (source: NCBI BLink). & (gnl|cdd|84997 : 82.3) no description available & (reliability: 544.0) & (original description: Putative PGSC0003DMG400018660, Description = Flavin-containing monooxygenase, PFAM = PF00743)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02236_263282-266859' '(at4g29720 : 552.0) polyamine oxidase 5 (PAO5); FUNCTIONS IN: primary amine oxidase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: LSD1-like 3 (TAIR:AT4G16310.1); Has 3107 Blast hits to 2713 proteins in 458 species: Archae - 2; Bacteria - 686; Metazoa - 1027; Fungi - 508; Plants - 550; Viruses - 0; Other Eukaryotes - 334 (source: NCBI BLink). & (gnl|cdd|35904 : 381.0) no description available & (gnl|cdd|85554 : 204.0) no description available & (reliability: 1104.0) & (original description: Putative PAO5, Description = Probable polyamine oxidase 5, PFAM = PF01593)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02244_83652-88374' '(at4g15760 : 335.0) Encodes a protein with similarity to monooxygenases that are known to degrade salicylic acid (SA).; monooxygenase 1 (MO1); FUNCTIONS IN: monooxygenase activity; INVOLVED IN: response to bacterium; LOCATED IN: endoplasmic reticulum; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT4G15765.1). & (gnl|cdd|37825 : 288.0) no description available & (gnl|cdd|30999 : 161.0) no description available & (reliability: 670.0) & (original description: Putative MO1, Description = Monooxygenase 1, PFAM = PF01494)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02271_286487-290986' '(gnl|cdd|35365 : 303.0) no description available & (at5g24530 : 249.0) Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew.; DOWNY MILDEW RESISTANT 6 (DMR6); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to fungus, response to bacterium, flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q06942|fl3h_maldo : 210.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 162.0) no description available & (reliability: 488.0) & (original description: Putative DMR6, Description = Protein DOWNY MILDEW RESISTANCE 6, PFAM = PF14226;PF03171)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02319_999893-1004542' '(at5g25620 : 621.0) YUCCA6 (YUC6); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: auxin biosynthetic process; EXPRESSED IN: sepal; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT4G13260.1). & (gnl|cdd|36613 : 309.0) no description available & (gnl|cdd|32255 : 177.0) no description available & (reliability: 1242.0) & (original description: Putative YUC6, Description = Indole-3-pyruvate monooxygenase YUCCA6, PFAM = PF00743)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02552_306419-317368' '(at5g05320 : 357.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT4G38540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37825 : 274.0) no description available & (gnl|cdd|30999 : 130.0) no description available & (reliability: 714.0) & (original description: Putative MO2, Description = 3-hydroxybenzoate 6-hydroxylase 1, PFAM = PF01494)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02569_1926-19786' '(at4g12290 : 986.0) Copper amine oxidase family protein; FUNCTIONS IN: quinone binding, primary amine oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2-terminal (InterPro:IPR015800), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT1G62810.1); Has 1550 Blast hits to 1547 proteins in 275 species: Archae - 14; Bacteria - 376; Metazoa - 251; Fungi - 449; Plants - 243; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|36400 : 820.0) no description available & (gnl|cdd|85290 : 588.0) no description available & (q43077|amo_pea : 511.0) Amine oxidase [copper-containing] precursor (EC 1.4.3.6) - Pisum sativum (Garden pea) & (reliability: 1972.0) & (original description: Putative cuAO, Description = Amine oxidase, PFAM = PF02728;PF01179;PF02727)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02794_727356-730486' '(at2g32300 : 108.0) Encodes a uclacyanin, a protein precursor that is closely related to precursors of stellacyanins and a blue copper protein from pea pods.; uclacyanin 1 (UCC1); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G26720.1); Has 7686 Blast hits to 4254 proteins in 462 species: Archae - 22; Bacteria - 692; Metazoa - 1349; Fungi - 628; Plants - 1950; Viruses - 176; Other Eukaryotes - 2869 (source: NCBI BLink). & (gnl|cdd|66026 : 104.0) no description available & (q41001|bcp_pea : 87.4) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 216.0) & (original description: Putative UCC1, Description = Blue copper protein, PFAM = PF02298)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02794_727386-730831' '(at2g32300 : 108.0) Encodes a uclacyanin, a protein precursor that is closely related to precursors of stellacyanins and a blue copper protein from pea pods.; uclacyanin 1 (UCC1); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G26720.1); Has 7686 Blast hits to 4254 proteins in 462 species: Archae - 22; Bacteria - 692; Metazoa - 1349; Fungi - 628; Plants - 1950; Viruses - 176; Other Eukaryotes - 2869 (source: NCBI BLink). & (gnl|cdd|66026 : 103.0) no description available & (q41001|bcp_pea : 86.7) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 216.0) & (original description: Putative Os08g0137900, Description = Os08g0137900 protein, PFAM = PF02298)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02803_311307-317052' '(at3g10390 : 1038.0) Encodes a plant homolog of a SWIRM domain containing protein found in histone deacetylase complexes in mammals. Lesions in FLD result in hyperacetylation of histones in FLC chromatin, up-regulation of FLC expression and extremely delayed flowering. FLD plays a key role in regulating the reproductive competence of the shoot and results in different developmental phase transitions in Arabidopsis.; FLOWERING LOCUS D (FLD); FUNCTIONS IN: primary amine oxidase activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, positive regulation of flower development, histone deacetylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), SWIRM (InterPro:IPR007526); BEST Arabidopsis thaliana protein match is: LSD1-like 1 (TAIR:AT1G62830.1); Has 6633 Blast hits to 6189 proteins in 1142 species: Archae - 35; Bacteria - 2778; Metazoa - 1469; Fungi - 560; Plants - 667; Viruses - 0; Other Eukaryotes - 1124 (source: NCBI BLink). & (gnl|cdd|35252 : 474.0) no description available & (gnl|cdd|85554 : 249.0) no description available & (o64411|pao_maize : 97.4) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (reliability: 2076.0) & (original description: Putative FLD, Description = Protein FLOWERING LOCUS D, PFAM = PF04433;PF01593)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02849_179300-184729' '(at5g66920 : 736.0) SKU5 similar 17 (sks17); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: response to karrikin; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 15 (TAIR:AT4G37160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36477 : 591.0) no description available & (p29162|ntp3_tobac : 559.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|87357 : 129.0) no description available & (reliability: 1472.0) & (original description: Putative sks4, Description = L-ascorbate oxidase-like protein, PFAM = PF07731;PF00394;PF07732)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02864_1149733-1155286' '(at2g17970 : 399.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G36090.2). & (gnl|cdd|39378 : 227.0) no description available & (reliability: 774.0) & (original description: Putative At1g48980, Description = 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein, PFAM = PF13532)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02922_316223-320973' '(at5g07800 : 689.0) Flavin-binding monooxygenase family protein; FUNCTIONS IN: NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase FMO (InterPro:IPR000960), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G61290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36613 : 396.0) no description available & (gnl|cdd|32255 : 144.0) no description available & (reliability: 1378.0) & (original description: Putative At5g07800, Description = Flavin-containing monooxygenase FMO GS-OX-like 9, PFAM = PF00743;PF00743)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf02994_286039-293393' '(at1g23010 : 784.0) Encodes a protein with multicopper oxidase activity. Located in ER. Function together with LPR2 (AT1G71040) and a P5-type ATPase (At5g23630/PDR2) in a common pathway that adjusts root meristem activity to Pi (inorganic phosphate) availability.; Low Phosphate Root1 (LPR1); CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G71040.1); Has 3143 Blast hits to 2693 proteins in 814 species: Archae - 12; Bacteria - 2669; Metazoa - 8; Fungi - 64; Plants - 261; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|32315 : 142.0) no description available & (reliability: 1568.0) & (original description: Putative LPR1, Description = Multicopper oxidase LPR1, PFAM = PF00394;PF07731;PF07732)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf03009_18834-28184' '(at4g33910 : 385.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, iron ion binding, L-ascorbic acid binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G23096.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36804 : 212.0) no description available & (gnl|cdd|47971 : 134.0) no description available & (reliability: 770.0) & (original description: Putative P4H1, Description = Prolyl 4-hydroxylase alpha-like protein, PFAM = PF13640)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf03046_140955-146543' '(at2g36690 : 455.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G60290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 300.0) no description available & (p51091|ldox_maldo : 190.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 176.0) no description available & (reliability: 910.0) & (original description: Putative DLO2, Description = Protein DMR6-LIKE OXYGENASE 2, PFAM = PF03171;PF14226)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf03128_935460-941443' '(at5g05320 : 379.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT4G38540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37825 : 287.0) no description available & (gnl|cdd|30999 : 154.0) no description available & (reliability: 758.0) & (original description: Putative MO2, Description = FAD/NAD(P)-binding oxidoreductase family protein, PFAM = PF01494)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf03141_1112722-1118204' '(at1g76160 : 807.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 607.0) no description available & (q00624|aso_brana : 542.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 138.0) no description available & (reliability: 1482.0) & (original description: Putative sks5, Description = AT1G76160 protein, PFAM = PF07731;PF07732;PF00394)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf03208_60045-74165' '(at1g48910 : 417.0) YUC10; FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: regulation of anatomical structure morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT1G21430.1); Has 10747 Blast hits to 10734 proteins in 1402 species: Archae - 41; Bacteria - 5770; Metazoa - 759; Fungi - 1564; Plants - 638; Viruses - 0; Other Eukaryotes - 1975 (source: NCBI BLink). & (gnl|cdd|36613 : 220.0) no description available & (gnl|cdd|32255 : 168.0) no description available & (reliability: 834.0) & (original description: Putative YUC10, Description = Probable indole-3-pyruvate monooxygenase YUCCA10, PFAM = PF00743)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf03263_390999-394430' '(at4g28720 : 624.0) Auxin biosynthetic gene regulated by RVE1. Overexpression leads to suppression of bri1 phenotype.; YUCCA 8 (YUC8); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: brassinosteroid mediated signaling pathway, auxin biosynthetic process; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G43890.1); Has 11557 Blast hits to 11539 proteins in 1628 species: Archae - 52; Bacteria - 6582; Metazoa - 787; Fungi - 1560; Plants - 663; Viruses - 0; Other Eukaryotes - 1913 (source: NCBI BLink). & (gnl|cdd|36613 : 308.0) no description available & (gnl|cdd|32255 : 184.0) no description available & (reliability: 1248.0) & (original description: Putative YUC8, Description = Probable indole-3-pyruvate monooxygenase YUCCA8, PFAM = PF00743)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf03446_994486-997943' '(gnl|cdd|35365 : 277.0) no description available & (at2g36690 : 226.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G60290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p51091|ldox_maldo : 172.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 169.0) no description available & (reliability: 452.0) & (original description: Putative F3H2, Description = F3H2 protein, PFAM = PF03171;PF14226)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf03735_256649-263293' '(at2g17970 : 514.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G36090.2). & (gnl|cdd|39378 : 244.0) no description available & (reliability: 976.0) & (original description: Putative At2g17970, Description = 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein, PFAM = PF13532)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf03934_324022-327845' '(at4g28720 : 638.0) Auxin biosynthetic gene regulated by RVE1. Overexpression leads to suppression of bri1 phenotype.; YUCCA 8 (YUC8); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: brassinosteroid mediated signaling pathway, auxin biosynthetic process; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G43890.1); Has 11557 Blast hits to 11539 proteins in 1628 species: Archae - 52; Bacteria - 6582; Metazoa - 787; Fungi - 1560; Plants - 663; Viruses - 0; Other Eukaryotes - 1913 (source: NCBI BLink). & (gnl|cdd|36613 : 296.0) no description available & (gnl|cdd|32255 : 186.0) no description available & (reliability: 1276.0) & (original description: Putative fzy, Description = Flavin-containing monooxygenase, PFAM = PF00743)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf04020_379955-386706' '(at1g65840 : 686.0) encodes a peroxisomal polyamine oxidase, involved in the back-conversion polyamine degradation pathway. Among the five polyamine oxidases in the Arabidopsis genome, PAO4 is the major isoform in root peroxisomes.; polyamine oxidase 4 (PAO4); CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Flavin-containing amine oxidase (InterPro:IPR001613); BEST Arabidopsis thaliana protein match is: polyamine oxidase 3 (TAIR:AT3G59050.1); Has 7028 Blast hits to 6613 proteins in 1153 species: Archae - 127; Bacteria - 2858; Metazoa - 1453; Fungi - 590; Plants - 766; Viruses - 0; Other Eukaryotes - 1234 (source: NCBI BLink). & (gnl|cdd|35252 : 417.0) no description available & (gnl|cdd|85554 : 246.0) no description available & (o64411|pao_maize : 135.0) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (reliability: 1372.0) & (original description: Putative PAO4, Description = Probable polyamine oxidase 4, PFAM = PF01593)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf04294_332214-337431' '(at1g19250 : 355.0) FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites.; flavin-dependent monooxygenase 1 (FMO1); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: stem, leaf whorl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Dimethylaniline monooxygenase, N-oxide-forming (InterPro:IPR012143), Flavin-containing amine oxidase (InterPro:IPR001613), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G45180.1); Has 7639 Blast hits to 7432 proteins in 837 species: Archae - 6; Bacteria - 3396; Metazoa - 753; Fungi - 1311; Plants - 833; Viruses - 0; Other Eukaryotes - 1340 (source: NCBI BLink). & (gnl|cdd|84997 : 176.0) no description available & (gnl|cdd|36613 : 168.0) no description available & (reliability: 710.0) & (original description: Putative PGSC0003DMG400014673, Description = Flavin-containing monooxygenase, PFAM = PF00743)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf04621_15864-21327' '(at2g36690 : 448.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G60290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 291.0) no description available & (gnl|cdd|33294 : 185.0) no description available & (p51091|ldox_maldo : 179.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 896.0) & (original description: Putative BnaA05g07660D, Description = BnaA05g07660D protein, PFAM = PF14226;PF03171)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf04674_24452-51638' '(at5g18900 : 448.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123), Metridin-like ShK toxin (InterPro:IPR003582); BEST Arabidopsis thaliana protein match is: P4H isoform 2 (TAIR:AT3G06300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36804 : 269.0) no description available & (gnl|cdd|47971 : 154.0) no description available & (reliability: 896.0) & (original description: Putative P4H4, Description = Probable prolyl 4-hydroxylase 4, PFAM = PF13640)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf04711_103725-111530' '(at1g76160 : 874.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 616.0) no description available & (p29162|ntp3_tobac : 578.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84744 : 146.0) no description available & (reliability: 1598.0) & (original description: Putative sks7, Description = SKU5 similar 7 protein, PFAM = PF07731;PF00394;PF07732)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf04764_17862-22318' '(at5g25620 : 592.0) YUCCA6 (YUC6); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: auxin biosynthetic process; EXPRESSED IN: sepal; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT4G13260.1). & (gnl|cdd|36613 : 295.0) no description available & (gnl|cdd|32255 : 171.0) no description available & (reliability: 1184.0) & (original description: Putative YUC6, Description = Indole-3-pyruvate monooxygenase YUCCA6, PFAM = PF00743)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf04875_656415-661849' '(at2g36690 : 452.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G60290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35365 : 299.0) no description available & (p51091|ldox_maldo : 189.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|33294 : 177.0) no description available & (reliability: 904.0) & (original description: Putative DLO2, Description = Protein DMR6-LIKE OXYGENASE 2, PFAM = PF14226;PF03171)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf05030_526471-532296' '(at4g25240 : 797.0) Encodes GPI-anchored SKU5-like protein.; SKU5 similar 1 (SKS1); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 2 (TAIR:AT5G51480.1); Has 5221 Blast hits to 5195 proteins in 927 species: Archae - 4; Bacteria - 1535; Metazoa - 283; Fungi - 1954; Plants - 1280; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (gnl|cdd|36477 : 573.0) no description available & (q00624|aso_brana : 439.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 141.0) no description available & (reliability: 1594.0) & (original description: Putative SKS1, Description = Monocopper oxidase-like protein SKS1, PFAM = PF00394;PF07732;PF07731)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf05087_759579-764708' '(at4g37160 : 710.0) SKU5 similar 15 (sks15); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 16 (TAIR:AT2G23630.1); Has 5537 Blast hits to 5515 proteins in 1034 species: Archae - 14; Bacteria - 1701; Metazoa - 277; Fungi - 2124; Plants - 1252; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (gnl|cdd|36477 : 576.0) no description available & (p29162|ntp3_tobac : 554.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|87357 : 135.0) no description available & (reliability: 1420.0) & (original description: Putative sks16, Description = Protein SKU5 similar 16, PFAM = PF00394;PF07732;PF07731)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf05348_104271-107569' '(at3g17675 : 106.0) Encodes a Plantacyanin/Basic blue family protein; Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT5G26330.1); Has 1434 Blast hits to 1387 proteins in 64 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1434; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 103.0) no description available & (q41001|bcp_pea : 89.4) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 200.0) & (original description: Putative BCP, Description = Blue copper protein, PFAM = PF02298)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf05385_250978-258812' '(at1g76160 : 874.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 614.0) no description available & (q00624|aso_brana : 574.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 146.0) no description available & (reliability: 1592.0) & (original description: Putative sks5, Description = AT1G76160 protein, PFAM = PF00394;PF07731;PF07732)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf05395_499405-504754' '(at1g19250 : 324.0) FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites.; flavin-dependent monooxygenase 1 (FMO1); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: stem, leaf whorl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Dimethylaniline monooxygenase, N-oxide-forming (InterPro:IPR012143), Flavin-containing amine oxidase (InterPro:IPR001613), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G45180.1); Has 7639 Blast hits to 7432 proteins in 837 species: Archae - 6; Bacteria - 3396; Metazoa - 753; Fungi - 1311; Plants - 833; Viruses - 0; Other Eukaryotes - 1340 (source: NCBI BLink). & (gnl|cdd|36613 : 150.0) no description available & (gnl|cdd|84997 : 134.0) no description available & (reliability: 648.0) & (original description: Putative uaz122, Description = Flavin-containing monooxygenase, PFAM = PF00743;PF00743)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf05438_415214-421832' '(at4g22010 : 810.0) SKU5 similar 4 (sks4); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 5 (TAIR:AT1G76160.1); Has 5236 Blast hits to 5188 proteins in 961 species: Archae - 4; Bacteria - 1473; Metazoa - 274; Fungi - 2031; Plants - 1319; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|36477 : 601.0) no description available & (q00624|aso_brana : 550.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 137.0) no description available & (reliability: 1620.0) & (original description: Putative sks4, Description = At4g22010, PFAM = PF00394;PF07731;PF07732)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf05472_66669-71521' '(at5g54830 : 1162.0) DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein; FUNCTIONS IN: dopamine beta-monooxygenase activity, monooxygenase activity; INVOLVED IN: histidine catabolic process, metabolic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Electron transfer DM13 (InterPro:IPR019545), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593), DOMON (InterPro:IPR013050); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane with DOMON related domain (TAIR:AT3G61750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39929 : 354.0) no description available & (gnl|cdd|47940 : 110.0) no description available & (reliability: 2324.0) & (original description: Putative At5g54830, Description = Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830, PFAM = PF01578;PF03351;PF03351;PF10517)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf05649_524049-530874' '(gnl|cdd|36410 : 515.0) no description available & (at5g16970 : 513.0) encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls; alkenal reductase (AER); FUNCTIONS IN: 2-alkenal reductase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G17000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32313 : 350.0) no description available & (reliability: 1026.0) & (original description: Putative DBR, Description = 2-alkenal reductase (NADP(+)-dependent), PFAM = PF16884;PF00107)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf05682_79710-84893' '(at1g19250 : 681.0) FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites.; flavin-dependent monooxygenase 1 (FMO1); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: stem, leaf whorl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Dimethylaniline monooxygenase, N-oxide-forming (InterPro:IPR012143), Flavin-containing amine oxidase (InterPro:IPR001613), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G45180.1); Has 7639 Blast hits to 7432 proteins in 837 species: Archae - 6; Bacteria - 3396; Metazoa - 753; Fungi - 1311; Plants - 833; Viruses - 0; Other Eukaryotes - 1340 (source: NCBI BLink). & (gnl|cdd|36613 : 219.0) no description available & (gnl|cdd|84997 : 150.0) no description available & (reliability: 1362.0) & (original description: Putative FMO1, Description = Probable flavin-containing monooxygenase 1, PFAM = PF00743)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf05820_35230-39688' '(at4g14940 : 785.0) atao1 gene of Arabidopsis thaliana encodes an extracellular copper amine oxidase expressed during early stages of vascular tissue development.; amine oxidase 1 (AO1); FUNCTIONS IN: primary amine oxidase activity, copper ion binding; INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2-terminal (InterPro:IPR015800), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT1G31690.1); Has 1545 Blast hits to 1541 proteins in 275 species: Archae - 14; Bacteria - 376; Metazoa - 250; Fungi - 453; Plants - 241; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|36400 : 697.0) no description available & (q43077|amo_pea : 629.0) Amine oxidase [copper-containing] precursor (EC 1.4.3.6) - Pisum sativum (Garden pea) & (gnl|cdd|83851 : 489.0) no description available & (reliability: 1570.0) & (original description: Putative cuAO, Description = Amine oxidase, PFAM = PF02727;PF02728;PF01179)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf05858_91931-101468' '(at2g42490 : 1233.0) Copper amine oxidase family protein; FUNCTIONS IN: quinone binding, primary amine oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT3G43670.1); Has 1554 Blast hits to 1550 proteins in 277 species: Archae - 14; Bacteria - 379; Metazoa - 243; Fungi - 461; Plants - 232; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|83851 : 774.0) no description available & (gnl|cdd|36400 : 659.0) no description available & (q43077|amo_pea : 237.0) Amine oxidase [copper-containing] precursor (EC 1.4.3.6) - Pisum sativum (Garden pea) & (reliability: 2466.0) & (original description: Putative tynA, Description = Amine oxidase, PFAM = PF01179;PF02728)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf06094_193699-196824' '(gnl|cdd|66026 : 104.0) no description available & (at2g32300 : 102.0) Encodes a uclacyanin, a protein precursor that is closely related to precursors of stellacyanins and a blue copper protein from pea pods.; uclacyanin 1 (UCC1); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G26720.1); Has 7686 Blast hits to 4254 proteins in 462 species: Archae - 22; Bacteria - 692; Metazoa - 1349; Fungi - 628; Plants - 1950; Viruses - 176; Other Eukaryotes - 2869 (source: NCBI BLink). & (q41001|bcp_pea : 85.9) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 204.0) & (original description: Putative UCC1, Description = Blue copper protein, PFAM = PF02298)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf06267_338954-345391' '(at2g17970 : 514.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G36090.2). & (gnl|cdd|39378 : 241.0) no description available & (reliability: 980.0) & (original description: Putative At2g17970, Description = 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein, PFAM = PF13532)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf06542_179812-186982' '(gnl|cdd|36410 : 505.0) no description available & (at5g16990 : 499.0) molecular function has not been defined, was shown involved in oxidative stress tolerance.; Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32313 : 349.0) no description available & (reliability: 998.0) & (original description: Putative ADH3, Description = NADP-dependent alkenal double bond reductase, PFAM = PF00107;PF16884)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf06757_10145-16838' '(at1g65840 : 697.0) encodes a peroxisomal polyamine oxidase, involved in the back-conversion polyamine degradation pathway. Among the five polyamine oxidases in the Arabidopsis genome, PAO4 is the major isoform in root peroxisomes.; polyamine oxidase 4 (PAO4); CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Flavin-containing amine oxidase (InterPro:IPR001613); BEST Arabidopsis thaliana protein match is: polyamine oxidase 3 (TAIR:AT3G59050.1); Has 7028 Blast hits to 6613 proteins in 1153 species: Archae - 127; Bacteria - 2858; Metazoa - 1453; Fungi - 590; Plants - 766; Viruses - 0; Other Eukaryotes - 1234 (source: NCBI BLink). & (gnl|cdd|35252 : 412.0) no description available & (gnl|cdd|85554 : 242.0) no description available & (o64411|pao_maize : 124.0) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (reliability: 1394.0) & (original description: Putative PO, Description = Polyamine oxidase, PFAM = PF01593)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf07253_260521-266880' '(at1g65840 : 694.0) encodes a peroxisomal polyamine oxidase, involved in the back-conversion polyamine degradation pathway. Among the five polyamine oxidases in the Arabidopsis genome, PAO4 is the major isoform in root peroxisomes.; polyamine oxidase 4 (PAO4); CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Flavin-containing amine oxidase (InterPro:IPR001613); BEST Arabidopsis thaliana protein match is: polyamine oxidase 3 (TAIR:AT3G59050.1); Has 7028 Blast hits to 6613 proteins in 1153 species: Archae - 127; Bacteria - 2858; Metazoa - 1453; Fungi - 590; Plants - 766; Viruses - 0; Other Eukaryotes - 1234 (source: NCBI BLink). & (gnl|cdd|35252 : 410.0) no description available & (gnl|cdd|85554 : 244.0) no description available & (o64411|pao_maize : 129.0) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (reliability: 1388.0) & (original description: Putative PAO2, Description = Putative polyamine oxidase 4, PFAM = PF01593)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf07516_341921-345607' '(at1g23740 : 266.0) Oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to cold; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Quinone oxidoreductase/zeta-crystallin, conserved site (InterPro:IPR002364), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT4G13010.1); Has 40144 Blast hits to 39997 proteins in 2741 species: Archae - 622; Bacteria - 25898; Metazoa - 1494; Fungi - 3833; Plants - 1284; Viruses - 3; Other Eukaryotes - 7010 (source: NCBI BLink). & (gnl|cdd|30949 : 190.0) no description available & (gnl|cdd|36412 : 159.0) no description available & (q8h0m1|qorh_spiol : 141.0) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) & (reliability: 532.0) & (original description: Putative EO, Description = 2-methylene-furan-3-one reductase, PFAM = PF13602;PF08240)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf07607_404104-411221' '(at4g33910 : 394.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, iron ion binding, L-ascorbic acid binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G23096.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36804 : 211.0) no description available & (gnl|cdd|47971 : 135.0) no description available & (reliability: 788.0) & (original description: Putative P4H9, Description = Probable prolyl 4-hydroxylase 9, PFAM = PF13640)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf07673_94905-107700' '(gnl|cdd|36410 : 289.0) no description available & (gnl|cdd|32313 : 282.0) no description available & (at5g16970 : 207.0) encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls; alkenal reductase (AER); FUNCTIONS IN: 2-alkenal reductase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G17000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative yfmJ, Description = Putative NADP-dependent oxidoreductase YfmJ, PFAM = PF00107;PF16884)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf07974_114663-119357' '(at5g11320 : 603.0) Belongs to the YUC gene family. Encodes a predicted flavin monooxygenase YUC4 involved in auxin biosynthesis and plant development.; YUCCA4 (YUC4); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: in 7 processes; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT4G32540.1); Has 12265 Blast hits to 12250 proteins in 1811 species: Archae - 85; Bacteria - 7080; Metazoa - 781; Fungi - 1596; Plants - 658; Viruses - 0; Other Eukaryotes - 2065 (source: NCBI BLink). & (gnl|cdd|36613 : 283.0) no description available & (gnl|cdd|32255 : 157.0) no description available & (reliability: 1206.0) & (original description: Putative fzy, Description = Flavin-containing monooxygenase, PFAM = PF00743)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf08039_280627-292430' '(gnl|cdd|36410 : 282.0) no description available & (gnl|cdd|32313 : 280.0) no description available & (at5g16970 : 207.0) encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls; alkenal reductase (AER); FUNCTIONS IN: 2-alkenal reductase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G17000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative yfmJ, Description = Putative NADP-dependent oxidoreductase YfmJ, PFAM = PF00107;PF16884)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf08047_296441-332148' '(at1g76160 : 826.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 619.0) no description available & (p29162|ntp3_tobac : 583.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84744 : 143.0) no description available & (reliability: 1574.0) & (original description: Putative sks5, Description = AT1G76160 protein, PFAM = PF07731;PF07732;PF00394)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf08072_179050-221882' '(at5g06580 : 865.0) Encodes a protein with glycolate dehydrogenase activity, which was shown to complement various subunits of the E. coli glycolate oxidase complex. It has not been ruled out that the enzyme might be involved in other catalytic activities in vivo.; FAD-linked oxidases family protein; FUNCTIONS IN: glycolate oxidase activity, glycolate dehydrogenase activity, D-lactate dehydrogenase (cytochrome) activity, ATP binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), FAD-linked oxidase, C-terminal (InterPro:IPR004113), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094), FAD-binding, type 2, subdomain 1 (InterPro:IPR016167); BEST Arabidopsis thaliana protein match is: FAD-linked oxidases family protein (TAIR:AT4G36400.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36445 : 452.0) no description available & (gnl|cdd|30625 : 347.0) no description available & (reliability: 1730.0) & (original description: Putative DLD, Description = D-lactate dehydrogenase [cytochrome], mitochondrial, PFAM = PF02913;PF01565)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf08072_184773-210586' '(at5g06580 : 468.0) Encodes a protein with glycolate dehydrogenase activity, which was shown to complement various subunits of the E. coli glycolate oxidase complex. It has not been ruled out that the enzyme might be involved in other catalytic activities in vivo.; FAD-linked oxidases family protein; FUNCTIONS IN: glycolate oxidase activity, glycolate dehydrogenase activity, D-lactate dehydrogenase (cytochrome) activity, ATP binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), FAD-linked oxidase, C-terminal (InterPro:IPR004113), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094), FAD-binding, type 2, subdomain 1 (InterPro:IPR016167); BEST Arabidopsis thaliana protein match is: FAD-linked oxidases family protein (TAIR:AT4G36400.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36445 : 279.0) no description available & (gnl|cdd|30625 : 205.0) no description available & (reliability: 936.0) & (original description: Putative dld, Description = Lactate dehydrogenase, PFAM = PF02913;PF01565)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf08293_10851-19073' '(at5g61510 : 556.0) GroES-like zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity, zinc ion binding; INVOLVED IN: cell differentiation, response to high light intensity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT4G21580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36411 : 447.0) no description available & (gnl|cdd|83461 : 318.0) no description available & (reliability: 1112.0) & (original description: Putative qor, Description = Quinone oxidoreductase, PFAM = PF08240;PF00107)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf08767_4772-10173' '(gnl|cdd|36410 : 430.0) no description available & (at5g16990 : 420.0) molecular function has not been defined, was shown involved in oxidative stress tolerance.; Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32313 : 318.0) no description available & (reliability: 840.0) & (original description: Putative ADH3, Description = NADP-dependent alkenal double bond reductase, PFAM = PF00107;PF16884)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf08834_70631-78241' '(at5g66060 : 474.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, iron ion binding, L-ascorbic acid binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G20270.1). & (gnl|cdd|36804 : 279.0) no description available & (gnl|cdd|47971 : 159.0) no description available & (reliability: 948.0) & (original description: Putative P4H10, Description = Probable prolyl 4-hydroxylase 10, PFAM = PF13640)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf09150_267813-273087' '(at5g18900 : 433.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123), Metridin-like ShK toxin (InterPro:IPR003582); BEST Arabidopsis thaliana protein match is: P4H isoform 2 (TAIR:AT3G06300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36804 : 271.0) no description available & (gnl|cdd|47971 : 153.0) no description available & (reliability: 866.0) & (original description: Putative P4H4, Description = Probable prolyl 4-hydroxylase 4, PFAM = PF01549;PF13640)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf09456_67273-72617' '(at2g35660 : 602.0) Encodes a member of a novel gene family with homology to known proteins involved in hydroxylation and oxidation of an aromatic ring.; CTF2A; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT2G29720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37825 : 385.0) no description available & (gnl|cdd|30999 : 174.0) no description available & (q40412|aba2_nicpl : 103.0) Zeaxanthin epoxidase, chloroplast precursor (EC 1.14.13.90) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1204.0) & (original description: Putative CTF2A, Description = CTF2A like oxidoreductase, PFAM = PF01494)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf09459_97784-111137' '(at1g48910 : 417.0) YUC10; FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: regulation of anatomical structure morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT1G21430.1); Has 10747 Blast hits to 10734 proteins in 1402 species: Archae - 41; Bacteria - 5770; Metazoa - 759; Fungi - 1564; Plants - 638; Viruses - 0; Other Eukaryotes - 1975 (source: NCBI BLink). & (gnl|cdd|36613 : 220.0) no description available & (gnl|cdd|32255 : 162.0) no description available & (reliability: 834.0) & (original description: Putative YUC10, Description = Probable indole-3-pyruvate monooxygenase YUCCA10, PFAM = PF00743)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf09846_128279-136878' '(at4g13010 : 481.0) Oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT1G23740.1); Has 34133 Blast hits to 33976 proteins in 2527 species: Archae - 549; Bacteria - 21108; Metazoa - 1143; Fungi - 3531; Plants - 1393; Viruses - 3; Other Eukaryotes - 6406 (source: NCBI BLink). & (q8h0m1|qorh_spiol : 457.0) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) & (gnl|cdd|36412 : 224.0) no description available & (gnl|cdd|30949 : 198.0) no description available & (reliability: 962.0) & (original description: Putative At4g13010, Description = Putative quinone-oxidoreductase homolog, chloroplastic, PFAM = PF13602;PF08240)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf09846_155345-159813' '(q8h0m1|qorh_spiol : 415.0) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) & (at4g13010 : 408.0) Oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT1G23740.1); Has 34133 Blast hits to 33976 proteins in 2527 species: Archae - 549; Bacteria - 21108; Metazoa - 1143; Fungi - 3531; Plants - 1393; Viruses - 3; Other Eukaryotes - 6406 (source: NCBI BLink). & (gnl|cdd|36412 : 210.0) no description available & (gnl|cdd|30949 : 182.0) no description available & (reliability: 816.0) & (original description: Putative QOD1, Description = Quinone-oxidoreductase-like protein, PFAM = PF08240;PF13602)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf09846_162665-166243' '(at4g13010 : 436.0) Oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT1G23740.1); Has 34133 Blast hits to 33976 proteins in 2527 species: Archae - 549; Bacteria - 21108; Metazoa - 1143; Fungi - 3531; Plants - 1393; Viruses - 3; Other Eukaryotes - 6406 (source: NCBI BLink). & (q8h0m1|qorh_spiol : 429.0) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) & (gnl|cdd|36412 : 209.0) no description available & (gnl|cdd|30949 : 185.0) no description available & (reliability: 872.0) & (original description: Putative QOD1, Description = Quinone-oxidoreductase-like protein, PFAM = PF08240;PF13602)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf10326_159526-163676' '(at4g28720 : 650.0) Auxin biosynthetic gene regulated by RVE1. Overexpression leads to suppression of bri1 phenotype.; YUCCA 8 (YUC8); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: brassinosteroid mediated signaling pathway, auxin biosynthetic process; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G43890.1); Has 11557 Blast hits to 11539 proteins in 1628 species: Archae - 52; Bacteria - 6582; Metazoa - 787; Fungi - 1560; Plants - 663; Viruses - 0; Other Eukaryotes - 1913 (source: NCBI BLink). & (gnl|cdd|36613 : 306.0) no description available & (gnl|cdd|32255 : 184.0) no description available & (reliability: 1300.0) & (original description: Putative YUC8, Description = Probable indole-3-pyruvate monooxygenase YUCCA8, PFAM = PF00743)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf10336_401234-408293' '(at4g15760 : 360.0) Encodes a protein with similarity to monooxygenases that are known to degrade salicylic acid (SA).; monooxygenase 1 (MO1); FUNCTIONS IN: monooxygenase activity; INVOLVED IN: response to bacterium; LOCATED IN: endoplasmic reticulum; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT4G15765.1). & (gnl|cdd|37825 : 299.0) no description available & (gnl|cdd|30999 : 159.0) no description available & (reliability: 720.0) & (original description: Putative MO1, Description = Monooxygenase 1, PFAM = PF01494)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf10815_144079-147952' '(at4g28720 : 630.0) Auxin biosynthetic gene regulated by RVE1. Overexpression leads to suppression of bri1 phenotype.; YUCCA 8 (YUC8); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: brassinosteroid mediated signaling pathway, auxin biosynthetic process; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G43890.1); Has 11557 Blast hits to 11539 proteins in 1628 species: Archae - 52; Bacteria - 6582; Metazoa - 787; Fungi - 1560; Plants - 663; Viruses - 0; Other Eukaryotes - 1913 (source: NCBI BLink). & (gnl|cdd|36613 : 299.0) no description available & (gnl|cdd|32255 : 187.0) no description available & (reliability: 1260.0) & (original description: Putative YUC5, Description = Probable indole-3-pyruvate monooxygenase YUCCA5, PFAM = PF00743)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf11188_2677-6825' '(at1g21430 : 462.0) YUC11; FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: regulation of anatomical structure morphogenesis; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-containing monooxygenase family protein (TAIR:AT1G48910.1); Has 9762 Blast hits to 9749 proteins in 1331 species: Archae - 35; Bacteria - 5524; Metazoa - 772; Fungi - 1287; Plants - 602; Viruses - 0; Other Eukaryotes - 1542 (source: NCBI BLink). & (gnl|cdd|36613 : 211.0) no description available & (gnl|cdd|32255 : 145.0) no description available & (reliability: 924.0) & (original description: Putative YUC11, Description = Probable indole-3-pyruvate monooxygenase YUCCA11, PFAM = PF00743)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf11484_135895-141752' '(at4g38540 : 392.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT5G05320.1); Has 5392 Blast hits to 5382 proteins in 1070 species: Archae - 48; Bacteria - 3093; Metazoa - 5; Fungi - 1172; Plants - 539; Viruses - 0; Other Eukaryotes - 535 (source: NCBI BLink). & (gnl|cdd|37825 : 298.0) no description available & (gnl|cdd|30999 : 145.0) no description available & (reliability: 784.0) & (original description: Putative MO2, Description = FAD/NAD(P)-binding oxidoreductase family protein, PFAM = PF01494)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf11646_347846-351975' '(at1g04610 : 625.0) YUCCA 3 (YUC3); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: auxin biosynthetic process; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: YUCCA 7 (TAIR:AT2G33230.1); Has 9657 Blast hits to 9637 proteins in 1196 species: Archae - 33; Bacteria - 4899; Metazoa - 784; Fungi - 1494; Plants - 670; Viruses - 0; Other Eukaryotes - 1777 (source: NCBI BLink). & (gnl|cdd|36613 : 302.0) no description available & (gnl|cdd|32255 : 189.0) no description available & (reliability: 1250.0) & (original description: Putative YUC3, Description = Probable indole-3-pyruvate monooxygenase YUCCA3, PFAM = PF00743)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf13411_17069-26358' '(at2g43020 : 823.0) polyamine oxidase 2 (PAO2); FUNCTIONS IN: primary amine oxidase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Flavin-containing amine oxidase (InterPro:IPR001613); BEST Arabidopsis thaliana protein match is: polyamine oxidase 3 (TAIR:AT3G59050.1); Has 6381 Blast hits to 5960 proteins in 1057 species: Archae - 96; Bacteria - 2371; Metazoa - 1412; Fungi - 575; Plants - 752; Viruses - 0; Other Eukaryotes - 1175 (source: NCBI BLink). & (gnl|cdd|35252 : 455.0) no description available & (gnl|cdd|85554 : 261.0) no description available & (o64411|pao_maize : 142.0) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (reliability: 1646.0) & (original description: Putative PAO2, Description = Probable polyamine oxidase 2, PFAM = PF01593)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf14102_38398-41102' '(gnl|cdd|36410 : 364.0) no description available & (at5g16970 : 338.0) encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls; alkenal reductase (AER); FUNCTIONS IN: 2-alkenal reductase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G17000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32313 : 303.0) no description available & (reliability: 676.0) & (original description: Putative P1, Description = NADP-dependent alkenal double bond reductase P1, PFAM = PF16884;PF00107)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf15515_98910-104697' '(at1g12140 : 419.0) belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates; flavin-monooxygenase glucosinolate S-oxygenase 5 (FMO GS-OX5); CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase FMO (InterPro:IPR000960), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: flavin-monooxygenase glucosinolate S-oxygenase 3 (TAIR:AT1G62560.1); Has 11380 Blast hits to 10828 proteins in 1431 species: Archae - 28; Bacteria - 5328; Metazoa - 1193; Fungi - 1290; Plants - 802; Viruses - 0; Other Eukaryotes - 2739 (source: NCBI BLink). & (gnl|cdd|36613 : 383.0) no description available & (gnl|cdd|84997 : 149.0) no description available & (reliability: 838.0) & (original description: Putative FMO3, Description = Flavin-containing monooxygenase, PFAM = PF00743;PF00743)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf15645_267198-274666' '(at2g42490 : 1249.0) Copper amine oxidase family protein; FUNCTIONS IN: quinone binding, primary amine oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT3G43670.1); Has 1554 Blast hits to 1550 proteins in 277 species: Archae - 14; Bacteria - 379; Metazoa - 243; Fungi - 461; Plants - 232; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|83851 : 782.0) no description available & (gnl|cdd|36400 : 659.0) no description available & (q43077|amo_pea : 231.0) Amine oxidase [copper-containing] precursor (EC 1.4.3.6) - Pisum sativum (Garden pea) & (reliability: 2498.0) & (original description: Putative tynA, Description = Amine oxidase, PFAM = PF02727;PF02728;PF01179)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf16156_110590-118268' '(at5g66920 : 786.0) SKU5 similar 17 (sks17); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: response to karrikin; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 15 (TAIR:AT4G37160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36477 : 594.0) no description available & (p29162|ntp3_tobac : 567.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|87357 : 132.0) no description available & (reliability: 1572.0) & (original description: Putative sks17, Description = AT5g66920/MUD21_18, PFAM = PF07732;PF07731;PF00394)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf17294_32092-39102' '(at5g48450 : 390.0) Encodes a protein with two DUF26 domains and a signal peptide for secretion. The protein is transported to the apoplast when it is expressed as a GFP fusion protein.; SKU5 similar 3 (sks3); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT4G12420.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 390.0) no description available & (q00624|aso_brana : 340.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 129.0) no description available & (reliability: 778.0) & (original description: Putative sks3, Description = Multicopper oxidase, putative, PFAM = PF07732;PF07731;PF00394)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf17294_35163-40156' '(gnl|cdd|36477 : 319.0) no description available & (at1g21850 : 311.0) SKU5 similar 8 (sks8); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 7 (TAIR:AT1G21860.1); Has 5145 Blast hits to 5091 proteins in 951 species: Archae - 16; Bacteria - 1604; Metazoa - 263; Fungi - 1857; Plants - 1262; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (q00624|aso_brana : 273.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 105.0) no description available & (reliability: 622.0) & (original description: Putative sks3, Description = Monocopper oxidase-like protein SKU5, PFAM = PF07731;PF00394)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf17372_186993-195220' '(at1g56000 : 489.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT1G55980.1); Has 2116 Blast hits to 2116 proteins in 458 species: Archae - 21; Bacteria - 792; Metazoa - 16; Fungi - 22; Plants - 126; Viruses - 0; Other Eukaryotes - 1139 (source: NCBI BLink). & (gnl|cdd|33187 : 188.0) no description available & (reliability: 978.0) & (original description: Putative At1g56000, Description = AT1G56000 protein, PFAM = PF13450)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf17839_158505-170831' '(p29162|ntp3_tobac : 787.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (at1g55570 : 746.0) SKU5 similar 12 (sks12); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 11 (TAIR:AT3G13390.1); Has 5441 Blast hits to 5412 proteins in 1035 species: Archae - 18; Bacteria - 1816; Metazoa - 269; Fungi - 1918; Plants - 1254; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|36477 : 576.0) no description available & (gnl|cdd|87357 : 147.0) no description available & (reliability: 1492.0) & (original description: Putative p303, Description = L-ascorbate oxidase-like protein, PFAM = PF07731;PF00394;PF07732)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf19504_34869-39118' '(at1g55570 : 793.0) SKU5 similar 12 (sks12); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 11 (TAIR:AT3G13390.1); Has 5441 Blast hits to 5412 proteins in 1035 species: Archae - 18; Bacteria - 1816; Metazoa - 269; Fungi - 1918; Plants - 1254; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (p29162|ntp3_tobac : 786.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36477 : 575.0) no description available & (gnl|cdd|87357 : 144.0) no description available & (reliability: 1586.0) & (original description: Putative p303, Description = L-ascorbate oxidase-like protein, PFAM = PF00394;PF07732;PF07731)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf23821_13149-18766' '(at3g28480 : 430.0) Oxoglutarate/iron-dependent oxygenase; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123), Metridin-like ShK toxin (InterPro:IPR003582); BEST Arabidopsis thaliana protein match is: Oxoglutarate/iron-dependent oxygenase (TAIR:AT3G28490.1). & (gnl|cdd|36804 : 263.0) no description available & (gnl|cdd|47971 : 145.0) no description available & (reliability: 860.0) & (original description: Putative P4H7, Description = Probable prolyl 4-hydroxylase 7, PFAM = PF13640)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf34287_2302-7851' '(at4g22010 : 737.0) SKU5 similar 4 (sks4); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 5 (TAIR:AT1G76160.1); Has 5236 Blast hits to 5188 proteins in 961 species: Archae - 4; Bacteria - 1473; Metazoa - 274; Fungi - 2031; Plants - 1319; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|36477 : 600.0) no description available & (p29162|ntp3_tobac : 530.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|87357 : 141.0) no description available & (reliability: 1474.0) & (original description: Putative sks4, Description = L-ascorbate oxidase-like protein, PFAM = PF00394;PF07731;PF07732)' T '26.7' 'misc.oxidases - copper, flavone etc' 'niben101scf34287_11700-16691' '(at1g76160 : 786.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36477 : 612.0) no description available & (q00624|aso_brana : 554.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 145.0) no description available & (reliability: 1544.0) & (original description: Putative sks4, Description = L-ascorbate oxidase-like protein, PFAM = PF00394;PF07731;PF07732)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold335_1-2830' '(at3g27540 : 305.0) beta-1,4-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 17 (InterPro:IPR006813); BEST Arabidopsis thaliana protein match is: beta-1,4-N-acetylglucosaminyltransferase family protein (TAIR:AT5G14480.1); Has 1196 Blast hits to 1196 proteins in 92 species: Archae - 0; Bacteria - 43; Metazoa - 59; Fungi - 34; Plants - 126; Viruses - 4; Other Eukaryotes - 930 (source: NCBI BLink). & (gnl|cdd|68302 : 232.0) no description available & (reliability: 600.0) & (original description: Putative poGNT3, Description = Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase, PFAM = PF04724)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold2273_28873-35419' '(at2g23610 : 229.0) Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on methyl salicylate, MeGA4, or MEGA9 in vitro.; methyl esterase 3 (MES3); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 4 (TAIR:AT2G23580.1); Has 1894 Blast hits to 1892 proteins in 428 species: Archae - 2; Bacteria - 1086; Metazoa - 0; Fungi - 17; Plants - 628; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (q40708|pir7a_orysa : 227.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 458.0) & (original description: Putative SABP2, Description = Salicylic acid-binding protein 2, PFAM = PF12697)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold2564_40489-44599' '(at1g12990 : 657.0) beta-1,4-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 17 (InterPro:IPR006813); BEST Arabidopsis thaliana protein match is: beta-1,4-N-acetylglucosaminyltransferase family protein (TAIR:AT1G67880.1); Has 1071 Blast hits to 1070 proteins in 91 species: Archae - 0; Bacteria - 41; Metazoa - 59; Fungi - 34; Plants - 127; Viruses - 4; Other Eukaryotes - 806 (source: NCBI BLink). & (gnl|cdd|68302 : 566.0) no description available & (reliability: 1314.0) & (original description: Putative poGNT3, Description = Beta 1,4 N-acetylglucosaminyltransferase, PFAM = PF04724)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold12868_19461-23158' '(at5g44380 : 375.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: cell wall; EXPRESSED IN: shoot apex, hypocotyl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44390.1); Has 6276 Blast hits to 6099 proteins in 947 species: Archae - 86; Bacteria - 3186; Metazoa - 42; Fungi - 1722; Plants - 710; Viruses - 0; Other Eukaryotes - 530 (source: NCBI BLink). & (gnl|cdd|30625 : 103.0) no description available & (reliability: 750.0) & (original description: Putative T440, Description = Berberine bridge enzyme like protein, PFAM = PF08031;PF01565)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold15667_31731-37970' '(at5g06060 : 374.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|77008 : 268.0) no description available & (gnl|cdd|35944 : 242.0) no description available & (q75kh3|grdh_orysa : 104.0) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 748.0) & (original description: Putative trI, Description = NAD(P)-binding rossmann-fold protein, PFAM = PF13561)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold17248_212-5801' '(at2g29260 : 171.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G06060.1); Has 125944 Blast hits to 125708 proteins in 3633 species: Archae - 994; Bacteria - 82126; Metazoa - 5739; Fungi - 6481; Plants - 2838; Viruses - 5; Other Eukaryotes - 27761 (source: NCBI BLink). & (gnl|cdd|77008 : 145.0) no description available & (gnl|cdd|35944 : 137.0) no description available & (reliability: 342.0) & (original description: Putative tr, Description = Tropinone reductase I, PFAM = PF13561)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold21158_2085-32493' '(at3g29770 : 346.0) Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.; methyl esterase 11 (MES11); FUNCTIONS IN: hydrolase activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 13 (TAIR:AT1G26360.1); Has 2947 Blast hits to 2945 proteins in 736 species: Archae - 12; Bacteria - 1724; Metazoa - 69; Fungi - 61; Plants - 638; Viruses - 1; Other Eukaryotes - 442 (source: NCBI BLink). & (q40708|pir7a_orysa : 128.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 646.0) & (original description: Putative SP1L1, Description = Protein SPIRAL1-like 1, PFAM = PF00561)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold28158_14842-25147' '(at4g34880 : 272.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: acrylonitrile catabolic process, aldoxime metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT5G07360.2); Has 15395 Blast hits to 15313 proteins in 2409 species: Archae - 237; Bacteria - 9126; Metazoa - 385; Fungi - 509; Plants - 293; Viruses - 0; Other Eukaryotes - 4845 (source: NCBI BLink). & (gnl|cdd|82493 : 246.0) no description available & (gnl|cdd|36425 : 220.0) no description available & (reliability: 544.0) & (original description: Putative BnaA01g02320D, Description = BnaA01g02320D protein, PFAM = PF01425)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold33298_5283-8417' '(at4g20860 : 464.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44360.1); Has 5055 Blast hits to 4866 proteins in 819 species: Archae - 58; Bacteria - 2286; Metazoa - 6; Fungi - 1739; Plants - 670; Viruses - 0; Other Eukaryotes - 296 (source: NCBI BLink). & (gnl|cdd|30625 : 103.0) no description available & (reliability: 928.0) & (original description: Putative THBO, Description = Tetrahydroberberine oxidase, PFAM = PF01565;PF08031)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold43726_13892-17577' '(at5g44440 : 374.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: petal, embryo, sepal, pedicel, flower; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44410.1); Has 5428 Blast hits to 5278 proteins in 865 species: Archae - 39; Bacteria - 2703; Metazoa - 4; Fungi - 1714; Plants - 701; Viruses - 0; Other Eukaryotes - 267 (source: NCBI BLink). & (gnl|cdd|30625 : 104.0) no description available & (reliability: 748.0) & (original description: Putative BBE1, Description = Reticuline oxidase, PFAM = PF08031;PF01565)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold53099_1-14079' '(at5g13690 : 202.0) Encodes an enzyme that is predicted to act as an alpha-N-acetylglucosaminidase (NAGLU). An naglu mutant arrests early in seed development but does not appear to have male or female gametophytic defects. Transcript levels for this gene are increased during reproductive development.; CYCLOPS 1 (CYL1); FUNCTIONS IN: alpha-N-acetylglucosaminidase activity; INVOLVED IN: seed development; LOCATED IN: vacuole; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-N-acetylglucosaminidase (InterPro:IPR007781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68654 : 192.0) no description available & (gnl|cdd|37444 : 171.0) no description available & (reliability: 404.0) & (original description: Putative CYL1, Description = Alpha-N-acetylglucosaminidase, PFAM = PF05089)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold57416_919-10753' '(at5g13690 : 222.0) Encodes an enzyme that is predicted to act as an alpha-N-acetylglucosaminidase (NAGLU). An naglu mutant arrests early in seed development but does not appear to have male or female gametophytic defects. Transcript levels for this gene are increased during reproductive development.; CYCLOPS 1 (CYL1); FUNCTIONS IN: alpha-N-acetylglucosaminidase activity; INVOLVED IN: seed development; LOCATED IN: vacuole; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-N-acetylglucosaminidase (InterPro:IPR007781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68654 : 212.0) no description available & (gnl|cdd|37444 : 189.0) no description available & (reliability: 444.0) & (original description: Putative nglA, Description = Alpha-N-acetylglucosaminidase, PFAM = PF05089)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold68423_5038-8702' '(at4g20840 : 609.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: apoplast, plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT4G20830.2); Has 4588 Blast hits to 4445 proteins in 696 species: Archae - 38; Bacteria - 1910; Metazoa - 4; Fungi - 1681; Plants - 781; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (gnl|cdd|85533 : 107.0) no description available & (reliability: 1218.0) & (original description: Putative BBE1, Description = Berberine bridge enzyme, PFAM = PF08031;PF01565)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold70197_1598-9260' '(at4g09900 : 505.0) Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.; methyl esterase 12 (MES12); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 14 (TAIR:AT1G33990.1); Has 2424 Blast hits to 2424 proteins in 522 species: Archae - 7; Bacteria - 1330; Metazoa - 8; Fungi - 32; Plants - 631; Viruses - 0; Other Eukaryotes - 416 (source: NCBI BLink). & (q40708|pir7a_orysa : 141.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 990.0) & (original description: Putative MES12, Description = Putative methylesterase 12, chloroplastic, PFAM = PF12697)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold77305_1184-7707' '(at4g09900 : 479.0) Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.; methyl esterase 12 (MES12); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 14 (TAIR:AT1G33990.1); Has 2424 Blast hits to 2424 proteins in 522 species: Archae - 7; Bacteria - 1330; Metazoa - 8; Fungi - 32; Plants - 631; Viruses - 0; Other Eukaryotes - 416 (source: NCBI BLink). & (q40708|pir7a_orysa : 144.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 928.0) & (original description: Putative Sb07g001070, Description = Putative uncharacterized protein Sb07g001070, PFAM = PF12697)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.3scaffold113968_1-1657' '(at1g26360 : 185.0) Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco but no enzymatic activity has been identified for this protein.; methyl esterase 13 (MES13); FUNCTIONS IN: hydrolase activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 15 (TAIR:AT1G69240.1); Has 2167 Blast hits to 2165 proteins in 544 species: Archae - 4; Bacteria - 1224; Metazoa - 16; Fungi - 61; Plants - 637; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative RHS9, Description = Esterase PIR7B, putative, PFAM = )' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold106_854363-861604' '(at5g13690 : 162.0) Encodes an enzyme that is predicted to act as an alpha-N-acetylglucosaminidase (NAGLU). An naglu mutant arrests early in seed development but does not appear to have male or female gametophytic defects. Transcript levels for this gene are increased during reproductive development.; CYCLOPS 1 (CYL1); FUNCTIONS IN: alpha-N-acetylglucosaminidase activity; INVOLVED IN: seed development; LOCATED IN: vacuole; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-N-acetylglucosaminidase (InterPro:IPR007781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68654 : 162.0) no description available & (gnl|cdd|37444 : 133.0) no description available & (reliability: 324.0) & (original description: Putative naglu, Description = Alpha-N-acetylglucosaminidase, PFAM = PF05089)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold106_863913-867593' '(gnl|cdd|68654 : 259.0) no description available & (at5g13690 : 251.0) Encodes an enzyme that is predicted to act as an alpha-N-acetylglucosaminidase (NAGLU). An naglu mutant arrests early in seed development but does not appear to have male or female gametophytic defects. Transcript levels for this gene are increased during reproductive development.; CYCLOPS 1 (CYL1); FUNCTIONS IN: alpha-N-acetylglucosaminidase activity; INVOLVED IN: seed development; LOCATED IN: vacuole; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-N-acetylglucosaminidase (InterPro:IPR007781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37444 : 200.0) no description available & (reliability: 502.0) & (original description: Putative CYL1, Description = Alpha-N-acetylglucosaminidase, PFAM = PF12972)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold148_1014925-1018124' '(q42965|nrl4_tobac : 174.0) Nitrilase 4 (EC 3.5.5.1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36023 : 169.0) no description available & (at5g22300 : 168.0) encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway.; nitrilase 4 (NIT4); CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), Nitrilase/cyanide hydratase, conserved site (InterPro:IPR000132); BEST Arabidopsis thaliana protein match is: nitrilase 3 (TAIR:AT3G44320.1); Has 7653 Blast hits to 7575 proteins in 1747 species: Archae - 162; Bacteria - 5078; Metazoa - 407; Fungi - 539; Plants - 330; Viruses - 11; Other Eukaryotes - 1126 (source: NCBI BLink). & (gnl|cdd|85033 : 97.0) no description available & (reliability: 336.0) & (original description: Putative nIT4, Description = Nitrilase, PFAM = PF00795)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold393_53224-86032' '(at5g07360 : 781.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT3G25660.1); Has 19044 Blast hits to 19036 proteins in 2473 species: Archae - 260; Bacteria - 10805; Metazoa - 539; Fungi - 1354; Plants - 382; Viruses - 0; Other Eukaryotes - 5704 (source: NCBI BLink). & (gnl|cdd|85442 : 287.0) no description available & (gnl|cdd|36425 : 187.0) no description available & (reliability: 1562.0) & (original description: Putative A19, Description = Amidase-like protein, PFAM = PF01425)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold457_284347-295186' '(at5g06060 : 279.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35944 : 194.0) no description available & (gnl|cdd|77008 : 194.0) no description available & (q75kh3|grdh_orysa : 85.9) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 558.0) & (original description: Putative tr, Description = NAD(P)-binding rossmann-fold protein, PFAM = PF00106;PF13561)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold697_334947-338632' '(at5g44380 : 380.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: cell wall; EXPRESSED IN: shoot apex, hypocotyl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44390.1); Has 6276 Blast hits to 6099 proteins in 947 species: Archae - 86; Bacteria - 3186; Metazoa - 42; Fungi - 1722; Plants - 710; Viruses - 0; Other Eukaryotes - 530 (source: NCBI BLink). & (gnl|cdd|30625 : 106.0) no description available & (reliability: 760.0) & (original description: Putative bbe1, Description = Berberine bridge enzyme, PFAM = PF08031;PF01565)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold1122_744013-750706' '(at1g08980 : 468.0) Encodes an enzyme with similarity to bacterial acylamidohydrolases and exhibits indole-3-acetamide amidohydrolase activity in vitro. This enzyme may be involved in the in vivo biosynthesis of indole-acetic acid from indole-3-acetamide, a native metabolite of A. thaliana. It appears to exist as a monomer.; amidase 1 (AMI1); FUNCTIONS IN: amidase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, indoleacetamide hydrolase activity; INVOLVED IN: indoleacetic acid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: translocon at the outer membrane of chloroplasts 64-V (TAIR:AT5G09420.1); Has 18462 Blast hits to 18443 proteins in 2488 species: Archae - 262; Bacteria - 10888; Metazoa - 543; Fungi - 1390; Plants - 376; Viruses - 0; Other Eukaryotes - 5003 (source: NCBI BLink). & (gnl|cdd|76569 : 368.0) no description available & (gnl|cdd|36425 : 258.0) no description available & (reliability: 936.0) & (original description: Putative AMI1, Description = Amidase 1, PFAM = PF01425;PF01425)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold1204_468565-474760' '(at2g29260 : 406.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G06060.1); Has 125944 Blast hits to 125708 proteins in 3633 species: Archae - 994; Bacteria - 82126; Metazoa - 5739; Fungi - 6481; Plants - 2838; Viruses - 5; Other Eukaryotes - 27761 (source: NCBI BLink). & (gnl|cdd|77008 : 266.0) no description available & (gnl|cdd|35944 : 241.0) no description available & (q75kh3|grdh_orysa : 109.0) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 812.0) & (original description: Putative tr, Description = NAD(P)-binding rossmann-fold protein, PFAM = PF13561)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold1709_256605-267327' '(at5g07360 : 793.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT3G25660.1); Has 19044 Blast hits to 19036 proteins in 2473 species: Archae - 260; Bacteria - 10805; Metazoa - 539; Fungi - 1354; Plants - 382; Viruses - 0; Other Eukaryotes - 5704 (source: NCBI BLink). & (gnl|cdd|85442 : 294.0) no description available & (gnl|cdd|36425 : 204.0) no description available & (reliability: 1586.0) & (original description: Putative NP81, Description = Amidase family protein, PFAM = PF01425)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold2645_262763-276623' '(at4g34880 : 513.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: acrylonitrile catabolic process, aldoxime metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT5G07360.2); Has 15395 Blast hits to 15313 proteins in 2409 species: Archae - 237; Bacteria - 9126; Metazoa - 385; Fungi - 509; Plants - 293; Viruses - 0; Other Eukaryotes - 4845 (source: NCBI BLink). & (gnl|cdd|82493 : 387.0) no description available & (gnl|cdd|36425 : 294.0) no description available & (reliability: 1026.0) & (original description: Putative pam, Description = Peptide amidase, PFAM = PF01425)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold2882_50968-58441' '(at1g72970 : 814.0) Originally identified as a mutation that causes floral organs to fuse together. About 10-20% of mutants also have defects in ovules. Mutants have reduced fertility most likely as because of fusions that pistil emergence. The protein has similarity to the mandelonitrile lyase family of FAD containing oxidoreductases and is predicted to be secreted (SignalP).It is expressed in all tissue layers of roots, inflorescences, stems, leaves, and flowers and is also expressed in siliques. Expression is highest in inflorescence and flower tissue.Transmission of mutant alleles to the progeny shows non mendelian segregation- a percentage of mutant alleles revert back to a previous parental (e.g. grandparental) wild type allele. It has been suggested that an RNA template driven or other extra-DNA genomic mechanism may be responsible for the non-mendelian inheritance of HTH. Reversion events in alleles at other loci have also been observed to occur in plants with an hth mutant background indicating a genome wide effect.; HOTHEAD (HTH); CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT1G12570.1); Has 1244 Blast hits to 1228 proteins in 249 species: Archae - 2; Bacteria - 759; Metazoa - 27; Fungi - 277; Plants - 135; Viruses - 3; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|36452 : 519.0) no description available & (gnl|cdd|32458 : 190.0) no description available & (reliability: 1628.0) & (original description: Putative HTH, Description = Protein HOTHEAD, PFAM = PF00732;PF05199)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold3142_188003-195091' '(at5g07360 : 777.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT3G25660.1); Has 19044 Blast hits to 19036 proteins in 2473 species: Archae - 260; Bacteria - 10805; Metazoa - 539; Fungi - 1354; Plants - 382; Viruses - 0; Other Eukaryotes - 5704 (source: NCBI BLink). & (gnl|cdd|85442 : 286.0) no description available & (gnl|cdd|36425 : 167.0) no description available & (reliability: 1554.0) & (original description: Putative gatA, Description = Amidase, PFAM = PF01425)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold3358_5761-9741' '(at5g06060 : 326.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|77008 : 247.0) no description available & (gnl|cdd|35944 : 217.0) no description available & (q75kh3|grdh_orysa : 99.4) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 652.0) & (original description: Putative trI, Description = Tropinone reductase, PFAM = PF13561)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'nbv0.5scaffold3790_39823-42712' '(at2g23610 : 221.0) Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on methyl salicylate, MeGA4, or MEGA9 in vitro.; methyl esterase 3 (MES3); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 4 (TAIR:AT2G23580.1); Has 1894 Blast hits to 1892 proteins in 428 species: Archae - 2; Bacteria - 1086; Metazoa - 0; Fungi - 17; Plants - 628; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (q40708|pir7a_orysa : 196.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 442.0) & (original description: Putative SABP2, Description = Salicylic acid-binding protein 2, PFAM = PF12697)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben044scf00004679ctg015_4026-10773' '(at5g07360 : 782.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT3G25660.1); Has 19044 Blast hits to 19036 proteins in 2473 species: Archae - 260; Bacteria - 10805; Metazoa - 539; Fungi - 1354; Plants - 382; Viruses - 0; Other Eukaryotes - 5704 (source: NCBI BLink). & (gnl|cdd|85442 : 287.0) no description available & (gnl|cdd|36425 : 186.0) no description available & (reliability: 1564.0) & (original description: Putative A19, Description = Amidase-like protein, PFAM = PF01425)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben044scf00011453ctg001_31952-38623' '(at5g06060 : 372.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|77008 : 272.0) no description available & (gnl|cdd|35944 : 241.0) no description available & (q75kh3|grdh_orysa : 103.0) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 744.0) & (original description: Putative trI, Description = NAD(P)-binding rossmann-fold protein, PFAM = PF13561)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben044scf00018124ctg006_1114-9641' '(at5g13690 : 580.0) Encodes an enzyme that is predicted to act as an alpha-N-acetylglucosaminidase (NAGLU). An naglu mutant arrests early in seed development but does not appear to have male or female gametophytic defects. Transcript levels for this gene are increased during reproductive development.; CYCLOPS 1 (CYL1); FUNCTIONS IN: alpha-N-acetylglucosaminidase activity; INVOLVED IN: seed development; LOCATED IN: vacuole; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-N-acetylglucosaminidase (InterPro:IPR007781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68654 : 551.0) no description available & (gnl|cdd|37444 : 425.0) no description available & (reliability: 1160.0) & (original description: Putative CYL1, Description = Alpha-N-acetylglucosaminidase, PFAM = PF05089;PF12972)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben044scf00022646ctg004_7329-9767' '(at2g23610 : 216.0) Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on methyl salicylate, MeGA4, or MEGA9 in vitro.; methyl esterase 3 (MES3); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 4 (TAIR:AT2G23580.1); Has 1894 Blast hits to 1892 proteins in 428 species: Archae - 2; Bacteria - 1086; Metazoa - 0; Fungi - 17; Plants - 628; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (q40708|pir7a_orysa : 200.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 432.0) & (original description: Putative MES3, Description = Methylesterase 3, PFAM = PF12697)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben044scf00032865ctg005_266-3889' '(at1g44820 : 431.0) Peptidase M20/M25/M40 family protein; FUNCTIONS IN: hydrolase activity, aminoacylase activity; INVOLVED IN: metabolic process, cellular amino acid metabolic process; LOCATED IN: endomembrane system, cytoplasm; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), N-acyl-L-amino-acid amidohydrolase (InterPro:IPR010159); BEST Arabidopsis thaliana protein match is: Peptidase M20/M25/M40 family protein (TAIR:AT1G44180.1); Has 5585 Blast hits to 5583 proteins in 1537 species: Archae - 130; Bacteria - 3721; Metazoa - 430; Fungi - 258; Plants - 102; Viruses - 2; Other Eukaryotes - 942 (source: NCBI BLink). & (gnl|cdd|37486 : 329.0) no description available & (gnl|cdd|30969 : 107.0) no description available & (reliability: 862.0) & (original description: Putative acy1, Description = Aminoacylase-1, PFAM = PF01546)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben044scf00033131ctg005_13716-17305' '(at5g44440 : 508.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: petal, embryo, sepal, pedicel, flower; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44410.1); Has 5428 Blast hits to 5278 proteins in 865 species: Archae - 39; Bacteria - 2703; Metazoa - 4; Fungi - 1714; Plants - 701; Viruses - 0; Other Eukaryotes - 267 (source: NCBI BLink). & (gnl|cdd|30625 : 128.0) no description available & (reliability: 1016.0) & (original description: Putative THBO, Description = Tetrahydroberberine oxidase, PFAM = PF08031;PF01565)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben044scf00039424ctg007_3283-12766' '(at1g72970 : 799.0) Originally identified as a mutation that causes floral organs to fuse together. About 10-20% of mutants also have defects in ovules. Mutants have reduced fertility most likely as because of fusions that pistil emergence. The protein has similarity to the mandelonitrile lyase family of FAD containing oxidoreductases and is predicted to be secreted (SignalP).It is expressed in all tissue layers of roots, inflorescences, stems, leaves, and flowers and is also expressed in siliques. Expression is highest in inflorescence and flower tissue.Transmission of mutant alleles to the progeny shows non mendelian segregation- a percentage of mutant alleles revert back to a previous parental (e.g. grandparental) wild type allele. It has been suggested that an RNA template driven or other extra-DNA genomic mechanism may be responsible for the non-mendelian inheritance of HTH. Reversion events in alleles at other loci have also been observed to occur in plants with an hth mutant background indicating a genome wide effect.; HOTHEAD (HTH); CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT1G12570.1); Has 1244 Blast hits to 1228 proteins in 249 species: Archae - 2; Bacteria - 759; Metazoa - 27; Fungi - 277; Plants - 135; Viruses - 3; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|36452 : 507.0) no description available & (gnl|cdd|32458 : 176.0) no description available & (reliability: 1598.0) & (original description: Putative HTH, Description = Protein HOTHEAD, PFAM = PF00732;PF05199)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf00034_64571-74404' '(at2g23620 : 314.0) Encodes a protein shown to have carboxylesterase activity, methyl salicylate esterase activity, methyl jasmonate esterase activity, and methyl IAA esterase activity in vitro. MES1 appears to be involved in MeSA hydrolysis in planta. Expression of MES1 can restore systemic acquired resistance in SAR-deficient tobacco plants. This protein does not act on MeGA4, or MEGA9 in vitro.; methyl esterase 1 (MES1); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: acetone-cyanohydrin lyase (TAIR:AT2G23600.1); Has 1884 Blast hits to 1883 proteins in 431 species: Archae - 2; Bacteria - 1054; Metazoa - 5; Fungi - 43; Plants - 631; Viruses - 0; Other Eukaryotes - 149 (source: NCBI BLink). & (p52704|hnl_hevbr : 228.0) (S)-acetone-cyanohydrin lyase (EC 4.1.2.39) ((S)-hydroxynitrile lyase) ((S)-hydroxynitrilase) (Oxynitrilase) - Hevea brasiliensis (Para rubber tree) & (reliability: 628.0) & (original description: Putative SABP2, Description = Salicylic acid-binding protein 2, PFAM = PF12697)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf00039_114783-118480' '(at5g44380 : 380.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: cell wall; EXPRESSED IN: shoot apex, hypocotyl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44390.1); Has 6276 Blast hits to 6099 proteins in 947 species: Archae - 86; Bacteria - 3186; Metazoa - 42; Fungi - 1722; Plants - 710; Viruses - 0; Other Eukaryotes - 530 (source: NCBI BLink). & (gnl|cdd|30625 : 107.0) no description available & (reliability: 760.0) & (original description: Putative bbe1, Description = Berberine bridge enzyme, PFAM = PF01565;PF08031)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf00116_594805-598427' '(at4g20860 : 511.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44360.1); Has 5055 Blast hits to 4866 proteins in 819 species: Archae - 58; Bacteria - 2286; Metazoa - 6; Fungi - 1739; Plants - 670; Viruses - 0; Other Eukaryotes - 296 (source: NCBI BLink). & (gnl|cdd|30625 : 105.0) no description available & (reliability: 1022.0) & (original description: Putative ADOX1, Description = FAD-dependent oxidoreductase, PFAM = PF01565;PF08031)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf00116_595283-638549' '(at4g20860 : 460.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44360.1); Has 5055 Blast hits to 4866 proteins in 819 species: Archae - 58; Bacteria - 2286; Metazoa - 6; Fungi - 1739; Plants - 670; Viruses - 0; Other Eukaryotes - 296 (source: NCBI BLink). & (gnl|cdd|85533 : 101.0) no description available & (reliability: 920.0) & (original description: Putative THBO, Description = Reticuline oxidase-like protein, PFAM = PF08031;PF01565)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf00116_615818-619416' '(at4g20860 : 494.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44360.1); Has 5055 Blast hits to 4866 proteins in 819 species: Archae - 58; Bacteria - 2286; Metazoa - 6; Fungi - 1739; Plants - 670; Viruses - 0; Other Eukaryotes - 296 (source: NCBI BLink). & (gnl|cdd|30625 : 110.0) no description available & (reliability: 988.0) & (original description: Putative THBO, Description = Reticuline oxidase-like protein, PFAM = PF08031;PF01565)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf00211_151477-156190' '(at4g34880 : 459.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: acrylonitrile catabolic process, aldoxime metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT5G07360.2); Has 15395 Blast hits to 15313 proteins in 2409 species: Archae - 237; Bacteria - 9126; Metazoa - 385; Fungi - 509; Plants - 293; Viruses - 0; Other Eukaryotes - 4845 (source: NCBI BLink). & (gnl|cdd|82493 : 397.0) no description available & (gnl|cdd|36425 : 301.0) no description available & (reliability: 918.0) & (original description: Putative amiE, Description = Amidase (AmiE), PFAM = PF01425)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf00271_777525-780674' '(at2g34790 : 617.0) MATERNAL EFFECT EMBRYO ARREST 23 (MEE23); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: polar nucleus fusion, embryo development ending in seed dormancy; LOCATED IN: cell wall; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT1G30760.1); Has 4988 Blast hits to 4831 proteins in 776 species: Archae - 82; Bacteria - 2407; Metazoa - 5; Fungi - 1644; Plants - 646; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink). & (gnl|cdd|30625 : 101.0) no description available & (reliability: 1234.0) & (original description: Putative THBO, Description = Tetrahydroberberine oxidase, PFAM = PF08031;PF01565)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf00343_894681-898243' '(at5g44440 : 510.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: petal, embryo, sepal, pedicel, flower; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44410.1); Has 5428 Blast hits to 5278 proteins in 865 species: Archae - 39; Bacteria - 2703; Metazoa - 4; Fungi - 1714; Plants - 701; Viruses - 0; Other Eukaryotes - 267 (source: NCBI BLink). & (gnl|cdd|30625 : 118.0) no description available & (reliability: 1020.0) & (original description: Putative NEC5a, Description = Nectarin 5a, PFAM = PF01565;PF08031)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf00681_42826-47094' '(at3g27540 : 630.0) beta-1,4-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 17 (InterPro:IPR006813); BEST Arabidopsis thaliana protein match is: beta-1,4-N-acetylglucosaminyltransferase family protein (TAIR:AT5G14480.1); Has 1196 Blast hits to 1196 proteins in 92 species: Archae - 0; Bacteria - 43; Metazoa - 59; Fungi - 34; Plants - 126; Viruses - 4; Other Eukaryotes - 930 (source: NCBI BLink). & (gnl|cdd|68302 : 536.0) no description available & (reliability: 1248.0) & (original description: Putative poGNT3, Description = Beta 1,4 N-acetylglucosaminyltransferase, PFAM = PF04724)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf00822_93296-101527' '(at5g06060 : 373.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|77008 : 273.0) no description available & (gnl|cdd|35944 : 243.0) no description available & (q75kh3|grdh_orysa : 104.0) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 746.0) & (original description: Putative trI, Description = NAD(P)-binding rossmann-fold protein, PFAM = PF13561)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf00869_98070-135059' '(at5g13690 : 1148.0) Encodes an enzyme that is predicted to act as an alpha-N-acetylglucosaminidase (NAGLU). An naglu mutant arrests early in seed development but does not appear to have male or female gametophytic defects. Transcript levels for this gene are increased during reproductive development.; CYCLOPS 1 (CYL1); FUNCTIONS IN: alpha-N-acetylglucosaminidase activity; INVOLVED IN: seed development; LOCATED IN: vacuole; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-N-acetylglucosaminidase (InterPro:IPR007781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68654 : 1014.0) no description available & (gnl|cdd|37444 : 828.0) no description available & (reliability: 2296.0) & (original description: Putative NAGLU, Description = Alpha-N-acetylglucosaminidase, PFAM = PF05089;PF12972;PF12971)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf00944_88388-91989' '(at5g44440 : 542.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: petal, embryo, sepal, pedicel, flower; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44410.1); Has 5428 Blast hits to 5278 proteins in 865 species: Archae - 39; Bacteria - 2703; Metazoa - 4; Fungi - 1714; Plants - 701; Viruses - 0; Other Eukaryotes - 267 (source: NCBI BLink). & (gnl|cdd|30625 : 118.0) no description available & (reliability: 1084.0) & (original description: Putative THBO, Description = Tetrahydroberberine oxidase, PFAM = PF08031;PF01565)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01060_73528-77168' '(at5g44400 : 613.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: cell wall; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44390.1); Has 6440 Blast hits to 6338 proteins in 980 species: Archae - 110; Bacteria - 3349; Metazoa - 50; Fungi - 1662; Plants - 680; Viruses - 0; Other Eukaryotes - 589 (source: NCBI BLink). & (gnl|cdd|30625 : 106.0) no description available & (reliability: 1226.0) & (original description: Putative THBO, Description = Reticuline oxidase-like protein, PFAM = PF01565;PF08031)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01061_712196-715791' '(at1g30700 : 594.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: stem, hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT1G30710.1); Has 4734 Blast hits to 4686 proteins in 819 species: Archae - 47; Bacteria - 2248; Metazoa - 0; Fungi - 1602; Plants - 666; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|85533 : 97.2) no description available & (reliability: 1188.0) & (original description: Putative At4g20830, Description = Reticuline oxidase-like protein, PFAM = PF01565;PF08031)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01061_781598-785160' '(at4g20860 : 507.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44360.1); Has 5055 Blast hits to 4866 proteins in 819 species: Archae - 58; Bacteria - 2286; Metazoa - 6; Fungi - 1739; Plants - 670; Viruses - 0; Other Eukaryotes - 296 (source: NCBI BLink). & (gnl|cdd|30625 : 110.0) no description available & (reliability: 1014.0) & (original description: Putative THBO, Description = Tetrahydroberberine oxidase, PFAM = PF08031;PF01565)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01281_6431-16087' '(at4g20840 : 613.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: apoplast, plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT4G20830.2); Has 4588 Blast hits to 4445 proteins in 696 species: Archae - 38; Bacteria - 1910; Metazoa - 4; Fungi - 1681; Plants - 781; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (gnl|cdd|85533 : 105.0) no description available & (reliability: 1226.0) & (original description: Putative At4g20830, Description = Reticuline oxidase-like protein, PFAM = PF01565;PF08031)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01395_266862-270502' '(at1g30760 : 644.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, root, flower, pedicel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT2G34790.1); Has 5139 Blast hits to 5066 proteins in 829 species: Archae - 62; Bacteria - 2468; Metazoa - 28; Fungi - 1653; Plants - 688; Viruses - 0; Other Eukaryotes - 240 (source: NCBI BLink). & (gnl|cdd|30625 : 102.0) no description available & (reliability: 1288.0) & (original description: Putative MEE23, Description = FAD-binding and BBE domain-containing protein, PFAM = PF08031;PF01565)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01395_294148-297743' '(at1g30700 : 581.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: stem, hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT1G30710.1); Has 4734 Blast hits to 4686 proteins in 819 species: Archae - 47; Bacteria - 2248; Metazoa - 0; Fungi - 1602; Plants - 666; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|85533 : 101.0) no description available & (reliability: 1162.0) & (original description: Putative BBE1, Description = Reticuline oxidase-like protein, PFAM = PF01565;PF08031)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01395_354902-374260' '(at1g30760 : 409.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, root, flower, pedicel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT2G34790.1); Has 5139 Blast hits to 5066 proteins in 829 species: Archae - 62; Bacteria - 2468; Metazoa - 28; Fungi - 1653; Plants - 688; Viruses - 0; Other Eukaryotes - 240 (source: NCBI BLink). & (gnl|cdd|30625 : 99.2) no description available & (reliability: 818.0) & (original description: Putative BBE1, Description = Reticuline oxidase-like protein, PFAM = PF08031;PF01565)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01395_370986-374578' '(at1g30760 : 466.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, root, flower, pedicel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT2G34790.1); Has 5139 Blast hits to 5066 proteins in 829 species: Archae - 62; Bacteria - 2468; Metazoa - 28; Fungi - 1653; Plants - 688; Viruses - 0; Other Eukaryotes - 240 (source: NCBI BLink). & (gnl|cdd|30625 : 128.0) no description available & (reliability: 932.0) & (original description: Putative THBO, Description = Reticuline oxidase-like protein, PFAM = PF01565;PF08031)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01505_242739-253927' '(at1g72970 : 795.0) Originally identified as a mutation that causes floral organs to fuse together. About 10-20% of mutants also have defects in ovules. Mutants have reduced fertility most likely as because of fusions that pistil emergence. The protein has similarity to the mandelonitrile lyase family of FAD containing oxidoreductases and is predicted to be secreted (SignalP).It is expressed in all tissue layers of roots, inflorescences, stems, leaves, and flowers and is also expressed in siliques. Expression is highest in inflorescence and flower tissue.Transmission of mutant alleles to the progeny shows non mendelian segregation- a percentage of mutant alleles revert back to a previous parental (e.g. grandparental) wild type allele. It has been suggested that an RNA template driven or other extra-DNA genomic mechanism may be responsible for the non-mendelian inheritance of HTH. Reversion events in alleles at other loci have also been observed to occur in plants with an hth mutant background indicating a genome wide effect.; HOTHEAD (HTH); CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT1G12570.1); Has 1244 Blast hits to 1228 proteins in 249 species: Archae - 2; Bacteria - 759; Metazoa - 27; Fungi - 277; Plants - 135; Viruses - 3; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|36452 : 507.0) no description available & (gnl|cdd|32458 : 176.0) no description available & (reliability: 1590.0) & (original description: Putative HTH, Description = Protein HOTHEAD, PFAM = PF05199;PF00732)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01521_69424-73886' '(at1g26360 : 375.0) Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco but no enzymatic activity has been identified for this protein.; methyl esterase 13 (MES13); FUNCTIONS IN: hydrolase activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 15 (TAIR:AT1G69240.1); Has 2167 Blast hits to 2165 proteins in 544 species: Archae - 4; Bacteria - 1224; Metazoa - 16; Fungi - 61; Plants - 637; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (q40708|pir7a_orysa : 150.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 724.0) & (original description: Putative MES11, Description = Putative methylesterase 11, chloroplastic, PFAM = PF12697)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01596_1093564-1101284' '(at5g07360 : 779.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT3G25660.1); Has 19044 Blast hits to 19036 proteins in 2473 species: Archae - 260; Bacteria - 10805; Metazoa - 539; Fungi - 1354; Plants - 382; Viruses - 0; Other Eukaryotes - 5704 (source: NCBI BLink). & (gnl|cdd|85442 : 286.0) no description available & (gnl|cdd|36425 : 168.0) no description available & (reliability: 1558.0) & (original description: Putative gatA, Description = Glutamyl-tRNA(Gln) amidotransferase subunit A, PFAM = PF01425)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01748_376506-379671' '(at1g30700 : 389.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: stem, hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT1G30710.1); Has 4734 Blast hits to 4686 proteins in 819 species: Archae - 47; Bacteria - 2248; Metazoa - 0; Fungi - 1602; Plants - 666; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|85533 : 91.4) no description available & (reliability: 778.0) & (original description: Putative BBE1, Description = Reticuline oxidase-like protein, PFAM = PF01565)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01847_574475-580146' '(at4g34880 : 467.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: acrylonitrile catabolic process, aldoxime metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT5G07360.2); Has 15395 Blast hits to 15313 proteins in 2409 species: Archae - 237; Bacteria - 9126; Metazoa - 385; Fungi - 509; Plants - 293; Viruses - 0; Other Eukaryotes - 4845 (source: NCBI BLink). & (gnl|cdd|82493 : 367.0) no description available & (gnl|cdd|36425 : 287.0) no description available & (reliability: 934.0) & (original description: Putative pam, Description = Amidase, PFAM = PF01425)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf01986_240563-243391' '(gnl|cdd|68654 : 265.0) no description available & (at5g13690 : 255.0) Encodes an enzyme that is predicted to act as an alpha-N-acetylglucosaminidase (NAGLU). An naglu mutant arrests early in seed development but does not appear to have male or female gametophytic defects. Transcript levels for this gene are increased during reproductive development.; CYCLOPS 1 (CYL1); FUNCTIONS IN: alpha-N-acetylglucosaminidase activity; INVOLVED IN: seed development; LOCATED IN: vacuole; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-N-acetylglucosaminidase (InterPro:IPR007781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37444 : 204.0) no description available & (reliability: 510.0) & (original description: Putative CYL1, Description = Alpha-N-acetylglucosaminidase, PFAM = PF12972)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf02289_569483-1151428' '(at3g29770 : 390.0) Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.; methyl esterase 11 (MES11); FUNCTIONS IN: hydrolase activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 13 (TAIR:AT1G26360.1); Has 2947 Blast hits to 2945 proteins in 736 species: Archae - 12; Bacteria - 1724; Metazoa - 69; Fungi - 61; Plants - 638; Viruses - 1; Other Eukaryotes - 442 (source: NCBI BLink). & (q40708|pir7a_orysa : 159.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 750.0) & (original description: Putative RHS9, Description = Esterase PIR7B, putative, PFAM = PF12697)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf02406_411931-415283' '(at2g23610 : 218.0) Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on methyl salicylate, MeGA4, or MEGA9 in vitro.; methyl esterase 3 (MES3); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 4 (TAIR:AT2G23580.1); Has 1894 Blast hits to 1892 proteins in 428 species: Archae - 2; Bacteria - 1086; Metazoa - 0; Fungi - 17; Plants - 628; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (q40708|pir7a_orysa : 197.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 436.0) & (original description: Putative MES8, Description = Methylesterase 8, PFAM = PF12697)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf02650_374733-381029' '(at5g06060 : 327.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35944 : 218.0) no description available & (gnl|cdd|77008 : 200.0) no description available & (reliability: 654.0) & (original description: Putative tr, Description = NAD(P)-binding rossmann-fold protein, PFAM = PF13561;PF00106)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf02831_817457-833129' '(at1g72970 : 820.0) Originally identified as a mutation that causes floral organs to fuse together. About 10-20% of mutants also have defects in ovules. Mutants have reduced fertility most likely as because of fusions that pistil emergence. The protein has similarity to the mandelonitrile lyase family of FAD containing oxidoreductases and is predicted to be secreted (SignalP).It is expressed in all tissue layers of roots, inflorescences, stems, leaves, and flowers and is also expressed in siliques. Expression is highest in inflorescence and flower tissue.Transmission of mutant alleles to the progeny shows non mendelian segregation- a percentage of mutant alleles revert back to a previous parental (e.g. grandparental) wild type allele. It has been suggested that an RNA template driven or other extra-DNA genomic mechanism may be responsible for the non-mendelian inheritance of HTH. Reversion events in alleles at other loci have also been observed to occur in plants with an hth mutant background indicating a genome wide effect.; HOTHEAD (HTH); CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT1G12570.1); Has 1244 Blast hits to 1228 proteins in 249 species: Archae - 2; Bacteria - 759; Metazoa - 27; Fungi - 277; Plants - 135; Viruses - 3; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|36452 : 517.0) no description available & (gnl|cdd|32458 : 186.0) no description available & (reliability: 1640.0) & (original description: Putative HTH, Description = Protein HOTHEAD, PFAM = PF00732;PF05199)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf03045_1734517-1738809' '(at1g12990 : 661.0) beta-1,4-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 17 (InterPro:IPR006813); BEST Arabidopsis thaliana protein match is: beta-1,4-N-acetylglucosaminyltransferase family protein (TAIR:AT1G67880.1); Has 1071 Blast hits to 1070 proteins in 91 species: Archae - 0; Bacteria - 41; Metazoa - 59; Fungi - 34; Plants - 127; Viruses - 4; Other Eukaryotes - 806 (source: NCBI BLink). & (gnl|cdd|68302 : 572.0) no description available & (reliability: 1322.0) & (original description: Putative poGNT3, Description = Beta 1,4 N-acetylglucosaminyltransferase, PFAM = PF04724)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf03080_400376-403492' '(at3g50440 : 214.0) Encodes a protein shown to have methyl jasmonate esterase activity in vitro. This protein does not act on methyl IAA, MeSA, MeGA4, or MEGA9 in vitro.; methyl esterase 10 (MES10); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 1 (TAIR:AT2G23620.1); Has 1602 Blast hits to 1600 proteins in 360 species: Archae - 4; Bacteria - 838; Metazoa - 1; Fungi - 25; Plants - 612; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (q40708|pir7a_orysa : 202.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 412.0) & (original description: Putative SABP2, Description = Salicylic acid-binding protein 2, PFAM = PF12697)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf03143_524911-541888' '(at1g12990 : 657.0) beta-1,4-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 17 (InterPro:IPR006813); BEST Arabidopsis thaliana protein match is: beta-1,4-N-acetylglucosaminyltransferase family protein (TAIR:AT1G67880.1); Has 1071 Blast hits to 1070 proteins in 91 species: Archae - 0; Bacteria - 41; Metazoa - 59; Fungi - 34; Plants - 127; Viruses - 4; Other Eukaryotes - 806 (source: NCBI BLink). & (gnl|cdd|68302 : 567.0) no description available & (reliability: 1314.0) & (original description: Putative poGNT3, Description = Beta 1,4 N-acetylglucosaminyltransferase, PFAM = PF04724)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf03777_94746-101493' '(at5g07360 : 785.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT3G25660.1); Has 19044 Blast hits to 19036 proteins in 2473 species: Archae - 260; Bacteria - 10805; Metazoa - 539; Fungi - 1354; Plants - 382; Viruses - 0; Other Eukaryotes - 5704 (source: NCBI BLink). & (gnl|cdd|85442 : 288.0) no description available & (gnl|cdd|36425 : 187.0) no description available & (reliability: 1570.0) & (original description: Putative amiD, Description = Amidase, PFAM = PF01425)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf03941_215174-233543' '(q42965|nrl4_tobac : 655.0) Nitrilase 4 (EC 3.5.5.1) - Nicotiana tabacum (Common tobacco) & (at5g22300 : 561.0) encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway.; nitrilase 4 (NIT4); CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), Nitrilase/cyanide hydratase, conserved site (InterPro:IPR000132); BEST Arabidopsis thaliana protein match is: nitrilase 3 (TAIR:AT3G44320.1); Has 7653 Blast hits to 7575 proteins in 1747 species: Archae - 162; Bacteria - 5078; Metazoa - 407; Fungi - 539; Plants - 330; Viruses - 11; Other Eukaryotes - 1126 (source: NCBI BLink). & (gnl|cdd|36023 : 535.0) no description available & (gnl|cdd|85033 : 167.0) no description available & (reliability: 1122.0) & (original description: Putative NIT4A, Description = Bifunctional nitrilase/nitrile hydratase NIT4A, PFAM = PF00795)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf03949_116844-120541' '(at4g20860 : 382.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44360.1); Has 5055 Blast hits to 4866 proteins in 819 species: Archae - 58; Bacteria - 2286; Metazoa - 6; Fungi - 1739; Plants - 670; Viruses - 0; Other Eukaryotes - 296 (source: NCBI BLink). & (gnl|cdd|85533 : 107.0) no description available & (reliability: 764.0) & (original description: Putative bbe1, Description = Berberine bridge enzyme, PFAM = PF08031;PF01565)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf04115_80875-88797' '(at4g09900 : 488.0) Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.; methyl esterase 12 (MES12); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 14 (TAIR:AT1G33990.1); Has 2424 Blast hits to 2424 proteins in 522 species: Archae - 7; Bacteria - 1330; Metazoa - 8; Fungi - 32; Plants - 631; Viruses - 0; Other Eukaryotes - 416 (source: NCBI BLink). & (q40708|pir7a_orysa : 142.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 954.0) & (original description: Putative MES12, Description = Putative methylesterase 12, chloroplastic, PFAM = PF12697)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf04243_49075-54086' '(at5g06060 : 301.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35944 : 237.0) no description available & (gnl|cdd|77008 : 215.0) no description available & (q75kh3|grdh_orysa : 89.0) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 602.0) & (original description: Putative TR1, Description = Tropinone reductase 1, PFAM = PF13561)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf04403_47197-51919' '(at3g29770 : 348.0) Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.; methyl esterase 11 (MES11); FUNCTIONS IN: hydrolase activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 13 (TAIR:AT1G26360.1); Has 2947 Blast hits to 2945 proteins in 736 species: Archae - 12; Bacteria - 1724; Metazoa - 69; Fungi - 61; Plants - 638; Viruses - 1; Other Eukaryotes - 442 (source: NCBI BLink). & (q40708|pir7a_orysa : 136.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 686.0) & (original description: Putative MES11, Description = Putative methylesterase 11, chloroplastic, PFAM = PF12697)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf05278_53268-59538' '(at2g29260 : 409.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G06060.1); Has 125944 Blast hits to 125708 proteins in 3633 species: Archae - 994; Bacteria - 82126; Metazoa - 5739; Fungi - 6481; Plants - 2838; Viruses - 5; Other Eukaryotes - 27761 (source: NCBI BLink). & (gnl|cdd|77008 : 266.0) no description available & (gnl|cdd|35944 : 244.0) no description available & (q75kh3|grdh_orysa : 109.0) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 818.0) & (original description: Putative tr, Description = NAD(P)-binding rossmann-fold protein, PFAM = PF13561)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf05767_722644-729422' '(at4g34880 : 451.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: acrylonitrile catabolic process, aldoxime metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT5G07360.2); Has 15395 Blast hits to 15313 proteins in 2409 species: Archae - 237; Bacteria - 9126; Metazoa - 385; Fungi - 509; Plants - 293; Viruses - 0; Other Eukaryotes - 4845 (source: NCBI BLink). & (gnl|cdd|82493 : 379.0) no description available & (gnl|cdd|36425 : 300.0) no description available & (reliability: 902.0) & (original description: Putative pam, Description = Amidase, PFAM = PF01425)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf05980_145070-151395' '(at5g06060 : 296.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35944 : 218.0) no description available & (gnl|cdd|77008 : 218.0) no description available & (q75kh3|grdh_orysa : 98.6) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 592.0) & (original description: Putative tr, Description = NAD(P)-binding rossmann-fold protein, PFAM = PF13561)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf06483_31316-35512' '(at1g30760 : 678.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, root, flower, pedicel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT2G34790.1); Has 5139 Blast hits to 5066 proteins in 829 species: Archae - 62; Bacteria - 2468; Metazoa - 28; Fungi - 1653; Plants - 688; Viruses - 0; Other Eukaryotes - 240 (source: NCBI BLink). & (gnl|cdd|30625 : 117.0) no description available & (reliability: 1356.0) & (original description: Putative THBO, Description = Tetrahydroberberine oxidase, PFAM = PF01565;PF08031)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf06483_145593-149179' '(at4g20820 : 453.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44440.1); Has 4739 Blast hits to 4596 proteins in 725 species: Archae - 60; Bacteria - 2023; Metazoa - 34; Fungi - 1711; Plants - 692; Viruses - 0; Other Eukaryotes - 219 (source: NCBI BLink). & (gnl|cdd|85533 : 110.0) no description available & (reliability: 906.0) & (original description: Putative THBO, Description = Tetrahydroberberine oxidase, PFAM = PF08031;PF01565)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf06596_472422-489725' '(at1g44820 : 601.0) Peptidase M20/M25/M40 family protein; FUNCTIONS IN: hydrolase activity, aminoacylase activity; INVOLVED IN: metabolic process, cellular amino acid metabolic process; LOCATED IN: endomembrane system, cytoplasm; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), N-acyl-L-amino-acid amidohydrolase (InterPro:IPR010159); BEST Arabidopsis thaliana protein match is: Peptidase M20/M25/M40 family protein (TAIR:AT1G44180.1); Has 5585 Blast hits to 5583 proteins in 1537 species: Archae - 130; Bacteria - 3721; Metazoa - 430; Fungi - 258; Plants - 102; Viruses - 2; Other Eukaryotes - 942 (source: NCBI BLink). & (gnl|cdd|37486 : 428.0) no description available & (gnl|cdd|85524 : 143.0) no description available & (reliability: 1202.0) & (original description: Putative ACY1, Description = Aminoacylase-1, PFAM = PF01546)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf06866_8928-15621' '(at1g08980 : 468.0) Encodes an enzyme with similarity to bacterial acylamidohydrolases and exhibits indole-3-acetamide amidohydrolase activity in vitro. This enzyme may be involved in the in vivo biosynthesis of indole-acetic acid from indole-3-acetamide, a native metabolite of A. thaliana. It appears to exist as a monomer.; amidase 1 (AMI1); FUNCTIONS IN: amidase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, indoleacetamide hydrolase activity; INVOLVED IN: indoleacetic acid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: translocon at the outer membrane of chloroplasts 64-V (TAIR:AT5G09420.1); Has 18462 Blast hits to 18443 proteins in 2488 species: Archae - 262; Bacteria - 10888; Metazoa - 543; Fungi - 1390; Plants - 376; Viruses - 0; Other Eukaryotes - 5003 (source: NCBI BLink). & (gnl|cdd|76569 : 368.0) no description available & (gnl|cdd|36425 : 258.0) no description available & (reliability: 936.0) & (original description: Putative gatA, Description = Glutamyl-tRNA(Gln) amidotransferase subunit A, PFAM = PF01425;PF01425)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf07162_482733-501972' '(at5g13690 : 842.0) Encodes an enzyme that is predicted to act as an alpha-N-acetylglucosaminidase (NAGLU). An naglu mutant arrests early in seed development but does not appear to have male or female gametophytic defects. Transcript levels for this gene are increased during reproductive development.; CYCLOPS 1 (CYL1); FUNCTIONS IN: alpha-N-acetylglucosaminidase activity; INVOLVED IN: seed development; LOCATED IN: vacuole; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-N-acetylglucosaminidase (InterPro:IPR007781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68654 : 735.0) no description available & (gnl|cdd|37444 : 684.0) no description available & (reliability: 1684.0) & (original description: Putative NAGLU, Description = Alpha-N-acetylglucosaminidase, PFAM = PF05089;PF12971;PF12972)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf07741_709-4534' '(at1g73050 : 774.0) Glucose-methanol-choline (GMC) oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, acting on CH-OH group of donors, FAD binding; INVOLVED IN: cyanide biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT1G12570.1); Has 10851 Blast hits to 10547 proteins in 1106 species: Archae - 4; Bacteria - 3939; Metazoa - 853; Fungi - 1597; Plants - 293; Viruses - 12; Other Eukaryotes - 4153 (source: NCBI BLink). & (gnl|cdd|36452 : 469.0) no description available & (gnl|cdd|32458 : 177.0) no description available & (reliability: 1548.0) & (original description: Putative MDL2, Description = (R)-mandelonitrile lyase 2, PFAM = PF00732;PF05199)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf07788_536502-540549' '(at1g67880 : 623.0) beta-1,4-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 17 (InterPro:IPR006813); BEST Arabidopsis thaliana protein match is: beta-1,4-N-acetylglucosaminyltransferase family protein (TAIR:AT1G12990.1); Has 985 Blast hits to 984 proteins in 94 species: Archae - 0; Bacteria - 41; Metazoa - 63; Fungi - 34; Plants - 129; Viruses - 4; Other Eukaryotes - 714 (source: NCBI BLink). & (gnl|cdd|68302 : 556.0) no description available & (reliability: 1240.0) & (original description: Putative poGNT3, Description = Beta 1,4 N-acetylglucosaminyltransferase, PFAM = PF04724)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf08030_510191-517623' '(at4g34880 : 470.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: acrylonitrile catabolic process, aldoxime metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT5G07360.2); Has 15395 Blast hits to 15313 proteins in 2409 species: Archae - 237; Bacteria - 9126; Metazoa - 385; Fungi - 509; Plants - 293; Viruses - 0; Other Eukaryotes - 4845 (source: NCBI BLink). & (gnl|cdd|82493 : 398.0) no description available & (gnl|cdd|36425 : 304.0) no description available & (reliability: 940.0) & (original description: Putative amiE, Description = Amidase (AmiE), PFAM = PF01425)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf08208_461416-465092' '(at4g20840 : 604.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: apoplast, plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT4G20830.2); Has 4588 Blast hits to 4445 proteins in 696 species: Archae - 38; Bacteria - 1910; Metazoa - 4; Fungi - 1681; Plants - 781; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (gnl|cdd|85533 : 102.0) no description available & (reliability: 1208.0) & (original description: Putative BBE1, Description = Reticuline oxidase-like protein, PFAM = PF01565;PF08031)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf09087_6239-8638' '(at1g44820 : 158.0) Peptidase M20/M25/M40 family protein; FUNCTIONS IN: hydrolase activity, aminoacylase activity; INVOLVED IN: metabolic process, cellular amino acid metabolic process; LOCATED IN: endomembrane system, cytoplasm; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), N-acyl-L-amino-acid amidohydrolase (InterPro:IPR010159); BEST Arabidopsis thaliana protein match is: Peptidase M20/M25/M40 family protein (TAIR:AT1G44180.1); Has 5585 Blast hits to 5583 proteins in 1537 species: Archae - 130; Bacteria - 3721; Metazoa - 430; Fungi - 258; Plants - 102; Viruses - 2; Other Eukaryotes - 942 (source: NCBI BLink). & (gnl|cdd|37486 : 108.0) no description available & (reliability: 316.0) & (original description: Putative acy1, Description = Aminoacylase-1, PFAM = PF01546)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf09109_303429-307409' '(at5g06060 : 145.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|77008 : 141.0) no description available & (gnl|cdd|35944 : 97.4) no description available & (reliability: 290.0) & (original description: Putative TR, Description = Tropinone reductase, PFAM = PF13561)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf09161_190979-201901' '(q42965|nrl4_tobac : 198.0) Nitrilase 4 (EC 3.5.5.1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36023 : 195.0) no description available & (at5g22300 : 186.0) encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway.; nitrilase 4 (NIT4); CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), Nitrilase/cyanide hydratase, conserved site (InterPro:IPR000132); BEST Arabidopsis thaliana protein match is: nitrilase 3 (TAIR:AT3G44320.1); Has 7653 Blast hits to 7575 proteins in 1747 species: Archae - 162; Bacteria - 5078; Metazoa - 407; Fungi - 539; Plants - 330; Viruses - 11; Other Eukaryotes - 1126 (source: NCBI BLink). & (gnl|cdd|85033 : 103.0) no description available & (reliability: 372.0) & (original description: Putative nIT4, Description = Nitrilase, PFAM = PF00795)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf09595_312099-318645' '(at2g23610 : 228.0) Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on methyl salicylate, MeGA4, or MEGA9 in vitro.; methyl esterase 3 (MES3); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 4 (TAIR:AT2G23580.1); Has 1894 Blast hits to 1892 proteins in 428 species: Archae - 2; Bacteria - 1086; Metazoa - 0; Fungi - 17; Plants - 628; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (q43360|pir7b_orysa : 214.0) Esterase PIR7B (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 456.0) & (original description: Putative MES3, Description = Methylesterase 3, PFAM = PF12697)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf09670_140312-182508' '(at1g07440 : 301.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: response to cadmium ion, response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD-dependent epimerase/dehydratase family protein (TAIR:AT2G29340.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35944 : 243.0) no description available & (gnl|cdd|77008 : 222.0) no description available & (q75kh3|grdh_orysa : 112.0) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 602.0) & (original description: Putative TR1, Description = Tropinone reductase 1, PFAM = PF13561)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf10712_56514-85411' '(at4g08790 : 449.0) Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein; FUNCTIONS IN: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, nitrilase activity; INVOLVED IN: response to cadmium ion, nitrogen compound metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010); BEST Arabidopsis thaliana protein match is: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein (TAIR:AT5G12040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36025 : 390.0) no description available & (gnl|cdd|30737 : 199.0) no description available & (reliability: 898.0) & (original description: Putative NLP2, Description = Nitrilase-like protein 2, PFAM = PF00795)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf10713_2618-15677' '(at4g09900 : 486.0) Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.; methyl esterase 12 (MES12); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 14 (TAIR:AT1G33990.1); Has 2424 Blast hits to 2424 proteins in 522 species: Archae - 7; Bacteria - 1330; Metazoa - 8; Fungi - 32; Plants - 631; Viruses - 0; Other Eukaryotes - 416 (source: NCBI BLink). & (q40708|pir7a_orysa : 144.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 936.0) & (original description: Putative MES12, Description = Putative methylesterase 12, chloroplastic, PFAM = PF12697)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf10974_186471-192164' '(at5g51950 : 652.0) Glucose-methanol-choline (GMC) oxidoreductase family protein; FUNCTIONS IN: aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT3G56060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36452 : 481.0) no description available & (gnl|cdd|32458 : 157.0) no description available & (reliability: 1304.0) & (original description: Putative HTH, Description = Protein HOTHEAD, PFAM = PF00732;PF00732;PF05199)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf11120_30799-34634' '(at1g73050 : 785.0) Glucose-methanol-choline (GMC) oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, acting on CH-OH group of donors, FAD binding; INVOLVED IN: cyanide biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT1G12570.1); Has 10851 Blast hits to 10547 proteins in 1106 species: Archae - 4; Bacteria - 3939; Metazoa - 853; Fungi - 1597; Plants - 293; Viruses - 12; Other Eukaryotes - 4153 (source: NCBI BLink). & (gnl|cdd|36452 : 473.0) no description available & (gnl|cdd|32458 : 168.0) no description available & (reliability: 1570.0) & (original description: Putative hnl, Description = Glucose-methanol-choline (GMC) oxidoreductase family protein, PFAM = PF00732;PF05199)' T '26.8' 'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases' 'niben101scf12293_319025-330638' '(at4g34880 : 521.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: acrylonitrile catabolic process, aldoxime metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT5G07360.2); Has 15395 Blast hits to 15313 proteins in 2409 species: Archae - 237; Bacteria - 9126; Metazoa - 385; Fungi - 509; Plants - 293; Viruses - 0; Other Eukaryotes - 4845 (source: NCBI BLink). & (gnl|cdd|82493 : 383.0) no description available & (gnl|cdd|36425 : 295.0) no description available & (reliability: 1042.0) & (original description: Putative amiE, Description = Amidase (AmiE), PFAM = PF01425)' T '26.9' 'misc.glutathione S transferases' 'nbv0.3scaffold17311_3580-5873' '(gnl|cdd|35627 : 166.0) no description available & (at1g74590 : 165.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 10 (GSTU10); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 9 (TAIR:AT5G62480.1); Has 7913 Blast hits to 7893 proteins in 1194 species: Archae - 0; Bacteria - 4117; Metazoa - 967; Fungi - 129; Plants - 1952; Viruses - 0; Other Eukaryotes - 748 (source: NCBI BLink). & (q03662|gstx1_tobac : 129.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|48607 : 116.0) no description available & (reliability: 330.0) & (original description: Putative GSTU10, Description = Glutathione S-transferase U10, PFAM = PF13417)' T '26.9' 'misc.glutathione S transferases' 'nbv0.3scaffold27514_24292-26937' '(gnl|cdd|29388 : 423.0) no description available & (p22195|per1_arahy : 352.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g58400 : 329.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 620.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T '26.9' 'misc.glutathione S transferases' 'nbv0.3scaffold60493_601-8897' '(gnl|cdd|36086 : 189.0) no description available & (at2g02390 : 178.0) Encodes glutathione transferase belonging to the zeta class of GSTs. Naming convention according to Wagner et al. (2002). The protein undergoes spontaneous thiolation following treatment with the oxidant tert-butylhydroperoxide.; glutathione S-transferase zeta 1 (GSTZ1); FUNCTIONS IN: glutathione transferase activity, catalytic activity; INVOLVED IN: toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Maleylacetoacetate isomerase (InterPro:IPR005955), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase (class zeta) 2 (TAIR:AT2G02380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p28342|gstz1_diaca : 170.0) Glutathione S-transferase 1 (EC 2.5.1.18) (SR8) (GST class-zeta) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|48118 : 146.0) no description available & (reliability: 356.0) & (original description: Putative gst2, Description = Glutathione S-transferase zeta class, PFAM = PF14497;PF13417)' T '26.9' 'misc.glutathione S transferases' 'nbv0.3scaffold69099_1-2963' '(q02200|perx_nicsy : 538.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|29388 : 422.0) no description available & (at1g14550 : 405.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G14540.1); Has 4724 Blast hits to 4696 proteins in 306 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 328; Plants - 4308; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 810.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T '26.9' 'misc.glutathione S transferases' 'nbv0.3scaffold102360_1-1612' '(q02200|perx_nicsy : 213.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) - Nicotiana sylvestris (Wood tobacco) & (at1g14550 : 169.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G14540.1); Has 4724 Blast hits to 4696 proteins in 306 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 328; Plants - 4308; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|29388 : 154.0) no description available & (reliability: 338.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T '26.9' 'misc.glutathione S transferases' 'nbv0.5scaffold532_348572-351703' '(q03662|gstx1_tobac : 306.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (at3g09270 : 210.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|35627 : 195.0) no description available & (gnl|cdd|48112 : 139.0) no description available & (reliability: 420.0) & (original description: Putative gst7, Description = Tau class glutathione S-transferase, PFAM = PF00043;PF02798)' T '26.9' 'misc.glutathione S transferases' 'nbv0.5scaffold545_225857-259368' '(at5g41210 : 335.0) Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase THETA 1 (GSTT1); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: toxin catabolic process; LOCATED IN: peroxisome, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase THETA 3 (TAIR:AT5G41220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36085 : 153.0) no description available & (gnl|cdd|48599 : 124.0) no description available & (reliability: 670.0) & (original description: Putative gst, Description = Theta class glutathione S-transferase, PFAM = PF02798;PF13410)' T '26.9' 'misc.glutathione S transferases' 'nbv0.5scaffold765_131904-139056' '(q03666|gstx4_tobac : 244.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PCNT107) - Nicotiana tabacum (Common tobacco) & (at1g78380 : 230.0) Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; glutathione S-transferase TAU 19 (GSTU19); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone, toxin catabolic process, cellular response to water deprivation; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 6888 Blast hits to 6873 proteins in 1203 species: Archae - 0; Bacteria - 3293; Metazoa - 563; Fungi - 167; Plants - 2052; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (gnl|cdd|35627 : 180.0) no description available & (gnl|cdd|48607 : 126.0) no description available & (reliability: 460.0) & (original description: Putative gst6, Description = Tau class glutathione S-transferase, PFAM = PF13410;PF02798;PF02798)' T '26.9' 'misc.glutathione S transferases' 'nbv0.5scaffold1516_180007-205031' '(gnl|cdd|35627 : 166.0) no description available & (at1g74590 : 160.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 10 (GSTU10); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 9 (TAIR:AT5G62480.1); Has 7913 Blast hits to 7893 proteins in 1194 species: Archae - 0; Bacteria - 4117; Metazoa - 967; Fungi - 129; Plants - 1952; Viruses - 0; Other Eukaryotes - 748 (source: NCBI BLink). & (q03662|gstx1_tobac : 132.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|48607 : 114.0) no description available & (reliability: 320.0) & (original description: Putative GSTU21, Description = Glutathione S-transferase GST 12, PFAM = PF02798)' T '26.9' 'misc.glutathione S transferases' 'nbv0.5scaffold3281_135575-140616' '(gnl|cdd|29388 : 421.0) no description available & (p22195|per1_arahy : 359.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g58400 : 331.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 624.0) & (original description: Putative prx1, Description = Peroxidase, PFAM = PF00141)' T '26.9' 'misc.glutathione S transferases' 'niben044ctg26110023_534-4601' '(p49332|gstxc_tobac : 290.0) Probable glutathione S-transferase parC (EC 2.5.1.18) (Auxin-regulated protein parC) - Nicotiana tabacum (Common tobacco) & (at1g78360 : 265.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 21 (GSTU21); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 19 (TAIR:AT1G78380.1); Has 4807 Blast hits to 4792 proteins in 997 species: Archae - 0; Bacteria - 1971; Metazoa - 328; Fungi - 164; Plants - 1959; Viruses - 0; Other Eukaryotes - 385 (source: NCBI BLink). & (gnl|cdd|35627 : 239.0) no description available & (gnl|cdd|48112 : 147.0) no description available & (reliability: 530.0) & (original description: Putative PARC, Description = Probable glutathione S-transferase parC, PFAM = PF13410;PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben044scf00008099ctg023_6681-8244' '(q03663|gstx2_tobac : 167.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT35/PCNT111) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35627 : 146.0) no description available & (at2g29420 : 141.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Induced by Salicylic acid. Independent of NPR1 for their induction by salicylic acid.; glutathione S-transferase tau 7 (GSTU7); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 4 (TAIR:AT2G29460.1); Has 8702 Blast hits to 8684 proteins in 1229 species: Archae - 0; Bacteria - 4688; Metazoa - 929; Fungi - 158; Plants - 2134; Viruses - 0; Other Eukaryotes - 793 (source: NCBI BLink). & (gnl|cdd|48607 : 115.0) no description available & (reliability: 282.0) & (original description: Putative gst7, Description = Tau class glutathione S-transferase, PFAM = PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben044scf00011992ctg000_2882-6262' '(gnl|cdd|29388 : 414.0) no description available & (at3g03670 : 248.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G17820.1); Has 4234 Blast hits to 4201 proteins in 214 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 58; Plants - 4144; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (p22196|per2_arahy : 245.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 474.0) & (original description: Putative prx6, Description = Peroxidase, PFAM = PF00141)' T '26.9' 'misc.glutathione S transferases' 'niben044scf00037955ctg002_6653-9852' '(at1g74590 : 196.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 10 (GSTU10); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 9 (TAIR:AT5G62480.1); Has 7913 Blast hits to 7893 proteins in 1194 species: Archae - 0; Bacteria - 4117; Metazoa - 967; Fungi - 129; Plants - 1952; Viruses - 0; Other Eukaryotes - 748 (source: NCBI BLink). & (gnl|cdd|35627 : 189.0) no description available & (p32110|gstx6_soybn : 135.0) Probable glutathione S-transferase (EC 2.5.1.18) (Heat shock protein 26A) (G2-4) - Glycine max (Soybean) & (gnl|cdd|48607 : 111.0) no description available & (reliability: 392.0) & (original description: Putative GSTU10, Description = Glutathione S-transferase U10, PFAM = PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben044scf00049661ctg000_1-3375' '(q03666|gstx4_tobac : 326.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PCNT107) - Nicotiana tabacum (Common tobacco) & (at1g78380 : 308.0) Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; glutathione S-transferase TAU 19 (GSTU19); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone, toxin catabolic process, cellular response to water deprivation; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 6888 Blast hits to 6873 proteins in 1203 species: Archae - 0; Bacteria - 3293; Metazoa - 563; Fungi - 167; Plants - 2052; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (gnl|cdd|35627 : 247.0) no description available & (gnl|cdd|48112 : 159.0) no description available & (reliability: 616.0) & (original description: Putative PARC, Description = Probable glutathione S-transferase parC, PFAM = PF13410;PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben044scf00050910ctg001_10786-15452' '(at1g10370 : 228.0) EARLY-RESPONSIVE TO DEHYDRATION 9 (ERD9); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to water deprivation, response to karrikin, toxin catabolic process; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 18 (TAIR:AT1G10360.1); Has 6064 Blast hits to 6029 proteins in 1096 species: Archae - 0; Bacteria - 2896; Metazoa - 397; Fungi - 130; Plants - 2065; Viruses - 0; Other Eukaryotes - 576 (source: NCBI BLink). & (gnl|cdd|35627 : 207.0) no description available & (gnl|cdd|48112 : 169.0) no description available & (q06398|gstu6_orysa : 154.0) Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28 kDa cold-induced protein) - Oryza sativa (Rice) & (reliability: 456.0) & (original description: Putative GSTU17, Description = Glutathione S-transferase U17, PFAM = PF00043)' T '26.9' 'misc.glutathione S transferases' 'niben044scf00052917ctg002_2918-5863' '(q03662|gstx1_tobac : 281.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (at3g09270 : 222.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|35627 : 217.0) no description available & (gnl|cdd|48112 : 157.0) no description available & (reliability: 444.0) & (original description: Putative gst7, Description = Tau class glutathione S-transferase, PFAM = PF02798;PF00043)' T '26.9' 'misc.glutathione S transferases' 'niben044scf00055160ctg001_2302-5803' '(q03666|gstx4_tobac : 330.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PCNT107) - Nicotiana tabacum (Common tobacco) & (at1g78380 : 307.0) Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; glutathione S-transferase TAU 19 (GSTU19); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone, toxin catabolic process, cellular response to water deprivation; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 6888 Blast hits to 6873 proteins in 1203 species: Archae - 0; Bacteria - 3293; Metazoa - 563; Fungi - 167; Plants - 2052; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (gnl|cdd|35627 : 250.0) no description available & (gnl|cdd|48112 : 156.0) no description available & (reliability: 614.0) & (original description: Putative PARC, Description = Probable glutathione S-transferase parC, PFAM = PF02798;PF13410)' T '26.9' 'misc.glutathione S transferases' 'niben101ctg12711_1-1633' '(gnl|cdd|29388 : 391.0) no description available & (p22195|per1_arahy : 258.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at1g44970 : 253.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4592 Blast hits to 4563 proteins in 305 species: Archae - 0; Bacteria - 10; Metazoa - 5; Fungi - 193; Plants - 4307; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative PER1, Description = Peroxidase 1, PFAM = PF00141)' T '26.9' 'misc.glutathione S transferases' 'niben101scf00069_270067-273982' '(p46440|gstf2_tobac : 306.0) Glutathione S-transferase APIC (EC 2.5.1.18) (GST class-phi) - Nicotiana tabacum (Common tobacco) & (at2g47730 : 251.0) Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase phi 8 (GSTF8); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: in 8 processes; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase PHI 2 (TAIR:AT4G02520.1); Has 15602 Blast hits to 15586 proteins in 1475 species: Archae - 0; Bacteria - 9018; Metazoa - 1960; Fungi - 883; Plants - 1109; Viruses - 0; Other Eukaryotes - 2632 (source: NCBI BLink). & (gnl|cdd|36085 : 182.0) no description available & (gnl|cdd|48114 : 178.0) no description available & (reliability: 502.0) & (original description: Putative gst1, Description = Phi class glutathione S-transferase, PFAM = PF00043;PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf00369_468698-472574' '(gnl|cdd|35627 : 188.0) no description available & (at2g29420 : 174.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Induced by Salicylic acid. Independent of NPR1 for their induction by salicylic acid.; glutathione S-transferase tau 7 (GSTU7); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 4 (TAIR:AT2G29460.1); Has 8702 Blast hits to 8684 proteins in 1229 species: Archae - 0; Bacteria - 4688; Metazoa - 929; Fungi - 158; Plants - 2134; Viruses - 0; Other Eukaryotes - 793 (source: NCBI BLink). & (p32110|gstx6_soybn : 166.0) Probable glutathione S-transferase (EC 2.5.1.18) (Heat shock protein 26A) (G2-4) - Glycine max (Soybean) & (gnl|cdd|48112 : 138.0) no description available & (reliability: 348.0) & (original description: Putative gst, Description = Glutathione-S-transferase, PFAM = PF00043;PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf00402_558590-561894' '(gnl|cdd|29388 : 414.0) no description available & (at3g03670 : 254.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G17820.1); Has 4234 Blast hits to 4201 proteins in 214 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 58; Plants - 4144; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (p22195|per1_arahy : 251.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 476.0) & (original description: Putative PER2, Description = Peroxidase 2, PFAM = PF00141)' T '26.9' 'misc.glutathione S transferases' 'niben101scf00416_123850-127394' '(gnl|cdd|29388 : 405.0) no description available & (p22196|per2_arahy : 261.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (at5g51890 : 259.0) encodes peroxidase involved in the lignification of tracheary elements (TE) in roots; Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G42180.1); Has 4522 Blast hits to 4498 proteins in 281 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 153; Plants - 4313; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative POD, Description = Peroxidase, PFAM = PF00141)' T '26.9' 'misc.glutathione S transferases' 'niben101scf00612_185251-188482' '(gnl|cdd|35627 : 210.0) no description available & (p32110|gstx6_soybn : 195.0) Probable glutathione S-transferase (EC 2.5.1.18) (Heat shock protein 26A) (G2-4) - Glycine max (Soybean) & (at3g09270 : 182.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|48112 : 148.0) no description available & (reliability: 364.0) & (original description: Putative gst, Description = Tau class glutathione S-transferase, PFAM = PF00043;PF13417)' T '26.9' 'misc.glutathione S transferases' 'niben101scf00897_329016-332835' '(q03666|gstx4_tobac : 337.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PCNT107) - Nicotiana tabacum (Common tobacco) & (at1g78380 : 311.0) Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; glutathione S-transferase TAU 19 (GSTU19); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone, toxin catabolic process, cellular response to water deprivation; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 6888 Blast hits to 6873 proteins in 1203 species: Archae - 0; Bacteria - 3293; Metazoa - 563; Fungi - 167; Plants - 2052; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (gnl|cdd|35627 : 251.0) no description available & (gnl|cdd|48112 : 163.0) no description available & (reliability: 622.0) & (original description: Putative PARC, Description = Probable glutathione S-transferase parC, PFAM = PF13410;PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf00897_338585-350294' '(q03666|gstx4_tobac : 341.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PCNT107) - Nicotiana tabacum (Common tobacco) & (at1g78380 : 318.0) Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; glutathione S-transferase TAU 19 (GSTU19); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone, toxin catabolic process, cellular response to water deprivation; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 6888 Blast hits to 6873 proteins in 1203 species: Archae - 0; Bacteria - 3293; Metazoa - 563; Fungi - 167; Plants - 2052; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (gnl|cdd|35627 : 265.0) no description available & (gnl|cdd|48112 : 166.0) no description available & (reliability: 636.0) & (original description: Putative GSTU21, Description = Glutathione S-transferase U21, PFAM = PF02798;PF13410)' T '26.9' 'misc.glutathione S transferases' 'niben101scf00898_23759-26144' '(at1g10370 : 258.0) EARLY-RESPONSIVE TO DEHYDRATION 9 (ERD9); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to water deprivation, response to karrikin, toxin catabolic process; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 18 (TAIR:AT1G10360.1); Has 6064 Blast hits to 6029 proteins in 1096 species: Archae - 0; Bacteria - 2896; Metazoa - 397; Fungi - 130; Plants - 2065; Viruses - 0; Other Eukaryotes - 576 (source: NCBI BLink). & (gnl|cdd|35627 : 225.0) no description available & (q06398|gstu6_orysa : 195.0) Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28 kDa cold-induced protein) - Oryza sativa (Rice) & (gnl|cdd|48112 : 145.0) no description available & (reliability: 516.0) & (original description: Putative GSTU17, Description = Glutathione S-transferase U17, PFAM = PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf00898_75861-78865' '(at1g10370 : 250.0) EARLY-RESPONSIVE TO DEHYDRATION 9 (ERD9); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to water deprivation, response to karrikin, toxin catabolic process; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 18 (TAIR:AT1G10360.1); Has 6064 Blast hits to 6029 proteins in 1096 species: Archae - 0; Bacteria - 2896; Metazoa - 397; Fungi - 130; Plants - 2065; Viruses - 0; Other Eukaryotes - 576 (source: NCBI BLink). & (gnl|cdd|35627 : 236.0) no description available & (q06398|gstu6_orysa : 206.0) Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28 kDa cold-induced protein) - Oryza sativa (Rice) & (gnl|cdd|48112 : 140.0) no description available & (reliability: 500.0) & (original description: Putative gst1, Description = Glutathione S-transferase 1, PFAM = PF00043;PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf01290_100093-105952' '(gnl|cdd|29388 : 428.0) no description available & (p22195|per1_arahy : 409.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g05340 : 346.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 632.0) & (original description: Putative PNC1, Description = Cationic peroxidase 1, PFAM = PF00141)' T '26.9' 'misc.glutathione S transferases' 'niben101scf01517_589464-592934' '(p49332|gstxc_tobac : 292.0) Probable glutathione S-transferase parC (EC 2.5.1.18) (Auxin-regulated protein parC) - Nicotiana tabacum (Common tobacco) & (at1g78380 : 270.0) Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; glutathione S-transferase TAU 19 (GSTU19); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone, toxin catabolic process, cellular response to water deprivation; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 6888 Blast hits to 6873 proteins in 1203 species: Archae - 0; Bacteria - 3293; Metazoa - 563; Fungi - 167; Plants - 2052; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (gnl|cdd|35627 : 226.0) no description available & (gnl|cdd|48112 : 133.0) no description available & (reliability: 540.0) & (original description: Putative gst1, Description = Tau class glutathione S-transferase, PFAM = PF13410;PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf01587_21124-25173' '(q02200|perx_nicsy : 520.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|29388 : 411.0) no description available & (at1g14550 : 394.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G14540.1); Has 4724 Blast hits to 4696 proteins in 306 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 328; Plants - 4308; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 788.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T '26.9' 'misc.glutathione S transferases' 'niben101scf01587_21912-63256' '(q02200|perx_nicsy : 221.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) - Nicotiana sylvestris (Wood tobacco) & (at1g14550 : 182.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G14540.1); Has 4724 Blast hits to 4696 proteins in 306 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 328; Plants - 4308; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|29388 : 160.0) no description available & (reliability: 364.0) & (original description: Putative px12, Description = Peroxidase, PFAM = PF00141)' T '26.9' 'misc.glutathione S transferases' 'niben101scf01920_1-4291' '(gnl|cdd|29388 : 376.0) no description available & (at1g44970 : 260.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4592 Blast hits to 4563 proteins in 305 species: Archae - 0; Bacteria - 10; Metazoa - 5; Fungi - 193; Plants - 4307; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (p22196|per2_arahy : 255.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 472.0) & (original description: Putative prx6, Description = Peroxidase, PFAM = PF00141)' T '26.9' 'misc.glutathione S transferases' 'niben101scf01922_723718-727076' '(q03662|gstx1_tobac : 176.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35627 : 170.0) no description available & (at2g29470 : 159.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase tau 3 (GSTU3); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 4 (TAIR:AT2G29460.1); Has 6980 Blast hits to 6962 proteins in 1149 species: Archae - 0; Bacteria - 3652; Metazoa - 620; Fungi - 163; Plants - 1988; Viruses - 0; Other Eukaryotes - 557 (source: NCBI BLink). & (gnl|cdd|48112 : 125.0) no description available & (reliability: 318.0) & (original description: Putative gst, Description = Glutathione-S-transferase, PFAM = PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf02086_222514-228919' '(at5g02790 : 293.0) Glutathione transferase L3 (GSTL3); INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione transferase lambda 1 (TAIR:AT5G02780.1); Has 4064 Blast hits to 3976 proteins in 669 species: Archae - 10; Bacteria - 1017; Metazoa - 669; Fungi - 181; Plants - 1645; Viruses - 0; Other Eukaryotes - 542 (source: NCBI BLink). & (p49248|in21_maize : 251.0) IN2-1 protein - Zea mays (Maize) & (gnl|cdd|35627 : 160.0) no description available & (gnl|cdd|48130 : 152.0) no description available & (reliability: 586.0) & (original description: Putative GSTL3, Description = Glutathione S-transferase L3, PFAM = PF13417;PF13410)' T '26.9' 'misc.glutathione S transferases' 'niben101scf02105_371684-377120' '(at5g41210 : 328.0) Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase THETA 1 (GSTT1); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: toxin catabolic process; LOCATED IN: peroxisome, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase THETA 3 (TAIR:AT5G41220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36085 : 155.0) no description available & (gnl|cdd|48110 : 123.0) no description available & (reliability: 656.0) & (original description: Putative GSTT1, Description = Glutathione S-transferase T1, PFAM = PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf02227_518465-525968' '(at5g02790 : 303.0) Glutathione transferase L3 (GSTL3); INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione transferase lambda 1 (TAIR:AT5G02780.1); Has 4064 Blast hits to 3976 proteins in 669 species: Archae - 10; Bacteria - 1017; Metazoa - 669; Fungi - 181; Plants - 1645; Viruses - 0; Other Eukaryotes - 542 (source: NCBI BLink). & (p49248|in21_maize : 261.0) IN2-1 protein - Zea mays (Maize) & (gnl|cdd|48130 : 169.0) no description available & (gnl|cdd|35627 : 165.0) no description available & (reliability: 606.0) & (original description: Putative GSTL3, Description = Glutathione S-transferase L3, PFAM = PF13410;PF13417)' T '26.9' 'misc.glutathione S transferases' 'niben101scf02325_162475-165235' '(gnl|cdd|35627 : 216.0) no description available & (at2g29420 : 211.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Induced by Salicylic acid. Independent of NPR1 for their induction by salicylic acid.; glutathione S-transferase tau 7 (GSTU7); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 4 (TAIR:AT2G29460.1); Has 8702 Blast hits to 8684 proteins in 1229 species: Archae - 0; Bacteria - 4688; Metazoa - 929; Fungi - 158; Plants - 2134; Viruses - 0; Other Eukaryotes - 793 (source: NCBI BLink). & (p32110|gstx6_soybn : 208.0) Probable glutathione S-transferase (EC 2.5.1.18) (Heat shock protein 26A) (G2-4) - Glycine max (Soybean) & (gnl|cdd|48112 : 149.0) no description available & (reliability: 422.0) & (original description: Putative gst, Description = Tau class glutathione S-transferase, PFAM = PF02798;PF00043)' T '26.9' 'misc.glutathione S transferases' 'niben101scf02325_340887-344065' '(gnl|cdd|35627 : 192.0) no description available & (p32110|gstx6_soybn : 157.0) Probable glutathione S-transferase (EC 2.5.1.18) (Heat shock protein 26A) (G2-4) - Glycine max (Soybean) & (at2g29420 : 156.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Induced by Salicylic acid. Independent of NPR1 for their induction by salicylic acid.; glutathione S-transferase tau 7 (GSTU7); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 4 (TAIR:AT2G29460.1); Has 8702 Blast hits to 8684 proteins in 1229 species: Archae - 0; Bacteria - 4688; Metazoa - 929; Fungi - 158; Plants - 2134; Viruses - 0; Other Eukaryotes - 793 (source: NCBI BLink). & (gnl|cdd|48112 : 149.0) no description available & (reliability: 312.0) & (original description: Putative gstu4, Description = Glutathione S-transferase, PFAM = PF00043;PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf02349_186131-191150' '(p12437|perx_soltu : 435.0) Suberization-associated anionic peroxidase precursor (EC 1.11.1.7) (POPA) - Solanum tuberosum (Potato) & (gnl|cdd|29388 : 351.0) no description available & (at5g05340 : 201.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T '26.9' 'misc.glutathione S transferases' 'niben101scf02452_431790-434775' '(at1g77290 : 374.0) Glutathione S-transferase family protein; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase (class phi) 5 (TAIR:AT1G02940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39621 : 265.0) no description available & (gnl|cdd|30970 : 88.3) no description available & (reliability: 748.0) & (original description: Putative TCHQD, Description = Glutathione S-transferase TCHQD, PFAM = PF13417;PF13410)' T '26.9' 'misc.glutathione S transferases' 'niben101scf02597_366622-369651' '(at1g77290 : 377.0) Glutathione S-transferase family protein; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase (class phi) 5 (TAIR:AT1G02940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39621 : 271.0) no description available & (gnl|cdd|30970 : 89.9) no description available & (reliability: 754.0) & (original description: Putative TCHQD, Description = Glutathione S-transferase TCHQD, PFAM = PF13417;PF13410)' T '26.9' 'misc.glutathione S transferases' 'niben101scf02971_87867-94183' '(q03666|gstx4_tobac : 306.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PCNT107) - Nicotiana tabacum (Common tobacco) & (at1g17180 : 291.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 25 (GSTU25); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 24 (TAIR:AT1G17170.1); Has 6324 Blast hits to 6297 proteins in 1135 species: Archae - 0; Bacteria - 2853; Metazoa - 581; Fungi - 157; Plants - 1982; Viruses - 0; Other Eukaryotes - 751 (source: NCBI BLink). & (gnl|cdd|35627 : 267.0) no description available & (gnl|cdd|48112 : 175.0) no description available & (reliability: 582.0) & (original description: Putative GSTU28, Description = Glutathione S-transferase U28, PFAM = PF02798;PF13410)' T '26.9' 'misc.glutathione S transferases' 'niben101scf03147_949782-952882' '(q03662|gstx1_tobac : 353.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35627 : 232.0) no description available & (at3g09270 : 222.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|48112 : 146.0) no description available & (reliability: 444.0) & (original description: Putative PRP1, Description = Probable glutathione S-transferase, PFAM = PF00043;PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf03147_1044590-1047725' '(q03664|gstx3_tobac : 325.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PCNT103) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35627 : 219.0) no description available & (at3g09270 : 182.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|48112 : 138.0) no description available & (reliability: 364.0) & (original description: Putative gst7, Description = Tau class glutathione S-transferase, PFAM = PF00043;PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf03147_1101932-1104931' '(q03662|gstx1_tobac : 350.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35627 : 222.0) no description available & (at3g09270 : 201.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|48112 : 146.0) no description available & (reliability: 402.0) & (original description: Putative gst7, Description = Tau class glutathione S-transferase, PFAM = PF00043;PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf03147_1150225-1152958' '(q03662|gstx1_tobac : 284.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35627 : 219.0) no description available & (at2g29420 : 167.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Induced by Salicylic acid. Independent of NPR1 for their induction by salicylic acid.; glutathione S-transferase tau 7 (GSTU7); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 4 (TAIR:AT2G29460.1); Has 8702 Blast hits to 8684 proteins in 1229 species: Archae - 0; Bacteria - 4688; Metazoa - 929; Fungi - 158; Plants - 2134; Viruses - 0; Other Eukaryotes - 793 (source: NCBI BLink). & (gnl|cdd|48112 : 134.0) no description available & (reliability: 334.0) & (original description: Putative gst7, Description = Tau class glutathione S-transferase, PFAM = PF02798;PF00043)' T '26.9' 'misc.glutathione S transferases' 'niben101scf03197_198939-202200' '(gnl|cdd|35627 : 203.0) no description available & (q03662|gstx1_tobac : 160.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (at3g09270 : 156.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|48112 : 131.0) no description available & (reliability: 312.0) & (original description: Putative gst, Description = Putative glutathione S-transferase, PFAM = PF02798;PF00043)' T '26.9' 'misc.glutathione S transferases' 'niben101scf03263_353341-371228' '(gnl|cdd|35627 : 201.0) no description available & (q03663|gstx2_tobac : 175.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT35/PCNT111) - Nicotiana tabacum (Common tobacco) & (at2g29420 : 169.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Induced by Salicylic acid. Independent of NPR1 for their induction by salicylic acid.; glutathione S-transferase tau 7 (GSTU7); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 4 (TAIR:AT2G29460.1); Has 8702 Blast hits to 8684 proteins in 1229 species: Archae - 0; Bacteria - 4688; Metazoa - 929; Fungi - 158; Plants - 2134; Viruses - 0; Other Eukaryotes - 793 (source: NCBI BLink). & (gnl|cdd|48112 : 138.0) no description available & (reliability: 338.0) & (original description: Putative gst, Description = Glutathione s-transferase, putative, PFAM = PF00043;PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf03482_132929-136043' '(at1g74590 : 203.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 10 (GSTU10); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 9 (TAIR:AT5G62480.1); Has 7913 Blast hits to 7893 proteins in 1194 species: Archae - 0; Bacteria - 4117; Metazoa - 967; Fungi - 129; Plants - 1952; Viruses - 0; Other Eukaryotes - 748 (source: NCBI BLink). & (gnl|cdd|35627 : 193.0) no description available & (p32110|gstx6_soybn : 139.0) Probable glutathione S-transferase (EC 2.5.1.18) (Heat shock protein 26A) (G2-4) - Glycine max (Soybean) & (gnl|cdd|48607 : 116.0) no description available & (reliability: 406.0) & (original description: Putative gst12, Description = Tau class glutathione S-transferase, PFAM = PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf03482_143307-145589' '(at1g74590 : 225.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 10 (GSTU10); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 9 (TAIR:AT5G62480.1); Has 7913 Blast hits to 7893 proteins in 1194 species: Archae - 0; Bacteria - 4117; Metazoa - 967; Fungi - 129; Plants - 1952; Viruses - 0; Other Eukaryotes - 748 (source: NCBI BLink). & (gnl|cdd|35627 : 221.0) no description available & (p32110|gstx6_soybn : 160.0) Probable glutathione S-transferase (EC 2.5.1.18) (Heat shock protein 26A) (G2-4) - Glycine max (Soybean) & (gnl|cdd|48607 : 120.0) no description available & (reliability: 450.0) & (original description: Putative GSTU10, Description = Glutathione S-transferase U10, PFAM = PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf03861_5373-53350' '(q02200|perx_nicsy : 219.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|29388 : 187.0) no description available & (at1g14550 : 171.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G14540.1); Has 4724 Blast hits to 4696 proteins in 306 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 328; Plants - 4308; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative PMPOX, Description = Peroxidase, PFAM = PF00141)' T '26.9' 'misc.glutathione S transferases' 'niben101scf03861_71341-74636' '(q02200|perx_nicsy : 542.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|29388 : 425.0) no description available & (at1g14550 : 407.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G14540.1); Has 4724 Blast hits to 4696 proteins in 306 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 328; Plants - 4308; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 814.0) & (original description: Putative PO2, Description = Peroxidase, PFAM = PF00141)' T '26.9' 'misc.glutathione S transferases' 'niben101scf03861_72298-96245' '(q02200|perx_nicsy : 226.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) - Nicotiana sylvestris (Wood tobacco) & (at1g14550 : 177.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G14540.1); Has 4724 Blast hits to 4696 proteins in 306 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 328; Plants - 4308; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|29388 : 174.0) no description available & (reliability: 354.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141;PF00141)' T '26.9' 'misc.glutathione S transferases' 'niben101scf03861_92322-96266' '(q02200|perx_nicsy : 585.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|29388 : 440.0) no description available & (at1g14550 : 405.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G14540.1); Has 4724 Blast hits to 4696 proteins in 306 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 328; Plants - 4308; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 810.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T '26.9' 'misc.glutathione S transferases' 'niben101scf03867_87502-93693' '(at4g19880 : 561.0) Glutathione S-transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutathione S-transferase, predicted (InterPro:IPR016639), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT5G45020.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38114 : 447.0) no description available & (gnl|cdd|30784 : 418.0) no description available & (reliability: 1122.0) & (original description: Putative gst, Description = Glutathione transferase, PFAM = PF13409;PF13410)' T '26.9' 'misc.glutathione S transferases' 'niben101scf03927_289457-292693' '(gnl|cdd|29388 : 422.0) no description available & (p22195|per1_arahy : 335.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g05340 : 311.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 590.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T '26.9' 'misc.glutathione S transferases' 'niben101scf04174_168197-171856' '(q03666|gstx4_tobac : 418.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PCNT107) - Nicotiana tabacum (Common tobacco) & (at1g78380 : 317.0) Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; glutathione S-transferase TAU 19 (GSTU19); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone, toxin catabolic process, cellular response to water deprivation; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 6888 Blast hits to 6873 proteins in 1203 species: Archae - 0; Bacteria - 3293; Metazoa - 563; Fungi - 167; Plants - 2052; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (gnl|cdd|35627 : 264.0) no description available & (gnl|cdd|48112 : 172.0) no description available & (reliability: 634.0) & (original description: Putative PARC, Description = Probable glutathione S-transferase parC, PFAM = PF02798;PF13410)' T '26.9' 'misc.glutathione S transferases' 'niben101scf04174_178921-186313' '(q03666|gstx4_tobac : 308.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PCNT107) - Nicotiana tabacum (Common tobacco) & (at1g78380 : 291.0) Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; glutathione S-transferase TAU 19 (GSTU19); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone, toxin catabolic process, cellular response to water deprivation; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 6888 Blast hits to 6873 proteins in 1203 species: Archae - 0; Bacteria - 3293; Metazoa - 563; Fungi - 167; Plants - 2052; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (gnl|cdd|35627 : 240.0) no description available & (gnl|cdd|48112 : 162.0) no description available & (reliability: 582.0) & (original description: Putative gst6, Description = Tau class glutathione S-transferase, PFAM = PF02798;PF02798;PF02798;PF13410)' T '26.9' 'misc.glutathione S transferases' 'niben101scf04174_179310-182244' '(p46417|lgul_soybn : 179.0) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) - Glycine max (Soybean) & (at1g17180 : 173.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 25 (GSTU25); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 24 (TAIR:AT1G17170.1); Has 6324 Blast hits to 6297 proteins in 1135 species: Archae - 0; Bacteria - 2853; Metazoa - 581; Fungi - 157; Plants - 1982; Viruses - 0; Other Eukaryotes - 751 (source: NCBI BLink). & (gnl|cdd|35627 : 163.0) no description available & (gnl|cdd|48607 : 123.0) no description available & (reliability: 346.0) & (original description: Putative gst6, Description = Tau class glutathione S-transferase, PFAM = PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf05036_8849-13153' '(q03666|gstx4_tobac : 235.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PCNT107) - Nicotiana tabacum (Common tobacco) & (at1g78380 : 219.0) Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; glutathione S-transferase TAU 19 (GSTU19); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone, toxin catabolic process, cellular response to water deprivation; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 6888 Blast hits to 6873 proteins in 1203 species: Archae - 0; Bacteria - 3293; Metazoa - 563; Fungi - 167; Plants - 2052; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (gnl|cdd|35627 : 208.0) no description available & (gnl|cdd|48112 : 149.0) no description available & (reliability: 438.0) & (original description: Putative PARC, Description = Probable glutathione S-transferase parC, PFAM = PF13410;PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf05404_940736-950190' '(q03662|gstx1_tobac : 305.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (at3g09270 : 234.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|35627 : 220.0) no description available & (gnl|cdd|48112 : 156.0) no description available & (reliability: 468.0) & (original description: Putative gst7, Description = Tau class glutathione S-transferase, PFAM = PF00043;PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf05680_99473-102344' '(gnl|cdd|35627 : 198.0) no description available & (p32110|gstx6_soybn : 174.0) Probable glutathione S-transferase (EC 2.5.1.18) (Heat shock protein 26A) (G2-4) - Glycine max (Soybean) & (at2g29420 : 164.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Induced by Salicylic acid. Independent of NPR1 for their induction by salicylic acid.; glutathione S-transferase tau 7 (GSTU7); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 4 (TAIR:AT2G29460.1); Has 8702 Blast hits to 8684 proteins in 1229 species: Archae - 0; Bacteria - 4688; Metazoa - 929; Fungi - 158; Plants - 2134; Viruses - 0; Other Eukaryotes - 793 (source: NCBI BLink). & (gnl|cdd|48112 : 145.0) no description available & (reliability: 328.0) & (original description: Putative GSTU5, Description = Tau class glutathione S-transferase, PFAM = PF13410;PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf05952_3553-7798' '(at2g30860 : 198.0) Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase PHI 9 (GSTF9); FUNCTIONS IN: glutathione transferase activity, glutathione peroxidase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to zinc ion, defense response to bacterium, toxin catabolic process, defense response; LOCATED IN: thylakoid, apoplast, chloroplast, plasma membrane, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase PHI 10 (TAIR:AT2G30870.1); Has 9998 Blast hits to 9981 proteins in 1215 species: Archae - 0; Bacteria - 5032; Metazoa - 1549; Fungi - 611; Plants - 924; Viruses - 0; Other Eukaryotes - 1882 (source: NCBI BLink). & (p46440|gstf2_tobac : 196.0) Glutathione S-transferase APIC (EC 2.5.1.18) (GST class-phi) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|48114 : 174.0) no description available & (gnl|cdd|36085 : 170.0) no description available & (reliability: 396.0) & (original description: Putative GSTF9, Description = Glutathione S-transferase F9, PFAM = PF00043;PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf06080_31082-34100' '(p32110|gstx6_soybn : 220.0) Probable glutathione S-transferase (EC 2.5.1.18) (Heat shock protein 26A) (G2-4) - Glycine max (Soybean) & (at3g09270 : 215.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|35627 : 214.0) no description available & (gnl|cdd|48112 : 147.0) no description available & (reliability: 430.0) & (original description: Putative GSTU1, Description = Glutathione S-transferase U1, PFAM = PF00043;PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf06291_356518-364020' '(at3g55040 : 315.0) Encodes a member of the lambda family of glutathione transferases. It has thiol transferase activity and self S-glutathionylation activity in vitro.; glutathione transferase lambda 2 (GSTL2); INVOLVED IN: protein amino acid glutathionylation; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT5G02790.1); Has 2794 Blast hits to 2712 proteins in 545 species: Archae - 4; Bacteria - 768; Metazoa - 398; Fungi - 95; Plants - 1147; Viruses - 0; Other Eukaryotes - 382 (source: NCBI BLink). & (p49248|in21_maize : 257.0) IN2-1 protein - Zea mays (Maize) & (gnl|cdd|35627 : 169.0) no description available & (gnl|cdd|48130 : 168.0) no description available & (reliability: 630.0) & (original description: Putative GSTl1, Description = Glutathione S-transferase, PFAM = PF13410;PF13417)' T '26.9' 'misc.glutathione S transferases' 'niben101scf06883_6517-9794' '(gnl|cdd|35627 : 222.0) no description available & (at3g09270 : 214.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (q03662|gstx1_tobac : 197.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|48112 : 128.0) no description available & (reliability: 428.0) & (original description: Putative gst, Description = Tau class glutathione S-transferase, PFAM = PF00043;PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf06958_249163-253926' '(at1g10370 : 292.0) EARLY-RESPONSIVE TO DEHYDRATION 9 (ERD9); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to water deprivation, response to karrikin, toxin catabolic process; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 18 (TAIR:AT1G10360.1); Has 6064 Blast hits to 6029 proteins in 1096 species: Archae - 0; Bacteria - 2896; Metazoa - 397; Fungi - 130; Plants - 2065; Viruses - 0; Other Eukaryotes - 576 (source: NCBI BLink). & (gnl|cdd|35627 : 254.0) no description available & (q06398|gstu6_orysa : 207.0) Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28 kDa cold-induced protein) - Oryza sativa (Rice) & (gnl|cdd|48112 : 168.0) no description available & (reliability: 584.0) & (original description: Putative gst1, Description = Glutathione S-transferase 1, PFAM = PF00043;PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf07253_140858-144390' '(at3g03190 : 250.0) Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase F11 (GSTF11); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase phi 12 (TAIR:AT5G17220.1); Has 10837 Blast hits to 10834 proteins in 1289 species: Archae - 0; Bacteria - 5319; Metazoa - 1959; Fungi - 659; Plants - 879; Viruses - 0; Other Eukaryotes - 2021 (source: NCBI BLink). & (gnl|cdd|36085 : 178.0) no description available & (p46440|gstf2_tobac : 176.0) Glutathione S-transferase APIC (EC 2.5.1.18) (GST class-phi) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|48114 : 160.0) no description available & (reliability: 500.0) & (original description: Putative gst1, Description = Glutathione S-transferase, PFAM = PF00043;PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf07253_390347-393479' '(at1g65820 : 214.0) microsomal glutathione s-transferase, putative; CONTAINS InterPro DOMAIN/s: Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein (InterPro:IPR001129); Has 388 Blast hits to 388 proteins in 129 species: Archae - 0; Bacteria - 4; Metazoa - 195; Fungi - 88; Plants - 65; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|85252 : 119.0) no description available & (reliability: 428.0) & (original description: Putative MGST3, Description = Microsomal glutathione S-transferase 3, PFAM = PF01124)' T '26.9' 'misc.glutathione S transferases' 'niben101scf07736_390048-400113' '(at5g41210 : 337.0) Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase THETA 1 (GSTT1); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: toxin catabolic process; LOCATED IN: peroxisome, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase THETA 3 (TAIR:AT5G41220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36085 : 158.0) no description available & (gnl|cdd|48110 : 124.0) no description available & (reliability: 674.0) & (original description: Putative GSTT1, Description = Glutathione S-transferase T1, PFAM = PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf08130_36932-40173' '(q03662|gstx1_tobac : 321.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (at3g09270 : 219.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|35627 : 213.0) no description available & (gnl|cdd|48112 : 142.0) no description available & (reliability: 438.0) & (original description: Putative GSTU7, Description = Glutathione S-transferase U7, PFAM = PF02798;PF00043)' T '26.9' 'misc.glutathione S transferases' 'niben101scf08130_55610-58368' '(q03662|gstx1_tobac : 317.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35627 : 222.0) no description available & (at3g09270 : 207.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|48112 : 138.0) no description available & (reliability: 414.0) & (original description: Putative gst7, Description = Tau class glutathione S-transferase, PFAM = PF00043;PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf08196_164694-167429' '(p25317|gstxa_tobac : 422.0) Probable glutathione S-transferase parA (EC 2.5.1.18) (Auxin-regulated protein parA) (STR246C protein) - Nicotiana tabacum (Common tobacco) & (at1g17180 : 294.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 25 (GSTU25); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 24 (TAIR:AT1G17170.1); Has 6324 Blast hits to 6297 proteins in 1135 species: Archae - 0; Bacteria - 2853; Metazoa - 581; Fungi - 157; Plants - 1982; Viruses - 0; Other Eukaryotes - 751 (source: NCBI BLink). & (gnl|cdd|35627 : 249.0) no description available & (gnl|cdd|48112 : 162.0) no description available & (reliability: 588.0) & (original description: Putative gst6, Description = Tau class glutathione S-transferase, PFAM = PF00043;PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf08519_172009-175829' '(gnl|cdd|29388 : 433.0) no description available & (q02200|perx_nicsy : 432.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) - Nicotiana sylvestris (Wood tobacco) & (at1g14550 : 372.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G14540.1); Has 4724 Blast hits to 4696 proteins in 306 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 328; Plants - 4308; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 744.0) & (original description: Putative prx1, Description = Peroxidase, PFAM = PF00141)' T '26.9' 'misc.glutathione S transferases' 'niben101scf09141_52496-55000' '(gnl|cdd|29388 : 171.0) no description available & (p22195|per1_arahy : 151.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g58400 : 147.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T '26.9' 'misc.glutathione S transferases' 'niben101scf09248_342668-346362' '(gnl|cdd|29388 : 421.0) no description available & (p22195|per1_arahy : 336.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g05340 : 312.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 618.0) & (original description: Putative rip1, Description = Peroxidase, PFAM = PF00141)' T '26.9' 'misc.glutathione S transferases' 'niben101scf09516_112010-120306' '(gnl|cdd|36086 : 242.0) no description available & (at2g02390 : 237.0) Encodes glutathione transferase belonging to the zeta class of GSTs. Naming convention according to Wagner et al. (2002). The protein undergoes spontaneous thiolation following treatment with the oxidant tert-butylhydroperoxide.; glutathione S-transferase zeta 1 (GSTZ1); FUNCTIONS IN: glutathione transferase activity, catalytic activity; INVOLVED IN: toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Maleylacetoacetate isomerase (InterPro:IPR005955), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase (class zeta) 2 (TAIR:AT2G02380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p28342|gstz1_diaca : 231.0) Glutathione S-transferase 1 (EC 2.5.1.18) (SR8) (GST class-zeta) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|48118 : 146.0) no description available & (reliability: 474.0) & (original description: Putative gst2, Description = Maleylacetoacetate isomerase, PFAM = PF13417;PF14497)' T '26.9' 'misc.glutathione S transferases' 'niben101scf09516_112318-117001' '(p28342|gstz1_diaca : 131.0) Glutathione S-transferase 1 (EC 2.5.1.18) (SR8) (GST class-zeta) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|36086 : 118.0) no description available & (at2g02390 : 113.0) Encodes glutathione transferase belonging to the zeta class of GSTs. Naming convention according to Wagner et al. (2002). The protein undergoes spontaneous thiolation following treatment with the oxidant tert-butylhydroperoxide.; glutathione S-transferase zeta 1 (GSTZ1); FUNCTIONS IN: glutathione transferase activity, catalytic activity; INVOLVED IN: toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Maleylacetoacetate isomerase (InterPro:IPR005955), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase (class zeta) 2 (TAIR:AT2G02380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative GST2, Description = Glutathione S-transferase 2, PFAM = )' T '26.9' 'misc.glutathione S transferases' 'niben101scf10205_68547-71587' '(q03662|gstx1_tobac : 305.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (at3g09270 : 212.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|35627 : 205.0) no description available & (gnl|cdd|48112 : 147.0) no description available & (reliability: 424.0) & (original description: Putative Sb18, Description = Probable glutathione S-transferase, PFAM = PF00043;PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf10228_84775-88917' '(at5g02790 : 316.0) Glutathione transferase L3 (GSTL3); INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione transferase lambda 1 (TAIR:AT5G02780.1); Has 4064 Blast hits to 3976 proteins in 669 species: Archae - 10; Bacteria - 1017; Metazoa - 669; Fungi - 181; Plants - 1645; Viruses - 0; Other Eukaryotes - 542 (source: NCBI BLink). & (p49248|in21_maize : 270.0) IN2-1 protein - Zea mays (Maize) & (gnl|cdd|48130 : 173.0) no description available & (gnl|cdd|35627 : 171.0) no description available & (reliability: 632.0) & (original description: Putative GSTL3, Description = Glutathione S-transferase L3, PFAM = PF13417;PF13410)' T '26.9' 'misc.glutathione S transferases' 'niben101scf10254_235491-238230' '(gnl|cdd|35627 : 203.0) no description available & (at1g74590 : 198.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 10 (GSTU10); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 9 (TAIR:AT5G62480.1); Has 7913 Blast hits to 7893 proteins in 1194 species: Archae - 0; Bacteria - 4117; Metazoa - 967; Fungi - 129; Plants - 1952; Viruses - 0; Other Eukaryotes - 748 (source: NCBI BLink). & (p32110|gstx6_soybn : 150.0) Probable glutathione S-transferase (EC 2.5.1.18) (Heat shock protein 26A) (G2-4) - Glycine max (Soybean) & (gnl|cdd|48112 : 120.0) no description available & (reliability: 396.0) & (original description: Putative GSTU9, Description = Glutathione S-transferase U9, PFAM = PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf10316_319490-322653' '(q03662|gstx1_tobac : 385.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (at3g09270 : 218.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|35627 : 213.0) no description available & (gnl|cdd|48112 : 142.0) no description available & (reliability: 436.0) & (original description: Putative gst7, Description = Tau class glutathione S-transferase, PFAM = PF00043;PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf10316_324668-326979' '(q03662|gstx1_tobac : 191.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35627 : 150.0) no description available & (at2g29490 : 142.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 1 (GSTU1); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 2 (TAIR:AT2G29480.1); Has 9031 Blast hits to 9013 proteins in 1259 species: Archae - 0; Bacteria - 4823; Metazoa - 1003; Fungi - 192; Plants - 2095; Viruses - 0; Other Eukaryotes - 918 (source: NCBI BLink). & (gnl|cdd|48607 : 121.0) no description available & (reliability: 284.0) & (original description: Putative GST180, Description = Glutathione S-transferase, PFAM = PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf10316_330848-334176' '(q03662|gstx1_tobac : 254.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35627 : 192.0) no description available & (at3g09270 : 181.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 8 (GSTU8); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 7 (TAIR:AT2G29420.1); Has 7045 Blast hits to 7029 proteins in 1100 species: Archae - 0; Bacteria - 3564; Metazoa - 831; Fungi - 183; Plants - 2012; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|48112 : 134.0) no description available & (reliability: 362.0) & (original description: Putative gst7, Description = Tau class glutathione S-transferase, PFAM = PF02798;PF00043)' T '26.9' 'misc.glutathione S transferases' 'niben101scf10465_23522-26807' '(p30109|gstf1_tobac : 416.0) Glutathione S-transferase PARB (EC 2.5.1.18) (GST class-phi) - Nicotiana tabacum (Common tobacco) & (at2g47730 : 253.0) Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase phi 8 (GSTF8); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: in 8 processes; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase PHI 2 (TAIR:AT4G02520.1); Has 15602 Blast hits to 15586 proteins in 1475 species: Archae - 0; Bacteria - 9018; Metazoa - 1960; Fungi - 883; Plants - 1109; Viruses - 0; Other Eukaryotes - 2632 (source: NCBI BLink). & (gnl|cdd|36085 : 172.0) no description available & (gnl|cdd|48114 : 170.0) no description available & (reliability: 506.0) & (original description: Putative PARB, Description = Glutathione S-transferase PARB, PFAM = PF02798;PF00043)' T '26.9' 'misc.glutathione S transferases' 'niben101scf11037_37740-42220' '(p46440|gstf2_tobac : 308.0) Glutathione S-transferase APIC (EC 2.5.1.18) (GST class-phi) - Nicotiana tabacum (Common tobacco) & (at2g47730 : 258.0) Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase phi 8 (GSTF8); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: in 8 processes; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase PHI 2 (TAIR:AT4G02520.1); Has 15602 Blast hits to 15586 proteins in 1475 species: Archae - 0; Bacteria - 9018; Metazoa - 1960; Fungi - 883; Plants - 1109; Viruses - 0; Other Eukaryotes - 2632 (source: NCBI BLink). & (gnl|cdd|36085 : 181.0) no description available & (gnl|cdd|48114 : 179.0) no description available & (reliability: 516.0) & (original description: Putative gst1, Description = Phi class glutathione S-transferase, PFAM = PF02798;PF00043)' T '26.9' 'misc.glutathione S transferases' 'niben101scf11767_235840-239248' '(p49332|gstxc_tobac : 303.0) Probable glutathione S-transferase parC (EC 2.5.1.18) (Auxin-regulated protein parC) - Nicotiana tabacum (Common tobacco) & (at1g78380 : 288.0) Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; glutathione S-transferase TAU 19 (GSTU19); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone, toxin catabolic process, cellular response to water deprivation; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 6888 Blast hits to 6873 proteins in 1203 species: Archae - 0; Bacteria - 3293; Metazoa - 563; Fungi - 167; Plants - 2052; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (gnl|cdd|35627 : 244.0) no description available & (gnl|cdd|48112 : 136.0) no description available & (reliability: 576.0) & (original description: Putative PARC, Description = Probable glutathione S-transferase parC, PFAM = PF13410;PF02798)' T '26.9' 'misc.glutathione S transferases' 'niben101scf13029_354494-357670' '(gnl|cdd|29388 : 389.0) no description available & (at1g44970 : 257.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4592 Blast hits to 4563 proteins in 305 species: Archae - 0; Bacteria - 10; Metazoa - 5; Fungi - 193; Plants - 4307; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (p22195|per1_arahy : 256.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 474.0) & (original description: Putative prx6, Description = Peroxidase, PFAM = PF00141)' T '26.9' 'misc.glutathione S transferases' 'niben101scf15604_49355-55395' '(at2g02390 : 286.0) Encodes glutathione transferase belonging to the zeta class of GSTs. Naming convention according to Wagner et al. (2002). The protein undergoes spontaneous thiolation following treatment with the oxidant tert-butylhydroperoxide.; glutathione S-transferase zeta 1 (GSTZ1); FUNCTIONS IN: glutathione transferase activity, catalytic activity; INVOLVED IN: toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Maleylacetoacetate isomerase (InterPro:IPR005955), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase (class zeta) 2 (TAIR:AT2G02380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36086 : 275.0) no description available & (p28342|gstz1_diaca : 272.0) Glutathione S-transferase 1 (EC 2.5.1.18) (SR8) (GST class-zeta) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|48118 : 154.0) no description available & (reliability: 572.0) & (original description: Putative gst2, Description = Maleylacetoacetate isomerase, PFAM = PF14497;PF13417)' T '26.10' 'misc.cytochrome P450' 'nbv0.3scaffold2433_65368-76063' '(o81970|c71a9_soybn : 556.0) Cytochrome P450 71A9 (EC 1.14.-.-) (P450 CP1) - Glycine max (Soybean) & (gnl|cdd|35378 : 514.0) no description available & (at3g26310 : 422.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 308.0) no description available & (reliability: 844.0) & (original description: Putative CYP71A9, Description = Cytochrome P450 71A9, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.3scaffold2571_1060-6692' '(at2g45550 : 479.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 4" (CYP76C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 1 (TAIR:AT2G45560.1); Has 35109 Blast hits to 34843 proteins in 1784 species: Archae - 57; Bacteria - 4750; Metazoa - 11986; Fungi - 7467; Plants - 9491; Viruses - 6; Other Eukaryotes - 1352 (source: NCBI BLink). & (gnl|cdd|35378 : 433.0) no description available & (p37122|c76a2_solme : 378.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 302.0) no description available & (reliability: 958.0) & (original description: Putative cpr, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.3scaffold3920_36775-40994' '(gnl|cdd|35378 : 467.0) no description available & (q9sbq9|f3ph_pethy : 333.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (at3g48310 : 325.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily A, polypeptide 22" (CYP71A22); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 21 (TAIR:AT3G48320.1); Has 32713 Blast hits to 32486 proteins in 1636 species: Archae - 45; Bacteria - 3163; Metazoa - 11763; Fungi - 7101; Plants - 9557; Viruses - 3; Other Eukaryotes - 1081 (source: NCBI BLink). & (gnl|cdd|84486 : 312.0) no description available & (reliability: 650.0) & (original description: Putative cytochrome P450 CYP736C4, Description = Cytochrome P450 CYP736C4, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.3scaffold4152_19253-24914' '(gnl|cdd|35378 : 447.0) no description available & (at5g10600 : 433.0) member of CYP81K; "cytochrome P450, family 81, subfamily K, polypeptide 2" (CYP81K2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily K, polypeptide 1 (TAIR:AT5G10610.1); Has 31994 Blast hits to 31803 proteins in 1635 species: Archae - 50; Bacteria - 3220; Metazoa - 11846; Fungi - 6519; Plants - 9340; Viruses - 3; Other Eukaryotes - 1016 (source: NCBI BLink). & (gnl|cdd|84486 : 289.0) no description available & (p48418|c75a1_pethy : 286.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (reliability: 866.0) & (original description: Putative TCP3, Description = Cytochrome P450, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.3scaffold6234_54136-58270' '(o48927|c78a3_soybn : 650.0) Cytochrome P450 78A3 (EC 1.14.-.-) - Glycine max (Soybean) & (at2g46660 : 620.0) member of CYP78A; "cytochrome P450, family 78, subfamily A, polypeptide 6" (CYP78A6); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome p450 78a9 (TAIR:AT3G61880.2); Has 32637 Blast hits to 32519 proteins in 1695 species: Archae - 48; Bacteria - 3588; Metazoa - 11617; Fungi - 7095; Plants - 9209; Viruses - 3; Other Eukaryotes - 1077 (source: NCBI BLink). & (gnl|cdd|35378 : 345.0) no description available & (gnl|cdd|84486 : 224.0) no description available & (reliability: 1240.0) & (original description: Putative mnd, Description = Cytochrome P450 78A4, PFAM = PF00067;PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.3scaffold7643_107-4576' '(at1g19630 : 291.0) member of CYP722A; "cytochrome P450, family 722, subfamily A, polypeptide 1" (CYP722A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 1 (TAIR:AT4G19230.1); Has 35375 Blast hits to 35292 proteins in 1804 species: Archae - 63; Bacteria - 6821; Metazoa - 11890; Fungi - 5888; Plants - 8751; Viruses - 3; Other Eukaryotes - 1959 (source: NCBI BLink). & (gnl|cdd|35379 : 269.0) no description available & (gnl|cdd|84486 : 221.0) no description available & (q9axh9|kao1_horvu : 207.0) Ent-kaurenoic acid oxidase 1 (EC 1.14.13.79) (gpr5) - Hordeum vulgare (Barley) & (reliability: 582.0) & (original description: Putative CYP707A, Description = Abscisic acid 8-hydroxylase 3, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.3scaffold8795_15419-19078' '(o81974|c71d8_soybn : 492.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 468.0) no description available & (at3g26310 : 378.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 311.0) no description available & (reliability: 756.0) & (original description: Putative CYP71D20, Description = 5-epiaristolochene 1,3-dihydroxylase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.3scaffold12223_40338-44522' '(gnl|cdd|35378 : 477.0) no description available & (at5g07990 : 371.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (o81973|c93a3_soybn : 359.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 322.0) no description available & (reliability: 730.0) & (original description: Putative f3'h, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.3scaffold13347_33789-37330' '(at5g63450 : 294.0) member of CYP94B; "cytochrome P450, family 94, subfamily B, polypeptide 1" (CYP94B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 3 (TAIR:AT3G48520.1); Has 25811 Blast hits to 25731 proteins in 1391 species: Archae - 44; Bacteria - 2296; Metazoa - 9758; Fungi - 5338; Plants - 7375; Viruses - 3; Other Eukaryotes - 997 (source: NCBI BLink). & (gnl|cdd|35379 : 293.0) no description available & (gnl|cdd|84486 : 171.0) no description available & (o49858|c82a3_soybn : 92.8) Cytochrome P450 82A3 (EC 1.14.-.-) (P450 CP6) - Glycine max (Soybean) & (reliability: 588.0) & (original description: Putative CYP94A1, Description = Cytochrome P450 94A1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.3scaffold22742_21166-28318' '(at1g12740 : 402.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 87, subfamily A, polypeptide 2" (CYP87A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 3 (TAIR:AT1G78490.1). & (q7xu38|c87a3_orysa : 399.0) Cytochrome P450 87A3 (EC 1.14.-.-) - Oryza sativa (Rice) & (gnl|cdd|35379 : 226.0) no description available & (gnl|cdd|84486 : 144.0) no description available & (reliability: 804.0) & (original description: Putative Csa6G088710, Description = Cytochrome P450, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.3scaffold29046_13336-23120' '(o48921|c97b2_soybn : 768.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (at4g15110 : 718.0) member of CYP97B; "cytochrome P450, family 97, subfamily B, polypeptide 3" (CYP97B3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 97, subfamily A, polypeptide 3 (TAIR:AT1G31800.1); Has 31568 Blast hits to 31460 proteins in 1570 species: Archae - 46; Bacteria - 3266; Metazoa - 11509; Fungi - 6986; Plants - 8573; Viruses - 6; Other Eukaryotes - 1182 (source: NCBI BLink). & (gnl|cdd|35379 : 256.0) no description available & (gnl|cdd|84486 : 217.0) no description available & (reliability: 1436.0) & (original description: Putative cpr, Description = Cytochrome P450 97B2, chloroplastic, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.3scaffold37852_214-4947' '(q05047|c72a1_catro : 476.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g14690 : 458.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (gnl|cdd|35379 : 326.0) no description available & (gnl|cdd|84486 : 252.0) no description available & (reliability: 916.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.3scaffold40951_2222-6010' '(at3g48520 : 560.0) member of CYP94B; "cytochrome P450, family 94, subfamily B, polypeptide 3" (CYP94B3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 1 (TAIR:AT5G63450.1); Has 27655 Blast hits to 27536 proteins in 1435 species: Archae - 44; Bacteria - 2616; Metazoa - 10459; Fungi - 5693; Plants - 7745; Viruses - 3; Other Eukaryotes - 1095 (source: NCBI BLink). & (gnl|cdd|35379 : 367.0) no description available & (gnl|cdd|84486 : 210.0) no description available & (q43068|c82a1_pea : 92.8) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (reliability: 1120.0) & (original description: Putative CYP94B3, Description = Cytochrome P450 94B3, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.3scaffold50287_1-2247' '(gnl|cdd|35378 : 192.0) no description available & (at3g52970 : 152.0) member of CYP76G; "cytochrome P450, family 76, subfamily G, polypeptide 1" (CYP76G1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1). & (p37122|c76a2_solme : 137.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 116.0) no description available & (reliability: 304.0) & (original description: Putative cpr, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.3scaffold54195_7171-12249' '(o49859|c82a4_soybn : 426.0) Cytochrome P450 82A4 (EC 1.14.-.-) (P450 CP9) - Glycine max (Soybean) & (gnl|cdd|35378 : 409.0) no description available & (at4g31940 : 393.0) member of CYP82C; "cytochrome P450, family 82, subfamily C, polypeptide 4" (CYP82C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 82, subfamily C, polypeptide 2 (TAIR:AT4G31970.1); Has 33616 Blast hits to 33393 proteins in 1726 species: Archae - 49; Bacteria - 3806; Metazoa - 11816; Fungi - 7242; Plants - 9457; Viruses - 3; Other Eukaryotes - 1243 (source: NCBI BLink). & (gnl|cdd|84486 : 264.0) no description available & (reliability: 786.0) & (original description: Putative CYP82A4, Description = Cytochrome P450 82A4, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.3scaffold56090_1-5756' '(at3g14690 : 191.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 172.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 80.1) no description available & (reliability: 382.0) & (original description: Putative SCS, Description = Secologanin synthase, PFAM = )' T '26.10' 'misc.cytochrome P450' 'nbv0.3scaffold58668_6674-10668' '(gnl|cdd|35378 : 476.0) no description available & (at4g37370 : 470.0) member of CYP81D; "cytochrome P450, family 81, subfamily D, polypeptide 8" (CYP81D8); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to karrikin; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 3 (TAIR:AT4G37340.1); Has 35915 Blast hits to 35767 proteins in 1837 species: Archae - 61; Bacteria - 5629; Metazoa - 11821; Fungi - 7460; Plants - 9456; Viruses - 3; Other Eukaryotes - 1485 (source: NCBI BLink). & (gnl|cdd|84486 : 306.0) no description available & (q43068|c82a1_pea : 302.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (reliability: 940.0) & (original description: Putative CYP81E1, Description = Isoflavone 2'-hydroxylase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.3scaffold72913_2043-7214' '(o49858|c82a3_soybn : 431.0) Cytochrome P450 82A3 (EC 1.14.-.-) (P450 CP6) - Glycine max (Soybean) & (at4g31940 : 426.0) member of CYP82C; "cytochrome P450, family 82, subfamily C, polypeptide 4" (CYP82C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 82, subfamily C, polypeptide 2 (TAIR:AT4G31970.1); Has 33616 Blast hits to 33393 proteins in 1726 species: Archae - 49; Bacteria - 3806; Metazoa - 11816; Fungi - 7242; Plants - 9457; Viruses - 3; Other Eukaryotes - 1243 (source: NCBI BLink). & (gnl|cdd|35378 : 418.0) no description available & (gnl|cdd|84486 : 277.0) no description available & (reliability: 852.0) & (original description: Putative cyp82an1, Description = Cytochrome P450 82an1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.3scaffold78719_751-7419' '(q05047|c72a1_catro : 564.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g14690 : 563.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (gnl|cdd|35379 : 327.0) no description available & (gnl|cdd|84486 : 217.0) no description available & (reliability: 1126.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.3scaffold80774_3316-7005' '(at5g36110 : 338.0) member of CYP716A; "cytochrome P450, family 716, subfamily A, polypeptide 1" (CYP716A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 2 (TAIR:AT5G36140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 274.0) no description available & (q94iw5|c90d2_orysa : 232.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|84486 : 209.0) no description available & (reliability: 676.0) & (original description: Putative CYP716B2, Description = Cytochrome P450 716B2, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.3scaffold86025_2095-5645' '(at4g39490 : 475.0) member of CYP96A; "cytochrome P450, family 96, subfamily A, polypeptide 10" (CYP96A10); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 96, subfamily A, polypeptide 9 (TAIR:AT4G39480.1); Has 28273 Blast hits to 28182 proteins in 1460 species: Archae - 44; Bacteria - 2431; Metazoa - 10638; Fungi - 6078; Plants - 7933; Viruses - 3; Other Eukaryotes - 1146 (source: NCBI BLink). & (gnl|cdd|35379 : 308.0) no description available & (gnl|cdd|84486 : 165.0) no description available & (o48921|c97b2_soybn : 102.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 950.0) & (original description: Putative CYP96A15, Description = Alkane hydroxylase MAH1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.3scaffold108296_1-3114' '(o81974|c71d8_soybn : 496.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 466.0) no description available & (at3g26310 : 373.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 301.0) no description available & (reliability: 746.0) & (original description: Putative CYP71D55, Description = Premnaspirodiene oxygenase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.5scaffold124_173733-180425' '(at3g19270 : 631.0) Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family.; "cytochrome P450, family 707, subfamily A, polypeptide 4" (CYP707A4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 1 (TAIR:AT4G19230.1); Has 34460 Blast hits to 34219 proteins in 1800 species: Archae - 82; Bacteria - 7577; Metazoa - 11415; Fungi - 5354; Plants - 8009; Viruses - 6; Other Eukaryotes - 2017 (source: NCBI BLink). & (gnl|cdd|35379 : 266.0) no description available & (q69f95|c85a_phavu : 252.0) Cytochrome P450 85A (EC 1.14.-.-) (C6-oxidase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|32307 : 218.0) no description available & (reliability: 1262.0) & (original description: Putative CYP707A5, Description = Abscisic acid 8'-hydroxylase 1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.5scaffold203_3342-710306' '(at4g31940 : 459.0) member of CYP82C; "cytochrome P450, family 82, subfamily C, polypeptide 4" (CYP82C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 82, subfamily C, polypeptide 2 (TAIR:AT4G31970.1); Has 33616 Blast hits to 33393 proteins in 1726 species: Archae - 49; Bacteria - 3806; Metazoa - 11816; Fungi - 7242; Plants - 9457; Viruses - 3; Other Eukaryotes - 1243 (source: NCBI BLink). & (o49858|c82a3_soybn : 426.0) Cytochrome P450 82A3 (EC 1.14.-.-) (P450 CP6) - Glycine max (Soybean) & (gnl|cdd|35378 : 393.0) no description available & (gnl|cdd|84486 : 264.0) no description available & (reliability: 918.0) & (original description: Putative CYP82, Description = Cytochrome P450 82A3, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.5scaffold239_832882-875831' '(at5g24910 : 594.0) member of CYP714A; "cytochrome P450, family 714, subfamily A, polypeptide 1" (CYP714A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 714, subfamily A, polypeptide 2 (TAIR:AT5G24900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35379 : 323.0) no description available & (q05047|c72a1_catro : 249.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|84486 : 239.0) no description available & (reliability: 1188.0) & (original description: Putative CYP714A1, Description = Cytochrome P450 714A1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.5scaffold955_289108-304173' '(gnl|cdd|35378 : 443.0) no description available & (at2g45550 : 401.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 4" (CYP76C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 1 (TAIR:AT2G45560.1); Has 35109 Blast hits to 34843 proteins in 1784 species: Archae - 57; Bacteria - 4750; Metazoa - 11986; Fungi - 7467; Plants - 9491; Viruses - 6; Other Eukaryotes - 1352 (source: NCBI BLink). & (p37122|c76a2_solme : 352.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 317.0) no description available & (reliability: 802.0) & (original description: Putative gfh2, Description = Putative ripening-related P-450 enzyme, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.5scaffold1063_1-27979' '(at5g05260 : 177.0) Encodes cytochrome P450 CYP79A2.; cytochrome p450 79a2 (CYP79A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene (TAIR:AT5G35917.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43135|c79a1_sorbi : 175.0) Cytochrome P450 79A1 (EC 1.14.13.41) (Tyrosine N-monooxygenase) (Cytochrome P450Tyr) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (gnl|cdd|35378 : 116.0) no description available & (gnl|cdd|84486 : 103.0) no description available & (reliability: 354.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.5scaffold2295_121689-125519' '(o81974|c71d8_soybn : 447.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 446.0) no description available & (at3g26300 : 369.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 34" (CYP71B34); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 35 (TAIR:AT3G26310.1); Has 33336 Blast hits to 33083 proteins in 1708 species: Archae - 50; Bacteria - 3521; Metazoa - 12043; Fungi - 6985; Plants - 9537; Viruses - 3; Other Eukaryotes - 1197 (source: NCBI BLink). & (gnl|cdd|84486 : 299.0) no description available & (reliability: 738.0) & (original description: Putative CYP71D10, Description = Cytochrome P450 71D10, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.5scaffold2872_25028-35077' '(o48921|c97b2_soybn : 894.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (at4g15110 : 838.0) member of CYP97B; "cytochrome P450, family 97, subfamily B, polypeptide 3" (CYP97B3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 97, subfamily A, polypeptide 3 (TAIR:AT1G31800.1); Has 31568 Blast hits to 31460 proteins in 1570 species: Archae - 46; Bacteria - 3266; Metazoa - 11509; Fungi - 6986; Plants - 8573; Viruses - 6; Other Eukaryotes - 1182 (source: NCBI BLink). & (gnl|cdd|35379 : 306.0) no description available & (gnl|cdd|84486 : 250.0) no description available & (reliability: 1676.0) & (original description: Putative cpr, Description = Cytochrome P450 97B2, chloroplastic, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.5scaffold3315_112031-118306' '(at1g12740 : 264.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 87, subfamily A, polypeptide 2" (CYP87A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 3 (TAIR:AT1G78490.1). & (q7xu38|c87a3_orysa : 187.0) Cytochrome P450 87A3 (EC 1.14.-.-) - Oryza sativa (Rice) & (gnl|cdd|35379 : 140.0) no description available & (gnl|cdd|84486 : 128.0) no description available & (reliability: 528.0) & (original description: Putative Csa1G044890, Description = Predicted protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.5scaffold3490_20830-26355' '(q6f4f5|c724b_orysa : 415.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (at3g50660 : 344.0) Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate.; DWARF 4 (DWF4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G05690.1); Has 31120 Blast hits to 31036 proteins in 1650 species: Archae - 61; Bacteria - 5303; Metazoa - 10591; Fungi - 5722; Plants - 7996; Viruses - 3; Other Eukaryotes - 1444 (source: NCBI BLink). & (gnl|cdd|35379 : 214.0) no description available & (gnl|cdd|84486 : 147.0) no description available & (reliability: 652.0) & (original description: Putative CYP724B1, Description = Cytochrome P450 724B1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.5scaffold3490_20854-26182' '(q6f4f5|c724b_orysa : 349.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (at5g14400 : 315.0) member of CYP724A; "cytochrome P450, family 724, subfamily A, polypeptide 1" (CYP724A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT3G50660.1); Has 22938 Blast hits to 22894 proteins in 1383 species: Archae - 43; Bacteria - 3025; Metazoa - 8566; Fungi - 3762; Plants - 6637; Viruses - 3; Other Eukaryotes - 902 (source: NCBI BLink). & (gnl|cdd|35379 : 182.0) no description available & (gnl|cdd|32307 : 119.0) no description available & (reliability: 630.0) & (original description: Putative D11, Description = Cytochrome P450 724B1, PFAM = PF00067;PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.5scaffold3993_121091-125085' '(at2g42250 : 440.0) member of CYP712A; "cytochrome P450, family 712, subfamily A, polypeptide 1" (CYP712A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 712, subfamily A, polypeptide 2 (TAIR:AT5G06905.1); Has 33836 Blast hits to 33605 proteins in 1717 species: Archae - 51; Bacteria - 3923; Metazoa - 11889; Fungi - 7248; Plants - 9502; Viruses - 6; Other Eukaryotes - 1217 (source: NCBI BLink). & (gnl|cdd|35378 : 423.0) no description available & (q42798|c93a1_soybn : 363.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|84486 : 281.0) no description available & (reliability: 880.0) & (original description: Putative CYP93A1, Description = 3,9-dihydroxypterocarpan 6A-monooxygenase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.5scaffold3993_121195-127551' '(at2g42250 : 406.0) member of CYP712A; "cytochrome P450, family 712, subfamily A, polypeptide 1" (CYP712A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 712, subfamily A, polypeptide 2 (TAIR:AT5G06905.1); Has 33836 Blast hits to 33605 proteins in 1717 species: Archae - 51; Bacteria - 3923; Metazoa - 11889; Fungi - 7248; Plants - 9502; Viruses - 6; Other Eukaryotes - 1217 (source: NCBI BLink). & (gnl|cdd|35378 : 379.0) no description available & (q42798|c93a1_soybn : 314.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|84486 : 264.0) no description available & (reliability: 812.0) & (original description: Putative CYP712A1, Description = Cytochrome P450 93A1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.5scaffold3993_121335-125040' '(gnl|cdd|35378 : 270.0) no description available & (at2g42250 : 228.0) member of CYP712A; "cytochrome P450, family 712, subfamily A, polypeptide 1" (CYP712A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 712, subfamily A, polypeptide 2 (TAIR:AT5G06905.1); Has 33836 Blast hits to 33605 proteins in 1717 species: Archae - 51; Bacteria - 3923; Metazoa - 11889; Fungi - 7248; Plants - 9502; Viruses - 6; Other Eukaryotes - 1217 (source: NCBI BLink). & (gnl|cdd|84486 : 212.0) no description available & (q42799|c93a2_soybn : 202.0) Cytochrome P450 93A2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 456.0) & (original description: Putative BnaC01g43750D, Description = BnaC01g43750D protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.5scaffold4422_81564-90729' '(p37116|ncpr_phaau : 536.0) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Phaseolus aureus (Mung bean) (Vigna radiata) & (at4g24520 : 508.0) Encodes a cyp450 reductase likely to be involved in phenylpropanoid metabolism.; P450 reductase 1 (ATR1); CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADPH Cytochrome P450 Reductase (InterPro:IPR015702); BEST Arabidopsis thaliana protein match is: P450 reductase 2 (TAIR:AT4G30210.2). & (gnl|cdd|36373 : 384.0) no description available & (gnl|cdd|30718 : 281.0) no description available & (reliability: 1016.0) & (original description: Putative CYR, Description = NADPH-cytochrome P450 reductase, PFAM = PF00667;PF00175)' T '26.10' 'misc.cytochrome P450' 'nbv0.5scaffold4992_151459-154076' '(o81974|c71d8_soybn : 249.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 226.0) no description available & (at3g26300 : 203.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 34" (CYP71B34); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 35 (TAIR:AT3G26310.1); Has 33336 Blast hits to 33083 proteins in 1708 species: Archae - 50; Bacteria - 3521; Metazoa - 12043; Fungi - 6985; Plants - 9537; Viruses - 3; Other Eukaryotes - 1197 (source: NCBI BLink). & (gnl|cdd|84486 : 185.0) no description available & (reliability: 406.0) & (original description: Putative CYP4, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.5scaffold5669_589-3581' '(gnl|cdd|35378 : 139.0) no description available & (at1g01280 : 129.0) member of CYP703A CYP703A2 is expressed specifically in anthers of land plants, catalyzing the in-chain hydroxylation at the C-7 position of medium-chain saturated fatty acids (lauric acid in-chain hydroxylase) which is involved in pollen development (sporopollenin synthesis).; "cytochrome P450, family 703, subfamily A, polypeptide 2" (CYP703A2); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, oxygen binding; INVOLVED IN: medium-chain fatty acid metabolic process, pollen wall assembly, medium-chain fatty acid biosynthetic process, sporopollenin biosynthetic process, pollen exine formation; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G07990.1); Has 29652 Blast hits to 29399 proteins in 1569 species: Archae - 44; Bacteria - 2451; Metazoa - 11172; Fungi - 6019; Plants - 9091; Viruses - 3; Other Eukaryotes - 872 (source: NCBI BLink). & (q42798|c93a1_soybn : 123.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|84486 : 81.9) no description available & (reliability: 258.0) & (original description: Putative cyp07, Description = Flavonoid 3'-monooxygenase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.5scaffold7809_14130-18396' '(at5g36110 : 330.0) member of CYP716A; "cytochrome P450, family 716, subfamily A, polypeptide 1" (CYP716A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 2 (TAIR:AT5G36140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 258.0) no description available & (q94iw5|c90d2_orysa : 213.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|84486 : 197.0) no description available & (reliability: 660.0) & (original description: Putative Sb08g017540, Description = Putative uncharacterized protein Sb08g017540, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'nbv0.5scaffold8166_18812-24618' '(at3g19270 : 673.0) Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family.; "cytochrome P450, family 707, subfamily A, polypeptide 4" (CYP707A4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 1 (TAIR:AT4G19230.1); Has 34460 Blast hits to 34219 proteins in 1800 species: Archae - 82; Bacteria - 7577; Metazoa - 11415; Fungi - 5354; Plants - 8009; Viruses - 6; Other Eukaryotes - 2017 (source: NCBI BLink). & (gnl|cdd|35379 : 280.0) no description available & (q69f95|c85a_phavu : 243.0) Cytochrome P450 85A (EC 1.14.-.-) (C6-oxidase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|84486 : 210.0) no description available & (reliability: 1346.0) & (original description: Putative CYP707A4, Description = Abscisic acid 8'-hydroxylase 4, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00000377ctg036_597-4275' '(gnl|cdd|35379 : 309.0) no description available & (at5g63450 : 286.0) member of CYP94B; "cytochrome P450, family 94, subfamily B, polypeptide 1" (CYP94B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 3 (TAIR:AT3G48520.1); Has 25811 Blast hits to 25731 proteins in 1391 species: Archae - 44; Bacteria - 2296; Metazoa - 9758; Fungi - 5338; Plants - 7375; Viruses - 3; Other Eukaryotes - 997 (source: NCBI BLink). & (gnl|cdd|84486 : 171.0) no description available & (o48921|c97b2_soybn : 81.6) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 572.0) & (original description: Putative CYP94A2, Description = Cytochrome P450 94A2, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00000397ctg016_1-2540' '(at5g35917 : 254.0) a pseudogene with cytochrome P450 domain; "cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene" (CYP79A3P); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome p450 79a2 (TAIR:AT5G05260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o81345|c79b1_sinal : 229.0) Cytochrome P450 79B1 (EC 1.14.-.-) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|35378 : 143.0) no description available & (reliability: 508.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00000622ctg018_2112-5411' '(at1g12740 : 215.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 87, subfamily A, polypeptide 2" (CYP87A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 3 (TAIR:AT1G78490.1). & (q7xu38|c87a3_orysa : 195.0) Cytochrome P450 87A3 (EC 1.14.-.-) - Oryza sativa (Rice) & (gnl|cdd|35379 : 88.9) no description available & (reliability: 430.0) & (original description: Putative CYP87A2, Description = Cytochrome P450, putative, PFAM = )' T '26.10' 'misc.cytochrome P450' 'niben044scf00001215ctg010_1337-8229' '(p37117|c71a4_solme : 446.0) Cytochrome P450 71A4 (EC 1.14.-.-) (CYPLXXIA4) (P-450EG2) - Solanum melongena (Eggplant) (Aubergine) & (at3g48280 : 308.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily A, polypeptide 25" (CYP71A25); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 26 (TAIR:AT3G48270.1); Has 32582 Blast hits to 32347 proteins in 1656 species: Archae - 46; Bacteria - 3283; Metazoa - 11769; Fungi - 6829; Plants - 9594; Viruses - 3; Other Eukaryotes - 1058 (source: NCBI BLink). & (gnl|cdd|35378 : 294.0) no description available & (gnl|cdd|84486 : 230.0) no description available & (reliability: 616.0) & (original description: Putative CYP71A25, Description = Cytochrome P450 71A25, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00001425ctg017_507-4093' '(at2g27690 : 587.0) Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment.; "cytochrome P450, family 94, subfamily C, polypeptide 1" (CYP94C1); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 3 (TAIR:AT3G48520.1); Has 28009 Blast hits to 27927 proteins in 1460 species: Archae - 46; Bacteria - 2607; Metazoa - 10748; Fungi - 6059; Plants - 7560; Viruses - 3; Other Eukaryotes - 986 (source: NCBI BLink). & (gnl|cdd|35379 : 317.0) no description available & (gnl|cdd|84486 : 173.0) no description available & (q43068|c82a1_pea : 102.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (reliability: 1174.0) & (original description: Putative CYP94C1, Description = Cytochrome P450 94C1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00002011ctg016_61-2988' '(gnl|cdd|35378 : 229.0) no description available & (at5g07990 : 179.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (p48418|c75a1_pethy : 172.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 114.0) no description available & (reliability: 324.0) & (original description: Putative cyp07, Description = Flavonoid 3'-monooxygenase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00004419ctg015_731-4278' '(at1g64940 : 582.0) member of CYP89A; "cytochrome P450, family 87, subfamily A, polypeptide 6" (CYP89A6); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 89, subfamily A, polypeptide 5 (TAIR:AT1G64950.1); Has 33831 Blast hits to 33673 proteins in 1720 species: Archae - 52; Bacteria - 4308; Metazoa - 11763; Fungi - 7071; Plants - 9227; Viruses - 3; Other Eukaryotes - 1407 (source: NCBI BLink). & (gnl|cdd|35378 : 403.0) no description available & (p37123|c77a1_solme : 379.0) Cytochrome P450 77A1 (EC 1.14.-.-) (CYPLXXVIIA1) (P-450EG6) (Fragment) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 282.0) no description available & (reliability: 1164.0) & (original description: Putative CYP89A2, Description = Cytochrome P450 89A2, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00004699ctg009_1-2393' '(gnl|cdd|35378 : 193.0) no description available & (at3g61040 : 160.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 76, subfamily C, polypeptide 7" (CYP76C7); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 24977 Blast hits to 24851 proteins in 1464 species: Archae - 37; Bacteria - 1915; Metazoa - 9795; Fungi - 4683; Plants - 7828; Viruses - 0; Other Eukaryotes - 719 (source: NCBI BLink). & (p37122|c76a2_solme : 111.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 104.0) no description available & (reliability: 320.0) & (original description: Putative gfh2, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00004699ctg011_5321-8023' '(gnl|cdd|35378 : 134.0) no description available & (at3g61040 : 106.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 76, subfamily C, polypeptide 7" (CYP76C7); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 24977 Blast hits to 24851 proteins in 1464 species: Archae - 37; Bacteria - 1915; Metazoa - 9795; Fungi - 4683; Plants - 7828; Viruses - 0; Other Eukaryotes - 719 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative gfh2, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00005299ctg018_1058-2981' '(at2g45570 : 273.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 2" (CYP76C2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, sepal, male gametophyte, carpel, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 34313 Blast hits to 34043 proteins in 1718 species: Archae - 48; Bacteria - 4021; Metazoa - 12101; Fungi - 7308; Plants - 9587; Viruses - 3; Other Eukaryotes - 1245 (source: NCBI BLink). & (gnl|cdd|35378 : 252.0) no description available & (q9sbq9|f3ph_pethy : 234.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 203.0) no description available & (reliability: 546.0) & (original description: Putative cpr, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00005299ctg020_1124-2876' '(gnl|cdd|35378 : 118.0) no description available & (at2g45560 : 117.0) cytochrome P450 monooxygenase; "cytochrome P450, family 76, subfamily C, polypeptide 1" (CYP76C1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 9073 Blast hits to 9044 proteins in 509 species: Archae - 15; Bacteria - 32; Metazoa - 3543; Fungi - 403; Plants - 4946; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink). & (o81970|c71a9_soybn : 85.9) Cytochrome P450 71A9 (EC 1.14.-.-) (P450 CP1) - Glycine max (Soybean) & (reliability: 234.0) & (original description: Putative gfh2, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00010902ctg014_11829-16391' '(at5g52400 : 233.0) member of CYP715A; "cytochrome P450, family 715, subfamily A, polypeptide 1" (CYP715A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 735, subfamily A, polypeptide 1 (TAIR:AT5G38450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35379 : 139.0) no description available & (q05047|c72a1_catro : 114.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|84486 : 113.0) no description available & (reliability: 466.0) & (original description: Putative cyp, Description = Cytochrome P450 family 72 protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00011309ctg033_12992-17058' '(at3g48520 : 563.0) member of CYP94B; "cytochrome P450, family 94, subfamily B, polypeptide 3" (CYP94B3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 1 (TAIR:AT5G63450.1); Has 27655 Blast hits to 27536 proteins in 1435 species: Archae - 44; Bacteria - 2616; Metazoa - 10459; Fungi - 5693; Plants - 7745; Viruses - 3; Other Eukaryotes - 1095 (source: NCBI BLink). & (gnl|cdd|35379 : 369.0) no description available & (gnl|cdd|84486 : 212.0) no description available & (q43068|c82a1_pea : 92.4) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (reliability: 1126.0) & (original description: Putative CYP450A, Description = Cytochrome P450 A, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00011570ctg011_39967-42778' '(at5g24910 : 215.0) member of CYP714A; "cytochrome P450, family 714, subfamily A, polypeptide 1" (CYP714A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 714, subfamily A, polypeptide 2 (TAIR:AT5G24900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35379 : 140.0) no description available & (q05047|c72a1_catro : 123.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|84486 : 99.2) no description available & (reliability: 430.0) & (original description: Putative CYP714C2, Description = Cytochrome P450 734A6, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00012339ctg003_1-3379' '(at5g10600 : 188.0) member of CYP81K; "cytochrome P450, family 81, subfamily K, polypeptide 2" (CYP81K2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily K, polypeptide 1 (TAIR:AT5G10610.1); Has 31994 Blast hits to 31803 proteins in 1635 species: Archae - 50; Bacteria - 3220; Metazoa - 11846; Fungi - 6519; Plants - 9340; Viruses - 3; Other Eukaryotes - 1016 (source: NCBI BLink). & (gnl|cdd|35378 : 183.0) no description available & (gnl|cdd|84486 : 132.0) no description available & (p37120|c75a2_solme : 113.0) Flavonoid 3',5'-hydroxylase (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A2) (CYPLXXVA2) (P-450EG1) - Solanum melongena (Eggplant) (Aubergine) & (reliability: 376.0) & (original description: Putative CYP1, Description = Isoflavone 2'-hydroxylase, PFAM = PF00067;PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00013814ctg008_5098-15700' '(o48921|c97b2_soybn : 803.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (at4g15110 : 753.0) member of CYP97B; "cytochrome P450, family 97, subfamily B, polypeptide 3" (CYP97B3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 97, subfamily A, polypeptide 3 (TAIR:AT1G31800.1); Has 31568 Blast hits to 31460 proteins in 1570 species: Archae - 46; Bacteria - 3266; Metazoa - 11509; Fungi - 6986; Plants - 8573; Viruses - 6; Other Eukaryotes - 1182 (source: NCBI BLink). & (gnl|cdd|35379 : 271.0) no description available & (gnl|cdd|84486 : 225.0) no description available & (reliability: 1506.0) & (original description: Putative cpr, Description = Cytochrome P450 97B2, chloroplastic, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00015844ctg007_1-2714' '(at5g10600 : 236.0) member of CYP81K; "cytochrome P450, family 81, subfamily K, polypeptide 2" (CYP81K2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily K, polypeptide 1 (TAIR:AT5G10610.1); Has 31994 Blast hits to 31803 proteins in 1635 species: Archae - 50; Bacteria - 3220; Metazoa - 11846; Fungi - 6519; Plants - 9340; Viruses - 3; Other Eukaryotes - 1016 (source: NCBI BLink). & (gnl|cdd|35378 : 209.0) no description available & (p37119|c71a3_solme : 124.0) Cytochrome P450 71A3 (EC 1.14.-.-) (CYPLXXIA3) (P-450EG3) (Fragment) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 105.0) no description available & (reliability: 472.0) & (original description: Putative CYP1, Description = Cytochrome P450, putative, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00017049ctg005_2022-6068' '(gnl|cdd|35378 : 458.0) no description available & (at5g10600 : 446.0) member of CYP81K; "cytochrome P450, family 81, subfamily K, polypeptide 2" (CYP81K2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily K, polypeptide 1 (TAIR:AT5G10610.1); Has 31994 Blast hits to 31803 proteins in 1635 species: Archae - 50; Bacteria - 3220; Metazoa - 11846; Fungi - 6519; Plants - 9340; Viruses - 3; Other Eukaryotes - 1016 (source: NCBI BLink). & (q43068|c82a1_pea : 303.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (gnl|cdd|84486 : 280.0) no description available & (reliability: 892.0) & (original description: Putative CYP81E8, Description = Cytochrome P450 81E8, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00018310ctg006_2187-4954' '(gnl|cdd|35378 : 175.0) no description available & (at3g48300 : 117.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily A, polypeptide 23" (CYP71A23); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 26 (TAIR:AT3G48270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o81973|c93a3_soybn : 112.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 97.3) no description available & (reliability: 234.0) & (original description: Putative CYP9, Description = Cytochrome P450 750A1 family, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00020290ctg012_296-14489' '(q05047|c72a1_catro : 255.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g14690 : 248.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (gnl|cdd|35379 : 179.0) no description available & (gnl|cdd|84486 : 143.0) no description available & (reliability: 496.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00021169ctg005_7918-12308' '(o81974|c71d8_soybn : 501.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 467.0) no description available & (at3g26310 : 390.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 309.0) no description available & (reliability: 780.0) & (original description: Putative CYP71D20, Description = 5-epiaristolochene 1,3-dihydroxylase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00021967ctg015_1-4501' '(q05047|c72a1_catro : 399.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g14690 : 397.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (gnl|cdd|35379 : 258.0) no description available & (gnl|cdd|84486 : 189.0) no description available & (reliability: 794.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00023760ctg000_4940-9536' '(at5g52400 : 309.0) member of CYP715A; "cytochrome P450, family 715, subfamily A, polypeptide 1" (CYP715A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 735, subfamily A, polypeptide 1 (TAIR:AT5G38450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35379 : 163.0) no description available & (q05047|c72a1_catro : 138.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|84486 : 131.0) no description available & (reliability: 618.0) & (original description: Putative cyp, Description = Cytochrome P450 family 72 protein, PFAM = PF00067;PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00025586ctg005_2738-7488' '(at4g31970 : 444.0) member of CYP82C; "cytochrome P450, family 82, subfamily C, polypeptide 2" (CYP82C2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 82, subfamily C, polypeptide 4 (TAIR:AT4G31940.1); Has 33251 Blast hits to 33030 proteins in 1722 species: Archae - 60; Bacteria - 4009; Metazoa - 11748; Fungi - 6717; Plants - 9506; Viruses - 3; Other Eukaryotes - 1208 (source: NCBI BLink). & (gnl|cdd|35378 : 428.0) no description available & (o49859|c82a4_soybn : 402.0) Cytochrome P450 82A4 (EC 1.14.-.-) (P450 CP9) - Glycine max (Soybean) & (gnl|cdd|84486 : 268.0) no description available & (reliability: 888.0) & (original description: Putative CYP82E1, Description = Elicitor-inducible cytochrome P450, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00026213ctg008_373-10949' '(at4g19230 : 750.0) Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy.; "cytochrome P450, family 707, subfamily A, polypeptide 1" (CYP707A1); FUNCTIONS IN: oxygen binding, (+)-abscisic acid 8'-hydroxylase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 3 (TAIR:AT5G45340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35379 : 297.0) no description available & (q8gsq1|c85a1_orysa : 264.0) Cytochrome P450 85A1 (EC 1.14.-.-) (C6-oxidase) (OsDWARF) (Dwarf protein) - Oryza sativa (Rice) & (gnl|cdd|84486 : 222.0) no description available & (reliability: 1474.0) & (original description: Putative CYP707A1, Description = Abscisic acid 8'-hydroxylase 1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00029569ctg003_14856-19075' '(gnl|cdd|35378 : 480.0) no description available & (q9sbq9|f3ph_pethy : 343.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (at5g57260 : 337.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 10" (CYP71B10); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32483 Blast hits to 32205 proteins in 1643 species: Archae - 48; Bacteria - 3002; Metazoa - 11999; Fungi - 6846; Plants - 9547; Viruses - 3; Other Eukaryotes - 1038 (source: NCBI BLink). & (gnl|cdd|84486 : 324.0) no description available & (reliability: 674.0) & (original description: Putative CYP9, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00031840ctg006_1745-4857' '(at3g14650 : 224.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 11" (CYP72A11); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 15 (TAIR:AT3G14690.1); Has 31600 Blast hits to 31456 proteins in 1608 species: Archae - 67; Bacteria - 4692; Metazoa - 11270; Fungi - 6107; Plants - 8058; Viruses - 3; Other Eukaryotes - 1403 (source: NCBI BLink). & (q05047|c72a1_catro : 208.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 112.0) no description available & (reliability: 448.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00032167ctg002_7801-11619' '(o81974|c71d8_soybn : 512.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 460.0) no description available & (at3g26310 : 380.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 306.0) no description available & (reliability: 760.0) & (original description: Putative imt-5, Description = Cytochrome P450, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00033295ctg000_5974-13599' '(q05001|ncpr_catro : 1009.0) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g30210 : 951.0) Encodes NADPH-cytochrome P450 reductase that catalyzes the first oxidative step of the phenylpropanoid general pathway.; P450 reductase 2 (ATR2); FUNCTIONS IN: NADPH-hemoprotein reductase activity; INVOLVED IN: phenylpropanoid metabolic process; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADPH Cytochrome P450 Reductase (InterPro:IPR015702); BEST Arabidopsis thaliana protein match is: P450 reductase 1 (TAIR:AT4G24520.1); Has 6728 Blast hits to 6356 proteins in 1574 species: Archae - 5; Bacteria - 3354; Metazoa - 1038; Fungi - 894; Plants - 570; Viruses - 0; Other Eukaryotes - 867 (source: NCBI BLink). & (gnl|cdd|36373 : 627.0) no description available & (gnl|cdd|30718 : 421.0) no description available & (reliability: 1902.0) & (original description: Putative cpr2, Description = NADPH--cytochrome P450 reductase, PFAM = PF00175;PF00258;PF00667)' T '26.10' 'misc.cytochrome P450' 'niben044scf00036341ctg000_53380-57683' '(at5g36110 : 258.0) member of CYP716A; "cytochrome P450, family 716, subfamily A, polypeptide 1" (CYP716A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 2 (TAIR:AT5G36140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 159.0) no description available & (q94iw5|c90d2_orysa : 119.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|32307 : 117.0) no description available & (reliability: 516.0) & (original description: Putative ATH1, Description = Cytochrome P450, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00037627ctg001_1-2771' '(at5g36140 : 248.0) member of CYP716A; "cytochrome P450, family 716, subfamily A, polypeptide 2" (CYP716A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 1 (TAIR:AT5G36110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 109.0) no description available & (q6f4f5|c724b_orysa : 95.1) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (reliability: 496.0) & (original description: Putative CYP716A2, Description = Cytochrome P450, family 716, subfamily A, polypeptide 2, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00038148ctg006_1-1765' '(at1g75130 : 175.0) member of CYP721A; "cytochrome P450, family 721, subfamily A, polypeptide 1" (CYP721A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT2G26710.1); Has 31101 Blast hits to 31007 proteins in 1591 species: Archae - 75; Bacteria - 4273; Metazoa - 11060; Fungi - 6215; Plants - 8065; Viruses - 3; Other Eukaryotes - 1410 (source: NCBI BLink). & (q05047|c72a1_catro : 160.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 144.0) no description available & (gnl|cdd|84486 : 111.0) no description available & (reliability: 350.0) & (original description: Putative BAS1, Description = Secologanin synthase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00038435ctg001_5155-10654' '(at3g14690 : 595.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 543.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 347.0) no description available & (gnl|cdd|84486 : 237.0) no description available & (reliability: 1190.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00041503ctg002_25117-27790' '(at1g64930 : 171.0) member of CYP89A; "cytochrome P450, family 87, subfamily A, polypeptide 7" (CYP89A7); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 87, subfamily A, polypeptide 6 (TAIR:AT1G64940.1); Has 33349 Blast hits to 33201 proteins in 1685 species: Archae - 50; Bacteria - 3939; Metazoa - 11722; Fungi - 7059; Plants - 9217; Viruses - 3; Other Eukaryotes - 1359 (source: NCBI BLink). & (p37123|c77a1_solme : 122.0) Cytochrome P450 77A1 (EC 1.14.-.-) (CYPLXXVIIA1) (P-450EG6) (Fragment) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|35378 : 106.0) no description available & (reliability: 342.0) & (original description: Putative BnaC03g33410D, Description = BnaC03g33410D protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00047661ctg002_1432-4399' '(gnl|cdd|35378 : 215.0) no description available & (at3g61040 : 196.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 76, subfamily C, polypeptide 7" (CYP76C7); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 24977 Blast hits to 24851 proteins in 1464 species: Archae - 37; Bacteria - 1915; Metazoa - 9795; Fungi - 4683; Plants - 7828; Viruses - 0; Other Eukaryotes - 719 (source: NCBI BLink). & (p37122|c76a2_solme : 175.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 120.0) no description available & (reliability: 392.0) & (original description: Putative cpr, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00050838ctg006_420-6290' '(at3g14690 : 602.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 573.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 338.0) no description available & (gnl|cdd|84486 : 249.0) no description available & (reliability: 1204.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben044scf00052783ctg002_586-4968' '(at4g12300 : 459.0) member of CYP706A; "cytochrome P450, family 706, subfamily A, polypeptide 4" (CYP706A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 33926 Blast hits to 33601 proteins in 1707 species: Archae - 58; Bacteria - 3741; Metazoa - 11926; Fungi - 7434; Plants - 9483; Viruses - 3; Other Eukaryotes - 1281 (source: NCBI BLink). & (gnl|cdd|35378 : 430.0) no description available & (gnl|cdd|84486 : 294.0) no description available & (q42798|c93a1_soybn : 290.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 912.0) & (original description: Putative CYP7, Description = Cytochrome P450, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101ctg14561_38-2760' '(at3g56630 : 412.0) member of CYP94D; "cytochrome P450, family 94, subfamily D, polypeptide 2" (CYP94D2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily D, polypeptide 1 (TAIR:AT1G34540.1); Has 28588 Blast hits to 28499 proteins in 1478 species: Archae - 44; Bacteria - 2617; Metazoa - 10641; Fungi - 6172; Plants - 8084; Viruses - 3; Other Eukaryotes - 1027 (source: NCBI BLink). & (gnl|cdd|35379 : 350.0) no description available & (gnl|cdd|84486 : 183.0) no description available & (q05047|c72a1_catro : 98.2) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 824.0) & (original description: Putative CYP94A2, Description = Cytochrome P450 94A2, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf00072_271492-280631' '(gnl|cdd|35378 : 455.0) no description available & (p37117|c71a4_solme : 370.0) Cytochrome P450 71A4 (EC 1.14.-.-) (CYPLXXIA4) (P-450EG2) - Solanum melongena (Eggplant) (Aubergine) & (at4g36220 : 356.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (gnl|cdd|84486 : 293.0) no description available & (reliability: 710.0) & (original description: Putative CYP3, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf00072_538378-542025' '(o81974|c71d8_soybn : 489.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 467.0) no description available & (at3g26310 : 376.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 315.0) no description available & (reliability: 752.0) & (original description: Putative CYP71D20, Description = 5-epiaristolochene 1,3-dihydroxylase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf00072_592796-596443' '(o81974|c71d8_soybn : 489.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 467.0) no description available & (at3g26310 : 376.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 314.0) no description available & (reliability: 752.0) & (original description: Putative CYP71D20, Description = 5-epiaristolochene 1,3-dihydroxylase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf00090_717370-722857' '(at3g19270 : 641.0) Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family.; "cytochrome P450, family 707, subfamily A, polypeptide 4" (CYP707A4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 1 (TAIR:AT4G19230.1); Has 34460 Blast hits to 34219 proteins in 1800 species: Archae - 82; Bacteria - 7577; Metazoa - 11415; Fungi - 5354; Plants - 8009; Viruses - 6; Other Eukaryotes - 2017 (source: NCBI BLink). & (gnl|cdd|35379 : 261.0) no description available & (q9axh9|kao1_horvu : 254.0) Ent-kaurenoic acid oxidase 1 (EC 1.14.13.79) (gpr5) - Hordeum vulgare (Barley) & (gnl|cdd|84486 : 208.0) no description available & (reliability: 1282.0) & (original description: Putative CYP707A4, Description = Abscisic acid 8'-hydroxylase 4, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf00090_717544-721768' '(at3g19270 : 520.0) Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family.; "cytochrome P450, family 707, subfamily A, polypeptide 4" (CYP707A4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 1 (TAIR:AT4G19230.1); Has 34460 Blast hits to 34219 proteins in 1800 species: Archae - 82; Bacteria - 7577; Metazoa - 11415; Fungi - 5354; Plants - 8009; Viruses - 6; Other Eukaryotes - 2017 (source: NCBI BLink). & (gnl|cdd|35379 : 202.0) no description available & (q69f95|c85a_phavu : 196.0) Cytochrome P450 85A (EC 1.14.-.-) (C6-oxidase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|84486 : 163.0) no description available & (reliability: 1040.0) & (original description: Putative CYP707A1, Description = ABA 8'-hydroxylase CYP707A1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf00109_887915-891465' '(at3g01900 : 536.0) member of CYP94B; "cytochrome P450, family 94, subfamily B, polypeptide 2" (CYP94B2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 3 (TAIR:AT3G48520.1); Has 24612 Blast hits to 24535 proteins in 1394 species: Archae - 46; Bacteria - 2681; Metazoa - 9088; Fungi - 5092; Plants - 6664; Viruses - 3; Other Eukaryotes - 1038 (source: NCBI BLink). & (gnl|cdd|35379 : 353.0) no description available & (gnl|cdd|84486 : 195.0) no description available & (q43078|c97b1_pea : 104.0) Cytochrome P450 97B1 (EC 1.14.-.-) (P450 97A2) - Pisum sativum (Garden pea) & (reliability: 1072.0) & (original description: Putative BnaC06g16010D, Description = BnaC06g16010D protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf00113_568768-573471' '(at4g31940 : 458.0) member of CYP82C; "cytochrome P450, family 82, subfamily C, polypeptide 4" (CYP82C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 82, subfamily C, polypeptide 2 (TAIR:AT4G31970.1); Has 33616 Blast hits to 33393 proteins in 1726 species: Archae - 49; Bacteria - 3806; Metazoa - 11816; Fungi - 7242; Plants - 9457; Viruses - 3; Other Eukaryotes - 1243 (source: NCBI BLink). & (o49858|c82a3_soybn : 425.0) Cytochrome P450 82A3 (EC 1.14.-.-) (P450 CP6) - Glycine max (Soybean) & (gnl|cdd|35378 : 392.0) no description available & (gnl|cdd|84486 : 264.0) no description available & (reliability: 916.0) & (original description: Putative CYP82G1, Description = Cytochrome P450 82G1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf00219_418736-425681' '(at4g31940 : 721.0) member of CYP82C; "cytochrome P450, family 82, subfamily C, polypeptide 4" (CYP82C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 82, subfamily C, polypeptide 2 (TAIR:AT4G31970.1); Has 33616 Blast hits to 33393 proteins in 1726 species: Archae - 49; Bacteria - 3806; Metazoa - 11816; Fungi - 7242; Plants - 9457; Viruses - 3; Other Eukaryotes - 1243 (source: NCBI BLink). & (o49858|c82a3_soybn : 523.0) Cytochrome P450 82A3 (EC 1.14.-.-) (P450 CP6) - Glycine max (Soybean) & (gnl|cdd|35378 : 476.0) no description available & (gnl|cdd|84486 : 276.0) no description available & (reliability: 1442.0) & (original description: Putative CYP82, Description = Cytochrome P450 82A4, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf00222_185056-187667' '(at3g25180 : 157.0) member of CYP82G; "cytochrome P450, family 82, subfamily G, polypeptide 1" (CYP82G1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 82, subfamily C, polypeptide 4 (TAIR:AT4G31940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o49858|c82a3_soybn : 145.0) Cytochrome P450 82A3 (EC 1.14.-.-) (P450 CP6) - Glycine max (Soybean) & (gnl|cdd|35378 : 136.0) no description available & (gnl|cdd|84486 : 94.2) no description available & (reliability: 314.0) & (original description: Putative CYP82E1, Description = CYP82M1v1, PFAM = PF00067;PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf00261_292776-299745' '(gnl|cdd|35378 : 443.0) no description available & (at2g45550 : 406.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 4" (CYP76C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 1 (TAIR:AT2G45560.1); Has 35109 Blast hits to 34843 proteins in 1784 species: Archae - 57; Bacteria - 4750; Metazoa - 11986; Fungi - 7467; Plants - 9491; Viruses - 6; Other Eukaryotes - 1352 (source: NCBI BLink). & (p37122|c76a2_solme : 351.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 323.0) no description available & (reliability: 812.0) & (original description: Putative cpr, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf00272_752650-757140' '(at1g69500 : 803.0) Encodes a cytochrome P450, designated CYP704B1. Expressed in the developing anthers. Essential for pollen exine development. Mutations in CYP704B1 result in impaired pollen walls that lack a normal exine layer and exhibit a characteristic striped surface, termed zebra phenotype. Heterologous expression of CYP704B1 in yeast cells demonstrated that it catalyzes omega-hydroxylation of long-chain fatty acids, implicating these molecules in sporopollenin synthesis.; "cytochrome P450, family 704, subfamily B, polypeptide 1" (CYP704B1); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 704, subfamily A, polypeptide 2 (TAIR:AT2G45510.1); Has 24652 Blast hits to 24553 proteins in 1381 species: Archae - 44; Bacteria - 2338; Metazoa - 9085; Fungi - 5048; Plants - 7257; Viruses - 3; Other Eukaryotes - 877 (source: NCBI BLink). & (gnl|cdd|35379 : 372.0) no description available & (gnl|cdd|84486 : 194.0) no description available & (o48921|c97b2_soybn : 104.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1606.0) & (original description: Putative CYP704B1, Description = Cytochrome P450 704B1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf00338_101912-110366' '(at2g23180 : 211.0) member of CYP96A; "cytochrome P450, family 96, subfamily A, polypeptide 1" (CYP96A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 96, subfamily A, polypeptide 9 (TAIR:AT4G39480.1); Has 27906 Blast hits to 27823 proteins in 1447 species: Archae - 44; Bacteria - 2407; Metazoa - 10493; Fungi - 6010; Plants - 7891; Viruses - 3; Other Eukaryotes - 1058 (source: NCBI BLink). & (gnl|cdd|35379 : 143.0) no description available & (gnl|cdd|84486 : 98.8) no description available & (reliability: 422.0) & (original description: Putative In03, Description = Cytochrome P450, PFAM = PF00067;PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf00338_978422-994382' '(at1g73340 : 627.0) Cytochrome P450 superfamily protein; FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT3G50660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35379 : 264.0) no description available & (q94iw5|c90d2_orysa : 243.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|84486 : 177.0) no description available & (reliability: 1254.0) & (original description: Putative CYP720B1, Description = Abietadienol/abietadienal oxidase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf00481_397392-400921' '(at2g23180 : 499.0) member of CYP96A; "cytochrome P450, family 96, subfamily A, polypeptide 1" (CYP96A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 96, subfamily A, polypeptide 9 (TAIR:AT4G39480.1); Has 27906 Blast hits to 27823 proteins in 1447 species: Archae - 44; Bacteria - 2407; Metazoa - 10493; Fungi - 6010; Plants - 7891; Viruses - 3; Other Eukaryotes - 1058 (source: NCBI BLink). & (gnl|cdd|35379 : 333.0) no description available & (gnl|cdd|84486 : 179.0) no description available & (o48921|c97b2_soybn : 103.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 998.0) & (original description: Putative CYP96A15, Description = Alkane hydroxylase MAH1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf00560_487503-491181' '(gnl|cdd|35379 : 309.0) no description available & (at3g48520 : 296.0) member of CYP94B; "cytochrome P450, family 94, subfamily B, polypeptide 3" (CYP94B3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 1 (TAIR:AT5G63450.1); Has 27655 Blast hits to 27536 proteins in 1435 species: Archae - 44; Bacteria - 2616; Metazoa - 10459; Fungi - 5693; Plants - 7745; Viruses - 3; Other Eukaryotes - 1095 (source: NCBI BLink). & (gnl|cdd|84486 : 172.0) no description available & (o48921|c97b2_soybn : 81.6) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 592.0) & (original description: Putative glysoja_002553, Description = Cytochrome P450 94A1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf00560_597587-601607' '(at5g36140 : 116.0) member of CYP716A; "cytochrome P450, family 716, subfamily A, polypeptide 2" (CYP716A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 1 (TAIR:AT5G36110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative PGSC0003DMG400022059, Description = Putative cytochrome P450, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf00592_769531-773566' '(o81974|c71d8_soybn : 532.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 472.0) no description available & (at3g26300 : 399.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 34" (CYP71B34); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 35 (TAIR:AT3G26310.1); Has 33336 Blast hits to 33083 proteins in 1708 species: Archae - 50; Bacteria - 3521; Metazoa - 12043; Fungi - 6985; Plants - 9537; Viruses - 3; Other Eukaryotes - 1197 (source: NCBI BLink). & (gnl|cdd|84486 : 315.0) no description available & (reliability: 798.0) & (original description: Putative CYP71D8, Description = Cytochrome P450 71D8, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf00595_816552-895417' '(at5g52400 : 635.0) member of CYP715A; "cytochrome P450, family 715, subfamily A, polypeptide 1" (CYP715A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 735, subfamily A, polypeptide 1 (TAIR:AT5G38450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35379 : 309.0) no description available & (gnl|cdd|84486 : 253.0) no description available & (q05047|c72a1_catro : 227.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 1270.0) & (original description: Putative cyp, Description = Putative cytochrome P-450, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf00625_165282-167792' '(at1g34540 : 130.0) member of CYP94D; "cytochrome P450, family 94, subfamily D, polypeptide 1" (CYP94D1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily D, polypeptide 2 (TAIR:AT3G56630.1); Has 28664 Blast hits to 28574 proteins in 1494 species: Archae - 44; Bacteria - 2718; Metazoa - 10657; Fungi - 6200; Plants - 7985; Viruses - 3; Other Eukaryotes - 1057 (source: NCBI BLink). & (gnl|cdd|35379 : 87.0) no description available & (reliability: 260.0) & (original description: Putative CYP450A, Description = Cytochrome P450 94A1, PFAM = )' T '26.10' 'misc.cytochrome P450' 'niben101scf00699_3597-11963' '(at3g14690 : 564.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 562.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 339.0) no description available & (gnl|cdd|84486 : 235.0) no description available & (reliability: 1128.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf00699_3603-10622' '(at3g14690 : 493.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 454.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 323.0) no description available & (gnl|cdd|84486 : 234.0) no description available & (reliability: 986.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf00699_13027-19753' '(at3g14690 : 583.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 580.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 345.0) no description available & (gnl|cdd|84486 : 234.0) no description available & (reliability: 1166.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf00741_132336-136546' '(at1g12740 : 745.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 87, subfamily A, polypeptide 2" (CYP87A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 3 (TAIR:AT1G78490.1). & (q7xu38|c87a3_orysa : 647.0) Cytochrome P450 87A3 (EC 1.14.-.-) - Oryza sativa (Rice) & (gnl|cdd|35379 : 298.0) no description available & (gnl|cdd|84486 : 188.0) no description available & (reliability: 1490.0) & (original description: Putative CYP87A3, Description = Cytochrome P450 87A3, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf00922_49304-52888' '(gnl|cdd|35378 : 490.0) no description available & (at4g36220 : 333.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (o81973|c93a3_soybn : 331.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 302.0) no description available & (reliability: 666.0) & (original description: Putative CYP9, Description = Cytochrome P450, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf00996_60123-82891' '(at3g14690 : 416.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 405.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 230.0) no description available & (gnl|cdd|84486 : 166.0) no description available & (reliability: 832.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf00996_60437-76740' '(q05047|c72a1_catro : 120.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g14660 : 100.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 13" (CYP72A13); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 15 (TAIR:AT3G14690.1); Has 31786 Blast hits to 31657 proteins in 1619 species: Archae - 67; Bacteria - 4951; Metazoa - 11303; Fungi - 6022; Plants - 7953; Viruses - 3; Other Eukaryotes - 1487 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf01001_115179-119542' '(o81974|c71d8_soybn : 512.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 473.0) no description available & (at3g26310 : 366.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 303.0) no description available & (reliability: 732.0) & (original description: Putative CYP71D55, Description = Premnaspirodiene oxygenase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf01065_834359-838956' '(gnl|cdd|35378 : 487.0) no description available & (at4g36220 : 322.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (p48418|c75a1_pethy : 321.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 309.0) no description available & (reliability: 614.0) & (original description: Putative CYP9, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf01133_1180037-1184814' '(o48927|c78a3_soybn : 632.0) Cytochrome P450 78A3 (EC 1.14.-.-) - Glycine max (Soybean) & (at2g46660 : 629.0) member of CYP78A; "cytochrome P450, family 78, subfamily A, polypeptide 6" (CYP78A6); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome p450 78a9 (TAIR:AT3G61880.2); Has 32637 Blast hits to 32519 proteins in 1695 species: Archae - 48; Bacteria - 3588; Metazoa - 11617; Fungi - 7095; Plants - 9209; Viruses - 3; Other Eukaryotes - 1077 (source: NCBI BLink). & (gnl|cdd|35378 : 370.0) no description available & (gnl|cdd|84486 : 252.0) no description available & (reliability: 1258.0) & (original description: Putative mnd, Description = Cytochrome P450 78A4, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf01269_217938-221636' '(at5g36110 : 338.0) member of CYP716A; "cytochrome P450, family 716, subfamily A, polypeptide 1" (CYP716A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 2 (TAIR:AT5G36140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 267.0) no description available & (q94iw5|c90d2_orysa : 232.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|84486 : 204.0) no description available & (reliability: 676.0) & (original description: Putative CYP716B2, Description = Cytochrome P450 716B2, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf01276_336438-339763' '(gnl|cdd|35378 : 248.0) no description available & (gnl|cdd|84486 : 199.0) no description available & (at2g45550 : 186.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 4" (CYP76C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 1 (TAIR:AT2G45560.1); Has 35109 Blast hits to 34843 proteins in 1784 species: Archae - 57; Bacteria - 4750; Metazoa - 11986; Fungi - 7467; Plants - 9491; Viruses - 6; Other Eukaryotes - 1352 (source: NCBI BLink). & (q42798|c93a1_soybn : 181.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 372.0) & (original description: Putative CYP9, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf01276_573705-578113' '(gnl|cdd|35378 : 474.0) no description available & (at5g07990 : 364.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (o81973|c93a3_soybn : 354.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 319.0) no description available & (reliability: 724.0) & (original description: Putative f3'h, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf01438_805818-814973' '(q05001|ncpr_catro : 1041.0) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g30210 : 962.0) Encodes NADPH-cytochrome P450 reductase that catalyzes the first oxidative step of the phenylpropanoid general pathway.; P450 reductase 2 (ATR2); FUNCTIONS IN: NADPH-hemoprotein reductase activity; INVOLVED IN: phenylpropanoid metabolic process; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADPH Cytochrome P450 Reductase (InterPro:IPR015702); BEST Arabidopsis thaliana protein match is: P450 reductase 1 (TAIR:AT4G24520.1); Has 6728 Blast hits to 6356 proteins in 1574 species: Archae - 5; Bacteria - 3354; Metazoa - 1038; Fungi - 894; Plants - 570; Viruses - 0; Other Eukaryotes - 867 (source: NCBI BLink). & (gnl|cdd|36373 : 624.0) no description available & (gnl|cdd|30718 : 418.0) no description available & (reliability: 1924.0) & (original description: Putative cpr2, Description = NADPH--cytochrome P450 reductase, PFAM = PF00175;PF00258;PF00667)' T '26.10' 'misc.cytochrome P450' 'niben101scf01442_215841-219322' '(at2g27690 : 589.0) Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment.; "cytochrome P450, family 94, subfamily C, polypeptide 1" (CYP94C1); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 3 (TAIR:AT3G48520.1); Has 28009 Blast hits to 27927 proteins in 1460 species: Archae - 46; Bacteria - 2607; Metazoa - 10748; Fungi - 6059; Plants - 7560; Viruses - 3; Other Eukaryotes - 986 (source: NCBI BLink). & (gnl|cdd|35379 : 324.0) no description available & (gnl|cdd|84486 : 193.0) no description available & (o48921|c97b2_soybn : 103.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1178.0) & (original description: Putative CYP94C1, Description = Cytochrome P450 94C1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf01472_317244-320767' '(at4g39490 : 575.0) member of CYP96A; "cytochrome P450, family 96, subfamily A, polypeptide 10" (CYP96A10); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 96, subfamily A, polypeptide 9 (TAIR:AT4G39480.1); Has 28273 Blast hits to 28182 proteins in 1460 species: Archae - 44; Bacteria - 2431; Metazoa - 10638; Fungi - 6078; Plants - 7933; Viruses - 3; Other Eukaryotes - 1146 (source: NCBI BLink). & (gnl|cdd|35379 : 358.0) no description available & (gnl|cdd|84486 : 189.0) no description available & (q43068|c82a1_pea : 124.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (reliability: 1150.0) & (original description: Putative MAH1, Description = MAH1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf01472_420174-423694' '(at4g39490 : 578.0) member of CYP96A; "cytochrome P450, family 96, subfamily A, polypeptide 10" (CYP96A10); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 96, subfamily A, polypeptide 9 (TAIR:AT4G39480.1); Has 28273 Blast hits to 28182 proteins in 1460 species: Archae - 44; Bacteria - 2431; Metazoa - 10638; Fungi - 6078; Plants - 7933; Viruses - 3; Other Eukaryotes - 1146 (source: NCBI BLink). & (gnl|cdd|35379 : 355.0) no description available & (gnl|cdd|84486 : 175.0) no description available & (o48921|c97b2_soybn : 135.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1156.0) & (original description: Putative CYP96A15, Description = Alkane hydroxylase MAH1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf01538_580685-585243' '(q05047|c72a1_catro : 480.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g14690 : 459.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (gnl|cdd|35379 : 328.0) no description available & (gnl|cdd|84486 : 249.0) no description available & (reliability: 918.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf01559_348532-358967' '(o48921|c97b2_soybn : 889.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (at4g15110 : 836.0) member of CYP97B; "cytochrome P450, family 97, subfamily B, polypeptide 3" (CYP97B3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 97, subfamily A, polypeptide 3 (TAIR:AT1G31800.1); Has 31568 Blast hits to 31460 proteins in 1570 species: Archae - 46; Bacteria - 3266; Metazoa - 11509; Fungi - 6986; Plants - 8573; Viruses - 6; Other Eukaryotes - 1182 (source: NCBI BLink). & (gnl|cdd|35379 : 303.0) no description available & (gnl|cdd|84486 : 246.0) no description available & (reliability: 1672.0) & (original description: Putative cpr, Description = Cytochrome P450 97B2, chloroplastic, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf01569_478585-494438' '(at4g31940 : 469.0) member of CYP82C; "cytochrome P450, family 82, subfamily C, polypeptide 4" (CYP82C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 82, subfamily C, polypeptide 2 (TAIR:AT4G31970.1); Has 33616 Blast hits to 33393 proteins in 1726 species: Archae - 49; Bacteria - 3806; Metazoa - 11816; Fungi - 7242; Plants - 9457; Viruses - 3; Other Eukaryotes - 1243 (source: NCBI BLink). & (o49858|c82a3_soybn : 462.0) Cytochrome P450 82A3 (EC 1.14.-.-) (P450 CP6) - Glycine max (Soybean) & (gnl|cdd|35378 : 436.0) no description available & (gnl|cdd|84486 : 286.0) no description available & (reliability: 938.0) & (original description: Putative CYP82C4, Description = Cytochrome P450 82C4, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf01664_564493-569250' '(at1g12740 : 522.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 87, subfamily A, polypeptide 2" (CYP87A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 3 (TAIR:AT1G78490.1). & (q7xu38|c87a3_orysa : 509.0) Cytochrome P450 87A3 (EC 1.14.-.-) - Oryza sativa (Rice) & (gnl|cdd|35379 : 288.0) no description available & (gnl|cdd|84486 : 173.0) no description available & (reliability: 1044.0) & (original description: Putative CYP87A3, Description = Cytochrome P450 87A3, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf01716_82062-85666' '(at2g45970 : 884.0) Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed at moderate levels in flowers, leaves, roots and stems.; "cytochrome P450, family 86, subfamily A, polypeptide 8" (CYP86A8); FUNCTIONS IN: alkane 1-monooxygenase activity, oxygen binding; INVOLVED IN: fatty acid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 86, subfamily A, polypeptide 4 (TAIR:AT1G01600.1); Has 27979 Blast hits to 27896 proteins in 1493 species: Archae - 44; Bacteria - 2538; Metazoa - 10315; Fungi - 6189; Plants - 7925; Viruses - 3; Other Eukaryotes - 965 (source: NCBI BLink). & (gnl|cdd|35379 : 409.0) no description available & (gnl|cdd|84486 : 202.0) no description available & (q9sbq9|f3ph_pethy : 113.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (reliability: 1768.0) & (original description: Putative CYP86A22, Description = Cytochrome P450 86A22, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf01732_99312-103516' '(gnl|cdd|35378 : 441.0) no description available & (at4g12320 : 419.0) member of CYP706A; "cytochrome P450, family 706, subfamily A, polypeptide 6" (CYP706A6); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 4 (TAIR:AT4G12300.1); Has 33870 Blast hits to 33549 proteins in 1704 species: Archae - 58; Bacteria - 3712; Metazoa - 11941; Fungi - 7375; Plants - 9569; Viruses - 3; Other Eukaryotes - 1212 (source: NCBI BLink). & (gnl|cdd|84486 : 307.0) no description available & (q42798|c93a1_soybn : 266.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 838.0) & (original description: Putative CYP1, Description = Flavonoid 3'-monooxygenase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf01732_207515-211624' '(gnl|cdd|35378 : 445.0) no description available & (at4g12300 : 443.0) member of CYP706A; "cytochrome P450, family 706, subfamily A, polypeptide 4" (CYP706A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 33926 Blast hits to 33601 proteins in 1707 species: Archae - 58; Bacteria - 3741; Metazoa - 11926; Fungi - 7434; Plants - 9483; Viruses - 3; Other Eukaryotes - 1281 (source: NCBI BLink). & (gnl|cdd|84486 : 309.0) no description available & (o81973|c93a3_soybn : 296.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (reliability: 874.0) & (original description: Putative f3'5'h, Description = Flavonoid 3',5'-hydroxylase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf01732_211221-217167' '(at4g12300 : 460.0) member of CYP706A; "cytochrome P450, family 706, subfamily A, polypeptide 4" (CYP706A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 33926 Blast hits to 33601 proteins in 1707 species: Archae - 58; Bacteria - 3741; Metazoa - 11926; Fungi - 7434; Plants - 9483; Viruses - 3; Other Eukaryotes - 1281 (source: NCBI BLink). & (gnl|cdd|35378 : 441.0) no description available & (q42798|c93a1_soybn : 306.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|84486 : 298.0) no description available & (reliability: 916.0) & (original description: Putative CYP1, Description = Cytochrome P450, putative, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf01732_220591-224985' '(at4g12300 : 607.0) member of CYP706A; "cytochrome P450, family 706, subfamily A, polypeptide 4" (CYP706A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 33926 Blast hits to 33601 proteins in 1707 species: Archae - 58; Bacteria - 3741; Metazoa - 11926; Fungi - 7434; Plants - 9483; Viruses - 3; Other Eukaryotes - 1281 (source: NCBI BLink). & (gnl|cdd|35378 : 473.0) no description available & (o81973|c93a3_soybn : 332.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (gnl|cdd|84486 : 305.0) no description available & (reliability: 1186.0) & (original description: Putative CYP7, Description = Cytochrome P450, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf01813_145590-149660' '(gnl|cdd|35378 : 494.0) no description available & (o81970|c71a9_soybn : 395.0) Cytochrome P450 71A9 (EC 1.14.-.-) (P450 CP1) - Glycine max (Soybean) & (at3g26310 : 347.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 326.0) no description available & (reliability: 694.0) & (original description: Putative CYP10, Description = Cytochrome P450, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf01813_145620-149681' '(gnl|cdd|35378 : 494.0) no description available & (o81970|c71a9_soybn : 395.0) Cytochrome P450 71A9 (EC 1.14.-.-) (P450 CP1) - Glycine max (Soybean) & (at3g26310 : 347.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 325.0) no description available & (reliability: 694.0) & (original description: Putative CYP10, Description = Cytochrome P450, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf01859_412992-418709' '(at1g75130 : 530.0) member of CYP721A; "cytochrome P450, family 721, subfamily A, polypeptide 1" (CYP721A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT2G26710.1); Has 31101 Blast hits to 31007 proteins in 1591 species: Archae - 75; Bacteria - 4273; Metazoa - 11060; Fungi - 6215; Plants - 8065; Viruses - 3; Other Eukaryotes - 1410 (source: NCBI BLink). & (q05047|c72a1_catro : 350.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 318.0) no description available & (gnl|cdd|84486 : 231.0) no description available & (reliability: 1060.0) & (original description: Putative CYP734A1, Description = Cytochrome P450 734A1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf01991_652749-657822' '(at5g38450 : 717.0) member of CYP709A; "cytochrome P450, family 735, subfamily A, polypeptide 1" (CYP735A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, root, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 735, subfamily A, polypeptide 2 (TAIR:AT1G67110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 354.0) no description available & (q05047|c72a1_catro : 329.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|84486 : 237.0) no description available & (reliability: 1434.0) & (original description: Putative CYP735A1, Description = Cytokinin hydroxylase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf02195_477937-483034' '(at2g45570 : 441.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 2" (CYP76C2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, sepal, male gametophyte, carpel, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 34313 Blast hits to 34043 proteins in 1718 species: Archae - 48; Bacteria - 4021; Metazoa - 12101; Fungi - 7308; Plants - 9587; Viruses - 3; Other Eukaryotes - 1245 (source: NCBI BLink). & (gnl|cdd|35378 : 432.0) no description available & (p37122|c76a2_solme : 340.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 296.0) no description available & (reliability: 882.0) & (original description: Putative cpr, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf02207_1111318-1116008' '(at4g15440 : 436.0) Encodes a hydroperoxide lyase. Also a member of the CYP74B cytochrome p450 family. In the ecotype Columbia (Col) the gene contains a 10-nucleotide deletion in its first exon that causes it to code for a truncated protein that results in a non-functional hydroperoxide lyase.; hydroperoxide lyase 1 (HPL1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; INVOLVED IN: fatty acid metabolic process, response to wounding; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403); BEST Arabidopsis thaliana protein match is: allene oxide synthase (TAIR:AT5G42650.1); Has 6712 Blast hits to 6702 proteins in 615 species: Archae - 25; Bacteria - 392; Metazoa - 3265; Fungi - 548; Plants - 2246; Viruses - 0; Other Eukaryotes - 236 (source: NCBI BLink). & (q6z6k9|c74a4_orysa : 320.0) Cytochrome P450 74A4 (EC 4.2.1.92) (Allene oxide synthase 4) (Hydroperoxide dehydrase 4) - Oryza sativa (Rice) & (gnl|cdd|35379 : 100.0) no description available & (gnl|cdd|84486 : 98.0) no description available & (reliability: 872.0) & (original description: Putative hpl, Description = Hydroperoxide lyase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf02232_16644-20161' '(at2g34500 : 641.0) Encodes a protein with C22-sterol desaturase activity. The enzyme was shown to catalyze in the presence of NADPH the conversion of β-sitosterol to stigmasterol, but not that of 24-epi-campesterol to brassicasterol (unlike CYP710A2).; cytochrome P450, family 710, subfamily A, polypeptide 1 (CYP710A1); FUNCTIONS IN: C-22 sterol desaturase activity, oxygen binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 710, subfamily A, polypeptide 2 (TAIR:AT2G34490.1); Has 25674 Blast hits to 25623 proteins in 1435 species: Archae - 46; Bacteria - 2777; Metazoa - 10394; Fungi - 4411; Plants - 7239; Viruses - 0; Other Eukaryotes - 807 (source: NCBI BLink). & (gnl|cdd|35379 : 229.0) no description available & (gnl|cdd|84486 : 160.0) no description available & (q43246|c88a1_maize : 92.4) Cytochrome P450 88A1 (EC 1.14.-.-) (Dwarf3 protein) - Zea mays (Maize) & (reliability: 1282.0) & (original description: Putative CYP710A11, Description = Cytochrome P450 710A11, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf02250_324783-328918' '(at5g58860 : 825.0) Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed significantly only in root tissue.; "cytochrome P450, family 86, subfamily A, polypeptide 1" (CYP86A1); FUNCTIONS IN: alkane 1-monooxygenase activity, oxygen binding; INVOLVED IN: fatty acid metabolic process, suberin biosynthetic process; LOCATED IN: vacuole; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 86, subfamily A, polypeptide 2 (TAIR:AT4G00360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 370.0) no description available & (gnl|cdd|84486 : 210.0) no description available & (q43255|c71c2_maize : 105.0) Cytochrome P450 71C2 (EC 1.14.-.-) (Benzoxazineless 3) - Zea mays (Maize) & (reliability: 1650.0) & (original description: Putative CYP86A1, Description = Cytochrome P450 86A1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf02316_459842-467286' '(at5g24910 : 471.0) member of CYP714A; "cytochrome P450, family 714, subfamily A, polypeptide 1" (CYP714A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 714, subfamily A, polypeptide 2 (TAIR:AT5G24900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35379 : 306.0) no description available & (q05047|c72a1_catro : 256.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|84486 : 239.0) no description available & (reliability: 942.0) & (original description: Putative CYP714C2, Description = Cytochrome P450 714C2, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf02322_344527-356847' '(o49859|c82a4_soybn : 103.0) Cytochrome P450 82A4 (EC 1.14.-.-) (P450 CP9) - Glycine max (Soybean) & (gnl|cdd|35378 : 101.0) no description available & (at4g31950 : 90.1) member of CYP82C; "cytochrome P450, family 82, subfamily C, polypeptide 3" (CYP82C3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 82, subfamily C, polypeptide 4 (TAIR:AT4G31940.1); Has 32928 Blast hits to 32766 proteins in 1729 species: Archae - 58; Bacteria - 3784; Metazoa - 11595; Fungi - 6894; Plants - 9333; Viruses - 3; Other Eukaryotes - 1261 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative CYP82A3, Description = Cytochrome P450 82A3, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf02322_352845-357462' '(o49859|c82a4_soybn : 491.0) Cytochrome P450 82A4 (EC 1.14.-.-) (P450 CP9) - Glycine max (Soybean) & (at4g31940 : 456.0) member of CYP82C; "cytochrome P450, family 82, subfamily C, polypeptide 4" (CYP82C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 82, subfamily C, polypeptide 2 (TAIR:AT4G31970.1); Has 33616 Blast hits to 33393 proteins in 1726 species: Archae - 49; Bacteria - 3806; Metazoa - 11816; Fungi - 7242; Plants - 9457; Viruses - 3; Other Eukaryotes - 1243 (source: NCBI BLink). & (gnl|cdd|35378 : 453.0) no description available & (gnl|cdd|84486 : 301.0) no description available & (reliability: 912.0) & (original description: Putative CYP82A4, Description = Cytochrome P450 82A4, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf02408_150490-156314' '(at3g19270 : 660.0) Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family.; "cytochrome P450, family 707, subfamily A, polypeptide 4" (CYP707A4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 1 (TAIR:AT4G19230.1); Has 34460 Blast hits to 34219 proteins in 1800 species: Archae - 82; Bacteria - 7577; Metazoa - 11415; Fungi - 5354; Plants - 8009; Viruses - 6; Other Eukaryotes - 2017 (source: NCBI BLink). & (gnl|cdd|35379 : 281.0) no description available & (q69f95|c85a_phavu : 233.0) Cytochrome P450 85A (EC 1.14.-.-) (C6-oxidase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|84486 : 213.0) no description available & (reliability: 1320.0) & (original description: Putative CYP707A4, Description = Abscisic acid 8'-hydroxylase 4, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf02427_28989-32949' '(at4g37370 : 469.0) member of CYP81D; "cytochrome P450, family 81, subfamily D, polypeptide 8" (CYP81D8); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to karrikin; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 3 (TAIR:AT4G37340.1); Has 35915 Blast hits to 35767 proteins in 1837 species: Archae - 61; Bacteria - 5629; Metazoa - 11821; Fungi - 7460; Plants - 9456; Viruses - 3; Other Eukaryotes - 1485 (source: NCBI BLink). & (gnl|cdd|35378 : 468.0) no description available & (gnl|cdd|84486 : 304.0) no description available & (q43068|c82a1_pea : 303.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (reliability: 938.0) & (original description: Putative CYP81E1, Description = Isoflavone 2'-hydroxylase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf02576_131110-135162' '(at4g00360 : 814.0) Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed at moderate levels in flowers, leaves, roots and stems.; "cytochrome P450, family 86, subfamily A, polypeptide 2" (CYP86A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 86, subfamily A, polypeptide 4 (TAIR:AT1G01600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 402.0) no description available & (gnl|cdd|84486 : 198.0) no description available & (q42798|c93a1_soybn : 105.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1628.0) & (original description: Putative CYP86A22, Description = Cytochrome P450 86A22, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf02625_30454-108755' '(at3g48520 : 570.0) member of CYP94B; "cytochrome P450, family 94, subfamily B, polypeptide 3" (CYP94B3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 1 (TAIR:AT5G63450.1); Has 27655 Blast hits to 27536 proteins in 1435 species: Archae - 44; Bacteria - 2616; Metazoa - 10459; Fungi - 5693; Plants - 7745; Viruses - 3; Other Eukaryotes - 1095 (source: NCBI BLink). & (gnl|cdd|35379 : 379.0) no description available & (gnl|cdd|84486 : 198.0) no description available & (o48921|c97b2_soybn : 97.1) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1140.0) & (original description: Putative CYP94B3, Description = Cytochrome P450 94B3, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf02814_292054-296391' '(p37122|c76a2_solme : 682.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (at3g52970 : 434.0) member of CYP76G; "cytochrome P450, family 76, subfamily G, polypeptide 1" (CYP76G1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1). & (gnl|cdd|35378 : 426.0) no description available & (gnl|cdd|84486 : 332.0) no description available & (reliability: 868.0) & (original description: Putative gfh2, Description = Cytochrome P450 76A2, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf03193_18703-23405' '(o81974|c71d8_soybn : 503.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 460.0) no description available & (at3g26300 : 363.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 34" (CYP71B34); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 35 (TAIR:AT3G26310.1); Has 33336 Blast hits to 33083 proteins in 1708 species: Archae - 50; Bacteria - 3521; Metazoa - 12043; Fungi - 6985; Plants - 9537; Viruses - 3; Other Eukaryotes - 1197 (source: NCBI BLink). & (gnl|cdd|84486 : 296.0) no description available & (reliability: 726.0) & (original description: Putative CYP71D55, Description = Premnaspirodiene oxygenase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf03249_135023-141094' '(at5g36110 : 365.0) member of CYP716A; "cytochrome P450, family 716, subfamily A, polypeptide 1" (CYP716A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 2 (TAIR:AT5G36140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 233.0) no description available & (q94iw5|c90d2_orysa : 171.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|84486 : 169.0) no description available & (reliability: 730.0) & (original description: Putative ATH1, Description = Cytochrome P450, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf03262_145967-150912' '(p37121|c76a1_solme : 712.0) Cytochrome P450 76A1 (EC 1.14.-.-) (CYPLXXVIA1) (P-450EG8) (Fragment) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|35378 : 432.0) no description available & (at3g52970 : 394.0) member of CYP76G; "cytochrome P450, family 76, subfamily G, polypeptide 1" (CYP76G1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1). & (gnl|cdd|84486 : 348.0) no description available & (reliability: 788.0) & (original description: Putative cpr, Description = Cytochrome P450 76A2, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf03320_527044-531744' '(q42798|c93a1_soybn : 582.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|35378 : 510.0) no description available & (at5g06900 : 451.0) member of CYP93D; "cytochrome P450, family 93, subfamily D, polypeptide 1" (CYP93D1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 712, subfamily A, polypeptide 1 (TAIR:AT2G42250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84486 : 319.0) no description available & (reliability: 902.0) & (original description: Putative CYP93A1, Description = 3,9-dihydroxypterocarpan 6A-monooxygenase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf03396_289943-295424' '(at5g36110 : 405.0) member of CYP716A; "cytochrome P450, family 716, subfamily A, polypeptide 1" (CYP716A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 2 (TAIR:AT5G36140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 285.0) no description available & (q7xu38|c87a3_orysa : 202.0) Cytochrome P450 87A3 (EC 1.14.-.-) - Oryza sativa (Rice) & (gnl|cdd|84486 : 190.0) no description available & (reliability: 810.0) & (original description: Putative CYP725A2, Description = Taxane 13-alpha-hydroxylase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf03403_153766-163180' '(p37116|ncpr_phaau : 389.0) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Phaseolus aureus (Mung bean) (Vigna radiata) & (at4g24520 : 323.0) Encodes a cyp450 reductase likely to be involved in phenylpropanoid metabolism.; P450 reductase 1 (ATR1); CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADPH Cytochrome P450 Reductase (InterPro:IPR015702); BEST Arabidopsis thaliana protein match is: P450 reductase 2 (TAIR:AT4G30210.2). & (gnl|cdd|36373 : 185.0) no description available & (gnl|cdd|30718 : 147.0) no description available & (reliability: 646.0) & (original description: Putative CPR, Description = NADPH-cytochrome P450 reductase, PFAM = PF00258)' T '26.10' 'misc.cytochrome P450' 'niben101scf03435_192875-202266' '(at1g12740 : 408.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 87, subfamily A, polypeptide 2" (CYP87A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 3 (TAIR:AT1G78490.1). & (q7xu38|c87a3_orysa : 400.0) Cytochrome P450 87A3 (EC 1.14.-.-) - Oryza sativa (Rice) & (gnl|cdd|35379 : 228.0) no description available & (gnl|cdd|84486 : 142.0) no description available & (reliability: 816.0) & (original description: Putative CYP87A3, Description = Cytochrome P450 87A3, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf03435_193638-202152' '(at1g12740 : 270.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 87, subfamily A, polypeptide 2" (CYP87A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 3 (TAIR:AT1G78490.1). & (q7xu38|c87a3_orysa : 186.0) Cytochrome P450 87A3 (EC 1.14.-.-) - Oryza sativa (Rice) & (gnl|cdd|35379 : 142.0) no description available & (gnl|cdd|84486 : 126.0) no description available & (reliability: 540.0) & (original description: Putative Csa1G044890, Description = Cytochrome P450 87A3, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf03595_843915-850629' '(at5g23190 : 778.0) cytochrome P450 CYP86B1, nuclear gene for chloroplast product. CYP86B1 is a very long chain fatty acid hydroxylase specifically involved in polyester monomer biosynthesis during the course of plant development.; "cytochrome P450, family 86, subfamily B, polypeptide 1" (CYP86B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: very long-chain fatty acid biosynthetic process, suberin biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G08250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 394.0) no description available & (gnl|cdd|84486 : 202.0) no description available & (o48921|c97b2_soybn : 125.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1556.0) & (original description: Putative CYP86B1, Description = Cytochrome P450 86B1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf03647_87273-91470' '(at3g56630 : 609.0) member of CYP94D; "cytochrome P450, family 94, subfamily D, polypeptide 2" (CYP94D2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily D, polypeptide 1 (TAIR:AT1G34540.1); Has 28588 Blast hits to 28499 proteins in 1478 species: Archae - 44; Bacteria - 2617; Metazoa - 10641; Fungi - 6172; Plants - 8084; Viruses - 3; Other Eukaryotes - 1027 (source: NCBI BLink). & (gnl|cdd|35379 : 367.0) no description available & (gnl|cdd|84486 : 189.0) no description available & (o48921|c97b2_soybn : 117.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1218.0) & (original description: Putative CYP94A2, Description = Cytochrome P450 94A2, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf03659_320467-394348' '(q43135|c79a1_sorbi : 161.0) Cytochrome P450 79A1 (EC 1.14.13.41) (Tyrosine N-monooxygenase) (Cytochrome P450Tyr) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (at4g39950 : 157.0) Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates.; "cytochrome P450, family 79, subfamily B, polypeptide 2" (CYP79B2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: in 8 processes; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily B, polypeptide 3 (TAIR:AT2G22330.1); Has 28507 Blast hits to 28366 proteins in 1550 species: Archae - 44; Bacteria - 2565; Metazoa - 10705; Fungi - 5395; Plants - 8898; Viruses - 0; Other Eukaryotes - 900 (source: NCBI BLink). & (gnl|cdd|35378 : 106.0) no description available & (gnl|cdd|84486 : 96.9) no description available & (reliability: 314.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf03659_325845-331148' '(at5g05260 : 495.0) Encodes cytochrome P450 CYP79A2.; cytochrome p450 79a2 (CYP79A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene (TAIR:AT5G35917.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o81345|c79b1_sinal : 477.0) Cytochrome P450 79B1 (EC 1.14.-.-) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|35378 : 344.0) no description available & (gnl|cdd|84486 : 225.0) no description available & (reliability: 990.0) & (original description: Putative CYP79D4, Description = Isoleucine N-monooxygenase 2, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf03674_199197-202699' '(at2g27690 : 593.0) Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment.; "cytochrome P450, family 94, subfamily C, polypeptide 1" (CYP94C1); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 3 (TAIR:AT3G48520.1); Has 28009 Blast hits to 27927 proteins in 1460 species: Archae - 46; Bacteria - 2607; Metazoa - 10748; Fungi - 6059; Plants - 7560; Viruses - 3; Other Eukaryotes - 986 (source: NCBI BLink). & (gnl|cdd|35379 : 318.0) no description available & (gnl|cdd|84486 : 175.0) no description available & (q43068|c82a1_pea : 98.6) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (reliability: 1186.0) & (original description: Putative CYP94C1, Description = Cytochrome P450 94C1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf03758_177507-188516' '(at1g19630 : 529.0) member of CYP722A; "cytochrome P450, family 722, subfamily A, polypeptide 1" (CYP722A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 1 (TAIR:AT4G19230.1); Has 35375 Blast hits to 35292 proteins in 1804 species: Archae - 63; Bacteria - 6821; Metazoa - 11890; Fungi - 5888; Plants - 8751; Viruses - 3; Other Eukaryotes - 1959 (source: NCBI BLink). & (gnl|cdd|35379 : 258.0) no description available & (gnl|cdd|84486 : 216.0) no description available & (q94iw5|c90d2_orysa : 200.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (reliability: 1058.0) & (original description: Putative CYP722A1, Description = Cytochrome P450, family 722, subfamily A, polypeptide 1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf03761_43413-48596' '(at1g01280 : 784.0) member of CYP703A CYP703A2 is expressed specifically in anthers of land plants, catalyzing the in-chain hydroxylation at the C-7 position of medium-chain saturated fatty acids (lauric acid in-chain hydroxylase) which is involved in pollen development (sporopollenin synthesis).; "cytochrome P450, family 703, subfamily A, polypeptide 2" (CYP703A2); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, oxygen binding; INVOLVED IN: medium-chain fatty acid metabolic process, pollen wall assembly, medium-chain fatty acid biosynthetic process, sporopollenin biosynthetic process, pollen exine formation; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G07990.1); Has 29652 Blast hits to 29399 proteins in 1569 species: Archae - 44; Bacteria - 2451; Metazoa - 11172; Fungi - 6019; Plants - 9091; Viruses - 3; Other Eukaryotes - 872 (source: NCBI BLink). & (gnl|cdd|35378 : 464.0) no description available & (q9sbq9|f3ph_pethy : 357.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 301.0) no description available & (reliability: 1568.0) & (original description: Putative CYP703A2, Description = Cytochrome P450 703A2, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf04011_433992-437985' '(gnl|cdd|35378 : 483.0) no description available & (at4g36220 : 374.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (q9sbq9|f3ph_pethy : 344.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 311.0) no description available & (reliability: 700.0) & (original description: Putative f5h, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf04134_38862-42403' '(at5g63450 : 293.0) member of CYP94B; "cytochrome P450, family 94, subfamily B, polypeptide 1" (CYP94B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 3 (TAIR:AT3G48520.1); Has 25811 Blast hits to 25731 proteins in 1391 species: Archae - 44; Bacteria - 2296; Metazoa - 9758; Fungi - 5338; Plants - 7375; Viruses - 3; Other Eukaryotes - 997 (source: NCBI BLink). & (gnl|cdd|35379 : 293.0) no description available & (gnl|cdd|84486 : 171.0) no description available & (o49858|c82a3_soybn : 92.8) Cytochrome P450 82A3 (EC 1.14.-.-) (P450 CP6) - Glycine max (Soybean) & (reliability: 586.0) & (original description: Putative CYP94A1, Description = Cytochrome P450 94A1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf04138_198521-214654' '(at5g24910 : 633.0) member of CYP714A; "cytochrome P450, family 714, subfamily A, polypeptide 1" (CYP714A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 714, subfamily A, polypeptide 2 (TAIR:AT5G24900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35379 : 332.0) no description available & (q05047|c72a1_catro : 271.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|84486 : 242.0) no description available & (reliability: 1266.0) & (original description: Putative CYP714A1, Description = Cytochrome P450 714A1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf04260_221180-226435' '(p37122|c76a2_solme : 541.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|35378 : 410.0) no description available & (at3g52970 : 395.0) member of CYP76G; "cytochrome P450, family 76, subfamily G, polypeptide 1" (CYP76G1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1). & (gnl|cdd|84486 : 328.0) no description available & (reliability: 790.0) & (original description: Putative CS, Description = Corytuberine synthase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf04362_791013-794670' '(o81974|c71d8_soybn : 499.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 467.0) no description available & (at3g26300 : 385.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 34" (CYP71B34); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 35 (TAIR:AT3G26310.1); Has 33336 Blast hits to 33083 proteins in 1708 species: Archae - 50; Bacteria - 3521; Metazoa - 12043; Fungi - 6985; Plants - 9537; Viruses - 3; Other Eukaryotes - 1197 (source: NCBI BLink). & (gnl|cdd|84486 : 308.0) no description available & (reliability: 770.0) & (original description: Putative CYP71D20, Description = 5-epiaristolochene 1,3-dihydroxylase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf04500_350923-424684' '(at4g39490 : 509.0) member of CYP96A; "cytochrome P450, family 96, subfamily A, polypeptide 10" (CYP96A10); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 96, subfamily A, polypeptide 9 (TAIR:AT4G39480.1); Has 28273 Blast hits to 28182 proteins in 1460 species: Archae - 44; Bacteria - 2431; Metazoa - 10638; Fungi - 6078; Plants - 7933; Viruses - 3; Other Eukaryotes - 1146 (source: NCBI BLink). & (gnl|cdd|35379 : 323.0) no description available & (gnl|cdd|84486 : 161.0) no description available & (q43068|c82a1_pea : 119.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (reliability: 1018.0) & (original description: Putative In03, Description = Cytochrome P450 family protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf04500_396469-424693' '(at4g39490 : 506.0) member of CYP96A; "cytochrome P450, family 96, subfamily A, polypeptide 10" (CYP96A10); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 96, subfamily A, polypeptide 9 (TAIR:AT4G39480.1); Has 28273 Blast hits to 28182 proteins in 1460 species: Archae - 44; Bacteria - 2431; Metazoa - 10638; Fungi - 6078; Plants - 7933; Viruses - 3; Other Eukaryotes - 1146 (source: NCBI BLink). & (gnl|cdd|35379 : 326.0) no description available & (gnl|cdd|84486 : 165.0) no description available & (o48921|c97b2_soybn : 102.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1012.0) & (original description: Putative In03, Description = Cytochrome P450 family protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf04500_479441-482955' '(at4g39490 : 584.0) member of CYP96A; "cytochrome P450, family 96, subfamily A, polypeptide 10" (CYP96A10); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 96, subfamily A, polypeptide 9 (TAIR:AT4G39480.1); Has 28273 Blast hits to 28182 proteins in 1460 species: Archae - 44; Bacteria - 2431; Metazoa - 10638; Fungi - 6078; Plants - 7933; Viruses - 3; Other Eukaryotes - 1146 (source: NCBI BLink). & (gnl|cdd|35379 : 352.0) no description available & (gnl|cdd|84486 : 182.0) no description available & (o48921|c97b2_soybn : 135.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1168.0) & (original description: Putative CYP96A15, Description = Alkane hydroxylase MAH1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf04702_599890-603580' '(o81974|c71d8_soybn : 467.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 457.0) no description available & (at3g26330 : 367.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 37" (CYP71B37); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 36 (TAIR:AT3G26320.1); Has 32471 Blast hits to 32207 proteins in 1677 species: Archae - 50; Bacteria - 3065; Metazoa - 12022; Fungi - 6765; Plants - 9535; Viruses - 3; Other Eukaryotes - 1031 (source: NCBI BLink). & (gnl|cdd|84486 : 307.0) no description available & (reliability: 734.0) & (original description: Putative cyp71, Description = Cytochrome P450, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf04887_113738-118444' '(gnl|cdd|35378 : 443.0) no description available & (at2g45570 : 419.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 2" (CYP76C2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, sepal, male gametophyte, carpel, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 34313 Blast hits to 34043 proteins in 1718 species: Archae - 48; Bacteria - 4021; Metazoa - 12101; Fungi - 7308; Plants - 9587; Viruses - 3; Other Eukaryotes - 1245 (source: NCBI BLink). & (p37122|c76a2_solme : 328.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 302.0) no description available & (reliability: 838.0) & (original description: Putative cpr, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf04930_38889-42421' '(at5g63450 : 402.0) member of CYP94B; "cytochrome P450, family 94, subfamily B, polypeptide 1" (CYP94B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 3 (TAIR:AT3G48520.1); Has 25811 Blast hits to 25731 proteins in 1391 species: Archae - 44; Bacteria - 2296; Metazoa - 9758; Fungi - 5338; Plants - 7375; Viruses - 3; Other Eukaryotes - 997 (source: NCBI BLink). & (gnl|cdd|35379 : 345.0) no description available & (gnl|cdd|84486 : 181.0) no description available & (q05047|c72a1_catro : 95.1) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 804.0) & (original description: Putative CYP94A1, Description = Cytochrome P450 94A1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf04945_315191-322883' '(at3g14690 : 571.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 557.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 339.0) no description available & (gnl|cdd|84486 : 217.0) no description available & (reliability: 1142.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf04995_1183312-1187744' '(gnl|cdd|35378 : 433.0) no description available & (at4g37320 : 423.0) member of CYP81D; "cytochrome P450, family 81, subfamily D, polypeptide 5" (CYP81D5); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 4 (TAIR:AT4G37330.1); Has 34217 Blast hits to 34042 proteins in 1758 species: Archae - 61; Bacteria - 4626; Metazoa - 11716; Fungi - 7014; Plants - 9489; Viruses - 3; Other Eukaryotes - 1308 (source: NCBI BLink). & (gnl|cdd|84486 : 281.0) no description available & (q43068|c82a1_pea : 280.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (reliability: 846.0) & (original description: Putative CYP81E1, Description = Isoflavone 2'-hydroxylase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf05034_98139-101793' '(gnl|cdd|35378 : 394.0) no description available & (at2g45570 : 325.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 2" (CYP76C2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, sepal, male gametophyte, carpel, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 34313 Blast hits to 34043 proteins in 1718 species: Archae - 48; Bacteria - 4021; Metazoa - 12101; Fungi - 7308; Plants - 9587; Viruses - 3; Other Eukaryotes - 1245 (source: NCBI BLink). & (gnl|cdd|84486 : 282.0) no description available & (p37122|c76a2_solme : 269.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (reliability: 650.0) & (original description: Putative CYP80F1, Description = Littorine mutase/monooxygenase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf05111_393144-397662' '(at5g09970 : 692.0) member of CYP78A; "cytochrome P450, family 78, subfamily A, polypeptide 7" (CYP78A7); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: regulation of meristem growth; EXPRESSED IN: embryo, leaf primordium, shoot lateral meristem, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 78, subfamily A, polypeptide 6 (TAIR:AT2G46660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p48420|c78a1_maize : 625.0) Cytochrome P450 78A1 (EC 1.14.-.-) (CYPLXXVIII) - Zea mays (Maize) & (gnl|cdd|35378 : 408.0) no description available & (gnl|cdd|84486 : 246.0) no description available & (reliability: 1384.0) & (original description: Putative CYP78A7, Description = Cytochrome P450 78A7, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf05191_36517-46617' '(o48921|c97b2_soybn : 807.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (at4g15110 : 756.0) member of CYP97B; "cytochrome P450, family 97, subfamily B, polypeptide 3" (CYP97B3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 97, subfamily A, polypeptide 3 (TAIR:AT1G31800.1); Has 31568 Blast hits to 31460 proteins in 1570 species: Archae - 46; Bacteria - 3266; Metazoa - 11509; Fungi - 6986; Plants - 8573; Viruses - 6; Other Eukaryotes - 1182 (source: NCBI BLink). & (gnl|cdd|35379 : 273.0) no description available & (gnl|cdd|84486 : 228.0) no description available & (reliability: 1512.0) & (original description: Putative cpr, Description = Cytochrome P450 97B2, chloroplastic, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf05492_304448-307208' '(gnl|cdd|35378 : 155.0) no description available & (at3g26330 : 107.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 37" (CYP71B37); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 36 (TAIR:AT3G26320.1); Has 32471 Blast hits to 32207 proteins in 1677 species: Archae - 50; Bacteria - 3065; Metazoa - 12022; Fungi - 6765; Plants - 9535; Viruses - 3; Other Eukaryotes - 1031 (source: NCBI BLink). & (o22307|c71db_lotja : 93.6) Cytochrome P450 71D11 (EC 1.14.-.-) (Fragment) - Lotus japonicus & (gnl|cdd|84486 : 84.2) no description available & (reliability: 214.0) & (original description: Putative CYP71AU50, Description = Cytochrome P450 750A1 family, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf05615_176608-182591' '(at3g14690 : 559.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 516.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 319.0) no description available & (gnl|cdd|84486 : 217.0) no description available & (reliability: 1118.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf05615_284399-293702' '(at3g14690 : 634.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 594.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 339.0) no description available & (gnl|cdd|84486 : 235.0) no description available & (reliability: 1268.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf05621_514506-521005' '(at1g13710 : 488.0) Encodes the cytochrome P450 CYP78A5 monooxygenase. Contributes to the generation of a growth-stimulating signal distinct from the classical phytohormones that prevents proliferation arrest, promoting organ growth.; "cytochrome P450, family 78, subfamily A, polypeptide 5" (CYP78A5); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: in 7 processes; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 78, subfamily A, polypeptide 10 (TAIR:AT1G74110.1); Has 31179 Blast hits to 31066 proteins in 1571 species: Archae - 49; Bacteria - 2905; Metazoa - 11364; Fungi - 6716; Plants - 9120; Viruses - 3; Other Eukaryotes - 1022 (source: NCBI BLink). & (o48927|c78a3_soybn : 454.0) Cytochrome P450 78A3 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|35378 : 372.0) no description available & (gnl|cdd|84486 : 235.0) no description available & (reliability: 976.0) & (original description: Putative CYP78A5, Description = Cytochrome P450 78A5, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf05665_3721-7305' '(p37123|c77a1_solme : 763.0) Cytochrome P450 77A1 (EC 1.14.-.-) (CYPLXXVIIA1) (P-450EG6) (Fragment) - Solanum melongena (Eggplant) (Aubergine) & (at5g04660 : 661.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 77, subfamily A, polypeptide 4" (CYP77A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT3G10560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35378 : 412.0) no description available & (gnl|cdd|84486 : 347.0) no description available & (reliability: 1322.0) & (original description: Putative CYP77A3, Description = Cytochrome P450 77A3, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf05698_15509-18972' '(at2g27690 : 575.0) Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment.; "cytochrome P450, family 94, subfamily C, polypeptide 1" (CYP94C1); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 3 (TAIR:AT3G48520.1); Has 28009 Blast hits to 27927 proteins in 1460 species: Archae - 46; Bacteria - 2607; Metazoa - 10748; Fungi - 6059; Plants - 7560; Viruses - 3; Other Eukaryotes - 986 (source: NCBI BLink). & (gnl|cdd|35379 : 324.0) no description available & (gnl|cdd|84486 : 178.0) no description available & (o48921|c97b2_soybn : 106.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1150.0) & (original description: Putative CYP94C9, Description = Cytochrome P450 family 94 protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf05702_232396-236036' '(at2g42850 : 541.0) member of CYP718; "cytochrome P450, family 718" (CYP718); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 1 (TAIR:AT5G36110.1); Has 34767 Blast hits to 34691 proteins in 1811 species: Archae - 71; Bacteria - 7179; Metazoa - 11081; Fungi - 6228; Plants - 8366; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (gnl|cdd|35379 : 276.0) no description available & (q6f4f5|c724b_orysa : 196.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (gnl|cdd|84486 : 195.0) no description available & (reliability: 1082.0) & (original description: Putative CYP718, Description = Taxadiene 5-alpha hydroxylase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf05824_982162-988531' '(gnl|cdd|35378 : 360.0) no description available & (at2g45570 : 325.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 2" (CYP76C2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, sepal, male gametophyte, carpel, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 34313 Blast hits to 34043 proteins in 1718 species: Archae - 48; Bacteria - 4021; Metazoa - 12101; Fungi - 7308; Plants - 9587; Viruses - 3; Other Eukaryotes - 1245 (source: NCBI BLink). & (gnl|cdd|84486 : 284.0) no description available & (p37122|c76a2_solme : 264.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (reliability: 650.0) & (original description: Putative CYP80B3, Description = (S)-N-methylcoclaurine 3'-hydroxylase isozyme 1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf05931_63471-69874' '(at1g19630 : 407.0) member of CYP722A; "cytochrome P450, family 722, subfamily A, polypeptide 1" (CYP722A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 1 (TAIR:AT4G19230.1); Has 35375 Blast hits to 35292 proteins in 1804 species: Archae - 63; Bacteria - 6821; Metazoa - 11890; Fungi - 5888; Plants - 8751; Viruses - 3; Other Eukaryotes - 1959 (source: NCBI BLink). & (gnl|cdd|35379 : 238.0) no description available & (gnl|cdd|84486 : 195.0) no description available & (q8gsq1|c85a1_orysa : 187.0) Cytochrome P450 85A1 (EC 1.14.-.-) (C6-oxidase) (OsDWARF) (Dwarf protein) - Oryza sativa (Rice) & (reliability: 814.0) & (original description: Putative glysoja_000185, Description = Taxane 13-alpha-hydroxylase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf06310_70044-73640' '(p37123|c77a1_solme : 763.0) Cytochrome P450 77A1 (EC 1.14.-.-) (CYPLXXVIIA1) (P-450EG6) (Fragment) - Solanum melongena (Eggplant) (Aubergine) & (at5g04660 : 628.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 77, subfamily A, polypeptide 4" (CYP77A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT3G10560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35378 : 408.0) no description available & (gnl|cdd|84486 : 343.0) no description available & (reliability: 1256.0) & (original description: Putative CYP77A1, Description = Cytochrome P450 77A1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf06405_73422-81221' '(at3g19270 : 599.0) Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family.; "cytochrome P450, family 707, subfamily A, polypeptide 4" (CYP707A4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 1 (TAIR:AT4G19230.1); Has 34460 Blast hits to 34219 proteins in 1800 species: Archae - 82; Bacteria - 7577; Metazoa - 11415; Fungi - 5354; Plants - 8009; Viruses - 6; Other Eukaryotes - 2017 (source: NCBI BLink). & (gnl|cdd|35379 : 274.0) no description available & (q69f95|c85a_phavu : 224.0) Cytochrome P450 85A (EC 1.14.-.-) (C6-oxidase) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|32307 : 209.0) no description available & (reliability: 1198.0) & (original description: Putative CYP707A7, Description = Abscisic acid 8'-hydroxylase 3, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf06436_46702-51437' '(o48927|c78a3_soybn : 702.0) Cytochrome P450 78A3 (EC 1.14.-.-) - Glycine max (Soybean) & (at2g46660 : 665.0) member of CYP78A; "cytochrome P450, family 78, subfamily A, polypeptide 6" (CYP78A6); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome p450 78a9 (TAIR:AT3G61880.2); Has 32637 Blast hits to 32519 proteins in 1695 species: Archae - 48; Bacteria - 3588; Metazoa - 11617; Fungi - 7095; Plants - 9209; Viruses - 3; Other Eukaryotes - 1077 (source: NCBI BLink). & (gnl|cdd|35378 : 376.0) no description available & (gnl|cdd|84486 : 247.0) no description available & (reliability: 1330.0) & (original description: Putative mnd, Description = Cytochrome P450 78A4, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf06751_117575-126328' '(q05047|c72a1_catro : 579.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g14690 : 576.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (gnl|cdd|35379 : 328.0) no description available & (gnl|cdd|84486 : 239.0) no description available & (reliability: 1152.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf06825_189062-201816' '(at1g73340 : 639.0) Cytochrome P450 superfamily protein; FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT3G50660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35379 : 270.0) no description available & (q94iw5|c90d2_orysa : 259.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|84486 : 187.0) no description available & (reliability: 1278.0) & (original description: Putative CYP720B2, Description = Cytochrome P450 720B2, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf07231_441393-447638' '(gnl|cdd|35378 : 441.0) no description available & (at5g10600 : 429.0) member of CYP81K; "cytochrome P450, family 81, subfamily K, polypeptide 2" (CYP81K2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily K, polypeptide 1 (TAIR:AT5G10610.1); Has 31994 Blast hits to 31803 proteins in 1635 species: Archae - 50; Bacteria - 3220; Metazoa - 11846; Fungi - 6519; Plants - 9340; Viruses - 3; Other Eukaryotes - 1016 (source: NCBI BLink). & (gnl|cdd|84486 : 289.0) no description available & (p48418|c75a1_pethy : 282.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (reliability: 858.0) & (original description: Putative CYP6, Description = Cytochrome P450, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf07234_70945-76675' '(q6f4f5|c724b_orysa : 635.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (at3g50660 : 410.0) Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate.; DWARF 4 (DWF4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G05690.1); Has 31120 Blast hits to 31036 proteins in 1650 species: Archae - 61; Bacteria - 5303; Metazoa - 10591; Fungi - 5722; Plants - 7996; Viruses - 3; Other Eukaryotes - 1444 (source: NCBI BLink). & (gnl|cdd|35379 : 273.0) no description available & (gnl|cdd|84486 : 179.0) no description available & (reliability: 794.0) & (original description: Putative CYP724B1, Description = Cytochrome P450 724B1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf07242_113722-117574' '(gnl|cdd|35378 : 436.0) no description available & (at5g10600 : 423.0) member of CYP81K; "cytochrome P450, family 81, subfamily K, polypeptide 2" (CYP81K2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily K, polypeptide 1 (TAIR:AT5G10610.1); Has 31994 Blast hits to 31803 proteins in 1635 species: Archae - 50; Bacteria - 3220; Metazoa - 11846; Fungi - 6519; Plants - 9340; Viruses - 3; Other Eukaryotes - 1016 (source: NCBI BLink). & (q43068|c82a1_pea : 295.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (gnl|cdd|84486 : 291.0) no description available & (reliability: 846.0) & (original description: Putative p450, Description = Isoflavone 2'-hydroxylase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf07242_744099-749608' '(at4g37370 : 483.0) member of CYP81D; "cytochrome P450, family 81, subfamily D, polypeptide 8" (CYP81D8); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to karrikin; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 3 (TAIR:AT4G37340.1); Has 35915 Blast hits to 35767 proteins in 1837 species: Archae - 61; Bacteria - 5629; Metazoa - 11821; Fungi - 7460; Plants - 9456; Viruses - 3; Other Eukaryotes - 1485 (source: NCBI BLink). & (gnl|cdd|35378 : 461.0) no description available & (q43068|c82a1_pea : 310.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (gnl|cdd|84486 : 278.0) no description available & (reliability: 966.0) & (original description: Putative CYP81F3, Description = Cytochrome P450 81F3, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf07288_919811-924250' '(at4g19230 : 754.0) Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy.; "cytochrome P450, family 707, subfamily A, polypeptide 1" (CYP707A1); FUNCTIONS IN: oxygen binding, (+)-abscisic acid 8'-hydroxylase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 3 (TAIR:AT5G45340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35379 : 283.0) no description available & (q8gsq1|c85a1_orysa : 258.0) Cytochrome P450 85A1 (EC 1.14.-.-) (C6-oxidase) (OsDWARF) (Dwarf protein) - Oryza sativa (Rice) & (gnl|cdd|84486 : 219.0) no description available & (reliability: 1480.0) & (original description: Putative CYP707A1, Description = Abscisic acid 8'-hydroxylase 1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf07374_91568-97219' '(at3g52970 : 639.0) member of CYP76G; "cytochrome P450, family 76, subfamily G, polypeptide 1" (CYP76G1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1). & (p37122|c76a2_solme : 430.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|35378 : 429.0) no description available & (gnl|cdd|84486 : 317.0) no description available & (reliability: 1278.0) & (original description: Putative gfh2, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf07391_150043-153528' '(at1g12740 : 740.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 87, subfamily A, polypeptide 2" (CYP87A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 3 (TAIR:AT1G78490.1). & (q7xu38|c87a3_orysa : 652.0) Cytochrome P450 87A3 (EC 1.14.-.-) - Oryza sativa (Rice) & (gnl|cdd|35379 : 300.0) no description available & (gnl|cdd|84486 : 191.0) no description available & (reliability: 1480.0) & (original description: Putative CYP87A3, Description = Cytochrome P450 87A3, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf07508_477926-483587' '(gnl|cdd|35378 : 439.0) no description available & (at5g10600 : 423.0) member of CYP81K; "cytochrome P450, family 81, subfamily K, polypeptide 2" (CYP81K2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily K, polypeptide 1 (TAIR:AT5G10610.1); Has 31994 Blast hits to 31803 proteins in 1635 species: Archae - 50; Bacteria - 3220; Metazoa - 11846; Fungi - 6519; Plants - 9340; Viruses - 3; Other Eukaryotes - 1016 (source: NCBI BLink). & (p48418|c75a1_pethy : 283.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 283.0) no description available & (reliability: 846.0) & (original description: Putative TCP3, Description = Cytochrome P450, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf07516_456743-461221' '(at2g45510 : 644.0) member of CYP704A; "cytochrome P450, family 704, subfamily A, polypeptide 2" (CYP704A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 704, subfamily A, polypeptide 1 (TAIR:AT2G44890.1); Has 29367 Blast hits to 29266 proteins in 1497 species: Archae - 44; Bacteria - 2694; Metazoa - 10887; Fungi - 6277; Plants - 8316; Viruses - 3; Other Eukaryotes - 1146 (source: NCBI BLink). & (gnl|cdd|35379 : 343.0) no description available & (gnl|cdd|84486 : 218.0) no description available & (o48921|c97b2_soybn : 123.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1288.0) & (original description: Putative CYP704C1, Description = Cytochrome P450 704C1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf07673_63112-95764' '(gnl|cdd|35378 : 194.0) no description available & (at2g42250 : 169.0) member of CYP712A; "cytochrome P450, family 712, subfamily A, polypeptide 1" (CYP712A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 712, subfamily A, polypeptide 2 (TAIR:AT5G06905.1); Has 33836 Blast hits to 33605 proteins in 1717 species: Archae - 51; Bacteria - 3923; Metazoa - 11889; Fungi - 7248; Plants - 9502; Viruses - 6; Other Eukaryotes - 1217 (source: NCBI BLink). & (gnl|cdd|84486 : 146.0) no description available & (o81973|c93a3_soybn : 132.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (reliability: 338.0) & (original description: Putative BnaA03g25830D, Description = BnaA03g25830D protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf07673_93141-140455' '(gnl|cdd|35378 : 193.0) no description available & (gnl|cdd|84486 : 172.0) no description available & (at2g42250 : 171.0) member of CYP712A; "cytochrome P450, family 712, subfamily A, polypeptide 1" (CYP712A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 712, subfamily A, polypeptide 2 (TAIR:AT5G06905.1); Has 33836 Blast hits to 33605 proteins in 1717 species: Archae - 51; Bacteria - 3923; Metazoa - 11889; Fungi - 7248; Plants - 9502; Viruses - 6; Other Eukaryotes - 1217 (source: NCBI BLink). & (q42798|c93a1_soybn : 135.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 342.0) & (original description: Putative cpr, Description = Cytochrome P450 93A1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf07695_163251-169935' '(at3g14690 : 600.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 588.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 347.0) no description available & (gnl|cdd|84486 : 240.0) no description available & (reliability: 1200.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf07790_231048-234855' '(at1g11600 : 711.0) member of CYP77B; "cytochrome P450, family 77, subfamily B, polypeptide 1" (CYP77B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 77, subfamily A, polypeptide 9 (TAIR:AT5G04630.1); Has 32592 Blast hits to 32103 proteins in 1633 species: Archae - 48; Bacteria - 3170; Metazoa - 12143; Fungi - 6852; Plants - 9226; Viruses - 3; Other Eukaryotes - 1150 (source: NCBI BLink). & (o48928|c77a3_soybn : 432.0) Cytochrome P450 77A3 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|35378 : 370.0) no description available & (gnl|cdd|84486 : 285.0) no description available & (reliability: 1422.0) & (original description: Putative cytochrome P450 CYP77B21, Description = Cytochrome P450 CYP77B21, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf07817_169232-175264' '(at2g45550 : 434.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 4" (CYP76C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 1 (TAIR:AT2G45560.1); Has 35109 Blast hits to 34843 proteins in 1784 species: Archae - 57; Bacteria - 4750; Metazoa - 11986; Fungi - 7467; Plants - 9491; Viruses - 6; Other Eukaryotes - 1352 (source: NCBI BLink). & (gnl|cdd|35378 : 386.0) no description available & (p37122|c76a2_solme : 337.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 260.0) no description available & (reliability: 868.0) & (original description: Putative cpr, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067;PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf07817_246656-252399' '(at2g45550 : 479.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 4" (CYP76C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 1 (TAIR:AT2G45560.1); Has 35109 Blast hits to 34843 proteins in 1784 species: Archae - 57; Bacteria - 4750; Metazoa - 11986; Fungi - 7467; Plants - 9491; Viruses - 6; Other Eukaryotes - 1352 (source: NCBI BLink). & (gnl|cdd|35378 : 443.0) no description available & (p37122|c76a2_solme : 377.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 304.0) no description available & (reliability: 958.0) & (original description: Putative cpr, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf07939_51702-57227' '(at5g36110 : 594.0) member of CYP716A; "cytochrome P450, family 716, subfamily A, polypeptide 1" (CYP716A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 2 (TAIR:AT5G36140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 274.0) no description available & (q94iw5|c90d2_orysa : 216.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|32307 : 200.0) no description available & (reliability: 1188.0) & (original description: Putative ATH1, Description = Cytochrome P450, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf08195_633820-637562' '(at5g36110 : 431.0) member of CYP716A; "cytochrome P450, family 716, subfamily A, polypeptide 1" (CYP716A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 2 (TAIR:AT5G36140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 256.0) no description available & (gnl|cdd|32307 : 198.0) no description available & (q8gsq1|c85a1_orysa : 191.0) Cytochrome P450 85A1 (EC 1.14.-.-) (C6-oxidase) (OsDWARF) (Dwarf protein) - Oryza sativa (Rice) & (reliability: 862.0) & (original description: Putative ATH1, Description = Cytochrome P450, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf08430_115890-120505' '(at4g31970 : 455.0) member of CYP82C; "cytochrome P450, family 82, subfamily C, polypeptide 2" (CYP82C2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 82, subfamily C, polypeptide 4 (TAIR:AT4G31940.1); Has 33251 Blast hits to 33030 proteins in 1722 species: Archae - 60; Bacteria - 4009; Metazoa - 11748; Fungi - 6717; Plants - 9506; Viruses - 3; Other Eukaryotes - 1208 (source: NCBI BLink). & (gnl|cdd|35378 : 424.0) no description available & (o49859|c82a4_soybn : 413.0) Cytochrome P450 82A4 (EC 1.14.-.-) (P450 CP9) - Glycine max (Soybean) & (gnl|cdd|84486 : 264.0) no description available & (reliability: 910.0) & (original description: Putative CYP82C3, Description = Cytochrome P450 82C3, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf08887_21909-27230' '(at3g14630 : 472.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 9" (CYP72A9); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, sepal, leaf, stamen; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 15 (TAIR:AT3G14690.1); Has 33639 Blast hits to 33491 proteins in 1708 species: Archae - 69; Bacteria - 5909; Metazoa - 11396; Fungi - 6462; Plants - 8229; Viruses - 3; Other Eukaryotes - 1571 (source: NCBI BLink). & (q05047|c72a1_catro : 449.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 312.0) no description available & (gnl|cdd|84486 : 235.0) no description available & (reliability: 944.0) & (original description: Putative cyp03, Description = Secologanin synthase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf09025_1406-4905' '(at3g48520 : 580.0) member of CYP94B; "cytochrome P450, family 94, subfamily B, polypeptide 3" (CYP94B3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 1 (TAIR:AT5G63450.1); Has 27655 Blast hits to 27536 proteins in 1435 species: Archae - 44; Bacteria - 2616; Metazoa - 10459; Fungi - 5693; Plants - 7745; Viruses - 3; Other Eukaryotes - 1095 (source: NCBI BLink). & (gnl|cdd|35379 : 395.0) no description available & (gnl|cdd|84486 : 219.0) no description available & (q05047|c72a1_catro : 101.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 1160.0) & (original description: Putative CYP94B3, Description = Cytochrome P450 94B3, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf09172_314487-321414' '(at1g75130 : 504.0) member of CYP721A; "cytochrome P450, family 721, subfamily A, polypeptide 1" (CYP721A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT2G26710.1); Has 31101 Blast hits to 31007 proteins in 1591 species: Archae - 75; Bacteria - 4273; Metazoa - 11060; Fungi - 6215; Plants - 8065; Viruses - 3; Other Eukaryotes - 1410 (source: NCBI BLink). & (q05047|c72a1_catro : 358.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 305.0) no description available & (gnl|cdd|84486 : 227.0) no description available & (reliability: 1008.0) & (original description: Putative Sb09g019950, Description = Putative uncharacterized protein Sb09g019950, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf09223_323118-335433' '(q42798|c93a1_soybn : 585.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|35378 : 487.0) no description available & (at5g06900 : 477.0) member of CYP93D; "cytochrome P450, family 93, subfamily D, polypeptide 1" (CYP93D1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 712, subfamily A, polypeptide 1 (TAIR:AT2G42250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84486 : 306.0) no description available & (reliability: 954.0) & (original description: Putative CYP93A1, Description = 3,9-dihydroxypterocarpan 6A-monooxygenase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf09565_173572-177098' '(at2g23180 : 474.0) member of CYP96A; "cytochrome P450, family 96, subfamily A, polypeptide 1" (CYP96A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 96, subfamily A, polypeptide 9 (TAIR:AT4G39480.1); Has 27906 Blast hits to 27823 proteins in 1447 species: Archae - 44; Bacteria - 2407; Metazoa - 10493; Fungi - 6010; Plants - 7891; Viruses - 3; Other Eukaryotes - 1058 (source: NCBI BLink). & (gnl|cdd|35379 : 341.0) no description available & (gnl|cdd|84486 : 165.0) no description available & (o48921|c97b2_soybn : 105.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 948.0) & (original description: Putative CYP96A15, Description = Alkane hydroxylase MAH1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf09620_502559-558951' '(o48927|c78a3_soybn : 672.0) Cytochrome P450 78A3 (EC 1.14.-.-) - Glycine max (Soybean) & (at2g46660 : 668.0) member of CYP78A; "cytochrome P450, family 78, subfamily A, polypeptide 6" (CYP78A6); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome p450 78a9 (TAIR:AT3G61880.2); Has 32637 Blast hits to 32519 proteins in 1695 species: Archae - 48; Bacteria - 3588; Metazoa - 11617; Fungi - 7095; Plants - 9209; Viruses - 3; Other Eukaryotes - 1077 (source: NCBI BLink). & (gnl|cdd|35378 : 391.0) no description available & (gnl|cdd|84486 : 242.0) no description available & (reliability: 1336.0) & (original description: Putative mnd, Description = Cytochrome P450 78A4, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf09649_545642-549970' '(at5g09970 : 693.0) member of CYP78A; "cytochrome P450, family 78, subfamily A, polypeptide 7" (CYP78A7); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: regulation of meristem growth; EXPRESSED IN: embryo, leaf primordium, shoot lateral meristem, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 78, subfamily A, polypeptide 6 (TAIR:AT2G46660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7y1v5|c78ab_orysa : 599.0) Cytochrome P450 78A11 (EC 1.14.-.-) (Protein PLASTOCHRON1) - Oryza sativa (Rice) & (gnl|cdd|35378 : 402.0) no description available & (gnl|cdd|84486 : 264.0) no description available & (reliability: 1386.0) & (original description: Putative CYP78A7, Description = Cytochrome P450 78A7, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf09685_12312-18510' '(q6f4f5|c724b_orysa : 473.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (at3g50660 : 402.0) Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate.; DWARF 4 (DWF4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G05690.1); Has 31120 Blast hits to 31036 proteins in 1650 species: Archae - 61; Bacteria - 5303; Metazoa - 10591; Fungi - 5722; Plants - 7996; Viruses - 3; Other Eukaryotes - 1444 (source: NCBI BLink). & (gnl|cdd|35379 : 244.0) no description available & (gnl|cdd|84486 : 158.0) no description available & (reliability: 776.0) & (original description: Putative CYP724B1, Description = Cytochrome P450 724B1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf09685_20992-26720' '(q6f4f5|c724b_orysa : 439.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (at3g50660 : 360.0) Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate.; DWARF 4 (DWF4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G05690.1); Has 31120 Blast hits to 31036 proteins in 1650 species: Archae - 61; Bacteria - 5303; Metazoa - 10591; Fungi - 5722; Plants - 7996; Viruses - 3; Other Eukaryotes - 1444 (source: NCBI BLink). & (gnl|cdd|35379 : 228.0) no description available & (gnl|cdd|84486 : 156.0) no description available & (reliability: 706.0) & (original description: Putative CYP724B1, Description = Cytochrome P450 724B1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf09685_21865-26544' '(q6f4f5|c724b_orysa : 316.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (at3g50660 : 278.0) Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate.; DWARF 4 (DWF4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G05690.1); Has 31120 Blast hits to 31036 proteins in 1650 species: Archae - 61; Bacteria - 5303; Metazoa - 10591; Fungi - 5722; Plants - 7996; Viruses - 3; Other Eukaryotes - 1444 (source: NCBI BLink). & (gnl|cdd|35379 : 176.0) no description available & (gnl|cdd|84486 : 129.0) no description available & (reliability: 542.0) & (original description: Putative D11, Description = Cytochrome P450 90B1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf09994_24972-28944' '(gnl|cdd|35378 : 413.0) no description available & (at2g45550 : 381.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 4" (CYP76C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 1 (TAIR:AT2G45560.1); Has 35109 Blast hits to 34843 proteins in 1784 species: Archae - 57; Bacteria - 4750; Metazoa - 11986; Fungi - 7467; Plants - 9491; Viruses - 6; Other Eukaryotes - 1352 (source: NCBI BLink). & (p48418|c75a1_pethy : 311.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 281.0) no description available & (reliability: 762.0) & (original description: Putative CS, Description = Corytuberine synthase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf09996_12860-24725' '(at5g36110 : 425.0) member of CYP716A; "cytochrome P450, family 716, subfamily A, polypeptide 1" (CYP716A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 2 (TAIR:AT5G36140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 262.0) no description available & (q6f4f5|c724b_orysa : 198.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (gnl|cdd|84486 : 185.0) no description available & (reliability: 850.0) & (original description: Putative ATH1, Description = Cytochrome P450, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf10032_16679-20308' '(o81974|c71d8_soybn : 532.0) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) & (gnl|cdd|35378 : 464.0) no description available & (at3g26320 : 404.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 36" (CYP71B36); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, LP.02 two leaves visible, 4 leaf senescence stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 37 (TAIR:AT3G26330.1); Has 32048 Blast hits to 31771 proteins in 1644 species: Archae - 44; Bacteria - 2893; Metazoa - 12018; Fungi - 6634; Plants - 9453; Viruses - 3; Other Eukaryotes - 1003 (source: NCBI BLink). & (gnl|cdd|84486 : 305.0) no description available & (reliability: 808.0) & (original description: Putative CYP71D55, Description = Premnaspirodiene oxygenase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf10032_183159-187382' '(gnl|cdd|35378 : 474.0) no description available & (at2g45550 : 445.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 4" (CYP76C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 1 (TAIR:AT2G45560.1); Has 35109 Blast hits to 34843 proteins in 1784 species: Archae - 57; Bacteria - 4750; Metazoa - 11986; Fungi - 7467; Plants - 9491; Viruses - 6; Other Eukaryotes - 1352 (source: NCBI BLink). & (p37122|c76a2_solme : 387.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 330.0) no description available & (reliability: 890.0) & (original description: Putative gfh2, Description = Putative ripening-related P-450 enzyme, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf10101_46912-53075' '(at3g14690 : 597.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 591.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 346.0) no description available & (gnl|cdd|84486 : 240.0) no description available & (reliability: 1194.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf10232_363045-369488' '(q43135|c79a1_sorbi : 175.0) Cytochrome P450 79A1 (EC 1.14.13.41) (Tyrosine N-monooxygenase) (Cytochrome P450Tyr) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (at5g05260 : 173.0) Encodes cytochrome P450 CYP79A2.; cytochrome p450 79a2 (CYP79A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene (TAIR:AT5G35917.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35378 : 108.0) no description available & (gnl|cdd|84486 : 89.6) no description available & (reliability: 346.0) & (original description: Putative CYP79, Description = Tyrosine N-monooxygenase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf10415_1664-22200' '(at4g19230 : 741.0) Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy.; "cytochrome P450, family 707, subfamily A, polypeptide 1" (CYP707A1); FUNCTIONS IN: oxygen binding, (+)-abscisic acid 8'-hydroxylase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 3 (TAIR:AT5G45340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35379 : 297.0) no description available & (q8gsq1|c85a1_orysa : 264.0) Cytochrome P450 85A1 (EC 1.14.-.-) (C6-oxidase) (OsDWARF) (Dwarf protein) - Oryza sativa (Rice) & (gnl|cdd|84486 : 224.0) no description available & (reliability: 1458.0) & (original description: Putative CYP707A1, Description = Abscisic acid 8'-hydroxylase 1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf10708_6090-10136' '(gnl|cdd|35378 : 453.0) no description available & (at4g37330 : 439.0) member of CYP81D; "cytochrome P450, family 81, subfamily D, polypeptide 4" (CYP81D4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 5 (TAIR:AT4G37320.1); Has 36638 Blast hits to 36468 proteins in 1879 species: Archae - 61; Bacteria - 6348; Metazoa - 11702; Fungi - 7393; Plants - 9479; Viruses - 6; Other Eukaryotes - 1649 (source: NCBI BLink). & (q43068|c82a1_pea : 300.0) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) & (gnl|cdd|84486 : 276.0) no description available & (reliability: 878.0) & (original description: Putative CYP81E7, Description = Isoflavone 2'-hydroxylase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf10999_180566-185459' '(gnl|cdd|35378 : 468.0) no description available & (at5g07990 : 370.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (p48418|c75a1_pethy : 357.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (gnl|cdd|84486 : 330.0) no description available & (reliability: 712.0) & (original description: Putative f3', Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf11215_113832-120918' '(at3g14690 : 653.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 623.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 349.0) no description available & (gnl|cdd|84486 : 245.0) no description available & (reliability: 1306.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf11215_152843-157912' '(at3g14690 : 595.0) putative cytochrome P450; "cytochrome P450, family 72, subfamily A, polypeptide 15" (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). & (q05047|c72a1_catro : 561.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 330.0) no description available & (gnl|cdd|84486 : 215.0) no description available & (reliability: 1190.0) & (original description: Putative sls, Description = Secologanin synthase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf11401_44642-57499' '(at1g74110 : 665.0) member of CYP78A; "cytochrome P450, family 78, subfamily A, polypeptide 10" (CYP78A10); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 78, subfamily A, polypeptide 5 (TAIR:AT1G13710.1); Has 31373 Blast hits to 31249 proteins in 1617 species: Archae - 44; Bacteria - 2867; Metazoa - 11374; Fungi - 6846; Plants - 9229; Viruses - 3; Other Eukaryotes - 1010 (source: NCBI BLink). & (o48927|c78a3_soybn : 487.0) Cytochrome P450 78A3 (EC 1.14.-.-) - Glycine max (Soybean) & (gnl|cdd|35378 : 434.0) no description available & (gnl|cdd|84486 : 258.0) no description available & (reliability: 1330.0) & (original description: Putative CYP78A5, Description = Cytochrome P450 78A5, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf12205_293246-297176' '(at5g36110 : 436.0) member of CYP716A; "cytochrome P450, family 716, subfamily A, polypeptide 1" (CYP716A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 2 (TAIR:AT5G36140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 255.0) no description available & (q94iw5|c90d2_orysa : 196.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|32307 : 187.0) no description available & (reliability: 872.0) & (original description: Putative cytochrome P450 CYP725B1, Description = Cytochrome P450 CYP725B1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf13221_34103-38399' '(gnl|cdd|35378 : 505.0) no description available & (at4g31500 : 495.0) Encodes an oxime-metabolizing enzyme in the biosynthetic pathway of glucosinolates. Is required for phytochrome signal transduction in red light. Mutation confers auxin overproduction.; "cytochrome P450, family 83, subfamily B, polypeptide 1" (CYP83B1); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, oxygen binding; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 83, subfamily A, polypeptide 1 (TAIR:AT4G13770.1); Has 32513 Blast hits to 32256 proteins in 1630 species: Archae - 47; Bacteria - 2956; Metazoa - 11814; Fungi - 7162; Plants - 9504; Viruses - 6; Other Eukaryotes - 1024 (source: NCBI BLink). & (o81970|c71a9_soybn : 441.0) Cytochrome P450 71A9 (EC 1.14.-.-) (P450 CP1) - Glycine max (Soybean) & (gnl|cdd|84486 : 327.0) no description available & (reliability: 990.0) & (original description: Putative c15, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf13833_336568-346755' '(o81970|c71a9_soybn : 539.0) Cytochrome P450 71A9 (EC 1.14.-.-) (P450 CP1) - Glycine max (Soybean) & (gnl|cdd|35378 : 500.0) no description available & (at3g26310 : 414.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily B, polypeptide 35" (CYP71B35); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32954 Blast hits to 32730 proteins in 1688 species: Archae - 50; Bacteria - 3268; Metazoa - 12013; Fungi - 6975; Plants - 9526; Viruses - 3; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|84486 : 299.0) no description available & (reliability: 828.0) & (original description: Putative CYP71A9, Description = Cytochrome P450 71A9, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf14831_18874-22421' '(at1g64940 : 553.0) member of CYP89A; "cytochrome P450, family 87, subfamily A, polypeptide 6" (CYP89A6); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 89, subfamily A, polypeptide 5 (TAIR:AT1G64950.1); Has 33831 Blast hits to 33673 proteins in 1720 species: Archae - 52; Bacteria - 4308; Metazoa - 11763; Fungi - 7071; Plants - 9227; Viruses - 3; Other Eukaryotes - 1407 (source: NCBI BLink). & (gnl|cdd|35378 : 387.0) no description available & (p37123|c77a1_solme : 356.0) Cytochrome P450 77A1 (EC 1.14.-.-) (CYPLXXVIIA1) (P-450EG6) (Fragment) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 271.0) no description available & (reliability: 1106.0) & (original description: Putative CYP89A9, Description = Cytochrome P450 89A9, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf17594_56137-60331' '(gnl|cdd|35378 : 504.0) no description available & (at4g31500 : 472.0) Encodes an oxime-metabolizing enzyme in the biosynthetic pathway of glucosinolates. Is required for phytochrome signal transduction in red light. Mutation confers auxin overproduction.; "cytochrome P450, family 83, subfamily B, polypeptide 1" (CYP83B1); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, oxygen binding; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 83, subfamily A, polypeptide 1 (TAIR:AT4G13770.1); Has 32513 Blast hits to 32256 proteins in 1630 species: Archae - 47; Bacteria - 2956; Metazoa - 11814; Fungi - 7162; Plants - 9504; Viruses - 6; Other Eukaryotes - 1024 (source: NCBI BLink). & (o81970|c71a9_soybn : 419.0) Cytochrome P450 71A9 (EC 1.14.-.-) (P450 CP1) - Glycine max (Soybean) & (gnl|cdd|84486 : 321.0) no description available & (reliability: 944.0) & (original description: Putative c15, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf18418_244994-250012' '(at5g36110 : 318.0) member of CYP716A; "cytochrome P450, family 716, subfamily A, polypeptide 1" (CYP716A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 2 (TAIR:AT5G36140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 220.0) no description available & (q94iw5|c90d2_orysa : 189.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (gnl|cdd|32307 : 164.0) no description available & (reliability: 636.0) & (original description: Putative ATH1, Description = Cytochrome P450, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf19458_22450-26054' '(at2g27690 : 568.0) Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment.; "cytochrome P450, family 94, subfamily C, polypeptide 1" (CYP94C1); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 3 (TAIR:AT3G48520.1); Has 28009 Blast hits to 27927 proteins in 1460 species: Archae - 46; Bacteria - 2607; Metazoa - 10748; Fungi - 6059; Plants - 7560; Viruses - 3; Other Eukaryotes - 986 (source: NCBI BLink). & (gnl|cdd|35379 : 310.0) no description available & (gnl|cdd|84486 : 175.0) no description available & (o48921|c97b2_soybn : 102.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1136.0) & (original description: Putative CYP94C1, Description = Cytochrome P450 94C1, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf22469_1-3670' '(o22307|c71db_lotja : 326.0) Cytochrome P450 71D11 (EC 1.14.-.-) (Fragment) - Lotus japonicus & (gnl|cdd|35378 : 294.0) no description available & (at3g48270 : 236.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily A, polypeptide 26" (CYP71A26); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 22 (TAIR:AT3G48310.1); Has 32796 Blast hits to 32545 proteins in 1644 species: Archae - 46; Bacteria - 3223; Metazoa - 11825; Fungi - 7001; Plants - 9620; Viruses - 3; Other Eukaryotes - 1078 (source: NCBI BLink). & (gnl|cdd|84486 : 156.0) no description available & (reliability: 472.0) & (original description: Putative COS, Description = Cytochrome P450 family 71 protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf25279_445-6215' '(at5g38450 : 724.0) member of CYP709A; "cytochrome P450, family 735, subfamily A, polypeptide 1" (CYP735A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, root, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 735, subfamily A, polypeptide 2 (TAIR:AT1G67110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35379 : 347.0) no description available & (q05047|c72a1_catro : 331.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|84486 : 240.0) no description available & (reliability: 1448.0) & (original description: Putative CYP735A1, Description = Cytokinin hydroxylase, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf27001_74145-78365' '(gnl|cdd|35378 : 401.0) no description available & (at2g45570 : 386.0) member of CYP76C; "cytochrome P450, family 76, subfamily C, polypeptide 2" (CYP76C2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, sepal, male gametophyte, carpel, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 34313 Blast hits to 34043 proteins in 1718 species: Archae - 48; Bacteria - 4021; Metazoa - 12101; Fungi - 7308; Plants - 9587; Viruses - 3; Other Eukaryotes - 1245 (source: NCBI BLink). & (p37122|c76a2_solme : 334.0) Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|84486 : 309.0) no description available & (reliability: 772.0) & (original description: Putative gfh2, Description = Cytochrome P450 76AD1-like protein, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf28705_1-3161' '(p37117|c71a4_solme : 710.0) Cytochrome P450 71A4 (EC 1.14.-.-) (CYPLXXIA4) (P-450EG2) - Solanum melongena (Eggplant) (Aubergine) & (gnl|cdd|35378 : 502.0) no description available & (at3g48290 : 501.0) putative cytochrome P450; "cytochrome P450, family 71, subfamily A, polypeptide 24" (CYP71A24); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 22 (TAIR:AT3G48310.1). & (gnl|cdd|84486 : 317.0) no description available & (reliability: 1002.0) & (original description: Putative CYP71A2, Description = Cytochrome P450 71A2, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf32536_66090-69649' '(at5g24910 : 169.0) member of CYP714A; "cytochrome P450, family 714, subfamily A, polypeptide 1" (CYP714A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 714, subfamily A, polypeptide 2 (TAIR:AT5G24900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q05047|c72a1_catro : 89.7) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35379 : 86.2) no description available & (reliability: 338.0) & (original description: Putative CYP714G3, Description = CYP450-17, PFAM = PF00067)' T '26.10' 'misc.cytochrome P450' 'niben101scf32649_29128-34804' '(p37124|c77a2_solme : 819.0) Cytochrome P450 77A2 (EC 1.14.-.-) (CYPLXXVIIA2) (P-450EG5) - Solanum melongena (Eggplant) (Aubergine) & (at5g04660 : 711.0) encodes a protein with cytochrome P450 domain; "cytochrome P450, family 77, subfamily A, polypeptide 4" (CYP77A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT3G10560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35378 : 400.0) no description available & (gnl|cdd|84486 : 361.0) no description available & (reliability: 1422.0) & (original description: Putative CYP77A2, Description = Cytochrome P450 77A2, PFAM = PF00067)' T '26.11' 'misc.alcohol dehydrogenases' 'nbv0.3scaffold3657_15751-23936' '(gnl|cdd|35245 : 317.0) no description available & (gnl|cdd|31262 : 266.0) no description available & (at1g32780 : 224.0) GroES-like zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT1G64710.1); Has 32235 Blast hits to 32213 proteins in 3118 species: Archae - 738; Bacteria - 20422; Metazoa - 1293; Fungi - 2369; Plants - 4116; Viruses - 3; Other Eukaryotes - 3294 (source: NCBI BLink). & (p48977|adh_maldo : 223.0) Alcohol dehydrogenase (EC 1.1.1.1) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 448.0) & (original description: Putative adh3, Description = S-(hydroxymethyl)glutathione dehydrogenase, PFAM = PF08240;PF00107)' T '26.11' 'misc.alcohol dehydrogenases' 'nbv0.5scaffold674_398972-406791' '(gnl|cdd|35245 : 385.0) no description available & (gnl|cdd|31262 : 320.0) no description available & (p48977|adh_maldo : 275.0) Alcohol dehydrogenase (EC 1.1.1.1) - Malus domestica (Apple) (Malus sylvestris) & (at1g22440 : 271.0) Zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT1G22430.2); Has 32607 Blast hits to 32587 proteins in 3168 species: Archae - 747; Bacteria - 20763; Metazoa - 1197; Fungi - 2370; Plants - 4104; Viruses - 3; Other Eukaryotes - 3423 (source: NCBI BLink). & (reliability: 542.0) & (original description: Putative ALDH, Description = Putative alcohol dehydrogenase, PFAM = PF00107;PF08240)' T '26.11' 'misc.alcohol dehydrogenases' 'nbv0.5scaffold6694_10119-15445' '(at5g42250 : 502.0) Zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT4G22110.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35245 : 444.0) no description available & (gnl|cdd|31262 : 344.0) no description available & (p25141|adh1_pethy : 337.0) Alcohol dehydrogenase 1 (EC 1.1.1.1) - Petunia hybrida (Petunia) & (reliability: 1004.0) & (original description: Putative adh3, Description = S-(hydroxymethyl)glutathione dehydrogenase, PFAM = PF08240;PF00107)' T '26.11' 'misc.alcohol dehydrogenases' 'niben044scf00004457ctg001_2704-5757' '(at3g42960 : 250.0) Arabidopsis homolog of TASSELSEED2. Expressed specifically in tapetal cells.; TAPETUM 1 (ATA1); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: flower development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26760.1); Has 115619 Blast hits to 115418 proteins in 3535 species: Archae - 928; Bacteria - 77402; Metazoa - 4592; Fungi - 5922; Plants - 2472; Viruses - 7; Other Eukaryotes - 24296 (source: NCBI BLink). & (gnl|cdd|35944 : 202.0) no description available & (gnl|cdd|84318 : 173.0) no description available & (p50160|ts2_maize : 143.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 500.0) & (original description: Putative TA1, Description = Short-chain dehydrogenase reductase ATA1, PFAM = PF13561)' T '26.11' 'misc.alcohol dehydrogenases' 'niben044scf00046740ctg005_5591-11406' '(at5g42250 : 573.0) Zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT4G22110.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35245 : 518.0) no description available & (p25141|adh1_pethy : 404.0) Alcohol dehydrogenase 1 (EC 1.1.1.1) - Petunia hybrida (Petunia) & (gnl|cdd|31262 : 393.0) no description available & (reliability: 1146.0) & (original description: Putative adh3, Description = S-(hydroxymethyl)glutathione dehydrogenase, PFAM = PF08240;PF00107)' T '26.11' 'misc.alcohol dehydrogenases' 'niben101scf00288_1875258-1879018' '(at3g42960 : 236.0) Arabidopsis homolog of TASSELSEED2. Expressed specifically in tapetal cells.; TAPETUM 1 (ATA1); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: flower development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26760.1); Has 115619 Blast hits to 115418 proteins in 3535 species: Archae - 928; Bacteria - 77402; Metazoa - 4592; Fungi - 5922; Plants - 2472; Viruses - 7; Other Eukaryotes - 24296 (source: NCBI BLink). & (gnl|cdd|35944 : 203.0) no description available & (gnl|cdd|84318 : 175.0) no description available & (p50160|ts2_maize : 145.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 472.0) & (original description: Putative TA1, Description = Short-chain dehydrogenase reductase ATA1, PFAM = PF13561)' T '26.11' 'misc.alcohol dehydrogenases' 'niben101scf01435_371203-377238' '(gnl|cdd|35245 : 544.0) no description available & (at1g64710 : 512.0) GroES-like zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT1G32780.1); Has 31850 Blast hits to 31834 proteins in 3141 species: Archae - 706; Bacteria - 20375; Metazoa - 1244; Fungi - 2231; Plants - 4096; Viruses - 3; Other Eukaryotes - 3195 (source: NCBI BLink). & (gnl|cdd|31262 : 392.0) no description available & (p25141|adh1_pethy : 359.0) Alcohol dehydrogenase 1 (EC 1.1.1.1) - Petunia hybrida (Petunia) & (reliability: 1024.0) & (original description: Putative adh3, Description = S-(hydroxymethyl)glutathione dehydrogenase, PFAM = PF08240;PF00107)' T '26.11' 'misc.alcohol dehydrogenases' 'niben101scf01658_127644-135677' '(gnl|cdd|35245 : 398.0) no description available & (gnl|cdd|31262 : 329.0) no description available & (p48977|adh_maldo : 286.0) Alcohol dehydrogenase (EC 1.1.1.1) - Malus domestica (Apple) (Malus sylvestris) & (at1g22440 : 280.0) Zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT1G22430.2); Has 32607 Blast hits to 32587 proteins in 3168 species: Archae - 747; Bacteria - 20763; Metazoa - 1197; Fungi - 2370; Plants - 4104; Viruses - 3; Other Eukaryotes - 3423 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative ALDH, Description = Putative alcohol dehydrogenase, PFAM = PF00107;PF08240)' T '26.11' 'misc.alcohol dehydrogenases' 'niben101scf03141_843898-849713' '(at5g42250 : 503.0) Zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT4G22110.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35245 : 446.0) no description available & (p25141|adh1_pethy : 342.0) Alcohol dehydrogenase 1 (EC 1.1.1.1) - Petunia hybrida (Petunia) & (gnl|cdd|31262 : 342.0) no description available & (reliability: 1006.0) & (original description: Putative adh3, Description = S-(hydroxymethyl)glutathione dehydrogenase, PFAM = PF08240;PF00107)' T '26.11' 'misc.alcohol dehydrogenases' 'niben101scf03263_882456-888963' '(at5g43940 : 697.0) Encodes a glutathione-dependent formaldehyde dehydrogenase (also known as class III type alcohol dehydrogenase) reduces S-nitrosoglutathione (GSNO), the condensation product of glutathione and NO, that is a naturally occurring NO reservoir and also a reactive nitrogen intermediate. Gene expression is reduced by wounding and induced by salicylic acid. Is required for the acclimation of plants to high temperature and for fertility.; sensitive to hot temperatures 5 (HOT5); CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase (InterPro:IPR014183), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alcohol dehydrogenase 1 (TAIR:AT1G77120.1). & (p93436|adhx_orysa : 691.0) Alcohol dehydrogenase class 3 (EC 1.1.1.1) (Alcohol dehydrogenase class III) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284) (Glutathione-dependent formaldehyde dehydrogenase) (FDH) (FALDH) (GSH-FDH) - Oryza sativa (Rice) & (gnl|cdd|35245 : 633.0) no description available & (gnl|cdd|31262 : 507.0) no description available & (reliability: 1394.0) & (original description: Putative ADH2, Description = Alcohol dehydrogenase class-3, PFAM = PF08240;PF00107)' T '26.11' 'misc.alcohol dehydrogenases' 'niben101scf04078_135814-142523' '(at5g24760 : 543.0) GroES-like zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alcohol dehydrogenase 1 (TAIR:AT1G77120.1); Has 31909 Blast hits to 31894 proteins in 3124 species: Archae - 749; Bacteria - 20391; Metazoa - 1181; Fungi - 2292; Plants - 4048; Viruses - 0; Other Eukaryotes - 3248 (source: NCBI BLink). & (gnl|cdd|35245 : 488.0) no description available & (p25141|adh1_pethy : 387.0) Alcohol dehydrogenase 1 (EC 1.1.1.1) - Petunia hybrida (Petunia) & (gnl|cdd|31262 : 385.0) no description available & (reliability: 1086.0) & (original description: Putative adh1, Description = S-(hydroxymethyl)glutathione dehydrogenase, PFAM = PF08240;PF00107)' T '26.11' 'misc.alcohol dehydrogenases' 'niben101scf05385_378292-384792' '(at5g42250 : 570.0) Zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT4G22110.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35245 : 525.0) no description available & (p93436|adhx_orysa : 392.0) Alcohol dehydrogenase class 3 (EC 1.1.1.1) (Alcohol dehydrogenase class III) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284) (Glutathione-dependent formaldehyde dehydrogenase) (FDH) (FALDH) (GSH-FDH) - Oryza sativa (Rice) & (gnl|cdd|31262 : 378.0) no description available & (reliability: 1140.0) & (original description: Putative adh3, Description = S-(hydroxymethyl)glutathione dehydrogenase, PFAM = PF00107;PF08240)' T '26.11' 'misc.alcohol dehydrogenases' 'niben101scf05848_372139-378066' '(at1g65560 : 483.0) Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1); Has 16645 Blast hits to 16624 proteins in 1782 species: Archae - 118; Bacteria - 9540; Metazoa - 863; Fungi - 1044; Plants - 588; Viruses - 0; Other Eukaryotes - 4492 (source: NCBI BLink). & (gnl|cdd|36410 : 465.0) no description available & (gnl|cdd|32313 : 361.0) no description available & (reliability: 966.0) & (original description: Putative Sb03g042360, Description = Putative uncharacterized protein Sb03g042360, PFAM = PF16884;PF00107)' T '26.11' 'misc.alcohol dehydrogenases' 'niben101scf07673_94905-107700' '(gnl|cdd|36410 : 289.0) no description available & (gnl|cdd|32313 : 282.0) no description available & (at5g16970 : 207.0) encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls; alkenal reductase (AER); FUNCTIONS IN: 2-alkenal reductase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G17000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative yfmJ, Description = Putative NADP-dependent oxidoreductase YfmJ, PFAM = PF00107;PF16884)' T '26.11' 'misc.alcohol dehydrogenases' 'niben101scf08039_280627-292430' '(gnl|cdd|36410 : 282.0) no description available & (gnl|cdd|32313 : 280.0) no description available & (at5g16970 : 207.0) encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls; alkenal reductase (AER); FUNCTIONS IN: 2-alkenal reductase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G17000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative yfmJ, Description = Putative NADP-dependent oxidoreductase YfmJ, PFAM = PF00107;PF16884)' T '26.11' 'misc.alcohol dehydrogenases' 'niben101scf11319_89467-94802' '(at5g42250 : 572.0) Zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT4G22110.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35245 : 516.0) no description available & (p25141|adh1_pethy : 400.0) Alcohol dehydrogenase 1 (EC 1.1.1.1) - Petunia hybrida (Petunia) & (gnl|cdd|31262 : 394.0) no description available & (reliability: 1144.0) & (original description: Putative adh3, Description = S-(hydroxymethyl)glutathione dehydrogenase, PFAM = PF00107;PF08240)' T '26.11' 'misc.alcohol dehydrogenases' 'niben101scf19980_310-5244' '(at5g43940 : 421.0) Encodes a glutathione-dependent formaldehyde dehydrogenase (also known as class III type alcohol dehydrogenase) reduces S-nitrosoglutathione (GSNO), the condensation product of glutathione and NO, that is a naturally occurring NO reservoir and also a reactive nitrogen intermediate. Gene expression is reduced by wounding and induced by salicylic acid. Is required for the acclimation of plants to high temperature and for fertility.; sensitive to hot temperatures 5 (HOT5); CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase (InterPro:IPR014183), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alcohol dehydrogenase 1 (TAIR:AT1G77120.1). & (p93436|adhx_orysa : 415.0) Alcohol dehydrogenase class 3 (EC 1.1.1.1) (Alcohol dehydrogenase class III) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284) (Glutathione-dependent formaldehyde dehydrogenase) (FDH) (FALDH) (GSH-FDH) - Oryza sativa (Rice) & (gnl|cdd|35245 : 399.0) no description available & (gnl|cdd|31262 : 324.0) no description available & (reliability: 842.0) & (original description: Putative frmA, Description = Glutathione-dependent formaldehyde dehydrogenase, PFAM = PF08240)' T '26.11.1' 'misc.alcohol dehydrogenases.cinnamyl alcohol dehydrogenase' 'nbv0.3scaffold14384_32574-38965' '(gnl|cdd|36715 : 224.0) no description available & (p14720|dfra_pethy : 178.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Petunia hybrida (Petunia) & (at4g27250 : 164.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: cinnamyl-alcohol dehydrogenase activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: dihydroflavonol 4-reductase (TAIR:AT5G42800.1). & (gnl|cdd|30800 : 85.4) no description available & (reliability: 304.0) & (original description: Putative hm2, Description = NADPH HC toxin reductase, PFAM = PF01370)' T '26.11.1' 'misc.alcohol dehydrogenases.cinnamyl alcohol dehydrogenase' 'nbv0.5scaffold106_703415-719646' '(gnl|cdd|36715 : 380.0) no description available & (at5g19440 : 369.0) similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase; NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: alcohol dehydrogenase (NAD) activity; INVOLVED IN: response to salt stress; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G51410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p51104|dfra_diaca : 211.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|30800 : 116.0) no description available & (reliability: 738.0) & (original description: Putative ADH, Description = Putative alcohol dehydrogenase, PFAM = PF01370)' T '26.11.1' 'misc.alcohol dehydrogenases.cinnamyl alcohol dehydrogenase' 'nbv0.5scaffold1689_31201-42946' '(at5g19440 : 488.0) similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase; NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: alcohol dehydrogenase (NAD) activity; INVOLVED IN: response to salt stress; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G51410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36715 : 409.0) no description available & (p51104|dfra_diaca : 236.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|30800 : 113.0) no description available & (reliability: 976.0) & (original description: Putative cad2, Description = Cinnamoyl alcohol dehydrogenase, PFAM = PF01370)' T '26.11.1' 'misc.alcohol dehydrogenases.cinnamyl alcohol dehydrogenase' 'niben101scf00327_17454-21041' '(at1g51410 : 142.0) similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase; NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: alcohol dehydrogenase (NAD) activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G19440.1); Has 8402 Blast hits to 8385 proteins in 1446 species: Archae - 75; Bacteria - 2860; Metazoa - 268; Fungi - 933; Plants - 2492; Viruses - 10; Other Eukaryotes - 1764 (source: NCBI BLink). & (gnl|cdd|36715 : 106.0) no description available & (reliability: 284.0) & (original description: Putative cad, Description = Cinnamyl alcohol dehydrogenase, PFAM = )' T '26.11.1' 'misc.alcohol dehydrogenases.cinnamyl alcohol dehydrogenase' 'niben101scf03253_3297-25079' '(at1g66800 : 102.0) similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase; NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: alcohol dehydrogenase (NAD) activity, cinnamyl-alcohol dehydrogenase activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, hypocotyl, root, pollen tube; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1); Has 12055 Blast hits to 12042 proteins in 2029 species: Archae - 224; Bacteria - 5367; Metazoa - 406; Fungi - 979; Plants - 2431; Viruses - 61; Other Eukaryotes - 2587 (source: NCBI BLink). & (gnl|cdd|36715 : 89.2) no description available & (reliability: 204.0) & (original description: Putative cad, Description = Cinnamyl alcohol dehydrogenase, PFAM = )' T '26.11.1' 'misc.alcohol dehydrogenases.cinnamyl alcohol dehydrogenase' 'niben101scf04869_495436-507499' '(at1g51410 : 507.0) similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase; NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: alcohol dehydrogenase (NAD) activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G19440.1); Has 8402 Blast hits to 8385 proteins in 1446 species: Archae - 75; Bacteria - 2860; Metazoa - 268; Fungi - 933; Plants - 2492; Viruses - 10; Other Eukaryotes - 1764 (source: NCBI BLink). & (gnl|cdd|36715 : 425.0) no description available & (p51104|dfra_diaca : 251.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|30800 : 126.0) no description available & (reliability: 1014.0) & (original description: Putative cad2, Description = Cinnamoyl alcohol dehydrogenase, PFAM = PF01370)' T '26.12' 'misc.peroxidases' 'nbv0.3scaffold6210_1674-6392' '(gnl|cdd|29388 : 419.0) no description available & (at3g01190 : 412.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G15180.1); Has 4151 Blast hits to 4125 proteins in 211 species: Archae - 0; Bacteria - 4; Metazoa - 8; Fungi - 32; Plants - 4087; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (p37834|per1_orysa : 335.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 824.0) & (original description: Putative POD1, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'nbv0.3scaffold9821_41490-45098' '(at1g44970 : 471.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4592 Blast hits to 4563 proteins in 305 species: Archae - 0; Bacteria - 10; Metazoa - 5; Fungi - 193; Plants - 4307; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|29388 : 464.0) no description available & (p22195|per1_arahy : 323.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 942.0) & (original description: Putative PER9, Description = Peroxidase 9, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'nbv0.3scaffold17442_2174-7341' '(at1g68850 : 463.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G36430.1); Has 4434 Blast hits to 4410 proteins in 271 species: Archae - 0; Bacteria - 4; Metazoa - 19; Fungi - 149; Plants - 4210; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|29388 : 408.0) no description available & (p22195|per1_arahy : 262.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 926.0) & (original description: Putative PER11, Description = Peroxidase 11, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'nbv0.3scaffold18206_9193-21529' '(gnl|cdd|29388 : 266.0) no description available & (at5g17820 : 182.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: root, leaf; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G03670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p22196|per2_arahy : 177.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 364.0) & (original description: Putative prx34, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'nbv0.3scaffold27514_24292-26937' '(gnl|cdd|29388 : 423.0) no description available & (p22195|per1_arahy : 352.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g58400 : 329.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 658.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'nbv0.3scaffold29570_219-2960' '(gnl|cdd|29388 : 188.0) no description available & (at4g33870 : 129.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G41480.1); Has 3863 Blast hits to 3848 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 67; Plants - 3768; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (p22196|per2_arahy : 105.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 258.0) & (original description: Putative prx18, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'nbv0.3scaffold33168_2763-8828' '(gnl|cdd|29388 : 372.0) no description available & (at5g22410 : 309.0) root hair specific 18 (RHS18); FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root hair, root, synergid; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G17820.1); Has 3762 Blast hits to 3747 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 14; Plants - 3739; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (p22196|per2_arahy : 261.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 618.0) & (original description: Putative PER60, Description = Peroxidase 60, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'nbv0.3scaffold41761_5047-9442' '(gnl|cdd|29388 : 460.0) no description available & (at5g06720 : 372.0) peroxidase 2 (PA2); FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G06730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p11965|perx_tobac : 340.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) (TOPA) - Nicotiana tabacum (Common tobacco) & (reliability: 744.0) & (original description: Putative pod, Description = Peroxidase 15, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'nbv0.3scaffold46761_7900-11324' '(at5g51890 : 457.0) encodes peroxidase involved in the lignification of tracheary elements (TE) in roots; Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G42180.1); Has 4522 Blast hits to 4498 proteins in 281 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 153; Plants - 4313; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (gnl|cdd|29388 : 404.0) no description available & (p37834|per1_orysa : 238.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 914.0) & (original description: Putative PER66, Description = Peroxidase 66, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'nbv0.3scaffold51919_1-3500' '(gnl|cdd|29388 : 216.0) no description available & (at4g33870 : 142.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G41480.1); Has 3863 Blast hits to 3848 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 67; Plants - 3768; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (p37834|per1_orysa : 115.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 284.0) & (original description: Putative prx18, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'nbv0.3scaffold54984_9810-13453' '(at4g25980 : 447.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, embryo, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G77100.1); Has 4310 Blast hits to 4291 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 82; Plants - 4190; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|29388 : 378.0) no description available & (p22196|per2_arahy : 306.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 894.0) & (original description: Putative pod5, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'nbv0.3scaffold77959_5950-7569' '(at1g05260 : 224.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 189.0) no description available & (p37834|per1_orysa : 176.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 426.0) & (original description: Putative pa9, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'nbv0.3scaffold91781_1-4784' '(p12437|perx_soltu : 449.0) Suberization-associated anionic peroxidase precursor (EC 1.11.1.7) (POPA) - Solanum tuberosum (Potato) & (gnl|cdd|29388 : 350.0) no description available & (at5g05340 : 204.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'nbv0.3scaffold108878_536-3057' '(gnl|cdd|29388 : 129.0) no description available & (at4g11290 : 105.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p37834|per1_orysa : 98.6) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 210.0) & (original description: Putative prx18, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'nbv0.5scaffold138_318934-323187' '(gnl|cdd|29388 : 346.0) no description available & (at4g33870 : 311.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G41480.1); Has 3863 Blast hits to 3848 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 67; Plants - 3768; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (p22196|per2_arahy : 221.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 622.0) & (original description: Putative PER48, Description = Putative Peroxidase 48, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'nbv0.5scaffold897_391847-395440' '(gnl|cdd|29388 : 400.0) no description available & (at2g39040 : 363.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05260.1); Has 3980 Blast hits to 3955 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 3923; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (p37834|per1_orysa : 271.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 726.0) & (original description: Putative PER24, Description = Peroxidase 24, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'nbv0.5scaffold900_446030-449840' '(at1g71695 : 419.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: cell wall, vacuole, membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4523 Blast hits to 4498 proteins in 279 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 207; Plants - 4264; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (gnl|cdd|29388 : 385.0) no description available & (p22195|per1_arahy : 230.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 838.0) & (original description: Putative prx2, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'nbv0.5scaffold1421_110696-114654' '(gnl|cdd|29388 : 283.0) no description available & (at4g25980 : 280.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, embryo, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G77100.1); Has 4310 Blast hits to 4291 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 82; Plants - 4190; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (p22196|per2_arahy : 212.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 560.0) & (original description: Putative pod5, Description = Peroxidase, PFAM = PF00141;PF00141)' T '26.12' 'misc.peroxidases' 'nbv0.5scaffold2239_194199-196880' '(at5g05340 : 177.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29388 : 177.0) no description available & (p00434|perp7_brara : 169.0) Peroxidase P7 (EC 1.11.1.7) (TP7) - Brassica rapa (Turnip) & (reliability: 354.0) & (original description: Putative px12, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'nbv0.5scaffold2646_62577-68015' '(at5g42180 : 417.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G51890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29388 : 401.0) no description available & (p37834|per1_orysa : 256.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 834.0) & (original description: Putative PER64, Description = Peroxidase 64, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'nbv0.5scaffold3031_237911-241947' '(at2g41480 : 356.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; EXPRESSED IN: root, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G64120.1); Has 4041 Blast hits to 4016 proteins in 197 species: Archae - 0; Bacteria - 4; Metazoa - 16; Fungi - 31; Plants - 3957; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|29388 : 315.0) no description available & (p22196|per2_arahy : 305.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 712.0) & (original description: Putative PER25, Description = Peroxidase 25, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'nbv0.5scaffold3281_135575-140616' '(gnl|cdd|29388 : 421.0) no description available & (p22195|per1_arahy : 359.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g58400 : 331.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 662.0) & (original description: Putative prx1, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'nbv0.5scaffold4724_89933-93624' '(at1g71695 : 431.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: cell wall, vacuole, membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4523 Blast hits to 4498 proteins in 279 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 207; Plants - 4264; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (gnl|cdd|29388 : 405.0) no description available & (p37834|per1_orysa : 236.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 862.0) & (original description: Putative PER12, Description = Peroxidase 12, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'nbv0.5scaffold8901_8169-13170' '(at1g44970 : 469.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4592 Blast hits to 4563 proteins in 305 species: Archae - 0; Bacteria - 10; Metazoa - 5; Fungi - 193; Plants - 4307; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|29388 : 438.0) no description available & (p22195|per1_arahy : 299.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 938.0) & (original description: Putative PER9, Description = Peroxidase 9, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben044scf00001827ctg010_4979-8471' '(at5g51890 : 448.0) encodes peroxidase involved in the lignification of tracheary elements (TE) in roots; Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G42180.1); Has 4522 Blast hits to 4498 proteins in 281 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 153; Plants - 4313; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (gnl|cdd|29388 : 404.0) no description available & (p37834|per1_orysa : 236.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 896.0) & (original description: Putative PER66, Description = Peroxidase 66, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben044scf00002096ctg005_54504-57988' '(at5g66390 : 475.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G50990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29388 : 460.0) no description available & (p11965|perx_tobac : 283.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) (TOPA) - Nicotiana tabacum (Common tobacco) & (reliability: 950.0) & (original description: Putative PER72, Description = Peroxidase 72, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben044scf00010265ctg020_28484-32510' '(at1g71695 : 430.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: cell wall, vacuole, membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4523 Blast hits to 4498 proteins in 279 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 207; Plants - 4264; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (gnl|cdd|29388 : 396.0) no description available & (p22195|per1_arahy : 238.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 860.0) & (original description: Putative prx2, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben044scf00011992ctg000_2882-6262' '(gnl|cdd|29388 : 414.0) no description available & (at3g03670 : 248.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G17820.1); Has 4234 Blast hits to 4201 proteins in 214 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 58; Plants - 4144; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (p22196|per2_arahy : 245.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 496.0) & (original description: Putative prx6, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben044scf00018141ctg012_1-2555' '(at4g25980 : 238.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, embryo, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G77100.1); Has 4310 Blast hits to 4291 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 82; Plants - 4190; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|29388 : 204.0) no description available & (p22196|per2_arahy : 160.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 476.0) & (original description: Putative pod5, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben044scf00024562ctg004_20041-23897' '(at1g05260 : 428.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 421.0) no description available & (p37834|per1_orysa : 333.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 802.0) & (original description: Putative pb7, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben044scf00030439ctg000_1730-5332' '(at4g21960 : 547.0) Encodes AT4g21960 (AT4g21960/T8O5_170).; PRXR1; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G37130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29388 : 362.0) no description available & (p00434|perp7_brara : 189.0) Peroxidase P7 (EC 1.11.1.7) (TP7) - Brassica rapa (Turnip) & (reliability: 1094.0) & (original description: Putative prx, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben044scf00032616ctg002_1200-4693' '(gnl|cdd|29388 : 135.0) no description available & (at4g33870 : 109.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G41480.1); Has 3863 Blast hits to 3848 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 67; Plants - 3768; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (p37834|per1_orysa : 105.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 218.0) & (original description: Putative prx18, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben044scf00032698ctg001_13408-15976' '(at5g67400 : 452.0) root hair specific 19 (RHS19); FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root hair, root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G49960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29388 : 392.0) no description available & (p37834|per1_orysa : 232.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 904.0) & (original description: Putative prx2, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben044scf00034984ctg012_6366-9220' '(gnl|cdd|29388 : 237.0) no description available & (at2g39040 : 200.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05260.1); Has 3980 Blast hits to 3955 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 3923; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (p22196|per2_arahy : 162.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 400.0) & (original description: Putative pa9, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben044scf00037141ctg001_18787-22968' '(gnl|cdd|29388 : 330.0) no description available & (at4g11290 : 232.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p22196|per2_arahy : 222.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 464.0) & (original description: Putative PER2, Description = Peroxidase 2, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101ctg12711_1-1633' '(gnl|cdd|29388 : 391.0) no description available & (p22195|per1_arahy : 258.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at1g44970 : 253.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4592 Blast hits to 4563 proteins in 305 species: Archae - 0; Bacteria - 10; Metazoa - 5; Fungi - 193; Plants - 4307; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative PER1, Description = Peroxidase 1, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf00308_61291-65015' '(gnl|cdd|29388 : 414.0) no description available & (at3g21770 : 275.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: cell wall, nucleus, plant-type cell wall, cytoplasm; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05260.1); Has 4451 Blast hits to 4425 proteins in 278 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 123; Plants - 4268; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (p37834|per1_orysa : 265.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 550.0) & (original description: Putative pb7, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf00402_558590-561894' '(gnl|cdd|29388 : 414.0) no description available & (at3g03670 : 254.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G17820.1); Has 4234 Blast hits to 4201 proteins in 214 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 58; Plants - 4144; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (p22195|per1_arahy : 251.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 508.0) & (original description: Putative PER2, Description = Peroxidase 2, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf00416_123850-127394' '(gnl|cdd|29388 : 405.0) no description available & (p22196|per2_arahy : 261.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (at5g51890 : 259.0) encodes peroxidase involved in the lignification of tracheary elements (TE) in roots; Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G42180.1); Has 4522 Blast hits to 4498 proteins in 281 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 153; Plants - 4313; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (reliability: 518.0) & (original description: Putative POD, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf00638_159106-167261' '(at4g32320 : 366.0) Encodes a cytosolic ascorbate peroxidase APX6. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.; ascorbate peroxidase 6 (APX6); FUNCTIONS IN: L-ascorbate peroxidase activity, peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 2 (TAIR:AT3G09640.2); Has 8064 Blast hits to 8032 proteins in 1269 species: Archae - 53; Bacteria - 2233; Metazoa - 2; Fungi - 806; Plants - 4037; Viruses - 0; Other Eukaryotes - 933 (source: NCBI BLink). & (gnl|cdd|29386 : 183.0) no description available & (p93404|apx1_orysa : 150.0) L-ascorbate peroxidase 1, cytosolic (EC 1.11.1.11) (APXa) (OsAPx01) - Oryza sativa (Rice) & (reliability: 732.0) & (original description: Putative apx2, Description = L-ascorbate peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf00646_1080330-1084598' '(at4g25980 : 417.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, embryo, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G77100.1); Has 4310 Blast hits to 4291 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 82; Plants - 4190; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|29388 : 374.0) no description available & (p22196|per2_arahy : 275.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 834.0) & (original description: Putative pod5, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf00679_491038-495110' '(gnl|cdd|29388 : 419.0) no description available & (at3g01190 : 404.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G15180.1); Has 4151 Blast hits to 4125 proteins in 211 species: Archae - 0; Bacteria - 4; Metazoa - 8; Fungi - 32; Plants - 4087; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (p37834|per1_orysa : 338.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 808.0) & (original description: Putative PER27, Description = Peroxidase 27, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf00709_242362-246078' '(at4g37530 : 452.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G37520.1); Has 4481 Blast hits to 4468 proteins in 296 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 180; Plants - 4223; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (gnl|cdd|29388 : 396.0) no description available & (p37834|per1_orysa : 236.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 904.0) & (original description: Putative prx2, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf00751_55575-60165' '(at4g33420 : 442.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G51890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29388 : 398.0) no description available & (p22196|per2_arahy : 276.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 884.0) & (original description: Putative PER47, Description = Peroxidase 47, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf00851_24457-30985' '(gnl|cdd|29388 : 370.0) no description available & (at5g22410 : 303.0) root hair specific 18 (RHS18); FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root hair, root, synergid; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G17820.1); Has 3762 Blast hits to 3747 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 14; Plants - 3739; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (p22196|per2_arahy : 255.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 606.0) & (original description: Putative PER60, Description = Peroxidase 60, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf01037_281173-284764' '(at1g05260 : 433.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 415.0) no description available & (p37834|per1_orysa : 322.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 824.0) & (original description: Putative pb7, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf01208_286261-290216' '(gnl|cdd|29388 : 355.0) no description available & (at4g26010 : 335.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G34510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p22196|per2_arahy : 233.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 670.0) & (original description: Putative PER44, Description = Peroxidase 44, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf01212_224580-229252' '(at2g34060 : 439.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: root hair specific 19 (TAIR:AT5G67400.1); Has 4452 Blast hits to 4430 proteins in 281 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 117; Plants - 4266; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|29388 : 386.0) no description available & (p22196|per2_arahy : 235.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 878.0) & (original description: Putative PER19, Description = Peroxidase 19, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf01230_250993-254852' '(gnl|cdd|29388 : 353.0) no description available & (at3g03670 : 235.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G17820.1); Has 4234 Blast hits to 4201 proteins in 214 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 58; Plants - 4144; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (p22196|per2_arahy : 227.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 470.0) & (original description: Putative px1, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf01237_1162725-1167652' '(gnl|cdd|29388 : 444.0) no description available & (at5g05340 : 400.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p00434|perp7_brara : 381.0) Peroxidase P7 (EC 1.11.1.7) (TP7) - Brassica rapa (Turnip) & (reliability: 800.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf01237_1165263-1167937' '(gnl|cdd|29388 : 176.0) no description available & (at5g05340 : 165.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p00434|perp7_brara : 159.0) Peroxidase P7 (EC 1.11.1.7) (TP7) - Brassica rapa (Turnip) & (reliability: 330.0) & (original description: Putative px12, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf01290_100093-105952' '(gnl|cdd|29388 : 428.0) no description available & (p22195|per1_arahy : 409.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g05340 : 346.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 692.0) & (original description: Putative PNC1, Description = Cationic peroxidase 1, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf01374_93484-97796' '(gnl|cdd|29388 : 314.0) no description available & (at3g17070 : 254.0) Peroxidase family protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G40150.1); Has 4731 Blast hits to 4708 proteins in 320 species: Archae - 0; Bacteria - 4; Metazoa - 13; Fungi - 403; Plants - 4233; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (p37834|per1_orysa : 187.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 508.0) & (original description: Putative PER29, Description = Peroxidase 29, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf01380_301847-312064' '(gnl|cdd|29388 : 311.0) no description available & (at4g33870 : 218.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G41480.1); Has 3863 Blast hits to 3848 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 67; Plants - 3768; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (p22195|per1_arahy : 186.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 436.0) & (original description: Putative prx18, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf01453_622259-627525' '(at1g71695 : 439.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: cell wall, vacuole, membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4523 Blast hits to 4498 proteins in 279 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 207; Plants - 4264; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (gnl|cdd|29388 : 416.0) no description available & (p22195|per1_arahy : 244.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 878.0) & (original description: Putative prx2, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf01466_90226-94462' '(at2g22420 : 504.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G19890.1); Has 4727 Blast hits to 4701 proteins in 310 species: Archae - 0; Bacteria - 4; Metazoa - 10; Fungi - 328; Plants - 4313; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (gnl|cdd|29388 : 412.0) no description available & (p11965|perx_tobac : 251.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) (TOPA) - Nicotiana tabacum (Common tobacco) & (reliability: 1008.0) & (original description: Putative PER17, Description = Peroxidase 17, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf01494_929590-932702' '(gnl|cdd|29388 : 381.0) no description available & (at1g24110 : 371.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G47000.1); Has 4783 Blast hits to 4756 proteins in 324 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 401; Plants - 4296; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (p22196|per2_arahy : 211.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 742.0) & (original description: Putative PER6, Description = Peroxidase 6, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf01676_41923-45553' '(at5g66390 : 484.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G50990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29388 : 460.0) no description available & (p11965|perx_tobac : 282.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) (TOPA) - Nicotiana tabacum (Common tobacco) & (reliability: 968.0) & (original description: Putative PER72, Description = Peroxidase 72, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf01676_46439-50382' '(at5g66390 : 464.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G50990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29388 : 463.0) no description available & (p11965|perx_tobac : 286.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) (TOPA) - Nicotiana tabacum (Common tobacco) & (reliability: 928.0) & (original description: Putative PER9, Description = Peroxidase 9, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf01702_118374-122132' '(at5g42180 : 465.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G51890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29388 : 396.0) no description available & (p37834|per1_orysa : 271.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 930.0) & (original description: Putative PER64, Description = Peroxidase 64, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf01720_50338-54659' '(gnl|cdd|29388 : 432.0) no description available & (at3g01190 : 407.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G15180.1); Has 4151 Blast hits to 4125 proteins in 211 species: Archae - 0; Bacteria - 4; Metazoa - 8; Fungi - 32; Plants - 4087; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (p37834|per1_orysa : 368.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 814.0) & (original description: Putative pa9, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf01721_753164-758890' '(at2g24800 : 409.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sperm cell, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G31760.1); Has 4841 Blast hits to 4814 proteins in 324 species: Archae - 0; Bacteria - 4; Metazoa - 10; Fungi - 415; Plants - 4336; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|29388 : 380.0) no description available & (p22196|per2_arahy : 233.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 818.0) & (original description: Putative PER46, Description = Peroxidase 46, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf01916_112836-119293' '(at1g68850 : 463.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G36430.1); Has 4434 Blast hits to 4410 proteins in 271 species: Archae - 0; Bacteria - 4; Metazoa - 19; Fungi - 149; Plants - 4210; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|29388 : 409.0) no description available & (p22195|per1_arahy : 263.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 926.0) & (original description: Putative PER11, Description = Peroxidase 11, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf01920_1-4291' '(gnl|cdd|29388 : 376.0) no description available & (at1g44970 : 260.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4592 Blast hits to 4563 proteins in 305 species: Archae - 0; Bacteria - 10; Metazoa - 5; Fungi - 193; Plants - 4307; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (p22196|per2_arahy : 255.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 520.0) & (original description: Putative prx6, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf01920_14036-17426' '(gnl|cdd|29388 : 386.0) no description available & (at1g44970 : 266.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4592 Blast hits to 4563 proteins in 305 species: Archae - 0; Bacteria - 10; Metazoa - 5; Fungi - 193; Plants - 4307; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (p22196|per2_arahy : 256.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 532.0) & (original description: Putative prx6, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf02298_130309-135101' '(gnl|cdd|29388 : 421.0) no description available & (at3g01190 : 415.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G15180.1); Has 4151 Blast hits to 4125 proteins in 211 species: Archae - 0; Bacteria - 4; Metazoa - 8; Fungi - 32; Plants - 4087; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (p37834|per1_orysa : 335.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 830.0) & (original description: Putative pa9, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf02349_186131-191150' '(p12437|perx_soltu : 435.0) Suberization-associated anionic peroxidase precursor (EC 1.11.1.7) (POPA) - Solanum tuberosum (Potato) & (gnl|cdd|29388 : 351.0) no description available & (at5g05340 : 201.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf02349_332677-337589' '(p12437|perx_soltu : 439.0) Suberization-associated anionic peroxidase precursor (EC 1.11.1.7) (POPA) - Solanum tuberosum (Potato) & (gnl|cdd|29388 : 350.0) no description available & (at5g05340 : 207.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative TAP1, Description = Suberization-associated anionic peroxidase 1, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf02349_384823-388482' '(p12437|perx_soltu : 414.0) Suberization-associated anionic peroxidase precursor (EC 1.11.1.7) (POPA) - Solanum tuberosum (Potato) & (gnl|cdd|29388 : 353.0) no description available & (at5g05340 : 189.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative TAP1, Description = Suberization-associated anionic peroxidase 1, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf02709_107368-111022' '(gnl|cdd|29388 : 411.0) no description available & (at2g39040 : 337.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05260.1); Has 3980 Blast hits to 3955 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 3923; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (p37834|per1_orysa : 257.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 674.0) & (original description: Putative PER24, Description = Peroxidase 24, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf02818_133400-137533' '(gnl|cdd|29388 : 169.0) no description available & (at2g39040 : 159.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05260.1); Has 3980 Blast hits to 3955 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 3923; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (p37834|per1_orysa : 108.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 318.0) & (original description: Putative pa9, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf02864_270063-274268' '(gnl|cdd|29388 : 460.0) no description available & (at5g66390 : 441.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G50990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p37835|per2_orysa : 254.0) Peroxidase 2 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 882.0) & (original description: Putative PER72, Description = Peroxidase 72, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf02968_675414-678213' '(at1g05260 : 179.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 168.0) no description available & (p37834|per1_orysa : 137.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 344.0) & (original description: Putative pb7, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf03300_207374-211237' '(gnl|cdd|29388 : 439.0) no description available & (at1g49570 : 423.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: leaf lamina base, leaf whorl, hypocotyl, sepal, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G06730.1); Has 4743 Blast hits to 4717 proteins in 317 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 358; Plants - 4305; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (p00434|perp7_brara : 306.0) Peroxidase P7 (EC 1.11.1.7) (TP7) - Brassica rapa (Turnip) & (reliability: 846.0) & (original description: Putative PER10, Description = Peroxidase 10, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf03460_390279-395137' '(p11965|perx_tobac : 590.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) (TOPA) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29388 : 437.0) no description available & (at5g06720 : 398.0) peroxidase 2 (PA2); FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G06730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 796.0) & (original description: Putative aprx, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf03790_143080-146765' '(gnl|cdd|29388 : 393.0) no description available & (at5g17820 : 315.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: root, leaf; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G03670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p22196|per2_arahy : 229.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 630.0) & (original description: Putative PER57, Description = Peroxidase 57, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf03927_289457-292693' '(gnl|cdd|29388 : 422.0) no description available & (p22195|per1_arahy : 335.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g05340 : 311.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 622.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf03947_26841-30371' '(at5g42180 : 391.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G51890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29388 : 390.0) no description available & (p22196|per2_arahy : 256.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 782.0) & (original description: Putative pb7, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf03990_52730-58655' '(at2g37130 : 480.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: defense response to fungus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G21960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29388 : 359.0) no description available & (p00434|perp7_brara : 193.0) Peroxidase P7 (EC 1.11.1.7) (TP7) - Brassica rapa (Turnip) & (reliability: 960.0) & (original description: Putative pa8, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf04060_276805-280179' '(at5g42180 : 405.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G51890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29388 : 400.0) no description available & (p37834|per1_orysa : 254.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 810.0) & (original description: Putative PER64, Description = Peroxidase 64, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf04069_35554-39151' '(gnl|cdd|29388 : 364.0) no description available & (at4g26010 : 332.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G34510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p22196|per2_arahy : 232.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (gnl|cdd|37135 : 89.7) no description available & (reliability: 664.0) & (original description: Putative PER44, Description = Peroxidase 44, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf04220_262344-266828' '(gnl|cdd|29388 : 431.0) no description available & (at3g01190 : 409.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G15180.1); Has 4151 Blast hits to 4125 proteins in 211 species: Archae - 0; Bacteria - 4; Metazoa - 8; Fungi - 32; Plants - 4087; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (p37834|per1_orysa : 368.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 818.0) & (original description: Putative pa9, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf04220_329346-332809' '(at1g05260 : 418.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 412.0) no description available & (p37834|per1_orysa : 331.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 790.0) & (original description: Putative pb7, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf04220_435980-439250' '(gnl|cdd|29388 : 426.0) no description available & (at3g01190 : 410.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G15180.1); Has 4151 Blast hits to 4125 proteins in 211 species: Archae - 0; Bacteria - 4; Metazoa - 8; Fungi - 32; Plants - 4087; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (p37834|per1_orysa : 350.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 820.0) & (original description: Putative PER1, Description = Peroxidase 1, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf04627_553324-560321' '(at2g41480 : 451.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; EXPRESSED IN: root, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G64120.1); Has 4041 Blast hits to 4016 proteins in 197 species: Archae - 0; Bacteria - 4; Metazoa - 16; Fungi - 31; Plants - 3957; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|29388 : 404.0) no description available & (p22196|per2_arahy : 400.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 902.0) & (original description: Putative PER25, Description = Peroxidase 25, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf05407_340820-344974' '(gnl|cdd|29388 : 385.0) no description available & (at4g26010 : 348.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G34510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p22196|per2_arahy : 254.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 696.0) & (original description: Putative PER44, Description = Peroxidase 44, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf05541_171350-175118' '(gnl|cdd|29388 : 375.0) no description available & (at1g30870 : 345.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G49570.1); Has 4658 Blast hits to 4636 proteins in 311 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 376; Plants - 4203; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (p22196|per2_arahy : 229.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 690.0) & (original description: Putative PER7, Description = Peroxidase 7, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf05566_472450-478250' '(at2g22420 : 504.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G19890.1); Has 4727 Blast hits to 4701 proteins in 310 species: Archae - 0; Bacteria - 4; Metazoa - 10; Fungi - 328; Plants - 4313; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (gnl|cdd|29388 : 417.0) no description available & (p22195|per1_arahy : 254.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 1008.0) & (original description: Putative PER17, Description = Peroxidase 17, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf05649_126495-131329' '(at4g33420 : 273.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G51890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29388 : 252.0) no description available & (p22196|per2_arahy : 188.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 546.0) & (original description: Putative PrxFl1, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf05764_217370-221084' '(at5g66390 : 478.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G50990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29388 : 460.0) no description available & (p22195|per1_arahy : 296.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 956.0) & (original description: Putative PER72, Description = Peroxidase 72, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf06277_329389-332861' '(gnl|cdd|29388 : 448.0) no description available & (at1g49570 : 403.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: leaf lamina base, leaf whorl, hypocotyl, sepal, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G06730.1); Has 4743 Blast hits to 4717 proteins in 317 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 358; Plants - 4305; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (q02200|perx_nicsy : 308.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) - Nicotiana sylvestris (Wood tobacco) & (reliability: 806.0) & (original description: Putative PER10, Description = Peroxidase 10, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf06280_673656-676642' '(at5g40150 : 407.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G28200.1); Has 4869 Blast hits to 4842 proteins in 335 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 470; Plants - 4311; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|29388 : 392.0) no description available & (p22196|per2_arahy : 219.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 814.0) & (original description: Putative prx2, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf06397_333159-336715' '(at2g37130 : 175.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: defense response to fungus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G21960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29388 : 150.0) no description available & (p37834|per1_orysa : 100.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 350.0) & (original description: Putative pa8, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf06439_48509-55636' '(at5g24070 : 365.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G43480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29388 : 315.0) no description available & (p22196|per2_arahy : 195.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 730.0) & (original description: Putative PER61, Description = Probable peroxidase 61, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf06602_52476-55975' '(at1g05260 : 460.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 416.0) no description available & (p37834|per1_orysa : 349.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 874.0) & (original description: Putative pb7, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf06686_46243-49851' '(at1g44970 : 469.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4592 Blast hits to 4563 proteins in 305 species: Archae - 0; Bacteria - 10; Metazoa - 5; Fungi - 193; Plants - 4307; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|29388 : 463.0) no description available & (p22195|per1_arahy : 323.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 938.0) & (original description: Putative prx5, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf06778_686124-690957' '(gnl|cdd|29388 : 398.0) no description available & (at2g18980 : 389.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase family protein (TAIR:AT4G30170.1); Has 4579 Blast hits to 4551 proteins in 298 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 207; Plants - 4299; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (p37834|per1_orysa : 243.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 778.0) & (original description: Putative prx2, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf07182_585304-620582' '(gnl|cdd|29388 : 439.0) no description available & (at5g19890 : 395.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G06730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p11965|perx_tobac : 308.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) (TOPA) - Nicotiana tabacum (Common tobacco) & (reliability: 790.0) & (original description: Putative HRPN, Description = Peroxidase N, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf07388_53558-56999' '(at1g05260 : 431.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 418.0) no description available & (p37834|per1_orysa : 334.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 824.0) & (original description: Putative PER30, Description = Peroxidase 30, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf07693_10181-14673' '(gnl|cdd|29388 : 439.0) no description available & (p22195|per1_arahy : 418.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g05340 : 360.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 720.0) & (original description: Putative PNC1, Description = Cationic peroxidase 1, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf08338_28705-32837' '(at4g21960 : 547.0) Encodes AT4g21960 (AT4g21960/T8O5_170).; PRXR1; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G37130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29388 : 362.0) no description available & (p00434|perp7_brara : 189.0) Peroxidase P7 (EC 1.11.1.7) (TP7) - Brassica rapa (Turnip) & (reliability: 1094.0) & (original description: Putative prx, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf08519_172009-175829' '(gnl|cdd|29388 : 433.0) no description available & (q02200|perx_nicsy : 432.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) - Nicotiana sylvestris (Wood tobacco) & (at1g14550 : 372.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G14540.1); Has 4724 Blast hits to 4696 proteins in 306 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 328; Plants - 4308; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 694.0) & (original description: Putative prx1, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf08566_808693-812306' '(p22196|per2_arahy : 456.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (gnl|cdd|29388 : 410.0) no description available & (at2g41480 : 399.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; EXPRESSED IN: root, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G64120.1); Has 4041 Blast hits to 4016 proteins in 197 species: Archae - 0; Bacteria - 4; Metazoa - 16; Fungi - 31; Plants - 3957; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 798.0) & (original description: Putative poxN1, Description = Peroxidase N1, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf08566_831424-835184' '(p22196|per2_arahy : 464.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (gnl|cdd|29388 : 419.0) no description available & (at2g41480 : 411.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; EXPRESSED IN: root, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G64120.1); Has 4041 Blast hits to 4016 proteins in 197 species: Archae - 0; Bacteria - 4; Metazoa - 16; Fungi - 31; Plants - 3957; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 822.0) & (original description: Putative poxN1, Description = Peroxidase N1, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf08670_66697-71804' '(at2g34060 : 441.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: root hair specific 19 (TAIR:AT5G67400.1); Has 4452 Blast hits to 4430 proteins in 281 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 117; Plants - 4266; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|29388 : 395.0) no description available & (p22196|per2_arahy : 240.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 882.0) & (original description: Putative PER19, Description = Peroxidase 19, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf09082_20390-26831' '(gnl|cdd|29388 : 446.0) no description available & (at5g05340 : 373.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p00434|perp7_brara : 366.0) Peroxidase P7 (EC 1.11.1.7) (TP7) - Brassica rapa (Turnip) & (reliability: 746.0) & (original description: Putative PER52, Description = Peroxidase 52, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf09141_52496-55000' '(gnl|cdd|29388 : 171.0) no description available & (p22195|per1_arahy : 151.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g58400 : 147.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf09248_342668-346362' '(gnl|cdd|29388 : 421.0) no description available & (p22195|per1_arahy : 336.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g05340 : 312.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 624.0) & (original description: Putative rip1, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf09548_144374-147357' '(at5g40150 : 425.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G28200.1); Has 4869 Blast hits to 4842 proteins in 335 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 470; Plants - 4311; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|29388 : 384.0) no description available & (p22196|per2_arahy : 219.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 850.0) & (original description: Putative PER63, Description = Peroxidase 63, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf10158_141582-176554' '(at4g17690 : 357.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G47000.1); Has 4832 Blast hits to 4807 proteins in 324 species: Archae - 0; Bacteria - 6; Metazoa - 12; Fungi - 404; Plants - 4331; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (gnl|cdd|29388 : 351.0) no description available & (p22196|per2_arahy : 216.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 714.0) & (original description: Putative prx2, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf10158_175308-178270' '(at4g17690 : 357.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G47000.1); Has 4832 Blast hits to 4807 proteins in 324 species: Archae - 0; Bacteria - 6; Metazoa - 12; Fungi - 404; Plants - 4331; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (gnl|cdd|29388 : 349.0) no description available & (p22196|per2_arahy : 216.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 714.0) & (original description: Putative prx2, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf10162_181972-186153' '(gnl|cdd|29388 : 326.0) no description available & (at4g11290 : 231.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p22196|per2_arahy : 219.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 462.0) & (original description: Putative PRX70, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf10997_377270-380904' '(gnl|cdd|29388 : 415.0) no description available & (at4g16270 : 399.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G50990.1); Has 4922 Blast hits to 4898 proteins in 352 species: Archae - 0; Bacteria - 20; Metazoa - 11; Fungi - 467; Plants - 4342; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (p22195|per1_arahy : 288.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 798.0) & (original description: Putative PER40, Description = Peroxidase 40, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf11994_85453-89585' '(at2g18980 : 436.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase family protein (TAIR:AT4G30170.1); Has 4579 Blast hits to 4551 proteins in 298 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 207; Plants - 4299; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|29388 : 402.0) no description available & (p37834|per1_orysa : 221.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 872.0) & (original description: Putative prx2, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf12373_66412-70585' '(gnl|cdd|29388 : 448.0) no description available & (at5g05340 : 367.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p00434|perp7_brara : 363.0) Peroxidase P7 (EC 1.11.1.7) (TP7) - Brassica rapa (Turnip) & (reliability: 734.0) & (original description: Putative pod3, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf13029_354494-357670' '(gnl|cdd|29388 : 389.0) no description available & (at1g44970 : 257.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4592 Blast hits to 4563 proteins in 305 species: Archae - 0; Bacteria - 10; Metazoa - 5; Fungi - 193; Plants - 4307; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (p22195|per1_arahy : 256.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 514.0) & (original description: Putative prx6, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf13916_50866-54986' '(at4g25980 : 437.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, embryo, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G77100.1); Has 4310 Blast hits to 4291 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 82; Plants - 4190; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|29388 : 370.0) no description available & (p22196|per2_arahy : 297.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 874.0) & (original description: Putative pod5, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf14939_240769-243981' '(gnl|cdd|29388 : 398.0) no description available & (at5g14130 : 393.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, hypocotyl, fruit, root; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G37530.1); Has 4547 Blast hits to 4517 proteins in 291 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 177; Plants - 4298; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (p37834|per1_orysa : 216.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 786.0) & (original description: Putative PER55, Description = Peroxidase 55, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf15496_82121-85095' '(at4g17690 : 370.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G47000.1); Has 4832 Blast hits to 4807 proteins in 324 species: Archae - 0; Bacteria - 6; Metazoa - 12; Fungi - 404; Plants - 4331; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (gnl|cdd|29388 : 368.0) no description available & (p22196|per2_arahy : 217.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 740.0) & (original description: Putative PER41, Description = Peroxidase 41, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf15515_178239-184299' '(gnl|cdd|29388 : 440.0) no description available & (p22195|per1_arahy : 394.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g05340 : 347.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 694.0) & (original description: Putative px4, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf15995_56768-62964' '(gnl|cdd|29388 : 318.0) no description available & (at4g25980 : 296.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, embryo, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G77100.1); Has 4310 Blast hits to 4291 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 82; Plants - 4190; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (p22196|per2_arahy : 229.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 592.0) & (original description: Putative pod5, Description = Peroxidase, PFAM = PF00141;PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf16024_17896-22272' '(at2g18980 : 477.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase family protein (TAIR:AT4G30170.1); Has 4579 Blast hits to 4551 proteins in 298 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 207; Plants - 4299; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|29388 : 403.0) no description available & (p37834|per1_orysa : 239.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 954.0) & (original description: Putative PER16, Description = Peroxidase 16, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf16107_53242-86613' '(at1g71695 : 431.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: cell wall, vacuole, membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4523 Blast hits to 4498 proteins in 279 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 207; Plants - 4264; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (gnl|cdd|29388 : 407.0) no description available & (p37834|per1_orysa : 239.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 862.0) & (original description: Putative prx2, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf16622_86824-91591' '(gnl|cdd|29388 : 465.0) no description available & (at5g66390 : 454.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G50990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p22195|per1_arahy : 267.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 908.0) & (original description: Putative PER72, Description = Peroxidase 72, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf20924_190174-193455' '(at1g05260 : 287.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|29388 : 237.0) no description available & (p37834|per1_orysa : 223.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 532.0) & (original description: Putative pa9, Description = Peroxidase, PFAM = PF00141)' T '26.12' 'misc.peroxidases' 'niben101scf23113_191733-194185' '(gnl|cdd|29388 : 193.0) no description available & (at5g05340 : 184.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p00434|perp7_brara : 174.0) Peroxidase P7 (EC 1.11.1.7) (TP7) - Brassica rapa (Turnip) & (reliability: 368.0) & (original description: Putative PER6, Description = Peroxidase, PFAM = PF00141)' T '26.13' 'misc.acid and other phosphatases' 'nbv0.3scaffold5769_4095-24949' '(at3g52820 : 622.0) purple acid phosphatase 22 (PAP22); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 21 (TAIR:AT3G52810.1); Has 2151 Blast hits to 2132 proteins in 447 species: Archae - 3; Bacteria - 778; Metazoa - 239; Fungi - 77; Plants - 761; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink). & (gnl|cdd|36592 : 410.0) no description available & (q09131|ppaf_soybn : 281.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (reliability: 1244.0) & (original description: Putative PAP22, Description = Purple acid phosphatase 22, PFAM = PF14008;PF00149;PF16656)' T '26.13' 'misc.acid and other phosphatases' 'nbv0.3scaffold10575_33642-47384' '(at5g50400 : 837.0) purple acid phosphatase 27 (PAP27); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 24 (TAIR:AT4G24890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q687e1|npp_horvu : 568.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (gnl|cdd|36592 : 337.0) no description available & (reliability: 1674.0) & (original description: Putative npp, Description = Purple acid phosphatase, PFAM = PF14008;PF00149)' T '26.13' 'misc.acid and other phosphatases' 'nbv0.3scaffold13497_22680-27143' '(at1g07630 : 630.0) Encodes a protein phosphatase 2C like gene, similar to POL. Involved in leaf development. Knockout mutants have abnormally shaped leaves.; pol-like 5 (PLL5); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation, leaf development; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: poltergeist like 4 (TAIR:AT2G28890.1); Has 2889 Blast hits to 2855 proteins in 251 species: Archae - 0; Bacteria - 18; Metazoa - 486; Fungi - 220; Plants - 1762; Viruses - 0; Other Eukaryotes - 403 (source: NCBI BLink). & (gnl|cdd|35919 : 354.0) no description available & (gnl|cdd|29062 : 133.0) no description available & (reliability: 1260.0) & (original description: Putative PLL5, Description = Probable protein phosphatase 2C 4, PFAM = PF00481)' T '26.13' 'misc.acid and other phosphatases' 'nbv0.3scaffold19783_13649-16749' '(gnl|cdd|36593 : 219.0) no description available & (at4g16580 : 210.0) Protein phosphatase 2C family protein; FUNCTIONS IN: phosphoprotein phosphatase activity, catalytic activity; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Sporulation stage II, protein E C-terminal (InterPro:IPR010822); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66720.1); Has 838 Blast hits to 828 proteins in 210 species: Archae - 0; Bacteria - 2; Metazoa - 184; Fungi - 235; Plants - 232; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (gnl|cdd|29062 : 80.8) no description available & (reliability: 404.0) & (original description: Putative dl4315c, Description = Protein phosphatase 2c, putative, PFAM = PF07228)' T '26.13' 'misc.acid and other phosphatases' 'nbv0.3scaffold20758_6906-29220' '(at5g15070 : 1737.0) Phosphoglycerate mutase-like family protein; FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, acid phosphatase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, embryo, leaf whorl, flower, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-2 (InterPro:IPR000560), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase-like family protein (TAIR:AT3G01310.2). & (gnl|cdd|36275 : 1103.0) no description available & (gnl|cdd|84696 : 90.2) no description available & (reliability: 3474.0) & (original description: Putative ppip5k2, Description = Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2, PFAM = PF00328)' T '26.13' 'misc.acid and other phosphatases' 'nbv0.3scaffold23737_17080-22551' '(at3g54020 : 503.0) Inositol phosphorylceramide synthase; Arabidopsis Inositol phosphorylceramide synthase 1 (AtIPCS1); FUNCTIONS IN: inositol phosphoceramide synthase activity; INVOLVED IN: sphingolipid biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 6 plant structures; BEST Arabidopsis thaliana protein match is: Arabidopsis Inositol phosphorylceramide synthase 2 (TAIR:AT2G37940.1); Has 447 Blast hits to 444 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 254; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (gnl|cdd|38268 : 247.0) no description available & (reliability: 1006.0) & (original description: Putative IPCS1, Description = Phosphatidylinositol:ceramide inositolphosphotransferase 1, PFAM = PF14360)' T '26.13' 'misc.acid and other phosphatases' 'nbv0.3scaffold24742_3727-8276' '(at3g15820 : 327.0) Functions as phosphatidylcholine:diacylglycerol cholinephosphotransferase, a major reaction for the transfer of 18:1 into phosphatidylcholine for desaturation and also for the reverse transfer of 18:2 and 18:3 into the triacylglycerols synthesis pathway; REDUCED OLEATE DESATURATION 1 (ROD1); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase-related / PAP2-related (TAIR:AT3G15830.1); Has 58 Blast hits to 58 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 654.0) & (original description: Putative ROD1, Description = Phosphatidylcholine:diacylglycerol cholinephosphotransferase 1, PFAM = )' T '26.13' 'misc.acid and other phosphatases' 'nbv0.3scaffold29219_5877-11196' '(at5g66450 : 196.0) Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: Phosphatidic acid phosphatase (PAP2) family protein (TAIR:AT3G50920.1); Has 319 Blast hits to 319 proteins in 143 species: Archae - 0; Bacteria - 10; Metazoa - 89; Fungi - 89; Plants - 87; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|38356 : 134.0) no description available & (gnl|cdd|48087 : 98.0) no description available & (reliability: 392.0) & (original description: Putative BnaA07g12610D, Description = BnaA07g12610D protein, PFAM = PF01569)' T '26.13' 'misc.acid and other phosphatases' 'nbv0.3scaffold33243_5027-11602' '(at3g02600 : 427.0) Encodes phosphatidic acid phosphatase. Expressed during germination.; lipid phosphate phosphatase 3 (LPP3); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase 1 (TAIR:AT2G01180.1); Has 2087 Blast hits to 2082 proteins in 396 species: Archae - 13; Bacteria - 367; Metazoa - 921; Fungi - 397; Plants - 200; Viruses - 3; Other Eukaryotes - 186 (source: NCBI BLink). & (gnl|cdd|38240 : 265.0) no description available & (gnl|cdd|48094 : 240.0) no description available & (reliability: 854.0) & (original description: Putative LPP3, Description = Putative lipid phosphate phosphatase 3, chloroplastic, PFAM = PF01569)' T '26.13' 'misc.acid and other phosphatases' 'nbv0.3scaffold55614_1692-10868' '(at1g09870 : 457.0) histidine acid phosphatase family protein; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-2 (InterPro:IPR000560), Histidine acid phosphatase, eukaryotic (InterPro:IPR016274); Has 765 Blast hits to 755 proteins in 231 species: Archae - 0; Bacteria - 126; Metazoa - 192; Fungi - 356; Plants - 52; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|36596 : 259.0) no description available & (gnl|cdd|84696 : 112.0) no description available & (reliability: 914.0) & (original description: Putative At1g09870, Description = At1g09870/F21M12_26, PFAM = PF00328;PF00328)' T '26.13' 'misc.acid and other phosphatases' 'nbv0.3scaffold75731_720-5148' '(at2g28890 : 612.0) Encodes a protein phosphatase 2C like gene, similar to POL. Involved in leaf development. Knockout mutants have abnormally shaped leaves.; poltergeist like 4 (PLL4); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation, leaf development; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: pol-like 5 (TAIR:AT1G07630.1); Has 2844 Blast hits to 2809 proteins in 262 species: Archae - 0; Bacteria - 50; Metazoa - 567; Fungi - 230; Plants - 1630; Viruses - 0; Other Eukaryotes - 367 (source: NCBI BLink). & (gnl|cdd|35919 : 361.0) no description available & (gnl|cdd|29062 : 140.0) no description available & (reliability: 1224.0) & (original description: Putative PLL4, Description = Probable protein phosphatase 2C 23, PFAM = PF00481)' T '26.13' 'misc.acid and other phosphatases' 'nbv0.5scaffold32_1277663-1299977' '(at5g15070 : 1434.0) Phosphoglycerate mutase-like family protein; FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, acid phosphatase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, embryo, leaf whorl, flower, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-2 (InterPro:IPR000560), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase-like family protein (TAIR:AT3G01310.2). & (gnl|cdd|36275 : 836.0) no description available & (gnl|cdd|84696 : 91.0) no description available & (reliability: 2868.0) & (original description: Putative At3g01310, Description = Putative uncharacterized protein At3g01310, PFAM = PF00328)' T '26.13' 'misc.acid and other phosphatases' 'nbv0.5scaffold449_732276-743144' '(at4g14930 : 264.0) Survival protein SurE-like phosphatase/nucleotidase; FUNCTIONS IN: hydrolase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Survival protein SurE-like phosphatase/nucleotidase (InterPro:IPR002828); BEST Arabidopsis thaliana protein match is: Survival protein SurE-like phosphatase/nucleotidase (TAIR:AT1G72880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80628 : 159.0) no description available & (reliability: 528.0) & (original description: Putative surE, Description = Survival protein SurE-like phosphatase/nucleotidase, PFAM = PF01975)' T '26.13' 'misc.acid and other phosphatases' 'nbv0.5scaffold2258_104727-114128' '(at5g50400 : 841.0) purple acid phosphatase 27 (PAP27); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 24 (TAIR:AT4G24890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q687e1|npp_horvu : 479.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (gnl|cdd|36592 : 334.0) no description available & (reliability: 1682.0) & (original description: Putative ppd3, Description = Putative metallophosphatase, PFAM = PF14008;PF00149;PF16656)' T '26.13' 'misc.acid and other phosphatases' 'nbv0.5scaffold2693_120779-134214' '(at5g50400 : 348.0) purple acid phosphatase 27 (PAP27); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 24 (TAIR:AT4G24890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36592 : 246.0) no description available & (q687e1|npp_horvu : 206.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (reliability: 696.0) & (original description: Putative NPP1, Description = Purple acid phosphatase, PFAM = PF14008;PF00149;PF16656)' T '26.13' 'misc.acid and other phosphatases' 'niben044scf00001706ctg010_1493-5191' '(at1g17710 : 369.0) Pyridoxal phosphate phosphatase-related protein; FUNCTIONS IN: phosphatase activity; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate phosphatase-related (InterPro:IPR006384); BEST Arabidopsis thaliana protein match is: phosphate starvation-induced gene 2 (TAIR:AT1G73010.1); Has 346 Blast hits to 336 proteins in 99 species: Archae - 0; Bacteria - 6; Metazoa - 176; Fungi - 16; Plants - 103; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|70360 : 345.0) no description available & (gnl|cdd|38330 : 325.0) no description available & (reliability: 738.0) & (original description: Putative At1g17710, Description = Inorganic pyrophosphatase 2, PFAM = PF06888)' T '26.13' 'misc.acid and other phosphatases' 'niben044scf00011108ctg011_33281-36316' '(at5g45700 : 212.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: phosphatase activity; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G29770.1); Has 2652 Blast hits to 2641 proteins in 258 species: Archae - 0; Bacteria - 12; Metazoa - 831; Fungi - 550; Plants - 465; Viruses - 15; Other Eukaryotes - 779 (source: NCBI BLink). & (gnl|cdd|36818 : 197.0) no description available & (gnl|cdd|47876 : 169.0) no description available & (reliability: 424.0) & (original description: Putative At5g45700, Description = Haloacid dehalogenase-like hydrolase (HAD) superfamily protein, PFAM = PF03031)' T '26.13' 'misc.acid and other phosphatases' 'niben044scf00012466ctg002_3689-6060' '(gnl|cdd|67385 : 167.0) no description available & (at4g29260 : 165.0) HAD superfamily, subfamily IIIB acid phosphatase ; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519), Vegetative storage protein/acid phosphatase (InterPro:IPR014403), Acid phosphatase, plant (InterPro:IPR010028); BEST Arabidopsis thaliana protein match is: HAD superfamily, subfamily IIIB acid phosphatase (TAIR:AT4G29270.1); Has 713 Blast hits to 710 proteins in 181 species: Archae - 0; Bacteria - 300; Metazoa - 2; Fungi - 0; Plants - 366; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (p15490|vspa_soybn : 119.0) Stem 28 kDa glycoprotein precursor (Vegetative storage protein A) - Glycine max (Soybean) & (reliability: 330.0) & (original description: Putative APS1, Description = HAD superfamily, subfamily IIIB acid phosphatase, PFAM = PF03767)' T '26.13' 'misc.acid and other phosphatases' 'niben044scf00012513ctg003_48672-59076' '(at1g07990 : 902.0) SIT4 phosphatase-associated family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SIT4 phosphatase-associated protein (InterPro:IPR007587); BEST Arabidopsis thaliana protein match is: SIT4 phosphatase-associated family protein (TAIR:AT2G28360.1); Has 1048 Blast hits to 891 proteins in 200 species: Archae - 0; Bacteria - 31; Metazoa - 354; Fungi - 329; Plants - 109; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink). & (gnl|cdd|37284 : 548.0) no description available & (gnl|cdd|68084 : 344.0) no description available & (reliability: 1804.0) & (original description: Putative BnaA08g17320D, Description = BnaA08g17320D protein, PFAM = PF04499;PF04499)' T '26.13' 'misc.acid and other phosphatases' 'niben044scf00013631ctg000_665-12661' '(at5g50400 : 904.0) purple acid phosphatase 27 (PAP27); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 24 (TAIR:AT4G24890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q687e1|npp_horvu : 568.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (gnl|cdd|36592 : 331.0) no description available & (reliability: 1808.0) & (original description: Putative ppd4, Description = Purple acid phosphatase, PFAM = PF14008;PF00149)' T '26.13' 'misc.acid and other phosphatases' 'niben044scf00013645ctg009_2737-11325' '(at1g07990 : 703.0) SIT4 phosphatase-associated family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SIT4 phosphatase-associated protein (InterPro:IPR007587); BEST Arabidopsis thaliana protein match is: SIT4 phosphatase-associated family protein (TAIR:AT2G28360.1); Has 1048 Blast hits to 891 proteins in 200 species: Archae - 0; Bacteria - 31; Metazoa - 354; Fungi - 329; Plants - 109; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink). & (gnl|cdd|37284 : 415.0) no description available & (gnl|cdd|68084 : 334.0) no description available & (reliability: 1406.0) & (original description: Putative Ccrd_012273, Description = Armadillo-type fold, PFAM = PF04499;PF04499)' T '26.13' 'misc.acid and other phosphatases' 'niben044scf00013645ctg010_1762-7079' '(at3g45190 : 249.0) SIT4 phosphatase-associated family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SIT4 phosphatase-associated protein (InterPro:IPR007587); BEST Arabidopsis thaliana protein match is: SIT4 phosphatase-associated family protein (TAIR:AT1G07990.1); Has 1154 Blast hits to 1024 proteins in 229 species: Archae - 4; Bacteria - 93; Metazoa - 408; Fungi - 293; Plants - 121; Viruses - 2; Other Eukaryotes - 233 (source: NCBI BLink). & (gnl|cdd|37284 : 157.0) no description available & (reliability: 498.0) & (original description: Putative At1g30470, Description = SIT4 phosphatase-associated family protein, PFAM = )' T '26.13' 'misc.acid and other phosphatases' 'niben044scf00019018ctg005_2626-11862' '(at3g45190 : 563.0) SIT4 phosphatase-associated family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SIT4 phosphatase-associated protein (InterPro:IPR007587); BEST Arabidopsis thaliana protein match is: SIT4 phosphatase-associated family protein (TAIR:AT1G07990.1); Has 1154 Blast hits to 1024 proteins in 229 species: Archae - 4; Bacteria - 93; Metazoa - 408; Fungi - 293; Plants - 121; Viruses - 2; Other Eukaryotes - 233 (source: NCBI BLink). & (gnl|cdd|37284 : 390.0) no description available & (gnl|cdd|68084 : 342.0) no description available & (reliability: 1126.0) & (original description: Putative At1g30470, Description = SIT4 phosphatase-associated family protein, PFAM = PF04499;PF04499)' T '26.13' 'misc.acid and other phosphatases' 'niben044scf00020058ctg012_699-5440' '(at2g28890 : 609.0) Encodes a protein phosphatase 2C like gene, similar to POL. Involved in leaf development. Knockout mutants have abnormally shaped leaves.; poltergeist like 4 (PLL4); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation, leaf development; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: pol-like 5 (TAIR:AT1G07630.1); Has 2844 Blast hits to 2809 proteins in 262 species: Archae - 0; Bacteria - 50; Metazoa - 567; Fungi - 230; Plants - 1630; Viruses - 0; Other Eukaryotes - 367 (source: NCBI BLink). & (gnl|cdd|35919 : 358.0) no description available & (gnl|cdd|29062 : 137.0) no description available & (reliability: 1218.0) & (original description: Putative BnaA08g29070D, Description = BnaA08g29070D protein, PFAM = PF00481)' T '26.13' 'misc.acid and other phosphatases' 'niben044scf00027633ctg003_1-4307' '(at3g01310 : 273.0) Phosphoglycerate mutase-like family protein; FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, acid phosphatase activity; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP-grasp fold, RimK-type (InterPro:IPR013651), Histidine phosphatase superfamily, clade-2 (InterPro:IPR000560), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase-like family protein (TAIR:AT5G15070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36275 : 229.0) no description available & (reliability: 504.0) & (original description: Putative vip2, Description = Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1, PFAM = )' T '26.13' 'misc.acid and other phosphatases' 'niben044scf00046686ctg002_16065-19825' '(at1g07630 : 548.0) Encodes a protein phosphatase 2C like gene, similar to POL. Involved in leaf development. Knockout mutants have abnormally shaped leaves.; pol-like 5 (PLL5); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation, leaf development; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: poltergeist like 4 (TAIR:AT2G28890.1); Has 2889 Blast hits to 2855 proteins in 251 species: Archae - 0; Bacteria - 18; Metazoa - 486; Fungi - 220; Plants - 1762; Viruses - 0; Other Eukaryotes - 403 (source: NCBI BLink). & (gnl|cdd|35919 : 296.0) no description available & (gnl|cdd|29062 : 124.0) no description available & (reliability: 1096.0) & (original description: Putative PLL5, Description = Probable protein phosphatase 2C 4, PFAM = PF00481)' T '26.13' 'misc.acid and other phosphatases' 'niben044scf00053423ctg001_62-6744' '(at1g72880 : 403.0) Survival protein SurE-like phosphatase/nucleotidase; FUNCTIONS IN: hydrolase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Survival protein SurE-like phosphatase/nucleotidase (InterPro:IPR002828); BEST Arabidopsis thaliana protein match is: Survival protein SurE-like phosphatase/nucleotidase (TAIR:AT4G14930.1); Has 4548 Blast hits to 4546 proteins in 1570 species: Archae - 197; Bacteria - 3352; Metazoa - 2; Fungi - 8; Plants - 92; Viruses - 0; Other Eukaryotes - 897 (source: NCBI BLink). & (gnl|cdd|80628 : 153.0) no description available & (reliability: 806.0) & (original description: Putative At1g72880, Description = At1g72880, PFAM = PF01975)' T '26.13' 'misc.acid and other phosphatases' 'niben101ctg16346_700-6787' '(q09131|ppaf_soybn : 743.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (at2g16430 : 731.0) purple acid phosphatase 10 (PAP10); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 12 (TAIR:AT2G27190.1); Has 1830 Blast hits to 1814 proteins in 380 species: Archae - 3; Bacteria - 548; Metazoa - 186; Fungi - 79; Plants - 763; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (gnl|cdd|36592 : 461.0) no description available & (gnl|cdd|84562 : 91.5) no description available & (reliability: 1462.0) & (original description: Putative PAP2, Description = Purple acid phosphatase 2, PFAM = PF00149;PF16656;PF14008)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf00039_128464-144034' '(at5g50400 : 364.0) purple acid phosphatase 27 (PAP27); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 24 (TAIR:AT4G24890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36592 : 264.0) no description available & (q687e1|npp_horvu : 222.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (reliability: 728.0) & (original description: Putative NPP1, Description = Purple acid phosphatase, PFAM = PF16656;PF14008;PF00149)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf00073_638161-641471' '(at5g45700 : 218.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: phosphatase activity; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G29770.1); Has 2652 Blast hits to 2641 proteins in 258 species: Archae - 0; Bacteria - 12; Metazoa - 831; Fungi - 550; Plants - 465; Viruses - 15; Other Eukaryotes - 779 (source: NCBI BLink). & (gnl|cdd|36818 : 193.0) no description available & (gnl|cdd|47876 : 168.0) no description available & (reliability: 436.0) & (original description: Putative At5g45700, Description = Haloacid dehalogenase-like hydrolase (HAD) superfamily protein, PFAM = PF03031)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf00133_242596-253333' '(at1g09870 : 660.0) histidine acid phosphatase family protein; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-2 (InterPro:IPR000560), Histidine acid phosphatase, eukaryotic (InterPro:IPR016274); Has 765 Blast hits to 755 proteins in 231 species: Archae - 0; Bacteria - 126; Metazoa - 192; Fungi - 356; Plants - 52; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|36596 : 342.0) no description available & (gnl|cdd|84696 : 142.0) no description available & (reliability: 1320.0) & (original description: Putative pco091084, Description = Acid phosphatase, PFAM = PF00328)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf00157_26497-32345' '(at3g20500 : 700.0) purple acid phosphatase 18 (PAP18); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 22 (TAIR:AT3G52820.1); Has 2123 Blast hits to 2103 proteins in 464 species: Archae - 3; Bacteria - 774; Metazoa - 209; Fungi - 79; Plants - 766; Viruses - 0; Other Eukaryotes - 292 (source: NCBI BLink). & (gnl|cdd|36592 : 401.0) no description available & (q09131|ppaf_soybn : 274.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (reliability: 1400.0) & (original description: Putative PAP18, Description = Purple acid phosphatase 18, PFAM = PF00149;PF16656;PF14008)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf00219_227689-243841' '(at4g11800 : 1529.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT4G23000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 3058.0) & (original description: Putative BnaC09g23760D, Description = BnaC09g23760D protein, PFAM = PF00149)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf00231_778199-782751' '(at3g02600 : 355.0) Encodes phosphatidic acid phosphatase. Expressed during germination.; lipid phosphate phosphatase 3 (LPP3); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase 1 (TAIR:AT2G01180.1); Has 2087 Blast hits to 2082 proteins in 396 species: Archae - 13; Bacteria - 367; Metazoa - 921; Fungi - 397; Plants - 200; Viruses - 3; Other Eukaryotes - 186 (source: NCBI BLink). & (gnl|cdd|38240 : 231.0) no description available & (gnl|cdd|48094 : 223.0) no description available & (reliability: 710.0) & (original description: Putative LPP1, Description = Lipid phosphate phosphatase 1, PFAM = PF01569)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf00444_62988-68205' '(at1g07630 : 796.0) Encodes a protein phosphatase 2C like gene, similar to POL. Involved in leaf development. Knockout mutants have abnormally shaped leaves.; pol-like 5 (PLL5); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation, leaf development; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: poltergeist like 4 (TAIR:AT2G28890.1); Has 2889 Blast hits to 2855 proteins in 251 species: Archae - 0; Bacteria - 18; Metazoa - 486; Fungi - 220; Plants - 1762; Viruses - 0; Other Eukaryotes - 403 (source: NCBI BLink). & (gnl|cdd|35919 : 304.0) no description available & (gnl|cdd|29062 : 133.0) no description available & (reliability: 1592.0) & (original description: Putative PLL5, Description = Probable protein phosphatase 2C 4, PFAM = PF00481)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf00507_28934-33497' '(at5g18980 : 947.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G06210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1892.0) & (original description: Putative dl3180w, Description = Putative uncharacterized protein AT4g14280, PFAM = )' T '26.13' 'misc.acid and other phosphatases' 'niben101scf00825_61421-71088' '(at5g46410 : 350.0) Encodes a SCP1-like small phosphatase (SSP). Three SSPs form a unique group with long N-terminal extensions: AT5G46410 (SSP4), AT5G11860 (SSP5), AT4G18140 (SSP4b). SSP4 and SSP4b were localized exclusively in the nuclei, whereas SSP5 accumulated in both nuclei and cytoplasm. All three SSPs encodes active CTD phosphatases like animal SCP1 family proteins, with distinct substrate specificities: SSP4 and SSP4b could dephosphorylate both Ser2-PO(4) and Ser5-PO(4) of CTD, whereas SSP5 dephosphorylated only Ser5-PO(4).; SCP1-like small phosphatase 4 (SSP4); CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: SCP1-like small phosphatase 4b (TAIR:AT4G18140.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36818 : 233.0) no description available & (gnl|cdd|86219 : 187.0) no description available & (reliability: 700.0) & (original description: Putative SSP4, Description = SCP1-like small phosphatase 4, PFAM = PF03031)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf00870_1791522-1797011' '(at1g72880 : 417.0) Survival protein SurE-like phosphatase/nucleotidase; FUNCTIONS IN: hydrolase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Survival protein SurE-like phosphatase/nucleotidase (InterPro:IPR002828); BEST Arabidopsis thaliana protein match is: Survival protein SurE-like phosphatase/nucleotidase (TAIR:AT4G14930.1); Has 4548 Blast hits to 4546 proteins in 1570 species: Archae - 197; Bacteria - 3352; Metazoa - 2; Fungi - 8; Plants - 92; Viruses - 0; Other Eukaryotes - 897 (source: NCBI BLink). & (gnl|cdd|80628 : 152.0) no description available & (reliability: 834.0) & (original description: Putative At1g72880, Description = At1g72880, PFAM = PF01975)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf01273_180000-185673' '(at5g11860 : 337.0) Encodes a SCP1-like small phosphatase (SSP). Three SSPs form a unique group with long N-terminal extensions: AT5G46410 (SSP4), AT5G11860 (SSP5), AT4G18140 (SSP4b). SSP4 and SSP4b were localized exclusively in the nuclei, whereas SSP5 accumulated in both nuclei and cytoplasm. All three SSPs encodes active CTD phosphatases like animal SCP1 family proteins, with distinct substrate specificities: SSP4 and SSP4b could dephosphorylate both Ser2-PO(4) and Ser5-PO(4) of CTD, whereas SSP5 dephosphorylated only Ser5-PO(4).; SCP1-like small phosphatase 5; CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: SCP1-like small phosphatase 4 (TAIR:AT5G46410.1); Has 2780 Blast hits to 2771 proteins in 250 species: Archae - 0; Bacteria - 14; Metazoa - 839; Fungi - 559; Plants - 525; Viruses - 1; Other Eukaryotes - 842 (source: NCBI BLink). & (gnl|cdd|36818 : 251.0) no description available & (gnl|cdd|86219 : 184.0) no description available & (reliability: 674.0) & (original description: Putative NIF4, Description = Putative nuclear LIM interactor-interacting protein, PFAM = PF03031)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf01317_249272-253733' '(at1g07630 : 627.0) Encodes a protein phosphatase 2C like gene, similar to POL. Involved in leaf development. Knockout mutants have abnormally shaped leaves.; pol-like 5 (PLL5); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation, leaf development; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: poltergeist like 4 (TAIR:AT2G28890.1); Has 2889 Blast hits to 2855 proteins in 251 species: Archae - 0; Bacteria - 18; Metazoa - 486; Fungi - 220; Plants - 1762; Viruses - 0; Other Eukaryotes - 403 (source: NCBI BLink). & (gnl|cdd|35919 : 357.0) no description available & (gnl|cdd|29062 : 138.0) no description available & (reliability: 1254.0) & (original description: Putative PLL5, Description = Probable protein phosphatase 2C 4, PFAM = PF00481)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf01326_1057268-1076185' '(at5g15070 : 1545.0) Phosphoglycerate mutase-like family protein; FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, acid phosphatase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, embryo, leaf whorl, flower, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-2 (InterPro:IPR000560), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase-like family protein (TAIR:AT3G01310.2). & (gnl|cdd|36275 : 1001.0) no description available & (gnl|cdd|84696 : 88.6) no description available & (reliability: 3090.0) & (original description: Putative FAP160, Description = Acid phosphatase, PFAM = PF00328)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf01374_1532315-1535445' '(gnl|cdd|67385 : 257.0) no description available & (at4g25150 : 224.0) HAD superfamily, subfamily IIIB acid phosphatase ; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519), Vegetative storage protein/acid phosphatase (InterPro:IPR014403), Acid phosphatase, plant (InterPro:IPR010028); BEST Arabidopsis thaliana protein match is: HAD superfamily, subfamily IIIB acid phosphatase (TAIR:AT5G51260.1); Has 924 Blast hits to 919 proteins in 287 species: Archae - 0; Bacteria - 505; Metazoa - 2; Fungi - 0; Plants - 370; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (p15490|vspa_soybn : 208.0) Stem 28 kDa glycoprotein precursor (Vegetative storage protein A) - Glycine max (Soybean) & (reliability: 448.0) & (original description: Putative VSPA, Description = Stem 28 kDa glycoprotein, PFAM = PF03767)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf01406_160020-165288' '(at2g37940 : 505.0) I; Arabidopsis Inositol phosphorylceramide synthase 2 (AtIPCS2); BEST Arabidopsis thaliana protein match is: Arabidopsis Inositol phosphorylceramide synthase 1 (TAIR:AT3G54020.1); Has 438 Blast hits to 435 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 250; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|38268 : 247.0) no description available & (reliability: 988.0) & (original description: Putative IPCS2, Description = Phosphatidylinositol:ceramide inositolphosphotransferase 2, PFAM = PF14360)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf01435_141189-155120' '(at5g50400 : 910.0) purple acid phosphatase 27 (PAP27); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 24 (TAIR:AT4G24890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q687e1|npp_horvu : 538.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (gnl|cdd|36592 : 349.0) no description available & (reliability: 1820.0) & (original description: Putative ppd4, Description = Purple acid phosphatase, PFAM = PF14008;PF16656;PF00149)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf01697_2140221-2150228' '(at2g35320 : 395.0) homologue of the animal Eyes Absent genes. encodes a tyrosine-specific phosphatase. the protein sequence lacks the cys-containing signature of the classical tyrosine phosphatases. belongs to the aspartate-based phosphatases. The enzyme activity is strictly metal-dependent.; EYES ABSENT homolog (EYA); CONTAINS InterPro DOMAIN/s: EYA (InterPro:IPR006545); Has 432 Blast hits to 431 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 379; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|38317 : 273.0) no description available & (reliability: 790.0) & (original description: Putative EYA, Description = At2g35320/T4C15.1, PFAM = )' T '26.13' 'misc.acid and other phosphatases' 'niben101scf01759_621340-633000' '(at3g45190 : 924.0) SIT4 phosphatase-associated family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SIT4 phosphatase-associated protein (InterPro:IPR007587); BEST Arabidopsis thaliana protein match is: SIT4 phosphatase-associated family protein (TAIR:AT1G07990.1); Has 1154 Blast hits to 1024 proteins in 229 species: Archae - 4; Bacteria - 93; Metazoa - 408; Fungi - 293; Plants - 121; Viruses - 2; Other Eukaryotes - 233 (source: NCBI BLink). & (gnl|cdd|37284 : 548.0) no description available & (gnl|cdd|68084 : 338.0) no description available & (reliability: 1848.0) & (original description: Putative Ccrd_012273, Description = Armadillo-type fold, PFAM = PF04499;PF04499)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf01830_161646-170833' '(at5g50400 : 905.0) purple acid phosphatase 27 (PAP27); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 24 (TAIR:AT4G24890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q687e1|npp_horvu : 539.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (gnl|cdd|36592 : 347.0) no description available & (reliability: 1810.0) & (original description: Putative npp, Description = Nucleotide pyrophosphatase/phosphodiesterase, PFAM = PF14008;PF00149;PF16656)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf01831_233536-241272' '(at5g57140 : 479.0) purple acid phosphatase 28 (PAP28); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Phosphoesterase At2g46880 (InterPro:IPR011230); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 29 (TAIR:AT5G63140.1); Has 678 Blast hits to 661 proteins in 227 species: Archae - 0; Bacteria - 324; Metazoa - 0; Fungi - 205; Plants - 115; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|36645 : 395.0) no description available & (reliability: 958.0) & (original description: Putative PAP28, Description = Probable inactive purple acid phosphatase 28, PFAM = PF00149)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf01842_173921-182338' '(at3g52780 : 577.0) PAP20; FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 22 (TAIR:AT3G52820.1); Has 2133 Blast hits to 2115 proteins in 453 species: Archae - 1; Bacteria - 782; Metazoa - 195; Fungi - 75; Plants - 759; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink). & (gnl|cdd|36592 : 423.0) no description available & (p80366|ppaf_phavu : 289.0) Iron(III)-zinc(II) purple acid phosphatase (EC 3.1.3.2) (PAP) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1154.0) & (original description: Putative PAP20, Description = Probable purple acid phosphatase 20, PFAM = PF14008;PF16656;PF00149)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf01887_865363-879825' '(at4g23000 : 1548.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT4G11800.1); Has 177 Blast hits to 132 proteins in 49 species: Archae - 0; Bacteria - 98; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 3090.0) & (original description: Putative BnaC09g23760D, Description = BnaC09g23760D protein, PFAM = PF00149)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf01912_72259-87513' '(at3g01510 : 818.0) Encodes a putative phosphatase, LSF1, required for normal starch turnover in leaves.; like SEX4 1 (LSF1); FUNCTIONS IN: protein tyrosine/serine/threonine phosphatase activity; INVOLVED IN: starch catabolic process; LOCATED IN: starch grain, chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), PDZ/DHR/GLGF (InterPro:IPR001478), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: dual specificity protein phosphatase (DsPTP1) family protein (TAIR:AT3G52180.1); Has 834 Blast hits to 834 proteins in 152 species: Archae - 0; Bacteria - 14; Metazoa - 310; Fungi - 61; Plants - 322; Viruses - 12; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|30346 : 94.2) no description available & (gnl|cdd|36829 : 90.9) no description available & (reliability: 1636.0) & (original description: Putative LSF1, Description = Phosphoglucan phosphatase LSF1, chloroplastic, PFAM = PF00782;PF16561)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf02253_1114158-1141161' '(at3g01310 : 1722.0) Phosphoglycerate mutase-like family protein; FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, acid phosphatase activity; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP-grasp fold, RimK-type (InterPro:IPR013651), Histidine phosphatase superfamily, clade-2 (InterPro:IPR000560), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase-like family protein (TAIR:AT5G15070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36275 : 1103.0) no description available & (gnl|cdd|84696 : 89.0) no description available & (reliability: 3428.0) & (original description: Putative VIP1, Description = Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase, PFAM = PF00328)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf02446_88605-93762' '(at5g66450 : 189.0) Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: Phosphatidic acid phosphatase (PAP2) family protein (TAIR:AT3G50920.1); Has 319 Blast hits to 319 proteins in 143 species: Archae - 0; Bacteria - 10; Metazoa - 89; Fungi - 89; Plants - 87; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|38356 : 138.0) no description available & (gnl|cdd|48087 : 99.5) no description available & (reliability: 378.0) & (original description: Putative BnaA07g12610D, Description = BnaA07g12610D protein, PFAM = PF01569)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf02511_654120-662387' '(at1g13750 : 917.0) Purple acid phosphatases superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity, metal ion binding, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Fibronectin, type III (InterPro:IPR003961), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 27 (TAIR:AT5G50400.1); Has 1802 Blast hits to 1786 proteins in 349 species: Archae - 1; Bacteria - 481; Metazoa - 191; Fungi - 77; Plants - 759; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink). & (q687e1|npp_horvu : 521.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (gnl|cdd|36592 : 345.0) no description available & (reliability: 1834.0) & (original description: Putative ppd1, Description = Purple acid phosphatase, PFAM = PF00149;PF14008;PF16656)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf02731_607882-616017' '(at2g35320 : 385.0) homologue of the animal Eyes Absent genes. encodes a tyrosine-specific phosphatase. the protein sequence lacks the cys-containing signature of the classical tyrosine phosphatases. belongs to the aspartate-based phosphatases. The enzyme activity is strictly metal-dependent.; EYES ABSENT homolog (EYA); CONTAINS InterPro DOMAIN/s: EYA (InterPro:IPR006545); Has 432 Blast hits to 431 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 379; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|38317 : 262.0) no description available & (reliability: 770.0) & (original description: Putative EYA, Description = At2g35320/T4C15.1, PFAM = )' T '26.13' 'misc.acid and other phosphatases' 'niben101scf02816_188041-192165' '(at1g17710 : 307.0) Pyridoxal phosphate phosphatase-related protein; FUNCTIONS IN: phosphatase activity; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate phosphatase-related (InterPro:IPR006384); BEST Arabidopsis thaliana protein match is: phosphate starvation-induced gene 2 (TAIR:AT1G73010.1); Has 346 Blast hits to 336 proteins in 99 species: Archae - 0; Bacteria - 6; Metazoa - 176; Fungi - 16; Plants - 103; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|70360 : 303.0) no description available & (gnl|cdd|38330 : 290.0) no description available & (reliability: 614.0) & (original description: Putative At4g29530, Description = Inorganic pyrophosphatase 3, PFAM = PF06888)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf02831_505286-511930' '(at1g72880 : 414.0) Survival protein SurE-like phosphatase/nucleotidase; FUNCTIONS IN: hydrolase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Survival protein SurE-like phosphatase/nucleotidase (InterPro:IPR002828); BEST Arabidopsis thaliana protein match is: Survival protein SurE-like phosphatase/nucleotidase (TAIR:AT4G14930.1); Has 4548 Blast hits to 4546 proteins in 1570 species: Archae - 197; Bacteria - 3352; Metazoa - 2; Fungi - 8; Plants - 92; Viruses - 0; Other Eukaryotes - 897 (source: NCBI BLink). & (gnl|cdd|80628 : 149.0) no description available & (reliability: 828.0) & (original description: Putative surE, Description = 5'-nucleotidase surE, PFAM = PF01975)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf02909_230487-235895' '(gnl|cdd|36593 : 220.0) no description available & (at4g16580 : 212.0) Protein phosphatase 2C family protein; FUNCTIONS IN: phosphoprotein phosphatase activity, catalytic activity; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Sporulation stage II, protein E C-terminal (InterPro:IPR010822); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66720.1); Has 838 Blast hits to 828 proteins in 210 species: Archae - 0; Bacteria - 2; Metazoa - 184; Fungi - 235; Plants - 232; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative dl4315c, Description = Protein phosphatase 2c, putative, PFAM = PF07228)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf03022_17465-32253' '(gnl|cdd|37890 : 444.0) no description available & (at1g14700 : 439.0) purple acid phosphatase 3 (PAP3); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 8 (TAIR:AT2G01890.1); Has 1092 Blast hits to 1082 proteins in 272 species: Archae - 0; Bacteria - 250; Metazoa - 335; Fungi - 8; Plants - 191; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (reliability: 878.0) & (original description: Putative PAP3, Description = Purple acid phosphatase 3, PFAM = PF00149)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf03184_275069-288522' '(at5g50400 : 868.0) purple acid phosphatase 27 (PAP27); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 24 (TAIR:AT4G24890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q687e1|npp_horvu : 570.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (gnl|cdd|36592 : 335.0) no description available & (reliability: 1736.0) & (original description: Putative npp, Description = Nucleotide pyrophosphatase/phosphodiesterase, PFAM = PF00149;PF14008)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf03184_275967-283589' '(at5g50400 : 620.0) purple acid phosphatase 27 (PAP27); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 24 (TAIR:AT4G24890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q687e1|npp_horvu : 418.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (gnl|cdd|36592 : 268.0) no description available & (reliability: 1240.0) & (original description: Putative npp, Description = Purple acid phosphatase, PFAM = PF00149)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf03307_390223-401626' '(gnl|cdd|67385 : 277.0) no description available & (at4g29260 : 272.0) HAD superfamily, subfamily IIIB acid phosphatase ; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519), Vegetative storage protein/acid phosphatase (InterPro:IPR014403), Acid phosphatase, plant (InterPro:IPR010028); BEST Arabidopsis thaliana protein match is: HAD superfamily, subfamily IIIB acid phosphatase (TAIR:AT4G29270.1); Has 713 Blast hits to 710 proteins in 181 species: Archae - 0; Bacteria - 300; Metazoa - 2; Fungi - 0; Plants - 366; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (p15490|vspa_soybn : 182.0) Stem 28 kDa glycoprotein precursor (Vegetative storage protein A) - Glycine max (Soybean) & (reliability: 544.0) & (original description: Putative bci3, Description = Acid phosphatase 1, PFAM = PF03767)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf03328_235107-238805' '(at1g17710 : 352.0) Pyridoxal phosphate phosphatase-related protein; FUNCTIONS IN: phosphatase activity; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate phosphatase-related (InterPro:IPR006384); BEST Arabidopsis thaliana protein match is: phosphate starvation-induced gene 2 (TAIR:AT1G73010.1); Has 346 Blast hits to 336 proteins in 99 species: Archae - 0; Bacteria - 6; Metazoa - 176; Fungi - 16; Plants - 103; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|70360 : 326.0) no description available & (gnl|cdd|38330 : 307.0) no description available & (reliability: 704.0) & (original description: Putative At1g17710, Description = Inorganic pyrophosphatase 2, PFAM = PF06888)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf03412_468295-484851' '(at1g09870 : 657.0) histidine acid phosphatase family protein; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-2 (InterPro:IPR000560), Histidine acid phosphatase, eukaryotic (InterPro:IPR016274); Has 765 Blast hits to 755 proteins in 231 species: Archae - 0; Bacteria - 126; Metazoa - 192; Fungi - 356; Plants - 52; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|36596 : 333.0) no description available & (gnl|cdd|84696 : 140.0) no description available & (reliability: 1314.0) & (original description: Putative pco091084, Description = Acid phosphatase, PFAM = PF00328)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf03613_59065-65164' '(q09131|ppaf_soybn : 749.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (at2g16430 : 741.0) purple acid phosphatase 10 (PAP10); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 12 (TAIR:AT2G27190.1); Has 1830 Blast hits to 1814 proteins in 380 species: Archae - 3; Bacteria - 548; Metazoa - 186; Fungi - 79; Plants - 763; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (gnl|cdd|36592 : 465.0) no description available & (gnl|cdd|84562 : 93.8) no description available & (reliability: 1482.0) & (original description: Putative PAP2, Description = Purple acid phosphatase 2, PFAM = PF16656;PF14008;PF00149)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf03651_21643-29415' '(at3g10150 : 484.0) purple acid phosphatase 16 (PAP16); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Phosphoesterase At2g46880 (InterPro:IPR011230); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 28 (TAIR:AT5G57140.1); Has 563 Blast hits to 562 proteins in 197 species: Archae - 0; Bacteria - 224; Metazoa - 0; Fungi - 196; Plants - 110; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|36645 : 276.0) no description available & (reliability: 968.0) & (original description: Putative PAP16, Description = Probable inactive purple acid phosphatase 16, PFAM = PF00149)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf03755_436253-439264' '(gnl|cdd|67385 : 254.0) no description available & (at4g25150 : 234.0) HAD superfamily, subfamily IIIB acid phosphatase ; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519), Vegetative storage protein/acid phosphatase (InterPro:IPR014403), Acid phosphatase, plant (InterPro:IPR010028); BEST Arabidopsis thaliana protein match is: HAD superfamily, subfamily IIIB acid phosphatase (TAIR:AT5G51260.1); Has 924 Blast hits to 919 proteins in 287 species: Archae - 0; Bacteria - 505; Metazoa - 2; Fungi - 0; Plants - 370; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (p15490|vspa_soybn : 199.0) Stem 28 kDa glycoprotein precursor (Vegetative storage protein A) - Glycine max (Soybean) & (reliability: 468.0) & (original description: Putative APS1, Description = Acid phosphatase 1, PFAM = PF03767)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf03809_116568-122367' '(at4g25150 : 340.0) HAD superfamily, subfamily IIIB acid phosphatase ; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519), Vegetative storage protein/acid phosphatase (InterPro:IPR014403), Acid phosphatase, plant (InterPro:IPR010028); BEST Arabidopsis thaliana protein match is: HAD superfamily, subfamily IIIB acid phosphatase (TAIR:AT5G51260.1); Has 924 Blast hits to 919 proteins in 287 species: Archae - 0; Bacteria - 505; Metazoa - 2; Fungi - 0; Plants - 370; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (gnl|cdd|67385 : 294.0) no description available & (p15490|vspa_soybn : 207.0) Stem 28 kDa glycoprotein precursor (Vegetative storage protein A) - Glycine max (Soybean) & (reliability: 680.0) & (original description: Putative APS1, Description = Acid phosphatase 1, PFAM = PF03767)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf04286_10550-14073' '(at3g17790 : 439.0) purple acid phosphatase 17 (PAP17); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 3 (TAIR:AT1G14700.1); Has 1229 Blast hits to 1218 proteins in 312 species: Archae - 4; Bacteria - 345; Metazoa - 336; Fungi - 8; Plants - 191; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink). & (gnl|cdd|37890 : 435.0) no description available & (reliability: 878.0) & (original description: Putative PAP17, Description = Purple acid phosphatase 17, PFAM = PF00149)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf04335_68975-76665' '(at1g13750 : 927.0) Purple acid phosphatases superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity, metal ion binding, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Fibronectin, type III (InterPro:IPR003961), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 27 (TAIR:AT5G50400.1); Has 1802 Blast hits to 1786 proteins in 349 species: Archae - 1; Bacteria - 481; Metazoa - 191; Fungi - 77; Plants - 759; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink). & (q687e1|npp_horvu : 512.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (gnl|cdd|36592 : 348.0) no description available & (reliability: 1854.0) & (original description: Putative npp, Description = Purple acid phosphatase, PFAM = PF16656;PF14008;PF00149)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf04339_665824-675623' '(at3g20500 : 693.0) purple acid phosphatase 18 (PAP18); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 22 (TAIR:AT3G52820.1); Has 2123 Blast hits to 2103 proteins in 464 species: Archae - 3; Bacteria - 774; Metazoa - 209; Fungi - 79; Plants - 766; Viruses - 0; Other Eukaryotes - 292 (source: NCBI BLink). & (gnl|cdd|36592 : 407.0) no description available & (q09131|ppaf_soybn : 277.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (reliability: 1386.0) & (original description: Putative PAP22, Description = Purple acid phosphatase 22, PFAM = PF14008;PF16656;PF00149)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf04400_192829-200938' '(at1g13900 : 801.0) Purple acid phosphatases superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity, metal ion binding, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 9 (TAIR:AT2G03450.1); Has 1738 Blast hits to 1720 proteins in 355 species: Archae - 1; Bacteria - 507; Metazoa - 197; Fungi - 77; Plants - 727; Viruses - 0; Other Eukaryotes - 229 (source: NCBI BLink). & (gnl|cdd|36592 : 346.0) no description available & (q687e1|npp_horvu : 114.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (reliability: 1602.0) & (original description: Putative PAP2, Description = Probable inactive purple acid phosphatase 2, PFAM = PF16656;PF00149;PF14008)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf04918_20075-31571' '(at5g34850 : 731.0) Encodes a dual-targeted purple acid phosphatase isozyme AtPAP26. Involved in phosphate metabolism.; purple acid phosphatase 26 (PAP26); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: phosphate ion homeostasis; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 12 (TAIR:AT2G27190.1); Has 1843 Blast hits to 1825 proteins in 387 species: Archae - 3; Bacteria - 583; Metazoa - 186; Fungi - 81; Plants - 765; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (q09131|ppaf_soybn : 523.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (gnl|cdd|36592 : 435.0) no description available & (gnl|cdd|84562 : 85.7) no description available & (reliability: 1462.0) & (original description: Putative PAP1, Description = Purple acid phosphatase, PFAM = PF16656;PF14008;PF00149)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf05017_555351-560383' '(at2g39920 : 212.0) HAD superfamily, subfamily IIIB acid phosphatase ; FUNCTIONS IN: acid phosphatase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519); BEST Arabidopsis thaliana protein match is: HAD superfamily, subfamily IIIB acid phosphatase (TAIR:AT4G29260.1). & (gnl|cdd|67385 : 113.0) no description available & (reliability: 424.0) & (original description: Putative At2g39920, Description = Uncharacterized protein At2g39920, PFAM = PF03767)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf05051_326992-344881' '(at1g07990 : 934.0) SIT4 phosphatase-associated family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SIT4 phosphatase-associated protein (InterPro:IPR007587); BEST Arabidopsis thaliana protein match is: SIT4 phosphatase-associated family protein (TAIR:AT2G28360.1); Has 1048 Blast hits to 891 proteins in 200 species: Archae - 0; Bacteria - 31; Metazoa - 354; Fungi - 329; Plants - 109; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink). & (gnl|cdd|37284 : 572.0) no description available & (gnl|cdd|68084 : 349.0) no description available & (reliability: 1868.0) & (original description: Putative Ccrd_012273, Description = Armadillo-type fold, PFAM = PF04499;PF04499)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf05330_154727-162267' '(at1g13750 : 947.0) Purple acid phosphatases superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity, metal ion binding, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Fibronectin, type III (InterPro:IPR003961), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 27 (TAIR:AT5G50400.1); Has 1802 Blast hits to 1786 proteins in 349 species: Archae - 1; Bacteria - 481; Metazoa - 191; Fungi - 77; Plants - 759; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink). & (q687e1|npp_horvu : 516.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (gnl|cdd|36592 : 346.0) no description available & (reliability: 1894.0) & (original description: Putative npp, Description = Purple acid phosphatase, PFAM = PF16656;PF00149;PF14008)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf05627_228768-235247' '(at3g02600 : 406.0) Encodes phosphatidic acid phosphatase. Expressed during germination.; lipid phosphate phosphatase 3 (LPP3); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase 1 (TAIR:AT2G01180.1); Has 2087 Blast hits to 2082 proteins in 396 species: Archae - 13; Bacteria - 367; Metazoa - 921; Fungi - 397; Plants - 200; Viruses - 3; Other Eukaryotes - 186 (source: NCBI BLink). & (gnl|cdd|38240 : 276.0) no description available & (gnl|cdd|48094 : 241.0) no description available & (reliability: 812.0) & (original description: Putative LPP3, Description = Putative lipid phosphate phosphatase 3, chloroplastic, PFAM = PF01569)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf05627_248687-253987' '(at1g15080 : 363.0) Encodes phosphatidic acid phosphatase. Involved in ABA signaling. Functions as a negative regulator upstream of ABI4. Expressed during germination and seed development. Expressed overall in young seedlings, in roots, hypocotyls, and vascular cells of cotyledons and leaves of 10 day-old seedlings, in flower filaments and stem elongation zones. Not expressed in anthers, pollen nor petals.; lipid phosphate phosphatase 2 (LPP2); FUNCTIONS IN: acid phosphatase activity, phosphatidate phosphatase activity; INVOLVED IN: abscisic acid mediated signaling pathway; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.5); Has 2086 Blast hits to 2081 proteins in 377 species: Archae - 13; Bacteria - 320; Metazoa - 928; Fungi - 399; Plants - 199; Viruses - 3; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|38240 : 264.0) no description available & (gnl|cdd|48094 : 233.0) no description available & (reliability: 726.0) & (original description: Putative LPP2, Description = Lipid phosphate phosphatase 2, PFAM = PF01569)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf05948_210872-213753' '(at5g45700 : 213.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: phosphatase activity; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G29770.1); Has 2652 Blast hits to 2641 proteins in 258 species: Archae - 0; Bacteria - 12; Metazoa - 831; Fungi - 550; Plants - 465; Viruses - 15; Other Eukaryotes - 779 (source: NCBI BLink). & (gnl|cdd|36818 : 198.0) no description available & (gnl|cdd|47876 : 168.0) no description available & (reliability: 426.0) & (original description: Putative v1g61841, Description = Predicted protein, PFAM = PF03031)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf06091_740612-744739' '(at3g15820 : 325.0) Functions as phosphatidylcholine:diacylglycerol cholinephosphotransferase, a major reaction for the transfer of 18:1 into phosphatidylcholine for desaturation and also for the reverse transfer of 18:2 and 18:3 into the triacylglycerols synthesis pathway; REDUCED OLEATE DESATURATION 1 (ROD1); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase-related / PAP2-related (TAIR:AT3G15830.1); Has 58 Blast hits to 58 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 650.0) & (original description: Putative At3g15830, Description = Phosphatidylcholine:diacylglycerol cholinephosphotransferase 2, PFAM = )' T '26.13' 'misc.acid and other phosphatases' 'niben101scf06394_444948-451523' '(at3g02600 : 429.0) Encodes phosphatidic acid phosphatase. Expressed during germination.; lipid phosphate phosphatase 3 (LPP3); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase 1 (TAIR:AT2G01180.1); Has 2087 Blast hits to 2082 proteins in 396 species: Archae - 13; Bacteria - 367; Metazoa - 921; Fungi - 397; Plants - 200; Viruses - 3; Other Eukaryotes - 186 (source: NCBI BLink). & (gnl|cdd|38240 : 266.0) no description available & (gnl|cdd|48094 : 241.0) no description available & (reliability: 858.0) & (original description: Putative LPP3, Description = Putative lipid phosphate phosphatase 3, chloroplastic, PFAM = PF01569)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf06501_693-4474' '(at4g14930 : 200.0) Survival protein SurE-like phosphatase/nucleotidase; FUNCTIONS IN: hydrolase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Survival protein SurE-like phosphatase/nucleotidase (InterPro:IPR002828); BEST Arabidopsis thaliana protein match is: Survival protein SurE-like phosphatase/nucleotidase (TAIR:AT1G72880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 400.0) & (original description: Putative dl3505w, Description = Survival protein SurE-like phosphatase/nucleotidase, PFAM = PF01975)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf07239_67265-77302' '(at4g14930 : 323.0) Survival protein SurE-like phosphatase/nucleotidase; FUNCTIONS IN: hydrolase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Survival protein SurE-like phosphatase/nucleotidase (InterPro:IPR002828); BEST Arabidopsis thaliana protein match is: Survival protein SurE-like phosphatase/nucleotidase (TAIR:AT1G72880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80628 : 176.0) no description available & (reliability: 646.0) & (original description: Putative At4g14930, Description = At4g14930, PFAM = PF01975)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf07687_240367-243233' '(at1g04040 : 297.0) HAD superfamily, subfamily IIIB acid phosphatase ; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519), Vegetative storage protein/acid phosphatase (InterPro:IPR014403), Acid phosphatase, plant (InterPro:IPR010028); BEST Arabidopsis thaliana protein match is: HAD superfamily, subfamily IIIB acid phosphatase (TAIR:AT5G44020.1); Has 1079 Blast hits to 1077 proteins in 335 species: Archae - 0; Bacteria - 592; Metazoa - 2; Fungi - 0; Plants - 364; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink). & (gnl|cdd|67385 : 247.0) no description available & (p15490|vspa_soybn : 174.0) Stem 28 kDa glycoprotein precursor (Vegetative storage protein A) - Glycine max (Soybean) & (reliability: 594.0) & (original description: Putative BnaC08g43690D, Description = BnaC08g43690D protein, PFAM = PF03767)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf08026_303747-314428' '(at2g46920 : 543.0) Pol mutations are recessive, partial suppressors of meristem defects in strong clv1 and clv3 mutants, and nearly complete suppressors of weak clv1 mutants. Single mutants appear normal. Acts downstream of the CLV signaling pathway in meristem development and is required together with PLL1 for stem-cell maintenance through the regulation of WUS.; poltergeist (POL); FUNCTIONS IN: phospholipid binding, protein serine/threonine phosphatase activity; INVOLVED IN: protein myristoylation, regulation of meristem structural organization, protein palmitoylation, regulation of transcription, maintenance of meristem identity; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: poltergeist like 1 (TAIR:AT2G35350.1); Has 1941 Blast hits to 1802 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 375; Fungi - 295; Plants - 1017; Viruses - 0; Other Eukaryotes - 254 (source: NCBI BLink). & (gnl|cdd|35919 : 278.0) no description available & (gnl|cdd|29062 : 121.0) no description available & (reliability: 1086.0) & (original description: Putative PLL1, Description = Protein phosphatase 2C 29, PFAM = PF00481)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf08033_186406-191828' '(q09131|ppaf_soybn : 682.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (at2g27190 : 681.0) secreted purple acid phosphatase precursor; purple acid phosphatase 12 (PAP12); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: cellular response to phosphate starvation; LOCATED IN: plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 10 (TAIR:AT2G16430.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36592 : 447.0) no description available & (gnl|cdd|84562 : 91.5) no description available & (reliability: 1362.0) & (original description: Putative PAP2, Description = Purple acid phosphatase 2, PFAM = PF00149;PF14008;PF16656)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf08280_327111-334265' '(at3g07130 : 805.0) Encodes PAP15, a purple acid phosphatase with phytase activity. Expression of PAP15 is developmentally and temporally regulated, with strong expression at the early stages of seedling growth and pollen germination. The expression is also organ/tissue-specific, with strongest expression in the vasculature, pollen grains, and roots. Recombinant PAP protein exhibits broad substrate specificity with moderate phytase activity. PAP15 likely mobilizes phosphorus reserves in plants, particularly during seed and pollen germination.; purple acid phosphatase 15 (PAP15); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: pollen germination, seed germination; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: seedling growth, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 13 (TAIR:AT2G32770.3); Has 2322 Blast hits to 2305 proteins in 472 species: Archae - 7; Bacteria - 914; Metazoa - 228; Fungi - 75; Plants - 768; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (gnl|cdd|36592 : 392.0) no description available & (q09131|ppaf_soybn : 234.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (reliability: 1610.0) & (original description: Putative pap3, Description = Purple acid phosphatase, PFAM = PF14008;PF00149;PF16656)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf08478_628640-635517' '(at3g07130 : 797.0) Encodes PAP15, a purple acid phosphatase with phytase activity. Expression of PAP15 is developmentally and temporally regulated, with strong expression at the early stages of seedling growth and pollen germination. The expression is also organ/tissue-specific, with strongest expression in the vasculature, pollen grains, and roots. Recombinant PAP protein exhibits broad substrate specificity with moderate phytase activity. PAP15 likely mobilizes phosphorus reserves in plants, particularly during seed and pollen germination.; purple acid phosphatase 15 (PAP15); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: pollen germination, seed germination; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: seedling growth, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 13 (TAIR:AT2G32770.3); Has 2322 Blast hits to 2305 proteins in 472 species: Archae - 7; Bacteria - 914; Metazoa - 228; Fungi - 75; Plants - 768; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (gnl|cdd|36592 : 391.0) no description available & (q09131|ppaf_soybn : 229.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (reliability: 1594.0) & (original description: Putative PAP13, Description = Purple acid phosphatase 13, PFAM = PF00149;PF16656;PF14008)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf09260_4217-19272' '(gnl|cdd|37890 : 440.0) no description available & (at1g14700 : 414.0) purple acid phosphatase 3 (PAP3); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 8 (TAIR:AT2G01890.1); Has 1092 Blast hits to 1082 proteins in 272 species: Archae - 0; Bacteria - 250; Metazoa - 335; Fungi - 8; Plants - 191; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (reliability: 828.0) & (original description: Putative ACP5, Description = Purple acid phosphatase 3, PFAM = PF00149)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf09321_146508-149932' '(at1g73010 : 367.0) phosphate starvation-induced gene 2 (PS2); FUNCTIONS IN: phosphatase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate phosphatase, PHOSPHO2 (InterPro:IPR016965), HAD-superfamily hydrolase, subfamily IB, PSPase-like (InterPro:IPR006383), Pyridoxal phosphate phosphatase-related (InterPro:IPR006384); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate phosphatase-related protein (TAIR:AT1G17710.1); Has 357 Blast hits to 345 proteins in 104 species: Archae - 0; Bacteria - 14; Metazoa - 174; Fungi - 18; Plants - 106; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|70360 : 336.0) no description available & (gnl|cdd|38330 : 322.0) no description available & (reliability: 734.0) & (original description: Putative PS2, Description = Inorganic pyrophosphatase 1, PFAM = PF06888)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf09929_349202-357932' '(at5g34850 : 734.0) Encodes a dual-targeted purple acid phosphatase isozyme AtPAP26. Involved in phosphate metabolism.; purple acid phosphatase 26 (PAP26); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: phosphate ion homeostasis; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 12 (TAIR:AT2G27190.1); Has 1843 Blast hits to 1825 proteins in 387 species: Archae - 3; Bacteria - 583; Metazoa - 186; Fungi - 81; Plants - 765; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (q09131|ppaf_soybn : 525.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (gnl|cdd|36592 : 430.0) no description available & (gnl|cdd|84562 : 83.4) no description available & (reliability: 1468.0) & (original description: Putative pap2, Description = Purple acid phosphatase, PFAM = PF00149;PF16656;PF14008)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf09962_286356-299772' '(at3g45190 : 798.0) SIT4 phosphatase-associated family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SIT4 phosphatase-associated protein (InterPro:IPR007587); BEST Arabidopsis thaliana protein match is: SIT4 phosphatase-associated family protein (TAIR:AT1G07990.1); Has 1154 Blast hits to 1024 proteins in 229 species: Archae - 4; Bacteria - 93; Metazoa - 408; Fungi - 293; Plants - 121; Viruses - 2; Other Eukaryotes - 233 (source: NCBI BLink). & (gnl|cdd|37284 : 549.0) no description available & (gnl|cdd|68084 : 351.0) no description available & (reliability: 1596.0) & (original description: Putative Ccrd_012273, Description = Armadillo-type fold, PFAM = PF04499;PF04499)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf10169_366150-381965' '(at1g09870 : 494.0) histidine acid phosphatase family protein; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-2 (InterPro:IPR000560), Histidine acid phosphatase, eukaryotic (InterPro:IPR016274); Has 765 Blast hits to 755 proteins in 231 species: Archae - 0; Bacteria - 126; Metazoa - 192; Fungi - 356; Plants - 52; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|36596 : 274.0) no description available & (gnl|cdd|84696 : 112.0) no description available & (reliability: 988.0) & (original description: Putative pco091084, Description = Acid phosphatase, PFAM = PF00328;PF00328)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf11154_81837-93894' '(at5g34850 : 736.0) Encodes a dual-targeted purple acid phosphatase isozyme AtPAP26. Involved in phosphate metabolism.; purple acid phosphatase 26 (PAP26); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: phosphate ion homeostasis; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 12 (TAIR:AT2G27190.1); Has 1843 Blast hits to 1825 proteins in 387 species: Archae - 3; Bacteria - 583; Metazoa - 186; Fungi - 81; Plants - 765; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (q09131|ppaf_soybn : 525.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (gnl|cdd|36592 : 439.0) no description available & (gnl|cdd|84562 : 80.3) no description available & (reliability: 1472.0) & (original description: Putative PAP26, Description = Bifunctional purple acid phosphatase 26, PFAM = PF14008;PF16656;PF00149)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf12266_1044570-1048237' '(at3g15820 : 340.0) Functions as phosphatidylcholine:diacylglycerol cholinephosphotransferase, a major reaction for the transfer of 18:1 into phosphatidylcholine for desaturation and also for the reverse transfer of 18:2 and 18:3 into the triacylglycerols synthesis pathway; REDUCED OLEATE DESATURATION 1 (ROD1); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase-related / PAP2-related (TAIR:AT3G15830.1); Has 58 Blast hits to 58 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 680.0) & (original description: Putative BnaA03g57520D, Description = BnaA03g57520D protein, PFAM = PF14360)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf12653_89604-95729' '(at5g11860 : 360.0) Encodes a SCP1-like small phosphatase (SSP). Three SSPs form a unique group with long N-terminal extensions: AT5G46410 (SSP4), AT5G11860 (SSP5), AT4G18140 (SSP4b). SSP4 and SSP4b were localized exclusively in the nuclei, whereas SSP5 accumulated in both nuclei and cytoplasm. All three SSPs encodes active CTD phosphatases like animal SCP1 family proteins, with distinct substrate specificities: SSP4 and SSP4b could dephosphorylate both Ser2-PO(4) and Ser5-PO(4) of CTD, whereas SSP5 dephosphorylated only Ser5-PO(4).; SCP1-like small phosphatase 5; CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: SCP1-like small phosphatase 4 (TAIR:AT5G46410.1); Has 2780 Blast hits to 2771 proteins in 250 species: Archae - 0; Bacteria - 14; Metazoa - 839; Fungi - 559; Plants - 525; Viruses - 1; Other Eukaryotes - 842 (source: NCBI BLink). & (gnl|cdd|36818 : 249.0) no description available & (gnl|cdd|86219 : 184.0) no description available & (reliability: 720.0) & (original description: Putative NIF4, Description = Putative nuclear LIM interactor-interacting protein, PFAM = PF03031)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf13762_159875-168790' '(at3g20500 : 699.0) purple acid phosphatase 18 (PAP18); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 22 (TAIR:AT3G52820.1); Has 2123 Blast hits to 2103 proteins in 464 species: Archae - 3; Bacteria - 774; Metazoa - 209; Fungi - 79; Plants - 766; Viruses - 0; Other Eukaryotes - 292 (source: NCBI BLink). & (gnl|cdd|36592 : 409.0) no description available & (q09131|ppaf_soybn : 280.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (reliability: 1398.0) & (original description: Putative PAP18, Description = Purple acid phosphatase 18, PFAM = PF00149;PF16656;PF14008)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf13823_218258-223533' '(at5g63140 : 500.0) purple acid phosphatase 29 (PAP29); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Phosphoesterase At2g46880 (InterPro:IPR011230); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 14 (TAIR:AT2G46880.1); Has 636 Blast hits to 631 proteins in 208 species: Archae - 0; Bacteria - 277; Metazoa - 0; Fungi - 208; Plants - 117; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|36645 : 409.0) no description available & (reliability: 1000.0) & (original description: Putative PAP29, Description = Probable inactive purple acid phosphatase 29, PFAM = PF00149)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf14274_119630-135356' '(gnl|cdd|67385 : 257.0) no description available & (at4g29260 : 249.0) HAD superfamily, subfamily IIIB acid phosphatase ; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519), Vegetative storage protein/acid phosphatase (InterPro:IPR014403), Acid phosphatase, plant (InterPro:IPR010028); BEST Arabidopsis thaliana protein match is: HAD superfamily, subfamily IIIB acid phosphatase (TAIR:AT4G29270.1); Has 713 Blast hits to 710 proteins in 181 species: Archae - 0; Bacteria - 300; Metazoa - 2; Fungi - 0; Plants - 366; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (p10742|s25k_soybn : 170.0) Stem 31 kDa glycoprotein precursor (Vegetative storage protein VSP25) (Fragment) - Glycine max (Soybean) & (reliability: 498.0) & (original description: Putative bci3, Description = Acid phosphatase 1, PFAM = PF03767)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf14771_116494-126730' '(at5g50400 : 897.0) purple acid phosphatase 27 (PAP27); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 24 (TAIR:AT4G24890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q687e1|npp_horvu : 572.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (gnl|cdd|36592 : 335.0) no description available & (reliability: 1794.0) & (original description: Putative ppd4, Description = Purple acid phosphatase, PFAM = PF14008;PF00149)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf14781_106349-111540' '(gnl|cdd|37890 : 446.0) no description available & (at3g17790 : 438.0) purple acid phosphatase 17 (PAP17); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 3 (TAIR:AT1G14700.1); Has 1229 Blast hits to 1218 proteins in 312 species: Archae - 4; Bacteria - 345; Metazoa - 336; Fungi - 8; Plants - 191; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink). & (reliability: 876.0) & (original description: Putative PAP17, Description = Purple acid phosphatase 17, PFAM = PF00149)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf14799_5062-12256' '(at5g39400 : 539.0) PTEN1; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Phosphatase tensin type (InterPro:IPR014019), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Tensin phosphatase, C2 domain (InterPro:IPR014020); BEST Arabidopsis thaliana protein match is: PTEN 2 (TAIR:AT3G19420.1); Has 1458 Blast hits to 1454 proteins in 210 species: Archae - 8; Bacteria - 27; Metazoa - 855; Fungi - 236; Plants - 75; Viruses - 0; Other Eukaryotes - 257 (source: NCBI BLink). & (gnl|cdd|37494 : 256.0) no description available & (reliability: 1078.0) & (original description: Putative PTEN1, Description = Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN1, PFAM = PF10409;PF00782)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf20596_6321-10307' '(at5g03080 : 303.0) Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); Has 881 Blast hits to 875 proteins in 378 species: Archae - 15; Bacteria - 412; Metazoa - 127; Fungi - 150; Plants - 85; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (gnl|cdd|38356 : 225.0) no description available & (gnl|cdd|48087 : 150.0) no description available & (reliability: 606.0) & (original description: Putative LPPG, Description = Lipid phosphate phosphatase gamma, chloroplastic, PFAM = PF01569)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf27183_23512-26595' '(at2g38600 : 327.0) HAD superfamily, subfamily IIIB acid phosphatase ; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519), Vegetative storage protein/acid phosphatase (InterPro:IPR014403), Acid phosphatase, plant (InterPro:IPR010028); BEST Arabidopsis thaliana protein match is: HAD superfamily, subfamily IIIB acid phosphatase (TAIR:AT4G29260.1); Has 709 Blast hits to 704 proteins in 163 species: Archae - 0; Bacteria - 272; Metazoa - 0; Fungi - 0; Plants - 374; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|67385 : 248.0) no description available & (p10743|vspb_soybn : 167.0) Stem 31 kDa glycoprotein precursor (Vegetative storage protein B) - Glycine max (Soybean) & (reliability: 654.0) & (original description: Putative APS1, Description = Acid phosphatase 1, PFAM = PF03767)' T '26.13' 'misc.acid and other phosphatases' 'niben101scf34538_49825-53564' '(at1g73010 : 369.0) phosphate starvation-induced gene 2 (PS2); FUNCTIONS IN: phosphatase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate phosphatase, PHOSPHO2 (InterPro:IPR016965), HAD-superfamily hydrolase, subfamily IB, PSPase-like (InterPro:IPR006383), Pyridoxal phosphate phosphatase-related (InterPro:IPR006384); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate phosphatase-related protein (TAIR:AT1G17710.1); Has 357 Blast hits to 345 proteins in 104 species: Archae - 0; Bacteria - 14; Metazoa - 174; Fungi - 18; Plants - 106; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|70360 : 336.0) no description available & (gnl|cdd|38330 : 324.0) no description available & (reliability: 738.0) & (original description: Putative At1g17710, Description = Inorganic pyrophosphatase 2, PFAM = PF06888)' T '26.14' 'misc.oxygenases' 'nbv0.3scaffold11469_1-15368' '(at2g17970 : 281.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G36090.2). & (gnl|cdd|39378 : 161.0) no description available & (reliability: 562.0) & (original description: Putative At1g48980, Description = Putative ovule protein, PFAM = PF13532)' T '26.14' 'misc.oxygenases' 'nbv0.3scaffold36382_1-9239' '(at2g01490 : 422.0) phytanoyl-CoA dioxygenase (PhyH) family protein; FUNCTIONS IN: phytanoyl-CoA dioxygenase activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phytanoyl-CoA dioxygenase (InterPro:IPR008775); Has 2926 Blast hits to 2921 proteins in 334 species: Archae - 4; Bacteria - 485; Metazoa - 347; Fungi - 101; Plants - 64; Viruses - 0; Other Eukaryotes - 1925 (source: NCBI BLink). & (gnl|cdd|38500 : 272.0) no description available & (gnl|cdd|86931 : 157.0) no description available & (reliability: 844.0) & (original description: Putative phyhd1, Description = Phytanoyl-CoA dioxygenase domain-containing protein 1 homolog, PFAM = PF05721)' T '26.14' 'misc.oxygenases' 'nbv0.5scaffold278_887388-893715' '(at1g52800 : 307.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G52790.1); Has 6299 Blast hits to 6226 proteins in 763 species: Archae - 0; Bacteria - 707; Metazoa - 49; Fungi - 497; Plants - 4377; Viruses - 0; Other Eukaryotes - 669 (source: NCBI BLink). & (gnl|cdd|35365 : 216.0) no description available & (gnl|cdd|33294 : 111.0) no description available & (o04707|gao1a_wheat : 94.7) Gibberellin 20 oxidase 1-A (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-A) (Ta20ox1A) (TaGA20ox1-A) - Triticum aestivum (Wheat) & (reliability: 570.0) & (original description: Putative AOP1, Description = Probable 2-oxoglutarate-dependent dioxygenase AOP1, PFAM = PF03171;PF14226)' T '26.14' 'misc.oxygenases' 'nbv0.5scaffold674_505779-512432' '(at3g18210 : 457.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G22950.1); Has 407 Blast hits to 406 proteins in 80 species: Archae - 0; Bacteria - 16; Metazoa - 257; Fungi - 0; Plants - 94; Viruses - 3; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|37182 : 293.0) no description available & (gnl|cdd|47971 : 82.0) no description available & (reliability: 914.0) & (original description: Putative At1g22950, Description = Uncharacterized PKHD-type hydroxylase At1g22950, PFAM = )' T '26.14' 'misc.oxygenases' 'nbv0.5scaffold674_521166-525853' '(at3g18210 : 362.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G22950.1); Has 407 Blast hits to 406 proteins in 80 species: Archae - 0; Bacteria - 16; Metazoa - 257; Fungi - 0; Plants - 94; Viruses - 3; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|37182 : 228.0) no description available & (reliability: 724.0) & (original description: Putative At1g22950, Description = Putative PKHD-type hydroxylase, PFAM = )' T '26.14' 'misc.oxygenases' 'niben044scf00003743ctg015_500-5337' '(at3g18210 : 344.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G22950.1); Has 407 Blast hits to 406 proteins in 80 species: Archae - 0; Bacteria - 16; Metazoa - 257; Fungi - 0; Plants - 94; Viruses - 3; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|37182 : 213.0) no description available & (reliability: 688.0) & (original description: Putative At1g22950, Description = Uncharacterized PKHD-type hydroxylase At1g22950, PFAM = )' T '26.14' 'misc.oxygenases' 'niben044scf00018710ctg002_1-5473' '(at1g73680 : 930.0) Encodes an alpha dioxygenase. Recombinant protein catalyzes the conversion of a wide range of fatty acids into 2(R)-hydroperoxy derivatives.; alpha dioxygenase (ALPHA DOX2); CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Haem peroxidase, animal (InterPro:IPR002007); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G01420.1). & (gnl|cdd|37619 : 366.0) no description available & (gnl|cdd|66752 : 326.0) no description available & (reliability: 1860.0) & (original description: Putative DOX2, Description = Alpha-dioxygenase 2, PFAM = PF03098)' T '26.14' 'misc.oxygenases' 'niben101scf00188_236135-241098' '(at1g52790 : 333.0) encodes a putative oxidoreductase, 2OG-Fe(II) oxygenase family protein, similar to GS-AOP loci (GI:16118889, GI:16118887, GI:16118891, GI:16118893); contains PF03171 2OG-Fe(II) oxygenase superfamily domain; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, synergid; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G52800.1); Has 4044 Blast hits to 3977 proteins in 494 species: Archae - 0; Bacteria - 293; Metazoa - 17; Fungi - 226; Plants - 3128; Viruses - 0; Other Eukaryotes - 380 (source: NCBI BLink). & (gnl|cdd|35365 : 240.0) no description available & (gnl|cdd|33294 : 103.0) no description available & (p93771|gaox1_orysa : 81.6) Gibberellin 20 oxidase 1 (EC 1.14.11.-) (Gibberellin C-20 oxidase 1) (GA 20-oxidase 1) (Os20ox) - Oryza sativa (Rice) & (reliability: 666.0) & (original description: Putative BnaA06g37440D, Description = BnaA06g37440D protein, PFAM = PF14226;PF03171)' T '26.14' 'misc.oxygenases' 'niben101scf00878_82646-86608' '(at1g52800 : 245.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G52790.1); Has 6299 Blast hits to 6226 proteins in 763 species: Archae - 0; Bacteria - 707; Metazoa - 49; Fungi - 497; Plants - 4377; Viruses - 0; Other Eukaryotes - 669 (source: NCBI BLink). & (gnl|cdd|35365 : 191.0) no description available & (gnl|cdd|33294 : 106.0) no description available & (reliability: 450.0) & (original description: Putative AOP1, Description = Probable 2-oxoglutarate-dependent dioxygenase AOP1, PFAM = PF03171;PF14226)' T '26.14' 'misc.oxygenases' 'niben101scf01460_204994-212676' '(at3g18210 : 481.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G22950.1); Has 407 Blast hits to 406 proteins in 80 species: Archae - 0; Bacteria - 16; Metazoa - 257; Fungi - 0; Plants - 94; Viruses - 3; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|37182 : 341.0) no description available & (gnl|cdd|47971 : 90.1) no description available & (reliability: 962.0) & (original description: Putative At1g22950, Description = Uncharacterized PKHD-type hydroxylase At1g22950, PFAM = )' T '26.14' 'misc.oxygenases' 'niben101scf02122_72977-79114' '(at2g17970 : 370.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G36090.2). & (gnl|cdd|39378 : 218.0) no description available & (reliability: 740.0) & (original description: Putative At1g48980, Description = 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein, PFAM = PF13532)' T '26.14' 'misc.oxygenases' 'niben101scf02864_1149733-1155286' '(at2g17970 : 399.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G36090.2). & (gnl|cdd|39378 : 227.0) no description available & (reliability: 798.0) & (original description: Putative At1g48980, Description = 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein, PFAM = PF13532)' T '26.14' 'misc.oxygenases' 'niben101scf03735_256649-263293' '(at2g17970 : 514.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G36090.2). & (gnl|cdd|39378 : 244.0) no description available & (reliability: 1028.0) & (original description: Putative At2g17970, Description = 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein, PFAM = PF13532)' T '26.14' 'misc.oxygenases' 'niben101scf06267_338954-345391' '(at2g17970 : 514.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G36090.2). & (gnl|cdd|39378 : 241.0) no description available & (reliability: 1028.0) & (original description: Putative At2g17970, Description = 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein, PFAM = PF13532)' T '26.14' 'misc.oxygenases' 'niben101scf08884_18334-43245' '(at2g01490 : 426.0) phytanoyl-CoA dioxygenase (PhyH) family protein; FUNCTIONS IN: phytanoyl-CoA dioxygenase activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phytanoyl-CoA dioxygenase (InterPro:IPR008775); Has 2926 Blast hits to 2921 proteins in 334 species: Archae - 4; Bacteria - 485; Metazoa - 347; Fungi - 101; Plants - 64; Viruses - 0; Other Eukaryotes - 1925 (source: NCBI BLink). & (gnl|cdd|38500 : 281.0) no description available & (gnl|cdd|86931 : 162.0) no description available & (reliability: 852.0) & (original description: Putative PAHX, Description = Phytanoyl-CoA dioxygenase, PFAM = PF05721)' T '26.14' 'misc.oxygenases' 'niben101scf11131_8202-13340' '(at1g52790 : 269.0) encodes a putative oxidoreductase, 2OG-Fe(II) oxygenase family protein, similar to GS-AOP loci (GI:16118889, GI:16118887, GI:16118891, GI:16118893); contains PF03171 2OG-Fe(II) oxygenase superfamily domain; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, synergid; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G52800.1); Has 4044 Blast hits to 3977 proteins in 494 species: Archae - 0; Bacteria - 293; Metazoa - 17; Fungi - 226; Plants - 3128; Viruses - 0; Other Eukaryotes - 380 (source: NCBI BLink). & (gnl|cdd|35365 : 197.0) no description available & (gnl|cdd|33294 : 86.1) no description available & (reliability: 538.0) & (original description: Putative GAOX2, Description = Gibberellin 20 oxidase 2, PFAM = PF03171;PF14226)' T '26.14' 'misc.oxygenases' 'niben101scf13316_40772-46678' '(at1g73680 : 945.0) Encodes an alpha dioxygenase. Recombinant protein catalyzes the conversion of a wide range of fatty acids into 2(R)-hydroperoxy derivatives.; alpha dioxygenase (ALPHA DOX2); CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Haem peroxidase, animal (InterPro:IPR002007); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G01420.1). & (gnl|cdd|37619 : 374.0) no description available & (gnl|cdd|66752 : 332.0) no description available & (reliability: 1890.0) & (original description: Putative piox, Description = Putative alpha-dioxygenase, PFAM = PF03098)' T '26.14' 'misc.oxygenases' 'niben101scf13316_106737-112857' '(at1g73680 : 958.0) Encodes an alpha dioxygenase. Recombinant protein catalyzes the conversion of a wide range of fatty acids into 2(R)-hydroperoxy derivatives.; alpha dioxygenase (ALPHA DOX2); CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Haem peroxidase, animal (InterPro:IPR002007); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G01420.1). & (gnl|cdd|37619 : 386.0) no description available & (gnl|cdd|66752 : 351.0) no description available & (reliability: 1916.0) & (original description: Putative DOX2, Description = Alpha-dioxygenase 2, PFAM = PF03098)' T '26.14' 'misc.oxygenases' 'niben101scf17767_64259-68202' '(at1g52800 : 286.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G52790.1); Has 6299 Blast hits to 6226 proteins in 763 species: Archae - 0; Bacteria - 707; Metazoa - 49; Fungi - 497; Plants - 4377; Viruses - 0; Other Eukaryotes - 669 (source: NCBI BLink). & (gnl|cdd|35365 : 194.0) no description available & (gnl|cdd|33294 : 115.0) no description available & (o04706|gao1b_wheat : 85.9) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) - Triticum aestivum (Wheat) & (reliability: 530.0) & (original description: Putative AOP1, Description = Probable 2-oxoglutarate-dependent dioxygenase AOP1, PFAM = PF14226;PF03171)' T '26.15' 'misc.carbonic anhydrases' '' '' '26.16' 'misc.myrosinases-lectin-jacalin' 'nbv0.3scaffold5452_12485-17639' '(at1g12710 : 367.0) This gene is predicted to encode a protein with a PP2 domain. This domain in present in lectins found in squash and cucumber, suggesting that this protein could potentially have carbohydrate binding capabilities.; phloem protein 2-A12 (PP2-A12); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: phloem protein 2-A11 (TAIR:AT1G63090.1); Has 458 Blast hits to 452 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 456; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 732.0) & (original description: Putative P2A12, Description = F-box protein PP2-A12, PFAM = PF14299)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'nbv0.3scaffold5582_38-3093' '(gnl|cdd|84552 : 145.0) no description available & (at5g01090 : 118.0) Concanavalin A-like lectin family protein; FUNCTIONS IN: carbohydrate binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin family protein (TAIR:AT3G09190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative POPTR_0006s09600g, Description = Alpha-amylase inhibitor alpha subunit family protein, PFAM = PF00139)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'nbv0.3scaffold12541_29130-32179' '(gnl|cdd|84552 : 142.0) no description available & (at5g01090 : 122.0) Concanavalin A-like lectin family protein; FUNCTIONS IN: carbohydrate binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin family protein (TAIR:AT3G09190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative TCM_042627, Description = Concanavalin A-like lectin family protein, putative, PFAM = PF00139)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'nbv0.5scaffold102_257709-260793' '(gnl|cdd|84552 : 144.0) no description available & (at5g01090 : 115.0) Concanavalin A-like lectin family protein; FUNCTIONS IN: carbohydrate binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin family protein (TAIR:AT3G09190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative TCM_042627, Description = Concanavalin A-like lectin family protein, putative, PFAM = PF00139)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'nbv0.5scaffold2224_179533-234553' '(at5g35370 : 119.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-2 5 (TAIR:AT4G32300.1); Has 120687 Blast hits to 119102 proteins in 4782 species: Archae - 112; Bacteria - 13256; Metazoa - 44443; Fungi - 10300; Plants - 34517; Viruses - 382; Other Eukaryotes - 17677 (source: NCBI BLink). & (q39688|ep1g_dauca : 100.0) Epidermis-specific secreted glycoprotein EP1 precursor (52/54 kDa medium protein) - Daucus carota (Carrot) & (gnl|cdd|85464 : 89.6) no description available & (reliability: 238.0) & (original description: Putative BLP1, Description = Serine/threonine-protein kinase, PFAM = PF01453;PF00954)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'nbv0.5scaffold2410_52057-57211' '(at3g61060 : 360.0) phloem protein 2-A13 (PP2-A13); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 720.0) & (original description: Putative P2A12, Description = F-box protein PP2-A12, PFAM = PF14299)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'niben044scf00022029ctg001_4233-9179' '(at4g00340 : 900.0) Encodes a receptor-like protein kinase that is expressed in roots.; receptor-like protein kinase 4 (RLK4); FUNCTIONS IN: sugar binding, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 118915 Blast hits to 117390 proteins in 4385 species: Archae - 97; Bacteria - 13085; Metazoa - 43904; Fungi - 9417; Plants - 35014; Viruses - 433; Other Eukaryotes - 16965 (source: NCBI BLink). & (gnl|cdd|36401 : 319.0) no description available & (p17801|kpro_maize : 246.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 168.0) no description available & (reliability: 1800.0) & (original description: Putative SD22, Description = G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2, PFAM = PF08276;PF00069;PF00954;PF01453)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'niben044scf00057692ctg000_16240-20976' '(at4g00340 : 903.0) Encodes a receptor-like protein kinase that is expressed in roots.; receptor-like protein kinase 4 (RLK4); FUNCTIONS IN: sugar binding, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 118915 Blast hits to 117390 proteins in 4385 species: Archae - 97; Bacteria - 13085; Metazoa - 43904; Fungi - 9417; Plants - 35014; Viruses - 433; Other Eukaryotes - 16965 (source: NCBI BLink). & (gnl|cdd|36401 : 321.0) no description available & (p17801|kpro_maize : 244.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 167.0) no description available & (reliability: 1806.0) & (original description: Putative SD22, Description = G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2, PFAM = PF01453;PF00954;PF00069)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf00031_184937-187830' '(q39688|ep1g_dauca : 268.0) Epidermis-specific secreted glycoprotein EP1 precursor (52/54 kDa medium protein) - Daucus carota (Carrot) & (at1g78830 : 246.0) Curculin-like (mannose-binding) lectin family protein; FUNCTIONS IN: sugar binding; LOCATED IN: apoplast, cell wall, plasma membrane, plant-type cell wall; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227); BEST Arabidopsis thaliana protein match is: D-mannose binding lectin protein with Apple-like carbohydrate-binding domain (TAIR:AT1G78820.1); Has 2662 Blast hits to 2603 proteins in 85 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 2651; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|28910 : 98.8) no description available & (reliability: 492.0) & (original description: Putative MBL2, Description = Mannose-binding lectin, PFAM = PF01453)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf00031_227933-230826' '(q39688|ep1g_dauca : 291.0) Epidermis-specific secreted glycoprotein EP1 precursor (52/54 kDa medium protein) - Daucus carota (Carrot) & (at1g78830 : 266.0) Curculin-like (mannose-binding) lectin family protein; FUNCTIONS IN: sugar binding; LOCATED IN: apoplast, cell wall, plasma membrane, plant-type cell wall; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227); BEST Arabidopsis thaliana protein match is: D-mannose binding lectin protein with Apple-like carbohydrate-binding domain (TAIR:AT1G78820.1); Has 2662 Blast hits to 2603 proteins in 85 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 2651; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|28910 : 107.0) no description available & (reliability: 532.0) & (original description: Putative MBL1, Description = Mannose-binding lectin, PFAM = PF01453)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf00812_189647-194118' '(at3g61060 : 324.0) phloem protein 2-A13 (PP2-A13); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 648.0) & (original description: Putative PP2A13, Description = F-box protein PP2-A13, PFAM = PF00646;PF14299)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf01555_212572-217212' '(p17801|kpro_maize : 572.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (at4g00340 : 342.0) Encodes a receptor-like protein kinase that is expressed in roots.; receptor-like protein kinase 4 (RLK4); FUNCTIONS IN: sugar binding, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 118915 Blast hits to 117390 proteins in 4385 species: Archae - 97; Bacteria - 13085; Metazoa - 43904; Fungi - 9417; Plants - 35014; Viruses - 433; Other Eukaryotes - 16965 (source: NCBI BLink). & (gnl|cdd|36401 : 299.0) no description available & (gnl|cdd|84488 : 165.0) no description available & (reliability: 684.0) & (original description: Putative PGSC0003DMG400003313, Description = Serine/threonine-protein kinase, PFAM = PF00954;PF01453;PF00069)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf01696_722339-726711' '(at1g34300 : 363.0) lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 120498 Blast hits to 118775 proteins in 4615 species: Archae - 117; Bacteria - 12995; Metazoa - 44949; Fungi - 10067; Plants - 34445; Viruses - 432; Other Eukaryotes - 17493 (source: NCBI BLink). & (p17801|kpro_maize : 330.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|36401 : 316.0) no description available & (gnl|cdd|84488 : 169.0) no description available & (reliability: 656.0) & (original description: Putative Os10g0101000, Description = Serine/threonine-protein kinase, PFAM = PF01453;PF00069;PF00954)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf01764_91804-94682' '(at1g73040 : 206.0) Mannose-binding lectin superfamily protein; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT1G19715.2); Has 1381 Blast hits to 855 proteins in 48 species: Archae - 0; Bacteria - 13; Metazoa - 1; Fungi - 0; Plants - 1366; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|85437 : 106.0) no description available & (reliability: 412.0) & (original description: Putative JAL19, Description = Jacalin-related lectin 19, PFAM = PF01419)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf02174_381616-385718' '(at4g19840 : 191.0) encodes a phloem lectin, similar to phloem lectin in cucumber and celery. Gene is expressed in the phloem, predominantly in the companion cells.; phloem protein 2-A1 (PP2-A1); BEST Arabidopsis thaliana protein match is: phloem protein 2-A4 (TAIR:AT1G33920.1); Has 488 Blast hits to 483 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 488; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative PP2A1, Description = Protein PHLOEM PROTEIN 2-LIKE A1, PFAM = PF14299)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf02753_56446-59531' '(at5g01090 : 194.0) Concanavalin A-like lectin family protein; FUNCTIONS IN: carbohydrate binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin family protein (TAIR:AT3G09190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84552 : 169.0) no description available & (reliability: 388.0) & (original description: Putative glysoja_040215, Description = L-type lectin-domain containing receptor kinase VIII.2, PFAM = PF00139)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf03436_326771-332733' '(at1g12710 : 360.0) This gene is predicted to encode a protein with a PP2 domain. This domain in present in lectins found in squash and cucumber, suggesting that this protein could potentially have carbohydrate binding capabilities.; phloem protein 2-A12 (PP2-A12); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: phloem protein 2-A11 (TAIR:AT1G63090.1); Has 458 Blast hits to 452 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 456; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 716.0) & (original description: Putative P2A12, Description = F-box protein PP2-A12, PFAM = PF14299)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf04113_1092691-1095322' '(at1g19715 : 102.0) Mannose-binding lectin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT1G73040.1). & (reliability: 204.0) & (original description: Putative , Description = Mannose-binding lectin superfamily protein, putative isoform 1, PFAM = PF01419)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf04655_426114-430583' '(at1g19715 : 154.0) Mannose-binding lectin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT1G73040.1). & (gnl|cdd|85437 : 83.3) no description available & (reliability: 308.0) & (original description: Putative , Description = CCA, PFAM = PF01419;PF01419)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf05017_202887-205936' '(gnl|cdd|84552 : 142.0) no description available & (at5g01090 : 122.0) Concanavalin A-like lectin family protein; FUNCTIONS IN: carbohydrate binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin family protein (TAIR:AT3G09190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative TCM_042627, Description = Concanavalin A-like lectin family protein, putative, PFAM = PF00139)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf05137_292193-296604' '(p17801|kpro_maize : 689.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (at1g34300 : 360.0) lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 120498 Blast hits to 118775 proteins in 4615 species: Archae - 117; Bacteria - 12995; Metazoa - 44949; Fungi - 10067; Plants - 34445; Viruses - 432; Other Eukaryotes - 17493 (source: NCBI BLink). & (gnl|cdd|36401 : 278.0) no description available & (gnl|cdd|84488 : 173.0) no description available & (reliability: 648.0) & (original description: Putative PK1, Description = Putative receptor protein kinase ZmPK1, PFAM = PF14295;PF00069;PF01453;PF00954)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf06236_417618-421805' '(at3g61060 : 362.0) phloem protein 2-A13 (PP2-A13); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 724.0) & (original description: Putative PP2A13, Description = F-box protein PP2-A13, PFAM = PF14299;PF00646)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf06553_17053-22276' '(at1g19715 : 107.0) Mannose-binding lectin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT1G73040.1). & (gnl|cdd|85437 : 82.6) no description available & (reliability: 214.0) & (original description: Putative , Description = , PFAM = PF01419;PF01419)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf06686_86742-92771' '(at1g19715 : 417.0) Mannose-binding lectin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT1G73040.1). & (gnl|cdd|85437 : 121.0) no description available & (reliability: 834.0) & (original description: Putative JAL3, Description = Jacalin-related lectin 3, PFAM = PF01419;PF01419;PF01419)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf07844_118799-128016' '(at3g61060 : 384.0) phloem protein 2-A13 (PP2-A13); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 768.0) & (original description: Putative P2A12, Description = AtPP2-A11, PFAM = PF14299;PF00646)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf08508_282409-286884' '(at3g61060 : 385.0) phloem protein 2-A13 (PP2-A13); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 770.0) & (original description: Putative PP2A13, Description = F-box protein PP2-A13, PFAM = PF14299)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf10753_37487-42168' '(at1g12710 : 369.0) This gene is predicted to encode a protein with a PP2 domain. This domain in present in lectins found in squash and cucumber, suggesting that this protein could potentially have carbohydrate binding capabilities.; phloem protein 2-A12 (PP2-A12); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: phloem protein 2-A11 (TAIR:AT1G63090.1); Has 458 Blast hits to 452 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 456; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 708.0) & (original description: Putative P2A12, Description = F-box protein PP2-A12, PFAM = PF14299)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf13617_12970-20080' '(at2g41890 : 654.0) curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein; FUNCTIONS IN: sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: lectin protein kinase family protein (TAIR:AT1G34300.1); Has 27641 Blast hits to 27042 proteins in 566 species: Archae - 0; Bacteria - 139; Metazoa - 3969; Fungi - 187; Plants - 22616; Viruses - 64; Other Eukaryotes - 666 (source: NCBI BLink). & (gnl|cdd|36401 : 192.0) no description available & (p17801|kpro_maize : 112.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 87.9) no description available & (reliability: 1308.0) & (original description: Putative SD31, Description = G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1, PFAM = PF01453;PF00954;PF07714;PF00024)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf19932_100731-105137' '(at3g61060 : 314.0) phloem protein 2-A13 (PP2-A13); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 628.0) & (original description: Putative P2A12, Description = AtPP2-A11, PFAM = PF14299;PF00646)' T '26.16' 'misc.myrosinases-lectin-jacalin' 'niben101scf22134_151758-155762' '(at3g61060 : 382.0) phloem protein 2-A13 (PP2-A13); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 764.0) & (original description: Putative P2A12, Description = AtPP2-A11, PFAM = PF14299)' T '26.17' 'misc.dynamin' 'nbv0.3scaffold1245_23857-39664' '(at4g33650 : 1073.0) Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B.; dynamin-related protein 3A (DRP3A); CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase region, conserved site (InterPro:IPR019762), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: dynamin related protein (TAIR:AT2G14120.1). & (gnl|cdd|35667 : 606.0) no description available & (gnl|cdd|64873 : 344.0) no description available & (reliability: 2146.0) & (original description: Putative DRP3A, Description = Dynamin-related protein 3A, PFAM = PF02212;PF00350;PF01031)' T '26.17' 'misc.dynamin' 'nbv0.3scaffold31775_1-13551' '(at3g19720 : 1147.0) Encodes a novel chloroplast division protein. Mutants of exhibit defects in chloroplast constriction, have enlarged, dumbbell-shaped chloroplasts. The ARC5 gene product shares similarity with the dynamin family of GTPases, which mediate endocytosis, mitochondrial division, and other organellar fission and fusion events in eukaryotes. Phylogenetic analysis showed that ARC5 is related to a group of dynamin-like proteins unique to plants. A GFPñARC5 fusion protein localizes to a ring at the chloroplast division site. Chloroplast import and protease protection assays indicate that the ARC5 ring is positioned on the outer surface of the chloroplast. Facilitates separation of the two daughter chloroplasts.; ACCUMULATION AND REPLICATION OF CHLOROPLAST 5 (ARC5); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: chloroplast fission, peroxisome fission; LOCATED IN: chloroplast outer membrane, peroxisome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin, GTPase domain (InterPro:IPR001401); BEST Arabidopsis thaliana protein match is: Dynamin related protein 5A (TAIR:AT1G53140.1). & (gnl|cdd|35667 : 228.0) no description available & (gnl|cdd|84713 : 123.0) no description available & (reliability: 2294.0) & (original description: Putative ARC5, Description = Dynamin-like protein ARC5, PFAM = PF00350)' T '26.17' 'misc.dynamin' 'nbv0.3scaffold68704_1-3590' '(at1g59610 : 227.0) A high molecular weight GTPase whose GTP-binding domain shows a low homology to those of other plant dynamin-like proteins.Contains a pleckstrin homologous domain. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis.; dynamin-like 3 (DL3); FUNCTIONS IN: protein binding, clathrin binding, GTPase activity; INVOLVED IN: synaptic vesicle endocytosis; LOCATED IN: clathrin-coated endocytic vesicle, plasma membrane, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Pleckstrin homology-type (InterPro:IPR011993), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: dynamin-like protein 6 (TAIR:AT1G10290.1); Has 3314 Blast hits to 3127 proteins in 342 species: Archae - 0; Bacteria - 101; Metazoa - 1476; Fungi - 678; Plants - 726; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|35667 : 80.0) no description available & (reliability: 454.0) & (original description: Putative ADL6, Description = Dynamin-2B, PFAM = )' T '26.17' 'misc.dynamin' 'nbv0.3scaffold71071_3432-8375' '(at1g14830 : 247.0) Encodes a dynamin-like protein that is involved in mitochondrial morphogenesis and pollen development. Protein is localized as speckles in the cytoplasm, partially co-localizes with mitochondrial markers, cell plate of dividing cells, and the tip of root hairs, root cap cells, and expanding part of trichoblasts.; DYNAMIN-like 1C (DL1C); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: mitochondrial fission, pollen maturation, mitochondrion organization; LOCATED IN: cell cortex, plasma membrane, membrane, cell plate; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1E (TAIR:AT3G60190.1); Has 2810 Blast hits to 2715 proteins in 313 species: Archae - 2; Bacteria - 34; Metazoa - 1054; Fungi - 805; Plants - 579; Viruses - 0; Other Eukaryotes - 336 (source: NCBI BLink). & (gnl|cdd|35667 : 179.0) no description available & (gnl|cdd|47402 : 160.0) no description available & (reliability: 494.0) & (original description: Putative dnm1, Description = Dynamin, PFAM = PF00350)' T '26.17' 'misc.dynamin' 'nbv0.3scaffold71816_669-6552' '(at1g14830 : 417.0) Encodes a dynamin-like protein that is involved in mitochondrial morphogenesis and pollen development. Protein is localized as speckles in the cytoplasm, partially co-localizes with mitochondrial markers, cell plate of dividing cells, and the tip of root hairs, root cap cells, and expanding part of trichoblasts.; DYNAMIN-like 1C (DL1C); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: mitochondrial fission, pollen maturation, mitochondrion organization; LOCATED IN: cell cortex, plasma membrane, membrane, cell plate; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1E (TAIR:AT3G60190.1); Has 2810 Blast hits to 2715 proteins in 313 species: Archae - 2; Bacteria - 34; Metazoa - 1054; Fungi - 805; Plants - 579; Viruses - 0; Other Eukaryotes - 336 (source: NCBI BLink). & (gnl|cdd|35667 : 189.0) no description available & (gnl|cdd|65951 : 88.3) no description available & (reliability: 834.0) & (original description: Putative ADL1, Description = Dynamin, PFAM = PF02212;PF01031)' T '26.17' 'misc.dynamin' 'nbv0.5scaffold1585_150194-168884' '(at1g59610 : 1118.0) A high molecular weight GTPase whose GTP-binding domain shows a low homology to those of other plant dynamin-like proteins.Contains a pleckstrin homologous domain. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis.; dynamin-like 3 (DL3); FUNCTIONS IN: protein binding, clathrin binding, GTPase activity; INVOLVED IN: synaptic vesicle endocytosis; LOCATED IN: clathrin-coated endocytic vesicle, plasma membrane, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Pleckstrin homology-type (InterPro:IPR011993), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: dynamin-like protein 6 (TAIR:AT1G10290.1); Has 3314 Blast hits to 3127 proteins in 342 species: Archae - 0; Bacteria - 101; Metazoa - 1476; Fungi - 678; Plants - 726; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|35667 : 250.0) no description available & (gnl|cdd|84713 : 113.0) no description available & (reliability: 2236.0) & (original description: Putative DRP2A, Description = Dynamin-2A, PFAM = PF00169;PF02212;PF00350;PF01031)' T '26.17' 'misc.dynamin' 'nbv0.5scaffold1786_334361-375674' '(at4g33650 : 171.0) Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B.; dynamin-related protein 3A (DRP3A); CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase region, conserved site (InterPro:IPR019762), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: dynamin related protein (TAIR:AT2G14120.1). & (gnl|cdd|65951 : 89.5) no description available & (gnl|cdd|35667 : 83.9) no description available & (reliability: 342.0) & (original description: Putative ADL2, Description = Dynamin-related protein 3A, PFAM = PF02212)' T '26.17' 'misc.dynamin' 'nbv0.5scaffold1786_335671-401299' '(at4g33650 : 826.0) Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B.; dynamin-related protein 3A (DRP3A); CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase region, conserved site (InterPro:IPR019762), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: dynamin related protein (TAIR:AT2G14120.1). & (gnl|cdd|35667 : 550.0) no description available & (gnl|cdd|64873 : 305.0) no description available & (reliability: 1652.0) & (original description: Putative DRP3A, Description = Dynamin-related protein 3A, PFAM = PF00350;PF01031;PF02212)' T '26.17' 'misc.dynamin' 'nbv0.5scaffold3186_113632-130180' '(at3g60190 : 984.0) At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central ëdynamin 2ë domain and a C-terminal GTPase effector domain (GED), a typical structure for plant dynamin-related proteins. However, this class lacks a PH domain and a proline-rich domain, which are found in classical animal dynamin-like proteins. Based on work on animal dynamins, the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles, processes that are essential to vesicle trafficking and membrane compartmentalization. The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E. edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection.; DYNAMIN-like 1E (DL1E); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: response to cadmium ion, vesicle-mediated transport, defense response to fungus; LOCATED IN: mitochondrion, plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1D (TAIR:AT2G44590.3); Has 2915 Blast hits to 2753 proteins in 324 species: Archae - 2; Bacteria - 53; Metazoa - 1058; Fungi - 869; Plants - 577; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink). & (gnl|cdd|35667 : 577.0) no description available & (gnl|cdd|47402 : 252.0) no description available & (reliability: 1968.0) & (original description: Putative DRP1E, Description = Dynamin-related protein 1E, PFAM = PF01031;PF00350;PF02212)' T '26.17' 'misc.dynamin' 'niben044scf00005397ctg007_1-4165' '(at1g59610 : 451.0) A high molecular weight GTPase whose GTP-binding domain shows a low homology to those of other plant dynamin-like proteins.Contains a pleckstrin homologous domain. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis.; dynamin-like 3 (DL3); FUNCTIONS IN: protein binding, clathrin binding, GTPase activity; INVOLVED IN: synaptic vesicle endocytosis; LOCATED IN: clathrin-coated endocytic vesicle, plasma membrane, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Pleckstrin homology-type (InterPro:IPR011993), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: dynamin-like protein 6 (TAIR:AT1G10290.1); Has 3314 Blast hits to 3127 proteins in 342 species: Archae - 0; Bacteria - 101; Metazoa - 1476; Fungi - 678; Plants - 726; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|35667 : 157.0) no description available & (gnl|cdd|84713 : 103.0) no description available & (reliability: 902.0) & (original description: Putative ADL6, Description = Dynamin-2B, PFAM = PF00350)' T '26.17' 'misc.dynamin' 'niben044scf00011538ctg003_255-4352' '(at1g59610 : 295.0) A high molecular weight GTPase whose GTP-binding domain shows a low homology to those of other plant dynamin-like proteins.Contains a pleckstrin homologous domain. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis.; dynamin-like 3 (DL3); FUNCTIONS IN: protein binding, clathrin binding, GTPase activity; INVOLVED IN: synaptic vesicle endocytosis; LOCATED IN: clathrin-coated endocytic vesicle, plasma membrane, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Pleckstrin homology-type (InterPro:IPR011993), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: dynamin-like protein 6 (TAIR:AT1G10290.1); Has 3314 Blast hits to 3127 proteins in 342 species: Archae - 0; Bacteria - 101; Metazoa - 1476; Fungi - 678; Plants - 726; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink). & (reliability: 590.0) & (original description: Putative ADL6, Description = Dynamin-2B, PFAM = PF02212)' T '26.17' 'misc.dynamin' 'niben044scf00056353ctg001_1479-7272' '(at3g60190 : 914.0) At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central ëdynamin 2ë domain and a C-terminal GTPase effector domain (GED), a typical structure for plant dynamin-related proteins. However, this class lacks a PH domain and a proline-rich domain, which are found in classical animal dynamin-like proteins. Based on work on animal dynamins, the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles, processes that are essential to vesicle trafficking and membrane compartmentalization. The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E. edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection.; DYNAMIN-like 1E (DL1E); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: response to cadmium ion, vesicle-mediated transport, defense response to fungus; LOCATED IN: mitochondrion, plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1D (TAIR:AT2G44590.3); Has 2915 Blast hits to 2753 proteins in 324 species: Archae - 2; Bacteria - 53; Metazoa - 1058; Fungi - 869; Plants - 577; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink). & (gnl|cdd|35667 : 528.0) no description available & (gnl|cdd|47402 : 234.0) no description available & (reliability: 1828.0) & (original description: Putative DRP1E, Description = Dynamin-related protein 1E, PFAM = PF02212;PF01031;PF00350)' T '26.17' 'misc.dynamin' 'niben101scf00062_15090-29023' '(at4g33650 : 1057.0) Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B.; dynamin-related protein 3A (DRP3A); CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase region, conserved site (InterPro:IPR019762), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: dynamin related protein (TAIR:AT2G14120.1). & (gnl|cdd|35667 : 538.0) no description available & (gnl|cdd|64873 : 342.0) no description available & (reliability: 2114.0) & (original description: Putative DRP3A, Description = Dynamin-related protein 3A, PFAM = PF02212;PF00350;PF01031)' T '26.17' 'misc.dynamin' 'niben101scf00062_26613-29053' '(at2g14120 : 143.0) Encodes a dynamin related protein. DRPs are self-assembling GTPasse involved in fission and fusion of membranes. DRP3B functions in mitochondrion and peroxisome fission in combination with DRP3A.; dynamin related protein (DRP3B); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: post-embryonic development, peroxisome fission, mitochondrial fission; LOCATED IN: mitochondrion, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: dynamin-related protein 3A (TAIR:AT4G33650.1); Has 2998 Blast hits to 2775 proteins in 332 species: Archae - 0; Bacteria - 6; Metazoa - 1280; Fungi - 797; Plants - 522; Viruses - 0; Other Eukaryotes - 393 (source: NCBI BLink). & (gnl|cdd|35667 : 122.0) no description available & (gnl|cdd|47402 : 110.0) no description available & (reliability: 286.0) & (original description: Putative DYN1, Description = DYN1, PFAM = PF00350)' T '26.17' 'misc.dynamin' 'niben101scf00218_240160-248868' '(at3g60190 : 959.0) At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central ëdynamin 2ë domain and a C-terminal GTPase effector domain (GED), a typical structure for plant dynamin-related proteins. However, this class lacks a PH domain and a proline-rich domain, which are found in classical animal dynamin-like proteins. Based on work on animal dynamins, the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles, processes that are essential to vesicle trafficking and membrane compartmentalization. The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E. edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection.; DYNAMIN-like 1E (DL1E); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: response to cadmium ion, vesicle-mediated transport, defense response to fungus; LOCATED IN: mitochondrion, plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1D (TAIR:AT2G44590.3); Has 2915 Blast hits to 2753 proteins in 324 species: Archae - 2; Bacteria - 53; Metazoa - 1058; Fungi - 869; Plants - 577; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink). & (gnl|cdd|35667 : 557.0) no description available & (gnl|cdd|47402 : 248.0) no description available & (reliability: 1918.0) & (original description: Putative DRP1E, Description = Dynamin-related protein 1E, PFAM = PF01031;PF02212;PF00350)' T '26.17' 'misc.dynamin' 'niben101scf01006_311786-332996' '(at5g42080 : 1014.0) Encodes a dynamin-like protein related to phragmoplastin. Mutations in this gene, in combination with mutation in ADL1E, result in defects in embryogenesis, cell plate formation and trichome branching. Also controls vascular patterning in combination with VAN3 and GNOM. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis.; dynamin-like protein (DL1); CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1B (TAIR:AT3G61760.1). & (gnl|cdd|35667 : 562.0) no description available & (gnl|cdd|64873 : 270.0) no description available & (reliability: 1990.0) & (original description: Putative dnm1, Description = Dynamin, PFAM = PF02212;PF00350;PF01031)' T '26.17' 'misc.dynamin' 'niben101scf01175_267246-273757' '(at1g53140 : 1147.0) Encodes DRP5A, a dynamin protein involved in cytokinesis in Arabidopsis.; Dynamin related protein 5A (DRP5A); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: cytokinesis; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin, GTPase domain (InterPro:IPR001401); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G19720.1); Has 2347 Blast hits to 2342 proteins in 280 species: Archae - 0; Bacteria - 0; Metazoa - 1001; Fungi - 589; Plants - 464; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink). & (gnl|cdd|35667 : 284.0) no description available & (gnl|cdd|84713 : 120.0) no description available & (reliability: 2294.0) & (original description: Putative DRP5A, Description = Dynamin-related protein 5A, PFAM = PF00350)' T '26.17' 'misc.dynamin' 'niben101scf02057_67518-149481' '(at4g33650 : 482.0) Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B.; dynamin-related protein 3A (DRP3A); CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase region, conserved site (InterPro:IPR019762), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: dynamin related protein (TAIR:AT2G14120.1). & (gnl|cdd|35667 : 296.0) no description available & (gnl|cdd|64873 : 267.0) no description available & (reliability: 964.0) & (original description: Putative ADL2, Description = Dynamin-related protein 3A, PFAM = PF01031;PF00350;PF02212)' T '26.17' 'misc.dynamin' 'niben101scf02057_101992-150791' '(at4g33650 : 171.0) Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B.; dynamin-related protein 3A (DRP3A); CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase region, conserved site (InterPro:IPR019762), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: dynamin related protein (TAIR:AT2G14120.1). & (gnl|cdd|65951 : 89.5) no description available & (gnl|cdd|35667 : 83.9) no description available & (reliability: 342.0) & (original description: Putative ADL2, Description = Dynamin-related protein 3A, PFAM = PF02212)' T '26.17' 'misc.dynamin' 'niben101scf02211_154773-174277' '(at1g14830 : 1031.0) Encodes a dynamin-like protein that is involved in mitochondrial morphogenesis and pollen development. Protein is localized as speckles in the cytoplasm, partially co-localizes with mitochondrial markers, cell plate of dividing cells, and the tip of root hairs, root cap cells, and expanding part of trichoblasts.; DYNAMIN-like 1C (DL1C); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: mitochondrial fission, pollen maturation, mitochondrion organization; LOCATED IN: cell cortex, plasma membrane, membrane, cell plate; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1E (TAIR:AT3G60190.1); Has 2810 Blast hits to 2715 proteins in 313 species: Archae - 2; Bacteria - 34; Metazoa - 1054; Fungi - 805; Plants - 579; Viruses - 0; Other Eukaryotes - 336 (source: NCBI BLink). & (gnl|cdd|35667 : 578.0) no description available & (gnl|cdd|47402 : 258.0) no description available & (reliability: 2062.0) & (original description: Putative DRP1C, Description = Dynamin-related protein 1C, PFAM = PF02212;PF00350;PF01031)' T '26.17' 'misc.dynamin' 'niben101scf02240_653511-667435' '(at3g60190 : 922.0) At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central ëdynamin 2ë domain and a C-terminal GTPase effector domain (GED), a typical structure for plant dynamin-related proteins. However, this class lacks a PH domain and a proline-rich domain, which are found in classical animal dynamin-like proteins. Based on work on animal dynamins, the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles, processes that are essential to vesicle trafficking and membrane compartmentalization. The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E. edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection.; DYNAMIN-like 1E (DL1E); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: response to cadmium ion, vesicle-mediated transport, defense response to fungus; LOCATED IN: mitochondrion, plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1D (TAIR:AT2G44590.3); Has 2915 Blast hits to 2753 proteins in 324 species: Archae - 2; Bacteria - 53; Metazoa - 1058; Fungi - 869; Plants - 577; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink). & (gnl|cdd|35667 : 533.0) no description available & (gnl|cdd|47402 : 218.0) no description available & (reliability: 1844.0) & (original description: Putative drp1, Description = Dynamin, PFAM = PF02212;PF01031;PF00350)' T '26.17' 'misc.dynamin' 'niben101scf03357_1-14256' '(at4g33650 : 1077.0) Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B.; dynamin-related protein 3A (DRP3A); CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase region, conserved site (InterPro:IPR019762), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: dynamin related protein (TAIR:AT2G14120.1). & (gnl|cdd|35667 : 609.0) no description available & (gnl|cdd|64873 : 344.0) no description available & (reliability: 2154.0) & (original description: Putative DRP3A, Description = Dynamin-related protein 3A, PFAM = PF00350;PF01031;PF02212)' T '26.17' 'misc.dynamin' 'niben101scf04632_618840-622831' '(at1g60500 : 694.0) Dynamin related protein 4C (DRP4C); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: egg cell; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375), Interferon-induced Mx protein (InterPro:IPR015577); BEST Arabidopsis thaliana protein match is: Dynamin related protein 4A (TAIR:AT1G60530.1); Has 2653 Blast hits to 2628 proteins in 285 species: Archae - 0; Bacteria - 0; Metazoa - 1034; Fungi - 820; Plants - 506; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink). & (gnl|cdd|35667 : 343.0) no description available & (gnl|cdd|47402 : 173.0) no description available & (reliability: 1388.0) & (original description: Putative Os03g0260000, Description = Dynamin family protein, putative, expressed, PFAM = PF00350;PF02212;PF01031)' T '26.17' 'misc.dynamin' 'niben101scf06437_715204-734953' '(at1g59610 : 1166.0) A high molecular weight GTPase whose GTP-binding domain shows a low homology to those of other plant dynamin-like proteins.Contains a pleckstrin homologous domain. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis.; dynamin-like 3 (DL3); FUNCTIONS IN: protein binding, clathrin binding, GTPase activity; INVOLVED IN: synaptic vesicle endocytosis; LOCATED IN: clathrin-coated endocytic vesicle, plasma membrane, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Pleckstrin homology-type (InterPro:IPR011993), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: dynamin-like protein 6 (TAIR:AT1G10290.1); Has 3314 Blast hits to 3127 proteins in 342 species: Archae - 0; Bacteria - 101; Metazoa - 1476; Fungi - 678; Plants - 726; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|35667 : 273.0) no description available & (gnl|cdd|84713 : 113.0) no description available & (reliability: 2332.0) & (original description: Putative DRP2A, Description = Dynamin-2A, PFAM = PF02212;PF00350;PF00169;PF01031)' T '26.17' 'misc.dynamin' 'niben101scf07355_148202-152241' '(at1g60500 : 744.0) Dynamin related protein 4C (DRP4C); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: egg cell; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375), Interferon-induced Mx protein (InterPro:IPR015577); BEST Arabidopsis thaliana protein match is: Dynamin related protein 4A (TAIR:AT1G60530.1); Has 2653 Blast hits to 2628 proteins in 285 species: Archae - 0; Bacteria - 0; Metazoa - 1034; Fungi - 820; Plants - 506; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink). & (gnl|cdd|35667 : 345.0) no description available & (gnl|cdd|47402 : 171.0) no description available & (reliability: 1488.0) & (original description: Putative DRP4C, Description = Dynamin-related protein 4C, PFAM = PF02212;PF00350;PF01031)' T '26.17' 'misc.dynamin' 'niben101scf08364_15001-29459' '(at3g19720 : 1177.0) Encodes a novel chloroplast division protein. Mutants of exhibit defects in chloroplast constriction, have enlarged, dumbbell-shaped chloroplasts. The ARC5 gene product shares similarity with the dynamin family of GTPases, which mediate endocytosis, mitochondrial division, and other organellar fission and fusion events in eukaryotes. Phylogenetic analysis showed that ARC5 is related to a group of dynamin-like proteins unique to plants. A GFPñARC5 fusion protein localizes to a ring at the chloroplast division site. Chloroplast import and protease protection assays indicate that the ARC5 ring is positioned on the outer surface of the chloroplast. Facilitates separation of the two daughter chloroplasts.; ACCUMULATION AND REPLICATION OF CHLOROPLAST 5 (ARC5); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: chloroplast fission, peroxisome fission; LOCATED IN: chloroplast outer membrane, peroxisome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin, GTPase domain (InterPro:IPR001401); BEST Arabidopsis thaliana protein match is: Dynamin related protein 5A (TAIR:AT1G53140.1). & (gnl|cdd|35667 : 242.0) no description available & (gnl|cdd|84713 : 123.0) no description available & (reliability: 2354.0) & (original description: Putative ARC5, Description = Dynamin-like protein ARC5, PFAM = PF00350)' T '26.17' 'misc.dynamin' 'niben101scf08690_174855-189561' '(at5g42080 : 1033.0) Encodes a dynamin-like protein related to phragmoplastin. Mutations in this gene, in combination with mutation in ADL1E, result in defects in embryogenesis, cell plate formation and trichome branching. Also controls vascular patterning in combination with VAN3 and GNOM. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis.; dynamin-like protein (DL1); CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1B (TAIR:AT3G61760.1). & (gnl|cdd|35667 : 576.0) no description available & (gnl|cdd|64873 : 268.0) no description available & (reliability: 2008.0) & (original description: Putative dnm1, Description = Dynamin, PFAM = PF02212;PF01031;PF00350)' T '26.17' 'misc.dynamin' 'niben101scf09472_299724-306731' '(at1g59610 : 497.0) A high molecular weight GTPase whose GTP-binding domain shows a low homology to those of other plant dynamin-like proteins.Contains a pleckstrin homologous domain. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis.; dynamin-like 3 (DL3); FUNCTIONS IN: protein binding, clathrin binding, GTPase activity; INVOLVED IN: synaptic vesicle endocytosis; LOCATED IN: clathrin-coated endocytic vesicle, plasma membrane, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Pleckstrin homology-type (InterPro:IPR011993), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: dynamin-like protein 6 (TAIR:AT1G10290.1); Has 3314 Blast hits to 3127 proteins in 342 species: Archae - 0; Bacteria - 101; Metazoa - 1476; Fungi - 678; Plants - 726; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|35667 : 167.0) no description available & (gnl|cdd|84713 : 108.0) no description available & (reliability: 994.0) & (original description: Putative ADL6, Description = Dynamin-2B, PFAM = PF00350)' T '26.17' 'misc.dynamin' 'niben101scf09472_299861-303934' '(at1g59610 : 281.0) A high molecular weight GTPase whose GTP-binding domain shows a low homology to those of other plant dynamin-like proteins.Contains a pleckstrin homologous domain. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis.; dynamin-like 3 (DL3); FUNCTIONS IN: protein binding, clathrin binding, GTPase activity; INVOLVED IN: synaptic vesicle endocytosis; LOCATED IN: clathrin-coated endocytic vesicle, plasma membrane, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Pleckstrin homology-type (InterPro:IPR011993), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: dynamin-like protein 6 (TAIR:AT1G10290.1); Has 3314 Blast hits to 3127 proteins in 342 species: Archae - 0; Bacteria - 101; Metazoa - 1476; Fungi - 678; Plants - 726; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink). & (gnl|cdd|35667 : 87.7) no description available & (reliability: 562.0) & (original description: Putative ADL6, Description = Dynamin-2B, PFAM = )' T '26.17' 'misc.dynamin' 'niben101scf10476_531885-539515' '(at3g60190 : 1006.0) At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central ëdynamin 2ë domain and a C-terminal GTPase effector domain (GED), a typical structure for plant dynamin-related proteins. However, this class lacks a PH domain and a proline-rich domain, which are found in classical animal dynamin-like proteins. Based on work on animal dynamins, the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles, processes that are essential to vesicle trafficking and membrane compartmentalization. The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E. edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection.; DYNAMIN-like 1E (DL1E); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: response to cadmium ion, vesicle-mediated transport, defense response to fungus; LOCATED IN: mitochondrion, plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1D (TAIR:AT2G44590.3); Has 2915 Blast hits to 2753 proteins in 324 species: Archae - 2; Bacteria - 53; Metazoa - 1058; Fungi - 869; Plants - 577; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink). & (gnl|cdd|35667 : 595.0) no description available & (gnl|cdd|47402 : 254.0) no description available & (reliability: 2012.0) & (original description: Putative DRP1E, Description = Dynamin-related protein 1E, PFAM = PF02212;PF01031;PF00350)' T '26.17' 'misc.dynamin' 'niben101scf18730_47927-66326' '(at1g10290 : 1008.0) involved in trafficking from the trans-Golgi Network to the central vacuole.; dynamin-like protein 6 (ADL6); FUNCTIONS IN: GTPase activity; INVOLVED IN: Golgi to vacuole transport; LOCATED IN: Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Pleckstrin homology-type (InterPro:IPR011993), Dynamin, GTPase region, conserved site (InterPro:IPR019762), Dynamin, GTPase domain (InterPro:IPR001401), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: dynamin-like 3 (TAIR:AT1G59610.1); Has 3284 Blast hits to 3098 proteins in 352 species: Archae - 4; Bacteria - 126; Metazoa - 1435; Fungi - 709; Plants - 704; Viruses - 0; Other Eukaryotes - 306 (source: NCBI BLink). & (gnl|cdd|35667 : 259.0) no description available & (gnl|cdd|84713 : 108.0) no description available & (reliability: 2016.0) & (original description: Putative DRP2A, Description = Dynamin-2A, PFAM = PF00350;PF02212;PF01031;PF00169)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'nbv0.3scaffold50381_8994-13851' '(at4g25250 : 97.1) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G51520.1); Has 859 Blast hits to 852 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p17407|21kd_dauca : 87.4) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (reliability: 194.2) & (original description: Putative PGSC0003DMG400010813, Description = 21 kDa protein, putative, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'nbv0.5scaffold3975_29322-31894' '(at5g62350 : 125.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT3G47380.1); Has 780 Blast hits to 773 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 780; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17407|21kd_dauca : 121.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 107.0) no description available & (reliability: 250.0) & (original description: Putative PME1, Description = 21 kDa protein, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'nbv0.5scaffold6495_88382-90969' '(at1g14890 : 153.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT2G01610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86518 : 110.0) no description available & (p17407|21kd_dauca : 97.4) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (reliability: 306.0) & (original description: Putative At1g14890, Description = Pectinesterase inhibitor, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben044scf00008747ctg011_13348-15941' '(at4g25250 : 113.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G51520.1); Has 859 Blast hits to 852 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p17407|21kd_dauca : 103.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 88.6) no description available & (reliability: 226.0) & (original description: Putative PGSC0003DMG400010813, Description = 21 kDa protein, putative, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf00077_232038-246637' '(at1g14890 : 117.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT2G01610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p17407|21kd_dauca : 82.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 80.1) no description available & (reliability: 234.0) & (original description: Putative PGSC0003DMG400019123, Description = 21 kDa protein, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf00148_86348-88962' '(at5g62360 : 180.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G62350.1); Has 865 Blast hits to 858 proteins in 52 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 7; Plants - 850; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (p17407|21kd_dauca : 137.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 121.0) no description available & (reliability: 360.0) & (original description: Putative PMEI, Description = 21 kDa protein, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf00148_127009-129623' '(at5g62360 : 175.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G62350.1); Has 865 Blast hits to 858 proteins in 52 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 7; Plants - 850; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (p17407|21kd_dauca : 127.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 119.0) no description available & (reliability: 350.0) & (original description: Putative PMEI, Description = 21 kDa protein, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf00494_565032-567622' '(at4g25250 : 105.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G51520.1); Has 859 Blast hits to 852 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p17407|21kd_dauca : 97.8) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 86.3) no description available & (reliability: 210.0) & (original description: Putative PGSC0003DMG400027617, Description = 21 kDa protein, putative, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf00527_341544-344173' '(at1g62770 : 136.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: pectin methylesterase inhibitor 1 (TAIR:AT4G12390.1); Has 797 Blast hits to 790 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 797; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17407|21kd_dauca : 127.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 106.0) no description available & (reliability: 272.0) & (original description: Putative PMEI, Description = 21 kDa protein, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf00527_445591-448196' '(at4g00080 : 127.0) unfertilized embryo sac 11 (UNE11); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: double fertilization forming a zygote and endosperm; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT1G62770.1); Has 574 Blast hits to 571 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 574; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17407|21kd_dauca : 115.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 90.5) no description available & (reliability: 254.0) & (original description: Putative PGSC0003DMG400025965, Description = 21 kDa protein, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf00618_528110-530673' '(at5g64620 : 149.0) Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling.; cell wall / vacuolar inhibitor of fructosidase 2 (C/VIF2); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: response to karrikin; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: cell wall / vacuolar inhibitor of fructosidase 1 (TAIR:AT1G47960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86518 : 87.0) no description available & (reliability: 298.0) & (original description: Putative C/VIF2, Description = Cell wall / vacuolar inhibitor of fructosidase 2, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf00991_606621-609903' '(at1g47960 : 105.0) Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling. This protein may inhibit their activity.; cell wall / vacuolar inhibitor of fructosidase 1 (C/VIF1); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT3G17140.1); Has 169 Blast hits to 167 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative INH1, Description = Invertase inhibitor, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf01022_155155-157667' '(at1g47960 : 92.4) Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling. This protein may inhibit their activity.; cell wall / vacuolar inhibitor of fructosidase 1 (C/VIF1); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT3G17140.1); Has 169 Blast hits to 167 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative inhh, Description = Invertase inhibitor, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf01022_202709-206799' '(at1g47960 : 107.0) Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling. This protein may inhibit their activity.; cell wall / vacuolar inhibitor of fructosidase 1 (C/VIF1); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT3G17140.1); Has 169 Blast hits to 167 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86518 : 87.0) no description available & (reliability: 214.0) & (original description: Putative INH1, Description = Invertase inhibitor, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf01051_846261-848860' '(at5g62350 : 131.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT3G47380.1); Has 780 Blast hits to 773 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 780; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17407|21kd_dauca : 131.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 108.0) no description available & (reliability: 262.0) & (original description: Putative PME1, Description = 21 kDa protein, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf02111_1765739-1769328' '(at1g47960 : 105.0) Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling. This protein may inhibit their activity.; cell wall / vacuolar inhibitor of fructosidase 1 (C/VIF1); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT3G17140.1); Has 169 Blast hits to 167 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86518 : 84.7) no description available & (reliability: 210.0) & (original description: Putative INH1, Description = Putative invertase inhibitor, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf02494_12189-14785' '(at4g25250 : 116.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G51520.1); Has 859 Blast hits to 852 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p17407|21kd_dauca : 103.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 89.0) no description available & (reliability: 232.0) & (original description: Putative PGSC0003DMG400010814, Description = 21 kDa protein, putative, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf02494_128282-130875' '(at4g25250 : 114.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G51520.1); Has 859 Blast hits to 852 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p17407|21kd_dauca : 104.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 95.1) no description available & (reliability: 228.0) & (original description: Putative PGSC0003DMG400010813, Description = 21 kDa protein, putative, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf02494_153673-156245' '(p17407|21kd_dauca : 190.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (at5g62350 : 182.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT3G47380.1); Has 780 Blast hits to 773 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 780; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86518 : 126.0) no description available & (reliability: 364.0) & (original description: Putative PME1, Description = 21 kDa protein, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf03330_137272-139865' '(at5g20740 : 176.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT1G62770.1); Has 847 Blast hits to 840 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 847; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17407|21kd_dauca : 135.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 110.0) no description available & (reliability: 352.0) & (original description: Putative BnaC09g37120D, Description = BnaC09g37120D protein, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf03374_546373-548945' '(at5g62350 : 129.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT3G47380.1); Has 780 Blast hits to 773 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 780; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17407|21kd_dauca : 123.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 106.0) no description available & (reliability: 258.0) & (original description: Putative PME1, Description = 21 kDa protein, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf03954_228748-231431' '(at1g14890 : 176.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT2G01610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p17407|21kd_dauca : 120.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 117.0) no description available & (reliability: 352.0) & (original description: Putative BnaA08g31370D, Description = BnaA08g31370D protein, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf04217_483183-485764' '(p17407|21kd_dauca : 199.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (at5g62350 : 188.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT3G47380.1); Has 780 Blast hits to 773 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 780; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86518 : 123.0) no description available & (reliability: 376.0) & (original description: Putative PME1, Description = 21 kDa protein, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf04703_838558-841208' '(at1g62770 : 132.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: pectin methylesterase inhibitor 1 (TAIR:AT4G12390.1); Has 797 Blast hits to 790 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 797; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17407|21kd_dauca : 127.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 95.5) no description available & (reliability: 264.0) & (original description: Putative BnaAnng18590D, Description = BnaAnng18590D protein, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf04992_69870-72532' '(at1g14890 : 170.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT2G01610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86518 : 118.0) no description available & (p17407|21kd_dauca : 114.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (reliability: 340.0) & (original description: Putative BnaA08g31370D, Description = BnaA08g31370D protein, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf05030_216977-219570' '(at4g25250 : 113.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G51520.1); Has 859 Blast hits to 852 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p17407|21kd_dauca : 104.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 88.6) no description available & (reliability: 226.0) & (original description: Putative PGSC0003DMG400010813, Description = 21 kDa protein, putative, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf05030_226156-228800' '(at5g62360 : 134.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G62350.1); Has 865 Blast hits to 858 proteins in 52 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 7; Plants - 850; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (p17407|21kd_dauca : 131.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 114.0) no description available & (reliability: 268.0) & (original description: Putative PMEI, Description = 21 kDa protein, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf05437_247034-249564' '(p83326|pmei_actch : 142.0) Pectinesterase inhibitor (Pectin methylesterase inhibitor) (PMEI) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|86518 : 94.7) no description available & (at3g17220 : 85.5) Pectin methylesterase inhibitor AtPMEI2. Inactivates AtPPME1 in vitro. Localized to Brefeldin A-induced compartments, and was found in FYVE-induced endosomal aggregates.; pectin methylesterase inhibitor 2 (PMEI2); CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: pectin methylesterase inhibitor 1 (TAIR:AT1G48020.1); Has 238 Blast hits to 232 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 238; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative PMEI, Description = Pectinesterase inhibitor, PFAM = PF04043;PF12755)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf07639_582541-585107' '(at5g46970 : 94.7) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G46930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86518 : 92.0) no description available & (reliability: 189.4) & (original description: Putative InvI1, Description = Invertase inhibitor, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf07850_510312-512995' '(at2g01610 : 177.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT1G14890.1); Has 850 Blast hits to 843 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 850; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17407|21kd_dauca : 129.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 123.0) no description available & (reliability: 354.0) & (original description: Putative BnaA08g31370D, Description = BnaA08g31370D protein, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf09284_168187-170777' '(at5g38610 : 102.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G46940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86518 : 80.9) no description available & (reliability: 204.0) & (original description: Putative PGSC0003DMG400001844, Description = Putative invertase inhibitor, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf10232_395999-398358' '(at1g47960 : 89.4) Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling. This protein may inhibit their activity.; cell wall / vacuolar inhibitor of fructosidase 1 (C/VIF1); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT3G17140.1); Has 169 Blast hits to 167 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative INH1, Description = Putative invertase inhibitor, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf10354_36455-39039' '(at3g62820 : 156.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT2G47670.1); Has 816 Blast hits to 809 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 816; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86518 : 110.0) no description available & (p17407|21kd_dauca : 87.8) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (reliability: 312.0) & (original description: Putative BnaC08g32510D, Description = BnaC08g32510D protein, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf10810_182080-184670' '(at5g20740 : 174.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT1G62770.1); Has 847 Blast hits to 840 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 847; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17407|21kd_dauca : 139.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 113.0) no description available & (reliability: 348.0) & (original description: Putative PMEI, Description = 21 kDa protein, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf11361_173304-175939' '(at1g62770 : 127.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: pectin methylesterase inhibitor 1 (TAIR:AT4G12390.1); Has 797 Blast hits to 790 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 797; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17407|21kd_dauca : 124.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 95.5) no description available & (reliability: 254.0) & (original description: Putative grip28, Description = Putative pectin methylesterase inhibitor, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf11361_219095-221712' '(at4g25260 : 141.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: shade avoidance; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G62350.1); Has 774 Blast hits to 767 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 774; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17407|21kd_dauca : 139.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 106.0) no description available & (reliability: 282.0) & (original description: Putative PMEI, Description = 21 kDa protein, PFAM = PF04043)' T '26.18' 'misc.invertase/pectin methylesterase inhibitor family protein' 'niben101scf18293_9039-11776' '(at1g62770 : 164.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: pectin methylesterase inhibitor 1 (TAIR:AT4G12390.1); Has 797 Blast hits to 790 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 797; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17407|21kd_dauca : 150.0) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (gnl|cdd|86518 : 126.0) no description available & (reliability: 328.0) & (original description: Putative PME1, Description = 21 kDa protein, PFAM = PF04043)' T '26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold880_59014-63809' '(at5g07475 : 99.8) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: uclacyanin 1 (TAIR:AT2G32300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66026 : 91.5) no description available & (reliability: 199.6) & (original description: Putative PGSC0003DMG400003448, Description = Cupredoxin, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold1895_58341-61352' '(at5g15350 : 105.0) early nodulin-like protein 17 (ENODL17); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 19 (TAIR:AT4G12880.1); Has 1394 Blast hits to 1353 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1394; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 91.5) no description available & (reliability: 210.0) & (original description: Putative PGSC0003DMG400028648, Description = Lamin-like protein, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold6735_34217-36936' '(gnl|cdd|66026 : 106.0) no description available & (p29602|cpc_cucsa : 101.0) Cucumber peeling cupredoxin (CPC) (Stellacyanin) - Cucumis sativus (Cucumber) & (at5g20230 : 90.5) Al-stress-induced gene; blue-copper-binding protein (BCB); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to oxidative stress, response to salt stress, aluminum ion transport, response to wounding, response to absence of light; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G72230.1); Has 2817 Blast hits to 1998 proteins in 202 species: Archae - 2; Bacteria - 847; Metazoa - 51; Fungi - 106; Plants - 1463; Viruses - 11; Other Eukaryotes - 337 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative CitBC, Description = Stellacyanin, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold12261_20519-24200' '(gnl|cdd|66026 : 92.3) no description available & (at2g25060 : 84.0) early nodulin-like protein 14 (ENODL14); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 15 (TAIR:AT4G31840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative PGSC0003DMG400030919, Description = Copper binding protein 5, putative, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold20702_9693-14094' '(at5g26330 : 95.1) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66026 : 82.7) no description available & (reliability: 190.2) & (original description: Putative BCP7, Description = Copper binding protein 7, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold26934_25093-27340' '(at3g20570 : 145.0) early nodulin-like protein 9 (ENODL9); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 14 (TAIR:AT2G25060.1); Has 1508 Blast hits to 1459 proteins in 80 species: Archae - 0; Bacteria - 15; Metazoa - 3; Fungi - 4; Plants - 1464; Viruses - 2; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|66026 : 88.8) no description available & (reliability: 290.0) & (original description: Putative ENODL9, Description = At3g20570, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold36856_1-3160' '(at3g60280 : 105.0) Encodes blue copper-binding protein III.; uclacyanin 3 (UCC3); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT3G60270.1); Has 71481 Blast hits to 30143 proteins in 1641 species: Archae - 182; Bacteria - 13480; Metazoa - 20867; Fungi - 8047; Plants - 12494; Viruses - 2867; Other Eukaryotes - 13544 (source: NCBI BLink). & (gnl|cdd|66026 : 98.8) no description available & (q41001|bcp_pea : 95.9) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 210.0) & (original description: Putative UCC2, Description = Blue copper protein, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold37441_4261-7193' '(at1g48940 : 141.0) early nodulin-like protein 6 (ENODL6); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 5 (TAIR:AT3G18590.1); Has 1289 Blast hits to 1246 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 95.4) no description available & (p93328|no16_medtr : 82.4) Early nodulin 16 precursor (N-16) - Medicago truncatula (Barrel medic) & (reliability: 282.0) & (original description: Putative ntepb1, Description = Phosphoprotein NtEPb1, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold38407_10239-13771' '(at2g27035 : 145.0) Has been classified as a stellacyanin. Has also been classified as an early nodulin-like protein (ENODL), because it does not have a His residue involved in Cu binding. ENODLs are proteins having one plastocyanin-like (PCNL) domain lacking the amino acid residues necessary for Cu binding.; early nodulin-like protein 20 (ENODL20); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 17 (TAIR:AT5G15350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative ENODL20, Description = Early nodulin-like protein 20, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold45187_13257-17089' '(at4g28365 : 125.0) early nodulin-like protein 3 (ENODL3); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 4 (TAIR:AT4G32490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66026 : 102.0) no description available & (gnl|cdd|35481 : 81.9) no description available & (reliability: 250.0) & (original description: Putative CT099, Description = Early nodulin-like protein 2, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold47740_6973-10440' '(at4g28365 : 126.0) early nodulin-like protein 3 (ENODL3); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 4 (TAIR:AT4G32490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66026 : 93.1) no description available & (reliability: 252.0) & (original description: Putative CT099, Description = CT099, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold80204_2034-5566' '(at4g32490 : 130.0) early nodulin-like protein 4 (ENODL4); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 3 (TAIR:AT4G28365.1); Has 2784 Blast hits to 1902 proteins in 202 species: Archae - 4; Bacteria - 437; Metazoa - 154; Fungi - 144; Plants - 1454; Viruses - 202; Other Eukaryotes - 389 (source: NCBI BLink). & (gnl|cdd|66026 : 99.2) no description available & (reliability: 260.0) & (original description: Putative CT099, Description = CT099, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold84305_846-5102' '(gnl|cdd|66026 : 101.0) no description available & (at5g20230 : 95.9) Al-stress-induced gene; blue-copper-binding protein (BCB); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to oxidative stress, response to salt stress, aluminum ion transport, response to wounding, response to absence of light; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G72230.1); Has 2817 Blast hits to 1998 proteins in 202 species: Archae - 2; Bacteria - 847; Metazoa - 51; Fungi - 106; Plants - 1463; Viruses - 11; Other Eukaryotes - 337 (source: NCBI BLink). & (p29602|cpc_cucsa : 89.7) Cucumber peeling cupredoxin (CPC) (Stellacyanin) - Cucumis sativus (Cucumber) & (reliability: 191.8) & (original description: Putative BCB, Description = Blue copper protein, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold85959_1-2803' '(at3g18590 : 154.0) early nodulin-like protein 5 (ENODL5); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 6 (TAIR:AT1G48940.1); Has 1372 Blast hits to 1325 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1369; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|66026 : 102.0) no description available & (reliability: 308.0) & (original description: Putative ntepc, Description = NtEPc, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'nbv0.3scaffold98369_1-4239' '(at1g08500 : 99.8) early nodulin-like protein 18 (ENODL18); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 799 Blast hits to 788 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 799; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 199.6) & (original description: Putative TCM_005471, Description = Early nodulin-like protein 18 isoform 1, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'nbv0.5scaffold37_834414-839619' '(at4g32490 : 124.0) early nodulin-like protein 4 (ENODL4); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 3 (TAIR:AT4G28365.1); Has 2784 Blast hits to 1902 proteins in 202 species: Archae - 4; Bacteria - 437; Metazoa - 154; Fungi - 144; Plants - 1454; Viruses - 202; Other Eukaryotes - 389 (source: NCBI BLink). & (gnl|cdd|66026 : 98.8) no description available & (reliability: 248.0) & (original description: Putative BnaC09g30230D, Description = BnaC09g30230D protein, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'nbv0.5scaffold411_754421-771963' '(at4g31840 : 152.0) early nodulin-like protein 15 (ENODL15); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 14 (TAIR:AT2G25060.1); Has 1458 Blast hits to 1409 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1458; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p93328|no16_medtr : 106.0) Early nodulin 16 precursor (N-16) - Medicago truncatula (Barrel medic) & (gnl|cdd|66026 : 106.0) no description available & (reliability: 304.0) & (original description: Putative PLA1, Description = Early nodulin-like protein 1, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'nbv0.5scaffold2405_209046-213064' '(at4g28365 : 122.0) early nodulin-like protein 3 (ENODL3); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 4 (TAIR:AT4G32490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66026 : 102.0) no description available & (reliability: 244.0) & (original description: Putative CT099, Description = CT099, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'nbv0.5scaffold6548_16934-20798' '(gnl|cdd|66026 : 117.0) no description available & (at5g20230 : 94.7) Al-stress-induced gene; blue-copper-binding protein (BCB); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to oxidative stress, response to salt stress, aluminum ion transport, response to wounding, response to absence of light; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G72230.1); Has 2817 Blast hits to 1998 proteins in 202 species: Archae - 2; Bacteria - 847; Metazoa - 51; Fungi - 106; Plants - 1463; Viruses - 11; Other Eukaryotes - 337 (source: NCBI BLink). & (q41001|bcp_pea : 93.6) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 189.4) & (original description: Putative phy, Description = Blue copper protein, PFAM = PF02298;PF02298)' T '26.19' 'misc.plastocyanin-like' 'nbv0.5scaffold8879_27014-29387' '(at2g25060 : 103.0) early nodulin-like protein 14 (ENODL14); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 15 (TAIR:AT4G31840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative PLA1, Description = Early nodulin-like protein 1, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben044scf00001451ctg020_2743-6171' '(at4g31840 : 153.0) early nodulin-like protein 15 (ENODL15); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 14 (TAIR:AT2G25060.1); Has 1458 Blast hits to 1409 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1458; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p93328|no16_medtr : 106.0) Early nodulin 16 precursor (N-16) - Medicago truncatula (Barrel medic) & (gnl|cdd|66026 : 106.0) no description available & (reliability: 306.0) & (original description: Putative At2g25060, Description = Early nodulin-like protein 1, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben044scf00003019ctg000_1-2798' '(at1g64640 : 145.0) early nodulin-like protein 8 (ENODL8); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 3 (TAIR:AT4G28365.1); Has 1336 Blast hits to 1294 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1335; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66026 : 90.8) no description available & (reliability: 290.0) & (original description: Putative ENODL8, Description = At1g64640, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben044scf00004121ctg005_5222-7850' '(at5g26330 : 110.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66026 : 104.0) no description available & (q41001|bcp_pea : 95.9) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 220.0) & (original description: Putative PGSC0003DMG400045671, Description = , PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben044scf00005302ctg002_1380-4359' '(gnl|cdd|66026 : 102.0) no description available & (at5g20230 : 99.4) Al-stress-induced gene; blue-copper-binding protein (BCB); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to oxidative stress, response to salt stress, aluminum ion transport, response to wounding, response to absence of light; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G72230.1); Has 2817 Blast hits to 1998 proteins in 202 species: Archae - 2; Bacteria - 847; Metazoa - 51; Fungi - 106; Plants - 1463; Viruses - 11; Other Eukaryotes - 337 (source: NCBI BLink). & (p29602|cpc_cucsa : 93.2) Cucumber peeling cupredoxin (CPC) (Stellacyanin) - Cucumis sativus (Cucumber) & (reliability: 198.8) & (original description: Putative BCB, Description = Blue copper protein, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben044scf00005302ctg015_9255-12922' '(gnl|cdd|66026 : 90.8) no description available & (at2g25060 : 85.1) early nodulin-like protein 14 (ENODL14); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 15 (TAIR:AT4G31840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative PGSC0003DMG400030919, Description = Cupredoxin superfamily protein, putative isoform 1, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben044scf00016026ctg005_8234-11734' '(at5g26330 : 132.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66026 : 121.0) no description available & (q41001|bcp_pea : 97.8) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 264.0) & (original description: Putative BCP1, Description = Cupredoxin superfamily protein, putative, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben044scf00021994ctg002_54459-57322' '(at5g26330 : 105.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66026 : 102.0) no description available & (p00303|babl_cucsa : 89.4) Basic blue protein (Cusacyanin) (Plantacyanin) (CBP) - Cucumis sativus (Cucumber) & (reliability: 210.0) & (original description: Putative PGSC0003DMG400038171, Description = Mavicyanin, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben044scf00032820ctg017_1-15733' '(at5g26330 : 134.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66026 : 115.0) no description available & (p60496|babl_lillo : 91.7) Chemocyanin precursor (Basic blue protein) (Plantacyanin) - Lilium longiflorum (Trumpet lily) & (reliability: 268.0) & (original description: Putative BCP7, Description = Mavicyanin, PFAM = PF02298;PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben044scf00034675ctg009_1-1773' '(p60496|babl_lillo : 94.0) Chemocyanin precursor (Basic blue protein) (Plantacyanin) - Lilium longiflorum (Trumpet lily) & (at2g02850 : 93.2) Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil.; plantacyanin (ARPN); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: pollination, anther development; LOCATED IN: middle lamella-containing extracellular matrix, apoplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT5G26330.1); Has 1174 Blast hits to 1133 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1174; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 86.1) no description available & (reliability: 186.4) & (original description: Putative PGSC0003DMG400039863, Description = Plantacyanin, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben044scf00048291ctg000_1-2305' '(at3g18590 : 155.0) early nodulin-like protein 5 (ENODL5); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 6 (TAIR:AT1G48940.1); Has 1372 Blast hits to 1325 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1369; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|66026 : 102.0) no description available & (reliability: 310.0) & (original description: Putative ntepc, Description = NtEPc, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben044scf00050087ctg005_301-3745' '(at3g27200 : 148.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: uclacyanin 1 (TAIR:AT2G32300.1); Has 1603 Blast hits to 1540 proteins in 96 species: Archae - 0; Bacteria - 21; Metazoa - 19; Fungi - 24; Plants - 1498; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|66026 : 110.0) no description available & (q41001|bcp_pea : 92.0) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 296.0) & (original description: Putative BnaC02g36760D, Description = BnaC02g36760D protein, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben044scf00059034ctg002_316-3571' '(at3g60280 : 103.0) Encodes blue copper-binding protein III.; uclacyanin 3 (UCC3); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT3G60270.1); Has 71481 Blast hits to 30143 proteins in 1641 species: Archae - 182; Bacteria - 13480; Metazoa - 20867; Fungi - 8047; Plants - 12494; Viruses - 2867; Other Eukaryotes - 13544 (source: NCBI BLink). & (gnl|cdd|66026 : 98.5) no description available & (q41001|bcp_pea : 95.9) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 206.0) & (original description: Putative UCC2, Description = Cupredoxin superfamily protein, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben044scf00059651ctg000_1-27215' '(at3g20570 : 138.0) early nodulin-like protein 9 (ENODL9); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 14 (TAIR:AT2G25060.1); Has 1508 Blast hits to 1459 proteins in 80 species: Archae - 0; Bacteria - 15; Metazoa - 3; Fungi - 4; Plants - 1464; Viruses - 2; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|66026 : 89.6) no description available & (reliability: 276.0) & (original description: Putative ENODL9, Description = At3g20570, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101ctg06624_1-725' '(p60496|babl_lillo : 115.0) Chemocyanin precursor (Basic blue protein) (Plantacyanin) - Lilium longiflorum (Trumpet lily) & (at2g02850 : 100.0) Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil.; plantacyanin (ARPN); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: pollination, anther development; LOCATED IN: middle lamella-containing extracellular matrix, apoplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT5G26330.1); Has 1174 Blast hits to 1133 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1174; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 94.2) no description available & (reliability: 200.0) & (original description: Putative babl, Description = Basic blue protein, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf00046_746365-767069' '(at1g48940 : 141.0) early nodulin-like protein 6 (ENODL6); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 5 (TAIR:AT3G18590.1); Has 1289 Blast hits to 1246 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 95.8) no description available & (p93329|no20_medtr : 82.4) Early nodulin 20 precursor (N-20) - Medicago truncatula (Barrel medic) & (reliability: 282.0) & (original description: Putative ntepb1, Description = Phosphoprotein NtEPb1, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf00347_17583-21786' '(at4g32490 : 122.0) early nodulin-like protein 4 (ENODL4); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 3 (TAIR:AT4G28365.1); Has 2784 Blast hits to 1902 proteins in 202 species: Archae - 4; Bacteria - 437; Metazoa - 154; Fungi - 144; Plants - 1454; Viruses - 202; Other Eukaryotes - 389 (source: NCBI BLink). & (gnl|cdd|66026 : 83.0) no description available & (reliability: 244.0) & (original description: Putative glysoja_040307, Description = Early nodulin-like protein 2, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf00426_144788-149315' '(gnl|cdd|66026 : 84.2) no description available & (at3g27200 : 84.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: uclacyanin 1 (TAIR:AT2G32300.1); Has 1603 Blast hits to 1540 proteins in 96 species: Archae - 0; Bacteria - 21; Metazoa - 19; Fungi - 24; Plants - 1498; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative BCP2, Description = Copper binding protein 2, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf00873_126377-165379' '(at4g28365 : 129.0) early nodulin-like protein 3 (ENODL3); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 4 (TAIR:AT4G32490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66026 : 85.4) no description available & (reliability: 258.0) & (original description: Putative ENODL3, Description = Early nodulin-like protein 3, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf01036_867815-871892' '(at4g27520 : 130.0) early nodulin-like protein 2 (ENODL2); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 1 (TAIR:AT5G53870.1); Has 168805 Blast hits to 80761 proteins in 2510 species: Archae - 213; Bacteria - 30974; Metazoa - 63826; Fungi - 28998; Plants - 14037; Viruses - 3902; Other Eukaryotes - 26855 (source: NCBI BLink). & (gnl|cdd|66026 : 99.6) no description available & (p93328|no16_medtr : 82.0) Early nodulin 16 precursor (N-16) - Medicago truncatula (Barrel medic) & (gnl|cdd|35481 : 81.6) no description available & (reliability: 260.0) & (original description: Putative CT099, Description = CT099, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf01175_42842-48599' '(at4g32490 : 126.0) early nodulin-like protein 4 (ENODL4); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 3 (TAIR:AT4G28365.1); Has 2784 Blast hits to 1902 proteins in 202 species: Archae - 4; Bacteria - 437; Metazoa - 154; Fungi - 144; Plants - 1454; Viruses - 202; Other Eukaryotes - 389 (source: NCBI BLink). & (gnl|cdd|66026 : 98.5) no description available & (reliability: 252.0) & (original description: Putative BnaC09g30230D, Description = BnaC09g30230D protein, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf01706_72029-74738' '(at1g64640 : 140.0) early nodulin-like protein 8 (ENODL8); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 3 (TAIR:AT4G28365.1); Has 1336 Blast hits to 1294 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1335; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66026 : 88.1) no description available & (reliability: 280.0) & (original description: Putative ENODL8, Description = At1g64640, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf02021_640197-657433' '(at5g26330 : 138.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66026 : 119.0) no description available & (q41001|bcp_pea : 103.0) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 276.0) & (original description: Putative BCP7, Description = Mavicyanin, PFAM = PF02298;PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf02124_215066-217644' '(at5g15350 : 103.0) early nodulin-like protein 17 (ENODL17); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 19 (TAIR:AT4G12880.1); Has 1394 Blast hits to 1353 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1394; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 89.2) no description available & (reliability: 206.0) & (original description: Putative PGSC0003DMG400028648, Description = Lamin-like protein, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf02407_959599-963924' '(at3g60280 : 106.0) Encodes blue copper-binding protein III.; uclacyanin 3 (UCC3); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT3G60270.1); Has 71481 Blast hits to 30143 proteins in 1641 species: Archae - 182; Bacteria - 13480; Metazoa - 20867; Fungi - 8047; Plants - 12494; Viruses - 2867; Other Eukaryotes - 13544 (source: NCBI BLink). & (gnl|cdd|66026 : 100.0) no description available & (q41001|bcp_pea : 98.2) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 212.0) & (original description: Putative UCC2, Description = Blue copper protein, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf02562_29396-31770' '(at2g25060 : 104.0) early nodulin-like protein 14 (ENODL14); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 15 (TAIR:AT4G31840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66026 : 80.4) no description available & (reliability: 208.0) & (original description: Putative PLA1, Description = Early nodulin-like protein 1, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf02819_35790-48241' '(p29602|cpc_cucsa : 107.0) Cucumber peeling cupredoxin (CPC) (Stellacyanin) - Cucumis sativus (Cucumber) & (gnl|cdd|66026 : 105.0) no description available & (at5g20230 : 87.8) Al-stress-induced gene; blue-copper-binding protein (BCB); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to oxidative stress, response to salt stress, aluminum ion transport, response to wounding, response to absence of light; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G72230.1); Has 2817 Blast hits to 1998 proteins in 202 species: Archae - 2; Bacteria - 847; Metazoa - 51; Fungi - 106; Plants - 1463; Viruses - 11; Other Eukaryotes - 337 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative CitBC, Description = Blue copper protein, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf02838_850162-854026' '(gnl|cdd|66026 : 117.0) no description available & (at5g20230 : 94.0) Al-stress-induced gene; blue-copper-binding protein (BCB); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to oxidative stress, response to salt stress, aluminum ion transport, response to wounding, response to absence of light; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G72230.1); Has 2817 Blast hits to 1998 proteins in 202 species: Archae - 2; Bacteria - 847; Metazoa - 51; Fungi - 106; Plants - 1463; Viruses - 11; Other Eukaryotes - 337 (source: NCBI BLink). & (p29602|cpc_cucsa : 88.6) Cucumber peeling cupredoxin (CPC) (Stellacyanin) - Cucumis sativus (Cucumber) & (reliability: 188.0) & (original description: Putative phy, Description = Blue copper protein, PFAM = PF02298;PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf02995_46808-57262' '(at3g27200 : 85.5) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: uclacyanin 1 (TAIR:AT2G32300.1); Has 1603 Blast hits to 1540 proteins in 96 species: Archae - 0; Bacteria - 21; Metazoa - 19; Fungi - 24; Plants - 1498; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|66026 : 82.7) no description available & (reliability: 171.0) & (original description: Putative BCP9, Description = Copper binding protein 9, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf03044_22792-25029' '(at3g20570 : 140.0) early nodulin-like protein 9 (ENODL9); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 14 (TAIR:AT2G25060.1); Has 1508 Blast hits to 1459 proteins in 80 species: Archae - 0; Bacteria - 15; Metazoa - 3; Fungi - 4; Plants - 1464; Viruses - 2; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|66026 : 95.0) no description available & (reliability: 280.0) & (original description: Putative ENODL9, Description = At3g20570, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf03224_495443-498550' '(at5g15350 : 94.0) early nodulin-like protein 17 (ENODL17); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 19 (TAIR:AT4G12880.1); Has 1394 Blast hits to 1353 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1394; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 88.1) no description available & (reliability: 188.0) & (original description: Putative PGSC0003DMG400028648, Description = Lamin-like protein, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf03446_1083231-1261080' '(at4g31840 : 161.0) early nodulin-like protein 15 (ENODL15); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 14 (TAIR:AT2G25060.1); Has 1458 Blast hits to 1409 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1458; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 106.0) no description available & (q02917|no552_soybn : 103.0) Early nodulin 55-2 precursor (N-55-2) (Nodulin-315) - Glycine max (Soybean) & (reliability: 322.0) & (original description: Putative At2g25060, Description = Early nodulin-like protein 1, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf03600_19052-22088' '(at3g27200 : 150.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: uclacyanin 1 (TAIR:AT2G32300.1); Has 1603 Blast hits to 1540 proteins in 96 species: Archae - 0; Bacteria - 21; Metazoa - 19; Fungi - 24; Plants - 1498; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|66026 : 110.0) no description available & (q41001|bcp_pea : 92.8) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 300.0) & (original description: Putative BnaC02g36760D, Description = BnaC02g36760D protein, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf03930_1-3720' '(p29602|cpc_cucsa : 104.0) Cucumber peeling cupredoxin (CPC) (Stellacyanin) - Cucumis sativus (Cucumber) & (gnl|cdd|66026 : 102.0) no description available & (at5g20230 : 90.1) Al-stress-induced gene; blue-copper-binding protein (BCB); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to oxidative stress, response to salt stress, aluminum ion transport, response to wounding, response to absence of light; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G72230.1); Has 2817 Blast hits to 1998 proteins in 202 species: Archae - 2; Bacteria - 847; Metazoa - 51; Fungi - 106; Plants - 1463; Viruses - 11; Other Eukaryotes - 337 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative CitBC, Description = Blue copper protein, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf04104_82275-87579' '(gnl|cdd|66026 : 87.7) no description available & (at5g07475 : 84.3) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: uclacyanin 1 (TAIR:AT2G32300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative PGSC0003DMG400003448, Description = Uclacyanin 3, putative, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf04444_812658-815913' '(at1g79800 : 130.0) early nodulin-like protein 7 (ENODL7); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 5 (TAIR:AT3G18590.1); Has 1368 Blast hits to 1323 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1368; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 90.4) no description available & (reliability: 260.0) & (original description: Putative ENODL5, Description = Early nodulin-like protein 1, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf04551_179452-182080' '(at5g26330 : 82.4) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative PGSC0003DMG400038171, Description = , PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf04989_337109-340641' '(at4g32490 : 130.0) early nodulin-like protein 4 (ENODL4); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 3 (TAIR:AT4G28365.1); Has 2784 Blast hits to 1902 proteins in 202 species: Archae - 4; Bacteria - 437; Metazoa - 154; Fungi - 144; Plants - 1454; Viruses - 202; Other Eukaryotes - 389 (source: NCBI BLink). & (gnl|cdd|66026 : 99.6) no description available & (reliability: 260.0) & (original description: Putative At4g27520, Description = Early nodulin-like protein 2, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf05158_173193-176357' '(at3g18590 : 155.0) early nodulin-like protein 5 (ENODL5); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 6 (TAIR:AT1G48940.1); Has 1372 Blast hits to 1325 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1369; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|66026 : 94.2) no description available & (reliability: 310.0) & (original description: Putative ntepc, Description = NtEPc, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf05559_124381-127158' '(at5g26330 : 132.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66026 : 111.0) no description available & (q41001|bcp_pea : 94.4) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 264.0) & (original description: Putative BCP7, Description = Mavicyanin, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf05601_86258-91575' '(at5g26330 : 172.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66026 : 128.0) no description available & (q41001|bcp_pea : 98.2) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 344.0) & (original description: Putative BCP7, Description = Cupredoxin superfamily protein, putative, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf05824_733132-742326' '(at4g31840 : 152.0) early nodulin-like protein 15 (ENODL15); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 14 (TAIR:AT2G25060.1); Has 1458 Blast hits to 1409 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1458; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q02917|no552_soybn : 108.0) Early nodulin 55-2 precursor (N-55-2) (Nodulin-315) - Glycine max (Soybean) & (gnl|cdd|66026 : 106.0) no description available & (reliability: 304.0) & (original description: Putative PLA1, Description = Early nodulin-like protein 1, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf06026_171777-176068' '(at5g15350 : 157.0) early nodulin-like protein 17 (ENODL17); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 19 (TAIR:AT4G12880.1); Has 1394 Blast hits to 1353 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1394; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 89.6) no description available & (reliability: 314.0) & (original description: Putative At5g15350, Description = Lamin-like protein, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf06094_193699-196824' '(gnl|cdd|66026 : 104.0) no description available & (at2g32300 : 102.0) Encodes a uclacyanin, a protein precursor that is closely related to precursors of stellacyanins and a blue copper protein from pea pods.; uclacyanin 1 (UCC1); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G26720.1); Has 7686 Blast hits to 4254 proteins in 462 species: Archae - 22; Bacteria - 692; Metazoa - 1349; Fungi - 628; Plants - 1950; Viruses - 176; Other Eukaryotes - 2869 (source: NCBI BLink). & (q41001|bcp_pea : 85.9) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 193.4) & (original description: Putative UCC1, Description = Blue copper protein, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf06633_197000-201768' '(at4g28365 : 122.0) early nodulin-like protein 3 (ENODL3); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 4 (TAIR:AT4G32490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66026 : 99.6) no description available & (reliability: 244.0) & (original description: Putative CEL, Description = Early nodulin-like protein 2, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf07227_171986-175062' '(at5g07475 : 137.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: uclacyanin 1 (TAIR:AT2G32300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66026 : 93.4) no description available & (q41001|bcp_pea : 92.8) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 274.0) & (original description: Putative At5g07475, Description = At5g07475, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf07438_464184-473191' '(gnl|cdd|66026 : 102.0) no description available & (at1g45063 : 96.3) copper ion binding;electron carriers; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: plastocyanin-like domain-containing protein (TAIR:AT3G53330.1); Has 2601 Blast hits to 1373 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2600; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p00303|babl_cucsa : 81.3) Basic blue protein (Cusacyanin) (Plantacyanin) (CBP) - Cucumis sativus (Cucumber) & (reliability: 183.4) & (original description: Putative BCP, Description = Blue copper protein, PFAM = PF02298;PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf07578_41192-44203' '(q41001|bcp_pea : 134.0) Blue copper protein precursor - Pisum sativum (Garden pea) & (at1g72230 : 115.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G22480.1); Has 1425 Blast hits to 1386 proteins in 65 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 1420; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|66026 : 97.7) no description available & (reliability: 230.0) & (original description: Putative BnaA07g29960D, Description = BnaA07g29960D protein, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf09149_121911-125942' '(p00303|babl_cucsa : 137.0) Basic blue protein (Cusacyanin) (Plantacyanin) (CBP) - Cucumis sativus (Cucumber) & (at2g02850 : 128.0) Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil.; plantacyanin (ARPN); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: pollination, anther development; LOCATED IN: middle lamella-containing extracellular matrix, apoplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT5G26330.1); Has 1174 Blast hits to 1133 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1174; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 105.0) no description available & (reliability: 256.0) & (original description: Putative babl, Description = Basic blue protein, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf09149_167767-170222' '(at2g02850 : 95.9) Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil.; plantacyanin (ARPN); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: pollination, anther development; LOCATED IN: middle lamella-containing extracellular matrix, apoplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT5G26330.1); Has 1174 Blast hits to 1133 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1174; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p60496|babl_lillo : 94.4) Chemocyanin precursor (Basic blue protein) (Plantacyanin) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|66026 : 92.3) no description available & (reliability: 191.8) & (original description: Putative PGSC0003DMG400039863, Description = Basic blue protein, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf09149_188811-191343' '(p60496|babl_lillo : 110.0) Chemocyanin precursor (Basic blue protein) (Plantacyanin) - Lilium longiflorum (Trumpet lily) & (at2g02850 : 108.0) Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil.; plantacyanin (ARPN); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: pollination, anther development; LOCATED IN: middle lamella-containing extracellular matrix, apoplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT5G26330.1); Has 1174 Blast hits to 1133 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1174; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 93.8) no description available & (reliability: 216.0) & (original description: Putative ARPN, Description = Basic blue protein, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf09363_32699-35571' '(at1g79800 : 132.0) early nodulin-like protein 7 (ENODL7); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 5 (TAIR:AT3G18590.1); Has 1368 Blast hits to 1323 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1368; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 85.7) no description available & (reliability: 264.0) & (original description: Putative A26, Description = NtEPc-like protein, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf09751_190475-194239' '(at5g26330 : 127.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66026 : 103.0) no description available & (reliability: 254.0) & (original description: Putative BCP7, Description = Mavicyanin, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf09928_486-2669' '(at5g15350 : 103.0) early nodulin-like protein 17 (ENODL17); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 19 (TAIR:AT4G12880.1); Has 1394 Blast hits to 1353 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1394; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66026 : 86.1) no description available & (reliability: 206.0) & (original description: Putative PGSC0003DMG400028648, Description = Lamin-like protein, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf10259_59016-79193' '(at1g08500 : 99.4) early nodulin-like protein 18 (ENODL18); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 799 Blast hits to 788 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 799; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 198.8) & (original description: Putative TCM_005471, Description = Early nodulin-like protein 18 isoform 1, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf10688_132868-139769' '(gnl|cdd|66026 : 120.0) no description available & (at5g20230 : 99.0) Al-stress-induced gene; blue-copper-binding protein (BCB); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to oxidative stress, response to salt stress, aluminum ion transport, response to wounding, response to absence of light; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G72230.1); Has 2817 Blast hits to 1998 proteins in 202 species: Archae - 2; Bacteria - 847; Metazoa - 51; Fungi - 106; Plants - 1463; Viruses - 11; Other Eukaryotes - 337 (source: NCBI BLink). & (q41001|bcp_pea : 94.7) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 198.0) & (original description: Putative BCP5, Description = Blue copper protein, PFAM = PF02298;PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf10688_227984-231699' '(gnl|cdd|66026 : 106.0) no description available & (at5g20230 : 102.0) Al-stress-induced gene; blue-copper-binding protein (BCB); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to oxidative stress, response to salt stress, aluminum ion transport, response to wounding, response to absence of light; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G72230.1); Has 2817 Blast hits to 1998 proteins in 202 species: Archae - 2; Bacteria - 847; Metazoa - 51; Fungi - 106; Plants - 1463; Viruses - 11; Other Eukaryotes - 337 (source: NCBI BLink). & (p29602|cpc_cucsa : 96.3) Cucumber peeling cupredoxin (CPC) (Stellacyanin) - Cucumis sativus (Cucumber) & (reliability: 204.0) & (original description: Putative BCB, Description = Blue copper protein, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf11424_267702-273284' '(at4g32490 : 130.0) early nodulin-like protein 4 (ENODL4); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 3 (TAIR:AT4G28365.1); Has 2784 Blast hits to 1902 proteins in 202 species: Archae - 4; Bacteria - 437; Metazoa - 154; Fungi - 144; Plants - 1454; Viruses - 202; Other Eukaryotes - 389 (source: NCBI BLink). & (gnl|cdd|66026 : 85.7) no description available & (reliability: 260.0) & (original description: Putative ENODL1, Description = Early nodulin-like protein 2, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf11684_292668-299419' '(at1g08500 : 213.0) early nodulin-like protein 18 (ENODL18); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 799 Blast hits to 788 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 799; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative T27G7.18, Description = Early nodulin-like protein 18, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf11724_392737-395801' '(at3g20570 : 137.0) early nodulin-like protein 9 (ENODL9); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 14 (TAIR:AT2G25060.1); Has 1508 Blast hits to 1459 proteins in 80 species: Archae - 0; Bacteria - 15; Metazoa - 3; Fungi - 4; Plants - 1464; Viruses - 2; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|66026 : 95.4) no description available & (reliability: 274.0) & (original description: Putative ENODL1, Description = Early nodulin-like protein 2, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf11774_194552-197563' '(at3g20570 : 132.0) early nodulin-like protein 9 (ENODL9); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 14 (TAIR:AT2G25060.1); Has 1508 Blast hits to 1459 proteins in 80 species: Archae - 0; Bacteria - 15; Metazoa - 3; Fungi - 4; Plants - 1464; Viruses - 2; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|66026 : 89.2) no description available & (reliability: 264.0) & (original description: Putative ENODL9, Description = At3g20570, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf14172_1-2292' '(at5g26330 : 102.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66026 : 101.0) no description available & (q41001|bcp_pea : 85.1) Blue copper protein precursor - Pisum sativum (Garden pea) & (reliability: 204.0) & (original description: Putative PGSC0003DMG400045450, Description = Cupredoxin superfamily protein, putative, PFAM = PF02298)' T '26.19' 'misc.plastocyanin-like' 'niben101scf16738_68802-72361' '(at5g26330 : 135.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66026 : 110.0) no description available & (p60496|babl_lillo : 88.2) Chemocyanin precursor (Basic blue protein) (Plantacyanin) - Lilium longiflorum (Trumpet lily) & (reliability: 270.0) & (original description: Putative BCP7, Description = Cupredoxin superfamily protein, putative, PFAM = PF02298)' T '26.20' 'misc.ferredoxin-like' '' '' '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.3scaffold3125_46475-49141' '(at5g62065 : 107.0) Encodes a Protease inhibitor/seed storage/LTP family protein. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/Par allergen (InterPro:IPR000528); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G01870.1); Has 689 Blast hits to 689 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 688; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative LTP14, Description = Putative non-specific lipid-transfer protein 14, PFAM = )' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.3scaffold5155_1811-5404' '(at2g48140 : 91.3) embryo sac development arrest 4 (EDA4); FUNCTIONS IN: lipid binding; INVOLVED IN: megagametogenesis, lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G05450.2). & (reliability: 182.6) & (original description: Putative EDA4, Description = Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin family protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.3scaffold10989_5256-10168' '(at2g48140 : 87.4) embryo sac development arrest 4 (EDA4); FUNCTIONS IN: lipid binding; INVOLVED IN: megagametogenesis, lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G05450.2). & (reliability: 174.8) & (original description: Putative BnaA03g36710D, Description = BnaA03g36710D protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.3scaffold10989_29556-32641' '(at2g48140 : 86.7) embryo sac development arrest 4 (EDA4); FUNCTIONS IN: lipid binding; INVOLVED IN: megagametogenesis, lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G05450.2). & (reliability: 173.4) & (original description: Putative EDA4, Description = Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin family protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.3scaffold30836_3497-5896' '(gnl|cdd|72939 : 95.0) no description available & (at4g33355 : 89.7) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 3 (TAIR:AT5G59320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p10973|nltpa_ricco : 89.4) Nonspecific lipid-transfer protein A (NS-LTP A) (Phospholipid transfer protein) (PLTP) - Ricinus communis (Castor bean) & (reliability: 179.4) & (original description: Putative PGSC0003DMG400001322, Description = Non-specific lipid-transfer protein A, PFAM = PF00234)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.3scaffold48364_10627-14450' '(at5g64080 : 114.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G13820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative BnaC02g42910D, Description = BnaC02g42910D protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.3scaffold49756_2180-5154' '(gnl|cdd|72937 : 96.9) no description available & (at3g22120 : 96.7) cell wall-plasma membrane linker protein homolog (CWLP); cell wall-plasma membrane linker protein (CWLP); FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22142.1); Has 335678 Blast hits to 95375 proteins in 3349 species: Archae - 1485; Bacteria - 89074; Metazoa - 114820; Fungi - 40290; Plants - 34776; Viruses - 9272; Other Eukaryotes - 45961 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative PRP1, Description = PRP1, PFAM = PF14547)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.3scaffold87323_2584-5615' '(at1g05450 : 90.9) Encodes a Protease inhibitor/seed storage/LTP family protein; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative At1g05450, Description = Protease inhibitor, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.3scaffold96401_666-3887' '(at4g14815 : 108.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative PGSC0003DMG400020131, Description = Lipid transfer protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.5scaffold113_144341-148644' '(at5g13900 : 102.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative PGSC0003DMG400020710, Description = Non-specific lipid-transfer protein, putative, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.5scaffold744_479817-482098' '(gnl|cdd|72938 : 89.5) no description available & (at3g18280 : 85.5) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G48750.1); Has 308 Blast hits to 307 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 308; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q43681|nltp_vigun : 81.6) Probable nonspecific lipid-transfer protein AKCS9 precursor (LTP) - Vigna unguiculata (Cowpea) & (reliability: 171.0) & (original description: Putative LTP9, Description = Non-specific lipid-transfer protein 2, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.5scaffold1158_411375-417191' '(at2g45180 : 110.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G46890.1); Has 782 Blast hits to 776 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 782; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p14009|14kd_dauca : 100.0) 14 kDa proline-rich protein DC2.15 precursor - Daucus carota (Carrot) & (gnl|cdd|72937 : 96.5) no description available & (reliability: 220.0) & (original description: Putative corC, Description = 14 kDa proline-rich protein DC2.15, PFAM = PF14547)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.5scaffold1467_110842-112703' '(at5g48490 : 83.2) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G48485.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative LBP, Description = Lipid binding/ Lipid transporter protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.5scaffold2633_76958-79428' '(gnl|cdd|72937 : 91.5) no description available & (at4g12490 : 80.9) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G12500.1); Has 18352 Blast hits to 7356 proteins in 861 species: Archae - 114; Bacteria - 4375; Metazoa - 2713; Fungi - 1220; Plants - 5360; Viruses - 1445; Other Eukaryotes - 3125 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative corC, Description = Lipid transfer protein, PFAM = PF14547)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.5scaffold2682_141315-143225' '(gnl|cdd|72937 : 87.3) no description available & (p14009|14kd_dauca : 82.8) 14 kDa proline-rich protein DC2.15 precursor - Daucus carota (Carrot) & (at4g12510 : 82.4) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G12520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative extA, Description = Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, PFAM = PF14547)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.5scaffold4274_5935-8474' '(gnl|cdd|72939 : 101.0) no description available & (at4g33355 : 92.4) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 3 (TAIR:AT5G59320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p10973|nltpa_ricco : 92.4) Nonspecific lipid-transfer protein A (NS-LTP A) (Phospholipid transfer protein) (PLTP) - Ricinus communis (Castor bean) & (reliability: 184.8) & (original description: Putative ltp, Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'nbv0.5scaffold10111_1061-4907' '(at3g22620 : 90.5) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: chloroplast envelope; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G05450.2); Has 884 Blast hits to 840 proteins in 101 species: Archae - 0; Bacteria - 84; Metazoa - 49; Fungi - 31; Plants - 622; Viruses - 18; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative PGSC0003DMG400032260, Description = Alpha-amylase inhibitor, lipid transfer and seed storage protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben044scf00001792ctg006_1-2362' '(at2g37870 : 97.8) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G05960.1); Has 479 Blast hits to 479 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative Sb03g039880, Description = Putative uncharacterized protein Sb03g039880, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben044scf00002528ctg003_1-2807' '(at2g48140 : 88.2) embryo sac development arrest 4 (EDA4); FUNCTIONS IN: lipid binding; INVOLVED IN: megagametogenesis, lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G05450.2). & (reliability: 176.4) & (original description: Putative EDA4, Description = At2g48140/F11L15.4, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben044scf00011950ctg000_6314-11226' '(at2g48140 : 86.7) embryo sac development arrest 4 (EDA4); FUNCTIONS IN: lipid binding; INVOLVED IN: megagametogenesis, lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G05450.2). & (reliability: 173.4) & (original description: Putative BnaA03g36710D, Description = BnaA03g36710D protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben044scf00013910ctg003_174-3383' '(at2g44300 : 107.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative MTR_3g083760, Description = Lipid transfer protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben044scf00014460ctg002_8974-18178' '(at3g43720 : 91.3) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G27130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative KK1_038798, Description = Xylogen-like protein 11, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben044scf00025094ctg003_3834-6278' '(gnl|cdd|72939 : 101.0) no description available & (p10973|nltpa_ricco : 92.8) Nonspecific lipid-transfer protein A (NS-LTP A) (Phospholipid transfer protein) (PLTP) - Ricinus communis (Castor bean) & (at4g33355 : 92.4) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 3 (TAIR:AT5G59320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative PGSC0003DMG400001322, Description = Non-specific lipid-transfer protein A, PFAM = PF00234)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben044scf00027063ctg002_11223-13618' '(at3g43720 : 80.5) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G27130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative XYP5, Description = Non-specific lipid-transfer protein-like protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben044scf00028792ctg003_1331-4485' '(at3g22600 : 108.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G14815.1); Has 1019 Blast hits to 1015 proteins in 49 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 1010; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative AtXYP8, Description = AT3g22600/F16J14_17, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben044scf00034811ctg010_37701-41543' '(at2g48140 : 86.3) embryo sac development arrest 4 (EDA4); FUNCTIONS IN: lipid binding; INVOLVED IN: megagametogenesis, lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G05450.2). & (reliability: 172.6) & (original description: Putative At1g05450, Description = Protease inhibitor, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben044scf00043634ctg001_5350-12318' '(at3g22600 : 93.6) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G14815.1); Has 1019 Blast hits to 1015 proteins in 49 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 1010; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative AtXYP8, Description = AT3g22600/F16J14_17, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben044scf00055590ctg004_1-1624' '(at2g48140 : 91.7) embryo sac development arrest 4 (EDA4); FUNCTIONS IN: lipid binding; INVOLVED IN: megagametogenesis, lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G05450.2). & (reliability: 183.4) & (original description: Putative EDA4, Description = Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin family protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf00304_503293-541155' '(at3g43720 : 91.7) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G27130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative Os01g0814100, Description = Os01g0814100 protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf00491_286889-289646' '(at1g73890 : 92.8) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G55260.2); Has 645 Blast hits to 641 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 645; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 185.6) & (original description: Putative PGSC0003DMG400005630, Description = BnaC05g14110D protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf00528_134635-137457' '(at3g07450 : 111.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, leaf whorl, sepal, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G52130.1); Has 80 Blast hits to 80 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative BnaA05g30180D, Description = BnaA05g30180D protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf00728_112260-114736' '(at3g63095 : 82.4) Encodes a Protease inhibitor/seed storage/LTP family protein; Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); Has 80052 Blast hits to 23701 proteins in 1517 species: Archae - 357; Bacteria - 20846; Metazoa - 15827; Fungi - 6834; Plants - 3473; Viruses - 635; Other Eukaryotes - 32080 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative TCM_004435, Description = Tetratricopeptide repeat-like superfamily protein, putative, PFAM = )' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf00925_127681-130073' '(gnl|cdd|72937 : 96.1) no description available & (at2g45180 : 89.4) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G46890.1); Has 782 Blast hits to 776 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 782; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p14009|14kd_dauca : 85.1) 14 kDa proline-rich protein DC2.15 precursor - Daucus carota (Carrot) & (reliability: 178.8) & (original description: Putative AIR1, Description = Putative lipid-binding protein AIR1, PFAM = PF14547)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf01051_880440-888624' '(at1g62790 : 88.6) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 314 Blast hits to 310 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 314; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative PGSC0003DMG400004782, Description = Lipid transfer-like protein VAS-like isoform 2, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf01082_292732-295271' '(gnl|cdd|72939 : 99.6) no description available & (at4g33355 : 92.8) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 3 (TAIR:AT5G59320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p10973|nltpa_ricco : 90.1) Nonspecific lipid-transfer protein A (NS-LTP A) (Phospholipid transfer protein) (PLTP) - Ricinus communis (Castor bean) & (reliability: 185.6) & (original description: Putative PGSC0003DMG400025987, Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf01082_296022-298439' '(gnl|cdd|72939 : 95.4) no description available & (at4g33355 : 94.7) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 3 (TAIR:AT5G59320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p10973|nltpa_ricco : 92.0) Nonspecific lipid-transfer protein A (NS-LTP A) (Phospholipid transfer protein) (PLTP) - Ricinus communis (Castor bean) & (reliability: 189.4) & (original description: Putative PGSC0003DMG400001322, Description = Non-specific lipid-transfer protein A, PFAM = PF00234)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf01082_298338-335274' '(gnl|cdd|72939 : 95.4) no description available & (p10973|nltpa_ricco : 88.6) Nonspecific lipid-transfer protein A (NS-LTP A) (Phospholipid transfer protein) (PLTP) - Ricinus communis (Castor bean) & (at4g33355 : 87.4) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 3 (TAIR:AT5G59320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative LTP, Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf01326_508606-511381' '(gnl|cdd|72939 : 89.2) no description available & (p10974|nltpb_ricco : 87.4) Nonspecific lipid-transfer protein B (NS-LTP B) (Phospholipid transfer protein) (PLTP) - Ricinus communis (Castor bean) & (at4g33355 : 82.4) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 3 (TAIR:AT5G59320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative PGSC0003DMG400001322, Description = Non-specific lipid-transfer protein 3, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf01569_111888-117588' '(gnl|cdd|72939 : 98.1) no description available & (at4g33355 : 89.0) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 3 (TAIR:AT5G59320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p10974|nltpb_ricco : 87.4) Nonspecific lipid-transfer protein B (NS-LTP B) (Phospholipid transfer protein) (PLTP) - Ricinus communis (Castor bean) & (reliability: 178.0) & (original description: Putative ltp, Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf01972_184724-187636' '(at3g22600 : 102.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G14815.1); Has 1019 Blast hits to 1015 proteins in 49 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 1010; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative At1g03103, Description = Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf02006_160160-163973' '(at2g44300 : 153.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative T4.9, Description = T4.9 protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf02102_172783-175193' '(at1g12100 : 110.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, embryo, flower, leaf, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G12510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p14009|14kd_dauca : 107.0) 14 kDa proline-rich protein DC2.15 precursor - Daucus carota (Carrot) & (gnl|cdd|72937 : 94.6) no description available & (reliability: 220.0) & (original description: Putative ltp2, Description = 14 kDa proline-rich protein DC2.15, PFAM = PF14547)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf02286_84180-86542' '(at2g37870 : 102.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G05960.1); Has 479 Blast hits to 479 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative BnaC04g45500D, Description = BnaC04g45500D protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf02335_309364-388534' '(at5g64080 : 104.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G13820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative LTP1, Description = Lipid transfer protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf02513_904534-908800' '(at5g64080 : 116.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G13820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative At5g64080, Description = Non-specific lipid-transfer protein-like protein At5g64080, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf02538_117986-120267' '(gnl|cdd|72938 : 91.5) no description available & (at3g18280 : 88.2) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G48750.1); Has 308 Blast hits to 307 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 308; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q43681|nltp_vigun : 82.0) Probable nonspecific lipid-transfer protein AKCS9 precursor (LTP) - Vigna unguiculata (Cowpea) & (reliability: 176.4) & (original description: Putative LTP9, Description = Non-specific lipid-transfer protein 2, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf02831_147691-149604' '(at5g48490 : 85.9) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G48485.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative LBP, Description = Lipid binding/ Lipid transporter protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf03101_10910-14287' '(at2g44300 : 107.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative Os07g0198300, Description = Lipid binding protein, putative, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf03293_41250-44093' '(at2g44300 : 127.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative AtXYP10, Description = Lipid binding protein, putative, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf03337_365573-367968' '(at4g00165 : 114.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G45180.1); Has 761 Blast hits to 755 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 761; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p14009|14kd_dauca : 99.0) 14 kDa proline-rich protein DC2.15 precursor - Daucus carota (Carrot) & (gnl|cdd|72937 : 93.1) no description available & (reliability: 228.0) & (original description: Putative corC, Description = 14 kDa proline-rich protein DC2.15, putative, PFAM = PF14547)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf03374_576423-579531' '(at1g62790 : 81.6) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 314 Blast hits to 310 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 314; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative PGSC0003DMG400012481, Description = Lipid transfer-like protein VAS-like isoform 2, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf03573_1-3714' '(at3g22620 : 88.2) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: chloroplast envelope; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G05450.2); Has 884 Blast hits to 840 proteins in 101 species: Archae - 0; Bacteria - 84; Metazoa - 49; Fungi - 31; Plants - 622; Viruses - 18; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative BnaA03g36710D, Description = BnaA03g36710D protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf04096_1173594-1176260' '(at5g62065 : 106.0) Encodes a Protease inhibitor/seed storage/LTP family protein. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/Par allergen (InterPro:IPR000528); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G01870.1); Has 689 Blast hits to 689 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 688; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative LTP14, Description = Putative non-specific lipid-transfer protein 14, PFAM = )' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf04096_1173793-1175918' '(at5g62065 : 106.0) Encodes a Protease inhibitor/seed storage/LTP family protein. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/Par allergen (InterPro:IPR000528); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G01870.1); Has 689 Blast hits to 689 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 688; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative LTP14, Description = Putative non-specific lipid-transfer protein 14, PFAM = )' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf04283_205597-208073' '(at3g63095 : 80.5) Encodes a Protease inhibitor/seed storage/LTP family protein; Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); Has 80052 Blast hits to 23701 proteins in 1517 species: Archae - 357; Bacteria - 20846; Metazoa - 15827; Fungi - 6834; Plants - 3473; Viruses - 635; Other Eukaryotes - 32080 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative MTR_1g032050, Description = AAA ATPase containing von Willebrand factor type A, PFAM = )' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf04556_448226-451482' '(at2g44300 : 176.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative YLS3, Description = Protein YLS3, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf04714_69760-72155' '(at4g00165 : 112.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G45180.1); Has 761 Blast hits to 755 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 761; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p14009|14kd_dauca : 95.9) 14 kDa proline-rich protein DC2.15 precursor - Daucus carota (Carrot) & (gnl|cdd|72937 : 93.1) no description available & (reliability: 224.0) & (original description: Putative corC, Description = 14 kDa proline-rich protein DC2.15, putative, PFAM = PF14547)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf05078_840691-846099' '(at3g43720 : 99.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G27130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative pco081246, Description = Non-specific lipid-transfer protein-like protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf05094_113859-116235' '(at5g05960 : 134.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G53980.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative At5g05960, Description = At5g05960, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf05631_145750-148040' '(gnl|cdd|72938 : 86.5) no description available & (at3g18280 : 82.8) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G48750.1); Has 308 Blast hits to 307 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 308; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative LTP, Description = Lipid transfer protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf05855_134209-136653' '(gnl|cdd|72939 : 103.0) no description available & (at4g33355 : 97.1) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 3 (TAIR:AT5G59320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p10973|nltpa_ricco : 91.7) Nonspecific lipid-transfer protein A (NS-LTP A) (Phospholipid transfer protein) (PLTP) - Ricinus communis (Castor bean) & (reliability: 194.2) & (original description: Putative BnaA02g07110D, Description = Non-specific lipid-transfer protein A, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf06205_141270-148378' '(at4g14815 : 94.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative AtXYP8, Description = AT3g22600/F16J14_17, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf06650_259848-263238' '(at3g22600 : 105.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G14815.1); Has 1019 Blast hits to 1015 proteins in 49 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 1010; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative Os07g0174400, Description = Lipid transfer protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf06819_44455-51343' '(at3g22600 : 85.9) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G14815.1); Has 1019 Blast hits to 1015 proteins in 49 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 1010; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative AtXYP7, Description = Lipid transfer protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf06819_61709-64930' '(at3g22600 : 107.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G14815.1); Has 1019 Blast hits to 1015 proteins in 49 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 1010; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative AtXYP8, Description = Lipid transfer protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf07072_7914-10195' '(gnl|cdd|72938 : 89.2) no description available & (at1g48750 : 86.3) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G18280.1); Has 285 Blast hits to 284 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 285; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative LTP9, Description = Non-specific lipid-transfer protein 2, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf07400_50626-53435' '(at5g13900 : 107.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative PGSC0003DMG400020710, Description = BnaA02g01920D protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf08679_211150-214988' '(at2g44300 : 156.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative T4.9, Description = T4.9 protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf09028_32679-36225' '(at1g18280 : 91.7) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G73560.1); Has 517 Blast hits to 515 proteins in 27 species: Archae - 0; Bacteria - 3; Metazoa - 3; Fungi - 0; Plants - 507; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative PGSC0003DMG400005678, Description = At1g18280, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf09547_333523-337091' '(at2g48140 : 87.0) embryo sac development arrest 4 (EDA4); FUNCTIONS IN: lipid binding; INVOLVED IN: megagametogenesis, lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G05450.2). & (reliability: 174.0) & (original description: Putative EDA4, Description = Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin family protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf10409_238489-240875' '(gnl|cdd|72937 : 91.9) no description available & (at2g45180 : 91.3) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G46890.1); Has 782 Blast hits to 776 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 782; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p14009|14kd_dauca : 88.6) 14 kDa proline-rich protein DC2.15 precursor - Daucus carota (Carrot) & (reliability: 182.6) & (original description: Putative corC, Description = Lipid transfer protein, PFAM = PF14547)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf11497_378748-383561' '(at2g44300 : 133.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative YLS3, Description = Putative GPI-anchored protein At1g27950 family, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf11609_7818-12730' '(at2g48140 : 84.7) embryo sac development arrest 4 (EDA4); FUNCTIONS IN: lipid binding; INVOLVED IN: megagametogenesis, lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G05450.2). & (reliability: 169.4) & (original description: Putative PGSC0003DMG400032260, Description = Lipid binding protein, putative, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf13203_1295-4015' '(gnl|cdd|72939 : 99.6) no description available & (p27631|nltp_dauca : 95.1) Nonspecific lipid-transfer protein precursor (LTP) (Extracellular protein 2) - Daucus carota (Carrot) & (at3g08770 : 88.6) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; lipid transfer protein 6 (LTP6); FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G01870.1). & (reliability: 161.8) & (original description: Putative ltp, Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf13429_191103-193513' '(at1g12100 : 110.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, embryo, flower, leaf, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G12510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p14009|14kd_dauca : 107.0) 14 kDa proline-rich protein DC2.15 precursor - Daucus carota (Carrot) & (gnl|cdd|72937 : 95.0) no description available & (reliability: 220.0) & (original description: Putative extA, Description = Lipid transfer protein, PFAM = PF14547)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf13429_350669-353681' '(gnl|cdd|72937 : 92.7) no description available & (p14009|14kd_dauca : 89.7) 14 kDa proline-rich protein DC2.15 precursor - Daucus carota (Carrot) & (at2g45180 : 87.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G46890.1); Has 782 Blast hits to 776 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 782; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative corC, Description = 14 kDa proline-rich protein DC2.15, PFAM = PF14547)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf13920_24606-27760' '(at3g22600 : 105.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G14815.1); Has 1019 Blast hits to 1015 proteins in 49 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 1010; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative AtXYP8, Description = AT3g22600/F16J14_17, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf14098_50878-53705' '(at2g10940 : 115.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: chloroplast thylakoid membrane, apoplast, chloroplast, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22142.1); Has 46369 Blast hits to 18572 proteins in 1334 species: Archae - 186; Bacteria - 10981; Metazoa - 15875; Fungi - 3500; Plants - 7556; Viruses - 1597; Other Eukaryotes - 6674 (source: NCBI BLink). & (gnl|cdd|72937 : 83.4) no description available & (reliability: 230.0) & (original description: Putative hyp1, Description = 36.4 kDa proline-rich protein, PFAM = PF14547)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf26575_1-2289' '(at1g05450 : 85.1) Encodes a Protease inhibitor/seed storage/LTP family protein; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative EDA4, Description = Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin family protein, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf26575_5288-7940' '(at3g22600 : 97.1) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G14815.1); Has 1019 Blast hits to 1015 proteins in 49 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 1010; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative LOC100283521, Description = Putative non-specific lipid-transfer protein-like protein-like, PFAM = PF14368)' T '26.21' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein' 'niben101scf37163_2069-6074' '(at5g13900 : 100.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative PGSC0003DMG400020710, Description = BnaA02g01920D protein, PFAM = PF14368)' T '26.21.1' 'misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein.protease inhibitor' '' '' '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.3scaffold2148_76913-85828' '(at5g10050 : 375.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G65205.1); Has 119739 Blast hits to 119523 proteins in 3734 species: Archae - 959; Bacteria - 78106; Metazoa - 7703; Fungi - 6506; Plants - 2887; Viruses - 2; Other Eukaryotes - 23576 (source: NCBI BLink). & (gnl|cdd|36423 : 278.0) no description available & (gnl|cdd|75413 : 166.0) no description available & (reliability: 750.0) & (original description: Putative BnaA03g02760D, Description = BnaA03g02760D protein, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.3scaffold2733_5568-12360' '(at4g23420 : 380.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G23430.2). & (gnl|cdd|36422 : 325.0) no description available & (gnl|cdd|81882 : 244.0) no description available & (reliability: 760.0) & (original description: Putative TIC32, Description = Short-chain dehydrogenase TIC 32, chloroplastic, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.3scaffold9637_36003-40984' '(at4g23430 : 193.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast, chloroplast inner membrane; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G23420.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36422 : 162.0) no description available & (gnl|cdd|81881 : 121.0) no description available & (reliability: 386.0) & (original description: Putative HP32, Description = Short-chain dehydrogenase TIC 32, chloroplastic, PFAM = )' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.3scaffold18138_26048-31375' '(at5g50700 : 417.0) Encodes a hydroxysteroid dehydrogenase HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770; HSD4 has two copies due to the same gene duplication event occurred to HSD1) (Plant Cell Physiology 50:1463). At5g50690 is also named as HSD7 (Plant Physiology 145:87). HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds; transcript disappears during germination.; hydroxysteroid dehydrogenase 1 (HSD1); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: seed; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: hydroxysteroid dehydrogenase 1 (TAIR:AT5G50600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36419 : 274.0) no description available & (gnl|cdd|81873 : 219.0) no description available & (q5kts5|grdh_dauca : 82.0) Glucose and ribitol dehydrogenase (EC 1.1.1.-) (Carrot ABA-induced in somatic embryos 5 protein) - Daucus carota (Carrot) & (reliability: 834.0) & (original description: Putative HSD1, Description = 11-beta-hydroxysteroid dehydrogenase 1A, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.3scaffold18471_3823-10268' '(at5g50130 : 446.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G24050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36422 : 301.0) no description available & (gnl|cdd|81881 : 172.0) no description available & (reliability: 892.0) & (original description: Putative HP32, Description = Short-chain dehydrogenase TIC 32, chloroplastic, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.3scaffold27989_20052-22826' '(at3g03980 : 280.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G04000.1); Has 125329 Blast hits to 125098 proteins in 3700 species: Archae - 987; Bacteria - 82672; Metazoa - 6160; Fungi - 6506; Plants - 2912; Viruses - 12; Other Eukaryotes - 26080 (source: NCBI BLink). & (q08632|sdr1_picab : 233.0) Short-chain type dehydrogenase/reductase (EC 1.-.-.-) - Picea abies (Norway spruce) (Picea excelsa) & (gnl|cdd|84399 : 212.0) no description available & (gnl|cdd|35944 : 186.0) no description available & (reliability: 560.0) & (original description: Putative fabG, Description = 3-ketoacyl-ACP reductase, PFAM = PF13561)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.3scaffold41002_1709-7267' '(at5g02540 : 333.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G37540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36422 : 272.0) no description available & (gnl|cdd|81881 : 207.0) no description available & (q01289|por_pea : 85.5) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Pisum sativum (Garden pea) & (reliability: 666.0) & (original description: Putative acr1, Description = Short-chain dehydrogenase TIC 32, chloroplastic, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.3scaffold68696_1-9616' '(at4g09750 : 476.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G24050.1); Has 75095 Blast hits to 75002 proteins in 3239 species: Archae - 588; Bacteria - 48774; Metazoa - 5574; Fungi - 4887; Plants - 2346; Viruses - 0; Other Eukaryotes - 12926 (source: NCBI BLink). & (gnl|cdd|36422 : 209.0) no description available & (gnl|cdd|81881 : 110.0) no description available & (reliability: 952.0) & (original description: Putative DHRS12, Description = Dehydrogenase/reductase SDR family member 12, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.3scaffold85530_1-5311' '(at4g10020 : 395.0) Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5.; hydroxysteroid dehydrogenase 5 (HSD5); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: hydroxysteroid dehydrogenase 1 (TAIR:AT5G50600.1); Has 75328 Blast hits to 75030 proteins in 3270 species: Archae - 807; Bacteria - 52029; Metazoa - 4592; Fungi - 3635; Plants - 1773; Viruses - 2; Other Eukaryotes - 12490 (source: NCBI BLink). & (gnl|cdd|36419 : 159.0) no description available & (gnl|cdd|81873 : 99.6) no description available & (reliability: 790.0) & (original description: Putative HSD5, Description = Hydroxysteroid 11-beta-dehydrogenase 1-like protein, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.3scaffold88628_1169-5580' '(at4g20760 : 222.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G51030.1); Has 50499 Blast hits to 50443 proteins in 2986 species: Archae - 509; Bacteria - 33822; Metazoa - 3124; Fungi - 3071; Plants - 1791; Viruses - 1; Other Eukaryotes - 8181 (source: NCBI BLink). & (gnl|cdd|36824 : 124.0) no description available & (gnl|cdd|82770 : 86.5) no description available & (reliability: 444.0) & (original description: Putative Sb08g020890, Description = Putative uncharacterized protein Sb08g020890, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.5scaffold3692_139905-143344' '(at1g52340 : 233.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 211.0) no description available & (gnl|cdd|75407 : 196.0) no description available & (p50160|ts2_maize : 186.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 420.0) & (original description: Putative sadA, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.5scaffold4811_57629-75040' '(at5g04900 : 394.0) Encodes a chlorophyll b reducatase involved in the degradation of chlorophyll b and LHCII (light harvesting complex II).; NYC1-like (NOL); FUNCTIONS IN: oxidoreductase activity, chlorophyll(ide) b reductase activity; INVOLVED IN: chlorophyll catabolic process, PSII associated light-harvesting complex II catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G13250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35944 : 150.0) no description available & (gnl|cdd|30648 : 133.0) no description available & (reliability: 788.0) & (original description: Putative NOL, Description = Chlorophyll b reductase, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.5scaffold5545_120222-125295' '(at4g09750 : 506.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G24050.1); Has 75095 Blast hits to 75002 proteins in 3239 species: Archae - 588; Bacteria - 48774; Metazoa - 5574; Fungi - 4887; Plants - 2346; Viruses - 0; Other Eukaryotes - 12926 (source: NCBI BLink). & (gnl|cdd|36422 : 232.0) no description available & (gnl|cdd|81881 : 126.0) no description available & (reliability: 1012.0) & (original description: Putative DHRS12, Description = Dehydrogenase/reductase SDR family member 12, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.5scaffold5671_5166-10516' '(at3g61220 : 382.0) NAD(P)-binding Rossmann-fold superfamily protein; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G24190.2). & (gnl|cdd|36422 : 172.0) no description available & (gnl|cdd|81632 : 114.0) no description available & (reliability: 764.0) & (original description: Putative MNR1, Description = (+)-neomenthol dehydrogenase, PFAM = PF00106;PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.5scaffold5671_5473-9329' '(at3g61220 : 137.0) NAD(P)-binding Rossmann-fold superfamily protein; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G24190.2). & (reliability: 274.0) & (original description: Putative MNR1, Description = (+)-neomenthol dehydrogenase, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'nbv0.5scaffold8915_12182-16045' '(at3g61220 : 384.0) NAD(P)-binding Rossmann-fold superfamily protein; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G24190.2). & (gnl|cdd|36422 : 182.0) no description available & (gnl|cdd|81632 : 121.0) no description available & (reliability: 768.0) & (original description: Putative MNR1, Description = (+)-neomenthol dehydrogenase, PFAM = PF00106;PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben044scf00001966ctg000_4057-14834' '(at3g61220 : 313.0) NAD(P)-binding Rossmann-fold superfamily protein; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G24190.2). & (gnl|cdd|36422 : 174.0) no description available & (gnl|cdd|81625 : 161.0) no description available & (q9tl22|rk14_nepol : 112.0) Chloroplast 50S ribosomal protein L14 - Nephroselmis olivacea & (reliability: 626.0) & (original description: Putative rplN, Description = 50S ribosomal protein L14, PFAM = PF00238;PF00106;PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben044scf00001966ctg000_14338-16731' '(at3g61220 : 155.0) NAD(P)-binding Rossmann-fold superfamily protein; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G24190.2). & (gnl|cdd|36422 : 108.0) no description available & (gnl|cdd|81882 : 80.4) no description available & (reliability: 310.0) & (original description: Putative cbr1, Description = (+)-neomenthol dehydrogenase, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben044scf00003492ctg000_140-4863' '(at2g24190 : 283.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G61220.2); Has 72615 Blast hits to 72550 proteins in 3183 species: Archae - 711; Bacteria - 48651; Metazoa - 4595; Fungi - 3717; Plants - 2402; Viruses - 0; Other Eukaryotes - 12539 (source: NCBI BLink). & (gnl|cdd|36422 : 152.0) no description available & (gnl|cdd|81632 : 99.4) no description available & (reliability: 566.0) & (original description: Putative SDR2b, Description = Short-chain dehydrogenase/reductase 2b, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben044scf00010186ctg007_13856-16945' '(at4g23420 : 159.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G23430.2). & (gnl|cdd|36422 : 115.0) no description available & (gnl|cdd|81882 : 99.2) no description available & (reliability: 318.0) & (original description: Putative acr1, Description = Short-chain dehydrogenase TIC 32, chloroplastic, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben044scf00011954ctg011_1-4604' '(at3g55290 : 332.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G55310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35944 : 196.0) no description available & (gnl|cdd|84317 : 184.0) no description available & (q93x67|fabg2_brana : 102.0) 3-oxoacyl-[acyl-carrier-protein] reductase 2, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 2) - Brassica napus (Rape) & (reliability: 664.0) & (original description: Putative BnaA02g04430D, Description = BnaA02g04430D protein, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben044scf00013648ctg004_63449-67921' '(at5g04900 : 179.0) Encodes a chlorophyll b reducatase involved in the degradation of chlorophyll b and LHCII (light harvesting complex II).; NYC1-like (NOL); FUNCTIONS IN: oxidoreductase activity, chlorophyll(ide) b reductase activity; INVOLVED IN: chlorophyll catabolic process, PSII associated light-harvesting complex II catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G13250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative NOL, Description = Chlorophyll(Ide) b reductase NOL, chloroplastic, PFAM = )' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben044scf00013789ctg020_1323-4664' '(at3g03980 : 309.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G04000.1); Has 125329 Blast hits to 125098 proteins in 3700 species: Archae - 987; Bacteria - 82672; Metazoa - 6160; Fungi - 6506; Plants - 2912; Viruses - 12; Other Eukaryotes - 26080 (source: NCBI BLink). & (q08632|sdr1_picab : 255.0) Short-chain type dehydrogenase/reductase (EC 1.-.-.-) - Picea abies (Norway spruce) (Picea excelsa) & (gnl|cdd|84399 : 227.0) no description available & (gnl|cdd|35944 : 201.0) no description available & (reliability: 618.0) & (original description: Putative fabG, Description = 3-ketoacyl-ACP reductase, PFAM = PF13561)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben044scf00016456ctg006_7707-10065' '(at4g05530 : 180.0) Encodes a peroxisomal member of the short-chain dehydrogenase/reductase (SDR) family of enzymes. Loss of IBR1 function causes increased resistance to indole-3-butyric acid without affecting plant responses to IAA, NAA, and 2,4-D. This enzyme may be responsible for catalyzing a dehydrogenation step in the beta-oxidation-like conversion of IBA to IAA.; indole-3-butyric acid response 1 (IBR1); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: root hair elongation, indolebutyric acid metabolic process, response to indolebutyric acid stimulus; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82354 : 128.0) no description available & (gnl|cdd|35944 : 126.0) no description available & (reliability: 360.0) & (original description: Putative dhrs4, Description = Dehydrogenase/reductase SDR family member 4, PFAM = PF13561)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben044scf00019410ctg004_1664-8676' '(at5g04070 : 321.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G15940.1); Has 38503 Blast hits to 38471 proteins in 2813 species: Archae - 360; Bacteria - 23739; Metazoa - 3799; Fungi - 2489; Plants - 1519; Viruses - 0; Other Eukaryotes - 6597 (source: NCBI BLink). & (gnl|cdd|36422 : 190.0) no description available & (gnl|cdd|81882 : 141.0) no description available & (reliability: 642.0) & (original description: Putative At5g04070, Description = At5g04070, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben044scf00021802ctg003_11296-16444' '(at3g61220 : 328.0) NAD(P)-binding Rossmann-fold superfamily protein; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G24190.2). & (gnl|cdd|36422 : 179.0) no description available & (gnl|cdd|31231 : 117.0) no description available & (reliability: 656.0) & (original description: Putative SDR1, Description = (+)-neomenthol dehydrogenase, PFAM = PF00106;PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben044scf00037009ctg000_28701-33124' '(at3g51680 : 371.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon, root; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26770.1); Has 119773 Blast hits to 119555 proteins in 3701 species: Archae - 1000; Bacteria - 77051; Metazoa - 6334; Fungi - 6742; Plants - 2947; Viruses - 5; Other Eukaryotes - 25694 (source: NCBI BLink). & (p50160|ts2_maize : 340.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|35944 : 218.0) no description available & (gnl|cdd|75407 : 189.0) no description available & (reliability: 742.0) & (original description: Putative SDR2a, Description = Short-chain dehydrogenase reductase 2a, PFAM = PF13561;PF13561)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben044scf00053668ctg002_1261-15184' '(at3g61220 : 124.0) NAD(P)-binding Rossmann-fold superfamily protein; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G24190.2). & (gnl|cdd|36422 : 106.0) no description available & (gnl|cdd|81632 : 80.6) no description available & (reliability: 248.0) & (original description: Putative MNR1, Description = (+)-neomenthol dehydrogenase, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf00247_422848-462458' '(at4g03140 : 335.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26760.1); Has 115095 Blast hits to 114901 proteins in 3526 species: Archae - 967; Bacteria - 76065; Metazoa - 4961; Fungi - 5951; Plants - 2443; Viruses - 5; Other Eukaryotes - 24703 (source: NCBI BLink). & (gnl|cdd|82237 : 192.0) no description available & (gnl|cdd|35944 : 191.0) no description available & (p50160|ts2_maize : 190.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 670.0) & (original description: Putative SDR3a, Description = Short-chain dehydrogenase reductase 3a, PFAM = PF13561)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf00247_457815-462664' '(at4g03140 : 334.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26760.1); Has 115095 Blast hits to 114901 proteins in 3526 species: Archae - 967; Bacteria - 76065; Metazoa - 4961; Fungi - 5951; Plants - 2443; Viruses - 5; Other Eukaryotes - 24703 (source: NCBI BLink). & (gnl|cdd|35944 : 192.0) no description available & (gnl|cdd|82237 : 192.0) no description available & (p50160|ts2_maize : 190.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 668.0) & (original description: Putative SDR2a, Description = Short-chain dehydrogenase reductase 2a, PFAM = PF13561)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf00388_289088-301491' '(at5g10050 : 200.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G65205.1); Has 119739 Blast hits to 119523 proteins in 3734 species: Archae - 959; Bacteria - 78106; Metazoa - 7703; Fungi - 6506; Plants - 2887; Viruses - 2; Other Eukaryotes - 23576 (source: NCBI BLink). & (gnl|cdd|36423 : 199.0) no description available & (gnl|cdd|81874 : 186.0) no description available & (reliability: 400.0) & (original description: Putative BnaC03g04080D, Description = BnaC03g04080D protein, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf00419_856712-859299' '(at3g55310 : 177.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, fatty acid elongation, unsaturated fatty acid, metabolic process, fatty acid elongation, saturated fatty acid; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G55290.2); Has 128636 Blast hits to 128424 proteins in 3690 species: Archae - 1019; Bacteria - 82614; Metazoa - 6888; Fungi - 6972; Plants - 3216; Viruses - 5; Other Eukaryotes - 27922 (source: NCBI BLink). & (gnl|cdd|35944 : 102.0) no description available & (gnl|cdd|31231 : 97.6) no description available & (reliability: 354.0) & (original description: Putative KK1_003437, Description = Putative oxidoreductase Lmo0432 family, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf00448_2256423-2260413' '(at5g50700 : 350.0) Encodes a hydroxysteroid dehydrogenase HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770; HSD4 has two copies due to the same gene duplication event occurred to HSD1) (Plant Cell Physiology 50:1463). At5g50690 is also named as HSD7 (Plant Physiology 145:87). HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds; transcript disappears during germination.; hydroxysteroid dehydrogenase 1 (HSD1); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: seed; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: hydroxysteroid dehydrogenase 1 (TAIR:AT5G50600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36419 : 235.0) no description available & (gnl|cdd|81873 : 190.0) no description available & (reliability: 700.0) & (original description: Putative HSD1, Description = 11-beta-hydroxysteroid dehydrogenase 1A, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf00595_208251-216432' '(at4g11410 : 414.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G23430.2); Has 42058 Blast hits to 41993 proteins in 2806 species: Archae - 320; Bacteria - 26803; Metazoa - 3444; Fungi - 2870; Plants - 1627; Viruses - 0; Other Eukaryotes - 6994 (source: NCBI BLink). & (gnl|cdd|36422 : 329.0) no description available & (gnl|cdd|81881 : 236.0) no description available & (q01289|por_pea : 110.0) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Pisum sativum (Garden pea) & (reliability: 828.0) & (original description: Putative rdh13, Description = Retinol dehydrogenase 13, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf00595_264804-271596' '(at4g23420 : 379.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G23430.2). & (gnl|cdd|36422 : 325.0) no description available & (gnl|cdd|81882 : 243.0) no description available & (reliability: 758.0) & (original description: Putative TIC32, Description = Short-chain dehydrogenase TIC 32, chloroplastic, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf00595_265224-271467' '(at4g23420 : 317.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G23430.2). & (gnl|cdd|36422 : 267.0) no description available & (gnl|cdd|81882 : 216.0) no description available & (reliability: 634.0) & (original description: Putative acr1, Description = Short-chain dehydrogenase TIC 32, chloroplastic, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf00684_7727-13737' '(at5g02540 : 415.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G37540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36422 : 328.0) no description available & (gnl|cdd|81881 : 241.0) no description available & (q01289|por_pea : 86.3) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Pisum sativum (Garden pea) & (reliability: 830.0) & (original description: Putative Rdh11, Description = Retinol dehydrogenase 11, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf00713_306959-320015' '(at5g02540 : 409.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G37540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36422 : 332.0) no description available & (gnl|cdd|81881 : 232.0) no description available & (q01289|por_pea : 94.7) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Pisum sativum (Garden pea) & (reliability: 818.0) & (original description: Putative RDH14, Description = Retinol dehydrogenase 14, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf00915_282866-288756' '(at5g50700 : 296.0) Encodes a hydroxysteroid dehydrogenase HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770; HSD4 has two copies due to the same gene duplication event occurred to HSD1) (Plant Cell Physiology 50:1463). At5g50690 is also named as HSD7 (Plant Physiology 145:87). HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds; transcript disappears during germination.; hydroxysteroid dehydrogenase 1 (HSD1); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: seed; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: hydroxysteroid dehydrogenase 1 (TAIR:AT5G50600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36419 : 231.0) no description available & (gnl|cdd|81873 : 189.0) no description available & (q5kts5|grdh_dauca : 91.7) Glucose and ribitol dehydrogenase (EC 1.1.1.-) (Carrot ABA-induced in somatic embryos 5 protein) - Daucus carota (Carrot) & (reliability: 592.0) & (original description: Putative HSD1, Description = Hydroxysteroid 11-beta-dehydrogenase 1-like protein, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf01403_173497-179722' '(at5g51030 : 455.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G61830.1); Has 71841 Blast hits to 71789 proteins in 3167 species: Archae - 666; Bacteria - 49161; Metazoa - 4545; Fungi - 3057; Plants - 2484; Viruses - 2; Other Eukaryotes - 11926 (source: NCBI BLink). & (gnl|cdd|36422 : 206.0) no description available & (gnl|cdd|31231 : 115.0) no description available & (reliability: 910.0) & (original description: Putative glysoja_034657, Description = (+)-neomenthol dehydrogenase, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf01440_257879-261040' '(at1g52340 : 237.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (p50160|ts2_maize : 211.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|35944 : 201.0) no description available & (gnl|cdd|82237 : 187.0) no description available & (reliability: 470.0) & (original description: Putative 8D10, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf01814_164814-169353' '(at3g50560 : 348.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G10050.1); Has 28315 Blast hits to 28305 proteins in 2489 species: Archae - 298; Bacteria - 21162; Metazoa - 1441; Fungi - 797; Plants - 407; Viruses - 0; Other Eukaryotes - 4210 (source: NCBI BLink). & (gnl|cdd|36232 : 191.0) no description available & (gnl|cdd|30648 : 101.0) no description available & (reliability: 696.0) & (original description: Putative Sb07g023170, Description = Putative uncharacterized protein Sb07g023170, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf01841_437708-443919' '(at2g37540 : 376.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: pollen tube growth; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G02540.1); Has 68340 Blast hits to 68248 proteins in 3185 species: Archae - 570; Bacteria - 45342; Metazoa - 4477; Fungi - 4309; Plants - 2410; Viruses - 0; Other Eukaryotes - 11232 (source: NCBI BLink). & (gnl|cdd|36422 : 306.0) no description available & (gnl|cdd|81882 : 212.0) no description available & (q01289|por_pea : 90.1) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Pisum sativum (Garden pea) & (reliability: 752.0) & (original description: Putative wwox, Description = Short-chain dehydrogenase TIC 32, chloroplastic, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf01841_438064-443992' '(at2g37540 : 414.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: pollen tube growth; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G02540.1); Has 68340 Blast hits to 68248 proteins in 3185 species: Archae - 570; Bacteria - 45342; Metazoa - 4477; Fungi - 4309; Plants - 2410; Viruses - 0; Other Eukaryotes - 11232 (source: NCBI BLink). & (gnl|cdd|36422 : 330.0) no description available & (gnl|cdd|81881 : 224.0) no description available & (q01289|por_pea : 89.7) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Pisum sativum (Garden pea) & (reliability: 828.0) & (original description: Putative RDH13, Description = Retinol dehydrogenase 13 (All-trans/9-cis), PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf01841_445490-451869' '(at5g02540 : 428.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G37540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36422 : 333.0) no description available & (gnl|cdd|81881 : 231.0) no description available & (q01289|por_pea : 82.4) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Pisum sativum (Garden pea) & (reliability: 856.0) & (original description: Putative Rdh12, Description = Retinol dehydrogenase 12, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf01897_343336-347827' '(at3g51680 : 364.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon, root; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26770.1); Has 119773 Blast hits to 119555 proteins in 3701 species: Archae - 1000; Bacteria - 77051; Metazoa - 6334; Fungi - 6742; Plants - 2947; Viruses - 5; Other Eukaryotes - 25694 (source: NCBI BLink). & (p50160|ts2_maize : 333.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|35944 : 217.0) no description available & (gnl|cdd|75407 : 185.0) no description available & (reliability: 728.0) & (original description: Putative SDR2a, Description = Short-chain dehydrogenase reductase 2a, PFAM = PF13561;PF13561)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf02027_75044-79510' '(at5g51030 : 452.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G61830.1); Has 71841 Blast hits to 71789 proteins in 3167 species: Archae - 666; Bacteria - 49161; Metazoa - 4545; Fungi - 3057; Plants - 2484; Viruses - 2; Other Eukaryotes - 11926 (source: NCBI BLink). & (gnl|cdd|36422 : 213.0) no description available & (gnl|cdd|81679 : 120.0) no description available & (reliability: 904.0) & (original description: Putative CBR1, Description = Carbonyl reductase [NADPH] 1, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf02073_578083-584388' '(at4g10020 : 514.0) Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5.; hydroxysteroid dehydrogenase 5 (HSD5); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: hydroxysteroid dehydrogenase 1 (TAIR:AT5G50600.1); Has 75328 Blast hits to 75030 proteins in 3270 species: Archae - 807; Bacteria - 52029; Metazoa - 4592; Fungi - 3635; Plants - 1773; Viruses - 2; Other Eukaryotes - 12490 (source: NCBI BLink). & (gnl|cdd|36419 : 239.0) no description available & (gnl|cdd|81873 : 160.0) no description available & (reliability: 1028.0) & (original description: Putative HSD5, Description = 11-beta-hydroxysteroid dehydrogenase-like 5, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf02497_19415-32110' '(at3g61220 : 367.0) NAD(P)-binding Rossmann-fold superfamily protein; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G24190.2). & (gnl|cdd|36422 : 175.0) no description available & (gnl|cdd|81632 : 122.0) no description available & (reliability: 734.0) & (original description: Putative SDR1, Description = (+)-neomenthol dehydrogenase, PFAM = PF00106;PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf02576_95259-102897' '(at4g23430 : 402.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast, chloroplast inner membrane; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G23420.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36422 : 337.0) no description available & (gnl|cdd|81881 : 266.0) no description available & (reliability: 804.0) & (original description: Putative TIC32, Description = Short-chain dehydrogenase TIC 32, chloroplastic, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf02581_76156-81469' '(at5g51030 : 447.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G61830.1); Has 71841 Blast hits to 71789 proteins in 3167 species: Archae - 666; Bacteria - 49161; Metazoa - 4545; Fungi - 3057; Plants - 2484; Viruses - 2; Other Eukaryotes - 11926 (source: NCBI BLink). & (gnl|cdd|36422 : 211.0) no description available & (gnl|cdd|31231 : 118.0) no description available & (reliability: 894.0) & (original description: Putative CBR1, Description = Carbonyl reductase [NADPH] 1, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf03000_197614-202941' '(at3g01980 : 336.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G55290.2); Has 52487 Blast hits to 52467 proteins in 3078 species: Archae - 436; Bacteria - 38325; Metazoa - 1234; Fungi - 2083; Plants - 1279; Viruses - 0; Other Eukaryotes - 9130 (source: NCBI BLink). & (gnl|cdd|35944 : 147.0) no description available & (gnl|cdd|31231 : 115.0) no description available & (reliability: 672.0) & (original description: Putative ADH, Description = Alcohol dehydrogenase, PFAM = PF13561)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf03018_2145678-2163089' '(at5g04900 : 475.0) Encodes a chlorophyll b reducatase involved in the degradation of chlorophyll b and LHCII (light harvesting complex II).; NYC1-like (NOL); FUNCTIONS IN: oxidoreductase activity, chlorophyll(ide) b reductase activity; INVOLVED IN: chlorophyll catabolic process, PSII associated light-harvesting complex II catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G13250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35944 : 150.0) no description available & (gnl|cdd|30648 : 133.0) no description available & (reliability: 950.0) & (original description: Putative NOL, Description = Chlorophyll(ide) b reductase NOL, chloroplastic, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf03159_77214-80137' '(at2g47140 : 288.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G47130.1); Has 112960 Blast hits to 112749 proteins in 3532 species: Archae - 956; Bacteria - 74077; Metazoa - 4904; Fungi - 6164; Plants - 2566; Viruses - 5; Other Eukaryotes - 24288 (source: NCBI BLink). & (p50160|ts2_maize : 199.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|35944 : 197.0) no description available & (gnl|cdd|82618 : 163.0) no description available & (reliability: 576.0) & (original description: Putative SDR3b, Description = Short-chain dehydrogenase reductase 3b, PFAM = PF13561)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf03370_981833-986833' '(at3g55290 : 388.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G55310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35944 : 192.0) no description available & (gnl|cdd|81679 : 175.0) no description available & (q08632|sdr1_picab : 96.7) Short-chain type dehydrogenase/reductase (EC 1.-.-.-) - Picea abies (Norway spruce) (Picea excelsa) & (reliability: 776.0) & (original description: Putative At3g55290, Description = Putative oxidoreductase, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf03445_693212-699657' '(at5g50130 : 436.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G24050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36422 : 292.0) no description available & (gnl|cdd|81882 : 165.0) no description available & (reliability: 872.0) & (original description: Putative TIC32, Description = Short-chain dehydrogenase TIC 32, chloroplastic, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf03546_227281-232262' '(at4g05530 : 304.0) Encodes a peroxisomal member of the short-chain dehydrogenase/reductase (SDR) family of enzymes. Loss of IBR1 function causes increased resistance to indole-3-butyric acid without affecting plant responses to IAA, NAA, and 2,4-D. This enzyme may be responsible for catalyzing a dehydrogenation step in the beta-oxidation-like conversion of IBA to IAA.; indole-3-butyric acid response 1 (IBR1); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: root hair elongation, indolebutyric acid metabolic process, response to indolebutyric acid stimulus; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35944 : 193.0) no description available & (gnl|cdd|82354 : 193.0) no description available & (reliability: 608.0) & (original description: Putative hdhA, Description = Dehydrogenase/reductase SDR family member 4, PFAM = PF13561)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf03886_509693-514328' '(at5g50700 : 437.0) Encodes a hydroxysteroid dehydrogenase HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770; HSD4 has two copies due to the same gene duplication event occurred to HSD1) (Plant Cell Physiology 50:1463). At5g50690 is also named as HSD7 (Plant Physiology 145:87). HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds; transcript disappears during germination.; hydroxysteroid dehydrogenase 1 (HSD1); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: seed; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: hydroxysteroid dehydrogenase 1 (TAIR:AT5G50600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36419 : 265.0) no description available & (gnl|cdd|81873 : 203.0) no description available & (q5kts5|grdh_dauca : 82.4) Glucose and ribitol dehydrogenase (EC 1.1.1.-) (Carrot ABA-induced in somatic embryos 5 protein) - Daucus carota (Carrot) & (reliability: 874.0) & (original description: Putative HSD1, Description = 11-beta-hydroxysteroid dehydrogenase 1A, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf04063_10208-31310' '(at1g24470 : 348.0) Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene.; beta-ketoacyl reductase 2 (KCR2); FUNCTIONS IN: oxidoreductase activity, ketoreductase activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: beta-ketoacyl reductase 1 (TAIR:AT1G67730.1); Has 80088 Blast hits to 80001 proteins in 3265 species: Archae - 726; Bacteria - 55481; Metazoa - 4714; Fungi - 3206; Plants - 2039; Viruses - 0; Other Eukaryotes - 13922 (source: NCBI BLink). & (gnl|cdd|36232 : 239.0) no description available & (gnl|cdd|30648 : 156.0) no description available & (reliability: 696.0) & (original description: Putative KCR2, Description = Very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf04119_355-22159' '(at1g10310 : 322.0) encodes a NADPH-dependent pterin aldehyde reductase that accepts pterin aldehyde as well as dihydropterin aldehyde as substrates involved in metabolism and salvage of folate and its derivatives.; NAD(P)-binding Rossmann-fold superfamily protein; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G55290.2); Has 116138 Blast hits to 115933 proteins in 3618 species: Archae - 897; Bacteria - 77623; Metazoa - 6898; Fungi - 5998; Plants - 2845; Viruses - 2; Other Eukaryotes - 21875 (source: NCBI BLink). & (gnl|cdd|81679 : 146.0) no description available & (gnl|cdd|35944 : 136.0) no description available & (reliability: 644.0) & (original description: Putative At1g10310, Description = NADPH-dependent pterin aldehyde reductase, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf04167_57933-61783' '(at3g51680 : 368.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon, root; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26770.1); Has 119773 Blast hits to 119555 proteins in 3701 species: Archae - 1000; Bacteria - 77051; Metazoa - 6334; Fungi - 6742; Plants - 2947; Viruses - 5; Other Eukaryotes - 25694 (source: NCBI BLink). & (p50160|ts2_maize : 319.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|35944 : 216.0) no description available & (gnl|cdd|81632 : 186.0) no description available & (reliability: 736.0) & (original description: Putative SDR2a, Description = Short-chain dehydrogenase reductase 2a, PFAM = PF13561;PF13561)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf04473_1092887-1098292' '(at3g55290 : 339.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G55310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35944 : 198.0) no description available & (gnl|cdd|84317 : 184.0) no description available & (q93x62|fabg1_brana : 103.0) 3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 1) (Beta-keto acyl-carrier protein reductase 1) - Brassica napus (Rape) & (reliability: 678.0) & (original description: Putative BnaA02g04430D, Description = BnaA02g04430D protein, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf04641_56278-59244' '(at1g52340 : 206.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 184.0) no description available & (p50160|ts2_maize : 162.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|81825 : 162.0) no description available & (reliability: 372.0) & (original description: Putative sadA, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf04641_141600-144793' '(at1g52340 : 211.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 189.0) no description available & (p50160|ts2_maize : 164.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|81825 : 162.0) no description available & (reliability: 394.0) & (original description: Putative sadA, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf04895_155157-171041' '(at3g61220 : 340.0) NAD(P)-binding Rossmann-fold superfamily protein; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G24190.2). & (gnl|cdd|36422 : 156.0) no description available & (gnl|cdd|31231 : 106.0) no description available & (reliability: 680.0) & (original description: Putative MNR1, Description = (+)-neomenthol dehydrogenase, PFAM = PF13561;PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf05035_104375-110601' '(at4g13250 : 631.0) Encodes a chlorophyll b reductase involved in the degradation of chlorophyll b and LHCII (light harvesting complex II).; NON-YELLOW COLORING 1 (NYC1); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NYC1-like (TAIR:AT5G04900.1). & (gnl|cdd|35944 : 149.0) no description available & (gnl|cdd|31231 : 119.0) no description available & (reliability: 1262.0) & (original description: Putative NYC1, Description = Probable chlorophyll(ide) b reductase NYC1, chloroplastic, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf05078_812262-827621' '(at2g24190 : 288.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G61220.2); Has 72615 Blast hits to 72550 proteins in 3183 species: Archae - 711; Bacteria - 48651; Metazoa - 4595; Fungi - 3717; Plants - 2402; Viruses - 0; Other Eukaryotes - 12539 (source: NCBI BLink). & (gnl|cdd|36422 : 153.0) no description available & (gnl|cdd|31231 : 105.0) no description available & (reliability: 576.0) & (original description: Putative MNR1, Description = (+)-neomenthol dehydrogenase, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf05118_309198-321055' '(at3g61220 : 285.0) NAD(P)-binding Rossmann-fold superfamily protein; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G24190.2). & (gnl|cdd|36422 : 158.0) no description available & (gnl|cdd|31231 : 104.0) no description available & (reliability: 570.0) & (original description: Putative MNR1, Description = (+)-neomenthol dehydrogenase, PFAM = PF13561;PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf05688_918210-935620' '(at3g12800 : 438.0) short-chain dehydrogenase-reductase B (SDRB); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: peroxisome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G07640.1); Has 108804 Blast hits to 108592 proteins in 3545 species: Archae - 967; Bacteria - 72835; Metazoa - 4412; Fungi - 5364; Plants - 2598; Viruses - 2; Other Eukaryotes - 22626 (source: NCBI BLink). & (gnl|cdd|82284 : 225.0) no description available & (gnl|cdd|35944 : 176.0) no description available & (q5kts5|grdh_dauca : 97.4) Glucose and ribitol dehydrogenase (EC 1.1.1.-) (Carrot ABA-induced in somatic embryos 5 protein) - Daucus carota (Carrot) & (reliability: 876.0) & (original description: Putative decR, Description = Peroxisomal 2,4-dienoyl-CoA reductase, PFAM = PF13561)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf05767_728190-730987' '(at3g03980 : 307.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G04000.1); Has 125329 Blast hits to 125098 proteins in 3700 species: Archae - 987; Bacteria - 82672; Metazoa - 6160; Fungi - 6506; Plants - 2912; Viruses - 12; Other Eukaryotes - 26080 (source: NCBI BLink). & (q08632|sdr1_picab : 250.0) Short-chain type dehydrogenase/reductase (EC 1.-.-.-) - Picea abies (Norway spruce) (Picea excelsa) & (gnl|cdd|84399 : 224.0) no description available & (gnl|cdd|35944 : 203.0) no description available & (reliability: 614.0) & (original description: Putative fabG, Description = 3-ketoacyl-ACP reductase, PFAM = PF13561)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf05813_770884-774918' '(at3g50560 : 302.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G10050.1); Has 28315 Blast hits to 28305 proteins in 2489 species: Archae - 298; Bacteria - 21162; Metazoa - 1441; Fungi - 797; Plants - 407; Viruses - 0; Other Eukaryotes - 4210 (source: NCBI BLink). & (gnl|cdd|36232 : 182.0) no description available & (gnl|cdd|30648 : 100.0) no description available & (reliability: 604.0) & (original description: Putative Os08g0476300, Description = Os08g0476300 protein, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf06186_639508-647410' '(at4g23420 : 361.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G23430.2). & (gnl|cdd|36422 : 319.0) no description available & (gnl|cdd|81881 : 241.0) no description available & (reliability: 722.0) & (original description: Putative RDH14, Description = Retinol dehydrogenase 14, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf06898_316587-324888' '(at4g20760 : 434.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G51030.1); Has 50499 Blast hits to 50443 proteins in 2986 species: Archae - 509; Bacteria - 33822; Metazoa - 3124; Fungi - 3071; Plants - 1791; Viruses - 1; Other Eukaryotes - 8181 (source: NCBI BLink). & (gnl|cdd|36824 : 215.0) no description available & (gnl|cdd|82770 : 187.0) no description available & (reliability: 868.0) & (original description: Putative csgA, Description = Cell-cell signaling protein, C-factor, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf07402_34732-40691' '(at4g05530 : 296.0) Encodes a peroxisomal member of the short-chain dehydrogenase/reductase (SDR) family of enzymes. Loss of IBR1 function causes increased resistance to indole-3-butyric acid without affecting plant responses to IAA, NAA, and 2,4-D. This enzyme may be responsible for catalyzing a dehydrogenation step in the beta-oxidation-like conversion of IBA to IAA.; indole-3-butyric acid response 1 (IBR1); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: root hair elongation, indolebutyric acid metabolic process, response to indolebutyric acid stimulus; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82354 : 200.0) no description available & (gnl|cdd|35944 : 194.0) no description available & (reliability: 592.0) & (original description: Putative fabG, Description = Dehydrogenase/reductase SDR family member 4, PFAM = PF13561)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf07579_331537-337530' '(at5g51030 : 433.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G61830.1); Has 71841 Blast hits to 71789 proteins in 3167 species: Archae - 666; Bacteria - 49161; Metazoa - 4545; Fungi - 3057; Plants - 2484; Viruses - 2; Other Eukaryotes - 11926 (source: NCBI BLink). & (gnl|cdd|36422 : 210.0) no description available & (gnl|cdd|31231 : 122.0) no description available & (reliability: 866.0) & (original description: Putative Cbr1, Description = Carbonyl reductase [NADPH] 1, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf08308_3927-11165' '(at4g09750 : 530.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G24050.1); Has 75095 Blast hits to 75002 proteins in 3239 species: Archae - 588; Bacteria - 48774; Metazoa - 5574; Fungi - 4887; Plants - 2346; Viruses - 0; Other Eukaryotes - 12926 (source: NCBI BLink). & (gnl|cdd|36422 : 227.0) no description available & (gnl|cdd|81881 : 123.0) no description available & (reliability: 1060.0) & (original description: Putative DHRS12, Description = Dehydrogenase/reductase SDR family member 12, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf08390_351606-355409' '(at1g52340 : 201.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 186.0) no description available & (gnl|cdd|82618 : 180.0) no description available & (p50160|ts2_maize : 178.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 400.0) & (original description: Putative 8D10, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf09360_323708-326807' '(at2g47140 : 271.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G47130.1); Has 112960 Blast hits to 112749 proteins in 3532 species: Archae - 956; Bacteria - 74077; Metazoa - 4904; Fungi - 6164; Plants - 2566; Viruses - 5; Other Eukaryotes - 24288 (source: NCBI BLink). & (gnl|cdd|35944 : 193.0) no description available & (p50160|ts2_maize : 188.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|82618 : 164.0) no description available & (reliability: 542.0) & (original description: Putative SDR3b, Description = Short-chain dehydrogenase reductase 3b, PFAM = PF13561)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf10834_93618-105413' '(at3g03330 : 428.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G03350.1); Has 112445 Blast hits to 112247 proteins in 3561 species: Archae - 906; Bacteria - 75731; Metazoa - 6658; Fungi - 6086; Plants - 2548; Viruses - 2; Other Eukaryotes - 20514 (source: NCBI BLink). & (gnl|cdd|36419 : 217.0) no description available & (gnl|cdd|30648 : 160.0) no description available & (reliability: 856.0) & (original description: Putative BnaC05g47840D, Description = BnaC05g47840D protein, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf10938_27684-31547' '(at3g61220 : 270.0) NAD(P)-binding Rossmann-fold superfamily protein; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G24190.2). & (gnl|cdd|36422 : 133.0) no description available & (gnl|cdd|31231 : 103.0) no description available & (reliability: 540.0) & (original description: Putative MNR1, Description = (+)-neomenthol dehydrogenase, PFAM = PF13561)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf10938_30670-74518' '(at3g61220 : 325.0) NAD(P)-binding Rossmann-fold superfamily protein; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G24190.2). & (gnl|cdd|36422 : 176.0) no description available & (gnl|cdd|81625 : 164.0) no description available & (q9tl22|rk14_nepol : 115.0) Chloroplast 50S ribosomal protein L14 - Nephroselmis olivacea & (reliability: 650.0) & (original description: Putative rplN, Description = 50S ribosomal protein L14, PFAM = PF00238;PF00106;PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf14394_5038-10412' '(at4g24050 : 478.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G64590.1); Has 59308 Blast hits to 59247 proteins in 3068 species: Archae - 448; Bacteria - 39701; Metazoa - 3820; Fungi - 3579; Plants - 1905; Viruses - 0; Other Eukaryotes - 9855 (source: NCBI BLink). & (gnl|cdd|36422 : 301.0) no description available & (gnl|cdd|81882 : 179.0) no description available & (q01289|por_pea : 85.5) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Pisum sativum (Garden pea) & (reliability: 956.0) & (original description: Putative TIC32, Description = Short-chain dehydrogenase TIC 32, chloroplastic, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf14679_64392-67219' '(at1g52340 : 208.0) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.; ABA DEFICIENT 2 (ABA2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51680.1); Has 120353 Blast hits to 120130 proteins in 3578 species: Archae - 983; Bacteria - 78428; Metazoa - 5777; Fungi - 6239; Plants - 2770; Viruses - 5; Other Eukaryotes - 26151 (source: NCBI BLink). & (gnl|cdd|35944 : 195.0) no description available & (p50160|ts2_maize : 185.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|81825 : 179.0) no description available & (reliability: 402.0) & (original description: Putative sadA, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf14958_151960-158673' '(at5g50700 : 417.0) Encodes a hydroxysteroid dehydrogenase HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770; HSD4 has two copies due to the same gene duplication event occurred to HSD1) (Plant Cell Physiology 50:1463). At5g50690 is also named as HSD7 (Plant Physiology 145:87). HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds; transcript disappears during germination.; hydroxysteroid dehydrogenase 1 (HSD1); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: seed; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: hydroxysteroid dehydrogenase 1 (TAIR:AT5G50600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36419 : 274.0) no description available & (gnl|cdd|81873 : 219.0) no description available & (q5kts5|grdh_dauca : 82.0) Glucose and ribitol dehydrogenase (EC 1.1.1.-) (Carrot ABA-induced in somatic embryos 5 protein) - Daucus carota (Carrot) & (reliability: 834.0) & (original description: Putative HSD1, Description = 11-beta-hydroxysteroid dehydrogenase 1A, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf15286_61692-64474' '(at3g29250 : 258.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G29260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35944 : 202.0) no description available & (p50160|ts2_maize : 191.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|81679 : 182.0) no description available & (reliability: 516.0) & (original description: Putative sadA, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf15286_82181-109503' '(at2g47140 : 218.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G47130.1); Has 112960 Blast hits to 112749 proteins in 3532 species: Archae - 956; Bacteria - 74077; Metazoa - 4904; Fungi - 6164; Plants - 2566; Viruses - 5; Other Eukaryotes - 24288 (source: NCBI BLink). & (gnl|cdd|35944 : 208.0) no description available & (gnl|cdd|81679 : 182.0) no description available & (p50160|ts2_maize : 154.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 436.0) & (original description: Putative sadA, Description = Short-chain alcohol dehydrogenase A, PFAM = PF13561)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf15760_5495-8656' '(at3g51680 : 235.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon, root; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26770.1); Has 119773 Blast hits to 119555 proteins in 3701 species: Archae - 1000; Bacteria - 77051; Metazoa - 6334; Fungi - 6742; Plants - 2947; Viruses - 5; Other Eukaryotes - 25694 (source: NCBI BLink). & (p50160|ts2_maize : 206.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (gnl|cdd|35944 : 198.0) no description available & (gnl|cdd|82237 : 188.0) no description available & (reliability: 470.0) & (original description: Putative 8D10, Description = Short chain alcohol dehydrogenase, putative, PFAM = PF13561)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf15963_155484-161342' '(at4g10020 : 501.0) Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5.; hydroxysteroid dehydrogenase 5 (HSD5); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: hydroxysteroid dehydrogenase 1 (TAIR:AT5G50600.1); Has 75328 Blast hits to 75030 proteins in 3270 species: Archae - 807; Bacteria - 52029; Metazoa - 4592; Fungi - 3635; Plants - 1773; Viruses - 2; Other Eukaryotes - 12490 (source: NCBI BLink). & (gnl|cdd|36419 : 229.0) no description available & (gnl|cdd|81873 : 162.0) no description available & (reliability: 1002.0) & (original description: Putative HSD5, Description = 11-beta-hydroxysteroid dehydrogenase-like 5, PFAM = PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf17849_39489-45610' '(at3g59710 : 318.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: leaf lamina base, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G51030.1); Has 60289 Blast hits to 60264 proteins in 3086 species: Archae - 599; Bacteria - 42094; Metazoa - 4067; Fungi - 2569; Plants - 1993; Viruses - 0; Other Eukaryotes - 8967 (source: NCBI BLink). & (gnl|cdd|36422 : 177.0) no description available & (gnl|cdd|31231 : 118.0) no description available & (reliability: 636.0) & (original description: Putative Os02g0607700, Description = Os02g0607700 protein, PFAM = PF00106;PF00106)' T '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'niben101scf25893_13035-16757' '(q5kts5|grdh_dauca : 470.0) Glucose and ribitol dehydrogenase (EC 1.1.1.-) (Carrot ABA-induced in somatic embryos 5 protein) - Daucus carota (Carrot) & (at1g54870 : 469.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G05260.1); Has 123768 Blast hits to 123548 proteins in 3620 species: Archae - 996; Bacteria - 80755; Metazoa - 5748; Fungi - 6562; Plants - 2744; Viruses - 5; Other Eukaryotes - 26958 (source: NCBI BLink). & (gnl|cdd|76204 : 304.0) no description available & (gnl|cdd|35944 : 207.0) no description available & (reliability: 938.0) & (original description: Putative CAISE5, Description = Glucose and ribitol dehydrogenase, PFAM = PF13561)' T '26.23' 'misc.rhodanese' 'nbv0.3scaffold52635_6186-14230' '(at5g19370 : 271.0) rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein; FUNCTIONS IN: isomerase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Peptidyl-prolyl cis-trans isomerase, PpiC-type (InterPro:IPR000297); BEST Arabidopsis thaliana protein match is: co-factor for nitrate, reductase and xanthine dehydrogenase 5 (TAIR:AT5G55130.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29091 : 130.0) no description available & (reliability: 542.0) & (original description: Putative pin3, Description = Rhodanese-related sulfurtransferase, PFAM = PF13616;PF00581)' T '26.23' 'misc.rhodanese' 'nbv0.3scaffold61179_4529-8416' '(at3g08920 : 237.0) Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G42220.1); Has 237 Blast hits to 237 proteins in 53 species: Archae - 0; Bacteria - 52; Metazoa - 3; Fungi - 0; Plants - 146; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (reliability: 474.0) & (original description: Putative Sb01g038530, Description = Putative uncharacterized protein Sb01g038530, PFAM = PF00581)' T '26.23' 'misc.rhodanese' 'nbv0.5scaffold3939_44014-85855' '(at5g03455 : 117.0) Encodes a homolog of yeast cell cycle regulator CDC25. It has a sole catalytic domain and devoid of the N-terminal regulatory region found in the human CDC25 and is capable of reducing the mitotic cell length of transformed fission yeast. Non-plant CDC25 proteins have been shown to do this. However, the gene is more or less constant, regardless of whether the tissue examined contained proliferative cells. Also described as having arsenate reductase activity involved in arsenate resistance.; CDC25; FUNCTIONS IN: protein tyrosine phosphatase activity, arsenate reductase activity; INVOLVED IN: protein amino acid phosphorylation, response to arsenic; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative ACR2, Description = Arath, PFAM = PF00581)' T '26.23' 'misc.rhodanese' 'nbv0.5scaffold5709_20481-30979' '(at2g40760 : 542.0) Rhodanese/Cell cycle control phosphatase superfamily protein; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09280.1); Has 5729 Blast hits to 5726 proteins in 1464 species: Archae - 2; Bacteria - 2945; Metazoa - 57; Fungi - 3; Plants - 114; Viruses - 0; Other Eukaryotes - 2608 (source: NCBI BLink). & (gnl|cdd|31254 : 335.0) no description available & (reliability: 1084.0) & (original description: Putative glpE, Description = UPF0176 protein glpE, PFAM = PF00581)' T '26.23' 'misc.rhodanese' 'niben044scf00007177ctg025_1-4810' '(at2g42220 : 318.0) Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT3G08920.1); Has 955 Blast hits to 955 proteins in 207 species: Archae - 14; Bacteria - 343; Metazoa - 1; Fungi - 0; Plants - 204; Viruses - 0; Other Eukaryotes - 393 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative STR9, Description = Rhodanese-like domain-containing protein 9, chloroplastic, PFAM = PF00581)' T '26.23' 'misc.rhodanese' 'niben044scf00013051ctg001_27564-36052' '(at3g25480 : 220.0) Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: thylakoid rhodanese-like (TAIR:AT4G01050.1); Has 72 Blast hits to 72 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative STR4A, Description = Rhodanese-like domain-containing protein 4A, chloroplastic, PFAM = )' T '26.23' 'misc.rhodanese' 'niben044scf00042440ctg004_19328-23766' '(at3g08920 : 194.0) Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G42220.1); Has 237 Blast hits to 237 proteins in 53 species: Archae - 0; Bacteria - 52; Metazoa - 3; Fungi - 0; Plants - 146; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative STR10, Description = Rhodanese-like family protein-like protein, PFAM = )' T '26.23' 'misc.rhodanese' 'niben101scf01550_178366-182403' '(at4g27700 : 282.0) Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT3G08920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47756 : 81.4) no description available & (reliability: 564.0) & (original description: Putative F383_29003, Description = Thiosulfate sulfurtransferase, chloroplastic-like protein, PFAM = PF00581)' T '26.23' 'misc.rhodanese' 'niben101scf01696_75667-81157' '(at5g03455 : 205.0) Encodes a homolog of yeast cell cycle regulator CDC25. It has a sole catalytic domain and devoid of the N-terminal regulatory region found in the human CDC25 and is capable of reducing the mitotic cell length of transformed fission yeast. Non-plant CDC25 proteins have been shown to do this. However, the gene is more or less constant, regardless of whether the tissue examined contained proliferative cells. Also described as having arsenate reductase activity involved in arsenate resistance.; CDC25; FUNCTIONS IN: protein tyrosine phosphatase activity, arsenate reductase activity; INVOLVED IN: protein amino acid phosphorylation, response to arsenic; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29094 : 131.0) no description available & (reliability: 410.0) & (original description: Putative CDC25, Description = Dual specificity phosphatase Cdc25, PFAM = PF00581)' T '26.23' 'misc.rhodanese' 'niben101scf02093_463142-473430' '(at3g25480 : 218.0) Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: thylakoid rhodanese-like (TAIR:AT4G01050.1); Has 72 Blast hits to 72 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative STR4A, Description = Rhodanese-like domain-containing protein 4A, chloroplastic, PFAM = )' T '26.23' 'misc.rhodanese' 'niben101scf03494_1114702-1120003' '(at2g42220 : 323.0) Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT3G08920.1); Has 955 Blast hits to 955 proteins in 207 species: Archae - 14; Bacteria - 343; Metazoa - 1; Fungi - 0; Plants - 204; Viruses - 0; Other Eukaryotes - 393 (source: NCBI BLink). & (reliability: 646.0) & (original description: Putative STR9, Description = Rhodanese-like domain-containing protein 9, chloroplastic, PFAM = PF00581)' T '26.23' 'misc.rhodanese' 'niben101scf03739_644030-651079' '(at2g40760 : 539.0) Rhodanese/Cell cycle control phosphatase superfamily protein; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09280.1); Has 5729 Blast hits to 5726 proteins in 1464 species: Archae - 2; Bacteria - 2945; Metazoa - 57; Fungi - 3; Plants - 114; Viruses - 0; Other Eukaryotes - 2608 (source: NCBI BLink). & (gnl|cdd|31254 : 329.0) no description available & (reliability: 1078.0) & (original description: Putative glpE, Description = UPF0176 protein glpE, PFAM = PF00581)' T '26.23' 'misc.rhodanese' 'niben101scf04732_61208-74261' '(at5g19370 : 275.0) rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein; FUNCTIONS IN: isomerase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Peptidyl-prolyl cis-trans isomerase, PpiC-type (InterPro:IPR000297); BEST Arabidopsis thaliana protein match is: co-factor for nitrate, reductase and xanthine dehydrogenase 5 (TAIR:AT5G55130.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29091 : 130.0) no description available & (reliability: 550.0) & (original description: Putative pin3, Description = Rhodanese-related sulfurtransferase, PFAM = PF00581;PF13616)' T '26.23' 'misc.rhodanese' 'niben101scf05307_552466-556883' '(at3g08920 : 237.0) Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G42220.1); Has 237 Blast hits to 237 proteins in 53 species: Archae - 0; Bacteria - 52; Metazoa - 3; Fungi - 0; Plants - 146; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (reliability: 474.0) & (original description: Putative Sb01g038530, Description = Putative uncharacterized protein Sb01g038530, PFAM = PF00581)' T '26.23' 'misc.rhodanese' 'niben101scf13141_271925-278657' '(at4g27700 : 280.0) Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT3G08920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47756 : 83.7) no description available & (reliability: 560.0) & (original description: Putative At4g27700, Description = Rhodanese-like domain-containing protein 14, chloroplastic, PFAM = PF00581)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'nbv0.3scaffold1353_1-3783' '(at2g39020 : 163.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G39030.1); Has 2080 Blast hits to 2079 proteins in 734 species: Archae - 26; Bacteria - 1286; Metazoa - 282; Fungi - 96; Plants - 61; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (q9smb8|tht11_tobac : 155.0) Tyramine N-feruloyltransferase 4/11 (EC 2.3.1.110) (Hydroxycinnamoyl-CoA: tyramine N-hydroxycinnamoyltransferase) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|38426 : 125.0) no description available & (reliability: 326.0) & (original description: Putative PGSC0003DMG400037933, Description = Acyl-CoA N-acyltransferase (NAT) family protein, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'nbv0.3scaffold7879_312-11311' '(at2g22910 : 789.0) N-acetyl-l-glutamate synthase 1 (NAGS1); FUNCTIONS IN: acetyl-CoA:L-glutamate N-acetyltransferase activity, N-acetyltransferase activity; INVOLVED IN: cellular amino acid biosynthetic process, arginine biosynthetic process, metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Amino-acid N-acetyltransferase (ArgA) (InterPro:IPR010167); BEST Arabidopsis thaliana protein match is: N-acetyl-l-glutamate synthase 2 (TAIR:AT4G37670.2); Has 7959 Blast hits to 6500 proteins in 1789 species: Archae - 144; Bacteria - 6363; Metazoa - 2; Fungi - 138; Plants - 156; Viruses - 0; Other Eukaryotes - 1156 (source: NCBI BLink). & (gnl|cdd|37647 : 396.0) no description available & (gnl|cdd|58603 : 302.0) no description available & (reliability: 1578.0) & (original description: Putative NAGS1, Description = Probable amino-acid acetyltransferase NAGS1, chloroplastic, PFAM = PF00583;PF00696)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'nbv0.3scaffold8231_25097-29207' '(at2g23060 : 552.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, leaf whorl, flower, pedicel, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT4G37580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1104.0) & (original description: Putative At2g23060, Description = Probable N-acetyltransferase HLS1-like, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'nbv0.3scaffold8406_7106-11169' '(at2g06025 : 308.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT4G28030.1); Has 978 Blast hits to 978 proteins in 381 species: Archae - 51; Bacteria - 558; Metazoa - 90; Fungi - 41; Plants - 175; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 616.0) & (original description: Putative BnaC07g04350D, Description = BnaC07g04350D protein, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'nbv0.3scaffold12385_30808-35798' '(at1g18335 : 223.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37699 : 83.1) no description available & (reliability: 446.0) & (original description: Putative BnaC08g17900D, Description = BnaC08g17900D protein, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'nbv0.3scaffold25450_17895-20952' '(at5g16800 : 158.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: MEIOTIC CONTROL OF CROSSOVERS1 (TAIR:AT3G02980.1). & (reliability: 316.0) & (original description: Putative MCC1, Description = GCN5-like N-acetyltransferase, PFAM = )' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'nbv0.3scaffold29246_18842-23803' '(at1g72030 : 204.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 189 Blast hits to 187 proteins in 53 species: Archae - 0; Bacteria - 63; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative BnaA07g23290D, Description = BnaA07g23290D protein, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'nbv0.3scaffold42129_6899-18430' '(at2g04845 : 266.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 393 Blast hits to 383 proteins in 188 species: Archae - 0; Bacteria - 98; Metazoa - 122; Fungi - 80; Plants - 36; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|39338 : 174.0) no description available & (reliability: 532.0) & (original description: Putative nat9, Description = N-acetyltransferase 9-like protein, PFAM = PF13302)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'nbv0.3scaffold110676_326-2885' '(at2g32030 : 213.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G32020.1); Has 9856 Blast hits to 9837 proteins in 1766 species: Archae - 84; Bacteria - 9082; Metazoa - 1; Fungi - 109; Plants - 131; Viruses - 3; Other Eukaryotes - 446 (source: NCBI BLink). & (gnl|cdd|31856 : 98.1) no description available & (reliability: 426.0) & (original description: Putative speG, Description = Spermidine N(1)-acetyltransferase, PFAM = PF13302)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'nbv0.5scaffold688_632856-636352' '(at2g06025 : 199.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT4G28030.1); Has 978 Blast hits to 978 proteins in 381 species: Archae - 51; Bacteria - 558; Metazoa - 90; Fungi - 41; Plants - 175; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative pco109208b, Description = Acyl-CoA N-acyltransferases (NAT) superfamily protein, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'nbv0.5scaffold1448_163921-265488' '(at2g06025 : 227.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT4G28030.1); Has 978 Blast hits to 978 proteins in 381 species: Archae - 51; Bacteria - 558; Metazoa - 90; Fungi - 41; Plants - 175; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative BnaC07g04350D, Description = BnaC07g04350D protein, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'nbv0.5scaffold3060_365437-368280' '(at2g41450 : 204.0) N-acetyltransferases;N-acetyltransferases; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: intracellular; EXPRESSED IN: synergid; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: BRCT domain-containing DNA repair protein (TAIR:AT4G03130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative GNAT13, Description = N-acetyltransferase, PFAM = )' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'nbv0.5scaffold3787_181219-226841' '(at4g19985 : 160.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: N-terminal protein myristoylation, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: nuclear shuttle interacting (TAIR:AT1G32070.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative PGSC0003DMG400011658, Description = Putative acetyltransferase NSI, PFAM = )' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben044scf00001152ctg013_1013-7104' '(at4g28030 : 280.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G06025.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative BnaC06g05060D, Description = BnaC06g05060D protein, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben044scf00001385ctg009_11349-15147' '(at2g39020 : 157.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G39030.1); Has 2080 Blast hits to 2079 proteins in 734 species: Archae - 26; Bacteria - 1286; Metazoa - 282; Fungi - 96; Plants - 61; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (p80969|tht10_tobac : 145.0) Tyramine N-feruloyltransferase 10/30 (EC 2.3.1.110) (Hydroxycinnamoyl-CoA: tyramine N-hydroxycinnamoyltransferase) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|38426 : 130.0) no description available & (reliability: 314.0) & (original description: Putative PGSC0003DMG400037933, Description = Tyramine N-feruloyltransferase 4/11, putative, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben044scf00002903ctg001_816-5192' '(at5g11340 : 181.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT5G16800.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38348 : 115.0) no description available & (reliability: 362.0) & (original description: Putative NAA50, Description = N-alpha-acetyltransferase 50, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben044scf00011447ctg011_2905-5582' '(p80969|tht10_tobac : 420.0) Tyramine N-feruloyltransferase 10/30 (EC 2.3.1.110) (Hydroxycinnamoyl-CoA: tyramine N-hydroxycinnamoyltransferase) - Nicotiana tabacum (Common tobacco) & (at2g39030 : 157.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G39020.1); Has 1996 Blast hits to 1996 proteins in 707 species: Archae - 30; Bacteria - 1221; Metazoa - 280; Fungi - 96; Plants - 60; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (gnl|cdd|38426 : 93.0) no description available & (reliability: 314.0) & (original description: Putative THT4, Description = Tyramine N-feruloyltransferase 4/11, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben044scf00020779ctg000_5240-10374' '(at1g72030 : 195.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 189 Blast hits to 187 proteins in 53 species: Archae - 0; Bacteria - 63; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative BnaA07g23290D, Description = BnaA07g23290D protein, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben044scf00035409ctg007_1-8465' '(at2g22910 : 455.0) N-acetyl-l-glutamate synthase 1 (NAGS1); FUNCTIONS IN: acetyl-CoA:L-glutamate N-acetyltransferase activity, N-acetyltransferase activity; INVOLVED IN: cellular amino acid biosynthetic process, arginine biosynthetic process, metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Amino-acid N-acetyltransferase (ArgA) (InterPro:IPR010167); BEST Arabidopsis thaliana protein match is: N-acetyl-l-glutamate synthase 2 (TAIR:AT4G37670.2); Has 7959 Blast hits to 6500 proteins in 1789 species: Archae - 144; Bacteria - 6363; Metazoa - 2; Fungi - 138; Plants - 156; Viruses - 0; Other Eukaryotes - 1156 (source: NCBI BLink). & (gnl|cdd|58603 : 301.0) no description available & (gnl|cdd|37647 : 295.0) no description available & (reliability: 910.0) & (original description: Putative argA, Description = Amino-acid acetyltransferase, PFAM = PF00696)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf00494_739991-744188' '(at1g72030 : 194.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 189 Blast hits to 187 proteins in 53 species: Archae - 0; Bacteria - 63; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative 21, Description = Acetyltransferase+GNAT+family, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf00797_1749515-1764580' '(at2g06025 : 229.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT4G28030.1); Has 978 Blast hits to 978 proteins in 381 species: Archae - 51; Bacteria - 558; Metazoa - 90; Fungi - 41; Plants - 175; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative BnaC07g04350D, Description = BnaC07g04350D protein, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf00991_1014537-1018156' '(at2g23060 : 581.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, leaf whorl, flower, pedicel, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT4G37580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1162.0) & (original description: Putative At2g23060, Description = Probable N-acetyltransferase HLS1-like, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf01063_255438-260257' '(at5g16800 : 325.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: MEIOTIC CONTROL OF CROSSOVERS1 (TAIR:AT3G02980.1). & (gnl|cdd|38348 : 133.0) no description available & (reliability: 650.0) & (original description: Putative MCC1, Description = Histone acetyltransferase MCC1, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf01177_194159-198714' '(at2g38130 : 281.0) Encodes the Arabidopsis homolog of the yeast protein MAK3, a component of the N-terminal acetyltransferase complex C. In mutant plants, synthesis of plastome-encoded photosystem II core proteins D1 and CP47 is affected resulting in fewer thylakoid multiprotein complexes.; ATMAK3; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT5G13780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38349 : 197.0) no description available & (reliability: 562.0) & (original description: Putative MAK3, Description = N-alpha-acetyltransferase MAK3, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf01545_74706-83569' '(at5g11340 : 264.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT5G16800.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38348 : 156.0) no description available & (reliability: 528.0) & (original description: Putative Naa50, Description = N-alpha-acetyltransferase 50, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf01943_931910-945676' '(at2g04845 : 219.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 393 Blast hits to 383 proteins in 188 species: Archae - 0; Bacteria - 98; Metazoa - 122; Fungi - 80; Plants - 36; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|39338 : 151.0) no description available & (reliability: 438.0) & (original description: Putative RimL, Description = RimL/acetyltransferase-domain protein, PFAM = PF13302)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf02282_114748-118858' '(at4g37580 : 555.0) involved in apical hook development. putative N-acetyltransferase; HOOKLESS 1 (HLS1); CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G23060.1); Has 145 Blast hits to 145 proteins in 38 species: Archae - 22; Bacteria - 20; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 1110.0) & (original description: Putative At2g23060, Description = Probable N-acetyltransferase HLS1-like, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf02354_551922-555724' '(at2g39020 : 185.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G39030.1); Has 2080 Blast hits to 2079 proteins in 734 species: Archae - 26; Bacteria - 1286; Metazoa - 282; Fungi - 96; Plants - 61; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (q9smb8|tht11_tobac : 163.0) Tyramine N-feruloyltransferase 4/11 (EC 2.3.1.110) (Hydroxycinnamoyl-CoA: tyramine N-hydroxycinnamoyltransferase) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|38426 : 126.0) no description available & (reliability: 370.0) & (original description: Putative At2g39020, Description = Probable acetyltransferase NATA1-like, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf02354_745107-747835' '(at2g39030 : 193.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G39020.1); Has 1996 Blast hits to 1996 proteins in 707 species: Archae - 30; Bacteria - 1221; Metazoa - 280; Fungi - 96; Plants - 60; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (p80969|tht10_tobac : 153.0) Tyramine N-feruloyltransferase 10/30 (EC 2.3.1.110) (Hydroxycinnamoyl-CoA: tyramine N-hydroxycinnamoyltransferase) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|38426 : 118.0) no description available & (reliability: 386.0) & (original description: Putative NATA1, Description = L-ornithine N5-acetyltransferase NATA1, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf02510_568763-572758' '(at2g30330 : 136.0) Putative homolog of mammalian BLOC-1 Subunit 1. Protein - protein interaction with BLOS2 and also with SNX1.Located in endomembrane system and hypothesized to be involved in endomembrane transport.; GCN5L1 family protein; CONTAINS InterPro DOMAIN/s: GCN5-like 1 (InterPro:IPR009395); Has 190 Blast hits to 190 proteins in 87 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 8; Plants - 43; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|38600 : 110.0) no description available & (reliability: 272.0) & (original description: Putative Sb05g001020, Description = Putative uncharacterized protein Sb05g001020, PFAM = PF06320)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf02613_250156-257405' '(at5g11340 : 253.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT5G16800.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38348 : 145.0) no description available & (reliability: 506.0) & (original description: Putative san, Description = Probable N-acetyltransferase san, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf02669_200110-205783' '(at2g39000 : 350.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 700.0) & (original description: Putative At2g39000, Description = Acyl-CoA N-acyltransferases superfamily protein, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf03121_494742-499703' '(at1g72030 : 204.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 189 Blast hits to 187 proteins in 53 species: Archae - 0; Bacteria - 63; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative 21, Description = Acetyltransferase+GNAT+family, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf03446_464581-467258' '(p80969|tht10_tobac : 417.0) Tyramine N-feruloyltransferase 10/30 (EC 2.3.1.110) (Hydroxycinnamoyl-CoA: tyramine N-hydroxycinnamoyltransferase) - Nicotiana tabacum (Common tobacco) & (at2g39030 : 154.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G39020.1); Has 1996 Blast hits to 1996 proteins in 707 species: Archae - 30; Bacteria - 1221; Metazoa - 280; Fungi - 96; Plants - 60; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (gnl|cdd|38426 : 93.4) no description available & (reliability: 308.0) & (original description: Putative THT4, Description = Tyramine N-feruloyltransferase 4/11, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf03446_847916-861375' '(at2g39020 : 173.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G39030.1); Has 2080 Blast hits to 2079 proteins in 734 species: Archae - 26; Bacteria - 1286; Metazoa - 282; Fungi - 96; Plants - 61; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (q9smb8|tht11_tobac : 149.0) Tyramine N-feruloyltransferase 4/11 (EC 2.3.1.110) (Hydroxycinnamoyl-CoA: tyramine N-hydroxycinnamoyltransferase) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|38426 : 119.0) no description available & (reliability: 346.0) & (original description: Putative glysoja_047558, Description = Tyramine N-feruloyltransferase 4/11, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf03712_77051-79755' '(at2g39020 : 308.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G39030.1); Has 2080 Blast hits to 2079 proteins in 734 species: Archae - 26; Bacteria - 1286; Metazoa - 282; Fungi - 96; Plants - 61; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (gnl|cdd|38426 : 195.0) no description available & (q9smb8|tht11_tobac : 162.0) Tyramine N-feruloyltransferase 4/11 (EC 2.3.1.110) (Hydroxycinnamoyl-CoA: tyramine N-hydroxycinnamoyltransferase) - Nicotiana tabacum (Common tobacco) & (reliability: 616.0) & (original description: Putative At2g39020, Description = Probable acetyltransferase NATA1-like, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf03747_530038-545570' '(at2g22910 : 776.0) N-acetyl-l-glutamate synthase 1 (NAGS1); FUNCTIONS IN: acetyl-CoA:L-glutamate N-acetyltransferase activity, N-acetyltransferase activity; INVOLVED IN: cellular amino acid biosynthetic process, arginine biosynthetic process, metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Amino-acid N-acetyltransferase (ArgA) (InterPro:IPR010167); BEST Arabidopsis thaliana protein match is: N-acetyl-l-glutamate synthase 2 (TAIR:AT4G37670.2); Has 7959 Blast hits to 6500 proteins in 1789 species: Archae - 144; Bacteria - 6363; Metazoa - 2; Fungi - 138; Plants - 156; Viruses - 0; Other Eukaryotes - 1156 (source: NCBI BLink). & (gnl|cdd|37647 : 396.0) no description available & (gnl|cdd|58603 : 300.0) no description available & (reliability: 1552.0) & (original description: Putative NAGS2, Description = Probable amino-acid acetyltransferase NAGS2, chloroplastic, PFAM = PF00583;PF00696)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf03952_341040-344899' '(at2g39020 : 171.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G39030.1); Has 2080 Blast hits to 2079 proteins in 734 species: Archae - 26; Bacteria - 1286; Metazoa - 282; Fungi - 96; Plants - 61; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (p80969|tht10_tobac : 162.0) Tyramine N-feruloyltransferase 10/30 (EC 2.3.1.110) (Hydroxycinnamoyl-CoA: tyramine N-hydroxycinnamoyltransferase) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|38426 : 121.0) no description available & (reliability: 342.0) & (original description: Putative RCOM_0263630, Description = Tyramine N-feruloyltransferase 4/11, putative, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf03986_159218-165370' '(at5g16800 : 290.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: MEIOTIC CONTROL OF CROSSOVERS1 (TAIR:AT3G02980.1). & (gnl|cdd|38348 : 130.0) no description available & (reliability: 580.0) & (original description: Putative MCC1, Description = Histone acetyltransferase MCC1, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf04177_70799-73527' '(p80969|tht10_tobac : 325.0) Tyramine N-feruloyltransferase 10/30 (EC 2.3.1.110) (Hydroxycinnamoyl-CoA: tyramine N-hydroxycinnamoyltransferase) - Nicotiana tabacum (Common tobacco) & (at2g39030 : 155.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G39020.1); Has 1996 Blast hits to 1996 proteins in 707 species: Archae - 30; Bacteria - 1221; Metazoa - 280; Fungi - 96; Plants - 60; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (gnl|cdd|38426 : 91.9) no description available & (reliability: 310.0) & (original description: Putative THT4, Description = Tyramine N-feruloyltransferase 4/11, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf04329_11968-14435' '(at5g15770 : 202.0) Encodes a putative glucose-6-phosphate acetyltransferase involved in UDP-N-acetylglucosamine biosynthesis.; glucose-6-phosphate acetyltransferase 1 (GNA1); FUNCTIONS IN: glucosamine 6-phosphate N-acetyltransferase activity, N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 806 Blast hits to 799 proteins in 307 species: Archae - 17; Bacteria - 208; Metazoa - 186; Fungi - 170; Plants - 47; Viruses - 3; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|38606 : 187.0) no description available & (reliability: 404.0) & (original description: Putative GNA1, Description = Glucosamine 6-phosphate N-acetyltransferase, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf04396_465124-467718' '(at3g22560 : 191.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G32020.1); Has 8133 Blast hits to 8121 proteins in 1623 species: Archae - 77; Bacteria - 7549; Metazoa - 0; Fungi - 78; Plants - 124; Viruses - 1; Other Eukaryotes - 304 (source: NCBI BLink). & (gnl|cdd|31856 : 92.3) no description available & (reliability: 382.0) & (original description: Putative BnaC03g34040D, Description = BnaA03g28880D protein, PFAM = PF13302)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf04607_431230-443313' '(at2g22910 : 781.0) N-acetyl-l-glutamate synthase 1 (NAGS1); FUNCTIONS IN: acetyl-CoA:L-glutamate N-acetyltransferase activity, N-acetyltransferase activity; INVOLVED IN: cellular amino acid biosynthetic process, arginine biosynthetic process, metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Amino-acid N-acetyltransferase (ArgA) (InterPro:IPR010167); BEST Arabidopsis thaliana protein match is: N-acetyl-l-glutamate synthase 2 (TAIR:AT4G37670.2); Has 7959 Blast hits to 6500 proteins in 1789 species: Archae - 144; Bacteria - 6363; Metazoa - 2; Fungi - 138; Plants - 156; Viruses - 0; Other Eukaryotes - 1156 (source: NCBI BLink). & (gnl|cdd|37647 : 402.0) no description available & (gnl|cdd|58603 : 303.0) no description available & (reliability: 1562.0) & (original description: Putative NAGS1, Description = Probable amino-acid acetyltransferase NAGS1, chloroplastic, PFAM = PF00583;PF00696)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf05084_18423-24061' '(at1g18335 : 238.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37699 : 86.2) no description available & (reliability: 476.0) & (original description: Putative BnaC08g17900D, Description = BnaC08g17900D protein, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf06650_307047-312257' '(at2g32030 : 191.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G32020.1); Has 9856 Blast hits to 9837 proteins in 1766 species: Archae - 84; Bacteria - 9082; Metazoa - 1; Fungi - 109; Plants - 131; Viruses - 3; Other Eukaryotes - 446 (source: NCBI BLink). & (gnl|cdd|31856 : 95.0) no description available & (reliability: 382.0) & (original description: Putative GNAT27, Description = GNAT transcription factor, PFAM = PF13302)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf06650_370530-373135' '(at2g32030 : 211.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G32020.1); Has 9856 Blast hits to 9837 proteins in 1766 species: Archae - 84; Bacteria - 9082; Metazoa - 1; Fungi - 109; Plants - 131; Viruses - 3; Other Eukaryotes - 446 (source: NCBI BLink). & (gnl|cdd|31856 : 97.7) no description available & (reliability: 422.0) & (original description: Putative GNAT27, Description = GNAT transcription factor, PFAM = PF13302)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf06976_685454-689542' '(at4g37580 : 375.0) involved in apical hook development. putative N-acetyltransferase; HOOKLESS 1 (HLS1); CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G23060.1); Has 145 Blast hits to 145 proteins in 38 species: Archae - 22; Bacteria - 20; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 746.0) & (original description: Putative HLS1, Description = Probable N-acetyltransferase HLS1, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf07165_258562-263929' '(at1g18335 : 205.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37699 : 82.4) no description available & (reliability: 410.0) & (original description: Putative BnaC08g17900D, Description = BnaC08g17900D protein, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf08179_77857-83705' '(at4g19985 : 179.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: N-terminal protein myristoylation, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: nuclear shuttle interacting (TAIR:AT1G32070.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative PGSC0003DMG400011658, Description = Putative acetyltransferase NSI, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf08581_84557-94375' '(at4g28030 : 280.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G06025.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative BnaC06g05060D, Description = BnaC06g05060D protein, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf08758_218895-222233' '(at2g30090 : 363.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, sepal, male gametophyte; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT4G37580.1); Has 320 Blast hits to 320 proteins in 91 species: Archae - 28; Bacteria - 42; Metazoa - 134; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 726.0) & (original description: Putative BnaC04g14700D, Description = BnaC04g14700D protein, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf08926_795337-807024' '(at1g32070 : 289.0) Encodes a nuclear acetyltransferase (NSI)that interacts with the geminivirus movement protein NSP. This interaction is required for viral infection and systemic spread. Acetylates the viral coat protein (CP) in vitro, but not NSP. NSP inhibits NSI activity in vitro. NSI is highly transcribed in phloem and in xylem parenchyma cells, and in the apical meristem and guard cells, within young tissues in Arabidopsis, and its expression is turned off as tissues mature.; nuclear shuttle interacting (NSI); FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: pathogenesis, metabolic process, spread of virus in host; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT1G26220.1); Has 2159 Blast hits to 2159 proteins in 620 species: Archae - 23; Bacteria - 1709; Metazoa - 2; Fungi - 19; Plants - 107; Viruses - 0; Other Eukaryotes - 299 (source: NCBI BLink). & (reliability: 578.0) & (original description: Putative ycf52, Description = Ycf52 protein, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf09234_2875-5423' '(at3g22560 : 131.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G32020.1); Has 8133 Blast hits to 8121 proteins in 1623 species: Archae - 77; Bacteria - 7549; Metazoa - 0; Fungi - 78; Plants - 124; Viruses - 1; Other Eukaryotes - 304 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative PGSC0003DMG400038970, Description = Acetyltransferase (GNAT) domain protein, PFAM = PF13302)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf09234_7726-10244' '(at3g22560 : 148.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G32020.1); Has 8133 Blast hits to 8121 proteins in 1623 species: Archae - 77; Bacteria - 7549; Metazoa - 0; Fungi - 78; Plants - 124; Viruses - 1; Other Eukaryotes - 304 (source: NCBI BLink). & (gnl|cdd|31856 : 91.2) no description available & (reliability: 296.0) & (original description: Putative BnaC03g34040D, Description = BnaA03g28880D protein, PFAM = PF13302)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf09906_215321-222642' '(at1g32070 : 293.0) Encodes a nuclear acetyltransferase (NSI)that interacts with the geminivirus movement protein NSP. This interaction is required for viral infection and systemic spread. Acetylates the viral coat protein (CP) in vitro, but not NSP. NSP inhibits NSI activity in vitro. NSI is highly transcribed in phloem and in xylem parenchyma cells, and in the apical meristem and guard cells, within young tissues in Arabidopsis, and its expression is turned off as tissues mature.; nuclear shuttle interacting (NSI); FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: pathogenesis, metabolic process, spread of virus in host; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT1G26220.1); Has 2159 Blast hits to 2159 proteins in 620 species: Archae - 23; Bacteria - 1709; Metazoa - 2; Fungi - 19; Plants - 107; Viruses - 0; Other Eukaryotes - 299 (source: NCBI BLink). & (reliability: 586.0) & (original description: Putative NSI, Description = Acetyltransferase NSI, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf10002_66236-70817' '(at1g24040 : 276.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 119 Blast hits to 119 proteins in 41 species: Archae - 9; Bacteria - 28; Metazoa - 4; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 552.0) & (original description: Putative BnaA09g29830D, Description = BnaA09g29830D protein, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf10613_1-2375' '(at1g26220 : 258.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: nuclear shuttle interacting (TAIR:AT1G32070.3); Has 1297 Blast hits to 1297 proteins in 410 species: Archae - 14; Bacteria - 927; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 263 (source: NCBI BLink). & (reliability: 516.0) & (original description: Putative ycf52, Description = Putative N-acetyltransferase ycf52, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf11305_122592-144478' '(at2g41450 : 513.0) N-acetyltransferases;N-acetyltransferases; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: intracellular; EXPRESSED IN: synergid; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: BRCT domain-containing DNA repair protein (TAIR:AT4G03130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37254 : 156.0) no description available & (reliability: 1026.0) & (original description: Putative GNAT13, Description = GNAT transcription factor, PFAM = PF16770)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf20727_1-3401' '(at2g23060 : 575.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, leaf whorl, flower, pedicel, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT4G37580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1150.0) & (original description: Putative At2g23060, Description = Probable N-acetyltransferase HLS1-like, PFAM = PF00583)' T '26.24' 'misc.GCN5-related N-acetyltransferase' 'niben101scf38970_1-6673' '(at4g19985 : 191.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: N-terminal protein myristoylation, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: nuclear shuttle interacting (TAIR:AT1G32070.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative At4g19985, Description = GCN5-related N-acetyltransferase (GNAT) family protein, PFAM = PF00583)' T '26.25' 'misc.sulfotransferase' 'nbv0.3scaffold20471_307-3498' '(gnl|cdd|36797 : 274.0) no description available & (at1g74100 : 266.0) encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with different desulfoglucosinolates, the best substrate is indole-3-methyl-dsGS, followed by benzyl-dsGS. Expression was induced by wounding, jasmonate and ethylene stimulates.; sulfotransferase 16 (SOT16); FUNCTIONS IN: sulfotransferase activity, desulfoglucosinolate sulfotransferase activity; INVOLVED IN: glucosinolate biosynthetic process, response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 17 (TAIR:AT1G18590.1); Has 2855 Blast hits to 2817 proteins in 179 species: Archae - 0; Bacteria - 199; Metazoa - 1686; Fungi - 0; Plants - 534; Viruses - 0; Other Eukaryotes - 436 (source: NCBI BLink). & (gnl|cdd|84950 : 185.0) no description available & (reliability: 532.0) & (original description: Putative SOT6, Description = Cytosolic sulfotransferase 6, PFAM = PF00685)' T '26.25' 'misc.sulfotransferase' 'niben101scf00783_628131-632501' '(gnl|cdd|36797 : 268.0) no description available & (at3g45070 : 223.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: sulfotransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G45080.1); Has 2794 Blast hits to 2750 proteins in 189 species: Archae - 0; Bacteria - 202; Metazoa - 1707; Fungi - 1; Plants - 542; Viruses - 0; Other Eukaryotes - 342 (source: NCBI BLink). & (gnl|cdd|84950 : 197.0) no description available & (reliability: 438.0) & (original description: Putative ST1, Description = Sulfotransferase, PFAM = PF00685)' T '26.25' 'misc.sulfotransferase' 'niben101scf03045_342816-345751' '(gnl|cdd|36797 : 258.0) no description available & (at5g07010 : 210.0) Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).; sulfotransferase 2A (ST2A); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 2B (TAIR:AT5G07000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84950 : 190.0) no description available & (reliability: 414.0) & (original description: Putative PGSC0003DMG400039363, Description = Sulfotransferase, PFAM = PF00685)' T '26.25' 'misc.sulfotransferase' 'niben101scf04231_297861-300898' '(gnl|cdd|36797 : 284.0) no description available & (at5g07010 : 266.0) Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).; sulfotransferase 2A (ST2A); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 2B (TAIR:AT5G07000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84950 : 209.0) no description available & (reliability: 530.0) & (original description: Putative SOT5, Description = Sulfotransferase, PFAM = PF00685)' T '26.25' 'misc.sulfotransferase' 'niben101scf04231_335748-343576' '(gnl|cdd|36797 : 285.0) no description available & (at1g18590 : 280.0) encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with preference with methionine-derived desulfoglucosinolates.; sulfotransferase 17 (SOT17); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: desulfo-glucosinolate sulfotransferase 18 (TAIR:AT1G74090.1); Has 2933 Blast hits to 2889 proteins in 198 species: Archae - 0; Bacteria - 241; Metazoa - 1692; Fungi - 1; Plants - 541; Viruses - 0; Other Eukaryotes - 458 (source: NCBI BLink). & (gnl|cdd|84950 : 209.0) no description available & (reliability: 560.0) & (original description: Putative SOT17, Description = Cytosolic sulfotransferase 17, PFAM = PF00685)' T '26.26' 'misc.aminotransferases' '' '' '26.26.1' 'misc.aminotransferases.aminotransferase class IV family protein' 'nbv0.3scaffold7144_12115-29862' '(at5g27410 : 840.0) D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT3G05190.1). & (gnl|cdd|29569 : 309.0) no description available & (gnl|cdd|36193 : 187.0) no description available & (reliability: 1680.0) & (original description: Putative aat, Description = Aminotransferase class IV, PFAM = PF01063)' T '26.26.1' 'misc.aminotransferases.aminotransferase class IV family protein' 'nbv0.3scaffold33864_911-15692' '(at5g27400 : 293.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT5G27410.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 564.0) & (original description: Putative At5g27400, Description = At5g27400, PFAM = PF10294)' T '26.26.1' 'misc.aminotransferases.aminotransferase class IV family protein' 'nbv0.5scaffold674_545011-551323' '(at5g57850 : 450.0) D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: 4-amino-4-deoxychorismate lyase activity, catalytic activity; INVOLVED IN: tetrahydrofolate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT3G05190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 217.0) no description available & (gnl|cdd|29570 : 187.0) no description available & (reliability: 900.0) & (original description: Putative DAAT, Description = D-amino-acid transaminase, chloroplastic, PFAM = PF01063)' T '26.26.1' 'misc.aminotransferases.aminotransferase class IV family protein' 'nbv0.5scaffold1122_701346-708818' '(at5g27410 : 216.0) D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT3G05190.1). & (reliability: 432.0) & (original description: Putative TCM_026602, Description = S-adenosyl-L-methionine-dependent methyltransferases superfamily protein, putative isoform 2, PFAM = PF10294)' T '26.26.1' 'misc.aminotransferases.aminotransferase class IV family protein' 'niben101scf00963_55385-94891' '(at5g27410 : 847.0) D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT3G05190.1). & (gnl|cdd|29569 : 312.0) no description available & (gnl|cdd|36193 : 187.0) no description available & (reliability: 1694.0) & (original description: Putative aat, Description = Aminotransferase class IV, PFAM = PF01063)' T '26.26.1' 'misc.aminotransferases.aminotransferase class IV family protein' 'niben101scf04745_426824-432243' '(at5g57850 : 374.0) D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: 4-amino-4-deoxychorismate lyase activity, catalytic activity; INVOLVED IN: tetrahydrofolate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT3G05190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29570 : 210.0) no description available & (gnl|cdd|36193 : 170.0) no description available & (reliability: 748.0) & (original description: Putative DAAT, Description = D-amino-acid transaminase, chloroplastic, PFAM = PF01063)' T '26.26.1' 'misc.aminotransferases.aminotransferase class IV family protein' 'niben101scf08776_330243-336555' '(at5g57850 : 356.0) D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: 4-amino-4-deoxychorismate lyase activity, catalytic activity; INVOLVED IN: tetrahydrofolate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT3G05190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36193 : 165.0) no description available & (gnl|cdd|29570 : 145.0) no description available & (reliability: 712.0) & (original description: Putative Sb04g010240, Description = Putative uncharacterized protein Sb04g010240, PFAM = PF01063)' T '26.27' 'misc.calcineurin-like phosphoesterase family protein' 'nbv0.3scaffold14219_18780-28106' '(at1g53710 : 580.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); Has 733 Blast hits to 717 proteins in 171 species: Archae - 5; Bacteria - 24; Metazoa - 239; Fungi - 230; Plants - 210; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|38866 : 205.0) no description available & (reliability: 1160.0) & (original description: Putative At1g53710, Description = Calcineurin-like metallo-phosphoesterase superfamily protein, PFAM = PF00149)' T '26.27' 'misc.calcineurin-like phosphoesterase family protein' 'nbv0.3scaffold52652_1915-7147' '(at1g07010 : 552.0) Calcineurin-like metallo-phosphoesterase superfamily protein; BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT1G18480.1); Has 109 Blast hits to 109 proteins in 48 species: Archae - 0; Bacteria - 77; Metazoa - 0; Fungi - 8; Plants - 20; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|35595 : 91.9) no description available & (reliability: 1104.0) & (original description: Putative SLP1, Description = Shewanella-like protein phosphatase 1, PFAM = PF00149)' T '26.27' 'misc.calcineurin-like phosphoesterase family protein' 'niben101scf00219_227689-243841' '(at4g11800 : 1529.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT4G23000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 3000.0) & (original description: Putative BnaC09g23760D, Description = BnaC09g23760D protein, PFAM = PF00149)' T '26.27' 'misc.calcineurin-like phosphoesterase family protein' 'niben101scf01411_19881-29924' '(at3g47810 : 350.0) Homolog of yeast retromer subunit VPS29. Part of a retromer-like protein complex involved in endosome to lysosome protein transport.; MAIGO 1 (MAG1); FUNCTIONS IN: hydrolase activity, acting on ester bonds, protein serine/threonine phosphatase activity; INVOLVED IN: endosome to lysosome transport, protein targeting to vacuole; LOCATED IN: microsome, retromer complex, membrane, multivesicular body; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphodiesterase MJ0936 (InterPro:IPR000979); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38535 : 308.0) no description available & (gnl|cdd|30967 : 104.0) no description available & (reliability: 700.0) & (original description: Putative VPS29, Description = Vacuolar protein sorting-associated protein 29, PFAM = PF12850)' T '26.27' 'misc.calcineurin-like phosphoesterase family protein' 'niben101scf01681_163935-167122' '(at1g18480 : 491.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT1G07010.1); Has 638 Blast hits to 634 proteins in 194 species: Archae - 15; Bacteria - 274; Metazoa - 0; Fungi - 21; Plants - 102; Viruses - 3; Other Eukaryotes - 223 (source: NCBI BLink). & (reliability: 982.0) & (original description: Putative SLP2, Description = Shewanella-like protein phosphatase 2, PFAM = PF00149)' T '26.27' 'misc.calcineurin-like phosphoesterase family protein' 'niben101scf01887_865363-879825' '(at4g23000 : 1548.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT4G11800.1); Has 177 Blast hits to 132 proteins in 49 species: Archae - 0; Bacteria - 98; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 3096.0) & (original description: Putative BnaC09g23760D, Description = BnaC09g23760D protein, PFAM = PF00149)' T '26.27' 'misc.calcineurin-like phosphoesterase family protein' 'niben101scf03194_20265-23467' '(at3g47810 : 265.0) Homolog of yeast retromer subunit VPS29. Part of a retromer-like protein complex involved in endosome to lysosome protein transport.; MAIGO 1 (MAG1); FUNCTIONS IN: hydrolase activity, acting on ester bonds, protein serine/threonine phosphatase activity; INVOLVED IN: endosome to lysosome transport, protein targeting to vacuole; LOCATED IN: microsome, retromer complex, membrane, multivesicular body; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphodiesterase MJ0936 (InterPro:IPR000979); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38535 : 227.0) no description available & (gnl|cdd|30967 : 88.5) no description available & (reliability: 530.0) & (original description: Putative vps29, Description = Vacuolar protein sorting-associated protein 29, PFAM = PF12850)' T '26.27' 'misc.calcineurin-like phosphoesterase family protein' 'niben101scf06942_287071-291521' '(at1g07010 : 554.0) Calcineurin-like metallo-phosphoesterase superfamily protein; BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT1G18480.1); Has 109 Blast hits to 109 proteins in 48 species: Archae - 0; Bacteria - 77; Metazoa - 0; Fungi - 8; Plants - 20; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|35595 : 94.6) no description available & (reliability: 1108.0) & (original description: Putative SLP1, Description = Shewanella-like protein phosphatase 1, PFAM = PF00149)' T '26.27' 'misc.calcineurin-like phosphoesterase family protein' 'niben101scf08947_261680-269798' '(at3g03305 : 727.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); Has 171 Blast hits to 169 proteins in 60 species: Archae - 0; Bacteria - 6; Metazoa - 62; Fungi - 10; Plants - 59; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|35920 : 139.0) no description available & (reliability: 1454.0) & (original description: Putative At3g03305, Description = Putative metallophosphoesterase At3g03305, PFAM = PF00149)' T '26.27' 'misc.calcineurin-like phosphoesterase family protein' 'niben101scf09101_19272-26189' '(at1g07010 : 303.0) Calcineurin-like metallo-phosphoesterase superfamily protein; BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT1G18480.1); Has 109 Blast hits to 109 proteins in 48 species: Archae - 0; Bacteria - 77; Metazoa - 0; Fungi - 8; Plants - 20; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 606.0) & (original description: Putative CPL3, Description = Calcineurin-like phosphoesterase family protein, PFAM = )' T '26.27' 'misc.calcineurin-like phosphoesterase family protein' 'niben101scf12690_124721-136740' '(at1g53710 : 542.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); Has 733 Blast hits to 717 proteins in 171 species: Archae - 5; Bacteria - 24; Metazoa - 239; Fungi - 230; Plants - 210; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|38866 : 205.0) no description available & (reliability: 1084.0) & (original description: Putative At1g53710, Description = Calcineurin-like metallo-phosphoesterase superfamily protein, PFAM = PF00149)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold6398_24173-28487' '(at5g14450 : 349.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G26430.1); Has 3217 Blast hits to 3179 proteins in 111 species: Archae - 0; Bacteria - 82; Metazoa - 0; Fungi - 14; Plants - 3119; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (q7y1x1|est_hevbr : 296.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|58514 : 286.0) no description available & (reliability: 698.0) & (original description: Putative ache, Description = Acetylcholinesterase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold6618_8190-21065' '(at1g28580 : 350.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G28570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 314.0) no description available & (q7y1x1|est_hevbr : 175.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 700.0) & (original description: Putative At1g28570, Description = GDSL esterase/lipase At1g28570, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold6618_10469-21098' '(at1g28580 : 350.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G28570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 313.0) no description available & (q7y1x1|est_hevbr : 175.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 700.0) & (original description: Putative BnaA07g08280D, Description = BnaA07g08280D protein, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold14764_747-5515' '(at5g33370 : 530.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: Li-tolerant lipase 1 (TAIR:AT3G04290.1); Has 2955 Blast hits to 2928 proteins in 93 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 2884; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|58514 : 326.0) no description available & (p40603|apg_brana : 155.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1060.0) & (original description: Putative Sb04g037130, Description = Putative uncharacterized protein Sb04g037130, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold14771_9122-13080' '(at5g03980 : 275.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 265.0) no description available & (q7y1x1|est_hevbr : 147.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 550.0) & (original description: Putative cgt, Description = GDSL lipase-like chlorogenate-dependent caffeoyltransferase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold15446_21449-34291' '(gnl|cdd|58514 : 250.0) no description available & (at1g71691 : 208.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G33811.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 416.0) & (original description: Putative At1g33811, Description = GDSL esterase/lipase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold27290_1027-16166' '(gnl|cdd|58514 : 334.0) no description available & (at5g55050 : 273.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G50400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40603|apg_brana : 150.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 546.0) & (original description: Putative CPRD47, Description = GDSL esterase/lipase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold32663_11374-18193' '(at1g75900 : 404.0) GDSL-like Lipase/Acylhydrolase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G75880.2); Has 3444 Blast hits to 3405 proteins in 204 species: Archae - 0; Bacteria - 282; Metazoa - 0; Fungi - 26; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|58514 : 387.0) no description available & (p40603|apg_brana : 258.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 734.0) & (original description: Putative EXL3, Description = GDSL esterase/lipase EXL3, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold37089_2659-20891' '(at1g29670 : 337.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, cell wall, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29660.1); Has 3712 Blast hits to 3673 proteins in 308 species: Archae - 0; Bacteria - 502; Metazoa - 0; Fungi - 62; Plants - 3128; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 299.0) no description available & (p40603|apg_brana : 143.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 674.0) & (original description: Putative LIP1, Description = GDSL esterase/lipase, PFAM = PF00657;PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold39123_2892-13835' '(gnl|cdd|58514 : 289.0) no description available & (at1g71250 : 225.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G08460.1); Has 3499 Blast hits to 3462 proteins in 237 species: Archae - 0; Bacteria - 354; Metazoa - 0; Fungi - 36; Plants - 3096; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p40603|apg_brana : 142.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 450.0) & (original description: Putative Os06g0560700, Description = Os06g0560700 protein, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold40426_12705-17424' '(at1g09390 : 349.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G56670.1); Has 3339 Blast hits to 3301 proteins in 169 species: Archae - 0; Bacteria - 205; Metazoa - 0; Fungi - 26; Plants - 3101; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|58514 : 254.0) no description available & (q7y1x1|est_hevbr : 229.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 698.0) & (original description: Putative At1g09390, Description = GDSL esterase/lipase At1g09390, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold40426_13291-17421' '(at1g09390 : 341.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G56670.1); Has 3339 Blast hits to 3301 proteins in 169 species: Archae - 0; Bacteria - 205; Metazoa - 0; Fungi - 26; Plants - 3101; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|58514 : 249.0) no description available & (q7y1x1|est_hevbr : 224.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 682.0) & (original description: Putative Sb03g013400, Description = Putative uncharacterized protein Sb03g013400, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold43873_1-7523' '(at5g62930 : 373.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Esterase, SGNH hydrolase-type, subgroup (InterPro:IPR013831), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT5G45920.1); Has 689 Blast hits to 688 proteins in 254 species: Archae - 0; Bacteria - 229; Metazoa - 77; Fungi - 158; Plants - 171; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|38245 : 309.0) no description available & (gnl|cdd|58515 : 265.0) no description available & (reliability: 746.0) & (original description: Putative At5g62930, Description = GDSL esterase/lipase At5g62930, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold44772_196-17066' '(at2g24560 : 182.0) GDSL-like Lipase/Acylhydrolase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT1G58430.1); Has 3332 Blast hits to 3298 proteins in 183 species: Archae - 0; Bacteria - 266; Metazoa - 0; Fungi - 6; Plants - 3039; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|58514 : 171.0) no description available & (p40603|apg_brana : 117.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 364.0) & (original description: Putative EXL1, Description = GDSL-like lipase/acylhydrolase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold50584_5708-14962' '(gnl|cdd|58514 : 172.0) no description available & (at1g75880 : 147.0) SGNH hydrolase-type esterase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G75890.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p40603|apg_brana : 117.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 268.0) & (original description: Putative EXL1, Description = GDSL esterase/lipase EXL3, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold62714_2320-6838' '(at1g29670 : 318.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, cell wall, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29660.1); Has 3712 Blast hits to 3673 proteins in 308 species: Archae - 0; Bacteria - 502; Metazoa - 0; Fungi - 62; Plants - 3128; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 281.0) no description available & (p40603|apg_brana : 102.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 636.0) & (original description: Putative At1g29670, Description = GDSL esterase/lipase At1g29670, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold81152_1178-6933' '(at3g11210 : 406.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Esterase, SGNH hydrolase-type, subgroup (InterPro:IPR013831), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT2G38180.1); Has 768 Blast hits to 767 proteins in 294 species: Archae - 0; Bacteria - 304; Metazoa - 76; Fungi - 152; Plants - 166; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|38245 : 313.0) no description available & (gnl|cdd|58515 : 242.0) no description available & (reliability: 812.0) & (original description: Putative CPRD49, Description = GDSL esterase/lipase CPRD49, PFAM = PF13472)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.3scaffold81300_1560-6909' '(at5g03820 : 476.0) GDSL-like Lipase/Acylhydrolase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT5G03810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 338.0) no description available & (p40603|apg_brana : 206.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 952.0) & (original description: Putative At5g03810, Description = GDSL esterase/lipase At5g03810, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold136_980962-991761' '(gnl|cdd|58514 : 293.0) no description available & (at1g29670 : 238.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, cell wall, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29660.1); Has 3712 Blast hits to 3673 proteins in 308 species: Archae - 0; Bacteria - 502; Metazoa - 0; Fungi - 62; Plants - 3128; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (p40603|apg_brana : 150.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 476.0) & (original description: Putative Os06g0560700, Description = Os06g0560700 protein, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold201_859098-1084865' '(gnl|cdd|58514 : 294.0) no description available & (at1g29660 : 281.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29670.1); Has 3857 Blast hits to 3814 proteins in 365 species: Archae - 0; Bacteria - 608; Metazoa - 0; Fungi - 87; Plants - 3137; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (p40603|apg_brana : 85.9) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 562.0) & (original description: Putative LIP1, Description = GDSL esterase/lipase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold356_554264-563243' '(at5g03610 : 351.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G09930.1); Has 3390 Blast hits to 3360 proteins in 226 species: Archae - 0; Bacteria - 388; Metazoa - 0; Fungi - 3; Plants - 2981; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|58514 : 243.0) no description available & (p40603|apg_brana : 107.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 702.0) & (original description: Putative At5g03610, Description = GDSL esterase/lipase At5g03610, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold843_579868-586273' '(at5g45910 : 349.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28650.1); Has 3231 Blast hits to 3179 proteins in 126 species: Archae - 0; Bacteria - 121; Metazoa - 0; Fungi - 0; Plants - 3108; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|58514 : 312.0) no description available & (q7y1x1|est_hevbr : 143.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 698.0) & (original description: Putative At5g45910, Description = GDSL esterase/lipase At5g45910, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold899_1026-24597' '(at5g03610 : 237.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G09930.1); Has 3390 Blast hits to 3360 proteins in 226 species: Archae - 0; Bacteria - 388; Metazoa - 0; Fungi - 3; Plants - 2981; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|58514 : 128.0) no description available & (reliability: 474.0) & (original description: Putative GDSL, Description = GDSL esterase/lipase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold1004_503063-512113' '(at1g75900 : 406.0) GDSL-like Lipase/Acylhydrolase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G75880.2); Has 3444 Blast hits to 3405 proteins in 204 species: Archae - 0; Bacteria - 282; Metazoa - 0; Fungi - 26; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|58514 : 383.0) no description available & (p40603|apg_brana : 267.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 748.0) & (original description: Putative EXL3, Description = GDSL esterase/lipase EXL3, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold1463_152915-448225' '(q7y1x1|est_hevbr : 88.2) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (at5g14450 : 87.8) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G26430.1); Has 3217 Blast hits to 3179 proteins in 111 species: Archae - 0; Bacteria - 82; Metazoa - 0; Fungi - 14; Plants - 3119; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative At3g27950, Description = GDSL esterase/lipase, PFAM = )' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold1498_53673-78876' '(at1g53920 : 412.0) Contains lipase signature motif and GDSL domain.; GDSL-motif lipase 5 (GLIP5); FUNCTIONS IN: lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL lipase 1 (TAIR:AT5G40990.1); Has 3342 Blast hits to 3298 proteins in 168 species: Archae - 0; Bacteria - 231; Metazoa - 0; Fungi - 23; Plants - 3083; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|58514 : 340.0) no description available & (p40603|apg_brana : 134.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 824.0) & (original description: Putative GLIP5, Description = GDSL esterase/lipase 5, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold1631_419490-422590' '(gnl|cdd|58514 : 271.0) no description available & (at1g28590 : 267.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G27360.1); Has 3435 Blast hits to 3386 proteins in 204 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 4; Plants - 3124; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (q7y1x1|est_hevbr : 148.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 534.0) & (original description: Putative cgt, Description = SGNH hydrolase-type esterase superfamily protein, putative, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold3790_134364-137416' '(gnl|cdd|58514 : 162.0) no description available & (at1g28650 : 159.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28670.1); Has 3414 Blast hits to 3364 proteins in 185 species: Archae - 0; Bacteria - 266; Metazoa - 0; Fungi - 2; Plants - 3141; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = )' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold4452_96745-112055' '(at5g08460 : 409.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G71250.1); Has 3252 Blast hits to 3210 proteins in 140 species: Archae - 0; Bacteria - 172; Metazoa - 0; Fungi - 11; Plants - 3054; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|58514 : 329.0) no description available & (p40603|apg_brana : 142.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 818.0) & (original description: Putative At5g08460, Description = GDSL esterase/lipase At5g08460, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold4642_8554-12488' '(at2g38180 : 271.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Esterase, SGNH hydrolase-type, subgroup (InterPro:IPR013831), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT3G11210.1); Has 749 Blast hits to 745 proteins in 289 species: Archae - 0; Bacteria - 287; Metazoa - 79; Fungi - 158; Plants - 167; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|38245 : 259.0) no description available & (gnl|cdd|58515 : 228.0) no description available & (reliability: 542.0) & (original description: Putative CPRD49, Description = GDSL esterase/lipase CPRD49, PFAM = PF13472)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold5590_1-18235' '(at1g29670 : 337.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, cell wall, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29660.1); Has 3712 Blast hits to 3673 proteins in 308 species: Archae - 0; Bacteria - 502; Metazoa - 0; Fungi - 62; Plants - 3128; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 299.0) no description available & (p40603|apg_brana : 143.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 674.0) & (original description: Putative LIP1, Description = GDSL esterase/lipase, PFAM = PF00657;PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold6004_78313-94287' '(gnl|cdd|58514 : 279.0) no description available & (at5g03980 : 268.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7y1x1|est_hevbr : 148.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 536.0) & (original description: Putative cgt, Description = GDSL lipase-like chlorogenate-dependent caffeoyltransferase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'nbv0.5scaffold6617_29570-32691' '(gnl|cdd|58514 : 169.0) no description available & (at1g28670 : 162.0) Arabidopsis thaliana lipase; ARAB-1; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28660.1); Has 3359 Blast hits to 3311 proteins in 183 species: Archae - 0; Bacteria - 261; Metazoa - 0; Fungi - 0; Plants - 3095; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q7y1x1|est_hevbr : 80.1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 320.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben044scf00000867ctg038_488-15032' '(gnl|cdd|58514 : 386.0) no description available & (at1g75880 : 384.0) SGNH hydrolase-type esterase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G75890.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p40603|apg_brana : 267.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 744.0) & (original description: Putative EXL1, Description = GDSL esterase/lipase EXL3, PFAM = PF00657;PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben044scf00001659ctg003_1433-6617' '(gnl|cdd|58514 : 334.0) no description available & (at5g45950 : 321.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G45960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40603|apg_brana : 142.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 642.0) & (original description: Putative At5g45950, Description = GDSL esterase/lipase At5g45950, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben044scf00002513ctg002_1-3137' '(gnl|cdd|58514 : 205.0) no description available & (at4g10950 : 203.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G08460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p40603|apg_brana : 80.5) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 406.0) & (original description: Putative PGSC0003DMG400027399, Description = SGNH hydrolase-type esterase superfamily protein, putative isoform 1, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben044scf00003331ctg007_1-6241' '(gnl|cdd|58514 : 123.0) no description available & (at1g29660 : 111.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29670.1); Has 3857 Blast hits to 3814 proteins in 365 species: Archae - 0; Bacteria - 608; Metazoa - 0; Fungi - 87; Plants - 3137; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative LIP1, Description = GDSL esterase/lipase, PFAM = )' T '26.28' 'misc.GDSL-motif lipase' 'niben044scf00005612ctg021_313-2926' '(at3g27950 : 106.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G14450.1); Has 3142 Blast hits to 3112 proteins in 96 species: Archae - 0; Bacteria - 88; Metazoa - 0; Fungi - 8; Plants - 3037; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (q7y1x1|est_hevbr : 102.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 210.0) & (original description: Putative At3g27950, Description = Alpha-L-fucosidase 2, putative, PFAM = )' T '26.28' 'misc.GDSL-motif lipase' 'niben044scf00007218ctg001_3333-6309' '(at1g28650 : 161.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28670.1); Has 3414 Blast hits to 3364 proteins in 185 species: Archae - 0; Bacteria - 266; Metazoa - 0; Fungi - 2; Plants - 3141; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|58514 : 161.0) no description available & (reliability: 314.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = )' T '26.28' 'misc.GDSL-motif lipase' 'niben044scf00008524ctg020_5414-20725' '(at5g08460 : 414.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G71250.1); Has 3252 Blast hits to 3210 proteins in 140 species: Archae - 0; Bacteria - 172; Metazoa - 0; Fungi - 11; Plants - 3054; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|58514 : 329.0) no description available & (p40603|apg_brana : 142.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 828.0) & (original description: Putative At5g08460, Description = GDSL esterase/lipase At5g08460, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben044scf00009781ctg008_10773-15969' '(at5g33370 : 537.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: Li-tolerant lipase 1 (TAIR:AT3G04290.1); Has 2955 Blast hits to 2928 proteins in 93 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 2884; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|58514 : 336.0) no description available & (p40603|apg_brana : 152.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1074.0) & (original description: Putative At5g33370, Description = GDSL esterase/lipase At5g33370, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben044scf00010289ctg027_13479-17951' '(at2g04570 : 427.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G42990.1); Has 3619 Blast hits to 3578 proteins in 263 species: Archae - 0; Bacteria - 457; Metazoa - 0; Fungi - 32; Plants - 3114; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|58514 : 361.0) no description available & (p40603|apg_brana : 194.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 854.0) & (original description: Putative At2g04570, Description = GDSL esterase/lipase At2g04570, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben044scf00014688ctg000_1-4570' '(at5g03610 : 192.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G09930.1); Has 3390 Blast hits to 3360 proteins in 226 species: Archae - 0; Bacteria - 388; Metazoa - 0; Fungi - 3; Plants - 2981; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|58514 : 139.0) no description available & (reliability: 384.0) & (original description: Putative GDSL, Description = GDSL esterase/lipase, PFAM = )' T '26.28' 'misc.GDSL-motif lipase' 'niben044scf00016724ctg010_333-3031' '(at2g24560 : 197.0) GDSL-like Lipase/Acylhydrolase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT1G58430.1); Has 3332 Blast hits to 3298 proteins in 183 species: Archae - 0; Bacteria - 266; Metazoa - 0; Fungi - 6; Plants - 3039; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|58514 : 188.0) no description available & (p40603|apg_brana : 104.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 394.0) & (original description: Putative T3G21, Description = GDSL esterase/lipase, PFAM = )' T '26.28' 'misc.GDSL-motif lipase' 'niben044scf00018969ctg004_651-4938' '(at4g10950 : 510.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G08460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|58514 : 327.0) no description available & (p40603|apg_brana : 123.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1020.0) & (original description: Putative BnaA09g22200D, Description = BnaA09g22200D protein, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben044scf00018969ctg004_723-4106' '(at4g10950 : 356.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G08460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|58514 : 238.0) no description available & (reliability: 712.0) & (original description: Putative At4g10950, Description = SGNH hydrolase-type esterase superfamily protein, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben044scf00019621ctg004_1903-8817' '(at1g71691 : 280.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G33811.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 265.0) no description available & (p40603|apg_brana : 85.5) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 560.0) & (original description: Putative LIP1, Description = GDSL esterase/lipase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben044scf00024241ctg002_756-5176' '(at1g29670 : 309.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, cell wall, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29660.1); Has 3712 Blast hits to 3673 proteins in 308 species: Archae - 0; Bacteria - 502; Metazoa - 0; Fungi - 62; Plants - 3128; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 301.0) no description available & (p40603|apg_brana : 124.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 618.0) & (original description: Putative At1g29660, Description = GDSL esterase/lipase At1g29660, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben044scf00027354ctg000_24298-29107' '(at3g48460 : 246.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28650.1); Has 3350 Blast hits to 3305 proteins in 164 species: Archae - 0; Bacteria - 220; Metazoa - 0; Fungi - 10; Plants - 3113; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|58514 : 236.0) no description available & (q7y1x1|est_hevbr : 107.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 492.0) & (original description: Putative NaFXG1, Description = (1-2)-alpha-L-fucosidase ortholog, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben044scf00029384ctg005_24801-28716' '(at2g24560 : 371.0) GDSL-like Lipase/Acylhydrolase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT1G58430.1); Has 3332 Blast hits to 3298 proteins in 183 species: Archae - 0; Bacteria - 266; Metazoa - 0; Fungi - 6; Plants - 3039; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|58514 : 362.0) no description available & (p40603|apg_brana : 210.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 742.0) & (original description: Putative At2g31550, Description = GDSL esterase/lipase At2g31550, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben044scf00031491ctg003_18863-22883' '(at2g23540 : 545.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G50400.1); Has 3581 Blast hits to 3540 proteins in 243 species: Archae - 0; Bacteria - 373; Metazoa - 0; Fungi - 51; Plants - 3139; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|58514 : 352.0) no description available & (q7y1x1|est_hevbr : 131.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 1090.0) & (original description: Putative At2g23540, Description = GDSL esterase/lipase At2g23540, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben044scf00035312ctg002_3366-8001' '(at5g45670 : 531.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT4G18970.1); Has 3607 Blast hits to 3571 proteins in 263 species: Archae - 0; Bacteria - 416; Metazoa - 0; Fungi - 74; Plants - 3097; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 346.0) no description available & (p40603|apg_brana : 156.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1062.0) & (original description: Putative At5g45670, Description = GDSL esterase/lipase At5g45670, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben044scf00041852ctg000_4415-9052' '(at1g29670 : 305.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, cell wall, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29660.1); Has 3712 Blast hits to 3673 proteins in 308 species: Archae - 0; Bacteria - 502; Metazoa - 0; Fungi - 62; Plants - 3128; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 282.0) no description available & (p40603|apg_brana : 103.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 610.0) & (original description: Putative At2g19050, Description = GDSL esterase/lipase At2g19050, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben044scf00045522ctg004_24155-26720' '(at3g50400 : 147.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G23540.1); Has 3614 Blast hits to 3577 proteins in 268 species: Archae - 0; Bacteria - 447; Metazoa - 0; Fungi - 31; Plants - 3117; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|58514 : 114.0) no description available & (reliability: 294.0) & (original description: Putative csu861, Description = GDSL esterase/lipase, PFAM = )' T '26.28' 'misc.GDSL-motif lipase' 'niben044scf00049158ctg001_1033-5103' '(at3g04290 : 286.0) Li-tolerant lipase 1 (LTL1); FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G33370.1); Has 3364 Blast hits to 3325 proteins in 174 species: Archae - 0; Bacteria - 234; Metazoa - 0; Fungi - 3; Plants - 3111; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|58514 : 196.0) no description available & (p40603|apg_brana : 98.2) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 572.0) & (original description: Putative csu861, Description = GDSL esterase/lipase, PFAM = )' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf00023_286403-320709' '(gnl|cdd|58514 : 328.0) no description available & (at5g55050 : 265.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G50400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40603|apg_brana : 157.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 530.0) & (original description: Putative CPRD47, Description = GDSL esterase/lipase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf00065_36902-41395' '(at1g75900 : 392.0) GDSL-like Lipase/Acylhydrolase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G75880.2); Has 3444 Blast hits to 3405 proteins in 204 species: Archae - 0; Bacteria - 282; Metazoa - 0; Fungi - 26; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|58514 : 388.0) no description available & (p40603|apg_brana : 273.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 734.0) & (original description: Putative EXL3, Description = GDSL esterase/lipase EXL3, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf00067_107630-112413' '(at3g16370 : 506.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G22810.1); Has 3678 Blast hits to 3640 proteins in 303 species: Archae - 0; Bacteria - 507; Metazoa - 0; Fungi - 26; Plants - 3124; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|58514 : 358.0) no description available & (p40603|apg_brana : 192.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1012.0) & (original description: Putative APG, Description = GDSL esterase/lipase APG, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf00288_676305-679038' '(at2g30220 : 384.0) GDSL-like Lipase/Acylhydrolase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT2G30310.1); Has 3378 Blast hits to 3337 proteins in 196 species: Archae - 0; Bacteria - 267; Metazoa - 0; Fungi - 20; Plants - 3071; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 364.0) no description available & (p40603|apg_brana : 228.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 768.0) & (original description: Putative At2g30220, Description = GDSL esterase/lipase At2g30220, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf00408_1145612-1158460' '(at1g71691 : 381.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G33811.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 326.0) no description available & (p40603|apg_brana : 112.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 762.0) & (original description: Putative At1g71691, Description = GDSL esterase/lipase At1g71691, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf00416_571369-574493' '(at5g03980 : 296.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 288.0) no description available & (q7y1x1|est_hevbr : 162.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 592.0) & (original description: Putative cgt, Description = SGNH hydrolase-type esterase superfamily protein, putative, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf00539_163447-196188' '(gnl|cdd|58514 : 388.0) no description available & (at1g75880 : 380.0) SGNH hydrolase-type esterase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G75890.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p40603|apg_brana : 267.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 746.0) & (original description: Putative EXL1, Description = GDSL esterase/lipase EXL3, PFAM = PF00657;PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf00539_182346-185972' '(at1g75880 : 387.0) SGNH hydrolase-type esterase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G75890.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 386.0) no description available & (p40603|apg_brana : 266.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 744.0) & (original description: Putative EXL1, Description = GDSL esterase/lipase EXL1, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf00571_51171-59478' '(gnl|cdd|58514 : 327.0) no description available & (at5g55050 : 283.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G50400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40603|apg_brana : 146.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 566.0) & (original description: Putative At5g55050, Description = GDSL esterase/lipase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf00571_54610-59397' '(gnl|cdd|58514 : 336.0) no description available & (at5g55050 : 294.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G50400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40603|apg_brana : 152.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 588.0) & (original description: Putative At5g55050, Description = GDSL esterase/lipase At5g55050, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf00766_109259-113018' '(at3g26430 : 558.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: alpha-fucosidase 1 (TAIR:AT1G67830.1); Has 3218 Blast hits to 3172 proteins in 104 species: Archae - 0; Bacteria - 74; Metazoa - 0; Fungi - 6; Plants - 3136; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (q7y1x1|est_hevbr : 422.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|58514 : 306.0) no description available & (reliability: 1116.0) & (original description: Putative ache, Description = GDSL-like lipase/acylhydrolase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf00766_133534-149440' '(at3g26430 : 503.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: alpha-fucosidase 1 (TAIR:AT1G67830.1); Has 3218 Blast hits to 3172 proteins in 104 species: Archae - 0; Bacteria - 74; Metazoa - 0; Fungi - 6; Plants - 3136; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (q7y1x1|est_hevbr : 430.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|58514 : 317.0) no description available & (reliability: 1006.0) & (original description: Putative ache, Description = GDSL-like lipase/acylhydrolase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf01005_50807-54853' '(gnl|cdd|58514 : 370.0) no description available & (at2g23540 : 332.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G50400.1); Has 3581 Blast hits to 3540 proteins in 243 species: Archae - 0; Bacteria - 373; Metazoa - 0; Fungi - 51; Plants - 3139; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (p40603|apg_brana : 132.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 664.0) & (original description: Putative At4g16230, Description = GDSL esterase/lipase At4g16230, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf01064_630610-634909' '(at5g45910 : 192.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28650.1); Has 3231 Blast hits to 3179 proteins in 126 species: Archae - 0; Bacteria - 121; Metazoa - 0; Fungi - 0; Plants - 3108; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|58514 : 180.0) no description available & (reliability: 384.0) & (original description: Putative pco061737, Description = GDSL-like lipase/acylhydrolase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf01191_478279-482229' '(at5g03980 : 261.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 254.0) no description available & (q7y1x1|est_hevbr : 142.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 522.0) & (original description: Putative cgt, Description = SGNH hydrolase-type esterase superfamily protein, putative, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf01212_276769-281876' '(gnl|cdd|58514 : 256.0) no description available & (at5g45950 : 242.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G45960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40603|apg_brana : 86.3) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 484.0) & (original description: Putative APG, Description = GDSL esterase/lipase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf01220_343078-353991' '(at5g33370 : 512.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: Li-tolerant lipase 1 (TAIR:AT3G04290.1); Has 2955 Blast hits to 2928 proteins in 93 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 2884; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|58514 : 334.0) no description available & (p40603|apg_brana : 165.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1024.0) & (original description: Putative At5g33370, Description = GDSL esterase/lipase At5g33370, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf01228_173307-183445' '(at1g28570 : 199.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 171.0) no description available & (q7y1x1|est_hevbr : 89.4) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 398.0) & (original description: Putative pco061737, Description = GDSL esterase/lipase At5g45910 family, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf01438_65896-69017' '(gnl|cdd|58514 : 293.0) no description available & (at1g28570 : 271.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7y1x1|est_hevbr : 152.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 542.0) & (original description: Putative AAE, Description = Acetylajmalan esterase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf01497_536036-550482' '(gnl|cdd|58514 : 282.0) no description available & (at5g33370 : 209.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: Li-tolerant lipase 1 (TAIR:AT3G04290.1); Has 2955 Blast hits to 2928 proteins in 93 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 2884; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (p40603|apg_brana : 149.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 418.0) & (original description: Putative si687072a12, Description = GSDL-motif protein lipase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf01603_13647-19807' '(at5g62930 : 223.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Esterase, SGNH hydrolase-type, subgroup (InterPro:IPR013831), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT5G45920.1); Has 689 Blast hits to 688 proteins in 254 species: Archae - 0; Bacteria - 229; Metazoa - 77; Fungi - 158; Plants - 171; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|38245 : 204.0) no description available & (gnl|cdd|58515 : 180.0) no description available & (reliability: 446.0) & (original description: Putative iah1, Description = Isoamyl acetate-hydrolyzing esterase 1 homolog, PFAM = PF13472)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf01670_195543-352277' '(at5g03980 : 90.1) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative PGSC0003DMG400013195, Description = SGNH hydrolase-type esterase superfamily protein, putative, PFAM = )' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf01670_224245-245923' '(gnl|cdd|58514 : 267.0) no description available & (at5g03980 : 258.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7y1x1|est_hevbr : 141.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 516.0) & (original description: Putative cgt, Description = GDSL lipase-like chlorogenate-dependent caffeoyltransferase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf01681_351124-354254' '(gnl|cdd|58514 : 270.0) no description available & (at1g28640 : 269.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28670.1); Has 3448 Blast hits to 3401 proteins in 207 species: Archae - 0; Bacteria - 321; Metazoa - 0; Fungi - 6; Plants - 3118; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q7y1x1|est_hevbr : 135.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 538.0) & (original description: Putative cgt, Description = SGNH hydrolase-type esterase superfamily protein, putative, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf01702_144412-152434' '(gnl|cdd|58514 : 386.0) no description available & (at1g75900 : 377.0) GDSL-like Lipase/Acylhydrolase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G75880.2); Has 3444 Blast hits to 3405 proteins in 204 species: Archae - 0; Bacteria - 282; Metazoa - 0; Fungi - 26; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (p40603|apg_brana : 271.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 726.0) & (original description: Putative EXL3, Description = GDSL esterase/lipase EXL3, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf01702_145770-151618' '(at1g75900 : 254.0) GDSL-like Lipase/Acylhydrolase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G75880.2); Has 3444 Blast hits to 3405 proteins in 204 species: Archae - 0; Bacteria - 282; Metazoa - 0; Fungi - 26; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|58514 : 254.0) no description available & (p40603|apg_brana : 162.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 466.0) & (original description: Putative EXL1, Description = GDSL esterase/lipase EXL3, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf01740_1611353-1620652' '(at5g03980 : 288.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 259.0) no description available & (q7y1x1|est_hevbr : 149.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 576.0) & (original description: Putative cgt, Description = GDSL lipase-like chlorogenate-dependent caffeoyltransferase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf01826_539006-543433' '(at3g48460 : 430.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28650.1); Has 3350 Blast hits to 3305 proteins in 164 species: Archae - 0; Bacteria - 220; Metazoa - 0; Fungi - 10; Plants - 3113; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|58514 : 286.0) no description available & (q7y1x1|est_hevbr : 154.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 860.0) & (original description: Putative At3g48460, Description = GDSL esterase/lipase At3g48460, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf02073_791531-798166' '(at1g71691 : 458.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G33811.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 345.0) no description available & (p40603|apg_brana : 134.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 916.0) & (original description: Putative At1g71691, Description = GDSL esterase/lipase At1g71691, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf02073_791680-795289' '(at1g71691 : 305.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G33811.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 222.0) no description available & (reliability: 610.0) & (original description: Putative BnaCnng66890D, Description = BnaCnng66890D protein, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf02117_18361-25732' '(at1g33811 : 501.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G45670.1); Has 3440 Blast hits to 3395 proteins in 215 species: Archae - 0; Bacteria - 336; Metazoa - 0; Fungi - 3; Plants - 3084; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|58514 : 342.0) no description available & (p40603|apg_brana : 155.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1002.0) & (original description: Putative At1g33811, Description = GDSL esterase/lipase At1g33811, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf02207_938351-949849' '(at5g62930 : 365.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Esterase, SGNH hydrolase-type, subgroup (InterPro:IPR013831), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT5G45920.1); Has 689 Blast hits to 688 proteins in 254 species: Archae - 0; Bacteria - 229; Metazoa - 77; Fungi - 158; Plants - 171; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|38245 : 300.0) no description available & (gnl|cdd|58515 : 260.0) no description available & (reliability: 730.0) & (original description: Putative At5g62930, Description = GDSL esterase/lipase At5g62930, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf02387_50552-55345' '(gnl|cdd|58514 : 185.0) no description available & (at5g55050 : 140.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G50400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40603|apg_brana : 84.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 280.0) & (original description: Putative si687072a12, Description = GDSL-like lipase/acylhydrolase, PFAM = )' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf02387_59431-65078' '(gnl|cdd|58514 : 336.0) no description available & (at5g55050 : 274.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G50400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40603|apg_brana : 151.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 548.0) & (original description: Putative At5g55050, Description = GDSL esterase/lipase At5g55050, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf02406_84429-87626' '(gnl|cdd|58514 : 162.0) no description available & (at5g03980 : 150.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf02408_203674-206798' '(gnl|cdd|58514 : 169.0) no description available & (at1g28650 : 164.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28670.1); Has 3414 Blast hits to 3364 proteins in 185 species: Archae - 0; Bacteria - 266; Metazoa - 0; Fungi - 2; Plants - 3141; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (q7y1x1|est_hevbr : 86.7) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 320.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf02869_1239223-1250296' '(at1g28580 : 300.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G28570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 300.0) no description available & (q7y1x1|est_hevbr : 125.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 600.0) & (original description: Putative Os05g0209600, Description = Os05g0209600 protein, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf03023_415758-423810' '(at1g28590 : 386.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G27360.1); Has 3435 Blast hits to 3386 proteins in 204 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 4; Plants - 3124; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|58514 : 331.0) no description available & (q7y1x1|est_hevbr : 153.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 772.0) & (original description: Putative At1g28600, Description = GDSL esterase/lipase At1g28600, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf03062_586205-590743' '(gnl|cdd|58514 : 361.0) no description available & (at2g40250 : 359.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell, sepal, pedicel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G31540.1); Has 3497 Blast hits to 3457 proteins in 215 species: Archae - 0; Bacteria - 337; Metazoa - 0; Fungi - 15; Plants - 3125; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (p40603|apg_brana : 232.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 718.0) & (original description: Putative At2g40250, Description = GDSL esterase/lipase At2g40250, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf03121_1-3749' '(gnl|cdd|58514 : 316.0) no description available & (at5g40990 : 301.0) Component of plant resistance. Contains lipase signature motif and GDSL domain. Directly interferes with the fungal infection process by acting on fungal cell walls through its action as a antimicrobial compound. Critical component for both local and systemic resistance responses in the incompatible interaction with Alternaria brassicicola in the ethylene-dependent pathway.; GDSL lipase 1 (GLIP1); CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-motif lipase 2 (TAIR:AT1G53940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40603|apg_brana : 136.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 602.0) & (original description: Putative BnaCnng62410D, Description = BnaCnng62410D protein, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf03143_1147990-1154143' '(at3g26430 : 507.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: alpha-fucosidase 1 (TAIR:AT1G67830.1); Has 3218 Blast hits to 3172 proteins in 104 species: Archae - 0; Bacteria - 74; Metazoa - 0; Fungi - 6; Plants - 3136; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (q7y1x1|est_hevbr : 432.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|58514 : 319.0) no description available & (reliability: 1014.0) & (original description: Putative ache, Description = GDSL-like lipase/acylhydrolase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf03257_199453-204210' '(at1g71250 : 472.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G08460.1); Has 3499 Blast hits to 3462 proteins in 237 species: Archae - 0; Bacteria - 354; Metazoa - 0; Fungi - 36; Plants - 3096; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|58514 : 331.0) no description available & (p40603|apg_brana : 147.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 944.0) & (original description: Putative BnaA07g23600D, Description = BnaA07g23590D protein, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf03273_307895-313496' '(at1g71691 : 464.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G33811.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 349.0) no description available & (p40603|apg_brana : 130.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 928.0) & (original description: Putative At1g71691, Description = GDSL esterase/lipase At1g71691, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf03273_375908-386660' '(gnl|cdd|58514 : 212.0) no description available & (at1g71691 : 209.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G33811.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 418.0) & (original description: Putative Ccrd_022299, Description = Lipase, GDSL, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf03295_660116-664928' '(gnl|cdd|58514 : 314.0) no description available & (at1g53920 : 292.0) Contains lipase signature motif and GDSL domain.; GDSL-motif lipase 5 (GLIP5); FUNCTIONS IN: lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL lipase 1 (TAIR:AT5G40990.1); Has 3342 Blast hits to 3298 proteins in 168 species: Archae - 0; Bacteria - 231; Metazoa - 0; Fungi - 23; Plants - 3083; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (p40603|apg_brana : 110.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 584.0) & (original description: Putative GLIP5, Description = GDSL esterase/lipase 5, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf03300_575441-578687' '(at5g03980 : 162.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 162.0) no description available & (q7y1x1|est_hevbr : 83.2) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 324.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf03340_567593-583852' '(gnl|cdd|58514 : 288.0) no description available & (at1g71250 : 224.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G08460.1); Has 3499 Blast hits to 3462 proteins in 237 species: Archae - 0; Bacteria - 354; Metazoa - 0; Fungi - 36; Plants - 3096; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p40603|apg_brana : 142.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 448.0) & (original description: Putative RCOM_0664320, Description = Zinc finger protein, putative, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf03497_970503-973630' '(gnl|cdd|58514 : 279.0) no description available & (at1g28640 : 260.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28670.1); Has 3448 Blast hits to 3401 proteins in 207 species: Archae - 0; Bacteria - 321; Metazoa - 0; Fungi - 6; Plants - 3118; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q7y1x1|est_hevbr : 145.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 520.0) & (original description: Putative cgt, Description = GDSL lipase-like chlorogenate-dependent caffeoyltransferase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf03497_1024418-1027548' '(gnl|cdd|58514 : 289.0) no description available & (at1g28570 : 268.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7y1x1|est_hevbr : 145.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 536.0) & (original description: Putative AAE, Description = Acetylajmalan esterase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf03674_121652-154011' '(at5g03610 : 421.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G09930.1); Has 3390 Blast hits to 3360 proteins in 226 species: Archae - 0; Bacteria - 388; Metazoa - 0; Fungi - 3; Plants - 2981; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|58514 : 260.0) no description available & (p40603|apg_brana : 113.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 842.0) & (original description: Putative At5g03610, Description = GDSL esterase/lipase At5g03610, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf03786_64999-71373' '(at2g04570 : 412.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G42990.1); Has 3619 Blast hits to 3578 proteins in 263 species: Archae - 0; Bacteria - 457; Metazoa - 0; Fungi - 32; Plants - 3114; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|58514 : 355.0) no description available & (p40603|apg_brana : 172.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 824.0) & (original description: Putative At2g04570, Description = GDSL esterase/lipase At2g04570, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf03913_105991-109195' '(gnl|cdd|58514 : 300.0) no description available & (at5g55050 : 214.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G50400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40603|apg_brana : 143.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 428.0) & (original description: Putative si687072a12, Description = GSDL-motif protein lipase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf03949_495713-499934' '(at1g71250 : 477.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G08460.1); Has 3499 Blast hits to 3462 proteins in 237 species: Archae - 0; Bacteria - 354; Metazoa - 0; Fungi - 36; Plants - 3096; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|58514 : 332.0) no description available & (p40603|apg_brana : 145.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 954.0) & (original description: Putative At1g71250, Description = GDSL esterase/lipase At1g71250, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf03964_215198-219347' '(at2g30220 : 360.0) GDSL-like Lipase/Acylhydrolase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT2G30310.1); Has 3378 Blast hits to 3337 proteins in 196 species: Archae - 0; Bacteria - 267; Metazoa - 0; Fungi - 20; Plants - 3071; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 351.0) no description available & (p40603|apg_brana : 199.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 720.0) & (original description: Putative At2g42990, Description = GDSL esterase/lipase At2g42990, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf03973_40457-45372' '(at5g22810 : 480.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT5G03820.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 361.0) no description available & (p40603|apg_brana : 226.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 960.0) & (original description: Putative At5g22810, Description = GDSL esterase/lipase At5g22810, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf04015_195685-199283' '(at1g54790 : 581.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G05180.1). & (gnl|cdd|58514 : 301.0) no description available & (q7y1x1|est_hevbr : 290.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 1162.0) & (original description: Putative ache, Description = GDSL esterase/lipase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf04044_1353821-1363892' '(at3g11210 : 410.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Esterase, SGNH hydrolase-type, subgroup (InterPro:IPR013831), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT2G38180.1); Has 768 Blast hits to 767 proteins in 294 species: Archae - 0; Bacteria - 304; Metazoa - 76; Fungi - 152; Plants - 166; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|38245 : 315.0) no description available & (gnl|cdd|58515 : 245.0) no description available & (reliability: 820.0) & (original description: Putative CPRD49, Description = GDSL esterase/lipase CPRD49, PFAM = PF13472)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf04109_326630-332925' '(at1g71120 : 471.0) Contains lipase signature motif and GDSL domain.; GDSL-motif lipase/hydrolase 6 (GLIP6); FUNCTIONS IN: lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-motif lipase 7 (TAIR:AT5G15720.1); Has 3560 Blast hits to 3519 proteins in 249 species: Archae - 0; Bacteria - 402; Metazoa - 0; Fungi - 22; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|58514 : 306.0) no description available & (p40603|apg_brana : 155.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 942.0) & (original description: Putative GLIP6, Description = GDSL esterase/lipase 6, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf04230_9846-14877' '(at5g33370 : 537.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: Li-tolerant lipase 1 (TAIR:AT3G04290.1); Has 2955 Blast hits to 2928 proteins in 93 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 2884; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|58514 : 336.0) no description available & (p40603|apg_brana : 152.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1074.0) & (original description: Putative At5g33370, Description = GDSL esterase/lipase At5g33370, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf04738_261561-266329' '(at5g33370 : 531.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: Li-tolerant lipase 1 (TAIR:AT3G04290.1); Has 2955 Blast hits to 2928 proteins in 93 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 2884; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|58514 : 326.0) no description available & (p40603|apg_brana : 155.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1062.0) & (original description: Putative At5g18430, Description = GDSL esterase/lipase At5g18430, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf04875_725980-730406' '(at5g03820 : 469.0) GDSL-like Lipase/Acylhydrolase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT5G03810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 330.0) no description available & (p40603|apg_brana : 202.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 938.0) & (original description: Putative At5g03810, Description = GDSL esterase/lipase At5g03810, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf05078_887387-891893' '(gnl|cdd|58514 : 222.0) no description available & (at4g10950 : 208.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G08460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p40603|apg_brana : 86.7) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 416.0) & (original description: Putative PGSC0003DMG400027399, Description = SGNH hydrolase-type esterase superfamily protein, putative isoform 1, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf05109_157482-160180' '(at2g30310 : 197.0) GDSL-like Lipase/Acylhydrolase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT2G30220.1); Has 3442 Blast hits to 3404 proteins in 209 species: Archae - 0; Bacteria - 309; Metazoa - 0; Fungi - 18; Plants - 3094; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|58514 : 188.0) no description available & (p40603|apg_brana : 104.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 394.0) & (original description: Putative T3G21, Description = GDSL esterase/lipase, PFAM = )' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf05123_341538-354059' '(at1g53920 : 385.0) Contains lipase signature motif and GDSL domain.; GDSL-motif lipase 5 (GLIP5); FUNCTIONS IN: lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL lipase 1 (TAIR:AT5G40990.1); Has 3342 Blast hits to 3298 proteins in 168 species: Archae - 0; Bacteria - 231; Metazoa - 0; Fungi - 23; Plants - 3083; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|58514 : 335.0) no description available & (p40603|apg_brana : 110.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 770.0) & (original description: Putative GLIP5, Description = GDSL esterase/lipase 5, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf05124_67910-72702' '(at3g16370 : 503.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G22810.1); Has 3678 Blast hits to 3640 proteins in 303 species: Archae - 0; Bacteria - 507; Metazoa - 0; Fungi - 26; Plants - 3124; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|58514 : 358.0) no description available & (p40603|apg_brana : 188.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1006.0) & (original description: Putative APG, Description = GDSL esterase/lipase APG, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf05230_204350-209677' '(at5g14450 : 505.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G26430.1); Has 3217 Blast hits to 3179 proteins in 111 species: Archae - 0; Bacteria - 82; Metazoa - 0; Fungi - 14; Plants - 3119; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (q7y1x1|est_hevbr : 339.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|58514 : 286.0) no description available & (reliability: 1010.0) & (original description: Putative ache, Description = Acetylcholinesterase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf05324_394381-399921' '(at3g48460 : 246.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28650.1); Has 3350 Blast hits to 3305 proteins in 164 species: Archae - 0; Bacteria - 220; Metazoa - 0; Fungi - 10; Plants - 3113; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|58514 : 235.0) no description available & (q7y1x1|est_hevbr : 107.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 492.0) & (original description: Putative NaFXG1, Description = (1-2)-alpha-L-fucosidase ortholog, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf05674_307004-310826' '(at2g23540 : 550.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G50400.1); Has 3581 Blast hits to 3540 proteins in 243 species: Archae - 0; Bacteria - 373; Metazoa - 0; Fungi - 51; Plants - 3139; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|58514 : 356.0) no description available & (q7y1x1|est_hevbr : 134.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 1100.0) & (original description: Putative At2g23540, Description = GDSL esterase/lipase At2g23540, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf05674_308251-310850' '(at3g50400 : 147.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G23540.1); Has 3614 Blast hits to 3577 proteins in 268 species: Archae - 0; Bacteria - 447; Metazoa - 0; Fungi - 31; Plants - 3117; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|58514 : 114.0) no description available & (reliability: 294.0) & (original description: Putative SGNH, Description = GDSL esterase/lipase, PFAM = )' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf05731_32930-36030' '(at1g28590 : 285.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G27360.1); Has 3435 Blast hits to 3386 proteins in 204 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 4; Plants - 3124; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|58514 : 278.0) no description available & (q7y1x1|est_hevbr : 160.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 570.0) & (original description: Putative cgt, Description = SGNH hydrolase-type esterase superfamily protein, putative, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf06054_49736-78891' '(at1g53920 : 330.0) Contains lipase signature motif and GDSL domain.; GDSL-motif lipase 5 (GLIP5); FUNCTIONS IN: lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL lipase 1 (TAIR:AT5G40990.1); Has 3342 Blast hits to 3298 proteins in 168 species: Archae - 0; Bacteria - 231; Metazoa - 0; Fungi - 23; Plants - 3083; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|58514 : 280.0) no description available & (q7y1x1|est_hevbr : 113.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 660.0) & (original description: Putative GLIP, Description = GDSL esterase/lipase 5, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf06076_151502-158872' '(gnl|cdd|58514 : 314.0) no description available & (at5g15720 : 275.0) Contains lipase signature motif and GDSL domain.; GDSL-motif lipase 7 (GLIP7); FUNCTIONS IN: lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p40603|apg_brana : 154.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 550.0) & (original description: Putative GLIP7, Description = GDSL esterase/lipase 7, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf06249_295010-299061' '(at1g74460 : 549.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, hypocotyl, root, flower, carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT5G37690.1); Has 3571 Blast hits to 3529 proteins in 266 species: Archae - 0; Bacteria - 429; Metazoa - 0; Fungi - 48; Plants - 3074; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 327.0) no description available & (p40603|apg_brana : 165.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1098.0) & (original description: Putative At1g74460, Description = GDSL esterase/lipase At1g74460, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf06287_17904-26356' '(at5g45920 : 352.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Esterase, SGNH hydrolase-type, subgroup (InterPro:IPR013831), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT5G62930.1); Has 723 Blast hits to 722 proteins in 270 species: Archae - 0; Bacteria - 249; Metazoa - 79; Fungi - 169; Plants - 173; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|38245 : 286.0) no description available & (gnl|cdd|58515 : 248.0) no description available & (reliability: 704.0) & (original description: Putative iah1, Description = Isoamyl acetate-hydrolyzing esterase 1 homolog, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf06311_217814-221035' '(at1g06990 : 169.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT2G24560.1); Has 3486 Blast hits to 3444 proteins in 207 species: Archae - 0; Bacteria - 314; Metazoa - 0; Fungi - 25; Plants - 3124; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|58514 : 168.0) no description available & (p40603|apg_brana : 103.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 338.0) & (original description: Putative T3G21, Description = GDSL esterase/lipase EXL3, PFAM = )' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf06412_294056-304289' '(at1g09390 : 367.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G56670.1); Has 3339 Blast hits to 3301 proteins in 169 species: Archae - 0; Bacteria - 205; Metazoa - 0; Fungi - 26; Plants - 3101; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|58514 : 273.0) no description available & (q7y1x1|est_hevbr : 212.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 734.0) & (original description: Putative ache, Description = GDSL esterase/lipase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf06584_2554-8628' '(at5g33370 : 575.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: Li-tolerant lipase 1 (TAIR:AT3G04290.1); Has 2955 Blast hits to 2928 proteins in 93 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 2884; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|58514 : 351.0) no description available & (p40603|apg_brana : 164.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1150.0) & (original description: Putative At5g33370, Description = GDSL esterase/lipase At5g33370, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf06664_52039-58291' '(at5g33370 : 552.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: Li-tolerant lipase 1 (TAIR:AT3G04290.1); Has 2955 Blast hits to 2928 proteins in 93 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 2884; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|58514 : 349.0) no description available & (p40603|apg_brana : 167.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1104.0) & (original description: Putative At2g23540, Description = GDSL esterase/lipase At2g23540, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf06909_408549-411688' '(at1g28590 : 289.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G27360.1); Has 3435 Blast hits to 3386 proteins in 204 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 4; Plants - 3124; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|58514 : 284.0) no description available & (q7y1x1|est_hevbr : 167.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 578.0) & (original description: Putative AAE, Description = Acetylajmalan esterase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf07441_363437-369215' '(at5g33370 : 572.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: Li-tolerant lipase 1 (TAIR:AT3G04290.1); Has 2955 Blast hits to 2928 proteins in 93 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 2884; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|58514 : 352.0) no description available & (p40603|apg_brana : 164.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1144.0) & (original description: Putative At5g33370, Description = GDSL esterase/lipase At5g33370, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf07466_735191-740120' '(at5g03980 : 204.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 168.0) no description available & (q7y1x1|est_hevbr : 103.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 408.0) & (original description: Putative At2g27360, Description = SGNH hydrolase-type esterase superfamily protein, putative, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf07533_384664-398385' '(at2g42990 : 427.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G04570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 364.0) no description available & (p40603|apg_brana : 192.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 854.0) & (original description: Putative At2g42990, Description = GDSL esterase/lipase At2g42990, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf07812_45365-50223' '(at1g29670 : 330.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, cell wall, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29660.1); Has 3712 Blast hits to 3673 proteins in 308 species: Archae - 0; Bacteria - 502; Metazoa - 0; Fungi - 62; Plants - 3128; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 294.0) no description available & (p40603|apg_brana : 142.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 660.0) & (original description: Putative BnaC03g68070D, Description = BnaC03g68070D protein, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf07812_96767-100836' '(at1g29670 : 312.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, cell wall, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29660.1); Has 3712 Blast hits to 3673 proteins in 308 species: Archae - 0; Bacteria - 502; Metazoa - 0; Fungi - 62; Plants - 3128; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 302.0) no description available & (p40603|apg_brana : 128.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 624.0) & (original description: Putative At1g29670, Description = GDSL esterase/lipase At1g29670, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf08047_330985-334973' '(gnl|cdd|58514 : 303.0) no description available & (at5g55050 : 210.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G50400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40603|apg_brana : 145.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 420.0) & (original description: Putative si687072a12, Description = GSDL-motif protein lipase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf08195_790050-795361' '(at5g45670 : 541.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT4G18970.1); Has 3607 Blast hits to 3571 proteins in 263 species: Archae - 0; Bacteria - 416; Metazoa - 0; Fungi - 74; Plants - 3097; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 347.0) no description available & (p40603|apg_brana : 164.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1082.0) & (original description: Putative At1g33811, Description = GDSL esterase/lipase At1g33811, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf08195_853394-858455' '(at1g29670 : 303.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, cell wall, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29660.1); Has 3712 Blast hits to 3673 proteins in 308 species: Archae - 0; Bacteria - 502; Metazoa - 0; Fungi - 62; Plants - 3128; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 268.0) no description available & (p40603|apg_brana : 102.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 606.0) & (original description: Putative At5g45670, Description = GDSL esterase/lipase At5g45670, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf08294_702315-706930' '(at2g42990 : 398.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G04570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 342.0) no description available & (p40603|apg_brana : 182.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 796.0) & (original description: Putative At2g04570, Description = GDSL esterase/lipase At2g04570, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf08413_16288-24852' '(at1g28580 : 308.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G28570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 302.0) no description available & (q7y1x1|est_hevbr : 122.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 616.0) & (original description: Putative At1g28580, Description = GDSL esterase/lipase At1g28580, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf08465_334896-340886' '(at5g37690 : 482.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G74460.1); Has 3491 Blast hits to 3453 proteins in 233 species: Archae - 0; Bacteria - 356; Metazoa - 0; Fungi - 50; Plants - 3074; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|58514 : 350.0) no description available & (p40603|apg_brana : 162.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 964.0) & (original description: Putative At5g37690, Description = GDSL esterase/lipase At5g37690, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf08670_13695-19443' '(at5g45960 : 373.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G06990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 343.0) no description available & (p40603|apg_brana : 203.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 746.0) & (original description: Putative At5g45960, Description = GDSL esterase/lipase At5g45960, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf08777_285735-288844' '(at1g28590 : 300.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G27360.1); Has 3435 Blast hits to 3386 proteins in 204 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 4; Plants - 3124; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|58514 : 290.0) no description available & (q7y1x1|est_hevbr : 152.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 600.0) & (original description: Putative cgt, Description = SGNH hydrolase-type esterase superfamily protein, putative, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf08785_71392-87824' '(gnl|cdd|58514 : 173.0) no description available & (at5g45670 : 125.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT4G18970.1); Has 3607 Blast hits to 3571 proteins in 263 species: Archae - 0; Bacteria - 416; Metazoa - 0; Fungi - 74; Plants - 3097; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative LIP1, Description = GDSL esterase/lipase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf08975_358720-364920' '(at3g11210 : 333.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Esterase, SGNH hydrolase-type, subgroup (InterPro:IPR013831), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT2G38180.1); Has 768 Blast hits to 767 proteins in 294 species: Archae - 0; Bacteria - 304; Metazoa - 76; Fungi - 152; Plants - 166; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|38245 : 287.0) no description available & (gnl|cdd|58515 : 238.0) no description available & (reliability: 666.0) & (original description: Putative CPRD49, Description = GDSL esterase/lipase CPRD49, PFAM = PF13472)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf09079_206092-210749' '(gnl|cdd|58514 : 349.0) no description available & (at2g24560 : 344.0) GDSL-like Lipase/Acylhydrolase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT1G58430.1); Has 3332 Blast hits to 3298 proteins in 183 species: Archae - 0; Bacteria - 266; Metazoa - 0; Fungi - 6; Plants - 3039; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (p40603|apg_brana : 186.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 688.0) & (original description: Putative T3G21, Description = GDSL-like lipase/acylhydrolase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf09079_213625-223002' '(at2g24560 : 367.0) GDSL-like Lipase/Acylhydrolase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT1G58430.1); Has 3332 Blast hits to 3298 proteins in 183 species: Archae - 0; Bacteria - 266; Metazoa - 0; Fungi - 6; Plants - 3039; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|58514 : 359.0) no description available & (p40603|apg_brana : 209.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 734.0) & (original description: Putative At2g24560, Description = GDSL esterase/lipase At2g24560, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf09127_33199-49974' '(at5g03980 : 273.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 239.0) no description available & (q7y1x1|est_hevbr : 117.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 546.0) & (original description: Putative cgt, Description = GDSL lipase-like chlorogenate-dependent caffeoyltransferase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf09424_363998-368680' '(at1g75900 : 363.0) GDSL-like Lipase/Acylhydrolase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G75880.2); Has 3444 Blast hits to 3405 proteins in 204 species: Archae - 0; Bacteria - 282; Metazoa - 0; Fungi - 26; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|58514 : 342.0) no description available & (p40603|apg_brana : 235.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 662.0) & (original description: Putative EXL1, Description = GDSL esterase/lipase EXL3, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf09871_59090-72043' '(at1g09390 : 503.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G56670.1); Has 3339 Blast hits to 3301 proteins in 169 species: Archae - 0; Bacteria - 205; Metazoa - 0; Fungi - 26; Plants - 3101; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|58514 : 307.0) no description available & (q7y1x1|est_hevbr : 263.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 1006.0) & (original description: Putative At1g09390, Description = GDSL esterase/lipase At1g09390, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf11009_189302-192414' '(gnl|cdd|58514 : 282.0) no description available & (at5g03980 : 254.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7y1x1|est_hevbr : 153.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 508.0) & (original description: Putative AAE, Description = Acetylajmalan esterase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf12205_107622-110603' '(at1g29670 : 216.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, cell wall, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29660.1); Has 3712 Blast hits to 3673 proteins in 308 species: Archae - 0; Bacteria - 502; Metazoa - 0; Fungi - 62; Plants - 3128; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 163.0) no description available & (reliability: 432.0) & (original description: Putative LIP1, Description = GDSL esterase/lipase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf12205_134385-138492' '(at1g29670 : 530.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, cell wall, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29660.1); Has 3712 Blast hits to 3673 proteins in 308 species: Archae - 0; Bacteria - 502; Metazoa - 0; Fungi - 62; Plants - 3128; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 351.0) no description available & (p40603|apg_brana : 159.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1060.0) & (original description: Putative At1g29670, Description = GDSL esterase/lipase At1g29670, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf12205_169792-174467' '(at5g45670 : 539.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT4G18970.1); Has 3607 Blast hits to 3571 proteins in 263 species: Archae - 0; Bacteria - 416; Metazoa - 0; Fungi - 74; Plants - 3097; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|58514 : 347.0) no description available & (p40603|apg_brana : 169.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1078.0) & (original description: Putative At5g45670, Description = GDSL esterase/lipase At5g45670, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf12367_111625-116636' '(at5g33370 : 505.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: Li-tolerant lipase 1 (TAIR:AT3G04290.1); Has 2955 Blast hits to 2928 proteins in 93 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 2884; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|58514 : 342.0) no description available & (p40603|apg_brana : 155.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 1010.0) & (original description: Putative At4g28780, Description = GDSL esterase/lipase At4g28780, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf12639_124480-132379' '(gnl|cdd|58514 : 294.0) no description available & (at1g29660 : 281.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29670.1); Has 3857 Blast hits to 3814 proteins in 365 species: Archae - 0; Bacteria - 608; Metazoa - 0; Fungi - 87; Plants - 3137; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (p40603|apg_brana : 85.9) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 562.0) & (original description: Putative LIP1, Description = GDSL esterase/lipase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf12983_223795-226943' '(gnl|cdd|58514 : 156.0) no description available & (at1g28640 : 146.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28670.1); Has 3448 Blast hits to 3401 proteins in 207 species: Archae - 0; Bacteria - 321; Metazoa - 0; Fungi - 6; Plants - 3118; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative PGSC0003DMG400025824, Description = , PFAM = )' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf16114_271789-278637' '(gnl|cdd|58514 : 324.0) no description available & (at5g40990 : 318.0) Component of plant resistance. Contains lipase signature motif and GDSL domain. Directly interferes with the fungal infection process by acting on fungal cell walls through its action as a antimicrobial compound. Critical component for both local and systemic resistance responses in the incompatible interaction with Alternaria brassicicola in the ethylene-dependent pathway.; GDSL lipase 1 (GLIP1); CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-motif lipase 2 (TAIR:AT1G53940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40603|apg_brana : 128.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 636.0) & (original description: Putative GLIP2, Description = GDSL esterase/lipase 2, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf17701_91783-99269' '(at5g41890 : 471.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G50400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 340.0) no description available & (p40603|apg_brana : 132.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 942.0) & (original description: Putative At5g41890, Description = GDSL esterase/lipase At5g41890, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf28415_27164-32085' '(at3g48460 : 248.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28650.1); Has 3350 Blast hits to 3305 proteins in 164 species: Archae - 0; Bacteria - 220; Metazoa - 0; Fungi - 10; Plants - 3113; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|58514 : 236.0) no description available & (q7y1x1|est_hevbr : 108.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 496.0) & (original description: Putative NaFXG1, Description = (1-2)-alpha-L-fucosidase ortholog, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf31398_21470-28196' '(at5g45960 : 310.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G06990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 282.0) no description available & (p40603|apg_brana : 180.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 620.0) & (original description: Putative Ccrd_008578, Description = Lipase, GDSL, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf31398_25939-29251' '(at5g45960 : 173.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G06990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 153.0) no description available & (p40603|apg_brana : 91.3) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 346.0) & (original description: Putative APG, Description = GDSL-like lipase/acylhydrolase, PFAM = PF00657)' T '26.28' 'misc.GDSL-motif lipase' 'niben101scf34748_61668-68892' '(at5g45960 : 407.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G06990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58514 : 342.0) no description available & (p40603|apg_brana : 197.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 814.0) & (original description: Putative At5g45960, Description = GDSL esterase/lipase At5g45960, PFAM = PF00657)' T '26.30' 'misc. other Ferredoxins and Rieske domain' 'nbv0.3scaffold3294_65441-74912' '(at4g21090 : 228.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 192.0) no description available & (reliability: 448.0) & (original description: Putative fdx, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T '26.30' 'misc. other Ferredoxins and Rieske domain' 'nbv0.3scaffold22653_26358-28810' '(at1g71500 : 119.0) Rieske (2Fe-2S) domain-containing protein; FUNCTIONS IN: oxidoreductase activity, 2 iron, 2 sulfur cluster binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941); Has 295 Blast hits to 295 proteins in 102 species: Archae - 0; Bacteria - 166; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative At1g71500, Description = Rieske (2Fe-2S) domain-containing protein, PFAM = PF13806)' T '26.30' 'misc. other Ferredoxins and Rieske domain' 'nbv0.5scaffold932_55235-179396' '(at1g32550 : 85.1) Encodes FdC1, a ferredoxin protein capable of alternative electron partitioning. FdC1 level increases in conditions of acceptor limitation at PSI.; 2Fe-2S ferredoxin-like superfamily protein; FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: ferredoxin 1 (TAIR:AT1G10960.1); Has 2669 Blast hits to 2667 proteins in 530 species: Archae - 94; Bacteria - 1212; Metazoa - 6; Fungi - 1; Plants - 619; Viruses - 5; Other Eukaryotes - 732 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative FdC1, Description = Putative ferredoxin, PFAM = )' T '26.30' 'misc. other Ferredoxins and Rieske domain' 'nbv0.5scaffold1066_285652-293460' '(at4g21090 : 225.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 189.0) no description available & (reliability: 448.0) & (original description: Putative adxhom, Description = Ferredoxin, PFAM = PF00111)' T '26.30' 'misc. other Ferredoxins and Rieske domain' 'nbv0.5scaffold1548_15330-23266' '(at1g32550 : 207.0) Encodes FdC1, a ferredoxin protein capable of alternative electron partitioning. FdC1 level increases in conditions of acceptor limitation at PSI.; 2Fe-2S ferredoxin-like superfamily protein; FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: ferredoxin 1 (TAIR:AT1G10960.1); Has 2669 Blast hits to 2667 proteins in 530 species: Archae - 94; Bacteria - 1212; Metazoa - 6; Fungi - 1; Plants - 619; Viruses - 5; Other Eukaryotes - 732 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative fdx, Description = Ferredoxin (2Fe-2S), PFAM = PF00111)' T '26.30' 'misc. other Ferredoxins and Rieske domain' 'nbv0.5scaffold2318_234619-252823' '(at4g05450 : 229.0) mitochondrial ferredoxin 1 (MFDX1); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: pollen tube development; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: MITOCHONDRIAL FERREDOXIN 2 (TAIR:AT4G21090.3); Has 4425 Blast hits to 4425 proteins in 1188 species: Archae - 2; Bacteria - 2167; Metazoa - 246; Fungi - 135; Plants - 85; Viruses - 0; Other Eukaryotes - 1790 (source: NCBI BLink). & (gnl|cdd|38519 : 192.0) no description available & (reliability: 458.0) & (original description: Putative fdxB, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T '26.30' 'misc. other Ferredoxins and Rieske domain' 'nbv0.5scaffold2683_193068-215585' '(at4g21090 : 226.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 190.0) no description available & (reliability: 442.0) & (original description: Putative fdx, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T '26.30' 'misc. other Ferredoxins and Rieske domain' 'nbv0.5scaffold3237_105933-108385' '(at1g71500 : 118.0) Rieske (2Fe-2S) domain-containing protein; FUNCTIONS IN: oxidoreductase activity, 2 iron, 2 sulfur cluster binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941); Has 295 Blast hits to 295 proteins in 102 species: Archae - 0; Bacteria - 166; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative At1g71500, Description = Rieske (2Fe-2S) domain-containing protein, PFAM = PF13806)' T '26.30' 'misc. other Ferredoxins and Rieske domain' 'niben044ctg26167358_1-4718' '(at4g21090 : 222.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 186.0) no description available & (reliability: 438.0) & (original description: Putative fdxB, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T '26.30' 'misc. other Ferredoxins and Rieske domain' 'niben044scf00000060ctg003_1-1491' '(at4g25650 : 171.0) Similar to ACD1. Leaves of antisense ACD1-like plants turn yellow in darkness like wild-type whereas antisense ACD1 plants remain dark after five days of dark treatment.; ACD1-like (ACD1-LIKE); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, 2 iron, 2 sulfur cluster binding, chlorophyllide a oxygenase [overall] activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Pheophorbide a oxygenase (InterPro:IPR013626); BEST Arabidopsis thaliana protein match is: Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain (TAIR:AT3G44880.1); Has 3440 Blast hits to 3433 proteins in 618 species: Archae - 4; Bacteria - 2370; Metazoa - 19; Fungi - 3; Plants - 426; Viruses - 0; Other Eukaryotes - 618 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative PTC52, Description = Protochlorophyllide-dependent translocon component 52, chloroplastic, PFAM = )' T '26.30' 'misc. other Ferredoxins and Rieske domain' 'niben044scf00014000ctg002_484-2113' '(at4g25650 : 194.0) Similar to ACD1. Leaves of antisense ACD1-like plants turn yellow in darkness like wild-type whereas antisense ACD1 plants remain dark after five days of dark treatment.; ACD1-like (ACD1-LIKE); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, 2 iron, 2 sulfur cluster binding, chlorophyllide a oxygenase [overall] activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Pheophorbide a oxygenase (InterPro:IPR013626); BEST Arabidopsis thaliana protein match is: Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain (TAIR:AT3G44880.1); Has 3440 Blast hits to 3433 proteins in 618 species: Archae - 4; Bacteria - 2370; Metazoa - 19; Fungi - 3; Plants - 426; Viruses - 0; Other Eukaryotes - 618 (source: NCBI BLink). & (gnl|cdd|58550 : 168.0) no description available & (reliability: 388.0) & (original description: Putative lls1, Description = Pheophorbide a oxygenase, PFAM = PF00355)' T '26.30' 'misc. other Ferredoxins and Rieske domain' 'niben101scf00327_181564-191679' '(at4g21090 : 219.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 185.0) no description available & (reliability: 426.0) & (original description: Putative fdxB, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T '26.30' 'misc. other Ferredoxins and Rieske domain' 'niben101scf00457_330670-338598' '(at1g32550 : 165.0) Encodes FdC1, a ferredoxin protein capable of alternative electron partitioning. FdC1 level increases in conditions of acceptor limitation at PSI.; 2Fe-2S ferredoxin-like superfamily protein; FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: ferredoxin 1 (TAIR:AT1G10960.1); Has 2669 Blast hits to 2667 proteins in 530 species: Archae - 94; Bacteria - 1212; Metazoa - 6; Fungi - 1; Plants - 619; Viruses - 5; Other Eukaryotes - 732 (source: NCBI BLink). & (reliability: 330.0) & (original description: Putative fdx, Description = Ferredoxin (2Fe-2S), PFAM = PF00111)' T '26.30' 'misc. other Ferredoxins and Rieske domain' 'niben101scf00480_1-4764' '(at1g71500 : 321.0) Rieske (2Fe-2S) domain-containing protein; FUNCTIONS IN: oxidoreductase activity, 2 iron, 2 sulfur cluster binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941); Has 295 Blast hits to 295 proteins in 102 species: Archae - 0; Bacteria - 166; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 642.0) & (original description: Putative Sb03g044430, Description = Putative uncharacterized protein Sb03g044430, PFAM = PF13806)' T '26.30' 'misc. other Ferredoxins and Rieske domain' 'niben101scf03046_753805-762609' '(at1g32550 : 246.0) Encodes FdC1, a ferredoxin protein capable of alternative electron partitioning. FdC1 level increases in conditions of acceptor limitation at PSI.; 2Fe-2S ferredoxin-like superfamily protein; FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: ferredoxin 1 (TAIR:AT1G10960.1); Has 2669 Blast hits to 2667 proteins in 530 species: Archae - 94; Bacteria - 1212; Metazoa - 6; Fungi - 1; Plants - 619; Viruses - 5; Other Eukaryotes - 732 (source: NCBI BLink). & (gnl|cdd|79346 : 82.7) no description available & (reliability: 492.0) & (original description: Putative fdx1, Description = Ferredoxin, PFAM = PF00111)' T '26.30' 'misc. other Ferredoxins and Rieske domain' 'niben101scf03046_756155-761614' '(at1g32550 : 163.0) Encodes FdC1, a ferredoxin protein capable of alternative electron partitioning. FdC1 level increases in conditions of acceptor limitation at PSI.; 2Fe-2S ferredoxin-like superfamily protein; FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: ferredoxin 1 (TAIR:AT1G10960.1); Has 2669 Blast hits to 2667 proteins in 530 species: Archae - 94; Bacteria - 1212; Metazoa - 6; Fungi - 1; Plants - 619; Viruses - 5; Other Eukaryotes - 732 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative fdx, Description = Ferredoxin (2Fe-2S), PFAM = PF00111)' T '26.30' 'misc. other Ferredoxins and Rieske domain' 'niben101scf05820_100333-102776' '(at4g14890 : 181.0) 2Fe-2S ferredoxin-like superfamily protein; FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: electron transport chain; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Ferredoxin [2Fe-2S], plant (InterPro:IPR010241), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: ferredoxin 3 (TAIR:AT2G27510.1); Has 5496 Blast hits to 5494 proteins in 1067 species: Archae - 103; Bacteria - 3665; Metazoa - 7; Fungi - 2; Plants - 612; Viruses - 5; Other Eukaryotes - 1102 (source: NCBI BLink). & (p14937|fer2_rapsa : 90.5) Ferredoxin, root R-B2 - Raphanus sativus (Radish) & (gnl|cdd|79346 : 81.6) no description available & (reliability: 362.0) & (original description: Putative PETF, Description = Ferredoxin, PFAM = PF00111)' T '26.30' 'misc. other Ferredoxins and Rieske domain' 'niben101scf10092_33169-50450' '(at4g21090 : 219.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 185.0) no description available & (reliability: 436.0) & (original description: Putative fdx, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T '26.30' 'misc. other Ferredoxins and Rieske domain' 'niben101scf10498_246222-255845' '(at4g21090 : 228.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38519 : 193.0) no description available & (reliability: 448.0) & (original description: Putative fdx, Description = 2Fe-2S ferredoxin, PFAM = PF00111)' T '26.30' 'misc. other Ferredoxins and Rieske domain' 'niben101scf11305_19473-27228' '(at4g25650 : 627.0) Similar to ACD1. Leaves of antisense ACD1-like plants turn yellow in darkness like wild-type whereas antisense ACD1 plants remain dark after five days of dark treatment.; ACD1-like (ACD1-LIKE); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, 2 iron, 2 sulfur cluster binding, chlorophyllide a oxygenase [overall] activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Pheophorbide a oxygenase (InterPro:IPR013626); BEST Arabidopsis thaliana protein match is: Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain (TAIR:AT3G44880.1); Has 3440 Blast hits to 3433 proteins in 618 species: Archae - 4; Bacteria - 2370; Metazoa - 19; Fungi - 3; Plants - 426; Viruses - 0; Other Eukaryotes - 618 (source: NCBI BLink). & (gnl|cdd|58550 : 212.0) no description available & (q9zwm5|cao_chlre : 84.0) Chlorophyllide a oxygenase, chloroplast precursor (EC 1.13.12.14) (Chlorophyll a oxygenase) (Chlorophyll b synthase) - Chlamydomonas reinhardtii & (reliability: 1254.0) & (original description: Putative PTC52, Description = Protochlorophyllide-dependent translocon component 52, chloroplastic, PFAM = PF00355;PF08417)' T '26.31' 'misc.zinc finger' 'niben044scf00044848ctg003_2000-11270' '(at3g51390 : 346.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G56930.1); Has 4950 Blast hits to 4948 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 2153; Fungi - 685; Plants - 832; Viruses - 0; Other Eukaryotes - 1280 (source: NCBI BLink). & (gnl|cdd|36525 : 108.0) no description available & (gnl|cdd|34870 : 81.2) no description available & (reliability: 692.0) & (original description: Putative PAT10, Description = Protein S-acyltransferase 10, PFAM = PF01529)' T '26.31' 'misc.zinc finger' 'niben101scf01497_417137-427658' '(at3g51390 : 342.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G56930.1); Has 4950 Blast hits to 4948 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 2153; Fungi - 685; Plants - 832; Viruses - 0; Other Eukaryotes - 1280 (source: NCBI BLink). & (gnl|cdd|36525 : 108.0) no description available & (gnl|cdd|34870 : 82.8) no description available & (reliability: 684.0) & (original description: Putative PAT10, Description = Protein S-acyltransferase 10, PFAM = PF01529)' T '26.31' 'misc.zinc finger' 'niben101scf06916_105734-123829' '(at3g51390 : 314.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G56930.1); Has 4950 Blast hits to 4948 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 2153; Fungi - 685; Plants - 832; Viruses - 0; Other Eukaryotes - 1280 (source: NCBI BLink). & (gnl|cdd|36525 : 110.0) no description available & (gnl|cdd|34870 : 90.1) no description available & (reliability: 628.0) & (original description: Putative PAT10, Description = Protein S-acyltransferase 10, PFAM = PF01529)' T '27' 'RNA' '' '' '27.1' 'RNA.processing' 'nbv0.3scaffold1288_1902-17360' '(at5g13570 : 427.0) Encodes DCP2 with mRNA decapping activity. DCP2 forms a mRNA decapping complex with DCP1 (At1g08370) and VCS (VARICOSE) (At3g13300). Recombinant DCP2 is enzymatically active in vitro, generating from capped mRNAs m7GDP, and 5í-phosphorylated mRNAs. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP1.; decapping 2 (DCP2); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Dcp2, box A (InterPro:IPR007722), NUDIX hydrolase domain (InterPro:IPR000086). & (gnl|cdd|38148 : 267.0) no description available & (gnl|cdd|72892 : 204.0) no description available & (reliability: 854.0) & (original description: Putative DCP2, Description = mRNA-decapping enzyme 2, PFAM = PF05026;PF00293)' T '27.1' 'RNA.processing' 'nbv0.3scaffold2909_7478-9816' '(at5g14580 : 140.0) polyribonucleotide nucleotidyltransferase, putative; FUNCTIONS IN: polyribonucleotide nucleotidyltransferase activity, 3'-5'-exoribonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: mRNA catabolic process, RNA processing; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type (InterPro:IPR015848), K Homology (InterPro:IPR004087), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Polyribonucleotide nucleotidyltransferase (InterPro:IPR012162); BEST Arabidopsis thaliana protein match is: polyribonucleotide nucleotidyltransferase, putative (TAIR:AT3G03710.1); Has 30004 Blast hits to 26962 proteins in 2901 species: Archae - 317; Bacteria - 19794; Metazoa - 489; Fungi - 141; Plants - 452; Viruses - 0; Other Eukaryotes - 8811 (source: NCBI BLink). & (gnl|cdd|36285 : 84.3) no description available & (reliability: 280.0) & (original description: Putative PNP2, Description = Polyribonucleotide nucleotidyltransferase, PFAM = PF01138)' T '27.1' 'RNA.processing' 'nbv0.3scaffold4869_45905-48295' '(gnl|cdd|28928 : 108.0) no description available & (gnl|cdd|35555 : 105.0) no description available & (at2g47330 : 92.4) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G20920.1); Has 46798 Blast hits to 46047 proteins in 3085 species: Archae - 817; Bacteria - 24489; Metazoa - 6167; Fungi - 4661; Plants - 2616; Viruses - 11; Other Eukaryotes - 8037 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative mahe, Description = ATP-dependent RNA helicase p62, PFAM = PF00270)' T '27.1' 'RNA.processing' 'nbv0.3scaffold10326_12457-24988' '(gnl|cdd|36140 : 637.0) no description available & (at1g26370 : 503.0) RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), ATPase, AAA+ type, core (InterPro:IPR003593), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 9899 Blast hits to 9180 proteins in 1561 species: Archae - 2; Bacteria - 3369; Metazoa - 2309; Fungi - 1230; Plants - 848; Viruses - 465; Other Eukaryotes - 1676 (source: NCBI BLink). & (gnl|cdd|31829 : 447.0) no description available & (reliability: 916.0) & (original description: Putative splh1, Description = DEAH-box nuclear pre-mRNA splicing factor, PFAM = PF04408;PF00271;PF07717)' T '27.1' 'RNA.processing' 'nbv0.3scaffold12593_27047-31953' '(at1g09760 : 280.0) U2 small nuclear ribonucleoprotein A (U2A'); INVOLVED IN: nuclear mRNA splicing, via spliceosome, response to cold; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U2A'/phosphoprotein 32 family A, C-terminal (InterPro:IPR003603); Has 8109 Blast hits to 6297 proteins in 450 species: Archae - 0; Bacteria - 3635; Metazoa - 3194; Fungi - 303; Plants - 219; Viruses - 2; Other Eukaryotes - 756 (source: NCBI BLink). & (gnl|cdd|36857 : 249.0) no description available & (reliability: 560.0) & (original description: Putative SNRPA1, Description = U2 small nuclear ribonucleoprotein A', PFAM = PF14580)' T '27.1' 'RNA.processing' 'nbv0.3scaffold14754_1-7389' '(at5g63120 : 681.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G55150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35552 : 583.0) no description available & (p46942|db10_nicsy : 418.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|30859 : 399.0) no description available & (reliability: 1362.0) & (original description: Putative RH20, Description = DEAD-box ATP-dependent RNA helicase 20, PFAM = PF00270;PF00271)' T '27.1' 'RNA.processing' 'nbv0.3scaffold15497_25905-32687' '(at3g17040 : 739.0) It is a RNA tetratricopeptide repeat-containing protein required for normal processing of transcripts from the polycistronic chloroplast psbB-psbT-psbH-petB-petD operon coding for proteins of the photosystem II and cytochrome b6/f complexes. Localizes to the chloroplast membrane. Involved in regulating plastidial gene expression and biogenesis.; high chlorophyll fluorescent 107 (HCF107); FUNCTIONS IN: binding; INVOLVED IN: plastid organization, RNA processing, regulation of translation; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: pre-mRNA splicing factor-related (TAIR:AT4G03430.1). & (q9fns4|mbb1_chlre : 260.0) PsbB mRNA maturation factor Mbb1, chloroplast precursor - Chlamydomonas reinhardtii & (gnl|cdd|35716 : 99.3) no description available & (reliability: 1478.0) & (original description: Putative HCF107, Description = Protein high chlorophyll fluorescent 107, PFAM = )' T '27.1' 'RNA.processing' 'nbv0.3scaffold15784_33944-38878' '(at3g52210 : 355.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mRNA capping; LOCATED IN: cellular_component unknown; EXPRESSED IN: synergid; CONTAINS InterPro DOMAIN/s: mRNA capping enzyme, large subunit (InterPro:IPR004971); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT3G20650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6k833|mces2_orysa : 353.0) mRNA cap guanine-N7 methyltransferase 2 (EC 2.1.1.56) (mRNA (guanine-N(7)-)-methyltransferase 2) (mRNA cap methyltransferase 2) - Oryza sativa (Rice) & (gnl|cdd|37186 : 133.0) no description available & (gnl|cdd|66934 : 121.0) no description available & (reliability: 710.0) & (original description: Putative At3g52210, Description = S-adenosyl-L-methionine-dependent methyltransferase superfamily protein, PFAM = PF03291)' T '27.1' 'RNA.processing' 'nbv0.3scaffold16102_19990-32123' '(at3g13300 : 1199.0) Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development.; VARICOSE (VCS); FUNCTIONS IN: protein homodimerization activity, nucleotide binding; INVOLVED IN: mRNA catabolic process, deadenylation-independent decapping of nuclear-transcribed mRNA, leaf morphogenesis; LOCATED IN: cytosol, nucleus, cytoplasmic mRNA processing body; EXPRESSED IN: whole plant, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: varicose-related (TAIR:AT3G13290.1); Has 885 Blast hits to 799 proteins in 264 species: Archae - 2; Bacteria - 218; Metazoa - 230; Fungi - 185; Plants - 114; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|37127 : 833.0) no description available & (reliability: 2398.0) & (original description: Putative EDC4, Description = Enhancer of mRNA-decapping protein 4, PFAM = PF16529)' T '27.1' 'RNA.processing' 'nbv0.3scaffold16654_5350-9666' '(at2g33320 : 228.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative At1g04540, Description = BnaA09g00140D protein, PFAM = PF00168)' T '27.1' 'RNA.processing' 'nbv0.3scaffold22054_5104-31171' '(at3g03710 : 656.0) Encodes a chloroplast polynucleotide phosphorylase (PNPase). Involved in response to phosphorus (P) starvation. Mutants impaired in the expression of this gene have been selected through their resistance to fosmidomycin, a strong inhibitor of DXR, an enzyme of the methylerythritol-dependent IPP biosynthesis pathway. The pathway enzymes were upregulated in the mutant seedlings.; resistant to inhibition with FSM 10 (RIF10); FUNCTIONS IN: polyribonucleotide nucleotidyltransferase activity, 3'-5'-exoribonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: chlorophyll biosynthetic process, cellular response to phosphate starvation, xanthophyll biosynthetic process, carotene biosynthetic process, negative regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type (InterPro:IPR015848), K Homology (InterPro:IPR004087), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), K Homology, type 1 (InterPro:IPR004088), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Polyribonucleotide nucleotidyltransferase (InterPro:IPR012162); BEST Arabidopsis thaliana protein match is: polyribonucleotide nucleotidyltransferase, putative (TAIR:AT5G14580.1); Has 29137 Blast hits to 25785 proteins in 2865 species: Archae - 377; Bacteria - 19207; Metazoa - 333; Fungi - 67; Plants - 272; Viruses - 0; Other Eukaryotes - 8881 (source: NCBI BLink). & (gnl|cdd|83994 : 503.0) no description available & (gnl|cdd|36285 : 448.0) no description available & (reliability: 1312.0) & (original description: Putative pnp, Description = Polynucleotide phosphorylase, PFAM = PF03726;PF01138;PF00013)' T '27.1' 'RNA.processing' 'nbv0.3scaffold25116_7001-14059' '(at3g52120 : 290.0) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SWAP/Surp (InterPro:IPR000061), D111/G-patch (InterPro:IPR000467); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36183 : 234.0) no description available & (reliability: 580.0) & (original description: Putative SF4, Description = Splicing factor 4, PFAM = PF01585;PF01805)' T '27.1' 'RNA.processing' 'nbv0.3scaffold26326_590-8341' '(at1g43190 : 646.0) polypyrimidine tract-binding protein 3 (PTB3); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: regulation of RNA splicing, regulation of translation; LOCATED IN: nucleus, cytoplasmic mRNA processing body, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), HnRNP-L/PTB/hephaestus splicing factor (InterPro:IPR006536), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: polypyrimidine tract-binding protein 1 (TAIR:AT3G01150.1); Has 2368 Blast hits to 1946 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 1467; Fungi - 40; Plants - 582; Viruses - 0; Other Eukaryotes - 279 (source: NCBI BLink). & (gnl|cdd|36404 : 410.0) no description available & (reliability: 1292.0) & (original description: Putative ptb, Description = Polypyrimidine track-binding protein homologue, PFAM = PF00076;PF00076;PF13893)' T '27.1' 'RNA.processing' 'nbv0.3scaffold29224_6090-14835' '(at2g23350 : 660.0) polyadenylate-binding protein, putative / PABP, putative.Member of the Class II family of PABP proteins. Highly and ubiquitously expressed.; poly(A) binding protein 4 (PAB4); FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 2 (TAIR:AT4G34110.1); Has 520413 Blast hits to 486687 proteins in 21592 species: Archae - 10501; Bacteria - 294432; Metazoa - 110769; Fungi - 17969; Plants - 36260; Viruses - 34479; Other Eukaryotes - 16003 (source: NCBI BLink). & (gnl|cdd|35345 : 424.0) no description available & (gnl|cdd|64519 : 99.6) no description available & (p19683|roc4_nicsy : 82.0) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 1320.0) & (original description: Putative PAB8, Description = Polyadenylate-binding protein 8, PFAM = PF00658;PF00076;PF00076;PF00076;PF00076;PF00076)' T '27.1' 'RNA.processing' 'nbv0.3scaffold29763_3879-10119' '(at4g02840 : 162.0) Small nuclear ribonucleoprotein family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: nucleus, small nucleolar ribonucleoprotein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT3G07590.2). & (gnl|cdd|38638 : 136.0) no description available & (gnl|cdd|29711 : 130.0) no description available & (reliability: 324.0) & (original description: Putative SNRPD1, Description = Small nuclear ribonucleoprotein Sm D1, PFAM = PF01423)' T '27.1' 'RNA.processing' 'nbv0.3scaffold30981_5220-8088' '(at5g01290 : 184.0) mRNA capping enzyme family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, protein tyrosine/serine/threonine phosphatase activity, mRNA guanylyltransferase activity, polynucleotide 5'-phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, mRNA processing, mRNA capping, dephosphorylation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme, C-terminal (InterPro:IPR013846); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT3G09100.2); Has 888 Blast hits to 860 proteins in 246 species: Archae - 0; Bacteria - 2; Metazoa - 276; Fungi - 241; Plants - 79; Viruses - 71; Other Eukaryotes - 219 (source: NCBI BLink). & (gnl|cdd|37597 : 160.0) no description available & (reliability: 368.0) & (original description: Putative pco130460, Description = mRNA-capping enzyme, PFAM = PF00782)' T '27.1' 'RNA.processing' 'nbv0.3scaffold31967_14372-23883' '(at1g51310 : 681.0) transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases; FUNCTIONS IN: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity, transferase activity; INVOLVED IN: tRNA processing, RNA processing; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), tRNA-specific 2-thiouridylase (InterPro:IPR004506); Has 8544 Blast hits to 8538 proteins in 2600 species: Archae - 0; Bacteria - 5626; Metazoa - 134; Fungi - 60; Plants - 58; Viruses - 0; Other Eukaryotes - 2666 (source: NCBI BLink). & (gnl|cdd|38016 : 465.0) no description available & (gnl|cdd|66710 : 436.0) no description available & (reliability: 1362.0) & (original description: Putative mnmA, Description = tRNA-specific 2-thiouridylase MnmA, PFAM = PF03054)' T '27.1' 'RNA.processing' 'nbv0.3scaffold34338_13585-17594' '(at2g33320 : 221.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative At1g04540, Description = BnaA09g00140D protein, PFAM = PF00168)' T '27.1' 'RNA.processing' 'nbv0.3scaffold36760_8261-12525' '(at2g33320 : 224.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative At1g04540, Description = Putative ankyrin repeat-containing protein kinase A-like, PFAM = PF00168)' T '27.1' 'RNA.processing' 'nbv0.3scaffold36949_2878-23975' '(at3g05040 : 1387.0) Encodes member of importin/exportin family. Involved in timing of shoot maturation. Involved in miRNA transport. Mutants flower early and have small, curled leaves and reduced abundance of certain miRNA species.; HASTY (HST); CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); Has 520 Blast hits to 417 proteins in 141 species: Archae - 0; Bacteria - 0; Metazoa - 205; Fungi - 183; Plants - 102; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|37231 : 132.0) no description available & (gnl|cdd|87516 : 81.8) no description available & (reliability: 2774.0) & (original description: Putative HST1, Description = Protein HASTY 1, PFAM = PF08389)' T '27.1' 'RNA.processing' 'nbv0.3scaffold57443_19713-22917' '(at4g27000 : 211.0) ATRBP45C; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 400.0) & (original description: Putative dbdA, Description = Polyadenylate-binding protein RBP47B, PFAM = PF00076;PF00076)' T '27.1' 'RNA.processing' 'nbv0.3scaffold65091_1-2842' '(at1g10580 : 850.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G54520.1); Has 62674 Blast hits to 30927 proteins in 942 species: Archae - 75; Bacteria - 8018; Metazoa - 23835; Fungi - 13551; Plants - 7464; Viruses - 27; Other Eukaryotes - 9704 (source: NCBI BLink). & (gnl|cdd|35503 : 577.0) no description available & (gnl|cdd|29257 : 207.0) no description available & (reliability: 1700.0) & (original description: Putative CDC40, Description = Pre-mRNA-processing factor 17, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '27.1' 'RNA.processing' 'nbv0.3scaffold74316_1-8255' '(at3g13300 : 660.0) Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development.; VARICOSE (VCS); FUNCTIONS IN: protein homodimerization activity, nucleotide binding; INVOLVED IN: mRNA catabolic process, deadenylation-independent decapping of nuclear-transcribed mRNA, leaf morphogenesis; LOCATED IN: cytosol, nucleus, cytoplasmic mRNA processing body; EXPRESSED IN: whole plant, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: varicose-related (TAIR:AT3G13290.1); Has 885 Blast hits to 799 proteins in 264 species: Archae - 2; Bacteria - 218; Metazoa - 230; Fungi - 185; Plants - 114; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|37127 : 472.0) no description available & (reliability: 1320.0) & (original description: Putative EDC4, Description = Varicose-related protein, PFAM = PF16529)' T '27.1' 'RNA.processing' 'nbv0.3scaffold81907_483-4221' '(at4g15420 : 669.0) Ubiquitin fusion degradation UFD1 family protein; FUNCTIONS IN: peptidase activity, zinc ion binding; INVOLVED IN: proteolysis, ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Peptidase, C-terminal, archaeal/bacterial (InterPro:IPR007280), Ubiquitin fusion degradation protein UFD1 (InterPro:IPR004854); BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT2G29070.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37027 : 203.0) no description available & (gnl|cdd|66804 : 174.0) no description available & (reliability: 1338.0) & (original description: Putative At4g15420, Description = AT4g15420/dl3755w, PFAM = PF03152)' T '27.1' 'RNA.processing' 'nbv0.3scaffold95616_924-4608' '(at3g46790 : 880.0) Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-H subfamily) with 9 pentatricopeptide (PPR) repeats. The protein is involved the intergenic processing of chloroplast RNA between rps7 and ndhB, which is essential for ndhB translation.; CHLORORESPIRATORY REDUCTION 2 (CRR2); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 36401 Blast hits to 13536 proteins in 261 species: Archae - 0; Bacteria - 8; Metazoa - 92; Fungi - 72; Plants - 35786; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink). & (q76c99|rf1_orysa : 85.5) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1760.0) & (original description: Putative crr2, Description = Chlororespiratory reduction 2, PFAM = PF14432;PF13041;PF13041;PF01535;PF01535)' T '27.1' 'RNA.processing' 'nbv0.5scaffold86_180027-186809' '(at3g17040 : 721.0) It is a RNA tetratricopeptide repeat-containing protein required for normal processing of transcripts from the polycistronic chloroplast psbB-psbT-psbH-petB-petD operon coding for proteins of the photosystem II and cytochrome b6/f complexes. Localizes to the chloroplast membrane. Involved in regulating plastidial gene expression and biogenesis.; high chlorophyll fluorescent 107 (HCF107); FUNCTIONS IN: binding; INVOLVED IN: plastid organization, RNA processing, regulation of translation; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: pre-mRNA splicing factor-related (TAIR:AT4G03430.1). & (q9fns4|mbb1_chlre : 259.0) PsbB mRNA maturation factor Mbb1, chloroplast precursor - Chlamydomonas reinhardtii & (gnl|cdd|35716 : 99.3) no description available & (reliability: 1442.0) & (original description: Putative HCF107, Description = Protein high chlorophyll fluorescent 107, PFAM = )' T '27.1' 'RNA.processing' 'nbv0.5scaffold112_68317-119599' '(at3g03710 : 1137.0) Encodes a chloroplast polynucleotide phosphorylase (PNPase). Involved in response to phosphorus (P) starvation. Mutants impaired in the expression of this gene have been selected through their resistance to fosmidomycin, a strong inhibitor of DXR, an enzyme of the methylerythritol-dependent IPP biosynthesis pathway. The pathway enzymes were upregulated in the mutant seedlings.; resistant to inhibition with FSM 10 (RIF10); FUNCTIONS IN: polyribonucleotide nucleotidyltransferase activity, 3'-5'-exoribonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: chlorophyll biosynthetic process, cellular response to phosphate starvation, xanthophyll biosynthetic process, carotene biosynthetic process, negative regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type (InterPro:IPR015848), K Homology (InterPro:IPR004087), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), K Homology, type 1 (InterPro:IPR004088), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Polyribonucleotide nucleotidyltransferase (InterPro:IPR012162); BEST Arabidopsis thaliana protein match is: polyribonucleotide nucleotidyltransferase, putative (TAIR:AT5G14580.1); Has 29137 Blast hits to 25785 proteins in 2865 species: Archae - 377; Bacteria - 19207; Metazoa - 333; Fungi - 67; Plants - 272; Viruses - 0; Other Eukaryotes - 8881 (source: NCBI BLink). & (gnl|cdd|83994 : 862.0) no description available & (gnl|cdd|36285 : 837.0) no description available & (reliability: 2274.0) & (original description: Putative pnp, Description = Polyribonucleotide nucleotidyltransferase, PFAM = PF00575;PF01138;PF01138;PF03725;PF00013)' T '27.1' 'RNA.processing' 'nbv0.5scaffold128_122223-127329' '(at5g55100 : 200.0) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147), SWAP/Surp (InterPro:IPR000061); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37058 : 149.0) no description available & (reliability: 400.0) & (original description: Putative PGSC0003DMG400014387, Description = BnaC02g13350D protein, PFAM = PF01805;PF01805)' T '27.1' 'RNA.processing' 'nbv0.5scaffold283_877439-880212' '(at1g11650 : 146.0) RBP45B; FUNCTIONS IN: RNA binding; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 29660 Blast hits to 18296 proteins in 811 species: Archae - 14; Bacteria - 2273; Metazoa - 15265; Fungi - 3531; Plants - 5870; Viruses - 0; Other Eukaryotes - 2707 (source: NCBI BLink). & (gnl|cdd|35370 : 84.3) no description available & (reliability: 264.0) & (original description: Putative nbp1, Description = Polyadenylate-binding protein RBP47B, PFAM = PF00076)' T '27.1' 'RNA.processing' 'nbv0.5scaffold372_302009-315666' '(at2g17580 : 251.0) Polynucleotide adenylyltransferase family protein; FUNCTIONS IN: RNA binding, nucleotidyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Poly A polymerase, head domain (InterPro:IPR002646); BEST Arabidopsis thaliana protein match is: Polynucleotide adenylyltransferase family protein (TAIR:AT1G28090.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37370 : 115.0) no description available & (reliability: 502.0) & (original description: Putative At2g17580, Description = Putative poly(A) polymerase, PFAM = PF12627)' T '27.1' 'RNA.processing' 'nbv0.5scaffold505_71884-88111' '(at1g59760 : 1207.0) RNA helicase, ATP-dependent, SK12/DOB1 protein; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT2G06990.1); Has 9909 Blast hits to 8438 proteins in 1290 species: Archae - 828; Bacteria - 3072; Metazoa - 1170; Fungi - 1231; Plants - 476; Viruses - 32; Other Eukaryotes - 3100 (source: NCBI BLink). & (gnl|cdd|36166 : 1017.0) no description available & (gnl|cdd|34219 : 683.0) no description available & (reliability: 2414.0) & (original description: Putative MTR4, Description = DExH-box ATP-dependent RNA helicase DExH9, PFAM = PF08148;PF00270;PF00271;PF13234)' T '27.1' 'RNA.processing' 'nbv0.5scaffold855_19486-26151' '(at3g13300 : 132.0) Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development.; VARICOSE (VCS); FUNCTIONS IN: protein homodimerization activity, nucleotide binding; INVOLVED IN: mRNA catabolic process, deadenylation-independent decapping of nuclear-transcribed mRNA, leaf morphogenesis; LOCATED IN: cytosol, nucleus, cytoplasmic mRNA processing body; EXPRESSED IN: whole plant, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: varicose-related (TAIR:AT3G13290.1); Has 885 Blast hits to 799 proteins in 264 species: Archae - 2; Bacteria - 218; Metazoa - 230; Fungi - 185; Plants - 114; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|37127 : 115.0) no description available & (reliability: 264.0) & (original description: Putative EDC4, Description = Enhancer of mRNA-decapping protein 4, PFAM = PF03478)' T '27.1' 'RNA.processing' 'nbv0.5scaffold873_243631-256171' '(gnl|cdd|36140 : 656.0) no description available & (at1g26370 : 500.0) RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), ATPase, AAA+ type, core (InterPro:IPR003593), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 9899 Blast hits to 9180 proteins in 1561 species: Archae - 2; Bacteria - 3369; Metazoa - 2309; Fungi - 1230; Plants - 848; Viruses - 465; Other Eukaryotes - 1676 (source: NCBI BLink). & (gnl|cdd|31829 : 463.0) no description available & (reliability: 952.0) & (original description: Putative splh1, Description = DEAH-box nuclear pre-mRNA splicing factor, PFAM = PF07717;PF04408;PF00271)' T '27.1' 'RNA.processing' 'nbv0.5scaffold997_441740-444177' '(gnl|cdd|37785 : 122.0) no description available & (at1g60170 : 117.0) embryo defective 1220 (emb1220); CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOSIC (InterPro:IPR012976), Prp31 C-terminal (InterPro:IPR019175); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70400.1); Has 1596 Blast hits to 1590 proteins in 356 species: Archae - 207; Bacteria - 2; Metazoa - 385; Fungi - 430; Plants - 224; Viruses - 0; Other Eukaryotes - 348 (source: NCBI BLink). & (gnl|cdd|85685 : 99.5) no description available & (reliability: 234.0) & (original description: Putative emb1220, Description = U4/U6 small nuclear ribonucleoprotein Prp31, PFAM = PF01798)' T '27.1' 'RNA.processing' 'nbv0.5scaffold1108_284775-290125' '(at2g41500 : 540.0) Encodes LACHESIS (LIS), a protein with seven WD40 repeats. LIS is homologous to the yeast splicing factor PRP4 which is associated with the U4/U6 complex of the spliceosome. LIS is involved in a mechanism that prevents accessory cells from adopting gametic cell fate: lis mutant forms supernumerary egg cells.; LACHESIS (LIS); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), Pre-mRNA processing factor 4 (PRP4) like (InterPro:IPR014906), WD40 repeat (InterPro:IPR001680), Splicing factor motif (InterPro:IPR003648), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G05720.1); Has 96331 Blast hits to 36444 proteins in 930 species: Archae - 78; Bacteria - 11869; Metazoa - 38307; Fungi - 21059; Plants - 12275; Viruses - 15; Other Eukaryotes - 12728 (source: NCBI BLink). & (gnl|cdd|35493 : 525.0) no description available & (gnl|cdd|29257 : 250.0) no description available & (p93107|pf20_chlre : 130.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1080.0) & (original description: Putative prpf4, Description = U4/U6 small nuclear ribonucleoprotein Prp4, PFAM = PF08799;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '27.1' 'RNA.processing' 'nbv0.5scaffold1328_188239-195929' '(at1g01860 : 405.0) dimethyladenosine transferase; PALEFACE 1 (PFC1); FUNCTIONS IN: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity; INVOLVED IN: response to cold; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA adenine methylase transferase, N-terminal (InterPro:IPR020598), Ribosomal RNA adenine methylase transferase, conserved site (InterPro:IPR020596), Ribosomal RNA adenine methylase transferase (InterPro:IPR001737); BEST Arabidopsis thaliana protein match is: Ribosomal RNA adenine dimethylase family protein (TAIR:AT5G66360.2); Has 9632 Blast hits to 9628 proteins in 3006 species: Archae - 228; Bacteria - 6144; Metazoa - 264; Fungi - 142; Plants - 116; Viruses - 0; Other Eukaryotes - 2738 (source: NCBI BLink). & (gnl|cdd|80598 : 222.0) no description available & (gnl|cdd|36038 : 219.0) no description available & (reliability: 810.0) & (original description: Putative PFC1, Description = Ribosomal RNA small subunit methyltransferase, chloroplastic, PFAM = PF00398)' T '27.1' 'RNA.processing' 'nbv0.5scaffold1381_159875-163062' '(at2g33320 : 172.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative At1g04540, Description = BnaA09g00140D protein, PFAM = PF00168)' T '27.1' 'RNA.processing' 'nbv0.5scaffold1829_1-3406' '(at3g46790 : 891.0) Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-H subfamily) with 9 pentatricopeptide (PPR) repeats. The protein is involved the intergenic processing of chloroplast RNA between rps7 and ndhB, which is essential for ndhB translation.; CHLORORESPIRATORY REDUCTION 2 (CRR2); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 36401 Blast hits to 13536 proteins in 261 species: Archae - 0; Bacteria - 8; Metazoa - 92; Fungi - 72; Plants - 35786; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink). & (q76c99|rf1_orysa : 86.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1782.0) & (original description: Putative crr2, Description = Chlororespiratory reduction 2, PFAM = PF01535;PF01535;PF14432;PF13041;PF13041)' T '27.1' 'RNA.processing' 'nbv0.5scaffold2020_259152-313571' '(at5g44500 : 171.0) Small nuclear ribonucleoprotein family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: nucleolus, nucleus, small nucleolar ribonucleoprotein complex; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Small ribonucleoprotein associated, SmB/SmN (InterPro:IPR017131), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: small nuclear ribonucleoprotein associated protein B (TAIR:AT4G20440.4); Has 60118 Blast hits to 30363 proteins in 1233 species: Archae - 62; Bacteria - 7735; Metazoa - 31237; Fungi - 6515; Plants - 7441; Viruses - 1395; Other Eukaryotes - 5733 (source: NCBI BLink). & (gnl|cdd|29704 : 135.0) no description available & (gnl|cdd|38378 : 131.0) no description available & (reliability: 342.0) & (original description: Putative SmB, Description = Small nuclear ribonucleoprotein-associated protein B, PFAM = PF01423)' T '27.1' 'RNA.processing' 'nbv0.5scaffold2088_14868-17901' '(at4g14790 : 207.0) encodes a nuclear-encoded DExH box RNA helicase, which is localized to mitochondria and whose in vitro ATPase activity is stimulated with mitochondrial RNA.; ATSUV3; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DNA/RNA helicase, C-terminal (InterPro:IPR001650); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial, putative (TAIR:AT5G39840.1); Has 3666 Blast hits to 3643 proteins in 672 species: Archae - 20; Bacteria - 977; Metazoa - 276; Fungi - 353; Plants - 117; Viruses - 18; Other Eukaryotes - 1905 (source: NCBI BLink). & (gnl|cdd|36171 : 173.0) no description available & (reliability: 414.0) & (original description: Putative dnc, Description = ATP-dependent RNA helicase SUPV3L1, mitochondrial, PFAM = )' T '27.1' 'RNA.processing' 'nbv0.5scaffold2241_185102-197344' '(at5g23690 : 605.0) Polynucleotide adenylyltransferase family protein; FUNCTIONS IN: RNA binding, nucleotidyltransferase activity; INVOLVED IN: RNA processing; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Poly A polymerase, head domain (InterPro:IPR002646); BEST Arabidopsis thaliana protein match is: polynucleotide adenylyltransferase family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G48830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37370 : 373.0) no description available & (gnl|cdd|30962 : 195.0) no description available & (reliability: 1210.0) & (original description: Putative pcnB, Description = Putative poly(A) polymerase, PFAM = PF12627;PF01743)' T '27.1' 'RNA.processing' 'nbv0.5scaffold2264_332007-341898' '(at1g08370 : 254.0) Encodes DCP1 involved in mRNA decapping. DCP1 forms a mRNA decapping complex with DCP2 (At5g13570) and VCS (VARICOSE) (At3g13300). However, unlike DCP2, DCP1 itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP2.; decapping 1 (DCP1); CONTAINS InterPro DOMAIN/s: Dcp1-like decapping (InterPro:IPR010334); Has 3561 Blast hits to 2917 proteins in 377 species: Archae - 4; Bacteria - 239; Metazoa - 1310; Fungi - 561; Plants - 741; Viruses - 142; Other Eukaryotes - 564 (source: NCBI BLink). & (gnl|cdd|69574 : 172.0) no description available & (gnl|cdd|38079 : 161.0) no description available & (reliability: 508.0) & (original description: Putative At1g08370, Description = mRNA-decapping enzyme-like protein, PFAM = PF06058)' T '27.1' 'RNA.processing' 'nbv0.5scaffold2291_127507-131833' '(at2g33320 : 219.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative At1g04540, Description = Putative ankyrin repeat-containing protein kinase A-like, PFAM = PF00168)' T '27.1' 'RNA.processing' 'nbv0.5scaffold3073_103282-118578' '(gnl|cdd|35552 : 355.0) no description available & (gnl|cdd|30859 : 342.0) no description available & (at1g55150 : 273.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 234.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 532.0) & (original description: Putative P68, Description = DEAD box protein P68, PFAM = PF00271;PF00270)' T '27.1' 'RNA.processing' 'nbv0.5scaffold4004_31826-41918' '(at1g51310 : 716.0) transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases; FUNCTIONS IN: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity, transferase activity; INVOLVED IN: tRNA processing, RNA processing; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), tRNA-specific 2-thiouridylase (InterPro:IPR004506); Has 8544 Blast hits to 8538 proteins in 2600 species: Archae - 0; Bacteria - 5626; Metazoa - 134; Fungi - 60; Plants - 58; Viruses - 0; Other Eukaryotes - 2666 (source: NCBI BLink). & (gnl|cdd|38016 : 467.0) no description available & (gnl|cdd|66710 : 436.0) no description available & (reliability: 1432.0) & (original description: Putative mnmA, Description = tRNA-specific 2-thiouridylase MnmA, PFAM = PF03054)' T '27.1' 'RNA.processing' 'nbv0.5scaffold10097_5483-9464' '(at3g46790 : 880.0) Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-H subfamily) with 9 pentatricopeptide (PPR) repeats. The protein is involved the intergenic processing of chloroplast RNA between rps7 and ndhB, which is essential for ndhB translation.; CHLORORESPIRATORY REDUCTION 2 (CRR2); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 36401 Blast hits to 13536 proteins in 261 species: Archae - 0; Bacteria - 8; Metazoa - 92; Fungi - 72; Plants - 35786; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink). & (q76c99|rf1_orysa : 84.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1760.0) & (original description: Putative crr2, Description = Chlororespiratory reduction 2, PFAM = PF01535;PF01535;PF13041;PF13041;PF14432)' T '27.1' 'RNA.processing' 'nbv0.5scaffold10905_723-3113' '(gnl|cdd|28928 : 107.0) no description available & (gnl|cdd|35555 : 105.0) no description available & (at2g47330 : 94.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G20920.1); Has 46798 Blast hits to 46047 proteins in 3085 species: Archae - 817; Bacteria - 24489; Metazoa - 6167; Fungi - 4661; Plants - 2616; Viruses - 11; Other Eukaryotes - 8037 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative p62, Description = ATP-dependent RNA helicase p62, PFAM = PF00270)' T '27.1' 'RNA.processing' 'niben044scf00000077ctg008_598-3624' '(at4g14790 : 207.0) encodes a nuclear-encoded DExH box RNA helicase, which is localized to mitochondria and whose in vitro ATPase activity is stimulated with mitochondrial RNA.; ATSUV3; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DNA/RNA helicase, C-terminal (InterPro:IPR001650); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial, putative (TAIR:AT5G39840.1); Has 3666 Blast hits to 3643 proteins in 672 species: Archae - 20; Bacteria - 977; Metazoa - 276; Fungi - 353; Plants - 117; Viruses - 18; Other Eukaryotes - 1905 (source: NCBI BLink). & (gnl|cdd|36171 : 174.0) no description available & (reliability: 414.0) & (original description: Putative dnc, Description = ATP-dependent RNA helicase SUPV3L1, mitochondrial, PFAM = )' T '27.1' 'RNA.processing' 'niben044scf00000825ctg000_1662-9207' '(at4g03120 : 93.2) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, U1-C type (InterPro:IPR013085), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type matrin (InterPro:IPR000690); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87045 : 81.9) no description available & (gnl|cdd|38664 : 80.5) no description available & (reliability: 186.4) & (original description: Putative snrpC, Description = U1 small nuclear ribonucleoprotein C, PFAM = PF06220)' T '27.1' 'RNA.processing' 'niben044scf00001406ctg011_2379-6514' '(at4g15420 : 650.0) Ubiquitin fusion degradation UFD1 family protein; FUNCTIONS IN: peptidase activity, zinc ion binding; INVOLVED IN: proteolysis, ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Peptidase, C-terminal, archaeal/bacterial (InterPro:IPR007280), Ubiquitin fusion degradation protein UFD1 (InterPro:IPR004854); BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT2G29070.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37027 : 194.0) no description available & (gnl|cdd|66804 : 164.0) no description available & (reliability: 1300.0) & (original description: Putative At4g15420, Description = AT4g15420/dl3755w, PFAM = PF03152)' T '27.1' 'RNA.processing' 'niben044scf00002719ctg013_1-2013' '(at1g43190 : 348.0) polypyrimidine tract-binding protein 3 (PTB3); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: regulation of RNA splicing, regulation of translation; LOCATED IN: nucleus, cytoplasmic mRNA processing body, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), HnRNP-L/PTB/hephaestus splicing factor (InterPro:IPR006536), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: polypyrimidine tract-binding protein 1 (TAIR:AT3G01150.1); Has 2368 Blast hits to 1946 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 1467; Fungi - 40; Plants - 582; Viruses - 0; Other Eukaryotes - 279 (source: NCBI BLink). & (gnl|cdd|36404 : 226.0) no description available & (reliability: 696.0) & (original description: Putative ptb, Description = Polypyrimidine tract-binding-like protein, PFAM = PF13893;PF00076)' T '27.1' 'RNA.processing' 'niben044scf00006582ctg024_828-6997' '(at1g80670 : 422.0) This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase; Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G15850.1); Has 28564 Blast hits to 16034 proteins in 648 species: Archae - 58; Bacteria - 6462; Metazoa - 9394; Fungi - 6178; Plants - 3041; Viruses - 0; Other Eukaryotes - 3431 (source: NCBI BLink). & (gnl|cdd|35866 : 355.0) no description available & (gnl|cdd|29257 : 97.4) no description available & (reliability: 844.0) & (original description: Putative rae1, Description = mRNA export factor, PFAM = PF00400;PF00400;PF00400)' T '27.1' 'RNA.processing' 'niben044scf00006644ctg005_5549-10538' '(at5g22100 : 477.0) RNA cyclase family protein; FUNCTIONS IN: RNA-3'-phosphate cyclase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA 3'-terminal phosphate cyclase-like, conserved site (InterPro:IPR020719), RNA 3'-terminal phosphate cyclase-like (InterPro:IPR000228), RNA 3'-terminal phosphate cyclase, insert domain (InterPro:IPR013796), RNA 3'-terminal phosphate cyclase-like, eukaryotic (InterPro:IPR016443), RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (InterPro:IPR013792); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30125 : 405.0) no description available & (gnl|cdd|39183 : 344.0) no description available & (reliability: 954.0) & (original description: Putative rcl1, Description = Putative RNA 3'-terminal phosphate cyclase-like protein, PFAM = PF01137;PF05189)' T '27.1' 'RNA.processing' 'niben044scf00007575ctg001_16479-19434' '(at1g59760 : 322.0) RNA helicase, ATP-dependent, SK12/DOB1 protein; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT2G06990.1); Has 9909 Blast hits to 8438 proteins in 1290 species: Archae - 828; Bacteria - 3072; Metazoa - 1170; Fungi - 1231; Plants - 476; Viruses - 32; Other Eukaryotes - 3100 (source: NCBI BLink). & (gnl|cdd|36166 : 300.0) no description available & (gnl|cdd|87448 : 202.0) no description available & (reliability: 644.0) & (original description: Putative mtr4, Description = Superkiller viralicidic activity 2-like 2, PFAM = PF08148;PF13234)' T '27.1' 'RNA.processing' 'niben044scf00007990ctg010_1-2012' '(at1g03530 : 179.0) nuclear assembly factor 1 (NAF1); FUNCTIONS IN: snoRNA binding, pseudouridine synthase activity; INVOLVED IN: biological_process unknown; LOCATED IN: box H/ACA snoRNP complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 (InterPro:IPR007504); Has 55446 Blast hits to 31211 proteins in 1683 species: Archae - 434; Bacteria - 10062; Metazoa - 16821; Fungi - 8873; Plants - 3938; Viruses - 821; Other Eukaryotes - 14497 (source: NCBI BLink). & (gnl|cdd|69038 : 143.0) no description available & (gnl|cdd|37447 : 135.0) no description available & (reliability: 358.0) & (original description: Putative NAF1, Description = H/ACA ribonucleoprotein complex non-core subunit NAF1, PFAM = PF04410)' T '27.1' 'RNA.processing' 'niben044scf00008684ctg013_546-4136' '(at4g28450 : 250.0) This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase; nucleotide binding;protein binding; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Sof1-like protein (InterPro:IPR007287), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 37337 Blast hits to 21127 proteins in 676 species: Archae - 38; Bacteria - 5948; Metazoa - 14528; Fungi - 7710; Plants - 4379; Viruses - 0; Other Eukaryotes - 4734 (source: NCBI BLink). & (gnl|cdd|35489 : 214.0) no description available & (reliability: 500.0) & (original description: Putative sof1, Description = DDB1-and CUL4-associated factor 13, PFAM = PF00400;PF00400;PF04158)' T '27.1' 'RNA.processing' 'niben044scf00008827ctg002_6070-10661' '(at1g14650 : 570.0) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: RNA processing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SWAP/Surp (InterPro:IPR000061), Ubiquitin (InterPro:IPR000626), Pre-mRNA splicing factor PRP21 like protein (InterPro:IPR022030), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: SWAP (Suppressor-of-White-APricot)/surp domain-containing protein (TAIR:AT1G14640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35231 : 140.0) no description available & (gnl|cdd|29202 : 100.0) no description available & (reliability: 1140.0) & (original description: Putative spl1, Description = Splicing factor 3A subunit 1, PFAM = PF01805;PF01805;PF12230;PF00240)' T '27.1' 'RNA.processing' 'niben044scf00009119ctg003_10168-14725' '(at2g33320 : 223.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative At1g04540, Description = Putative ankyrin repeat-containing protein kinase A-like, PFAM = PF00168)' T '27.1' 'RNA.processing' 'niben044scf00009668ctg002_3030-8914' '(at1g51310 : 582.0) transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases; FUNCTIONS IN: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity, transferase activity; INVOLVED IN: tRNA processing, RNA processing; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), tRNA-specific 2-thiouridylase (InterPro:IPR004506); Has 8544 Blast hits to 8538 proteins in 2600 species: Archae - 0; Bacteria - 5626; Metazoa - 134; Fungi - 60; Plants - 58; Viruses - 0; Other Eukaryotes - 2666 (source: NCBI BLink). & (gnl|cdd|38016 : 378.0) no description available & (gnl|cdd|66710 : 363.0) no description available & (reliability: 1164.0) & (original description: Putative mnmA, Description = tRNA-specific 2-thiouridylase MnmA, PFAM = PF03054)' T '27.1' 'RNA.processing' 'niben044scf00011203ctg000_23374-30393' '(gnl|cdd|38670 : 130.0) no description available & (gnl|cdd|29717 : 125.0) no description available & (at1g76860 : 121.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT1G21190.1); Has 1289 Blast hits to 1289 proteins in 302 species: Archae - 306; Bacteria - 0; Metazoa - 397; Fungi - 221; Plants - 178; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative LSM3B, Description = Sm-like protein LSM3B, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben044scf00011300ctg000_2367-9813' '(at1g28060 : 581.0) Pre-mRNA-splicing factor 3; CONTAINS InterPro DOMAIN/s: Pre-mRNA-splicing factor 3 (InterPro:IPR013881); BEST Arabidopsis thaliana protein match is: Pre-mRNA-splicing factor 3 (TAIR:AT3G55930.1); Has 22923 Blast hits to 12760 proteins in 707 species: Archae - 18; Bacteria - 1085; Metazoa - 11525; Fungi - 3053; Plants - 1999; Viruses - 93; Other Eukaryotes - 5150 (source: NCBI BLink). & (gnl|cdd|71998 : 374.0) no description available & (gnl|cdd|37980 : 354.0) no description available & (reliability: 1162.0) & (original description: Putative BnaA08g18640D, Description = BnaA08g18640D protein, PFAM = PF06544;PF08572)' T '27.1' 'RNA.processing' 'niben044scf00011860ctg005_1-2923' '(at1g65700 : 160.0) Small nuclear ribonucleoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, small nucleolar ribonucleoprotein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649). & (gnl|cdd|36995 : 134.0) no description available & (gnl|cdd|29714 : 106.0) no description available & (reliability: 320.0) & (original description: Putative LSM8, Description = Sm-like protein LSM8, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben044scf00016950ctg000_5988-7847' '(at4g18372 : 135.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29704 : 80.6) no description available & (reliability: 270.0) & (original description: Putative snrnp, Description = Small nuclear ribonucleoprotein family protein, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben044scf00017021ctg005_7095-13745' '(at5g53180 : 385.0) Encodes one of the two polypyrimidine tract-binding (PTB) protein homologs in the Arabidopsis genome. Double mutants have defects in pollen germination.; polypyrimidine tract-binding protein 2 (PTB2); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: pollen germination, regulation of RNA splicing, regulation of translation; LOCATED IN: nucleus, cytoplasmic mRNA processing body, cytoplasm; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: polypyrimidine tract-binding protein 1 (TAIR:AT3G01150.1); Has 1611 Blast hits to 972 proteins in 138 species: Archae - 0; Bacteria - 10; Metazoa - 1107; Fungi - 42; Plants - 324; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|36404 : 233.0) no description available & (reliability: 770.0) & (original description: Putative PTB2, Description = Polypyrimidine tract-binding RNA transport protein-like, PFAM = PF00076)' T '27.1' 'RNA.processing' 'niben044scf00017224ctg015_780-3741' '(at1g01860 : 184.0) dimethyladenosine transferase; PALEFACE 1 (PFC1); FUNCTIONS IN: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity; INVOLVED IN: response to cold; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA adenine methylase transferase, N-terminal (InterPro:IPR020598), Ribosomal RNA adenine methylase transferase, conserved site (InterPro:IPR020596), Ribosomal RNA adenine methylase transferase (InterPro:IPR001737); BEST Arabidopsis thaliana protein match is: Ribosomal RNA adenine dimethylase family protein (TAIR:AT5G66360.2); Has 9632 Blast hits to 9628 proteins in 3006 species: Archae - 228; Bacteria - 6144; Metazoa - 264; Fungi - 142; Plants - 116; Viruses - 0; Other Eukaryotes - 2738 (source: NCBI BLink). & (gnl|cdd|80598 : 112.0) no description available & (gnl|cdd|36038 : 89.7) no description available & (reliability: 368.0) & (original description: Putative PFC1, Description = rRNA adenine N(6)-methyltransferase, PFAM = PF00398)' T '27.1' 'RNA.processing' 'niben044scf00017852ctg009_1-3920' '(at1g01860 : 189.0) dimethyladenosine transferase; PALEFACE 1 (PFC1); FUNCTIONS IN: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity; INVOLVED IN: response to cold; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA adenine methylase transferase, N-terminal (InterPro:IPR020598), Ribosomal RNA adenine methylase transferase, conserved site (InterPro:IPR020596), Ribosomal RNA adenine methylase transferase (InterPro:IPR001737); BEST Arabidopsis thaliana protein match is: Ribosomal RNA adenine dimethylase family protein (TAIR:AT5G66360.2); Has 9632 Blast hits to 9628 proteins in 3006 species: Archae - 228; Bacteria - 6144; Metazoa - 264; Fungi - 142; Plants - 116; Viruses - 0; Other Eukaryotes - 2738 (source: NCBI BLink). & (gnl|cdd|80598 : 118.0) no description available & (gnl|cdd|36038 : 97.4) no description available & (reliability: 378.0) & (original description: Putative PFC1, Description = rRNA adenine N(6)-methyltransferase, PFAM = PF00398)' T '27.1' 'RNA.processing' 'niben044scf00019366ctg003_4569-10851' '(at4g03120 : 100.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, U1-C type (InterPro:IPR013085), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type matrin (InterPro:IPR000690); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38664 : 81.6) no description available & (reliability: 200.0) & (original description: Putative snrpC, Description = U1 small nuclear ribonucleoprotein C, PFAM = PF06220)' T '27.1' 'RNA.processing' 'niben044scf00019521ctg006_9865-16753' '(at3g17040 : 744.0) It is a RNA tetratricopeptide repeat-containing protein required for normal processing of transcripts from the polycistronic chloroplast psbB-psbT-psbH-petB-petD operon coding for proteins of the photosystem II and cytochrome b6/f complexes. Localizes to the chloroplast membrane. Involved in regulating plastidial gene expression and biogenesis.; high chlorophyll fluorescent 107 (HCF107); FUNCTIONS IN: binding; INVOLVED IN: plastid organization, RNA processing, regulation of translation; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: pre-mRNA splicing factor-related (TAIR:AT4G03430.1). & (q9fns4|mbb1_chlre : 262.0) PsbB mRNA maturation factor Mbb1, chloroplast precursor - Chlamydomonas reinhardtii & (gnl|cdd|35716 : 101.0) no description available & (reliability: 1488.0) & (original description: Putative HCF107, Description = Protein high chlorophyll fluorescent 107, PFAM = )' T '27.1' 'RNA.processing' 'niben044scf00020326ctg006_3873-8217' '(at2g25290 : 573.0) Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein (TAIR:AT4G32070.1). & (gnl|cdd|39354 : 484.0) no description available & (reliability: 1146.0) & (original description: Putative BnaC07g43660D, Description = BnaC07g43660D protein, PFAM = PF13181;PF00564)' T '27.1' 'RNA.processing' 'niben044scf00022976ctg009_64-6421' '(at3g13300 : 419.0) Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development.; VARICOSE (VCS); FUNCTIONS IN: protein homodimerization activity, nucleotide binding; INVOLVED IN: mRNA catabolic process, deadenylation-independent decapping of nuclear-transcribed mRNA, leaf morphogenesis; LOCATED IN: cytosol, nucleus, cytoplasmic mRNA processing body; EXPRESSED IN: whole plant, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: varicose-related (TAIR:AT3G13290.1); Has 885 Blast hits to 799 proteins in 264 species: Archae - 2; Bacteria - 218; Metazoa - 230; Fungi - 185; Plants - 114; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|37127 : 325.0) no description available & (reliability: 838.0) & (original description: Putative EDC4, Description = Enhancer of mRNA-decapping protein 4, PFAM = PF16529)' T '27.1' 'RNA.processing' 'niben044scf00023200ctg002_892-5980' '(at1g43190 : 338.0) polypyrimidine tract-binding protein 3 (PTB3); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: regulation of RNA splicing, regulation of translation; LOCATED IN: nucleus, cytoplasmic mRNA processing body, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), HnRNP-L/PTB/hephaestus splicing factor (InterPro:IPR006536), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: polypyrimidine tract-binding protein 1 (TAIR:AT3G01150.1); Has 2368 Blast hits to 1946 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 1467; Fungi - 40; Plants - 582; Viruses - 0; Other Eukaryotes - 279 (source: NCBI BLink). & (gnl|cdd|36404 : 219.0) no description available & (reliability: 676.0) & (original description: Putative ptb, Description = Polypyrimidine tract-binding protein, PFAM = PF13893)' T '27.1' 'RNA.processing' 'niben044scf00023607ctg002_1-5344' '(at4g17610 : 375.0) tRNA/rRNA methyltransferase (SpoU) family protein; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537); Has 6630 Blast hits to 6614 proteins in 1865 species: Archae - 7; Bacteria - 4787; Metazoa - 103; Fungi - 50; Plants - 109; Viruses - 0; Other Eukaryotes - 1574 (source: NCBI BLink). & (gnl|cdd|36057 : 98.2) no description available & (reliability: 750.0) & (original description: Putative dl4840c, Description = Putative methyltransferase TARBP1, PFAM = )' T '27.1' 'RNA.processing' 'niben044scf00024628ctg005_8340-10741' '(at4g02400 : 107.0) U3 ribonucleoprotein (Utp) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: small-subunit processome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp14 (InterPro:IPR006709); BEST Arabidopsis thaliana protein match is: U3 ribonucleoprotein (Utp) family protein (TAIR:AT5G08600.2); Has 7468 Blast hits to 4514 proteins in 366 species: Archae - 14; Bacteria - 554; Metazoa - 2650; Fungi - 816; Plants - 392; Viruses - 146; Other Eukaryotes - 2896 (source: NCBI BLink). & (gnl|cdd|68196 : 103.0) no description available & (gnl|cdd|37383 : 87.8) no description available & (reliability: 208.0) & (original description: Putative Os03g0343300, Description = Os03g0343300 protein, PFAM = PF04615)' T '27.1' 'RNA.processing' 'niben044scf00025207ctg003_4619-10417' '(at3g52120 : 192.0) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SWAP/Surp (InterPro:IPR000061), D111/G-patch (InterPro:IPR000467); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36183 : 132.0) no description available & (reliability: 384.0) & (original description: Putative TCM_005922, Description = SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein isoform 4, PFAM = PF01805;PF01585)' T '27.1' 'RNA.processing' 'niben044scf00025705ctg003_67-6190' '(at4g14790 : 457.0) encodes a nuclear-encoded DExH box RNA helicase, which is localized to mitochondria and whose in vitro ATPase activity is stimulated with mitochondrial RNA.; ATSUV3; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DNA/RNA helicase, C-terminal (InterPro:IPR001650); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial, putative (TAIR:AT5G39840.1); Has 3666 Blast hits to 3643 proteins in 672 species: Archae - 20; Bacteria - 977; Metazoa - 276; Fungi - 353; Plants - 117; Viruses - 18; Other Eukaryotes - 1905 (source: NCBI BLink). & (gnl|cdd|36171 : 388.0) no description available & (reliability: 914.0) & (original description: Putative SUV3, Description = ATP-dependent RNA helicase SUPV3L1, mitochondrial, PFAM = PF00271)' T '27.1' 'RNA.processing' 'niben044scf00026085ctg005_11717-15938' '(at2g25290 : 675.0) Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein (TAIR:AT4G32070.1). & (gnl|cdd|39354 : 453.0) no description available & (reliability: 1350.0) & (original description: Putative KK1_031626, Description = Protein unc-45 isogeny A, PFAM = PF00564)' T '27.1' 'RNA.processing' 'niben044scf00027137ctg011_1-6513' '(at2g17580 : 181.0) Polynucleotide adenylyltransferase family protein; FUNCTIONS IN: RNA binding, nucleotidyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Poly A polymerase, head domain (InterPro:IPR002646); BEST Arabidopsis thaliana protein match is: Polynucleotide adenylyltransferase family protein (TAIR:AT1G28090.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37370 : 140.0) no description available & (gnl|cdd|30962 : 105.0) no description available & (reliability: 362.0) & (original description: Putative At1g28090, Description = Polynucleotide adenylyltransferase family protein, PFAM = PF01743;PF12627)' T '27.1' 'RNA.processing' 'niben044scf00028479ctg007_2238-9601' '(at5g55100 : 277.0) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147), SWAP/Surp (InterPro:IPR000061); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37058 : 245.0) no description available & (reliability: 554.0) & (original description: Putative PGSC0003DMG400014387, Description = SWAP (Suppressor-of-white-APricot)/surp domain protein, putative, PFAM = PF09750;PF01805;PF01805)' T '27.1' 'RNA.processing' 'niben044scf00032208ctg002_1-8828' '(at1g59760 : 1073.0) RNA helicase, ATP-dependent, SK12/DOB1 protein; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT2G06990.1); Has 9909 Blast hits to 8438 proteins in 1290 species: Archae - 828; Bacteria - 3072; Metazoa - 1170; Fungi - 1231; Plants - 476; Viruses - 32; Other Eukaryotes - 3100 (source: NCBI BLink). & (gnl|cdd|36166 : 1023.0) no description available & (gnl|cdd|34219 : 621.0) no description available & (reliability: 2146.0) & (original description: Putative mtr4, Description = Antiviral helicase, PFAM = PF00271;PF00270;PF13234)' T '27.1' 'RNA.processing' 'niben044scf00034552ctg000_1-4539' '(at3g14080 : 183.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT1G19120.1); Has 1121 Blast hits to 1119 proteins in 232 species: Archae - 63; Bacteria - 0; Metazoa - 413; Fungi - 327; Plants - 207; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|36993 : 162.0) no description available & (gnl|cdd|29715 : 110.0) no description available & (reliability: 366.0) & (original description: Putative LSM1B, Description = Sm-like protein LSM1B, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben044scf00035734ctg005_2253-7600' '(at2g41500 : 576.0) Encodes LACHESIS (LIS), a protein with seven WD40 repeats. LIS is homologous to the yeast splicing factor PRP4 which is associated with the U4/U6 complex of the spliceosome. LIS is involved in a mechanism that prevents accessory cells from adopting gametic cell fate: lis mutant forms supernumerary egg cells.; LACHESIS (LIS); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), Pre-mRNA processing factor 4 (PRP4) like (InterPro:IPR014906), WD40 repeat (InterPro:IPR001680), Splicing factor motif (InterPro:IPR003648), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G05720.1); Has 96331 Blast hits to 36444 proteins in 930 species: Archae - 78; Bacteria - 11869; Metazoa - 38307; Fungi - 21059; Plants - 12275; Viruses - 15; Other Eukaryotes - 12728 (source: NCBI BLink). & (gnl|cdd|35493 : 564.0) no description available & (gnl|cdd|29257 : 267.0) no description available & (p93107|pf20_chlre : 128.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1152.0) & (original description: Putative LIS, Description = U4/U6 small nuclear ribonucleoprotein PRP4-like protein, PFAM = PF08799;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '27.1' 'RNA.processing' 'niben044scf00039549ctg009_1-5845' '(at3g26560 : 1650.0) ATP-dependent RNA helicase, putative; FUNCTIONS IN: in 6 functions; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Domain of unknown function DUF1605 (InterPro:IPR011709), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G32490.2); Has 53052 Blast hits to 35825 proteins in 3176 species: Archae - 195; Bacteria - 13845; Metazoa - 17201; Fungi - 5520; Plants - 3365; Viruses - 1203; Other Eukaryotes - 11723 (source: NCBI BLink). & (gnl|cdd|36140 : 1015.0) no description available & (gnl|cdd|31829 : 683.0) no description available & (reliability: 3300.0) & (original description: Putative dhx8, Description = ATP-dependent RNA helicase DHX8, PFAM = PF00270;PF00575;PF07717;PF04408;PF00271)' T '27.1' 'RNA.processing' 'niben044scf00040382ctg002_1-3778' '(at2g17580 : 89.0) Polynucleotide adenylyltransferase family protein; FUNCTIONS IN: RNA binding, nucleotidyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Poly A polymerase, head domain (InterPro:IPR002646); BEST Arabidopsis thaliana protein match is: Polynucleotide adenylyltransferase family protein (TAIR:AT1G28090.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative pcnB, Description = Putative poly(A) polymerase, PFAM = PF01743)' T '27.1' 'RNA.processing' 'niben044scf00041800ctg000_11602-18174' '(at1g08370 : 312.0) Encodes DCP1 involved in mRNA decapping. DCP1 forms a mRNA decapping complex with DCP2 (At5g13570) and VCS (VARICOSE) (At3g13300). However, unlike DCP2, DCP1 itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP2.; decapping 1 (DCP1); CONTAINS InterPro DOMAIN/s: Dcp1-like decapping (InterPro:IPR010334); Has 3561 Blast hits to 2917 proteins in 377 species: Archae - 4; Bacteria - 239; Metazoa - 1310; Fungi - 561; Plants - 741; Viruses - 142; Other Eukaryotes - 564 (source: NCBI BLink). & (gnl|cdd|38079 : 180.0) no description available & (gnl|cdd|69574 : 173.0) no description available & (reliability: 624.0) & (original description: Putative At1g08370, Description = mRNA-decapping enzyme-like protein, PFAM = PF06058)' T '27.1' 'RNA.processing' 'niben044scf00045685ctg006_1791-10026' '(at4g05410 : 472.0) Encodes a nucleolar protein with seven WD40-repeats that plays a role in embryo sac development and is critical for the correct positioning of the division plane of zygote and the apical cell lineage in Arabidopsis. YAO may act by modulating nucleolar function, such as rRNA biogenesis, during early embryogenesis and gametogenesis.; YAOZHE (YAO); FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: acceptance of pollen, mitochondrial fission, embryo sac development, embryo development ending in seed dormancy; LOCATED IN: nucleolus, anaphase-promoting complex, small nucleolar ribonucleoprotein complex, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G21130.1); Has 47131 Blast hits to 24802 proteins in 761 species: Archae - 50; Bacteria - 6358; Metazoa - 18156; Fungi - 10195; Plants - 5539; Viruses - 94; Other Eukaryotes - 6739 (source: NCBI BLink). & (gnl|cdd|35520 : 459.0) no description available & (gnl|cdd|29257 : 141.0) no description available & (o24076|gblp_medsa : 87.4) Guanine nucleotide-binding protein subunit beta-like protein - Medicago sativa (Alfalfa) & (reliability: 914.0) & (original description: Putative YAO, Description = U3 snoRNP-associated protein-like YAO, PFAM = PF00400;PF00400;PF00400)' T '27.1' 'RNA.processing' 'niben044scf00050092ctg003_7709-11874' '(at5g16860 : 494.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 92.8) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 968.0) & (original description: Putative crr2, Description = Pentatricopeptide repeat-containing family protein, PFAM = PF13041;PF01535;PF01535;PF01535;PF14432)' T '27.1' 'RNA.processing' 'niben044scf00057600ctg002_3868-9882' '(at2g23930 : 131.0) probable small nuclear ribonucleoprotein G (SNRNP-G); CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT3G11500.1); Has 1073 Blast hits to 1073 proteins in 252 species: Archae - 104; Bacteria - 0; Metazoa - 399; Fungi - 257; Plants - 180; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (p24715|ruxg_medsa : 120.0) Probable small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG) - Medicago sativa (Alfalfa) & (gnl|cdd|29706 : 106.0) no description available & (gnl|cdd|36991 : 99.2) no description available & (reliability: 262.0) & (original description: Putative smg1, Description = Small nuclear ribonucleoprotein G, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben044scf00058500ctg001_2996-12112' '(at5g05970 : 673.0) a WD40 repeat protein related to the animal NEDD1/GCP-WD protein, which interacts with the g-tubulin complex. Plays a critical role in MT organization during mitosis; NEURAL PRECURSOR CELL EXPRESSED, DEVELOPMENTALLY DOWN-REGULATED GENE 1 (NEDD1); FUNCTIONS IN: nucleotide binding; INVOLVED IN: in 6 processes; LOCATED IN: kinetochore microtubule, CUL4 RING ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39579 : 419.0) no description available & (gnl|cdd|29257 : 116.0) no description available & (reliability: 1346.0) & (original description: Putative NEDD1, Description = Protein NEDD1, PFAM = PF00400)' T '27.1' 'RNA.processing' 'niben044scf00061373ctg000_1-5504' '(gnl|cdd|36809 : 382.0) no description available & (at4g25630 : 380.0) encodes a fibrillarin, a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA, U60.2f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated.; fibrillarin 2 (FIB2); FUNCTIONS IN: snoRNA binding; INVOLVED IN: response to salt stress, RNA methylation, rRNA processing; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fibrillarin (InterPro:IPR000692); BEST Arabidopsis thaliana protein match is: fibrillarin 1 (TAIR:AT5G52470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85352 : 337.0) no description available & (reliability: 754.0) & (original description: Putative FIB3, Description = Putative rRNA 2'-O-methyltransferase fibrillarin 3, PFAM = PF01269)' T '27.1' 'RNA.processing' 'niben101scf00051_31911-45531' '(at1g11650 : 424.0) RBP45B; FUNCTIONS IN: RNA binding; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 29660 Blast hits to 18296 proteins in 811 species: Archae - 14; Bacteria - 2273; Metazoa - 15265; Fungi - 3531; Plants - 5870; Viruses - 0; Other Eukaryotes - 2707 (source: NCBI BLink). & (gnl|cdd|35370 : 137.0) no description available & (p28644|roc1_spiol : 86.3) 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) & (reliability: 770.0) & (original description: Putative nbp1, Description = Polyadenylate-binding protein RBP47B, PFAM = PF00076;PF00076;PF00076)' T '27.1' 'RNA.processing' 'niben101scf00144_259979-278977' '(at1g08370 : 253.0) Encodes DCP1 involved in mRNA decapping. DCP1 forms a mRNA decapping complex with DCP2 (At5g13570) and VCS (VARICOSE) (At3g13300). However, unlike DCP2, DCP1 itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP2.; decapping 1 (DCP1); CONTAINS InterPro DOMAIN/s: Dcp1-like decapping (InterPro:IPR010334); Has 3561 Blast hits to 2917 proteins in 377 species: Archae - 4; Bacteria - 239; Metazoa - 1310; Fungi - 561; Plants - 741; Viruses - 142; Other Eukaryotes - 564 (source: NCBI BLink). & (gnl|cdd|38079 : 158.0) no description available & (gnl|cdd|69574 : 157.0) no description available & (reliability: 506.0) & (original description: Putative Os12g0156400, Description = Dcp1-like decapping family protein, expressed, PFAM = PF06058)' T '27.1' 'RNA.processing' 'niben101scf00163_1945800-1949674' '(at3g46790 : 487.0) Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-H subfamily) with 9 pentatricopeptide (PPR) repeats. The protein is involved the intergenic processing of chloroplast RNA between rps7 and ndhB, which is essential for ndhB translation.; CHLORORESPIRATORY REDUCTION 2 (CRR2); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 36401 Blast hits to 13536 proteins in 261 species: Archae - 0; Bacteria - 8; Metazoa - 92; Fungi - 72; Plants - 35786; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink). & (reliability: 974.0) & (original description: Putative crr2, Description = Chlororespiratory reduction 2, PFAM = PF01535;PF01535;PF14432;PF13041;PF13041;PF13041)' T '27.1' 'RNA.processing' 'niben101scf00246_451661-458285' '(at4g03120 : 102.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, U1-C type (InterPro:IPR013085), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type matrin (InterPro:IPR000690); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87045 : 82.7) no description available & (gnl|cdd|38664 : 82.4) no description available & (reliability: 204.0) & (original description: Putative snrpC, Description = U1 small nuclear ribonucleoprotein C, PFAM = PF06220)' T '27.1' 'RNA.processing' 'niben101scf00271_111212-116931' '(at5g22100 : 437.0) RNA cyclase family protein; FUNCTIONS IN: RNA-3'-phosphate cyclase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA 3'-terminal phosphate cyclase-like, conserved site (InterPro:IPR020719), RNA 3'-terminal phosphate cyclase-like (InterPro:IPR000228), RNA 3'-terminal phosphate cyclase, insert domain (InterPro:IPR013796), RNA 3'-terminal phosphate cyclase-like, eukaryotic (InterPro:IPR016443), RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (InterPro:IPR013792); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30125 : 408.0) no description available & (gnl|cdd|39183 : 347.0) no description available & (reliability: 874.0) & (original description: Putative rcl1, Description = Putative RNA 3'-terminal phosphate cyclase-like protein, PFAM = PF05189;PF01137)' T '27.1' 'RNA.processing' 'niben101scf00298_270284-275560' '(at3g14080 : 139.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT1G19120.1); Has 1121 Blast hits to 1119 proteins in 232 species: Archae - 63; Bacteria - 0; Metazoa - 413; Fungi - 327; Plants - 207; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|36993 : 119.0) no description available & (gnl|cdd|29715 : 98.3) no description available & (reliability: 278.0) & (original description: Putative LSM, Description = Small nuclear ribonucleoprotein, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben101scf00369_935597-942969' '(q43582|lsm4_tobac : 216.0) Probable U6 snRNA-associated Sm-like protein LSm4 (Glycine-rich protein 10) (GRP 10) - Nicotiana tabacum (Common tobacco) & (at5g27720 : 186.0) embryo defective 1644 (emb1644); CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649); BEST Arabidopsis thaliana protein match is: snRNP core protein SMD3 (TAIR:AT1G76300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29710 : 163.0) no description available & (gnl|cdd|38503 : 157.0) no description available & (reliability: 372.0) & (original description: Putative lsm4, Description = U6 snRNA-associated Sm-like protein LSm4, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben101scf00381_131374-144388' '(at2g34750 : 517.0) RNA polymerase I specific transcription initiation factor RRN3 protein; FUNCTIONS IN: RNA polymerase I transcription factor activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase I specific transcription initiation factor RRN3 (InterPro:IPR007991); BEST Arabidopsis thaliana protein match is: RNA polymerase I specific transcription initiation factor RRN3 protein (TAIR:AT1G30590.1); Has 368 Blast hits to 356 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 131; Plants - 69; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|68882 : 394.0) no description available & (gnl|cdd|37645 : 292.0) no description available & (reliability: 1034.0) & (original description: Putative At2g34750, Description = Putative uncharacterized protein At2g34750, PFAM = PF05327)' T '27.1' 'RNA.processing' 'niben101scf00393_215289-220827' '(at4g30220 : 157.0) small nuclear ribonucleoprotein F (RUXF); FUNCTIONS IN: molecular_function unknown; LOCATED IN: nucleus, small nucleolar ribonucleoprotein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small nuclear ribonucleoprotein SmF (InterPro:IPR016487), Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT2G14285.1). & (gnl|cdd|38692 : 140.0) no description available & (gnl|cdd|29709 : 127.0) no description available & (reliability: 314.0) & (original description: Putative smf1, Description = Small nuclear ribonucleoprotein F, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben101scf00481_663-9451' '(at1g43190 : 719.0) polypyrimidine tract-binding protein 3 (PTB3); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: regulation of RNA splicing, regulation of translation; LOCATED IN: nucleus, cytoplasmic mRNA processing body, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), HnRNP-L/PTB/hephaestus splicing factor (InterPro:IPR006536), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: polypyrimidine tract-binding protein 1 (TAIR:AT3G01150.1); Has 2368 Blast hits to 1946 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 1467; Fungi - 40; Plants - 582; Viruses - 0; Other Eukaryotes - 279 (source: NCBI BLink). & (gnl|cdd|36404 : 464.0) no description available & (reliability: 1438.0) & (original description: Putative ptb, Description = Polypyrimidine track-binding protein homologue, PFAM = PF00076;PF00076;PF13893;PF13893)' T '27.1' 'RNA.processing' 'niben101scf00494_666330-692653' '(at1g22660 : 598.0) Polynucleotide adenylyltransferase family protein; FUNCTIONS IN: tRNA adenylyltransferase activity, RNA binding, nucleotidyltransferase activity; INVOLVED IN: tRNA processing, RNA processing; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Poly A polymerase, head domain (InterPro:IPR002646); BEST Arabidopsis thaliana protein match is: Polynucleotide adenylyltransferase family protein (TAIR:AT2G17580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37370 : 259.0) no description available & (gnl|cdd|30962 : 155.0) no description available & (reliability: 1196.0) & (original description: Putative CCA1, Description = TRNA nucleotidyltransferase, PFAM = PF01743)' T '27.1' 'RNA.processing' 'niben101scf00654_216390-233807' '(at3g13300 : 1200.0) Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development.; VARICOSE (VCS); FUNCTIONS IN: protein homodimerization activity, nucleotide binding; INVOLVED IN: mRNA catabolic process, deadenylation-independent decapping of nuclear-transcribed mRNA, leaf morphogenesis; LOCATED IN: cytosol, nucleus, cytoplasmic mRNA processing body; EXPRESSED IN: whole plant, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: varicose-related (TAIR:AT3G13290.1); Has 885 Blast hits to 799 proteins in 264 species: Archae - 2; Bacteria - 218; Metazoa - 230; Fungi - 185; Plants - 114; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|37127 : 807.0) no description available & (reliability: 2400.0) & (original description: Putative VCS, Description = Enhancer of mRNA-decapping protein 4, PFAM = PF16529)' T '27.1' 'RNA.processing' 'niben101scf00747_726473-750088' '(at3g14080 : 142.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT1G19120.1); Has 1121 Blast hits to 1119 proteins in 232 species: Archae - 63; Bacteria - 0; Metazoa - 413; Fungi - 327; Plants - 207; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|36993 : 131.0) no description available & (gnl|cdd|29715 : 107.0) no description available & (reliability: 284.0) & (original description: Putative LSM1B, Description = Sm-like protein LSM1B, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben101scf00774_244145-248428' '(at4g30220 : 154.0) small nuclear ribonucleoprotein F (RUXF); FUNCTIONS IN: molecular_function unknown; LOCATED IN: nucleus, small nucleolar ribonucleoprotein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small nuclear ribonucleoprotein SmF (InterPro:IPR016487), Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT2G14285.1). & (gnl|cdd|38692 : 135.0) no description available & (gnl|cdd|29709 : 123.0) no description available & (reliability: 308.0) & (original description: Putative smf1, Description = Small nuclear ribonucleoprotein F, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben101scf00801_188405-194511' '(at2g43810 : 149.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT3G59810.1); Has 1180 Blast hits to 1180 proteins in 300 species: Archae - 305; Bacteria - 0; Metazoa - 337; Fungi - 255; Plants - 126; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|36994 : 128.0) no description available & (gnl|cdd|29713 : 120.0) no description available & (reliability: 298.0) & (original description: Putative LSM6B, Description = Sm-like protein LSM36B, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben101scf00851_59798-86128' '(at1g08370 : 303.0) Encodes DCP1 involved in mRNA decapping. DCP1 forms a mRNA decapping complex with DCP2 (At5g13570) and VCS (VARICOSE) (At3g13300). However, unlike DCP2, DCP1 itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP2.; decapping 1 (DCP1); CONTAINS InterPro DOMAIN/s: Dcp1-like decapping (InterPro:IPR010334); Has 3561 Blast hits to 2917 proteins in 377 species: Archae - 4; Bacteria - 239; Metazoa - 1310; Fungi - 561; Plants - 741; Viruses - 142; Other Eukaryotes - 564 (source: NCBI BLink). & (gnl|cdd|69574 : 178.0) no description available & (gnl|cdd|38079 : 171.0) no description available & (reliability: 606.0) & (original description: Putative Sb02g007770, Description = Putative uncharacterized protein Sb02g007770, PFAM = PF06058)' T '27.1' 'RNA.processing' 'niben101scf00907_14496-20469' '(at1g14650 : 573.0) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: RNA processing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SWAP/Surp (InterPro:IPR000061), Ubiquitin (InterPro:IPR000626), Pre-mRNA splicing factor PRP21 like protein (InterPro:IPR022030), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: SWAP (Suppressor-of-White-APricot)/surp domain-containing protein (TAIR:AT1G14640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35231 : 116.0) no description available & (gnl|cdd|29202 : 100.0) no description available & (reliability: 1146.0) & (original description: Putative spl1, Description = Splicing factor 3A subunit 1, PFAM = PF01805;PF01805;PF00240;PF12230)' T '27.1' 'RNA.processing' 'niben101scf00934_172388-178692' '(at1g03330 : 172.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), U6 snRNA-associated Sm-like protein LSm2 (InterPro:IPR016654), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); Has 762 Blast hits to 762 proteins in 209 species: Archae - 2; Bacteria - 0; Metazoa - 303; Fungi - 225; Plants - 97; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|38658 : 153.0) no description available & (gnl|cdd|29712 : 134.0) no description available & (reliability: 344.0) & (original description: Putative LSM2, Description = Sm-like protein LSM2, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben101scf01037_811276-824439' '(at4g15420 : 654.0) Ubiquitin fusion degradation UFD1 family protein; FUNCTIONS IN: peptidase activity, zinc ion binding; INVOLVED IN: proteolysis, ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Peptidase, C-terminal, archaeal/bacterial (InterPro:IPR007280), Ubiquitin fusion degradation protein UFD1 (InterPro:IPR004854); BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT2G29070.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37027 : 183.0) no description available & (gnl|cdd|66804 : 155.0) no description available & (reliability: 1308.0) & (original description: Putative At4g15420, Description = AT4g15420/dl3755w, PFAM = PF03152)' T '27.1' 'RNA.processing' 'niben101scf01085_589105-604270' '(gnl|cdd|35552 : 401.0) no description available & (gnl|cdd|30859 : 384.0) no description available & (at1g55150 : 288.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 254.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 564.0) & (original description: Putative rhlE, Description = ATP-dependent RNA helicase RhlE, PFAM = PF00271;PF00270)' T '27.1' 'RNA.processing' 'niben101scf01182_226570-239696' '(at5g23690 : 565.0) Polynucleotide adenylyltransferase family protein; FUNCTIONS IN: RNA binding, nucleotidyltransferase activity; INVOLVED IN: RNA processing; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Poly A polymerase, head domain (InterPro:IPR002646); BEST Arabidopsis thaliana protein match is: polynucleotide adenylyltransferase family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G48830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37370 : 335.0) no description available & (gnl|cdd|30962 : 194.0) no description available & (reliability: 1130.0) & (original description: Putative pcnB, Description = Polynucleotide adenylyltransferase family protein, PFAM = PF12627;PF01743)' T '27.1' 'RNA.processing' 'niben101scf01269_426979-433787' '(at4g27000 : 389.0) ATRBP45C; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35370 : 136.0) no description available & (gnl|cdd|31068 : 91.3) no description available & (p19683|roc4_nicsy : 81.3) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 748.0) & (original description: Putative RBP45, Description = Polyadenylate-binding protein RBP45, PFAM = PF00076;PF00076;PF00076)' T '27.1' 'RNA.processing' 'niben101scf01292_165152-191284' '(at1g22660 : 584.0) Polynucleotide adenylyltransferase family protein; FUNCTIONS IN: tRNA adenylyltransferase activity, RNA binding, nucleotidyltransferase activity; INVOLVED IN: tRNA processing, RNA processing; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Poly A polymerase, head domain (InterPro:IPR002646); BEST Arabidopsis thaliana protein match is: Polynucleotide adenylyltransferase family protein (TAIR:AT2G17580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37370 : 251.0) no description available & (gnl|cdd|30962 : 149.0) no description available & (reliability: 1168.0) & (original description: Putative CCA1, Description = TRNA nucleotidyltransferase, PFAM = PF01743)' T '27.1' 'RNA.processing' 'niben101scf01368_75494-86221' '(at4g02400 : 565.0) U3 ribonucleoprotein (Utp) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: small-subunit processome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp14 (InterPro:IPR006709); BEST Arabidopsis thaliana protein match is: U3 ribonucleoprotein (Utp) family protein (TAIR:AT5G08600.2); Has 7468 Blast hits to 4514 proteins in 366 species: Archae - 14; Bacteria - 554; Metazoa - 2650; Fungi - 816; Plants - 392; Viruses - 146; Other Eukaryotes - 2896 (source: NCBI BLink). & (gnl|cdd|68196 : 408.0) no description available & (gnl|cdd|37383 : 193.0) no description available & (reliability: 1058.0) & (original description: Putative At4g02400, Description = U3 ribonucleoprotein family protein, PFAM = PF04615)' T '27.1' 'RNA.processing' 'niben101scf01413_76006-81711' '(at1g10580 : 861.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G54520.1); Has 62674 Blast hits to 30927 proteins in 942 species: Archae - 75; Bacteria - 8018; Metazoa - 23835; Fungi - 13551; Plants - 7464; Viruses - 27; Other Eukaryotes - 9704 (source: NCBI BLink). & (gnl|cdd|35503 : 576.0) no description available & (gnl|cdd|29257 : 206.0) no description available & (reliability: 1722.0) & (original description: Putative CDC40, Description = Pre-mRNA-processing factor 17, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '27.1' 'RNA.processing' 'niben101scf01440_584097-589353' '(at4g31200 : 498.0) SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), SWAP/Surp (InterPro:IPR000061), RNA polymerase II, large subunit, CTD (InterPro:IPR006569); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 996.0) & (original description: Putative At4g31200, Description = At4g31200, PFAM = PF01805;PF04818)' T '27.1' 'RNA.processing' 'niben101scf01497_54001-81171' '(at2g17580 : 440.0) Polynucleotide adenylyltransferase family protein; FUNCTIONS IN: RNA binding, nucleotidyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Poly A polymerase, head domain (InterPro:IPR002646); BEST Arabidopsis thaliana protein match is: Polynucleotide adenylyltransferase family protein (TAIR:AT1G28090.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37370 : 238.0) no description available & (gnl|cdd|30962 : 158.0) no description available & (reliability: 880.0) & (original description: Putative Os03g0131400, Description = Os03g0131400 protein, PFAM = PF12627;PF01743)' T '27.1' 'RNA.processing' 'niben101scf01500_70831-83755' '(at4g28450 : 759.0) This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase; nucleotide binding;protein binding; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Sof1-like protein (InterPro:IPR007287), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 37337 Blast hits to 21127 proteins in 676 species: Archae - 38; Bacteria - 5948; Metazoa - 14528; Fungi - 7710; Plants - 4379; Viruses - 0; Other Eukaryotes - 4734 (source: NCBI BLink). & (gnl|cdd|35489 : 554.0) no description available & (gnl|cdd|29257 : 144.0) no description available & (reliability: 1518.0) & (original description: Putative DCAF13, Description = DDB1- and CUL4-associated factor 13, PFAM = PF08662;PF04158;PF00400;PF00400;PF00400)' T '27.1' 'RNA.processing' 'niben101scf01500_70934-193742' '(at4g28450 : 288.0) This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase; nucleotide binding;protein binding; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Sof1-like protein (InterPro:IPR007287), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 37337 Blast hits to 21127 proteins in 676 species: Archae - 38; Bacteria - 5948; Metazoa - 14528; Fungi - 7710; Plants - 4379; Viruses - 0; Other Eukaryotes - 4734 (source: NCBI BLink). & (gnl|cdd|35489 : 210.0) no description available & (gnl|cdd|29257 : 88.1) no description available & (reliability: 576.0) & (original description: Putative SOF1, Description = DDB1-and CUL4-associated factor 13, PFAM = PF00400;PF00400;PF00400)' T '27.1' 'RNA.processing' 'niben101scf01543_636848-643799' '(at5g53180 : 585.0) Encodes one of the two polypyrimidine tract-binding (PTB) protein homologs in the Arabidopsis genome. Double mutants have defects in pollen germination.; polypyrimidine tract-binding protein 2 (PTB2); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: pollen germination, regulation of RNA splicing, regulation of translation; LOCATED IN: nucleus, cytoplasmic mRNA processing body, cytoplasm; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: polypyrimidine tract-binding protein 1 (TAIR:AT3G01150.1); Has 1611 Blast hits to 972 proteins in 138 species: Archae - 0; Bacteria - 10; Metazoa - 1107; Fungi - 42; Plants - 324; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|36404 : 380.0) no description available & (reliability: 1170.0) & (original description: Putative PTB, Description = Polypyrimidine tract-binding-like protein, PFAM = PF00076;PF00076)' T '27.1' 'RNA.processing' 'niben101scf01629_12955-21420' '(at2g36660 : 498.0) polyadenylate-binding protein, putative / PABP, putative. Member of the class III family of PABP proteins.; poly(A) binding protein 7 (PAB7); CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 2 (TAIR:AT4G34110.1); Has 517049 Blast hits to 488607 proteins in 21541 species: Archae - 10464; Bacteria - 293370; Metazoa - 110143; Fungi - 18083; Plants - 34749; Viruses - 34404; Other Eukaryotes - 15836 (source: NCBI BLink). & (gnl|cdd|35345 : 370.0) no description available & (gnl|cdd|47820 : 98.8) no description available & (p19682|roc3_nicsy : 85.5) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (reliability: 996.0) & (original description: Putative PAB7, Description = Polyadenylate-binding protein 7, PFAM = PF00076;PF00076;PF00076;PF00076;PF00658)' T '27.1' 'RNA.processing' 'niben101scf01655_370077-380116' '(at1g01760 : 391.0) adenosine deaminases;RNA binding;RNA binding;adenosine deaminases; FUNCTIONS IN: RNA binding, adenosine deaminase activity; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Adenosine deaminase/editase (InterPro:IPR002466); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47853 : 270.0) no description available & (gnl|cdd|37988 : 242.0) no description available & (reliability: 782.0) & (original description: Putative BnaA10g00240D, Description = BnaA10g00240D protein, PFAM = PF02137)' T '27.1' 'RNA.processing' 'niben101scf01740_1785420-1795851' '(q43582|lsm4_tobac : 196.0) Probable U6 snRNA-associated Sm-like protein LSm4 (Glycine-rich protein 10) (GRP 10) - Nicotiana tabacum (Common tobacco) & (at5g27720 : 184.0) embryo defective 1644 (emb1644); CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649); BEST Arabidopsis thaliana protein match is: snRNP core protein SMD3 (TAIR:AT1G76300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29710 : 163.0) no description available & (gnl|cdd|38503 : 162.0) no description available & (reliability: 368.0) & (original description: Putative lsm4, Description = U6 snRNA-associated Sm-like protein LSm4, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben101scf01750_1382509-1393858' '(at1g08370 : 316.0) Encodes DCP1 involved in mRNA decapping. DCP1 forms a mRNA decapping complex with DCP2 (At5g13570) and VCS (VARICOSE) (At3g13300). However, unlike DCP2, DCP1 itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP2.; decapping 1 (DCP1); CONTAINS InterPro DOMAIN/s: Dcp1-like decapping (InterPro:IPR010334); Has 3561 Blast hits to 2917 proteins in 377 species: Archae - 4; Bacteria - 239; Metazoa - 1310; Fungi - 561; Plants - 741; Viruses - 142; Other Eukaryotes - 564 (source: NCBI BLink). & (gnl|cdd|38079 : 186.0) no description available & (gnl|cdd|69574 : 176.0) no description available & (reliability: 632.0) & (original description: Putative At1g08370, Description = mRNA-decapping enzyme-like protein, PFAM = PF06058)' T '27.1' 'RNA.processing' 'niben101scf01782_392457-415925' '(at3g09100 : 563.0) mRNA capping enzyme family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422), ATP dependent DNA ligase, central (InterPro:IPR012310), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme, C-terminal (InterPro:IPR013846); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT5G01290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37597 : 264.0) no description available & (gnl|cdd|85390 : 179.0) no description available & (reliability: 1070.0) & (original description: Putative At3g09100, Description = mRNA capping enzyme family protein, PFAM = PF01331;PF03919;PF00782)' T '27.1' 'RNA.processing' 'niben101scf01782_407200-410068' '(at5g01290 : 181.0) mRNA capping enzyme family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, protein tyrosine/serine/threonine phosphatase activity, mRNA guanylyltransferase activity, polynucleotide 5'-phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, mRNA processing, mRNA capping, dephosphorylation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme, C-terminal (InterPro:IPR013846); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT3G09100.2); Has 888 Blast hits to 860 proteins in 246 species: Archae - 0; Bacteria - 2; Metazoa - 276; Fungi - 241; Plants - 79; Viruses - 71; Other Eukaryotes - 219 (source: NCBI BLink). & (gnl|cdd|37597 : 158.0) no description available & (reliability: 362.0) & (original description: Putative pco130460, Description = mRNA-capping enzyme, PFAM = PF00782)' T '27.1' 'RNA.processing' 'niben101scf01782_583436-589298' '(at4g02840 : 160.0) Small nuclear ribonucleoprotein family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: nucleus, small nucleolar ribonucleoprotein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT3G07590.2). & (gnl|cdd|38638 : 136.0) no description available & (gnl|cdd|29711 : 129.0) no description available & (reliability: 320.0) & (original description: Putative SNRPD1, Description = Small nuclear ribonucleoprotein Sm D1, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben101scf01938_55692-58738' '(at4g31200 : 186.0) SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), SWAP/Surp (InterPro:IPR000061), RNA polymerase II, large subunit, CTD (InterPro:IPR006569); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative At4g31200, Description = AtIV20-like protein, PFAM = PF01805)' T '27.1' 'RNA.processing' 'niben101scf01966_265281-272164' '(at5g53180 : 591.0) Encodes one of the two polypyrimidine tract-binding (PTB) protein homologs in the Arabidopsis genome. Double mutants have defects in pollen germination.; polypyrimidine tract-binding protein 2 (PTB2); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: pollen germination, regulation of RNA splicing, regulation of translation; LOCATED IN: nucleus, cytoplasmic mRNA processing body, cytoplasm; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: polypyrimidine tract-binding protein 1 (TAIR:AT3G01150.1); Has 1611 Blast hits to 972 proteins in 138 species: Archae - 0; Bacteria - 10; Metazoa - 1107; Fungi - 42; Plants - 324; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|36404 : 390.0) no description available & (reliability: 1182.0) & (original description: Putative At5g53180, Description = Polypyrimidine tract-binding protein homolog 2, PFAM = PF00076;PF00076;PF00076)' T '27.1' 'RNA.processing' 'niben101scf02031_879320-881631' '(at3g26560 : 111.0) ATP-dependent RNA helicase, putative; FUNCTIONS IN: in 6 functions; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Domain of unknown function DUF1605 (InterPro:IPR011709), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G32490.2); Has 53052 Blast hits to 35825 proteins in 3176 species: Archae - 195; Bacteria - 13845; Metazoa - 17201; Fungi - 5520; Plants - 3365; Viruses - 1203; Other Eukaryotes - 11723 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative pea, Description = ATP-dependent RNA helicase DHX8, PFAM = )' T '27.1' 'RNA.processing' 'niben101scf02039_289520-292650' '(at1g04540 : 135.0) Calcium-dependent lipid-binding (CaLB domain) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT2G33320.1); Has 556 Blast hits to 454 proteins in 75 species: Archae - 0; Bacteria - 32; Metazoa - 92; Fungi - 46; Plants - 336; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative At1g04540, Description = T6K12.2 protein, PFAM = PF00168)' T '27.1' 'RNA.processing' 'niben101scf02054_219381-241732' '(at2g33320 : 177.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative At1g04540, Description = BnaA09g00140D protein, PFAM = PF00168)' T '27.1' 'RNA.processing' 'niben101scf02122_105417-109460' '(at3g49142 : 459.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G33990.1). & (q76c99|rf1_orysa : 91.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 910.0) & (original description: Putative ELI1, Description = Pentatricopeptide repeat-containing protein, PFAM = PF13041;PF14432;PF01535;PF01535;PF01535;PF01535)' T '27.1' 'RNA.processing' 'niben101scf02216_163117-168720' '(at5g26880 : 163.0) AGAMOUS-like 26; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537). & (gnl|cdd|30568 : 114.0) no description available & (reliability: 326.0) & (original description: Putative spoU, Description = Putative tRNA (cytidine(34)-2'-O)-methyltransferase, PFAM = PF00588)' T '27.1' 'RNA.processing' 'niben101scf02216_171102-178699' '(at3g52120 : 262.0) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SWAP/Surp (InterPro:IPR000061), D111/G-patch (InterPro:IPR000467); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36183 : 236.0) no description available & (reliability: 524.0) & (original description: Putative SF4, Description = Splicing factor 4, PFAM = PF01805;PF01585)' T '27.1' 'RNA.processing' 'niben101scf02293_12793-38557' '(at3g13300 : 926.0) Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development.; VARICOSE (VCS); FUNCTIONS IN: protein homodimerization activity, nucleotide binding; INVOLVED IN: mRNA catabolic process, deadenylation-independent decapping of nuclear-transcribed mRNA, leaf morphogenesis; LOCATED IN: cytosol, nucleus, cytoplasmic mRNA processing body; EXPRESSED IN: whole plant, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: varicose-related (TAIR:AT3G13290.1); Has 885 Blast hits to 799 proteins in 264 species: Archae - 2; Bacteria - 218; Metazoa - 230; Fungi - 185; Plants - 114; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|37127 : 668.0) no description available & (reliability: 1852.0) & (original description: Putative EDC4, Description = Varicose-related protein, PFAM = PF16529)' T '27.1' 'RNA.processing' 'niben101scf02344_434351-437639' '(at2g33320 : 172.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative At1g04540, Description = BnaA09g00140D protein, PFAM = PF00168)' T '27.1' 'RNA.processing' 'niben101scf02509_1244401-1250552' '(at5g26880 : 320.0) AGAMOUS-like 26; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537). & (gnl|cdd|30568 : 191.0) no description available & (reliability: 640.0) & (original description: Putative cspR, Description = Putative tRNA (cytidine(34)-2'-O)-methyltransferase, PFAM = PF00588)' T '27.1' 'RNA.processing' 'niben101scf02511_637776-644681' '(at5g53180 : 566.0) Encodes one of the two polypyrimidine tract-binding (PTB) protein homologs in the Arabidopsis genome. Double mutants have defects in pollen germination.; polypyrimidine tract-binding protein 2 (PTB2); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: pollen germination, regulation of RNA splicing, regulation of translation; LOCATED IN: nucleus, cytoplasmic mRNA processing body, cytoplasm; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: polypyrimidine tract-binding protein 1 (TAIR:AT3G01150.1); Has 1611 Blast hits to 972 proteins in 138 species: Archae - 0; Bacteria - 10; Metazoa - 1107; Fungi - 42; Plants - 324; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|36404 : 394.0) no description available & (reliability: 1132.0) & (original description: Putative RG9, Description = Polypyrimidine tract-binding protein, PFAM = PF13893;PF00076;PF00076)' T '27.1' 'RNA.processing' 'niben101scf02581_530899-537577' '(at1g09760 : 306.0) U2 small nuclear ribonucleoprotein A (U2A'); INVOLVED IN: nuclear mRNA splicing, via spliceosome, response to cold; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U2A'/phosphoprotein 32 family A, C-terminal (InterPro:IPR003603); Has 8109 Blast hits to 6297 proteins in 450 species: Archae - 0; Bacteria - 3635; Metazoa - 3194; Fungi - 303; Plants - 219; Viruses - 2; Other Eukaryotes - 756 (source: NCBI BLink). & (gnl|cdd|36857 : 253.0) no description available & (reliability: 612.0) & (original description: Putative lea1, Description = U2 small nuclear ribonucleoprotein A, PFAM = PF14580)' T '27.1' 'RNA.processing' 'niben101scf02601_323262-327271' '(at2g33320 : 223.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative At1g04540, Description = Putative ankyrin repeat-containing protein kinase A-like, PFAM = PF00168)' T '27.1' 'RNA.processing' 'niben101scf02606_678330-683212' '(at2g33320 : 160.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative At1g04540, Description = BnaA09g00140D protein, PFAM = PF00168)' T '27.1' 'RNA.processing' 'niben101scf02622_938268-953275' '(at3g52210 : 479.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mRNA capping; LOCATED IN: cellular_component unknown; EXPRESSED IN: synergid; CONTAINS InterPro DOMAIN/s: mRNA capping enzyme, large subunit (InterPro:IPR004971); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT3G20650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6k833|mces2_orysa : 426.0) mRNA cap guanine-N7 methyltransferase 2 (EC 2.1.1.56) (mRNA (guanine-N(7)-)-methyltransferase 2) (mRNA cap methyltransferase 2) - Oryza sativa (Rice) & (gnl|cdd|37186 : 139.0) no description available & (gnl|cdd|66934 : 129.0) no description available & (reliability: 958.0) & (original description: Putative At3g52210, Description = mRNA cap guanine-N7 methyltransferase 2, PFAM = PF03291)' T '27.1' 'RNA.processing' 'niben101scf02634_469412-481658' '(at3g11500 : 130.0) Small nuclear ribonucleoprotein family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: nucleolus, nucleus, small nucleolar ribonucleoprotein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: probable small nuclear ribonucleoprotein G (TAIR:AT2G23930.1); Has 1287 Blast hits to 1287 proteins in 269 species: Archae - 120; Bacteria - 0; Metazoa - 486; Fungi - 285; Plants - 213; Viruses - 0; Other Eukaryotes - 183 (source: NCBI BLink). & (p24715|ruxg_medsa : 122.0) Probable small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG) - Medicago sativa (Alfalfa) & (gnl|cdd|29706 : 107.0) no description available & (gnl|cdd|36991 : 98.8) no description available & (reliability: 260.0) & (original description: Putative smg1, Description = Small nuclear ribonucleoprotein G, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben101scf02639_452099-459510' '(at1g28060 : 588.0) Pre-mRNA-splicing factor 3; CONTAINS InterPro DOMAIN/s: Pre-mRNA-splicing factor 3 (InterPro:IPR013881); BEST Arabidopsis thaliana protein match is: Pre-mRNA-splicing factor 3 (TAIR:AT3G55930.1); Has 22923 Blast hits to 12760 proteins in 707 species: Archae - 18; Bacteria - 1085; Metazoa - 11525; Fungi - 3053; Plants - 1999; Viruses - 93; Other Eukaryotes - 5150 (source: NCBI BLink). & (gnl|cdd|71998 : 376.0) no description available & (gnl|cdd|37980 : 358.0) no description available & (reliability: 1176.0) & (original description: Putative PRP3, Description = U4/U6 small nuclear ribonucleoprotein PRP3, PFAM = PF06544;PF08572)' T '27.1' 'RNA.processing' 'niben101scf02653_429310-449894' '(at5g05970 : 672.0) a WD40 repeat protein related to the animal NEDD1/GCP-WD protein, which interacts with the g-tubulin complex. Plays a critical role in MT organization during mitosis; NEURAL PRECURSOR CELL EXPRESSED, DEVELOPMENTALLY DOWN-REGULATED GENE 1 (NEDD1); FUNCTIONS IN: nucleotide binding; INVOLVED IN: in 6 processes; LOCATED IN: kinetochore microtubule, CUL4 RING ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39579 : 414.0) no description available & (gnl|cdd|29257 : 116.0) no description available & (reliability: 1344.0) & (original description: Putative NEDD1, Description = Protein NEDD1, PFAM = PF00400)' T '27.1' 'RNA.processing' 'niben101scf02706_288111-292412' '(at2g25290 : 572.0) Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein (TAIR:AT4G32070.1). & (gnl|cdd|39354 : 477.0) no description available & (reliability: 1144.0) & (original description: Putative BnaC07g43660D, Description = BnaC07g43660D protein, PFAM = PF00564;PF13181)' T '27.1' 'RNA.processing' 'niben101scf02864_938742-951176' '(at1g20580 : 191.0) Small nuclear ribonucleoprotein family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: nucleolus, nucleus, small nucleolar ribonucleoprotein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: snRNP core protein SMD3 (TAIR:AT1G76300.1); Has 1253 Blast hits to 1253 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 480; Fungi - 336; Plants - 223; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|38382 : 168.0) no description available & (gnl|cdd|29708 : 131.0) no description available & (reliability: 382.0) & (original description: Putative SMD3B, Description = Small nuclear ribonucleoprotein SmD3b, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben101scf02914_96378-98902' '(gnl|cdd|37785 : 127.0) no description available & (at1g60170 : 126.0) embryo defective 1220 (emb1220); CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOSIC (InterPro:IPR012976), Prp31 C-terminal (InterPro:IPR019175); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70400.1); Has 1596 Blast hits to 1590 proteins in 356 species: Archae - 207; Bacteria - 2; Metazoa - 385; Fungi - 430; Plants - 224; Viruses - 0; Other Eukaryotes - 348 (source: NCBI BLink). & (gnl|cdd|85685 : 93.0) no description available & (reliability: 252.0) & (original description: Putative emb1220, Description = U4/U6 small nuclear ribonucleoprotein Prp31, PFAM = PF01798)' T '27.1' 'RNA.processing' 'niben101scf02922_320974-324695' '(at2g02980 : 447.0) Encodes a chloroplast RNA editing factor.; ORGANELLE TRANSCRIPT PROCESSING 85 (OTP85); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G66520.1); Has 39959 Blast hits to 14548 proteins in 281 species: Archae - 3; Bacteria - 7; Metazoa - 132; Fungi - 233; Plants - 38891; Viruses - 0; Other Eukaryotes - 693 (source: NCBI BLink). & (q76c99|rf1_orysa : 92.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 828.0) & (original description: Putative crr2, Description = Organelle transcript processing 82, PFAM = PF13041;PF13041;PF14432;PF01535;PF01535)' T '27.1' 'RNA.processing' 'niben101scf03098_38816-42693' '(at2g45350 : 705.0) Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-E subfamily) with 11 pentatricopeptide (PPR) repeats. The protein is involved in RNA editing of the initiation codon of ndhD in the chloroplast.; CHLORORESPIRATORY REDUCTION 4 (CRR4); INVOLVED IN: mRNA modification; LOCATED IN: chloroplast, vacuole; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G02750.1); Has 36388 Blast hits to 13274 proteins in 208 species: Archae - 0; Bacteria - 3; Metazoa - 67; Fungi - 16; Plants - 35908; Viruses - 0; Other Eukaryotes - 394 (source: NCBI BLink). & (q76c99|rf1_orysa : 97.8) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1410.0) & (original description: Putative CRR4, Description = Pentatricopeptide repeat-containing protein At2g45350, chloroplastic, PFAM = PF13041;PF13041;PF13041;PF12854;PF01535;PF01535;PF01535;PF01535;PF01535)' T '27.1' 'RNA.processing' 'niben101scf03114_1006887-1012954' '(at4g25630 : 446.0) encodes a fibrillarin, a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA, U60.2f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated.; fibrillarin 2 (FIB2); FUNCTIONS IN: snoRNA binding; INVOLVED IN: response to salt stress, RNA methylation, rRNA processing; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fibrillarin (InterPro:IPR000692); BEST Arabidopsis thaliana protein match is: fibrillarin 1 (TAIR:AT5G52470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36809 : 440.0) no description available & (gnl|cdd|85352 : 392.0) no description available & (reliability: 886.0) & (original description: Putative MED36B, Description = Probable mediator of RNA polymerase II transcription subunit 36b, PFAM = PF01269)' T '27.1' 'RNA.processing' 'niben101scf03221_322817-330082' '(at2g18740 : 144.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT4G30330.1); Has 429 Blast hits to 429 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 172; Fungi - 98; Plants - 81; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (gnl|cdd|36985 : 135.0) no description available & (gnl|cdd|29705 : 129.0) no description available & (reliability: 288.0) & (original description: Putative SNRPE, Description = Small nuclear ribonucleoprotein E, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben101scf03223_161613-201867' '(at4g34110 : 654.0) Putative poly-A binding protein. Member of a gene family .Expressed in stele and root meristem and post-fertilization ovules.Member of the class II family of PABP proteins.; poly(A) binding protein 2 (PAB2); FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: response to salt stress, translational initiation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Paraneoplastic encephalomyelitis antigen (InterPro:IPR002343), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 (TAIR:AT1G49760.2); Has 987994 Blast hits to 947802 proteins in 35008 species: Archae - 20430; Bacteria - 568582; Metazoa - 213912; Fungi - 30250; Plants - 62241; Viruses - 64851; Other Eukaryotes - 27728 (source: NCBI BLink). & (gnl|cdd|35345 : 443.0) no description available & (gnl|cdd|31068 : 103.0) no description available & (p19683|roc4_nicsy : 92.4) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 1308.0) & (original description: Putative Pabpc4, Description = Polyadenylate-binding protein, PFAM = PF00658;PF00076;PF00076;PF00076;PF00076)' T '27.1' 'RNA.processing' 'niben101scf03227_139266-261171' '(at3g03710 : 1151.0) Encodes a chloroplast polynucleotide phosphorylase (PNPase). Involved in response to phosphorus (P) starvation. Mutants impaired in the expression of this gene have been selected through their resistance to fosmidomycin, a strong inhibitor of DXR, an enzyme of the methylerythritol-dependent IPP biosynthesis pathway. The pathway enzymes were upregulated in the mutant seedlings.; resistant to inhibition with FSM 10 (RIF10); FUNCTIONS IN: polyribonucleotide nucleotidyltransferase activity, 3'-5'-exoribonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: chlorophyll biosynthetic process, cellular response to phosphate starvation, xanthophyll biosynthetic process, carotene biosynthetic process, negative regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type (InterPro:IPR015848), K Homology (InterPro:IPR004087), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), K Homology, type 1 (InterPro:IPR004088), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Polyribonucleotide nucleotidyltransferase (InterPro:IPR012162); BEST Arabidopsis thaliana protein match is: polyribonucleotide nucleotidyltransferase, putative (TAIR:AT5G14580.1); Has 29137 Blast hits to 25785 proteins in 2865 species: Archae - 377; Bacteria - 19207; Metazoa - 333; Fungi - 67; Plants - 272; Viruses - 0; Other Eukaryotes - 8881 (source: NCBI BLink). & (gnl|cdd|83994 : 864.0) no description available & (gnl|cdd|36285 : 842.0) no description available & (reliability: 2302.0) & (original description: Putative pnp, Description = Polynucleotide phosphorylase, PFAM = PF00013;PF03725;PF01138;PF01138;PF00575)' T '27.1' 'RNA.processing' 'niben101scf03405_507267-511282' '(at3g46790 : 897.0) Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-H subfamily) with 9 pentatricopeptide (PPR) repeats. The protein is involved the intergenic processing of chloroplast RNA between rps7 and ndhB, which is essential for ndhB translation.; CHLORORESPIRATORY REDUCTION 2 (CRR2); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 36401 Blast hits to 13536 proteins in 261 species: Archae - 0; Bacteria - 8; Metazoa - 92; Fungi - 72; Plants - 35786; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink). & (q76c99|rf1_orysa : 86.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1794.0) & (original description: Putative crr2, Description = Chlororespiratory reduction 2, PFAM = PF01535;PF01535;PF13041;PF13041;PF14432)' T '27.1' 'RNA.processing' 'niben101scf03410_118469-133705' '(gnl|cdd|38670 : 131.0) no description available & (gnl|cdd|29717 : 126.0) no description available & (at1g76860 : 123.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT1G21190.1); Has 1289 Blast hits to 1289 proteins in 302 species: Archae - 306; Bacteria - 0; Metazoa - 397; Fungi - 221; Plants - 178; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative LSM3B, Description = Sm-like protein LSM3B, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben101scf03469_518113-533826' '(at4g14790 : 720.0) encodes a nuclear-encoded DExH box RNA helicase, which is localized to mitochondria and whose in vitro ATPase activity is stimulated with mitochondrial RNA.; ATSUV3; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DNA/RNA helicase, C-terminal (InterPro:IPR001650); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial, putative (TAIR:AT5G39840.1); Has 3666 Blast hits to 3643 proteins in 672 species: Archae - 20; Bacteria - 977; Metazoa - 276; Fungi - 353; Plants - 117; Viruses - 18; Other Eukaryotes - 1905 (source: NCBI BLink). & (gnl|cdd|36171 : 595.0) no description available & (reliability: 1440.0) & (original description: Putative SUV3, Description = ATP-dependent RNA helicase SUV3, mitochondrial, PFAM = PF00271;PF12513)' T '27.1' 'RNA.processing' 'niben101scf03481_94883-105799' '(at2g36660 : 530.0) polyadenylate-binding protein, putative / PABP, putative. Member of the class III family of PABP proteins.; poly(A) binding protein 7 (PAB7); CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 2 (TAIR:AT4G34110.1); Has 517049 Blast hits to 488607 proteins in 21541 species: Archae - 10464; Bacteria - 293370; Metazoa - 110143; Fungi - 18083; Plants - 34749; Viruses - 34404; Other Eukaryotes - 15836 (source: NCBI BLink). & (gnl|cdd|35345 : 353.0) no description available & (gnl|cdd|64519 : 93.1) no description available & (p28644|roc1_spiol : 87.0) 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) & (reliability: 1060.0) & (original description: Putative PAB7, Description = Polyadenylate-binding protein 7, PFAM = PF00076;PF00076;PF00076;PF00076;PF00658)' T '27.1' 'RNA.processing' 'niben101scf03526_198627-202891' '(at2g33320 : 199.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative At1g04540, Description = Putative ankyrin repeat-containing protein kinase A-like, PFAM = PF00168)' T '27.1' 'RNA.processing' 'niben101scf03597_1121-7995' '(at5g55100 : 277.0) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147), SWAP/Surp (InterPro:IPR000061); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37058 : 247.0) no description available & (reliability: 554.0) & (original description: Putative PGSC0003DMG400014387, Description = Splicing factor, suppressor of white-apricot-like protein, PFAM = PF01805;PF01805;PF09750)' T '27.1' 'RNA.processing' 'niben101scf03673_473301-493332' '(at2g17580 : 408.0) Polynucleotide adenylyltransferase family protein; FUNCTIONS IN: RNA binding, nucleotidyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Poly A polymerase, head domain (InterPro:IPR002646); BEST Arabidopsis thaliana protein match is: Polynucleotide adenylyltransferase family protein (TAIR:AT1G28090.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37370 : 227.0) no description available & (gnl|cdd|30962 : 159.0) no description available & (reliability: 816.0) & (original description: Putative Os03g0131400, Description = Os03g0131400 protein, PFAM = PF12627;PF01743)' T '27.1' 'RNA.processing' 'niben101scf03735_429929-438597' '(at1g20580 : 191.0) Small nuclear ribonucleoprotein family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: nucleolus, nucleus, small nucleolar ribonucleoprotein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: snRNP core protein SMD3 (TAIR:AT1G76300.1); Has 1253 Blast hits to 1253 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 480; Fungi - 336; Plants - 223; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|38382 : 168.0) no description available & (gnl|cdd|29708 : 131.0) no description available & (reliability: 382.0) & (original description: Putative v1g86522, Description = Predicted protein, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben101scf03751_115873-122163' '(at4g34110 : 620.0) Putative poly-A binding protein. Member of a gene family .Expressed in stele and root meristem and post-fertilization ovules.Member of the class II family of PABP proteins.; poly(A) binding protein 2 (PAB2); FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: response to salt stress, translational initiation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Paraneoplastic encephalomyelitis antigen (InterPro:IPR002343), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 (TAIR:AT1G49760.2); Has 987994 Blast hits to 947802 proteins in 35008 species: Archae - 20430; Bacteria - 568582; Metazoa - 213912; Fungi - 30250; Plants - 62241; Viruses - 64851; Other Eukaryotes - 27728 (source: NCBI BLink). & (gnl|cdd|35345 : 433.0) no description available & (gnl|cdd|47687 : 90.3) no description available & (p28644|roc1_spiol : 82.4) 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) & (reliability: 1240.0) & (original description: Putative APP1, Description = PABP, PFAM = PF00076;PF00076;PF00076;PF00076)' T '27.1' 'RNA.processing' 'niben101scf03965_1535-25320' '(at3g09100 : 828.0) mRNA capping enzyme family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422), ATP dependent DNA ligase, central (InterPro:IPR012310), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme, C-terminal (InterPro:IPR013846); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT5G01290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37597 : 343.0) no description available & (gnl|cdd|85390 : 229.0) no description available & (reliability: 1556.0) & (original description: Putative RNGTT, Description = mRNA-capping enzyme, PFAM = PF03919;PF01331;PF00782)' T '27.1' 'RNA.processing' 'niben101scf04007_261746-267860' '(at1g49760 : 806.0) polyadenylate-binding protein, putative / PABP, putative, similar to poly(A)-binding protein GB:AAF66825 GI:7673359 from (Nicotiana tabacum). Highly and ubiquitously expressed. Member of the class II PABP family.; poly(A) binding protein 8 (PAB8); CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 2 (TAIR:AT4G34110.1). & (gnl|cdd|35345 : 439.0) no description available & (gnl|cdd|64519 : 104.0) no description available & (p28644|roc1_spiol : 89.0) 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) & (reliability: 1612.0) & (original description: Putative PAB4, Description = Polyadenylate-binding protein 4, PFAM = PF00076;PF00076;PF00076;PF00076;PF00658)' T '27.1' 'RNA.processing' 'niben101scf04119_127530-138733' '(at1g59760 : 1432.0) RNA helicase, ATP-dependent, SK12/DOB1 protein; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT2G06990.1); Has 9909 Blast hits to 8438 proteins in 1290 species: Archae - 828; Bacteria - 3072; Metazoa - 1170; Fungi - 1231; Plants - 476; Viruses - 32; Other Eukaryotes - 3100 (source: NCBI BLink). & (gnl|cdd|36166 : 1351.0) no description available & (gnl|cdd|34219 : 771.0) no description available & (reliability: 2864.0) & (original description: Putative MTR4, Description = DExH-box ATP-dependent RNA helicase DExH9, PFAM = PF08148;PF00271;PF13234;PF00270)' T '27.1' 'RNA.processing' 'niben101scf04217_1155676-1158410' '(at5g08510 : 169.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G44230.1); Has 37926 Blast hits to 14003 proteins in 252 species: Archae - 2; Bacteria - 4; Metazoa - 48; Fungi - 107; Plants - 37187; Viruses - 0; Other Eukaryotes - 578 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative PGSC0003DMG400024200, Description = JMS10C05.1 protein, PFAM = PF13041)' T '27.1' 'RNA.processing' 'niben101scf04233_6866-17045' '(at5g46420 : 569.0) 16S rRNA processing protein RimM family; FUNCTIONS IN: ribosome binding, nucleotidyltransferase activity; INVOLVED IN: metabolic process, rRNA processing, ribosome biogenesis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PRC-barrel (InterPro:IPR007903), UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618), RimM protein (InterPro:IPR002676), 16S rRNA processing protein RimM (InterPro:IPR011961); BEST Arabidopsis thaliana protein match is: N-acetylglucosamine-1-phosphate uridylyltransferase 1 (TAIR:AT1G31070.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80530 : 167.0) no description available & (gnl|cdd|37599 : 136.0) no description available & (reliability: 1138.0) & (original description: Putative rimM, Description = Ribosome maturation factor RimM, PFAM = PF01782;PF05239)' T '27.1' 'RNA.processing' 'niben101scf04292_1374709-1389671' '(at2g03870 : 158.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: U6 snRNA-associated Sm-like protein LSm7 (InterPro:IPR017132), Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: probable small nuclear ribonucleoprotein G (TAIR:AT2G23930.1); Has 1450 Blast hits to 1450 proteins in 289 species: Archae - 222; Bacteria - 0; Metazoa - 489; Fungi - 323; Plants - 216; Viruses - 0; Other Eukaryotes - 200 (source: NCBI BLink). & (gnl|cdd|36992 : 147.0) no description available & (gnl|cdd|29716 : 127.0) no description available & (reliability: 316.0) & (original description: Putative LSM7, Description = Sm-like protein LSM7, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben101scf04396_108630-125986' '(at3g05040 : 1399.0) Encodes member of importin/exportin family. Involved in timing of shoot maturation. Involved in miRNA transport. Mutants flower early and have small, curled leaves and reduced abundance of certain miRNA species.; HASTY (HST); CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); Has 520 Blast hits to 417 proteins in 141 species: Archae - 0; Bacteria - 0; Metazoa - 205; Fungi - 183; Plants - 102; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|37231 : 137.0) no description available & (gnl|cdd|87516 : 100.0) no description available & (reliability: 2798.0) & (original description: Putative HST1, Description = Protein HASTY 1, PFAM = PF08389)' T '27.1' 'RNA.processing' 'niben101scf04403_33382-47713' '(gnl|cdd|36142 : 565.0) no description available & (at1g26370 : 504.0) RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), ATPase, AAA+ type, core (InterPro:IPR003593), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 9899 Blast hits to 9180 proteins in 1561 species: Archae - 2; Bacteria - 3369; Metazoa - 2309; Fungi - 1230; Plants - 848; Viruses - 465; Other Eukaryotes - 1676 (source: NCBI BLink). & (gnl|cdd|31829 : 440.0) no description available & (reliability: 914.0) & (original description: Putative splh1, Description = DEAH-box nuclear pre-mRNA splicing factor, PFAM = PF00271;PF07717;PF04408)' T '27.1' 'RNA.processing' 'niben101scf04558_131357-135215' '(at1g65700 : 161.0) Small nuclear ribonucleoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, small nucleolar ribonucleoprotein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649). & (gnl|cdd|36995 : 135.0) no description available & (gnl|cdd|29714 : 107.0) no description available & (reliability: 322.0) & (original description: Putative LSM8, Description = Sm-like protein LSM8, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben101scf04989_104617-122361' '(at5g53770 : 535.0) Nucleotidyltransferase family protein; FUNCTIONS IN: nucleic acid binding, nucleotidyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), PAP/25A-associated (InterPro:IPR002058); BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT4G00060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37117 : 295.0) no description available & (gnl|cdd|34857 : 197.0) no description available & (reliability: 1070.0) & (original description: Putative BnaC09g30200D, Description = BnaC09g30200D protein, PFAM = PF01909;PF03828)' T '27.1' 'RNA.processing' 'niben101scf05057_132685-138486' '(at1g22760 : 600.0) Putative poly(A) binding protein May there fore function in posttranscriptional regulation, including mRNA turnover and translational initiation. Expression detected only in floral organs.; poly(A) binding protein 3 (PAB3); CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A)-binding protein 5 (TAIR:AT1G71770.2); Has 52215 Blast hits to 23458 proteins in 902 species: Archae - 22; Bacteria - 3112; Metazoa - 26727; Fungi - 6853; Plants - 9433; Viruses - 0; Other Eukaryotes - 6068 (source: NCBI BLink). & (gnl|cdd|35345 : 406.0) no description available & (gnl|cdd|31068 : 107.0) no description available & (p19683|roc4_nicsy : 88.2) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 1200.0) & (original description: Putative PAB5, Description = Polyadenylate-binding protein 5, PFAM = PF00076;PF00076;PF00076;PF00076;PF00658)' T '27.1' 'RNA.processing' 'niben101scf05060_762985-770546' '(at3g01150 : 575.0) Encodes one of the two polypyrimidine tract-binding (PTB) protein homologs in the Arabidopsis genome. Double mutants have defects in pollen germination.; POLYPYRIMIDINE TRACT-BINDING (PTB); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: pollen germination, regulation of RNA splicing, regulation of translation; LOCATED IN: nucleus, cytoplasmic mRNA processing body, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: polypyrimidine tract-binding protein 2 (TAIR:AT5G53180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36404 : 358.0) no description available & (reliability: 1150.0) & (original description: Putative PTB, Description = Polypyrimidine tract-binding protein homolog 1, PFAM = PF13893;PF13893;PF00076)' T '27.1' 'RNA.processing' 'niben101scf05071_88972-95218' '(at3g62840 : 181.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT2G47640.3); Has 794 Blast hits to 794 proteins in 230 species: Archae - 2; Bacteria - 0; Metazoa - 329; Fungi - 181; Plants - 143; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (gnl|cdd|29707 : 155.0) no description available & (gnl|cdd|38669 : 142.0) no description available & (reliability: 362.0) & (original description: Putative smd2, Description = Small nuclear ribonucleoprotein Sm D2, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben101scf05233_76265-94933' '(at4g03120 : 97.8) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, U1-C type (InterPro:IPR013085), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type matrin (InterPro:IPR000690); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87045 : 81.5) no description available & (gnl|cdd|38664 : 80.5) no description available & (reliability: 195.6) & (original description: Putative snrpC, Description = U1 small nuclear ribonucleoprotein C, PFAM = PF06220)' T '27.1' 'RNA.processing' 'niben101scf05283_26003-34441' '(at4g05410 : 481.0) Encodes a nucleolar protein with seven WD40-repeats that plays a role in embryo sac development and is critical for the correct positioning of the division plane of zygote and the apical cell lineage in Arabidopsis. YAO may act by modulating nucleolar function, such as rRNA biogenesis, during early embryogenesis and gametogenesis.; YAOZHE (YAO); FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: acceptance of pollen, mitochondrial fission, embryo sac development, embryo development ending in seed dormancy; LOCATED IN: nucleolus, anaphase-promoting complex, small nucleolar ribonucleoprotein complex, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G21130.1); Has 47131 Blast hits to 24802 proteins in 761 species: Archae - 50; Bacteria - 6358; Metazoa - 18156; Fungi - 10195; Plants - 5539; Viruses - 94; Other Eukaryotes - 6739 (source: NCBI BLink). & (gnl|cdd|35520 : 457.0) no description available & (gnl|cdd|29257 : 142.0) no description available & (o24076|gblp_medsa : 87.0) Guanine nucleotide-binding protein subunit beta-like protein - Medicago sativa (Alfalfa) & (reliability: 940.0) & (original description: Putative YAO, Description = U3 snoRNP-associated protein-like YAO, PFAM = PF00400;PF00400;PF00400)' T '27.1' 'RNA.processing' 'niben101scf05402_184671-195661' '(at1g03530 : 224.0) nuclear assembly factor 1 (NAF1); FUNCTIONS IN: snoRNA binding, pseudouridine synthase activity; INVOLVED IN: biological_process unknown; LOCATED IN: box H/ACA snoRNP complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 (InterPro:IPR007504); Has 55446 Blast hits to 31211 proteins in 1683 species: Archae - 434; Bacteria - 10062; Metazoa - 16821; Fungi - 8873; Plants - 3938; Viruses - 821; Other Eukaryotes - 14497 (source: NCBI BLink). & (gnl|cdd|37447 : 178.0) no description available & (gnl|cdd|69038 : 166.0) no description available & (reliability: 448.0) & (original description: Putative NAF1, Description = H/ACA ribonucleoprotein complex non-core subunit NAF1, PFAM = PF04410)' T '27.1' 'RNA.processing' 'niben101scf05458_97915-101372' '(at1g50270 : 301.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT2G13600.1); Has 37475 Blast hits to 13706 proteins in 234 species: Archae - 0; Bacteria - 8; Metazoa - 62; Fungi - 67; Plants - 36828; Viruses - 0; Other Eukaryotes - 510 (source: NCBI BLink). & (q76c99|rf1_orysa : 80.9) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 564.0) & (original description: Putative PGSC0003DMG400008944, Description = Putative uncharacterized protein Sb06g020256, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041)' T '27.1' 'RNA.processing' 'niben101scf05467_504507-507599' '(at4g34110 : 361.0) Putative poly-A binding protein. Member of a gene family .Expressed in stele and root meristem and post-fertilization ovules.Member of the class II family of PABP proteins.; poly(A) binding protein 2 (PAB2); FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: response to salt stress, translational initiation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Paraneoplastic encephalomyelitis antigen (InterPro:IPR002343), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 (TAIR:AT1G49760.2); Has 987994 Blast hits to 947802 proteins in 35008 species: Archae - 20430; Bacteria - 568582; Metazoa - 213912; Fungi - 30250; Plants - 62241; Viruses - 64851; Other Eukaryotes - 27728 (source: NCBI BLink). & (gnl|cdd|35345 : 195.0) no description available & (gnl|cdd|47687 : 87.6) no description available & (reliability: 722.0) & (original description: Putative pabp1, Description = PABP, PFAM = PF00076;PF00076)' T '27.1' 'RNA.processing' 'niben101scf05697_256333-298876' '(q6k833|mces2_orysa : 130.0) mRNA cap guanine-N7 methyltransferase 2 (EC 2.1.1.56) (mRNA (guanine-N(7)-)-methyltransferase 2) (mRNA cap methyltransferase 2) - Oryza sativa (Rice) & (at3g52210 : 119.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mRNA capping; LOCATED IN: cellular_component unknown; EXPRESSED IN: synergid; CONTAINS InterPro DOMAIN/s: mRNA capping enzyme, large subunit (InterPro:IPR004971); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT3G20650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative At3g52210, Description = S-adenosyl-L-methionine-dependent methyltransferase superfamily protein, PFAM = PF03291)' T '27.1' 'RNA.processing' 'niben101scf05697_256583-265454' '(at3g52210 : 434.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mRNA capping; LOCATED IN: cellular_component unknown; EXPRESSED IN: synergid; CONTAINS InterPro DOMAIN/s: mRNA capping enzyme, large subunit (InterPro:IPR004971); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT3G20650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6k833|mces2_orysa : 384.0) mRNA cap guanine-N7 methyltransferase 2 (EC 2.1.1.56) (mRNA (guanine-N(7)-)-methyltransferase 2) (mRNA cap methyltransferase 2) - Oryza sativa (Rice) & (gnl|cdd|37186 : 127.0) no description available & (gnl|cdd|66934 : 118.0) no description available & (reliability: 868.0) & (original description: Putative At3g52210, Description = mRNA cap guanine-N7 methyltransferase 2, PFAM = PF03291)' T '27.1' 'RNA.processing' 'niben101scf05764_448597-457358' '(at5g66360 : 355.0) Ribosomal RNA adenine dimethylase family protein; FUNCTIONS IN: rRNA methyltransferase activity, rRNA (adenine-N6,N6-)-dimethyltransferase activity, rRNA (adenine) methyltransferase activity; INVOLVED IN: rRNA modification, rRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA adenine methylase transferase, N-terminal (InterPro:IPR020598), Ribosomal RNA adenine dimethylase (InterPro:IPR011530), Ribosomal RNA adenine methylase transferase, conserved site (InterPro:IPR020596), Ribosomal RNA adenine methylase transferase (InterPro:IPR001737); BEST Arabidopsis thaliana protein match is: Ribosomal RNA adenine dimethylase family protein (TAIR:AT2G47420.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36038 : 254.0) no description available & (gnl|cdd|30380 : 218.0) no description available & (reliability: 710.0) & (original description: Putative DIM1B, Description = Ribosomal RNA small subunit methyltransferase, mitochondrial, PFAM = PF00398)' T '27.1' 'RNA.processing' 'niben101scf05767_19296-27688' '(at5g23690 : 586.0) Polynucleotide adenylyltransferase family protein; FUNCTIONS IN: RNA binding, nucleotidyltransferase activity; INVOLVED IN: RNA processing; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Poly A polymerase, head domain (InterPro:IPR002646); BEST Arabidopsis thaliana protein match is: polynucleotide adenylyltransferase family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G48830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37370 : 365.0) no description available & (gnl|cdd|30962 : 193.0) no description available & (reliability: 1172.0) & (original description: Putative At5g23690, Description = Polynucleotide adenylyltransferase family protein, PFAM = PF01743;PF12627)' T '27.1' 'RNA.processing' 'niben101scf06087_459921-465736' '(at1g76860 : 149.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT1G21190.1); Has 1289 Blast hits to 1289 proteins in 302 species: Archae - 306; Bacteria - 0; Metazoa - 397; Fungi - 221; Plants - 178; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|38670 : 130.0) no description available & (gnl|cdd|29717 : 126.0) no description available & (reliability: 298.0) & (original description: Putative lsm3, Description = Probable U6 snRNA-associated Sm-like protein LSm3, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben101scf06157_210825-217217' '(gnl|cdd|37785 : 613.0) no description available & (at1g60170 : 532.0) embryo defective 1220 (emb1220); CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOSIC (InterPro:IPR012976), Prp31 C-terminal (InterPro:IPR019175); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70400.1); Has 1596 Blast hits to 1590 proteins in 356 species: Archae - 207; Bacteria - 2; Metazoa - 385; Fungi - 430; Plants - 224; Viruses - 0; Other Eukaryotes - 348 (source: NCBI BLink). & (gnl|cdd|31687 : 207.0) no description available & (reliability: 1064.0) & (original description: Putative spl5, Description = U4/U6 small nuclear ribonucleoprotein, PFAM = PF01798;PF09785)' T '27.1' 'RNA.processing' 'niben101scf06183_496000-498976' '(at1g14650 : 154.0) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: RNA processing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SWAP/Surp (InterPro:IPR000061), Ubiquitin (InterPro:IPR000626), Pre-mRNA splicing factor PRP21 like protein (InterPro:IPR022030), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: SWAP (Suppressor-of-White-APricot)/surp domain-containing protein (TAIR:AT1G14640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29202 : 100.0) no description available & (reliability: 308.0) & (original description: Putative dl3830c, Description = Putative splicing factor 3A subunit 1, PFAM = PF00240)' T '27.1' 'RNA.processing' 'niben101scf06344_145269-155387' '(at4g34110 : 629.0) Putative poly-A binding protein. Member of a gene family .Expressed in stele and root meristem and post-fertilization ovules.Member of the class II family of PABP proteins.; poly(A) binding protein 2 (PAB2); FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: response to salt stress, translational initiation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Paraneoplastic encephalomyelitis antigen (InterPro:IPR002343), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 (TAIR:AT1G49760.2); Has 987994 Blast hits to 947802 proteins in 35008 species: Archae - 20430; Bacteria - 568582; Metazoa - 213912; Fungi - 30250; Plants - 62241; Viruses - 64851; Other Eukaryotes - 27728 (source: NCBI BLink). & (gnl|cdd|35345 : 427.0) no description available & (gnl|cdd|64519 : 103.0) no description available & (p19683|roc4_nicsy : 82.0) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 1258.0) & (original description: Putative PAB8, Description = Polyadenylate-binding protein 8, PFAM = PF00076;PF00076;PF00076;PF00076;PF00076;PF00658)' T '27.1' 'RNA.processing' 'niben101scf06404_48937-61109' '(at2g45620 : 617.0) Nucleotidyltransferase family protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), PAP/25A-associated (InterPro:IPR002058); BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT3G45750.1); Has 1962 Blast hits to 1846 proteins in 232 species: Archae - 0; Bacteria - 9; Metazoa - 921; Fungi - 372; Plants - 185; Viruses - 0; Other Eukaryotes - 475 (source: NCBI BLink). & (gnl|cdd|34857 : 182.0) no description available & (gnl|cdd|37488 : 175.0) no description available & (reliability: 1234.0) & (original description: Putative URT1, Description = UTP:RNA uridylyltransferase 1, PFAM = PF03828;PF01909)' T '27.1' 'RNA.processing' 'niben101scf07155_410371-413265' '(at1g43190 : 134.0) polypyrimidine tract-binding protein 3 (PTB3); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: regulation of RNA splicing, regulation of translation; LOCATED IN: nucleus, cytoplasmic mRNA processing body, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), HnRNP-L/PTB/hephaestus splicing factor (InterPro:IPR006536), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: polypyrimidine tract-binding protein 1 (TAIR:AT3G01150.1); Has 2368 Blast hits to 1946 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 1467; Fungi - 40; Plants - 582; Viruses - 0; Other Eukaryotes - 279 (source: NCBI BLink). & (gnl|cdd|36404 : 98.2) no description available & (reliability: 268.0) & (original description: Putative ptb, Description = Polypyrimidine tract-binding-like protein, PFAM = )' T '27.1' 'RNA.processing' 'niben101scf07227_257238-264464' '(at1g28060 : 582.0) Pre-mRNA-splicing factor 3; CONTAINS InterPro DOMAIN/s: Pre-mRNA-splicing factor 3 (InterPro:IPR013881); BEST Arabidopsis thaliana protein match is: Pre-mRNA-splicing factor 3 (TAIR:AT3G55930.1); Has 22923 Blast hits to 12760 proteins in 707 species: Archae - 18; Bacteria - 1085; Metazoa - 11525; Fungi - 3053; Plants - 1999; Viruses - 93; Other Eukaryotes - 5150 (source: NCBI BLink). & (gnl|cdd|71998 : 373.0) no description available & (gnl|cdd|37980 : 353.0) no description available & (reliability: 1164.0) & (original description: Putative PRP3, Description = U4/U6 small nuclear ribonucleoprotein PRP3, PFAM = PF08572;PF06544)' T '27.1' 'RNA.processing' 'niben101scf07400_19761-36915' '(at1g59760 : 1389.0) RNA helicase, ATP-dependent, SK12/DOB1 protein; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT2G06990.1); Has 9909 Blast hits to 8438 proteins in 1290 species: Archae - 828; Bacteria - 3072; Metazoa - 1170; Fungi - 1231; Plants - 476; Viruses - 32; Other Eukaryotes - 3100 (source: NCBI BLink). & (gnl|cdd|36166 : 1294.0) no description available & (gnl|cdd|34219 : 749.0) no description available & (reliability: 2778.0) & (original description: Putative MTR4, Description = DExH-box ATP-dependent RNA helicase DExH9, PFAM = PF08148;PF13234;PF00271;PF00270)' T '27.1' 'RNA.processing' 'niben101scf07493_370700-377462' '(at1g49760 : 756.0) polyadenylate-binding protein, putative / PABP, putative, similar to poly(A)-binding protein GB:AAF66825 GI:7673359 from (Nicotiana tabacum). Highly and ubiquitously expressed. Member of the class II PABP family.; poly(A) binding protein 8 (PAB8); CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 2 (TAIR:AT4G34110.1). & (gnl|cdd|35345 : 434.0) no description available & (gnl|cdd|64519 : 105.0) no description available & (p28644|roc1_spiol : 84.0) 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) & (reliability: 1512.0) & (original description: Putative PAB3, Description = Polyadenylate-binding protein 3, PFAM = PF00658;PF00076;PF00076;PF00076;PF00076)' T '27.1' 'RNA.processing' 'niben101scf07728_183266-185961' '(at5g13830 : 306.0) FtsJ-like methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, nucleic acid binding, RNA methyltransferase activity; INVOLVED IN: methylation, rRNA processing, rRNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, root, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: 23S ribosomal RNA methyltransferase (InterPro:IPR016448), Ribosomal RNA methyltransferase J (InterPro:IPR015507), Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877); BEST Arabidopsis thaliana protein match is: FtsJ-like methyltransferase family protein (TAIR:AT4G25730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36314 : 209.0) no description available & (gnl|cdd|30641 : 139.0) no description available & (reliability: 612.0) & (original description: Putative ftsJ, Description = FtsJ, PFAM = PF01728)' T '27.1' 'RNA.processing' 'niben101scf07740_11240-17281' '(at3g26560 : 1659.0) ATP-dependent RNA helicase, putative; FUNCTIONS IN: in 6 functions; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Domain of unknown function DUF1605 (InterPro:IPR011709), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G32490.2); Has 53052 Blast hits to 35825 proteins in 3176 species: Archae - 195; Bacteria - 13845; Metazoa - 17201; Fungi - 5520; Plants - 3365; Viruses - 1203; Other Eukaryotes - 11723 (source: NCBI BLink). & (gnl|cdd|36140 : 1016.0) no description available & (gnl|cdd|31829 : 682.0) no description available & (reliability: 3318.0) & (original description: Putative dhx8, Description = ATP-dependent RNA helicase DHX8, PFAM = PF00270;PF04408;PF00271;PF07717;PF00575)' T '27.1' 'RNA.processing' 'niben101scf08142_17739-26831' '(at5g20040 : 569.0) Encodes tRNA isopentenyltransferase AtIPT9.; isopentenyltransferase 9 (IPT9); FUNCTIONS IN: tRNA dimethylallyltransferase activity, ATP binding; INVOLVED IN: tRNA processing, cytokinin biosynthetic process; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA delta(2)-isopentenylpyrophosphate transferase (InterPro:IPR018022), tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 1 (TAIR:AT1G68460.1). & (gnl|cdd|80505 : 280.0) no description available & (gnl|cdd|36598 : 242.0) no description available & (reliability: 1138.0) & (original description: Putative IPT9, Description = tRNA dimethylallyltransferase 9, PFAM = PF01715)' T '27.1' 'RNA.processing' 'niben101scf08355_339737-345796' '(at4g38020 : 379.0) tRNA/rRNA methyltransferase (SpoU) family protein; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537); Has 12174 Blast hits to 12170 proteins in 2688 species: Archae - 7; Bacteria - 9680; Metazoa - 153; Fungi - 96; Plants - 106; Viruses - 0; Other Eukaryotes - 2132 (source: NCBI BLink). & (gnl|cdd|37717 : 249.0) no description available & (gnl|cdd|30912 : 151.0) no description available & (reliability: 758.0) & (original description: Putative At4g38020, Description = At4g38020, PFAM = PF00588)' T '27.1' 'RNA.processing' 'niben101scf08390_409131-413241' '(at3g19330 : 225.0) Protein of unknown function (DUF677); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT3G19250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 450.0) & (original description: Putative At3g19330, Description = UPF0496 protein At3g19330, PFAM = PF05055)' T '27.1' 'RNA.processing' 'niben101scf08515_100534-120630' '(at1g08370 : 311.0) Encodes DCP1 involved in mRNA decapping. DCP1 forms a mRNA decapping complex with DCP2 (At5g13570) and VCS (VARICOSE) (At3g13300). However, unlike DCP2, DCP1 itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP2.; decapping 1 (DCP1); CONTAINS InterPro DOMAIN/s: Dcp1-like decapping (InterPro:IPR010334); Has 3561 Blast hits to 2917 proteins in 377 species: Archae - 4; Bacteria - 239; Metazoa - 1310; Fungi - 561; Plants - 741; Viruses - 142; Other Eukaryotes - 564 (source: NCBI BLink). & (gnl|cdd|38079 : 181.0) no description available & (gnl|cdd|69574 : 173.0) no description available & (reliability: 622.0) & (original description: Putative At1g08370, Description = mRNA-decapping enzyme-like protein, PFAM = PF06058)' T '27.1' 'RNA.processing' 'niben101scf08649_38319-41126' '(at2g34750 : 116.0) RNA polymerase I specific transcription initiation factor RRN3 protein; FUNCTIONS IN: RNA polymerase I transcription factor activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase I specific transcription initiation factor RRN3 (InterPro:IPR007991); BEST Arabidopsis thaliana protein match is: RNA polymerase I specific transcription initiation factor RRN3 protein (TAIR:AT1G30590.1); Has 368 Blast hits to 356 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 131; Plants - 69; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|68882 : 89.7) no description available & (gnl|cdd|37645 : 87.7) no description available & (reliability: 232.0) & (original description: Putative glysoja_014844, Description = RNA polymerase I-specific transcription initiation factor RRN3, PFAM = PF05327)' T '27.1' 'RNA.processing' 'niben101scf08863_221206-225466' '(at5g15390 : 406.0) tRNA/rRNA methyltransferase (SpoU) family protein; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537); Has 11780 Blast hits to 11778 proteins in 2508 species: Archae - 10; Bacteria - 9274; Metazoa - 151; Fungi - 61; Plants - 151; Viruses - 0; Other Eukaryotes - 2133 (source: NCBI BLink). & (gnl|cdd|36056 : 184.0) no description available & (gnl|cdd|84887 : 136.0) no description available & (reliability: 812.0) & (original description: Putative rlmB, Description = 23S rRNA (Guanosine-2'-O-)-methyltransferase, PFAM = PF00588)' T '27.1' 'RNA.processing' 'niben101scf08873_215945-223948' '(at5g63120 : 685.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G55150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35552 : 581.0) no description available & (p46942|db10_nicsy : 421.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|30859 : 401.0) no description available & (reliability: 1370.0) & (original description: Putative RH20, Description = DEAD-box ATP-dependent RNA helicase 20, PFAM = PF00270;PF00271)' T '27.1' 'RNA.processing' 'niben101scf08975_349623-358045' '(at3g20650 : 622.0) mRNA capping enzyme family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: mRNA capping; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: mRNA (guanine-N(7))-methyltransferase (InterPro:IPR016899), mRNA capping enzyme, large subunit (InterPro:IPR004971); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G52210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6z9u7|mces1_orysa : 555.0) mRNA cap guanine-N7 methyltransferase 1 (EC 2.1.1.56) (mRNA (guanine-N(7)-)-methyltransferase 1) (mRNA cap methyltransferase 1) - Oryza sativa (Rice) & (gnl|cdd|37186 : 427.0) no description available & (gnl|cdd|66934 : 346.0) no description available & (reliability: 1244.0) & (original description: Putative pcm1, Description = mRNA cap guanine-N7 methyltransferase, PFAM = PF03291)' T '27.1' 'RNA.processing' 'niben101scf09123_291572-315362' '(at3g09100 : 861.0) mRNA capping enzyme family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422), ATP dependent DNA ligase, central (InterPro:IPR012310), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme, C-terminal (InterPro:IPR013846); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT5G01290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37597 : 349.0) no description available & (gnl|cdd|85390 : 238.0) no description available & (reliability: 1650.0) & (original description: Putative RNGTT, Description = mRNA-capping enzyme, PFAM = PF01331;PF03919;PF00782)' T '27.1' 'RNA.processing' 'niben101scf09234_397559-434042' '(at3g05040 : 1439.0) Encodes member of importin/exportin family. Involved in timing of shoot maturation. Involved in miRNA transport. Mutants flower early and have small, curled leaves and reduced abundance of certain miRNA species.; HASTY (HST); CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); Has 520 Blast hits to 417 proteins in 141 species: Archae - 0; Bacteria - 0; Metazoa - 205; Fungi - 183; Plants - 102; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|37231 : 135.0) no description available & (gnl|cdd|87516 : 99.5) no description available & (reliability: 2878.0) & (original description: Putative HST1, Description = Protein HASTY 1, PFAM = PF08389)' T '27.1' 'RNA.processing' 'niben101scf10065_111013-121725' '(at2g34750 : 509.0) RNA polymerase I specific transcription initiation factor RRN3 protein; FUNCTIONS IN: RNA polymerase I transcription factor activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase I specific transcription initiation factor RRN3 (InterPro:IPR007991); BEST Arabidopsis thaliana protein match is: RNA polymerase I specific transcription initiation factor RRN3 protein (TAIR:AT1G30590.1); Has 368 Blast hits to 356 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 131; Plants - 69; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|68882 : 389.0) no description available & (gnl|cdd|37645 : 290.0) no description available & (reliability: 1018.0) & (original description: Putative At1g30590, Description = RNA polymerase I specific transcription initiation factor RRN3 protein, PFAM = PF05327)' T '27.1' 'RNA.processing' 'niben101scf10189_292719-298565' '(at5g48870 : 154.0) SAD1 encodes a polypeptide similar to multifunctional Sm-like snRNP proteins that are required for mRNA splicing, export, and degradation. Mutation in this gene increases plant sensitivity to drought stress and ABA in seed germination, root growth, and the expression of some stress-responsive genes.; SUPERSENSITIVE TO ABA AND DROUGHT 1 (SAD1); CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36986 : 136.0) no description available & (gnl|cdd|29719 : 128.0) no description available & (reliability: 308.0) & (original description: Putative LSM5, Description = Sm-like protein LSM5, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben101scf10333_64731-71839' '(at1g03530 : 231.0) nuclear assembly factor 1 (NAF1); FUNCTIONS IN: snoRNA binding, pseudouridine synthase activity; INVOLVED IN: biological_process unknown; LOCATED IN: box H/ACA snoRNP complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 (InterPro:IPR007504); Has 55446 Blast hits to 31211 proteins in 1683 species: Archae - 434; Bacteria - 10062; Metazoa - 16821; Fungi - 8873; Plants - 3938; Viruses - 821; Other Eukaryotes - 14497 (source: NCBI BLink). & (gnl|cdd|37447 : 171.0) no description available & (gnl|cdd|69038 : 165.0) no description available & (reliability: 462.0) & (original description: Putative NAF1, Description = H/ACA ribonucleoprotein complex non-core subunit NAF1, PFAM = PF04410)' T '27.1' 'RNA.processing' 'niben101scf11009_27210-31637' '(at3g09650 : 869.0) RNA binding protein involved in the processing of chloroplast psbB-psbT-psbH-petB-petD transcript unit.; HIGH CHLOROPHYLL FLUORESCENCE 152 (HCF152); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G03100.1); Has 43769 Blast hits to 13527 proteins in 285 species: Archae - 3; Bacteria - 26; Metazoa - 343; Fungi - 654; Plants - 41314; Viruses - 0; Other Eukaryotes - 1429 (source: NCBI BLink). & (q76c99|rf1_orysa : 162.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1738.0) & (original description: Putative HCF152, Description = Pentatricopeptide repeat-containing protein At3g09650, chloroplastic, PFAM = PF13041;PF13041;PF13041;PF12854;PF13812;PF01535)' T '27.1' 'RNA.processing' 'niben101scf11084_378003-382541' '(at2g41500 : 577.0) Encodes LACHESIS (LIS), a protein with seven WD40 repeats. LIS is homologous to the yeast splicing factor PRP4 which is associated with the U4/U6 complex of the spliceosome. LIS is involved in a mechanism that prevents accessory cells from adopting gametic cell fate: lis mutant forms supernumerary egg cells.; LACHESIS (LIS); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), Pre-mRNA processing factor 4 (PRP4) like (InterPro:IPR014906), WD40 repeat (InterPro:IPR001680), Splicing factor motif (InterPro:IPR003648), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G05720.1); Has 96331 Blast hits to 36444 proteins in 930 species: Archae - 78; Bacteria - 11869; Metazoa - 38307; Fungi - 21059; Plants - 12275; Viruses - 15; Other Eukaryotes - 12728 (source: NCBI BLink). & (gnl|cdd|35493 : 561.0) no description available & (gnl|cdd|29257 : 268.0) no description available & (p93107|pf20_chlre : 128.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1154.0) & (original description: Putative LIS, Description = U4/U6 small nuclear ribonucleoprotein PRP4-like protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF08799)' T '27.1' 'RNA.processing' 'niben101scf11303_128675-148002' '(at5g23080 : 764.0) Interacts with TATA-box binding protein 2. Contains domains with strong similarity to G-patch and SWAP domains, characteristic of RNA binding and processing proteins. Colocalizes with the splicing regulator SRp34 to subnuclear particles. Role in RNA binding or processing. Mutants display developmental defects, including reduced plant height, polycotyly, and reduced vascularization. Strong genetic interaction between TGH and AMP1.; TOUGH (TGH); FUNCTIONS IN: protein binding, RNA binding; INVOLVED IN: multicellular organismal development, phloem or xylem histogenesis, RNA processing; LOCATED IN: nucleus; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1604 (InterPro:IPR011666), SWAP/Surp (InterPro:IPR000061); Has 34900 Blast hits to 18983 proteins in 949 species: Archae - 12; Bacteria - 1329; Metazoa - 18979; Fungi - 3127; Plants - 2236; Viruses - 165; Other Eukaryotes - 9052 (source: NCBI BLink). & (gnl|cdd|37349 : 437.0) no description available & (gnl|cdd|71154 : 115.0) no description available & (reliability: 1528.0) & (original description: Putative TGH, Description = G patch domain-containing protein TGH, PFAM = PF01805;PF07713)' T '27.1' 'RNA.processing' 'niben101scf11312_168534-173892' '(at3g14080 : 186.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT1G19120.1); Has 1121 Blast hits to 1119 proteins in 232 species: Archae - 63; Bacteria - 0; Metazoa - 413; Fungi - 327; Plants - 207; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|36993 : 158.0) no description available & (gnl|cdd|29715 : 107.0) no description available & (reliability: 372.0) & (original description: Putative LSM1B, Description = Sm-like protein LSM1B, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben101scf11312_170626-173206' '(at3g14080 : 127.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT1G19120.1); Has 1121 Blast hits to 1119 proteins in 232 species: Archae - 63; Bacteria - 0; Metazoa - 413; Fungi - 327; Plants - 207; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|36993 : 125.0) no description available & (gnl|cdd|29715 : 91.0) no description available & (reliability: 254.0) & (original description: Putative lsm1, Description = U6 snRNA-associated Sm-like protein LSm1, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben101scf11779_203592-213906' '(at1g80670 : 598.0) This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase; Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G15850.1); Has 28564 Blast hits to 16034 proteins in 648 species: Archae - 58; Bacteria - 6462; Metazoa - 9394; Fungi - 6178; Plants - 3041; Viruses - 0; Other Eukaryotes - 3431 (source: NCBI BLink). & (gnl|cdd|35866 : 483.0) no description available & (gnl|cdd|29257 : 124.0) no description available & (reliability: 1196.0) & (original description: Putative RAE1, Description = Protein RAE1, PFAM = PF00400;PF00400;PF00400;PF00400)' T '27.1' 'RNA.processing' 'niben101scf11884_67457-75014' '(at5g11010 : 470.0) Pre-mRNA cleavage complex II protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pre-mRNA cleavage complex II Clp1 (InterPro:IPR010655); BEST Arabidopsis thaliana protein match is: CLP-similar protein 3 (TAIR:AT3G04680.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37961 : 192.0) no description available & (gnl|cdd|87453 : 145.0) no description available & (reliability: 940.0) & (original description: Putative At5g11010, Description = Polynucleotide 5'-hydroxyl-kinase NOL9, PFAM = PF16575)' T '27.1' 'RNA.processing' 'niben101scf13260_22463-24813' '(at4g18372 : 141.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29704 : 87.2) no description available & (reliability: 282.0) & (original description: Putative snrnp, Description = Small nuclear ribonucleoprotein family protein, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben101scf13644_54612-57049' '(gnl|cdd|37785 : 122.0) no description available & (at1g60170 : 118.0) embryo defective 1220 (emb1220); CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOSIC (InterPro:IPR012976), Prp31 C-terminal (InterPro:IPR019175); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70400.1); Has 1596 Blast hits to 1590 proteins in 356 species: Archae - 207; Bacteria - 2; Metazoa - 385; Fungi - 430; Plants - 224; Viruses - 0; Other Eukaryotes - 348 (source: NCBI BLink). & (gnl|cdd|85685 : 100.0) no description available & (reliability: 236.0) & (original description: Putative emb1220, Description = U4/U6 small nuclear ribonucleoprotein Prp31, PFAM = PF01798)' T '27.1' 'RNA.processing' 'niben101scf13762_169389-175939' '(at4g27000 : 390.0) ATRBP45C; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35370 : 135.0) no description available & (gnl|cdd|31068 : 92.0) no description available & (p19683|roc4_nicsy : 82.8) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 742.0) & (original description: Putative RBP45, Description = Polyadenylate-binding protein RBP45, PFAM = PF00076;PF00076;PF00076)' T '27.1' 'RNA.processing' 'niben101scf14297_166049-171132' '(at4g34730 : 228.0) ribosome-binding factor A family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: rRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosome-binding factor A, conserved site (InterPro:IPR020053), K homology-like, alpha/beta (InterPro:IPR015946), Ribosome-binding factor A (InterPro:IPR000238); Has 4827 Blast hits to 4826 proteins in 1979 species: Archae - 0; Bacteria - 4129; Metazoa - 5; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 652 (source: NCBI BLink). & (gnl|cdd|80696 : 111.0) no description available & (reliability: 456.0) & (original description: Putative rbfA, Description = Ribosome-binding factor A, PFAM = PF02033)' T '27.1' 'RNA.processing' 'niben101scf15538_46652-62763' '(at4g17610 : 205.0) tRNA/rRNA methyltransferase (SpoU) family protein; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537); Has 6630 Blast hits to 6614 proteins in 1865 species: Archae - 7; Bacteria - 4787; Metazoa - 103; Fungi - 50; Plants - 109; Viruses - 0; Other Eukaryotes - 1574 (source: NCBI BLink). & (gnl|cdd|36057 : 80.1) no description available & (reliability: 410.0) & (original description: Putative dl4840c, Description = Putative methyltransferase TARBP1, PFAM = )' T '27.1' 'RNA.processing' 'niben101scf15538_67240-71037' '(at4g17610 : 117.0) tRNA/rRNA methyltransferase (SpoU) family protein; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537); Has 6630 Blast hits to 6614 proteins in 1865 species: Archae - 7; Bacteria - 4787; Metazoa - 103; Fungi - 50; Plants - 109; Viruses - 0; Other Eukaryotes - 1574 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative dl4840c, Description = Putative methyltransferase TARBP1, PFAM = )' T '27.1' 'RNA.processing' 'niben101scf15962_111937-119915' '(at1g01860 : 284.0) dimethyladenosine transferase; PALEFACE 1 (PFC1); FUNCTIONS IN: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity; INVOLVED IN: response to cold; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA adenine methylase transferase, N-terminal (InterPro:IPR020598), Ribosomal RNA adenine methylase transferase, conserved site (InterPro:IPR020596), Ribosomal RNA adenine methylase transferase (InterPro:IPR001737); BEST Arabidopsis thaliana protein match is: Ribosomal RNA adenine dimethylase family protein (TAIR:AT5G66360.2); Has 9632 Blast hits to 9628 proteins in 3006 species: Archae - 228; Bacteria - 6144; Metazoa - 264; Fungi - 142; Plants - 116; Viruses - 0; Other Eukaryotes - 2738 (source: NCBI BLink). & (gnl|cdd|80598 : 152.0) no description available & (gnl|cdd|36038 : 148.0) no description available & (reliability: 568.0) & (original description: Putative PFC1, Description = rRNA adenine N(6)-methyltransferase, PFAM = PF00398)' T '27.1' 'RNA.processing' 'niben101scf17164_114964-133927' '(at5g14580 : 1184.0) polyribonucleotide nucleotidyltransferase, putative; FUNCTIONS IN: polyribonucleotide nucleotidyltransferase activity, 3'-5'-exoribonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: mRNA catabolic process, RNA processing; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type (InterPro:IPR015848), K Homology (InterPro:IPR004087), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Polyribonucleotide nucleotidyltransferase (InterPro:IPR012162); BEST Arabidopsis thaliana protein match is: polyribonucleotide nucleotidyltransferase, putative (TAIR:AT3G03710.1); Has 30004 Blast hits to 26962 proteins in 2901 species: Archae - 317; Bacteria - 19794; Metazoa - 489; Fungi - 141; Plants - 452; Viruses - 0; Other Eukaryotes - 8811 (source: NCBI BLink). & (gnl|cdd|36285 : 910.0) no description available & (gnl|cdd|83994 : 813.0) no description available & (reliability: 2368.0) & (original description: Putative PNP2, Description = Polyribonucleotide nucleotidyltransferase 2, mitochondrial, PFAM = PF03726;PF01138;PF01138;PF00575;PF03725)' T '27.1' 'RNA.processing' 'niben101scf18129_116729-121613' '(at2g40650 : 322.0) PRP38 family protein; CONTAINS InterPro DOMAIN/s: PRP38 (InterPro:IPR005037); BEST Arabidopsis thaliana protein match is: SART-1 family (TAIR:AT5G16780.1); Has 71927 Blast hits to 24591 proteins in 1125 species: Archae - 74; Bacteria - 21911; Metazoa - 26638; Fungi - 6334; Plants - 3978; Viruses - 317; Other Eukaryotes - 12675 (source: NCBI BLink). & (gnl|cdd|38100 : 264.0) no description available & (gnl|cdd|86306 : 176.0) no description available & (reliability: 644.0) & (original description: Putative v1g41962, Description = Predicted protein, PFAM = PF12871;PF03371)' T '27.1' 'RNA.processing' 'niben101scf19059_1672-8023' '(at4g02400 : 110.0) U3 ribonucleoprotein (Utp) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: small-subunit processome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp14 (InterPro:IPR006709); BEST Arabidopsis thaliana protein match is: U3 ribonucleoprotein (Utp) family protein (TAIR:AT5G08600.2); Has 7468 Blast hits to 4514 proteins in 366 species: Archae - 14; Bacteria - 554; Metazoa - 2650; Fungi - 816; Plants - 392; Viruses - 146; Other Eukaryotes - 2896 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative , Description = U3 small nucleolar RNA-associated protein, putative, PFAM = PF04615)' T '27.1' 'RNA.processing' 'niben101scf19059_3453-6385' '(gnl|cdd|68196 : 104.0) no description available & (at4g02400 : 103.0) U3 ribonucleoprotein (Utp) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: small-subunit processome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp14 (InterPro:IPR006709); BEST Arabidopsis thaliana protein match is: U3 ribonucleoprotein (Utp) family protein (TAIR:AT5G08600.2); Has 7468 Blast hits to 4514 proteins in 366 species: Archae - 14; Bacteria - 554; Metazoa - 2650; Fungi - 816; Plants - 392; Viruses - 146; Other Eukaryotes - 2896 (source: NCBI BLink). & (gnl|cdd|37383 : 87.8) no description available & (reliability: 202.0) & (original description: Putative Os03g0343300, Description = Os03g0343300 protein, PFAM = PF04615)' T '27.1' 'RNA.processing' 'niben101scf20914_111932-119875' '(at1g03330 : 173.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), U6 snRNA-associated Sm-like protein LSm2 (InterPro:IPR016654), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); Has 762 Blast hits to 762 proteins in 209 species: Archae - 2; Bacteria - 0; Metazoa - 303; Fungi - 225; Plants - 97; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|38658 : 151.0) no description available & (gnl|cdd|29712 : 132.0) no description available & (reliability: 346.0) & (original description: Putative LSM2, Description = Sm-like protein LSM2, PFAM = PF01423)' T '27.1' 'RNA.processing' 'niben101scf21107_14453-33315' '(at3g13300 : 1266.0) Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development.; VARICOSE (VCS); FUNCTIONS IN: protein homodimerization activity, nucleotide binding; INVOLVED IN: mRNA catabolic process, deadenylation-independent decapping of nuclear-transcribed mRNA, leaf morphogenesis; LOCATED IN: cytosol, nucleus, cytoplasmic mRNA processing body; EXPRESSED IN: whole plant, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: varicose-related (TAIR:AT3G13290.1); Has 885 Blast hits to 799 proteins in 264 species: Archae - 2; Bacteria - 218; Metazoa - 230; Fungi - 185; Plants - 114; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|37127 : 818.0) no description available & (reliability: 2532.0) & (original description: Putative VCS, Description = Enhancer of mRNA-decapping protein 4, PFAM = PF16529)' T '27.1' 'RNA.processing' 'niben101scf26315_9196-29343' '(at5g13570 : 439.0) Encodes DCP2 with mRNA decapping activity. DCP2 forms a mRNA decapping complex with DCP1 (At1g08370) and VCS (VARICOSE) (At3g13300). Recombinant DCP2 is enzymatically active in vitro, generating from capped mRNAs m7GDP, and 5í-phosphorylated mRNAs. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP1.; decapping 2 (DCP2); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Dcp2, box A (InterPro:IPR007722), NUDIX hydrolase domain (InterPro:IPR000086). & (gnl|cdd|38148 : 268.0) no description available & (gnl|cdd|72892 : 206.0) no description available & (reliability: 878.0) & (original description: Putative DCP2, Description = mRNA-decapping enzyme subunit 2, PFAM = PF00293;PF05026)' T '27.1' 'RNA.processing' 'niben101scf38001_2407-5249' '(at1g11650 : 219.0) RBP45B; FUNCTIONS IN: RNA binding; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 29660 Blast hits to 18296 proteins in 811 species: Archae - 14; Bacteria - 2273; Metazoa - 15265; Fungi - 3531; Plants - 5870; Viruses - 0; Other Eukaryotes - 2707 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative dbdA, Description = Nuclear acid binding protein, putative, PFAM = PF00076;PF00076)' T '27.1' 'RNA.processing' 'niben101scf39490_13956-21191' '(at1g51310 : 718.0) transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases; FUNCTIONS IN: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity, transferase activity; INVOLVED IN: tRNA processing, RNA processing; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), tRNA-specific 2-thiouridylase (InterPro:IPR004506); Has 8544 Blast hits to 8538 proteins in 2600 species: Archae - 0; Bacteria - 5626; Metazoa - 134; Fungi - 60; Plants - 58; Viruses - 0; Other Eukaryotes - 2666 (source: NCBI BLink). & (gnl|cdd|38016 : 465.0) no description available & (gnl|cdd|66710 : 438.0) no description available & (reliability: 1436.0) & (original description: Putative mnmA, Description = tRNA-specific 2-thiouridylase MnmA, PFAM = PF03054)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold1505_83211-93375' '(gnl|cdd|37464 : 231.0) no description available & (at1g60200 : 204.0) splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Splicing factor PWI (InterPro:IPR002483); Has 135188 Blast hits to 78111 proteins in 2910 species: Archae - 381; Bacteria - 16050; Metazoa - 59921; Fungi - 15870; Plants - 11369; Viruses - 1556; Other Eukaryotes - 30041 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative At1g60200, Description = Putative uncharacterized protein At1g60210, PFAM = PF01480;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold6269_102878-110504' '(at1g02840 : 246.0) SR1 is a plant homologue of the human general/alternative splicing factor SF2/ASF.; SR1; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: interchromatin granule, nuclear speck, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G02430.2); Has 35131 Blast hits to 21345 proteins in 1053 species: Archae - 12; Bacteria - 1352; Metazoa - 20795; Fungi - 3692; Plants - 3807; Viruses - 567; Other Eukaryotes - 4906 (source: NCBI BLink). & (gnl|cdd|35328 : 201.0) no description available & (gnl|cdd|47687 : 80.7) no description available & (reliability: 492.0) & (original description: Putative srp31, Description = Pre-mRNA-splicing factor SF2, PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold6918_33528-46529' '(at4g21660 : 642.0) proline-rich spliceosome-associated (PSP) family protein; INVOLVED IN: mRNA processing; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: PSP, proline-rich (InterPro:IPR006568), Protein of unknown function DUF382 (InterPro:IPR007180); BEST Arabidopsis thaliana protein match is: pliceosome associated protein-related (TAIR:AT1G11520.1). & (gnl|cdd|37541 : 415.0) no description available & (gnl|cdd|34781 : 242.0) no description available & (reliability: 1284.0) & (original description: Putative SF3B2, Description = Splicing factor 3B subunit 2, PFAM = PF04037;PF04046)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold7591_25719-30382' '(at5g51300 : 682.0) splicing factor-related; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), RNA recognition motif, RNP-1 (InterPro:IPR000504), K Homology, type 1 (InterPro:IPR004088), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G09660.1); Has 82686 Blast hits to 53020 proteins in 1818 species: Archae - 38; Bacteria - 8214; Metazoa - 37936; Fungi - 14163; Plants - 12444; Viruses - 1255; Other Eukaryotes - 8636 (source: NCBI BLink). & (gnl|cdd|35341 : 271.0) no description available & (gnl|cdd|29005 : 165.0) no description available & (reliability: 1364.0) & (original description: Putative bbp, Description = Branchpoint-bridging protein, PFAM = PF00076;PF00013;PF16275)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold11392_1043-10403' '(at1g60900 : 619.0) U2 snRNP auxilliary factor, large subunit, splicing factor; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 snRNP auxilliary factor, large subunit, splicing factor (InterPro:IPR006529); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT4G36690.4); Has 95343 Blast hits to 42389 proteins in 1915 species: Archae - 82; Bacteria - 12197; Metazoa - 47091; Fungi - 9469; Plants - 8106; Viruses - 663; Other Eukaryotes - 17735 (source: NCBI BLink). & (gnl|cdd|35342 : 426.0) no description available & (reliability: 1238.0) & (original description: Putative U2AF2, Description = Splicing factor U2AF 65 kDa subunit, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold18882_26455-33910' '(at2g30260 : 285.0) encodes U2B", which is a component of the U2 snRNP complex. Its precise role in pre-mRNA splicing is still unknown. It has been suggested that U2B0 may not be required for the splicing reaction itself but may have a role in U2 snRNP biogenesis. Deletion analysis of the U2B0 gene fusion has identified the N-terminal RNP-80 motif as sufficient for localization to the coiled body and the nucleus.; U2 small nuclear ribonucleoprotein B (U2B''); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: cis assembly of pre-catalytic spliceosome; LOCATED IN: nucleoplasm, Cajal body, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G06960.1); Has 1885 Blast hits to 1858 proteins in 260 species: Archae - 0; Bacteria - 2; Metazoa - 926; Fungi - 414; Plants - 327; Viruses - 1; Other Eukaryotes - 215 (source: NCBI BLink). & (gnl|cdd|39407 : 257.0) no description available & (reliability: 570.0) & (original description: Putative U2B'', Description = U2 small nuclear ribonucleoprotein B'', PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold18882_27539-31332' '(at2g30260 : 149.0) encodes U2B", which is a component of the U2 snRNP complex. Its precise role in pre-mRNA splicing is still unknown. It has been suggested that U2B0 may not be required for the splicing reaction itself but may have a role in U2 snRNP biogenesis. Deletion analysis of the U2B0 gene fusion has identified the N-terminal RNP-80 motif as sufficient for localization to the coiled body and the nucleus.; U2 small nuclear ribonucleoprotein B (U2B''); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: cis assembly of pre-catalytic spliceosome; LOCATED IN: nucleoplasm, Cajal body, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G06960.1); Has 1885 Blast hits to 1858 proteins in 260 species: Archae - 0; Bacteria - 2; Metazoa - 926; Fungi - 414; Plants - 327; Viruses - 1; Other Eukaryotes - 215 (source: NCBI BLink). & (gnl|cdd|39407 : 130.0) no description available & (reliability: 298.0) & (original description: Putative liz, Description = U2 small nuclear ribonucleoprotein B, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold27151_15032-20163' '(at2g37340 : 181.0) encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks.; arginine/serine-rich zinc knuckle-containing protein 33 (RSZ33); FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT3G53500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative RS2Z32, Description = Serine/arginine-rich splicing factor RS2Z32, PFAM = PF00076;PF00098;PF00098)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold31408_6531-15719' '(at3g55200 : 2266.0) Cleavage and polyadenylation specificity factor (CPSF) A subunit protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: WD40 repeat (InterPro:IPR001680), Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: Cleavage and polyadenylation specificity factor (CPSF) A subunit protein (TAIR:AT3G55220.1); Has 1074 Blast hits to 953 proteins in 223 species: Archae - 0; Bacteria - 2; Metazoa - 406; Fungi - 248; Plants - 228; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (gnl|cdd|37109 : 1596.0) no description available & (gnl|cdd|66828 : 230.0) no description available & (reliability: 4532.0) & (original description: Putative Sf3b3, Description = Splicing factor 3B subunit 3, PFAM = PF03178;PF10433)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold37635_7222-18858' '(at3g19840 : 191.0) Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries.; pre-mRNA-processing protein 40C (PRP40C); CONTAINS InterPro DOMAIN/s: FF domain (InterPro:IPR002713), WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: pre-mRNA-processing protein 40A (TAIR:AT1G44910.2); Has 7513 Blast hits to 5748 proteins in 436 species: Archae - 33; Bacteria - 336; Metazoa - 3654; Fungi - 967; Plants - 481; Viruses - 7; Other Eukaryotes - 2035 (source: NCBI BLink). & (gnl|cdd|35377 : 108.0) no description available & (reliability: 382.0) & (original description: Putative MED35C, Description = Transcription elongation regulator 1, PFAM = PF00397)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold40897_7545-18890' '(at1g04510 : 790.0) Encodes MAC3A, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19. Associated with the MOS4-Associated Complex (MAC). Involved in plant innate immunity.; MOS4-associated complex 3A (MAC3A); FUNCTIONS IN: ubiquitin-protein ligase activity, nucleotide binding; INVOLVED IN: response to cadmium ion, defense response to bacterium; LOCATED IN: nucleolus, nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), U box domain (InterPro:IPR003613), WD40 repeat (InterPro:IPR001680), Pre-mRNA-splicing factor 19 (InterPro:IPR013915), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated complex 3B (TAIR:AT2G33340.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35510 : 588.0) no description available & (gnl|cdd|29257 : 172.0) no description available & (p93107|pf20_chlre : 89.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1556.0) & (original description: Putative PRP19A, Description = Pre-mRNA-processing factor 19 homolog 1, PFAM = PF00400;PF00400;PF00400;PF08606;PF04564)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold41697_10819-16766' '(at5g37370 : 399.0) encodes a putative splicing factor. Over-expression in yeast and Arabidopsis result in increased tolerance to high salt.; ATSRL1; FUNCTIONS IN: binding; INVOLVED IN: response to salt stress, RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PRP38 (InterPro:IPR005037). & (gnl|cdd|38099 : 292.0) no description available & (gnl|cdd|86306 : 127.0) no description available & (reliability: 798.0) & (original description: Putative ATSRL1, Description = At5g37370, PFAM = PF03371)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold48359_9272-14450' '(at5g42820 : 274.0) U2 auxiliary factor small subunit. The atU2AF35b protein and its homolog, atU2AF35a, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions.; U2AF35B; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: photoperiodism, flowering; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 auxiliary factor small subunit (InterPro:IPR009145); BEST Arabidopsis thaliana protein match is: U2 snRNP auxiliary factor small subunit, putative (TAIR:AT1G27650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37413 : 253.0) no description available & (reliability: 548.0) & (original description: Putative u2AF, Description = Splicing factor U2AF 35 kDa subunit, PFAM = PF00076;PF00642)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold56282_3590-13037' '(at1g10320 : 343.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition, domain 1 (InterPro:IPR003954), U2 auxiliary factor small subunit (InterPro:IPR009145); BEST Arabidopsis thaliana protein match is: U2 snRNP auxiliary factor small subunit, putative (TAIR:AT1G27650.1); Has 103377 Blast hits to 43645 proteins in 2110 species: Archae - 258; Bacteria - 11294; Metazoa - 44927; Fungi - 9113; Plants - 5313; Viruses - 581; Other Eukaryotes - 31891 (source: NCBI BLink). & (gnl|cdd|37413 : 164.0) no description available & (reliability: 686.0) & (original description: Putative U2AFM, Description = U2AFM, PFAM = PF00642;PF00642;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold58139_163-12462' '(at5g64200 : 171.0) encodes an SC35-like splicing factor of 35 kD localized to the nuclear specks.; ortholog of human splicing factor SC35 (SC35); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: cytosol, nuclear speck, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 30A (TAIR:AT3G13570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39408 : 91.8) no description available & (reliability: 342.0) & (original description: Putative SC26, Description = Arginine/serine-rich splicing factor SC26 transcript III, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold59177_1-4036' '(at1g80070 : 703.0) a genetic locus involved in embryogenesis. Mutations in this locus result in an abnormal suspensor and embryo lethality.; ABNORMAL SUSPENSOR 2 (SUS2); INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555), Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding (InterPro:IPR019581), Pre-mRNA-processing-splicing factor 8 (InterPro:IPR012591), PROCN (InterPro:IPR012592), Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding (InterPro:IPR019580), PRP8 domain IV core (InterPro:IPR021983), PRO, C-terminal (InterPro:IPR012984), RNA recognition motif, spliceosomal PrP8 (InterPro:IPR019582); BEST Arabidopsis thaliana protein match is: Pre-mRNA-processing-splicing factor (TAIR:AT4G38780.1); Has 828 Blast hits to 729 proteins in 312 species: Archae - 0; Bacteria - 2; Metazoa - 333; Fungi - 220; Plants - 69; Viruses - 2; Other Eukaryotes - 202 (source: NCBI BLink). & (gnl|cdd|37006 : 672.0) no description available & (gnl|cdd|34777 : 454.0) no description available & (reliability: 1406.0) & (original description: Putative prp8, Description = Pre-mRNA-processing-splicing factor 8, PFAM = PF08083;PF08082)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold65617_216-10383' '(at3g19840 : 309.0) Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries.; pre-mRNA-processing protein 40C (PRP40C); CONTAINS InterPro DOMAIN/s: FF domain (InterPro:IPR002713), WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: pre-mRNA-processing protein 40A (TAIR:AT1G44910.2); Has 7513 Blast hits to 5748 proteins in 436 species: Archae - 33; Bacteria - 336; Metazoa - 3654; Fungi - 967; Plants - 481; Viruses - 7; Other Eukaryotes - 2035 (source: NCBI BLink). & (gnl|cdd|35377 : 184.0) no description available & (reliability: 618.0) & (original description: Putative MED35C, Description = Transcription elongation regulator 1, PFAM = PF01846;PF01846;PF01846)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold66173_3819-9864' '(at2g18510 : 418.0) embryo defective 2444 (emb2444); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 (TAIR:AT1G49760.2); Has 66829 Blast hits to 41224 proteins in 1633 species: Archae - 50; Bacteria - 5635; Metazoa - 30219; Fungi - 10282; Plants - 12025; Viruses - 917; Other Eukaryotes - 7701 (source: NCBI BLink). & (gnl|cdd|35353 : 341.0) no description available & (p19682|roc3_nicsy : 94.0) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47687 : 91.8) no description available & (reliability: 836.0) & (original description: Putative sf3b4, Description = Splicing factor 3B subunit 4, PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold68068_2122-7290' '(at5g37370 : 277.0) encodes a putative splicing factor. Over-expression in yeast and Arabidopsis result in increased tolerance to high salt.; ATSRL1; FUNCTIONS IN: binding; INVOLVED IN: response to salt stress, RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PRP38 (InterPro:IPR005037). & (gnl|cdd|38099 : 219.0) no description available & (gnl|cdd|86306 : 107.0) no description available & (reliability: 554.0) & (original description: Putative Os05g0178900, Description = Os05g0178900 protein, PFAM = PF03371)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold75864_264-4234' '(at2g24590 : 146.0) RNA recognition motif and CCHC-type zinc finger domains containing protein; FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; LOCATED IN: nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: serine/arginine-rich 22 (TAIR:AT4G31580.2); Has 11952 Blast hits to 10510 proteins in 739 species: Archae - 6; Bacteria - 805; Metazoa - 6109; Fungi - 1395; Plants - 2528; Viruses - 91; Other Eukaryotes - 1018 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative RSZ22, Description = Serine/arginine-rich splicing factor RSZ22, PFAM = PF00076;PF00098)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.3scaffold85332_2410-6200' '(at3g27550 : 369.0) RNA-binding CRS1 / YhbY (CRM) domain protein; FUNCTIONS IN: RNA binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain protein (TAIR:AT2G28480.1); Has 9740 Blast hits to 5375 proteins in 499 species: Archae - 16; Bacteria - 3620; Metazoa - 2600; Fungi - 970; Plants - 681; Viruses - 92; Other Eukaryotes - 1761 (source: NCBI BLink). & (gnl|cdd|37201 : 154.0) no description available & (gnl|cdd|85815 : 91.7) no description available & (reliability: 738.0) & (original description: Putative cfm6, Description = Putative CRM domain-containing protein, PFAM = PF01985)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold16_500816-505884' '(at4g03430 : 1345.0) Encodes a nuclear protein similar to the human U5 small ribonucleoprotein-associated 102-kD protein and to the yeast pre-mRNA splicing factors Prp1p and Prp6p. STA1 expression is upregulated by cold stress, and the sta1-1 mutant is defective in the splicing of the cold-induced COR15A gene. Luciferase imaging was used to isolate a recessive mutant, sta1-1, with enhanced stability of the normally unstable luciferase transcript. This mutation also causes the stabilization of some endogenous gene transcripts and has a range of developmental and stress response phenotypes.; EMBRYO DEFECTIVE 2770 (EMB2770); FUNCTIONS IN: binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, response to cold, response to abiotic stimulus; LOCATED IN: nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), PRP1 splicing factor, N-terminal (InterPro:IPR010491), Ubiquitin supergroup (InterPro:IPR019955), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: beta-galactosidase 14 (TAIR:AT4G38590.1); Has 3874 Blast hits to 2098 proteins in 386 species: Archae - 98; Bacteria - 366; Metazoa - 1194; Fungi - 916; Plants - 656; Viruses - 0; Other Eukaryotes - 644 (source: NCBI BLink). & (gnl|cdd|35716 : 1240.0) no description available & (gnl|cdd|69918 : 205.0) no description available & (reliability: 2690.0) & (original description: Putative STA1, Description = Protein STABILIZED1, PFAM = PF13181;PF06424;PF14559)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold284_816407-827516' '(at1g17370 : 571.0) oligouridylate binding protein 1B (UBP1B); FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G14100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35370 : 193.0) no description available & (gnl|cdd|31068 : 88.6) no description available & (reliability: 1142.0) & (original description: Putative UBP1B, Description = Oligouridylate-binding protein 1B, PFAM = PF00076;PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold304_141456-152875' '(at1g80070 : 1901.0) a genetic locus involved in embryogenesis. Mutations in this locus result in an abnormal suspensor and embryo lethality.; ABNORMAL SUSPENSOR 2 (SUS2); INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555), Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding (InterPro:IPR019581), Pre-mRNA-processing-splicing factor 8 (InterPro:IPR012591), PROCN (InterPro:IPR012592), Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding (InterPro:IPR019580), PRP8 domain IV core (InterPro:IPR021983), PRO, C-terminal (InterPro:IPR012984), RNA recognition motif, spliceosomal PrP8 (InterPro:IPR019582); BEST Arabidopsis thaliana protein match is: Pre-mRNA-processing-splicing factor (TAIR:AT4G38780.1); Has 828 Blast hits to 729 proteins in 312 species: Archae - 0; Bacteria - 2; Metazoa - 333; Fungi - 220; Plants - 69; Viruses - 2; Other Eukaryotes - 202 (source: NCBI BLink). & (gnl|cdd|37006 : 1854.0) no description available & (gnl|cdd|34777 : 1449.0) no description available & (reliability: 3802.0) & (original description: Putative Prpf8, Description = Pre-mRNA-processing-splicing factor 8, PFAM = PF08084;PF08082;PF08083;PF10598;PF12134;PF10596;PF01398)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold505_61051-70738' '(at1g10320 : 345.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition, domain 1 (InterPro:IPR003954), U2 auxiliary factor small subunit (InterPro:IPR009145); BEST Arabidopsis thaliana protein match is: U2 snRNP auxiliary factor small subunit, putative (TAIR:AT1G27650.1); Has 103377 Blast hits to 43645 proteins in 2110 species: Archae - 258; Bacteria - 11294; Metazoa - 44927; Fungi - 9113; Plants - 5313; Viruses - 581; Other Eukaryotes - 31891 (source: NCBI BLink). & (gnl|cdd|37413 : 164.0) no description available & (reliability: 690.0) & (original description: Putative u2AF, Description = U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2, PFAM = PF00642;PF00642;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold542_393034-408342' '(at3g13570 : 143.0) encodes an SC35-like splicing factor of 30 kD that is localized to the nuclear specks.; SC35-like splicing factor 30A (SCL30A); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 33 (TAIR:AT1G55310.3); Has 39411 Blast hits to 22154 proteins in 1003 species: Archae - 84; Bacteria - 1991; Metazoa - 19033; Fungi - 3968; Plants - 4828; Viruses - 731; Other Eukaryotes - 8776 (source: NCBI BLink). & (gnl|cdd|84495 : 81.4) no description available & (reliability: 286.0) & (original description: Putative SCL25A, Description = Arginine/serine-rich splicing factor SCL25A transcript I, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold634_498073-508371' '(at1g60900 : 627.0) U2 snRNP auxilliary factor, large subunit, splicing factor; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 snRNP auxilliary factor, large subunit, splicing factor (InterPro:IPR006529); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT4G36690.4); Has 95343 Blast hits to 42389 proteins in 1915 species: Archae - 82; Bacteria - 12197; Metazoa - 47091; Fungi - 9469; Plants - 8106; Viruses - 663; Other Eukaryotes - 17735 (source: NCBI BLink). & (gnl|cdd|35342 : 437.0) no description available & (reliability: 1254.0) & (original description: Putative U2af50, Description = Splicing factor U2AF 50 kDa subunit, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold842_386649-397783' '(at1g09140 : 221.0) Encodes a serine-arginine rich RNA binding protein involved in regulation of splicing (including splicing of itself). Exists as 3 alternative spliced forms that are differentially expressed.; SERINE-ARGININE PROTEIN 30 (ATSRP30); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G02840.3); Has 23 Blast hits to 23 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|35328 : 201.0) no description available & (gnl|cdd|47687 : 81.0) no description available & (reliability: 442.0) & (original description: Putative srp32, Description = ASF/SF2-like pre-mRNA splicing factor SRP32'', PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold1122_240094-245818' '(at3g49430 : 236.0) SER/ARG-rich protein 34A (SRp34a); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G02840.2). & (gnl|cdd|35328 : 187.0) no description available & (reliability: 472.0) & (original description: Putative srp31, Description = Pre-mRNA-splicing factor SF2, PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold1445_136438-151844' '(at2g33340 : 776.0) Encodes MAC3B, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19. Associated with the MOS4-Associated Complex (MAC). Involved in plant innate immunity.; MOS4-associated complex 3B (MAC3B); FUNCTIONS IN: ubiquitin-protein ligase activity, nucleotide binding; INVOLVED IN: defense response to bacterium; LOCATED IN: cell wall, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), U box domain (InterPro:IPR003613), WD40 repeat (InterPro:IPR001680), Pre-mRNA-splicing factor 19 (InterPro:IPR013915), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated complex 3A (TAIR:AT1G04510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35510 : 563.0) no description available & (gnl|cdd|29257 : 167.0) no description available & (p93107|pf20_chlre : 91.7) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1552.0) & (original description: Putative PRP19A, Description = Pre-mRNA-processing factor 19 homolog 1, PFAM = PF00400;PF00400;PF00400;PF00400;PF08606)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold1674_184999-216053' '(at3g19840 : 568.0) Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries.; pre-mRNA-processing protein 40C (PRP40C); CONTAINS InterPro DOMAIN/s: FF domain (InterPro:IPR002713), WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: pre-mRNA-processing protein 40A (TAIR:AT1G44910.2); Has 7513 Blast hits to 5748 proteins in 436 species: Archae - 33; Bacteria - 336; Metazoa - 3654; Fungi - 967; Plants - 481; Viruses - 7; Other Eukaryotes - 2035 (source: NCBI BLink). & (gnl|cdd|35377 : 403.0) no description available & (gnl|cdd|34707 : 94.1) no description available & (reliability: 1136.0) & (original description: Putative MED35C, Description = Pre-mRNA-processing protein 40C, PFAM = PF01846;PF01846;PF01846;PF01846;PF01846;PF00397)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold1885_296738-306698' '(at1g09140 : 209.0) Encodes a serine-arginine rich RNA binding protein involved in regulation of splicing (including splicing of itself). Exists as 3 alternative spliced forms that are differentially expressed.; SERINE-ARGININE PROTEIN 30 (ATSRP30); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G02840.3); Has 23 Blast hits to 23 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|35328 : 208.0) no description available & (gnl|cdd|84495 : 82.6) no description available & (reliability: 418.0) & (original description: Putative SR34A, Description = Serine/arginine-rich splicing factor SR34A, PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold1931_26455-45415' '(at2g30260 : 149.0) encodes U2B", which is a component of the U2 snRNP complex. Its precise role in pre-mRNA splicing is still unknown. It has been suggested that U2B0 may not be required for the splicing reaction itself but may have a role in U2 snRNP biogenesis. Deletion analysis of the U2B0 gene fusion has identified the N-terminal RNP-80 motif as sufficient for localization to the coiled body and the nucleus.; U2 small nuclear ribonucleoprotein B (U2B''); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: cis assembly of pre-catalytic spliceosome; LOCATED IN: nucleoplasm, Cajal body, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G06960.1); Has 1885 Blast hits to 1858 proteins in 260 species: Archae - 0; Bacteria - 2; Metazoa - 926; Fungi - 414; Plants - 327; Viruses - 1; Other Eukaryotes - 215 (source: NCBI BLink). & (gnl|cdd|39407 : 122.0) no description available & (reliability: 298.0) & (original description: Putative Snrpb2, Description = U2-snRNP-specific b'' protein, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold1978_179766-192523' '(at4g36690 : 626.0) ATU2AF65A; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 snRNP auxilliary factor, large subunit, splicing factor (InterPro:IPR006529); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT1G60900.1). & (gnl|cdd|35342 : 440.0) no description available & (reliability: 1252.0) & (original description: Putative spl8, Description = Splicing factor U2af large subunit B, PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold4040_221094-225646' '(at1g23860 : 96.7) Encodes a 9G8-like serine-arginine rich (SR) protein that interacts in vivo with U1-70K, a U1 small nuclear ribonucleoprotein 70-kDa protein that is involved in nuclear precursor mRNA processing.; RS-containing zinc finger protein 21 (RSZP21); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: serine/arginine-rich 22 (TAIR:AT4G31580.2). & (reliability: 193.4) & (original description: Putative 9G8, Description = Serine/arginine-rich splicing factor 7, PFAM = PF00076;PF00098)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold4270_139606-152607' '(at4g21660 : 641.0) proline-rich spliceosome-associated (PSP) family protein; INVOLVED IN: mRNA processing; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: PSP, proline-rich (InterPro:IPR006568), Protein of unknown function DUF382 (InterPro:IPR007180); BEST Arabidopsis thaliana protein match is: pliceosome associated protein-related (TAIR:AT1G11520.1). & (gnl|cdd|37541 : 423.0) no description available & (gnl|cdd|34781 : 245.0) no description available & (reliability: 1282.0) & (original description: Putative sap145, Description = Pre-mRNA-splicing factor sap145, PFAM = PF04037;PF04046)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold5499_30141-41161' '(at1g17370 : 538.0) oligouridylate binding protein 1B (UBP1B); FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G14100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35370 : 197.0) no description available & (gnl|cdd|31068 : 82.8) no description available & (reliability: 1076.0) & (original description: Putative UBP1, Description = Oligouridylate-binding protein 1, PFAM = PF00076;PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'nbv0.5scaffold6735_71341-77660' '(at1g03140 : 443.0) splicing factor Prp18 family protein; INVOLVED IN: RNA splicing; LOCATED IN: spliceosomal complex; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing factor 4 (PRP4) like (InterPro:IPR014906), Splicing factor motif (InterPro:IPR003648), Prp18 (InterPro:IPR004098); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54590.1); Has 624 Blast hits to 613 proteins in 206 species: Archae - 0; Bacteria - 5; Metazoa - 235; Fungi - 175; Plants - 58; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|38019 : 310.0) no description available & (gnl|cdd|66520 : 214.0) no description available & (reliability: 886.0) & (original description: Putative PRP18, Description = PRP18, PFAM = PF02840;PF08799)' T '27.1.1' 'RNA.processing.splicing' 'niben044scf00000071ctg007_24277-29256' '(at5g06160 : 329.0) Encodes a protein with similarity to pre-mRNA splicing factor SF3a60 that is involved in gametic cell fate determination. Loss of function results in the ectopic expression of egg cell makers suggesting a role in restriction of gametic cell fate. Expressed strongly in gametophytes and weakly in sporophytes.; ATROPOS (ATO); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of embryo sac egg cell differentiation; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type matrin (InterPro:IPR000690), Splicing factor SF3a60 binding domain (InterPro:IPR021966); Has 679 Blast hits to 673 proteins in 216 species: Archae - 0; Bacteria - 0; Metazoa - 330; Fungi - 136; Plants - 106; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|37847 : 217.0) no description available & (gnl|cdd|34787 : 87.5) no description available & (reliability: 658.0) & (original description: Putative ATO, Description = Splicing factor 3A subunit 3, PFAM = PF12108;PF16837)' T '27.1.1' 'RNA.processing.splicing' 'niben044scf00003978ctg030_8122-16476' '(at5g38600 : 330.0) Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: PSP, proline-rich (InterPro:IPR006568), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein (TAIR:AT1G67210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37884 : 151.0) no description available & (reliability: 660.0) & (original description: Putative At5g38600, Description = Proline-rich spliceosome-associated family protein / zinc knuckle (CCHC-type) family protein, PFAM = PF04046;PF00098)' T '27.1.1' 'RNA.processing.splicing' 'niben044scf00011208ctg001_5460-13457' '(at3g50670 : 253.0) Encodes U1 snRNP 70K; U1 small nuclear ribonucleoprotein-70K (U1-70K); FUNCTIONS IN: RNA binding, nucleotide binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U1 small nuclear ribonucleoprotein of 70kDa MW N-terminal (InterPro:IPR022023), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G43370.1); Has 501 Blast hits to 501 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 126; Plants - 97; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|35336 : 196.0) no description available & (reliability: 506.0) & (original description: Putative RNU1, Description = U1 small nuclear ribonucleoprotein 70 kDa, PFAM = PF12220;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben044scf00012053ctg018_6063-16860' '(at1g60900 : 630.0) U2 snRNP auxilliary factor, large subunit, splicing factor; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 snRNP auxilliary factor, large subunit, splicing factor (InterPro:IPR006529); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT4G36690.4); Has 95343 Blast hits to 42389 proteins in 1915 species: Archae - 82; Bacteria - 12197; Metazoa - 47091; Fungi - 9469; Plants - 8106; Viruses - 663; Other Eukaryotes - 17735 (source: NCBI BLink). & (gnl|cdd|35342 : 437.0) no description available & (reliability: 1260.0) & (original description: Putative spl8, Description = Splicing factor U2af large subunit B, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben044scf00012938ctg003_6748-11477' '(at5g51300 : 675.0) splicing factor-related; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), RNA recognition motif, RNP-1 (InterPro:IPR000504), K Homology, type 1 (InterPro:IPR004088), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G09660.1); Has 82686 Blast hits to 53020 proteins in 1818 species: Archae - 38; Bacteria - 8214; Metazoa - 37936; Fungi - 14163; Plants - 12444; Viruses - 1255; Other Eukaryotes - 8636 (source: NCBI BLink). & (gnl|cdd|35341 : 265.0) no description available & (gnl|cdd|29005 : 166.0) no description available & (reliability: 1350.0) & (original description: Putative bbp, Description = Branchpoint-bridging protein, PFAM = PF00013;PF00076;PF16275)' T '27.1.1' 'RNA.processing.splicing' 'niben044scf00021122ctg000_8330-14492' '(at5g64270 : 1957.0) splicing factor, putative; FUNCTIONS IN: binding; INVOLVED IN: mRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), Splicing factor 3B subunit 1 (InterPro:IPR015016), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35434 : 1699.0) no description available & (gnl|cdd|34780 : 1131.0) no description available & (reliability: 3914.0) & (original description: Putative SF3B1, Description = Splicing factor 3B subunit 1, PFAM = PF08920)' T '27.1.1' 'RNA.processing.splicing' 'niben044scf00022423ctg000_35287-45610' '(at3g11960 : 1001.0) Cleavage and polyadenylation specificity factor (CPSF) A subunit protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: damaged DNA binding protein 1A (TAIR:AT4G05420.2); Has 954 Blast hits to 777 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 323; Fungi - 233; Plants - 246; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (gnl|cdd|37109 : 450.0) no description available & (reliability: 2002.0) & (original description: Putative Sb02g006020, Description = Putative uncharacterized protein Sb02g006020, PFAM = PF10433)' T '27.1.1' 'RNA.processing.splicing' 'niben044scf00022423ctg001_1-5396' '(at3g11960 : 583.0) Cleavage and polyadenylation specificity factor (CPSF) A subunit protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: damaged DNA binding protein 1A (TAIR:AT4G05420.2); Has 954 Blast hits to 777 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 323; Fungi - 233; Plants - 246; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (gnl|cdd|37109 : 323.0) no description available & (reliability: 1166.0) & (original description: Putative At3g11960, Description = Cleavage and polyadenylation specificity factor (CPSF) A subunit protein, PFAM = PF03178)' T '27.1.1' 'RNA.processing.splicing' 'niben044scf00024628ctg005_8340-10741' '(at4g02400 : 107.0) U3 ribonucleoprotein (Utp) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: small-subunit processome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp14 (InterPro:IPR006709); BEST Arabidopsis thaliana protein match is: U3 ribonucleoprotein (Utp) family protein (TAIR:AT5G08600.2); Has 7468 Blast hits to 4514 proteins in 366 species: Archae - 14; Bacteria - 554; Metazoa - 2650; Fungi - 816; Plants - 392; Viruses - 146; Other Eukaryotes - 2896 (source: NCBI BLink). & (gnl|cdd|68196 : 103.0) no description available & (gnl|cdd|37383 : 87.8) no description available & (reliability: 214.0) & (original description: Putative Os03g0343300, Description = Os03g0343300 protein, PFAM = PF04615)' T '27.1.1' 'RNA.processing.splicing' 'niben044scf00028915ctg005_306-5056' '(at3g25440 : 292.0) RNA-binding CRS1 / YhbY (CRM) domain protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain protein (TAIR:AT4G13070.1); Has 777 Blast hits to 674 proteins in 113 species: Archae - 5; Bacteria - 24; Metazoa - 132; Fungi - 59; Plants - 343; Viruses - 36; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|37201 : 164.0) no description available & (gnl|cdd|85815 : 88.7) no description available & (reliability: 584.0) & (original description: Putative cfm6, Description = Putative CRM domain-containing protein, PFAM = PF01985)' T '27.1.1' 'RNA.processing.splicing' 'niben044scf00032836ctg000_3199-11311' '(at1g02840 : 249.0) SR1 is a plant homologue of the human general/alternative splicing factor SF2/ASF.; SR1; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: interchromatin granule, nuclear speck, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G02430.2); Has 35131 Blast hits to 21345 proteins in 1053 species: Archae - 12; Bacteria - 1352; Metazoa - 20795; Fungi - 3692; Plants - 3807; Viruses - 567; Other Eukaryotes - 4906 (source: NCBI BLink). & (gnl|cdd|35328 : 199.0) no description available & (gnl|cdd|47687 : 81.0) no description available & (reliability: 498.0) & (original description: Putative srp31, Description = Pre-mRNA-splicing factor SF2, PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben044scf00034351ctg004_1-3673' '(at1g55310 : 125.0) Encodes a SR spliceosome protein that is localized to nuclear specks, interacts with SR45 and the U1-70K protein of the U1 snRNP, has sequence similar to human SC35 protein.; SC35-like splicing factor 33 (SR33); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 30A (TAIR:AT3G13570.1). & (reliability: 250.0) & (original description: Putative SCL25A, Description = Arginine/serine-rich splicing factor SCL25A transcript I, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben044scf00034539ctg000_16601-24794' '(at4g36690 : 632.0) ATU2AF65A; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 snRNP auxilliary factor, large subunit, splicing factor (InterPro:IPR006529); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT1G60900.1). & (gnl|cdd|35342 : 440.0) no description available & (reliability: 1264.0) & (original description: Putative spl8, Description = Splicing factor U2af large subunit B, PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben044scf00040867ctg009_10757-20862' '(at1g80070 : 3015.0) a genetic locus involved in embryogenesis. Mutations in this locus result in an abnormal suspensor and embryo lethality.; ABNORMAL SUSPENSOR 2 (SUS2); INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555), Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding (InterPro:IPR019581), Pre-mRNA-processing-splicing factor 8 (InterPro:IPR012591), PROCN (InterPro:IPR012592), Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding (InterPro:IPR019580), PRP8 domain IV core (InterPro:IPR021983), PRO, C-terminal (InterPro:IPR012984), RNA recognition motif, spliceosomal PrP8 (InterPro:IPR019582); BEST Arabidopsis thaliana protein match is: Pre-mRNA-processing-splicing factor (TAIR:AT4G38780.1); Has 828 Blast hits to 729 proteins in 312 species: Archae - 0; Bacteria - 2; Metazoa - 333; Fungi - 220; Plants - 69; Viruses - 2; Other Eukaryotes - 202 (source: NCBI BLink). & (gnl|cdd|37006 : 2905.0) no description available & (gnl|cdd|34777 : 2338.0) no description available & (reliability: 6030.0) & (original description: Putative Prpf8, Description = Pre-mRNA-processing-splicing factor 8, PFAM = PF10598;PF10596;PF10597;PF08083;PF08082)' T '27.1.1' 'RNA.processing.splicing' 'niben044scf00041481ctg003_1-9799' '(gnl|cdd|37464 : 267.0) no description available & (at1g60200 : 253.0) splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Splicing factor PWI (InterPro:IPR002483); Has 135188 Blast hits to 78111 proteins in 2910 species: Archae - 381; Bacteria - 16050; Metazoa - 59921; Fungi - 15870; Plants - 11369; Viruses - 1556; Other Eukaryotes - 30041 (source: NCBI BLink). & (gnl|cdd|47639 : 91.5) no description available & (reliability: 506.0) & (original description: Putative At1g60200, Description = Putative uncharacterized protein At1g60210, PFAM = PF00076;PF01480)' T '27.1.1' 'RNA.processing.splicing' 'niben044scf00043266ctg001_64966-71324' '(at1g03140 : 441.0) splicing factor Prp18 family protein; INVOLVED IN: RNA splicing; LOCATED IN: spliceosomal complex; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing factor 4 (PRP4) like (InterPro:IPR014906), Splicing factor motif (InterPro:IPR003648), Prp18 (InterPro:IPR004098); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54590.1); Has 624 Blast hits to 613 proteins in 206 species: Archae - 0; Bacteria - 5; Metazoa - 235; Fungi - 175; Plants - 58; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|38019 : 308.0) no description available & (gnl|cdd|66520 : 214.0) no description available & (reliability: 882.0) & (original description: Putative PRP18, Description = PRP18, PFAM = PF02840;PF08799)' T '27.1.1' 'RNA.processing.splicing' 'niben044scf00047179ctg002_2171-6585' '(at3g27550 : 371.0) RNA-binding CRS1 / YhbY (CRM) domain protein; FUNCTIONS IN: RNA binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain protein (TAIR:AT2G28480.1); Has 9740 Blast hits to 5375 proteins in 499 species: Archae - 16; Bacteria - 3620; Metazoa - 2600; Fungi - 970; Plants - 681; Viruses - 92; Other Eukaryotes - 1761 (source: NCBI BLink). & (gnl|cdd|37201 : 148.0) no description available & (gnl|cdd|85815 : 91.4) no description available & (reliability: 742.0) & (original description: Putative cfm6, Description = Putative CRM domain-containing protein, PFAM = PF01985)' T '27.1.1' 'RNA.processing.splicing' 'niben044scf00048777ctg000_2747-12028' '(gnl|cdd|35342 : 187.0) no description available & (at2g33440 : 137.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT1G60900.1); Has 807 Blast hits to 787 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 371; Fungi - 101; Plants - 250; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative At2g33435, Description = Putative ovule protein, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben044scf00050641ctg001_526-6518' '(at2g18510 : 427.0) embryo defective 2444 (emb2444); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 (TAIR:AT1G49760.2); Has 66829 Blast hits to 41224 proteins in 1633 species: Archae - 50; Bacteria - 5635; Metazoa - 30219; Fungi - 10282; Plants - 12025; Viruses - 917; Other Eukaryotes - 7701 (source: NCBI BLink). & (gnl|cdd|35353 : 339.0) no description available & (p28644|roc1_spiol : 97.4) 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) & (gnl|cdd|31068 : 87.8) no description available & (reliability: 854.0) & (original description: Putative SF3B4, Description = Splicing factor 3B subunit 4, PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben044scf00052867ctg001_8525-16643' '(at5g18810 : 131.0) encodes an SC35-like splicing factor of 28 kD localized to the nuclear specks.; SC35-like splicing factor 28 (SCL28); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nuclear speck, nucleus; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 30A (TAIR:AT3G13570.1); Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative SCL28, Description = Arginine/serine-rich splicing factor SCL28 transcript III, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben044scf00054521ctg005_1-6674' '(at5g52040 : 197.0) encodes an arginine/serine-rich splicing factor. transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined.; RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: spliceosomal complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: arginine/serine-rich splicing factor 35 (TAIR:AT4G25500.3); Has 11943 Blast hits to 9562 proteins in 408 species: Archae - 0; Bacteria - 134; Metazoa - 7691; Fungi - 1361; Plants - 1617; Viruses - 110; Other Eukaryotes - 1030 (source: NCBI BLink). & (gnl|cdd|35329 : 103.0) no description available & (reliability: 394.0) & (original description: Putative RS27, Description = rRNA adenine N(6)-methyltransferase, PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben044scf00056276ctg003_581-5971' '(at5g42820 : 296.0) U2 auxiliary factor small subunit. The atU2AF35b protein and its homolog, atU2AF35a, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions.; U2AF35B; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: photoperiodism, flowering; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 auxiliary factor small subunit (InterPro:IPR009145); BEST Arabidopsis thaliana protein match is: U2 snRNP auxiliary factor small subunit, putative (TAIR:AT1G27650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37413 : 256.0) no description available & (reliability: 592.0) & (original description: Putative u2AF, Description = Splicing factor U2AF 35 kDa subunit, PFAM = PF00076;PF00642)' T '27.1.1' 'RNA.processing.splicing' 'niben044scf00061332ctg000_1-3131' '(at3g19840 : 83.6) Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries.; pre-mRNA-processing protein 40C (PRP40C); CONTAINS InterPro DOMAIN/s: FF domain (InterPro:IPR002713), WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: pre-mRNA-processing protein 40A (TAIR:AT1G44910.2); Has 7513 Blast hits to 5748 proteins in 436 species: Archae - 33; Bacteria - 336; Metazoa - 3654; Fungi - 967; Plants - 481; Viruses - 7; Other Eukaryotes - 2035 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative , Description = Transcription elongation regulator 1, PFAM = PF00397)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf00087_333933-339275' '(at2g24590 : 140.0) RNA recognition motif and CCHC-type zinc finger domains containing protein; FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; LOCATED IN: nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: serine/arginine-rich 22 (TAIR:AT4G31580.2); Has 11952 Blast hits to 10510 proteins in 739 species: Archae - 6; Bacteria - 805; Metazoa - 6109; Fungi - 1395; Plants - 2528; Viruses - 91; Other Eukaryotes - 1018 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative RSZ22, Description = Serine/arginine-rich splicing factor RSZ22, PFAM = PF00076;PF00098)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf00154_531125-541229' '(at1g23860 : 142.0) Encodes a 9G8-like serine-arginine rich (SR) protein that interacts in vivo with U1-70K, a U1 small nuclear ribonucleoprotein 70-kDa protein that is involved in nuclear precursor mRNA processing.; RS-containing zinc finger protein 21 (RSZP21); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: serine/arginine-rich 22 (TAIR:AT4G31580.2). & (reliability: 284.0) & (original description: Putative RSZP21, Description = Serine/arginine-rich splicing factor RSZ21, PFAM = PF00076;PF00098)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf00180_1173937-1187007' '(at4g21660 : 648.0) proline-rich spliceosome-associated (PSP) family protein; INVOLVED IN: mRNA processing; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: PSP, proline-rich (InterPro:IPR006568), Protein of unknown function DUF382 (InterPro:IPR007180); BEST Arabidopsis thaliana protein match is: pliceosome associated protein-related (TAIR:AT1G11520.1). & (gnl|cdd|37541 : 432.0) no description available & (gnl|cdd|34781 : 245.0) no description available & (reliability: 1296.0) & (original description: Putative sap145, Description = Pre-mRNA-splicing factor sap145, PFAM = PF04037;PF04046)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf00298_55188-73379' '(at3g14100 : 433.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: oligouridylate-binding protein 1A (TAIR:AT1G54080.1); Has 33134 Blast hits to 32894 proteins in 1695 species: Archae - 47; Bacteria - 3311; Metazoa - 12038; Fungi - 6892; Plants - 9686; Viruses - 3; Other Eukaryotes - 1157 (source: NCBI BLink). & (gnl|cdd|35370 : 133.0) no description available & (reliability: 846.0) & (original description: Putative ouBP, Description = Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1, PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf00369_1037798-1148016' '(gnl|cdd|35328 : 221.0) no description available & (at1g02840 : 218.0) SR1 is a plant homologue of the human general/alternative splicing factor SF2/ASF.; SR1; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: interchromatin granule, nuclear speck, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G02430.2); Has 35131 Blast hits to 21345 proteins in 1053 species: Archae - 12; Bacteria - 1352; Metazoa - 20795; Fungi - 3692; Plants - 3807; Viruses - 567; Other Eukaryotes - 4906 (source: NCBI BLink). & (gnl|cdd|47687 : 82.2) no description available & (reliability: 436.0) & (original description: Putative SR30, Description = Arginine/serine-rich splicing factor SR30 transcript VI, PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf00369_1138432-1147971' '(at1g09140 : 209.0) Encodes a serine-arginine rich RNA binding protein involved in regulation of splicing (including splicing of itself). Exists as 3 alternative spliced forms that are differentially expressed.; SERINE-ARGININE PROTEIN 30 (ATSRP30); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G02840.3); Has 23 Blast hits to 23 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|35328 : 203.0) no description available & (gnl|cdd|47687 : 83.0) no description available & (reliability: 418.0) & (original description: Putative sfrs1, Description = Pre-mRNA-splicing factor SF2, PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf00449_85389-92798' '(at3g55200 : 2260.0) Cleavage and polyadenylation specificity factor (CPSF) A subunit protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: WD40 repeat (InterPro:IPR001680), Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: Cleavage and polyadenylation specificity factor (CPSF) A subunit protein (TAIR:AT3G55220.1); Has 1074 Blast hits to 953 proteins in 223 species: Archae - 0; Bacteria - 2; Metazoa - 406; Fungi - 248; Plants - 228; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (gnl|cdd|37109 : 1594.0) no description available & (gnl|cdd|66828 : 228.0) no description available & (reliability: 4520.0) & (original description: Putative Sf3b3, Description = Splicing factor 3B subunit 3, PFAM = PF03178;PF10433)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf00487_142488-147819' '(at3g13570 : 131.0) encodes an SC35-like splicing factor of 30 kD that is localized to the nuclear specks.; SC35-like splicing factor 30A (SCL30A); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 33 (TAIR:AT1G55310.3); Has 39411 Blast hits to 22154 proteins in 1003 species: Archae - 84; Bacteria - 1991; Metazoa - 19033; Fungi - 3968; Plants - 4828; Viruses - 731; Other Eukaryotes - 8776 (source: NCBI BLink). & (gnl|cdd|84495 : 84.9) no description available & (reliability: 262.0) & (original description: Putative SCL30A, Description = Serine/arginine-rich SC35-like splicing factor SCL30A, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf00494_872049-877993' '(at5g37370 : 399.0) encodes a putative splicing factor. Over-expression in yeast and Arabidopsis result in increased tolerance to high salt.; ATSRL1; FUNCTIONS IN: binding; INVOLVED IN: response to salt stress, RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PRP38 (InterPro:IPR005037). & (gnl|cdd|38099 : 302.0) no description available & (gnl|cdd|86306 : 127.0) no description available & (reliability: 798.0) & (original description: Putative ATSRL1, Description = At5g37370, PFAM = PF03371)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf00794_133184-140948' '(at5g18810 : 125.0) encodes an SC35-like splicing factor of 28 kD localized to the nuclear specks.; SC35-like splicing factor 28 (SCL28); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nuclear speck, nucleus; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 30A (TAIR:AT3G13570.1); Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative SR33, Description = Serine/arginine rich splicing factor, putative, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf00949_137153-141469' '(at5g42820 : 283.0) U2 auxiliary factor small subunit. The atU2AF35b protein and its homolog, atU2AF35a, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions.; U2AF35B; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: photoperiodism, flowering; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 auxiliary factor small subunit (InterPro:IPR009145); BEST Arabidopsis thaliana protein match is: U2 snRNP auxiliary factor small subunit, putative (TAIR:AT1G27650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37413 : 226.0) no description available & (reliability: 566.0) & (original description: Putative u2snRNP, Description = Putative U2 snRNP auxiliary factor, PFAM = PF00642;PF00642;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf01009_298394-303667' '(at2g37340 : 195.0) encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks.; arginine/serine-rich zinc knuckle-containing protein 33 (RSZ33); FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT3G53500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative RS2Z34, Description = Arginine/serine-rich splicing factor RS2Z34 transcript V, PFAM = PF00098;PF00098;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf01107_6734-13129' '(at5g54520 : 452.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G10580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35503 : 320.0) no description available & (gnl|cdd|29257 : 124.0) no description available & (reliability: 904.0) & (original description: Putative pco114009a, Description = Pre-mRNA-splicing factor PRP17, PFAM = PF00400;PF00400;PF00400;PF00400)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf01109_287792-293572' '(at3g49430 : 262.0) SER/ARG-rich protein 34A (SRp34a); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G02840.2). & (gnl|cdd|35328 : 223.0) no description available & (reliability: 524.0) & (original description: Putative srp31, Description = ASF/SF2-like pre-mRNA splicing factor SRP31, PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf01115_31190-40206' '(at2g47580 : 266.0) encodes spliceosomal protein U1A; spliceosomal protein U1A (U1A); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: response to salt stress, nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleolus, nucleus, U1 snRNP; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: U2 small nuclear ribonucleoprotein B (TAIR:AT2G30260.1); Has 2473 Blast hits to 2417 proteins in 290 species: Archae - 0; Bacteria - 37; Metazoa - 1259; Fungi - 517; Plants - 407; Viruses - 1; Other Eukaryotes - 252 (source: NCBI BLink). & (gnl|cdd|39407 : 248.0) no description available & (reliability: 532.0) & (original description: Putative U1A, Description = U1 small nuclear ribonucleoprotein A, PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf01133_1855729-1861948' '(at3g61860 : 236.0) encodes an arginine/serine-rich splicing factor. transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined.; RSP31; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck, spliceosomal complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G46610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35329 : 120.0) no description available & (reliability: 472.0) & (original description: Putative RS31, Description = Serine/arginine-rich splicing factor RS31, PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf01289_585128-600404' '(at5g44200 : 284.0) Encodes a nuclear cap-binding protein that forms a heterodimeric complex with ABH1 (ATCBP80) and is likely to participate in RNA metabolism. Its mRNA is ubiquitously expressed.Loss of function mutations suggest a role in processing of pri-miRNA and mRNA splicing.; CAP-binding protein 20 (CBP20); FUNCTIONS IN: RNA binding, RNA cap binding; INVOLVED IN: RNA metabolic process, RNA splicing, via endonucleolytic cleavage and ligation, primary microRNA processing; LOCATED IN: mRNA cap binding complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G46020.1); Has 9575 Blast hits to 9549 proteins in 2190 species: Archae - 96; Bacteria - 7682; Metazoa - 239; Fungi - 361; Plants - 280; Viruses - 2; Other Eukaryotes - 915 (source: NCBI BLink). & (gnl|cdd|35343 : 225.0) no description available & (reliability: 568.0) & (original description: Putative CBP20, Description = Nuclear cap-binding protein subunit 2, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf01368_75494-86221' '(at4g02400 : 565.0) U3 ribonucleoprotein (Utp) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: small-subunit processome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp14 (InterPro:IPR006709); BEST Arabidopsis thaliana protein match is: U3 ribonucleoprotein (Utp) family protein (TAIR:AT5G08600.2); Has 7468 Blast hits to 4514 proteins in 366 species: Archae - 14; Bacteria - 554; Metazoa - 2650; Fungi - 816; Plants - 392; Viruses - 146; Other Eukaryotes - 2896 (source: NCBI BLink). & (gnl|cdd|68196 : 408.0) no description available & (gnl|cdd|37383 : 193.0) no description available & (reliability: 1130.0) & (original description: Putative At4g02400, Description = U3 ribonucleoprotein family protein, PFAM = PF04615)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf01498_180893-233571' '(at5g44200 : 210.0) Encodes a nuclear cap-binding protein that forms a heterodimeric complex with ABH1 (ATCBP80) and is likely to participate in RNA metabolism. Its mRNA is ubiquitously expressed.Loss of function mutations suggest a role in processing of pri-miRNA and mRNA splicing.; CAP-binding protein 20 (CBP20); FUNCTIONS IN: RNA binding, RNA cap binding; INVOLVED IN: RNA metabolic process, RNA splicing, via endonucleolytic cleavage and ligation, primary microRNA processing; LOCATED IN: mRNA cap binding complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G46020.1); Has 9575 Blast hits to 9549 proteins in 2190 species: Archae - 96; Bacteria - 7682; Metazoa - 239; Fungi - 361; Plants - 280; Viruses - 2; Other Eukaryotes - 915 (source: NCBI BLink). & (gnl|cdd|35343 : 210.0) no description available & (reliability: 420.0) & (original description: Putative Cbp20, Description = Nuclear cap-binding protein subunit 2, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf01498_222908-235281' '(at5g44200 : 242.0) Encodes a nuclear cap-binding protein that forms a heterodimeric complex with ABH1 (ATCBP80) and is likely to participate in RNA metabolism. Its mRNA is ubiquitously expressed.Loss of function mutations suggest a role in processing of pri-miRNA and mRNA splicing.; CAP-binding protein 20 (CBP20); FUNCTIONS IN: RNA binding, RNA cap binding; INVOLVED IN: RNA metabolic process, RNA splicing, via endonucleolytic cleavage and ligation, primary microRNA processing; LOCATED IN: mRNA cap binding complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G46020.1); Has 9575 Blast hits to 9549 proteins in 2190 species: Archae - 96; Bacteria - 7682; Metazoa - 239; Fungi - 361; Plants - 280; Viruses - 2; Other Eukaryotes - 915 (source: NCBI BLink). & (gnl|cdd|35343 : 213.0) no description available & (reliability: 484.0) & (original description: Putative ncbp2, Description = Nuclear cap-binding protein subunit 2, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf01498_222955-235304' '(at5g44200 : 258.0) Encodes a nuclear cap-binding protein that forms a heterodimeric complex with ABH1 (ATCBP80) and is likely to participate in RNA metabolism. Its mRNA is ubiquitously expressed.Loss of function mutations suggest a role in processing of pri-miRNA and mRNA splicing.; CAP-binding protein 20 (CBP20); FUNCTIONS IN: RNA binding, RNA cap binding; INVOLVED IN: RNA metabolic process, RNA splicing, via endonucleolytic cleavage and ligation, primary microRNA processing; LOCATED IN: mRNA cap binding complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G46020.1); Has 9575 Blast hits to 9549 proteins in 2190 species: Archae - 96; Bacteria - 7682; Metazoa - 239; Fungi - 361; Plants - 280; Viruses - 2; Other Eukaryotes - 915 (source: NCBI BLink). & (gnl|cdd|35343 : 227.0) no description available & (reliability: 516.0) & (original description: Putative Cbp20, Description = Nuclear cap-binding protein subunit 2, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf01734_248495-258438' '(at3g25440 : 282.0) RNA-binding CRS1 / YhbY (CRM) domain protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain protein (TAIR:AT4G13070.1); Has 777 Blast hits to 674 proteins in 113 species: Archae - 5; Bacteria - 24; Metazoa - 132; Fungi - 59; Plants - 343; Viruses - 36; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|37201 : 158.0) no description available & (gnl|cdd|85815 : 88.7) no description available & (reliability: 564.0) & (original description: Putative cfm6, Description = Putative CRM domain-containing protein, PFAM = PF01985)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf01841_159887-164119' '(at3g27550 : 366.0) RNA-binding CRS1 / YhbY (CRM) domain protein; FUNCTIONS IN: RNA binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain protein (TAIR:AT2G28480.1); Has 9740 Blast hits to 5375 proteins in 499 species: Archae - 16; Bacteria - 3620; Metazoa - 2600; Fungi - 970; Plants - 681; Viruses - 92; Other Eukaryotes - 1761 (source: NCBI BLink). & (gnl|cdd|37201 : 153.0) no description available & (gnl|cdd|85815 : 92.1) no description available & (reliability: 732.0) & (original description: Putative cfm6, Description = Putative CRM domain-containing protein, PFAM = PF01985)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf01918_556295-565278' '(at1g04510 : 691.0) Encodes MAC3A, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19. Associated with the MOS4-Associated Complex (MAC). Involved in plant innate immunity.; MOS4-associated complex 3A (MAC3A); FUNCTIONS IN: ubiquitin-protein ligase activity, nucleotide binding; INVOLVED IN: response to cadmium ion, defense response to bacterium; LOCATED IN: nucleolus, nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), U box domain (InterPro:IPR003613), WD40 repeat (InterPro:IPR001680), Pre-mRNA-splicing factor 19 (InterPro:IPR013915), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated complex 3B (TAIR:AT2G33340.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35510 : 487.0) no description available & (gnl|cdd|29257 : 165.0) no description available & (p93107|pf20_chlre : 88.6) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1382.0) & (original description: Putative PRP19, Description = Pre-mRNA-processing factor 19, PFAM = PF00400;PF00400;PF00400;PF00400;PF08606)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf01941_56186-88645' '(at1g60900 : 520.0) U2 snRNP auxilliary factor, large subunit, splicing factor; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 snRNP auxilliary factor, large subunit, splicing factor (InterPro:IPR006529); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT4G36690.4); Has 95343 Blast hits to 42389 proteins in 1915 species: Archae - 82; Bacteria - 12197; Metazoa - 47091; Fungi - 9469; Plants - 8106; Viruses - 663; Other Eukaryotes - 17735 (source: NCBI BLink). & (gnl|cdd|35342 : 358.0) no description available & (reliability: 1040.0) & (original description: Putative spl8, Description = Splicing factor U2af large subunit B, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf01991_30305-47798' '(at5g16180 : 655.0) ortholog of maize chloroplast splicing factor CRS1 (CRS1); FUNCTIONS IN: RNA binding; INVOLVED IN: Group II intron splicing; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: CRS1 / YhbY (CRM) domain-containing protein (TAIR:AT3G18390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37201 : 332.0) no description available & (gnl|cdd|85815 : 84.4) no description available & (reliability: 1310.0) & (original description: Putative At5g16180, Description = Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic, PFAM = PF01985;PF01985;PF01985)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf01999_445459-457230' '(at1g74520 : 105.0) Part of the AtHVA22a family. Protein expression is ABA- and stress-inducible.; HVA22 homologue A (HVA22A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue C (TAIR:AT1G69700.1); Has 1523 Blast hits to 1523 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 215; Plants - 516; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|86250 : 99.5) no description available & (gnl|cdd|36936 : 87.4) no description available & (reliability: 208.0) & (original description: Putative PGSC0003DMG400030143, Description = HVA22-like protein, PFAM = PF12874;PF12874;PF12874;PF03134)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf02373_356855-364558' '(at5g64200 : 167.0) encodes an SC35-like splicing factor of 35 kD localized to the nuclear specks.; ortholog of human splicing factor SC35 (SC35); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: cytosol, nuclear speck, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 30A (TAIR:AT3G13570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39408 : 80.2) no description available & (reliability: 334.0) & (original description: Putative SC26, Description = Arginine/serine-rich splicing factor SC26 transcript III, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf02373_435812-443554' '(at5g64200 : 163.0) encodes an SC35-like splicing factor of 35 kD localized to the nuclear specks.; ortholog of human splicing factor SC35 (SC35); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: cytosol, nuclear speck, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 30A (TAIR:AT3G13570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39408 : 84.4) no description available & (reliability: 326.0) & (original description: Putative sclp, Description = Putative arginine/serine-rich splicing factor, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf02381_774008-790565' '(at5g16180 : 647.0) ortholog of maize chloroplast splicing factor CRS1 (CRS1); FUNCTIONS IN: RNA binding; INVOLVED IN: Group II intron splicing; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: CRS1 / YhbY (CRM) domain-containing protein (TAIR:AT3G18390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37201 : 338.0) no description available & (gnl|cdd|85815 : 87.1) no description available & (reliability: 1294.0) & (original description: Putative At5g16180, Description = Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic, PFAM = PF01985;PF01985;PF01985)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf02426_330018-375439' '(at3g19840 : 573.0) Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries.; pre-mRNA-processing protein 40C (PRP40C); CONTAINS InterPro DOMAIN/s: FF domain (InterPro:IPR002713), WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: pre-mRNA-processing protein 40A (TAIR:AT1G44910.2); Has 7513 Blast hits to 5748 proteins in 436 species: Archae - 33; Bacteria - 336; Metazoa - 3654; Fungi - 967; Plants - 481; Viruses - 7; Other Eukaryotes - 2035 (source: NCBI BLink). & (gnl|cdd|35377 : 400.0) no description available & (gnl|cdd|34707 : 86.0) no description available & (reliability: 1146.0) & (original description: Putative BnaC05g32820D, Description = BnaC05g32820D protein, PFAM = PF01846;PF01846;PF01846;PF01846;PF01846;PF00397)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf02426_366708-370051' '(at3g19840 : 101.0) Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries.; pre-mRNA-processing protein 40C (PRP40C); CONTAINS InterPro DOMAIN/s: FF domain (InterPro:IPR002713), WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: pre-mRNA-processing protein 40A (TAIR:AT1G44910.2); Has 7513 Blast hits to 5748 proteins in 436 species: Archae - 33; Bacteria - 336; Metazoa - 3654; Fungi - 967; Plants - 481; Viruses - 7; Other Eukaryotes - 2035 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative MED35C, Description = Transcription elongation regulator 1, PFAM = PF01846)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf02513_267612-275890' '(at5g64200 : 196.0) encodes an SC35-like splicing factor of 35 kD localized to the nuclear specks.; ortholog of human splicing factor SC35 (SC35); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: cytosol, nuclear speck, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 30A (TAIR:AT3G13570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39408 : 119.0) no description available & (reliability: 392.0) & (original description: Putative SC26, Description = Arginine/serine-rich splicing factor SC26 transcript III, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf02513_487949-491852' '(at4g13070 : 287.0) RNA-binding CRS1 / YhbY (CRM) domain protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain protein (TAIR:AT2G28480.1); Has 317 Blast hits to 276 proteins in 27 species: Archae - 2; Bacteria - 4; Metazoa - 5; Fungi - 0; Plants - 270; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|37201 : 169.0) no description available & (gnl|cdd|85815 : 86.0) no description available & (reliability: 574.0) & (original description: Putative cfm6, Description = Putative CRM domain-containing protein, PFAM = PF01985)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf02839_117666-135037' '(at5g06160 : 640.0) Encodes a protein with similarity to pre-mRNA splicing factor SF3a60 that is involved in gametic cell fate determination. Loss of function results in the ectopic expression of egg cell makers suggesting a role in restriction of gametic cell fate. Expressed strongly in gametophytes and weakly in sporophytes.; ATROPOS (ATO); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of embryo sac egg cell differentiation; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type matrin (InterPro:IPR000690), Splicing factor SF3a60 binding domain (InterPro:IPR021966); Has 679 Blast hits to 673 proteins in 216 species: Archae - 0; Bacteria - 0; Metazoa - 330; Fungi - 136; Plants - 106; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|37847 : 517.0) no description available & (gnl|cdd|34787 : 219.0) no description available & (reliability: 1280.0) & (original description: Putative ATO, Description = Splicing factor SF3a60 homolog, PFAM = PF13297;PF11931;PF12108;PF16837)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf02939_156100-162294' '(at1g04510 : 202.0) Encodes MAC3A, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19. Associated with the MOS4-Associated Complex (MAC). Involved in plant innate immunity.; MOS4-associated complex 3A (MAC3A); FUNCTIONS IN: ubiquitin-protein ligase activity, nucleotide binding; INVOLVED IN: response to cadmium ion, defense response to bacterium; LOCATED IN: nucleolus, nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), U box domain (InterPro:IPR003613), WD40 repeat (InterPro:IPR001680), Pre-mRNA-splicing factor 19 (InterPro:IPR013915), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated complex 3B (TAIR:AT2G33340.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35510 : 181.0) no description available & (reliability: 402.0) & (original description: Putative prp19, Description = Pre-mRNA-processing factor 19, PFAM = PF08606;PF04564)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf03066_209637-220199' '(gnl|cdd|37464 : 257.0) no description available & (at1g60200 : 243.0) splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Splicing factor PWI (InterPro:IPR002483); Has 135188 Blast hits to 78111 proteins in 2910 species: Archae - 381; Bacteria - 16050; Metazoa - 59921; Fungi - 15870; Plants - 11369; Viruses - 1556; Other Eukaryotes - 30041 (source: NCBI BLink). & (gnl|cdd|47639 : 91.1) no description available & (reliability: 486.0) & (original description: Putative At1g60200, Description = Putative uncharacterized protein At1g60210, PFAM = PF00076;PF01480)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf03250_27816-32732' '(at4g25500 : 224.0) encodes an arginine/serine-rich splicing factor. transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined.; arginine/serine-rich splicing factor 35 (RSP35); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck, spliceosomal complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G52040.2). & (gnl|cdd|35329 : 103.0) no description available & (reliability: 448.0) & (original description: Putative RS40, Description = Serine/arginine-rich splicing factor RS40, PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf03405_263619-273246' '(at1g02840 : 246.0) SR1 is a plant homologue of the human general/alternative splicing factor SF2/ASF.; SR1; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: interchromatin granule, nuclear speck, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G02430.2); Has 35131 Blast hits to 21345 proteins in 1053 species: Archae - 12; Bacteria - 1352; Metazoa - 20795; Fungi - 3692; Plants - 3807; Viruses - 567; Other Eukaryotes - 4906 (source: NCBI BLink). & (gnl|cdd|35328 : 201.0) no description available & (reliability: 492.0) & (original description: Putative SR34, Description = Serine/arginine-rich-splicing factor SR34, PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf03693_373170-380780' '(at3g50670 : 254.0) Encodes U1 snRNP 70K; U1 small nuclear ribonucleoprotein-70K (U1-70K); FUNCTIONS IN: RNA binding, nucleotide binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U1 small nuclear ribonucleoprotein of 70kDa MW N-terminal (InterPro:IPR022023), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G43370.1); Has 501 Blast hits to 501 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 126; Plants - 97; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|35336 : 215.0) no description available & (reliability: 508.0) & (original description: Putative RNU1, Description = U1 small nuclear ribonucleoprotein 70 kDa, PFAM = PF00076;PF12220)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf03693_692813-701268' '(at4g36690 : 633.0) ATU2AF65A; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 snRNP auxilliary factor, large subunit, splicing factor (InterPro:IPR006529); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT1G60900.1). & (gnl|cdd|35342 : 449.0) no description available & (reliability: 1266.0) & (original description: Putative spl8, Description = Splicing factor U2af large subunit B, PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf03945_84146-87951' '(at4g25500 : 135.0) encodes an arginine/serine-rich splicing factor. transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined.; arginine/serine-rich splicing factor 35 (RSP35); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck, spliceosomal complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G52040.2). & (gnl|cdd|35329 : 96.6) no description available & (reliability: 270.0) & (original description: Putative RS27, Description = rRNA adenine N(6)-methyltransferase, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf04119_146665-165150' '(at1g10320 : 362.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition, domain 1 (InterPro:IPR003954), U2 auxiliary factor small subunit (InterPro:IPR009145); BEST Arabidopsis thaliana protein match is: U2 snRNP auxiliary factor small subunit, putative (TAIR:AT1G27650.1); Has 103377 Blast hits to 43645 proteins in 2110 species: Archae - 258; Bacteria - 11294; Metazoa - 44927; Fungi - 9113; Plants - 5313; Viruses - 581; Other Eukaryotes - 31891 (source: NCBI BLink). & (gnl|cdd|37413 : 169.0) no description available & (reliability: 724.0) & (original description: Putative U2AFM, Description = U2AFM, PFAM = PF00642;PF00642;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf04193_628630-637869' '(at1g65660 : 689.0) Encodes a CCHC zinc finger protein that may function as a step II splicing factor. In an epigenetic allele of SMP1 (in which SMP1 and SMP2 mRNA is reduced) organs are smaller and contain fewer cells.; SWELLMAP 1 (SMP1); CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Pre-mRNA splicing Prp18-interacting factor (InterPro:IPR021715); BEST Arabidopsis thaliana protein match is: Pre-mRNA splicing Prp18-interacting factor (TAIR:AT4G37120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37771 : 578.0) no description available & (reliability: 1378.0) & (original description: Putative slu7, Description = Pre-mRNA-splicing factor SLU7, PFAM = PF11708)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf04240_273173-289213' '(at4g36690 : 619.0) ATU2AF65A; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 snRNP auxilliary factor, large subunit, splicing factor (InterPro:IPR006529); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT1G60900.1). & (gnl|cdd|35342 : 438.0) no description available & (reliability: 1238.0) & (original description: Putative spl8, Description = Splicing factor U2af large subunit B, PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf04384_563907-578093' '(at4g21660 : 642.0) proline-rich spliceosome-associated (PSP) family protein; INVOLVED IN: mRNA processing; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: PSP, proline-rich (InterPro:IPR006568), Protein of unknown function DUF382 (InterPro:IPR007180); BEST Arabidopsis thaliana protein match is: pliceosome associated protein-related (TAIR:AT1G11520.1). & (gnl|cdd|37541 : 417.0) no description available & (gnl|cdd|34781 : 239.0) no description available & (reliability: 1284.0) & (original description: Putative sap145, Description = Pre-mRNA-splicing factor sap145, PFAM = PF04037;PF04046)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf04422_328919-335277' '(at3g13570 : 132.0) encodes an SC35-like splicing factor of 30 kD that is localized to the nuclear specks.; SC35-like splicing factor 30A (SCL30A); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 33 (TAIR:AT1G55310.3); Has 39411 Blast hits to 22154 proteins in 1003 species: Archae - 84; Bacteria - 1991; Metazoa - 19033; Fungi - 3968; Plants - 4828; Viruses - 731; Other Eukaryotes - 8776 (source: NCBI BLink). & (gnl|cdd|84495 : 81.0) no description available & (reliability: 264.0) & (original description: Putative SCL25A, Description = Arginine/serine-rich splicing factor SCL25A transcript I, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf04749_125722-134029' '(at2g47580 : 252.0) encodes spliceosomal protein U1A; spliceosomal protein U1A (U1A); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: response to salt stress, nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleolus, nucleus, U1 snRNP; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: U2 small nuclear ribonucleoprotein B (TAIR:AT2G30260.1); Has 2473 Blast hits to 2417 proteins in 290 species: Archae - 0; Bacteria - 37; Metazoa - 1259; Fungi - 517; Plants - 407; Viruses - 1; Other Eukaryotes - 252 (source: NCBI BLink). & (gnl|cdd|39407 : 248.0) no description available & (reliability: 504.0) & (original description: Putative U1A, Description = U1 small nuclear ribonucleoprotein A, PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf04925_617-14294' '(at2g24590 : 122.0) RNA recognition motif and CCHC-type zinc finger domains containing protein; FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; LOCATED IN: nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: serine/arginine-rich 22 (TAIR:AT4G31580.2); Has 11952 Blast hits to 10510 proteins in 739 species: Archae - 6; Bacteria - 805; Metazoa - 6109; Fungi - 1395; Plants - 2528; Viruses - 91; Other Eukaryotes - 1018 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative RSZ22, Description = Serine/arginine-rich splicing factor RSZ22, PFAM = PF00076;PF00098)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf05188_9280-14803' '(at3g23325 : 172.0) Splicing factor 3B subunit 5/RDS3 complex subunit 10; CONTAINS InterPro DOMAIN/s: Splicing factor 3B subunit 5/RDS3 complex subunit 10 (InterPro:IPR009846), Splicing factor 3B, subunit 5 (InterPro:IPR017089); BEST Arabidopsis thaliana protein match is: Splicing factor 3B subunit 5/RDS3 complex subunit 10 (TAIR:AT4G14342.1); Has 334 Blast hits to 334 proteins in 171 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 97; Plants - 62; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|70645 : 151.0) no description available & (gnl|cdd|38695 : 135.0) no description available & (reliability: 344.0) & (original description: Putative sf3b5, Description = Splicing factor 3B subunit 5, PFAM = PF07189)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf05298_434102-446284' '(at1g09140 : 209.0) Encodes a serine-arginine rich RNA binding protein involved in regulation of splicing (including splicing of itself). Exists as 3 alternative spliced forms that are differentially expressed.; SERINE-ARGININE PROTEIN 30 (ATSRP30); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G02840.3); Has 23 Blast hits to 23 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|35328 : 204.0) no description available & (gnl|cdd|84495 : 83.0) no description available & (reliability: 418.0) & (original description: Putative srp32, Description = ASF/SF2-like pre-mRNA splicing factor SRP32'', PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf05306_288341-293600' '(at2g37340 : 200.0) encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks.; arginine/serine-rich zinc knuckle-containing protein 33 (RSZ33); FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT3G53500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 400.0) & (original description: Putative RS2Z34, Description = Arginine/serine-rich splicing factor RS2Z34 transcript V, PFAM = PF00098;PF00098;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf05343_68555-74483' '(at3g49430 : 274.0) SER/ARG-rich protein 34A (SRp34a); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G02840.2). & (gnl|cdd|35328 : 231.0) no description available & (reliability: 548.0) & (original description: Putative Srsf9, Description = Serine/arginine-rich splicing factor 9, PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf05610_156748-164516' '(at3g50670 : 283.0) Encodes U1 snRNP 70K; U1 small nuclear ribonucleoprotein-70K (U1-70K); FUNCTIONS IN: RNA binding, nucleotide binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U1 small nuclear ribonucleoprotein of 70kDa MW N-terminal (InterPro:IPR022023), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G43370.1); Has 501 Blast hits to 501 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 126; Plants - 97; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|35336 : 212.0) no description available & (reliability: 566.0) & (original description: Putative RNU1, Description = U1 small nuclear ribonucleoprotein 70 kDa, PFAM = PF00076;PF12220)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf05822_661230-675045' '(at2g29210 : 181.0) splicing factor PWI domain-containing protein; INVOLVED IN: RNA splicing; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor PWI (InterPro:IPR002483); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G12440.1); Has 159601 Blast hits to 84623 proteins in 2432 species: Archae - 148; Bacteria - 15367; Metazoa - 68765; Fungi - 25678; Plants - 14277; Viruses - 2838; Other Eukaryotes - 32528 (source: NCBI BLink). & (gnl|cdd|79822 : 106.0) no description available & (gnl|cdd|37357 : 96.3) no description available & (reliability: 362.0) & (original description: Putative Srrm1, Description = Serine/arginine repetitive matrix protein 1, PFAM = PF01480)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf05961_221686-226788' '(at3g25440 : 292.0) RNA-binding CRS1 / YhbY (CRM) domain protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain protein (TAIR:AT4G13070.1); Has 777 Blast hits to 674 proteins in 113 species: Archae - 5; Bacteria - 24; Metazoa - 132; Fungi - 59; Plants - 343; Viruses - 36; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|37201 : 165.0) no description available & (gnl|cdd|85815 : 90.6) no description available & (reliability: 584.0) & (original description: Putative cfm6, Description = Putative CRM domain-containing protein, PFAM = PF01985)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf06207_142275-148503' '(at5g52040 : 215.0) encodes an arginine/serine-rich splicing factor. transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined.; RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: spliceosomal complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: arginine/serine-rich splicing factor 35 (TAIR:AT4G25500.3); Has 11943 Blast hits to 9562 proteins in 408 species: Archae - 0; Bacteria - 134; Metazoa - 7691; Fungi - 1361; Plants - 1617; Viruses - 110; Other Eukaryotes - 1030 (source: NCBI BLink). & (gnl|cdd|35329 : 113.0) no description available & (reliability: 430.0) & (original description: Putative RS40, Description = Serine/arginine-rich splicing factor RS40, PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf06350_125393-133166' '(at5g42820 : 300.0) U2 auxiliary factor small subunit. The atU2AF35b protein and its homolog, atU2AF35a, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions.; U2AF35B; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: photoperiodism, flowering; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 auxiliary factor small subunit (InterPro:IPR009145); BEST Arabidopsis thaliana protein match is: U2 snRNP auxiliary factor small subunit, putative (TAIR:AT1G27650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37413 : 255.0) no description available & (reliability: 600.0) & (original description: Putative u2AF, Description = Splicing factor U2AF 35 kDa subunit, PFAM = PF00076;PF00642;PF00642)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf06716_212261-218034' '(at5g64270 : 1954.0) splicing factor, putative; FUNCTIONS IN: binding; INVOLVED IN: mRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), Splicing factor 3B subunit 1 (InterPro:IPR015016), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35434 : 1699.0) no description available & (gnl|cdd|34780 : 1131.0) no description available & (reliability: 3908.0) & (original description: Putative SF3B1, Description = Splicing factor 3B subunit 1, PFAM = PF08920)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf06919_16265-33596' '(at3g25440 : 291.0) RNA-binding CRS1 / YhbY (CRM) domain protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain protein (TAIR:AT4G13070.1); Has 777 Blast hits to 674 proteins in 113 species: Archae - 5; Bacteria - 24; Metazoa - 132; Fungi - 59; Plants - 343; Viruses - 36; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|37201 : 166.0) no description available & (gnl|cdd|34727 : 103.0) no description available & (p04352|calm_chlre : 91.7) Calmodulin (CaM) - Chlamydomonas reinhardtii & (reliability: 582.0) & (original description: Putative cbp1, Description = Putative CRM domain-containing protein, PFAM = PF13499;PF13499;PF01985)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf06942_64200-71188' '(at2g30260 : 284.0) encodes U2B", which is a component of the U2 snRNP complex. Its precise role in pre-mRNA splicing is still unknown. It has been suggested that U2B0 may not be required for the splicing reaction itself but may have a role in U2 snRNP biogenesis. Deletion analysis of the U2B0 gene fusion has identified the N-terminal RNP-80 motif as sufficient for localization to the coiled body and the nucleus.; U2 small nuclear ribonucleoprotein B (U2B''); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: cis assembly of pre-catalytic spliceosome; LOCATED IN: nucleoplasm, Cajal body, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G06960.1); Has 1885 Blast hits to 1858 proteins in 260 species: Archae - 0; Bacteria - 2; Metazoa - 926; Fungi - 414; Plants - 327; Viruses - 1; Other Eukaryotes - 215 (source: NCBI BLink). & (gnl|cdd|39407 : 259.0) no description available & (reliability: 568.0) & (original description: Putative liz, Description = U2 small nuclear ribonucleoprotein B, PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf06942_65365-69694' '(at2g30260 : 149.0) encodes U2B", which is a component of the U2 snRNP complex. Its precise role in pre-mRNA splicing is still unknown. It has been suggested that U2B0 may not be required for the splicing reaction itself but may have a role in U2 snRNP biogenesis. Deletion analysis of the U2B0 gene fusion has identified the N-terminal RNP-80 motif as sufficient for localization to the coiled body and the nucleus.; U2 small nuclear ribonucleoprotein B (U2B''); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: cis assembly of pre-catalytic spliceosome; LOCATED IN: nucleoplasm, Cajal body, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G06960.1); Has 1885 Blast hits to 1858 proteins in 260 species: Archae - 0; Bacteria - 2; Metazoa - 926; Fungi - 414; Plants - 327; Viruses - 1; Other Eukaryotes - 215 (source: NCBI BLink). & (gnl|cdd|39407 : 130.0) no description available & (reliability: 298.0) & (original description: Putative liz, Description = U2 small nuclear ribonucleoprotein B, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf07227_83409-88465' '(at2g37340 : 184.0) encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks.; arginine/serine-rich zinc knuckle-containing protein 33 (RSZ33); FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT3G53500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative RS2Z32, Description = Serine/arginine-rich splicing factor RS2Z32, PFAM = PF00098;PF00098;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf07400_8088-17972' '(at1g10320 : 367.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition, domain 1 (InterPro:IPR003954), U2 auxiliary factor small subunit (InterPro:IPR009145); BEST Arabidopsis thaliana protein match is: U2 snRNP auxiliary factor small subunit, putative (TAIR:AT1G27650.1); Has 103377 Blast hits to 43645 proteins in 2110 species: Archae - 258; Bacteria - 11294; Metazoa - 44927; Fungi - 9113; Plants - 5313; Viruses - 581; Other Eukaryotes - 31891 (source: NCBI BLink). & (gnl|cdd|37413 : 166.0) no description available & (reliability: 734.0) & (original description: Putative u2AF, Description = mRNA splicing factor U2 associated factor, PFAM = PF00076;PF00642;PF00642)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf07402_206332-210342' '(at5g37370 : 233.0) encodes a putative splicing factor. Over-expression in yeast and Arabidopsis result in increased tolerance to high salt.; ATSRL1; FUNCTIONS IN: binding; INVOLVED IN: response to salt stress, RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PRP38 (InterPro:IPR005037). & (gnl|cdd|38099 : 191.0) no description available & (gnl|cdd|86306 : 100.0) no description available & (reliability: 466.0) & (original description: Putative Os05g0178900, Description = Os05g0178900 protein, PFAM = PF03371)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf08419_285-33267' '(at1g60900 : 520.0) U2 snRNP auxilliary factor, large subunit, splicing factor; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 snRNP auxilliary factor, large subunit, splicing factor (InterPro:IPR006529); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT4G36690.4); Has 95343 Blast hits to 42389 proteins in 1915 species: Archae - 82; Bacteria - 12197; Metazoa - 47091; Fungi - 9469; Plants - 8106; Viruses - 663; Other Eukaryotes - 17735 (source: NCBI BLink). & (gnl|cdd|35342 : 362.0) no description available & (reliability: 1040.0) & (original description: Putative SPL8, Description = U2 snRNP auxiliary factor, large subunit, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf08531_102570-157230' '(at5g44200 : 135.0) Encodes a nuclear cap-binding protein that forms a heterodimeric complex with ABH1 (ATCBP80) and is likely to participate in RNA metabolism. Its mRNA is ubiquitously expressed.Loss of function mutations suggest a role in processing of pri-miRNA and mRNA splicing.; CAP-binding protein 20 (CBP20); FUNCTIONS IN: RNA binding, RNA cap binding; INVOLVED IN: RNA metabolic process, RNA splicing, via endonucleolytic cleavage and ligation, primary microRNA processing; LOCATED IN: mRNA cap binding complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G46020.1); Has 9575 Blast hits to 9549 proteins in 2190 species: Archae - 96; Bacteria - 7682; Metazoa - 239; Fungi - 361; Plants - 280; Viruses - 2; Other Eukaryotes - 915 (source: NCBI BLink). & (gnl|cdd|35343 : 129.0) no description available & (reliability: 270.0) & (original description: Putative cbc2, Description = Nuclear cap-binding protein subunit 2, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf08562_24661-29836' '(at5g42820 : 296.0) U2 auxiliary factor small subunit. The atU2AF35b protein and its homolog, atU2AF35a, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions.; U2AF35B; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: photoperiodism, flowering; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 auxiliary factor small subunit (InterPro:IPR009145); BEST Arabidopsis thaliana protein match is: U2 snRNP auxiliary factor small subunit, putative (TAIR:AT1G27650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37413 : 252.0) no description available & (reliability: 592.0) & (original description: Putative u2AF, Description = Splicing factor U2AF 35 kDa subunit, PFAM = PF00642;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf08566_482161-491037' '(at5g64200 : 172.0) encodes an SC35-like splicing factor of 35 kD localized to the nuclear specks.; ortholog of human splicing factor SC35 (SC35); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: cytosol, nuclear speck, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 30A (TAIR:AT3G13570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39408 : 84.8) no description available & (reliability: 344.0) & (original description: Putative SC35, Description = Serine/arginine-rich splicing factor SC35, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf08653_561048-568491' '(at2g18510 : 416.0) embryo defective 2444 (emb2444); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 (TAIR:AT1G49760.2); Has 66829 Blast hits to 41224 proteins in 1633 species: Archae - 50; Bacteria - 5635; Metazoa - 30219; Fungi - 10282; Plants - 12025; Viruses - 917; Other Eukaryotes - 7701 (source: NCBI BLink). & (gnl|cdd|35353 : 341.0) no description available & (p19682|roc3_nicsy : 94.7) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47687 : 91.8) no description available & (reliability: 832.0) & (original description: Putative sf3b4, Description = Splicing factor 3B subunit 4, PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf10712_97893-104047' '(at2g37340 : 180.0) encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks.; arginine/serine-rich zinc knuckle-containing protein 33 (RSZ33); FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT3G53500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative RS2Z32, Description = Serine/arginine-rich splicing factor RS2Z32, PFAM = PF00098;PF00098;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf11037_1-10420' '(at1g02840 : 223.0) SR1 is a plant homologue of the human general/alternative splicing factor SF2/ASF.; SR1; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: interchromatin granule, nuclear speck, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G02430.2); Has 35131 Blast hits to 21345 proteins in 1053 species: Archae - 12; Bacteria - 1352; Metazoa - 20795; Fungi - 3692; Plants - 3807; Viruses - 567; Other Eukaryotes - 4906 (source: NCBI BLink). & (gnl|cdd|35328 : 201.0) no description available & (gnl|cdd|47687 : 81.8) no description available & (reliability: 446.0) & (original description: Putative srp32, Description = ASF/SF2-like pre-mRNA splicing factor SRP32'', PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf11167_53044-58755' '(at3g49430 : 239.0) SER/ARG-rich protein 34A (SRp34a); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G02840.2). & (gnl|cdd|35328 : 215.0) no description available & (reliability: 478.0) & (original description: Putative SR34A, Description = Serine/arginine-rich splicing factor SR34A, PFAM = PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf12383_201798-214425' '(gnl|cdd|37464 : 269.0) no description available & (at1g60200 : 268.0) splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Splicing factor PWI (InterPro:IPR002483); Has 135188 Blast hits to 78111 proteins in 2910 species: Archae - 381; Bacteria - 16050; Metazoa - 59921; Fungi - 15870; Plants - 11369; Viruses - 1556; Other Eukaryotes - 30041 (source: NCBI BLink). & (gnl|cdd|47639 : 85.7) no description available & (reliability: 536.0) & (original description: Putative At1g60200, Description = Putative uncharacterized protein At1g60210, PFAM = PF01480;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf12404_6118-19449' '(gnl|cdd|35342 : 187.0) no description available & (at2g33440 : 170.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT1G60900.1); Has 807 Blast hits to 787 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 371; Fungi - 101; Plants - 250; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative At2g33435, Description = Putative ovule protein, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf13002_81007-97162' '(at3g11960 : 693.0) Cleavage and polyadenylation specificity factor (CPSF) A subunit protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: damaged DNA binding protein 1A (TAIR:AT4G05420.2); Has 954 Blast hits to 777 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 323; Fungi - 233; Plants - 246; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (gnl|cdd|37109 : 326.0) no description available & (reliability: 1386.0) & (original description: Putative Sb02g006020, Description = Putative uncharacterized protein Sb02g006020, PFAM = PF10433;PF03178)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf13676_155-4620' '(at5g51300 : 725.0) splicing factor-related; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), RNA recognition motif, RNP-1 (InterPro:IPR000504), K Homology, type 1 (InterPro:IPR004088), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G09660.1); Has 82686 Blast hits to 53020 proteins in 1818 species: Archae - 38; Bacteria - 8214; Metazoa - 37936; Fungi - 14163; Plants - 12444; Viruses - 1255; Other Eukaryotes - 8636 (source: NCBI BLink). & (gnl|cdd|35341 : 273.0) no description available & (gnl|cdd|29005 : 163.0) no description available & (reliability: 1450.0) & (original description: Putative bbp, Description = Branchpoint-bridging protein, PFAM = PF16275;PF00076;PF00013)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf15657_136600-147075' '(at3g25440 : 271.0) RNA-binding CRS1 / YhbY (CRM) domain protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain protein (TAIR:AT4G13070.1); Has 777 Blast hits to 674 proteins in 113 species: Archae - 5; Bacteria - 24; Metazoa - 132; Fungi - 59; Plants - 343; Viruses - 36; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|37201 : 156.0) no description available & (gnl|cdd|85815 : 89.0) no description available & (reliability: 542.0) & (original description: Putative cfm6, Description = Putative CRM domain-containing protein, PFAM = PF01985)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf16498_95900-98268' '(at1g60900 : 181.0) U2 snRNP auxilliary factor, large subunit, splicing factor; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 snRNP auxilliary factor, large subunit, splicing factor (InterPro:IPR006529); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT4G36690.4); Has 95343 Blast hits to 42389 proteins in 1915 species: Archae - 82; Bacteria - 12197; Metazoa - 47091; Fungi - 9469; Plants - 8106; Viruses - 663; Other Eukaryotes - 17735 (source: NCBI BLink). & (gnl|cdd|35342 : 162.0) no description available & (reliability: 362.0) & (original description: Putative BnaCnng28730D, Description = BnaCnng28730D protein, PFAM = PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf16657_111795-121054' '(at1g17370 : 562.0) oligouridylate binding protein 1B (UBP1B); FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G14100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35370 : 197.0) no description available & (gnl|cdd|31068 : 89.7) no description available & (reliability: 1124.0) & (original description: Putative UBP1, Description = Oligouridylate-binding protein 1, PFAM = PF00076;PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf18000_52701-59422' '(at1g17370 : 608.0) oligouridylate binding protein 1B (UBP1B); FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G14100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35370 : 193.0) no description available & (gnl|cdd|31068 : 82.8) no description available & (reliability: 1216.0) & (original description: Putative UBP1B, Description = Oligouridylate-binding protein 1B, PFAM = PF00076;PF00076;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf19059_1672-8023' '(at4g02400 : 110.0) U3 ribonucleoprotein (Utp) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: small-subunit processome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp14 (InterPro:IPR006709); BEST Arabidopsis thaliana protein match is: U3 ribonucleoprotein (Utp) family protein (TAIR:AT5G08600.2); Has 7468 Blast hits to 4514 proteins in 366 species: Archae - 14; Bacteria - 554; Metazoa - 2650; Fungi - 816; Plants - 392; Viruses - 146; Other Eukaryotes - 2896 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative , Description = U3 small nucleolar RNA-associated protein, putative, PFAM = PF04615)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf19059_3453-6385' '(gnl|cdd|68196 : 104.0) no description available & (at4g02400 : 103.0) U3 ribonucleoprotein (Utp) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: small-subunit processome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp14 (InterPro:IPR006709); BEST Arabidopsis thaliana protein match is: U3 ribonucleoprotein (Utp) family protein (TAIR:AT5G08600.2); Has 7468 Blast hits to 4514 proteins in 366 species: Archae - 14; Bacteria - 554; Metazoa - 2650; Fungi - 816; Plants - 392; Viruses - 146; Other Eukaryotes - 2896 (source: NCBI BLink). & (gnl|cdd|37383 : 87.8) no description available & (reliability: 206.0) & (original description: Putative Os03g0343300, Description = Os03g0343300 protein, PFAM = PF04615)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf22781_21449-36726' '(at5g38600 : 327.0) Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: PSP, proline-rich (InterPro:IPR006568), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein (TAIR:AT1G67210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37884 : 149.0) no description available & (reliability: 654.0) & (original description: Putative At5g38600, Description = Proline-rich spliceosome-associated family protein / zinc knuckle (CCHC-type) family protein, PFAM = PF00098;PF04046)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf24096_133468-136783' '(at5g42820 : 334.0) U2 auxiliary factor small subunit. The atU2AF35b protein and its homolog, atU2AF35a, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions.; U2AF35B; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: photoperiodism, flowering; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 auxiliary factor small subunit (InterPro:IPR009145); BEST Arabidopsis thaliana protein match is: U2 snRNP auxiliary factor small subunit, putative (TAIR:AT1G27650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37413 : 254.0) no description available & (reliability: 668.0) & (original description: Putative u2AF, Description = Splicing factor U2AF 35 kDa subunit, PFAM = PF00642;PF00642;PF00076)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf27139_6515-18602' '(at1g04510 : 791.0) Encodes MAC3A, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19. Associated with the MOS4-Associated Complex (MAC). Involved in plant innate immunity.; MOS4-associated complex 3A (MAC3A); FUNCTIONS IN: ubiquitin-protein ligase activity, nucleotide binding; INVOLVED IN: response to cadmium ion, defense response to bacterium; LOCATED IN: nucleolus, nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), U box domain (InterPro:IPR003613), WD40 repeat (InterPro:IPR001680), Pre-mRNA-splicing factor 19 (InterPro:IPR013915), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated complex 3B (TAIR:AT2G33340.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35510 : 591.0) no description available & (gnl|cdd|29257 : 172.0) no description available & (p93107|pf20_chlre : 88.6) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1560.0) & (original description: Putative PRP19A, Description = Pre-mRNA-processing factor 19 homolog 1, PFAM = PF08606;PF00400;PF00400;PF00400;PF04564)' T '27.1.1' 'RNA.processing.splicing' 'niben101scf28259_91325-96055' '(at4g25500 : 195.0) encodes an arginine/serine-rich splicing factor. transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined.; arginine/serine-rich splicing factor 35 (RSP35); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck, spliceosomal complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G52040.2). & (gnl|cdd|35329 : 100.0) no description available & (reliability: 390.0) & (original description: Putative RS31, Description = Serine/arginine-rich splicing factor RS31, PFAM = PF00076;PF00076)' T '27.1.2' 'RNA.processing.RNA helicase' 'nbv0.3scaffold4469_59156-68307' '(at3g06480 : 734.0) DEAD box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase 1 (TAIR:AT3G01540.4); Has 132761 Blast hits to 82344 proteins in 3707 species: Archae - 865; Bacteria - 47475; Metazoa - 37917; Fungi - 12444; Plants - 11781; Viruses - 886; Other Eukaryotes - 21393 (source: NCBI BLink). & (p46942|db10_nicsy : 601.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|35552 : 545.0) no description available & (gnl|cdd|30859 : 425.0) no description available & (reliability: 1468.0) & (original description: Putative dbp2, Description = ATP-dependent RNA helicase DBP2, PFAM = PF00271;PF00397;PF00270)' T '27.1.2' 'RNA.processing.RNA helicase' 'nbv0.3scaffold4869_45905-48295' '(gnl|cdd|28928 : 108.0) no description available & (gnl|cdd|35555 : 105.0) no description available & (at2g47330 : 92.4) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G20920.1); Has 46798 Blast hits to 46047 proteins in 3085 species: Archae - 817; Bacteria - 24489; Metazoa - 6167; Fungi - 4661; Plants - 2616; Viruses - 11; Other Eukaryotes - 8037 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative mahe, Description = ATP-dependent RNA helicase p62, PFAM = PF00270)' T '27.1.2' 'RNA.processing.RNA helicase' 'nbv0.3scaffold5152_34457-52233' '(at5g47010 : 1913.0) Required for nonsense-mediated mRNA decay. Involved in RNA interference. lba1 mutants has reduced sugar-induced expression of Atb- amylase, is hypersensitive to glucose and abscisic acid and resistant to mannose, and shows early flowering, short day-sensitive growth, and seed germination phenotypes.; LOW-LEVEL BETA-AMYLASE 1 (LBA1); FUNCTIONS IN: in 6 functions; INVOLVED IN: sugar mediated signaling pathway, RNA interference, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, response to sucrose stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), RNA helicase UPF1, UPF2-interacting domain (InterPro:IPR018999); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1); Has 9640 Blast hits to 8330 proteins in 1330 species: Archae - 182; Bacteria - 2840; Metazoa - 3001; Fungi - 1369; Plants - 807; Viruses - 148; Other Eukaryotes - 1293 (source: NCBI BLink). & (gnl|cdd|37013 : 1364.0) no description available & (gnl|cdd|31309 : 365.0) no description available & (reliability: 3826.0) & (original description: Putative UPF1, Description = Regulator of nonsense transcripts 1 homolog, PFAM = PF13086;PF04851;PF09416;PF13087)' T '27.1.2' 'RNA.processing.RNA helicase' 'nbv0.3scaffold10326_12457-24988' '(gnl|cdd|36140 : 637.0) no description available & (at1g26370 : 503.0) RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), ATPase, AAA+ type, core (InterPro:IPR003593), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 9899 Blast hits to 9180 proteins in 1561 species: Archae - 2; Bacteria - 3369; Metazoa - 2309; Fungi - 1230; Plants - 848; Viruses - 465; Other Eukaryotes - 1676 (source: NCBI BLink). & (gnl|cdd|31829 : 447.0) no description available & (reliability: 1006.0) & (original description: Putative splh1, Description = DEAH-box nuclear pre-mRNA splicing factor, PFAM = PF04408;PF00271;PF07717)' T '27.1.2' 'RNA.processing.RNA helicase' 'nbv0.3scaffold11226_26437-35002' '(p46942|db10_nicsy : 1060.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (at3g01540 : 740.0) RNA HELICASE DRH1; DEAD box RNA helicase 1 (DRH1); FUNCTIONS IN: ATPase activity, ATP-dependent RNA helicase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase family protein (TAIR:AT5G14610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35552 : 546.0) no description available & (gnl|cdd|30859 : 403.0) no description available & (reliability: 1480.0) & (original description: Putative dbp2, Description = DEAD-box ATP-dependent RNA helicase 40, PFAM = PF00270;PF00271)' T '27.1.2' 'RNA.processing.RNA helicase' 'nbv0.3scaffold14754_1-7389' '(at5g63120 : 681.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G55150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35552 : 583.0) no description available & (p46942|db10_nicsy : 418.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|30859 : 399.0) no description available & (reliability: 1256.0) & (original description: Putative RH20, Description = DEAD-box ATP-dependent RNA helicase 20, PFAM = PF00270;PF00271)' T '27.1.2' 'RNA.processing.RNA helicase' 'nbv0.3scaffold24983_25017-28976' '(at2g33730 : 933.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G28180.1); Has 125674 Blast hits to 72393 proteins in 3317 species: Archae - 1039; Bacteria - 55089; Metazoa - 31149; Fungi - 11223; Plants - 5926; Viruses - 327; Other Eukaryotes - 20921 (source: NCBI BLink). & (gnl|cdd|35554 : 722.0) no description available & (gnl|cdd|30859 : 345.0) no description available & (p46942|db10_nicsy : 292.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1866.0) & (original description: Putative RH21, Description = DEAD-box ATP-dependent RNA helicase 21, PFAM = PF00270;PF00271)' T '27.1.2' 'RNA.processing.RNA helicase' 'nbv0.3scaffold27087_2176-11434' '(at2g42520 : 763.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G58510.3); Has 140248 Blast hits to 67514 proteins in 3679 species: Archae - 1004; Bacteria - 58923; Metazoa - 37605; Fungi - 9665; Plants - 13202; Viruses - 1099; Other Eukaryotes - 18750 (source: NCBI BLink). & (gnl|cdd|35556 : 603.0) no description available & (gnl|cdd|30859 : 390.0) no description available & (p46942|db10_nicsy : 322.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1526.0) & (original description: Putative RH37, Description = DEAD-box ATP-dependent RNA helicase 37, PFAM = PF00271;PF00270)' T '27.1.2' 'RNA.processing.RNA helicase' 'nbv0.3scaffold35440_14231-21839' '(at1g24090 : 306.0) RNase H family protein; FUNCTIONS IN: ribonuclease H activity, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT5G51080.2); Has 3412 Blast hits to 3412 proteins in 738 species: Archae - 71; Bacteria - 1533; Metazoa - 7; Fungi - 2; Plants - 1270; Viruses - 0; Other Eukaryotes - 529 (source: NCBI BLink). & (gnl|cdd|82165 : 113.0) no description available & (reliability: 554.0) & (original description: Putative At1g24090, Description = RNase H domain-containing protein, PFAM = PF13456)' T '27.1.2' 'RNA.processing.RNA helicase' 'nbv0.3scaffold38179_12903-18092' '(at5g08020 : 835.0) Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair.; RPA70-kDa subunit B (RPA70B); FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: DNA repair, response to UV-B, DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Replication factor-a protein 1 Rpa1 (InterPro:IPR004591), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication factor A, C-terminal (InterPro:IPR013955), Replication factor-A protein 1, N-terminal (InterPro:IPR007199); BEST Arabidopsis thaliana protein match is: Replication factor-A protein 1-related (TAIR:AT5G61000.1); Has 1056 Blast hits to 1045 proteins in 226 species: Archae - 10; Bacteria - 0; Metazoa - 213; Fungi - 147; Plants - 535; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|72071 : 171.0) no description available & (reliability: 1600.0) & (original description: Putative RPA1B, Description = Replication protein A 70 kDa DNA-binding subunit B, PFAM = PF16900;PF04057;PF01336;PF08646)' T '27.1.2' 'RNA.processing.RNA helicase' 'nbv0.3scaffold65967_1-7641' '(at1g63250 : 830.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G07750.1); Has 39480 Blast hits to 38845 proteins in 2963 species: Archae - 566; Bacteria - 19506; Metazoa - 5817; Fungi - 4606; Plants - 2531; Viruses - 8; Other Eukaryotes - 6446 (source: NCBI BLink). & (gnl|cdd|35563 : 533.0) no description available & (gnl|cdd|30859 : 295.0) no description available & (p46942|db10_nicsy : 154.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1660.0) & (original description: Putative BnaA09g12550D, Description = BnaA09g12550D protein, PFAM = PF00271;PF00270)' T '27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold33_1073777-1078632' '(gnl|cdd|36141 : 1188.0) no description available & (at1g32490 : 1107.0) Encodes a homolog of the yeast PRP2 protein, one of four related DEAH RNA helicases identified as essential cofactors for RNA splicing.; ENHANCED SILENCING PHENOTYPE 3 (ESP3); FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: RNA splicing, posttranscriptional gene silencing by RNA, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: helicase domain-containing protein (TAIR:AT2G35340.1). & (gnl|cdd|31829 : 661.0) no description available & (reliability: 2214.0) & (original description: Putative prp8, Description = Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, PFAM = PF07717;PF00271;PF04408)' T '27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold380_50563-59630' '(at1g24090 : 292.0) RNase H family protein; FUNCTIONS IN: ribonuclease H activity, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT5G51080.2); Has 3412 Blast hits to 3412 proteins in 738 species: Archae - 71; Bacteria - 1533; Metazoa - 7; Fungi - 2; Plants - 1270; Viruses - 0; Other Eukaryotes - 529 (source: NCBI BLink). & (gnl|cdd|82165 : 116.0) no description available & (reliability: 570.0) & (original description: Putative rnhA, Description = Ribonuclease H1, N-terminal, PFAM = PF13456)' T '27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold655_129893-137533' '(p46942|db10_nicsy : 719.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (at3g01540 : 671.0) RNA HELICASE DRH1; DEAD box RNA helicase 1 (DRH1); FUNCTIONS IN: ATPase activity, ATP-dependent RNA helicase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase family protein (TAIR:AT5G14610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35552 : 546.0) no description available & (gnl|cdd|30859 : 404.0) no description available & (reliability: 1342.0) & (original description: Putative dbp2, Description = DEAD-box ATP-dependent RNA helicase 40, PFAM = PF00271;PF00270)' T '27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold782_553423-573256' '(at5g47010 : 1688.0) Required for nonsense-mediated mRNA decay. Involved in RNA interference. lba1 mutants has reduced sugar-induced expression of Atb- amylase, is hypersensitive to glucose and abscisic acid and resistant to mannose, and shows early flowering, short day-sensitive growth, and seed germination phenotypes.; LOW-LEVEL BETA-AMYLASE 1 (LBA1); FUNCTIONS IN: in 6 functions; INVOLVED IN: sugar mediated signaling pathway, RNA interference, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, response to sucrose stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), RNA helicase UPF1, UPF2-interacting domain (InterPro:IPR018999); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1); Has 9640 Blast hits to 8330 proteins in 1330 species: Archae - 182; Bacteria - 2840; Metazoa - 3001; Fungi - 1369; Plants - 807; Viruses - 148; Other Eukaryotes - 1293 (source: NCBI BLink). & (gnl|cdd|37013 : 1101.0) no description available & (gnl|cdd|87961 : 279.0) no description available & (reliability: 3376.0) & (original description: Putative UPF1, Description = Regulator of nonsense transcripts 1 homolog, PFAM = PF13087;PF13087;PF04851;PF09416;PF13086)' T '27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold873_243631-256171' '(gnl|cdd|36140 : 656.0) no description available & (at1g26370 : 500.0) RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), ATPase, AAA+ type, core (InterPro:IPR003593), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 9899 Blast hits to 9180 proteins in 1561 species: Archae - 2; Bacteria - 3369; Metazoa - 2309; Fungi - 1230; Plants - 848; Viruses - 465; Other Eukaryotes - 1676 (source: NCBI BLink). & (gnl|cdd|31829 : 463.0) no description available & (reliability: 1000.0) & (original description: Putative splh1, Description = DEAH-box nuclear pre-mRNA splicing factor, PFAM = PF07717;PF04408;PF00271)' T '27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold1900_51930-69377' '(at5g47010 : 1878.0) Required for nonsense-mediated mRNA decay. Involved in RNA interference. lba1 mutants has reduced sugar-induced expression of Atb- amylase, is hypersensitive to glucose and abscisic acid and resistant to mannose, and shows early flowering, short day-sensitive growth, and seed germination phenotypes.; LOW-LEVEL BETA-AMYLASE 1 (LBA1); FUNCTIONS IN: in 6 functions; INVOLVED IN: sugar mediated signaling pathway, RNA interference, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, response to sucrose stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), RNA helicase UPF1, UPF2-interacting domain (InterPro:IPR018999); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1); Has 9640 Blast hits to 8330 proteins in 1330 species: Archae - 182; Bacteria - 2840; Metazoa - 3001; Fungi - 1369; Plants - 807; Viruses - 148; Other Eukaryotes - 1293 (source: NCBI BLink). & (gnl|cdd|37013 : 1356.0) no description available & (gnl|cdd|31309 : 361.0) no description available & (reliability: 3756.0) & (original description: Putative UPF1, Description = Regulator of nonsense transcripts 1 homolog, PFAM = PF04851;PF13086;PF13087;PF09416)' T '27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold1986_282004-295478' '(at3g22330 : 457.0) DEAD-box protein required for efficient group II intron splicing in mitochondria.; putative mitochondrial RNA helicase 2 (PMH2); FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cold, Group II intron splicing; LOCATED IN: mitochondrion, nucleolus, cell wall, protein complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) (TAIR:AT5G26742.2); Has 113280 Blast hits to 72794 proteins in 3598 species: Archae - 1390; Bacteria - 52148; Metazoa - 22767; Fungi - 9352; Plants - 8202; Viruses - 661; Other Eukaryotes - 18760 (source: NCBI BLink). & (gnl|cdd|35552 : 334.0) no description available & (gnl|cdd|30859 : 295.0) no description available & (q41382|rh7_spiol : 254.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 914.0) & (original description: Putative ddx21, Description = DEAD-box ATP-dependent RNA helicase 53, PFAM = PF00271;PF00270)' T '27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold2103_337275-347509' '(at1g24090 : 266.0) RNase H family protein; FUNCTIONS IN: ribonuclease H activity, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT5G51080.2); Has 3412 Blast hits to 3412 proteins in 738 species: Archae - 71; Bacteria - 1533; Metazoa - 7; Fungi - 2; Plants - 1270; Viruses - 0; Other Eukaryotes - 529 (source: NCBI BLink). & (gnl|cdd|82165 : 116.0) no description available & (reliability: 510.0) & (original description: Putative Sb07g023590, Description = Putative uncharacterized protein Sb07g023590, PFAM = PF13456)' T '27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold2319_456901-466143' '(at5g26742 : 884.0) embryo defective 1138 (emb1138); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), GUCT (InterPro:IPR012562), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, CCHC-type (InterPro:IPR001878), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: putative mitochondrial RNA helicase 2 (TAIR:AT3G22330.1). & (gnl|cdd|35552 : 398.0) no description available & (gnl|cdd|30859 : 367.0) no description available & (q41382|rh7_spiol : 341.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 1768.0) & (original description: Putative RH3, Description = DEAD-box ATP-dependent RNA helicase 3, chloroplastic, PFAM = PF08152;PF00098;PF00270;PF00271)' T '27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold3073_103282-118578' '(gnl|cdd|35552 : 355.0) no description available & (gnl|cdd|30859 : 342.0) no description available & (at1g55150 : 273.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 234.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 546.0) & (original description: Putative P68, Description = DEAD box protein P68, PFAM = PF00271;PF00270)' T '27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold4291_71586-75718' '(at2g33730 : 940.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G28180.1); Has 125674 Blast hits to 72393 proteins in 3317 species: Archae - 1039; Bacteria - 55089; Metazoa - 31149; Fungi - 11223; Plants - 5926; Viruses - 327; Other Eukaryotes - 20921 (source: NCBI BLink). & (gnl|cdd|35554 : 724.0) no description available & (gnl|cdd|30859 : 347.0) no description available & (p46942|db10_nicsy : 295.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1880.0) & (original description: Putative RH21, Description = DEAD-box ATP-dependent RNA helicase 21, PFAM = PF00270;PF00271)' T '27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold4712_110626-121295' '(at3g01410 : 158.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease H activity, nuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT1G24090.1); Has 3179 Blast hits to 3179 proteins in 588 species: Archae - 77; Bacteria - 1109; Metazoa - 13; Fungi - 0; Plants - 1505; Viruses - 0; Other Eukaryotes - 475 (source: NCBI BLink). & (gnl|cdd|82165 : 108.0) no description available & (reliability: 292.0) & (original description: Putative rnhA, Description = Ribonuclease H1, N-terminal, PFAM = PF13456)' T '27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold7880_42056-55974' '(at5g63630 : 805.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G08610.1); Has 41050 Blast hits to 40248 proteins in 2998 species: Archae - 715; Bacteria - 20319; Metazoa - 6002; Fungi - 4604; Plants - 2553; Viruses - 10; Other Eukaryotes - 6847 (source: NCBI BLink). & (gnl|cdd|35563 : 585.0) no description available & (gnl|cdd|30859 : 314.0) no description available & (p46942|db10_nicsy : 174.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1610.0) & (original description: Putative RH26, Description = DEAD-box ATP-dependent RNA helicase 26, PFAM = PF00270;PF00271)' T '27.1.2' 'RNA.processing.RNA helicase' 'nbv0.5scaffold10905_723-3113' '(gnl|cdd|28928 : 107.0) no description available & (gnl|cdd|35555 : 105.0) no description available & (at2g47330 : 94.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G20920.1); Has 46798 Blast hits to 46047 proteins in 3085 species: Archae - 817; Bacteria - 24489; Metazoa - 6167; Fungi - 4661; Plants - 2616; Viruses - 11; Other Eukaryotes - 8037 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative p62, Description = ATP-dependent RNA helicase p62, PFAM = PF00270)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben044scf00010695ctg006_4219-11724' '(at5g62190 : 728.0) DEAD/DEAH box RNA helicase PRH75; PRH75; FUNCTIONS IN: DEAD/H-box RNA helicase binding, ATP-dependent helicase activity; INVOLVED IN: RNA metabolic process; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), GUCT (InterPro:IPR012562), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) (TAIR:AT5G26742.2); Has 57587 Blast hits to 49572 proteins in 3210 species: Archae - 795; Bacteria - 24538; Metazoa - 10953; Fungi - 6002; Plants - 4052; Viruses - 90; Other Eukaryotes - 11157 (source: NCBI BLink). & (q41382|rh7_spiol : 720.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (gnl|cdd|35552 : 395.0) no description available & (gnl|cdd|30859 : 302.0) no description available & (reliability: 1456.0) & (original description: Putative RH7, Description = DEAD-box ATP-dependent RNA helicase 7, PFAM = PF00270;PF00271;PF08152)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben044scf00011757ctg022_16303-24843' '(p46942|db10_nicsy : 1052.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (at3g01540 : 740.0) RNA HELICASE DRH1; DEAD box RNA helicase 1 (DRH1); FUNCTIONS IN: ATPase activity, ATP-dependent RNA helicase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase family protein (TAIR:AT5G14610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35552 : 545.0) no description available & (gnl|cdd|30859 : 400.0) no description available & (reliability: 1480.0) & (original description: Putative dbp2, Description = DEAD-box ATP-dependent RNA helicase 40, PFAM = PF00271;PF00270)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben044scf00015643ctg002_8409-15571' '(p46942|db10_nicsy : 777.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (at5g14610 : 705.0) DEAD box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase 1 (TAIR:AT3G01540.4). & (gnl|cdd|35552 : 545.0) no description available & (gnl|cdd|30859 : 405.0) no description available & (reliability: 1410.0) & (original description: Putative RH46, Description = DEAD-box ATP-dependent RNA helicase 46, PFAM = PF00397;PF00271;PF00270)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben044scf00018410ctg005_2805-5834' '(at5g47010 : 84.0) Required for nonsense-mediated mRNA decay. Involved in RNA interference. lba1 mutants has reduced sugar-induced expression of Atb- amylase, is hypersensitive to glucose and abscisic acid and resistant to mannose, and shows early flowering, short day-sensitive growth, and seed germination phenotypes.; LOW-LEVEL BETA-AMYLASE 1 (LBA1); FUNCTIONS IN: in 6 functions; INVOLVED IN: sugar mediated signaling pathway, RNA interference, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, response to sucrose stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), RNA helicase UPF1, UPF2-interacting domain (InterPro:IPR018999); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1); Has 9640 Blast hits to 8330 proteins in 1330 species: Archae - 182; Bacteria - 2840; Metazoa - 3001; Fungi - 1369; Plants - 807; Viruses - 148; Other Eukaryotes - 1293 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative LBA1, Description = Regulator of nonsense transcripts 1-like protein, PFAM = )' T '27.1.2' 'RNA.processing.RNA helicase' 'niben044scf00018439ctg006_3663-10866' '(at3g62310 : 1274.0) RNA helicase family protein; FUNCTIONS IN: RNA helicase activity, helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT2G47250.1); Has 10517 Blast hits to 9531 proteins in 1639 species: Archae - 4; Bacteria - 3473; Metazoa - 2472; Fungi - 1291; Plants - 883; Viruses - 640; Other Eukaryotes - 1754 (source: NCBI BLink). & (gnl|cdd|36143 : 1175.0) no description available & (gnl|cdd|31829 : 668.0) no description available & (reliability: 2548.0) & (original description: Putative dhx15, Description = Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43, PFAM = PF13401;PF07717;PF04408;PF00271)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben044scf00021398ctg011_81-9180' '(at5g26742 : 898.0) embryo defective 1138 (emb1138); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), GUCT (InterPro:IPR012562), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, CCHC-type (InterPro:IPR001878), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: putative mitochondrial RNA helicase 2 (TAIR:AT3G22330.1). & (gnl|cdd|35552 : 397.0) no description available & (gnl|cdd|30859 : 369.0) no description available & (q41382|rh7_spiol : 341.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 1796.0) & (original description: Putative RH3, Description = DEAD-box ATP-dependent RNA helicase 3, chloroplastic, PFAM = PF00271;PF00270;PF08152;PF00098)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben044scf00027428ctg000_2446-6249' '(at2g33730 : 937.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G28180.1); Has 125674 Blast hits to 72393 proteins in 3317 species: Archae - 1039; Bacteria - 55089; Metazoa - 31149; Fungi - 11223; Plants - 5926; Viruses - 327; Other Eukaryotes - 20921 (source: NCBI BLink). & (gnl|cdd|35554 : 722.0) no description available & (gnl|cdd|30859 : 345.0) no description available & (p46942|db10_nicsy : 292.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1874.0) & (original description: Putative RH21, Description = DEAD-box ATP-dependent RNA helicase 21, PFAM = PF00270;PF00271)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben044scf00029160ctg000_4958-10430' '(at3g06480 : 647.0) DEAD box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase 1 (TAIR:AT3G01540.4); Has 132761 Blast hits to 82344 proteins in 3707 species: Archae - 865; Bacteria - 47475; Metazoa - 37917; Fungi - 12444; Plants - 11781; Viruses - 886; Other Eukaryotes - 21393 (source: NCBI BLink). & (p46942|db10_nicsy : 601.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|35552 : 519.0) no description available & (gnl|cdd|30859 : 403.0) no description available & (reliability: 1294.0) & (original description: Putative ddx5, Description = DEAD-box ATP-dependent RNA helicase 40, PFAM = PF00271;PF00270)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf00138_289079-293693' '(gnl|cdd|36141 : 674.0) no description available & (at1g32490 : 627.0) Encodes a homolog of the yeast PRP2 protein, one of four related DEAH RNA helicases identified as essential cofactors for RNA splicing.; ENHANCED SILENCING PHENOTYPE 3 (ESP3); FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: RNA splicing, posttranscriptional gene silencing by RNA, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: helicase domain-containing protein (TAIR:AT2G35340.1). & (gnl|cdd|31829 : 356.0) no description available & (reliability: 1254.0) & (original description: Putative cdc28, Description = Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, PFAM = PF00271;PF07717;PF04408)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf00200_95824-111297' '(at5g13010 : 1622.0) embryo defective 3011 (EMB3011); FUNCTIONS IN: RNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36142 : 1295.0) no description available & (gnl|cdd|31829 : 650.0) no description available & (reliability: 3244.0) & (original description: Putative CUV, Description = Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7, PFAM = PF00271;PF07717;PF00270;PF04408)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf00218_64384-71005' '(at5g47010 : 169.0) Required for nonsense-mediated mRNA decay. Involved in RNA interference. lba1 mutants has reduced sugar-induced expression of Atb- amylase, is hypersensitive to glucose and abscisic acid and resistant to mannose, and shows early flowering, short day-sensitive growth, and seed germination phenotypes.; LOW-LEVEL BETA-AMYLASE 1 (LBA1); FUNCTIONS IN: in 6 functions; INVOLVED IN: sugar mediated signaling pathway, RNA interference, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, response to sucrose stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), RNA helicase UPF1, UPF2-interacting domain (InterPro:IPR018999); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1); Has 9640 Blast hits to 8330 proteins in 1330 species: Archae - 182; Bacteria - 2840; Metazoa - 3001; Fungi - 1369; Plants - 807; Viruses - 148; Other Eukaryotes - 1293 (source: NCBI BLink). & (gnl|cdd|37013 : 90.1) no description available & (gnl|cdd|87961 : 81.9) no description available & (reliability: 338.0) & (original description: Putative 650, Description = Regulator of nonsense transcripts 1, PFAM = PF09416)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf00793_101031-107655' '(at3g62310 : 1298.0) RNA helicase family protein; FUNCTIONS IN: RNA helicase activity, helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT2G47250.1); Has 10517 Blast hits to 9531 proteins in 1639 species: Archae - 4; Bacteria - 3473; Metazoa - 2472; Fungi - 1291; Plants - 883; Viruses - 640; Other Eukaryotes - 1754 (source: NCBI BLink). & (gnl|cdd|36143 : 1177.0) no description available & (gnl|cdd|31829 : 668.0) no description available & (reliability: 2596.0) & (original description: Putative dhx15, Description = Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43, PFAM = PF00271;PF04408;PF07717;PF13401)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf01085_589105-604270' '(gnl|cdd|35552 : 401.0) no description available & (gnl|cdd|30859 : 384.0) no description available & (at1g55150 : 288.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 254.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 576.0) & (original description: Putative rhlE, Description = ATP-dependent RNA helicase RhlE, PFAM = PF00271;PF00270)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf01740_1812242-1817974' '(at3g58570 : 572.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G42520.1); Has 86488 Blast hits to 59724 proteins in 3531 species: Archae - 886; Bacteria - 35070; Metazoa - 23291; Fungi - 6787; Plants - 8100; Viruses - 385; Other Eukaryotes - 11969 (source: NCBI BLink). & (gnl|cdd|35556 : 534.0) no description available & (gnl|cdd|30859 : 381.0) no description available & (p46942|db10_nicsy : 316.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1144.0) & (original description: Putative an3, Description = DEAD-box ATP-dependent RNA helicase 37, PFAM = PF00271;PF00270)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf02033_343568-349805' '(q41382|rh7_spiol : 732.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (at5g62190 : 727.0) DEAD/DEAH box RNA helicase PRH75; PRH75; FUNCTIONS IN: DEAD/H-box RNA helicase binding, ATP-dependent helicase activity; INVOLVED IN: RNA metabolic process; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), GUCT (InterPro:IPR012562), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) (TAIR:AT5G26742.2); Has 57587 Blast hits to 49572 proteins in 3210 species: Archae - 795; Bacteria - 24538; Metazoa - 10953; Fungi - 6002; Plants - 4052; Viruses - 90; Other Eukaryotes - 11157 (source: NCBI BLink). & (gnl|cdd|35552 : 397.0) no description available & (gnl|cdd|30859 : 296.0) no description available & (reliability: 1454.0) & (original description: Putative RH7, Description = DEAD-box ATP-dependent RNA helicase 7, PFAM = PF00270;PF00271;PF08152)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf02072_186765-194520' '(at2g42520 : 749.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G58510.3); Has 140248 Blast hits to 67514 proteins in 3679 species: Archae - 1004; Bacteria - 58923; Metazoa - 37605; Fungi - 9665; Plants - 13202; Viruses - 1099; Other Eukaryotes - 18750 (source: NCBI BLink). & (gnl|cdd|35556 : 607.0) no description available & (gnl|cdd|30859 : 391.0) no description available & (p46942|db10_nicsy : 319.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1498.0) & (original description: Putative RH37, Description = DEAD-box ATP-dependent RNA helicase 37, PFAM = PF00271;PF00270)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf02420_668888-676566' '(at5g62190 : 723.0) DEAD/DEAH box RNA helicase PRH75; PRH75; FUNCTIONS IN: DEAD/H-box RNA helicase binding, ATP-dependent helicase activity; INVOLVED IN: RNA metabolic process; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), GUCT (InterPro:IPR012562), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) (TAIR:AT5G26742.2); Has 57587 Blast hits to 49572 proteins in 3210 species: Archae - 795; Bacteria - 24538; Metazoa - 10953; Fungi - 6002; Plants - 4052; Viruses - 90; Other Eukaryotes - 11157 (source: NCBI BLink). & (q41382|rh7_spiol : 720.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (gnl|cdd|35552 : 396.0) no description available & (gnl|cdd|30859 : 298.0) no description available & (reliability: 1446.0) & (original description: Putative RH7, Description = DEAD-box ATP-dependent RNA helicase 7, PFAM = PF08152;PF00271;PF00270)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf02589_67767-74198' '(at3g06480 : 158.0) DEAD box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase 1 (TAIR:AT3G01540.4); Has 132761 Blast hits to 82344 proteins in 3707 species: Archae - 865; Bacteria - 47475; Metazoa - 37917; Fungi - 12444; Plants - 11781; Viruses - 886; Other Eukaryotes - 21393 (source: NCBI BLink). & (p46942|db10_nicsy : 82.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 316.0) & (original description: Putative DBP2, Description = DEAD-box ATP-dependent RNA helicase 40, PFAM = PF00397)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf02762_275203-287327' '(at5g26742 : 884.0) embryo defective 1138 (emb1138); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), GUCT (InterPro:IPR012562), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, CCHC-type (InterPro:IPR001878), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: putative mitochondrial RNA helicase 2 (TAIR:AT3G22330.1). & (gnl|cdd|35552 : 399.0) no description available & (gnl|cdd|30859 : 367.0) no description available & (q41382|rh7_spiol : 341.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 1768.0) & (original description: Putative RH3, Description = DEAD-box ATP-dependent RNA helicase 3, chloroplastic, PFAM = PF00270;PF08152;PF00098;PF00271)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf03031_510658-522013' '(at1g05460 : 1055.0) Encodes a protein with similarity to RNA helicases. Mutants are defective in post-transcriptional gene silencing.; SILENCING DEFECTIVE (SDE3); FUNCTIONS IN: RNA helicase activity; INVOLVED IN: virus induced gene silencing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DNA helicase, UvrD/REP type (InterPro:IPR000212); BEST Arabidopsis thaliana protein match is: RNA helicase, putative (TAIR:AT5G47010.1); Has 8827 Blast hits to 7137 proteins in 1206 species: Archae - 219; Bacteria - 2402; Metazoa - 1784; Fungi - 1431; Plants - 666; Viruses - 219; Other Eukaryotes - 2106 (source: NCBI BLink). & (gnl|cdd|37015 : 445.0) no description available & (gnl|cdd|31309 : 191.0) no description available & (reliability: 2110.0) & (original description: Putative SDE3, Description = Probable RNA helicase SDE3, PFAM = PF13086;PF13086;PF13087)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf03049_783383-792617' '(at3g06480 : 723.0) DEAD box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase 1 (TAIR:AT3G01540.4); Has 132761 Blast hits to 82344 proteins in 3707 species: Archae - 865; Bacteria - 47475; Metazoa - 37917; Fungi - 12444; Plants - 11781; Viruses - 886; Other Eukaryotes - 21393 (source: NCBI BLink). & (p46942|db10_nicsy : 601.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|35552 : 543.0) no description available & (gnl|cdd|30859 : 424.0) no description available & (reliability: 1446.0) & (original description: Putative dbp2, Description = DEAD-box ATP-dependent RNA helicase 40, PFAM = PF00397;PF00270;PF00271)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf03052_19884-52340' '(at4g18465 : 1048.0) RNA helicase family protein; FUNCTIONS IN: RNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G32490.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36140 : 851.0) no description available & (gnl|cdd|31829 : 590.0) no description available & (reliability: 2096.0) & (original description: Putative dhx8, Description = Putative ATP-dependent RNA helicase DHX35, PFAM = PF00271;PF04408;PF07717)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf03436_20348-44280' '(at1g63250 : 840.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G07750.1); Has 39480 Blast hits to 38845 proteins in 2963 species: Archae - 566; Bacteria - 19506; Metazoa - 5817; Fungi - 4606; Plants - 2531; Viruses - 8; Other Eukaryotes - 6446 (source: NCBI BLink). & (gnl|cdd|35563 : 539.0) no description available & (gnl|cdd|30859 : 301.0) no description available & (p41380|if4a3_nicpl : 157.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1680.0) & (original description: Putative Os06g0526600, Description = DEAD-box ATP-dependent RNA helicase 31, PFAM = PF00270;PF00271;PF03080)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf03703_329972-337794' '(at3g22330 : 605.0) DEAD-box protein required for efficient group II intron splicing in mitochondria.; putative mitochondrial RNA helicase 2 (PMH2); FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cold, Group II intron splicing; LOCATED IN: mitochondrion, nucleolus, cell wall, protein complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) (TAIR:AT5G26742.2); Has 113280 Blast hits to 72794 proteins in 3598 species: Archae - 1390; Bacteria - 52148; Metazoa - 22767; Fungi - 9352; Plants - 8202; Viruses - 661; Other Eukaryotes - 18760 (source: NCBI BLink). & (gnl|cdd|35552 : 420.0) no description available & (gnl|cdd|30859 : 374.0) no description available & (q41382|rh7_spiol : 317.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 1210.0) & (original description: Putative ddx21, Description = DEAD-box ATP-dependent RNA helicase 53, PFAM = PF00271;PF00270)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf03952_114459-130073' '(at5g63630 : 806.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G08610.1); Has 41050 Blast hits to 40248 proteins in 2998 species: Archae - 715; Bacteria - 20319; Metazoa - 6002; Fungi - 4604; Plants - 2553; Viruses - 10; Other Eukaryotes - 6847 (source: NCBI BLink). & (gnl|cdd|35563 : 588.0) no description available & (gnl|cdd|30859 : 315.0) no description available & (p46942|db10_nicsy : 172.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1612.0) & (original description: Putative RH26, Description = DEAD-box ATP-dependent RNA helicase 26, PFAM = PF00271;PF00270)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf04403_33373-46726' '(at1g26370 : 956.0) RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), ATPase, AAA+ type, core (InterPro:IPR003593), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 9899 Blast hits to 9180 proteins in 1561 species: Archae - 2; Bacteria - 3369; Metazoa - 2309; Fungi - 1230; Plants - 848; Viruses - 465; Other Eukaryotes - 1676 (source: NCBI BLink). & (gnl|cdd|36140 : 825.0) no description available & (gnl|cdd|31829 : 615.0) no description available & (reliability: 1912.0) & (original description: Putative RID1, Description = Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10, PFAM = PF07717;PF04408;PF00271)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf04403_33382-47713' '(gnl|cdd|36142 : 565.0) no description available & (at1g26370 : 504.0) RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), ATPase, AAA+ type, core (InterPro:IPR003593), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 9899 Blast hits to 9180 proteins in 1561 species: Archae - 2; Bacteria - 3369; Metazoa - 2309; Fungi - 1230; Plants - 848; Viruses - 465; Other Eukaryotes - 1676 (source: NCBI BLink). & (gnl|cdd|31829 : 440.0) no description available & (reliability: 1008.0) & (original description: Putative splh1, Description = DEAH-box nuclear pre-mRNA splicing factor, PFAM = PF00271;PF07717;PF04408)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf04410_946884-1029148' '(at5g61140 : 3322.0) Encodes a predicted protein with 30% identity with MER3/RCK.; U5 small nuclear ribonucleoprotein helicase; FUNCTIONS IN: in 6 functions; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase, putative (TAIR:AT1G20960.2). & (gnl|cdd|36170 : 1379.0) no description available & (gnl|cdd|31397 : 538.0) no description available & (reliability: 6644.0) & (original description: Putative BRR2C, Description = DExH-box ATP-dependent RNA helicase DExH14, PFAM = PF00271;PF00271;PF00270;PF00270;PF02889;PF02889)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf04410_1008095-1011357' '(at5g61140 : 291.0) Encodes a predicted protein with 30% identity with MER3/RCK.; U5 small nuclear ribonucleoprotein helicase; FUNCTIONS IN: in 6 functions; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase, putative (TAIR:AT1G20960.2). & (gnl|cdd|47902 : 156.0) no description available & (reliability: 582.0) & (original description: Putative ascc3, Description = Activating signal cointegrator 1 complex subunit 3, PFAM = PF02889)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf04506_225885-240538' '(at1g27900 : 1031.0) RNA helicase family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 10760 Blast hits to 9882 proteins in 1732 species: Archae - 26; Bacteria - 3503; Metazoa - 2392; Fungi - 1270; Plants - 841; Viruses - 1056; Other Eukaryotes - 1672 (source: NCBI BLink). & (gnl|cdd|36140 : 749.0) no description available & (gnl|cdd|31829 : 583.0) no description available & (reliability: 2062.0) & (original description: Putative dhx8, Description = ATP-dependent RNA helicase DHX8, PFAM = PF00270;PF07717;PF00271;PF04408)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf04633_6476-15287' '(p46942|db10_nicsy : 1094.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (at3g01540 : 744.0) RNA HELICASE DRH1; DEAD box RNA helicase 1 (DRH1); FUNCTIONS IN: ATPase activity, ATP-dependent RNA helicase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase family protein (TAIR:AT5G14610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35552 : 543.0) no description available & (gnl|cdd|30859 : 402.0) no description available & (reliability: 1488.0) & (original description: Putative dbp2, Description = DEAD-box ATP-dependent RNA helicase 40, PFAM = PF00270;PF00271)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf05056_56263-59915' '(at1g12770 : 649.0) Encodes a DEAD-box RNA helicase that localizes to mitochondria and is essential for regulating cell-to-cell transport via plasmodesmata.; embryo defective 1586 (EMB1586); FUNCTIONS IN: RNA helicase activity; INVOLVED IN: plasmodesma organization, plasmodesmata-mediated intercellular transport, embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: embryo, root, flower, shoot meristem; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 38833 Blast hits to 38121 proteins in 2993 species: Archae - 753; Bacteria - 18819; Metazoa - 5837; Fungi - 4441; Plants - 2445; Viruses - 12; Other Eukaryotes - 6526 (source: NCBI BLink). & (gnl|cdd|35548 : 286.0) no description available & (gnl|cdd|30859 : 266.0) no description available & (p46942|db10_nicsy : 147.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1298.0) & (original description: Putative RH47, Description = DEAD-box ATP-dependent RNA helicase 47, mitochondrial, PFAM = PF00270;PF00271)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf05447_188097-211203' '(at2g42520 : 778.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G58510.3); Has 140248 Blast hits to 67514 proteins in 3679 species: Archae - 1004; Bacteria - 58923; Metazoa - 37605; Fungi - 9665; Plants - 13202; Viruses - 1099; Other Eukaryotes - 18750 (source: NCBI BLink). & (gnl|cdd|35556 : 593.0) no description available & (gnl|cdd|30859 : 394.0) no description available & (p46942|db10_nicsy : 316.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1556.0) & (original description: Putative RH37, Description = DEAD-box ATP-dependent RNA helicase 37, PFAM = PF00271;PF00270)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf05523_129901-136800' '(p46942|db10_nicsy : 368.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (at3g01540 : 312.0) RNA HELICASE DRH1; DEAD box RNA helicase 1 (DRH1); FUNCTIONS IN: ATPase activity, ATP-dependent RNA helicase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase family protein (TAIR:AT5G14610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35552 : 247.0) no description available & (gnl|cdd|30859 : 173.0) no description available & (reliability: 624.0) & (original description: Putative dbp2, Description = DEAD-box ATP-dependent RNA helicase 40, PFAM = PF00270;PF00271)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf05711_72775-79746' '(at2g42520 : 768.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G58510.3); Has 140248 Blast hits to 67514 proteins in 3679 species: Archae - 1004; Bacteria - 58923; Metazoa - 37605; Fungi - 9665; Plants - 13202; Viruses - 1099; Other Eukaryotes - 18750 (source: NCBI BLink). & (gnl|cdd|35556 : 591.0) no description available & (gnl|cdd|30859 : 395.0) no description available & (p46942|db10_nicsy : 317.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1536.0) & (original description: Putative PL10B, Description = DEAD-box ATP-dependent RNA helicase 52B, PFAM = PF00270;PF00271)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf06008_1-4775' '(at5g08020 : 847.0) Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair.; RPA70-kDa subunit B (RPA70B); FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: DNA repair, response to UV-B, DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Replication factor-a protein 1 Rpa1 (InterPro:IPR004591), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication factor A, C-terminal (InterPro:IPR013955), Replication factor-A protein 1, N-terminal (InterPro:IPR007199); BEST Arabidopsis thaliana protein match is: Replication factor-A protein 1-related (TAIR:AT5G61000.1); Has 1056 Blast hits to 1045 proteins in 226 species: Archae - 10; Bacteria - 0; Metazoa - 213; Fungi - 147; Plants - 535; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|72071 : 172.0) no description available & (reliability: 1608.0) & (original description: Putative RPA1B, Description = Replication protein A 70 kDa DNA-binding subunit B, PFAM = PF04057;PF16900;PF08646;PF01336)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf06190_198485-202767' '(at5g51280 : 990.0) DEAD-box protein abstrakt, putative; FUNCTIONS IN: helicase activity, zinc ion binding, ATP-dependent helicase activity, nucleic acid binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, CCHC-type (InterPro:IPR001878), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT4G33370.1); Has 46358 Blast hits to 45535 proteins in 3129 species: Archae - 906; Bacteria - 23651; Metazoa - 6388; Fungi - 4930; Plants - 2690; Viruses - 10; Other Eukaryotes - 7783 (source: NCBI BLink). & (gnl|cdd|35562 : 942.0) no description available & (gnl|cdd|30859 : 346.0) no description available & (p46942|db10_nicsy : 280.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1980.0) & (original description: Putative RH35, Description = DEAD-box ATP-dependent RNA helicase 35, PFAM = PF00098;PF00271;PF00270)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf06412_536377-541856' '(at3g62310 : 898.0) RNA helicase family protein; FUNCTIONS IN: RNA helicase activity, helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT2G47250.1); Has 10517 Blast hits to 9531 proteins in 1639 species: Archae - 4; Bacteria - 3473; Metazoa - 2472; Fungi - 1291; Plants - 883; Viruses - 640; Other Eukaryotes - 1754 (source: NCBI BLink). & (gnl|cdd|36143 : 814.0) no description available & (gnl|cdd|31829 : 591.0) no description available & (reliability: 1796.0) & (original description: Putative PRP43, Description = Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43, PFAM = PF13401;PF00271;PF04408)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf06442_49733-57319' '(p46942|db10_nicsy : 452.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (at5g14610 : 449.0) DEAD box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase 1 (TAIR:AT3G01540.4). & (gnl|cdd|35552 : 412.0) no description available & (gnl|cdd|30859 : 296.0) no description available & (reliability: 898.0) & (original description: Putative DBP2, Description = DEAD-box ATP-dependent RNA helicase 40, PFAM = PF00397;PF00270;PF00271)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf06884_9417-15923' '(q41382|rh7_spiol : 717.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (at5g62190 : 714.0) DEAD/DEAH box RNA helicase PRH75; PRH75; FUNCTIONS IN: DEAD/H-box RNA helicase binding, ATP-dependent helicase activity; INVOLVED IN: RNA metabolic process; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), GUCT (InterPro:IPR012562), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) (TAIR:AT5G26742.2); Has 57587 Blast hits to 49572 proteins in 3210 species: Archae - 795; Bacteria - 24538; Metazoa - 10953; Fungi - 6002; Plants - 4052; Viruses - 90; Other Eukaryotes - 11157 (source: NCBI BLink). & (gnl|cdd|35552 : 394.0) no description available & (gnl|cdd|30859 : 295.0) no description available & (reliability: 1428.0) & (original description: Putative RH7, Description = DEAD-box ATP-dependent RNA helicase 7, PFAM = PF00271;PF00270;PF08152)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf07253_1-2885' '(at2g33730 : 947.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G28180.1); Has 125674 Blast hits to 72393 proteins in 3317 species: Archae - 1039; Bacteria - 55089; Metazoa - 31149; Fungi - 11223; Plants - 5926; Viruses - 327; Other Eukaryotes - 20921 (source: NCBI BLink). & (gnl|cdd|35554 : 722.0) no description available & (gnl|cdd|30859 : 352.0) no description available & (p46942|db10_nicsy : 295.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1894.0) & (original description: Putative RH21, Description = DEAD-box ATP-dependent RNA helicase 21, PFAM = PF00270;PF00271)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf07833_71432-80829' '(at3g22330 : 566.0) DEAD-box protein required for efficient group II intron splicing in mitochondria.; putative mitochondrial RNA helicase 2 (PMH2); FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cold, Group II intron splicing; LOCATED IN: mitochondrion, nucleolus, cell wall, protein complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) (TAIR:AT5G26742.2); Has 113280 Blast hits to 72794 proteins in 3598 species: Archae - 1390; Bacteria - 52148; Metazoa - 22767; Fungi - 9352; Plants - 8202; Viruses - 661; Other Eukaryotes - 18760 (source: NCBI BLink). & (gnl|cdd|35552 : 422.0) no description available & (gnl|cdd|30859 : 374.0) no description available & (q41382|rh7_spiol : 306.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 1132.0) & (original description: Putative ddx21, Description = DEAD-box ATP-dependent RNA helicase 53, PFAM = PF00270;PF00271)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf07833_72066-114704' '(at3g22330 : 469.0) DEAD-box protein required for efficient group II intron splicing in mitochondria.; putative mitochondrial RNA helicase 2 (PMH2); FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cold, Group II intron splicing; LOCATED IN: mitochondrion, nucleolus, cell wall, protein complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) (TAIR:AT5G26742.2); Has 113280 Blast hits to 72794 proteins in 3598 species: Archae - 1390; Bacteria - 52148; Metazoa - 22767; Fungi - 9352; Plants - 8202; Viruses - 661; Other Eukaryotes - 18760 (source: NCBI BLink). & (gnl|cdd|35552 : 345.0) no description available & (gnl|cdd|30859 : 302.0) no description available & (q41382|rh7_spiol : 257.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 938.0) & (original description: Putative ddx21, Description = DEAD-box ATP-dependent RNA helicase 53, PFAM = PF00270;PF00271)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf08679_361516-371378' '(at2g42520 : 773.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G58510.3); Has 140248 Blast hits to 67514 proteins in 3679 species: Archae - 1004; Bacteria - 58923; Metazoa - 37605; Fungi - 9665; Plants - 13202; Viruses - 1099; Other Eukaryotes - 18750 (source: NCBI BLink). & (gnl|cdd|35556 : 604.0) no description available & (gnl|cdd|30859 : 387.0) no description available & (p46942|db10_nicsy : 323.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1546.0) & (original description: Putative RH37, Description = DEAD-box ATP-dependent RNA helicase 37, PFAM = PF00271;PF00270)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf08873_215945-223948' '(at5g63120 : 685.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G55150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35552 : 581.0) no description available & (p46942|db10_nicsy : 421.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|30859 : 401.0) no description available & (reliability: 1264.0) & (original description: Putative RH20, Description = DEAD-box ATP-dependent RNA helicase 20, PFAM = PF00270;PF00271)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf09284_190948-210674' '(at5g47010 : 1942.0) Required for nonsense-mediated mRNA decay. Involved in RNA interference. lba1 mutants has reduced sugar-induced expression of Atb- amylase, is hypersensitive to glucose and abscisic acid and resistant to mannose, and shows early flowering, short day-sensitive growth, and seed germination phenotypes.; LOW-LEVEL BETA-AMYLASE 1 (LBA1); FUNCTIONS IN: in 6 functions; INVOLVED IN: sugar mediated signaling pathway, RNA interference, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, response to sucrose stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), RNA helicase UPF1, UPF2-interacting domain (InterPro:IPR018999); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1); Has 9640 Blast hits to 8330 proteins in 1330 species: Archae - 182; Bacteria - 2840; Metazoa - 3001; Fungi - 1369; Plants - 807; Viruses - 148; Other Eukaryotes - 1293 (source: NCBI BLink). & (gnl|cdd|37013 : 1363.0) no description available & (gnl|cdd|31309 : 359.0) no description available & (reliability: 3884.0) & (original description: Putative UPF1, Description = Regulator of nonsense transcripts 1 homolog, PFAM = PF04851;PF09416;PF13087;PF13086)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf10336_356621-365688' '(at1g24090 : 300.0) RNase H family protein; FUNCTIONS IN: ribonuclease H activity, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT5G51080.2); Has 3412 Blast hits to 3412 proteins in 738 species: Archae - 71; Bacteria - 1533; Metazoa - 7; Fungi - 2; Plants - 1270; Viruses - 0; Other Eukaryotes - 529 (source: NCBI BLink). & (gnl|cdd|82165 : 115.0) no description available & (reliability: 550.0) & (original description: Putative rnhA, Description = RNase H domain-containing protein, PFAM = PF13456)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf11806_42157-79839' '(at1g32490 : 1480.0) Encodes a homolog of the yeast PRP2 protein, one of four related DEAH RNA helicases identified as essential cofactors for RNA splicing.; ENHANCED SILENCING PHENOTYPE 3 (ESP3); FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: RNA splicing, posttranscriptional gene silencing by RNA, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: helicase domain-containing protein (TAIR:AT2G35340.1). & (gnl|cdd|36141 : 1326.0) no description available & (gnl|cdd|31829 : 679.0) no description available & (reliability: 2960.0) & (original description: Putative ESP3, Description = Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1, PFAM = PF04408;PF07717;PF00271)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf12372_99803-105228' '(at1g20920 : 1058.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G09620.1); Has 45185 Blast hits to 44279 proteins in 3076 species: Archae - 794; Bacteria - 22443; Metazoa - 6674; Fungi - 4936; Plants - 2699; Viruses - 11; Other Eukaryotes - 7628 (source: NCBI BLink). & (gnl|cdd|35555 : 867.0) no description available & (gnl|cdd|30859 : 337.0) no description available & (p46942|db10_nicsy : 310.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 2116.0) & (original description: Putative prp5, Description = Putative ATP-dependent RNA helicase DDX46, PFAM = PF00270;PF00271)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf13411_434133-441934' '(at3g22330 : 605.0) DEAD-box protein required for efficient group II intron splicing in mitochondria.; putative mitochondrial RNA helicase 2 (PMH2); FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cold, Group II intron splicing; LOCATED IN: mitochondrion, nucleolus, cell wall, protein complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) (TAIR:AT5G26742.2); Has 113280 Blast hits to 72794 proteins in 3598 species: Archae - 1390; Bacteria - 52148; Metazoa - 22767; Fungi - 9352; Plants - 8202; Viruses - 661; Other Eukaryotes - 18760 (source: NCBI BLink). & (gnl|cdd|35552 : 427.0) no description available & (gnl|cdd|30859 : 379.0) no description available & (q41382|rh7_spiol : 317.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 1210.0) & (original description: Putative ddx21, Description = DEAD-box ATP-dependent RNA helicase 53, PFAM = PF00271;PF00270)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf15419_157029-164865' '(at1g55150 : 734.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (gnl|cdd|35552 : 593.0) no description available & (p46942|db10_nicsy : 433.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|30859 : 394.0) no description available & (reliability: 1468.0) & (original description: Putative dbp2, Description = ATP-dependent RNA helicase DBP2, PFAM = PF00270;PF00271)' T '27.1.2' 'RNA.processing.RNA helicase' 'niben101scf33352_12075-38896' '(at1g55150 : 763.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (gnl|cdd|35552 : 597.0) no description available & (p46942|db10_nicsy : 439.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|30859 : 394.0) no description available & (reliability: 1526.0) & (original description: Putative RH20, Description = DEAD-box ATP-dependent RNA helicase 20, PFAM = PF00271;PF00270)' T '27.1.3' 'RNA.processing.3' end processing' '' '' '27.1.3.1' 'RNA.processing.3' end processing.PAP' 'nbv0.3scaffold25254_6042-15212' '(at4g32850 : 793.0) Encodes a nuclear poly(A) polymerase. Located in the nucleus.; nuclear poly(a) polymerase (nPAP); CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyl transferase domain (InterPro:IPR002934), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37456 : 660.0) no description available & (gnl|cdd|80088 : 545.0) no description available & (reliability: 1586.0) & (original description: Putative hrg, Description = Poly(A) polymerase, PFAM = PF01909;PF04926;PF04928)' T '27.1.3.1' 'RNA.processing.3' end processing.PAP' 'nbv0.5scaffold773_584267-594005' '(at2g25850 : 852.0) Encodes a poly(A) polymerase. Located in the nucleus.; poly(A) polymerase 2 (PAPS2); CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Nucleotidyl transferase domain (InterPro:IPR002934), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); BEST Arabidopsis thaliana protein match is: nuclear poly(a) polymerase (TAIR:AT4G32850.9). & (gnl|cdd|37456 : 712.0) no description available & (gnl|cdd|80088 : 565.0) no description available & (reliability: 1704.0) & (original description: Putative PAPS2, Description = Nuclear poly(A) polymerase 2, PFAM = PF01909;PF04928;PF04926)' T '27.1.3.1' 'RNA.processing.3' end processing.PAP' 'nbv0.5scaffold1254_170833-185641' '(at4g32850 : 805.0) Encodes a nuclear poly(A) polymerase. Located in the nucleus.; nuclear poly(a) polymerase (nPAP); CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyl transferase domain (InterPro:IPR002934), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37456 : 671.0) no description available & (gnl|cdd|80088 : 548.0) no description available & (reliability: 1610.0) & (original description: Putative hrg, Description = Poly(A) polymerase, PFAM = PF04928;PF01909;PF04926;PF04926)' T '27.1.3.1' 'RNA.processing.3' end processing.PAP' 'niben044scf00000087ctg004_5045-10494' '(at3g06560 : 537.0) Encodes a poly(A) polymerase. Located in the cytoplasm.; poly(A) polymerase 3 (PAPS3); FUNCTIONS IN: protein binding, polynucleotide adenylyltransferase activity; INVOLVED IN: RNA 3'-end processing, RNA polyadenylation, transcription; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); BEST Arabidopsis thaliana protein match is: nuclear poly(a) polymerase (TAIR:AT4G32850.6); Has 776 Blast hits to 768 proteins in 219 species: Archae - 0; Bacteria - 13; Metazoa - 255; Fungi - 210; Plants - 173; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|37456 : 432.0) no description available & (gnl|cdd|80088 : 348.0) no description available & (reliability: 1074.0) & (original description: Putative PAPS3, Description = Nuclear poly(A) polymerase 3, PFAM = PF04928;PF01909)' T '27.1.3.1' 'RNA.processing.3' end processing.PAP' 'niben044scf00002688ctg014_1869-6154' '(at4g32850 : 682.0) Encodes a nuclear poly(A) polymerase. Located in the nucleus.; nuclear poly(a) polymerase (nPAP); CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyl transferase domain (InterPro:IPR002934), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37456 : 568.0) no description available & (gnl|cdd|80088 : 441.0) no description available & (reliability: 1364.0) & (original description: Putative hrg, Description = Poly(A) polymerase, PFAM = PF04928;PF04926)' T '27.1.3.1' 'RNA.processing.3' end processing.PAP' 'niben044scf00041648ctg002_1-2936' '(at4g32850 : 136.0) Encodes a nuclear poly(A) polymerase. Located in the nucleus.; nuclear poly(a) polymerase (nPAP); CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyl transferase domain (InterPro:IPR002934), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37456 : 127.0) no description available & (gnl|cdd|80088 : 120.0) no description available & (reliability: 272.0) & (original description: Putative nPAP, Description = Poly(A) polymerase, PFAM = PF04928)' T '27.1.3.1' 'RNA.processing.3' end processing.PAP' 'niben101scf00745_171923-188864' '(at4g32850 : 862.0) Encodes a nuclear poly(A) polymerase. Located in the nucleus.; nuclear poly(a) polymerase (nPAP); CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyl transferase domain (InterPro:IPR002934), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37456 : 723.0) no description available & (gnl|cdd|80088 : 569.0) no description available & (reliability: 1724.0) & (original description: Putative PAPS2, Description = Nuclear poly(A) polymerase 2, PFAM = PF04928;PF01909;PF04926;PF04926)' T '27.1.3.1' 'RNA.processing.3' end processing.PAP' 'niben101scf01022_50180-58253' '(at3g06560 : 561.0) Encodes a poly(A) polymerase. Located in the cytoplasm.; poly(A) polymerase 3 (PAPS3); FUNCTIONS IN: protein binding, polynucleotide adenylyltransferase activity; INVOLVED IN: RNA 3'-end processing, RNA polyadenylation, transcription; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); BEST Arabidopsis thaliana protein match is: nuclear poly(a) polymerase (TAIR:AT4G32850.6); Has 776 Blast hits to 768 proteins in 219 species: Archae - 0; Bacteria - 13; Metazoa - 255; Fungi - 210; Plants - 173; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|37456 : 460.0) no description available & (gnl|cdd|80088 : 379.0) no description available & (reliability: 1122.0) & (original description: Putative PAPS3, Description = Nuclear poly(A) polymerase 3, PFAM = PF04928)' T '27.1.3.1' 'RNA.processing.3' end processing.PAP' 'niben101scf01539_340810-348750' '(at4g32850 : 813.0) Encodes a nuclear poly(A) polymerase. Located in the nucleus.; nuclear poly(a) polymerase (nPAP); CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyl transferase domain (InterPro:IPR002934), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37456 : 691.0) no description available & (gnl|cdd|80088 : 555.0) no description available & (reliability: 1626.0) & (original description: Putative nPAP, Description = Poly(A) polymerase, PFAM = PF04928;PF04926;PF01909)' T '27.1.3.1' 'RNA.processing.3' end processing.PAP' 'niben101scf02111_1838410-1845412' '(at3g06560 : 531.0) Encodes a poly(A) polymerase. Located in the cytoplasm.; poly(A) polymerase 3 (PAPS3); FUNCTIONS IN: protein binding, polynucleotide adenylyltransferase activity; INVOLVED IN: RNA 3'-end processing, RNA polyadenylation, transcription; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); BEST Arabidopsis thaliana protein match is: nuclear poly(a) polymerase (TAIR:AT4G32850.6); Has 776 Blast hits to 768 proteins in 219 species: Archae - 0; Bacteria - 13; Metazoa - 255; Fungi - 210; Plants - 173; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|37456 : 406.0) no description available & (gnl|cdd|80088 : 321.0) no description available & (reliability: 1062.0) & (original description: Putative PAPS3, Description = Nucleotidyltransferase, class I, C-terminal-like protein, PFAM = PF04928;PF04928)' T '27.1.3.1' 'RNA.processing.3' end processing.PAP' 'niben101scf02217_497925-507095' '(at4g32850 : 856.0) Encodes a nuclear poly(A) polymerase. Located in the nucleus.; nuclear poly(a) polymerase (nPAP); CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyl transferase domain (InterPro:IPR002934), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37456 : 713.0) no description available & (gnl|cdd|80088 : 566.0) no description available & (reliability: 1712.0) & (original description: Putative PAP, Description = Poly(A) polymerase, PFAM = PF04928;PF04926;PF01909)' T '27.1.3.1' 'RNA.processing.3' end processing.PAP' 'niben101scf04024_24758-35332' '(at1g17980 : 780.0) Encodes a poly(A) polymerase. Located in the nucleus.; poly(A) polymerase 1 (PAPS1); CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); BEST Arabidopsis thaliana protein match is: poly(A) polymerase 2 (TAIR:AT2G25850.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37456 : 697.0) no description available & (gnl|cdd|80088 : 579.0) no description available & (reliability: 1560.0) & (original description: Putative PAPOLG, Description = Poly(A) polymerase gamma, PFAM = PF04928;PF04926;PF01909)' T '27.1.3.2' 'RNA.processing.3' end processing.CPSF160' 'niben101scf00485_55914-106381' '(at5g51660 : 2045.0) cleavage and polyadenylation specificity factor 160 (CPSF160); FUNCTIONS IN: nucleic acid binding; INVOLVED IN: mRNA cleavage, mRNA polyadenylation; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: damaged DNA binding protein 1A (TAIR:AT4G05420.2); Has 1568 Blast hits to 1022 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 654; Fungi - 429; Plants - 267; Viruses - 0; Other Eukaryotes - 218 (source: NCBI BLink). & (q7xwp1|cpsf1_orysa : 1862.0) Probable cleavage and polyadenylation specificity factor 160 kDa subunit (CPSF 160 kDa subunit) - Oryza sativa (Rice) & (gnl|cdd|37107 : 1219.0) no description available & (gnl|cdd|34762 : 180.0) no description available & (reliability: 4090.0) & (original description: Putative CPSF160, Description = Cleavage and polyadenylation specificity factor subunit 1, PFAM = PF10433;PF03178)' T '27.1.3.3' 'RNA.processing.3' end processing.CPSF100' 'niben044scf00018207ctg000_1-17830' '(at5g23880 : 1170.0) Encodes a protein similar to the 100kD subunit of cleavage and polyadenylation specificity factor (CPSF), the factor responsible for the recognition of the AAUAAA motif during mRNA polyadenylation. The protein interacts with a portion of a nuclear poly(A) polymerase. It is likely to be a part of the mRNA 3'end formation apparatus.; cleavage and polyadenylation specificity factor 100 (CPSF100); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: mRNA cleavage, mRNA polyadenylation, posttranscriptional gene silencing by RNA, embryo development ending in seed dormancy; LOCATED IN: mRNA cleavage and polyadenylation specificity factor complex, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-Casp domain (InterPro:IPR022712), RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73-I (TAIR:AT1G61010.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q652p4|cpsf2_orysa : 1081.0) Cleavage and polyadenylation specificity factor 100 kDa subunit (CPSF 100 kDa subunit) - Oryza sativa (Rice) & (gnl|cdd|36350 : 800.0) no description available & (gnl|cdd|31429 : 201.0) no description available & (reliability: 2340.0) & (original description: Putative CPSF100, Description = Cleavage and polyadenylation specificity factor subunit 2, PFAM = PF07521;PF16661;PF10996;PF13299)' T '27.1.3.3' 'RNA.processing.3' end processing.CPSF100' 'niben101scf00595_562084-565980' '(at5g23880 : 228.0) Encodes a protein similar to the 100kD subunit of cleavage and polyadenylation specificity factor (CPSF), the factor responsible for the recognition of the AAUAAA motif during mRNA polyadenylation. The protein interacts with a portion of a nuclear poly(A) polymerase. It is likely to be a part of the mRNA 3'end formation apparatus.; cleavage and polyadenylation specificity factor 100 (CPSF100); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: mRNA cleavage, mRNA polyadenylation, posttranscriptional gene silencing by RNA, embryo development ending in seed dormancy; LOCATED IN: mRNA cleavage and polyadenylation specificity factor complex, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-Casp domain (InterPro:IPR022712), RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73-I (TAIR:AT1G61010.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36350 : 181.0) no description available & (q652p4|cpsf2_orysa : 140.0) Cleavage and polyadenylation specificity factor 100 kDa subunit (CPSF 100 kDa subunit) - Oryza sativa (Rice) & (reliability: 456.0) & (original description: Putative cpsf2, Description = Cleavage and polyadenylation specificity factor subunit 2, PFAM = PF16661;PF16661)' T '27.1.3.3' 'RNA.processing.3' end processing.CPSF100' 'niben101scf12718_128786-159364' '(at5g23880 : 1162.0) Encodes a protein similar to the 100kD subunit of cleavage and polyadenylation specificity factor (CPSF), the factor responsible for the recognition of the AAUAAA motif during mRNA polyadenylation. The protein interacts with a portion of a nuclear poly(A) polymerase. It is likely to be a part of the mRNA 3'end formation apparatus.; cleavage and polyadenylation specificity factor 100 (CPSF100); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: mRNA cleavage, mRNA polyadenylation, posttranscriptional gene silencing by RNA, embryo development ending in seed dormancy; LOCATED IN: mRNA cleavage and polyadenylation specificity factor complex, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-Casp domain (InterPro:IPR022712), RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73-I (TAIR:AT1G61010.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q652p4|cpsf2_orysa : 1078.0) Cleavage and polyadenylation specificity factor 100 kDa subunit (CPSF 100 kDa subunit) - Oryza sativa (Rice) & (gnl|cdd|36350 : 787.0) no description available & (gnl|cdd|31429 : 194.0) no description available & (reliability: 2324.0) & (original description: Putative CPSF100, Description = Cleavage and polyadenylation specificity factor subunit 2, PFAM = PF16661;PF07521;PF10996;PF13299)' T '27.1.3.4' 'RNA.processing.3' end processing.CPSF73a' 'niben101scf08334_13263-25674' '(at1g61010 : 1183.0) cleavage and polyadenylation specificity factor 73-I (CPSF73-I); CONTAINS InterPro DOMAIN/s: Beta-Casp domain (InterPro:IPR022712), RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-lactamase-like (InterPro:IPR001279), Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term (InterPro:IPR021718); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73 kDa subunit-II (TAIR:AT2G01730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36352 : 888.0) no description available & (gnl|cdd|31429 : 373.0) no description available & (q652p4|cpsf2_orysa : 130.0) Cleavage and polyadenylation specificity factor 100 kDa subunit (CPSF 100 kDa subunit) - Oryza sativa (Rice) & (reliability: 2366.0) & (original description: Putative ysh1, Description = Endoribonuclease YSH1, PFAM = PF00753;PF11718;PF07521;PF10996)' T '27.1.3.5' 'RNA.processing.3' end processing.CPSF73b' 'nbv0.3scaffold54658_1-13557' '(at2g01730 : 574.0) a homolog of cleavage and polyadenylation specificity factor that plays an essential role in the development of female gametophyte and embryo; cleavage and polyadenylation specificity factor 73 kDa subunit-II (CPSF73-II); CONTAINS InterPro DOMAIN/s: RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-Casp domain (InterPro:IPR022712), Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73-I (TAIR:AT1G61010.3); Has 5072 Blast hits to 5039 proteins in 1435 species: Archae - 491; Bacteria - 2753; Metazoa - 569; Fungi - 259; Plants - 193; Viruses - 0; Other Eukaryotes - 807 (source: NCBI BLink). & (gnl|cdd|36351 : 547.0) no description available & (gnl|cdd|31429 : 227.0) no description available & (q652p4|cpsf2_orysa : 100.0) Cleavage and polyadenylation specificity factor 100 kDa subunit (CPSF 100 kDa subunit) - Oryza sativa (Rice) & (reliability: 1148.0) & (original description: Putative FEG, Description = Integrator complex subunit 11, PFAM = PF10996;PF00753)' T '27.1.3.5' 'RNA.processing.3' end processing.CPSF73b' 'niben101scf04568_233383-250349' '(at2g01730 : 577.0) a homolog of cleavage and polyadenylation specificity factor that plays an essential role in the development of female gametophyte and embryo; cleavage and polyadenylation specificity factor 73 kDa subunit-II (CPSF73-II); CONTAINS InterPro DOMAIN/s: RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-Casp domain (InterPro:IPR022712), Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73-I (TAIR:AT1G61010.3); Has 5072 Blast hits to 5039 proteins in 1435 species: Archae - 491; Bacteria - 2753; Metazoa - 569; Fungi - 259; Plants - 193; Viruses - 0; Other Eukaryotes - 807 (source: NCBI BLink). & (gnl|cdd|36351 : 481.0) no description available & (gnl|cdd|31429 : 204.0) no description available & (q652p4|cpsf2_orysa : 80.1) Cleavage and polyadenylation specificity factor 100 kDa subunit (CPSF 100 kDa subunit) - Oryza sativa (Rice) & (reliability: 1154.0) & (original description: Putative FEG, Description = Integrator complex subunit 11, PFAM = PF10996;PF07521)' T '27.1.3.5' 'RNA.processing.3' end processing.CPSF73b' 'niben101scf08368_156952-194886' '(at2g01730 : 832.0) a homolog of cleavage and polyadenylation specificity factor that plays an essential role in the development of female gametophyte and embryo; cleavage and polyadenylation specificity factor 73 kDa subunit-II (CPSF73-II); CONTAINS InterPro DOMAIN/s: RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-Casp domain (InterPro:IPR022712), Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73-I (TAIR:AT1G61010.3); Has 5072 Blast hits to 5039 proteins in 1435 species: Archae - 491; Bacteria - 2753; Metazoa - 569; Fungi - 259; Plants - 193; Viruses - 0; Other Eukaryotes - 807 (source: NCBI BLink). & (gnl|cdd|36351 : 757.0) no description available & (gnl|cdd|31429 : 320.0) no description available & (q652p4|cpsf2_orysa : 125.0) Cleavage and polyadenylation specificity factor 100 kDa subunit (CPSF 100 kDa subunit) - Oryza sativa (Rice) & (reliability: 1664.0) & (original description: Putative FEG, Description = Integrator complex subunit 11, PFAM = PF10996;PF07521;PF13639;PF16661)' T '27.1.3.5' 'RNA.processing.3' end processing.CPSF73b' 'niben101scf08368_157252-182994' '(at2g01730 : 733.0) a homolog of cleavage and polyadenylation specificity factor that plays an essential role in the development of female gametophyte and embryo; cleavage and polyadenylation specificity factor 73 kDa subunit-II (CPSF73-II); CONTAINS InterPro DOMAIN/s: RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-Casp domain (InterPro:IPR022712), Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73-I (TAIR:AT1G61010.3); Has 5072 Blast hits to 5039 proteins in 1435 species: Archae - 491; Bacteria - 2753; Metazoa - 569; Fungi - 259; Plants - 193; Viruses - 0; Other Eukaryotes - 807 (source: NCBI BLink). & (gnl|cdd|36351 : 632.0) no description available & (gnl|cdd|31429 : 274.0) no description available & (q652p4|cpsf2_orysa : 120.0) Cleavage and polyadenylation specificity factor 100 kDa subunit (CPSF 100 kDa subunit) - Oryza sativa (Rice) & (reliability: 1466.0) & (original description: Putative cpsf3l, Description = Integrator complex subunit 11, PFAM = PF10996;PF07521;PF16661)' T '27.1.3.6' 'RNA.processing.3' end processing.CPSF30' 'nbv0.3scaffold20992_20267-32663' '(at1g30460 : 530.0) Encodes AtCPSF30, the 30-KDa subunit of cleavage and polyadenylation specificity factor. AtCPSF30 is a probable processing endonuclease. Nucleus-localized RNA binding protein capable of interacting with itself and with calmodulin. Its RNA-binding activity is inhibited by calmodulin in a calcium-dependent fashion.; cleavage and polyadenylation specificity factor 30 (CPSF30); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G21580.1); Has 1436 Blast hits to 1371 proteins in 231 species: Archae - 0; Bacteria - 2; Metazoa - 545; Fungi - 336; Plants - 156; Viruses - 9; Other Eukaryotes - 388 (source: NCBI BLink). & (gnl|cdd|37113 : 292.0) no description available & (gnl|cdd|67749 : 113.0) no description available & (reliability: 1060.0) & (original description: Putative Os06g0677700, Description = Zinc finger CCCH domain-containing protein 45, PFAM = PF04146)' T '27.1.3.6' 'RNA.processing.3' end processing.CPSF30' 'nbv0.3scaffold24383_12386-27032' '(at1g30460 : 541.0) Encodes AtCPSF30, the 30-KDa subunit of cleavage and polyadenylation specificity factor. AtCPSF30 is a probable processing endonuclease. Nucleus-localized RNA binding protein capable of interacting with itself and with calmodulin. Its RNA-binding activity is inhibited by calmodulin in a calcium-dependent fashion.; cleavage and polyadenylation specificity factor 30 (CPSF30); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G21580.1); Has 1436 Blast hits to 1371 proteins in 231 species: Archae - 0; Bacteria - 2; Metazoa - 545; Fungi - 336; Plants - 156; Viruses - 9; Other Eukaryotes - 388 (source: NCBI BLink). & (gnl|cdd|37113 : 308.0) no description available & (gnl|cdd|67749 : 116.0) no description available & (reliability: 1082.0) & (original description: Putative CPSF30, Description = 30-kDa cleavage and polyadenylation specificity factor 30, PFAM = PF04146)' T '27.1.3.6' 'RNA.processing.3' end processing.CPSF30' 'nbv0.5scaffold1071_408700-425486' '(at1g30460 : 510.0) Encodes AtCPSF30, the 30-KDa subunit of cleavage and polyadenylation specificity factor. AtCPSF30 is a probable processing endonuclease. Nucleus-localized RNA binding protein capable of interacting with itself and with calmodulin. Its RNA-binding activity is inhibited by calmodulin in a calcium-dependent fashion.; cleavage and polyadenylation specificity factor 30 (CPSF30); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G21580.1); Has 1436 Blast hits to 1371 proteins in 231 species: Archae - 0; Bacteria - 2; Metazoa - 545; Fungi - 336; Plants - 156; Viruses - 9; Other Eukaryotes - 388 (source: NCBI BLink). & (gnl|cdd|37113 : 314.0) no description available & (gnl|cdd|67749 : 118.0) no description available & (reliability: 1020.0) & (original description: Putative OXT6, Description = Putative ATP-dependent RNA helicase YTHDC2, PFAM = PF04146)' T '27.1.3.6' 'RNA.processing.3' end processing.CPSF30' 'niben044scf00002997ctg026_666-8914' '(at1g30460 : 331.0) Encodes AtCPSF30, the 30-KDa subunit of cleavage and polyadenylation specificity factor. AtCPSF30 is a probable processing endonuclease. Nucleus-localized RNA binding protein capable of interacting with itself and with calmodulin. Its RNA-binding activity is inhibited by calmodulin in a calcium-dependent fashion.; cleavage and polyadenylation specificity factor 30 (CPSF30); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G21580.1); Has 1436 Blast hits to 1371 proteins in 231 species: Archae - 0; Bacteria - 2; Metazoa - 545; Fungi - 336; Plants - 156; Viruses - 9; Other Eukaryotes - 388 (source: NCBI BLink). & (gnl|cdd|37113 : 234.0) no description available & (reliability: 662.0) & (original description: Putative CPSF30, Description = 30-kDa cleavage and polyadenylation specificity factor 30, PFAM = PF04146)' T '27.1.3.6' 'RNA.processing.3' end processing.CPSF30' 'niben044scf00024560ctg024_6098-8650' '(at1g30460 : 132.0) Encodes AtCPSF30, the 30-KDa subunit of cleavage and polyadenylation specificity factor. AtCPSF30 is a probable processing endonuclease. Nucleus-localized RNA binding protein capable of interacting with itself and with calmodulin. Its RNA-binding activity is inhibited by calmodulin in a calcium-dependent fashion.; cleavage and polyadenylation specificity factor 30 (CPSF30); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G21580.1); Has 1436 Blast hits to 1371 proteins in 231 species: Archae - 0; Bacteria - 2; Metazoa - 545; Fungi - 336; Plants - 156; Viruses - 9; Other Eukaryotes - 388 (source: NCBI BLink). & (gnl|cdd|37113 : 124.0) no description available & (reliability: 264.0) & (original description: Putative OXT6, Description = Cleavage and polyadenylation specificity factor CPSF30, PFAM = PF04146)' T '27.1.3.6' 'RNA.processing.3' end processing.CPSF30' 'niben101scf01281_695170-720102' '(at1g30460 : 493.0) Encodes AtCPSF30, the 30-KDa subunit of cleavage and polyadenylation specificity factor. AtCPSF30 is a probable processing endonuclease. Nucleus-localized RNA binding protein capable of interacting with itself and with calmodulin. Its RNA-binding activity is inhibited by calmodulin in a calcium-dependent fashion.; cleavage and polyadenylation specificity factor 30 (CPSF30); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G21580.1); Has 1436 Blast hits to 1371 proteins in 231 species: Archae - 0; Bacteria - 2; Metazoa - 545; Fungi - 336; Plants - 156; Viruses - 9; Other Eukaryotes - 388 (source: NCBI BLink). & (gnl|cdd|37113 : 293.0) no description available & (gnl|cdd|67749 : 99.6) no description available & (reliability: 986.0) & (original description: Putative Os06g0677700, Description = Zinc finger CCCH domain-containing protein 45, PFAM = PF04146)' T '27.1.3.6' 'RNA.processing.3' end processing.CPSF30' 'niben101scf01395_423826-440378' '(at1g30460 : 508.0) Encodes AtCPSF30, the 30-KDa subunit of cleavage and polyadenylation specificity factor. AtCPSF30 is a probable processing endonuclease. Nucleus-localized RNA binding protein capable of interacting with itself and with calmodulin. Its RNA-binding activity is inhibited by calmodulin in a calcium-dependent fashion.; cleavage and polyadenylation specificity factor 30 (CPSF30); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G21580.1); Has 1436 Blast hits to 1371 proteins in 231 species: Archae - 0; Bacteria - 2; Metazoa - 545; Fungi - 336; Plants - 156; Viruses - 9; Other Eukaryotes - 388 (source: NCBI BLink). & (gnl|cdd|37113 : 292.0) no description available & (gnl|cdd|67749 : 115.0) no description available & (reliability: 1016.0) & (original description: Putative CPSF30, Description = 30-kDa cleavage and polyadenylation specificity factor 30, PFAM = PF04146)' T '27.1.3.7' 'RNA.processing.3' end processing.Fip1' 'niben101scf08006_115852-127865' '(at5g58040 : 80.1) Encodes a subunit of the polyadenylation apparatus that interacts with and stimulates the activity of poly(A) polymerase. Additionally , it interacts with several polyadenylation factor subunits and is an RNA-binding protein. It is suggested that this protein coordinates a number of polyadenylation factor subunits with PAP and with RNA.; homolog of yeast FIP1 [V] (FIP1[V]); FUNCTIONS IN: protein binding, RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fip1 (InterPro:IPR007854); BEST Arabidopsis thaliana protein match is: fip1 motif-containing protein (TAIR:AT3G66652.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative , Description = , PFAM = PF05182)' T '27.1.3.7' 'RNA.processing.3' end processing.Fip1' 'niben101scf11874_154415-170194' '(at5g58040 : 220.0) Encodes a subunit of the polyadenylation apparatus that interacts with and stimulates the activity of poly(A) polymerase. Additionally , it interacts with several polyadenylation factor subunits and is an RNA-binding protein. It is suggested that this protein coordinates a number of polyadenylation factor subunits with PAP and with RNA.; homolog of yeast FIP1 [V] (FIP1[V]); FUNCTIONS IN: protein binding, RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fip1 (InterPro:IPR007854); BEST Arabidopsis thaliana protein match is: fip1 motif-containing protein (TAIR:AT3G66652.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36267 : 97.9) no description available & (gnl|cdd|68743 : 87.3) no description available & (reliability: 440.0) & (original description: Putative FIPS5, Description = AtFIP1(V), PFAM = PF05182)' T '27.1.3.8' 'RNA.processing.3' end processing.CstF77' 'nbv0.3scaffold23481_2900-30306' '(at1g17760 : 886.0) Encodes a homolog of the mammalian protein CstF77, a polyadenylation factor subunit. RNA 3′-endñprocessing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC.; CSTF77; FUNCTIONS IN: protein binding, mRNA binding, transcription repressor activity; INVOLVED IN: RNA 3'-end processing, mRNA processing, embryo sac development; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Suppressor of forked (InterPro:IPR008847); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 2092 Blast hits to 1537 proteins in 234 species: Archae - 0; Bacteria - 14; Metazoa - 771; Fungi - 713; Plants - 343; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (gnl|cdd|37125 : 415.0) no description available & (gnl|cdd|34710 : 280.0) no description available & (reliability: 1772.0) & (original description: Putative CSTF77, Description = Cleavage stimulation factor subunit 77, PFAM = PF05843)' T '27.1.3.8' 'RNA.processing.3' end processing.CstF77' 'niben044scf00000739ctg000_1-20874' '(at1g17760 : 523.0) Encodes a homolog of the mammalian protein CstF77, a polyadenylation factor subunit. RNA 3′-endñprocessing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC.; CSTF77; FUNCTIONS IN: protein binding, mRNA binding, transcription repressor activity; INVOLVED IN: RNA 3'-end processing, mRNA processing, embryo sac development; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Suppressor of forked (InterPro:IPR008847); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 2092 Blast hits to 1537 proteins in 234 species: Archae - 0; Bacteria - 14; Metazoa - 771; Fungi - 713; Plants - 343; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (gnl|cdd|37125 : 246.0) no description available & (gnl|cdd|34710 : 179.0) no description available & (reliability: 1046.0) & (original description: Putative RNA14, Description = Cleavage stimulation factor subunit 3, PFAM = PF13428)' T '27.1.3.8' 'RNA.processing.3' end processing.CstF77' 'niben101scf00321_52660-72509' '(at1g17760 : 945.0) Encodes a homolog of the mammalian protein CstF77, a polyadenylation factor subunit. RNA 3′-endñprocessing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC.; CSTF77; FUNCTIONS IN: protein binding, mRNA binding, transcription repressor activity; INVOLVED IN: RNA 3'-end processing, mRNA processing, embryo sac development; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Suppressor of forked (InterPro:IPR008847); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 2092 Blast hits to 1537 proteins in 234 species: Archae - 0; Bacteria - 14; Metazoa - 771; Fungi - 713; Plants - 343; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (gnl|cdd|37125 : 428.0) no description available & (gnl|cdd|34710 : 282.0) no description available & (reliability: 1890.0) & (original description: Putative CSTF77, Description = Cleavage stimulation factor subunit 77, PFAM = PF05843;PF13428)' T '27.1.3.8' 'RNA.processing.3' end processing.CstF77' 'niben101scf06213_47790-75377' '(at1g17760 : 892.0) Encodes a homolog of the mammalian protein CstF77, a polyadenylation factor subunit. RNA 3′-endñprocessing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC.; CSTF77; FUNCTIONS IN: protein binding, mRNA binding, transcription repressor activity; INVOLVED IN: RNA 3'-end processing, mRNA processing, embryo sac development; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Suppressor of forked (InterPro:IPR008847); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 2092 Blast hits to 1537 proteins in 234 species: Archae - 0; Bacteria - 14; Metazoa - 771; Fungi - 713; Plants - 343; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (gnl|cdd|37125 : 414.0) no description available & (gnl|cdd|69373 : 278.0) no description available & (reliability: 1784.0) & (original description: Putative CSTF77, Description = Cleavage stimulation factor subunit 77, PFAM = PF05843)' T '27.1.3.9' 'RNA.processing.3' end processing.CstF64' 'niben044scf00017115ctg001_7613-16201' '(at1g71800 : 262.0) RNA 3′-endñprocessing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC.; cleavage stimulating factor 64 (CSTF64); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.3); Has 21430 Blast hits to 18533 proteins in 865 species: Archae - 10; Bacteria - 1688; Metazoa - 9678; Fungi - 3064; Plants - 4656; Viruses - 0; Other Eukaryotes - 2334 (source: NCBI BLink). & (gnl|cdd|35331 : 106.0) no description available & (gnl|cdd|84495 : 94.1) no description available & (reliability: 524.0) & (original description: Putative CSTF64, Description = Cleavage stimulating factor 64, PFAM = PF00076;PF14327;PF14304)' T '27.1.3.9' 'RNA.processing.3' end processing.CstF64' 'niben101scf03445_276087-284584' '(at1g71800 : 265.0) RNA 3′-endñprocessing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC.; cleavage stimulating factor 64 (CSTF64); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.3); Has 21430 Blast hits to 18533 proteins in 865 species: Archae - 10; Bacteria - 1688; Metazoa - 9678; Fungi - 3064; Plants - 4656; Viruses - 0; Other Eukaryotes - 2334 (source: NCBI BLink). & (gnl|cdd|35331 : 110.0) no description available & (gnl|cdd|84495 : 94.1) no description available & (reliability: 530.0) & (original description: Putative CSTF64, Description = Cleavage stimulating factor 64, PFAM = PF14327;PF00076;PF14304)' T '27.1.3.10' 'RNA.processing.3' end processing.CstF50' 'niben101scf00337_672835-683279' '(at5g60940 : 625.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35859 : 503.0) no description available & (gnl|cdd|29257 : 157.0) no description available & (reliability: 1250.0) & (original description: Putative CSTF1, Description = Cleavage stimulation factor subunit 1, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '27.1.3.11' 'RNA.processing.3' end processing.Pfs2' 'nbv0.5scaffold578_534430-560019' '(at5g13480 : 652.0) Encodes a protein with similarity to yeast Pfs2p, an mRNA processing factor. Involved in regulation of flowering time; affects FCA mRNA processing. Homozygous mutants are late flowering, null alleles are embryo lethal.; FY; FUNCTIONS IN: protein binding; INVOLVED IN: mRNA processing, regulation of flower development, embryo development ending in seed dormancy; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: pleiotropic regulatory locus 1 (TAIR:AT4G15900.1). & (gnl|cdd|35505 : 532.0) no description available & (gnl|cdd|29257 : 234.0) no description available & (p93107|pf20_chlre : 90.5) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1304.0) & (original description: Putative FY, Description = Flowering time control protein FY, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '27.1.3.11' 'RNA.processing.3' end processing.Pfs2' 'niben044scf00004544ctg004_1-8588' '(at5g13480 : 182.0) Encodes a protein with similarity to yeast Pfs2p, an mRNA processing factor. Involved in regulation of flowering time; affects FCA mRNA processing. Homozygous mutants are late flowering, null alleles are embryo lethal.; FY; FUNCTIONS IN: protein binding; INVOLVED IN: mRNA processing, regulation of flower development, embryo development ending in seed dormancy; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: pleiotropic regulatory locus 1 (TAIR:AT4G15900.1). & (gnl|cdd|35505 : 121.0) no description available & (reliability: 364.0) & (original description: Putative wdr33, Description = Pre-mRNA 3' end processing protein WDR33, PFAM = )' T '27.1.3.11' 'RNA.processing.3' end processing.Pfs2' 'niben101scf02944_485-24291' '(at5g13480 : 686.0) Encodes a protein with similarity to yeast Pfs2p, an mRNA processing factor. Involved in regulation of flowering time; affects FCA mRNA processing. Homozygous mutants are late flowering, null alleles are embryo lethal.; FY; FUNCTIONS IN: protein binding; INVOLVED IN: mRNA processing, regulation of flower development, embryo development ending in seed dormancy; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: pleiotropic regulatory locus 1 (TAIR:AT4G15900.1). & (gnl|cdd|35505 : 536.0) no description available & (gnl|cdd|29257 : 232.0) no description available & (p93107|pf20_chlre : 90.1) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1372.0) & (original description: Putative FY, Description = Flowering time control protein FY, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '27.1.3.12' 'RNA.processing.3' end processing.CFIm68/59' '' '' '27.1.3.13' 'RNA.processing.3' end processing.CFIm25' 'nbv0.5scaffold3528_237136-242434' '(at4g29820 : 287.0) Encodes a homolog of the protein CFI-25, a polyadenylation factor subunit.; homolog of CFIM-25 (CFIM-25); CONTAINS InterPro DOMAIN/s: Cleavage/polyadenylation specificity factor, 25kDa subunit (InterPro:IPR016706); BEST Arabidopsis thaliana protein match is: Cleavage/polyadenylation specificity factor, 25kDa subunit (TAIR:AT4G25550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36902 : 256.0) no description available & (reliability: 574.0) & (original description: Putative CFIS1, Description = Pre-mRNA cleavage factor Im 25 kDa subunit 1, PFAM = PF13869)' T '27.1.3.13' 'RNA.processing.3' end processing.CFIm25' 'niben101scf00611_746028-751357' '(at4g29820 : 284.0) Encodes a homolog of the protein CFI-25, a polyadenylation factor subunit.; homolog of CFIM-25 (CFIM-25); CONTAINS InterPro DOMAIN/s: Cleavage/polyadenylation specificity factor, 25kDa subunit (InterPro:IPR016706); BEST Arabidopsis thaliana protein match is: Cleavage/polyadenylation specificity factor, 25kDa subunit (TAIR:AT4G25550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36902 : 254.0) no description available & (reliability: 568.0) & (original description: Putative CFIS1, Description = Pre-mRNA cleavage factor Im 25 kDa subunit 1, PFAM = PF13869)' T '27.1.3.13' 'RNA.processing.3' end processing.CFIm25' 'niben101scf02266_185771-193606' '(at4g25550 : 365.0) Cleavage/polyadenylation specificity factor, 25kDa subunit; CONTAINS InterPro DOMAIN/s: Cleavage/polyadenylation specificity factor, 25kDa subunit (InterPro:IPR016706); BEST Arabidopsis thaliana protein match is: homolog of CFIM-25 (TAIR:AT4G29820.1); Has 397 Blast hits to 397 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 171; Fungi - 88; Plants - 70; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|36902 : 313.0) no description available & (reliability: 730.0) & (original description: Putative CFIS2, Description = Pre-mRNA cleavage factor Im 25 kDa subunit 2, PFAM = PF13869)' T '27.1.3.13' 'RNA.processing.3' end processing.CFIm25' 'niben101scf04406_287748-294148' '(at4g25550 : 283.0) Cleavage/polyadenylation specificity factor, 25kDa subunit; CONTAINS InterPro DOMAIN/s: Cleavage/polyadenylation specificity factor, 25kDa subunit (InterPro:IPR016706); BEST Arabidopsis thaliana protein match is: homolog of CFIM-25 (TAIR:AT4G29820.1); Has 397 Blast hits to 397 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 171; Fungi - 88; Plants - 70; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|36902 : 242.0) no description available & (reliability: 566.0) & (original description: Putative cpsf5, Description = Cleavage and polyadenylation specificity factor subunit 5, PFAM = PF13869)' T '27.1.3.13' 'RNA.processing.3' end processing.CFIm25' 'niben101scf10103_284404-289702' '(at4g29820 : 210.0) Encodes a homolog of the protein CFI-25, a polyadenylation factor subunit.; homolog of CFIM-25 (CFIM-25); CONTAINS InterPro DOMAIN/s: Cleavage/polyadenylation specificity factor, 25kDa subunit (InterPro:IPR016706); BEST Arabidopsis thaliana protein match is: Cleavage/polyadenylation specificity factor, 25kDa subunit (TAIR:AT4G25550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36902 : 183.0) no description available & (reliability: 420.0) & (original description: Putative BnaA01g07160D, Description = BnaA01g07160D protein, PFAM = PF13869)' T '27.1.3.14' 'RNA.processing.3' end processing.Clp1' 'niben101scf00851_271688-285327' '(at3g04680 : 637.0) Encodes a nuclear protein that functions in mRNA processing. Mutations in this gene cause embryo lethality and reduced transmission through the female gametophyte. Over-expression of a CLPS3:TAP protein changes the relative levels of two alternatively processed FCA transcripts. It also causes abnormal phyllotaxy and flower development, early flowering under long and short days, and increased levels of CUC1 and WUS expression.; CLP-similar protein 3 (CLPS3); CONTAINS InterPro DOMAIN/s: Pre-mRNA cleavage complex II Clp1 (InterPro:IPR010655); BEST Arabidopsis thaliana protein match is: CLP1-similar protein 5 (TAIR:AT5G39930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37960 : 537.0) no description available & (gnl|cdd|87158 : 367.0) no description available & (reliability: 1274.0) & (original description: Putative CLPS3, Description = Protein CLP1 homolog, PFAM = PF06807;PF16573;PF16575)' T '27.1.3.15' 'RNA.processing.3' end processing.Pcf11p' 'niben101scf05463_245201-257626' '(at4g04885 : 305.0) Encodes PCFS4 (Pcf11p-similar protein 4), a homolog of yeast polyadenylation factor Protein 1 of Cleavage Factor (Pcf11p). Regulates FCA (AT4G16280) mRNA polyadenylation. Promotes flowering time.; PCF11P-similar protein 4 (PCFS4); FUNCTIONS IN: zinc ion binding; INVOLVED IN: positive regulation of flower development, mRNA polyadenylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: shoot apical meristem, sepal, gynoecium, stamen, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), Zinc finger, C2H2-type (InterPro:IPR007087), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: Pre-mRNA cleavage complex II (TAIR:AT1G66500.1); Has 656 Blast hits to 406 proteins in 169 species: Archae - 0; Bacteria - 0; Metazoa - 208; Fungi - 279; Plants - 120; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|48659 : 127.0) no description available & (gnl|cdd|37282 : 126.0) no description available & (reliability: 610.0) & (original description: Putative PCFS4, Description = Polyadenylation and cleavage factor homolog 4, PFAM = PF04818)' T '27.1.3.15' 'RNA.processing.3' end processing.Pcf11p' 'niben101scf06769_105835-114823' '(at2g36480 : 240.0) ENTH/VHS family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), Zinc finger, C2H2-type (InterPro:IPR007087), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: PCF11P-similar protein 4 (TAIR:AT4G04885.1); Has 1695 Blast hits to 821 proteins in 229 species: Archae - 0; Bacteria - 223; Metazoa - 395; Fungi - 309; Plants - 134; Viruses - 0; Other Eukaryotes - 634 (source: NCBI BLink). & (gnl|cdd|48659 : 123.0) no description available & (gnl|cdd|37282 : 115.0) no description available & (reliability: 480.0) & (original description: Putative DML1, Description = ARAD1A12518p, PFAM = PF04818)' T '27.1.3.16' 'RNA.processing.3' end processing.Symplekin' 'niben044scf00016342ctg016_18171-25474' '(at5g01400 : 300.0) Encodes a Symplekin/Pta1 homologue which would have the potential to interact with either ESP1 or AtCstF64.; ENHANCED SILENCING PHENOTYPE 4 (ESP4); FUNCTIONS IN: binding; INVOLVED IN: posttranscriptional gene silencing by RNA, RNA processing; LOCATED IN: mRNA cleavage and polyadenylation specificity factor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Symplekin tight junction protein C-terminal (InterPro:IPR022075), Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF3453 (InterPro:IPR021850); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27595.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37106 : 139.0) no description available & (reliability: 600.0) & (original description: Putative ESP4, Description = HEAT repeat-containing protein isoform 1, PFAM = PF11935)' T '27.1.3.16' 'RNA.processing.3' end processing.Symplekin' 'niben101scf03338_151801-195865' '(at1g27595 : 708.0) CONTAINS InterPro DOMAIN/s: Symplekin tight junction protein C-terminal (InterPro:IPR022075); BEST Arabidopsis thaliana protein match is: HEAT repeat-containing protein (TAIR:AT5G01400.1); Has 593 Blast hits to 297 proteins in 111 species: Archae - 0; Bacteria - 3; Metazoa - 139; Fungi - 49; Plants - 57; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink). & (gnl|cdd|37106 : 466.0) no description available & (reliability: 1416.0) & (original description: Putative At1g27595, Description = Putative uncharacterized protein At1g27595, PFAM = PF11935;PF12295)' T '27.1.3.16' 'RNA.processing.3' end processing.Symplekin' 'niben101scf04722_307967-333672' '(at5g01400 : 1080.0) Encodes a Symplekin/Pta1 homologue which would have the potential to interact with either ESP1 or AtCstF64.; ENHANCED SILENCING PHENOTYPE 4 (ESP4); FUNCTIONS IN: binding; INVOLVED IN: posttranscriptional gene silencing by RNA, RNA processing; LOCATED IN: mRNA cleavage and polyadenylation specificity factor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Symplekin tight junction protein C-terminal (InterPro:IPR022075), Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF3453 (InterPro:IPR021850); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27595.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37106 : 403.0) no description available & (reliability: 2160.0) & (original description: Putative ESP4, Description = Symplekin, PFAM = PF12295;PF11935)' T '27.1.3.17' 'RNA.processing.3' end processing.PabN' 'nbv0.3scaffold4939_47226-64561' '(at5g65260 : 224.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G10350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39410 : 150.0) no description available & (reliability: 448.0) & (original description: Putative PABN1, Description = Polyadenylate-binding protein 1, PFAM = PF00076)' T '27.1.3.17' 'RNA.processing.3' end processing.PabN' 'nbv0.3scaffold16710_29519-37628' '(at5g10350 : 284.0) RNA-binding (RRM/RBD/RNP motifs) family protein; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G65260.1). & (gnl|cdd|39410 : 158.0) no description available & (reliability: 568.0) & (original description: Putative PABN2, Description = Polyadenylate-binding protein 2, PFAM = PF00076)' T '27.1.3.17' 'RNA.processing.3' end processing.PabN' 'nbv0.5scaffold7150_8734-15470' '(at5g65260 : 152.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G10350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39410 : 109.0) no description available & (reliability: 304.0) & (original description: Putative PABN1, Description = Polyadenylate-binding protein 1, PFAM = PF00076)' T '27.1.3.17' 'RNA.processing.3' end processing.PabN' 'niben101scf00783_257048-266258' '(at5g65260 : 270.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G10350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39410 : 159.0) no description available & (reliability: 540.0) & (original description: Putative PABN2, Description = Polyadenylate-binding protein 2, PFAM = PF00076)' T '27.1.3.17' 'RNA.processing.3' end processing.PabN' 'niben101scf03496_175143-180911' '(at5g10350 : 232.0) RNA-binding (RRM/RBD/RNP motifs) family protein; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G65260.1). & (gnl|cdd|39410 : 142.0) no description available & (reliability: 464.0) & (original description: Putative PABN3, Description = Polyadenylate-binding protein 3, PFAM = PF00076)' T '27.1.3.17' 'RNA.processing.3' end processing.PabN' 'niben101scf04761_36434-39021' '(at5g65260 : 158.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G10350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39410 : 106.0) no description available & (reliability: 316.0) & (original description: Putative PABN1, Description = Polyadenylate-binding protein 1, PFAM = PF00076)' T '27.1.3.17' 'RNA.processing.3' end processing.PabN' 'niben101scf04926_83526-110129' '(at5g65260 : 225.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G10350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39410 : 152.0) no description available & (reliability: 450.0) & (original description: Putative pab2, Description = Polyadenylate-binding protein 2, PFAM = PF00076)' T '27.1.4' 'RNA.processing.5' end processing' '' '' '27.1.5' 'RNA.processing.base modifications' 'nbv0.3scaffold39561_10941-19228' '(q6eu10|mta70_orysa : 647.0) Probable N6-adenosine-methyltransferase MT-A70-like (EC 2.1.1.62) - Oryza sativa (Rice) & (at4g10760 : 635.0) mRNAadenosine methylase (MTA); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy, mRNA methylation; LOCATED IN: nuclear speck, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MT-A70 (InterPro:IPR007757); BEST Arabidopsis thaliana protein match is: Methyltransferase MT-A70 family protein (TAIR:AT4G09980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37309 : 602.0) no description available & (gnl|cdd|68631 : 215.0) no description available & (reliability: 1270.0) & (original description: Putative MTA, Description = N6-adenosine-methyltransferase MT-A70-like, PFAM = PF05063)' T '27.1.5' 'RNA.processing.base modifications' 'niben101scf01706_60016-68382' '(q6eu10|mta70_orysa : 647.0) Probable N6-adenosine-methyltransferase MT-A70-like (EC 2.1.1.62) - Oryza sativa (Rice) & (at4g10760 : 635.0) mRNAadenosine methylase (MTA); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy, mRNA methylation; LOCATED IN: nuclear speck, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MT-A70 (InterPro:IPR007757); BEST Arabidopsis thaliana protein match is: Methyltransferase MT-A70 family protein (TAIR:AT4G09980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37309 : 602.0) no description available & (gnl|cdd|68631 : 215.0) no description available & (reliability: 1270.0) & (original description: Putative MTA, Description = N6-adenosine-methyltransferase MT-A70-like, PFAM = PF05063)' T '27.1.10' 'RNA.processing.plastidial RNA' '' '' '27.1.10.1' 'RNA.processing.plastidial RNA.RNE Complex' '' '' '27.1.10.1.1' 'RNA.processing.plastidial RNA.RNE Complex.RNE' 'niben044scf00044848ctg001_1431-8533' '(at2g04270 : 538.0) Similar to E.coli endoribonuclease E. Functions as a ribonuclease, is located in the chloroplast, and is involved in chloroplast development. Loss of function mutants are white and arrest at the cotyledon stage. The phenotype is rescued by providing sucrose.; RNAse E/G-like (RNEE/G); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Carbohydrate-binding-like fold (InterPro:IPR013784), Ribonuclease E/G (InterPro:IPR004659), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Immunoglobulin-like fold (InterPro:IPR013783), RNA-binding protein AU-1/Ribonuclease E/G (InterPro:IPR019307). & (gnl|cdd|31719 : 211.0) no description available & (reliability: 1076.0) & (original description: Putative cafA, Description = Ribonuclease G, PFAM = PF10150)' T '27.1.10.1.1' 'RNA.processing.plastidial RNA.RNE Complex.RNE' 'niben101scf01497_400921-417853' '(at2g04270 : 767.0) Similar to E.coli endoribonuclease E. Functions as a ribonuclease, is located in the chloroplast, and is involved in chloroplast development. Loss of function mutants are white and arrest at the cotyledon stage. The phenotype is rescued by providing sucrose.; RNAse E/G-like (RNEE/G); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Carbohydrate-binding-like fold (InterPro:IPR013784), Ribonuclease E/G (InterPro:IPR004659), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Immunoglobulin-like fold (InterPro:IPR013783), RNA-binding protein AU-1/Ribonuclease E/G (InterPro:IPR019307). & (gnl|cdd|31719 : 273.0) no description available & (reliability: 1534.0) & (original description: Putative RNE, Description = Ribonuclease E/G-like protein, chloroplastic, PFAM = PF10150)' T '27.1.10.1.1' 'RNA.processing.plastidial RNA.RNE Complex.RNE' 'niben101scf01497_414734-417495' '(at2g04270 : 249.0) Similar to E.coli endoribonuclease E. Functions as a ribonuclease, is located in the chloroplast, and is involved in chloroplast development. Loss of function mutants are white and arrest at the cotyledon stage. The phenotype is rescued by providing sucrose.; RNAse E/G-like (RNEE/G); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Carbohydrate-binding-like fold (InterPro:IPR013784), Ribonuclease E/G (InterPro:IPR004659), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Immunoglobulin-like fold (InterPro:IPR013783), RNA-binding protein AU-1/Ribonuclease E/G (InterPro:IPR019307). & (reliability: 498.0) & (original description: Putative RNE, Description = Ribonuclease E/G-like protein, chloroplastic, PFAM = PF10150)' T '27.1.10.1.1' 'RNA.processing.plastidial RNA.RNE Complex.RNE' 'niben101scf06975_42864-51797' '(at2g04270 : 776.0) Similar to E.coli endoribonuclease E. Functions as a ribonuclease, is located in the chloroplast, and is involved in chloroplast development. Loss of function mutants are white and arrest at the cotyledon stage. The phenotype is rescued by providing sucrose.; RNAse E/G-like (RNEE/G); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Carbohydrate-binding-like fold (InterPro:IPR013784), Ribonuclease E/G (InterPro:IPR004659), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Immunoglobulin-like fold (InterPro:IPR013783), RNA-binding protein AU-1/Ribonuclease E/G (InterPro:IPR019307). & (gnl|cdd|31719 : 272.0) no description available & (reliability: 1552.0) & (original description: Putative rne, Description = Ribonuclease, Rne/Rng family, PFAM = PF10150)' T '27.1.10.1.2' 'RNA.processing.plastidial RNA.RNE Complex.RHON1' 'niben101scf01090_662787-666475' '(at1g06190 : 160.0) Rho termination factor; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism, ATP binding; INVOLVED IN: ATP biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757); BEST Arabidopsis thaliana protein match is: ATP binding;ATPases, coupled to transmembrane movement of ions, phosphorylative mechanism (TAIR:AT2G31150.1); Has 63 Blast hits to 63 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 0; Plants - 41; Viruses - 3; Other Eukaryotes - 4 (source: NCBI BLink). & (q8l4e7|bp73_orysa : 145.0) SAP-like protein BP-73 (OsBP-73) (Riaa1) - Oryza sativa (Rice) & (reliability: 320.0) & (original description: Putative RHON1, Description = Rho termination factor, putative, PFAM = PF07498)' T '27.1.10.1.2' 'RNA.processing.plastidial RNA.RNE Complex.RHON1' 'niben101scf02243_602197-606950' '(at1g06190 : 168.0) Rho termination factor; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism, ATP binding; INVOLVED IN: ATP biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757); BEST Arabidopsis thaliana protein match is: ATP binding;ATPases, coupled to transmembrane movement of ions, phosphorylative mechanism (TAIR:AT2G31150.1); Has 63 Blast hits to 63 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 0; Plants - 41; Viruses - 3; Other Eukaryotes - 4 (source: NCBI BLink). & (q8l4e7|bp73_orysa : 144.0) SAP-like protein BP-73 (OsBP-73) (Riaa1) - Oryza sativa (Rice) & (reliability: 336.0) & (original description: Putative RHON1, Description = Rho-N domain-containing protein 1, chloroplastic, PFAM = PF07498)' T '27.1.10.2' 'RNA.processing.plastidial RNA.splicing' '' '' '27.1.10.2.1' 'RNA.processing.plastidial RNA.splicing.CAF1' '' '' '27.1.10.2.2' 'RNA.processing.plastidial RNA.splicing.CAF2' 'niben044scf00033197ctg014_6683-13447' '(at1g23400 : 536.0) Promotes the splicing of chloroplast group II introns.; CAF2; FUNCTIONS IN: RNA binding; INVOLVED IN: Group II intron splicing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain-containing protein (TAIR:AT2G20020.1); Has 265 Blast hits to 223 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 261; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|85815 : 84.0) no description available & (reliability: 1072.0) & (original description: Putative At1g23400, Description = CRS2-associated factor 2, chloroplastic, PFAM = PF01985;PF01985)' T '27.1.10.2.2' 'RNA.processing.plastidial RNA.splicing.CAF2' 'niben101scf01693_79867-86740' '(at1g23400 : 546.0) Promotes the splicing of chloroplast group II introns.; CAF2; FUNCTIONS IN: RNA binding; INVOLVED IN: Group II intron splicing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain-containing protein (TAIR:AT2G20020.1); Has 265 Blast hits to 223 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 261; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|85815 : 83.7) no description available & (reliability: 1092.0) & (original description: Putative At1g23400, Description = CRS2-associated factor 2, chloroplastic, PFAM = PF01985;PF01985)' T '27.1.19' 'RNA.processing.ribonucleases' 'nbv0.3scaffold2265_24503-27543' '(at1g75660 : 132.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (p23252|cr2_horvu : 94.7) Cold-regulated protein 2 (Fragment) - Hordeum vulgare (Barley) & (reliability: 264.0) & (original description: Putative XRN3, Description = 5'-3' exoribonuclease 3, PFAM = )' T '27.1.19' 'RNA.processing.ribonucleases' 'nbv0.3scaffold15073_15387-31918' '(at5g25800 : 702.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: small RNA degrading nuclease 1 (TAIR:AT3G50100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37459 : 255.0) no description available & (gnl|cdd|47785 : 110.0) no description available & (reliability: 1404.0) & (original description: Putative SDN5, Description = Small RNA degrading nuclease 5, PFAM = PF00929)' T '27.1.19' 'RNA.processing.ribonucleases' 'nbv0.3scaffold15124_34359-39360' '(at3g46210 : 206.0) Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G07110.1). & (gnl|cdd|36287 : 143.0) no description available & (reliability: 412.0) & (original description: Putative RRP46, Description = Exosome complex exonuclease RRP46 homolog, PFAM = PF01138)' T '27.1.19' 'RNA.processing.ribonucleases' 'nbv0.3scaffold21458_21032-28794' '(at3g01410 : 263.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease H activity, nuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT1G24090.1); Has 3179 Blast hits to 3179 proteins in 588 species: Archae - 77; Bacteria - 1109; Metazoa - 13; Fungi - 0; Plants - 1505; Viruses - 0; Other Eukaryotes - 475 (source: NCBI BLink). & (gnl|cdd|82165 : 118.0) no description available & (reliability: 526.0) & (original description: Putative rnhA, Description = Ribonuclease H1, N-terminal, PFAM = PF13456)' T '27.1.19' 'RNA.processing.ribonucleases' 'nbv0.3scaffold35440_14231-21839' '(at1g24090 : 306.0) RNase H family protein; FUNCTIONS IN: ribonuclease H activity, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT5G51080.2); Has 3412 Blast hits to 3412 proteins in 738 species: Archae - 71; Bacteria - 1533; Metazoa - 7; Fungi - 2; Plants - 1270; Viruses - 0; Other Eukaryotes - 529 (source: NCBI BLink). & (gnl|cdd|82165 : 113.0) no description available & (reliability: 612.0) & (original description: Putative At1g24090, Description = RNase H domain-containing protein, PFAM = PF13456)' T '27.1.19' 'RNA.processing.ribonucleases' 'nbv0.3scaffold36373_1536-6116' '(at3g46210 : 186.0) Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G07110.1). & (gnl|cdd|36287 : 110.0) no description available & (reliability: 372.0) & (original description: Putative RRP46, Description = Exosome complex exonuclease RRP46 homolog, PFAM = )' T '27.1.19' 'RNA.processing.ribonucleases' 'nbv0.3scaffold44203_1-4548' '(at2g39780 : 169.0) S-like ribonuclease; ribonuclease 2 (RNS2); FUNCTIONS IN: ribonuclease T2 activity, endoribonuclease activity, RNA binding; INVOLVED IN: aging; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568), Ribonuclease T2, active site (InterPro:IPR018188); BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36855 : 100.0) no description available & (gnl|cdd|84778 : 81.1) no description available & (reliability: 338.0) & (original description: Putative ngr2, Description = Ribonuclease 2, PFAM = PF00445)' T '27.1.19' 'RNA.processing.ribonucleases' 'nbv0.3scaffold46444_7360-19750' '(at3g60500 : 413.0) Encodes a 3'-5' exoribonuclease, positively regulates CER3 transcription, involved in cuticular wax biosynthesis.; ECERIFERUM 7 (CER7); CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: ribonuclease PH45A (TAIR:AT3G12990.3). & (gnl|cdd|36827 : 334.0) no description available & (gnl|cdd|32306 : 234.0) no description available & (reliability: 826.0) & (original description: Putative RRP45B, Description = Exosome complex component RRP45B, PFAM = PF03725;PF01138)' T '27.1.19' 'RNA.processing.ribonucleases' 'nbv0.3scaffold55078_3427-11396' '(at2g25100 : 422.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease H activity, RNA binding, catalytic activity, nucleic acid binding; INVOLVED IN: RNA metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit A (InterPro:IPR004649), Ribonuclease HII/HIII (InterPro:IPR001352), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); Has 6305 Blast hits to 6298 proteins in 2456 species: Archae - 256; Bacteria - 4469; Metazoa - 152; Fungi - 137; Plants - 56; Viruses - 3; Other Eukaryotes - 1232 (source: NCBI BLink). & (gnl|cdd|37510 : 345.0) no description available & (gnl|cdd|85400 : 163.0) no description available & (reliability: 844.0) & (original description: Putative rnh2, Description = Ribonuclease, PFAM = PF01351)' T '27.1.19' 'RNA.processing.ribonucleases' 'nbv0.3scaffold58196_1-12172' '(at1g55140 : 229.0) Ribonuclease III family protein; FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT3G13740.1); Has 289 Blast hits to 288 proteins in 138 species: Archae - 0; Bacteria - 238; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|32122 : 89.2) no description available & (reliability: 458.0) & (original description: Putative mrnC, Description = Mini-ribonuclease 3, PFAM = PF00636)' T '27.1.19' 'RNA.processing.ribonucleases' 'nbv0.3scaffold63263_2604-5473' '(at3g44260 : 365.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: response to biotic stimulus, response to wounding, RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT5G22250.1); Has 907 Blast hits to 905 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 261; Fungi - 149; Plants - 375; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|35525 : 327.0) no description available & (gnl|cdd|86737 : 253.0) no description available & (reliability: 730.0) & (original description: Putative CAF1, Description = Ribonuclease CAF1, PFAM = PF04857)' T '27.1.19' 'RNA.processing.ribonucleases' 'nbv0.5scaffold380_50563-59630' '(at1g24090 : 292.0) RNase H family protein; FUNCTIONS IN: ribonuclease H activity, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT5G51080.2); Has 3412 Blast hits to 3412 proteins in 738 species: Archae - 71; Bacteria - 1533; Metazoa - 7; Fungi - 2; Plants - 1270; Viruses - 0; Other Eukaryotes - 529 (source: NCBI BLink). & (gnl|cdd|82165 : 116.0) no description available & (reliability: 584.0) & (original description: Putative rnhA, Description = Ribonuclease H1, N-terminal, PFAM = PF13456)' T '27.1.19' 'RNA.processing.ribonucleases' 'nbv0.5scaffold877_539847-542872' '(at3g44260 : 352.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: response to biotic stimulus, response to wounding, RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT5G22250.1); Has 907 Blast hits to 905 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 261; Fungi - 149; Plants - 375; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|35525 : 312.0) no description available & (gnl|cdd|86737 : 238.0) no description available & (reliability: 704.0) & (original description: Putative CAF1, Description = Ribonuclease CAF1, PFAM = PF04857)' T '27.1.19' 'RNA.processing.ribonucleases' 'nbv0.5scaffold1699_277110-284042' '(at2g43190 : 230.0) ribonuclease P family protein; FUNCTIONS IN: ribonuclease activity, ribonuclease P activity, RNA binding; INVOLVED IN: tRNA processing, mRNA cleavage, rRNA processing; LOCATED IN: ribonuclease P complex, nucleolar ribonuclease P complex, ribonuclease MRP complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease P/MRP, subunit p29, eukaryotic/archaeal (InterPro:IPR002730), Ribonuclease P/MRP, p29 subunit, eukaryotic (InterPro:IPR016848). & (gnl|cdd|39249 : 89.3) no description available & (reliability: 460.0) & (original description: Putative IDP843, Description = Ribonuclease P protein subunit p29, PFAM = PF01868)' T '27.1.19' 'RNA.processing.ribonucleases' 'nbv0.5scaffold2103_337275-347509' '(at1g24090 : 266.0) RNase H family protein; FUNCTIONS IN: ribonuclease H activity, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT5G51080.2); Has 3412 Blast hits to 3412 proteins in 738 species: Archae - 71; Bacteria - 1533; Metazoa - 7; Fungi - 2; Plants - 1270; Viruses - 0; Other Eukaryotes - 529 (source: NCBI BLink). & (gnl|cdd|82165 : 116.0) no description available & (reliability: 532.0) & (original description: Putative Sb07g023590, Description = Putative uncharacterized protein Sb07g023590, PFAM = PF13456)' T '27.1.19' 'RNA.processing.ribonucleases' 'nbv0.5scaffold2184_66099-77725' '(at2g43190 : 224.0) ribonuclease P family protein; FUNCTIONS IN: ribonuclease activity, ribonuclease P activity, RNA binding; INVOLVED IN: tRNA processing, mRNA cleavage, rRNA processing; LOCATED IN: ribonuclease P complex, nucleolar ribonuclease P complex, ribonuclease MRP complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease P/MRP, subunit p29, eukaryotic/archaeal (InterPro:IPR002730), Ribonuclease P/MRP, p29 subunit, eukaryotic (InterPro:IPR016848). & (gnl|cdd|39249 : 88.2) no description available & (reliability: 448.0) & (original description: Putative Sb09g023150, Description = Putative uncharacterized protein Sb09g023150, PFAM = PF01868)' T '27.1.19' 'RNA.processing.ribonucleases' 'nbv0.5scaffold4182_170248-201823' '(at1g16800 : 657.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G30100.1); Has 9771 Blast hits to 8579 proteins in 1344 species: Archae - 197; Bacteria - 2032; Metazoa - 2727; Fungi - 1277; Plants - 815; Viruses - 364; Other Eukaryotes - 2359 (source: NCBI BLink). & (gnl|cdd|37012 : 248.0) no description available & (gnl|cdd|31309 : 205.0) no description available & (reliability: 1314.0) & (original description: Putative F383_11301, Description = Putative helicase senataxin, PFAM = PF13086;PF13087;PF12726)' T '27.1.19' 'RNA.processing.ribonucleases' 'nbv0.5scaffold4267_340564-350499' '(at4g15417 : 94.0) RNAse II-like 1 (RTL1); FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 2 (TAIR:AT3G20420.1); Has 6428 Blast hits to 6386 proteins in 2315 species: Archae - 23; Bacteria - 4325; Metazoa - 271; Fungi - 247; Plants - 236; Viruses - 14; Other Eukaryotes - 1312 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative RTL1, Description = Ribonuclease III domain-containing protein, PFAM = PF00636)' T '27.1.19' 'RNA.processing.ribonucleases' 'nbv0.5scaffold4591_34577-46416' '(at3g46210 : 372.0) Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G07110.1). & (gnl|cdd|36287 : 233.0) no description available & (gnl|cdd|31033 : 108.0) no description available & (reliability: 744.0) & (original description: Putative RRP46, Description = Exosome complex exonuclease RRP46 homolog, PFAM = PF01138)' T '27.1.19' 'RNA.processing.ribonucleases' 'nbv0.5scaffold4712_110626-121295' '(at3g01410 : 158.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease H activity, nuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT1G24090.1); Has 3179 Blast hits to 3179 proteins in 588 species: Archae - 77; Bacteria - 1109; Metazoa - 13; Fungi - 0; Plants - 1505; Viruses - 0; Other Eukaryotes - 475 (source: NCBI BLink). & (gnl|cdd|82165 : 108.0) no description available & (reliability: 316.0) & (original description: Putative rnhA, Description = Ribonuclease H1, N-terminal, PFAM = PF13456)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00000117ctg010_8289-10603' '(at4g37510 : 193.0) Ribonuclease III family protein; FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G48121.2); Has 794 Blast hits to 789 proteins in 319 species: Archae - 0; Bacteria - 574; Metazoa - 0; Fungi - 39; Plants - 42; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (reliability: 386.0) & (original description: Putative CYC1, Description = Chloroplast ribonuclease III domain protein, PFAM = )' T '27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00000117ctg013_546-6465' '(at4g37510 : 617.0) Ribonuclease III family protein; FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G48121.2); Has 794 Blast hits to 789 proteins in 319 species: Archae - 0; Bacteria - 574; Metazoa - 0; Fungi - 39; Plants - 42; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (gnl|cdd|29697 : 93.4) no description available & (reliability: 1234.0) & (original description: Putative CYC1, Description = Chloroplast ribonuclease III domain protein, PFAM = )' T '27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00007030ctg016_666-7808' '(at1g55870 : 705.0) Encodes a poly(A)-specific ribonuclease, AtPARN. Expression of AtPARN is upregulated by ABA or stress treatment. Mutant is hypersensitivity to salicylic acid as well as ABA.; ABA-HYPERSENSITIVE GERMINATION 2 (AHG2); FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: response to abscisic acid stimulus, RNA modification, response to stress, response to salicylic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G25430.1); Has 352 Blast hits to 351 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 63; Plants - 63; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (gnl|cdd|37201 : 198.0) no description available & (gnl|cdd|86737 : 103.0) no description available & (reliability: 1410.0) & (original description: Putative PARN, Description = Poly(A)-specific ribonuclease PARN, PFAM = PF04857)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00008124ctg001_22169-25866' '(at2g02990 : 317.0) member of the ribonuclease T2 family, responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid.; ribonuclease 1 (RNS1); FUNCTIONS IN: ribonuclease activity, endoribonuclease activity; INVOLVED IN: cellular response to phosphate starvation, aging, response to wounding, anthocyanin biosynthetic process; LOCATED IN: extracellular region, cell wall, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568), Ribonuclease T2, active site (InterPro:IPR018188); BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1); Has 2632 Blast hits to 2631 proteins in 514 species: Archae - 0; Bacteria - 441; Metazoa - 304; Fungi - 244; Plants - 1533; Viruses - 7; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|84778 : 249.0) no description available & (gnl|cdd|36855 : 247.0) no description available & (p83618|rn28_pangi : 111.0) Ribonuclease-like storage protein precursor (Root 28 kDa major protein) - Panax ginseng (Korean ginseng) & (reliability: 634.0) & (original description: Putative ngr1, Description = Ribonuclease NW, PFAM = PF00445)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00010077ctg000_12730-24314' '(at5g02250 : 556.0) Encodes a exoribonuclease involved in rRNA processing in mitochondria and chloroplasts.Loss of function mutations are pale green and require supplementation with sucrose for germination and early development. Plants are pale green due to defects in chloroplast biogenesis.; EMBRYO DEFECTIVE 2730 (EMB2730); FUNCTIONS IN: ribonuclease activity, 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: chloroplast organization, rRNA processing, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease II/R (InterPro:IPR001900); BEST Arabidopsis thaliana protein match is: ribonuclease II family protein (TAIR:AT2G17510.1); Has 7586 Blast hits to 7556 proteins in 2301 species: Archae - 41; Bacteria - 5322; Metazoa - 356; Fungi - 403; Plants - 125; Viruses - 2; Other Eukaryotes - 1337 (source: NCBI BLink). & (gnl|cdd|37313 : 260.0) no description available & (gnl|cdd|85019 : 252.0) no description available & (reliability: 1112.0) & (original description: Putative rnb, Description = Exoribonuclease II, PFAM = PF00773)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00010357ctg005_1-3136' '(at3g20420 : 166.0) double-stranded RNA binding / ribonuclease III. Required for 3' external transcribed spacer (ETS) cleavage of the pre-rRNA in vivo. Localizes in the nucleus and cytoplasm.; RNAse THREE-like protein 2 (RTL2); FUNCTIONS IN: double-stranded RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 3 (TAIR:AT5G45150.1); Has 7842 Blast hits to 7448 proteins in 2591 species: Archae - 23; Bacteria - 4871; Metazoa - 597; Fungi - 359; Plants - 331; Viruses - 17; Other Eukaryotes - 1644 (source: NCBI BLink). & (gnl|cdd|29697 : 121.0) no description available & (gnl|cdd|35920 : 92.0) no description available & (reliability: 332.0) & (original description: Putative ASU1, Description = Ribonuclease 3-like protein 2, PFAM = PF00636)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00012369ctg011_2713-8620' '(gnl|cdd|37255 : 477.0) no description available & (gnl|cdd|66810 : 388.0) no description available & (at1g75660 : 378.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (reliability: 756.0) & (original description: Putative xrn2, Description = 5'-3' exoribonuclease 2, PFAM = PF03159)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00012369ctg013_886-9138' '(at1g75660 : 411.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (gnl|cdd|37255 : 299.0) no description available & (gnl|cdd|34654 : 171.0) no description available & (reliability: 822.0) & (original description: Putative rat1, Description = 5'-3' exoribonuclease 2, PFAM = PF00098)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00012621ctg013_20196-30694' '(at1g24090 : 271.0) RNase H family protein; FUNCTIONS IN: ribonuclease H activity, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT5G51080.2); Has 3412 Blast hits to 3412 proteins in 738 species: Archae - 71; Bacteria - 1533; Metazoa - 7; Fungi - 2; Plants - 1270; Viruses - 0; Other Eukaryotes - 529 (source: NCBI BLink). & (gnl|cdd|82165 : 118.0) no description available & (reliability: 542.0) & (original description: Putative rnhA, Description = Ribonuclease H1, N-terminal, PFAM = PF13456)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00020203ctg002_9458-11179' '(at4g15417 : 105.0) RNAse II-like 1 (RTL1); FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 2 (TAIR:AT3G20420.1); Has 6428 Blast hits to 6386 proteins in 2315 species: Archae - 23; Bacteria - 4325; Metazoa - 271; Fungi - 247; Plants - 236; Viruses - 14; Other Eukaryotes - 1312 (source: NCBI BLink). & (gnl|cdd|30916 : 94.9) no description available & (reliability: 210.0) & (original description: Putative DCL3, Description = Ribonuclease III domain protein, PFAM = PF14622)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00020710ctg004_14475-17699' '(at3g44260 : 401.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: response to biotic stimulus, response to wounding, RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT5G22250.1); Has 907 Blast hits to 905 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 261; Fungi - 149; Plants - 375; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|35525 : 341.0) no description available & (gnl|cdd|86737 : 271.0) no description available & (reliability: 802.0) & (original description: Putative CAF1, Description = Ribonuclease CAF1, PFAM = PF04857)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00026063ctg002_3859-15257' '(at2g43190 : 119.0) ribonuclease P family protein; FUNCTIONS IN: ribonuclease activity, ribonuclease P activity, RNA binding; INVOLVED IN: tRNA processing, mRNA cleavage, rRNA processing; LOCATED IN: ribonuclease P complex, nucleolar ribonuclease P complex, ribonuclease MRP complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease P/MRP, subunit p29, eukaryotic/archaeal (InterPro:IPR002730), Ribonuclease P/MRP, p29 subunit, eukaryotic (InterPro:IPR016848). & (reliability: 238.0) & (original description: Putative At2g43190, Description = Ribonuclease P protein subunit p29, PFAM = PF01868)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00034361ctg000_10223-14384' '(at3g07750 : 397.0) 3'-5'-exoribonuclease family protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: ribonuclease PH45A (TAIR:AT3G12990.3); Has 1494 Blast hits to 1492 proteins in 343 species: Archae - 295; Bacteria - 54; Metazoa - 354; Fungi - 315; Plants - 185; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (gnl|cdd|36825 : 279.0) no description available & (gnl|cdd|32306 : 194.0) no description available & (reliability: 794.0) & (original description: Putative EXOSC7, Description = Exosome complex component RRP42, PFAM = PF01138;PF03725)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben044scf00052242ctg000_1447-11133' '(at1g31500 : 459.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G31530.1); Has 1261 Blast hits to 1240 proteins in 208 species: Archae - 0; Bacteria - 12; Metazoa - 523; Fungi - 244; Plants - 247; Viruses - 0; Other Eukaryotes - 235 (source: NCBI BLink). & (gnl|cdd|35839 : 214.0) no description available & (gnl|cdd|34836 : 162.0) no description available & (reliability: 918.0) & (original description: Putative CCR4-4, Description = Carbon catabolite repressor protein 4 homolog 4, PFAM = PF03372)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf00229_541345-557961' '(at5g02250 : 560.0) Encodes a exoribonuclease involved in rRNA processing in mitochondria and chloroplasts.Loss of function mutations are pale green and require supplementation with sucrose for germination and early development. Plants are pale green due to defects in chloroplast biogenesis.; EMBRYO DEFECTIVE 2730 (EMB2730); FUNCTIONS IN: ribonuclease activity, 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: chloroplast organization, rRNA processing, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease II/R (InterPro:IPR001900); BEST Arabidopsis thaliana protein match is: ribonuclease II family protein (TAIR:AT2G17510.1); Has 7586 Blast hits to 7556 proteins in 2301 species: Archae - 41; Bacteria - 5322; Metazoa - 356; Fungi - 403; Plants - 125; Viruses - 2; Other Eukaryotes - 1337 (source: NCBI BLink). & (gnl|cdd|37313 : 253.0) no description available & (gnl|cdd|85019 : 249.0) no description available & (reliability: 1120.0) & (original description: Putative RNR1, Description = Ribonuclease II, chloroplastic/mitochondrial, PFAM = PF00773)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf00661_118233-135861' '(at1g24090 : 308.0) RNase H family protein; FUNCTIONS IN: ribonuclease H activity, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT5G51080.2); Has 3412 Blast hits to 3412 proteins in 738 species: Archae - 71; Bacteria - 1533; Metazoa - 7; Fungi - 2; Plants - 1270; Viruses - 0; Other Eukaryotes - 529 (source: NCBI BLink). & (gnl|cdd|82165 : 113.0) no description available & (reliability: 616.0) & (original description: Putative Sb09g000480, Description = Putative uncharacterized protein Sb09g000480, PFAM = PF13456)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf01037_465270-474796' '(at4g15417 : 211.0) RNAse II-like 1 (RTL1); FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 2 (TAIR:AT3G20420.1); Has 6428 Blast hits to 6386 proteins in 2315 species: Archae - 23; Bacteria - 4325; Metazoa - 271; Fungi - 247; Plants - 236; Viruses - 14; Other Eukaryotes - 1312 (source: NCBI BLink). & (gnl|cdd|80512 : 137.0) no description available & (gnl|cdd|35920 : 92.8) no description available & (reliability: 422.0) & (original description: Putative RTL1, Description = Ribonuclease 3-like protein 3, PFAM = PF00636)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf01037_544646-551560' '(at4g15417 : 210.0) RNAse II-like 1 (RTL1); FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 2 (TAIR:AT3G20420.1); Has 6428 Blast hits to 6386 proteins in 2315 species: Archae - 23; Bacteria - 4325; Metazoa - 271; Fungi - 247; Plants - 236; Viruses - 14; Other Eukaryotes - 1312 (source: NCBI BLink). & (gnl|cdd|30916 : 162.0) no description available & (gnl|cdd|35920 : 91.2) no description available & (reliability: 420.0) & (original description: Putative Os06g0358800, Description = Ribonuclease 3-like protein 3, PFAM = PF00035;PF00636)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf01148_179672-187068' '(at2g39780 : 288.0) S-like ribonuclease; ribonuclease 2 (RNS2); FUNCTIONS IN: ribonuclease T2 activity, endoribonuclease activity, RNA binding; INVOLVED IN: aging; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568), Ribonuclease T2, active site (InterPro:IPR018188); BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36855 : 176.0) no description available & (gnl|cdd|84778 : 153.0) no description available & (reliability: 576.0) & (original description: Putative ngr2, Description = Ribonuclease 2, PFAM = PF00445)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf01300_127083-141435' '(at3g01410 : 266.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease H activity, nuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT1G24090.1); Has 3179 Blast hits to 3179 proteins in 588 species: Archae - 77; Bacteria - 1109; Metazoa - 13; Fungi - 0; Plants - 1505; Viruses - 0; Other Eukaryotes - 475 (source: NCBI BLink). & (gnl|cdd|82165 : 120.0) no description available & (reliability: 532.0) & (original description: Putative rnhA, Description = Ribonuclease H1, N-terminal, PFAM = PF13456)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf01372_553298-556170' '(at3g44260 : 363.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: response to biotic stimulus, response to wounding, RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT5G22250.1); Has 907 Blast hits to 905 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 261; Fungi - 149; Plants - 375; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|35525 : 325.0) no description available & (gnl|cdd|86737 : 252.0) no description available & (reliability: 726.0) & (original description: Putative CAF1, Description = Ribonuclease CAF1, PFAM = PF04857)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf01702_397034-425620' '(at1g75660 : 1205.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (gnl|cdd|37255 : 1063.0) no description available & (gnl|cdd|34654 : 700.0) no description available & (p23252|cr2_horvu : 94.4) Cold-regulated protein 2 (Fragment) - Hordeum vulgare (Barley) & (reliability: 2410.0) & (original description: Putative XRN3, Description = 5'-3' exoribonuclease 3, PFAM = PF03159;PF00098)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf01702_399308-401753' '(at1g75660 : 114.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (gnl|cdd|37255 : 98.5) no description available & (reliability: 228.0) & (original description: Putative AIN1, Description = 5'-3' exoribonuclease 4, PFAM = )' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf01706_39249-54510' '(at3g46210 : 387.0) Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G07110.1). & (gnl|cdd|36287 : 247.0) no description available & (gnl|cdd|31033 : 119.0) no description available & (reliability: 774.0) & (original description: Putative RRP46, Description = Exosome complex exonuclease RRP46 homolog, PFAM = PF01138)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf01750_1621314-1626255' '(at5g22250 : 402.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G44260.1); Has 907 Blast hits to 897 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 254; Fungi - 150; Plants - 381; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|35525 : 341.0) no description available & (gnl|cdd|86737 : 270.0) no description available & (reliability: 804.0) & (original description: Putative CAF1, Description = Ribonuclease CAF1, PFAM = PF04857)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf01752_314684-321699' '(at3g20420 : 310.0) double-stranded RNA binding / ribonuclease III. Required for 3' external transcribed spacer (ETS) cleavage of the pre-rRNA in vivo. Localizes in the nucleus and cytoplasm.; RNAse THREE-like protein 2 (RTL2); FUNCTIONS IN: double-stranded RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 3 (TAIR:AT5G45150.1); Has 7842 Blast hits to 7448 proteins in 2591 species: Archae - 23; Bacteria - 4871; Metazoa - 597; Fungi - 359; Plants - 331; Viruses - 17; Other Eukaryotes - 1644 (source: NCBI BLink). & (gnl|cdd|29697 : 128.0) no description available & (gnl|cdd|35920 : 126.0) no description available & (reliability: 620.0) & (original description: Putative RTL2, Description = Ribonuclease 3-like protein 2, PFAM = PF00636;PF00035)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf01808_30347-40055' '(at1g24090 : 271.0) RNase H family protein; FUNCTIONS IN: ribonuclease H activity, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT5G51080.2); Has 3412 Blast hits to 3412 proteins in 738 species: Archae - 71; Bacteria - 1533; Metazoa - 7; Fungi - 2; Plants - 1270; Viruses - 0; Other Eukaryotes - 529 (source: NCBI BLink). & (gnl|cdd|82165 : 118.0) no description available & (reliability: 542.0) & (original description: Putative rnhA, Description = Ribonuclease H1, N-terminal, PFAM = PF13456)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf02132_207374-223967' '(at1g74700 : 409.0) Encodes a protein with RNAse Z activity suggesting a role in tRNA processing.; tRNAse Z1 (TRZ1); BEST Arabidopsis thaliana protein match is: Metallo-hydrolase/oxidoreductase superfamily protein (TAIR:AT2G04530.1); Has 2024 Blast hits to 2024 proteins in 946 species: Archae - 244; Bacteria - 1574; Metazoa - 35; Fungi - 17; Plants - 82; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (p60193|rnzn_wheat : 280.0) Nuclear ribonuclease Z (EC 3.1.26.11) (RNase Z) (tRNase Z) (tRNA 3 endonuclease) (Zinc phosphodiesterase ELAC) (Fragment) - Triticum aestivum (Wheat) & (gnl|cdd|31427 : 90.5) no description available & (reliability: 818.0) & (original description: Putative NUZ, Description = Nuclear ribonuclease Z, PFAM = PF12706)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf02429_712128-758260' '(at1g77680 : 972.0) Ribonuclease II/R family protein; FUNCTIONS IN: ribonuclease activity, RNA binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease II/R (InterPro:IPR001900); BEST Arabidopsis thaliana protein match is: ribonuclease II family protein (TAIR:AT2G17510.1); Has 8235 Blast hits to 8065 proteins in 2328 species: Archae - 43; Bacteria - 5411; Metazoa - 476; Fungi - 391; Plants - 139; Viruses - 2; Other Eukaryotes - 1773 (source: NCBI BLink). & (gnl|cdd|37313 : 490.0) no description available & (gnl|cdd|30903 : 360.0) no description available & (reliability: 1944.0) & (original description: Putative SOV, Description = Inactive exonuclease DIS3L2, PFAM = PF00773)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf02563_661135-665995' '(at1g74700 : 367.0) Encodes a protein with RNAse Z activity suggesting a role in tRNA processing.; tRNAse Z1 (TRZ1); BEST Arabidopsis thaliana protein match is: Metallo-hydrolase/oxidoreductase superfamily protein (TAIR:AT2G04530.1); Has 2024 Blast hits to 2024 proteins in 946 species: Archae - 244; Bacteria - 1574; Metazoa - 35; Fungi - 17; Plants - 82; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (p60193|rnzn_wheat : 257.0) Nuclear ribonuclease Z (EC 3.1.26.11) (RNase Z) (tRNase Z) (tRNA 3 endonuclease) (Zinc phosphodiesterase ELAC) (Fragment) - Triticum aestivum (Wheat) & (gnl|cdd|31427 : 96.7) no description available & (reliability: 734.0) & (original description: Putative NUZ, Description = Nuclear ribonuclease Z, PFAM = PF12706)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf02634_339869-349056' '(at2g25100 : 424.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease H activity, RNA binding, catalytic activity, nucleic acid binding; INVOLVED IN: RNA metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit A (InterPro:IPR004649), Ribonuclease HII/HIII (InterPro:IPR001352), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); Has 6305 Blast hits to 6298 proteins in 2456 species: Archae - 256; Bacteria - 4469; Metazoa - 152; Fungi - 137; Plants - 56; Viruses - 3; Other Eukaryotes - 1232 (source: NCBI BLink). & (gnl|cdd|37510 : 344.0) no description available & (gnl|cdd|85400 : 163.0) no description available & (reliability: 848.0) & (original description: Putative rnhB, Description = Ribonuclease, PFAM = PF01351)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf02699_61837-69060' '(at1g03360 : 402.0) ribosomal RNA processing 4 (RRP4); FUNCTIONS IN: exonuclease activity; LOCATED IN: mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027); Has 615 Blast hits to 615 proteins in 291 species: Archae - 147; Bacteria - 0; Metazoa - 136; Fungi - 134; Plants - 55; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|38223 : 309.0) no description available & (gnl|cdd|31294 : 140.0) no description available & (reliability: 804.0) & (original description: Putative RRP4, Description = Exosome complex component RRP4 homolog, PFAM = PF15985)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf03128_328657-338477' '(at1g75660 : 129.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (p23252|cr2_horvu : 92.0) Cold-regulated protein 2 (Fragment) - Hordeum vulgare (Barley) & (reliability: 258.0) & (original description: Putative XRN3, Description = 5'-3' exoribonuclease 3, PFAM = )' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf03374_680229-685974' '(at3g07750 : 392.0) 3'-5'-exoribonuclease family protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: ribonuclease PH45A (TAIR:AT3G12990.3); Has 1494 Blast hits to 1492 proteins in 343 species: Archae - 295; Bacteria - 54; Metazoa - 354; Fungi - 315; Plants - 185; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (gnl|cdd|36825 : 280.0) no description available & (gnl|cdd|32306 : 193.0) no description available & (reliability: 784.0) & (original description: Putative EXOSC7, Description = Exosome complex component RRP42, PFAM = PF01138;PF03725)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf03747_237810-253556' '(at4g37510 : 808.0) Ribonuclease III family protein; FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G48121.2); Has 794 Blast hits to 789 proteins in 319 species: Archae - 0; Bacteria - 574; Metazoa - 0; Fungi - 39; Plants - 42; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (gnl|cdd|29697 : 90.0) no description available & (reliability: 1616.0) & (original description: Putative RNC1, Description = Ribonuclease III domain-containing protein RNC1, chloroplastic, PFAM = )' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf03918_105583-114976' '(at3g04480 : 889.0) endoribonucleases; FUNCTIONS IN: endoribonuclease activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF71, ATP-binding domain (InterPro:IPR002761), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Endoribonuclease L-PSP (InterPro:IPR006175), Endoribonuclease L-PSP/chorismate mutase-like (InterPro:IPR013813); Has 2752 Blast hits to 2664 proteins in 980 species: Archae - 283; Bacteria - 1591; Metazoa - 282; Fungi - 177; Plants - 40; Viruses - 0; Other Eukaryotes - 379 (source: NCBI BLink). & (gnl|cdd|37527 : 377.0) no description available & (gnl|cdd|30181 : 254.0) no description available & (reliability: 1778.0) & (original description: Putative dph6, Description = Diphthine--ammonia ligase, PFAM = PF01042;PF01042;PF01902)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf04082_145519-148934' '(at2g02990 : 317.0) member of the ribonuclease T2 family, responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid.; ribonuclease 1 (RNS1); FUNCTIONS IN: ribonuclease activity, endoribonuclease activity; INVOLVED IN: cellular response to phosphate starvation, aging, response to wounding, anthocyanin biosynthetic process; LOCATED IN: extracellular region, cell wall, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568), Ribonuclease T2, active site (InterPro:IPR018188); BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1); Has 2632 Blast hits to 2631 proteins in 514 species: Archae - 0; Bacteria - 441; Metazoa - 304; Fungi - 244; Plants - 1533; Viruses - 7; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|84778 : 249.0) no description available & (gnl|cdd|36855 : 248.0) no description available & (p83618|rn28_pangi : 109.0) Ribonuclease-like storage protein precursor (Root 28 kDa major protein) - Panax ginseng (Korean ginseng) & (reliability: 634.0) & (original description: Putative ngr1, Description = Ribonuclease NW, PFAM = PF00445)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf04138_231582-233958' '(at2g40815 : 152.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: C2 calcium-dependent membrane targeting (InterPro:IPR000008); Has 2829 Blast hits to 2399 proteins in 295 species: Archae - 0; Bacteria - 112; Metazoa - 998; Fungi - 464; Plants - 875; Viruses - 39; Other Eukaryotes - 341 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative , Description = , PFAM = PF00168)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf04219_90987-123879' '(at1g16800 : 981.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G30100.1); Has 9771 Blast hits to 8579 proteins in 1344 species: Archae - 197; Bacteria - 2032; Metazoa - 2727; Fungi - 1277; Plants - 815; Viruses - 364; Other Eukaryotes - 2359 (source: NCBI BLink). & (gnl|cdd|37012 : 247.0) no description available & (gnl|cdd|31309 : 204.0) no description available & (reliability: 1962.0) & (original description: Putative TCM_027751, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, putative, PFAM = PF13087;PF13086;PF12726)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf04296_147710-150313' '(at1g24450 : 149.0) NUCLEAR FUSION DEFECTIVE 2 (NFD2); FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); Has 2124 Blast hits to 2124 proteins in 820 species: Archae - 3; Bacteria - 1583; Metazoa - 2; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 509 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative NFD2, Description = Ribonuclease 3 family protein, PFAM = )' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf04339_685933-691086' '(at3g20390 : 219.0) endoribonuclease L-PSP family protein; FUNCTIONS IN: endoribonuclease activity; INVOLVED IN: response to cadmium ion; LOCATED IN: thylakoid, mitochondrion, chloroplast, plastid, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Endoribonuclease L-PSP (InterPro:IPR006175), YjgF-like protein, conserved site (InterPro:IPR019897), Endoribonuclease L-PSP/chorismate mutase-like (InterPro:IPR013813), YjgF-like protein (InterPro:IPR006056); Has 9982 Blast hits to 9763 proteins in 2269 species: Archae - 153; Bacteria - 7551; Metazoa - 243; Fungi - 414; Plants - 68; Viruses - 0; Other Eukaryotes - 1553 (source: NCBI BLink). & (gnl|cdd|37528 : 141.0) no description available & (gnl|cdd|85205 : 141.0) no description available & (reliability: 438.0) & (original description: Putative RIDA, Description = Reactive Intermediate Deaminase A, chloroplastic, PFAM = PF01042)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf04418_1102505-1114303' '(at2g39780 : 292.0) S-like ribonuclease; ribonuclease 2 (RNS2); FUNCTIONS IN: ribonuclease T2 activity, endoribonuclease activity, RNA binding; INVOLVED IN: aging; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568), Ribonuclease T2, active site (InterPro:IPR018188); BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36855 : 208.0) no description available & (gnl|cdd|84778 : 186.0) no description available & (reliability: 584.0) & (original description: Putative sl28, Description = S-like RNase, PFAM = PF00445)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf04473_1432257-1442283' '(at2g40820 : 545.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT3G56480.1); Has 203 Blast hits to 195 proteins in 64 species: Archae - 3; Bacteria - 13; Metazoa - 26; Fungi - 15; Plants - 101; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 1090.0) & (original description: Putative SCAB3, Description = Stomatal closure-related actin-binding protein 3, PFAM = PF16709;PF16712;PF16711)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf04626_203283-210784' '(at3g01410 : 247.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease H activity, nuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT1G24090.1); Has 3179 Blast hits to 3179 proteins in 588 species: Archae - 77; Bacteria - 1109; Metazoa - 13; Fungi - 0; Plants - 1505; Viruses - 0; Other Eukaryotes - 475 (source: NCBI BLink). & (gnl|cdd|82165 : 106.0) no description available & (reliability: 494.0) & (original description: Putative rnhA, Description = Ribonuclease H1, N-terminal, PFAM = PF13456)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf05157_514328-516861' '(at2g02990 : 82.0) member of the ribonuclease T2 family, responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid.; ribonuclease 1 (RNS1); FUNCTIONS IN: ribonuclease activity, endoribonuclease activity; INVOLVED IN: cellular response to phosphate starvation, aging, response to wounding, anthocyanin biosynthetic process; LOCATED IN: extracellular region, cell wall, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568), Ribonuclease T2, active site (InterPro:IPR018188); BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1); Has 2632 Blast hits to 2631 proteins in 514 species: Archae - 0; Bacteria - 441; Metazoa - 304; Fungi - 244; Plants - 1533; Viruses - 7; Other Eukaryotes - 103 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative ngr3, Description = Ribonuclease T2 family protein, PFAM = PF00445)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf05407_105809-112880' '(at3g25430 : 572.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: RNA modification; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT1G55870.1); Has 339 Blast hits to 335 proteins in 120 species: Archae - 0; Bacteria - 10; Metazoa - 154; Fungi - 41; Plants - 69; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|37201 : 147.0) no description available & (gnl|cdd|86737 : 86.1) no description available & (reliability: 1144.0) & (original description: Putative At3g25430, Description = Poly(A)-specific ribonuclease PARN-like, PFAM = PF04857)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf05712_347574-350921' '(at2g02990 : 317.0) member of the ribonuclease T2 family, responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid.; ribonuclease 1 (RNS1); FUNCTIONS IN: ribonuclease activity, endoribonuclease activity; INVOLVED IN: cellular response to phosphate starvation, aging, response to wounding, anthocyanin biosynthetic process; LOCATED IN: extracellular region, cell wall, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568), Ribonuclease T2, active site (InterPro:IPR018188); BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1); Has 2632 Blast hits to 2631 proteins in 514 species: Archae - 0; Bacteria - 441; Metazoa - 304; Fungi - 244; Plants - 1533; Viruses - 7; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|84778 : 249.0) no description available & (gnl|cdd|36855 : 248.0) no description available & (p83618|rn28_pangi : 110.0) Ribonuclease-like storage protein precursor (Root 28 kDa major protein) - Panax ginseng (Korean ginseng) & (reliability: 634.0) & (original description: Putative ngr1, Description = Ribonuclease NW, PFAM = PF00445)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf06045_52306-97695' '(at1g55140 : 239.0) Ribonuclease III family protein; FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT3G13740.1); Has 289 Blast hits to 288 proteins in 138 species: Archae - 0; Bacteria - 238; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|32122 : 89.6) no description available & (reliability: 478.0) & (original description: Putative mrnC, Description = Mini-ribonuclease 3, PFAM = PF00636)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf06045_69351-83700' '(at1g55140 : 122.0) Ribonuclease III family protein; FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT3G13740.1); Has 289 Blast hits to 288 proteins in 138 species: Archae - 0; Bacteria - 238; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative pco123324, Description = RNA binding protein, putative, PFAM = )' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf06482_114608-128084' '(at5g02250 : 922.0) Encodes a exoribonuclease involved in rRNA processing in mitochondria and chloroplasts.Loss of function mutations are pale green and require supplementation with sucrose for germination and early development. Plants are pale green due to defects in chloroplast biogenesis.; EMBRYO DEFECTIVE 2730 (EMB2730); FUNCTIONS IN: ribonuclease activity, 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: chloroplast organization, rRNA processing, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease II/R (InterPro:IPR001900); BEST Arabidopsis thaliana protein match is: ribonuclease II family protein (TAIR:AT2G17510.1); Has 7586 Blast hits to 7556 proteins in 2301 species: Archae - 41; Bacteria - 5322; Metazoa - 356; Fungi - 403; Plants - 125; Viruses - 2; Other Eukaryotes - 1337 (source: NCBI BLink). & (gnl|cdd|37313 : 288.0) no description available & (gnl|cdd|30903 : 264.0) no description available & (reliability: 1844.0) & (original description: Putative RNR1, Description = Ribonuclease II, chloroplastic/mitochondrial, PFAM = PF00773)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf06590_129947-139277' '(at5g59980 : 406.0) Polymerase/histidinol phosphatase-like; FUNCTIONS IN: tRNA-intron endonuclease activity, ribonuclease activity, catalytic activity; INVOLVED IN: tRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: trichome; CONTAINS InterPro DOMAIN/s: Polymerase/histidinol phosphatase-like (InterPro:IPR016195), RNase P subunit p30 (InterPro:IPR002738); Has 1908 Blast hits to 1535 proteins in 339 species: Archae - 16; Bacteria - 381; Metazoa - 491; Fungi - 307; Plants - 100; Viruses - 13; Other Eukaryotes - 600 (source: NCBI BLink). & (gnl|cdd|37574 : 140.0) no description available & (gnl|cdd|85737 : 133.0) no description available & (reliability: 812.0) & (original description: Putative RPP30, Description = Ribonuclease P protein subunit p30, PFAM = PF01876)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf06725_278115-287253' '(at1g55870 : 696.0) Encodes a poly(A)-specific ribonuclease, AtPARN. Expression of AtPARN is upregulated by ABA or stress treatment. Mutant is hypersensitivity to salicylic acid as well as ABA.; ABA-HYPERSENSITIVE GERMINATION 2 (AHG2); FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: response to abscisic acid stimulus, RNA modification, response to stress, response to salicylic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G25430.1); Has 352 Blast hits to 351 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 63; Plants - 63; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (gnl|cdd|37201 : 198.0) no description available & (gnl|cdd|86737 : 104.0) no description available & (reliability: 1392.0) & (original description: Putative PARN, Description = Poly(A)-specific ribonuclease PARN, PFAM = PF04857)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf06738_287772-294296' '(at1g60080 : 388.0) 3'-5'-exoribonuclease family protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: ribonuclease PH45A (TAIR:AT3G12990.3); Has 1508 Blast hits to 1508 proteins in 331 species: Archae - 402; Bacteria - 40; Metazoa - 363; Fungi - 232; Plants - 181; Viruses - 0; Other Eukaryotes - 290 (source: NCBI BLink). & (gnl|cdd|36826 : 327.0) no description available & (gnl|cdd|32306 : 172.0) no description available & (reliability: 776.0) & (original description: Putative BnaCnng31490D, Description = BnaCnng31490D protein, PFAM = PF03725;PF01138)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf06976_293711-296535' '(at1g80780 : 455.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT2G32070.1). & (gnl|cdd|35525 : 381.0) no description available & (gnl|cdd|86737 : 295.0) no description available & (reliability: 910.0) & (original description: Putative caf1, Description = CCR4-NOT transcription complex subunit 7, PFAM = PF04857;PF04857)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf07152_543763-550805' '(at2g04530 : 431.0) Encodes a protein with RNAse Z activity suggesting a role in tRNA processing. Protein contains a signal sequence for import into the chloroplast.; CPZ; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: tRNAse Z1 (TAIR:AT1G74700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p60193|rnzn_wheat : 239.0) Nuclear ribonuclease Z (EC 3.1.26.11) (RNase Z) (tRNase Z) (tRNA 3 endonuclease) (Zinc phosphodiesterase ELAC) (Fragment) - Triticum aestivum (Wheat) & (gnl|cdd|31427 : 97.0) no description available & (reliability: 862.0) & (original description: Putative CPZ, Description = Ribonuclease Z, chloroplastic, PFAM = PF12706)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf07474_99503-118871' '(at5g25800 : 623.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: small RNA degrading nuclease 1 (TAIR:AT3G50100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37459 : 224.0) no description available & (gnl|cdd|47785 : 109.0) no description available & (reliability: 1246.0) & (original description: Putative SDN5, Description = Small RNA degrading nuclease 5, PFAM = PF00929)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf07590_445081-450988' '(at1g54490 : 199.0) Involved in the ethylene response. XRN4 does not appear to regulate ethylene signaling via an RNA-INDUCED SILENCING COMPLEX-based RNA silencing mechanism but acts by independent means. Endogenous suppressor of posttranscriptional gene silencing.; exoribonuclease 4 (XRN4); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: 5'-3' exoribonuclease 3 (TAIR:AT1G75660.1); Has 1935 Blast hits to 1539 proteins in 314 species: Archae - 0; Bacteria - 132; Metazoa - 355; Fungi - 561; Plants - 185; Viruses - 14; Other Eukaryotes - 688 (source: NCBI BLink). & (gnl|cdd|37255 : 162.0) no description available & (gnl|cdd|34654 : 117.0) no description available & (reliability: 366.0) & (original description: Putative AIN1, Description = 5'-3' exoribonuclease 4, PFAM = )' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf07741_272420-283414' '(at2g43190 : 119.0) ribonuclease P family protein; FUNCTIONS IN: ribonuclease activity, ribonuclease P activity, RNA binding; INVOLVED IN: tRNA processing, mRNA cleavage, rRNA processing; LOCATED IN: ribonuclease P complex, nucleolar ribonuclease P complex, ribonuclease MRP complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease P/MRP, subunit p29, eukaryotic/archaeal (InterPro:IPR002730), Ribonuclease P/MRP, p29 subunit, eukaryotic (InterPro:IPR016848). & (reliability: 238.0) & (original description: Putative At2g43190, Description = Ribonuclease P protein subunit p29, PFAM = PF01868)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf08034_213719-216555' '(at5g22250 : 390.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G44260.1); Has 907 Blast hits to 897 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 254; Fungi - 150; Plants - 381; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|35525 : 333.0) no description available & (gnl|cdd|86737 : 260.0) no description available & (reliability: 780.0) & (original description: Putative CAF1, Description = Ribonuclease CAF1, PFAM = PF04857)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf08483_93300-160438' '(at1g55870 : 709.0) Encodes a poly(A)-specific ribonuclease, AtPARN. Expression of AtPARN is upregulated by ABA or stress treatment. Mutant is hypersensitivity to salicylic acid as well as ABA.; ABA-HYPERSENSITIVE GERMINATION 2 (AHG2); FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: response to abscisic acid stimulus, RNA modification, response to stress, response to salicylic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G25430.1); Has 352 Blast hits to 351 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 63; Plants - 63; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (gnl|cdd|37201 : 199.0) no description available & (gnl|cdd|86737 : 103.0) no description available & (reliability: 1418.0) & (original description: Putative PARN, Description = Poly(A)-specific ribonuclease PARN, PFAM = PF04857)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf08504_507990-523266' '(at3g60500 : 417.0) Encodes a 3'-5' exoribonuclease, positively regulates CER3 transcription, involved in cuticular wax biosynthesis.; ECERIFERUM 7 (CER7); CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: ribonuclease PH45A (TAIR:AT3G12990.3). & (gnl|cdd|36827 : 337.0) no description available & (gnl|cdd|32306 : 236.0) no description available & (reliability: 834.0) & (original description: Putative RRP45B, Description = Exosome complex component RRP45B, PFAM = PF03725;PF01138)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf09315_170965-173789' '(at2g32070 : 452.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT1G80780.2); Has 941 Blast hits to 931 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 285; Fungi - 149; Plants - 385; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|35525 : 383.0) no description available & (gnl|cdd|86737 : 295.0) no description available & (reliability: 904.0) & (original description: Putative cnot8, Description = CCR4-NOT transcription complex subunit 7, PFAM = PF04857;PF04857)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf09597_118798-124826' '(at2g02990 : 248.0) member of the ribonuclease T2 family, responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid.; ribonuclease 1 (RNS1); FUNCTIONS IN: ribonuclease activity, endoribonuclease activity; INVOLVED IN: cellular response to phosphate starvation, aging, response to wounding, anthocyanin biosynthetic process; LOCATED IN: extracellular region, cell wall, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568), Ribonuclease T2, active site (InterPro:IPR018188); BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1); Has 2632 Blast hits to 2631 proteins in 514 species: Archae - 0; Bacteria - 441; Metazoa - 304; Fungi - 244; Plants - 1533; Viruses - 7; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|84778 : 236.0) no description available & (gnl|cdd|36855 : 231.0) no description available & (p83618|rn28_pangi : 107.0) Ribonuclease-like storage protein precursor (Root 28 kDa major protein) - Panax ginseng (Korean ginseng) & (reliability: 496.0) & (original description: Putative RNALX, Description = Intracellular ribonuclease LX, PFAM = PF00445)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf10055_519850-535255' '(at1g31500 : 455.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G31530.1); Has 1261 Blast hits to 1240 proteins in 208 species: Archae - 0; Bacteria - 12; Metazoa - 523; Fungi - 244; Plants - 247; Viruses - 0; Other Eukaryotes - 235 (source: NCBI BLink). & (gnl|cdd|35839 : 212.0) no description available & (gnl|cdd|34836 : 159.0) no description available & (reliability: 910.0) & (original description: Putative CCR4-4, Description = Carbon catabolite repressor protein 4 homolog 4, PFAM = PF03372)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf10336_356621-365688' '(at1g24090 : 300.0) RNase H family protein; FUNCTIONS IN: ribonuclease H activity, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT5G51080.2); Has 3412 Blast hits to 3412 proteins in 738 species: Archae - 71; Bacteria - 1533; Metazoa - 7; Fungi - 2; Plants - 1270; Viruses - 0; Other Eukaryotes - 529 (source: NCBI BLink). & (gnl|cdd|82165 : 115.0) no description available & (reliability: 600.0) & (original description: Putative rnhA, Description = RNase H domain-containing protein, PFAM = PF13456)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf10475_90591-95241' '(at3g20420 : 325.0) double-stranded RNA binding / ribonuclease III. Required for 3' external transcribed spacer (ETS) cleavage of the pre-rRNA in vivo. Localizes in the nucleus and cytoplasm.; RNAse THREE-like protein 2 (RTL2); FUNCTIONS IN: double-stranded RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 3 (TAIR:AT5G45150.1); Has 7842 Blast hits to 7448 proteins in 2591 species: Archae - 23; Bacteria - 4871; Metazoa - 597; Fungi - 359; Plants - 331; Viruses - 17; Other Eukaryotes - 1644 (source: NCBI BLink). & (gnl|cdd|35920 : 141.0) no description available & (gnl|cdd|80512 : 129.0) no description available & (reliability: 650.0) & (original description: Putative RTL2, Description = Ribonuclease 3-like protein 2, PFAM = PF14709;PF00035;PF00636)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf10557_44610-52133' '(at2g04530 : 431.0) Encodes a protein with RNAse Z activity suggesting a role in tRNA processing. Protein contains a signal sequence for import into the chloroplast.; CPZ; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: tRNAse Z1 (TAIR:AT1G74700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p60193|rnzn_wheat : 240.0) Nuclear ribonuclease Z (EC 3.1.26.11) (RNase Z) (tRNase Z) (tRNA 3 endonuclease) (Zinc phosphodiesterase ELAC) (Fragment) - Triticum aestivum (Wheat) & (gnl|cdd|31427 : 100.0) no description available & (reliability: 862.0) & (original description: Putative CPZ, Description = Ribonuclease Z, chloroplastic, PFAM = PF12706)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf11009_167070-179612' '(at2g43190 : 229.0) ribonuclease P family protein; FUNCTIONS IN: ribonuclease activity, ribonuclease P activity, RNA binding; INVOLVED IN: tRNA processing, mRNA cleavage, rRNA processing; LOCATED IN: ribonuclease P complex, nucleolar ribonuclease P complex, ribonuclease MRP complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease P/MRP, subunit p29, eukaryotic/archaeal (InterPro:IPR002730), Ribonuclease P/MRP, p29 subunit, eukaryotic (InterPro:IPR016848). & (gnl|cdd|39249 : 88.2) no description available & (reliability: 458.0) & (original description: Putative Sb09g023150, Description = Putative uncharacterized protein Sb09g023150, PFAM = PF01868)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf11825_59882-78374' '(at1g75660 : 1215.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (gnl|cdd|37255 : 1082.0) no description available & (gnl|cdd|34654 : 711.0) no description available & (p23252|cr2_horvu : 113.0) Cold-regulated protein 2 (Fragment) - Hordeum vulgare (Barley) & (reliability: 2430.0) & (original description: Putative XRN3, Description = 5'-3' exoribonuclease 3, PFAM = PF00098;PF03159)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf11909_12234-15055' '(at2g32070 : 446.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT1G80780.2); Has 941 Blast hits to 931 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 285; Fungi - 149; Plants - 385; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|35525 : 377.0) no description available & (gnl|cdd|86737 : 289.0) no description available & (reliability: 892.0) & (original description: Putative caf1, Description = CCR4-NOT transcription complex subunit 7, PFAM = PF04857;PF04857)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf12714_83505-86220' '(at1g24450 : 165.0) NUCLEAR FUSION DEFECTIVE 2 (NFD2); FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); Has 2124 Blast hits to 2124 proteins in 820 species: Archae - 3; Bacteria - 1583; Metazoa - 2; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 509 (source: NCBI BLink). & (reliability: 330.0) & (original description: Putative NFD2, Description = Protein NUCLEAR FUSION DEFECTIVE 2, PFAM = PF14622)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf17478_25447-28319' '(at3g44260 : 364.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: response to biotic stimulus, response to wounding, RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT5G22250.1); Has 907 Blast hits to 905 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 261; Fungi - 149; Plants - 375; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|35525 : 324.0) no description available & (gnl|cdd|86737 : 254.0) no description available & (reliability: 728.0) & (original description: Putative caf1, Description = Ribonuclease CAF1, PFAM = PF04857)' T '27.1.19' 'RNA.processing.ribonucleases' 'niben101scf22099_93553-124525' '(at4g15417 : 137.0) RNAse II-like 1 (RTL1); FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 2 (TAIR:AT3G20420.1); Has 6428 Blast hits to 6386 proteins in 2315 species: Archae - 23; Bacteria - 4325; Metazoa - 271; Fungi - 247; Plants - 236; Viruses - 14; Other Eukaryotes - 1312 (source: NCBI BLink). & (gnl|cdd|29697 : 87.6) no description available & (reliability: 274.0) & (original description: Putative ASU1, Description = Ribonuclease 3-like protein 3, PFAM = PF00636)' T '27.1.20' 'RNA.processing.degradation dicer' 'nbv0.5scaffold31_1383814-1434824' '(at3g43920 : 1320.0) Encodes a ribonuclease III family protein that is required for endogenous RDR2-dependent siRNA (but not miRNA) formation.; dicer-like 3 (DCL3); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: dicer-like 1 (TAIR:AT1G01040.1); Has 13599 Blast hits to 8740 proteins in 2670 species: Archae - 198; Bacteria - 7991; Metazoa - 1636; Fungi - 703; Plants - 621; Viruses - 45; Other Eukaryotes - 2405 (source: NCBI BLink). & (gnl|cdd|35920 : 424.0) no description available & (gnl|cdd|31308 : 157.0) no description available & (reliability: 2640.0) & (original description: Putative DCL3A, Description = Endoribonuclease Dicer homolog 3a, PFAM = PF03368;PF00636;PF00636;PF00271;PF02170;PF00270)' T '27.1.20' 'RNA.processing.degradation dicer' 'niben101scf03304_140433-163766' '(at1g01040 : 2631.0) Encodes a Dicer homolog. Dicer is a RNA helicase involved in microRNA processing. Mutations in this locus can result in embryo lethality. Embryo shape at seed maturity is globular-elongate. Other mutants convert the floral meristems to an indeterminate state, others yet show defects in ovule development. mRNA is expressed in all shoot tissues. DCL1 is able to produce miRNAs and siRNAs.; dicer-like 1 (DCL1); CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Double-stranded RNA-binding (InterPro:IPR001159), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Ribonuclease III (InterPro:IPR000999), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Dicer double-stranded RNA-binding fold (InterPro:IPR005034), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: dicer-like 3 (TAIR:AT3G43920.1). & (gnl|cdd|35920 : 560.0) no description available & (gnl|cdd|31308 : 181.0) no description available & (reliability: 5262.0) & (original description: Putative DCL1, Description = Endoribonuclease Dicer homolog 1, PFAM = PF14709;PF02170;PF03368;PF04851;PF00271;PF00636;PF00636;PF00035)' T '27.1.20' 'RNA.processing.degradation dicer' 'niben101scf06666_84660-145532' '(at3g43920 : 1264.0) Encodes a ribonuclease III family protein that is required for endogenous RDR2-dependent siRNA (but not miRNA) formation.; dicer-like 3 (DCL3); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: dicer-like 1 (TAIR:AT1G01040.1); Has 13599 Blast hits to 8740 proteins in 2670 species: Archae - 198; Bacteria - 7991; Metazoa - 1636; Fungi - 703; Plants - 621; Viruses - 45; Other Eukaryotes - 2405 (source: NCBI BLink). & (gnl|cdd|35920 : 405.0) no description available & (gnl|cdd|31308 : 142.0) no description available & (reliability: 2528.0) & (original description: Putative DCL3A, Description = Endoribonuclease Dicer homolog 3a, PFAM = PF00271;PF02170;PF03368;PF00636;PF00636;PF00270)' T '27.1.20' 'RNA.processing.degradation dicer' 'niben101scf08272_132616-145669' '(at3g03300 : 1504.0) Encodes a Dicer-like protein that functions in the antiviral silencing response in turnip-crinkle virus-infected plants but not in TMV or CMV-strain-Y-infected plants. Involved in the production of ta-siRNAs. Partially antagonizes the production of miRNAs by DCL1. Substitutes for DCL4 to produce viral siRNA when DCL4 is missing or inhibited. Able to produce siRNAs but not miRNAs.; dicer-like 2 (DCL2); FUNCTIONS IN: in 7 functions; INVOLVED IN: defense response to virus, maintenance of DNA methylation, production of ta-siRNAs involved in RNA interference; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Double-stranded RNA-binding (InterPro:IPR001159), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Ribonuclease III (InterPro:IPR000999), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Dicer double-stranded RNA-binding fold (InterPro:IPR005034), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: dicer-like 4 (TAIR:AT5G20320.1). & (gnl|cdd|35920 : 526.0) no description available & (gnl|cdd|31308 : 163.0) no description available & (reliability: 3008.0) & (original description: Putative dcl2, Description = Dicer-like protein 2, PFAM = PF00271;PF03368;PF00270;PF00636;PF00636;PF02170)' T '27.1.20' 'RNA.processing.degradation dicer' 'niben101scf11936_114183-166860' '(at5g20320 : 1573.0) Encodes an RNase III-like enzyme that catalyzes processing of trans-acting small interfering RNA precursors in a distinct small RNA biogenesis pathway. The protein is also involved in the production of 21-nt primary siRNAs from both inverted-repeat constructs and endogenous sequences, as well as the RDR6-dependent 21-nt secondary siRNAs involved in long-range cell-to-cell signaling. It binds DRB4, a ds-RNA binding protein.; dicer-like 4 (DCL4); CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Double-stranded RNA-binding (InterPro:IPR001159), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Ribonuclease III (InterPro:IPR000999), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Dicer double-stranded RNA-binding fold (InterPro:IPR005034), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: dicer-like 2 (TAIR:AT3G03300.3). & (gnl|cdd|35920 : 474.0) no description available & (gnl|cdd|31308 : 161.0) no description available & (reliability: 3146.0) & (original description: Putative DCL4, Description = Dicer-like protein 4, PFAM = PF00636;PF00636;PF14709;PF00271;PF00270;PF03368)' T '27.1.21' 'RNA.processing.siRNA methyltransferase' 'nbv0.3scaffold67687_1-7387' '(at3g21300 : 526.0) RNA methyltransferase family protein; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), 23S rRNA methyltransferase/RumA (InterPro:IPR001566), (Uracil-5)-methyltransferase (InterPro:IPR010280), Deoxyribonuclease/rho motif-related TRAM (InterPro:IPR002792); BEST Arabidopsis thaliana protein match is: zinc finger (CCCH-type) family protein (TAIR:AT2G28450.2); Has 10349 Blast hits to 9632 proteins in 2576 species: Archae - 226; Bacteria - 8529; Metazoa - 196; Fungi - 218; Plants - 136; Viruses - 7; Other Eukaryotes - 1037 (source: NCBI BLink). & (gnl|cdd|37398 : 310.0) no description available & (gnl|cdd|32446 : 268.0) no description available & (reliability: 1052.0) & (original description: Putative rumA, Description = RNA methyltransferase, TrmA family, PFAM = PF05958)' T '27.1.21' 'RNA.processing.siRNA methyltransferase' 'niben044scf00021368ctg000_1-8714' '(at4g20910 : 630.0) Encodes an enhancer of hua1 and hua2 tha acts to specify reproductive organ identities and to repress A gene function. HEN1 also shares AG's non-homeotic function in controlling floral determinacy. Mutants display corymb-like inflorescences. HEN1 is a methyltransferase that methylates miRNAs and siRNAs on the ribose of the last nucleotide. The 3'-end methylation probably protects the 3' ends of the small RNAs from uridylation.; HUA ENHANCER 1 (HEN1); FUNCTIONS IN: RNA methyltransferase activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding protein Lupus La (InterPro:IPR006630), Methyltransferase type 12 (InterPro:IPR013217); BEST Arabidopsis thaliana protein match is: double-stranded RNA-binding domain (DsRBD)-containing protein (TAIR:AT4G20920.1). & (gnl|cdd|36263 : 161.0) no description available & (reliability: 1260.0) & (original description: Putative HEN1, Description = Small RNA 2'-O-methyltransferase, PFAM = )' T '27.1.21' 'RNA.processing.siRNA methyltransferase' 'niben101scf01061_813837-832184' '(at4g20910 : 742.0) Encodes an enhancer of hua1 and hua2 tha acts to specify reproductive organ identities and to repress A gene function. HEN1 also shares AG's non-homeotic function in controlling floral determinacy. Mutants display corymb-like inflorescences. HEN1 is a methyltransferase that methylates miRNAs and siRNAs on the ribose of the last nucleotide. The 3'-end methylation probably protects the 3' ends of the small RNAs from uridylation.; HUA ENHANCER 1 (HEN1); FUNCTIONS IN: RNA methyltransferase activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding protein Lupus La (InterPro:IPR006630), Methyltransferase type 12 (InterPro:IPR013217); BEST Arabidopsis thaliana protein match is: double-stranded RNA-binding domain (DsRBD)-containing protein (TAIR:AT4G20920.1). & (gnl|cdd|36263 : 158.0) no description available & (reliability: 1484.0) & (original description: Putative CRM2, Description = Small RNA 2'-O-methyltransferase, PFAM = )' T '27.1.21' 'RNA.processing.siRNA methyltransferase' 'niben101scf01395_94082-105728' '(at4g20910 : 798.0) Encodes an enhancer of hua1 and hua2 tha acts to specify reproductive organ identities and to repress A gene function. HEN1 also shares AG's non-homeotic function in controlling floral determinacy. Mutants display corymb-like inflorescences. HEN1 is a methyltransferase that methylates miRNAs and siRNAs on the ribose of the last nucleotide. The 3'-end methylation probably protects the 3' ends of the small RNAs from uridylation.; HUA ENHANCER 1 (HEN1); FUNCTIONS IN: RNA methyltransferase activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding protein Lupus La (InterPro:IPR006630), Methyltransferase type 12 (InterPro:IPR013217); BEST Arabidopsis thaliana protein match is: double-stranded RNA-binding domain (DsRBD)-containing protein (TAIR:AT4G20920.1). & (gnl|cdd|36263 : 156.0) no description available & (reliability: 1596.0) & (original description: Putative HEN1, Description = Small RNA 2'-O-methyltransferase, PFAM = PF13489)' T '27.1.21' 'RNA.processing.siRNA methyltransferase' 'niben101scf20904_1-2688' '(at3g21300 : 240.0) RNA methyltransferase family protein; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), 23S rRNA methyltransferase/RumA (InterPro:IPR001566), (Uracil-5)-methyltransferase (InterPro:IPR010280), Deoxyribonuclease/rho motif-related TRAM (InterPro:IPR002792); BEST Arabidopsis thaliana protein match is: zinc finger (CCCH-type) family protein (TAIR:AT2G28450.2); Has 10349 Blast hits to 9632 proteins in 2576 species: Archae - 226; Bacteria - 8529; Metazoa - 196; Fungi - 218; Plants - 136; Viruses - 7; Other Eukaryotes - 1037 (source: NCBI BLink). & (gnl|cdd|37398 : 119.0) no description available & (gnl|cdd|32446 : 92.7) no description available & (reliability: 480.0) & (original description: Putative At3g21300, Description = Putative RNA methyltransferase, PFAM = )' T '27.2' 'RNA.transcription' 'nbv0.3scaffold1418_77187-83241' '(at4g24440 : 178.0) transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S); FUNCTIONS IN: RNA polymerase II transcription factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIIA complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor IIA, gamma subunit (InterPro:IPR003194), Transcription factor IIA, beta-barrel (InterPro:IPR009088), Transcription initiation factor IIA, gamma subunit, N-terminal (InterPro:IPR015872), Transcription initiation factor IIA, gamma subunit, C-terminal (InterPro:IPR015871), Transcription factor IIA, helical (InterPro:IPR009083); Has 553 Blast hits to 553 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 188; Fungi - 162; Plants - 188; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (q94hl5|t2ag_orysa : 168.0) Transcription initiation factor IIA gamma chain (TFIIA-gamma) - Oryza sativa (Rice) & (gnl|cdd|38673 : 151.0) no description available & (gnl|cdd|34724 : 107.0) no description available & (reliability: 356.0) & (original description: Putative Tf2aS, Description = Transcription initiation factor IIA subunit 2, PFAM = PF02751;PF02268)' T '27.2' 'RNA.transcription' 'nbv0.3scaffold5854_54907-61171' '(at3g46780 : 439.0) plastid transcriptionally active 16 (PTAC16); FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G18890.1); Has 1243 Blast hits to 1093 proteins in 359 species: Archae - 5; Bacteria - 555; Metazoa - 73; Fungi - 75; Plants - 168; Viruses - 22; Other Eukaryotes - 345 (source: NCBI BLink). & (gnl|cdd|36417 : 144.0) no description available & (reliability: 878.0) & (original description: Putative PTAC16, Description = Protein plastid transcriptionally active 16, chloroplastic, PFAM = PF13460)' T '27.2' 'RNA.transcription' 'nbv0.3scaffold12610_10135-24475' '(at3g52270 : 258.0) Transcription initiation factor IIF, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, catalytic activity, ATP binding; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIIF complex; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039), Transcription initiation factor IIF, beta subunit (InterPro:IPR003196); BEST Arabidopsis thaliana protein match is: Transcription initiation factor IIF, beta subunit (TAIR:AT1G75510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38116 : 202.0) no description available & (gnl|cdd|66000 : 95.1) no description available & (reliability: 478.0) & (original description: Putative At3g52270, Description = Transcription initiation factor IIF, beta subunit, PFAM = PF02270)' T '27.2' 'RNA.transcription' 'nbv0.3scaffold18418_4397-11293' '(at1g75510 : 309.0) Transcription initiation factor IIF, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, general RNA polymerase II transcription factor activity, catalytic activity, ATP binding, ATP-dependent helicase activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter, transcription from RNA polymerase II promoter; LOCATED IN: mitochondrion, transcription factor TFIIF complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039), Transcription initiation factor IIF, beta subunit (InterPro:IPR003196), Transcription initiation factor IIF, beta subunit, subgroup (InterPro:IPR016640); BEST Arabidopsis thaliana protein match is: Transcription initiation factor IIF, beta subunit (TAIR:AT3G52270.1); Has 346 Blast hits to 346 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 128; Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|38116 : 230.0) no description available & (gnl|cdd|34693 : 118.0) no description available & (reliability: 618.0) & (original description: Putative BnaC02g24370D, Description = BnaC02g24370D protein, PFAM = PF02270)' T '27.2' 'RNA.transcription' 'nbv0.3scaffold19212_28052-33125' '(at5g39840 : 528.0) ATP-dependent RNA helicase, mitochondrial, putative; FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial (SUV3) (TAIR:AT4G14790.1); Has 4068 Blast hits to 4044 proteins in 754 species: Archae - 43; Bacteria - 1236; Metazoa - 267; Fungi - 388; Plants - 157; Viruses - 16; Other Eukaryotes - 1961 (source: NCBI BLink). & (gnl|cdd|36171 : 379.0) no description available & (reliability: 1056.0) & (original description: Putative dnc, Description = ATP-dependent RNA helicase SUPV3L1, mitochondrial, PFAM = PF12513)' T '27.2' 'RNA.transcription' 'nbv0.3scaffold20902_1-15090' '(at3g52090 : 191.0) Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB11 and the E. oli RNA polymerase alpha subunit.; NRPB11; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex, DNA-directed RNA polymerase II, holoenzyme, DNA-directed RNA polymerase II, core complex, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site (InterPro:IPR008193), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025). & (gnl|cdd|39593 : 157.0) no description available & (reliability: 382.0) & (original description: Putative NRPB11, Description = DNA-directed RNA polymerases II, IV and V subunit 11, PFAM = PF13656)' T '27.2' 'RNA.transcription' 'nbv0.3scaffold21119_570-19506' '(at1g63020 : 1288.0) Encodes one of two alternative largest subunits of a putative plant-specific RNA polymerase IV (aka RNA polymerase D). Required for posttranscriptional gene silencing.; nuclear RNA polymerase D1A (NRPD1A); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: in 7 processes; LOCATED IN: nucleus, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083), Protein of unknown function DUF3223 (InterPro:IPR021602), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D1B (TAIR:AT2G40030.1). & (gnl|cdd|35481 : 679.0) no description available & (gnl|cdd|82682 : 239.0) no description available & (reliability: 2576.0) & (original description: Putative NRPD1, Description = DNA-directed RNA polymerase IV subunit 1, PFAM = PF04997;PF11523;PF04983;PF05000;PF00623)' T '27.2' 'RNA.transcription' 'nbv0.3scaffold21200_23468-30733' '(at4g13670 : 252.0) plastid transcriptionally active 5 (PTAC5); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, metabolic process; LOCATED IN: plastid chromosome, chloroplast thylakoid membrane, chloroplast, nucleoid, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan binding-like (InterPro:IPR002477), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 835 Blast hits to 827 proteins in 285 species: Archae - 9; Bacteria - 385; Metazoa - 155; Fungi - 28; Plants - 81; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink). & (reliability: 504.0) & (original description: Putative PTAC5, Description = At4g13670, PFAM = PF01471)' T '27.2' 'RNA.transcription' 'nbv0.3scaffold24794_144-2731' '(at4g14660 : 121.0) Non-catalytic subunit specific to DNA-directed RNA polymerase V; homologous to budding yeast RPB7; NRPE7; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), RNA polymerase Rpb7, N-terminal (InterPro:IPR005576); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb7-like, N-terminal domain (TAIR:AT3G22900.1); Has 678 Blast hits to 678 proteins in 287 species: Archae - 183; Bacteria - 0; Metazoa - 137; Fungi - 169; Plants - 112; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|38508 : 108.0) no description available & (reliability: 242.0) & (original description: Putative)' T '27.2' 'RNA.transcription' 'nbv0.3scaffold33218_16293-40825' '(at1g29940 : 1583.0) Encodes a subunit of RNA polymerase 1 (aka RNA polymerase A).; nuclear RNA polymerase A2 (NRPA2); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase I, Rpa2 specific (InterPro:IPR009674), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C2 (TAIR:AT5G45140.1); Has 19116 Blast hits to 18561 proteins in 6776 species: Archae - 498; Bacteria - 7658; Metazoa - 537; Fungi - 3600; Plants - 1857; Viruses - 241; Other Eukaryotes - 4725 (source: NCBI BLink). & (gnl|cdd|35437 : 1304.0) no description available & (gnl|cdd|30434 : 523.0) no description available & (q85x54|rpob_pinko : 80.5) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Pinus koraiensis (Korean pine) & (reliability: 3166.0) & (original description: Putative NRPA2, Description = DNA-directed RNA polymerase I subunit 2, PFAM = PF04565;PF04561;PF04563;PF00562;PF06883)' T '27.2' 'RNA.transcription' 'nbv0.3scaffold36113_1124-7934' '(at5g45140 : 1770.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C2 (NRPC2); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT4G21710.1); Has 31946 Blast hits to 25220 proteins in 8516 species: Archae - 496; Bacteria - 14545; Metazoa - 599; Fungi - 7189; Plants - 2320; Viruses - 240; Other Eukaryotes - 6557 (source: NCBI BLink). & (gnl|cdd|35436 : 1734.0) no description available & (gnl|cdd|82681 : 956.0) no description available & (q85fm7|rpob_adica : 171.0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Adiantum capillus-veneris (Maidenhair fern) & (reliability: 3540.0) & (original description: Putative NRPC2, Description = DNA-directed RNA polymerase III subunit 2, PFAM = PF00562;PF04560;PF04565;PF04563;PF04566;PF04561;PF04567)' T '27.2' 'RNA.transcription' 'nbv0.3scaffold36184_16605-23498' '(at5g43130 : 254.0) TBP-associated factor 4 (TAF4); FUNCTIONS IN: transcription initiation factor activity; INVOLVED IN: transcription initiation; LOCATED IN: transcription factor TFIID complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID component TAF4 (InterPro:IPR007900), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: TBP-associated factor 4B (TAIR:AT1G27720.1). & (gnl|cdd|86833 : 161.0) no description available & (gnl|cdd|37552 : 90.9) no description available & (reliability: 508.0) & (original description: Putative TAF4, Description = Transcription initiation factor TFIID subunit 4, PFAM = PF05236)' T '27.2' 'RNA.transcription' 'nbv0.3scaffold36956_8788-17989' '(at5g43130 : 432.0) TBP-associated factor 4 (TAF4); FUNCTIONS IN: transcription initiation factor activity; INVOLVED IN: transcription initiation; LOCATED IN: transcription factor TFIID complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID component TAF4 (InterPro:IPR007900), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: TBP-associated factor 4B (TAIR:AT1G27720.1). & (gnl|cdd|86833 : 179.0) no description available & (reliability: 864.0) & (original description: Putative TAF4B, Description = Transcription initiation factor TFIID subunit 4b, PFAM = PF12174;PF05236)' T '27.2' 'RNA.transcription' 'nbv0.3scaffold49478_3158-9204' '(at1g75510 : 165.0) Transcription initiation factor IIF, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, general RNA polymerase II transcription factor activity, catalytic activity, ATP binding, ATP-dependent helicase activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter, transcription from RNA polymerase II promoter; LOCATED IN: mitochondrion, transcription factor TFIIF complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039), Transcription initiation factor IIF, beta subunit (InterPro:IPR003196), Transcription initiation factor IIF, beta subunit, subgroup (InterPro:IPR016640); BEST Arabidopsis thaliana protein match is: Transcription initiation factor IIF, beta subunit (TAIR:AT3G52270.1); Has 346 Blast hits to 346 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 128; Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|38116 : 135.0) no description available & (reliability: 330.0) & (original description: Putative umc1196a, Description = General transcription factor IIF subunit 2, PFAM = PF02270)' T '27.2' 'RNA.transcription' 'nbv0.3scaffold51040_6608-14810' '(at5g60040 : 151.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C1 (NRPC1); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), DNA-directed RNA polymerase III largest subunit (InterPro:IPR015700), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: RNA polymerase II large subunit (TAIR:AT4G35800.1). & (gnl|cdd|35482 : 149.0) no description available & (gnl|cdd|82682 : 81.4) no description available & (reliability: 302.0) & (original description: Putative rpc1, Description = DNA-directed RNA polymerase subunit, PFAM = PF04983)' T '27.2' 'RNA.transcription' 'nbv0.3scaffold51724_1-12288' '(at3g21350 : 239.0) MED6; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med6 (InterPro:IPR007018), Mediator complex, subunit Med6, metazoa/plant (InterPro:IPR016820); Has 341 Blast hits to 341 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 132; Plants - 38; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|38379 : 123.0) no description available & (gnl|cdd|68505 : 108.0) no description available & (reliability: 478.0) & (original description: Putative Med6, Description = Mediator of RNA polymerase II transcription subunit 6, PFAM = PF04934)' T '27.2' 'RNA.transcription' 'nbv0.3scaffold55382_506-9126' '(at3g15390 : 246.0) Encodes a novel protein that is similar to PRL1 interacting factor and is involved in virus induced silencing.; silencing defective 5 (SDE5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: production of ta-siRNAs involved in RNA interference; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1771 (InterPro:IPR013899); BEST Arabidopsis thaliana protein match is: smr (Small MutS Related) domain-containing protein (TAIR:AT5G58720.1). & (reliability: 492.0) & (original description: Putative , Description = , PFAM = PF08590)' T '27.2' 'RNA.transcription' 'nbv0.3scaffold56439_2539-9045' '(at1g60620 : 497.0) RNA polymerase I subunit 43 (RPAC43); FUNCTIONS IN: DNA-directed RNA polymerase activity, protein dimerization activity, DNA binding; INVOLVED IN: transcription; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, insert domain (InterPro:IPR011262), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RpoA/D/Rpb3-type (InterPro:IPR011263), DNA-directed RNA polymerase, 30-40kDa subunit, conserved site (InterPro:IPR001514), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT1G60850.1); Has 1342 Blast hits to 1342 proteins in 354 species: Archae - 247; Bacteria - 1; Metazoa - 281; Fungi - 345; Plants - 107; Viruses - 0; Other Eukaryotes - 361 (source: NCBI BLink). & (gnl|cdd|36734 : 432.0) no description available & (gnl|cdd|47937 : 216.0) no description available & (reliability: 994.0) & (original description: Putative polr1c, Description = DNA-directed RNA polymerases I and III subunit rpac1, PFAM = PF01193;PF01000)' T '27.2' 'RNA.transcription' 'nbv0.3scaffold58936_7281-12224' '(at4g20330 : 308.0) Transcription initiation factor TFIIE, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIIE complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIIE, beta subunit (InterPro:IPR016656), Transcription factor TFIIE beta subunit, DNA-binding domain (InterPro:IPR003166); BEST Arabidopsis thaliana protein match is: Transcription initiation factor TFIIE, beta subunit (TAIR:AT4G21010.1); Has 316 Blast hits to 316 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 101; Plants - 70; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|38305 : 207.0) no description available & (reliability: 616.0) & (original description: Putative Sb06g028040, Description = Transcription initiation factor IIE subunit beta, PFAM = PF02186)' T '27.2' 'RNA.transcription' 'nbv0.3scaffold61410_4454-10831' '(at2g40030 : 249.0) Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit. Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing.; nuclear RNA polymerase D1B (NRPD1B); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3223 (InterPro:IPR021602), RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D1A (TAIR:AT1G63020.2); Has 52919 Blast hits to 31940 proteins in 6835 species: Archae - 366; Bacteria - 10380; Metazoa - 13235; Fungi - 6920; Plants - 7147; Viruses - 757; Other Eukaryotes - 14114 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative RPE1, Description = DNA-directed RNA polymerase subunit, PFAM = PF11523)' T '27.2' 'RNA.transcription' 'nbv0.3scaffold63307_1913-4422' '(at3g57660 : 129.0) Encodes a subunit of RNA polymerase I (aka RNA polymerase A).; nuclear RNA polymerase A1 (NRPA1); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), DNA-directed RNA pol I, largest subunit (InterPro:IPR015699), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 (TAIR:AT5G60040.1); Has 39638 Blast hits to 28014 proteins in 7318 species: Archae - 983; Bacteria - 11101; Metazoa - 5787; Fungi - 2930; Plants - 6395; Viruses - 781; Other Eukaryotes - 11661 (source: NCBI BLink). & (gnl|cdd|35483 : 120.0) no description available & (reliability: 258.0) & (original description: Putative BnaC08g28670D, Description = DNA-directed RNA polymerase subunit, PFAM = PF04997)' T '27.2' 'RNA.transcription' 'nbv0.3scaffold71180_2867-9032' '(at2g15430 : 504.0) Non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB3 and the E. coli RNA polymerase alpha subunit. A closely related paralog, encoded by At2g15400, can substitute for At2g15430 in the context of Pol V.; NRPB3; FUNCTIONS IN: DNA-directed RNA polymerase activity, protein dimerization activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: in 6 components; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, insert domain (InterPro:IPR011262), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RpoA/D/Rpb3-type (InterPro:IPR011263), DNA-directed RNA polymerase, 30-40kDa subunit, conserved site (InterPro:IPR001514), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT2G15400.1); Has 1362 Blast hits to 1362 proteins in 353 species: Archae - 243; Bacteria - 1; Metazoa - 278; Fungi - 347; Plants - 109; Viruses - 0; Other Eukaryotes - 384 (source: NCBI BLink). & (gnl|cdd|36735 : 356.0) no description available & (gnl|cdd|47937 : 201.0) no description available & (reliability: 1008.0) & (original description: Putative NRPB3, Description = DNA-directed RNA polymerases II, IV and V subunit 3, PFAM = PF01193;PF01000)' T '27.2' 'RNA.transcription' 'nbv0.3scaffold71401_780-8987' '(at3g15390 : 162.0) Encodes a novel protein that is similar to PRL1 interacting factor and is involved in virus induced silencing.; silencing defective 5 (SDE5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: production of ta-siRNAs involved in RNA interference; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1771 (InterPro:IPR013899); BEST Arabidopsis thaliana protein match is: smr (Small MutS Related) domain-containing protein (TAIR:AT5G58720.1). & (reliability: 324.0) & (original description: Putative , Description = , PFAM = PF08590)' T '27.2' 'RNA.transcription' 'nbv0.3scaffold85937_1760-6097' '(at5g60040 : 476.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C1 (NRPC1); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), DNA-directed RNA polymerase III largest subunit (InterPro:IPR015700), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: RNA polymerase II large subunit (TAIR:AT4G35800.1). & (gnl|cdd|35482 : 476.0) no description available & (gnl|cdd|82682 : 364.0) no description available & (q8wi25|rpoc1_psinu : 127.0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) - Psilotum nudum (Whisk fern) & (reliability: 952.0) & (original description: Putative rpc1, Description = DNA-directed RNA polymerase subunit, PFAM = PF04997;PF00623;PF04983)' T '27.2' 'RNA.transcription' 'nbv0.3scaffold99022_891-4068' '(at3g23590 : 137.0) REF4-related 1 (RFR1); BEST Arabidopsis thaliana protein match is: reduced epidermal fluorescence 4 (TAIR:AT2G48110.1); Has 143 Blast hits to 139 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative REF4, Description = Mediator of RNA polymerase II transcription subunit 33A, PFAM = )' T '27.2' 'RNA.transcription' 'nbv0.3scaffold119237_1-2226' '(gnl|cdd|35483 : 90.8) no description available & (at3g57660 : 81.3) Encodes a subunit of RNA polymerase I (aka RNA polymerase A).; nuclear RNA polymerase A1 (NRPA1); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), DNA-directed RNA pol I, largest subunit (InterPro:IPR015699), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 (TAIR:AT5G60040.1); Has 39638 Blast hits to 28014 proteins in 7318 species: Archae - 983; Bacteria - 11101; Metazoa - 5787; Fungi - 2930; Plants - 6395; Viruses - 781; Other Eukaryotes - 11661 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative glysoja_033066, Description = DNA-directed RNA polymerase subunit, PFAM = )' T '27.2' 'RNA.transcription' 'nbv0.5scaffold70_1505758-1525078' '(at3g23780 : 1425.0) This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin.; nuclear RNA polymerase D2A (NRPD2A); CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D2B (TAIR:AT3G18090.1). & (gnl|cdd|35435 : 1074.0) no description available & (gnl|cdd|82681 : 641.0) no description available & (q85fm7|rpob_adica : 103.0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Adiantum capillus-veneris (Maidenhair fern) & (reliability: 2850.0) & (original description: Putative NRPD2, Description = DNA-directed RNA polymerases IV and V subunit 2, PFAM = PF00562;PF04561;PF04566;PF04567;PF04565;PF04563;PF04560)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold190_610728-623027' '(at3g21350 : 268.0) MED6; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med6 (InterPro:IPR007018), Mediator complex, subunit Med6, metazoa/plant (InterPro:IPR016820); Has 341 Blast hits to 341 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 132; Plants - 38; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|38379 : 129.0) no description available & (gnl|cdd|68505 : 111.0) no description available & (reliability: 536.0) & (original description: Putative Med6, Description = Mediator of RNA polymerase II transcription subunit 6, PFAM = PF04934)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold540_254041-290441' '(at1g60620 : 447.0) RNA polymerase I subunit 43 (RPAC43); FUNCTIONS IN: DNA-directed RNA polymerase activity, protein dimerization activity, DNA binding; INVOLVED IN: transcription; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, insert domain (InterPro:IPR011262), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RpoA/D/Rpb3-type (InterPro:IPR011263), DNA-directed RNA polymerase, 30-40kDa subunit, conserved site (InterPro:IPR001514), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT1G60850.1); Has 1342 Blast hits to 1342 proteins in 354 species: Archae - 247; Bacteria - 1; Metazoa - 281; Fungi - 345; Plants - 107; Viruses - 0; Other Eukaryotes - 361 (source: NCBI BLink). & (gnl|cdd|36734 : 388.0) no description available & (gnl|cdd|47937 : 179.0) no description available & (reliability: 894.0) & (original description: Putative polr1c, Description = DNA-directed RNA polymerases I and III subunit rpac1, PFAM = PF01193;PF01000)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold622_548378-564719' '(at3g23780 : 1590.0) This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin.; nuclear RNA polymerase D2A (NRPD2A); CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D2B (TAIR:AT3G18090.1). & (gnl|cdd|35435 : 1174.0) no description available & (gnl|cdd|82681 : 692.0) no description available & (p56299|rpob_chlvu : 135.0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Chlorella vulgaris (Green alga) & (reliability: 3180.0) & (original description: Putative NRPD2, Description = DNA-directed RNA polymerases IV and V subunit 2, PFAM = PF04566;PF04565;PF04561;PF04567;PF04560;PF00562;PF04563)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold783_479166-484058' '(at2g29540 : 130.0) RNA polymerase I(A) and III(C) 14 kDa subunit; RNApolymerase 14 kDa subunit (RPC14); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: tRNA transcription; LOCATED IN: DNA-directed RNA polymerase III complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025); Has 159 Blast hits to 159 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 74; Fungi - 5; Plants - 54; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|38648 : 129.0) no description available & (reliability: 260.0) & (original description: Putative RPC19, Description = RNA polymerase subunit, PFAM = PF13656)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold939_2812-23698' '(at3g09360 : 373.0) Cyclin/Brf1-like TBP-binding protein; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, transcription activator activity, zinc ion binding, translation initiation factor activity; INVOLVED IN: translational initiation, positive regulation of transcription, regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Cyclin-like (InterPro:IPR011028), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-related (InterPro:IPR013763), Brf1-like TBP-binding (InterPro:IPR011665), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin/Brf1-like TBP-binding protein (TAIR:AT2G45100.1); Has 20615 Blast hits to 13314 proteins in 1023 species: Archae - 483; Bacteria - 1191; Metazoa - 7169; Fungi - 2226; Plants - 882; Viruses - 261; Other Eukaryotes - 8403 (source: NCBI BLink). & (gnl|cdd|36811 : 261.0) no description available & (gnl|cdd|31595 : 110.0) no description available & (reliability: 746.0) & (original description: Putative MEE65, Description = Transcription factor IIIB 90 kDa subunit, PFAM = PF07741;PF00382)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold999_514702-516746' '(p06269|rpoa_tobac : 648.0) DNA-directed RNA polymerase alpha chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit alpha) (RNA polymerase subunit alpha) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79232 : 631.0) no description available & (atcg00740 : 510.0) RNA polymerase alpha subunit; RNA polymerase subunit alpha (RPOA); FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: RNA elongation; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, insert domain (InterPro:IPR011262), DNA-directed RNA polymerase, alpha subunit (InterPro:IPR011773), RNA polymerase, alpha subunit, C-terminal (InterPro:IPR011260), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RpoA/D/Rpb3-type (InterPro:IPR011263), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025). & (reliability: 1020.0) & (original description: Putative rpoA, Description = DNA-directed RNA polymerase subunit alpha, PFAM = PF03118;PF01000;PF01193)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold1007_188709-197173' '(at4g14660 : 267.0) Non-catalytic subunit specific to DNA-directed RNA polymerase V; homologous to budding yeast RPB7; NRPE7; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), RNA polymerase Rpb7, N-terminal (InterPro:IPR005576); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb7-like, N-terminal domain (TAIR:AT3G22900.1); Has 678 Blast hits to 678 proteins in 287 species: Archae - 183; Bacteria - 0; Metazoa - 137; Fungi - 169; Plants - 112; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|38508 : 190.0) no description available & (gnl|cdd|31292 : 91.4) no description available & (p46279|rpb7_soybn : 88.2) DNA-directed RNA polymerase II 19 kDa polypeptide (EC 2.7.7.6) (RNA polymerase II subunit 5) - Glycine max (Soybean) & (reliability: 534.0) & (original description: Putative NRPE7, Description = DNA-directed RNA polymerase V subunit 7, PFAM = PF03876)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold1072_13053-25620' '(at5g60040 : 276.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C1 (NRPC1); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), DNA-directed RNA polymerase III largest subunit (InterPro:IPR015700), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: RNA polymerase II large subunit (TAIR:AT4G35800.1). & (gnl|cdd|35482 : 260.0) no description available & (gnl|cdd|82682 : 123.0) no description available & (reliability: 552.0) & (original description: Putative RPC1, Description = RNA polymerase III large subunit, PFAM = PF04983)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold1102_19677-416461' '(at5g43130 : 310.0) TBP-associated factor 4 (TAF4); FUNCTIONS IN: transcription initiation factor activity; INVOLVED IN: transcription initiation; LOCATED IN: transcription factor TFIID complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID component TAF4 (InterPro:IPR007900), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: TBP-associated factor 4B (TAIR:AT1G27720.1). & (gnl|cdd|86833 : 169.0) no description available & (gnl|cdd|37552 : 84.8) no description available & (reliability: 620.0) & (original description: Putative BnaC04g17340D, Description = BnaC04g17340D protein, PFAM = PF05236)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold1106_321543-325220' '(at5g41010 : 82.0) Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB12.; NRPB12; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex, nucleus, DNA-directed RNA polymerase II, core complex, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rbp10 (InterPro:IPR006591); BEST Arabidopsis thaliana protein match is: DNA directed RNA polymerase, 7 kDa subunit (TAIR:AT1G53690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative NRPB12, Description = DNA-directed RNA polymerases II, IV and V subunit 12, PFAM = PF03604)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold1485_331622-344881' '(at1g54250 : 141.0) One of two highly similar proteins that can serve as non-catalytic subunits of Nuclear RNA polymerases II and V; homologous to budding yeast RPB8. Probably redundant with At3g59600.; NRPB8A; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase II, core complex; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), RNA polymerase, Rpb8 (InterPro:IPR005570); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb8 (TAIR:AT3G59600.1); Has 513 Blast hits to 511 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 205; Plants - 84; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|38610 : 132.0) no description available & (gnl|cdd|86462 : 126.0) no description available & (reliability: 282.0) & (original description: Putative rpb8, Description = DNA-directed RNA polymerases I, II, and III subunit RPABC3, PFAM = PF03870)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold1845_94815-129038' '(at2g40030 : 1098.0) Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit. Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing.; nuclear RNA polymerase D1B (NRPD1B); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3223 (InterPro:IPR021602), RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D1A (TAIR:AT1G63020.2); Has 52919 Blast hits to 31940 proteins in 6835 species: Archae - 366; Bacteria - 10380; Metazoa - 13235; Fungi - 6920; Plants - 7147; Viruses - 757; Other Eukaryotes - 14114 (source: NCBI BLink). & (gnl|cdd|35481 : 360.0) no description available & (gnl|cdd|82682 : 123.0) no description available & (reliability: 2196.0) & (original description: Putative KTF1, Description = DNA-directed RNA polymerase subunit, PFAM = PF04983;PF11523;PF04998;PF04997)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold2587_19742-32508' '(at3g57080 : 189.0) Non-catalytic subunit unique to Nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB5.; NRPE5; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, Rpb5, N-terminal (InterPro:IPR005571), RNA polymerase, subunit H/Rpb5 C-terminal (InterPro:IPR000783), DNA-directed RNA polymerase, RPB5 subunit (InterPro:IPR014381); BEST Arabidopsis thaliana protein match is: RNA polymerase II fifth largest subunit, D (TAIR:AT2G41340.1); Has 910 Blast hits to 910 proteins in 323 species: Archae - 199; Bacteria - 0; Metazoa - 157; Fungi - 216; Plants - 117; Viruses - 5; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|38428 : 164.0) no description available & (gnl|cdd|67484 : 91.9) no description available & (reliability: 378.0) & (original description: Putative RPB5B, Description = DNA-directed RNA polymerases I, II, and III subunit RPABC1, PFAM = PF01191;PF03871)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold2650_185381-211693' '(at3g49000 : 370.0) RNA polymerase III subunit RPC82 family protein; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase III subunit RPC82-related, helix-turn-helix (InterPro:IPR013197), RNA polymerase III Rpc82, C -terminal (InterPro:IPR008806); Has 265 Blast hits to 257 proteins in 119 species: Archae - 0; Bacteria - 2; Metazoa - 106; Fungi - 69; Plants - 57; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|37798 : 216.0) no description available & (gnl|cdd|69183 : 122.0) no description available & (reliability: 740.0) & (original description: Putative BnaC03g52680D, Description = BnaC03g52680D protein, PFAM = PF05645;PF08221)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold3060_210580-222198' '(gnl|cdd|38428 : 228.0) no description available & (at3g57080 : 215.0) Non-catalytic subunit unique to Nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB5.; NRPE5; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, Rpb5, N-terminal (InterPro:IPR005571), RNA polymerase, subunit H/Rpb5 C-terminal (InterPro:IPR000783), DNA-directed RNA polymerase, RPB5 subunit (InterPro:IPR014381); BEST Arabidopsis thaliana protein match is: RNA polymerase II fifth largest subunit, D (TAIR:AT2G41340.1); Has 910 Blast hits to 910 proteins in 323 species: Archae - 199; Bacteria - 0; Metazoa - 157; Fungi - 216; Plants - 117; Viruses - 5; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|67484 : 92.2) no description available & (reliability: 430.0) & (original description: Putative NRPE5A, Description = DNA-directed RNA polymerase V subunit 5A, PFAM = PF03871;PF01191)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold3132_138178-161838' '(at2g40030 : 1642.0) Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit. Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing.; nuclear RNA polymerase D1B (NRPD1B); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3223 (InterPro:IPR021602), RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D1A (TAIR:AT1G63020.2); Has 52919 Blast hits to 31940 proteins in 6835 species: Archae - 366; Bacteria - 10380; Metazoa - 13235; Fungi - 6920; Plants - 7147; Viruses - 757; Other Eukaryotes - 14114 (source: NCBI BLink). & (gnl|cdd|35481 : 709.0) no description available & (gnl|cdd|82682 : 252.0) no description available & (reliability: 3284.0) & (original description: Putative NRPE1, Description = DNA-directed RNA polymerase V subunit 1, PFAM = PF04997;PF04983;PF00623;PF11523;PF04998)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold3855_144368-158402' '(at3g23590 : 1371.0) REF4-related 1 (RFR1); BEST Arabidopsis thaliana protein match is: reduced epidermal fluorescence 4 (TAIR:AT2G48110.1); Has 143 Blast hits to 139 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 2742.0) & (original description: Putative MED33A, Description = Mediator of RNA polymerase II transcription subunit 33A, PFAM = )' T '27.2' 'RNA.transcription' 'nbv0.5scaffold3881_36049-40445' '(at3g57660 : 216.0) Encodes a subunit of RNA polymerase I (aka RNA polymerase A).; nuclear RNA polymerase A1 (NRPA1); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), DNA-directed RNA pol I, largest subunit (InterPro:IPR015699), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 (TAIR:AT5G60040.1); Has 39638 Blast hits to 28014 proteins in 7318 species: Archae - 983; Bacteria - 11101; Metazoa - 5787; Fungi - 2930; Plants - 6395; Viruses - 781; Other Eukaryotes - 11661 (source: NCBI BLink). & (gnl|cdd|35483 : 199.0) no description available & (gnl|cdd|47938 : 145.0) no description available & (reliability: 432.0) & (original description: Putative nuc1, Description = DNA-directed RNA polymerase subunit, PFAM = PF00623)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold4197_54021-59721' '(at1g06790 : 241.0) RNA polymerase Rpb7 N-terminal domain-containing protein; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rpb7, N-terminal (InterPro:IPR005576), RNA polymerase III, subunit Rpc25 (InterPro:IPR013238); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38507 : 211.0) no description available & (gnl|cdd|31292 : 118.0) no description available & (reliability: 482.0) & (original description: Putative RPB7B, Description = DNA-directed RNA polymerase II, 19 kDa polypeptide, PFAM = PF08292;PF03876)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold4265_15922-41119' '(at3g09360 : 416.0) Cyclin/Brf1-like TBP-binding protein; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, transcription activator activity, zinc ion binding, translation initiation factor activity; INVOLVED IN: translational initiation, positive regulation of transcription, regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Cyclin-like (InterPro:IPR011028), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-related (InterPro:IPR013763), Brf1-like TBP-binding (InterPro:IPR011665), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin/Brf1-like TBP-binding protein (TAIR:AT2G45100.1); Has 20615 Blast hits to 13314 proteins in 1023 species: Archae - 483; Bacteria - 1191; Metazoa - 7169; Fungi - 2226; Plants - 882; Viruses - 261; Other Eukaryotes - 8403 (source: NCBI BLink). & (gnl|cdd|36811 : 316.0) no description available & (gnl|cdd|31595 : 142.0) no description available & (reliability: 832.0) & (original description: Putative BnaC04g00230D, Description = BnaC04g00230D protein, PFAM = PF07741;PF00382;PF00382)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold4265_16222-41131' '(at3g09360 : 416.0) Cyclin/Brf1-like TBP-binding protein; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, transcription activator activity, zinc ion binding, translation initiation factor activity; INVOLVED IN: translational initiation, positive regulation of transcription, regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Cyclin-like (InterPro:IPR011028), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-related (InterPro:IPR013763), Brf1-like TBP-binding (InterPro:IPR011665), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin/Brf1-like TBP-binding protein (TAIR:AT2G45100.1); Has 20615 Blast hits to 13314 proteins in 1023 species: Archae - 483; Bacteria - 1191; Metazoa - 7169; Fungi - 2226; Plants - 882; Viruses - 261; Other Eukaryotes - 8403 (source: NCBI BLink). & (gnl|cdd|36811 : 315.0) no description available & (gnl|cdd|31595 : 141.0) no description available & (reliability: 832.0) & (original description: Putative Os05g0305100, Description = Os05g0305100 protein, PFAM = PF00382;PF00382;PF07741)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold4265_20082-39513' '(at3g09360 : 310.0) Cyclin/Brf1-like TBP-binding protein; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, transcription activator activity, zinc ion binding, translation initiation factor activity; INVOLVED IN: translational initiation, positive regulation of transcription, regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Cyclin-like (InterPro:IPR011028), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-related (InterPro:IPR013763), Brf1-like TBP-binding (InterPro:IPR011665), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin/Brf1-like TBP-binding protein (TAIR:AT2G45100.1); Has 20615 Blast hits to 13314 proteins in 1023 species: Archae - 483; Bacteria - 1191; Metazoa - 7169; Fungi - 2226; Plants - 882; Viruses - 261; Other Eukaryotes - 8403 (source: NCBI BLink). & (gnl|cdd|36811 : 244.0) no description available & (gnl|cdd|31595 : 108.0) no description available & (reliability: 620.0) & (original description: Putative brf1, Description = Transcription factor IIIB 90 kDa subunit, PFAM = PF00382;PF00382;PF07741)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold4285_56621-69230' '(at1g03280 : 452.0) Transcription factor TFIIE, alpha subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription initiation factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: endomembrane system, transcription factor TFIIE complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIE, alpha subunit (InterPro:IPR002853), Transcription factor TFE/TFIIEalpha, HTH domain (InterPro:IPR017919); BEST Arabidopsis thaliana protein match is: Transcription factor TFIIE, alpha subunit (TAIR:AT4G20340.1); Has 759 Blast hits to 706 proteins in 191 species: Archae - 5; Bacteria - 10; Metazoa - 313; Fungi - 190; Plants - 108; Viruses - 11; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|37804 : 298.0) no description available & (gnl|cdd|47832 : 123.0) no description available & (reliability: 904.0) & (original description: Putative Os08g0343300, Description = Os08g0343300 protein, PFAM = PF02002)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold4421_89342-125425' '(q8l6j1|rpo3b_tobac : 267.0) DNA-directed RNA polymerase 3B, chloroplast precursor (EC 2.7.7.6) (T7 bacteriophage-type single subunit RNA polymerase 3B) (NictaRpoT3-tom) - Nicotiana tabacum (Common tobacco) & (at2g24120 : 236.0) SCABRA 3 (SCA3); FUNCTIONS IN: DNA-directed RNA polymerase activity, protein binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, bacteriophage type (InterPro:IPR002092); BEST Arabidopsis thaliana protein match is: male gametophyte defective 3 (TAIR:AT1G68990.1); Has 1200 Blast hits to 1186 proteins in 332 species: Archae - 0; Bacteria - 40; Metazoa - 130; Fungi - 220; Plants - 200; Viruses - 136; Other Eukaryotes - 474 (source: NCBI BLink). & (gnl|cdd|36256 : 217.0) no description available & (gnl|cdd|85138 : 156.0) no description available & (reliability: 472.0) & (original description: Putative rpmA, Description = DNA-directed RNA polymerase, PFAM = PF00940)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold4476_127797-165700' '(at1g54250 : 82.0) One of two highly similar proteins that can serve as non-catalytic subunits of Nuclear RNA polymerases II and V; homologous to budding yeast RPB8. Probably redundant with At3g59600.; NRPB8A; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase II, core complex; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), RNA polymerase, Rpb8 (InterPro:IPR005570); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb8 (TAIR:AT3G59600.1); Has 513 Blast hits to 511 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 205; Plants - 84; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|86462 : 81.2) no description available & (reliability: 164.0) & (original description: Putative , Description = , PFAM = PF03870)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold4617_264005-269492' '(at5g39840 : 1003.0) ATP-dependent RNA helicase, mitochondrial, putative; FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial (SUV3) (TAIR:AT4G14790.1); Has 4068 Blast hits to 4044 proteins in 754 species: Archae - 43; Bacteria - 1236; Metazoa - 267; Fungi - 388; Plants - 157; Viruses - 16; Other Eukaryotes - 1961 (source: NCBI BLink). & (gnl|cdd|36171 : 756.0) no description available & (reliability: 2006.0) & (original description: Putative dnc, Description = ATP-dependent RNA helicase SUPV3L1, mitochondrial, PFAM = PF12513;PF00271)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold4865_60273-66641' '(at4g13670 : 182.0) plastid transcriptionally active 5 (PTAC5); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, metabolic process; LOCATED IN: plastid chromosome, chloroplast thylakoid membrane, chloroplast, nucleoid, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan binding-like (InterPro:IPR002477), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 835 Blast hits to 827 proteins in 285 species: Archae - 9; Bacteria - 385; Metazoa - 155; Fungi - 28; Plants - 81; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative PTAC5, Description = At4g13670, PFAM = PF01471)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold5984_16293-41261' '(at1g29940 : 1668.0) Encodes a subunit of RNA polymerase 1 (aka RNA polymerase A).; nuclear RNA polymerase A2 (NRPA2); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase I, Rpa2 specific (InterPro:IPR009674), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C2 (TAIR:AT5G45140.1); Has 19116 Blast hits to 18561 proteins in 6776 species: Archae - 498; Bacteria - 7658; Metazoa - 537; Fungi - 3600; Plants - 1857; Viruses - 241; Other Eukaryotes - 4725 (source: NCBI BLink). & (gnl|cdd|35437 : 1419.0) no description available & (gnl|cdd|30434 : 611.0) no description available & (q85x54|rpob_pinko : 111.0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Pinus koraiensis (Korean pine) & (reliability: 3336.0) & (original description: Putative NRPA2, Description = DNA-directed RNA polymerase I subunit 2, PFAM = PF04565;PF00562;PF04560;PF04561;PF06883;PF04563)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold6085_33744-45807' '(at3g15390 : 216.0) Encodes a novel protein that is similar to PRL1 interacting factor and is involved in virus induced silencing.; silencing defective 5 (SDE5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: production of ta-siRNAs involved in RNA interference; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1771 (InterPro:IPR013899); BEST Arabidopsis thaliana protein match is: smr (Small MutS Related) domain-containing protein (TAIR:AT5G58720.1). & (reliability: 432.0) & (original description: Putative , Description = , PFAM = PF08590)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold7524_59511-65775' '(at3g46780 : 399.0) plastid transcriptionally active 16 (PTAC16); FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G18890.1); Has 1243 Blast hits to 1093 proteins in 359 species: Archae - 5; Bacteria - 555; Metazoa - 73; Fungi - 75; Plants - 168; Viruses - 22; Other Eukaryotes - 345 (source: NCBI BLink). & (gnl|cdd|36417 : 120.0) no description available & (reliability: 798.0) & (original description: Putative PTAC16, Description = Protein plastid transcriptionally active 16, chloroplastic, PFAM = PF13460)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold10083_3476-10716' '(gnl|cdd|35482 : 326.0) no description available & (at5g60040 : 287.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C1 (NRPC1); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), DNA-directed RNA polymerase III largest subunit (InterPro:IPR015700), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: RNA polymerase II large subunit (TAIR:AT4G35800.1). & (gnl|cdd|81352 : 180.0) no description available & (reliability: 574.0) & (original description: Putative rpc1, Description = DNA-directed RNA polymerase subunit, PFAM = PF04998)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold10564_1-3997' '(gnl|cdd|79237 : 1374.0) no description available & (q3c1g8|rpoc1_nicsy : 1344.0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) - Nicotiana sylvestris (Wood tobacco) & (atcg00180 : 1250.0) RNA polymerase beta' subunit-1; RPOC1; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: RNA elongation; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 (TAIR:AT5G60040.1). & (gnl|cdd|35481 : 173.0) no description available & (reliability: 2500.0) & (original description: Putative rpoC1, Description = DNA-directed RNA polymerase subunit beta', PFAM = PF04997;PF00623;PF00623;PF04983)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold10564_1287-4821' '(gnl|cdd|79225 : 533.0) no description available & (q8s8y1|rpoc2_atrbe : 468.0) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) - Atropa belladonna (Belladonna) (Deadly nightshade) & (atcg00170 : 457.0) RNA polymerase beta' subunit-2; RPOC2; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: RNA elongation; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), DNA-directed RNA polymerase, subunit beta'' (InterPro:IPR012756), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase A1 (TAIR:AT3G57660.1). & (gnl|cdd|35483 : 105.0) no description available & (reliability: 914.0) & (original description: Putative rpoC, Description = DNA-directed RNA polymerase subunit beta'', PFAM = PF04983;PF04983;PF04998;PF00623;PF05000)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold10564_2345-5690' '(gnl|cdd|79225 : 1019.0) no description available & (q3c1g9|rpoc2_nicsy : 912.0) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) - Nicotiana sylvestris (Wood tobacco) & (atcg00170 : 813.0) RNA polymerase beta' subunit-2; RPOC2; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: RNA elongation; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), DNA-directed RNA polymerase, subunit beta'' (InterPro:IPR012756), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase A1 (TAIR:AT3G57660.1). & (reliability: 1626.0) & (original description: Putative rpoC, Description = DNA-directed RNA polymerase subunit, PFAM = PF05000;PF04998)' T '27.2' 'RNA.transcription' 'nbv0.5scaffold10587_3348-6241' '(at3g23780 : 374.0) This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin.; nuclear RNA polymerase D2A (NRPD2A); CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D2B (TAIR:AT3G18090.1). & (gnl|cdd|35435 : 311.0) no description available & (gnl|cdd|73223 : 286.0) no description available & (q9tl06|rpob_nepol : 82.0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Nephroselmis olivacea & (reliability: 748.0) & (original description: Putative rpb2, Description = DNA-directed RNA polymerase subunit beta, PFAM = PF04560;PF00562;PF00562)' T '27.2' 'RNA.transcription' 'niben044scf00000673ctg001_595-6761' '(at2g40030 : 244.0) Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit. Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing.; nuclear RNA polymerase D1B (NRPD1B); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3223 (InterPro:IPR021602), RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D1A (TAIR:AT1G63020.2); Has 52919 Blast hits to 31940 proteins in 6835 species: Archae - 366; Bacteria - 10380; Metazoa - 13235; Fungi - 6920; Plants - 7147; Viruses - 757; Other Eukaryotes - 14114 (source: NCBI BLink). & (reliability: 488.0) & (original description: Putative RPE1, Description = DNA-directed RNA polymerase subunit, PFAM = PF11523)' T '27.2' 'RNA.transcription' 'niben044scf00000940ctg005_1368-8426' '(at3g52090 : 194.0) Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB11 and the E. oli RNA polymerase alpha subunit.; NRPB11; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex, DNA-directed RNA polymerase II, holoenzyme, DNA-directed RNA polymerase II, core complex, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site (InterPro:IPR008193), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025). & (gnl|cdd|39593 : 159.0) no description available & (reliability: 388.0) & (original description: Putative NRPB11, Description = DNA-directed RNA polymerases II, IV and V subunit 11, PFAM = PF13656)' T '27.2' 'RNA.transcription' 'niben044scf00001920ctg000_1219-10677' '(at1g17440 : 186.0) Encodes one of two Arabidopsis proteins with similarity to the TBP-associated factor TAF12. The gene product is an EIN3-interacting TFIID transcription factor required for proper ethylene response, including ERF1 induction. Loss of function mutants show enhanced response to ethylene. Located in nucleus and expressed throughout the plant. Required for ERF1 expression.; ENHANCED ETHYLENE RESPONSE 4 (EER4); FUNCTIONS IN: DNA binding, transcription initiation factor activity; INVOLVED IN: regulation of ethylene mediated signaling pathway, jasmonic acid mediated signaling pathway, transcription initiation; LOCATED IN: nucleus, transcription factor TFIID complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID (InterPro:IPR003228), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: TBP-associated factor 12 (TAIR:AT3G10070.1); Has 83508 Blast hits to 36935 proteins in 1541 species: Archae - 40; Bacteria - 5554; Metazoa - 31214; Fungi - 9645; Plants - 6795; Viruses - 322; Other Eukaryotes - 29938 (source: NCBI BLink). & (gnl|cdd|86457 : 112.0) no description available & (gnl|cdd|36357 : 88.2) no description available & (reliability: 372.0) & (original description: Putative taf12, Description = Transcription initiation factor TFIID subunit 12, PFAM = PF03847)' T '27.2' 'RNA.transcription' 'niben044scf00003670ctg000_948-10911' '(at5g49530 : 378.0) SIN-like family protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68376 : 287.0) no description available & (gnl|cdd|37565 : 160.0) no description available & (reliability: 756.0) & (original description: Putative PGSC0003DMG400004762, Description = DNA-directed RNA polymerase III subunit RPC5, PFAM = PF04801)' T '27.2' 'RNA.transcription' 'niben044scf00004369ctg025_1162-11506' '(at1g29940 : 588.0) Encodes a subunit of RNA polymerase 1 (aka RNA polymerase A).; nuclear RNA polymerase A2 (NRPA2); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase I, Rpa2 specific (InterPro:IPR009674), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C2 (TAIR:AT5G45140.1); Has 19116 Blast hits to 18561 proteins in 6776 species: Archae - 498; Bacteria - 7658; Metazoa - 537; Fungi - 3600; Plants - 1857; Viruses - 241; Other Eukaryotes - 4725 (source: NCBI BLink). & (gnl|cdd|35437 : 508.0) no description available & (gnl|cdd|30434 : 232.0) no description available & (reliability: 1176.0) & (original description: Putative rpa2, Description = DNA-directed RNA polymerase subunit beta, PFAM = PF00562;PF04560;PF06883;PF04565)' T '27.2' 'RNA.transcription' 'niben044scf00007491ctg003_10862-16233' '(at1g03280 : 160.0) Transcription factor TFIIE, alpha subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription initiation factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: endomembrane system, transcription factor TFIIE complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIE, alpha subunit (InterPro:IPR002853), Transcription factor TFE/TFIIEalpha, HTH domain (InterPro:IPR017919); BEST Arabidopsis thaliana protein match is: Transcription factor TFIIE, alpha subunit (TAIR:AT4G20340.1); Has 759 Blast hits to 706 proteins in 191 species: Archae - 5; Bacteria - 10; Metazoa - 313; Fungi - 190; Plants - 108; Viruses - 11; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|37804 : 113.0) no description available & (reliability: 320.0) & (original description: Putative RCOM_0387250, Description = Transcription initiation factor iie, alpha subunit, putative, PFAM = )' T '27.2' 'RNA.transcription' 'niben044scf00007491ctg004_515-4970' '(at1g03280 : 296.0) Transcription factor TFIIE, alpha subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription initiation factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: endomembrane system, transcription factor TFIIE complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIE, alpha subunit (InterPro:IPR002853), Transcription factor TFE/TFIIEalpha, HTH domain (InterPro:IPR017919); BEST Arabidopsis thaliana protein match is: Transcription factor TFIIE, alpha subunit (TAIR:AT4G20340.1); Has 759 Blast hits to 706 proteins in 191 species: Archae - 5; Bacteria - 10; Metazoa - 313; Fungi - 190; Plants - 108; Viruses - 11; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|37804 : 187.0) no description available & (gnl|cdd|47832 : 116.0) no description available & (reliability: 592.0) & (original description: Putative glysoja_049822, Description = General transcription factor IIE subunit 1, PFAM = PF02002)' T '27.2' 'RNA.transcription' 'niben044scf00007554ctg001_9725-17104' '(at3g23590 : 1048.0) REF4-related 1 (RFR1); BEST Arabidopsis thaliana protein match is: reduced epidermal fluorescence 4 (TAIR:AT2G48110.1); Has 143 Blast hits to 139 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 2096.0) & (original description: Putative Med5b, Description = Mediator of RNA polymerase II transcription subunit 5-like protein, PFAM = )' T '27.2' 'RNA.transcription' 'niben044scf00008103ctg013_1287-34753' '(gnl|cdd|35482 : 1515.0) no description available & (at5g60040 : 1464.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C1 (NRPC1); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), DNA-directed RNA polymerase III largest subunit (InterPro:IPR015700), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: RNA polymerase II large subunit (TAIR:AT4G35800.1). & (gnl|cdd|82682 : 648.0) no description available & (q8wi25|rpoc1_psinu : 94.4) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) - Psilotum nudum (Whisk fern) & (reliability: 2928.0) & (original description: Putative NRPC1, Description = DNA-directed RNA polymerase III subunit 1, PFAM = PF04983;PF05000;PF04997;PF00623;PF04998)' T '27.2' 'RNA.transcription' 'niben044scf00008103ctg013_7006-15162' '(gnl|cdd|35482 : 592.0) no description available & (at5g60040 : 547.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C1 (NRPC1); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), DNA-directed RNA polymerase III largest subunit (InterPro:IPR015700), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: RNA polymerase II large subunit (TAIR:AT4G35800.1). & (gnl|cdd|82682 : 268.0) no description available & (reliability: 1094.0) & (original description: Putative rpc1, Description = DNA-directed RNA polymerase subunit, PFAM = PF04998;PF05000)' T '27.2' 'RNA.transcription' 'niben044scf00008103ctg014_1-3948' '(at5g60040 : 228.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C1 (NRPC1); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), DNA-directed RNA polymerase III largest subunit (InterPro:IPR015700), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: RNA polymerase II large subunit (TAIR:AT4G35800.1). & (gnl|cdd|35482 : 198.0) no description available & (gnl|cdd|86768 : 130.0) no description available & (reliability: 456.0) & (original description: Putative RPC1, Description = DNA-directed RNA polymerase subunit, PFAM = PF04997)' T '27.2' 'RNA.transcription' 'niben044scf00009304ctg008_2592-10634' '(at4g10070 : 274.0) KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein (TAIR:AT1G33680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36889 : 138.0) no description available & (reliability: 548.0) & (original description: Putative F14M2.18, Description = F14M2.18 protein, PFAM = PF00013;PF00013)' T '27.2' 'RNA.transcription' 'niben044scf00010125ctg001_19963-29448' '(at4g35800 : 2739.0) Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit.; RNA polymerase II large subunit (NRPB1); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription, transcription from RNA polymerase II promoter; LOCATED IN: nucleus, chloroplast, DNA-directed RNA polymerase II, core complex, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase II, heptapeptide repeat, eukaryotic (InterPro:IPR000684), RNA polymerase Rpb1, domain 7 (InterPro:IPR007073), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 6 (InterPro:IPR007075); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 (TAIR:AT5G60040.1); Has 181834 Blast hits to 82224 proteins in 9254 species: Archae - 731; Bacteria - 33255; Metazoa - 56600; Fungi - 34284; Plants - 19037; Viruses - 3576; Other Eukaryotes - 34351 (source: NCBI BLink). & (gnl|cdd|35481 : 2318.0) no description available & (gnl|cdd|82682 : 947.0) no description available & (q9tl05|rpoc1_nepol : 143.0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) - Nephroselmis olivacea & (reliability: 5478.0) & (original description: Putative NRPB1, Description = DNA-directed RNA polymerase II subunit 1, PFAM = PF04998;PF05000;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF04983;PF04992;PF04990;PF04997;PF00623)' T '27.2' 'RNA.transcription' 'niben044scf00010383ctg018_21971-33213' '(at1g54250 : 80.9) One of two highly similar proteins that can serve as non-catalytic subunits of Nuclear RNA polymerases II and V; homologous to budding yeast RPB8. Probably redundant with At3g59600.; NRPB8A; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase II, core complex; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), RNA polymerase, Rpb8 (InterPro:IPR005570); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb8 (TAIR:AT3G59600.1); Has 513 Blast hits to 511 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 205; Plants - 84; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|86462 : 80.4) no description available & (reliability: 161.8) & (original description: Putative , Description = , PFAM = PF03870)' T '27.2' 'RNA.transcription' 'niben044scf00010903ctg011_2456-12886' '(gnl|cdd|69325 : 221.0) no description available & (gnl|cdd|37604 : 192.0) no description available & (at4g12610 : 122.0) RAP74; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription initiation factor activity, DNA binding, transcription activator activity, catalytic activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter, positive regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: shoot, root, guard cell; CONTAINS InterPro DOMAIN/s: Transcription initiation factor IIF, alpha subunit (InterPro:IPR008851), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039); Has 34394 Blast hits to 22751 proteins in 1168 species: Archae - 120; Bacteria - 4390; Metazoa - 12539; Fungi - 6082; Plants - 2082; Viruses - 445; Other Eukaryotes - 8736 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative RAP74, Description = Transcription initiation factor IIF subunit alpha, PFAM = PF05793;PF05793)' T '27.2' 'RNA.transcription' 'niben044scf00011134ctg025_1-4976' '(at2g40030 : 123.0) Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit. Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing.; nuclear RNA polymerase D1B (NRPD1B); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3223 (InterPro:IPR021602), RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D1A (TAIR:AT1G63020.2); Has 52919 Blast hits to 31940 proteins in 6835 species: Archae - 366; Bacteria - 10380; Metazoa - 13235; Fungi - 6920; Plants - 7147; Viruses - 757; Other Eukaryotes - 14114 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative DMS5, Description = DNA-directed RNA polymerase subunit, PFAM = PF11523)' T '27.2' 'RNA.transcription' 'niben044scf00011699ctg008_1-11571' '(at5g60040 : 267.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C1 (NRPC1); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), DNA-directed RNA polymerase III largest subunit (InterPro:IPR015700), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: RNA polymerase II large subunit (TAIR:AT4G35800.1). & (gnl|cdd|35482 : 239.0) no description available & (gnl|cdd|86768 : 139.0) no description available & (reliability: 534.0) & (original description: Putative RPC1, Description = DNA-directed RNA polymerase subunit, PFAM = PF04997)' T '27.2' 'RNA.transcription' 'niben044scf00011797ctg006_437-5775' '(at1g60620 : 488.0) RNA polymerase I subunit 43 (RPAC43); FUNCTIONS IN: DNA-directed RNA polymerase activity, protein dimerization activity, DNA binding; INVOLVED IN: transcription; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, insert domain (InterPro:IPR011262), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RpoA/D/Rpb3-type (InterPro:IPR011263), DNA-directed RNA polymerase, 30-40kDa subunit, conserved site (InterPro:IPR001514), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT1G60850.1); Has 1342 Blast hits to 1342 proteins in 354 species: Archae - 247; Bacteria - 1; Metazoa - 281; Fungi - 345; Plants - 107; Viruses - 0; Other Eukaryotes - 361 (source: NCBI BLink). & (gnl|cdd|36734 : 428.0) no description available & (gnl|cdd|47937 : 213.0) no description available & (reliability: 976.0) & (original description: Putative rpa5, Description = RNA polymerase III subunit, PFAM = PF01193;PF01000)' T '27.2' 'RNA.transcription' 'niben044scf00013449ctg003_4369-12056' '(at4g10070 : 296.0) KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein (TAIR:AT1G33680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36889 : 134.0) no description available & (reliability: 592.0) & (original description: Putative At1g33680, Description = KH domain-containing protein, PFAM = PF00013;PF00013)' T '27.2' 'RNA.transcription' 'niben044scf00013961ctg001_1-5192' '(at1g26665 : 176.0) Mediator complex, subunit Med10; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med10 (InterPro:IPR019145); BEST Arabidopsis thaliana protein match is: Mediator complex, subunit Med10 (TAIR:AT5G41910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38256 : 164.0) no description available & (reliability: 320.0) & (original description: Putative MED10B, Description = Mediator of RNA polymerase II transcription subunit 10b, PFAM = PF09748)' T '27.2' 'RNA.transcription' 'niben044scf00029082ctg002_3913-11931' '(at1g63020 : 866.0) Encodes one of two alternative largest subunits of a putative plant-specific RNA polymerase IV (aka RNA polymerase D). Required for posttranscriptional gene silencing.; nuclear RNA polymerase D1A (NRPD1A); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: in 7 processes; LOCATED IN: nucleus, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083), Protein of unknown function DUF3223 (InterPro:IPR021602), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D1B (TAIR:AT2G40030.1). & (gnl|cdd|35481 : 546.0) no description available & (gnl|cdd|82682 : 242.0) no description available & (reliability: 1732.0) & (original description: Putative BnaC09g51200D, Description = DNA-directed RNA polymerase subunit, PFAM = PF00623;PF04997;PF04983;PF05000)' T '27.2' 'RNA.transcription' 'niben044scf00032196ctg002_3895-9374' '(at4g36650 : 541.0) Encodes a protein with similarity to the general transcription factor TFIIB. pBRP binds rDNA sequences in vitro. pBRP has been localized to the outer face of the plastid membrane with GFP fusion however, under conditions of proteosome inhibition it is found in the nucleus.; plant-specific TFIIB-related protein (PBRP); FUNCTIONS IN: RNA polymerase II transcription factor activity, rDNA binding; INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: plastid outer membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: transcription factor IIB (TAIR:AT2G41630.1); Has 1297 Blast hits to 1296 proteins in 319 species: Archae - 504; Bacteria - 1; Metazoa - 214; Fungi - 180; Plants - 140; Viruses - 3; Other Eukaryotes - 255 (source: NCBI BLink). & (gnl|cdd|36810 : 307.0) no description available & (gnl|cdd|31595 : 140.0) no description available & (q8w0w3|tf2b_orysa : 93.2) Transcription initiation factor IIB (General transcription factor TFIIB) - Oryza sativa (Rice) & (reliability: 1082.0) & (original description: Putative pBrp, Description = TFIIB-related protein, PFAM = PF00382;PF00382)' T '27.2' 'RNA.transcription' 'niben044scf00035246ctg002_4797-7738' '(at3g22320 : 226.0) Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV; homologous to budding yeast RPB5.; NRPB5; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase II, core complex, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, Rpb5, N-terminal (InterPro:IPR005571), RNA polymerase, subunit H/Rpb5 C-terminal (InterPro:IPR000783), DNA-directed RNA polymerase, RPB5 subunit (InterPro:IPR014381), RNA polymerase, subunit H/Rpb5, conserved site (InterPro:IPR020608); BEST Arabidopsis thaliana protein match is: RNA polymerase II fifth largest subunit, C (TAIR:AT5G57980.1); Has 1046 Blast hits to 1046 proteins in 368 species: Archae - 260; Bacteria - 0; Metazoa - 162; Fungi - 216; Plants - 118; Viruses - 20; Other Eukaryotes - 270 (source: NCBI BLink). & (gnl|cdd|38428 : 204.0) no description available & (gnl|cdd|65020 : 92.6) no description available & (reliability: 452.0) & (original description: Putative POLR2E, Description = DNA-directed RNA polymerases I, II, and III subunit RPABC1, PFAM = PF01191;PF03871)' T '27.2' 'RNA.transcription' 'niben044scf00043672ctg001_1-8939' '(q8l6j5|rpo1b_tobac : 1050.0) DNA-directed RNA polymerase 1B, mitochondrial precursor (EC 2.7.7.6) (T7 bacteriophage-type single subunit RNA polymerase 1B) (NictaRpoT1-tom) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36256 : 882.0) no description available & (at5g15700 : 868.0) Nucleus encoded plastid RNA polymerase. Localized in mitochondria and chloroplast.; DNA/RNA polymerases superfamily protein; FUNCTIONS IN: RNA polymerase activity, DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: mitochondrion, chloroplast, thylakoid membrane; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, bacteriophage type (InterPro:IPR002092); BEST Arabidopsis thaliana protein match is: male gametophyte defective 3 (TAIR:AT1G68990.1). & (gnl|cdd|34711 : 539.0) no description available & (reliability: 1736.0) & (original description: Putative NEP, Description = DNA-directed RNA polymerase, PFAM = PF00940)' T '27.2' 'RNA.transcription' 'niben044scf00046031ctg004_1-3754' '(at4g21710 : 705.0) Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit.; NRPB2; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C2 (TAIR:AT5G45140.1); Has 37546 Blast hits to 27868 proteins in 9192 species: Archae - 496; Bacteria - 17572; Metazoa - 623; Fungi - 7193; Plants - 3397; Viruses - 232; Other Eukaryotes - 8033 (source: NCBI BLink). & (gnl|cdd|35435 : 506.0) no description available & (gnl|cdd|86686 : 306.0) no description available & (reliability: 1410.0) & (original description: Putative polr2b, Description = Polr2b protein, PFAM = PF04561;PF04563)' T '27.2' 'RNA.transcription' 'niben044scf00048158ctg009_375-2926' '(at4g14660 : 266.0) Non-catalytic subunit specific to DNA-directed RNA polymerase V; homologous to budding yeast RPB7; NRPE7; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), RNA polymerase Rpb7, N-terminal (InterPro:IPR005576); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb7-like, N-terminal domain (TAIR:AT3G22900.1); Has 678 Blast hits to 678 proteins in 287 species: Archae - 183; Bacteria - 0; Metazoa - 137; Fungi - 169; Plants - 112; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|38508 : 185.0) no description available & (gnl|cdd|31292 : 89.5) no description available & (p46279|rpb7_soybn : 86.7) DNA-directed RNA polymerase II 19 kDa polypeptide (EC 2.7.7.6) (RNA polymerase II subunit 5) - Glycine max (Soybean) & (reliability: 532.0) & (original description: Putative NRPE7, Description = DNA-directed RNA polymerase V subunit 7, PFAM = PF03876)' T '27.2' 'RNA.transcription' 'niben044scf00052083ctg000_6254-13019' '(at4g31720 : 188.0) Arabidopsis thaliana putative TBP-associated 15 kDa subunit protein (TAFII15); TBP-associated factor II 15 (TAFII15); FUNCTIONS IN: RNA polymerase II transcription factor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID, 23-30kDa subunit (InterPro:IPR003923); Has 372 Blast hits to 372 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 132; Plants - 56; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|38633 : 137.0) no description available & (gnl|cdd|34763 : 87.1) no description available & (reliability: 376.0) & (original description: Putative TAF10, Description = Transcription initiation factor TFIID subunit 10, PFAM = PF03540)' T '27.2' 'RNA.transcription' 'niben044scf00054892ctg001_9653-15284' '(at4g20280 : 181.0) Encodes TAF11, a putative TBP-associated factor (TBP: TATA binding protein).; TBP-associated factor 11 (TAF11); FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription initiation factor activity, DNA binding; INVOLVED IN: transcription initiation from RNA polymerase II promoter, transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TAFII28-like protein (InterPro:IPR006809), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: TBP-associated factor 11B (TAIR:AT1G20000.1); Has 444 Blast hits to 437 proteins in 151 species: Archae - 0; Bacteria - 0; Metazoa - 211; Fungi - 119; Plants - 66; Viruses - 2; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|38429 : 133.0) no description available & (gnl|cdd|68297 : 121.0) no description available & (reliability: 362.0) & (original description: Putative TAF11B, Description = Transcription initiation factor TFIID subunit 11b, PFAM = PF04719)' T '27.2' 'RNA.transcription' 'niben101scf00043_129393-139709' '(at4g20280 : 182.0) Encodes TAF11, a putative TBP-associated factor (TBP: TATA binding protein).; TBP-associated factor 11 (TAF11); FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription initiation factor activity, DNA binding; INVOLVED IN: transcription initiation from RNA polymerase II promoter, transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TAFII28-like protein (InterPro:IPR006809), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: TBP-associated factor 11B (TAIR:AT1G20000.1); Has 444 Blast hits to 437 proteins in 151 species: Archae - 0; Bacteria - 0; Metazoa - 211; Fungi - 119; Plants - 66; Viruses - 2; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|38429 : 127.0) no description available & (gnl|cdd|68297 : 122.0) no description available & (reliability: 364.0) & (original description: Putative TAF11, Description = Transcription initiation factor TFIID subunit 11, PFAM = PF04719)' T '27.2' 'RNA.transcription' 'niben101scf00201_194704-218697' '(at3g09360 : 434.0) Cyclin/Brf1-like TBP-binding protein; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, transcription activator activity, zinc ion binding, translation initiation factor activity; INVOLVED IN: translational initiation, positive regulation of transcription, regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Cyclin-like (InterPro:IPR011028), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-related (InterPro:IPR013763), Brf1-like TBP-binding (InterPro:IPR011665), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin/Brf1-like TBP-binding protein (TAIR:AT2G45100.1); Has 20615 Blast hits to 13314 proteins in 1023 species: Archae - 483; Bacteria - 1191; Metazoa - 7169; Fungi - 2226; Plants - 882; Viruses - 261; Other Eukaryotes - 8403 (source: NCBI BLink). & (gnl|cdd|36811 : 316.0) no description available & (gnl|cdd|31595 : 149.0) no description available & (reliability: 868.0) & (original description: Putative brf1, Description = Transcription factor IIIB 90 kDa subunit, PFAM = PF00382;PF00382;PF07741)' T '27.2' 'RNA.transcription' 'niben101scf00258_192139-197319' '(at5g39840 : 1016.0) ATP-dependent RNA helicase, mitochondrial, putative; FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial (SUV3) (TAIR:AT4G14790.1); Has 4068 Blast hits to 4044 proteins in 754 species: Archae - 43; Bacteria - 1236; Metazoa - 267; Fungi - 388; Plants - 157; Viruses - 16; Other Eukaryotes - 1961 (source: NCBI BLink). & (gnl|cdd|36171 : 756.0) no description available & (reliability: 2032.0) & (original description: Putative dnc, Description = ATP-dependent RNA helicase SUPV3L1, mitochondrial, PFAM = PF12513;PF00271)' T '27.2' 'RNA.transcription' 'niben101scf00375_150544-161389' '(at3g10070 : 198.0) Encodes one of two Arabidopsis proteins with similarity to the TBP-associated factor TAF12.; TBP-associated factor 12 (TAF12); FUNCTIONS IN: DNA binding, transcription initiation factor activity; INVOLVED IN: transcription initiation; LOCATED IN: chloroplast, transcription factor TFIID complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID (InterPro:IPR003228), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: Transcription initiation factor TFIID subunit A (TAIR:AT1G17440.2); Has 50598 Blast hits to 32470 proteins in 1374 species: Archae - 31; Bacteria - 3770; Metazoa - 21452; Fungi - 11498; Plants - 4385; Viruses - 864; Other Eukaryotes - 8598 (source: NCBI BLink). & (gnl|cdd|86457 : 124.0) no description available & (gnl|cdd|36357 : 112.0) no description available & (reliability: 396.0) & (original description: Putative TAF12, Description = Transcription initiation factor TFIID subunit 12, PFAM = PF03847)' T '27.2' 'RNA.transcription' 'niben101scf00414_880236-884939' '(at1g60620 : 439.0) RNA polymerase I subunit 43 (RPAC43); FUNCTIONS IN: DNA-directed RNA polymerase activity, protein dimerization activity, DNA binding; INVOLVED IN: transcription; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, insert domain (InterPro:IPR011262), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RpoA/D/Rpb3-type (InterPro:IPR011263), DNA-directed RNA polymerase, 30-40kDa subunit, conserved site (InterPro:IPR001514), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT1G60850.1); Has 1342 Blast hits to 1342 proteins in 354 species: Archae - 247; Bacteria - 1; Metazoa - 281; Fungi - 345; Plants - 107; Viruses - 0; Other Eukaryotes - 361 (source: NCBI BLink). & (gnl|cdd|36734 : 385.0) no description available & (gnl|cdd|47937 : 178.0) no description available & (reliability: 878.0) & (original description: Putative Polr1c, Description = DNA-directed RNA polymerases I and III subunit RPAC1, PFAM = PF01000;PF01193)' T '27.2' 'RNA.transcription' 'niben101scf00426_224476-234527' '(gnl|cdd|69325 : 214.0) no description available & (gnl|cdd|37604 : 186.0) no description available & (at4g12610 : 120.0) RAP74; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription initiation factor activity, DNA binding, transcription activator activity, catalytic activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter, positive regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: shoot, root, guard cell; CONTAINS InterPro DOMAIN/s: Transcription initiation factor IIF, alpha subunit (InterPro:IPR008851), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039); Has 34394 Blast hits to 22751 proteins in 1168 species: Archae - 120; Bacteria - 4390; Metazoa - 12539; Fungi - 6082; Plants - 2082; Viruses - 445; Other Eukaryotes - 8736 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative RAP74, Description = Transcription initiation factor IIF subunit alpha, PFAM = PF05793;PF05793)' T '27.2' 'RNA.transcription' 'niben101scf00492_15863-21985' '(at3g10330 : 463.0) Cyclin-like family protein; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, zinc ion binding, translation initiation factor activity; INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation, regulation of transcription; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Cyclin-like (InterPro:IPR011028), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-related (InterPro:IPR013763), Zinc finger, TFIIB-type (InterPro:IPR013137), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: transcription factor IIB (TAIR:AT2G41630.1); Has 1989 Blast hits to 1976 proteins in 358 species: Archae - 539; Bacteria - 1; Metazoa - 303; Fungi - 308; Plants - 195; Viruses - 12; Other Eukaryotes - 631 (source: NCBI BLink). & (p48513|tf2b_soybn : 458.0) Transcription initiation factor IIB (General transcription factor TFIIB) - Glycine max (Soybean) & (gnl|cdd|36810 : 371.0) no description available & (gnl|cdd|31595 : 207.0) no description available & (reliability: 926.0) & (original description: Putative TFIIB1, Description = Transcription initiation factor IIB, PFAM = PF00382;PF00382;PF08271)' T '27.2' 'RNA.transcription' 'niben101scf00542_502978-508391' '(at5g39840 : 1013.0) ATP-dependent RNA helicase, mitochondrial, putative; FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial (SUV3) (TAIR:AT4G14790.1); Has 4068 Blast hits to 4044 proteins in 754 species: Archae - 43; Bacteria - 1236; Metazoa - 267; Fungi - 388; Plants - 157; Viruses - 16; Other Eukaryotes - 1961 (source: NCBI BLink). & (gnl|cdd|36171 : 751.0) no description available & (reliability: 2026.0) & (original description: Putative dnc, Description = ATP-dependent RNA helicase SUPV3L1, mitochondrial, PFAM = PF00271;PF12513)' T '27.2' 'RNA.transcription' 'niben101scf00626_138676-159925' '(at3g49000 : 313.0) RNA polymerase III subunit RPC82 family protein; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase III subunit RPC82-related, helix-turn-helix (InterPro:IPR013197), RNA polymerase III Rpc82, C -terminal (InterPro:IPR008806); Has 265 Blast hits to 257 proteins in 119 species: Archae - 0; Bacteria - 2; Metazoa - 106; Fungi - 69; Plants - 57; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|37798 : 185.0) no description available & (gnl|cdd|69183 : 124.0) no description available & (reliability: 626.0) & (original description: Putative BnaC03g52680D, Description = BnaC03g52680D protein, PFAM = PF08221;PF05645)' T '27.2' 'RNA.transcription' 'niben101scf00630_494316-502173' '(at1g54250 : 180.0) One of two highly similar proteins that can serve as non-catalytic subunits of Nuclear RNA polymerases II and V; homologous to budding yeast RPB8. Probably redundant with At3g59600.; NRPB8A; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase II, core complex; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), RNA polymerase, Rpb8 (InterPro:IPR005570); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb8 (TAIR:AT3G59600.1); Has 513 Blast hits to 511 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 205; Plants - 84; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|38610 : 159.0) no description available & (gnl|cdd|86462 : 154.0) no description available & (reliability: 360.0) & (original description: Putative NRPB8B, Description = DNA-directed RNA polymerases II, IV and V subunit 8B, PFAM = PF03870)' T '27.2' 'RNA.transcription' 'niben101scf00662_134719-139858' '(q3c1g9|rpoc2_nicsy : 1280.0) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|79225 : 1218.0) no description available & (atcg00170 : 1010.0) RNA polymerase beta' subunit-2; RPOC2; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: RNA elongation; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), DNA-directed RNA polymerase, subunit beta'' (InterPro:IPR012756), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase A1 (TAIR:AT3G57660.1). & (reliability: 2020.0) & (original description: Putative rpoC, Description = DNA-directed RNA polymerase subunit beta'', PFAM = PF04998)' T '27.2' 'RNA.transcription' 'niben101scf00713_302215-307324' '(at5g51940 : 164.0) One of two highly similar proteins that can serve as a non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB6 and the E. coli RNA polymerase omega subunit. Probably redundant with At2g04630.; NRPB6A; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription, DNA-dependent; LOCATED IN: DNA-directed RNA polymerase V complex, DNA-directed RNA polymerase II, core complex, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, 14-18kDa subunit, conserved site (InterPro:IPR020708), RNA polymerase subunit, RPB6/omega (InterPro:IPR012293), RNA polymerase Rpb6 (InterPro:IPR006110), DNA-directed RNA polymerase, 14-18kDa subunit (InterPro:IPR006111); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb6 (TAIR:AT2G04630.1); Has 907 Blast hits to 906 proteins in 313 species: Archae - 223; Bacteria - 0; Metazoa - 99; Fungi - 194; Plants - 79; Viruses - 16; Other Eukaryotes - 296 (source: NCBI BLink). & (gnl|cdd|38615 : 145.0) no description available & (reliability: 328.0) & (original description: Putative pol, Description = DNA-directed RNA polymerase IIa, PFAM = PF01192)' T '27.2' 'RNA.transcription' 'niben101scf00747_414231-419158' '(at1g17440 : 162.0) Encodes one of two Arabidopsis proteins with similarity to the TBP-associated factor TAF12. The gene product is an EIN3-interacting TFIID transcription factor required for proper ethylene response, including ERF1 induction. Loss of function mutants show enhanced response to ethylene. Located in nucleus and expressed throughout the plant. Required for ERF1 expression.; ENHANCED ETHYLENE RESPONSE 4 (EER4); FUNCTIONS IN: DNA binding, transcription initiation factor activity; INVOLVED IN: regulation of ethylene mediated signaling pathway, jasmonic acid mediated signaling pathway, transcription initiation; LOCATED IN: nucleus, transcription factor TFIID complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID (InterPro:IPR003228), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: TBP-associated factor 12 (TAIR:AT3G10070.1); Has 83508 Blast hits to 36935 proteins in 1541 species: Archae - 40; Bacteria - 5554; Metazoa - 31214; Fungi - 9645; Plants - 6795; Viruses - 322; Other Eukaryotes - 29938 (source: NCBI BLink). & (gnl|cdd|36357 : 119.0) no description available & (gnl|cdd|86457 : 106.0) no description available & (reliability: 324.0) & (original description: Putative taf12, Description = Transcription initiation factor TFIID subunit 12, PFAM = PF03847)' T '27.2' 'RNA.transcription' 'niben101scf00765_197865-207205' '(gnl|cdd|86462 : 91.9) no description available & (at3g59600 : 91.3) One of two highly similar proteins that can serve as non-catalytic subunits of Nuclear RNA polymerases II, IV and V; homologous to budding yeast RPB8. Probably redundant with At1g54250.; NRPB8B; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase II, core complex; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), RNA polymerase, Rpb8 (InterPro:IPR005570); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb8 (TAIR:AT1G54250.1); Has 513 Blast hits to 511 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 205; Plants - 84; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|38610 : 86.9) no description available & (reliability: 182.6) & (original description: Putative , Description = , PFAM = PF03870)' T '27.2' 'RNA.transcription' 'niben101scf00765_225169-230539' '(gnl|cdd|38610 : 126.0) no description available & (gnl|cdd|86462 : 126.0) no description available & (at3g59600 : 115.0) One of two highly similar proteins that can serve as non-catalytic subunits of Nuclear RNA polymerases II, IV and V; homologous to budding yeast RPB8. Probably redundant with At1g54250.; NRPB8B; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase II, core complex; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), RNA polymerase, Rpb8 (InterPro:IPR005570); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb8 (TAIR:AT1G54250.1); Has 513 Blast hits to 511 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 205; Plants - 84; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative RPB, Description = Nucleic acid-binding, OB-fold, PFAM = PF03870)' T '27.2' 'RNA.transcription' 'niben101scf01102_322876-359877' '(at2g40030 : 1612.0) Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit. Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing.; nuclear RNA polymerase D1B (NRPD1B); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3223 (InterPro:IPR021602), RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D1A (TAIR:AT1G63020.2); Has 52919 Blast hits to 31940 proteins in 6835 species: Archae - 366; Bacteria - 10380; Metazoa - 13235; Fungi - 6920; Plants - 7147; Viruses - 757; Other Eukaryotes - 14114 (source: NCBI BLink). & (gnl|cdd|35481 : 705.0) no description available & (gnl|cdd|82682 : 253.0) no description available & (reliability: 3224.0) & (original description: Putative NRPE1, Description = DNA-directed RNA polymerase V subunit 1, PFAM = PF04983;PF04997;PF11523;PF00623;PF04998)' T '27.2' 'RNA.transcription' 'niben101scf01267_1018980-1027327' '(at5g43130 : 267.0) TBP-associated factor 4 (TAF4); FUNCTIONS IN: transcription initiation factor activity; INVOLVED IN: transcription initiation; LOCATED IN: transcription factor TFIID complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID component TAF4 (InterPro:IPR007900), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: TBP-associated factor 4B (TAIR:AT1G27720.1). & (gnl|cdd|86833 : 152.0) no description available & (gnl|cdd|37552 : 84.8) no description available & (reliability: 534.0) & (original description: Putative BnaC04g17340D, Description = BnaC04g17340D protein, PFAM = PF05236)' T '27.2' 'RNA.transcription' 'niben101scf01304_1379778-1394275' '(at3g21350 : 282.0) MED6; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med6 (InterPro:IPR007018), Mediator complex, subunit Med6, metazoa/plant (InterPro:IPR016820); Has 341 Blast hits to 341 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 132; Plants - 38; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|38379 : 124.0) no description available & (gnl|cdd|68505 : 109.0) no description available & (reliability: 564.0) & (original description: Putative Med6, Description = Mediator of RNA polymerase II transcription subunit 6, PFAM = PF04934)' T '27.2' 'RNA.transcription' 'niben101scf01437_1417-18226' '(at3g23780 : 1587.0) This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin.; nuclear RNA polymerase D2A (NRPD2A); CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D2B (TAIR:AT3G18090.1). & (gnl|cdd|35435 : 1170.0) no description available & (gnl|cdd|82681 : 693.0) no description available & (p56299|rpob_chlvu : 130.0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Chlorella vulgaris (Green alga) & (reliability: 3174.0) & (original description: Putative NRPD2, Description = DNA-directed RNA polymerases IV and V subunit 2, PFAM = PF04566;PF04567;PF00562;PF04561;PF04565;PF04560;PF04563)' T '27.2' 'RNA.transcription' 'niben101scf01509_182663-206105' '(at3g23590 : 1097.0) REF4-related 1 (RFR1); BEST Arabidopsis thaliana protein match is: reduced epidermal fluorescence 4 (TAIR:AT2G48110.1); Has 143 Blast hits to 139 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 2194.0) & (original description: Putative BnaC04g51780D, Description = BnaC04g51780D protein, PFAM = )' T '27.2' 'RNA.transcription' 'niben101scf01687_1216073-1218376' '(gnl|cdd|79225 : 127.0) no description available & (q9mtm3|rpoc2_oenho : 111.0) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) - Oenothera hookeri (Hooker's evening primrose) & (atcg00170 : 110.0) RNA polymerase beta' subunit-2; RPOC2; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: RNA elongation; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), DNA-directed RNA polymerase, subunit beta'' (InterPro:IPR012756), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase A1 (TAIR:AT3G57660.1). & (reliability: 220.0) & (original description: Putative rpoC, Description = DNA-directed RNA polymerase subunit, PFAM = )' T '27.2' 'RNA.transcription' 'niben101scf01721_1095253-1101823' '(at4g31720 : 147.0) Arabidopsis thaliana putative TBP-associated 15 kDa subunit protein (TAFII15); TBP-associated factor II 15 (TAFII15); FUNCTIONS IN: RNA polymerase II transcription factor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID, 23-30kDa subunit (InterPro:IPR003923); Has 372 Blast hits to 372 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 132; Plants - 56; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|38633 : 133.0) no description available & (gnl|cdd|67175 : 83.1) no description available & (reliability: 294.0) & (original description: Putative TAF10, Description = Transcription initiation factor TFIID subunit 10, PFAM = PF03540)' T '27.2' 'RNA.transcription' 'niben101scf01797_177461-185634' '(at1g14790 : 1414.0) Encodes RNA-dependent RNA polymerase. While not required for virus-induced post-transcriptional gene silencing (PTGS), it can promote turnover of viral RNAs in infected plants. Nomenclature according to Xie, et al. (2004). Involved in the production of Cucumber Mosaic Virus siRNAs.; RNA-dependent RNA polymerase 1 (RDR1); CONTAINS InterPro DOMAIN/s: RNA-dependent RNA polymerase, eukaryotic-type (InterPro:IPR007855); BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase 2 (TAIR:AT4G11130.1); Has 638 Blast hits to 623 proteins in 115 species: Archae - 0; Bacteria - 2; Metazoa - 73; Fungi - 286; Plants - 205; Viruses - 2; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36206 : 878.0) no description available & (gnl|cdd|68744 : 516.0) no description available & (reliability: 2828.0) & (original description: Putative RDR1, Description = RNA-dependent RNA polymerase 1, PFAM = PF05183)' T '27.2' 'RNA.transcription' 'niben101scf02015_574995-579276' '(p93348|tbp_tobac : 394.0) TATA-box-binding protein (TATA-box factor) (TATA-binding factor) (TATA sequence-binding protein) (TBP) (Transcription initiation factor TFIID TBP subunit) - Nicotiana tabacum (Common tobacco) & (at1g55520 : 365.0) TATA-box binding protein. Required for basal transcription. Acts facilitating the recruitment of TFIID to the promoter, which together with the RNA polymerase form the preinitiation complex.; TATA binding protein 2 (TBP2); CONTAINS InterPro DOMAIN/s: TATA-box binding (InterPro:IPR000814), Beta2-adaptin/TATA-box binding, C-terminal (InterPro:IPR012295), Transcription factor TFIID, C-terminal/DNA glycosylase, N-terminal (InterPro:IPR012294); BEST Arabidopsis thaliana protein match is: TATA binding protein 1 (TAIR:AT3G13445.1); Has 2123 Blast hits to 1580 proteins in 405 species: Archae - 736; Bacteria - 0; Metazoa - 578; Fungi - 191; Plants - 155; Viruses - 0; Other Eukaryotes - 463 (source: NCBI BLink). & (gnl|cdd|63837 : 330.0) no description available & (gnl|cdd|38512 : 306.0) no description available & (reliability: 730.0) & (original description: Putative TBP1, Description = TATA-box-binding protein, PFAM = PF00352;PF00352)' T '27.2' 'RNA.transcription' 'niben101scf02182_1379826-1388464' '(at4g10070 : 280.0) KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein (TAIR:AT1G33680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36889 : 110.0) no description available & (reliability: 560.0) & (original description: Putative F14M2.18, Description = F14M2.18 protein, PFAM = PF00013;PF00013)' T '27.2' 'RNA.transcription' 'niben101scf02310_485959-492045' '(at5g09920 : 209.0) Non-catalytic subunit specific to DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB4); NRPB4; CONTAINS InterPro DOMAIN/s: HRDC-like (InterPro:IPR010997), RNA polymerase II, Rpb4 (InterPro:IPR005574), RNA polymerase II, Rpb4, core (InterPro:IPR006590); BEST Arabidopsis thaliana protein match is: RNA polymerase II, Rpb4, core protein (TAIR:AT4G15950.1); Has 441 Blast hits to 441 proteins in 181 species: Archae - 4; Bacteria - 0; Metazoa - 144; Fungi - 150; Plants - 95; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|37562 : 148.0) no description available & (gnl|cdd|47933 : 115.0) no description available & (reliability: 418.0) & (original description: Putative NRPB4, Description = DNA-directed RNA polymerase II subunit 4, PFAM = PF03874)' T '27.2' 'RNA.transcription' 'niben101scf02455_176441-183176' '(at1g80480 : 562.0) plastid transcriptionally active 17 (PTAC17); LOCATED IN: plastid chromosome, chloroplast stroma, chloroplast, nucleoid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495), Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal (InterPro:IPR011629); BEST Arabidopsis thaliana protein match is: Cobalamin biosynthesis CobW-like protein (TAIR:AT1G15730.1); Has 22612 Blast hits to 14499 proteins in 1972 species: Archae - 190; Bacteria - 10146; Metazoa - 2946; Fungi - 801; Plants - 655; Viruses - 16; Other Eukaryotes - 7858 (source: NCBI BLink). & (gnl|cdd|37954 : 457.0) no description available & (gnl|cdd|30869 : 308.0) no description available & (reliability: 1124.0) & (original description: Putative PTAC17, Description = Cobalamin synthesis protein P47K, PFAM = PF02492;PF07683)' T '27.2' 'RNA.transcription' 'niben101scf02508_730708-743656' '(at3g21350 : 283.0) MED6; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med6 (InterPro:IPR007018), Mediator complex, subunit Med6, metazoa/plant (InterPro:IPR016820); Has 341 Blast hits to 341 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 132; Plants - 38; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|38379 : 127.0) no description available & (gnl|cdd|68505 : 111.0) no description available & (reliability: 566.0) & (original description: Putative MED6, Description = Mediator of RNA polymerase II transcription subunit 6, PFAM = PF04934)' T '27.2' 'RNA.transcription' 'niben101scf02548_657236-665593' '(at4g19210 : 1166.0) member of RLI subfamily; RNAse l inhibitor protein 2 (RLI2); FUNCTIONS IN: transporter activity; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ABC transporter-like (InterPro:IPR003439), 4Fe-4S binding domain (InterPro:IPR001450), ATPase, AAA+ type, core (InterPro:IPR003593), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), RNase L inhibitor RLI, possible metal-binding domain (InterPro:IPR007209), ABC transporter, ABCE (InterPro:IPR013283), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: RNAse l inhibitor protein 1 (TAIR:AT3G13640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35286 : 1092.0) no description available & (gnl|cdd|31438 : 886.0) no description available & (p56344|cysa_chlvu : 80.1) Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Chlorella vulgaris (Green alga) & (reliability: 2332.0) & (original description: Putative ABCE2, Description = ABC transporter E family member 2, PFAM = PF00005;PF00005;PF04068;PF00037)' T '27.2' 'RNA.transcription' 'niben101scf02623_112190-124916' '(q8l6j1|rpo3b_tobac : 1791.0) DNA-directed RNA polymerase 3B, chloroplast precursor (EC 2.7.7.6) (T7 bacteriophage-type single subunit RNA polymerase 3B) (NictaRpoT3-tom) - Nicotiana tabacum (Common tobacco) & (at2g24120 : 1249.0) SCABRA 3 (SCA3); FUNCTIONS IN: DNA-directed RNA polymerase activity, protein binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, bacteriophage type (InterPro:IPR002092); BEST Arabidopsis thaliana protein match is: male gametophyte defective 3 (TAIR:AT1G68990.1); Has 1200 Blast hits to 1186 proteins in 332 species: Archae - 0; Bacteria - 40; Metazoa - 130; Fungi - 220; Plants - 200; Viruses - 136; Other Eukaryotes - 474 (source: NCBI BLink). & (gnl|cdd|36256 : 1143.0) no description available & (gnl|cdd|34711 : 592.0) no description available & (reliability: 2498.0) & (original description: Putative rpmA, Description = DNA-directed RNA polymerase, PFAM = PF00940;PF14700)' T '27.2' 'RNA.transcription' 'niben101scf02738_660146-679171' '(q8vwf8|rpot2_nicsy : 1923.0) DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor (EC 2.7.7.6) (T7 bacteriophage-type single subunit RNA polymerase 2) (NsRpoT-B) - Nicotiana sylvestris (Wood tobacco) & (at5g15700 : 1317.0) Nucleus encoded plastid RNA polymerase. Localized in mitochondria and chloroplast.; DNA/RNA polymerases superfamily protein; FUNCTIONS IN: RNA polymerase activity, DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: mitochondrion, chloroplast, thylakoid membrane; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, bacteriophage type (InterPro:IPR002092); BEST Arabidopsis thaliana protein match is: male gametophyte defective 3 (TAIR:AT1G68990.1). & (gnl|cdd|36256 : 1203.0) no description available & (gnl|cdd|34711 : 608.0) no description available & (reliability: 2634.0) & (original description: Putative RPOT2, Description = DNA-directed RNA polymerase 2, chloroplastic/mitochondrial, PFAM = PF00940;PF14700)' T '27.2' 'RNA.transcription' 'niben101scf02786_320359-333391' '(at1g03280 : 439.0) Transcription factor TFIIE, alpha subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription initiation factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: endomembrane system, transcription factor TFIIE complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIE, alpha subunit (InterPro:IPR002853), Transcription factor TFE/TFIIEalpha, HTH domain (InterPro:IPR017919); BEST Arabidopsis thaliana protein match is: Transcription factor TFIIE, alpha subunit (TAIR:AT4G20340.1); Has 759 Blast hits to 706 proteins in 191 species: Archae - 5; Bacteria - 10; Metazoa - 313; Fungi - 190; Plants - 108; Viruses - 11; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|37804 : 289.0) no description available & (gnl|cdd|47832 : 122.0) no description available & (reliability: 878.0) & (original description: Putative Os08g0343300, Description = Os08g0343300 protein, PFAM = PF02002)' T '27.2' 'RNA.transcription' 'niben101scf02842_18671-24093' '(at3g22320 : 299.0) Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV; homologous to budding yeast RPB5.; NRPB5; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase II, core complex, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, Rpb5, N-terminal (InterPro:IPR005571), RNA polymerase, subunit H/Rpb5 C-terminal (InterPro:IPR000783), DNA-directed RNA polymerase, RPB5 subunit (InterPro:IPR014381), RNA polymerase, subunit H/Rpb5, conserved site (InterPro:IPR020608); BEST Arabidopsis thaliana protein match is: RNA polymerase II fifth largest subunit, C (TAIR:AT5G57980.1); Has 1046 Blast hits to 1046 proteins in 368 species: Archae - 260; Bacteria - 0; Metazoa - 162; Fungi - 216; Plants - 118; Viruses - 20; Other Eukaryotes - 270 (source: NCBI BLink). & (gnl|cdd|38428 : 270.0) no description available & (gnl|cdd|67484 : 101.0) no description available & (reliability: 598.0) & (original description: Putative NRPB5A, Description = DNA-directed RNA polymerases II and IV subunit 5A, PFAM = PF01191;PF03871)' T '27.2' 'RNA.transcription' 'niben101scf02868_485829-495328' '(at4g31720 : 186.0) Arabidopsis thaliana putative TBP-associated 15 kDa subunit protein (TAFII15); TBP-associated factor II 15 (TAFII15); FUNCTIONS IN: RNA polymerase II transcription factor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID, 23-30kDa subunit (InterPro:IPR003923); Has 372 Blast hits to 372 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 132; Plants - 56; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|38633 : 138.0) no description available & (gnl|cdd|34763 : 87.5) no description available & (reliability: 372.0) & (original description: Putative TAF10, Description = Transcription initiation factor TFIID subunit 10, PFAM = PF03540)' T '27.2' 'RNA.transcription' 'niben101scf03031_494811-498428' '(at3g22590 : 501.0) Encodes PLANT HOMOLOGOUS TO PARAFIBROMIN (PHP), a homolog of human Paf1 Complex (Paf1C) subunit Parafibromin. Human Parafibromin assists in mediating output from the Wnt signaling pathway, and dysfunction of the encoding gene HRPT2 conditions specific cancer-related disease phenotypes. PHP resides in a ~670-kDa protein complex in nuclear extracts, and physically interacts with other known Paf1C-related proteins in vivo. Loss of PHP specifically conditioned accelerated phase transition from vegetative growth to flowering and resulted in misregulation of a very limited subset of genes that included the flowering repressor FLOWERING LOCUS C (FLC).; PLANT HOMOLOGOUS TO PARAFIBROMIN (PHP); CONTAINS InterPro DOMAIN/s: RNA polymerase II accessory factor, Cdc73 (InterPro:IPR007852); Has 502 Blast hits to 395 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 257; Fungi - 127; Plants - 42; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|38990 : 271.0) no description available & (gnl|cdd|86810 : 252.0) no description available & (reliability: 1002.0) & (original description: Putative CDC73, Description = Protein CDC73 homolog, PFAM = PF16050;PF05179)' T '27.2' 'RNA.transcription' 'niben101scf03208_211547-226857' '(at4g13670 : 249.0) plastid transcriptionally active 5 (PTAC5); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, metabolic process; LOCATED IN: plastid chromosome, chloroplast thylakoid membrane, chloroplast, nucleoid, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan binding-like (InterPro:IPR002477), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 835 Blast hits to 827 proteins in 285 species: Archae - 9; Bacteria - 385; Metazoa - 155; Fungi - 28; Plants - 81; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative PTAC5, Description = At4g13670, PFAM = PF01471)' T '27.2' 'RNA.transcription' 'niben101scf03393_14849-38264' '(at3g23590 : 1500.0) REF4-related 1 (RFR1); BEST Arabidopsis thaliana protein match is: reduced epidermal fluorescence 4 (TAIR:AT2G48110.1); Has 143 Blast hits to 139 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 3000.0) & (original description: Putative MED33A, Description = Mediator of RNA polymerase II transcription subunit 33A, PFAM = )' T '27.2' 'RNA.transcription' 'niben101scf03565_53525-68738' '(at3g49000 : 373.0) RNA polymerase III subunit RPC82 family protein; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase III subunit RPC82-related, helix-turn-helix (InterPro:IPR013197), RNA polymerase III Rpc82, C -terminal (InterPro:IPR008806); Has 265 Blast hits to 257 proteins in 119 species: Archae - 0; Bacteria - 2; Metazoa - 106; Fungi - 69; Plants - 57; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|37798 : 218.0) no description available & (gnl|cdd|69183 : 121.0) no description available & (reliability: 746.0) & (original description: Putative glysoja_041468, Description = DNA-directed RNA polymerase III subunit RPC3, PFAM = PF08221;PF05645)' T '27.2' 'RNA.transcription' 'niben101scf03638_60928-67862' '(at1g80480 : 421.0) plastid transcriptionally active 17 (PTAC17); LOCATED IN: plastid chromosome, chloroplast stroma, chloroplast, nucleoid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495), Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal (InterPro:IPR011629); BEST Arabidopsis thaliana protein match is: Cobalamin biosynthesis CobW-like protein (TAIR:AT1G15730.1); Has 22612 Blast hits to 14499 proteins in 1972 species: Archae - 190; Bacteria - 10146; Metazoa - 2946; Fungi - 801; Plants - 655; Viruses - 16; Other Eukaryotes - 7858 (source: NCBI BLink). & (gnl|cdd|37954 : 379.0) no description available & (gnl|cdd|30869 : 319.0) no description available & (reliability: 842.0) & (original description: Putative F7H2.7, Description = At1g15730/F7H2_7, PFAM = PF07683;PF02492)' T '27.2' 'RNA.transcription' 'niben101scf03693_478390-484586' '(at4g36650 : 538.0) Encodes a protein with similarity to the general transcription factor TFIIB. pBRP binds rDNA sequences in vitro. pBRP has been localized to the outer face of the plastid membrane with GFP fusion however, under conditions of proteosome inhibition it is found in the nucleus.; plant-specific TFIIB-related protein (PBRP); FUNCTIONS IN: RNA polymerase II transcription factor activity, rDNA binding; INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: plastid outer membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: transcription factor IIB (TAIR:AT2G41630.1); Has 1297 Blast hits to 1296 proteins in 319 species: Archae - 504; Bacteria - 1; Metazoa - 214; Fungi - 180; Plants - 140; Viruses - 3; Other Eukaryotes - 255 (source: NCBI BLink). & (gnl|cdd|36810 : 314.0) no description available & (gnl|cdd|31595 : 146.0) no description available & (q8w0w3|tf2b_orysa : 93.2) Transcription initiation factor IIB (General transcription factor TFIIB) - Oryza sativa (Rice) & (reliability: 1076.0) & (original description: Putative pBrp, Description = TFIIB-related protein, PFAM = PF00382;PF00382)' T '27.2' 'RNA.transcription' 'niben101scf03693_669433-679852' '(at5g49530 : 377.0) SIN-like family protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68376 : 286.0) no description available & (gnl|cdd|37565 : 154.0) no description available & (reliability: 754.0) & (original description: Putative PGSC0003DMG400004762, Description = DNA-directed RNA polymerase III subunit RPC5, PFAM = PF04801)' T '27.2' 'RNA.transcription' 'niben101scf03817_1220639-1226008' '(gnl|cdd|35482 : 232.0) no description available & (at5g60040 : 228.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C1 (NRPC1); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), DNA-directed RNA polymerase III largest subunit (InterPro:IPR015700), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: RNA polymerase II large subunit (TAIR:AT4G35800.1). & (gnl|cdd|86769 : 140.0) no description available & (reliability: 456.0) & (original description: Putative rpc1, Description = DNA-directed RNA polymerase subunit, PFAM = PF04998)' T '27.2' 'RNA.transcription' 'niben101scf03918_118036-121986' '(at1g54140 : 209.0) putative TATA binding protein associated factor 21kDa; TATA binding protein associated factor 21kDa subunit (TAFII21); FUNCTIONS IN: transcription initiation factor activity, DNA binding; INVOLVED IN: transcription initiation; LOCATED IN: transcription factor TFIID complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TAFII-31 (InterPro:IPR003162), Histone-fold (InterPro:IPR009072); Has 434 Blast hits to 434 proteins in 170 species: Archae - 0; Bacteria - 2; Metazoa - 206; Fungi - 130; Plants - 53; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|38544 : 158.0) no description available & (gnl|cdd|66019 : 122.0) no description available & (reliability: 418.0) & (original description: Putative TAF9, Description = Transcription initiation factor TFIID subunit 9, PFAM = PF02291)' T '27.2' 'RNA.transcription' 'niben101scf03944_207887-215936' '(at3g16980 : 197.0) One of two highly similar, non-catalytic subunits common to nuclear DNA-directed RNA polymerases II, IV and V; homologous to budding yeast RPB9. Appears to be redundant with At4g16265; NRPB9A; FUNCTIONS IN: DNA-directed RNA polymerase activity, transcription regulator activity, DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: transcription, regulation of transcription; LOCATED IN: DNA-directed RNA polymerase V complex, DNA-directed RNA polymerase II, core complex; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, TFIIS-type (InterPro:IPR001222), DNA-directed RNA polymerase, M/15kDa subunit (InterPro:IPR001529), DNA-directed RNA polymerase M, 15kDa subunit, conserved site (InterPro:IPR019761); BEST Arabidopsis thaliana protein match is: RNA polymerases M/15 Kd subunit (TAIR:AT4G16265.1); Has 955 Blast hits to 950 proteins in 294 species: Archae - 163; Bacteria - 0; Metazoa - 246; Fungi - 231; Plants - 130; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (gnl|cdd|37902 : 152.0) no description available & (reliability: 394.0) & (original description: Putative NRPB9A, Description = DNA-directed RNA polymerases II, IV and V subunit 9A, PFAM = PF02150;PF01096)' T '27.2' 'RNA.transcription' 'niben101scf03964_218661-222292' '(at1g06790 : 172.0) RNA polymerase Rpb7 N-terminal domain-containing protein; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rpb7, N-terminal (InterPro:IPR005576), RNA polymerase III, subunit Rpc25 (InterPro:IPR013238); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38507 : 130.0) no description available & (gnl|cdd|71725 : 90.4) no description available & (reliability: 344.0) & (original description: Putative MTR_8g072680, Description = DNA-directed RNA polymerase III protein, PFAM = PF08292)' T '27.2' 'RNA.transcription' 'niben101scf03964_219348-223530' '(at1g06790 : 243.0) RNA polymerase Rpb7 N-terminal domain-containing protein; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rpb7, N-terminal (InterPro:IPR005576), RNA polymerase III, subunit Rpc25 (InterPro:IPR013238); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38507 : 211.0) no description available & (gnl|cdd|31292 : 117.0) no description available & (reliability: 486.0) & (original description: Putative RPB7B, Description = DNA-directed RNA polymerase II, 19 kDa polypeptide, PFAM = PF03876;PF08292)' T '27.2' 'RNA.transcription' 'niben101scf04067_702870-712072' '(at5g43130 : 439.0) TBP-associated factor 4 (TAF4); FUNCTIONS IN: transcription initiation factor activity; INVOLVED IN: transcription initiation; LOCATED IN: transcription factor TFIID complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID component TAF4 (InterPro:IPR007900), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: TBP-associated factor 4B (TAIR:AT1G27720.1). & (gnl|cdd|86833 : 178.0) no description available & (reliability: 878.0) & (original description: Putative TAF4B, Description = Transcription initiation factor TFIID subunit 4b, PFAM = PF05236;PF12174)' T '27.2' 'RNA.transcription' 'niben101scf04187_44558-62027' '(q93y94|rpot1_nicsy : 1914.0) DNA-directed RNA polymerase 1, mitochondrial precursor (EC 2.7.7.6) (T7 bacteriophage-type single subunit RNA polymerase 1) (NsRpoT-A) - Nicotiana sylvestris (Wood tobacco) & (at1g68990 : 1253.0) MGP3 (male gametophyte-defective 3) belongs to a small family of nuclear-encoded Phage type RNA polymerases (RPOTs) involved in the transcription of mitochondrial genes in Arabidopsis thaliana. Mutation in MGP 3 significantly retarded pollen tube growth and caused defective embryo development.; male gametophyte defective 3 (MGP3); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: pollen tube growth, transcription, ovule development, embryo development ending in seed dormancy; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, bacteriophage type (InterPro:IPR002092); BEST Arabidopsis thaliana protein match is: DNA/RNA polymerases superfamily protein (TAIR:AT5G15700.1). & (gnl|cdd|36256 : 1229.0) no description available & (gnl|cdd|34711 : 605.0) no description available & (reliability: 2506.0) & (original description: Putative RPOT1, Description = DNA-directed RNA polymerase 1, mitochondrial, PFAM = PF00940;PF14700)' T '27.2' 'RNA.transcription' 'niben101scf04189_39179-55627' '(at2g19930 : 714.0) RNA-dependent RNA polymerase family protein; FUNCTIONS IN: RNA-directed RNA polymerase activity; INVOLVED IN: posttranscriptional gene silencing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: RNA-dependent RNA polymerase, eukaryotic-type (InterPro:IPR007855); BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase family protein (TAIR:AT2G19910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36206 : 303.0) no description available & (gnl|cdd|68744 : 226.0) no description available & (reliability: 1428.0) & (original description: Putative RDR5, Description = Probable RNA-dependent RNA polymerase 5, PFAM = PF05183)' T '27.2' 'RNA.transcription' 'niben101scf04404_514319-523842' '(at3g10330 : 557.0) Cyclin-like family protein; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, zinc ion binding, translation initiation factor activity; INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation, regulation of transcription; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Cyclin-like (InterPro:IPR011028), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-related (InterPro:IPR013763), Zinc finger, TFIIB-type (InterPro:IPR013137), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: transcription factor IIB (TAIR:AT2G41630.1); Has 1989 Blast hits to 1976 proteins in 358 species: Archae - 539; Bacteria - 1; Metazoa - 303; Fungi - 308; Plants - 195; Viruses - 12; Other Eukaryotes - 631 (source: NCBI BLink). & (p48513|tf2b_soybn : 546.0) Transcription initiation factor IIB (General transcription factor TFIIB) - Glycine max (Soybean) & (gnl|cdd|36810 : 418.0) no description available & (gnl|cdd|31595 : 223.0) no description available & (reliability: 1114.0) & (original description: Putative TFIIB1, Description = Transcription initiation factor IIB, PFAM = PF08271;PF00382;PF00382)' T '27.2' 'RNA.transcription' 'niben101scf04523_63857-66316' '(at4g14660 : 151.0) Non-catalytic subunit specific to DNA-directed RNA polymerase V; homologous to budding yeast RPB7; NRPE7; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), RNA polymerase Rpb7, N-terminal (InterPro:IPR005576); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb7-like, N-terminal domain (TAIR:AT3G22900.1); Has 678 Blast hits to 678 proteins in 287 species: Archae - 183; Bacteria - 0; Metazoa - 137; Fungi - 169; Plants - 112; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|38508 : 96.1) no description available & (reliability: 302.0) & (original description: Putative NRPE7, Description = Nucleic acid-binding, OB-fold, PFAM = )' T '27.2' 'RNA.transcription' 'niben101scf04740_243802-245524' '(at5g45140 : 383.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C2 (NRPC2); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT4G21710.1); Has 31946 Blast hits to 25220 proteins in 8516 species: Archae - 496; Bacteria - 14545; Metazoa - 599; Fungi - 7189; Plants - 2320; Viruses - 240; Other Eukaryotes - 6557 (source: NCBI BLink). & (gnl|cdd|35436 : 345.0) no description available & (gnl|cdd|73223 : 289.0) no description available & (p56299|rpob_chlvu : 86.7) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Chlorella vulgaris (Green alga) & (reliability: 766.0) & (original description: Putative rpc2, Description = DNA-directed RNA polymerase subunit beta, PFAM = PF04560;PF00562)' T '27.2' 'RNA.transcription' 'niben101scf04764_588221-606688' '(at1g54250 : 182.0) One of two highly similar proteins that can serve as non-catalytic subunits of Nuclear RNA polymerases II and V; homologous to budding yeast RPB8. Probably redundant with At3g59600.; NRPB8A; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase II, core complex; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), RNA polymerase, Rpb8 (InterPro:IPR005570); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb8 (TAIR:AT3G59600.1); Has 513 Blast hits to 511 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 205; Plants - 84; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|38610 : 164.0) no description available & (gnl|cdd|86462 : 160.0) no description available & (reliability: 364.0) & (original description: Putative NRPB8B, Description = DNA-directed RNA polymerases II, IV and V subunit 8B, PFAM = PF03870)' T '27.2' 'RNA.transcription' 'niben101scf04795_195185-218719' '(at3g52270 : 255.0) Transcription initiation factor IIF, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, catalytic activity, ATP binding; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIIF complex; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039), Transcription initiation factor IIF, beta subunit (InterPro:IPR003196); BEST Arabidopsis thaliana protein match is: Transcription initiation factor IIF, beta subunit (TAIR:AT1G75510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38116 : 203.0) no description available & (gnl|cdd|66000 : 93.2) no description available & (reliability: 486.0) & (original description: Putative At3g52270, Description = Transcription initiation factor IIF, beta subunit, PFAM = PF02270)' T '27.2' 'RNA.transcription' 'niben101scf04899_168817-172854' '(at1g02680 : 154.0) TBP-associated factor 13 (TAF13); FUNCTIONS IN: RNA polymerase II transcription factor activity, DNA binding; INVOLVED IN: transcription initiation, transcription from RNA polymerase II promoter; LOCATED IN: transcription factor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor IID, 18kDa subunit (InterPro:IPR003195), Histone-fold (InterPro:IPR009072); Has 554 Blast hits to 554 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 207; Fungi - 284; Plants - 44; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|39104 : 127.0) no description available & (gnl|cdd|65999 : 101.0) no description available & (reliability: 308.0) & (original description: Putative TAF13, Description = Transcription initiation factor TFIID subunit 13, PFAM = PF02269)' T '27.2' 'RNA.transcription' 'niben101scf04973_105330-107563' '(at1g61700 : 113.0) Protein of unknown function that is homologous to the At1g11475 locus that encodes a non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V. Homologous to budding yeast RPB10.; RNA polymerases N / 8 kDa subunit; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding, zinc ion binding; INVOLVED IN: transcription, DNA-dependent, transcription, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA polymerases, N/8kDa subunit (InterPro:IPR000268), RNA polymerases, subunit N, zinc binding site (InterPro:IPR020789), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: RNA polymerases N / 8 kDa subunit (TAIR:AT1G11475.1); Has 943 Blast hits to 943 proteins in 326 species: Archae - 263; Bacteria - 0; Metazoa - 146; Fungi - 184; Plants - 71; Viruses - 3; Other Eukaryotes - 276 (source: NCBI BLink). & (q39290|rpb10_brana : 110.0) DNA-directed RNA polymerase II 8.2 kDa polypeptide (EC 2.7.7.6) (RPB10) (RP10) (ABC10) - Brassica napus (Rape) & (gnl|cdd|38707 : 108.0) no description available & (gnl|cdd|31830 : 92.2) no description available & (reliability: 226.0) & (original description: Putative NRPB10, Description = DNA-directed RNA polymerases II, IV and V subunit 10, PFAM = PF01194)' T '27.2' 'RNA.transcription' 'niben101scf04987_112742-115332' '(at4g14660 : 120.0) Non-catalytic subunit specific to DNA-directed RNA polymerase V; homologous to budding yeast RPB7; NRPE7; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), RNA polymerase Rpb7, N-terminal (InterPro:IPR005576); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb7-like, N-terminal domain (TAIR:AT3G22900.1); Has 678 Blast hits to 678 proteins in 287 species: Archae - 183; Bacteria - 0; Metazoa - 137; Fungi - 169; Plants - 112; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|38508 : 110.0) no description available & (reliability: 240.0) & (original description: Putative TCM_020785, Description = DNA-directed RNA polymerase II subunit RPB7, putative isoform 1, PFAM = )' T '27.2' 'RNA.transcription' 'niben101scf05278_93856-100081' '(at3g46780 : 449.0) plastid transcriptionally active 16 (PTAC16); FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G18890.1); Has 1243 Blast hits to 1093 proteins in 359 species: Archae - 5; Bacteria - 555; Metazoa - 73; Fungi - 75; Plants - 168; Viruses - 22; Other Eukaryotes - 345 (source: NCBI BLink). & (gnl|cdd|36417 : 144.0) no description available & (reliability: 898.0) & (original description: Putative PTAC16, Description = Protein plastid transcriptionally active 16, chloroplastic, PFAM = PF13460)' T '27.2' 'RNA.transcription' 'niben101scf05351_39658-51659' '(p46279|rpb7_soybn : 335.0) DNA-directed RNA polymerase II 19 kDa polypeptide (EC 2.7.7.6) (RNA polymerase II subunit 5) - Glycine max (Soybean) & (at5g59180 : 327.0) Non-catalytic subunit specific to DNA-directed RNA polymerase II; the ortholog of budding yeast RPB7; NRPB7; FUNCTIONS IN: DNA-directed RNA polymerase activity, RNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase II, core complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), RNA polymerase Rpb7, N-terminal (InterPro:IPR005576); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb7-like, N-terminal domain (TAIR:AT4G14660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38508 : 235.0) no description available & (gnl|cdd|31292 : 133.0) no description available & (reliability: 654.0) & (original description: Putative rft1, Description = DNA-directed RNA polymerase II subunit RPB7, PFAM = PF03876;PF00575)' T '27.2' 'RNA.transcription' 'niben101scf05535_231963-250371' '(gnl|cdd|38428 : 176.0) no description available & (at3g57080 : 171.0) Non-catalytic subunit unique to Nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB5.; NRPE5; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, Rpb5, N-terminal (InterPro:IPR005571), RNA polymerase, subunit H/Rpb5 C-terminal (InterPro:IPR000783), DNA-directed RNA polymerase, RPB5 subunit (InterPro:IPR014381); BEST Arabidopsis thaliana protein match is: RNA polymerase II fifth largest subunit, D (TAIR:AT2G41340.1); Has 910 Blast hits to 910 proteins in 323 species: Archae - 199; Bacteria - 0; Metazoa - 157; Fungi - 216; Plants - 117; Viruses - 5; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|67484 : 92.2) no description available & (reliability: 342.0) & (original description: Putative NRPE5A, Description = DNA-directed RNA polymerase V subunit 5A, PFAM = PF01191;PF03871)' T '27.2' 'RNA.transcription' 'niben101scf05576_32509-35306' '(at5g10070 : 311.0) RNase L inhibitor protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF367 (InterPro:IPR007177), RNase L inhibitor RLI, possible metal-binding domain (InterPro:IPR007209); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38364 : 286.0) no description available & (gnl|cdd|32225 : 219.0) no description available & (reliability: 622.0) & (original description: Putative TSR3, Description = Ribosome biogenesis protein TSR3, PFAM = PF04068;PF04034)' T '27.2' 'RNA.transcription' 'niben101scf05610_330202-335593' '(at4g36650 : 541.0) Encodes a protein with similarity to the general transcription factor TFIIB. pBRP binds rDNA sequences in vitro. pBRP has been localized to the outer face of the plastid membrane with GFP fusion however, under conditions of proteosome inhibition it is found in the nucleus.; plant-specific TFIIB-related protein (PBRP); FUNCTIONS IN: RNA polymerase II transcription factor activity, rDNA binding; INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: plastid outer membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: transcription factor IIB (TAIR:AT2G41630.1); Has 1297 Blast hits to 1296 proteins in 319 species: Archae - 504; Bacteria - 1; Metazoa - 214; Fungi - 180; Plants - 140; Viruses - 3; Other Eukaryotes - 255 (source: NCBI BLink). & (gnl|cdd|36810 : 307.0) no description available & (gnl|cdd|31595 : 140.0) no description available & (q8w0w3|tf2b_orysa : 93.2) Transcription initiation factor IIB (General transcription factor TFIIB) - Oryza sativa (Rice) & (reliability: 1082.0) & (original description: Putative pBrp, Description = TFIIB-related protein, PFAM = PF00382;PF00382)' T '27.2' 'RNA.transcription' 'niben101scf06080_301055-329136' '(at1g29940 : 1674.0) Encodes a subunit of RNA polymerase 1 (aka RNA polymerase A).; nuclear RNA polymerase A2 (NRPA2); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase I, Rpa2 specific (InterPro:IPR009674), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C2 (TAIR:AT5G45140.1); Has 19116 Blast hits to 18561 proteins in 6776 species: Archae - 498; Bacteria - 7658; Metazoa - 537; Fungi - 3600; Plants - 1857; Viruses - 241; Other Eukaryotes - 4725 (source: NCBI BLink). & (gnl|cdd|35437 : 1421.0) no description available & (gnl|cdd|30434 : 608.0) no description available & (q85x54|rpob_pinko : 110.0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Pinus koraiensis (Korean pine) & (reliability: 3348.0) & (original description: Putative NRPA2, Description = DNA-directed RNA polymerase I subunit 2, PFAM = PF04565;PF04563;PF00562;PF04561;PF06883;PF04560)' T '27.2' 'RNA.transcription' 'niben101scf06156_273708-287059' '(at3g22320 : 230.0) Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV; homologous to budding yeast RPB5.; NRPB5; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase II, core complex, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, Rpb5, N-terminal (InterPro:IPR005571), RNA polymerase, subunit H/Rpb5 C-terminal (InterPro:IPR000783), DNA-directed RNA polymerase, RPB5 subunit (InterPro:IPR014381), RNA polymerase, subunit H/Rpb5, conserved site (InterPro:IPR020608); BEST Arabidopsis thaliana protein match is: RNA polymerase II fifth largest subunit, C (TAIR:AT5G57980.1); Has 1046 Blast hits to 1046 proteins in 368 species: Archae - 260; Bacteria - 0; Metazoa - 162; Fungi - 216; Plants - 118; Viruses - 20; Other Eukaryotes - 270 (source: NCBI BLink). & (gnl|cdd|38428 : 209.0) no description available & (gnl|cdd|32195 : 96.5) no description available & (reliability: 460.0) & (original description: Putative POLR2E, Description = DNA-directed RNA polymerases I, II, and III subunit RPABC1, PFAM = PF03871;PF01191)' T '27.2' 'RNA.transcription' 'niben101scf06162_42912-48242' '(at1g29940 : 282.0) Encodes a subunit of RNA polymerase 1 (aka RNA polymerase A).; nuclear RNA polymerase A2 (NRPA2); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase I, Rpa2 specific (InterPro:IPR009674), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C2 (TAIR:AT5G45140.1); Has 19116 Blast hits to 18561 proteins in 6776 species: Archae - 498; Bacteria - 7658; Metazoa - 537; Fungi - 3600; Plants - 1857; Viruses - 241; Other Eukaryotes - 4725 (source: NCBI BLink). & (gnl|cdd|35437 : 212.0) no description available & (reliability: 564.0) & (original description: Putative RPA2, Description = DNA-directed RNA polymerase subunit beta, PFAM = PF04561)' T '27.2' 'RNA.transcription' 'niben101scf06517_81047-89250' '(at4g24440 : 179.0) transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S); FUNCTIONS IN: RNA polymerase II transcription factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIIA complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor IIA, gamma subunit (InterPro:IPR003194), Transcription factor IIA, beta-barrel (InterPro:IPR009088), Transcription initiation factor IIA, gamma subunit, N-terminal (InterPro:IPR015872), Transcription initiation factor IIA, gamma subunit, C-terminal (InterPro:IPR015871), Transcription factor IIA, helical (InterPro:IPR009083); Has 553 Blast hits to 553 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 188; Fungi - 162; Plants - 188; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (q94hl5|t2ag_orysa : 169.0) Transcription initiation factor IIA gamma chain (TFIIA-gamma) - Oryza sativa (Rice) & (gnl|cdd|38673 : 151.0) no description available & (gnl|cdd|34724 : 107.0) no description available & (reliability: 358.0) & (original description: Putative toa2, Description = Transcription initiation factor IIA subunit 2, PFAM = PF02751;PF02268)' T '27.2' 'RNA.transcription' 'niben101scf06686_138571-145236' '(at1g75510 : 309.0) Transcription initiation factor IIF, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, general RNA polymerase II transcription factor activity, catalytic activity, ATP binding, ATP-dependent helicase activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter, transcription from RNA polymerase II promoter; LOCATED IN: mitochondrion, transcription factor TFIIF complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039), Transcription initiation factor IIF, beta subunit (InterPro:IPR003196), Transcription initiation factor IIF, beta subunit, subgroup (InterPro:IPR016640); BEST Arabidopsis thaliana protein match is: Transcription initiation factor IIF, beta subunit (TAIR:AT3G52270.1); Has 346 Blast hits to 346 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 128; Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|38116 : 226.0) no description available & (gnl|cdd|34693 : 116.0) no description available & (reliability: 618.0) & (original description: Putative BnaC02g24370D, Description = BnaC02g24370D protein, PFAM = PF02270)' T '27.2' 'RNA.transcription' 'niben101scf06976_293711-296535' '(at1g80780 : 455.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT2G32070.1). & (gnl|cdd|35525 : 381.0) no description available & (gnl|cdd|86737 : 295.0) no description available & (reliability: 832.0) & (original description: Putative caf1, Description = CCR4-NOT transcription complex subunit 7, PFAM = PF04857;PF04857)' T '27.2' 'RNA.transcription' 'niben101scf07203_431529-443818' '(at3g10330 : 462.0) Cyclin-like family protein; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, zinc ion binding, translation initiation factor activity; INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation, regulation of transcription; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Cyclin-like (InterPro:IPR011028), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-related (InterPro:IPR013763), Zinc finger, TFIIB-type (InterPro:IPR013137), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: transcription factor IIB (TAIR:AT2G41630.1); Has 1989 Blast hits to 1976 proteins in 358 species: Archae - 539; Bacteria - 1; Metazoa - 303; Fungi - 308; Plants - 195; Viruses - 12; Other Eukaryotes - 631 (source: NCBI BLink). & (p48513|tf2b_soybn : 457.0) Transcription initiation factor IIB (General transcription factor TFIIB) - Glycine max (Soybean) & (gnl|cdd|36810 : 370.0) no description available & (gnl|cdd|31595 : 205.0) no description available & (reliability: 924.0) & (original description: Putative gtf2b, Description = Putative uncharacterized protein gtf2b, PFAM = PF08271;PF00382;PF00382)' T '27.2' 'RNA.transcription' 'niben101scf07720_21459-32481' '(at1g61700 : 129.0) Protein of unknown function that is homologous to the At1g11475 locus that encodes a non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V. Homologous to budding yeast RPB10.; RNA polymerases N / 8 kDa subunit; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding, zinc ion binding; INVOLVED IN: transcription, DNA-dependent, transcription, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA polymerases, N/8kDa subunit (InterPro:IPR000268), RNA polymerases, subunit N, zinc binding site (InterPro:IPR020789), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: RNA polymerases N / 8 kDa subunit (TAIR:AT1G11475.1); Has 943 Blast hits to 943 proteins in 326 species: Archae - 263; Bacteria - 0; Metazoa - 146; Fungi - 184; Plants - 71; Viruses - 3; Other Eukaryotes - 276 (source: NCBI BLink). & (q39290|rpb10_brana : 129.0) DNA-directed RNA polymerase II 8.2 kDa polypeptide (EC 2.7.7.6) (RPB10) (RP10) (ABC10) - Brassica napus (Rape) & (gnl|cdd|38707 : 123.0) no description available & (gnl|cdd|31830 : 97.6) no description available & (reliability: 258.0) & (original description: Putative NRPB10, Description = DNA-directed RNA polymerases II, IV and V subunit 10, PFAM = PF01194)' T '27.2' 'RNA.transcription' 'niben101scf07727_115809-130139' '(at3g52090 : 192.0) Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB11 and the E. oli RNA polymerase alpha subunit.; NRPB11; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex, DNA-directed RNA polymerase II, holoenzyme, DNA-directed RNA polymerase II, core complex, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site (InterPro:IPR008193), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025). & (gnl|cdd|39593 : 158.0) no description available & (reliability: 384.0) & (original description: Putative NRPB11, Description = DNA-directed RNA polymerases II, IV and V subunit 11, PFAM = PF13656)' T '27.2' 'RNA.transcription' 'niben101scf07798_145635-155146' '(at1g17440 : 186.0) Encodes one of two Arabidopsis proteins with similarity to the TBP-associated factor TAF12. The gene product is an EIN3-interacting TFIID transcription factor required for proper ethylene response, including ERF1 induction. Loss of function mutants show enhanced response to ethylene. Located in nucleus and expressed throughout the plant. Required for ERF1 expression.; ENHANCED ETHYLENE RESPONSE 4 (EER4); FUNCTIONS IN: DNA binding, transcription initiation factor activity; INVOLVED IN: regulation of ethylene mediated signaling pathway, jasmonic acid mediated signaling pathway, transcription initiation; LOCATED IN: nucleus, transcription factor TFIID complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID (InterPro:IPR003228), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: TBP-associated factor 12 (TAIR:AT3G10070.1); Has 83508 Blast hits to 36935 proteins in 1541 species: Archae - 40; Bacteria - 5554; Metazoa - 31214; Fungi - 9645; Plants - 6795; Viruses - 322; Other Eukaryotes - 29938 (source: NCBI BLink). & (gnl|cdd|86457 : 113.0) no description available & (gnl|cdd|36357 : 93.6) no description available & (reliability: 372.0) & (original description: Putative taf12, Description = Transcription initiation factor TFIID subunit 12, PFAM = PF03847)' T '27.2' 'RNA.transcription' 'niben101scf08193_129920-137399' '(at4g19210 : 1162.0) member of RLI subfamily; RNAse l inhibitor protein 2 (RLI2); FUNCTIONS IN: transporter activity; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ABC transporter-like (InterPro:IPR003439), 4Fe-4S binding domain (InterPro:IPR001450), ATPase, AAA+ type, core (InterPro:IPR003593), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), RNase L inhibitor RLI, possible metal-binding domain (InterPro:IPR007209), ABC transporter, ABCE (InterPro:IPR013283), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: RNAse l inhibitor protein 1 (TAIR:AT3G13640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35286 : 1093.0) no description available & (gnl|cdd|31438 : 888.0) no description available & (reliability: 2324.0) & (original description: Putative ABCE1, Description = ABC transporter E family member 1, PFAM = PF04068;PF00005;PF00005;PF00037)' T '27.2' 'RNA.transcription' 'niben101scf08446_160242-172202' '(at4g21710 : 2259.0) Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit.; NRPB2; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C2 (TAIR:AT5G45140.1); Has 37546 Blast hits to 27868 proteins in 9192 species: Archae - 496; Bacteria - 17572; Metazoa - 623; Fungi - 7193; Plants - 3397; Viruses - 232; Other Eukaryotes - 8033 (source: NCBI BLink). & (gnl|cdd|35435 : 1848.0) no description available & (gnl|cdd|82681 : 1134.0) no description available & (q9mus5|rpob_mesvi : 176.0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Mesostigma viride & (reliability: 4518.0) & (original description: Putative NRPB2, Description = DNA-directed RNA polymerase II subunit 2, PFAM = PF04566;PF04560;PF04567;PF04563;PF00562;PF04565;PF04561)' T '27.2' 'RNA.transcription' 'niben101scf08533_209137-217430' '(at3g52270 : 164.0) Transcription initiation factor IIF, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, catalytic activity, ATP binding; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIIF complex; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039), Transcription initiation factor IIF, beta subunit (InterPro:IPR003196); BEST Arabidopsis thaliana protein match is: Transcription initiation factor IIF, beta subunit (TAIR:AT1G75510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38116 : 135.0) no description available & (reliability: 326.0) & (original description: Putative umc1196a, Description = General transcription factor IIF subunit 2, PFAM = PF02270)' T '27.2' 'RNA.transcription' 'niben101scf09310_335071-344308' '(p26357|tbp_soltu : 394.0) TATA-box-binding protein (TATA-box factor) (TATA-binding factor) (TATA sequence-binding protein) (TBP) (Transcription initiation factor TFIID TBP subunit) - Solanum tuberosum (Potato) & (at1g55520 : 373.0) TATA-box binding protein. Required for basal transcription. Acts facilitating the recruitment of TFIID to the promoter, which together with the RNA polymerase form the preinitiation complex.; TATA binding protein 2 (TBP2); CONTAINS InterPro DOMAIN/s: TATA-box binding (InterPro:IPR000814), Beta2-adaptin/TATA-box binding, C-terminal (InterPro:IPR012295), Transcription factor TFIID, C-terminal/DNA glycosylase, N-terminal (InterPro:IPR012294); BEST Arabidopsis thaliana protein match is: TATA binding protein 1 (TAIR:AT3G13445.1); Has 2123 Blast hits to 1580 proteins in 405 species: Archae - 736; Bacteria - 0; Metazoa - 578; Fungi - 191; Plants - 155; Viruses - 0; Other Eukaryotes - 463 (source: NCBI BLink). & (gnl|cdd|63837 : 331.0) no description available & (gnl|cdd|38512 : 310.0) no description available & (reliability: 746.0) & (original description: Putative TBP1, Description = TATA-box-binding protein, PFAM = PF00352;PF00352)' T '27.2' 'RNA.transcription' 'niben101scf09315_170965-173789' '(at2g32070 : 452.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT1G80780.2); Has 941 Blast hits to 931 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 285; Fungi - 149; Plants - 385; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|35525 : 383.0) no description available & (gnl|cdd|86737 : 295.0) no description available & (reliability: 826.0) & (original description: Putative cnot8, Description = CCR4-NOT transcription complex subunit 7, PFAM = PF04857;PF04857)' T '27.2' 'RNA.transcription' 'niben101scf09459_40464-47749' '(at4g13670 : 120.0) plastid transcriptionally active 5 (PTAC5); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, metabolic process; LOCATED IN: plastid chromosome, chloroplast thylakoid membrane, chloroplast, nucleoid, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan binding-like (InterPro:IPR002477), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 835 Blast hits to 827 proteins in 285 species: Archae - 9; Bacteria - 385; Metazoa - 155; Fungi - 28; Plants - 81; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative PTAC5, Description = At4g13670, PFAM = PF01471)' T '27.2' 'RNA.transcription' 'niben101scf09989_204870-212255' '(at4g20280 : 179.0) Encodes TAF11, a putative TBP-associated factor (TBP: TATA binding protein).; TBP-associated factor 11 (TAF11); FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription initiation factor activity, DNA binding; INVOLVED IN: transcription initiation from RNA polymerase II promoter, transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TAFII28-like protein (InterPro:IPR006809), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: TBP-associated factor 11B (TAIR:AT1G20000.1); Has 444 Blast hits to 437 proteins in 151 species: Archae - 0; Bacteria - 0; Metazoa - 211; Fungi - 119; Plants - 66; Viruses - 2; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|38429 : 133.0) no description available & (gnl|cdd|68297 : 121.0) no description available & (reliability: 358.0) & (original description: Putative TAF11B, Description = Transcription initiation factor TFIID subunit 11b, PFAM = PF04719)' T '27.2' 'RNA.transcription' 'niben101scf10343_130420-155789' '(p46279|rpb7_soybn : 267.0) DNA-directed RNA polymerase II 19 kDa polypeptide (EC 2.7.7.6) (RNA polymerase II subunit 5) - Glycine max (Soybean) & (at5g59180 : 261.0) Non-catalytic subunit specific to DNA-directed RNA polymerase II; the ortholog of budding yeast RPB7; NRPB7; FUNCTIONS IN: DNA-directed RNA polymerase activity, RNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase II, core complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), RNA polymerase Rpb7, N-terminal (InterPro:IPR005576); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb7-like, N-terminal domain (TAIR:AT4G14660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38508 : 188.0) no description available & (gnl|cdd|73169 : 120.0) no description available & (reliability: 522.0) & (original description: Putative RPB7, Description = DNA-directed RNA polymerase II subunit RPB7, PFAM = PF00575;PF03876)' T '27.2' 'RNA.transcription' 'niben101scf10713_29069-38507' '(at4g20330 : 309.0) Transcription initiation factor TFIIE, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIIE complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIIE, beta subunit (InterPro:IPR016656), Transcription factor TFIIE beta subunit, DNA-binding domain (InterPro:IPR003166); BEST Arabidopsis thaliana protein match is: Transcription initiation factor TFIIE, beta subunit (TAIR:AT4G21010.1); Has 316 Blast hits to 316 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 101; Plants - 70; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|38305 : 208.0) no description available & (reliability: 618.0) & (original description: Putative Sb06g028040, Description = Transcription initiation factor IIE subunit beta, PFAM = PF02186)' T '27.2' 'RNA.transcription' 'niben101scf11037_231541-251084' '(at3g23590 : 1323.0) REF4-related 1 (RFR1); BEST Arabidopsis thaliana protein match is: reduced epidermal fluorescence 4 (TAIR:AT2G48110.1); Has 143 Blast hits to 139 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 2646.0) & (original description: Putative MED33A, Description = Mediator of RNA polymerase II transcription subunit 33A, PFAM = )' T '27.2' 'RNA.transcription' 'niben101scf11909_12234-15055' '(at2g32070 : 446.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT1G80780.2); Has 941 Blast hits to 931 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 285; Fungi - 149; Plants - 385; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|35525 : 377.0) no description available & (gnl|cdd|86737 : 289.0) no description available & (reliability: 824.0) & (original description: Putative caf1, Description = CCR4-NOT transcription complex subunit 7, PFAM = PF04857;PF04857)' T '27.2' 'RNA.transcription' 'niben101scf12011_100557-106146' '(at5g63670 : 186.0) SPT4 homolog 2 (SPT42); EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation Spt4-like (InterPro:IPR016046); BEST Arabidopsis thaliana protein match is: Transcription initiation Spt4-like protein (TAIR:AT5G08565.1). & (gnl|cdd|69606 : 148.0) no description available & (gnl|cdd|38700 : 128.0) no description available & (reliability: 372.0) & (original description: Putative At5g63670, Description = Transcription elongation factor SPT4 homolog 2, PFAM = PF06093)' T '27.2' 'RNA.transcription' 'niben101scf12609_251090-257617' '(at3g49500 : 1583.0) Encodes RNA-dependent RNA polymerase. Involved in trans-acting siRNA and other siRNA biogenesis. Required for post-transcriptional gene silencing and natural virus resistance.; RNA-dependent RNA polymerase 6 (RDR6); CONTAINS InterPro DOMAIN/s: RNA-dependent RNA polymerase, eukaryotic-type (InterPro:IPR007855); BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase 1 (TAIR:AT1G14790.1); Has 633 Blast hits to 609 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 284; Plants - 204; Viruses - 2; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36206 : 859.0) no description available & (gnl|cdd|68744 : 450.0) no description available & (reliability: 3166.0) & (original description: Putative RDR6, Description = RNA-dependent RNA polymerase 6, PFAM = PF05183)' T '27.2' 'RNA.transcription' 'niben101scf12714_55965-64501' '(at4g11130 : 1302.0) Encodes RNA-dependent RNA polymerase that is required for endogenous siRNA (but not miRNA) formation. Nomenclature according to Xie, et al. (2004).; RNA-dependent RNA polymerase 2 (RDR2); CONTAINS InterPro DOMAIN/s: RNA-dependent RNA polymerase, eukaryotic-type (InterPro:IPR007855); BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase 1 (TAIR:AT1G14790.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36206 : 813.0) no description available & (gnl|cdd|68744 : 437.0) no description available & (reliability: 2604.0) & (original description: Putative RDR2, Description = RNA-dependent RNA polymerase 2, PFAM = PF05183)' T '27.2' 'RNA.transcription' 'niben101scf14012_72495-75745' '(p38550|rpoc2_tobac : 865.0) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79225 : 827.0) no description available & (atcg00170 : 661.0) RNA polymerase beta' subunit-2; RPOC2; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: RNA elongation; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), DNA-directed RNA polymerase, subunit beta'' (InterPro:IPR012756), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase A1 (TAIR:AT3G57660.1). & (reliability: 1322.0) & (original description: Putative rpoC, Description = DNA-directed RNA polymerase subunit beta'', PFAM = PF04998)' T '27.2' 'RNA.transcription' 'niben101scf14273_98502-108394' '(at4g35800 : 2746.0) Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit.; RNA polymerase II large subunit (NRPB1); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription, transcription from RNA polymerase II promoter; LOCATED IN: nucleus, chloroplast, DNA-directed RNA polymerase II, core complex, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase II, heptapeptide repeat, eukaryotic (InterPro:IPR000684), RNA polymerase Rpb1, domain 7 (InterPro:IPR007073), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 6 (InterPro:IPR007075); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 (TAIR:AT5G60040.1); Has 181834 Blast hits to 82224 proteins in 9254 species: Archae - 731; Bacteria - 33255; Metazoa - 56600; Fungi - 34284; Plants - 19037; Viruses - 3576; Other Eukaryotes - 34351 (source: NCBI BLink). & (gnl|cdd|35481 : 2326.0) no description available & (gnl|cdd|82682 : 949.0) no description available & (q9tl05|rpoc1_nepol : 143.0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) - Nephroselmis olivacea & (reliability: 5492.0) & (original description: Putative NRPB1, Description = DNA-directed RNA polymerase II subunit 1, PFAM = PF04990;PF04983;PF04992;PF04998;PF04997;PF00623;PF05000;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001;PF05001)' T '27.2' 'RNA.transcription' 'niben101scf17422_92021-101450' '(at2g15430 : 503.0) Non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB3 and the E. coli RNA polymerase alpha subunit. A closely related paralog, encoded by At2g15400, can substitute for At2g15430 in the context of Pol V.; NRPB3; FUNCTIONS IN: DNA-directed RNA polymerase activity, protein dimerization activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: in 6 components; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, insert domain (InterPro:IPR011262), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RpoA/D/Rpb3-type (InterPro:IPR011263), DNA-directed RNA polymerase, 30-40kDa subunit, conserved site (InterPro:IPR001514), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT2G15400.1); Has 1362 Blast hits to 1362 proteins in 353 species: Archae - 243; Bacteria - 1; Metazoa - 278; Fungi - 347; Plants - 109; Viruses - 0; Other Eukaryotes - 384 (source: NCBI BLink). & (gnl|cdd|36735 : 358.0) no description available & (gnl|cdd|47937 : 200.0) no description available & (reliability: 1006.0) & (original description: Putative NRPB3, Description = DNA-directed RNA polymerases II, IV and V subunit 3, PFAM = PF01000;PF01193)' T '27.2' 'RNA.transcription' 'niben101scf17688_104447-123805' '(at1g63020 : 1297.0) Encodes one of two alternative largest subunits of a putative plant-specific RNA polymerase IV (aka RNA polymerase D). Required for posttranscriptional gene silencing.; nuclear RNA polymerase D1A (NRPD1A); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: in 7 processes; LOCATED IN: nucleus, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083), Protein of unknown function DUF3223 (InterPro:IPR021602), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D1B (TAIR:AT2G40030.1). & (gnl|cdd|35481 : 683.0) no description available & (gnl|cdd|82682 : 240.0) no description available & (reliability: 2594.0) & (original description: Putative NRPD1, Description = DNA-directed RNA polymerase IV subunit 1, PFAM = PF04997;PF00623;PF11523;PF04983;PF05000)' T '27.2' 'RNA.transcription' 'niben101scf19480_1-3024' '(at2g47990 : 598.0) Encodes a transducin family nucleolar protein with six WD40 repeats that is most likely involved in 18S rRNA biogenesis. The slow progression of the gametophytic division cycles in swa1 suggested that the SWA1 protein is required for the normal progression of mitotic division cycles through the regulation of cell metabolism. Ubiquitously expressed throughout the plant.; SLOW WALKER1 (SWA1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), U3 small nucleolar RNA-associated protein 15, C-terminal (InterPro:IPR018983), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 33528 Blast hits to 20320 proteins in 654 species: Archae - 34; Bacteria - 4945; Metazoa - 12077; Fungi - 7782; Plants - 4404; Viruses - 6; Other Eukaryotes - 4280 (source: NCBI BLink). & (gnl|cdd|35531 : 514.0) no description available & (gnl|cdd|29257 : 150.0) no description available & (reliability: 1196.0) & (original description: Putative SWA1, Description = Protein SLOW WALKER 1, PFAM = PF09384;PF00400;PF00400;PF00400)' T '27.2' 'RNA.transcription' 'niben101scf23770_41839-55313' '(at3g57080 : 189.0) Non-catalytic subunit unique to Nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB5.; NRPE5; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, Rpb5, N-terminal (InterPro:IPR005571), RNA polymerase, subunit H/Rpb5 C-terminal (InterPro:IPR000783), DNA-directed RNA polymerase, RPB5 subunit (InterPro:IPR014381); BEST Arabidopsis thaliana protein match is: RNA polymerase II fifth largest subunit, D (TAIR:AT2G41340.1); Has 910 Blast hits to 910 proteins in 323 species: Archae - 199; Bacteria - 0; Metazoa - 157; Fungi - 216; Plants - 117; Viruses - 5; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|38428 : 165.0) no description available & (gnl|cdd|67484 : 93.0) no description available & (reliability: 378.0) & (original description: Putative RPB5B, Description = DNA-directed RNA polymerases I, II, and III subunit RPABC1, PFAM = PF01191;PF03871)' T '27.2' 'RNA.transcription' 'niben101scf31053_2273-11087' '(gnl|cdd|35483 : 190.0) no description available & (at3g57660 : 170.0) Encodes a subunit of RNA polymerase I (aka RNA polymerase A).; nuclear RNA polymerase A1 (NRPA1); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), DNA-directed RNA pol I, largest subunit (InterPro:IPR015699), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 (TAIR:AT5G60040.1); Has 39638 Blast hits to 28014 proteins in 7318 species: Archae - 983; Bacteria - 11101; Metazoa - 5787; Fungi - 2930; Plants - 6395; Viruses - 781; Other Eukaryotes - 11661 (source: NCBI BLink). & (gnl|cdd|82682 : 101.0) no description available & (reliability: 340.0) & (original description: Putative RPA1, Description = DNA-directed RNA polymerase subunit, PFAM = PF04997)' T '27.2.1' 'RNA.transcription.RNA Polymerases' '' '' '27.3' 'RNA.regulation of transcription' 'nbv0.3scaffold11539_35768-44566' '(at1g21600 : 392.0) Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression.; plastid transcriptionally active 6 (PTAC6); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: positive regulation of transcription, DNA-dependent, transcription from plastid promoter; LOCATED IN: plastid chromosome, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 784.0) & (original description: Putative PTAC6, Description = AT1G21600 protein, PFAM = )' T '27.3' 'RNA.regulation of transcription' 'nbv0.3scaffold23225_3371-8042' '(at5g17560 : 129.0) BolA-like family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BolA-like protein (InterPro:IPR002634); BEST Arabidopsis thaliana protein match is: BolA-like family protein (TAIR:AT1G55805.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative BOLA4, Description = BolA-like family protein, PFAM = PF01722)' T '27.3' 'RNA.regulation of transcription' 'nbv0.3scaffold46378_6392-10449' '(at1g25280 : 593.0) Member of TLP family; tubby like protein 10 (TLP10); FUNCTIONS IN: phosphoric diester hydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 5 (TAIR:AT1G43640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37713 : 444.0) no description available & (gnl|cdd|85281 : 342.0) no description available & (reliability: 1186.0) & (original description: Putative TULP14, Description = Tubby-like F-box protein 14, PFAM = PF01167;PF00646)' T '27.3' 'RNA.regulation of transcription' 'nbv0.3scaffold56006_1043-11556' '(at5g62090 : 381.0) SEUSS-like 2 (SLK2); BEST Arabidopsis thaliana protein match is: SEUSS-like 1 (TAIR:AT4G25520.1); Has 38958 Blast hits to 16422 proteins in 905 species: Archae - 6; Bacteria - 1880; Metazoa - 14538; Fungi - 4050; Plants - 2632; Viruses - 363; Other Eukaryotes - 15489 (source: NCBI BLink). & (reliability: 700.0) & (original description: Putative SLK3, Description = Probable transcriptional regulator SLK3, PFAM = PF01803)' T '27.3' 'RNA.regulation of transcription' 'nbv0.3scaffold56223_3821-11918' '(at1g79730 : 410.0) Encodes a PAF1 homolog that is involved in the control of flowering time by elevating FLC expression to a level that creates the vernalization-responsive, winter-annual habit. Yeast PAF1 is a component of a five-member complex that associates with RNA pol II and is thought to regulate gene expression by recruiting SET1 (a histone 3 Lys 4 [H3-K4] methyl transferase) to the initially transcribed [5'] regions of target chromatin. Mutants display reduced H3-K4 methylation in both FLC and FLM chromatin.; EARLY FLOWERING 7 (ELF7); CONTAINS InterPro DOMAIN/s: RNA polymerase II-associated, Paf1 (InterPro:IPR007133); Has 76068 Blast hits to 37830 proteins in 1710 species: Archae - 109; Bacteria - 10838; Metazoa - 29407; Fungi - 10155; Plants - 13778; Viruses - 2155; Other Eukaryotes - 9626 (source: NCBI BLink). & (gnl|cdd|37689 : 149.0) no description available & (gnl|cdd|67594 : 115.0) no description available & (reliability: 820.0) & (original description: Putative VIP2, Description = Protein PAF1 homolog, PFAM = PF03985)' T '27.3' 'RNA.regulation of transcription' 'nbv0.5scaffold138_841798-849153' '(at1g79730 : 458.0) Encodes a PAF1 homolog that is involved in the control of flowering time by elevating FLC expression to a level that creates the vernalization-responsive, winter-annual habit. Yeast PAF1 is a component of a five-member complex that associates with RNA pol II and is thought to regulate gene expression by recruiting SET1 (a histone 3 Lys 4 [H3-K4] methyl transferase) to the initially transcribed [5'] regions of target chromatin. Mutants display reduced H3-K4 methylation in both FLC and FLM chromatin.; EARLY FLOWERING 7 (ELF7); CONTAINS InterPro DOMAIN/s: RNA polymerase II-associated, Paf1 (InterPro:IPR007133); Has 76068 Blast hits to 37830 proteins in 1710 species: Archae - 109; Bacteria - 10838; Metazoa - 29407; Fungi - 10155; Plants - 13778; Viruses - 2155; Other Eukaryotes - 9626 (source: NCBI BLink). & (gnl|cdd|37689 : 150.0) no description available & (gnl|cdd|67594 : 117.0) no description available & (reliability: 916.0) & (original description: Putative VIP2, Description = Protein PAF1 homolog, PFAM = PF03985)' T '27.3' 'RNA.regulation of transcription' 'nbv0.5scaffold4093_74794-79570' '(at5g17560 : 129.0) BolA-like family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BolA-like protein (InterPro:IPR002634); BEST Arabidopsis thaliana protein match is: BolA-like family protein (TAIR:AT1G55805.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative BOLA4, Description = BolA-like family protein, PFAM = PF01722)' T '27.3' 'RNA.regulation of transcription' 'nbv0.5scaffold5891_38603-56538' '(at3g04740 : 1592.0) encodes a protein with similarities to subunits of the Mediator complex, required for RNA polymerase II recruitment at target promoters in response to specific activators. Lines carrying loss of function mutations in the gene have reduced cell numbers in aerial organs. On the other hand, lines overexpressing the gene have increased number of small cells in clusters, suggesting cell division is more unsynchronized in the overexpressors.; STRUWWELPETER (SWP); FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: positive regulation of transcription, positive regulation of cell proliferation; LOCATED IN: mediator complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med14 (InterPro:IPR013947); Has 940 Blast hits to 375 proteins in 163 species: Archae - 0; Bacteria - 61; Metazoa - 117; Fungi - 104; Plants - 74; Viruses - 0; Other Eukaryotes - 584 (source: NCBI BLink). & (gnl|cdd|37086 : 391.0) no description available & (reliability: 3184.0) & (original description: Putative Sb07g013340, Description = Putative uncharacterized protein Sb07g013340, PFAM = PF08638)' T '27.3' 'RNA.regulation of transcription' 'nbv0.5scaffold7482_41288-44807' '(at1g55300 : 169.0) TBP-associated factor 7 (TAF7); FUNCTIONS IN: general RNA polymerase II transcription factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIID complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TAFII55 protein, conserved region (InterPro:IPR006751); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68237 : 106.0) no description available & (gnl|cdd|39214 : 100.0) no description available & (reliability: 338.0) & (original description: Putative Sb03g029540, Description = Putative uncharacterized protein Sb03g029540, PFAM = PF04658)' T '27.3' 'RNA.regulation of transcription' 'niben044scf00001163ctg013_1601-12342' '(at5g62090 : 396.0) SEUSS-like 2 (SLK2); BEST Arabidopsis thaliana protein match is: SEUSS-like 1 (TAIR:AT4G25520.1); Has 38958 Blast hits to 16422 proteins in 905 species: Archae - 6; Bacteria - 1880; Metazoa - 14538; Fungi - 4050; Plants - 2632; Viruses - 363; Other Eukaryotes - 15489 (source: NCBI BLink). & (reliability: 736.0) & (original description: Putative SLK3, Description = Probable transcriptional regulator SLK3, PFAM = PF01803)' T '27.3' 'RNA.regulation of transcription' 'niben044scf00005810ctg002_10053-19124' '(at1g74850 : 901.0) Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression.; plastid transcriptionally active 2 (PTAC2); INVOLVED IN: positive regulation of transcription, DNA-dependent, transcription from plastid promoter; LOCATED IN: plastid chromosome, chloroplast, nucleoid; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has 58866 Blast hits to 15377 proteins in 307 species: Archae - 6; Bacteria - 74; Metazoa - 884; Fungi - 1027; Plants - 54432; Viruses - 0; Other Eukaryotes - 2443 (source: NCBI BLink). & (q76c99|rf1_orysa : 191.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1802.0) & (original description: Putative PTAC2, Description = Pentatricopeptide repeat-containing protein At1g74850, chloroplastic, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13812)' T '27.3' 'RNA.regulation of transcription' 'niben044scf00044566ctg008_1-3076' '(at3g04740 : 524.0) encodes a protein with similarities to subunits of the Mediator complex, required for RNA polymerase II recruitment at target promoters in response to specific activators. Lines carrying loss of function mutations in the gene have reduced cell numbers in aerial organs. On the other hand, lines overexpressing the gene have increased number of small cells in clusters, suggesting cell division is more unsynchronized in the overexpressors.; STRUWWELPETER (SWP); FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: positive regulation of transcription, positive regulation of cell proliferation; LOCATED IN: mediator complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med14 (InterPro:IPR013947); Has 940 Blast hits to 375 proteins in 163 species: Archae - 0; Bacteria - 61; Metazoa - 117; Fungi - 104; Plants - 74; Viruses - 0; Other Eukaryotes - 584 (source: NCBI BLink). & (gnl|cdd|37086 : 289.0) no description available & (gnl|cdd|87582 : 127.0) no description available & (reliability: 1048.0) & (original description: Putative Os08g0332800, Description = Os08g0332800 protein, PFAM = PF08638)' T '27.3' 'RNA.regulation of transcription' 'niben044scf00044566ctg010_214-10258' '(at3g04740 : 367.0) encodes a protein with similarities to subunits of the Mediator complex, required for RNA polymerase II recruitment at target promoters in response to specific activators. Lines carrying loss of function mutations in the gene have reduced cell numbers in aerial organs. On the other hand, lines overexpressing the gene have increased number of small cells in clusters, suggesting cell division is more unsynchronized in the overexpressors.; STRUWWELPETER (SWP); FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: positive regulation of transcription, positive regulation of cell proliferation; LOCATED IN: mediator complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med14 (InterPro:IPR013947); Has 940 Blast hits to 375 proteins in 163 species: Archae - 0; Bacteria - 61; Metazoa - 117; Fungi - 104; Plants - 74; Viruses - 0; Other Eukaryotes - 584 (source: NCBI BLink). & (gnl|cdd|37086 : 107.0) no description available & (reliability: 734.0) & (original description: Putative SWP, Description = Mediator of RNA polymerase II transcription subunit 14, PFAM = )' T '27.3' 'RNA.regulation of transcription' 'niben044scf00060633ctg001_358-7710' '(at1g79730 : 479.0) Encodes a PAF1 homolog that is involved in the control of flowering time by elevating FLC expression to a level that creates the vernalization-responsive, winter-annual habit. Yeast PAF1 is a component of a five-member complex that associates with RNA pol II and is thought to regulate gene expression by recruiting SET1 (a histone 3 Lys 4 [H3-K4] methyl transferase) to the initially transcribed [5'] regions of target chromatin. Mutants display reduced H3-K4 methylation in both FLC and FLM chromatin.; EARLY FLOWERING 7 (ELF7); CONTAINS InterPro DOMAIN/s: RNA polymerase II-associated, Paf1 (InterPro:IPR007133); Has 76068 Blast hits to 37830 proteins in 1710 species: Archae - 109; Bacteria - 10838; Metazoa - 29407; Fungi - 10155; Plants - 13778; Viruses - 2155; Other Eukaryotes - 9626 (source: NCBI BLink). & (gnl|cdd|37689 : 148.0) no description available & (gnl|cdd|67594 : 115.0) no description available & (reliability: 958.0) & (original description: Putative VIP2, Description = Protein PAF1 homolog, PFAM = PF03985)' T '27.3' 'RNA.regulation of transcription' 'niben101scf00548_8916-27604' '(at1g74850 : 1254.0) Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression.; plastid transcriptionally active 2 (PTAC2); INVOLVED IN: positive regulation of transcription, DNA-dependent, transcription from plastid promoter; LOCATED IN: plastid chromosome, chloroplast, nucleoid; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has 58866 Blast hits to 15377 proteins in 307 species: Archae - 6; Bacteria - 74; Metazoa - 884; Fungi - 1027; Plants - 54432; Viruses - 0; Other Eukaryotes - 2443 (source: NCBI BLink). & (q76c99|rf1_orysa : 211.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2508.0) & (original description: Putative PTAC2, Description = Pentatricopeptide repeat-containing protein At1g74850, chloroplastic, PFAM = PF13041;PF13041;PF01535;PF13812;PF13812;PF17177;PF12854)' T '27.3' 'RNA.regulation of transcription' 'niben101scf00646_657889-662664' '(at1g76900 : 583.0) Member of TLP family; tubby like protein 1 (TLP1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 10 (TAIR:AT1G25280.1); Has 1520 Blast hits to 1117 proteins in 153 species: Archae - 0; Bacteria - 107; Metazoa - 432; Fungi - 112; Plants - 488; Viruses - 57; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|37713 : 450.0) no description available & (gnl|cdd|85281 : 348.0) no description available & (reliability: 1164.0) & (original description: Putative TULP8, Description = Tubby-like F-box protein 8, PFAM = PF01167;PF00646)' T '27.3' 'RNA.regulation of transcription' 'niben101scf00812_171373-184567' '(at5g62090 : 409.0) SEUSS-like 2 (SLK2); BEST Arabidopsis thaliana protein match is: SEUSS-like 1 (TAIR:AT4G25520.1); Has 38958 Blast hits to 16422 proteins in 905 species: Archae - 6; Bacteria - 1880; Metazoa - 14538; Fungi - 4050; Plants - 2632; Viruses - 363; Other Eukaryotes - 15489 (source: NCBI BLink). & (reliability: 740.0) & (original description: Putative M7J2, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T '27.3' 'RNA.regulation of transcription' 'niben101scf01281_847265-850232' '(at1g13870 : 416.0) Encodes a homolog of the yeast TOT4/KTI12 protein. Yeast TOT4/KTI12 associates with Elongator, a multisubunit complex that binds the RNA polymerase II transcription elongation complex. Ds insertion mutant has enlarged shoot apical region, 4 to 6 long slender leaves followed by spike-like structures, short roots.; DEFORMED ROOTS AND LEAVES 1 (DRL1); CONTAINS InterPro DOMAIN/s: Chromatin associated protein KTI12 (InterPro:IPR013641); Has 345 Blast hits to 340 proteins in 174 species: Archae - 7; Bacteria - 2; Metazoa - 117; Fungi - 134; Plants - 50; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|38272 : 318.0) no description available & (gnl|cdd|71862 : 274.0) no description available & (reliability: 832.0) & (original description: Putative Sb02g001010, Description = Putative uncharacterized protein Sb02g001010, PFAM = PF08433)' T '27.3' 'RNA.regulation of transcription' 'niben101scf01696_517291-534777' '(at3g04740 : 1605.0) encodes a protein with similarities to subunits of the Mediator complex, required for RNA polymerase II recruitment at target promoters in response to specific activators. Lines carrying loss of function mutations in the gene have reduced cell numbers in aerial organs. On the other hand, lines overexpressing the gene have increased number of small cells in clusters, suggesting cell division is more unsynchronized in the overexpressors.; STRUWWELPETER (SWP); FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: positive regulation of transcription, positive regulation of cell proliferation; LOCATED IN: mediator complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med14 (InterPro:IPR013947); Has 940 Blast hits to 375 proteins in 163 species: Archae - 0; Bacteria - 61; Metazoa - 117; Fungi - 104; Plants - 74; Viruses - 0; Other Eukaryotes - 584 (source: NCBI BLink). & (gnl|cdd|37086 : 394.0) no description available & (reliability: 3210.0) & (original description: Putative Sb07g013340, Description = Putative uncharacterized protein Sb07g013340, PFAM = PF08638)' T '27.3' 'RNA.regulation of transcription' 'niben101scf02164_542781-548870' '(at1g55300 : 219.0) TBP-associated factor 7 (TAF7); FUNCTIONS IN: general RNA polymerase II transcription factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIID complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TAFII55 protein, conserved region (InterPro:IPR006751); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68237 : 144.0) no description available & (gnl|cdd|39214 : 123.0) no description available & (reliability: 438.0) & (original description: Putative BnaAnng35590D, Description = BnaAnng35590D protein, PFAM = PF04658)' T '27.3' 'RNA.regulation of transcription' 'niben101scf02452_514819-521383' '(at1g21600 : 395.0) Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression.; plastid transcriptionally active 6 (PTAC6); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: positive regulation of transcription, DNA-dependent, transcription from plastid promoter; LOCATED IN: plastid chromosome, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 790.0) & (original description: Putative PTAC6, Description = AT1G21600 protein, PFAM = )' T '27.3' 'RNA.regulation of transcription' 'niben101scf05310_35920-39960' '(at1g25280 : 593.0) Member of TLP family; tubby like protein 10 (TLP10); FUNCTIONS IN: phosphoric diester hydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 5 (TAIR:AT1G43640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37713 : 445.0) no description available & (gnl|cdd|85281 : 343.0) no description available & (reliability: 1186.0) & (original description: Putative TULP14, Description = Tubby-like F-box protein 14, PFAM = PF01167;PF00646)' T '27.3' 'RNA.regulation of transcription' 'niben101scf06087_411014-418075' '(at5g09830 : 107.0) BolA-like family protein; CONTAINS InterPro DOMAIN/s: BolA-like protein (InterPro:IPR002634); BEST Arabidopsis thaliana protein match is: chloroplast sulfur E (TAIR:AT4G26500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38558 : 98.9) no description available & (gnl|cdd|30620 : 80.0) no description available & (reliability: 214.0) & (original description: Putative BOLA2, Description = Protein BOLA2, PFAM = PF01722)' T '27.3' 'RNA.regulation of transcription' 'niben101scf07272_187839-193147' '(at1g76900 : 578.0) Member of TLP family; tubby like protein 1 (TLP1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 10 (TAIR:AT1G25280.1); Has 1520 Blast hits to 1117 proteins in 153 species: Archae - 0; Bacteria - 107; Metazoa - 432; Fungi - 112; Plants - 488; Viruses - 57; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|37713 : 434.0) no description available & (gnl|cdd|85281 : 335.0) no description available & (reliability: 1106.0) & (original description: Putative TULP8, Description = Tubby-like F-box protein 8, PFAM = PF01167;PF00646)' T '27.3' 'RNA.regulation of transcription' 'niben101scf10650_85053-92537' '(at1g79730 : 446.0) Encodes a PAF1 homolog that is involved in the control of flowering time by elevating FLC expression to a level that creates the vernalization-responsive, winter-annual habit. Yeast PAF1 is a component of a five-member complex that associates with RNA pol II and is thought to regulate gene expression by recruiting SET1 (a histone 3 Lys 4 [H3-K4] methyl transferase) to the initially transcribed [5'] regions of target chromatin. Mutants display reduced H3-K4 methylation in both FLC and FLM chromatin.; EARLY FLOWERING 7 (ELF7); CONTAINS InterPro DOMAIN/s: RNA polymerase II-associated, Paf1 (InterPro:IPR007133); Has 76068 Blast hits to 37830 proteins in 1710 species: Archae - 109; Bacteria - 10838; Metazoa - 29407; Fungi - 10155; Plants - 13778; Viruses - 2155; Other Eukaryotes - 9626 (source: NCBI BLink). & (gnl|cdd|37689 : 146.0) no description available & (gnl|cdd|67594 : 115.0) no description available & (reliability: 892.0) & (original description: Putative ELF7, Description = RNA polymerase II-associated, Paf1, PFAM = PF03985)' T '27.3' 'RNA.regulation of transcription' 'niben101scf12983_149135-153720' '(at5g17560 : 130.0) BolA-like family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BolA-like protein (InterPro:IPR002634); BEST Arabidopsis thaliana protein match is: BolA-like family protein (TAIR:AT1G55805.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative BOLA4, Description = BolA-like family protein, PFAM = PF01722)' T '27.3' 'RNA.regulation of transcription' 'niben101scf21965_15600-22792' '(at2g33540 : 821.0) C-terminal domain phosphatase-like 3 (CPL3); FUNCTIONS IN: phosphoprotein phosphatase activity, CTD phosphatase activity; INVOLVED IN: response to salt stress; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: FCP1-like phosphatase, phosphatase domain (InterPro:IPR011947), NLI interacting factor (InterPro:IPR004274), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: C-terminal domain phosphatase-like 4 (TAIR:AT5G58003.1); Has 1686 Blast hits to 1267 proteins in 263 species: Archae - 0; Bacteria - 131; Metazoa - 483; Fungi - 269; Plants - 334; Viruses - 2; Other Eukaryotes - 467 (source: NCBI BLink). & (gnl|cdd|47876 : 152.0) no description available & (gnl|cdd|35544 : 134.0) no description available & (reliability: 1642.0) & (original description: Putative CPL3, Description = RNA polymerase II C-terminal domain phosphatase-like 4, PFAM = PF03031;PF00533)' T '27.3' 'RNA.regulation of transcription' 'niben101scf32851_15957-26118' '(at2g34640 : 546.0) Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression.; plastid transcriptionally active 12 (PTAC12); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: positive regulation of transcription, DNA-dependent, transcription from plastid promoter; LOCATED IN: plastid chromosome, chloroplast, nucleoid; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 330 Blast hits to 283 proteins in 92 species: Archae - 0; Bacteria - 6; Metazoa - 99; Fungi - 32; Plants - 40; Viruses - 9; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 1092.0) & (original description: Putative PTAC12, Description = Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, PFAM = )' T '27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'nbv0.3scaffold39620_1-4455' '(at4g32010 : 132.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative HSI2, Description = AP2/B3 transcription factor family protein, PFAM = PF07496)' T '27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'nbv0.3scaffold43859_4590-7777' '(at2g46870 : 219.0) NGATHA1 (NGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G61970.1); Has 1372 Blast hits to 1367 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1372; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|85971 : 99.0) no description available & (reliability: 438.0) & (original description: Putative Os03g0120900, Description = B3 domain-containing protein Os03g0120900, PFAM = PF02362)' T '27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'nbv0.5scaffold1757_39033-44938' '(at5g06250 : 179.0) AP2/B3-like transcriptional factor family protein; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G11580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85971 : 99.0) no description available & (reliability: 358.0) & (original description: Putative ABI2, Description = B3 DNA-binding domain protein, PFAM = PF02362)' T '27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'nbv0.5scaffold2490_130193-148841' '(at4g32010 : 490.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|85971 : 85.5) no description available & (p26307|viv1_maize : 80.1) Regulatory protein viviparous-1 - Zea mays (Maize) & (reliability: 980.0) & (original description: Putative Os07g0563300, Description = B3 domain-containing protein Os07g0563300, PFAM = PF07496;PF02362)' T '27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben044scf00004133ctg003_875-4440' '(at5g06250 : 184.0) AP2/B3-like transcriptional factor family protein; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G11580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85971 : 100.0) no description available & (reliability: 368.0) & (original description: Putative ARF31, Description = B3 domain-containing protein At2g36080, PFAM = PF02362)' T '27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben044scf00004410ctg013_1492-9731' '(at4g32010 : 331.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 662.0) & (original description: Putative HSI2, Description = AP2/B3 transcription factor family protein, PFAM = PF02362)' T '27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben044scf00008902ctg002_849-5461' '(at4g32010 : 130.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative HSI2, Description = AP2/B3 transcription factor family protein, PFAM = PF07496)' T '27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben044scf00008902ctg004_1-4655' '(at4g32010 : 286.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|85971 : 84.3) no description available & (reliability: 572.0) & (original description: Putative HSI2, Description = AP2/B3 transcription factor family protein, PFAM = PF02362)' T '27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben044scf00035571ctg007_11517-15729' '(at2g30470 : 131.0) HSI2 is a member of a novel family of B3 domain proteins with a sequence similar to the ERF-associated amphiphilic repression (EAR) motif. It functions as an active repressor of the Spo minimal promoter (derived from a gene for sweet potato sporamin A1) through the EAR motif. It contains a plant-specific B3 DNA-binding domain. The Arabidopsis genome contains 42 genes with B3 domains which could be classified into three families that are represented by ABI3, ARF1 and RAV1. HSI2 belongs to the ABI3 family. It is expressed at similar levels in all organs. Treatment with 6% sucrose showed a slight increase in transcript levels after 24 h. No changes were observed after treatment with 50µM ABA. It is localized in the nucleus via a nuclear localization sequence located in the fourth conserved region of the C-terminal B3 domain.; high-level expression of sugar-inducible gene 2 (HSI2); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: HSI2-like 1 (TAIR:AT4G32010.1); Has 1263 Blast hits to 1242 proteins in 97 species: Archae - 0; Bacteria - 5; Metazoa - 31; Fungi - 0; Plants - 1168; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative HSI2, Description = AP2/B3 transcription factor family protein, PFAM = )' T '27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf01938_174547-180303' '(at2g36080 : 195.0) Encodes a plant-specific B3 DNA-binding domain transcription factor. Has transcription repressor activity.; AP2/B3-like transcriptional factor family protein; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G06250.2); Has 1372 Blast hits to 1370 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1372; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|85971 : 100.0) no description available & (reliability: 390.0) & (original description: Putative ARF31, Description = B3 domain-containing protein At2g36080, PFAM = PF02362)' T '27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf02482_304565-313674' '(at4g32010 : 333.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 666.0) & (original description: Putative HSI2, Description = AP2/B3 transcription factor family protein, PFAM = PF02362)' T '27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf02547_243308-249821' '(at2g36080 : 193.0) Encodes a plant-specific B3 DNA-binding domain transcription factor. Has transcription repressor activity.; AP2/B3-like transcriptional factor family protein; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G06250.2); Has 1372 Blast hits to 1370 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1372; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|85971 : 103.0) no description available & (reliability: 386.0) & (original description: Putative ARF31, Description = B3 domain-containing protein At2g36080, PFAM = PF02362)' T '27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf03256_140710-163536' '(at2g30470 : 658.0) HSI2 is a member of a novel family of B3 domain proteins with a sequence similar to the ERF-associated amphiphilic repression (EAR) motif. It functions as an active repressor of the Spo minimal promoter (derived from a gene for sweet potato sporamin A1) through the EAR motif. It contains a plant-specific B3 DNA-binding domain. The Arabidopsis genome contains 42 genes with B3 domains which could be classified into three families that are represented by ABI3, ARF1 and RAV1. HSI2 belongs to the ABI3 family. It is expressed at similar levels in all organs. Treatment with 6% sucrose showed a slight increase in transcript levels after 24 h. No changes were observed after treatment with 50µM ABA. It is localized in the nucleus via a nuclear localization sequence located in the fourth conserved region of the C-terminal B3 domain.; high-level expression of sugar-inducible gene 2 (HSI2); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: HSI2-like 1 (TAIR:AT4G32010.1); Has 1263 Blast hits to 1242 proteins in 97 species: Archae - 0; Bacteria - 5; Metazoa - 31; Fungi - 0; Plants - 1168; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|85971 : 87.0) no description available & (p37398|viv_orysa : 83.6) Protein viviparous homolog - Oryza sativa (Rice) & (reliability: 1290.0) & (original description: Putative Os07g0679700, Description = B3 domain-containing protein Os07g0679700, PFAM = PF02362;PF07496)' T '27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf03274_67918-71213' '(at1g01030 : 212.0) NGATHA3 (NGA3); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT4G01500.1); Has 1380 Blast hits to 1379 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1380; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|85971 : 95.5) no description available & (reliability: 424.0) & (original description: Putative BnaC04g51560D, Description = BnaC04g51560D protein, PFAM = PF02362)' T '27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf03371_62045-69489' '(at3g26790 : 172.0) Transcriptional factor with high similarity to the B3 region of the VP1/ABI3-like proteins. Full length FUS3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of FUS3 requires the B3 DNA-binding domain and an activation domain. FUS3 specifies cotyledon identity. Regulator of gene expression during late embryogenesis. Involved in the control foliar organ identity in Arabidopsis by regulating the synthesis of two hormones, abscisic acid and gibberellin. FUS3 together with LEC1 positively regulate the abundance of the ABI3 protein in the seed.; FUSCA 3 (FUS3); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G24650.1); Has 875 Blast hits to 861 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 7; Plants - 523; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink). & (p26307|viv1_maize : 110.0) Regulatory protein viviparous-1 - Zea mays (Maize) & (reliability: 344.0) & (original description: Putative FUS3, Description = B3 domain-containing transcription factor FUS3, PFAM = PF02362)' T '27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf06222_218736-236790' '(at2g30470 : 436.0) HSI2 is a member of a novel family of B3 domain proteins with a sequence similar to the ERF-associated amphiphilic repression (EAR) motif. It functions as an active repressor of the Spo minimal promoter (derived from a gene for sweet potato sporamin A1) through the EAR motif. It contains a plant-specific B3 DNA-binding domain. The Arabidopsis genome contains 42 genes with B3 domains which could be classified into three families that are represented by ABI3, ARF1 and RAV1. HSI2 belongs to the ABI3 family. It is expressed at similar levels in all organs. Treatment with 6% sucrose showed a slight increase in transcript levels after 24 h. No changes were observed after treatment with 50µM ABA. It is localized in the nucleus via a nuclear localization sequence located in the fourth conserved region of the C-terminal B3 domain.; high-level expression of sugar-inducible gene 2 (HSI2); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: HSI2-like 1 (TAIR:AT4G32010.1); Has 1263 Blast hits to 1242 proteins in 97 species: Archae - 0; Bacteria - 5; Metazoa - 31; Fungi - 0; Plants - 1168; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|85971 : 85.5) no description available & (reliability: 822.0) & (original description: Putative Os07g0563300, Description = B3 domain-containing protein Os07g0563300, PFAM = PF07496;PF02362)' T '27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf07036_402003-405202' '(at2g46870 : 215.0) NGATHA1 (NGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G61970.1); Has 1372 Blast hits to 1367 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1372; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|85971 : 96.3) no description available & (reliability: 430.0) & (original description: Putative NGA1, Description = B3 domain-containing transcription factor NGA1, PFAM = PF02362)' T '27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf07069_15362-39912' '(at4g32010 : 489.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|85971 : 85.1) no description available & (p26307|viv1_maize : 80.1) Regulatory protein viviparous-1 - Zea mays (Maize) & (reliability: 978.0) & (original description: Putative Os07g0563300, Description = B3 domain-containing protein Os07g0563300, PFAM = PF07496;PF02362)' T '27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf07554_84746-88041' '(at2g46870 : 211.0) NGATHA1 (NGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G61970.1); Has 1372 Blast hits to 1367 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1372; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|85971 : 95.9) no description available & (reliability: 422.0) & (original description: Putative NGA1, Description = B3 domain-containing transcription factor NGA1, PFAM = PF02362)' T '27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf07850_243783-250169' '(at2g36080 : 185.0) Encodes a plant-specific B3 DNA-binding domain transcription factor. Has transcription repressor activity.; AP2/B3-like transcriptional factor family protein; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G06250.2); Has 1372 Blast hits to 1370 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1372; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|85971 : 100.0) no description available & (reliability: 370.0) & (original description: Putative ARF32, Description = B3 domain-containing protein At3g11580, PFAM = PF02362)' T '27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf07951_321495-330147' '(at4g32010 : 652.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|85971 : 80.5) no description available & (reliability: 1304.0) & (original description: Putative VAL1, Description = B3 domain-containing transcription repressor VAL1, PFAM = PF07496;PF02362)' T '27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf07951_322083-335047' '(at4g32010 : 652.0) HSI2-like 1 (HSL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 1397 Blast hits to 1364 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 1204; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|85971 : 80.5) no description available & (reliability: 1304.0) & (original description: Putative Os07g0679700, Description = B3 domain-containing protein Os07g0679700, PFAM = PF07496;PF02362)' T '27.3.1' 'RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family' 'niben101scf08157_49208-55566' '(at4g21550 : 117.0) VP1/ABI3-like 3 (VAL3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: high-level expression of sugar-inducible gene 2 (TAIR:AT2G30470.1); Has 886 Blast hits to 853 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 879; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative HSL2, Description = B3 domain-containing protein, PFAM = )' T '27.3.2' 'RNA.regulation of transcription.Alfin-like' 'nbv0.3scaffold11753_38761-42214' '(at5g05610 : 169.0) AL1 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 1 (AL1); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 2 (TAIR:AT3G11200.1); Has 1460 Blast hits to 1420 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 679; Fungi - 238; Plants - 468; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|36845 : 115.0) no description available & (reliability: 338.0) & (original description: Putative fin1, Description = PHD finger protein ALFIN-LIKE 5, PFAM = PF12165)' T '27.3.2' 'RNA.regulation of transcription.Alfin-like' 'nbv0.3scaffold17691_626-8725' '(at5g05610 : 328.0) AL1 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 1 (AL1); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 2 (TAIR:AT3G11200.1); Has 1460 Blast hits to 1420 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 679; Fungi - 238; Plants - 468; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|36845 : 178.0) no description available & (reliability: 656.0) & (original description: Putative AL1, Description = PHD finger protein ALFIN-LIKE 1, PFAM = PF00628;PF12165)' T '27.3.2' 'RNA.regulation of transcription.Alfin-like' 'nbv0.3scaffold30198_17111-23625' '(at2g02470 : 333.0) AL6 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 6 (AL6); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 7 (TAIR:AT1G14510.1). & (gnl|cdd|36845 : 194.0) no description available & (reliability: 666.0) & (original description: Putative fin1, Description = Putative alfin-like transcription factor, PFAM = PF12165;PF00628)' T '27.3.2' 'RNA.regulation of transcription.Alfin-like' 'nbv0.5scaffold338_296604-304703' '(at5g05610 : 308.0) AL1 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 1 (AL1); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 2 (TAIR:AT3G11200.1); Has 1460 Blast hits to 1420 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 679; Fungi - 238; Plants - 468; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|36845 : 179.0) no description available & (reliability: 616.0) & (original description: Putative AL1, Description = PHD finger protein ALFIN-LIKE 1, PFAM = PF00628;PF12165)' T '27.3.2' 'RNA.regulation of transcription.Alfin-like' 'nbv0.5scaffold651_643069-650338' '(at5g20510 : 314.0) AL5 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 5 (AL5); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 3 (TAIR:AT3G42790.1); Has 1720 Blast hits to 1673 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 749; Fungi - 331; Plants - 537; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|36845 : 196.0) no description available & (reliability: 628.0) & (original description: Putative AL5, Description = PHD finger protein ALFIN-LIKE 5, PFAM = PF12165;PF00628)' T '27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben044scf00015002ctg008_4929-14858' '(at2g02470 : 339.0) AL6 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 6 (AL6); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 7 (TAIR:AT1G14510.1). & (gnl|cdd|36845 : 189.0) no description available & (reliability: 678.0) & (original description: Putative fin1, Description = Putative alfin-like transcription factor, PFAM = PF00628;PF12165)' T '27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben044scf00047002ctg000_4589-11290' '(at5g05610 : 247.0) AL1 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 1 (AL1); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 2 (TAIR:AT3G11200.1); Has 1460 Blast hits to 1420 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 679; Fungi - 238; Plants - 468; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|36845 : 162.0) no description available & (reliability: 494.0) & (original description: Putative AL2, Description = Alfin-like 2 protein, PFAM = PF12165;PF00628)' T '27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf00705_26912-34001' '(at2g02470 : 329.0) AL6 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 6 (AL6); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 7 (TAIR:AT1G14510.1). & (gnl|cdd|36845 : 191.0) no description available & (reliability: 658.0) & (original description: Putative fin1, Description = Putative alfin-like transcription factor, PFAM = PF12165;PF00628)' T '27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf00736_42193-47683' '(at5g20510 : 320.0) AL5 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 5 (AL5); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 3 (TAIR:AT3G42790.1); Has 1720 Blast hits to 1673 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 749; Fungi - 331; Plants - 537; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|36845 : 199.0) no description available & (reliability: 640.0) & (original description: Putative AL5, Description = PHD finger protein ALFIN-LIKE 5, PFAM = PF00628;PF12165)' T '27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf00870_1518355-1527900' '(at5g20510 : 308.0) AL5 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 5 (AL5); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 3 (TAIR:AT3G42790.1); Has 1720 Blast hits to 1673 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 749; Fungi - 331; Plants - 537; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|36845 : 195.0) no description available & (reliability: 616.0) & (original description: Putative fin1, Description = PHD finger protein ALFIN-LIKE 5, PFAM = PF00628;PF12165)' T '27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf00870_1518358-1527736' '(at5g20510 : 306.0) AL5 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 5 (AL5); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 3 (TAIR:AT3G42790.1); Has 1720 Blast hits to 1673 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 749; Fungi - 331; Plants - 537; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|36845 : 193.0) no description available & (reliability: 612.0) & (original description: Putative fin1, Description = PHD finger protein ALFIN-LIKE 5, PFAM = PF12165;PF00628)' T '27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf02034_414603-436936' '(at5g05610 : 296.0) AL1 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 1 (AL1); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 2 (TAIR:AT3G11200.1); Has 1460 Blast hits to 1420 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 679; Fungi - 238; Plants - 468; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|36845 : 172.0) no description available & (reliability: 592.0) & (original description: Putative fin1, Description = PHD finger protein ALFIN-LIKE 5, PFAM = PF00628;PF12165)' T '27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf02269_41614-49132' '(at5g05610 : 309.0) AL1 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 1 (AL1); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 2 (TAIR:AT3G11200.1); Has 1460 Blast hits to 1420 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 679; Fungi - 238; Plants - 468; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|36845 : 174.0) no description available & (reliability: 618.0) & (original description: Putative AL1, Description = PHD finger protein ALFIN-LIKE 1, PFAM = PF00628;PF12165)' T '27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf02425_59599-64630' '(at5g20510 : 222.0) AL5 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 5 (AL5); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 3 (TAIR:AT3G42790.1); Has 1720 Blast hits to 1673 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 749; Fungi - 331; Plants - 537; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|36845 : 147.0) no description available & (reliability: 444.0) & (original description: Putative fin1, Description = PHD finger protein ALFIN-LIKE 5, PFAM = PF12165)' T '27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf03584_412320-433134' '(at5g26210 : 292.0) AL4 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 4 (AL4); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 3 (TAIR:AT3G42790.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36845 : 197.0) no description available & (reliability: 584.0) & (original description: Putative AL5, Description = PHD finger protein ALFIN-LIKE 5, PFAM = PF12165;PF00628)' T '27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf04018_688111-707900' '(at5g20510 : 283.0) AL5 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 5 (AL5); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 3 (TAIR:AT3G42790.1); Has 1720 Blast hits to 1673 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 749; Fungi - 331; Plants - 537; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|36845 : 181.0) no description available & (reliability: 566.0) & (original description: Putative fin1, Description = PHD finger protein ALFIN-LIKE 5, PFAM = PF00628;PF12165)' T '27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf04722_194140-210255' '(at5g05610 : 319.0) AL1 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 1 (AL1); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 2 (TAIR:AT3G11200.1); Has 1460 Blast hits to 1420 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 679; Fungi - 238; Plants - 468; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|36845 : 180.0) no description available & (reliability: 638.0) & (original description: Putative AL1, Description = PHD finger protein ALFIN-LIKE 1, PFAM = PF00628;PF12165)' T '27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf05307_425803-431140' '(at5g05610 : 166.0) AL1 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 1 (AL1); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 2 (TAIR:AT3G11200.1); Has 1460 Blast hits to 1420 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 679; Fungi - 238; Plants - 468; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|36845 : 116.0) no description available & (reliability: 332.0) & (original description: Putative fin1, Description = PHD finger protein ALFIN-LIKE 5, PFAM = PF12165)' T '27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf08390_58275-67637' '(at1g14510 : 350.0) AL7 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 7 (AL7); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 6 (TAIR:AT2G02470.1); Has 1825 Blast hits to 1776 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 841; Fungi - 323; Plants - 580; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|36845 : 198.0) no description available & (reliability: 700.0) & (original description: Putative fin1, Description = Putative alfin-like transcription factor, PFAM = PF00628;PF12165)' T '27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf13950_76160-83833' '(at5g20510 : 286.0) AL5 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 5 (AL5); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 3 (TAIR:AT3G42790.1); Has 1720 Blast hits to 1673 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 749; Fungi - 331; Plants - 537; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|36845 : 173.0) no description available & (reliability: 572.0) & (original description: Putative AL5, Description = PHD finger protein ALFIN-LIKE 5, PFAM = PF12165;PF00628)' T '27.3.2' 'RNA.regulation of transcription.Alfin-like' 'niben101scf15723_1011-38826' '(at5g26210 : 288.0) AL4 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 4 (AL4); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 3 (TAIR:AT3G42790.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36845 : 195.0) no description available & (reliability: 576.0) & (original description: Putative AL5, Description = PHD finger protein ALFIN-LIKE 5, PFAM = PF12165;PF00628)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold1338_83052-87097' '(at1g78080 : 180.0) Encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family (RAP2.4). The protein contains one AP2 domain. Role in mediating light and ethylene signaling.; related to AP2 4 (RAP2.4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G22190.1); Has 5853 Blast hits to 5721 proteins in 258 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 5806; Viruses - 11; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|47695 : 115.0) no description available & (reliability: 360.0) & (original description: Putative AP2, Description = Ethylene-responsive transcription factor RAP2-4, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold4589_31715-36824' '(at2g28550 : 255.0) related to AP2.7 (RAP2.7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 (TAIR:AT5G60120.1). & (q8l3u3|bbm1_brana : 127.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 90.3) no description available & (reliability: 510.0) & (original description: Putative ids1, Description = APETALA2-like protein, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold4646_52756-55805' '(at1g78080 : 156.0) Encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family (RAP2.4). The protein contains one AP2 domain. Role in mediating light and ethylene signaling.; related to AP2 4 (RAP2.4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G22190.1); Has 5853 Blast hits to 5721 proteins in 258 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 5806; Viruses - 11; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|47695 : 119.0) no description available & (reliability: 312.0) & (original description: Putative AP2, Description = Ethylene-responsive transcription factor RAP2-4, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold5540_31960-38191' '(at5g57390 : 350.0) Encodes a member of the AP2 family of transcriptional regulators.May be involved in germination and seedling growth. Mutants are resistant to ABA analogs and are resistant to high nitrogen concentrations.essential for the developmental transition between the embryonic and vegetative phases in plants.Overexpression results in the formation of somatic embryos on cotyledons.; AINTEGUMENTA-like 5 (AIL5); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G20840.1); Has 9099 Blast hits to 5771 proteins in 325 species: Archae - 0; Bacteria - 38; Metazoa - 238; Fungi - 101; Plants - 7378; Viruses - 6; Other Eukaryotes - 1338 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 317.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 92.2) no description available & (reliability: 654.0) & (original description: Putative AIL1, Description = AP2-like ethylene-responsive transcription factor, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold6248_1-6388' '(at1g16060 : 305.0) Encodes ADAP, an AP2-domain protein that interacts with ARIA. ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth.; ARIA-interacting double AP2 domain protein (ADAP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G79700.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 234.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 83.0) no description available & (reliability: 610.0) & (original description: Putative At1g16060, Description = AP2-like ethylene-responsive transcription factor At1g16060, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold8106_33270-36680' '(gnl|cdd|47695 : 96.1) no description available & (at1g28160 : 94.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5516 Blast hits to 5465 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 5459; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative bd1, Description = AP2 domain class transcription factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold8265_35324-39021' '(gnl|cdd|47695 : 116.0) no description available & (at5g64750 : 97.4) Encodes a putative transcription factor containing an AP2 domain. Is a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. Expressed in response to ABA, osmotic stress, sugar stress and drought. Mutants are hypersensitive to these stresses. May be involved in regulation of ABA mediated stress response.; ABA REPRESSOR1 (ABR1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 194.8) & (original description: Putative ap2, Description = AP2 domain class transcription factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold8443_17888-22228' '(at5g61890 : 112.0) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G07310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 106.0) no description available & (reliability: 224.0) & (original description: Putative ap2, Description = Ethylene-responsive transcription factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold8645_8729-11523' '(at5g19790 : 113.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family (RAP2.11). The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; related to AP2 11 (RAP2.11); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root hair, epidermis, primary root differentiation zone; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 4 (TAIR:AT4G27950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 103.0) no description available & (reliability: 226.0) & (original description: Putative CRF1, Description = Ethylene-responsive transcription factor RAP2-11, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold10297_17723-23895' '(at5g57390 : 361.0) Encodes a member of the AP2 family of transcriptional regulators.May be involved in germination and seedling growth. Mutants are resistant to ABA analogs and are resistant to high nitrogen concentrations.essential for the developmental transition between the embryonic and vegetative phases in plants.Overexpression results in the formation of somatic embryos on cotyledons.; AINTEGUMENTA-like 5 (AIL5); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G20840.1); Has 9099 Blast hits to 5771 proteins in 325 species: Archae - 0; Bacteria - 38; Metazoa - 238; Fungi - 101; Plants - 7378; Viruses - 6; Other Eukaryotes - 1338 (source: NCBI BLink). & (q8lsn2|bbm2_brana : 327.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (gnl|cdd|47695 : 94.2) no description available & (reliability: 666.0) & (original description: Putative Os04g0653600, Description = Os04g0653600 protein, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold14682_1-2701' '(gnl|cdd|47695 : 112.0) no description available & (q9lw49|erf4_nicsy : 96.7) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (at5g44210 : 95.1) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; erf domain protein 9 (ERF9); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ERF domain protein 10 (TAIR:AT1G03800.1); Has 6203 Blast hits to 5781 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6179; Viruses - 2; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative ERF3, Description = Ethylene response factor 3, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold15734_43402-46292' '(at5g11590 : 148.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; TINY2 (TINY2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, embryo, hypocotyl, leaf; EXPRESSED DURING: LP.10 ten leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 104.0) no description available & (reliability: 296.0) & (original description: Putative DREB3, Description = Dehydration-responsive element-binding protein 3, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold16114_29221-33646' '(gnl|cdd|47695 : 107.0) no description available & (at1g28370 : 106.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ERF domain protein 11 (ERF11); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 (TAIR:AT3G15210.1); Has 6129 Blast hits to 5763 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6120; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (q9lw49|erf4_nicsy : 102.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 210.0) & (original description: Putative ap2, Description = Ethylene response factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold16766_3772-6428' '(at4g25480 : 207.0) encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF3). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature and abscisic acid.; dehydration response element B1A (DREB1A); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: C-repeat/DRE binding factor 2 (TAIR:AT4G25470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|28902 : 91.1) no description available & (reliability: 414.0) & (original description: Putative avrl, Description = Avirulence-like protein 1, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold18406_17230-20979' '(at1g16060 : 164.0) Encodes ADAP, an AP2-domain protein that interacts with ARIA. ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth.; ARIA-interacting double AP2 domain protein (ADAP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G79700.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8lsn2|bbm2_brana : 134.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (reliability: 328.0) & (original description: Putative ADAP, Description = AP2-like ethylene-responsive transcription factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold24293_25584-29320' '(at5g13910 : 118.0) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (LEAFY PETIOLE). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. Acts as a positive regulator of gibberellic acid-induced germination.; LEAFY PETIOLE (LEP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G28160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 89.5) no description available & (q9lw49|erf4_nicsy : 81.6) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 236.0) & (original description: Putative erf, Description = Ethylene responsive transcription factor (ERF) like protein, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold27697_18782-21939' '(at1g68840 : 387.0) Rav2 is part of a complex that has been named `regulator of the (H+)-ATPase of the vacuolar and endosomal membranes' (RAVE); related to ABI3/VP1 2 (RAV2); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: AP2/B3 transcription factor family protein (TAIR:AT1G25560.1). & (gnl|cdd|85971 : 99.0) no description available & (reliability: 774.0) & (original description: Putative RAV1, Description = AP2/ERF and B3 domain-containing transcription factor RAV1, PFAM = PF00847;PF02362)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold37442_11218-17448' '(at4g13040 : 140.0) Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); Has 254 Blast hits to 244 proteins in 58 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 222; Viruses - 2; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative Os02g0499000, Description = Os02g0499000 protein, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold46215_461-3422' '(at5g52020 : 96.7) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response to fungus; LOCATED IN: chloroplast; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G12630.1); Has 5783 Blast hits to 5605 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5767; Viruses - 2; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|47695 : 96.5) no description available & (reliability: 193.4) & (original description: Putative ERF027, Description = Ethylene-responsive transcription factor ERF027, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold46873_5558-8355' '(at2g44940 : 157.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G60490.1); Has 6573 Blast hits to 6019 proteins in 323 species: Archae - 0; Bacteria - 81; Metazoa - 170; Fungi - 124; Plants - 5956; Viruses - 0; Other Eukaryotes - 242 (source: NCBI BLink). & (gnl|cdd|47695 : 103.0) no description available & (reliability: 314.0) & (original description: Putative ERF038, Description = Ethylene-responsive transcription factor ERF038, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold50106_11396-14343' '(at5g19790 : 107.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family (RAP2.11). The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; related to AP2 11 (RAP2.11); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root hair, epidermis, primary root differentiation zone; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 4 (TAIR:AT4G27950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 107.0) no description available & (reliability: 214.0) & (original description: Putative ERN, Description = ERF transcription factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold62478_3740-6462' '(at1g19210 : 141.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, C globular stage, LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G74930.1); Has 5600 Blast hits to 5488 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5592; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|47695 : 101.0) no description available & (reliability: 282.0) & (original description: Putative CEJ1, Description = Ethylene-responsive transcription factor ERF018, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold63107_1-2934' '(at1g68840 : 364.0) Rav2 is part of a complex that has been named `regulator of the (H+)-ATPase of the vacuolar and endosomal membranes' (RAVE); related to ABI3/VP1 2 (RAV2); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: AP2/B3 transcription factor family protein (TAIR:AT1G25560.1). & (gnl|cdd|85971 : 94.3) no description available & (reliability: 728.0) & (original description: Putative RAV2, Description = AP2/ERF and B3 domain-containing transcription repressor RAV2, PFAM = PF02362;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold86572_1095-4234' '(at4g27950 : 170.0) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; cytokinin response factor 4 (CRF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 3 (TAIR:AT5G53290.1); Has 6110 Blast hits to 5757 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 6087; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 114.0) no description available & (q9lw50|erf2_nicsy : 89.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (reliability: 340.0) & (original description: Putative CRF4, Description = Ethylene-responsive transcription factor CRF4, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold88331_37-3610' '(gnl|cdd|47695 : 111.0) no description available & (at5g50080 : 83.6) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; ethylene response factor 110 (ERF110); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G33710.1); Has 6196 Blast hits to 5849 proteins in 257 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6176; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative ap2, Description = Ethylene response factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.3scaffold100345_370-3846' '(gnl|cdd|47695 : 94.5) no description available & (at1g28160 : 94.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5516 Blast hits to 5465 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 5459; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative bd1, Description = AP2 domain class transcription factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold546_199674-205047' '(at3g16770 : 147.0) Encodes a member of the ERF (ethylene response factor) subfamily B-2 of the plant specific ERF/AP2 transcription factor family (RAP2.3). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.It is localized to the nucleus and acts as a transcriptional activator through the GCC-box. It has been identified as a suppressor of Bax-induced cell death by functional screening in yeast and can also suppress Bax-induced cell death in tobacco plants. Overexpression of this gene in tobacco BY-2 cells confers resistance to H2O2 and heat stresses. Overexpression in Arabidopsis causes upregulation of PDF1.2 and GST6. It is part of the ethylene signaling pathway and is predicted to act downstream of EIN2 and CTR1, but not under EIN3.; ethylene-responsive element binding protein (EBP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G47520.1); Has 5957 Blast hits to 5752 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5929; Viruses - 4; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|47695 : 114.0) no description available & (q6k7e6|erf1_orysa : 101.0) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 294.0) & (original description: Putative ap2, Description = AP2 domain-containing transcription factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold876_563594-566484' '(at5g11590 : 152.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; TINY2 (TINY2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, embryo, hypocotyl, leaf; EXPRESSED DURING: LP.10 ten leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 104.0) no description available & (reliability: 304.0) & (original description: Putative DREB3, Description = Dehydration-responsive element-binding protein 3, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold879_563773-566444' '(gnl|cdd|47695 : 110.0) no description available & (at3g15210 : 100.0) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-4). The protein contains one AP2 domain. Acts as a negative regulator of JA-responsive defense gene expression and resistance to the necrotrophic fungal pathogen Fusarium oxysporum and antagonizes JA inhibition of root elongation.; ethylene responsive element binding factor 4 (ERF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 8 (TAIR:AT1G53170.1); Has 6170 Blast hits to 5786 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6156; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (q9lw49|erf4_nicsy : 98.2) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 184.0) & (original description: Putative ERF3, Description = Ethylene response factor 3, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold1166_25018-27545' '(at3g50260 : 134.0) Encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. Involved in defense and freezing stress responses. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; cooperatively regulated by ethylene and jasmonate 1 (CEJ1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: DREB and EAR motif protein 2 (TAIR:AT5G67190.1); Has 5544 Blast hits to 5466 proteins in 235 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5538; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|47695 : 97.6) no description available & (reliability: 258.0) & (original description: Putative ERF011, Description = Ethylene-responsive transcription factor ERF011, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold1630_257324-260800' '(at5g13910 : 99.0) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (LEAFY PETIOLE). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. Acts as a positive regulator of gibberellic acid-induced germination.; LEAFY PETIOLE (LEP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G28160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 94.9) no description available & (reliability: 198.0) & (original description: Putative bd1, Description = AP2 domain class transcription factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold1916_193891-197627' '(at5g13910 : 119.0) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (LEAFY PETIOLE). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. Acts as a positive regulator of gibberellic acid-induced germination.; LEAFY PETIOLE (LEP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G28160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 89.2) no description available & (q9lw49|erf4_nicsy : 81.3) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 238.0) & (original description: Putative bd1, Description = AP2 domain class transcription factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold1916_215466-218876' '(gnl|cdd|47695 : 94.2) no description available & (at1g28160 : 92.8) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5516 Blast hits to 5465 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 5459; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative bd1, Description = AP2 domain class transcription factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold2300_278827-281543' '(at1g21910 : 112.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G77640.1); Has 6386 Blast hits to 5661 proteins in 267 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 9; Plants - 5687; Viruses - 2; Other Eukaryotes - 589 (source: NCBI BLink). & (gnl|cdd|47695 : 99.2) no description available & (reliability: 224.0) & (original description: Putative ERF012, Description = Ethylene-responsive transcription factor ERF012, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold3024_239228-242511' '(gnl|cdd|47695 : 101.0) no description available & (at5g19790 : 88.6) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family (RAP2.11). The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; related to AP2 11 (RAP2.11); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root hair, epidermis, primary root differentiation zone; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 4 (TAIR:AT4G27950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative WIN1L, Description = WIN1-like protein, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold3639_118299-126159' '(at1g16060 : 270.0) Encodes ADAP, an AP2-domain protein that interacts with ARIA. ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth.; ARIA-interacting double AP2 domain protein (ADAP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G79700.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 211.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 83.8) no description available & (reliability: 540.0) & (original description: Putative RcWRI2, Description = AP2-type transcription factor, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold3768_185878-189017' '(at2g20880 : 166.0) Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT4G28140.1); Has 5938 Blast hits to 5739 proteins in 258 species: Archae - 0; Bacteria - 4; Metazoa - 6; Fungi - 2; Plants - 5899; Viruses - 2; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|47695 : 115.0) no description available & (q6k7e6|erf1_orysa : 84.7) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 332.0) & (original description: Putative ERF054, Description = Ethylene-responsive transcription factor ERF054, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold3962_30148-70663' '(at1g22190 : 150.0) Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 4 (TAIR:AT1G78080.1); Has 5992 Blast hits to 5760 proteins in 260 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 5935; Viruses - 12; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|47695 : 120.0) no description available & (reliability: 300.0) & (original description: Putative AP2, Description = Ethylene-responsive transcription factor RAP2-4, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold4683_97170-104422' '(at5g10510 : 422.0) Encodes an AP2-domain transcription factor involved in root stem cell identity and root development.; AINTEGUMENTA-like 6 (AIL6); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: AINTEGUMENTA-like 7 (TAIR:AT5G65510.1). & (q8l3u3|bbm1_brana : 315.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 91.8) no description available & (reliability: 844.0) & (original description: Putative AIL6, Description = AP2-like ethylene-responsive transcription factor AIL6, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold5855_13914-16875' '(at5g52020 : 104.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response to fungus; LOCATED IN: chloroplast; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G12630.1); Has 5783 Blast hits to 5605 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5767; Viruses - 2; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|47695 : 97.2) no description available & (reliability: 208.0) & (original description: Putative ERF027, Description = Ethylene-responsive transcription factor ERF027, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'nbv0.5scaffold6973_24184-30742' '(at1g79700 : 281.0) Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ARIA-interacting double AP2 domain protein (TAIR:AT1G16060.1); Has 7501 Blast hits to 5104 proteins in 263 species: Archae - 0; Bacteria - 38; Metazoa - 0; Fungi - 0; Plants - 7383; Viruses - 2; Other Eukaryotes - 78 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 238.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (reliability: 562.0) & (original description: Putative ADAP, Description = AP2-like ethylene-responsive transcription factor, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00003259ctg023_692-6019' '(at2g28550 : 330.0) related to AP2.7 (RAP2.7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 (TAIR:AT5G60120.1). & (q8l3u3|bbm1_brana : 140.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 89.9) no description available & (reliability: 660.0) & (original description: Putative ids1, Description = APETALA2-like protein, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00004141ctg001_4645-7490' '(at3g50260 : 135.0) Encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. Involved in defense and freezing stress responses. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; cooperatively regulated by ethylene and jasmonate 1 (CEJ1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: DREB and EAR motif protein 2 (TAIR:AT5G67190.1); Has 5544 Blast hits to 5466 proteins in 235 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5538; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|47695 : 94.9) no description available & (reliability: 270.0) & (original description: Putative ERF008, Description = Ethylene-responsive transcription factor ERF008, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00004774ctg002_219-10247' '(at1g51190 : 350.0) Encodes a member of the AINTEGUMENTA-like (AIL) subclass of the AP2/EREBP family of transcription factors and is essential for quiescent center (QC) specification and stem cell activity. It is a key effector for establishment of the stem cell niche during embryonic pattern formation. It is transcribed in response to auxin accumulation and is dependent on auxin response transcription factors.; PLETHORA 2 (PLT2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G20840.1); Has 7787 Blast hits to 5250 proteins in 253 species: Archae - 0; Bacteria - 8; Metazoa - 4; Fungi - 0; Plants - 7694; Viruses - 2; Other Eukaryotes - 79 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 290.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 87.2) no description available & (reliability: 672.0) & (original description: Putative AIL1, Description = AP2-like ethylene-responsive transcription factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00005599ctg021_9898-14490' '(at1g28370 : 106.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ERF domain protein 11 (ERF11); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 (TAIR:AT3G15210.1); Has 6129 Blast hits to 5763 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6120; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|47695 : 106.0) no description available & (q9lw49|erf4_nicsy : 102.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 206.0) & (original description: Putative ap2, Description = Ethylene response factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00006275ctg011_3041-9198' '(at2g28550 : 302.0) related to AP2.7 (RAP2.7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 (TAIR:AT5G60120.1). & (q8l3u3|bbm1_brana : 122.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 88.4) no description available & (reliability: 604.0) & (original description: Putative TOE2, Description = AP2-like ethylene-responsive transcription factor TOE2, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00006372ctg012_1-5762' '(q8lsn2|bbm2_brana : 377.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (at5g17430 : 366.0) Encodes an AP2-domain containing protein similar to ANT. Expressed in embryos and lateral root primordium.; BABY BOOM (BBM); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G51190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47695 : 93.4) no description available & (reliability: 732.0) & (original description: Putative BBM1, Description = AP2-like ethylene-responsive transcription factor BBM1, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00007057ctg004_11355-13945' '(at2g36450 : 114.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Ectopic overexpression of HRD increases the density of the root network and improves water and salt stress tolerance in Arabidopsis. Overexpression of HRD in rice causes an increase in plant biomass and drought resistance.; HARDY (HRD); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: C-repeat-binding factor 4 (TAIR:AT5G51990.1); Has 5681 Blast hits to 5646 proteins in 245 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 5670; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|47695 : 92.2) no description available & (reliability: 228.0) & (original description: Putative ERF024, Description = Ethylene-responsive transcription factor ERF024, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00007307ctg012_16967-20001' '(at5g61890 : 119.0) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G07310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 111.0) no description available & (q6k7e6|erf1_orysa : 83.2) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 238.0) & (original description: Putative ERF113, Description = Ethylene-responsive transcription factor ERF113, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00007363ctg002_23988-26731' '(q6k7e6|erf1_orysa : 143.0) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (at1g53910 : 113.0) encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.12). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.; related to AP2 12 (RAP2.12); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 2 (TAIR:AT3G14230.2); Has 6180 Blast hits to 5848 proteins in 262 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 6130; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|47695 : 108.0) no description available & (reliability: 226.0) & (original description: Putative erebp, Description = Transcription factor EREBP-like protein, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00010738ctg003_23716-25555' '(gnl|cdd|47695 : 102.0) no description available & (at5g13330 : 96.7) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; related to AP2 6l (Rap2.6L); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative ap2, Description = Ethylene-responsive transcription factor ERF114 family, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00011165ctg020_3933-6546' '(at1g71450 : 136.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G33760.1); Has 5936 Blast hits to 5716 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5928; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|47695 : 103.0) no description available & (reliability: 272.0) & (original description: Putative ERF021, Description = Ethylene-responsive transcription factor ERF021, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00012878ctg023_350-3561' '(at2g20880 : 165.0) Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT4G28140.1); Has 5938 Blast hits to 5739 proteins in 258 species: Archae - 0; Bacteria - 4; Metazoa - 6; Fungi - 2; Plants - 5899; Viruses - 2; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|47695 : 115.0) no description available & (q6k7e6|erf1_orysa : 84.0) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 330.0) & (original description: Putative dreb5, Description = Drought responsive element binding protein 5, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00013906ctg011_3443-9030' '(at2g41710 : 358.0) Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G54320.1). & (q8l3u3|bbm1_brana : 137.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (reliability: 716.0) & (original description: Putative At2g41710, Description = AP2-like ethylene-responsive transcription factor At2g41710, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00016864ctg004_1-1657' '(at5g18560 : 163.0) Encodes PUCHI, a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. PUCHI is required for morphogenesis in the early lateral root primordium of Arabidopsis. Expressed in early floral meristem (stage 1 to 2). Required for early floral meristem growth and for bract suppression. Triple mutant with bop1 and bop2 displays a strong defect in the determination of floral meristem identity with reduced LFY expression and the lack of AP1 expression.; PUCHI; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5489 Blast hits to 5364 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 5473; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|47695 : 103.0) no description available & (q9lw49|erf4_nicsy : 85.9) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 326.0) & (original description: Putative ERF086, Description = Ethylene-responsive transcription factor ERF086, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00018136ctg003_5754-9874' '(at1g78080 : 179.0) Encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family (RAP2.4). The protein contains one AP2 domain. Role in mediating light and ethylene signaling.; related to AP2 4 (RAP2.4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G22190.1); Has 5853 Blast hits to 5721 proteins in 258 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 5806; Viruses - 11; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|47695 : 115.0) no description available & (reliability: 358.0) & (original description: Putative ERF8, Description = ERF transcription factor 8, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00018810ctg010_1191-5379' '(at2g28550 : 286.0) related to AP2.7 (RAP2.7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 (TAIR:AT5G60120.1). & (q8l3u3|bbm1_brana : 139.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 87.6) no description available & (reliability: 572.0) & (original description: Putative Ap2B, Description = PHAP2B protein, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00020875ctg009_26232-29528' '(gnl|cdd|47695 : 93.8) no description available & (at5g13910 : 89.7) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (LEAFY PETIOLE). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. Acts as a positive regulator of gibberellic acid-induced germination.; LEAFY PETIOLE (LEP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G28160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative LEP, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00023762ctg013_257-6304' '(at1g16060 : 290.0) Encodes ADAP, an AP2-domain protein that interacts with ARIA. ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth.; ARIA-interacting double AP2 domain protein (ADAP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G79700.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 214.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 84.5) no description available & (reliability: 580.0) & (original description: Putative At1g16060, Description = AP2-like ethylene-responsive transcription factor At1g16060, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00023762ctg013_722-6241' '(at1g16060 : 268.0) Encodes ADAP, an AP2-domain protein that interacts with ARIA. ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth.; ARIA-interacting double AP2 domain protein (ADAP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G79700.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8lsn2|bbm2_brana : 222.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (reliability: 536.0) & (original description: Putative ADAP, Description = AP2-like ethylene-responsive transcription factor, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00026409ctg002_1-3090' '(at1g79700 : 93.6) Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ARIA-interacting double AP2 domain protein (TAIR:AT1G16060.1); Has 7501 Blast hits to 5104 proteins in 263 species: Archae - 0; Bacteria - 38; Metazoa - 0; Fungi - 0; Plants - 7383; Viruses - 2; Other Eukaryotes - 78 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative ADAP, Description = Ethylene-responsive transcription factor WRI1, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00027758ctg005_2600-5330' '(at4g27950 : 107.0) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; cytokinin response factor 4 (CRF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 3 (TAIR:AT5G53290.1); Has 6110 Blast hits to 5757 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 6087; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 104.0) no description available & (q40477|erf4_tobac : 86.7) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NtERF3) - Nicotiana tabacum (Common tobacco) & (reliability: 214.0) & (original description: Putative CRF1, Description = Ethylene-responsive transcription factor CRF4, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00028930ctg006_5175-8323' '(at2g20880 : 176.0) Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT4G28140.1); Has 5938 Blast hits to 5739 proteins in 258 species: Archae - 0; Bacteria - 4; Metazoa - 6; Fungi - 2; Plants - 5899; Viruses - 2; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|47695 : 115.0) no description available & (q6k7e6|erf1_orysa : 82.8) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 352.0) & (original description: Putative ERF054, Description = Ethylene-responsive transcription factor ERF054, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00032853ctg020_1-2932' '(at1g64380 : 189.0) encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 4 (TAIR:AT1G78080.1); Has 5953 Blast hits to 5757 proteins in 257 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 5926; Viruses - 6; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|47695 : 109.0) no description available & (reliability: 378.0) & (original description: Putative ERF061, Description = Ethylene-responsive transcription factor ERF061, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00037233ctg013_10088-14086' '(at3g54320 : 274.0) WRINKLED1 encodes transcription factor of the AP2/ERWEBP class. Protein has two plant-specific (AP2/EREB) DNA-binding domains and is involved in the control of storage compound biosynthesis in Arabidopsis. Mutants have wrinkled seed phenotype, due to a defect in the incorporation of sucrose and glucose into triacylglycerols. Transgenic sGsL plants (21-day-old) grown on 6% sucrose for 24 hours had 2-fold increase in levels of expressions (sGsL line carries a single copy of T-DNA containing the Spomin::GUS-Spomin::LUC dual reporter genes in the upper arm of chromosome 5 of ecotype Col-0. The sporamin .minimal. promoter directs sugar-inducible expression of the LUC and GUS reporters in leaves). Regulation by LEC2 promotes fatty acid accumulation during seed maturation.; WRINKLED 1 (WRI1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G79700.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 248.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 87.6) no description available & (reliability: 498.0) & (original description: Putative WRI1, Description = WRI1, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00038737ctg003_842-3339' '(gnl|cdd|47695 : 97.6) no description available & (at4g23750 : 86.7) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Monopteros target gene.; cytokinin response factor 2 (CRF2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 1 (TAIR:AT4G11140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative CRF7, Description = CRF7, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00044056ctg003_1-2489' '(at5g18560 : 163.0) Encodes PUCHI, a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. PUCHI is required for morphogenesis in the early lateral root primordium of Arabidopsis. Expressed in early floral meristem (stage 1 to 2). Required for early floral meristem growth and for bract suppression. Triple mutant with bop1 and bop2 displays a strong defect in the determination of floral meristem identity with reduced LFY expression and the lack of AP1 expression.; PUCHI; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5489 Blast hits to 5364 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 5473; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|47695 : 104.0) no description available & (q9lw49|erf4_nicsy : 87.4) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 326.0) & (original description: Putative erf, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00046725ctg003_992-3965' '(at4g39780 : 150.0) encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G22200.1); Has 5858 Blast hits to 5712 proteins in 253 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 5812; Viruses - 11; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|47695 : 119.0) no description available & (reliability: 300.0) & (original description: Putative AP2, Description = Ethylene-responsive transcription factor RAP2-4, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00046906ctg008_1816-4451' '(at5g11590 : 172.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; TINY2 (TINY2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, embryo, hypocotyl, leaf; EXPRESSED DURING: LP.10 ten leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 104.0) no description available & (reliability: 344.0) & (original description: Putative DREB3, Description = Dehydration-responsive element-binding protein 3, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00047330ctg008_17023-22823' '(at3g16770 : 154.0) Encodes a member of the ERF (ethylene response factor) subfamily B-2 of the plant specific ERF/AP2 transcription factor family (RAP2.3). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.It is localized to the nucleus and acts as a transcriptional activator through the GCC-box. It has been identified as a suppressor of Bax-induced cell death by functional screening in yeast and can also suppress Bax-induced cell death in tobacco plants. Overexpression of this gene in tobacco BY-2 cells confers resistance to H2O2 and heat stresses. Overexpression in Arabidopsis causes upregulation of PDF1.2 and GST6. It is part of the ethylene signaling pathway and is predicted to act downstream of EIN2 and CTR1, but not under EIN3.; ethylene-responsive element binding protein (EBP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G47520.1); Has 5957 Blast hits to 5752 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5929; Viruses - 4; Other Eukaryotes - 24 (source: NCBI BLink). & (q6k7e6|erf1_orysa : 111.0) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (gnl|cdd|47695 : 110.0) no description available & (reliability: 308.0) & (original description: Putative ap2, Description = AP2 domain-containing transcription factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00050167ctg002_29753-36025' '(at5g57390 : 363.0) Encodes a member of the AP2 family of transcriptional regulators.May be involved in germination and seedling growth. Mutants are resistant to ABA analogs and are resistant to high nitrogen concentrations.essential for the developmental transition between the embryonic and vegetative phases in plants.Overexpression results in the formation of somatic embryos on cotyledons.; AINTEGUMENTA-like 5 (AIL5); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G20840.1); Has 9099 Blast hits to 5771 proteins in 325 species: Archae - 0; Bacteria - 38; Metazoa - 238; Fungi - 101; Plants - 7378; Viruses - 6; Other Eukaryotes - 1338 (source: NCBI BLink). & (q8lsn2|bbm2_brana : 327.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (gnl|cdd|47695 : 94.2) no description available & (reliability: 666.0) & (original description: Putative AIL5, Description = AP2-like ethylene-responsive transcription factor AIL5, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben044scf00061597ctg001_1-2600' '(at1g16060 : 191.0) Encodes ADAP, an AP2-domain protein that interacts with ARIA. ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth.; ARIA-interacting double AP2 domain protein (ADAP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G79700.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 137.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (reliability: 382.0) & (original description: Putative ADAP, Description = AP2-like ethylene-responsive transcription factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101ctg16385_1478-4104' '(at4g25480 : 189.0) encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF3). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature and abscisic acid.; dehydration response element B1A (DREB1A); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: C-repeat/DRE binding factor 2 (TAIR:AT4G25470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|28902 : 88.0) no description available & (reliability: 378.0) & (original description: Putative avrl, Description = Avirulence-like protein 1, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00113_284591-290453' '(at4g13040 : 140.0) Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); Has 254 Blast hits to 244 proteins in 58 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 222; Viruses - 2; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative Os02g0499000, Description = Os02g0499000 protein, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00177_261076-263651' '(at5g18450 : 138.0) encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, seed; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G75490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 97.2) no description available & (q6k7e6|erf1_orysa : 85.1) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 276.0) & (original description: Putative DRF1, Description = AP2 transcriptional activator variant, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00262_472799-475551' '(at5g53290 : 110.0) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; cytokinin response factor 3 (CRF3); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 4 (TAIR:AT4G27950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 108.0) no description available & (q40477|erf4_tobac : 92.4) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NtERF3) - Nicotiana tabacum (Common tobacco) & (reliability: 220.0) & (original description: Putative PTI6, Description = Pathogenesis-related genes transcriptional activator PTI6, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00282_242990-245655' '(at4g25490 : 208.0) Transcriptional activator that binds to the DRE/CRT regulatory element and induces COR (cold-regulated) gene expression increasing plant freezing tolerance. It encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature and abscisic acid.; C-repeat/DRE binding factor 1 (CBF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: C-repeat/DRE binding factor 2 (TAIR:AT4G25470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|28902 : 92.6) no description available & (reliability: 416.0) & (original description: Putative avrl, Description = Avirulence-like protein 1, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00298_6492-9160' '(at1g19210 : 173.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, C globular stage, LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G74930.1); Has 5600 Blast hits to 5488 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5592; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|47695 : 102.0) no description available & (reliability: 346.0) & (original description: Putative ERF017, Description = Ethylene-responsive transcription factor ERF017, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00482_797604-802904' '(at2g28550 : 297.0) related to AP2.7 (RAP2.7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 (TAIR:AT5G60120.1). & (q8l3u3|bbm1_brana : 115.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 88.4) no description available & (reliability: 594.0) & (original description: Putative ids1, Description = APETALA2-like protein, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00496_254230-259383' '(at2g28550 : 295.0) related to AP2.7 (RAP2.7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 (TAIR:AT5G60120.1). & (q8l3u3|bbm1_brana : 141.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 90.7) no description available & (reliability: 590.0) & (original description: Putative Ap2B, Description = PHAP2B protein, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00503_748494-751387' '(at4g27950 : 124.0) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; cytokinin response factor 4 (CRF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 3 (TAIR:AT5G53290.1); Has 6110 Blast hits to 5757 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 6087; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 115.0) no description available & (q40477|erf4_tobac : 96.7) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NtERF3) - Nicotiana tabacum (Common tobacco) & (reliability: 248.0) & (original description: Putative CRF1, Description = Ethylene response factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00530_151506-154645' '(at4g27950 : 173.0) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; cytokinin response factor 4 (CRF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 3 (TAIR:AT5G53290.1); Has 6110 Blast hits to 5757 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 6087; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 114.0) no description available & (q9lw50|erf2_nicsy : 89.4) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) - Nicotiana sylvestris (Wood tobacco) & (reliability: 346.0) & (original description: Putative CRF4, Description = Ethylene-responsive transcription factor CRF4, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00546_8541-17787' '(at1g16060 : 322.0) Encodes ADAP, an AP2-domain protein that interacts with ARIA. ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth.; ARIA-interacting double AP2 domain protein (ADAP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G79700.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 228.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 84.9) no description available & (reliability: 644.0) & (original description: Putative At1g16060, Description = AP2-like ethylene-responsive transcription factor At1g16060, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00577_1125940-1129243' '(at1g68550 : 102.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G25890.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47695 : 87.2) no description available & (reliability: 204.0) & (original description: Putative LjERF18, Description = Ethylene-responsive transcription factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00603_197022-202826' '(at1g01250 : 142.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25810.1); Has 5404 Blast hits to 5361 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5399; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|47695 : 94.9) no description available & (reliability: 284.0) & (original description: Putative AP2D33, Description = AP2 domain class transcription factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00735_278663-281260' '(at3g57600 : 209.0) encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G18450.1); Has 5751 Blast hits to 5635 proteins in 247 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5730; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 106.0) no description available & (reliability: 418.0) & (original description: Putative DREB2F, Description = Dehydration-responsive element-binding protein 2F, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00753_126343-129329' '(at1g68550 : 103.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G25890.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47695 : 87.6) no description available & (reliability: 206.0) & (original description: Putative LjERF18, Description = Ethylene-responsive transcription factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00784_156938-159504' '(at2g36450 : 143.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Ectopic overexpression of HRD increases the density of the root network and improves water and salt stress tolerance in Arabidopsis. Overexpression of HRD in rice causes an increase in plant biomass and drought resistance.; HARDY (HRD); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: C-repeat-binding factor 4 (TAIR:AT5G51990.1); Has 5681 Blast hits to 5646 proteins in 245 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 5670; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|47695 : 91.5) no description available & (reliability: 286.0) & (original description: Putative ERF024, Description = Ethylene-responsive transcription factor ERF024, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00839_7641-12066' '(gnl|cdd|47695 : 106.0) no description available & (at1g28370 : 105.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; ERF domain protein 11 (ERF11); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 (TAIR:AT3G15210.1); Has 6129 Blast hits to 5763 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6120; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (q9lw49|erf4_nicsy : 101.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 208.0) & (original description: Putative ap2, Description = Ethylene response factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf00870_510295-514483' '(q6k7e6|erf1_orysa : 184.0) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (at1g53910 : 182.0) encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.12). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.; related to AP2 12 (RAP2.12); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 2 (TAIR:AT3G14230.2); Has 6180 Blast hits to 5848 proteins in 262 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 6130; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|47695 : 109.0) no description available & (reliability: 364.0) & (original description: Putative erf1, Description = Ethylene transcription factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01001_641033-647896' '(gnl|cdd|47695 : 100.0) no description available & (at4g11140 : 80.1) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Also named as CRF1 (cytokinin response factor 1).; cytokinin response factor 1 (CRF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 2 (TAIR:AT4G23750.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative AP2, Description = Ethylene-responsive transcription factor CRF4, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01035_418042-423242' '(at2g28550 : 254.0) related to AP2.7 (RAP2.7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 (TAIR:AT5G60120.1). & (q8l3u3|bbm1_brana : 127.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 89.9) no description available & (reliability: 508.0) & (original description: Putative ids1, Description = APETALA2-like protein, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01085_355513-358265' '(at4g27950 : 120.0) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; cytokinin response factor 4 (CRF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 3 (TAIR:AT5G53290.1); Has 6110 Blast hits to 5757 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 6087; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 112.0) no description available & (q9lw49|erf4_nicsy : 92.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 240.0) & (original description: Putative PTI6, Description = Pathogenesis-related genes transcriptional activator PTI6, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01295_571803-574927' '(at5g18560 : 162.0) Encodes PUCHI, a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. PUCHI is required for morphogenesis in the early lateral root primordium of Arabidopsis. Expressed in early floral meristem (stage 1 to 2). Required for early floral meristem growth and for bract suppression. Triple mutant with bop1 and bop2 displays a strong defect in the determination of floral meristem identity with reduced LFY expression and the lack of AP1 expression.; PUCHI; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5489 Blast hits to 5364 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 5473; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|47695 : 104.0) no description available & (q9lw49|erf4_nicsy : 87.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 324.0) & (original description: Putative erf, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01297_120720-124162' '(at2g40350 : 123.0) encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G40340.1); Has 4959 Blast hits to 4957 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4951; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|47695 : 108.0) no description available & (reliability: 246.0) & (original description: Putative ap2, Description = AP2 domain containing protein, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01374_578308-581045' '(at5g11590 : 133.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; TINY2 (TINY2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, embryo, hypocotyl, leaf; EXPRESSED DURING: LP.10 ten leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 103.0) no description available & (reliability: 266.0) & (original description: Putative CBF7, Description = Dehydration-responsive element-binding protein 3, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01430_24824-27671' '(at2g47520 : 125.0) encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.; HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 2 (HRE2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding protein (TAIR:AT3G16770.1); Has 6285 Blast hits to 5826 proteins in 255 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6266; Viruses - 2; Other Eukaryotes - 15 (source: NCBI BLink). & (q6k7e6|erf1_orysa : 110.0) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (gnl|cdd|47695 : 95.3) no description available & (reliability: 250.0) & (original description: Putative ERF2, Description = Ethylene responsive factor 2, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01438_425216-431447' '(at5g57390 : 348.0) Encodes a member of the AP2 family of transcriptional regulators.May be involved in germination and seedling growth. Mutants are resistant to ABA analogs and are resistant to high nitrogen concentrations.essential for the developmental transition between the embryonic and vegetative phases in plants.Overexpression results in the formation of somatic embryos on cotyledons.; AINTEGUMENTA-like 5 (AIL5); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G20840.1); Has 9099 Blast hits to 5771 proteins in 325 species: Archae - 0; Bacteria - 38; Metazoa - 238; Fungi - 101; Plants - 7378; Viruses - 6; Other Eukaryotes - 1338 (source: NCBI BLink). & (q8lsn2|bbm2_brana : 317.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (gnl|cdd|47695 : 91.8) no description available & (reliability: 654.0) & (original description: Putative AIL1, Description = AP2-like ethylene-responsive transcription factor, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01453_1176434-1180264' '(gnl|cdd|47695 : 111.0) no description available & (at5g50080 : 82.0) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; ethylene response factor 110 (ERF110); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G33710.1); Has 6196 Blast hits to 5849 proteins in 257 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6176; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative ap2, Description = Ethylene-responsive transcription factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01518_838272-841300' '(at1g68550 : 97.1) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G25890.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|28902 : 89.2) no description available & (reliability: 194.2) & (original description: Putative ap2, Description = Ethylene-responsive transcription factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01539_1-1998' '(at5g11590 : 168.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; TINY2 (TINY2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, embryo, hypocotyl, leaf; EXPRESSED DURING: LP.10 ten leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 100.0) no description available & (reliability: 336.0) & (original description: Putative TINY, Description = Dehydration-responsive element binding protein, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01611_1170855-1173496' '(at5g11590 : 172.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; TINY2 (TINY2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, embryo, hypocotyl, leaf; EXPRESSED DURING: LP.10 ten leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 104.0) no description available & (reliability: 344.0) & (original description: Putative DREB3, Description = Dehydration-responsive element-binding protein 3, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01701_314206-316940' '(at1g75490 : 128.0) encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G18450.1); Has 5736 Blast hits to 5602 proteins in 247 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5714; Viruses - 6; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|47695 : 95.3) no description available & (reliability: 256.0) & (original description: Putative DREB2D, Description = Dehydration-responsive element-binding protein 2D, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01817_88639-91709' '(at4g23750 : 155.0) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Monopteros target gene.; cytokinin response factor 2 (CRF2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 1 (TAIR:AT4G11140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47695 : 107.0) no description available & (q9lw49|erf4_nicsy : 91.3) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 310.0) & (original description: Putative CRF2, Description = Ethylene-responsive transcription factor CRF2, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01818_782696-786107' '(at1g28160 : 109.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5516 Blast hits to 5465 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 5459; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|47695 : 87.2) no description available & (reliability: 210.0) & (original description: Putative bd1, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf01818_801154-804630' '(gnl|cdd|47695 : 94.2) no description available & (at1g28160 : 94.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5516 Blast hits to 5465 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 5459; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative bd1, Description = AP2 domain class transcription factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf02219_200002-203099' '(at1g78080 : 177.0) Encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family (RAP2.4). The protein contains one AP2 domain. Role in mediating light and ethylene signaling.; related to AP2 4 (RAP2.4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G22190.1); Has 5853 Blast hits to 5721 proteins in 258 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 5806; Viruses - 11; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|47695 : 113.0) no description available & (reliability: 354.0) & (original description: Putative ERF056, Description = Ethylene-responsive transcription factor ERF056, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf02242_11863-363060' '(gnl|cdd|47695 : 117.0) no description available & (at5g64750 : 85.5) Encodes a putative transcription factor containing an AP2 domain. Is a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. Expressed in response to ABA, osmotic stress, sugar stress and drought. Mutants are hypersensitive to these stresses. May be involved in regulation of ABA mediated stress response.; ABA REPRESSOR1 (ABR1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative ap2, Description = Ethylene response factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf02316_278334-281086' '(at4g27950 : 106.0) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; cytokinin response factor 4 (CRF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 3 (TAIR:AT5G53290.1); Has 6110 Blast hits to 5757 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 6087; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 104.0) no description available & (q40477|erf4_tobac : 85.1) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NtERF3) - Nicotiana tabacum (Common tobacco) & (reliability: 212.0) & (original description: Putative PTI6, Description = Pathogenesis-related genes transcriptional activator PTI6, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf02369_412347-417544' '(at2g28550 : 312.0) related to AP2.7 (RAP2.7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 (TAIR:AT5G60120.1). & (q8l3u3|bbm1_brana : 139.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 88.8) no description available & (reliability: 624.0) & (original description: Putative ids1, Description = APETALA2-like protein, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf02437_821419-824087' '(at1g19210 : 154.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, C globular stage, LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G74930.1); Has 5600 Blast hits to 5488 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5592; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|47695 : 101.0) no description available & (reliability: 308.0) & (original description: Putative ERF017, Description = Ethylene-responsive transcription factor ERF017, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf02475_797901-800848' '(at5g19790 : 107.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family (RAP2.11). The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; related to AP2 11 (RAP2.11); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root hair, epidermis, primary root differentiation zone; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 4 (TAIR:AT4G27950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 106.0) no description available & (reliability: 214.0) & (original description: Putative ERN, Description = ERF transcription factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf02540_45858-52030' '(at5g57390 : 365.0) Encodes a member of the AP2 family of transcriptional regulators.May be involved in germination and seedling growth. Mutants are resistant to ABA analogs and are resistant to high nitrogen concentrations.essential for the developmental transition between the embryonic and vegetative phases in plants.Overexpression results in the formation of somatic embryos on cotyledons.; AINTEGUMENTA-like 5 (AIL5); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G20840.1); Has 9099 Blast hits to 5771 proteins in 325 species: Archae - 0; Bacteria - 38; Metazoa - 238; Fungi - 101; Plants - 7378; Viruses - 6; Other Eukaryotes - 1338 (source: NCBI BLink). & (q8lsn2|bbm2_brana : 331.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (gnl|cdd|47695 : 94.5) no description available & (reliability: 672.0) & (original description: Putative AIL5, Description = AIL5, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf02726_348064-353460' '(at4g27950 : 177.0) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; cytokinin response factor 4 (CRF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 3 (TAIR:AT5G53290.1); Has 6110 Blast hits to 5757 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 6087; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 113.0) no description available & (q40477|erf4_tobac : 91.3) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NtERF3) - Nicotiana tabacum (Common tobacco) & (reliability: 354.0) & (original description: Putative CRF4, Description = Ethylene-responsive transcription factor CRF4, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf02972_61205-120266' '(at1g64380 : 189.0) encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 4 (TAIR:AT1G78080.1); Has 5953 Blast hits to 5757 proteins in 257 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 5926; Viruses - 6; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|47695 : 109.0) no description available & (reliability: 378.0) & (original description: Putative ERF061, Description = Ethylene-responsive transcription factor ERF061, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03092_54741-57469' '(at1g12610 : 119.0) Encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (DDF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. Overexpression of this gene results in delayed flowering and dwarfism, reduction of gibberellic acid biosynthesis, and increased tolerance to high levels of salt. This gene is expressed in all tissues examined, but most abundantly expressed in upper stems. Overexpression of this gene is also correlated with increased expression of GA biosynthetic genes and RD29A (a cold and drought responsive gene). Under salt stress it induces the expression of GAOX7, which encodes ad C20-GA inhibitor.; DWARF AND DELAYED FLOWERING 1 (DDF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G63030.2); Has 5207 Blast hits to 5205 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5202; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|28902 : 88.4) no description available & (reliability: 238.0) & (original description: Putative avrl, Description = C-repeat binding factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03150_587452-590609' '(at1g68840 : 379.0) Rav2 is part of a complex that has been named `regulator of the (H+)-ATPase of the vacuolar and endosomal membranes' (RAVE); related to ABI3/VP1 2 (RAV2); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: AP2/B3 transcription factor family protein (TAIR:AT1G25560.1). & (gnl|cdd|85971 : 98.6) no description available & (reliability: 758.0) & (original description: Putative RAV1, Description = AP2/ERF and B3 domain-containing transcription factor RAV1, PFAM = PF00847;PF02362)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03223_25314-27730' '(at1g46768 : 124.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.1). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.9 and RAP2.10.; related to AP2 1 (RAP2.1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 10 (TAIR:AT4G36900.1); Has 5681 Blast hits to 5559 proteins in 243 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5675; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|47695 : 91.5) no description available & (reliability: 248.0) & (original description: Putative CEJ1, Description = Dehydration responsive element binding protein, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03245_424006-426704' '(at4g25480 : 201.0) encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF3). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature and abscisic acid.; dehydration response element B1A (DREB1A); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: C-repeat/DRE binding factor 2 (TAIR:AT4G25470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|28902 : 94.6) no description available & (reliability: 402.0) & (original description: Putative avrl, Description = Avirulence-like protein 1, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03245_483547-491556' '(at4g25480 : 207.0) encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF3). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature and abscisic acid.; dehydration response element B1A (DREB1A); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: C-repeat/DRE binding factor 2 (TAIR:AT4G25470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|28902 : 88.0) no description available & (reliability: 414.0) & (original description: Putative cbf, Description = CRT/DRE binding factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03245_662475-665035' '(at5g52020 : 119.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response to fungus; LOCATED IN: chloroplast; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G12630.1); Has 5783 Blast hits to 5605 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5767; Viruses - 2; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|47695 : 86.1) no description available & (reliability: 238.0) & (original description: Putative ERF1, Description = Ethylene-responsive transcription factor 1, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03314_67689-70153' '(at5g67190 : 153.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; DREB and EAR motif protein 2 (DEAR2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cooperatively regulated by ethylene and jasmonate 1 (TAIR:AT3G50260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 98.8) no description available & (reliability: 306.0) & (original description: Putative ERF011, Description = Ethylene-responsive transcription factor ERF011, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03321_140778-143476' '(at1g12610 : 107.0) Encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (DDF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. Overexpression of this gene results in delayed flowering and dwarfism, reduction of gibberellic acid biosynthesis, and increased tolerance to high levels of salt. This gene is expressed in all tissues examined, but most abundantly expressed in upper stems. Overexpression of this gene is also correlated with increased expression of GA biosynthetic genes and RD29A (a cold and drought responsive gene). Under salt stress it induces the expression of GAOX7, which encodes ad C20-GA inhibitor.; DWARF AND DELAYED FLOWERING 1 (DDF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G63030.2); Has 5207 Blast hits to 5205 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5202; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|28902 : 81.8) no description available & (reliability: 214.0) & (original description: Putative avrl, Description = C-repeat binding factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03437_351840-358219' '(at1g79700 : 279.0) Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ARIA-interacting double AP2 domain protein (TAIR:AT1G16060.1); Has 7501 Blast hits to 5104 proteins in 263 species: Archae - 0; Bacteria - 38; Metazoa - 0; Fungi - 0; Plants - 7383; Viruses - 2; Other Eukaryotes - 78 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 209.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 83.4) no description available & (reliability: 558.0) & (original description: Putative At1g16060, Description = AP2-like ethylene-responsive transcription factor At1g16060, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03488_616901-620845' '(at1g51120 : 266.0) AP2/B3 transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: AP2/B3 transcription factor family protein (TAIR:AT1G50680.1); Has 3916 Blast hits to 3909 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3901; Viruses - 4; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|85971 : 90.1) no description available & (reliability: 532.0) & (original description: Putative BnaA05g15710D, Description = BnaA05g15710D protein, PFAM = PF00847;PF02362)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03510_674296-677429' '(at1g78080 : 156.0) Encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family (RAP2.4). The protein contains one AP2 domain. Role in mediating light and ethylene signaling.; related to AP2 4 (RAP2.4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G22190.1); Has 5853 Blast hits to 5721 proteins in 258 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 5806; Viruses - 11; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|47695 : 118.0) no description available & (reliability: 312.0) & (original description: Putative ERF060, Description = Ethylene-responsive transcription factor ERF060, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03548_212754-216543' '(at5g61890 : 117.0) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G07310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 113.0) no description available & (q6k7e6|erf1_orysa : 82.8) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 234.0) & (original description: Putative ERF113, Description = Ethylene-responsive transcription factor ERF113, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03580_125732-128325' '(at2g36450 : 135.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Ectopic overexpression of HRD increases the density of the root network and improves water and salt stress tolerance in Arabidopsis. Overexpression of HRD in rice causes an increase in plant biomass and drought resistance.; HARDY (HRD); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: C-repeat-binding factor 4 (TAIR:AT5G51990.1); Has 5681 Blast hits to 5646 proteins in 245 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 5670; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|47695 : 93.4) no description available & (reliability: 270.0) & (original description: Putative ERF024, Description = Ethylene-responsive transcription factor ERF024, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03772_25470-28222' '(at5g11590 : 117.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; TINY2 (TINY2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, embryo, hypocotyl, leaf; EXPRESSED DURING: LP.10 ten leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 106.0) no description available & (reliability: 234.0) & (original description: Putative BnaC09g28540D, Description = BnaC02g03940D protein, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03773_51948-54838' '(at3g61630 : 128.0) CRF6 encodes one of the six cytokinin response factors. CRF5 belongs to the AP2/ERF superfamily of the transcriptional factors. CRF proteins rapidly relocalize to the nucleus in response to cytokinin. Analysis of loos-of-function mutants revealed that the CRFs function redundantly to regulate the development of embryos, cotyledons and leaves.; cytokinin response factor 6 (CRF6); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 5 (TAIR:AT2G46310.1); Has 5693 Blast hits to 5625 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5682; Viruses - 2; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|47695 : 114.0) no description available & (q40477|erf4_tobac : 97.1) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NtERF3) - Nicotiana tabacum (Common tobacco) & (reliability: 256.0) & (original description: Putative BnaA09g39350D, Description = BnaA09g39350D protein, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03883_524637-530184' '(at2g28550 : 305.0) related to AP2.7 (RAP2.7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 (TAIR:AT5G60120.1). & (q8l3u3|bbm1_brana : 148.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 91.8) no description available & (reliability: 610.0) & (original description: Putative InAP2B, Description = APETALA2B, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf03985_100977-104053' '(at4g23750 : 154.0) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Monopteros target gene.; cytokinin response factor 2 (CRF2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 1 (TAIR:AT4G11140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47695 : 107.0) no description available & (q40477|erf4_tobac : 91.7) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NtERF3) - Nicotiana tabacum (Common tobacco) & (reliability: 308.0) & (original description: Putative CRF2, Description = Ethylene-responsive transcription factor CRF2, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf04217_702325-704927' '(at5g52020 : 124.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response to fungus; LOCATED IN: chloroplast; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G12630.1); Has 5783 Blast hits to 5605 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5767; Viruses - 2; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|47695 : 93.0) no description available & (reliability: 248.0) & (original description: Putative ERF14, Description = Ethylene response factor 14, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf04218_58211-65245' '(at1g79700 : 286.0) Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ARIA-interacting double AP2 domain protein (TAIR:AT1G16060.1); Has 7501 Blast hits to 5104 proteins in 263 species: Archae - 0; Bacteria - 38; Metazoa - 0; Fungi - 0; Plants - 7383; Viruses - 2; Other Eukaryotes - 78 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 236.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 83.4) no description available & (reliability: 572.0) & (original description: Putative At1g16060, Description = AP2-like ethylene-responsive transcription factor At1g16060, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf04218_58262-65164' '(at1g79700 : 284.0) Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ARIA-interacting double AP2 domain protein (TAIR:AT1G16060.1); Has 7501 Blast hits to 5104 proteins in 263 species: Archae - 0; Bacteria - 38; Metazoa - 0; Fungi - 0; Plants - 7383; Viruses - 2; Other Eukaryotes - 78 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 235.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (reliability: 568.0) & (original description: Putative ADAP, Description = AP2-like ethylene-responsive transcription factor, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf04337_200231-203121' '(at5g11590 : 135.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; TINY2 (TINY2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, embryo, hypocotyl, leaf; EXPRESSED DURING: LP.10 ten leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 104.0) no description available & (reliability: 270.0) & (original description: Putative DREB3, Description = Dehydration-responsive element-binding protein 3, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf04386_1-4790' '(at1g51190 : 558.0) Encodes a member of the AINTEGUMENTA-like (AIL) subclass of the AP2/EREBP family of transcription factors and is essential for quiescent center (QC) specification and stem cell activity. It is a key effector for establishment of the stem cell niche during embryonic pattern formation. It is transcribed in response to auxin accumulation and is dependent on auxin response transcription factors.; PLETHORA 2 (PLT2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G20840.1); Has 7787 Blast hits to 5250 proteins in 253 species: Archae - 0; Bacteria - 8; Metazoa - 4; Fungi - 0; Plants - 7694; Viruses - 2; Other Eukaryotes - 79 (source: NCBI BLink). & (q8lsn2|bbm2_brana : 353.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (gnl|cdd|47695 : 88.4) no description available & (reliability: 1088.0) & (original description: Putative PLT2, Description = AP2-like ethylene-responsive transcription factor PLT2, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf04574_725663-733050' '(at5g10510 : 419.0) Encodes an AP2-domain transcription factor involved in root stem cell identity and root development.; AINTEGUMENTA-like 6 (AIL6); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: AINTEGUMENTA-like 7 (TAIR:AT5G65510.1). & (q8l3u3|bbm1_brana : 314.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 92.2) no description available & (reliability: 838.0) & (original description: Putative AIL6, Description = AP2-like ethylene-responsive transcription factor AIL6, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf04826_193905-196435' '(at3g50260 : 139.0) Encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. Involved in defense and freezing stress responses. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; cooperatively regulated by ethylene and jasmonate 1 (CEJ1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: DREB and EAR motif protein 2 (TAIR:AT5G67190.1); Has 5544 Blast hits to 5466 proteins in 235 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5538; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|47695 : 98.8) no description available & (reliability: 272.0) & (original description: Putative DREB5A, Description = Dehydration responsive element binding transcription factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf05109_383416-392804' '(at1g16060 : 281.0) Encodes ADAP, an AP2-domain protein that interacts with ARIA. ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth.; ARIA-interacting double AP2 domain protein (ADAP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G79700.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 211.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 84.9) no description available & (reliability: 562.0) & (original description: Putative At1g16060, Description = AP2-like ethylene-responsive transcription factor At1g16060, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf05123_48817-54628' '(at1g72570 : 369.0) Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: AINTEGUMENTA-like 5 (TAIR:AT5G57390.1); Has 7692 Blast hits to 5276 proteins in 259 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 0; Plants - 7602; Viruses - 4; Other Eukaryotes - 74 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 323.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 94.2) no description available & (reliability: 738.0) & (original description: Putative AIL1, Description = AP2-like ethylene-responsive transcription factor AIL1, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf05135_628878-631393' '(at2g23340 : 139.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; DREB and EAR motif protein 3 (DEAR3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 10 (TAIR:AT4G36900.1); Has 5516 Blast hits to 5457 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5509; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|47695 : 95.3) no description available & (reliability: 278.0) & (original description: Putative ERF008, Description = Ethylene-responsive transcription factor ERF008, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf05357_4433-7410' '(at2g40220 : 113.0) Encodes a member of the DREB subfamily A-3 of ERF/AP2 transcription factor family (ABI4). The protein contains one AP2 domain. There is only one member in this family. Involved in abscisic acid (ABA) signal transduction, ABA-mediated glucose response, and hexokinase-dependent sugar responses. Acts downstream of GUN1 in retrograde signaling. Expressed most abundantly in developing siliques and to a lesser degree in seedlings.; ABA INSENSITIVE 4 (ABI4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G57600.1); Has 5833 Blast hits to 5755 proteins in 285 species: Archae - 0; Bacteria - 4; Metazoa - 56; Fungi - 8; Plants - 5653; Viruses - 6; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|47695 : 111.0) no description available & (reliability: 226.0) & (original description: Putative ABI4, Description = Ethylene-responsive transcription factor ABI4, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf05459_114950-117687' '(at1g12610 : 144.0) Encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (DDF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. Overexpression of this gene results in delayed flowering and dwarfism, reduction of gibberellic acid biosynthesis, and increased tolerance to high levels of salt. This gene is expressed in all tissues examined, but most abundantly expressed in upper stems. Overexpression of this gene is also correlated with increased expression of GA biosynthetic genes and RD29A (a cold and drought responsive gene). Under salt stress it induces the expression of GAOX7, which encodes ad C20-GA inhibitor.; DWARF AND DELAYED FLOWERING 1 (DDF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G63030.2); Has 5207 Blast hits to 5205 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5202; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|28902 : 97.3) no description available & (reliability: 288.0) & (original description: Putative CBFd, Description = CBF-like transcription factor d, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf05773_11140-36359' '(at1g74930 : 141.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; ORA47; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G19210.1); Has 5510 Blast hits to 5399 proteins in 239 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5503; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|47695 : 101.0) no description available & (reliability: 282.0) & (original description: Putative RAP2L13, Description = RAP2-like protein, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf05993_133979-136839' '(at3g57600 : 207.0) encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G18450.1); Has 5751 Blast hits to 5635 proteins in 247 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5730; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|47695 : 106.0) no description available & (reliability: 414.0) & (original description: Putative DREB2F, Description = Dehydration-responsive element-binding protein 2F, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06026_13893-17176' '(gnl|cdd|47695 : 101.0) no description available & (at5g19790 : 89.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family (RAP2.11). The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; related to AP2 11 (RAP2.11); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root hair, epidermis, primary root differentiation zone; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 4 (TAIR:AT4G27950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative WIN1L, Description = WIN1-like protein, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06059_87580-90764' '(at1g25560 : 365.0) Encodes a member of the RAV transcription factor family that contains AP2 and B3 binding domains. Involved in the regulation of flowering under long days. Loss of function results in early flowering. Overexpression causes late flowering and repression of expression of FT. Novel transcriptional regulator involved in ethylene signaling. Promoter bound by EIN3. EDF1 in turn, binds to promoter elements in ethylene responsive genes.; TEMPRANILLO 1 (TEM1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: photoperiodism, flowering, ethylene mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to ABI3/VP1 2 (TAIR:AT1G68840.2); Has 6413 Blast hits to 6197 proteins in 270 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 6380; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|85971 : 95.5) no description available & (reliability: 730.0) & (original description: Putative RAV, Description = RAV-like DNA-binding protein, PFAM = PF00847;PF02362)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06081_271566-274270' '(at4g25470 : 135.0) Encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF2). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature, abscisic acid, and circadian rhythm. Overexpressing this gene leads to increased freeze tolerance and induces the expression level of 85 cold-induced genes and reduces the expression level of 8 cold-repressed genes, which constitute the CBF2 regulon. Mutations in CBF2 increases the expression level of CBF1 and CBF3, suggesting that this gene may be involved in a negative regulatory or feedback circuit of the CBF pathway.; C-repeat/DRE binding factor 2 (CBF2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: C-repeat/DRE binding factor 1 (TAIR:AT4G25490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47695 : 94.9) no description available & (reliability: 270.0) & (original description: Putative DREB1F, Description = Dehydration-responsive element-binding protein 1F, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06117_100506-103717' '(at2g20880 : 172.0) Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT4G28140.1); Has 5938 Blast hits to 5739 proteins in 258 species: Archae - 0; Bacteria - 4; Metazoa - 6; Fungi - 2; Plants - 5899; Viruses - 2; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|47695 : 114.0) no description available & (q6k7e6|erf1_orysa : 85.1) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 344.0) & (original description: Putative ERF054, Description = Ethylene-responsive transcription factor ERF054, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06157_170245-173000' '(at5g11590 : 115.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; TINY2 (TINY2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, embryo, hypocotyl, leaf; EXPRESSED DURING: LP.10 ten leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 105.0) no description available & (reliability: 230.0) & (original description: Putative TINYL7, Description = TINY-like protein, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06200_124514-127182' '(q40477|erf4_tobac : 108.0) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NtERF3) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|47695 : 103.0) no description available & (at5g44210 : 100.0) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; erf domain protein 9 (ERF9); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ERF domain protein 10 (TAIR:AT1G03800.1); Has 6203 Blast hits to 5781 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6179; Viruses - 2; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative ERF3, Description = Ethylene response factor 3, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06407_194024-202313' '(q8lsn2|bbm2_brana : 393.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (at5g17430 : 377.0) Encodes an AP2-domain containing protein similar to ANT. Expressed in embryos and lateral root primordium.; BABY BOOM (BBM); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G51190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47695 : 93.4) no description available & (reliability: 754.0) & (original description: Putative BBM, Description = AP2-like ethylene-responsive transcription factor BBM, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06444_212633-215100' '(at5g67190 : 150.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; DREB and EAR motif protein 2 (DEAR2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cooperatively regulated by ethylene and jasmonate 1 (TAIR:AT3G50260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 98.8) no description available & (reliability: 300.0) & (original description: Putative CEJ1, Description = RAP2-like protein, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06621_380526-385028' '(at5g61890 : 122.0) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G07310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 106.0) no description available & (q6k7e6|erf1_orysa : 80.9) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 244.0) & (original description: Putative ap2, Description = Ethylene response factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06621_380553-385025' '(at5g61890 : 122.0) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G07310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 112.0) no description available & (q6k7e6|erf1_orysa : 82.0) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 244.0) & (original description: Putative ERF113, Description = Ethylene-responsive transcription factor ERF113, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06848_839547-842128' '(at1g71450 : 141.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G33760.1); Has 5936 Blast hits to 5716 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5928; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|47695 : 104.0) no description available & (q9lw49|erf4_nicsy : 81.6) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 282.0) & (original description: Putative DREB4B, Description = Dehydration responsive element binding transcription factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06848_952348-954887' '(at1g71450 : 136.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G33760.1); Has 5936 Blast hits to 5716 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5928; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|47695 : 103.0) no description available & (reliability: 272.0) & (original description: Putative ERF021, Description = Ethylene-responsive transcription factor ERF021, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06913_13599-18972' '(at3g16770 : 148.0) Encodes a member of the ERF (ethylene response factor) subfamily B-2 of the plant specific ERF/AP2 transcription factor family (RAP2.3). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.It is localized to the nucleus and acts as a transcriptional activator through the GCC-box. It has been identified as a suppressor of Bax-induced cell death by functional screening in yeast and can also suppress Bax-induced cell death in tobacco plants. Overexpression of this gene in tobacco BY-2 cells confers resistance to H2O2 and heat stresses. Overexpression in Arabidopsis causes upregulation of PDF1.2 and GST6. It is part of the ethylene signaling pathway and is predicted to act downstream of EIN2 and CTR1, but not under EIN3.; ethylene-responsive element binding protein (EBP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G47520.1); Has 5957 Blast hits to 5752 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5929; Viruses - 4; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|47695 : 114.0) no description available & (q6k7e6|erf1_orysa : 100.0) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 296.0) & (original description: Putative ap2, Description = AP2 domain-containing transcription factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06969_5510-8232' '(at5g11590 : 160.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; TINY2 (TINY2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, embryo, hypocotyl, leaf; EXPRESSED DURING: LP.10 ten leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 103.0) no description available & (reliability: 320.0) & (original description: Putative DREB3, Description = Dehydration-responsive element-binding protein 3, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf06984_298143-302093' '(gnl|cdd|47695 : 110.0) no description available & (at2g40220 : 103.0) Encodes a member of the DREB subfamily A-3 of ERF/AP2 transcription factor family (ABI4). The protein contains one AP2 domain. There is only one member in this family. Involved in abscisic acid (ABA) signal transduction, ABA-mediated glucose response, and hexokinase-dependent sugar responses. Acts downstream of GUN1 in retrograde signaling. Expressed most abundantly in developing siliques and to a lesser degree in seedlings.; ABA INSENSITIVE 4 (ABI4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G57600.1); Has 5833 Blast hits to 5755 proteins in 285 species: Archae - 0; Bacteria - 4; Metazoa - 56; Fungi - 8; Plants - 5653; Viruses - 6; Other Eukaryotes - 106 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative abi4, Description = Ethylene-responsive transcription factor ABI4, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf07226_825225-827872' '(at1g75490 : 149.0) encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G18450.1); Has 5736 Blast hits to 5602 proteins in 247 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5714; Viruses - 6; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|47695 : 96.9) no description available & (q6k7e6|erf1_orysa : 81.3) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 298.0) & (original description: Putative DREB2D, Description = Dehydration-responsive element-binding protein 2D, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf07579_180895-183929' '(at5g61890 : 125.0) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G07310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 111.0) no description available & (q6k7e6|erf1_orysa : 82.8) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 250.0) & (original description: Putative ERF113, Description = Ethylene-responsive transcription factor ERF113, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf07913_128929-133637' '(at5g25390 : 176.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; shine2 (SHN2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G11190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 113.0) no description available & (reliability: 352.0) & (original description: Putative AP2D35, Description = AP2 domain class transcription factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf08033_130051-132797' '(at1g75490 : 125.0) encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G18450.1); Has 5736 Blast hits to 5602 proteins in 247 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5714; Viruses - 6; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|47695 : 94.2) no description available & (reliability: 250.0) & (original description: Putative DREB5, Description = Putative DRE-binding protein 5, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf08060_129228-132899' '(at5g05410 : 123.0) Encodes a transcription factor that specifically binds to DRE/CRT cis elements (responsive to drought and low-temperature stress). Belongs to the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2A). There are eight members in this subfamily including DREB2B. The protein contains one AP2 domain. Overexpression of transcriptional activation domain of DREB2A resulted in significant drought stress tolerance but only slight freezing tolerance in transgenic Arabidopsis plants. Microarray and RNA gel blot analyses revealed that DREB2A regulates expression of many water stressñinducible genes.; DRE-binding protein 2A (DREB2A); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: DRE/CRT-binding protein 2B (TAIR:AT3G11020.1); Has 5407 Blast hits to 5383 proteins in 247 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5390; Viruses - 4; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|47695 : 103.0) no description available & (reliability: 246.0) & (original description: Putative DREB2C, Description = Dehydration-responsive element-binding protein 2C, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf08516_140098-158047' '(gnl|cdd|47695 : 102.0) no description available & (at1g80580 : 91.7) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G18560.1); Has 5731 Blast hits to 5495 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5710; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative NtERF#231, Description = Ethylene response factor #231, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf08651_443006-445518' '(gnl|cdd|47695 : 102.0) no description available & (at5g21960 : 96.3) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G19210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative EREBP2, Description = Ethylene-responsive element binding protein 2, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf08876_132392-138751' '(at1g16060 : 294.0) Encodes ADAP, an AP2-domain protein that interacts with ARIA. ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth.; ARIA-interacting double AP2 domain protein (ADAP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G79700.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 215.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 83.8) no description available & (reliability: 588.0) & (original description: Putative ADAP, Description = AP2-like ethylene-responsive transcription factor, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf09004_54967-57464' '(gnl|cdd|47695 : 92.6) no description available & (at4g11140 : 89.4) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Also named as CRF1 (cytokinin response factor 1).; cytokinin response factor 1 (CRF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 2 (TAIR:AT4G23750.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative CRF7, Description = CRF7, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf09087_68104-70820' '(at1g21910 : 109.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G77640.1); Has 6386 Blast hits to 5661 proteins in 267 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 9; Plants - 5687; Viruses - 2; Other Eukaryotes - 589 (source: NCBI BLink). & (gnl|cdd|47695 : 99.6) no description available & (reliability: 218.0) & (original description: Putative ERF012, Description = Ethylene-responsive transcription factor ERF012, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf09459_315799-319690' '(at4g13620 : 172.0) encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G22190.1); Has 5584 Blast hits to 5564 proteins in 239 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 5562; Viruses - 6; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|47695 : 113.0) no description available & (reliability: 344.0) & (original description: Putative ERF062, Description = Ethylene-responsive transcription factor ERF062, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf09704_261959-293616' '(gnl|cdd|47695 : 112.0) no description available & (q9lw49|erf4_nicsy : 98.2) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (at5g44210 : 96.3) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; erf domain protein 9 (ERF9); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ERF domain protein 10 (TAIR:AT1G03800.1); Has 6203 Blast hits to 5781 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6179; Viruses - 2; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative ERF3, Description = Ethylene response factor 3, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf10169_18650-21735' '(at5g05410 : 147.0) Encodes a transcription factor that specifically binds to DRE/CRT cis elements (responsive to drought and low-temperature stress). Belongs to the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2A). There are eight members in this subfamily including DREB2B. The protein contains one AP2 domain. Overexpression of transcriptional activation domain of DREB2A resulted in significant drought stress tolerance but only slight freezing tolerance in transgenic Arabidopsis plants. Microarray and RNA gel blot analyses revealed that DREB2A regulates expression of many water stressñinducible genes.; DRE-binding protein 2A (DREB2A); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: DRE/CRT-binding protein 2B (TAIR:AT3G11020.1); Has 5407 Blast hits to 5383 proteins in 247 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5390; Viruses - 4; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|47695 : 104.0) no description available & (reliability: 294.0) & (original description: Putative ap2, Description = AP2 domain containing protein, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf10767_286816-290262' '(at1g25560 : 368.0) Encodes a member of the RAV transcription factor family that contains AP2 and B3 binding domains. Involved in the regulation of flowering under long days. Loss of function results in early flowering. Overexpression causes late flowering and repression of expression of FT. Novel transcriptional regulator involved in ethylene signaling. Promoter bound by EIN3. EDF1 in turn, binds to promoter elements in ethylene responsive genes.; TEMPRANILLO 1 (TEM1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: photoperiodism, flowering, ethylene mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to ABI3/VP1 2 (TAIR:AT1G68840.2); Has 6413 Blast hits to 6197 proteins in 270 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 6380; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|85971 : 95.9) no description available & (reliability: 736.0) & (original description: Putative RAV1, Description = AP2/ERF and B3 domain-containing transcription factor RAV1, PFAM = PF02362;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf10785_203647-207151' '(gnl|cdd|47695 : 94.9) no description available & (at1g28160 : 93.2) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5516 Blast hits to 5465 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 5459; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative LEP, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf11138_192652-199041' '(at2g41710 : 362.0) Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G54320.1). & (q8l3u3|bbm1_brana : 139.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (reliability: 724.0) & (original description: Putative At2g41710, Description = AP2-like ethylene-responsive transcription factor At2g41710, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf11515_36200-44109' '(at5g10510 : 417.0) Encodes an AP2-domain transcription factor involved in root stem cell identity and root development.; AINTEGUMENTA-like 6 (AIL6); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: AINTEGUMENTA-like 7 (TAIR:AT5G65510.1). & (q8l3u3|bbm1_brana : 302.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 91.8) no description available & (reliability: 834.0) & (original description: Putative AIL6, Description = AP2-like ethylene-responsive transcription factor AIL6, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf11694_183866-186516' '(at1g19210 : 144.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, C globular stage, LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G74930.1); Has 5600 Blast hits to 5488 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5592; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|47695 : 103.0) no description available & (reliability: 288.0) & (original description: Putative ERF017, Description = Ethylene-responsive transcription factor ERF017, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf11706_108400-113605' '(gnl|cdd|47695 : 114.0) no description available & (at5g64750 : 97.1) Encodes a putative transcription factor containing an AP2 domain. Is a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. Expressed in response to ABA, osmotic stress, sugar stress and drought. Mutants are hypersensitive to these stresses. May be involved in regulation of ABA mediated stress response.; ABA REPRESSOR1 (ABR1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative ap2, Description = AP2 domain-containing transcription factor family protein, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf11756_101007-107164' '(at2g28550 : 332.0) related to AP2.7 (RAP2.7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 (TAIR:AT5G60120.1). & (q8l3u3|bbm1_brana : 145.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 89.5) no description available & (reliability: 664.0) & (original description: Putative ids1, Description = APETALA2-like protein, PFAM = PF00847;PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf12210_834945-837526' '(gnl|cdd|47695 : 116.0) no description available & (at5g50080 : 95.1) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; ethylene response factor 110 (ERF110); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G33710.1); Has 6196 Blast hits to 5849 proteins in 257 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6176; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative ap2, Description = Ethylene response factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf12609_248256-251370' '(at5g25390 : 179.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; shine2 (SHN2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G11190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 111.0) no description available & (reliability: 358.0) & (original description: Putative SHN3, Description = Ethylene-responsive transcription factor SHINE 3, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf12639_1-2354' '(at5g18560 : 153.0) Encodes PUCHI, a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. PUCHI is required for morphogenesis in the early lateral root primordium of Arabidopsis. Expressed in early floral meristem (stage 1 to 2). Required for early floral meristem growth and for bract suppression. Triple mutant with bop1 and bop2 displays a strong defect in the determination of floral meristem identity with reduced LFY expression and the lack of AP1 expression.; PUCHI; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G13910.1); Has 5489 Blast hits to 5364 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 5473; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|47695 : 99.6) no description available & (q9lw49|erf4_nicsy : 82.4) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 306.0) & (original description: Putative bd1, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf13779_18435-21127' '(gnl|cdd|47695 : 110.0) no description available & (at3g15210 : 99.8) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-4). The protein contains one AP2 domain. Acts as a negative regulator of JA-responsive defense gene expression and resistance to the necrotrophic fungal pathogen Fusarium oxysporum and antagonizes JA inhibition of root elongation.; ethylene responsive element binding factor 4 (ERF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 8 (TAIR:AT1G53170.1); Has 6170 Blast hits to 5786 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6156; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (q9lw49|erf4_nicsy : 97.4) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 182.6) & (original description: Putative ERF3, Description = Ethylene response factor 3, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf14233_43298-48141' '(at5g61890 : 111.0) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G07310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 106.0) no description available & (reliability: 222.0) & (original description: Putative ap2, Description = Ethylene response factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf14233_43695-140788' '(at5g61890 : 96.3) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G07310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47695 : 96.1) no description available & (reliability: 192.6) & (original description: Putative ap2, Description = Ethylene-responsive transcription factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf15963_148031-150474' '(at1g71520 : 140.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G22810.1); Has 4894 Blast hits to 4892 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4889; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|47695 : 84.5) no description available & (reliability: 280.0) & (original description: Putative ERF020, Description = Ethylene-responsive transcription factor ERF020, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf16007_34885-88916' '(at4g25490 : 212.0) Transcriptional activator that binds to the DRE/CRT regulatory element and induces COR (cold-regulated) gene expression increasing plant freezing tolerance. It encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature and abscisic acid.; C-repeat/DRE binding factor 1 (CBF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: C-repeat/DRE binding factor 2 (TAIR:AT4G25470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|28902 : 94.2) no description available & (reliability: 424.0) & (original description: Putative avrl, Description = Avirulence-like protein 1, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf16506_59184-62323' '(at5g52020 : 117.0) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response to fungus; LOCATED IN: chloroplast; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G12630.1); Has 5783 Blast hits to 5605 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5767; Viruses - 2; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|47695 : 95.3) no description available & (reliability: 234.0) & (original description: Putative ERF1, Description = Ethylene-responsive transcription factor 1, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf18347_44808-47683' '(at1g64380 : 167.0) encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.; Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 4 (TAIR:AT1G78080.1); Has 5953 Blast hits to 5757 proteins in 257 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 5926; Viruses - 6; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|47695 : 110.0) no description available & (reliability: 334.0) & (original description: Putative ERF061, Description = Ethylene-responsive transcription factor ERF061, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf19091_9322-60252' '(gnl|cdd|28902 : 95.7) no description available & (at1g24590 : 95.5) Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. This gene functions in the regeneration of shoots in tissue culture, probably through transcriptional regulation of CUC1. May also be involved in activation of the cell cycle via CycD1;1.; DORNROSCHEN-like (DRNL); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: embryo, leaf primordium, seed; EXPRESSED DURING: C globular stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G12980.1); Has 5552 Blast hits to 5472 proteins in 243 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5544; Viruses - 2; Other Eukaryotes - 6 (source: NCBI BLink). & (q9lw49|erf4_nicsy : 85.5) Ethylene-responsive transcription factor 4 (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) - Nicotiana sylvestris (Wood tobacco) & (reliability: 191.0) & (original description: Putative bd1, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf19733_4668-8784' '(at1g53910 : 181.0) encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.12). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.; related to AP2 12 (RAP2.12); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 2 (TAIR:AT3G14230.2); Has 6180 Blast hits to 5848 proteins in 262 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 6130; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (q6k7e6|erf1_orysa : 181.0) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (gnl|cdd|47695 : 110.0) no description available & (reliability: 362.0) & (original description: Putative erf1, Description = Ethylene transcription factor, PFAM = PF00847)' T '27.3.3' 'RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family' 'niben101scf31747_15518-18522' '(at1g68550 : 92.0) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G25890.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|28902 : 88.4) no description available & (reliability: 184.0) & (original description: Putative AP2D46, Description = AP2 domain transcription factor-like protein, PFAM = PF00847)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'nbv0.3scaffold6637_9525-17700' '(at1g19220 : 683.0) Encodes an auxin response factor that contains the conserved VP1-B3 DNA-binding domain at its N-terminus and the Aux/IAA-like domains III and IV present in most ARFs at its C-terminus. The protein interacts with IAA1 (yeast two hybrid) and other auxin response elements such as ER7 and ER9 (yeast one hybrid). ARF19 protein can complement many aspects of the arf7 mutant phenotype and , together with ARF7, is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin.; auxin response factor 19 (ARF19); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related (TAIR:AT5G20730.2); Has 61717 Blast hits to 31683 proteins in 1304 species: Archae - 12; Bacteria - 3231; Metazoa - 21055; Fungi - 6588; Plants - 6362; Viruses - 195; Other Eukaryotes - 24274 (source: NCBI BLink). & (gnl|cdd|69996 : 147.0) no description available & (gnl|cdd|38804 : 80.1) no description available & (reliability: 1366.0) & (original description: Putative arf6, Description = Auxin response factor, PFAM = PF02362;PF02309;PF06507)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'nbv0.3scaffold19145_19086-30246' '(at5g37020 : 884.0) Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF6 to control stamen elongation and flower maturation. Expression of ARF8 is controlled by miR167.; auxin response factor 8 (ARF8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to auxin stimulus, fruit development, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 6 (TAIR:AT1G30330.1); Has 6836 Blast hits to 4235 proteins in 292 species: Archae - 0; Bacteria - 185; Metazoa - 1851; Fungi - 437; Plants - 1949; Viruses - 22; Other Eukaryotes - 2392 (source: NCBI BLink). & (gnl|cdd|69996 : 137.0) no description available & (reliability: 1768.0) & (original description: Putative ARF8, Description = Auxin response factor 8, PFAM = PF02309;PF02362;PF06507)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'nbv0.3scaffold81468_257-6091' '(at4g23980 : 582.0) Encodes auxin response factor 9 (ARF9).; auxin response factor 9 (ARF9); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 11 (TAIR:AT2G46530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69996 : 94.6) no description available & (reliability: 1164.0) & (original description: Putative ARF9, Description = Auxin response factor 9, PFAM = PF02362;PF02309;PF02309;PF06507)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'nbv0.3scaffold176225_1-676' '(at5g62000 : 142.0) Encodes an auxin response factor. Mutants have many defects including enlarged rosette leaves, reduced fertility, later senescence, hypocotyl elongation defects, enlarged seeds and enlarged cotyledons. May not mediate auxin effects. Increase in seed size due to increased cell proliferation.; auxin response factor 2 (ARF2); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 1 (TAIR:AT1G59750.2). & (reliability: 284.0) & (original description: Putative arf2, Description = Auxin response factor, PFAM = )' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'nbv0.5scaffold2344_45794-51112' '(at2g28350 : 665.0) Involved in root cap cell differentiation.; auxin response factor 10 (ARF10); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, miRNA binding; INVOLVED IN: in 13 processes; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 16 (TAIR:AT4G30080.1); Has 1499 Blast hits to 1393 proteins in 79 species: Archae - 0; Bacteria - 4; Metazoa - 43; Fungi - 0; Plants - 1444; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|69996 : 125.0) no description available & (reliability: 1330.0) & (original description: Putative ARF18, Description = Auxin response factor 18, PFAM = PF06507;PF02362)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'nbv0.5scaffold8432_3688-10236' '(at5g62000 : 159.0) Encodes an auxin response factor. Mutants have many defects including enlarged rosette leaves, reduced fertility, later senescence, hypocotyl elongation defects, enlarged seeds and enlarged cotyledons. May not mediate auxin effects. Increase in seed size due to increased cell proliferation.; auxin response factor 2 (ARF2); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 1 (TAIR:AT1G59750.2). & (reliability: 318.0) & (original description: Putative arf1, Description = Auxin response factor, PFAM = )' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben044scf00001007ctg006_1667-4935' '(at5g37020 : 258.0) Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF6 to control stamen elongation and flower maturation. Expression of ARF8 is controlled by miR167.; auxin response factor 8 (ARF8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to auxin stimulus, fruit development, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 6 (TAIR:AT1G30330.1); Has 6836 Blast hits to 4235 proteins in 292 species: Archae - 0; Bacteria - 185; Metazoa - 1851; Fungi - 437; Plants - 1949; Viruses - 22; Other Eukaryotes - 2392 (source: NCBI BLink). & (reliability: 516.0) & (original description: Putative arf6, Description = Auxin response factor, PFAM = )' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben044scf00005482ctg014_11394-17420' '(at3g61830 : 648.0) auxin response factor 18 (ARF18); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to hormone stimulus, regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 11 (TAIR:AT2G46530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69996 : 120.0) no description available & (reliability: 1296.0) & (original description: Putative ARF18, Description = Auxin response factor 18, PFAM = PF02362;PF02309;PF02309;PF06507)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben044scf00010441ctg008_9278-20464' '(at1g77850 : 477.0) Posttranscriptionally regulated by miR160 and is essential for proper development.Regulates early auxin response genes.; auxin response factor 17 (ARF17); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: anatomical structure morphogenesis, auxin mediated signaling pathway, adventitious root development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 16 (TAIR:AT4G30080.1); Has 1238 Blast hits to 1221 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 1226; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|69996 : 94.2) no description available & (reliability: 954.0) & (original description: Putative ARF17, Description = Auxin response factor 17, PFAM = PF06507;PF02362)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben044scf00039121ctg012_1598-10268' '(at1g30330 : 747.0) Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF8 to control stamen elongation and flower maturation. Expression of ARF6 is controlled by miR167.; auxin response factor 6 (ARF6); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to auxin stimulus, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 8 (TAIR:AT5G37020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69996 : 134.0) no description available & (reliability: 1494.0) & (original description: Putative ARF25, Description = Auxin response factor 25, PFAM = PF02309;PF02362;PF06507)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben044scf00045280ctg000_1016-9275' '(at1g30330 : 745.0) Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF8 to control stamen elongation and flower maturation. Expression of ARF6 is controlled by miR167.; auxin response factor 6 (ARF6); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to auxin stimulus, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 8 (TAIR:AT5G37020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69996 : 138.0) no description available & (reliability: 1490.0) & (original description: Putative ARF6, Description = Auxin response factor 6, PFAM = PF06507;PF02362;PF02309)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben044scf00056599ctg003_489-3556' '(at1g77850 : 351.0) Posttranscriptionally regulated by miR160 and is essential for proper development.Regulates early auxin response genes.; auxin response factor 17 (ARF17); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: anatomical structure morphogenesis, auxin mediated signaling pathway, adventitious root development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 16 (TAIR:AT4G30080.1); Has 1238 Blast hits to 1221 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 1226; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|69996 : 90.0) no description available & (reliability: 702.0) & (original description: Putative ARF10, Description = Auxin response factor, PFAM = PF06507;PF02362)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf00132_283004-288838' '(at4g23980 : 679.0) Encodes auxin response factor 9 (ARF9).; auxin response factor 9 (ARF9); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 11 (TAIR:AT2G46530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69996 : 115.0) no description available & (reliability: 1358.0) & (original description: Putative ARF9, Description = Auxin response factor 9, PFAM = PF02362;PF06507;PF02309;PF02309)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf00866_111260-117397' '(at4g23980 : 648.0) Encodes auxin response factor 9 (ARF9).; auxin response factor 9 (ARF9); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 11 (TAIR:AT2G46530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69996 : 119.0) no description available & (reliability: 1296.0) & (original description: Putative ARF9, Description = Auxin response factor 9, PFAM = PF06507;PF02309;PF02362)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf00885_2040604-2049623' '(at1g30330 : 739.0) Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF8 to control stamen elongation and flower maturation. Expression of ARF6 is controlled by miR167.; auxin response factor 6 (ARF6); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to auxin stimulus, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 8 (TAIR:AT5G37020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69996 : 131.0) no description available & (reliability: 1478.0) & (original description: Putative ARF6, Description = Auxin response factor 6, PFAM = PF06507;PF02362;PF02309)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf00981_546403-555018' '(at1g19220 : 598.0) Encodes an auxin response factor that contains the conserved VP1-B3 DNA-binding domain at its N-terminus and the Aux/IAA-like domains III and IV present in most ARFs at its C-terminus. The protein interacts with IAA1 (yeast two hybrid) and other auxin response elements such as ER7 and ER9 (yeast one hybrid). ARF19 protein can complement many aspects of the arf7 mutant phenotype and , together with ARF7, is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin.; auxin response factor 19 (ARF19); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related (TAIR:AT5G20730.2); Has 61717 Blast hits to 31683 proteins in 1304 species: Archae - 12; Bacteria - 3231; Metazoa - 21055; Fungi - 6588; Plants - 6362; Viruses - 195; Other Eukaryotes - 24274 (source: NCBI BLink). & (gnl|cdd|69996 : 141.0) no description available & (reliability: 1196.0) & (original description: Putative ARF5, Description = Auxin response factor 5, PFAM = PF02309;PF02362;PF06507)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf01393_168924-171991' '(at1g77850 : 365.0) Posttranscriptionally regulated by miR160 and is essential for proper development.Regulates early auxin response genes.; auxin response factor 17 (ARF17); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: anatomical structure morphogenesis, auxin mediated signaling pathway, adventitious root development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 16 (TAIR:AT4G30080.1); Has 1238 Blast hits to 1221 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 1226; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|69996 : 91.1) no description available & (reliability: 730.0) & (original description: Putative PGSC0003DMG400027798, Description = Auxin response factor, PFAM = PF06507;PF02362)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf01677_219223-232287' '(at5g37020 : 733.0) Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF6 to control stamen elongation and flower maturation. Expression of ARF8 is controlled by miR167.; auxin response factor 8 (ARF8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to auxin stimulus, fruit development, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 6 (TAIR:AT1G30330.1); Has 6836 Blast hits to 4235 proteins in 292 species: Archae - 0; Bacteria - 185; Metazoa - 1851; Fungi - 437; Plants - 1949; Viruses - 22; Other Eukaryotes - 2392 (source: NCBI BLink). & (gnl|cdd|69996 : 136.0) no description available & (reliability: 1466.0) & (original description: Putative arf8, Description = Auxin response factor, PFAM = PF06507;PF02309;PF02362)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf02131_49481-54096' '(at4g30080 : 641.0) Involved in root cap cell differentiation. Gene expression is regulated by mir160.Located in the nucleus.; auxin response factor 16 (ARF16); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 10 (TAIR:AT2G28350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69996 : 120.0) no description available & (reliability: 1282.0) & (original description: Putative ARF18, Description = Auxin response factor 18, PFAM = PF02362;PF06507)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf02428_188995-200801' '(at1g30330 : 752.0) Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF8 to control stamen elongation and flower maturation. Expression of ARF6 is controlled by miR167.; auxin response factor 6 (ARF6); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to auxin stimulus, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 8 (TAIR:AT5G37020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69996 : 138.0) no description available & (reliability: 1504.0) & (original description: Putative ARF6, Description = Auxin response factor 6, PFAM = PF06507;PF02309;PF02362)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf02530_935417-946080' '(at1g19220 : 588.0) Encodes an auxin response factor that contains the conserved VP1-B3 DNA-binding domain at its N-terminus and the Aux/IAA-like domains III and IV present in most ARFs at its C-terminus. The protein interacts with IAA1 (yeast two hybrid) and other auxin response elements such as ER7 and ER9 (yeast one hybrid). ARF19 protein can complement many aspects of the arf7 mutant phenotype and , together with ARF7, is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin.; auxin response factor 19 (ARF19); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related (TAIR:AT5G20730.2); Has 61717 Blast hits to 31683 proteins in 1304 species: Archae - 12; Bacteria - 3231; Metazoa - 21055; Fungi - 6588; Plants - 6362; Viruses - 195; Other Eukaryotes - 24274 (source: NCBI BLink). & (gnl|cdd|69996 : 140.0) no description available & (reliability: 1176.0) & (original description: Putative ARF2, Description = Auxin response factor, PFAM = PF02309;PF02362;PF06507)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf02669_66278-70882' '(at4g30080 : 713.0) Involved in root cap cell differentiation. Gene expression is regulated by mir160.Located in the nucleus.; auxin response factor 16 (ARF16); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 10 (TAIR:AT2G28350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69996 : 124.0) no description available & (reliability: 1426.0) & (original description: Putative ARF18, Description = Auxin response factor 18, PFAM = PF02362;PF06507)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf03169_661335-668666' '(at2g33860 : 525.0) ettin (ett) mutations have pleiotropic effects on Arabidopsis flower development, causing increases in perianth organ number, decreases in stamen number and anther formation, and apical-basal patterning defects in the gynoecium. The ETTIN gene encodes a protein with homology to DNA binding proteins which bind to auxin response elements. ETT transcript is expressed throughout stage 1 floral meristems and subsequently resolves to a complex pattern within petal, stamen and carpel primordia. ETT probably functions to impart regional identity in floral meristems that affects perianth organ number spacing, stamen formation, and regional differentiation in stamens and the gynoecium. During stage 5, ETT expression appears in a ring at the top of the floral meristem before morphological appearance of the gynoecium, consistent with the proposal that ETT is involved in prepatterning apical and basal boundaries in the gynoecium primordium. It is a target of the ta-siRNA tasiR-ARF.; ETTIN (ETT); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, vegetative phase change, regulation of transcription, DNA-dependent, abaxial cell fate specification, auxin metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 4 (TAIR:AT5G60450.1); Has 1211 Blast hits to 1200 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 1202; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|69996 : 116.0) no description available & (reliability: 1050.0) & (original description: Putative ARF3, Description = Auxin response factor 3, PFAM = PF06507;PF02362)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf03540_66045-74827' '(at1g19220 : 596.0) Encodes an auxin response factor that contains the conserved VP1-B3 DNA-binding domain at its N-terminus and the Aux/IAA-like domains III and IV present in most ARFs at its C-terminus. The protein interacts with IAA1 (yeast two hybrid) and other auxin response elements such as ER7 and ER9 (yeast one hybrid). ARF19 protein can complement many aspects of the arf7 mutant phenotype and , together with ARF7, is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin.; auxin response factor 19 (ARF19); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related (TAIR:AT5G20730.2); Has 61717 Blast hits to 31683 proteins in 1304 species: Archae - 12; Bacteria - 3231; Metazoa - 21055; Fungi - 6588; Plants - 6362; Viruses - 195; Other Eukaryotes - 24274 (source: NCBI BLink). & (gnl|cdd|69996 : 142.0) no description available & (reliability: 1192.0) & (original description: Putative ARF2, Description = Auxin response factor, PFAM = PF02362;PF06507;PF02309)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf04119_193750-201334' '(at1g59750 : 809.0) Encodes a member of the auxin response factor family. ARFs bind to the cis element 5'-TGTCTC-3' ARFs mediate changes in gene expression in response to auxin. ARF's form heterodimers with IAA/AUX genes. ARF1 enhances mutant phenotypes of ARF2 and may act with ARF2 to control aspects of maturation and senescence.ARF1:LUC and 3xHA:ARF1 proteins have a half-life of ~3-4 hours and their degradation is reduced by proteasome inhibitors. 3xHA:ARF1 degradation is not affected by a pre-treatment with IAA. A nuclear-targeted fusion protein containing the middle region of ARF1 linked to LUC:NLS has a similar half-life to the full-length ARF1:LUC construct. The degradation of 3xHA:ARF1 is not affected in an axr6-3 mutant grown at room temperature, although the degradation of AXR2/IAA7 is slowed under these conditions.; auxin response factor 1 (ARF1); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 11 (TAIR:AT2G46530.3). & (gnl|cdd|69996 : 126.0) no description available & (reliability: 1618.0) & (original description: Putative ARF1, Description = Auxin response factor 1, PFAM = PF06507;PF02309;PF02362)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf04907_110517-114738' '(at1g59750 : 233.0) Encodes a member of the auxin response factor family. ARFs bind to the cis element 5'-TGTCTC-3' ARFs mediate changes in gene expression in response to auxin. ARF's form heterodimers with IAA/AUX genes. ARF1 enhances mutant phenotypes of ARF2 and may act with ARF2 to control aspects of maturation and senescence.ARF1:LUC and 3xHA:ARF1 proteins have a half-life of ~3-4 hours and their degradation is reduced by proteasome inhibitors. 3xHA:ARF1 degradation is not affected by a pre-treatment with IAA. A nuclear-targeted fusion protein containing the middle region of ARF1 linked to LUC:NLS has a similar half-life to the full-length ARF1:LUC construct. The degradation of 3xHA:ARF1 is not affected in an axr6-3 mutant grown at room temperature, although the degradation of AXR2/IAA7 is slowed under these conditions.; auxin response factor 1 (ARF1); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 11 (TAIR:AT2G46530.3). & (reliability: 466.0) & (original description: Putative arf1, Description = Auxin response factor, PFAM = PF02362;PF06507)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf05444_417251-421847' '(at4g30080 : 754.0) Involved in root cap cell differentiation. Gene expression is regulated by mir160.Located in the nucleus.; auxin response factor 16 (ARF16); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 10 (TAIR:AT2G28350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69996 : 123.0) no description available & (reliability: 1508.0) & (original description: Putative ARF16, Description = Auxin response factor 16, PFAM = PF06507;PF02362)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf05633_53435-64632' '(at1g77850 : 468.0) Posttranscriptionally regulated by miR160 and is essential for proper development.Regulates early auxin response genes.; auxin response factor 17 (ARF17); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: anatomical structure morphogenesis, auxin mediated signaling pathway, adventitious root development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 16 (TAIR:AT4G30080.1); Has 1238 Blast hits to 1221 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 1226; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|69996 : 92.7) no description available & (reliability: 936.0) & (original description: Putative ARF17, Description = Auxin response factor 17, PFAM = PF06507;PF02362)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf06123_785161-789951' '(at4g30080 : 697.0) Involved in root cap cell differentiation. Gene expression is regulated by mir160.Located in the nucleus.; auxin response factor 16 (ARF16); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 10 (TAIR:AT2G28350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69996 : 118.0) no description available & (reliability: 1394.0) & (original description: Putative ARF18, Description = Auxin response factor 18, PFAM = PF06507;PF02362)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf06504_233501-240403' '(at4g23980 : 650.0) Encodes auxin response factor 9 (ARF9).; auxin response factor 9 (ARF9); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 11 (TAIR:AT2G46530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69996 : 116.0) no description available & (reliability: 1300.0) & (original description: Putative ARF9, Description = Auxin response factor 9, PFAM = PF02362;PF06507;PF02309)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf06621_215893-222436' '(at5g62000 : 935.0) Encodes an auxin response factor. Mutants have many defects including enlarged rosette leaves, reduced fertility, later senescence, hypocotyl elongation defects, enlarged seeds and enlarged cotyledons. May not mediate auxin effects. Increase in seed size due to increased cell proliferation.; auxin response factor 2 (ARF2); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 1 (TAIR:AT1G59750.2). & (gnl|cdd|69996 : 141.0) no description available & (reliability: 1870.0) & (original description: Putative ARF2, Description = Auxin response factor 2, PFAM = PF02362;PF02309;PF06507)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf07027_73038-86617' '(at5g37020 : 952.0) Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF6 to control stamen elongation and flower maturation. Expression of ARF8 is controlled by miR167.; auxin response factor 8 (ARF8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to auxin stimulus, fruit development, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 6 (TAIR:AT1G30330.1); Has 6836 Blast hits to 4235 proteins in 292 species: Archae - 0; Bacteria - 185; Metazoa - 1851; Fungi - 437; Plants - 1949; Viruses - 22; Other Eukaryotes - 2392 (source: NCBI BLink). & (gnl|cdd|69996 : 140.0) no description available & (reliability: 1904.0) & (original description: Putative ARF8, Description = Auxin response factor 8, PFAM = PF06507;PF02362)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf07465_191657-198972' '(at1g19850 : 967.0) Encodes a transcription factor (IAA24) mediating embryo axis formation and vascular development. Similar to AUXIN RESPONSIVE FACTOR 1 (ARF1) shown to bind to auxin responsive elements (AREs), and to the maize transcriptional activator VIVIPAROUS 1( VP1). In situ hybridization shows expression in provascular tissue of embryos, the emerging shoot primordia, then is restricted to provascular tissue, and in the root central vascular cylinder.; MONOPTEROS (MP); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, promoter binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 19 (TAIR:AT1G19220.1); Has 2568 Blast hits to 2208 proteins in 92 species: Archae - 0; Bacteria - 11; Metazoa - 4; Fungi - 3; Plants - 2536; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|69996 : 141.0) no description available & (reliability: 1934.0) & (original description: Putative ARF5, Description = Auxin response factor 5, PFAM = PF06507;PF02309;PF02362)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf07851_429587-435861' '(at2g28350 : 669.0) Involved in root cap cell differentiation.; auxin response factor 10 (ARF10); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, miRNA binding; INVOLVED IN: in 13 processes; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 16 (TAIR:AT4G30080.1); Has 1499 Blast hits to 1393 proteins in 79 species: Archae - 0; Bacteria - 4; Metazoa - 43; Fungi - 0; Plants - 1444; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|69996 : 126.0) no description available & (reliability: 1338.0) & (original description: Putative ARF18, Description = Auxin response factor 18, PFAM = PF02362;PF06507)' T '27.3.4' 'RNA.regulation of transcription.ARF, Auxin Response Factor family' 'niben101scf13690_202015-210340' '(at5g60450 : 838.0) Encodes a member of the ARF family of transcription factors which mediate auxin responses. ARF4 appears to have redundant function with ETT(ARF3) in specifying abaxial cell identity.; auxin response factor 4 (ARF4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: vegetative phase change, regulation of transcription, DNA-dependent, abaxial cell fate specification; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related (TAIR:AT2G33860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|69996 : 125.0) no description available & (reliability: 1676.0) & (original description: Putative ARF4, Description = Auxin response factor 4, PFAM = PF02309;PF02362;PF06507)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'nbv0.3scaffold2835_4418-9108' '(at1g59940 : 187.0) Type A response regulator highly similar to bacterial two-component response regulators. Rapidly induced by cytokinin. Involved in red-light signaling. Acts redundantly with ARR3 in the control of circadian period in a cytokinin-independent manner.; response regulator 3 (ARR3); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 4 (TAIR:AT1G10470.1); Has 60077 Blast hits to 59393 proteins in 2784 species: Archae - 301; Bacteria - 52871; Metazoa - 21; Fungi - 539; Plants - 1521; Viruses - 7; Other Eukaryotes - 4817 (source: NCBI BLink). & (gnl|cdd|29071 : 89.1) no description available & (reliability: 374.0) & (original description: Putative RRA4, Description = Type A response regulator RRA4, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'nbv0.3scaffold8069_47993-54305' '(at3g16857 : 105.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 1 (RR1); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: response regulator 2 (TAIR:AT4G16110.1); Has 98862 Blast hits to 97820 proteins in 3027 species: Archae - 653; Bacteria - 87858; Metazoa - 53; Fungi - 404; Plants - 2787; Viruses - 5; Other Eukaryotes - 7102 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative PGSC0003DMG400004864, Description = Putative ovule protein, PFAM = PF00249;PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'nbv0.3scaffold35734_9141-13861' '(at3g56380 : 174.0) response regulator 17; response regulator 17 (RR17); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 16 (TAIR:AT2G40670.1); Has 39813 Blast hits to 39289 proteins in 2430 species: Archae - 260; Bacteria - 34490; Metazoa - 15; Fungi - 615; Plants - 1410; Viruses - 6; Other Eukaryotes - 3017 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative ARR17, Description = Two-component response regulator ARR17, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'nbv0.3scaffold56897_9565-12849' '(at3g57040 : 230.0) response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2; response regulator 9 (ARR9); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 3 (TAIR:AT2G41310.1); Has 31916 Blast hits to 31617 proteins in 2439 species: Archae - 203; Bacteria - 27463; Metazoa - 9; Fungi - 302; Plants - 1334; Viruses - 4; Other Eukaryotes - 2601 (source: NCBI BLink). & (gnl|cdd|29071 : 88.8) no description available & (reliability: 460.0) & (original description: Putative ARR9, Description = Two-component response regulator ARR9, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'nbv0.3scaffold81840_76-6572' '(at4g16110 : 475.0) Encodes a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis. Acts in concert with other type-B ARRs in the cytokinin signaling pathway. AHK3 mediates cytokinin-induced phosphorylation of ARR2 on the Asp-80 residue. This phosphorylation plays a positive role of ARR2 in cytokinin-mediated control of leaf longevity.; response regulator 2 (RR2); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 1 (TAIR:AT3G16857.2); Has 95443 Blast hits to 94483 proteins in 2985 species: Archae - 623; Bacteria - 84652; Metazoa - 47; Fungi - 382; Plants - 2721; Viruses - 2; Other Eukaryotes - 7016 (source: NCBI BLink). & (gnl|cdd|47754 : 105.0) no description available & (q689g8|prr37_orysa : 91.7) Two-component response regulator-like PRR37 (Pseudo-response regulator 37) (OsPRR37) - Oryza sativa (Rice) & (reliability: 950.0) & (original description: Putative rr13, Description = Putative B-type response regulator 13, PFAM = PF00072;PF00249)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'nbv0.3scaffold89373_1-4311' '(at1g67710 : 348.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 11 (ARR11); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 1 (TAIR:AT3G16857.1); Has 111784 Blast hits to 110359 proteins in 3115 species: Archae - 722; Bacteria - 99003; Metazoa - 40; Fungi - 775; Plants - 2897; Viruses - 3; Other Eukaryotes - 8344 (source: NCBI BLink). & (gnl|cdd|32386 : 110.0) no description available & (q689g9|prr1_orysa : 86.7) Two-component response regulator-like PRR1 (Pseudo-response regulator 1) (OsPRR1) - Oryza sativa (Rice) & (reliability: 696.0) & (original description: Putative rr21, Description = Putative B-type response regulator 21, PFAM = PF00072;PF00249)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'nbv0.5scaffold184_927992-931627' '(at3g57040 : 211.0) response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2; response regulator 9 (ARR9); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 3 (TAIR:AT2G41310.1); Has 31916 Blast hits to 31617 proteins in 2439 species: Archae - 203; Bacteria - 27463; Metazoa - 9; Fungi - 302; Plants - 1334; Viruses - 4; Other Eukaryotes - 2601 (source: NCBI BLink). & (gnl|cdd|29071 : 86.1) no description available & (reliability: 422.0) & (original description: Putative dkRR2, Description = Two-component response regulator ARR3-like protein, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'nbv0.5scaffold380_367986-426836' '(at1g59940 : 155.0) Type A response regulator highly similar to bacterial two-component response regulators. Rapidly induced by cytokinin. Involved in red-light signaling. Acts redundantly with ARR3 in the control of circadian period in a cytokinin-independent manner.; response regulator 3 (ARR3); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 4 (TAIR:AT1G10470.1); Has 60077 Blast hits to 59393 proteins in 2784 species: Archae - 301; Bacteria - 52871; Metazoa - 21; Fungi - 539; Plants - 1521; Viruses - 7; Other Eukaryotes - 4817 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative dkRR2, Description = Two-component response regulator ARR3-like protein, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'nbv0.5scaffold1234_325799-395814' '(at5g62920 : 189.0) Encodes a Type-A response regulator that is responsive to cytokinin treatment. Its C-ter domain is very short in comparison to other Arabidopsis ARRs (17 total). Arr6 protein is stabilized by cytokinin.; response regulator 6 (ARR6); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 5 (TAIR:AT3G48100.1); Has 47436 Blast hits to 46969 proteins in 2667 species: Archae - 260; Bacteria - 41739; Metazoa - 17; Fungi - 503; Plants - 1416; Viruses - 4; Other Eukaryotes - 3497 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative ARR6, Description = Two-component response regulator ARR6, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'nbv0.5scaffold5774_73258-76150' '(at3g57040 : 223.0) response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2; response regulator 9 (ARR9); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 3 (TAIR:AT2G41310.1); Has 31916 Blast hits to 31617 proteins in 2439 species: Archae - 203; Bacteria - 27463; Metazoa - 9; Fungi - 302; Plants - 1334; Viruses - 4; Other Eukaryotes - 2601 (source: NCBI BLink). & (gnl|cdd|29071 : 89.1) no description available & (reliability: 446.0) & (original description: Putative ARR9, Description = Two-component response regulator ARR9, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'nbv0.5scaffold13277_1-2255' '(at3g56380 : 149.0) response regulator 17; response regulator 17 (RR17); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 16 (TAIR:AT2G40670.1); Has 39813 Blast hits to 39289 proteins in 2430 species: Archae - 260; Bacteria - 34490; Metazoa - 15; Fungi - 615; Plants - 1410; Viruses - 6; Other Eukaryotes - 3017 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative dkRR4, Description = Type-A response regulator, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben044scf00000925ctg004_5854-12837' '(at3g16857 : 450.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 1 (RR1); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: response regulator 2 (TAIR:AT4G16110.1); Has 98862 Blast hits to 97820 proteins in 3027 species: Archae - 653; Bacteria - 87858; Metazoa - 53; Fungi - 404; Plants - 2787; Viruses - 5; Other Eukaryotes - 7102 (source: NCBI BLink). & (gnl|cdd|32386 : 103.0) no description available & (q689g8|prr37_orysa : 93.2) Two-component response regulator-like PRR37 (Pseudo-response regulator 37) (OsPRR37) - Oryza sativa (Rice) & (reliability: 900.0) & (original description: Putative RRB2, Description = Type B response regulator RRB2, PFAM = PF00072;PF00249)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben044scf00003732ctg000_1-3174' '(at3g57040 : 226.0) response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2; response regulator 9 (ARR9); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 3 (TAIR:AT2G41310.1); Has 31916 Blast hits to 31617 proteins in 2439 species: Archae - 203; Bacteria - 27463; Metazoa - 9; Fungi - 302; Plants - 1334; Viruses - 4; Other Eukaryotes - 2601 (source: NCBI BLink). & (gnl|cdd|29071 : 82.2) no description available & (reliability: 452.0) & (original description: Putative ARR9, Description = Two-component response regulator ARR9, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben044scf00007440ctg014_4956-9592' '(at1g59940 : 201.0) Type A response regulator highly similar to bacterial two-component response regulators. Rapidly induced by cytokinin. Involved in red-light signaling. Acts redundantly with ARR3 in the control of circadian period in a cytokinin-independent manner.; response regulator 3 (ARR3); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 4 (TAIR:AT1G10470.1); Has 60077 Blast hits to 59393 proteins in 2784 species: Archae - 301; Bacteria - 52871; Metazoa - 21; Fungi - 539; Plants - 1521; Viruses - 7; Other Eukaryotes - 4817 (source: NCBI BLink). & (gnl|cdd|29071 : 84.9) no description available & (reliability: 402.0) & (original description: Putative ARR17, Description = Two-component response regulator ARR17, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben044scf00011325ctg000_543-5302' '(at3g56380 : 189.0) response regulator 17; response regulator 17 (RR17); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 16 (TAIR:AT2G40670.1); Has 39813 Blast hits to 39289 proteins in 2430 species: Archae - 260; Bacteria - 34490; Metazoa - 15; Fungi - 615; Plants - 1410; Viruses - 6; Other Eukaryotes - 3017 (source: NCBI BLink). & (gnl|cdd|29071 : 81.8) no description available & (reliability: 378.0) & (original description: Putative ARR17, Description = Two-component response regulator ARR17, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben044scf00026779ctg001_1-1346' '(at4g16110 : 112.0) Encodes a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis. Acts in concert with other type-B ARRs in the cytokinin signaling pathway. AHK3 mediates cytokinin-induced phosphorylation of ARR2 on the Asp-80 residue. This phosphorylation plays a positive role of ARR2 in cytokinin-mediated control of leaf longevity.; response regulator 2 (RR2); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 1 (TAIR:AT3G16857.2); Has 95443 Blast hits to 94483 proteins in 2985 species: Archae - 623; Bacteria - 84652; Metazoa - 47; Fungi - 382; Plants - 2721; Viruses - 2; Other Eukaryotes - 7016 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative PGSC0003DMG400013776, Description = Two-component system sensor histidine kinase/response regulator, putative, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben044scf00060737ctg000_23267-26446' '(at5g62920 : 190.0) Encodes a Type-A response regulator that is responsive to cytokinin treatment. Its C-ter domain is very short in comparison to other Arabidopsis ARRs (17 total). Arr6 protein is stabilized by cytokinin.; response regulator 6 (ARR6); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 5 (TAIR:AT3G48100.1); Has 47436 Blast hits to 46969 proteins in 2667 species: Archae - 260; Bacteria - 41739; Metazoa - 17; Fungi - 503; Plants - 1416; Viruses - 4; Other Eukaryotes - 3497 (source: NCBI BLink). & (reliability: 380.0) & (original description: Putative RRA6, Description = Type A response regulator RRA6, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben044scf00060927ctg001_165-5035' '(at2g25180 : 161.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 12 (RR12); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 10 (TAIR:AT4G31920.1); Has 111867 Blast hits to 110627 proteins in 3082 species: Archae - 684; Bacteria - 99498; Metazoa - 49; Fungi - 566; Plants - 2899; Viruses - 3; Other Eukaryotes - 8168 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative BnaC03g39750D, Description = BnaC03g39750D protein, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf00151_894130-896769' '(at3g04280 : 99.4) Encodes an atypical subtype of the ARR (Arabidopsis response regulator) protein family. ARR22 is more similar to the receiver domains of hybrid kinases than other response regulators. It acts as a phosphohistidine phosphatase when tested with phospho-AHP5 in vitro suggesting that it might be involved in a two-component phosphorelay. Expression of ARR22 transcripts appears to be localized to the chalaza and to be induced by wounding. Ectopic expression of ARR in other parts of the plant leads to reduced cytokinin-related responses and impaired root, shoot, and flower development. Overexpression of wild-type ARR22 in an arr22 mutant background causes variable defects in plant growth and fertility. But, in the same ar22 background, over-expression of versions of ARR22 that should act as dominant-negative or constitutively active proteins, based on mutations to the conserved Asp residue, do not show any phenotypic abnormalities, raising the possibility that these may not act as canonical response regulators.; response regulator 22 (RR22); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 24 (TAIR:AT5G26594.1); Has 38453 Blast hits to 37735 proteins in 2650 species: Archae - 260; Bacteria - 34151; Metazoa - 17; Fungi - 1133; Plants - 527; Viruses - 9; Other Eukaryotes - 2356 (source: NCBI BLink). & (reliability: 198.8) & (original description: Putative RR24, Description = Response regulator 24, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf00271_676835-679560' '(at5g26594 : 98.6) Encodes an atypical subtype of the ARR (Arabidopsis response regulator) protein family . It appears to be expressed in floral buds, mature flowers, and pollen. But, unlike the related ARR22 protein, it does not appear to be expressed at the seed:funiculus junction.; response regulator 24 (RR24); FUNCTIONS IN: two-component response regulator activity; INVOLVED IN: regulation of transcription, DNA-dependent, two-component signal transduction system (phosphorelay); LOCATED IN: cellular_component unknown; EXPRESSED IN: fruit, male gametophyte, flower, floral bud; CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 22 (TAIR:AT3G04280.3); Has 46165 Blast hits to 45373 proteins in 2720 species: Archae - 261; Bacteria - 41094; Metazoa - 16; Fungi - 1330; Plants - 631; Viruses - 10; Other Eukaryotes - 2823 (source: NCBI BLink). & (gnl|cdd|35739 : 84.3) no description available & (reliability: 194.8) & (original description: Putative BnaA05g33120D, Description = BnaA05g33120D protein, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf00691_149526-155693' '(at2g25180 : 362.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 12 (RR12); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 10 (TAIR:AT4G31920.1); Has 111867 Blast hits to 110627 proteins in 3082 species: Archae - 684; Bacteria - 99498; Metazoa - 49; Fungi - 566; Plants - 2899; Viruses - 3; Other Eukaryotes - 8168 (source: NCBI BLink). & (gnl|cdd|47754 : 106.0) no description available & (q689g6|prr95_orysa : 90.9) Two-component response regulator-like PRR95 (Pseudo-response regulator 95) (OsPRR95) - Oryza sativa (Rice) & (reliability: 724.0) & (original description: Putative rr19, Description = Putative B-type response regulator 19, PFAM = PF00249;PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf00825_9768-12541' '(at3g57040 : 190.0) response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2; response regulator 9 (ARR9); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 3 (TAIR:AT2G41310.1); Has 31916 Blast hits to 31617 proteins in 2439 species: Archae - 203; Bacteria - 27463; Metazoa - 9; Fungi - 302; Plants - 1334; Viruses - 4; Other Eukaryotes - 2601 (source: NCBI BLink). & (gnl|cdd|29071 : 86.1) no description available & (reliability: 380.0) & (original description: Putative RR3, Description = Type-A response regulator, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf00980_375792-378708' '(at3g57040 : 226.0) response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2; response regulator 9 (ARR9); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 3 (TAIR:AT2G41310.1); Has 31916 Blast hits to 31617 proteins in 2439 species: Archae - 203; Bacteria - 27463; Metazoa - 9; Fungi - 302; Plants - 1334; Viruses - 4; Other Eukaryotes - 2601 (source: NCBI BLink). & (gnl|cdd|29071 : 86.4) no description available & (reliability: 452.0) & (original description: Putative ARR9, Description = Two-component response regulator ARR9, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf01243_233951-239063' '(at1g10470 : 207.0) Encodes a two-component response regulator. Acts redundantly with ARR3 in the control of circadian period in a cytokinin-independent manner.; response regulator 4 (ARR4); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 3 (TAIR:AT1G59940.1); Has 56806 Blast hits to 56102 proteins in 2778 species: Archae - 292; Bacteria - 49762; Metazoa - 41; Fungi - 583; Plants - 1526; Viruses - 7; Other Eukaryotes - 4595 (source: NCBI BLink). & (gnl|cdd|29071 : 91.1) no description available & (reliability: 414.0) & (original description: Putative dkRR2, Description = Two-component response regulator ARR3-like protein, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf01511_61580-68331' '(at2g25180 : 353.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 12 (RR12); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 10 (TAIR:AT4G31920.1); Has 111867 Blast hits to 110627 proteins in 3082 species: Archae - 684; Bacteria - 99498; Metazoa - 49; Fungi - 566; Plants - 2899; Viruses - 3; Other Eukaryotes - 8168 (source: NCBI BLink). & (gnl|cdd|47754 : 106.0) no description available & (q689g6|prr95_orysa : 90.1) Two-component response regulator-like PRR95 (Pseudo-response regulator 95) (OsPRR95) - Oryza sativa (Rice) & (reliability: 706.0) & (original description: Putative rr19, Description = Putative B-type response regulator 19, PFAM = PF00072;PF00249)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf01577_196471-201161' '(at1g59940 : 204.0) Type A response regulator highly similar to bacterial two-component response regulators. Rapidly induced by cytokinin. Involved in red-light signaling. Acts redundantly with ARR3 in the control of circadian period in a cytokinin-independent manner.; response regulator 3 (ARR3); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 4 (TAIR:AT1G10470.1); Has 60077 Blast hits to 59393 proteins in 2784 species: Archae - 301; Bacteria - 52871; Metazoa - 21; Fungi - 539; Plants - 1521; Viruses - 7; Other Eukaryotes - 4817 (source: NCBI BLink). & (gnl|cdd|29071 : 90.3) no description available & (reliability: 408.0) & (original description: Putative RRA4, Description = Type A response regulator RRA4, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf02066_434869-441966' '(at3g16857 : 444.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 1 (RR1); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: response regulator 2 (TAIR:AT4G16110.1); Has 98862 Blast hits to 97820 proteins in 3027 species: Archae - 653; Bacteria - 87858; Metazoa - 53; Fungi - 404; Plants - 2787; Viruses - 5; Other Eukaryotes - 7102 (source: NCBI BLink). & (gnl|cdd|32386 : 103.0) no description available & (q689g8|prr37_orysa : 92.8) Two-component response regulator-like PRR37 (Pseudo-response regulator 37) (OsPRR37) - Oryza sativa (Rice) & (reliability: 888.0) & (original description: Putative rr13, Description = Putative B-type response regulator 13, PFAM = PF00072;PF00249)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf02805_147535-151593' '(at2g25180 : 106.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 12 (RR12); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 10 (TAIR:AT4G31920.1); Has 111867 Blast hits to 110627 proteins in 3082 species: Archae - 684; Bacteria - 99498; Metazoa - 49; Fungi - 566; Plants - 2899; Viruses - 3; Other Eukaryotes - 8168 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative PGSC0003DMG400035052, Description = , PFAM = PF00072;PF00249)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf03245_684921-707941' '(at4g16110 : 172.0) Encodes a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis. Acts in concert with other type-B ARRs in the cytokinin signaling pathway. AHK3 mediates cytokinin-induced phosphorylation of ARR2 on the Asp-80 residue. This phosphorylation plays a positive role of ARR2 in cytokinin-mediated control of leaf longevity.; response regulator 2 (RR2); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 1 (TAIR:AT3G16857.2); Has 95443 Blast hits to 94483 proteins in 2985 species: Archae - 623; Bacteria - 84652; Metazoa - 47; Fungi - 382; Plants - 2721; Viruses - 2; Other Eukaryotes - 7016 (source: NCBI BLink). & (gnl|cdd|47754 : 91.5) no description available & (reliability: 344.0) & (original description: Putative rr12, Description = Two-component system sensor histidine kinase/response regulator, putative, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf04654_291846-294973' '(at5g62920 : 199.0) Encodes a Type-A response regulator that is responsive to cytokinin treatment. Its C-ter domain is very short in comparison to other Arabidopsis ARRs (17 total). Arr6 protein is stabilized by cytokinin.; response regulator 6 (ARR6); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 5 (TAIR:AT3G48100.1); Has 47436 Blast hits to 46969 proteins in 2667 species: Archae - 260; Bacteria - 41739; Metazoa - 17; Fungi - 503; Plants - 1416; Viruses - 4; Other Eukaryotes - 3497 (source: NCBI BLink). & (gnl|cdd|29071 : 81.1) no description available & (reliability: 398.0) & (original description: Putative dkRR8, Description = Putative A-type response regulator 8, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf05324_157591-162753' '(at1g67710 : 352.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 11 (ARR11); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 1 (TAIR:AT3G16857.1); Has 111784 Blast hits to 110359 proteins in 3115 species: Archae - 722; Bacteria - 99003; Metazoa - 40; Fungi - 775; Plants - 2897; Viruses - 3; Other Eukaryotes - 8344 (source: NCBI BLink). & (gnl|cdd|32386 : 110.0) no description available & (q689g9|prr1_orysa : 85.9) Two-component response regulator-like PRR1 (Pseudo-response regulator 1) (OsPRR1) - Oryza sativa (Rice) & (reliability: 704.0) & (original description: Putative rr14, Description = Putative B-type response regulator 14, PFAM = PF00249;PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf05535_452981-456668' '(at3g57040 : 251.0) response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2; response regulator 9 (ARR9); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 3 (TAIR:AT2G41310.1); Has 31916 Blast hits to 31617 proteins in 2439 species: Archae - 203; Bacteria - 27463; Metazoa - 9; Fungi - 302; Plants - 1334; Viruses - 4; Other Eukaryotes - 2601 (source: NCBI BLink). & (gnl|cdd|29071 : 84.9) no description available & (reliability: 502.0) & (original description: Putative ARR9, Description = Two-component response regulator ARR9, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf05767_888659-891451' '(at3g04280 : 100.0) Encodes an atypical subtype of the ARR (Arabidopsis response regulator) protein family. ARR22 is more similar to the receiver domains of hybrid kinases than other response regulators. It acts as a phosphohistidine phosphatase when tested with phospho-AHP5 in vitro suggesting that it might be involved in a two-component phosphorelay. Expression of ARR22 transcripts appears to be localized to the chalaza and to be induced by wounding. Ectopic expression of ARR in other parts of the plant leads to reduced cytokinin-related responses and impaired root, shoot, and flower development. Overexpression of wild-type ARR22 in an arr22 mutant background causes variable defects in plant growth and fertility. But, in the same ar22 background, over-expression of versions of ARR22 that should act as dominant-negative or constitutively active proteins, based on mutations to the conserved Asp residue, do not show any phenotypic abnormalities, raising the possibility that these may not act as canonical response regulators.; response regulator 22 (RR22); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 24 (TAIR:AT5G26594.1); Has 38453 Blast hits to 37735 proteins in 2650 species: Archae - 260; Bacteria - 34151; Metazoa - 17; Fungi - 1133; Plants - 527; Viruses - 9; Other Eukaryotes - 2356 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative PGSC0003DMG400035602, Description = , PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf06207_163880-172363' '(at4g16110 : 175.0) Encodes a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis. Acts in concert with other type-B ARRs in the cytokinin signaling pathway. AHK3 mediates cytokinin-induced phosphorylation of ARR2 on the Asp-80 residue. This phosphorylation plays a positive role of ARR2 in cytokinin-mediated control of leaf longevity.; response regulator 2 (RR2); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 1 (TAIR:AT3G16857.2); Has 95443 Blast hits to 94483 proteins in 2985 species: Archae - 623; Bacteria - 84652; Metazoa - 47; Fungi - 382; Plants - 2721; Viruses - 2; Other Eukaryotes - 7016 (source: NCBI BLink). & (gnl|cdd|47754 : 103.0) no description available & (reliability: 350.0) & (original description: Putative rr13, Description = Two-component response regulator ARR13 family protein, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf06348_62645-67075' '(at3g16857 : 122.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 1 (RR1); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: response regulator 2 (TAIR:AT4G16110.1); Has 98862 Blast hits to 97820 proteins in 3027 species: Archae - 653; Bacteria - 87858; Metazoa - 53; Fungi - 404; Plants - 2787; Viruses - 5; Other Eukaryotes - 7102 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative PGSC0003DMG400038579, Description = , PFAM = PF00249)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf06348_62654-67251' '(at3g16857 : 114.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 1 (RR1); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: response regulator 2 (TAIR:AT4G16110.1); Has 98862 Blast hits to 97820 proteins in 3027 species: Archae - 653; Bacteria - 87858; Metazoa - 53; Fungi - 404; Plants - 2787; Viruses - 5; Other Eukaryotes - 7102 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative PGSC0003DMG400038579, Description = , PFAM = )' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf07437_514344-519331' '(at1g59940 : 202.0) Type A response regulator highly similar to bacterial two-component response regulators. Rapidly induced by cytokinin. Involved in red-light signaling. Acts redundantly with ARR3 in the control of circadian period in a cytokinin-independent manner.; response regulator 3 (ARR3); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 4 (TAIR:AT1G10470.1); Has 60077 Blast hits to 59393 proteins in 2784 species: Archae - 301; Bacteria - 52871; Metazoa - 21; Fungi - 539; Plants - 1521; Viruses - 7; Other Eukaryotes - 4817 (source: NCBI BLink). & (gnl|cdd|29071 : 89.9) no description available & (reliability: 404.0) & (original description: Putative ARR3, Description = Two-component response regulator ARR3, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf08333_780268-783619' '(at3g57040 : 235.0) response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2; response regulator 9 (ARR9); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 3 (TAIR:AT2G41310.1); Has 31916 Blast hits to 31617 proteins in 2439 species: Archae - 203; Bacteria - 27463; Metazoa - 9; Fungi - 302; Plants - 1334; Viruses - 4; Other Eukaryotes - 2601 (source: NCBI BLink). & (reliability: 470.0) & (original description: Putative ARR9, Description = Two-component response regulator ARR9, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf08368_84321-90694' '(at4g16110 : 323.0) Encodes a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis. Acts in concert with other type-B ARRs in the cytokinin signaling pathway. AHK3 mediates cytokinin-induced phosphorylation of ARR2 on the Asp-80 residue. This phosphorylation plays a positive role of ARR2 in cytokinin-mediated control of leaf longevity.; response regulator 2 (RR2); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 1 (TAIR:AT3G16857.2); Has 95443 Blast hits to 94483 proteins in 2985 species: Archae - 623; Bacteria - 84652; Metazoa - 47; Fungi - 382; Plants - 2721; Viruses - 2; Other Eukaryotes - 7016 (source: NCBI BLink). & (gnl|cdd|32386 : 103.0) no description available & (q689g6|prr95_orysa : 94.4) Two-component response regulator-like PRR95 (Pseudo-response regulator 95) (OsPRR95) - Oryza sativa (Rice) & (reliability: 646.0) & (original description: Putative rr16, Description = Putative B-type response regulator 16, PFAM = PF00072;PF00249)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf08653_391347-401613' '(at3g16857 : 105.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 1 (RR1); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: response regulator 2 (TAIR:AT4G16110.1); Has 98862 Blast hits to 97820 proteins in 3027 species: Archae - 653; Bacteria - 87858; Metazoa - 53; Fungi - 404; Plants - 2787; Viruses - 5; Other Eukaryotes - 7102 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative PGSC0003DMG400047331, Description = Putative ovule protein, PFAM = PF00072;PF00249)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf08782_260038-267374' '(at3g16857 : 463.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 1 (RR1); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: response regulator 2 (TAIR:AT4G16110.1); Has 98862 Blast hits to 97820 proteins in 3027 species: Archae - 653; Bacteria - 87858; Metazoa - 53; Fungi - 404; Plants - 2787; Viruses - 5; Other Eukaryotes - 7102 (source: NCBI BLink). & (gnl|cdd|32386 : 104.0) no description available & (q689g8|prr37_orysa : 93.2) Two-component response regulator-like PRR37 (Pseudo-response regulator 37) (OsPRR37) - Oryza sativa (Rice) & (reliability: 926.0) & (original description: Putative rr13, Description = Putative B-type response regulator 13, PFAM = PF00072;PF00249)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf09424_716594-721353' '(at3g56380 : 191.0) response regulator 17; response regulator 17 (RR17); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 16 (TAIR:AT2G40670.1); Has 39813 Blast hits to 39289 proteins in 2430 species: Archae - 260; Bacteria - 34490; Metazoa - 15; Fungi - 615; Plants - 1410; Viruses - 6; Other Eukaryotes - 3017 (source: NCBI BLink). & (gnl|cdd|29071 : 81.8) no description available & (reliability: 382.0) & (original description: Putative RR2, Description = Type-A response regulator, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf14436_205573-211243' '(at3g56380 : 193.0) response regulator 17; response regulator 17 (RR17); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 16 (TAIR:AT2G40670.1); Has 39813 Blast hits to 39289 proteins in 2430 species: Archae - 260; Bacteria - 34490; Metazoa - 15; Fungi - 615; Plants - 1410; Viruses - 6; Other Eukaryotes - 3017 (source: NCBI BLink). & (gnl|cdd|29071 : 80.3) no description available & (reliability: 386.0) & (original description: Putative ARR17, Description = Two-component response regulator ARR17, PFAM = PF00072)' T '27.3.5' 'RNA.regulation of transcription.ARR' 'niben101scf24679_63078-69311' '(at4g16110 : 471.0) Encodes a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis. Acts in concert with other type-B ARRs in the cytokinin signaling pathway. AHK3 mediates cytokinin-induced phosphorylation of ARR2 on the Asp-80 residue. This phosphorylation plays a positive role of ARR2 in cytokinin-mediated control of leaf longevity.; response regulator 2 (RR2); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 1 (TAIR:AT3G16857.2); Has 95443 Blast hits to 94483 proteins in 2985 species: Archae - 623; Bacteria - 84652; Metazoa - 47; Fungi - 382; Plants - 2721; Viruses - 2; Other Eukaryotes - 7016 (source: NCBI BLink). & (gnl|cdd|32386 : 104.0) no description available & (q689g8|prr37_orysa : 92.4) Two-component response regulator-like PRR37 (Pseudo-response regulator 37) (OsPRR37) - Oryza sativa (Rice) & (reliability: 942.0) & (original description: Putative rr13, Description = Putative B-type response regulator 13, PFAM = PF00249;PF00072)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold688_41859-46675' '(at1g10120 : 188.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G68920.2); Has 2297 Blast hits to 2289 proteins in 121 species: Archae - 0; Bacteria - 2; Metazoa - 55; Fungi - 29; Plants - 2202; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative ACE2, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold1291_5729-8325' '(at3g50330 : 127.0) HECATE 2 (HEC2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ovary septum development, transmitting tissue development, carpel formation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: flower development stages, gynoecium developmental stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G67060.1); Has 2920 Blast hits to 2914 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2920; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative HEC1, Description = Transcription factor bHLH87, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold1929_45374-48265' '(at1g74500 : 85.9) Encodes a basic helixñloopñhelix transcription factor that acts downstream of MP in root initiation. TMO7 protein moves to the hypophysis and to vascular cells, contributing to MP-dependent root formation. Promotes the correct definition of the hypophysis cell division plane.; activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1 (BS1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BANQUO 3 (TAIR:AT3G47710.1); Has 97 Blast hits to 97 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative PRE3, Description = Transcription factor PRE3, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold2376_11702-15776' '(at1g22490 : 187.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G72210.1); Has 1544 Blast hits to 1534 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 34; Plants - 1460; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative bHLH1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold2689_8712-12187' '(at5g46830 : 211.0) Calcium-binding transcription factor involved in salt stress signaling.; NACL-inducible gene 1 (NIG1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: Basic helix-loop-helix (bHLH) DNA-binding family protein (TAIR:AT1G32640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p13027|arrs_maize : 82.0) Anthocyanin regulatory R-S protein - Zea mays (Maize) & (reliability: 422.0) & (original description: Putative MYC1, Description = MYC1, PFAM = PF14215;PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold4803_41949-45727' '(at1g72210 : 214.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G22490.1); Has 1596 Blast hits to 1587 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 30; Plants - 1534; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative BHLH96, Description = Transcription factor bHLH96, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold5300_2728-6876' '(at3g06120 : 218.0) Encodes a basic helix-loop-helix (bHLH) protein that controls meristemoid differentiation during stomatal development. In the absence of MUTE, meristemoids abort after excessive asymmetric divisions and fail to differentiate stomata.; MUTE (MUTE); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G24140.1); Has 1269 Blast hits to 1254 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1269; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative MUTE, Description = Transcription factor MUTE, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold5477_20050-63503' '(at2g14760 : 140.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 (TAIR:AT4G33880.1). & (reliability: 280.0) & (original description: Putative EN94, Description = Basic helix-loop-helix family protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold5477_20068-63287' '(at2g14760 : 135.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 (TAIR:AT4G33880.1). & (reliability: 270.0) & (original description: Putative EN94, Description = Helix-loop-helix DNA-binding domain containing protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold6273_32180-37389' '(at4g00050 : 117.0) unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative bHLH7, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold6645_10048-14806' '(at1g49770 : 130.0) Encodes a member of the basic helix loop helix family of transcription factors. Loss of RGE1 function causes shriveled seeds that contain small embryos. The cuticle in the embryos does not develop normally, possible due to the adeherence of the endosperm to the developing embryo. RGE1 is expressed in the endosperm surrounding region which directly surrounds the developing embryo, however it exerts its effect non autonomously- in the developing embryo. Mutant seedlings are extremely sensitive to dessication due to the abnormal cuticle.; RETARDED GROWTH OF EMBRYO 1 (RGE1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: embryo development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: endosperm; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22760.1); Has 1071 Blast hits to 1071 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 65; Fungi - 10; Plants - 987; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative glysoja_033569, Description = Transcription factor bHLH95, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold8590_31476-34371' '(at3g19860 : 120.0) basic Helix-Loop-Helix 121 (bHLH121); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G36060.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative EN138, Description = BHLH transcription factor, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold9682_23789-30449' '(at4g37850 : 92.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative , Description = , PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold9988_34817-46784' '(at2g42280 : 187.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative rau1, Description = Basic helix-loop-helix family protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold10023_2856-8886' '(at4g37850 : 87.4) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative , Description = , PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold10462_64133-68733' '(at1g61660 : 139.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G20640.1). & (reliability: 278.0) & (original description: Putative ACT1, Description = Ethylene-responsive family protein, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold10731_6968-10783' '(at1g68810 : 117.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix 32 (TAIR:AT3G25710.1); Has 3080 Blast hits to 3073 proteins in 197 species: Archae - 0; Bacteria - 9; Metazoa - 353; Fungi - 47; Plants - 2657; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative MTR_5g066080, Description = Transcription factor, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold12382_18334-29080' '(at4g09820 : 276.0) TT8 is a regulation factor that acts in a concerted action with TT1, PAP1 and TTG1 on the regulation of flavonoid pathways, namely proanthocyanidin and anthocyanin biosynthesis. Affects dihydroflavonol 4-reductase gene expression. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. Also important for important for marginal trichome development.; TRANSPARENT TESTA 8 (TT8); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: trichome differentiation, regulation of flavonoid biosynthetic process, regulation of proanthocyanidin biosynthetic process; LOCATED IN: nucleus; EXPRESSED IN: stem, hypocotyl, micropylar endosperm; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G63650.3); Has 2828 Blast hits to 2555 proteins in 185 species: Archae - 0; Bacteria - 2; Metazoa - 59; Fungi - 73; Plants - 2682; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (p13027|arrs_maize : 176.0) Anthocyanin regulatory R-S protein - Zea mays (Maize) & (reliability: 552.0) & (original description: Putative an1, Description = Anthocyanin 1, PFAM = PF00010;PF14215)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold12464_8522-11572' '(at3g50330 : 127.0) HECATE 2 (HEC2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ovary septum development, transmitting tissue development, carpel formation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: flower development stages, gynoecium developmental stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G67060.1); Has 2920 Blast hits to 2914 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2920; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative bHLH113, Description = BHLH transcription factor, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold14206_32464-38911' '(at4g37850 : 107.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative PGSC0003DMG400005101, Description = DNA binding protein, putative, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold14317_36611-39411' '(at5g09750 : 137.0) HECATE 3 (HEC3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: transmitting tissue development, carpel formation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: stigma, transmitting tissue, funicle, septum, vascular system; EXPRESSED DURING: flower development stages, gynoecium developmental stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G00120.1); Has 2886 Blast hits to 2880 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 2841; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative EN94, Description = Transcription factor bHLH87, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold18842_1731-5265' '(at2g14760 : 153.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 (TAIR:AT4G33880.1). & (reliability: 306.0) & (original description: Putative BHLH84, Description = Transcription factor bHLH84, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold19290_684-4541' '(at1g27740 : 108.0) Basic helix-loop-helix (bHLH) transcription factor that is sufficient to promote postmitotic cell growth in root-hair cells. RSL4 is a direct transcriptional target of RHD6; root hair defective 6-like 4 (RSL4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root hair initiation, response to auxin stimulus, positive regulation of transcription, cell growth, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: trichoblast, root; EXPRESSED DURING: 5 root hair formation; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G43175.1); Has 2802 Blast hits to 2796 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 24; Plants - 2776; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative LRL2, Description = Helix-loop-helix DNA-binding domain containing protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold19957_9493-16495' '(at4g00050 : 128.0) unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative bHLH7, Description = Helix-loop-helix DNA-binding domain containing protein, expressed, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold20751_3904-6617' '(at3g17100 : 127.0) sequence-specific DNA binding transcription factors; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G06590.2); Has 168 Blast hits to 168 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 166; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative AIF2, Description = ATBS1 interacting factor 2, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold21571_17660-21166' '(at4g37850 : 136.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative bHLH, Description = Transcription factor bHLH25, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold24176_9946-13663' '(at2g14760 : 145.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 (TAIR:AT4G33880.1). & (reliability: 290.0) & (original description: Putative EN95, Description = Helix-loop-helix DNA-binding domain containing protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold26682_17181-23027' '(at4g00050 : 125.0) unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative bHLH7, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold28340_13192-16121' '(at1g30670 : 87.8) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G34820.1); Has 1015 Blast hits to 1013 proteins in 53 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 4; Plants - 1002; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative , Description = Transcription factor bHLH52, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold34344_12604-15463' '(at4g20970 : 110.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response to fungus, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G10586.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative RCOM_1674290, Description = DNA binding protein, putative, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold34388_9136-12815' '(at1g06150 : 624.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 7 (TAIR:AT2G31280.1). & (q76c99|rf1_orysa : 95.1) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1248.0) & (original description: Putative EMB1444, Description = Pentatricopeptide repeat-containing protein At1g06145, PFAM = PF01535;PF01535;PF13041;PF13041;PF13041)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold34681_3307-9233' '(at3g19860 : 214.0) basic Helix-Loop-Helix 121 (bHLH121); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G36060.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative BHLH11, Description = Transcription factor bHLH11, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold37346_8063-11454' '(at4g37850 : 142.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative bHLH, Description = Transcription factor bHLH25, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold39120_4714-12225' '(at3g26744 : 328.0) Encodes a MYC-like bHLH transcriptional activator that binds specifically to the MYC recognition sequences in the CBF3 promoter. Mutants are defective in cold-regulated gene expression. Cold stress triggers protein degradation of nuclear GFPICE1 protein, and the RING finger protein HOS1 is required. Sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance.; INDUCER OF CBF EXPRESSION 1 (ICE1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G12860.1); Has 2623 Blast hits to 2616 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 30; Plants - 2572; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative SCRM, Description = Transcription factor ICE1, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold39174_7181-14172' '(at3g57800 : 196.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G42300.1); Has 2084 Blast hits to 2078 proteins in 112 species: Archae - 0; Bacteria - 2; Metazoa - 24; Fungi - 38; Plants - 2016; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative BHLH48, Description = Transcription factor bHLH48, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold46612_343-6390' '(at4g02590 : 224.0) unfertilized embryo sac 12 (UNE12); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G03040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative rau1, Description = BHLH transcription factor, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold48802_1-4095' '(at3g26744 : 327.0) Encodes a MYC-like bHLH transcriptional activator that binds specifically to the MYC recognition sequences in the CBF3 promoter. Mutants are defective in cold-regulated gene expression. Cold stress triggers protein degradation of nuclear GFPICE1 protein, and the RING finger protein HOS1 is required. Sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance.; INDUCER OF CBF EXPRESSION 1 (ICE1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G12860.1); Has 2623 Blast hits to 2616 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 30; Plants - 2572; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 654.0) & (original description: Putative bHLH2, Description = Inducer of CBF expression 1, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold49301_1793-5826' '(at4g36540 : 149.0) BR enhanced expression 2 (BEE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G18300.1); Has 2103 Blast hits to 2095 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 34; Plants - 2033; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative ACE1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold49510_6253-10594' '(at5g51790 : 89.7) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G25410.1); Has 302 Blast hits to 302 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 301; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative Ccrd_011505, Description = Myc-type, basic helix-loop-helix (BHLH) domain-containing protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold53234_9333-13037' '(at2g31220 : 191.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G06170.2); Has 1822 Blast hits to 1822 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 26; Plants - 1767; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative DTD, Description = Transcription factor bHLH91, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold53234_9774-13076' '(at2g31220 : 191.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G06170.2); Has 1822 Blast hits to 1822 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 26; Plants - 1767; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative DTD, Description = Transcription factor bHLH91, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold62620_4711-10152' '(at5g62610 : 168.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BIG PETAL P (TAIR:AT1G59640.1); Has 2341 Blast hits to 2333 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 49; Plants - 2274; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative ACE2, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold68913_1-6891' '(at4g36930 : 125.0) Encodes a transcription factor of the bHLH protein family. Mutants have abnormal, unfused carpels and reduced seed dormancy.; SPATULA (SPT); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G67110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative bHLH7, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold72041_3432-8836' '(at1g49770 : 167.0) Encodes a member of the basic helix loop helix family of transcription factors. Loss of RGE1 function causes shriveled seeds that contain small embryos. The cuticle in the embryos does not develop normally, possible due to the adeherence of the endosperm to the developing embryo. RGE1 is expressed in the endosperm surrounding region which directly surrounds the developing embryo, however it exerts its effect non autonomously- in the developing embryo. Mutant seedlings are extremely sensitive to dessication due to the abnormal cuticle.; RETARDED GROWTH OF EMBRYO 1 (RGE1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: embryo development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: endosperm; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22760.1); Has 1071 Blast hits to 1071 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 65; Fungi - 10; Plants - 987; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative BHLH95, Description = Transcription factor bHLH95, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold81794_714-3205' '(at5g01310 : 115.0) Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro.; APRATAXIN-like (APTX); FUNCTIONS IN: adenylylsulfatase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: sulfur metabolic process, purine ribonucleotide metabolic process, regulation of transcription; LOCATED IN: intracellular, nucleus, chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Appr-1-p processing (InterPro:IPR002589), Histidine triad (HIT) protein (InterPro:IPR001310), Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Histidine triad motif (InterPro:IPR011151), Helix-loop-helix DNA-binding (InterPro:IPR011598), Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G21330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7xaq6|lax_orysa : 107.0) Transcription factor LAX PANICLE - Oryza sativa (Rice) & (reliability: 230.0) & (original description: Putative HEC1, Description = Basic helix-loop-helix family protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold83876_1857-6444' '(at3g07340 : 226.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G48560.1); Has 2639 Blast hits to 2308 proteins in 133 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 52; Plants - 2177; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative BHLH62, Description = Transcription factor bHLH62, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold89409_1-4677' '(at3g07340 : 207.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G48560.1); Has 2639 Blast hits to 2308 proteins in 133 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 52; Plants - 2177; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative ACE1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold89539_1436-5510' '(at1g51140 : 138.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G42280.1); Has 1835 Blast hits to 1829 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 5; Plants - 1818; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative rau1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold95176_850-4669' '(at5g65640 : 244.0) beta HLH protein 93 (bHLH093); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G10570.1); Has 2660 Blast hits to 2654 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 20; Plants - 2556; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 488.0) & (original description: Putative ICE4, Description = Inducer of CBF expression 4, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold100513_627-3978' '(at2g31210 : 199.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G06170.2); Has 1830 Blast hits to 1818 proteins in 133 species: Archae - 2; Bacteria - 0; Metazoa - 18; Fungi - 11; Plants - 1605; Viruses - 5; Other Eukaryotes - 189 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative DTD, Description = AtbHLH10, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.3scaffold107005_1-3243' '(at3g24140 : 336.0) Encodes a basic helix-loop-helix transcription factor whose activity is required to promote differentiation of stomatal guard cells and to halt proliferative divisions in their immediate precursors. Both transcript and protein are expressed in and are required for halting divisions at the end of the stomatal lineage. It also has a role in the promotion of guard cell fate and in controlling the transition from guard mother cell to guard cell.; FAMA (FMA); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G72210.1); Has 1771 Blast hits to 1747 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 80; Plants - 1654; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 672.0) & (original description: Putative FAMA, Description = Transcription factor FAMA, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold27_65584-68655' '(at3g56970 : 139.0) Encodes a member of the basic helix-loop-helix transcription factor family protein.; BHLH038; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Achaete-scute transcription factor related (InterPro:IPR015660), Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G56980.1); Has 474 Blast hits to 474 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 91; Fungi - 14; Plants - 368; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative BnaA06g07480D, Description = BnaA05g34220D protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold76_245464-248162' '(at3g17100 : 126.0) sequence-specific DNA binding transcription factors; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G06590.2); Has 168 Blast hits to 168 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 166; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative AIF2, Description = ATBS1 interacting factor 2, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold355_148087-277783' '(at2g31220 : 191.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G06170.2); Has 1822 Blast hits to 1822 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 26; Plants - 1767; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative DTD, Description = Transcription factor bHLH91, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold468_584865-588778' '(at5g65640 : 243.0) beta HLH protein 93 (bHLH093); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G10570.1); Has 2660 Blast hits to 2654 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 20; Plants - 2556; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative BHLH93, Description = Transcription factor bHLH93, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold562_629966-633260' '(at4g37850 : 137.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative bHLH, Description = Transcription factor bHLH25, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold562_630093-633399' '(at4g37850 : 140.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative bHLH, Description = Transcription factor bHLH25, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold812_275437-279410' '(at2g42280 : 205.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 410.0) & (original description: Putative rau1, Description = Basic helix-loop-helix (BHLH) DNA-binding superfamily, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold847_396659-486490' '(at3g50330 : 127.0) HECATE 2 (HEC2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ovary septum development, transmitting tissue development, carpel formation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: flower development stages, gynoecium developmental stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G67060.1); Has 2920 Blast hits to 2914 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2920; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative HEC1, Description = Transcription factor bHLH87, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold882_122666-130323' '(at4g00050 : 144.0) unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative PGSC0003DMG400025976, Description = Basic helix-loop-helix DNA-binding superfamily protein isoform 3, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold1035_421269-438240' '(at4g38070 : 216.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11940.1); Has 194780 Blast hits to 83936 proteins in 3334 species: Archae - 2743; Bacteria - 33979; Metazoa - 84944; Fungi - 15379; Plants - 11807; Viruses - 735; Other Eukaryotes - 45193 (source: NCBI BLink). & (gnl|cdd|35383 : 106.0) no description available & (reliability: 432.0) & (original description: Putative PGSC0003DMG400016132, Description = Basic helix loop helix protein, putative, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold1147_730733-734845' '(at3g24140 : 334.0) Encodes a basic helix-loop-helix transcription factor whose activity is required to promote differentiation of stomatal guard cells and to halt proliferative divisions in their immediate precursors. Both transcript and protein are expressed in and are required for halting divisions at the end of the stomatal lineage. It also has a role in the promotion of guard cell fate and in controlling the transition from guard mother cell to guard cell.; FAMA (FMA); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G72210.1); Has 1771 Blast hits to 1747 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 80; Plants - 1654; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 668.0) & (original description: Putative bHLH82, Description = BHLH transcription factor, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold1284_431935-450766' '(at1g68810 : 204.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix 32 (TAIR:AT3G25710.1); Has 3080 Blast hits to 3073 proteins in 197 species: Archae - 0; Bacteria - 9; Metazoa - 353; Fungi - 47; Plants - 2657; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative EN53, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold1643_58446-69192' '(at4g09820 : 234.0) TT8 is a regulation factor that acts in a concerted action with TT1, PAP1 and TTG1 on the regulation of flavonoid pathways, namely proanthocyanidin and anthocyanin biosynthesis. Affects dihydroflavonol 4-reductase gene expression. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. Also important for important for marginal trichome development.; TRANSPARENT TESTA 8 (TT8); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: trichome differentiation, regulation of flavonoid biosynthetic process, regulation of proanthocyanidin biosynthetic process; LOCATED IN: nucleus; EXPRESSED IN: stem, hypocotyl, micropylar endosperm; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G63650.3); Has 2828 Blast hits to 2555 proteins in 185 species: Archae - 0; Bacteria - 2; Metazoa - 59; Fungi - 73; Plants - 2682; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (p13027|arrs_maize : 146.0) Anthocyanin regulatory R-S protein - Zea mays (Maize) & (reliability: 468.0) & (original description: Putative an1, Description = Anthocyanin 1, PFAM = PF00010;PF14215)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold1693_324709-335746' '(at2g20180 : 172.0) Encodes a novel Myc-related bHLH transcription factor that has transcriptional activation activity in the dark. It is a key negative regulator of phytochrome-mediated seed germination and acts by inhibiting chlorophyll biosynthesis, light-mediated suppression of hypocotyl elongation and far-red light-mediated suppression of seed germination, and promoting negative gravitropism in hypocotyls. Light reduces this activity in a phy-dependent manner. The protein preferentially interacts with the Pfr forms of Phytochrome A (PhyA) and Phytochrome B (PhyB), is physically associated with APRR1/TOC1 and is degraded in red (R) and far-red (FR) light through the ubiquitin (ub)-26S proteasome pathway to optimize photomorphogenic development in Arabidopsis. It also negatively regulates GA3 oxidase expression.; phytochrome interacting factor 3-like 5 (PIL5); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G28800.1). & (reliability: 344.0) & (original description: Putative PIF1, Description = Transcription factor PIF1, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold1790_344530-351459' '(at2g42300 : 134.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G57800.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative BHLH48, Description = Transcription factor bHLH48, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold1855_239331-242872' '(at5g65640 : 238.0) beta HLH protein 93 (bHLH093); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G10570.1); Has 2660 Blast hits to 2654 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 20; Plants - 2556; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 476.0) & (original description: Putative bHLH2, Description = Inducer of CBF expression 1, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold2661_370732-374111' '(at5g51790 : 84.7) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G25410.1); Has 302 Blast hits to 302 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 301; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative PGSC0003DMG400010526, Description = Basic helix-loop-helix transcription factor, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold3748_6875-17195' '(at4g25410 : 84.7) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G51790.1); Has 313 Blast hits to 313 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 8; Plants - 300; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative PGSC0003DMG400027959, Description = Basic helix-loop-helix DNA-binding superfamily protein, putative, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold4463_121020-125256' '(at3g47640 : 114.0) Encodes POPEYE (PYE), a bHLH transcription factor regulating response to iron deficiency in Arabidopsis roots.; POPEYE (PYE); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to iron ion starvation, iron ion homeostasis, regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G36060.1). & (reliability: 228.0) & (original description: Putative BHLH15, Description = BHLH domain class transcription factor, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold4498_86726-91648' '(at3g06120 : 141.0) Encodes a basic helix-loop-helix (bHLH) protein that controls meristemoid differentiation during stomatal development. In the absence of MUTE, meristemoids abort after excessive asymmetric divisions and fail to differentiate stomata.; MUTE (MUTE); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G24140.1); Has 1269 Blast hits to 1254 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1269; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative SPCH, Description = Transcription factor SPEECHLESS, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold4501_167126-173579' '(at5g65640 : 224.0) beta HLH protein 93 (bHLH093); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G10570.1); Has 2660 Blast hits to 2654 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 20; Plants - 2556; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative EN44, Description = Transcription factor bHLH93, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold4709_97934-104944' '(at4g00050 : 129.0) unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative bHLH7, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold5123_682-7290' '(at2g16910 : 376.0) Encodes a basic helix-loop helix transcription factor involved in tapetal cell development. Loss of function mutations are male sterile. AMS binds to a region termed the E box of target gene promoters.; ABORTED MICROSPORES (AMS); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: tapetal layer development, regulation of transcription, pollen development; LOCATED IN: nucleus; EXPRESSED IN: petal, leaf whorl, sepal, flower, seed; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G26744.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 752.0) & (original description: Putative bHLH, Description = BHLH transcription factor, PFAM = PF00010;PF14215)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold5454_154683-160124' '(at5g62610 : 224.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BIG PETAL P (TAIR:AT1G59640.1); Has 2341 Blast hits to 2333 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 49; Plants - 2274; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative BHLH79, Description = Transcription factor bHLH79, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold5518_65025-70845' '(at2g24260 : 140.0) Encodes a basic helix-loop-helix (bHLH) protein that regulates root hair development. One of the three Arabidopsis homologs of the Lotus japonicus ROOTHAIRLESS1 (LjRHL1) gene: At2g24260 (AtLRL1), At4g30980 (AtLRL2), and At5g58010 (AtLRL3).; LJRHL1-like 1 (LRL1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root hair cell development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: LJRHL1-like 2 (TAIR:AT4G30980.1); Has 3384 Blast hits to 3378 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 150; Fungi - 13; Plants - 3219; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative BHLH66, Description = Transcription factor bHLH66, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold6751_29599-35876' '(at2g27230 : 177.0) Encodes a nuclear-localized transcriptional activator with weak sequence similarity to basic helix-loop-helix(bHLH)-domain proteins. It promotes the production of stele cells in root meristems and is required to establish and maintain the normal vascular cell number and pattern in primary and lateral roots.; LONESOME HIGHWAY (LHW); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase WNK (With No Lysine)-related (TAIR:AT1G64625.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative LHW, Description = BHLH transcription factor-like protein, PFAM = PF14215)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold6757_26083-29869' '(at5g65640 : 221.0) beta HLH protein 93 (bHLH093); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G10570.1); Has 2660 Blast hits to 2654 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 20; Plants - 2556; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative bHLH2, Description = Inducer of CBF expression 1, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold7324_31818-37255' '(at5g62610 : 171.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BIG PETAL P (TAIR:AT1G59640.1); Has 2341 Blast hits to 2333 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 49; Plants - 2274; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative ACE2, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold8668_28516-32276' '(at3g21330 : 197.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G00120.1); Has 2796 Blast hits to 2791 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 6; Plants - 2786; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative BHLH87, Description = Transcription factor bHLH87, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'nbv0.5scaffold10013_1436-5955' '(at2g42280 : 133.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative rau1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00001020ctg001_1-4056' '(at2g14760 : 163.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 (TAIR:AT4G33880.1). & (reliability: 326.0) & (original description: Putative BHLH84, Description = Transcription factor bHLH84, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00001631ctg006_17119-23007' '(at4g00050 : 134.0) unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative bHLH7, Description = Transcription factor UNE10, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00003002ctg001_1-1527' '(at4g37850 : 92.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00004501ctg017_1-3796' '(at1g22490 : 189.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G72210.1); Has 1544 Blast hits to 1534 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 34; Plants - 1460; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative bHLH82, Description = BHLH transcription factor, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00004957ctg024_1046-8400' '(at4g36930 : 127.0) Encodes a transcription factor of the bHLH protein family. Mutants have abnormal, unfused carpels and reduced seed dormancy.; SPATULA (SPT); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G67110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative bHLH7, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00005031ctg010_20166-25068' '(at1g05805 : 187.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G43140.2); Has 2662 Blast hits to 2007 proteins in 137 species: Archae - 2; Bacteria - 54; Metazoa - 424; Fungi - 144; Plants - 1472; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative rau1, Description = Basic helix-loop-helix family protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00005398ctg001_327-3157' '(at5g01310 : 115.0) Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro.; APRATAXIN-like (APTX); FUNCTIONS IN: adenylylsulfatase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: sulfur metabolic process, purine ribonucleotide metabolic process, regulation of transcription; LOCATED IN: intracellular, nucleus, chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Appr-1-p processing (InterPro:IPR002589), Histidine triad (HIT) protein (InterPro:IPR001310), Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Histidine triad motif (InterPro:IPR011151), Helix-loop-helix DNA-binding (InterPro:IPR011598), Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G21330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7xaq6|lax_orysa : 109.0) Transcription factor LAX PANICLE - Oryza sativa (Rice) & (reliability: 230.0) & (original description: Putative HEC1, Description = Basic helix-loop-helix family protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00006325ctg012_18028-21767' '(at1g72210 : 240.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G22490.1); Has 1596 Blast hits to 1587 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 30; Plants - 1534; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 480.0) & (original description: Putative bHLH1, Description = Basic helix loop helix (BHLH) DNA-binding family protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00007460ctg007_1-3077' '(at3g24140 : 245.0) Encodes a basic helix-loop-helix transcription factor whose activity is required to promote differentiation of stomatal guard cells and to halt proliferative divisions in their immediate precursors. Both transcript and protein are expressed in and are required for halting divisions at the end of the stomatal lineage. It also has a role in the promotion of guard cell fate and in controlling the transition from guard mother cell to guard cell.; FAMA (FMA); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G72210.1); Has 1771 Blast hits to 1747 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 80; Plants - 1654; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 490.0) & (original description: Putative bHLH1, Description = Basic helix loop helix (BHLH) DNA-binding family protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00010266ctg019_3909-10856' '(at3g57800 : 210.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G42300.1); Has 2084 Blast hits to 2078 proteins in 112 species: Archae - 0; Bacteria - 2; Metazoa - 24; Fungi - 38; Plants - 2016; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 420.0) & (original description: Putative BHLH48, Description = Transcription factor bHLH48, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00010501ctg004_224-6254' '(at4g37850 : 87.8) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative , Description = , PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00012728ctg006_6009-12350' '(at4g02590 : 204.0) unfertilized embryo sac 12 (UNE12); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G03040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative UNE12, Description = Transcription factor UNE12, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00013946ctg001_11898-14827' '(at2g34820 : 89.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G30670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative , Description = Transcription factor bHLH52, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00014367ctg001_4511-8644' '(at1g72210 : 236.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G22490.1); Has 1596 Blast hits to 1587 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 30; Plants - 1534; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative BHLH96, Description = Transcription factor bHLH96, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00015312ctg001_3320-7955' '(at3g20640 : 164.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G61660.1); Has 3293 Blast hits to 1784 proteins in 150 species: Archae - 0; Bacteria - 39; Metazoa - 261; Fungi - 101; Plants - 1460; Viruses - 0; Other Eukaryotes - 1432 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative B70, Description = Ethylene-responsive family protein, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00015337ctg000_2990-7186' '(at4g00870 : 213.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G16430.1); Has 3066 Blast hits to 2737 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 39; Plants - 2956; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative myc2, Description = Transcription factor MYC2, PFAM = PF00010;PF14215;PF14215)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00015775ctg008_76-4105' '(at2g14760 : 158.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 (TAIR:AT4G33880.1). & (reliability: 316.0) & (original description: Putative EN94, Description = Helix-loop-helix DNA-binding domain containing protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00016390ctg003_17674-24284' '(at4g02590 : 213.0) unfertilized embryo sac 12 (UNE12); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G03040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative UNE12, Description = Transcription factor UNE12, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00016434ctg010_6115-10774' '(at1g61660 : 106.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G20640.1). & (reliability: 212.0) & (original description: Putative , Description = Ethylene-responsive family protein, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00017226ctg006_6444-9094' '(at3g17100 : 126.0) sequence-specific DNA binding transcription factors; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G06590.2); Has 168 Blast hits to 168 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 166; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative AIF2, Description = ATBS1 interacting factor 2, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00018799ctg001_235-4577' '(at1g06170 : 160.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G31220.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative DTD, Description = AtbHLH10, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00018799ctg004_648-4099' '(at2g31210 : 195.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G06170.2); Has 1830 Blast hits to 1818 proteins in 133 species: Archae - 2; Bacteria - 0; Metazoa - 18; Fungi - 11; Plants - 1605; Viruses - 5; Other Eukaryotes - 189 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative EAT1, Description = Transcription factor EAT1, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00020790ctg024_1431-4205' '(at3g19860 : 184.0) basic Helix-Loop-Helix 121 (bHLH121); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G36060.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative EN138, Description = BHLH transcription factor, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00020960ctg005_3359-8543' '(at5g53210 : 229.0) Encodes a basic helix-loop-helix (bHLH) transcription factor that is necessary and sufficient for the asymmetric divisions that establish the stomatal lineage in Arabidopsis thaliana. Expression of SPCH in young epidermal cells allows these cells to make asymmetric divisions. SPCH is a substrate of a kinase MPK3 and MPK6.; SPEECHLESS (SPCH); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G06120.1); Has 3630 Blast hits to 3207 proteins in 306 species: Archae - 0; Bacteria - 54; Metazoa - 562; Fungi - 218; Plants - 2401; Viruses - 108; Other Eukaryotes - 287 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative SPCH, Description = Transcription factor SPEECHLESS, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00020974ctg004_973-4834' '(at5g65640 : 243.0) beta HLH protein 93 (bHLH093); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G10570.1); Has 2660 Blast hits to 2654 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 20; Plants - 2556; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative BHLH93, Description = Transcription factor bHLH93, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00021253ctg008_1-3327' '(at5g65640 : 221.0) beta HLH protein 93 (bHLH093); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G10570.1); Has 2660 Blast hits to 2654 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 20; Plants - 2556; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative bHLH2, Description = Inducer of CBF expression 1, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00021384ctg003_4396-7994' '(at5g51790 : 114.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G25410.1); Has 302 Blast hits to 302 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 301; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative BHLH36, Description = Transcription factor bHLH36, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00022664ctg011_4737-9091' '(at2g42280 : 204.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative rau1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00026194ctg004_472-4308' '(at3g28857 : 92.8) basic helix-loop-helix (bHLH) DNA-binding family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: regulation of transcription; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding family protein (TAIR:AT5G39860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative PRE5, Description = Transcription factor PRE5, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00026245ctg003_2771-5898' '(at3g26744 : 117.0) Encodes a MYC-like bHLH transcriptional activator that binds specifically to the MYC recognition sequences in the CBF3 promoter. Mutants are defective in cold-regulated gene expression. Cold stress triggers protein degradation of nuclear GFPICE1 protein, and the RING finger protein HOS1 is required. Sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance.; INDUCER OF CBF EXPRESSION 1 (ICE1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G12860.1); Has 2623 Blast hits to 2616 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 30; Plants - 2572; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative bHLH2, Description = Inducer of CBF expression 1, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00027024ctg001_1293-6619' '(at5g54680 : 229.0) iaa-leucine resistant3 (ILR3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative ILR3, Description = Transcription factor ILR3, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00030869ctg004_1-6905' '(at2g24260 : 183.0) Encodes a basic helix-loop-helix (bHLH) protein that regulates root hair development. One of the three Arabidopsis homologs of the Lotus japonicus ROOTHAIRLESS1 (LjRHL1) gene: At2g24260 (AtLRL1), At4g30980 (AtLRL2), and At5g58010 (AtLRL3).; LJRHL1-like 1 (LRL1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root hair cell development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: LJRHL1-like 2 (TAIR:AT4G30980.1); Has 3384 Blast hits to 3378 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 150; Fungi - 13; Plants - 3219; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative BHLH66, Description = Transcription factor bHLH66, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00032880ctg004_1-2363' '(at2g31220 : 159.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G06170.2); Has 1822 Blast hits to 1822 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 26; Plants - 1767; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative DTD, Description = Transcription factor bHLH91, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00043986ctg002_2558-6670' '(at3g07340 : 170.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G48560.1); Has 2639 Blast hits to 2308 proteins in 133 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 52; Plants - 2177; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative ACE2, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00044258ctg005_1-7616' '(at2g24260 : 166.0) Encodes a basic helix-loop-helix (bHLH) protein that regulates root hair development. One of the three Arabidopsis homologs of the Lotus japonicus ROOTHAIRLESS1 (LjRHL1) gene: At2g24260 (AtLRL1), At4g30980 (AtLRL2), and At5g58010 (AtLRL3).; LJRHL1-like 1 (LRL1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root hair cell development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: LJRHL1-like 2 (TAIR:AT4G30980.1); Has 3384 Blast hits to 3378 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 150; Fungi - 13; Plants - 3219; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative BHLH66, Description = Transcription factor bHLH66, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00045919ctg009_600-9538' '(at1g35460 : 164.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G09180.1); Has 1965 Blast hits to 1959 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 1958; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative BHLH80, Description = Transcription factor bHLH80, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00047129ctg001_1-4101' '(at3g07340 : 232.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G48560.1); Has 2639 Blast hits to 2308 proteins in 133 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 52; Plants - 2177; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink). & (reliability: 464.0) & (original description: Putative BHLH62, Description = Transcription factor bHLH62, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00048487ctg001_14672-17844' '(at1g09250 : 100.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G17100.2); Has 250 Blast hits to 250 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 250; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative BHLH149, Description = Transcription factor bHLH149, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00048537ctg009_30173-34355' '(at1g27740 : 107.0) Basic helix-loop-helix (bHLH) transcription factor that is sufficient to promote postmitotic cell growth in root-hair cells. RSL4 is a direct transcriptional target of RHD6; root hair defective 6-like 4 (RSL4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root hair initiation, response to auxin stimulus, positive regulation of transcription, cell growth, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: trichoblast, root; EXPRESSED DURING: 5 root hair formation; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G43175.1); Has 2802 Blast hits to 2796 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 24; Plants - 2776; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative LRL2, Description = Helix-loop-helix DNA-binding domain containing protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00048586ctg000_9939-13381' '(at2g31210 : 203.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G06170.2); Has 1830 Blast hits to 1818 proteins in 133 species: Archae - 2; Bacteria - 0; Metazoa - 18; Fungi - 11; Plants - 1605; Viruses - 5; Other Eukaryotes - 189 (source: NCBI BLink). & (reliability: 406.0) & (original description: Putative DTD, Description = Basic helix-loop-helix protein TIP2, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben044scf00056939ctg000_1427-4594' '(at4g37850 : 140.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative bHLH, Description = Transcription factor bHLH25, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101ctg15612_1594-4554' '(at1g30670 : 82.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G34820.1); Has 1015 Blast hits to 1013 proteins in 53 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 4; Plants - 1002; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative EN123, Description = Transcription factor bHLH52, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00024_75134-78945' '(at5g62610 : 207.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BIG PETAL P (TAIR:AT1G59640.1); Has 2341 Blast hits to 2333 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 49; Plants - 2274; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative BHLH79, Description = Transcription factor bHLH79, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00047_374011-390434' '(at1g05805 : 199.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G43140.2); Has 2662 Blast hits to 2007 proteins in 137 species: Archae - 2; Bacteria - 54; Metazoa - 424; Fungi - 144; Plants - 1472; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative rau1, Description = Predicted protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00067_319165-322623' '(at3g21330 : 183.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G00120.1); Has 2796 Blast hits to 2791 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 6; Plants - 2786; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative BHLH87, Description = Transcription factor bHLH87, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00069_347139-351123' '(at4g37850 : 120.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative bHLH, Description = Transcription factor bHLH25, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00069_822017-833163' '(at5g65640 : 229.0) beta HLH protein 93 (bHLH093); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G10570.1); Has 2660 Blast hits to 2654 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 20; Plants - 2556; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative BHLH61, Description = Transcription factor bHLH61, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00129_55643-58377' '(at3g50330 : 127.0) HECATE 2 (HEC2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ovary septum development, transmitting tissue development, carpel formation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: flower development stages, gynoecium developmental stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G67060.1); Has 2920 Blast hits to 2914 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2920; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative HEC1, Description = Transcription factor bHLH87, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00153_78428-83980' '(at3g26744 : 326.0) Encodes a MYC-like bHLH transcriptional activator that binds specifically to the MYC recognition sequences in the CBF3 promoter. Mutants are defective in cold-regulated gene expression. Cold stress triggers protein degradation of nuclear GFPICE1 protein, and the RING finger protein HOS1 is required. Sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance.; INDUCER OF CBF EXPRESSION 1 (ICE1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G12860.1); Has 2623 Blast hits to 2616 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 30; Plants - 2572; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 652.0) & (original description: Putative SCRM, Description = Transcription factor ICE1, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00153_80706-83869' '(at3g26744 : 133.0) Encodes a MYC-like bHLH transcriptional activator that binds specifically to the MYC recognition sequences in the CBF3 promoter. Mutants are defective in cold-regulated gene expression. Cold stress triggers protein degradation of nuclear GFPICE1 protein, and the RING finger protein HOS1 is required. Sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance.; INDUCER OF CBF EXPRESSION 1 (ICE1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G12860.1); Has 2623 Blast hits to 2616 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 30; Plants - 2572; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative bHLH2, Description = Inducer of CBF expression 1, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00165_1018719-1025162' '(at2g27230 : 328.0) Encodes a nuclear-localized transcriptional activator with weak sequence similarity to basic helix-loop-helix(bHLH)-domain proteins. It promotes the production of stele cells in root meristems and is required to establish and maintain the normal vascular cell number and pattern in primary and lateral roots.; LONESOME HIGHWAY (LHW); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase WNK (With No Lysine)-related (TAIR:AT1G64625.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative LHW, Description = BHLH transcription factor-like protein, PFAM = PF14215)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00182_64345-67886' '(at3g56970 : 147.0) Encodes a member of the basic helix-loop-helix transcription factor family protein.; BHLH038; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Achaete-scute transcription factor related (InterPro:IPR015660), Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G56980.1); Has 474 Blast hits to 474 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 91; Fungi - 14; Plants - 368; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative EN7, Description = Transcription factor ORG2, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00228_1108272-1112417' '(at3g07340 : 229.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G48560.1); Has 2639 Blast hits to 2308 proteins in 133 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 52; Plants - 2177; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative BHLH62, Description = Transcription factor bHLH62, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00276_16919-28639' '(at3g56770 : 80.1) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G41130.1); Has 75 Blast hits to 75 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative , Description = Basic helix-loop-helix (BHLH) DNA-binding superfamily, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00376_95991-100094' '(at5g50915 : 162.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to gibberellin stimulus; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G68920.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative Os08g0536800, Description = BHLH transcription factor-like protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00378_329298-331897' '(at3g50330 : 137.0) HECATE 2 (HEC2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ovary septum development, transmitting tissue development, carpel formation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: flower development stages, gynoecium developmental stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G67060.1); Has 2920 Blast hits to 2914 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2920; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q7xaq6|lax_orysa : 84.7) Transcription factor LAX PANICLE - Oryza sativa (Rice) & (reliability: 274.0) & (original description: Putative HEC1, Description = Transcription factor bHLH87, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00397_524743-532400' '(at4g00050 : 169.0) unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative EN108, Description = AtbHLH16, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00415_27959-33957' '(at4g02590 : 178.0) unfertilized embryo sac 12 (UNE12); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G03040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative ACE1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00415_358964-364442' '(at4g14410 : 186.0) basic Helix-Loop-Helix 104 (bHLH104); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G23210.1); Has 891 Blast hits to 888 proteins in 95 species: Archae - 2; Bacteria - 8; Metazoa - 23; Fungi - 3; Plants - 829; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative ILR3, Description = Transcription factor ILR3, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00442_131465-134553' '(at5g50010 : 99.0) sequence-specific DNA binding transcription factors;transcription regulators; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;transcription regulators (TAIR:AT5G64340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00446_555783-558583' '(at4g00120 : 137.0) INDEHISCENT (IND); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: polar nucleus fusion, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G09750.1); Has 2280 Blast hits to 2276 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2280; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative HEC1, Description = Transcription factor bHLH87, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00522_118699-122289' '(at1g73830 : 176.0) BR enhanced expression 3 (BEE3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BR enhanced expression 1 (TAIR:AT1G18400.1). & (reliability: 352.0) & (original description: Putative BEE3, Description = Transcription factor BEE 3, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00565_10542-15439' '(at1g01260 : 546.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ABA-inducible BHLH-type transcription factor (TAIR:AT2G46510.1). & (p13027|arrs_maize : 88.2) Anthocyanin regulatory R-S protein - Zea mays (Maize) & (reliability: 1092.0) & (original description: Putative BHLH13, Description = Transcription factor bHLH13, PFAM = PF14215;PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00603_91146-94966' '(at1g01260 : 469.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ABA-inducible BHLH-type transcription factor (TAIR:AT2G46510.1). & (reliability: 938.0) & (original description: Putative myc2, Description = Transcription factor MYC2, PFAM = PF00010;PF14215)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00639_317081-334106' '(at2g28160 : 225.0) Encodes a putative transcription factor that regulates iron uptake responses. mRNA is detected in the outer cell layers of the root and accumulates in response to iron deficiency. The expression of many iron-regulated genes is dependent on FIT1. It specifically regulates FRO2 at the level of mRNA accumulation and IRT1 at the level of protein accumulation.Similar to FER in tomato and is a regulator of iron uptake.; FER-like regulator of iron uptake (FRU); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of iron ion transport, response to cytokinin stimulus, response to iron ion, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G16910.1); Has 2366 Blast hits to 2362 proteins in 114 species: Archae - 2; Bacteria - 0; Metazoa - 3; Fungi - 9; Plants - 2350; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 450.0) & (original description: Putative FIT, Description = Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00690_293985-301599' '(at3g57800 : 211.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G42300.1); Has 2084 Blast hits to 2078 proteins in 112 species: Archae - 0; Bacteria - 2; Metazoa - 24; Fungi - 38; Plants - 2016; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative BHLH48, Description = Transcription factor bHLH48, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00698_202786-207354' '(at2g43010 : 149.0) Isolated as a semidominant mutation defective in red -light responses. Encodes a nuclear localized bHLH protein that interacts with active PhyB protein. Negatively regulates phyB mediated red light responses. Involved in shade avoidance response. Protein abundance is negatively regulated by PhyB.; phytochrome interacting factor 4 (PIF4); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome interacting factor 3-like 6 (TAIR:AT3G59060.1); Has 4535 Blast hits to 4529 proteins in 355 species: Archae - 0; Bacteria - 0; Metazoa - 936; Fungi - 188; Plants - 3370; Viruses - 2; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative bHLH7, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00723_155503-158520' '(at1g06150 : 612.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 7 (TAIR:AT2G31280.1). & (q76c99|rf1_orysa : 97.8) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1224.0) & (original description: Putative EMB1444, Description = Pentatricopeptide repeat-containing protein At1g06145, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00765_38646-42424' '(at2g31210 : 199.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G06170.2); Has 1830 Blast hits to 1818 proteins in 133 species: Archae - 2; Bacteria - 0; Metazoa - 18; Fungi - 11; Plants - 1605; Viruses - 5; Other Eukaryotes - 189 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative DTD, Description = AtbHLH89, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00821_854495-859117' '(at1g68920 : 246.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: cryptochrome-interacting basic-helix-loop-helix 5 (TAIR:AT1G26260.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative BHLH49, Description = Transcription factor bHLH49, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00893_15683-20400' '(at4g34530 : 173.0) Encodes a transcription factor CIB1 (cryptochrome-interacting basic-helix-loop-helix). CIB1 interacts with CRY2 (cryptochrome 2) in a blue light-specific manner in yeast and Arabidopsis cells, and it acts together with additional CIB1-related proteins to promote CRY2-dependent floral initiation. CIB1 positively regulates FT expression.; cryptochrome-interacting basic-helix-loop-helix 1 (CIB1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G68920.2); Has 2243 Blast hits to 2231 proteins in 129 species: Archae - 0; Bacteria - 9; Metazoa - 30; Fungi - 27; Plants - 2139; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative HBI1, Description = Transcription factor HBI1, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00961_104522-110976' '(at4g02590 : 208.0) unfertilized embryo sac 12 (UNE12); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G03040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 416.0) & (original description: Putative UNE12, Description = Transcription factor UNE12, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf00985_451258-455457' '(at2g42280 : 205.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 410.0) & (original description: Putative rau1, Description = Basic helix-loop-helix (BHLH) DNA-binding superfamily, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01005_158230-161321' '(at5g64340 : 94.7) Encodes a bHLH(basic helix-loop-helix)-type transcription factor SAC51 [suppressor of acaulis 51]. Upregulation of SAC51 reverses the dwarf phenotype caused by a loss-of-function mutation in ACL5 (Arabidopsis thaliana ACAULIS 5) gene, suggesting that activation of SAC51 may lead to the expression of a subset of genes required for stem elongation.; SUPPRESSOR OF ACAULIS 51 (SAC51); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;transcription regulators (TAIR:AT5G09460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01006_26903-30726' '(at1g01260 : 531.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ABA-inducible BHLH-type transcription factor (TAIR:AT2G46510.1). & (p13027|arrs_maize : 86.3) Anthocyanin regulatory R-S protein - Zea mays (Maize) & (reliability: 1062.0) & (original description: Putative BHLH13, Description = Transcription factor bHLH13, PFAM = PF00010;PF14215)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01102_619840-624969' '(at4g00870 : 227.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G16430.1); Has 3066 Blast hits to 2737 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 39; Plants - 2956; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative MYC1, Description = MYC1, PFAM = PF00010;PF14215)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01139_373745-378209' '(at1g72210 : 216.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G22490.1); Has 1596 Blast hits to 1587 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 30; Plants - 1534; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative BHLH96, Description = Transcription factor bHLH96, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01146_183103-187580' '(at3g24140 : 341.0) Encodes a basic helix-loop-helix transcription factor whose activity is required to promote differentiation of stomatal guard cells and to halt proliferative divisions in their immediate precursors. Both transcript and protein are expressed in and are required for halting divisions at the end of the stomatal lineage. It also has a role in the promotion of guard cell fate and in controlling the transition from guard mother cell to guard cell.; FAMA (FMA); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G72210.1); Has 1771 Blast hits to 1747 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 80; Plants - 1654; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 682.0) & (original description: Putative bHLH1, Description = Transcription factor bHLH96, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01171_820670-824931' '(at3g24140 : 333.0) Encodes a basic helix-loop-helix transcription factor whose activity is required to promote differentiation of stomatal guard cells and to halt proliferative divisions in their immediate precursors. Both transcript and protein are expressed in and are required for halting divisions at the end of the stomatal lineage. It also has a role in the promotion of guard cell fate and in controlling the transition from guard mother cell to guard cell.; FAMA (FMA); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G72210.1); Has 1771 Blast hits to 1747 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 80; Plants - 1654; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 666.0) & (original description: Putative FAMA, Description = FAMA(E), PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01253_13538-18102' '(at2g42280 : 215.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 430.0) & (original description: Putative rau1, Description = Basic helix-loop-helix (BHLH) DNA-binding superfamily, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01255_43792-47940' '(at3g06120 : 207.0) Encodes a basic helix-loop-helix (bHLH) protein that controls meristemoid differentiation during stomatal development. In the absence of MUTE, meristemoids abort after excessive asymmetric divisions and fail to differentiate stomata.; MUTE (MUTE); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G24140.1); Has 1269 Blast hits to 1254 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1269; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative MUTE, Description = Transcription factor MUTE, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01316_507460-511976' '(at5g65640 : 236.0) beta HLH protein 93 (bHLH093); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G10570.1); Has 2660 Blast hits to 2654 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 20; Plants - 2556; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative BHLH93, Description = Transcription factor bHLH93, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01350_424728-433098' '(at1g49770 : 171.0) Encodes a member of the basic helix loop helix family of transcription factors. Loss of RGE1 function causes shriveled seeds that contain small embryos. The cuticle in the embryos does not develop normally, possible due to the adeherence of the endosperm to the developing embryo. RGE1 is expressed in the endosperm surrounding region which directly surrounds the developing embryo, however it exerts its effect non autonomously- in the developing embryo. Mutant seedlings are extremely sensitive to dessication due to the abnormal cuticle.; RETARDED GROWTH OF EMBRYO 1 (RGE1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: embryo development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: endosperm; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22760.1); Has 1071 Blast hits to 1071 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 65; Fungi - 10; Plants - 987; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative BHLH95, Description = Transcription factor bHLH95, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01411_45658-48549' '(at1g74500 : 88.2) Encodes a basic helixñloopñhelix transcription factor that acts downstream of MP in root initiation. TMO7 protein moves to the hypophysis and to vascular cells, contributing to MP-dependent root formation. Promotes the correct definition of the hypophysis cell division plane.; activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1 (BS1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BANQUO 3 (TAIR:AT3G47710.1); Has 97 Blast hits to 97 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative PRE3, Description = Transcription factor PRE3, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01523_96358-102635' '(at2g27230 : 177.0) Encodes a nuclear-localized transcriptional activator with weak sequence similarity to basic helix-loop-helix(bHLH)-domain proteins. It promotes the production of stele cells in root meristems and is required to establish and maintain the normal vascular cell number and pattern in primary and lateral roots.; LONESOME HIGHWAY (LHW); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase WNK (With No Lysine)-related (TAIR:AT1G64625.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative LHW, Description = BHLH transcription factor-like protein, PFAM = PF14215)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01577_91436-96343' '(at1g59640 : 230.0) A basic helix-loop-helix encoding gene (BIGPETAL, BPE) involved in the control of petal size. BPE is expressed via two mRNAs derived from an alternative splicing event. The BPEub (AT1G59640.1)transcript is expressed ubiquitously, whereas the BPEp (AT1G59640.2) transcript is preferentially expressed in petals. Plants that lack the petal-expressed variant BPEp have larger petals as a result of increased cell size. BPEp is positively regulated downstream of APETALA3, PISTILLATA, APETALA1 and PISTILLATA3 and is negatively regulated downstream of AGAMOUS.; BIG PETAL P (BPEp); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: petal morphogenesis, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G62610.1); Has 2416 Blast hits to 2408 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 166; Fungi - 35; Plants - 2213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative BHLH79, Description = Transcription factor bHLH79, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01585_119330-122331' '(at1g30670 : 90.9) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G34820.1); Has 1015 Blast hits to 1013 proteins in 53 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 4; Plants - 1002; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative EN124, Description = Transcription factor bHLH52, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01700_245389-252157' '(at2g14760 : 155.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 (TAIR:AT4G33880.1). & (reliability: 310.0) & (original description: Putative BHLH84, Description = Transcription factor bHLH84, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01700_288997-293517' '(at2g14760 : 163.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 (TAIR:AT4G33880.1). & (reliability: 326.0) & (original description: Putative EN94, Description = Basic helix-loop-helix family protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01710_433281-437261' '(at2g40200 : 112.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G56770.1); Has 2073 Blast hits to 2066 proteins in 145 species: Archae - 0; Bacteria - 2; Metazoa - 255; Fungi - 6; Plants - 1802; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative EN56, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01819_477883-484236' '(at1g31050 : 148.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: sperm cell, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G61660.3); Has 358 Blast hits to 358 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 358; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative EN66, Description = Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 1, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01903_338400-341717' '(at2g40200 : 132.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G56770.1); Has 2073 Blast hits to 2066 proteins in 145 species: Archae - 0; Bacteria - 2; Metazoa - 255; Fungi - 6; Plants - 1802; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative EN57, Description = Basic helix-loop-helix DNA-binding superfamily protein, putative, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf01954_306463-309785' '(at4g00870 : 250.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G16430.1); Has 3066 Blast hits to 2737 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 39; Plants - 2956; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (p13027|arrs_maize : 83.6) Anthocyanin regulatory R-S protein - Zea mays (Maize) & (reliability: 500.0) & (original description: Putative BHLH14, Description = Transcription factor bHLH14, PFAM = PF14215;PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02004_61122-65396' '(at4g37850 : 175.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (p13027|arrs_maize : 80.5) Anthocyanin regulatory R-S protein - Zea mays (Maize) & (reliability: 350.0) & (original description: Putative bHLH, Description = BHLH transcription factor, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02044_491849-496407' '(at4g38070 : 251.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11940.1); Has 194780 Blast hits to 83936 proteins in 3334 species: Archae - 2743; Bacteria - 33979; Metazoa - 84944; Fungi - 15379; Plants - 11807; Viruses - 735; Other Eukaryotes - 45193 (source: NCBI BLink). & (gnl|cdd|35383 : 86.8) no description available & (reliability: 502.0) & (original description: Putative PGSC0003DMG400037454, Description = Uncharacterized protein At4g38062 family, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02073_305159-311189' '(at4g37850 : 87.8) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative , Description = , PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02172_406104-412066' '(at4g00050 : 134.0) unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative bHLH7, Description = Helix-loop-helix DNA-binding domain containing protein, expressed, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02216_264320-276287' '(at2g42280 : 187.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative rau1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02239_223731-230247' '(at1g35460 : 169.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G09180.1); Has 1965 Blast hits to 1959 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 1958; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative BHLH80, Description = Transcription factor bHLH80, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02262_223519-227993' '(at5g54680 : 253.0) iaa-leucine resistant3 (ILR3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative ILR3, Description = Transcription factor ILR3, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02289_188228-201606' '(at1g69010 : 139.0) BES1-interacting Myc-like protein 2 (BIM2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: dTDP-rhamnose biosynthetic process, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G08130.3); Has 2743 Blast hits to 2732 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 63; Plants - 2453; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative TCM_011433, Description = BES1-interacting Myc-like protein 2, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02398_22102-26874' '(at1g10610 : 235.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G16910.1); Has 1439 Blast hits to 1421 proteins in 116 species: Archae - 0; Bacteria - 21; Metazoa - 63; Fungi - 6; Plants - 1338; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 470.0) & (original description: Putative BnaA06g06490D, Description = BHLH transcription factor, PFAM = PF00010;PF14215)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02417_736716-850550' '(at4g37850 : 137.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative bHLH, Description = Transcription factor bHLH25, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02420_747118-759243' '(at4g25410 : 81.6) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G51790.1); Has 313 Blast hits to 313 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 8; Plants - 300; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative PGSC0003DMG400027959, Description = Basic helix-loop-helix DNA-binding superfamily protein, putative, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02420_832318-835958' '(at5g51790 : 113.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G25410.1); Has 302 Blast hits to 302 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 301; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative BnaA10g07750D, Description = Basic helix-loop-helix DNA-binding superfamily protein, putative, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02440_122-4787' '(at3g20640 : 165.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G61660.1); Has 3293 Blast hits to 1784 proteins in 150 species: Archae - 0; Bacteria - 39; Metazoa - 261; Fungi - 101; Plants - 1460; Viruses - 0; Other Eukaryotes - 1432 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative B70, Description = Ethylene-responsive family protein, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02459_794217-803254' '(at4g37850 : 90.1) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative , Description = DNA binding protein, putative, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02459_864581-871028' '(at4g37850 : 108.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative PGSC0003DMG400005101, Description = DNA binding protein, putative, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02631_458404-462761' '(at1g49770 : 94.0) Encodes a member of the basic helix loop helix family of transcription factors. Loss of RGE1 function causes shriveled seeds that contain small embryos. The cuticle in the embryos does not develop normally, possible due to the adeherence of the endosperm to the developing embryo. RGE1 is expressed in the endosperm surrounding region which directly surrounds the developing embryo, however it exerts its effect non autonomously- in the developing embryo. Mutant seedlings are extremely sensitive to dessication due to the abnormal cuticle.; RETARDED GROWTH OF EMBRYO 1 (RGE1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: embryo development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: endosperm; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22760.1); Has 1071 Blast hits to 1071 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 65; Fungi - 10; Plants - 987; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative PGSC0003DMG400025780, Description = Transcription factor bHLH95, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02756_70375-75263' '(at3g07340 : 174.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G48560.1); Has 2639 Blast hits to 2308 proteins in 133 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 52; Plants - 2177; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative ACE2, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02757_365229-371658' '(at5g57150 : 219.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G29930.3). & (reliability: 438.0) & (original description: Putative BHLH35, Description = Transcription factor bHLH35, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02761_71053-77444' '(at4g00050 : 103.0) unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative ALC, Description = Transcription factor PIF1, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02794_730487-732935' '(at5g54680 : 197.0) iaa-leucine resistant3 (ILR3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative bHLH2, Description = Transcription factor ILR3, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02821_1530685-1534816' '(at1g22490 : 191.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G72210.1); Has 1544 Blast hits to 1534 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 34; Plants - 1460; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative BHLH71, Description = Transcription factor bHLH71, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02915_417109-421234' '(at4g36540 : 142.0) BR enhanced expression 2 (BEE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G18300.1); Has 2103 Blast hits to 2095 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 34; Plants - 2033; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative ACE1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02955_97271-100724' '(at1g62975 : 115.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G12540.1); Has 533 Blast hits to 533 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 85; Fungi - 0; Plants - 445; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative RCOM_1498390, Description = DNA binding protein, putative, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf02955_259836-263167' '(at5g51790 : 129.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G25410.1); Has 302 Blast hits to 302 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 301; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative BHLH120, Description = Transcription factor bHLH120, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03047_120946-123719' '(at4g21330 : 122.0) Encodes a bHLH transcription factor strongly expressed in the tapetum from late anther stage 5 to early stage 6, and at a lower level in meiocytes. dyt1 mutant exhibits abnormal anther morphology beginning at anther stage 4. DYT1 acts downstream of SPL/NZZ and EMS1/EXS , and is required for normal expression of AMS, MS1 and other tapetum preferential genes.; DYSFUNCTIONAL TAPETUM 1 (DYT1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: tapetal layer development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: tapetum, floral meristem, anther primordium; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G16910.1); Has 1140 Blast hits to 1140 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 1137; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative DYT1, Description = Transcription factor DYT1, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03068_446112-449898' '(at5g65640 : 221.0) beta HLH protein 93 (bHLH093); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G10570.1); Has 2660 Blast hits to 2654 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 20; Plants - 2556; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative ICE4, Description = Inducer of CBF expression 4, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03070_115376-118089' '(at3g17100 : 127.0) sequence-specific DNA binding transcription factors; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G06590.2); Has 168 Blast hits to 168 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 166; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative AIF2, Description = ATBS1 interacting factor 2, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03105_131600-137250' '(at4g38070 : 214.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11940.1); Has 194780 Blast hits to 83936 proteins in 3334 species: Archae - 2743; Bacteria - 33979; Metazoa - 84944; Fungi - 15379; Plants - 11807; Viruses - 735; Other Eukaryotes - 45193 (source: NCBI BLink). & (gnl|cdd|35383 : 101.0) no description available & (reliability: 428.0) & (original description: Putative At4g38062, Description = Putative ovule protein, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03202_689205-696239' '(at5g01310 : 782.0) Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro.; APRATAXIN-like (APTX); FUNCTIONS IN: adenylylsulfatase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: sulfur metabolic process, purine ribonucleotide metabolic process, regulation of transcription; LOCATED IN: intracellular, nucleus, chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Appr-1-p processing (InterPro:IPR002589), Histidine triad (HIT) protein (InterPro:IPR001310), Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Histidine triad motif (InterPro:IPR011151), Helix-loop-helix DNA-binding (InterPro:IPR011598), Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G21330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37345 : 233.0) no description available & (reliability: 1564.0) & (original description: Putative APTX, Description = Aprataxin, putative, PFAM = PF01661;PF11969;PF13671)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03202_926709-929524' '(at5g01310 : 121.0) Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro.; APRATAXIN-like (APTX); FUNCTIONS IN: adenylylsulfatase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: sulfur metabolic process, purine ribonucleotide metabolic process, regulation of transcription; LOCATED IN: intracellular, nucleus, chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Appr-1-p processing (InterPro:IPR002589), Histidine triad (HIT) protein (InterPro:IPR001310), Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Histidine triad motif (InterPro:IPR011151), Helix-loop-helix DNA-binding (InterPro:IPR011598), Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G21330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7xaq6|lax_orysa : 111.0) Transcription factor LAX PANICLE - Oryza sativa (Rice) & (reliability: 242.0) & (original description: Putative HEC1, Description = Basic helix-loop-helix family protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03309_740778-744952' '(at1g68810 : 124.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix 32 (TAIR:AT3G25710.1); Has 3080 Blast hits to 3073 proteins in 197 species: Archae - 0; Bacteria - 9; Metazoa - 353; Fungi - 47; Plants - 2657; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative TCM_029711, Description = Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 2, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03421_421678-424767' '(at5g50010 : 104.0) sequence-specific DNA binding transcription factors;transcription regulators; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;transcription regulators (TAIR:AT5G64340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03455_176062-178790' '(at1g29950 : 100.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;transcription regulators (TAIR:AT5G50010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative EN130, Description = AtbHLH144, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03577_204842-209821' '(at3g07340 : 249.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G48560.1); Has 2639 Blast hits to 2308 proteins in 133 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 52; Plants - 2177; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative BHLH62, Description = Transcription factor bHLH62, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03596_64878-69023' '(at1g68810 : 116.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix 32 (TAIR:AT3G25710.1); Has 3080 Blast hits to 3073 proteins in 197 species: Archae - 0; Bacteria - 9; Metazoa - 353; Fungi - 47; Plants - 2657; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative Os01g0218100, Description = Basic helix-loop-helix (BHLH) DNA-binding superfamily, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03670_258174-262026' '(at3g56770 : 92.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G41130.1); Has 75 Blast hits to 75 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative , Description = , PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03882_88117-90905' '(at5g09750 : 138.0) HECATE 3 (HEC3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: transmitting tissue development, carpel formation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: stigma, transmitting tissue, funicle, septum, vascular system; EXPRESSED DURING: flower development stages, gynoecium developmental stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G00120.1); Has 2886 Blast hits to 2880 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 2841; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative EN94, Description = Transcription factor bHLH87, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03894_474285-477568' '(at4g00870 : 199.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G16430.1); Has 3066 Blast hits to 2737 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 39; Plants - 2956; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative MYC1, Description = MYC1, PFAM = PF00010;PF14215)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03934_556500-568042' '(at2g20180 : 119.0) Encodes a novel Myc-related bHLH transcription factor that has transcriptional activation activity in the dark. It is a key negative regulator of phytochrome-mediated seed germination and acts by inhibiting chlorophyll biosynthesis, light-mediated suppression of hypocotyl elongation and far-red light-mediated suppression of seed germination, and promoting negative gravitropism in hypocotyls. Light reduces this activity in a phy-dependent manner. The protein preferentially interacts with the Pfr forms of Phytochrome A (PhyA) and Phytochrome B (PhyB), is physically associated with APRR1/TOC1 and is degraded in red (R) and far-red (FR) light through the ubiquitin (ub)-26S proteasome pathway to optimize photomorphogenic development in Arabidopsis. It also negatively regulates GA3 oxidase expression.; phytochrome interacting factor 3-like 5 (PIL5); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G28800.1). & (reliability: 238.0) & (original description: Putative bHLH7, Description = Transcription factor PIF1, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf03948_324955-335186' '(at1g06150 : 406.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 7 (TAIR:AT2G31280.1). & (reliability: 812.0) & (original description: Putative F1N19, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF14215)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf04206_220987-231968' '(at2g20180 : 162.0) Encodes a novel Myc-related bHLH transcription factor that has transcriptional activation activity in the dark. It is a key negative regulator of phytochrome-mediated seed germination and acts by inhibiting chlorophyll biosynthesis, light-mediated suppression of hypocotyl elongation and far-red light-mediated suppression of seed germination, and promoting negative gravitropism in hypocotyls. Light reduces this activity in a phy-dependent manner. The protein preferentially interacts with the Pfr forms of Phytochrome A (PhyA) and Phytochrome B (PhyB), is physically associated with APRR1/TOC1 and is degraded in red (R) and far-red (FR) light through the ubiquitin (ub)-26S proteasome pathway to optimize photomorphogenic development in Arabidopsis. It also negatively regulates GA3 oxidase expression.; phytochrome interacting factor 3-like 5 (PIL5); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G28800.1). & (reliability: 324.0) & (original description: Putative bHLH7, Description = Transcription factor PIF1, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf04217_1155676-1158410' '(at5g08510 : 169.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G44230.1); Has 37926 Blast hits to 14003 proteins in 252 species: Archae - 2; Bacteria - 4; Metazoa - 48; Fungi - 107; Plants - 37187; Viruses - 0; Other Eukaryotes - 578 (source: NCBI BLink). & (reliability: 330.0) & (original description: Putative PGSC0003DMG400024200, Description = JMS10C05.1 protein, PFAM = PF13041)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf04283_680839-691731' '(at4g09820 : 235.0) TT8 is a regulation factor that acts in a concerted action with TT1, PAP1 and TTG1 on the regulation of flavonoid pathways, namely proanthocyanidin and anthocyanin biosynthesis. Affects dihydroflavonol 4-reductase gene expression. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. Also important for important for marginal trichome development.; TRANSPARENT TESTA 8 (TT8); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: trichome differentiation, regulation of flavonoid biosynthetic process, regulation of proanthocyanidin biosynthetic process; LOCATED IN: nucleus; EXPRESSED IN: stem, hypocotyl, micropylar endosperm; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G63650.3); Has 2828 Blast hits to 2555 proteins in 185 species: Archae - 0; Bacteria - 2; Metazoa - 59; Fungi - 73; Plants - 2682; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (p13027|arrs_maize : 146.0) Anthocyanin regulatory R-S protein - Zea mays (Maize) & (reliability: 470.0) & (original description: Putative an1, Description = Anthocyanin 1, PFAM = PF14215;PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf04287_209631-214227' '(at1g10610 : 226.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G16910.1); Has 1439 Blast hits to 1421 proteins in 116 species: Archae - 0; Bacteria - 21; Metazoa - 63; Fungi - 6; Plants - 1338; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative BnaA06g06490D, Description = BnaA06g06490D protein, PFAM = PF14215;PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf04316_230964-237472' '(at5g54680 : 241.0) iaa-leucine resistant3 (ILR3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative ILR3, Description = Transcription factor ILR3, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf04386_915102-920009' '(at1g51140 : 148.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G42280.1); Has 1835 Blast hits to 1829 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 5; Plants - 1818; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative rau1, Description = Transcription factor RAU1, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf04445_443947-452056' '(at1g06150 : 198.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 7 (TAIR:AT2G31280.1). & (reliability: 396.0) & (original description: Putative F1N19, Description = BHLH transcription factor-like protein, PFAM = PF14215)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf04455_88422-92161' '(at1g72210 : 236.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G22490.1); Has 1596 Blast hits to 1587 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 30; Plants - 1534; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative BHLH96, Description = Transcription factor bHLH96, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf04654_349282-352577' '(at3g62890 : 293.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G40405.1); Has 35241 Blast hits to 13566 proteins in 229 species: Archae - 0; Bacteria - 18; Metazoa - 37; Fungi - 30; Plants - 34726; Viruses - 0; Other Eukaryotes - 430 (source: NCBI BLink). & (reliability: 556.0) & (original description: Putative PGSC0003DMG400022163, Description = DAG kinase, PFAM = PF13041;PF13041;PF01535;PF12854)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf04657_598422-602516' '(at2g14760 : 155.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 (TAIR:AT4G33880.1). & (reliability: 310.0) & (original description: Putative BHLH84, Description = Transcription factor bHLH84, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf04686_265263-269902' '(at1g68810 : 120.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix 32 (TAIR:AT3G25710.1); Has 3080 Blast hits to 3073 proteins in 197 species: Archae - 0; Bacteria - 9; Metazoa - 353; Fungi - 47; Plants - 2657; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative MTR_5g032375, Description = Helix loop helix DNA-binding domain protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf04933_266489-274161' '(at5g56960 : 201.0) basic helix-loop-helix (bHLH) DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G57150.4); Has 2180 Blast hits to 2174 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 44; Plants - 1927; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative PGSC0003DMG400022043, Description = Basic helix-loop-helix DNA-binding family protein, putative, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf04995_561066-564077' '(at3g50330 : 125.0) HECATE 2 (HEC2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ovary septum development, transmitting tissue development, carpel formation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: flower development stages, gynoecium developmental stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G67060.1); Has 2920 Blast hits to 2914 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2920; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative bHLH113, Description = BHLH transcription factor, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf05115_293532-300461' '(at2g42300 : 185.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G57800.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 370.0) & (original description: Putative BHLH48, Description = Transcription factor bHLH48, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf05175_216111-246233' '(at1g68810 : 203.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix 32 (TAIR:AT3G25710.1); Has 3080 Blast hits to 3073 proteins in 197 species: Archae - 0; Bacteria - 9; Metazoa - 353; Fungi - 47; Plants - 2657; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 406.0) & (original description: Putative EN53, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf05371_35699-39895' '(at4g00870 : 208.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G16430.1); Has 3066 Blast hits to 2737 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 39; Plants - 2956; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 416.0) & (original description: Putative myc2, Description = Transcription factor MYC2, PFAM = PF00010;PF14215;PF14215)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf05413_497055-502837' '(at3g20640 : 176.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G61660.1); Has 3293 Blast hits to 1784 proteins in 150 species: Archae - 0; Bacteria - 39; Metazoa - 261; Fungi - 101; Plants - 1460; Viruses - 0; Other Eukaryotes - 1432 (source: NCBI BLink). & (reliability: 330.0) & (original description: Putative Os04g0493100, Description = OJ990528_30.9 protein, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf05417_335300-341341' '(at4g37850 : 116.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative PGSC0003DMG400005101, Description = DNA binding protein, putative, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf05458_97915-101372' '(at1g50270 : 301.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT2G13600.1); Has 37475 Blast hits to 13706 proteins in 234 species: Archae - 0; Bacteria - 8; Metazoa - 62; Fungi - 67; Plants - 36828; Viruses - 0; Other Eukaryotes - 510 (source: NCBI BLink). & (q76c99|rf1_orysa : 80.9) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 542.0) & (original description: Putative PGSC0003DMG400008944, Description = Putative uncharacterized protein Sb06g020256, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf05483_16356-19658' '(at1g06170 : 156.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G31220.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative DTD, Description = Transcription factor bHLH91, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf05483_16385-20099' '(at1g06170 : 152.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G31220.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative DTD, Description = Transcription factor bHLH91, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf05612_127711-136211' '(at1g06150 : 239.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 7 (TAIR:AT2G31280.1). & (reliability: 478.0) & (original description: Putative F1N19, Description = BHLH transcription factor-like protein, PFAM = PF14215)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf05713_385388-388247' '(at4g20970 : 111.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response to fungus, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G10586.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative MTR_2g013920, Description = Helix loop helix DNA-binding domain protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf05713_389056-392847' '(at4g20970 : 130.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response to fungus, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G10586.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative At4g20970, Description = Basic helix-loop-helix domain-containing protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf05912_135009-141962' '(at3g26744 : 329.0) Encodes a MYC-like bHLH transcriptional activator that binds specifically to the MYC recognition sequences in the CBF3 promoter. Mutants are defective in cold-regulated gene expression. Cold stress triggers protein degradation of nuclear GFPICE1 protein, and the RING finger protein HOS1 is required. Sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance.; INDUCER OF CBF EXPRESSION 1 (ICE1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G12860.1); Has 2623 Blast hits to 2616 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 30; Plants - 2572; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 658.0) & (original description: Putative SCRM2, Description = Transcription factor SCREAM2, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf06009_90378-99592' '(at4g00050 : 127.0) unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative bHLH7, Description = Helix-loop-helix DNA-binding domain containing protein, expressed, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf06094_182337-193698' '(at5g54680 : 218.0) iaa-leucine resistant3 (ILR3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative bHLH2, Description = BHLH transcriptional factor, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf06113_79404-85711' '(at5g54680 : 211.0) iaa-leucine resistant3 (ILR3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative TIDP3430, Description = BHLH transcription factor, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf06248_271911-275332' '(at4g16430 : 447.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ABA-inducible BHLH-type transcription factor (TAIR:AT2G46510.1); Has 2977 Blast hits to 2635 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 85; Fungi - 31; Plants - 2859; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 894.0) & (original description: Putative BHLH3, Description = Transcription factor bHLH3, PFAM = PF14215;PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf06467_187803-191625' '(at1g27740 : 108.0) Basic helix-loop-helix (bHLH) transcription factor that is sufficient to promote postmitotic cell growth in root-hair cells. RSL4 is a direct transcriptional target of RHD6; root hair defective 6-like 4 (RSL4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root hair initiation, response to auxin stimulus, positive regulation of transcription, cell growth, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: trichoblast, root; EXPRESSED DURING: 5 root hair formation; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G43175.1); Has 2802 Blast hits to 2796 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 24; Plants - 2776; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative LRL2, Description = Helix-loop-helix DNA-binding domain containing protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf06516_32929-35999' '(at5g09460 : 97.4) sequence-specific DNA binding transcription factors;transcription regulators; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;transcription regulators (TAIR:AT5G64340.1); Has 178 Blast hits to 178 proteins in 26 species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 1; Plants - 159; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 194.8) & (original description: Putative)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf06618_145487-149860' '(at3g21330 : 199.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G00120.1); Has 2796 Blast hits to 2791 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 6; Plants - 2786; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative BHLH87, Description = Transcription factor bHLH87, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf06621_194689-203323' '(at3g26744 : 326.0) Encodes a MYC-like bHLH transcriptional activator that binds specifically to the MYC recognition sequences in the CBF3 promoter. Mutants are defective in cold-regulated gene expression. Cold stress triggers protein degradation of nuclear GFPICE1 protein, and the RING finger protein HOS1 is required. Sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance.; INDUCER OF CBF EXPRESSION 1 (ICE1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G12860.1); Has 2623 Blast hits to 2616 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 30; Plants - 2572; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 652.0) & (original description: Putative SCRM, Description = Transcription factor ICE1, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf06623_107740-112896' '(at1g25330 : 174.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BR enhanced expression 1 (TAIR:AT1G18400.1); Has 2000 Blast hits to 1994 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 45; Plants - 1913; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative BnaC02g22470D, Description = BnaC02g22470D protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf06860_1970-5511' '(at5g65640 : 237.0) beta HLH protein 93 (bHLH093); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G10570.1); Has 2660 Blast hits to 2654 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 20; Plants - 2556; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 474.0) & (original description: Putative bHLH2, Description = Inducer of CBF expression 1, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf06872_164438-167944' '(at4g37850 : 135.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative bHLH, Description = Transcription factor bHLH25, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf06872_259360-262654' '(at4g37850 : 141.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative bHLH, Description = Transcription factor bHLH25, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf06939_546097-549902' '(at1g72210 : 225.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G22490.1); Has 1596 Blast hits to 1587 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 30; Plants - 1534; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 450.0) & (original description: Putative bHLH1, Description = Basic helix loop helix (BHLH) DNA-binding family protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf07073_512924-517313' '(at5g65640 : 243.0) beta HLH protein 93 (bHLH093); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G10570.1); Has 2660 Blast hits to 2654 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 20; Plants - 2556; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative BHLH93, Description = Transcription factor bHLH93, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf07105_32109-39259' '(at1g06150 : 400.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 7 (TAIR:AT2G31280.1). & (reliability: 800.0) & (original description: Putative F1N19, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF14215)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf07829_446915-451347' '(at3g47640 : 118.0) Encodes POPEYE (PYE), a bHLH transcription factor regulating response to iron deficiency in Arabidopsis roots.; POPEYE (PYE); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to iron ion starvation, iron ion homeostasis, regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G36060.1). & (reliability: 236.0) & (original description: Putative BHLH47, Description = Transcription factor bHLH47, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf07919_1896-6400' '(at1g68920 : 278.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: cryptochrome-interacting basic-helix-loop-helix 5 (TAIR:AT1G26260.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 556.0) & (original description: Putative BHLH49, Description = Transcription factor bHLH49, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf08001_242524-246058' '(at2g14760 : 153.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 (TAIR:AT4G33880.1). & (reliability: 306.0) & (original description: Putative BHLH84, Description = Transcription factor bHLH84, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf08006_216303-221599' '(at3g07340 : 204.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G48560.1); Has 2639 Blast hits to 2308 proteins in 133 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 52; Plants - 2177; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative BHLH62, Description = Transcription factor bHLH62, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf08127_108370-117638' '(at1g69010 : 248.0) BES1-interacting Myc-like protein 2 (BIM2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: dTDP-rhamnose biosynthetic process, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G08130.3); Has 2743 Blast hits to 2732 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 63; Plants - 2453; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 496.0) & (original description: Putative BIM2, Description = BES1-interacting Myc-like protein 2, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf08298_303134-314263' '(at2g20180 : 182.0) Encodes a novel Myc-related bHLH transcription factor that has transcriptional activation activity in the dark. It is a key negative regulator of phytochrome-mediated seed germination and acts by inhibiting chlorophyll biosynthesis, light-mediated suppression of hypocotyl elongation and far-red light-mediated suppression of seed germination, and promoting negative gravitropism in hypocotyls. Light reduces this activity in a phy-dependent manner. The protein preferentially interacts with the Pfr forms of Phytochrome A (PhyA) and Phytochrome B (PhyB), is physically associated with APRR1/TOC1 and is degraded in red (R) and far-red (FR) light through the ubiquitin (ub)-26S proteasome pathway to optimize photomorphogenic development in Arabidopsis. It also negatively regulates GA3 oxidase expression.; phytochrome interacting factor 3-like 5 (PIL5); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G28800.1). & (reliability: 364.0) & (original description: Putative PIF1, Description = Transcription factor PIF1, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf08333_68260-75371' '(at3g56970 : 143.0) Encodes a member of the basic helix-loop-helix transcription factor family protein.; BHLH038; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Achaete-scute transcription factor related (InterPro:IPR015660), Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G56980.1); Has 474 Blast hits to 474 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 91; Fungi - 14; Plants - 368; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative BnaA07g17110D, Description = BnaA07g17110D protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf08333_68263-71334' '(at3g56970 : 139.0) Encodes a member of the basic helix-loop-helix transcription factor family protein.; BHLH038; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Achaete-scute transcription factor related (InterPro:IPR015660), Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G56980.1); Has 474 Blast hits to 474 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 91; Fungi - 14; Plants - 368; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative EN10, Description = Transcription factor ORG2, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf08394_109459-125056' '(at1g69010 : 252.0) BES1-interacting Myc-like protein 2 (BIM2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: dTDP-rhamnose biosynthetic process, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G08130.3); Has 2743 Blast hits to 2732 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 63; Plants - 2453; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 504.0) & (original description: Putative BIM2, Description = Transcription factor BIM2, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf08573_50801-54560' '(at4g25410 : 114.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G51790.1); Has 313 Blast hits to 313 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 8; Plants - 300; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative PGSC0003DMG400010526, Description = Transcription factor bHLH120 family, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf08672_274689-279731' '(at1g32640 : 509.0) Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif. Its transcription is induced by dehydration stress and ABA treatment. Negative regulator of blue lightñmediated photomorphogenic growth and blue and far-red-lightñregulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression.; MYC2; FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 13 processes; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: Basic helix-loop-helix (bHLH) DNA-binding family protein (TAIR:AT4G17880.1); Has 4078 Blast hits to 3762 proteins in 672 species: Archae - 2; Bacteria - 2; Metazoa - 761; Fungi - 108; Plants - 3150; Viruses - 25; Other Eukaryotes - 30 (source: NCBI BLink). & (p13526|arlc_maize : 94.7) Anthocyanin regulatory Lc protein - Zea mays (Maize) & (reliability: 946.0) & (original description: Putative myc2, Description = MYC2, PFAM = PF00010;PF14215)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf09368_266995-270816' '(at1g72210 : 234.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G22490.1); Has 1596 Blast hits to 1587 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 30; Plants - 1534; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative BHLH96, Description = Transcription factor bHLH96, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf09861_179462-183709' '(at1g66470 : 171.0) ROOT HAIR DEFECTIVE6 (RHD6); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: RHD SIX-LIKE 1 (TAIR:AT5G37800.1); Has 2452 Blast hits to 2438 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 23; Fungi - 2; Plants - 2416; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative EN95, Description = Basic helix-loop-helix family protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf10031_257993-261537' '(at2g41130 : 188.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast envelope; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G56770.1); Has 912 Blast hits to 912 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 26; Plants - 873; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative EN53, Description = Basic helix-loop-helix (BHLH) DNA-binding superfamily, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf10241_13769-17300' '(at2g28160 : 219.0) Encodes a putative transcription factor that regulates iron uptake responses. mRNA is detected in the outer cell layers of the root and accumulates in response to iron deficiency. The expression of many iron-regulated genes is dependent on FIT1. It specifically regulates FRO2 at the level of mRNA accumulation and IRT1 at the level of protein accumulation.Similar to FER in tomato and is a regulator of iron uptake.; FER-like regulator of iron uptake (FRU); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of iron ion transport, response to cytokinin stimulus, response to iron ion, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G16910.1); Has 2366 Blast hits to 2362 proteins in 114 species: Archae - 2; Bacteria - 0; Metazoa - 3; Fungi - 9; Plants - 2350; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative FIT, Description = Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf11491_120542-124074' '(at1g73830 : 173.0) BR enhanced expression 3 (BEE3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BR enhanced expression 1 (TAIR:AT1G18400.1). & (reliability: 346.0) & (original description: Putative ACE1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf11531_21322-26538' '(at1g68920 : 286.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: cryptochrome-interacting basic-helix-loop-helix 5 (TAIR:AT1G26260.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 572.0) & (original description: Putative ACE1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf11689_12254-21555' '(at5g41315 : 456.0) encodes a basic helix loop helix domain protein that interacts with GL1 in trichome development.; GLABROUS 3 (GL3); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G63650.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p13526|arlc_maize : 220.0) Anthocyanin regulatory Lc protein - Zea mays (Maize) & (reliability: 912.0) & (original description: Putative GL3, Description = Transcription factor GLABRA 3, PFAM = PF00010;PF14215)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf12293_104871-113881' '(at3g19860 : 209.0) basic Helix-Loop-Helix 121 (bHLH121); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G36060.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 418.0) & (original description: Putative BHLH11, Description = Transcription factor bHLH11, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf13099_12573-20450' '(at3g24140 : 235.0) Encodes a basic helix-loop-helix transcription factor whose activity is required to promote differentiation of stomatal guard cells and to halt proliferative divisions in their immediate precursors. Both transcript and protein are expressed in and are required for halting divisions at the end of the stomatal lineage. It also has a role in the promotion of guard cell fate and in controlling the transition from guard mother cell to guard cell.; FAMA (FMA); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G72210.1); Has 1771 Blast hits to 1747 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 80; Plants - 1654; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 470.0) & (original description: Putative MUTE, Description = Transcription factor MUTE, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf13886_158903-163798' '(at4g36540 : 141.0) BR enhanced expression 2 (BEE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G18300.1); Has 2103 Blast hits to 2095 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 34; Plants - 2033; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative ACE1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf13942_108011-112579' '(at1g51140 : 149.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G42280.1); Has 1835 Blast hits to 1829 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 5; Plants - 1818; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative rau1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf14344_68668-77936' '(at3g57800 : 212.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G42300.1); Has 2084 Blast hits to 2078 proteins in 112 species: Archae - 0; Bacteria - 2; Metazoa - 24; Fungi - 38; Plants - 2016; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 424.0) & (original description: Putative BHLH48, Description = Transcription factor bHLH48, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf14843_144486-149296' '(at1g10120 : 200.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G68920.2); Has 2297 Blast hits to 2289 proteins in 121 species: Archae - 0; Bacteria - 2; Metazoa - 55; Fungi - 29; Plants - 2202; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 400.0) & (original description: Putative ACE1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf14882_157604-161541' '(at5g43650 : 112.0) BHLH92; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G09820.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative WIN4, Description = Basic helix-loop-helix protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf16706_123444-131649' '(at2g24260 : 181.0) Encodes a basic helix-loop-helix (bHLH) protein that regulates root hair development. One of the three Arabidopsis homologs of the Lotus japonicus ROOTHAIRLESS1 (LjRHL1) gene: At2g24260 (AtLRL1), At4g30980 (AtLRL2), and At5g58010 (AtLRL3).; LJRHL1-like 1 (LRL1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root hair cell development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: LJRHL1-like 2 (TAIR:AT4G30980.1); Has 3384 Blast hits to 3378 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 150; Fungi - 13; Plants - 3219; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative rau1, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf16888_55925-61890' '(at3g19860 : 221.0) basic Helix-Loop-Helix 121 (bHLH121); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G36060.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative BHLH11, Description = Transcription factor bHLH11, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf17051_26026-28958' '(at4g21330 : 117.0) Encodes a bHLH transcription factor strongly expressed in the tapetum from late anther stage 5 to early stage 6, and at a lower level in meiocytes. dyt1 mutant exhibits abnormal anther morphology beginning at anther stage 4. DYT1 acts downstream of SPL/NZZ and EMS1/EXS , and is required for normal expression of AMS, MS1 and other tapetum preferential genes.; DYSFUNCTIONAL TAPETUM 1 (DYT1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: tapetal layer development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: tapetum, floral meristem, anther primordium; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G16910.1); Has 1140 Blast hits to 1140 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 1137; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative RERJ1, Description = OSJNBb0018A10.7 protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf18898_163988-168373' '(at1g06170 : 174.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G31220.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative DTD, Description = AtbHLH10, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf19439_7504-11845' '(at5g51790 : 87.8) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G25410.1); Has 302 Blast hits to 302 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 301; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative PGSC0003DMG400007559, Description = Basic helix-loop-helix transcription factor, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf22360_19139-22713' '(at1g72210 : 206.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G22490.1); Has 1596 Blast hits to 1587 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 30; Plants - 1534; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative bHLH1, Description = Transcription factor bHLH96, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf23305_167152-172399' '(at3g50330 : 128.0) HECATE 2 (HEC2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ovary septum development, transmitting tissue development, carpel formation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: flower development stages, gynoecium developmental stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G67060.1); Has 2920 Blast hits to 2914 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2920; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative HEC1, Description = Transcription factor bHLH87, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf24249_42803-47039' '(at3g47640 : 118.0) Encodes POPEYE (PYE), a bHLH transcription factor regulating response to iron deficiency in Arabidopsis roots.; POPEYE (PYE); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to iron ion starvation, iron ion homeostasis, regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G36060.1). & (reliability: 236.0) & (original description: Putative BHLH15, Description = BHLH domain class transcription factor, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf27908_177338-181997' '(at1g61660 : 138.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G20640.1). & (reliability: 276.0) & (original description: Putative ACT1, Description = Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 1, PFAM = )' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf32603_15437-23701' '(at3g57800 : 203.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G42300.1); Has 2084 Blast hits to 2078 proteins in 112 species: Archae - 0; Bacteria - 2; Metazoa - 24; Fungi - 38; Plants - 2016; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 406.0) & (original description: Putative BHLH48, Description = Transcription factor bHLH48, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf34081_44680-48071' '(at4g36540 : 166.0) BR enhanced expression 2 (BEE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G18300.1); Has 2103 Blast hits to 2095 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 34; Plants - 2033; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative BnaA09g09600D, Description = BnaA09g09600D protein, PFAM = PF00010)' T '27.3.6' 'RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family' 'niben101scf37335_55654-60077' '(at3g47640 : 117.0) Encodes POPEYE (PYE), a bHLH transcription factor regulating response to iron deficiency in Arabidopsis roots.; POPEYE (PYE); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to iron ion starvation, iron ion homeostasis, regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G36060.1). & (reliability: 234.0) & (original description: Putative At3g47640, Description = DNA-binding protein, PFAM = )' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'nbv0.3scaffold43494_10047-15650' '(at1g04500 : 157.0) CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT2G33350.2); Has 1789 Blast hits to 1789 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 2; Plants - 1654; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|87043 : 80.2) no description available & (reliability: 290.0) & (original description: Putative ASL2, Description = CCT motif family protein, PFAM = PF06203)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'nbv0.3scaffold43494_10267-15169' '(at1g04500 : 157.0) CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT2G33350.2); Has 1789 Blast hits to 1789 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 2; Plants - 1654; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|87043 : 83.3) no description available & (reliability: 308.0) & (original description: Putative ASL2, Description = CCT motif family protein, PFAM = PF06203)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'nbv0.3scaffold59393_5761-11702' '(at1g28050 : 281.0) B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT2G33500.2); Has 3090 Blast hits to 2261 proteins in 129 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 2990; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (reliability: 562.0) & (original description: Putative COL14, Description = Zinc finger protein CONSTANS-LIKE 14, PFAM = PF06203;PF00643)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'nbv0.3scaffold63313_2730-5525' '(at4g27310 : 103.0) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT5G54470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative COL1, Description = B-box type zinc finger family protein, putative, PFAM = PF00643)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'nbv0.5scaffold169_756857-759674' '(at4g27310 : 119.0) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT5G54470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative BnaA02g09600D, Description = BnaA02g09600D protein, PFAM = PF00643)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'nbv0.5scaffold1064_39054-45567' '(at1g68190 : 127.0) B-box zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: CONSTANS-like 9 (TAIR:AT3G07650.4); Has 1632 Blast hits to 1343 proteins in 109 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 1580; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative BBX8, Description = Zinc finger constans-like protein, PFAM = )' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'nbv0.5scaffold1967_364923-368601' '(at4g27310 : 99.0) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT5G54470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative COL1, Description = COL domain class transcription factor, PFAM = PF00643)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben044scf00003483ctg005_442-5356' '(at1g04500 : 172.0) CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT2G33350.2); Has 1789 Blast hits to 1789 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 2; Plants - 1654; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|87043 : 84.9) no description available & (reliability: 326.0) & (original description: Putative COL9, Description = CCT motif family protein, PFAM = PF06203)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben044scf00009241ctg007_1759-4576' '(at5g54470 : 119.0) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: response to cold, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT4G27310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative BnaA02g09600D, Description = BnaA02g09600D protein, PFAM = PF00643)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben044scf00016388ctg011_42010-45525' '(at1g78600 : 146.0) light-regulated zinc finger protein 1 (LZF1); CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT1G06040.1). & (reliability: 292.0) & (original description: Putative BBX22, Description = B-box-type zinc finger protein 22, PFAM = )' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben044scf00019179ctg002_1-2343' '(at3g07650 : 210.0) This gene belongs to the CO (CONSTANS) gene family. This gene family is divided in three subgroups: groups III, to which COL9 belongs, is characterised by one B-box (supposed to regulate protein-protein interactions) and a second diverged zinc finger. COL9 downregulates expression of CO (CONSTANS) as well as FT and SOC1 which are known regulatory targets of CO.; CONSTANS-like 9 (COL9); CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT5G48250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 420.0) & (original description: Putative BBX8, Description = C2C2-CO-like transcription factor, PFAM = )' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben044scf00021336ctg000_3208-6994' '(at4g27310 : 99.8) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT5G54470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 199.6) & (original description: Putative COL3, Description = COL domain class transcription factor, PFAM = PF00643)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben044scf00025899ctg025_31289-33391' '(at5g54470 : 117.0) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: response to cold, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT4G27310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative COL1, Description = COL domain class transcription factor, PFAM = PF00643)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben044scf00035268ctg000_15047-20928' '(at1g68190 : 180.0) B-box zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: CONSTANS-like 9 (TAIR:AT3G07650.4); Has 1632 Blast hits to 1343 proteins in 109 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 1580; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative BBX8, Description = B-box zinc finger family protein, putative isoform 2, PFAM = )' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf00116_555718-558498' '(at4g27310 : 119.0) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT5G54470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative BnaA02g09600D, Description = BnaA02g09600D protein, PFAM = PF00643)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf00152_11864-15720' '(at1g75540 : 218.0) salt tolerance homolog2 (STH2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT4G39070.1); Has 3177 Blast hits to 2249 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 43; Plants - 2068; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative BBX20, Description = B-box zinc finger protein 20, PFAM = PF00643;PF00643)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf00577_1262140-1266181' '(at1g25440 : 286.0) B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G68520.1); Has 3476 Blast hits to 2333 proteins in 129 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 3380; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (reliability: 572.0) & (original description: Putative COL16, Description = Zinc finger protein CONSTANS-LIKE 16, PFAM = PF00643;PF06203)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf00679_128285-130638' '(at3g21890 : 81.6) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: response to UV-B, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT4G15248.1); Has 1422 Blast hits to 1146 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1410; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative BnaC01g42110D, Description = BnaC01g42110D protein, PFAM = )' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf00725_181159-185384' '(at1g68520 : 234.0) B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G25440.1); Has 3472 Blast hits to 2352 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 1; Plants - 3365; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative COL7, Description = Zinc finger protein CONSTANS-LIKE 7, PFAM = PF00643;PF06203)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf00753_374288-378780' '(at1g25440 : 280.0) B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G68520.1); Has 3476 Blast hits to 2333 proteins in 129 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 3380; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative CIA2, Description = CCT domain-containing protein, PFAM = PF00643;PF06203)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf00823_124804-130193' '(at2g47890 : 241.0) B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: stem, inflorescence meristem, root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G28050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative COL13, Description = Zinc finger protein CONSTANS-LIKE 13, PFAM = PF00643;PF06203)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf01017_656385-661299' '(at1g04500 : 171.0) CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT2G33350.2); Has 1789 Blast hits to 1789 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 2; Plants - 1654; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|87043 : 85.3) no description available & (reliability: 332.0) & (original description: Putative COL9, Description = CCT motif family protein, PFAM = PF06203)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf01409_639724-643297' '(at5g57660 : 288.0) CONSTANS-like 5 (COL5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: CONSTANS-like 4 (TAIR:AT5G24930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87043 : 85.6) no description available & (reliability: 576.0) & (original description: Putative COL5, Description = Zinc finger protein CONSTANS-LIKE 5, PFAM = PF06203;PF00643)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf01433_940199-943975' '(at4g38960 : 202.0) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT2G21320.1). & (reliability: 404.0) & (original description: Putative BBX19, Description = B-box zinc finger protein 19, PFAM = PF00643;PF00643)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf01983_934624-941083' '(at1g78600 : 276.0) light-regulated zinc finger protein 1 (LZF1); CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT1G06040.1). & (reliability: 552.0) & (original description: Putative BBX22, Description = B-box zinc finger protein 22, PFAM = PF00643)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf02210_308786-314727' '(at1g28050 : 280.0) B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT2G33500.2); Has 3090 Blast hits to 2261 proteins in 129 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 2990; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative COL15, Description = Zinc finger protein CONSTANS-LIKE 15, PFAM = PF06203;PF00643)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf02594_1045351-1049143' '(at1g75540 : 221.0) salt tolerance homolog2 (STH2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT4G39070.1); Has 3177 Blast hits to 2249 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 43; Plants - 2068; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative BBX21, Description = B-box zinc finger protein 21, PFAM = PF00643;PF00643)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf02778_458735-462413' '(at4g27310 : 99.8) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT5G54470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 199.6) & (original description: Putative BnaC09g30830D, Description = BnaC09g30830D protein, PFAM = PF00643)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf02794_171440-173811' '(at3g21890 : 89.7) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: response to UV-B, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT4G15248.1); Has 1422 Blast hits to 1146 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1410; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative PGSC0003DMG400026169, Description = B-box type zinc finger family protein, putative, PFAM = )' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf03506_312447-318366' '(at3g07650 : 261.0) This gene belongs to the CO (CONSTANS) gene family. This gene family is divided in three subgroups: groups III, to which COL9 belongs, is characterised by one B-box (supposed to regulate protein-protein interactions) and a second diverged zinc finger. COL9 downregulates expression of CO (CONSTANS) as well as FT and SOC1 which are known regulatory targets of CO.; CONSTANS-like 9 (COL9); CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT5G48250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 522.0) & (original description: Putative BBX8, Description = C2C2-CO-like transcription factor, PFAM = PF06203)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf03555_369120-374807' '(at5g48250 : 313.0) B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: CONSTANS-like 9 (TAIR:AT3G07650.4); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 626.0) & (original description: Putative BBX8, Description = B-box-type zinc-finger protein, PFAM = PF06203)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf03929_628646-631333' '(at4g27310 : 105.0) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT5G54470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative COL1, Description = B-box type zinc finger family protein, putative, PFAM = PF00643)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf04109_774667-780447' '(at1g68190 : 125.0) B-box zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: CONSTANS-like 9 (TAIR:AT3G07650.4); Has 1632 Blast hits to 1343 proteins in 109 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 1580; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative BBX8, Description = B-box type zinc finger protein with CCT domain isoform 1, PFAM = )' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf04122_6193-11284' '(at4g27310 : 119.0) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT5G54470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative COL16, Description = COL domain class transcription factor, PFAM = PF00643)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf04528_606528-621541' '(at1g78600 : 254.0) light-regulated zinc finger protein 1 (LZF1); CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT1G06040.1). & (reliability: 508.0) & (original description: Putative BBX22, Description = B-box zinc finger protein 22, PFAM = PF00643)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf04629_81839-85714' '(at1g75540 : 224.0) salt tolerance homolog2 (STH2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT4G39070.1); Has 3177 Blast hits to 2249 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 43; Plants - 2068; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative BBX21, Description = B-box zinc finger protein 21, PFAM = PF00643;PF00643)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf04664_103543-113959' '(at4g38960 : 227.0) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT2G21320.1). & (reliability: 454.0) & (original description: Putative BBX19, Description = B-box zinc finger protein 19, PFAM = PF00643;PF00643)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf04664_426377-431632' '(at1g75540 : 201.0) salt tolerance homolog2 (STH2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT4G39070.1); Has 3177 Blast hits to 2249 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 43; Plants - 2068; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative BnaC01g00140D, Description = BnaC01g00140D protein, PFAM = PF00643;PF00643)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf05108_238295-244246' '(at5g48250 : 319.0) B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: CONSTANS-like 9 (TAIR:AT3G07650.4); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 638.0) & (original description: Putative COL9, Description = Zinc finger protein CONSTANS-LIKE 9, PFAM = PF06203)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf05311_217209-224517' '(at1g06040 : 225.0) Encodes salt tolerance protein (STO) which confers salt tolerance to yeast cells. Fully complements calcineurin deficient yeast but does not encode a phosphoprotein phosphatase. Sequence has similarities to CONSTANS. STO co-localizes with COP1 and plays a role in light signaling.; SALT TOLERANCE (STO); CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: salt tolerance homologue (TAIR:AT2G31380.1); Has 1915 Blast hits to 1323 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 1814; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (reliability: 450.0) & (original description: Putative BBX24, Description = B-box zinc finger protein 24, PFAM = PF00643)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf06454_291933-295146' '(at5g24930 : 291.0) CONSTANS-like 4 (COL4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: CONSTANS-like 3 (TAIR:AT2G24790.1); Has 3148 Blast hits to 2480 proteins in 140 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 0; Plants - 2958; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|87043 : 82.6) no description available & (reliability: 582.0) & (original description: Putative COL4, Description = Zinc finger protein CONSTANS-LIKE 4, PFAM = PF06203;PF00643)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf10423_275269-279386' '(at3g21880 : 276.0) B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT4G15250.1); Has 2815 Blast hits to 2182 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 2726; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 552.0) & (original description: Putative COL12, Description = Zinc finger protein CONSTANS-LIKE 12, PFAM = PF06203)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf14973_170935-177632' '(at1g68190 : 177.0) B-box zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: CONSTANS-like 9 (TAIR:AT3G07650.4); Has 1632 Blast hits to 1343 proteins in 109 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 1580; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative COL1, Description = Zinc finger constans-like protein, PFAM = )' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf16585_327087-349633' '(at1g78600 : 265.0) light-regulated zinc finger protein 1 (LZF1); CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT1G06040.1). & (reliability: 530.0) & (original description: Putative BBX22, Description = B-box zinc finger protein 22, PFAM = PF00643)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf18577_111147-117526' '(at3g07650 : 303.0) This gene belongs to the CO (CONSTANS) gene family. This gene family is divided in three subgroups: groups III, to which COL9 belongs, is characterised by one B-box (supposed to regulate protein-protein interactions) and a second diverged zinc finger. COL9 downregulates expression of CO (CONSTANS) as well as FT and SOC1 which are known regulatory targets of CO.; CONSTANS-like 9 (COL9); CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT5G48250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 606.0) & (original description: Putative COL9, Description = Zinc finger protein CONSTANS-LIKE 9, PFAM = PF06203)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf19155_42157-45702' '(at5g24930 : 271.0) CONSTANS-like 4 (COL4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: CONSTANS-like 3 (TAIR:AT2G24790.1); Has 3148 Blast hits to 2480 proteins in 140 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 0; Plants - 2958; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|87043 : 81.8) no description available & (reliability: 542.0) & (original description: Putative COL4, Description = Zinc finger protein CONSTANS-LIKE 4, PFAM = PF06203;PF00643;PF00643)' T '27.3.7' 'RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family' 'niben101scf31945_47695-52517' '(at1g25440 : 275.0) B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G68520.1); Has 3476 Blast hits to 2333 proteins in 129 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 3380; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (reliability: 550.0) & (original description: Putative COL16, Description = Zinc finger protein CONSTANS-LIKE 16, PFAM = PF00643;PF06203)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.3scaffold1354_17347-20523' '(at1g64620 : 130.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT4G24060.1); Has 1750 Blast hits to 1190 proteins in 84 species: Archae - 0; Bacteria - 10; Metazoa - 53; Fungi - 16; Plants - 1095; Viruses - 0; Other Eukaryotes - 576 (source: NCBI BLink). & (gnl|cdd|66392 : 119.0) no description available & (o24463|pbf_maize : 109.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 260.0) & (original description: Putative dof, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.3scaffold2757_44357-47393' '(at4g24060 : 134.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT1G64620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66392 : 116.0) no description available & (o24463|pbf_maize : 96.7) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 268.0) & (original description: Putative NtBBF2, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.3scaffold5927_521-3411' '(gnl|cdd|66392 : 116.0) no description available & (at5g65590 : 113.0) Dof-type zinc finger DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF binding protein 4 (TAIR:AT5G60850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24463|pbf_maize : 106.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 226.0) & (original description: Putative DOF5, Description = DOF domain class transcription factor, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.3scaffold7244_44757-48233' '(at3g61850 : 166.0) Zinc finger transcription factor of the Dof family involved in the control of seed germination.; dof affecting germination 1 (DAG1); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT2G46590.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66392 : 121.0) no description available & (o24463|pbf_maize : 106.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 332.0) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.3scaffold10003_29087-32409' '(at1g28310 : 122.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF-binding protein 3 (TAIR:AT3G55370.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66392 : 120.0) no description available & (o24463|pbf_maize : 108.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 244.0) & (original description: Putative dof2, Description = Putative DOF zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.3scaffold12869_1-2978' '(at2g37590 : 148.0) DNA binding with one finger 2.4 (DOF2.4); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF-binding protein 3 (TAIR:AT3G55370.2); Has 1447 Blast hits to 1391 proteins in 103 species: Archae - 4; Bacteria - 20; Metazoa - 104; Fungi - 10; Plants - 1085; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|66392 : 114.0) no description available & (o24463|pbf_maize : 105.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 296.0) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.3scaffold30913_7089-11202' '(at3g47500 : 243.0) Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.; cycling DOF factor 3 (CDF3); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: cycling DOF factor 1 (TAIR:AT5G62430.1); Has 1160 Blast hits to 1145 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 10; Plants - 1084; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|66392 : 120.0) no description available & (o24463|pbf_maize : 96.3) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 486.0) & (original description: Putative CDF3, Description = Cyclic dof factor 3, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.3scaffold30971_18372-21411' '(at3g55370 : 136.0) Encodes a nuclear localized Dof domain containing transcription factor expressed primarily in roots. Responsive to salicylic acid. Transgenic overexpressors have yellow leaves and short, defective roots.; OBF-binding protein 3 (OBP3); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DNA binding with one finger 2.4 (TAIR:AT2G37590.1). & (gnl|cdd|66392 : 120.0) no description available & (o24463|pbf_maize : 98.6) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 272.0) & (original description: Putative dof1, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.3scaffold60842_6132-8938' '(at5g60850 : 115.0) Encodes a zinc finger protein.; OBF binding protein 4 (OBP4); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DOF zinc finger protein 1 (TAIR:AT1G51700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66392 : 112.0) no description available & (o24463|pbf_maize : 107.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 230.0) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.3scaffold62463_5241-8843' '(at2g37590 : 140.0) DNA binding with one finger 2.4 (DOF2.4); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF-binding protein 3 (TAIR:AT3G55370.2); Has 1447 Blast hits to 1391 proteins in 103 species: Archae - 4; Bacteria - 20; Metazoa - 104; Fungi - 10; Plants - 1085; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|66392 : 121.0) no description available & (o24463|pbf_maize : 97.8) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 280.0) & (original description: Putative DOF8, Description = DOF domain class transcription factor, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.3scaffold86940_769-3374' '(at1g51700 : 114.0) Encodes dof zinc finger protein (adof1).; DOF zinc finger protein 1 (DOF1); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DOF zinc finger protein 2 (TAIR:AT3G21270.1); Has 1091 Blast hits to 1086 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1086; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66392 : 114.0) no description available & (o24463|pbf_maize : 95.9) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 228.0) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.3scaffold88857_2644-5164' '(at1g29160 : 148.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT2G34140.1); Has 1076 Blast hits to 1071 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1071; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66392 : 121.0) no description available & (p38564|mnb1a_maize : 99.0) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 296.0) & (original description: Putative CDF1, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.5scaffold104_321353-324560' '(at3g55370 : 133.0) Encodes a nuclear localized Dof domain containing transcription factor expressed primarily in roots. Responsive to salicylic acid. Transgenic overexpressors have yellow leaves and short, defective roots.; OBF-binding protein 3 (OBP3); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DNA binding with one finger 2.4 (TAIR:AT2G37590.1). & (gnl|cdd|66392 : 118.0) no description available & (o24463|pbf_maize : 97.4) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 266.0) & (original description: Putative dof1, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.5scaffold376_584768-587807' '(at3g55370 : 136.0) Encodes a nuclear localized Dof domain containing transcription factor expressed primarily in roots. Responsive to salicylic acid. Transgenic overexpressors have yellow leaves and short, defective roots.; OBF-binding protein 3 (OBP3); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DNA binding with one finger 2.4 (TAIR:AT2G37590.1). & (gnl|cdd|66392 : 118.0) no description available & (o24463|pbf_maize : 97.8) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 272.0) & (original description: Putative dof1, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.5scaffold2716_134490-137712' '(at5g02460 : 142.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DNA binding with one finger 2.4 (TAIR:AT2G37590.1); Has 1212 Blast hits to 1182 proteins in 84 species: Archae - 0; Bacteria - 4; Metazoa - 69; Fungi - 10; Plants - 1097; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|66392 : 111.0) no description available & (o24463|pbf_maize : 102.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 284.0) & (original description: Putative dof1, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.5scaffold4372_124212-127390' '(at4g24060 : 125.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT1G64620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66392 : 120.0) no description available & (o24463|pbf_maize : 109.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 250.0) & (original description: Putative dof, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.5scaffold4607_99701-103315' '(at2g28510 : 134.0) Dof-type zinc finger DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: TARGET OF MONOPTEROS 6 (TAIR:AT5G60200.1); Has 1531 Blast hits to 1461 proteins in 73 species: Archae - 0; Bacteria - 1; Metazoa - 1; Fungi - 8; Plants - 1087; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink). & (gnl|cdd|66392 : 123.0) no description available & (o24463|pbf_maize : 103.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 268.0) & (original description: Putative DOF1, Description = DOF domain class transcription factor, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'nbv0.5scaffold6999_65924-69526' '(at2g37590 : 141.0) DNA binding with one finger 2.4 (DOF2.4); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF-binding protein 3 (TAIR:AT3G55370.2); Has 1447 Blast hits to 1391 proteins in 103 species: Archae - 4; Bacteria - 20; Metazoa - 104; Fungi - 10; Plants - 1085; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|66392 : 119.0) no description available & (o24463|pbf_maize : 98.2) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 282.0) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben044scf00000296ctg019_24089-26531' '(at5g60200 : 116.0) Encodes a Dof-type transcription factor.; TARGET OF MONOPTEROS 6 (TMO6); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G45610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66392 : 116.0) no description available & (o24463|pbf_maize : 110.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 232.0) & (original description: Putative DOF6, Description = DOF domain class transcription factor, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben044scf00005477ctg013_1-2414' '(gnl|cdd|66392 : 109.0) no description available & (at5g62940 : 93.2) HCA2 induces the formation of interfascicular cambium and regulates vascular tissue development in the aerial parts of the plant. Evidence from both gain of function and dominant negative alleles.; HIGH CAMBIAL ACTIVITY2 (HCA2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: TARGET OF MONOPTEROS 6 (TAIR:AT5G60200.1); Has 1915 Blast hits to 1778 proteins in 135 species: Archae - 0; Bacteria - 49; Metazoa - 135; Fungi - 61; Plants - 1116; Viruses - 0; Other Eukaryotes - 554 (source: NCBI BLink). & (o24463|pbf_maize : 89.4) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 186.4) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben044scf00005477ctg034_4249-7574' '(gnl|cdd|66392 : 121.0) no description available & (at1g28310 : 120.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF-binding protein 3 (TAIR:AT3G55370.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o24463|pbf_maize : 110.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 240.0) & (original description: Putative dof2, Description = Putative DOF zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben044scf00008326ctg001_1-1999' '(at1g64620 : 129.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT4G24060.1); Has 1750 Blast hits to 1190 proteins in 84 species: Archae - 0; Bacteria - 10; Metazoa - 53; Fungi - 16; Plants - 1095; Viruses - 0; Other Eukaryotes - 576 (source: NCBI BLink). & (gnl|cdd|66392 : 118.0) no description available & (o24463|pbf_maize : 98.6) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 258.0) & (original description: Putative dof, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben044scf00012310ctg011_2472-5785' '(at5g02460 : 134.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DNA binding with one finger 2.4 (TAIR:AT2G37590.1); Has 1212 Blast hits to 1182 proteins in 84 species: Archae - 0; Bacteria - 4; Metazoa - 69; Fungi - 10; Plants - 1097; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|66392 : 119.0) no description available & (o24463|pbf_maize : 97.4) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 268.0) & (original description: Putative dof1, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben044scf00012788ctg002_1-3122' '(at2g37590 : 150.0) DNA binding with one finger 2.4 (DOF2.4); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF-binding protein 3 (TAIR:AT3G55370.2); Has 1447 Blast hits to 1391 proteins in 103 species: Archae - 4; Bacteria - 20; Metazoa - 104; Fungi - 10; Plants - 1085; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|66392 : 113.0) no description available & (o24463|pbf_maize : 106.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 300.0) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben044scf00023083ctg002_7446-12252' '(at5g39660 : 243.0) Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.; cycling DOF factor 2 (CDF2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: cycling DOF factor 3 (TAIR:AT3G47500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66392 : 119.0) no description available & (p38564|mnb1a_maize : 97.8) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 486.0) & (original description: Putative ovg30, Description = Putative DNA-binding protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben044scf00024833ctg006_1479-5006' '(at5g39660 : 234.0) Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.; cycling DOF factor 2 (CDF2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: cycling DOF factor 3 (TAIR:AT3G47500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66392 : 126.0) no description available & (p38564|mnb1a_maize : 97.8) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 468.0) & (original description: Putative CDF1, Description = Cyclic dof factor 1, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben044scf00027552ctg004_38489-41871' '(at2g28510 : 135.0) Dof-type zinc finger DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: TARGET OF MONOPTEROS 6 (TAIR:AT5G60200.1); Has 1531 Blast hits to 1461 proteins in 73 species: Archae - 0; Bacteria - 1; Metazoa - 1; Fungi - 8; Plants - 1087; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink). & (o24463|pbf_maize : 122.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (gnl|cdd|66392 : 119.0) no description available & (reliability: 270.0) & (original description: Putative DOF1, Description = DOF domain class transcription factor, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101ctg15867_1-2104' '(at5g02460 : 138.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DNA binding with one finger 2.4 (TAIR:AT2G37590.1); Has 1212 Blast hits to 1182 proteins in 84 species: Archae - 0; Bacteria - 4; Metazoa - 69; Fungi - 10; Plants - 1097; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|66392 : 120.0) no description available & (o24463|pbf_maize : 101.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 276.0) & (original description: Putative dof1, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf00089_404517-407260' '(at5g60200 : 135.0) Encodes a Dof-type transcription factor.; TARGET OF MONOPTEROS 6 (TMO6); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G45610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o24463|pbf_maize : 124.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (gnl|cdd|66392 : 123.0) no description available & (reliability: 270.0) & (original description: Putative DOF1, Description = DOF domain class transcription factor, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf00193_294627-299410' '(at5g39660 : 236.0) Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.; cycling DOF factor 2 (CDF2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: cycling DOF factor 3 (TAIR:AT3G47500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66392 : 125.0) no description available & (p38564|mnb1a_maize : 100.0) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 472.0) & (original description: Putative CDF2, Description = Cyclic dof factor 2, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf00245_386354-390566' '(at3g47500 : 226.0) Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.; cycling DOF factor 3 (CDF3); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: cycling DOF factor 1 (TAIR:AT5G62430.1); Has 1160 Blast hits to 1145 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 10; Plants - 1084; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|66392 : 118.0) no description available & (p38564|mnb1a_maize : 95.1) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 452.0) & (original description: Putative SRF1, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf00808_490373-494067' '(at3g61850 : 143.0) Zinc finger transcription factor of the Dof family involved in the control of seed germination.; dof affecting germination 1 (DAG1); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT2G46590.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66392 : 117.0) no description available & (o24463|pbf_maize : 111.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 286.0) & (original description: Putative dof, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf01017_73799-76662' '(at3g52440 : 125.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT1G21340.1); Has 1099 Blast hits to 1090 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1092; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66392 : 122.0) no description available & (o24463|pbf_maize : 106.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 250.0) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf01214_61184-68609' '(at1g64620 : 119.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT4G24060.1); Has 1750 Blast hits to 1190 proteins in 84 species: Archae - 0; Bacteria - 10; Metazoa - 53; Fungi - 16; Plants - 1095; Viruses - 0; Other Eukaryotes - 576 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative Dof8, Description = Dof protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf02207_1152657-1155906' '(at5g62940 : 149.0) HCA2 induces the formation of interfascicular cambium and regulates vascular tissue development in the aerial parts of the plant. Evidence from both gain of function and dominant negative alleles.; HIGH CAMBIAL ACTIVITY2 (HCA2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: TARGET OF MONOPTEROS 6 (TAIR:AT5G60200.1); Has 1915 Blast hits to 1778 proteins in 135 species: Archae - 0; Bacteria - 49; Metazoa - 135; Fungi - 61; Plants - 1116; Viruses - 0; Other Eukaryotes - 554 (source: NCBI BLink). & (gnl|cdd|66392 : 124.0) no description available & (o24463|pbf_maize : 116.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 298.0) & (original description: Putative Dof14, Description = DNA binding with one finger 14, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf02237_1064570-1067777' '(at5g62940 : 144.0) HCA2 induces the formation of interfascicular cambium and regulates vascular tissue development in the aerial parts of the plant. Evidence from both gain of function and dominant negative alleles.; HIGH CAMBIAL ACTIVITY2 (HCA2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: TARGET OF MONOPTEROS 6 (TAIR:AT5G60200.1); Has 1915 Blast hits to 1778 proteins in 135 species: Archae - 0; Bacteria - 49; Metazoa - 135; Fungi - 61; Plants - 1116; Viruses - 0; Other Eukaryotes - 554 (source: NCBI BLink). & (gnl|cdd|66392 : 122.0) no description available & (o24463|pbf_maize : 115.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 288.0) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf02771_309393-312995' '(at2g37590 : 140.0) DNA binding with one finger 2.4 (DOF2.4); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF-binding protein 3 (TAIR:AT3G55370.2); Has 1447 Blast hits to 1391 proteins in 103 species: Archae - 4; Bacteria - 20; Metazoa - 104; Fungi - 10; Plants - 1085; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|66392 : 120.0) no description available & (o24463|pbf_maize : 97.4) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 280.0) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf02907_694881-698319' '(at5g65590 : 164.0) Dof-type zinc finger DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF binding protein 4 (TAIR:AT5G60850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66392 : 121.0) no description available & (o24463|pbf_maize : 113.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 328.0) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf03309_886461-888973' '(at1g29160 : 156.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT2G34140.1); Has 1076 Blast hits to 1071 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1071; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66392 : 118.0) no description available & (p38564|mnb1a_maize : 97.8) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 312.0) & (original description: Putative dof8, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf03551_16059-19024' '(gnl|cdd|66392 : 122.0) no description available & (at5g60850 : 112.0) Encodes a zinc finger protein.; OBF binding protein 4 (OBP4); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DOF zinc finger protein 1 (TAIR:AT1G51700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p38564|mnb1a_maize : 103.0) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 224.0) & (original description: Putative dag, Description = Zinc finger, Dof-type, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf03761_73640-77413' '(at2g46590 : 121.0) encodes a protein containing Dof zinc finger motifs. expression is limited to vascular system of the mother plant. recessive mutation is inherited as maternal-effect and expression is not detected in the embryo. mutants are defective in seed germination. mutants are more dependent on light and cold treatment and less sensitive to gibberellin during seed germination.; DOF AFFECTING GERMINATION 2 (DAG2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G61850.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66392 : 116.0) no description available & (o24463|pbf_maize : 99.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 242.0) & (original description: Putative dof, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf04006_236932-239891' '(gnl|cdd|66392 : 118.0) no description available & (at3g52440 : 116.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT1G21340.1); Has 1099 Blast hits to 1090 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1092; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (p38564|mnb1a_maize : 95.5) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 232.0) & (original description: Putative dof2, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf04384_516837-519685' '(gnl|cdd|66392 : 110.0) no description available & (at5g60200 : 106.0) Encodes a Dof-type transcription factor.; TARGET OF MONOPTEROS 6 (TMO6); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G45610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p38564|mnb1a_maize : 103.0) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 212.0) & (original description: Putative Dof6, Description = Dof6 transcription factor, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf04410_315585-318550' '(gnl|cdd|66392 : 124.0) no description available & (at5g60850 : 112.0) Encodes a zinc finger protein.; OBF binding protein 4 (OBP4); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DOF zinc finger protein 1 (TAIR:AT1G51700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24463|pbf_maize : 103.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 224.0) & (original description: Putative dag, Description = Zinc finger, Dof-type, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf04418_894320-897282' '(gnl|cdd|66392 : 120.0) no description available & (at3g52440 : 118.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT1G21340.1); Has 1099 Blast hits to 1090 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1092; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (p38564|mnb1a_maize : 96.7) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 236.0) & (original description: Putative Dof22, Description = Dof protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf05060_573265-578220' '(at5g39660 : 250.0) Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.; cycling DOF factor 2 (CDF2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: cycling DOF factor 3 (TAIR:AT3G47500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66392 : 120.0) no description available & (p38564|mnb1a_maize : 96.3) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 500.0) & (original description: Putative Dof1, Description = DNA binding with one finger 1, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf05206_306355-309413' '(at3g55370 : 146.0) Encodes a nuclear localized Dof domain containing transcription factor expressed primarily in roots. Responsive to salicylic acid. Transgenic overexpressors have yellow leaves and short, defective roots.; OBF-binding protein 3 (OBP3); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DNA binding with one finger 2.4 (TAIR:AT2G37590.1). & (gnl|cdd|66392 : 115.0) no description available & (o24463|pbf_maize : 108.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 292.0) & (original description: Putative dof1, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf05272_227729-230334' '(at1g51700 : 114.0) Encodes dof zinc finger protein (adof1).; DOF zinc finger protein 1 (DOF1); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DOF zinc finger protein 2 (TAIR:AT3G21270.1); Has 1091 Blast hits to 1086 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1086; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66392 : 111.0) no description available & (o24463|pbf_maize : 95.9) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 228.0) & (original description: Putative Dof9, Description = Dof protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf05551_340345-344094' '(at5g62940 : 149.0) HCA2 induces the formation of interfascicular cambium and regulates vascular tissue development in the aerial parts of the plant. Evidence from both gain of function and dominant negative alleles.; HIGH CAMBIAL ACTIVITY2 (HCA2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: TARGET OF MONOPTEROS 6 (TAIR:AT5G60200.1); Has 1915 Blast hits to 1778 proteins in 135 species: Archae - 0; Bacteria - 49; Metazoa - 135; Fungi - 61; Plants - 1116; Viruses - 0; Other Eukaryotes - 554 (source: NCBI BLink). & (gnl|cdd|66392 : 124.0) no description available & (o24463|pbf_maize : 110.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 298.0) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf05674_46357-49183' '(at3g50410 : 139.0) Arabidopsis Dof protein containing a single 51-amino acid zinc finger DNA-binding domain, which may play an important roles in plant growth and development.; OBF binding protein 1 (OBP1); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT5G66940.1); Has 1129 Blast hits to 1124 proteins in 68 species: Archae - 0; Bacteria - 9; Metazoa - 17; Fungi - 6; Plants - 1084; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|66392 : 117.0) no description available & (o24463|pbf_maize : 105.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 278.0) & (original description: Putative dag, Description = Zinc finger, Dof-type, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf06127_121024-124638' '(at2g28510 : 132.0) Dof-type zinc finger DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: TARGET OF MONOPTEROS 6 (TAIR:AT5G60200.1); Has 1531 Blast hits to 1461 proteins in 73 species: Archae - 0; Bacteria - 1; Metazoa - 1; Fungi - 8; Plants - 1087; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink). & (gnl|cdd|66392 : 124.0) no description available & (o24463|pbf_maize : 104.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 264.0) & (original description: Putative DOF1, Description = DOF domain class transcription factor, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf06249_456519-461093' '(at3g47500 : 267.0) Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.; cycling DOF factor 3 (CDF3); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: cycling DOF factor 1 (TAIR:AT5G62430.1); Has 1160 Blast hits to 1145 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 10; Plants - 1084; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|66392 : 123.0) no description available & (p38564|mnb1a_maize : 97.4) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 534.0) & (original description: Putative CDF3, Description = Cyclic dof factor 3, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf06570_81552-84877' '(at1g28310 : 120.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF-binding protein 3 (TAIR:AT3G55370.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66392 : 120.0) no description available & (o24463|pbf_maize : 109.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 240.0) & (original description: Putative dof2, Description = Putative DOF zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf06793_770279-773169' '(gnl|cdd|66392 : 116.0) no description available & (at5g65590 : 113.0) Dof-type zinc finger DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF binding protein 4 (TAIR:AT5G60850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24463|pbf_maize : 107.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 226.0) & (original description: Putative Dof7, Description = Dof protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf07405_188386-191632' '(at2g37590 : 150.0) DNA binding with one finger 2.4 (DOF2.4); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF-binding protein 3 (TAIR:AT3G55370.2); Has 1447 Blast hits to 1391 proteins in 103 species: Archae - 4; Bacteria - 20; Metazoa - 104; Fungi - 10; Plants - 1085; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|66392 : 112.0) no description available & (o24463|pbf_maize : 105.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 300.0) & (original description: Putative DOF8, Description = DOF domain class transcription factor, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf07508_724476-728589' '(at3g47500 : 233.0) Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.; cycling DOF factor 3 (CDF3); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: cycling DOF factor 1 (TAIR:AT5G62430.1); Has 1160 Blast hits to 1145 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 10; Plants - 1084; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|66392 : 119.0) no description available & (o24463|pbf_maize : 96.7) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 466.0) & (original description: Putative CDF3, Description = Cyclic dof factor 3, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf08002_91008-95392' '(at5g39660 : 246.0) Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.; cycling DOF factor 2 (CDF2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: cycling DOF factor 3 (TAIR:AT3G47500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66392 : 124.0) no description available & (p38564|mnb1a_maize : 97.4) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 492.0) & (original description: Putative CDF2, Description = Cyclic dof factor 2, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf08211_285468-288136' '(at1g51700 : 114.0) Encodes dof zinc finger protein (adof1).; DOF zinc finger protein 1 (DOF1); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DOF zinc finger protein 2 (TAIR:AT3G21270.1); Has 1091 Blast hits to 1086 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1086; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66392 : 113.0) no description available & (p38564|mnb1a_maize : 99.4) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 228.0) & (original description: Putative dag, Description = Zinc finger, Dof-type, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf08791_35996-38844' '(gnl|cdd|66392 : 110.0) no description available & (at5g62940 : 93.6) HCA2 induces the formation of interfascicular cambium and regulates vascular tissue development in the aerial parts of the plant. Evidence from both gain of function and dominant negative alleles.; HIGH CAMBIAL ACTIVITY2 (HCA2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: TARGET OF MONOPTEROS 6 (TAIR:AT5G60200.1); Has 1915 Blast hits to 1778 proteins in 135 species: Archae - 0; Bacteria - 49; Metazoa - 135; Fungi - 61; Plants - 1116; Viruses - 0; Other Eukaryotes - 554 (source: NCBI BLink). & (o24463|pbf_maize : 89.7) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 187.2) & (original description: Putative dag, Description = Dof protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf08791_202800-206122' '(at1g28310 : 122.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF-binding protein 3 (TAIR:AT3G55370.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66392 : 119.0) no description available & (o24463|pbf_maize : 108.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 244.0) & (original description: Putative dof2, Description = Putative DOF zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf09321_53097-55765' '(at1g51700 : 118.0) Encodes dof zinc finger protein (adof1).; DOF zinc finger protein 1 (DOF1); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DOF zinc finger protein 2 (TAIR:AT3G21270.1); Has 1091 Blast hits to 1086 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1086; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66392 : 111.0) no description available & (o24463|pbf_maize : 99.4) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 236.0) & (original description: Putative dag, Description = Zinc finger, Dof-type, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf13522_184221-187362' '(at5g02460 : 133.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DNA binding with one finger 2.4 (TAIR:AT2G37590.1); Has 1212 Blast hits to 1182 proteins in 84 species: Archae - 0; Bacteria - 4; Metazoa - 69; Fungi - 10; Plants - 1097; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|66392 : 119.0) no description available & (o24463|pbf_maize : 97.1) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 266.0) & (original description: Putative dof1, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf13533_174960-178867' '(at5g62940 : 156.0) HCA2 induces the formation of interfascicular cambium and regulates vascular tissue development in the aerial parts of the plant. Evidence from both gain of function and dominant negative alleles.; HIGH CAMBIAL ACTIVITY2 (HCA2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: TARGET OF MONOPTEROS 6 (TAIR:AT5G60200.1); Has 1915 Blast hits to 1778 proteins in 135 species: Archae - 0; Bacteria - 49; Metazoa - 135; Fungi - 61; Plants - 1116; Viruses - 0; Other Eukaryotes - 554 (source: NCBI BLink). & (gnl|cdd|66392 : 121.0) no description available & (o24463|pbf_maize : 113.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 312.0) & (original description: Putative dag, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf14922_15547-19006' '(at3g61850 : 157.0) Zinc finger transcription factor of the Dof family involved in the control of seed germination.; dof affecting germination 1 (DAG1); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT2G46590.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66392 : 120.0) no description available & (o24463|pbf_maize : 106.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 314.0) & (original description: Putative dof, Description = Dof zinc finger protein, PFAM = PF02701)' T '27.3.8' 'RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family' 'niben101scf15390_46298-48990' '(at5g60200 : 116.0) Encodes a Dof-type transcription factor.; TARGET OF MONOPTEROS 6 (TMO6); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G45610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66392 : 116.0) no description available & (o24463|pbf_maize : 107.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 232.0) & (original description: Putative DOF6, Description = DOF domain class transcription factor, PFAM = PF02701)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold57_148029-154485' '(at4g24470 : 169.0) ZIM is a putative transcription factor containing an atypical GATA-type zinc-finger motif.; TIFY1; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Tify (InterPro:IPR010399), CCT domain (InterPro:IPR010402), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: ZIM-LIKE 2 (TAIR:AT1G51600.2). & (reliability: 338.0) & (original description: Putative ZIM, Description = GATA transcription factor 24, PFAM = PF06203;PF00320;PF06200)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold8662_41080-44683' '(at5g25830 : 217.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 12 (GATA12); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 9 (TAIR:AT4G32890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 434.0) & (original description: Putative GATA9, Description = GATA transcription factor 9, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold11049_38979-42363' '(at5g66320 : 206.0) Encodes GATA transcription factor gene GNC, involved in regulating carbon and nitrogen metabolism. Expression occurs in aerial tissue at an early stage of development and is inducible by nitrate.; GATA transcription factor 5 (GATA5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 6 (TAIR:AT3G51080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative GATA5, Description = GATA transcription factor 5, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold13942_15878-18937' '(at3g60530 : 176.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 4 (GATA4); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 2 (TAIR:AT2G45050.1); Has 1515 Blast hits to 1478 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 43; Fungi - 592; Plants - 818; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative GATA4, Description = GATA transcription factor 4, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold20371_1-2373' '(at3g06740 : 82.8) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 15 (GATA15); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 16 (TAIR:AT5G49300.1); Has 1479 Blast hits to 1431 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 586; Plants - 738; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative GATA15, Description = GATA transcription factor 15, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold22489_7373-14053' '(at3g21175 : 109.0) member of a novel family of plant-specific GATA-type transcription factors.; ZIM-like 1 (ZML1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: ZIM-LIKE 2 (TAIR:AT1G51600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative ZIM, Description = GATA transcription factor 24, PFAM = PF00320;PF06203)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold27170_9955-17603' '(at1g51600 : 122.0) member of a novel family of plant-specific GATA-type transcription factors.; ZIM-LIKE 2 (ZML2); FUNCTIONS IN: sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), Zinc finger, GATA-type (InterPro:IPR000679), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: ZIM-like 1 (TAIR:AT3G21175.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative ZIM, Description = GATA transcription factor 25, PFAM = PF06200;PF06203;PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold64664_5531-9972' '(at3g54810 : 137.0) Encodes a protein containing a GATA type zinc finger domain that is expressed in the embryo axis and involved in germination. Mutants have a reduced rate of germination even when stratified.; BLUE MICROPYLAR END 3 (BME3); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 11 (TAIR:AT1G08010.2); Has 1480 Blast hits to 1450 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 544; Plants - 806; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative AGP1, Description = AG-motif binding protein-1, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold76504_4261-7864' '(at3g60530 : 180.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 4 (GATA4); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 2 (TAIR:AT2G45050.1); Has 1515 Blast hits to 1478 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 43; Fungi - 592; Plants - 818; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative GATA2, Description = GATA transcription factor 2, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold81096_1450-5045' '(at4g17570 : 99.4) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 26 (GATA26); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 27 (TAIR:AT5G47140.1). & (reliability: 198.8) & (original description: Putative PGSC0003DMG400023781, Description = GATA zinc finger containing protein-like protein, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold85452_1-4189' '(at3g19184 : 132.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative ABI14, Description = B3 domain-containing protein, PFAM = PF02362)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold88014_1034-4265' '(at3g50870 : 149.0) Encodes a GATA factort transcriptional regulator required to position the proembryo boundary in the early embryo.; MONOPOLE (MNP); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 19 (TAIR:AT4G36620.1); Has 2164 Blast hits to 2065 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 372; Fungi - 903; Plants - 779; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative GATA18, Description = GATA transcription factor 18, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold88081_69-3447' '(at5g25830 : 213.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 12 (GATA12); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 9 (TAIR:AT4G32890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative GATA9, Description = GATA transcription factor 9, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.3scaffold98360_1393-4241' '(at5g66320 : 188.0) Encodes GATA transcription factor gene GNC, involved in regulating carbon and nitrogen metabolism. Expression occurs in aerial tissue at an early stage of development and is inducible by nitrate.; GATA transcription factor 5 (GATA5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 6 (TAIR:AT3G51080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative GATA5, Description = GATA transcription factor 5, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.5scaffold50_42257-49281' '(at3g21175 : 144.0) member of a novel family of plant-specific GATA-type transcription factors.; ZIM-like 1 (ZML1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: ZIM-LIKE 2 (TAIR:AT1G51600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative ZIM2, Description = GATA transcription factor 24, PFAM = PF06203;PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.5scaffold270_874569-877217' '(at3g06740 : 81.3) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 15 (GATA15); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 16 (TAIR:AT5G49300.1); Has 1479 Blast hits to 1431 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 586; Plants - 738; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative GNC, Description = GATA transcription factor 15, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.5scaffold882_477288-480347' '(at3g60530 : 184.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 4 (GATA4); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 2 (TAIR:AT2G45050.1); Has 1515 Blast hits to 1478 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 43; Fungi - 592; Plants - 818; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative AGP3, Description = AG-motif binding protein-3, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.5scaffold1187_260476-264800' '(at1g08010 : 148.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 11 (GATA11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 10 (TAIR:AT1G08000.2); Has 1564 Blast hits to 1518 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 649; Plants - 800; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative AGP1, Description = Transcription factor, GATA, plant, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.5scaffold1187_260530-265906' '(at1g08010 : 146.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 11 (GATA11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 10 (TAIR:AT1G08000.2); Has 1564 Blast hits to 1518 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 649; Plants - 800; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative BnaC08g43400D, Description = BnaC08g43400D protein, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.5scaffold1341_249949-253204' '(at3g06740 : 94.4) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 15 (GATA15); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 16 (TAIR:AT5G49300.1); Has 1479 Blast hits to 1431 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 586; Plants - 738; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative BnaC01g22040D, Description = BnaC01g22040D protein, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.5scaffold1848_307300-310531' '(at3g50870 : 130.0) Encodes a GATA factort transcriptional regulator required to position the proembryo boundary in the early embryo.; MONOPOLE (MNP); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 19 (TAIR:AT4G36620.1); Has 2164 Blast hits to 2065 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 372; Fungi - 903; Plants - 779; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative GNC, Description = GATA transcription factor 18, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.5scaffold2380_102786-106440' '(at3g24050 : 140.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 1 (GATA1); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 9 (TAIR:AT4G32890.1); Has 1635 Blast hits to 1587 proteins in 195 species: Archae - 0; Bacteria - 2; Metazoa - 169; Fungi - 549; Plants - 842; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative AGP1, Description = Transcription factor, GATA, plant, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.5scaffold3022_4720-8412' '(at4g26150 : 86.7) Encodes a member of the GATA factor family of zinc finger transcription factors.; cytokinin-responsive gata factor 1 (CGA1); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT5G56860.1); Has 1630 Blast hits to 1587 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 659; Plants - 751; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative GATA2, Description = GATA type zinc finger transcription factor family protein, putative, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'nbv0.5scaffold4403_115684-119663' '(at3g54810 : 136.0) Encodes a protein containing a GATA type zinc finger domain that is expressed in the embryo axis and involved in germination. Mutants have a reduced rate of germination even when stratified.; BLUE MICROPYLAR END 3 (BME3); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 11 (TAIR:AT1G08010.2); Has 1480 Blast hits to 1450 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 544; Plants - 806; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative AGP1, Description = AG-motif binding protein-1, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben044scf00000925ctg004_2830-5853' '(at3g06740 : 91.3) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 15 (GATA15); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 16 (TAIR:AT5G49300.1); Has 1479 Blast hits to 1431 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 586; Plants - 738; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative BnaC01g22040D, Description = BnaC01g22040D protein, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben044scf00001449ctg013_8600-11796' '(at1g08010 : 151.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 11 (GATA11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 10 (TAIR:AT1G08000.2); Has 1564 Blast hits to 1518 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 649; Plants - 800; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative AGP1, Description = Transcription factor, GATA, plant, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben044scf00003471ctg009_1-3734' '(at1g51600 : 104.0) member of a novel family of plant-specific GATA-type transcription factors.; ZIM-LIKE 2 (ZML2); FUNCTIONS IN: sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), Zinc finger, GATA-type (InterPro:IPR000679), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: ZIM-like 1 (TAIR:AT3G21175.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative ZIM2, Description = GATA transcription factor 24, PFAM = PF06200;PF06203)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben044scf00015126ctg004_1-3163' '(at1g51600 : 113.0) member of a novel family of plant-specific GATA-type transcription factors.; ZIM-LIKE 2 (ZML2); FUNCTIONS IN: sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), Zinc finger, GATA-type (InterPro:IPR000679), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: ZIM-like 1 (TAIR:AT3G21175.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative ZIM, Description = GATA transcription factor 25, PFAM = PF06203;PF06200;PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben044scf00015779ctg022_1450-7066' '(at3g21175 : 166.0) member of a novel family of plant-specific GATA-type transcription factors.; ZIM-like 1 (ZML1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: ZIM-LIKE 2 (TAIR:AT1G51600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative ZIM, Description = GATA transcription factor 24, PFAM = PF00320;PF06203;PF06200)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben044scf00036215ctg008_597-7527' '(at3g19184 : 124.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative PGSC0003DMG400015771, Description = B3 DNA binding domain-containing protein, PFAM = PF02362)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben044scf00049257ctg000_1-1347' '(at3g06740 : 96.7) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 15 (GATA15); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 16 (TAIR:AT5G49300.1); Has 1479 Blast hits to 1431 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 586; Plants - 738; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative GATA15, Description = GATA transcription factor 15, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben044scf00053883ctg002_1-3577' '(at3g19184 : 132.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative ABI14, Description = B3 domain-containing protein, PFAM = PF02362)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf00094_240330-243759' '(at3g06740 : 103.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 15 (GATA15); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 16 (TAIR:AT5G49300.1); Has 1479 Blast hits to 1431 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 586; Plants - 738; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative GATA15, Description = GATA transcription factor 15, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf00397_119000-123538' '(at3g60530 : 175.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 4 (GATA4); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 2 (TAIR:AT2G45050.1); Has 1515 Blast hits to 1478 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 43; Fungi - 592; Plants - 818; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative GATA2, Description = GATA transcription factor 2, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf00428_1809858-1818806' '(at4g17570 : 379.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 26 (GATA26); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 27 (TAIR:AT5G47140.1). & (reliability: 758.0) & (original description: Putative GATA26, Description = GATA transcription factor 26, PFAM = PF00320;PF13919)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf00839_477271-483924' '(at3g19184 : 124.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative PGSC0003DMG400015771, Description = B3 DNA binding domain-containing protein, PFAM = PF02362)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf01105_151583-156241' '(at3g54810 : 133.0) Encodes a protein containing a GATA type zinc finger domain that is expressed in the embryo axis and involved in germination. Mutants have a reduced rate of germination even when stratified.; BLUE MICROPYLAR END 3 (BME3); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 11 (TAIR:AT1G08010.2); Has 1480 Blast hits to 1450 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 544; Plants - 806; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative AGP1, Description = AG-motif binding protein-1, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf01126_342035-344658' '(at5g49300 : 90.5) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 16 (GATA16); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 15 (TAIR:AT3G06740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative GATA16, Description = GATA transcription factor 16, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf01272_64325-69307' '(at3g19184 : 132.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative ABI14, Description = B3 domain-containing protein, PFAM = PF02362)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf01272_74049-78164' '(at3g19184 : 136.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative ABI14, Description = B3 domain-containing protein, PFAM = PF02362)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf01272_89094-95404' '(at5g42700 : 115.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G19184.1); Has 276 Blast hits to 264 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 271; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative PGSC0003DMG400025791, Description = B3 domain-containing protein, PFAM = PF02362)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf01422_203265-208414' '(at1g08010 : 150.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 11 (GATA11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 10 (TAIR:AT1G08000.2); Has 1564 Blast hits to 1518 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 649; Plants - 800; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative AGP1, Description = Transcription factor, GATA, plant, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf01422_204438-208566' '(at1g08010 : 149.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 11 (GATA11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 10 (TAIR:AT1G08000.2); Has 1564 Blast hits to 1518 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 649; Plants - 800; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative AGP1, Description = Transcription factor, GATA, plant, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf01433_538674-542062' '(at5g66320 : 208.0) Encodes GATA transcription factor gene GNC, involved in regulating carbon and nitrogen metabolism. Expression occurs in aerial tissue at an early stage of development and is inducible by nitrate.; GATA transcription factor 5 (GATA5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 6 (TAIR:AT3G51080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 416.0) & (original description: Putative GATA5, Description = GATA transcription factor 5, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf01572_139516-143555' '(at3g54810 : 137.0) Encodes a protein containing a GATA type zinc finger domain that is expressed in the embryo axis and involved in germination. Mutants have a reduced rate of germination even when stratified.; BLUE MICROPYLAR END 3 (BME3); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 11 (TAIR:AT1G08010.2); Has 1480 Blast hits to 1450 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 544; Plants - 806; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative AGMBP, Description = AG-motif binding protein, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf01611_151338-154902' '(at5g25830 : 216.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 12 (GATA12); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 9 (TAIR:AT4G32890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative GATA9, Description = GATA transcription factor 9, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf01922_251839-255893' '(at3g24050 : 140.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 1 (GATA1); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 9 (TAIR:AT4G32890.1); Has 1635 Blast hits to 1587 proteins in 195 species: Archae - 0; Bacteria - 2; Metazoa - 169; Fungi - 549; Plants - 842; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative GATA1, Description = GATA transcription factor 1, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf02164_684546-729885' '(at4g24470 : 85.5) ZIM is a putative transcription factor containing an atypical GATA-type zinc-finger motif.; TIFY1; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Tify (InterPro:IPR010399), CCT domain (InterPro:IPR010402), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: ZIM-LIKE 2 (TAIR:AT1G51600.2). & (reliability: 171.0) & (original description: Putative ZML1, Description = GATA transcription factor 28, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf02164_722645-730057' '(at3g21175 : 182.0) member of a novel family of plant-specific GATA-type transcription factors.; ZIM-like 1 (ZML1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: ZIM-LIKE 2 (TAIR:AT1G51600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative GATA24, Description = GATA transcription factor 24, PFAM = PF06200;PF00320;PF06203)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf02164_730266-736722' '(at4g24470 : 178.0) ZIM is a putative transcription factor containing an atypical GATA-type zinc-finger motif.; TIFY1; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Tify (InterPro:IPR010399), CCT domain (InterPro:IPR010402), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: ZIM-LIKE 2 (TAIR:AT1G51600.2). & (reliability: 356.0) & (original description: Putative ZIM, Description = GATA transcription factor 24, PFAM = PF00320;PF06200;PF06203)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf02294_104230-111938' '(at3g21175 : 121.0) member of a novel family of plant-specific GATA-type transcription factors.; ZIM-like 1 (ZML1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: ZIM-LIKE 2 (TAIR:AT1G51600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative ZIM, Description = GATA transcription factor 24, PFAM = PF00320;PF06203)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf02294_118828-134210' '(at3g21175 : 238.0) member of a novel family of plant-specific GATA-type transcription factors.; ZIM-like 1 (ZML1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: ZIM-LIKE 2 (TAIR:AT1G51600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 476.0) & (original description: Putative GATA28, Description = GATA transcription factor 28, PFAM = PF06203;PF00320;PF06200)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf02705_317248-325567' '(at4g17570 : 378.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 26 (GATA26); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 27 (TAIR:AT5G47140.1). & (reliability: 756.0) & (original description: Putative BnaA01g08480D, Description = BnaA01g08480D protein, PFAM = PF13919;PF16550;PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf02842_23386-27254' '(at3g24050 : 144.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 1 (GATA1); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 9 (TAIR:AT4G32890.1); Has 1635 Blast hits to 1587 proteins in 195 species: Archae - 0; Bacteria - 2; Metazoa - 169; Fungi - 549; Plants - 842; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative AGP2, Description = AG-motif binding protein-2, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf02887_23799-27673' '(at3g24050 : 142.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 1 (GATA1); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 9 (TAIR:AT4G32890.1); Has 1635 Blast hits to 1587 proteins in 195 species: Archae - 0; Bacteria - 2; Metazoa - 169; Fungi - 549; Plants - 842; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative AGP2, Description = AG-motif binding protein-2, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf03614_70605-75879' '(at1g08010 : 141.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 11 (GATA11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 10 (TAIR:AT1G08000.2); Has 1564 Blast hits to 1518 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 649; Plants - 800; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative BnaC08g43400D, Description = BnaC08g43400D protein, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf03660_305491-308688' '(at3g50870 : 144.0) Encodes a GATA factort transcriptional regulator required to position the proembryo boundary in the early embryo.; MONOPOLE (MNP); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 19 (TAIR:AT4G36620.1); Has 2164 Blast hits to 2065 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 372; Fungi - 903; Plants - 779; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative GATA18, Description = GATA transcription factor 18, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf03852_21978-30326' '(at4g17570 : 424.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 26 (GATA26); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 27 (TAIR:AT5G47140.1). & (reliability: 848.0) & (original description: Putative GATA26, Description = GATA transcription factor 26, PFAM = PF00320;PF13919)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf04664_210833-213892' '(at5g66320 : 176.0) Encodes GATA transcription factor gene GNC, involved in regulating carbon and nitrogen metabolism. Expression occurs in aerial tissue at an early stage of development and is inducible by nitrate.; GATA transcription factor 5 (GATA5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 6 (TAIR:AT3G51080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative GATA5, Description = GATA transcription factor 5, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf05444_26266-30647' '(at3g54810 : 136.0) Encodes a protein containing a GATA type zinc finger domain that is expressed in the embryo axis and involved in germination. Mutants have a reduced rate of germination even when stratified.; BLUE MICROPYLAR END 3 (BME3); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 11 (TAIR:AT1G08010.2); Has 1480 Blast hits to 1450 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 544; Plants - 806; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative AGP1, Description = AG-motif binding protein-1, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf05956_108163-116145' '(at4g17570 : 399.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 26 (GATA26); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 27 (TAIR:AT5G47140.1). & (reliability: 798.0) & (original description: Putative GATA26, Description = GATA transcription factor 26, PFAM = PF00320;PF13919)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf06045_21305-24997' '(at4g26150 : 84.7) Encodes a member of the GATA factor family of zinc finger transcription factors.; cytokinin-responsive gata factor 1 (CGA1); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT5G56860.1); Has 1630 Blast hits to 1587 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 659; Plants - 751; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative GATA2, Description = GATA domain class transcription factor, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf06441_88439-92525' '(at4g32890 : 135.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 9 (GATA9); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 12 (TAIR:AT5G25830.1); Has 1477 Blast hits to 1442 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 34; Fungi - 587; Plants - 795; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative AGMBP, Description = AG-motif binding protein, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf07287_30172-33526' '(at3g50870 : 119.0) Encodes a GATA factort transcriptional regulator required to position the proembryo boundary in the early embryo.; MONOPOLE (MNP); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 19 (TAIR:AT4G36620.1); Has 2164 Blast hits to 2065 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 372; Fungi - 903; Plants - 779; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative BnaAnng31200D, Description = BnaAnng31200D protein, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf08635_199833-203193' '(at3g60530 : 172.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 4 (GATA4); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 2 (TAIR:AT2G45050.1); Has 1515 Blast hits to 1478 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 43; Fungi - 592; Plants - 818; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative GATA2, Description = GATA transcription factor 2, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf08782_256819-260245' '(at3g06740 : 91.3) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 15 (GATA15); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 16 (TAIR:AT5G49300.1); Has 1479 Blast hits to 1431 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 586; Plants - 738; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative BnaC01g22040D, Description = BnaC01g22040D protein, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf09149_17805-21413' '(at4g17570 : 102.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 26 (GATA26); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 27 (TAIR:AT5G47140.1). & (reliability: 204.0) & (original description: Putative PGSC0003DMG400023781, Description = GATA zinc finger containing protein-like protein, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf09363_109838-114622' '(at5g25830 : 201.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 12 (GATA12); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 9 (TAIR:AT4G32890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative BnaC01g05510D, Description = BnaC01g05510D protein, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf12928_146945-151031' '(at5g42700 : 191.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G19184.1); Has 276 Blast hits to 264 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 271; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative At5g42700, Description = B3 domain-containing protein At5g42700, PFAM = PF02362)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf14310_52990-59269' '(at3g21175 : 126.0) member of a novel family of plant-specific GATA-type transcription factors.; ZIM-like 1 (ZML1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: ZIM-LIKE 2 (TAIR:AT1G51600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative ZIM, Description = GATA transcription factor 24, PFAM = PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf14310_63079-69759' '(at3g21175 : 149.0) member of a novel family of plant-specific GATA-type transcription factors.; ZIM-like 1 (ZML1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: ZIM-LIKE 2 (TAIR:AT1G51600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative GATA28, Description = GATA transcription factor 28, PFAM = PF06203;PF06200;PF00320)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf15496_278151-285043' '(at4g17570 : 402.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 26 (GATA26); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 27 (TAIR:AT5G47140.1). & (reliability: 804.0) & (original description: Putative GATA26, Description = GATA transcription factor 26, PFAM = PF00320;PF13919)' T '27.3.9' 'RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family' 'niben101scf16530_16447-26754' '(at4g17570 : 404.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 26 (GATA26); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 27 (TAIR:AT5G47140.1). & (reliability: 808.0) & (original description: Putative GATA26, Description = GATA transcription factor 26, PFAM = PF13919;PF00320)' T '27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'nbv0.3scaffold5743_41250-50117' '(gnl|cdd|68268 : 188.0) no description available & (at2g26580 : 162.0) YABBY5 (YAB5); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT1G08465.1); Has 458 Blast hits to 449 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 444; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (q7xim7|yab1_orysa : 125.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 324.0) & (original description: Putative YAB2, Description = Putative axial regulator YABBY 2, PFAM = PF04690)' T '27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'nbv0.3scaffold8110_7502-15089' '(at1g69180 : 159.0) Putative transcription factor with zinc finger and helix-loop-helix domains, the later similar to HMG boxes. Involved in specifying abaxial cell fate in the carpel. Four putative LFY binding sites (CCANTG) and two potential binding sites for MADS box proteins known as CArG boxes (CC(A/T)6GG) were found in the region spanning 3.8 Kb upstream of the CRC coding region.; CRABS CLAW (CRC); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT1G08465.1); Has 451 Blast hits to 449 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 437; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (q76ej0|yabdl_orysa : 131.0) Protein DROOPING LEAF - Oryza sativa (Rice) & (gnl|cdd|68268 : 116.0) no description available & (reliability: 318.0) & (original description: Putative CRC, Description = CRABS CLAW protein, PFAM = PF04690)' T '27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'nbv0.3scaffold8110_11061-15267' '(at1g69180 : 190.0) Putative transcription factor with zinc finger and helix-loop-helix domains, the later similar to HMG boxes. Involved in specifying abaxial cell fate in the carpel. Four putative LFY binding sites (CCANTG) and two potential binding sites for MADS box proteins known as CArG boxes (CC(A/T)6GG) were found in the region spanning 3.8 Kb upstream of the CRC coding region.; CRABS CLAW (CRC); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT1G08465.1); Has 451 Blast hits to 449 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 437; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (q76ej0|yabdl_orysa : 169.0) Protein DROOPING LEAF - Oryza sativa (Rice) & (gnl|cdd|68268 : 147.0) no description available & (reliability: 380.0) & (original description: Putative crc, Description = Crabs claw, PFAM = PF04690)' T '27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'nbv0.3scaffold57513_731-6575' '(at2g26580 : 181.0) YABBY5 (YAB5); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT1G08465.1); Has 458 Blast hits to 449 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 444; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|68268 : 151.0) no description available & (q7xim7|yab1_orysa : 119.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 362.0) & (original description: Putative YAB5, Description = Axial regulator YABBY 5, PFAM = PF04690)' T '27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'nbv0.5scaffold1854_5184-12365' '(gnl|cdd|68268 : 169.0) no description available & (at1g08465 : 157.0) Member of the YABBY family of Arabidopsis proteins involved in the abaxial cell fate specification in lateral organs; YABBY2 (YAB2); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: plant-specific transcription factor YABBY family protein (TAIR:AT2G26580.2); Has 446 Blast hits to 444 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 433; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (q7xim7|yab1_orysa : 133.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 314.0) & (original description: Putative YAB2, Description = Putative axial regulator YABBY 2, PFAM = PF04690)' T '27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'nbv0.5scaffold2364_92358-101299' '(at2g26580 : 191.0) YABBY5 (YAB5); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT1G08465.1); Has 458 Blast hits to 449 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 444; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|68268 : 161.0) no description available & (q7xim7|yab1_orysa : 128.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 382.0) & (original description: Putative YAB5, Description = Axial regulator YABBY 5, PFAM = PF04690)' T '27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'nbv0.5scaffold7608_17617-25204' '(at1g69180 : 159.0) Putative transcription factor with zinc finger and helix-loop-helix domains, the later similar to HMG boxes. Involved in specifying abaxial cell fate in the carpel. Four putative LFY binding sites (CCANTG) and two potential binding sites for MADS box proteins known as CArG boxes (CC(A/T)6GG) were found in the region spanning 3.8 Kb upstream of the CRC coding region.; CRABS CLAW (CRC); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT1G08465.1); Has 451 Blast hits to 449 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 437; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (q76ej0|yabdl_orysa : 129.0) Protein DROOPING LEAF - Oryza sativa (Rice) & (gnl|cdd|68268 : 115.0) no description available & (reliability: 318.0) & (original description: Putative crc, Description = CRABS CLAW protein, PFAM = PF04690)' T '27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'niben044scf00005843ctg001_627-5810' '(at2g26580 : 215.0) YABBY5 (YAB5); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT1G08465.1); Has 458 Blast hits to 449 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 444; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|68268 : 177.0) no description available & (q7xim7|yab1_orysa : 139.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 430.0) & (original description: Putative YAB5, Description = Axial regulator YABBY 5, PFAM = PF04690)' T '27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'niben044scf00024966ctg000_2310-9805' '(at2g26580 : 230.0) YABBY5 (YAB5); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT1G08465.1); Has 458 Blast hits to 449 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 444; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|68268 : 184.0) no description available & (q7xim7|yab1_orysa : 141.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 460.0) & (original description: Putative YAB5, Description = Axial regulator YABBY 5, PFAM = PF04690)' T '27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'niben044scf00031863ctg002_3192-7828' '(at1g23420 : 192.0) Essential for formation and asymmetric growth of the ovule outer integument. Member of the YABBY protein family of putative transcription factors that contain apparent Cys(2)-Cys(2) zinc-finger domains and regions of similarity to the high mobility group (HMG) transcription factors. INO may be required for polarity determination in the central part of the ovule.; INNER NO OUTER (INO); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: plant-specific transcription factor YABBY family protein (TAIR:AT2G26580.2); Has 465 Blast hits to 458 proteins in 128 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 444; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|68268 : 173.0) no description available & (q7xim7|yab1_orysa : 113.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 384.0) & (original description: Putative YAB4, Description = Axial regulator YABBY 4, PFAM = PF04690)' T '27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'niben044scf00039845ctg011_362-3517' '(at1g23420 : 190.0) Essential for formation and asymmetric growth of the ovule outer integument. Member of the YABBY protein family of putative transcription factors that contain apparent Cys(2)-Cys(2) zinc-finger domains and regions of similarity to the high mobility group (HMG) transcription factors. INO may be required for polarity determination in the central part of the ovule.; INNER NO OUTER (INO); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: plant-specific transcription factor YABBY family protein (TAIR:AT2G26580.2); Has 465 Blast hits to 458 proteins in 128 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 444; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|68268 : 176.0) no description available & (q7xim7|yab1_orysa : 117.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 380.0) & (original description: Putative YAB2, Description = Putative axial regulator YABBY 2, PFAM = PF04690)' T '27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'niben101scf00970_66704-76981' '(gnl|cdd|68268 : 182.0) no description available & (at2g26580 : 164.0) YABBY5 (YAB5); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT1G08465.1); Has 458 Blast hits to 449 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 444; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (q7xim7|yab1_orysa : 126.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 328.0) & (original description: Putative YAB2, Description = Putative axial regulator YABBY 2, PFAM = PF04690)' T '27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'niben101scf02112_193685-205829' '(at2g26580 : 211.0) YABBY5 (YAB5); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT1G08465.1); Has 458 Blast hits to 449 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 444; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|68268 : 180.0) no description available & (q7xim7|yab1_orysa : 138.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 422.0) & (original description: Putative YAB5, Description = Axial regulator YABBY 5, PFAM = PF04690)' T '27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'niben101scf03737_124951-134280' '(at2g26580 : 197.0) YABBY5 (YAB5); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT1G08465.1); Has 458 Blast hits to 449 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 444; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|68268 : 159.0) no description available & (q7xim7|yab1_orysa : 129.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 394.0) & (original description: Putative YAB5, Description = YABBY5-like protein, PFAM = PF04690;PF04690)' T '27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'niben101scf04287_469930-473908' '(at1g23420 : 189.0) Essential for formation and asymmetric growth of the ovule outer integument. Member of the YABBY protein family of putative transcription factors that contain apparent Cys(2)-Cys(2) zinc-finger domains and regions of similarity to the high mobility group (HMG) transcription factors. INO may be required for polarity determination in the central part of the ovule.; INNER NO OUTER (INO); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: plant-specific transcription factor YABBY family protein (TAIR:AT2G26580.2); Has 465 Blast hits to 458 proteins in 128 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 444; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|68268 : 175.0) no description available & (q7xim7|yab1_orysa : 115.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 378.0) & (original description: Putative YAB7, Description = Protein YABBY 7, PFAM = PF04690)' T '27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'niben101scf18484_211805-230236' '(at1g08465 : 203.0) Member of the YABBY family of Arabidopsis proteins involved in the abaxial cell fate specification in lateral organs; YABBY2 (YAB2); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: plant-specific transcription factor YABBY family protein (TAIR:AT2G26580.2); Has 446 Blast hits to 444 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 433; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|68268 : 198.0) no description available & (q7xim7|yab1_orysa : 158.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 406.0) & (original description: Putative YAB2, Description = Putative axial regulator YABBY 2, PFAM = PF04690)' T '27.3.10' 'RNA.regulation of transcription.C2C2(Zn) YABBY family' 'niben101scf25485_53248-58546' '(at1g69180 : 179.0) Putative transcription factor with zinc finger and helix-loop-helix domains, the later similar to HMG boxes. Involved in specifying abaxial cell fate in the carpel. Four putative LFY binding sites (CCANTG) and two potential binding sites for MADS box proteins known as CArG boxes (CC(A/T)6GG) were found in the region spanning 3.8 Kb upstream of the CRC coding region.; CRABS CLAW (CRC); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT1G08465.1); Has 451 Blast hits to 449 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 437; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (q76ej0|yabdl_orysa : 159.0) Protein DROOPING LEAF - Oryza sativa (Rice) & (gnl|cdd|68268 : 130.0) no description available & (reliability: 358.0) & (original description: Putative CRC1, Description = Crabs claw, PFAM = PF04690;PF04690)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold1639_125-3345' '(at4g35280 : 197.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G17180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative ZAT3, Description = Zinc finger protein ZAT3, PFAM = PF13912;PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold1856_9076-11858' '(at2g41940 : 130.0) Encodes a zinc finger protein containing only a single zinc finger.; zinc finger protein 8 (ZFP8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: trichome differentiation, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT3G58070.1); Has 1033 Blast hits to 1031 proteins in 54 species: Archae - 0; Bacteria - 9; Metazoa - 26; Fungi - 10; Plants - 958; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative ZFP8, Description = Zinc finger protein 8, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold3931_65454-68441' '(at1g34790 : 313.0) Encodes a zinc finger protein; involved in photomorphogenesis, flavonoid biosynthesis, flower and seed development.; transparent testa 1 (TT1); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: WIP domain protein 5 (TAIR:AT1G51220.1); Has 15538 Blast hits to 10276 proteins in 169 species: Archae - 0; Bacteria - 0; Metazoa - 14379; Fungi - 110; Plants - 685; Viruses - 0; Other Eukaryotes - 364 (source: NCBI BLink). & (reliability: 626.0) & (original description: Putative TT1, Description = Protein TRANSPARENT TESTA 1, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold4918_52694-55425' '(at1g66140 : 135.0) Encodes a zinc finger protein containing only a single zinc finger.; zinc finger protein 4 (ZFP4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 7 (TAIR:AT1G24625.1); Has 1119 Blast hits to 1118 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 4; Plants - 1103; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative C2H2L1, Description = C2H2L domain class transcription factor, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold6521_42940-54290' '(at1g30970 : 220.0) Encodes SUF4 (SUPPRESSOR of FRI 4), a putative zinc-finger-containing transcription factor that is required for delayed flowering in winter-annual Arabidopsis. suf4 mutations strongly suppress the late-flowering phenotype of FRI (FRIGIDA) mutants. suf4 mutants also show reduced H3K4 trimethylation at FLC (FLOWERING LOCUS C), a floral inhibitor. SUF4 may act to specifically recruit a putative histone H3 methyltransferase EFS (EARLY FLOWERING IN SHORT DAYS) and the PAF1-like complex to the FLC locus.; suppressor of FRIGIDA4 (SUF4); FUNCTIONS IN: DNA binding, protein homodimerization activity, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: histone H3-K4 methylation, negative regulation of flower development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 20927 Blast hits to 14395 proteins in 967 species: Archae - 31; Bacteria - 3069; Metazoa - 8441; Fungi - 3219; Plants - 3230; Viruses - 675; Other Eukaryotes - 2262 (source: NCBI BLink). & (gnl|cdd|38104 : 122.0) no description available & (reliability: 440.0) & (original description: Putative SUF4, Description = C2H2-type zinc finger protein, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold9684_43222-46160' '(at5g04390 : 147.0) C2H2-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G10470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative EPF1, Description = DNA-binding protein, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold12126_2830-38684' '(at2g01540 : 209.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G70790.1); Has 3447 Blast hits to 2959 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 1768; Fungi - 600; Plants - 764; Viruses - 0; Other Eukaryotes - 315 (source: NCBI BLink). & (gnl|cdd|36248 : 195.0) no description available & (gnl|cdd|84577 : 80.8) no description available & (reliability: 386.0) & (original description: Putative CAR7, Description = Protein C2-DOMAIN ABA-RELATED 7, PFAM = PF00168)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold17726_8538-12837' '(at5g54630 : 129.0) zinc finger protein-related; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT4G27240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative mrpi1, Description = C2H2-like zinc finger protein, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold19108_31890-34711' '(at1g02040 : 108.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G17180.1); Has 5502 Blast hits to 3522 proteins in 286 species: Archae - 2; Bacteria - 120; Metazoa - 2284; Fungi - 460; Plants - 1034; Viruses - 242; Other Eukaryotes - 1360 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative At1g02040, Description = PEThy, PFAM = PF13912;PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold19709_28017-31054' '(at2g28200 : 141.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G04390.1); Has 1824 Blast hits to 1700 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 861; Fungi - 12; Plants - 927; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative C2H2L6, Description = C2H2L domain class transcription factor, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold21321_17748-28611' '(at4g21160 : 476.0) ADP-ribosylation factor GTPase-activating protein containing zinc finger and C2 domains and a novel PI-3-P-binding protein region. Binds PI-3-P. Highest expression levels in flowering tissue, rosettes and roots. A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ZAC; FUNCTIONS IN: phospholipid binding, ARF GTPase activator activity; INVOLVED IN: intracellular protein transport; LOCATED IN: Golgi apparatus, plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 13 (TAIR:AT4G05330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36248 : 193.0) no description available & (gnl|cdd|85433 : 145.0) no description available & (reliability: 952.0) & (original description: Putative AGD12, Description = ADP-ribosylation factor GTPase-activating protein AGD12, PFAM = PF01412;PF00168)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold22377_3374-7703' '(at5g66350 : 194.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.; SHORT INTERNODES (SHI); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68707 : 180.0) no description available & (reliability: 380.0) & (original description: Putative SHI, Description = Expression of terpenoids 1, PFAM = PF05142)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold22797_1-2553' '(at2g28200 : 142.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G04390.1); Has 1824 Blast hits to 1700 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 861; Fungi - 12; Plants - 927; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (q42430|zfp1_wheat : 80.5) Zinc-finger protein 1 (WZF1) - Triticum aestivum (Wheat) & (reliability: 284.0) & (original description: Putative ZFP6, Description = C2H2-type zinc finger protein 6, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold25246_24167-27555' '(at1g75520 : 166.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|68707 : 162.0) no description available & (reliability: 332.0) & (original description: Putative SRS3, Description = Protein SHI RELATED SEQUENCE 3, PFAM = PF05142)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold26608_16496-27103' '(at1g43850 : 458.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 916.0) & (original description: Putative SEU, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold28094_3099-7188' '(at5g03150 : 317.0) JKD is a nuclear-localized putative transcription factor with three zinc finger domains. jkd mutants show a number of root patterning defects including ectopic periclinal divisions in the cortex, increased cell numbers in the cortical and epidermal layers, a disrupted QC marker expression pattern, and disorganized QC and columella cells. jkd mutants also have a reduced number of meristematic cells in their roots. JKD can interact with the SCR and SHR proteins implicated in root patterning, as well as another zinc finger transcription factor, MAGPIE. All of these interactions require the first zinc finger in JKD according to a Y2H assay. There are also transcriptional interactions among these proteins. The initiation of JKD transcription does not appear to depend on SCR and SHR, but later expression in the post-embryonic QC cells and ground tissue initials is reduced in scr and shr mutants. JKD also appears to be required for SCR transcription beginning in the embryo. There is also some evidence that JKD plays a role in promoting the movement of SHR into the nucleus, particularly in QC cells, but this may be indirect.; JACKDAW (JKD); FUNCTIONS IN: protein binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of epidermal cell differentiation, regulation of meristem growth, regulation of cell division, root development, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G66730.1); Has 56579 Blast hits to 20803 proteins in 357 species: Archae - 0; Bacteria - 66; Metazoa - 49427; Fungi - 692; Plants - 856; Viruses - 6; Other Eukaryotes - 5532 (source: NCBI BLink). & (reliability: 634.0) & (original description: Putative NUC, Description = Zinc finger protein NUTCRACKER, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold29554_12821-15264' '(at2g37430 : 105.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: cotyledon, root, petiole; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G53600.1); Has 5065 Blast hits to 4182 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 4138; Fungi - 12; Plants - 806; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative ZFP4, Description = C2H2-type zinc finger protein 4, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold29554_12833-15261' '(at3g53600 : 89.4) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT2G37430.1); Has 959 Blast hits to 927 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 2; Plants - 801; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative zct1, Description = Zinc finger protein ZAT11, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold30928_8528-11748' '(at4g35280 : 197.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G17180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative DAZ2, Description = Zinc finger protein ZAT3, PFAM = PF13912;PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold32151_5466-9996' '(at3g57670 : 378.0) NO TRANSMITTING TRACT (NTT); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: WIP domain protein 4 (TAIR:AT3G20880.1); Has 16303 Blast hits to 11155 proteins in 263 species: Archae - 2; Bacteria - 36; Metazoa - 14565; Fungi - 231; Plants - 853; Viruses - 60; Other Eukaryotes - 556 (source: NCBI BLink). & (reliability: 756.0) & (original description: Putative WIP2, Description = Zinc finger protein WIP2, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold32470_16556-25249' '(at2g47850 : 369.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1); Has 1724 Blast hits to 1003 proteins in 159 species: Archae - 0; Bacteria - 7; Metazoa - 368; Fungi - 218; Plants - 971; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (q5naw2|zfnl1_orysa : 346.0) Zinc finger CCCH domain-containing protein ZFN-like 1 - Oryza sativa (Rice) & (gnl|cdd|36890 : 103.0) no description available & (reliability: 680.0) & (original description: Putative Os01g0258700, Description = Zinc finger CCCH domain-containing protein 6, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold32782_1-2728' '(at1g26610 : 141.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT1G26590.1); Has 2336 Blast hits to 2002 proteins in 123 species: Archae - 0; Bacteria - 1; Metazoa - 1559; Fungi - 9; Plants - 678; Viruses - 6; Other Eukaryotes - 83 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative ZFP4, Description = ZPT4-4, PFAM = PF13912;PF13912;PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold35057_4402-10124' '(at5g63280 : 310.0) C2H2-like zinc finger protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT5G40710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 594.0) & (original description: Putative C2H2L3, Description = C2H2L domain class transcription factor, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold37692_16033-19670' '(at1g26610 : 129.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT1G26590.1); Has 2336 Blast hits to 2002 proteins in 123 species: Archae - 0; Bacteria - 1; Metazoa - 1559; Fungi - 9; Plants - 678; Viruses - 6; Other Eukaryotes - 83 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative PGSC0003DMG400002817, Description = ZPT4-2, PFAM = PF13912;PF13912;PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold43325_12167-16457' '(at2g01940 : 363.0) May be involved in an early event in shoot gravitropism such as gravity perception and/or a signaling process subsequent to amyloplast sedimentation as a putative transcription factor in gravity-perceptive cells.; SHOOT GRAVITROPISM 5 (SGR5); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 14 (TAIR:AT1G68130.1); Has 13187 Blast hits to 8766 proteins in 255 species: Archae - 0; Bacteria - 0; Metazoa - 12025; Fungi - 55; Plants - 746; Viruses - 1; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 726.0) & (original description: Putative SGR5, Description = Protein SHOOT GRAVITROPISM 5, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold44052_12383-17349' '(at3g13810 : 313.0) indeterminate(ID)-domain 11 (IDD11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 7 (TAIR:AT1G55110.1). & (reliability: 626.0) & (original description: Putative C2H2L12, Description = C2H2L domain class transcription factor, PFAM = PF12171)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold44626_4292-17050' '(at2g02070 : 282.0) indeterminate(ID)-domain 5 (IDD5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 4 (TAIR:AT2G02080.1); Has 61158 Blast hits to 25844 proteins in 587 species: Archae - 8; Bacteria - 480; Metazoa - 52168; Fungi - 1154; Plants - 982; Viruses - 10; Other Eukaryotes - 6356 (source: NCBI BLink). & (reliability: 564.0) & (original description: Putative IDD5, Description = Protein indeterminate-domain 5, chloroplastic, PFAM = PF12171)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold44998_434-15459' '(at2g27100 : 596.0) Identified as a leaf form mutant by Redei having serrated leaves. Further analysis of the single loss of function allele indicated pleiotropic effects extending to many aspects of shoot development such as taller meristems, alterations in phase transition, phyllotaxy and branching. Encodes a single zinc finger containing protein that is expressed in meristems and organ primordia.; SERRATE (SE); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: cytosol, nuclear speck, nucleolus, nucleus, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Arsenite-resistance protein 2 (InterPro:IPR007042), Protein of unknown function DUF3546 (InterPro:IPR021933), Zinc finger, C2H2-type (InterPro:IPR007087); Has 5797 Blast hits to 4596 proteins in 474 species: Archae - 2; Bacteria - 583; Metazoa - 2822; Fungi - 981; Plants - 712; Viruses - 137; Other Eukaryotes - 560 (source: NCBI BLink). & (gnl|cdd|37506 : 340.0) no description available & (reliability: 1192.0) & (original description: Putative SE, Description = Serrate RNA effector molecule, PFAM = PF04959;PF12066)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold47578_8942-12425' '(at1g13290 : 318.0) Encodes a putative zinc finger protein (C2H2 family, type IIIA, subclass A1d) that has a WIP domain. Seedlings with mutations in DOT5 have a misaligned venation defect in their leaves and cotyledons. Additional developmental abnormalities, such as elongated petioles and aberrant phyllotaxy suggest that DOT5 is required for normal shoot and root development.; DEFECTIVELY ORGANIZED TRIBUTARIES 5 (DOT5); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G57670.1); Has 7460 Blast hits to 6100 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 6553; Fungi - 59; Plants - 690; Viruses - 0; Other Eukaryotes - 158 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative DOT5, Description = Protein TRANSPARENT TESTA 1, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold48088_3540-6781' '(at5g04390 : 133.0) C2H2-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G10470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative EPF1, Description = C2H2-type zinc finger family protein, putative, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold49267_2490-6299' '(at3g45260 : 298.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G60470.1); Has 54288 Blast hits to 20581 proteins in 284 species: Archae - 0; Bacteria - 7; Metazoa - 49362; Fungi - 343; Plants - 724; Viruses - 2; Other Eukaryotes - 3850 (source: NCBI BLink). & (reliability: 596.0) & (original description: Putative IDD4, Description = Protein indeterminate-domain 4, chloroplastic, PFAM = PF12171)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold50135_3470-8815' '(at5g66350 : 208.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.; SHORT INTERNODES (SHI); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68707 : 189.0) no description available & (reliability: 398.0) & (original description: Putative SRS1, Description = Protein SHI RELATED SEQUENCE 1, PFAM = PF05142)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold62127_2920-11321' '(at1g43850 : 564.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1128.0) & (original description: Putative M7J2, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold63800_7415-10407' '(at3g14740 : 305.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36173 : 182.0) no description available & (gnl|cdd|34742 : 148.0) no description available & (reliability: 610.0) & (original description: Putative BnaC05g38850D, Description = BnaC05g38850D protein, PFAM = PF00628;PF13832)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold63979_5484-8551' '(at5g04390 : 157.0) C2H2-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G10470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative glysoja_008251, Description = Zinc finger protein ZAT5, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold68345_5784-9510' '(gnl|cdd|68707 : 197.0) no description available & (at3g51060 : 187.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative LRP1, Description = BnaC01g31760D protein, PFAM = PF05142)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold77102_213-2597' '(at3g28210 : 156.0) Encodes a putative zinc finger protein (PMZ).; PMZ; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to abscisic acid stimulus, response to chitin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type, AN1-like) family protein (TAIR:AT2G41835.1); Has 518 Blast hits to 511 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 257; Fungi - 120; Plants - 80; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|38393 : 125.0) no description available & (reliability: 312.0) & (original description: Putative SAP12, Description = Zinc finger AN1 domain-containing stress-associated protein 12, PFAM = PF01428;PF01428)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold77729_3731-6438' '(at3g23130 : 91.7) Flower-specific gene controlling the boundary of the stamen and carpel whorls. Similar to zinc finger transcription factors.; SUPERMAN (SUP); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: flower development, negative regulation of transcription, specification of floral organ identity; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 11 (TAIR:AT2G42410.1); Has 1049 Blast hits to 1049 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 37; Fungi - 0; Plants - 1011; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative SUP, Description = Superman, PFAM = PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold78059_4088-7550' '(at5g66730 : 289.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 2 (TAIR:AT3G50700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 578.0) & (original description: Putative IDD1, Description = Protein indeterminate-domain 1, PFAM = PF00096)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold78275_700-4769' '(at1g55110 : 318.0) indeterminate(ID)-domain 7 (IDD7); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 11 (TAIR:AT3G13810.1); Has 54650 Blast hits to 21530 proteins in 476 species: Archae - 0; Bacteria - 0; Metazoa - 51826; Fungi - 384; Plants - 807; Viruses - 2; Other Eukaryotes - 1631 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative C2H2L12, Description = C2H2L domain class transcription factor, PFAM = PF00096)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold82210_600-5398' '(at1g75710 : 285.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein-related (TAIR:AT5G54630.1); Has 773 Blast hits to 521 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 59; Fungi - 55; Plants - 387; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink). & (reliability: 570.0) & (original description: Putative mrpi2, Description = C2H2-like zinc finger protein, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold88653_632-5259' '(at3g51060 : 193.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|68707 : 189.0) no description available & (reliability: 386.0) & (original description: Putative LRP1, Description = Expression of terpenoids 1, PFAM = PF05142)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold91200_2111-5248' '(at1g75520 : 206.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|68707 : 190.0) no description available & (reliability: 412.0) & (original description: Putative SRS7, Description = Protein SHI RELATED SEQUENCE 7, PFAM = PF05142)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold94084_1486-4421' '(at4g35280 : 164.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G17180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative ZAT3, Description = Zinc finger protein ZAT3, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold97774_1-4162' '(at1g03840 : 285.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 570.0) & (original description: Putative MdZF1, Description = Zinc finger protein, PFAM = PF00096)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.3scaffold98572_2298-4216' '(at3g02790 : 112.0) zinc finger (C2H2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT5G16470.1); Has 86 Blast hits to 86 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative At5g16470, Description = At5g16470, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold83_311729-369573' '(at2g37430 : 97.1) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: cotyledon, root, petiole; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G53600.1); Has 5065 Blast hits to 4182 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 4138; Fungi - 12; Plants - 806; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative zct1, Description = Zinc finger protein ZAT11, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold133_304913-309475' '(at1g03840 : 327.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 654.0) & (original description: Putative ENY, Description = Zinc finger protein MAGPIE, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold341_6778-10467' '(gnl|cdd|68707 : 185.0) no description available & (at3g51060 : 181.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative LRP1, Description = BnaC01g31760D protein, PFAM = PF05142;PF05142)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold1076_149717-153062' '(gnl|cdd|68707 : 161.0) no description available & (at5g66350 : 157.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.; SHORT INTERNODES (SHI); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative SRS3, Description = Protein SHI RELATED SEQUENCE 3, PFAM = PF05142)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold1375_225741-229039' '(at5g52010 : 454.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT4G12240.1); Has 70 Blast hits to 70 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 65; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 908.0) & (original description: Putative At5g52010, Description = AT5g52010/MSG15_9, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold1412_438929-441738' '(at1g27730 : 118.0) Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress.; salt tolerance zinc finger (STZ); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger of Arabidopsis thaliana 6 (TAIR:AT5G04340.1); Has 5350 Blast hits to 3982 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 4198; Fungi - 48; Plants - 937; Viruses - 0; Other Eukaryotes - 167 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative zfp, Description = Osmotic stress-induced zinc-finger protein, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold1563_7947-12572' '(at1g72050 : 277.0) Encodes a transcriptional factor TFIIIA required for transcription of 5S rRNA gene. 5S rRNA is the smallest constituent of the ribosome. Work on one of the gene models AT1G72050.2 showed that it encodes a protein with nine Cys(2)-His(2)-type zinc fingers, a characteristic feature of TFIIIA proteins. AT1G72050.2 also contains a 23 amino acid spacer between fingers 1 and 2, a 66 amino acid spacer between fingers 4 and 5, and a 50 amino acid non-finger C-terminal tail. in vitro assay demonstrated that AT1g72050.2 binds to 5S rDNA and efficiently stimulates the transcription of 5S rRNA. AT1g72050.2 also binds to 5S rRNA in vitro. AT1g72050.2 is located at several nuclear foci including the nucleolus and is absent from the cytoplasm.; transcription factor IIIA (TFIIIA); FUNCTIONS IN: 5S rRNA binding, zinc ion binding, sequence-specific DNA binding transcription factor activity, 5S rDNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, C2H2-type/integrase, DNA-binding (InterPro:IPR013087); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 554.0) & (original description: Putative TFIIIA, Description = Transcription factor IIIA, PFAM = PF00096;PF00096;PF00096;PF12874)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold1703_208059-212313' '(at5g66730 : 273.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 2 (TAIR:AT3G50700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 546.0) & (original description: Putative MdZF1, Description = Zinc finger protein, PFAM = PF00096)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold2144_351967-355386' '(at3g51060 : 213.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|68707 : 193.0) no description available & (reliability: 426.0) & (original description: Putative SHI, Description = Protein SHORT INTERNODES, PFAM = PF05142)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold2147_204903-208033' '(at1g34370 : 241.0) Encodes a putative nuclear Cys(2)His(2)-type zinc finger protein involved in H+ and Al3+ rhizotoxicity. In mutants exposed to aluminum stress, there is no induction of AtALMT1, an malate transporter known to be involved in the mediation of aluminum toxicity.; sensitive to proton rhizotoxicity 1 (STOP1); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G22890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative C2H35, Description = Protein SENSITIVE TO PROTON RHIZOTOXICITY 1, PFAM = PF00096)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold2426_129619-137406' '(at4g31420 : 392.0) Zinc finger protein 622; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: Zinc finger protein 622 (TAIR:AT2G24500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37996 : 275.0) no description available & (reliability: 784.0) & (original description: Putative REIL1, Description = Cytoplasmic 60S subunit biogenesis factor REI1 homolog 1, PFAM = PF12756;PF12171)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold2603_51361-58671' '(gnl|cdd|68707 : 164.0) no description available & (at1g75520 : 156.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative LRP1, Description = BnaC01g31760D protein, PFAM = PF05142)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold3214_219388-258324' '(at2g37430 : 106.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: cotyledon, root, petiole; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G53600.1); Has 5065 Blast hits to 4182 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 4138; Fungi - 12; Plants - 806; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative ZFP4, Description = C2H2-type zinc finger protein 4, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold3568_165401-168642' '(at5g04390 : 133.0) C2H2-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G10470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative EPF1, Description = C2H2-type zinc finger family protein, putative, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold4171_191216-193677' '(at4g35280 : 160.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G17180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative DAZ1, Description = Zinc finger protein ZAT3, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold4231_359169-362785' '(at3g14740 : 307.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36173 : 174.0) no description available & (gnl|cdd|34742 : 145.0) no description available & (reliability: 614.0) & (original description: Putative BnaA05g24820D, Description = BnaA05g24820D protein, PFAM = PF13832;PF00628)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold4542_7536-10243' '(at3g23130 : 91.7) Flower-specific gene controlling the boundary of the stamen and carpel whorls. Similar to zinc finger transcription factors.; SUPERMAN (SUP); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: flower development, negative regulation of transcription, specification of floral organ identity; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 11 (TAIR:AT2G42410.1); Has 1049 Blast hits to 1049 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 37; Fungi - 0; Plants - 1011; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative SUP, Description = Transcriptional regulator SUPERMAN, PFAM = PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold5058_20454-22939' '(at2g28710 : 117.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G59820.1); Has 1339 Blast hits to 1281 proteins in 119 species: Archae - 0; Bacteria - 0; Metazoa - 497; Fungi - 0; Plants - 827; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative ZFP2, Description = Two zinc finger transport-like protein, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold5058_20805-22945' '(at2g28710 : 127.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G59820.1); Has 1339 Blast hits to 1281 proteins in 119 species: Archae - 0; Bacteria - 0; Metazoa - 497; Fungi - 0; Plants - 827; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative zct2, Description = Zinc finger DNA-binding protein, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold5970_44229-53880' '(at5g20220 : 412.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, zinc ion binding, nucleic acid binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 3073 Blast hits to 2296 proteins in 256 species: Archae - 0; Bacteria - 10; Metazoa - 639; Fungi - 640; Plants - 331; Viruses - 1155; Other Eukaryotes - 298 (source: NCBI BLink). & (reliability: 824.0) & (original description: Putative BnaA10g15210D, Description = BnaA10g15210D protein, PFAM = PF00098)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold6181_34923-54861' '(at1g43850 : 488.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 976.0) & (original description: Putative SEU, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold7887_6079-10525' '(at1g68480 : 124.0) Encodes a putative zinc finger transcription factor that is necessary for proper lateral organ shape and is sufficient to induce the proliferation of lateral organ tissue. Together with NUB, it is involved in stamen and carpel development.; JAGGED (JAG); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT1G13400.1); Has 723 Blast hits to 723 proteins in 72 species: Archae - 0; Bacteria - 6; Metazoa - 56; Fungi - 19; Plants - 626; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative JAG, Description = Zinc finger protein JAGGED, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold8033_37731-49920' '(at2g23740 : 1299.0) nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: chromatin modification; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), SET domain (InterPro:IPR001214), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 5 (TAIR:AT2G35160.1). & (gnl|cdd|36298 : 174.0) no description available & (gnl|cdd|85073 : 131.0) no description available & (reliability: 2598.0) & (original description: Putative SUVR5, Description = Histone-lysine N-methyltransferase SUVR5, PFAM = PF05033;PF00856)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'nbv0.5scaffold9022_896-4143' '(at2g02080 : 253.0) indeterminate(ID)-domain 4 (IDD4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT1G14580.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative IDD4, Description = Zinc finger protein MAGPIE, PFAM = PF12171)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00000550ctg009_1-2386' '(at1g27730 : 171.0) Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress.; salt tolerance zinc finger (STZ); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger of Arabidopsis thaliana 6 (TAIR:AT5G04340.1); Has 5350 Blast hits to 3982 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 4198; Fungi - 48; Plants - 937; Viruses - 0; Other Eukaryotes - 167 (source: NCBI BLink). & (q42430|zfp1_wheat : 102.0) Zinc-finger protein 1 (WZF1) - Triticum aestivum (Wheat) & (reliability: 342.0) & (original description: Putative AZF3, Description = Zinc finger protein AZF3, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00000711ctg007_3838-6269' '(at2g28710 : 105.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G59820.1); Has 1339 Blast hits to 1281 proteins in 119 species: Archae - 0; Bacteria - 0; Metazoa - 497; Fungi - 0; Plants - 827; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative ZFP2, Description = Two zinc finger transport-like protein, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00001096ctg028_25353-29915' '(at1g03840 : 327.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 654.0) & (original description: Putative ENY, Description = Zinc finger protein MAGPIE, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00001423ctg008_14101-18400' '(at1g75710 : 276.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein-related (TAIR:AT5G54630.1); Has 773 Blast hits to 521 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 59; Fungi - 55; Plants - 387; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink). & (reliability: 552.0) & (original description: Putative mrpi1, Description = C2H2-like zinc finger protein, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00001815ctg005_9836-15758' '(at3g07940 : 468.0) Calcium-dependent ARF-type GTPase activating protein family; FUNCTIONS IN: ARF GTPase activator activity, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent ARF-type GTPase activating protein family (TAIR:AT4G21160.4); Has 9376 Blast hits to 8361 proteins in 305 species: Archae - 0; Bacteria - 0; Metazoa - 5295; Fungi - 1386; Plants - 1701; Viruses - 0; Other Eukaryotes - 994 (source: NCBI BLink). & (gnl|cdd|36248 : 187.0) no description available & (gnl|cdd|85433 : 135.0) no description available & (reliability: 936.0) & (original description: Putative AGD11, Description = Probable ADP-ribosylation factor GTPase-activating protein AGD11, PFAM = PF01412;PF00168)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00003916ctg010_921-4870' '(at1g55110 : 306.0) indeterminate(ID)-domain 7 (IDD7); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 11 (TAIR:AT3G13810.1); Has 54650 Blast hits to 21530 proteins in 476 species: Archae - 0; Bacteria - 0; Metazoa - 51826; Fungi - 384; Plants - 807; Viruses - 2; Other Eukaryotes - 1631 (source: NCBI BLink). & (reliability: 612.0) & (original description: Putative C2H2L12, Description = C2H2L domain class transcription factor, PFAM = PF00096)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00005938ctg010_4179-6793' '(at5g06070 : 80.9) Isolated as a mutation defective in petal development with specific effects on adaxial petals which are filamentous or absent. Encodes a Superman (SUP) like protein with zinc finger motifs. Transcript is detected in petal primordia and protein is localized to the nucleus.; RABBIT EARS (RBE); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc-finger protein 10 (TAIR:AT2G37740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative RBE, Description = Palmate-like pentafoliata 1 transcription factor, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00006054ctg001_475-4774' '(at5g66730 : 291.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 2 (TAIR:AT3G50700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 582.0) & (original description: Putative IDD1, Description = Protein indeterminate-domain 1, PFAM = PF00096)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00006248ctg002_2070-6387' '(at5g66730 : 278.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 2 (TAIR:AT3G50700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 556.0) & (original description: Putative MdZF1, Description = Zinc finger protein, PFAM = PF00096)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00007956ctg009_328-3383' '(at2g37740 : 97.4) zinc-finger protein 10 (ZFP10); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G06070.1); Has 808 Blast hits to 808 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 799; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 194.8) & (original description: Putative SUP12, Description = Transcriptional regulator superman, PFAM = PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00008252ctg008_32613-37200' '(at1g08290 : 334.0) WIP domain protein 3 (WIP3); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: WIP domain protein 5 (TAIR:AT1G51220.1); Has 40394 Blast hits to 17903 proteins in 213 species: Archae - 0; Bacteria - 0; Metazoa - 38493; Fungi - 119; Plants - 685; Viruses - 0; Other Eukaryotes - 1097 (source: NCBI BLink). & (reliability: 668.0) & (original description: Putative WIP3, Description = Zinc finger protein WIP3, PFAM = PF12874)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00008615ctg001_64959-68009' '(at1g34370 : 224.0) Encodes a putative nuclear Cys(2)His(2)-type zinc finger protein involved in H+ and Al3+ rhizotoxicity. In mutants exposed to aluminum stress, there is no induction of AtALMT1, an malate transporter known to be involved in the mediation of aluminum toxicity.; sensitive to proton rhizotoxicity 1 (STOP1); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G22890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative C2H35, Description = Protein SENSITIVE TO PROTON RHIZOTOXICITY 1, PFAM = PF00096)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00009719ctg005_3033-6022' '(at1g02030 : 94.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT3G60580.1); Has 3215 Blast hits to 2725 proteins in 143 species: Archae - 0; Bacteria - 4; Metazoa - 2130; Fungi - 20; Plants - 967; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative PGSC0003DMG400004763, Description = C2H2-like zinc finger protein, putative, PFAM = PF13912;PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00011335ctg004_13705-24184' '(at1g43850 : 473.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 946.0) & (original description: Putative SEU, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00012545ctg009_117-3564' '(at3g51060 : 210.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|68707 : 204.0) no description available & (reliability: 420.0) & (original description: Putative SHI, Description = Protein SHORT INTERNODES, PFAM = PF05142)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00012684ctg002_1218-4106' '(at5g25160 : 81.3) Encodes a zinc finger protein containing only a single zinc finger.; zinc finger protein 3 (ZFP3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: shoot apex, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G10970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative PGSC0003DMG400022777, Description = Zinc finger family protein, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00013428ctg001_7525-10443' '(gnl|cdd|68707 : 198.0) no description available & (at3g51060 : 186.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative LRP1, Description = BnaC01g31760D protein, PFAM = PF05142)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00013563ctg004_1827-5574' '(at5g54630 : 459.0) zinc finger protein-related; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT4G27240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 898.0) & (original description: Putative mrpi2, Description = C2H2-like zinc finger protein, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00014030ctg030_3788-10885' '(gnl|cdd|68707 : 102.0) no description available & (at5g66350 : 89.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.; SHORT INTERNODES (SHI); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative LRP1, Description = Expression of terpenoids 1, PFAM = PF05142)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00014088ctg010_3115-5559' '(at2g37430 : 106.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: cotyledon, root, petiole; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G53600.1); Has 5065 Blast hits to 4182 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 4138; Fungi - 12; Plants - 806; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative ZFP2, Description = Two zinc finger transport-like protein, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00014918ctg012_3276-5731' '(at5g57520 : 82.0) Encodes a zinc finger protein containing only a single zinc finger.; zinc finger protein 2 (ZFP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 7 (TAIR:AT1G24625.1); Has 1032 Blast hits to 1032 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1032; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative ZFP2, Description = Zinc finger protein 2, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00015388ctg016_7755-10604' '(gnl|cdd|68707 : 209.0) no description available & (at3g51060 : 187.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative SRS5, Description = Protein SHI RELATED SEQUENCE 5, PFAM = PF05142)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00015595ctg016_4062-8215' '(at3g57670 : 380.0) NO TRANSMITTING TRACT (NTT); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: WIP domain protein 4 (TAIR:AT3G20880.1); Has 16303 Blast hits to 11155 proteins in 263 species: Archae - 2; Bacteria - 36; Metazoa - 14565; Fungi - 231; Plants - 853; Viruses - 60; Other Eukaryotes - 556 (source: NCBI BLink). & (reliability: 760.0) & (original description: Putative WIP5, Description = Zinc finger protein WIP5, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00017501ctg006_4273-7258' '(at1g27730 : 157.0) Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress.; salt tolerance zinc finger (STZ); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger of Arabidopsis thaliana 6 (TAIR:AT5G04340.1); Has 5350 Blast hits to 3982 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 4198; Fungi - 48; Plants - 937; Viruses - 0; Other Eukaryotes - 167 (source: NCBI BLink). & (q42430|zfp1_wheat : 101.0) Zinc-finger protein 1 (WZF1) - Triticum aestivum (Wheat) & (reliability: 314.0) & (original description: Putative zfp, Description = Osmotic stress-induced zinc-finger protein, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00017572ctg022_1-4415' '(at2g01940 : 261.0) May be involved in an early event in shoot gravitropism such as gravity perception and/or a signaling process subsequent to amyloplast sedimentation as a putative transcription factor in gravity-perceptive cells.; SHOOT GRAVITROPISM 5 (SGR5); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 14 (TAIR:AT1G68130.1); Has 13187 Blast hits to 8766 proteins in 255 species: Archae - 0; Bacteria - 0; Metazoa - 12025; Fungi - 55; Plants - 746; Viruses - 1; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 522.0) & (original description: Putative BnaA09g54430D, Description = BnaA09g54430D protein, PFAM = PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00021234ctg001_3574-6405' '(at3g60580 : 153.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G45120.1); Has 2639 Blast hits to 2349 proteins in 138 species: Archae - 0; Bacteria - 0; Metazoa - 1624; Fungi - 13; Plants - 935; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative ZAT9, Description = Zinc finger protein ZAT9, PFAM = PF13912;PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00029762ctg002_4781-7434' '(at1g68360 : 144.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 6 (TAIR:AT1G67030.1); Has 1137 Blast hits to 1135 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 1124; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative Gl-3, Description = Multicellular trichome development C2H2 zinc finger transcription factor, PFAM = PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00032930ctg009_224-3156' '(at2g28200 : 135.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G04390.1); Has 1824 Blast hits to 1700 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 861; Fungi - 12; Plants - 927; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative ZAT5, Description = Zinc finger protein ZAT5, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00037501ctg003_5291-8652' '(at2g45120 : 94.4) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT3G60580.1); Has 2765 Blast hits to 2574 proteins in 176 species: Archae - 0; Bacteria - 8; Metazoa - 1573; Fungi - 69; Plants - 926; Viruses - 18; Other Eukaryotes - 171 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative PGSC0003DMG400024550, Description = ZPT4-4, PFAM = PF13912;PF13912;PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00039328ctg002_15905-21139' '(at3g57670 : 329.0) NO TRANSMITTING TRACT (NTT); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: WIP domain protein 4 (TAIR:AT3G20880.1); Has 16303 Blast hits to 11155 proteins in 263 species: Archae - 2; Bacteria - 36; Metazoa - 14565; Fungi - 231; Plants - 853; Viruses - 60; Other Eukaryotes - 556 (source: NCBI BLink). & (reliability: 658.0) & (original description: Putative WIP2, Description = Zinc finger protein WIP2, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00047135ctg001_351-2467' '(at5g54630 : 176.0) zinc finger protein-related; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT4G27240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative mrpi1, Description = C2H2 zinc finger protein, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00047378ctg000_459-15433' '(at2g27100 : 618.0) Identified as a leaf form mutant by Redei having serrated leaves. Further analysis of the single loss of function allele indicated pleiotropic effects extending to many aspects of shoot development such as taller meristems, alterations in phase transition, phyllotaxy and branching. Encodes a single zinc finger containing protein that is expressed in meristems and organ primordia.; SERRATE (SE); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: cytosol, nuclear speck, nucleolus, nucleus, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Arsenite-resistance protein 2 (InterPro:IPR007042), Protein of unknown function DUF3546 (InterPro:IPR021933), Zinc finger, C2H2-type (InterPro:IPR007087); Has 5797 Blast hits to 4596 proteins in 474 species: Archae - 2; Bacteria - 583; Metazoa - 2822; Fungi - 981; Plants - 712; Viruses - 137; Other Eukaryotes - 560 (source: NCBI BLink). & (gnl|cdd|37506 : 343.0) no description available & (reliability: 1236.0) & (original description: Putative SE, Description = Serrate RNA effector molecule, PFAM = PF12066;PF04959)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00050140ctg000_1-2245' '(at1g27730 : 157.0) Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress.; salt tolerance zinc finger (STZ); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger of Arabidopsis thaliana 6 (TAIR:AT5G04340.1); Has 5350 Blast hits to 3982 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 4198; Fungi - 48; Plants - 937; Viruses - 0; Other Eukaryotes - 167 (source: NCBI BLink). & (q42430|zfp1_wheat : 112.0) Zinc-finger protein 1 (WZF1) - Triticum aestivum (Wheat) & (reliability: 314.0) & (original description: Putative zfp, Description = Osmotic stress-induced zinc-finger protein, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00054677ctg002_12663-17629' '(at3g13810 : 292.0) indeterminate(ID)-domain 11 (IDD11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 7 (TAIR:AT1G55110.1). & (reliability: 584.0) & (original description: Putative C2H2L12, Description = C2H2L domain class transcription factor, PFAM = PF12171)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00057002ctg001_8115-15762' '(at4g25610 : 305.0) C2H2-like zinc finger protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); Has 400 Blast hits to 392 proteins in 117 species: Archae - 0; Bacteria - 39; Metazoa - 136; Fungi - 49; Plants - 38; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (reliability: 610.0) & (original description: Putative M7J2.20, Description = Putative uncharacterized protein M7J2.20, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00059466ctg000_955-6722' '(at1g03840 : 324.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 648.0) & (original description: Putative IDD2, Description = Protein indeterminate-domain 2, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben044scf00059850ctg000_4904-9718' '(at5g14140 : 274.0) zinc ion binding;nucleic acid binding;zinc ion binding; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); Has 287 Blast hits to 281 proteins in 115 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 82; Plants - 70; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|39375 : 193.0) no description available & (reliability: 548.0) & (original description: Putative BnaC03g06280D, Description = BnaC03g06280D protein, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101ctg15635_1-2044' '(at2g28710 : 106.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G59820.1); Has 1339 Blast hits to 1281 proteins in 119 species: Archae - 0; Bacteria - 0; Metazoa - 497; Fungi - 0; Plants - 827; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative ZFP3, Description = C2H2-type zinc finger protein 3, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101ctg16285_4336-7076' '(at1g66140 : 152.0) Encodes a zinc finger protein containing only a single zinc finger.; zinc finger protein 4 (ZFP4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 7 (TAIR:AT1G24625.1); Has 1119 Blast hits to 1118 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 4; Plants - 1103; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative ZFP1, Description = Zinc finger protein 4, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00052_408432-411559' '(at1g34370 : 224.0) Encodes a putative nuclear Cys(2)His(2)-type zinc finger protein involved in H+ and Al3+ rhizotoxicity. In mutants exposed to aluminum stress, there is no induction of AtALMT1, an malate transporter known to be involved in the mediation of aluminum toxicity.; sensitive to proton rhizotoxicity 1 (STOP1); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G22890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative Os02g0572900, Description = Os02g0572900 protein, PFAM = PF00096)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00080_663501-666259' '(at1g27730 : 160.0) Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress.; salt tolerance zinc finger (STZ); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger of Arabidopsis thaliana 6 (TAIR:AT5G04340.1); Has 5350 Blast hits to 3982 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 4198; Fungi - 48; Plants - 937; Viruses - 0; Other Eukaryotes - 167 (source: NCBI BLink). & (q42430|zfp1_wheat : 102.0) Zinc-finger protein 1 (WZF1) - Triticum aestivum (Wheat) & (reliability: 320.0) & (original description: Putative zct3, Description = Zinc finger DNA-binding protein, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00109_1038753-1047315' '(at5g14140 : 275.0) zinc ion binding;nucleic acid binding;zinc ion binding; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); Has 287 Blast hits to 281 proteins in 115 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 82; Plants - 70; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|39375 : 194.0) no description available & (reliability: 550.0) & (original description: Putative BnaC03g06280D, Description = BnaC03g06280D protein, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00158_710564-715909' '(at5g66350 : 204.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.; SHORT INTERNODES (SHI); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68707 : 189.0) no description available & (reliability: 398.0) & (original description: Putative SHI, Description = Expression of terpenoids 1, PFAM = PF05142)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00176_487068-490719' '(at5g54630 : 456.0) zinc finger protein-related; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT4G27240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 888.0) & (original description: Putative mrpi2, Description = C2H2-like zinc finger protein, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00307_323162-338731' '(at3g18290 : 1533.0) Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency.; BRUTUS (BTS); FUNCTIONS IN: zinc ion binding; INVOLVED IN: cellular response to iron ion starvation, embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Haemerythrin/HHE cation-binding motif (InterPro:IPR012312); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G74770.1); Has 1787 Blast hits to 1677 proteins in 200 species: Archae - 0; Bacteria - 15; Metazoa - 641; Fungi - 164; Plants - 725; Viruses - 2; Other Eukaryotes - 240 (source: NCBI BLink). & (gnl|cdd|37151 : 276.0) no description available & (gnl|cdd|69040 : 90.0) no description available & (reliability: 3066.0) & (original description: Putative TARF, Description = TMV-associated RING finger protein, PFAM = PF01814;PF01814;PF01814;PF05495;PF13639;PF14599)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00317_456319-459617' '(at1g02040 : 80.1) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G17180.1); Has 5502 Blast hits to 3522 proteins in 286 species: Archae - 2; Bacteria - 120; Metazoa - 2284; Fungi - 460; Plants - 1034; Viruses - 242; Other Eukaryotes - 1360 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative BnaA10g00100D, Description = PEThy, PFAM = PF13912;PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00369_81833-87677' '(at3g50700 : 270.0) zinc finger protein, similar to maize Indeterminate1 (ID1); indeterminate(ID)-domain 2 (IDD2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G66730.1); Has 54862 Blast hits to 20312 proteins in 388 species: Archae - 0; Bacteria - 661; Metazoa - 50262; Fungi - 473; Plants - 881; Viruses - 5; Other Eukaryotes - 2580 (source: NCBI BLink). & (reliability: 540.0) & (original description: Putative IDD2, Description = Zinc finger protein MAGPIE, PFAM = PF12171)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00383_15280-18793' '(at3g51060 : 210.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|68707 : 202.0) no description available & (reliability: 420.0) & (original description: Putative SHI, Description = Protein SHORT INTERNODES, PFAM = PF05142)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00436_629028-632065' '(at2g28200 : 149.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G04390.1); Has 1824 Blast hits to 1700 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 861; Fungi - 12; Plants - 927; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative ZAT5, Description = Zinc finger protein ZAT5, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00436_778336-781550' '(at5g22890 : 311.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT1G34370.1); Has 32454 Blast hits to 15503 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 30756; Fungi - 38; Plants - 696; Viruses - 0; Other Eukaryotes - 964 (source: NCBI BLink). & (reliability: 622.0) & (original description: Putative BnaC09g36180D, Description = BnaC09g36180D protein, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00457_569873-572772' '(at5g03510 : 144.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G04390.1); Has 1636 Blast hits to 1504 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 699; Fungi - 0; Plants - 911; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative ZFP6, Description = C2H2-type zinc finger protein 6, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00482_1246624-1250433' '(at3g45260 : 274.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G60470.1); Has 54288 Blast hits to 20581 proteins in 284 species: Archae - 0; Bacteria - 7; Metazoa - 49362; Fungi - 343; Plants - 724; Viruses - 2; Other Eukaryotes - 3850 (source: NCBI BLink). & (reliability: 548.0) & (original description: Putative C2H2L8, Description = C2H2L domain class transcription factor, PFAM = PF12171)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00494_840682-843419' '(at1g66140 : 129.0) Encodes a zinc finger protein containing only a single zinc finger.; zinc finger protein 4 (ZFP4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 7 (TAIR:AT1G24625.1); Has 1119 Blast hits to 1118 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 4; Plants - 1103; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative C2H2L1, Description = C2H2L domain class transcription factor, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00505_124997-134437' '(at2g47850 : 377.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1); Has 1724 Blast hits to 1003 proteins in 159 species: Archae - 0; Bacteria - 7; Metazoa - 368; Fungi - 218; Plants - 971; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (q5naw2|zfnl1_orysa : 355.0) Zinc finger CCCH domain-containing protein ZFN-like 1 - Oryza sativa (Rice) & (gnl|cdd|36890 : 109.0) no description available & (reliability: 706.0) & (original description: Putative At2g47850, Description = Zinc finger CCCH domain-containing protein 32, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00509_32737-85415' '(at3g45260 : 322.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G60470.1); Has 54288 Blast hits to 20581 proteins in 284 species: Archae - 0; Bacteria - 7; Metazoa - 49362; Fungi - 343; Plants - 724; Viruses - 2; Other Eukaryotes - 3850 (source: NCBI BLink). & (reliability: 644.0) & (original description: Putative ENY, Description = Zinc finger protein MAGPIE, PFAM = PF12171)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00509_34608-86140' '(at3g45260 : 320.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G60470.1); Has 54288 Blast hits to 20581 proteins in 284 species: Archae - 0; Bacteria - 7; Metazoa - 49362; Fungi - 343; Plants - 724; Viruses - 2; Other Eukaryotes - 3850 (source: NCBI BLink). & (reliability: 640.0) & (original description: Putative IDD9, Description = Protein indeterminate-domain 9, PFAM = PF12171)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00595_321249-327937' '(at4g25610 : 318.0) C2H2-like zinc finger protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); Has 400 Blast hits to 392 proteins in 117 species: Archae - 0; Bacteria - 39; Metazoa - 136; Fungi - 49; Plants - 38; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative M7J2.20, Description = Putative uncharacterized protein M7J2.20, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00611_518925-524552' '(at2g19385 : 209.0) zinc ion binding; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2, LYAR-type (InterPro:IPR014898); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT2G19380.1); Has 578 Blast hits to 525 proteins in 182 species: Archae - 0; Bacteria - 8; Metazoa - 240; Fungi - 111; Plants - 79; Viruses - 0; Other Eukaryotes - 140 (source: NCBI BLink). & (gnl|cdd|37397 : 90.5) no description available & (reliability: 418.0) & (original description: Putative At2g19385, Description = At2g19385, PFAM = PF12874;PF08790)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00662_415857-418522' '(at1g27730 : 174.0) Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress.; salt tolerance zinc finger (STZ); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger of Arabidopsis thaliana 6 (TAIR:AT5G04340.1); Has 5350 Blast hits to 3982 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 4198; Fungi - 48; Plants - 937; Viruses - 0; Other Eukaryotes - 167 (source: NCBI BLink). & (q42430|zfp1_wheat : 102.0) Zinc-finger protein 1 (WZF1) - Triticum aestivum (Wheat) & (reliability: 348.0) & (original description: Putative ZAT10, Description = Zinc finger protein ZAT10, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00730_49059-51895' '(at2g29660 : 84.3) zinc finger (C2H2 type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein-related (TAIR:AT5G54630.1); Has 407 Blast hits to 407 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 28; Plants - 376; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00858_36366-40370' '(at5g54630 : 487.0) zinc finger protein-related; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT4G27240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 946.0) & (original description: Putative mrpi2, Description = C2H2-like zinc finger protein, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00872_287495-290903' '(at1g13290 : 317.0) Encodes a putative zinc finger protein (C2H2 family, type IIIA, subclass A1d) that has a WIP domain. Seedlings with mutations in DOT5 have a misaligned venation defect in their leaves and cotyledons. Additional developmental abnormalities, such as elongated petioles and aberrant phyllotaxy suggest that DOT5 is required for normal shoot and root development.; DEFECTIVELY ORGANIZED TRIBUTARIES 5 (DOT5); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G57670.1); Has 7460 Blast hits to 6100 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 6553; Fungi - 59; Plants - 690; Viruses - 0; Other Eukaryotes - 158 (source: NCBI BLink). & (reliability: 634.0) & (original description: Putative DOT5, Description = Protein TRANSPARENT TESTA 1, PFAM = PF00096)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf00984_793248-795994' '(at1g66140 : 153.0) Encodes a zinc finger protein containing only a single zinc finger.; zinc finger protein 4 (ZFP4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 7 (TAIR:AT1G24625.1); Has 1119 Blast hits to 1118 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 4; Plants - 1103; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative C2H2L1, Description = C2H2L domain class transcription factor, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01025_1381314-1390275' '(gnl|cdd|68707 : 155.0) no description available & (at1g19790 : 145.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 7 (SRS7); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 5 (TAIR:AT1G75520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative SHI, Description = BnaC01g31760D protein, PFAM = PF05142)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01025_1385992-1389386' '(gnl|cdd|68707 : 155.0) no description available & (at1g75520 : 150.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative SRS3, Description = Protein SHI RELATED SEQUENCE 3, PFAM = PF05142)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01070_551924-555114' '(at4g35280 : 194.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G17180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative DAZ2, Description = Zinc finger protein ZAT3, PFAM = PF13912;PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01189_265492-277965' '(at2g23740 : 1328.0) nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: chromatin modification; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), SET domain (InterPro:IPR001214), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 5 (TAIR:AT2G35160.1). & (gnl|cdd|36298 : 173.0) no description available & (gnl|cdd|85073 : 128.0) no description available & (reliability: 2656.0) & (original description: Putative SUVR5, Description = Histone-lysine N-methyltransferase SUVR5, PFAM = PF00856;PF05033)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01190_65222-68338' '(gnl|cdd|68707 : 162.0) no description available & (at5g66350 : 152.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.; SHORT INTERNODES (SHI); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative SRS3, Description = Protein SHI RELATED SEQUENCE 3, PFAM = PF05142)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01241_793996-800209' '(at2g02070 : 291.0) indeterminate(ID)-domain 5 (IDD5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 4 (TAIR:AT2G02080.1); Has 61158 Blast hits to 25844 proteins in 587 species: Archae - 8; Bacteria - 480; Metazoa - 52168; Fungi - 1154; Plants - 982; Viruses - 10; Other Eukaryotes - 6356 (source: NCBI BLink). & (reliability: 582.0) & (original description: Putative IDD5, Description = Protein indeterminate-domain 5, chloroplastic, PFAM = PF12171)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01295_560782-571093' '(at5g18550 : 335.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT3G06410.1); Has 2990 Blast hits to 1278 proteins in 210 species: Archae - 0; Bacteria - 30; Metazoa - 599; Fungi - 302; Plants - 1043; Viruses - 0; Other Eukaryotes - 1016 (source: NCBI BLink). & (q5naw2|zfnl1_orysa : 331.0) Zinc finger CCCH domain-containing protein ZFN-like 1 - Oryza sativa (Rice) & (gnl|cdd|36890 : 106.0) no description available & (reliability: 670.0) & (original description: Putative At5g18550, Description = Zinc finger CCCH domain-containing protein 58, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01365_792110-795043' '(at1g34370 : 457.0) Encodes a putative nuclear Cys(2)His(2)-type zinc finger protein involved in H+ and Al3+ rhizotoxicity. In mutants exposed to aluminum stress, there is no induction of AtALMT1, an malate transporter known to be involved in the mediation of aluminum toxicity.; sensitive to proton rhizotoxicity 1 (STOP1); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G22890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 914.0) & (original description: Putative STOP1, Description = Protein SENSITIVE TO PROTON RHIZOTOXICITY 1, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01371_763658-769198' '(at5g66730 : 354.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 2 (TAIR:AT3G50700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 708.0) & (original description: Putative C2H2L9, Description = C2H2L domain class transcription factor, PFAM = PF00096;PF00096)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01379_62132-65328' '(at5g22890 : 294.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT1G34370.1); Has 32454 Blast hits to 15503 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 30756; Fungi - 38; Plants - 696; Viruses - 0; Other Eukaryotes - 964 (source: NCBI BLink). & (reliability: 588.0) & (original description: Putative BnaC09g36180D, Description = BnaC09g36180D protein, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01447_151471-154223' '(at1g80730 : 102.0) Encodes a zinc finger protein and is expressed at high levels in the shoot apex, including the apical meristem, developing leaves and the developing vascular system. expression induced three days post germination. T-DNA insertion mutant has a dominant phenotype in leaf initiation.; zinc-finger protein 1 (ZFP1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: photomorphogenesis; LOCATED IN: intracellular; EXPRESSED IN: inflorescence meristem, petal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G10970.1); Has 1054 Blast hits to 1054 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1051; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative ZFP2, Description = Zinc finger protein, putative, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01455_211784-228310' '(at5g22480 : 694.0) ZPR1 zinc-finger domain protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, ZPR1-type (InterPro:IPR004457); BEST Arabidopsis thaliana protein match is: ZPR1 zinc-finger domain protein (TAIR:AT5G37340.3); Has 1143 Blast hits to 605 proteins in 280 species: Archae - 310; Bacteria - 0; Metazoa - 225; Fungi - 282; Plants - 53; Viruses - 0; Other Eukaryotes - 273 (source: NCBI BLink). & (gnl|cdd|37914 : 531.0) no description available & (gnl|cdd|47978 : 201.0) no description available & (reliability: 1388.0) & (original description: Putative zpr1, Description = Zinc finger protein ZPR1, PFAM = PF03367;PF03367)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01481_390446-393513' '(at5g04390 : 159.0) C2H2-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G10470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative PGSC0003DMG402031064, Description = PEThy, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01495_14285-16745' '(at2g37430 : 97.8) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: cotyledon, root, petiole; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G53600.1); Has 5065 Blast hits to 4182 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 4138; Fungi - 12; Plants - 806; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative zfp2, Description = C2H2-type zinc finger protein, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01521_576410-579996' '(at1g26610 : 157.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT1G26590.1); Has 2336 Blast hits to 2002 proteins in 123 species: Archae - 0; Bacteria - 1; Metazoa - 1559; Fungi - 9; Plants - 678; Viruses - 6; Other Eukaryotes - 83 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative PGSC0003DMG400007715, Description = ZPT4-2, PFAM = PF13912;PF13912;PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01582_891772-898493' '(at1g57820 : 802.0) Encodes a 645-amino acid methylcytosine-binding protein with a PHD domain, two RING finger domains, and an SRA domain that is involved in centromere heterochromatinization. This protein functions as an E3 ubiquitin ligase in vitro. The protein has been shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the former. It plays a role in the establishment/maintenance of chromatin structure during cell division and is localized in the nucleus. Plants over-expressing VIM1/ORTH2 show an inhibition in root growth and a delay in flowering. Both over-expression of GFP:ORTH2 and loss of ORTH2/VIM1 lead to decreased levels of DNA methylation. GFP:ORTH2 over-expressers also have increased levels of FWA transcripts.; VARIANT IN METHYLATION 1 (VIM1); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), SRA-YDG (InterPro:IPR003105), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT1G57800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|65922 : 203.0) no description available & (reliability: 1462.0) & (original description: Putative ORTH2, Description = E3 ubiquitin-protein ligase ORTHRUS 2, PFAM = PF02182;PF00628;PF13445;PF13920)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01639_774812-781261' '(at1g03840 : 325.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 650.0) & (original description: Putative ENY, Description = Zinc finger protein MAGPIE, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01653_15487-18314' '(at2g37740 : 95.1) zinc-finger protein 10 (ZFP10); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G06070.1); Has 808 Blast hits to 808 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 799; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative SUP12, Description = Transcriptional regulator superman, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01694_1088655-1091770' '(at2g29660 : 320.0) zinc finger (C2H2 type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein-related (TAIR:AT5G54630.1); Has 407 Blast hits to 407 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 28; Plants - 376; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 640.0) & (original description: Putative mrpi1, Description = C2H2-like zinc finger protein, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01721_1071646-1081654' '(at4g31420 : 438.0) Zinc finger protein 622; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: Zinc finger protein 622 (TAIR:AT2G24500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37996 : 323.0) no description available & (reliability: 876.0) & (original description: Putative REIL1, Description = Cytoplasmic 60S subunit biogenesis factor REI1 homolog 1, PFAM = PF12756;PF12171)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01749_229834-234741' '(at3g57670 : 375.0) NO TRANSMITTING TRACT (NTT); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: WIP domain protein 4 (TAIR:AT3G20880.1); Has 16303 Blast hits to 11155 proteins in 263 species: Archae - 2; Bacteria - 36; Metazoa - 14565; Fungi - 231; Plants - 853; Viruses - 60; Other Eukaryotes - 556 (source: NCBI BLink). & (reliability: 750.0) & (original description: Putative WIP5, Description = Zinc finger protein WIP5, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01795_1252952-1260589' '(at1g43850 : 291.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 582.0) & (original description: Putative M7J2, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01826_239936-246081' '(at5g63280 : 310.0) C2H2-like zinc finger protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT5G40710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 598.0) & (original description: Putative C2H2L3, Description = C2H2L domain class transcription factor, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf01998_777379-781941' '(at1g03840 : 328.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative C2H2L12, Description = C2H2L domain class transcription factor, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02042_365543-371933' '(at1g03840 : 282.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 564.0) & (original description: Putative MdZF1, Description = Zinc finger protein, PFAM = PF00096)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02062_1017115-1021942' '(at3g57670 : 372.0) NO TRANSMITTING TRACT (NTT); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: WIP domain protein 4 (TAIR:AT3G20880.1); Has 16303 Blast hits to 11155 proteins in 263 species: Archae - 2; Bacteria - 36; Metazoa - 14565; Fungi - 231; Plants - 853; Viruses - 60; Other Eukaryotes - 556 (source: NCBI BLink). & (reliability: 744.0) & (original description: Putative WIP2, Description = Zinc finger protein WIP2, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02191_229224-232444' '(at4g35280 : 198.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G17180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative ZAT3, Description = Zinc finger protein ZAT3, PFAM = PF13912;PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02268_1025908-1029038' '(at1g34370 : 243.0) Encodes a putative nuclear Cys(2)His(2)-type zinc finger protein involved in H+ and Al3+ rhizotoxicity. In mutants exposed to aluminum stress, there is no induction of AtALMT1, an malate transporter known to be involved in the mediation of aluminum toxicity.; sensitive to proton rhizotoxicity 1 (STOP1); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G22890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative BnaA02g06050D, Description = BnaA02g06050D protein, PFAM = PF00096)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02499_243323-245640' '(at3g02790 : 110.0) zinc finger (C2H2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT5G16470.1); Has 86 Blast hits to 86 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative At5g16470, Description = At5g16470, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02537_1069352-1072351' '(at1g34790 : 306.0) Encodes a zinc finger protein; involved in photomorphogenesis, flavonoid biosynthesis, flower and seed development.; transparent testa 1 (TT1); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: WIP domain protein 5 (TAIR:AT1G51220.1); Has 15538 Blast hits to 10276 proteins in 169 species: Archae - 0; Bacteria - 0; Metazoa - 14379; Fungi - 110; Plants - 685; Viruses - 0; Other Eukaryotes - 364 (source: NCBI BLink). & (reliability: 612.0) & (original description: Putative DOT5, Description = Protein TRANSPARENT TESTA 1, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02549_205194-224236' '(at2g02080 : 296.0) indeterminate(ID)-domain 4 (IDD4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT1G14580.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 592.0) & (original description: Putative BnaA06g34340D, Description = BnaA06g34340D protein, PFAM = PF00096)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02583_524202-527023' '(at2g37740 : 97.4) zinc-finger protein 10 (ZFP10); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G06070.1); Has 808 Blast hits to 808 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 799; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 194.8) & (original description: Putative SUP12, Description = Transcriptional regulator superman, PFAM = PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02785_204686-209678' '(at1g08290 : 328.0) WIP domain protein 3 (WIP3); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: WIP domain protein 5 (TAIR:AT1G51220.1); Has 40394 Blast hits to 17903 proteins in 213 species: Archae - 0; Bacteria - 0; Metazoa - 38493; Fungi - 119; Plants - 685; Viruses - 0; Other Eukaryotes - 1097 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative WIP3, Description = Zinc finger protein WIP3, PFAM = PF12874)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02793_834260-837042' '(at2g41940 : 134.0) Encodes a zinc finger protein containing only a single zinc finger.; zinc finger protein 8 (ZFP8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: trichome differentiation, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT3G58070.1); Has 1033 Blast hits to 1031 proteins in 54 species: Archae - 0; Bacteria - 9; Metazoa - 26; Fungi - 10; Plants - 958; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative ZFP8, Description = Zinc finger protein 8, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02801_1510-6996' '(at1g75710 : 437.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein-related (TAIR:AT5G54630.1); Has 773 Blast hits to 521 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 59; Fungi - 55; Plants - 387; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink). & (reliability: 874.0) & (original description: Putative mrpi2, Description = C2H2-like zinc finger protein, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02831_692982-697051' '(at1g55110 : 296.0) indeterminate(ID)-domain 7 (IDD7); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 11 (TAIR:AT3G13810.1); Has 54650 Blast hits to 21530 proteins in 476 species: Archae - 0; Bacteria - 0; Metazoa - 51826; Fungi - 384; Plants - 807; Viruses - 2; Other Eukaryotes - 1631 (source: NCBI BLink). & (reliability: 592.0) & (original description: Putative C2H2L12, Description = C2H2L domain class transcription factor, PFAM = PF00096)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02868_527174-534186' '(at4g31420 : 441.0) Zinc finger protein 622; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: Zinc finger protein 622 (TAIR:AT2G24500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37996 : 323.0) no description available & (reliability: 882.0) & (original description: Putative REIL1, Description = Cytoplasmic 60S subunit biogenesis factor REI1 homolog 1, PFAM = PF12756;PF12171)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02911_305190-310108' '(at2g01940 : 263.0) May be involved in an early event in shoot gravitropism such as gravity perception and/or a signaling process subsequent to amyloplast sedimentation as a putative transcription factor in gravity-perceptive cells.; SHOOT GRAVITROPISM 5 (SGR5); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 14 (TAIR:AT1G68130.1); Has 13187 Blast hits to 8766 proteins in 255 species: Archae - 0; Bacteria - 0; Metazoa - 12025; Fungi - 55; Plants - 746; Viruses - 1; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative BnaC06g26120D, Description = BnaC06g26120D protein, PFAM = PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf02995_242475-245218' '(at1g66140 : 135.0) Encodes a zinc finger protein containing only a single zinc finger.; zinc finger protein 4 (ZFP4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 7 (TAIR:AT1G24625.1); Has 1119 Blast hits to 1118 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 4; Plants - 1103; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative C2H2L1, Description = C2H2L domain class transcription factor, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf03203_1079653-1091158' '(at5g06070 : 80.9) Isolated as a mutation defective in petal development with specific effects on adaxial petals which are filamentous or absent. Encodes a Superman (SUP) like protein with zinc finger motifs. Transcript is detected in petal primordia and protein is localized to the nucleus.; RABBIT EARS (RBE); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc-finger protein 10 (TAIR:AT2G37740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative RBE, Description = Palmate-like pentafoliata 1 transcription factor, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf03282_854811-900088' '(at4g21160 : 474.0) ADP-ribosylation factor GTPase-activating protein containing zinc finger and C2 domains and a novel PI-3-P-binding protein region. Binds PI-3-P. Highest expression levels in flowering tissue, rosettes and roots. A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ZAC; FUNCTIONS IN: phospholipid binding, ARF GTPase activator activity; INVOLVED IN: intracellular protein transport; LOCATED IN: Golgi apparatus, plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 13 (TAIR:AT4G05330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36248 : 194.0) no description available & (gnl|cdd|85433 : 145.0) no description available & (reliability: 948.0) & (original description: Putative AGD12, Description = ADP-ribosylation factor GTPase-activating protein AGD12, PFAM = PF00168;PF01412)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf03332_427307-431837' '(at3g57670 : 367.0) NO TRANSMITTING TRACT (NTT); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: WIP domain protein 4 (TAIR:AT3G20880.1); Has 16303 Blast hits to 11155 proteins in 263 species: Archae - 2; Bacteria - 36; Metazoa - 14565; Fungi - 231; Plants - 853; Viruses - 60; Other Eukaryotes - 556 (source: NCBI BLink). & (reliability: 734.0) & (original description: Putative WIP2, Description = Zinc finger protein WIP2, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf03548_180841-186719' '(at1g57820 : 654.0) Encodes a 645-amino acid methylcytosine-binding protein with a PHD domain, two RING finger domains, and an SRA domain that is involved in centromere heterochromatinization. This protein functions as an E3 ubiquitin ligase in vitro. The protein has been shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the former. It plays a role in the establishment/maintenance of chromatin structure during cell division and is localized in the nucleus. Plants over-expressing VIM1/ORTH2 show an inhibition in root growth and a delay in flowering. Both over-expression of GFP:ORTH2 and loss of ORTH2/VIM1 lead to decreased levels of DNA methylation. GFP:ORTH2 over-expressers also have increased levels of FWA transcripts.; VARIANT IN METHYLATION 1 (VIM1); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), SRA-YDG (InterPro:IPR003105), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT1G57800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|65922 : 194.0) no description available & (reliability: 1180.0) & (original description: Putative ORTH2, Description = E3 ubiquitin-protein ligase ORTHRUS 2, PFAM = PF02182)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf03565_132668-147232' '(at4g25610 : 321.0) C2H2-like zinc finger protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); Has 400 Blast hits to 392 proteins in 117 species: Archae - 0; Bacteria - 39; Metazoa - 136; Fungi - 49; Plants - 38; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (reliability: 642.0) & (original description: Putative At4g25610, Description = C2H2-like zinc finger protein, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf03565_135654-147206' '(at4g25610 : 80.9) C2H2-like zinc finger protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); Has 400 Blast hits to 392 proteins in 117 species: Archae - 0; Bacteria - 39; Metazoa - 136; Fungi - 49; Plants - 38; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative PGSC0003DMG400015791, Description = , PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf03607_312157-321596' '(at1g30970 : 290.0) Encodes SUF4 (SUPPRESSOR of FRI 4), a putative zinc-finger-containing transcription factor that is required for delayed flowering in winter-annual Arabidopsis. suf4 mutations strongly suppress the late-flowering phenotype of FRI (FRIGIDA) mutants. suf4 mutants also show reduced H3K4 trimethylation at FLC (FLOWERING LOCUS C), a floral inhibitor. SUF4 may act to specifically recruit a putative histone H3 methyltransferase EFS (EARLY FLOWERING IN SHORT DAYS) and the PAF1-like complex to the FLC locus.; suppressor of FRIGIDA4 (SUF4); FUNCTIONS IN: DNA binding, protein homodimerization activity, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: histone H3-K4 methylation, negative regulation of flower development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 20927 Blast hits to 14395 proteins in 967 species: Archae - 31; Bacteria - 3069; Metazoa - 8441; Fungi - 3219; Plants - 3230; Viruses - 675; Other Eukaryotes - 2262 (source: NCBI BLink). & (gnl|cdd|38104 : 141.0) no description available & (reliability: 580.0) & (original description: Putative SUF4, Description = Protein SUPPRESSOR OF FRI 4, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf03693_746923-751542' '(at5g66730 : 360.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 2 (TAIR:AT3G50700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 720.0) & (original description: Putative IDD1, Description = Protein indeterminate-domain 1, PFAM = PF00096)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf04124_275531-278526' '(at3g60580 : 146.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G45120.1); Has 2639 Blast hits to 2349 proteins in 138 species: Archae - 0; Bacteria - 0; Metazoa - 1624; Fungi - 13; Plants - 935; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative ZAT9, Description = Zinc finger protein ZAT9, PFAM = PF13912;PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf04173_261893-266352' '(at1g03840 : 414.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 828.0) & (original description: Putative MGP, Description = Zinc finger protein MAGPIE, PFAM = PF00096)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf04230_49458-52534' '(at4g12240 : 398.0) zinc finger (C2H2 type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G52010.1); Has 77 Blast hits to 77 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 71; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 796.0) & (original description: Putative BnaA03g25040D, Description = BnaA03g25040D protein, PFAM = PF01936)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf04267_160940-165081' '(at1g72050 : 268.0) Encodes a transcriptional factor TFIIIA required for transcription of 5S rRNA gene. 5S rRNA is the smallest constituent of the ribosome. Work on one of the gene models AT1G72050.2 showed that it encodes a protein with nine Cys(2)-His(2)-type zinc fingers, a characteristic feature of TFIIIA proteins. AT1G72050.2 also contains a 23 amino acid spacer between fingers 1 and 2, a 66 amino acid spacer between fingers 4 and 5, and a 50 amino acid non-finger C-terminal tail. in vitro assay demonstrated that AT1g72050.2 binds to 5S rDNA and efficiently stimulates the transcription of 5S rRNA. AT1g72050.2 also binds to 5S rRNA in vitro. AT1g72050.2 is located at several nuclear foci including the nucleolus and is absent from the cytoplasm.; transcription factor IIIA (TFIIIA); FUNCTIONS IN: 5S rRNA binding, zinc ion binding, sequence-specific DNA binding transcription factor activity, 5S rDNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, C2H2-type/integrase, DNA-binding (InterPro:IPR013087); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative TFIIIA, Description = Transcription factor IIIA, PFAM = PF00096;PF00096;PF12874)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf04300_70659-78729' '(at3g07940 : 489.0) Calcium-dependent ARF-type GTPase activating protein family; FUNCTIONS IN: ARF GTPase activator activity, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent ARF-type GTPase activating protein family (TAIR:AT4G21160.4); Has 9376 Blast hits to 8361 proteins in 305 species: Archae - 0; Bacteria - 0; Metazoa - 5295; Fungi - 1386; Plants - 1701; Viruses - 0; Other Eukaryotes - 994 (source: NCBI BLink). & (gnl|cdd|36248 : 188.0) no description available & (gnl|cdd|85433 : 136.0) no description available & (reliability: 978.0) & (original description: Putative AGD11, Description = Probable ADP-ribosylation factor GTPase-activating protein AGD11, PFAM = PF01412;PF00168)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf04371_196511-201072' '(at5g04390 : 148.0) C2H2-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G10470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative ZAT5, Description = Zinc finger protein ZAT5, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf04400_221959-225596' '(at1g26610 : 169.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT1G26590.1); Has 2336 Blast hits to 2002 proteins in 123 species: Archae - 0; Bacteria - 1; Metazoa - 1559; Fungi - 9; Plants - 678; Viruses - 6; Other Eukaryotes - 83 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative PGSC0003DMG400002817, Description = ZPT4-2, PFAM = PF13912;PF13912;PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf04558_171741-190440' '(at2g27100 : 618.0) Identified as a leaf form mutant by Redei having serrated leaves. Further analysis of the single loss of function allele indicated pleiotropic effects extending to many aspects of shoot development such as taller meristems, alterations in phase transition, phyllotaxy and branching. Encodes a single zinc finger containing protein that is expressed in meristems and organ primordia.; SERRATE (SE); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: cytosol, nuclear speck, nucleolus, nucleus, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Arsenite-resistance protein 2 (InterPro:IPR007042), Protein of unknown function DUF3546 (InterPro:IPR021933), Zinc finger, C2H2-type (InterPro:IPR007087); Has 5797 Blast hits to 4596 proteins in 474 species: Archae - 2; Bacteria - 583; Metazoa - 2822; Fungi - 981; Plants - 712; Viruses - 137; Other Eukaryotes - 560 (source: NCBI BLink). & (gnl|cdd|37506 : 345.0) no description available & (reliability: 1236.0) & (original description: Putative SE, Description = Serrate RNA effector molecule, PFAM = PF04959;PF12066)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf04664_539797-543139' '(gnl|cdd|68707 : 166.0) no description available & (at1g75520 : 147.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative SRS3, Description = Protein SHI RELATED SEQUENCE 3, PFAM = PF05142)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf04741_201316-204308' '(at3g14740 : 301.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36173 : 182.0) no description available & (gnl|cdd|34742 : 148.0) no description available & (reliability: 602.0) & (original description: Putative BnaA05g24810D, Description = BnaA05g24810D protein, PFAM = PF13832;PF00628)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf04953_522367-526807' '(at5g03150 : 293.0) JKD is a nuclear-localized putative transcription factor with three zinc finger domains. jkd mutants show a number of root patterning defects including ectopic periclinal divisions in the cortex, increased cell numbers in the cortical and epidermal layers, a disrupted QC marker expression pattern, and disorganized QC and columella cells. jkd mutants also have a reduced number of meristematic cells in their roots. JKD can interact with the SCR and SHR proteins implicated in root patterning, as well as another zinc finger transcription factor, MAGPIE. All of these interactions require the first zinc finger in JKD according to a Y2H assay. There are also transcriptional interactions among these proteins. The initiation of JKD transcription does not appear to depend on SCR and SHR, but later expression in the post-embryonic QC cells and ground tissue initials is reduced in scr and shr mutants. JKD also appears to be required for SCR transcription beginning in the embryo. There is also some evidence that JKD plays a role in promoting the movement of SHR into the nucleus, particularly in QC cells, but this may be indirect.; JACKDAW (JKD); FUNCTIONS IN: protein binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of epidermal cell differentiation, regulation of meristem growth, regulation of cell division, root development, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G66730.1); Has 56579 Blast hits to 20803 proteins in 357 species: Archae - 0; Bacteria - 66; Metazoa - 49427; Fungi - 692; Plants - 856; Viruses - 6; Other Eukaryotes - 5532 (source: NCBI BLink). & (reliability: 586.0) & (original description: Putative JKD, Description = Zinc finger protein JACKDAW, PFAM = PF12171)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf05373_1328-3828' '(at2g37430 : 121.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: cotyledon, root, petiole; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G53600.1); Has 5065 Blast hits to 4182 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 4138; Fungi - 12; Plants - 806; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative zct1, Description = Zinc finger DNA-binding protein, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf05373_142392-144898' '(at2g28710 : 123.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G59820.1); Has 1339 Blast hits to 1281 proteins in 119 species: Archae - 0; Bacteria - 0; Metazoa - 497; Fungi - 0; Plants - 827; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative zct2, Description = Zinc finger DNA-binding protein, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf05378_26472-33227' '(at1g30970 : 110.0) Encodes SUF4 (SUPPRESSOR of FRI 4), a putative zinc-finger-containing transcription factor that is required for delayed flowering in winter-annual Arabidopsis. suf4 mutations strongly suppress the late-flowering phenotype of FRI (FRIGIDA) mutants. suf4 mutants also show reduced H3K4 trimethylation at FLC (FLOWERING LOCUS C), a floral inhibitor. SUF4 may act to specifically recruit a putative histone H3 methyltransferase EFS (EARLY FLOWERING IN SHORT DAYS) and the PAF1-like complex to the FLC locus.; suppressor of FRIGIDA4 (SUF4); FUNCTIONS IN: DNA binding, protein homodimerization activity, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: histone H3-K4 methylation, negative regulation of flower development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 20927 Blast hits to 14395 proteins in 967 species: Archae - 31; Bacteria - 3069; Metazoa - 8441; Fungi - 3219; Plants - 3230; Viruses - 675; Other Eukaryotes - 2262 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative SUF4, Description = Protein SUPPRESSOR OF FRI 4, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf05554_941651-946844' '(at1g75710 : 283.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein-related (TAIR:AT5G54630.1); Has 773 Blast hits to 521 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 59; Fungi - 55; Plants - 387; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink). & (reliability: 566.0) & (original description: Putative mrpi2, Description = C2H2-like zinc finger protein, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf06064_158111-162798' '(at2g01940 : 340.0) May be involved in an early event in shoot gravitropism such as gravity perception and/or a signaling process subsequent to amyloplast sedimentation as a putative transcription factor in gravity-perceptive cells.; SHOOT GRAVITROPISM 5 (SGR5); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 14 (TAIR:AT1G68130.1); Has 13187 Blast hits to 8766 proteins in 255 species: Archae - 0; Bacteria - 0; Metazoa - 12025; Fungi - 55; Plants - 746; Viruses - 1; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 680.0) & (original description: Putative IDD14, Description = Protein indeterminate-domain 14, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf06091_106861-109685' '(at5g25160 : 120.0) Encodes a zinc finger protein containing only a single zinc finger.; zinc finger protein 3 (ZFP3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: shoot apex, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G10970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative ZFP3, Description = Zinc finger protein 3, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf06153_315464-318293' '(at4g17810 : 107.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc-finger protein 10 (TAIR:AT2G37740.1); Has 1054 Blast hits to 1054 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1054; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative PALM1, Description = Palmate-like pentafoliata 1 transcription factor, PFAM = PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf06280_583460-586593' '(at3g28210 : 144.0) Encodes a putative zinc finger protein (PMZ).; PMZ; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to abscisic acid stimulus, response to chitin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type, AN1-like) family protein (TAIR:AT2G41835.1); Has 518 Blast hits to 511 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 257; Fungi - 120; Plants - 80; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|38393 : 112.0) no description available & (reliability: 288.0) & (original description: Putative SAP12, Description = Zinc finger AN1 domain-containing stress-associated protein 12, PFAM = PF01428)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf06397_528273-532340' '(at5g03150 : 317.0) JKD is a nuclear-localized putative transcription factor with three zinc finger domains. jkd mutants show a number of root patterning defects including ectopic periclinal divisions in the cortex, increased cell numbers in the cortical and epidermal layers, a disrupted QC marker expression pattern, and disorganized QC and columella cells. jkd mutants also have a reduced number of meristematic cells in their roots. JKD can interact with the SCR and SHR proteins implicated in root patterning, as well as another zinc finger transcription factor, MAGPIE. All of these interactions require the first zinc finger in JKD according to a Y2H assay. There are also transcriptional interactions among these proteins. The initiation of JKD transcription does not appear to depend on SCR and SHR, but later expression in the post-embryonic QC cells and ground tissue initials is reduced in scr and shr mutants. JKD also appears to be required for SCR transcription beginning in the embryo. There is also some evidence that JKD plays a role in promoting the movement of SHR into the nucleus, particularly in QC cells, but this may be indirect.; JACKDAW (JKD); FUNCTIONS IN: protein binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of epidermal cell differentiation, regulation of meristem growth, regulation of cell division, root development, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G66730.1); Has 56579 Blast hits to 20803 proteins in 357 species: Archae - 0; Bacteria - 66; Metazoa - 49427; Fungi - 692; Plants - 856; Viruses - 6; Other Eukaryotes - 5532 (source: NCBI BLink). & (reliability: 634.0) & (original description: Putative C2H2L8, Description = C2H2L domain class transcription factor, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf06467_94241-96999' '(at1g27730 : 164.0) Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress.; salt tolerance zinc finger (STZ); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger of Arabidopsis thaliana 6 (TAIR:AT5G04340.1); Has 5350 Blast hits to 3982 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 4198; Fungi - 48; Plants - 937; Viruses - 0; Other Eukaryotes - 167 (source: NCBI BLink). & (q42430|zfp1_wheat : 107.0) Zinc-finger protein 1 (WZF1) - Triticum aestivum (Wheat) & (reliability: 328.0) & (original description: Putative zct3, Description = Zinc finger DNA-binding protein, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf06662_77939-80928' '(at1g02030 : 100.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT3G60580.1); Has 3215 Blast hits to 2725 proteins in 143 species: Archae - 0; Bacteria - 4; Metazoa - 2130; Fungi - 20; Plants - 967; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative PGSC0003DMG400004763, Description = C2H2-type zinc-finger protein, putative, PFAM = PF13912;PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf06687_8757-13058' '(at2g01940 : 375.0) May be involved in an early event in shoot gravitropism such as gravity perception and/or a signaling process subsequent to amyloplast sedimentation as a putative transcription factor in gravity-perceptive cells.; SHOOT GRAVITROPISM 5 (SGR5); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 14 (TAIR:AT1G68130.1); Has 13187 Blast hits to 8766 proteins in 255 species: Archae - 0; Bacteria - 0; Metazoa - 12025; Fungi - 55; Plants - 746; Viruses - 1; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 750.0) & (original description: Putative SGR5, Description = Protein SHOOT GRAVITROPISM 5, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf06799_143345-146373' '(at2g28200 : 138.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G04390.1); Has 1824 Blast hits to 1700 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 861; Fungi - 12; Plants - 927; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative EPF1, Description = Zinc finger protein ZAT5, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf07000_13695-18475' '(at3g57670 : 327.0) NO TRANSMITTING TRACT (NTT); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: WIP domain protein 4 (TAIR:AT3G20880.1); Has 16303 Blast hits to 11155 proteins in 263 species: Archae - 2; Bacteria - 36; Metazoa - 14565; Fungi - 231; Plants - 853; Viruses - 60; Other Eukaryotes - 556 (source: NCBI BLink). & (reliability: 654.0) & (original description: Putative DOT5, Description = Protein TRANSPARENT TESTA 1, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf07474_36027-56329' '(at1g43850 : 489.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 978.0) & (original description: Putative SEU, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf07591_98570-111745' '(at3g18290 : 1575.0) Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency.; BRUTUS (BTS); FUNCTIONS IN: zinc ion binding; INVOLVED IN: cellular response to iron ion starvation, embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Haemerythrin/HHE cation-binding motif (InterPro:IPR012312); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G74770.1); Has 1787 Blast hits to 1677 proteins in 200 species: Archae - 0; Bacteria - 15; Metazoa - 641; Fungi - 164; Plants - 725; Viruses - 2; Other Eukaryotes - 240 (source: NCBI BLink). & (gnl|cdd|37151 : 276.0) no description available & (gnl|cdd|69040 : 88.5) no description available & (reliability: 3150.0) & (original description: Putative BTS, Description = AT3g18290/MIE15_8, PFAM = PF14599;PF01814;PF01814;PF01814;PF05495)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf07693_14148-17548' '(at1g02040 : 105.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G17180.1); Has 5502 Blast hits to 3522 proteins in 286 species: Archae - 2; Bacteria - 120; Metazoa - 2284; Fungi - 460; Plants - 1034; Viruses - 242; Other Eukaryotes - 1360 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative ZPT4-1, Description = Cys2/His2 zinc-finger transcription factor, PFAM = PF13912;PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf07785_114386-117405' '(at2g45120 : 103.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT3G60580.1); Has 2765 Blast hits to 2574 proteins in 176 species: Archae - 0; Bacteria - 8; Metazoa - 1573; Fungi - 69; Plants - 926; Viruses - 18; Other Eukaryotes - 171 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative PEThy, Description = C2H2 zinc-finger protein ZPT2-10, PFAM = PF13912;PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf08001_50196-53014' '(at1g27730 : 148.0) Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress.; salt tolerance zinc finger (STZ); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger of Arabidopsis thaliana 6 (TAIR:AT5G04340.1); Has 5350 Blast hits to 3982 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 4198; Fungi - 48; Plants - 937; Viruses - 0; Other Eukaryotes - 167 (source: NCBI BLink). & (q42430|zfp1_wheat : 89.4) Zinc-finger protein 1 (WZF1) - Triticum aestivum (Wheat) & (reliability: 296.0) & (original description: Putative ZAT10, Description = Zinc finger protein ZAT10, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf08011_162490-165788' '(at5g52010 : 454.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT4G12240.1); Has 70 Blast hits to 70 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 65; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 908.0) & (original description: Putative At5g52010, Description = AT5g52010/MSG15_9, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf08273_614611-618852' '(at3g51060 : 174.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|68707 : 164.0) no description available & (reliability: 348.0) & (original description: Putative SRS1, Description = Protein SHI RELATED SEQUENCE 1, PFAM = PF05142)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf08719_26933-29260' '(at2g28710 : 100.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G59820.1); Has 1339 Blast hits to 1281 proteins in 119 species: Archae - 0; Bacteria - 0; Metazoa - 497; Fungi - 0; Plants - 827; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative ZFP2, Description = Zinc finger, C2H2, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf08721_13765-17048' '(at1g26610 : 144.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT1G26590.1); Has 2336 Blast hits to 2002 proteins in 123 species: Archae - 0; Bacteria - 1; Metazoa - 1559; Fungi - 9; Plants - 678; Viruses - 6; Other Eukaryotes - 83 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative ZFP4, Description = ZPT4-4, PFAM = PF13912;PF13912;PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf08892_1821-23178' '(at1g70810 : 213.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G70800.1); Has 2955 Blast hits to 2573 proteins in 230 species: Archae - 0; Bacteria - 3; Metazoa - 1505; Fungi - 422; Plants - 763; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (gnl|cdd|36248 : 194.0) no description available & (gnl|cdd|84577 : 80.4) no description available & (reliability: 386.0) & (original description: Putative CAR10, Description = Protein C2-DOMAIN ABA-RELATED 10, PFAM = PF00168)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf09063_29224-37201' '(at1g43850 : 282.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 564.0) & (original description: Putative M7J2, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf09107_280644-284167' '(at1g26610 : 185.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT1G26590.1); Has 2336 Blast hits to 2002 proteins in 123 species: Archae - 0; Bacteria - 1; Metazoa - 1559; Fungi - 9; Plants - 678; Viruses - 6; Other Eukaryotes - 83 (source: NCBI BLink). & (reliability: 370.0) & (original description: Putative PGSC0003DMG400002817, Description = ZPT4-3, PFAM = PF13912;PF13912;PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf09644_46159-52235' '(at5g20220 : 420.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, zinc ion binding, nucleic acid binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 3073 Blast hits to 2296 proteins in 256 species: Archae - 0; Bacteria - 10; Metazoa - 639; Fungi - 640; Plants - 331; Viruses - 1155; Other Eukaryotes - 298 (source: NCBI BLink). & (reliability: 840.0) & (original description: Putative BnaA10g15210D, Description = BnaA10g15210D protein, PFAM = PF00098)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf10015_239241-250964' '(at2g37430 : 117.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: cotyledon, root, petiole; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G53600.1); Has 5065 Blast hits to 4182 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 4138; Fungi - 12; Plants - 806; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative ZAT7, Description = Zinc finger protein ZAT7, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf10015_246155-248661' '(at2g28710 : 121.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G59820.1); Has 1339 Blast hits to 1281 proteins in 119 species: Archae - 0; Bacteria - 0; Metazoa - 497; Fungi - 0; Plants - 827; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative zct2, Description = Zinc finger DNA-binding protein, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf10015_336895-339398' '(at2g37430 : 122.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: cotyledon, root, petiole; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G53600.1); Has 5065 Blast hits to 4182 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 4138; Fungi - 12; Plants - 806; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative ZFP2, Description = Cys2/His2-type zinc finger protein, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf11182_290372-294838' '(at1g68480 : 112.0) Encodes a putative zinc finger transcription factor that is necessary for proper lateral organ shape and is sufficient to induce the proliferation of lateral organ tissue. Together with NUB, it is involved in stamen and carpel development.; JAGGED (JAG); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT1G13400.1); Has 723 Blast hits to 723 proteins in 72 species: Archae - 0; Bacteria - 6; Metazoa - 56; Fungi - 19; Plants - 626; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative JAG, Description = Zinc finger, C2H2, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf11689_264986-269813' '(at1g72050 : 343.0) Encodes a transcriptional factor TFIIIA required for transcription of 5S rRNA gene. 5S rRNA is the smallest constituent of the ribosome. Work on one of the gene models AT1G72050.2 showed that it encodes a protein with nine Cys(2)-His(2)-type zinc fingers, a characteristic feature of TFIIIA proteins. AT1G72050.2 also contains a 23 amino acid spacer between fingers 1 and 2, a 66 amino acid spacer between fingers 4 and 5, and a 50 amino acid non-finger C-terminal tail. in vitro assay demonstrated that AT1g72050.2 binds to 5S rDNA and efficiently stimulates the transcription of 5S rRNA. AT1g72050.2 also binds to 5S rRNA in vitro. AT1g72050.2 is located at several nuclear foci including the nucleolus and is absent from the cytoplasm.; transcription factor IIIA (TFIIIA); FUNCTIONS IN: 5S rRNA binding, zinc ion binding, sequence-specific DNA binding transcription factor activity, 5S rDNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, C2H2-type/integrase, DNA-binding (InterPro:IPR013087); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 686.0) & (original description: Putative TFIIIA, Description = Transcription factor IIIA, PFAM = PF12874;PF00096;PF00096;PF00096)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf12639_5028-13231' '(at5g18550 : 352.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT3G06410.1); Has 2990 Blast hits to 1278 proteins in 210 species: Archae - 0; Bacteria - 30; Metazoa - 599; Fungi - 302; Plants - 1043; Viruses - 0; Other Eukaryotes - 1016 (source: NCBI BLink). & (q5naw2|zfnl1_orysa : 341.0) Zinc finger CCCH domain-containing protein ZFN-like 1 - Oryza sativa (Rice) & (gnl|cdd|36890 : 111.0) no description available & (reliability: 704.0) & (original description: Putative At5g18550, Description = Zinc finger CCCH domain-containing protein 58, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf13137_72253-77831' '(at3g42860 : 181.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, GRF-type (InterPro:IPR010666), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: cold shock domain protein 1 (TAIR:AT4G36020.1); Has 49068 Blast hits to 18471 proteins in 427 species: Archae - 0; Bacteria - 1; Metazoa - 1577; Fungi - 900; Plants - 1276; Viruses - 44658; Other Eukaryotes - 656 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative PGSC0003DMG400027518, Description = DNA topoisomerase, PFAM = PF06839;PF06839;PF00098;PF00098;PF00098)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf16127_8294-16196' '(at2g47850 : 331.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1); Has 1724 Blast hits to 1003 proteins in 159 species: Archae - 0; Bacteria - 7; Metazoa - 368; Fungi - 218; Plants - 971; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (q5naw2|zfnl1_orysa : 300.0) Zinc finger CCCH domain-containing protein ZFN-like 1 - Oryza sativa (Rice) & (gnl|cdd|36890 : 101.0) no description available & (reliability: 596.0) & (original description: Putative Os01g0257400, Description = Zinc finger CCCH domain-containing protein 5, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf17237_102891-105700' '(at1g27730 : 158.0) Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress.; salt tolerance zinc finger (STZ); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger of Arabidopsis thaliana 6 (TAIR:AT5G04340.1); Has 5350 Blast hits to 3982 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 4198; Fungi - 48; Plants - 937; Viruses - 0; Other Eukaryotes - 167 (source: NCBI BLink). & (q42430|zfp1_wheat : 117.0) Zinc-finger protein 1 (WZF1) - Triticum aestivum (Wheat) & (reliability: 316.0) & (original description: Putative zfp, Description = Osmotic stress-induced zinc-finger protein, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf17597_195066-197987' '(at3g23130 : 92.0) Flower-specific gene controlling the boundary of the stamen and carpel whorls. Similar to zinc finger transcription factors.; SUPERMAN (SUP); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: flower development, negative regulation of transcription, specification of floral organ identity; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 11 (TAIR:AT2G42410.1); Has 1049 Blast hits to 1049 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 37; Fungi - 0; Plants - 1011; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative SUP, Description = Transcriptional regulator SUPERMAN, PFAM = PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf18731_7250-9789' '(at3g53600 : 125.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT2G37430.1); Has 959 Blast hits to 927 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 2; Plants - 801; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative ZAT12, Description = Zinc finger protein ZAT12, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf18731_7262-9783' '(at3g53600 : 106.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT2G37430.1); Has 959 Blast hits to 927 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 2; Plants - 801; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative zct1, Description = C2H2-type zinc finger protein, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf21969_490-3773' '(at1g75520 : 206.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|68707 : 191.0) no description available & (reliability: 412.0) & (original description: Putative SRS7, Description = Protein SHI RELATED SEQUENCE 7, PFAM = PF05142)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf24149_13152-15823' '(at1g68360 : 173.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 6 (TAIR:AT1G67030.1); Has 1137 Blast hits to 1135 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 1124; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative Gl-3, Description = Multicellular trichome development C2H2 zinc finger transcription factor, PFAM = )' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf24149_35761-38414' '(at1g68360 : 162.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 6 (TAIR:AT1G67030.1); Has 1137 Blast hits to 1135 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 1124; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative ZFP6, Description = Zinc finger protein 6, PFAM = PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf26762_20975-24216' '(at5g04390 : 134.0) C2H2-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT3G10470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative BnaCnng71010D, Description = BnaCnng71010D protein, PFAM = PF13912;PF13912)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf38401_9118-14079' '(at3g13810 : 316.0) indeterminate(ID)-domain 11 (IDD11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 7 (TAIR:AT1G55110.1). & (reliability: 632.0) & (original description: Putative C2H2L12, Description = C2H2L domain class transcription factor, PFAM = PF12171)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf38401_9124-14034' '(at3g13810 : 315.0) indeterminate(ID)-domain 11 (IDD11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 7 (TAIR:AT1G55110.1). & (reliability: 630.0) & (original description: Putative BnaC01g37430D, Description = BnaC01g37430D protein, PFAM = PF12171)' T '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'niben101scf39284_11612-14067' '(at5g57520 : 80.9) Encodes a zinc finger protein containing only a single zinc finger.; zinc finger protein 2 (ZFP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 7 (TAIR:AT1G24625.1); Has 1032 Blast hits to 1032 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1032; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative ZFP2, Description = Zinc finger protein 2, PFAM = )' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.3scaffold2749_32744-42252' '(at4g25440 : 453.0) zinc finger WD40 repeat protein 1 (ZFWD1); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: xylem; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, CCCH-type (InterPro:IPR000571), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G51980.1); Has 28356 Blast hits to 16036 proteins in 564 species: Archae - 44; Bacteria - 4332; Metazoa - 10522; Fungi - 6455; Plants - 3358; Viruses - 0; Other Eukaryotes - 3645 (source: NCBI BLink). & (gnl|cdd|35495 : 186.0) no description available & (gnl|cdd|29257 : 112.0) no description available & (reliability: 906.0) & (original description: Putative ZFWD1, Description = Zinc finger CCCH domain-containing protein 48, PFAM = PF00400;PF00400;PF00400;PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.3scaffold4442_60430-68689' '(q9swf9|zfnl_pea : 320.0) Zinc finger CCCH domain-containing protein ZFN-like - Pisum sativum (Garden pea) & (at3g02830 : 296.0) Encodes a zinc finger protein.; zinc finger protein 1 (ZFN1); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: zinc finger nuclease 3 (TAIR:AT5G16540.1); Has 1325 Blast hits to 706 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 147; Plants - 868; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|36890 : 106.0) no description available & (reliability: 592.0) & (original description: Putative ZFN1, Description = Zinc finger CCCH domain-containing protein 32, PFAM = PF00642;PF00642;PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.3scaffold18745_13769-19283' '(at3g12130 : 178.0) KH domain-containing protein / zinc finger (CCCH type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein / zinc finger (CCCH type) family protein (TAIR:AT5G06770.1); Has 1306 Blast hits to 1045 proteins in 139 species: Archae - 0; Bacteria - 4; Metazoa - 726; Fungi - 40; Plants - 423; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative At3g12130, Description = Zinc finger CCCH domain-containing protein 36, PFAM = PF00642;PF00013)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.3scaffold37874_10323-20476' '(at5g06770 : 154.0) KH domain-containing protein / zinc finger (CCCH type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein / zinc finger (CCCH type) family protein (TAIR:AT3G12130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative Os02g0194200, Description = Zinc finger CCCH domain-containing protein 14, PFAM = PF00642;PF00642;PF14608;PF00013)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.3scaffold43652_6653-9936' '(at1g03790 : 231.0) Encodes SOMNUS (SOM), a nucleus-localized CCCH-type zinc finger protein. SOM negatively regulates light-dependent seed germination downstream of PIL5 (AT2G20180).; SOMNUS (SOM); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G44260.1); Has 3270 Blast hits to 1059 proteins in 150 species: Archae - 0; Bacteria - 0; Metazoa - 444; Fungi - 30; Plants - 421; Viruses - 3; Other Eukaryotes - 2372 (source: NCBI BLink). & (gnl|cdd|36808 : 228.0) no description available & (reliability: 462.0) & (original description: Putative se2c5, Description = Zinc finger CCCH domain-containing protein 2, PFAM = PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.3scaffold43797_3855-10703' '(at4g38890 : 822.0) FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity, zinc ion binding, nucleic acid binding; INVOLVED IN: oxidation reduction, tRNA processing, metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269), tRNA-dihydrouridine synthase, conserved site (InterPro:IPR018517); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G49640.1); Has 11364 Blast hits to 11268 proteins in 2588 species: Archae - 15; Bacteria - 7817; Metazoa - 496; Fungi - 531; Plants - 173; Viruses - 0; Other Eukaryotes - 2332 (source: NCBI BLink). & (gnl|cdd|37544 : 716.0) no description available & (gnl|cdd|73368 : 252.0) no description available & (reliability: 1644.0) & (original description: Putative dus3l, Description = tRNA-dihydrouridine synthase 3, PFAM = PF00642;PF01207)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.3scaffold50784_9653-13746' '(at2g40140 : 481.0) CZF1; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: salt-inducible zinc finger 1 (TAIR:AT3G55980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36808 : 378.0) no description available & (reliability: 962.0) & (original description: Putative At2g40140, Description = Zinc finger CCCH domain-containing protein 29, PFAM = PF12796;PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.3scaffold103195_405-3472' '(at2g19810 : 313.0) CCCH-type zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT4G29190.1); Has 721 Blast hits to 690 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 6; Plants - 412; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36808 : 244.0) no description available & (reliability: 626.0) & (original description: Putative se2c5, Description = Zinc finger CCCH domain-containing protein 30, PFAM = )' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.3scaffold104069_530-3562' '(gnl|cdd|35348 : 143.0) no description available & (at3g47120 : 132.0) RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 3 (TAIR:AT5G61030.1); Has 201898 Blast hits to 124021 proteins in 4668 species: Archae - 159; Bacteria - 19385; Metazoa - 64482; Fungi - 8819; Plants - 85595; Viruses - 264; Other Eukaryotes - 23194 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative RBMX2, Description = RNA-binding motif protein, X-linked 2, PFAM = PF00076)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.5scaffold99_813983-820112' '(at3g12130 : 242.0) KH domain-containing protein / zinc finger (CCCH type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein / zinc finger (CCCH type) family protein (TAIR:AT5G06770.1); Has 1306 Blast hits to 1045 proteins in 139 species: Archae - 0; Bacteria - 4; Metazoa - 726; Fungi - 40; Plants - 423; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (reliability: 484.0) & (original description: Putative Os02g0194200, Description = Zinc finger CCCH domain-containing protein 14, PFAM = PF00013;PF00642;PF00642;PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.5scaffold213_1062921-1079072' '(q9swf9|zfnl_pea : 488.0) Zinc finger CCCH domain-containing protein ZFN-like - Pisum sativum (Garden pea) & (at3g02830 : 403.0) Encodes a zinc finger protein.; zinc finger protein 1 (ZFN1); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: zinc finger nuclease 3 (TAIR:AT5G16540.1); Has 1325 Blast hits to 706 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 147; Plants - 868; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|36890 : 94.6) no description available & (reliability: 806.0) & (original description: Putative ZFN1, Description = Zinc finger CCCH domain-containing protein ZFN-like, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.5scaffold2062_170746-173693' '(at5g07500 : 186.0) Encodes an embryo-specific zinc finger transcription factor required for heart-stage embryo formation.; PEI1; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: zinc finger (CCCH-type) family protein (TAIR:AT5G58620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36808 : 184.0) no description available & (reliability: 372.0) & (original description: Putative se2c5, Description = Zinc finger CCCH domain-containing protein 30, PFAM = )' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.5scaffold6198_1-2799' '(at2g19810 : 323.0) CCCH-type zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT4G29190.1); Has 721 Blast hits to 690 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 6; Plants - 412; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36808 : 267.0) no description available & (reliability: 646.0) & (original description: Putative se2c5, Description = Zinc finger CCCH domain-containing protein 30, PFAM = PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'nbv0.5scaffold8405_1478-5565' '(at2g40140 : 494.0) CZF1; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: salt-inducible zinc finger 1 (TAIR:AT3G55980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36808 : 371.0) no description available & (reliability: 988.0) & (original description: Putative At2g40140, Description = Zinc finger CCCH domain-containing protein 29, PFAM = PF12796;PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben044scf00002425ctg005_808-5188' '(at4g25440 : 340.0) zinc finger WD40 repeat protein 1 (ZFWD1); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: xylem; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, CCCH-type (InterPro:IPR000571), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G51980.1); Has 28356 Blast hits to 16036 proteins in 564 species: Archae - 44; Bacteria - 4332; Metazoa - 10522; Fungi - 6455; Plants - 3358; Viruses - 0; Other Eukaryotes - 3645 (source: NCBI BLink). & (gnl|cdd|35495 : 150.0) no description available & (gnl|cdd|29257 : 92.0) no description available & (reliability: 680.0) & (original description: Putative DR14, Description = Zinc finger CCCH domain-containing protein 48, PFAM = PF00642;PF00400;PF00400;PF00400)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben044scf00002898ctg000_7586-16151' '(at4g38890 : 822.0) FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity, zinc ion binding, nucleic acid binding; INVOLVED IN: oxidation reduction, tRNA processing, metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269), tRNA-dihydrouridine synthase, conserved site (InterPro:IPR018517); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G49640.1); Has 11364 Blast hits to 11268 proteins in 2588 species: Archae - 15; Bacteria - 7817; Metazoa - 496; Fungi - 531; Plants - 173; Viruses - 0; Other Eukaryotes - 2332 (source: NCBI BLink). & (gnl|cdd|37544 : 727.0) no description available & (gnl|cdd|73368 : 258.0) no description available & (reliability: 1644.0) & (original description: Putative dus3l, Description = tRNA-dihydrouridine synthase 3, PFAM = PF00642;PF01207)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben044scf00018227ctg005_947-6610' '(at3g12130 : 165.0) KH domain-containing protein / zinc finger (CCCH type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein / zinc finger (CCCH type) family protein (TAIR:AT5G06770.1); Has 1306 Blast hits to 1045 proteins in 139 species: Archae - 0; Bacteria - 4; Metazoa - 726; Fungi - 40; Plants - 423; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (reliability: 330.0) & (original description: Putative pco086234b, Description = Zinc finger C-x8-C-x5-C-x3-H type family protein, PFAM = PF00642;PF00642;PF14608;PF00013)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben044scf00027217ctg012_1563-4618' '(at2g19810 : 325.0) CCCH-type zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT4G29190.1); Has 721 Blast hits to 690 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 6; Plants - 412; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36808 : 264.0) no description available & (reliability: 650.0) & (original description: Putative se2c5, Description = Zinc finger CCCH domain-containing protein 2, PFAM = PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben044scf00029190ctg008_1132-7217' '(at5g43630 : 328.0) Encodes a zinc knuckle protein that negatively regulates morning specific growth. The role of TZP in hypocotyl elongation was established through a QTL analysis of BayXSha RIL populations. The Bay-0 allele contains a deletion causing a frameshift mutation. TZP is under circadian control and acts to regulate morning-specific hypocotyl growth.; TZP; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: growth, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Plus-3 domain, subgroup (InterPro:IPR018144), Plus-3 (InterPro:IPR004343), Zinc finger, CCHC-type (InterPro:IPR001878); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative PGSC0003DMG400001126, Description = Plus-3, PFAM = PF03126)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben044scf00031093ctg008_2136-5222' '(at2g19810 : 323.0) CCCH-type zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT4G29190.1); Has 721 Blast hits to 690 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 6; Plants - 412; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36808 : 275.0) no description available & (reliability: 646.0) & (original description: Putative se2c5, Description = Zinc finger CCCH domain-containing protein 30, PFAM = )' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben044scf00047171ctg002_164-4395' '(at2g41900 : 659.0) CCCH-type zinc finger protein with ARM repeat domain; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: CCCH-type zinc finger protein with ARM repeat domain (TAIR:AT5G12850.1); Has 5399 Blast hits to 3519 proteins in 384 species: Archae - 10; Bacteria - 312; Metazoa - 2497; Fungi - 280; Plants - 489; Viruses - 8; Other Eukaryotes - 1803 (source: NCBI BLink). & (gnl|cdd|36808 : 380.0) no description available & (reliability: 1318.0) & (original description: Putative At2g41900, Description = Zinc finger CCCH domain-containing protein 30, PFAM = PF00642;PF12796)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf00096_190787-196514' '(at5g06770 : 177.0) KH domain-containing protein / zinc finger (CCCH type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein / zinc finger (CCCH type) family protein (TAIR:AT3G12130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative Os02g0194200, Description = Zinc finger CCCH domain-containing protein 14, PFAM = PF00013;PF08352;PF08352;PF00642;PF00642;PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf00149_75426-85730' '(at5g01450 : 315.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G38185.2); Has 1494 Blast hits to 1490 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 838; Fungi - 48; Plants - 298; Viruses - 88; Other Eukaryotes - 222 (source: NCBI BLink). & (gnl|cdd|39476 : 102.0) no description available & (reliability: 588.0) & (original description: Putative BnaA03g17640D, Description = BnaA03g17640D protein, PFAM = PF16041;PF13920;PF16040)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf00282_90426-102397' '(at4g25440 : 442.0) zinc finger WD40 repeat protein 1 (ZFWD1); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: xylem; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, CCCH-type (InterPro:IPR000571), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G51980.1); Has 28356 Blast hits to 16036 proteins in 564 species: Archae - 44; Bacteria - 4332; Metazoa - 10522; Fungi - 6455; Plants - 3358; Viruses - 0; Other Eukaryotes - 3645 (source: NCBI BLink). & (gnl|cdd|35495 : 145.0) no description available & (gnl|cdd|29257 : 114.0) no description available & (reliability: 884.0) & (original description: Putative ZFWD1, Description = Zinc finger CCCH domain-containing protein 48, PFAM = PF00400;PF00400;PF00400;PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf00573_392401-396515' '(at5g58620 : 450.0) zinc finger (CCCH-type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: zinc finger (CCCH-type) family protein (TAIR:AT2G40140.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36808 : 372.0) no description available & (reliability: 900.0) & (original description: Putative At5g58620, Description = Zinc finger CCCH domain-containing protein 66, PFAM = PF12796;PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf00662_69119-73238' '(at2g38185 : 122.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G38220.1). & (reliability: 244.0) & (original description: Putative TCM_034755, Description = RING/U-box superfamily protein isoform 2, PFAM = PF16040;PF13920;PF16041)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf00735_329609-333814' '(at2g41900 : 648.0) CCCH-type zinc finger protein with ARM repeat domain; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: CCCH-type zinc finger protein with ARM repeat domain (TAIR:AT5G12850.1); Has 5399 Blast hits to 3519 proteins in 384 species: Archae - 10; Bacteria - 312; Metazoa - 2497; Fungi - 280; Plants - 489; Viruses - 8; Other Eukaryotes - 1803 (source: NCBI BLink). & (gnl|cdd|36808 : 385.0) no description available & (reliability: 1296.0) & (original description: Putative At2g41900, Description = Zinc finger CCCH domain-containing protein 30, PFAM = PF12796;PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf00981_388487-392493' '(at3g19360 : 206.0) Zinc finger (CCCH-type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type) family protein (TAIR:AT1G32360.1); Has 1128 Blast hits to 788 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 454; Fungi - 86; Plants - 385; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative BnaC01g33510D, Description = BnaC01g33510D protein, PFAM = PF00642;PF00642;PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf01426_376550-379833' '(gnl|cdd|36808 : 227.0) no description available & (at1g03790 : 225.0) Encodes SOMNUS (SOM), a nucleus-localized CCCH-type zinc finger protein. SOM negatively regulates light-dependent seed germination downstream of PIL5 (AT2G20180).; SOMNUS (SOM); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G44260.1); Has 3270 Blast hits to 1059 proteins in 150 species: Archae - 0; Bacteria - 0; Metazoa - 444; Fungi - 30; Plants - 421; Viruses - 3; Other Eukaryotes - 2372 (source: NCBI BLink). & (reliability: 450.0) & (original description: Putative se2c5, Description = Zinc finger CCCH domain-containing protein 2, PFAM = PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf01460_47227-51423' '(at1g68200 : 199.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G66810.1); Has 1170 Blast hits to 1062 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 455; Fungi - 97; Plants - 305; Viruses - 0; Other Eukaryotes - 313 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative At1g68200, Description = Zinc finger CCCH domain-containing protein 15, PFAM = PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf01719_110914-117907' '(at5g43630 : 240.0) Encodes a zinc knuckle protein that negatively regulates morning specific growth. The role of TZP in hypocotyl elongation was established through a QTL analysis of BayXSha RIL populations. The Bay-0 allele contains a deletion causing a frameshift mutation. TZP is under circadian control and acts to regulate morning-specific hypocotyl growth.; TZP; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: growth, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Plus-3 domain, subgroup (InterPro:IPR018144), Plus-3 (InterPro:IPR004343), Zinc finger, CCHC-type (InterPro:IPR001878); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 480.0) & (original description: Putative PGSC0003DMG400001126, Description = RNA polymerase-associated RTF1-like protein, PFAM = PF03126)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf01927_821433-824613' '(at2g19810 : 298.0) CCCH-type zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT4G29190.1); Has 721 Blast hits to 690 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 6; Plants - 412; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36808 : 245.0) no description available & (reliability: 596.0) & (original description: Putative se2c5, Description = Zinc finger CCCH domain-containing protein 30, PFAM = )' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf02286_137405-141744' '(at2g40140 : 477.0) CZF1; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: salt-inducible zinc finger 1 (TAIR:AT3G55980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36808 : 382.0) no description available & (reliability: 954.0) & (original description: Putative At2g40140, Description = Zinc finger CCCH domain-containing protein 29, PFAM = PF12796;PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf02700_54838-72737' '(at5g06770 : 148.0) KH domain-containing protein / zinc finger (CCCH type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein / zinc finger (CCCH type) family protein (TAIR:AT3G12130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative Os02g0194200, Description = Zinc finger CCCH domain-containing protein 14, PFAM = PF14608;PF00013;PF00642;PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf02793_2562654-2569563' '(at5g06770 : 182.0) KH domain-containing protein / zinc finger (CCCH type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein / zinc finger (CCCH type) family protein (TAIR:AT3G12130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative Os02g0194200, Description = Zinc finger CCCH domain-containing protein 14, PFAM = PF00013;PF00642;PF00642;PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf02798_512772-525694' '(q9swf9|zfnl_pea : 538.0) Zinc finger CCCH domain-containing protein ZFN-like - Pisum sativum (Garden pea) & (at3g02830 : 472.0) Encodes a zinc finger protein.; zinc finger protein 1 (ZFN1); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: zinc finger nuclease 3 (TAIR:AT5G16540.1); Has 1325 Blast hits to 706 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 147; Plants - 868; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|36890 : 123.0) no description available & (reliability: 944.0) & (original description: Putative ZFN1, Description = Zinc finger CCCH domain-containing protein 32, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf02822_262945-285960' '(q9swf9|zfnl_pea : 528.0) Zinc finger CCCH domain-containing protein ZFN-like - Pisum sativum (Garden pea) & (at3g02830 : 444.0) Encodes a zinc finger protein.; zinc finger protein 1 (ZFN1); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: zinc finger nuclease 3 (TAIR:AT5G16540.1); Has 1325 Blast hits to 706 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 147; Plants - 868; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|36890 : 113.0) no description available & (reliability: 888.0) & (original description: Putative ZFN1, Description = Zinc finger CCCH domain-containing protein 32, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf03035_251358-254641' '(at1g03790 : 243.0) Encodes SOMNUS (SOM), a nucleus-localized CCCH-type zinc finger protein. SOM negatively regulates light-dependent seed germination downstream of PIL5 (AT2G20180).; SOMNUS (SOM); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G44260.1); Has 3270 Blast hits to 1059 proteins in 150 species: Archae - 0; Bacteria - 0; Metazoa - 444; Fungi - 30; Plants - 421; Viruses - 3; Other Eukaryotes - 2372 (source: NCBI BLink). & (gnl|cdd|36808 : 229.0) no description available & (reliability: 486.0) & (original description: Putative se2c5, Description = Zinc finger CCCH domain-containing protein 2, PFAM = PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf03077_267379-273351' '(at2g38185 : 125.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G38220.1). & (reliability: 250.0) & (original description: Putative TCM_034755, Description = RING/U-box superfamily protein isoform 2, PFAM = PF16040;PF16041;PF13920)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf03438_535444-539775' '(at2g41900 : 658.0) CCCH-type zinc finger protein with ARM repeat domain; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: CCCH-type zinc finger protein with ARM repeat domain (TAIR:AT5G12850.1); Has 5399 Blast hits to 3519 proteins in 384 species: Archae - 10; Bacteria - 312; Metazoa - 2497; Fungi - 280; Plants - 489; Viruses - 8; Other Eukaryotes - 1803 (source: NCBI BLink). & (gnl|cdd|36808 : 384.0) no description available & (reliability: 1316.0) & (original description: Putative At2g41900, Description = Zinc finger CCCH domain-containing protein 30, PFAM = PF12796;PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf03824_77102-83648' '(at5g43630 : 256.0) Encodes a zinc knuckle protein that negatively regulates morning specific growth. The role of TZP in hypocotyl elongation was established through a QTL analysis of BayXSha RIL populations. The Bay-0 allele contains a deletion causing a frameshift mutation. TZP is under circadian control and acts to regulate morning-specific hypocotyl growth.; TZP; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: growth, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Plus-3 domain, subgroup (InterPro:IPR018144), Plus-3 (InterPro:IPR004343), Zinc finger, CCHC-type (InterPro:IPR001878); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 512.0) & (original description: Putative PGSC0003DMG400001126, Description = Plus-3, PFAM = PF03126)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf04028_104479-107636' '(at2g19810 : 323.0) CCCH-type zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT4G29190.1); Has 721 Blast hits to 690 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 6; Plants - 412; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36808 : 273.0) no description available & (reliability: 646.0) & (original description: Putative se2c5, Description = Zinc finger CCCH domain-containing protein 30, PFAM = PF14608;PF14608)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf06394_470212-473469' '(at1g66810 : 201.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G68200.1); Has 998 Blast hits to 914 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 425; Fungi - 99; Plants - 223; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative At1g66810, Description = Zinc finger CCCH domain-containing protein 14, PFAM = PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf06661_355343-360870' '(at5g06770 : 183.0) KH domain-containing protein / zinc finger (CCCH type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein / zinc finger (CCCH type) family protein (TAIR:AT3G12130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative Os04g0665700, Description = Zinc finger CCCH domain-containing protein 31, PFAM = PF00013;PF00642;PF00642;PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf06865_17149-20096' '(at5g07500 : 186.0) Encodes an embryo-specific zinc finger transcription factor required for heart-stage embryo formation.; PEI1; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: zinc finger (CCCH-type) family protein (TAIR:AT5G58620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36808 : 186.0) no description available & (reliability: 372.0) & (original description: Putative se2c5, Description = Zinc finger CCCH domain-containing protein 30, PFAM = )' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf07829_293861-299101' '(at3g19360 : 91.7) Zinc finger (CCCH-type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type) family protein (TAIR:AT1G32360.1); Has 1128 Blast hits to 788 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 454; Fungi - 86; Plants - 385; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative , Description = , PFAM = PF00642;PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf08290_62690-65943' '(at2g19810 : 309.0) CCCH-type zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT4G29190.1); Has 721 Blast hits to 690 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 6; Plants - 412; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|36808 : 262.0) no description available & (reliability: 618.0) & (original description: Putative se2c5, Description = Zinc finger CCCH domain-containing protein 30, PFAM = PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf09133_138299-144063' '(at5g06770 : 176.0) KH domain-containing protein / zinc finger (CCCH type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein / zinc finger (CCCH type) family protein (TAIR:AT3G12130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative Os02g0194200, Description = Zinc finger CCCH domain-containing protein 14, PFAM = PF00642;PF00642;PF00642;PF00013)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf10217_272535-276519' '(at3g19360 : 205.0) Zinc finger (CCCH-type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type) family protein (TAIR:AT1G32360.1); Has 1128 Blast hits to 788 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 454; Fungi - 86; Plants - 385; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink). & (reliability: 410.0) & (original description: Putative BnaC01g33510D, Description = BnaC01g33510D protein, PFAM = PF00642;PF00642;PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf10919_198059-206729' '(at4g38890 : 842.0) FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity, zinc ion binding, nucleic acid binding; INVOLVED IN: oxidation reduction, tRNA processing, metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269), tRNA-dihydrouridine synthase, conserved site (InterPro:IPR018517); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G49640.1); Has 11364 Blast hits to 11268 proteins in 2588 species: Archae - 15; Bacteria - 7817; Metazoa - 496; Fungi - 531; Plants - 173; Viruses - 0; Other Eukaryotes - 2332 (source: NCBI BLink). & (gnl|cdd|37544 : 730.0) no description available & (gnl|cdd|73368 : 259.0) no description available & (reliability: 1684.0) & (original description: Putative dus3l, Description = tRNA-dihydrouridine synthase 3, PFAM = PF01207;PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf11000_143719-147809' '(at2g41900 : 702.0) CCCH-type zinc finger protein with ARM repeat domain; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: CCCH-type zinc finger protein with ARM repeat domain (TAIR:AT5G12850.1); Has 5399 Blast hits to 3519 proteins in 384 species: Archae - 10; Bacteria - 312; Metazoa - 2497; Fungi - 280; Plants - 489; Viruses - 8; Other Eukaryotes - 1803 (source: NCBI BLink). & (gnl|cdd|36808 : 387.0) no description available & (reliability: 1404.0) & (original description: Putative At5g58620, Description = Zinc finger CCCH domain-containing protein 66, PFAM = PF00642;PF12796)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf11491_14289-30082' '(at3g47120 : 224.0) RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 3 (TAIR:AT5G61030.1); Has 201898 Blast hits to 124021 proteins in 4668 species: Archae - 159; Bacteria - 19385; Metazoa - 64482; Fungi - 8819; Plants - 85595; Viruses - 264; Other Eukaryotes - 23194 (source: NCBI BLink). & (gnl|cdd|35348 : 203.0) no description available & (reliability: 448.0) & (original description: Putative CZF1, Description = CCCH-type zinc finger protein, PFAM = PF00076;PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf13231_245629-249890' '(at2g41900 : 663.0) CCCH-type zinc finger protein with ARM repeat domain; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: CCCH-type zinc finger protein with ARM repeat domain (TAIR:AT5G12850.1); Has 5399 Blast hits to 3519 proteins in 384 species: Archae - 10; Bacteria - 312; Metazoa - 2497; Fungi - 280; Plants - 489; Viruses - 8; Other Eukaryotes - 1803 (source: NCBI BLink). & (gnl|cdd|36808 : 392.0) no description available & (reliability: 1326.0) & (original description: Putative At2g41900, Description = Zinc finger CCCH domain-containing protein 30, PFAM = PF12796;PF00642)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf13683_128724-138060' '(at3g12130 : 168.0) KH domain-containing protein / zinc finger (CCCH type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein / zinc finger (CCCH type) family protein (TAIR:AT5G06770.1); Has 1306 Blast hits to 1045 proteins in 139 species: Archae - 0; Bacteria - 4; Metazoa - 726; Fungi - 40; Plants - 423; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative pco086234b, Description = Zinc finger C-x8-C-x5-C-x3-H type family protein, PFAM = PF00642;PF00642;PF14608;PF00013)' T '27.3.12' 'RNA.regulation of transcription.C3H zinc finger family' 'niben101scf18157_2764-6719' '(at1g68200 : 187.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G66810.1); Has 1170 Blast hits to 1062 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 455; Fungi - 97; Plants - 305; Viruses - 0; Other Eukaryotes - 313 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative At1g68200, Description = Zinc finger CCCH domain-containing protein 15, PFAM = PF00642)' T '27.3.13' 'RNA.regulation of transcription.CCAAT box binding factor family, DR1' 'nbv0.3scaffold5813_57460-63220' '(at5g23090 : 201.0) "nuclear factor Y, subunit B13" (NF-YB13); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B12 (TAIR:AT5G08190.2); Has 1502 Blast hits to 1502 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 491; Fungi - 387; Plants - 520; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|36089 : 155.0) no description available & (gnl|cdd|34751 : 95.5) no description available & (reliability: 402.0) & (original description: Putative DR1, Description = Protein Dr1 homolog, PFAM = PF00808)' T '27.3.13' 'RNA.regulation of transcription.CCAAT box binding factor family, DR1' 'nbv0.5scaffold6573_77998-92923' '(at1g72440 : 877.0) Encodes SLOW WALKER2 (SWA2), a NOC1/Mak21 homologue. Essential for coordinated cell cycle progression during female gametophyte development.; embryo sac development arrest 25 (EDA25); INVOLVED IN: polar nucleus fusion, embryo sac development; LOCATED IN: nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding factor (InterPro:IPR005612); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37249 : 684.0) no description available & (gnl|cdd|35152 : 259.0) no description available & (reliability: 1754.0) & (original description: Putative Os09g0116400, Description = CCAAT-box-binding transcription factor-like protein, PFAM = PF03914)' T '27.3.13' 'RNA.regulation of transcription.CCAAT box binding factor family, DR1' 'niben101scf01764_218968-226864' '(at5g23090 : 217.0) "nuclear factor Y, subunit B13" (NF-YB13); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B12 (TAIR:AT5G08190.2); Has 1502 Blast hits to 1502 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 491; Fungi - 387; Plants - 520; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|36089 : 167.0) no description available & (gnl|cdd|34751 : 107.0) no description available & (reliability: 434.0) & (original description: Putative DR1, Description = Protein Dr1 homolog, PFAM = PF00808)' T '27.3.13' 'RNA.regulation of transcription.CCAAT box binding factor family, DR1' 'niben101scf02632_33692-38846' '(at5g23090 : 222.0) "nuclear factor Y, subunit B13" (NF-YB13); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B12 (TAIR:AT5G08190.2); Has 1502 Blast hits to 1502 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 491; Fungi - 387; Plants - 520; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|36089 : 170.0) no description available & (gnl|cdd|34751 : 107.0) no description available & (reliability: 444.0) & (original description: Putative DR1, Description = Protein Dr1 homolog, PFAM = PF00808)' T '27.3.13' 'RNA.regulation of transcription.CCAAT box binding factor family, DR1' 'niben101scf08407_99000-114077' '(at1g72440 : 872.0) Encodes SLOW WALKER2 (SWA2), a NOC1/Mak21 homologue. Essential for coordinated cell cycle progression during female gametophyte development.; embryo sac development arrest 25 (EDA25); INVOLVED IN: polar nucleus fusion, embryo sac development; LOCATED IN: nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding factor (InterPro:IPR005612); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37249 : 718.0) no description available & (gnl|cdd|35152 : 251.0) no description available & (reliability: 1744.0) & (original description: Putative EDA25, Description = Protein SLOW WALKER2, PFAM = PF03914)' T '27.3.13' 'RNA.regulation of transcription.CCAAT box binding factor family, DR1' 'niben101scf08442_48710-55118' '(at5g23090 : 221.0) "nuclear factor Y, subunit B13" (NF-YB13); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B12 (TAIR:AT5G08190.2); Has 1502 Blast hits to 1502 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 491; Fungi - 387; Plants - 520; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|36089 : 168.0) no description available & (gnl|cdd|34751 : 107.0) no description available & (reliability: 442.0) & (original description: Putative DR1, Description = Protein Dr1 homolog, PFAM = PF00808)' T '27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'nbv0.3scaffold804_75288-79624' '(at1g54160 : 119.0) Encodes a member of the CCAAT-binding transcription factor (CBF-B/NF-YA) family. Expression is upregulated in response to ABA and drought. This regulation appears to be mediated by MIR169A which is downregulated in response to drought. NFYA5 is a target of MIR169A. Loss of function mutations are hypersensitive to drought.; "nuclear factor Y, subunit A5" (NF-YA5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, specific transcriptional repressor activity; INVOLVED IN: response to water deprivation, negative regulation of gene-specific transcription, regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A6 (TAIR:AT3G14020.1); Has 683 Blast hits to 683 proteins in 160 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 133; Plants - 381; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|36774 : 105.0) no description available & (gnl|cdd|47823 : 103.0) no description available & (reliability: 238.0) & (original description: Putative rapB, Description = RAPB protein, PFAM = PF02045)' T '27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'nbv0.3scaffold21021_20894-29039' '(at3g05690 : 140.0) Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.; "nuclear factor Y, subunit A2" (NF-YA2); CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A10 (TAIR:AT5G06510.2); Has 655 Blast hits to 655 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 138; Fungi - 132; Plants - 359; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|47823 : 101.0) no description available & (gnl|cdd|36774 : 99.1) no description available & (reliability: 280.0) & (original description: Putative rapB, Description = CCAAT-binding transcription factor, PFAM = PF02045)' T '27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'nbv0.3scaffold27125_1077-6136' '(at1g72830 : 133.0) Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.; "nuclear factor Y, subunit A3" (NF-YA3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A8 (TAIR:AT1G17590.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47823 : 108.0) no description available & (gnl|cdd|36774 : 104.0) no description available & (reliability: 266.0) & (original description: Putative umc1568, Description = CCAAT-HAP2 transcription factor, PFAM = PF02045)' T '27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'nbv0.3scaffold47193_3917-10776' '(at1g72830 : 128.0) Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.; "nuclear factor Y, subunit A3" (NF-YA3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A8 (TAIR:AT1G17590.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36774 : 108.0) no description available & (gnl|cdd|47823 : 101.0) no description available & (reliability: 256.0) & (original description: Putative rapB, Description = Nuclear transcription factor Y subunit A-3, PFAM = PF02045)' T '27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'nbv0.3scaffold68075_1-4976' '(at5g06510 : 131.0) "nuclear factor Y, subunit A10" (NF-YA10); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus; EXPRESSED IN: stem, vascular tissue, embryo, leaf whorl, seed; EXPRESSED DURING: F mature embryo stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A2 (TAIR:AT3G05690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47823 : 97.3) no description available & (gnl|cdd|36774 : 95.3) no description available & (reliability: 262.0) & (original description: Putative rapB, Description = CCAAT-binding factor, conserved site-containing protein, PFAM = PF02045)' T '27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'nbv0.5scaffold2683_92529-99546' '(at5g12840 : 152.0) Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.; "nuclear factor Y, subunit A1" (NF-YA1); CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A9 (TAIR:AT3G20910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36774 : 98.0) no description available & (gnl|cdd|47823 : 97.0) no description available & (reliability: 304.0) & (original description: Putative NFYA1, Description = Nuclear transcription factor Y subunit A-1, PFAM = PF02045)' T '27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'nbv0.5scaffold7563_46671-55330' '(at1g30500 : 131.0) "nuclear factor Y, subunit A7" (NF-YA7); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, specific transcriptional repressor activity; INVOLVED IN: negative regulation of gene-specific transcription, regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A4 (TAIR:AT2G34720.1); Has 681 Blast hits to 681 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 130; Plants - 381; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|36774 : 89.9) no description available & (gnl|cdd|47823 : 88.9) no description available & (reliability: 262.0) & (original description: Putative NFYA7, Description = Nuclear transcription factor Y subunit A-7, PFAM = PF02045)' T '27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'niben044scf00022852ctg008_120-4577' '(at1g17590 : 129.0) "nuclear factor Y, subunit A8" (NF-YA8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus, chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A3 (TAIR:AT1G72830.1). & (gnl|cdd|36774 : 107.0) no description available & (gnl|cdd|47823 : 102.0) no description available & (reliability: 258.0) & (original description: Putative rapB, Description = Nuclear transcription factor Y subunit A-3, PFAM = PF02045)' T '27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'niben101scf00088_141693-150608' '(at1g30500 : 137.0) "nuclear factor Y, subunit A7" (NF-YA7); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, specific transcriptional repressor activity; INVOLVED IN: negative regulation of gene-specific transcription, regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A4 (TAIR:AT2G34720.1); Has 681 Blast hits to 681 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 130; Plants - 381; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|47823 : 98.9) no description available & (gnl|cdd|36774 : 97.2) no description available & (reliability: 274.0) & (original description: Putative NFYA7, Description = Nuclear transcription factor Y subunit A-7, PFAM = PF02045)' T '27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'niben101scf00781_769972-777469' '(gnl|cdd|36774 : 111.0) no description available & (gnl|cdd|47823 : 106.0) no description available & (at1g17590 : 97.1) "nuclear factor Y, subunit A8" (NF-YA8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus, chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A3 (TAIR:AT1G72830.1). & (reliability: 194.2) & (original description: Putative rapB, Description = CCAAT-binding transcription factor, PFAM = PF02045)' T '27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'niben101scf00911_145875-151468' '(at5g06510 : 133.0) "nuclear factor Y, subunit A10" (NF-YA10); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus; EXPRESSED IN: stem, vascular tissue, embryo, leaf whorl, seed; EXPRESSED DURING: F mature embryo stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A2 (TAIR:AT3G05690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47823 : 96.6) no description available & (gnl|cdd|36774 : 94.5) no description available & (reliability: 266.0) & (original description: Putative rapB, Description = CCAAT-HAP2 transcription factor, PFAM = PF02045)' T '27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'niben101scf02425_120515-125075' '(at3g14020 : 137.0) "nuclear factor Y, subunit A6" (NF-YA6); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A5 (TAIR:AT1G54160.1); Has 683 Blast hits to 683 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 132; Plants - 380; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|36774 : 110.0) no description available & (gnl|cdd|47823 : 107.0) no description available & (reliability: 274.0) & (original description: Putative rapB, Description = RAPB protein, PFAM = PF02045)' T '27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'niben101scf04323_393493-400950' '(at1g30500 : 91.3) "nuclear factor Y, subunit A7" (NF-YA7); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, specific transcriptional repressor activity; INVOLVED IN: negative regulation of gene-specific transcription, regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A4 (TAIR:AT2G34720.1); Has 681 Blast hits to 681 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 130; Plants - 381; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative NFYA1, Description = Nuclear transcription factor Y subunit A-7, PFAM = PF02045)' T '27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'niben101scf04869_794681-799858' '(at5g12840 : 146.0) Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.; "nuclear factor Y, subunit A1" (NF-YA1); CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A9 (TAIR:AT3G20910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36774 : 106.0) no description available & (gnl|cdd|47823 : 100.0) no description available & (reliability: 292.0) & (original description: Putative rapB, Description = Nuclear transcription factor Y subunit A-1, PFAM = PF02045)' T '27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'niben101scf05694_66683-74828' '(at3g05690 : 122.0) Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.; "nuclear factor Y, subunit A2" (NF-YA2); CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A10 (TAIR:AT5G06510.2); Has 655 Blast hits to 655 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 138; Fungi - 132; Plants - 359; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|47823 : 102.0) no description available & (gnl|cdd|36774 : 98.0) no description available & (reliability: 244.0) & (original description: Putative nf-YA, Description = YA1, PFAM = PF02045)' T '27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'niben101scf09296_260802-282296' '(at1g72830 : 99.8) Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.; "nuclear factor Y, subunit A3" (NF-YA3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A8 (TAIR:AT1G17590.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47823 : 98.9) no description available & (gnl|cdd|36774 : 98.0) no description available & (reliability: 199.6) & (original description: Putative rapB, Description = CCAAT-binding transcription factor, PFAM = PF02045)' T '27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'niben101scf10191_196893-205997' '(at1g72830 : 129.0) Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.; "nuclear factor Y, subunit A3" (NF-YA3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A8 (TAIR:AT1G17590.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47823 : 108.0) no description available & (gnl|cdd|36774 : 104.0) no description available & (reliability: 258.0) & (original description: Putative umc1568, Description = CCAAT-HAP2 transcription factor, PFAM = PF02045)' T '27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'niben101scf10498_132661-139860' '(at5g12840 : 159.0) Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.; "nuclear factor Y, subunit A1" (NF-YA1); CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A9 (TAIR:AT3G20910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36774 : 99.0) no description available & (gnl|cdd|47823 : 97.7) no description available & (reliability: 318.0) & (original description: Putative NFYA1, Description = Nuclear transcription factor Y subunit A-1, PFAM = PF02045)' T '27.3.14' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP2' 'niben101scf13231_57903-67226' '(gnl|cdd|36774 : 105.0) no description available & (gnl|cdd|47823 : 101.0) no description available & (at5g12840 : 96.7) Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.; "nuclear factor Y, subunit A1" (NF-YA1); CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A9 (TAIR:AT3G20910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative rapB, Description = CCAAT-binding transcription factor, PFAM = PF02045)' T '27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'nbv0.3scaffold28783_515-3120' '(gnl|cdd|36087 : 179.0) no description available & (at4g14540 : 174.0) "nuclear factor Y, subunit B3" (NF-YB3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B2 (TAIR:AT5G47640.1); Has 1532 Blast hits to 1532 proteins in 250 species: Archae - 0; Bacteria - 1; Metazoa - 503; Fungi - 375; Plants - 529; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (q60eq4|nfyb3_orysa : 164.0) Nuclear transcription factor Y subunit B-3 (OsNF-YB-3) (Transcriptional activator HAP3B) - Oryza sativa (Rice) & (gnl|cdd|64661 : 97.2) no description available & (reliability: 348.0) & (original description: Putative NFYA, Description = Nuclear transcription factor Y-alpha, PFAM = PF00808)' T '27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'nbv0.3scaffold34434_655-4226' '(at2g37060 : 219.0) "nuclear factor Y, subunit B8" (NF-YB8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B10 (TAIR:AT3G53340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36087 : 204.0) no description available & (p25209|nfyb_maize : 197.0) Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) & (gnl|cdd|64661 : 94.1) no description available & (reliability: 438.0) & (original description: Putative NFYB8, Description = Nuclear transcription factor Y subunit B-8, PFAM = PF00808)' T '27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'nbv0.5scaffold1331_316286-321257' '(at5g47670 : 197.0) Encodes LEC1-Like (L1L), closely related to LEC1 (Leafy Cotyledon1). Functions as a regulator of embryo development.; "nuclear factor Y, subunit B6" (NF-YB6); FUNCTIONS IN: transcription activator binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of gene-specific transcription, regulation of transcription; LOCATED IN: intracellular, nucleus; EXPRESSED IN: embryo; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT1G21970.1); Has 1453 Blast hits to 1453 proteins in 242 species: Archae - 2; Bacteria - 0; Metazoa - 485; Fungi - 345; Plants - 522; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (gnl|cdd|36087 : 187.0) no description available & (p25209|nfyb_maize : 147.0) Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) & (gnl|cdd|64661 : 90.6) no description available & (reliability: 394.0) & (original description: Putative l1l, Description = Leafy cotyledon 1-like protein, PFAM = PF00808)' T '27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'nbv0.5scaffold8364_23192-26715' '(gnl|cdd|36087 : 185.0) no description available & (at4g14540 : 172.0) "nuclear factor Y, subunit B3" (NF-YB3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B2 (TAIR:AT5G47640.1); Has 1532 Blast hits to 1532 proteins in 250 species: Archae - 0; Bacteria - 1; Metazoa - 503; Fungi - 375; Plants - 529; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (q60eq4|nfyb3_orysa : 167.0) Nuclear transcription factor Y subunit B-3 (OsNF-YB-3) (Transcriptional activator HAP3B) - Oryza sativa (Rice) & (gnl|cdd|64661 : 99.9) no description available & (reliability: 344.0) & (original description: Putative NFYB7, Description = Nuclear transcription factor Y subunit B-7, PFAM = PF00808)' T '27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben044scf00000396ctg001_1772-4759' '(gnl|cdd|36087 : 184.0) no description available & (at2g13570 : 170.0) "nuclear factor Y, subunit B7" (NF-YB7); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Histone-fold (InterPro:IPR009072), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B3 (TAIR:AT4G14540.1); Has 1909 Blast hits to 1888 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 587; Fungi - 414; Plants - 527; Viruses - 0; Other Eukaryotes - 381 (source: NCBI BLink). & (p25209|nfyb_maize : 164.0) Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) & (gnl|cdd|64661 : 97.2) no description available & (reliability: 340.0) & (original description: Putative HAP3, Description = Nuclear transcription factor Y subunit B-3, PFAM = PF00808)' T '27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben044scf00061291ctg000_1-1072' '(at4g14540 : 208.0) "nuclear factor Y, subunit B3" (NF-YB3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B2 (TAIR:AT5G47640.1); Has 1532 Blast hits to 1532 proteins in 250 species: Archae - 0; Bacteria - 1; Metazoa - 503; Fungi - 375; Plants - 529; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36087 : 198.0) no description available & (q60eq4|nfyb3_orysa : 171.0) Nuclear transcription factor Y subunit B-3 (OsNF-YB-3) (Transcriptional activator HAP3B) - Oryza sativa (Rice) & (gnl|cdd|64661 : 90.6) no description available & (reliability: 416.0) & (original description: Putative NFYB1, Description = Nuclear transcription factor Y subunit B-1, PFAM = PF00808)' T '27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf00341_280998-283543' '(at4g14540 : 199.0) "nuclear factor Y, subunit B3" (NF-YB3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B2 (TAIR:AT5G47640.1); Has 1532 Blast hits to 1532 proteins in 250 species: Archae - 0; Bacteria - 1; Metazoa - 503; Fungi - 375; Plants - 529; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36087 : 193.0) no description available & (q60eq4|nfyb3_orysa : 167.0) Nuclear transcription factor Y subunit B-3 (OsNF-YB-3) (Transcriptional activator HAP3B) - Oryza sativa (Rice) & (gnl|cdd|64661 : 91.8) no description available & (reliability: 398.0) & (original description: Putative BnaC01g35600D, Description = BnaC01g35600D protein, PFAM = PF00808)' T '27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf00919_129135-131740' '(gnl|cdd|36087 : 179.0) no description available & (at4g14540 : 174.0) "nuclear factor Y, subunit B3" (NF-YB3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B2 (TAIR:AT5G47640.1); Has 1532 Blast hits to 1532 proteins in 250 species: Archae - 0; Bacteria - 1; Metazoa - 503; Fungi - 375; Plants - 529; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (q60eq4|nfyb3_orysa : 163.0) Nuclear transcription factor Y subunit B-3 (OsNF-YB-3) (Transcriptional activator HAP3B) - Oryza sativa (Rice) & (gnl|cdd|64661 : 96.4) no description available & (reliability: 348.0) & (original description: Putative HAP3, Description = Nuclear transcription factor Y subunit B-3, PFAM = PF00808)' T '27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf01548_96029-98961' '(at4g14540 : 120.0) "nuclear factor Y, subunit B3" (NF-YB3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B2 (TAIR:AT5G47640.1); Has 1532 Blast hits to 1532 proteins in 250 species: Archae - 0; Bacteria - 1; Metazoa - 503; Fungi - 375; Plants - 529; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36087 : 109.0) no description available & (q5qmg3|nfyb2_orysa : 95.9) Nuclear transcription factor Y subunit B-2 (OsNF-YB-2) (Transcriptional activator HAP3A) - Oryza sativa (Rice) & (reliability: 240.0) & (original description: Putative HAP3, Description = Nuclear transcription factor Y subunit B-3, PFAM = PF00808)' T '27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf01818_294246-304044' '(at3g53340 : 198.0) "nuclear factor Y, subunit B10" (NF-YB10); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B8 (TAIR:AT2G37060.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36087 : 197.0) no description available & (p25209|nfyb_maize : 183.0) Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) & (gnl|cdd|64661 : 93.7) no description available & (reliability: 396.0) & (original description: Putative NFYB8, Description = Nuclear transcription factor Y subunit B-8, PFAM = PF00808)' T '27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf02042_219755-222237' '(gnl|cdd|36087 : 176.0) no description available & (at2g47810 : 166.0) "nuclear factor Y, subunit B5" (NF-YB5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: sepal, male gametophyte, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B3 (TAIR:AT4G14540.1); Has 1476 Blast hits to 1476 proteins in 244 species: Archae - 0; Bacteria - 0; Metazoa - 483; Fungi - 353; Plants - 526; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (q5qmg3|nfyb2_orysa : 149.0) Nuclear transcription factor Y subunit B-2 (OsNF-YB-2) (Transcriptional activator HAP3A) - Oryza sativa (Rice) & (gnl|cdd|64661 : 87.2) no description available & (reliability: 332.0) & (original description: Putative NFYB4, Description = Nuclear transcription factor Y subunit B-4, PFAM = PF00808)' T '27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf02510_612672-618061' '(at2g27470 : 100.0) "nuclear factor Y, subunit B11" (NF-YB11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B1 (TAIR:AT2G38880.7); Has 148542 Blast hits to 60498 proteins in 2540 species: Archae - 708; Bacteria - 15552; Metazoa - 38569; Fungi - 16830; Plants - 7103; Viruses - 1761; Other Eukaryotes - 68019 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative glysoja_008179, Description = DNA polymerase epsilon subunit 3, PFAM = PF00808)' T '27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf02752_1496710-1499105' '(gnl|cdd|36087 : 169.0) no description available & (at2g47810 : 160.0) "nuclear factor Y, subunit B5" (NF-YB5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: sepal, male gametophyte, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B3 (TAIR:AT4G14540.1); Has 1476 Blast hits to 1476 proteins in 244 species: Archae - 0; Bacteria - 0; Metazoa - 483; Fungi - 353; Plants - 526; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (p25209|nfyb_maize : 136.0) Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) & (gnl|cdd|64661 : 84.5) no description available & (reliability: 320.0) & (original description: Putative Hd5, Description = Nuclear transcription factor Y subunit B-3, PFAM = PF00808)' T '27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf03255_231831-236822' '(at5g47670 : 197.0) Encodes LEC1-Like (L1L), closely related to LEC1 (Leafy Cotyledon1). Functions as a regulator of embryo development.; "nuclear factor Y, subunit B6" (NF-YB6); FUNCTIONS IN: transcription activator binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of gene-specific transcription, regulation of transcription; LOCATED IN: intracellular, nucleus; EXPRESSED IN: embryo; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT1G21970.1); Has 1453 Blast hits to 1453 proteins in 242 species: Archae - 2; Bacteria - 0; Metazoa - 485; Fungi - 345; Plants - 522; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (gnl|cdd|36087 : 187.0) no description available & (p25209|nfyb_maize : 149.0) Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) & (gnl|cdd|64661 : 90.6) no description available & (reliability: 394.0) & (original description: Putative l1l, Description = Leafy cotyledon 1-like protein, PFAM = PF00808)' T '27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf04207_129589-138394' '(at2g37060 : 236.0) "nuclear factor Y, subunit B8" (NF-YB8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B10 (TAIR:AT3G53340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p25209|nfyb_maize : 205.0) Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) & (gnl|cdd|36087 : 205.0) no description available & (gnl|cdd|64661 : 94.9) no description available & (reliability: 472.0) & (original description: Putative NFYB8, Description = Nuclear transcription factor Y subunit B-8, PFAM = PF00808)' T '27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf06132_143860-146189' '(gnl|cdd|36087 : 156.0) no description available & (at1g09030 : 147.0) "nuclear factor Y, subunit B4" (NF-YB4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B5 (TAIR:AT2G47810.1); Has 1487 Blast hits to 1487 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 489; Fungi - 373; Plants - 505; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink). & (p25209|nfyb_maize : 120.0) Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) & (reliability: 294.0) & (original description: Putative NFYA, Description = Nuclear transcription factor Y subunit B-3, PFAM = PF00808)' T '27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf07205_33106-38761' '(at3g53340 : 193.0) "nuclear factor Y, subunit B10" (NF-YB10); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B8 (TAIR:AT2G37060.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36087 : 190.0) no description available & (p25209|nfyb_maize : 185.0) Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) & (gnl|cdd|64661 : 92.2) no description available & (reliability: 386.0) & (original description: Putative HAP3, Description = Nuclear transcription factor Y subunit B-3, PFAM = PF00808)' T '27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf08836_20837-24805' '(gnl|cdd|36087 : 149.0) no description available & (at5g47670 : 134.0) Encodes LEC1-Like (L1L), closely related to LEC1 (Leafy Cotyledon1). Functions as a regulator of embryo development.; "nuclear factor Y, subunit B6" (NF-YB6); FUNCTIONS IN: transcription activator binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of gene-specific transcription, regulation of transcription; LOCATED IN: intracellular, nucleus; EXPRESSED IN: embryo; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT1G21970.1); Has 1453 Blast hits to 1453 proteins in 242 species: Archae - 2; Bacteria - 0; Metazoa - 485; Fungi - 345; Plants - 522; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (q65xk1|nfyb4_orysa : 117.0) Nuclear transcription factor Y subunit B-4 (OsNF-YB-4) (Transcriptional activator HAP3C) - Oryza sativa (Rice) & (reliability: 268.0) & (original description: Putative LEC1A, Description = Leafy cotyledon 1A, PFAM = PF00808)' T '27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf10287_124746-127141' '(at4g14540 : 208.0) "nuclear factor Y, subunit B3" (NF-YB3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B2 (TAIR:AT5G47640.1); Has 1532 Blast hits to 1532 proteins in 250 species: Archae - 0; Bacteria - 1; Metazoa - 503; Fungi - 375; Plants - 529; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36087 : 197.0) no description available & (q60eq4|nfyb3_orysa : 171.0) Nuclear transcription factor Y subunit B-3 (OsNF-YB-3) (Transcriptional activator HAP3B) - Oryza sativa (Rice) & (gnl|cdd|64661 : 90.2) no description available & (reliability: 416.0) & (original description: Putative NFYB1, Description = Nuclear transcription factor Y subunit B-1, PFAM = PF00808)' T '27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf11037_71805-74251' '(gnl|cdd|36087 : 181.0) no description available & (at2g47810 : 168.0) "nuclear factor Y, subunit B5" (NF-YB5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: sepal, male gametophyte, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B3 (TAIR:AT4G14540.1); Has 1476 Blast hits to 1476 proteins in 244 species: Archae - 0; Bacteria - 0; Metazoa - 483; Fungi - 353; Plants - 526; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (q5qmg3|nfyb2_orysa : 148.0) Nuclear transcription factor Y subunit B-2 (OsNF-YB-2) (Transcriptional activator HAP3A) - Oryza sativa (Rice) & (gnl|cdd|64661 : 87.2) no description available & (reliability: 336.0) & (original description: Putative NFYB1, Description = Nuclear transcription factor Y subunit B-1, PFAM = PF00808)' T '27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf11386_49738-53261' '(gnl|cdd|36087 : 187.0) no description available & (at4g14540 : 173.0) "nuclear factor Y, subunit B3" (NF-YB3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B2 (TAIR:AT5G47640.1); Has 1532 Blast hits to 1532 proteins in 250 species: Archae - 0; Bacteria - 1; Metazoa - 503; Fungi - 375; Plants - 529; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (p25209|nfyb_maize : 166.0) Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) & (gnl|cdd|64661 : 99.5) no description available & (reliability: 346.0) & (original description: Putative HAP3, Description = Nuclear transcription factor Y subunit B-3, PFAM = PF00808)' T '27.3.15' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP3' 'niben101scf15116_137267-143211' '(gnl|cdd|36087 : 191.0) no description available & (at2g37060 : 186.0) "nuclear factor Y, subunit B8" (NF-YB8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B10 (TAIR:AT3G53340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q60eq4|nfyb3_orysa : 184.0) Nuclear transcription factor Y subunit B-3 (OsNF-YB-3) (Transcriptional activator HAP3B) - Oryza sativa (Rice) & (gnl|cdd|64661 : 88.3) no description available & (reliability: 372.0) & (original description: Putative NFYB8, Description = Nuclear transcription factor Y subunit B-8, PFAM = PF00808)' T '27.3.16' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP5' 'niben044scf00000193ctg004_398-2053' '(at1g54830 : 115.0) "nuclear factor Y, subunit C3" (NF-YC3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C9 (TAIR:AT1G08970.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34805 : 112.0) no description available & (gnl|cdd|36870 : 107.0) no description available & (reliability: 230.0) & (original description: Putative Os04g0683400, Description = HAP5 subunit of HAP complex, PFAM = PF00808)' T '27.3.16' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP5' 'niben044scf00006176ctg010_1-1603' '(at5g43250 : 126.0) "nuclear factor Y, subunit C13" (NF-YC13); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C11 (TAIR:AT3G12480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative BnaC07g16980D, Description = BnaC07g16980D protein, PFAM = PF00808)' T '27.3.16' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP5' 'niben101scf00594_493281-498573' '(at1g08970 : 223.0) heme activated protein (HAP5c); "nuclear factor Y, subunit C9" (NF-YC9); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C3 (TAIR:AT1G54830.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36870 : 150.0) no description available & (gnl|cdd|34805 : 133.0) no description available & (reliability: 446.0) & (original description: Putative NTF, Description = Nuclear transcription factor Y subunit C-2, PFAM = PF00808)' T '27.3.16' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP5' 'niben101scf01111_547896-621386' '(at1g54830 : 115.0) "nuclear factor Y, subunit C3" (NF-YC3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C9 (TAIR:AT1G08970.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34805 : 112.0) no description available & (gnl|cdd|36870 : 106.0) no description available & (reliability: 230.0) & (original description: Putative Os04g0683400, Description = HAP5 subunit of HAP complex, PFAM = PF00808)' T '27.3.16' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP5' 'niben101scf01520_575572-578342' '(at1g08970 : 231.0) heme activated protein (HAP5c); "nuclear factor Y, subunit C9" (NF-YC9); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C3 (TAIR:AT1G54830.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36870 : 148.0) no description available & (gnl|cdd|34805 : 132.0) no description available & (reliability: 462.0) & (original description: Putative NFYC9, Description = Nuclear transcription factor Y subunit C-9, PFAM = PF00808)' T '27.3.16' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP5' 'niben101scf02155_277016-279733' '(at3g48590 : 270.0) Encodes a protein with similarity to a subunit of the CCAAT promoter motif binding complex of yeast.One of two members of this class (HAP5A) and expressed in vegetative and reproductive tissues.; "nuclear factor Y, subunit C1" (NF-YC1); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C4 (TAIR:AT5G63470.2); Has 1348 Blast hits to 1348 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 449; Fungi - 353; Plants - 430; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). & (gnl|cdd|36870 : 164.0) no description available & (gnl|cdd|34805 : 132.0) no description available & (reliability: 540.0) & (original description: Putative NFYC1, Description = Nuclear transcription factor Y subunit C-1, PFAM = PF00808)' T '27.3.16' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP5' 'niben101scf05621_238798-241211' '(at5g43250 : 126.0) "nuclear factor Y, subunit C13" (NF-YC13); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C11 (TAIR:AT3G12480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative BnaC07g16980D, Description = BnaC07g16980D protein, PFAM = PF00808)' T '27.3.16' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP5' 'niben101scf06394_542900-549109' '(at5g63470 : 105.0) "nuclear factor Y, subunit C4" (NF-YC4); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C1 (TAIR:AT3G48590.1); Has 1376 Blast hits to 1376 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 467; Fungi - 353; Plants - 441; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|34805 : 96.0) no description available & (gnl|cdd|36870 : 80.2) no description available & (reliability: 210.0) & (original description: Putative NFYC, Description = Nuclear transcription factor Y subunit C-4, PFAM = PF00808)' T '27.3.16' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP5' 'niben101scf10556_91633-101519' '(at3g12480 : 178.0) "nuclear factor Y, subunit C11" (NF-YC11); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G19490.1); Has 1099 Blast hits to 1099 proteins in 222 species: Archae - 0; Bacteria - 6; Metazoa - 308; Fungi - 314; Plants - 371; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink). & (gnl|cdd|36872 : 157.0) no description available & (gnl|cdd|34844 : 91.7) no description available & (reliability: 356.0) & (original description: Putative dpb3, Description = Dr1-associated corepressor, PFAM = PF00808)' T '27.3.16' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP5' 'niben101scf18002_3503-6246' '(at3g48590 : 268.0) Encodes a protein with similarity to a subunit of the CCAAT promoter motif binding complex of yeast.One of two members of this class (HAP5A) and expressed in vegetative and reproductive tissues.; "nuclear factor Y, subunit C1" (NF-YC1); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C4 (TAIR:AT5G63470.2); Has 1348 Blast hits to 1348 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 449; Fungi - 353; Plants - 430; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). & (gnl|cdd|36870 : 162.0) no description available & (gnl|cdd|34805 : 135.0) no description available & (reliability: 536.0) & (original description: Putative NFYC1, Description = Nuclear transcription factor Y subunit C-1, PFAM = PF00808)' T '27.3.16' 'RNA.regulation of transcription.CCAAT box binding factor family, HAP5' 'niben101scf21557_217208-219931' '(at3g48590 : 248.0) Encodes a protein with similarity to a subunit of the CCAAT promoter motif binding complex of yeast.One of two members of this class (HAP5A) and expressed in vegetative and reproductive tissues.; "nuclear factor Y, subunit C1" (NF-YC1); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C4 (TAIR:AT5G63470.2); Has 1348 Blast hits to 1348 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 449; Fungi - 353; Plants - 430; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). & (gnl|cdd|36870 : 164.0) no description available & (gnl|cdd|34805 : 132.0) no description available & (reliability: 496.0) & (original description: Putative NFYC1, Description = Nuclear transcription factor Y subunit C-1, PFAM = PF00808)' T '27.3.17' 'RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family' 'nbv0.3scaffold1524_46850-66768' '(at4g29000 : 293.0) Tesmin/TSO1-like CXC domain-containing protein; CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like, CXC (InterPro:IPR005172); BEST Arabidopsis thaliana protein match is: Tesmin/TSO1-like CXC domain-containing protein (TAIR:AT2G20110.1); Has 1016 Blast hits to 666 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 285; Fungi - 4; Plants - 322; Viruses - 0; Other Eukaryotes - 405 (source: NCBI BLink). & (gnl|cdd|36386 : 85.5) no description available & (reliability: 586.0) & (original description: Putative lin54, Description = AtTCX5, PFAM = PF03638)' T '27.3.17' 'RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family' 'niben044scf00013209ctg010_6640-16004' '(at4g29000 : 323.0) Tesmin/TSO1-like CXC domain-containing protein; CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like, CXC (InterPro:IPR005172); BEST Arabidopsis thaliana protein match is: Tesmin/TSO1-like CXC domain-containing protein (TAIR:AT2G20110.1); Has 1016 Blast hits to 666 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 285; Fungi - 4; Plants - 322; Viruses - 0; Other Eukaryotes - 405 (source: NCBI BLink). & (gnl|cdd|36386 : 89.0) no description available & (reliability: 646.0) & (original description: Putative lin54, Description = AtTCX5, PFAM = PF03638)' T '27.3.17' 'RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family' 'niben044scf00013209ctg012_1-4556' '(at2g20110 : 138.0) Tesmin/TSO1-like CXC domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like, CXC (InterPro:IPR005172); BEST Arabidopsis thaliana protein match is: Tesmin/TSO1-like CXC domain-containing protein (TAIR:AT4G29000.1); Has 1016 Blast hits to 700 proteins in 97 species: Archae - 0; Bacteria - 2; Metazoa - 306; Fungi - 3; Plants - 316; Viruses - 1; Other Eukaryotes - 388 (source: NCBI BLink). & (gnl|cdd|36386 : 106.0) no description available & (reliability: 276.0) & (original description: Putative MTL5, Description = AtTCX5, PFAM = PF03638)' T '27.3.17' 'RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family' 'niben044scf00041167ctg005_1457-4905' '(at4g14770 : 259.0) TESMIN/TSO1-like CXC 2 (TCX2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like, CXC (InterPro:IPR005172); BEST Arabidopsis thaliana protein match is: Tesmin/TSO1-like CXC domain-containing protein (TAIR:AT3G22780.1); Has 1250 Blast hits to 741 proteins in 97 species: Archae - 0; Bacteria - 6; Metazoa - 464; Fungi - 8; Plants - 353; Viruses - 0; Other Eukaryotes - 419 (source: NCBI BLink). & (gnl|cdd|36386 : 173.0) no description available & (reliability: 518.0) & (original description: Putative BnaA01g24520D, Description = BnaA01g24520D protein, PFAM = PF03638;PF03638)' T '27.3.17' 'RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family' 'niben101scf00349_369506-381994' '(at3g22780 : 177.0) putative DNA binding protein (tso1) mRNA, tso1-3 allele,; CHINESE FOR 'UGLY' (TSO1); CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like, CXC (InterPro:IPR005172); BEST Arabidopsis thaliana protein match is: TESMIN/TSO1-like CXC 2 (TAIR:AT4G14770.1); Has 1209 Blast hits to 687 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 404; Fungi - 6; Plants - 347; Viruses - 0; Other Eukaryotes - 452 (source: NCBI BLink). & (gnl|cdd|36386 : 164.0) no description available & (reliability: 354.0) & (original description: Putative lin54, Description = Protein lin-54 homolog, PFAM = PF03638;PF03638)' T '27.3.17' 'RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family' 'niben101scf03164_507099-531690' '(at4g29000 : 448.0) Tesmin/TSO1-like CXC domain-containing protein; CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like, CXC (InterPro:IPR005172); BEST Arabidopsis thaliana protein match is: Tesmin/TSO1-like CXC domain-containing protein (TAIR:AT2G20110.1); Has 1016 Blast hits to 666 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 285; Fungi - 4; Plants - 322; Viruses - 0; Other Eukaryotes - 405 (source: NCBI BLink). & (gnl|cdd|36386 : 193.0) no description available & (reliability: 896.0) & (original description: Putative TCX5, Description = Protein tesmin/TSO1-like CXC 5, PFAM = PF03638;PF03638)' T '27.3.17' 'RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family' 'niben101scf03164_508384-514529' '(at4g29000 : 333.0) Tesmin/TSO1-like CXC domain-containing protein; CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like, CXC (InterPro:IPR005172); BEST Arabidopsis thaliana protein match is: Tesmin/TSO1-like CXC domain-containing protein (TAIR:AT2G20110.1); Has 1016 Blast hits to 666 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 285; Fungi - 4; Plants - 322; Viruses - 0; Other Eukaryotes - 405 (source: NCBI BLink). & (gnl|cdd|36386 : 168.0) no description available & (reliability: 666.0) & (original description: Putative lin54, Description = Protein lin-54 homolog, PFAM = PF03638;PF03638)' T '27.3.17' 'RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family' 'niben101scf03469_108424-117722' '(at4g14770 : 361.0) TESMIN/TSO1-like CXC 2 (TCX2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like, CXC (InterPro:IPR005172); BEST Arabidopsis thaliana protein match is: Tesmin/TSO1-like CXC domain-containing protein (TAIR:AT3G22780.1); Has 1250 Blast hits to 741 proteins in 97 species: Archae - 0; Bacteria - 6; Metazoa - 464; Fungi - 8; Plants - 353; Viruses - 0; Other Eukaryotes - 419 (source: NCBI BLink). & (gnl|cdd|36386 : 216.0) no description available & (reliability: 722.0) & (original description: Putative TCX2, Description = Protein tesmin/TSO1-like CXC 2, PFAM = PF03638;PF03638)' T '27.3.17' 'RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family' 'niben101scf08617_67607-78060' '(at4g14770 : 176.0) TESMIN/TSO1-like CXC 2 (TCX2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like, CXC (InterPro:IPR005172); BEST Arabidopsis thaliana protein match is: Tesmin/TSO1-like CXC domain-containing protein (TAIR:AT3G22780.1); Has 1250 Blast hits to 741 proteins in 97 species: Archae - 0; Bacteria - 6; Metazoa - 464; Fungi - 8; Plants - 353; Viruses - 0; Other Eukaryotes - 419 (source: NCBI BLink). & (gnl|cdd|36386 : 163.0) no description available & (reliability: 352.0) & (original description: Putative lin54, Description = Abnormal cell lineage protein 54, PFAM = PF03638;PF03638)' T '27.3.17' 'RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family' 'niben101scf13098_81678-96599' '(at4g29000 : 465.0) Tesmin/TSO1-like CXC domain-containing protein; CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like, CXC (InterPro:IPR005172); BEST Arabidopsis thaliana protein match is: Tesmin/TSO1-like CXC domain-containing protein (TAIR:AT2G20110.1); Has 1016 Blast hits to 666 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 285; Fungi - 4; Plants - 322; Viruses - 0; Other Eukaryotes - 405 (source: NCBI BLink). & (gnl|cdd|36386 : 200.0) no description available & (reliability: 930.0) & (original description: Putative TCX5, Description = Protein tesmin/TSO1-like CXC 5, PFAM = PF03638;PF03638)' T '27.3.18' 'RNA.regulation of transcription.E2F/DP transcription factor family' 'nbv0.3scaffold14062_34438-41266' '(at5g22220 : 378.0) Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. Binds DPA and RBR1 proteins. Expressed throughout the cell cycle. Abundance increased by auxin through stabilization of the protein. Elevates CDK levels and activity, even under hormone-free conditions. Promotes cell division and shortens cell doubling time, inhibits cell growth. Transgenic plants overexpressing AtE2Fa contained an increased level of AtE2Fb transcripts that is paralleled by an increase in the amount of the AtE2Fb protein, suggesting that AtE2Fb expression might actually be up-regulated by the AtE2Fa transcription factor.; E2F transcription factor 1 (E2F1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: E2F transcription factor 3 (TAIR:AT2G36010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37788 : 241.0) no description available & (gnl|cdd|66044 : 107.0) no description available & (reliability: 756.0) & (original description: Putative E2FB, Description = Transcription factor E2FB, PFAM = PF16421;PF02319)' T '27.3.18' 'RNA.regulation of transcription.E2F/DP transcription factor family' 'nbv0.5scaffold2429_183180-189930' '(at5g22220 : 372.0) Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. Binds DPA and RBR1 proteins. Expressed throughout the cell cycle. Abundance increased by auxin through stabilization of the protein. Elevates CDK levels and activity, even under hormone-free conditions. Promotes cell division and shortens cell doubling time, inhibits cell growth. Transgenic plants overexpressing AtE2Fa contained an increased level of AtE2Fb transcripts that is paralleled by an increase in the amount of the AtE2Fb protein, suggesting that AtE2Fb expression might actually be up-regulated by the AtE2Fa transcription factor.; E2F transcription factor 1 (E2F1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: E2F transcription factor 3 (TAIR:AT2G36010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37788 : 249.0) no description available & (gnl|cdd|66044 : 107.0) no description available & (reliability: 744.0) & (original description: Putative E2FB, Description = Transcription factor E2FB, PFAM = PF16421;PF02319)' T '27.3.18' 'RNA.regulation of transcription.E2F/DP transcription factor family' 'niben101scf00801_403899-414121' '(at5g03415 : 340.0) Encodes a homolog of the animal DP protein. DP, in animals, forms a heterodimer with E2F and plays a central role in G1/S transition in the cell division cycle. DPB has been shown to interact with non phosphorylated E2Fc; when E2Fc is phosphorylated, the formation of the E2Fc/DPB heterodimer is lost.; DPB; CONTAINS InterPro DOMAIN/s: Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), Transcription factor DP, C-terminal (InterPro:IPR014889), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor DP (InterPro:IPR015648), Transcription factor DP, subgroup (InterPro:IPR016556); BEST Arabidopsis thaliana protein match is: Transcription factor DP (TAIR:AT5G02470.3). & (gnl|cdd|38040 : 275.0) no description available & (gnl|cdd|72205 : 157.0) no description available & (reliability: 680.0) & (original description: Putative dp, Description = DP protein, PFAM = PF08781;PF02319)' T '27.3.18' 'RNA.regulation of transcription.E2F/DP transcription factor family' 'niben101scf01359_291868-304807' '(at5g22220 : 181.0) Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. Binds DPA and RBR1 proteins. Expressed throughout the cell cycle. Abundance increased by auxin through stabilization of the protein. Elevates CDK levels and activity, even under hormone-free conditions. Promotes cell division and shortens cell doubling time, inhibits cell growth. Transgenic plants overexpressing AtE2Fa contained an increased level of AtE2Fb transcripts that is paralleled by an increase in the amount of the AtE2Fb protein, suggesting that AtE2Fb expression might actually be up-regulated by the AtE2Fa transcription factor.; E2F transcription factor 1 (E2F1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: E2F transcription factor 3 (TAIR:AT2G36010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37788 : 132.0) no description available & (gnl|cdd|66044 : 107.0) no description available & (reliability: 362.0) & (original description: Putative E2F4, Description = E2F4, PFAM = PF02319)' T '27.3.18' 'RNA.regulation of transcription.E2F/DP transcription factor family' 'niben101scf01372_129929-135689' '(at2g36010 : 415.0) Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway.; E2F transcription factor 3 (E2F3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: transcription factor complex, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: E2F transcription factor 1 (TAIR:AT5G22220.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37788 : 251.0) no description available & (gnl|cdd|66044 : 110.0) no description available & (reliability: 830.0) & (original description: Putative E2FA, Description = Transcription factor E2FA, PFAM = PF16421;PF02319)' T '27.3.18' 'RNA.regulation of transcription.E2F/DP transcription factor family' 'niben101scf01750_1607245-1614206' '(at5g22220 : 375.0) Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. Binds DPA and RBR1 proteins. Expressed throughout the cell cycle. Abundance increased by auxin through stabilization of the protein. Elevates CDK levels and activity, even under hormone-free conditions. Promotes cell division and shortens cell doubling time, inhibits cell growth. Transgenic plants overexpressing AtE2Fa contained an increased level of AtE2Fb transcripts that is paralleled by an increase in the amount of the AtE2Fb protein, suggesting that AtE2Fb expression might actually be up-regulated by the AtE2Fa transcription factor.; E2F transcription factor 1 (E2F1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: E2F transcription factor 3 (TAIR:AT2G36010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37788 : 245.0) no description available & (gnl|cdd|66044 : 107.0) no description available & (reliability: 750.0) & (original description: Putative E2FB, Description = Transcription factor E2FB, PFAM = PF02319;PF16421)' T '27.3.18' 'RNA.regulation of transcription.E2F/DP transcription factor family' 'niben101scf04654_468097-472863' '(at3g48160 : 323.0) E2F-like protein, an inhibitor of the endocycle, preserves the mitotic state of proliferating cells by suppressing transcription of genes that are required for cells to enter the DNA endoreduplication cycle.; DP-E2F-like 1 (DEL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: DP-E2F-like protein 3 (TAIR:AT3G01330.1); Has 1182 Blast hits to 869 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 722; Fungi - 9; Plants - 301; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|37789 : 298.0) no description available & (gnl|cdd|66044 : 87.9) no description available & (reliability: 646.0) & (original description: Putative E2FF, Description = E2F transcription factor-like E2FF, PFAM = PF02319;PF02319)' T '27.3.18' 'RNA.regulation of transcription.E2F/DP transcription factor family' 'niben101scf05411_235305-241058' '(at1g47870 : 238.0) Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. AtE2Fc is regulated by a balance between gene expression and ubiquitin-proteasome proteolysis. AtE2Fc might play a role in cell division and during the transition from skotomorphogenesis to photomorphogenesis. E2Fc has been shown to interact with DPB in its nonphosphorylated form; when E2Fc is phosphorylated, the formation of the E2Fc/DPB heterodimer is lost.; ATE2F2; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: E2F transcription factor 1 (TAIR:AT5G22220.3). & (gnl|cdd|37788 : 197.0) no description available & (gnl|cdd|66044 : 95.2) no description available & (reliability: 476.0) & (original description: Putative E2FC, Description = Transcription factor E2FC, PFAM = PF16421;PF02319)' T '27.3.18' 'RNA.regulation of transcription.E2F/DP transcription factor family' 'niben101scf06280_193535-200600' '(gnl|cdd|37789 : 281.0) no description available & (at3g48160 : 263.0) E2F-like protein, an inhibitor of the endocycle, preserves the mitotic state of proliferating cells by suppressing transcription of genes that are required for cells to enter the DNA endoreduplication cycle.; DP-E2F-like 1 (DEL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: DP-E2F-like protein 3 (TAIR:AT3G01330.1); Has 1182 Blast hits to 869 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 722; Fungi - 9; Plants - 301; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|66044 : 86.0) no description available & (reliability: 526.0) & (original description: Putative e2Ff, Description = Transcription factor E2F7, PFAM = PF02319;PF02319)' T '27.3.18' 'RNA.regulation of transcription.E2F/DP transcription factor family' 'niben101scf07162_343040-348037' '(at3g48160 : 268.0) E2F-like protein, an inhibitor of the endocycle, preserves the mitotic state of proliferating cells by suppressing transcription of genes that are required for cells to enter the DNA endoreduplication cycle.; DP-E2F-like 1 (DEL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: DP-E2F-like protein 3 (TAIR:AT3G01330.1); Has 1182 Blast hits to 869 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 722; Fungi - 9; Plants - 301; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|37789 : 239.0) no description available & (reliability: 536.0) & (original description: Putative e2Ff, Description = E2F transcription factor-like E2FE, PFAM = PF02319)' T '27.3.18' 'RNA.regulation of transcription.E2F/DP transcription factor family' 'niben101scf08034_40100-47403' '(at5g22220 : 393.0) Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. Binds DPA and RBR1 proteins. Expressed throughout the cell cycle. Abundance increased by auxin through stabilization of the protein. Elevates CDK levels and activity, even under hormone-free conditions. Promotes cell division and shortens cell doubling time, inhibits cell growth. Transgenic plants overexpressing AtE2Fa contained an increased level of AtE2Fb transcripts that is paralleled by an increase in the amount of the AtE2Fb protein, suggesting that AtE2Fb expression might actually be up-regulated by the AtE2Fa transcription factor.; E2F transcription factor 1 (E2F1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: E2F transcription factor 3 (TAIR:AT2G36010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37788 : 246.0) no description available & (gnl|cdd|66044 : 107.0) no description available & (reliability: 786.0) & (original description: Putative E2FB, Description = Transcription factor E2FB, PFAM = PF02319;PF16421)' T '27.3.18' 'RNA.regulation of transcription.E2F/DP transcription factor family' 'niben101scf10018_14587-21465' '(at5g22220 : 374.0) Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. Binds DPA and RBR1 proteins. Expressed throughout the cell cycle. Abundance increased by auxin through stabilization of the protein. Elevates CDK levels and activity, even under hormone-free conditions. Promotes cell division and shortens cell doubling time, inhibits cell growth. Transgenic plants overexpressing AtE2Fa contained an increased level of AtE2Fb transcripts that is paralleled by an increase in the amount of the AtE2Fb protein, suggesting that AtE2Fb expression might actually be up-regulated by the AtE2Fa transcription factor.; E2F transcription factor 1 (E2F1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: E2F transcription factor 3 (TAIR:AT2G36010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37788 : 244.0) no description available & (gnl|cdd|66044 : 106.0) no description available & (reliability: 748.0) & (original description: Putative E2F, Description = Transcription factor (E2F), PFAM = PF16421;PF02319)' T '27.3.19' 'RNA.regulation of transcription.EIN3-like(EIL) transcription factor family' 'nbv0.3scaffold38582_15686-19674' '(gnl|cdd|68447 : 488.0) no description available & (at1g73730 : 449.0) Encodes a putative transcription factor involved in ethylene signalling. Isolated DNA binding domain has been shown to bind DNA in vitro.; ETHYLENE-INSENSITIVE3-like 3 (EIL3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, cellular response to sulfate starvation, regulation of sulfur metabolic process, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: Ethylene insensitive 3 family protein (TAIR:AT3G20770.1); Has 298 Blast hits to 298 proteins in 81 species: Archae - 0; Bacteria - 53; Metazoa - 2; Fungi - 1; Plants - 234; Viruses - 4; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 898.0) & (original description: Putative einl1, Description = Ethylene insensitive (EIN3/EIL)-like transcription regulator, PFAM = PF04873)' T '27.3.19' 'RNA.regulation of transcription.EIN3-like(EIL) transcription factor family' 'nbv0.5scaffold581_99659-103176' '(gnl|cdd|68447 : 395.0) no description available & (at5g65100 : 332.0) Ethylene insensitive 3 family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: Ethylene insensitive 3 family protein (TAIR:AT5G10120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 664.0) & (original description: Putative EIL4, Description = Putative ETHYLENE INSENSITIVE 3-like 4 protein, PFAM = PF04873)' T '27.3.19' 'RNA.regulation of transcription.EIN3-like(EIL) transcription factor family' 'niben044scf00010278ctg016_1-3951' '(at3g20770 : 628.0) Encodes EIN3 (ethylene-insensitive3), a nuclear transcription factor that initiates downstream transcriptional cascades for ethylene responses.; ETHYLENE-INSENSITIVE3 (EIN3); CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: ETHYLENE-INSENSITIVE3-like 1 (TAIR:AT2G27050.1); Has 12681 Blast hits to 4386 proteins in 108 species: Archae - 12; Bacteria - 9; Metazoa - 78; Fungi - 631; Plants - 331; Viruses - 0; Other Eukaryotes - 11620 (source: NCBI BLink). & (gnl|cdd|68447 : 534.0) no description available & (reliability: 1256.0) & (original description: Putative EIN3, Description = Transcription factor, PFAM = PF04873)' T '27.3.19' 'RNA.regulation of transcription.EIN3-like(EIL) transcription factor family' 'niben044scf00010278ctg021_5008-8952' '(at3g20770 : 607.0) Encodes EIN3 (ethylene-insensitive3), a nuclear transcription factor that initiates downstream transcriptional cascades for ethylene responses.; ETHYLENE-INSENSITIVE3 (EIN3); CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: ETHYLENE-INSENSITIVE3-like 1 (TAIR:AT2G27050.1); Has 12681 Blast hits to 4386 proteins in 108 species: Archae - 12; Bacteria - 9; Metazoa - 78; Fungi - 631; Plants - 331; Viruses - 0; Other Eukaryotes - 11620 (source: NCBI BLink). & (gnl|cdd|68447 : 547.0) no description available & (reliability: 1214.0) & (original description: Putative in3, Description = EIN3-like protein, PFAM = PF04873)' T '27.3.19' 'RNA.regulation of transcription.EIN3-like(EIL) transcription factor family' 'niben101scf00304_118862-122706' '(at3g20770 : 615.0) Encodes EIN3 (ethylene-insensitive3), a nuclear transcription factor that initiates downstream transcriptional cascades for ethylene responses.; ETHYLENE-INSENSITIVE3 (EIN3); CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: ETHYLENE-INSENSITIVE3-like 1 (TAIR:AT2G27050.1); Has 12681 Blast hits to 4386 proteins in 108 species: Archae - 12; Bacteria - 9; Metazoa - 78; Fungi - 631; Plants - 331; Viruses - 0; Other Eukaryotes - 11620 (source: NCBI BLink). & (gnl|cdd|68447 : 516.0) no description available & (reliability: 1230.0) & (original description: Putative LeEIL4, Description = EIN3-like protein, PFAM = PF04873)' T '27.3.19' 'RNA.regulation of transcription.EIN3-like(EIL) transcription factor family' 'niben101scf00304_196714-200501' '(at3g20770 : 656.0) Encodes EIN3 (ethylene-insensitive3), a nuclear transcription factor that initiates downstream transcriptional cascades for ethylene responses.; ETHYLENE-INSENSITIVE3 (EIN3); CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: ETHYLENE-INSENSITIVE3-like 1 (TAIR:AT2G27050.1); Has 12681 Blast hits to 4386 proteins in 108 species: Archae - 12; Bacteria - 9; Metazoa - 78; Fungi - 631; Plants - 331; Viruses - 0; Other Eukaryotes - 11620 (source: NCBI BLink). & (gnl|cdd|68447 : 542.0) no description available & (reliability: 1312.0) & (original description: Putative EIN3, Description = Protein ETHYLENE INSENSITIVE 3, PFAM = PF04873)' T '27.3.19' 'RNA.regulation of transcription.EIN3-like(EIL) transcription factor family' 'niben101scf02688_62818-67549' '(gnl|cdd|68447 : 464.0) no description available & (at1g73730 : 423.0) Encodes a putative transcription factor involved in ethylene signalling. Isolated DNA binding domain has been shown to bind DNA in vitro.; ETHYLENE-INSENSITIVE3-like 3 (EIL3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, cellular response to sulfate starvation, regulation of sulfur metabolic process, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: Ethylene insensitive 3 family protein (TAIR:AT3G20770.1); Has 298 Blast hits to 298 proteins in 81 species: Archae - 0; Bacteria - 53; Metazoa - 2; Fungi - 1; Plants - 234; Viruses - 4; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 846.0) & (original description: Putative einl1, Description = Ethylene insensitive (EIN3/EIL)-like transcription regulator, PFAM = PF04873)' T '27.3.19' 'RNA.regulation of transcription.EIN3-like(EIL) transcription factor family' 'niben101scf03510_140469-143986' '(gnl|cdd|68447 : 395.0) no description available & (at5g65100 : 338.0) Ethylene insensitive 3 family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: Ethylene insensitive 3 family protein (TAIR:AT5G10120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 676.0) & (original description: Putative EIL4, Description = Putative ETHYLENE INSENSITIVE 3-like 4 protein, PFAM = PF04873)' T '27.3.19' 'RNA.regulation of transcription.EIN3-like(EIL) transcription factor family' 'niben101scf05588_1000693-1004522' '(at3g20770 : 623.0) Encodes EIN3 (ethylene-insensitive3), a nuclear transcription factor that initiates downstream transcriptional cascades for ethylene responses.; ETHYLENE-INSENSITIVE3 (EIN3); CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: ETHYLENE-INSENSITIVE3-like 1 (TAIR:AT2G27050.1); Has 12681 Blast hits to 4386 proteins in 108 species: Archae - 12; Bacteria - 9; Metazoa - 78; Fungi - 631; Plants - 331; Viruses - 0; Other Eukaryotes - 11620 (source: NCBI BLink). & (gnl|cdd|68447 : 534.0) no description available & (reliability: 1246.0) & (original description: Putative EIN3, Description = Protein ETHYLENE INSENSITIVE 3, PFAM = PF04873)' T '27.3.19' 'RNA.regulation of transcription.EIN3-like(EIL) transcription factor family' 'niben101scf17776_48815-52635' '(gnl|cdd|68447 : 535.0) no description available & (at3g20770 : 530.0) Encodes EIN3 (ethylene-insensitive3), a nuclear transcription factor that initiates downstream transcriptional cascades for ethylene responses.; ETHYLENE-INSENSITIVE3 (EIN3); CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: ETHYLENE-INSENSITIVE3-like 1 (TAIR:AT2G27050.1); Has 12681 Blast hits to 4386 proteins in 108 species: Archae - 12; Bacteria - 9; Metazoa - 78; Fungi - 631; Plants - 331; Viruses - 0; Other Eukaryotes - 11620 (source: NCBI BLink). & (reliability: 1060.0) & (original description: Putative EIL3, Description = EIL3, PFAM = PF04873)' T '27.3.19' 'RNA.regulation of transcription.EIN3-like(EIL) transcription factor family' 'niben101scf26023_14586-18040' '(at3g20770 : 668.0) Encodes EIN3 (ethylene-insensitive3), a nuclear transcription factor that initiates downstream transcriptional cascades for ethylene responses.; ETHYLENE-INSENSITIVE3 (EIN3); CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: ETHYLENE-INSENSITIVE3-like 1 (TAIR:AT2G27050.1); Has 12681 Blast hits to 4386 proteins in 108 species: Archae - 12; Bacteria - 9; Metazoa - 78; Fungi - 631; Plants - 331; Viruses - 0; Other Eukaryotes - 11620 (source: NCBI BLink). & (gnl|cdd|68447 : 561.0) no description available & (reliability: 1336.0) & (original description: Putative EIN3, Description = Protein ETHYLENE INSENSITIVE 3, PFAM = PF04873)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold2084_18126-24839' '(at1g32240 : 237.0) Encodes a member of the KANADI family of putative transcription factors. Together with KAN1, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN1 and KAN4 appears to regulate the proper localization of PIN1 in early embryogenesis.; KANADI 2 (KAN2); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G17695.1); Has 1778 Blast hits to 1772 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 21; Plants - 1618; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 474.0) & (original description: Putative KAN2, Description = Probable transcription factor KAN2, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold7775_13552-20265' '(at2g20570 : 209.0) Encodes GLK1, Golden2-like 1, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK2, Golden2-like 2, is encoded by At5g44190. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.; GBF's pro-rich region-interacting factor 1 (GPRI1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GOLDEN2-like 2 (TAIR:AT5G44190.1). & (reliability: 418.0) & (original description: Putative GLK2, Description = Transcription activator GLK2, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold9633_43076-50330' '(at3g24120 : 311.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G13640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 622.0) & (original description: Putative myb6, Description = Putative MYB transcription factor, PFAM = PF14379;PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold10244_5189-8133' '(at3g46640 : 226.0) Encodes a myb family transcription factor with a single Myb DNA-binding domain (type SHAQKYF) that is unique to plants and is essential for circadian rhythms, specifically for transcriptional regulation within the circadian clock. LUX is required for normal rhythmic expression of multiple clock outputs in both constant light and darkness. It is coregulated with TOC1 and seems to be repressed by CCA1 and LHY by direct binding of these proteins to the evening element in the LUX promoter.; PHYTOCLOCK 1 (PCL1); CONTAINS InterPro DOMAIN/s: Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G59570.1). & (reliability: 452.0) & (original description: Putative myb, Description = MYB1, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold15145_13739-16638' '(at3g10760 : 202.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G05090.1); Has 1702 Blast hits to 1694 proteins in 80 species: Archae - 0; Bacteria - 3; Metazoa - 31; Fungi - 6; Plants - 1631; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative MYBC1, Description = Myb family transcription factor, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold17163_17054-21502' '(at2g02060 : 113.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G14600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative BnaA02g21100D, Description = BnaA02g21100D protein, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold18054_1918-5562' '(at2g38300 : 139.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G40260.1); Has 1661 Blast hits to 1657 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 4; Plants - 1609; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative kan1-like, Description = Putative transcription repressor KAN1-like, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold18801_1-5735' '(at5g42630 : 182.0) Encodes a member of the KANADI family of putative transcription factors. Involved in integument formation during ovule development and expressed at the boundary between the inner and outer integuments. It is essential for directing laminar growth of the inner integument.Along with KAN1 and KAN2, KAN4 is involved in proper localization of PIN1 in early embryogenesis.; ABERRANT TESTA SHAPE (ATS); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G32240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative KAN4, Description = Probable transcription factor KAN4, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold19841_1-5043' '(at5g42630 : 173.0) Encodes a member of the KANADI family of putative transcription factors. Involved in integument formation during ovule development and expressed at the boundary between the inner and outer integuments. It is essential for directing laminar growth of the inner integument.Along with KAN1 and KAN2, KAN4 is involved in proper localization of PIN1 in early embryogenesis.; ABERRANT TESTA SHAPE (ATS); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G32240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative kan1, Description = Putative Myb family transcription factor At1g14600 family, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold25829_309-6767' '(at2g02060 : 117.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G14600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative MYBR14, Description = MYBR domain class transcription factor, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold26427_10142-16987' '(at4g13640 : 201.0) unfertilized embryo sac 16 (UNE16); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24120.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative APL, Description = Myb family transcription factor APL, PFAM = PF14379;PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold27222_23160-27138' '(at1g68670 : 230.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT1G25550.1); Has 1631 Blast hits to 1627 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 1600; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative myb5, Description = Myb transcription factor, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold27256_6185-12644' '(at2g20570 : 227.0) Encodes GLK1, Golden2-like 1, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK2, Golden2-like 2, is encoded by At5g44190. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.; GBF's pro-rich region-interacting factor 1 (GPRI1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GOLDEN2-like 2 (TAIR:AT5G44190.1). & (reliability: 454.0) & (original description: Putative GLK1, Description = Transcription activator GLK1, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold37417_8363-16881' '(at5g45580 : 136.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24120.1); Has 1663 Blast hits to 1654 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1644; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative myb6, Description = Myb family transcription factor APL, PFAM = PF14379)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold56156_9255-13077' '(at5g06800 : 202.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G01060.1). & (reliability: 404.0) & (original description: Putative myb1, Description = Myb family transcription factor APL, PFAM = PF14379;PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold60450_1545-11015' '(at5g16560 : 188.0) Encodes a KANADI protein (KAN) that regulates organ polarity in Arabidopsis. KAN is required for abaxial identity in both leaves and carpels, and encodes a nuclear-localized protein in the GARP family of putative transcription factors. Together with KAN2, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN2 and KAN4, KAN1 appears to be required for proper regulation of PIN1 in early embryogenesis.; KANADI (KAN); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G32240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative KAN1, Description = Transcription repressor KAN1, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold60460_1411-5048' '(at2g38300 : 158.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G40260.1); Has 1661 Blast hits to 1657 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 4; Plants - 1609; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative glysoja_042050, Description = Putative Myb family transcription factor, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold61643_5223-11331' '(at2g42660 : 94.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G38300.1); Has 1621 Blast hits to 1617 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1607; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative MYBR14, Description = Putative Myb family transcription factor, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold64234_1-7746' '(at1g32240 : 174.0) Encodes a member of the KANADI family of putative transcription factors. Together with KAN1, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN1 and KAN4 appears to regulate the proper localization of PIN1 in early embryogenesis.; KANADI 2 (KAN2); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G17695.1); Has 1778 Blast hits to 1772 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 21; Plants - 1618; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative kan1, Description = Putative Myb family transcription factor At1g14600 family, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold72021_4847-8841' '(at5g45580 : 177.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24120.1); Has 1663 Blast hits to 1654 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1644; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative PHL11, Description = Myb family transcription factor PHL11, PFAM = PF14379;PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.3scaffold81802_1-4124' '(at5g06800 : 202.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G01060.1). & (reliability: 404.0) & (original description: Putative csp1, Description = Myb family transcription factor APL, PFAM = PF14379;PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.5scaffold865_395027-397959' '(at3g46640 : 183.0) Encodes a myb family transcription factor with a single Myb DNA-binding domain (type SHAQKYF) that is unique to plants and is essential for circadian rhythms, specifically for transcriptional regulation within the circadian clock. LUX is required for normal rhythmic expression of multiple clock outputs in both constant light and darkness. It is coregulated with TOC1 and seems to be repressed by CCA1 and LHY by direct binding of these proteins to the evening element in the LUX promoter.; PHYTOCLOCK 1 (PCL1); CONTAINS InterPro DOMAIN/s: Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G59570.1). & (reliability: 366.0) & (original description: Putative PCL1, Description = Transcription factor PCL1, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.5scaffold1204_412851-415795' '(at3g46640 : 200.0) Encodes a myb family transcription factor with a single Myb DNA-binding domain (type SHAQKYF) that is unique to plants and is essential for circadian rhythms, specifically for transcriptional regulation within the circadian clock. LUX is required for normal rhythmic expression of multiple clock outputs in both constant light and darkness. It is coregulated with TOC1 and seems to be repressed by CCA1 and LHY by direct binding of these proteins to the evening element in the LUX promoter.; PHYTOCLOCK 1 (PCL1); CONTAINS InterPro DOMAIN/s: Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G59570.1). & (reliability: 400.0) & (original description: Putative PCL1, Description = Protein phytoclock 1, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.5scaffold1816_92141-97739' '(at2g40260 : 104.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G38300.1); Has 1902 Blast hits to 1885 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 17; Plants - 1623; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative PGSC0003DMG400029440, Description = Putative Myb family transcription factor, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.5scaffold1894_261900-267227' '(at2g38300 : 116.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G40260.1); Has 1661 Blast hits to 1657 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 4; Plants - 1609; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative BnaCnng71310D, Description = BnaCnng71310D protein, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.5scaffold2758_268308-281306' '(at5g06800 : 117.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G01060.1). & (reliability: 234.0) & (original description: Putative PHL5, Description = Myb family transcription factor APL, PFAM = PF14379)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.5scaffold3873_107149-113842' '(at2g01060 : 297.0) myb-like HTH transcriptional regulator family protein; BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT3G13040.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 594.0) & (original description: Putative myb6, Description = Putative MYB transcription factor, PFAM = PF00249;PF14379)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.5scaffold6948_72412-76503' '(at1g69580 : 168.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04030.3); Has 1687 Blast hits to 1671 proteins in 68 species: Archae - 0; Bacteria - 6; Metazoa - 4; Fungi - 0; Plants - 1652; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative MYB36, Description = MYB-related protein, PFAM = PF14379)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'nbv0.5scaffold7918_3413-6315' '(at3g10760 : 202.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G05090.1); Has 1702 Blast hits to 1694 proteins in 80 species: Archae - 0; Bacteria - 3; Metazoa - 31; Fungi - 6; Plants - 1631; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative MYBC1, Description = Myb family transcription factor, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00006363ctg003_13907-20951' '(at1g32240 : 166.0) Encodes a member of the KANADI family of putative transcription factors. Together with KAN1, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN1 and KAN4 appears to regulate the proper localization of PIN1 in early embryogenesis.; KANADI 2 (KAN2); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G17695.1); Has 1778 Blast hits to 1772 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 21; Plants - 1618; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative KAN2, Description = Probable transcription factor KAN2, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00007844ctg009_1-2598' '(at5g44190 : 135.0) Encodes GLK2, Golden2-like 2, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK1, Golden2-like 1, is encoded by At2g20570. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.; GOLDEN2-like 2 (GLK2); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GBF's pro-rich region-interacting factor 1 (TAIR:AT2G20570.1); Has 1672 Blast hits to 1670 proteins in 70 species: Archae - 0; Bacteria - 6; Metazoa - 7; Fungi - 2; Plants - 1623; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative glk1, Description = Two-component response regulator-like APRR2, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00008341ctg005_1358-8673' '(at3g24120 : 286.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G13640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 572.0) & (original description: Putative myb6, Description = Myb family transcription factor APL, PFAM = PF14379)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00010858ctg000_4000-9055' '(at5g45580 : 178.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24120.1); Has 1663 Blast hits to 1654 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1644; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative PHL11, Description = Myb family transcription factor PHL11, PFAM = PF14379;PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00013875ctg011_2705-8304' '(at2g40260 : 103.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G38300.1); Has 1902 Blast hits to 1885 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 17; Plants - 1623; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative BnaCnng71310D, Description = BnaCnng71310D protein, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00013891ctg002_5622-12090' '(at2g20570 : 224.0) Encodes GLK1, Golden2-like 1, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK2, Golden2-like 2, is encoded by At5g44190. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.; GBF's pro-rich region-interacting factor 1 (GPRI1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GOLDEN2-like 2 (TAIR:AT5G44190.1). & (reliability: 448.0) & (original description: Putative GLK1, Description = Transcription activator GLK1, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00017924ctg001_6118-9158' '(at4g13640 : 117.0) unfertilized embryo sac 16 (UNE16); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24120.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative APL, Description = Myb family transcription factor APL, PFAM = PF14379)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00024833ctg020_9073-13419' '(at1g69580 : 215.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04030.3); Has 1687 Blast hits to 1671 proteins in 68 species: Archae - 0; Bacteria - 6; Metazoa - 4; Fungi - 0; Plants - 1652; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 430.0) & (original description: Putative myb6, Description = Myb family transcription factor APL, PFAM = PF00249;PF14379)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00025662ctg005_3634-11481' '(at4g13640 : 276.0) unfertilized embryo sac 16 (UNE16); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24120.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 552.0) & (original description: Putative myb6, Description = Putative MYB transcription factor, PFAM = PF14379;PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00026094ctg008_2382-6799' '(at5g29000 : 161.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative BnaC08g13160D, Description = BnaC08g13160D protein, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00026094ctg009_1-2331' '(at4g28610 : 87.4) Similar to phosphate starvation response gene from Chlamydomonas. Weakly responsive to phosphate starvation. Acts upstream of PHO2 in phosphate signaling.; phosphate starvation response 1 (PHR1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G20400.1); Has 1692 Blast hits to 1675 proteins in 68 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 2; Plants - 1663; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative csp1, Description = Myb family transcription factor APL, PFAM = PF14379)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00029032ctg001_13791-17961' '(at1g69580 : 225.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04030.3); Has 1687 Blast hits to 1671 proteins in 68 species: Archae - 0; Bacteria - 6; Metazoa - 4; Fungi - 0; Plants - 1652; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 450.0) & (original description: Putative PHL8, Description = Myb family transcription factor PHL8, PFAM = PF00249;PF14379)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00042927ctg000_1767-10247' '(at1g32240 : 172.0) Encodes a member of the KANADI family of putative transcription factors. Together with KAN1, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN1 and KAN4 appears to regulate the proper localization of PIN1 in early embryogenesis.; KANADI 2 (KAN2); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G17695.1); Has 1778 Blast hits to 1772 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 21; Plants - 1618; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative kan1, Description = Putative Myb family transcription factor At1g14600 family, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00057462ctg000_1898-6234' '(at5g06800 : 201.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G01060.1). & (reliability: 402.0) & (original description: Putative csp1, Description = Myb family transcription factor APL, PFAM = PF00249;PF14379)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben044scf00060696ctg000_4725-8816' '(at1g69580 : 168.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04030.3); Has 1687 Blast hits to 1671 proteins in 68 species: Archae - 0; Bacteria - 6; Metazoa - 4; Fungi - 0; Plants - 1652; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative myb6, Description = Myb family transcription factor APL, PFAM = PF14379)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf00096_63980-67866' '(at5g06800 : 149.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G01060.1). & (reliability: 298.0) & (original description: Putative csp1, Description = Myb family transcription factor APL, PFAM = PF14379;PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf00138_609515-614792' '(at1g79430 : 337.0) Encodes gene product that is required for several aspects of phloem development in the root: (1) the specific divisions organizing the phloem pole, (2) sieve element differentiation and (3) the expression of a companion-specific gene. Mutant has a defect in the organization of phloem poles in the root. apl seedlings have a short, determinate root with only occasional lateral branches.; ALTERED PHLOEM DEVELOPMENT (APL); CONTAINS InterPro DOMAIN/s: Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G12730.1); Has 1662 Blast hits to 1649 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1644; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 674.0) & (original description: Putative APL, Description = Myb family transcription factor APL, PFAM = PF14379;PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf00340_322954-327859' '(at5g06800 : 187.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G01060.1). & (reliability: 374.0) & (original description: Putative csp1, Description = Myb family transcription factor APL, PFAM = PF14379;PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf00343_759671-764290' '(at2g01060 : 243.0) myb-like HTH transcriptional regulator family protein; BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT3G13040.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative myb6, Description = Putative MYB transcription factor, PFAM = PF14379;PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf00872_131154-136019' '(at1g68670 : 229.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT1G25550.1); Has 1631 Blast hits to 1627 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 1600; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative myb5, Description = Myb transcription factor, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf01240_1176701-1180400' '(at2g03500 : 226.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT1G68670.1); Has 20396 Blast hits to 7290 proteins in 193 species: Archae - 14; Bacteria - 20; Metazoa - 401; Fungi - 967; Plants - 1637; Viruses - 8; Other Eukaryotes - 17349 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative EFM, Description = Two-component response regulator ARR18, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf01482_176045-178977' '(at3g46640 : 182.0) Encodes a myb family transcription factor with a single Myb DNA-binding domain (type SHAQKYF) that is unique to plants and is essential for circadian rhythms, specifically for transcriptional regulation within the circadian clock. LUX is required for normal rhythmic expression of multiple clock outputs in both constant light and darkness. It is coregulated with TOC1 and seems to be repressed by CCA1 and LHY by direct binding of these proteins to the evening element in the LUX promoter.; PHYTOCLOCK 1 (PCL1); CONTAINS InterPro DOMAIN/s: Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G59570.1). & (reliability: 364.0) & (original description: Putative PCL1, Description = Transcription factor PCL1, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf01999_364066-366965' '(at3g10760 : 198.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G05090.1); Has 1702 Blast hits to 1694 proteins in 80 species: Archae - 0; Bacteria - 3; Metazoa - 31; Fungi - 6; Plants - 1631; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative MYBC1, Description = Myb family transcription factor, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf02039_440487-447736' '(at5g29000 : 216.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative PHL1, Description = Protein PHR1-LIKE 1, PFAM = PF00249;PF14379)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf02145_986299-990290' '(at2g02060 : 114.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G14600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative BnaCnng71310D, Description = BnaCnng71310D protein, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf02145_986425-990747' '(at2g02060 : 96.3) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G14600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative kan1-like, Description = Putative transcription repressor KAN1-like, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf02358_145056-156087' '(at4g13640 : 204.0) unfertilized embryo sac 16 (UNE16); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24120.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative myb6, Description = Putative MYB transcription factor, PFAM = PF00249;PF14379)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf02911_176754-186164' '(at5g16560 : 176.0) Encodes a KANADI protein (KAN) that regulates organ polarity in Arabidopsis. KAN is required for abaxial identity in both leaves and carpels, and encodes a nuclear-localized protein in the GARP family of putative transcription factors. Together with KAN2, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN2 and KAN4, KAN1 appears to be required for proper regulation of PIN1 in early embryogenesis.; KANADI (KAN); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G32240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative KAN1, Description = Transcription repressor KAN1, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf03080_160218-164568' '(at2g03500 : 162.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT1G68670.1); Has 20396 Blast hits to 7290 proteins in 193 species: Archae - 14; Bacteria - 20; Metazoa - 401; Fungi - 967; Plants - 1637; Viruses - 8; Other Eukaryotes - 17349 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative GLK44, Description = Two-component response regulator ARR1, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf03150_349470-354072' '(at1g68670 : 216.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT1G25550.1); Has 1631 Blast hits to 1627 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 1600; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative myb5, Description = Myb transcription factor, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf03202_1099724-1103586' '(at2g38300 : 174.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G40260.1); Has 1661 Blast hits to 1657 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 4; Plants - 1609; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative AT2G02060, Description = Putative Myb family transcription factor, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf03300_284946-289263' '(at2g03500 : 166.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT1G68670.1); Has 20396 Blast hits to 7290 proteins in 193 species: Archae - 14; Bacteria - 20; Metazoa - 401; Fungi - 967; Plants - 1637; Viruses - 8; Other Eukaryotes - 17349 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative EFM, Description = Two-component response regulator ARR1, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf03370_579526-582437' '(at3g10760 : 227.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G05090.1); Has 1702 Blast hits to 1694 proteins in 80 species: Archae - 0; Bacteria - 3; Metazoa - 31; Fungi - 6; Plants - 1631; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative MYBC1, Description = Myb family transcription factor, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf03488_851117-858727' '(at4g13640 : 263.0) unfertilized embryo sac 16 (UNE16); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24120.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative myb6, Description = Putative MYB transcription factor, PFAM = PF14379;PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf03863_158364-173405' '(at5g06800 : 201.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G01060.1). & (reliability: 402.0) & (original description: Putative myb1, Description = Myb family transcription factor APL, PFAM = PF14379;PF14379;PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf03934_15033-22419' '(at4g28610 : 227.0) Similar to phosphate starvation response gene from Chlamydomonas. Weakly responsive to phosphate starvation. Acts upstream of PHO2 in phosphate signaling.; phosphate starvation response 1 (PHR1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G20400.1); Has 1692 Blast hits to 1675 proteins in 68 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 2; Plants - 1663; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative PHR1, Description = Protein PHOSPHATE STARVATION RESPONSE 1, PFAM = PF14379;PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf04082_364122-368179' '(at1g69580 : 229.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04030.3); Has 1687 Blast hits to 1671 proteins in 68 species: Archae - 0; Bacteria - 6; Metazoa - 4; Fungi - 0; Plants - 1652; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative PHL8, Description = Myb family transcription factor PHL8, PFAM = PF00249;PF14379)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf04632_51951-56676' '(at3g04030 : 328.0) Homeodomain-like superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-related protein 1 (TAIR:AT5G18240.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative MYR2, Description = Myb-related protein 2, PFAM = PF14379;PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf04722_190325-194676' '(at2g01060 : 144.0) myb-like HTH transcriptional regulator family protein; BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT3G13040.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative myb, Description = Myb family transcription factor APL, PFAM = PF14379;PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf04740_166574-181666' '(at5g06800 : 108.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G01060.1). & (reliability: 216.0) & (original description: Putative myb, Description = Myb family transcription factor APL, PFAM = )' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf05278_122034-124978' '(at3g46640 : 224.0) Encodes a myb family transcription factor with a single Myb DNA-binding domain (type SHAQKYF) that is unique to plants and is essential for circadian rhythms, specifically for transcriptional regulation within the circadian clock. LUX is required for normal rhythmic expression of multiple clock outputs in both constant light and darkness. It is coregulated with TOC1 and seems to be repressed by CCA1 and LHY by direct binding of these proteins to the evening element in the LUX promoter.; PHYTOCLOCK 1 (PCL1); CONTAINS InterPro DOMAIN/s: Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G59570.1). & (reliability: 448.0) & (original description: Putative myb, Description = MYB1, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf05295_175352-180292' '(at1g79430 : 315.0) Encodes gene product that is required for several aspects of phloem development in the root: (1) the specific divisions organizing the phloem pole, (2) sieve element differentiation and (3) the expression of a companion-specific gene. Mutant has a defect in the organization of phloem poles in the root. apl seedlings have a short, determinate root with only occasional lateral branches.; ALTERED PHLOEM DEVELOPMENT (APL); CONTAINS InterPro DOMAIN/s: Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G12730.1); Has 1662 Blast hits to 1649 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1644; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 630.0) & (original description: Putative APL, Description = Myb family transcription factor APL, PFAM = PF00249;PF14379)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf05368_566409-570046' '(at2g38300 : 159.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G40260.1); Has 1661 Blast hits to 1657 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 4; Plants - 1609; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative BnaCnng71310D, Description = BnaCnng71310D protein, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf05516_61187-77696' '(at4g28610 : 220.0) Similar to phosphate starvation response gene from Chlamydomonas. Weakly responsive to phosphate starvation. Acts upstream of PHO2 in phosphate signaling.; phosphate starvation response 1 (PHR1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G20400.1); Has 1692 Blast hits to 1675 proteins in 68 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 2; Plants - 1663; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative PHL1, Description = Protein PHR1-LIKE 1, PFAM = PF00249;PF14379)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf05911_166022-171507' '(at2g42660 : 89.4) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G38300.1); Has 1621 Blast hits to 1617 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1607; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative PGSC0003DMG400028830, Description = Putative Myb family transcription factor, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf06065_29593-33942' '(at2g38300 : 139.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G40260.1); Has 1661 Blast hits to 1657 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 4; Plants - 1609; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative MYBR14, Description = Putative Myb family transcription factor, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf06155_38910-45775' '(at4g28610 : 228.0) Similar to phosphate starvation response gene from Chlamydomonas. Weakly responsive to phosphate starvation. Acts upstream of PHO2 in phosphate signaling.; phosphate starvation response 1 (PHR1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G20400.1); Has 1692 Blast hits to 1675 proteins in 68 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 2; Plants - 1663; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative csp1, Description = CDPK substrate protein 1, PFAM = PF14379;PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf06318_202199-206145' '(at2g38300 : 169.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G40260.1); Has 1661 Blast hits to 1657 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 4; Plants - 1609; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative glysoja_042050, Description = Putative Myb family transcription factor, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf06688_178049-186787' '(at5g29000 : 219.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative csp1, Description = Myb family transcription factor APL, PFAM = PF00249;PF14379)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf06721_47618-54189' '(at2g20570 : 237.0) Encodes GLK1, Golden2-like 1, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK2, Golden2-like 2, is encoded by At5g44190. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.; GBF's pro-rich region-interacting factor 1 (GPRI1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GOLDEN2-like 2 (TAIR:AT5G44190.1). & (reliability: 474.0) & (original description: Putative GLK1, Description = Transcription activator GLK1, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf06867_537027-540939' '(at4g37180 : 167.0) myb family transcription factor, contains Pfam domain, PF00249: Myb-like DNA-binding domain l; also isolated as a putative cytoskeletal protein in a yeast screen; Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G03500.1); Has 1651 Blast hits to 1647 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi - 0; Plants - 1596; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative Sb02g001600, Description = Putative uncharacterized protein Sb02g001600, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf07645_417444-421669' '(at3g04030 : 333.0) Homeodomain-like superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-related protein 1 (TAIR:AT5G18240.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 666.0) & (original description: Putative scMYB55, Description = ScMYB55 protein, PFAM = PF00249;PF14379)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf07841_23675-33049' '(at5g16560 : 187.0) Encodes a KANADI protein (KAN) that regulates organ polarity in Arabidopsis. KAN is required for abaxial identity in both leaves and carpels, and encodes a nuclear-localized protein in the GARP family of putative transcription factors. Together with KAN2, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN2 and KAN4, KAN1 appears to be required for proper regulation of PIN1 in early embryogenesis.; KANADI (KAN); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G32240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative KAN1, Description = Transcription repressor KAN1, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf07894_178645-201792' '(at2g38300 : 120.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G40260.1); Has 1661 Blast hits to 1657 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 4; Plants - 1609; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative BnaCnng71310D, Description = BnaCnng71310D protein, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf08041_96391-99419' '(at3g46640 : 220.0) Encodes a myb family transcription factor with a single Myb DNA-binding domain (type SHAQKYF) that is unique to plants and is essential for circadian rhythms, specifically for transcriptional regulation within the circadian clock. LUX is required for normal rhythmic expression of multiple clock outputs in both constant light and darkness. It is coregulated with TOC1 and seems to be repressed by CCA1 and LHY by direct binding of these proteins to the evening element in the LUX promoter.; PHYTOCLOCK 1 (PCL1); CONTAINS InterPro DOMAIN/s: Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G59570.1). & (reliability: 440.0) & (original description: Putative PCL1, Description = Transcription factor PCL1, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf09116_127484-131811' '(at4g28610 : 95.1) Similar to phosphate starvation response gene from Chlamydomonas. Weakly responsive to phosphate starvation. Acts upstream of PHO2 in phosphate signaling.; phosphate starvation response 1 (PHR1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G20400.1); Has 1692 Blast hits to 1675 proteins in 68 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 2; Plants - 1663; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative csp1, Description = Myb family transcription factor APL, PFAM = PF14379)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf09459_213415-227429' '(at3g24120 : 318.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G13640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative myb6, Description = Putative MYB transcription factor, PFAM = PF14379;PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf09628_260011-268468' '(at1g32240 : 191.0) Encodes a member of the KANADI family of putative transcription factors. Together with KAN1, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN1 and KAN4 appears to regulate the proper localization of PIN1 in early embryogenesis.; KANADI 2 (KAN2); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G17695.1); Has 1778 Blast hits to 1772 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 21; Plants - 1618; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative KAN2, Description = Probable transcription factor KAN2, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf09774_336568-343027' '(at2g20570 : 239.0) Encodes GLK1, Golden2-like 1, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK2, Golden2-like 2, is encoded by At5g44190. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.; GBF's pro-rich region-interacting factor 1 (GPRI1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GOLDEN2-like 2 (TAIR:AT5G44190.1). & (reliability: 478.0) & (original description: Putative GLK1, Description = Transcription activator GLK1, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf11137_10673-24691' '(at2g20570 : 222.0) Encodes GLK1, Golden2-like 1, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK2, Golden2-like 2, is encoded by At5g44190. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.; GBF's pro-rich region-interacting factor 1 (GPRI1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GOLDEN2-like 2 (TAIR:AT5G44190.1). & (reliability: 444.0) & (original description: Putative glk1, Description = Transcription activator GLK1-like protein, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf11767_45173-49378' '(at4g13640 : 85.5) unfertilized embryo sac 16 (UNE16); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24120.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative myb6, Description = Myb family transcription factor APL, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf12280_108746-123359' '(at5g06800 : 110.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G01060.1). & (reliability: 220.0) & (original description: Putative PHL1, Description = BnaA03g55680D protein, PFAM = PF14379)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf12321_49494-56226' '(at2g02060 : 92.4) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G14600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative MYBR14, Description = Putative Myb family transcription factor, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf14361_147432-162061' '(at1g32240 : 176.0) Encodes a member of the KANADI family of putative transcription factors. Together with KAN1, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN1 and KAN4 appears to regulate the proper localization of PIN1 in early embryogenesis.; KANADI 2 (KAN2); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G17695.1); Has 1778 Blast hits to 1772 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 21; Plants - 1618; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative kan1, Description = Putative Myb family transcription factor At1g14600 family, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf16258_57816-63801' '(at2g40260 : 103.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G38300.1); Has 1902 Blast hits to 1885 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 17; Plants - 1623; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative AT2G02060, Description = Putative Myb family transcription factor, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf18955_72163-76409' '(at3g04030 : 315.0) Homeodomain-like superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-related protein 1 (TAIR:AT5G18240.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 630.0) & (original description: Putative MYR2, Description = Myb-related protein 2, PFAM = PF14379;PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf27034_1-4751' '(at2g03500 : 271.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT1G68670.1); Has 20396 Blast hits to 7290 proteins in 193 species: Archae - 14; Bacteria - 20; Metazoa - 401; Fungi - 967; Plants - 1637; Viruses - 8; Other Eukaryotes - 17349 (source: NCBI BLink). & (reliability: 542.0) & (original description: Putative EFM, Description = Myb family transcription factor EFM, PFAM = PF00249)' T '27.3.20' 'RNA.regulation of transcription.G2-like transcription factor family, GARP' 'niben101scf31568_21699-28157' '(at2g02060 : 117.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G14600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative MYBR14, Description = MYBR domain class transcription factor, PFAM = PF00249)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'nbv0.3scaffold5200_44943-64712' '(q8s4w7|gai1_vitvi : 202.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g14920 : 189.0) Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA.; GIBBERELLIC ACID INSENSITIVE (GAI); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT2G01570.1); Has 2718 Blast hits to 2657 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2714; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative DELLA2, Description = DELLA protein 2, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'nbv0.3scaffold5324_3279-7510' '(at1g07530 : 639.0) Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm.; SCARECROW-like 14 (SCL14); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G29060.1); Has 2535 Blast hits to 2449 proteins in 301 species: Archae - 0; Bacteria - 12; Metazoa - 27; Fungi - 4; Plants - 2483; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|67150 : 351.0) no description available & (q69vg1|cigr1_orysa : 241.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (reliability: 1278.0) & (original description: Putative SCL9, Description = Scarecrow-like protein 9, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'nbv0.3scaffold12765_16613-20859' '(at1g07530 : 650.0) Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm.; SCARECROW-like 14 (SCL14); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G29060.1); Has 2535 Blast hits to 2449 proteins in 301 species: Archae - 0; Bacteria - 12; Metazoa - 27; Fungi - 4; Plants - 2483; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|67150 : 337.0) no description available & (q69vg1|cigr1_orysa : 221.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (reliability: 1300.0) & (original description: Putative SCL14, Description = Scarecrow-like protein 14, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'nbv0.3scaffold26365_2544-6169' '(at4g17230 : 606.0) Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family.; SCARECROW-like 13 (SCL13); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: scarecrow-like 5 (TAIR:AT1G50600.1); Has 2512 Blast hits to 2467 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 516.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 336.0) no description available & (reliability: 1212.0) & (original description: Putative SCL13, Description = Scarecrow-like protein 13, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'nbv0.3scaffold26660_12320-17815' '(gnl|cdd|67150 : 330.0) no description available & (q8s4w7|gai1_vitvi : 309.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 299.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 548.0) & (original description: Putative ATA, Description = Transcription factor, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'nbv0.3scaffold31263_15-3952' '(at5g59450 : 489.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G46600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67150 : 314.0) no description available & (q69vg1|cigr1_orysa : 203.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (reliability: 936.0) & (original description: Putative SCL11, Description = Scarecrow-like protein 11, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'nbv0.3scaffold35012_2006-5295' '(at3g49950 : 360.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G67411.1); Has 2188 Blast hits to 2164 proteins in 278 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2186; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 255.0) no description available & (q8gve1|cigr2_orysa : 179.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (reliability: 720.0) & (original description: Putative SCL32, Description = Scarecrow-like protein 32, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'nbv0.5scaffold26_43608-47488' '(gnl|cdd|67150 : 202.0) no description available & (at1g66350 : 176.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8s4w7|gai1_vitvi : 172.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 318.0) & (original description: Putative GRAS2, Description = GRAS family protein, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'nbv0.5scaffold270_797547-801484' '(at5g59450 : 483.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G46600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67150 : 314.0) no description available & (q69vg1|cigr1_orysa : 203.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (reliability: 936.0) & (original description: Putative SCL11, Description = Scarecrow-like protein 11, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'nbv0.5scaffold5986_43483-47108' '(at4g17230 : 608.0) Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family.; SCARECROW-like 13 (SCL13); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: scarecrow-like 5 (TAIR:AT1G50600.1); Has 2512 Blast hits to 2467 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 516.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 335.0) no description available & (reliability: 1216.0) & (original description: Putative SCL13, Description = Scarecrow-like protein 13, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'nbv0.5scaffold6266_9739-15234' '(gnl|cdd|67150 : 331.0) no description available & (q8s4w7|gai1_vitvi : 310.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 299.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 548.0) & (original description: Putative ATA, Description = Transcription factor, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben044scf00002677ctg047_1523-5915' '(at1g07530 : 642.0) Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm.; SCARECROW-like 14 (SCL14); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G29060.1); Has 2535 Blast hits to 2449 proteins in 301 species: Archae - 0; Bacteria - 12; Metazoa - 27; Fungi - 4; Plants - 2483; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|67150 : 338.0) no description available & (q69vg1|cigr1_orysa : 221.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (reliability: 1284.0) & (original description: Putative SCL14, Description = Scarecrow-like protein 14, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben044scf00003256ctg021_1876-5440' '(gnl|cdd|67150 : 143.0) no description available & (q5ne24|nsp2_medtr : 107.0) Nodulation signaling pathway 2 protein - Medicago truncatula (Barrel medic) & (at5g17490 : 90.5) DELLA subfamily member involved in GA signal transduction; RGA-like protein 3 (RGL3); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative GRAS5, Description = GRAS5, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben044scf00004532ctg011_12509-15653' '(at3g49950 : 358.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G67411.1); Has 2188 Blast hits to 2164 proteins in 278 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2186; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 251.0) no description available & (q8gve1|cigr2_orysa : 169.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (reliability: 716.0) & (original description: Putative SCL32, Description = Scarecrow-like protein 32, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben044scf00010002ctg016_2629-6458' '(gnl|cdd|67150 : 257.0) no description available & (q8s4w7|gai1_vitvi : 254.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g14920 : 253.0) Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA.; GIBBERELLIC ACID INSENSITIVE (GAI); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT2G01570.1); Has 2718 Blast hits to 2657 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2714; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 476.0) & (original description: Putative GRAS32, Description = GRAS32 protein, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf00262_615553-619673' '(at1g07530 : 466.0) Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm.; SCARECROW-like 14 (SCL14); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G29060.1); Has 2535 Blast hits to 2449 proteins in 301 species: Archae - 0; Bacteria - 12; Metazoa - 27; Fungi - 4; Plants - 2483; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|67150 : 310.0) no description available & (q69vg1|cigr1_orysa : 212.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (reliability: 932.0) & (original description: Putative GRAS4, Description = GRAS4, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf00709_130046-133404' '(at3g49950 : 504.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G67411.1); Has 2188 Blast hits to 2164 proteins in 278 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2186; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 242.0) no description available & (q8gve1|cigr2_orysa : 144.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (reliability: 1008.0) & (original description: Putative SCL32, Description = Scarecrow-like protein 32, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf01221_596536-599639' '(gnl|cdd|67150 : 174.0) no description available & (at3g03450 : 101.0) Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.; RGA-like 2 (RGL2); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2697 Blast hits to 2637 proteins in 314 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2690; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q6ei06|gaip_cucma : 97.8) DELLA protein GAIP (Gibberellic acid-insensitive phloem protein) (GAIP) (CmGAIP) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 183.4) & (original description: Putative GRAS38, Description = GRAS family transcription factor, putative, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf01234_276768-280393' '(at4g17230 : 610.0) Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family.; SCARECROW-like 13 (SCL13); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: scarecrow-like 5 (TAIR:AT1G50600.1); Has 2512 Blast hits to 2467 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 520.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 340.0) no description available & (reliability: 1220.0) & (original description: Putative SCL13, Description = SCL domain class transcription factor, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf01353_99074-102265' '(gnl|cdd|67150 : 229.0) no description available & (at3g03450 : 186.0) Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.; RGA-like 2 (RGL2); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2697 Blast hits to 2637 proteins in 314 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2690; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q8s4w7|gai1_vitvi : 176.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 344.0) & (original description: Putative GRAS2, Description = GRAS family transcription factor, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf01365_673693-677087' '(gnl|cdd|67150 : 239.0) no description available & (at2g04890 : 190.0) Encodes a scarecrow-like protein (SCL21). Member of GRAS gene family.; SCARECROW-like 21 (SCL21); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G48150.2); Has 2478 Blast hits to 2441 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2474; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8s4w7|gai1_vitvi : 187.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 354.0) & (original description: Putative glysoja_024156, Description = DELLA protein GAI, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf02048_79707-83338' '(at4g17230 : 603.0) Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family.; SCARECROW-like 13 (SCL13); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: scarecrow-like 5 (TAIR:AT1G50600.1); Has 2512 Blast hits to 2467 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 525.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 342.0) no description available & (reliability: 1206.0) & (original description: Putative SCL13, Description = Scarecrow-like protein 13, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf02188_304608-310101' '(gnl|cdd|67150 : 327.0) no description available & (q8s4w7|gai1_vitvi : 300.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 295.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 538.0) & (original description: Putative ATA, Description = Transcription factor, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf02749_387679-391289' '(q4vyc8|nsp1_medtr : 525.0) Nodulation signaling pathway 1 protein - Medicago truncatula (Barrel medic) & (at3g13840 : 419.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G49950.1); Has 2103 Blast hits to 2091 proteins in 270 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 190.0) no description available & (reliability: 838.0) & (original description: Putative nsp1, Description = Nodulation signaling pathway 1 protein, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf02911_705964-709526' '(at4g17230 : 566.0) Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family.; SCARECROW-like 13 (SCL13); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: scarecrow-like 5 (TAIR:AT1G50600.1); Has 2512 Blast hits to 2467 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 500.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 335.0) no description available & (reliability: 1132.0) & (original description: Putative SCL13, Description = Scarecrow-like protein 13, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf03202_1307706-1345029' '(gnl|cdd|67150 : 145.0) no description available & (q5ne24|nsp2_medtr : 105.0) Nodulation signaling pathway 2 protein - Medicago truncatula (Barrel medic) & (at5g17490 : 90.5) DELLA subfamily member involved in GA signal transduction; RGA-like protein 3 (RGL3); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative GRAS5, Description = GRAS5, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf03240_49836-55165' '(q8s4w7|gai1_vitvi : 384.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at3g03450 : 360.0) Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.; RGA-like 2 (RGL2); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2697 Blast hits to 2637 proteins in 314 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2690; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|67150 : 256.0) no description available & (reliability: 664.0) & (original description: Putative RGL, Description = ELLA domain GRAS family transcription factor, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf03473_87067-90529' '(gnl|cdd|67150 : 238.0) no description available & (q8s4w7|gai1_vitvi : 187.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at5g48150 : 185.0) Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway.; phytochrome a signal transduction 1 (PAT1); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 21 (TAIR:AT2G04890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative glysoja_024156, Description = DELLA protein GAI, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf03541_2332-16303' '(at4g17230 : 609.0) Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family.; SCARECROW-like 13 (SCL13); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: scarecrow-like 5 (TAIR:AT1G50600.1); Has 2512 Blast hits to 2467 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 522.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 339.0) no description available & (reliability: 1218.0) & (original description: Putative SCL13, Description = Scarecrow-like protein 13, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf03944_292579-295460' '(at1g07530 : 102.0) Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm.; SCARECROW-like 14 (SCL14); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G29060.1); Has 2535 Blast hits to 2449 proteins in 301 species: Archae - 0; Bacteria - 12; Metazoa - 27; Fungi - 4; Plants - 2483; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative GRAS07, Description = GRAS family transcription factor, PFAM = )' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf04010_89864-93084' '(at1g55580 : 361.0) Encodes a member of the GRAS family of putative transcriptional regulators. It is involved in the initiation of axillary meristems during both the vegetative and reproductive growth phases and functions upstream of REV and AXR1 in the regulation of shoot branching.; Lateral Suppressor (LAS); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: secondary shoot formation, regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2438 Blast hits to 2402 proteins in 286 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 4; Plants - 2430; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 307.0) no description available & (q84mm9|moc_orysa : 250.0) Protein MONOCULM 1 - Oryza sativa (Rice) & (reliability: 722.0) & (original description: Putative Ls, Description = Lateral suppressor protein, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf04382_131133-135364' '(at1g07530 : 600.0) Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm.; SCARECROW-like 14 (SCL14); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G29060.1); Has 2535 Blast hits to 2449 proteins in 301 species: Archae - 0; Bacteria - 12; Metazoa - 27; Fungi - 4; Plants - 2483; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|67150 : 351.0) no description available & (q69vg1|cigr1_orysa : 242.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (reliability: 1200.0) & (original description: Putative SCL14, Description = Scarecrow-like protein 14, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf04819_437888-441625' '(gnl|cdd|67150 : 220.0) no description available & (q8s4w7|gai1_vitvi : 175.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 169.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative GRAS2, Description = GRAS family protein, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf04960_37356-40648' '(at3g49950 : 364.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G67411.1); Has 2188 Blast hits to 2164 proteins in 278 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2186; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 256.0) no description available & (q8gve1|cigr2_orysa : 179.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (reliability: 728.0) & (original description: Putative SCL32, Description = Scarecrow-like protein 32, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf05241_141967-145187' '(at1g55580 : 368.0) Encodes a member of the GRAS family of putative transcriptional regulators. It is involved in the initiation of axillary meristems during both the vegetative and reproductive growth phases and functions upstream of REV and AXR1 in the regulation of shoot branching.; Lateral Suppressor (LAS); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: secondary shoot formation, regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2438 Blast hits to 2402 proteins in 286 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 4; Plants - 2430; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 307.0) no description available & (q84mm9|moc_orysa : 257.0) Protein MONOCULM 1 - Oryza sativa (Rice) & (reliability: 736.0) & (original description: Putative ls, Description = Lateral suppressor, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf06996_225465-229402' '(at5g59450 : 489.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G46600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67150 : 314.0) no description available & (q69vg1|cigr1_orysa : 204.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (reliability: 936.0) & (original description: Putative SCL11, Description = Scarecrow-like protein 11, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf07391_71756-75783' '(at1g63100 : 612.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G54220.1); Has 2506 Blast hits to 2453 proteins in 309 species: Archae - 0; Bacteria - 4; Metazoa - 16; Fungi - 0; Plants - 2441; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|67150 : 321.0) no description available & (q8s4w7|gai1_vitvi : 237.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 1224.0) & (original description: Putative SCL28, Description = Scarecrow-like protein 28, PFAM = PF03514)' T '27.3.21' 'RNA.regulation of transcription.GRAS transcription factor family' 'niben101scf09994_22194-26230' '(at1g63100 : 568.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G54220.1); Has 2506 Blast hits to 2453 proteins in 309 species: Archae - 0; Bacteria - 4; Metazoa - 16; Fungi - 0; Plants - 2441; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|67150 : 319.0) no description available & (q8s4w7|gai1_vitvi : 209.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 1136.0) & (original description: Putative PAL1B, Description = Scarecrow-like protein 28, PFAM = PF03514)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold65_99198-107558' '(at2g34710 : 1315.0) Dominant PHB mutations cause transformation of abaxial leaf fates into adaxial leaf fates. Encodes a member of HD-Zip family which contains homeodomain-leucine zipper domains and domain similar to a mammalian sterol binding domain. Has overlapping functions with PHAVOLUTA, REVOLUTA and CORONA.; PHABULOSA (PHB); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), MEKHLA (InterPro:IPR013978), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein (TAIR:AT1G30490.1); Has 3393 Blast hits to 3288 proteins in 275 species: Archae - 0; Bacteria - 20; Metazoa - 905; Fungi - 114; Plants - 2320; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|87593 : 219.0) no description available & (reliability: 2630.0) & (original description: Putative HOX32, Description = Homeobox-leucine zipper protein HOX32, PFAM = PF00046;PF01852;PF08670)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold3849_4003-7787' '(at3g01470 : 135.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.; homeobox 1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress, response to blue light, positive regulation of transcription, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 12515 Blast hits to 12478 proteins in 547 species: Archae - 0; Bacteria - 0; Metazoa - 9969; Fungi - 258; Plants - 2039; Viruses - 5; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|35704 : 111.0) no description available & (reliability: 270.0) & (original description: Putative HD12, Description = HD domain class transcription factor, PFAM = PF02183;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold4702_1-3732' '(at4g37790 : 174.0) Encodes homeobox protein HAT22, member of the HD-Zip II family.; HAT22; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, response to cytokinin stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein family (TAIR:AT2G22800.1); Has 6652 Blast hits to 6630 proteins in 455 species: Archae - 0; Bacteria - 0; Metazoa - 4237; Fungi - 277; Plants - 2018; Viruses - 3; Other Eukaryotes - 117 (source: NCBI BLink). & (gnl|cdd|35704 : 118.0) no description available & (reliability: 338.0) & (original description: Putative HAT2, Description = Homeobox associated leucine zipper protein, PFAM = PF00046;PF02183)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold5997_44712-52718' '(o04135|knap2_maldo : 415.0) Homeobox protein knotted-1-like 2 (KNAP2) - Malus domestica (Apple) (Malus sylvestris) & (at4g08150 : 363.0) A member of class I knotted1-like homeobox gene family (together with KNAT2). Similar to the knotted1 (kn1) homeobox gene of maize. Normally expressed in the peripheral and rib zone of shoot apical meristem but not in the leaf primordia. It is also expressed in the fourth floral whorl, in the region that would become style, particularly in the cell surrounding the transmitting tissue. No expression was detected in the first three floral whorls. Expression is repressed by auxin and AS1 which results in the promotion of leaf fate.; KNOTTED-like from Arabidopsis thaliana (KNAT1); CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOX/ELK homeobox transcription factor (TAIR:AT1G62360.1); Has 31270 Blast hits to 14770 proteins in 476 species: Archae - 4; Bacteria - 107; Metazoa - 2529; Fungi - 972; Plants - 3913; Viruses - 2; Other Eukaryotes - 23743 (source: NCBI BLink). & (gnl|cdd|35992 : 141.0) no description available & (gnl|cdd|67408 : 83.7) no description available & (reliability: 726.0) & (original description: Putative KN1, Description = Homeotic protein knotted-1, PFAM = PF03789;PF03790;PF05920;PF03791)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold6006_50663-54085' '(at5g65310 : 125.0) Encodes a class I HDZip (homeodomain-leucine zipper) protein that is a positive regulator of ABA-responsiveness, mediating the inhibitory effect of ABA on growth during seedling establishment.; homeobox protein 5 (HB5); FUNCTIONS IN: sequence-specific DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of transcription, abscisic acid mediated signaling pathway, regulation of abscisic acid mediated signaling pathway, regulation of transcription, DNA-dependent, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 10595 Blast hits to 10554 proteins in 566 species: Archae - 0; Bacteria - 4; Metazoa - 8208; Fungi - 200; Plants - 1989; Viruses - 5; Other Eukaryotes - 189 (source: NCBI BLink). & (gnl|cdd|35704 : 102.0) no description available & (reliability: 250.0) & (original description: Putative HD18, Description = HD domain class transcription factor, PFAM = PF02183;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold6286_27427-33353' '(at4g16780 : 228.0) Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin.; homeobox protein 2 (HB-2); CONTAINS InterPro DOMAIN/s: HD-ZIP protein, N-terminal (InterPro:IPR006712), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT5G47370.1); Has 7230 Blast hits to 7123 proteins in 465 species: Archae - 0; Bacteria - 0; Metazoa - 4716; Fungi - 327; Plants - 2046; Viruses - 18; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|35704 : 146.0) no description available & (gnl|cdd|68199 : 80.9) no description available & (reliability: 456.0) & (original description: Putative HAT1, Description = Homeobox associated leucine zipper protein, PFAM = PF04618;PF00046;PF02183)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold7564_14412-35868' '(at5g44180 : 1166.0) Homeodomain-like transcriptional regulator; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), Homeobox (InterPro:IPR001356), DDT domain (InterPro:IPR004022), Homeodomain-like (InterPro:IPR009057), DDT domain, subgroup (InterPro:IPR018500), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-1 (TAIR:AT1G28420.1). & (reliability: 2332.0) & (original description: Putative hox7, Description = Homeobox protein, PFAM = PF02791;PF05066;PF15613;PF15612;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold9651_15755-20597' '(at3g03660 : 202.0) Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box.; WUSCHEL related homeobox 11 (WOX11); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 12 (TAIR:AT5G17810.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative WOX11, Description = WUSCHEL-related homeobox 11, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold11240_22509-25573' '(at2g22800 : 231.0) Encodes homeobox protein HAT9.; HAT9; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein family (TAIR:AT4G37790.1); Has 6755 Blast hits to 6732 proteins in 464 species: Archae - 0; Bacteria - 0; Metazoa - 4333; Fungi - 266; Plants - 2037; Viruses - 7; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|35704 : 127.0) no description available & (reliability: 462.0) & (original description: Putative HAT22, Description = Homeobox-leucine zipper protein HAT22, PFAM = PF00046;PF02183)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold11520_30261-37895' '(at5g02030 : 277.0) Mutant has additional lateral organs and phyllotaxy defect. Encodes a homeodomain transcription factor. Has sequence similarity to the Arabidopsis ovule development regulator Bell1. Binds directly to the AGAMOUS cis-regulatory element. Its localization to the nucleus is dependent on the coexpression of either STM or BP.; REPLUMLESS (RPL); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 8 (TAIR:AT2G27990.1); Has 5109 Blast hits to 5109 proteins in 341 species: Archae - 0; Bacteria - 2; Metazoa - 2052; Fungi - 344; Plants - 2481; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|35992 : 158.0) no description available & (gnl|cdd|70974 : 123.0) no description available & (reliability: 554.0) & (original description: Putative qSH1, Description = BEL1-like homeodomain protein 9, PFAM = PF05920;PF07526)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold11844_848-5453' '(at2g35940 : 416.0) Encodes a member of the BEL-like homeodomain protein family. Ecotopic expression in the embryo sac leads to defects in nuclear migration and cellularization and embryo sacs with multiple egg cells. Loss of function alleles have no female gametophyte defects. The ecotopic expression phenotype requires KNAT3 because it can be suppressed by loss of KNAT3 function alleles. Localized to the nucleus but interaction with OFP1 relocates it to the cytoplasm.; BEL1-like homeodomain 1 (BLH1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 6 (TAIR:AT4G34610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35992 : 173.0) no description available & (gnl|cdd|70974 : 166.0) no description available & (reliability: 832.0) & (original description: Putative BLH1, Description = BEL1-like homeodomain protein 1, PFAM = PF07526;PF05920)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold12778_1321-4981' '(at1g69780 : 172.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; ATHB13; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cotyledon morphogenesis, regulation of transcription, DNA-dependent, response to sucrose stimulus, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT1G26960.1); Has 11763 Blast hits to 11710 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9272; Fungi - 193; Plants - 2061; Viruses - 5; Other Eukaryotes - 232 (source: NCBI BLink). & (gnl|cdd|35704 : 129.0) no description available & (reliability: 344.0) & (original description: Putative HAT7, Description = Homeobox-leucine zipper protein HAT7, PFAM = PF02183;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold21922_25095-29465' '(at2g22430 : 185.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein that is a target of the protein phosphatase ABI1 and regulates hormone responses in Arabidopsis.; homeobox protein 6 (HB6); FUNCTIONS IN: protein binding, sequence-specific DNA binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to water deprivation, positive regulation of transcription, abscisic acid mediated signaling pathway, negative regulation of abscisic acid mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 10935 Blast hits to 10899 proteins in 558 species: Archae - 5; Bacteria - 20; Metazoa - 8544; Fungi - 195; Plants - 1932; Viruses - 5; Other Eukaryotes - 234 (source: NCBI BLink). & (gnl|cdd|35704 : 118.0) no description available & (reliability: 370.0) & (original description: Putative hdz10, Description = Homeobox-leucine zipper protein ATHB-16, PFAM = PF00046;PF02183)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold23783_2089-18797' '(at5g25220 : 381.0) A member of class II knotted1-like homeobox gene family (together with KNAT4 and KNAT5). Expressed in: hypocotyl-root boundary, anther-filament junction in flowers, ovule-funiculus and peduncle-silique boundaries, petioles and root. Light-regulated expression with differential response to red/far-red light. KNAT3 promoter activity showed cell-type specific pattern along longitudinal root axis, restricted mainly to the differentiation zone of the root, namely in the cortex and pericycle. Not detected in lateral root primordia; KNOTTED1-like homeobox gene 3 (KNAT3); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to light stimulus, detection of cytokinin stimulus, cellular response to cytokine stimulus; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 35 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ELK (InterPro:IPR005539), KNOX1 (InterPro:IPR005540), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), KNOX2 (InterPro:IPR005541), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 4 (TAIR:AT5G11060.1); Has 6026 Blast hits to 5994 proteins in 341 species: Archae - 0; Bacteria - 2; Metazoa - 2058; Fungi - 371; Plants - 3387; Viruses - 4; Other Eukaryotes - 204 (source: NCBI BLink). & (o04136|knap3_maldo : 374.0) Homeobox protein knotted-1-like 3 (KNAP3) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|35992 : 160.0) no description available & (reliability: 762.0) & (original description: Putative KNAT5, Description = Homeobox protein knotted-1-like 5, PFAM = PF03790;PF03791;PF05920)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold29408_1-4007' '(at4g16780 : 280.0) Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin.; homeobox protein 2 (HB-2); CONTAINS InterPro DOMAIN/s: HD-ZIP protein, N-terminal (InterPro:IPR006712), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT5G47370.1); Has 7230 Blast hits to 7123 proteins in 465 species: Archae - 0; Bacteria - 0; Metazoa - 4716; Fungi - 327; Plants - 2046; Viruses - 18; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|35704 : 153.0) no description available & (gnl|cdd|68199 : 97.9) no description available & (reliability: 560.0) & (original description: Putative HAT4, Description = Homeobox-leucine zipper protein HAT4, PFAM = PF02183;PF04618;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold30880_10899-19639' '(at1g52150 : 1359.0) Member of the class III HD-ZIP protein family. Contains homeodomain and leucine zipper domain. Critical for vascular development and negatively regulates vascular cell differentiation.; ATHB-15; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), MEKHLA (InterPro:IPR013978), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox gene 8 (TAIR:AT4G32880.1); Has 3126 Blast hits to 3055 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 767; Fungi - 91; Plants - 2233; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|87593 : 236.0) no description available & (reliability: 2718.0) & (original description: Putative hb3, Description = Class III homeodomain leucine zipper protein, PFAM = PF01852;PF08670;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold34226_273-5123' '(at1g69780 : 249.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; ATHB13; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cotyledon morphogenesis, regulation of transcription, DNA-dependent, response to sucrose stimulus, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT1G26960.1); Has 11763 Blast hits to 11710 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9272; Fungi - 193; Plants - 2061; Viruses - 5; Other Eukaryotes - 232 (source: NCBI BLink). & (gnl|cdd|35704 : 135.0) no description available & (reliability: 498.0) & (original description: Putative HAT5, Description = Homeobox-leucine zipper protein HOX21, PFAM = PF00046;PF02183)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold35914_14582-18289' '(at4g36740 : 184.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; homeobox protein 40 (HB40); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: ovule, fruit, root, flower; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 21 (TAIR:AT2G18550.1); Has 8534 Blast hits to 8531 proteins in 458 species: Archae - 0; Bacteria - 0; Metazoa - 6212; Fungi - 217; Plants - 1981; Viruses - 4; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|35704 : 116.0) no description available & (reliability: 368.0) & (original description: Putative gt1, Description = Homeobox-leucine zipper protein HAT5, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold39460_5720-10372' '(at3g18010 : 181.0) Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. Its mRNA is expressed in the initiating vascular primordium of the cotyledons during heart and torpedo stages.; WUSCHEL related homeobox 1 (WOX1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 2 (TAIR:AT5G59340.1); Has 587 Blast hits to 587 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 587; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q6ybv1|wus_antma : 96.7) Protein WUSCHEL (Protein ROSULATA) - Antirrhinum majus (Garden snapdragon) & (reliability: 362.0) & (original description: Putative wox1, Description = Putative wuschel homeobox protein WOX1, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold39635_6199-19594' '(at4g36870 : 376.0) Encodes a member of the BEL family of homeodomain proteins. Plants doubly mutant for saw1/saw2 (blh2/blh4) have serrated leaves. BP is expressed in the serrated leaves, therefore saw1/saw1 may act redundantly to repress BP in leaves.; BEL1-like homeodomain 2 (BLH2); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 4 (TAIR:AT2G23760.3); Has 5744 Blast hits to 5713 proteins in 356 species: Archae - 0; Bacteria - 3; Metazoa - 2532; Fungi - 390; Plants - 2517; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). & (gnl|cdd|35992 : 181.0) no description available & (gnl|cdd|70974 : 162.0) no description available & (reliability: 752.0) & (original description: Putative BLH2, Description = BEL1-like homeodomain protein 2, PFAM = PF05920;PF07526)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold41601_4102-15736' '(at3g18380 : 317.0) sequence-specific DNA binding transcription factors;sequence-specific DNA binding; FUNCTIONS IN: sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15215.2). & (reliability: 634.0) & (original description: Putative SHH2, Description = Protein SAWADEE HOMEODOMAIN HOMOLOG 2, PFAM = PF16719)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold52886_1178-8420' '(at1g62990 : 428.0) Encodes a homeodomain transcription factor of the Knotted family. May be involved in secondary cell wall biosynthesis. Mutants have moderately irregular xylem development. Expression of this gene is upregulated by SND1 and MYB46.; KNOTTED-like homeobox of Arabidopsis thaliana 7 (KNAT7); CONTAINS InterPro DOMAIN/s: ELK (InterPro:IPR005539), KNOX1 (InterPro:IPR005540), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), KNOX2 (InterPro:IPR005541), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 3 (TAIR:AT5G25220.1); Has 5187 Blast hits to 5186 proteins in 324 species: Archae - 0; Bacteria - 0; Metazoa - 1947; Fungi - 303; Plants - 2774; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink). & (p46606|hd1_brana : 424.0) Homeobox protein HD1 - Brassica napus (Rape) & (gnl|cdd|35992 : 170.0) no description available & (reliability: 856.0) & (original description: Putative KNAT7, Description = Homeobox protein knotted-1-like 7, PFAM = PF03791;PF05920;PF03790)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold75408_2768-8086' '(at4g35550 : 210.0) Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. WOX13 is the only family member that does not contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box.; WUSCHEL related homeobox 13 (WOX13); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 14 (TAIR:AT1G20700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 420.0) & (original description: Putative WOX13, Description = WUSCHEL-related homeobox 13, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold78734_1704-7286' '(at4g35550 : 228.0) Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. WOX13 is the only family member that does not contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box.; WUSCHEL related homeobox 13 (WOX13); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 14 (TAIR:AT1G20700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative wox13, Description = WUSCHEL-related homeobox 8, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.3scaffold83711_1-6475' '(p46608|hsbh1_soybn : 395.0) Homeobox protein SBH1 - Glycine max (Soybean) & (at1g62360 : 376.0) Class I knotted-like homeodomain protein that is required for shoot apical meristem (SAM) formation during embryogenesis and for SAM function throughout the lifetime of the plant. Functions by preventing incorporation of cells in the meristem center into differentiating organ primordia.; SHOOT MERISTEMLESS (STM); CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED-like from Arabidopsis thaliana (TAIR:AT4G08150.1); Has 6066 Blast hits to 6064 proteins in 384 species: Archae - 0; Bacteria - 0; Metazoa - 1706; Fungi - 298; Plants - 3900; Viruses - 0; Other Eukaryotes - 162 (source: NCBI BLink). & (gnl|cdd|35992 : 143.0) no description available & (gnl|cdd|67408 : 83.4) no description available & (reliability: 752.0) & (original description: Putative ina, Description = Invaginata, PFAM = PF05920;PF03789;PF03790;PF03791)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.5scaffold1_1014248-1072166' '(at1g46480 : 213.0) Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. This protein also contains an acidic domain approximately 10 residues upstream of the WUS box. Part of the TDIF-TDR-WOX4 signaling pathway that plays a crucial role in the maintenance of the vascular meristem organization during secondary growth.; WUSCHEL related homeobox 4 (WOX4); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 1 (TAIR:AT3G18010.1); Has 537 Blast hits to 535 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 537; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8ll11|wus_pethy : 95.9) Protein WUSCHEL (PhWUS) (Protein TERMINATOR) - Petunia hybrida (Petunia) & (reliability: 426.0) & (original description: Putative WOX4, Description = WUSCHEL-related homeobox 4, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.5scaffold21_896158-900529' '(at4g37790 : 171.0) Encodes homeobox protein HAT22, member of the HD-Zip II family.; HAT22; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, response to cytokinin stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein family (TAIR:AT2G22800.1); Has 6652 Blast hits to 6630 proteins in 455 species: Archae - 0; Bacteria - 0; Metazoa - 4237; Fungi - 277; Plants - 2018; Viruses - 3; Other Eukaryotes - 117 (source: NCBI BLink). & (gnl|cdd|35704 : 119.0) no description available & (reliability: 332.0) & (original description: Putative HAT2, Description = Homeobox associated leucine zipper protein, PFAM = PF02183;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.5scaffold138_522200-531249' '(at1g52150 : 1447.0) Member of the class III HD-ZIP protein family. Contains homeodomain and leucine zipper domain. Critical for vascular development and negatively regulates vascular cell differentiation.; ATHB-15; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), MEKHLA (InterPro:IPR013978), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox gene 8 (TAIR:AT4G32880.1); Has 3126 Blast hits to 3055 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 767; Fungi - 91; Plants - 2233; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|87593 : 228.0) no description available & (reliability: 2894.0) & (original description: Putative hb3, Description = Class III homeodomain leucine zipper protein, PFAM = PF01852;PF00046;PF08670)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.5scaffold372_612651-618247' '(at4g35550 : 228.0) Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. WOX13 is the only family member that does not contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box.; WUSCHEL related homeobox 13 (WOX13); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 14 (TAIR:AT1G20700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative WOX8, Description = WUSCHEL-related homeobox 8, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.5scaffold988_145275-148026' '(at3g01470 : 102.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.; homeobox 1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress, response to blue light, positive regulation of transcription, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 12515 Blast hits to 12478 proteins in 547 species: Archae - 0; Bacteria - 0; Metazoa - 9969; Fungi - 258; Plants - 2039; Viruses - 5; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|35704 : 97.5) no description available & (reliability: 204.0) & (original description: Putative HAT7, Description = Helix-turn-helix motif-containing protein, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.5scaffold1470_22808-26095' '(at2g22800 : 212.0) Encodes homeobox protein HAT9.; HAT9; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein family (TAIR:AT4G37790.1); Has 6755 Blast hits to 6732 proteins in 464 species: Archae - 0; Bacteria - 0; Metazoa - 4333; Fungi - 266; Plants - 2037; Viruses - 7; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|35704 : 135.0) no description available & (reliability: 424.0) & (original description: Putative HAT9, Description = Homeobox-leucine zipper protein HAT9, PFAM = PF02183;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.5scaffold1584_270499-275740' '(at1g73360 : 872.0) Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. It is involved in trichome branching.; homeodomain GLABROUS 11 (HDG11); CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 12 (TAIR:AT1G17920.1); Has 12070 Blast hits to 11936 proteins in 534 species: Archae - 0; Bacteria - 0; Metazoa - 9179; Fungi - 319; Plants - 2364; Viruses - 8; Other Eukaryotes - 200 (source: NCBI BLink). & (gnl|cdd|29139 : 186.0) no description available & (reliability: 1744.0) & (original description: Putative HDG11, Description = Homeobox-leucine zipper protein HDG11, PFAM = PF01852;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.5scaffold2097_160441-164332' '(at5g15150 : 155.0) homeobox-containing gene with an unusual feature: a leucine zipper motif adjacent to the carboxyl-terminal of the homeodomain structure. This gene is expressed primarily in the cortex of the root and the stem.; homeobox 3 (HB-3); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 20 (TAIR:AT3G01220.1); Has 11268 Blast hits to 11217 proteins in 570 species: Archae - 0; Bacteria - 6; Metazoa - 8826; Fungi - 177; Plants - 2030; Viruses - 5; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|35704 : 120.0) no description available & (reliability: 310.0) & (original description: Putative hdz10, Description = Homeobox-leucine zipper protein HOX21, PFAM = PF00046;PF02183)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.5scaffold2244_141161-145034' '(at3g01470 : 133.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.; homeobox 1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress, response to blue light, positive regulation of transcription, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 12515 Blast hits to 12478 proteins in 547 species: Archae - 0; Bacteria - 0; Metazoa - 9969; Fungi - 258; Plants - 2039; Viruses - 5; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|35704 : 111.0) no description available & (reliability: 266.0) & (original description: Putative ATHB6, Description = Transcription factor HEX, PFAM = PF00046;PF02183)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.5scaffold2650_6819-121270' '(at4g00730 : 637.0) Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development; ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29139 : 174.0) no description available & (reliability: 1274.0) & (original description: Putative ANL2, Description = Homeobox-leucine zipper protein ANTHOCYANINLESS 2, PFAM = PF00046;PF01852)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.5scaffold3130_14417-35885' '(at5g44180 : 1165.0) Homeodomain-like transcriptional regulator; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), Homeobox (InterPro:IPR001356), DDT domain (InterPro:IPR004022), Homeodomain-like (InterPro:IPR009057), DDT domain, subgroup (InterPro:IPR018500), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-1 (TAIR:AT1G28420.1). & (reliability: 2330.0) & (original description: Putative RLT1, Description = Homeobox-DDT domain protein RLT1, PFAM = PF02791;PF15612;PF00046;PF15613;PF05066)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'nbv0.5scaffold9405_4524-8264' '(at3g01470 : 130.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.; homeobox 1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress, response to blue light, positive regulation of transcription, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 12515 Blast hits to 12478 proteins in 547 species: Archae - 0; Bacteria - 0; Metazoa - 9969; Fungi - 258; Plants - 2039; Viruses - 5; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|35704 : 113.0) no description available & (reliability: 260.0) & (original description: Putative HD12, Description = HD domain class transcription factor, PFAM = PF02183;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00002932ctg019_293-5600' '(at4g34610 : 303.0) BEL1-like homeodomain 6 (BLH6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 7 (TAIR:AT2G16400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35992 : 178.0) no description available & (gnl|cdd|70974 : 159.0) no description available & (reliability: 606.0) & (original description: Putative BnaA02g17200D, Description = BnaA02g17200D protein, PFAM = PF07526;PF05920)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00003240ctg005_617-15245' '(at1g73360 : 500.0) Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. It is involved in trichome branching.; homeodomain GLABROUS 11 (HDG11); CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 12 (TAIR:AT1G17920.1); Has 12070 Blast hits to 11936 proteins in 534 species: Archae - 0; Bacteria - 0; Metazoa - 9179; Fungi - 319; Plants - 2364; Viruses - 8; Other Eukaryotes - 200 (source: NCBI BLink). & (gnl|cdd|29139 : 154.0) no description available & (reliability: 1000.0) & (original description: Putative BnaA02g03520D, Description = BnaA02g03520D protein, PFAM = PF01852;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00003749ctg004_1-3370' '(at3g01470 : 134.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.; homeobox 1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress, response to blue light, positive regulation of transcription, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 12515 Blast hits to 12478 proteins in 547 species: Archae - 0; Bacteria - 0; Metazoa - 9969; Fungi - 258; Plants - 2039; Viruses - 5; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|35704 : 112.0) no description available & (reliability: 268.0) & (original description: Putative hdz10, Description = Homeobox-leucine zipper protein HAT5, PFAM = PF00046;PF02183)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00003788ctg014_1-1694' '(at5g06710 : 130.0) Homeobox-leucine zipper protein.; homeobox from Arabidopsis thaliana (HAT14); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT4G17460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35704 : 104.0) no description available & (reliability: 242.0) & (original description: Putative HAT3, Description = Homeobox associated leucine zipper protein, PFAM = PF02183;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00006406ctg010_2806-7152' '(at4g32980 : 306.0) Encodes transcription factor involved in photomorphogenesis. Regulates gibberellin biosynthesis. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed at low levels in developing stamens. Increased levels of ATH1 severely delay flowering in the C24 accession. Most remarkably, ectopically expressed ATH1 hardly had an effect on flowering time in the Col-0 and Ler accessions. ATH1 physically interacts with STM, BP and KNAT6 and enhances the shoot apical meristem defect of some of these genes suggesting a role in SAM maintenance. Nuclear localization is dependent upon interaction with STM.; homeobox gene 1 (ATH1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 7 (TAIR:AT2G16400.1); Has 5042 Blast hits to 5042 proteins in 335 species: Archae - 0; Bacteria - 0; Metazoa - 2114; Fungi - 285; Plants - 2468; Viruses - 0; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|35992 : 118.0) no description available & (gnl|cdd|70974 : 105.0) no description available & (reliability: 612.0) & (original description: Putative BL4, Description = Bell-like homeodomain protein 4, PFAM = PF05920;PF07526)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00006998ctg010_2358-9049' '(at4g36870 : 331.0) Encodes a member of the BEL family of homeodomain proteins. Plants doubly mutant for saw1/saw2 (blh2/blh4) have serrated leaves. BP is expressed in the serrated leaves, therefore saw1/saw1 may act redundantly to repress BP in leaves.; BEL1-like homeodomain 2 (BLH2); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 4 (TAIR:AT2G23760.3); Has 5744 Blast hits to 5713 proteins in 356 species: Archae - 0; Bacteria - 3; Metazoa - 2532; Fungi - 390; Plants - 2517; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). & (gnl|cdd|70974 : 163.0) no description available & (gnl|cdd|35992 : 143.0) no description available & (reliability: 662.0) & (original description: Putative BEL1, Description = BEL1-like homeodomain protein 2, PFAM = PF05920;PF07526)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00007647ctg005_2694-10226' '(at4g04890 : 1153.0) Encodes a homeodomain protein that is expressed in the LI layer of the vegetative, floral and inflorescence meristems. Binds to the L1 box promoter element which is required in some proteins for L1 specific expression.; protodermal factor 2 (PDF2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: epidermal cell differentiation, regulation of transcription, DNA-dependent, cotyledon development; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein (TAIR:AT4G21750.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29139 : 216.0) no description available & (reliability: 2306.0) & (original description: Putative PDF2, Description = Homeobox-leucine zipper protein PROTODERMAL FACTOR 2, PFAM = PF00046;PF01852)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00008188ctg018_9044-13822' '(at4g32980 : 261.0) Encodes transcription factor involved in photomorphogenesis. Regulates gibberellin biosynthesis. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed at low levels in developing stamens. Increased levels of ATH1 severely delay flowering in the C24 accession. Most remarkably, ectopically expressed ATH1 hardly had an effect on flowering time in the Col-0 and Ler accessions. ATH1 physically interacts with STM, BP and KNAT6 and enhances the shoot apical meristem defect of some of these genes suggesting a role in SAM maintenance. Nuclear localization is dependent upon interaction with STM.; homeobox gene 1 (ATH1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 7 (TAIR:AT2G16400.1); Has 5042 Blast hits to 5042 proteins in 335 species: Archae - 0; Bacteria - 0; Metazoa - 2114; Fungi - 285; Plants - 2468; Viruses - 0; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|35992 : 106.0) no description available & (gnl|cdd|70974 : 99.6) no description available & (reliability: 522.0) & (original description: Putative ATH1, Description = Homeobox protein ATH1, PFAM = PF05920;PF07526)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00008313ctg002_694-6070' '(at1g27050 : 147.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; homeobox protein 54 (HB54); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); Has 5308 Blast hits to 5298 proteins in 368 species: Archae - 2; Bacteria - 4; Metazoa - 3484; Fungi - 119; Plants - 1607; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative PGSC0003DMG400017639, Description = Homeobox transcription factor, PFAM = PF00076)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00008313ctg008_8265-12345' '(at3g01470 : 131.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.; homeobox 1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress, response to blue light, positive regulation of transcription, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 12515 Blast hits to 12478 proteins in 547 species: Archae - 0; Bacteria - 0; Metazoa - 9969; Fungi - 258; Plants - 2039; Viruses - 5; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|35704 : 113.0) no description available & (reliability: 262.0) & (original description: Putative ATHB6, Description = Transcription factor HEX, PFAM = PF00046;PF02183)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00009443ctg014_914-8280' '(at4g00730 : 997.0) Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development; ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29139 : 207.0) no description available & (reliability: 1994.0) & (original description: Putative ANL2, Description = Homeobox-leucine zipper protein ANTHOCYANINLESS 2, PFAM = PF00046;PF01852)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00013376ctg000_2546-10735' '(p48786|prh_petcr : 260.0) Pathogenesis-related homeodomain protein (PRHP) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at3g19510 : 234.0) Encodes a member of the PHD-finger homeodomain protein family. The HAT3.1 homeodomain is highly divergent in sequence even at positions that are almost invariable among homeodomains. HAT3.1 shows a preference for the sequence T(A/G)(A/C)ACCA, different from those bound by other homeodomains.; HAT3.1; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of transcription, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: pathogenesis related homeodomain protein A (TAIR:AT4G29940.1); Has 21195 Blast hits to 13195 proteins in 937 species: Archae - 172; Bacteria - 5087; Metazoa - 6772; Fungi - 2621; Plants - 1255; Viruses - 207; Other Eukaryotes - 5081 (source: NCBI BLink). & (gnl|cdd|39500 : 124.0) no description available & (reliability: 468.0) & (original description: Putative PRH, Description = Pathogenesis-related homeodomain protein, PFAM = PF00628;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00014904ctg009_1173-8674' '(at5g46880 : 768.0) homeobox-7 (HB-7); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 4 (TAIR:AT4G17710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29139 : 183.0) no description available & (reliability: 1536.0) & (original description: Putative HDG5, Description = Homeobox-leucine zipper protein HDG5, PFAM = PF00046;PF01852)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00016412ctg005_1-3648' '(at5g03790 : 168.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) meristem identity regulator that acts together with LFY to induce CAL expression. It binds to the CAL promoter proximal CAATNATTG element. LMI1 acts primarily downstream of LFY in meristem identity regulation. The interaction between LFY, LMI1 and CAL resembles a feed-forward loop transcriptional network motif. The gene also had additional LFY-independent roles in leaf morphogenesis and bract formation.; homeobox 51 (HB51); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 22 (TAIR:AT2G36610.1); Has 11020 Blast hits to 10992 proteins in 578 species: Archae - 2; Bacteria - 0; Metazoa - 8622; Fungi - 156; Plants - 2028; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink). & (gnl|cdd|35704 : 118.0) no description available & (reliability: 336.0) & (original description: Putative Gl, Description = Multicellular trichome development class I homeodomain-leucine zipper transcription factor, PFAM = PF02183;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00017284ctg005_3553-11145' '(at3g18380 : 204.0) sequence-specific DNA binding transcription factors;sequence-specific DNA binding; FUNCTIONS IN: sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15215.2). & (reliability: 408.0) & (original description: Putative SHH1, Description = Protein SAWADEE HOMEODOMAIN HOMOLOG 1, PFAM = PF16719)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00017716ctg003_16023-20616' '(at5g15150 : 177.0) homeobox-containing gene with an unusual feature: a leucine zipper motif adjacent to the carboxyl-terminal of the homeodomain structure. This gene is expressed primarily in the cortex of the root and the stem.; homeobox 3 (HB-3); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 20 (TAIR:AT3G01220.1); Has 11268 Blast hits to 11217 proteins in 570 species: Archae - 0; Bacteria - 6; Metazoa - 8826; Fungi - 177; Plants - 2030; Viruses - 5; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|35704 : 120.0) no description available & (reliability: 354.0) & (original description: Putative hdz10, Description = Homeobox-leucine zipper protein HAT5, PFAM = PF00046;PF02183)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00018051ctg003_21458-27927' '(at1g70510 : 166.0) A member of class I knotted1-like homeobox gene family (together with KNAT1). Similar to the knotted1 (kn1) homeobox gene of maize. KNAT2 acts synergistically with cytokinins and antagonistically with ethylene based on ectopic expression studies in different mutant backgrounds and hormone treatments. In addition, KNAT2 is negatively regulated by AS and YABBY genes. KNAT2 is strongly expressed in the shoot apex of seedlings, while in mature plants the gene is primarily expressed in flowers and inflorescence stems.; KNOTTED-like from Arabidopsis thaliana 2 (KNAT2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to ethylene stimulus, cytokinin mediated signaling pathway, specification of carpel identity; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 6 (TAIR:AT1G23380.1); Has 6101 Blast hits to 6101 proteins in 374 species: Archae - 0; Bacteria - 0; Metazoa - 1779; Fungi - 271; Plants - 3894; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (p46608|hsbh1_soybn : 128.0) Homeobox protein SBH1 - Glycine max (Soybean) & (gnl|cdd|67408 : 86.8) no description available & (reliability: 332.0) & (original description: Putative ina, Description = Homeobox protein knotted-1-like 1, PFAM = PF03789;PF03791;PF03790)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00018084ctg007_1372-8916' '(at5g25220 : 468.0) A member of class II knotted1-like homeobox gene family (together with KNAT4 and KNAT5). Expressed in: hypocotyl-root boundary, anther-filament junction in flowers, ovule-funiculus and peduncle-silique boundaries, petioles and root. Light-regulated expression with differential response to red/far-red light. KNAT3 promoter activity showed cell-type specific pattern along longitudinal root axis, restricted mainly to the differentiation zone of the root, namely in the cortex and pericycle. Not detected in lateral root primordia; KNOTTED1-like homeobox gene 3 (KNAT3); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to light stimulus, detection of cytokinin stimulus, cellular response to cytokine stimulus; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 35 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ELK (InterPro:IPR005539), KNOX1 (InterPro:IPR005540), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), KNOX2 (InterPro:IPR005541), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 4 (TAIR:AT5G11060.1); Has 6026 Blast hits to 5994 proteins in 341 species: Archae - 0; Bacteria - 2; Metazoa - 2058; Fungi - 371; Plants - 3387; Viruses - 4; Other Eukaryotes - 204 (source: NCBI BLink). & (o04136|knap3_maldo : 447.0) Homeobox protein knotted-1-like 3 (KNAP3) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|35992 : 167.0) no description available & (reliability: 936.0) & (original description: Putative KNAT3, Description = Homeobox protein knotted-1-like 3, PFAM = PF05920;PF03789;PF03790;PF03791)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00018817ctg000_1211-4882' '(at3g01470 : 133.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.; homeobox 1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress, response to blue light, positive regulation of transcription, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 12515 Blast hits to 12478 proteins in 547 species: Archae - 0; Bacteria - 0; Metazoa - 9969; Fungi - 258; Plants - 2039; Viruses - 5; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|35704 : 109.0) no description available & (reliability: 266.0) & (original description: Putative hdz10, Description = Homeobox-leucine zipper protein HAT5, PFAM = PF02183;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00019720ctg005_56223-60376' '(at3g01470 : 134.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.; homeobox 1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress, response to blue light, positive regulation of transcription, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 12515 Blast hits to 12478 proteins in 547 species: Archae - 0; Bacteria - 0; Metazoa - 9969; Fungi - 258; Plants - 2039; Viruses - 5; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|35704 : 110.0) no description available & (reliability: 268.0) & (original description: Putative HD12, Description = HD domain class transcription factor, PFAM = PF00046;PF02183)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00028751ctg007_5993-9113' '(at3g03660 : 206.0) Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box.; WUSCHEL related homeobox 11 (WOX11); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 12 (TAIR:AT5G17810.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative WOX11, Description = WUSCHEL-related homeobox 11, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00029951ctg005_1-14619' '(at1g23380 : 247.0) homeodomain transcription factor KNAT6, belonging to class I of KN transcription factor family (which also includes KNAT1 and KNAT2). Expression is increased in as and bop1 leaf mutants.; KNOTTED1-like homeobox gene 6 (KNAT6); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: meristem maintenance; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED-like from Arabidopsis thaliana 2 (TAIR:AT1G70510.1); Has 6018 Blast hits to 6018 proteins in 364 species: Archae - 0; Bacteria - 0; Metazoa - 1717; Fungi - 270; Plants - 3877; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink). & (p46609|osh1_orysa : 200.0) Homeobox protein OSH1 - Oryza sativa (Rice) & (gnl|cdd|35992 : 123.0) no description available & (reliability: 494.0) & (original description: Putative NTH9, Description = Homeobox 9, PFAM = PF03790;PF05920;PF03789;PF03791)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00031055ctg007_6791-10173' '(at1g69780 : 170.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; ATHB13; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cotyledon morphogenesis, regulation of transcription, DNA-dependent, response to sucrose stimulus, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT1G26960.1); Has 11763 Blast hits to 11710 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9272; Fungi - 193; Plants - 2061; Viruses - 5; Other Eukaryotes - 232 (source: NCBI BLink). & (gnl|cdd|35704 : 103.0) no description available & (reliability: 340.0) & (original description: Putative hdz10, Description = Homeobox-leucine zipper protein HOX21, PFAM = PF02183;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00035059ctg002_3747-18263' '(at1g28420 : 1044.0) homeobox-1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), Homeobox (InterPro:IPR001356), DDT domain (InterPro:IPR004022), DDT domain, subgroup (InterPro:IPR018500), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G44180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2088.0) & (original description: Putative hox7, Description = Homeobox transcription factor Hox7, PFAM = PF05066;PF15613;PF02791;PF15612;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00037065ctg005_898-5346' '(at3g60390 : 205.0) Encodes homeobox protein HAT3.; homeobox-leucine zipper protein 3 (HAT3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, transcription, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: HD-ZIP protein, N-terminal (InterPro:IPR006712), Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-leucine zipper protein 4 (TAIR:AT2G44910.1); Has 9598 Blast hits to 9528 proteins in 546 species: Archae - 0; Bacteria - 0; Metazoa - 7082; Fungi - 271; Plants - 2066; Viruses - 4; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|35704 : 147.0) no description available & (reliability: 410.0) & (original description: Putative HAT1, Description = Homeobox-leucine zipper protein HAT1, PFAM = PF04618;PF00046;PF02183)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00038539ctg001_1-2983' '(at2g28610 : 91.3) Encodes a homeodomain containing protein that regulates lateral axis-dependent development of Arabidopsis flowers and is required for cell proliferation. It is expressed in a restricted number of L1 cells at the lateral regions of flower primordia, floral organ primordia, and young leaf primordia.; PRESSED FLOWER (PRS); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 1 (TAIR:AT3G18010.1); Has 1413 Blast hits to 1080 proteins in 151 species: Archae - 0; Bacteria - 53; Metazoa - 299; Fungi - 18; Plants - 657; Viruses - 6; Other Eukaryotes - 380 (source: NCBI BLink). & (q8w0f1|wox5_orysa : 90.5) WUSCHEL-related homeobox 5 (Quiescent-specific homeobox) - Oryza sativa (Rice) & (reliability: 182.6) & (original description: Putative ns1, Description = WUSCHEL-related homeobox 3B, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00039239ctg004_1-7667' '(at1g05230 : 934.0) Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. Mutants have trichomes that appear glass-like under a dissecting microscope as compared to the wild-type trichomes. The mutations do not affect trichome growth or branch number.; homeodomain GLABROUS 2 (HDG2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, trichome morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 32 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: protodermal factor 2 (TAIR:AT4G04890.1). & (gnl|cdd|29139 : 209.0) no description available & (reliability: 1868.0) & (original description: Putative HDG2, Description = Homeobox-leucine zipper protein HDG2, PFAM = PF01852;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00046273ctg002_1-6030' '(at5g41410 : 351.0) Homeodomain protein required for ovule identity.Loss of function mutations show homeotic conversion of integuments to carpels.Forms heterodimers with STM and KNAT1. Interacts with AG-SEP heterodimers is thought to restrict WUS expression. BEL interacts with MADS box dimers composed of SEP1(or SEP3) and AG, SHP1, SHP2 and STK. The interaction of BEL1 with AG-SEP3 is required for proper integument development and specification of integument identity.; BELL 1 (BEL1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 4 (TAIR:AT2G23760.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35992 : 187.0) no description available & (gnl|cdd|70974 : 152.0) no description available & (reliability: 702.0) & (original description: Putative BEL1, Description = Homeobox protein BEL1 homolog, PFAM = PF05920;PF07526)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00046567ctg001_359-4656' '(at1g69780 : 298.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; ATHB13; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cotyledon morphogenesis, regulation of transcription, DNA-dependent, response to sucrose stimulus, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT1G26960.1); Has 11763 Blast hits to 11710 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9272; Fungi - 193; Plants - 2061; Viruses - 5; Other Eukaryotes - 232 (source: NCBI BLink). & (gnl|cdd|35704 : 142.0) no description available & (reliability: 596.0) & (original description: Putative HAT7, Description = Homeobox-leucine zipper protein HOX21, PFAM = PF02183;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00053320ctg000_1819-10072' '(at4g00730 : 711.0) Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development; ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29139 : 183.0) no description available & (reliability: 1422.0) & (original description: Putative HDG1, Description = Homeobox-leucine zipper protein HDG1, PFAM = PF00046;PF01852)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00054412ctg002_1146-9642' '(at4g03250 : 193.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-1 (TAIR:AT1G28420.1); Has 665 Blast hits to 657 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 482; Fungi - 17; Plants - 151; Viruses - 3; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 386.0) & (original description: Putative PGSC0003DMG400031247, Description = Homeobox protein NANOG, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben044scf00058026ctg000_1-8143' '(at5g02030 : 243.0) Mutant has additional lateral organs and phyllotaxy defect. Encodes a homeodomain transcription factor. Has sequence similarity to the Arabidopsis ovule development regulator Bell1. Binds directly to the AGAMOUS cis-regulatory element. Its localization to the nucleus is dependent on the coexpression of either STM or BP.; REPLUMLESS (RPL); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 8 (TAIR:AT2G27990.1); Has 5109 Blast hits to 5109 proteins in 341 species: Archae - 0; Bacteria - 2; Metazoa - 2052; Fungi - 344; Plants - 2481; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|70974 : 134.0) no description available & (gnl|cdd|35992 : 124.0) no description available & (reliability: 486.0) & (original description: Putative qSH1, Description = BEL1-like homeodomain protein 9, PFAM = PF05920;PF07526)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf00013_121484-130888' '(at1g52150 : 1384.0) Member of the class III HD-ZIP protein family. Contains homeodomain and leucine zipper domain. Critical for vascular development and negatively regulates vascular cell differentiation.; ATHB-15; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), MEKHLA (InterPro:IPR013978), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox gene 8 (TAIR:AT4G32880.1); Has 3126 Blast hits to 3055 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 767; Fungi - 91; Plants - 2233; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|87593 : 228.0) no description available & (reliability: 2768.0) & (original description: Putative hb3, Description = Class III homeodomain leucine zipper protein, PFAM = PF00046;PF08670;PF01852)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf00165_568746-575437' '(at2g35940 : 278.0) Encodes a member of the BEL-like homeodomain protein family. Ecotopic expression in the embryo sac leads to defects in nuclear migration and cellularization and embryo sacs with multiple egg cells. Loss of function alleles have no female gametophyte defects. The ecotopic expression phenotype requires KNAT3 because it can be suppressed by loss of KNAT3 function alleles. Localized to the nucleus but interaction with OFP1 relocates it to the cytoplasm.; BEL1-like homeodomain 1 (BLH1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 6 (TAIR:AT4G34610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35992 : 182.0) no description available & (gnl|cdd|70974 : 162.0) no description available & (reliability: 556.0) & (original description: Putative BL2, Description = Bell-like homeodomain protein 2, PFAM = PF05920;PF07526)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf00170_30352-33897' '(at2g28610 : 125.0) Encodes a homeodomain containing protein that regulates lateral axis-dependent development of Arabidopsis flowers and is required for cell proliferation. It is expressed in a restricted number of L1 cells at the lateral regions of flower primordia, floral organ primordia, and young leaf primordia.; PRESSED FLOWER (PRS); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 1 (TAIR:AT3G18010.1); Has 1413 Blast hits to 1080 proteins in 151 species: Archae - 0; Bacteria - 53; Metazoa - 299; Fungi - 18; Plants - 657; Viruses - 6; Other Eukaryotes - 380 (source: NCBI BLink). & (q6s3i3|wox3b_maize : 104.0) WUSCHEL-related homeobox 3B (Narrow sheath protein 2) - Zea mays (Maize) & (reliability: 250.0) & (original description: Putative wox3, Description = Putative wuschel homeobox protein WOX3, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf00170_244197-247360' '(at2g28610 : 100.0) Encodes a homeodomain containing protein that regulates lateral axis-dependent development of Arabidopsis flowers and is required for cell proliferation. It is expressed in a restricted number of L1 cells at the lateral regions of flower primordia, floral organ primordia, and young leaf primordia.; PRESSED FLOWER (PRS); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 1 (TAIR:AT3G18010.1); Has 1413 Blast hits to 1080 proteins in 151 species: Archae - 0; Bacteria - 53; Metazoa - 299; Fungi - 18; Plants - 657; Viruses - 6; Other Eukaryotes - 380 (source: NCBI BLink). & (q8w0f1|wox5_orysa : 90.9) WUSCHEL-related homeobox 5 (Quiescent-specific homeobox) - Oryza sativa (Rice) & (reliability: 200.0) & (original description: Putative wox3, Description = WUSCHEL-related homeobox 1, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf00254_546888-553329' '(at5g41410 : 348.0) Homeodomain protein required for ovule identity.Loss of function mutations show homeotic conversion of integuments to carpels.Forms heterodimers with STM and KNAT1. Interacts with AG-SEP heterodimers is thought to restrict WUS expression. BEL interacts with MADS box dimers composed of SEP1(or SEP3) and AG, SHP1, SHP2 and STK. The interaction of BEL1 with AG-SEP3 is required for proper integument development and specification of integument identity.; BELL 1 (BEL1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 4 (TAIR:AT2G23760.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35992 : 189.0) no description available & (gnl|cdd|70974 : 153.0) no description available & (reliability: 696.0) & (original description: Putative BnaCnng11290D, Description = BnaCnng11290D protein, PFAM = PF07526;PF05920)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf00299_43101-49272' '(at4g03250 : 208.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-1 (TAIR:AT1G28420.1); Has 665 Blast hits to 657 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 482; Fungi - 17; Plants - 151; Viruses - 3; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 416.0) & (original description: Putative TCM_040945, Description = Homeodomain-like superfamily protein, putative isoform 1, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf00332_919851-927606' '(at1g70510 : 225.0) A member of class I knotted1-like homeobox gene family (together with KNAT1). Similar to the knotted1 (kn1) homeobox gene of maize. KNAT2 acts synergistically with cytokinins and antagonistically with ethylene based on ectopic expression studies in different mutant backgrounds and hormone treatments. In addition, KNAT2 is negatively regulated by AS and YABBY genes. KNAT2 is strongly expressed in the shoot apex of seedlings, while in mature plants the gene is primarily expressed in flowers and inflorescence stems.; KNOTTED-like from Arabidopsis thaliana 2 (KNAT2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to ethylene stimulus, cytokinin mediated signaling pathway, specification of carpel identity; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 6 (TAIR:AT1G23380.1); Has 6101 Blast hits to 6101 proteins in 374 species: Archae - 0; Bacteria - 0; Metazoa - 1779; Fungi - 271; Plants - 3894; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (q41853|rsh1_maize : 192.0) Homeobox protein rough sheath 1 - Zea mays (Maize) & (gnl|cdd|35992 : 121.0) no description available & (gnl|cdd|67408 : 89.1) no description available & (reliability: 450.0) & (original description: Putative kn1, Description = Knotted 1, PFAM = PF03790;PF03791;PF05920;PF03789)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf00650_638816-643186' '(at1g23380 : 153.0) homeodomain transcription factor KNAT6, belonging to class I of KN transcription factor family (which also includes KNAT1 and KNAT2). Expression is increased in as and bop1 leaf mutants.; KNOTTED1-like homeobox gene 6 (KNAT6); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: meristem maintenance; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED-like from Arabidopsis thaliana 2 (TAIR:AT1G70510.1); Has 6018 Blast hits to 6018 proteins in 364 species: Archae - 0; Bacteria - 0; Metazoa - 1717; Fungi - 270; Plants - 3877; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink). & (p46608|hsbh1_soybn : 124.0) Homeobox protein SBH1 - Glycine max (Soybean) & (gnl|cdd|35992 : 96.6) no description available & (reliability: 306.0) & (original description: Putative kn4, Description = Knotted 4, PFAM = PF03789;PF05920)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf00703_73167-81720' '(at4g21750 : 1160.0) Encodes a homeobox protein similar to GL2. It is expressed in both the apical and basal daughter cells of the zygote as well as their progeny. Expression is detected starting the two-celled stage of embryo development and is later restricted to the outermost, epidermal cell layer from its inception. Its promoter is highly modular with each region contributing to specific aspects of the gene's spatial and temporal expression. Double mutant analysis with PDF2, another L1-specific gene, suggests that their functions are partially redundant and the absence of both of the genes result in abnormal shoot development.; MERISTEM LAYER 1 (ATML1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: epidermal cell differentiation, regulation of transcription, DNA-dependent, cotyledon development; LOCATED IN: nucleus; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: protodermal factor 2 (TAIR:AT4G04890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29139 : 216.0) no description available & (reliability: 2320.0) & (original description: Putative ATML1, Description = Homeobox-leucine zipper protein MERISTEM L1, PFAM = PF00046;PF01852)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf00830_320598-323679' '(at2g22800 : 139.0) Encodes homeobox protein HAT9.; HAT9; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein family (TAIR:AT4G37790.1); Has 6755 Blast hits to 6732 proteins in 464 species: Archae - 0; Bacteria - 0; Metazoa - 4333; Fungi - 266; Plants - 2037; Viruses - 7; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|35704 : 102.0) no description available & (reliability: 278.0) & (original description: Putative HAT4, Description = Homeobox associated leucine zipper protein, PFAM = PF02183;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01078_77832-89290' '(at1g70510 : 249.0) A member of class I knotted1-like homeobox gene family (together with KNAT1). Similar to the knotted1 (kn1) homeobox gene of maize. KNAT2 acts synergistically with cytokinins and antagonistically with ethylene based on ectopic expression studies in different mutant backgrounds and hormone treatments. In addition, KNAT2 is negatively regulated by AS and YABBY genes. KNAT2 is strongly expressed in the shoot apex of seedlings, while in mature plants the gene is primarily expressed in flowers and inflorescence stems.; KNOTTED-like from Arabidopsis thaliana 2 (KNAT2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to ethylene stimulus, cytokinin mediated signaling pathway, specification of carpel identity; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 6 (TAIR:AT1G23380.1); Has 6101 Blast hits to 6101 proteins in 374 species: Archae - 0; Bacteria - 0; Metazoa - 1779; Fungi - 271; Plants - 3894; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (p46609|osh1_orysa : 204.0) Homeobox protein OSH1 - Oryza sativa (Rice) & (gnl|cdd|35992 : 129.0) no description available & (reliability: 498.0) & (original description: Putative KNAT6, Description = Homeobox protein knotted-1-like 6, PFAM = PF05920;PF03791;PF03789;PF03790)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01154_881107-884286' '(at2g28610 : 107.0) Encodes a homeodomain containing protein that regulates lateral axis-dependent development of Arabidopsis flowers and is required for cell proliferation. It is expressed in a restricted number of L1 cells at the lateral regions of flower primordia, floral organ primordia, and young leaf primordia.; PRESSED FLOWER (PRS); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 1 (TAIR:AT3G18010.1); Has 1413 Blast hits to 1080 proteins in 151 species: Archae - 0; Bacteria - 53; Metazoa - 299; Fungi - 18; Plants - 657; Viruses - 6; Other Eukaryotes - 380 (source: NCBI BLink). & (q8w0f1|wox5_orysa : 94.7) WUSCHEL-related homeobox 5 (Quiescent-specific homeobox) - Oryza sativa (Rice) & (reliability: 214.0) & (original description: Putative ns1, Description = WUSCHEL-related homeobox 1, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01154_1098511-1102245' '(at2g28610 : 129.0) Encodes a homeodomain containing protein that regulates lateral axis-dependent development of Arabidopsis flowers and is required for cell proliferation. It is expressed in a restricted number of L1 cells at the lateral regions of flower primordia, floral organ primordia, and young leaf primordia.; PRESSED FLOWER (PRS); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 1 (TAIR:AT3G18010.1); Has 1413 Blast hits to 1080 proteins in 151 species: Archae - 0; Bacteria - 53; Metazoa - 299; Fungi - 18; Plants - 657; Viruses - 6; Other Eukaryotes - 380 (source: NCBI BLink). & (q6s3i3|wox3b_maize : 103.0) WUSCHEL-related homeobox 3B (Narrow sheath protein 2) - Zea mays (Maize) & (reliability: 258.0) & (original description: Putative wox3, Description = Putative wuschel homeobox protein WOX3, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01189_154970-162721' '(at4g36870 : 375.0) Encodes a member of the BEL family of homeodomain proteins. Plants doubly mutant for saw1/saw2 (blh2/blh4) have serrated leaves. BP is expressed in the serrated leaves, therefore saw1/saw1 may act redundantly to repress BP in leaves.; BEL1-like homeodomain 2 (BLH2); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 4 (TAIR:AT2G23760.3); Has 5744 Blast hits to 5713 proteins in 356 species: Archae - 0; Bacteria - 3; Metazoa - 2532; Fungi - 390; Plants - 2517; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). & (gnl|cdd|47873 : 197.0) no description available & (gnl|cdd|35992 : 181.0) no description available & (reliability: 750.0) & (original description: Putative Mdh1, Description = Homeodomain protein, PFAM = PF05920;PF07526)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01213_136219-144096' '(at5g25220 : 463.0) A member of class II knotted1-like homeobox gene family (together with KNAT4 and KNAT5). Expressed in: hypocotyl-root boundary, anther-filament junction in flowers, ovule-funiculus and peduncle-silique boundaries, petioles and root. Light-regulated expression with differential response to red/far-red light. KNAT3 promoter activity showed cell-type specific pattern along longitudinal root axis, restricted mainly to the differentiation zone of the root, namely in the cortex and pericycle. Not detected in lateral root primordia; KNOTTED1-like homeobox gene 3 (KNAT3); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to light stimulus, detection of cytokinin stimulus, cellular response to cytokine stimulus; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 35 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ELK (InterPro:IPR005539), KNOX1 (InterPro:IPR005540), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), KNOX2 (InterPro:IPR005541), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 4 (TAIR:AT5G11060.1); Has 6026 Blast hits to 5994 proteins in 341 species: Archae - 0; Bacteria - 2; Metazoa - 2058; Fungi - 371; Plants - 3387; Viruses - 4; Other Eukaryotes - 204 (source: NCBI BLink). & (o04136|knap3_maldo : 449.0) Homeobox protein knotted-1-like 3 (KNAP3) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|35992 : 167.0) no description available & (reliability: 926.0) & (original description: Putative KNAT3, Description = Homeobox protein knotted-1-like 3, PFAM = PF05920;PF03790;PF03789;PF03791)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01222_172902-185051' '(at2g01430 : 182.0) homeobox-leucine zipper protein 17 (HB17); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-leucine zipper protein 18 (TAIR:AT1G70920.1); Has 8030 Blast hits to 8017 proteins in 519 species: Archae - 0; Bacteria - 0; Metazoa - 5631; Fungi - 276; Plants - 1985; Viruses - 4; Other Eukaryotes - 134 (source: NCBI BLink). & (gnl|cdd|35704 : 122.0) no description available & (reliability: 364.0) & (original description: Putative HOX3, Description = Homeobox-leucine zipper protein HOX3, PFAM = PF02183;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01337_335142-338099' '(at3g11260 : 144.0) Arabidopsis thaliana WOX5 protein mRNA; WUSCHEL related homeobox 5 (WOX5); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 7 (TAIR:AT5G05770.1); Has 538 Blast hits to 538 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 538; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8w0f1|wox5_orysa : 118.0) WUSCHEL-related homeobox 5 (Quiescent-specific homeobox) - Oryza sativa (Rice) & (reliability: 288.0) & (original description: Putative WOX5, Description = WUSCHEL-related homeobox 5, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01362_329892-334322' '(at5g15150 : 178.0) homeobox-containing gene with an unusual feature: a leucine zipper motif adjacent to the carboxyl-terminal of the homeodomain structure. This gene is expressed primarily in the cortex of the root and the stem.; homeobox 3 (HB-3); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 20 (TAIR:AT3G01220.1); Has 11268 Blast hits to 11217 proteins in 570 species: Archae - 0; Bacteria - 6; Metazoa - 8826; Fungi - 177; Plants - 2030; Viruses - 5; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|35704 : 123.0) no description available & (reliability: 356.0) & (original description: Putative hdz10, Description = Homeobox-leucine zipper protein HOX21, PFAM = PF02183;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01374_753812-762859' '(at1g52150 : 1450.0) Member of the class III HD-ZIP protein family. Contains homeodomain and leucine zipper domain. Critical for vascular development and negatively regulates vascular cell differentiation.; ATHB-15; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), MEKHLA (InterPro:IPR013978), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox gene 8 (TAIR:AT4G32880.1); Has 3126 Blast hits to 3055 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 767; Fungi - 91; Plants - 2233; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|87593 : 228.0) no description available & (reliability: 2900.0) & (original description: Putative hb3, Description = Class III homeodomain leucine zipper protein, PFAM = PF00046;PF08670;PF01852)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01490_7112-13123' '(at4g36870 : 321.0) Encodes a member of the BEL family of homeodomain proteins. Plants doubly mutant for saw1/saw2 (blh2/blh4) have serrated leaves. BP is expressed in the serrated leaves, therefore saw1/saw1 may act redundantly to repress BP in leaves.; BEL1-like homeodomain 2 (BLH2); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 4 (TAIR:AT2G23760.3); Has 5744 Blast hits to 5713 proteins in 356 species: Archae - 0; Bacteria - 3; Metazoa - 2532; Fungi - 390; Plants - 2517; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). & (gnl|cdd|35992 : 175.0) no description available & (gnl|cdd|70974 : 105.0) no description available & (reliability: 642.0) & (original description: Putative BEL1, Description = BEL1-like homeodomain protein 1, PFAM = PF05920;PF07526)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01521_1684916-1698628' '(at1g69780 : 199.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; ATHB13; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cotyledon morphogenesis, regulation of transcription, DNA-dependent, response to sucrose stimulus, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT1G26960.1); Has 11763 Blast hits to 11710 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9272; Fungi - 193; Plants - 2061; Viruses - 5; Other Eukaryotes - 232 (source: NCBI BLink). & (gnl|cdd|35704 : 108.0) no description available & (reliability: 398.0) & (original description: Putative HAT5, Description = Homeobox-leucine zipper protein HOX21, PFAM = PF02183;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01611_51870-60741' '(at1g52150 : 1351.0) Member of the class III HD-ZIP protein family. Contains homeodomain and leucine zipper domain. Critical for vascular development and negatively regulates vascular cell differentiation.; ATHB-15; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), MEKHLA (InterPro:IPR013978), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox gene 8 (TAIR:AT4G32880.1); Has 3126 Blast hits to 3055 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 767; Fungi - 91; Plants - 2233; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|87593 : 238.0) no description available & (reliability: 2702.0) & (original description: Putative hb3, Description = Class III homeodomain leucine zipper protein, PFAM = PF00046;PF01852;PF08670)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01701_1351988-1355818' '(at1g75430 : 263.0) BEL1-like homeodomain 11 (BLH11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: ovule, pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 7 (TAIR:AT2G16400.1); Has 5131 Blast hits to 5128 proteins in 338 species: Archae - 0; Bacteria - 0; Metazoa - 2154; Fungi - 324; Plants - 2471; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (gnl|cdd|35992 : 160.0) no description available & (gnl|cdd|70974 : 147.0) no description available & (reliability: 526.0) & (original description: Putative BLH11, Description = BEL1-like homeodomain protein 11, PFAM = PF07526;PF05920)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01727_290757-294685' '(at5g15150 : 162.0) homeobox-containing gene with an unusual feature: a leucine zipper motif adjacent to the carboxyl-terminal of the homeodomain structure. This gene is expressed primarily in the cortex of the root and the stem.; homeobox 3 (HB-3); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 20 (TAIR:AT3G01220.1); Has 11268 Blast hits to 11217 proteins in 570 species: Archae - 0; Bacteria - 6; Metazoa - 8826; Fungi - 177; Plants - 2030; Viruses - 5; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|35704 : 121.0) no description available & (reliability: 324.0) & (original description: Putative hdz10, Description = Homeobox-leucine zipper protein HOX21, PFAM = PF00046;PF02183)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01750_832616-838102' '(at2g35940 : 285.0) Encodes a member of the BEL-like homeodomain protein family. Ecotopic expression in the embryo sac leads to defects in nuclear migration and cellularization and embryo sacs with multiple egg cells. Loss of function alleles have no female gametophyte defects. The ecotopic expression phenotype requires KNAT3 because it can be suppressed by loss of KNAT3 function alleles. Localized to the nucleus but interaction with OFP1 relocates it to the cytoplasm.; BEL1-like homeodomain 1 (BLH1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 6 (TAIR:AT4G34610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35992 : 182.0) no description available & (gnl|cdd|70974 : 159.0) no description available & (reliability: 570.0) & (original description: Putative BL2, Description = Bell-like homeodomain protein 2, PFAM = PF05920;PF07526)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf01953_129743-132508' '(at2g46680 : 112.0) encodes a putative transcription factor that contains a homeodomain closely linked to a leucine zipper motif. Transcript is detected in all tissues examined. Is transcriptionally regulated in an ABA-dependent manner and may act in a signal transduction pathway which mediates a drought response.; homeobox 7 (HB-7); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to water deprivation, abscisic acid mediated signaling pathway, regulation of transcription, DNA-dependent, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox 12 (TAIR:AT3G61890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35704 : 94.1) no description available & (reliability: 224.0) & (original description: Putative HB1, Description = Homeobox-leucine zipper protein 1, PFAM = PF00046;PF02183)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02029_225601-235415' '(at4g36870 : 359.0) Encodes a member of the BEL family of homeodomain proteins. Plants doubly mutant for saw1/saw2 (blh2/blh4) have serrated leaves. BP is expressed in the serrated leaves, therefore saw1/saw1 may act redundantly to repress BP in leaves.; BEL1-like homeodomain 2 (BLH2); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 4 (TAIR:AT2G23760.3); Has 5744 Blast hits to 5713 proteins in 356 species: Archae - 0; Bacteria - 3; Metazoa - 2532; Fungi - 390; Plants - 2517; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). & (gnl|cdd|35992 : 191.0) no description available & (gnl|cdd|47873 : 177.0) no description available & (reliability: 718.0) & (original description: Putative Bel22, Description = BEL1-related homeotic protein 22, PFAM = PF05920;PF07526)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02108_62531-67787' '(at1g73360 : 856.0) Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. It is involved in trichome branching.; homeodomain GLABROUS 11 (HDG11); CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 12 (TAIR:AT1G17920.1); Has 12070 Blast hits to 11936 proteins in 534 species: Archae - 0; Bacteria - 0; Metazoa - 9179; Fungi - 319; Plants - 2364; Viruses - 8; Other Eukaryotes - 200 (source: NCBI BLink). & (gnl|cdd|29139 : 173.0) no description available & (reliability: 1712.0) & (original description: Putative HDG11, Description = Homeobox-leucine zipper protein HDG11, PFAM = PF00046;PF01852)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02145_279185-286775' '(p46608|hsbh1_soybn : 408.0) Homeobox protein SBH1 - Glycine max (Soybean) & (at1g62360 : 390.0) Class I knotted-like homeodomain protein that is required for shoot apical meristem (SAM) formation during embryogenesis and for SAM function throughout the lifetime of the plant. Functions by preventing incorporation of cells in the meristem center into differentiating organ primordia.; SHOOT MERISTEMLESS (STM); CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED-like from Arabidopsis thaliana (TAIR:AT4G08150.1); Has 6066 Blast hits to 6064 proteins in 384 species: Archae - 0; Bacteria - 0; Metazoa - 1706; Fungi - 298; Plants - 3900; Viruses - 0; Other Eukaryotes - 162 (source: NCBI BLink). & (gnl|cdd|35992 : 142.0) no description available & (gnl|cdd|67408 : 85.7) no description available & (reliability: 780.0) & (original description: Putative ina, Description = Invaginata, PFAM = PF05920;PF03790;PF03791;PF03789)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02217_832422-840371' '(at3g18380 : 204.0) sequence-specific DNA binding transcription factors;sequence-specific DNA binding; FUNCTIONS IN: sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15215.2). & (reliability: 408.0) & (original description: Putative SHH1, Description = Protein SAWADEE HOMEODOMAIN HOMOLOG 1, PFAM = PF16719)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02287_233776-236655' '(at2g46680 : 108.0) encodes a putative transcription factor that contains a homeodomain closely linked to a leucine zipper motif. Transcript is detected in all tissues examined. Is transcriptionally regulated in an ABA-dependent manner and may act in a signal transduction pathway which mediates a drought response.; homeobox 7 (HB-7); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to water deprivation, abscisic acid mediated signaling pathway, regulation of transcription, DNA-dependent, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox 12 (TAIR:AT3G61890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35704 : 90.2) no description available & (reliability: 216.0) & (original description: Putative HB12, Description = Homeobox 12, PFAM = PF02183;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02340_621201-624363' '(at1g52150 : 108.0) Member of the class III HD-ZIP protein family. Contains homeodomain and leucine zipper domain. Critical for vascular development and negatively regulates vascular cell differentiation.; ATHB-15; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), MEKHLA (InterPro:IPR013978), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox gene 8 (TAIR:AT4G32880.1); Has 3126 Blast hits to 3055 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 767; Fungi - 91; Plants - 2233; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative hb3, Description = Homeobox-leucine zipper protein ATHB-15, PFAM = )' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02366_458489-463765' '(at4g36740 : 172.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; homeobox protein 40 (HB40); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: ovule, fruit, root, flower; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 21 (TAIR:AT2G18550.1); Has 8534 Blast hits to 8531 proteins in 458 species: Archae - 0; Bacteria - 0; Metazoa - 6212; Fungi - 217; Plants - 1981; Viruses - 4; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|35704 : 114.0) no description available & (reliability: 344.0) & (original description: Putative gt1, Description = Grassy tillers 1, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02369_28305-32850' '(at2g28610 : 104.0) Encodes a homeodomain containing protein that regulates lateral axis-dependent development of Arabidopsis flowers and is required for cell proliferation. It is expressed in a restricted number of L1 cells at the lateral regions of flower primordia, floral organ primordia, and young leaf primordia.; PRESSED FLOWER (PRS); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 1 (TAIR:AT3G18010.1); Has 1413 Blast hits to 1080 proteins in 151 species: Archae - 0; Bacteria - 53; Metazoa - 299; Fungi - 18; Plants - 657; Viruses - 6; Other Eukaryotes - 380 (source: NCBI BLink). & (q6s3i3|wox3b_maize : 89.4) WUSCHEL-related homeobox 3B (Narrow sheath protein 2) - Zea mays (Maize) & (reliability: 208.0) & (original description: Putative wox3, Description = Putative wuschel homeobox protein WOX3, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02395_431119-444244' '(at1g73360 : 490.0) Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. It is involved in trichome branching.; homeodomain GLABROUS 11 (HDG11); CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 12 (TAIR:AT1G17920.1); Has 12070 Blast hits to 11936 proteins in 534 species: Archae - 0; Bacteria - 0; Metazoa - 9179; Fungi - 319; Plants - 2364; Viruses - 8; Other Eukaryotes - 200 (source: NCBI BLink). & (gnl|cdd|29139 : 143.0) no description available & (reliability: 980.0) & (original description: Putative BnaA02g03520D, Description = BnaA02g03520D protein, PFAM = PF01852;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02436_367629-381642' '(at5g46880 : 764.0) homeobox-7 (HB-7); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 4 (TAIR:AT4G17710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29139 : 178.0) no description available & (reliability: 1528.0) & (original description: Putative ROC3, Description = Homeobox-leucine zipper protein ROC3, PFAM = PF01852;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02439_52721-56728' '(at3g01470 : 130.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.; homeobox 1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress, response to blue light, positive regulation of transcription, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 12515 Blast hits to 12478 proteins in 547 species: Archae - 0; Bacteria - 0; Metazoa - 9969; Fungi - 258; Plants - 2039; Viruses - 5; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|35704 : 110.0) no description available & (reliability: 260.0) & (original description: Putative HD12, Description = HD domain class transcription factor, PFAM = PF02183;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02439_104871-108124' '(at1g27050 : 149.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; homeobox protein 54 (HB54); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); Has 5308 Blast hits to 5298 proteins in 368 species: Archae - 2; Bacteria - 4; Metazoa - 3484; Fungi - 119; Plants - 1607; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative At1g27050, Description = Uncharacterized protein At1g27050, PFAM = PF00076)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02465_83174-99320' '(at1g62990 : 427.0) Encodes a homeodomain transcription factor of the Knotted family. May be involved in secondary cell wall biosynthesis. Mutants have moderately irregular xylem development. Expression of this gene is upregulated by SND1 and MYB46.; KNOTTED-like homeobox of Arabidopsis thaliana 7 (KNAT7); CONTAINS InterPro DOMAIN/s: ELK (InterPro:IPR005539), KNOX1 (InterPro:IPR005540), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), KNOX2 (InterPro:IPR005541), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 3 (TAIR:AT5G25220.1); Has 5187 Blast hits to 5186 proteins in 324 species: Archae - 0; Bacteria - 0; Metazoa - 1947; Fungi - 303; Plants - 2774; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink). & (p46606|hd1_brana : 421.0) Homeobox protein HD1 - Brassica napus (Rape) & (gnl|cdd|35992 : 167.0) no description available & (reliability: 854.0) & (original description: Putative KNAT7, Description = Homeobox protein knotted-1-like 7, PFAM = PF03791;PF05920;PF03790)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02537_2167029-2170451' '(at5g65310 : 125.0) Encodes a class I HDZip (homeodomain-leucine zipper) protein that is a positive regulator of ABA-responsiveness, mediating the inhibitory effect of ABA on growth during seedling establishment.; homeobox protein 5 (HB5); FUNCTIONS IN: sequence-specific DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of transcription, abscisic acid mediated signaling pathway, regulation of abscisic acid mediated signaling pathway, regulation of transcription, DNA-dependent, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 10595 Blast hits to 10554 proteins in 566 species: Archae - 0; Bacteria - 4; Metazoa - 8208; Fungi - 200; Plants - 1989; Viruses - 5; Other Eukaryotes - 189 (source: NCBI BLink). & (gnl|cdd|35704 : 102.0) no description available & (reliability: 250.0) & (original description: Putative HD18, Description = HD domain class transcription factor, PFAM = PF02183;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02541_234619-241725' '(at4g04890 : 1122.0) Encodes a homeodomain protein that is expressed in the LI layer of the vegetative, floral and inflorescence meristems. Binds to the L1 box promoter element which is required in some proteins for L1 specific expression.; protodermal factor 2 (PDF2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: epidermal cell differentiation, regulation of transcription, DNA-dependent, cotyledon development; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein (TAIR:AT4G21750.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29139 : 216.0) no description available & (reliability: 2244.0) & (original description: Putative PDF2, Description = Homeobox-leucine zipper protein PROTODERMAL FACTOR 2, PFAM = PF01852;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02563_90382-95095' '(at4g36740 : 178.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; homeobox protein 40 (HB40); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: ovule, fruit, root, flower; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 21 (TAIR:AT2G18550.1); Has 8534 Blast hits to 8531 proteins in 458 species: Archae - 0; Bacteria - 0; Metazoa - 6212; Fungi - 217; Plants - 1981; Viruses - 4; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|35704 : 109.0) no description available & (reliability: 356.0) & (original description: Putative gt1, Description = Homeobox-leucine zipper protein HOX14, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02823_415947-423953' '(o04135|knap2_maldo : 409.0) Homeobox protein knotted-1-like 2 (KNAP2) - Malus domestica (Apple) (Malus sylvestris) & (at4g08150 : 360.0) A member of class I knotted1-like homeobox gene family (together with KNAT2). Similar to the knotted1 (kn1) homeobox gene of maize. Normally expressed in the peripheral and rib zone of shoot apical meristem but not in the leaf primordia. It is also expressed in the fourth floral whorl, in the region that would become style, particularly in the cell surrounding the transmitting tissue. No expression was detected in the first three floral whorls. Expression is repressed by auxin and AS1 which results in the promotion of leaf fate.; KNOTTED-like from Arabidopsis thaliana (KNAT1); CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOX/ELK homeobox transcription factor (TAIR:AT1G62360.1); Has 31270 Blast hits to 14770 proteins in 476 species: Archae - 4; Bacteria - 107; Metazoa - 2529; Fungi - 972; Plants - 3913; Viruses - 2; Other Eukaryotes - 23743 (source: NCBI BLink). & (gnl|cdd|35992 : 141.0) no description available & (gnl|cdd|67408 : 83.4) no description available & (reliability: 720.0) & (original description: Putative KN1, Description = Homeotic protein knotted-1, PFAM = PF03789;PF03790;PF03791;PF05920)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02858_292512-296390' '(at4g16780 : 239.0) Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin.; homeobox protein 2 (HB-2); CONTAINS InterPro DOMAIN/s: HD-ZIP protein, N-terminal (InterPro:IPR006712), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT5G47370.1); Has 7230 Blast hits to 7123 proteins in 465 species: Archae - 0; Bacteria - 0; Metazoa - 4716; Fungi - 327; Plants - 2046; Viruses - 18; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|35704 : 150.0) no description available & (gnl|cdd|68199 : 87.9) no description available & (reliability: 478.0) & (original description: Putative HAT4, Description = Homeobox-leucine zipper protein HAT4, PFAM = PF02183;PF00046;PF04618)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf02990_896897-901625' '(at4g37790 : 233.0) Encodes homeobox protein HAT22, member of the HD-Zip II family.; HAT22; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, response to cytokinin stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein family (TAIR:AT2G22800.1); Has 6652 Blast hits to 6630 proteins in 455 species: Archae - 0; Bacteria - 0; Metazoa - 4237; Fungi - 277; Plants - 2018; Viruses - 3; Other Eukaryotes - 117 (source: NCBI BLink). & (gnl|cdd|35704 : 130.0) no description available & (reliability: 464.0) & (original description: Putative HAT22, Description = Homeobox-leucine zipper protein HAT22, PFAM = PF02183;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf03050_361233-365132' '(at1g75430 : 264.0) BEL1-like homeodomain 11 (BLH11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: ovule, pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 7 (TAIR:AT2G16400.1); Has 5131 Blast hits to 5128 proteins in 338 species: Archae - 0; Bacteria - 0; Metazoa - 2154; Fungi - 324; Plants - 2471; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (gnl|cdd|35992 : 157.0) no description available & (gnl|cdd|70974 : 143.0) no description available & (reliability: 528.0) & (original description: Putative BLH11, Description = BEL1-like homeodomain protein 11, PFAM = PF05920;PF07526)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf03050_367972-374029' '(at4g34610 : 293.0) BEL1-like homeodomain 6 (BLH6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 7 (TAIR:AT2G16400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35992 : 175.0) no description available & (gnl|cdd|70974 : 156.0) no description available & (reliability: 586.0) & (original description: Putative BLH6, Description = BEL1-like homeodomain protein 6, PFAM = PF05920;PF07526)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf03072_84726-88358' '(at2g18550 : 189.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; homeobox protein 21 (HB21); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 40 (TAIR:AT4G36740.1); Has 7525 Blast hits to 7522 proteins in 427 species: Archae - 0; Bacteria - 0; Metazoa - 5302; Fungi - 235; Plants - 1881; Viruses - 3; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|35704 : 115.0) no description available & (reliability: 378.0) & (original description: Putative gt1, Description = Homeobox-leucine zipper protein HAT5, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf03147_280472-288731' '(at5g02030 : 239.0) Mutant has additional lateral organs and phyllotaxy defect. Encodes a homeodomain transcription factor. Has sequence similarity to the Arabidopsis ovule development regulator Bell1. Binds directly to the AGAMOUS cis-regulatory element. Its localization to the nucleus is dependent on the coexpression of either STM or BP.; REPLUMLESS (RPL); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 8 (TAIR:AT2G27990.1); Has 5109 Blast hits to 5109 proteins in 341 species: Archae - 0; Bacteria - 2; Metazoa - 2052; Fungi - 344; Plants - 2481; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|70974 : 136.0) no description available & (gnl|cdd|35992 : 123.0) no description available & (reliability: 478.0) & (original description: Putative qSH1, Description = BEL1-like homeodomain protein 9, PFAM = PF07526;PF05920)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf03169_9079-23359' '(at1g28420 : 1049.0) homeobox-1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), Homeobox (InterPro:IPR001356), DDT domain (InterPro:IPR004022), DDT domain, subgroup (InterPro:IPR018500), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G44180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2098.0) & (original description: Putative RLT1, Description = Homeobox-DDT domain protein RLT1, PFAM = PF05066;PF02791;PF15613;PF00046;PF15612)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf03169_593504-596019' '(gnl|cdd|35704 : 96.0) no description available & (at3g01470 : 90.9) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.; homeobox 1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress, response to blue light, positive regulation of transcription, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 12515 Blast hits to 12478 proteins in 547 species: Archae - 0; Bacteria - 0; Metazoa - 9969; Fungi - 258; Plants - 2039; Viruses - 5; Other Eukaryotes - 244 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative HAT5, Description = Helix-turn-helix motif-containing protein, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf03302_38624-44584' '(at2g27990 : 268.0) Encodes a BEL1-like homeobox gene that functions together with PNY in meristem maintenance by regulating the allocation process during vegetative and reproductive development. Both gene products are required for the competence of the SAM to respond properly to floral inductive signals.; BEL1-like homeodomain 8 (BLH8); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: POX (plant homeobox) family protein (TAIR:AT5G02030.1); Has 5076 Blast hits to 5073 proteins in 336 species: Archae - 0; Bacteria - 0; Metazoa - 2093; Fungi - 319; Plants - 2481; Viruses - 0; Other Eukaryotes - 183 (source: NCBI BLink). & (gnl|cdd|35992 : 168.0) no description available & (gnl|cdd|70974 : 138.0) no description available & (reliability: 536.0) & (original description: Putative qSH1, Description = BEL1-like homeodomain protein 9, PFAM = PF07526;PF05920)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf03362_149093-169018' '(at1g23380 : 326.0) homeodomain transcription factor KNAT6, belonging to class I of KN transcription factor family (which also includes KNAT1 and KNAT2). Expression is increased in as and bop1 leaf mutants.; KNOTTED1-like homeobox gene 6 (KNAT6); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: meristem maintenance; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED-like from Arabidopsis thaliana 2 (TAIR:AT1G70510.1); Has 6018 Blast hits to 6018 proteins in 364 species: Archae - 0; Bacteria - 0; Metazoa - 1717; Fungi - 270; Plants - 3877; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink). & (p46608|hsbh1_soybn : 218.0) Homeobox protein SBH1 - Glycine max (Soybean) & (gnl|cdd|35992 : 123.0) no description available & (gnl|cdd|67408 : 90.7) no description available & (reliability: 652.0) & (original description: Putative KNAT6, Description = Homeobox protein knotted-1-like 6, PFAM = PF03790;PF03789;PF05920;PF03791)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf03385_661779-669843' '(p48786|prh_petcr : 263.0) Pathogenesis-related homeodomain protein (PRHP) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at3g19510 : 236.0) Encodes a member of the PHD-finger homeodomain protein family. The HAT3.1 homeodomain is highly divergent in sequence even at positions that are almost invariable among homeodomains. HAT3.1 shows a preference for the sequence T(A/G)(A/C)ACCA, different from those bound by other homeodomains.; HAT3.1; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of transcription, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: pathogenesis related homeodomain protein A (TAIR:AT4G29940.1); Has 21195 Blast hits to 13195 proteins in 937 species: Archae - 172; Bacteria - 5087; Metazoa - 6772; Fungi - 2621; Plants - 1255; Viruses - 207; Other Eukaryotes - 5081 (source: NCBI BLink). & (gnl|cdd|39500 : 126.0) no description available & (reliability: 472.0) & (original description: Putative PRH, Description = Pathogenesis-related homeodomain protein, PFAM = PF00628;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf03445_88447-91230' '(at1g23380 : 135.0) homeodomain transcription factor KNAT6, belonging to class I of KN transcription factor family (which also includes KNAT1 and KNAT2). Expression is increased in as and bop1 leaf mutants.; KNOTTED1-like homeobox gene 6 (KNAT6); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: meristem maintenance; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED-like from Arabidopsis thaliana 2 (TAIR:AT1G70510.1); Has 6018 Blast hits to 6018 proteins in 364 species: Archae - 0; Bacteria - 0; Metazoa - 1717; Fungi - 270; Plants - 3877; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink). & (q9m6d9|stm_braol : 130.0) Homeobox protein Shootmeristemless - Brassica oleracea (Wild cabbage) & (gnl|cdd|35992 : 96.9) no description available & (reliability: 270.0) & (original description: Putative KN2, Description = Homeobox transcription factor KN2, PFAM = PF05920;PF03789)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf03673_200964-208113' '(at4g35550 : 207.0) Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. WOX13 is the only family member that does not contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box.; WUSCHEL related homeobox 13 (WOX13); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 14 (TAIR:AT1G20700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative WOX8, Description = WUSCHEL-related homeobox 8, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf03689_157266-162083' '(at4g35550 : 230.0) Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. WOX13 is the only family member that does not contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box.; WUSCHEL related homeobox 13 (WOX13); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 14 (TAIR:AT1G20700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative WOX8, Description = WUSCHEL-related homeobox 8, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf03894_348065-351106' '(at2g46680 : 120.0) encodes a putative transcription factor that contains a homeodomain closely linked to a leucine zipper motif. Transcript is detected in all tissues examined. Is transcriptionally regulated in an ABA-dependent manner and may act in a signal transduction pathway which mediates a drought response.; homeobox 7 (HB-7); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to water deprivation, abscisic acid mediated signaling pathway, regulation of transcription, DNA-dependent, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox 12 (TAIR:AT3G61890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35704 : 90.2) no description available & (reliability: 240.0) & (original description: Putative HAT5, Description = Homeobox-leucine zipper protein HAT5, PFAM = PF00046;PF02183)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf04220_26968-39458' '(at1g05230 : 946.0) Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. Mutants have trichomes that appear glass-like under a dissecting microscope as compared to the wild-type trichomes. The mutations do not affect trichome growth or branch number.; homeodomain GLABROUS 2 (HDG2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, trichome morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 32 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: protodermal factor 2 (TAIR:AT4G04890.1). & (gnl|cdd|29139 : 209.0) no description available & (reliability: 1892.0) & (original description: Putative HDG2, Description = Homeobox-leucine zipper protein HDG2, PFAM = PF00046;PF01852)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf04240_232256-238098' '(at4g36740 : 188.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; homeobox protein 40 (HB40); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: ovule, fruit, root, flower; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 21 (TAIR:AT2G18550.1); Has 8534 Blast hits to 8531 proteins in 458 species: Archae - 0; Bacteria - 0; Metazoa - 6212; Fungi - 217; Plants - 1981; Viruses - 4; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|35704 : 109.0) no description available & (reliability: 376.0) & (original description: Putative gt1, Description = Homeobox-leucine zipper protein HAT5, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf04339_354924-362277' '(at4g04890 : 358.0) Encodes a homeodomain protein that is expressed in the LI layer of the vegetative, floral and inflorescence meristems. Binds to the L1 box promoter element which is required in some proteins for L1 specific expression.; protodermal factor 2 (PDF2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: epidermal cell differentiation, regulation of transcription, DNA-dependent, cotyledon development; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein (TAIR:AT4G21750.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29139 : 116.0) no description available & (reliability: 716.0) & (original description: Putative PGSC0003DMG400014427, Description = BnaA03g44880D protein, PFAM = PF01852)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf04372_93150-100531' '(at4g00730 : 996.0) Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development; ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29139 : 206.0) no description available & (reliability: 1992.0) & (original description: Putative ANL2, Description = Homeobox-leucine zipper protein ANTHOCYANINLESS 2, PFAM = PF01852;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf04407_293447-297231' '(at3g01470 : 134.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.; homeobox 1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress, response to blue light, positive regulation of transcription, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 12515 Blast hits to 12478 proteins in 547 species: Archae - 0; Bacteria - 0; Metazoa - 9969; Fungi - 258; Plants - 2039; Viruses - 5; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|35704 : 109.0) no description available & (reliability: 268.0) & (original description: Putative HD12, Description = HD domain class transcription factor, PFAM = PF02183;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf04418_423701-428281' '(at2g35940 : 405.0) Encodes a member of the BEL-like homeodomain protein family. Ecotopic expression in the embryo sac leads to defects in nuclear migration and cellularization and embryo sacs with multiple egg cells. Loss of function alleles have no female gametophyte defects. The ecotopic expression phenotype requires KNAT3 because it can be suppressed by loss of KNAT3 function alleles. Localized to the nucleus but interaction with OFP1 relocates it to the cytoplasm.; BEL1-like homeodomain 1 (BLH1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 6 (TAIR:AT4G34610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35992 : 171.0) no description available & (gnl|cdd|70974 : 163.0) no description available & (reliability: 810.0) & (original description: Putative BLH1, Description = BEL1-like homeodomain protein 1, PFAM = PF05920;PF07526)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf04861_84963-90565' '(at4g34610 : 328.0) BEL1-like homeodomain 6 (BLH6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 7 (TAIR:AT2G16400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35992 : 176.0) no description available & (gnl|cdd|70974 : 167.0) no description available & (reliability: 656.0) & (original description: Putative BLH3, Description = BEL1-like homeodomain protein 3, PFAM = PF05920;PF07526)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf04994_50420-71429' '(at4g36870 : 390.0) Encodes a member of the BEL family of homeodomain proteins. Plants doubly mutant for saw1/saw2 (blh2/blh4) have serrated leaves. BP is expressed in the serrated leaves, therefore saw1/saw1 may act redundantly to repress BP in leaves.; BEL1-like homeodomain 2 (BLH2); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 4 (TAIR:AT2G23760.3); Has 5744 Blast hits to 5713 proteins in 356 species: Archae - 0; Bacteria - 3; Metazoa - 2532; Fungi - 390; Plants - 2517; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). & (gnl|cdd|35992 : 187.0) no description available & (gnl|cdd|70974 : 163.0) no description available & (reliability: 780.0) & (original description: Putative BLH2, Description = BEL1-like homeodomain protein 2, PFAM = PF07526;PF05920)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf05034_453218-459028' '(at4g00730 : 658.0) Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development; ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29139 : 175.0) no description available & (reliability: 1316.0) & (original description: Putative h3, Description = Homeodomain protein, PFAM = PF01852;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf05105_651-17779' '(at1g73360 : 511.0) Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. It is involved in trichome branching.; homeodomain GLABROUS 11 (HDG11); CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 12 (TAIR:AT1G17920.1); Has 12070 Blast hits to 11936 proteins in 534 species: Archae - 0; Bacteria - 0; Metazoa - 9179; Fungi - 319; Plants - 2364; Viruses - 8; Other Eukaryotes - 200 (source: NCBI BLink). & (gnl|cdd|29139 : 151.0) no description available & (reliability: 1022.0) & (original description: Putative HB83, Description = Homeobox-leucine zipper protein HDG11, PFAM = PF00046;PF01852)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf05146_547627-554350' '(at1g73360 : 840.0) Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. It is involved in trichome branching.; homeodomain GLABROUS 11 (HDG11); CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 12 (TAIR:AT1G17920.1); Has 12070 Blast hits to 11936 proteins in 534 species: Archae - 0; Bacteria - 0; Metazoa - 9179; Fungi - 319; Plants - 2364; Viruses - 8; Other Eukaryotes - 200 (source: NCBI BLink). & (gnl|cdd|29139 : 190.0) no description available & (reliability: 1680.0) & (original description: Putative HDG11, Description = Homeobox-leucine zipper protein HDG11, PFAM = PF01852;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf05294_8231-18420' '(at3g18380 : 285.0) sequence-specific DNA binding transcription factors;sequence-specific DNA binding; FUNCTIONS IN: sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15215.2). & (reliability: 570.0) & (original description: Putative SHH2, Description = Protein SAWADEE HOMEODOMAIN HOMOLOG 2, PFAM = PF16719)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf05506_621662-625185' '(at5g59340 : 126.0) Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. WOX2 has a putative Zinc finger domain downstream of the homeodomain. Transcripts are expressed in the egg cell, the zygote and the apical cell lineage and are reduced in met3-1 early embryos. This gene is necessary for cell divisions that form the apical embryo domain.; WUSCHEL related homeobox 2 (WOX2); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 1 (TAIR:AT3G18010.1); Has 921 Blast hits to 921 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 921; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8w0f1|wox5_orysa : 86.3) WUSCHEL-related homeobox 5 (Quiescent-specific homeobox) - Oryza sativa (Rice) & (reliability: 252.0) & (original description: Putative wox2, Description = Putative wuschel homeobox protein WOX2, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf05543_178984-182585' '(at3g01470 : 135.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.; homeobox 1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress, response to blue light, positive regulation of transcription, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 12515 Blast hits to 12478 proteins in 547 species: Archae - 0; Bacteria - 0; Metazoa - 9969; Fungi - 258; Plants - 2039; Viruses - 5; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|35704 : 114.0) no description available & (reliability: 270.0) & (original description: Putative hdz10, Description = Homeobox-leucine zipper protein HAT5, PFAM = PF00046;PF02183)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf05886_58022-60869' '(at2g46680 : 161.0) encodes a putative transcription factor that contains a homeodomain closely linked to a leucine zipper motif. Transcript is detected in all tissues examined. Is transcriptionally regulated in an ABA-dependent manner and may act in a signal transduction pathway which mediates a drought response.; homeobox 7 (HB-7); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to water deprivation, abscisic acid mediated signaling pathway, regulation of transcription, DNA-dependent, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox 12 (TAIR:AT3G61890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35704 : 110.0) no description available & (reliability: 322.0) & (original description: Putative hdz10, Description = Homeobox-leucine zipper protein ATHB-16, PFAM = PF02183;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf06027_82907-87067' '(at2g33880 : 190.0) Encodes a protein with similarity to WUS type homeodomain protein. Required for meristem growth and development and acts through positive regulation of WUS. Loss of function phenotypes include embryo lethality, hyponastic cotyledons, reduced root development and smaller meristems. Phenotypes can be rescued by addition of sucrose in the growth media. Overexpression can partially rescue the triple mutant cytokinin receptor phenotype suggesting HB-3 is a downstream effector of cytokinin signaling.; homeobox-3 (HB-3); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 8 (TAIR:AT5G45980.1); Has 671 Blast hits to 615 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 22; Plants - 589; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 380.0) & (original description: Putative wox9, Description = Putative wuschel homeobox protein WOX9, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf06267_413902-417382' '(q8ll11|wus_pethy : 367.0) Protein WUSCHEL (PhWUS) (Protein TERMINATOR) - Petunia hybrida (Petunia) & (at2g17950 : 134.0) Homeobox gene controlling the stem cell pool. Expressed in the stem cell organizing center of meristems. Required to keep the stem cells in an undifferentiated state. Regulation of WUS transcription is a central checkpoint in stem cell control. The size of the WUS expression domain controls the size of the stem cell population through WUS indirectly activating the expression of CLAVATA3 (CLV3) in the stem cells and CLV3 repressing WUS transcription through the CLV1 receptor kinase signaling pathway. Repression of WUS transcription through AGAMOUS (AG) activity controls stem cell activity in the determinate floral meristem. Binds to TAAT element core motif. WUS is also involved in cell differentiation during anther development.; WUSCHEL (WUS); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 1 (TAIR:AT3G18010.1); Has 617 Blast hits to 617 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 29; Fungi - 2; Plants - 575; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative WUS, Description = Protein WUSCHEL, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf06286_164439-168651' '(at1g69780 : 310.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; ATHB13; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cotyledon morphogenesis, regulation of transcription, DNA-dependent, response to sucrose stimulus, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT1G26960.1); Has 11763 Blast hits to 11710 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9272; Fungi - 193; Plants - 2061; Viruses - 5; Other Eukaryotes - 232 (source: NCBI BLink). & (gnl|cdd|35704 : 137.0) no description available & (reliability: 620.0) & (original description: Putative hdz10, Description = Homeobox-leucine zipper protein HOX21, PFAM = PF02183;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf06590_246271-249594' '(q8w0f1|wox5_orysa : 92.4) WUSCHEL-related homeobox 5 (Quiescent-specific homeobox) - Oryza sativa (Rice) & (at2g28610 : 91.3) Encodes a homeodomain containing protein that regulates lateral axis-dependent development of Arabidopsis flowers and is required for cell proliferation. It is expressed in a restricted number of L1 cells at the lateral regions of flower primordia, floral organ primordia, and young leaf primordia.; PRESSED FLOWER (PRS); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 1 (TAIR:AT3G18010.1); Has 1413 Blast hits to 1080 proteins in 151 species: Archae - 0; Bacteria - 53; Metazoa - 299; Fungi - 18; Plants - 657; Viruses - 6; Other Eukaryotes - 380 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative wox3, Description = Putative wuschel homeobox protein WOX3, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf06761_47474-54902' '(at5g25220 : 463.0) A member of class II knotted1-like homeobox gene family (together with KNAT4 and KNAT5). Expressed in: hypocotyl-root boundary, anther-filament junction in flowers, ovule-funiculus and peduncle-silique boundaries, petioles and root. Light-regulated expression with differential response to red/far-red light. KNAT3 promoter activity showed cell-type specific pattern along longitudinal root axis, restricted mainly to the differentiation zone of the root, namely in the cortex and pericycle. Not detected in lateral root primordia; KNOTTED1-like homeobox gene 3 (KNAT3); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to light stimulus, detection of cytokinin stimulus, cellular response to cytokine stimulus; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 35 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ELK (InterPro:IPR005539), KNOX1 (InterPro:IPR005540), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), KNOX2 (InterPro:IPR005541), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 4 (TAIR:AT5G11060.1); Has 6026 Blast hits to 5994 proteins in 341 species: Archae - 0; Bacteria - 2; Metazoa - 2058; Fungi - 371; Plants - 3387; Viruses - 4; Other Eukaryotes - 204 (source: NCBI BLink). & (o04136|knap3_maldo : 451.0) Homeobox protein knotted-1-like 3 (KNAP3) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|35992 : 167.0) no description available & (reliability: 926.0) & (original description: Putative KNAT3, Description = Homeobox protein knotted-1-like 3, PFAM = PF03790;PF03789;PF03791;PF05920)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf06879_35463-47431' '(at2g35940 : 299.0) Encodes a member of the BEL-like homeodomain protein family. Ecotopic expression in the embryo sac leads to defects in nuclear migration and cellularization and embryo sacs with multiple egg cells. Loss of function alleles have no female gametophyte defects. The ecotopic expression phenotype requires KNAT3 because it can be suppressed by loss of KNAT3 function alleles. Localized to the nucleus but interaction with OFP1 relocates it to the cytoplasm.; BEL1-like homeodomain 1 (BLH1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 6 (TAIR:AT4G34610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35992 : 178.0) no description available & (gnl|cdd|70974 : 157.0) no description available & (reliability: 598.0) & (original description: Putative BL2, Description = Bell-like homeodomain protein 2, PFAM = PF07526;PF05920)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf06923_18587-23242' '(at4g16780 : 268.0) Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin.; homeobox protein 2 (HB-2); CONTAINS InterPro DOMAIN/s: HD-ZIP protein, N-terminal (InterPro:IPR006712), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT5G47370.1); Has 7230 Blast hits to 7123 proteins in 465 species: Archae - 0; Bacteria - 0; Metazoa - 4716; Fungi - 327; Plants - 2046; Viruses - 18; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|35704 : 148.0) no description available & (gnl|cdd|68199 : 94.4) no description available & (reliability: 536.0) & (original description: Putative HAT4, Description = Homeobox-leucine zipper protein HAT4, PFAM = PF00046;PF04618;PF02183)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf06968_175202-181837' '(at4g16780 : 255.0) Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin.; homeobox protein 2 (HB-2); CONTAINS InterPro DOMAIN/s: HD-ZIP protein, N-terminal (InterPro:IPR006712), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT5G47370.1); Has 7230 Blast hits to 7123 proteins in 465 species: Archae - 0; Bacteria - 0; Metazoa - 4716; Fungi - 327; Plants - 2046; Viruses - 18; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|35704 : 154.0) no description available & (gnl|cdd|68199 : 82.5) no description available & (reliability: 510.0) & (original description: Putative HAT4, Description = HAT4, PFAM = PF04618;PF02183;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf07346_193487-201772' '(at5g02030 : 289.0) Mutant has additional lateral organs and phyllotaxy defect. Encodes a homeodomain transcription factor. Has sequence similarity to the Arabidopsis ovule development regulator Bell1. Binds directly to the AGAMOUS cis-regulatory element. Its localization to the nucleus is dependent on the coexpression of either STM or BP.; REPLUMLESS (RPL); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 8 (TAIR:AT2G27990.1); Has 5109 Blast hits to 5109 proteins in 341 species: Archae - 0; Bacteria - 2; Metazoa - 2052; Fungi - 344; Plants - 2481; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|35992 : 155.0) no description available & (gnl|cdd|70974 : 130.0) no description available & (reliability: 578.0) & (original description: Putative qSH1, Description = BEL1-like homeodomain protein 9, PFAM = PF05920;PF07526)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf07393_123381-129088' '(at5g03790 : 163.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) meristem identity regulator that acts together with LFY to induce CAL expression. It binds to the CAL promoter proximal CAATNATTG element. LMI1 acts primarily downstream of LFY in meristem identity regulation. The interaction between LFY, LMI1 and CAL resembles a feed-forward loop transcriptional network motif. The gene also had additional LFY-independent roles in leaf morphogenesis and bract formation.; homeobox 51 (HB51); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 22 (TAIR:AT2G36610.1); Has 11020 Blast hits to 10992 proteins in 578 species: Archae - 2; Bacteria - 0; Metazoa - 8622; Fungi - 156; Plants - 2028; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink). & (gnl|cdd|35704 : 119.0) no description available & (reliability: 326.0) & (original description: Putative BnaAnng00780D, Description = BnaAnng00780D protein, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf07451_183162-187814' '(at3g18010 : 187.0) Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. Its mRNA is expressed in the initiating vascular primordium of the cotyledons during heart and torpedo stages.; WUSCHEL related homeobox 1 (WOX1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 2 (TAIR:AT5G59340.1); Has 587 Blast hits to 587 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 587; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q6ybv1|wus_antma : 96.7) Protein WUSCHEL (Protein ROSULATA) - Antirrhinum majus (Garden snapdragon) & (reliability: 374.0) & (original description: Putative WOX1, Description = WUSCHEL-related homeobox 1, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf07790_96748-103449' '(at4g21750 : 1127.0) Encodes a homeobox protein similar to GL2. It is expressed in both the apical and basal daughter cells of the zygote as well as their progeny. Expression is detected starting the two-celled stage of embryo development and is later restricted to the outermost, epidermal cell layer from its inception. Its promoter is highly modular with each region contributing to specific aspects of the gene's spatial and temporal expression. Double mutant analysis with PDF2, another L1-specific gene, suggests that their functions are partially redundant and the absence of both of the genes result in abnormal shoot development.; MERISTEM LAYER 1 (ATML1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: epidermal cell differentiation, regulation of transcription, DNA-dependent, cotyledon development; LOCATED IN: nucleus; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: protodermal factor 2 (TAIR:AT4G04890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29139 : 213.0) no description available & (reliability: 2254.0) & (original description: Putative ATML1, Description = Homeobox-leucine zipper protein MERISTEM L1, PFAM = PF01852;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf08263_369081-376222' '(at2g35940 : 326.0) Encodes a member of the BEL-like homeodomain protein family. Ecotopic expression in the embryo sac leads to defects in nuclear migration and cellularization and embryo sacs with multiple egg cells. Loss of function alleles have no female gametophyte defects. The ecotopic expression phenotype requires KNAT3 because it can be suppressed by loss of KNAT3 function alleles. Localized to the nucleus but interaction with OFP1 relocates it to the cytoplasm.; BEL1-like homeodomain 1 (BLH1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 6 (TAIR:AT4G34610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35992 : 182.0) no description available & (gnl|cdd|70974 : 164.0) no description available & (reliability: 652.0) & (original description: Putative BL2, Description = Bell-like homeodomain protein 2, PFAM = PF07526;PF05920)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf08473_33364-36651' '(at2g22800 : 217.0) Encodes homeobox protein HAT9.; HAT9; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein family (TAIR:AT4G37790.1); Has 6755 Blast hits to 6732 proteins in 464 species: Archae - 0; Bacteria - 0; Metazoa - 4333; Fungi - 266; Plants - 2037; Viruses - 7; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|35704 : 135.0) no description available & (reliability: 434.0) & (original description: Putative HAT9, Description = Homeobox-leucine zipper protein HAT9, PFAM = PF00046;PF02183)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf08488_446559-454580' '(at5g02030 : 298.0) Mutant has additional lateral organs and phyllotaxy defect. Encodes a homeodomain transcription factor. Has sequence similarity to the Arabidopsis ovule development regulator Bell1. Binds directly to the AGAMOUS cis-regulatory element. Its localization to the nucleus is dependent on the coexpression of either STM or BP.; REPLUMLESS (RPL); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 8 (TAIR:AT2G27990.1); Has 5109 Blast hits to 5109 proteins in 341 species: Archae - 0; Bacteria - 2; Metazoa - 2052; Fungi - 344; Plants - 2481; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|35992 : 159.0) no description available & (gnl|cdd|70974 : 133.0) no description available & (reliability: 596.0) & (original description: Putative rpl, Description = REPLUMLESS-like protein, PFAM = PF05920;PF07526)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf08871_180659-185065' '(at2g22430 : 182.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein that is a target of the protein phosphatase ABI1 and regulates hormone responses in Arabidopsis.; homeobox protein 6 (HB6); FUNCTIONS IN: protein binding, sequence-specific DNA binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to water deprivation, positive regulation of transcription, abscisic acid mediated signaling pathway, negative regulation of abscisic acid mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 10935 Blast hits to 10899 proteins in 558 species: Archae - 5; Bacteria - 20; Metazoa - 8544; Fungi - 195; Plants - 1932; Viruses - 5; Other Eukaryotes - 234 (source: NCBI BLink). & (gnl|cdd|35704 : 120.0) no description available & (reliability: 364.0) & (original description: Putative hdz10, Description = Homeobox-leucine zipper protein ATHB-16, PFAM = PF02183;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf09456_80374-123802' '(at4g16780 : 142.0) Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin.; homeobox protein 2 (HB-2); CONTAINS InterPro DOMAIN/s: HD-ZIP protein, N-terminal (InterPro:IPR006712), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT5G47370.1); Has 7230 Blast hits to 7123 proteins in 465 species: Archae - 0; Bacteria - 0; Metazoa - 4716; Fungi - 327; Plants - 2046; Viruses - 18; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|68199 : 83.2) no description available & (reliability: 284.0) & (original description: Putative HAT1, Description = Homeobox associated leucine zipper protein, PFAM = PF00046;PF04618)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf09513_27856-36069' '(at1g15215 : 172.0) BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative DTF1, Description = Chloride channel E, PFAM = PF16719)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf09564_31851-36698' '(at5g03790 : 167.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) meristem identity regulator that acts together with LFY to induce CAL expression. It binds to the CAL promoter proximal CAATNATTG element. LMI1 acts primarily downstream of LFY in meristem identity regulation. The interaction between LFY, LMI1 and CAL resembles a feed-forward loop transcriptional network motif. The gene also had additional LFY-independent roles in leaf morphogenesis and bract formation.; homeobox 51 (HB51); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 22 (TAIR:AT2G36610.1); Has 11020 Blast hits to 10992 proteins in 578 species: Archae - 2; Bacteria - 0; Metazoa - 8622; Fungi - 156; Plants - 2028; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink). & (gnl|cdd|35704 : 117.0) no description available & (reliability: 334.0) & (original description: Putative Gl, Description = Multicellular trichome development class I homeodomain-leucine zipper transcription factor, PFAM = PF00046;PF02183)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf09709_209079-216667' '(at3g18380 : 211.0) sequence-specific DNA binding transcription factors;sequence-specific DNA binding; FUNCTIONS IN: sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15215.2). & (reliability: 422.0) & (original description: Putative SHH1, Description = Protein SAWADEE HOMEODOMAIN HOMOLOG 1, PFAM = PF16719)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf10889_107152-113250' '(at4g34610 : 345.0) BEL1-like homeodomain 6 (BLH6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 7 (TAIR:AT2G16400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35992 : 180.0) no description available & (gnl|cdd|70974 : 163.0) no description available & (reliability: 690.0) & (original description: Putative BLH6, Description = BEL1-like homeodomain protein 6, PFAM = PF07526;PF05920)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf11552_364333-379020' '(at1g28420 : 1026.0) homeobox-1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), Homeobox (InterPro:IPR001356), DDT domain (InterPro:IPR004022), DDT domain, subgroup (InterPro:IPR018500), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G44180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2052.0) & (original description: Putative RLT1, Description = Homeobox-DDT domain protein RLT1, PFAM = PF15612;PF15613;PF02791;PF00046;PF05066)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf12320_141031-149559' '(at4g03250 : 202.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-1 (TAIR:AT1G28420.1); Has 665 Blast hits to 657 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 482; Fungi - 17; Plants - 151; Viruses - 3; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative PGSC0003DMG400031247, Description = Homeobox protein NANOG, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf12526_50840-54728' '(at4g35550 : 153.0) Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. WOX13 is the only family member that does not contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box.; WUSCHEL related homeobox 13 (WOX13); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 14 (TAIR:AT1G20700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative wox13, Description = WOX13 protein, PFAM = PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf14805_223452-227112' '(at3g01470 : 137.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.; homeobox 1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress, response to blue light, positive regulation of transcription, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 12515 Blast hits to 12478 proteins in 547 species: Archae - 0; Bacteria - 0; Metazoa - 9969; Fungi - 258; Plants - 2039; Viruses - 5; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|35704 : 102.0) no description available & (reliability: 274.0) & (original description: Putative HAT5, Description = Homeobox-leucine zipper protein HAT5, PFAM = PF00046;PF02183)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf15373_5696-12350' '(at5g25220 : 392.0) A member of class II knotted1-like homeobox gene family (together with KNAT4 and KNAT5). Expressed in: hypocotyl-root boundary, anther-filament junction in flowers, ovule-funiculus and peduncle-silique boundaries, petioles and root. Light-regulated expression with differential response to red/far-red light. KNAT3 promoter activity showed cell-type specific pattern along longitudinal root axis, restricted mainly to the differentiation zone of the root, namely in the cortex and pericycle. Not detected in lateral root primordia; KNOTTED1-like homeobox gene 3 (KNAT3); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to light stimulus, detection of cytokinin stimulus, cellular response to cytokine stimulus; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 35 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ELK (InterPro:IPR005539), KNOX1 (InterPro:IPR005540), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), KNOX2 (InterPro:IPR005541), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 4 (TAIR:AT5G11060.1); Has 6026 Blast hits to 5994 proteins in 341 species: Archae - 0; Bacteria - 2; Metazoa - 2058; Fungi - 371; Plants - 3387; Viruses - 4; Other Eukaryotes - 204 (source: NCBI BLink). & (o04136|knap3_maldo : 381.0) Homeobox protein knotted-1-like 3 (KNAP3) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|35992 : 162.0) no description available & (reliability: 784.0) & (original description: Putative LET12, Description = Homeobox protein knotted-1-like LET12, PFAM = PF03791;PF05920;PF03789;PF03790)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf15994_64105-68281' '(at4g32980 : 300.0) Encodes transcription factor involved in photomorphogenesis. Regulates gibberellin biosynthesis. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed at low levels in developing stamens. Increased levels of ATH1 severely delay flowering in the C24 accession. Most remarkably, ectopically expressed ATH1 hardly had an effect on flowering time in the Col-0 and Ler accessions. ATH1 physically interacts with STM, BP and KNAT6 and enhances the shoot apical meristem defect of some of these genes suggesting a role in SAM maintenance. Nuclear localization is dependent upon interaction with STM.; homeobox gene 1 (ATH1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 7 (TAIR:AT2G16400.1); Has 5042 Blast hits to 5042 proteins in 335 species: Archae - 0; Bacteria - 0; Metazoa - 2114; Fungi - 285; Plants - 2468; Viruses - 0; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|35992 : 117.0) no description available & (gnl|cdd|70974 : 106.0) no description available & (reliability: 600.0) & (original description: Putative BL4, Description = Bell-like homeodomain protein 4, PFAM = PF07526;PF05920)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf17122_36132-39128' '(at2g46680 : 110.0) encodes a putative transcription factor that contains a homeodomain closely linked to a leucine zipper motif. Transcript is detected in all tissues examined. Is transcriptionally regulated in an ABA-dependent manner and may act in a signal transduction pathway which mediates a drought response.; homeobox 7 (HB-7); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to water deprivation, abscisic acid mediated signaling pathway, regulation of transcription, DNA-dependent, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox 12 (TAIR:AT3G61890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35704 : 103.0) no description available & (reliability: 220.0) & (original description: Putative HD, Description = Homeobox-leucine zipper protein, PFAM = PF02183;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf21935_3674-55656' '(at5g25220 : 379.0) A member of class II knotted1-like homeobox gene family (together with KNAT4 and KNAT5). Expressed in: hypocotyl-root boundary, anther-filament junction in flowers, ovule-funiculus and peduncle-silique boundaries, petioles and root. Light-regulated expression with differential response to red/far-red light. KNAT3 promoter activity showed cell-type specific pattern along longitudinal root axis, restricted mainly to the differentiation zone of the root, namely in the cortex and pericycle. Not detected in lateral root primordia; KNOTTED1-like homeobox gene 3 (KNAT3); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to light stimulus, detection of cytokinin stimulus, cellular response to cytokine stimulus; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 35 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ELK (InterPro:IPR005539), KNOX1 (InterPro:IPR005540), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), KNOX2 (InterPro:IPR005541), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 4 (TAIR:AT5G11060.1); Has 6026 Blast hits to 5994 proteins in 341 species: Archae - 0; Bacteria - 2; Metazoa - 2058; Fungi - 371; Plants - 3387; Viruses - 4; Other Eukaryotes - 204 (source: NCBI BLink). & (o04136|knap3_maldo : 369.0) Homeobox protein knotted-1-like 3 (KNAP3) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|35992 : 162.0) no description available & (reliability: 758.0) & (original description: Putative HOS58, Description = Homeobox protein knotted-1-like 2, PFAM = PF05920;PF03790;PF03791)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf22883_15566-19873' '(at2g22430 : 187.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein that is a target of the protein phosphatase ABI1 and regulates hormone responses in Arabidopsis.; homeobox protein 6 (HB6); FUNCTIONS IN: protein binding, sequence-specific DNA binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to water deprivation, positive regulation of transcription, abscisic acid mediated signaling pathway, negative regulation of abscisic acid mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 10935 Blast hits to 10899 proteins in 558 species: Archae - 5; Bacteria - 20; Metazoa - 8544; Fungi - 195; Plants - 1932; Viruses - 5; Other Eukaryotes - 234 (source: NCBI BLink). & (gnl|cdd|35704 : 119.0) no description available & (reliability: 374.0) & (original description: Putative hdz10, Description = Homeobox-leucine zipper protein ATHB-16, PFAM = PF02183;PF00046)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf30092_16869-21004' '(at4g16780 : 203.0) Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin.; homeobox protein 2 (HB-2); CONTAINS InterPro DOMAIN/s: HD-ZIP protein, N-terminal (InterPro:IPR006712), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT5G47370.1); Has 7230 Blast hits to 7123 proteins in 465 species: Archae - 0; Bacteria - 0; Metazoa - 4716; Fungi - 327; Plants - 2046; Viruses - 18; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|35704 : 147.0) no description available & (reliability: 406.0) & (original description: Putative HAT1, Description = Homeobox-leucine zipper protein HAT1, PFAM = PF00046;PF04618;PF02183)' T '27.3.22' 'RNA.regulation of transcription.HB,Homeobox transcription factor family' 'niben101scf38556_33242-42464' '(at5g02030 : 283.0) Mutant has additional lateral organs and phyllotaxy defect. Encodes a homeodomain transcription factor. Has sequence similarity to the Arabidopsis ovule development regulator Bell1. Binds directly to the AGAMOUS cis-regulatory element. Its localization to the nucleus is dependent on the coexpression of either STM or BP.; REPLUMLESS (RPL); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 8 (TAIR:AT2G27990.1); Has 5109 Blast hits to 5109 proteins in 341 species: Archae - 0; Bacteria - 2; Metazoa - 2052; Fungi - 344; Plants - 2481; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|35992 : 158.0) no description available & (gnl|cdd|70974 : 125.0) no description available & (reliability: 566.0) & (original description: Putative rpl, Description = REPLUMLESS-like protein, PFAM = PF05920;PF07526)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'nbv0.3scaffold7577_51496-54401' '(at4g17600 : 202.0) Encodes Lil3:1 (light-harvesting-like) protein. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. A generic LHC motif is present in Lil3:1.; LIL3:1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT5G47110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative LIL3:1, Description = Lil3 protein, PFAM = )' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'nbv0.3scaffold7950_33568-39540' '(at5g16820 : 338.0) Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes.; heat shock factor 3 (HSF3); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1E (TAIR:AT3G02990.1); Has 2455 Blast hits to 2420 proteins in 254 species: Archae - 0; Bacteria - 23; Metazoa - 373; Fungi - 496; Plants - 855; Viruses - 0; Other Eukaryotes - 708 (source: NCBI BLink). & (gnl|cdd|35846 : 214.0) no description available & (gnl|cdd|84779 : 212.0) no description available & (reliability: 632.0) & (original description: Putative HSFA1B, Description = Heat stress transcription factor A-1b, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'nbv0.3scaffold13032_39178-42684' '(at4g18880 : 199.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A4A (HSF A4A); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT5G45710.1); Has 2263 Blast hits to 2244 proteins in 239 species: Archae - 2; Bacteria - 4; Metazoa - 360; Fungi - 491; Plants - 856; Viruses - 0; Other Eukaryotes - 550 (source: NCBI BLink). & (gnl|cdd|84779 : 157.0) no description available & (gnl|cdd|35846 : 156.0) no description available & (reliability: 390.0) & (original description: Putative HSF3, Description = HSF domain class transcription factor, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'nbv0.3scaffold43679_1559-7314' '(at4g13980 : 425.0) member of Heat Stress Transcription Factor (Hsf) family; AT-HSFA5; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock factor 1 (TAIR:AT4G17750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35846 : 180.0) no description available & (gnl|cdd|84779 : 160.0) no description available & (reliability: 850.0) & (original description: Putative HSFA5, Description = Heat stress transcription factor A-5, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'nbv0.3scaffold61947_4089-8936' '(at5g16820 : 333.0) Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes.; heat shock factor 3 (HSF3); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1E (TAIR:AT3G02990.1); Has 2455 Blast hits to 2420 proteins in 254 species: Archae - 0; Bacteria - 23; Metazoa - 373; Fungi - 496; Plants - 855; Viruses - 0; Other Eukaryotes - 708 (source: NCBI BLink). & (gnl|cdd|84779 : 220.0) no description available & (gnl|cdd|35846 : 208.0) no description available & (reliability: 652.0) & (original description: Putative HSF8, Description = Heat shock factor protein HSF8, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'nbv0.3scaffold99065_1374-4156' '(at1g46264 : 272.0) Encodes SCHIZORIZA, a member of Heat Shock Transcription Factor (Hsf) family. Functions as a nuclear factor regulating asymmetry of stem cell divisions.; heat shock transcription factor B4 (HSFB4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: asymmetric cell division; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock factor 4 (TAIR:AT4G36990.1); Has 2061 Blast hits to 2048 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 324; Fungi - 468; Plants - 781; Viruses - 0; Other Eukaryotes - 488 (source: NCBI BLink). & (gnl|cdd|35846 : 150.0) no description available & (gnl|cdd|84779 : 150.0) no description available & (reliability: 544.0) & (original description: Putative HSFB4, Description = Heat stress transcription factor B-4, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'nbv0.5scaffold115_804293-809033' '(at4g11660 : 115.0) member of Heat Stress Transcription Factor (Hsf) family; AT-HSFB2B; FUNCTIONS IN: transcription repressor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 32476 Blast hits to 10764 proteins in 847 species: Archae - 36; Bacteria - 10454; Metazoa - 9035; Fungi - 1651; Plants - 6330; Viruses - 666; Other Eukaryotes - 4304 (source: NCBI BLink). & (gnl|cdd|35846 : 114.0) no description available & (gnl|cdd|84779 : 113.0) no description available & (reliability: 224.0) & (original description: Putative HSF, Description = Heat shock transcription factor, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'nbv0.5scaffold3798_88232-92015' '(at3g22830 : 329.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A6B (HSFA6B); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A2 (TAIR:AT2G26150.1); Has 2517 Blast hits to 2494 proteins in 242 species: Archae - 0; Bacteria - 17; Metazoa - 509; Fungi - 485; Plants - 797; Viruses - 4; Other Eukaryotes - 705 (source: NCBI BLink). & (gnl|cdd|35846 : 198.0) no description available & (gnl|cdd|84779 : 168.0) no description available & (reliability: 658.0) & (original description: Putative HSFA6b, Description = Heat stress transcription factor A-6b, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'nbv0.5scaffold7064_2031-5920' '(at2g26150 : 241.0) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.; heat shock transcription factor A2 (HSFA2); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35846 : 169.0) no description available & (gnl|cdd|84779 : 152.0) no description available & (reliability: 482.0) & (original description: Putative hsfa9, Description = HSFA9, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben044scf00003675ctg002_9845-13332' '(gnl|cdd|84779 : 121.0) no description available & (gnl|cdd|35846 : 113.0) no description available & (at5g03720 : 109.0) Member of Heat Stress Transcription Factor (Hsf) family. Expression is regulated by DREB2A and in turn HSFA3 regulates the expression of hsps Hsp18.1-CI and Hsp26.5-MII35S. Involved in establishing thermotolerence.; heat shock transcription factor A3 (HSFA3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to heat, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative PGSC0003DMG400041361, Description = Putative ovule protein, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben044scf00024619ctg004_12400-15945' '(gnl|cdd|84779 : 120.0) no description available & (gnl|cdd|35846 : 114.0) no description available & (at5g03720 : 108.0) Member of Heat Stress Transcription Factor (Hsf) family. Expression is regulated by DREB2A and in turn HSFA3 regulates the expression of hsps Hsp18.1-CI and Hsp26.5-MII35S. Involved in establishing thermotolerence.; heat shock transcription factor A3 (HSFA3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to heat, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative PGSC0003DMG400041361, Description = Putative ovule protein, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben044scf00039188ctg013_4765-8524' '(at2g26150 : 246.0) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.; heat shock transcription factor A2 (HSFA2); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35846 : 170.0) no description available & (gnl|cdd|84779 : 151.0) no description available & (reliability: 492.0) & (original description: Putative hsfa9, Description = HSFA9, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben044scf00054110ctg000_1121-4949' '(at3g22830 : 332.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A6B (HSFA6B); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A2 (TAIR:AT2G26150.1); Has 2517 Blast hits to 2494 proteins in 242 species: Archae - 0; Bacteria - 17; Metazoa - 509; Fungi - 485; Plants - 797; Viruses - 4; Other Eukaryotes - 705 (source: NCBI BLink). & (gnl|cdd|35846 : 199.0) no description available & (gnl|cdd|84779 : 168.0) no description available & (reliability: 664.0) & (original description: Putative HSFA6b, Description = Heat stress transcription factor A-6b, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101ctg15726_1-4008' '(gnl|cdd|35846 : 123.0) no description available & (at4g11660 : 122.0) member of Heat Stress Transcription Factor (Hsf) family; AT-HSFB2B; FUNCTIONS IN: transcription repressor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 32476 Blast hits to 10764 proteins in 847 species: Archae - 36; Bacteria - 10454; Metazoa - 9035; Fungi - 1651; Plants - 6330; Viruses - 666; Other Eukaryotes - 4304 (source: NCBI BLink). & (gnl|cdd|84779 : 119.0) no description available & (reliability: 240.0) & (original description: Putative HSF15, Description = HSF15, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf00073_465639-468954' '(at4g18880 : 307.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A4A (HSF A4A); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT5G45710.1); Has 2263 Blast hits to 2244 proteins in 239 species: Archae - 2; Bacteria - 4; Metazoa - 360; Fungi - 491; Plants - 856; Viruses - 0; Other Eukaryotes - 550 (source: NCBI BLink). & (gnl|cdd|35846 : 176.0) no description available & (gnl|cdd|84779 : 167.0) no description available & (reliability: 562.0) & (original description: Putative HSFA4A, Description = Heat stress transcription factor A-4a, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf00163_1272825-1275730' '(at4g17600 : 202.0) Encodes Lil3:1 (light-harvesting-like) protein. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. A generic LHC motif is present in Lil3:1.; LIL3:1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT5G47110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative LIL3:1, Description = Lil3 protein, PFAM = )' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf00868_1383-4529' '(at1g46264 : 277.0) Encodes SCHIZORIZA, a member of Heat Shock Transcription Factor (Hsf) family. Functions as a nuclear factor regulating asymmetry of stem cell divisions.; heat shock transcription factor B4 (HSFB4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: asymmetric cell division; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock factor 4 (TAIR:AT4G36990.1); Has 2061 Blast hits to 2048 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 324; Fungi - 468; Plants - 781; Viruses - 0; Other Eukaryotes - 488 (source: NCBI BLink). & (gnl|cdd|35846 : 155.0) no description available & (gnl|cdd|84779 : 154.0) no description available & (reliability: 554.0) & (original description: Putative HSFB4, Description = Heat stress transcription factor B-4, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf01111_547839-556882' '(at1g12800 : 605.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: RNA binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding proteins superfamily (TAIR:AT3G23700.1); Has 17110 Blast hits to 8844 proteins in 2496 species: Archae - 8; Bacteria - 12066; Metazoa - 261; Fungi - 174; Plants - 188; Viruses - 3; Other Eukaryotes - 4410 (source: NCBI BLink). & (gnl|cdd|81998 : 111.0) no description available & (reliability: 1210.0) & (original description: Putative HSF8, Description = Putative heat shock transcription factor 8, PFAM = PF00575)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf01305_158762-172103' '(at1g32330 : 318.0) Member of Heat Stress Transcription Factor (Hsf) family. Negatively regulated by HSP90.2.; heat shock transcription factor A1D (HSFA1D); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to heat; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock factor 1 (TAIR:AT4G17750.1); Has 2363 Blast hits to 2344 proteins in 251 species: Archae - 0; Bacteria - 10; Metazoa - 417; Fungi - 488; Plants - 855; Viruses - 2; Other Eukaryotes - 591 (source: NCBI BLink). & (gnl|cdd|84779 : 231.0) no description available & (gnl|cdd|35846 : 219.0) no description available & (reliability: 636.0) & (original description: Putative HSF8, Description = Heat shock factor protein HSF8, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf01529_447108-465886' '(gnl|cdd|84779 : 121.0) no description available & (gnl|cdd|35846 : 113.0) no description available & (at5g03720 : 107.0) Member of Heat Stress Transcription Factor (Hsf) family. Expression is regulated by DREB2A and in turn HSFA3 regulates the expression of hsps Hsp18.1-CI and Hsp26.5-MII35S. Involved in establishing thermotolerence.; heat shock transcription factor A3 (HSFA3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to heat, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative PGSC0003DMG400041361, Description = Putative ovule protein, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf01777_284012-288052' '(at2g26150 : 335.0) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.; heat shock transcription factor A2 (HSFA2); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84779 : 209.0) no description available & (gnl|cdd|35846 : 204.0) no description available & (reliability: 670.0) & (original description: Putative HSF30, Description = Heat shock factor protein HSF30, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf03252_207130-209864' '(at2g26150 : 140.0) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.; heat shock transcription factor A2 (HSFA2); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84779 : 128.0) no description available & (gnl|cdd|35846 : 124.0) no description available & (reliability: 280.0) & (original description: Putative HSF12, Description = HSF12, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf03438_260536-263896' '(at2g41690 : 182.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor B3 (HSFB3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to cadmium ion; LOCATED IN: nucleus; EXPRESSED IN: inflorescence meristem, leaf whorl, flower, cultured cell; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 2046 Blast hits to 2034 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 329; Fungi - 465; Plants - 775; Viruses - 0; Other Eukaryotes - 477 (source: NCBI BLink). & (gnl|cdd|84779 : 131.0) no description available & (gnl|cdd|35846 : 130.0) no description available & (reliability: 364.0) & (original description: Putative HSF5, Description = Heat shock transcription factor, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf03488_186097-192654' '(at4g13980 : 435.0) member of Heat Stress Transcription Factor (Hsf) family; AT-HSFA5; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock factor 1 (TAIR:AT4G17750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35846 : 179.0) no description available & (gnl|cdd|84779 : 158.0) no description available & (reliability: 870.0) & (original description: Putative HSFA5, Description = Heat stress transcription factor A-5, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf03518_487612-495873' '(at1g67970 : 215.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A8 (HSFA8); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock factor 1 (TAIR:AT4G17750.1); Has 2085 Blast hits to 2073 proteins in 225 species: Archae - 0; Bacteria - 3; Metazoa - 333; Fungi - 465; Plants - 781; Viruses - 0; Other Eukaryotes - 503 (source: NCBI BLink). & (gnl|cdd|35846 : 166.0) no description available & (gnl|cdd|84779 : 152.0) no description available & (reliability: 430.0) & (original description: Putative HSFA8, Description = Heat stress transcription factor A-8, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf03662_39836-44558' '(at5g16820 : 339.0) Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes.; heat shock factor 3 (HSF3); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1E (TAIR:AT3G02990.1); Has 2455 Blast hits to 2420 proteins in 254 species: Archae - 0; Bacteria - 23; Metazoa - 373; Fungi - 496; Plants - 855; Viruses - 0; Other Eukaryotes - 708 (source: NCBI BLink). & (gnl|cdd|84779 : 229.0) no description available & (gnl|cdd|35846 : 213.0) no description available & (reliability: 670.0) & (original description: Putative HSF8, Description = Heat shock factor protein HSF8, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf03923_321573-325374' '(at3g22830 : 318.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A6B (HSFA6B); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A2 (TAIR:AT2G26150.1); Has 2517 Blast hits to 2494 proteins in 242 species: Archae - 0; Bacteria - 17; Metazoa - 509; Fungi - 485; Plants - 797; Viruses - 4; Other Eukaryotes - 705 (source: NCBI BLink). & (gnl|cdd|35846 : 195.0) no description available & (gnl|cdd|84779 : 165.0) no description available & (reliability: 636.0) & (original description: Putative HSFA2B, Description = Heat stress transcription factor A-2b, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf04096_617112-620203' '(at4g11660 : 250.0) member of Heat Stress Transcription Factor (Hsf) family; AT-HSFB2B; FUNCTIONS IN: transcription repressor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 32476 Blast hits to 10764 proteins in 847 species: Archae - 36; Bacteria - 10454; Metazoa - 9035; Fungi - 1651; Plants - 6330; Viruses - 666; Other Eukaryotes - 4304 (source: NCBI BLink). & (gnl|cdd|35846 : 155.0) no description available & (gnl|cdd|84779 : 150.0) no description available & (reliability: 486.0) & (original description: Putative HSFB2A, Description = Heat stress transcription factor B-2a, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf04122_729703-732902' '(gnl|cdd|84779 : 110.0) no description available & (at5g03720 : 102.0) Member of Heat Stress Transcription Factor (Hsf) family. Expression is regulated by DREB2A and in turn HSFA3 regulates the expression of hsps Hsp18.1-CI and Hsp26.5-MII35S. Involved in establishing thermotolerence.; heat shock transcription factor A3 (HSFA3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to heat, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35846 : 101.0) no description available & (reliability: 204.0) & (original description: Putative HS1, Description = Heat shock transcription factor A3, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf04315_74015-94853' '(at1g12800 : 616.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: RNA binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding proteins superfamily (TAIR:AT3G23700.1); Has 17110 Blast hits to 8844 proteins in 2496 species: Archae - 8; Bacteria - 12066; Metazoa - 261; Fungi - 174; Plants - 188; Viruses - 3; Other Eukaryotes - 4410 (source: NCBI BLink). & (gnl|cdd|81998 : 110.0) no description available & (reliability: 1232.0) & (original description: Putative HSF8, Description = Putative heat shock transcription factor 8, PFAM = PF00575)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf04899_98145-103240' '(at5g62020 : 127.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor B2A (HSFB2A); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT4G11660.1); Has 2147 Blast hits to 2134 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 368; Fungi - 473; Plants - 782; Viruses - 0; Other Eukaryotes - 524 (source: NCBI BLink). & (gnl|cdd|35846 : 119.0) no description available & (gnl|cdd|84779 : 118.0) no description available & (reliability: 254.0) & (original description: Putative HSF15, Description = HSF15, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf05948_431223-434917' '(at2g26150 : 140.0) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.; heat shock transcription factor A2 (HSFA2); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84779 : 127.0) no description available & (gnl|cdd|35846 : 121.0) no description available & (reliability: 280.0) & (original description: Putative HSF1, Description = Heat stress transcription factor A-2, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf06769_147645-151845' '(at5g03720 : 289.0) Member of Heat Stress Transcription Factor (Hsf) family. Expression is regulated by DREB2A and in turn HSFA3 regulates the expression of hsps Hsp18.1-CI and Hsp26.5-MII35S. Involved in establishing thermotolerence.; heat shock transcription factor A3 (HSFA3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to heat, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35846 : 173.0) no description available & (gnl|cdd|84779 : 161.0) no description available & (reliability: 578.0) & (original description: Putative HSFA3, Description = Heat stress transcription factor A-3, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf08149_58066-66518' '(at5g16820 : 345.0) Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes.; heat shock factor 3 (HSF3); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1E (TAIR:AT3G02990.1); Has 2455 Blast hits to 2420 proteins in 254 species: Archae - 0; Bacteria - 23; Metazoa - 373; Fungi - 496; Plants - 855; Viruses - 0; Other Eukaryotes - 708 (source: NCBI BLink). & (gnl|cdd|35846 : 205.0) no description available & (gnl|cdd|84779 : 198.0) no description available & (reliability: 644.0) & (original description: Putative HSFA1, Description = Heat stress transcription factor A-1, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf08341_1079823-1083812' '(at3g24520 : 259.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor C1 (HSFC1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Interferon induced 35kDa, N-terminal (InterPro:IPR009938), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock factor 1 (TAIR:AT4G17750.1); Has 2230 Blast hits to 2217 proteins in 240 species: Archae - 2; Bacteria - 4; Metazoa - 382; Fungi - 481; Plants - 788; Viruses - 0; Other Eukaryotes - 573 (source: NCBI BLink). & (gnl|cdd|35846 : 147.0) no description available & (gnl|cdd|84779 : 143.0) no description available & (reliability: 518.0) & (original description: Putative HSF7, Description = HSF domain class transcription factor, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf08470_489628-513385' '(at3g22830 : 321.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A6B (HSFA6B); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A2 (TAIR:AT2G26150.1); Has 2517 Blast hits to 2494 proteins in 242 species: Archae - 0; Bacteria - 17; Metazoa - 509; Fungi - 485; Plants - 797; Viruses - 4; Other Eukaryotes - 705 (source: NCBI BLink). & (gnl|cdd|35846 : 194.0) no description available & (gnl|cdd|84779 : 173.0) no description available & (reliability: 642.0) & (original description: Putative HSFA2B, Description = Heat stress transcription factor A-2b, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf10940_588883-593109' '(at3g22830 : 311.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A6B (HSFA6B); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A2 (TAIR:AT2G26150.1); Has 2517 Blast hits to 2494 proteins in 242 species: Archae - 0; Bacteria - 17; Metazoa - 509; Fungi - 485; Plants - 797; Viruses - 4; Other Eukaryotes - 705 (source: NCBI BLink). & (gnl|cdd|35846 : 191.0) no description available & (gnl|cdd|84779 : 172.0) no description available & (reliability: 622.0) & (original description: Putative HSFA6b, Description = Heat stress transcription factor A-6b, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf11512_237005-240764' '(at2g26150 : 236.0) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.; heat shock transcription factor A2 (HSFA2); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35846 : 164.0) no description available & (gnl|cdd|84779 : 147.0) no description available & (reliability: 472.0) & (original description: Putative Hsf1, Description = Heat shock factor, PFAM = PF00447)' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf15538_30780-34760' '(at4g17600 : 249.0) Encodes Lil3:1 (light-harvesting-like) protein. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. A generic LHC motif is present in Lil3:1.; LIL3:1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT5G47110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative Lil3:1, Description = AT4g17600/dl4835w, PFAM = )' T '27.3.23' 'RNA.regulation of transcription.HSF,Heat-shock transcription factor family' 'niben101scf16530_66149-77564' '(at4g17600 : 218.0) Encodes Lil3:1 (light-harvesting-like) protein. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. A generic LHC motif is present in Lil3:1.; LIL3:1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT5G47110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative LIL3:1, Description = Lil3 protein, PFAM = )' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold7839_11003-16201' '(at1g22130 : 153.0) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL104 is expressed in pollen.It forms heterodimers with other MICK family members (AGL65 and AGL30). Involved in late stages of pollen development and pollen tube growth.; AGAMOUS-like 104 (AGL104); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: pollen development; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 66 (TAIR:AT1G77980.1); Has 6115 Blast hits to 6115 proteins in 750 species: Archae - 0; Bacteria - 0; Metazoa - 621; Fungi - 304; Plants - 5113; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 98.1) no description available & (q7xun2|mad17_orysa : 93.6) MADS-box transcription factor 17 (OsMADS17) (NMADS3) (RMADS213) - Oryza sativa (Rice) & (reliability: 306.0) & (original description: Putative Md, Description = Md, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold8679_1-12738' '(at3g49400 : 647.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781). & (reliability: 1294.0) & (original description: Putative At3g49400, Description = Transducin/WD40 domain-containing protein, PFAM = PF12657;PF00400;PF00400)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold12362_22613-29416' '(at2g45660 : 196.0) Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.; AGAMOUS-like 20 (AGL20); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to cold, positive regulation of flower development, maintenance of inflorescence meristem identity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 42 (TAIR:AT5G62165.3); Has 7364 Blast hits to 7361 proteins in 926 species: Archae - 0; Bacteria - 16; Metazoa - 673; Fungi - 316; Plants - 6262; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (q9xj60|mad50_orysa : 177.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|29020 : 124.0) no description available & (gnl|cdd|35238 : 100.0) no description available & (reliability: 392.0) & (original description: Putative soc1, Description = MADS-box transcription factor, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold14034_6207-22255' '(at5g65060 : 124.0) MADS domain protein - flowering regulator that is closely related to FLC; MADS AFFECTING FLOWERING 3 (MAF3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: negative regulation of flower development, regulation of transcription, DNA-dependent, vernalization response; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 31 (TAIR:AT5G65050.3); Has 6499 Blast hits to 6487 proteins in 808 species: Archae - 0; Bacteria - 0; Metazoa - 619; Fungi - 301; Plants - 5512; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (q6eu39|mads6_orysa : 123.0) MADS-box transcription factor 6 (OsMADS6) - Oryza sativa (Rice) & (gnl|cdd|29020 : 110.0) no description available & (reliability: 248.0) & (original description: Putative C11, Description = FLC, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold14528_5024-12333' '(at3g57390 : 153.0) encodes a MADS-box containing protein likely to be a transcription factor that is expressed in endosperm and developing gametophytes. The protein sequence is most similar to that of AGL15, which is expressed in developing embryos.; AGAMOUS-like 18 (AGL18); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 15 (TAIR:AT5G13790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q39295|agl15_brana : 151.0) Agamous-like MADS-box protein AGL15 - Brassica napus (Rape) & (gnl|cdd|29020 : 126.0) no description available & (gnl|cdd|35238 : 84.3) no description available & (reliability: 306.0) & (original description: Putative MADS9, Description = MADS9, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold24577_20910-29089' '(at1g22130 : 130.0) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL104 is expressed in pollen.It forms heterodimers with other MICK family members (AGL65 and AGL30). Involved in late stages of pollen development and pollen tube growth.; AGAMOUS-like 104 (AGL104); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: pollen development; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 66 (TAIR:AT1G77980.1); Has 6115 Blast hits to 6115 proteins in 750 species: Archae - 0; Bacteria - 0; Metazoa - 621; Fungi - 304; Plants - 5113; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|29020 : 96.7) no description available & (gnl|cdd|35238 : 83.5) no description available & (q6q9i2|mad15_orysa : 80.1) MADS-box transcription factor 15 (OsMADS15) (Protein APETALA1-like A) (FDRMADS3) (RMADS215) - Oryza sativa (Rice) & (reliability: 260.0) & (original description: Putative m1, Description = Putative MADS-domain transcription factor, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold24696_1-4721' '(at1g69120 : 212.0) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.; APETALA1 (AP1); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 8031 Blast hits to 8015 proteins in 981 species: Archae - 10; Bacteria - 56; Metazoa - 785; Fungi - 329; Plants - 6623; Viruses - 2; Other Eukaryotes - 226 (source: NCBI BLink). & (q42429|agl8_soltu : 212.0) Agamous-like MADS-box protein AGL8 homolog (POTM1-1) - Solanum tuberosum (Potato) & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 101.0) no description available & (reliability: 394.0) & (original description: Putative m15, Description = FRUITFULL-like protein, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold33296_4670-19559' '(q6ep49|mad27_orysa : 207.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at4g37940 : 198.0) encodes a MADS box protein, highly expressed in the root.; AGAMOUS-like 21 (AGL21); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 (TAIR:AT2G22630.1); Has 7243 Blast hits to 7239 proteins in 914 species: Archae - 0; Bacteria - 6; Metazoa - 648; Fungi - 305; Plants - 6180; Viruses - 2; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|29020 : 112.0) no description available & (gnl|cdd|35238 : 92.4) no description available & (reliability: 396.0) & (original description: Putative dal1, Description = MADS-box transcription factor, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold34634_9147-18983' '(at1g18750 : 122.0) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL65 is expressed in pollen.It forms heterodimers with other MICK family members (AGL104). Involved in late stages of pollen development and pollen tube growth.; AGAMOUS-like 65 (AGL65); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 30 (TAIR:AT2G03060.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative mads1, Description = MIKC* MADS-box transcription factor, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold39889_1629-12476' '(at4g22950 : 181.0) MADS-box protein AGL19; AGAMOUS-like 19 (AGL19); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 14 (TAIR:AT4G11880.1); Has 7291 Blast hits to 7288 proteins in 921 species: Archae - 2; Bacteria - 15; Metazoa - 646; Fungi - 323; Plants - 6182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (q9xj60|mad50_orysa : 181.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|29020 : 124.0) no description available & (gnl|cdd|35238 : 95.1) no description available & (reliability: 362.0) & (original description: Putative AGL19, Description = Agamous-like MADS-box protein AGL19, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold39890_923-14520' '(at2g45660 : 167.0) Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.; AGAMOUS-like 20 (AGL20); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to cold, positive regulation of flower development, maintenance of inflorescence meristem identity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 42 (TAIR:AT5G62165.3); Has 7364 Blast hits to 7361 proteins in 926 species: Archae - 0; Bacteria - 16; Metazoa - 673; Fungi - 316; Plants - 6262; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (q9xj60|mad50_orysa : 160.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|29020 : 119.0) no description available & (gnl|cdd|35238 : 87.0) no description available & (reliability: 334.0) & (original description: Putative AGL42, Description = AGL42, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold47646_1663-5867' '(at2g45660 : 82.0) Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.; AGAMOUS-like 20 (AGL20); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to cold, positive regulation of flower development, maintenance of inflorescence meristem identity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 42 (TAIR:AT5G62165.3); Has 7364 Blast hits to 7361 proteins in 926 species: Archae - 0; Bacteria - 16; Metazoa - 673; Fungi - 316; Plants - 6262; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative soc1, Description = MADS-box protein SOC1, PFAM = PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold58601_8164-10886' '(at5g60440 : 167.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29020 : 105.0) no description available & (gnl|cdd|35238 : 101.0) no description available & (reliability: 334.0) & (original description: Putative BnaA01g25970D, Description = BnaA01g25970D protein, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold64663_68-9078' '(q6ep49|mad27_orysa : 175.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at4g37940 : 160.0) encodes a MADS box protein, highly expressed in the root.; AGAMOUS-like 21 (AGL21); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 (TAIR:AT2G22630.1); Has 7243 Blast hits to 7239 proteins in 914 species: Archae - 0; Bacteria - 6; Metazoa - 648; Fungi - 305; Plants - 6180; Viruses - 2; Other Eukaryotes - 102 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative mads2, Description = MADS-box transcription factor 27, PFAM = PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.3scaffold80622_5239-7040' '(at5g60440 : 110.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29020 : 101.0) no description available & (q6z6w2|mad57_orysa : 82.0) MADS-box transcription factor 57 (OsMADS57) - Oryza sativa (Rice) & (reliability: 220.0) & (original description: Putative AGL62, Description = MADS-box transcription factor family protein, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold87_499581-502258' '(gnl|cdd|29020 : 91.3) no description available & (at5g60440 : 88.6) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative PGSC0003DMG400005119, Description = Mads box protein, putative, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold87_503002-505600' '(at5g60440 : 179.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29020 : 98.7) no description available & (gnl|cdd|35238 : 85.0) no description available & (reliability: 358.0) & (original description: Putative BnaAnng30570D, Description = BnaAnng30570D protein, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold245_808428-879403' '(at5g62165 : 184.0) Encodes a MADS box transcription factor. Expressed in quiescent center.; AGAMOUS-like 42 (AGL42); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 71 (TAIR:AT5G51870.1). & (q9xj60|mad50_orysa : 164.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|29020 : 123.0) no description available & (gnl|cdd|35238 : 98.1) no description available & (reliability: 368.0) & (original description: Putative DAL19, Description = DAL19 protein, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold319_129291-142577' '(at3g49400 : 609.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781). & (reliability: 1218.0) & (original description: Putative PGSC0003DMG400005917, Description = Transducin/WD40 repeat protein, PFAM = PF12657;PF00400;PF00400)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold431_464811-474647' '(at2g03060 : 147.0) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL30 is expressed in pollen.It forms heterodimers with other MICK family members.; AGAMOUS-like 30 (AGL30); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: pollen development; LOCATED IN: nucleus; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 65 (TAIR:AT1G18750.1); Has 6155 Blast hits to 6155 proteins in 757 species: Archae - 0; Bacteria - 0; Metazoa - 616; Fungi - 313; Plants - 5146; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative Mads1, Description = MADS box protein, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold468_87691-108622' '(q6ep49|mad27_orysa : 276.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at4g37940 : 255.0) encodes a MADS box protein, highly expressed in the root.; AGAMOUS-like 21 (AGL21); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 (TAIR:AT2G22630.1); Has 7243 Blast hits to 7239 proteins in 914 species: Archae - 0; Bacteria - 6; Metazoa - 648; Fungi - 305; Plants - 6180; Viruses - 2; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|29020 : 131.0) no description available & (gnl|cdd|35238 : 99.7) no description available & (reliability: 510.0) & (original description: Putative MADS27, Description = MADS-box transcription factor 27, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold574_544496-569091' '(at3g02310 : 246.0) MADS-box protein, binds K domain of AG in vivo; SEPALLATA 2 (SEP2); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7363 Blast hits to 7362 proteins in 916 species: Archae - 3; Bacteria - 0; Metazoa - 630; Fungi - 305; Plants - 6350; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (q03489|agl9_pethy : 229.0) Agamous-like MADS-box protein AGL9 homolog (Floral homeotic protein FBP2) (Floral-binding protein 2) - Petunia hybrida (Petunia) & (gnl|cdd|29020 : 125.0) no description available & (gnl|cdd|35238 : 103.0) no description available & (reliability: 476.0) & (original description: Putative 37500, Description = Developmental protein SEPALLATA 2, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold1173_283057-300944' '(q6ep49|mad27_orysa : 236.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at4g37940 : 229.0) encodes a MADS box protein, highly expressed in the root.; AGAMOUS-like 21 (AGL21); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 (TAIR:AT2G22630.1); Has 7243 Blast hits to 7239 proteins in 914 species: Archae - 0; Bacteria - 6; Metazoa - 648; Fungi - 305; Plants - 6180; Viruses - 2; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|29020 : 127.0) no description available & (gnl|cdd|35238 : 101.0) no description available & (reliability: 458.0) & (original description: Putative ANR1, Description = MADS-box transcription factor ANR1, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold1221_418716-427104' '(q03489|agl9_pethy : 384.0) Agamous-like MADS-box protein AGL9 homolog (Floral homeotic protein FBP2) (Floral-binding protein 2) - Petunia hybrida (Petunia) & (at1g24260 : 298.0) Member of the MADs box transcription factor family. SEP3 is redundant with SEP1 and 2. Flowers of SEP1/2/3 triple mutants show a conversion of petals and stamens to sepals.SEP3 forms heterotetrameric complexes with other MADS box family members and binds to the CArG box motif.; SEPALLATA3 (SEP3); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT3G02310.1). & (gnl|cdd|29020 : 132.0) no description available & (gnl|cdd|35238 : 114.0) no description available & (reliability: 596.0) & (original description: Putative FBP2, Description = Agamous-like MADS-box protein AGL9 homolog, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold1489_115615-126517' '(at4g09960 : 233.0) a MADS box transcription factor expressed in the carpel and ovules; SEEDSTICK (STK); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, ovule development, carpel development; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT2G42830.2). & (q40872|ag_pangi : 226.0) Floral homeotic protein AGAMOUS (GAG2) - Panax ginseng (Korean ginseng) & (gnl|cdd|29020 : 126.0) no description available & (gnl|cdd|35238 : 93.5) no description available & (reliability: 466.0) & (original description: Putative AGL11, Description = Agamous-like MADS-box protein AGL11, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold1501_416140-433824' '(at2g45660 : 183.0) Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.; AGAMOUS-like 20 (AGL20); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to cold, positive regulation of flower development, maintenance of inflorescence meristem identity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 42 (TAIR:AT5G62165.3); Has 7364 Blast hits to 7361 proteins in 926 species: Archae - 0; Bacteria - 16; Metazoa - 673; Fungi - 316; Plants - 6262; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (q9xj60|mad50_orysa : 163.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|29020 : 126.0) no description available & (gnl|cdd|35238 : 97.0) no description available & (reliability: 366.0) & (original description: Putative soc1, Description = MADS-box transcription factor, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold1614_72713-81544' '(at2g22540 : 206.0) Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter.; SHORT VEGETATIVE PHASE (SVP); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 24 (TAIR:AT4G24540.1); Has 7281 Blast hits to 7260 proteins in 901 species: Archae - 3; Bacteria - 13; Metazoa - 824; Fungi - 296; Plants - 6010; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (q9xj66|mad22_orysa : 184.0) MADS-box transcription factor 22 (OsMADS22) - Oryza sativa (Rice) & (gnl|cdd|29020 : 119.0) no description available & (gnl|cdd|35238 : 88.9) no description available & (reliability: 394.0) & (original description: Putative AGL24, Description = MADS-box protein AGL24, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold2090_34411-50459' '(q40700|mads1_orysa : 122.0) MADS-box transcription factor 1 (OsMADS1) (Protein LEAFY HULL STERILE1) (Protein SEPALLATA-like) - Oryza sativa (Rice) & (at5g65050 : 117.0) Originally published as Agamous like MADS-box protein AGL31. One of a group of MADS box genes involved in control of flowering time. Four variant sequences have been identified for this locus but have not been characterized for differences in expression pattern and/or function.; AGAMOUS-like 31 (AGL31); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G65060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29020 : 112.0) no description available & (gnl|cdd|35238 : 87.4) no description available & (reliability: 234.0) & (original description: Putative C11, Description = FLC, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold2462_156771-160270' '(at5g48670 : 171.0) AGL80 is a member of the MADS box family of genes. AGL80 functions as a transcription factor within the central cell gene regulatory network and controls the expression of downstream genes required for central cell development and function.; AGAMOUS-like 80 (AGL80); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: central cell, endosperm; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT5G27810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35238 : 101.0) no description available & (gnl|cdd|29021 : 98.4) no description available & (reliability: 342.0) & (original description: Putative AGL45, Description = Agamous-like MADS-box protein AGL45, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold2914_184685-211831' '(q9xj60|mad50_orysa : 165.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (at4g22950 : 164.0) MADS-box protein AGL19; AGAMOUS-like 19 (AGL19); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 14 (TAIR:AT4G11880.1); Has 7291 Blast hits to 7288 proteins in 921 species: Archae - 2; Bacteria - 15; Metazoa - 646; Fungi - 323; Plants - 6182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|29020 : 115.0) no description available & (gnl|cdd|35238 : 82.3) no description available & (reliability: 328.0) & (original description: Putative SOC1, Description = SOC1, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold3426_85282-87962' '(gnl|cdd|29021 : 83.8) no description available & (at3g05860 : 81.3) MADS-box transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: embryo, endosperm; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 46 (TAIR:AT2G28700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative PHE1, Description = MADS-box transcription factor family protein, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold3748_208508-225552' '(at5g62165 : 112.0) Encodes a MADS box transcription factor. Expressed in quiescent center.; AGAMOUS-like 42 (AGL42); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 71 (TAIR:AT5G51870.1). & (q9xj60|mad50_orysa : 93.2) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (reliability: 224.0) & (original description: Putative soc1, Description = SOC1-like protein, PFAM = PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold5334_85932-98788' '(at2g45650 : 133.0) sequence suggests this encodes a MADS-box transcription factor; AGAMOUS-like 6 (AGL6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, floral organ development; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 13 (TAIR:AT3G61120.1); Has 7294 Blast hits to 7293 proteins in 914 species: Archae - 0; Bacteria - 0; Metazoa - 630; Fungi - 307; Plants - 6281; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (q6eu39|mads6_orysa : 131.0) MADS-box transcription factor 6 (OsMADS6) - Oryza sativa (Rice) & (gnl|cdd|29020 : 114.0) no description available & (gnl|cdd|35238 : 88.1) no description available & (reliability: 266.0) & (original description: Putative defh7, Description = Putative MADS-domain transcription factor DEFH7, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold6423_25441-33620' '(at1g22130 : 138.0) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL104 is expressed in pollen.It forms heterodimers with other MICK family members (AGL65 and AGL30). Involved in late stages of pollen development and pollen tube growth.; AGAMOUS-like 104 (AGL104); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: pollen development; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 66 (TAIR:AT1G77980.1); Has 6115 Blast hits to 6115 proteins in 750 species: Archae - 0; Bacteria - 0; Metazoa - 621; Fungi - 304; Plants - 5113; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|29020 : 95.6) no description available & (gnl|cdd|35238 : 84.3) no description available & (q41276|ap1_sinal : 80.1) Floral homeotic protein APETALA1 (MADS C) - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 276.0) & (original description: Putative AGL67, Description = Agamous-like 67, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold6542_836-19979' '(q39685|cmb1_diaca : 239.0) MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink) & (at2g03710 : 225.0) This gene belongs to the family of SEP genes. It is involved in the development of sepals, petals, stamens and carpels. Additionally, it plays a central role in the determination of flower meristem and organ identity.; SEPALLATA 4 (SEP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29020 : 127.0) no description available & (gnl|cdd|35238 : 99.3) no description available & (reliability: 450.0) & (original description: Putative AGL3, Description = Agamous-like MADS-box protein AGL3, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'nbv0.5scaffold7006_25982-29101' '(at2g45660 : 108.0) Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.; AGAMOUS-like 20 (AGL20); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to cold, positive regulation of flower development, maintenance of inflorescence meristem identity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 42 (TAIR:AT5G62165.3); Has 7364 Blast hits to 7361 proteins in 926 species: Archae - 0; Bacteria - 16; Metazoa - 673; Fungi - 316; Plants - 6262; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative SOC1, Description = SOC1-like protein, PFAM = PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044ctg25948687_1-3120' '(at1g69120 : 210.0) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.; APETALA1 (AP1); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 8031 Blast hits to 8015 proteins in 981 species: Archae - 10; Bacteria - 56; Metazoa - 785; Fungi - 329; Plants - 6623; Viruses - 2; Other Eukaryotes - 226 (source: NCBI BLink). & (q41276|ap1_sinal : 207.0) Floral homeotic protein APETALA1 (MADS C) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|29020 : 121.0) no description available & (gnl|cdd|35238 : 98.9) no description available & (reliability: 390.0) & (original description: Putative squa, Description = Squamosa protein, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00000664ctg001_1-2260' '(gnl|cdd|29020 : 96.7) no description available & (at5g60440 : 94.4) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35238 : 82.3) no description available & (reliability: 188.8) & (original description: Putative BnaC04g37430D, Description = MADS-box transcription factor family protein, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00004683ctg023_10644-13563' '(at4g09960 : 112.0) a MADS box transcription factor expressed in the carpel and ovules; SEEDSTICK (STK); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, ovule development, carpel development; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT2G42830.2). & (q40872|ag_pangi : 103.0) Floral homeotic protein AGAMOUS (GAG2) - Panax ginseng (Korean ginseng) & (reliability: 224.0) & (original description: Putative ag, Description = AGAMOUS-like protein, PFAM = PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00005051ctg009_5566-7851' '(q6ep49|mad27_orysa : 134.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at3g57230 : 123.0) MADS-box transcription factor. Expressed in leaf, root and stem, with higher RNA accumulation in guard cells and trichomes.; AGAMOUS-like 16 (AGL16); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, stomatal lineage progression; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 21 (TAIR:AT4G37940.1); Has 7191 Blast hits to 7190 proteins in 917 species: Archae - 0; Bacteria - 14; Metazoa - 643; Fungi - 316; Plants - 6129; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative mads2, Description = MADS-box transcription factor 27, PFAM = PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00005475ctg013_41067-51767' '(q42429|agl8_soltu : 301.0) Agamous-like MADS-box protein AGL8 homolog (POTM1-1) - Solanum tuberosum (Potato) & (at5g60910 : 242.0) MADS box gene negatively regulated by APETALA1; AGAMOUS-like 8 (AGL8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of flower development, maintenance of inflorescence meristem identity, fruit development; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G69120.1); Has 3783 Blast hits to 3782 proteins in 618 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 10; Plants - 3766; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|29020 : 118.0) no description available & (gnl|cdd|35238 : 93.5) no description available & (reliability: 442.0) & (original description: Putative m28, Description = FRUITFULL-like protein, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00011657ctg014_2910-6670' '(q6ep49|mad27_orysa : 114.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at4g37940 : 111.0) encodes a MADS box protein, highly expressed in the root.; AGAMOUS-like 21 (AGL21); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 (TAIR:AT2G22630.1); Has 7243 Blast hits to 7239 proteins in 914 species: Archae - 0; Bacteria - 6; Metazoa - 648; Fungi - 305; Plants - 6180; Viruses - 2; Other Eukaryotes - 102 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative AGL6, Description = MADS-box transcription factor 27, PFAM = PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00012150ctg008_4463-14941' '(q42429|agl8_soltu : 282.0) Agamous-like MADS-box protein AGL8 homolog (POTM1-1) - Solanum tuberosum (Potato) & (at5g60910 : 248.0) MADS box gene negatively regulated by APETALA1; AGAMOUS-like 8 (AGL8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of flower development, maintenance of inflorescence meristem identity, fruit development; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G69120.1); Has 3783 Blast hits to 3782 proteins in 618 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 10; Plants - 3766; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 96.6) no description available & (reliability: 450.0) & (original description: Putative TDR4, Description = Agamous-like MADS-box protein AGL8 homolog, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00013130ctg001_1756-10809' '(q6ep49|mad27_orysa : 147.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at4g37940 : 143.0) encodes a MADS box protein, highly expressed in the root.; AGAMOUS-like 21 (AGL21); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 (TAIR:AT2G22630.1); Has 7243 Blast hits to 7239 proteins in 914 species: Archae - 0; Bacteria - 6; Metazoa - 648; Fungi - 305; Plants - 6180; Viruses - 2; Other Eukaryotes - 102 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative mads2, Description = MADS-box transcription factor 27, PFAM = PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00016312ctg007_950-6993' '(q39685|cmb1_diaca : 172.0) MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink) & (at2g03710 : 152.0) This gene belongs to the family of SEP genes. It is involved in the development of sepals, petals, stamens and carpels. Additionally, it plays a central role in the determination of flower meristem and organ identity.; SEPALLATA 4 (SEP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85485 : 103.0) no description available & (reliability: 304.0) & (original description: Putative 37135, Description = Sepallata 1, PFAM = PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00017063ctg000_7985-10633' '(at5g60440 : 192.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29020 : 98.7) no description available & (gnl|cdd|35238 : 87.0) no description available & (reliability: 384.0) & (original description: Putative DIA, Description = MADS-box transcription factor family protein, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00020832ctg004_979-6044' '(q39685|cmb1_diaca : 145.0) MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink) & (at2g03710 : 130.0) This gene belongs to the family of SEP genes. It is involved in the development of sepals, petals, stamens and carpels. Additionally, it plays a central role in the determination of flower meristem and organ identity.; SEPALLATA 4 (SEP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85485 : 92.1) no description available & (reliability: 260.0) & (original description: Putative m2, Description = MADS-box transcription factor, PFAM = PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00022695ctg008_8057-10710' '(at5g60440 : 171.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29020 : 102.0) no description available & (gnl|cdd|35238 : 90.8) no description available & (reliability: 342.0) & (original description: Putative BnaAnng30570D, Description = BnaAnng30570D protein, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00026136ctg011_3007-5665' '(gnl|cdd|29020 : 99.4) no description available & (at5g60440 : 95.9) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35238 : 87.0) no description available & (reliability: 191.8) & (original description: Putative PGSC0003DMG400039595, Description = MADS-box transcription factor family protein, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00026669ctg008_1-1250' '(at5g60440 : 100.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative PGSC0003DMG400005131, Description = Transcription factor, MADS-box, PFAM = )' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00029554ctg007_1-18650' '(at3g02310 : 269.0) MADS-box protein, binds K domain of AG in vivo; SEPALLATA 2 (SEP2); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7363 Blast hits to 7362 proteins in 916 species: Archae - 3; Bacteria - 0; Metazoa - 630; Fungi - 305; Plants - 6350; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (q03489|agl9_pethy : 256.0) Agamous-like MADS-box protein AGL9 homolog (Floral homeotic protein FBP2) (Floral-binding protein 2) - Petunia hybrida (Petunia) & (gnl|cdd|29020 : 125.0) no description available & (gnl|cdd|35238 : 104.0) no description available & (reliability: 526.0) & (original description: Putative 37500, Description = Developmental protein SEPALLATA 2, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00029654ctg000_1-14518' '(at2g45660 : 159.0) Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.; AGAMOUS-like 20 (AGL20); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to cold, positive regulation of flower development, maintenance of inflorescence meristem identity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 42 (TAIR:AT5G62165.3); Has 7364 Blast hits to 7361 proteins in 926 species: Archae - 0; Bacteria - 16; Metazoa - 673; Fungi - 316; Plants - 6262; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (q9xj60|mad50_orysa : 156.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|29020 : 120.0) no description available & (gnl|cdd|35238 : 82.3) no description available & (reliability: 318.0) & (original description: Putative AGL72, Description = MADS-box protein AGL72, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben044scf00037427ctg002_3036-14769' '(q6ep49|mad27_orysa : 140.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at4g37940 : 134.0) encodes a MADS box protein, highly expressed in the root.; AGAMOUS-like 21 (AGL21); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 (TAIR:AT2G22630.1); Has 7243 Blast hits to 7239 proteins in 914 species: Archae - 0; Bacteria - 6; Metazoa - 648; Fungi - 305; Plants - 6180; Viruses - 2; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|29020 : 119.0) no description available & (gnl|cdd|35238 : 88.9) no description available & (reliability: 268.0) & (original description: Putative dal2, Description = MADS-box transcription factor, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00061_45797-53186' '(q6eu39|mads6_orysa : 262.0) MADS-box transcription factor 6 (OsMADS6) - Oryza sativa (Rice) & (at2g45650 : 261.0) sequence suggests this encodes a MADS-box transcription factor; AGAMOUS-like 6 (AGL6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, floral organ development; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 13 (TAIR:AT3G61120.1); Has 7294 Blast hits to 7293 proteins in 914 species: Archae - 0; Bacteria - 0; Metazoa - 630; Fungi - 307; Plants - 6281; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|29020 : 131.0) no description available & (gnl|cdd|35238 : 110.0) no description available & (reliability: 522.0) & (original description: Putative MADS6, Description = MADS-box transcription factor 6, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00069_1260137-1286498' '(q6ep49|mad27_orysa : 247.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at4g37940 : 237.0) encodes a MADS box protein, highly expressed in the root.; AGAMOUS-like 21 (AGL21); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 (TAIR:AT2G22630.1); Has 7243 Blast hits to 7239 proteins in 914 species: Archae - 0; Bacteria - 6; Metazoa - 648; Fungi - 305; Plants - 6180; Viruses - 2; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|29020 : 131.0) no description available & (gnl|cdd|35238 : 101.0) no description available & (reliability: 474.0) & (original description: Putative MADS27, Description = MADS-box transcription factor 27, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00276_242926-252850' '(at2g22540 : 206.0) Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter.; SHORT VEGETATIVE PHASE (SVP); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 24 (TAIR:AT4G24540.1); Has 7281 Blast hits to 7260 proteins in 901 species: Archae - 3; Bacteria - 13; Metazoa - 824; Fungi - 296; Plants - 6010; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (q9xj66|mad22_orysa : 184.0) MADS-box transcription factor 22 (OsMADS22) - Oryza sativa (Rice) & (gnl|cdd|29020 : 120.0) no description available & (gnl|cdd|35238 : 90.0) no description available & (reliability: 386.0) & (original description: Putative M211, Description = MPF2-like, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00304_773955-787368' '(at3g49400 : 578.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781). & (reliability: 1156.0) & (original description: Putative TCM_015503, Description = Transducin/WD40 repeat-like superfamily protein, putative, PFAM = PF12657;PF00400;PF00400)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00320_174212-184967' '(at4g09960 : 239.0) a MADS box transcription factor expressed in the carpel and ovules; SEEDSTICK (STK); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, ovule development, carpel development; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT2G42830.2). & (q40872|ag_pangi : 227.0) Floral homeotic protein AGAMOUS (GAG2) - Panax ginseng (Korean ginseng) & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 93.1) no description available & (reliability: 478.0) & (original description: Putative AGL11, Description = Agamous-like MADS-box protein AGL11, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00337_426072-433575' '(q39685|cmb1_diaca : 270.0) MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink) & (at3g02310 : 260.0) MADS-box protein, binds K domain of AG in vivo; SEPALLATA 2 (SEP2); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7363 Blast hits to 7362 proteins in 916 species: Archae - 3; Bacteria - 0; Metazoa - 630; Fungi - 305; Plants - 6350; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|29020 : 135.0) no description available & (gnl|cdd|35238 : 110.0) no description available & (reliability: 512.0) & (original description: Putative CMB1, Description = MADS-box protein CMB1, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00366_313943-323706' '(q03489|agl9_pethy : 409.0) Agamous-like MADS-box protein AGL9 homolog (Floral homeotic protein FBP2) (Floral-binding protein 2) - Petunia hybrida (Petunia) & (at1g24260 : 300.0) Member of the MADs box transcription factor family. SEP3 is redundant with SEP1 and 2. Flowers of SEP1/2/3 triple mutants show a conversion of petals and stamens to sepals.SEP3 forms heterotetrameric complexes with other MADS box family members and binds to the CArG box motif.; SEPALLATA3 (SEP3); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT3G02310.1). & (gnl|cdd|29020 : 132.0) no description available & (gnl|cdd|35238 : 113.0) no description available & (reliability: 600.0) & (original description: Putative FBP2, Description = Agamous-like MADS-box protein AGL9 homolog, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00397_1171889-1183575' '(at2g22540 : 150.0) Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter.; SHORT VEGETATIVE PHASE (SVP); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 24 (TAIR:AT4G24540.1); Has 7281 Blast hits to 7260 proteins in 901 species: Archae - 3; Bacteria - 13; Metazoa - 824; Fungi - 296; Plants - 6010; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (q5k4r0|mad47_orysa : 136.0) MADS-box transcription factor 47 (OsMADS47) - Oryza sativa (Rice) & (gnl|cdd|29020 : 115.0) no description available & (gnl|cdd|35238 : 80.8) no description available & (reliability: 284.0) & (original description: Putative S21, Description = MADS-box protein STMADS11 subfamily, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00397_1172287-1183584' '(at2g22540 : 140.0) Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter.; SHORT VEGETATIVE PHASE (SVP); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 24 (TAIR:AT4G24540.1); Has 7281 Blast hits to 7260 proteins in 901 species: Archae - 3; Bacteria - 13; Metazoa - 824; Fungi - 296; Plants - 6010; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (q5k4r0|mad47_orysa : 132.0) MADS-box transcription factor 47 (OsMADS47) - Oryza sativa (Rice) & (gnl|cdd|29020 : 114.0) no description available & (reliability: 270.0) & (original description: Putative inco, Description = Incomposita protein, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00490_227602-240521' '(at4g22950 : 175.0) MADS-box protein AGL19; AGAMOUS-like 19 (AGL19); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 14 (TAIR:AT4G11880.1); Has 7291 Blast hits to 7288 proteins in 921 species: Archae - 2; Bacteria - 15; Metazoa - 646; Fungi - 323; Plants - 6182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (q9xj60|mad50_orysa : 164.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|29020 : 121.0) no description available & (gnl|cdd|35238 : 86.2) no description available & (reliability: 350.0) & (original description: Putative AGL19, Description = Agamous-like MADS-box protein AGL19, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00508_1025054-1066460' '(at1g77080 : 115.0) MADS domain protein - flowering regulator that is closely related to FLC. Deletion of this locus in Nd ecotype is correlated with earlier flowering in short days suggesting function as a negative regulator of flowering.; K-box region and MADS-box transcription factor family protein ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: photoperiodism, flowering, negative regulation of flower development, regulation of transcription, DNA-dependent, regulation of flower development; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G65060.1); Has 6885 Blast hits to 6879 proteins in 856 species: Archae - 0; Bacteria - 1; Metazoa - 618; Fungi - 302; Plants - 5888; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (q40700|mads1_orysa : 107.0) MADS-box transcription factor 1 (OsMADS1) (Protein LEAFY HULL STERILE1) (Protein SEPALLATA-like) - Oryza sativa (Rice) & (gnl|cdd|29020 : 100.0) no description available & (gnl|cdd|35238 : 87.0) no description available & (reliability: 230.0) & (original description: Putative AGL27, Description = Agamous-like MADS-box protein AGL27, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00571_608169-619420' '(at5g60440 : 104.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29020 : 102.0) no description available & (gnl|cdd|35238 : 83.1) no description available & (reliability: 208.0) & (original description: Putative BnaC04g37430D, Description = BnaC04g37430D protein, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00589_144316-197098' '(q6ep49|mad27_orysa : 266.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at3g57230 : 243.0) MADS-box transcription factor. Expressed in leaf, root and stem, with higher RNA accumulation in guard cells and trichomes.; AGAMOUS-like 16 (AGL16); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, stomatal lineage progression; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 21 (TAIR:AT4G37940.1); Has 7191 Blast hits to 7190 proteins in 917 species: Archae - 0; Bacteria - 14; Metazoa - 643; Fungi - 316; Plants - 6129; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). & (gnl|cdd|29020 : 134.0) no description available & (gnl|cdd|35238 : 101.0) no description available & (reliability: 486.0) & (original description: Putative MADS27, Description = MADS-box transcription factor 27, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00627_9818-65927' '(at5g62165 : 180.0) Encodes a MADS box transcription factor. Expressed in quiescent center.; AGAMOUS-like 42 (AGL42); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 71 (TAIR:AT5G51870.1). & (q9xj60|mad50_orysa : 152.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|29020 : 110.0) no description available & (gnl|cdd|35238 : 84.7) no description available & (reliability: 360.0) & (original description: Putative dal1, Description = MADS-box transcription factor, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00837_319587-322093' '(at2g24840 : 90.9) Encodes a member of the Agamous-like family of transcription factors. Localized to the nucleus in the central cell and endosperm of the female gametophyte. Loss of function mutations show reduced female fertility. Fifty percent of ovules have defective central cells with abnormal morphology and patterns of gene expression. Upon fertilization 50% of seeds abort. Using yeast two hybrid assays AGL61 was shown to interact with AGL80, another MADS box gene with similar defects in ovule development. These data suggest that AGL61 and 80 together are required for proper differentiation of the central cell.; AGAMOUS-like 61 (AGL61); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 62 (TAIR:AT5G60440.1); Has 5781 Blast hits to 5781 proteins in 683 species: Archae - 0; Bacteria - 0; Metazoa - 624; Fungi - 302; Plants - 4788; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|29020 : 89.8) no description available & (reliability: 181.8) & (original description: Putative PGSC0003DMG400042688, Description = Agamous-like MADS-box protein AGL62, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf00953_451072-453719' '(at5g60440 : 174.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29020 : 104.0) no description available & (gnl|cdd|35238 : 91.2) no description available & (reliability: 348.0) & (original description: Putative DIA, Description = MADS-box transcription factor family protein, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf01020_292488-295069' '(at2g24840 : 80.9) Encodes a member of the Agamous-like family of transcription factors. Localized to the nucleus in the central cell and endosperm of the female gametophyte. Loss of function mutations show reduced female fertility. Fifty percent of ovules have defective central cells with abnormal morphology and patterns of gene expression. Upon fertilization 50% of seeds abort. Using yeast two hybrid assays AGL61 was shown to interact with AGL80, another MADS box gene with similar defects in ovule development. These data suggest that AGL61 and 80 together are required for proper differentiation of the central cell.; AGAMOUS-like 61 (AGL61); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 62 (TAIR:AT5G60440.1); Has 5781 Blast hits to 5781 proteins in 683 species: Archae - 0; Bacteria - 0; Metazoa - 624; Fungi - 302; Plants - 4788; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative PGSC0003DMG400037384, Description = , PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf01124_700328-702930' '(at5g60440 : 139.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29020 : 101.0) no description available & (gnl|cdd|35238 : 90.0) no description available & (reliability: 278.0) & (original description: Putative BnaAnng30570D, Description = BnaAnng30570D protein, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf01143_401346-411119' '(q39685|cmb1_diaca : 257.0) MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink) & (at3g02310 : 231.0) MADS-box protein, binds K domain of AG in vivo; SEPALLATA 2 (SEP2); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7363 Blast hits to 7362 proteins in 916 species: Archae - 3; Bacteria - 0; Metazoa - 630; Fungi - 305; Plants - 6350; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|29020 : 119.0) no description available & (gnl|cdd|35238 : 104.0) no description available & (reliability: 456.0) & (original description: Putative CMB1, Description = MADS-box protein CMB1, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf01143_406189-411078' '(at3g02310 : 126.0) MADS-box protein, binds K domain of AG in vivo; SEPALLATA 2 (SEP2); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7363 Blast hits to 7362 proteins in 916 species: Archae - 3; Bacteria - 0; Metazoa - 630; Fungi - 305; Plants - 6350; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (q39685|cmb1_diaca : 125.0) MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|29020 : 111.0) no description available & (gnl|cdd|35238 : 85.8) no description available & (reliability: 250.0) & (original description: Putative dal1, Description = MADS-box transcription factor, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf01226_242833-250142' '(q39295|agl15_brana : 135.0) Agamous-like MADS-box protein AGL15 - Brassica napus (Rape) & (at5g13790 : 132.0) AGL15 (AGAMOUS-Like 15) is a member of the MADS domain family of regulatory factors. Although AGL15 is preferentially expressed during embryogenesis, AGL15 is also expressed in leaf primordia, shoot apical meristems and young floral buds, suggesting that AGL15 may play a role during post-germinative development. Transgenic plants that ectopically express AGL15 show delays in the transition to flowering, perianth abscission and senescence and fruit and seed maturation. Role in embryogenesis and gibberellic acid catabolism. Targets B3 domain transcription factors that are key regulators of embryogenesis.; AGAMOUS-like 15 (AGL15); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 18 (TAIR:AT3G57390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29020 : 126.0) no description available & (gnl|cdd|35238 : 84.7) no description available & (reliability: 264.0) & (original description: Putative MADS9, Description = MADS9, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf01252_123161-131340' '(at1g22130 : 130.0) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL104 is expressed in pollen.It forms heterodimers with other MICK family members (AGL65 and AGL30). Involved in late stages of pollen development and pollen tube growth.; AGAMOUS-like 104 (AGL104); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: pollen development; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 66 (TAIR:AT1G77980.1); Has 6115 Blast hits to 6115 proteins in 750 species: Archae - 0; Bacteria - 0; Metazoa - 621; Fungi - 304; Plants - 5113; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|29020 : 96.4) no description available & (gnl|cdd|35238 : 82.3) no description available & (q6q9i2|mad15_orysa : 81.3) MADS-box transcription factor 15 (OsMADS15) (Protein APETALA1-like A) (FDRMADS3) (RMADS215) - Oryza sativa (Rice) & (reliability: 260.0) & (original description: Putative m7, Description = AGAMOUS-like protein, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf01310_422142-446535' '(q39685|cmb1_diaca : 249.0) MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink) & (at2g03710 : 231.0) This gene belongs to the family of SEP genes. It is involved in the development of sepals, petals, stamens and carpels. Additionally, it plays a central role in the determination of flower meristem and organ identity.; SEPALLATA 4 (SEP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29020 : 129.0) no description available & (gnl|cdd|35238 : 105.0) no description available & (reliability: 462.0) & (original description: Putative MADS8, Description = MADS-box transcription factor 8, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf01310_459378-475076' '(q41276|ap1_sinal : 232.0) Floral homeotic protein APETALA1 (MADS C) - Sinapis alba (White mustard) (Brassica hirta) & (at1g69120 : 223.0) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.; APETALA1 (AP1); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 8031 Blast hits to 8015 proteins in 981 species: Archae - 10; Bacteria - 56; Metazoa - 785; Fungi - 329; Plants - 6623; Viruses - 2; Other Eukaryotes - 226 (source: NCBI BLink). & (gnl|cdd|29020 : 118.0) no description available & (gnl|cdd|35238 : 89.7) no description available & (reliability: 428.0) & (original description: Putative m28, Description = FRUITFULL-like protein, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf01327_151046-182034' '(q40700|mads1_orysa : 137.0) MADS-box transcription factor 1 (OsMADS1) (Protein LEAFY HULL STERILE1) (Protein SEPALLATA-like) - Oryza sativa (Rice) & (at5g65070 : 134.0) Encodes MADS-box containing FLC paralog. Five splice variants have been identified but not characterized with respect to expression patterns and/or differing function. Overexpression of the gene in the Landsberg ecotype leads to a delay in flowering, transcript levels of MAF4 are reduced after a 6 week vernalization.; MADS AFFECTING FLOWERING 4 (MAF4); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G65080.1). & (gnl|cdd|29020 : 109.0) no description available & (gnl|cdd|35238 : 89.7) no description available & (reliability: 268.0) & (original description: Putative AGL31, Description = Agamous-like MADS-box protein AGL31, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf02073_1014291-1020204' '(at4g09960 : 244.0) a MADS box transcription factor expressed in the carpel and ovules; SEEDSTICK (STK); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, ovule development, carpel development; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT2G42830.2). & (q40872|ag_pangi : 231.0) Floral homeotic protein AGAMOUS (GAG2) - Panax ginseng (Korean ginseng) & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 98.9) no description available & (reliability: 488.0) & (original description: Putative AGL11, Description = Agamous-like MADS-box protein AGL11, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf02151_124111-141293' '(q41276|ap1_sinal : 246.0) Floral homeotic protein APETALA1 (MADS C) - Sinapis alba (White mustard) (Brassica hirta) & (at1g69120 : 238.0) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.; APETALA1 (AP1); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 8031 Blast hits to 8015 proteins in 981 species: Archae - 10; Bacteria - 56; Metazoa - 785; Fungi - 329; Plants - 6623; Viruses - 2; Other Eukaryotes - 226 (source: NCBI BLink). & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 101.0) no description available & (reliability: 474.0) & (original description: Putative squa, Description = Squamosa protein, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf02194_125867-152437' '(q6ep49|mad27_orysa : 264.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at4g37940 : 243.0) encodes a MADS box protein, highly expressed in the root.; AGAMOUS-like 21 (AGL21); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 (TAIR:AT2G22630.1); Has 7243 Blast hits to 7239 proteins in 914 species: Archae - 0; Bacteria - 6; Metazoa - 648; Fungi - 305; Plants - 6180; Viruses - 2; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|29020 : 130.0) no description available & (gnl|cdd|35238 : 99.3) no description available & (reliability: 486.0) & (original description: Putative AGL21, Description = Agamous-like MADS-box protein AGL21, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf02348_1239066-1276667' '(q6ep49|mad27_orysa : 243.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at3g57230 : 224.0) MADS-box transcription factor. Expressed in leaf, root and stem, with higher RNA accumulation in guard cells and trichomes.; AGAMOUS-like 16 (AGL16); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, stomatal lineage progression; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 21 (TAIR:AT4G37940.1); Has 7191 Blast hits to 7190 proteins in 917 species: Archae - 0; Bacteria - 14; Metazoa - 643; Fungi - 316; Plants - 6129; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). & (gnl|cdd|29020 : 128.0) no description available & (gnl|cdd|35238 : 95.1) no description available & (reliability: 448.0) & (original description: Putative MADS27, Description = MADS-box transcription factor 27, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf02361_253155-270078' '(at2g45660 : 157.0) Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.; AGAMOUS-like 20 (AGL20); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to cold, positive regulation of flower development, maintenance of inflorescence meristem identity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 42 (TAIR:AT5G62165.3); Has 7364 Blast hits to 7361 proteins in 926 species: Archae - 0; Bacteria - 16; Metazoa - 673; Fungi - 316; Plants - 6262; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (q9xj60|mad50_orysa : 157.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|29020 : 115.0) no description available & (gnl|cdd|35238 : 84.3) no description available & (reliability: 314.0) & (original description: Putative dal3, Description = MADS-box transcription factor, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf02452_676861-690023' '(q9ate5|fbp24_pethy : 333.0) MADS-box protein FBP24 (Floral-binding protein 24) - Petunia hybrida (Petunia) & (at5g23260 : 174.0) Encodes a MADS box protein. Regulates proanthocyanidin biosynthesis in the inner-most cell layer of the seed coat. Also controls cell shape of the inner-most cell layer of the seed coat. Also shown to be necessary for determining the identity of the endothelial layer within the ovule. Paralogous to GOA.; TRANSPARENT TESTA16 (TT16); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of cell shape, regulation of proanthocyanidin biosynthetic process, seed development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 15 (TAIR:AT5G13790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29020 : 128.0) no description available & (gnl|cdd|35238 : 89.7) no description available & (reliability: 348.0) & (original description: Putative FBP24, Description = MADS-box protein FBP24, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf02909_370801-374366' '(at5g48670 : 124.0) AGL80 is a member of the MADS box family of genes. AGL80 functions as a transcription factor within the central cell gene regulatory network and controls the expression of downstream genes required for central cell development and function.; AGAMOUS-like 80 (AGL80); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: central cell, endosperm; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT5G27810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35238 : 99.7) no description available & (gnl|cdd|29021 : 93.4) no description available & (reliability: 248.0) & (original description: Putative PHE1, Description = Agamous-like MADS-box protein AGL80, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf03048_626173-628712' '(at2g24840 : 81.3) Encodes a member of the Agamous-like family of transcription factors. Localized to the nucleus in the central cell and endosperm of the female gametophyte. Loss of function mutations show reduced female fertility. Fifty percent of ovules have defective central cells with abnormal morphology and patterns of gene expression. Upon fertilization 50% of seeds abort. Using yeast two hybrid assays AGL61 was shown to interact with AGL80, another MADS box gene with similar defects in ovule development. These data suggest that AGL61 and 80 together are required for proper differentiation of the central cell.; AGAMOUS-like 61 (AGL61); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 62 (TAIR:AT5G60440.1); Has 5781 Blast hits to 5781 proteins in 683 species: Archae - 0; Bacteria - 0; Metazoa - 624; Fungi - 302; Plants - 4788; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative PGSC0003DMG400037384, Description = BnaC04g37430D protein, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf03171_108718-111428' '(at5g48670 : 196.0) AGL80 is a member of the MADS box family of genes. AGL80 functions as a transcription factor within the central cell gene regulatory network and controls the expression of downstream genes required for central cell development and function.; AGAMOUS-like 80 (AGL80); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: central cell, endosperm; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT5G27810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35238 : 104.0) no description available & (gnl|cdd|29021 : 100.0) no description available & (reliability: 392.0) & (original description: Putative PHE2, Description = Pheres2, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf03273_106759-118569' '(at1g71692 : 229.0) Encodes a member of the MADS box family of transcription factors. Involved in root cell differentiation and flowering time. Loss of function mutations have abnormal cellular differentiation in the roots and are late flowering. AGL12 along with AGL14, and AGL17 is preferentially expressed in root tissues and represent the only characterized MADS box genes expressed in roots.; AGAMOUS-like 12 (AGL12); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, root development; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT3G58780.1); Has 6551 Blast hits to 6549 proteins in 840 species: Archae - 0; Bacteria - 0; Metazoa - 621; Fungi - 300; Plants - 5564; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (q8l887|mad26_orysa : 214.0) MADS-box transcription factor 26 (OsMADS26) (FDRMADS3) (RMADS220) - Oryza sativa (Rice) & (gnl|cdd|29020 : 115.0) no description available & (gnl|cdd|35238 : 94.7) no description available & (reliability: 458.0) & (original description: Putative AGL12, Description = Agamous-like MADS-box protein AGL12, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf03350_278998-293185' '(at4g09960 : 219.0) a MADS box transcription factor expressed in the carpel and ovules; SEEDSTICK (STK); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, ovule development, carpel development; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT2G42830.2). & (q40872|ag_pangi : 203.0) Floral homeotic protein AGAMOUS (GAG2) - Panax ginseng (Korean ginseng) & (gnl|cdd|29020 : 126.0) no description available & (gnl|cdd|35238 : 90.0) no description available & (reliability: 438.0) & (original description: Putative fbp11, Description = Fbp11 protein, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf03376_325458-328026' '(at5g60440 : 100.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative PGSC0003DMG400043633, Description = Transcription factor, MADS-box, PFAM = )' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf03376_325476-327966' '(at5g60440 : 105.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative PGSC0003DMG400005131, Description = Mads box protein, putative, PFAM = )' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf03488_1200493-1216784' '(at5g65060 : 134.0) MADS domain protein - flowering regulator that is closely related to FLC; MADS AFFECTING FLOWERING 3 (MAF3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: negative regulation of flower development, regulation of transcription, DNA-dependent, vernalization response; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 31 (TAIR:AT5G65050.3); Has 6499 Blast hits to 6487 proteins in 808 species: Archae - 0; Bacteria - 0; Metazoa - 619; Fungi - 301; Plants - 5512; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (q7xun2|mad17_orysa : 133.0) MADS-box transcription factor 17 (OsMADS17) (NMADS3) (RMADS213) - Oryza sativa (Rice) & (gnl|cdd|29020 : 110.0) no description available & (gnl|cdd|35238 : 88.9) no description available & (reliability: 268.0) & (original description: Putative AGL31, Description = Agamous-like MADS-box protein AGL31, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf04021_194317-232245' '(at2g45660 : 179.0) Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.; AGAMOUS-like 20 (AGL20); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to cold, positive regulation of flower development, maintenance of inflorescence meristem identity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 42 (TAIR:AT5G62165.3); Has 7364 Blast hits to 7361 proteins in 926 species: Archae - 0; Bacteria - 16; Metazoa - 673; Fungi - 316; Plants - 6262; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (q9xj60|mad50_orysa : 160.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|29020 : 127.0) no description available & (gnl|cdd|35238 : 98.1) no description available & (reliability: 358.0) & (original description: Putative soc1, Description = MADS-box transcription factor, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf04053_4902-7899' '(at5g60440 : 102.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29020 : 95.6) no description available & (gnl|cdd|35238 : 82.0) no description available & (reliability: 204.0) & (original description: Putative AGL29, Description = MADS-box transcription factor family protein, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf04995_963953-968510' '(at1g22130 : 167.0) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL104 is expressed in pollen.It forms heterodimers with other MICK family members (AGL65 and AGL30). Involved in late stages of pollen development and pollen tube growth.; AGAMOUS-like 104 (AGL104); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: pollen development; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 66 (TAIR:AT1G77980.1); Has 6115 Blast hits to 6115 proteins in 750 species: Archae - 0; Bacteria - 0; Metazoa - 621; Fungi - 304; Plants - 5113; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 96.6) no description available & (q8ru31|mad21_orysa : 93.6) MADS-box transcription factor 21 (OsMADS21) (RMADS207) - Oryza sativa (Rice) & (reliability: 334.0) & (original description: Putative Md, Description = Md, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf05483_759579-774893' '(q6ep49|mad27_orysa : 209.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at4g37940 : 197.0) encodes a MADS box protein, highly expressed in the root.; AGAMOUS-like 21 (AGL21); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 (TAIR:AT2G22630.1); Has 7243 Blast hits to 7239 proteins in 914 species: Archae - 0; Bacteria - 6; Metazoa - 648; Fungi - 305; Plants - 6180; Viruses - 2; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|29020 : 116.0) no description available & (gnl|cdd|35238 : 93.9) no description available & (reliability: 394.0) & (original description: Putative MADS27, Description = MADS-box transcription factor 27, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf05552_510506-612765' '(at5g62165 : 176.0) Encodes a MADS box transcription factor. Expressed in quiescent center.; AGAMOUS-like 42 (AGL42); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 71 (TAIR:AT5G51870.1). & (q9xj60|mad50_orysa : 168.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|29020 : 121.0) no description available & (gnl|cdd|35238 : 93.9) no description available & (reliability: 352.0) & (original description: Putative AGL42, Description = MADS-box protein AGL42, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf05552_594249-598120' '(gnl|cdd|29020 : 122.0) no description available & (at2g45660 : 116.0) Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.; AGAMOUS-like 20 (AGL20); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to cold, positive regulation of flower development, maintenance of inflorescence meristem identity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 42 (TAIR:AT5G62165.3); Has 7364 Blast hits to 7361 proteins in 926 species: Archae - 0; Bacteria - 16; Metazoa - 673; Fungi - 316; Plants - 6262; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (q9xj60|mad50_orysa : 115.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|35238 : 92.7) no description available & (reliability: 232.0) & (original description: Putative dal3, Description = Suppressor of overexpression of constans 1, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf05588_1257154-1273727' '(at3g49400 : 655.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781). & (reliability: 1310.0) & (original description: Putative PGSC0003DMG400005917, Description = Transducin/WD40 repeat protein, PFAM = PF00400;PF00400;PF12657)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf05618_522549-546653' '(at3g02310 : 221.0) MADS-box protein, binds K domain of AG in vivo; SEPALLATA 2 (SEP2); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7363 Blast hits to 7362 proteins in 916 species: Archae - 3; Bacteria - 0; Metazoa - 630; Fungi - 305; Plants - 6350; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (o65874|mtf1_pea : 215.0) MADS-box transcription factor 1 - Pisum sativum (Garden pea) & (gnl|cdd|29020 : 123.0) no description available & (gnl|cdd|35238 : 102.0) no description available & (reliability: 442.0) & (original description: Putative otg7, Description = MADS box protein DOMADS1, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf05620_225763-264338' '(q39685|cmb1_diaca : 265.0) MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink) & (at5g15800 : 239.0) Encodes a MADS box transcription factor involved flower and ovule development. Functionally redundant with SEP2 and SEP3.; SEPALLATA1 (SEP1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT3G02310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29020 : 126.0) no description available & (gnl|cdd|35238 : 106.0) no description available & (reliability: 478.0) & (original description: Putative CMB1, Description = MADS-box protein CMB1, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf05620_225766-261813' '(q39685|cmb1_diaca : 260.0) MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink) & (at3g02310 : 249.0) MADS-box protein, binds K domain of AG in vivo; SEPALLATA 2 (SEP2); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7363 Blast hits to 7362 proteins in 916 species: Archae - 3; Bacteria - 0; Metazoa - 630; Fungi - 305; Plants - 6350; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|29020 : 127.0) no description available & (gnl|cdd|35238 : 106.0) no description available & (reliability: 496.0) & (original description: Putative 37135, Description = Developmental protein SEPALLATA 1, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf05824_797119-799841' '(at5g60440 : 167.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29020 : 105.0) no description available & (gnl|cdd|35238 : 101.0) no description available & (reliability: 334.0) & (original description: Putative BnaA01g25970D, Description = BnaA01g25970D protein, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf06076_76246-83178' '(q42429|agl8_soltu : 239.0) Agamous-like MADS-box protein AGL8 homolog (POTM1-1) - Solanum tuberosum (Potato) & (at1g69120 : 232.0) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.; APETALA1 (AP1); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 8031 Blast hits to 8015 proteins in 981 species: Archae - 10; Bacteria - 56; Metazoa - 785; Fungi - 329; Plants - 6623; Viruses - 2; Other Eukaryotes - 226 (source: NCBI BLink). & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 102.0) no description available & (reliability: 430.0) & (original description: Putative m4, Description = FRUITFULL-like protein, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf06076_76859-81626' '(at1g69120 : 179.0) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.; APETALA1 (AP1); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 8031 Blast hits to 8015 proteins in 981 species: Archae - 10; Bacteria - 56; Metazoa - 785; Fungi - 329; Plants - 6623; Viruses - 2; Other Eukaryotes - 226 (source: NCBI BLink). & (q41276|ap1_sinal : 174.0) Floral homeotic protein APETALA1 (MADS C) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|29020 : 104.0) no description available & (reliability: 332.0) & (original description: Putative m15, Description = FRUITFULL-like protein, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf06094_2350-6956' '(at1g77980 : 106.0) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL66 is expressed in pollen.It forms heterodimers with other MICK family members (AGL104). Involved in late stages of pollen development and pollen tube growth.; AGAMOUS-like 66 (AGL66); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, pollen development; LOCATED IN: nucleus; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 104 (TAIR:AT1G22130.1); Has 6165 Blast hits to 6165 proteins in 753 species: Archae - 0; Bacteria - 2; Metazoa - 622; Fungi - 302; Plants - 5159; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|29020 : 90.2) no description available & (reliability: 212.0) & (original description: Putative m3, Description = Putative MADS-domain transcription factor, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf06094_2377-6890' '(at1g77980 : 103.0) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL66 is expressed in pollen.It forms heterodimers with other MICK family members (AGL104). Involved in late stages of pollen development and pollen tube growth.; AGAMOUS-like 66 (AGL66); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, pollen development; LOCATED IN: nucleus; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 104 (TAIR:AT1G22130.1); Has 6165 Blast hits to 6165 proteins in 753 species: Archae - 0; Bacteria - 2; Metazoa - 622; Fungi - 302; Plants - 5159; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|29020 : 90.2) no description available & (reliability: 206.0) & (original description: Putative m3, Description = Putative MADS-domain transcription factor, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf06156_498918-509772' '(at5g60440 : 149.0) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29020 : 105.0) no description available & (gnl|cdd|35238 : 89.3) no description available & (reliability: 298.0) & (original description: Putative DIA, Description = MADS-box transcription factor family protein, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf06493_151433-160782' '(at1g69120 : 217.0) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.; APETALA1 (AP1); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 8031 Blast hits to 8015 proteins in 981 species: Archae - 10; Bacteria - 56; Metazoa - 785; Fungi - 329; Plants - 6623; Viruses - 2; Other Eukaryotes - 226 (source: NCBI BLink). & (q41276|ap1_sinal : 216.0) Floral homeotic protein APETALA1 (MADS C) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|29020 : 119.0) no description available & (gnl|cdd|35238 : 100.0) no description available & (reliability: 394.0) & (original description: Putative AGL8, Description = Agamous-like MADS-box protein AGL8, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf06517_4919-44759' '(q6ep49|mad27_orysa : 134.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at2g14210 : 131.0) MADS box gene, transcription factor; AGAMOUS-like 44 (AGL44); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to nutrient, lateral root development; LOCATED IN: nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 21 (TAIR:AT4G37940.1); Has 7244 Blast hits to 7231 proteins in 902 species: Archae - 0; Bacteria - 10; Metazoa - 640; Fungi - 309; Plants - 6146; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (gnl|cdd|29020 : 126.0) no description available & (gnl|cdd|35238 : 94.3) no description available & (reliability: 262.0) & (original description: Putative MADS26, Description = MADS transcription factor, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf06560_87943-96831' '(q42429|agl8_soltu : 236.0) Agamous-like MADS-box protein AGL8 homolog (POTM1-1) - Solanum tuberosum (Potato) & (at1g69120 : 235.0) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.; APETALA1 (AP1); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 8031 Blast hits to 8015 proteins in 981 species: Archae - 10; Bacteria - 56; Metazoa - 785; Fungi - 329; Plants - 6623; Viruses - 2; Other Eukaryotes - 226 (source: NCBI BLink). & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 104.0) no description available & (reliability: 454.0) & (original description: Putative FUL1, Description = Fruitful 1, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf06825_486685-505912' '(q6eu39|mads6_orysa : 132.0) MADS-box transcription factor 6 (OsMADS6) - Oryza sativa (Rice) & (at2g45650 : 130.0) sequence suggests this encodes a MADS-box transcription factor; AGAMOUS-like 6 (AGL6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, floral organ development; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 13 (TAIR:AT3G61120.1); Has 7294 Blast hits to 7293 proteins in 914 species: Archae - 0; Bacteria - 0; Metazoa - 630; Fungi - 307; Plants - 6281; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|29020 : 112.0) no description available & (gnl|cdd|35238 : 89.3) no description available & (reliability: 260.0) & (original description: Putative defh7, Description = Putative MADS-domain transcription factor DEFH7, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf07207_12768-15202' '(gnl|cdd|29020 : 99.8) no description available & (at2g24840 : 96.7) Encodes a member of the Agamous-like family of transcription factors. Localized to the nucleus in the central cell and endosperm of the female gametophyte. Loss of function mutations show reduced female fertility. Fifty percent of ovules have defective central cells with abnormal morphology and patterns of gene expression. Upon fertilization 50% of seeds abort. Using yeast two hybrid assays AGL61 was shown to interact with AGL80, another MADS box gene with similar defects in ovule development. These data suggest that AGL61 and 80 together are required for proper differentiation of the central cell.; AGAMOUS-like 61 (AGL61); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 62 (TAIR:AT5G60440.1); Has 5781 Blast hits to 5781 proteins in 683 species: Archae - 0; Bacteria - 0; Metazoa - 624; Fungi - 302; Plants - 4788; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative DIA, Description = MADS-box transcription factor family protein, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf07242_583004-588201' '(at1g22130 : 153.0) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL104 is expressed in pollen.It forms heterodimers with other MICK family members (AGL65 and AGL30). Involved in late stages of pollen development and pollen tube growth.; AGAMOUS-like 104 (AGL104); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: pollen development; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 66 (TAIR:AT1G77980.1); Has 6115 Blast hits to 6115 proteins in 750 species: Archae - 0; Bacteria - 0; Metazoa - 621; Fungi - 304; Plants - 5113; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 97.0) no description available & (o65874|mtf1_pea : 95.9) MADS-box transcription factor 1 - Pisum sativum (Garden pea) & (reliability: 306.0) & (original description: Putative Md, Description = Md, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf09778_81224-129574' '(at2g45660 : 167.0) Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.; AGAMOUS-like 20 (AGL20); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to cold, positive regulation of flower development, maintenance of inflorescence meristem identity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 42 (TAIR:AT5G62165.3); Has 7364 Blast hits to 7361 proteins in 926 species: Archae - 0; Bacteria - 16; Metazoa - 673; Fungi - 316; Plants - 6262; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (q9xj60|mad50_orysa : 144.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 91.2) no description available & (reliability: 334.0) & (original description: Putative TDR3, Description = TDR3 protein, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf09778_81230-130230' '(at2g45660 : 190.0) Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.; AGAMOUS-like 20 (AGL20); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to cold, positive regulation of flower development, maintenance of inflorescence meristem identity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 42 (TAIR:AT5G62165.3); Has 7364 Blast hits to 7361 proteins in 926 species: Archae - 0; Bacteria - 16; Metazoa - 673; Fungi - 316; Plants - 6262; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (q9xj60|mad50_orysa : 164.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 97.4) no description available & (reliability: 380.0) & (original description: Putative soc1, Description = MADS-box transcription factor, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf10287_208676-211200' '(gnl|cdd|29020 : 89.0) no description available & (at5g60440 : 85.5) AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.; AGAMOUS-like 62 (AGL62); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellularization of endosperm, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT4G36590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative PGSC0003DMG400044761, Description = MADS-box protein AGL74, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf13572_15497-37083' '(at3g02310 : 240.0) MADS-box protein, binds K domain of AG in vivo; SEPALLATA 2 (SEP2); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7363 Blast hits to 7362 proteins in 916 species: Archae - 3; Bacteria - 0; Metazoa - 630; Fungi - 305; Plants - 6350; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (q03489|agl9_pethy : 231.0) Agamous-like MADS-box protein AGL9 homolog (Floral homeotic protein FBP2) (Floral-binding protein 2) - Petunia hybrida (Petunia) & (gnl|cdd|29020 : 124.0) no description available & (gnl|cdd|35238 : 101.0) no description available & (reliability: 468.0) & (original description: Putative 37500, Description = Developmental protein SEPALLATA 2, PFAM = PF01486;PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf16022_302844-319443' '(q9xj60|mad50_orysa : 184.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (at4g22950 : 182.0) MADS-box protein AGL19; AGAMOUS-like 19 (AGL19); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 14 (TAIR:AT4G11880.1); Has 7291 Blast hits to 7288 proteins in 921 species: Archae - 2; Bacteria - 15; Metazoa - 646; Fungi - 323; Plants - 6182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|29020 : 124.0) no description available & (gnl|cdd|35238 : 94.7) no description available & (reliability: 364.0) & (original description: Putative MADS50, Description = MADS-box transcription factor 50, PFAM = PF00319;PF01486)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf18182_49991-61025' '(at2g03060 : 145.0) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL30 is expressed in pollen.It forms heterodimers with other MICK family members.; AGAMOUS-like 30 (AGL30); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: pollen development; LOCATED IN: nucleus; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 65 (TAIR:AT1G18750.1); Has 6155 Blast hits to 6155 proteins in 757 species: Archae - 0; Bacteria - 0; Metazoa - 616; Fungi - 313; Plants - 5146; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative Mads1, Description = MADS box protein, PFAM = PF00319)' T '27.3.24' 'RNA.regulation of transcription.MADS box transcription factor family' 'niben101scf31210_6171-10778' '(q6ep49|mad27_orysa : 127.0) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (at4g37940 : 119.0) encodes a MADS box protein, highly expressed in the root.; AGAMOUS-like 21 (AGL21); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 (TAIR:AT2G22630.1); Has 7243 Blast hits to 7239 proteins in 914 species: Archae - 0; Bacteria - 6; Metazoa - 648; Fungi - 305; Plants - 6180; Viruses - 2; Other Eukaryotes - 102 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative mads2, Description = MADS-box transcription factor 27, PFAM = PF01486)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold513_1-21873' '(at2g32460 : 211.0) Member of the R2R3 factor gene family.; myb domain protein 101 (MYB101); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 33 (TAIR:AT5G06100.3); Has 8826 Blast hits to 8366 proteins in 480 species: Archae - 0; Bacteria - 10; Metazoa - 663; Fungi - 452; Plants - 5861; Viruses - 5; Other Eukaryotes - 1835 (source: NCBI BLink). & (p93417|gam1_orysa : 204.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|35271 : 177.0) no description available & (reliability: 422.0) & (original description: Putative mybAS2, Description = Anther-specific myb-related protein 2, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold964_2527-6388' '(at5g15310 : 285.0) Member of the R2R3 factor gene family.; myb domain protein 16 (MYB16); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 106 (TAIR:AT3G01140.1); Has 8674 Blast hits to 8179 proteins in 471 species: Archae - 0; Bacteria - 0; Metazoa - 652; Fungi - 457; Plants - 5850; Viruses - 4; Other Eukaryotes - 1711 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 204.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 198.0) no description available & (reliability: 570.0) & (original description: Putative myb27, Description = MYB27 protein, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold1726_387-9169' '(at1g09710 : 211.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G58220.1). & (reliability: 422.0) & (original description: Putative MTR_8g024690, Description = Myb-like DNA-binding domain protein, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold2304_48638-52566' '(at1g16490 : 214.0) Member of the R2R3 factor gene family.; myb domain protein 58 (MYB58); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 63 (TAIR:AT1G79180.1); Has 8863 Blast hits to 8152 proteins in 473 species: Archae - 0; Bacteria - 3; Metazoa - 752; Fungi - 456; Plants - 5848; Viruses - 6; Other Eukaryotes - 1798 (source: NCBI BLink). & (p20024|myb1_maize : 208.0) Myb-related protein Zm1 - Zea mays (Maize) & (gnl|cdd|35271 : 182.0) no description available & (reliability: 428.0) & (original description: Putative myb1, Description = Myb-related transcription factor LBM3, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold2366_67543-71228' '(at5g62470 : 284.0) Encodes a R2R3 type Myb transcription factor whose expression is strongly induced by abscisic acid. Mediates abscisic acid signaling during drought stress response.; myb domain protein 96 (MYB96); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 94 (TAIR:AT3G47600.1); Has 9691 Blast hits to 8398 proteins in 583 species: Archae - 0; Bacteria - 56; Metazoa - 899; Fungi - 554; Plants - 5844; Viruses - 4; Other Eukaryotes - 2334 (source: NCBI BLink). & (p20024|myb1_maize : 182.0) Myb-related protein Zm1 - Zea mays (Maize) & (gnl|cdd|35271 : 177.0) no description available & (reliability: 568.0) & (original description: Putative mybys, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold5538_42426-46288' '(at3g60460 : 211.0) Encodes an R2R3 myb transcription factor that is required for male gamete formation, specifically for entry of the generative cell into mitosis. Specifically expressed in the male germline.; DUO POLLEN 1 (DUO1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 97 (TAIR:AT4G26930.1); Has 8477 Blast hits to 7784 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 778; Fungi - 457; Plants - 5496; Viruses - 3; Other Eukaryotes - 1743 (source: NCBI BLink). & (gnl|cdd|35271 : 145.0) no description available & (p93417|gam1_orysa : 133.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (reliability: 422.0) & (original description: Putative B25, Description = Putative uncharacterized protein B25, PFAM = PF13921;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold8619_1-2665' '(at2g31180 : 167.0) Member of the R2R3 factor gene family.; myb domain protein 14 (MYB14); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 8955 Blast hits to 8193 proteins in 476 species: Archae - 0; Bacteria - 0; Metazoa - 819; Fungi - 463; Plants - 5874; Viruses - 6; Other Eukaryotes - 1793 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 166.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 154.0) no description available & (reliability: 334.0) & (original description: Putative MYB72, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold9845_1-3311' '(at2g36890 : 228.0) "Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB38, regulates axillary meristem formation. "; REGULATOR OF AXILLARY MERISTEMS 2 (RAX2); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 37 (TAIR:AT5G23000.1); Has 8785 Blast hits to 8145 proteins in 459 species: Archae - 0; Bacteria - 0; Metazoa - 710; Fungi - 476; Plants - 5916; Viruses - 4; Other Eukaryotes - 1679 (source: NCBI BLink). & (gnl|cdd|35271 : 172.0) no description available & (q7xbh4|myb4_orysa : 171.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 456.0) & (original description: Putative myb, Description = Transcription factor RAX3, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold10768_44858-47731' '(at4g37260 : 176.0) Member of the R2R3 factor gene family.; myb domain protein 73 (MYB73); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 70 (TAIR:AT2G23290.1); Has 8844 Blast hits to 7889 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 797; Fungi - 643; Plants - 5365; Viruses - 3; Other Eukaryotes - 2036 (source: NCBI BLink). & (gnl|cdd|35271 : 155.0) no description available & (p93417|gam1_orysa : 107.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 89.7) no description available & (reliability: 352.0) & (original description: Putative myb11, Description = R2r3-myb transcription factor, putative, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold11745_8078-11629' '(at4g39250 : 101.0) RAD-like 1 (RL1); CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G21650.1); Has 592 Blast hits to 591 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 0; Plants - 470; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative fsm1, Description = SANT/MYB domain protein, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold13346_40332-42804' '(at2g37630 : 159.0) Encodes a MYB-domain protein involved in specification of the leaf proximodistal axis. Mutation results in lobed and dissected leaves with a characteristic asymmetry. Homologous to the Antirrhinum PHANTASTICA (PHAN) and maize ROUGH SHEATH2 (RS2) genes Asymmetric placement of auxin response at the distal leaf tip precedes visible asymmetric leaf growth. Acts alongside AXR1 to exclude BP expression in leaves and with PIN1 to repress BP and promote lateral organ growth. Interacts physically with AS2 to form a complex that binds to the BP promoter and silences BP. Also functions as a regulator of the plant immune response.; ASYMMETRIC LEAVES 1 (AS1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 113 (TAIR:AT1G66370.1); Has 8693 Blast hits to 7877 proteins in 569 species: Archae - 0; Bacteria - 8; Metazoa - 942; Fungi - 511; Plants - 5476; Viruses - 6; Other Eukaryotes - 1750 (source: NCBI BLink). & (gnl|cdd|35271 : 111.0) no description available & (p93417|gam1_orysa : 90.1) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (reliability: 318.0) & (original description: Putative phan, Description = MYB-related transcription factor, PFAM = PF13921)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold14289_8903-12685' '(at3g53200 : 157.0) Member of the R2R3 factor gene family.; myb domain protein 27 (MYB27); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 48 (TAIR:AT3G46130.1); Has 8985 Blast hits to 8213 proteins in 491 species: Archae - 0; Bacteria - 0; Metazoa - 826; Fungi - 465; Plants - 5890; Viruses - 5; Other Eukaryotes - 1799 (source: NCBI BLink). & (q4jl76|myba2_orysa : 156.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (gnl|cdd|35271 : 149.0) no description available & (reliability: 314.0) & (original description: Putative MYB20, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold15687_26671-30481' '(at5g57620 : 225.0) Encodes a putative transcription factor (MYB36).; myb domain protein 36 (MYB36); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 68 (TAIR:AT5G65790.1); Has 9119 Blast hits to 8411 proteins in 472 species: Archae - 0; Bacteria - 0; Metazoa - 823; Fungi - 478; Plants - 5914; Viruses - 3; Other Eukaryotes - 1901 (source: NCBI BLink). & (p20025|myb38_maize : 171.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 169.0) no description available & (reliability: 450.0) & (original description: Putative BLIND, Description = BLIND, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold16129_34440-37605' '(at3g12720 : 238.0) Member of the R2R3 factor gene family.; myb domain protein 67 (MYB67); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 50 (TAIR:AT1G57560.1); Has 8912 Blast hits to 8278 proteins in 476 species: Archae - 0; Bacteria - 2; Metazoa - 680; Fungi - 532; Plants - 5859; Viruses - 3; Other Eukaryotes - 1836 (source: NCBI BLink). & (p20027|myb3_horvu : 209.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 185.0) no description available & (reliability: 476.0) & (original description: Putative MS35, Description = Transcription factor MYB86, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold17163_17054-21502' '(at2g02060 : 113.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G14600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative BnaA02g21100D, Description = BnaA02g21100D protein, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold18366_31687-35561' '(at2g47460 : 201.0) "MYB12 belongs to subgroup 7 of the R2R3-MYB family. It strongly activates the promoters of chalcone synthase (CHS), flavanone 3-hydroxylase (F3H), flavonol synthase (FLS) and - to a lesser extent - chalcone flavanone isomerase (CHI), but cannot activate the promoters of flavonoid-3'hydroxylase (F3'H) and dihydroflavonol 4-reductase (DF). The activation requires a functional MYB recognition element (MRE). Results from the myb12-1f allele indicate that an activation domain might be present in the C-terminus. Overexpression or knock-out plants do not show any obvious phenotype under greenhouse conditions. Young myb12-ko seedlings contain reduced amounts of flavonoids (quercetin and kaempferol), while seedlings as well as leaves of MYB12-OX plants displayed an increased flavonoid content. They did not show any significant difference in anthocyanin content. Expression of CHS and FLS shows a clear correlation to MYB12 expression levels. CHI and F3H show increased transcript levels in the MYB12-OX lines, but no differences in the knock-out. Even in the absence of functional MYB12, flavonol biosynthesis is not completely absent, suggesting functional redundancy. " The redundant factors are MYB11 and MYB111 although MYB12 is primarily required for flavonol biosynthesis in roots.; myb domain protein 12 (MYB12); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 11 (TAIR:AT3G62610.1); Has 8833 Blast hits to 8133 proteins in 470 species: Archae - 0; Bacteria - 0; Metazoa - 786; Fungi - 423; Plants - 5965; Viruses - 6; Other Eukaryotes - 1653 (source: NCBI BLink). & (p27898|mybp_maize : 200.0) Myb-related protein P - Zea mays (Maize) & (gnl|cdd|35271 : 155.0) no description available & (reliability: 402.0) & (original description: Putative MYB12, Description = MYB12, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold18801_1-5735' '(at5g42630 : 182.0) Encodes a member of the KANADI family of putative transcription factors. Involved in integument formation during ovule development and expressed at the boundary between the inner and outer integuments. It is essential for directing laminar growth of the inner integument.Along with KAN1 and KAN2, KAN4 is involved in proper localization of PIN1 in early embryogenesis.; ABERRANT TESTA SHAPE (ATS); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G32240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative KAN4, Description = Probable transcription factor KAN4, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold19798_29343-32705' '(at1g75250 : 110.0) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative RL6, Description = Protein RADIALIS-like 6, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold19841_1-5043' '(at5g42630 : 173.0) Encodes a member of the KANADI family of putative transcription factors. Involved in integument formation during ovule development and expressed at the boundary between the inner and outer integuments. It is essential for directing laminar growth of the inner integument.Along with KAN1 and KAN2, KAN4 is involved in proper localization of PIN1 in early embryogenesis.; ABERRANT TESTA SHAPE (ATS); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G32240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative kan1, Description = Putative Myb family transcription factor At1g14600 family, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold20241_1-3229' '(at5g16770 : 228.0) Member of the R2R3 factor gene family.; myb domain protein 9 (MYB9); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb domain protein 107 (TAIR:AT3G02940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p20025|myb38_maize : 202.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 197.0) no description available & (reliability: 456.0) & (original description: Putative MYB101, Description = Transcription factor MYB101, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold20346_33549-40646' '(at3g55730 : 276.0) putative transcription factor MYB109 (MYB109) mRNA,; myb domain protein 109 (MYB109); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 25 (TAIR:AT2G39880.1); Has 8907 Blast hits to 7929 proteins in 513 species: Archae - 0; Bacteria - 2; Metazoa - 870; Fungi - 593; Plants - 5452; Viruses - 6; Other Eukaryotes - 1984 (source: NCBI BLink). & (gnl|cdd|35271 : 157.0) no description available & (q4jl76|myba2_orysa : 108.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (gnl|cdd|34748 : 96.6) no description available & (reliability: 552.0) & (original description: Putative myb7, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold22028_9440-12015' '(q7xbh4|myb4_orysa : 154.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (at3g23250 : 152.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35271 : 152.0) no description available & (reliability: 304.0) & (original description: Putative myb, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold22028_9473-12135' '(at4g21440 : 151.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 147.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 146.0) no description available & (reliability: 302.0) & (original description: Putative lbm1, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold23195_18934-23011' '(at1g25360 : 507.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 48992 Blast hits to 14461 proteins in 282 species: Archae - 2; Bacteria - 7; Metazoa - 148; Fungi - 100; Plants - 48130; Viruses - 0; Other Eukaryotes - 605 (source: NCBI BLink). & (q76c99|rf1_orysa : 90.5) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1014.0) & (original description: Putative At1g25360, Description = Putative ovule protein, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF14432;PF13041;PF13041)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold24378_4319-8643' '(at3g60460 : 198.0) Encodes an R2R3 myb transcription factor that is required for male gamete formation, specifically for entry of the generative cell into mitosis. Specifically expressed in the male germline.; DUO POLLEN 1 (DUO1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 97 (TAIR:AT4G26930.1); Has 8477 Blast hits to 7784 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 778; Fungi - 457; Plants - 5496; Viruses - 3; Other Eukaryotes - 1743 (source: NCBI BLink). & (gnl|cdd|35271 : 150.0) no description available & (p93417|gam1_orysa : 130.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 80.0) no description available & (reliability: 396.0) & (original description: Putative MYB96, Description = MYB-related transcription factor, PFAM = PF13921;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold25125_3593-7191' '(at5g62470 : 290.0) Encodes a R2R3 type Myb transcription factor whose expression is strongly induced by abscisic acid. Mediates abscisic acid signaling during drought stress response.; myb domain protein 96 (MYB96); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 94 (TAIR:AT3G47600.1); Has 9691 Blast hits to 8398 proteins in 583 species: Archae - 0; Bacteria - 56; Metazoa - 899; Fungi - 554; Plants - 5844; Viruses - 4; Other Eukaryotes - 2334 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 193.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 179.0) no description available & (reliability: 580.0) & (original description: Putative MYB306, Description = Myb-related protein 306, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold25829_309-6767' '(at2g02060 : 117.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G14600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative MYBR14, Description = MYBR domain class transcription factor, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold29757_14037-25046' '(at3g18100 : 454.0) Member of the R2R3 transcription factor gene family.; myb domain protein 4r1 (MYB4R1); CONTAINS InterPro DOMAIN/s: MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-3 (TAIR:AT3G09370.2). & (gnl|cdd|35272 : 159.0) no description available & (reliability: 908.0) & (original description: Putative BnaC01g12000D, Description = BnaC01g12000D protein, PFAM = PF00249;PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold32376_18581-22711' '(at2g32460 : 214.0) Member of the R2R3 factor gene family.; myb domain protein 101 (MYB101); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 33 (TAIR:AT5G06100.3); Has 8826 Blast hits to 8366 proteins in 480 species: Archae - 0; Bacteria - 10; Metazoa - 663; Fungi - 452; Plants - 5861; Viruses - 5; Other Eukaryotes - 1835 (source: NCBI BLink). & (p93417|gam1_orysa : 209.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|35271 : 179.0) no description available & (reliability: 428.0) & (original description: Putative myb1, Description = MYB1, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold32749_15372-23363' '(at5g02320 : 365.0) Encodes a putative c-MYB-like transcription factor of the MYB3R factor gene family (MYB3R5).; myb domain protein 3r-5 (MYB3R-5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-3 (TAIR:AT3G09370.1). & (gnl|cdd|35271 : 160.0) no description available & (p93417|gam1_orysa : 110.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 98.9) no description available & (reliability: 730.0) & (original description: Putative myb, Description = MYB transcription factor R3 type, PFAM = PF00249;PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold33827_3950-14406' '(at1g34670 : 273.0) Member of the R2R3 factor gene family.; myb domain protein 93 (MYB93); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 9 (TAIR:AT5G16770.2); Has 9075 Blast hits to 8286 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 899; Fungi - 498; Plants - 5847; Viruses - 6; Other Eukaryotes - 1825 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 202.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 195.0) no description available & (reliability: 546.0) & (original description: Putative Myb48, Description = P-type R2R3 Myb protein, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold39953_12875-16470' '(at3g12720 : 242.0) Member of the R2R3 factor gene family.; myb domain protein 67 (MYB67); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 50 (TAIR:AT1G57560.1); Has 8912 Blast hits to 8278 proteins in 476 species: Archae - 0; Bacteria - 2; Metazoa - 680; Fungi - 532; Plants - 5859; Viruses - 3; Other Eukaryotes - 1836 (source: NCBI BLink). & (p20027|myb3_horvu : 209.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 194.0) no description available & (reliability: 484.0) & (original description: Putative MYB64, Description = MYB transcription factor MYB64, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold40600_6679-9458' '(at4g37260 : 175.0) Member of the R2R3 factor gene family.; myb domain protein 73 (MYB73); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 70 (TAIR:AT2G23290.1); Has 8844 Blast hits to 7889 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 797; Fungi - 643; Plants - 5365; Viruses - 3; Other Eukaryotes - 2036 (source: NCBI BLink). & (gnl|cdd|35271 : 150.0) no description available & (p93417|gam1_orysa : 111.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 85.8) no description available & (reliability: 350.0) & (original description: Putative myb11, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold40784_7689-11797' '(at3g08500 : 220.0) Encodes a putative R2R3-type MYB transcription factor (MYB83).; myb domain protein 83 (MYB83); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 46 (TAIR:AT5G12870.1); Has 9098 Blast hits to 8506 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 787; Fungi - 464; Plants - 5991; Viruses - 4; Other Eukaryotes - 1852 (source: NCBI BLink). & (p20027|myb3_horvu : 187.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 170.0) no description available & (reliability: 440.0) & (original description: Putative myb18, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold42212_4316-8676' '(at1g66230 : 262.0) Encodes a putative transcription factor (MYB20).; myb domain protein 20 (MYB20); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 43 (TAIR:AT5G16600.1); Has 8410 Blast hits to 7811 proteins in 453 species: Archae - 0; Bacteria - 0; Metazoa - 663; Fungi - 296; Plants - 5767; Viruses - 4; Other Eukaryotes - 1680 (source: NCBI BLink). & (q50ex6|odo1_pethy : 249.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (gnl|cdd|35271 : 185.0) no description available & (reliability: 524.0) & (original description: Putative myb, Description = MYB15, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold47610_12750-16092' '(at5g41020 : 340.0) myb family transcription factor; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35274 : 161.0) no description available & (reliability: 680.0) & (original description: Putative BnaC04g33270D, Description = BnaC04g33270D protein, PFAM = PF13921)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold55471_1758-7300' '(at1g07540 : 356.0) Arabidopsis thaliana telomere-binding protein, putative (At1g07540); TRF-like 2 (TRFL2); FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 1 (TAIR:AT3G46590.2); Has 350 Blast hits to 338 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 4; Plants - 309; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 712.0) & (original description: Putative TRP5, Description = Telomere repeat-binding protein 5, PFAM = )' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold57105_3611-7117' '(at5g14340 : 218.0) Member of the R2R3 factor gene family.; myb domain protein 40 (MYB40); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 20 (TAIR:AT1G66230.1); Has 8800 Blast hits to 8097 proteins in 536 species: Archae - 0; Bacteria - 0; Metazoa - 861; Fungi - 444; Plants - 5790; Viruses - 6; Other Eukaryotes - 1699 (source: NCBI BLink). & (p80073|myb2_phypa : 202.0) Myb-related protein Pp2 - Physcomitrella patens (Moss) & (gnl|cdd|35271 : 177.0) no description available & (reliability: 436.0) & (original description: Putative MYB48, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold58229_7597-10685' '(at5g67300 : 229.0) Member of the R2R3 factor MYB gene family involved in mediating plant responses to a variety of abiotic stimiuli.; myb domain protein r1 (MYBR1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 77 (TAIR:AT3G50060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35271 : 164.0) no description available & (p93417|gam1_orysa : 110.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 88.9) no description available & (reliability: 458.0) & (original description: Putative MYB44, Description = Transcription factor MYB44, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold58750_1-3231' '(at1g09540 : 264.0) Encodes putative transcription factor. Mutants lack of mucilage extrusion from the seeds during imbibition. Reduced quantities of mucilage are deposited during the development of the seed coat epidermis in myb61 mutants. Expressed in guard cells,loss of function mutations show an increase in stomatal pore opening suggesting a role in ABA independent regulation of stomatal pore size.; myb domain protein 61 (MYB61); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 50 (TAIR:AT1G57560.1); Has 8976 Blast hits to 8269 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 766; Fungi - 514; Plants - 5880; Viruses - 4; Other Eukaryotes - 1812 (source: NCBI BLink). & (p20027|myb3_horvu : 213.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 182.0) no description available & (reliability: 528.0) & (original description: Putative MYB83, Description = MYB transcription factor 83, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold61643_5223-11331' '(at2g42660 : 94.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G38300.1); Has 1621 Blast hits to 1617 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1607; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative MYBR14, Description = Putative Myb family transcription factor, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold61679_8585-11441' '(at4g37260 : 221.0) Member of the R2R3 factor gene family.; myb domain protein 73 (MYB73); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 70 (TAIR:AT2G23290.1); Has 8844 Blast hits to 7889 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 797; Fungi - 643; Plants - 5365; Viruses - 3; Other Eukaryotes - 2036 (source: NCBI BLink). & (gnl|cdd|35271 : 165.0) no description available & (p93417|gam1_orysa : 113.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 91.2) no description available & (reliability: 442.0) & (original description: Putative B19, Description = Myb-like protein, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold64987_7256-10558' '(at4g21440 : 290.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p20025|myb38_maize : 211.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 197.0) no description available & (reliability: 580.0) & (original description: Putative myb1, Description = MYB1, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold73096_4005-7184' '(at4g37780 : 179.0) "encoded by the Myb-like transcription factor MYB87, regulates axillary meristem formation, expressed throughout the plant. Member of the R2R3 factor gene family."; myb domain protein 87 (MYB87); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb domain protein 68 (TAIR:AT5G65790.1); Has 8573 Blast hits to 8093 proteins in 467 species: Archae - 0; Bacteria - 0; Metazoa - 622; Fungi - 441; Plants - 5850; Viruses - 3; Other Eukaryotes - 1657 (source: NCBI BLink). & (gnl|cdd|35271 : 170.0) no description available & (p20025|myb38_maize : 157.0) Myb-related protein Zm38 - Zea mays (Maize) & (reliability: 358.0) & (original description: Putative myb, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold73103_5318-8607' '(gnl|cdd|35271 : 145.0) no description available & (at3g13890 : 143.0) Encodes a putative transcription factor (MYB26).; myb domain protein 26 (MYB26); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 103 (TAIR:AT1G63910.1); Has 8800 Blast hits to 8217 proteins in 478 species: Archae - 0; Bacteria - 0; Metazoa - 734; Fungi - 453; Plants - 5838; Viruses - 3; Other Eukaryotes - 1772 (source: NCBI BLink). & (p20027|myb3_horvu : 135.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (reliability: 286.0) & (original description: Putative myb18, Description = MYB transcription factor, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold75062_1-3337' '(at2g36890 : 221.0) "Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB38, regulates axillary meristem formation. "; REGULATOR OF AXILLARY MERISTEMS 2 (RAX2); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 37 (TAIR:AT5G23000.1); Has 8785 Blast hits to 8145 proteins in 459 species: Archae - 0; Bacteria - 0; Metazoa - 710; Fungi - 476; Plants - 5916; Viruses - 4; Other Eukaryotes - 1679 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 170.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 169.0) no description available & (reliability: 442.0) & (original description: Putative MYB89, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold76744_3704-7123' '(at1g09540 : 285.0) Encodes putative transcription factor. Mutants lack of mucilage extrusion from the seeds during imbibition. Reduced quantities of mucilage are deposited during the development of the seed coat epidermis in myb61 mutants. Expressed in guard cells,loss of function mutations show an increase in stomatal pore opening suggesting a role in ABA independent regulation of stomatal pore size.; myb domain protein 61 (MYB61); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 50 (TAIR:AT1G57560.1); Has 8976 Blast hits to 8269 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 766; Fungi - 514; Plants - 5880; Viruses - 4; Other Eukaryotes - 1812 (source: NCBI BLink). & (p20027|myb3_horvu : 213.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 182.0) no description available & (reliability: 570.0) & (original description: Putative MYB4, Description = R2R3-MYB protein, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold80355_605-5603' '(at1g17950 : 225.0) putative transcription factor: R2R3-MYB transcription family; myb domain protein 52 (MYB52); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 54 (TAIR:AT1G73410.1); Has 8890 Blast hits to 7951 proteins in 553 species: Archae - 0; Bacteria - 0; Metazoa - 901; Fungi - 603; Plants - 5404; Viruses - 5; Other Eukaryotes - 1977 (source: NCBI BLink). & (gnl|cdd|35271 : 144.0) no description available & (p20024|myb1_maize : 106.0) Myb-related protein Zm1 - Zea mays (Maize) & (gnl|cdd|34748 : 82.4) no description available & (reliability: 450.0) & (original description: Putative myb, Description = MYB transcription factor R2R3 type, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold80767_1668-6548' '(at1g66230 : 253.0) Encodes a putative transcription factor (MYB20).; myb domain protein 20 (MYB20); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 43 (TAIR:AT5G16600.1); Has 8410 Blast hits to 7811 proteins in 453 species: Archae - 0; Bacteria - 0; Metazoa - 663; Fungi - 296; Plants - 5767; Viruses - 4; Other Eukaryotes - 1680 (source: NCBI BLink). & (q50ex6|odo1_pethy : 241.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (gnl|cdd|35271 : 182.0) no description available & (reliability: 506.0) & (original description: Putative myb, Description = MYB15, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold82528_1949-6641' '(at5g49330 : 199.0) Member of the R2R3 factor gene family.; myb domain protein 111 (MYB111); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 12 (TAIR:AT2G47460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p27898|mybp_maize : 194.0) Myb-related protein P - Zea mays (Maize) & (gnl|cdd|35271 : 157.0) no description available & (reliability: 398.0) & (original description: Putative MYB12, Description = MYB12, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold83385_1-5079' '(at3g08500 : 221.0) Encodes a putative R2R3-type MYB transcription factor (MYB83).; myb domain protein 83 (MYB83); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 46 (TAIR:AT5G12870.1); Has 9098 Blast hits to 8506 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 787; Fungi - 464; Plants - 5991; Viruses - 4; Other Eukaryotes - 1852 (source: NCBI BLink). & (p20027|myb3_horvu : 180.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 165.0) no description available & (reliability: 442.0) & (original description: Putative myb18, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold86968_132-3494' '(p10290|mybc_maize : 197.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (at3g13540 : 196.0) Encodes a member of the MYB family of transcriptional regulators. MYB5 act as a negative regulator of trichome branching and play a role in the correct formation of the seed coat and possibly the formation the underlying endosperm layers. Loss of function mutations have defects in seed coat mucilage and columella cells as well as trichome defects (smaller and reduced number of branches).; myb domain protein 5 (MYB5); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 17 (TAIR:AT3G61250.1); Has 8972 Blast hits to 8275 proteins in 512 species: Archae - 0; Bacteria - 0; Metazoa - 834; Fungi - 461; Plants - 5987; Viruses - 3; Other Eukaryotes - 1687 (source: NCBI BLink). & (gnl|cdd|35271 : 182.0) no description available & (reliability: 392.0) & (original description: Putative MYB8, Description = Putative R2R3 MYB protein 8, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold106083_334-3342' '(at3g47600 : 301.0) Encodes a putative transcription factor (MYB94).; myb domain protein 94 (MYB94); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 96 (TAIR:AT5G62470.2); Has 8929 Blast hits to 8284 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 491; Plants - 5808; Viruses - 4; Other Eukaryotes - 1790 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 192.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 186.0) no description available & (gnl|cdd|34748 : 81.2) no description available & (reliability: 602.0) & (original description: Putative MYB306, Description = Myb-related protein 306, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.3scaffold113758_82-2621' '(at4g37260 : 172.0) Member of the R2R3 factor gene family.; myb domain protein 73 (MYB73); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 70 (TAIR:AT2G23290.1); Has 8844 Blast hits to 7889 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 797; Fungi - 643; Plants - 5365; Viruses - 3; Other Eukaryotes - 2036 (source: NCBI BLink). & (gnl|cdd|35271 : 150.0) no description available & (p93417|gam1_orysa : 105.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 87.4) no description available & (reliability: 344.0) & (original description: Putative MYB1, Description = Putative R2R3 MYB protein 1, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold39_1180153-1183515' '(at1g22640 : 197.0) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression; myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (p10290|mybc_maize : 196.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (gnl|cdd|35271 : 182.0) no description available & (reliability: 394.0) & (original description: Putative MYB6, Description = MYB6, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold614_2455-7271' '(at1g63910 : 238.0) member of MYB3R- and R2R3- type MYB- encoding genes; myb domain protein 103 (AtMYB103); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 26 (TAIR:AT3G13890.2); Has 8923 Blast hits to 8250 proteins in 474 species: Archae - 0; Bacteria - 0; Metazoa - 755; Fungi - 504; Plants - 5899; Viruses - 6; Other Eukaryotes - 1759 (source: NCBI BLink). & (gnl|cdd|35271 : 174.0) no description available & (p20027|myb3_horvu : 172.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (reliability: 476.0) & (original description: Putative MS35, Description = Transcription factor MYB86, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold724_241794-244895' '(at4g13480 : 231.0) Member of the R2R3 factor gene family.; myb domain protein 79 (MYB79); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 305 (TAIR:AT3G24310.1); Has 8943 Blast hits to 8160 proteins in 474 species: Archae - 0; Bacteria - 0; Metazoa - 824; Fungi - 482; Plants - 5824; Viruses - 6; Other Eukaryotes - 1807 (source: NCBI BLink). & (gnl|cdd|35271 : 171.0) no description available & (q4jl76|myba2_orysa : 168.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 462.0) & (original description: Putative myb, Description = Snapdragon myb protein 305 homolog, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold724_241812-244865' '(at3g24310 : 231.0) snapdragon myb protein 305 homolog (myb); myb domain protein 305 (MYB305); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 79 (TAIR:AT4G13480.1); Has 8987 Blast hits to 8204 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 778; Fungi - 510; Plants - 5849; Viruses - 4; Other Eukaryotes - 1846 (source: NCBI BLink). & (q4jl76|myba2_orysa : 169.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (gnl|cdd|35271 : 168.0) no description available & (reliability: 462.0) & (original description: Putative MYB, Description = R2R3-MYB factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold798_20722-24645' '(at5g52260 : 187.0) Member of the R2R3 factor gene family.; myb domain protein 19 (MYB19); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 18 (TAIR:AT4G25560.1); Has 8937 Blast hits to 8289 proteins in 544 species: Archae - 0; Bacteria - 0; Metazoa - 775; Fungi - 488; Plants - 5833; Viruses - 3; Other Eukaryotes - 1838 (source: NCBI BLink). & (gnl|cdd|35271 : 169.0) no description available & (p20027|myb3_horvu : 159.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (reliability: 374.0) & (original description: Putative scMYB6, Description = ScMYB6 protein, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold1349_413400-426592' '(at3g18100 : 467.0) Member of the R2R3 transcription factor gene family.; myb domain protein 4r1 (MYB4R1); CONTAINS InterPro DOMAIN/s: MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-3 (TAIR:AT3G09370.2). & (gnl|cdd|35272 : 162.0) no description available & (reliability: 934.0) & (original description: Putative MYB96, Description = MYB transcription factor MYB96, PFAM = PF00249;PF13921)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold1467_385663-389799' '(at3g13890 : 144.0) Encodes a putative transcription factor (MYB26).; myb domain protein 26 (MYB26); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 103 (TAIR:AT1G63910.1); Has 8800 Blast hits to 8217 proteins in 478 species: Archae - 0; Bacteria - 0; Metazoa - 734; Fungi - 453; Plants - 5838; Viruses - 3; Other Eukaryotes - 1772 (source: NCBI BLink). & (gnl|cdd|35271 : 139.0) no description available & (p20027|myb3_horvu : 135.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (reliability: 288.0) & (original description: Putative myb18, Description = MYB transcription factor, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold1816_92141-97739' '(at2g40260 : 104.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G38300.1); Has 1902 Blast hits to 1885 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 17; Plants - 1623; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (reliability: 199.6) & (original description: Putative PGSC0003DMG400029440, Description = Putative Myb family transcription factor, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold2336_296346-299246' '(at4g37260 : 171.0) Member of the R2R3 factor gene family.; myb domain protein 73 (MYB73); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 70 (TAIR:AT2G23290.1); Has 8844 Blast hits to 7889 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 797; Fungi - 643; Plants - 5365; Viruses - 3; Other Eukaryotes - 2036 (source: NCBI BLink). & (gnl|cdd|35271 : 150.0) no description available & (p93417|gam1_orysa : 104.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 89.3) no description available & (reliability: 342.0) & (original description: Putative myb11, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold2459_328743-332371' '(at3g30210 : 197.0) Encodes a putative transcription factor, member of the R2R3 factor gene family (MYB121).; myb domain protein 121 (MYB121); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 305 (TAIR:AT3G24310.1); Has 9169 Blast hits to 8390 proteins in 555 species: Archae - 0; Bacteria - 0; Metazoa - 942; Fungi - 521; Plants - 5868; Viruses - 6; Other Eukaryotes - 1832 (source: NCBI BLink). & (gnl|cdd|35271 : 167.0) no description available & (q4jl76|myba2_orysa : 152.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 394.0) & (original description: Putative MYB14, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold2550_197920-201777' '(at5g14340 : 200.0) Member of the R2R3 factor gene family.; myb domain protein 40 (MYB40); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 20 (TAIR:AT1G66230.1); Has 8800 Blast hits to 8097 proteins in 536 species: Archae - 0; Bacteria - 0; Metazoa - 861; Fungi - 444; Plants - 5790; Viruses - 6; Other Eukaryotes - 1699 (source: NCBI BLink). & (p80073|myb2_phypa : 187.0) Myb-related protein Pp2 - Physcomitrella patens (Moss) & (gnl|cdd|35271 : 157.0) no description available & (reliability: 400.0) & (original description: Putative MYB315, Description = Myb-related protein 315, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold2859_80292-89134' '(at1g09710 : 213.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G58220.1). & (reliability: 426.0) & (original description: Putative MTR_8g024690, Description = Myb-like DNA-binding domain protein, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold3631_211093-214115' '(at4g21440 : 289.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 208.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 199.0) no description available & (reliability: 578.0) & (original description: Putative myb1, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold4153_14887-18572' '(at4g18770 : 200.0) MYB98 is a member of the R2R3-MYB gene family, the members of which likely encode transcription factors. Within an ovule, MYB98 is expressed exclusively in the synergid cells, and mutations in this gene affect the female gametophyte specifically. myb98 female gametophytes are affected in two unique features of the synergid cell, pollen tube guidance and the filiform apparatus, but are otherwise normal. This suggests that MYB98 controls the development of specific features within the synergid cell during female gametophyte development. MYB98 also is expressed in trichomes and endosperm. Homozygous myb98 mutants exhibit no sporophytic defects, including trichome and endosperm defects.; myb domain protein 98 (MYB98); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 118 (TAIR:AT3G27785.1); Has 10125 Blast hits to 8427 proteins in 562 species: Archae - 0; Bacteria - 3; Metazoa - 1026; Fungi - 830; Plants - 5955; Viruses - 3; Other Eukaryotes - 2308 (source: NCBI BLink). & (gnl|cdd|35271 : 142.0) no description available & (p93417|gam1_orysa : 102.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 86.6) no description available & (reliability: 400.0) & (original description: Putative amyb, Description = Transcriptional activator Myb, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold4497_21094-63867' '(q7xbh4|myb4_orysa : 152.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 150.0) no description available & (at3g23250 : 149.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative lbm1, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold4585_42349-47049' '(at1g63910 : 246.0) member of MYB3R- and R2R3- type MYB- encoding genes; myb domain protein 103 (AtMYB103); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 26 (TAIR:AT3G13890.2); Has 8923 Blast hits to 8250 proteins in 474 species: Archae - 0; Bacteria - 0; Metazoa - 755; Fungi - 504; Plants - 5899; Viruses - 6; Other Eukaryotes - 1759 (source: NCBI BLink). & (p20027|myb3_horvu : 176.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 173.0) no description available & (reliability: 492.0) & (original description: Putative THM1, Description = Transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold4935_38566-42402' '(at1g26580 : 166.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: ELM2 domain-containing protein (TAIR:AT2G03470.1); Has 161 Blast hits to 161 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 4; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative UGD1, Description = AT-rich interactive domain-containing 2-like protein, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold5867_45376-54045' '(at5g02320 : 369.0) Encodes a putative c-MYB-like transcription factor of the MYB3R factor gene family (MYB3R5).; myb domain protein 3r-5 (MYB3R-5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-3 (TAIR:AT3G09370.1). & (gnl|cdd|35271 : 158.0) no description available & (p93417|gam1_orysa : 109.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 97.8) no description available & (reliability: 738.0) & (original description: Putative MYB65, Description = MYB transcription factor MYB65, PFAM = PF00249;PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold6376_181868-185549' '(p27898|mybp_maize : 133.0) Myb-related protein P - Zea mays (Maize) & (at2g47460 : 130.0) "MYB12 belongs to subgroup 7 of the R2R3-MYB family. It strongly activates the promoters of chalcone synthase (CHS), flavanone 3-hydroxylase (F3H), flavonol synthase (FLS) and - to a lesser extent - chalcone flavanone isomerase (CHI), but cannot activate the promoters of flavonoid-3'hydroxylase (F3'H) and dihydroflavonol 4-reductase (DF). The activation requires a functional MYB recognition element (MRE). Results from the myb12-1f allele indicate that an activation domain might be present in the C-terminus. Overexpression or knock-out plants do not show any obvious phenotype under greenhouse conditions. Young myb12-ko seedlings contain reduced amounts of flavonoids (quercetin and kaempferol), while seedlings as well as leaves of MYB12-OX plants displayed an increased flavonoid content. They did not show any significant difference in anthocyanin content. Expression of CHS and FLS shows a clear correlation to MYB12 expression levels. CHI and F3H show increased transcript levels in the MYB12-OX lines, but no differences in the knock-out. Even in the absence of functional MYB12, flavonol biosynthesis is not completely absent, suggesting functional redundancy. " The redundant factors are MYB11 and MYB111 although MYB12 is primarily required for flavonol biosynthesis in roots.; myb domain protein 12 (MYB12); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 11 (TAIR:AT3G62610.1); Has 8833 Blast hits to 8133 proteins in 470 species: Archae - 0; Bacteria - 0; Metazoa - 786; Fungi - 423; Plants - 5965; Viruses - 6; Other Eukaryotes - 1653 (source: NCBI BLink). & (gnl|cdd|35271 : 129.0) no description available & (reliability: 260.0) & (original description: Putative myb, Description = MYB family protein, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold6538_75642-79834' '(at2g13600 : 387.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 46660 Blast hits to 13875 proteins in 226 species: Archae - 0; Bacteria - 4; Metazoa - 74; Fungi - 58; Plants - 45878; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (q76c99|rf1_orysa : 115.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 722.0) & (original description: Putative , Description = Pentatricopeptide repeat-containing protein, putative, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold6948_72412-76503' '(at1g69580 : 168.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04030.3); Has 1687 Blast hits to 1671 proteins in 68 species: Archae - 0; Bacteria - 6; Metazoa - 4; Fungi - 0; Plants - 1652; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative MYB36, Description = MYB-related protein, PFAM = PF14379)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold7151_9397-53855' '(at4g18770 : 228.0) MYB98 is a member of the R2R3-MYB gene family, the members of which likely encode transcription factors. Within an ovule, MYB98 is expressed exclusively in the synergid cells, and mutations in this gene affect the female gametophyte specifically. myb98 female gametophytes are affected in two unique features of the synergid cell, pollen tube guidance and the filiform apparatus, but are otherwise normal. This suggests that MYB98 controls the development of specific features within the synergid cell during female gametophyte development. MYB98 also is expressed in trichomes and endosperm. Homozygous myb98 mutants exhibit no sporophytic defects, including trichome and endosperm defects.; myb domain protein 98 (MYB98); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 118 (TAIR:AT3G27785.1); Has 10125 Blast hits to 8427 proteins in 562 species: Archae - 0; Bacteria - 3; Metazoa - 1026; Fungi - 830; Plants - 5955; Viruses - 3; Other Eukaryotes - 2308 (source: NCBI BLink). & (gnl|cdd|35271 : 140.0) no description available & (p93417|gam1_orysa : 105.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 86.2) no description available & (reliability: 456.0) & (original description: Putative MYB18, Description = R2R3-MYB protein, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'nbv0.5scaffold7974_1-3050' '(at2g36890 : 226.0) "Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB38, regulates axillary meristem formation. "; REGULATOR OF AXILLARY MERISTEMS 2 (RAX2); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 37 (TAIR:AT5G23000.1); Has 8785 Blast hits to 8145 proteins in 459 species: Archae - 0; Bacteria - 0; Metazoa - 710; Fungi - 476; Plants - 5916; Viruses - 4; Other Eukaryotes - 1679 (source: NCBI BLink). & (gnl|cdd|35271 : 176.0) no description available & (q7xbh4|myb4_orysa : 167.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 452.0) & (original description: Putative myb, Description = MYB7, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00003846ctg001_1291-6289' '(at1g17950 : 227.0) putative transcription factor: R2R3-MYB transcription family; myb domain protein 52 (MYB52); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 54 (TAIR:AT1G73410.1); Has 8890 Blast hits to 7951 proteins in 553 species: Archae - 0; Bacteria - 0; Metazoa - 901; Fungi - 603; Plants - 5404; Viruses - 5; Other Eukaryotes - 1977 (source: NCBI BLink). & (gnl|cdd|35271 : 144.0) no description available & (p20024|myb1_maize : 103.0) Myb-related protein Zm1 - Zea mays (Maize) & (gnl|cdd|34748 : 82.4) no description available & (reliability: 454.0) & (original description: Putative MYB3, Description = MYB transcription factor 3, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00004095ctg001_95-4813' '(p93417|gam1_orysa : 246.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (at3g11440 : 215.0) Member of the R2R3-MYB gene family. Similar to GA-induced Barley myb gene. May be induced during germination in response to GA. Double mutants with MYB33 are male sterile, showing defects in pollen development and anther development. Contains a binding site for miRNA159 and may be spatially regulated by this micro RNA. The male sterile phenotype of the MYB33/MYB65 double mutant is light and temperature sensitive. Fertility can be restored with increased light intensity and lower temperatures.; myb domain protein 65 (MYB65); CONTAINS InterPro DOMAIN/s: Transcription factor, GAMYB (InterPro:IPR016310), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 33 (TAIR:AT5G06100.3); Has 8961 Blast hits to 8327 proteins in 478 species: Archae - 0; Bacteria - 0; Metazoa - 727; Fungi - 480; Plants - 5988; Viruses - 3; Other Eukaryotes - 1763 (source: NCBI BLink). & (gnl|cdd|35271 : 167.0) no description available & (reliability: 430.0) & (original description: Putative myb, Description = MYB16, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00005034ctg026_2730-10675' '(at1g09710 : 214.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G58220.1). & (reliability: 428.0) & (original description: Putative RCOM_1039610, Description = DNA binding protein, putative, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00005264ctg003_145-4344' '(at5g16600 : 271.0) Encodes a putative transcription factor (MYB43).; myb domain protein 43 (MYB43); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 20 (TAIR:AT1G66230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q50ex6|odo1_pethy : 250.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (gnl|cdd|35271 : 190.0) no description available & (reliability: 542.0) & (original description: Putative myb, Description = MYB15, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00005571ctg000_1706-5703' '(at3g28470 : 228.0) Member of the R2R3 factor gene family.; DEFECTIVE IN MERISTEM DEVELOPMENT AND FUNCTION 1 (TDF1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 103 (TAIR:AT5G56110.1); Has 8909 Blast hits to 8197 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 781; Fungi - 493; Plants - 5873; Viruses - 5; Other Eukaryotes - 1757 (source: NCBI BLink). & (p20025|myb38_maize : 194.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 192.0) no description available & (reliability: 456.0) & (original description: Putative MYB35, Description = Transcription factor MYB35, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00006930ctg001_1502-4959' '(at3g24310 : 199.0) snapdragon myb protein 305 homolog (myb); myb domain protein 305 (MYB305); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 79 (TAIR:AT4G13480.1); Has 8987 Blast hits to 8204 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 778; Fungi - 510; Plants - 5849; Viruses - 4; Other Eukaryotes - 1846 (source: NCBI BLink). & (gnl|cdd|35271 : 173.0) no description available & (q4jl76|myba2_orysa : 158.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 398.0) & (original description: Putative myb, Description = Snapdragon myb protein 305 homolog, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00008494ctg001_2704-7466' '(at1g25360 : 1004.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 48992 Blast hits to 14461 proteins in 282 species: Archae - 2; Bacteria - 7; Metazoa - 148; Fungi - 100; Plants - 48130; Viruses - 0; Other Eukaryotes - 605 (source: NCBI BLink). & (q76c99|rf1_orysa : 95.1) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2008.0) & (original description: Putative PCMP-H74, Description = Pentatricopeptide repeat-containing protein At1g25360, PFAM = PF14432;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00008629ctg010_7473-10572' '(at4g18770 : 228.0) MYB98 is a member of the R2R3-MYB gene family, the members of which likely encode transcription factors. Within an ovule, MYB98 is expressed exclusively in the synergid cells, and mutations in this gene affect the female gametophyte specifically. myb98 female gametophytes are affected in two unique features of the synergid cell, pollen tube guidance and the filiform apparatus, but are otherwise normal. This suggests that MYB98 controls the development of specific features within the synergid cell during female gametophyte development. MYB98 also is expressed in trichomes and endosperm. Homozygous myb98 mutants exhibit no sporophytic defects, including trichome and endosperm defects.; myb domain protein 98 (MYB98); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 118 (TAIR:AT3G27785.1); Has 10125 Blast hits to 8427 proteins in 562 species: Archae - 0; Bacteria - 3; Metazoa - 1026; Fungi - 830; Plants - 5955; Viruses - 3; Other Eukaryotes - 2308 (source: NCBI BLink). & (gnl|cdd|35271 : 140.0) no description available & (p93417|gam1_orysa : 102.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 85.8) no description available & (reliability: 456.0) & (original description: Putative MYB18, Description = R2R3-MYB protein, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00013740ctg008_11466-14030' '(at5g53200 : 98.2) TRIPTYCHON (TRY); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G30420.1); Has 2274 Blast hits to 2274 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 2256; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative TCL2, Description = MYB-like transcription factor TCL2, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00013875ctg011_2705-8304' '(at2g40260 : 103.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G38300.1); Has 1902 Blast hits to 1885 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 17; Plants - 1623; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative BnaCnng71310D, Description = BnaCnng71310D protein, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00014152ctg014_1-2964' '(at5g57620 : 228.0) Encodes a putative transcription factor (MYB36).; myb domain protein 36 (MYB36); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 68 (TAIR:AT5G65790.1); Has 9119 Blast hits to 8411 proteins in 472 species: Archae - 0; Bacteria - 0; Metazoa - 823; Fungi - 478; Plants - 5914; Viruses - 3; Other Eukaryotes - 1901 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 173.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 168.0) no description available & (reliability: 456.0) & (original description: Putative BLIND, Description = BLIND, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00015624ctg006_1586-4630' '(at4g21440 : 272.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 207.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 201.0) no description available & (reliability: 544.0) & (original description: Putative myb1, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00017353ctg027_5173-8133' '(at4g37260 : 172.0) Member of the R2R3 factor gene family.; myb domain protein 73 (MYB73); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 70 (TAIR:AT2G23290.1); Has 8844 Blast hits to 7889 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 797; Fungi - 643; Plants - 5365; Viruses - 3; Other Eukaryotes - 2036 (source: NCBI BLink). & (gnl|cdd|35271 : 149.0) no description available & (p93417|gam1_orysa : 108.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 83.5) no description available & (reliability: 344.0) & (original description: Putative myb11, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00020975ctg001_1-3751' '(at3g13540 : 204.0) Encodes a member of the MYB family of transcriptional regulators. MYB5 act as a negative regulator of trichome branching and play a role in the correct formation of the seed coat and possibly the formation the underlying endosperm layers. Loss of function mutations have defects in seed coat mucilage and columella cells as well as trichome defects (smaller and reduced number of branches).; myb domain protein 5 (MYB5); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 17 (TAIR:AT3G61250.1); Has 8972 Blast hits to 8275 proteins in 512 species: Archae - 0; Bacteria - 0; Metazoa - 834; Fungi - 461; Plants - 5987; Viruses - 3; Other Eukaryotes - 1687 (source: NCBI BLink). & (p10290|mybc_maize : 196.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (gnl|cdd|35271 : 184.0) no description available & (reliability: 408.0) & (original description: Putative myb, Description = Transcription factor MYB 12, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00022028ctg000_1-4593' '(at3g61250 : 341.0) Member of the R2R3 factor gene family.; myb domain protein 17 (MYB17); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 16 (TAIR:AT5G15310.1); Has 8810 Blast hits to 8210 proteins in 476 species: Archae - 0; Bacteria - 0; Metazoa - 695; Fungi - 480; Plants - 5869; Viruses - 3; Other Eukaryotes - 1763 (source: NCBI BLink). & (q50ex6|odo1_pethy : 205.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (gnl|cdd|35271 : 187.0) no description available & (reliability: 682.0) & (original description: Putative myb9, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00022522ctg009_51-2951' '(at4g37260 : 175.0) Member of the R2R3 factor gene family.; myb domain protein 73 (MYB73); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 70 (TAIR:AT2G23290.1); Has 8844 Blast hits to 7889 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 797; Fungi - 643; Plants - 5365; Viruses - 3; Other Eukaryotes - 2036 (source: NCBI BLink). & (gnl|cdd|35271 : 155.0) no description available & (p93417|gam1_orysa : 107.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 89.3) no description available & (reliability: 350.0) & (original description: Putative myb11, Description = R2r3-myb transcription factor, putative, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00023412ctg006_24839-29074' '(at3g08500 : 218.0) Encodes a putative R2R3-type MYB transcription factor (MYB83).; myb domain protein 83 (MYB83); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 46 (TAIR:AT5G12870.1); Has 9098 Blast hits to 8506 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 787; Fungi - 464; Plants - 5991; Viruses - 4; Other Eukaryotes - 1852 (source: NCBI BLink). & (p20027|myb3_horvu : 188.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 170.0) no description available & (reliability: 436.0) & (original description: Putative myb18, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00024853ctg014_9193-11334' '(q7xbh4|myb4_orysa : 153.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 153.0) no description available & (at4g21440 : 152.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative lbm1, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00026094ctg008_2382-6799' '(at5g29000 : 161.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative BnaC08g13160D, Description = BnaC08g13160D protein, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00027320ctg001_10581-13319' '(at5g49620 : 236.0) Member of the R2R3 factor gene family.; myb domain protein 78 (MYB78); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 108 (TAIR:AT3G06490.1). & (gnl|cdd|35271 : 166.0) no description available & (q4jl76|myba2_orysa : 137.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 472.0) & (original description: Putative MYB108, Description = Transcription factor MYB108, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00035824ctg002_290-3832' '(at1g68320 : 220.0) putative transcription factor: R2R3-MYB transcription family. Involved in regulation of phosphate starvation responses and gibberellic acid biosynthesis.; myb domain protein 62 (MYB62); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 116 (TAIR:AT1G25340.1); Has 8752 Blast hits to 8056 proteins in 466 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 492; Plants - 5746; Viruses - 3; Other Eukaryotes - 1772 (source: NCBI BLink). & (gnl|cdd|35271 : 175.0) no description available & (p27898|mybp_maize : 155.0) Myb-related protein P - Zea mays (Maize) & (reliability: 440.0) & (original description: Putative MYB16, Description = R2R3-MYB protein, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00038665ctg001_12327-16690' '(at5g49330 : 216.0) Member of the R2R3 factor gene family.; myb domain protein 111 (MYB111); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 12 (TAIR:AT2G47460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p27898|mybp_maize : 212.0) Myb-related protein P - Zea mays (Maize) & (gnl|cdd|35271 : 172.0) no description available & (reliability: 432.0) & (original description: Putative MYB12, Description = MYB12, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00038812ctg010_10433-22051' '(at4g32730 : 629.0) Encodes a putative c-myb-like transcription factor with three MYB repeats.; PC-MYB1; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-4 (TAIR:AT5G11510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35271 : 163.0) no description available & (p93417|gam1_orysa : 109.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 97.0) no description available & (reliability: 1258.0) & (original description: Putative cmyb, Description = Transcriptional activator Myb, PFAM = PF00249;PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00038953ctg004_10666-13379' '(at5g67300 : 223.0) Member of the R2R3 factor MYB gene family involved in mediating plant responses to a variety of abiotic stimiuli.; myb domain protein r1 (MYBR1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 77 (TAIR:AT3G50060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35271 : 165.0) no description available & (p93417|gam1_orysa : 110.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 89.3) no description available & (reliability: 446.0) & (original description: Putative MYB44, Description = Transcription factor MYB44, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00045529ctg003_882-4169' '(at5g65790 : 228.0) Encodes a putative MYB transcription factor.; myb domain protein 68 (MYB68); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 84 (TAIR:AT3G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35271 : 177.0) no description available & (q7xbh4|myb4_orysa : 170.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 456.0) & (original description: Putative myb, Description = MYB7, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00046172ctg000_1-3270' '(at4g21440 : 290.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p20025|myb38_maize : 211.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 197.0) no description available & (reliability: 580.0) & (original description: Putative myb1, Description = MYB1, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00052854ctg001_1-3888' '(at1g07540 : 152.0) Arabidopsis thaliana telomere-binding protein, putative (At1g07540); TRF-like 2 (TRFL2); FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 1 (TAIR:AT3G46590.2); Has 350 Blast hits to 338 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 4; Plants - 309; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative TBP1, Description = Putative telomere repeat-binding protein 5-like, PFAM = )' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00055631ctg000_1-3294' '(at5g62470 : 272.0) Encodes a R2R3 type Myb transcription factor whose expression is strongly induced by abscisic acid. Mediates abscisic acid signaling during drought stress response.; myb domain protein 96 (MYB96); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 94 (TAIR:AT3G47600.1); Has 9691 Blast hits to 8398 proteins in 583 species: Archae - 0; Bacteria - 56; Metazoa - 899; Fungi - 554; Plants - 5844; Viruses - 4; Other Eukaryotes - 2334 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 185.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 176.0) no description available & (reliability: 544.0) & (original description: Putative MYB306, Description = Myb-related protein 306, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00058143ctg003_1-3319' '(at3g28470 : 146.0) Member of the R2R3 factor gene family.; DEFECTIVE IN MERISTEM DEVELOPMENT AND FUNCTION 1 (TDF1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 103 (TAIR:AT5G56110.1); Has 8909 Blast hits to 8197 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 781; Fungi - 493; Plants - 5873; Viruses - 5; Other Eukaryotes - 1757 (source: NCBI BLink). & (gnl|cdd|35271 : 135.0) no description available & (p20025|myb38_maize : 123.0) Myb-related protein Zm38 - Zea mays (Maize) & (reliability: 292.0) & (original description: Putative mixta, Description = MYB-related transcription factor, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben044scf00060696ctg000_4725-8816' '(at1g69580 : 168.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04030.3); Has 1687 Blast hits to 1671 proteins in 68 species: Archae - 0; Bacteria - 6; Metazoa - 4; Fungi - 0; Plants - 1652; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative myb6, Description = Myb family transcription factor APL, PFAM = PF14379)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101ctg07138_1-757' '(at1g09710 : 105.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G58220.1). & (reliability: 210.0) & (original description: Putative At1g09710, Description = DNA binding protein, PFAM = )' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00024_284611-288641' '(at3g28470 : 145.0) Member of the R2R3 factor gene family.; DEFECTIVE IN MERISTEM DEVELOPMENT AND FUNCTION 1 (TDF1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 103 (TAIR:AT5G56110.1); Has 8909 Blast hits to 8197 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 781; Fungi - 493; Plants - 5873; Viruses - 5; Other Eukaryotes - 1757 (source: NCBI BLink). & (gnl|cdd|35271 : 133.0) no description available & (p20025|myb38_maize : 123.0) Myb-related protein Zm38 - Zea mays (Maize) & (reliability: 290.0) & (original description: Putative mixta, Description = MYB-related transcription factor, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00046_921011-924460' '(at5g14340 : 239.0) Member of the R2R3 factor gene family.; myb domain protein 40 (MYB40); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 20 (TAIR:AT1G66230.1); Has 8800 Blast hits to 8097 proteins in 536 species: Archae - 0; Bacteria - 0; Metazoa - 861; Fungi - 444; Plants - 5790; Viruses - 6; Other Eukaryotes - 1699 (source: NCBI BLink). & (q50ex6|odo1_pethy : 215.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (gnl|cdd|35271 : 174.0) no description available & (reliability: 478.0) & (original description: Putative MYB315, Description = Myb-related protein 315, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00052_650802-655420' '(at1g34670 : 275.0) Member of the R2R3 factor gene family.; myb domain protein 93 (MYB93); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 9 (TAIR:AT5G16770.2); Has 9075 Blast hits to 8286 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 899; Fungi - 498; Plants - 5847; Viruses - 6; Other Eukaryotes - 1825 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 202.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 194.0) no description available & (reliability: 550.0) & (original description: Putative Myb48, Description = P-type R2R3 Myb protein, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00054_45198-48609' '(at1g08810 : 275.0) putative transcription factor of the R2R3-MYB gene family. Transcript increases under conditions that promote stomatal opening (white and blue light, abi1-1 mutation) and decreases under conditions that trigger stomatal closure (ABA, desiccation, darkness), with the exception of elevated CO2. Expressed exclusively in guard cells of all tissues. It is required for light-induced opening of stomata. Mutant shows reduced stomatal aperture which helps to limit water loss during drought.; myb domain protein 60 (MYB60); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 96 (TAIR:AT5G62470.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 186.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 175.0) no description available & (reliability: 550.0) & (original description: Putative MYB306, Description = Myb-related protein 306, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00066_269483-275053' '(at1g07540 : 244.0) Arabidopsis thaliana telomere-binding protein, putative (At1g07540); TRF-like 2 (TRFL2); FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 1 (TAIR:AT3G46590.2); Has 350 Blast hits to 338 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 4; Plants - 309; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 488.0) & (original description: Putative myb, Description = Telomere repeat-binding protein 5, PFAM = )' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00223_290889-294193' '(q4jl76|myba2_orysa : 213.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (at3g46130 : 212.0) Encodes a putative transcription factor (MYB48) that functions to regulate flavonol biosynthesis primarily in cotyledons.; myb domain protein 48 (MYB48); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), MYB-like (InterPro:IPR017877), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb domain protein 59 (TAIR:AT5G59780.2). & (gnl|cdd|35271 : 157.0) no description available & (reliability: 424.0) & (original description: Putative MYB48, Description = Transcription factor MYB48, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00292_192499-195494' '(at2g23290 : 215.0) Member of the R2R3 factor gene family.; myb domain protein 70 (MYB70); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 73 (TAIR:AT4G37260.1); Has 8736 Blast hits to 7850 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 756; Fungi - 600; Plants - 5377; Viruses - 3; Other Eukaryotes - 2000 (source: NCBI BLink). & (gnl|cdd|35271 : 167.0) no description available & (p93417|gam1_orysa : 114.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 90.8) no description available & (reliability: 430.0) & (original description: Putative MYB44, Description = Transcription factor MYB44, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00315_45168-49490' '(at3g60460 : 223.0) Encodes an R2R3 myb transcription factor that is required for male gamete formation, specifically for entry of the generative cell into mitosis. Specifically expressed in the male germline.; DUO POLLEN 1 (DUO1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 97 (TAIR:AT4G26930.1); Has 8477 Blast hits to 7784 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 778; Fungi - 457; Plants - 5496; Viruses - 3; Other Eukaryotes - 1743 (source: NCBI BLink). & (gnl|cdd|35271 : 147.0) no description available & (p93417|gam1_orysa : 129.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (reliability: 446.0) & (original description: Putative B25, Description = Putative uncharacterized protein B25, PFAM = PF13921;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00339_326073-330528' '(at3g28470 : 232.0) Member of the R2R3 factor gene family.; DEFECTIVE IN MERISTEM DEVELOPMENT AND FUNCTION 1 (TDF1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 103 (TAIR:AT5G56110.1); Has 8909 Blast hits to 8197 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 781; Fungi - 493; Plants - 5873; Viruses - 5; Other Eukaryotes - 1757 (source: NCBI BLink). & (p20025|myb38_maize : 192.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 191.0) no description available & (reliability: 464.0) & (original description: Putative MYB35, Description = Transcription factor MYB35, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00388_895303-898669' '(at3g49690 : 218.0) "Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB84, regulates axillary meristem formation. "; myb domain protein 84 (MYB84); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 68 (TAIR:AT5G65790.1); Has 8670 Blast hits to 8092 proteins in 466 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 404; Plants - 5917; Viruses - 3; Other Eukaryotes - 1656 (source: NCBI BLink). & (gnl|cdd|35271 : 172.0) no description available & (q7xbh4|myb4_orysa : 163.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 436.0) & (original description: Putative MYB1, Description = R2R3-MYB transcription factor MYB1.2, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00389_59287-64972' '(at3g12560 : 346.0) Encodes a telomeric DNA-binding protein.; TRF-like 9 (TRFL9); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: telomeric DNA binding protein 1 (TAIR:AT5G13820.1); Has 334 Blast hits to 327 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 6; Plants - 306; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 692.0) & (original description: Putative TRP4, Description = Telomere repeat-binding protein 4, PFAM = )' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00448_140605-144049' '(at2g31180 : 168.0) Member of the R2R3 factor gene family.; myb domain protein 14 (MYB14); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 8955 Blast hits to 8193 proteins in 476 species: Archae - 0; Bacteria - 0; Metazoa - 819; Fungi - 463; Plants - 5874; Viruses - 6; Other Eukaryotes - 1793 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 167.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 157.0) no description available & (reliability: 336.0) & (original description: Putative MYB66, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00501_70200-74245' '(at3g23250 : 255.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 236.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 191.0) no description available & (reliability: 510.0) & (original description: Putative lbm1, Description = Myb-related transcription factor LBM1, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00551_393158-396901' '(at2g36890 : 209.0) "Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB38, regulates axillary meristem formation. "; REGULATOR OF AXILLARY MERISTEMS 2 (RAX2); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 37 (TAIR:AT5G23000.1); Has 8785 Blast hits to 8145 proteins in 459 species: Archae - 0; Bacteria - 0; Metazoa - 710; Fungi - 476; Plants - 5916; Viruses - 4; Other Eukaryotes - 1679 (source: NCBI BLink). & (gnl|cdd|35271 : 168.0) no description available & (q7xbh4|myb4_orysa : 160.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 418.0) & (original description: Putative MYB89, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00629_330586-344978' '(at3g08500 : 221.0) Encodes a putative R2R3-type MYB transcription factor (MYB83).; myb domain protein 83 (MYB83); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 46 (TAIR:AT5G12870.1); Has 9098 Blast hits to 8506 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 787; Fungi - 464; Plants - 5991; Viruses - 4; Other Eukaryotes - 1852 (source: NCBI BLink). & (p20027|myb3_horvu : 175.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 167.0) no description available & (reliability: 442.0) & (original description: Putative MYB46, Description = Transcription factor MYB46, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00783_426301-430004' '(at5g10280 : 268.0) Encodes a putative transcription factor (MYB92).; myb domain protein 92 (MYB92); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 53 (TAIR:AT5G65230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p20025|myb38_maize : 196.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 196.0) no description available & (reliability: 536.0) & (original description: Putative MYB92, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00797_108675-112037' '(at1g22640 : 197.0) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression; myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (p10290|mybc_maize : 197.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (gnl|cdd|35271 : 186.0) no description available & (reliability: 394.0) & (original description: Putative MYB6, Description = MYB6, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00859_401438-405898' '(at2g32460 : 211.0) Member of the R2R3 factor gene family.; myb domain protein 101 (MYB101); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 33 (TAIR:AT5G06100.3); Has 8826 Blast hits to 8366 proteins in 480 species: Archae - 0; Bacteria - 10; Metazoa - 663; Fungi - 452; Plants - 5861; Viruses - 5; Other Eukaryotes - 1835 (source: NCBI BLink). & (p93417|gam1_orysa : 204.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|35271 : 177.0) no description available & (reliability: 422.0) & (original description: Putative myb1, Description = MYB1, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00862_90238-94706' '(p93417|gam1_orysa : 256.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (at2g26960 : 230.0) Member of the R2R3 factor gene family.; myb domain protein 81 (MYB81); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 104 (TAIR:AT2G26950.1); Has 8679 Blast hits to 8043 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 712; Fungi - 479; Plants - 5750; Viruses - 3; Other Eukaryotes - 1735 (source: NCBI BLink). & (gnl|cdd|35271 : 173.0) no description available & (reliability: 460.0) & (original description: Putative myb, Description = MYB16, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00887_274362-279445' '(at1g18330 : 129.0) EARLY-PHYTOCHROME-RESPONSIVE1; EARLY-PHYTOCHROME-RESPONSIVE1 (EPR1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G10113.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative MYBR, Description = Transcription factor MYBR, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00956_391082-394911' '(at5g57620 : 225.0) Encodes a putative transcription factor (MYB36).; myb domain protein 36 (MYB36); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 68 (TAIR:AT5G65790.1); Has 9119 Blast hits to 8411 proteins in 472 species: Archae - 0; Bacteria - 0; Metazoa - 823; Fungi - 478; Plants - 5914; Viruses - 3; Other Eukaryotes - 1901 (source: NCBI BLink). & (gnl|cdd|35271 : 177.0) no description available & (q7xbh4|myb4_orysa : 167.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 450.0) & (original description: Putative MYB83, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf00961_403478-418701' '(at5g11510 : 305.0) Arabidopsis thaliana putative c-myb-like transcription factor MYB3R-4. Functions in powdery mildew induced host endoreduplication at the site of infection.; myb domain protein 3r-4 (MYB3R-4); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like protein (TAIR:AT4G32730.1); Has 13831 Blast hits to 8419 proteins in 581 species: Archae - 0; Bacteria - 44; Metazoa - 1293; Fungi - 976; Plants - 8377; Viruses - 6; Other Eukaryotes - 3135 (source: NCBI BLink). & (gnl|cdd|35271 : 150.0) no description available & (q7xbh4|myb4_orysa : 103.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|34748 : 87.8) no description available & (reliability: 610.0) & (original description: Putative cmyb, Description = Transcriptional activator Myb, PFAM = PF13921;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01013_184747-188840' '(at3g23250 : 229.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 224.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 187.0) no description available & (reliability: 458.0) & (original description: Putative lbm1, Description = Myb-related transcription factor LBM1, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01026_462764-466359' '(at3g12720 : 243.0) Member of the R2R3 factor gene family.; myb domain protein 67 (MYB67); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 50 (TAIR:AT1G57560.1); Has 8912 Blast hits to 8278 proteins in 476 species: Archae - 0; Bacteria - 2; Metazoa - 680; Fungi - 532; Plants - 5859; Viruses - 3; Other Eukaryotes - 1836 (source: NCBI BLink). & (p20027|myb3_horvu : 208.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 192.0) no description available & (reliability: 486.0) & (original description: Putative MYB64, Description = MYB transcription factor MYB64, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01076_449638-452583' '(at5g53200 : 97.4) TRIPTYCHON (TRY); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G30420.1); Has 2274 Blast hits to 2274 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 2256; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative CPC, Description = Transcription factor CPC, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01102_133095-136834' '(at2g21090 : 326.0) Pentatricopeptide repeat (PPR-like) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 41491 Blast hits to 14018 proteins in 251 species: Archae - 0; Bacteria - 11; Metazoa - 98; Fungi - 122; Plants - 40599; Viruses - 0; Other Eukaryotes - 661 (source: NCBI BLink). & (q76c99|rf1_orysa : 91.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 616.0) & (original description: Putative , Description = , PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01110_14398-18207' '(at1g75250 : 90.1) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative fsm1, Description = Homeodomain-like protein, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01184_1139331-1143703' '(at1g17950 : 239.0) putative transcription factor: R2R3-MYB transcription family; myb domain protein 52 (MYB52); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 54 (TAIR:AT1G73410.1); Has 8890 Blast hits to 7951 proteins in 553 species: Archae - 0; Bacteria - 0; Metazoa - 901; Fungi - 603; Plants - 5404; Viruses - 5; Other Eukaryotes - 1977 (source: NCBI BLink). & (gnl|cdd|35271 : 154.0) no description available & (p20024|myb1_maize : 111.0) Myb-related protein Zm1 - Zea mays (Maize) & (gnl|cdd|34748 : 85.4) no description available & (reliability: 478.0) & (original description: Putative myb, Description = MYB transcription factor R2R3 type, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01200_780155-783055' '(at4g37260 : 171.0) Member of the R2R3 factor gene family.; myb domain protein 73 (MYB73); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 70 (TAIR:AT2G23290.1); Has 8844 Blast hits to 7889 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 797; Fungi - 643; Plants - 5365; Viruses - 3; Other Eukaryotes - 2036 (source: NCBI BLink). & (gnl|cdd|35271 : 150.0) no description available & (p93417|gam1_orysa : 103.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 89.7) no description available & (reliability: 342.0) & (original description: Putative myb11, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01302_73316-77500' '(at5g16600 : 268.0) Encodes a putative transcription factor (MYB43).; myb domain protein 43 (MYB43); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 20 (TAIR:AT1G66230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q50ex6|odo1_pethy : 247.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (gnl|cdd|35271 : 191.0) no description available & (reliability: 536.0) & (original description: Putative myb, Description = MYB15, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01346_80466-84296' '(at1g26580 : 191.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: ELM2 domain-containing protein (TAIR:AT2G03470.1); Has 161 Blast hits to 161 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 4; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative MTR_3g023780, Description = ATP-binding protein, putative, PFAM = )' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01383_699625-707363' '(p93417|gam1_orysa : 259.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (at3g11440 : 223.0) Member of the R2R3-MYB gene family. Similar to GA-induced Barley myb gene. May be induced during germination in response to GA. Double mutants with MYB33 are male sterile, showing defects in pollen development and anther development. Contains a binding site for miRNA159 and may be spatially regulated by this micro RNA. The male sterile phenotype of the MYB33/MYB65 double mutant is light and temperature sensitive. Fertility can be restored with increased light intensity and lower temperatures.; myb domain protein 65 (MYB65); CONTAINS InterPro DOMAIN/s: Transcription factor, GAMYB (InterPro:IPR016310), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 33 (TAIR:AT5G06100.3); Has 8961 Blast hits to 8327 proteins in 478 species: Archae - 0; Bacteria - 0; Metazoa - 727; Fungi - 480; Plants - 5988; Viruses - 3; Other Eukaryotes - 1763 (source: NCBI BLink). & (gnl|cdd|35271 : 174.0) no description available & (reliability: 446.0) & (original description: Putative myb, Description = MYB16, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01394_360621-364664' '(at3g13540 : 252.0) Encodes a member of the MYB family of transcriptional regulators. MYB5 act as a negative regulator of trichome branching and play a role in the correct formation of the seed coat and possibly the formation the underlying endosperm layers. Loss of function mutations have defects in seed coat mucilage and columella cells as well as trichome defects (smaller and reduced number of branches).; myb domain protein 5 (MYB5); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 17 (TAIR:AT3G61250.1); Has 8972 Blast hits to 8275 proteins in 512 species: Archae - 0; Bacteria - 0; Metazoa - 834; Fungi - 461; Plants - 5987; Viruses - 3; Other Eukaryotes - 1687 (source: NCBI BLink). & (p20025|myb38_maize : 202.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 182.0) no description available & (reliability: 504.0) & (original description: Putative MYB5, Description = Transcription repressor MYB5, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01406_290197-296239' '(at3g09230 : 275.0) member of MYB3R- and R2R3- type MYB- encoding genes; myb domain protein 1 (MYB1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 109 (TAIR:AT3G55730.1); Has 8868 Blast hits to 7976 proteins in 477 species: Archae - 0; Bacteria - 0; Metazoa - 777; Fungi - 540; Plants - 5565; Viruses - 3; Other Eukaryotes - 1983 (source: NCBI BLink). & (gnl|cdd|35271 : 164.0) no description available & (q4jl76|myba2_orysa : 114.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (gnl|cdd|34748 : 96.6) no description available & (reliability: 550.0) & (original description: Putative myb7, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01409_198819-202536' '(at5g57620 : 249.0) Encodes a putative transcription factor (MYB36).; myb domain protein 36 (MYB36); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 68 (TAIR:AT5G65790.1); Has 9119 Blast hits to 8411 proteins in 472 species: Archae - 0; Bacteria - 0; Metazoa - 823; Fungi - 478; Plants - 5914; Viruses - 3; Other Eukaryotes - 1901 (source: NCBI BLink). & (gnl|cdd|35271 : 166.0) no description available & (q7xbh4|myb4_orysa : 160.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 498.0) & (original description: Putative MYB36, Description = Transcription factor MYB36, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01555_484302-487297' '(at4g37260 : 215.0) Member of the R2R3 factor gene family.; myb domain protein 73 (MYB73); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 70 (TAIR:AT2G23290.1); Has 8844 Blast hits to 7889 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 797; Fungi - 643; Plants - 5365; Viruses - 3; Other Eukaryotes - 2036 (source: NCBI BLink). & (gnl|cdd|35271 : 165.0) no description available & (p20024|myb1_maize : 110.0) Myb-related protein Zm1 - Zea mays (Maize) & (gnl|cdd|34748 : 90.4) no description available & (reliability: 430.0) & (original description: Putative MYB44, Description = Transcription factor MYB44, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01658_115702-127852' '(at4g32730 : 305.0) Encodes a putative c-myb-like transcription factor with three MYB repeats.; PC-MYB1; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-4 (TAIR:AT5G11510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35271 : 150.0) no description available & (q7xbh4|myb4_orysa : 100.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|34748 : 89.7) no description available & (reliability: 610.0) & (original description: Putative myb15, Description = Transcription factor, PFAM = PF13921;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01746_288061-291709' '(at1g34670 : 253.0) Member of the R2R3 factor gene family.; myb domain protein 93 (MYB93); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 9 (TAIR:AT5G16770.2); Has 9075 Blast hits to 8286 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 899; Fungi - 498; Plants - 5847; Viruses - 6; Other Eukaryotes - 1825 (source: NCBI BLink). & (q50ex6|odo1_pethy : 194.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (gnl|cdd|35271 : 187.0) no description available & (reliability: 506.0) & (original description: Putative MYB1, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01852_384648-388096' '(at1g68930 : 258.0) pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 47331 Blast hits to 14466 proteins in 272 species: Archae - 2; Bacteria - 18; Metazoa - 110; Fungi - 135; Plants - 46381; Viruses - 0; Other Eukaryotes - 685 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative glysoja_014600, Description = Pentatricopeptide repeat-containing protein, PFAM = PF13041;PF01535;PF01535;PF01535;PF12854)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01859_36554-40307' '(at1g75250 : 104.0) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative RL6, Description = Protein RADIALIS-like 6, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01908_133251-136889' '(at3g47600 : 291.0) Encodes a putative transcription factor (MYB94).; myb domain protein 94 (MYB94); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 96 (TAIR:AT5G62470.2); Has 8929 Blast hits to 8284 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 491; Plants - 5808; Viruses - 4; Other Eukaryotes - 1790 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 192.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 178.0) no description available & (reliability: 582.0) & (original description: Putative MYB306, Description = Myb-related protein 306, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01927_884896-888593' '(at2g36890 : 220.0) "Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB38, regulates axillary meristem formation. "; REGULATOR OF AXILLARY MERISTEMS 2 (RAX2); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 37 (TAIR:AT5G23000.1); Has 8785 Blast hits to 8145 proteins in 459 species: Archae - 0; Bacteria - 0; Metazoa - 710; Fungi - 476; Plants - 5916; Viruses - 4; Other Eukaryotes - 1679 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 171.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 167.0) no description available & (reliability: 440.0) & (original description: Putative MYB89, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf01938_570558-580268' '(at1g69560 : 206.0) Encodes LOF2 (LATERAL ORGAN FUSION2), a MYB-domain transcription factor expressed in organ boundaries. Functions in boundary specification, meristem initiation and maintenance, and organ patterning. Also see LOF1 (At1g26780).; myb domain protein 105 (MYB105); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 117 (TAIR:AT1G26780.2); Has 8910 Blast hits to 7943 proteins in 558 species: Archae - 0; Bacteria - 0; Metazoa - 941; Fungi - 606; Plants - 5396; Viruses - 6; Other Eukaryotes - 1961 (source: NCBI BLink). & (gnl|cdd|35271 : 132.0) no description available & (p20024|myb1_maize : 97.8) Myb-related protein Zm1 - Zea mays (Maize) & (reliability: 412.0) & (original description: Putative MYB70, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02030_582181-586225' '(at3g13540 : 203.0) Encodes a member of the MYB family of transcriptional regulators. MYB5 act as a negative regulator of trichome branching and play a role in the correct formation of the seed coat and possibly the formation the underlying endosperm layers. Loss of function mutations have defects in seed coat mucilage and columella cells as well as trichome defects (smaller and reduced number of branches).; myb domain protein 5 (MYB5); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 17 (TAIR:AT3G61250.1); Has 8972 Blast hits to 8275 proteins in 512 species: Archae - 0; Bacteria - 0; Metazoa - 834; Fungi - 461; Plants - 5987; Viruses - 3; Other Eukaryotes - 1687 (source: NCBI BLink). & (p20026|myb1_horvu : 195.0) Myb-related protein Hv1 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 184.0) no description available & (reliability: 406.0) & (original description: Putative myb, Description = MYB19, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02039_440487-447736' '(at5g29000 : 216.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative PHL1, Description = Protein PHR1-LIKE 1, PFAM = PF00249;PF14379)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02066_185088-192853' '(at5g13820 : 389.0) Encodes a protein that specifically binds plant telomeric DNA repeats. It has a single Myb telomeric DNA-binding domain in C-terminus that prefers the sequence TTTAGGG.; telomeric DNA binding protein 1 (TBP1); FUNCTIONS IN: DNA binding, double-stranded telomeric DNA binding; INVOLVED IN: telomere maintenance; LOCATED IN: chromosome, telomeric region, nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Ubiquitin supergroup (InterPro:IPR019955), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 9 (TAIR:AT3G12560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 750.0) & (original description: Putative TRP4, Description = Telomere repeat-binding protein 4, PFAM = )' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02122_105417-109460' '(at3g49142 : 459.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G33990.1). & (q76c99|rf1_orysa : 91.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 890.0) & (original description: Putative ELI1, Description = Pentatricopeptide repeat-containing protein, PFAM = PF13041;PF14432;PF01535;PF01535;PF01535;PF01535)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02139_299936-308402' '(at2g36960 : 623.0) Arabidopsis thaliana myb/SANT domain protein; TSL-kinase interacting protein 1 (TKI1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G39380.1). & (gnl|cdd|39669 : 299.0) no description available & (reliability: 1246.0) & (original description: Putative TKI1, Description = TSL-kinase interacting protein 1, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02145_986299-990290' '(at2g02060 : 114.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G14600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative BnaCnng71310D, Description = BnaCnng71310D protein, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02145_986425-990747' '(at2g02060 : 96.3) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G14600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative kan1-like, Description = Putative transcription repressor KAN1-like, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02207_51820-54843' '(at1g57560 : 214.0) Member of the R2R3 factor gene family.; myb domain protein 50 (MYB50); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 61 (TAIR:AT1G09540.1); Has 8919 Blast hits to 8236 proteins in 472 species: Archae - 0; Bacteria - 0; Metazoa - 751; Fungi - 484; Plants - 5879; Viruses - 6; Other Eukaryotes - 1799 (source: NCBI BLink). & (p20027|myb3_horvu : 205.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 179.0) no description available & (reliability: 428.0) & (original description: Putative MYB6, Description = R2R3-MYB transcription factor MYB6, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02268_775288-778729' '(at1g34670 : 281.0) Member of the R2R3 factor gene family.; myb domain protein 93 (MYB93); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 9 (TAIR:AT5G16770.2); Has 9075 Blast hits to 8286 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 899; Fungi - 498; Plants - 5847; Viruses - 6; Other Eukaryotes - 1825 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 207.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 205.0) no description available & (reliability: 562.0) & (original description: Putative MYB2, Description = Transcription factor MYB44-like protein, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02293_56907-61438' '(at5g56110 : 325.0) Encodes a member of the R2R3 MYB transcription factor gene family that is required for anther development by regulation tapetum development, callose dissolution and exine formation. It acts upstream of MS2.; myb domain protein 103 (MYB103); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p20025|myb38_maize : 191.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 187.0) no description available & (reliability: 650.0) & (original description: Putative MYB80, Description = Transcription factor MYB80, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02315_65590-73741' '(at2g36960 : 624.0) Arabidopsis thaliana myb/SANT domain protein; TSL-kinase interacting protein 1 (TKI1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G39380.1). & (gnl|cdd|39669 : 286.0) no description available & (reliability: 1248.0) & (original description: Putative TKI1, Description = TSL-kinase interacting protein 1, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02354_1169900-1181187' '(at4g32730 : 627.0) Encodes a putative c-myb-like transcription factor with three MYB repeats.; PC-MYB1; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-4 (TAIR:AT5G11510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35271 : 163.0) no description available & (p93417|gam1_orysa : 110.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 97.0) no description available & (reliability: 1254.0) & (original description: Putative cmyb, Description = Myb-related protein 3R-1, PFAM = PF00249;PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02375_1236566-1240037' '(at3g49690 : 233.0) "Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB84, regulates axillary meristem formation. "; myb domain protein 84 (MYB84); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 68 (TAIR:AT5G65790.1); Has 8670 Blast hits to 8092 proteins in 466 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 404; Plants - 5917; Viruses - 3; Other Eukaryotes - 1656 (source: NCBI BLink). & (gnl|cdd|35271 : 170.0) no description available & (q7xbh4|myb4_orysa : 165.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 466.0) & (original description: Putative MYB1, Description = R2R3-MYB transcription factor MYB1.2, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02385_13086-16683' '(at5g10280 : 208.0) Encodes a putative transcription factor (MYB92).; myb domain protein 92 (MYB92); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 53 (TAIR:AT5G65230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35271 : 191.0) no description available & (q50ex6|odo1_pethy : 190.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (reliability: 416.0) & (original description: Putative myb1, Description = MYB family protein, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02466_105499-112713' '(at5g02320 : 370.0) Encodes a putative c-MYB-like transcription factor of the MYB3R factor gene family (MYB3R5).; myb domain protein 3r-5 (MYB3R-5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-3 (TAIR:AT3G09370.1). & (gnl|cdd|35271 : 160.0) no description available & (p93417|gam1_orysa : 112.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 103.0) no description available & (reliability: 740.0) & (original description: Putative myb15, Description = Transcription factor, PFAM = PF00249;PF13921)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02483_259911-263874' '(at5g15310 : 295.0) Member of the R2R3 factor gene family.; myb domain protein 16 (MYB16); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 106 (TAIR:AT3G01140.1); Has 8674 Blast hits to 8179 proteins in 471 species: Archae - 0; Bacteria - 0; Metazoa - 652; Fungi - 457; Plants - 5850; Viruses - 4; Other Eukaryotes - 1711 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 204.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 196.0) no description available & (reliability: 590.0) & (original description: Putative myb27, Description = MYB27 protein, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02509_311969-316071' '(at3g08500 : 219.0) Encodes a putative R2R3-type MYB transcription factor (MYB83).; myb domain protein 83 (MYB83); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 46 (TAIR:AT5G12870.1); Has 9098 Blast hits to 8506 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 787; Fungi - 464; Plants - 5991; Viruses - 4; Other Eukaryotes - 1852 (source: NCBI BLink). & (p20027|myb3_horvu : 188.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 170.0) no description available & (reliability: 438.0) & (original description: Putative MYB3, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02537_1612584-1616262' '(at1g34670 : 296.0) Member of the R2R3 factor gene family.; myb domain protein 93 (MYB93); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 9 (TAIR:AT5G16770.2); Has 9075 Blast hits to 8286 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 899; Fungi - 498; Plants - 5847; Viruses - 6; Other Eukaryotes - 1825 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 208.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 194.0) no description available & (reliability: 592.0) & (original description: Putative Myb48, Description = P-type R2R3 Myb protein, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02541_958254-961177' '(at3g12720 : 167.0) Member of the R2R3 factor gene family.; myb domain protein 67 (MYB67); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 50 (TAIR:AT1G57560.1); Has 8912 Blast hits to 8278 proteins in 476 species: Archae - 0; Bacteria - 2; Metazoa - 680; Fungi - 532; Plants - 5859; Viruses - 3; Other Eukaryotes - 1836 (source: NCBI BLink). & (gnl|cdd|35271 : 154.0) no description available & (p20027|myb3_horvu : 149.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (reliability: 334.0) & (original description: Putative myb18, Description = Myb-related protein Hv33, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02658_383795-387254' '(at4g38620 : 297.0) Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. MYB4 binds to its own promoter and represses its own expression. Nuclear localization of MYB4 depends on the action of the beta importin SAD2.; myb domain protein 4 (MYB4); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 32 (TAIR:AT4G34990.1); Has 9208 Blast hits to 8453 proteins in 515 species: Archae - 0; Bacteria - 0; Metazoa - 855; Fungi - 510; Plants - 6018; Viruses - 3; Other Eukaryotes - 1822 (source: NCBI BLink). & (p20025|myb38_maize : 280.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 193.0) no description available & (reliability: 594.0) & (original description: Putative MYB308, Description = Myb-related protein 308, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02724_507448-511215' '(q7xbh4|myb4_orysa : 221.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (at3g23250 : 219.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35271 : 179.0) no description available & (reliability: 438.0) & (original description: Putative lbm1, Description = Myb-related transcription factor LBM1, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02774_172197-176635' '(at1g66230 : 261.0) Encodes a putative transcription factor (MYB20).; myb domain protein 20 (MYB20); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 43 (TAIR:AT5G16600.1); Has 8410 Blast hits to 7811 proteins in 453 species: Archae - 0; Bacteria - 0; Metazoa - 663; Fungi - 296; Plants - 5767; Viruses - 4; Other Eukaryotes - 1680 (source: NCBI BLink). & (q50ex6|odo1_pethy : 249.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (gnl|cdd|35271 : 189.0) no description available & (reliability: 522.0) & (original description: Putative Myb2, Description = Myb-related transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02869_1108142-1112163' '(at4g21440 : 258.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p20025|myb38_maize : 211.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 199.0) no description available & (reliability: 516.0) & (original description: Putative MYB85, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf02972_568398-572406' '(at3g13540 : 200.0) Encodes a member of the MYB family of transcriptional regulators. MYB5 act as a negative regulator of trichome branching and play a role in the correct formation of the seed coat and possibly the formation the underlying endosperm layers. Loss of function mutations have defects in seed coat mucilage and columella cells as well as trichome defects (smaller and reduced number of branches).; myb domain protein 5 (MYB5); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 17 (TAIR:AT3G61250.1); Has 8972 Blast hits to 8275 proteins in 512 species: Archae - 0; Bacteria - 0; Metazoa - 834; Fungi - 461; Plants - 5987; Viruses - 3; Other Eukaryotes - 1687 (source: NCBI BLink). & (p20026|myb1_horvu : 193.0) Myb-related protein Hv1 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 175.0) no description available & (reliability: 400.0) & (original description: Putative myb, Description = Transcription factor MYB 12, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03005_13734-17882' '(at3g08500 : 186.0) Encodes a putative R2R3-type MYB transcription factor (MYB83).; myb domain protein 83 (MYB83); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 46 (TAIR:AT5G12870.1); Has 9098 Blast hits to 8506 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 787; Fungi - 464; Plants - 5991; Viruses - 4; Other Eukaryotes - 1852 (source: NCBI BLink). & (p20027|myb3_horvu : 154.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 144.0) no description available & (reliability: 372.0) & (original description: Putative myb18, Description = Transcription factor MYB86, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03018_307047-311688' '(at1g69560 : 214.0) Encodes LOF2 (LATERAL ORGAN FUSION2), a MYB-domain transcription factor expressed in organ boundaries. Functions in boundary specification, meristem initiation and maintenance, and organ patterning. Also see LOF1 (At1g26780).; myb domain protein 105 (MYB105); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 117 (TAIR:AT1G26780.2); Has 8910 Blast hits to 7943 proteins in 558 species: Archae - 0; Bacteria - 0; Metazoa - 941; Fungi - 606; Plants - 5396; Viruses - 6; Other Eukaryotes - 1961 (source: NCBI BLink). & (gnl|cdd|35271 : 140.0) no description available & (p20024|myb1_maize : 103.0) Myb-related protein Zm1 - Zea mays (Maize) & (reliability: 428.0) & (original description: Putative MYB70, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03040_93523-96969' '(at4g28110 : 260.0) Member of the R2R3 factor gene family. Expression is induced in response to dessication, ABA and salt treatment. Overexpression of Myb41 results in abnormal cuticle development and decreased cell expansion.; myb domain protein 41 (MYB41); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: MYB-like 102 (TAIR:AT4G21440.1); Has 9017 Blast hits to 8357 proteins in 551 species: Archae - 0; Bacteria - 0; Metazoa - 832; Fungi - 495; Plants - 5900; Viruses - 4; Other Eukaryotes - 1786 (source: NCBI BLink). & (p20025|myb38_maize : 213.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 191.0) no description available & (reliability: 520.0) & (original description: Putative MYB41, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03049_617826-621132' '(at5g49620 : 245.0) Member of the R2R3 factor gene family.; myb domain protein 78 (MYB78); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 108 (TAIR:AT3G06490.1). & (gnl|cdd|35271 : 167.0) no description available & (q4jl76|myba2_orysa : 148.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 490.0) & (original description: Putative myb3, Description = Myb factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03049_617913-713710' '(at5g49620 : 243.0) Member of the R2R3 factor gene family.; myb domain protein 78 (MYB78); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 108 (TAIR:AT3G06490.1). & (gnl|cdd|35271 : 160.0) no description available & (p93417|gam1_orysa : 151.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (reliability: 486.0) & (original description: Putative Myb42, Description = Typical P-type R2R3 Myb protein, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03145_131580-135020' '(at1g68320 : 257.0) putative transcription factor: R2R3-MYB transcription family. Involved in regulation of phosphate starvation responses and gibberellic acid biosynthesis.; myb domain protein 62 (MYB62); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 116 (TAIR:AT1G25340.1); Has 8752 Blast hits to 8056 proteins in 466 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 492; Plants - 5746; Viruses - 3; Other Eukaryotes - 1772 (source: NCBI BLink). & (gnl|cdd|35271 : 175.0) no description available & (q4jl76|myba2_orysa : 156.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 514.0) & (original description: Putative MYB1, Description = Myb transcription factor 1, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03188_598465-601178' '(at2g23290 : 220.0) Member of the R2R3 factor gene family.; myb domain protein 70 (MYB70); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 73 (TAIR:AT4G37260.1); Has 8736 Blast hits to 7850 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 756; Fungi - 600; Plants - 5377; Viruses - 3; Other Eukaryotes - 2000 (source: NCBI BLink). & (gnl|cdd|35271 : 164.0) no description available & (p93417|gam1_orysa : 110.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 88.9) no description available & (reliability: 440.0) & (original description: Putative MYB44, Description = Transcription factor MYB44, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03236_303781-308894' '(at3g47600 : 281.0) Encodes a putative transcription factor (MYB94).; myb domain protein 94 (MYB94); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 96 (TAIR:AT5G62470.2); Has 8929 Blast hits to 8284 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 491; Plants - 5808; Viruses - 4; Other Eukaryotes - 1790 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 180.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 174.0) no description available & (reliability: 562.0) & (original description: Putative MYB8, Description = R2R3-MYB protein, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03256_234367-237535' '(at2g45260 : 284.0) Plant protein of unknown function (DUF641); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF641) (TAIR:AT4G34080.1); Has 407 Blast hits to 396 proteins in 44 species: Archae - 0; Bacteria - 10; Metazoa - 42; Fungi - 9; Plants - 286; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|68434 : 83.5) no description available & (reliability: 544.0) & (original description: Putative At2g30380, Description = BnaA05g04650D protein, PFAM = PF04859)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03326_304485-308047' '(at3g02940 : 229.0) Encodes a putative transcription factor (MYB107).; myb domain protein 107 (MYB107); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 9 (TAIR:AT5G16770.2); Has 9059 Blast hits to 8356 proteins in 507 species: Archae - 0; Bacteria - 0; Metazoa - 783; Fungi - 490; Plants - 6000; Viruses - 3; Other Eukaryotes - 1783 (source: NCBI BLink). & (p20025|myb38_maize : 202.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 198.0) no description available & (reliability: 458.0) & (original description: Putative MYB101, Description = Transcription factor MYB101, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03444_550241-554665' '(at5g14340 : 243.0) Member of the R2R3 factor gene family.; myb domain protein 40 (MYB40); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 20 (TAIR:AT1G66230.1); Has 8800 Blast hits to 8097 proteins in 536 species: Archae - 0; Bacteria - 0; Metazoa - 861; Fungi - 444; Plants - 5790; Viruses - 6; Other Eukaryotes - 1699 (source: NCBI BLink). & (q50ex6|odo1_pethy : 217.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (gnl|cdd|35271 : 177.0) no description available & (reliability: 486.0) & (original description: Putative MYB315, Description = Myb-related protein 315, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03482_222971-226350' '(at3g47600 : 271.0) Encodes a putative transcription factor (MYB94).; myb domain protein 94 (MYB94); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 96 (TAIR:AT5G62470.2); Has 8929 Blast hits to 8284 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 491; Plants - 5808; Viruses - 4; Other Eukaryotes - 1790 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 192.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 186.0) no description available & (gnl|cdd|34748 : 80.0) no description available & (reliability: 542.0) & (original description: Putative MYB306, Description = Myb-related protein 306, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03570_519114-522965' '(at3g23250 : 250.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 230.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 184.0) no description available & (reliability: 500.0) & (original description: Putative myb1, Description = Myb-related transcription factor LBM3, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03716_498272-501544' '(at5g62470 : 273.0) Encodes a R2R3 type Myb transcription factor whose expression is strongly induced by abscisic acid. Mediates abscisic acid signaling during drought stress response.; myb domain protein 96 (MYB96); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 94 (TAIR:AT3G47600.1); Has 9691 Blast hits to 8398 proteins in 583 species: Archae - 0; Bacteria - 56; Metazoa - 899; Fungi - 554; Plants - 5844; Viruses - 4; Other Eukaryotes - 2334 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 184.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 175.0) no description available & (reliability: 546.0) & (original description: Putative hsr1, Description = Myb-related protein 306, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03781_44608-47426' '(at4g37260 : 213.0) Member of the R2R3 factor gene family.; myb domain protein 73 (MYB73); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 70 (TAIR:AT2G23290.1); Has 8844 Blast hits to 7889 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 797; Fungi - 643; Plants - 5365; Viruses - 3; Other Eukaryotes - 2036 (source: NCBI BLink). & (gnl|cdd|35271 : 153.0) no description available & (p93417|gam1_orysa : 105.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 92.0) no description available & (reliability: 426.0) & (original description: Putative MYB44, Description = Transcription factor MYB44, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03797_60171-67305' '(at1g14350 : 451.0) Encodes a putative MYB transcription factor involved in stomata development, loss of FLP activity results in a failure of guard mother cells (GMCs) to adopt the guard cell fate, thus they continue to divide resulting in abnormal stomata consisting of clusters of numerous guard cell-like cells. This phenotype is enhanced in double mutants with MYB88.; FOUR LIPS (FLP); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 88 (TAIR:AT2G02820.2); Has 8538 Blast hits to 7627 proteins in 543 species: Archae - 0; Bacteria - 2; Metazoa - 904; Fungi - 528; Plants - 5146; Viruses - 6; Other Eukaryotes - 1952 (source: NCBI BLink). & (gnl|cdd|35271 : 121.0) no description available & (p20027|myb3_horvu : 82.4) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|34748 : 80.0) no description available & (reliability: 902.0) & (original description: Putative myb, Description = MYB18, PFAM = PF13921)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03929_340217-343859' '(at4g21440 : 246.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p20025|myb38_maize : 206.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 194.0) no description available & (reliability: 492.0) & (original description: Putative MYB19, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03934_15033-22419' '(at4g28610 : 227.0) Similar to phosphate starvation response gene from Chlamydomonas. Weakly responsive to phosphate starvation. Acts upstream of PHO2 in phosphate signaling.; phosphate starvation response 1 (PHR1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G20400.1); Has 1692 Blast hits to 1675 proteins in 68 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 2; Plants - 1663; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative PHR1, Description = Protein PHOSPHATE STARVATION RESPONSE 1, PFAM = PF14379;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf03965_367740-371126' '(p10290|mybc_maize : 195.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (at1g22640 : 193.0) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression; myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (gnl|cdd|35271 : 177.0) no description available & (reliability: 386.0) & (original description: Putative MYB6, Description = MYB6, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04082_815527-819390' '(at1g26780 : 233.0) Encodes LOF1 (LATERAL ORGAN FUSION1), a MYB-domain transcription factor expressed in organ boundaries. Functions in boundary specification, meristem initiation and maintenance, and organ patterning. Also see LOF2 (At1g69560).; myb domain protein 117 (MYB117); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 105 (TAIR:AT1G69560.1); Has 8894 Blast hits to 7964 proteins in 558 species: Archae - 0; Bacteria - 0; Metazoa - 920; Fungi - 607; Plants - 5396; Viruses - 5; Other Eukaryotes - 1966 (source: NCBI BLink). & (gnl|cdd|35271 : 142.0) no description available & (p20024|myb1_maize : 100.0) Myb-related protein Zm1 - Zea mays (Maize) & (reliability: 466.0) & (original description: Putative RCP1, Description = R2R3-MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04113_1760126-1763133' '(at1g75250 : 110.0) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative RL6, Description = Protein RADIALIS-like 6, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04117_224593-227759' '(at3g23250 : 218.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 212.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 178.0) no description available & (reliability: 436.0) & (original description: Putative MYB50, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04117_760345-764198' '(at1g22640 : 261.0) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression; myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (p20025|myb38_maize : 250.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 204.0) no description available & (reliability: 522.0) & (original description: Putative MYB330, Description = Myb-related protein 330, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04122_362564-366010' '(at4g21440 : 310.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 213.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 200.0) no description available & (reliability: 620.0) & (original description: Putative myb1, Description = MYB1, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04133_20739-24730' '(at3g01140 : 320.0) Encodes a MIXTA-like MYB gene NOECK (NOK). Loss of function mutations show an increased number of branchpoints in leaf trichomes suggesting a role in negative regulation of trichome branching.; myb domain protein 106 (MYB106); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: trichome branching, regulation of transcription, DNA-dependent; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 16 (TAIR:AT5G15310.1); Has 8850 Blast hits to 8247 proteins in 477 species: Archae - 0; Bacteria - 0; Metazoa - 708; Fungi - 505; Plants - 5831; Viruses - 3; Other Eukaryotes - 1803 (source: NCBI BLink). & (p20025|myb38_maize : 204.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 200.0) no description available & (reliability: 640.0) & (original description: Putative myb27, Description = MYB27 protein, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04193_562985-566891' '(at3g23250 : 207.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p20024|myb1_maize : 189.0) Myb-related protein Zm1 - Zea mays (Maize) & (gnl|cdd|35271 : 168.0) no description available & (reliability: 414.0) & (original description: Putative lbm1, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04377_465070-469370' '(at5g58850 : 183.0) Encodes a putative transcription factor, member of the R2R3 factor gene family (MYB119).; myb domain protein 119 (MYB119); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: egg cell; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 64 (TAIR:AT5G11050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35271 : 136.0) no description available & (q4jl76|myba2_orysa : 99.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (gnl|cdd|34748 : 86.6) no description available & (reliability: 366.0) & (original description: Putative MYB18, Description = R2R3-MYB protein, PFAM = PF13921)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04382_75208-80810' '(at5g13820 : 366.0) Encodes a protein that specifically binds plant telomeric DNA repeats. It has a single Myb telomeric DNA-binding domain in C-terminus that prefers the sequence TTTAGGG.; telomeric DNA binding protein 1 (TBP1); FUNCTIONS IN: DNA binding, double-stranded telomeric DNA binding; INVOLVED IN: telomere maintenance; LOCATED IN: chromosome, telomeric region, nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Ubiquitin supergroup (InterPro:IPR019955), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 9 (TAIR:AT3G12560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 672.0) & (original description: Putative TRP4, Description = Telomere repeat-binding protein 4, PFAM = )' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04406_162528-167099' '(at5g52260 : 179.0) Member of the R2R3 factor gene family.; myb domain protein 19 (MYB19); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 18 (TAIR:AT4G25560.1); Has 8937 Blast hits to 8289 proteins in 544 species: Archae - 0; Bacteria - 0; Metazoa - 775; Fungi - 488; Plants - 5833; Viruses - 3; Other Eukaryotes - 1838 (source: NCBI BLink). & (gnl|cdd|35271 : 172.0) no description available & (p20024|myb1_maize : 158.0) Myb-related protein Zm1 - Zea mays (Maize) & (reliability: 358.0) & (original description: Putative gpm41, Description = Transcription factor MYB86, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04596_28848-37576' '(at1g51540 : 529.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G27220.1); Has 1998 Blast hits to 1729 proteins in 252 species: Archae - 27; Bacteria - 371; Metazoa - 1276; Fungi - 25; Plants - 123; Viruses - 45; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|39642 : 100.0) no description available & (reliability: 1006.0) & (original description: Putative At3g27220, Description = Kelch repeat-containing protein At3g27220, PFAM = PF13964;PF13418;PF13418)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04629_328632-332207' '(at4g39250 : 102.0) RAD-like 1 (RL1); CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G21650.1); Has 592 Blast hits to 591 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 0; Plants - 470; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative RAD2, Description = RADIALIS, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04632_51951-56676' '(at3g04030 : 328.0) Homeodomain-like superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-related protein 1 (TAIR:AT5G18240.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative MYR2, Description = Myb-related protein 2, PFAM = PF14379;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04675_46448-49627' '(at2g36890 : 178.0) "Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB38, regulates axillary meristem formation. "; REGULATOR OF AXILLARY MERISTEMS 2 (RAX2); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 37 (TAIR:AT5G23000.1); Has 8785 Blast hits to 8145 proteins in 459 species: Archae - 0; Bacteria - 0; Metazoa - 710; Fungi - 476; Plants - 5916; Viruses - 4; Other Eukaryotes - 1679 (source: NCBI BLink). & (gnl|cdd|35271 : 165.0) no description available & (p20025|myb38_maize : 157.0) Myb-related protein Zm38 - Zea mays (Maize) & (reliability: 356.0) & (original description: Putative scMYB25, Description = ScMYB25 protein, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04684_432463-436359' '(at4g38620 : 258.0) Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. MYB4 binds to its own promoter and represses its own expression. Nuclear localization of MYB4 depends on the action of the beta importin SAD2.; myb domain protein 4 (MYB4); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 32 (TAIR:AT4G34990.1); Has 9208 Blast hits to 8453 proteins in 515 species: Archae - 0; Bacteria - 0; Metazoa - 855; Fungi - 510; Plants - 6018; Viruses - 3; Other Eukaryotes - 1822 (source: NCBI BLink). & (p20026|myb1_horvu : 250.0) Myb-related protein Hv1 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 207.0) no description available & (reliability: 516.0) & (original description: Putative MYB2, Description = R2R3-MYB protein, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04700_348469-352196' '(at5g57620 : 217.0) Encodes a putative transcription factor (MYB36).; myb domain protein 36 (MYB36); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 68 (TAIR:AT5G65790.1); Has 9119 Blast hits to 8411 proteins in 472 species: Archae - 0; Bacteria - 0; Metazoa - 823; Fungi - 478; Plants - 5914; Viruses - 3; Other Eukaryotes - 1901 (source: NCBI BLink). & (gnl|cdd|35271 : 169.0) no description available & (q7xbh4|myb4_orysa : 160.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 434.0) & (original description: Putative MYB1, Description = R2R3-MYB transcription factor MYB1.2, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04784_13912-16172' '(at1g75250 : 103.0) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative RAD, Description = Transcription factor RADIALIS, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04804_135759-143075' '(at5g52260 : 184.0) Member of the R2R3 factor gene family.; myb domain protein 19 (MYB19); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 18 (TAIR:AT4G25560.1); Has 8937 Blast hits to 8289 proteins in 544 species: Archae - 0; Bacteria - 0; Metazoa - 775; Fungi - 488; Plants - 5833; Viruses - 3; Other Eukaryotes - 1838 (source: NCBI BLink). & (gnl|cdd|35271 : 170.0) no description available & (p20027|myb3_horvu : 160.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (reliability: 368.0) & (original description: Putative scMYB6, Description = ScMYB6 protein, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf04819_24266-109255' '(at5g49330 : 203.0) Member of the R2R3 factor gene family.; myb domain protein 111 (MYB111); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 12 (TAIR:AT2G47460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p27898|mybp_maize : 195.0) Myb-related protein P - Zea mays (Maize) & (gnl|cdd|35271 : 157.0) no description available & (reliability: 406.0) & (original description: Putative MYB12, Description = MYB12, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05056_3204-9715' '(at4g32730 : 250.0) Encodes a putative c-myb-like transcription factor with three MYB repeats.; PC-MYB1; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-4 (TAIR:AT5G11510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35271 : 151.0) no description available & (p93417|gam1_orysa : 111.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 96.2) no description available & (reliability: 500.0) & (original description: Putative MYB5, Description = MYB DNA binding protein/ transcription factor-like protein, PFAM = PF00249;PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05060_269053-272543' '(at3g47600 : 263.0) Encodes a putative transcription factor (MYB94).; myb domain protein 94 (MYB94); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 96 (TAIR:AT5G62470.2); Has 8929 Blast hits to 8284 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 491; Plants - 5808; Viruses - 4; Other Eukaryotes - 1790 (source: NCBI BLink). & (gnl|cdd|35271 : 178.0) no description available & (q7xbh4|myb4_orysa : 175.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 526.0) & (original description: Putative hsr1, Description = Myb-related protein 306, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05082_32413-35731' '(at1g75250 : 103.0) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative fsm1, Description = RADIALIS, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05324_18992-22498' '(at5g14340 : 223.0) Member of the R2R3 factor gene family.; myb domain protein 40 (MYB40); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 20 (TAIR:AT1G66230.1); Has 8800 Blast hits to 8097 proteins in 536 species: Archae - 0; Bacteria - 0; Metazoa - 861; Fungi - 444; Plants - 5790; Viruses - 6; Other Eukaryotes - 1699 (source: NCBI BLink). & (p80073|myb2_phypa : 206.0) Myb-related protein Pp2 - Physcomitrella patens (Moss) & (gnl|cdd|35271 : 178.0) no description available & (reliability: 446.0) & (original description: Putative MYB48, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05363_204792-207964' '(at4g37260 : 175.0) Member of the R2R3 factor gene family.; myb domain protein 73 (MYB73); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 70 (TAIR:AT2G23290.1); Has 8844 Blast hits to 7889 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 797; Fungi - 643; Plants - 5365; Viruses - 3; Other Eukaryotes - 2036 (source: NCBI BLink). & (gnl|cdd|35271 : 153.0) no description available & (p93417|gam1_orysa : 111.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 86.2) no description available & (reliability: 350.0) & (original description: Putative myb11, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05368_94541-99081' '(at5g02320 : 295.0) Encodes a putative c-MYB-like transcription factor of the MYB3R factor gene family (MYB3R5).; myb domain protein 3r-5 (MYB3R-5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-3 (TAIR:AT3G09370.1). & (gnl|cdd|35271 : 161.0) no description available & (p93417|gam1_orysa : 110.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 99.3) no description available & (reliability: 590.0) & (original description: Putative myb, Description = MYB transcription factor R3 type, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05516_61187-77696' '(at4g28610 : 220.0) Similar to phosphate starvation response gene from Chlamydomonas. Weakly responsive to phosphate starvation. Acts upstream of PHO2 in phosphate signaling.; phosphate starvation response 1 (PHR1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G20400.1); Has 1692 Blast hits to 1675 proteins in 68 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 2; Plants - 1663; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 430.0) & (original description: Putative PHL1, Description = Protein PHR1-LIKE 1, PFAM = PF00249;PF14379)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05530_106817-110307' '(at2g36890 : 227.0) "Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB38, regulates axillary meristem formation. "; REGULATOR OF AXILLARY MERISTEMS 2 (RAX2); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 37 (TAIR:AT5G23000.1); Has 8785 Blast hits to 8145 proteins in 459 species: Archae - 0; Bacteria - 0; Metazoa - 710; Fungi - 476; Plants - 5916; Viruses - 4; Other Eukaryotes - 1679 (source: NCBI BLink). & (gnl|cdd|35271 : 172.0) no description available & (q7xbh4|myb4_orysa : 171.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 454.0) & (original description: Putative myb, Description = MYB7, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05541_47138-50309' '(at3g12720 : 234.0) Member of the R2R3 factor gene family.; myb domain protein 67 (MYB67); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 50 (TAIR:AT1G57560.1); Has 8912 Blast hits to 8278 proteins in 476 species: Archae - 0; Bacteria - 2; Metazoa - 680; Fungi - 532; Plants - 5859; Viruses - 3; Other Eukaryotes - 1836 (source: NCBI BLink). & (p20027|myb3_horvu : 205.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 180.0) no description available & (reliability: 468.0) & (original description: Putative MS35, Description = Transcription factor MYB86, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05710_192233-195657' '(at4g38620 : 311.0) Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. MYB4 binds to its own promoter and represses its own expression. Nuclear localization of MYB4 depends on the action of the beta importin SAD2.; myb domain protein 4 (MYB4); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 32 (TAIR:AT4G34990.1); Has 9208 Blast hits to 8453 proteins in 515 species: Archae - 0; Bacteria - 0; Metazoa - 855; Fungi - 510; Plants - 6018; Viruses - 3; Other Eukaryotes - 1822 (source: NCBI BLink). & (p20026|myb1_horvu : 300.0) Myb-related protein Hv1 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 195.0) no description available & (reliability: 622.0) & (original description: Putative MYB1, Description = Myb-related protein Hv1, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05734_46170-49778' '(at3g13890 : 144.0) Encodes a putative transcription factor (MYB26).; myb domain protein 26 (MYB26); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 103 (TAIR:AT1G63910.1); Has 8800 Blast hits to 8217 proteins in 478 species: Archae - 0; Bacteria - 0; Metazoa - 734; Fungi - 453; Plants - 5838; Viruses - 3; Other Eukaryotes - 1772 (source: NCBI BLink). & (p20027|myb3_horvu : 136.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 136.0) no description available & (reliability: 288.0) & (original description: Putative myb18, Description = MYB transcription factor, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05811_693438-699449' '(at1g07540 : 374.0) Arabidopsis thaliana telomere-binding protein, putative (At1g07540); TRF-like 2 (TRFL2); FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 1 (TAIR:AT3G46590.2); Has 350 Blast hits to 338 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 4; Plants - 309; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 748.0) & (original description: Putative TRP5, Description = Telomere repeat-binding protein 5, PFAM = )' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05836_542619-548812' '(at3g55730 : 278.0) putative transcription factor MYB109 (MYB109) mRNA,; myb domain protein 109 (MYB109); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 25 (TAIR:AT2G39880.1); Has 8907 Blast hits to 7929 proteins in 513 species: Archae - 0; Bacteria - 2; Metazoa - 870; Fungi - 593; Plants - 5452; Viruses - 6; Other Eukaryotes - 1984 (source: NCBI BLink). & (gnl|cdd|35271 : 162.0) no description available & (q4jl76|myba2_orysa : 110.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (gnl|cdd|34748 : 101.0) no description available & (reliability: 556.0) & (original description: Putative myb7, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05867_273385-277166' '(at4g21440 : 294.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p20025|myb38_maize : 212.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 194.0) no description available & (reliability: 588.0) & (original description: Putative myb1, Description = MYB1, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05911_166022-171507' '(at2g42660 : 89.4) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G38300.1); Has 1621 Blast hits to 1617 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1607; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative PGSC0003DMG400028830, Description = Putative Myb family transcription factor, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf05998_168194-172107' '(at1g34670 : 201.0) Member of the R2R3 factor gene family.; myb domain protein 93 (MYB93); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 9 (TAIR:AT5G16770.2); Has 9075 Blast hits to 8286 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 899; Fungi - 498; Plants - 5847; Viruses - 6; Other Eukaryotes - 1825 (source: NCBI BLink). & (p20026|myb1_horvu : 186.0) Myb-related protein Hv1 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 186.0) no description available & (reliability: 402.0) & (original description: Putative myb27, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf06009_13117-16917' '(at1g26580 : 173.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: ELM2 domain-containing protein (TAIR:AT2G03470.1); Has 161 Blast hits to 161 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 4; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative UGD1, Description = AT-rich interactive domain-containing 2-like protein, PFAM = )' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf06155_38910-45775' '(at4g28610 : 228.0) Similar to phosphate starvation response gene from Chlamydomonas. Weakly responsive to phosphate starvation. Acts upstream of PHO2 in phosphate signaling.; phosphate starvation response 1 (PHR1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G20400.1); Has 1692 Blast hits to 1675 proteins in 68 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 2; Plants - 1663; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative csp1, Description = CDPK substrate protein 1, PFAM = PF14379;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf06349_341769-347352' '(at3g27810 : 230.0) Encodes a member of the R2R3-MYB transcription factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development.; myb domain protein 21 (MYB21); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 24 (TAIR:AT5G40350.1); Has 8792 Blast hits to 8049 proteins in 467 species: Archae - 0; Bacteria - 0; Metazoa - 785; Fungi - 472; Plants - 5782; Viruses - 6; Other Eukaryotes - 1747 (source: NCBI BLink). & (gnl|cdd|35271 : 166.0) no description available & (q4jl76|myba2_orysa : 151.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 460.0) & (original description: Putative myb8, Description = MYB8 protein, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf06412_401018-417647' '(at2g47210 : 514.0) myb-like transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: N-terminal protein myristoylation, negative regulation of transcription, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), DNA methyltransferase 1-associated 1 (InterPro:IPR008468); Has 383 Blast hits to 375 proteins in 190 species: Archae - 0; Bacteria - 2; Metazoa - 140; Fungi - 145; Plants - 43; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|37867 : 319.0) no description available & (reliability: 1028.0) & (original description: Putative SWC4, Description = SWR1-complex protein 4, PFAM = PF16282;PF05499)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf06436_235995-240162' '(at3g61250 : 325.0) Member of the R2R3 factor gene family.; myb domain protein 17 (MYB17); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 16 (TAIR:AT5G15310.1); Has 8810 Blast hits to 8210 proteins in 476 species: Archae - 0; Bacteria - 0; Metazoa - 695; Fungi - 480; Plants - 5869; Viruses - 3; Other Eukaryotes - 1763 (source: NCBI BLink). & (q50ex6|odo1_pethy : 203.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (gnl|cdd|35271 : 194.0) no description available & (reliability: 650.0) & (original description: Putative myb9, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf06482_570311-573393' '(at2g37630 : 365.0) Encodes a MYB-domain protein involved in specification of the leaf proximodistal axis. Mutation results in lobed and dissected leaves with a characteristic asymmetry. Homologous to the Antirrhinum PHANTASTICA (PHAN) and maize ROUGH SHEATH2 (RS2) genes Asymmetric placement of auxin response at the distal leaf tip precedes visible asymmetric leaf growth. Acts alongside AXR1 to exclude BP expression in leaves and with PIN1 to repress BP and promote lateral organ growth. Interacts physically with AS2 to form a complex that binds to the BP promoter and silences BP. Also functions as a regulator of the plant immune response.; ASYMMETRIC LEAVES 1 (AS1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 113 (TAIR:AT1G66370.1); Has 8693 Blast hits to 7877 proteins in 569 species: Archae - 0; Bacteria - 8; Metazoa - 942; Fungi - 511; Plants - 5476; Viruses - 6; Other Eukaryotes - 1750 (source: NCBI BLink). & (gnl|cdd|35271 : 125.0) no description available & (p93417|gam1_orysa : 101.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (reliability: 730.0) & (original description: Putative phan, Description = MYB-related transcription factor, PFAM = PF13921)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf06560_1-2190' '(at3g30210 : 148.0) Encodes a putative transcription factor, member of the R2R3 factor gene family (MYB121).; myb domain protein 121 (MYB121); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 305 (TAIR:AT3G24310.1); Has 9169 Blast hits to 8390 proteins in 555 species: Archae - 0; Bacteria - 0; Metazoa - 942; Fungi - 521; Plants - 5868; Viruses - 6; Other Eukaryotes - 1832 (source: NCBI BLink). & (gnl|cdd|35271 : 129.0) no description available & (q4jl76|myba2_orysa : 125.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 296.0) & (original description: Putative MYB14, Description = MYB-related transcription factor, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf06616_405030-409652' '(at5g49620 : 244.0) Member of the R2R3 factor gene family.; myb domain protein 78 (MYB78); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 108 (TAIR:AT3G06490.1). & (gnl|cdd|35271 : 178.0) no description available & (q4jl76|myba2_orysa : 140.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 488.0) & (original description: Putative myb7, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf06688_178049-186787' '(at5g29000 : 219.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative csp1, Description = Myb family transcription factor APL, PFAM = PF00249;PF14379)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf06736_840045-843210' '(at3g12720 : 237.0) Member of the R2R3 factor gene family.; myb domain protein 67 (MYB67); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 50 (TAIR:AT1G57560.1); Has 8912 Blast hits to 8278 proteins in 476 species: Archae - 0; Bacteria - 2; Metazoa - 680; Fungi - 532; Plants - 5859; Viruses - 3; Other Eukaryotes - 1836 (source: NCBI BLink). & (p20027|myb3_horvu : 209.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 185.0) no description available & (reliability: 474.0) & (original description: Putative MYB83, Description = MYB transcription factor 83, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf06795_405006-409402' '(at5g15310 : 247.0) Member of the R2R3 factor gene family.; myb domain protein 16 (MYB16); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 106 (TAIR:AT3G01140.1); Has 8674 Blast hits to 8179 proteins in 471 species: Archae - 0; Bacteria - 0; Metazoa - 652; Fungi - 457; Plants - 5850; Viruses - 4; Other Eukaryotes - 1711 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 195.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 189.0) no description available & (gnl|cdd|34748 : 80.4) no description available & (reliability: 494.0) & (original description: Putative myb9, Description = Mixta, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf06851_73145-77073' '(at1g16490 : 215.0) Member of the R2R3 factor gene family.; myb domain protein 58 (MYB58); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 63 (TAIR:AT1G79180.1); Has 8863 Blast hits to 8152 proteins in 473 species: Archae - 0; Bacteria - 3; Metazoa - 752; Fungi - 456; Plants - 5848; Viruses - 6; Other Eukaryotes - 1798 (source: NCBI BLink). & (p20024|myb1_maize : 207.0) Myb-related protein Zm1 - Zea mays (Maize) & (gnl|cdd|35271 : 182.0) no description available & (reliability: 430.0) & (original description: Putative Myb4, Description = P-type R2R3 Myb protein, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf07066_13654-16875' '(at4g38620 : 292.0) Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. MYB4 binds to its own promoter and represses its own expression. Nuclear localization of MYB4 depends on the action of the beta importin SAD2.; myb domain protein 4 (MYB4); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 32 (TAIR:AT4G34990.1); Has 9208 Blast hits to 8453 proteins in 515 species: Archae - 0; Bacteria - 0; Metazoa - 855; Fungi - 510; Plants - 6018; Viruses - 3; Other Eukaryotes - 1822 (source: NCBI BLink). & (p20026|myb1_horvu : 286.0) Myb-related protein Hv1 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 192.0) no description available & (reliability: 584.0) & (original description: Putative MYB308, Description = Myb-related protein 308, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf07231_815637-819250' '(at3g47600 : 288.0) Encodes a putative transcription factor (MYB94).; myb domain protein 94 (MYB94); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 96 (TAIR:AT5G62470.2); Has 8929 Blast hits to 8284 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 491; Plants - 5808; Viruses - 4; Other Eukaryotes - 1790 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 194.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 185.0) no description available & (reliability: 576.0) & (original description: Putative MYBJ3, Description = Transcription factor MYBJ3, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf07402_566431-571311' '(at1g66230 : 252.0) Encodes a putative transcription factor (MYB20).; myb domain protein 20 (MYB20); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 43 (TAIR:AT5G16600.1); Has 8410 Blast hits to 7811 proteins in 453 species: Archae - 0; Bacteria - 0; Metazoa - 663; Fungi - 296; Plants - 5767; Viruses - 4; Other Eukaryotes - 1680 (source: NCBI BLink). & (q50ex6|odo1_pethy : 239.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (gnl|cdd|35271 : 184.0) no description available & (reliability: 504.0) & (original description: Putative Myb2, Description = Myb-related transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf07424_216964-220123' '(at2g36960 : 124.0) Arabidopsis thaliana myb/SANT domain protein; TSL-kinase interacting protein 1 (TKI1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G39380.1). & (reliability: 248.0) & (original description: Putative TKI1, Description = TSL-kinase interacting 1-like protein, PFAM = )' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf07474_453022-456665' '(at1g17950 : 204.0) putative transcription factor: R2R3-MYB transcription family; myb domain protein 52 (MYB52); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 54 (TAIR:AT1G73410.1); Has 8890 Blast hits to 7951 proteins in 553 species: Archae - 0; Bacteria - 0; Metazoa - 901; Fungi - 603; Plants - 5404; Viruses - 5; Other Eukaryotes - 1977 (source: NCBI BLink). & (gnl|cdd|35271 : 144.0) no description available & (p20024|myb1_maize : 107.0) Myb-related protein Zm1 - Zea mays (Maize) & (gnl|cdd|34748 : 81.2) no description available & (reliability: 408.0) & (original description: Putative MYB105, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf07645_417444-421669' '(at3g04030 : 333.0) Homeodomain-like superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-related protein 1 (TAIR:AT5G18240.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 666.0) & (original description: Putative scMYB55, Description = ScMYB55 protein, PFAM = PF00249;PF14379)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf07656_71492-75290' '(at4g18770 : 229.0) MYB98 is a member of the R2R3-MYB gene family, the members of which likely encode transcription factors. Within an ovule, MYB98 is expressed exclusively in the synergid cells, and mutations in this gene affect the female gametophyte specifically. myb98 female gametophytes are affected in two unique features of the synergid cell, pollen tube guidance and the filiform apparatus, but are otherwise normal. This suggests that MYB98 controls the development of specific features within the synergid cell during female gametophyte development. MYB98 also is expressed in trichomes and endosperm. Homozygous myb98 mutants exhibit no sporophytic defects, including trichome and endosperm defects.; myb domain protein 98 (MYB98); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 118 (TAIR:AT3G27785.1); Has 10125 Blast hits to 8427 proteins in 562 species: Archae - 0; Bacteria - 3; Metazoa - 1026; Fungi - 830; Plants - 5955; Viruses - 3; Other Eukaryotes - 2308 (source: NCBI BLink). & (gnl|cdd|35271 : 144.0) no description available & (p93417|gam1_orysa : 102.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 85.8) no description available & (reliability: 458.0) & (original description: Putative MYB17, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf07744_127721-131578' '(at5g14340 : 228.0) Member of the R2R3 factor gene family.; myb domain protein 40 (MYB40); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 20 (TAIR:AT1G66230.1); Has 8800 Blast hits to 8097 proteins in 536 species: Archae - 0; Bacteria - 0; Metazoa - 861; Fungi - 444; Plants - 5790; Viruses - 6; Other Eukaryotes - 1699 (source: NCBI BLink). & (p80073|myb2_phypa : 210.0) Myb-related protein Pp2 - Physcomitrella patens (Moss) & (gnl|cdd|35271 : 173.0) no description available & (reliability: 456.0) & (original description: Putative MYB315, Description = Myb-related protein 315, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf07751_148626-157332' '(at1g09710 : 163.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G58220.1). & (reliability: 326.0) & (original description: Putative At1g09710, Description = Myb-like DNA-binding domain protein, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf07937_413569-420542' '(p93417|gam1_orysa : 284.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (at3g11440 : 243.0) Member of the R2R3-MYB gene family. Similar to GA-induced Barley myb gene. May be induced during germination in response to GA. Double mutants with MYB33 are male sterile, showing defects in pollen development and anther development. Contains a binding site for miRNA159 and may be spatially regulated by this micro RNA. The male sterile phenotype of the MYB33/MYB65 double mutant is light and temperature sensitive. Fertility can be restored with increased light intensity and lower temperatures.; myb domain protein 65 (MYB65); CONTAINS InterPro DOMAIN/s: Transcription factor, GAMYB (InterPro:IPR016310), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 33 (TAIR:AT5G06100.3); Has 8961 Blast hits to 8327 proteins in 478 species: Archae - 0; Bacteria - 0; Metazoa - 727; Fungi - 480; Plants - 5988; Viruses - 3; Other Eukaryotes - 1763 (source: NCBI BLink). & (gnl|cdd|35271 : 178.0) no description available & (reliability: 486.0) & (original description: Putative myb16, Description = MYB16, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf07984_190040-194778' '(at1g01150 : 84.7) Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: TRF-like 10 (TAIR:AT5G03780.1); Has 94 Blast hits to 77 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative At1g01150, Description = BnaA06g30300D protein, PFAM = )' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf08009_17254-20491' '(at4g21440 : 260.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p20025|myb38_maize : 210.0) Myb-related protein Zm38 - Zea mays (Maize) & (gnl|cdd|35271 : 194.0) no description available & (reliability: 520.0) & (original description: Putative myb1, Description = MYB1, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf08137_184544-198386' '(at1g18330 : 124.0) EARLY-PHYTOCHROME-RESPONSIVE1; EARLY-PHYTOCHROME-RESPONSIVE1 (EPR1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G10113.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative MYBR, Description = Transcription factor MYBR, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf08137_294939-299937' '(at1g17950 : 226.0) putative transcription factor: R2R3-MYB transcription family; myb domain protein 52 (MYB52); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 54 (TAIR:AT1G73410.1); Has 8890 Blast hits to 7951 proteins in 553 species: Archae - 0; Bacteria - 0; Metazoa - 901; Fungi - 603; Plants - 5404; Viruses - 5; Other Eukaryotes - 1977 (source: NCBI BLink). & (gnl|cdd|35271 : 143.0) no description available & (p20024|myb1_maize : 105.0) Myb-related protein Zm1 - Zea mays (Maize) & (gnl|cdd|34748 : 82.0) no description available & (reliability: 452.0) & (original description: Putative MYB3, Description = MYB transcription factor 3, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf08782_57125-61742' '(at5g49330 : 198.0) Member of the R2R3 factor gene family.; myb domain protein 111 (MYB111); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 12 (TAIR:AT2G47460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p27898|mybp_maize : 192.0) Myb-related protein P - Zea mays (Maize) & (gnl|cdd|35271 : 162.0) no description available & (reliability: 396.0) & (original description: Putative lbm1, Description = MYB family protein, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf09078_158975-166494' '(at2g47210 : 515.0) myb-like transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: N-terminal protein myristoylation, negative regulation of transcription, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), DNA methyltransferase 1-associated 1 (InterPro:IPR008468); Has 383 Blast hits to 375 proteins in 190 species: Archae - 0; Bacteria - 2; Metazoa - 140; Fungi - 145; Plants - 43; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|37867 : 320.0) no description available & (reliability: 1030.0) & (original description: Putative SWC4, Description = SWR1-complex protein 4, PFAM = PF16282;PF05499)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf09116_127484-131811' '(at4g28610 : 95.1) Similar to phosphate starvation response gene from Chlamydomonas. Weakly responsive to phosphate starvation. Acts upstream of PHO2 in phosphate signaling.; phosphate starvation response 1 (PHR1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G20400.1); Has 1692 Blast hits to 1675 proteins in 68 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 2; Plants - 1663; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative csp1, Description = Myb family transcription factor APL, PFAM = PF14379)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf09760_25126-77859' '(q7xbh4|myb4_orysa : 151.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 150.0) no description available & (at3g23250 : 149.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative myb, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf09773_185987-191367' '(at5g13820 : 384.0) Encodes a protein that specifically binds plant telomeric DNA repeats. It has a single Myb telomeric DNA-binding domain in C-terminus that prefers the sequence TTTAGGG.; telomeric DNA binding protein 1 (TBP1); FUNCTIONS IN: DNA binding, double-stranded telomeric DNA binding; INVOLVED IN: telomere maintenance; LOCATED IN: chromosome, telomeric region, nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Ubiquitin supergroup (InterPro:IPR019955), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 9 (TAIR:AT3G12560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 746.0) & (original description: Putative TRP4, Description = Telomere repeat-binding protein 4, PFAM = )' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf09832_50338-62092' '(at4g32730 : 647.0) Encodes a putative c-myb-like transcription factor with three MYB repeats.; PC-MYB1; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-4 (TAIR:AT5G11510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35271 : 162.0) no description available & (p93417|gam1_orysa : 109.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 97.4) no description available & (reliability: 1294.0) & (original description: Putative cmyb, Description = Myb-related protein 3R-1, PFAM = PF00249;PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf10124_353878-357030' '(at5g52600 : 187.0) Member of the R2R3 factor gene family.; myb domain protein 82 (MYB82); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 66 (TAIR:AT5G14750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35271 : 156.0) no description available & (p10290|mybc_maize : 154.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (reliability: 374.0) & (original description: Putative TSF, Description = Tuber-specific and sucrose-responsive element binding factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf10448_11479-14444' '(at5g45420 : 194.0) Duplicated homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: DnaJ domain ;Myb-like DNA-binding domain (TAIR:AT3G11450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative At5g45420, Description = AT5g45420/MFC19_9, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf11235_369233-372537' '(at2g45260 : 284.0) Plant protein of unknown function (DUF641); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF641) (TAIR:AT4G34080.1); Has 407 Blast hits to 396 proteins in 44 species: Archae - 0; Bacteria - 10; Metazoa - 42; Fungi - 9; Plants - 286; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|68434 : 86.2) no description available & (reliability: 528.0) & (original description: Putative BnaAnng27430D, Description = BnaAnng27430D protein, PFAM = PF04859)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf11569_24529-31293' '(p93417|gam1_orysa : 276.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (at3g11440 : 235.0) Member of the R2R3-MYB gene family. Similar to GA-induced Barley myb gene. May be induced during germination in response to GA. Double mutants with MYB33 are male sterile, showing defects in pollen development and anther development. Contains a binding site for miRNA159 and may be spatially regulated by this micro RNA. The male sterile phenotype of the MYB33/MYB65 double mutant is light and temperature sensitive. Fertility can be restored with increased light intensity and lower temperatures.; myb domain protein 65 (MYB65); CONTAINS InterPro DOMAIN/s: Transcription factor, GAMYB (InterPro:IPR016310), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 33 (TAIR:AT5G06100.3); Has 8961 Blast hits to 8327 proteins in 478 species: Archae - 0; Bacteria - 0; Metazoa - 727; Fungi - 480; Plants - 5988; Viruses - 3; Other Eukaryotes - 1763 (source: NCBI BLink). & (gnl|cdd|35271 : 178.0) no description available & (reliability: 470.0) & (original description: Putative myb, Description = MYB16, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf11790_186636-189686' '(at3g46130 : 199.0) Encodes a putative transcription factor (MYB48) that functions to regulate flavonol biosynthesis primarily in cotyledons.; myb domain protein 48 (MYB48); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), MYB-like (InterPro:IPR017877), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb domain protein 59 (TAIR:AT5G59780.2). & (q53nk6|myba1_orysa : 199.0) Myb-related protein MYBAS1 - Oryza sativa (Rice) & (gnl|cdd|35271 : 164.0) no description available & (reliability: 398.0) & (original description: Putative myb, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf12045_175011-182680' '(at3g55730 : 269.0) putative transcription factor MYB109 (MYB109) mRNA,; myb domain protein 109 (MYB109); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 25 (TAIR:AT2G39880.1); Has 8907 Blast hits to 7929 proteins in 513 species: Archae - 0; Bacteria - 2; Metazoa - 870; Fungi - 593; Plants - 5452; Viruses - 6; Other Eukaryotes - 1984 (source: NCBI BLink). & (gnl|cdd|35271 : 158.0) no description available & (q4jl76|myba2_orysa : 104.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (gnl|cdd|34748 : 95.8) no description available & (reliability: 538.0) & (original description: Putative myb7, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf12143_154844-158201' '(at3g47600 : 300.0) Encodes a putative transcription factor (MYB94).; myb domain protein 94 (MYB94); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 96 (TAIR:AT5G62470.2); Has 8929 Blast hits to 8284 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 491; Plants - 5808; Viruses - 4; Other Eukaryotes - 1790 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 192.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 185.0) no description available & (gnl|cdd|34748 : 81.2) no description available & (reliability: 600.0) & (original description: Putative MYB306, Description = Myb-related protein 306, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf12214_33355-36788' '(q4jl76|myba2_orysa : 199.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (at3g46130 : 197.0) Encodes a putative transcription factor (MYB48) that functions to regulate flavonol biosynthesis primarily in cotyledons.; myb domain protein 48 (MYB48); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), MYB-like (InterPro:IPR017877), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb domain protein 59 (TAIR:AT5G59780.2). & (gnl|cdd|35271 : 161.0) no description available & (reliability: 394.0) & (original description: Putative MYB59, Description = Transcription factor MYB59, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf12280_108746-123359' '(at5g06800 : 110.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G01060.1). & (reliability: 200.0) & (original description: Putative PHL1, Description = BnaA03g55680D protein, PFAM = PF14379)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf12321_49494-56226' '(at2g02060 : 92.4) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G14600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative MYBR14, Description = Putative Myb family transcription factor, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf12852_228685-232245' '(at1g09540 : 262.0) Encodes putative transcription factor. Mutants lack of mucilage extrusion from the seeds during imbibition. Reduced quantities of mucilage are deposited during the development of the seed coat epidermis in myb61 mutants. Expressed in guard cells,loss of function mutations show an increase in stomatal pore opening suggesting a role in ABA independent regulation of stomatal pore size.; myb domain protein 61 (MYB61); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 50 (TAIR:AT1G57560.1); Has 8976 Blast hits to 8269 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 766; Fungi - 514; Plants - 5880; Viruses - 4; Other Eukaryotes - 1812 (source: NCBI BLink). & (p20027|myb3_horvu : 214.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 184.0) no description available & (reliability: 524.0) & (original description: Putative MYB4, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf13162_122488-125639' '(at1g68320 : 224.0) putative transcription factor: R2R3-MYB transcription family. Involved in regulation of phosphate starvation responses and gibberellic acid biosynthesis.; myb domain protein 62 (MYB62); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 116 (TAIR:AT1G25340.1); Has 8752 Blast hits to 8056 proteins in 466 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 492; Plants - 5746; Viruses - 3; Other Eukaryotes - 1772 (source: NCBI BLink). & (gnl|cdd|35271 : 157.0) no description available & (q4jl76|myba2_orysa : 150.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 448.0) & (original description: Putative MYB16, Description = R2R3-MYB protein, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf13186_335435-341297' '(at3g27810 : 227.0) Encodes a member of the R2R3-MYB transcription factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development.; myb domain protein 21 (MYB21); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 24 (TAIR:AT5G40350.1); Has 8792 Blast hits to 8049 proteins in 467 species: Archae - 0; Bacteria - 0; Metazoa - 785; Fungi - 472; Plants - 5782; Viruses - 6; Other Eukaryotes - 1747 (source: NCBI BLink). & (gnl|cdd|35271 : 164.0) no description available & (q4jl76|myba2_orysa : 151.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 454.0) & (original description: Putative MYB340, Description = Myb-related protein 340, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf13710_447949-451181' '(at2g37630 : 234.0) Encodes a MYB-domain protein involved in specification of the leaf proximodistal axis. Mutation results in lobed and dissected leaves with a characteristic asymmetry. Homologous to the Antirrhinum PHANTASTICA (PHAN) and maize ROUGH SHEATH2 (RS2) genes Asymmetric placement of auxin response at the distal leaf tip precedes visible asymmetric leaf growth. Acts alongside AXR1 to exclude BP expression in leaves and with PIN1 to repress BP and promote lateral organ growth. Interacts physically with AS2 to form a complex that binds to the BP promoter and silences BP. Also functions as a regulator of the plant immune response.; ASYMMETRIC LEAVES 1 (AS1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 113 (TAIR:AT1G66370.1); Has 8693 Blast hits to 7877 proteins in 569 species: Archae - 0; Bacteria - 8; Metazoa - 942; Fungi - 511; Plants - 5476; Viruses - 6; Other Eukaryotes - 1750 (source: NCBI BLink). & (gnl|cdd|35271 : 125.0) no description available & (p93417|gam1_orysa : 95.5) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (reliability: 468.0) & (original description: Putative ARP1, Description = PHANTASTICA-like protein, PFAM = PF13921)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf14562_97109-105463' '(at5g02320 : 367.0) Encodes a putative c-MYB-like transcription factor of the MYB3R factor gene family (MYB3R5).; myb domain protein 3r-5 (MYB3R-5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-3 (TAIR:AT3G09370.1). & (gnl|cdd|35271 : 159.0) no description available & (p93417|gam1_orysa : 110.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (gnl|cdd|34748 : 97.8) no description available & (reliability: 734.0) & (original description: Putative cmyb, Description = Myb-related protein 3R-1, PFAM = PF00249;PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf15244_69384-79911' '(at3g52250 : 477.0) Encodes a protein with a putative role in mRNA splicing.; Duplicated homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: RNA splicing; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SANT, eukarya (InterPro:IPR017884); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37089 : 112.0) no description available & (reliability: 954.0) & (original description: Putative glysoja_048974, Description = Nuclear receptor corepressor 2, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf15536_88498-92214' '(at3g13540 : 200.0) Encodes a member of the MYB family of transcriptional regulators. MYB5 act as a negative regulator of trichome branching and play a role in the correct formation of the seed coat and possibly the formation the underlying endosperm layers. Loss of function mutations have defects in seed coat mucilage and columella cells as well as trichome defects (smaller and reduced number of branches).; myb domain protein 5 (MYB5); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 17 (TAIR:AT3G61250.1); Has 8972 Blast hits to 8275 proteins in 512 species: Archae - 0; Bacteria - 0; Metazoa - 834; Fungi - 461; Plants - 5987; Viruses - 3; Other Eukaryotes - 1687 (source: NCBI BLink). & (p20026|myb1_horvu : 196.0) Myb-related protein Hv1 - Hordeum vulgare (Barley) & (gnl|cdd|35271 : 174.0) no description available & (reliability: 400.0) & (original description: Putative myb, Description = Transcription factor MYB 12, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf15568_125286-138256' '(at3g61250 : 344.0) Member of the R2R3 factor gene family.; myb domain protein 17 (MYB17); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 16 (TAIR:AT5G15310.1); Has 8810 Blast hits to 8210 proteins in 476 species: Archae - 0; Bacteria - 0; Metazoa - 695; Fungi - 480; Plants - 5869; Viruses - 3; Other Eukaryotes - 1763 (source: NCBI BLink). & (q50ex6|odo1_pethy : 206.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (gnl|cdd|35271 : 188.0) no description available & (reliability: 688.0) & (original description: Putative myb9, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf15721_103296-107303' '(q50ex6|odo1_pethy : 421.0) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (at4g12350 : 259.0) Encodes a putative transcription factor (MYB42).; myb domain protein 42 (MYB42); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 85 (TAIR:AT4G22680.1); Has 8783 Blast hits to 8115 proteins in 472 species: Archae - 0; Bacteria - 0; Metazoa - 778; Fungi - 398; Plants - 5939; Viruses - 6; Other Eukaryotes - 1662 (source: NCBI BLink). & (gnl|cdd|35271 : 196.0) no description available & (reliability: 518.0) & (original description: Putative ODO1, Description = Protein ODORANT1, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf15817_300012-303380' '(at3g49690 : 223.0) "Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB84, regulates axillary meristem formation. "; myb domain protein 84 (MYB84); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 68 (TAIR:AT5G65790.1); Has 8670 Blast hits to 8092 proteins in 466 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 404; Plants - 5917; Viruses - 3; Other Eukaryotes - 1656 (source: NCBI BLink). & (gnl|cdd|35271 : 169.0) no description available & (p20025|myb38_maize : 163.0) Myb-related protein Zm38 - Zea mays (Maize) & (reliability: 446.0) & (original description: Putative MYB1, Description = R2R3-MYB transcription factor MYB1.2, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf16258_57816-63801' '(at2g40260 : 103.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G38300.1); Has 1902 Blast hits to 1885 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 17; Plants - 1623; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative AT2G02060, Description = Putative Myb family transcription factor, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf16378_132967-138587' '(at3g27810 : 234.0) Encodes a member of the R2R3-MYB transcription factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development.; myb domain protein 21 (MYB21); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 24 (TAIR:AT5G40350.1); Has 8792 Blast hits to 8049 proteins in 467 species: Archae - 0; Bacteria - 0; Metazoa - 785; Fungi - 472; Plants - 5782; Viruses - 6; Other Eukaryotes - 1747 (source: NCBI BLink). & (gnl|cdd|35271 : 166.0) no description available & (q4jl76|myba2_orysa : 150.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 468.0) & (original description: Putative MYB305, Description = Myb-related protein 305, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf17127_27610-31533' '(at5g52260 : 189.0) Member of the R2R3 factor gene family.; myb domain protein 19 (MYB19); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 18 (TAIR:AT4G25560.1); Has 8937 Blast hits to 8289 proteins in 544 species: Archae - 0; Bacteria - 0; Metazoa - 775; Fungi - 488; Plants - 5833; Viruses - 3; Other Eukaryotes - 1838 (source: NCBI BLink). & (gnl|cdd|35271 : 170.0) no description available & (p20027|myb3_horvu : 159.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (reliability: 378.0) & (original description: Putative MYB58, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf18896_94442-97685' '(at5g49620 : 236.0) Member of the R2R3 factor gene family.; myb domain protein 78 (MYB78); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 108 (TAIR:AT3G06490.1). & (gnl|cdd|35271 : 167.0) no description available & (q4jl76|myba2_orysa : 136.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 472.0) & (original description: Putative MYB108, Description = Transcription factor MYB108, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf18955_72163-76409' '(at3g04030 : 315.0) Homeodomain-like superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-related protein 1 (TAIR:AT5G18240.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 630.0) & (original description: Putative MYR2, Description = Myb-related protein 2, PFAM = PF14379;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf19180_12534-16251' '(at5g57620 : 228.0) Encodes a putative transcription factor (MYB36).; myb domain protein 36 (MYB36); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 68 (TAIR:AT5G65790.1); Has 9119 Blast hits to 8411 proteins in 472 species: Archae - 0; Bacteria - 0; Metazoa - 823; Fungi - 478; Plants - 5914; Viruses - 3; Other Eukaryotes - 1901 (source: NCBI BLink). & (gnl|cdd|35271 : 177.0) no description available & (q7xbh4|myb4_orysa : 169.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 456.0) & (original description: Putative myb, Description = MYB7, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf24096_25540-30061' '(at1g25360 : 998.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 48992 Blast hits to 14461 proteins in 282 species: Archae - 2; Bacteria - 7; Metazoa - 148; Fungi - 100; Plants - 48130; Viruses - 0; Other Eukaryotes - 605 (source: NCBI BLink). & (q76c99|rf1_orysa : 99.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1996.0) & (original description: Putative PCMP-H74, Description = Pentatricopeptide repeat-containing protein At1g25360, PFAM = PF14432;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf25043_11097-14179' '(at2g37630 : 343.0) Encodes a MYB-domain protein involved in specification of the leaf proximodistal axis. Mutation results in lobed and dissected leaves with a characteristic asymmetry. Homologous to the Antirrhinum PHANTASTICA (PHAN) and maize ROUGH SHEATH2 (RS2) genes Asymmetric placement of auxin response at the distal leaf tip precedes visible asymmetric leaf growth. Acts alongside AXR1 to exclude BP expression in leaves and with PIN1 to repress BP and promote lateral organ growth. Interacts physically with AS2 to form a complex that binds to the BP promoter and silences BP. Also functions as a regulator of the plant immune response.; ASYMMETRIC LEAVES 1 (AS1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 113 (TAIR:AT1G66370.1); Has 8693 Blast hits to 7877 proteins in 569 species: Archae - 0; Bacteria - 8; Metazoa - 942; Fungi - 511; Plants - 5476; Viruses - 6; Other Eukaryotes - 1750 (source: NCBI BLink). & (gnl|cdd|35271 : 125.0) no description available & (p93417|gam1_orysa : 102.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (reliability: 686.0) & (original description: Putative phan, Description = MYB-related transcription factor, PFAM = PF13921)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf29357_58728-61858' '(at3g24310 : 249.0) snapdragon myb protein 305 homolog (myb); myb domain protein 305 (MYB305); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 79 (TAIR:AT4G13480.1); Has 8987 Blast hits to 8204 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 778; Fungi - 510; Plants - 5849; Viruses - 4; Other Eukaryotes - 1846 (source: NCBI BLink). & (gnl|cdd|35271 : 172.0) no description available & (q4jl76|myba2_orysa : 168.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 498.0) & (original description: Putative myb, Description = Snapdragon myb protein 305 homolog, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf31568_21699-28157' '(at2g02060 : 117.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G14600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative MYBR14, Description = MYBR domain class transcription factor, PFAM = PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf34895_33028-36169' '(at3g23250 : 174.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35271 : 172.0) no description available & (q7xbh4|myb4_orysa : 171.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 348.0) & (original description: Putative MYB72, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'niben101scf35850_17152-21968' '(at1g63910 : 238.0) member of MYB3R- and R2R3- type MYB- encoding genes; myb domain protein 103 (AtMYB103); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 26 (TAIR:AT3G13890.2); Has 8923 Blast hits to 8250 proteins in 474 species: Archae - 0; Bacteria - 0; Metazoa - 755; Fungi - 504; Plants - 5899; Viruses - 6; Other Eukaryotes - 1759 (source: NCBI BLink). & (gnl|cdd|35271 : 175.0) no description available & (p20027|myb3_horvu : 172.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (reliability: 476.0) & (original description: Putative THM1, Description = Transcription factor, PFAM = PF00249;PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.3scaffold6781_2573-5612' '(at5g05790 : 235.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT3G11280.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35943 : 123.0) no description available & (reliability: 470.0) & (original description: Putative DIV2B, Description = DIV2B protein, PFAM = PF00249;PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.3scaffold11745_8078-11629' '(at4g39250 : 101.0) RAD-like 1 (RL1); CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G21650.1); Has 592 Blast hits to 591 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 0; Plants - 470; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative fsm1, Description = SANT/MYB domain protein, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.3scaffold19798_29343-32705' '(at1g75250 : 110.0) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative RL6, Description = Protein RADIALIS-like 6, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.3scaffold23724_8219-18227' '(at5g52660 : 230.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G01280.1); Has 1360 Blast hits to 1350 proteins in 120 species: Archae - 0; Bacteria - 4; Metazoa - 93; Fungi - 8; Plants - 1059; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink). & (gnl|cdd|35943 : 107.0) no description available & (reliability: 460.0) & (original description: Putative RVE6, Description = Protein REVEILLE 6, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.3scaffold24283_576-5417' '(at5g17300 : 158.0) Myb-like transcription factor that regulates hypocotyl growth by regulating free auxin levels in a time-of-day specific manner.; REVEILLE 1 (RVE1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G37260.1); Has 1557 Blast hits to 1521 proteins in 166 species: Archae - 0; Bacteria - 3; Metazoa - 201; Fungi - 29; Plants - 1060; Viruses - 9; Other Eukaryotes - 255 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative MYB177, Description = MYB transcription factor MYB177, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.3scaffold26514_12052-15588' '(at1g49010 : 112.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G08520.1); Has 2158 Blast hits to 2138 proteins in 225 species: Archae - 0; Bacteria - 22; Metazoa - 311; Fungi - 95; Plants - 1498; Viruses - 2; Other Eukaryotes - 230 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative MYB8, Description = BnaA06g03350D protein, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.3scaffold34910_16199-21491' '(at5g56840 : 152.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1); Has 1025 Blast hits to 1022 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 894; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative myb, Description = Myb-like transcription factor family protein, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.3scaffold36964_3425-7452' '(at5g56840 : 161.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1); Has 1025 Blast hits to 1022 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 894; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative MYB127, Description = MYB transcription factor MYB127, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.3scaffold42866_21245-29067' '(at1g49950 : 157.0) Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.; telomere repeat binding factor 1 (TRB1); FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative MYB34, Description = Single MYB histone protein, PFAM = PF00538;PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.3scaffold47389_5315-16180' '(at1g13450 : 436.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G25990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39483 : 107.0) no description available & (reliability: 872.0) & (original description: Putative GT-1, Description = Trihelix transcription factor GT-1, PFAM = PF13837)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.3scaffold48038_1970-5425' '(at5g58900 : 282.0) Homeodomain-like transcriptional regulator; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT2G38090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35943 : 125.0) no description available & (reliability: 564.0) & (original description: Putative myb8, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.3scaffold62403_2422-6972' '(at5g61620 : 152.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative myb, Description = Myb-like transcription factor family protein, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.3scaffold74140_1823-6054' '(at5g56840 : 164.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1); Has 1025 Blast hits to 1022 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 894; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative MYB127, Description = MYB transcription factor MYB127, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.5scaffold65_985500-997098' '(at1g13450 : 437.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G25990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39483 : 106.0) no description available & (reliability: 874.0) & (original description: Putative GT-1, Description = Trihelix transcription factor GT-1, PFAM = PF13837)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.5scaffold127_827429-831655' '(at1g49950 : 255.0) Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.; telomere repeat binding factor 1 (TRB1); FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 510.0) & (original description: Putative TRB1, Description = Telomere repeat-binding factor 1, PFAM = PF00249;PF00538)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.5scaffold751_152973-458425' '(at2g38090 : 239.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G58900.1); Has 1891 Blast hits to 1883 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 227; Fungi - 3; Plants - 1444; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|35943 : 103.0) no description available & (reliability: 478.0) & (original description: Putative DIV, Description = DIVARICATA, PFAM = PF00249;PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.5scaffold751_454914-458500' '(at2g38090 : 239.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G58900.1); Has 1891 Blast hits to 1883 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 227; Fungi - 3; Plants - 1444; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|35943 : 115.0) no description available & (reliability: 478.0) & (original description: Putative SEM1, Description = Somatic embryogenesis MYB 1 transcription factor, PFAM = PF00249;PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.5scaffold1322_136155-230372' '(at1g49010 : 242.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G08520.1); Has 2158 Blast hits to 2138 proteins in 225 species: Archae - 0; Bacteria - 22; Metazoa - 311; Fungi - 95; Plants - 1498; Viruses - 2; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|35943 : 121.0) no description available & (reliability: 484.0) & (original description: Putative myb3, Description = Putative MYB transcription factor, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.5scaffold1471_657675-672190' '(at5g08520 : 275.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G23650.1); Has 2184 Blast hits to 2148 proteins in 187 species: Archae - 0; Bacteria - 10; Metazoa - 113; Fungi - 60; Plants - 1413; Viruses - 0; Other Eukaryotes - 588 (source: NCBI BLink). & (gnl|cdd|35943 : 128.0) no description available & (reliability: 550.0) & (original description: Putative myb8, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.5scaffold1993_62113-64978' '(at1g75250 : 93.6) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative RL1, Description = Protein RADIALIS-like 1, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.5scaffold2196_221862-229355' '(at1g49950 : 186.0) Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.; telomere repeat binding factor 1 (TRB1); FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative MYB33, Description = Single MYB histone protein, PFAM = PF00249;PF00538)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'nbv0.5scaffold2646_205295-237769' '(at1g09770 : 947.0) Member of MYB3R- and R2R3- type MYB- encoding genes. Essential for plant innate immunity. Interacts with MOS4 and PRL1.; cell division cycle 5 (CDC5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response signaling pathway, resistance gene-independent, defense response signaling pathway, resistance gene-dependent, defense response to bacterium, defense response to fungus, regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3351 (InterPro:IPR021786), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-4 (TAIR:AT5G11510.1); Has 13137 Blast hits to 10813 proteins in 768 species: Archae - 14; Bacteria - 356; Metazoa - 3570; Fungi - 914; Plants - 4936; Viruses - 8; Other Eukaryotes - 3339 (source: NCBI BLink). & (gnl|cdd|35273 : 504.0) no description available & (gnl|cdd|34748 : 163.0) no description available & (reliability: 1894.0) & (original description: Putative CDC5, Description = Cell division cycle 5-like protein, PFAM = PF13921;PF11831)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00000867ctg042_18969-44473' '(at1g09770 : 833.0) Member of MYB3R- and R2R3- type MYB- encoding genes. Essential for plant innate immunity. Interacts with MOS4 and PRL1.; cell division cycle 5 (CDC5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response signaling pathway, resistance gene-independent, defense response signaling pathway, resistance gene-dependent, defense response to bacterium, defense response to fungus, regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3351 (InterPro:IPR021786), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-4 (TAIR:AT5G11510.1); Has 13137 Blast hits to 10813 proteins in 768 species: Archae - 14; Bacteria - 356; Metazoa - 3570; Fungi - 914; Plants - 4936; Viruses - 8; Other Eukaryotes - 3339 (source: NCBI BLink). & (gnl|cdd|35273 : 408.0) no description available & (gnl|cdd|34748 : 96.6) no description available & (reliability: 1666.0) & (original description: Putative CDC5, Description = Cell division cycle 5-like protein, PFAM = PF11831;PF13921)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00000867ctg042_37741-41635' '(at1g09770 : 177.0) Member of MYB3R- and R2R3- type MYB- encoding genes. Essential for plant innate immunity. Interacts with MOS4 and PRL1.; cell division cycle 5 (CDC5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response signaling pathway, resistance gene-independent, defense response signaling pathway, resistance gene-dependent, defense response to bacterium, defense response to fungus, regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3351 (InterPro:IPR021786), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-4 (TAIR:AT5G11510.1); Has 13137 Blast hits to 10813 proteins in 768 species: Archae - 14; Bacteria - 356; Metazoa - 3570; Fungi - 914; Plants - 4936; Viruses - 8; Other Eukaryotes - 3339 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative myb26, Description = Cell division cycle 5-like protein, PFAM = )' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00002795ctg016_17019-20113' '(at5g47390 : 144.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G16350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative myb5, Description = Putative MYB transcription factor, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00002828ctg002_348-2346' '(at3g11280 : 236.0) Putative transcription factors interacting with the gene product of VHA-B1 (vacuolar ATPase subunit B1; as shown through yeast two-hybrid assay).; Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G05790.1); Has 1712 Blast hits to 1708 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 4; Plants - 1403; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (gnl|cdd|35943 : 98.1) no description available & (reliability: 472.0) & (original description: Putative myb, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00002989ctg005_25662-30057' '(at1g49950 : 227.0) Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.; telomere repeat binding factor 1 (TRB1); FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative TRB2, Description = Telomere repeat-binding factor 2, PFAM = PF00249;PF00538)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00009170ctg000_5134-9264' '(at5g47390 : 157.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G16350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative MYB17, Description = Putative MYB-related protein 17, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00012515ctg015_2391-10306' '(at1g49950 : 167.0) Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.; telomere repeat binding factor 1 (TRB1); FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative MYB34, Description = Single MYB histone protein, PFAM = PF00249;PF00538)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00013740ctg008_11466-14030' '(at5g53200 : 98.2) TRIPTYCHON (TRY); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G30420.1); Has 2274 Blast hits to 2274 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 2256; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative TCL2, Description = MYB-like transcription factor TCL2, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00016291ctg003_2061-5699' '(at5g56840 : 134.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1); Has 1025 Blast hits to 1022 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 894; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative myb, Description = Myb-like transcription factor family protein, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00024985ctg005_2489-6490' '(at5g17300 : 157.0) Myb-like transcription factor that regulates hypocotyl growth by regulating free auxin levels in a time-of-day specific manner.; REVEILLE 1 (RVE1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G37260.1); Has 1557 Blast hits to 1521 proteins in 166 species: Archae - 0; Bacteria - 3; Metazoa - 201; Fungi - 29; Plants - 1060; Viruses - 9; Other Eukaryotes - 255 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative MYB177, Description = MYB transcription factor MYB177, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00025259ctg001_4468-7976' '(at2g38090 : 238.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G58900.1); Has 1891 Blast hits to 1883 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 227; Fungi - 3; Plants - 1444; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|35943 : 111.0) no description available & (reliability: 476.0) & (original description: Putative SEM1, Description = Somatic embryogenesis MYB 1 transcription factor, PFAM = PF00249;PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00025259ctg001_4474-7982' '(at2g38090 : 238.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G58900.1); Has 1891 Blast hits to 1883 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 227; Fungi - 3; Plants - 1444; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|35943 : 111.0) no description available & (reliability: 476.0) & (original description: Putative SEM1, Description = Somatic embryogenesis MYB 1 transcription factor, PFAM = PF00249;PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00044962ctg014_11232-15432' '(at1g49950 : 132.0) Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.; telomere repeat binding factor 1 (TRB1); FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative scMYB54, Description = ScMYB54 protein, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00048908ctg001_14846-18690' '(at5g04760 : 202.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G08520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35943 : 104.0) no description available & (reliability: 404.0) & (original description: Putative myb, Description = MYB5, PFAM = PF00249;PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00053840ctg000_36016-41480' '(at5g08520 : 169.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G23650.1); Has 2184 Blast hits to 2148 proteins in 187 species: Archae - 0; Bacteria - 10; Metazoa - 113; Fungi - 60; Plants - 1413; Viruses - 0; Other Eukaryotes - 588 (source: NCBI BLink). & (gnl|cdd|35943 : 111.0) no description available & (reliability: 338.0) & (original description: Putative myb, Description = MYB transcription factor, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00057668ctg001_280-13144' '(at5g08520 : 289.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G23650.1); Has 2184 Blast hits to 2148 proteins in 187 species: Archae - 0; Bacteria - 10; Metazoa - 113; Fungi - 60; Plants - 1413; Viruses - 0; Other Eukaryotes - 588 (source: NCBI BLink). & (gnl|cdd|35943 : 129.0) no description available & (reliability: 578.0) & (original description: Putative myb8, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben044scf00059830ctg000_682-4576' '(at5g17300 : 159.0) Myb-like transcription factor that regulates hypocotyl growth by regulating free auxin levels in a time-of-day specific manner.; REVEILLE 1 (RVE1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G37260.1); Has 1557 Blast hits to 1521 proteins in 166 species: Archae - 0; Bacteria - 3; Metazoa - 201; Fungi - 29; Plants - 1060; Viruses - 9; Other Eukaryotes - 255 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative LHY, Description = Putative uncharacterized protein LHY, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf00024_16315-19730' '(at1g74840 : 162.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 9 processes; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G19000.2). & (reliability: 324.0) & (original description: Putative myb, Description = Myb-like protein J, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf00108_238119-242318' '(at5g56840 : 161.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1); Has 1025 Blast hits to 1022 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 894; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative MYB127, Description = MYB transcription factor MYB127, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf00226_124655-127828' '(at1g75250 : 106.0) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative RL5, Description = Protein RADIALIS-like 5, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf00304_250208-265615' '(at5g08520 : 174.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G23650.1); Has 2184 Blast hits to 2148 proteins in 187 species: Archae - 0; Bacteria - 10; Metazoa - 113; Fungi - 60; Plants - 1413; Viruses - 0; Other Eukaryotes - 588 (source: NCBI BLink). & (gnl|cdd|35943 : 112.0) no description available & (reliability: 348.0) & (original description: Putative myb, Description = MYB transcription factor, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf00350_405175-409032' '(at1g75250 : 110.0) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative RL6, Description = Protein RADIALIS-like 6, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf00539_90906-125734' '(at1g09770 : 946.0) Member of MYB3R- and R2R3- type MYB- encoding genes. Essential for plant innate immunity. Interacts with MOS4 and PRL1.; cell division cycle 5 (CDC5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response signaling pathway, resistance gene-independent, defense response signaling pathway, resistance gene-dependent, defense response to bacterium, defense response to fungus, regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3351 (InterPro:IPR021786), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-4 (TAIR:AT5G11510.1); Has 13137 Blast hits to 10813 proteins in 768 species: Archae - 14; Bacteria - 356; Metazoa - 3570; Fungi - 914; Plants - 4936; Viruses - 8; Other Eukaryotes - 3339 (source: NCBI BLink). & (gnl|cdd|35273 : 500.0) no description available & (gnl|cdd|34748 : 163.0) no description available & (reliability: 1892.0) & (original description: Putative CDC5, Description = Cell division cycle 5-like protein, PFAM = PF11831;PF13921)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf00725_380286-383790' '(at1g49010 : 212.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G08520.1); Has 2158 Blast hits to 2138 proteins in 225 species: Archae - 0; Bacteria - 22; Metazoa - 311; Fungi - 95; Plants - 1498; Viruses - 2; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|35943 : 127.0) no description available & (reliability: 424.0) & (original description: Putative myb3, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf00853_6283-14697' '(at1g49950 : 182.0) Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.; telomere repeat binding factor 1 (TRB1); FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative MYB33, Description = Single MYB histone protein, PFAM = PF00249;PF00538)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf00887_274362-279445' '(at1g18330 : 129.0) EARLY-PHYTOCHROME-RESPONSIVE1; EARLY-PHYTOCHROME-RESPONSIVE1 (EPR1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G10113.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative MYBR, Description = Transcription factor MYBR, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf01076_449638-452583' '(at5g53200 : 97.4) TRIPTYCHON (TRY); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G30420.1); Has 2274 Blast hits to 2274 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 2256; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 194.8) & (original description: Putative CPC, Description = Transcription factor CPC, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf01110_14398-18207' '(at1g75250 : 90.1) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative fsm1, Description = Homeodomain-like protein, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf01478_704386-724384' '(at5g08520 : 285.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G23650.1); Has 2184 Blast hits to 2148 proteins in 187 species: Archae - 0; Bacteria - 10; Metazoa - 113; Fungi - 60; Plants - 1413; Viruses - 0; Other Eukaryotes - 588 (source: NCBI BLink). & (gnl|cdd|35943 : 129.0) no description available & (reliability: 570.0) & (original description: Putative myb8, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf01500_612676-617057' '(at5g47390 : 341.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G16350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 682.0) & (original description: Putative myb4, Description = Myb transcription factor, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf01512_166685-171977' '(at5g56840 : 150.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1); Has 1025 Blast hits to 1022 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 894; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative MYB127, Description = MYB transcription factor MYB127, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf01738_735443-738914' '(at2g38090 : 306.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G58900.1); Has 1891 Blast hits to 1883 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 227; Fungi - 3; Plants - 1444; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|35943 : 131.0) no description available & (reliability: 612.0) & (original description: Putative myb8, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf01834_523937-527774' '(at5g04760 : 196.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G08520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35943 : 92.3) no description available & (reliability: 392.0) & (original description: Putative MYB, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf01859_36554-40307' '(at1g75250 : 104.0) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative RL6, Description = Protein RADIALIS-like 6, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf02026_80767-104361' '(at1g01060 : 157.0) LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1; LATE ELONGATED HYPOCOTYL (LHY); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 11 processes; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: circadian clock associated 1 (TAIR:AT2G46830.1). & (reliability: 314.0) & (original description: Putative lhy, Description = LHY protein, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf02250_22338-25793' '(at5g58900 : 274.0) Homeodomain-like transcriptional regulator; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT2G38090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35943 : 116.0) no description available & (reliability: 548.0) & (original description: Putative myb8, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf02433_700742-705719' '(at5g17300 : 160.0) Myb-like transcription factor that regulates hypocotyl growth by regulating free auxin levels in a time-of-day specific manner.; REVEILLE 1 (RVE1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G37260.1); Has 1557 Blast hits to 1521 proteins in 166 species: Archae - 0; Bacteria - 3; Metazoa - 201; Fungi - 29; Plants - 1060; Viruses - 9; Other Eukaryotes - 255 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative RVE1, Description = Protein REVEILLE 1, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf02786_27147-30701' '(at1g49010 : 217.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G08520.1); Has 2158 Blast hits to 2138 proteins in 225 species: Archae - 0; Bacteria - 22; Metazoa - 311; Fungi - 95; Plants - 1498; Viruses - 2; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|35943 : 128.0) no description available & (reliability: 434.0) & (original description: Putative myb3, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf02812_118759-122325' '(at1g49010 : 123.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G08520.1); Has 2158 Blast hits to 2138 proteins in 225 species: Archae - 0; Bacteria - 22; Metazoa - 311; Fungi - 95; Plants - 1498; Viruses - 2; Other Eukaryotes - 230 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative BnaAnng01040D, Description = BnaAnng01040D protein, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf02831_270526-279565' '(at1g17520 : 181.0) Homeodomain-like/winged-helix DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like/winged-helix DNA-binding family protein (TAIR:AT1G72740.1); Has 882 Blast hits to 875 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 109; Fungi - 89; Plants - 618; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative myb5, Description = Histone H1, PFAM = PF00249;PF00538)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf02940_85189-89116' '(at1g19000 : 168.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G74840.1); Has 1188 Blast hits to 1183 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1018; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative myb, Description = Myb-like protein J, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf03435_161432-178312' '(at1g09770 : 946.0) Member of MYB3R- and R2R3- type MYB- encoding genes. Essential for plant innate immunity. Interacts with MOS4 and PRL1.; cell division cycle 5 (CDC5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response signaling pathway, resistance gene-independent, defense response signaling pathway, resistance gene-dependent, defense response to bacterium, defense response to fungus, regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3351 (InterPro:IPR021786), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-4 (TAIR:AT5G11510.1); Has 13137 Blast hits to 10813 proteins in 768 species: Archae - 14; Bacteria - 356; Metazoa - 3570; Fungi - 914; Plants - 4936; Viruses - 8; Other Eukaryotes - 3339 (source: NCBI BLink). & (gnl|cdd|35273 : 502.0) no description available & (gnl|cdd|34748 : 165.0) no description available & (reliability: 1892.0) & (original description: Putative CDC5, Description = Cell division cycle 5-like protein, PFAM = PF13921;PF11831)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf03500_247612-250708' '(at5g05790 : 236.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT3G11280.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35943 : 118.0) no description available & (reliability: 472.0) & (original description: Putative SEM1, Description = Somatic embryogenesis MYB 1 transcription factor, PFAM = PF00249;PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf03660_121761-123997' '(at1g75250 : 97.8) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative RAD, Description = RADIALIS, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf03690_99150-102102' '(at1g75250 : 93.2) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative fsm1, Description = RADIALIS, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf03779_657106-659935' '(at3g11280 : 236.0) Putative transcription factors interacting with the gene product of VHA-B1 (vacuolar ATPase subunit B1; as shown through yeast two-hybrid assay).; Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G05790.1); Has 1712 Blast hits to 1708 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 4; Plants - 1403; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (gnl|cdd|35943 : 105.0) no description available & (reliability: 472.0) & (original description: Putative myb, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf03860_365329-368752' '(at2g38090 : 293.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G58900.1); Has 1891 Blast hits to 1883 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 227; Fungi - 3; Plants - 1444; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|35943 : 132.0) no description available & (reliability: 586.0) & (original description: Putative DIV3B, Description = DIV3B protein, PFAM = PF00249;PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf03993_638038-641647' '(at5g04760 : 206.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G08520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35943 : 104.0) no description available & (reliability: 412.0) & (original description: Putative myb, Description = MYB5, PFAM = PF00249;PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf04113_1760126-1763133' '(at1g75250 : 110.0) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative RL6, Description = Protein RADIALIS-like 6, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf04629_328632-332207' '(at4g39250 : 102.0) RAD-like 1 (RL1); CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G21650.1); Has 592 Blast hits to 591 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 0; Plants - 470; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative RAD2, Description = RADIALIS, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf04655_466040-469326' '(at1g75250 : 98.6) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 197.2) & (original description: Putative fsm1, Description = RADIALIS, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf04657_227631-235050' '(at1g49950 : 227.0) Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.; telomere repeat binding factor 1 (TRB1); FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative TRB1, Description = Telomere repeat-binding factor 1, PFAM = PF00249;PF00538)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf04784_13912-16172' '(at1g75250 : 103.0) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative RAD, Description = Transcription factor RADIALIS, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf04889_156609-160247' '(at5g56840 : 131.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1); Has 1025 Blast hits to 1022 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 894; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative myb, Description = Myb-like transcription factor family protein, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf04905_708710-721258' '(at1g13450 : 437.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G25990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39483 : 108.0) no description available & (reliability: 874.0) & (original description: Putative GT-4, Description = Trihelix transcription factor GT-4, PFAM = PF13837)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf05082_32413-35731' '(at1g75250 : 103.0) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative fsm1, Description = RADIALIS, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf05089_41681-50903' '(at3g16350 : 215.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1); Has 2847 Blast hits to 2586 proteins in 268 species: Archae - 0; Bacteria - 117; Metazoa - 791; Fungi - 88; Plants - 1494; Viruses - 13; Other Eukaryotes - 344 (source: NCBI BLink). & (reliability: 430.0) & (original description: Putative myb5, Description = Putative MYB transcription factor, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf05279_343388-345654' '(at1g75250 : 111.0) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative RL3, Description = Protein RADIALIS-like 3, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf05449_302004-316373' '(at5g56840 : 154.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1); Has 1025 Blast hits to 1022 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 894; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative MYB1, Description = Putative MYB transcription factor, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf05588_1140727-1149845' '(at5g08520 : 168.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G23650.1); Has 2184 Blast hits to 2148 proteins in 187 species: Archae - 0; Bacteria - 10; Metazoa - 113; Fungi - 60; Plants - 1413; Viruses - 0; Other Eukaryotes - 588 (source: NCBI BLink). & (gnl|cdd|35943 : 113.0) no description available & (reliability: 336.0) & (original description: Putative myb, Description = MYB transcription factor, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf05736_47269-51666' '(at5g47390 : 342.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G16350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 684.0) & (original description: Putative myb4, Description = Myb transcription factor, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf05767_312048-350967' '(at5g05790 : 164.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT3G11280.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35943 : 110.0) no description available & (reliability: 328.0) & (original description: Putative myb3, Description = MYB transcription factor, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf05858_105568-108431' '(at5g61620 : 94.4) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative myb, Description = Putative MYB DNA-binding domain superfamily protein, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf06189_262488-265935' '(at5g58900 : 279.0) Homeodomain-like transcriptional regulator; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT2G38090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35943 : 128.0) no description available & (reliability: 558.0) & (original description: Putative myb8, Description = MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf07223_104146-110688' '(at3g09600 : 241.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 9 processes; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: LHY/CCA1-like 1 (TAIR:AT5G02840.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35943 : 84.6) no description available & (reliability: 482.0) & (original description: Putative myb, Description = MYB3, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf07437_120794-123870' '(at1g70000 : 159.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1). & (reliability: 318.0) & (original description: Putative myb, Description = MYB12, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf07611_104509-107873' '(at1g49010 : 217.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G08520.1); Has 2158 Blast hits to 2138 proteins in 225 species: Archae - 0; Bacteria - 22; Metazoa - 311; Fungi - 95; Plants - 1498; Viruses - 2; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|35943 : 126.0) no description available & (reliability: 434.0) & (original description: Putative myb3, Description = Putative MYB transcription factor, PFAM = PF00249;PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf08137_184544-198386' '(at1g18330 : 124.0) EARLY-PHYTOCHROME-RESPONSIVE1; EARLY-PHYTOCHROME-RESPONSIVE1 (EPR1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G10113.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative MYBR, Description = Transcription factor MYBR, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf08293_182031-186581' '(at5g61620 : 149.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative MYB128, Description = MYB transcription factor MYB128, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf09170_151921-162244' '(at1g17520 : 183.0) Homeodomain-like/winged-helix DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like/winged-helix DNA-binding family protein (TAIR:AT1G72740.1); Has 882 Blast hits to 875 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 109; Fungi - 89; Plants - 618; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative myb5, Description = Putative MYB transcription factor, PFAM = PF00249;PF00538)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf09367_107898-123329' '(at5g52660 : 255.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G01280.1); Has 1360 Blast hits to 1350 proteins in 120 species: Archae - 0; Bacteria - 4; Metazoa - 93; Fungi - 8; Plants - 1059; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink). & (gnl|cdd|35943 : 99.2) no description available & (reliability: 510.0) & (original description: Putative RVE6, Description = Protein REVEILLE 6, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf09427_198531-200440' '(at5g08520 : 88.6) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G23650.1); Has 2184 Blast hits to 2148 proteins in 187 species: Archae - 0; Bacteria - 10; Metazoa - 113; Fungi - 60; Plants - 1413; Viruses - 0; Other Eukaryotes - 588 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative myb3, Description = MYBR domain class transcription factor, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf09505_34050-38297' '(at1g49950 : 252.0) Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.; telomere repeat binding factor 1 (TRB1); FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 504.0) & (original description: Putative TRB1, Description = Telomere repeat-binding factor 1, PFAM = PF00538;PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf09512_532782-543017' '(at5g52660 : 237.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G01280.1); Has 1360 Blast hits to 1350 proteins in 120 species: Archae - 0; Bacteria - 4; Metazoa - 93; Fungi - 8; Plants - 1059; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink). & (gnl|cdd|35943 : 103.0) no description available & (reliability: 474.0) & (original description: Putative RVE3, Description = Protein REVEILLE 3, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf09512_533191-542527' '(at5g52660 : 113.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G01280.1); Has 1360 Blast hits to 1350 proteins in 120 species: Archae - 0; Bacteria - 4; Metazoa - 93; Fungi - 8; Plants - 1059; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative myb, Description = Myb-like protein G, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf09590_373740-377548' '(at5g17300 : 158.0) Myb-like transcription factor that regulates hypocotyl growth by regulating free auxin levels in a time-of-day specific manner.; REVEILLE 1 (RVE1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G37260.1); Has 1557 Blast hits to 1521 proteins in 166 species: Archae - 0; Bacteria - 3; Metazoa - 201; Fungi - 29; Plants - 1060; Viruses - 9; Other Eukaryotes - 255 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative LHY, Description = Putative uncharacterized protein LHY, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf10228_65497-71801' '(at3g09600 : 119.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 9 processes; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: LHY/CCA1-like 1 (TAIR:AT5G02840.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative myb, Description = MYB10, PFAM = )' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf11325_86172-96362' '(at1g49950 : 116.0) Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.; telomere repeat binding factor 1 (TRB1); FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative myb13, Description = Histone H1, PFAM = PF00538)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf13995_211074-216634' '(at1g49950 : 243.0) Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.; telomere repeat binding factor 1 (TRB1); FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative SMH5, Description = Single myb histone 5, PFAM = PF00538;PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf16660_286335-289636' '(at1g49010 : 245.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G08520.1); Has 2158 Blast hits to 2138 proteins in 225 species: Archae - 0; Bacteria - 22; Metazoa - 311; Fungi - 95; Plants - 1498; Viruses - 2; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|35943 : 123.0) no description available & (reliability: 490.0) & (original description: Putative MYB28, Description = Putative MYB-related protein 28, PFAM = PF00249;PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf21409_115861-119402' '(at1g74840 : 167.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 9 processes; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G19000.2). & (reliability: 334.0) & (original description: Putative myb, Description = Myb-like protein J, PFAM = PF00249)' T '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'niben101scf26781_1-6641' '(at1g17520 : 191.0) Homeodomain-like/winged-helix DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like/winged-helix DNA-binding family protein (TAIR:AT1G72740.1); Has 882 Blast hits to 875 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 109; Fungi - 89; Plants - 618; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative myb68, Description = MYB-related protein, PFAM = PF00538;PF13921)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.3scaffold3488_64738-74259' '(at5g22380 : 223.0) NAC domain containing protein 90 (NAC090); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 61 (TAIR:AT3G44350.2); Has 2731 Blast hits to 2726 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2731; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 143.0) no description available & (q53nf7|nac71_orysa : 113.0) NAC domain-containing protein 71 (ONAC071) - Oryza sativa (Rice) & (reliability: 404.0) & (original description: Putative NAC090, Description = NAC domain-containing protein 90, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.3scaffold7265_33627-41134' '(at1g56010 : 302.0) Encodes a transcription factor involved in shoot apical meristem formation and auxin-mediated lateral root formation. The gene is thought not to be involved in stress responses (NaCl, auxins, ethylene). NAC1 (NAC1); NAC domain containing protein 1 (NAC1); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT3G12977.1); Has 2928 Blast hits to 2921 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2928; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 192.0) no description available & (q5cd17|nac77_orysa : 181.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 604.0) & (original description: Putative NAC021, Description = NAC domain-containing protein 21/22, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.3scaffold11458_13989-27238' '(at3g56570 : 493.0) SET domain-containing protein; CONTAINS InterPro DOMAIN/s: RuBisCO-cytochrome methylase, RMS1 (InterPro:IPR011383); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT1G14030.1); Has 25210 Blast hits to 12491 proteins in 636 species: Archae - 52; Bacteria - 1284; Metazoa - 10981; Fungi - 2786; Plants - 1267; Viruses - 743; Other Eukaryotes - 8097 (source: NCBI BLink). & (gnl|cdd|36551 : 104.0) no description available & (reliability: 986.0) & (original description: Putative Os01g0879500, Description = Os01g0879500 protein, PFAM = PF00856)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.3scaffold11458_14148-24289' '(at3g56570 : 488.0) SET domain-containing protein; CONTAINS InterPro DOMAIN/s: RuBisCO-cytochrome methylase, RMS1 (InterPro:IPR011383); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT1G14030.1); Has 25210 Blast hits to 12491 proteins in 636 species: Archae - 52; Bacteria - 1284; Metazoa - 10981; Fungi - 2786; Plants - 1267; Viruses - 743; Other Eukaryotes - 8097 (source: NCBI BLink). & (gnl|cdd|36551 : 101.0) no description available & (reliability: 976.0) & (original description: Putative ZOSMA_3G00600, Description = SET domain-containing protein, PFAM = PF00856)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.3scaffold39800_10395-16150' '(at3g49530 : 264.0) Transcription factor that serves as a molecular link between cold signals and pathogen resistance responses. Undergoes proteolytic processing triggered by cold-induced changes in membrane fluidity.; NAC domain containing protein 62 (NAC062); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: TCV-interacting protein (TAIR:AT5G24590.2); Has 2933 Blast hits to 2926 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2931; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 200.0) no description available & (q5z6b6|nac76_orysa : 155.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (reliability: 492.0) & (original description: Putative NAC091, Description = NAC domain-containing protein 91, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.3scaffold58436_1862-8109' '(at1g65910 : 426.0) NAC domain containing protein 28 (NAC028); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 86 (TAIR:AT5G17260.1); Has 3059 Blast hits to 3053 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 3044; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66085 : 228.0) no description available & (q7gcl7|nac74_orysa : 224.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 852.0) & (original description: Putative NAC1, Description = NAC domain-containing protein 78, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.3scaffold66920_1-3258' '(at4g28530 : 101.0) NAC domain containing protein 74 (NAC074); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT5G53950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative CUC3, Description = Transcription factor, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.5scaffold8_969393-982686' '(at3g56570 : 444.0) SET domain-containing protein; CONTAINS InterPro DOMAIN/s: RuBisCO-cytochrome methylase, RMS1 (InterPro:IPR011383); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT1G14030.1); Has 25210 Blast hits to 12491 proteins in 636 species: Archae - 52; Bacteria - 1284; Metazoa - 10981; Fungi - 2786; Plants - 1267; Viruses - 743; Other Eukaryotes - 8097 (source: NCBI BLink). & (gnl|cdd|36551 : 96.3) no description available & (reliability: 888.0) & (original description: Putative Os01g0879500, Description = Os01g0879500 protein, PFAM = PF00856)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.5scaffold162_627081-634156' '(at1g65910 : 427.0) NAC domain containing protein 28 (NAC028); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 86 (TAIR:AT5G17260.1); Has 3059 Blast hits to 3053 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 3044; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66085 : 224.0) no description available & (q7gcl7|nac74_orysa : 220.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 854.0) & (original description: Putative NAC78, Description = NAC transcription factor, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.5scaffold2008_374831-377622' '(q7f2l3|nac48_orysa : 135.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (at1g77450 : 134.0) NAC domain containing protein 32 (NAC032); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT1G01720.1); Has 3015 Blast hits to 3009 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3015; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 108.0) no description available & (reliability: 256.0) & (original description: Putative ATAF, Description = NAC transcription factor, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.5scaffold2720_243198-255776' '(at1g65910 : 317.0) NAC domain containing protein 28 (NAC028); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 86 (TAIR:AT5G17260.1); Has 3059 Blast hits to 3053 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 3044; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66085 : 218.0) no description available & (q7gcl7|nac74_orysa : 213.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 634.0) & (original description: Putative AIF, Description = NAC domain-containing protein 78, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.5scaffold4881_42925-46513' '(at4g27410 : 357.0) Encodes a NAC transcription factor induced in response to dessication. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response.; RESPONSIVE TO DESICCATION 26 (RD26); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 19 (TAIR:AT1G52890.1); Has 2991 Blast hits to 2983 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2991; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 233.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 199.0) no description available & (reliability: 658.0) & (original description: Putative nac, Description = NAC transcription factor, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.5scaffold5440_109687-117402' '(q7f2l3|nac48_orysa : 182.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (at1g61110 : 181.0) NAC domain containing protein 25 (NAC025); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 2 (TAIR:AT3G15510.1); Has 3019 Blast hits to 3014 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3011; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|66085 : 171.0) no description available & (reliability: 332.0) & (original description: Putative AF1, Description = NAC domain-containing protein 2, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.5scaffold5443_80606-86912' '(at1g65910 : 411.0) NAC domain containing protein 28 (NAC028); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 86 (TAIR:AT5G17260.1); Has 3059 Blast hits to 3053 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 3044; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66085 : 226.0) no description available & (q7gcl7|nac74_orysa : 214.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 822.0) & (original description: Putative NAC086, Description = NAC domain-containing protein 86, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'nbv0.5scaffold6458_45575-55408' '(at4g28530 : 276.0) NAC domain containing protein 74 (NAC074); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT5G53950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66085 : 189.0) no description available & (q5cd17|nac77_orysa : 185.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 552.0) & (original description: Putative NAC17, Description = NAC domain protein 17, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben044scf00006606ctg006_104-4178' '(at3g15510 : 318.0) Note of caution: not to be confused with another protein (AtNAC6 locus AT5G39610) which on occasion has also been referred to as AtNAC2.; NAC domain containing protein 2 (NAC2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT1G52880.1); Has 3051 Blast hits to 3043 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 3049; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 241.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 219.0) no description available & (reliability: 636.0) & (original description: Putative NAC056, Description = NAC transcription factor 56, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben044scf00011424ctg011_1-3845' '(gnl|cdd|66085 : 112.0) no description available & (at1g61110 : 104.0) NAC domain containing protein 25 (NAC025); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 2 (TAIR:AT3G15510.1); Has 3019 Blast hits to 3014 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3011; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q7ezt1|nac67_orysa : 103.0) NAC domain-containing protein 67 (ONAC067) - Oryza sativa (Rice) & (reliability: 206.0) & (original description: Putative NAC1, Description = NAC domain-containing protein 18, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben044scf00014647ctg011_714-5416' '(at2g43000 : 231.0) NAC domain containing protein 42 (NAC042); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT3G12910.1); Has 2932 Blast hits to 2927 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2932; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 177.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 170.0) no description available & (reliability: 436.0) & (original description: Putative JUB1, Description = Transcription factor JUNGBRUNNEN 1, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben044scf00029613ctg027_11021-14690' '(at1g61110 : 279.0) NAC domain containing protein 25 (NAC025); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 2 (TAIR:AT3G15510.1); Has 3019 Blast hits to 3014 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3011; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q52qh4|nac68_orysa : 250.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 220.0) no description available & (reliability: 520.0) & (original description: Putative NAC5, Description = NAC family transcription factor 5, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101ctg15807_1-2966' '(at4g27410 : 355.0) Encodes a NAC transcription factor induced in response to dessication. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response.; RESPONSIVE TO DESICCATION 26 (RD26); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 19 (TAIR:AT1G52890.1); Has 2991 Blast hits to 2983 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2991; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 231.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 199.0) no description available & (reliability: 660.0) & (original description: Putative nac, Description = NAC transcription factor, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101ctg15860_1-3379' '(at2g43000 : 260.0) NAC domain containing protein 42 (NAC042); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT3G12910.1); Has 2932 Blast hits to 2927 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2932; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 176.0) no description available & (q52qh4|nac68_orysa : 171.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 472.0) & (original description: Putative NAC10, Description = NAC protein 10, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf00046_241828-249174' '(at3g01600 : 279.0) NAC domain containing protein 44 (NAC044); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 85 (TAIR:AT5G14490.1); Has 1967 Blast hits to 1962 proteins in 64 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1967; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 103.0) no description available & (reliability: 558.0) & (original description: Putative NAC6, Description = NAC domain protein, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf00109_279350-282537' '(at2g33480 : 111.0) NAC domain containing protein 41 (NAC041); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 83 (TAIR:AT5G13180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q52qh4|nac68_orysa : 100.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 97.3) no description available & (reliability: 222.0) & (original description: Putative NH5, Description = Nam-like protein 5, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf00308_147922-154756' '(at3g49530 : 273.0) Transcription factor that serves as a molecular link between cold signals and pathogen resistance responses. Undergoes proteolytic processing triggered by cold-induced changes in membrane fluidity.; NAC domain containing protein 62 (NAC062); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: TCV-interacting protein (TAIR:AT5G24590.2); Has 2933 Blast hits to 2926 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2931; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 209.0) no description available & (q5z6b6|nac76_orysa : 167.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (reliability: 524.0) & (original description: Putative NAC062, Description = NAC domain-containing protein 62, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf00944_440354-446612' '(at4g28530 : 258.0) NAC domain containing protein 74 (NAC074); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT5G53950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66085 : 185.0) no description available & (q5cd17|nac77_orysa : 170.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 516.0) & (original description: Putative NAC17, Description = NAC domain protein 17, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf01320_106758-113850' '(at1g65910 : 419.0) NAC domain containing protein 28 (NAC028); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 86 (TAIR:AT5G17260.1); Has 3059 Blast hits to 3053 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 3044; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66085 : 227.0) no description available & (q7gcl7|nac74_orysa : 213.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 838.0) & (original description: Putative NAC086, Description = NAC domain-containing protein 86, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf01450_596007-601893' '(at1g77450 : 197.0) NAC domain containing protein 32 (NAC032); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT1G01720.1); Has 3015 Blast hits to 3009 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3015; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q7f2l3|nac48_orysa : 195.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (gnl|cdd|66085 : 170.0) no description available & (reliability: 374.0) & (original description: Putative AF1, Description = NAC domain protein, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf01526_407570-411080' '(at4g17980 : 237.0) NAC domain containing protein 71 (NAC071); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 96 (TAIR:AT5G46590.1); Has 2972 Blast hits to 2965 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2972; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 215.0) no description available & (q7gcl7|nac74_orysa : 164.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 428.0) & (original description: Putative NH11, Description = Nam-like protein 11, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf02210_176340-179262' '(at5g13180 : 252.0) Encodes a NAC domain transcription factor that interacts with VND7 and negatively regulates xylem vessel formation.; NAC domain containing protein 83 (NAC083); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 41 (TAIR:AT2G33480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66085 : 193.0) no description available & (q53nf7|nac71_orysa : 166.0) NAC domain-containing protein 71 (ONAC071) - Oryza sativa (Rice) & (reliability: 456.0) & (original description: Putative NAC083, Description = NAC domain-containing protein 83, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf02340_617695-621364' '(at1g61110 : 253.0) NAC domain containing protein 25 (NAC025); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 2 (TAIR:AT3G15510.1); Has 3019 Blast hits to 3014 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3011; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q7f2l3|nac48_orysa : 228.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (gnl|cdd|66085 : 220.0) no description available & (reliability: 472.0) & (original description: Putative JA, Description = NAC domain-containing protein 29, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf02413_234713-239708' '(q53nf7|nac71_orysa : 180.0) NAC domain-containing protein 71 (ONAC071) - Oryza sativa (Rice) & (at1g61110 : 178.0) NAC domain containing protein 25 (NAC025); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 2 (TAIR:AT3G15510.1); Has 3019 Blast hits to 3014 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3011; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|66085 : 169.0) no description available & (reliability: 328.0) & (original description: Putative AF1, Description = NAC domain-containing protein 2, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf02433_68125-74804' '(at1g65910 : 415.0) NAC domain containing protein 28 (NAC028); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 86 (TAIR:AT5G17260.1); Has 3059 Blast hits to 3053 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 3044; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66085 : 226.0) no description available & (q7gcl7|nac74_orysa : 214.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 830.0) & (original description: Putative NAC086, Description = NAC domain-containing protein 86, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf02983_133589-140079' '(at3g49530 : 268.0) Transcription factor that serves as a molecular link between cold signals and pathogen resistance responses. Undergoes proteolytic processing triggered by cold-induced changes in membrane fluidity.; NAC domain containing protein 62 (NAC062); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: TCV-interacting protein (TAIR:AT5G24590.2); Has 2933 Blast hits to 2926 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2931; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 208.0) no description available & (q5z6b6|nac76_orysa : 166.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (reliability: 528.0) & (original description: Putative Nh1, Description = Nam-like protein 1, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf03160_103494-107976' '(at5g22380 : 247.0) NAC domain containing protein 90 (NAC090); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 61 (TAIR:AT3G44350.2); Has 2731 Blast hits to 2726 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2731; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 143.0) no description available & (q52qh4|nac68_orysa : 127.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 464.0) & (original description: Putative NAC090, Description = NAC domain-containing protein 90, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf03204_193712-196939' '(at4g27410 : 367.0) Encodes a NAC transcription factor induced in response to dessication. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response.; RESPONSIVE TO DESICCATION 26 (RD26); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 19 (TAIR:AT1G52890.1); Has 2991 Blast hits to 2983 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2991; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 245.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 210.0) no description available & (reliability: 692.0) & (original description: Putative nac, Description = NAC transcription factor, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf03366_59441-66590' '(at4g28530 : 199.0) NAC domain containing protein 74 (NAC074); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT5G53950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66085 : 130.0) no description available & (q5cd17|nac77_orysa : 129.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 398.0) & (original description: Putative cuc3, Description = NAC transcription factor, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf03695_197287-200847' '(at3g10490 : 84.0) NAC domain containing protein 52 (NAC052); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, pollen development; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 50 (TAIR:AT3G10480.1); Has 3394 Blast hits to 3360 proteins in 132 species: Archae - 4; Bacteria - 13; Metazoa - 65; Fungi - 17; Plants - 3017; Viruses - 4; Other Eukaryotes - 274 (source: NCBI BLink). & (q52qh4|nac68_orysa : 82.8) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 164.8) & (original description: Putative PGSC0003DMG400007065, Description = , PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf03987_57287-62418' '(gnl|cdd|66085 : 94.2) no description available & (at1g69490 : 92.8) Encodes a member of the NAC transcription factor gene family. It is expressed in floral primordia and upregulated by AP3 and PI. Its expression is associated with leaf senescence.; NAC-like, activated by AP3/PI (NAP); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 25 (TAIR:AT1G61110.1); Has 3046 Blast hits to 3040 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3046; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative , Description = , PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf04099_829815-836572' '(at3g49530 : 263.0) Transcription factor that serves as a molecular link between cold signals and pathogen resistance responses. Undergoes proteolytic processing triggered by cold-induced changes in membrane fluidity.; NAC domain containing protein 62 (NAC062); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: TCV-interacting protein (TAIR:AT5G24590.2); Has 2933 Blast hits to 2926 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2931; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 202.0) no description available & (q5z6b6|nac76_orysa : 157.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (reliability: 492.0) & (original description: Putative NAC091, Description = NAC domain-containing protein 91, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf04323_106889-111591' '(at2g43000 : 230.0) NAC domain containing protein 42 (NAC042); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT3G12910.1); Has 2932 Blast hits to 2927 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2932; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 177.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 169.0) no description available & (reliability: 434.0) & (original description: Putative JUB1, Description = Transcription factor JUNGBRUNNEN 1, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf04496_95351-99070' '(at3g15510 : 313.0) Note of caution: not to be confused with another protein (AtNAC6 locus AT5G39610) which on occasion has also been referred to as AtNAC2.; NAC domain containing protein 2 (NAC2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT1G52880.1); Has 3051 Blast hits to 3043 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 3049; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 242.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 219.0) no description available & (reliability: 626.0) & (original description: Putative NAC056, Description = NAC transcription factor 56, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf05649_257203-268471' '(at3g56570 : 487.0) SET domain-containing protein; CONTAINS InterPro DOMAIN/s: RuBisCO-cytochrome methylase, RMS1 (InterPro:IPR011383); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT1G14030.1); Has 25210 Blast hits to 12491 proteins in 636 species: Archae - 52; Bacteria - 1284; Metazoa - 10981; Fungi - 2786; Plants - 1267; Viruses - 743; Other Eukaryotes - 8097 (source: NCBI BLink). & (gnl|cdd|36551 : 107.0) no description available & (reliability: 974.0) & (original description: Putative Os01g0879500, Description = Os01g0879500 protein, PFAM = PF00856)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf05649_257895-268378' '(at3g56570 : 485.0) SET domain-containing protein; CONTAINS InterPro DOMAIN/s: RuBisCO-cytochrome methylase, RMS1 (InterPro:IPR011383); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT1G14030.1); Has 25210 Blast hits to 12491 proteins in 636 species: Archae - 52; Bacteria - 1284; Metazoa - 10981; Fungi - 2786; Plants - 1267; Viruses - 743; Other Eukaryotes - 8097 (source: NCBI BLink). & (gnl|cdd|36551 : 104.0) no description available & (reliability: 970.0) & (original description: Putative Os01g0879500, Description = Os01g0879500 protein, PFAM = PF00856)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf05821_221461-224906' '(at5g13180 : 220.0) Encodes a NAC domain transcription factor that interacts with VND7 and negatively regulates xylem vessel formation.; NAC domain containing protein 83 (NAC083); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 41 (TAIR:AT2G33480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66085 : 171.0) no description available & (q52qh4|nac68_orysa : 148.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 412.0) & (original description: Putative NAC2, Description = NAC transcription factor, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf06588_132295-135580' '(at1g61110 : 227.0) NAC domain containing protein 25 (NAC025); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 2 (TAIR:AT3G15510.1); Has 3019 Blast hits to 3014 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3011; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q52qh4|nac68_orysa : 197.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 195.0) no description available & (reliability: 448.0) & (original description: Putative JA, Description = NAC domain-containing protein 29, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf06757_84240-90487' '(at1g65910 : 416.0) NAC domain containing protein 28 (NAC028); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 86 (TAIR:AT5G17260.1); Has 3059 Blast hits to 3053 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 3044; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66085 : 227.0) no description available & (q7gcl7|nac74_orysa : 224.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 832.0) & (original description: Putative NAC086, Description = NAC domain-containing protein 86, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf07850_886140-888478' '(at5g22380 : 128.0) NAC domain containing protein 90 (NAC090); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 61 (TAIR:AT3G44350.2); Has 2731 Blast hits to 2726 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2731; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 87.3) no description available & (reliability: 256.0) & (original description: Putative TERN, Description = NAC domain-containing protein 90, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf08028_65217-70571' '(at3g15510 : 303.0) Note of caution: not to be confused with another protein (AtNAC6 locus AT5G39610) which on occasion has also been referred to as AtNAC2.; NAC domain containing protein 2 (NAC2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT1G52880.1); Has 3051 Blast hits to 3043 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 3049; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 230.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 210.0) no description available & (reliability: 606.0) & (original description: Putative NAC056, Description = NAC transcription factor 56, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf09792_341704-349403' '(at4g28530 : 261.0) NAC domain containing protein 74 (NAC074); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT5G53950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66085 : 191.0) no description available & (q5cd17|nac77_orysa : 168.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 522.0) & (original description: Putative NAC17, Description = NAC domain-containing protein, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf11773_166988-173419' '(at4g28530 : 277.0) NAC domain containing protein 74 (NAC074); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT5G53950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66085 : 193.0) no description available & (q5cd17|nac77_orysa : 179.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 554.0) & (original description: Putative NAC17, Description = NAC domain protein 17, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf14516_1-72408' '(at4g27410 : 360.0) Encodes a NAC transcription factor induced in response to dessication. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response.; RESPONSIVE TO DESICCATION 26 (RD26); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 19 (TAIR:AT1G52890.1); Has 2991 Blast hits to 2983 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2991; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 236.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 204.0) no description available & (reliability: 672.0) & (original description: Putative nac, Description = NAC transcription factor, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf20828_55628-58208' '(at5g13180 : 216.0) Encodes a NAC domain transcription factor that interacts with VND7 and negatively regulates xylem vessel formation.; NAC domain containing protein 83 (NAC083); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 41 (TAIR:AT2G33480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66085 : 171.0) no description available & (q52qh4|nac68_orysa : 148.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 402.0) & (original description: Putative NAC2, Description = NAC transcription factor, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf27945_59694-66598' '(at3g49530 : 258.0) Transcription factor that serves as a molecular link between cold signals and pathogen resistance responses. Undergoes proteolytic processing triggered by cold-induced changes in membrane fluidity.; NAC domain containing protein 62 (NAC062); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: TCV-interacting protein (TAIR:AT5G24590.2); Has 2933 Blast hits to 2926 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2931; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 203.0) no description available & (q5z6b6|nac76_orysa : 159.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (reliability: 498.0) & (original description: Putative NAC06, Description = NAC domain-containing protein, PFAM = PF02365)' T '27.3.27' 'RNA.regulation of transcription.NAC domain transcription factor family' 'niben101scf39126_3549-8165' '(at4g28530 : 263.0) NAC domain containing protein 74 (NAC074); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT5G53950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66085 : 189.0) no description available & (q5cd17|nac77_orysa : 181.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 526.0) & (original description: Putative NAC17, Description = NAC domain protein 17, PFAM = PF02365)' T '27.3.28' 'RNA.regulation of transcription.SBP,Squamosa promoter binding protein family' '' '' '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.3scaffold7106_1-1712' '(at3g27010 : 86.3) Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1;1. Involved in regulation of expression of cell cycle control and ribosomal protein genes.; "TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20" (TCP20); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT5G41030.1); Has 543 Blast hits to 539 proteins in 120 species: Archae - 0; Bacteria - 15; Metazoa - 2; Fungi - 0; Plants - 525; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.3scaffold11532_18220-21931' '(gnl|cdd|67262 : 111.0) no description available & (at3g18550 : 103.0) Encodes a TCP transcription factor, closely related to teosinte branched1, arrests axillary bud development and prevents axillary bud outgrowth.; BRANCHED 1 (BRC1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of secondary shoot formation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: axillary bud, axillary bud meristem; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP domain protein 12 (TAIR:AT1G68800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative BRC1, Description = BRANCHED1A isoform 1, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.3scaffold15273_449-3628' '(gnl|cdd|67262 : 121.0) no description available & (at1g67260 : 109.0) Encodes protein with TCP (TB1,CYC,PCF) domain which is likely to be involved in DNA binding and protein-protein interactions. Based on genome analysis, there is a 9-member gene family that possesses this domain in Arabidopsis. Orthologue of Antirrhinum gene CYCLOIDEA.; TCP1; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development; LOCATED IN: cellular_component unknown; EXPRESSED IN: floral meristem; EXPRESSED DURING: 1 floral meristem visible, 2 floral meristem notched; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP domain protein 12 (TAIR:AT1G68800.1); Has 1627 Blast hits to 1627 proteins in 374 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1623; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative CYC, Description = Transcription factor TCP4, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.3scaffold23240_26945-30213' '(gnl|cdd|67262 : 122.0) no description available & (at4g18390 : 120.0) "TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2" (TCP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: cell differentiation, positive regulation of development, heterochronic, regulation of transcription, leaf morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 (TAIR:AT1G30210.2); Has 2182 Blast hits to 1888 proteins in 369 species: Archae - 0; Bacteria - 6; Metazoa - 128; Fungi - 15; Plants - 1699; Viruses - 0; Other Eukaryotes - 334 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative TCP24, Description = TCP transcription factor 24, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.3scaffold26085_19040-22167' '(gnl|cdd|67262 : 129.0) no description available & (at1g68800 : 114.0) Encodes a TCP transcription factor, closely related to teosinte branched1, arrests axillary bud development and prevents axillary bud outgrowth. Transcription level and mutant phenotype are weaker than its homolog BRC1 (At3G18550).; TCP domain protein 12 (TCP12); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G67260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative cyc2c, Description = BRANCHED1A isoform 1, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.3scaffold47044_9314-12307' '(at2g31070 : 115.0) TCP family protein involved in heterchronic regulation of leaf differentiation.; TCP domain protein 10 (TCP10); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor 4 (TAIR:AT3G15030.3); Has 1897 Blast hits to 1802 proteins in 357 species: Archae - 0; Bacteria - 4; Metazoa - 259; Fungi - 36; Plants - 1423; Viruses - 0; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|67262 : 103.0) no description available & (reliability: 230.0) & (original description: Putative BRC1, Description = Transcription factor PCF8, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.3scaffold48023_6534-11459' '(at3g47620 : 123.0) Encodes a transcription factor AtTCP14 that regulates seed germination. AtTCP14 shows elevated expression level just prior to germination. AtTCP14 is predominantly expressed in the vascular tissue of the embryo, and affects gene expression in radicles in a non-cell-autonomous manner.; "TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14" (TCP14); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G58100.1); Has 1158 Blast hits to 1082 proteins in 149 species: Archae - 2; Bacteria - 69; Metazoa - 397; Fungi - 50; Plants - 507; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|67262 : 113.0) no description available & (reliability: 244.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.3scaffold48752_4245-7225' '(at5g60970 : 142.0) TCP gene involved in heterochronic control of leaf differentiation.; "TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5" (TCP5); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP domain protein 17 (TAIR:AT5G08070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67262 : 118.0) no description available & (reliability: 284.0) & (original description: Putative BRC1, Description = Transcription factor PCF8, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.3scaffold50397_8503-11468' '(at1g35560 : 156.0) TCP family transcription factor ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G72010.1); Has 382 Blast hits to 382 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 2; Plants - 349; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|67262 : 110.0) no description available & (reliability: 312.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.3scaffold57228_401-3666' '(at3g15030 : 223.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 121.0) no description available & (reliability: 446.0) & (original description: Putative TCP4, Description = Transcription factor TCP4, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.3scaffold73662_2907-6160' '(at3g15030 : 256.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 120.0) no description available & (reliability: 512.0) & (original description: Putative TCP4, Description = Transcription factor TCP4, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.3scaffold77707_3668-6597' '(at3g15030 : 149.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 115.0) no description available & (reliability: 298.0) & (original description: Putative cyc2c, Description = Transcription factor PCF8, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.3scaffold83624_318-3412' '(at3g15030 : 123.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 107.0) no description available & (reliability: 246.0) & (original description: Putative BRC1, Description = Transcription factor PCF8, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.5scaffold200_59457-62545' '(at3g15030 : 119.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 102.0) no description available & (reliability: 238.0) & (original description: Putative BRC1, Description = Transcription factor PCF8, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.5scaffold1355_430332-433216' '(at3g27010 : 166.0) Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1;1. Involved in regulation of expression of cell cycle control and ribosomal protein genes.; "TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20" (TCP20); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT5G41030.1); Has 543 Blast hits to 539 proteins in 120 species: Archae - 0; Bacteria - 15; Metazoa - 2; Fungi - 0; Plants - 525; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|67262 : 109.0) no description available & (reliability: 332.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.5scaffold4868_21389-24939' '(at1g58100 : 160.0) TCP family transcription factor ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G35560.1); Has 396 Blast hits to 390 proteins in 36 species: Archae - 0; Bacteria - 3; Metazoa - 45; Fungi - 2; Plants - 334; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|67262 : 106.0) no description available & (reliability: 320.0) & (original description: Putative TCP8, Description = Transcription factor TCP8, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.5scaffold4868_21392-24990' '(at1g58100 : 160.0) TCP family transcription factor ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G35560.1); Has 396 Blast hits to 390 proteins in 36 species: Archae - 0; Bacteria - 3; Metazoa - 45; Fungi - 2; Plants - 334; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|67262 : 105.0) no description available & (reliability: 320.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.5scaffold6266_82587-85465' '(at3g27010 : 191.0) Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1;1. Involved in regulation of expression of cell cycle control and ribosomal protein genes.; "TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20" (TCP20); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT5G41030.1); Has 543 Blast hits to 539 proteins in 120 species: Archae - 0; Bacteria - 15; Metazoa - 2; Fungi - 0; Plants - 525; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|67262 : 105.0) no description available & (reliability: 382.0) & (original description: Putative TCP20, Description = Transcription factor TCP20, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'nbv0.5scaffold8461_31882-35056' '(at3g15030 : 202.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 121.0) no description available & (reliability: 404.0) & (original description: Putative BRC1, Description = Transcription factor PCF8, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben044scf00000388ctg030_32716-35966' '(gnl|cdd|67262 : 113.0) no description available & (at1g67260 : 93.6) Encodes protein with TCP (TB1,CYC,PCF) domain which is likely to be involved in DNA binding and protein-protein interactions. Based on genome analysis, there is a 9-member gene family that possesses this domain in Arabidopsis. Orthologue of Antirrhinum gene CYCLOIDEA.; TCP1; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development; LOCATED IN: cellular_component unknown; EXPRESSED IN: floral meristem; EXPRESSED DURING: 1 floral meristem visible, 2 floral meristem notched; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP domain protein 12 (TAIR:AT1G68800.1); Has 1627 Blast hits to 1627 proteins in 374 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1623; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative cyc2c, Description = BRANCHED1A isoform 1, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben044scf00005191ctg009_1-2659' '(at1g35560 : 175.0) TCP family transcription factor ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G72010.1); Has 382 Blast hits to 382 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 2; Plants - 349; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|67262 : 106.0) no description available & (reliability: 350.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben044scf00010539ctg000_5727-8797' '(at5g51910 : 192.0) TCP family transcription factor ; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT2G45680.1); Has 731 Blast hits to 731 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 731; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67262 : 114.0) no description available & (reliability: 384.0) & (original description: Putative TCP19, Description = Transcription factor TCP19, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben044scf00012283ctg004_1-3792' '(gnl|cdd|67262 : 119.0) no description available & (at1g30210 : 118.0) TCP family protein involved in heterochronic regulation of leaf differentiation.; "TEOSINTE BRANCHED 1, cycloidea, and PCF family 24" (TCP24); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 (TAIR:AT4G18390.2); Has 2035 Blast hits to 1535 proteins in 329 species: Archae - 0; Bacteria - 5; Metazoa - 128; Fungi - 18; Plants - 1446; Viruses - 0; Other Eukaryotes - 438 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative TCP2, Description = Transcription factor TCP2, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben044scf00014998ctg009_5805-9278' '(at3g15030 : 252.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 121.0) no description available & (reliability: 504.0) & (original description: Putative TCP4, Description = Transcription factor TCP4, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben044scf00019500ctg005_5819-8819' '(at1g58100 : 161.0) TCP family transcription factor ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G35560.1); Has 396 Blast hits to 390 proteins in 36 species: Archae - 0; Bacteria - 3; Metazoa - 45; Fungi - 2; Plants - 334; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|67262 : 103.0) no description available & (reliability: 322.0) & (original description: Putative TCP8, Description = Transcription factor TCP8, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben044scf00035738ctg005_7989-10631' '(at4g18390 : 128.0) "TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2" (TCP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: cell differentiation, positive regulation of development, heterochronic, regulation of transcription, leaf morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 (TAIR:AT1G30210.2); Has 2182 Blast hits to 1888 proteins in 369 species: Archae - 0; Bacteria - 6; Metazoa - 128; Fungi - 15; Plants - 1699; Viruses - 0; Other Eukaryotes - 334 (source: NCBI BLink). & (gnl|cdd|67262 : 114.0) no description available & (reliability: 256.0) & (original description: Putative BRC1, Description = Transcription factor PCF8, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben044scf00041320ctg008_2430-18714' '(at3g27010 : 169.0) Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1;1. Involved in regulation of expression of cell cycle control and ribosomal protein genes.; "TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20" (TCP20); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT5G41030.1); Has 543 Blast hits to 539 proteins in 120 species: Archae - 0; Bacteria - 15; Metazoa - 2; Fungi - 0; Plants - 525; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|67262 : 107.0) no description available & (reliability: 338.0) & (original description: Putative TCP20, Description = Transcription factor TCP20, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben044scf00054926ctg003_2350-5683' '(at1g53230 : 208.0) Encodes a member of a recently identified plant transcription factor family that includes Teosinte branched 1, Cycloidea 1, and proliferating cell nuclear antigen (PCNA) factors, PCF1 and 2. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; "TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3" (TCP3); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor 4 (TAIR:AT3G15030.3); Has 1510 Blast hits to 1508 proteins in 333 species: Archae - 0; Bacteria - 12; Metazoa - 43; Fungi - 12; Plants - 1439; Viruses - 2; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|67262 : 121.0) no description available & (reliability: 398.0) & (original description: Putative TCP4, Description = Transcription factor TCP4, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf00332_760373-762750' '(at3g27010 : 137.0) Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1;1. Involved in regulation of expression of cell cycle control and ribosomal protein genes.; "TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20" (TCP20); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT5G41030.1); Has 543 Blast hits to 539 proteins in 120 species: Archae - 0; Bacteria - 15; Metazoa - 2; Fungi - 0; Plants - 525; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|67262 : 104.0) no description available & (reliability: 274.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf00757_523129-526025' '(at3g02150 : 141.0) a chloroplast trans-acting factor of the psbD light-responsive promoter.TCP gene involved in heterochronic control of leaf differentiation.; plastid transcription factor 1 (PTF1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: cell differentiation, positive regulation of development, heterochronic, regulation of transcription, leaf morphogenesis; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 (TAIR:AT5G60970.1); Has 1452 Blast hits to 1452 proteins in 313 species: Archae - 0; Bacteria - 0; Metazoa - 41; Fungi - 8; Plants - 1374; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|67262 : 115.0) no description available & (reliability: 282.0) & (original description: Putative BRC1, Description = Transcription factor PCF8, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf00885_685745-689007' '(gnl|cdd|67262 : 126.0) no description available & (at1g30210 : 122.0) TCP family protein involved in heterochronic regulation of leaf differentiation.; "TEOSINTE BRANCHED 1, cycloidea, and PCF family 24" (TCP24); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 (TAIR:AT4G18390.2); Has 2035 Blast hits to 1535 proteins in 329 species: Archae - 0; Bacteria - 5; Metazoa - 128; Fungi - 18; Plants - 1446; Viruses - 0; Other Eukaryotes - 438 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative TCP2, Description = Transcription factor TCP2, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf01143_1045364-1048344' '(at5g60970 : 143.0) TCP gene involved in heterochronic control of leaf differentiation.; "TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5" (TCP5); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP domain protein 17 (TAIR:AT5G08070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67262 : 118.0) no description available & (reliability: 286.0) & (original description: Putative BRC1, Description = Transcription factor PCF8, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf01338_250005-253132' '(gnl|cdd|67262 : 126.0) no description available & (at1g68800 : 112.0) Encodes a TCP transcription factor, closely related to teosinte branched1, arrests axillary bud development and prevents axillary bud outgrowth. Transcription level and mutant phenotype are weaker than its homolog BRC1 (At3G18550).; TCP domain protein 12 (TCP12); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G67260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative cyc2c, Description = BRANCHED1A isoform 1, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf01917_1090687-1096084' '(at5g23280 : 188.0) TCP family transcription factor ; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT5G08330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67262 : 117.0) no description available & (reliability: 376.0) & (original description: Putative TCP7, Description = Transcription factor TCP7, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf02188_210624-215001' '(at3g27010 : 191.0) Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1;1. Involved in regulation of expression of cell cycle control and ribosomal protein genes.; "TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20" (TCP20); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT5G41030.1); Has 543 Blast hits to 539 proteins in 120 species: Archae - 0; Bacteria - 15; Metazoa - 2; Fungi - 0; Plants - 525; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|67262 : 105.0) no description available & (reliability: 382.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf02272_310854-313825' '(at1g35560 : 168.0) TCP family transcription factor ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G72010.1); Has 382 Blast hits to 382 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 2; Plants - 349; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|67262 : 110.0) no description available & (reliability: 336.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf02337_45989-49317' '(at3g47620 : 141.0) Encodes a transcription factor AtTCP14 that regulates seed germination. AtTCP14 shows elevated expression level just prior to germination. AtTCP14 is predominantly expressed in the vascular tissue of the embryo, and affects gene expression in radicles in a non-cell-autonomous manner.; "TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14" (TCP14); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G58100.1); Has 1158 Blast hits to 1082 proteins in 149 species: Archae - 2; Bacteria - 69; Metazoa - 397; Fungi - 50; Plants - 507; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|67262 : 114.0) no description available & (reliability: 256.0) & (original description: Putative tic, Description = TCP-domain protein, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf02657_105357-108687' '(gnl|cdd|67262 : 108.0) no description available & (at1g68800 : 89.0) Encodes a TCP transcription factor, closely related to teosinte branched1, arrests axillary bud development and prevents axillary bud outgrowth. Transcription level and mutant phenotype are weaker than its homolog BRC1 (At3G18550).; TCP domain protein 12 (TCP12); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G67260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative cyc2c, Description = CYC/TB1, R domain-containing protein, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf02786_199959-203670' '(gnl|cdd|67262 : 110.0) no description available & (at3g18550 : 103.0) Encodes a TCP transcription factor, closely related to teosinte branched1, arrests axillary bud development and prevents axillary bud outgrowth.; BRANCHED 1 (BRC1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of secondary shoot formation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: axillary bud, axillary bud meristem; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP domain protein 12 (TAIR:AT1G68800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative BRC1, Description = BRANCHED1A isoform 1, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf03278_390314-394474' '(at4g18390 : 119.0) "TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2" (TCP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: cell differentiation, positive regulation of development, heterochronic, regulation of transcription, leaf morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 (TAIR:AT1G30210.2); Has 2182 Blast hits to 1888 proteins in 369 species: Archae - 0; Bacteria - 6; Metazoa - 128; Fungi - 15; Plants - 1699; Viruses - 0; Other Eukaryotes - 334 (source: NCBI BLink). & (gnl|cdd|67262 : 113.0) no description available & (reliability: 238.0) & (original description: Putative TCP2, Description = Transcription factor TCP2, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf03932_532492-535766' '(gnl|cdd|67262 : 129.0) no description available & (at1g30210 : 122.0) TCP family protein involved in heterochronic regulation of leaf differentiation.; "TEOSINTE BRANCHED 1, cycloidea, and PCF family 24" (TCP24); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 (TAIR:AT4G18390.2); Has 2035 Blast hits to 1535 proteins in 329 species: Archae - 0; Bacteria - 5; Metazoa - 128; Fungi - 18; Plants - 1446; Viruses - 0; Other Eukaryotes - 438 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative TCP24, Description = TCP transcription factor 24, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf04068_36157-39773' '(at1g58100 : 164.0) TCP family transcription factor ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G35560.1); Has 396 Blast hits to 390 proteins in 36 species: Archae - 0; Bacteria - 3; Metazoa - 45; Fungi - 2; Plants - 334; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|67262 : 106.0) no description available & (reliability: 328.0) & (original description: Putative TCP8, Description = Transcription factor TCP8, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf04068_36208-39722' '(at1g58100 : 157.0) TCP family transcription factor ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G35560.1); Has 396 Blast hits to 390 proteins in 36 species: Archae - 0; Bacteria - 3; Metazoa - 45; Fungi - 2; Plants - 334; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|67262 : 105.0) no description available & (reliability: 314.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf04366_133911-137135' '(gnl|cdd|67262 : 121.0) no description available & (at1g67260 : 109.0) Encodes protein with TCP (TB1,CYC,PCF) domain which is likely to be involved in DNA binding and protein-protein interactions. Based on genome analysis, there is a 9-member gene family that possesses this domain in Arabidopsis. Orthologue of Antirrhinum gene CYCLOIDEA.; TCP1; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development; LOCATED IN: cellular_component unknown; EXPRESSED IN: floral meristem; EXPRESSED DURING: 1 floral meristem visible, 2 floral meristem notched; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP domain protein 12 (TAIR:AT1G68800.1); Has 1627 Blast hits to 1627 proteins in 374 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1623; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative cyc2c, Description = Transcription factor TCP4, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf05081_224327-226965' '(at2g37000 : 126.0) TCP family transcription factor ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G58100.1); Has 346 Blast hits to 346 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 346; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67262 : 112.0) no description available & (reliability: 252.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf05177_471447-474400' '(at5g23280 : 203.0) TCP family transcription factor ; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT5G08330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67262 : 111.0) no description available & (reliability: 406.0) & (original description: Putative TCP7, Description = Transcription factor TCP7, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf05229_198307-201380' '(at1g69690 : 150.0) TCP family transcription factor ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 (TAIR:AT3G47620.1); Has 863 Blast hits to 861 proteins in 131 species: Archae - 0; Bacteria - 6; Metazoa - 120; Fungi - 15; Plants - 698; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|67262 : 116.0) no description available & (reliability: 300.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf05396_312128-314466' '(at4g18390 : 123.0) "TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2" (TCP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: cell differentiation, positive regulation of development, heterochronic, regulation of transcription, leaf morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 (TAIR:AT1G30210.2); Has 2182 Blast hits to 1888 proteins in 369 species: Archae - 0; Bacteria - 6; Metazoa - 128; Fungi - 15; Plants - 1699; Viruses - 0; Other Eukaryotes - 334 (source: NCBI BLink). & (gnl|cdd|67262 : 116.0) no description available & (reliability: 246.0) & (original description: Putative BRC1, Description = Transcription factor PCF8, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf05552_834602-837675' '(at5g51910 : 194.0) TCP family transcription factor ; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT2G45680.1); Has 731 Blast hits to 731 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 731; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67262 : 114.0) no description available & (reliability: 388.0) & (original description: Putative TCP19, Description = Transcription factor TCP19, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf05678_324499-327726' '(gnl|cdd|67262 : 117.0) no description available & (at1g67260 : 105.0) Encodes protein with TCP (TB1,CYC,PCF) domain which is likely to be involved in DNA binding and protein-protein interactions. Based on genome analysis, there is a 9-member gene family that possesses this domain in Arabidopsis. Orthologue of Antirrhinum gene CYCLOIDEA.; TCP1; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development; LOCATED IN: cellular_component unknown; EXPRESSED IN: floral meristem; EXPRESSED DURING: 1 floral meristem visible, 2 floral meristem notched; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP domain protein 12 (TAIR:AT1G68800.1); Has 1627 Blast hits to 1627 proteins in 374 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1623; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative cyc2c, Description = CYC/TB1, R domain-containing protein, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf05797_186332-189570' '(gnl|cdd|67262 : 121.0) no description available & (at1g68800 : 104.0) Encodes a TCP transcription factor, closely related to teosinte branched1, arrests axillary bud development and prevents axillary bud outgrowth. Transcription level and mutant phenotype are weaker than its homolog BRC1 (At3G18550).; TCP domain protein 12 (TCP12); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G67260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative BRC1, Description = BRANCHED1A isoform 1, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf07060_453350-456609' '(at3g15030 : 245.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 120.0) no description available & (reliability: 490.0) & (original description: Putative BRC1, Description = Transcription factor PCF8, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf07611_232296-235546' '(gnl|cdd|67262 : 112.0) no description available & (at1g67260 : 91.7) Encodes protein with TCP (TB1,CYC,PCF) domain which is likely to be involved in DNA binding and protein-protein interactions. Based on genome analysis, there is a 9-member gene family that possesses this domain in Arabidopsis. Orthologue of Antirrhinum gene CYCLOIDEA.; TCP1; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development; LOCATED IN: cellular_component unknown; EXPRESSED IN: floral meristem; EXPRESSED DURING: 1 floral meristem visible, 2 floral meristem notched; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP domain protein 12 (TAIR:AT1G68800.1); Has 1627 Blast hits to 1627 proteins in 374 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1623; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative cyc2c, Description = BRANCHED1A isoform 1, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf07829_542568-547599' '(at3g47620 : 122.0) Encodes a transcription factor AtTCP14 that regulates seed germination. AtTCP14 shows elevated expression level just prior to germination. AtTCP14 is predominantly expressed in the vascular tissue of the embryo, and affects gene expression in radicles in a non-cell-autonomous manner.; "TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14" (TCP14); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G58100.1); Has 1158 Blast hits to 1082 proteins in 149 species: Archae - 2; Bacteria - 69; Metazoa - 397; Fungi - 50; Plants - 507; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|67262 : 112.0) no description available & (reliability: 242.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf07883_706532-709461' '(at3g15030 : 140.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 112.0) no description available & (reliability: 280.0) & (original description: Putative cyc2c, Description = Transcription factor PCF8, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf08142_389332-392600' '(at3g15030 : 234.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 117.0) no description available & (reliability: 468.0) & (original description: Putative TCP4, Description = Transcription factor TCP4, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf08621_170310-173494' '(at1g35560 : 173.0) TCP family transcription factor ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G72010.1); Has 382 Blast hits to 382 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 2; Plants - 349; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|67262 : 106.0) no description available & (reliability: 346.0) & (original description: Putative TCP23, Description = Transcription factor TCP23, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf08755_135001-150980' '(at3g27010 : 177.0) Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1;1. Involved in regulation of expression of cell cycle control and ribosomal protein genes.; "TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20" (TCP20); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT5G41030.1); Has 543 Blast hits to 539 proteins in 120 species: Archae - 0; Bacteria - 15; Metazoa - 2; Fungi - 0; Plants - 525; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|67262 : 104.0) no description available & (reliability: 354.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf10122_256571-259137' '(at3g27010 : 171.0) Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1;1. Involved in regulation of expression of cell cycle control and ribosomal protein genes.; "TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20" (TCP20); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT5G41030.1); Has 543 Blast hits to 539 proteins in 120 species: Archae - 0; Bacteria - 15; Metazoa - 2; Fungi - 0; Plants - 525; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|67262 : 109.0) no description available & (reliability: 342.0) & (original description: Putative tic, Description = TCP family transcription factor, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf12470_280521-283609' '(at3g15030 : 119.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 103.0) no description available & (reliability: 238.0) & (original description: Putative BRC1, Description = Transcription factor PCF8, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf12994_223825-226947' '(gnl|cdd|67262 : 108.0) no description available & (at3g18550 : 94.7) Encodes a TCP transcription factor, closely related to teosinte branched1, arrests axillary bud development and prevents axillary bud outgrowth.; BRANCHED 1 (BRC1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of secondary shoot formation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: axillary bud, axillary bud meristem; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP domain protein 12 (TAIR:AT1G68800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative cyc2c, Description = CYC/TB1, R domain-containing protein, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf13540_9655-13065' '(at3g15030 : 223.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 119.0) no description available & (reliability: 446.0) & (original description: Putative TCP4, Description = Transcription factor TCP4, PFAM = PF03634)' T '27.3.29' 'RNA.regulation of transcription.TCP transcription factor family' 'niben101scf18102_13367-16296' '(at3g15030 : 154.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 116.0) no description available & (reliability: 308.0) & (original description: Putative cyc2c, Description = Transcription factor PCF8, PFAM = PF03634)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.3scaffold21806_27144-30280' '(at3g14180 : 181.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: 6B-interacting protein 1-like 1 (TAIR:AT1G54060.1); Has 515 Blast hits to 439 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 2; Plants - 432; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|39483 : 137.0) no description available & (reliability: 362.0) & (original description: Putative ASIL1, Description = Trihelix transcription factor ASIL1, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.3scaffold44268_6766-9767' '(at2g44730 : 182.0) Alcohol dehydrogenase transcription factor Myb/SANT-like family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MADF domain (InterPro:IPR006578), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24860.1); Has 587 Blast hits to 557 proteins in 72 species: Archae - 0; Bacteria - 33; Metazoa - 106; Fungi - 10; Plants - 386; Viruses - 8; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|39483 : 98.3) no description available & (reliability: 364.0) & (original description: Putative BnaC03g24920D, Description = BnaC03g24920D protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.3scaffold47389_5315-16180' '(at1g13450 : 436.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G25990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39483 : 107.0) no description available & (reliability: 872.0) & (original description: Putative GT-1, Description = Trihelix transcription factor GT-1, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.3scaffold58612_2404-6963' '(at1g76890 : 306.0) encodes a plant trihelix DNA-binding protein; GT2; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G76880.1); Has 2646 Blast hits to 1586 proteins in 181 species: Archae - 0; Bacteria - 36; Metazoa - 813; Fungi - 181; Plants - 797; Viruses - 41; Other Eukaryotes - 778 (source: NCBI BLink). & (gnl|cdd|39483 : 161.0) no description available & (reliability: 612.0) & (original description: Putative GT2, Description = SANT DNA-binding domain-containing protein, PFAM = PF13837;PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.3scaffold84027_1-4451' '(at2g35640 : 194.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G31310.1); Has 705 Blast hits to 695 proteins in 85 species: Archae - 0; Bacteria - 25; Metazoa - 102; Fungi - 42; Plants - 506; Viruses - 2; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative sh4, Description = Putative shattering protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.5scaffold65_985500-997098' '(at1g13450 : 437.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G25990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39483 : 106.0) no description available & (reliability: 874.0) & (original description: Putative GT-1, Description = Trihelix transcription factor GT-1, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.5scaffold569_516177-520031' '(at1g76880 : 211.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G76890.2); Has 4096 Blast hits to 3293 proteins in 319 species: Archae - 0; Bacteria - 232; Metazoa - 1014; Fungi - 378; Plants - 799; Viruses - 55; Other Eukaryotes - 1618 (source: NCBI BLink). & (gnl|cdd|39483 : 128.0) no description available & (reliability: 422.0) & (original description: Putative DF1, Description = Trihelix transcription factor GT-2, PFAM = PF13837;PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.5scaffold2701_164585-170642' '(at3g58630 : 206.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G11100.1); Has 367 Blast hits to 356 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 4; Plants - 342; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|39483 : 131.0) no description available & (reliability: 412.0) & (original description: Putative NtSIP1, Description = 6b-interacting protein 1, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.5scaffold2854_67747-73379' '(at5g03680 : 179.0) Recessive mutations are defective in organ initiation and orientation in the second whorl. This gene encodes a trihelix transcription factor whose expression is limited to margins of floral and vegetative organs. Overexpression and double mutant analyses suggest that this gene is involved in limiting lateral growth of organs.; PETAL LOSS (PTL); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G10000.1); Has 1269 Blast hits to 922 proteins in 144 species: Archae - 0; Bacteria - 109; Metazoa - 238; Fungi - 32; Plants - 703; Viruses - 29; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|39483 : 158.0) no description available & (reliability: 358.0) & (original description: Putative PTL, Description = Trihelix transcription factor PTL, PFAM = PF13837;PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.5scaffold3090_271653-275071' '(at3g10040 : 254.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76870.1); Has 3136 Blast hits to 1955 proteins in 249 species: Archae - 4; Bacteria - 147; Metazoa - 846; Fungi - 267; Plants - 330; Viruses - 57; Other Eukaryotes - 1485 (source: NCBI BLink). & (reliability: 508.0) & (original description: Putative SHOOT2, Description = Putative uncharacterized protein SHOOT2, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.5scaffold5239_95392-103372' '(at4g17050 : 448.0) Encodes a protein with ureidoglycine aminohydrolase activity.; ureidoglycine aminohydrolase (UGLYAH); FUNCTIONS IN: ureidoglycine aminohydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: allantoin catabolic process, regulation of transcription; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cupin 2, conserved barrel (InterPro:IPR013096), Cupin, RmlC-type (InterPro:IPR011051), RmlC-like jelly roll fold (InterPro:IPR014710); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|83763 : 229.0) no description available & (reliability: 896.0) & (original description: Putative GIP1, Description = Ureidoglycine aminohydrolase, PFAM = )' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.5scaffold5295_22711-26438' '(at2g35640 : 160.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G31310.1); Has 705 Blast hits to 695 proteins in 85 species: Archae - 0; Bacteria - 25; Metazoa - 102; Fungi - 42; Plants - 506; Viruses - 2; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative sh4, Description = Putative shattering protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.5scaffold5456_3171-10281' '(at3g58630 : 128.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G11100.1); Has 367 Blast hits to 356 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 4; Plants - 342; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|39483 : 119.0) no description available & (reliability: 256.0) & (original description: Putative TH18, Description = Trihelix protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.5scaffold8077_29-8426' '(at3g01560 : 203.0) CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein of unknown function DUF1421 (InterPro:IPR010820), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1421) (TAIR:AT5G14540.1); Has 90069 Blast hits to 50370 proteins in 2078 species: Archae - 118; Bacteria - 11979; Metazoa - 33430; Fungi - 17845; Plants - 12302; Viruses - 1904; Other Eukaryotes - 12491 (source: NCBI BLink). & (gnl|cdd|70679 : 124.0) no description available & (reliability: 406.0) & (original description: Putative F4P13.11, Description = F4P13.11 protein, PFAM = PF07223)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'nbv0.5scaffold8904_27654-29949' '(at1g21200 : 202.0) sequence-specific DNA binding transcription factors; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76870.1); Has 317 Blast hits to 297 proteins in 56 species: Archae - 2; Bacteria - 28; Metazoa - 67; Fungi - 2; Plants - 135; Viruses - 9; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative SHOOT2, Description = Putative uncharacterized protein SHOOT2, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben044scf00000277ctg003_113-3227' '(at3g24860 : 97.4) Homeodomain-like superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Alcohol dehydrogenase transcription factor Myb/SANT-like family protein (TAIR:AT2G44730.1); Has 901 Blast hits to 752 proteins in 148 species: Archae - 0; Bacteria - 32; Metazoa - 105; Fungi - 44; Plants - 531; Viruses - 61; Other Eukaryotes - 128 (source: NCBI BLink). & (reliability: 194.8) & (original description: Putative At2g44730, Description = Myb/SANT-like DNA-binding domain protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben044scf00000455ctg001_812-3606' '(at3g58630 : 189.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G11100.1); Has 367 Blast hits to 356 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 4; Plants - 342; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|39483 : 121.0) no description available & (reliability: 378.0) & (original description: Putative NtSIP1, Description = 6b-interacting protein 1, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben044scf00006241ctg008_1-2526' '(at2g44730 : 110.0) Alcohol dehydrogenase transcription factor Myb/SANT-like family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MADF domain (InterPro:IPR006578), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24860.1); Has 587 Blast hits to 557 proteins in 72 species: Archae - 0; Bacteria - 33; Metazoa - 106; Fungi - 10; Plants - 386; Viruses - 8; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative PGSC0003DMG400020508, Description = BnaC03g24920D protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben044scf00008750ctg005_1206-4699' '(at5g47660 : 160.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MADF domain (InterPro:IPR006578), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G28300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative glysoja_015156, Description = Trihelix transcription factor GT-2, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben044scf00008848ctg026_1-4604' '(at5g14540 : 153.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UBA-like (InterPro:IPR009060), Protein of unknown function DUF1421 (InterPro:IPR010820); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1421) (TAIR:AT3G01560.1); Has 114087 Blast hits to 62694 proteins in 2427 species: Archae - 138; Bacteria - 16154; Metazoa - 45092; Fungi - 21109; Plants - 14949; Viruses - 2278; Other Eukaryotes - 14367 (source: NCBI BLink). & (gnl|cdd|70679 : 105.0) no description available & (reliability: 306.0) & (original description: Putative MTR_6g004930, Description = DNA-binding protein, putative, PFAM = PF07223)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben044scf00012607ctg003_78-2589' '(at3g24490 : 217.0) Alcohol dehydrogenase transcription factor Myb/SANT-like family protein; CONTAINS InterPro DOMAIN/s: MADF domain (InterPro:IPR006578); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G14180.1); Has 2180 Blast hits to 1768 proteins in 193 species: Archae - 0; Bacteria - 86; Metazoa - 661; Fungi - 121; Plants - 408; Viruses - 35; Other Eukaryotes - 869 (source: NCBI BLink). & (gnl|cdd|39483 : 84.1) no description available & (reliability: 434.0) & (original description: Putative At3g24490, Description = Alcohol dehydrogenase transcription factor myb/SANT-like protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben044scf00013434ctg024_6434-9526' '(at1g21200 : 181.0) sequence-specific DNA binding transcription factors; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76870.1); Has 317 Blast hits to 297 proteins in 56 species: Archae - 2; Bacteria - 28; Metazoa - 67; Fungi - 2; Plants - 135; Viruses - 9; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative TH9, Description = Sequence-specific DNA binding transcription factor, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben044scf00016882ctg020_1-4653' '(at5g05550 : 146.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G11100.1); Has 359 Blast hits to 349 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 349; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|39483 : 120.0) no description available & (reliability: 292.0) & (original description: Putative TH18, Description = Trihelix protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben044scf00019263ctg003_1-2782' '(at1g76870 : 206.0) BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi - 14; Plants - 127; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 400.0) & (original description: Putative TH9, Description = Trihelix protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben044scf00039552ctg000_1646-6529' '(at1g76890 : 232.0) encodes a plant trihelix DNA-binding protein; GT2; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G76880.1); Has 2646 Blast hits to 1586 proteins in 181 species: Archae - 0; Bacteria - 36; Metazoa - 813; Fungi - 181; Plants - 797; Viruses - 41; Other Eukaryotes - 778 (source: NCBI BLink). & (gnl|cdd|39483 : 155.0) no description available & (reliability: 464.0) & (original description: Putative DF1, Description = Trihelix transcription factor GT-2, PFAM = PF13837;PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben044scf00053492ctg000_1-3526' '(at1g76880 : 124.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G76890.2); Has 4096 Blast hits to 3293 proteins in 319 species: Archae - 0; Bacteria - 232; Metazoa - 1014; Fungi - 378; Plants - 799; Viruses - 55; Other Eukaryotes - 1618 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative ORF54, Description = GT-like trihelix DNA-binding protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf00360_489574-497575' '(at4g31270 : 133.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G33550.1); Has 462 Blast hits to 461 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 2; Plants - 436; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative PGSC0003DMG400029553, Description = , PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf00361_456075-459908' '(at1g76890 : 111.0) encodes a plant trihelix DNA-binding protein; GT2; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G76880.1); Has 2646 Blast hits to 1586 proteins in 181 species: Archae - 0; Bacteria - 36; Metazoa - 813; Fungi - 181; Plants - 797; Viruses - 41; Other Eukaryotes - 778 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative ORF54, Description = GT-like trihelix DNA-binding protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf00417_56316-59597' '(at1g21200 : 171.0) sequence-specific DNA binding transcription factors; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76870.1); Has 317 Blast hits to 297 proteins in 56 species: Archae - 2; Bacteria - 28; Metazoa - 67; Fungi - 2; Plants - 135; Viruses - 9; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative SHOOT2, Description = Putative uncharacterized protein SHOOT2, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf00646_707820-710991' '(at1g76870 : 173.0) BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi - 14; Plants - 127; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative TH9, Description = Sequence-specific DNA binding transcription factor, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf01150_576591-581471' '(at1g76890 : 231.0) encodes a plant trihelix DNA-binding protein; GT2; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G76880.1); Has 2646 Blast hits to 1586 proteins in 181 species: Archae - 0; Bacteria - 36; Metazoa - 813; Fungi - 181; Plants - 797; Viruses - 41; Other Eukaryotes - 778 (source: NCBI BLink). & (gnl|cdd|39483 : 156.0) no description available & (reliability: 462.0) & (original description: Putative DF1, Description = Trihelix transcription factor GT-2, PFAM = PF13837;PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf01247_605207-608408' '(at3g58630 : 189.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G11100.1); Has 367 Blast hits to 356 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 4; Plants - 342; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|39483 : 117.0) no description available & (reliability: 378.0) & (original description: Putative TH18, Description = BnaA07g17950D protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf01448_212336-223198' '(at5g14540 : 191.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UBA-like (InterPro:IPR009060), Protein of unknown function DUF1421 (InterPro:IPR010820); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1421) (TAIR:AT3G01560.1); Has 114087 Blast hits to 62694 proteins in 2427 species: Archae - 138; Bacteria - 16154; Metazoa - 45092; Fungi - 21109; Plants - 14949; Viruses - 2278; Other Eukaryotes - 14367 (source: NCBI BLink). & (gnl|cdd|70679 : 122.0) no description available & (reliability: 382.0) & (original description: Putative F4P13.11, Description = F4P13.11 protein, PFAM = PF07223)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf02085_1567185-1570607' '(at5g01380 : 149.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G38250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39483 : 85.2) no description available & (reliability: 298.0) & (original description: Putative GT1L, Description = Trihelix transcription factor GT-3b, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf02156_793543-797934' '(at2g35640 : 173.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G31310.1); Has 705 Blast hits to 695 proteins in 85 species: Archae - 0; Bacteria - 25; Metazoa - 102; Fungi - 42; Plants - 506; Viruses - 2; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative sh4, Description = Putative shattering protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf02361_693354-698144' '(at1g76880 : 193.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G76890.2); Has 4096 Blast hits to 3293 proteins in 319 species: Archae - 0; Bacteria - 232; Metazoa - 1014; Fungi - 378; Plants - 799; Viruses - 55; Other Eukaryotes - 1618 (source: NCBI BLink). & (gnl|cdd|39483 : 162.0) no description available & (reliability: 386.0) & (original description: Putative BnaC02g23790D, Description = BnaC02g23790D protein, PFAM = PF13837;PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf02407_207164-210165' '(at2g44730 : 179.0) Alcohol dehydrogenase transcription factor Myb/SANT-like family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MADF domain (InterPro:IPR006578), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24860.1); Has 587 Blast hits to 557 proteins in 72 species: Archae - 0; Bacteria - 33; Metazoa - 106; Fungi - 10; Plants - 386; Viruses - 8; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|39483 : 100.0) no description available & (reliability: 358.0) & (original description: Putative BnaC03g24920D, Description = BnaC03g24920D protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf02517_1513973-1523955' '(at3g24490 : 213.0) Alcohol dehydrogenase transcription factor Myb/SANT-like family protein; CONTAINS InterPro DOMAIN/s: MADF domain (InterPro:IPR006578); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G14180.1); Has 2180 Blast hits to 1768 proteins in 193 species: Archae - 0; Bacteria - 86; Metazoa - 661; Fungi - 121; Plants - 408; Viruses - 35; Other Eukaryotes - 869 (source: NCBI BLink). & (gnl|cdd|39483 : 85.6) no description available & (reliability: 426.0) & (original description: Putative At3g24490, Description = Alcohol dehydrogenase transcription factor myb/SANT-like protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf03254_1364170-1368633' '(at5g14540 : 143.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UBA-like (InterPro:IPR009060), Protein of unknown function DUF1421 (InterPro:IPR010820); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1421) (TAIR:AT3G01560.1); Has 114087 Blast hits to 62694 proteins in 2427 species: Archae - 138; Bacteria - 16154; Metazoa - 45092; Fungi - 21109; Plants - 14949; Viruses - 2278; Other Eukaryotes - 14367 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative At5g14540, Description = AT5G14540 protein, PFAM = )' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf03255_420477-423281' '(at5g47660 : 154.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MADF domain (InterPro:IPR006578), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G28300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative glysoja_015156, Description = Trihelix transcription factor GT-2, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf03441_46400-50877' '(at5g05550 : 180.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G11100.1); Has 359 Blast hits to 349 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 349; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|39483 : 123.0) no description available & (reliability: 360.0) & (original description: Putative tf, Description = Putative transcription factor, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf03580_226781-232201' '(at5g03680 : 178.0) Recessive mutations are defective in organ initiation and orientation in the second whorl. This gene encodes a trihelix transcription factor whose expression is limited to margins of floral and vegetative organs. Overexpression and double mutant analyses suggest that this gene is involved in limiting lateral growth of organs.; PETAL LOSS (PTL); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G10000.1); Has 1269 Blast hits to 922 proteins in 144 species: Archae - 0; Bacteria - 109; Metazoa - 238; Fungi - 32; Plants - 703; Viruses - 29; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|39483 : 168.0) no description available & (reliability: 356.0) & (original description: Putative DF1, Description = Trihelix transcription factor GT-2, PFAM = PF13837;PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf03969_693294-697021' '(at2g35640 : 155.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G31310.1); Has 705 Blast hits to 695 proteins in 85 species: Archae - 0; Bacteria - 25; Metazoa - 102; Fungi - 42; Plants - 506; Viruses - 2; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative sh4, Description = BnaA09g25270D protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf04140_92969-97859' '(at1g21200 : 182.0) sequence-specific DNA binding transcription factors; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76870.1); Has 317 Blast hits to 297 proteins in 56 species: Archae - 2; Bacteria - 28; Metazoa - 67; Fungi - 2; Plants - 135; Viruses - 9; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative BnaA08g21420D, Description = BnaA08g21420D protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf04456_121300-124475' '(at3g24490 : 196.0) Alcohol dehydrogenase transcription factor Myb/SANT-like family protein; CONTAINS InterPro DOMAIN/s: MADF domain (InterPro:IPR006578); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G14180.1); Has 2180 Blast hits to 1768 proteins in 193 species: Archae - 0; Bacteria - 86; Metazoa - 661; Fungi - 121; Plants - 408; Viruses - 35; Other Eukaryotes - 869 (source: NCBI BLink). & (gnl|cdd|39483 : 89.5) no description available & (reliability: 392.0) & (original description: Putative At3g24490, Description = Alcohol dehydrogenase transcription factor myb/SANT-like protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf04731_343089-346913' '(at1g76880 : 209.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G76890.2); Has 4096 Blast hits to 3293 proteins in 319 species: Archae - 0; Bacteria - 232; Metazoa - 1014; Fungi - 378; Plants - 799; Viruses - 55; Other Eukaryotes - 1618 (source: NCBI BLink). & (gnl|cdd|39483 : 130.0) no description available & (reliability: 418.0) & (original description: Putative DF1, Description = Duplicated homeodomain-like superfamily protein, putative, PFAM = PF13837;PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf04905_708710-721258' '(at1g13450 : 437.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G25990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39483 : 108.0) no description available & (reliability: 874.0) & (original description: Putative GT-4, Description = Trihelix transcription factor GT-4, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf05357_120784-128856' '(at5g05550 : 180.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G11100.1); Has 359 Blast hits to 349 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 349; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|39483 : 116.0) no description available & (reliability: 360.0) & (original description: Putative tf, Description = Trihelix protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf05374_408989-413030' '(at5g47660 : 144.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MADF domain (InterPro:IPR006578), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G28300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative Ccrd_001209, Description = Homeodomain-like protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf05469_304615-309368' '(at3g58630 : 125.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G11100.1); Has 367 Blast hits to 356 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 4; Plants - 342; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|39483 : 116.0) no description available & (reliability: 250.0) & (original description: Putative TH18, Description = Trihelix protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf05956_67841-70890' '(at2g44730 : 121.0) Alcohol dehydrogenase transcription factor Myb/SANT-like family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MADF domain (InterPro:IPR006578), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24860.1); Has 587 Blast hits to 557 proteins in 72 species: Archae - 0; Bacteria - 33; Metazoa - 106; Fungi - 10; Plants - 386; Viruses - 8; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative PGSC0003DMG400020508, Description = BnaC03g24920D protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf06087_607375-611229' '(at1g76880 : 212.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G76890.2); Has 4096 Blast hits to 3293 proteins in 319 species: Archae - 0; Bacteria - 232; Metazoa - 1014; Fungi - 378; Plants - 799; Viruses - 55; Other Eukaryotes - 1618 (source: NCBI BLink). & (gnl|cdd|39483 : 128.0) no description available & (reliability: 424.0) & (original description: Putative BnaC02g23790D, Description = BnaC02g23790D protein, PFAM = PF13837;PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf06869_360985-365544' '(at1g76880 : 225.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G76890.2); Has 4096 Blast hits to 3293 proteins in 319 species: Archae - 0; Bacteria - 232; Metazoa - 1014; Fungi - 378; Plants - 799; Viruses - 55; Other Eukaryotes - 1618 (source: NCBI BLink). & (gnl|cdd|39483 : 164.0) no description available & (reliability: 450.0) & (original description: Putative GT2, Description = SANT DNA-binding domain-containing protein, PFAM = PF13837;PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf07054_462552-479005' '(at5g01380 : 110.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G38250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39483 : 81.8) no description available & (reliability: 220.0) & (original description: Putative TF2, Description = Transcription factor TF2, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf07115_142953-153017' '(at1g76870 : 189.0) BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi - 14; Plants - 127; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative TH9, Description = Tubby-like F-box protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf08242_229423-232421' '(at2g44730 : 183.0) Alcohol dehydrogenase transcription factor Myb/SANT-like family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MADF domain (InterPro:IPR006578), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24860.1); Has 587 Blast hits to 557 proteins in 72 species: Archae - 0; Bacteria - 33; Metazoa - 106; Fungi - 10; Plants - 386; Viruses - 8; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|39483 : 102.0) no description available & (reliability: 366.0) & (original description: Putative BnaC03g24920D, Description = BnaC03g24920D protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf08772_128359-134270' '(at5g14540 : 150.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UBA-like (InterPro:IPR009060), Protein of unknown function DUF1421 (InterPro:IPR010820); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1421) (TAIR:AT3G01560.1); Has 114087 Blast hits to 62694 proteins in 2427 species: Archae - 138; Bacteria - 16154; Metazoa - 45092; Fungi - 21109; Plants - 14949; Viruses - 2278; Other Eukaryotes - 14367 (source: NCBI BLink). & (gnl|cdd|70679 : 132.0) no description available & (reliability: 300.0) & (original description: Putative At3g01560, Description = AT5G14540 protein, PFAM = PF07223)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf09109_114439-117467' '(at3g24860 : 104.0) Homeodomain-like superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Alcohol dehydrogenase transcription factor Myb/SANT-like family protein (TAIR:AT2G44730.1); Has 901 Blast hits to 752 proteins in 148 species: Archae - 0; Bacteria - 32; Metazoa - 105; Fungi - 44; Plants - 531; Viruses - 61; Other Eukaryotes - 128 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative , Description = Myb/SANT-like DNA-binding domain protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf12127_2543-5886' '(at3g10040 : 210.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76870.1); Has 3136 Blast hits to 1955 proteins in 249 species: Archae - 4; Bacteria - 147; Metazoa - 846; Fungi - 267; Plants - 330; Viruses - 57; Other Eukaryotes - 1485 (source: NCBI BLink). & (reliability: 420.0) & (original description: Putative TH9, Description = Tubby-like F-box protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf12405_154392-157645' '(at1g21200 : 379.0) sequence-specific DNA binding transcription factors; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76870.1); Has 317 Blast hits to 297 proteins in 56 species: Archae - 2; Bacteria - 28; Metazoa - 67; Fungi - 2; Plants - 135; Viruses - 9; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 758.0) & (original description: Putative TH9, Description = Trihelix protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf12959_25615-28879' '(at5g01380 : 165.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G38250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39483 : 102.0) no description available & (reliability: 330.0) & (original description: Putative GT1L, Description = Trihelix transcription factor GT-3b, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf13146_34202-37790' '(at3g10040 : 246.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76870.1); Has 3136 Blast hits to 1955 proteins in 249 species: Archae - 4; Bacteria - 147; Metazoa - 846; Fungi - 267; Plants - 330; Viruses - 57; Other Eukaryotes - 1485 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative At3g10040, Description = Putative uncharacterized protein At3g10040, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf15538_110386-117659' '(at4g17050 : 459.0) Encodes a protein with ureidoglycine aminohydrolase activity.; ureidoglycine aminohydrolase (UGLYAH); FUNCTIONS IN: ureidoglycine aminohydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: allantoin catabolic process, regulation of transcription; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cupin 2, conserved barrel (InterPro:IPR013096), Cupin, RmlC-type (InterPro:IPR011051), RmlC-like jelly roll fold (InterPro:IPR014710); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|83763 : 229.0) no description available & (reliability: 918.0) & (original description: Putative UGLYAH, Description = (S)-ureidoglycine aminohydrolase, PFAM = )' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf17872_138762-147790' '(at3g58630 : 126.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G11100.1); Has 367 Blast hits to 356 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 4; Plants - 342; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|39483 : 119.0) no description available & (reliability: 252.0) & (original description: Putative TH18, Description = Trihelix protein, PFAM = PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf31474_41709-47341' '(at5g03680 : 179.0) Recessive mutations are defective in organ initiation and orientation in the second whorl. This gene encodes a trihelix transcription factor whose expression is limited to margins of floral and vegetative organs. Overexpression and double mutant analyses suggest that this gene is involved in limiting lateral growth of organs.; PETAL LOSS (PTL); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G10000.1); Has 1269 Blast hits to 922 proteins in 144 species: Archae - 0; Bacteria - 109; Metazoa - 238; Fungi - 32; Plants - 703; Viruses - 29; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|39483 : 166.0) no description available & (reliability: 358.0) & (original description: Putative DF1, Description = Trihelix transcription factor GT-2, PFAM = PF13837;PF13837)' T '27.3.30' 'RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family' 'niben101scf37331_6639-12580' '(at3g54390 : 189.0) sequence-specific DNA binding transcription factors; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: aspartate/glutamate/uridylate kinase family protein (TAIR:AT3G10030.1); Has 350 Blast hits to 341 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 2; Plants - 343; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|39483 : 106.0) no description available & (reliability: 378.0) & (original description: Putative T12E18_80, Description = At3g54390, PFAM = PF13837)' T '27.3.31' 'RNA.regulation of transcription.TUB transcription factor family' 'niben101scf04218_45247-51364' '(at1g16070 : 390.0) Member of TLP family; tubby like protein 8 (TLP8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 6 (TAIR:AT1G47270.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37713 : 216.0) no description available & (gnl|cdd|85281 : 105.0) no description available & (reliability: 780.0) & (original description: Putative TULP4, Description = AtTLP8, PFAM = PF01167)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold584_68518-74191' '(at1g30650 : 248.0) member of WRKY Transcription Factor; Group II-e; WRKY DNA-binding protein 14 (WRKY14); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group Iie (InterPro:IPR017412); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 35 (TAIR:AT2G34830.1); Has 3350 Blast hits to 2895 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 12; Plants - 3273; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (gnl|cdd|66760 : 109.0) no description available & (reliability: 496.0) & (original description: Putative WRKY14, Description = Probable WRKY transcription factor 14, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold3868_61946-66176' '(at4g26640 : 142.0) member of WRKY Transcription Factor; Group I; WRKY20; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 2 (TAIR:AT5G56270.1); Has 5750 Blast hits to 3121 proteins in 204 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 10; Plants - 5662; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|66760 : 97.2) no description available & (reliability: 284.0) & (original description: Putative WRK, Description = WRKY protein, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold10974_38248-46100' '(gnl|cdd|66760 : 100.0) no description available & (at2g34830 : 82.0) member of WRKY Transcription Factor; Group II-e; WRKY DNA-binding protein 35 (WRKY35); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group Iie (InterPro:IPR017412); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 14 (TAIR:AT1G30650.1); Has 5047 Blast hits to 3028 proteins in 237 species: Archae - 0; Bacteria - 12; Metazoa - 64; Fungi - 63; Plants - 3289; Viruses - 0; Other Eukaryotes - 1619 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative WRKY48, Description = WRKY protein, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold13670_3904-7906' '(at4g39410 : 85.5) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 13 (WRKY13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT2G44745.1); Has 3526 Blast hits to 3073 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 3490; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative WRKY19, Description = WRKY protein, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold18481_1346-6603' '(at4g31805 : 85.5) WRKY family transcription factor; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT5G10890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative PGSC0003DMG400021201, Description = Putative uncharacterized protein Sb04g035860, PFAM = )' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold19118_4216-7442' '(at4g11070 : 184.0) member of WRKY Transcription Factor; Group III; WRKY41; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1); Has 3140 Blast hits to 2706 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3129; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66760 : 102.0) no description available & (reliability: 368.0) & (original description: Putative WRKY1, Description = WRKY family transcription factor, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold21109_11279-15458' '(at5g15130 : 170.0) member of WRKY Transcription Factor; Group II-b; contribute to basal immunity.; WRKY DNA-binding protein 72 (WRKY72); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 61 (TAIR:AT1G18860.1); Has 6758 Blast hits to 4151 proteins in 378 species: Archae - 0; Bacteria - 669; Metazoa - 395; Fungi - 387; Plants - 3478; Viruses - 9; Other Eukaryotes - 1820 (source: NCBI BLink). & (gnl|cdd|66760 : 100.0) no description available & (reliability: 340.0) & (original description: Putative WRKY37, Description = WRKY transcription factor 37, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold23176_7276-10633' '(at2g23320 : 187.0) Encodes WRKY DNA-binding protein 15 (WRKY15).; WRKY DNA-binding protein 15 (WRKY15); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 11 (TAIR:AT4G31550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66760 : 107.0) no description available & (reliability: 374.0) & (original description: Putative WRKY15, Description = Probable WRKY transcription factor 15, PFAM = PF03106;PF10533)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold28905_1-3704' '(at3g56400 : 126.0) member of WRKY Transcription Factor; Group III. Function as activator of SA-dependent defense genes and a repressor of JA-regulated genes. WRKY70-controlled suppression of JA-signaling is partly executed by NPR1.; WRKY DNA-binding protein 70 (WRKY70); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 54 (TAIR:AT2G40750.1); Has 3203 Blast hits to 2772 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3190; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative WRKY3, Description = DNA-binding protein 3, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold35779_4280-7970' '(at1g29860 : 164.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 71 (WRKY71); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group IIc (InterPro:IPR017396); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 28 (TAIR:AT4G18170.1); Has 3523 Blast hits to 3068 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3507; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|66760 : 115.0) no description available & (reliability: 328.0) & (original description: Putative WRKY74, Description = WRKY transcription factor 74, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold44665_312-9047' '(at4g26640 : 370.0) member of WRKY Transcription Factor; Group I; WRKY20; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 2 (TAIR:AT5G56270.1); Has 5750 Blast hits to 3121 proteins in 204 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 10; Plants - 5662; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|66760 : 122.0) no description available & (reliability: 740.0) & (original description: Putative tcw12, Description = WRKY protein, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold50344_5921-10023' '(at2g30590 : 305.0) Encodes WRKY DNA-binding protein 21 (WRKY21).; WRKY DNA-binding protein 21 (WRKY21); FUNCTIONS IN: calmodulin binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 74 (TAIR:AT5G28650.1); Has 39192 Blast hits to 15053 proteins in 688 species: Archae - 6; Bacteria - 1092; Metazoa - 13773; Fungi - 4123; Plants - 4597; Viruses - 447; Other Eukaryotes - 15154 (source: NCBI BLink). & (gnl|cdd|66760 : 108.0) no description available & (reliability: 610.0) & (original description: Putative WRKY21, Description = Probable WRKY transcription factor 21, PFAM = PF03106;PF10533)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold50751_10510-13893' '(at5g49520 : 145.0) Encodes WRKY48, a member of the WRKY Transcription Factor. WRKY48 is a stress- and pathogen-induced transcriptional activator that represses plant basal defense.; WRKY DNA-binding protein 48 (WRKY48); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 23 (TAIR:AT2G47260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 113.0) no description available & (reliability: 290.0) & (original description: Putative WRKY23, Description = WRKY transcription factor 23, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold51685_3483-7642' '(at1g80840 : 227.0) Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.; WRKY DNA-binding protein 40 (WRKY40); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 18 (TAIR:AT4G31800.2); Has 3306 Blast hits to 2859 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3292; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|66760 : 102.0) no description available & (reliability: 454.0) & (original description: Putative wizz, Description = WIZZ, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold53679_8739-12060' '(at4g31550 : 269.0) member of WRKY Transcription Factor; Group II-d; negative regulator of basal resistance to Pseudomonas syringae.; WRKY DNA-binding protein 11 (WRKY11); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 17 (TAIR:AT2G24570.1); Has 3338 Blast hits to 2891 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3320; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|66760 : 105.0) no description available & (reliability: 538.0) & (original description: Putative WRKY11, Description = Probable WRKY transcription factor 11, PFAM = PF03106;PF10533)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold54582_2374-8408' '(at2g44745 : 164.0) WRKY family transcription factor; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 13 (TAIR:AT4G39410.1); Has 3506 Blast hits to 3049 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3483; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|66760 : 101.0) no description available & (reliability: 328.0) & (original description: Putative WRKY14, Description = WRKY transcription factor 14, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold55634_7380-10695' '(at4g24240 : 231.0) Encodes a Ca-dependent calmodulin binding protein. Sequence similarity to the WRKY transcription factor gene family.; WRKY DNA-binding protein 7 (WRKY7); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 11 (TAIR:AT4G31550.1); Has 3521 Blast hits to 3002 proteins in 204 species: Archae - 0; Bacteria - 2; Metazoa - 39; Fungi - 4; Plants - 3353; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|66760 : 107.0) no description available & (reliability: 462.0) & (original description: Putative WRKY7, Description = Probable WRKY transcription factor 7, PFAM = PF10533;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold61242_7250-10885' '(at3g56400 : 136.0) member of WRKY Transcription Factor; Group III. Function as activator of SA-dependent defense genes and a repressor of JA-regulated genes. WRKY70-controlled suppression of JA-signaling is partly executed by NPR1.; WRKY DNA-binding protein 70 (WRKY70); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 54 (TAIR:AT2G40750.1); Has 3203 Blast hits to 2772 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3190; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|66760 : 81.1) no description available & (reliability: 272.0) & (original description: Putative WRKY3, Description = WRKY3, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold66595_4075-8609' '(at1g62300 : 360.0) Encodes a transcription factor WRKY6. Regulates Phosphate1 (Pho1) expression in response to low phosphate (Pi) stress.; WRKY6; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G04450.1); Has 3824 Blast hits to 3363 proteins in 295 species: Archae - 0; Bacteria - 33; Metazoa - 119; Fungi - 43; Plants - 3509; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|66760 : 112.0) no description available & (reliability: 720.0) & (original description: Putative WRKY6, Description = WRKY transcription factor 6, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold72025_2640-5860' '(at1g29280 : 193.0) member of WRKY Transcription Factor; Group II-e; WRKY DNA-binding protein 65 (WRKY65); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 69 (TAIR:AT3G58710.1); Has 3604 Blast hits to 3142 proteins in 247 species: Archae - 4; Bacteria - 64; Metazoa - 46; Fungi - 24; Plants - 3284; Viruses - 4; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|66760 : 105.0) no description available & (reliability: 386.0) & (original description: Putative WRKY65, Description = Probable WRKY transcription factor 65, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold74241_1249-5508' '(at4g01250 : 187.0) member of WRKY Transcription Factor; Group II-e; WRKY22; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23550.1); Has 3274 Blast hits to 2836 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 3256; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|66760 : 107.0) no description available & (reliability: 374.0) & (original description: Putative WRKY22, Description = WRKY transcription factor 22, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold78562_650-7452' '(at5g56270 : 280.0) WRKY transcription factor 2; WRKY DNA-binding protein 2 (WRKY2); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 34 (TAIR:AT4G26440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 118.0) no description available & (reliability: 560.0) & (original description: Putative WRKY05, Description = WRKY transcription factor 05, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold86340_1234-6019' '(at1g62300 : 316.0) Encodes a transcription factor WRKY6. Regulates Phosphate1 (Pho1) expression in response to low phosphate (Pi) stress.; WRKY6; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G04450.1); Has 3824 Blast hits to 3363 proteins in 295 species: Archae - 0; Bacteria - 33; Metazoa - 119; Fungi - 43; Plants - 3509; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|66760 : 110.0) no description available & (reliability: 632.0) & (original description: Putative WRKY42, Description = WRKY transcription factor 42, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold90789_1-5311' '(at1g64000 : 170.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 56 (WRKY56); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 24 (TAIR:AT5G41570.1); Has 3510 Blast hits to 3053 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3491; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|66760 : 109.0) no description available & (reliability: 340.0) & (original description: Putative WRKY43, Description = Probable WRKY transcription factor 43, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold93598_1-4802' '(at1g30650 : 246.0) member of WRKY Transcription Factor; Group II-e; WRKY DNA-binding protein 14 (WRKY14); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group Iie (InterPro:IPR017412); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 35 (TAIR:AT2G34830.1); Has 3350 Blast hits to 2895 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 12; Plants - 3273; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (gnl|cdd|66760 : 109.0) no description available & (reliability: 492.0) & (original description: Putative WRKY14, Description = Probable WRKY transcription factor 14, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.3scaffold97597_1-4343' '(at4g22070 : 321.0) member of WRKY Transcription Factor; Group II-b; WRKY DNA-binding protein 31 (WRKY31); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G04450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66760 : 111.0) no description available & (reliability: 642.0) & (original description: Putative WRKY1, Description = WRKY transcription factor 6, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold11_1981211-1985459' '(at2g30590 : 261.0) Encodes WRKY DNA-binding protein 21 (WRKY21).; WRKY DNA-binding protein 21 (WRKY21); FUNCTIONS IN: calmodulin binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 74 (TAIR:AT5G28650.1); Has 39192 Blast hits to 15053 proteins in 688 species: Archae - 6; Bacteria - 1092; Metazoa - 13773; Fungi - 4123; Plants - 4597; Viruses - 447; Other Eukaryotes - 15154 (source: NCBI BLink). & (gnl|cdd|66760 : 105.0) no description available & (reliability: 522.0) & (original description: Putative WRKY21, Description = Probable WRKY transcription factor 21, PFAM = PF10533;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold51_20250-24784' '(at1g62300 : 350.0) Encodes a transcription factor WRKY6. Regulates Phosphate1 (Pho1) expression in response to low phosphate (Pi) stress.; WRKY6; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G04450.1); Has 3824 Blast hits to 3363 proteins in 295 species: Archae - 0; Bacteria - 33; Metazoa - 119; Fungi - 43; Plants - 3509; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|66760 : 113.0) no description available & (reliability: 700.0) & (original description: Putative WRKY45, Description = WRKY transcription factor 45, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold111_93697-121613' '(at4g01250 : 172.0) member of WRKY Transcription Factor; Group II-e; WRKY22; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23550.1); Has 3274 Blast hits to 2836 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 3256; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|66760 : 107.0) no description available & (reliability: 344.0) & (original description: Putative WRKY18, Description = WRKY protein, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold482_216527-221814' '(at4g26640 : 328.0) member of WRKY Transcription Factor; Group I; WRKY20; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 2 (TAIR:AT5G56270.1); Has 5750 Blast hits to 3121 proteins in 204 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 10; Plants - 5662; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|66760 : 117.0) no description available & (reliability: 656.0) & (original description: Putative WRKY9, Description = WRKY9, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold557_4394-11146' '(at2g47260 : 137.0) Encodes a member of WRKY Transcription Factor; Group I. Involved in nematode feeding site establishment.; WRKY DNA-binding protein 23 (WRKY23); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group IIc (InterPro:IPR017396); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT3G62340.1); Has 3541 Blast hits to 3088 proteins in 202 species: Archae - 0; Bacteria - 3; Metazoa - 11; Fungi - 7; Plants - 3503; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|66760 : 113.0) no description available & (reliability: 274.0) & (original description: Putative WRKY1, Description = Transcription factor CaWRKY1, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold645_101233-104548' '(at4g24240 : 214.0) Encodes a Ca-dependent calmodulin binding protein. Sequence similarity to the WRKY transcription factor gene family.; WRKY DNA-binding protein 7 (WRKY7); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 11 (TAIR:AT4G31550.1); Has 3521 Blast hits to 3002 proteins in 204 species: Archae - 0; Bacteria - 2; Metazoa - 39; Fungi - 4; Plants - 3353; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|66760 : 107.0) no description available & (reliability: 428.0) & (original description: Putative WRKY7, Description = Probable WRKY transcription factor 7, PFAM = PF03106;PF10533)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold667_478778-488088' '(at5g56270 : 270.0) WRKY transcription factor 2; WRKY DNA-binding protein 2 (WRKY2); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 34 (TAIR:AT4G26440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 118.0) no description available & (reliability: 540.0) & (original description: Putative WRKY06, Description = WRKY transcription factor 06, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold726_445072-448455' '(at5g49520 : 144.0) Encodes WRKY48, a member of the WRKY Transcription Factor. WRKY48 is a stress- and pathogen-induced transcriptional activator that represses plant basal defense.; WRKY DNA-binding protein 48 (WRKY48); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 23 (TAIR:AT2G47260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 112.0) no description available & (reliability: 288.0) & (original description: Putative WRKY5, Description = WRKY5 transcription factor, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold739_283922-294513' '(at4g26640 : 372.0) member of WRKY Transcription Factor; Group I; WRKY20; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 2 (TAIR:AT5G56270.1); Has 5750 Blast hits to 3121 proteins in 204 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 10; Plants - 5662; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|66760 : 121.0) no description available & (reliability: 744.0) & (original description: Putative WRKY9, Description = WRKY9, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold939_528913-535253' '(at2g44745 : 160.0) WRKY family transcription factor; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 13 (TAIR:AT4G39410.1); Has 3506 Blast hits to 3049 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3483; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|66760 : 109.0) no description available & (reliability: 320.0) & (original description: Putative WRKY38, Description = Transcription factor, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold1006_280798-284007' '(at2g44745 : 97.8) WRKY family transcription factor; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 13 (TAIR:AT4G39410.1); Has 3506 Blast hits to 3049 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3483; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative wrky1, Description = WRKY transcription factor, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold1054_348643-352802' '(at1g80840 : 227.0) Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.; WRKY DNA-binding protein 40 (WRKY40); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 18 (TAIR:AT4G31800.2); Has 3306 Blast hits to 2859 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3292; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|66760 : 101.0) no description available & (reliability: 454.0) & (original description: Putative wizz, Description = WIZZ, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold1850_132688-136574' '(at4g39410 : 85.1) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 13 (WRKY13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT2G44745.1); Has 3526 Blast hits to 3073 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 3490; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative WRKY5, Description = WRKY family transcription factor, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold2029_142681-148298' '(at2g44745 : 160.0) WRKY family transcription factor; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 13 (TAIR:AT4G39410.1); Has 3506 Blast hits to 3049 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3483; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|66760 : 110.0) no description available & (reliability: 320.0) & (original description: Putative WRKY12, Description = Probable WRKY transcription factor 12, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold2836_140236-146242' '(at2g47260 : 148.0) Encodes a member of WRKY Transcription Factor; Group I. Involved in nematode feeding site establishment.; WRKY DNA-binding protein 23 (WRKY23); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group IIc (InterPro:IPR017396); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT3G62340.1); Has 3541 Blast hits to 3088 proteins in 202 species: Archae - 0; Bacteria - 3; Metazoa - 11; Fungi - 7; Plants - 3503; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|66760 : 113.0) no description available & (reliability: 296.0) & (original description: Putative WRKY1, Description = WRKY protein, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold3139_1099-5082' '(at1g80840 : 226.0) Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.; WRKY DNA-binding protein 40 (WRKY40); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 18 (TAIR:AT4G31800.2); Has 3306 Blast hits to 2859 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3292; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|66760 : 104.0) no description available & (reliability: 452.0) & (original description: Putative WRKY40, Description = Probable WRKY transcription factor 40, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold3804_15353-119098' '(at1g18860 : 167.0) member of WRKY Transcription Factor; Group II-b; WRKY DNA-binding protein 61 (WRKY61); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 72 (TAIR:AT5G15130.1); Has 5252 Blast hits to 3559 proteins in 289 species: Archae - 0; Bacteria - 31; Metazoa - 146; Fungi - 97; Plants - 3463; Viruses - 1; Other Eukaryotes - 1514 (source: NCBI BLink). & (gnl|cdd|66760 : 103.0) no description available & (reliability: 334.0) & (original description: Putative WRKY22, Description = WRKY protein, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold3922_48821-53893' '(at1g64000 : 171.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 56 (WRKY56); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 24 (TAIR:AT5G41570.1); Has 3510 Blast hits to 3053 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3491; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|66760 : 107.0) no description available & (reliability: 342.0) & (original description: Putative WRKY75, Description = Probable WRKY transcription factor 75, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold4498_108669-111614' '(at4g11070 : 83.2) member of WRKY Transcription Factor; Group III; WRKY41; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1); Has 3140 Blast hits to 2706 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3129; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative WRKY43, Description = WRKY transcription factor, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold4608_56312-60071' '(at5g43290 : 132.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 49 (WRKY49); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 57 (TAIR:AT1G69310.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 103.0) no description available & (reliability: 264.0) & (original description: Putative WRKY38, Description = WRKY transcription factor 38, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold4894_5413-9565' '(at5g15130 : 196.0) member of WRKY Transcription Factor; Group II-b; contribute to basal immunity.; WRKY DNA-binding protein 72 (WRKY72); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 61 (TAIR:AT1G18860.1); Has 6758 Blast hits to 4151 proteins in 378 species: Archae - 0; Bacteria - 669; Metazoa - 395; Fungi - 387; Plants - 3478; Viruses - 9; Other Eukaryotes - 1820 (source: NCBI BLink). & (gnl|cdd|66760 : 101.0) no description available & (reliability: 392.0) & (original description: Putative WRKY59, Description = WRKY protein, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'nbv0.5scaffold6520_32643-35981' '(at3g01970 : 156.0) member of WRKY Transcription Factor; Group I; WRKY DNA-binding protein 45 (WRKY45); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 75 (TAIR:AT5G13080.1); Has 3497 Blast hits to 3049 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3482; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|66760 : 101.0) no description available & (reliability: 312.0) & (original description: Putative WRKY43, Description = Probable WRKY transcription factor 43, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00000894ctg004_5382-9176' '(at2g23320 : 202.0) Encodes WRKY DNA-binding protein 15 (WRKY15).; WRKY DNA-binding protein 15 (WRKY15); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 11 (TAIR:AT4G31550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66760 : 108.0) no description available & (reliability: 404.0) & (original description: Putative WRKY7, Description = Probable WRKY transcription factor 7, PFAM = PF10533;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00003971ctg005_1-4941' '(at4g31805 : 89.7) WRKY family transcription factor; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT5G10890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative PGSC0003DMG400021201, Description = Putative ovule protein, PFAM = )' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00004045ctg013_2355-8057' '(at1g13960 : 339.0) Encodes WRKY DNA-binding protein 4 (WRKY4).; WRKY DNA-binding protein 4 (WRKY4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 3 (TAIR:AT2G03340.1); Has 5891 Blast hits to 3196 proteins in 226 species: Archae - 0; Bacteria - 0; Metazoa - 44; Fungi - 6; Plants - 5778; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|66760 : 120.0) no description available & (reliability: 678.0) & (original description: Putative WRKY4, Description = Probable WRKY transcription factor 4, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00005026ctg028_1-4056' '(at1g18860 : 168.0) member of WRKY Transcription Factor; Group II-b; WRKY DNA-binding protein 61 (WRKY61); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 72 (TAIR:AT5G15130.1); Has 5252 Blast hits to 3559 proteins in 289 species: Archae - 0; Bacteria - 31; Metazoa - 146; Fungi - 97; Plants - 3463; Viruses - 1; Other Eukaryotes - 1514 (source: NCBI BLink). & (gnl|cdd|66760 : 103.0) no description available & (reliability: 336.0) & (original description: Putative WRKY22, Description = WRKY protein, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00005150ctg007_10732-14183' '(at5g49520 : 143.0) Encodes WRKY48, a member of the WRKY Transcription Factor. WRKY48 is a stress- and pathogen-induced transcriptional activator that represses plant basal defense.; WRKY DNA-binding protein 48 (WRKY48); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 23 (TAIR:AT2G47260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 113.0) no description available & (reliability: 286.0) & (original description: Putative WRKY1, Description = WRKY1, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00005295ctg005_3438-7807' '(at4g11070 : 127.0) member of WRKY Transcription Factor; Group III; WRKY41; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1); Has 3140 Blast hits to 2706 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3129; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66760 : 96.5) no description available & (reliability: 254.0) & (original description: Putative WRKY3, Description = WRKY3, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00006117ctg015_1-7999' '(at2g40740 : 139.0) member of WRKY Transcription Factor; Group III; WRKY DNA-binding protein 55 (WRKY55); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 46 (TAIR:AT2G46400.1); Has 942 Blast hits to 929 proteins in 64 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 942; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66760 : 98.8) no description available & (reliability: 278.0) & (original description: Putative WRKY5, Description = Transcription factor WRKY5, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00006913ctg015_4086-8510' '(at4g11070 : 113.0) member of WRKY Transcription Factor; Group III; WRKY41; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1); Has 3140 Blast hits to 2706 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3129; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|47695 : 100.0) no description available & (reliability: 226.0) & (original description: Putative dreb2, Description = AP2 domain-containing transcription factor family protein, PFAM = PF03106;PF00847)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00007783ctg005_2133-6857' '(at4g26440 : 216.0) member of WRKY Transcription Factor; Group I; WRKY DNA-binding protein 34 (WRKY34); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 2 (TAIR:AT5G56270.1); Has 5766 Blast hits to 3064 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5735; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|66760 : 111.0) no description available & (reliability: 432.0) & (original description: Putative WRK, Description = Putative WRKY transcription factor 2, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00009765ctg000_1-21871' '(at4g01250 : 163.0) member of WRKY Transcription Factor; Group II-e; WRKY22; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23550.1); Has 3274 Blast hits to 2836 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 3256; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|66760 : 97.2) no description available & (reliability: 326.0) & (original description: Putative WRKY5, Description = WRKY protein, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00010549ctg000_4842-8917' '(at4g18170 : 142.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 28 (WRKY28); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group IIc (InterPro:IPR017396); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 8 (TAIR:AT5G46350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 108.0) no description available & (reliability: 284.0) & (original description: Putative WRKY9, Description = WRKY super family protein, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00011161ctg002_4205-7882' '(at4g01250 : 177.0) member of WRKY Transcription Factor; Group II-e; WRKY22; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23550.1); Has 3274 Blast hits to 2836 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 3256; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|66760 : 105.0) no description available & (reliability: 354.0) & (original description: Putative WRKY22, Description = WRKY transcription factor 22, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00013943ctg005_24028-27343' '(at4g24240 : 218.0) Encodes a Ca-dependent calmodulin binding protein. Sequence similarity to the WRKY transcription factor gene family.; WRKY DNA-binding protein 7 (WRKY7); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 11 (TAIR:AT4G31550.1); Has 3521 Blast hits to 3002 proteins in 204 species: Archae - 0; Bacteria - 2; Metazoa - 39; Fungi - 4; Plants - 3353; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|66760 : 106.0) no description available & (reliability: 436.0) & (original description: Putative WRKY6, Description = WRKY protein, PFAM = PF10533;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00014402ctg016_6258-12264' '(at2g47260 : 133.0) Encodes a member of WRKY Transcription Factor; Group I. Involved in nematode feeding site establishment.; WRKY DNA-binding protein 23 (WRKY23); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group IIc (InterPro:IPR017396); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT3G62340.1); Has 3541 Blast hits to 3088 proteins in 202 species: Archae - 0; Bacteria - 3; Metazoa - 11; Fungi - 7; Plants - 3503; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|66760 : 112.0) no description available & (reliability: 266.0) & (original description: Putative WRKY1, Description = WRKY1, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00014457ctg000_7530-11773' '(at1g68150 : 196.0) member of WRKY Transcription Factor; Group II-b; WRKY DNA-binding protein 9 (WRKY9); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 72 (TAIR:AT5G15130.1); Has 6485 Blast hits to 5077 proteins in 398 species: Archae - 3; Bacteria - 121; Metazoa - 1108; Fungi - 186; Plants - 3539; Viruses - 39; Other Eukaryotes - 1489 (source: NCBI BLink). & (gnl|cdd|66760 : 105.0) no description available & (reliability: 392.0) & (original description: Putative WRKY9, Description = WRKY transcription factor 9, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00015934ctg004_2767-8243' '(at4g26640 : 324.0) member of WRKY Transcription Factor; Group I; WRKY20; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 2 (TAIR:AT5G56270.1); Has 5750 Blast hits to 3121 proteins in 204 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 10; Plants - 5662; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|66760 : 117.0) no description available & (reliability: 648.0) & (original description: Putative WRKY22, Description = WRKY transcription factor 22, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00016567ctg001_149-3410' '(at5g52830 : 120.0) Encodes a WRKY transcription factor WRKY27. Mutation in Arabidopsis WRKY27 results in delayed symptom development in response to the bacterial wilt pathogen Ralstonia solanacearum.; WRKY DNA-binding protein 27 (WRKY27); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G01250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66760 : 99.6) no description available & (reliability: 240.0) & (original description: Putative WRKY10, Description = WRKY protein, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00020203ctg002_1-9024' '(at5g56270 : 270.0) WRKY transcription factor 2; WRKY DNA-binding protein 2 (WRKY2); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 34 (TAIR:AT4G26440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 118.0) no description available & (reliability: 540.0) & (original description: Putative wrky7, Description = WRKY transcription factor, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00021449ctg005_3873-6819' '(at5g24110 : 85.5) member of WRKY Transcription Factor; Group III; WRKY DNA-binding protein 30 (WRKY30); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative WRKY12, Description = WRKY transcription factor, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00021674ctg008_1549-6523' '(at2g38470 : 303.0) Member of the plant WRKY transcription factor family. Regulates the antagonistic relationship between defense pathways mediating responses to P. syringae and necrotrophic fungal pathogens. Located in nucleus. Involved in response to various abiotic stresses - especially salt stress.; WRKY DNA-binding protein 33 (WRKY33); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 4 (TAIR:AT1G13960.1); Has 7573 Blast hits to 4449 proteins in 326 species: Archae - 2; Bacteria - 120; Metazoa - 293; Fungi - 170; Plants - 5689; Viruses - 9; Other Eukaryotes - 1290 (source: NCBI BLink). & (gnl|cdd|66760 : 117.0) no description available & (reliability: 606.0) & (original description: Putative WRKY33, Description = Probable WRKY transcription factor 33, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00023308ctg001_5759-8889' '(gnl|cdd|66760 : 103.0) no description available & (at2g34830 : 84.3) member of WRKY Transcription Factor; Group II-e; WRKY DNA-binding protein 35 (WRKY35); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group Iie (InterPro:IPR017412); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 14 (TAIR:AT1G30650.1); Has 5047 Blast hits to 3028 proteins in 237 species: Archae - 0; Bacteria - 12; Metazoa - 64; Fungi - 63; Plants - 3289; Viruses - 0; Other Eukaryotes - 1619 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative WRKY5, Description = WRKY 5 transcription factor, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00028408ctg006_5881-10402' '(at5g15130 : 171.0) member of WRKY Transcription Factor; Group II-b; contribute to basal immunity.; WRKY DNA-binding protein 72 (WRKY72); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 61 (TAIR:AT1G18860.1); Has 6758 Blast hits to 4151 proteins in 378 species: Archae - 0; Bacteria - 669; Metazoa - 395; Fungi - 387; Plants - 3478; Viruses - 9; Other Eukaryotes - 1820 (source: NCBI BLink). & (gnl|cdd|66760 : 101.0) no description available & (reliability: 342.0) & (original description: Putative WRKY37, Description = WRKY transcription factor 37, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00031394ctg002_2017-10868' '(at4g26640 : 368.0) member of WRKY Transcription Factor; Group I; WRKY20; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 2 (TAIR:AT5G56270.1); Has 5750 Blast hits to 3121 proteins in 204 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 10; Plants - 5662; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|66760 : 121.0) no description available & (reliability: 736.0) & (original description: Putative WRKY20, Description = Probable WRKY transcription factor 20, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00033125ctg002_2616-8898' '(at1g69310 : 186.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 57 (WRKY57); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 48 (TAIR:AT5G49520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66760 : 111.0) no description available & (reliability: 372.0) & (original description: Putative WRKY57, Description = Probable WRKY transcription factor 57, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00038646ctg001_832-2995' '(at4g01250 : 112.0) member of WRKY Transcription Factor; Group II-e; WRKY22; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23550.1); Has 3274 Blast hits to 2836 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 3256; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|66760 : 97.6) no description available & (reliability: 224.0) & (original description: Putative WRKY10, Description = WRKY family transcription factor, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00039679ctg005_3747-6748' '(at4g11070 : 189.0) member of WRKY Transcription Factor; Group III; WRKY41; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1); Has 3140 Blast hits to 2706 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3129; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66760 : 101.0) no description available & (reliability: 378.0) & (original description: Putative WRKY53, Description = Probable WRKY transcription factor 53, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00045773ctg000_342-8231' '(at4g30935 : 270.0) member of WRKY Transcription Factor; Group I; WRKY DNA-binding protein 32 (WRKY32); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 3 (TAIR:AT2G03340.1); Has 5626 Blast hits to 3106 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 40; Fungi - 11; Plants - 5536; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|66760 : 106.0) no description available & (reliability: 540.0) & (original description: Putative WRKY2, Description = WRKY transcription factor, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00051343ctg005_20246-24021' '(at3g56400 : 127.0) member of WRKY Transcription Factor; Group III. Function as activator of SA-dependent defense genes and a repressor of JA-regulated genes. WRKY70-controlled suppression of JA-signaling is partly executed by NPR1.; WRKY DNA-binding protein 70 (WRKY70); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 54 (TAIR:AT2G40750.1); Has 3203 Blast hits to 2772 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3190; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative WRKY3, Description = DNA-binding protein 3, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben044scf00060653ctg001_1-3698' '(at4g22070 : 324.0) member of WRKY Transcription Factor; Group II-b; WRKY DNA-binding protein 31 (WRKY31); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G04450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66760 : 111.0) no description available & (reliability: 648.0) & (original description: Putative WRKY42, Description = WRKY transcription factor 42, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101ctg14444_1-2660' '(at3g01970 : 158.0) member of WRKY Transcription Factor; Group I; WRKY DNA-binding protein 45 (WRKY45); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 75 (TAIR:AT5G13080.1); Has 3497 Blast hits to 3049 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3482; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|66760 : 104.0) no description available & (reliability: 316.0) & (original description: Putative WRKY43, Description = Probable WRKY transcription factor 43, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101ctg16115_1105-5164' '(at1g80840 : 232.0) Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.; WRKY DNA-binding protein 40 (WRKY40); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 18 (TAIR:AT4G31800.2); Has 3306 Blast hits to 2859 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3292; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|66760 : 103.0) no description available & (reliability: 464.0) & (original description: Putative wizz, Description = WIZZ, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf00159_991406-996954' '(at2g04880 : 199.0) Encodes WRKY1, a member of the WRKY transcription factors in plants involved in disease resistance, abiotic stress, senescence as well as in some developmental processes. WRKY1 is involved in the salicylic acid signaling pathway. The crystal structure of the WRKY1 C-terminal domain revealed a zinc-binding site and identified the DNA-binding residues of WRKY1.; zinc-dependent activator protein-1 (ZAP1); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor family protein (TAIR:AT4G26640.2); Has 5746 Blast hits to 3098 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 2; Plants - 5699; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|66760 : 111.0) no description available & (reliability: 398.0) & (original description: Putative WRKY1, Description = DNA-binding protein 1, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf00272_9612-15519' '(at1g13960 : 345.0) Encodes WRKY DNA-binding protein 4 (WRKY4).; WRKY DNA-binding protein 4 (WRKY4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 3 (TAIR:AT2G03340.1); Has 5891 Blast hits to 3196 proteins in 226 species: Archae - 0; Bacteria - 0; Metazoa - 44; Fungi - 6; Plants - 5778; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|66760 : 121.0) no description available & (reliability: 690.0) & (original description: Putative WRKY4, Description = Probable WRKY transcription factor 4, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf00581_169076-172296' '(at1g29280 : 207.0) member of WRKY Transcription Factor; Group II-e; WRKY DNA-binding protein 65 (WRKY65); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 69 (TAIR:AT3G58710.1); Has 3604 Blast hits to 3142 proteins in 247 species: Archae - 4; Bacteria - 64; Metazoa - 46; Fungi - 24; Plants - 3284; Viruses - 4; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|66760 : 105.0) no description available & (reliability: 414.0) & (original description: Putative WRKY65, Description = Probable WRKY transcription factor 65, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf00646_304087-308563' '(at1g68150 : 197.0) member of WRKY Transcription Factor; Group II-b; WRKY DNA-binding protein 9 (WRKY9); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 72 (TAIR:AT5G15130.1); Has 6485 Blast hits to 5077 proteins in 398 species: Archae - 3; Bacteria - 121; Metazoa - 1108; Fungi - 186; Plants - 3539; Viruses - 39; Other Eukaryotes - 1489 (source: NCBI BLink). & (gnl|cdd|66760 : 108.0) no description available & (reliability: 394.0) & (original description: Putative WRKY9, Description = WRKY transcription factor 9, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf00715_917577-921194' '(at1g80840 : 197.0) Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.; WRKY DNA-binding protein 40 (WRKY40); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 18 (TAIR:AT4G31800.2); Has 3306 Blast hits to 2859 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3292; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|66760 : 103.0) no description available & (reliability: 394.0) & (original description: Putative wizz, Description = WIZZ, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf00788_221754-299138' '(at4g31550 : 261.0) member of WRKY Transcription Factor; Group II-d; negative regulator of basal resistance to Pseudomonas syringae.; WRKY DNA-binding protein 11 (WRKY11); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 17 (TAIR:AT2G24570.1); Has 3338 Blast hits to 2891 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3320; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|66760 : 106.0) no description available & (reliability: 522.0) & (original description: Putative WRKY11, Description = Probable WRKY transcription factor 11, PFAM = PF10533;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf00793_392377-404859' '(at2g47260 : 144.0) Encodes a member of WRKY Transcription Factor; Group I. Involved in nematode feeding site establishment.; WRKY DNA-binding protein 23 (WRKY23); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group IIc (InterPro:IPR017396); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT3G62340.1); Has 3541 Blast hits to 3088 proteins in 202 species: Archae - 0; Bacteria - 3; Metazoa - 11; Fungi - 7; Plants - 3503; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|66760 : 113.0) no description available & (reliability: 288.0) & (original description: Putative WRKY1, Description = Transcription factor CaWRKY1, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf00905_422106-425375' '(at4g31550 : 249.0) member of WRKY Transcription Factor; Group II-d; negative regulator of basal resistance to Pseudomonas syringae.; WRKY DNA-binding protein 11 (WRKY11); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 17 (TAIR:AT2G24570.1); Has 3338 Blast hits to 2891 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3320; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|66760 : 104.0) no description available & (reliability: 498.0) & (original description: Putative WRKY17, Description = WRKY domain class transcription factor, PFAM = PF10533;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf01062_598790-614752' '(at4g30935 : 275.0) member of WRKY Transcription Factor; Group I; WRKY DNA-binding protein 32 (WRKY32); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 3 (TAIR:AT2G03340.1); Has 5626 Blast hits to 3106 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 40; Fungi - 11; Plants - 5536; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|66760 : 107.0) no description available & (reliability: 550.0) & (original description: Putative WRKY2, Description = WRKY transcription factor, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf01076_273667-278076' '(at4g11070 : 120.0) member of WRKY Transcription Factor; Group III; WRKY41; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1); Has 3140 Blast hits to 2706 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3129; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66760 : 94.5) no description available & (reliability: 240.0) & (original description: Putative WRKY3, Description = WRKY3, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf01173_97663-103279' '(at5g56270 : 467.0) WRKY transcription factor 2; WRKY DNA-binding protein 2 (WRKY2); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 34 (TAIR:AT4G26440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 118.0) no description available & (reliability: 934.0) & (original description: Putative WRKY2, Description = Probable WRKY transcription factor 2, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf01507_53240-57245' '(at1g29860 : 152.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 71 (WRKY71); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group IIc (InterPro:IPR017396); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 28 (TAIR:AT4G18170.1); Has 3523 Blast hits to 3068 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3507; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|66760 : 111.0) no description available & (reliability: 304.0) & (original description: Putative WRKY28, Description = Probable WRKY transcription factor 28, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf01683_1462902-1471045' '(at4g39410 : 149.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 13 (WRKY13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT2G44745.1); Has 3526 Blast hits to 3073 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 3490; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|66760 : 111.0) no description available & (reliability: 298.0) & (original description: Putative WRKY5, Description = WRKY domain class transcription factor, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf01721_842860-846181' '(at4g31550 : 264.0) member of WRKY Transcription Factor; Group II-d; negative regulator of basal resistance to Pseudomonas syringae.; WRKY DNA-binding protein 11 (WRKY11); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 17 (TAIR:AT2G24570.1); Has 3338 Blast hits to 2891 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3320; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|66760 : 105.0) no description available & (reliability: 528.0) & (original description: Putative WRKY17, Description = Probable WRKY transcription factor 17, PFAM = PF10533;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf01727_202456-206635' '(at5g15130 : 176.0) member of WRKY Transcription Factor; Group II-b; contribute to basal immunity.; WRKY DNA-binding protein 72 (WRKY72); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 61 (TAIR:AT1G18860.1); Has 6758 Blast hits to 4151 proteins in 378 species: Archae - 0; Bacteria - 669; Metazoa - 395; Fungi - 387; Plants - 3478; Viruses - 9; Other Eukaryotes - 1820 (source: NCBI BLink). & (gnl|cdd|66760 : 99.6) no description available & (reliability: 352.0) & (original description: Putative ACRE126, Description = Avr9/Cf-9 rapidly elicited protein 126, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf01782_1245440-1249234' '(at2g30590 : 317.0) Encodes WRKY DNA-binding protein 21 (WRKY21).; WRKY DNA-binding protein 21 (WRKY21); FUNCTIONS IN: calmodulin binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 74 (TAIR:AT5G28650.1); Has 39192 Blast hits to 15053 proteins in 688 species: Archae - 6; Bacteria - 1092; Metazoa - 13773; Fungi - 4123; Plants - 4597; Viruses - 447; Other Eukaryotes - 15154 (source: NCBI BLink). & (gnl|cdd|66760 : 108.0) no description available & (reliability: 634.0) & (original description: Putative WRKY21, Description = Probable WRKY transcription factor 21, PFAM = PF03106;PF10533)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf01785_692512-696130' '(at1g29860 : 164.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 71 (WRKY71); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group IIc (InterPro:IPR017396); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 28 (TAIR:AT4G18170.1); Has 3523 Blast hits to 3068 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3507; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|66760 : 114.0) no description available & (reliability: 328.0) & (original description: Putative WRKY28, Description = Probable WRKY transcription factor 28, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf01833_105055-111061' '(at2g47260 : 148.0) Encodes a member of WRKY Transcription Factor; Group I. Involved in nematode feeding site establishment.; WRKY DNA-binding protein 23 (WRKY23); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group IIc (InterPro:IPR017396); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT3G62340.1); Has 3541 Blast hits to 3088 proteins in 202 species: Archae - 0; Bacteria - 3; Metazoa - 11; Fungi - 7; Plants - 3503; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|66760 : 114.0) no description available & (reliability: 296.0) & (original description: Putative WRKY1, Description = WRKY1, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf02145_895595-900400' '(at1g62300 : 348.0) Encodes a transcription factor WRKY6. Regulates Phosphate1 (Pho1) expression in response to low phosphate (Pi) stress.; WRKY6; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G04450.1); Has 3824 Blast hits to 3363 proteins in 295 species: Archae - 0; Bacteria - 33; Metazoa - 119; Fungi - 43; Plants - 3509; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|66760 : 113.0) no description available & (reliability: 696.0) & (original description: Putative WRKY6, Description = WRKY transcription factor 6, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf02170_224540-228880' '(at1g62300 : 325.0) Encodes a transcription factor WRKY6. Regulates Phosphate1 (Pho1) expression in response to low phosphate (Pi) stress.; WRKY6; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G04450.1); Has 3824 Blast hits to 3363 proteins in 295 species: Archae - 0; Bacteria - 33; Metazoa - 119; Fungi - 43; Plants - 3509; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|66760 : 106.0) no description available & (reliability: 650.0) & (original description: Putative WRKY6, Description = WRKY transcription factor, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf02334_195185-199210' '(at4g23550 : 119.0) Encodes WRKY DNA-binding protein 29 (WRKY29).; WRKY29; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G01250.1); Has 3402 Blast hits to 2953 proteins in 188 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3386; Viruses - 2; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|66760 : 94.9) no description available & (reliability: 238.0) & (original description: Putative WRKY4, Description = WRKY super family protein, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf02362_201162-205108' '(at2g38470 : 262.0) Member of the plant WRKY transcription factor family. Regulates the antagonistic relationship between defense pathways mediating responses to P. syringae and necrotrophic fungal pathogens. Located in nucleus. Involved in response to various abiotic stresses - especially salt stress.; WRKY DNA-binding protein 33 (WRKY33); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 4 (TAIR:AT1G13960.1); Has 7573 Blast hits to 4449 proteins in 326 species: Archae - 2; Bacteria - 120; Metazoa - 293; Fungi - 170; Plants - 5689; Viruses - 9; Other Eukaryotes - 1290 (source: NCBI BLink). & (gnl|cdd|66760 : 116.0) no description available & (reliability: 524.0) & (original description: Putative WRKY33, Description = Probable WRKY transcription factor 33, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf02471_346343-365743' '(at2g44745 : 164.0) WRKY family transcription factor; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 13 (TAIR:AT4G39410.1); Has 3506 Blast hits to 3049 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3483; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|66760 : 105.0) no description available & (reliability: 328.0) & (original description: Putative WRKY12, Description = WRKY protein, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf02478_103489-112480' '(at2g40740 : 153.0) member of WRKY Transcription Factor; Group III; WRKY DNA-binding protein 55 (WRKY55); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 46 (TAIR:AT2G46400.1); Has 942 Blast hits to 929 proteins in 64 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 942; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66760 : 97.6) no description available & (reliability: 306.0) & (original description: Putative WRKY55, Description = WRKY transcription factor 55, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf02499_257663-260403' '(at5g56270 : 113.0) WRKY transcription factor 2; WRKY DNA-binding protein 2 (WRKY2); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 34 (TAIR:AT4G26440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 108.0) no description available & (reliability: 226.0) & (original description: Putative WRKY79, Description = WRKY transcription factor, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf02511_444785-448242' '(at4g11070 : 145.0) member of WRKY Transcription Factor; Group III; WRKY41; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1); Has 3140 Blast hits to 2706 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3129; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66760 : 100.0) no description available & (reliability: 290.0) & (original description: Putative WRKY2, Description = Transcriptional factor WRKY II, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf02531_386992-390203' '(at1g29280 : 199.0) member of WRKY Transcription Factor; Group II-e; WRKY DNA-binding protein 65 (WRKY65); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 69 (TAIR:AT3G58710.1); Has 3604 Blast hits to 3142 proteins in 247 species: Archae - 4; Bacteria - 64; Metazoa - 46; Fungi - 24; Plants - 3284; Viruses - 4; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|66760 : 104.0) no description available & (reliability: 398.0) & (original description: Putative WRKY65, Description = Probable WRKY transcription factor 65, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf02565_221511-226050' '(at4g11070 : 114.0) member of WRKY Transcription Factor; Group III; WRKY41; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1); Has 3140 Blast hits to 2706 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3129; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative WRKY43, Description = WRKY transcription factor 55, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf02565_221631-226055' '(at4g11070 : 112.0) member of WRKY Transcription Factor; Group III; WRKY41; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1); Has 3140 Blast hits to 2706 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3129; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|47695 : 101.0) no description available & (reliability: 224.0) & (original description: Putative dreb2, Description = AP2 domain-containing transcription factor family protein, PFAM = PF03106;PF00847)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf03009_334630-337987' '(at2g23320 : 170.0) Encodes WRKY DNA-binding protein 15 (WRKY15).; WRKY DNA-binding protein 15 (WRKY15); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 11 (TAIR:AT4G31550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66760 : 106.0) no description available & (reliability: 340.0) & (original description: Putative WRKY15, Description = Probable WRKY transcription factor 15, PFAM = PF10533;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf03070_601001-604821' '(at2g47260 : 118.0) Encodes a member of WRKY Transcription Factor; Group I. Involved in nematode feeding site establishment.; WRKY DNA-binding protein 23 (WRKY23); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group IIc (InterPro:IPR017396); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT3G62340.1); Has 3541 Blast hits to 3088 proteins in 202 species: Archae - 0; Bacteria - 3; Metazoa - 11; Fungi - 7; Plants - 3503; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|66760 : 102.0) no description available & (reliability: 236.0) & (original description: Putative WRKY1, Description = WRKY protein, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf03239_74068-77425' '(at4g01250 : 177.0) member of WRKY Transcription Factor; Group II-e; WRKY22; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23550.1); Has 3274 Blast hits to 2836 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 3256; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|66760 : 105.0) no description available & (reliability: 354.0) & (original description: Putative WRKY22, Description = WRKY transcription factor 22, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf03298_553513-559046' '(at5g56270 : 463.0) WRKY transcription factor 2; WRKY DNA-binding protein 2 (WRKY2); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 34 (TAIR:AT4G26440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 118.0) no description available & (reliability: 926.0) & (original description: Putative WRKY2, Description = WRKYP2, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf03348_50677-57259' '(at2g40740 : 148.0) member of WRKY Transcription Factor; Group III; WRKY DNA-binding protein 55 (WRKY55); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 46 (TAIR:AT2G46400.1); Has 942 Blast hits to 929 proteins in 64 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 942; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66760 : 101.0) no description available & (reliability: 296.0) & (original description: Putative WRKY5, Description = Transcription factor WRKY5, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf03461_449430-458840' '(at1g13960 : 360.0) Encodes WRKY DNA-binding protein 4 (WRKY4).; WRKY DNA-binding protein 4 (WRKY4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 3 (TAIR:AT2G03340.1); Has 5891 Blast hits to 3196 proteins in 226 species: Archae - 0; Bacteria - 0; Metazoa - 44; Fungi - 6; Plants - 5778; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|66760 : 120.0) no description available & (reliability: 720.0) & (original description: Putative WRKY3, Description = Probable WRKY transcription factor 3, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf03739_538814-549591' '(at3g56400 : 94.0) member of WRKY Transcription Factor; Group III. Function as activator of SA-dependent defense genes and a repressor of JA-regulated genes. WRKY70-controlled suppression of JA-signaling is partly executed by NPR1.; WRKY DNA-binding protein 70 (WRKY70); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 54 (TAIR:AT2G40750.1); Has 3203 Blast hits to 2772 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3190; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative WRKY3, Description = DNA-binding protein 3, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf03906_422142-426385' '(at1g68150 : 195.0) member of WRKY Transcription Factor; Group II-b; WRKY DNA-binding protein 9 (WRKY9); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 72 (TAIR:AT5G15130.1); Has 6485 Blast hits to 5077 proteins in 398 species: Archae - 3; Bacteria - 121; Metazoa - 1108; Fungi - 186; Plants - 3539; Viruses - 39; Other Eukaryotes - 1489 (source: NCBI BLink). & (gnl|cdd|66760 : 106.0) no description available & (reliability: 390.0) & (original description: Putative WRKY9, Description = WRKY transcription factor 9, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf03969_145120-149808' '(at4g31805 : 87.0) WRKY family transcription factor; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT5G10890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative PGSC0003DMG400021201, Description = Putative uncharacterized protein Sb04g035860, PFAM = )' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf03985_465858-469145' '(at4g11070 : 188.0) member of WRKY Transcription Factor; Group III; WRKY41; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1); Has 3140 Blast hits to 2706 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3129; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66760 : 103.0) no description available & (reliability: 376.0) & (original description: Putative WRKY53, Description = Probable WRKY transcription factor 53, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf04000_238011-241132' '(gnl|cdd|66760 : 102.0) no description available & (at2g34830 : 83.2) member of WRKY Transcription Factor; Group II-e; WRKY DNA-binding protein 35 (WRKY35); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group Iie (InterPro:IPR017412); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 14 (TAIR:AT1G30650.1); Has 5047 Blast hits to 3028 proteins in 237 species: Archae - 0; Bacteria - 12; Metazoa - 64; Fungi - 63; Plants - 3289; Viruses - 0; Other Eukaryotes - 1619 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative WRKY65, Description = WRKY transcription factor 65, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf04011_560583-571193' '(at4g04450 : 337.0) member of WRKY Transcription Factor; Group II-b; WRKY42; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 31 (TAIR:AT4G22070.1); Has 3599 Blast hits to 3152 proteins in 220 species: Archae - 0; Bacteria - 6; Metazoa - 41; Fungi - 2; Plants - 3474; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|66760 : 113.0) no description available & (reliability: 674.0) & (original description: Putative WRKY42, Description = WRKY transcription factor 42, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf04407_91573-98297' '(at5g15130 : 176.0) member of WRKY Transcription Factor; Group II-b; contribute to basal immunity.; WRKY DNA-binding protein 72 (WRKY72); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 61 (TAIR:AT1G18860.1); Has 6758 Blast hits to 4151 proteins in 378 species: Archae - 0; Bacteria - 669; Metazoa - 395; Fungi - 387; Plants - 3478; Viruses - 9; Other Eukaryotes - 1820 (source: NCBI BLink). & (gnl|cdd|66760 : 106.0) no description available & (reliability: 352.0) & (original description: Putative WRKY61, Description = Probable WRKY transcription factor 61, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf04881_171837-175583' '(at1g29860 : 164.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 71 (WRKY71); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group IIc (InterPro:IPR017396); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 28 (TAIR:AT4G18170.1); Has 3523 Blast hits to 3068 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3507; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|66760 : 115.0) no description available & (reliability: 328.0) & (original description: Putative WRKY28, Description = Probable WRKY transcription factor 28, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf04944_498542-501853' '(at1g80840 : 181.0) Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.; WRKY DNA-binding protein 40 (WRKY40); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 18 (TAIR:AT4G31800.2); Has 3306 Blast hits to 2859 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3292; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|66760 : 101.0) no description available & (reliability: 362.0) & (original description: Putative WRKY60, Description = Probable WRKY transcription factor 60, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf05135_342466-346260' '(at2g23320 : 194.0) Encodes WRKY DNA-binding protein 15 (WRKY15).; WRKY DNA-binding protein 15 (WRKY15); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 11 (TAIR:AT4G31550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66760 : 106.0) no description available & (reliability: 388.0) & (original description: Putative WRKY6, Description = WRKY protein, PFAM = PF03106;PF10533)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf05387_646638-652311' '(at1g30650 : 236.0) member of WRKY Transcription Factor; Group II-e; WRKY DNA-binding protein 14 (WRKY14); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group Iie (InterPro:IPR017412); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 35 (TAIR:AT2G34830.1); Has 3350 Blast hits to 2895 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 12; Plants - 3273; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (gnl|cdd|66760 : 108.0) no description available & (reliability: 472.0) & (original description: Putative WRKY14, Description = Probable WRKY transcription factor 14, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf05584_4600-8501' '(at4g11070 : 110.0) member of WRKY Transcription Factor; Group III; WRKY41; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1); Has 3140 Blast hits to 2706 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3129; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative WRKY43, Description = Probable WRKY transcription factor 53, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf06026_124805-132166' '(at1g13960 : 309.0) Encodes WRKY DNA-binding protein 4 (WRKY4).; WRKY DNA-binding protein 4 (WRKY4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 3 (TAIR:AT2G03340.1); Has 5891 Blast hits to 3196 proteins in 226 species: Archae - 0; Bacteria - 0; Metazoa - 44; Fungi - 6; Plants - 5778; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|66760 : 119.0) no description available & (reliability: 618.0) & (original description: Putative WRKY31, Description = WRKY protein, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf06091_409591-414251' '(at1g80840 : 228.0) Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.; WRKY DNA-binding protein 40 (WRKY40); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 18 (TAIR:AT4G31800.2); Has 3306 Blast hits to 2859 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3292; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|66760 : 95.7) no description available & (reliability: 456.0) & (original description: Putative wizz, Description = WIZZ, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf06603_351479-355114' '(at3g56400 : 136.0) member of WRKY Transcription Factor; Group III. Function as activator of SA-dependent defense genes and a repressor of JA-regulated genes. WRKY70-controlled suppression of JA-signaling is partly executed by NPR1.; WRKY DNA-binding protein 70 (WRKY70); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 54 (TAIR:AT2G40750.1); Has 3203 Blast hits to 2772 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3190; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|66760 : 80.7) no description available & (reliability: 272.0) & (original description: Putative WRKY3, Description = WRKY3, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf07063_44239-48271' '(at4g23810 : 188.0) member of WRKY Transcription Factor; Group III; WRKY53; FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G11070.1); Has 3150 Blast hits to 2715 proteins in 122 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3139; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66760 : 101.0) no description available & (reliability: 376.0) & (original description: Putative WRKY1, Description = WRKY family transcription factor, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf07682_8129-20821' '(at4g26640 : 201.0) member of WRKY Transcription Factor; Group I; WRKY20; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 2 (TAIR:AT5G56270.1); Has 5750 Blast hits to 3121 proteins in 204 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 10; Plants - 5662; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|66760 : 111.0) no description available & (reliability: 402.0) & (original description: Putative WRKY1, Description = DNA-binding protein 1, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf07746_2527-14594' '(at4g26640 : 391.0) member of WRKY Transcription Factor; Group I; WRKY20; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 2 (TAIR:AT5G56270.1); Has 5750 Blast hits to 3121 proteins in 204 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 10; Plants - 5662; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|66760 : 121.0) no description available & (reliability: 782.0) & (original description: Putative WRKY20, Description = Probable WRKY transcription factor 20, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf08411_81095-86167' '(at1g64000 : 170.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 56 (WRKY56); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 24 (TAIR:AT5G41570.1); Has 3510 Blast hits to 3053 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3491; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|66760 : 108.0) no description available & (reliability: 340.0) & (original description: Putative WRKY43, Description = Probable WRKY transcription factor 43, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf08526_177329-196407' '(gnl|cdd|66760 : 94.2) no description available & (at5g64810 : 89.7) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 51 (WRKY51); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 50 (TAIR:AT5G26170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative WRKY12, Description = Putative WRKY transcription factor, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf08604_118806-122565' '(at5g43290 : 133.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 49 (WRKY49); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 57 (TAIR:AT1G69310.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 103.0) no description available & (reliability: 266.0) & (original description: Putative WRKY38, Description = WRKY transcription factor 38, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf08811_4900-12127' '(at4g26640 : 403.0) member of WRKY Transcription Factor; Group I; WRKY20; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 2 (TAIR:AT5G56270.1); Has 5750 Blast hits to 3121 proteins in 204 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 10; Plants - 5662; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|66760 : 119.0) no description available & (reliability: 806.0) & (original description: Putative WRKY20, Description = Probable WRKY transcription factor 20, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf09057_112702-127029' '(at4g01250 : 174.0) member of WRKY Transcription Factor; Group II-e; WRKY22; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23550.1); Has 3274 Blast hits to 2836 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 3256; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|66760 : 106.0) no description available & (reliability: 348.0) & (original description: Putative WRKY22, Description = WRKY transcription factor 22, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf09107_243347-249847' '(at1g69310 : 179.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 57 (WRKY57); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 48 (TAIR:AT5G49520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66760 : 111.0) no description available & (reliability: 358.0) & (original description: Putative WRKY57, Description = Probable WRKY transcription factor 57, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf09458_30409-34377' '(at4g23550 : 118.0) Encodes WRKY DNA-binding protein 29 (WRKY29).; WRKY29; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G01250.1); Has 3402 Blast hits to 2953 proteins in 188 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3386; Viruses - 2; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|66760 : 91.9) no description available & (reliability: 236.0) & (original description: Putative WRKY29, Description = Probable WRKY transcription factor 29, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf09512_250862-254253' '(at4g01250 : 180.0) member of WRKY Transcription Factor; Group II-e; WRKY22; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23550.1); Has 3274 Blast hits to 2836 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 3256; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|66760 : 105.0) no description available & (reliability: 360.0) & (original description: Putative WRKY22, Description = WRKY transcription factor 22, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf09644_4656-11063' '(at5g15130 : 167.0) member of WRKY Transcription Factor; Group II-b; contribute to basal immunity.; WRKY DNA-binding protein 72 (WRKY72); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 61 (TAIR:AT1G18860.1); Has 6758 Blast hits to 4151 proteins in 378 species: Archae - 0; Bacteria - 669; Metazoa - 395; Fungi - 387; Plants - 3478; Viruses - 9; Other Eukaryotes - 1820 (source: NCBI BLink). & (gnl|cdd|66760 : 103.0) no description available & (reliability: 334.0) & (original description: Putative WRKY22, Description = WRKY protein, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf09703_308133-312088' '(at5g49520 : 145.0) Encodes WRKY48, a member of the WRKY Transcription Factor. WRKY48 is a stress- and pathogen-induced transcriptional activator that represses plant basal defense.; WRKY DNA-binding protein 48 (WRKY48); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 23 (TAIR:AT2G47260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 114.0) no description available & (reliability: 290.0) & (original description: Putative WRKY6, Description = WRKY domain class transcription factor, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf10043_166889-172364' '(at3g58710 : 185.0) member of WRKY Transcription Factor; Group II-e; WRKY DNA-binding protein 69 (WRKY69); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 65 (TAIR:AT1G29280.1); Has 3304 Blast hits to 2854 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3290; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|66760 : 99.2) no description available & (reliability: 370.0) & (original description: Putative WRKY69, Description = Probable WRKY transcription factor 69, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf10228_80646-85038' '(at2g37260 : 224.0) Encodes a protein similar to WRKY transcription factors that is expressed in the seed integument and endosperm. Mutants are defective in proanthocyanidin synthesis and seed mucilate deposition. Seeds are yellow colored. Seed size is also affected; seeds are reduced in size but only when the mutant allele is transmitted through the female parent.Loss of function allele corresponding to the DSL QTL are associated with a reduction in interploidy lethality.; TRANSPARENT TESTA GLABRA 2 (TTG2); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 3 (TAIR:AT2G03340.1); Has 5962 Blast hits to 3069 proteins in 194 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 0; Plants - 5906; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|66760 : 106.0) no description available & (reliability: 448.0) & (original description: Putative TTG2, Description = TTG2 protein, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf10306_28035-31763' '(at5g26170 : 114.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 50 (WRKY50); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 51 (TAIR:AT5G64810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66760 : 98.8) no description available & (reliability: 228.0) & (original description: Putative WRKY51, Description = Probable WRKY transcription factor 51, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf10866_305440-313549' '(at1g13960 : 308.0) Encodes WRKY DNA-binding protein 4 (WRKY4).; WRKY DNA-binding protein 4 (WRKY4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 3 (TAIR:AT2G03340.1); Has 5891 Blast hits to 3196 proteins in 226 species: Archae - 0; Bacteria - 0; Metazoa - 44; Fungi - 6; Plants - 5778; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|66760 : 116.0) no description available & (reliability: 616.0) & (original description: Putative WRKY4, Description = Probable WRKY transcription factor 4, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf11288_300532-304614' '(at2g30590 : 271.0) Encodes WRKY DNA-binding protein 21 (WRKY21).; WRKY DNA-binding protein 21 (WRKY21); FUNCTIONS IN: calmodulin binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 74 (TAIR:AT5G28650.1); Has 39192 Blast hits to 15053 proteins in 688 species: Archae - 6; Bacteria - 1092; Metazoa - 13773; Fungi - 4123; Plants - 4597; Viruses - 447; Other Eukaryotes - 15154 (source: NCBI BLink). & (gnl|cdd|66760 : 107.0) no description available & (reliability: 542.0) & (original description: Putative WRKY9, Description = WRKY transcription factor 9, PFAM = PF10533;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf11308_85059-89307' '(at2g30590 : 275.0) Encodes WRKY DNA-binding protein 21 (WRKY21).; WRKY DNA-binding protein 21 (WRKY21); FUNCTIONS IN: calmodulin binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 74 (TAIR:AT5G28650.1); Has 39192 Blast hits to 15053 proteins in 688 species: Archae - 6; Bacteria - 1092; Metazoa - 13773; Fungi - 4123; Plants - 4597; Viruses - 447; Other Eukaryotes - 15154 (source: NCBI BLink). & (gnl|cdd|66760 : 105.0) no description available & (reliability: 550.0) & (original description: Putative WRKY21, Description = Probable WRKY transcription factor 21, PFAM = PF10533;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf12084_31196-96730' '(at5g26170 : 119.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 50 (WRKY50); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 51 (TAIR:AT5G64810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66760 : 97.2) no description available & (reliability: 238.0) & (original description: Putative WRKY54, Description = WRKY protein, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf12726_2210-8474' '(at4g39410 : 162.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 13 (WRKY13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT2G44745.1); Has 3526 Blast hits to 3073 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 3490; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|66760 : 109.0) no description available & (reliability: 324.0) & (original description: Putative WRKY5, Description = WRKY domain class transcription factor, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf15671_180330-185482' '(at4g26640 : 195.0) member of WRKY Transcription Factor; Group I; WRKY20; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 2 (TAIR:AT5G56270.1); Has 5750 Blast hits to 3121 proteins in 204 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 10; Plants - 5662; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|66760 : 112.0) no description available & (reliability: 390.0) & (original description: Putative wrky7, Description = WRKY protein, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf16332_37910-44502' '(at5g26170 : 122.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 50 (WRKY50); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 51 (TAIR:AT5G64810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66760 : 101.0) no description available & (reliability: 244.0) & (original description: Putative WRKY51, Description = Probable WRKY transcription factor 51, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf17153_285-8985' '(at4g26640 : 323.0) member of WRKY Transcription Factor; Group I; WRKY20; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 2 (TAIR:AT5G56270.1); Has 5750 Blast hits to 3121 proteins in 204 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 10; Plants - 5662; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|66760 : 122.0) no description available & (reliability: 646.0) & (original description: Putative WRKY20, Description = Probable WRKY transcription factor 20, PFAM = PF03106;PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf18774_243168-247734' '(at5g13080 : 164.0) WRKY75 is one of several transcription factors induced during Pi deprivation. It is nuclear localized and regulated differentially during Pi starvation. RNAi mediated suppression of WRKY75 made the plants more susceptible to Pi stress as indicated by the higher accumulation of anthocyanin during Pi starvation.; WRKY DNA-binding protein 75 (WRKY75); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 45 (TAIR:AT3G01970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66760 : 104.0) no description available & (reliability: 328.0) & (original description: Putative wrky1, Description = WRKY transcription factor, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf24496_191986-200667' '(at5g15130 : 181.0) member of WRKY Transcription Factor; Group II-b; contribute to basal immunity.; WRKY DNA-binding protein 72 (WRKY72); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 61 (TAIR:AT1G18860.1); Has 6758 Blast hits to 4151 proteins in 378 species: Archae - 0; Bacteria - 669; Metazoa - 395; Fungi - 387; Plants - 3478; Viruses - 9; Other Eukaryotes - 1820 (source: NCBI BLink). & (gnl|cdd|66760 : 106.0) no description available & (reliability: 362.0) & (original description: Putative WRKY72, Description = Probable WRKY transcription factor 72, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf25537_11692-17807' '(at3g56400 : 132.0) member of WRKY Transcription Factor; Group III. Function as activator of SA-dependent defense genes and a repressor of JA-regulated genes. WRKY70-controlled suppression of JA-signaling is partly executed by NPR1.; WRKY DNA-binding protein 70 (WRKY70); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 54 (TAIR:AT2G40750.1); Has 3203 Blast hits to 2772 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3190; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|66760 : 83.0) no description available & (reliability: 264.0) & (original description: Putative WRKY4, Description = DNA-binding protein 4, PFAM = PF03106)' T '27.3.32' 'RNA.regulation of transcription.WRKY domain transcription factor family' 'niben101scf28100_91108-95400' '(at4g24240 : 220.0) Encodes a Ca-dependent calmodulin binding protein. Sequence similarity to the WRKY transcription factor gene family.; WRKY DNA-binding protein 7 (WRKY7); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 11 (TAIR:AT4G31550.1); Has 3521 Blast hits to 3002 proteins in 204 species: Archae - 0; Bacteria - 2; Metazoa - 39; Fungi - 4; Plants - 3353; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|66760 : 106.0) no description available & (reliability: 440.0) & (original description: Putative WRKY7, Description = Probable WRKY transcription factor 7, PFAM = PF03106;PF10533)' T '27.3.33' 'RNA.regulation of transcription.TUB transcription factor family' '' '' '27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.3scaffold3911_32933-44155' '(at5g04560 : 338.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 99.1) no description available & (reliability: 676.0) & (original description: Putative NtROS3, Description = Repressor of silencing 3, PFAM = PF15628;PF15629)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.3scaffold21123_1-13924' '(at5g04560 : 694.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 96.0) no description available & (reliability: 1388.0) & (original description: Putative DME2, Description = DNA demethylase, PFAM = PF15628;PF15629)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.3scaffold22377_3374-7703' '(at5g66350 : 194.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.; SHORT INTERNODES (SHI); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68707 : 180.0) no description available & (reliability: 388.0) & (original description: Putative SHI, Description = Expression of terpenoids 1, PFAM = PF05142)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.3scaffold25246_24167-27555' '(at1g75520 : 166.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|68707 : 162.0) no description available & (reliability: 300.0) & (original description: Putative SRS3, Description = Protein SHI RELATED SEQUENCE 3, PFAM = PF05142)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.3scaffold50135_3470-8815' '(at5g66350 : 208.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.; SHORT INTERNODES (SHI); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68707 : 189.0) no description available & (reliability: 416.0) & (original description: Putative SRS1, Description = Protein SHI RELATED SEQUENCE 1, PFAM = PF05142)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.3scaffold78187_1614-7036' '(at4g18460 : 235.0) D-Tyr-tRNA(Tyr) deacylase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: D-amino acid catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-tyrosyl-tRNA(Tyr) deacylase (InterPro:IPR003732); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38533 : 205.0) no description available & (gnl|cdd|29648 : 195.0) no description available & (reliability: 470.0) & (original description: Putative dtd, Description = D-tyrosyl-tRNA(Tyr) deacylase, PFAM = PF02580)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.3scaffold88653_632-5259' '(at3g51060 : 193.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|68707 : 189.0) no description available & (reliability: 370.0) & (original description: Putative LRP1, Description = Expression of terpenoids 1, PFAM = PF05142)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.3scaffold91200_2111-5248' '(at1g75520 : 206.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|68707 : 190.0) no description available & (reliability: 384.0) & (original description: Putative SRS7, Description = Protein SHI RELATED SEQUENCE 7, PFAM = PF05142)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.5scaffold341_6778-10467' '(gnl|cdd|68707 : 185.0) no description available & (at3g51060 : 181.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative LRP1, Description = BnaC01g31760D protein, PFAM = PF05142;PF05142)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.5scaffold1076_149717-153062' '(gnl|cdd|68707 : 161.0) no description available & (at5g66350 : 157.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.; SHORT INTERNODES (SHI); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative SRS3, Description = Protein SHI RELATED SEQUENCE 3, PFAM = PF05142)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.5scaffold2070_152630-160456' '(at1g48380 : 266.0) Encodes a novel nuclear protein required for root hair initiation and ploidy-dependent cell growth. Its sequence has similarity to the C-terminal domain of mammalian DNA topo IIalpha. Shows in vitro DNA binding activity and is likely to be part of the topo VI complex by binding to subunit A.; ROOT HAIRLESS 1 (RHL1); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: root hair initiation, DNA endoreduplication; LOCATED IN: nucleolus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 532.0) & (original description: Putative RHL1, Description = DNA-binding protein RHL1-like protein, PFAM = )' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.5scaffold2070_153243-160389' '(at1g48380 : 267.0) Encodes a novel nuclear protein required for root hair initiation and ploidy-dependent cell growth. Its sequence has similarity to the C-terminal domain of mammalian DNA topo IIalpha. Shows in vitro DNA binding activity and is likely to be part of the topo VI complex by binding to subunit A.; ROOT HAIRLESS 1 (RHL1); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: root hair initiation, DNA endoreduplication; LOCATED IN: nucleolus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 534.0) & (original description: Putative RHL1, Description = DNA-binding protein RHL1, PFAM = )' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.5scaffold2144_351967-355386' '(at3g51060 : 213.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|68707 : 193.0) no description available & (reliability: 422.0) & (original description: Putative SHI, Description = Protein SHORT INTERNODES, PFAM = PF05142)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.5scaffold2603_51361-58671' '(gnl|cdd|68707 : 164.0) no description available & (at1g75520 : 156.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative LRP1, Description = BnaC01g31760D protein, PFAM = PF05142)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.5scaffold5110_32947-44169' '(at5g04560 : 337.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|28938 : 80.7) no description available & (reliability: 674.0) & (original description: Putative pg3, Description = Protein ROS1, PFAM = PF15628;PF15629)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.5scaffold5110_34412-83617' '(at2g36490 : 302.0) A repressor of transcriptional gene silencing. Functions by demethylating the target promoter DNA. Interacts physically with RPA2/ROR1. In the ros1 mutants, an increase in methylation is observed in a number of gene promoters. Among the loci affected by ros1, a few (RD29A and At1g76930) are affected in cytosine methylation in all sequence contexts (CpG, CpNpG or CpNpN), although many others are affected primarily in non-CpG contexts.; demeter-like 1 (DML1); FUNCTIONS IN: protein binding, DNA N-glycosylase activity, DNA-(apurinic or apyrimidinic site) lyase activity; INVOLVED IN: DNA repair, chromatin silencing, negative regulation of chromatin silencing, DNA methylation, DNA demethylation; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: HhH-GPD base excision DNA repair family protein (TAIR:AT5G04560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30526 : 99.5) no description available & (reliability: 582.0) & (original description: Putative Dem1, Description = DNA demethylase 1, PFAM = )' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'nbv0.5scaffold6102_106408-117520' '(at5g04560 : 328.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 99.5) no description available & (reliability: 656.0) & (original description: Putative NtROS3, Description = Repressor of silencing 3, PFAM = PF15629;PF15628)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben044scf00000963ctg003_1859-8485' '(q9m7j4|mfp1_tobac : 677.0) MAR-binding filament-like protein 1-1 - Nicotiana tabacum (Common tobacco) & (at3g16000 : 300.0) encodes a DNA-binding protein that binds to plastid DNA non-specifically and is associated with nucleoids and thylakoid membranes. The expression of the gene is correlated with the development of thylakoid membranes.; MAR binding filament-like protein 1 (MFP1); FUNCTIONS IN: DNA binding; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastid nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 259345 Blast hits to 118150 proteins in 3812 species: Archae - 3889; Bacteria - 64552; Metazoa - 100119; Fungi - 19969; Plants - 13824; Viruses - 1177; Other Eukaryotes - 55815 (source: NCBI BLink). & (gnl|cdd|35383 : 104.0) no description available & (reliability: 600.0) & (original description: Putative MFP1, Description = MAR-binding filament-like protein 1, PFAM = )' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben044scf00005070ctg014_16091-18546' '(at4g18460 : 226.0) D-Tyr-tRNA(Tyr) deacylase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: D-amino acid catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-tyrosyl-tRNA(Tyr) deacylase (InterPro:IPR003732); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38533 : 200.0) no description available & (gnl|cdd|29648 : 192.0) no description available & (reliability: 452.0) & (original description: Putative dtd, Description = D-tyrosyl-tRNA(Tyr) deacylase, PFAM = PF02580)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben044scf00010489ctg003_19091-33702' '(at5g04560 : 691.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 96.0) no description available & (reliability: 1382.0) & (original description: Putative DME2, Description = DNA demethylase, PFAM = PF15628;PF15629)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben044scf00012545ctg009_117-3564' '(at3g51060 : 210.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|68707 : 204.0) no description available & (reliability: 408.0) & (original description: Putative SHI, Description = Protein SHORT INTERNODES, PFAM = PF05142)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben044scf00014030ctg030_3788-10885' '(gnl|cdd|68707 : 102.0) no description available & (at5g66350 : 89.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.; SHORT INTERNODES (SHI); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative LRP1, Description = Expression of terpenoids 1, PFAM = PF05142)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben044scf00015388ctg016_7755-10604' '(gnl|cdd|68707 : 209.0) no description available & (at3g51060 : 187.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative SRS5, Description = Protein SHI RELATED SEQUENCE 5, PFAM = PF05142)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben044scf00030269ctg029_20831-26505' '(at4g25990 : 182.0) chloroplast import apparatus CIA2-like. CIA2 is a transcription factor which upregulates chloroplast translocon genes; CIL; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, LP.02 two leaves visible, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: chloroplast import apparatus 2 (TAIR:AT5G57180.2); Has 1342 Blast hits to 1342 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 1336; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative CIA2, Description = Protein CHLOROPLAST IMPORT APPARATUS 2, PFAM = PF06203)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben044scf00046891ctg006_1613-13767' '(at5g04560 : 541.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 102.0) no description available & (reliability: 1082.0) & (original description: Putative pg3, Description = Protein ROS1, PFAM = PF15628)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf00151_894130-896769' '(at3g04280 : 99.4) Encodes an atypical subtype of the ARR (Arabidopsis response regulator) protein family. ARR22 is more similar to the receiver domains of hybrid kinases than other response regulators. It acts as a phosphohistidine phosphatase when tested with phospho-AHP5 in vitro suggesting that it might be involved in a two-component phosphorelay. Expression of ARR22 transcripts appears to be localized to the chalaza and to be induced by wounding. Ectopic expression of ARR in other parts of the plant leads to reduced cytokinin-related responses and impaired root, shoot, and flower development. Overexpression of wild-type ARR22 in an arr22 mutant background causes variable defects in plant growth and fertility. But, in the same ar22 background, over-expression of versions of ARR22 that should act as dominant-negative or constitutively active proteins, based on mutations to the conserved Asp residue, do not show any phenotypic abnormalities, raising the possibility that these may not act as canonical response regulators.; response regulator 22 (RR22); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 24 (TAIR:AT5G26594.1); Has 38453 Blast hits to 37735 proteins in 2650 species: Archae - 260; Bacteria - 34151; Metazoa - 17; Fungi - 1133; Plants - 527; Viruses - 9; Other Eukaryotes - 2356 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative RR24, Description = Response regulator 24, PFAM = PF00072)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf00158_710564-715909' '(at5g66350 : 204.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.; SHORT INTERNODES (SHI); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68707 : 189.0) no description available & (reliability: 408.0) & (original description: Putative SHI, Description = Expression of terpenoids 1, PFAM = PF05142)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf00271_676835-679560' '(at5g26594 : 98.6) Encodes an atypical subtype of the ARR (Arabidopsis response regulator) protein family . It appears to be expressed in floral buds, mature flowers, and pollen. But, unlike the related ARR22 protein, it does not appear to be expressed at the seed:funiculus junction.; response regulator 24 (RR24); FUNCTIONS IN: two-component response regulator activity; INVOLVED IN: regulation of transcription, DNA-dependent, two-component signal transduction system (phosphorelay); LOCATED IN: cellular_component unknown; EXPRESSED IN: fruit, male gametophyte, flower, floral bud; CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 22 (TAIR:AT3G04280.3); Has 46165 Blast hits to 45373 proteins in 2720 species: Archae - 261; Bacteria - 41094; Metazoa - 16; Fungi - 1330; Plants - 631; Viruses - 10; Other Eukaryotes - 2823 (source: NCBI BLink). & (gnl|cdd|35739 : 84.3) no description available & (reliability: 197.2) & (original description: Putative BnaA05g33120D, Description = BnaA05g33120D protein, PFAM = PF00072)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf00383_15280-18793' '(at3g51060 : 210.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|68707 : 202.0) no description available & (reliability: 406.0) & (original description: Putative SHI, Description = Protein SHORT INTERNODES, PFAM = PF05142)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf01025_1381314-1390275' '(gnl|cdd|68707 : 155.0) no description available & (at1g19790 : 145.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 7 (SRS7); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 5 (TAIR:AT1G75520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative SHI, Description = BnaC01g31760D protein, PFAM = PF05142)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf01025_1385992-1389386' '(gnl|cdd|68707 : 155.0) no description available & (at1g75520 : 150.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative SRS3, Description = Protein SHI RELATED SEQUENCE 3, PFAM = PF05142)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf01190_65222-68338' '(gnl|cdd|68707 : 162.0) no description available & (at5g66350 : 152.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.; SHORT INTERNODES (SHI); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative SRS3, Description = Protein SHI RELATED SEQUENCE 3, PFAM = PF05142)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf01212_247713-253069' '(at4g18460 : 219.0) D-Tyr-tRNA(Tyr) deacylase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: D-amino acid catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-tyrosyl-tRNA(Tyr) deacylase (InterPro:IPR003732); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38533 : 190.0) no description available & (gnl|cdd|29648 : 181.0) no description available & (reliability: 438.0) & (original description: Putative dtd, Description = D-tyrosyl-tRNA(Tyr) deacylase, PFAM = PF02580)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf03184_681838-687797' '(at5g57180 : 206.0) Transcription regulator responsible for specific upregulation of the translocon genes atToc33 and atToc75 in leaves. Involved in protein import into chloroplast.; chloroplast import apparatus 2 (CIA2); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT4G25990.1); Has 102 Blast hits to 81 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 7; Plants - 54; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative CIA2, Description = Protein CHLOROPLAST IMPORT APPARATUS 2, PFAM = PF06203)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf03184_704793-708353' '(at5g57180 : 120.0) Transcription regulator responsible for specific upregulation of the translocon genes atToc33 and atToc75 in leaves. Involved in protein import into chloroplast.; chloroplast import apparatus 2 (CIA2); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT4G25990.1); Has 102 Blast hits to 81 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 7; Plants - 54; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative F383_07532, Description = Chloroplast import apparatus 2-like protein, PFAM = )' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf03221_59252-67078' '(at1g48380 : 266.0) Encodes a novel nuclear protein required for root hair initiation and ploidy-dependent cell growth. Its sequence has similarity to the C-terminal domain of mammalian DNA topo IIalpha. Shows in vitro DNA binding activity and is likely to be part of the topo VI complex by binding to subunit A.; ROOT HAIRLESS 1 (RHL1); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: root hair initiation, DNA endoreduplication; LOCATED IN: nucleolus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 532.0) & (original description: Putative RHL1, Description = DNA-binding protein RHL1, PFAM = )' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf03221_59766-67011' '(at1g48380 : 270.0) Encodes a novel nuclear protein required for root hair initiation and ploidy-dependent cell growth. Its sequence has similarity to the C-terminal domain of mammalian DNA topo IIalpha. Shows in vitro DNA binding activity and is likely to be part of the topo VI complex by binding to subunit A.; ROOT HAIRLESS 1 (RHL1); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: root hair initiation, DNA endoreduplication; LOCATED IN: nucleolus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 540.0) & (original description: Putative RHL1, Description = DNA-binding protein RHL1, PFAM = )' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf04664_539797-543139' '(gnl|cdd|68707 : 166.0) no description available & (at1g75520 : 147.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative SRS3, Description = Protein SHI RELATED SEQUENCE 3, PFAM = PF05142)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf05044_263505-269594' '(q9m7j4|mfp1_tobac : 679.0) MAR-binding filament-like protein 1-1 - Nicotiana tabacum (Common tobacco) & (at3g16000 : 294.0) encodes a DNA-binding protein that binds to plastid DNA non-specifically and is associated with nucleoids and thylakoid membranes. The expression of the gene is correlated with the development of thylakoid membranes.; MAR binding filament-like protein 1 (MFP1); FUNCTIONS IN: DNA binding; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastid nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 259345 Blast hits to 118150 proteins in 3812 species: Archae - 3889; Bacteria - 64552; Metazoa - 100119; Fungi - 19969; Plants - 13824; Viruses - 1177; Other Eukaryotes - 55815 (source: NCBI BLink). & (gnl|cdd|35383 : 106.0) no description available & (gnl|cdd|31389 : 81.6) no description available & (reliability: 588.0) & (original description: Putative MFP1, Description = MAR-binding filament-like protein 1, PFAM = )' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf05123_57956-70259' '(at5g04560 : 541.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 101.0) no description available & (reliability: 1082.0) & (original description: Putative pg3, Description = Protein ROS1, PFAM = PF15628)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf07368_32970-45249' '(at2g36490 : 620.0) A repressor of transcriptional gene silencing. Functions by demethylating the target promoter DNA. Interacts physically with RPA2/ROR1. In the ros1 mutants, an increase in methylation is observed in a number of gene promoters. Among the loci affected by ros1, a few (RD29A and At1g76930) are affected in cytosine methylation in all sequence contexts (CpG, CpNpG or CpNpN), although many others are affected primarily in non-CpG contexts.; demeter-like 1 (DML1); FUNCTIONS IN: protein binding, DNA N-glycosylase activity, DNA-(apurinic or apyrimidinic site) lyase activity; INVOLVED IN: DNA repair, chromatin silencing, negative regulation of chromatin silencing, DNA methylation, DNA demethylation; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: HhH-GPD base excision DNA repair family protein (TAIR:AT5G04560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1234.0) & (original description: Putative NtROS3, Description = Repressor of silencing 3, PFAM = PF15628;PF15629)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf07368_34435-89874' '(at2g36490 : 474.0) A repressor of transcriptional gene silencing. Functions by demethylating the target promoter DNA. Interacts physically with RPA2/ROR1. In the ros1 mutants, an increase in methylation is observed in a number of gene promoters. Among the loci affected by ros1, a few (RD29A and At1g76930) are affected in cytosine methylation in all sequence contexts (CpG, CpNpG or CpNpN), although many others are affected primarily in non-CpG contexts.; demeter-like 1 (DML1); FUNCTIONS IN: protein binding, DNA N-glycosylase activity, DNA-(apurinic or apyrimidinic site) lyase activity; INVOLVED IN: DNA repair, chromatin silencing, negative regulation of chromatin silencing, DNA methylation, DNA demethylation; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: HhH-GPD base excision DNA repair family protein (TAIR:AT5G04560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30526 : 98.7) no description available & (reliability: 924.0) & (original description: Putative pg3, Description = Transcriptional activator DEMETER, PFAM = )' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf08273_614611-618852' '(at3g51060 : 174.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|68707 : 164.0) no description available & (reliability: 338.0) & (original description: Putative SRS1, Description = Protein SHI RELATED SEQUENCE 1, PFAM = PF05142)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf08305_91497-104134' '(at5g04560 : 659.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 89.9) no description available & (reliability: 1318.0) & (original description: Putative DME, Description = Protein ROS1, PFAM = PF15628;PF15629)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf08533_80577-94235' '(at5g04560 : 555.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (reliability: 1110.0) & (original description: Putative DME, Description = Protein ROS1, PFAM = PF15628)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf08533_81625-97522' '(at5g04560 : 549.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (reliability: 1098.0) & (original description: Putative DME, Description = Protein ROS1, PFAM = PF15628)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf09512_526397-533190' '(at1g01510 : 717.0) Encodes a homolog of human CtBP. Mutant has longer and thicker leaves than wild type. Involved in controlling polar cell expansion in the leaf width direction.; ANGUSTIFOLIA (AN); CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1); Has 20556 Blast hits to 20427 proteins in 2617 species: Archae - 372; Bacteria - 13694; Metazoa - 624; Fungi - 929; Plants - 529; Viruses - 5; Other Eukaryotes - 4403 (source: NCBI BLink). & (gnl|cdd|35290 : 224.0) no description available & (gnl|cdd|84741 : 142.0) no description available & (reliability: 1434.0) & (original description: Putative AN, Description = C-terminal binding protein AN, PFAM = PF02826)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf13036_195636-207578' '(at5g04560 : 689.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 96.8) no description available & (reliability: 1378.0) & (original description: Putative DME2, Description = DNA demethylase, PFAM = PF15628;PF15629)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf14076_52017-64261' '(at2g36490 : 684.0) A repressor of transcriptional gene silencing. Functions by demethylating the target promoter DNA. Interacts physically with RPA2/ROR1. In the ros1 mutants, an increase in methylation is observed in a number of gene promoters. Among the loci affected by ros1, a few (RD29A and At1g76930) are affected in cytosine methylation in all sequence contexts (CpG, CpNpG or CpNpN), although many others are affected primarily in non-CpG contexts.; demeter-like 1 (DML1); FUNCTIONS IN: protein binding, DNA N-glycosylase activity, DNA-(apurinic or apyrimidinic site) lyase activity; INVOLVED IN: DNA repair, chromatin silencing, negative regulation of chromatin silencing, DNA methylation, DNA demethylation; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: HhH-GPD base excision DNA repair family protein (TAIR:AT5G04560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30526 : 99.1) no description available & (reliability: 1362.0) & (original description: Putative pg3, Description = Transcriptional activator DEMETER, PFAM = PF15628;PF15629)' T '27.3.34' 'RNA.regulation of transcription.Orphan family' 'niben101scf21969_490-3773' '(at1g75520 : 206.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|68707 : 191.0) no description available & (reliability: 384.0) & (original description: Putative SRS7, Description = Protein SHI RELATED SEQUENCE 7, PFAM = PF05142)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold162_1463-33958' '(at1g05270 : 124.0) TraB family protein; CONTAINS InterPro DOMAIN/s: Pheromone shutdown-related, TraB (InterPro:IPR002816); BEST Arabidopsis thaliana protein match is: TraB family protein (TAIR:AT2G32340.1); Has 779 Blast hits to 750 proteins in 262 species: Archae - 153; Bacteria - 256; Metazoa - 121; Fungi - 0; Plants - 106; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative At2g32340, Description = TraB family protein, PFAM = )' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold1304_79825-83959' '(at3g58120 : 233.0) Encodes a member of the BZIP family of transcription factors. Forms heterodimers with the related protein AtbZIP34. Binds to G-boxes in vitro and is localized to the nucleus in onion epidermal cells.; BZIP61; FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G42380.2); Has 6780 Blast hits to 3763 proteins in 191 species: Archae - 2; Bacteria - 40; Metazoa - 267; Fungi - 154; Plants - 1186; Viruses - 2; Other Eukaryotes - 5129 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 84.7) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 466.0) & (original description: Putative BZIP61, Description = Basic leucine zipper 61, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold2708_67420-75209' '(at1g43700 : 173.0) Encodes a VirE2-interacting protein. VIP1 mediates nuclear translocation of VirE2 via its amino half, and interacts with histone H2A via it carboxyl half.; VIRE2-interacting protein 1 (VIP1); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to sulfate starvation, sulfate transport, DNA mediated transformation, nuclear import; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT1G06070.1); Has 1450 Blast hits to 1450 proteins in 153 species: Archae - 0; Bacteria - 51; Metazoa - 59; Fungi - 47; Plants - 1254; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 162.0) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 326.0) & (original description: Putative rsg, Description = BZIP transcriptional activator RSG, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold2708_68705-74703' '(at1g43700 : 139.0) Encodes a VirE2-interacting protein. VIP1 mediates nuclear translocation of VirE2 via its amino half, and interacts with histone H2A via it carboxyl half.; VIRE2-interacting protein 1 (VIP1); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to sulfate starvation, sulfate transport, DNA mediated transformation, nuclear import; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT1G06070.1); Has 1450 Blast hits to 1450 proteins in 153 species: Archae - 0; Bacteria - 51; Metazoa - 59; Fungi - 47; Plants - 1254; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 128.0) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 264.0) & (original description: Putative rsg, Description = BZIP transcription factor, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold7455_10926-14914' '(at1g35490 : 130.0) bZIP family transcription factor; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT1G58110.2); Has 455 Blast hits to 455 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 15; Fungi - 6; Plants - 414; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative PGSC0003DMG400009283, Description = Basic-leucine zipper domain-containing protein, PFAM = )' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold13017_2110-10193' '(q99090|cprf2_petcr : 318.0) Light-inducible protein CPRF-2 - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at5g28770 : 185.0) bZIP protein BZO2H3 mRNA, partial cds; BZO2H3; FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine zipper 25 (TAIR:AT3G54620.1); Has 2506 Blast hits to 2506 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 198; Fungi - 76; Plants - 2173; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (reliability: 370.0) & (original description: Putative CPRF2, Description = Light-inducible protein CPRF2, PFAM = PF12498;PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold16188_31147-36806' '(at1g58110 : 228.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding, protein dimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G06598.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative bZIP119, Description = BZIP transcription factor, PFAM = )' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold17747_19757-28471' '(o24160|tga21_tobac : 779.0) TGACG-sequence-specific DNA-binding protein TGA-2.1 (TGA2.1) - Nicotiana tabacum (Common tobacco) & (at3g12250 : 384.0) basic leucine zipper transcription factor involved in the activation of SA-responsive genes.; TGACG motif-binding factor 6 (TGA6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: systemic acquired resistance, response to xenobiotic stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G06950.4); Has 847 Blast hits to 847 proteins in 67 species: Archae - 0; Bacteria - 14; Metazoa - 4; Fungi - 0; Plants - 779; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 768.0) & (original description: Putative TGA21, Description = TGACG-sequence-specific DNA-binding protein TGA-2.1, PFAM = PF14144;PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold19521_1-8818' '(at5g44080 : 121.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 4 (TAIR:AT1G03970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative bzip2, Description = Basic-leucine zipper, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold20757_24432-26863' '(at3g62420 : 127.0) Encodes a group-S bZIP transcription factor. Forms heterodimers with group-C bZIP transcription factors. The heterodimers bind to the ACTCAT cis-element of proline dehydrogenase gene.; basic region/leucine zipper motif 53 (BZIP53); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 44 (TAIR:AT1G75390.1); Has 1452 Blast hits to 1450 proteins in 90 species: Archae - 2; Bacteria - 4; Metazoa - 13; Fungi - 3; Plants - 1410; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (p24068|ocs1_maize : 88.2) Ocs element-binding factor 1 (OCSBF-1) - Zea mays (Maize) & (reliability: 254.0) & (original description: Putative BZIP53, Description = bZIP transcription factor 53, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold26629_21456-25657' '(at2g16770 : 253.0) Basic-region leucine zipper (bZIP23) transcription factor involved in the adaptation to zinc deficiency. Binds ZDRE motifs.; bZIP23; FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to zinc ion, response to zinc ion; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT4G35040.1); Has 113 Blast hits to 112 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 14; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 480.0) & (original description: Putative BZIP19, Description = Basic leucine zipper 19, PFAM = PF07716)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold36685_2940-20900' '(at1g27000 : 263.0) Protein of unknown function (DUF1664); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1664 (InterPro:IPR012458); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1664) (TAIR:AT2G02730.2); Has 199 Blast hits to 190 proteins in 29 species: Archae - 0; Bacteria - 14; Metazoa - 2; Fungi - 2; Plants - 161; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|71327 : 154.0) no description available & (reliability: 526.0) & (original description: Putative bZIP108, Description = BZIP transcription factor bZIP108, PFAM = PF07889)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold38578_10366-17085' '(at1g68640 : 381.0) Encodes bZIP-transcription factor. Mutant plants have extra floral organs. PAN is essential for AG activation in early flowers of short-day-grown plants.; PERIANTHIA (PAN); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 6 (TAIR:AT3G12250.2); Has 796 Blast hits to 796 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 33; Plants - 710; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (q41558|hbp1c_wheat : 369.0) Transcription factor HBP-1b(c1) (Fragment) - Triticum aestivum (Wheat) & (reliability: 762.0) & (original description: Putative bZIP, Description = Transcription factor HBP-1b(C1), PFAM = PF00170;PF14144)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold55721_2053-5777' '(at2g17770 : 119.0) Encodes a paralog of bZIP transcription factor FD. This protein interacts with FD and FT.; basic region/leucine zipper motif 27 (BZIP27); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT4G35900.1). & (reliability: 226.0) & (original description: Putative FDP, Description = bZIP transcription factor 27, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold57733_2276-11736' '(at1g06070 : 332.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G31370.5); Has 39307 Blast hits to 17494 proteins in 873 species: Archae - 8; Bacteria - 1528; Metazoa - 14762; Fungi - 4294; Plants - 2852; Viruses - 384; Other Eukaryotes - 15479 (source: NCBI BLink). & (q69il4|rf2a_orysa : 240.0) Transcription factor RF2a - Oryza sativa (Rice) & (reliability: 664.0) & (original description: Putative POSF21, Description = Probable transcription factor PosF21, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold63865_1330-7105' '(at5g24800 : 143.0) Encodes bZIP protein BZO2H2.; basic leucine zipper 9 (BZIP9); FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616), Basic leucine-zipper, C-terminal (InterPro:IPR020983); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G28770.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative BZIP9, Description = Basic leucine zipper 9, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold75894_2066-5560' '(at2g36270 : 270.0) Encodes a member of the basic leucine zipper transcription factor family, involved in ABA signalling during seed maturation and germination. The Arabidopsis abscisic acid (ABA)-insensitive abi5 mutants have pleiotropic defects in ABA response, including decreased sensitivity to ABA inhibition of germination and altered expression of some ABA-regulated genes. Comparison of seed and ABA-inducible vegetative gene expression in wild-type and abi5-1 plants indicates that ABI5 regulates a subset of late embryogenesis-abundant genes during both developmental stages.; ABA INSENSITIVE 5 (ABI5); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.1); Has 3780 Blast hits to 3404 proteins in 335 species: Archae - 4; Bacteria - 363; Metazoa - 820; Fungi - 233; Plants - 1594; Viruses - 12; Other Eukaryotes - 754 (source: NCBI BLink). & (reliability: 540.0) & (original description: Putative ABI5, Description = Protein ABSCISIC ACID-INSENSITIVE 5, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold82647_1-6069' '(at1g58110 : 189.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding, protein dimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G06598.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative BnaA01g21580D, Description = BnaA01g21580D protein, PFAM = )' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.3scaffold100876_1-2666' '(at2g42380 : 253.0) Encodes a member of the BZIP family of transcription factors. Forms heterodimers with the related protein AtbZIP61. Binds to G-boxes in vitro and is localized to the nucleus in onion epidermal cells.; BZIP34; FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: male gametophyte, flower, carpel; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT3G58120.1); Has 10078 Blast hits to 4770 proteins in 174 species: Archae - 9; Bacteria - 38; Metazoa - 108; Fungi - 291; Plants - 1254; Viruses - 11; Other Eukaryotes - 8367 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 83.2) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 506.0) & (original description: Putative BZIP61, Description = Basic leucine zipper 61, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.5scaffold154_919136-924829' '(at1g06070 : 141.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G31370.5); Has 39307 Blast hits to 17494 proteins in 873 species: Archae - 8; Bacteria - 1528; Metazoa - 14762; Fungi - 4294; Plants - 2852; Viruses - 384; Other Eukaryotes - 15479 (source: NCBI BLink). & (q69il4|rf2a_orysa : 125.0) Transcription factor RF2a - Oryza sativa (Rice) & (reliability: 282.0) & (original description: Putative rsg, Description = BZIP transcription factor, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.5scaffold378_52050-59095' '(at1g03970 : 93.2) encodes a basic leucine zipper G-box binding factor that can bind to G-box motifs only as heterodimers with GBF2 or GBF3. A single amino acid change can confer G-box binding as homodimers.; G-box binding factor 4 (GBF4); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT5G44080.1); Has 1357 Blast hits to 1357 proteins in 128 species: Archae - 0; Bacteria - 6; Metazoa - 355; Fungi - 8; Plants - 931; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative bzip1, Description = Basic-leucine zipper, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.5scaffold464_828638-831938' '(at2g36270 : 204.0) Encodes a member of the basic leucine zipper transcription factor family, involved in ABA signalling during seed maturation and germination. The Arabidopsis abscisic acid (ABA)-insensitive abi5 mutants have pleiotropic defects in ABA response, including decreased sensitivity to ABA inhibition of germination and altered expression of some ABA-regulated genes. Comparison of seed and ABA-inducible vegetative gene expression in wild-type and abi5-1 plants indicates that ABI5 regulates a subset of late embryogenesis-abundant genes during both developmental stages.; ABA INSENSITIVE 5 (ABI5); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.1); Has 3780 Blast hits to 3404 proteins in 335 species: Archae - 4; Bacteria - 363; Metazoa - 820; Fungi - 233; Plants - 1594; Viruses - 12; Other Eukaryotes - 754 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative ABI5, Description = BZIP transcription factor ABI5, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.5scaffold1227_248700-254017' '(q99089|cprf1_petcr : 328.0) Common plant regulatory factor CPRF-1 - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at2g46270 : 235.0) encodes a bZIP G-box binding protein whose expression is induced by ABA. It has been shown to bind to Adh that contains the G-box and is induced by cold and water deprivation. GBF3 has been shown to be expressed mostly in the root and dark-grown leaves. GBF3 can act as homodimers and as heterodimers with GFB1, GBF2 and GBF4. In addition, GBF3°Øs DNA binding activity is enhanced by GIP1, GPRI1 and GPRI2.; G-box binding factor 3 (GBF3); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), G-box binding, MFMR (InterPro:IPR012900), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 2 (TAIR:AT4G01120.1); Has 2450 Blast hits to 2449 proteins in 240 species: Archae - 2; Bacteria - 73; Metazoa - 742; Fungi - 108; Plants - 1402; Viruses - 3; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|71217 : 178.0) no description available & (reliability: 470.0) & (original description: Putative CPRF1, Description = Common plant regulatory factor 1, PFAM = PF07777;PF00170;PF16596)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.5scaffold2348_226131-227710' '(at1g75390 : 124.0) basic leucine-zipper 44 (bZIP44); FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 6 (TAIR:AT4G34590.1); Has 1464 Blast hits to 1464 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 23; Plants - 1428; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative bZIP, Description = BZip, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.5scaffold4171_193204-202296' '(at1g43700 : 140.0) Encodes a VirE2-interacting protein. VIP1 mediates nuclear translocation of VirE2 via its amino half, and interacts with histone H2A via it carboxyl half.; VIRE2-interacting protein 1 (VIP1); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to sulfate starvation, sulfate transport, DNA mediated transformation, nuclear import; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT1G06070.1); Has 1450 Blast hits to 1450 proteins in 153 species: Archae - 0; Bacteria - 51; Metazoa - 59; Fungi - 47; Plants - 1254; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 125.0) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 260.0) & (original description: Putative rsg, Description = BZIP transcription factor, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'nbv0.5scaffold4232_12290-20373' '(q99090|cprf2_petcr : 321.0) Light-inducible protein CPRF-2 - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at5g28770 : 186.0) bZIP protein BZO2H3 mRNA, partial cds; BZO2H3; FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine zipper 25 (TAIR:AT3G54620.1); Has 2506 Blast hits to 2506 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 198; Fungi - 76; Plants - 2173; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative CPRF2, Description = Light-inducible protein CPRF2, PFAM = PF00170;PF12498)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00002773ctg004_3764-6591' '(p14232|tga1a_tobac : 408.0) TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a) (ASF-1 protein) - Nicotiana tabacum (Common tobacco) & (at5g65210 : 313.0) Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.; TGA1; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 4 (TAIR:AT5G10030.2); Has 674 Blast hits to 672 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 649; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 626.0) & (original description: Putative bZIP83, Description = Transcription factor bZIP83, PFAM = PF14144)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00003200ctg000_25708-29028' '(at1g05270 : 147.0) TraB family protein; CONTAINS InterPro DOMAIN/s: Pheromone shutdown-related, TraB (InterPro:IPR002816); BEST Arabidopsis thaliana protein match is: TraB family protein (TAIR:AT2G32340.1); Has 779 Blast hits to 750 proteins in 262 species: Archae - 153; Bacteria - 256; Metazoa - 121; Fungi - 0; Plants - 106; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative MTR_4g046663, Description = TraB family protein, PFAM = PF01963)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00003200ctg002_1756-14394' '(at1g05270 : 211.0) TraB family protein; CONTAINS InterPro DOMAIN/s: Pheromone shutdown-related, TraB (InterPro:IPR002816); BEST Arabidopsis thaliana protein match is: TraB family protein (TAIR:AT2G32340.1); Has 779 Blast hits to 750 proteins in 262 species: Archae - 153; Bacteria - 256; Metazoa - 121; Fungi - 0; Plants - 106; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|32100 : 84.5) no description available & (reliability: 422.0) & (original description: Putative At2g32340, Description = TraB family protein, PFAM = )' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00004531ctg009_1-8924' '(at5g44080 : 106.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 4 (TAIR:AT1G03970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative bzip2, Description = Basic-leucine zipper, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00011087ctg002_3520-9490' '(at1g68640 : 382.0) Encodes bZIP-transcription factor. Mutant plants have extra floral organs. PAN is essential for AG activation in early flowers of short-day-grown plants.; PERIANTHIA (PAN); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 6 (TAIR:AT3G12250.2); Has 796 Blast hits to 796 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 33; Plants - 710; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (q41558|hbp1c_wheat : 364.0) Transcription factor HBP-1b(c1) (Fragment) - Triticum aestivum (Wheat) & (reliability: 764.0) & (original description: Putative PAN, Description = Transcription factor PERIANTHIA, PFAM = PF14144;PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00011400ctg005_1-6123' '(at1g05270 : 288.0) TraB family protein; CONTAINS InterPro DOMAIN/s: Pheromone shutdown-related, TraB (InterPro:IPR002816); BEST Arabidopsis thaliana protein match is: TraB family protein (TAIR:AT2G32340.1); Has 779 Blast hits to 750 proteins in 262 species: Archae - 153; Bacteria - 256; Metazoa - 121; Fungi - 0; Plants - 106; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|32100 : 126.0) no description available & (gnl|cdd|38071 : 80.9) no description available & (reliability: 576.0) & (original description: Putative At2g32340, Description = TraB family protein, PFAM = PF01963)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00011493ctg001_3585-10575' '(at1g08320 : 292.0) bZIP transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G06839.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p23923|hbp1b_wheat : 206.0) Transcription factor HBP-1b(c38) - Triticum aestivum (Wheat) & (reliability: 584.0) & (original description: Putative bZIP, Description = Transcription factor HBP-1b(C1), PFAM = PF00170;PF14144)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00013515ctg003_187-4243' '(q41558|hbp1c_wheat : 284.0) Transcription factor HBP-1b(c1) (Fragment) - Triticum aestivum (Wheat) & (at3g12250 : 274.0) basic leucine zipper transcription factor involved in the activation of SA-responsive genes.; TGACG motif-binding factor 6 (TGA6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: systemic acquired resistance, response to xenobiotic stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G06950.4); Has 847 Blast hits to 847 proteins in 67 species: Archae - 0; Bacteria - 14; Metazoa - 4; Fungi - 0; Plants - 779; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 548.0) & (original description: Putative bZIP, Description = Transcription factor HBP-1b(C1), PFAM = PF14144)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00013636ctg017_178-4906' '(at4g38900 : 215.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G21230.1); Has 3605 Blast hits to 2736 proteins in 325 species: Archae - 8; Bacteria - 323; Metazoa - 540; Fungi - 250; Plants - 1223; Viruses - 1; Other Eukaryotes - 1260 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 105.0) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 430.0) & (original description: Putative rsg, Description = BZIP transcription factor, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00014247ctg009_12009-18362' '(q6s4p4|rf2b_orysa : 254.0) Transcription factor RF2b - Oryza sativa (Rice) & (at2g40620 : 247.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G31370.5); Has 1748 Blast hits to 1720 proteins in 178 species: Archae - 0; Bacteria - 19; Metazoa - 312; Fungi - 66; Plants - 1196; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (reliability: 494.0) & (original description: Putative RF2b, Description = Transcription factor RF2b, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00017213ctg009_1947-7234' '(at4g38900 : 311.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G21230.1); Has 3605 Blast hits to 2736 proteins in 325 species: Archae - 8; Bacteria - 323; Metazoa - 540; Fungi - 250; Plants - 1223; Viruses - 1; Other Eukaryotes - 1260 (source: NCBI BLink). & (q69il4|rf2a_orysa : 118.0) Transcription factor RF2a - Oryza sativa (Rice) & (reliability: 622.0) & (original description: Putative bZIP28, Description = BZIP transcription factor bZIP28, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00018112ctg014_5725-11437' '(at4g38900 : 206.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G21230.1); Has 3605 Blast hits to 2736 proteins in 325 species: Archae - 8; Bacteria - 323; Metazoa - 540; Fungi - 250; Plants - 1223; Viruses - 1; Other Eukaryotes - 1260 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 116.0) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 412.0) & (original description: Putative rsg, Description = BZIP transcription factor, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00029547ctg001_43540-45703' '(at3g14880 : 227.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT4G18650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative BnaCnng70220D, Description = BnaC05g38650D protein, PFAM = PF14144)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00030796ctg000_11722-13559' '(at1g75390 : 124.0) basic leucine-zipper 44 (bZIP44); FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 6 (TAIR:AT4G34590.1); Has 1464 Blast hits to 1464 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 23; Plants - 1428; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative bZIP, Description = BZip, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00031608ctg001_3120-9553' '(o24160|tga21_tobac : 327.0) TGACG-sequence-specific DNA-binding protein TGA-2.1 (TGA2.1) - Nicotiana tabacum (Common tobacco) & (at5g06950 : 317.0) Transcription factor of the B-ZIP family that has high affinity for C-box motifs. Interacts with NPR1 and may regulate PR gene expression. Phosphorylated by a CK2-like protein in vitro. Phosphorylation is enhanced by salicylic acid treatment.; AHBP-1B; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 6 (TAIR:AT3G12250.2); Has 882 Blast hits to 882 proteins in 71 species: Archae - 0; Bacteria - 9; Metazoa - 3; Fungi - 6; Plants - 812; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 634.0) & (original description: Putative TGA2, Description = Transcription factor TGA2, PFAM = PF14144)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00033418ctg003_3101-8668' '(gnl|cdd|68357 : 268.0) no description available & (at1g21740 : 217.0) Protein of unknown function (DUF630 and DUF632); INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT1G77500.1); Has 1513 Blast hits to 1244 proteins in 193 species: Archae - 7; Bacteria - 66; Metazoa - 463; Fungi - 80; Plants - 701; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink). & (reliability: 434.0) & (original description: Putative Sb02g031490, Description = Putative uncharacterized protein Sb02g031490, PFAM = PF04782;PF04783)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben044scf00056148ctg000_817-3666' '(at1g58110 : 133.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding, protein dimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G06598.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative bZIP17, Description = BZIP transcription factor family protein, PFAM = )' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00043_308082-310672' '(at3g30530 : 125.0) basic leucine-zipper 42 (bZIP42); FUNCTIONS IN: DNA binding, protein homodimerization activity, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 43 (TAIR:AT5G38800.1); Has 1669 Blast hits to 1669 proteins in 135 species: Archae - 0; Bacteria - 2; Metazoa - 133; Fungi - 19; Plants - 1463; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative bZIP35, Description = BZIP transcription factor bZIP35, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00077_854242-859080' '(p14233|tga1b_tobac : 392.0) TGACG-sequence-specific DNA-binding protein TGA-1B (TGA1b) (HSBF) (Fragment) - Nicotiana tabacum (Common tobacco) & (at2g40950 : 355.0) bZIP17 appears to regulate transcription as part of a salt and osmotic stress response. zip17 mutants show enhanced inhibition of primary root elongation in response to NaCl. Several salt-responsive genes, such as ATHB-7 show a reduced transcriptional response to a salt treatment in zip17 mutant seedlings. myc:bZIP17 undergoes proteolytic processing in salt-treated wild type seedlings, but not in s1p-3 (subtilase) mutants and there is also evidence for S1P-mediated cleavage of bZIP17 in vitro. In addition, an mGFP:bZIP17 protein moves from the ER to the nucleus following salt treatment.; BZIP17; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic region/leucine zipper motif protein 49 (TAIR:AT3G56660.1); Has 2042 Blast hits to 1979 proteins in 244 species: Archae - 0; Bacteria - 308; Metazoa - 517; Fungi - 244; Plants - 733; Viruses - 84; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 710.0) & (original description: Putative TGA1B, Description = TGACG-sequence-specific DNA-binding protein TGA-1B, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00212_137862-141128' '(at3g14880 : 203.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT4G18650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 406.0) & (original description: Putative BnaCnng70220D, Description = BnaC05g38650D protein, PFAM = PF14144)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00301_363759-371163' '(at5g06839 : 481.0) bZIP transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: leaf whorl, root, flower, seed; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT1G08320.3). & (o24160|tga21_tobac : 322.0) TGACG-sequence-specific DNA-binding protein TGA-2.1 (TGA2.1) - Nicotiana tabacum (Common tobacco) & (reliability: 962.0) & (original description: Putative bZIP, Description = BZIP protein, PFAM = PF00170;PF14144)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00383_439385-441816' '(at1g75390 : 115.0) basic leucine-zipper 44 (bZIP44); FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 6 (TAIR:AT4G34590.1); Has 1464 Blast hits to 1464 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 23; Plants - 1428; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative bZIP, Description = BZip, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00447_419525-425063' '(q99142|taf1_tobac : 392.0) Transcriptional activator TAF-1 (Fragment) - Nicotiana tabacum (Common tobacco) & (at2g46270 : 225.0) encodes a bZIP G-box binding protein whose expression is induced by ABA. It has been shown to bind to Adh that contains the G-box and is induced by cold and water deprivation. GBF3 has been shown to be expressed mostly in the root and dark-grown leaves. GBF3 can act as homodimers and as heterodimers with GFB1, GBF2 and GBF4. In addition, GBF3°Øs DNA binding activity is enhanced by GIP1, GPRI1 and GPRI2.; G-box binding factor 3 (GBF3); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), G-box binding, MFMR (InterPro:IPR012900), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 2 (TAIR:AT4G01120.1); Has 2450 Blast hits to 2449 proteins in 240 species: Archae - 2; Bacteria - 73; Metazoa - 742; Fungi - 108; Plants - 1402; Viruses - 3; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|71217 : 173.0) no description available & (reliability: 450.0) & (original description: Putative TAF1, Description = Transcriptional activator TAF-1, PFAM = PF16596;PF07777;PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00465_178252-185819' '(at1g68710 : 1835.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, phospholipid transport, ATP biosynthetic process; LOCATED IN: mitochondrion, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G26130.2); Has 13629 Blast hits to 12474 proteins in 1825 species: Archae - 135; Bacteria - 4718; Metazoa - 3129; Fungi - 2128; Plants - 1014; Viruses - 3; Other Eukaryotes - 2502 (source: NCBI BLink). & (gnl|cdd|35427 : 1554.0) no description available & (gnl|cdd|30822 : 433.0) no description available & (reliability: 3670.0) & (original description: Putative ALA9, Description = Putative phospholipid-transporting ATPase 9, PFAM = PF16209;PF13246;PF16212)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00466_410357-415635' '(at4g38900 : 312.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G21230.1); Has 3605 Blast hits to 2736 proteins in 325 species: Archae - 8; Bacteria - 323; Metazoa - 540; Fungi - 250; Plants - 1223; Viruses - 1; Other Eukaryotes - 1260 (source: NCBI BLink). & (q69il4|rf2a_orysa : 120.0) Transcription factor RF2a - Oryza sativa (Rice) & (reliability: 624.0) & (original description: Putative bZIP28, Description = BZIP transcription factor bZIP28, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00478_238080-248504' '(at5g24800 : 146.0) Encodes bZIP protein BZO2H2.; basic leucine zipper 9 (BZIP9); FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616), Basic leucine-zipper, C-terminal (InterPro:IPR020983); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G28770.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative BZIP9, Description = Basic leucine zipper 9, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00481_290961-299871' '(o24160|tga21_tobac : 787.0) TGACG-sequence-specific DNA-binding protein TGA-2.1 (TGA2.1) - Nicotiana tabacum (Common tobacco) & (at3g12250 : 388.0) basic leucine zipper transcription factor involved in the activation of SA-responsive genes.; TGACG motif-binding factor 6 (TGA6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: systemic acquired resistance, response to xenobiotic stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G06950.4); Has 847 Blast hits to 847 proteins in 67 species: Archae - 0; Bacteria - 14; Metazoa - 4; Fungi - 0; Plants - 779; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 776.0) & (original description: Putative TGA21, Description = TGACG-sequence-specific DNA-binding protein TGA-2.1, PFAM = PF00170;PF14144)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00508_953811-959095' '(at4g38900 : 248.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G21230.1); Has 3605 Blast hits to 2736 proteins in 325 species: Archae - 8; Bacteria - 323; Metazoa - 540; Fungi - 250; Plants - 1223; Viruses - 1; Other Eukaryotes - 1260 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 135.0) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 496.0) & (original description: Putative bZIP64, Description = BZIP transcription factor, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00525_537740-544458' '(at5g04840 : 197.0) bZIP protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT3G58120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative At5g04840, Description = At5g04840, PFAM = )' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00596_121417-132740' '(q41558|hbp1c_wheat : 385.0) Transcription factor HBP-1b(c1) (Fragment) - Triticum aestivum (Wheat) & (at3g12250 : 369.0) basic leucine zipper transcription factor involved in the activation of SA-responsive genes.; TGACG motif-binding factor 6 (TGA6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: systemic acquired resistance, response to xenobiotic stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G06950.4); Has 847 Blast hits to 847 proteins in 67 species: Archae - 0; Bacteria - 14; Metazoa - 4; Fungi - 0; Plants - 779; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 738.0) & (original description: Putative bZIP, Description = Transcription factor HBP-1b(C1), PFAM = PF00170;PF14144)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00679_345516-364590' '(at1g05270 : 411.0) TraB family protein; CONTAINS InterPro DOMAIN/s: Pheromone shutdown-related, TraB (InterPro:IPR002816); BEST Arabidopsis thaliana protein match is: TraB family protein (TAIR:AT2G32340.1); Has 779 Blast hits to 750 proteins in 262 species: Archae - 153; Bacteria - 256; Metazoa - 121; Fungi - 0; Plants - 106; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|32100 : 156.0) no description available & (gnl|cdd|38071 : 98.6) no description available & (reliability: 822.0) & (original description: Putative PGSC0003DMG400024333, Description = TraB family protein, PFAM = PF01963)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00773_589991-597203' '(at2g40620 : 235.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G31370.5); Has 1748 Blast hits to 1720 proteins in 178 species: Archae - 0; Bacteria - 19; Metazoa - 312; Fungi - 66; Plants - 1196; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 229.0) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 470.0) & (original description: Putative RF2b, Description = Transcription factor RF2b, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00959_138826-166152' '(at3g30530 : 129.0) basic leucine-zipper 42 (bZIP42); FUNCTIONS IN: DNA binding, protein homodimerization activity, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 43 (TAIR:AT5G38800.1); Has 1669 Blast hits to 1669 proteins in 135 species: Archae - 0; Bacteria - 2; Metazoa - 133; Fungi - 19; Plants - 1463; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative bZIP3, Description = BZIP transcription factor, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf00960_421102-425544' '(at5g65210 : 417.0) Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.; TGA1; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 4 (TAIR:AT5G10030.2); Has 674 Blast hits to 672 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 649; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (p14232|tga1a_tobac : 348.0) TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a) (ASF-1 protein) - Nicotiana tabacum (Common tobacco) & (reliability: 834.0) & (original description: Putative TGA1, Description = Transcription factor TGA1, PFAM = PF14144;PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf01002_120628-124762' '(at3g58120 : 225.0) Encodes a member of the BZIP family of transcription factors. Forms heterodimers with the related protein AtbZIP34. Binds to G-boxes in vitro and is localized to the nucleus in onion epidermal cells.; BZIP61; FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G42380.2); Has 6780 Blast hits to 3763 proteins in 191 species: Archae - 2; Bacteria - 40; Metazoa - 267; Fungi - 154; Plants - 1186; Viruses - 2; Other Eukaryotes - 5129 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 84.7) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 450.0) & (original description: Putative BZIP06, Description = Basic leucine zipper 6, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf01305_439686-449599' '(at1g27000 : 286.0) Protein of unknown function (DUF1664); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1664 (InterPro:IPR012458); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1664) (TAIR:AT2G02730.2); Has 199 Blast hits to 190 proteins in 29 species: Archae - 0; Bacteria - 14; Metazoa - 2; Fungi - 2; Plants - 161; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|71327 : 153.0) no description available & (reliability: 572.0) & (original description: Putative bZIP109, Description = BZIP transcription factor bZIP109, PFAM = PF07889)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf01607_369384-373749' '(at3g58120 : 244.0) Encodes a member of the BZIP family of transcription factors. Forms heterodimers with the related protein AtbZIP34. Binds to G-boxes in vitro and is localized to the nucleus in onion epidermal cells.; BZIP61; FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G42380.2); Has 6780 Blast hits to 3763 proteins in 191 species: Archae - 2; Bacteria - 40; Metazoa - 267; Fungi - 154; Plants - 1186; Viruses - 2; Other Eukaryotes - 5129 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 84.7) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 488.0) & (original description: Putative BZIP61, Description = Basic leucine zipper 61, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf01970_711889-717232' '(at1g58110 : 226.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding, protein dimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G06598.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative bZIP119, Description = BZIP transcription factor, PFAM = )' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf02360_148232-154317' '(at1g58110 : 224.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding, protein dimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G06598.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative BnaA01g21580D, Description = BnaA01g21580D protein, PFAM = )' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf02436_491299-518445' '(at1g27000 : 277.0) Protein of unknown function (DUF1664); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1664 (InterPro:IPR012458); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1664) (TAIR:AT2G02730.2); Has 199 Blast hits to 190 proteins in 29 species: Archae - 0; Bacteria - 14; Metazoa - 2; Fungi - 2; Plants - 161; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|71327 : 157.0) no description available & (reliability: 554.0) & (original description: Putative bZIP109, Description = BZIP transcription factor bZIP109, PFAM = PF07889)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf02510_238182-249660' '(at1g08320 : 465.0) bZIP transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G06839.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o24160|tga21_tobac : 322.0) TGACG-sequence-specific DNA-binding protein TGA-2.1 (TGA2.1) - Nicotiana tabacum (Common tobacco) & (reliability: 930.0) & (original description: Putative bZIP, Description = Transcription factor HBP-1b(C1), PFAM = PF00170;PF14144)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf02621_454092-458086' '(at2g16770 : 238.0) Basic-region leucine zipper (bZIP23) transcription factor involved in the adaptation to zinc deficiency. Binds ZDRE motifs.; bZIP23; FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to zinc ion, response to zinc ion; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT4G35040.1); Has 113 Blast hits to 112 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 14; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative BZIP23, Description = Basic leucine zipper 23, PFAM = PF07716)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf02694_307946-317586' '(at1g06070 : 334.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G31370.5); Has 39307 Blast hits to 17494 proteins in 873 species: Archae - 8; Bacteria - 1528; Metazoa - 14762; Fungi - 4294; Plants - 2852; Viruses - 384; Other Eukaryotes - 15479 (source: NCBI BLink). & (q69il4|rf2a_orysa : 240.0) Transcription factor RF2a - Oryza sativa (Rice) & (reliability: 668.0) & (original description: Putative POSF21, Description = Probable transcription factor PosF21, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf02738_509384-511923' '(at3g30530 : 127.0) basic leucine-zipper 42 (bZIP42); FUNCTIONS IN: DNA binding, protein homodimerization activity, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 43 (TAIR:AT5G38800.1); Has 1669 Blast hits to 1669 proteins in 135 species: Archae - 0; Bacteria - 2; Metazoa - 133; Fungi - 19; Plants - 1463; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative bZIP42, Description = Basic leucine-zipper 42, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf02835_7335-11580' '(at5g44080 : 93.6) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 4 (TAIR:AT1G03970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative bzip1, Description = G-box-binding factor 4, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf02864_219498-222010' '(at1g75390 : 112.0) basic leucine-zipper 44 (bZIP44); FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 6 (TAIR:AT4G34590.1); Has 1464 Blast hits to 1464 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 23; Plants - 1428; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative BZIP44, Description = bZIP transcription factor 44, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf02908_175364-180839' '(gnl|cdd|68357 : 270.0) no description available & (at1g21740 : 218.0) Protein of unknown function (DUF630 and DUF632); INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT1G77500.1); Has 1513 Blast hits to 1244 proteins in 193 species: Archae - 7; Bacteria - 66; Metazoa - 463; Fungi - 80; Plants - 701; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative Sb02g031490, Description = Putative uncharacterized protein Sb02g031490, PFAM = PF04782;PF04783)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf02917_53801-57500' '(at2g36270 : 300.0) Encodes a member of the basic leucine zipper transcription factor family, involved in ABA signalling during seed maturation and germination. The Arabidopsis abscisic acid (ABA)-insensitive abi5 mutants have pleiotropic defects in ABA response, including decreased sensitivity to ABA inhibition of germination and altered expression of some ABA-regulated genes. Comparison of seed and ABA-inducible vegetative gene expression in wild-type and abi5-1 plants indicates that ABI5 regulates a subset of late embryogenesis-abundant genes during both developmental stages.; ABA INSENSITIVE 5 (ABI5); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.1); Has 3780 Blast hits to 3404 proteins in 335 species: Archae - 4; Bacteria - 363; Metazoa - 820; Fungi - 233; Plants - 1594; Viruses - 12; Other Eukaryotes - 754 (source: NCBI BLink). & (reliability: 600.0) & (original description: Putative areb1, Description = Protein ABSCISIC ACID-INSENSITIVE 5, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf03494_531619-542515' '(at5g06839 : 488.0) bZIP transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: leaf whorl, root, flower, seed; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT1G08320.3). & (q41558|hbp1c_wheat : 318.0) Transcription factor HBP-1b(c1) (Fragment) - Triticum aestivum (Wheat) & (reliability: 976.0) & (original description: Putative bZIP, Description = BZIP protein, PFAM = PF07716;PF14144)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf03570_123303-131253' '(at1g06070 : 292.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G31370.5); Has 39307 Blast hits to 17494 proteins in 873 species: Archae - 8; Bacteria - 1528; Metazoa - 14762; Fungi - 4294; Plants - 2852; Viruses - 384; Other Eukaryotes - 15479 (source: NCBI BLink). & (q69il4|rf2a_orysa : 206.0) Transcription factor RF2a - Oryza sativa (Rice) & (reliability: 584.0) & (original description: Putative rsg, Description = BZIP transcription factor, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf03647_90963-95292' '(p14233|tga1b_tobac : 392.0) TGACG-sequence-specific DNA-binding protein TGA-1B (TGA1b) (HSBF) (Fragment) - Nicotiana tabacum (Common tobacco) & (at2g40950 : 337.0) bZIP17 appears to regulate transcription as part of a salt and osmotic stress response. zip17 mutants show enhanced inhibition of primary root elongation in response to NaCl. Several salt-responsive genes, such as ATHB-7 show a reduced transcriptional response to a salt treatment in zip17 mutant seedlings. myc:bZIP17 undergoes proteolytic processing in salt-treated wild type seedlings, but not in s1p-3 (subtilase) mutants and there is also evidence for S1P-mediated cleavage of bZIP17 in vitro. In addition, an mGFP:bZIP17 protein moves from the ER to the nucleus following salt treatment.; BZIP17; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic region/leucine zipper motif protein 49 (TAIR:AT3G56660.1); Has 2042 Blast hits to 1979 proteins in 244 species: Archae - 0; Bacteria - 308; Metazoa - 517; Fungi - 244; Plants - 733; Viruses - 84; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 674.0) & (original description: Putative TGA1B, Description = TGACG-sequence-specific DNA-binding protein TGA-1B, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf03693_803331-824147' '(at4g36730 : 184.0) member of a gene family encoding basic leucine zipper proteins (GBFs) which bind the G-box; G-box binding factor 1 (GBF1); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), G-box binding, MFMR (InterPro:IPR012900), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic region/leucine zipper transcription factor 16 (TAIR:AT2G35530.1); Has 3891 Blast hits to 3827 proteins in 347 species: Archae - 8; Bacteria - 109; Metazoa - 1441; Fungi - 440; Plants - 1415; Viruses - 137; Other Eukaryotes - 341 (source: NCBI BLink). & (gnl|cdd|71217 : 147.0) no description available & (q99091|cprf3_petcr : 122.0) Light-inducible protein CPRF-3 - Petroselinum crispum (Parsley) (Petroselinum hortense) & (reliability: 368.0) & (original description: Putative gbf3, Description = G-box binding factor bZIP transcription factor, PFAM = PF00170;PF07777)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf03830_223388-230891' '(at1g68640 : 379.0) Encodes bZIP-transcription factor. Mutant plants have extra floral organs. PAN is essential for AG activation in early flowers of short-day-grown plants.; PERIANTHIA (PAN); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 6 (TAIR:AT3G12250.2); Has 796 Blast hits to 796 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 33; Plants - 710; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (q41558|hbp1c_wheat : 367.0) Transcription factor HBP-1b(c1) (Fragment) - Triticum aestivum (Wheat) & (reliability: 758.0) & (original description: Putative PAN, Description = Transcription factor PERIANTHIA, PFAM = PF14144;PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf03851_70283-73391' '(at3g30530 : 114.0) basic leucine-zipper 42 (bZIP42); FUNCTIONS IN: DNA binding, protein homodimerization activity, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 43 (TAIR:AT5G38800.1); Has 1669 Blast hits to 1669 proteins in 135 species: Archae - 0; Bacteria - 2; Metazoa - 133; Fungi - 19; Plants - 1463; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative bZIP3, Description = Ocs element-binding factor 1, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf04240_250946-260980' '(at4g36730 : 197.0) member of a gene family encoding basic leucine zipper proteins (GBFs) which bind the G-box; G-box binding factor 1 (GBF1); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), G-box binding, MFMR (InterPro:IPR012900), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic region/leucine zipper transcription factor 16 (TAIR:AT2G35530.1); Has 3891 Blast hits to 3827 proteins in 347 species: Archae - 8; Bacteria - 109; Metazoa - 1441; Fungi - 440; Plants - 1415; Viruses - 137; Other Eukaryotes - 341 (source: NCBI BLink). & (gnl|cdd|71217 : 144.0) no description available & (q99091|cprf3_petcr : 130.0) Light-inducible protein CPRF-3 - Petroselinum crispum (Parsley) (Petroselinum hortense) & (reliability: 394.0) & (original description: Putative gbf3, Description = G-box binding factor bZIP transcription factor, PFAM = PF00170;PF07777)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf04375_1277293-1280150' '(at3g14880 : 136.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT4G18650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative TaDOG1L1, Description = Putative uncharacterized protein TaDOG1L1, PFAM = PF14144)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf04430_493806-496381' '(at3g30530 : 124.0) basic leucine-zipper 42 (bZIP42); FUNCTIONS IN: DNA binding, protein homodimerization activity, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 43 (TAIR:AT5G38800.1); Has 1669 Blast hits to 1669 proteins in 135 species: Archae - 0; Bacteria - 2; Metazoa - 133; Fungi - 19; Plants - 1463; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative BZIP43, Description = Basic leucine zipper 43, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf04473_670800-673225' '(at3g62420 : 96.7) Encodes a group-S bZIP transcription factor. Forms heterodimers with group-C bZIP transcription factors. The heterodimers bind to the ACTCAT cis-element of proline dehydrogenase gene.; basic region/leucine zipper motif 53 (BZIP53); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 44 (TAIR:AT1G75390.1); Has 1452 Blast hits to 1450 proteins in 90 species: Archae - 2; Bacteria - 4; Metazoa - 13; Fungi - 3; Plants - 1410; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative abz1, Description = Anaerobic basic leucine zipper protein, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf04528_48074-50621' '(at3g14880 : 150.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT4G18650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative PGSC0003DMG400007068, Description = Tumor-related protein-like, PFAM = PF14144)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf04614_698762-702355' '(at1g35490 : 132.0) bZIP family transcription factor; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT1G58110.2); Has 455 Blast hits to 455 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 15; Fungi - 6; Plants - 414; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative bZIP50, Description = Transcription factor RF2a, PFAM = )' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf04819_404006-406440' '(at3g62420 : 126.0) Encodes a group-S bZIP transcription factor. Forms heterodimers with group-C bZIP transcription factors. The heterodimers bind to the ACTCAT cis-element of proline dehydrogenase gene.; basic region/leucine zipper motif 53 (BZIP53); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 44 (TAIR:AT1G75390.1); Has 1452 Blast hits to 1450 proteins in 90 species: Archae - 2; Bacteria - 4; Metazoa - 13; Fungi - 3; Plants - 1410; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative BZIP53, Description = bZIP transcription factor 53, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf05201_609499-629222' '(q41558|hbp1c_wheat : 373.0) Transcription factor HBP-1b(c1) (Fragment) - Triticum aestivum (Wheat) & (at5g06950 : 355.0) Transcription factor of the B-ZIP family that has high affinity for C-box motifs. Interacts with NPR1 and may regulate PR gene expression. Phosphorylated by a CK2-like protein in vitro. Phosphorylation is enhanced by salicylic acid treatment.; AHBP-1B; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 6 (TAIR:AT3G12250.2); Has 882 Blast hits to 882 proteins in 71 species: Archae - 0; Bacteria - 9; Metazoa - 3; Fungi - 6; Plants - 812; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 710.0) & (original description: Putative bZIP, Description = Transcription factor HBP-1b(C1), PFAM = PF00170;PF14144)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf05304_131310-142902' '(at1g21740 : 516.0) Protein of unknown function (DUF630 and DUF632); INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT1G77500.1); Has 1513 Blast hits to 1244 proteins in 193 species: Archae - 7; Bacteria - 66; Metazoa - 463; Fungi - 80; Plants - 701; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink). & (gnl|cdd|68357 : 295.0) no description available & (reliability: 1032.0) & (original description: Putative BnaA06g15490D, Description = BnaA06g15490D protein, PFAM = PF04783;PF04782)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf05310_471222-482916' '(at1g58110 : 230.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding, protein dimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G06598.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative bZIP119, Description = BZIP transcription factor, PFAM = )' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf05430_3732-13061' '(at5g44080 : 125.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 4 (TAIR:AT1G03970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative bzip2, Description = Basic-leucine zipper, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf05491_261574-269266' '(at1g08320 : 500.0) bZIP transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G06839.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o24160|tga21_tobac : 315.0) TGACG-sequence-specific DNA-binding protein TGA-2.1 (TGA2.1) - Nicotiana tabacum (Common tobacco) & (reliability: 1000.0) & (original description: Putative bZIP, Description = BZIP protein, PFAM = PF00170;PF14144)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf05584_268426-273743' '(q99089|cprf1_petcr : 315.0) Common plant regulatory factor CPRF-1 - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at2g46270 : 211.0) encodes a bZIP G-box binding protein whose expression is induced by ABA. It has been shown to bind to Adh that contains the G-box and is induced by cold and water deprivation. GBF3 has been shown to be expressed mostly in the root and dark-grown leaves. GBF3 can act as homodimers and as heterodimers with GFB1, GBF2 and GBF4. In addition, GBF3°Øs DNA binding activity is enhanced by GIP1, GPRI1 and GPRI2.; G-box binding factor 3 (GBF3); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), G-box binding, MFMR (InterPro:IPR012900), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 2 (TAIR:AT4G01120.1); Has 2450 Blast hits to 2449 proteins in 240 species: Archae - 2; Bacteria - 73; Metazoa - 742; Fungi - 108; Plants - 1402; Viruses - 3; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|71217 : 150.0) no description available & (reliability: 422.0) & (original description: Putative CPRF1, Description = Common plant regulatory factor 1, PFAM = PF07777;PF16596;PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf05690_190871-193380' '(at1g75390 : 131.0) basic leucine-zipper 44 (bZIP44); FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 6 (TAIR:AT4G34590.1); Has 1464 Blast hits to 1464 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 23; Plants - 1428; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative bZIP, Description = BZip, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf05845_279187-302050' '(q99090|cprf2_petcr : 324.0) Light-inducible protein CPRF-2 - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at5g28770 : 179.0) bZIP protein BZO2H3 mRNA, partial cds; BZO2H3; FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine zipper 25 (TAIR:AT3G54620.1); Has 2506 Blast hits to 2506 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 198; Fungi - 76; Plants - 2173; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative CPRF2, Description = Light-inducible protein CPRF2, PFAM = PF12498;PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf05988_495954-514501' '(at1g27000 : 189.0) Protein of unknown function (DUF1664); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1664 (InterPro:IPR012458); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1664) (TAIR:AT2G02730.2); Has 199 Blast hits to 190 proteins in 29 species: Archae - 0; Bacteria - 14; Metazoa - 2; Fungi - 2; Plants - 161; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|71327 : 157.0) no description available & (reliability: 378.0) & (original description: Putative IDP96, Description = BZIP transcription factor bZIP108, PFAM = PF07889)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf06094_820597-833509' '(at1g05270 : 321.0) TraB family protein; CONTAINS InterPro DOMAIN/s: Pheromone shutdown-related, TraB (InterPro:IPR002816); BEST Arabidopsis thaliana protein match is: TraB family protein (TAIR:AT2G32340.1); Has 779 Blast hits to 750 proteins in 262 species: Archae - 153; Bacteria - 256; Metazoa - 121; Fungi - 0; Plants - 106; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|32100 : 152.0) no description available & (gnl|cdd|38071 : 99.0) no description available & (reliability: 642.0) & (original description: Putative PHYPADRAFT_4363, Description = Predicted protein, PFAM = PF01963)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf06106_159445-162224' '(at2g16770 : 268.0) Basic-region leucine zipper (bZIP23) transcription factor involved in the adaptation to zinc deficiency. Binds ZDRE motifs.; bZIP23; FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to zinc ion, response to zinc ion; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT4G35040.1); Has 113 Blast hits to 112 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 14; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 510.0) & (original description: Putative bZIP108, Description = Basic-leucine zipper (BZIP) transcription factor family, PFAM = PF07716)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf06376_518409-521762' '(at2g17770 : 92.4) Encodes a paralog of bZIP transcription factor FD. This protein interacts with FD and FT.; basic region/leucine zipper motif 27 (BZIP27); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT4G35900.1). & (reliability: 176.4) & (original description: Putative SPGB, Description = Self-pruning G-box protein, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf07465_115219-120982' '(at4g38900 : 243.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G21230.1); Has 3605 Blast hits to 2736 proteins in 325 species: Archae - 8; Bacteria - 323; Metazoa - 540; Fungi - 250; Plants - 1223; Viruses - 1; Other Eukaryotes - 1260 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 154.0) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 486.0) & (original description: Putative rsg, Description = BZIP transcription factor, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf07614_71183-73980' '(at2g16770 : 266.0) Basic-region leucine zipper (bZIP23) transcription factor involved in the adaptation to zinc deficiency. Binds ZDRE motifs.; bZIP23; FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to zinc ion, response to zinc ion; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT4G35040.1); Has 113 Blast hits to 112 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 14; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 518.0) & (original description: Putative BZIP23, Description = Basic leucine zipper 23, PFAM = PF07716)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf07778_491659-495346' '(at2g36270 : 300.0) Encodes a member of the basic leucine zipper transcription factor family, involved in ABA signalling during seed maturation and germination. The Arabidopsis abscisic acid (ABA)-insensitive abi5 mutants have pleiotropic defects in ABA response, including decreased sensitivity to ABA inhibition of germination and altered expression of some ABA-regulated genes. Comparison of seed and ABA-inducible vegetative gene expression in wild-type and abi5-1 plants indicates that ABI5 regulates a subset of late embryogenesis-abundant genes during both developmental stages.; ABA INSENSITIVE 5 (ABI5); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.1); Has 3780 Blast hits to 3404 proteins in 335 species: Archae - 4; Bacteria - 363; Metazoa - 820; Fungi - 233; Plants - 1594; Viruses - 12; Other Eukaryotes - 754 (source: NCBI BLink). & (reliability: 600.0) & (original description: Putative ABI5, Description = Protein ABSCISIC ACID-INSENSITIVE 5, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf07883_279800-283729' '(at2g42380 : 248.0) Encodes a member of the BZIP family of transcription factors. Forms heterodimers with the related protein AtbZIP61. Binds to G-boxes in vitro and is localized to the nucleus in onion epidermal cells.; BZIP34; FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: male gametophyte, flower, carpel; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT3G58120.1); Has 10078 Blast hits to 4770 proteins in 174 species: Archae - 9; Bacteria - 38; Metazoa - 108; Fungi - 291; Plants - 1254; Viruses - 11; Other Eukaryotes - 8367 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 84.0) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 496.0) & (original description: Putative BZIP61, Description = Basic leucine zipper 61, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf07926_416831-423500' '(p14232|tga1a_tobac : 498.0) TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a) (ASF-1 protein) - Nicotiana tabacum (Common tobacco) & (at5g65210 : 391.0) Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.; TGA1; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 4 (TAIR:AT5G10030.2); Has 674 Blast hits to 672 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 649; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 782.0) & (original description: Putative TGA1A, Description = TGACG-sequence-specific DNA-binding protein TGA-1A, PFAM = PF00170;PF14144)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf08078_340587-346334' '(at4g38900 : 208.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G21230.1); Has 3605 Blast hits to 2736 proteins in 325 species: Archae - 8; Bacteria - 323; Metazoa - 540; Fungi - 250; Plants - 1223; Viruses - 1; Other Eukaryotes - 1260 (source: NCBI BLink). & (q69il4|rf2a_orysa : 104.0) Transcription factor RF2a - Oryza sativa (Rice) & (reliability: 416.0) & (original description: Putative rsg, Description = BZIP transcription factor, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf08127_727840-730415' '(at3g30530 : 120.0) basic leucine-zipper 42 (bZIP42); FUNCTIONS IN: DNA binding, protein homodimerization activity, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 43 (TAIR:AT5G38800.1); Has 1669 Blast hits to 1669 proteins in 135 species: Archae - 0; Bacteria - 2; Metazoa - 133; Fungi - 19; Plants - 1463; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative bZIP35, Description = BZIP transcription factor bZIP35, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf08127_1242124-1249022' '(at1g68710 : 1842.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, phospholipid transport, ATP biosynthetic process; LOCATED IN: mitochondrion, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G26130.2); Has 13629 Blast hits to 12474 proteins in 1825 species: Archae - 135; Bacteria - 4718; Metazoa - 3129; Fungi - 2128; Plants - 1014; Viruses - 3; Other Eukaryotes - 2502 (source: NCBI BLink). & (gnl|cdd|35427 : 1575.0) no description available & (gnl|cdd|30822 : 420.0) no description available & (q6atv4|aca2_orysa : 82.8) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (reliability: 3684.0) & (original description: Putative ALA9, Description = Putative phospholipid-transporting ATPase 9, PFAM = PF16212;PF13246;PF16209)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf08814_47275-48840' '(at1g75390 : 125.0) basic leucine-zipper 44 (bZIP44); FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 6 (TAIR:AT4G34590.1); Has 1464 Blast hits to 1464 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 23; Plants - 1428; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative bZIP, Description = BZip, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf08973_20694-26934' '(p14232|tga1a_tobac : 631.0) TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a) (ASF-1 protein) - Nicotiana tabacum (Common tobacco) & (at5g65210 : 424.0) Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.; TGA1; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 4 (TAIR:AT5G10030.2); Has 674 Blast hits to 672 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 649; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 848.0) & (original description: Putative TGA1A, Description = TGACG-sequence-specific DNA-binding protein TGA-1A, PFAM = PF14144;PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf09716_288827-295440' '(at1g68640 : 378.0) Encodes bZIP-transcription factor. Mutant plants have extra floral organs. PAN is essential for AG activation in early flowers of short-day-grown plants.; PERIANTHIA (PAN); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 6 (TAIR:AT3G12250.2); Has 796 Blast hits to 796 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 33; Plants - 710; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (q41558|hbp1c_wheat : 353.0) Transcription factor HBP-1b(c1) (Fragment) - Triticum aestivum (Wheat) & (reliability: 756.0) & (original description: Putative bZIP, Description = Transcription factor HBP-1b(C1), PFAM = PF00170;PF14144)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf11480_351687-354100' '(at3g62420 : 97.1) Encodes a group-S bZIP transcription factor. Forms heterodimers with group-C bZIP transcription factors. The heterodimers bind to the ACTCAT cis-element of proline dehydrogenase gene.; basic region/leucine zipper motif 53 (BZIP53); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 44 (TAIR:AT1G75390.1); Has 1452 Blast hits to 1450 proteins in 90 species: Archae - 2; Bacteria - 4; Metazoa - 13; Fungi - 3; Plants - 1410; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative abz1, Description = Anaerobic basic leucine zipper protein, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf13047_13288-24662' '(at1g08320 : 468.0) bZIP transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G06839.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o24160|tga21_tobac : 311.0) TGACG-sequence-specific DNA-binding protein TGA-2.1 (TGA2.1) - Nicotiana tabacum (Common tobacco) & (reliability: 936.0) & (original description: Putative bZIP, Description = BZIP protein, PFAM = PF00170;PF14144)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf13168_106469-111611' '(at5g65210 : 384.0) Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.; TGA1; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 4 (TAIR:AT5G10030.2); Has 674 Blast hits to 672 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 649; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (p14232|tga1a_tobac : 327.0) TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a) (ASF-1 protein) - Nicotiana tabacum (Common tobacco) & (reliability: 768.0) & (original description: Putative TGA1, Description = Transcription factor TGA1, PFAM = PF00170;PF14144)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf13556_57081-59743' '(at2g22850 : 106.0) basic leucine-zipper 6 (bZIP6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 7 (TAIR:AT4G37730.1). & (reliability: 212.0) & (original description: Putative bZIP14, Description = BZIP transcription factor 14, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf13865_38374-60555' '(at2g35530 : 357.0) Encodes a G group bZIP transcription factor family member that can bind cis elements with an ACGT core, such as G-box, Hex, C-box and As-1. The protein is localized in the nucleus and can homodimerize and can heterodimerize with other G group members.; basic region/leucine zipper transcription factor 16 (bZIP16); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), G-box binding, MFMR (InterPro:IPR012900), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic region/leucine zipper transcription factor 68 (TAIR:AT1G32150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p23922|hbp1a_wheat : 175.0) Transcription factor HBP-1a (Histone-specific transcription factor HBP1) - Triticum aestivum (Wheat) & (gnl|cdd|71217 : 168.0) no description available & (reliability: 714.0) & (original description: Putative gbf3, Description = G-box binding factor bZIP transcription factor, PFAM = PF16596;PF07777;PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf14115_214136-223133' '(at2g35530 : 321.0) Encodes a G group bZIP transcription factor family member that can bind cis elements with an ACGT core, such as G-box, Hex, C-box and As-1. The protein is localized in the nucleus and can homodimerize and can heterodimerize with other G group members.; basic region/leucine zipper transcription factor 16 (bZIP16); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), G-box binding, MFMR (InterPro:IPR012900), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic region/leucine zipper transcription factor 68 (TAIR:AT1G32150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|71217 : 171.0) no description available & (p23922|hbp1a_wheat : 151.0) Transcription factor HBP-1a (Histone-specific transcription factor HBP1) - Triticum aestivum (Wheat) & (reliability: 642.0) & (original description: Putative BZIP16, Description = bZIP transcription factor 16, PFAM = PF07777;PF00170;PF16596)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf15744_9583-15983' '(at5g11260 : 87.8) Basic leucine zipper (bZIP) transcription factor. Nuclear localization. Involved in light-regulated transcriptional activation of G-box-containing promoters. Negatively regulated by Cop1. Although cytokinins do not appear to affect the gene's promoter activity, they appear to stabilize the protein. HY5 plays a role in anthocyanin accumulation in far-red light and blue light, but not in red light or in the dark. Mutant studies showed that the gene product is involved in the positive regulation of the PHYA-mediated inhibition of hypocotyl elongation. Binds to G- and Z-boxes, and other ACEs, but not to E-box. Loss of function mutation shows ABA resistant seedling phenotypes suggesting involvement for HY5 in mediating ABA responses. Binds to the promoter of ABI5 and regulates its expression.; ELONGATED HYPOCOTYL 5 (HY5); FUNCTIONS IN: double-stranded DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 13 processes; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616), cAMP response element binding (CREB) protein (InterPro:IPR001630); BEST Arabidopsis thaliana protein match is: HY5-homolog (TAIR:AT3G17609.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative HY5, Description = Transcription factor HY5, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf16582_6119-8550' '(at3g62420 : 126.0) Encodes a group-S bZIP transcription factor. Forms heterodimers with group-C bZIP transcription factors. The heterodimers bind to the ACTCAT cis-element of proline dehydrogenase gene.; basic region/leucine zipper motif 53 (BZIP53); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 44 (TAIR:AT1G75390.1); Has 1452 Blast hits to 1450 proteins in 90 species: Archae - 2; Bacteria - 4; Metazoa - 13; Fungi - 3; Plants - 1410; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (p24068|ocs1_maize : 93.2) Ocs element-binding factor 1 (OCSBF-1) - Zea mays (Maize) & (reliability: 252.0) & (original description: Putative BZIP53, Description = bZIP transcription factor 53, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf18662_12787-17273' '(at4g38900 : 345.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G21230.1); Has 3605 Blast hits to 2736 proteins in 325 species: Archae - 8; Bacteria - 323; Metazoa - 540; Fungi - 250; Plants - 1223; Viruses - 1; Other Eukaryotes - 1260 (source: NCBI BLink). & (q69il4|rf2a_orysa : 127.0) Transcription factor RF2a - Oryza sativa (Rice) & (reliability: 690.0) & (original description: Putative bZIP28, Description = BZIP transcription factor bZIP28, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf20887_28737-41818' '(q6s4p4|rf2b_orysa : 250.0) Transcription factor RF2b - Oryza sativa (Rice) & (at2g40620 : 249.0) Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G31370.5); Has 1748 Blast hits to 1720 proteins in 178 species: Archae - 0; Bacteria - 19; Metazoa - 312; Fungi - 66; Plants - 1196; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative RF2b, Description = Transcription factor RF2b, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf24096_86218-90261' '(at1g42990 : 85.9) AtbZIP60 consists of a bZIP DNA binding domain followed by a putative transmembrane domain. GFP fusions containing the first 260 amino acids (AtbZIP60deltaC) are nuclear-localized. AtbZIP60 is upregulated by the addition of tunicamycin (ER stress response inductor), DTT (inhibitor of disulfide bond formation) and azetin-2-carboxylate (proline analog perturbing protein structure). Upon ER stress the protein is proteolyzed and the soluble part is translocalized into the nucleus. AtbZIP60deltaC can activate the promoters of the ER chaperones BiP1, BiP2 and BiP3 and CNX1 and CNX2 via binding to the ER stress response element (ERSE) and the plant unfolded protein response element(P-UPRE). It can also activate its own transcription.; basic region/leucine zipper motif 60 (BZIP60); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G40950.1); Has 974 Blast hits to 974 proteins in 146 species: Archae - 0; Bacteria - 28; Metazoa - 334; Fungi - 54; Plants - 487; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative bZIP1, Description = BZIP transcription factor protein, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf24848_88093-95603' '(at1g03970 : 104.0) encodes a basic leucine zipper G-box binding factor that can bind to G-box motifs only as heterodimers with GBF2 or GBF3. A single amino acid change can confer G-box binding as homodimers.; G-box binding factor 4 (GBF4); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT5G44080.1); Has 1357 Blast hits to 1357 proteins in 128 species: Archae - 0; Bacteria - 6; Metazoa - 355; Fungi - 8; Plants - 931; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative bzip1, Description = Basic-leucine zipper, PFAM = PF00170)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf30320_53912-63278' '(q99090|cprf2_petcr : 318.0) Light-inducible protein CPRF-2 - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at5g28770 : 185.0) bZIP protein BZO2H3 mRNA, partial cds; BZO2H3; FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine zipper 25 (TAIR:AT3G54620.1); Has 2506 Blast hits to 2506 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 198; Fungi - 76; Plants - 2173; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (reliability: 370.0) & (original description: Putative CPRF2, Description = Light-inducible protein CPRF2, PFAM = PF00170;PF12498)' T '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'niben101scf32851_84105-88805' '(at2g40950 : 367.0) bZIP17 appears to regulate transcription as part of a salt and osmotic stress response. zip17 mutants show enhanced inhibition of primary root elongation in response to NaCl. Several salt-responsive genes, such as ATHB-7 show a reduced transcriptional response to a salt treatment in zip17 mutant seedlings. myc:bZIP17 undergoes proteolytic processing in salt-treated wild type seedlings, but not in s1p-3 (subtilase) mutants and there is also evidence for S1P-mediated cleavage of bZIP17 in vitro. In addition, an mGFP:bZIP17 protein moves from the ER to the nucleus following salt treatment.; BZIP17; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic region/leucine zipper motif protein 49 (TAIR:AT3G56660.1); Has 2042 Blast hits to 1979 proteins in 244 species: Archae - 0; Bacteria - 308; Metazoa - 517; Fungi - 244; Plants - 733; Viruses - 84; Other Eukaryotes - 156 (source: NCBI BLink). & (p14233|tga1b_tobac : 169.0) TGACG-sequence-specific DNA-binding protein TGA-1B (TGA1b) (HSBF) (Fragment) - Nicotiana tabacum (Common tobacco) & (reliability: 734.0) & (original description: Putative BZIP17, Description = bZIP transcription factor 17, PFAM = PF00170)' T '27.3.36' 'RNA.regulation of transcription.Argonaute' 'nbv0.5scaffold7232_79076-87011' '(at2g32940 : 999.0) Encodes a nuclear localized 879-amino-acid protein that contains conserved PAZ and PIWI domains that is important for the accumulation of specific heterochromatin-related siRNAs, and for DNA methylation and transcriptional gene silencing.; ARGONAUTE 6 (AGO6); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Argonaute/Dicer protein, PAZ (InterPro:IPR003100); BEST Arabidopsis thaliana protein match is: Argonaute family protein (TAIR:AT5G21150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36259 : 652.0) no description available & (gnl|cdd|72942 : 431.0) no description available & (reliability: 1996.0) & (original description: Putative AGO6, Description = Protein argonaute 6, PFAM = PF08699;PF02170;PF16488;PF02171;PF16486)' T '27.3.36' 'RNA.regulation of transcription.Argonaute' 'niben044scf00032670ctg008_12576-19103' '(at2g27040 : 762.0) AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens.; ARGONAUTE 4 (AGO4); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Argonaute family protein (TAIR:AT5G21150.1). & (gnl|cdd|36259 : 492.0) no description available & (gnl|cdd|72942 : 322.0) no description available & (reliability: 1524.0) & (original description: Putative AGO4, Description = Eukaryotic translation initiation factor 2c, putative, PFAM = PF02170;PF08699;PF16486;PF02171;PF02171)' T '27.3.36' 'RNA.regulation of transcription.Argonaute' 'niben101scf02159_82429-89655' '(at2g27040 : 793.0) AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens.; ARGONAUTE 4 (AGO4); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Argonaute family protein (TAIR:AT5G21150.1). & (gnl|cdd|36259 : 519.0) no description available & (gnl|cdd|72942 : 352.0) no description available & (reliability: 1586.0) & (original description: Putative AGO4, Description = Eukaryotic translation initiation factor 2c, putative, PFAM = PF02170;PF08699;PF16486;PF02171)' T '27.3.36' 'RNA.regulation of transcription.Argonaute' 'niben101scf02159_82686-89392' '(at2g27040 : 831.0) AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens.; ARGONAUTE 4 (AGO4); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Argonaute family protein (TAIR:AT5G21150.1). & (gnl|cdd|36259 : 554.0) no description available & (gnl|cdd|72942 : 381.0) no description available & (reliability: 1662.0) & (original description: Putative AGO4B, Description = Protein argonaute 4B, PFAM = PF16488;PF16486;PF02170;PF02171;PF08699)' T '27.3.36' 'RNA.regulation of transcription.Argonaute' 'niben101scf05519_103447-111964' '(at2g27040 : 1403.0) AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens.; ARGONAUTE 4 (AGO4); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Argonaute family protein (TAIR:AT5G21150.1). & (gnl|cdd|36259 : 756.0) no description available & (gnl|cdd|72942 : 469.0) no description available & (reliability: 2806.0) & (original description: Putative AGO4, Description = Protein argonaute 4, PFAM = PF16488;PF16486;PF02170;PF02171;PF08699)' T '27.3.36' 'RNA.regulation of transcription.Argonaute' 'niben101scf07937_279872-291299' '(at2g27040 : 1393.0) AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens.; ARGONAUTE 4 (AGO4); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Argonaute family protein (TAIR:AT5G21150.1). & (gnl|cdd|36259 : 756.0) no description available & (gnl|cdd|72942 : 464.0) no description available & (reliability: 2786.0) & (original description: Putative AGO8, Description = Protein argonaute 8, PFAM = PF16486;PF02170;PF02171;PF16487;PF16488;PF08699)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.3scaffold6076_57672-61045' '(at3g13850 : 165.0) LOB domain-containing protein 22 (LBD22); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 7 (TAIR:AT1G72980.1); Has 841 Blast hits to 836 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 839; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 131.0) no description available & (reliability: 330.0) & (original description: Putative ASL29, Description = LOB domain-containing protein 22, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.3scaffold7988_34760-39170' '(at2g28500 : 182.0) LOB domain-containing protein 11 (LBD11); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 1 (TAIR:AT1G07900.1); Has 1191 Blast hits to 1170 proteins in 85 species: Archae - 8; Bacteria - 66; Metazoa - 21; Fungi - 2; Plants - 1049; Viruses - 10; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|66843 : 160.0) no description available & (reliability: 364.0) & (original description: Putative LBD1, Description = LOB domain-containing protein 1, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.3scaffold11371_17910-21298' '(at2g42430 : 169.0) LOB-domain protein gene LBD16. This gene contains one auxin-responsive element (AuxRE).; lateral organ boundaries-domain 16 (LBD16); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: lateral organ boundaries-domain 29 (TAIR:AT3G58190.1); Has 917 Blast hits to 912 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 917; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 156.0) no description available & (reliability: 338.0) & (original description: Putative LBD16, Description = LOB domain-containing protein 16, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.3scaffold13808_20179-23665' '(at2g42430 : 157.0) LOB-domain protein gene LBD16. This gene contains one auxin-responsive element (AuxRE).; lateral organ boundaries-domain 16 (LBD16); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: lateral organ boundaries-domain 29 (TAIR:AT3G58190.1); Has 917 Blast hits to 912 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 917; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 156.0) no description available & (reliability: 314.0) & (original description: Putative AS2, Description = LOB domain protein, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.3scaffold34405_10901-16579' '(at4g00210 : 194.0) LOB domain-containing protein 31 (LBD31); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 19 (TAIR:AT2G45410.1); Has 416 Blast hits to 414 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 416; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 161.0) no description available & (reliability: 388.0) & (original description: Putative AS2, Description = LOB domain-containing protein 16, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.3scaffold36982_14190-17372' '(at2g40470 : 209.0) LOB domain-containing protein 15 (LBD15); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 13 (TAIR:AT2G30340.1); Has 1010 Blast hits to 1005 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 1006; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 166.0) no description available & (reliability: 418.0) & (original description: Putative LBD15, Description = LOB domain-containing protein 15, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.3scaffold44975_12095-15027' '(at5g66870 : 223.0) Encodes LOB domain protein whose overexpression results in KNOX gene repression. Overexpression also results in plants with hyponastic leaves, downward pointing flowers and reduced apical dominance. May be involved in the transcriptional regulation of the homeobox gene BP (brevipedicellus) during lateral organ differentiation. Acts together with AS2 in proximal-distal symmetry determination.; ASYMMETRIC LEAVES 2-like 1 (ASL1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Asymmetric leaves, AS2/LOB (InterPro:IPR017414); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 10 (TAIR:AT2G23660.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66843 : 157.0) no description available & (reliability: 446.0) & (original description: Putative BnaC03g38310D, Description = BnaC03g38310D protein, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.3scaffold47340_1-1516' '(at1g31320 : 103.0) LOB domain-containing protein 4 (LBD4); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: ASYMMETRIC LEAVES 2-like 9 (TAIR:AT1G16530.1); Has 1039 Blast hits to 1034 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1039; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 89.5) no description available & (reliability: 206.0) & (original description: Putative ASL4, Description = Lateral organ boundaries domain-containing protein, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.3scaffold58963_5361-8919' '(gnl|cdd|66843 : 126.0) no description available & (at3g47870 : 125.0) Required for normal cell division during pollen development. Mutant has extra cell in pollen of vegetative cell identity. Male gametophytic mutation.; LOB domain-containing protein 27 (LBD27); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen development; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 22 (TAIR:AT3G13850.1); Has 2313 Blast hits to 1889 proteins in 56 species: Archae - 0; Bacteria - 4; Metazoa - 46; Fungi - 29; Plants - 845; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative AS2, Description = LOB domain-containing protein 6, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.3scaffold62961_3685-7275' '(at1g07900 : 207.0) LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 163.0) no description available & (reliability: 414.0) & (original description: Putative LBD24, Description = LOB domain-containing protein 24, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.3scaffold68137_3141-5611' '(at5g63090 : 192.0) Involved in lateral organ development; LATERAL ORGAN BOUNDARIES (LOB); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 25 (TAIR:AT3G27650.1); Has 986 Blast hits to 981 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 986; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 148.0) no description available & (reliability: 384.0) & (original description: Putative AS2, Description = LOB domain-containing protein 6, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.3scaffold81647_3851-6837' '(at5g66870 : 230.0) Encodes LOB domain protein whose overexpression results in KNOX gene repression. Overexpression also results in plants with hyponastic leaves, downward pointing flowers and reduced apical dominance. May be involved in the transcriptional regulation of the homeobox gene BP (brevipedicellus) during lateral organ differentiation. Acts together with AS2 in proximal-distal symmetry determination.; ASYMMETRIC LEAVES 2-like 1 (ASL1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Asymmetric leaves, AS2/LOB (InterPro:IPR017414); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 10 (TAIR:AT2G23660.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66843 : 157.0) no description available & (reliability: 460.0) & (original description: Putative LBD6, Description = LOB domain-containing protein 6, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.5scaffold49_131379-134764' '(at2g40470 : 231.0) LOB domain-containing protein 15 (LBD15); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 13 (TAIR:AT2G30340.1); Has 1010 Blast hits to 1005 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 1006; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 165.0) no description available & (reliability: 462.0) & (original description: Putative LBD15, Description = LOB domain-containing protein 15, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.5scaffold261_214215-218589' '(at2g28500 : 183.0) LOB domain-containing protein 11 (LBD11); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 1 (TAIR:AT1G07900.1); Has 1191 Blast hits to 1170 proteins in 85 species: Archae - 8; Bacteria - 66; Metazoa - 21; Fungi - 2; Plants - 1049; Viruses - 10; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|66843 : 158.0) no description available & (reliability: 366.0) & (original description: Putative AS2, Description = LOB domain-containing protein 1, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.5scaffold467_352977-358729' '(at2g45420 : 223.0) LOB domain-containing protein 18 (LBD18); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Uncharacterised conserved protein UCP038127, LOB (InterPro:IPR017394); BEST Arabidopsis thaliana protein match is: Lateral organ boundaries (LOB) domain family protein (TAIR:AT4G00220.1); Has 12357 Blast hits to 5209 proteins in 472 species: Archae - 12; Bacteria - 2131; Metazoa - 4972; Fungi - 448; Plants - 3332; Viruses - 154; Other Eukaryotes - 1308 (source: NCBI BLink). & (gnl|cdd|66843 : 169.0) no description available & (reliability: 446.0) & (original description: Putative LBD18, Description = LOB domain-containing protein 18, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.5scaffold1312_65339-71594' '(at2g42430 : 196.0) LOB-domain protein gene LBD16. This gene contains one auxin-responsive element (AuxRE).; lateral organ boundaries-domain 16 (LBD16); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: lateral organ boundaries-domain 29 (TAIR:AT3G58190.1); Has 917 Blast hits to 912 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 917; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 157.0) no description available & (reliability: 392.0) & (original description: Putative LBD16, Description = LOB domain-containing protein 16, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.5scaffold1931_219244-222920' '(at2g40470 : 210.0) LOB domain-containing protein 15 (LBD15); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 13 (TAIR:AT2G30340.1); Has 1010 Blast hits to 1005 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 1006; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 156.0) no description available & (reliability: 420.0) & (original description: Putative AS2, Description = LOB domain-containing protein 6, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.5scaffold2542_165575-170543' '(at1g07900 : 197.0) LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 157.0) no description available & (reliability: 394.0) & (original description: Putative AS2, Description = LOB domain-containing protein 1, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.5scaffold2686_273240-277092' '(at1g07900 : 190.0) LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 159.0) no description available & (reliability: 380.0) & (original description: Putative LBD1, Description = LOB domain-containing protein 1, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.5scaffold3129_184427-186918' '(at5g63090 : 203.0) Involved in lateral organ development; LATERAL ORGAN BOUNDARIES (LOB); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 25 (TAIR:AT3G27650.1); Has 986 Blast hits to 981 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 986; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 162.0) no description available & (reliability: 406.0) & (original description: Putative AS2, Description = LOB domain-containing protein 6, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'nbv0.5scaffold4005_31577-34059' '(at3g27650 : 191.0) LOB domain-containing protein 25 (LBD25); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: Lateral organ boundaries (LOB) domain family protein (TAIR:AT5G63090.4); Has 960 Blast hits to 955 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 960; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 161.0) no description available & (reliability: 382.0) & (original description: Putative AS2, Description = LOB domain-containing protein 6, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben044scf00006315ctg020_1-2895' '(at1g65620 : 201.0) Required for formation of a symmetric flat leaf lamina, encodes a member of a family of proteins characterized by cysteine repeats and a leucine zipper; involved in KNOX gene regulation. Acts together with ASL1 in proximal-distal symmetry determination. Forms a complex with AS1 that binds to the BP promoter and leads to silencing of BP.; ASYMMETRIC LEAVES 2 (AS2); FUNCTIONS IN: protein binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleoplasm, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: ASYMMETRIC LEAVES 2-like 1 (TAIR:AT5G66870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66843 : 170.0) no description available & (reliability: 402.0) & (original description: Putative LBD6, Description = LOB domain-containing protein 6, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben044scf00008848ctg001_4849-7400' '(at3g27650 : 203.0) LOB domain-containing protein 25 (LBD25); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: Lateral organ boundaries (LOB) domain family protein (TAIR:AT5G63090.4); Has 960 Blast hits to 955 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 960; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 158.0) no description available & (reliability: 406.0) & (original description: Putative LOB, Description = Protein LATERAL ORGAN BOUNDARIES, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben044scf00009830ctg006_1303-4068' '(at2g30130 : 209.0) Overexpression/activation tagged allele has epinastic leaves, reduced apical dominance and is sterile. Gene is similar to asymmetric leaves (AS)/lateral organ boundary (LOB) genes which repress KNOX gene expression.; ASL5; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1148 Blast hits to 1140 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1024; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|66843 : 161.0) no description available & (reliability: 418.0) & (original description: Putative LBD24, Description = LOB domain-containing protein 24, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben044scf00020283ctg005_435-6234' '(at2g45420 : 202.0) LOB domain-containing protein 18 (LBD18); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Uncharacterised conserved protein UCP038127, LOB (InterPro:IPR017394); BEST Arabidopsis thaliana protein match is: Lateral organ boundaries (LOB) domain family protein (TAIR:AT4G00220.1); Has 12357 Blast hits to 5209 proteins in 472 species: Archae - 12; Bacteria - 2131; Metazoa - 4972; Fungi - 448; Plants - 3332; Viruses - 154; Other Eukaryotes - 1308 (source: NCBI BLink). & (gnl|cdd|66843 : 172.0) no description available & (reliability: 404.0) & (original description: Putative LBD18, Description = LOB domain-containing protein 18, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben044scf00020394ctg019_3282-5800' '(at3g11090 : 164.0) LOB domain-containing protein 21 (LBD21); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 25 (TAIR:AT3G27650.1); Has 1016 Blast hits to 1011 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1016; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 156.0) no description available & (reliability: 328.0) & (original description: Putative AS2, Description = LOB domain-containing protein 6, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben044scf00020909ctg005_1-2484' '(at3g26660 : 140.0) LOB domain-containing protein 24 (LBD24); INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 23 (TAIR:AT3G26620.1); Has 984 Blast hits to 979 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 984; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 129.0) no description available & (reliability: 280.0) & (original description: Putative LBD24, Description = LOB domain-containing protein 24, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben044scf00025097ctg002_1920-4649' '(at3g49940 : 176.0) LOB domain-containing protein 38 (LBD38); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 37 (TAIR:AT5G67420.1); Has 581 Blast hits to 580 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 581; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 100.0) no description available & (reliability: 352.0) & (original description: Putative ASL37, Description = LOB domain-containing protein 39, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben044scf00027031ctg004_2212-5269' '(at5g66870 : 222.0) Encodes LOB domain protein whose overexpression results in KNOX gene repression. Overexpression also results in plants with hyponastic leaves, downward pointing flowers and reduced apical dominance. May be involved in the transcriptional regulation of the homeobox gene BP (brevipedicellus) during lateral organ differentiation. Acts together with AS2 in proximal-distal symmetry determination.; ASYMMETRIC LEAVES 2-like 1 (ASL1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Asymmetric leaves, AS2/LOB (InterPro:IPR017414); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 10 (TAIR:AT2G23660.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66843 : 156.0) no description available & (reliability: 444.0) & (original description: Putative LBD36, Description = LOB domain-containing protein 36, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben044scf00030506ctg006_4451-7155' '(at3g02550 : 221.0) LOB domain-containing protein 41 (LBD41); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Asymmetric leaves, AS2/LOB (InterPro:IPR017414); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 40 (TAIR:AT1G67100.1); Has 601 Blast hits to 600 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 601; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 107.0) no description available & (reliability: 442.0) & (original description: Putative LBD41, Description = LOB domain-containing protein 41, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben044scf00032341ctg011_312-4414' '(at2g28500 : 172.0) LOB domain-containing protein 11 (LBD11); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 1 (TAIR:AT1G07900.1); Has 1191 Blast hits to 1170 proteins in 85 species: Archae - 8; Bacteria - 66; Metazoa - 21; Fungi - 2; Plants - 1049; Viruses - 10; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|66843 : 159.0) no description available & (reliability: 344.0) & (original description: Putative LBD1, Description = LOB domain-containing protein 1, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben044scf00050483ctg000_9729-12786' '(at5g67420 : 241.0) LOB domain-containing protein 37 (LBD37); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 38 (TAIR:AT3G49940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66843 : 103.0) no description available & (reliability: 482.0) & (original description: Putative LBD37, Description = LOB domain-containing protein 37, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben044scf00055652ctg004_114-2437' '(at1g07900 : 120.0) LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 86.1) no description available & (reliability: 240.0) & (original description: Putative ASL5, Description = LOB domain-containing protein 1, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben044scf00061093ctg000_1-2033' '(at1g31320 : 96.7) LOB domain-containing protein 4 (LBD4); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: ASYMMETRIC LEAVES 2-like 9 (TAIR:AT1G16530.1); Has 1039 Blast hits to 1034 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1039; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 86.1) no description available & (reliability: 193.4) & (original description: Putative ASL4, Description = Lateral organ boundaries domain-containing protein, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101ctg14421_1-1905' '(at3g02550 : 227.0) LOB domain-containing protein 41 (LBD41); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Asymmetric leaves, AS2/LOB (InterPro:IPR017414); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 40 (TAIR:AT1G67100.1); Has 601 Blast hits to 600 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 601; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 104.0) no description available & (reliability: 454.0) & (original description: Putative LBD41, Description = LOB domain-containing protein 41, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf00024_362344-368006' '(at3g47870 : 156.0) Required for normal cell division during pollen development. Mutant has extra cell in pollen of vegetative cell identity. Male gametophytic mutation.; LOB domain-containing protein 27 (LBD27); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen development; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 22 (TAIR:AT3G13850.1); Has 2313 Blast hits to 1889 proteins in 56 species: Archae - 0; Bacteria - 4; Metazoa - 46; Fungi - 29; Plants - 845; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (gnl|cdd|66843 : 130.0) no description available & (reliability: 312.0) & (original description: Putative BnaC01g42830D, Description = BnaC01g42830D protein, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf00033_306524-308898' '(gnl|cdd|66843 : 106.0) no description available & (at3g47870 : 99.0) Required for normal cell division during pollen development. Mutant has extra cell in pollen of vegetative cell identity. Male gametophytic mutation.; LOB domain-containing protein 27 (LBD27); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen development; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 22 (TAIR:AT3G13850.1); Has 2313 Blast hits to 1889 proteins in 56 species: Archae - 0; Bacteria - 4; Metazoa - 46; Fungi - 29; Plants - 845; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative PGSC0003DMG400043103, Description = , PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf00128_571001-573594' '(gnl|cdd|66843 : 118.0) no description available & (at3g47870 : 115.0) Required for normal cell division during pollen development. Mutant has extra cell in pollen of vegetative cell identity. Male gametophytic mutation.; LOB domain-containing protein 27 (LBD27); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen development; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 22 (TAIR:AT3G13850.1); Has 2313 Blast hits to 1889 proteins in 56 species: Archae - 0; Bacteria - 4; Metazoa - 46; Fungi - 29; Plants - 845; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative ASL29, Description = LOB domain-containing protein 22, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf00271_388328-395440' '(at1g31320 : 184.0) LOB domain-containing protein 4 (LBD4); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: ASYMMETRIC LEAVES 2-like 9 (TAIR:AT1G16530.1); Has 1039 Blast hits to 1034 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1039; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 171.0) no description available & (reliability: 368.0) & (original description: Putative LBD3, Description = LOB domain-containing protein 3, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf00339_417714-421887' '(at3g47870 : 126.0) Required for normal cell division during pollen development. Mutant has extra cell in pollen of vegetative cell identity. Male gametophytic mutation.; LOB domain-containing protein 27 (LBD27); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen development; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 22 (TAIR:AT3G13850.1); Has 2313 Blast hits to 1889 proteins in 56 species: Archae - 0; Bacteria - 4; Metazoa - 46; Fungi - 29; Plants - 845; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (gnl|cdd|66843 : 125.0) no description available & (reliability: 252.0) & (original description: Putative AS2, Description = LOB domain-containing protein, putative, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf00482_1022220-1026068' '(at1g07900 : 189.0) LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 159.0) no description available & (reliability: 378.0) & (original description: Putative LBD1, Description = LOB domain-containing protein 1, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf00759_10788-14149' '(at1g65620 : 196.0) Required for formation of a symmetric flat leaf lamina, encodes a member of a family of proteins characterized by cysteine repeats and a leucine zipper; involved in KNOX gene regulation. Acts together with ASL1 in proximal-distal symmetry determination. Forms a complex with AS1 that binds to the BP promoter and leads to silencing of BP.; ASYMMETRIC LEAVES 2 (AS2); FUNCTIONS IN: protein binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleoplasm, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: ASYMMETRIC LEAVES 2-like 1 (TAIR:AT5G66870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66843 : 171.0) no description available & (reliability: 392.0) & (original description: Putative LBD6, Description = LOB domain-containing protein 6, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf00773_1474495-1477010' '(at3g11090 : 160.0) LOB domain-containing protein 21 (LBD21); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 25 (TAIR:AT3G27650.1); Has 1016 Blast hits to 1011 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1016; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 157.0) no description available & (reliability: 320.0) & (original description: Putative AS2, Description = LOB domain-containing protein 6, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf00991_1393970-1396742' '(at5g67420 : 248.0) LOB domain-containing protein 37 (LBD37); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 38 (TAIR:AT3G49940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66843 : 106.0) no description available & (reliability: 496.0) & (original description: Putative LBD37, Description = LOB domain-containing protein 37, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf01124_426313-429814' '(at2g40470 : 208.0) LOB domain-containing protein 15 (LBD15); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 13 (TAIR:AT2G30340.1); Has 1010 Blast hits to 1005 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 1006; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 166.0) no description available & (reliability: 416.0) & (original description: Putative PtxtLBD15a, Description = LOB domain-containing protein 15, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf01290_115952-119894' '(at2g40470 : 219.0) LOB domain-containing protein 15 (LBD15); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 13 (TAIR:AT2G30340.1); Has 1010 Blast hits to 1005 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 1006; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 163.0) no description available & (reliability: 438.0) & (original description: Putative PtxtLBD15a, Description = LOB domain-containing protein 15, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf01448_55957-58526' '(at3g27650 : 205.0) LOB domain-containing protein 25 (LBD25); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: Lateral organ boundaries (LOB) domain family protein (TAIR:AT5G63090.4); Has 960 Blast hits to 955 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 960; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 163.0) no description available & (reliability: 410.0) & (original description: Putative BnaC03g38310D, Description = BnaC03g38310D protein, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf01626_213689-217285' '(at3g03760 : 199.0) LOB domain-containing protein 20 (LBD20); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Uncharacterised conserved protein UCP038127, LOB (InterPro:IPR017394); BEST Arabidopsis thaliana protein match is: lateral organ boundaries-domain 16 (TAIR:AT2G42430.1); Has 888 Blast hits to 883 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 0; Plants - 872; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 153.0) no description available & (reliability: 398.0) & (original description: Putative ASL1, Description = LOB domain protein, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf02017_388838-392256' '(at1g65620 : 212.0) Required for formation of a symmetric flat leaf lamina, encodes a member of a family of proteins characterized by cysteine repeats and a leucine zipper; involved in KNOX gene regulation. Acts together with ASL1 in proximal-distal symmetry determination. Forms a complex with AS1 that binds to the BP promoter and leads to silencing of BP.; ASYMMETRIC LEAVES 2 (AS2); FUNCTIONS IN: protein binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleoplasm, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: ASYMMETRIC LEAVES 2-like 1 (TAIR:AT5G66870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66843 : 171.0) no description available & (reliability: 424.0) & (original description: Putative AS2, Description = LOB domain-containing protein 6, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf02045_251958-259042' '(at1g31320 : 217.0) LOB domain-containing protein 4 (LBD4); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: ASYMMETRIC LEAVES 2-like 9 (TAIR:AT1G16530.1); Has 1039 Blast hits to 1034 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1039; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 172.0) no description available & (reliability: 434.0) & (original description: Putative LBD3, Description = LOB domain-containing protein 3, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf02381_260549-263573' '(at3g02550 : 258.0) LOB domain-containing protein 41 (LBD41); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Asymmetric leaves, AS2/LOB (InterPro:IPR017414); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 40 (TAIR:AT1G67100.1); Has 601 Blast hits to 600 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 601; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 113.0) no description available & (reliability: 516.0) & (original description: Putative LBD41, Description = LOB domain-containing protein 41, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf02750_236176-238550' '(gnl|cdd|66843 : 104.0) no description available & (at3g47870 : 90.5) Required for normal cell division during pollen development. Mutant has extra cell in pollen of vegetative cell identity. Male gametophytic mutation.; LOB domain-containing protein 27 (LBD27); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen development; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 22 (TAIR:AT3G13850.1); Has 2313 Blast hits to 1889 proteins in 56 species: Archae - 0; Bacteria - 4; Metazoa - 46; Fungi - 29; Plants - 845; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative PGSC0003DMG400043103, Description = , PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf02849_290737-294242' '(at5g66870 : 227.0) Encodes LOB domain protein whose overexpression results in KNOX gene repression. Overexpression also results in plants with hyponastic leaves, downward pointing flowers and reduced apical dominance. May be involved in the transcriptional regulation of the homeobox gene BP (brevipedicellus) during lateral organ differentiation. Acts together with AS2 in proximal-distal symmetry determination.; ASYMMETRIC LEAVES 2-like 1 (ASL1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Asymmetric leaves, AS2/LOB (InterPro:IPR017414); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 10 (TAIR:AT2G23660.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66843 : 157.0) no description available & (reliability: 454.0) & (original description: Putative LBD6, Description = LOB domain-containing protein 6, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf03156_118216-121556' '(at2g30130 : 211.0) Overexpression/activation tagged allele has epinastic leaves, reduced apical dominance and is sterile. Gene is similar to asymmetric leaves (AS)/lateral organ boundary (LOB) genes which repress KNOX gene expression.; ASL5; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1148 Blast hits to 1140 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1024; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|66843 : 164.0) no description available & (reliability: 422.0) & (original description: Putative AS2, Description = LOB domain-containing protein 1, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf03441_55252-57785' '(at3g11090 : 181.0) LOB domain-containing protein 21 (LBD21); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 25 (TAIR:AT3G27650.1); Has 1016 Blast hits to 1011 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1016; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 157.0) no description available & (reliability: 362.0) & (original description: Putative AS2, Description = LOB domain-containing protein 6, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf03839_1077440-1191035' '(at3g13850 : 134.0) LOB domain-containing protein 22 (LBD22); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 7 (TAIR:AT1G72980.1); Has 841 Blast hits to 836 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 839; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 133.0) no description available & (reliability: 268.0) & (original description: Putative ASL29, Description = LOB domain-containing protein 22, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf03868_104087-107525' '(at3g02550 : 217.0) LOB domain-containing protein 41 (LBD41); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Asymmetric leaves, AS2/LOB (InterPro:IPR017414); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 40 (TAIR:AT1G67100.1); Has 601 Blast hits to 600 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 601; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 107.0) no description available & (reliability: 434.0) & (original description: Putative LBD41, Description = LOB domain-containing protein 41, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf03951_12731-18448' '(at2g45420 : 228.0) LOB domain-containing protein 18 (LBD18); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Uncharacterised conserved protein UCP038127, LOB (InterPro:IPR017394); BEST Arabidopsis thaliana protein match is: Lateral organ boundaries (LOB) domain family protein (TAIR:AT4G00220.1); Has 12357 Blast hits to 5209 proteins in 472 species: Archae - 12; Bacteria - 2131; Metazoa - 4972; Fungi - 448; Plants - 3332; Viruses - 154; Other Eukaryotes - 1308 (source: NCBI BLink). & (gnl|cdd|66843 : 170.0) no description available & (reliability: 456.0) & (original description: Putative LBD18, Description = LOB domain-containing protein 18, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf03951_238102-242421' '(at4g00210 : 144.0) LOB domain-containing protein 31 (LBD31); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 19 (TAIR:AT2G45410.1); Has 416 Blast hits to 414 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 416; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 144.0) no description available & (reliability: 288.0) & (original description: Putative ASL4, Description = LOB domain-containing protein 16, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf04117_18349-21817' '(gnl|cdd|66843 : 152.0) no description available & (at2g42430 : 150.0) LOB-domain protein gene LBD16. This gene contains one auxin-responsive element (AuxRE).; lateral organ boundaries-domain 16 (LBD16); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: lateral organ boundaries-domain 29 (TAIR:AT3G58190.1); Has 917 Blast hits to 912 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 917; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative AS2, Description = LOB domain protein, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf04117_18364-21835' '(at2g42430 : 155.0) LOB-domain protein gene LBD16. This gene contains one auxin-responsive element (AuxRE).; lateral organ boundaries-domain 16 (LBD16); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: lateral organ boundaries-domain 29 (TAIR:AT3G58190.1); Has 917 Blast hits to 912 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 917; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 153.0) no description available & (reliability: 310.0) & (original description: Putative AS2, Description = LOB domain protein, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf04182_61640-64332' '(at5g06080 : 162.0) LOB domain-containing protein 33 (LBD33); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: lateral organ boundaries-domain 29 (TAIR:AT3G58190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66843 : 145.0) no description available & (reliability: 324.0) & (original description: Putative ASL1, Description = LOB domain protein, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf05272_410508-413954' '(at3g13850 : 146.0) LOB domain-containing protein 22 (LBD22); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 7 (TAIR:AT1G72980.1); Has 841 Blast hits to 836 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 839; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 131.0) no description available & (reliability: 292.0) & (original description: Putative ASL29, Description = LOB domain-containing protein 22, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf05749_73658-76460' '(at5g67420 : 215.0) LOB domain-containing protein 37 (LBD37); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 38 (TAIR:AT3G49940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66843 : 103.0) no description available & (reliability: 430.0) & (original description: Putative LBD37, Description = LOB domain-containing protein 37, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf05917_155543-159628' '(at2g45410 : 176.0) LOB domain-containing protein 19 (LBD19); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 31 (TAIR:AT4G00210.1); Has 977 Blast hits to 972 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 977; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 148.0) no description available & (reliability: 352.0) & (original description: Putative ASL1, Description = LOB domain-containing protein 16, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf06149_67380-74051' '(at2g42430 : 204.0) LOB-domain protein gene LBD16. This gene contains one auxin-responsive element (AuxRE).; lateral organ boundaries-domain 16 (LBD16); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: lateral organ boundaries-domain 29 (TAIR:AT3G58190.1); Has 917 Blast hits to 912 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 917; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 158.0) no description available & (reliability: 408.0) & (original description: Putative LBD16, Description = LOB domain-containing protein 16, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf06155_97080-100970' '(at1g07900 : 206.0) LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 164.0) no description available & (reliability: 412.0) & (original description: Putative LBD1, Description = LOB domain-containing protein 1, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf06343_40085-42870' '(gnl|cdd|66843 : 162.0) no description available & (at3g58190 : 159.0) This gene contains two auxin-responsive element (AuxRE).; lateral organ boundaries-domain 29 (LBD29); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: Lateral organ boundaries (LOB) domain family protein (TAIR:AT2G42440.1); Has 858 Blast hits to 853 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 858; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative LBD29, Description = LOB domain-containing protein 29, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf06435_224578-227388' '(at3g26620 : 136.0) LOB domain-containing protein 23 (LBD23); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 24 (TAIR:AT3G26660.1); Has 984 Blast hits to 979 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 984; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 121.0) no description available & (reliability: 272.0) & (original description: Putative AS2, Description = Lateral organ boundaries (LOB) domain protein, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf06867_363675-366607' '(at5g66870 : 222.0) Encodes LOB domain protein whose overexpression results in KNOX gene repression. Overexpression also results in plants with hyponastic leaves, downward pointing flowers and reduced apical dominance. May be involved in the transcriptional regulation of the homeobox gene BP (brevipedicellus) during lateral organ differentiation. Acts together with AS2 in proximal-distal symmetry determination.; ASYMMETRIC LEAVES 2-like 1 (ASL1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Asymmetric leaves, AS2/LOB (InterPro:IPR017414); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 10 (TAIR:AT2G23660.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66843 : 157.0) no description available & (reliability: 444.0) & (original description: Putative AS2, Description = LOB domain-containing protein 6, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf06942_173569-176362' '(at2g30130 : 212.0) Overexpression/activation tagged allele has epinastic leaves, reduced apical dominance and is sterile. Gene is similar to asymmetric leaves (AS)/lateral organ boundary (LOB) genes which repress KNOX gene expression.; ASL5; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1148 Blast hits to 1140 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1024; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|66843 : 168.0) no description available & (reliability: 424.0) & (original description: Putative LBD12, Description = LOB domain-containing protein 12, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf06986_365097-367039' '(at3g27650 : 197.0) LOB domain-containing protein 25 (LBD25); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: Lateral organ boundaries (LOB) domain family protein (TAIR:AT5G63090.4); Has 960 Blast hits to 955 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 960; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 163.0) no description available & (reliability: 394.0) & (original description: Putative AS2, Description = LOB domain-containing protein 6, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf07793_319940-322488' '(at5g63090 : 199.0) Involved in lateral organ development; LATERAL ORGAN BOUNDARIES (LOB); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 25 (TAIR:AT3G27650.1); Has 986 Blast hits to 981 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 986; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 165.0) no description available & (reliability: 398.0) & (original description: Putative AS2, Description = LOB domain-containing protein 6, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf08508_86714-102532' '(at2g45410 : 183.0) LOB domain-containing protein 19 (LBD19); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 31 (TAIR:AT4G00210.1); Has 977 Blast hits to 972 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 977; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 159.0) no description available & (reliability: 366.0) & (original description: Putative AS2, Description = LOB domain-containing protein 16, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf08618_295157-299511' '(at1g07900 : 200.0) LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 161.0) no description available & (reliability: 400.0) & (original description: Putative LBD1, Description = LOB domain-containing protein 1, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf09191_216447-219594' '(at1g06280 : 134.0) LOB domain-containing protein 2 (LBD2); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: Lateral organ boundaries (LOB) domain family protein (TAIR:AT1G65620.4); Has 899 Blast hits to 894 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 888; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66843 : 109.0) no description available & (reliability: 268.0) & (original description: Putative , Description = , PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf09365_145733-148826' '(at3g47870 : 161.0) Required for normal cell division during pollen development. Mutant has extra cell in pollen of vegetative cell identity. Male gametophytic mutation.; LOB domain-containing protein 27 (LBD27); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen development; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 22 (TAIR:AT3G13850.1); Has 2313 Blast hits to 1889 proteins in 56 species: Archae - 0; Bacteria - 4; Metazoa - 46; Fungi - 29; Plants - 845; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (gnl|cdd|66843 : 130.0) no description available & (reliability: 322.0) & (original description: Putative BnaC01g42830D, Description = BnaC01g42830D protein, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf10262_128488-131281' '(at3g49940 : 225.0) LOB domain-containing protein 38 (LBD38); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 37 (TAIR:AT5G67420.1); Has 581 Blast hits to 580 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 581; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 104.0) no description available & (reliability: 450.0) & (original description: Putative ASL37, Description = LOB domain-containing protein 39, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf11836_122796-125744' '(at3g49940 : 228.0) LOB domain-containing protein 38 (LBD38); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 37 (TAIR:AT5G67420.1); Has 581 Blast hits to 580 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 581; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 107.0) no description available & (reliability: 456.0) & (original description: Putative LBD37, Description = LOB domain-containing protein 37, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf11999_87033-89762' '(at3g49940 : 119.0) LOB domain-containing protein 38 (LBD38); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 37 (TAIR:AT5G67420.1); Has 581 Blast hits to 580 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 581; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative ASL39, Description = LOB domain-containing protein 39, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf14206_75990-79314' '(at1g07900 : 196.0) LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66843 : 155.0) no description available & (reliability: 392.0) & (original description: Putative LBD1, Description = LOB domain-containing protein 1, PFAM = PF03195)' T '27.3.37' 'RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family' 'niben101scf15543_252819-255590' '(at5g67420 : 237.0) LOB domain-containing protein 37 (LBD37); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 38 (TAIR:AT3G49940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66843 : 103.0) no description available & (reliability: 474.0) & (original description: Putative LBD37, Description = LOB domain-containing protein 37, PFAM = PF03195)' T '27.3.38' 'RNA.regulation of transcription.AT-rich interaction domain containing transcription factor family' 'nbv0.3scaffold12636_13375-31724' '(at1g76510 : 377.0) ARID/BRIGHT DNA-binding domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain-containing protein (TAIR:AT1G20910.1). & (gnl|cdd|37955 : 142.0) no description available & (gnl|cdd|47805 : 99.2) no description available & (reliability: 754.0) & (original description: Putative ARID5, Description = AT-rich interactive domain-containing protein 5, PFAM = PF00011;PF01388)' T '27.3.38' 'RNA.regulation of transcription.AT-rich interaction domain containing transcription factor family' 'nbv0.5scaffold521_676376-697516' '(at2g17410 : 276.0) ARID/BRIGHT DNA-binding domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain-containing protein (TAIR:AT1G76510.2). & (gnl|cdd|37955 : 92.1) no description available & (gnl|cdd|47805 : 84.1) no description available & (reliability: 552.0) & (original description: Putative BnaA09g52810D, Description = BnaA09g52810D protein, PFAM = PF01388)' T '27.3.38' 'RNA.regulation of transcription.AT-rich interaction domain containing transcription factor family' 'nbv0.5scaffold4360_3681-7319' '(at2g17410 : 176.0) ARID/BRIGHT DNA-binding domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain-containing protein (TAIR:AT1G76510.2). & (reliability: 352.0) & (original description: Putative SIP1, Description = ARID/BRIGHT DNA-binding domain-containing protein, PFAM = )' T '27.3.38' 'RNA.regulation of transcription.AT-rich interaction domain containing transcription factor family' 'niben044scf00016714ctg003_1-3618' '(at2g17410 : 169.0) ARID/BRIGHT DNA-binding domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain-containing protein (TAIR:AT1G76510.2). & (reliability: 338.0) & (original description: Putative SIP1, Description = ARID/BRIGHT DNA-binding domain-containing protein, PFAM = )' T '27.3.38' 'RNA.regulation of transcription.AT-rich interaction domain containing transcription factor family' 'niben044scf00049484ctg002_9042-15971' '(at1g04880 : 341.0) HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain (TAIR:AT1G76110.1); Has 3445 Blast hits to 3110 proteins in 301 species: Archae - 0; Bacteria - 5; Metazoa - 2269; Fungi - 308; Plants - 431; Viruses - 3; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|37955 : 128.0) no description available & (gnl|cdd|47805 : 93.4) no description available & (reliability: 682.0) & (original description: Putative HMGB9, Description = High mobility group B protein 9, PFAM = PF00505;PF01388)' T '27.3.38' 'RNA.regulation of transcription.AT-rich interaction domain containing transcription factor family' 'niben101scf01177_172278-179644' '(at1g04880 : 341.0) HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain (TAIR:AT1G76110.1); Has 3445 Blast hits to 3110 proteins in 301 species: Archae - 0; Bacteria - 5; Metazoa - 2269; Fungi - 308; Plants - 431; Viruses - 3; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|37955 : 128.0) no description available & (gnl|cdd|47805 : 92.6) no description available & (reliability: 682.0) & (original description: Putative HMGB9, Description = High mobility group B protein 9, PFAM = PF01388;PF00505)' T '27.3.38' 'RNA.regulation of transcription.AT-rich interaction domain containing transcription factor family' 'niben101scf03004_138955-169102' '(at2g17410 : 372.0) ARID/BRIGHT DNA-binding domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain-containing protein (TAIR:AT1G76510.2). & (gnl|cdd|37955 : 151.0) no description available & (gnl|cdd|47805 : 96.1) no description available & (reliability: 744.0) & (original description: Putative ARID1503, Description = ARID/BRIGHT DNA-binding domain-containing protein, PFAM = PF00011;PF01388)' T '27.3.38' 'RNA.regulation of transcription.AT-rich interaction domain containing transcription factor family' 'niben101scf04235_26844-50532' '(at2g17410 : 302.0) ARID/BRIGHT DNA-binding domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain-containing protein (TAIR:AT1G76510.2). & (gnl|cdd|37955 : 111.0) no description available & (gnl|cdd|47805 : 94.2) no description available & (reliability: 604.0) & (original description: Putative ARID1503, Description = ARID/BRIGHT DNA-binding domain-containing protein, PFAM = PF01388)' T '27.3.38' 'RNA.regulation of transcription.AT-rich interaction domain containing transcription factor family' 'niben101scf08065_109506-125192' '(at1g76510 : 356.0) ARID/BRIGHT DNA-binding domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain-containing protein (TAIR:AT1G20910.1). & (gnl|cdd|37955 : 142.0) no description available & (gnl|cdd|47805 : 98.8) no description available & (reliability: 712.0) & (original description: Putative BnaC08g19590D, Description = BnaC08g19590D protein, PFAM = PF01388;PF00011)' T '27.3.38' 'RNA.regulation of transcription.AT-rich interaction domain containing transcription factor family' 'niben101scf09459_306905-313544' '(at1g04880 : 332.0) HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain (TAIR:AT1G76110.1); Has 3445 Blast hits to 3110 proteins in 301 species: Archae - 0; Bacteria - 5; Metazoa - 2269; Fungi - 308; Plants - 431; Viruses - 3; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|37955 : 124.0) no description available & (gnl|cdd|47805 : 91.8) no description available & (reliability: 664.0) & (original description: Putative HMGB10, Description = High mobility group B protein 10, PFAM = PF01388;PF00505)' T '27.3.39' 'RNA.regulation of transcription.AtSR Transcription Factor family' 'nbv0.3scaffold27405_13360-21081' '(at4g35450 : 370.0) Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.; ankyrin repeat-containing protein 2 (AKR2); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1). & (gnl|cdd|29261 : 120.0) no description available & (gnl|cdd|39379 : 85.8) no description available & (reliability: 728.0) & (original description: Putative AKR2B, Description = Ankyrin repeat domain-containing protein 2B, PFAM = PF12796)' T '27.3.39' 'RNA.regulation of transcription.AtSR Transcription Factor family' 'nbv0.5scaffold277_100982-122311' '(at2g22300 : 627.0) Encodes a putative CAM binding transcription factor. Loss of function mutations show enhanced resistance to fungal and bacterial pathogens suggesting that CAMTA functions to suppress defense responses.; signal responsive 1 (SR1); FUNCTIONS IN: calmodulin binding, transcription regulator activity; INVOLVED IN: response to biotic stimulus; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Ankyrin repeat-containing domain (InterPro:IPR020683), CG-1 (InterPro:IPR005559), Ankyrin repeat (InterPro:IPR002110), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains (TAIR:AT5G64220.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35740 : 592.0) no description available & (gnl|cdd|67472 : 208.0) no description available & (reliability: 1254.0) & (original description: Putative Sb01g044480, Description = Putative uncharacterized protein Sb01g044480, PFAM = PF12796;PF03859;PF00612;PF00612;PF01833)' T '27.3.39' 'RNA.regulation of transcription.AtSR Transcription Factor family' 'nbv0.5scaffold1525_226838-241257' '(at2g22300 : 815.0) Encodes a putative CAM binding transcription factor. Loss of function mutations show enhanced resistance to fungal and bacterial pathogens suggesting that CAMTA functions to suppress defense responses.; signal responsive 1 (SR1); FUNCTIONS IN: calmodulin binding, transcription regulator activity; INVOLVED IN: response to biotic stimulus; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Ankyrin repeat-containing domain (InterPro:IPR020683), CG-1 (InterPro:IPR005559), Ankyrin repeat (InterPro:IPR002110), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains (TAIR:AT5G64220.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35740 : 475.0) no description available & (gnl|cdd|67472 : 208.0) no description available & (reliability: 1630.0) & (original description: Putative CMTA3, Description = Calmodulin-binding transcription activator 3, PFAM = PF01833;PF00612;PF00612;PF12796;PF03859)' T '27.3.39' 'RNA.regulation of transcription.AtSR Transcription Factor family' 'nbv0.5scaffold4331_908-11188' '(at4g35450 : 380.0) Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.; ankyrin repeat-containing protein 2 (AKR2); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1). & (gnl|cdd|29261 : 117.0) no description available & (gnl|cdd|39379 : 90.8) no description available & (reliability: 748.0) & (original description: Putative TIP3, Description = TGB12K interacting protein 3, PFAM = PF12796)' T '27.3.39' 'RNA.regulation of transcription.AtSR Transcription Factor family' 'niben044scf00002812ctg013_20242-25759' '(at4g35450 : 380.0) Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.; ankyrin repeat-containing protein 2 (AKR2); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1). & (gnl|cdd|29261 : 117.0) no description available & (gnl|cdd|39379 : 90.8) no description available & (reliability: 746.0) & (original description: Putative AKR2B, Description = Ankyrin repeat domain-containing protein 2B, PFAM = PF12796)' T '27.3.39' 'RNA.regulation of transcription.AtSR Transcription Factor family' 'niben044scf00009193ctg020_4024-11326' '(at3g16940 : 258.0) calmodulin binding;transcription regulators; FUNCTIONS IN: calmodulin binding, transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), CG-1 (InterPro:IPR005559), Cell surface receptor IPT/TIG (InterPro:IPR002909), IQ calmodulin-binding region (InterPro:IPR000048), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: calmodulin binding;transcription regulators (TAIR:AT4G16150.1); Has 5766 Blast hits to 3807 proteins in 309 species: Archae - 13; Bacteria - 199; Metazoa - 3382; Fungi - 247; Plants - 659; Viruses - 23; Other Eukaryotes - 1243 (source: NCBI BLink). & (gnl|cdd|35740 : 225.0) no description available & (gnl|cdd|67472 : 149.0) no description available & (reliability: 516.0) & (original description: Putative SR1, Description = Calmodulin-binding transcription activator 2, PFAM = PF03859)' T '27.3.39' 'RNA.regulation of transcription.AtSR Transcription Factor family' 'niben101scf02016_21901-28906' '(at4g35450 : 370.0) Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.; ankyrin repeat-containing protein 2 (AKR2); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1). & (gnl|cdd|29261 : 120.0) no description available & (gnl|cdd|39379 : 85.8) no description available & (reliability: 726.0) & (original description: Putative AKR2B, Description = Ankyrin repeat domain-containing protein 2B, PFAM = PF12796)' T '27.3.39' 'RNA.regulation of transcription.AtSR Transcription Factor family' 'niben101scf02268_534813-550607' '(at2g22300 : 875.0) Encodes a putative CAM binding transcription factor. Loss of function mutations show enhanced resistance to fungal and bacterial pathogens suggesting that CAMTA functions to suppress defense responses.; signal responsive 1 (SR1); FUNCTIONS IN: calmodulin binding, transcription regulator activity; INVOLVED IN: response to biotic stimulus; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Ankyrin repeat-containing domain (InterPro:IPR020683), CG-1 (InterPro:IPR005559), Ankyrin repeat (InterPro:IPR002110), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains (TAIR:AT5G64220.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35740 : 506.0) no description available & (gnl|cdd|67472 : 208.0) no description available & (reliability: 1750.0) & (original description: Putative CMTA3, Description = Calmodulin-binding transcription activator 3, PFAM = PF12796;PF01833;PF03859;PF00612;PF00612)' T '27.3.39' 'RNA.regulation of transcription.AtSR Transcription Factor family' 'niben101scf03082_157868-165765' '(at4g35450 : 370.0) Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.; ankyrin repeat-containing protein 2 (AKR2); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1). & (gnl|cdd|29261 : 120.0) no description available & (gnl|cdd|39379 : 85.4) no description available & (reliability: 726.0) & (original description: Putative AKR2B, Description = Ankyrin repeat domain-containing protein 2B, PFAM = PF12796)' T '27.3.39' 'RNA.regulation of transcription.AtSR Transcription Factor family' 'niben101scf07773_43899-61221' '(at5g64220 : 882.0) Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains; FUNCTIONS IN: calmodulin binding, transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), CG-1 (InterPro:IPR005559), Ankyrin repeat (InterPro:IPR002110), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: ethylene induced calmodulin binding protein (TAIR:AT5G09410.2); Has 14537 Blast hits to 9093 proteins in 523 species: Archae - 46; Bacteria - 905; Metazoa - 8300; Fungi - 946; Plants - 937; Viruses - 67; Other Eukaryotes - 3336 (source: NCBI BLink). & (gnl|cdd|35740 : 683.0) no description available & (gnl|cdd|67472 : 210.0) no description available & (reliability: 1764.0) & (original description: Putative CMTA2, Description = Calmodulin-binding transcription activator 2, PFAM = PF03859;PF12796;PF00612;PF00612;PF01833)' T '27.3.39' 'RNA.regulation of transcription.AtSR Transcription Factor family' 'niben101scf09203_104785-122389' '(at4g16150 : 900.0) calmodulin binding;transcription regulators; FUNCTIONS IN: calmodulin binding, transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), CG-1 (InterPro:IPR005559), Ankyrin repeat (InterPro:IPR002110), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin binding;transcription regulators (TAIR:AT3G16940.1); Has 3526 Blast hits to 2387 proteins in 249 species: Archae - 2; Bacteria - 65; Metazoa - 2447; Fungi - 177; Plants - 543; Viruses - 8; Other Eukaryotes - 284 (source: NCBI BLink). & (gnl|cdd|35740 : 711.0) no description available & (gnl|cdd|67472 : 160.0) no description available & (reliability: 1800.0) & (original description: Putative CMTA5, Description = Calmodulin-binding transcription activator 5, PFAM = PF00612;PF00612;PF03859;PF12796)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'nbv0.3scaffold22189_25801-31111' '(at4g29080 : 236.0) phytochrome-associated protein 2 (PAP2); phytochrome-associated protein 2 (PAP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of translation; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 8 (TAIR:AT2G22670.4); Has 2237 Blast hits to 2234 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 2235; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66035 : 215.0) no description available & (q6at33|iaa19_orysa : 181.0) Auxin-responsive protein IAA19 (Indoleacetic acid-induced protein 19) - Oryza sativa (Rice) & (reliability: 462.0) & (original description: Putative IAA27, Description = Auxin-responsive protein IAA27, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'nbv0.3scaffold26253_23495-27877' '(at2g33310 : 175.0) Auxin induced gene, IAA13 (IAA13).; auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 162.0) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (gnl|cdd|66035 : 140.0) no description available & (reliability: 350.0) & (original description: Putative IAA11, Description = Auxin-responsive protein, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'nbv0.5scaffold848_187282-193003' '(at2g33310 : 139.0) Auxin induced gene, IAA13 (IAA13).; auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 123.0) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (gnl|cdd|66035 : 102.0) no description available & (reliability: 278.0) & (original description: Putative IAA10, Description = Auxin-responsive protein, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'nbv0.5scaffold2154_38883-44134' '(at4g29080 : 213.0) phytochrome-associated protein 2 (PAP2); phytochrome-associated protein 2 (PAP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of translation; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 8 (TAIR:AT2G22670.4); Has 2237 Blast hits to 2234 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 2235; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66035 : 177.0) no description available & (q6at33|iaa19_orysa : 167.0) Auxin-responsive protein IAA19 (Indoleacetic acid-induced protein 19) - Oryza sativa (Rice) & (reliability: 424.0) & (original description: Putative AUX6, Description = Auxin-responsive protein, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'nbv0.5scaffold4059_197814-202934' '(at2g33310 : 222.0) Auxin induced gene, IAA13 (IAA13).; auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 166.0) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (gnl|cdd|66035 : 142.0) no description available & (reliability: 444.0) & (original description: Putative IAA13, Description = Auxin-responsive protein IAA13, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'nbv0.5scaffold5230_33307-37907' '(at4g14550 : 262.0) IAA14 is a member of the Aux/IAA protein family. Involved in lateral root development. Gain of function mutation decreases auxin-inducible gene expression. Protein is localized to the nucleus. Expressed in stele and root tip epidermis. Functions as a negative regulator of ARF7/19.; indole-3-acetic acid inducible 14 (IAA14); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid 7 (TAIR:AT3G23050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p13089|aux28_soybn : 229.0) Auxin-induced protein AUX28 - Glycine max (Soybean) & (gnl|cdd|66035 : 195.0) no description available & (reliability: 524.0) & (original description: Putative IAA7, Description = Auxin-responsive protein IAA7, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben044scf00012460ctg032_17974-22823' '(at2g33310 : 174.0) Auxin induced gene, IAA13 (IAA13).; auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 158.0) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (gnl|cdd|66035 : 135.0) no description available & (reliability: 348.0) & (original description: Putative IAA13, Description = Auxin-responsive protein IAA13, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben044scf00017553ctg024_2198-5934' '(at4g32280 : 109.0) Auxin inducible protein.; indole-3-acetic acid inducible 29 (IAA29); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone, response to red light, response to far red light; LOCATED IN: nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 10 (TAIR:AT1G04100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66035 : 98.2) no description available & (q5vrr0|iaa20_orysa : 86.3) Auxin-responsive protein IAA20 (Indoleacetic acid-induced protein 20) - Oryza sativa (Rice) & (reliability: 218.0) & (original description: Putative PGSC0003DMG400030896, Description = Auxin-responsive protein, PFAM = PF02309;PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben044scf00043162ctg001_51-6459' '(at2g01200 : 129.0) Belongs to auxin inducible gene family.; indole-3-acetic acid inducible 32 (IAA32); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, embryo development ending in seed dormancy, pollen development; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 34 (TAIR:AT1G15050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 90.9) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (reliability: 258.0) & (original description: Putative IAA32, Description = Auxin-responsive protein, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf00104_270504-273580' '(gnl|cdd|66035 : 237.0) no description available & (o24542|ax22d_phaau : 207.0) Auxin-induced protein 22D (Indole-3-acetic acid-induced protein ARG13) - Phaseolus aureus (Mung bean) (Vigna radiata) & (at5g43700 : 206.0) Auxin inducible protein similar to transcription factors.; AUXIN INDUCIBLE 2-11 (ATAUX2-11); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative AUX22E, Description = Auxin-induced protein 22E, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf00286_160957-163484' '(at5g43700 : 224.0) Auxin inducible protein similar to transcription factors.; AUXIN INDUCIBLE 2-11 (ATAUX2-11); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66035 : 223.0) no description available & (p32294|ax22b_phaau : 217.0) Auxin-induced protein 22B (Indole-3-acetic acid-induced protein ARG4) - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 448.0) & (original description: Putative IAA4, Description = Auxin-responsive protein IAA4, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf00286_349641-354056' '(at4g14550 : 299.0) IAA14 is a member of the Aux/IAA protein family. Involved in lateral root development. Gain of function mutation decreases auxin-inducible gene expression. Protein is localized to the nucleus. Expressed in stele and root tip epidermis. Functions as a negative regulator of ARF7/19.; indole-3-acetic acid inducible 14 (IAA14); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid 7 (TAIR:AT3G23050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p13089|aux28_soybn : 256.0) Auxin-induced protein AUX28 - Glycine max (Soybean) & (gnl|cdd|66035 : 232.0) no description available & (reliability: 598.0) & (original description: Putative IAA14, Description = Auxin-responsive protein IAA14, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf01218_2275-7012' '(gnl|cdd|66035 : 102.0) no description available & (at4g32280 : 101.0) Auxin inducible protein.; indole-3-acetic acid inducible 29 (IAA29); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone, response to red light, response to far red light; LOCATED IN: nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 10 (TAIR:AT1G04100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5w670|iaa18_orysa : 88.2) Auxin-responsive protein IAA18 (Indoleacetic acid-induced protein 18) - Oryza sativa (Rice) & (reliability: 202.0) & (original description: Putative IAA9, Description = Auxin-responsive protein, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf01438_889824-892973' '(at5g57420 : 138.0) Belongs to auxin inducible gene family.; indole-3-acetic acid inducible 33 (IAA33); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 1006 Blast hits to 1006 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1006; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative IAA33, Description = Auxin-responsive protein, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf01696_444781-449839' '(at3g04730 : 289.0) early auxin-induced (IAA16); indoleacetic acid-induced protein 16 (IAA16); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid 7 (TAIR:AT3G23050.1); Has 1752 Blast hits to 1751 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1751; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p13089|aux28_soybn : 260.0) Auxin-induced protein AUX28 - Glycine max (Soybean) & (gnl|cdd|66035 : 236.0) no description available & (reliability: 578.0) & (original description: Putative IAA16, Description = Auxin-responsive protein IAA16, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf02572_401379-404897' '(gnl|cdd|66035 : 207.0) no description available & (at1g04250 : 203.0) Transcription regulator acting as repressor of auxin-inducible gene expression. Auxin-inducible AUX/IAA gene. Short-lived nuclear protein with four conserved domains. Domain III has homology to beta alpha alpha dimerization and DNA binding domains. Involved in auxin signaling. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components.; AUXIN RESISTANT 3 (AXR3); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 14 (TAIR:AT4G14550.1); Has 1763 Blast hits to 1762 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1762; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (q5vrd1|iaa1_orysa : 178.0) Auxin-responsive protein IAA1 (Indoleacetic acid-induced protein 1) - Oryza sativa (Rice) & (reliability: 406.0) & (original description: Putative IAA1, Description = Auxin-responsive protein IAA1, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf02572_446399-449645' '(p13088|aux22_soybn : 206.0) Auxin-induced protein AUX22 - Glycine max (Soybean) & (gnl|cdd|66035 : 204.0) no description available & (at3g15540 : 174.0) Primary auxin-responsive gene. Involved in the regulation stamen filaments development.; indole-3-acetic acid inducible 19 (IAA19); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: phototropism, gravitropism, response to auxin stimulus, response to brassinosteroid stimulus, stamen filament development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid 6 (TAIR:AT1G52830.1); Has 1781 Blast hits to 1780 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1780; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative AUX22, Description = Auxin-induced protein AUX22, PFAM = PF02309;PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf02635_43871-49100' '(at4g14550 : 300.0) IAA14 is a member of the Aux/IAA protein family. Involved in lateral root development. Gain of function mutation decreases auxin-inducible gene expression. Protein is localized to the nucleus. Expressed in stele and root tip epidermis. Functions as a negative regulator of ARF7/19.; indole-3-acetic acid inducible 14 (IAA14); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid 7 (TAIR:AT3G23050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p13089|aux28_soybn : 265.0) Auxin-induced protein AUX28 - Glycine max (Soybean) & (gnl|cdd|66035 : 227.0) no description available & (reliability: 600.0) & (original description: Putative IAA7, Description = Auxin-responsive protein IAA7, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf02635_254271-257631' '(gnl|cdd|66035 : 251.0) no description available & (at5g43700 : 243.0) Auxin inducible protein similar to transcription factors.; AUXIN INDUCIBLE 2-11 (ATAUX2-11); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p32294|ax22b_phaau : 238.0) Auxin-induced protein 22B (Indole-3-acetic acid-induced protein ARG4) - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 486.0) & (original description: Putative IAA4, Description = Auxin-responsive protein IAA4, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf02805_661739-671236' '(at2g01200 : 147.0) Belongs to auxin inducible gene family.; indole-3-acetic acid inducible 32 (IAA32); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, embryo development ending in seed dormancy, pollen development; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 34 (TAIR:AT1G15050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 91.7) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (reliability: 294.0) & (original description: Putative IAA32, Description = Auxin-responsive protein IAA32, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf02805_663170-668147' '(at2g01200 : 141.0) Belongs to auxin inducible gene family.; indole-3-acetic acid inducible 32 (IAA32); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, embryo development ending in seed dormancy, pollen development; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 34 (TAIR:AT1G15050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 89.0) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (reliability: 282.0) & (original description: Putative IAA32, Description = Auxin-responsive protein, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf03068_333865-340531' '(at2g22670 : 325.0) IAA8 (IAA8) gene is auxin inducible.; indoleacetic acid-induced protein 8 (IAA8); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 9 (TAIR:AT5G65670.2). & (gnl|cdd|66035 : 239.0) no description available & (p0c132|iaa30_orysa : 211.0) Auxin-responsive protein IAA30 (Indoleacetic acid-induced protein 30) - Oryza sativa (Rice) & (reliability: 650.0) & (original description: Putative iaa9, Description = Auxin-responsive protein, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf03701_171819-177101' '(at4g29080 : 255.0) phytochrome-associated protein 2 (PAP2); phytochrome-associated protein 2 (PAP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of translation; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 8 (TAIR:AT2G22670.4); Has 2237 Blast hits to 2234 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 2235; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66035 : 219.0) no description available & (p0c132|iaa30_orysa : 203.0) Auxin-responsive protein IAA30 (Indoleacetic acid-induced protein 30) - Oryza sativa (Rice) & (reliability: 492.0) & (original description: Putative IAA4, Description = Auxin-responsive protein, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf04252_205173-207983' '(gnl|cdd|66035 : 253.0) no description available & (o24542|ax22d_phaau : 243.0) Auxin-induced protein 22D (Indole-3-acetic acid-induced protein ARG13) - Phaseolus aureus (Mung bean) (Vigna radiata) & (at5g43700 : 223.0) Auxin inducible protein similar to transcription factors.; AUXIN INDUCIBLE 2-11 (ATAUX2-11); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative AUX22D, Description = Auxin-induced protein 22D, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf05232_219572-224035' '(gnl|cdd|66035 : 188.0) no description available & (at1g04250 : 176.0) Transcription regulator acting as repressor of auxin-inducible gene expression. Auxin-inducible AUX/IAA gene. Short-lived nuclear protein with four conserved domains. Domain III has homology to beta alpha alpha dimerization and DNA binding domains. Involved in auxin signaling. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components.; AUXIN RESISTANT 3 (AXR3); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 14 (TAIR:AT4G14550.1); Has 1763 Blast hits to 1762 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1762; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (q5vrd1|iaa1_orysa : 167.0) Auxin-responsive protein IAA1 (Indoleacetic acid-induced protein 1) - Oryza sativa (Rice) & (reliability: 352.0) & (original description: Putative IAA17, Description = Auxin-responsive protein IAA17, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf05232_317478-325438' '(gnl|cdd|66035 : 191.0) no description available & (p32293|ax22a_phaau : 177.0) Auxin-induced protein 22A (Indole-3-acetic acid-induced protein ARG3) - Phaseolus aureus (Mung bean) (Vigna radiata) & (at1g52830 : 152.0) An extragenic dominant suppressor of the hy2 mutant phenotype. Also exhibits aspects of constitutive photomorphogenetic phenotype in the absence of hy2. Mutants have dominant leaf curling phenotype shortened hypocotyls and reduced apical hook. Induced by indole-3-acetic acid.; indole-3-acetic acid 6 (IAA6); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 19 (TAIR:AT3G15540.1); Has 1737 Blast hits to 1736 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1736; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative AUX22C, Description = Auxin-induced protein 22C, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf05627_48647-64992' '(at2g01200 : 147.0) Belongs to auxin inducible gene family.; indole-3-acetic acid inducible 32 (IAA32); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, embryo development ending in seed dormancy, pollen development; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 34 (TAIR:AT1G15050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 85.9) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (reliability: 294.0) & (original description: Putative IAA34, Description = Auxin-responsive protein IAA34, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf05720_187657-190996' '(at4g32280 : 100.0) Auxin inducible protein.; indole-3-acetic acid inducible 29 (IAA29); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone, response to red light, response to far red light; LOCATED IN: nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 10 (TAIR:AT1G04100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66035 : 96.2) no description available & (q59aa1|iaa10_orysa : 89.4) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (reliability: 200.0) & (original description: Putative IAA9, Description = Auxin-responsive protein, PFAM = PF02309;PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf05929_382475-391160' '(at2g33310 : 213.0) Auxin induced gene, IAA13 (IAA13).; auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 167.0) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (gnl|cdd|66035 : 137.0) no description available & (reliability: 426.0) & (original description: Putative IAA13, Description = Auxin-responsive protein IAA13, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf07230_80661-85912' '(at4g29080 : 244.0) phytochrome-associated protein 2 (PAP2); phytochrome-associated protein 2 (PAP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of translation; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 8 (TAIR:AT2G22670.4); Has 2237 Blast hits to 2234 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 2235; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66035 : 196.0) no description available & (q5z749|iaa21_orysa : 186.0) Auxin-responsive protein IAA21 (Indoleacetic acid-induced protein 21) - Oryza sativa (Rice) & (reliability: 468.0) & (original description: Putative IAA8, Description = Auxin-responsive protein IAA8, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf07515_268530-273033' '(at4g32280 : 105.0) Auxin inducible protein.; indole-3-acetic acid inducible 29 (IAA29); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone, response to red light, response to far red light; LOCATED IN: nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 10 (TAIR:AT1G04100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66035 : 102.0) no description available & (p32293|ax22a_phaau : 90.9) Auxin-induced protein 22A (Indole-3-acetic acid-induced protein ARG3) - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 210.0) & (original description: Putative IAA9, Description = Auxin-responsive protein, PFAM = PF02309;PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf07638_229485-236975' '(at4g32280 : 119.0) Auxin inducible protein.; indole-3-acetic acid inducible 29 (IAA29); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone, response to red light, response to far red light; LOCATED IN: nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 10 (TAIR:AT1G04100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66035 : 106.0) no description available & (q5w670|iaa18_orysa : 92.4) Auxin-responsive protein IAA18 (Indoleacetic acid-induced protein 18) - Oryza sativa (Rice) & (reliability: 238.0) & (original description: Putative PGSC0003DMG400020478, Description = Auxin-responsive protein, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf08222_298551-302542' '(p13088|aux22_soybn : 205.0) Auxin-induced protein AUX22 - Glycine max (Soybean) & (gnl|cdd|66035 : 202.0) no description available & (at3g15540 : 166.0) Primary auxin-responsive gene. Involved in the regulation stamen filaments development.; indole-3-acetic acid inducible 19 (IAA19); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: phototropism, gravitropism, response to auxin stimulus, response to brassinosteroid stimulus, stamen filament development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid 6 (TAIR:AT1G52830.1); Has 1781 Blast hits to 1780 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1780; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative AUX22, Description = Auxin-induced protein AUX22, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf10124_165876-169253' '(at4g32280 : 106.0) Auxin inducible protein.; indole-3-acetic acid inducible 29 (IAA29); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone, response to red light, response to far red light; LOCATED IN: nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 10 (TAIR:AT1G04100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66035 : 98.9) no description available & (o24543|ax22e_phaau : 86.7) Auxin-induced protein 22E (Indole-3-acetic acid-induced protein ARG14) - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 212.0) & (original description: Putative PGSC0003DMG400030896, Description = Auxin-responsive protein, PFAM = PF02309;PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf10650_262165-267026' '(at3g16500 : 210.0) phytochrome-associated protein 1 (PAP1); phytochrome-associated protein 1 (PAP1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 18 (TAIR:AT1G51950.1); Has 1982 Blast hits to 1978 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1982; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q5w670|iaa18_orysa : 185.0) Auxin-responsive protein IAA18 (Indoleacetic acid-induced protein 18) - Oryza sativa (Rice) & (gnl|cdd|66035 : 120.0) no description available & (reliability: 420.0) & (original description: Putative IAA26, Description = Auxin-responsive protein IAA26, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf11535_200388-205788' '(at2g33310 : 179.0) Auxin induced gene, IAA13 (IAA13).; auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q59aa1|iaa10_orysa : 161.0) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) - Oryza sativa (Rice) & (gnl|cdd|66035 : 135.0) no description available & (reliability: 358.0) & (original description: Putative IAA13, Description = Auxin-responsive protein IAA13, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf12159_896602-899563' '(gnl|cdd|66035 : 231.0) no description available & (o24542|ax22d_phaau : 212.0) Auxin-induced protein 22D (Indole-3-acetic acid-induced protein ARG13) - Phaseolus aureus (Mung bean) (Vigna radiata) & (at5g43700 : 205.0) Auxin inducible protein similar to transcription factors.; AUXIN INDUCIBLE 2-11 (ATAUX2-11); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 410.0) & (original description: Putative AUX22D, Description = Auxin-induced protein 22D, PFAM = PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf24330_36769-40395' '(gnl|cdd|66035 : 207.0) no description available & (at1g04250 : 206.0) Transcription regulator acting as repressor of auxin-inducible gene expression. Auxin-inducible AUX/IAA gene. Short-lived nuclear protein with four conserved domains. Domain III has homology to beta alpha alpha dimerization and DNA binding domains. Involved in auxin signaling. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components.; AUXIN RESISTANT 3 (AXR3); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 14 (TAIR:AT4G14550.1); Has 1763 Blast hits to 1762 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1762; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (q5vrd1|iaa1_orysa : 181.0) Auxin-responsive protein IAA1 (Indoleacetic acid-induced protein 1) - Oryza sativa (Rice) & (reliability: 412.0) & (original description: Putative IAA17, Description = Auxin-responsive protein IAA17, PFAM = PF02309;PF02309)' T '27.3.40' 'RNA.regulation of transcription.Aux/IAA family' 'niben101scf28593_87629-92462' '(at4g29080 : 268.0) phytochrome-associated protein 2 (PAP2); phytochrome-associated protein 2 (PAP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of translation; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 8 (TAIR:AT2G22670.4); Has 2237 Blast hits to 2234 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 2235; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66035 : 237.0) no description available & (q5z749|iaa21_orysa : 225.0) Auxin-responsive protein IAA21 (Indoleacetic acid-induced protein 21) - Oryza sativa (Rice) & (reliability: 526.0) & (original description: Putative IAA27, Description = Auxin-responsive protein IAA27, PFAM = PF02309)' T '27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben044scf00015075ctg007_1-6795' '(at4g00260 : 121.0) maternal effect embryo arrest 45 (MEE45); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT2G24645.1); Has 539 Blast hits to 263 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative PGSC0003DMG400013589, Description = Putative B3 domain-containing protein REM14-like, PFAM = PF02362;PF02362)' T '27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben044scf00042832ctg005_1-3017' '(at3g18990 : 107.0) Required for vernalization. Essential for the complete repression of FLC in vernalized plants. Required for the methylation of histone H3; REDUCED VERNALIZATION RESPONSE 1 (VRN1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: related to vernalization1 1 (TAIR:AT1G49480.1); Has 683 Blast hits to 597 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 682; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative PGSC0003DMG400040663, Description = Putative B3 domain-containing transcription factor VRN1-like, PFAM = PF02362;PF02362;PF02362)' T '27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben044scf00042884ctg001_108-4576' '(at3g18990 : 117.0) Required for vernalization. Essential for the complete repression of FLC in vernalized plants. Required for the methylation of histone H3; REDUCED VERNALIZATION RESPONSE 1 (VRN1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: related to vernalization1 1 (TAIR:AT1G49480.1); Has 683 Blast hits to 597 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 682; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative PGSC0003DMG400002784, Description = Putative B3 domain-containing transcription factor VRN1-like, PFAM = PF02362;PF02362;PF02362)' T '27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf00034_121441-128484' '(at3g18990 : 121.0) Required for vernalization. Essential for the complete repression of FLC in vernalized plants. Required for the methylation of histone H3; REDUCED VERNALIZATION RESPONSE 1 (VRN1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: related to vernalization1 1 (TAIR:AT1G49480.1); Has 683 Blast hits to 597 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 682; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative PGSC0003DMG400046509, Description = Putative B3 domain-containing transcription factor VRN1-like, PFAM = PF02362;PF02362;PF02362;PF02362;PF02362)' T '27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf00034_121477-164488' '(at3g18990 : 119.0) Required for vernalization. Essential for the complete repression of FLC in vernalized plants. Required for the methylation of histone H3; REDUCED VERNALIZATION RESPONSE 1 (VRN1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: related to vernalization1 1 (TAIR:AT1G49480.1); Has 683 Blast hits to 597 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 682; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative PGSC0003DMG400046509, Description = Putative B3 domain-containing transcription factor VRN1-like, PFAM = PF02362;PF02362;PF02362;PF02362)' T '27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf00034_213053-219516' '(at3g18990 : 129.0) Required for vernalization. Essential for the complete repression of FLC in vernalized plants. Required for the methylation of histone H3; REDUCED VERNALIZATION RESPONSE 1 (VRN1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: related to vernalization1 1 (TAIR:AT1G49480.1); Has 683 Blast hits to 597 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 682; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative PGSC0003DMG400040663, Description = Putative B3 domain-containing transcription factor VRN1-like, PFAM = PF02362;PF02362;PF02362)' T '27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf00905_913743-923631' '(at4g00260 : 134.0) maternal effect embryo arrest 45 (MEE45); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT2G24645.1); Has 539 Blast hits to 263 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative PGSC0003DMG400043722, Description = Putative B3 domain-containing protein REM14-like, PFAM = PF02362;PF02362;PF02362)' T '27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf01209_514267-521495' '(at3g18990 : 99.0) Required for vernalization. Essential for the complete repression of FLC in vernalized plants. Required for the methylation of histone H3; REDUCED VERNALIZATION RESPONSE 1 (VRN1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: related to vernalization1 1 (TAIR:AT1G49480.1); Has 683 Blast hits to 597 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 682; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative PGSC0003DMG400014537, Description = Putative ovule protein, PFAM = PF02362)' T '27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf01784_761928-765737' '(at2g24645 : 90.1) Transcriptional factor B3 family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT4G00260.1). & (reliability: 180.2) & (original description: Putative PGSC0003DMG403024846, Description = , PFAM = PF02362;PF02362)' T '27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf02322_793553-801053' '(at3g18990 : 87.8) Required for vernalization. Essential for the complete repression of FLC in vernalized plants. Required for the methylation of histone H3; REDUCED VERNALIZATION RESPONSE 1 (VRN1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: related to vernalization1 1 (TAIR:AT1G49480.1); Has 683 Blast hits to 597 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 682; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative , Description = Putative B3 domain-containing protein-like, PFAM = PF02362;PF02362;PF02362)' T '27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf03502_29813-34144' '(at3g18990 : 114.0) Required for vernalization. Essential for the complete repression of FLC in vernalized plants. Required for the methylation of histone H3; REDUCED VERNALIZATION RESPONSE 1 (VRN1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: related to vernalization1 1 (TAIR:AT1G49480.1); Has 683 Blast hits to 597 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 682; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative PGSC0003DMG400040663, Description = Putative B3 domain-containing transcription factor VRN1-like, PFAM = PF02362;PF02362;PF02362)' T '27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf04436_664119-669140' '(at5g58280 : 195.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G19184.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative At5g58280, Description = Putative B3 domain-containing protein At5g58280, PFAM = PF02362)' T '27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf04748_173063-179426' '(at4g00260 : 84.7) maternal effect embryo arrest 45 (MEE45); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT2G24645.1); Has 539 Blast hits to 263 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative PGSC0003DMG400009538, Description = Putative ovule protein, PFAM = PF02362)' T '27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf04748_197111-209131' '(at1g26680 : 162.0) transcriptional factor B3 family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: ovule, embryo; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT2G24645.1); Has 880 Blast hits to 315 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 864; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative PGSC0003DMG402009541, Description = Putative B3 domain-containing protein REM14-like, PFAM = PF02362;PF02362;PF02362;PF02362)' T '27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf04748_226961-250938' '(at1g26680 : 188.0) transcriptional factor B3 family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: ovule, embryo; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT2G24645.1); Has 880 Blast hits to 315 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 864; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative PGSC0003DMG400009538, Description = Putative ovule protein, PFAM = PF02362;PF02362;PF02362;PF02362)' T '27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf04748_258085-265276' '(at4g00260 : 150.0) maternal effect embryo arrest 45 (MEE45); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT2G24645.1); Has 539 Blast hits to 263 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative PGSC0003DMG400009538, Description = Putative ovule protein, PFAM = PF02362;PF02362;PF02362)' T '27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf05674_477850-481552' '(at4g33280 : 118.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G18990.1); Has 674 Blast hits to 576 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 674; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative PGSC0003DMG400010079, Description = , PFAM = PF02362;PF02362)' T '27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf06916_129897-151330' '(at3g18990 : 90.5) Required for vernalization. Essential for the complete repression of FLC in vernalized plants. Required for the methylation of histone H3; REDUCED VERNALIZATION RESPONSE 1 (VRN1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: related to vernalization1 1 (TAIR:AT1G49480.1); Has 683 Blast hits to 597 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 682; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative PGSC0003DMG400014537, Description = AP2/B3-like transcriptional factor family protein, putative, PFAM = PF02362;PF02362)' T '27.3.41' 'RNA.regulation of transcription.B3 transcription factor family' 'niben101scf09698_227598-231925' '(at3g18990 : 99.0) Required for vernalization. Essential for the complete repression of FLC in vernalized plants. Required for the methylation of histone H3; REDUCED VERNALIZATION RESPONSE 1 (VRN1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: related to vernalization1 1 (TAIR:AT1G49480.1); Has 683 Blast hits to 597 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 682; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative PGSC0003DMG400014537, Description = Putative ovule protein, PFAM = PF02362)' T '27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'nbv0.3scaffold25676_22023-28375' '(at2g44430 : 204.0) DNA-binding bromodomain-containing protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: stem, male gametophyte, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Bromodomain (InterPro:IPR001487), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT3G60110.1); Has 27183 Blast hits to 17808 proteins in 1233 species: Archae - 48; Bacteria - 2443; Metazoa - 11960; Fungi - 2852; Plants - 1222; Viruses - 306; Other Eukaryotes - 8352 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative BnaC04g22430D, Description = BnaC04g22430D protein, PFAM = PF00439;PF00249)' T '27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'nbv0.3scaffold81788_1-6813' '(at1g20670 : 336.0) DNA-binding bromodomain-containing protein; CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G76380.2); Has 11096 Blast hits to 8233 proteins in 323 species: Archae - 0; Bacteria - 121; Metazoa - 4363; Fungi - 1457; Plants - 677; Viruses - 7; Other Eukaryotes - 4471 (source: NCBI BLink). & (gnl|cdd|36173 : 194.0) no description available & (gnl|cdd|47625 : 106.0) no description available & (reliability: 672.0) & (original description: Putative At1g76380, Description = At1g76380, PFAM = PF00439)' T '27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'nbv0.5scaffold71_963772-969223' '(at1g20670 : 119.0) DNA-binding bromodomain-containing protein; CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G76380.2); Has 11096 Blast hits to 8233 proteins in 323 species: Archae - 0; Bacteria - 121; Metazoa - 4363; Fungi - 1457; Plants - 677; Viruses - 7; Other Eukaryotes - 4471 (source: NCBI BLink). & (gnl|cdd|36173 : 91.6) no description available & (gnl|cdd|47625 : 85.0) no description available & (reliability: 238.0) & (original description: Putative BnaC05g16030D, Description = BnaC05g16030D protein, PFAM = PF00439)' T '27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'nbv0.5scaffold248_215985-228759' '(at1g58025 : 102.0) DNA-binding bromodomain-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: nuclear protein X1 (TAIR:AT5G63320.1). & (reliability: 204.0) & (original description: Putative PGSC0003DMG400024917, Description = Histone acetyltransferase gcn5, PFAM = )' T '27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'niben044scf00003113ctg003_32-3722' '(at2g44430 : 94.4) DNA-binding bromodomain-containing protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: stem, male gametophyte, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Bromodomain (InterPro:IPR001487), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT3G60110.1); Has 27183 Blast hits to 17808 proteins in 1233 species: Archae - 48; Bacteria - 2443; Metazoa - 11960; Fungi - 2852; Plants - 1222; Viruses - 306; Other Eukaryotes - 8352 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative , Description = DNA-binding bromodomain-containing family protein, PFAM = PF00439)' T '27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'niben044scf00003266ctg013_1-6030' '(at1g20670 : 307.0) DNA-binding bromodomain-containing protein; CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G76380.2); Has 11096 Blast hits to 8233 proteins in 323 species: Archae - 0; Bacteria - 121; Metazoa - 4363; Fungi - 1457; Plants - 677; Viruses - 7; Other Eukaryotes - 4471 (source: NCBI BLink). & (gnl|cdd|36173 : 197.0) no description available & (gnl|cdd|47625 : 105.0) no description available & (reliability: 614.0) & (original description: Putative BnaC07g15240D, Description = BnaC07g15240D protein, PFAM = PF00439)' T '27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'niben044scf00006577ctg019_1-6495' '(at1g20670 : 335.0) DNA-binding bromodomain-containing protein; CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G76380.2); Has 11096 Blast hits to 8233 proteins in 323 species: Archae - 0; Bacteria - 121; Metazoa - 4363; Fungi - 1457; Plants - 677; Viruses - 7; Other Eukaryotes - 4471 (source: NCBI BLink). & (gnl|cdd|36173 : 194.0) no description available & (gnl|cdd|47625 : 106.0) no description available & (reliability: 670.0) & (original description: Putative BnaC08g19400D, Description = BnaC08g19400D protein, PFAM = PF00439)' T '27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'niben044scf00025632ctg008_2212-9259' '(at2g44430 : 221.0) DNA-binding bromodomain-containing protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: stem, male gametophyte, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Bromodomain (InterPro:IPR001487), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT3G60110.1); Has 27183 Blast hits to 17808 proteins in 1233 species: Archae - 48; Bacteria - 2443; Metazoa - 11960; Fungi - 2852; Plants - 1222; Viruses - 306; Other Eukaryotes - 8352 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative BnaA05g03970D, Description = BnaA05g03970D protein, PFAM = PF00249;PF00439)' T '27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'niben101scf00180_274888-280546' '(at1g61215 : 238.0) Bromodomain protein with a DNA binding motif; bromodomain 4 (BRD4); CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT2G44430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 476.0) & (original description: Putative PGSC0003DMG400022422, Description = Bromodomain protein, PFAM = PF00439;PF00249)' T '27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'niben101scf00712_1233216-1240151' '(at1g20670 : 313.0) DNA-binding bromodomain-containing protein; CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G76380.2); Has 11096 Blast hits to 8233 proteins in 323 species: Archae - 0; Bacteria - 121; Metazoa - 4363; Fungi - 1457; Plants - 677; Viruses - 7; Other Eukaryotes - 4471 (source: NCBI BLink). & (gnl|cdd|36173 : 205.0) no description available & (gnl|cdd|47625 : 106.0) no description available & (reliability: 626.0) & (original description: Putative BnaC07g15240D, Description = BnaC07g15240D protein, PFAM = PF00439)' T '27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'niben101scf00742_261886-267328' '(at1g61215 : 232.0) Bromodomain protein with a DNA binding motif; bromodomain 4 (BRD4); CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT2G44430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 464.0) & (original description: Putative PGSC0003DMG400022422, Description = Bromodomain protein, PFAM = PF00249;PF00439)' T '27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'niben101scf03863_707863-713439' '(at3g57980 : 145.0) DNA-binding bromodomain-containing protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Bromodomain (InterPro:IPR001487), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT2G42150.1); Has 5050 Blast hits to 3932 proteins in 403 species: Archae - 12; Bacteria - 304; Metazoa - 2409; Fungi - 569; Plants - 345; Viruses - 12; Other Eukaryotes - 1399 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative TCM_024895, Description = DNA-binding bromodomain-containing protein, putative, PFAM = PF00249;PF00439)' T '27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'niben101scf04071_75595-84160' '(at2g44430 : 210.0) DNA-binding bromodomain-containing protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: stem, male gametophyte, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Bromodomain (InterPro:IPR001487), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT3G60110.1); Has 27183 Blast hits to 17808 proteins in 1233 species: Archae - 48; Bacteria - 2443; Metazoa - 11960; Fungi - 2852; Plants - 1222; Viruses - 306; Other Eukaryotes - 8352 (source: NCBI BLink). & (reliability: 420.0) & (original description: Putative At2g44430, Description = At2g44430, PFAM = PF00249;PF00439)' T '27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'niben101scf04197_78284-86786' '(at1g58025 : 214.0) DNA-binding bromodomain-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: nuclear protein X1 (TAIR:AT5G63320.1). & (gnl|cdd|36687 : 113.0) no description available & (reliability: 428.0) & (original description: Putative BRD1503, Description = Bromodomain-containing factor 2, PFAM = PF00439)' T '27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'niben101scf05822_371917-377368' '(at1g20670 : 123.0) DNA-binding bromodomain-containing protein; CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G76380.2); Has 11096 Blast hits to 8233 proteins in 323 species: Archae - 0; Bacteria - 121; Metazoa - 4363; Fungi - 1457; Plants - 677; Viruses - 7; Other Eukaryotes - 4471 (source: NCBI BLink). & (gnl|cdd|36173 : 92.0) no description available & (gnl|cdd|47625 : 84.6) no description available & (reliability: 246.0) & (original description: Putative BnaC05g16030D, Description = BnaC05g16030D protein, PFAM = PF00439)' T '27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'niben101scf09417_52565-56883' '(at2g44430 : 95.5) DNA-binding bromodomain-containing protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: stem, male gametophyte, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Bromodomain (InterPro:IPR001487), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT3G60110.1); Has 27183 Blast hits to 17808 proteins in 1233 species: Archae - 48; Bacteria - 2443; Metazoa - 11960; Fungi - 2852; Plants - 1222; Viruses - 306; Other Eukaryotes - 8352 (source: NCBI BLink). & (reliability: 191.0) & (original description: Putative , Description = DNA-binding bromodomain-containing family protein, PFAM = PF00439)' T '27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'niben101scf12935_50897-58612' '(at1g20670 : 331.0) DNA-binding bromodomain-containing protein; CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G76380.2); Has 11096 Blast hits to 8233 proteins in 323 species: Archae - 0; Bacteria - 121; Metazoa - 4363; Fungi - 1457; Plants - 677; Viruses - 7; Other Eukaryotes - 4471 (source: NCBI BLink). & (gnl|cdd|36173 : 191.0) no description available & (gnl|cdd|47625 : 106.0) no description available & (reliability: 662.0) & (original description: Putative At1g76380, Description = At1g76380, PFAM = PF00439)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold1510_15151-23824' '(at4g34430 : 486.0) Member of a small family of SWI3-like genes in Arabidopsis. Referred to as CHB4 in Zhou et al. (2002).; CHB3; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SWIRM (InterPro:IPR007526), SANT, eukarya (InterPro:IPR017884), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: SWITCH/sucrose nonfermenting 3C (TAIR:AT1G21700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36493 : 184.0) no description available & (gnl|cdd|34856 : 174.0) no description available & (reliability: 972.0) & (original description: Putative SWI3D, Description = SWI/SNF complex subunit SWI3D, PFAM = PF00569;PF16495;PF00249;PF04433)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold4124_25478-37097' '(at5g22750 : 1194.0) DNA repair gene. gamma-radiation hypersensitive (RAD5) involved in stable transformation and T-DNA transfer; RAD5; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: embryo, sperm cell, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Helicase protein with RING/U-box domain (TAIR:AT5G43530.1); Has 27107 Blast hits to 18179 proteins in 1771 species: Archae - 108; Bacteria - 7266; Metazoa - 8140; Fungi - 5089; Plants - 2446; Viruses - 173; Other Eukaryotes - 3885 (source: NCBI BLink). & (gnl|cdd|36219 : 497.0) no description available & (gnl|cdd|84584 : 188.0) no description available & (q7g8y3|isw2_orysa : 103.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2388.0) & (original description: Putative Os04g0177300, Description = Os04g0177300 protein, PFAM = PF00271;PF00176;PF13920)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold8510_1-9557' '(at4g22140 : 314.0) EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72854 : 139.0) no description available & (gnl|cdd|37097 : 123.0) no description available & (reliability: 628.0) & (original description: Putative ebs, Description = BAH-PHD domain-containing protein, PFAM = PF01426;PF00628)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold9938_1255-38370' '(at2g40770 : 1082.0) zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, nucleic acid binding, ATP binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT1G61140.1); Has 20880 Blast hits to 12947 proteins in 1504 species: Archae - 88; Bacteria - 5732; Metazoa - 4955; Fungi - 5171; Plants - 2134; Viruses - 115; Other Eukaryotes - 2685 (source: NCBI BLink). & (gnl|cdd|35519 : 556.0) no description available & (gnl|cdd|30899 : 82.9) no description available & (reliability: 2164.0) & (original description: Putative SHPRH, Description = E3 ubiquitin-protein ligase SHPRH, PFAM = PF00097;PF00176;PF00271)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold11746_1654-13622' '(at1g08600 : 380.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (gnl|cdd|36233 : 284.0) no description available & (reliability: 760.0) & (original description: Putative ATRX, Description = Transcriptional regulator ATRX, PFAM = PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold20499_1-6867' '(at5g20420 : 1103.0) chromatin remodeling 42 (CHR42); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: shoot apex, embryo, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 38 (TAIR:AT3G42670.1); Has 13786 Blast hits to 12302 proteins in 1638 species: Archae - 85; Bacteria - 4157; Metazoa - 3202; Fungi - 3141; Plants - 1285; Viruses - 57; Other Eukaryotes - 1859 (source: NCBI BLink). & (gnl|cdd|35611 : 501.0) no description available & (gnl|cdd|30899 : 105.0) no description available & (reliability: 2206.0) & (original description: Putative CLSY2, Description = SNF2 domain-containing protein CLASSY 2, PFAM = PF00271;PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold24923_16184-27176' '(at1g49520 : 169.0) SWIB complex BAF60b domain-containing protein; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121), SWIB domain (InterPro:IPR019835), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: SWIB complex BAF60b domain-containing protein (TAIR:AT3G19080.1); Has 3197 Blast hits to 1975 proteins in 305 species: Archae - 0; Bacteria - 439; Metazoa - 696; Fungi - 468; Plants - 732; Viruses - 19; Other Eukaryotes - 843 (source: NCBI BLink). & (gnl|cdd|37157 : 115.0) no description available & (gnl|cdd|47490 : 106.0) no description available & (reliability: 338.0) & (original description: Putative At3g19080, Description = Upstream activation factor subunit spp27, PFAM = PF08766;PF02201;PF02201)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold26811_20780-26030' '(at2g33610 : 227.0) Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Interacts with BSH, AtSWI3A, SWI3C and FCA. Expressed ubiquitously.; switch subunit 3 (SWI3B); FUNCTIONS IN: DNA binding; INVOLVED IN: chromatin remodeling; LOCATED IN: SWI/SNF complex, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SWIRM (InterPro:IPR007526), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: SWITCH/sucrose nonfermenting 3C (TAIR:AT1G21700.1); Has 1055 Blast hits to 780 proteins in 192 species: Archae - 0; Bacteria - 2; Metazoa - 438; Fungi - 310; Plants - 199; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|36493 : 110.0) no description available & (gnl|cdd|34856 : 95.5) no description available & (reliability: 454.0) & (original description: Putative CHB2, Description = SWI/SNF complex subunit SWI3B, PFAM = PF00249)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold28724_12848-22437' '(at3g19080 : 219.0) SWIB complex BAF60b domain-containing protein; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121), SWIB domain (InterPro:IPR019835), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: SWIB complex BAF60b domain-containing protein (TAIR:AT1G49520.1); Has 4780 Blast hits to 2475 proteins in 346 species: Archae - 0; Bacteria - 702; Metazoa - 1207; Fungi - 636; Plants - 993; Viruses - 61; Other Eukaryotes - 1181 (source: NCBI BLink). & (gnl|cdd|37157 : 118.0) no description available & (gnl|cdd|47490 : 107.0) no description available & (reliability: 412.0) & (original description: Putative RCOM_0602170, Description = Upstream activation factor subunit UAF30, putative, PFAM = PF08766;PF02201;PF02201)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold29630_9266-25435' '(at1g50410 : 910.0) SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, nucleic acid binding, ATP binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT3G20010.1); Has 25748 Blast hits to 15874 proteins in 1868 species: Archae - 87; Bacteria - 8136; Metazoa - 6127; Fungi - 5385; Plants - 2378; Viruses - 150; Other Eukaryotes - 3485 (source: NCBI BLink). & (gnl|cdd|36219 : 424.0) no description available & (gnl|cdd|30899 : 132.0) no description available & (q7g8y3|isw2_orysa : 88.6) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1820.0) & (original description: Putative CHR28, Description = Helicase-like transcription factor CHR28, PFAM = PF13920;PF00271;PF00176;PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold30046_1066-24208' '(at3g12810 : 1660.0) Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).; PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: SWI/SNF complex, cell wall, chromatin remodeling complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: HSA (InterPro:IPR006562), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), SNF2-related (InterPro:IPR000330), MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: INO80 ortholog (TAIR:AT3G57300.1); Has 42311 Blast hits to 26312 proteins in 2357 species: Archae - 246; Bacteria - 10217; Metazoa - 11172; Fungi - 7336; Plants - 2916; Viruses - 500; Other Eukaryotes - 9924 (source: NCBI BLink). & (gnl|cdd|35612 : 579.0) no description available & (gnl|cdd|84584 : 321.0) no description available & (q7g8y3|isw2_orysa : 271.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 3320.0) & (original description: Putative PIE1, Description = DEAD/DEAH box helicase domain-containing protein PIE1, PFAM = PF07529;PF00271;PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold33819_13592-26829' '(at2g46020 : 1479.0) Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D.; BRAHMA (BRM); FUNCTIONS IN: helicase activity, transcription regulator activity, DNA binding, ATP binding; INVOLVED IN: ATP-dependent chromatin remodeling, organ boundary specification between lateral organs and the meristem, regulation of gene expression, epigenetic; LOCATED IN: cytosol, nucleus, chromatin remodeling complex; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Bromodomain (InterPro:IPR001487), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35607 : 682.0) no description available & (q7g8y3|isw2_orysa : 329.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|84584 : 313.0) no description available & (reliability: 2958.0) & (original description: Putative chr122, Description = Chromatin complex subunit A, PFAM = PF00271;PF08880;PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold44237_8797-25214' '(at3g54280 : 509.0) ROOT GROWTH DEFECTIVE 3 (RGD3); FUNCTIONS IN: helicase activity, binding, DNA binding, nucleic acid binding, ATP binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), DEAD-like helicase, N-terminal (InterPro:IPR014001), Armadillo-type fold (InterPro:IPR016024), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1). & (gnl|cdd|35613 : 295.0) no description available & (reliability: 1018.0) & (original description: Putative v1g145718, Description = Predicted protein, PFAM = )' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold49594_658-6910' '(at1g05120 : 362.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G02670.1); Has 29218 Blast hits to 14448 proteins in 1607 species: Archae - 124; Bacteria - 8622; Metazoa - 6656; Fungi - 6694; Plants - 2674; Viruses - 189; Other Eukaryotes - 4259 (source: NCBI BLink). & (gnl|cdd|36220 : 362.0) no description available & (gnl|cdd|30899 : 141.0) no description available & (reliability: 724.0) & (original description: Putative rhp16, Description = DNA repair protein RAD16, PFAM = PF00097;PF00271)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold54586_3650-12377' '(at4g22140 : 347.0) EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72854 : 144.0) no description available & (gnl|cdd|37097 : 123.0) no description available & (reliability: 694.0) & (original description: Putative EBS, Description = Chromatin remodeling protein EBS, PFAM = PF01426;PF00628)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold62326_9793-20802' '(at3g54280 : 1662.0) ROOT GROWTH DEFECTIVE 3 (RGD3); FUNCTIONS IN: helicase activity, binding, DNA binding, nucleic acid binding, ATP binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), DEAD-like helicase, N-terminal (InterPro:IPR014001), Armadillo-type fold (InterPro:IPR016024), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1). & (gnl|cdd|35613 : 1231.0) no description available & (gnl|cdd|30899 : 307.0) no description available & (q7g8y3|isw2_orysa : 203.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 3324.0) & (original description: Putative BTAF1, Description = TATA-binding protein-associated factor 172, PFAM = PF00176;PF12054;PF00271)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold66185_1-6837' '(at4g22140 : 364.0) EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72854 : 152.0) no description available & (gnl|cdd|37097 : 126.0) no description available & (reliability: 728.0) & (original description: Putative EBS, Description = Chromatin remodeling protein EBS, PFAM = PF01426;PF00628)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold85078_1344-5868' '(at3g17590 : 237.0) Encodes the Arabidopsis homologue of yeast SNF5 and represents a conserved subunit of plant SWI/SNF complexes.; BUSHY GROWTH (BSH); CONTAINS InterPro DOMAIN/s: SNF5/SMARCB1/INI1 (InterPro:IPR006939). & (gnl|cdd|36862 : 128.0) no description available & (reliability: 474.0) & (original description: Putative BSH, Description = Bushy growth protein, PFAM = PF04855)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold89048_1139-8335' '(at3g06400 : 558.0) Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature.; chromatin-remodeling protein 11 (CHR11); FUNCTIONS IN: in 7 functions; INVOLVED IN: cell growth, embryo sac development; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), SLIDE (InterPro:IPR015195), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2). & (q7g8y3|isw2_orysa : 538.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35606 : 377.0) no description available & (gnl|cdd|84584 : 254.0) no description available & (reliability: 1116.0) & (original description: Putative isw, Description = ISWI chromatin-remodeling complex ATPase ISW2, PFAM = PF13892;PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.3scaffold138409_1-1359' '(at1g08600 : 101.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (reliability: 202.0) & (original description: Putative ATRX, Description = Transcriptional regulator ATRX, PFAM = )' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold1127_200599-210291' '(at5g05130 : 996.0) DNA/RNA helicase protein; FUNCTIONS IN: in 6 functions; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36219 : 403.0) no description available & (gnl|cdd|30899 : 206.0) no description available & (q7g8y3|isw2_orysa : 97.4) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1992.0) & (original description: Putative hltf, Description = Helicase-like transcription factor, PFAM = PF08797;PF00097;PF00271;PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold1142_202126-212935' '(at2g18760 : 1379.0) chromatin remodeling 8 (CHR8); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: DNA repair, response to gamma radiation; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 24 (TAIR:AT5G63950.1); Has 17230 Blast hits to 14463 proteins in 1653 species: Archae - 99; Bacteria - 4180; Metazoa - 3846; Fungi - 4219; Plants - 1677; Viruses - 118; Other Eukaryotes - 3091 (source: NCBI BLink). & (gnl|cdd|35608 : 832.0) no description available & (gnl|cdd|30899 : 297.0) no description available & (q7g8y3|isw2_orysa : 237.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2758.0) & (original description: Putative CHR8, Description = Protein CHROMATIN REMODELING 8, PFAM = PF00176;PF00271)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold1142_205760-211502' '(at2g18760 : 825.0) chromatin remodeling 8 (CHR8); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: DNA repair, response to gamma radiation; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 24 (TAIR:AT5G63950.1); Has 17230 Blast hits to 14463 proteins in 1653 species: Archae - 99; Bacteria - 4180; Metazoa - 3846; Fungi - 4219; Plants - 1677; Viruses - 118; Other Eukaryotes - 3091 (source: NCBI BLink). & (gnl|cdd|35608 : 670.0) no description available & (gnl|cdd|84584 : 277.0) no description available & (q7g8y3|isw2_orysa : 215.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1650.0) & (original description: Putative ercc6, Description = DNA excision repair protein ERCC-6, PFAM = PF00176;PF00271)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold1857_134121-170819' '(gnl|cdd|35613 : 1382.0) no description available & (at3g54280 : 1227.0) ROOT GROWTH DEFECTIVE 3 (RGD3); FUNCTIONS IN: helicase activity, binding, DNA binding, nucleic acid binding, ATP binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), DEAD-like helicase, N-terminal (InterPro:IPR014001), Armadillo-type fold (InterPro:IPR016024), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1). & (gnl|cdd|30899 : 313.0) no description available & (q7g8y3|isw2_orysa : 211.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2454.0) & (original description: Putative mot1, Description = TATA-binding protein-associated factor 172, PFAM = PF12054;PF12054;PF00271;PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold2153_268508-310446' '(at1g08600 : 1468.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (gnl|cdd|36233 : 1050.0) no description available & (gnl|cdd|84584 : 223.0) no description available & (q7g8y3|isw2_orysa : 166.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2936.0) & (original description: Putative ATRX, Description = Protein CHROMATIN REMODELING 20, PFAM = PF00271;PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold2153_294278-310413' '(at1g08600 : 464.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (gnl|cdd|36233 : 304.0) no description available & (reliability: 928.0) & (original description: Putative ATRX, Description = Transcriptional regulator ATRX, PFAM = )' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold2159_169605-315776' '(at3g17590 : 243.0) Encodes the Arabidopsis homologue of yeast SNF5 and represents a conserved subunit of plant SWI/SNF complexes.; BUSHY GROWTH (BSH); CONTAINS InterPro DOMAIN/s: SNF5/SMARCB1/INI1 (InterPro:IPR006939). & (gnl|cdd|36862 : 172.0) no description available & (gnl|cdd|68430 : 108.0) no description available & (reliability: 486.0) & (original description: Putative BSH, Description = Bushy growth protein, PFAM = PF04855;PF04855)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold2304_21668-34257' '(at3g06400 : 1640.0) Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature.; chromatin-remodeling protein 11 (CHR11); FUNCTIONS IN: in 7 functions; INVOLVED IN: cell growth, embryo sac development; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), SLIDE (InterPro:IPR015195), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2). & (q7g8y3|isw2_orysa : 1592.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35606 : 1088.0) no description available & (gnl|cdd|84584 : 338.0) no description available & (reliability: 3280.0) & (original description: Putative CHR11, Description = ISWI chromatin-remodeling complex ATPase CHR11, PFAM = PF09111;PF09110;PF00176;PF00271)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold2433_34224-84731' '(at2g40770 : 1627.0) zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, nucleic acid binding, ATP binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT1G61140.1); Has 20880 Blast hits to 12947 proteins in 1504 species: Archae - 88; Bacteria - 5732; Metazoa - 4955; Fungi - 5171; Plants - 2134; Viruses - 115; Other Eukaryotes - 2685 (source: NCBI BLink). & (gnl|cdd|35519 : 798.0) no description available & (gnl|cdd|84584 : 100.0) no description available & (reliability: 3254.0) & (original description: Putative SHPRH, Description = E3 ubiquitin-protein ligase SHPRH, PFAM = PF00097;PF00271;PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold3526_118272-122173' '(at5g14170 : 519.0) CHC1 is predicted to encode a protein that belongs to the chromodomain remodeling complex. Two RNAi knock-down lines have a dwarf phenotype and reduced rates of Agrobacterium-mediated transformation. The low rate of root-mediated transformation rate may result from altered root morphology or reduced root growth rates.; CHC1; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121); BEST Arabidopsis thaliana protein match is: SWIB/MDM2 domain superfamily protein (TAIR:AT3G01890.1); Has 1254 Blast hits to 1169 proteins in 258 species: Archae - 0; Bacteria - 112; Metazoa - 460; Fungi - 424; Plants - 177; Viruses - 4; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|37781 : 388.0) no description available & (reliability: 1038.0) & (original description: Putative At5g14170, Description = SWI/SNF complex component SNF12 homolog, PFAM = PF02201)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold4859_109013-136152' '(at5g63950 : 975.0) chromatin remodeling 24 (CHR24); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 8 (TAIR:AT2G18760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35608 : 645.0) no description available & (gnl|cdd|30899 : 258.0) no description available & (q7g8y3|isw2_orysa : 200.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1950.0) & (original description: Putative CHR24, Description = Protein CHROMATIN REMODELING 24, PFAM = PF00271;PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold5023_58454-71691' '(at2g46020 : 2061.0) Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D.; BRAHMA (BRM); FUNCTIONS IN: helicase activity, transcription regulator activity, DNA binding, ATP binding; INVOLVED IN: ATP-dependent chromatin remodeling, organ boundary specification between lateral organs and the meristem, regulation of gene expression, epigenetic; LOCATED IN: cytosol, nucleus, chromatin remodeling complex; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Bromodomain (InterPro:IPR001487), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35607 : 726.0) no description available & (q7g8y3|isw2_orysa : 326.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|84584 : 311.0) no description available & (reliability: 4122.0) & (original description: Putative BRM, Description = ATP-dependent helicase BRM, PFAM = PF08880;PF00271;PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold5805_1-6867' '(at5g20420 : 1085.0) chromatin remodeling 42 (CHR42); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: shoot apex, embryo, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 38 (TAIR:AT3G42670.1); Has 13786 Blast hits to 12302 proteins in 1638 species: Archae - 85; Bacteria - 4157; Metazoa - 3202; Fungi - 3141; Plants - 1285; Viruses - 57; Other Eukaryotes - 1859 (source: NCBI BLink). & (gnl|cdd|35611 : 501.0) no description available & (gnl|cdd|30899 : 106.0) no description available & (reliability: 2170.0) & (original description: Putative CLSY2, Description = SNF2 domain-containing protein CLASSY 2, PFAM = PF00271;PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold5868_32677-39552' '(at4g22140 : 287.0) EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72854 : 121.0) no description available & (gnl|cdd|37097 : 98.2) no description available & (reliability: 574.0) & (original description: Putative ebs, Description = BAH-PHD domain-containing protein, PFAM = PF00628;PF01426;PF03732)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold7303_41785-51047' '(at4g22140 : 314.0) EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72854 : 137.0) no description available & (gnl|cdd|37097 : 124.0) no description available & (reliability: 628.0) & (original description: Putative SHL, Description = Chromatin remodeling protein SHL, PFAM = PF00628;PF01426)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold7904_5047-23577' '(at1g08060 : 142.0) MORPHEUS MOLECULE (MOM); INVOLVED IN: chromatin silencing; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: chromatin remodeling 4 (TAIR:AT5G44800.1); Has 8505 Blast hits to 7857 proteins in 726 species: Archae - 6; Bacteria - 999; Metazoa - 3217; Fungi - 2019; Plants - 785; Viruses - 95; Other Eukaryotes - 1384 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative , Description = Putative helicase protein MOM1-like, PFAM = )' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'nbv0.5scaffold8314_37996-43181' '(at2g33610 : 226.0) Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Interacts with BSH, AtSWI3A, SWI3C and FCA. Expressed ubiquitously.; switch subunit 3 (SWI3B); FUNCTIONS IN: DNA binding; INVOLVED IN: chromatin remodeling; LOCATED IN: SWI/SNF complex, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SWIRM (InterPro:IPR007526), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: SWITCH/sucrose nonfermenting 3C (TAIR:AT1G21700.1); Has 1055 Blast hits to 780 proteins in 192 species: Archae - 0; Bacteria - 2; Metazoa - 438; Fungi - 310; Plants - 199; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|36493 : 110.0) no description available & (gnl|cdd|34856 : 96.7) no description available & (reliability: 452.0) & (original description: Putative CHB2, Description = SWI/SNF complex subunit SWI3B, PFAM = PF00249)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00002401ctg002_5227-10035' '(at3g06400 : 119.0) Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature.; chromatin-remodeling protein 11 (CHR11); FUNCTIONS IN: in 7 functions; INVOLVED IN: cell growth, embryo sac development; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), SLIDE (InterPro:IPR015195), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2). & (q7g8y3|isw2_orysa : 107.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 238.0) & (original description: Putative CHR11, Description = Putative chromatin-remodeling complex ATPase chain, PFAM = )' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00003771ctg001_2293-17080' '(at1g08600 : 597.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (gnl|cdd|36233 : 470.0) no description available & (gnl|cdd|84584 : 185.0) no description available & (q7g8y3|isw2_orysa : 85.1) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1194.0) & (original description: Putative ATRX, Description = ATRX, PFAM = PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00004464ctg012_1353-15710' '(at1g08600 : 282.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (gnl|cdd|36233 : 189.0) no description available & (reliability: 564.0) & (original description: Putative ATRX, Description = Transcriptional regulator ATRX, PFAM = )' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00006803ctg018_12995-15909' '(at1g21700 : 111.0) a member of the Arabidopsis SWI3 gene family. Protein physically interacts with ATSWI3B and ATSWI3A, the other two members of the SWI3 family. Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Referred to as CHB3 in Zhou et al (2003).; SWITCH/sucrose nonfermenting 3C (SWI3C); FUNCTIONS IN: DNA binding; INVOLVED IN: chromatin remodeling; LOCATED IN: SWI/SNF complex, chromatin remodeling complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SWIRM (InterPro:IPR007526), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: DNA-binding family protein (TAIR:AT4G34430.3); Has 4703 Blast hits to 3623 proteins in 273 species: Archae - 0; Bacteria - 43; Metazoa - 1892; Fungi - 779; Plants - 380; Viruses - 2; Other Eukaryotes - 1607 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative CHB4, Description = SWI/SNF complex subunit SWI3C, PFAM = )' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00007499ctg001_13919-21284' '(at5g05130 : 996.0) DNA/RNA helicase protein; FUNCTIONS IN: in 6 functions; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36219 : 402.0) no description available & (gnl|cdd|30899 : 206.0) no description available & (q7g8y3|isw2_orysa : 97.4) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1992.0) & (original description: Putative hltf, Description = Helicase-like transcription factor, PFAM = PF00271;PF08797;PF00097;PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00012517ctg003_1-6035' '(at1g05490 : 509.0) chromatin remodeling 31 (chr31); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 40 (TAIR:AT3G24340.1); Has 38115 Blast hits to 26256 proteins in 2107 species: Archae - 207; Bacteria - 10267; Metazoa - 11226; Fungi - 5719; Plants - 1929; Viruses - 244; Other Eukaryotes - 8523 (source: NCBI BLink). & (gnl|cdd|35611 : 411.0) no description available & (gnl|cdd|30899 : 144.0) no description available & (q7g8y3|isw2_orysa : 96.7) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1018.0) & (original description: Putative chr31, Description = SNF2 family amino-terminal protein, PFAM = PF00271;PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00017381ctg012_7039-11930' '(at2g33610 : 336.0) Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Interacts with BSH, AtSWI3A, SWI3C and FCA. Expressed ubiquitously.; switch subunit 3 (SWI3B); FUNCTIONS IN: DNA binding; INVOLVED IN: chromatin remodeling; LOCATED IN: SWI/SNF complex, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SWIRM (InterPro:IPR007526), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: SWITCH/sucrose nonfermenting 3C (TAIR:AT1G21700.1); Has 1055 Blast hits to 780 proteins in 192 species: Archae - 0; Bacteria - 2; Metazoa - 438; Fungi - 310; Plants - 199; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|36493 : 221.0) no description available & (gnl|cdd|34856 : 170.0) no description available & (reliability: 672.0) & (original description: Putative SWI3B, Description = SWI/SNF complex subunit SWI3B, PFAM = PF04433;PF00249)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00023912ctg001_1749-4996' '(at1g21700 : 110.0) a member of the Arabidopsis SWI3 gene family. Protein physically interacts with ATSWI3B and ATSWI3A, the other two members of the SWI3 family. Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Referred to as CHB3 in Zhou et al (2003).; SWITCH/sucrose nonfermenting 3C (SWI3C); FUNCTIONS IN: DNA binding; INVOLVED IN: chromatin remodeling; LOCATED IN: SWI/SNF complex, chromatin remodeling complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SWIRM (InterPro:IPR007526), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: DNA-binding family protein (TAIR:AT4G34430.3); Has 4703 Blast hits to 3623 proteins in 273 species: Archae - 0; Bacteria - 43; Metazoa - 1892; Fungi - 779; Plants - 380; Viruses - 2; Other Eukaryotes - 1607 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative CHB4, Description = SWI/SNF complex subunit SWI3C, PFAM = )' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00026866ctg014_1-2836' '(at5g66750 : 173.0) Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1 shows some resistance to agrobacterium-mediated root transformation.; chromatin remodeling 1 (CHR1); FUNCTIONS IN: helicase activity, ATPase activity; INVOLVED IN: methylation-dependent chromatin silencing, DNA mediated transformation, transposition, RNA-mediated; LOCATED IN: nucleosome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35606 : 110.0) no description available & (reliability: 346.0) & (original description: Putative hells, Description = Lymphoid-specific helicase, PFAM = )' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00026866ctg015_221-7435' '(at5g66750 : 834.0) Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1 shows some resistance to agrobacterium-mediated root transformation.; chromatin remodeling 1 (CHR1); FUNCTIONS IN: helicase activity, ATPase activity; INVOLVED IN: methylation-dependent chromatin silencing, DNA mediated transformation, transposition, RNA-mediated; LOCATED IN: nucleosome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35606 : 562.0) no description available & (q7g8y3|isw2_orysa : 341.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|84584 : 301.0) no description available & (reliability: 1668.0) & (original description: Putative CHA1, Description = ATP-dependent DNA helicase DDM1, PFAM = PF00271;PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00027828ctg005_4790-12223' '(at2g16390 : 839.0) Putative chromatin remodeling protein, member of a plant-specific subfamily of SWI2/SNF2-like proteins. Mutations nearly eliminate non-CpG methylation at a target promoter but do not affect rDNA or centromere methylation. Cooperates with PolIVb to facilitate RNA-directed de novo methylation and silencing of homologous DNA. Endogenous targets include intergenic regions near retrotransposon LTRs or short RNA encoding sequences that might epigenetically regulate adjacent genes. May be used to establish a basal yet reversible level of silencing in euchromatin.; DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 1 (DRD1); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: DNA methylation, production of siRNA involved in RNA interference; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 34 (TAIR:AT2G21450.1); Has 13448 Blast hits to 11886 proteins in 1506 species: Archae - 91; Bacteria - 3564; Metazoa - 3285; Fungi - 3284; Plants - 1229; Viruses - 105; Other Eukaryotes - 1890 (source: NCBI BLink). & (gnl|cdd|35611 : 473.0) no description available & (gnl|cdd|30899 : 120.0) no description available & (q7g8y3|isw2_orysa : 80.1) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1678.0) & (original description: Putative CHR34, Description = Chromatin remodeling 34, PFAM = PF00176;PF00271)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00031054ctg003_405-6657' '(gnl|cdd|36220 : 377.0) no description available & (at1g05120 : 376.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G02670.1); Has 29218 Blast hits to 14448 proteins in 1607 species: Archae - 124; Bacteria - 8622; Metazoa - 6656; Fungi - 6694; Plants - 2674; Viruses - 189; Other Eukaryotes - 4259 (source: NCBI BLink). & (gnl|cdd|30899 : 142.0) no description available & (reliability: 752.0) & (original description: Putative rhp16, Description = DNA repair protein RAD16, PFAM = PF00097;PF00271)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00031397ctg007_1-6095' '(at3g17590 : 242.0) Encodes the Arabidopsis homologue of yeast SNF5 and represents a conserved subunit of plant SWI/SNF complexes.; BUSHY GROWTH (BSH); CONTAINS InterPro DOMAIN/s: SNF5/SMARCB1/INI1 (InterPro:IPR006939). & (gnl|cdd|36862 : 170.0) no description available & (gnl|cdd|68430 : 106.0) no description available & (reliability: 484.0) & (original description: Putative BSH, Description = Bushy growth protein, PFAM = PF04855;PF04855)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00031781ctg000_1-13026' '(at2g46020 : 1447.0) Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D.; BRAHMA (BRM); FUNCTIONS IN: helicase activity, transcription regulator activity, DNA binding, ATP binding; INVOLVED IN: ATP-dependent chromatin remodeling, organ boundary specification between lateral organs and the meristem, regulation of gene expression, epigenetic; LOCATED IN: cytosol, nucleus, chromatin remodeling complex; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Bromodomain (InterPro:IPR001487), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35607 : 679.0) no description available & (q7g8y3|isw2_orysa : 330.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|84584 : 313.0) no description available & (reliability: 2894.0) & (original description: Putative chr122, Description = Chromatin complex subunit A, PFAM = PF08880;PF00176;PF00271)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00032939ctg001_7255-35016' '(at2g40770 : 1376.0) zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, nucleic acid binding, ATP binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT1G61140.1); Has 20880 Blast hits to 12947 proteins in 1504 species: Archae - 88; Bacteria - 5732; Metazoa - 4955; Fungi - 5171; Plants - 2134; Viruses - 115; Other Eukaryotes - 2685 (source: NCBI BLink). & (gnl|cdd|35519 : 641.0) no description available & (gnl|cdd|84584 : 93.4) no description available & (reliability: 2752.0) & (original description: Putative At2g40770, Description = RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein, PFAM = PF00176;PF00097)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00059102ctg000_1-14964' '(at5g63950 : 791.0) chromatin remodeling 24 (CHR24); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 8 (TAIR:AT2G18760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35608 : 536.0) no description available & (gnl|cdd|30899 : 252.0) no description available & (q7g8y3|isw2_orysa : 208.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1582.0) & (original description: Putative PICH, Description = DNA excision repair protein ERCC-6-like, PFAM = PF00271;PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben044scf00059239ctg002_1-2050' '(at5g66750 : 121.0) Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1 shows some resistance to agrobacterium-mediated root transformation.; chromatin remodeling 1 (CHR1); FUNCTIONS IN: helicase activity, ATPase activity; INVOLVED IN: methylation-dependent chromatin silencing, DNA mediated transformation, transposition, RNA-mediated; LOCATED IN: nucleosome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative CHA1, Description = ATP-dependent DNA helicase DDM1, PFAM = PF13892)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf00293_407677-426773' '(at5g63950 : 992.0) chromatin remodeling 24 (CHR24); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 8 (TAIR:AT2G18760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35608 : 640.0) no description available & (gnl|cdd|30899 : 248.0) no description available & (q7g8y3|isw2_orysa : 206.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1984.0) & (original description: Putative CHR24, Description = Protein CHROMATIN REMODELING 24, PFAM = PF00271;PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf00811_558118-561149' '(at1g05120 : 217.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G02670.1); Has 29218 Blast hits to 14448 proteins in 1607 species: Archae - 124; Bacteria - 8622; Metazoa - 6656; Fungi - 6694; Plants - 2674; Viruses - 189; Other Eukaryotes - 4259 (source: NCBI BLink). & (gnl|cdd|36220 : 153.0) no description available & (reliability: 434.0) & (original description: Putative At1g02670, Description = Putative ovule protein, PFAM = PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf00988_357147-398942' '(at1g08060 : 377.0) MORPHEUS MOLECULE (MOM); INVOLVED IN: chromatin silencing; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: chromatin remodeling 4 (TAIR:AT5G44800.1); Has 8505 Blast hits to 7857 proteins in 726 species: Archae - 6; Bacteria - 999; Metazoa - 3217; Fungi - 2019; Plants - 785; Viruses - 95; Other Eukaryotes - 1384 (source: NCBI BLink). & (gnl|cdd|35605 : 238.0) no description available & (q7g8y3|isw2_orysa : 120.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|84584 : 86.5) no description available & (reliability: 754.0) & (original description: Putative Sb10g000300, Description = Putative helicase protein MOM1-like, PFAM = PF00385;PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf01745_528678-540202' '(at1g05490 : 511.0) chromatin remodeling 31 (chr31); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 40 (TAIR:AT3G24340.1); Has 38115 Blast hits to 26256 proteins in 2107 species: Archae - 207; Bacteria - 10267; Metazoa - 11226; Fungi - 5719; Plants - 1929; Viruses - 244; Other Eukaryotes - 8523 (source: NCBI BLink). & (gnl|cdd|35611 : 412.0) no description available & (gnl|cdd|30899 : 138.0) no description available & (q7g8y3|isw2_orysa : 97.1) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1022.0) & (original description: Putative CHR31, Description = SNF2 family amino-terminal protein, PFAM = PF00271;PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf01943_529728-549144' '(at4g22140 : 350.0) EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72854 : 148.0) no description available & (gnl|cdd|37097 : 125.0) no description available & (reliability: 700.0) & (original description: Putative EBS, Description = Chromatin remodeling protein EBS, PFAM = PF01426;PF00628)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf02145_305559-315499' '(at4g22140 : 349.0) EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72854 : 144.0) no description available & (gnl|cdd|37097 : 123.0) no description available & (reliability: 698.0) & (original description: Putative ebs, Description = BAH-PHD domain-containing protein, PFAM = PF01426;PF00628)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf02243_170132-173533' '(at2g18760 : 234.0) chromatin remodeling 8 (CHR8); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: DNA repair, response to gamma radiation; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 24 (TAIR:AT5G63950.1); Has 17230 Blast hits to 14463 proteins in 1653 species: Archae - 99; Bacteria - 4180; Metazoa - 3846; Fungi - 4219; Plants - 1677; Viruses - 118; Other Eukaryotes - 3091 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative CHR8, Description = DNA repair and recombination protein RAD26, PFAM = )' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf02300_23353-61283' '(at2g40770 : 1634.0) zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, nucleic acid binding, ATP binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT1G61140.1); Has 20880 Blast hits to 12947 proteins in 1504 species: Archae - 88; Bacteria - 5732; Metazoa - 4955; Fungi - 5171; Plants - 2134; Viruses - 115; Other Eukaryotes - 2685 (source: NCBI BLink). & (gnl|cdd|35519 : 791.0) no description available & (gnl|cdd|84584 : 93.4) no description available & (reliability: 3268.0) & (original description: Putative SHPRH, Description = E3 ubiquitin-protein ligase SHPRH, PFAM = PF00271;PF00176;PF00097)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf02344_700213-758342' '(at1g08600 : 1084.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (gnl|cdd|36233 : 1015.0) no description available & (gnl|cdd|84584 : 227.0) no description available & (q7g8y3|isw2_orysa : 173.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2168.0) & (original description: Putative ATRX, Description = Protein CHROMATIN REMODELING 20, PFAM = PF00271;PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf02344_700969-735680' '(at1g08600 : 927.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (gnl|cdd|36233 : 743.0) no description available & (gnl|cdd|30899 : 219.0) no description available & (q7g8y3|isw2_orysa : 166.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1854.0) & (original description: Putative atrx, Description = Transcriptional regulator ATRX, PFAM = PF00271;PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf02344_732595-747595' '(gnl|cdd|36233 : 254.0) no description available & (at1g08600 : 245.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (reliability: 490.0) & (original description: Putative ATRX, Description = Transcriptional regulator ATRX, PFAM = PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf02752_502737-521035' '(at3g06400 : 1652.0) Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature.; chromatin-remodeling protein 11 (CHR11); FUNCTIONS IN: in 7 functions; INVOLVED IN: cell growth, embryo sac development; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), SLIDE (InterPro:IPR015195), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2). & (q7g8y3|isw2_orysa : 1627.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35606 : 1094.0) no description available & (gnl|cdd|84584 : 334.0) no description available & (reliability: 3304.0) & (original description: Putative CHR17, Description = ISWI chromatin-remodeling complex ATPase CHR17, PFAM = PF00176;PF00271;PF09111;PF09110)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf02922_116725-142034' '(at5g07810 : 748.0) SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding, endonuclease activity; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), HNH endonuclease (InterPro:IPR002711), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor18 (TAIR:AT1G48310.1); Has 16904 Blast hits to 14939 proteins in 1977 species: Archae - 110; Bacteria - 5677; Metazoa - 3556; Fungi - 3371; Plants - 1315; Viruses - 123; Other Eukaryotes - 2752 (source: NCBI BLink). & (gnl|cdd|36218 : 507.0) no description available & (gnl|cdd|30899 : 161.0) no description available & (reliability: 1496.0) & (original description: Putative BnaC03g03250D, Description = BnaC03g03250D protein, PFAM = PF00271;PF00176;PF01844)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf02968_503051-512631' '(at4g22140 : 363.0) EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72854 : 152.0) no description available & (gnl|cdd|37097 : 125.0) no description available & (reliability: 726.0) & (original description: Putative EBS, Description = Chromatin remodeling protein EBS, PFAM = PF01426;PF00628)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf03080_237147-241585' '(at1g49520 : 221.0) SWIB complex BAF60b domain-containing protein; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121), SWIB domain (InterPro:IPR019835), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: SWIB complex BAF60b domain-containing protein (TAIR:AT3G19080.1); Has 3197 Blast hits to 1975 proteins in 305 species: Archae - 0; Bacteria - 439; Metazoa - 696; Fungi - 468; Plants - 732; Viruses - 19; Other Eukaryotes - 843 (source: NCBI BLink). & (gnl|cdd|37157 : 122.0) no description available & (gnl|cdd|35090 : 107.0) no description available & (reliability: 442.0) & (original description: Putative PGSC0003DMG400025800, Description = Upstream activation factor subunit spp27, PFAM = PF02201;PF02201;PF08766)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf03302_359517-381425' '(at1g08060 : 141.0) MORPHEUS MOLECULE (MOM); INVOLVED IN: chromatin silencing; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: chromatin remodeling 4 (TAIR:AT5G44800.1); Has 8505 Blast hits to 7857 proteins in 726 species: Archae - 6; Bacteria - 999; Metazoa - 3217; Fungi - 2019; Plants - 785; Viruses - 95; Other Eukaryotes - 1384 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative , Description = Putative helicase protein MOM1-like, PFAM = )' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf03424_61298-66939' '(at2g33610 : 339.0) Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Interacts with BSH, AtSWI3A, SWI3C and FCA. Expressed ubiquitously.; switch subunit 3 (SWI3B); FUNCTIONS IN: DNA binding; INVOLVED IN: chromatin remodeling; LOCATED IN: SWI/SNF complex, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SWIRM (InterPro:IPR007526), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: SWITCH/sucrose nonfermenting 3C (TAIR:AT1G21700.1); Has 1055 Blast hits to 780 proteins in 192 species: Archae - 0; Bacteria - 2; Metazoa - 438; Fungi - 310; Plants - 199; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|36493 : 219.0) no description available & (gnl|cdd|34856 : 169.0) no description available & (reliability: 678.0) & (original description: Putative SWI3B, Description = SWI/SNF complex subunit SWI3B, PFAM = PF00249;PF04433)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf03613_75571-84166' '(at4g22140 : 316.0) EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72854 : 139.0) no description available & (gnl|cdd|37097 : 126.0) no description available & (reliability: 632.0) & (original description: Putative SHL, Description = Chromatin remodeling protein SHL, PFAM = PF00628;PF01426)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf03710_1078228-1092727' '(at1g21700 : 626.0) a member of the Arabidopsis SWI3 gene family. Protein physically interacts with ATSWI3B and ATSWI3A, the other two members of the SWI3 family. Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Referred to as CHB3 in Zhou et al (2003).; SWITCH/sucrose nonfermenting 3C (SWI3C); FUNCTIONS IN: DNA binding; INVOLVED IN: chromatin remodeling; LOCATED IN: SWI/SNF complex, chromatin remodeling complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SWIRM (InterPro:IPR007526), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: DNA-binding family protein (TAIR:AT4G34430.3); Has 4703 Blast hits to 3623 proteins in 273 species: Archae - 0; Bacteria - 43; Metazoa - 1892; Fungi - 779; Plants - 380; Viruses - 2; Other Eukaryotes - 1607 (source: NCBI BLink). & (gnl|cdd|36493 : 293.0) no description available & (gnl|cdd|34856 : 166.0) no description available & (reliability: 1252.0) & (original description: Putative SWI3C, Description = SWI/SNF complex subunit SWI3C, PFAM = PF16495;PF00249;PF04433)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf04011_659824-680903' '(at1g05120 : 1061.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G02670.1); Has 29218 Blast hits to 14448 proteins in 1607 species: Archae - 124; Bacteria - 8622; Metazoa - 6656; Fungi - 6694; Plants - 2674; Viruses - 189; Other Eukaryotes - 4259 (source: NCBI BLink). & (gnl|cdd|36220 : 728.0) no description available & (gnl|cdd|30899 : 141.0) no description available & (q7g8y3|isw2_orysa : 92.4) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2122.0) & (original description: Putative rhp16, Description = DNA repair protein RAD16, PFAM = PF00271;PF13445;PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf04145_123867-137356' '(at5g66750 : 1021.0) Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1 shows some resistance to agrobacterium-mediated root transformation.; chromatin remodeling 1 (CHR1); FUNCTIONS IN: helicase activity, ATPase activity; INVOLVED IN: methylation-dependent chromatin silencing, DNA mediated transformation, transposition, RNA-mediated; LOCATED IN: nucleosome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35606 : 681.0) no description available & (q7g8y3|isw2_orysa : 410.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|84584 : 307.0) no description available & (reliability: 2042.0) & (original description: Putative DDM1, Description = ATP-dependent DNA helicase DDM1, PFAM = PF00176;PF00271)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf04544_79692-92084' '(at3g12810 : 1428.0) Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).; PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: SWI/SNF complex, cell wall, chromatin remodeling complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: HSA (InterPro:IPR006562), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), SNF2-related (InterPro:IPR000330), MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: INO80 ortholog (TAIR:AT3G57300.1); Has 42311 Blast hits to 26312 proteins in 2357 species: Archae - 246; Bacteria - 10217; Metazoa - 11172; Fungi - 7336; Plants - 2916; Viruses - 500; Other Eukaryotes - 9924 (source: NCBI BLink). & (gnl|cdd|35612 : 565.0) no description available & (gnl|cdd|84584 : 318.0) no description available & (q7g8y3|isw2_orysa : 268.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2856.0) & (original description: Putative swr1, Description = Helicase SWR1, PFAM = PF00176;PF07529;PF00271)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf04778_28446-37364' '(at4g34430 : 470.0) Member of a small family of SWI3-like genes in Arabidopsis. Referred to as CHB4 in Zhou et al. (2002).; CHB3; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SWIRM (InterPro:IPR007526), SANT, eukarya (InterPro:IPR017884), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: SWITCH/sucrose nonfermenting 3C (TAIR:AT1G21700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36493 : 174.0) no description available & (gnl|cdd|34856 : 166.0) no description available & (reliability: 940.0) & (original description: Putative SWI3D, Description = SWI/SNF complex subunit SWI3D, PFAM = PF00569;PF00249;PF04433;PF16495)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf04861_73520-85359' '(at2g16390 : 887.0) Putative chromatin remodeling protein, member of a plant-specific subfamily of SWI2/SNF2-like proteins. Mutations nearly eliminate non-CpG methylation at a target promoter but do not affect rDNA or centromere methylation. Cooperates with PolIVb to facilitate RNA-directed de novo methylation and silencing of homologous DNA. Endogenous targets include intergenic regions near retrotransposon LTRs or short RNA encoding sequences that might epigenetically regulate adjacent genes. May be used to establish a basal yet reversible level of silencing in euchromatin.; DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 1 (DRD1); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: DNA methylation, production of siRNA involved in RNA interference; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 34 (TAIR:AT2G21450.1); Has 13448 Blast hits to 11886 proteins in 1506 species: Archae - 91; Bacteria - 3564; Metazoa - 3285; Fungi - 3284; Plants - 1229; Viruses - 105; Other Eukaryotes - 1890 (source: NCBI BLink). & (gnl|cdd|35611 : 479.0) no description available & (gnl|cdd|30899 : 127.0) no description available & (reliability: 1774.0) & (original description: Putative DRD1, Description = Protein CHROMATIN REMODELING 35, PFAM = PF00176;PF00271)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf05610_42265-53816' '(at5g66750 : 991.0) Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1 shows some resistance to agrobacterium-mediated root transformation.; chromatin remodeling 1 (CHR1); FUNCTIONS IN: helicase activity, ATPase activity; INVOLVED IN: methylation-dependent chromatin silencing, DNA mediated transformation, transposition, RNA-mediated; LOCATED IN: nucleosome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35606 : 682.0) no description available & (q7g8y3|isw2_orysa : 428.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|84584 : 299.0) no description available & (reliability: 1982.0) & (original description: Putative CHA1, Description = Putative global transcription activator SNF2L1, PFAM = PF00176;PF00271)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf05750_465223-469127' '(at5g14170 : 523.0) CHC1 is predicted to encode a protein that belongs to the chromodomain remodeling complex. Two RNAi knock-down lines have a dwarf phenotype and reduced rates of Agrobacterium-mediated transformation. The low rate of root-mediated transformation rate may result from altered root morphology or reduced root growth rates.; CHC1; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121); BEST Arabidopsis thaliana protein match is: SWIB/MDM2 domain superfamily protein (TAIR:AT3G01890.1); Has 1254 Blast hits to 1169 proteins in 258 species: Archae - 0; Bacteria - 112; Metazoa - 460; Fungi - 424; Plants - 177; Viruses - 4; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|37781 : 390.0) no description available & (reliability: 1046.0) & (original description: Putative At5g14170, Description = SWI/SNF complex component SNF12 homolog, PFAM = PF02201)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf06151_285933-297352' '(at3g06010 : 1377.0) Encodes AtCHR12, a SNF2/Brahma-type chromatin-remodeling protein. AtCHR12 mediates temporary growth arrest in Arabidopsis upon perceiving environmental stress.; ATCHR12; FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: response to water deprivation, response to salt stress, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT5G19310.1); Has 23556 Blast hits to 19403 proteins in 2220 species: Archae - 141; Bacteria - 6122; Metazoa - 5759; Fungi - 4503; Plants - 1859; Viruses - 268; Other Eukaryotes - 4904 (source: NCBI BLink). & (gnl|cdd|35607 : 985.0) no description available & (q7g8y3|isw2_orysa : 452.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|84584 : 328.0) no description available & (reliability: 2754.0) & (original description: Putative CHR12, Description = Probable ATP-dependent DNA helicase CHR12, PFAM = PF00271;PF00176;PF14619)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf06378_281848-289698' '(at5g20420 : 1102.0) chromatin remodeling 42 (CHR42); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: shoot apex, embryo, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 38 (TAIR:AT3G42670.1); Has 13786 Blast hits to 12302 proteins in 1638 species: Archae - 85; Bacteria - 4157; Metazoa - 3202; Fungi - 3141; Plants - 1285; Viruses - 57; Other Eukaryotes - 1859 (source: NCBI BLink). & (gnl|cdd|35611 : 500.0) no description available & (gnl|cdd|30899 : 105.0) no description available & (reliability: 2204.0) & (original description: Putative CLSY2, Description = SNF2 domain-containing protein CLASSY 2, PFAM = PF00176;PF00271)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf06435_358014-376510' '(at2g44980 : 1078.0) SNF2 domain-containing protein / helicase domain-containing protein; FUNCTIONS IN: transcription regulator activity, helicase activity, DNA binding, nucleic acid binding, ATP binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2); Has 17488 Blast hits to 15031 proteins in 1958 species: Archae - 101; Bacteria - 5047; Metazoa - 3666; Fungi - 3968; Plants - 1607; Viruses - 135; Other Eukaryotes - 2964 (source: NCBI BLink). & (gnl|cdd|35606 : 677.0) no description available & (q7g8y3|isw2_orysa : 362.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|30899 : 277.0) no description available & (reliability: 2156.0) & (original description: Putative CHR10, Description = Probable helicase CHR10, PFAM = PF00176;PF00271)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf06588_208546-222972' '(at1g61140 : 919.0) embryo sac development arrest 16 (EDA16); FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; INVOLVED IN: embryo sac development; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT1G11100.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36219 : 496.0) no description available & (gnl|cdd|30899 : 136.0) no description available & (q7g8y3|isw2_orysa : 90.1) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1838.0) & (original description: Putative IDP2558, Description = Putative SNF2-domain/RING finger domain/helicase domain protein, PFAM = PF00176;PF00271;PF00097)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf07327_289421-302518' '(at2g46020 : 1446.0) Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D.; BRAHMA (BRM); FUNCTIONS IN: helicase activity, transcription regulator activity, DNA binding, ATP binding; INVOLVED IN: ATP-dependent chromatin remodeling, organ boundary specification between lateral organs and the meristem, regulation of gene expression, epigenetic; LOCATED IN: cytosol, nucleus, chromatin remodeling complex; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Bromodomain (InterPro:IPR001487), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35607 : 679.0) no description available & (q7g8y3|isw2_orysa : 330.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|84584 : 314.0) no description available & (reliability: 2892.0) & (original description: Putative brm, Description = ATP-dependent helicase BRM, PFAM = PF00176;PF00271;PF08880)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf07688_216632-236044' '(at1g08060 : 100.0) MORPHEUS MOLECULE (MOM); INVOLVED IN: chromatin silencing; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: chromatin remodeling 4 (TAIR:AT5G44800.1); Has 8505 Blast hits to 7857 proteins in 726 species: Archae - 6; Bacteria - 999; Metazoa - 3217; Fungi - 2019; Plants - 785; Viruses - 95; Other Eukaryotes - 1384 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative , Description = Putative helicase protein MOM1-like, PFAM = )' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf07817_123501-135045' '(at3g19080 : 226.0) SWIB complex BAF60b domain-containing protein; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121), SWIB domain (InterPro:IPR019835), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: SWIB complex BAF60b domain-containing protein (TAIR:AT1G49520.1); Has 4780 Blast hits to 2475 proteins in 346 species: Archae - 0; Bacteria - 702; Metazoa - 1207; Fungi - 636; Plants - 993; Viruses - 61; Other Eukaryotes - 1181 (source: NCBI BLink). & (gnl|cdd|37157 : 120.0) no description available & (gnl|cdd|47490 : 106.0) no description available & (reliability: 430.0) & (original description: Putative RCOM_0602170, Description = Upstream activation factor subunit UAF30, putative, PFAM = PF08766;PF02201;PF02201)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf08156_772686-825890' '(at3g54280 : 2512.0) ROOT GROWTH DEFECTIVE 3 (RGD3); FUNCTIONS IN: helicase activity, binding, DNA binding, nucleic acid binding, ATP binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), DEAD-like helicase, N-terminal (InterPro:IPR014001), Armadillo-type fold (InterPro:IPR016024), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1). & (gnl|cdd|35613 : 1534.0) no description available & (gnl|cdd|30899 : 316.0) no description available & (q7g8y3|isw2_orysa : 212.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 5024.0) & (original description: Putative BTAF1, Description = TATA-binding protein-associated factor BTAF1, PFAM = PF12054;PF00176;PF00271)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf08156_814769-818153' '(at3g54280 : 367.0) ROOT GROWTH DEFECTIVE 3 (RGD3); FUNCTIONS IN: helicase activity, binding, DNA binding, nucleic acid binding, ATP binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), DEAD-like helicase, N-terminal (InterPro:IPR014001), Armadillo-type fold (InterPro:IPR016024), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1). & (gnl|cdd|35613 : 193.0) no description available & (reliability: 734.0) & (original description: Putative Mot1, Description = TATA-binding protein-associated factor BTAF1, PFAM = PF12054)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf08667_56788-73533' '(at3g54460 : 1399.0) SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, nucleic acid binding, ATP binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), SNF2-related (InterPro:IPR000330), F-box domain, Skp2-like (InterPro:IPR022364), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 15028 Blast hits to 11196 proteins in 1367 species: Archae - 59; Bacteria - 4030; Metazoa - 3400; Fungi - 4173; Plants - 1458; Viruses - 121; Other Eukaryotes - 1787 (source: NCBI BLink). & (gnl|cdd|36219 : 118.0) no description available & (gnl|cdd|84584 : 90.0) no description available & (reliability: 2798.0) & (original description: Putative At3g54460, Description = F-box protein At3g54460, PFAM = PF00271;PF00176;PF00646;PF07496)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf08936_846131-853798' '(at2g47620 : 322.0) Homologous to yeast SWI3 and a member of the Arabidopsis SWI3 gene family. Protein physically interacts with ATSWI3B and ATSWI3C, the other two members of the SWI3 family.; SWITCH/sucrose nonfermenting 3A (SWI3A); FUNCTIONS IN: DNA binding; INVOLVED IN: chromatin remodeling; LOCATED IN: SWI/SNF complex; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SWIRM (InterPro:IPR007526), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: SWITCH/sucrose nonfermenting 3C (TAIR:AT1G21700.1); Has 887 Blast hits to 703 proteins in 193 species: Archae - 0; Bacteria - 3; Metazoa - 393; Fungi - 212; Plants - 178; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (gnl|cdd|36493 : 216.0) no description available & (gnl|cdd|34856 : 168.0) no description available & (reliability: 644.0) & (original description: Putative SWI3A, Description = SWI/SNF complex subunit SWI3A, PFAM = PF16495;PF00249;PF04433)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf09150_65892-80326' '(at3g06400 : 1535.0) Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature.; chromatin-remodeling protein 11 (CHR11); FUNCTIONS IN: in 7 functions; INVOLVED IN: cell growth, embryo sac development; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), SLIDE (InterPro:IPR015195), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2). & (q7g8y3|isw2_orysa : 1488.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35606 : 1007.0) no description available & (gnl|cdd|84584 : 339.0) no description available & (reliability: 3070.0) & (original description: Putative CHR11, Description = ISWI chromatin-remodeling complex ATPase CHR11, PFAM = PF00271;PF09111;PF09110;PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf09416_114019-125638' '(at5g22750 : 1479.0) DNA repair gene. gamma-radiation hypersensitive (RAD5) involved in stable transformation and T-DNA transfer; RAD5; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: embryo, sperm cell, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Helicase protein with RING/U-box domain (TAIR:AT5G43530.1); Has 27107 Blast hits to 18179 proteins in 1771 species: Archae - 108; Bacteria - 7266; Metazoa - 8140; Fungi - 5089; Plants - 2446; Viruses - 173; Other Eukaryotes - 3885 (source: NCBI BLink). & (gnl|cdd|36219 : 512.0) no description available & (gnl|cdd|84584 : 188.0) no description available & (q7g8y3|isw2_orysa : 103.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2958.0) & (original description: Putative At5g22750, Description = Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2, PFAM = PF00271;PF13920;PF00176;PF08797)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf10287_247990-255150' '(at4g22140 : 322.0) EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72854 : 144.0) no description available & (gnl|cdd|37097 : 112.0) no description available & (reliability: 644.0) & (original description: Putative ebs, Description = BAH-PHD domain-containing protein, PFAM = PF00628;PF01426;PF03732)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf10329_296077-318019' '(at1g50410 : 898.0) SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, nucleic acid binding, ATP binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT3G20010.1); Has 25748 Blast hits to 15874 proteins in 1868 species: Archae - 87; Bacteria - 8136; Metazoa - 6127; Fungi - 5385; Plants - 2378; Viruses - 150; Other Eukaryotes - 3485 (source: NCBI BLink). & (gnl|cdd|36219 : 419.0) no description available & (gnl|cdd|30899 : 131.0) no description available & (q7g8y3|isw2_orysa : 89.7) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1796.0) & (original description: Putative CHR28, Description = Helicase-like transcription factor CHR28, PFAM = PF00271;PF13920;PF00176;PF00176)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf11774_151797-160151' '(at5g05130 : 1004.0) DNA/RNA helicase protein; FUNCTIONS IN: in 6 functions; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36219 : 405.0) no description available & (gnl|cdd|30899 : 208.0) no description available & (q7g8y3|isw2_orysa : 98.2) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2008.0) & (original description: Putative hltf, Description = Helicase-like transcription factor, PFAM = PF08797;PF00176;PF00097;PF00271)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf12953_119198-129174' '(at3g17590 : 355.0) Encodes the Arabidopsis homologue of yeast SNF5 and represents a conserved subunit of plant SWI/SNF complexes.; BUSHY GROWTH (BSH); CONTAINS InterPro DOMAIN/s: SNF5/SMARCB1/INI1 (InterPro:IPR006939). & (gnl|cdd|36862 : 218.0) no description available & (gnl|cdd|68430 : 118.0) no description available & (reliability: 710.0) & (original description: Putative BSH, Description = Chromatin structure-remodeling complex protein BSH, PFAM = PF04855;PF04855)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf13057_13493-17895' '(at5g14170 : 660.0) CHC1 is predicted to encode a protein that belongs to the chromodomain remodeling complex. Two RNAi knock-down lines have a dwarf phenotype and reduced rates of Agrobacterium-mediated transformation. The low rate of root-mediated transformation rate may result from altered root morphology or reduced root growth rates.; CHC1; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121); BEST Arabidopsis thaliana protein match is: SWIB/MDM2 domain superfamily protein (TAIR:AT3G01890.1); Has 1254 Blast hits to 1169 proteins in 258 species: Archae - 0; Bacteria - 112; Metazoa - 460; Fungi - 424; Plants - 177; Viruses - 4; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|37781 : 442.0) no description available & (reliability: 1320.0) & (original description: Putative At5g14170, Description = SWI/SNF complex component SNF12 homolog, PFAM = PF02201)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf14374_89613-108449' '(at1g48310 : 855.0) chromatin remodeling factor18 (CHR18); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein (TAIR:AT5G07810.1); Has 16435 Blast hits to 14312 proteins in 1741 species: Archae - 101; Bacteria - 4551; Metazoa - 3441; Fungi - 3785; Plants - 1315; Viruses - 143; Other Eukaryotes - 3099 (source: NCBI BLink). & (gnl|cdd|36218 : 456.0) no description available & (gnl|cdd|30899 : 165.0) no description available & (q7g8y3|isw2_orysa : 114.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1710.0) & (original description: Putative zranb3, Description = Zranb3 protein, PFAM = PF00176;PF00271)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf14830_21434-51194' '(at3g12810 : 1902.0) Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).; PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: SWI/SNF complex, cell wall, chromatin remodeling complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: HSA (InterPro:IPR006562), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), SNF2-related (InterPro:IPR000330), MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: INO80 ortholog (TAIR:AT3G57300.1); Has 42311 Blast hits to 26312 proteins in 2357 species: Archae - 246; Bacteria - 10217; Metazoa - 11172; Fungi - 7336; Plants - 2916; Viruses - 500; Other Eukaryotes - 9924 (source: NCBI BLink). & (gnl|cdd|35612 : 575.0) no description available & (gnl|cdd|84584 : 321.0) no description available & (q7g8y3|isw2_orysa : 270.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 3804.0) & (original description: Putative PIE1, Description = DEAD/DEAH box helicase domain-containing protein PIE1, PFAM = PF00176;PF07529;PF00271)' T '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'niben101scf18660_1784-6951' '(at2g33610 : 226.0) Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Interacts with BSH, AtSWI3A, SWI3C and FCA. Expressed ubiquitously.; switch subunit 3 (SWI3B); FUNCTIONS IN: DNA binding; INVOLVED IN: chromatin remodeling; LOCATED IN: SWI/SNF complex, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SWIRM (InterPro:IPR007526), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: SWITCH/sucrose nonfermenting 3C (TAIR:AT1G21700.1); Has 1055 Blast hits to 780 proteins in 192 species: Archae - 0; Bacteria - 2; Metazoa - 438; Fungi - 310; Plants - 199; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|36493 : 110.0) no description available & (gnl|cdd|34856 : 96.7) no description available & (reliability: 452.0) & (original description: Putative CHB2, Description = SWI/SNF complex subunit SWI3B, PFAM = PF00249)' T '27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'nbv0.3scaffold28250_1-16271' '(at4g19020 : 911.0) chromomethylase 2 (CMT2); FUNCTIONS IN: chromatin binding, DNA binding; INVOLVED IN: chromatin assembly or disassembly, DNA methylation; LOCATED IN: chromatin, nucleus; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525), Chromo domain-like (InterPro:IPR016197), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: chromomethylase 3 (TAIR:AT1G69770.1); Has 5135 Blast hits to 4403 proteins in 1000 species: Archae - 207; Bacteria - 2602; Metazoa - 790; Fungi - 215; Plants - 463; Viruses - 25; Other Eukaryotes - 833 (source: NCBI BLink). & (q9axt8|cmt1_maize : 692.0) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (Zea methyltransferase2) (Zmet2) (DNA cytosine methyltransferase MET2a) - Zea mays (Maize) & (gnl|cdd|72856 : 144.0) no description available & (reliability: 1822.0) & (original description: Putative CMT2, Description = Chromomethylase 2, PFAM = PF00385;PF00145;PF01426)' T '27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'nbv0.3scaffold53229_1938-7713' '(at5g25480 : 378.0) Encodes a DNA methyltransferase homolog. Human Dnmt2 methylates tRNA-Asp and can methylate Arabidopsis tRNA-Asp in vitro.; DNA methyltransferase-2 (DNMT2); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36137 : 216.0) no description available & (gnl|cdd|73191 : 159.0) no description available & (reliability: 756.0) & (original description: Putative met4, Description = DNA methyltransferase ZMET4, PFAM = PF00145)' T '27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'nbv0.5scaffold822_382455-389942' '(at5g14620 : 580.0) A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues.; domains rearranged methyltransferase 2 (DRM2); FUNCTIONS IN: N-methyltransferase activity; INVOLVED IN: DNA methylation, histone H3-K9 methylation; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), DNA methylase, C-5 cytosine-specific (InterPro:IPR001525); BEST Arabidopsis thaliana protein match is: domains rearranged methylase 1 (TAIR:AT5G15380.1); Has 741 Blast hits to 627 proteins in 144 species: Archae - 0; Bacteria - 170; Metazoa - 285; Fungi - 0; Plants - 156; Viruses - 13; Other Eukaryotes - 117 (source: NCBI BLink). & (reliability: 1160.0) & (original description: Putative drm, Description = Domains rearranged methyltransferase, PFAM = PF00145)' T '27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'nbv0.5scaffold2670_61300-67159' '(at5g14620 : 597.0) A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues.; domains rearranged methyltransferase 2 (DRM2); FUNCTIONS IN: N-methyltransferase activity; INVOLVED IN: DNA methylation, histone H3-K9 methylation; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), DNA methylase, C-5 cytosine-specific (InterPro:IPR001525); BEST Arabidopsis thaliana protein match is: domains rearranged methylase 1 (TAIR:AT5G15380.1); Has 741 Blast hits to 627 proteins in 144 species: Archae - 0; Bacteria - 170; Metazoa - 285; Fungi - 0; Plants - 156; Viruses - 13; Other Eukaryotes - 117 (source: NCBI BLink). & (reliability: 1194.0) & (original description: Putative DRM2, Description = DNA (cytosine-5)-methyltransferase DRM2, PFAM = PF00145)' T '27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'nbv0.5scaffold7069_1-43850' '(at5g15380 : 263.0) Encodes methyltransferase involved in the de novo DNA methylation and maintenance of asymmetric methylation of DNA sequences.; domains rearranged methylase 1 (DRM1); CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), DNA methylase, C-5 cytosine-specific (InterPro:IPR001525); BEST Arabidopsis thaliana protein match is: domains rearranged methyltransferase 2 (TAIR:AT5G14620.1); Has 662 Blast hits to 554 proteins in 116 species: Archae - 0; Bacteria - 110; Metazoa - 281; Fungi - 2; Plants - 156; Viruses - 12; Other Eukaryotes - 101 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative DRM1, Description = DNA (Cytosine-5)-methyltransferase DRM2, PFAM = )' T '27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben044scf00005591ctg008_9746-17269' '(at5g25480 : 465.0) Encodes a DNA methyltransferase homolog. Human Dnmt2 methylates tRNA-Asp and can methylate Arabidopsis tRNA-Asp in vitro.; DNA methyltransferase-2 (DNMT2); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36137 : 278.0) no description available & (gnl|cdd|73191 : 160.0) no description available & (reliability: 930.0) & (original description: Putative met4, Description = DNA methyltransferase ZMET4, PFAM = PF00145)' T '27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben044scf00005591ctg008_10970-17266' '(at5g25480 : 372.0) Encodes a DNA methyltransferase homolog. Human Dnmt2 methylates tRNA-Asp and can methylate Arabidopsis tRNA-Asp in vitro.; DNA methyltransferase-2 (DNMT2); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36137 : 221.0) no description available & (gnl|cdd|73191 : 160.0) no description available & (reliability: 744.0) & (original description: Putative met4, Description = DNA methyltransferase ZMET4, PFAM = PF00145)' T '27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben044scf00006473ctg000_3067-8115' '(at5g15380 : 568.0) Encodes methyltransferase involved in the de novo DNA methylation and maintenance of asymmetric methylation of DNA sequences.; domains rearranged methylase 1 (DRM1); CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), DNA methylase, C-5 cytosine-specific (InterPro:IPR001525); BEST Arabidopsis thaliana protein match is: domains rearranged methyltransferase 2 (TAIR:AT5G14620.1); Has 662 Blast hits to 554 proteins in 116 species: Archae - 0; Bacteria - 110; Metazoa - 281; Fungi - 2; Plants - 156; Viruses - 12; Other Eukaryotes - 101 (source: NCBI BLink). & (reliability: 1136.0) & (original description: Putative DRM2, Description = DRM2, PFAM = PF00145)' T '27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben044scf00013554ctg009_11426-19385' '(at3g17310 : 437.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; BEST Arabidopsis thaliana protein match is: domains rearranged methyltransferase 2 (TAIR:AT5G14620.1); Has 164 Blast hits to 118 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 162; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 874.0) & (original description: Putative DRM2a, Description = Domain rearranged methyltransferase, PFAM = )' T '27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben044scf00029845ctg003_1-8170' '(q9axt8|cmt1_maize : 799.0) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (Zea methyltransferase2) (Zmet2) (DNA cytosine methyltransferase MET2a) - Zea mays (Maize) & (at1g69770 : 788.0) Encodes a chromomethylase involved in methylating cytosine residues at non-CG sites. Involved in preferentially methylating transposon-related sequences, reducing their mobility. CMT3 interacts with an Arabidopsis homologue of HP1 (heterochromatin protein 1), which in turn interacts with methylated histones. Involved in gene silencing.; chromomethylase 3 (CMT3); FUNCTIONS IN: DNA (cytosine-5-)-methyltransferase activity; INVOLVED IN: in 6 processes; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525), Chromo domain-like (InterPro:IPR016197), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), DNA methylase, C-5 cytosine-specific, active site (InterPro:IPR018117), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: chromomethylase 2 (TAIR:AT4G19020.1); Has 4337 Blast hits to 3739 proteins in 974 species: Archae - 208; Bacteria - 2545; Metazoa - 230; Fungi - 161; Plants - 416; Viruses - 30; Other Eukaryotes - 747 (source: NCBI BLink). & (gnl|cdd|72856 : 195.0) no description available & (reliability: 1576.0) & (original description: Putative cmt3, Description = Chromomethylase, PFAM = PF01426;PF00385;PF00145)' T '27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben044scf00030400ctg000_1-16650' '(at4g19020 : 907.0) chromomethylase 2 (CMT2); FUNCTIONS IN: chromatin binding, DNA binding; INVOLVED IN: chromatin assembly or disassembly, DNA methylation; LOCATED IN: chromatin, nucleus; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525), Chromo domain-like (InterPro:IPR016197), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: chromomethylase 3 (TAIR:AT1G69770.1); Has 5135 Blast hits to 4403 proteins in 1000 species: Archae - 207; Bacteria - 2602; Metazoa - 790; Fungi - 215; Plants - 463; Viruses - 25; Other Eukaryotes - 833 (source: NCBI BLink). & (q9axt8|cmt1_maize : 691.0) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (Zea methyltransferase2) (Zmet2) (DNA cytosine methyltransferase MET2a) - Zea mays (Maize) & (gnl|cdd|72856 : 144.0) no description available & (reliability: 1814.0) & (original description: Putative CMT2, Description = Chromomethylase 2, PFAM = PF00145;PF01426;PF00385)' T '27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben044scf00030400ctg000_5282-16843' '(at4g19020 : 580.0) chromomethylase 2 (CMT2); FUNCTIONS IN: chromatin binding, DNA binding; INVOLVED IN: chromatin assembly or disassembly, DNA methylation; LOCATED IN: chromatin, nucleus; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525), Chromo domain-like (InterPro:IPR016197), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: chromomethylase 3 (TAIR:AT1G69770.1); Has 5135 Blast hits to 4403 proteins in 1000 species: Archae - 207; Bacteria - 2602; Metazoa - 790; Fungi - 215; Plants - 463; Viruses - 25; Other Eukaryotes - 833 (source: NCBI BLink). & (q9axt8|cmt1_maize : 465.0) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (Zea methyltransferase2) (Zmet2) (DNA cytosine methyltransferase MET2a) - Zea mays (Maize) & (gnl|cdd|84558 : 81.5) no description available & (reliability: 1160.0) & (original description: Putative cmt3b, Description = Chromomethylase, PFAM = PF00145)' T '27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben101scf01145_346288-364260' '(at4g19020 : 902.0) chromomethylase 2 (CMT2); FUNCTIONS IN: chromatin binding, DNA binding; INVOLVED IN: chromatin assembly or disassembly, DNA methylation; LOCATED IN: chromatin, nucleus; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525), Chromo domain-like (InterPro:IPR016197), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: chromomethylase 3 (TAIR:AT1G69770.1); Has 5135 Blast hits to 4403 proteins in 1000 species: Archae - 207; Bacteria - 2602; Metazoa - 790; Fungi - 215; Plants - 463; Viruses - 25; Other Eukaryotes - 833 (source: NCBI BLink). & (q9axt8|cmt1_maize : 693.0) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (Zea methyltransferase2) (Zmet2) (DNA cytosine methyltransferase MET2a) - Zea mays (Maize) & (gnl|cdd|72856 : 143.0) no description available & (reliability: 1804.0) & (original description: Putative MET2A, Description = DNA (cytosine-5)-methyltransferase 1, PFAM = PF00145;PF01426;PF00385)' T '27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben101scf01396_821809-829771' '(at5g25480 : 474.0) Encodes a DNA methyltransferase homolog. Human Dnmt2 methylates tRNA-Asp and can methylate Arabidopsis tRNA-Asp in vitro.; DNA methyltransferase-2 (DNMT2); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36137 : 278.0) no description available & (gnl|cdd|73191 : 159.0) no description available & (reliability: 948.0) & (original description: Putative met4, Description = DNA methyltransferase ZMET4, PFAM = PF00145)' T '27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben101scf01396_821812-828317' '(at5g25480 : 379.0) Encodes a DNA methyltransferase homolog. Human Dnmt2 methylates tRNA-Asp and can methylate Arabidopsis tRNA-Asp in vitro.; DNA methyltransferase-2 (DNMT2); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36137 : 219.0) no description available & (gnl|cdd|73191 : 160.0) no description available & (reliability: 758.0) & (original description: Putative met4, Description = DNA methyltransferase ZMET4, PFAM = PF00145)' T '27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben101scf01671_255426-263989' '(at3g17310 : 434.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; BEST Arabidopsis thaliana protein match is: domains rearranged methyltransferase 2 (TAIR:AT5G14620.1); Has 164 Blast hits to 118 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 162; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 868.0) & (original description: Putative DRM2, Description = Cytosine-5-methyltransferase, PFAM = )' T '27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben101scf02072_115776-128921' '(q8lpu5|cmt3_maize : 809.0) DNA (cytosine-5)-methyltransferase 3 (EC 2.1.1.37) (Chromomethylase 3) (DNA methyltransferase 105) - Zea mays (Maize) & (at1g69770 : 780.0) Encodes a chromomethylase involved in methylating cytosine residues at non-CG sites. Involved in preferentially methylating transposon-related sequences, reducing their mobility. CMT3 interacts with an Arabidopsis homologue of HP1 (heterochromatin protein 1), which in turn interacts with methylated histones. Involved in gene silencing.; chromomethylase 3 (CMT3); FUNCTIONS IN: DNA (cytosine-5-)-methyltransferase activity; INVOLVED IN: in 6 processes; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525), Chromo domain-like (InterPro:IPR016197), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), DNA methylase, C-5 cytosine-specific, active site (InterPro:IPR018117), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: chromomethylase 2 (TAIR:AT4G19020.1); Has 4337 Blast hits to 3739 proteins in 974 species: Archae - 208; Bacteria - 2545; Metazoa - 230; Fungi - 161; Plants - 416; Viruses - 30; Other Eukaryotes - 747 (source: NCBI BLink). & (gnl|cdd|72856 : 182.0) no description available & (reliability: 1560.0) & (original description: Putative CMT3, Description = DNA (cytosine-5)-methyltransferase CMT3, PFAM = PF00385;PF01426;PF00145)' T '27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben101scf02361_522924-529444' '(at5g14620 : 587.0) A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues.; domains rearranged methyltransferase 2 (DRM2); FUNCTIONS IN: N-methyltransferase activity; INVOLVED IN: DNA methylation, histone H3-K9 methylation; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), DNA methylase, C-5 cytosine-specific (InterPro:IPR001525); BEST Arabidopsis thaliana protein match is: domains rearranged methylase 1 (TAIR:AT5G15380.1); Has 741 Blast hits to 627 proteins in 144 species: Archae - 0; Bacteria - 170; Metazoa - 285; Fungi - 0; Plants - 156; Viruses - 13; Other Eukaryotes - 117 (source: NCBI BLink). & (reliability: 1174.0) & (original description: Putative DRM2, Description = DNA (cytosine-5)-methyltransferase DRM2, PFAM = PF00145)' T '27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben101scf02944_184474-190045' '(at5g25480 : 370.0) Encodes a DNA methyltransferase homolog. Human Dnmt2 methylates tRNA-Asp and can methylate Arabidopsis tRNA-Asp in vitro.; DNA methyltransferase-2 (DNMT2); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36137 : 217.0) no description available & (gnl|cdd|73191 : 160.0) no description available & (reliability: 740.0) & (original description: Putative met4, Description = tRNA (Cytosine-5-)-methyltransferase, PFAM = PF00145)' T '27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben101scf07140_55930-67591' '(at5g14620 : 567.0) A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues.; domains rearranged methyltransferase 2 (DRM2); FUNCTIONS IN: N-methyltransferase activity; INVOLVED IN: DNA methylation, histone H3-K9 methylation; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), DNA methylase, C-5 cytosine-specific (InterPro:IPR001525); BEST Arabidopsis thaliana protein match is: domains rearranged methylase 1 (TAIR:AT5G15380.1); Has 741 Blast hits to 627 proteins in 144 species: Archae - 0; Bacteria - 170; Metazoa - 285; Fungi - 0; Plants - 156; Viruses - 13; Other Eukaryotes - 117 (source: NCBI BLink). & (reliability: 1134.0) & (original description: Putative DRM1, Description = DNA (cytosine-5)-methyltransferase DRM1, PFAM = PF00145)' T '27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben101scf07518_61891-92864' '(at5g15380 : 541.0) Encodes methyltransferase involved in the de novo DNA methylation and maintenance of asymmetric methylation of DNA sequences.; domains rearranged methylase 1 (DRM1); CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), DNA methylase, C-5 cytosine-specific (InterPro:IPR001525); BEST Arabidopsis thaliana protein match is: domains rearranged methyltransferase 2 (TAIR:AT5G14620.1); Has 662 Blast hits to 554 proteins in 116 species: Archae - 0; Bacteria - 110; Metazoa - 281; Fungi - 2; Plants - 156; Viruses - 12; Other Eukaryotes - 101 (source: NCBI BLink). & (reliability: 1082.0) & (original description: Putative DRM1, Description = DNA (cytosine-5)-methyltransferase DRM1, PFAM = PF00145)' T '27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben101scf32212_74001-87697' '(at5g49160 : 1755.0) Encodes a cytosine methyltransferase MET1. Required for silencing of FWA paternal allele in endosperm. Two lines with RNAi constructs directed against DMT1 have reduced agrobacterium-mediated tumor formation.; methyltransferase 1 (MET1); FUNCTIONS IN: methyltransferase activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA (cytosine-5)-methyltransferase 1 (InterPro:IPR017198), DNA methylase, C-5 cytosine-specific (InterPro:IPR001525), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), DNA methylase, C-5 cytosine-specific, active site (InterPro:IPR018117); BEST Arabidopsis thaliana protein match is: DNA (cytosine-5-)-methyltransferase family protein (TAIR:AT4G08990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|72848 : 273.0) no description available & (q9axt8|cmt1_maize : 203.0) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (Zea methyltransferase2) (Zmet2) (DNA cytosine methyltransferase MET2a) - Zea mays (Maize) & (reliability: 3510.0) & (original description: Putative met1, Description = Cytosine-specific methyltransferase, PFAM = PF12047;PF12047;PF01426;PF01426;PF00145)' T '27.3.46' 'RNA.regulation of transcription.DNA methyltransferases' 'niben101scf39449_18372-27366' '(q9axt8|cmt1_maize : 791.0) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (Zea methyltransferase2) (Zmet2) (DNA cytosine methyltransferase MET2a) - Zea mays (Maize) & (at4g19020 : 756.0) chromomethylase 2 (CMT2); FUNCTIONS IN: chromatin binding, DNA binding; INVOLVED IN: chromatin assembly or disassembly, DNA methylation; LOCATED IN: chromatin, nucleus; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525), Chromo domain-like (InterPro:IPR016197), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: chromomethylase 3 (TAIR:AT1G69770.1); Has 5135 Blast hits to 4403 proteins in 1000 species: Archae - 207; Bacteria - 2602; Metazoa - 790; Fungi - 215; Plants - 463; Viruses - 25; Other Eukaryotes - 833 (source: NCBI BLink). & (gnl|cdd|72856 : 196.0) no description available & (reliability: 1512.0) & (original description: Putative cmt3, Description = Chromomethylase, PFAM = PF00385;PF00145;PF01426)' T '27.3.47' 'RNA.regulation of transcription.ELF3' 'nbv0.3scaffold40860_8003-15193' '(at2g25930 : 201.0) Encodes a novel nuclear protein that is expressed rhythmically and interacts with phytochrome B to control plant development and flowering through a signal transduction pathway. Required component of the core circadian clock regardless of light conditions.; EARLY FLOWERING 3 (ELF3); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G21320.1); Has 3878 Blast hits to 3344 proteins in 292 species: Archae - 0; Bacteria - 125; Metazoa - 1474; Fungi - 865; Plants - 343; Viruses - 16; Other Eukaryotes - 1055 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative ELF3, Description = Nematode-responsive protein, PFAM = )' T '27.3.47' 'RNA.regulation of transcription.ELF3' 'niben101scf04675_196599-204354' '(at2g25930 : 197.0) Encodes a novel nuclear protein that is expressed rhythmically and interacts with phytochrome B to control plant development and flowering through a signal transduction pathway. Required component of the core circadian clock regardless of light conditions.; EARLY FLOWERING 3 (ELF3); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G21320.1); Has 3878 Blast hits to 3344 proteins in 292 species: Archae - 0; Bacteria - 125; Metazoa - 1474; Fungi - 865; Plants - 343; Viruses - 16; Other Eukaryotes - 1055 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative ELF3, Description = Nematode-responsive protein, PFAM = )' T '27.3.47' 'RNA.regulation of transcription.ELF3' 'niben101scf05272_11840-18343' '(at2g25930 : 141.0) Encodes a novel nuclear protein that is expressed rhythmically and interacts with phytochrome B to control plant development and flowering through a signal transduction pathway. Required component of the core circadian clock regardless of light conditions.; EARLY FLOWERING 3 (ELF3); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G21320.1); Has 3878 Blast hits to 3344 proteins in 292 species: Archae - 0; Bacteria - 125; Metazoa - 1474; Fungi - 865; Plants - 343; Viruses - 16; Other Eukaryotes - 1055 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative)' T '27.3.47' 'RNA.regulation of transcription.ELF3' 'niben101scf05923_377917-382938' '(at2g25930 : 138.0) Encodes a novel nuclear protein that is expressed rhythmically and interacts with phytochrome B to control plant development and flowering through a signal transduction pathway. Required component of the core circadian clock regardless of light conditions.; EARLY FLOWERING 3 (ELF3); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G21320.1); Has 3878 Blast hits to 3344 proteins in 292 species: Archae - 0; Bacteria - 125; Metazoa - 1474; Fungi - 865; Plants - 343; Viruses - 16; Other Eukaryotes - 1055 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative glysoja_023390, Description = Protein FAR1-RELATED SEQUENCE 11, PFAM = )' T '27.3.47' 'RNA.regulation of transcription.ELF3' 'niben101scf09513_156019-163219' '(at2g25930 : 247.0) Encodes a novel nuclear protein that is expressed rhythmically and interacts with phytochrome B to control plant development and flowering through a signal transduction pathway. Required component of the core circadian clock regardless of light conditions.; EARLY FLOWERING 3 (ELF3); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G21320.1); Has 3878 Blast hits to 3344 proteins in 292 species: Archae - 0; Bacteria - 125; Metazoa - 1474; Fungi - 865; Plants - 343; Viruses - 16; Other Eukaryotes - 1055 (source: NCBI BLink). & (reliability: 494.0) & (original description: Putative TCM_037249, Description = Hydroxyproline-rich glycoprotein family protein, putative, PFAM = )' T '27.3.48' 'RNA.regulation of transcription.FHA transcription factor' 'nbv0.3scaffold4603_50538-59075' '(at3g07220 : 238.0) SMAD/FHA domain-containing protein ; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: SMAD/FHA domain-containing protein (TAIR:AT3G07260.1); Has 459 Blast hits to 458 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 202; Plants - 94; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (reliability: 476.0) & (original description: Putative FHA2, Description = FHA domain-containing protein FHA2, PFAM = PF00498)' T '27.3.48' 'RNA.regulation of transcription.FHA transcription factor' 'nbv0.3scaffold41301_1-7551' '(at3g07220 : 409.0) SMAD/FHA domain-containing protein ; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: SMAD/FHA domain-containing protein (TAIR:AT3G07260.1); Has 459 Blast hits to 458 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 202; Plants - 94; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (reliability: 818.0) & (original description: Putative FHA1, Description = Transcriptional activator FHA1, PFAM = PF00498)' T '27.3.48' 'RNA.regulation of transcription.FHA transcription factor' 'nbv0.3scaffold65869_136-9132' '(at2g45460 : 520.0) SMAD/FHA domain-containing protein ; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253). & (reliability: 1040.0) & (original description: Putative FHA9, Description = BnaC04g04220D protein, PFAM = PF00498)' T '27.3.48' 'RNA.regulation of transcription.FHA transcription factor' 'nbv0.5scaffold467_71201-81460' '(at2g45460 : 586.0) SMAD/FHA domain-containing protein ; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253). & (reliability: 1172.0) & (original description: Putative FHA9, Description = FHA transcription factor, PFAM = PF00498)' T '27.3.48' 'RNA.regulation of transcription.FHA transcription factor' 'nbv0.5scaffold1635_382137-388230' '(at1g34355 : 259.0) Encodes PS1 (Parallel Spindle 1). Mutations in PS1 lead to diploid male spores, diploid pollen grains, and spontaneous triploid plants in the next generation. Female meiosis is not affected in the mutants.; PARALLEL SPINDLE 1 (PS1); CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Nucleotide binding protein, PINc (InterPro:IPR006596), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34110.1); Has 3416 Blast hits to 2816 proteins in 576 species: Archae - 6; Bacteria - 1040; Metazoa - 1174; Fungi - 342; Plants - 221; Viruses - 2; Other Eukaryotes - 631 (source: NCBI BLink). & (reliability: 518.0) & (original description: Putative PS1, Description = FHA domain-containing protein PS1, PFAM = PF13638;PF00498)' T '27.3.48' 'RNA.regulation of transcription.FHA transcription factor' 'niben044scf00002060ctg006_990-7091' '(at3g07260 : 232.0) SMAD/FHA domain-containing protein ; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: SMAD/FHA domain-containing protein (TAIR:AT3G07220.1); Has 417 Blast hits to 417 proteins in 140 species: Archae - 0; Bacteria - 2; Metazoa - 118; Fungi - 198; Plants - 82; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 464.0) & (original description: Putative FHA2, Description = FHA domain-containing protein FHA2, PFAM = PF00498)' T '27.3.48' 'RNA.regulation of transcription.FHA transcription factor' 'niben044scf00002839ctg008_1-5525' '(at1g34355 : 253.0) Encodes PS1 (Parallel Spindle 1). Mutations in PS1 lead to diploid male spores, diploid pollen grains, and spontaneous triploid plants in the next generation. Female meiosis is not affected in the mutants.; PARALLEL SPINDLE 1 (PS1); CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Nucleotide binding protein, PINc (InterPro:IPR006596), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34110.1); Has 3416 Blast hits to 2816 proteins in 576 species: Archae - 6; Bacteria - 1040; Metazoa - 1174; Fungi - 342; Plants - 221; Viruses - 2; Other Eukaryotes - 631 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative PS1, Description = FHA domain-containing protein PS1, PFAM = PF00498;PF13638)' T '27.3.48' 'RNA.regulation of transcription.FHA transcription factor' 'niben101scf02423_219365-222413' '(at1g34355 : 105.0) Encodes PS1 (Parallel Spindle 1). Mutations in PS1 lead to diploid male spores, diploid pollen grains, and spontaneous triploid plants in the next generation. Female meiosis is not affected in the mutants.; PARALLEL SPINDLE 1 (PS1); CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Nucleotide binding protein, PINc (InterPro:IPR006596), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34110.1); Has 3416 Blast hits to 2816 proteins in 576 species: Archae - 6; Bacteria - 1040; Metazoa - 1174; Fungi - 342; Plants - 221; Viruses - 2; Other Eukaryotes - 631 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative PS1, Description = Nuclear inhibitor of protein phosphatase 1, PFAM = PF00498)' T '27.3.48' 'RNA.regulation of transcription.FHA transcription factor' 'niben101scf03479_409052-420898' '(at3g07220 : 241.0) SMAD/FHA domain-containing protein ; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: SMAD/FHA domain-containing protein (TAIR:AT3G07260.1); Has 459 Blast hits to 458 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 202; Plants - 94; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative FHA2, Description = FHA domain-containing protein FHA2, PFAM = PF00498)' T '27.3.48' 'RNA.regulation of transcription.FHA transcription factor' 'niben101scf04813_87273-103046' '(at2g45460 : 621.0) SMAD/FHA domain-containing protein ; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253). & (reliability: 1242.0) & (original description: Putative FHA9, Description = FHA transcription factor, PFAM = PF00498)' T '27.3.48' 'RNA.regulation of transcription.FHA transcription factor' 'niben101scf06423_451078-455606' '(at5g47790 : 420.0) SMAD/FHA domain-containing protein ; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: SMAD/FHA domain-containing protein (TAIR:AT5G38840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37091 : 244.0) no description available & (gnl|cdd|28942 : 81.6) no description available & (reliability: 840.0) & (original description: Putative glysoja_015141, Description = Nuclear inhibitor of protein phosphatase 1, PFAM = PF00498)' T '27.3.48' 'RNA.regulation of transcription.FHA transcription factor' 'niben101scf07623_76502-101179' '(at5g07400 : 855.0) forkhead-associated domain-containing protein / FHA domain-containing protein; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, phosphoric diester hydrolase activity, zinc ion binding, nucleic acid binding; INVOLVED IN: DNA repair; LOCATED IN: nucleus; EXPRESSED IN: sperm cell, seed; EXPRESSED DURING: F mature embryo stage; CONTAINS InterPro DOMAIN/s: Tyrosyl-DNA phosphodiesterase (InterPro:IPR010347), SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253), HIP116, Rad5p N-terminal (InterPro:IPR014905); BEST Arabidopsis thaliana protein match is: tyrosyl-DNA phosphodiesterase-related (TAIR:AT5G15170.1); Has 394 Blast hits to 361 proteins in 119 species: Archae - 0; Bacteria - 2; Metazoa - 165; Fungi - 89; Plants - 76; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 1710.0) & (original description: Putative BnaC02g01640D, Description = BnaC02g01640D protein, PFAM = PF06087;PF06087;PF08797;PF00498)' T '27.3.48' 'RNA.regulation of transcription.FHA transcription factor' 'niben101scf08899_23589-31666' '(at3g07220 : 397.0) SMAD/FHA domain-containing protein ; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: SMAD/FHA domain-containing protein (TAIR:AT3G07260.1); Has 459 Blast hits to 458 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 202; Plants - 94; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (reliability: 794.0) & (original description: Putative FHA2, Description = FHA domain-containing protein FHA2, PFAM = PF00498)' T '27.3.49' 'RNA.regulation of transcription.GeBP like' 'nbv0.5scaffold2396_44671-48564' '(at5g28040 : 223.0) DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT3G04930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68089 : 133.0) no description available & (reliability: 446.0) & (original description: Putative cal, Description = Calmodulin, PFAM = PF04504)' T '27.3.49' 'RNA.regulation of transcription.GeBP like' 'nbv0.5scaffold4581_147950-158546' '(at5g28040 : 220.0) DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT3G04930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68089 : 133.0) no description available & (reliability: 440.0) & (original description: Putative PGSC0003DMG400022471, Description = DNA-binding storekeeper protein-related transcriptional regulator, PFAM = PF04504)' T '27.3.49' 'RNA.regulation of transcription.GeBP like' 'niben044scf00000733ctg002_4539-7837' '(at5g28040 : 216.0) DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT3G04930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68089 : 133.0) no description available & (reliability: 432.0) & (original description: Putative At5g28040, Description = DNA-binding storekeeper protein-related transcriptional regulator, PFAM = PF04504)' T '27.3.49' 'RNA.regulation of transcription.GeBP like' 'niben044scf00006392ctg001_2575-5321' '(at5g14280 : 306.0) DNA-binding storekeeper protein-related; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G27270.1); Has 335 Blast hits to 330 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 315; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 612.0) & (original description: Putative BnaA10g19410D, Description = BnaA10g19410D protein, PFAM = )' T '27.3.49' 'RNA.regulation of transcription.GeBP like' 'niben044scf00009456ctg022_1-2505' '(gnl|cdd|68089 : 120.0) no description available & (at1g61730 : 86.3) DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleolus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT4G00390.1); Has 9484 Blast hits to 2301 proteins in 293 species: Archae - 12; Bacteria - 1789; Metazoa - 891; Fungi - 666; Plants - 367; Viruses - 44; Other Eukaryotes - 5715 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative TCM_032355, Description = DNA-binding storekeeper protein-related transcriptional regulator, putative, PFAM = PF04504)' T '27.3.49' 'RNA.regulation of transcription.GeBP like' 'niben044scf00025579ctg015_1-4057' '(at5g28040 : 174.0) DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT3G04930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68089 : 139.0) no description available & (reliability: 348.0) & (original description: Putative At5g28040, Description = DNA-binding storekeeper protein-related transcriptional regulator, PFAM = PF04504)' T '27.3.49' 'RNA.regulation of transcription.GeBP like' 'niben101scf00611_661885-666194' '(at5g28040 : 206.0) DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT3G04930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68089 : 138.0) no description available & (reliability: 412.0) & (original description: Putative BnaC07g27630D, Description = BnaC07g27630D protein, PFAM = PF04504)' T '27.3.49' 'RNA.regulation of transcription.GeBP like' 'niben101scf01761_195328-198218' '(at5g14280 : 302.0) DNA-binding storekeeper protein-related; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G27270.1); Has 335 Blast hits to 330 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 315; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 604.0) & (original description: Putative BnaA10g19410D, Description = BnaA10g19410D protein, PFAM = )' T '27.3.49' 'RNA.regulation of transcription.GeBP like' 'niben101scf06876_184369-187662' '(at5g28040 : 215.0) DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT3G04930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68089 : 132.0) no description available & (reliability: 430.0) & (original description: Putative At5g28040, Description = DNA-binding storekeeper protein-related transcriptional regulator, PFAM = PF04504)' T '27.3.49' 'RNA.regulation of transcription.GeBP like' 'niben101scf18951_101753-104258' '(at5g14280 : 244.0) DNA-binding storekeeper protein-related; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G27270.1); Has 335 Blast hits to 330 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 315; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 488.0) & (original description: Putative BnaA10g19410D, Description = BnaA10g19410D protein, PFAM = PF03798)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.3scaffold1160_30523-42059' '(at3g55770 : 179.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1). & (p29675|sf3_helan : 138.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 135.0) no description available & (reliability: 358.0) & (original description: Putative PLIM2C, Description = LIM domain-containing protein PLIM2c, PFAM = PF00412;PF00412)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.3scaffold2245_68761-73901' '(at3g13960 : 166.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 5 (GRF5); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 2351 Blast hits to 1483 proteins in 168 species: Archae - 0; Bacteria - 108; Metazoa - 567; Fungi - 216; Plants - 548; Viruses - 4; Other Eukaryotes - 908 (source: NCBI BLink). & (gnl|cdd|72299 : 83.8) no description available & (reliability: 332.0) & (original description: Putative GRF1, Description = Growth-regulating factor 1, PFAM = PF08879;PF08880)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.3scaffold11413_11833-14766' '(at3g55770 : 164.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1). & (p29675|sf3_helan : 109.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 100.0) no description available & (reliability: 328.0) & (original description: Putative BLIM2a, Description = LIM domain protein BLIM2a, PFAM = PF00412)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.3scaffold12610_10135-24475' '(at3g52270 : 258.0) Transcription initiation factor IIF, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, catalytic activity, ATP binding; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIIF complex; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039), Transcription initiation factor IIF, beta subunit (InterPro:IPR003196); BEST Arabidopsis thaliana protein match is: Transcription initiation factor IIF, beta subunit (TAIR:AT1G75510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38116 : 202.0) no description available & (gnl|cdd|66000 : 95.1) no description available & (reliability: 516.0) & (original description: Putative At3g52270, Description = Transcription initiation factor IIF, beta subunit, PFAM = PF02270)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.3scaffold16817_5180-9924' '(gnl|cdd|38117 : 96.6) no description available & (at4g07950 : 88.6) DNA-directed RNA polymerase, subunit M, archaeal; FUNCTIONS IN: in 6 functions; INVOLVED IN: RNA elongation, regulation of transcription, DNA-dependent, transcription, regulation of transcription; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: male gametophyte; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, TFIIS-type (InterPro:IPR001222), DNA-directed RNA polymerase, M/15kDa subunit (InterPro:IPR001529), DNA-directed RNA polymerase, subunit M, archaeal (InterPro:IPR006288), DNA-directed RNA polymerase M, 15kDa subunit, conserved site (InterPro:IPR019761); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase, subunit M, archaeal (TAIR:AT1G01210.1); Has 1132 Blast hits to 1132 proteins in 328 species: Archae - 242; Bacteria - 0; Metazoa - 282; Fungi - 291; Plants - 114; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative Os02g0672700, Description = DNA-directed RNA polymerase subunit, PFAM = PF01096)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.3scaffold35694_9441-17980' '(at1g07470 : 286.0) Transcription factor IIA, alpha/beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter, transcription; LOCATED IN: transcription factor TFIIA complex; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Transcription factor IIA, alpha/beta subunit (InterPro:IPR004855), Transcription factor IIA, beta-barrel (InterPro:IPR009088), Transcription factor IIA, alpha subunit, N-terminal (InterPro:IPR013028), Transcription factor IIA, helical (InterPro:IPR009083); BEST Arabidopsis thaliana protein match is: Transcription factor IIA, alpha/beta subunit (TAIR:AT1G07480.2); Has 705 Blast hits to 589 proteins in 189 species: Archae - 0; Bacteria - 16; Metazoa - 386; Fungi - 167; Plants - 79; Viruses - 7; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|37863 : 181.0) no description available & (gnl|cdd|66805 : 174.0) no description available & (reliability: 572.0) & (original description: Putative TF1, Description = TF1, PFAM = PF03153;PF03153)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.3scaffold37801_9777-13483' '(at4g37740 : 90.9) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower; growth-regulating factor 2 (GRF2); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 1 (TAIR:AT2G22840.1); Has 745 Blast hits to 714 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 24; Plants - 532; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative GRF1, Description = Glutamine-Leucine-Glutamine, QLQ, PFAM = PF08879;PF08880)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.3scaffold48421_4287-9423' '(at1g01160 : 86.7) Arabidopsis thaliana GRF1-interacting factor 2 (GIF2) mRNA; GRF1-interacting factor 2 (GIF2); FUNCTIONS IN: protein binding, transcription coactivator activity; INVOLVED IN: cell proliferation, leaf development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SSXT (InterPro:IPR007726); BEST Arabidopsis thaliana protein match is: GRF1-interacting factor 3 (TAIR:AT4G00850.1); Has 35 Blast hits to 35 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 5; Plants - 17; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative AN3, Description = AtGIF1, PFAM = PF05030)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.3scaffold49478_3158-9204' '(at1g75510 : 165.0) Transcription initiation factor IIF, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, general RNA polymerase II transcription factor activity, catalytic activity, ATP binding, ATP-dependent helicase activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter, transcription from RNA polymerase II promoter; LOCATED IN: mitochondrion, transcription factor TFIIF complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039), Transcription initiation factor IIF, beta subunit (InterPro:IPR003196), Transcription initiation factor IIF, beta subunit, subgroup (InterPro:IPR016640); BEST Arabidopsis thaliana protein match is: Transcription initiation factor IIF, beta subunit (TAIR:AT3G52270.1); Has 346 Blast hits to 346 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 128; Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|38116 : 135.0) no description available & (reliability: 322.0) & (original description: Putative umc1196a, Description = General transcription factor IIF subunit 2, PFAM = PF02270)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.3scaffold66204_1642-9175' '(at3g13960 : 150.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 5 (GRF5); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 2351 Blast hits to 1483 proteins in 168 species: Archae - 0; Bacteria - 108; Metazoa - 567; Fungi - 216; Plants - 548; Viruses - 4; Other Eukaryotes - 908 (source: NCBI BLink). & (gnl|cdd|72299 : 84.6) no description available & (reliability: 300.0) & (original description: Putative GRF3, Description = Growth-regulating factor 3, PFAM = PF08879;PF08880)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.5scaffold524_287276-292648' '(at4g10920 : 137.0) Transcriptional co-activator. Forms homodimers or heterodimers with the kiwi protein. Both proteins are involved in gene activation during pathogen defense and plant development.; KELP; FUNCTIONS IN: transcription coactivator activity, transcription regulator activity, DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Transcriptional coactivator p15 (InterPro:IPR003173), RNA polymerase II transcriptional coactivator KELP (InterPro:IPR017415), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: zinc knuckle (CCHC-type) family protein (TAIR:AT4G00980.1); Has 495 Blast hits to 482 proteins in 169 species: Archae - 0; Bacteria - 4; Metazoa - 182; Fungi - 115; Plants - 140; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|37923 : 83.1) no description available & (gnl|cdd|85919 : 80.8) no description available & (reliability: 274.0) & (original description: Putative KELP, Description = KELP, PFAM = PF08766;PF02229)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.5scaffold740_546661-556434' '(at3g13960 : 114.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 5 (GRF5); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 2351 Blast hits to 1483 proteins in 168 species: Archae - 0; Bacteria - 108; Metazoa - 567; Fungi - 216; Plants - 548; Viruses - 4; Other Eukaryotes - 908 (source: NCBI BLink). & (gnl|cdd|72299 : 80.8) no description available & (reliability: 228.0) & (original description: Putative GRF1, Description = Growth-regulating factor 1, PFAM = PF08879;PF08880)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.5scaffold865_472579-478691' '(at1g07470 : 187.0) Transcription factor IIA, alpha/beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter, transcription; LOCATED IN: transcription factor TFIIA complex; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Transcription factor IIA, alpha/beta subunit (InterPro:IPR004855), Transcription factor IIA, beta-barrel (InterPro:IPR009088), Transcription factor IIA, alpha subunit, N-terminal (InterPro:IPR013028), Transcription factor IIA, helical (InterPro:IPR009083); BEST Arabidopsis thaliana protein match is: Transcription factor IIA, alpha/beta subunit (TAIR:AT1G07480.2); Has 705 Blast hits to 589 proteins in 189 species: Archae - 0; Bacteria - 16; Metazoa - 386; Fungi - 167; Plants - 79; Viruses - 7; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|37863 : 108.0) no description available & (gnl|cdd|66805 : 103.0) no description available & (reliability: 374.0) & (original description: Putative BnaA10g04880D, Description = BnaA10g04880D protein, PFAM = PF03153)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.5scaffold2333_169734-196373' '(at5g41580 : 166.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MIZ-type (InterPro:IPR004181); BEST Arabidopsis thaliana protein match is: zinc ion binding;zinc ion binding (TAIR:AT1G08910.1); Has 2409 Blast hits to 1813 proteins in 283 species: Archae - 4; Bacteria - 96; Metazoa - 1110; Fungi - 536; Plants - 146; Viruses - 31; Other Eukaryotes - 486 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative , Description = Sumo ligase, putative, PFAM = )' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.5scaffold3677_213965-226761' '(at4g37740 : 90.1) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower; growth-regulating factor 2 (GRF2); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 1 (TAIR:AT2G22840.1); Has 745 Blast hits to 714 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 24; Plants - 532; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative GRF1, Description = Glutamine-Leucine-Glutamine, QLQ, PFAM = PF08880;PF08879)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.5scaffold3743_162539-176542' '(at4g39160 : 153.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SANT, eukarya (InterPro:IPR017884). & (reliability: 306.0) & (original description: Putative PGSC0003DMG402017733, Description = BnaA06g40770D protein, PFAM = PF15963)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.5scaffold7694_13941-24505' '(at1g01780 : 135.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G45800.1); Has 4819 Blast hits to 3002 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 4032; Fungi - 22; Plants - 446; Viruses - 0; Other Eukaryotes - 319 (source: NCBI BLink). & (p29675|sf3_helan : 105.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 90.9) no description available & (reliability: 266.0) & (original description: Putative atl2, Description = Pollen-specific protein SF3, PFAM = PF00412)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.5scaffold7787_39470-44777' '(at2g45480 : 122.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development.; growth-regulating factor 9 (GRF9); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 3 (TAIR:AT2G36400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative GRF3, Description = Growth-regulating factor 5, PFAM = PF08880;PF08879;PF08879)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'nbv0.5scaffold8202_23412-27704' '(at1g01160 : 85.9) Arabidopsis thaliana GRF1-interacting factor 2 (GIF2) mRNA; GRF1-interacting factor 2 (GIF2); FUNCTIONS IN: protein binding, transcription coactivator activity; INVOLVED IN: cell proliferation, leaf development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SSXT (InterPro:IPR007726); BEST Arabidopsis thaliana protein match is: GRF1-interacting factor 3 (TAIR:AT4G00850.1); Has 35 Blast hits to 35 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 5; Plants - 17; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative AN3, Description = AtGIF1, PFAM = PF05030)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben044scf00000193ctg007_17113-22840' '(at3g55770 : 180.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1). & (p29675|sf3_helan : 138.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 137.0) no description available & (reliability: 360.0) & (original description: Putative atl2, Description = Pollen-specific protein SF3, PFAM = PF00412;PF00412)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben044scf00002770ctg022_1516-6243' '(at2g45480 : 121.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development.; growth-regulating factor 9 (GRF9); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 3 (TAIR:AT2G36400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative GRF1, Description = Growth-regulating factor, PFAM = PF08880;PF08879;PF08879)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben044scf00007991ctg008_16177-18391' '(at5g23710 : 150.0) DNA binding;DNA-directed RNA polymerases; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rpc34-like (InterPro:IPR016049), RNA polymerase Rpc34 (InterPro:IPR007832); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38443 : 142.0) no description available & (gnl|cdd|68720 : 97.7) no description available & (reliability: 300.0) & (original description: Putative At5g23710, Description = At5g23710, PFAM = PF05158)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben044scf00010450ctg003_14923-19348' '(at4g24150 : 128.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in shoot and flower.; growth-regulating factor 8 (GRF8); FUNCTIONS IN: transcription activator activity; INVOLVED IN: leaf development; LOCATED IN: nucleus, chloroplast envelope; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 7 (TAIR:AT5G53660.1); Has 485 Blast hits to 474 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 485; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72299 : 81.1) no description available & (reliability: 232.0) & (original description: Putative GRF1, Description = Growth-regulating factor 5, PFAM = PF08880;PF08879)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben044scf00019506ctg005_4251-8988' '(at5g53660 : 121.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in shoot and flower.; growth-regulating factor 7 (GRF7); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 8 (TAIR:AT4G24150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|72299 : 82.3) no description available & (reliability: 230.0) & (original description: Putative GRF1, Description = Growth-regulating factor 1, PFAM = PF08879;PF08880)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben044scf00022391ctg002_223-4484' '(at5g09380 : 159.0) RNA polymerase III RPC4; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription from RNA polymerase III promoter; LOCATED IN: DNA-directed RNA polymerase III complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase III Rpc4 (InterPro:IPR007811); BEST Arabidopsis thaliana protein match is: RNA polymerase III RPC4 (TAIR:AT4G25180.1); Has 234 Blast hits to 234 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 103; Fungi - 41; Plants - 59; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|38332 : 139.0) no description available & (gnl|cdd|68697 : 93.9) no description available & (reliability: 318.0) & (original description: Putative Os01g0889200, Description = Os01g0889200 protein, PFAM = PF05132)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben044scf00026189ctg005_37275-42280' '(at3g55770 : 277.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1). & (p29675|sf3_helan : 182.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 169.0) no description available & (reliability: 554.0) & (original description: Putative WLIM2B, Description = LIM domain-containing protein WLIM2b, PFAM = PF00412;PF00412)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben044scf00027413ctg003_1-2965' '(at5g09380 : 168.0) RNA polymerase III RPC4; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription from RNA polymerase III promoter; LOCATED IN: DNA-directed RNA polymerase III complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase III Rpc4 (InterPro:IPR007811); BEST Arabidopsis thaliana protein match is: RNA polymerase III RPC4 (TAIR:AT4G25180.1); Has 234 Blast hits to 234 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 103; Fungi - 41; Plants - 59; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|38332 : 149.0) no description available & (gnl|cdd|68697 : 108.0) no description available & (reliability: 336.0) & (original description: Putative KK1_047346, Description = DNA-directed RNA polymerase III subunit RPC4, PFAM = PF05132)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben044scf00030819ctg000_1-3141' '(at3g13960 : 158.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 5 (GRF5); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 2351 Blast hits to 1483 proteins in 168 species: Archae - 0; Bacteria - 108; Metazoa - 567; Fungi - 216; Plants - 548; Viruses - 4; Other Eukaryotes - 908 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative GRF1, Description = Growth-regulating factor 5, PFAM = PF08880;PF08879)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben044scf00047859ctg000_9129-12569' '(at1g73230 : 167.0) Nascent polypeptide-associated complex NAC; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: basic transcription factor 3 (TAIR:AT1G17880.1); Has 832 Blast hits to 832 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 423; Fungi - 174; Plants - 145; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (gnl|cdd|37451 : 155.0) no description available & (reliability: 334.0) & (original description: Putative BTF3, Description = Basic transcription factor 3, PFAM = PF01849)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben044scf00054622ctg002_852-6775' '(at3g13960 : 156.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 5 (GRF5); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 2351 Blast hits to 1483 proteins in 168 species: Archae - 0; Bacteria - 108; Metazoa - 567; Fungi - 216; Plants - 548; Viruses - 4; Other Eukaryotes - 908 (source: NCBI BLink). & (gnl|cdd|72299 : 85.0) no description available & (reliability: 312.0) & (original description: Putative GRF3, Description = Growth-regulating factor 3, PFAM = PF08880;PF08879)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben044scf00058323ctg003_3806-8810' '(at3g13940 : 286.0) DNA binding;DNA-directed RNA polymerases; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase I associated factor, A49-like (InterPro:IPR009668); Has 222 Blast hits to 222 proteins in 107 species: Archae - 0; Bacteria - 2; Metazoa - 66; Fungi - 105; Plants - 33; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|39385 : 172.0) no description available & (gnl|cdd|70343 : 166.0) no description available & (reliability: 572.0) & (original description: Putative At3g13940, Description = DNA binding / DNA-directed RNA polymerase, PFAM = PF06870)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf00132_116689-129112' '(at4g10920 : 150.0) Transcriptional co-activator. Forms homodimers or heterodimers with the kiwi protein. Both proteins are involved in gene activation during pathogen defense and plant development.; KELP; FUNCTIONS IN: transcription coactivator activity, transcription regulator activity, DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Transcriptional coactivator p15 (InterPro:IPR003173), RNA polymerase II transcriptional coactivator KELP (InterPro:IPR017415), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: zinc knuckle (CCHC-type) family protein (TAIR:AT4G00980.1); Has 495 Blast hits to 482 proteins in 169 species: Archae - 0; Bacteria - 4; Metazoa - 182; Fungi - 115; Plants - 140; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|37923 : 100.0) no description available & (gnl|cdd|85919 : 98.1) no description available & (reliability: 300.0) & (original description: Putative KELP, Description = RNA polymerase II transcriptional coactivator KELP, PFAM = PF02229;PF08766)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf00239_900072-902308' '(at5g23710 : 92.0) DNA binding;DNA-directed RNA polymerases; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rpc34-like (InterPro:IPR016049), RNA polymerase Rpc34 (InterPro:IPR007832); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative PGSC0003DMG400003846, Description = DNA-directed RNA polymerase III subunit RPC6, PFAM = PF05158)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf00592_1158967-1163955' '(at5g09250 : 100.0) putative transcriptional co-activator (KIWI) mRNA, complete; KIWI; FUNCTIONS IN: protein binding, transcription coactivator activity, DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Transcriptional coactivator p15 (InterPro:IPR003173); BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT5G09240.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85919 : 86.9) no description available & (gnl|cdd|37923 : 85.4) no description available & (reliability: 200.0) & (original description: Putative KIWI, Description = RNA polymerase II transcriptional coactivator KIWI, PFAM = PF02229)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf00647_126529-130479' '(at2g39900 : 137.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT3G55770.5); Has 4468 Blast hits to 3092 proteins in 184 species: Archae - 0; Bacteria - 0; Metazoa - 3526; Fungi - 76; Plants - 531; Viruses - 0; Other Eukaryotes - 335 (source: NCBI BLink). & (p29675|sf3_helan : 107.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 92.8) no description available & (reliability: 268.0) & (original description: Putative BLIM2a, Description = LIM domain protein BLIM2a, PFAM = PF00412)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf01027_146715-161329' '(at5g41580 : 382.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MIZ-type (InterPro:IPR004181); BEST Arabidopsis thaliana protein match is: zinc ion binding;zinc ion binding (TAIR:AT1G08910.1); Has 2409 Blast hits to 1813 proteins in 283 species: Archae - 4; Bacteria - 96; Metazoa - 1110; Fungi - 536; Plants - 146; Viruses - 31; Other Eukaryotes - 486 (source: NCBI BLink). & (gnl|cdd|37380 : 124.0) no description available & (gnl|cdd|66556 : 87.2) no description available & (reliability: 764.0) & (original description: Putative PIAL1, Description = BnaA09g48660D protein, PFAM = PF02891)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf01111_589445-595172' '(at3g55770 : 178.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1). & (p29675|sf3_helan : 137.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 135.0) no description available & (reliability: 356.0) & (original description: Putative atl2, Description = Pollen-specific protein SF3, PFAM = PF00412;PF00412)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf01145_294660-311319' '(at3g13960 : 151.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 5 (GRF5); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 2351 Blast hits to 1483 proteins in 168 species: Archae - 0; Bacteria - 108; Metazoa - 567; Fungi - 216; Plants - 548; Viruses - 4; Other Eukaryotes - 908 (source: NCBI BLink). & (gnl|cdd|72299 : 84.2) no description available & (reliability: 302.0) & (original description: Putative GRF5, Description = Growth-regulating factor 5, PFAM = PF08879;PF08880)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf01437_321008-328222' '(at3g13960 : 154.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 5 (GRF5); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 2351 Blast hits to 1483 proteins in 168 species: Archae - 0; Bacteria - 108; Metazoa - 567; Fungi - 216; Plants - 548; Viruses - 4; Other Eukaryotes - 908 (source: NCBI BLink). & (gnl|cdd|72299 : 81.9) no description available & (reliability: 308.0) & (original description: Putative GRF4, Description = Growth-regulating factor 4, PFAM = PF08879;PF08880)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf01482_259811-268600' '(at1g07470 : 287.0) Transcription factor IIA, alpha/beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter, transcription; LOCATED IN: transcription factor TFIIA complex; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Transcription factor IIA, alpha/beta subunit (InterPro:IPR004855), Transcription factor IIA, beta-barrel (InterPro:IPR009088), Transcription factor IIA, alpha subunit, N-terminal (InterPro:IPR013028), Transcription factor IIA, helical (InterPro:IPR009083); BEST Arabidopsis thaliana protein match is: Transcription factor IIA, alpha/beta subunit (TAIR:AT1G07480.2); Has 705 Blast hits to 589 proteins in 189 species: Archae - 0; Bacteria - 16; Metazoa - 386; Fungi - 167; Plants - 79; Viruses - 7; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|37863 : 182.0) no description available & (gnl|cdd|66805 : 176.0) no description available & (reliability: 574.0) & (original description: Putative TF1, Description = TF1, PFAM = PF03153;PF03153)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf01798_821345-824487' '(at1g73230 : 171.0) Nascent polypeptide-associated complex NAC; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: basic transcription factor 3 (TAIR:AT1G17880.1); Has 832 Blast hits to 832 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 423; Fungi - 174; Plants - 145; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (gnl|cdd|37451 : 152.0) no description available & (reliability: 340.0) & (original description: Putative BTF3, Description = Basic transcription factor 3, PFAM = PF01849)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf01824_150461-156201' '(at2g39900 : 218.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT3G55770.5); Has 4468 Blast hits to 3092 proteins in 184 species: Archae - 0; Bacteria - 0; Metazoa - 3526; Fungi - 76; Plants - 531; Viruses - 0; Other Eukaryotes - 335 (source: NCBI BLink). & (p29675|sf3_helan : 166.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 150.0) no description available & (reliability: 418.0) & (original description: Putative atl2, Description = Pollen-specific protein SF3, PFAM = PF00412;PF00412)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf01830_99899-105548' '(at4g37740 : 92.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower; growth-regulating factor 2 (GRF2); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 1 (TAIR:AT2G22840.1); Has 745 Blast hits to 714 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 24; Plants - 532; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (gnl|cdd|72299 : 80.4) no description available & (reliability: 184.0) & (original description: Putative GRF1, Description = Growth-regulating factor 1, PFAM = PF08879;PF08880)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf01863_719457-725253' '(at2g22840 : 308.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower; growth-regulating factor 1 (GRF1); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 714 Blast hits to 669 proteins in 68 species: Archae - 0; Bacteria - 24; Metazoa - 65; Fungi - 20; Plants - 548; Viruses - 4; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|72299 : 88.1) no description available & (reliability: 616.0) & (original description: Putative GRF1, Description = Growth-regulating factor 1, PFAM = PF08879;PF08880)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf02459_120197-141704' '(at1g17680 : 665.0) tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 5584 Blast hits to 3296 proteins in 567 species: Archae - 79; Bacteria - 1266; Metazoa - 1500; Fungi - 759; Plants - 424; Viruses - 52; Other Eukaryotes - 1504 (source: NCBI BLink). & (gnl|cdd|37287 : 487.0) no description available & (reliability: 1330.0) & (original description: Putative glysoja_020404, Description = General transcription factor 3C polypeptide 3, PFAM = PF13174;PF14559;PF13414)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf02606_629841-635257' '(at4g07950 : 105.0) DNA-directed RNA polymerase, subunit M, archaeal; FUNCTIONS IN: in 6 functions; INVOLVED IN: RNA elongation, regulation of transcription, DNA-dependent, transcription, regulation of transcription; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: male gametophyte; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, TFIIS-type (InterPro:IPR001222), DNA-directed RNA polymerase, M/15kDa subunit (InterPro:IPR001529), DNA-directed RNA polymerase, subunit M, archaeal (InterPro:IPR006288), DNA-directed RNA polymerase M, 15kDa subunit, conserved site (InterPro:IPR019761); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase, subunit M, archaeal (TAIR:AT1G01210.1); Has 1132 Blast hits to 1132 proteins in 328 species: Archae - 242; Bacteria - 0; Metazoa - 282; Fungi - 291; Plants - 114; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink). & (gnl|cdd|38117 : 97.7) no description available & (reliability: 210.0) & (original description: Putative Os02g0672700, Description = DNA-directed RNA polymerase subunit, PFAM = PF01096)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf03419_1064121-1069353' '(at2g22840 : 254.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower; growth-regulating factor 1 (GRF1); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 714 Blast hits to 669 proteins in 68 species: Archae - 0; Bacteria - 24; Metazoa - 65; Fungi - 20; Plants - 548; Viruses - 4; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|72299 : 86.2) no description available & (reliability: 508.0) & (original description: Putative GRF1, Description = Growth-regulating factor 1, PFAM = PF08879;PF08880)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf03708_359407-362523' '(at1g17880 : 190.0) basic transcription factor 3 (BTF3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: Nascent polypeptide-associated complex NAC (TAIR:AT1G73230.1); Has 841 Blast hits to 841 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 427; Fungi - 178; Plants - 145; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|37451 : 155.0) no description available & (reliability: 380.0) & (original description: Putative BTF3, Description = Basic transcription factor 3, PFAM = PF01849)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf04018_474650-479514' '(at3g13960 : 163.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 5 (GRF5); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 2351 Blast hits to 1483 proteins in 168 species: Archae - 0; Bacteria - 108; Metazoa - 567; Fungi - 216; Plants - 548; Viruses - 4; Other Eukaryotes - 908 (source: NCBI BLink). & (gnl|cdd|72299 : 82.3) no description available & (reliability: 326.0) & (original description: Putative GRF1, Description = Growth-regulating factor 1, PFAM = PF08880;PF08879)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf04018_564923-569674' '(at5g09380 : 190.0) RNA polymerase III RPC4; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription from RNA polymerase III promoter; LOCATED IN: DNA-directed RNA polymerase III complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase III Rpc4 (InterPro:IPR007811); BEST Arabidopsis thaliana protein match is: RNA polymerase III RPC4 (TAIR:AT4G25180.1); Has 234 Blast hits to 234 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 103; Fungi - 41; Plants - 59; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|38332 : 140.0) no description available & (gnl|cdd|68697 : 99.3) no description available & (reliability: 380.0) & (original description: Putative LOC100283887, Description = DNA binding protein, PFAM = PF05132)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf04093_27300-41196' '(at3g55770 : 272.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1). & (p29675|sf3_helan : 177.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 167.0) no description available & (reliability: 544.0) & (original description: Putative WLIM2B, Description = LIM domain-containing protein WLIM2b, PFAM = PF00412;PF00412)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf04398_611510-615086' '(at3g13960 : 162.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 5 (GRF5); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 2351 Blast hits to 1483 proteins in 168 species: Archae - 0; Bacteria - 108; Metazoa - 567; Fungi - 216; Plants - 548; Viruses - 4; Other Eukaryotes - 908 (source: NCBI BLink). & (gnl|cdd|72299 : 83.1) no description available & (reliability: 324.0) & (original description: Putative GRF1, Description = Growth-regulating factor 1, PFAM = PF08879;PF08880)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf04795_195185-218719' '(at3g52270 : 255.0) Transcription initiation factor IIF, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, catalytic activity, ATP binding; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIIF complex; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039), Transcription initiation factor IIF, beta subunit (InterPro:IPR003196); BEST Arabidopsis thaliana protein match is: Transcription initiation factor IIF, beta subunit (TAIR:AT1G75510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38116 : 203.0) no description available & (gnl|cdd|66000 : 93.2) no description available & (reliability: 510.0) & (original description: Putative At3g52270, Description = Transcription initiation factor IIF, beta subunit, PFAM = PF02270)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf04847_417949-440512' '(at1g55750 : 627.0) BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins); CONTAINS InterPro DOMAIN/s: Kelch related (InterPro:IPR013089), BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) (TAIR:AT3G61420.1); Has 363 Blast hits to 357 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 137; Fungi - 134; Plants - 65; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|37285 : 289.0) no description available & (reliability: 1174.0) & (original description: Putative BSD10, Description = Putative RNA polymerase II transcription factor B subunit 1-1, PFAM = PF08567;PF03909)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf05017_447680-452493' '(at3g55770 : 275.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1). & (p29675|sf3_helan : 182.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 171.0) no description available & (reliability: 550.0) & (original description: Putative WLIM2B, Description = LIM domain-containing protein WLIM2b, PFAM = PF00412;PF00412)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf05378_4447-22761' '(at4g39160 : 145.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SANT, eukarya (InterPro:IPR017884). & (reliability: 290.0) & (original description: Putative PGSC0003DMG402017733, Description = Transcription factor TFIIIB component B, PFAM = PF15963)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf06042_319909-323241' '(at5g09380 : 167.0) RNA polymerase III RPC4; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription from RNA polymerase III promoter; LOCATED IN: DNA-directed RNA polymerase III complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase III Rpc4 (InterPro:IPR007811); BEST Arabidopsis thaliana protein match is: RNA polymerase III RPC4 (TAIR:AT4G25180.1); Has 234 Blast hits to 234 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 103; Fungi - 41; Plants - 59; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|38332 : 150.0) no description available & (gnl|cdd|68697 : 109.0) no description available & (reliability: 334.0) & (original description: Putative KK1_047346, Description = DNA-directed RNA polymerase III subunit RPC4, PFAM = PF05132)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf06504_97458-102830' '(at4g10920 : 156.0) Transcriptional co-activator. Forms homodimers or heterodimers with the kiwi protein. Both proteins are involved in gene activation during pathogen defense and plant development.; KELP; FUNCTIONS IN: transcription coactivator activity, transcription regulator activity, DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Transcriptional coactivator p15 (InterPro:IPR003173), RNA polymerase II transcriptional coactivator KELP (InterPro:IPR017415), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: zinc knuckle (CCHC-type) family protein (TAIR:AT4G00980.1); Has 495 Blast hits to 482 proteins in 169 species: Archae - 0; Bacteria - 4; Metazoa - 182; Fungi - 115; Plants - 140; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|37923 : 82.3) no description available & (gnl|cdd|85919 : 82.3) no description available & (reliability: 312.0) & (original description: Putative KELP, Description = RNA polymerase II transcriptional coactivator KELP, PFAM = PF02229;PF08766)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf06890_94273-99978' '(at3g25940 : 109.0) TFIIB zinc-binding protein; FUNCTIONS IN: transcription regulator activity, DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: RNA elongation, regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, TFIIS-type (InterPro:IPR001222); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20065.1); Has 975 Blast hits to 975 proteins in 277 species: Archae - 178; Bacteria - 0; Metazoa - 339; Fungi - 204; Plants - 110; Viruses - 3; Other Eukaryotes - 141 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative PGSC0003DMG400022038, Description = DNA-directed RNA polymerase subunit, PFAM = PF01096)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf06990_24932-27201' '(at5g23710 : 194.0) DNA binding;DNA-directed RNA polymerases; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rpc34-like (InterPro:IPR016049), RNA polymerase Rpc34 (InterPro:IPR007832); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38443 : 180.0) no description available & (gnl|cdd|68720 : 137.0) no description available & (reliability: 388.0) & (original description: Putative BnaC07g30610D, Description = BnaC07g30610D protein, PFAM = PF05158;PF05158)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf07314_381541-387141' '(at4g35540 : 350.0) zinc ion binding;transcription regulators; FUNCTIONS IN: transcription regulator activity, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription, transcription initiation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Cyclin-like (InterPro:IPR011028), Zinc finger, TFIIB-type (InterPro:IPR013137); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36811 : 205.0) no description available & (gnl|cdd|31595 : 83.0) no description available & (reliability: 700.0) & (original description: Putative PTF2, Description = Plant-specific TFIIB-related protein PTF2, PFAM = PF08271)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf08206_93739-98133' '(at5g53660 : 121.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in shoot and flower.; growth-regulating factor 7 (GRF7); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 8 (TAIR:AT4G24150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|72299 : 82.3) no description available & (reliability: 230.0) & (original description: Putative GRL7, Description = GRL7, PFAM = PF08879;PF08880)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf08206_212655-217791' '(at1g01160 : 87.8) Arabidopsis thaliana GRF1-interacting factor 2 (GIF2) mRNA; GRF1-interacting factor 2 (GIF2); FUNCTIONS IN: protein binding, transcription coactivator activity; INVOLVED IN: cell proliferation, leaf development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SSXT (InterPro:IPR007726); BEST Arabidopsis thaliana protein match is: GRF1-interacting factor 3 (TAIR:AT4G00850.1); Has 35 Blast hits to 35 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 5; Plants - 17; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative AN3, Description = GRF1-interacting factor 2, PFAM = PF05030)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf08419_108033-122556' '(at4g17020 : 714.0) transcription factor-related; FUNCTIONS IN: RNA polymerase II transcription factor activity; INVOLVED IN: DNA repair, regulation of transcription, DNA-dependent; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor Tfb2 (InterPro:IPR004598). & (gnl|cdd|38681 : 360.0) no description available & (gnl|cdd|67462 : 261.0) no description available & (reliability: 1428.0) & (original description: Putative TFB2, Description = RNA polymerase II transcription factor B subunit 2, PFAM = PF03849)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf08533_209137-217430' '(at3g52270 : 164.0) Transcription initiation factor IIF, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, catalytic activity, ATP binding; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIIF complex; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039), Transcription initiation factor IIF, beta subunit (InterPro:IPR003196); BEST Arabidopsis thaliana protein match is: Transcription initiation factor IIF, beta subunit (TAIR:AT1G75510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38116 : 135.0) no description available & (reliability: 328.0) & (original description: Putative umc1196a, Description = General transcription factor IIF subunit 2, PFAM = PF02270)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf08535_214966-219693' '(at3g13960 : 164.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 5 (GRF5); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 2351 Blast hits to 1483 proteins in 168 species: Archae - 0; Bacteria - 108; Metazoa - 567; Fungi - 216; Plants - 548; Viruses - 4; Other Eukaryotes - 908 (source: NCBI BLink). & (gnl|cdd|72299 : 83.8) no description available & (reliability: 328.0) & (original description: Putative GRF1, Description = Glutamine-Leucine-Glutamine, QLQ, PFAM = PF08880;PF08879)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf08751_108320-117376' '(at1g07470 : 187.0) Transcription factor IIA, alpha/beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter, transcription; LOCATED IN: transcription factor TFIIA complex; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Transcription factor IIA, alpha/beta subunit (InterPro:IPR004855), Transcription factor IIA, beta-barrel (InterPro:IPR009088), Transcription factor IIA, alpha subunit, N-terminal (InterPro:IPR013028), Transcription factor IIA, helical (InterPro:IPR009083); BEST Arabidopsis thaliana protein match is: Transcription factor IIA, alpha/beta subunit (TAIR:AT1G07480.2); Has 705 Blast hits to 589 proteins in 189 species: Archae - 0; Bacteria - 16; Metazoa - 386; Fungi - 167; Plants - 79; Viruses - 7; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|37863 : 106.0) no description available & (gnl|cdd|66805 : 101.0) no description available & (reliability: 374.0) & (original description: Putative BnaA10g04880D, Description = BnaA10g04880D protein, PFAM = PF03153)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf09130_63600-70422' '(at3g13960 : 114.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 5 (GRF5); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 2351 Blast hits to 1483 proteins in 168 species: Archae - 0; Bacteria - 108; Metazoa - 567; Fungi - 216; Plants - 548; Viruses - 4; Other Eukaryotes - 908 (source: NCBI BLink). & (gnl|cdd|72299 : 80.8) no description available & (reliability: 228.0) & (original description: Putative GRF4, Description = GRF domain class transcription factor, PFAM = PF08880;PF08879)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf09512_123788-151644' '(at5g41580 : 194.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MIZ-type (InterPro:IPR004181); BEST Arabidopsis thaliana protein match is: zinc ion binding;zinc ion binding (TAIR:AT1G08910.1); Has 2409 Blast hits to 1813 proteins in 283 species: Archae - 4; Bacteria - 96; Metazoa - 1110; Fungi - 536; Plants - 146; Viruses - 31; Other Eukaryotes - 486 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative glysoja_004814, Description = E3 SUMO-protein ligase pli1, PFAM = )' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf10776_19959-28365' '(at5g09380 : 161.0) RNA polymerase III RPC4; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription from RNA polymerase III promoter; LOCATED IN: DNA-directed RNA polymerase III complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase III Rpc4 (InterPro:IPR007811); BEST Arabidopsis thaliana protein match is: RNA polymerase III RPC4 (TAIR:AT4G25180.1); Has 234 Blast hits to 234 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 103; Fungi - 41; Plants - 59; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|38332 : 129.0) no description available & (gnl|cdd|68697 : 94.3) no description available & (reliability: 322.0) & (original description: Putative Os01g0889200, Description = Os01g0889200 protein, PFAM = PF05132)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf11491_127817-132465' '(at1g17680 : 466.0) tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 5584 Blast hits to 3296 proteins in 567 species: Archae - 79; Bacteria - 1266; Metazoa - 1500; Fungi - 759; Plants - 424; Viruses - 52; Other Eukaryotes - 1504 (source: NCBI BLink). & (gnl|cdd|37287 : 373.0) no description available & (reliability: 932.0) & (original description: Putative glysoja_020404, Description = General transcription factor 3C polypeptide 3, PFAM = PF13181;PF13176)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf13206_41820-47609' '(at2g45480 : 124.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development.; growth-regulating factor 9 (GRF9); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 3 (TAIR:AT2G36400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative GRF2, Description = Growth-regulating factor 5, PFAM = PF08880;PF08879;PF08879)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf17513_10986-14670' '(at4g37740 : 99.8) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower; growth-regulating factor 2 (GRF2); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 1 (TAIR:AT2G22840.1); Has 745 Blast hits to 714 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 24; Plants - 532; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 199.6) & (original description: Putative GRF1, Description = Growth-regulating factor 1, PFAM = PF08879;PF08880)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf25430_107790-113108' '(at3g13940 : 285.0) DNA binding;DNA-directed RNA polymerases; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase I associated factor, A49-like (InterPro:IPR009668); Has 222 Blast hits to 222 proteins in 107 species: Archae - 0; Bacteria - 2; Metazoa - 66; Fungi - 105; Plants - 33; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|39385 : 172.0) no description available & (gnl|cdd|70343 : 167.0) no description available & (reliability: 570.0) & (original description: Putative At3g13940, Description = DNA binding / DNA-directed RNA polymerase, PFAM = PF06870)' T '27.3.50' 'RNA.regulation of transcription.General Transcription' 'niben101scf33214_34015-37430' '(at1g17880 : 171.0) basic transcription factor 3 (BTF3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: Nascent polypeptide-associated complex NAC (TAIR:AT1G73230.1); Has 841 Blast hits to 841 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 427; Fungi - 178; Plants - 145; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|37451 : 157.0) no description available & (reliability: 342.0) & (original description: Putative btf3, Description = Nascent polypeptide-associated complex subunit beta, PFAM = PF01849)' T '27.3.50.1' 'RNA.regulation of transcription.General Transcription.Coactivator p15' '' '' '27.3.51' 'RNA.regulation of transcription.General Transcription, TBP-binding protein' 'nbv0.3scaffold18790_4670-16632' '(at5g25150 : 605.0) Encodes a putative TATA-binding-protein associated factor TAF5. TAFs are subunits of the general transcription factor IID (TFIID).; TBP-associated factor 5 (TAF5); FUNCTIONS IN: transcription regulator activity, nucleotide binding; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: guard cell, root, inflorescence, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), TFIID subunit, WD40-associated region (InterPro:IPR007582); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 114463 Blast hits to 42274 proteins in 991 species: Archae - 68; Bacteria - 11258; Metazoa - 46869; Fungi - 25620; Plants - 15010; Viruses - 3; Other Eukaryotes - 15635 (source: NCBI BLink). & (gnl|cdd|35484 : 407.0) no description available & (gnl|cdd|29257 : 205.0) no description available & (p93107|pf20_chlre : 97.8) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1210.0) & (original description: Putative taf5, Description = Transcription initiation factor TFIID subunit 5, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '27.3.51' 'RNA.regulation of transcription.General Transcription, TBP-binding protein' 'nbv0.5scaffold7681_1877-18739' '(at5g25150 : 891.0) Encodes a putative TATA-binding-protein associated factor TAF5. TAFs are subunits of the general transcription factor IID (TFIID).; TBP-associated factor 5 (TAF5); FUNCTIONS IN: transcription regulator activity, nucleotide binding; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: guard cell, root, inflorescence, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), TFIID subunit, WD40-associated region (InterPro:IPR007582); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 114463 Blast hits to 42274 proteins in 991 species: Archae - 68; Bacteria - 11258; Metazoa - 46869; Fungi - 25620; Plants - 15010; Viruses - 3; Other Eukaryotes - 15635 (source: NCBI BLink). & (gnl|cdd|35484 : 494.0) no description available & (gnl|cdd|29257 : 224.0) no description available & (p93107|pf20_chlre : 88.6) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1782.0) & (original description: Putative TAF5, Description = Transcription initiation factor TFIID subunit 5, PFAM = PF04494;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '27.3.51' 'RNA.regulation of transcription.General Transcription, TBP-binding protein' 'niben044scf00015930ctg002_17113-24922' '(at5g25150 : 595.0) Encodes a putative TATA-binding-protein associated factor TAF5. TAFs are subunits of the general transcription factor IID (TFIID).; TBP-associated factor 5 (TAF5); FUNCTIONS IN: transcription regulator activity, nucleotide binding; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: guard cell, root, inflorescence, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), TFIID subunit, WD40-associated region (InterPro:IPR007582); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 114463 Blast hits to 42274 proteins in 991 species: Archae - 68; Bacteria - 11258; Metazoa - 46869; Fungi - 25620; Plants - 15010; Viruses - 3; Other Eukaryotes - 15635 (source: NCBI BLink). & (gnl|cdd|35484 : 397.0) no description available & (gnl|cdd|29257 : 204.0) no description available & (p93107|pf20_chlre : 88.2) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1190.0) & (original description: Putative taf5, Description = Transcription initiation factor TFIID subunit 5, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '27.3.51' 'RNA.regulation of transcription.General Transcription, TBP-binding protein' 'niben044scf00018940ctg018_645-5884' '(at5g45600 : 296.0) The GSA41 human homolog is expressed in nuclei and binds NuMA, a component of the nuclear matrix in interphase nuclei. In addition to Arabidopsis, GSA41 is found in Drosophila, C.elegans, yeast and man.; GLIOMAS 41 (GAS41); INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: YEATS (InterPro:IPR005033); BEST Arabidopsis thaliana protein match is: TBP-associated factor 14 (TAIR:AT2G18000.2). & (gnl|cdd|38359 : 162.0) no description available & (gnl|cdd|67005 : 115.0) no description available & (reliability: 592.0) & (original description: Putative TAF14, Description = Transcription initiation factor TFIID subunit 14, PFAM = PF03366)' T '27.3.51' 'RNA.regulation of transcription.General Transcription, TBP-binding protein' 'niben044scf00020790ctg007_3498-8740' '(at5g45600 : 303.0) The GSA41 human homolog is expressed in nuclei and binds NuMA, a component of the nuclear matrix in interphase nuclei. In addition to Arabidopsis, GSA41 is found in Drosophila, C.elegans, yeast and man.; GLIOMAS 41 (GAS41); INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: YEATS (InterPro:IPR005033); BEST Arabidopsis thaliana protein match is: TBP-associated factor 14 (TAIR:AT2G18000.2). & (gnl|cdd|38359 : 163.0) no description available & (gnl|cdd|67005 : 118.0) no description available & (reliability: 606.0) & (original description: Putative TAF14B, Description = Transcription initiation factor TFIID subunit 14b, PFAM = PF03366)' T '27.3.51' 'RNA.regulation of transcription.General Transcription, TBP-binding protein' 'niben101scf00130_160129-182504' '(at5g25150 : 938.0) Encodes a putative TATA-binding-protein associated factor TAF5. TAFs are subunits of the general transcription factor IID (TFIID).; TBP-associated factor 5 (TAF5); FUNCTIONS IN: transcription regulator activity, nucleotide binding; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: guard cell, root, inflorescence, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), TFIID subunit, WD40-associated region (InterPro:IPR007582); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 114463 Blast hits to 42274 proteins in 991 species: Archae - 68; Bacteria - 11258; Metazoa - 46869; Fungi - 25620; Plants - 15010; Viruses - 3; Other Eukaryotes - 15635 (source: NCBI BLink). & (gnl|cdd|35484 : 497.0) no description available & (gnl|cdd|29257 : 227.0) no description available & (p93107|pf20_chlre : 102.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1876.0) & (original description: Putative TAF5, Description = Transcription initiation factor TFIID subunit 5, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF04494)' T '27.3.51' 'RNA.regulation of transcription.General Transcription, TBP-binding protein' 'niben101scf00130_160539-182354' '(at5g25150 : 944.0) Encodes a putative TATA-binding-protein associated factor TAF5. TAFs are subunits of the general transcription factor IID (TFIID).; TBP-associated factor 5 (TAF5); FUNCTIONS IN: transcription regulator activity, nucleotide binding; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: guard cell, root, inflorescence, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), TFIID subunit, WD40-associated region (InterPro:IPR007582); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 114463 Blast hits to 42274 proteins in 991 species: Archae - 68; Bacteria - 11258; Metazoa - 46869; Fungi - 25620; Plants - 15010; Viruses - 3; Other Eukaryotes - 15635 (source: NCBI BLink). & (gnl|cdd|35484 : 519.0) no description available & (gnl|cdd|29257 : 226.0) no description available & (p93107|pf20_chlre : 101.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1888.0) & (original description: Putative TAF5, Description = Transcription initiation factor TFIID subunit 5, PFAM = PF04494;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '27.3.51' 'RNA.regulation of transcription.General Transcription, TBP-binding protein' 'niben101scf03735_376969-382044' '(at5g45600 : 295.0) The GSA41 human homolog is expressed in nuclei and binds NuMA, a component of the nuclear matrix in interphase nuclei. In addition to Arabidopsis, GSA41 is found in Drosophila, C.elegans, yeast and man.; GLIOMAS 41 (GAS41); INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: YEATS (InterPro:IPR005033); BEST Arabidopsis thaliana protein match is: TBP-associated factor 14 (TAIR:AT2G18000.2). & (gnl|cdd|38359 : 164.0) no description available & (gnl|cdd|67005 : 116.0) no description available & (reliability: 590.0) & (original description: Putative TAF14B, Description = Transcription initiation factor TFIID subunit 14b, PFAM = PF03366)' T '27.3.51' 'RNA.regulation of transcription.General Transcription, TBP-binding protein' 'niben101scf09010_452656-457668' '(at5g45600 : 305.0) The GSA41 human homolog is expressed in nuclei and binds NuMA, a component of the nuclear matrix in interphase nuclei. In addition to Arabidopsis, GSA41 is found in Drosophila, C.elegans, yeast and man.; GLIOMAS 41 (GAS41); INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: YEATS (InterPro:IPR005033); BEST Arabidopsis thaliana protein match is: TBP-associated factor 14 (TAIR:AT2G18000.2). & (gnl|cdd|38359 : 168.0) no description available & (gnl|cdd|67005 : 119.0) no description available & (reliability: 610.0) & (original description: Putative TAF14B, Description = Transcription initiation factor TFIID subunit 14b, PFAM = PF03366)' T '27.3.51' 'RNA.regulation of transcription.General Transcription, TBP-binding protein' 'niben101scf14778_31038-35121' '(at3g56510 : 248.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: TATA-binding protein binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38362 : 174.0) no description available & (reliability: 496.0) & (original description: Putative v1g124028, Description = Predicted protein, PFAM = PF00076)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'nbv0.3scaffold18987_895-7662' '(at3g27260 : 413.0) Kinase like protein with similarity to yeast BDF1 and human RING3 protein, which have two bromodomains GTE8 has a single bromodomain; global transcription factor group E8 (GTE8); FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 9 (TAIR:AT5G14270.1). & (gnl|cdd|36687 : 203.0) no description available & (gnl|cdd|47625 : 109.0) no description available & (reliability: 826.0) & (original description: Putative GTE9, Description = Transcription factor GTE9, PFAM = PF00439;PF17035)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'nbv0.3scaffold23736_6204-10182' '(at5g65630 : 265.0) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE7 show some resistance to agrobacterium-mediated root transformation.; global transcription factor group E7 (GTE7); CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: global transcription factor group E2 (TAIR:AT5G10550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36687 : 205.0) no description available & (gnl|cdd|47625 : 99.6) no description available & (reliability: 530.0) & (original description: Putative GTE7, Description = Transcription factor GTE7, PFAM = PF00439;PF17035)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'nbv0.3scaffold49868_3025-11351' '(at2g34900 : 295.0) Encodes a member of the BET subgroup of bromodomain proteins, a novel class of putative transcription factors. Its expression is induced during seed imbibition and downregulated during germination. Seeds of a loss-of-function mutant allele, imb1, show impaired cotyledon greening during germination in abscisic acid (ABA) and express higher levels of ABI5 protein than the wild type. Moreover, imb1 seeds are deficient in the phytochrome A (phyA)-mediated very-low-fluence response of germination.; IMBIBITION-INDUCIBLE 1 (IMB1); CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: general transcription factor group E6 (TAIR:AT3G52280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36687 : 159.0) no description available & (gnl|cdd|47625 : 92.3) no description available & (reliability: 590.0) & (original description: Putative GTE1, Description = Transcription factor GTE1, PFAM = PF17035;PF00439)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'nbv0.3scaffold58730_1-12284' '(at4g08350 : 1100.0) global transcription factor group A2 (GTA2); FUNCTIONS IN: transcription elongation regulator activity, structural constituent of ribosome, sequence-specific DNA binding transcription factor activity; INVOLVED IN: translation, regulation of transcription from RNA polymerase II promoter, positive regulation of RNA elongation from RNA polymerase II promoter; LOCATED IN: ribosome, intracellular; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Transcription elongation factor Spt5 (InterPro:IPR017071), Transcription antitermination protein, NusG, N-terminal (InterPro:IPR006645), KOW (InterPro:IPR005824), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), Transcription elongation factor Spt5, NGN domain (InterPro:IPR005100); BEST Arabidopsis thaliana protein match is: Transcription elongation factor Spt5 (TAIR:AT2G34210.1); Has 14630 Blast hits to 9620 proteins in 607 species: Archae - 121; Bacteria - 647; Metazoa - 6069; Fungi - 2592; Plants - 1061; Viruses - 307; Other Eukaryotes - 3833 (source: NCBI BLink). & (gnl|cdd|37210 : 800.0) no description available & (gnl|cdd|34765 : 147.0) no description available & (reliability: 2200.0) & (original description: Putative At2g34210, Description = Putative transcription elongation factor SPT5 homolog 2, PFAM = PF11942;PF00467;PF00467;PF03439)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'nbv0.5scaffold489_663713-667743' '(at1g06230 : 345.0) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE4 show some resistance to agrobacterium-mediated root transformation.; global transcription factor group E4 (GTE4); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA mediated transformation, cell cycle, root development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G17790.1). & (gnl|cdd|36687 : 197.0) no description available & (gnl|cdd|47625 : 108.0) no description available & (reliability: 690.0) & (original description: Putative GTE2, Description = Transcription factor GTE4, PFAM = PF17035;PF00439)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'nbv0.5scaffold2562_264214-267939' '(gnl|cdd|37210 : 290.0) no description available & (at4g08350 : 276.0) global transcription factor group A2 (GTA2); FUNCTIONS IN: transcription elongation regulator activity, structural constituent of ribosome, sequence-specific DNA binding transcription factor activity; INVOLVED IN: translation, regulation of transcription from RNA polymerase II promoter, positive regulation of RNA elongation from RNA polymerase II promoter; LOCATED IN: ribosome, intracellular; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Transcription elongation factor Spt5 (InterPro:IPR017071), Transcription antitermination protein, NusG, N-terminal (InterPro:IPR006645), KOW (InterPro:IPR005824), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), Transcription elongation factor Spt5, NGN domain (InterPro:IPR005100); BEST Arabidopsis thaliana protein match is: Transcription elongation factor Spt5 (TAIR:AT2G34210.1); Has 14630 Blast hits to 9620 proteins in 607 species: Archae - 121; Bacteria - 647; Metazoa - 6069; Fungi - 2592; Plants - 1061; Viruses - 307; Other Eukaryotes - 3833 (source: NCBI BLink). & (reliability: 552.0) & (original description: Putative GTA1501, Description = Transcription elongation factor SPT5, PFAM = PF03439)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'nbv0.5scaffold2619_189382-194591' '(q7x923|spt16_orysa : 1372.0) FACT complex subunit SPT16 (Facilitates chromatin transcription complex subunit SPT16) - Oryza sativa (Rice) & (at4g10710 : 1360.0) encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.Along with SSRP1 binds to the promoter of FLC.; global transcription factor C (SPT16); INVOLVED IN: vegetative to reproductive phase transition of meristem; LOCATED IN: nuclear euchromatin, FACT complex, nucleolus, nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1747, eukaryote (InterPro:IPR013719), Peptidase M24, structural domain (InterPro:IPR000994), FACT complex subunit Spt16p/Cdc68p (InterPro:IPR013953); BEST Arabidopsis thaliana protein match is: GTC2 (TAIR:AT4G10670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36403 : 1013.0) no description available & (gnl|cdd|34965 : 650.0) no description available & (reliability: 2720.0) & (original description: Putative SPT16, Description = FACT complex subunit SPT16, PFAM = PF14826;PF00557;PF08512;PF08644)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben044scf00002359ctg010_1-2810' '(at5g63320 : 355.0) Encodes NPX1 (Nuclear Protein X1), a nuclear factor regulating abscisic acid responses.; nuclear protein X1 (NPX1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 9 (TAIR:AT5G14270.2); Has 5825 Blast hits to 4645 proteins in 254 species: Archae - 0; Bacteria - 2; Metazoa - 3479; Fungi - 996; Plants - 604; Viruses - 2; Other Eukaryotes - 742 (source: NCBI BLink). & (gnl|cdd|36687 : 213.0) no description available & (gnl|cdd|47625 : 109.0) no description available & (reliability: 650.0) & (original description: Putative BET9, Description = Bromodomain-containing protein, PFAM = PF17035;PF00439)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben044scf00006966ctg014_340-4765' '(at3g52280 : 239.0) Bromodomain containing nuclear-localized protein involved in leaf development. GTE6 binds to the promoter and intron of AS1 and regulates its expression via histone acetylation.; general transcription factor group E6 (GTE6); FUNCTIONS IN: histone acetyltransferase activity, DNA binding; INVOLVED IN: chromatin remodeling; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: Transcription factor GTE6 (TAIR:AT2G34900.1). & (gnl|cdd|36687 : 155.0) no description available & (gnl|cdd|47625 : 94.6) no description available & (reliability: 478.0) & (original description: Putative BRD2, Description = Global transcription factor group isoform 1, PFAM = PF00439)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben044scf00008985ctg019_11873-16335' '(at3g27260 : 286.0) Kinase like protein with similarity to yeast BDF1 and human RING3 protein, which have two bromodomains GTE8 has a single bromodomain; global transcription factor group E8 (GTE8); FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 9 (TAIR:AT5G14270.1). & (gnl|cdd|36687 : 220.0) no description available & (gnl|cdd|47625 : 112.0) no description available & (reliability: 572.0) & (original description: Putative BET9, Description = Bromodomain-containing protein, putative, PFAM = PF00439;PF17035)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben044scf00014576ctg000_2708-10456' '(at2g34900 : 281.0) Encodes a member of the BET subgroup of bromodomain proteins, a novel class of putative transcription factors. Its expression is induced during seed imbibition and downregulated during germination. Seeds of a loss-of-function mutant allele, imb1, show impaired cotyledon greening during germination in abscisic acid (ABA) and express higher levels of ABI5 protein than the wild type. Moreover, imb1 seeds are deficient in the phytochrome A (phyA)-mediated very-low-fluence response of germination.; IMBIBITION-INDUCIBLE 1 (IMB1); CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: general transcription factor group E6 (TAIR:AT3G52280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36687 : 143.0) no description available & (gnl|cdd|47625 : 85.3) no description available & (reliability: 562.0) & (original description: Putative GTE1, Description = Global transcription factor group isoform 1, PFAM = PF17035;PF00439)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben044scf00014897ctg006_3669-13606' '(at1g65440 : 1786.0) Related to yeast Spt6 protein, which functions as part of a protein complex in transcription initiation and also plays a role in chromatin structure / assembly.; global transcription factor group B1 (GTB1); FUNCTIONS IN: transcription elongation regulator activity, hydrolase activity, acting on ester bonds, RNA binding; INVOLVED IN: chromatin assembly or disassembly, transcription initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Resolvase, RNase H-like fold (InterPro:IPR006641), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Transcription elongation factor Spt6 (InterPro:IPR017072); BEST Arabidopsis thaliana protein match is: Transcription elongation factor Spt6 (TAIR:AT1G63210.1). & (gnl|cdd|37067 : 980.0) no description available & (gnl|cdd|32366 : 181.0) no description available & (reliability: 3572.0) & (original description: Putative GTB1, Description = Transcription elongation factor SPT6-like protein, PFAM = PF14641;PF14639;PF14878;PF14632;PF14635;PF14633)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben044scf00025913ctg011_2037-6105' '(at5g65630 : 284.0) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE7 show some resistance to agrobacterium-mediated root transformation.; global transcription factor group E7 (GTE7); CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: global transcription factor group E2 (TAIR:AT5G10550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36687 : 203.0) no description available & (gnl|cdd|47625 : 97.7) no description available & (reliability: 568.0) & (original description: Putative GTE4, Description = Transcription factor GTE4, PFAM = PF17035;PF00439)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf00351_574649-578635' '(at5g65630 : 281.0) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE7 show some resistance to agrobacterium-mediated root transformation.; global transcription factor group E7 (GTE7); CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: global transcription factor group E2 (TAIR:AT5G10550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36687 : 201.0) no description available & (gnl|cdd|47625 : 99.6) no description available & (reliability: 562.0) & (original description: Putative GTE7, Description = Transcription factor GTE7, PFAM = PF00439;PF17035)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf00367_494987-503711' '(at2g34900 : 282.0) Encodes a member of the BET subgroup of bromodomain proteins, a novel class of putative transcription factors. Its expression is induced during seed imbibition and downregulated during germination. Seeds of a loss-of-function mutant allele, imb1, show impaired cotyledon greening during germination in abscisic acid (ABA) and express higher levels of ABI5 protein than the wild type. Moreover, imb1 seeds are deficient in the phytochrome A (phyA)-mediated very-low-fluence response of germination.; IMBIBITION-INDUCIBLE 1 (IMB1); CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: general transcription factor group E6 (TAIR:AT3G52280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36687 : 150.0) no description available & (gnl|cdd|47625 : 89.6) no description available & (reliability: 564.0) & (original description: Putative BRD2, Description = Global transcription factor group isoform 1, PFAM = PF17035;PF00439)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf00398_295913-300471' '(at1g06230 : 329.0) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE4 show some resistance to agrobacterium-mediated root transformation.; global transcription factor group E4 (GTE4); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA mediated transformation, cell cycle, root development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G17790.1). & (gnl|cdd|36687 : 216.0) no description available & (gnl|cdd|47625 : 112.0) no description available & (reliability: 658.0) & (original description: Putative FSH, Description = Transcription factor GTE4, PFAM = PF17035;PF00439)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf00457_741114-743866' '(gnl|cdd|36687 : 119.0) no description available & (at1g06230 : 108.0) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE4 show some resistance to agrobacterium-mediated root transformation.; global transcription factor group E4 (GTE4); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA mediated transformation, cell cycle, root development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G17790.1). & (gnl|cdd|47625 : 90.7) no description available & (reliability: 216.0) & (original description: Putative GTE2, Description = Transcription factor GTE4, PFAM = PF00439)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf00714_782733-792005' '(at3g52280 : 322.0) Bromodomain containing nuclear-localized protein involved in leaf development. GTE6 binds to the promoter and intron of AS1 and regulates its expression via histone acetylation.; general transcription factor group E6 (GTE6); FUNCTIONS IN: histone acetyltransferase activity, DNA binding; INVOLVED IN: chromatin remodeling; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: Transcription factor GTE6 (TAIR:AT2G34900.1). & (gnl|cdd|36687 : 162.0) no description available & (gnl|cdd|47625 : 96.5) no description available & (reliability: 644.0) & (original description: Putative GTE1, Description = Transcription factor GTE1, PFAM = PF00439;PF17035)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf01964_57235-62420' '(q8h6b1|spt16_maize : 1376.0) FACT complex subunit SPT16 (Facilitates chromatin transcription complex subunit SPT16) (Global transcription factor group C protein 102) - Zea mays (Maize) & (at4g10710 : 1354.0) encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.Along with SSRP1 binds to the promoter of FLC.; global transcription factor C (SPT16); INVOLVED IN: vegetative to reproductive phase transition of meristem; LOCATED IN: nuclear euchromatin, FACT complex, nucleolus, nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1747, eukaryote (InterPro:IPR013719), Peptidase M24, structural domain (InterPro:IPR000994), FACT complex subunit Spt16p/Cdc68p (InterPro:IPR013953); BEST Arabidopsis thaliana protein match is: GTC2 (TAIR:AT4G10670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36403 : 1007.0) no description available & (gnl|cdd|34965 : 642.0) no description available & (reliability: 2708.0) & (original description: Putative SPT16, Description = FACT complex subunit SPT16, PFAM = PF00557;PF08644;PF08512;PF14826)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf01964_61893-67102' '(q7x923|spt16_orysa : 1368.0) FACT complex subunit SPT16 (Facilitates chromatin transcription complex subunit SPT16) - Oryza sativa (Rice) & (at4g10710 : 1357.0) encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.Along with SSRP1 binds to the promoter of FLC.; global transcription factor C (SPT16); INVOLVED IN: vegetative to reproductive phase transition of meristem; LOCATED IN: nuclear euchromatin, FACT complex, nucleolus, nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1747, eukaryote (InterPro:IPR013719), Peptidase M24, structural domain (InterPro:IPR000994), FACT complex subunit Spt16p/Cdc68p (InterPro:IPR013953); BEST Arabidopsis thaliana protein match is: GTC2 (TAIR:AT4G10670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36403 : 1013.0) no description available & (gnl|cdd|34965 : 647.0) no description available & (reliability: 2714.0) & (original description: Putative SPT16, Description = FACT complex subunit SPT16, PFAM = PF08644;PF08512;PF00557;PF14826)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf02392_31053-35120' '(at5g65630 : 290.0) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE7 show some resistance to agrobacterium-mediated root transformation.; global transcription factor group E7 (GTE7); CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: global transcription factor group E2 (TAIR:AT5G10550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36687 : 200.0) no description available & (gnl|cdd|47625 : 97.7) no description available & (reliability: 580.0) & (original description: Putative GTE4, Description = Transcription factor GTE4, PFAM = PF17035;PF00439)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf02525_739908-747803' '(at2g34900 : 292.0) Encodes a member of the BET subgroup of bromodomain proteins, a novel class of putative transcription factors. Its expression is induced during seed imbibition and downregulated during germination. Seeds of a loss-of-function mutant allele, imb1, show impaired cotyledon greening during germination in abscisic acid (ABA) and express higher levels of ABI5 protein than the wild type. Moreover, imb1 seeds are deficient in the phytochrome A (phyA)-mediated very-low-fluence response of germination.; IMBIBITION-INDUCIBLE 1 (IMB1); CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: general transcription factor group E6 (TAIR:AT3G52280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36687 : 158.0) no description available & (gnl|cdd|47625 : 90.7) no description available & (reliability: 584.0) & (original description: Putative GTE1, Description = Transcription factor GTE1, PFAM = PF00439;PF17035)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf03085_88801-92871' '(at1g06230 : 344.0) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE4 show some resistance to agrobacterium-mediated root transformation.; global transcription factor group E4 (GTE4); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA mediated transformation, cell cycle, root development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G17790.1). & (gnl|cdd|36687 : 192.0) no description available & (gnl|cdd|47625 : 104.0) no description available & (reliability: 688.0) & (original description: Putative BRD3, Description = Transcription factor GTE4, PFAM = PF00439;PF17035)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf03213_430598-438550' '(at5g63320 : 415.0) Encodes NPX1 (Nuclear Protein X1), a nuclear factor regulating abscisic acid responses.; nuclear protein X1 (NPX1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 9 (TAIR:AT5G14270.2); Has 5825 Blast hits to 4645 proteins in 254 species: Archae - 0; Bacteria - 2; Metazoa - 3479; Fungi - 996; Plants - 604; Viruses - 2; Other Eukaryotes - 742 (source: NCBI BLink). & (gnl|cdd|36687 : 203.0) no description available & (gnl|cdd|47625 : 108.0) no description available & (reliability: 754.0) & (original description: Putative BnaC03g51040D, Description = BnaC03g51040D protein, PFAM = PF00439;PF17035)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf03370_11007-22838' '(at1g65440 : 1784.0) Related to yeast Spt6 protein, which functions as part of a protein complex in transcription initiation and also plays a role in chromatin structure / assembly.; global transcription factor group B1 (GTB1); FUNCTIONS IN: transcription elongation regulator activity, hydrolase activity, acting on ester bonds, RNA binding; INVOLVED IN: chromatin assembly or disassembly, transcription initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Resolvase, RNase H-like fold (InterPro:IPR006641), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Transcription elongation factor Spt6 (InterPro:IPR017072); BEST Arabidopsis thaliana protein match is: Transcription elongation factor Spt6 (TAIR:AT1G63210.1). & (gnl|cdd|37067 : 1001.0) no description available & (gnl|cdd|32366 : 186.0) no description available & (reliability: 3568.0) & (original description: Putative GTB1, Description = Transcription elongation factor SPT6-like protein, PFAM = PF14641;PF14633;PF14878;PF14635;PF14639)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf03600_381693-388460' '(at3g27260 : 377.0) Kinase like protein with similarity to yeast BDF1 and human RING3 protein, which have two bromodomains GTE8 has a single bromodomain; global transcription factor group E8 (GTE8); FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 9 (TAIR:AT5G14270.1). & (gnl|cdd|36687 : 235.0) no description available & (gnl|cdd|47625 : 110.0) no description available & (reliability: 754.0) & (original description: Putative GTE11, Description = Transcription factor GTE11, PFAM = PF17035;PF00439)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf05340_165021-168130' '(at4g10710 : 95.9) encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.Along with SSRP1 binds to the promoter of FLC.; global transcription factor C (SPT16); INVOLVED IN: vegetative to reproductive phase transition of meristem; LOCATED IN: nuclear euchromatin, FACT complex, nucleolus, nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1747, eukaryote (InterPro:IPR013719), Peptidase M24, structural domain (InterPro:IPR000994), FACT complex subunit Spt16p/Cdc68p (InterPro:IPR013953); BEST Arabidopsis thaliana protein match is: GTC2 (TAIR:AT4G10670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8h6b1|spt16_maize : 91.7) FACT complex subunit SPT16 (Facilitates chromatin transcription complex subunit SPT16) (Global transcription factor group C protein 102) - Zea mays (Maize) & (reliability: 191.8) & (original description: Putative , Description = , PFAM = PF14826)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf05750_158098-166164' '(at5g63320 : 412.0) Encodes NPX1 (Nuclear Protein X1), a nuclear factor regulating abscisic acid responses.; nuclear protein X1 (NPX1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 9 (TAIR:AT5G14270.2); Has 5825 Blast hits to 4645 proteins in 254 species: Archae - 0; Bacteria - 2; Metazoa - 3479; Fungi - 996; Plants - 604; Viruses - 2; Other Eukaryotes - 742 (source: NCBI BLink). & (gnl|cdd|36687 : 206.0) no description available & (gnl|cdd|47625 : 107.0) no description available & (reliability: 744.0) & (original description: Putative GTE9, Description = Transcription factor GTE9, PFAM = PF17035;PF00439)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf10713_132647-137823' '(q7x923|spt16_orysa : 623.0) FACT complex subunit SPT16 (Facilitates chromatin transcription complex subunit SPT16) - Oryza sativa (Rice) & (at4g10710 : 605.0) encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.Along with SSRP1 binds to the promoter of FLC.; global transcription factor C (SPT16); INVOLVED IN: vegetative to reproductive phase transition of meristem; LOCATED IN: nuclear euchromatin, FACT complex, nucleolus, nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1747, eukaryote (InterPro:IPR013719), Peptidase M24, structural domain (InterPro:IPR000994), FACT complex subunit Spt16p/Cdc68p (InterPro:IPR013953); BEST Arabidopsis thaliana protein match is: GTC2 (TAIR:AT4G10670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36403 : 372.0) no description available & (gnl|cdd|29976 : 285.0) no description available & (reliability: 1210.0) & (original description: Putative SPT16, Description = FACT complex subunit SPT16, PFAM = PF08512;PF14826;PF00557)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf12205_484172-490584' '(gnl|cdd|36687 : 145.0) no description available & (at5g46550 : 129.0) DNA-binding bromodomain-containing protein; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 9 (TAIR:AT5G14270.1); Has 6307 Blast hits to 5240 proteins in 258 species: Archae - 2; Bacteria - 6; Metazoa - 3814; Fungi - 1080; Plants - 634; Viruses - 0; Other Eukaryotes - 771 (source: NCBI BLink). & (gnl|cdd|47625 : 101.0) no description available & (reliability: 258.0) & (original description: Putative NPX1, Description = Bromodomain-containing protein, putative, PFAM = PF00439)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf15995_86330-102690' '(at4g08350 : 920.0) global transcription factor group A2 (GTA2); FUNCTIONS IN: transcription elongation regulator activity, structural constituent of ribosome, sequence-specific DNA binding transcription factor activity; INVOLVED IN: translation, regulation of transcription from RNA polymerase II promoter, positive regulation of RNA elongation from RNA polymerase II promoter; LOCATED IN: ribosome, intracellular; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Transcription elongation factor Spt5 (InterPro:IPR017071), Transcription antitermination protein, NusG, N-terminal (InterPro:IPR006645), KOW (InterPro:IPR005824), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), Transcription elongation factor Spt5, NGN domain (InterPro:IPR005100); BEST Arabidopsis thaliana protein match is: Transcription elongation factor Spt5 (TAIR:AT2G34210.1); Has 14630 Blast hits to 9620 proteins in 607 species: Archae - 121; Bacteria - 647; Metazoa - 6069; Fungi - 2592; Plants - 1061; Viruses - 307; Other Eukaryotes - 3833 (source: NCBI BLink). & (gnl|cdd|37210 : 586.0) no description available & (gnl|cdd|34765 : 144.0) no description available & (reliability: 1840.0) & (original description: Putative GTA1501, Description = Transcription elongation factor SPT5, PFAM = PF11942;PF00467)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf26075_41889-57125' '(at4g08350 : 1250.0) global transcription factor group A2 (GTA2); FUNCTIONS IN: transcription elongation regulator activity, structural constituent of ribosome, sequence-specific DNA binding transcription factor activity; INVOLVED IN: translation, regulation of transcription from RNA polymerase II promoter, positive regulation of RNA elongation from RNA polymerase II promoter; LOCATED IN: ribosome, intracellular; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Transcription elongation factor Spt5 (InterPro:IPR017071), Transcription antitermination protein, NusG, N-terminal (InterPro:IPR006645), KOW (InterPro:IPR005824), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), Transcription elongation factor Spt5, NGN domain (InterPro:IPR005100); BEST Arabidopsis thaliana protein match is: Transcription elongation factor Spt5 (TAIR:AT2G34210.1); Has 14630 Blast hits to 9620 proteins in 607 species: Archae - 121; Bacteria - 647; Metazoa - 6069; Fungi - 2592; Plants - 1061; Viruses - 307; Other Eukaryotes - 3833 (source: NCBI BLink). & (gnl|cdd|37210 : 864.0) no description available & (gnl|cdd|34765 : 147.0) no description available & (reliability: 2500.0) & (original description: Putative At4g08350, Description = Putative transcription elongation factor SPT5 homolog 1, PFAM = PF00467;PF00467;PF11942;PF03439)' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf26075_47270-49760' '(at4g08350 : 180.0) global transcription factor group A2 (GTA2); FUNCTIONS IN: transcription elongation regulator activity, structural constituent of ribosome, sequence-specific DNA binding transcription factor activity; INVOLVED IN: translation, regulation of transcription from RNA polymerase II promoter, positive regulation of RNA elongation from RNA polymerase II promoter; LOCATED IN: ribosome, intracellular; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Transcription elongation factor Spt5 (InterPro:IPR017071), Transcription antitermination protein, NusG, N-terminal (InterPro:IPR006645), KOW (InterPro:IPR005824), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), Transcription elongation factor Spt5, NGN domain (InterPro:IPR005100); BEST Arabidopsis thaliana protein match is: Transcription elongation factor Spt5 (TAIR:AT2G34210.1); Has 14630 Blast hits to 9620 proteins in 607 species: Archae - 121; Bacteria - 647; Metazoa - 6069; Fungi - 2592; Plants - 1061; Viruses - 307; Other Eukaryotes - 3833 (source: NCBI BLink). & (gnl|cdd|37210 : 129.0) no description available & (reliability: 360.0) & (original description: Putative GTA1502, Description = Transcription elongation factor SPT5, PFAM = )' T '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'niben101scf35617_35213-48141' '(at3g52280 : 335.0) Bromodomain containing nuclear-localized protein involved in leaf development. GTE6 binds to the promoter and intron of AS1 and regulates its expression via histone acetylation.; general transcription factor group E6 (GTE6); FUNCTIONS IN: histone acetyltransferase activity, DNA binding; INVOLVED IN: chromatin remodeling; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: Transcription factor GTE6 (TAIR:AT2G34900.1). & (gnl|cdd|36687 : 170.0) no description available & (gnl|cdd|47625 : 96.1) no description available & (reliability: 670.0) & (original description: Putative GTE1, Description = Transcription factor GTE1, PFAM = PF00439;PF17035)' T '27.3.53' 'RNA.regulation of transcription.High mobility group (HMG) family' 'nbv0.3scaffold62970_574-11089' '(at2g34450 : 103.0) HMG-box (high mobility group) DNA-binding family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B2 (TAIR:AT1G20693.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative HMGB14, Description = High mobility group B protein 14, PFAM = PF00505)' T '27.3.53' 'RNA.regulation of transcription.High mobility group (HMG) family' 'niben101scf02107_287634-301528' '(at2g34450 : 103.0) HMG-box (high mobility group) DNA-binding family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B2 (TAIR:AT1G20693.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative NFD14, Description = HMG-box DNA-binding family protein isoform 1, PFAM = PF00505)' T '27.3.53' 'RNA.regulation of transcription.High mobility group (HMG) family' 'niben101scf02638_153781-164918' '(at2g34450 : 106.0) HMG-box (high mobility group) DNA-binding family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B2 (TAIR:AT1G20693.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative HMGB14, Description = High mobility group B protein 14, PFAM = PF00505)' T '27.3.53' 'RNA.regulation of transcription.High mobility group (HMG) family' 'niben101scf03985_358027-363510' '(at4g23800 : 226.0) HMG (high mobility group) box protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: HMG (high mobility group) box protein (TAIR:AT4G11080.1). & (reliability: 442.0) & (original description: Putative HMGB6, Description = High mobility group B protein 6, PFAM = PF00505;PF00505;PF00505)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'nbv0.3scaffold1191_66475-71706' '(at1g03650 : 226.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 3295 Blast hits to 3295 proteins in 1287 species: Archae - 200; Bacteria - 2223; Metazoa - 217; Fungi - 220; Plants - 88; Viruses - 0; Other Eukaryotes - 347 (source: NCBI BLink). & (gnl|cdd|38349 : 117.0) no description available & (reliability: 452.0) & (original description: Putative At1g03650, Description = Acyl-CoA N-acyltransferases-like protein, PFAM = PF00583)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'nbv0.3scaffold25095_586-28866' '(at3g54610 : 352.0) Encodes a histone acetyltransferase that is plays a role in the determination of the embryonic root-shoot axis. It is also required to regulate the floral meristem activity by modulating the extent of expression of WUS and AG. In other eukaryotes, this protein is recruited to specific promoters by DNA binding transcription factors and is thought to promote transcription by acetylating the N-terminal tail of histone H3. The enzyme has indeed been shown to catalyse primarily the acetylation of H3 histone with only traces of H4 and H2A/B being acetylated. Non-acetylated H3 peptide or an H3 peptide that had been previously acetylated on K9 both serve as excellent substrates for HAG1-catalyzed acetylation. However, prior acetylation of H3 lysine 14 blocks radioactive acetylation of the peptide by HAG1. HAG1 is specific for histone H3 lysine 14.; histone acetyltransferase of the GNAT family 1 (HAG1); FUNCTIONS IN: histone acetyltransferase activity, DNA binding, H3 histone acetyltransferase activity; INVOLVED IN: flower development, histone acetylation, response to light stimulus, positive regulation of transcription, root morphogenesis; LOCATED IN: histone acetyltransferase complex, nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Bromodomain, conserved site (InterPro:IPR018359), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: nuclear protein X1 (TAIR:AT5G63320.1); Has 13698 Blast hits to 5805 proteins in 367 species: Archae - 4; Bacteria - 1437; Metazoa - 4852; Fungi - 1484; Plants - 516; Viruses - 1; Other Eukaryotes - 5404 (source: NCBI BLink). & (gnl|cdd|36685 : 153.0) no description available & (reliability: 704.0) & (original description: Putative gcn5, Description = Histone acetyltransferase GCN5, PFAM = PF00583)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'nbv0.3scaffold41310_97-26473' '(at1g32750 : 1483.0) This gene is predicted to encode a histone acetyltransferase. Five lines with RNAi constructs directed against HAF1 grow normally and can produce root calli, but have defects in agrobacterium-mediated transformation.; HAF01; FUNCTIONS IN: histone acetyltransferase activity, DNA binding; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TAFII-230 TBP-binding (InterPro:IPR009067), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the TAFII250 family 2 (TAIR:AT3G19040.1); Has 22854 Blast hits to 14376 proteins in 1001 species: Archae - 24; Bacteria - 596; Metazoa - 11292; Fungi - 2677; Plants - 2799; Viruses - 159; Other Eukaryotes - 5307 (source: NCBI BLink). & (gnl|cdd|35232 : 801.0) no description available & (gnl|cdd|34778 : 191.0) no description available & (reliability: 2966.0) & (original description: Putative TAF1, Description = Transcription initiation factor TFIID subunit 1, PFAM = PF09247;PF00240;PF00439;PF12157)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'nbv0.3scaffold53487_5430-12280' '(at4g16420 : 167.0) Transcriptional co-activator. Essential for the developmental switch from cell proliferation to cell differentiation in response to variations in auxin and cytokinin concentrations.; homolog of yeast ADA2 2B (ADA2B); CONTAINS InterPro DOMAIN/s: SANT, eukarya (InterPro:IPR017884), SANT, DNA-binding (InterPro:IPR001005), Transcriptional adaptor 2 (InterPro:IPR016827), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SWIRM (InterPro:IPR007526), Zinc finger, ZZ-type (InterPro:IPR000433), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homolog of yeast ADA2 2A (TAIR:AT3G07740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35678 : 153.0) no description available & (gnl|cdd|34717 : 116.0) no description available & (reliability: 334.0) & (original description: Putative ADA2, Description = Transcriptional adapter ADA2, PFAM = PF00249;PF00569)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'nbv0.3scaffold77727_1170-7616' '(at5g56740 : 488.0) Encodes an enzyme with histone acetyltransferase activity. Histone H4 is the primary substrate for the enzyme. Prior acetylation of lysine 12 of histone H4 reduces radioactive acetylation by HAG2. HAG2 acetylates histone H4 lysine 12.; histone acetyltransferase of the GNAT family 2 (HAG2); FUNCTIONS IN: histone acetyltransferase activity, H4 histone acetyltransferase activity; INVOLVED IN: histone acetylation, chromatin modification, chromatin silencing at telomere; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone acetyltransferase type B, catalytic subunit (InterPro:IPR017380), GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Histone acetyl transferase HAT1 N-terminal (InterPro:IPR019467); Has 368 Blast hits to 368 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 147; Plants - 50; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (q6es10|hat1_orysa : 401.0) Probable acetyltransferase type B catalytic subunit (EC 2.3.1.48) (HAT B) - Oryza sativa (Rice) & (gnl|cdd|37907 : 237.0) no description available & (reliability: 976.0) & (original description: Putative HAG2, Description = Histone acetyltransferase type B catalytic subunit, PFAM = PF10394;PF00583)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'nbv0.5scaffold180_191395-246436' '(at3g54610 : 465.0) Encodes a histone acetyltransferase that is plays a role in the determination of the embryonic root-shoot axis. It is also required to regulate the floral meristem activity by modulating the extent of expression of WUS and AG. In other eukaryotes, this protein is recruited to specific promoters by DNA binding transcription factors and is thought to promote transcription by acetylating the N-terminal tail of histone H3. The enzyme has indeed been shown to catalyse primarily the acetylation of H3 histone with only traces of H4 and H2A/B being acetylated. Non-acetylated H3 peptide or an H3 peptide that had been previously acetylated on K9 both serve as excellent substrates for HAG1-catalyzed acetylation. However, prior acetylation of H3 lysine 14 blocks radioactive acetylation of the peptide by HAG1. HAG1 is specific for histone H3 lysine 14.; histone acetyltransferase of the GNAT family 1 (HAG1); FUNCTIONS IN: histone acetyltransferase activity, DNA binding, H3 histone acetyltransferase activity; INVOLVED IN: flower development, histone acetylation, response to light stimulus, positive regulation of transcription, root morphogenesis; LOCATED IN: histone acetyltransferase complex, nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Bromodomain, conserved site (InterPro:IPR018359), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: nuclear protein X1 (TAIR:AT5G63320.1); Has 13698 Blast hits to 5805 proteins in 367 species: Archae - 4; Bacteria - 1437; Metazoa - 4852; Fungi - 1484; Plants - 516; Viruses - 1; Other Eukaryotes - 5404 (source: NCBI BLink). & (gnl|cdd|36685 : 186.0) no description available & (gnl|cdd|34680 : 85.2) no description available & (reliability: 930.0) & (original description: Putative gcn5, Description = Histone acetyltransferase GCN5, PFAM = PF00439;PF00583)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'nbv0.5scaffold536_672179-684528' '(at1g79000 : 775.0) Homologous to CREB-binding protein, a co-activator of transcription with histone acetyl-transferase activity. No single prior lysine acetylation is sufficient to block HAC1 acetylation of the H3 or H4 peptides, suggesting that HAC1, HAC5, and HAC12 can acetylate any of several lysines present in the peptides. HAM2 acetylates histone H4 lysine 5. A plant line expressing an RNAi construct targeted against HAC1 has reduced rates of agrobacterium-mediated root transformation.; histone acetyltransferase of the CBP family 1 (HAC1); FUNCTIONS IN: histone acetyltransferase activity, transcription cofactor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, TAZ-type (InterPro:IPR000197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 12 (TAIR:AT1G16710.1). & (gnl|cdd|87003 : 291.0) no description available & (gnl|cdd|36989 : 134.0) no description available & (reliability: 1550.0) & (original description: Putative BnaAnng24420D, Description = BnaAnng24420D protein, PFAM = PF08214;PF02135)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'nbv0.5scaffold1683_410169-423865' '(at4g16420 : 307.0) Transcriptional co-activator. Essential for the developmental switch from cell proliferation to cell differentiation in response to variations in auxin and cytokinin concentrations.; homolog of yeast ADA2 2B (ADA2B); CONTAINS InterPro DOMAIN/s: SANT, eukarya (InterPro:IPR017884), SANT, DNA-binding (InterPro:IPR001005), Transcriptional adaptor 2 (InterPro:IPR016827), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SWIRM (InterPro:IPR007526), Zinc finger, ZZ-type (InterPro:IPR000433), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homolog of yeast ADA2 2A (TAIR:AT3G07740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35678 : 274.0) no description available & (gnl|cdd|34717 : 159.0) no description available & (reliability: 614.0) & (original description: Putative ADA2B, Description = Transcriptional adapter ADA2b, PFAM = PF00249;PF00569)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'nbv0.5scaffold1877_143768-153446' '(at1g79000 : 436.0) Homologous to CREB-binding protein, a co-activator of transcription with histone acetyl-transferase activity. No single prior lysine acetylation is sufficient to block HAC1 acetylation of the H3 or H4 peptides, suggesting that HAC1, HAC5, and HAC12 can acetylate any of several lysines present in the peptides. HAM2 acetylates histone H4 lysine 5. A plant line expressing an RNAi construct targeted against HAC1 has reduced rates of agrobacterium-mediated root transformation.; histone acetyltransferase of the CBP family 1 (HAC1); FUNCTIONS IN: histone acetyltransferase activity, transcription cofactor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, TAZ-type (InterPro:IPR000197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 12 (TAIR:AT1G16710.1). & (gnl|cdd|36989 : 206.0) no description available & (reliability: 872.0) & (original description: Putative HAC1, Description = Histone acetyltransferase HAC12, PFAM = PF00569;PF02135)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'nbv0.5scaffold1877_148373-154711' '(at1g79000 : 561.0) Homologous to CREB-binding protein, a co-activator of transcription with histone acetyl-transferase activity. No single prior lysine acetylation is sufficient to block HAC1 acetylation of the H3 or H4 peptides, suggesting that HAC1, HAC5, and HAC12 can acetylate any of several lysines present in the peptides. HAM2 acetylates histone H4 lysine 5. A plant line expressing an RNAi construct targeted against HAC1 has reduced rates of agrobacterium-mediated root transformation.; histone acetyltransferase of the CBP family 1 (HAC1); FUNCTIONS IN: histone acetyltransferase activity, transcription cofactor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, TAZ-type (InterPro:IPR000197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 12 (TAIR:AT1G16710.1). & (gnl|cdd|87003 : 274.0) no description available & (reliability: 1122.0) & (original description: Putative nej, Description = CREB-binding protein, PFAM = PF08214)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'nbv0.5scaffold2568_97027-117828' '(at4g37280 : 359.0) MRG family protein; FUNCTIONS IN: chromatin binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf3/MRG15 subunit (InterPro:IPR017398), MRG (InterPro:IPR008676), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: MRG family protein (TAIR:AT1G02740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69247 : 208.0) no description available & (gnl|cdd|38211 : 128.0) no description available & (reliability: 718.0) & (original description: Putative MRG1, Description = Protein MRG1, PFAM = PF05712)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben044scf00002622ctg002_1070-5354' '(at4g16420 : 270.0) Transcriptional co-activator. Essential for the developmental switch from cell proliferation to cell differentiation in response to variations in auxin and cytokinin concentrations.; homolog of yeast ADA2 2B (ADA2B); CONTAINS InterPro DOMAIN/s: SANT, eukarya (InterPro:IPR017884), SANT, DNA-binding (InterPro:IPR001005), Transcriptional adaptor 2 (InterPro:IPR016827), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SWIRM (InterPro:IPR007526), Zinc finger, ZZ-type (InterPro:IPR000433), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homolog of yeast ADA2 2A (TAIR:AT3G07740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35678 : 216.0) no description available & (gnl|cdd|34717 : 115.0) no description available & (reliability: 540.0) & (original description: Putative ADA2, Description = Transcriptional adapter ADA2a, PFAM = )' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben044scf00007662ctg015_1-16572' '(at1g16710 : 1431.0) Encodes an enzyme with histone acetyltransferase activity that can use both H3 and H4 histones as substrates. No single prior lysine acetylation is sufficient to block HAC12 acetylation of the H3 or H4 peptides, suggesting that HAC12 can acetylate any of several lysines present in the peptides.; histone acetyltransferase of the CBP family 12 (HAC12); FUNCTIONS IN: histone acetyltransferase activity, transcription cofactor activity; INVOLVED IN: flower development, regulation of transcription, DNA-dependent, protein amino acid acetylation; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, TAZ-type (InterPro:IPR000197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 1 (TAIR:AT1G79000.1). & (gnl|cdd|87003 : 294.0) no description available & (gnl|cdd|36989 : 173.0) no description available & (reliability: 2862.0) & (original description: Putative HAC1, Description = Histone acetyltransferase HAC1, PFAM = PF00628;PF00569;PF08214;PF02135)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben044scf00008173ctg013_1-2821' '(at4g16420 : 219.0) Transcriptional co-activator. Essential for the developmental switch from cell proliferation to cell differentiation in response to variations in auxin and cytokinin concentrations.; homolog of yeast ADA2 2B (ADA2B); CONTAINS InterPro DOMAIN/s: SANT, eukarya (InterPro:IPR017884), SANT, DNA-binding (InterPro:IPR001005), Transcriptional adaptor 2 (InterPro:IPR016827), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SWIRM (InterPro:IPR007526), Zinc finger, ZZ-type (InterPro:IPR000433), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homolog of yeast ADA2 2A (TAIR:AT3G07740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35678 : 165.0) no description available & (reliability: 438.0) & (original description: Putative ADA2, Description = Transcriptional adapter ADA2a, PFAM = )' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben044scf00008173ctg015_1-1341' '(at3g07740 : 98.6) encodes a transcriptional adaptor ADA2a that interacts with histone acetyltransferase GCN5 homolog and CBF1; homolog of yeast ADA2 2A (ADA2A); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: response to cold; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: SANT, eukarya (InterPro:IPR017884), SANT, DNA-binding (InterPro:IPR001005), Transcriptional adaptor 2 (InterPro:IPR016827), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SWIRM (InterPro:IPR007526), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: homolog of yeast ADA2 2B (TAIR:AT4G16420.2). & (reliability: 197.2) & (original description: Putative ADA2, Description = Transcriptional adapter ADA2a, PFAM = )' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben044scf00013870ctg001_1-6322' '(at4g16420 : 239.0) Transcriptional co-activator. Essential for the developmental switch from cell proliferation to cell differentiation in response to variations in auxin and cytokinin concentrations.; homolog of yeast ADA2 2B (ADA2B); CONTAINS InterPro DOMAIN/s: SANT, eukarya (InterPro:IPR017884), SANT, DNA-binding (InterPro:IPR001005), Transcriptional adaptor 2 (InterPro:IPR016827), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SWIRM (InterPro:IPR007526), Zinc finger, ZZ-type (InterPro:IPR000433), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homolog of yeast ADA2 2A (TAIR:AT3G07740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35678 : 199.0) no description available & (gnl|cdd|34717 : 149.0) no description available & (reliability: 478.0) & (original description: Putative ADA2, Description = Transcriptional adapter ADA2, PFAM = PF00249;PF00569)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben044scf00019884ctg002_1-11164' '(at1g02740 : 244.0) MRG family protein; FUNCTIONS IN: chromatin binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf3/MRG15 subunit (InterPro:IPR017398), Tudor-like, plant (InterPro:IPR014002), MRG (InterPro:IPR008676), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: MRG family protein (TAIR:AT4G37280.1); Has 1083 Blast hits to 947 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 790; Fungi - 163; Plants - 70; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|69247 : 182.0) no description available & (gnl|cdd|38211 : 125.0) no description available & (reliability: 488.0) & (original description: Putative MRG1, Description = Chromatin-binding protein, PFAM = PF05712)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben044scf00022229ctg002_290-8598' '(at1g32750 : 664.0) This gene is predicted to encode a histone acetyltransferase. Five lines with RNAi constructs directed against HAF1 grow normally and can produce root calli, but have defects in agrobacterium-mediated transformation.; HAF01; FUNCTIONS IN: histone acetyltransferase activity, DNA binding; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TAFII-230 TBP-binding (InterPro:IPR009067), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the TAFII250 family 2 (TAIR:AT3G19040.1); Has 22854 Blast hits to 14376 proteins in 1001 species: Archae - 24; Bacteria - 596; Metazoa - 11292; Fungi - 2677; Plants - 2799; Viruses - 159; Other Eukaryotes - 5307 (source: NCBI BLink). & (gnl|cdd|35232 : 454.0) no description available & (gnl|cdd|34778 : 201.0) no description available & (reliability: 1328.0) & (original description: Putative GTD1, Description = Transcription initiation factor TFIID subunit 1-A, PFAM = PF00240;PF12157)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben044scf00023848ctg001_1-5191' '(at1g32750 : 454.0) This gene is predicted to encode a histone acetyltransferase. Five lines with RNAi constructs directed against HAF1 grow normally and can produce root calli, but have defects in agrobacterium-mediated transformation.; HAF01; FUNCTIONS IN: histone acetyltransferase activity, DNA binding; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TAFII-230 TBP-binding (InterPro:IPR009067), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the TAFII250 family 2 (TAIR:AT3G19040.1); Has 22854 Blast hits to 14376 proteins in 1001 species: Archae - 24; Bacteria - 596; Metazoa - 11292; Fungi - 2677; Plants - 2799; Viruses - 159; Other Eukaryotes - 5307 (source: NCBI BLink). & (gnl|cdd|35232 : 266.0) no description available & (gnl|cdd|47625 : 80.3) no description available & (reliability: 908.0) & (original description: Putative GTD1, Description = Transcription initiation factor TFIID subunit 1-A, PFAM = PF00439;PF15288)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben044scf00025643ctg002_23556-32737' '(at1g79000 : 657.0) Homologous to CREB-binding protein, a co-activator of transcription with histone acetyl-transferase activity. No single prior lysine acetylation is sufficient to block HAC1 acetylation of the H3 or H4 peptides, suggesting that HAC1, HAC5, and HAC12 can acetylate any of several lysines present in the peptides. HAM2 acetylates histone H4 lysine 5. A plant line expressing an RNAi construct targeted against HAC1 has reduced rates of agrobacterium-mediated root transformation.; histone acetyltransferase of the CBP family 1 (HAC1); FUNCTIONS IN: histone acetyltransferase activity, transcription cofactor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, TAZ-type (InterPro:IPR000197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 12 (TAIR:AT1G16710.1). & (gnl|cdd|47852 : 109.0) no description available & (reliability: 1314.0) & (original description: Putative CAP, Description = Histone acetyltransferase HAC1, PFAM = PF00628;PF02135)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben044scf00041592ctg000_1885-8550' '(at4g16420 : 225.0) Transcriptional co-activator. Essential for the developmental switch from cell proliferation to cell differentiation in response to variations in auxin and cytokinin concentrations.; homolog of yeast ADA2 2B (ADA2B); CONTAINS InterPro DOMAIN/s: SANT, eukarya (InterPro:IPR017884), SANT, DNA-binding (InterPro:IPR001005), Transcriptional adaptor 2 (InterPro:IPR016827), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SWIRM (InterPro:IPR007526), Zinc finger, ZZ-type (InterPro:IPR000433), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homolog of yeast ADA2 2A (TAIR:AT3G07740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35678 : 199.0) no description available & (gnl|cdd|34717 : 140.0) no description available & (reliability: 450.0) & (original description: Putative BnaC01g21680D, Description = BnaC01g21680D protein, PFAM = PF00249;PF00569)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf00377_24801-45675' '(at1g16710 : 1660.0) Encodes an enzyme with histone acetyltransferase activity that can use both H3 and H4 histones as substrates. No single prior lysine acetylation is sufficient to block HAC12 acetylation of the H3 or H4 peptides, suggesting that HAC12 can acetylate any of several lysines present in the peptides.; histone acetyltransferase of the CBP family 12 (HAC12); FUNCTIONS IN: histone acetyltransferase activity, transcription cofactor activity; INVOLVED IN: flower development, regulation of transcription, DNA-dependent, protein amino acid acetylation; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, TAZ-type (InterPro:IPR000197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 1 (TAIR:AT1G79000.1). & (gnl|cdd|87003 : 299.0) no description available & (gnl|cdd|36989 : 290.0) no description available & (reliability: 3320.0) & (original description: Putative HAC12, Description = Histone acetyltransferase HAC12, PFAM = PF00569;PF08214;PF00628;PF02135;PF02135)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf01169_459305-484713' '(at4g37280 : 350.0) MRG family protein; FUNCTIONS IN: chromatin binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf3/MRG15 subunit (InterPro:IPR017398), MRG (InterPro:IPR008676), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: MRG family protein (TAIR:AT1G02740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69247 : 207.0) no description available & (gnl|cdd|38211 : 129.0) no description available & (reliability: 700.0) & (original description: Putative MRG1, Description = Protein MRG1, PFAM = PF05712)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf01555_122265-136620' '(at1g02740 : 249.0) MRG family protein; FUNCTIONS IN: chromatin binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf3/MRG15 subunit (InterPro:IPR017398), Tudor-like, plant (InterPro:IPR014002), MRG (InterPro:IPR008676), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: MRG family protein (TAIR:AT4G37280.1); Has 1083 Blast hits to 947 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 790; Fungi - 163; Plants - 70; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|69247 : 155.0) no description available & (gnl|cdd|38211 : 107.0) no description available & (reliability: 498.0) & (original description: Putative MRG2, Description = Protein MRG2, PFAM = PF11717;PF05712)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf01740_1133908-1204554' '(at3g54610 : 647.0) Encodes a histone acetyltransferase that is plays a role in the determination of the embryonic root-shoot axis. It is also required to regulate the floral meristem activity by modulating the extent of expression of WUS and AG. In other eukaryotes, this protein is recruited to specific promoters by DNA binding transcription factors and is thought to promote transcription by acetylating the N-terminal tail of histone H3. The enzyme has indeed been shown to catalyse primarily the acetylation of H3 histone with only traces of H4 and H2A/B being acetylated. Non-acetylated H3 peptide or an H3 peptide that had been previously acetylated on K9 both serve as excellent substrates for HAG1-catalyzed acetylation. However, prior acetylation of H3 lysine 14 blocks radioactive acetylation of the peptide by HAG1. HAG1 is specific for histone H3 lysine 14.; histone acetyltransferase of the GNAT family 1 (HAG1); FUNCTIONS IN: histone acetyltransferase activity, DNA binding, H3 histone acetyltransferase activity; INVOLVED IN: flower development, histone acetylation, response to light stimulus, positive regulation of transcription, root morphogenesis; LOCATED IN: histone acetyltransferase complex, nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Bromodomain, conserved site (InterPro:IPR018359), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: nuclear protein X1 (TAIR:AT5G63320.1); Has 13698 Blast hits to 5805 proteins in 367 species: Archae - 4; Bacteria - 1437; Metazoa - 4852; Fungi - 1484; Plants - 516; Viruses - 1; Other Eukaryotes - 5404 (source: NCBI BLink). & (gnl|cdd|36685 : 276.0) no description available & (gnl|cdd|47625 : 123.0) no description available & (reliability: 1294.0) & (original description: Putative HAG1, Description = Histone acetyltransferase GCN5, PFAM = PF00439;PF00583)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf02413_369397-387700' '(at1g32750 : 377.0) This gene is predicted to encode a histone acetyltransferase. Five lines with RNAi constructs directed against HAF1 grow normally and can produce root calli, but have defects in agrobacterium-mediated transformation.; HAF01; FUNCTIONS IN: histone acetyltransferase activity, DNA binding; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TAFII-230 TBP-binding (InterPro:IPR009067), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the TAFII250 family 2 (TAIR:AT3G19040.1); Has 22854 Blast hits to 14376 proteins in 1001 species: Archae - 24; Bacteria - 596; Metazoa - 11292; Fungi - 2677; Plants - 2799; Viruses - 159; Other Eukaryotes - 5307 (source: NCBI BLink). & (gnl|cdd|35232 : 114.0) no description available & (reliability: 754.0) & (original description: Putative GTD1, Description = Transcription initiation factor TFIID subunit 1-A, PFAM = PF12157;PF09247)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf02445_32965-51741' '(at4g37280 : 268.0) MRG family protein; FUNCTIONS IN: chromatin binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf3/MRG15 subunit (InterPro:IPR017398), MRG (InterPro:IPR008676), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: MRG family protein (TAIR:AT1G02740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69247 : 179.0) no description available & (gnl|cdd|38211 : 117.0) no description available & (reliability: 536.0) & (original description: Putative MRG1, Description = Chromatin-binding protein, PFAM = PF05712;PF11717)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf03129_154348-170112' '(at4g16420 : 488.0) Transcriptional co-activator. Essential for the developmental switch from cell proliferation to cell differentiation in response to variations in auxin and cytokinin concentrations.; homolog of yeast ADA2 2B (ADA2B); CONTAINS InterPro DOMAIN/s: SANT, eukarya (InterPro:IPR017884), SANT, DNA-binding (InterPro:IPR001005), Transcriptional adaptor 2 (InterPro:IPR016827), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SWIRM (InterPro:IPR007526), Zinc finger, ZZ-type (InterPro:IPR000433), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homolog of yeast ADA2 2A (TAIR:AT3G07740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35678 : 229.0) no description available & (gnl|cdd|34717 : 140.0) no description available & (reliability: 976.0) & (original description: Putative ADA2B, Description = Transcriptional adapter ADA2b, PFAM = PF00569;PF00249)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf05373_194822-203498' '(at5g13680 : 1370.0) A subunit of Elongator, a histone acetyl transferase complex, consisting of six subunits (ELP1ñELP6), that copurifies with the elongating RNAPII in yeast and humans. Three Arabidopsis thaliana genes, encoding homologs of the yeast Elongator subunits ELP1, ELP3 (histone acetyl transferase), and ELP4 are responsible for the narrow leaf phenotype in elongata mutants and for reduced root growth that results from a decreased cell division rate.; ABA-OVERLY SENSITIVE 1 (ABO1); CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), IKI3 (InterPro:IPR006849); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37131 : 851.0) no description available & (gnl|cdd|68339 : 690.0) no description available & (reliability: 2740.0) & (original description: Putative ELP1, Description = Elongator complex protein 1, PFAM = PF04762)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf06395_80772-86003' '(at1g03650 : 232.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 3295 Blast hits to 3295 proteins in 1287 species: Archae - 200; Bacteria - 2223; Metazoa - 217; Fungi - 220; Plants - 88; Viruses - 0; Other Eukaryotes - 347 (source: NCBI BLink). & (gnl|cdd|38349 : 122.0) no description available & (reliability: 464.0) & (original description: Putative At1g03650, Description = Acyl-CoA N-acyltransferases-like protein, PFAM = PF00583)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf08519_86553-93040' '(at1g79000 : 560.0) Homologous to CREB-binding protein, a co-activator of transcription with histone acetyl-transferase activity. No single prior lysine acetylation is sufficient to block HAC1 acetylation of the H3 or H4 peptides, suggesting that HAC1, HAC5, and HAC12 can acetylate any of several lysines present in the peptides. HAM2 acetylates histone H4 lysine 5. A plant line expressing an RNAi construct targeted against HAC1 has reduced rates of agrobacterium-mediated root transformation.; histone acetyltransferase of the CBP family 1 (HAC1); FUNCTIONS IN: histone acetyltransferase activity, transcription cofactor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, TAZ-type (InterPro:IPR000197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 12 (TAIR:AT1G16710.1). & (gnl|cdd|87003 : 269.0) no description available & (reliability: 1120.0) & (original description: Putative nej, Description = CREB-binding protein, PFAM = PF08214)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf09100_226805-242926' '(at4g16420 : 305.0) Transcriptional co-activator. Essential for the developmental switch from cell proliferation to cell differentiation in response to variations in auxin and cytokinin concentrations.; homolog of yeast ADA2 2B (ADA2B); CONTAINS InterPro DOMAIN/s: SANT, eukarya (InterPro:IPR017884), SANT, DNA-binding (InterPro:IPR001005), Transcriptional adaptor 2 (InterPro:IPR016827), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SWIRM (InterPro:IPR007526), Zinc finger, ZZ-type (InterPro:IPR000433), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homolog of yeast ADA2 2A (TAIR:AT3G07740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35678 : 221.0) no description available & (gnl|cdd|34717 : 148.0) no description available & (reliability: 610.0) & (original description: Putative ADA2B, Description = Transcriptional adapter ADA2b, PFAM = PF00249;PF00569)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf09485_11464-30028' '(at1g79000 : 1625.0) Homologous to CREB-binding protein, a co-activator of transcription with histone acetyl-transferase activity. No single prior lysine acetylation is sufficient to block HAC1 acetylation of the H3 or H4 peptides, suggesting that HAC1, HAC5, and HAC12 can acetylate any of several lysines present in the peptides. HAM2 acetylates histone H4 lysine 5. A plant line expressing an RNAi construct targeted against HAC1 has reduced rates of agrobacterium-mediated root transformation.; histone acetyltransferase of the CBP family 1 (HAC1); FUNCTIONS IN: histone acetyltransferase activity, transcription cofactor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, TAZ-type (InterPro:IPR000197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 12 (TAIR:AT1G16710.1). & (gnl|cdd|87003 : 302.0) no description available & (gnl|cdd|36989 : 287.0) no description available & (reliability: 3250.0) & (original description: Putative HAC12, Description = Histone acetyltransferase HAC12, PFAM = PF00628;PF08214;PF00569;PF02135;PF02135)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf11232_62482-74831' '(at1g79000 : 773.0) Homologous to CREB-binding protein, a co-activator of transcription with histone acetyl-transferase activity. No single prior lysine acetylation is sufficient to block HAC1 acetylation of the H3 or H4 peptides, suggesting that HAC1, HAC5, and HAC12 can acetylate any of several lysines present in the peptides. HAM2 acetylates histone H4 lysine 5. A plant line expressing an RNAi construct targeted against HAC1 has reduced rates of agrobacterium-mediated root transformation.; histone acetyltransferase of the CBP family 1 (HAC1); FUNCTIONS IN: histone acetyltransferase activity, transcription cofactor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, TAZ-type (InterPro:IPR000197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 12 (TAIR:AT1G16710.1). & (gnl|cdd|87003 : 291.0) no description available & (gnl|cdd|36989 : 133.0) no description available & (reliability: 1546.0) & (original description: Putative HAC1, Description = Histone acetyltransferase HAC1, PFAM = PF08214;PF02135)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf21557_99440-105527' '(at5g50320 : 1035.0) A subunit of Elongator, a histone acetyl transferase complex, consisting of six subunits (ELP1ñELP6), that copurifies with the elongating RNAPII in yeast and humans. Three Arabidopsis thaliana genes, encoding homologs of the yeast Elongator subunits ELP1, ELP3 (histone acetyl transferase), and ELP4 are responsible for the narrow leaf phenotype in elongata mutants and for reduced root growth that results from a decreased cell division rate. Two lines with RNAi constructs directed against HAG3 grow normally and can produce root calli, but have defects in agrobacterium-mediated transformation.; ELONGATA 3 (ELO3); CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Histone acetyltransferase ELP3 (InterPro:IPR005910), Radical SAM (InterPro:IPR007197), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7x7l3|elp3_orysa : 1014.0) Probable histone acetyltransferase ELP3 (EC 2.3.1.48) (Elongator component 3) (Elongation protein 3) - Oryza sativa (Rice) & (gnl|cdd|37746 : 1012.0) no description available & (gnl|cdd|31436 : 662.0) no description available & (reliability: 2070.0) & (original description: Putative HAG3, Description = Elongator complex protein 3, PFAM = PF00583;PF04055;PF16199)' T '27.3.54' 'RNA.regulation of transcription.Histone acetyltransferases' 'niben101scf25141_8400-25951' '(at5g64610 : 754.0) Encodes an enzyme with histone acetyltransferase activity. HAM1 primarily acetylate histone H4, but also display some ability to acetylate H3. Prior acetylation of lysine 5 on histone H4 reduces radioactive acetylation by either HAM1. HAM1 acetylates histone H4 lysine 5.; histone acetyltransferase of the MYST family 1 (HAM1); FUNCTIONS IN: histone acetyltransferase activity, zinc ion binding, nucleic acid binding; INVOLVED IN: chromatin assembly or disassembly, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Chromo domain (InterPro:IPR000953), MOZ/SAS-like protein (InterPro:IPR002717); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the MYST family 2 (TAIR:AT5G09740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8li34|myst1_orysa : 713.0) Putative MYST-like histone acetyltransferase 1 (EC 2.3.1.48) - Oryza sativa (Rice) & (gnl|cdd|37958 : 430.0) no description available & (gnl|cdd|34632 : 355.0) no description available & (reliability: 1508.0) & (original description: Putative HAM1, Description = Histone acetyltransferase of the MYST family 1, PFAM = PF01853;PF11717)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'nbv0.3scaffold5468_17464-31923' '(at4g33470 : 581.0) Encodes HDA14, a member of the histone deacetylase family proteins.; histone deacetylase 14 (hda14); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: histone deacetylation; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 5 (TAIR:AT5G61060.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30472 : 260.0) no description available & (gnl|cdd|36557 : 251.0) no description available & (p56521|hdac_maize : 82.4) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (reliability: 1162.0) & (original description: Putative HDA14, Description = Histone deacetylase 14, PFAM = PF00850)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'nbv0.3scaffold14154_1717-10473' '(at5g26040 : 541.0) Class III RPD3 type protein. Encodes HDA2, a member of the histone deacetylase family proteins.; histone deacetylase 2 (HDA2); CONTAINS InterPro DOMAIN/s: Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 6 (TAIR:AT5G63110.1); Has 8459 Blast hits to 8281 proteins in 1419 species: Archae - 213; Bacteria - 3093; Metazoa - 1435; Fungi - 484; Plants - 429; Viruses - 0; Other Eukaryotes - 2805 (source: NCBI BLink). & (gnl|cdd|36558 : 481.0) no description available & (gnl|cdd|30472 : 166.0) no description available & (reliability: 1082.0) & (original description: Putative HDA2, Description = Histone deacetylase 2, PFAM = PF00850)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'nbv0.3scaffold25163_19698-28782' '(at5g55760 : 418.0) Encodes SRT1, a member of the SIR2 (sirtuin) family HDAC (histone deacetylase) (SRT1/AT5g55760, SRT2/AT5G09230).; sirtuin 1 (SRT1); FUNCTIONS IN: NAD binding, DNA binding, zinc ion binding, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: protein amino acid deacetylation, chromatin silencing, regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: chromatin silencing complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent histone deacetylase, silent information regulator Sir2 (InterPro:IPR003000); BEST Arabidopsis thaliana protein match is: sirtuin 2 (TAIR:AT5G09230.7); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37116 : 209.0) no description available & (gnl|cdd|29378 : 184.0) no description available & (reliability: 836.0) & (original description: Putative sirt6, Description = NAD-dependent deacetylase sirtuin-6, PFAM = PF02146)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'nbv0.3scaffold29615_3353-9030' '(at3g44750 : 122.0) Encodes a histone deacetylase. Controls the development of adaxial/abaxial leaf polarity. Two lines with RNAi-directed against this gene show reduced Agrobacterium-mediated DNA transformation of the roots.; histone deacetylase 3 (HDA3); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087), Nucleoplasmin (InterPro:IPR004301); BEST Arabidopsis thaliana protein match is: histone deacetylase 2B (TAIR:AT5G22650.1). & (q9m4u5|hd2b_maize : 92.0) Histone deacetylase 2b (HD2b) (Zm-HD2b) - Zea mays (Maize) & (reliability: 244.0) & (original description: Putative HDT3, Description = Histone deacetylase HDT3, PFAM = PF13912)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'nbv0.5scaffold46_645173-659636' '(at4g33470 : 582.0) Encodes HDA14, a member of the histone deacetylase family proteins.; histone deacetylase 14 (hda14); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: histone deacetylation; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 5 (TAIR:AT5G61060.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30472 : 259.0) no description available & (gnl|cdd|36557 : 246.0) no description available & (p56521|hdac_maize : 82.4) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (reliability: 1164.0) & (original description: Putative HDA14, Description = Histone deacetylase 14, PFAM = PF00850)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'nbv0.5scaffold868_470688-478672' '(at4g38130 : 816.0) Encodes a histone deacetylase that enhances AtERF7-mediated transcriptional repression. Binds SIM3 and ERF7. Expressed in the nucleus in most tissues examined and throughout the life of the plant. Involved in jasmonic acid and ethylene dependent pathogen resistance. The sequence in GenBank has 17 AG dinucleotide repeats missing, which is also missing in Ler shotgun sequence from Cereon. Although it is annotated to be in Columbia, the GB sequence is probably not of Columbia origin. Plays a role in embryogenesis as mutants grown at higher temperatures display abnormalities in the organization of the root and shoot. Plant lines expressing an RNAi construct targeted against HDA19 shows some resistance to agrobacterium-mediated root transformation.; histone deacetylase 1 (HD1); CONTAINS InterPro DOMAIN/s: Histone deacetylase (InterPro:IPR003084), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 6 (TAIR:AT5G63110.1); Has 8759 Blast hits to 8549 proteins in 1452 species: Archae - 219; Bacteria - 3192; Metazoa - 1525; Fungi - 536; Plants - 478; Viruses - 0; Other Eukaryotes - 2809 (source: NCBI BLink). & (p56521|hdac_maize : 721.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (gnl|cdd|36556 : 692.0) no description available & (gnl|cdd|85068 : 442.0) no description available & (reliability: 1632.0) & (original description: Putative HDA19, Description = Histone deacetylase 19, PFAM = PF00850)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'nbv0.5scaffold3129_67179-80452' '(at5g63110 : 714.0) RPD3-like histone deacetylase. HDA6 mutations specifically increase the expression of auxin-responsive transgenes, suggesting a role in transgene silencing.; histone deacetylase 6 (HDA6); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: response to salt stress, gene silencing, posttranscriptional gene silencing, response to abscisic acid stimulus, histone deacetylation; LOCATED IN: nucleus, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase (InterPro:IPR003084), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 1 (TAIR:AT4G38130.1); Has 8759 Blast hits to 8549 proteins in 1444 species: Archae - 221; Bacteria - 3162; Metazoa - 1525; Fungi - 546; Plants - 480; Viruses - 0; Other Eukaryotes - 2825 (source: NCBI BLink). & (gnl|cdd|36556 : 661.0) no description available & (p56521|hdac_maize : 558.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (gnl|cdd|85068 : 398.0) no description available & (reliability: 1428.0) & (original description: Putative HDA6, Description = Histone deacetylase 6, PFAM = PF00850)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'nbv0.5scaffold4555_149230-164573' '(at5g55760 : 546.0) Encodes SRT1, a member of the SIR2 (sirtuin) family HDAC (histone deacetylase) (SRT1/AT5g55760, SRT2/AT5G09230).; sirtuin 1 (SRT1); FUNCTIONS IN: NAD binding, DNA binding, zinc ion binding, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: protein amino acid deacetylation, chromatin silencing, regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: chromatin silencing complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent histone deacetylase, silent information regulator Sir2 (InterPro:IPR003000); BEST Arabidopsis thaliana protein match is: sirtuin 2 (TAIR:AT5G09230.7); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37116 : 305.0) no description available & (gnl|cdd|29378 : 244.0) no description available & (reliability: 1092.0) & (original description: Putative SRT1, Description = NAD-dependent protein deacetylase SRT1, PFAM = PF02146;PF02146)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'niben044scf00011069ctg008_349-5153' '(at3g44750 : 108.0) Encodes a histone deacetylase. Controls the development of adaxial/abaxial leaf polarity. Two lines with RNAi-directed against this gene show reduced Agrobacterium-mediated DNA transformation of the roots.; histone deacetylase 3 (HDA3); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087), Nucleoplasmin (InterPro:IPR004301); BEST Arabidopsis thaliana protein match is: histone deacetylase 2B (TAIR:AT5G22650.1). & (q9m4u5|hd2b_maize : 84.7) Histone deacetylase 2b (HD2b) (Zm-HD2b) - Zea mays (Maize) & (reliability: 216.0) & (original description: Putative HD2, Description = Histone deacetylase 2a, PFAM = )' T '27.3.55' 'RNA.regulation of transcription.HDA' 'niben044scf00016998ctg011_16616-22293' '(at3g44750 : 123.0) Encodes a histone deacetylase. Controls the development of adaxial/abaxial leaf polarity. Two lines with RNAi-directed against this gene show reduced Agrobacterium-mediated DNA transformation of the roots.; histone deacetylase 3 (HDA3); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087), Nucleoplasmin (InterPro:IPR004301); BEST Arabidopsis thaliana protein match is: histone deacetylase 2B (TAIR:AT5G22650.1). & (q9m4u5|hd2b_maize : 94.7) Histone deacetylase 2b (HD2b) (Zm-HD2b) - Zea mays (Maize) & (reliability: 246.0) & (original description: Putative HD2c, Description = Type 2 histone deacetylase c, PFAM = PF13912)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'niben044scf00044656ctg003_1-8743' '(gnl|cdd|35494 : 219.0) no description available & (at5g67320 : 163.0) Encodes a WD-40 protein involved in histone deacetylation in response to abiotic stress.Identified in a screen for mutations with altered expression of stress induced genes. Functions as a repressor of cold tolerance induced genes. Loss of function mutants are hypersensitive to freezing.; high expression of osmotically responsive genes 15 (HOS15); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative ebi, Description = F-box-like/WD repeat-containing protein ebi, PFAM = PF08513;PF00400;PF00400)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'niben044scf00045887ctg002_3220-13314' '(at5g61060 : 108.0) Encodes a member of the histone deacetylase family.; histone deacetylase 5 (HDA05); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: histone deacetylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase of the RPD3/HDA1 superfamily 18 (TAIR:AT5G61070.1). & (reliability: 216.0) & (original description: Putative HDA5, Description = Histone deacetylase 5, PFAM = )' T '27.3.55' 'RNA.regulation of transcription.HDA' 'niben044scf00058646ctg003_10741-15853' '(at5g55760 : 177.0) Encodes SRT1, a member of the SIR2 (sirtuin) family HDAC (histone deacetylase) (SRT1/AT5g55760, SRT2/AT5G09230).; sirtuin 1 (SRT1); FUNCTIONS IN: NAD binding, DNA binding, zinc ion binding, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: protein amino acid deacetylation, chromatin silencing, regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: chromatin silencing complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent histone deacetylase, silent information regulator Sir2 (InterPro:IPR003000); BEST Arabidopsis thaliana protein match is: sirtuin 2 (TAIR:AT5G09230.7); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative SRT1, Description = NAD-dependent deacetylase sirtuin-6, PFAM = )' T '27.3.55' 'RNA.regulation of transcription.HDA' 'niben044scf00059821ctg000_1-12324' '(at3g18520 : 636.0) Encodes a protein with similarity to histone deacetylases. Plants expressing RNAi directed against this gene show a moderate resistance to agrobacterium-mediated root transformation.; histone deacetylase 15 (HDA15); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: DNA mediated transformation, histone deacetylation; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 5 (TAIR:AT5G61060.1); Has 9308 Blast hits to 9105 proteins in 1476 species: Archae - 223; Bacteria - 3234; Metazoa - 1500; Fungi - 655; Plants - 551; Viruses - 0; Other Eukaryotes - 3145 (source: NCBI BLink). & (gnl|cdd|30472 : 286.0) no description available & (gnl|cdd|36557 : 282.0) no description available & (p56521|hdac_maize : 84.7) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (reliability: 1272.0) & (original description: Putative HDA15, Description = Histone deacetylase 15, PFAM = PF00850)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf00546_821290-835669' '(at1g08460 : 551.0) histone deacetylase 8 (HDA08); CONTAINS InterPro DOMAIN/s: Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 5 (TAIR:AT5G61060.1); Has 9025 Blast hits to 8820 proteins in 1442 species: Archae - 223; Bacteria - 3178; Metazoa - 1474; Fungi - 641; Plants - 477; Viruses - 0; Other Eukaryotes - 3032 (source: NCBI BLink). & (gnl|cdd|30472 : 255.0) no description available & (gnl|cdd|36557 : 239.0) no description available & (p56521|hdac_maize : 97.8) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (reliability: 1102.0) & (original description: Putative HDA8, Description = Histone deacetylase 8, PFAM = PF00850)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf00949_146771-151340' '(at3g44750 : 108.0) Encodes a histone deacetylase. Controls the development of adaxial/abaxial leaf polarity. Two lines with RNAi-directed against this gene show reduced Agrobacterium-mediated DNA transformation of the roots.; histone deacetylase 3 (HDA3); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087), Nucleoplasmin (InterPro:IPR004301); BEST Arabidopsis thaliana protein match is: histone deacetylase 2B (TAIR:AT5G22650.1). & (q9m4u5|hd2b_maize : 84.7) Histone deacetylase 2b (HD2b) (Zm-HD2b) - Zea mays (Maize) & (reliability: 216.0) & (original description: Putative HDT1, Description = Histone deacetylase HDT1, PFAM = )' T '27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf02207_106091-117982' '(at5g63110 : 724.0) RPD3-like histone deacetylase. HDA6 mutations specifically increase the expression of auxin-responsive transgenes, suggesting a role in transgene silencing.; histone deacetylase 6 (HDA6); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: response to salt stress, gene silencing, posttranscriptional gene silencing, response to abscisic acid stimulus, histone deacetylation; LOCATED IN: nucleus, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase (InterPro:IPR003084), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 1 (TAIR:AT4G38130.1); Has 8759 Blast hits to 8549 proteins in 1444 species: Archae - 221; Bacteria - 3162; Metazoa - 1525; Fungi - 546; Plants - 480; Viruses - 0; Other Eukaryotes - 2825 (source: NCBI BLink). & (gnl|cdd|36556 : 666.0) no description available & (p56521|hdac_maize : 560.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (gnl|cdd|85068 : 397.0) no description available & (reliability: 1448.0) & (original description: Putative HDA6, Description = Histone deacetylase 6, PFAM = PF00850)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf02786_13477-27787' '(at3g18520 : 638.0) Encodes a protein with similarity to histone deacetylases. Plants expressing RNAi directed against this gene show a moderate resistance to agrobacterium-mediated root transformation.; histone deacetylase 15 (HDA15); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: DNA mediated transformation, histone deacetylation; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 5 (TAIR:AT5G61060.1); Has 9308 Blast hits to 9105 proteins in 1476 species: Archae - 223; Bacteria - 3234; Metazoa - 1500; Fungi - 655; Plants - 551; Viruses - 0; Other Eukaryotes - 3145 (source: NCBI BLink). & (gnl|cdd|30472 : 289.0) no description available & (gnl|cdd|36557 : 286.0) no description available & (p56521|hdac_maize : 84.7) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (reliability: 1276.0) & (original description: Putative HDA15, Description = Histone deacetylase 15, PFAM = PF00850)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf03077_4795-18699' '(gnl|cdd|35494 : 586.0) no description available & (at5g67320 : 554.0) Encodes a WD-40 protein involved in histone deacetylation in response to abiotic stress.Identified in a screen for mutations with altered expression of stress induced genes. Functions as a repressor of cold tolerance induced genes. Loss of function mutants are hypersensitive to freezing.; high expression of osmotically responsive genes 15 (HOS15); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29257 : 245.0) no description available & (p93107|pf20_chlre : 117.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1108.0) & (original description: Putative ebi, Description = F-box-like/WD repeat-containing protein TBL1XR1, PFAM = PF08513;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf03839_197727-206483' '(at5g26040 : 492.0) Class III RPD3 type protein. Encodes HDA2, a member of the histone deacetylase family proteins.; histone deacetylase 2 (HDA2); CONTAINS InterPro DOMAIN/s: Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 6 (TAIR:AT5G63110.1); Has 8459 Blast hits to 8281 proteins in 1419 species: Archae - 213; Bacteria - 3093; Metazoa - 1435; Fungi - 484; Plants - 429; Viruses - 0; Other Eukaryotes - 2805 (source: NCBI BLink). & (gnl|cdd|36558 : 437.0) no description available & (gnl|cdd|30472 : 164.0) no description available & (reliability: 984.0) & (original description: Putative HDA2, Description = Histone deacetylase 2, PFAM = PF00850)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf04260_103326-113957' '(at5g03740 : 159.0) HD2-type histone deacetylase HDAC. Involved in the ABA and stress responses. Mediates transcriptional repression; histone deacetylase 2C (HD2C); FUNCTIONS IN: histone deacetylase activity, transcription repressor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to water deprivation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: nucleolus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: histone deacetylase 3 (TAIR:AT3G44750.2); Has 47549 Blast hits to 20091 proteins in 1212 species: Archae - 111; Bacteria - 17827; Metazoa - 12467; Fungi - 4889; Plants - 1882; Viruses - 518; Other Eukaryotes - 9855 (source: NCBI BLink). & (q8ljs2|hd2a_soybn : 149.0) Histone deacetylase 2a (HD2a) (Nucleolar histone deacetylase HD2-p39) - Glycine max (Soybean) & (reliability: 318.0) & (original description: Putative HD2c, Description = Type 2 histone deacetylase c, PFAM = PF13912)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf04854_234361-254148' '(gnl|cdd|35494 : 592.0) no description available & (at5g67320 : 561.0) Encodes a WD-40 protein involved in histone deacetylation in response to abiotic stress.Identified in a screen for mutations with altered expression of stress induced genes. Functions as a repressor of cold tolerance induced genes. Loss of function mutants are hypersensitive to freezing.; high expression of osmotically responsive genes 15 (HOS15); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29257 : 241.0) no description available & (p93107|pf20_chlre : 114.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1122.0) & (original description: Putative ebi, Description = F-box-like/WD repeat-containing protein TBL1XR1, PFAM = PF08513;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf04995_925385-947965' '(gnl|cdd|35494 : 457.0) no description available & (at5g67320 : 445.0) Encodes a WD-40 protein involved in histone deacetylation in response to abiotic stress.Identified in a screen for mutations with altered expression of stress induced genes. Functions as a repressor of cold tolerance induced genes. Loss of function mutants are hypersensitive to freezing.; high expression of osmotically responsive genes 15 (HOS15); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29257 : 187.0) no description available & (p93107|pf20_chlre : 100.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 890.0) & (original description: Putative ebi, Description = F-box-like/WD repeat-containing protein TBL1XR1, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF08513)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf06769_498440-504886' '(q9m4u5|hd2b_maize : 159.0) Histone deacetylase 2b (HD2b) (Zm-HD2b) - Zea mays (Maize) & (at5g03740 : 150.0) HD2-type histone deacetylase HDAC. Involved in the ABA and stress responses. Mediates transcriptional repression; histone deacetylase 2C (HD2C); FUNCTIONS IN: histone deacetylase activity, transcription repressor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to water deprivation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: nucleolus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: histone deacetylase 3 (TAIR:AT3G44750.2); Has 47549 Blast hits to 20091 proteins in 1212 species: Archae - 111; Bacteria - 17827; Metazoa - 12467; Fungi - 4889; Plants - 1882; Viruses - 518; Other Eukaryotes - 9855 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative HDT1, Description = Histone deacetylase HDT1, PFAM = PF13912)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf07147_27439-43071' '(at5g55760 : 669.0) Encodes SRT1, a member of the SIR2 (sirtuin) family HDAC (histone deacetylase) (SRT1/AT5g55760, SRT2/AT5G09230).; sirtuin 1 (SRT1); FUNCTIONS IN: NAD binding, DNA binding, zinc ion binding, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: protein amino acid deacetylation, chromatin silencing, regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: chromatin silencing complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent histone deacetylase, silent information regulator Sir2 (InterPro:IPR003000); BEST Arabidopsis thaliana protein match is: sirtuin 2 (TAIR:AT5G09230.7); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37116 : 403.0) no description available & (gnl|cdd|29378 : 327.0) no description available & (reliability: 1338.0) & (original description: Putative SRT1, Description = NAD-dependent protein deacetylase SRT1, PFAM = PF02146)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf07793_349152-358171' '(gnl|cdd|36556 : 568.0) no description available & (at5g63110 : 562.0) RPD3-like histone deacetylase. HDA6 mutations specifically increase the expression of auxin-responsive transgenes, suggesting a role in transgene silencing.; histone deacetylase 6 (HDA6); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: response to salt stress, gene silencing, posttranscriptional gene silencing, response to abscisic acid stimulus, histone deacetylation; LOCATED IN: nucleus, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase (InterPro:IPR003084), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 1 (TAIR:AT4G38130.1); Has 8759 Blast hits to 8549 proteins in 1444 species: Archae - 221; Bacteria - 3162; Metazoa - 1525; Fungi - 546; Plants - 480; Viruses - 0; Other Eukaryotes - 2825 (source: NCBI BLink). & (p56521|hdac_maize : 426.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (gnl|cdd|85068 : 343.0) no description available & (reliability: 1124.0) & (original description: Putative HDA6, Description = Histone deacetylase 6, PFAM = PF00850)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf07793_375760-380732' '(at5g63110 : 668.0) RPD3-like histone deacetylase. HDA6 mutations specifically increase the expression of auxin-responsive transgenes, suggesting a role in transgene silencing.; histone deacetylase 6 (HDA6); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: response to salt stress, gene silencing, posttranscriptional gene silencing, response to abscisic acid stimulus, histone deacetylation; LOCATED IN: nucleus, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase (InterPro:IPR003084), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 1 (TAIR:AT4G38130.1); Has 8759 Blast hits to 8549 proteins in 1444 species: Archae - 221; Bacteria - 3162; Metazoa - 1525; Fungi - 546; Plants - 480; Viruses - 0; Other Eukaryotes - 2825 (source: NCBI BLink). & (gnl|cdd|36556 : 653.0) no description available & (p56521|hdac_maize : 517.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (gnl|cdd|85068 : 397.0) no description available & (reliability: 1336.0) & (original description: Putative HDA6, Description = Histone deacetylase 6, PFAM = PF00850)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf08836_175550-193516' '(at5g55760 : 587.0) Encodes SRT1, a member of the SIR2 (sirtuin) family HDAC (histone deacetylase) (SRT1/AT5g55760, SRT2/AT5G09230).; sirtuin 1 (SRT1); FUNCTIONS IN: NAD binding, DNA binding, zinc ion binding, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: protein amino acid deacetylation, chromatin silencing, regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: chromatin silencing complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent histone deacetylase, silent information regulator Sir2 (InterPro:IPR003000); BEST Arabidopsis thaliana protein match is: sirtuin 2 (TAIR:AT5G09230.7); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37116 : 340.0) no description available & (gnl|cdd|29378 : 264.0) no description available & (reliability: 1174.0) & (original description: Putative SRT1, Description = NAD-dependent protein deacetylase SRT1, PFAM = PF02146;PF02146)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf09416_578950-583642' '(at3g44750 : 106.0) Encodes a histone deacetylase. Controls the development of adaxial/abaxial leaf polarity. Two lines with RNAi-directed against this gene show reduced Agrobacterium-mediated DNA transformation of the roots.; histone deacetylase 3 (HDA3); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087), Nucleoplasmin (InterPro:IPR004301); BEST Arabidopsis thaliana protein match is: histone deacetylase 2B (TAIR:AT5G22650.1). & (o24591|hd2a_maize : 85.5) Histone deacetylase 2a (HD2a) (Zm-HD2a) (Nucleolar histone deacetylase HD2-p39) - Zea mays (Maize) & (reliability: 212.0) & (original description: Putative HDT1, Description = Histone deacetylase HDT1, PFAM = )' T '27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf10863_6429-14525' '(at4g38130 : 816.0) Encodes a histone deacetylase that enhances AtERF7-mediated transcriptional repression. Binds SIM3 and ERF7. Expressed in the nucleus in most tissues examined and throughout the life of the plant. Involved in jasmonic acid and ethylene dependent pathogen resistance. The sequence in GenBank has 17 AG dinucleotide repeats missing, which is also missing in Ler shotgun sequence from Cereon. Although it is annotated to be in Columbia, the GB sequence is probably not of Columbia origin. Plays a role in embryogenesis as mutants grown at higher temperatures display abnormalities in the organization of the root and shoot. Plant lines expressing an RNAi construct targeted against HDA19 shows some resistance to agrobacterium-mediated root transformation.; histone deacetylase 1 (HD1); CONTAINS InterPro DOMAIN/s: Histone deacetylase (InterPro:IPR003084), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 6 (TAIR:AT5G63110.1); Has 8759 Blast hits to 8549 proteins in 1452 species: Archae - 219; Bacteria - 3192; Metazoa - 1525; Fungi - 536; Plants - 478; Viruses - 0; Other Eukaryotes - 2809 (source: NCBI BLink). & (p56521|hdac_maize : 720.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (gnl|cdd|36556 : 690.0) no description available & (gnl|cdd|85068 : 442.0) no description available & (reliability: 1632.0) & (original description: Putative HDAC2, Description = Histone deacetylase 2, PFAM = PF00850)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf11778_151786-161060' '(at3g44680 : 794.0) Class I RPD3 type protein; histone deacetylase 9 (HDA9); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: histone deacetylation; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase (InterPro:IPR003084), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 1 (TAIR:AT4G38130.1); Has 8723 Blast hits to 8511 proteins in 1453 species: Archae - 219; Bacteria - 3191; Metazoa - 1512; Fungi - 548; Plants - 472; Viruses - 0; Other Eukaryotes - 2781 (source: NCBI BLink). & (gnl|cdd|36556 : 676.0) no description available & (p56521|hdac_maize : 466.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (gnl|cdd|85068 : 389.0) no description available & (reliability: 1588.0) & (original description: Putative HDA9, Description = Histone deacetylase 9, PFAM = PF00850)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf15435_9397-19734' '(at5g09230 : 520.0) Encodes SRT2, a member of the SIR2 (sirtuin) family HDAC (histone deacetylase) (SRT1/AT5g55760, SRT2/AT5G09230).; sirtuin 2 (SRT2); FUNCTIONS IN: NAD binding, DNA binding, zinc ion binding, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: chromatin silencing, defense response to bacterium, negative regulation of defense response, regulation of transcription, DNA-dependent; LOCATED IN: chromatin silencing complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent histone deacetylase, silent information regulator Sir2 (InterPro:IPR003000); BEST Arabidopsis thaliana protein match is: sirtuin 1 (TAIR:AT5G55760.1); Has 6471 Blast hits to 6454 proteins in 2013 species: Archae - 152; Bacteria - 3779; Metazoa - 822; Fungi - 681; Plants - 106; Viruses - 0; Other Eukaryotes - 931 (source: NCBI BLink). & (gnl|cdd|37894 : 400.0) no description available & (gnl|cdd|29377 : 371.0) no description available & (reliability: 1040.0) & (original description: Putative SRT2, Description = NAD-dependent protein deacylase SRT2, PFAM = PF02146)' T '27.3.55' 'RNA.regulation of transcription.HDA' 'niben101scf15972_190191-203903' '(at5g61060 : 857.0) Encodes a member of the histone deacetylase family.; histone deacetylase 5 (HDA05); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: histone deacetylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase of the RPD3/HDA1 superfamily 18 (TAIR:AT5G61070.1). & (gnl|cdd|85068 : 296.0) no description available & (gnl|cdd|36557 : 265.0) no description available & (p56521|hdac_maize : 106.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (reliability: 1714.0) & (original description: Putative HDA5, Description = Histone deacetylase 5, PFAM = PF00850)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'nbv0.3scaffold2030_1-6498' '(gnl|cdd|36570 : 183.0) no description available & (at1g11950 : 174.0) Transcription factor jumonji (jmjC) domain-containing protein; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G62310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative IBM1, Description = Lysine-specific demethylase 3B, PFAM = PF02373)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'nbv0.3scaffold6529_38720-57053' '(at5g04240 : 748.0) Early Flowering 6 (ELF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a repressor in the photoperiod pathway. ELF6 interacts with BES1 in a Y2H assay, in vitro, and in Arabidosis protoplasts (based on BiFC). ELF6 may play a role in brassinosteroid signaling by affecting histone methylation in the promoters of BR-responsive genes.; EARLY FLOWERING 6 (ELF6); CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C2H2-like (InterPro:IPR015880), Transcription factor jumonji (InterPro:IPR013129), Zinc finger, C2H2-type (InterPro:IPR007087), Transcription factor jumonji, JmjN (InterPro:IPR003349), Zinc finger, C2H2-type/integrase, DNA-binding (InterPro:IPR013087); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 112631 Blast hits to 36360 proteins in 1127 species: Archae - 0; Bacteria - 99; Metazoa - 105700; Fungi - 2573; Plants - 699; Viruses - 11; Other Eukaryotes - 3549 (source: NCBI BLink). & (gnl|cdd|36460 : 245.0) no description available & (gnl|cdd|66093 : 138.0) no description available & (reliability: 1496.0) & (original description: Putative ELF6, Description = Lysine-specific demethylase REF6, PFAM = PF02375;PF02373)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'nbv0.3scaffold12363_1286-6359' '(at5g06550 : 712.0) CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), F-box domain, Skp2-like (InterPro:IPR022364), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: transferases, transferring glycosyl groups (TAIR:AT1G78280.1); Has 1762 Blast hits to 1747 proteins in 292 species: Archae - 0; Bacteria - 297; Metazoa - 877; Fungi - 168; Plants - 221; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink). & (gnl|cdd|37341 : 382.0) no description available & (reliability: 1424.0) & (original description: Putative psr, Description = Bifunctional arginine demethylase and lysyl-hydroxylase PSR, PFAM = PF13621;PF00646)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'nbv0.3scaffold37682_9839-20576' '(at1g78280 : 686.0) transferases, transferring glycosyl groups; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Transcription factor jumonji (InterPro:IPR013129), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06550.1); Has 1510 Blast hits to 1497 proteins in 307 species: Archae - 0; Bacteria - 312; Metazoa - 658; Fungi - 137; Plants - 199; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink). & (gnl|cdd|37341 : 424.0) no description available & (reliability: 1372.0) & (original description: Putative psr, Description = Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6, PFAM = PF12937;PF13621)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'nbv0.5scaffold1792_302168-320289' '(at1g78280 : 1107.0) transferases, transferring glycosyl groups; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Transcription factor jumonji (InterPro:IPR013129), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06550.1); Has 1510 Blast hits to 1497 proteins in 307 species: Archae - 0; Bacteria - 312; Metazoa - 658; Fungi - 137; Plants - 199; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink). & (gnl|cdd|37341 : 424.0) no description available & (reliability: 2214.0) & (original description: Putative psr, Description = Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6, PFAM = PF13621;PF00646)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'nbv0.5scaffold1792_304361-320334' '(at1g78280 : 958.0) transferases, transferring glycosyl groups; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Transcription factor jumonji (InterPro:IPR013129), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06550.1); Has 1510 Blast hits to 1497 proteins in 307 species: Archae - 0; Bacteria - 312; Metazoa - 658; Fungi - 137; Plants - 199; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink). & (gnl|cdd|37341 : 430.0) no description available & (reliability: 1916.0) & (original description: Putative psr, Description = Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6, PFAM = PF00646;PF13621)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'nbv0.5scaffold3211_343708-352626' '(at1g30810 : 722.0) Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), FY-rich, C-terminal (InterPro:IPR003889), FY-rich, N-terminal (InterPro:IPR003888), Transcription factor jumonji, JmjN (InterPro:IPR003349), Zinc finger, C5HC2-type (InterPro:IPR004198), FY-rich, C-terminal subgroup (InterPro:IPR018516), Transcription factor jumonji (InterPro:IPR013129), FY-rich, N-terminal subgroup (InterPro:IPR018518); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (TAIR:AT2G34880.1). & (gnl|cdd|36460 : 464.0) no description available & (gnl|cdd|66093 : 165.0) no description available & (reliability: 1444.0) & (original description: Putative lid, Description = Lysine-specific demethylase 5B, PFAM = PF05965;PF02373;PF02375;PF02928;PF05964)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'nbv0.5scaffold4667_33535-53813' '(at1g63490 : 859.0) transcription factor jumonji (jmjC) domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), PLU-1-like (InterPro:IPR013637), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (TAIR:AT1G08620.2); Has 2288 Blast hits to 1952 proteins in 202 species: Archae - 0; Bacteria - 15; Metazoa - 1333; Fungi - 459; Plants - 289; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (gnl|cdd|36460 : 354.0) no description available & (gnl|cdd|66093 : 160.0) no description available & (reliability: 1718.0) & (original description: Putative lid, Description = Lysine-specific demethylase 5B, PFAM = PF01388;PF08429;PF08429;PF02928;PF02373;PF02375;PF00628)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'nbv0.5scaffold6056_73031-81583' '(at5g46910 : 811.0) Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Transcription factor jumonji, JmjN (InterPro:IPR003349); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36460 : 279.0) no description available & (gnl|cdd|66093 : 144.0) no description available & (reliability: 1622.0) & (original description: Putative JMJ706, Description = Lysine-specific demethylase JMJ706, PFAM = PF02928;PF02373;PF02375)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben044scf00010225ctg008_420-6958' '(at5g46910 : 829.0) Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Transcription factor jumonji, JmjN (InterPro:IPR003349); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36460 : 280.0) no description available & (gnl|cdd|66093 : 144.0) no description available & (reliability: 1658.0) & (original description: Putative ELF6, Description = Lysine-specific demethylase REF6, PFAM = PF02373;PF02928;PF02375)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben044scf00017928ctg000_1319-7949' '(at5g46910 : 848.0) Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Transcription factor jumonji, JmjN (InterPro:IPR003349); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36460 : 285.0) no description available & (gnl|cdd|66093 : 143.0) no description available & (reliability: 1696.0) & (original description: Putative JMJ706, Description = Lysine-specific demethylase JMJ706, PFAM = PF02375;PF02928;PF02373)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben044scf00036218ctg007_5918-16827' '(at3g48430 : 891.0) Relative of Early Flowering 6 (REF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a positive regulator of flowering in an FLC-dependent pathway. REF6 mutants have hyperacetylation of histone H4 at the FLC locus. REF6 interacts with BES1 in a Y2H assay and in vitro. REF6 may play a role in brassinoteroid signaling by affecting histone methylation in the promoters of BR-responsive genes. It is most closely related to the JHDM3 subfamily of JmjN/C proteins.; relative of early flowering 6 (REF6); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C2H2-like (InterPro:IPR015880), Transcription factor jumonji (InterPro:IPR013129), Zinc finger, C2H2-type (InterPro:IPR007087), Transcription factor jumonji, JmjN (InterPro:IPR003349), Zinc finger, C2H2-type/integrase, DNA-binding (InterPro:IPR013087); BEST Arabidopsis thaliana protein match is: Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein (TAIR:AT5G04240.1); Has 105567 Blast hits to 35250 proteins in 1010 species: Archae - 0; Bacteria - 23; Metazoa - 99094; Fungi - 2247; Plants - 673; Viruses - 7; Other Eukaryotes - 3523 (source: NCBI BLink). & (gnl|cdd|36460 : 179.0) no description available & (gnl|cdd|66093 : 138.0) no description available & (reliability: 1782.0) & (original description: Putative ELF6, Description = Lysine-specific demethylase REF6, PFAM = PF02375;PF02373)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf00751_574543-598740' '(at5g04240 : 747.0) Early Flowering 6 (ELF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a repressor in the photoperiod pathway. ELF6 interacts with BES1 in a Y2H assay, in vitro, and in Arabidosis protoplasts (based on BiFC). ELF6 may play a role in brassinosteroid signaling by affecting histone methylation in the promoters of BR-responsive genes.; EARLY FLOWERING 6 (ELF6); CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C2H2-like (InterPro:IPR015880), Transcription factor jumonji (InterPro:IPR013129), Zinc finger, C2H2-type (InterPro:IPR007087), Transcription factor jumonji, JmjN (InterPro:IPR003349), Zinc finger, C2H2-type/integrase, DNA-binding (InterPro:IPR013087); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 112631 Blast hits to 36360 proteins in 1127 species: Archae - 0; Bacteria - 99; Metazoa - 105700; Fungi - 2573; Plants - 699; Viruses - 11; Other Eukaryotes - 3549 (source: NCBI BLink). & (gnl|cdd|36460 : 238.0) no description available & (gnl|cdd|66093 : 141.0) no description available & (reliability: 1494.0) & (original description: Putative ELF6, Description = Lysine-specific demethylase REF6, PFAM = PF02375;PF02373)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf01063_418537-424533' '(at5g46910 : 582.0) Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Transcription factor jumonji, JmjN (InterPro:IPR003349); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36460 : 256.0) no description available & (gnl|cdd|66093 : 138.0) no description available & (reliability: 1164.0) & (original description: Putative glysoja_034044, Description = Lysine-specific demethylase REF6, PFAM = PF02373;PF02375)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf01450_107442-129345' '(at1g78280 : 1148.0) transferases, transferring glycosyl groups; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Transcription factor jumonji (InterPro:IPR013129), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06550.1); Has 1510 Blast hits to 1497 proteins in 307 species: Archae - 0; Bacteria - 312; Metazoa - 658; Fungi - 137; Plants - 199; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink). & (gnl|cdd|37341 : 422.0) no description available & (reliability: 2296.0) & (original description: Putative psr, Description = Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6, PFAM = PF00646;PF13621)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf01826_745679-756341' '(at3g48430 : 853.0) Relative of Early Flowering 6 (REF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a positive regulator of flowering in an FLC-dependent pathway. REF6 mutants have hyperacetylation of histone H4 at the FLC locus. REF6 interacts with BES1 in a Y2H assay and in vitro. REF6 may play a role in brassinoteroid signaling by affecting histone methylation in the promoters of BR-responsive genes. It is most closely related to the JHDM3 subfamily of JmjN/C proteins.; relative of early flowering 6 (REF6); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C2H2-like (InterPro:IPR015880), Transcription factor jumonji (InterPro:IPR013129), Zinc finger, C2H2-type (InterPro:IPR007087), Transcription factor jumonji, JmjN (InterPro:IPR003349), Zinc finger, C2H2-type/integrase, DNA-binding (InterPro:IPR013087); BEST Arabidopsis thaliana protein match is: Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein (TAIR:AT5G04240.1); Has 105567 Blast hits to 35250 proteins in 1010 species: Archae - 0; Bacteria - 23; Metazoa - 99094; Fungi - 2247; Plants - 673; Viruses - 7; Other Eukaryotes - 3523 (source: NCBI BLink). & (gnl|cdd|36460 : 173.0) no description available & (gnl|cdd|66093 : 137.0) no description available & (reliability: 1706.0) & (original description: Putative ELF6, Description = Lysine-specific demethylase REF6, PFAM = PF02373;PF02375)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf02145_660014-667059' '(at1g11950 : 778.0) Transcription factor jumonji (jmjC) domain-containing protein; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G62310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36570 : 636.0) no description available & (reliability: 1556.0) & (original description: Putative IBM1, Description = Lysine-specific demethylase 3B, PFAM = PF02373;PF10497)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf03326_170541-176325' '(at5g46910 : 594.0) Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Transcription factor jumonji, JmjN (InterPro:IPR003349); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36460 : 260.0) no description available & (gnl|cdd|66093 : 135.0) no description available & (reliability: 1188.0) & (original description: Putative JMJ706, Description = Lysine-specific demethylase REF6, PFAM = PF02373;PF02375)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf03435_13183-22582' '(at1g08620 : 1103.0) PKDM7D; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), FY-rich, C-terminal (InterPro:IPR003889), FY-rich, N-terminal (InterPro:IPR003888), Transcription factor jumonji, JmjN (InterPro:IPR003349), Zinc finger, C5HC2-type (InterPro:IPR004198), FY-rich, C-terminal subgroup (InterPro:IPR018516), Transcription factor jumonji (InterPro:IPR013129), FY-rich, N-terminal subgroup (InterPro:IPR018518); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (TAIR:AT1G30810.2). & (gnl|cdd|36460 : 489.0) no description available & (gnl|cdd|66093 : 172.0) no description available & (reliability: 2206.0) & (original description: Putative JMJ703, Description = Lysine-specific demethylase JMJ703, PFAM = PF02373;PF02375;PF05965;PF02928;PF05964)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf03445_456277-467133' '(at5g63080 : 544.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: transferases, transferring glycosyl groups (TAIR:AT1G78280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37342 : 307.0) no description available & (reliability: 1088.0) & (original description: Putative At5g63080, Description = 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein, PFAM = PF13621)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf04812_167733-174234' '(at5g46910 : 848.0) Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Transcription factor jumonji, JmjN (InterPro:IPR003349); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36460 : 283.0) no description available & (gnl|cdd|66093 : 144.0) no description available & (reliability: 1696.0) & (original description: Putative JMJ706, Description = Lysine-specific demethylase JMJ706, PFAM = PF02373;PF02375;PF02928)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf05417_268891-290114' '(at1g63490 : 739.0) transcription factor jumonji (jmjC) domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), PLU-1-like (InterPro:IPR013637), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (TAIR:AT1G08620.2); Has 2288 Blast hits to 1952 proteins in 202 species: Archae - 0; Bacteria - 15; Metazoa - 1333; Fungi - 459; Plants - 289; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (gnl|cdd|36460 : 332.0) no description available & (gnl|cdd|66093 : 160.0) no description available & (reliability: 1478.0) & (original description: Putative lid, Description = Lysine-specific demethylase 5A, PFAM = PF02375;PF01388;PF08429;PF08429;PF02928;PF02373;PF00628)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf05417_273733-277252' '(at1g63490 : 243.0) transcription factor jumonji (jmjC) domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), PLU-1-like (InterPro:IPR013637), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (TAIR:AT1G08620.2); Has 2288 Blast hits to 1952 proteins in 202 species: Archae - 0; Bacteria - 15; Metazoa - 1333; Fungi - 459; Plants - 289; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (gnl|cdd|71858 : 83.4) no description available & (reliability: 486.0) & (original description: Putative glysoja_004788, Description = Lysine-specific demethylase rbr-2, PFAM = PF08429)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf05417_277253-279187' '(at1g63490 : 107.0) transcription factor jumonji (jmjC) domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), PLU-1-like (InterPro:IPR013637), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (TAIR:AT1G08620.2); Has 2288 Blast hits to 1952 proteins in 202 species: Archae - 0; Bacteria - 15; Metazoa - 1333; Fungi - 459; Plants - 289; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative , Description = Transcription factor jumonji (JmjC) domain protein, PFAM = )' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf07724_73241-79315' '(at3g20810 : 551.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G19840.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37343 : 335.0) no description available & (reliability: 1102.0) & (original description: Putative JMJ30, Description = Lysine-specific demethylase JMJ30, PFAM = PF13621)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf09658_14314-22932' '(at1g08620 : 1097.0) PKDM7D; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), FY-rich, C-terminal (InterPro:IPR003889), FY-rich, N-terminal (InterPro:IPR003888), Transcription factor jumonji, JmjN (InterPro:IPR003349), Zinc finger, C5HC2-type (InterPro:IPR004198), FY-rich, C-terminal subgroup (InterPro:IPR018516), Transcription factor jumonji (InterPro:IPR013129), FY-rich, N-terminal subgroup (InterPro:IPR018518); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (TAIR:AT1G30810.2). & (gnl|cdd|36460 : 491.0) no description available & (gnl|cdd|66093 : 172.0) no description available & (reliability: 2194.0) & (original description: Putative JMJ19, Description = Probable inactive lysine-specific demethylase JMJ19, PFAM = PF02373;PF02928;PF05964;PF02375;PF05965)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf09792_428614-438897' '(at1g08620 : 563.0) PKDM7D; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), FY-rich, C-terminal (InterPro:IPR003889), FY-rich, N-terminal (InterPro:IPR003888), Transcription factor jumonji, JmjN (InterPro:IPR003349), Zinc finger, C5HC2-type (InterPro:IPR004198), FY-rich, C-terminal subgroup (InterPro:IPR018516), Transcription factor jumonji (InterPro:IPR013129), FY-rich, N-terminal subgroup (InterPro:IPR018518); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (TAIR:AT1G30810.2). & (gnl|cdd|36460 : 306.0) no description available & (gnl|cdd|66093 : 116.0) no description available & (reliability: 1126.0) & (original description: Putative JMJ4, Description = Lysine-specific demethylase 5A, PFAM = PF02375;PF02928;PF02373)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf10920_101688-108632' '(at5g06550 : 712.0) CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), F-box domain, Skp2-like (InterPro:IPR022364), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: transferases, transferring glycosyl groups (TAIR:AT1G78280.1); Has 1762 Blast hits to 1747 proteins in 292 species: Archae - 0; Bacteria - 297; Metazoa - 877; Fungi - 168; Plants - 221; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink). & (gnl|cdd|37341 : 385.0) no description available & (reliability: 1424.0) & (original description: Putative jmjd6, Description = Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6, PFAM = PF13621;PF00646)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf11961_79780-94608' '(at5g46910 : 818.0) Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Transcription factor jumonji, JmjN (InterPro:IPR003349); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36460 : 279.0) no description available & (gnl|cdd|66093 : 145.0) no description available & (reliability: 1636.0) & (original description: Putative JMJ706, Description = Lysine-specific demethylase JMJ706, PFAM = PF02375;PF02373;PF02928)' T '27.3.57' 'RNA.regulation of transcription.JUMONJI family' 'niben101scf18328_55325-61570' '(at5g04240 : 368.0) Early Flowering 6 (ELF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a repressor in the photoperiod pathway. ELF6 interacts with BES1 in a Y2H assay, in vitro, and in Arabidosis protoplasts (based on BiFC). ELF6 may play a role in brassinosteroid signaling by affecting histone methylation in the promoters of BR-responsive genes.; EARLY FLOWERING 6 (ELF6); CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C2H2-like (InterPro:IPR015880), Transcription factor jumonji (InterPro:IPR013129), Zinc finger, C2H2-type (InterPro:IPR007087), Transcription factor jumonji, JmjN (InterPro:IPR003349), Zinc finger, C2H2-type/integrase, DNA-binding (InterPro:IPR013087); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 112631 Blast hits to 36360 proteins in 1127 species: Archae - 0; Bacteria - 99; Metazoa - 105700; Fungi - 2573; Plants - 699; Viruses - 11; Other Eukaryotes - 3549 (source: NCBI BLink). & (reliability: 736.0) & (original description: Putative ELF6, Description = Lysine-specific demethylase REF6, PFAM = )' T '27.3.58' 'RNA.regulation of transcription.LUG' 'nbv0.3scaffold15970_27724-32503' '(at4g32551 : 82.8) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (reliability: 162.6) & (original description: Putative , Description = , PFAM = PF08513)' T '27.3.58' 'RNA.regulation of transcription.LUG' 'nbv0.5scaffold115_1100816-1105595' '(at4g32551 : 83.2) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (reliability: 165.6) & (original description: Putative , Description = , PFAM = PF08513)' T '27.3.58' 'RNA.regulation of transcription.LUG' 'nbv0.5scaffold766_419975-422478' '(at2g32700 : 146.0) Encodes a WD40 repeat and LUFS domain containing protein that is similar to LUG. Interacts physically with SEUSS and likely functions as part of a repressor complex that represses AG.; LEUNIG_homolog (LUH); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: flower development, negative regulation of transcription, embryo development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LisH dimerisation motif;WD40/YVTN repeat-like-containing domain (TAIR:AT4G32551.1). & (reliability: 292.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400)' T '27.3.58' 'RNA.regulation of transcription.LUG' 'nbv0.5scaffold1304_113231-219626' '(at4g32551 : 287.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (gnl|cdd|29257 : 170.0) no description available & (gnl|cdd|35493 : 125.0) no description available & (reliability: 546.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400;PF00400;PF00400)' T '27.3.58' 'RNA.regulation of transcription.LUG' 'nbv0.5scaffold3299_248181-255669' '(at4g32551 : 287.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (gnl|cdd|29257 : 145.0) no description available & (gnl|cdd|35487 : 117.0) no description available & (reliability: 566.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400;PF00400;PF00400;PF00400)' T '27.3.58' 'RNA.regulation of transcription.LUG' 'nbv0.5scaffold3299_250669-260289' '(at2g32700 : 148.0) Encodes a WD40 repeat and LUFS domain containing protein that is similar to LUG. Interacts physically with SEUSS and likely functions as part of a repressor complex that represses AG.; LEUNIG_homolog (LUH); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: flower development, negative regulation of transcription, embryo development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LisH dimerisation motif;WD40/YVTN repeat-like-containing domain (TAIR:AT4G32551.1). & (gnl|cdd|29257 : 91.6) no description available & (reliability: 296.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400;PF00400;PF00400)' T '27.3.58' 'RNA.regulation of transcription.LUG' 'niben044scf00002007ctg012_323-2947' '(at4g32551 : 100.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (reliability: 196.4) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = )' T '27.3.58' 'RNA.regulation of transcription.LUG' 'niben044scf00010967ctg009_81-6423' '(at4g32551 : 300.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (gnl|cdd|29257 : 160.0) no description available & (gnl|cdd|35487 : 125.0) no description available & (reliability: 596.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '27.3.58' 'RNA.regulation of transcription.LUG' 'niben044scf00010967ctg012_1-3300' '(at4g32551 : 290.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (gnl|cdd|29257 : 150.0) no description available & (gnl|cdd|35493 : 115.0) no description available & (reliability: 566.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400;PF00400)' T '27.3.58' 'RNA.regulation of transcription.LUG' 'niben044scf00018251ctg008_24876-27583' '(at2g32700 : 135.0) Encodes a WD40 repeat and LUFS domain containing protein that is similar to LUG. Interacts physically with SEUSS and likely functions as part of a repressor complex that represses AG.; LEUNIG_homolog (LUH); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: flower development, negative regulation of transcription, embryo development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LisH dimerisation motif;WD40/YVTN repeat-like-containing domain (TAIR:AT4G32551.1). & (reliability: 270.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400)' T '27.3.58' 'RNA.regulation of transcription.LUG' 'niben044scf00029274ctg004_1-4691' '(at4g32551 : 103.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (reliability: 191.8) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF08513)' T '27.3.58' 'RNA.regulation of transcription.LUG' 'niben101scf00920_636456-645192' '(at2g32700 : 816.0) Encodes a WD40 repeat and LUFS domain containing protein that is similar to LUG. Interacts physically with SEUSS and likely functions as part of a repressor complex that represses AG.; LEUNIG_homolog (LUH); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: flower development, negative regulation of transcription, embryo development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LisH dimerisation motif;WD40/YVTN repeat-like-containing domain (TAIR:AT4G32551.1). & (gnl|cdd|29257 : 198.0) no description available & (gnl|cdd|35487 : 178.0) no description available & (p93107|pf20_chlre : 82.8) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1632.0) & (original description: Putative LUH, Description = Transcriptional corepressor LEUNIG_HOMOLOG, PFAM = PF08513;PF00400;PF00400;PF00400;PF00400)' T '27.3.58' 'RNA.regulation of transcription.LUG' 'niben101scf01436_250400-370264' '(at4g32551 : 287.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (gnl|cdd|29257 : 170.0) no description available & (gnl|cdd|35493 : 125.0) no description available & (reliability: 546.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400;PF00400;PF00400)' T '27.3.58' 'RNA.regulation of transcription.LUG' 'niben101scf01436_268469-283098' '(at4g32551 : 289.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (gnl|cdd|29257 : 153.0) no description available & (gnl|cdd|35487 : 123.0) no description available & (reliability: 566.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400;PF00400;PF00400;PF00400)' T '27.3.58' 'RNA.regulation of transcription.LUG' 'niben101scf01436_276220-282098' '(at4g32551 : 303.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (gnl|cdd|29257 : 161.0) no description available & (gnl|cdd|35487 : 128.0) no description available & (reliability: 600.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '27.3.58' 'RNA.regulation of transcription.LUG' 'niben101scf05582_209739-219330' '(at2g32700 : 832.0) Encodes a WD40 repeat and LUFS domain containing protein that is similar to LUG. Interacts physically with SEUSS and likely functions as part of a repressor complex that represses AG.; LEUNIG_homolog (LUH); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: flower development, negative regulation of transcription, embryo development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LisH dimerisation motif;WD40/YVTN repeat-like-containing domain (TAIR:AT4G32551.1). & (gnl|cdd|29257 : 201.0) no description available & (gnl|cdd|35487 : 187.0) no description available & (p93107|pf20_chlre : 83.2) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1664.0) & (original description: Putative LUH, Description = Transcriptional corepressor LEUNIG_HOMOLOG, PFAM = PF00400;PF00400;PF00400;PF00400;PF08513)' T '27.3.58' 'RNA.regulation of transcription.LUG' 'niben101scf05609_270914-275936' '(at4g32551 : 82.4) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (reliability: 164.0) & (original description: Putative , Description = , PFAM = PF08513)' T '27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'nbv0.3scaffold2844_61256-68280' '(at1g22310 : 118.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 8 (MBD8); FUNCTIONS IN: methyl-CpG binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956), DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); Has 148 Blast hits to 124 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 54; Fungi - 5; Plants - 70; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative PGSC0003DMG400012552, Description = 5'-adenylylsulfate reductase-like 4, PFAM = )' T '27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'nbv0.3scaffold11121_1-3929' '(at3g15790 : 102.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 11 (MBD11); FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 10 (TAIR:AT1G15340.1); Has 9357 Blast hits to 6006 proteins in 613 species: Archae - 14; Bacteria - 964; Metazoa - 3510; Fungi - 943; Plants - 531; Viruses - 98; Other Eukaryotes - 3297 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative pdb1, Description = Methyl-CpG-binding domain protein, PFAM = PF01429)' T '27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'nbv0.3scaffold25634_14706-25123' '(at1g22310 : 126.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 8 (MBD8); FUNCTIONS IN: methyl-CpG binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956), DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); Has 148 Blast hits to 124 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 54; Fungi - 5; Plants - 70; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative MBD117, Description = DNA-binding, integrase-type, PFAM = PF01429)' T '27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'nbv0.5scaffold957_81236-91653' '(at1g22310 : 124.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 8 (MBD8); FUNCTIONS IN: methyl-CpG binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956), DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); Has 148 Blast hits to 124 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 54; Fungi - 5; Plants - 70; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative MBD117, Description = DNA-binding, integrase-type, PFAM = PF01429)' T '27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'nbv0.5scaffold1495_279318-286342' '(at1g22310 : 117.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 8 (MBD8); FUNCTIONS IN: methyl-CpG binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956), DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); Has 148 Blast hits to 124 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 54; Fungi - 5; Plants - 70; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative MBD117, Description = Methylcytosine binding domain protein, PFAM = PF01429)' T '27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben044scf00008028ctg000_2432-9328' '(at1g22310 : 109.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 8 (MBD8); FUNCTIONS IN: methyl-CpG binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956), DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); Has 148 Blast hits to 124 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 54; Fungi - 5; Plants - 70; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative PGSC0003DMG400012552, Description = Methyl-CpG-binding domain-containing protein 8, PFAM = )' T '27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben044scf00017947ctg006_1-1372' '(at3g01460 : 84.0) Encodes a protein with a methyl-CpG-binding domain. Has sequence similarity to human MBD proteins. Involved in the modification of the FLC chromatin acetylation state to affect FLC expression. Mutants show an early flowering, and enhanced shoot branching phenotypes.; methyl-CPG-binding domain 9 (MBD9); FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED IN: photoperiodism, flowering, secondary shoot formation, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, RING-type (InterPro:IPR001841), FY-rich, C-terminal (InterPro:IPR003889), Zinc finger, PHD-type (InterPro:IPR001965), FY-rich, N-terminal (InterPro:IPR003888), DNA-binding, integrase-type (InterPro:IPR016177), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Methyl-CpG DNA binding (InterPro:IPR001739), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD-type zinc finger family protein (TAIR:AT1G77250.1); Has 6416 Blast hits to 3988 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 4085; Fungi - 602; Plants - 1260; Viruses - 0; Other Eukaryotes - 469 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative MBD9, Description = Methyl-CpG-binding domain-containing protein 9, PFAM = )' T '27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf00151_350524-355960' '(at3g15790 : 100.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 11 (MBD11); FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 10 (TAIR:AT1G15340.1); Has 9357 Blast hits to 6006 proteins in 613 species: Archae - 14; Bacteria - 964; Metazoa - 3510; Fungi - 943; Plants - 531; Viruses - 98; Other Eukaryotes - 3297 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative pdb1, Description = Methyl-CpG-binding domain protein, PFAM = PF01429)' T '27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf00981_537393-541245' '(at5g35330 : 246.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain protein 02 (MBD02); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 12 (TAIR:AT5G35338.2). & (gnl|cdd|29025 : 86.2) no description available & (gnl|cdd|39363 : 83.9) no description available & (reliability: 492.0) & (original description: Putative MBD2, Description = Methyl-CpG-binding domain-containing protein 2, PFAM = PF07496;PF01429)' T '27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf02112_83773-90804' '(at3g15790 : 80.1) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 11 (MBD11); FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 10 (TAIR:AT1G15340.1); Has 9357 Blast hits to 6006 proteins in 613 species: Archae - 14; Bacteria - 964; Metazoa - 3510; Fungi - 943; Plants - 531; Viruses - 98; Other Eukaryotes - 3297 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative pdb1, Description = Methyl-CpG-binding domain protein, PFAM = PF01429)' T '27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf02530_247009-251128' '(at5g35330 : 241.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain protein 02 (MBD02); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 12 (TAIR:AT5G35338.2). & (gnl|cdd|29025 : 84.6) no description available & (reliability: 482.0) & (original description: Putative MBD2, Description = Methyl-CpG-binding domain-containing protein 2, PFAM = PF07496;PF01429)' T '27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf03066_5373-29902' '(at3g01460 : 815.0) Encodes a protein with a methyl-CpG-binding domain. Has sequence similarity to human MBD proteins. Involved in the modification of the FLC chromatin acetylation state to affect FLC expression. Mutants show an early flowering, and enhanced shoot branching phenotypes.; methyl-CPG-binding domain 9 (MBD9); FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED IN: photoperiodism, flowering, secondary shoot formation, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, RING-type (InterPro:IPR001841), FY-rich, C-terminal (InterPro:IPR003889), Zinc finger, PHD-type (InterPro:IPR001965), FY-rich, N-terminal (InterPro:IPR003888), DNA-binding, integrase-type (InterPro:IPR016177), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Methyl-CpG DNA binding (InterPro:IPR001739), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD-type zinc finger family protein (TAIR:AT1G77250.1); Has 6416 Blast hits to 3988 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 4085; Fungi - 602; Plants - 1260; Viruses - 0; Other Eukaryotes - 469 (source: NCBI BLink). & (reliability: 1630.0) & (original description: Putative , Description = Putative methyl-CpG-binding domain-containing protein 9-like, PFAM = PF00439;PF15612;PF00628;PF02791;PF15613;PF05965)' T '27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf03737_191536-198479' '(at3g15790 : 82.8) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 11 (MBD11); FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 10 (TAIR:AT1G15340.1); Has 9357 Blast hits to 6006 proteins in 613 species: Archae - 14; Bacteria - 964; Metazoa - 3510; Fungi - 943; Plants - 531; Viruses - 98; Other Eukaryotes - 3297 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative pdb1, Description = Methyl-CpG-binding domain protein, PFAM = PF01429)' T '27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf03930_51627-55461' '(at3g15790 : 100.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 11 (MBD11); FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 10 (TAIR:AT1G15340.1); Has 9357 Blast hits to 6006 proteins in 613 species: Archae - 14; Bacteria - 964; Metazoa - 3510; Fungi - 943; Plants - 531; Viruses - 98; Other Eukaryotes - 3297 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative MBD1, Description = DNA methylation protein MBD1, PFAM = PF01429)' T '27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf03941_208795-215333' '(at3g46580 : 86.7) Protein containing a putative methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain protein 5 (MBD5); FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: perinucleolar chromocenter; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 6 (TAIR:AT5G59380.1); Has 120 Blast hits to 118 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 64; Fungi - 4; Plants - 49; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative MBD5, Description = MBD5, PFAM = PF01429)' T '27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf07585_96801-105845' '(at1g22310 : 114.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 8 (MBD8); FUNCTIONS IN: methyl-CpG binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956), DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); Has 148 Blast hits to 124 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 54; Fungi - 5; Plants - 70; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative MBD117, Description = Methylcytosine binding domain protein, PFAM = PF01429)' T '27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf07764_111631-117225' '(at3g46580 : 87.8) Protein containing a putative methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain protein 5 (MBD5); FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: perinucleolar chromocenter; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 6 (TAIR:AT5G59380.1); Has 120 Blast hits to 118 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 64; Fungi - 4; Plants - 49; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative MBD5, Description = MBD5, PFAM = PF01429)' T '27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf07854_10256-15644' '(at5g59800 : 97.8) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. Interacts with arginine methyltransferase 11. (AtPRMT11; methyl-CPG-binding domain 7 (MBD7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative PGSC0003DMG400015535, Description = , PFAM = PF01429;PF01429)' T '27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf08045_192853-196972' '(at5g35330 : 253.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain protein 02 (MBD02); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 12 (TAIR:AT5G35338.2). & (gnl|cdd|29025 : 84.2) no description available & (reliability: 506.0) & (original description: Putative MBD2, Description = Methyl-CpG-binding domain-containing protein 2, PFAM = PF01429;PF07496)' T '27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf11723_181963-184653' '(at3g63030 : 177.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 4 (MBD4); FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 1 (TAIR:AT4G22745.1); Has 159 Blast hits to 159 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 0; Plants - 112; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|39363 : 92.0) no description available & (reliability: 354.0) & (original description: Putative Os05g0404700, Description = Os05g0404700 protein, PFAM = PF07496;PF01429)' T '27.3.59' 'RNA.regulation of transcription.Methyl binding domain proteins' 'niben101scf12266_1041565-1046154' '(at3g15790 : 105.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 11 (MBD11); FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 10 (TAIR:AT1G15340.1); Has 9357 Blast hits to 6006 proteins in 613 species: Archae - 14; Bacteria - 964; Metazoa - 3510; Fungi - 943; Plants - 531; Viruses - 98; Other Eukaryotes - 3297 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative pdb1, Description = Methyl-CpG-binding domain protein, PFAM = PF01429)' T '27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'nbv0.3scaffold1231_64687-72873' '(at2g43500 : 720.0) Plant regulator RWP-RK family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT3G59580.2); Has 665 Blast hits to 521 proteins in 81 species: Archae - 0; Bacteria - 147; Metazoa - 3; Fungi - 2; Plants - 476; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|65798 : 88.2) no description available & (reliability: 1440.0) & (original description: Putative NLP9, Description = Protein NLP9, PFAM = PF02042;PF00564)' T '27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'nbv0.3scaffold17835_17816-27476' '(at4g35590 : 202.0) RWP-RK domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, LP.12 twelve leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: RWP-RK domain-containing protein (TAIR:AT5G66990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|65798 : 82.0) no description available & (reliability: 404.0) & (original description: Putative RKD5, Description = Protein RKD5, PFAM = PF02042)' T '27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'nbv0.3scaffold21746_5146-12741' '(at4g24020 : 880.0) Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.; NIN like protein 7 (NLP7); CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G64530.1); Has 724 Blast hits to 614 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 15; Plants - 632; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|65798 : 85.5) no description available & (reliability: 1760.0) & (original description: Putative NLP7, Description = Protein NLP7, PFAM = PF00564;PF02042)' T '27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'nbv0.3scaffold37150_11286-17737' '(at4g24020 : 268.0) Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.; NIN like protein 7 (NLP7); CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G64530.1); Has 724 Blast hits to 614 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 15; Plants - 632; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative PGSC0003DMG401012256, Description = , PFAM = PF02042;PF00564)' T '27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'nbv0.3scaffold51625_7072-13324' '(at4g35270 : 755.0) Plant regulator RWP-RK family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT2G17150.1); Has 705 Blast hits to 622 proteins in 59 species: Archae - 0; Bacteria - 9; Metazoa - 13; Fungi - 14; Plants - 585; Viruses - 3; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|47941 : 84.1) no description available & (reliability: 1510.0) & (original description: Putative NLP2, Description = Protein NLP2, PFAM = PF00564;PF02042)' T '27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'nbv0.5scaffold6341_72280-75362' '(at5g53040 : 129.0) RWP-RK domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: RWP-RK domain-containing protein (TAIR:AT5G66990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative RKD1, Description = Plant regulator RWP-RK, PFAM = PF02042)' T '27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben044scf00014858ctg005_1-2333' '(at2g43500 : 228.0) Plant regulator RWP-RK family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT3G59580.2); Has 665 Blast hits to 521 proteins in 81 species: Archae - 0; Bacteria - 147; Metazoa - 3; Fungi - 2; Plants - 476; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative NLP1, Description = NIN-like protein 1, PFAM = PF00564;PF02042)' T '27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben044scf00015131ctg009_2085-7055' '(at4g24020 : 183.0) Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.; NIN like protein 7 (NLP7); CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G64530.1); Has 724 Blast hits to 614 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 15; Plants - 632; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative)' T '27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben044scf00015131ctg009_7880-11910' '(at4g24020 : 169.0) Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.; NIN like protein 7 (NLP7); CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G64530.1); Has 724 Blast hits to 614 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 15; Plants - 632; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative)' T '27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben044scf00028753ctg001_1400-8753' '(at4g24020 : 893.0) Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.; NIN like protein 7 (NLP7); CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G64530.1); Has 724 Blast hits to 614 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 15; Plants - 632; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|47941 : 86.1) no description available & (reliability: 1786.0) & (original description: Putative NLP7, Description = Protein NLP7, PFAM = PF00564;PF02042)' T '27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben044scf00031113ctg000_11776-18125' '(at4g24020 : 280.0) Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.; NIN like protein 7 (NLP7); CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G64530.1); Has 724 Blast hits to 614 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 15; Plants - 632; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative PGSC0003DMG401012256, Description = , PFAM = PF00564;PF02042)' T '27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben044scf00031537ctg000_1-3665' '(at4g35270 : 420.0) Plant regulator RWP-RK family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT2G17150.1); Has 705 Blast hits to 622 proteins in 59 species: Archae - 0; Bacteria - 9; Metazoa - 13; Fungi - 14; Plants - 585; Viruses - 3; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|47941 : 85.7) no description available & (reliability: 840.0) & (original description: Putative NLP1, Description = NIN-like protein 1, PFAM = PF00564;PF02042)' T '27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf00063_1335079-1338648' '(at1g18790 : 150.0) RWP-RK domain-containing protein; CONTAINS InterPro DOMAIN/s: Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: RWP-RK domain-containing protein (TAIR:AT1G74480.1); Has 558 Blast hits to 554 proteins in 54 species: Archae - 0; Bacteria - 12; Metazoa - 59; Fungi - 0; Plants - 419; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative RKD1, Description = Plant regulator RWP-RK, PFAM = PF02042)' T '27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf02041_427581-437241' '(at4g35590 : 175.0) RWP-RK domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, LP.12 twelve leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: RWP-RK domain-containing protein (TAIR:AT5G66990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|65798 : 81.6) no description available & (reliability: 350.0) & (original description: Putative ARALYDRAFT_491087, Description = RWP-RK domain-containing protein, PFAM = PF02042)' T '27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf03850_342572-350586' '(at4g24020 : 868.0) Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.; NIN like protein 7 (NLP7); CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G64530.1); Has 724 Blast hits to 614 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 15; Plants - 632; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|65798 : 85.5) no description available & (reliability: 1736.0) & (original description: Putative NLP7, Description = Protein NLP7, PFAM = PF00564;PF02042)' T '27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf04083_147619-150701' '(at5g53040 : 130.0) RWP-RK domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: RWP-RK domain-containing protein (TAIR:AT5G66990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative RKD1, Description = Plant regulator RWP-RK, PFAM = PF02042)' T '27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf05154_206949-209708' '(at5g53040 : 102.0) RWP-RK domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: RWP-RK domain-containing protein (TAIR:AT5G66990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative RKD4, Description = AtRKD4, PFAM = PF02042)' T '27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf05937_280147-287013' '(at4g24020 : 220.0) Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.; NIN like protein 7 (NLP7); CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G64530.1); Has 724 Blast hits to 614 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 15; Plants - 632; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative)' T '27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf06249_89950-93708' '(at1g18790 : 151.0) RWP-RK domain-containing protein; CONTAINS InterPro DOMAIN/s: Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: RWP-RK domain-containing protein (TAIR:AT1G74480.1); Has 558 Blast hits to 554 proteins in 54 species: Archae - 0; Bacteria - 12; Metazoa - 59; Fungi - 0; Plants - 419; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative RKD2, Description = Protein RKD2, PFAM = PF02042)' T '27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf06439_282347-291354' '(at2g43500 : 732.0) Plant regulator RWP-RK family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT3G59580.2); Has 665 Blast hits to 521 proteins in 81 species: Archae - 0; Bacteria - 147; Metazoa - 3; Fungi - 2; Plants - 476; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|65798 : 83.9) no description available & (reliability: 1464.0) & (original description: Putative NLP8, Description = Protein NLP8, PFAM = PF00564;PF02042)' T '27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf08326_69861-76312' '(at4g24020 : 281.0) Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.; NIN like protein 7 (NLP7); CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G64530.1); Has 724 Blast hits to 614 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 15; Plants - 632; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (reliability: 562.0) & (original description: Putative PGSC0003DMG401012256, Description = , PFAM = PF00564;PF02042)' T '27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf08326_76015-83194' '(at4g24020 : 936.0) Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.; NIN like protein 7 (NLP7); CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G64530.1); Has 724 Blast hits to 614 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 15; Plants - 632; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|65798 : 86.2) no description available & (reliability: 1872.0) & (original description: Putative NLP7, Description = Protein NLP7, PFAM = PF02042;PF00564)' T '27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf08391_32268-42349' '(at2g43500 : 724.0) Plant regulator RWP-RK family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT3G59580.2); Has 665 Blast hits to 521 proteins in 81 species: Archae - 0; Bacteria - 147; Metazoa - 3; Fungi - 2; Plants - 476; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|65798 : 88.2) no description available & (reliability: 1448.0) & (original description: Putative NLP9, Description = Protein NLP9, PFAM = PF02042;PF00564)' T '27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf10559_4685-11203' '(at1g64530 : 192.0) Plant regulator RWP-RK family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: NIN like protein 7 (TAIR:AT4G24020.1); Has 703 Blast hits to 646 proteins in 50 species: Archae - 0; Bacteria - 2; Metazoa - 50; Fungi - 0; Plants - 585; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative , Description = , PFAM = PF02042;PF00564)' T '27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf10559_21880-49106' '(at4g24020 : 211.0) Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.; NIN like protein 7 (NLP7); CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G64530.1); Has 724 Blast hits to 614 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 15; Plants - 632; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative PGSC0003DMG400008649, Description = , PFAM = PF03195)' T '27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf10559_28432-238840' '(at4g24020 : 175.0) Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.; NIN like protein 7 (NLP7); CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G64530.1); Has 724 Blast hits to 614 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 15; Plants - 632; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative LOC100216574, Description = BHLH transcription factor-like protein, PFAM = )' T '27.3.60' 'RNA.regulation of transcription.NIN-like bZIP-related family' 'niben101scf10968_18834-25068' '(at1g64530 : 159.0) Plant regulator RWP-RK family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: NIN like protein 7 (TAIR:AT4G24020.1); Has 703 Blast hits to 646 proteins in 50 species: Archae - 0; Bacteria - 2; Metazoa - 50; Fungi - 0; Plants - 585; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative , Description = , PFAM = PF00564;PF02042)' T '27.3.61' 'RNA.regulation of transcription.NPR1/NIM1' '' '' '27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'nbv0.5scaffold898_191509-241459' '(q39601|ssrp1_catro : 853.0) FACT complex subunit SSRP1 (Facilitates chromatin transcription complex subunit SSRP1) (Recombination signal sequence recognition protein 1) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g28730 : 762.0) encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SSRP1. Along with STP16 binds to the promoter of FLC.; high mobility group (HMG); CONTAINS InterPro DOMAIN/s: Structure-specific recognition protein (InterPro:IPR000969), High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B1 (TAIR:AT3G51880.2); Has 8066 Blast hits to 7188 proteins in 653 species: Archae - 0; Bacteria - 14; Metazoa - 5623; Fungi - 822; Plants - 671; Viruses - 15; Other Eukaryotes - 921 (source: NCBI BLink). & (gnl|cdd|35746 : 598.0) no description available & (gnl|cdd|67166 : 333.0) no description available & (reliability: 1524.0) & (original description: Putative SSRP1, Description = FACT complex subunit SSRP1, PFAM = PF08512;PF03531;PF17292)' T '27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben044scf00016163ctg008_10640-13199' '(at1g76110 : 171.0) HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain (TAIR:AT1G04880.1); Has 3338 Blast hits to 2805 proteins in 278 species: Archae - 0; Bacteria - 0; Metazoa - 2430; Fungi - 276; Plants - 321; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative NFD9, Description = High mobility group B protein 9, PFAM = PF00505)' T '27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben044scf00017064ctg003_1-3009' '(at5g23420 : 112.0) Encodes HMGB6, a protein belonging to the subgroup of HMGB (high mobility group B) proteins. Localized in the nucleus. Binds to supercoiled DNA in vitro. HMGB6 is phosphorylated by protein kinase CK2alpha within its acidic C-terminal domain.; high-mobility group box 6 (HMGB6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 224.0) & (original description: Putative HMGB4, Description = High mobility group B protein 4, PFAM = PF00505)' T '27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben044scf00027376ctg003_7409-14876' '(q39601|ssrp1_catro : 835.0) FACT complex subunit SSRP1 (Facilitates chromatin transcription complex subunit SSRP1) (Recombination signal sequence recognition protein 1) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g28730 : 675.0) encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SSRP1. Along with STP16 binds to the promoter of FLC.; high mobility group (HMG); CONTAINS InterPro DOMAIN/s: Structure-specific recognition protein (InterPro:IPR000969), High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B1 (TAIR:AT3G51880.2); Has 8066 Blast hits to 7188 proteins in 653 species: Archae - 0; Bacteria - 14; Metazoa - 5623; Fungi - 822; Plants - 671; Viruses - 15; Other Eukaryotes - 921 (source: NCBI BLink). & (gnl|cdd|35746 : 572.0) no description available & (gnl|cdd|67166 : 262.0) no description available & (reliability: 1350.0) & (original description: Putative SSRP1, Description = FACT complex subunit SSRP1, PFAM = PF00505;PF08512;PF17292;PF03531)' T '27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben044scf00034559ctg013_8790-19036' '(at5g08630 : 588.0) DDT domain-containing protein; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), DDT domain (InterPro:IPR004022), DDT domain, subgroup (InterPro:IPR018500), WSTF/Acf1/Cbp146 (InterPro:IPR013136); Has 7496 Blast hits to 4698 proteins in 418 species: Archae - 4; Bacteria - 337; Metazoa - 2683; Fungi - 719; Plants - 380; Viruses - 89; Other Eukaryotes - 3284 (source: NCBI BLink). & (gnl|cdd|36459 : 102.0) no description available & (reliability: 1176.0) & (original description: Putative BnaC09g47370D, Description = BnaC09g47370D protein, PFAM = PF15613;PF10537;PF02791)' T '27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben101scf00414_333526-344399' '(at3g13350 : 276.0) HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain (TAIR:AT1G55650.1); Has 1937 Blast hits to 1906 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 1434; Fungi - 73; Plants - 249; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|37955 : 112.0) no description available & (gnl|cdd|47805 : 84.1) no description available & (reliability: 552.0) & (original description: Putative HMGB10, Description = High mobility group B protein 10, PFAM = PF01388;PF00505)' T '27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben101scf00446_240183-249598' '(at5g64630 : 607.0) Chromatin Assembly Factor-1 (CAF-1) p60 subunit. Involved in organization of the shoot and root apical meristems. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis.; FASCIATA 2 (FAS2); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: homolog of histone chaperone HIRA (TAIR:AT3G44530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36227 : 448.0) no description available & (gnl|cdd|29257 : 130.0) no description available & (reliability: 1214.0) & (original description: Putative FAS2, Description = Chromatin assembly factor 1 subunit FAS2, PFAM = PF00400;PF00400;PF00400;PF00400)' T '27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben101scf00671_53008-56458' '(p40619|hmgl_iponi : 99.4) HMG1/2-like protein - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (at1g20696 : 90.1) Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha.; high mobility group B3 (HMGB3); FUNCTIONS IN: chromatin binding, structural constituent of chromatin, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B2 (TAIR:AT1G20693.2); Has 5742 Blast hits to 4932 proteins in 507 species: Archae - 0; Bacteria - 0; Metazoa - 4274; Fungi - 383; Plants - 553; Viruses - 0; Other Eukaryotes - 532 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative hmg1, Description = HMG1/2-like protein, PFAM = PF00505)' T '27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben101scf00807_359963-368711' '(at1g76110 : 314.0) HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain (TAIR:AT1G04880.1); Has 3338 Blast hits to 2805 proteins in 278 species: Archae - 0; Bacteria - 0; Metazoa - 2430; Fungi - 276; Plants - 321; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink). & (gnl|cdd|37955 : 114.0) no description available & (gnl|cdd|47805 : 92.2) no description available & (reliability: 628.0) & (original description: Putative HMGB9, Description = High mobility group B protein 9, PFAM = PF01388;PF00505)' T '27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben101scf01326_996505-1004851' '(q39601|ssrp1_catro : 912.0) FACT complex subunit SSRP1 (Facilitates chromatin transcription complex subunit SSRP1) (Recombination signal sequence recognition protein 1) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g28730 : 750.0) encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SSRP1. Along with STP16 binds to the promoter of FLC.; high mobility group (HMG); CONTAINS InterPro DOMAIN/s: Structure-specific recognition protein (InterPro:IPR000969), High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B1 (TAIR:AT3G51880.2); Has 8066 Blast hits to 7188 proteins in 653 species: Archae - 0; Bacteria - 14; Metazoa - 5623; Fungi - 822; Plants - 671; Viruses - 15; Other Eukaryotes - 921 (source: NCBI BLink). & (gnl|cdd|35746 : 635.0) no description available & (gnl|cdd|67166 : 331.0) no description available & (reliability: 1500.0) & (original description: Putative SSRP1, Description = FACT complex subunit SSRP1, PFAM = PF08512;PF00505;PF17292;PF03531)' T '27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben101scf03673_269670-273099' '(p40619|hmgl_iponi : 95.9) HMG1/2-like protein - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (at1g20696 : 90.9) Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha.; high mobility group B3 (HMGB3); FUNCTIONS IN: chromatin binding, structural constituent of chromatin, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B2 (TAIR:AT1G20693.2); Has 5742 Blast hits to 4932 proteins in 507 species: Archae - 0; Bacteria - 0; Metazoa - 4274; Fungi - 383; Plants - 553; Viruses - 0; Other Eukaryotes - 532 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative hmg1, Description = HMG1/2-like protein, PFAM = PF00505)' T '27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben101scf03882_659700-668824' '(at5g64630 : 610.0) Chromatin Assembly Factor-1 (CAF-1) p60 subunit. Involved in organization of the shoot and root apical meristems. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis.; FASCIATA 2 (FAS2); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: homolog of histone chaperone HIRA (TAIR:AT3G44530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36227 : 447.0) no description available & (gnl|cdd|29257 : 127.0) no description available & (reliability: 1220.0) & (original description: Putative FAS2, Description = Chromatin assembly factor 1 subunit FAS2, PFAM = PF00400;PF00400;PF00400;PF00400)' T '27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben101scf03985_358027-363510' '(at4g23800 : 226.0) HMG (high mobility group) box protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: HMG (high mobility group) box protein (TAIR:AT4G11080.1). & (reliability: 452.0) & (original description: Putative HMGB6, Description = High mobility group B protein 6, PFAM = PF00505;PF00505;PF00505)' T '27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben101scf04181_73819-77619' '(at5g23420 : 112.0) Encodes HMGB6, a protein belonging to the subgroup of HMGB (high mobility group B) proteins. Localized in the nucleus. Binds to supercoiled DNA in vitro. HMGB6 is phosphorylated by protein kinase CK2alpha within its acidic C-terminal domain.; high-mobility group box 6 (HMGB6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 224.0) & (original description: Putative HMG7, Description = HMG transcription factor, PFAM = PF00505)' T '27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben101scf06172_34157-41642' '(q39601|ssrp1_catro : 912.0) FACT complex subunit SSRP1 (Facilitates chromatin transcription complex subunit SSRP1) (Recombination signal sequence recognition protein 1) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at3g28730 : 749.0) encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SSRP1. Along with STP16 binds to the promoter of FLC.; high mobility group (HMG); CONTAINS InterPro DOMAIN/s: Structure-specific recognition protein (InterPro:IPR000969), High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B1 (TAIR:AT3G51880.2); Has 8066 Blast hits to 7188 proteins in 653 species: Archae - 0; Bacteria - 14; Metazoa - 5623; Fungi - 822; Plants - 671; Viruses - 15; Other Eukaryotes - 921 (source: NCBI BLink). & (gnl|cdd|35746 : 633.0) no description available & (gnl|cdd|67166 : 328.0) no description available & (reliability: 1498.0) & (original description: Putative SSRP1, Description = FACT complex subunit SSRP1, PFAM = PF03531;PF00505;PF17292;PF08512)' T '27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben101scf07616_244308-254264' '(at5g08630 : 606.0) DDT domain-containing protein; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), DDT domain (InterPro:IPR004022), DDT domain, subgroup (InterPro:IPR018500), WSTF/Acf1/Cbp146 (InterPro:IPR013136); Has 7496 Blast hits to 4698 proteins in 418 species: Archae - 4; Bacteria - 337; Metazoa - 2683; Fungi - 719; Plants - 380; Viruses - 89; Other Eukaryotes - 3284 (source: NCBI BLink). & (gnl|cdd|36459 : 111.0) no description available & (reliability: 1212.0) & (original description: Putative BnaC09g47370D, Description = BnaC09g47370D protein, PFAM = PF10537;PF15613;PF02791)' T '27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben101scf09442_625682-628907' '(at1g20696 : 112.0) Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha.; high mobility group B3 (HMGB3); FUNCTIONS IN: chromatin binding, structural constituent of chromatin, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B2 (TAIR:AT1G20693.2); Has 5742 Blast hits to 4932 proteins in 507 species: Archae - 0; Bacteria - 0; Metazoa - 4274; Fungi - 383; Plants - 553; Viruses - 0; Other Eukaryotes - 532 (source: NCBI BLink). & (p40619|hmgl_iponi : 108.0) HMG1/2-like protein - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 224.0) & (original description: Putative T231, Description = DNA-binding protein, PFAM = PF00505)' T '27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'niben101scf23557_73767-77297' '(at5g23420 : 94.7) Encodes HMGB6, a protein belonging to the subgroup of HMGB (high mobility group B) proteins. Localized in the nucleus. Binds to supercoiled DNA in vitro. HMGB6 is phosphorylated by protein kinase CK2alpha within its acidic C-terminal domain.; high-mobility group box 6 (HMGB6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 189.4) & (original description: Putative hmg1, Description = DNA-binding protein MNB1B, PFAM = PF00505)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'nbv0.3scaffold17512_17669-32615' '(at3g14980 : 590.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; FUNCTIONS IN: DNA binding, zinc ion binding, N-acetyltransferase activity; INVOLVED IN: regulation of transcription, DNA-dependent, metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase (InterPro:IPR000182), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT1G05380.2); Has 4644 Blast hits to 3909 proteins in 217 species: Archae - 1; Bacteria - 6; Metazoa - 3256; Fungi - 362; Plants - 697; Viruses - 0; Other Eukaryotes - 322 (source: NCBI BLink). & (reliability: 1180.0) & (original description: Putative IDM1, Description = Chromodomain-helicase-DNA-binding protein 4, PFAM = PF00628;PF16135)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'nbv0.3scaffold47727_374-15546' '(at2g36720 : 626.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (TAIR:AT2G27980.1); Has 4396 Blast hits to 3645 proteins in 210 species: Archae - 0; Bacteria - 0; Metazoa - 2916; Fungi - 398; Plants - 780; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). & (reliability: 1252.0) & (original description: Putative BnaC04g16390D, Description = BnaC04g16390D protein, PFAM = PF00628;PF16135)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'nbv0.5scaffold352_743091-758392' '(at3g14980 : 584.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; FUNCTIONS IN: DNA binding, zinc ion binding, N-acetyltransferase activity; INVOLVED IN: regulation of transcription, DNA-dependent, metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase (InterPro:IPR000182), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT1G05380.2); Has 4644 Blast hits to 3909 proteins in 217 species: Archae - 1; Bacteria - 6; Metazoa - 3256; Fungi - 362; Plants - 697; Viruses - 0; Other Eukaryotes - 322 (source: NCBI BLink). & (reliability: 1168.0) & (original description: Putative IDM1, Description = Chromodomain-helicase-DNA-binding protein 4, PFAM = PF00628;PF16135)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'nbv0.5scaffold4795_148342-160231' '(at3g51120 : 581.0) DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: histone modification, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Plus-3 domain, subgroup (InterPro:IPR018144), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), GYF (InterPro:IPR003169), SWIB/MDM2 domain (InterPro:IPR003121), Plus-3 (InterPro:IPR004343), SWIB domain (InterPro:IPR019835), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: nucleic acid binding;zinc ion binding;DNA binding (TAIR:AT2G16485.1); Has 2327 Blast hits to 1758 proteins in 258 species: Archae - 0; Bacteria - 308; Metazoa - 909; Fungi - 193; Plants - 493; Viruses - 18; Other Eukaryotes - 406 (source: NCBI BLink). & (gnl|cdd|37157 : 120.0) no description available & (gnl|cdd|47987 : 114.0) no description available & (reliability: 1162.0) & (original description: Putative NERD, Description = Zinc finger CCCH domain-containing protein 44, PFAM = PF03126;PF02213;PF02201)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben044scf00004219ctg004_1-2510' '(at3g51120 : 112.0) DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: histone modification, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Plus-3 domain, subgroup (InterPro:IPR018144), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), GYF (InterPro:IPR003169), SWIB/MDM2 domain (InterPro:IPR003121), Plus-3 (InterPro:IPR004343), SWIB domain (InterPro:IPR019835), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: nucleic acid binding;zinc ion binding;DNA binding (TAIR:AT2G16485.1); Has 2327 Blast hits to 1758 proteins in 258 species: Archae - 0; Bacteria - 308; Metazoa - 909; Fungi - 193; Plants - 493; Viruses - 18; Other Eukaryotes - 406 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative NERD, Description = Zinc finger CCCH domain-containing protein 44, PFAM = PF13771)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben044scf00005638ctg009_178-18051' '(at2g36720 : 547.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (TAIR:AT2G27980.1); Has 4396 Blast hits to 3645 proteins in 210 species: Archae - 0; Bacteria - 0; Metazoa - 2916; Fungi - 398; Plants - 780; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). & (reliability: 1094.0) & (original description: Putative glysoja_041038, Description = Chromodomain-helicase-DNA-binding protein 4, PFAM = PF16135;PF00628)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben044scf00008017ctg012_13360-23634' '(at5g36740 : 491.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956), A.T hook-like (InterPro:IPR020478), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G36670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 930.0) & (original description: Putative IDM1, Description = Chromodomain-helicase-DNA-binding protein 4, PFAM = PF00628;PF16135)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben044scf00010044ctg004_1-5220' '(at3g14980 : 243.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; FUNCTIONS IN: DNA binding, zinc ion binding, N-acetyltransferase activity; INVOLVED IN: regulation of transcription, DNA-dependent, metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase (InterPro:IPR000182), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT1G05380.2); Has 4644 Blast hits to 3909 proteins in 217 species: Archae - 1; Bacteria - 6; Metazoa - 3256; Fungi - 362; Plants - 697; Viruses - 0; Other Eukaryotes - 322 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative IDM1, Description = Chromodomain-helicase-DNA-binding protein 4, PFAM = PF16135)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben044scf00011642ctg012_513-5912' '(at5g12400 : 138.0) DNA binding;zinc ion binding;DNA binding; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956), DDT domain (InterPro:IPR004022), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), DDT domain superfamily (InterPro:IPR018501), DDT domain, subgroup (InterPro:IPR018500), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: PHD finger family protein (TAIR:AT5G22760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative Sb02g042000, Description = Putative uncharacterized protein Sb02g042000, PFAM = )' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben044scf00011798ctg006_649-7564' '(at2g18090 : 229.0) PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), SWIB/MDM2 domain (InterPro:IPR003121), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), GYF (InterPro:IPR003169), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding (TAIR:AT3G51120.1); Has 1270 Blast hits to 1121 proteins in 190 species: Archae - 0; Bacteria - 166; Metazoa - 513; Fungi - 60; Plants - 433; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative NERD, Description = Zinc finger CCCH domain-containing protein 44, PFAM = PF02213;PF13771)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben044scf00015133ctg005_1-10457' '(at4g14920 : 634.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT1G05380.2); Has 1402 Blast hits to 1245 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 811; Fungi - 61; Plants - 450; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 1268.0) & (original description: Putative BnaC05g03470D, Description = BnaC05g03470D protein, PFAM = PF00628;PF16135)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben044scf00021453ctg014_544-4144' '(at5g12400 : 377.0) DNA binding;zinc ion binding;DNA binding; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956), DDT domain (InterPro:IPR004022), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), DDT domain superfamily (InterPro:IPR018501), DDT domain, subgroup (InterPro:IPR018500), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: PHD finger family protein (TAIR:AT5G22760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36686 : 168.0) no description available & (reliability: 754.0) & (original description: Putative CHD, Description = Chromodomain helicase DNA binding protein, PFAM = PF02791;PF15612;PF00628)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf00058_975369-996839' '(at4g14920 : 623.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT1G05380.2); Has 1402 Blast hits to 1245 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 811; Fungi - 61; Plants - 450; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 1246.0) & (original description: Putative At4g14920, Description = Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein, PFAM = PF00628;PF16135)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf00158_400662-407285' '(at2g18090 : 229.0) PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), SWIB/MDM2 domain (InterPro:IPR003121), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), GYF (InterPro:IPR003169), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding (TAIR:AT3G51120.1); Has 1270 Blast hits to 1121 proteins in 190 species: Archae - 0; Bacteria - 166; Metazoa - 513; Fungi - 60; Plants - 433; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative NERD, Description = Zinc finger CCCH domain-containing protein 44, PFAM = PF02213;PF13771)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf00167_36796-50725' '(at4g14920 : 629.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT1G05380.2); Has 1402 Blast hits to 1245 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 811; Fungi - 61; Plants - 450; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 1258.0) & (original description: Putative IDM1, Description = Chromodomain-helicase-DNA-binding protein 4, PFAM = PF16135;PF00628)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf00288_1161922-1172644' '(at5g58610 : 639.0) PHD finger transcription factor, putative; FUNCTIONS IN: RNA binding, DNA binding, zinc ion binding; INVOLVED IN: N-terminal protein myristoylation, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT1G05380.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1278.0) & (original description: Putative PGSC0003DMG400022079, Description = RING/FYVE/PHD zinc finger protein, PFAM = PF16135;PF00628;PF05641;PF00583)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf00428_1110288-1115709' '(at1g05380 : 304.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT4G14920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 608.0) & (original description: Putative PGSC0003DMG400026258, Description = Putative ovule protein, PFAM = PF16135)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf00573_185917-194123' '(at5g58610 : 446.0) PHD finger transcription factor, putative; FUNCTIONS IN: RNA binding, DNA binding, zinc ion binding; INVOLVED IN: N-terminal protein myristoylation, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT1G05380.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 892.0) & (original description: Putative RCOM_1587400, Description = DNA binding protein, putative, PFAM = PF16135;PF05641;PF00628)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf00974_28931-40224' '(at5g61120 : 92.8) BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT5G61090.1); Has 125 Blast hits to 115 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 22; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative PGSC0003DMG400020472, Description = , PFAM = )' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf01025_508050-520656' '(at2g37520 : 842.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (TAIR:AT3G53680.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1636.0) & (original description: Putative At2g37520, Description = Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein, PFAM = PF16135;PF16135)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf01433_822590-836613' '(at3g51120 : 594.0) DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: histone modification, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Plus-3 domain, subgroup (InterPro:IPR018144), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), GYF (InterPro:IPR003169), SWIB/MDM2 domain (InterPro:IPR003121), Plus-3 (InterPro:IPR004343), SWIB domain (InterPro:IPR019835), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: nucleic acid binding;zinc ion binding;DNA binding (TAIR:AT2G16485.1); Has 2327 Blast hits to 1758 proteins in 258 species: Archae - 0; Bacteria - 308; Metazoa - 909; Fungi - 193; Plants - 493; Viruses - 18; Other Eukaryotes - 406 (source: NCBI BLink). & (gnl|cdd|37157 : 141.0) no description available & (gnl|cdd|47987 : 113.0) no description available & (reliability: 1188.0) & (original description: Putative BnaC01g23510D, Description = BnaC01g23510D protein, PFAM = PF02201;PF02213;PF03126)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf01663_174-14473' '(at5g36740 : 473.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956), A.T hook-like (InterPro:IPR020478), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G36670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 894.0) & (original description: Putative IDM1, Description = Chromodomain-helicase-DNA-binding protein 4, PFAM = PF00628;PF16135)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf02362_253305-268812' '(at5g58610 : 451.0) PHD finger transcription factor, putative; FUNCTIONS IN: RNA binding, DNA binding, zinc ion binding; INVOLVED IN: N-terminal protein myristoylation, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT1G05380.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 902.0) & (original description: Putative PGSC0003DMG400022079, Description = RING/FYVE/PHD zinc finger protein, PFAM = PF00628;PF16135;PF05641;PF00583)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf02502_1031969-1056095' '(at2g36720 : 738.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (TAIR:AT2G27980.1); Has 4396 Blast hits to 3645 proteins in 210 species: Archae - 0; Bacteria - 0; Metazoa - 2916; Fungi - 398; Plants - 780; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). & (reliability: 1476.0) & (original description: Putative At2g36720, Description = Putative PHD-type zinc finger protein, PFAM = PF00628;PF16135)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf03046_254439-281909' '(at2g36720 : 619.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (TAIR:AT2G27980.1); Has 4396 Blast hits to 3645 proteins in 210 species: Archae - 0; Bacteria - 0; Metazoa - 2916; Fungi - 398; Plants - 780; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). & (reliability: 1238.0) & (original description: Putative PGSC0003DMG400003902, Description = Chromodomain-helicase-DNA-binding protein 4, PFAM = PF16135;PF00628)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf03289_95981-109297' '(at2g27980 : 595.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (TAIR:AT2G36720.1); Has 477 Blast hits to 420 proteins in 59 species: Archae - 0; Bacteria - 2; Metazoa - 73; Fungi - 2; Plants - 374; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 1146.0) & (original description: Putative BnaC04g39410D, Description = BnaC04g39410D protein, PFAM = PF00628;PF16135;PF16135)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf05419_72430-87409' '(at4g14920 : 631.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT1G05380.2); Has 1402 Blast hits to 1245 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 811; Fungi - 61; Plants - 450; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 1262.0) & (original description: Putative At4g14920, Description = Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein, PFAM = PF16135;PF00628)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf07034_900793-919112' '(at3g51120 : 618.0) DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: histone modification, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Plus-3 domain, subgroup (InterPro:IPR018144), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), GYF (InterPro:IPR003169), SWIB/MDM2 domain (InterPro:IPR003121), Plus-3 (InterPro:IPR004343), SWIB domain (InterPro:IPR019835), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: nucleic acid binding;zinc ion binding;DNA binding (TAIR:AT2G16485.1); Has 2327 Blast hits to 1758 proteins in 258 species: Archae - 0; Bacteria - 308; Metazoa - 909; Fungi - 193; Plants - 493; Viruses - 18; Other Eukaryotes - 406 (source: NCBI BLink). & (gnl|cdd|37157 : 129.0) no description available & (gnl|cdd|47987 : 117.0) no description available & (reliability: 1236.0) & (original description: Putative BnaC01g23510D, Description = BnaC01g23510D protein, PFAM = PF03126;PF02201;PF02213)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf07441_331349-340985' '(at1g43770 : 145.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G16680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative PGSC0003DMG400032558, Description = BnaCnng34380D protein, PFAM = )' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf07690_10640-16974' '(at1g43770 : 101.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G16680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative 3AF1, Description = 3AF1 protein, PFAM = PF02892;PF02892)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf11860_1-8853' '(at5g58610 : 444.0) PHD finger transcription factor, putative; FUNCTIONS IN: RNA binding, DNA binding, zinc ion binding; INVOLVED IN: N-terminal protein myristoylation, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT1G05380.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 888.0) & (original description: Putative PGSC0003DMG400022079, Description = RING/FYVE/PHD zinc finger protein, PFAM = PF00628;PF05641;PF16135)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf13103_167654-192836' '(at3g51120 : 593.0) DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: histone modification, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Plus-3 domain, subgroup (InterPro:IPR018144), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), GYF (InterPro:IPR003169), SWIB/MDM2 domain (InterPro:IPR003121), Plus-3 (InterPro:IPR004343), SWIB domain (InterPro:IPR019835), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: nucleic acid binding;zinc ion binding;DNA binding (TAIR:AT2G16485.1); Has 2327 Blast hits to 1758 proteins in 258 species: Archae - 0; Bacteria - 308; Metazoa - 909; Fungi - 193; Plants - 493; Viruses - 18; Other Eukaryotes - 406 (source: NCBI BLink). & (gnl|cdd|37157 : 119.0) no description available & (gnl|cdd|47987 : 110.0) no description available & (reliability: 1186.0) & (original description: Putative BnaC01g23510D, Description = BnaC01g23510D protein, PFAM = PF02201;PF02213;PF03126)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf13103_177456-192677' '(at3g51120 : 414.0) DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: histone modification, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Plus-3 domain, subgroup (InterPro:IPR018144), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), GYF (InterPro:IPR003169), SWIB/MDM2 domain (InterPro:IPR003121), Plus-3 (InterPro:IPR004343), SWIB domain (InterPro:IPR019835), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: nucleic acid binding;zinc ion binding;DNA binding (TAIR:AT2G16485.1); Has 2327 Blast hits to 1758 proteins in 258 species: Archae - 0; Bacteria - 308; Metazoa - 909; Fungi - 193; Plants - 493; Viruses - 18; Other Eukaryotes - 406 (source: NCBI BLink). & (gnl|cdd|37157 : 117.0) no description available & (gnl|cdd|47987 : 110.0) no description available & (reliability: 828.0) & (original description: Putative NERD, Description = Zinc finger CCCH domain-containing protein 44, PFAM = PF02201;PF03126;PF02213)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf13478_17979-23544' '(at5g22260 : 642.0) Sporophytic factor controlling anther and pollen development. Mutants fail to make functional pollen;pollen degeneration occurs after microspore release and the tapetum also appears abnormally vacuolated. Similar to PHD-finger motif transcription factors.; male sterility 1 (MS1); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G66170.1); Has 884 Blast hits to 874 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 282; Fungi - 312; Plants - 261; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|37055 : 128.0) no description available & (reliability: 1284.0) & (original description: Putative MS1, Description = PHD finger protein MALE STERILITY 1, PFAM = PF00628)' T '27.3.63' 'RNA.regulation of transcription.PHD finger transcription factor' 'niben101scf15694_81217-85938' '(at3g53680 : 245.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (TAIR:AT2G37520.1); Has 3364 Blast hits to 2813 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 239; Plants - 706; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (reliability: 490.0) & (original description: Putative TCM_040248, Description = Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain, putative, PFAM = )' T '27.3.64' 'RNA.regulation of transcription.PHOR1' 'nbv0.3scaffold63629_6776-10000' '(at3g19380 : 136.0) plant U-box 25 (PUB25); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 26 (TAIR:AT1G49780.1); Has 2521 Blast hits to 2449 proteins in 133 species: Archae - 0; Bacteria - 22; Metazoa - 177; Fungi - 24; Plants - 2091; Viruses - 3; Other Eukaryotes - 204 (source: NCBI BLink). & (q64ha9|spl11_orysa : 97.1) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 89.5) no description available & (reliability: 272.0) & (original description: Putative Sb06g017230, Description = Putative uncharacterized protein Sb06g017230, PFAM = PF04564)' T '27.3.64' 'RNA.regulation of transcription.PHOR1' 'nbv0.3scaffold80838_3874-6992' '(at5g64660 : 324.0) "CYS, MET, PRO, and GLY protein 2" (CMPG2); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G09800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 94.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 85.3) no description available & (reliability: 648.0) & (original description: Putative PUB27, Description = U-box domain-containing protein 27, PFAM = PF04564)' T '27.3.64' 'RNA.regulation of transcription.PHOR1' 'nbv0.5scaffold631_133575-189733' '(at3g18710 : 142.0) Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays.; plant U-box 29 (PUB29); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: response to chitin, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G09800.1); Has 1922 Blast hits to 1905 proteins in 98 species: Archae - 0; Bacteria - 12; Metazoa - 142; Fungi - 0; Plants - 1653; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative PUB27, Description = U-box domain-containing protein 28, PFAM = )' T '27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben044scf00000152ctg011_19325-22736' '(at3g49810 : 532.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G65920.1); Has 2157 Blast hits to 2086 proteins in 103 species: Archae - 0; Bacteria - 14; Metazoa - 79; Fungi - 29; Plants - 1932; Viruses - 3; Other Eukaryotes - 100 (source: NCBI BLink). & (q64ha9|spl11_orysa : 106.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 93.8) no description available & (reliability: 1064.0) & (original description: Putative PUB31, Description = U-box domain-containing protein 31, PFAM = PF04564;PF05804)' T '27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben044scf00030690ctg007_6002-9551' '(at2g35930 : 196.0) Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.; plant U-box 23 (PUB23); CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 22 (TAIR:AT3G52450.1); Has 2501 Blast hits to 2466 proteins in 187 species: Archae - 0; Bacteria - 34; Metazoa - 243; Fungi - 89; Plants - 1910; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink). & (q64ha9|spl11_orysa : 83.6) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 392.0) & (original description: Putative Os04g0589700, Description = OSJNBa0086O06.11 protein, PFAM = PF04564)' T '27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben044scf00047250ctg000_253-3566' '(at5g37490 : 341.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: CYS, MET, PRO, and GLY protein 1 (TAIR:AT1G66160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 109.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 91.1) no description available & (reliability: 682.0) & (original description: Putative PUB21, Description = U-box domain-containing protein 21, PFAM = PF04564)' T '27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf00165_320458-323678' '(at2g35930 : 445.0) Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.; plant U-box 23 (PUB23); CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 22 (TAIR:AT3G52450.1); Has 2501 Blast hits to 2466 proteins in 187 species: Archae - 0; Bacteria - 34; Metazoa - 243; Fungi - 89; Plants - 1910; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink). & (q64ha9|spl11_orysa : 105.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 90.7) no description available & (reliability: 890.0) & (original description: Putative PUB23, Description = E3 ubiquitin-protein ligase PUB23, PFAM = PF04564)' T '27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf00165_446365-449621' '(at3g11840 : 322.0) Encodes a U-box-domain-containing E3 ubiquitin ligase that acts as a negative regulator of PAMP-triggered immunity.; plant U-box 24 (PUB24); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: respiratory burst involved in defense response, protein autoubiquitination, response to chitin, defense response; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 23 (TAIR:AT2G35930.1); Has 2348 Blast hits to 2308 proteins in 197 species: Archae - 0; Bacteria - 24; Metazoa - 273; Fungi - 129; Plants - 1697; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink). & (q64ha9|spl11_orysa : 92.8) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 80.3) no description available & (reliability: 644.0) & (original description: Putative PUB24, Description = E3 ubiquitin-protein ligase PUB24, PFAM = PF04564)' T '27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf00851_227205-230909' '(at2g35930 : 306.0) Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.; plant U-box 23 (PUB23); CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 22 (TAIR:AT3G52450.1); Has 2501 Blast hits to 2466 proteins in 187 species: Archae - 0; Bacteria - 34; Metazoa - 243; Fungi - 89; Plants - 1910; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink). & (q64ha9|spl11_orysa : 83.2) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 612.0) & (original description: Putative PUB23, Description = E3 ubiquitin-protein ligase PUB23, PFAM = PF04564)' T '27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf00927_851350-854681' '(at5g37490 : 287.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: CYS, MET, PRO, and GLY protein 1 (TAIR:AT1G66160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 110.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 93.0) no description available & (reliability: 574.0) & (original description: Putative ACRE74, Description = Avr9/Cf-9 rapidly elicited protein 74, PFAM = PF04564)' T '27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf00984_936748-940082' '(at5g37490 : 267.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: CYS, MET, PRO, and GLY protein 1 (TAIR:AT1G66160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 112.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 91.5) no description available & (reliability: 534.0) & (original description: Putative CMPG, Description = CMPG, PFAM = PF04564)' T '27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf01795_907057-910370' '(at5g37490 : 367.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: CYS, MET, PRO, and GLY protein 1 (TAIR:AT1G66160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 118.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 91.8) no description available & (reliability: 734.0) & (original description: Putative PUB21, Description = U-box domain-containing protein 21, PFAM = PF04564)' T '27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf02936_85358-88769' '(at3g49810 : 531.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G65920.1); Has 2157 Blast hits to 2086 proteins in 103 species: Archae - 0; Bacteria - 14; Metazoa - 79; Fungi - 29; Plants - 1932; Viruses - 3; Other Eukaryotes - 100 (source: NCBI BLink). & (q64ha9|spl11_orysa : 106.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 94.2) no description available & (reliability: 1062.0) & (original description: Putative PUB31, Description = U-box domain-containing protein 31, PFAM = PF05804;PF04564)' T '27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf03915_5616-8839' '(at1g49780 : 131.0) plant U-box 26 (PUB26); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 25 (TAIR:AT3G19380.1); Has 2464 Blast hits to 2403 proteins in 144 species: Archae - 0; Bacteria - 20; Metazoa - 134; Fungi - 16; Plants - 2081; Viruses - 0; Other Eukaryotes - 213 (source: NCBI BLink). & (q64ha9|spl11_orysa : 98.6) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 92.6) no description available & (reliability: 262.0) & (original description: Putative Sb06g017230, Description = Putative uncharacterized protein Sb06g017230, PFAM = PF04564)' T '27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf04418_703799-707019' '(at3g11840 : 320.0) Encodes a U-box-domain-containing E3 ubiquitin ligase that acts as a negative regulator of PAMP-triggered immunity.; plant U-box 24 (PUB24); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: respiratory burst involved in defense response, protein autoubiquitination, response to chitin, defense response; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 23 (TAIR:AT2G35930.1); Has 2348 Blast hits to 2308 proteins in 197 species: Archae - 0; Bacteria - 24; Metazoa - 273; Fungi - 129; Plants - 1697; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink). & (q64ha9|spl11_orysa : 89.4) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 88.4) no description available & (reliability: 640.0) & (original description: Putative PUB24, Description = E3 ubiquitin-protein ligase PUB24, PFAM = PF04564)' T '27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf04418_797284-800492' '(at2g35930 : 440.0) Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.; plant U-box 23 (PUB23); CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 22 (TAIR:AT3G52450.1); Has 2501 Blast hits to 2466 proteins in 187 species: Archae - 0; Bacteria - 34; Metazoa - 243; Fungi - 89; Plants - 1910; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink). & (q64ha9|spl11_orysa : 129.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 92.2) no description available & (reliability: 880.0) & (original description: Putative PUB23, Description = E3 ubiquitin-protein ligase PUB23, PFAM = PF04564)' T '27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf04699_218250-221518' '(at2g35930 : 397.0) Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.; plant U-box 23 (PUB23); CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 22 (TAIR:AT3G52450.1); Has 2501 Blast hits to 2466 proteins in 187 species: Archae - 0; Bacteria - 34; Metazoa - 243; Fungi - 89; Plants - 1910; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink). & (q64ha9|spl11_orysa : 101.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 85.7) no description available & (reliability: 794.0) & (original description: Putative PUB23, Description = E3 ubiquitin-protein ligase PUB23, PFAM = PF04564)' T '27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf07278_257674-260921' '(at3g19380 : 451.0) plant U-box 25 (PUB25); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 26 (TAIR:AT1G49780.1); Has 2521 Blast hits to 2449 proteins in 133 species: Archae - 0; Bacteria - 22; Metazoa - 177; Fungi - 24; Plants - 2091; Viruses - 3; Other Eukaryotes - 204 (source: NCBI BLink). & (q64ha9|spl11_orysa : 107.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 98.8) no description available & (reliability: 902.0) & (original description: Putative PUB25, Description = U-box domain-containing protein 25, PFAM = PF04564)' T '27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf07482_152751-156034' '(at2g35930 : 192.0) Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.; plant U-box 23 (PUB23); CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 22 (TAIR:AT3G52450.1); Has 2501 Blast hits to 2466 proteins in 187 species: Archae - 0; Bacteria - 34; Metazoa - 243; Fungi - 89; Plants - 1910; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink). & (q64ha9|spl11_orysa : 80.9) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 384.0) & (original description: Putative Os04g0589700, Description = OSJNBa0086O06.11 protein, PFAM = PF04564)' T '27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf07482_152850-156059' '(at2g35930 : 178.0) Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.; plant U-box 23 (PUB23); CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 22 (TAIR:AT3G52450.1); Has 2501 Blast hits to 2466 proteins in 187 species: Archae - 0; Bacteria - 34; Metazoa - 243; Fungi - 89; Plants - 1910; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative Ccrd_021183, Description = Armadillo-like helical, PFAM = PF04564)' T '27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf08855_264814-268163' '(at5g37490 : 304.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: CYS, MET, PRO, and GLY protein 1 (TAIR:AT1G66160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 130.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 89.1) no description available & (reliability: 608.0) & (original description: Putative PUB21, Description = U-box domain-containing protein 21, PFAM = PF04564)' T '27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf19133_1928-5187' '(at5g64660 : 255.0) "CYS, MET, PRO, and GLY protein 2" (CMPG2); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G09800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 98.6) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 86.4) no description available & (reliability: 510.0) & (original description: Putative PUB27, Description = U-box domain-containing protein 27, PFAM = PF04564)' T '27.3.64' 'RNA.regulation of transcription.PHOR1' 'niben101scf33026_15397-18656' '(at5g64660 : 326.0) "CYS, MET, PRO, and GLY protein 2" (CMPG2); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G09800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 95.9) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 86.8) no description available & (reliability: 652.0) & (original description: Putative PUB27, Description = U-box domain-containing protein 27, PFAM = PF04564)' T '27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'nbv0.3scaffold435_38236-91233' '(at1g79020 : 120.0) Enhancer of polycomb-like transcription factor protein; CONTAINS InterPro DOMAIN/s: Enhancer of polycomb-like (InterPro:IPR019542); BEST Arabidopsis thaliana protein match is: Enhancer of polycomb-like transcription factor protein (TAIR:AT1G16690.1); Has 409 Blast hits to 407 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 106; Plants - 67; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative epl101, Description = Enhancer of polycomb-like protein, PFAM = )' T '27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'nbv0.3scaffold435_87952-93321' '(at1g16690 : 259.0) Enhancer of polycomb-like transcription factor protein; CONTAINS InterPro DOMAIN/s: Enhancer of polycomb-like (InterPro:IPR019542); BEST Arabidopsis thaliana protein match is: Enhancer of polycomb-like transcription factor protein (TAIR:AT1G79020.1); Has 400 Blast hits to 400 proteins in 158 species: Archae - 0; Bacteria - 0; Metazoa - 185; Fungi - 95; Plants - 75; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|37472 : 104.0) no description available & (reliability: 518.0) & (original description: Putative epl101, Description = Enhancer of polycomb-like protein, PFAM = )' T '27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'nbv0.3scaffold37638_11188-20606' '(at2g10950 : 137.0) BSD domain-containing protein; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT3G49800.1); Has 187 Blast hits to 175 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 28; Fungi - 3; Plants - 134; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative , Description = , PFAM = PF03909)' T '27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'nbv0.3scaffold44594_788-9524' '(at3g20740 : 508.0) Encodes a protein similar to the transcriptional regular of the animal Polycomb group and is involved in regulation of establishment of anterior-posterior polar axis in the endosperm and repression of flowering during vegetative phase. Mutation leads endosperm to develop in the absence of fertilization and flowers to form in seedlings and non-reproductive organs. Also exhibits maternal effect gametophytic lethal phenotype, which is suppressed by hypomethylation. Forms part of a large protein complex that can include VRN2 (VERNALIZATION 2), VIN3 (VERNALIZATION INSENSITIVE 3) and polycomb group proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE), CURLY LEAF (CLF) and SWINGER (SWN or EZA1). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization. In the ovule, the FIE transcript levels increase transiently just after fertilization.; FERTILIZATION-INDEPENDENT ENDOSPERM (FIE); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: structural molecules (TAIR:AT1G79990.1); Has 16392 Blast hits to 11301 proteins in 524 species: Archae - 16; Bacteria - 2767; Metazoa - 5614; Fungi - 4038; Plants - 1850; Viruses - 0; Other Eukaryotes - 2107 (source: NCBI BLink). & (q8vzy6|fie2_maize : 496.0) Polycomb group protein FIE2 (FERTILIZATION-INDEPENDENT ENDOSPERM 2) - Zea mays (Maize) & (gnl|cdd|36252 : 314.0) no description available & (gnl|cdd|29257 : 92.0) no description available & (reliability: 1016.0) & (original description: Putative FIE, Description = Polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM, PFAM = PF00400;PF00400)' T '27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'nbv0.3scaffold73063_4916-8617' '(at4g02020 : 105.0) Encodes a polycomb group protein. Forms part of a large protein complex that can include VRN2 (VERNALIZATION 2), VIN3 (VERNALIZATION INSENSITIVE 3) and polycomb group proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE) and CURLY LEAF (CLF). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization. Performs a partially redundant role to MEA in controlling seed initiation by helping to suppress central cell nucleusendosperm proliferation within the FG.; SWINGER (SWN); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain-containing protein (TAIR:AT2G23380.1); Has 5041 Blast hits to 4734 proteins in 465 species: Archae - 0; Bacteria - 399; Metazoa - 2132; Fungi - 472; Plants - 1030; Viruses - 0; Other Eukaryotes - 1008 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative EZ1, Description = CURLY LEAF-like 1, PFAM = )' T '27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'nbv0.5scaffold1097_327024-332393' '(at1g16690 : 224.0) Enhancer of polycomb-like transcription factor protein; CONTAINS InterPro DOMAIN/s: Enhancer of polycomb-like (InterPro:IPR019542); BEST Arabidopsis thaliana protein match is: Enhancer of polycomb-like transcription factor protein (TAIR:AT1G79020.1); Has 400 Blast hits to 400 proteins in 158 species: Archae - 0; Bacteria - 0; Metazoa - 185; Fungi - 95; Plants - 75; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|37472 : 82.8) no description available & (reliability: 448.0) & (original description: Putative epl101, Description = Enhancer of polycomb-like protein, PFAM = )' T '27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'nbv0.5scaffold3093_30784-36106' '(at5g51230 : 152.0) Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Forms a complex with FIE, CLF, and MSI1. This complex modulates the expression of target genes including AG, PI and AP3.; EMBRYONIC FLOWER 2 (EMF2); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Polycomb protein, VEFS-Box (InterPro:IPR019135); BEST Arabidopsis thaliana protein match is: VEFS-Box of polycomb protein (TAIR:AT4G16845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative EMF2, Description = Polycomb group protein EMBRYONIC FLOWER 2, PFAM = )' T '27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'niben044scf00018891ctg005_915-3485' '(at3g49800 : 139.0) BSD domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT5G65910.1); Has 225 Blast hits to 208 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 3; Plants - 201; Viruses - 2; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative Sb03g035640, Description = Putative uncharacterized protein Sb03g035640, PFAM = )' T '27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'niben101scf00174_10145-32999' '(q8vzy6|fie2_maize : 623.0) Polycomb group protein FIE2 (FERTILIZATION-INDEPENDENT ENDOSPERM 2) - Zea mays (Maize) & (at3g20740 : 617.0) Encodes a protein similar to the transcriptional regular of the animal Polycomb group and is involved in regulation of establishment of anterior-posterior polar axis in the endosperm and repression of flowering during vegetative phase. Mutation leads endosperm to develop in the absence of fertilization and flowers to form in seedlings and non-reproductive organs. Also exhibits maternal effect gametophytic lethal phenotype, which is suppressed by hypomethylation. Forms part of a large protein complex that can include VRN2 (VERNALIZATION 2), VIN3 (VERNALIZATION INSENSITIVE 3) and polycomb group proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE), CURLY LEAF (CLF) and SWINGER (SWN or EZA1). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization. In the ovule, the FIE transcript levels increase transiently just after fertilization.; FERTILIZATION-INDEPENDENT ENDOSPERM (FIE); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: structural molecules (TAIR:AT1G79990.1); Has 16392 Blast hits to 11301 proteins in 524 species: Archae - 16; Bacteria - 2767; Metazoa - 5614; Fungi - 4038; Plants - 1850; Viruses - 0; Other Eukaryotes - 2107 (source: NCBI BLink). & (gnl|cdd|36252 : 423.0) no description available & (gnl|cdd|29257 : 97.8) no description available & (reliability: 1234.0) & (original description: Putative FIE, Description = Polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM, PFAM = PF00400;PF00400)' T '27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'niben101scf01353_184398-205720' '(at4g02020 : 802.0) Encodes a polycomb group protein. Forms part of a large protein complex that can include VRN2 (VERNALIZATION 2), VIN3 (VERNALIZATION INSENSITIVE 3) and polycomb group proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE) and CURLY LEAF (CLF). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization. Performs a partially redundant role to MEA in controlling seed initiation by helping to suppress central cell nucleusendosperm proliferation within the FG.; SWINGER (SWN); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain-containing protein (TAIR:AT2G23380.1); Has 5041 Blast hits to 4734 proteins in 465 species: Archae - 0; Bacteria - 399; Metazoa - 2132; Fungi - 472; Plants - 1030; Viruses - 0; Other Eukaryotes - 1008 (source: NCBI BLink). & (q8s4p4|ez3_maize : 529.0) Polycomb protein EZ3 (Enhancer of zeste protein 3) - Zea mays (Maize) & (gnl|cdd|36295 : 513.0) no description available & (gnl|cdd|47645 : 118.0) no description available & (reliability: 1604.0) & (original description: Putative EZA1, Description = Histone-lysine N-methyltransferase EZA1, PFAM = PF00856)' T '27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'niben101scf01933_738180-743934' '(at5g65910 : 240.0) BSD domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT3G49800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 480.0) & (original description: Putative bsd, Description = BSD domain containing protein, expressed, PFAM = PF03909)' T '27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'niben101scf02212_231748-258349' '(at5g51230 : 662.0) Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Forms a complex with FIE, CLF, and MSI1. This complex modulates the expression of target genes including AG, PI and AP3.; EMBRYONIC FLOWER 2 (EMF2); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Polycomb protein, VEFS-Box (InterPro:IPR019135); BEST Arabidopsis thaliana protein match is: VEFS-Box of polycomb protein (TAIR:AT4G16845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37561 : 225.0) no description available & (reliability: 1324.0) & (original description: Putative EMF2, Description = Polycomb group protein EMBRYONIC FLOWER 2, PFAM = PF09733)' T '27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'niben101scf02212_238116-245633' '(at5g51230 : 171.0) Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Forms a complex with FIE, CLF, and MSI1. This complex modulates the expression of target genes including AG, PI and AP3.; EMBRYONIC FLOWER 2 (EMF2); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Polycomb protein, VEFS-Box (InterPro:IPR019135); BEST Arabidopsis thaliana protein match is: VEFS-Box of polycomb protein (TAIR:AT4G16845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative EMF2, Description = Polycomb group protein EMBRYONIC FLOWER 2, PFAM = )' T '27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'niben101scf04500_67677-90151' '(at5g51230 : 635.0) Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Forms a complex with FIE, CLF, and MSI1. This complex modulates the expression of target genes including AG, PI and AP3.; EMBRYONIC FLOWER 2 (EMF2); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Polycomb protein, VEFS-Box (InterPro:IPR019135); BEST Arabidopsis thaliana protein match is: VEFS-Box of polycomb protein (TAIR:AT4G16845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37561 : 228.0) no description available & (reliability: 1270.0) & (original description: Putative EMF2, Description = Polycomb group protein EMBRYONIC FLOWER 2, PFAM = PF09733)' T '27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'niben101scf07652_171305-176674' '(at1g16690 : 214.0) Enhancer of polycomb-like transcription factor protein; CONTAINS InterPro DOMAIN/s: Enhancer of polycomb-like (InterPro:IPR019542); BEST Arabidopsis thaliana protein match is: Enhancer of polycomb-like transcription factor protein (TAIR:AT1G79020.1); Has 400 Blast hits to 400 proteins in 158 species: Archae - 0; Bacteria - 0; Metazoa - 185; Fungi - 95; Plants - 75; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|37472 : 84.7) no description available & (reliability: 428.0) & (original description: Putative epl101, Description = Enhancer of polycomb-like protein, PFAM = )' T '27.3.65' 'RNA.regulation of transcription.Polycomb Group (PcG)' 'niben101scf08330_49925-76047' '(at5g51230 : 645.0) Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Forms a complex with FIE, CLF, and MSI1. This complex modulates the expression of target genes including AG, PI and AP3.; EMBRYONIC FLOWER 2 (EMF2); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Polycomb protein, VEFS-Box (InterPro:IPR019135); BEST Arabidopsis thaliana protein match is: VEFS-Box of polycomb protein (TAIR:AT4G16845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37561 : 225.0) no description available & (reliability: 1290.0) & (original description: Putative EMF2, Description = Polycomb group protein EMBRYONIC FLOWER 2, PFAM = PF09733)' T '27.3.66' 'RNA.regulation of transcription.Psudo ARR transcription factor family' 'nbv0.5scaffold1497_154455-177096' '(at5g02810 : 342.0) PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR7 expression levels. Acts as transcriptional repressor of CCA1 and LHY.; pseudo-response regulator 7 (PRR7); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: pseudo-response regulator 3 (TAIR:AT5G60100.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q689g8|prr37_orysa : 315.0) Two-component response regulator-like PRR37 (Pseudo-response regulator 37) (OsPRR37) - Oryza sativa (Rice) & (gnl|cdd|47754 : 96.9) no description available & (reliability: 684.0) & (original description: Putative APRR7, Description = Two-component response regulator-like APRR7, PFAM = PF00072)' T '27.3.66' 'RNA.regulation of transcription.Psudo ARR transcription factor family' 'nbv0.5scaffold2058_122884-130638' '(at4g18020 : 363.0) Encodes pseudo-response regulator 2 (APRR2) that interacts with a calcium sensor (CML9).; APRR2; CONTAINS InterPro DOMAIN/s: Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GBF's pro-rich region-interacting factor 1 (TAIR:AT2G20570.1). & (reliability: 726.0) & (original description: Putative APRR2, Description = Two-component response regulator-like APRR2, PFAM = PF00072;PF00249)' T '27.3.66' 'RNA.regulation of transcription.Psudo ARR transcription factor family' 'niben044scf00010384ctg007_5282-22858' '(q689g6|prr95_orysa : 247.0) Two-component response regulator-like PRR95 (Pseudo-response regulator 95) (OsPRR95) - Oryza sativa (Rice) & (at5g24470 : 228.0) Encodes a pseudo-response regulator whose mutation affects various circadian-associated biological events such as flowering time in the long-day photoperiod conditions, red light sensitivity of seedlings during early photomorphogenesis, and the period of free-running rhythms of certain clock-controlled genes including CCA1 and APRR1/TOC1 in constant white light. Acts as transcriptional repressor of CCA1 and LHY.; pseudo-response regulator 5 (PRR5); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: pseudo-response regulator 9 (TAIR:AT2G46790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84491 : 99.5) no description available & (reliability: 456.0) & (original description: Putative BTC1, Description = Pseudo-response regulator, PFAM = PF00072;PF06203)' T '27.3.66' 'RNA.regulation of transcription.Psudo ARR transcription factor family' 'niben044scf00010384ctg007_5310-12386' '(q689g6|prr95_orysa : 244.0) Two-component response regulator-like PRR95 (Pseudo-response regulator 95) (OsPRR95) - Oryza sativa (Rice) & (at5g24470 : 223.0) Encodes a pseudo-response regulator whose mutation affects various circadian-associated biological events such as flowering time in the long-day photoperiod conditions, red light sensitivity of seedlings during early photomorphogenesis, and the period of free-running rhythms of certain clock-controlled genes including CCA1 and APRR1/TOC1 in constant white light. Acts as transcriptional repressor of CCA1 and LHY.; pseudo-response regulator 5 (PRR5); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: pseudo-response regulator 9 (TAIR:AT2G46790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84491 : 99.5) no description available & (reliability: 446.0) & (original description: Putative DR11, Description = Pseudo-response regulator, PFAM = PF06203;PF00072)' T '27.3.66' 'RNA.regulation of transcription.Psudo ARR transcription factor family' 'niben044scf00028090ctg009_1-6627' '(at5g24470 : 298.0) Encodes a pseudo-response regulator whose mutation affects various circadian-associated biological events such as flowering time in the long-day photoperiod conditions, red light sensitivity of seedlings during early photomorphogenesis, and the period of free-running rhythms of certain clock-controlled genes including CCA1 and APRR1/TOC1 in constant white light. Acts as transcriptional repressor of CCA1 and LHY.; pseudo-response regulator 5 (PRR5); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: pseudo-response regulator 9 (TAIR:AT2G46790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q689g6|prr95_orysa : 284.0) Two-component response regulator-like PRR95 (Pseudo-response regulator 95) (OsPRR95) - Oryza sativa (Rice) & (gnl|cdd|47754 : 96.9) no description available & (reliability: 596.0) & (original description: Putative APRR5, Description = Two-component response regulator-like APRR5, PFAM = PF00072)' T '27.3.66' 'RNA.regulation of transcription.Psudo ARR transcription factor family' 'niben044scf00038658ctg002_579-8049' '(at4g18020 : 359.0) Encodes pseudo-response regulator 2 (APRR2) that interacts with a calcium sensor (CML9).; APRR2; CONTAINS InterPro DOMAIN/s: Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GBF's pro-rich region-interacting factor 1 (TAIR:AT2G20570.1). & (reliability: 718.0) & (original description: Putative APRR2, Description = Two-component response regulator-like APRR2, PFAM = PF00249;PF00072)' T '27.3.66' 'RNA.regulation of transcription.Psudo ARR transcription factor family' 'niben101scf00225_487795-494580' '(q689g6|prr95_orysa : 321.0) Two-component response regulator-like PRR95 (Pseudo-response regulator 95) (OsPRR95) - Oryza sativa (Rice) & (at5g24470 : 267.0) Encodes a pseudo-response regulator whose mutation affects various circadian-associated biological events such as flowering time in the long-day photoperiod conditions, red light sensitivity of seedlings during early photomorphogenesis, and the period of free-running rhythms of certain clock-controlled genes including CCA1 and APRR1/TOC1 in constant white light. Acts as transcriptional repressor of CCA1 and LHY.; pseudo-response regulator 5 (PRR5); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: pseudo-response regulator 9 (TAIR:AT2G46790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47754 : 98.8) no description available & (reliability: 534.0) & (original description: Putative PRR5, Description = Pseudo-response regulator 5, PFAM = PF00072;PF06203)' T '27.3.66' 'RNA.regulation of transcription.Psudo ARR transcription factor family' 'niben101scf00294_419756-433171' '(at5g02810 : 318.0) PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR7 expression levels. Acts as transcriptional repressor of CCA1 and LHY.; pseudo-response regulator 7 (PRR7); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: pseudo-response regulator 3 (TAIR:AT5G60100.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q689g4|prr73_orysa : 317.0) Two-component response regulator-like PRR73 (Pseudo-response regulator 73) (OsPRR73) - Oryza sativa (Rice) & (gnl|cdd|47754 : 101.0) no description available & (reliability: 636.0) & (original description: Putative APRR7, Description = Two-component response regulator-like APRR7, PFAM = PF00072)' T '27.3.66' 'RNA.regulation of transcription.Psudo ARR transcription factor family' 'niben101scf02827_847850-856176' '(at4g18020 : 362.0) Encodes pseudo-response regulator 2 (APRR2) that interacts with a calcium sensor (CML9).; APRR2; CONTAINS InterPro DOMAIN/s: Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GBF's pro-rich region-interacting factor 1 (TAIR:AT2G20570.1). & (reliability: 724.0) & (original description: Putative APRR2, Description = Two-component response regulator-like APRR2, PFAM = PF00072;PF00249)' T '27.3.66' 'RNA.regulation of transcription.Psudo ARR transcription factor family' 'niben101scf05009_442223-459688' '(q689g8|prr37_orysa : 344.0) Two-component response regulator-like PRR37 (Pseudo-response regulator 37) (OsPRR37) - Oryza sativa (Rice) & (at5g02810 : 303.0) PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR7 expression levels. Acts as transcriptional repressor of CCA1 and LHY.; pseudo-response regulator 7 (PRR7); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: pseudo-response regulator 3 (TAIR:AT5G60100.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47754 : 93.8) no description available & (reliability: 606.0) & (original description: Putative PRR37, Description = Two-component response regulator-like PRR37, PFAM = PF06203;PF00072)' T '27.3.66' 'RNA.regulation of transcription.Psudo ARR transcription factor family' 'niben101scf11469_26089-33446' '(at5g61380 : 460.0) Pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. PRR3 may increase the stability of TOC1 by preventing interactions between TOC1 and the F-box protein ZTL. Expression of TOC1 is correlated with rhythmic changes in chromatin organization.; TIMING OF CAB EXPRESSION 1 (TOC1); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: pseudo-response regulator 3 (TAIR:AT5G60100.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q689g9|prr1_orysa : 382.0) Two-component response regulator-like PRR1 (Pseudo-response regulator 1) (OsPRR1) - Oryza sativa (Rice) & (reliability: 920.0) & (original description: Putative toc1, Description = TOC1, PFAM = PF06203;PF00072)' T '27.3.66' 'RNA.regulation of transcription.Psudo ARR transcription factor family' 'niben101scf11685_108399-116231' '(at4g18020 : 352.0) Encodes pseudo-response regulator 2 (APRR2) that interacts with a calcium sensor (CML9).; APRR2; CONTAINS InterPro DOMAIN/s: Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GBF's pro-rich region-interacting factor 1 (TAIR:AT2G20570.1). & (reliability: 704.0) & (original description: Putative glk1, Description = Two-component response regulator-like APRR2, PFAM = PF00249;PF00072)' T '27.3.66' 'RNA.regulation of transcription.Psudo ARR transcription factor family' 'niben101scf12314_24672-28075' '(at5g61380 : 144.0) Pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. PRR3 may increase the stability of TOC1 by preventing interactions between TOC1 and the F-box protein ZTL. Expression of TOC1 is correlated with rhythmic changes in chromatin organization.; TIMING OF CAB EXPRESSION 1 (TOC1); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: pseudo-response regulator 3 (TAIR:AT5G60100.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q689g9|prr1_orysa : 119.0) Two-component response regulator-like PRR1 (Pseudo-response regulator 1) (OsPRR1) - Oryza sativa (Rice) & (reliability: 288.0) & (original description: Putative prr1, Description = TOC1, PFAM = PF00072)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold532_139734-146633' '(at5g46640 : 139.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G17950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86345 : 124.0) no description available & (reliability: 278.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold1366_47659-62093' '(at4g12750 : 720.0) Homeodomain-like transcriptional regulator; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), DDT domain (InterPro:IPR004022), DDT domain, subgroup (InterPro:IPR018500), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G44180.1); Has 164 Blast hits to 146 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 152; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 1440.0) & (original description: Putative RLT3, Description = Homeobox-DDT domain protein RLT3, PFAM = PF15612;PF02791;PF15613)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold1916_58184-67455' '(at1g23230 : 137.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629). & (reliability: 274.0) & (original description: Putative MED23, Description = Mediator of RNA polymerase II transcription subunit 23, PFAM = )' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold2440_76960-81661' '(at1g75560 : 223.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: cold shock domain protein 1 (TAIR:AT4G36020.1); Has 19425 Blast hits to 13089 proteins in 377 species: Archae - 0; Bacteria - 14; Metazoa - 2237; Fungi - 1342; Plants - 858; Viruses - 14254; Other Eukaryotes - 720 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative pco105342b, Description = DNA-binding protein HEXBP, PFAM = PF13917;PF00098;PF00098;PF00098;PF00098;PF00098;PF00098;PF00098;PF00098)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold4035_33108-43606' '(at1g72650 : 286.0) Arabidopsis thaliana myb family transcription factor (At1g72650); TRF-like 6 (TRFL6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to cadmium ion, response to salt stress; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 3 (TAIR:AT1G17460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 572.0) & (original description: Putative MYB30, Description = Telomere repeat-binding factor like-protein, PFAM = PF00249)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold4373_53110-60509' '(at3g58470 : 292.0) nucleic acid binding;methyltransferases; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, eukaryotic (InterPro:IPR019369), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052); Has 287 Blast hits to 287 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 79; Plants - 48; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|38560 : 219.0) no description available & (reliability: 584.0) & (original description: Putative N6AMT2, Description = Protein-lysine N-methyltransferase N6AMT2, PFAM = PF10237)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold5512_49857-57135' '(gnl|cdd|37778 : 187.0) no description available & (at1g76010 : 176.0) Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein (InterPro:IPR002775); BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein (TAIR:AT1G20220.1); Has 82924 Blast hits to 30623 proteins in 1819 species: Archae - 80; Bacteria - 18988; Metazoa - 40987; Fungi - 4955; Plants - 6789; Viruses - 861; Other Eukaryotes - 10264 (source: NCBI BLink). & (gnl|cdd|85767 : 83.3) no description available & (reliability: 352.0) & (original description: Putative umc1204, Description = DNA/RNA-binding protein Alba-like protein, PFAM = PF01918)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold5513_1-7076' '(at5g46640 : 138.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G17950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86345 : 133.0) no description available & (reliability: 276.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold6999_48260-51931' '(at1g10200 : 296.0) WLIM1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1); Has 4354 Blast hits to 2727 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 3462; Fungi - 43; Plants - 506; Viruses - 0; Other Eukaryotes - 343 (source: NCBI BLink). & (p29675|sf3_helan : 265.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 161.0) no description available & (reliability: 592.0) & (original description: Putative WLIM1, Description = LIM domain-containing protein WLIM1, PFAM = PF00412;PF00412)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold8558_5411-39574' '(at1g77800 : 540.0) PHD finger family protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1). & (gnl|cdd|36172 : 260.0) no description available & (gnl|cdd|34742 : 127.0) no description available & (reliability: 1080.0) & (original description: Putative jade1, Description = Protein Jade-1, PFAM = PF13832;PF13832;PF13831;PF13831)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold10752_42424-45889' '(at1g76500 : 130.0) Encodes an AT hook domain containing protein. Identified in a screen of activation tagged lines that suppress the long-hypocotyl phenotype of a weak phyB allele. Affects cell elongation in the hypocotyl and leaves.Acts redundantly with ESC to modulate hypocotyl growth inhibition in response to light; SUPPRESSOR OF PHYB-4#3 (SOB3); FUNCTIONS IN: DNA binding; INVOLVED IN: photomorphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT1G20900.1); Has 2179 Blast hits to 1721 proteins in 190 species: Archae - 0; Bacteria - 553; Metazoa - 266; Fungi - 109; Plants - 845; Viruses - 16; Other Eukaryotes - 390 (source: NCBI BLink). & (gnl|cdd|86345 : 122.0) no description available & (reliability: 260.0) & (original description: Putative AGF1, Description = AT hook motif DNA-binding family protein, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold10860_2148-5112' '(at2g45430 : 223.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 137.0) no description available & (reliability: 412.0) & (original description: Putative AHL22, Description = AT-hook motif nuclear-localized protein 22, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold11524_5069-9096' '(at3g28720 : 770.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58100.1); Has 1610 Blast hits to 344 proteins in 85 species: Archae - 0; Bacteria - 567; Metazoa - 95; Fungi - 71; Plants - 145; Viruses - 0; Other Eukaryotes - 732 (source: NCBI BLink). & (reliability: 1540.0) & (original description: Putative Sb10g022840, Description = Putative uncharacterized protein Sb10g022840, PFAM = )' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold12601_9369-14544' '(at4g39680 : 201.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 10985 Blast hits to 6880 proteins in 693 species: Archae - 26; Bacteria - 1256; Metazoa - 3900; Fungi - 1267; Plants - 2321; Viruses - 541; Other Eukaryotes - 1674 (source: NCBI BLink). & (gnl|cdd|37627 : 106.0) no description available & (reliability: 402.0) & (original description: Putative At4g39680, Description = Apoptotic chromatin condensation inducer in the nucleus, PFAM = PF16294;PF02037)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold13314_34335-39884' '(at4g12080 : 144.0) AT-hook motif nuclear-localized protein 1 (AHL1); FUNCTIONS IN: DNA binding; LOCATED IN: mitochondrion, nucleolus, nucleus, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G22770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 126.0) no description available & (reliability: 288.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF02178;PF02178;PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold13609_18065-25062' '(at1g54390 : 336.0) ING2 encodes a member of the Inhibitor of Growth family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; INHIBITOR OF GROWTH 2 (ING2); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT3G24010.1); Has 1316 Blast hits to 1312 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 731; Fungi - 422; Plants - 94; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|37184 : 116.0) no description available & (gnl|cdd|34639 : 96.7) no description available & (reliability: 672.0) & (original description: Putative ING2, Description = PHD finger protein ING2, PFAM = PF00628;PF12998)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold13703_24101-37179' '(at1g77250 : 299.0) RING/FYVE/PHD-type zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 9 (TAIR:AT3G01460.1); Has 5001 Blast hits to 3477 proteins in 217 species: Archae - 2; Bacteria - 0; Metazoa - 3203; Fungi - 426; Plants - 950; Viruses - 0; Other Eukaryotes - 420 (source: NCBI BLink). & (reliability: 598.0) & (original description: Putative glysoja_042669, Description = Histone-lysine N-methyltransferase MLL2, PFAM = PF00628;PF00628)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold14051_12583-27962' '(at5g11430 : 112.0) SPOC domain / Transcription elongation factor S-II protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Spen paralogue and orthologue SPOC, C-terminal (InterPro:IPR012921), Transcription elongation factor S-IIM (InterPro:IPR017890), Transcription elongation factor S-II, central domain (InterPro:IPR003618); BEST Arabidopsis thaliana protein match is: SPOC domain / Transcription elongation factor S-II protein (TAIR:AT5G25520.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative TCM_038158, Description = SPOC domain / Transcription elongation factor S-II protein, putative isoform 1, PFAM = PF07744)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold16540_23673-30560' '(at2g33620 : 129.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 111.0) no description available & (reliability: 258.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold16817_5180-9924' '(gnl|cdd|38117 : 96.6) no description available & (at4g07950 : 88.6) DNA-directed RNA polymerase, subunit M, archaeal; FUNCTIONS IN: in 6 functions; INVOLVED IN: RNA elongation, regulation of transcription, DNA-dependent, transcription, regulation of transcription; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: male gametophyte; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, TFIIS-type (InterPro:IPR001222), DNA-directed RNA polymerase, M/15kDa subunit (InterPro:IPR001529), DNA-directed RNA polymerase, subunit M, archaeal (InterPro:IPR006288), DNA-directed RNA polymerase M, 15kDa subunit, conserved site (InterPro:IPR019761); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase, subunit M, archaeal (TAIR:AT1G01210.1); Has 1132 Blast hits to 1132 proteins in 328 species: Archae - 242; Bacteria - 0; Metazoa - 282; Fungi - 291; Plants - 114; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative Os02g0672700, Description = DNA-directed RNA polymerase subunit, PFAM = PF01096)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold19101_1416-19870' '(at5g18230 : 402.0) transcription regulator NOT2/NOT3/NOT5 family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: negative regulation of transcription, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282), CCR4-NOT complex, subunit 3/ 5 (InterPro:IPR012270), Not CCR4-Not complex component, N-terminal (InterPro:IPR007207); BEST Arabidopsis thaliana protein match is: NOT2 / NOT3 / NOT5 family (TAIR:AT1G07705.2); Has 3972 Blast hits to 2940 proteins in 410 species: Archae - 18; Bacteria - 365; Metazoa - 1231; Fungi - 912; Plants - 255; Viruses - 11; Other Eukaryotes - 1180 (source: NCBI BLink). & (gnl|cdd|37361 : 203.0) no description available & (gnl|cdd|35224 : 127.0) no description available & (reliability: 804.0) & (original description: Putative CNOT3, Description = CCR4-NOT transcription complex subunit 3, PFAM = PF04153)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold20114_2907-31463' '(at5g10940 : 919.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G45620.1). & (gnl|cdd|36524 : 695.0) no description available & (reliability: 1838.0) & (original description: Putative At5g10940, Description = Putative uncharacterized protein At5g10940, PFAM = PF00400;PF00400)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold20202_1-1870' '(at3g17450 : 178.0) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|68508 : 143.0) no description available & (reliability: 356.0) & (original description: Putative BnaA05g17040D, Description = BnaA05g17040D protein, PFAM = PF04937)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold22555_14991-22987' '(gnl|cdd|37778 : 189.0) no description available & (at1g76010 : 173.0) Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein (InterPro:IPR002775); BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein (TAIR:AT1G20220.1); Has 82924 Blast hits to 30623 proteins in 1819 species: Archae - 80; Bacteria - 18988; Metazoa - 40987; Fungi - 4955; Plants - 6789; Viruses - 861; Other Eukaryotes - 10264 (source: NCBI BLink). & (gnl|cdd|85767 : 89.5) no description available & (reliability: 346.0) & (original description: Putative ALBA1, Description = DNA/RNA-binding protein Alba-like protein, PFAM = PF01918)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold24285_10424-15786' '(at1g10170 : 1199.0) Encodes AtNFXL1, a homologue of the putative human transcription repressor NF-X1. Functions as a negative regulator of the trichothecene phytotoxin-induced defense response.; NF-X-like 1 (NFXL1); FUNCTIONS IN: zinc ion binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NF-X1-type (InterPro:IPR000967), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors (TAIR:AT5G05660.1); Has 6781 Blast hits to 3735 proteins in 261 species: Archae - 0; Bacteria - 123; Metazoa - 4814; Fungi - 547; Plants - 327; Viruses - 10; Other Eukaryotes - 960 (source: NCBI BLink). & (gnl|cdd|37163 : 713.0) no description available & (reliability: 2398.0) & (original description: Putative NFXL1, Description = NF-X1-type zinc finger protein NFXL1, PFAM = PF01422;PF01422;PF01422;PF01422;PF01422;PF01422;PF01422;PF01422)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold24709_1-8817' '(at1g50620 : 254.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT3G20280.1); Has 3714 Blast hits to 3101 proteins in 414 species: Archae - 4; Bacteria - 443; Metazoa - 1736; Fungi - 538; Plants - 319; Viruses - 13; Other Eukaryotes - 661 (source: NCBI BLink). & (reliability: 508.0) & (original description: Putative At3g20280, Description = Putative ovule protein, PFAM = PF00628)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold27404_1120-6485' '(at4g39680 : 213.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 10985 Blast hits to 6880 proteins in 693 species: Archae - 26; Bacteria - 1256; Metazoa - 3900; Fungi - 1267; Plants - 2321; Viruses - 541; Other Eukaryotes - 1674 (source: NCBI BLink). & (gnl|cdd|37627 : 114.0) no description available & (reliability: 426.0) & (original description: Putative At4g39680, Description = Apoptotic chromatin condensation inducer in the nucleus, PFAM = PF16294;PF02037)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold27845_7525-24574' '(at3g24870 : 914.0) Helicase/SANT-associated, DNA binding protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), HSA (InterPro:IPR006562), Homeodomain-like (InterPro:IPR009057), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Helicase/SANT-associated, DNA binding protein (TAIR:AT3G24880.1). & (reliability: 1828.0) & (original description: Putative BnaA07g05180D, Description = Putative chromatin modification-related protein EAF1-like, PFAM = PF07529;PF13921)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold29332_1-25111' '(at5g18230 : 445.0) transcription regulator NOT2/NOT3/NOT5 family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: negative regulation of transcription, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282), CCR4-NOT complex, subunit 3/ 5 (InterPro:IPR012270), Not CCR4-Not complex component, N-terminal (InterPro:IPR007207); BEST Arabidopsis thaliana protein match is: NOT2 / NOT3 / NOT5 family (TAIR:AT1G07705.2); Has 3972 Blast hits to 2940 proteins in 410 species: Archae - 18; Bacteria - 365; Metazoa - 1231; Fungi - 912; Plants - 255; Viruses - 11; Other Eukaryotes - 1180 (source: NCBI BLink). & (gnl|cdd|37361 : 291.0) no description available & (gnl|cdd|86527 : 256.0) no description available & (reliability: 890.0) & (original description: Putative not3, Description = CCR4-NOT transcription complex subunit 3, PFAM = PF04065)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold29593_9945-24376' '(at5g60410 : 263.0) Encodes a plant small ubiquitin-like modifier (SUMO) E3 ligase that is a focal controller of Pi starvation-dependent responses. Also required for SA and PAD4-mediated R gene signalling, which in turn confers innate immunity in Arabidopsis. Also involved in the regulation of plant growth, drought responses and freezing tolerance. This latter effect is most likely due to SIZ1 dependent ABI5 sumoylation. Regulates leaf cell division and expansion through salicylic acid accumulation. signaling; SIZ1; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), Zinc finger, MIZ-type (InterPro:IPR004181), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative IVD, Description = E3 SUMO-protein ligase SIZ1, PFAM = PF02037;PF00628)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold29845_281-4226' '(at2g41870 : 127.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G57540.1); Has 469 Blast hits to 467 proteins in 36 species: Archae - 0; Bacteria - 7; Metazoa - 9; Fungi - 6; Plants - 437; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|67381 : 106.0) no description available & (reliability: 254.0) & (original description: Putative At2g41870, Description = Putative DNA binding protein, PFAM = PF03763)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold30224_1004-4448' '(at2g45430 : 129.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 124.0) no description available & (reliability: 258.0) & (original description: Putative AHL27, Description = AT-hook motif nuclear-localized protein 27, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold32404_3935-23305' '(at5g63700 : 330.0) zinc ion binding;DNA binding; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: histone modification, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Plus-3 domain, subgroup (InterPro:IPR018144), SWIB/MDM2 domain (InterPro:IPR003121), Zinc finger, PHD-type (InterPro:IPR001965), Plus-3 (InterPro:IPR004343), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: SWIB/MDM2 domain;Plus-3;GYF (TAIR:AT5G08430.1); Has 1143 Blast hits to 955 proteins in 114 species: Archae - 0; Bacteria - 2; Metazoa - 778; Fungi - 27; Plants - 204; Viruses - 3; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|37157 : 88.6) no description available & (gnl|cdd|47987 : 81.0) no description available & (reliability: 660.0) & (original description: Putative LOC100216926, Description = Putative ovule protein, PFAM = PF02201;PF03126)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold35835_7320-15045' '(at1g67370 : 580.0) meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal.; ASYNAPTIC 1 (ASY1); CONTAINS InterPro DOMAIN/s: SWIRM (InterPro:IPR007526), DNA-binding HORMA (InterPro:IPR003511); BEST Arabidopsis thaliana protein match is: DNA-binding HORMA family protein (TAIR:AT4G32200.1); Has 527 Blast hits to 490 proteins in 159 species: Archae - 0; Bacteria - 18; Metazoa - 158; Fungi - 114; Plants - 58; Viruses - 21; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|39851 : 167.0) no description available & (gnl|cdd|85949 : 136.0) no description available & (reliability: 1160.0) & (original description: Putative ASY1, Description = Asynaptic 1, PFAM = PF02301)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold36684_993-13270' '(at5g15020 : 1204.0) Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190).; SIN3-like 2 (SNL2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 1 (TAIR:AT3G01320.1). & (gnl|cdd|39405 : 219.0) no description available & (gnl|cdd|35161 : 177.0) no description available & (reliability: 2408.0) & (original description: Putative SNL2, Description = Paired amphipathic helix protein Sin3-like 2, PFAM = PF08295;PF02671;PF02671;PF02671;PF16879)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold37158_13639-16900' '(at5g54930 : 110.0) AT hook motif-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: DNA binding (TAIR:AT4G21895.1); Has 42 Blast hits to 42 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative Ccrd_011274, Description = AT hook, DNA-binding motif-containing protein, PFAM = )' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold37316_10337-16977' '(at2g33620 : 175.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 151.0) no description available & (reliability: 350.0) & (original description: Putative AHL8, Description = AT-hook motif nuclear-localized protein 8, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold38691_13246-19449' '(at4g12080 : 247.0) AT-hook motif nuclear-localized protein 1 (AHL1); FUNCTIONS IN: DNA binding; LOCATED IN: mitochondrion, nucleolus, nucleus, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G22770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 145.0) no description available & (reliability: 494.0) & (original description: Putative AHL1, Description = AT-hook motif nuclear-localized protein 1, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold41312_7407-18611' '(at5g47430 : 535.0) DWNN domain, a CCHC-type zinc finger; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DWNN domain (InterPro:IPR014891); BEST Arabidopsis thaliana protein match is: DWNN domain, a CCHC-type zinc finger (TAIR:AT4G17410.1). & (gnl|cdd|35535 : 216.0) no description available & (gnl|cdd|34819 : 142.0) no description available & (reliability: 1070.0) & (original description: Putative dl4735w, Description = Putative uncharacterized protein AT4g17400, PFAM = PF08783;PF13696)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold44113_7055-11037' '(at1g66170 : 695.0) encodes a PHD-domain containing protein required for male meiosis. Gene is expressed in developing male meiocytes and protein is localized to the nucleus.; MALE MEIOCYTE DEATH 1 (MMD1); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: microsporogenesis, regulation of transcription, DNA-dependent, male meiosis; LOCATED IN: nucleus; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT2G01810.1); Has 932 Blast hits to 913 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 337; Fungi - 321; Plants - 250; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|37055 : 183.0) no description available & (reliability: 1390.0) & (original description: Putative MMD1, Description = PHD finger protein MALE MEIOCYTE DEATH 1, PFAM = )' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold44718_5224-17293' '(at3g24870 : 733.0) Helicase/SANT-associated, DNA binding protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), HSA (InterPro:IPR006562), Homeodomain-like (InterPro:IPR009057), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Helicase/SANT-associated, DNA binding protein (TAIR:AT3G24880.1). & (reliability: 1466.0) & (original description: Putative wg241, Description = E1A-binding protein p400, PFAM = PF07529;PF13921)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold47346_1-11700' '(at3g45630 : 658.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|37279 : 256.0) no description available & (gnl|cdd|34774 : 219.0) no description available & (reliability: 1306.0) & (original description: Putative cnot4, Description = CCR4-NOT transcription complex subunit 4, PFAM = PF14570;PF00076)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold50003_8459-14067' '(at5g05140 : 288.0) Transcription elongation factor (TFIIS) family protein; FUNCTIONS IN: transcription regulator activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: Transcription elongation factor (TFIIS) family protein (TAIR:AT3G10820.2); Has 741 Blast hits to 730 proteins in 116 species: Archae - 0; Bacteria - 16; Metazoa - 377; Fungi - 33; Plants - 253; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|72135 : 85.3) no description available & (reliability: 576.0) & (original description: Putative MED26B, Description = Probable mediator of RNA polymerase II transcription subunit 26b, PFAM = PF08711)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold53746_11898-18301' '(at4g12080 : 244.0) AT-hook motif nuclear-localized protein 1 (AHL1); FUNCTIONS IN: DNA binding; LOCATED IN: mitochondrion, nucleolus, nucleus, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G22770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 142.0) no description available & (reliability: 488.0) & (original description: Putative AHL1, Description = AT-hook motif nuclear-localized protein 1, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold54479_3759-11558' '(at1g30680 : 276.0) toprim domain-containing protein; FUNCTIONS IN: DNA helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: DNA replication, DNA metabolic process; CONTAINS InterPro DOMAIN/s: Toprim domain, subgroup (InterPro:IPR006154), DNA helicase, DnaB-like, C-terminal (InterPro:IPR007694), Toprim domain (InterPro:IPR006171); BEST Arabidopsis thaliana protein match is: nucleic acid binding;nucleic acid binding (TAIR:AT1G30660.1); Has 1118 Blast hits to 1106 proteins in 217 species: Archae - 0; Bacteria - 270; Metazoa - 48; Fungi - 0; Plants - 77; Viruses - 127; Other Eukaryotes - 596 (source: NCBI BLink). & (reliability: 510.0) & (original description: Putative At1g30660, Description = Primase homolog protein, PFAM = PF13662)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold56115_2-6727' '(at4g12080 : 241.0) AT-hook motif nuclear-localized protein 1 (AHL1); FUNCTIONS IN: DNA binding; LOCATED IN: mitochondrion, nucleolus, nucleus, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G22770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 150.0) no description available & (reliability: 482.0) & (original description: Putative AHL2, Description = AT-hook motif nuclear-localized protein 2, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold57191_330-10776' '(at2g33620 : 151.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 136.0) no description available & (reliability: 302.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold60037_1-5593' '(p93788|remo_soltu : 103.0) Remorin (pp34) - Solanum tuberosum (Potato) & (at3g61260 : 97.1) Remorin family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT2G45820.1); Has 8155 Blast hits to 5353 proteins in 884 species: Archae - 12; Bacteria - 2269; Metazoa - 1454; Fungi - 651; Plants - 718; Viruses - 174; Other Eukaryotes - 2877 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative REM2, Description = Remorin 2, PFAM = PF03763)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold62389_1-8463' '(at4g11560 : 520.0) bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Transcription elongation factor S-II, central domain (InterPro:IPR003618); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT2G25120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37097 : 265.0) no description available & (gnl|cdd|72853 : 225.0) no description available & (reliability: 1040.0) & (original description: Putative Sb04g013016, Description = Putative uncharacterized protein Sb04g013016, PFAM = PF07500;PF01426)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold62389_2317-7495' '(at4g11560 : 344.0) bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Transcription elongation factor S-II, central domain (InterPro:IPR003618); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT2G25120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37097 : 176.0) no description available & (gnl|cdd|72853 : 167.0) no description available & (reliability: 688.0) & (original description: Putative MTR_6g464540, Description = Bromo-adjacent-like (BAH) domain protein, PFAM = PF07500;PF01426)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold63256_696-8801' '(at2g33490 : 327.0) hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G26910.1); Has 1387 Blast hits to 1097 proteins in 177 species: Archae - 4; Bacteria - 37; Metazoa - 593; Fungi - 281; Plants - 163; Viruses - 19; Other Eukaryotes - 290 (source: NCBI BLink). & (reliability: 590.0) & (original description: Putative At2g33490, Description = Uncharacterized protein At2g33490, PFAM = )' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold63437_4727-9271' '(at2g41870 : 149.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G57540.1); Has 469 Blast hits to 467 proteins in 36 species: Archae - 0; Bacteria - 7; Metazoa - 9; Fungi - 6; Plants - 437; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|67381 : 107.0) no description available & (reliability: 298.0) & (original description: Putative PGSC0003DMG400027238, Description = Remorin-like protein, PFAM = PF03763)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold65690_1-3770' '(at4g21705 : 507.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G02150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1014.0) & (original description: Putative At4g21705, Description = Pentatricopeptide repeat-containing protein At4g21705, mitochondrial, PFAM = PF01535;PF13812)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold67273_2803-8692' '(at4g12540 : 164.0) unknown protein; Has 29 Blast hits to 26 proteins in 11 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold67480_3631-9738' '(at1g67370 : 385.0) meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal.; ASYNAPTIC 1 (ASY1); CONTAINS InterPro DOMAIN/s: SWIRM (InterPro:IPR007526), DNA-binding HORMA (InterPro:IPR003511); BEST Arabidopsis thaliana protein match is: DNA-binding HORMA family protein (TAIR:AT4G32200.1); Has 527 Blast hits to 490 proteins in 159 species: Archae - 0; Bacteria - 18; Metazoa - 158; Fungi - 114; Plants - 58; Viruses - 21; Other Eukaryotes - 158 (source: NCBI BLink). & (reliability: 770.0) & (original description: Putative ASY1, Description = Asynaptic 1, PFAM = PF02301)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold69746_7561-9361' '(at5g60410 : 127.0) Encodes a plant small ubiquitin-like modifier (SUMO) E3 ligase that is a focal controller of Pi starvation-dependent responses. Also required for SA and PAD4-mediated R gene signalling, which in turn confers innate immunity in Arabidopsis. Also involved in the regulation of plant growth, drought responses and freezing tolerance. This latter effect is most likely due to SIZ1 dependent ABI5 sumoylation. Regulates leaf cell division and expansion through salicylic acid accumulation. signaling; SIZ1; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), Zinc finger, MIZ-type (InterPro:IPR004181), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative IVD, Description = E3 SUMO-protein ligase SIZ1, PFAM = )' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold71014_1-8911' '(at5g46640 : 179.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G17950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86345 : 146.0) no description available & (reliability: 358.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold73858_49-7415' '(at4g09980 : 556.0) EMBRYO DEFECTIVE 1691 (EMB1691); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), MT-A70 (InterPro:IPR007757); BEST Arabidopsis thaliana protein match is: mRNAadenosine methylase (TAIR:AT4G10760.1); Has 29929 Blast hits to 18009 proteins in 1024 species: Archae - 39; Bacteria - 4517; Metazoa - 16101; Fungi - 2453; Plants - 1900; Viruses - 259; Other Eukaryotes - 4660 (source: NCBI BLink). & (gnl|cdd|37308 : 465.0) no description available & (gnl|cdd|68631 : 184.0) no description available & (q2hvd6|mta70_medtr : 121.0) Putative N6-adenosine-methyltransferase MT-A70-like (EC 2.1.1.62) - Medicago truncatula (Barrel medic) & (reliability: 1112.0) & (original description: Putative Mettl14, Description = N6-adenosine-methyltransferase subunit METTL14, PFAM = PF05063)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold74083_4372-8383' '(at1g68730 : 101.0) Zim17-type zinc finger protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, Zim17-type (InterPro:IPR007853); BEST Arabidopsis thaliana protein match is: Zim17-type zinc finger protein (TAIR:AT5G27280.1); Has 375 Blast hits to 375 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 108; Fungi - 113; Plants - 110; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative zr1, Description = Zinc ribbon 1, PFAM = PF05180)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold86399_7049-9498' '(at4g11560 : 105.0) bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Transcription elongation factor S-II, central domain (InterPro:IPR003618); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT2G25120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative At4g11560, Description = Bromo-adjacent-like (BAH) domain protein, PFAM = PF07500)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold88493_1-4516' '(at5g15020 : 159.0) Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190).; SIN3-like 2 (SNL2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 1 (TAIR:AT3G01320.1). & (gnl|cdd|39405 : 125.0) no description available & (gnl|cdd|35161 : 90.1) no description available & (reliability: 318.0) & (original description: Putative SIN3, Description = Paired amphipathic helix repeat-containing protein, PFAM = PF02671)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.3scaffold124461_1-1921' '(at3g22220 : 262.0) hAT transposon superfamily; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68508 : 150.0) no description available & (reliability: 524.0) & (original description: Putative BnaA05g17040D, Description = Putative ovule protein, PFAM = PF04937)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold389_681697-691191' '(at1g19340 : 340.0) Methyltransferase MT-A70 family protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), MT-A70 (InterPro:IPR007757); Has 622 Blast hits to 622 proteins in 244 species: Archae - 4; Bacteria - 240; Metazoa - 93; Fungi - 88; Plants - 72; Viruses - 2; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|37567 : 118.0) no description available & (reliability: 680.0) & (original description: Putative At1g19340, Description = Methyltransferase-like protein 2, PFAM = PF05063)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold512_144073-149443' '(at4g39680 : 199.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 10985 Blast hits to 6880 proteins in 693 species: Archae - 26; Bacteria - 1256; Metazoa - 3900; Fungi - 1267; Plants - 2321; Viruses - 541; Other Eukaryotes - 1674 (source: NCBI BLink). & (gnl|cdd|37627 : 112.0) no description available & (reliability: 398.0) & (original description: Putative At4g39680, Description = Predicted protein, PFAM = PF16294;PF02037)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold543_254124-545987' '(at2g41870 : 149.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G57540.1); Has 469 Blast hits to 467 proteins in 36 species: Archae - 0; Bacteria - 7; Metazoa - 9; Fungi - 6; Plants - 437; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|67381 : 108.0) no description available & (reliability: 298.0) & (original description: Putative At2g41870, Description = Putative DNA binding protein, PFAM = PF03763)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold570_374112-388285' '(at4g09980 : 656.0) EMBRYO DEFECTIVE 1691 (EMB1691); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), MT-A70 (InterPro:IPR007757); BEST Arabidopsis thaliana protein match is: mRNAadenosine methylase (TAIR:AT4G10760.1); Has 29929 Blast hits to 18009 proteins in 1024 species: Archae - 39; Bacteria - 4517; Metazoa - 16101; Fungi - 2453; Plants - 1900; Viruses - 259; Other Eukaryotes - 4660 (source: NCBI BLink). & (gnl|cdd|37308 : 376.0) no description available & (gnl|cdd|68631 : 142.0) no description available & (q2hvd6|mta70_medtr : 92.0) Putative N6-adenosine-methyltransferase MT-A70-like (EC 2.1.1.62) - Medicago truncatula (Barrel medic) & (reliability: 1312.0) & (original description: Putative EMB1691, Description = Methyltransferase-like protein 1, PFAM = PF05063)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold599_667012-669986' '(at2g45430 : 199.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 145.0) no description available & (reliability: 366.0) & (original description: Putative AHL16, Description = AT-hook motif nuclear-localized protein 16, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold766_252308-269357' '(at3g24870 : 947.0) Helicase/SANT-associated, DNA binding protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), HSA (InterPro:IPR006562), Homeodomain-like (InterPro:IPR009057), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Helicase/SANT-associated, DNA binding protein (TAIR:AT3G24880.1). & (reliability: 1894.0) & (original description: Putative BnaA07g05180D, Description = Putative chromatin modification-related protein EAF1-like, PFAM = PF07529;PF13921)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold958_13053-18791' '(at1g56110 : 729.0) NOP56-like protein; homolog of nucleolar protein NOP56 (NOP56); LOCATED IN: nucleolus, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOP5, N-terminal (InterPro:IPR012974), NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: NOP56-like pre RNA processing ribonucleoprotein (TAIR:AT3G12860.1); Has 24182 Blast hits to 12540 proteins in 912 species: Archae - 265; Bacteria - 1523; Metazoa - 8592; Fungi - 2628; Plants - 1300; Viruses - 179; Other Eukaryotes - 9695 (source: NCBI BLink). & (gnl|cdd|37784 : 663.0) no description available & (gnl|cdd|31687 : 327.0) no description available & (reliability: 1458.0) & (original description: Putative nop56, Description = Nucleolar protein 56, PFAM = PF08156;PF01798)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold1025_323134-332580' '(at5g46640 : 175.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G17950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86345 : 144.0) no description available & (reliability: 350.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold1293_48480-53658' '(at1g15910 : 494.0) XH/XS domain-containing protein; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379), Domain of unknown function, putative Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT4G00380.1); Has 48628 Blast hits to 29972 proteins in 1836 species: Archae - 567; Bacteria - 5701; Metazoa - 24120; Fungi - 3416; Plants - 1878; Viruses - 163; Other Eukaryotes - 12783 (source: NCBI BLink). & (gnl|cdd|67106 : 166.0) no description available & (reliability: 988.0) & (original description: Putative FDM1, Description = Factor of DNA methylation 1, PFAM = PF03468;PF03469;PF03470)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold1298_293076-299688' '(at3g48670 : 482.0) Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway.; INVOLVED IN DE NOVO 2 (IDN2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion, chromatin silencing, DNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379), Domain of unknown function, putative Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT3G12550.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67105 : 160.0) no description available & (reliability: 964.0) & (original description: Putative IDN2, Description = Protein INVOLVED IN DE NOVO 2, PFAM = PF03468;PF03469)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold1315_24762-27708' '(at2g45430 : 218.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 141.0) no description available & (reliability: 408.0) & (original description: Putative AHL22, Description = AT-hook motif nuclear-localized protein 22, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold1341_19045-28121' '(at3g48670 : 421.0) Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway.; INVOLVED IN DE NOVO 2 (IDN2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion, chromatin silencing, DNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379), Domain of unknown function, putative Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT3G12550.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67105 : 165.0) no description available & (reliability: 842.0) & (original description: Putative FDM3, Description = Putative domain XH, PFAM = PF03469;PF03468;PF03470;PF03470;PF03470;PF03470;PF03470;PF03470;PF03470;PF03470)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold1603_113488-117442' '(at2g41870 : 146.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G57540.1); Has 469 Blast hits to 467 proteins in 36 species: Archae - 0; Bacteria - 7; Metazoa - 9; Fungi - 6; Plants - 437; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|67381 : 103.0) no description available & (reliability: 292.0) & (original description: Putative LOC100273279, Description = Remorin-like protein, PFAM = PF03763)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold1666_60814-66176' '(at1g10170 : 1202.0) Encodes AtNFXL1, a homologue of the putative human transcription repressor NF-X1. Functions as a negative regulator of the trichothecene phytotoxin-induced defense response.; NF-X-like 1 (NFXL1); FUNCTIONS IN: zinc ion binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NF-X1-type (InterPro:IPR000967), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors (TAIR:AT5G05660.1); Has 6781 Blast hits to 3735 proteins in 261 species: Archae - 0; Bacteria - 123; Metazoa - 4814; Fungi - 547; Plants - 327; Viruses - 10; Other Eukaryotes - 960 (source: NCBI BLink). & (gnl|cdd|37163 : 710.0) no description available & (reliability: 2404.0) & (original description: Putative NFXL1, Description = NF-X1-type zinc finger protein NFXL1, PFAM = PF01422;PF01422;PF01422;PF01422;PF01422;PF01422;PF01422;PF01422)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold1699_130617-139963' '(at1g51540 : 511.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G27220.1); Has 1998 Blast hits to 1729 proteins in 252 species: Archae - 27; Bacteria - 371; Metazoa - 1276; Fungi - 25; Plants - 123; Viruses - 45; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|39642 : 84.7) no description available & (reliability: 1022.0) & (original description: Putative At1g51540, Description = Kelch-like protein 20, PFAM = PF13964;PF01344)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold1730_404734-408682' '(at4g15020 : 327.0) hAT transposon superfamily; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT3G22220.2); Has 879 Blast hits to 805 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 863; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|68508 : 141.0) no description available & (reliability: 622.0) & (original description: Putative BnaA05g17040D, Description = BnaA05g17040D protein, PFAM = PF04937;PF02892;PF05699)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold2394_234981-242347' '(at4g09980 : 556.0) EMBRYO DEFECTIVE 1691 (EMB1691); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), MT-A70 (InterPro:IPR007757); BEST Arabidopsis thaliana protein match is: mRNAadenosine methylase (TAIR:AT4G10760.1); Has 29929 Blast hits to 18009 proteins in 1024 species: Archae - 39; Bacteria - 4517; Metazoa - 16101; Fungi - 2453; Plants - 1900; Viruses - 259; Other Eukaryotes - 4660 (source: NCBI BLink). & (gnl|cdd|37308 : 465.0) no description available & (gnl|cdd|68631 : 184.0) no description available & (q2hvd6|mta70_medtr : 121.0) Putative N6-adenosine-methyltransferase MT-A70-like (EC 2.1.1.62) - Medicago truncatula (Barrel medic) & (reliability: 1112.0) & (original description: Putative EMB1691, Description = Methyltransferase-like protein 1, PFAM = PF05063)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold2409_316936-320484' '(at5g60800 : 128.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G36950.1). & (reliability: 232.0) & (original description: Putative A15, Description = Heavy metal transport/detoxification superfamily protein, putative, PFAM = PF00403;PF00403)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold2551_171298-177957' '(at2g33620 : 180.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 148.0) no description available & (reliability: 360.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold2681_184988-219173' '(at3g24870 : 972.0) Helicase/SANT-associated, DNA binding protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), HSA (InterPro:IPR006562), Homeodomain-like (InterPro:IPR009057), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Helicase/SANT-associated, DNA binding protein (TAIR:AT3G24880.1). & (reliability: 1944.0) & (original description: Putative Os08g0177300, Description = Putative ovule protein, PFAM = PF07529;PF13921)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold2888_74348-85880' '(at1g34360 : 143.0) translation initiation factor 3 (IF-3) family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Translation initiation factor 3, N-terminal (InterPro:IPR019814), Translation initiation factor 3, C-terminal (InterPro:IPR019815), Translation initiation factor 3 (InterPro:IPR001288); BEST Arabidopsis thaliana protein match is: Translation initiation factor 3 protein (TAIR:AT2G24060.1); Has 45300 Blast hits to 30219 proteins in 3054 species: Archae - 48; Bacteria - 10638; Metazoa - 13046; Fungi - 7368; Plants - 4879; Viruses - 1090; Other Eukaryotes - 8231 (source: NCBI BLink). & (gnl|cdd|80458 : 139.0) no description available & (reliability: 286.0) & (original description: Putative PGSC0003DMG400006166, Description = Translation initiation factor IF-3, PFAM = PF00707;PF05198)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold3092_208452-213426' '(at1g77860 : 285.0) mutant has Altered morphology of pollen exine wall; Seven-Path Transmembrane Protein; KOMPEITO (KOM); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like 1 (TAIR:AT2G29050.1); Has 4976 Blast hits to 4975 proteins in 1564 species: Archae - 94; Bacteria - 3058; Metazoa - 485; Fungi - 120; Plants - 306; Viruses - 0; Other Eukaryotes - 913 (source: NCBI BLink). & (gnl|cdd|37500 : 212.0) no description available & (gnl|cdd|85618 : 111.0) no description available & (reliability: 570.0) & (original description: Putative KOM, Description = RHOMBOID-like protein 8, PFAM = PF01694)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold3098_3193-16799' '(at4g02560 : 455.0) Encodes a nuclear localized protein with similarity to transcriptional regulators. Recessive mutants are late flowering. Expression of LFY is reduced in LD mutants.; luminidependens (LD); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287). & (reliability: 910.0) & (original description: Putative LD, Description = Luminidependens, PFAM = )' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold3101_223203-227055' '(at1g66170 : 348.0) encodes a PHD-domain containing protein required for male meiosis. Gene is expressed in developing male meiocytes and protein is localized to the nucleus.; MALE MEIOCYTE DEATH 1 (MMD1); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: microsporogenesis, regulation of transcription, DNA-dependent, male meiosis; LOCATED IN: nucleus; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT2G01810.1); Has 932 Blast hits to 913 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 337; Fungi - 321; Plants - 250; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|37055 : 129.0) no description available & (reliability: 696.0) & (original description: Putative DUET, Description = PHD finger protein MALE MEIOCYTE DEATH 1, PFAM = )' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold4287_59349-64005' '(gnl|cdd|68508 : 98.0) no description available & (at3g17450 : 88.6) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative PGSC0003DMG400017078, Description = Putative ovule protein, PFAM = PF04937;PF04937)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold5410_115401-128250' '(at1g72650 : 283.0) Arabidopsis thaliana myb family transcription factor (At1g72650); TRF-like 6 (TRFL6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to cadmium ion, response to salt stress; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 3 (TAIR:AT1G17460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 566.0) & (original description: Putative MYB30, Description = Telomere repeat-binding factor like-protein, PFAM = PF00249)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold5595_128305-130658' '(at3g58470 : 105.0) nucleic acid binding;methyltransferases; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, eukaryotic (InterPro:IPR019369), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052); Has 287 Blast hits to 287 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 79; Plants - 48; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|38560 : 92.0) no description available & (reliability: 210.0) & (original description: Putative ATRBL15, Description = Protein-lysine N-methyltransferase B456_006G146100, PFAM = PF10237)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold6271_102552-106963' '(at5g07030 : 486.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G54400.1); Has 3400 Blast hits to 3386 proteins in 327 species: Archae - 0; Bacteria - 0; Metazoa - 917; Fungi - 461; Plants - 1890; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|36553 : 193.0) no description available & (reliability: 972.0) & (original description: Putative BnaA09g34280D, Description = BnaA09g34280D protein, PFAM = PF14543;PF14541)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold6770_3765-14314' '(at1g67370 : 582.0) meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal.; ASYNAPTIC 1 (ASY1); CONTAINS InterPro DOMAIN/s: SWIRM (InterPro:IPR007526), DNA-binding HORMA (InterPro:IPR003511); BEST Arabidopsis thaliana protein match is: DNA-binding HORMA family protein (TAIR:AT4G32200.1); Has 527 Blast hits to 490 proteins in 159 species: Archae - 0; Bacteria - 18; Metazoa - 158; Fungi - 114; Plants - 58; Viruses - 21; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|39851 : 179.0) no description available & (gnl|cdd|85949 : 143.0) no description available & (reliability: 1164.0) & (original description: Putative ASY1, Description = Asynaptic 1, PFAM = PF02301)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold6770_5398-14426' '(at1g67370 : 441.0) meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal.; ASYNAPTIC 1 (ASY1); CONTAINS InterPro DOMAIN/s: SWIRM (InterPro:IPR007526), DNA-binding HORMA (InterPro:IPR003511); BEST Arabidopsis thaliana protein match is: DNA-binding HORMA family protein (TAIR:AT4G32200.1); Has 527 Blast hits to 490 proteins in 159 species: Archae - 0; Bacteria - 18; Metazoa - 158; Fungi - 114; Plants - 58; Viruses - 21; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|39851 : 180.0) no description available & (gnl|cdd|85949 : 139.0) no description available & (reliability: 882.0) & (original description: Putative ASY1, Description = Asynaptic 1, PFAM = PF02301)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold6962_39480-45570' '(at4g11400 : 236.0) ARID/BRIGHT DNA-binding domain;ELM2 domain protein; FUNCTIONS IN: DNA binding; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), ELM2 (InterPro:IPR000949), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain;ELM2 domain protein (TAIR:AT2G46040.1); Has 254 Blast hits to 233 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 84; Fungi - 4; Plants - 166; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative ARID2, Description = AT-rich interactive domain-containing protein 1, PFAM = PF01388)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold8326_1400-5184' '(at4g15020 : 285.0) hAT transposon superfamily; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT3G22220.2); Has 879 Blast hits to 805 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 863; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|68508 : 142.0) no description available & (reliability: 568.0) & (original description: Putative BnaA07g02460D, Description = BnaA07g02460D protein, PFAM = PF04937;PF02892)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold9215_1117-5869' '(at1g02370 : 265.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G01990.1); Has 6320 Blast hits to 3912 proteins in 155 species: Archae - 0; Bacteria - 6; Metazoa - 44; Fungi - 46; Plants - 6080; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (q76c99|rf1_orysa : 85.9) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 530.0) & (original description: Putative , Description = , PFAM = PF01535;PF01535;PF01535;PF13812)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold9401_16415-19368' '(at4g14465 : 158.0) AT-hook motif nuclear-localized protein 20 (AHL20); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 19 (TAIR:AT3G04570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 137.0) no description available & (reliability: 288.0) & (original description: Putative AHL15, Description = AT-hook motif nuclear-localized protein 15, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold18861_1-1543' '(at1g43260 : 140.0) hAT transposon superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily protein (TAIR:AT5G31412.1); Has 599 Blast hits to 592 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 2; Plants - 577; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|68508 : 140.0) no description available & (reliability: 254.0) & (original description: Putative PGSC0003DMG400030248, Description = BnaA05g17040D protein, PFAM = PF04937)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold23577_1-1293' '(gnl|cdd|68508 : 117.0) no description available & (at3g17450 : 96.7) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative BnaC02g38090D, Description = BnaC02g38090D protein, PFAM = PF04937)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'nbv0.5scaffold44688_1-789' '(at3g17450 : 163.0) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|68508 : 145.0) no description available & (reliability: 326.0) & (original description: Putative BnaA05g17040D, Description = BnaA05g17040D protein, PFAM = PF04937)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00000719ctg000_8788-15084' '(at3g45830 : 902.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02290.1); Has 499 Blast hits to 438 proteins in 100 species: Archae - 0; Bacteria - 7; Metazoa - 236; Fungi - 15; Plants - 108; Viruses - 2; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|37138 : 631.0) no description available & (reliability: 1804.0) & (original description: Putative v1g2855, Description = Predicted protein, PFAM = )' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00001414ctg005_5135-11808' '(at2g45820 : 103.0) Remorin family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G61260.1); Has 2543 Blast hits to 1840 proteins in 340 species: Archae - 2; Bacteria - 408; Metazoa - 392; Fungi - 191; Plants - 500; Viruses - 4; Other Eukaryotes - 1046 (source: NCBI BLink). & (p93788|remo_soltu : 99.4) Remorin (pp34) - Solanum tuberosum (Potato) & (reliability: 206.0) & (original description: Putative BnaAnng30100D, Description = BnaAnng30100D protein, PFAM = PF03763)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00001833ctg007_1016-7694' '(at4g28830 : 270.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Putative RNA methylase (InterPro:IPR000241), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052); Has 3586 Blast hits to 3586 proteins in 1312 species: Archae - 213; Bacteria - 2970; Metazoa - 118; Fungi - 5; Plants - 52; Viruses - 0; Other Eukaryotes - 228 (source: NCBI BLink). & (gnl|cdd|38630 : 194.0) no description available & (gnl|cdd|32444 : 158.0) no description available & (reliability: 540.0) & (original description: Putative Mettl5, Description = Methyltransferase-like protein 5, PFAM = PF06325)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00002763ctg000_1755-5002' '(at2g45430 : 193.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 146.0) no description available & (reliability: 368.0) & (original description: Putative AHL22, Description = AT-hook motif nuclear-localized protein 22, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00003968ctg000_20572-24425' '(at2g45430 : 129.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 121.0) no description available & (reliability: 258.0) & (original description: Putative AHL27, Description = AT-hook motif nuclear-localized protein 27, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00004219ctg004_1-2510' '(at3g51120 : 112.0) DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: histone modification, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Plus-3 domain, subgroup (InterPro:IPR018144), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), GYF (InterPro:IPR003169), SWIB/MDM2 domain (InterPro:IPR003121), Plus-3 (InterPro:IPR004343), SWIB domain (InterPro:IPR019835), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: nucleic acid binding;zinc ion binding;DNA binding (TAIR:AT2G16485.1); Has 2327 Blast hits to 1758 proteins in 258 species: Archae - 0; Bacteria - 308; Metazoa - 909; Fungi - 193; Plants - 493; Viruses - 18; Other Eukaryotes - 406 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative NERD, Description = Zinc finger CCCH domain-containing protein 44, PFAM = PF13771)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00004221ctg002_4058-8109' '(at3g49410 : 425.0) Transcription factor IIIC, subunit 5; CONTAINS InterPro DOMAIN/s: Transcription factor IIIC, subunit 5 (InterPro:IPR019136); BEST Arabidopsis thaliana protein match is: Transcription factor IIIC, subunit 5 (TAIR:AT5G24450.1); Has 2810 Blast hits to 2245 proteins in 293 species: Archae - 21; Bacteria - 231; Metazoa - 753; Fungi - 513; Plants - 191; Viruses - 81; Other Eukaryotes - 1020 (source: NCBI BLink). & (gnl|cdd|37684 : 241.0) no description available & (reliability: 850.0) & (original description: Putative BnaAnng17860D, Description = BnaAnng17860D protein, PFAM = PF09734)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00004570ctg005_371-4140' '(at2g41870 : 131.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G57540.1); Has 469 Blast hits to 467 proteins in 36 species: Archae - 0; Bacteria - 7; Metazoa - 9; Fungi - 6; Plants - 437; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|67381 : 106.0) no description available & (reliability: 262.0) & (original description: Putative At2g41870, Description = Putative DNA binding protein, PFAM = PF03763)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00004921ctg004_183-5527' '(at1g51540 : 505.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G27220.1); Has 1998 Blast hits to 1729 proteins in 252 species: Archae - 27; Bacteria - 371; Metazoa - 1276; Fungi - 25; Plants - 123; Viruses - 45; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|39642 : 96.6) no description available & (reliability: 1010.0) & (original description: Putative At3g27220, Description = Kelch repeat-containing protein At3g27220, PFAM = PF13964;PF01344;PF13418)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00005251ctg016_8461-12440' '(at1g60770 : 605.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G02370.1); Has 19797 Blast hits to 7926 proteins in 238 species: Archae - 2; Bacteria - 46; Metazoa - 98; Fungi - 130; Plants - 18960; Viruses - 0; Other Eukaryotes - 561 (source: NCBI BLink). & (reliability: 1210.0) & (original description: Putative At1g60770, Description = Pentatricopeptide repeat-containing protein At1g60770, PFAM = PF13041;PF01535;PF01535;PF01535;PF01535)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00005373ctg021_497-5178' '(at4g12080 : 88.6) AT-hook motif nuclear-localized protein 1 (AHL1); FUNCTIONS IN: DNA binding; LOCATED IN: mitochondrion, nucleolus, nucleus, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G22770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative AHP1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00005813ctg007_12307-15402' '(at5g05660 : 125.0) Encodes a homolog of the mammalian zinc finger transcription factor NF-X1.; ATNFXL2; FUNCTIONS IN: zinc ion binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NF-X1-type (InterPro:IPR000967), Zinc finger, PHD-type, conserved site (InterPro:IPR019786); BEST Arabidopsis thaliana protein match is: NF-X-like 1 (TAIR:AT1G10170.1); Has 10412 Blast hits to 5299 proteins in 265 species: Archae - 4; Bacteria - 94; Metazoa - 8397; Fungi - 425; Plants - 250; Viruses - 11; Other Eukaryotes - 1231 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative EBI, Description = NF-X1-type zinc finger protein NFXL2, PFAM = )' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00005969ctg010_13456-18481' '(at1g56110 : 387.0) NOP56-like protein; homolog of nucleolar protein NOP56 (NOP56); LOCATED IN: nucleolus, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOP5, N-terminal (InterPro:IPR012974), NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: NOP56-like pre RNA processing ribonucleoprotein (TAIR:AT3G12860.1); Has 24182 Blast hits to 12540 proteins in 912 species: Archae - 265; Bacteria - 1523; Metazoa - 8592; Fungi - 2628; Plants - 1300; Viruses - 179; Other Eukaryotes - 9695 (source: NCBI BLink). & (gnl|cdd|37784 : 320.0) no description available & (gnl|cdd|31687 : 112.0) no description available & (reliability: 774.0) & (original description: Putative sik1, Description = Nucleolar protein 56, PFAM = PF08156;PF01798)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00006246ctg009_1018-4631' '(at5g54930 : 89.4) AT hook motif-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: DNA binding (TAIR:AT4G21895.1); Has 42 Blast hits to 42 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative Ccrd_011274, Description = AT hook, DNA-binding motif-containing protein, PFAM = )' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00007310ctg007_436-5017' '(at2g20710 : 292.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G28020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 584.0) & (original description: Putative At2g20710, Description = Pentatricopeptide repeat-containing protein At2g20710, mitochondrial, PFAM = PF13041;PF01535;PF01535;PF01535;PF01535;PF01535)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00008448ctg007_1-6246' '(at3g04590 : 124.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: DNA-binding family protein (TAIR:AT5G28590.1); Has 3387 Blast hits to 3069 proteins in 223 species: Archae - 0; Bacteria - 59; Metazoa - 1696; Fungi - 298; Plants - 799; Viruses - 15; Other Eukaryotes - 520 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative AHP1, Description = AT hook motif DNA-binding family protein, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00010366ctg001_278-5274' '(at4g39680 : 271.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 10985 Blast hits to 6880 proteins in 693 species: Archae - 26; Bacteria - 1256; Metazoa - 3900; Fungi - 1267; Plants - 2321; Viruses - 541; Other Eukaryotes - 1674 (source: NCBI BLink). & (gnl|cdd|37627 : 133.0) no description available & (reliability: 542.0) & (original description: Putative At4g39680, Description = Putative uncharacterized protein AT4g39680, PFAM = PF02037;PF16294)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00010724ctg022_26597-31176' '(at1g02150 : 626.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G02820.1); Has 10811 Blast hits to 5678 proteins in 200 species: Archae - 0; Bacteria - 11; Metazoa - 28; Fungi - 100; Plants - 10424; Viruses - 0; Other Eukaryotes - 248 (source: NCBI BLink). & (reliability: 1252.0) & (original description: Putative At1g02150, Description = Pentatricopeptide repeat-containing protein At1g02150, PFAM = PF01535;PF01535;PF01535;PF13812)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00010953ctg006_4602-7683' '(at3g49410 : 134.0) Transcription factor IIIC, subunit 5; CONTAINS InterPro DOMAIN/s: Transcription factor IIIC, subunit 5 (InterPro:IPR019136); BEST Arabidopsis thaliana protein match is: Transcription factor IIIC, subunit 5 (TAIR:AT5G24450.1); Has 2810 Blast hits to 2245 proteins in 293 species: Archae - 21; Bacteria - 231; Metazoa - 753; Fungi - 513; Plants - 191; Viruses - 81; Other Eukaryotes - 1020 (source: NCBI BLink). & (gnl|cdd|37684 : 92.8) no description available & (reliability: 268.0) & (original description: Putative LOC100192729, Description = , PFAM = PF09734)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00011419ctg013_3747-9900' '(at5g11430 : 405.0) SPOC domain / Transcription elongation factor S-II protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Spen paralogue and orthologue SPOC, C-terminal (InterPro:IPR012921), Transcription elongation factor S-IIM (InterPro:IPR017890), Transcription elongation factor S-II, central domain (InterPro:IPR003618); BEST Arabidopsis thaliana protein match is: SPOC domain / Transcription elongation factor S-II protein (TAIR:AT5G25520.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36847 : 244.0) no description available & (gnl|cdd|87289 : 118.0) no description available & (reliability: 810.0) & (original description: Putative phf3, Description = BnaCnng08410D protein, PFAM = PF07744;PF07500)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00011798ctg006_649-7564' '(at2g18090 : 229.0) PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), SWIB/MDM2 domain (InterPro:IPR003121), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), GYF (InterPro:IPR003169), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding (TAIR:AT3G51120.1); Has 1270 Blast hits to 1121 proteins in 190 species: Archae - 0; Bacteria - 166; Metazoa - 513; Fungi - 60; Plants - 433; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative NERD, Description = Zinc finger CCCH domain-containing protein 44, PFAM = PF02213;PF13771)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00013894ctg001_9655-12345' '(at5g55390 : 176.0) Encodes EDM2 (enhanced downy mildew 2). The predicted protein bears typical features of transcriptional regulators. EDM2 contains two putative bipartite nuclear localization signals (NLS) two zinc-finger-like motifs, a Proline-rich region and a large aspartic acid-rich region. Both zinc-finger-like stretches resemble the PHD (plant homeodomain) finger motif. Mutations in EDM2 comprise RPP7 mediated resistance against Hyaloperonospora parasitica isolate Hiks1 (HpHiks1). EDM2 may function as a direct or indirect regulator of RPP7 expression.; ENHANCED DOWNY MILDEW 2 (EDM2); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: EDM2-like protein1 (TAIR:AT5G48090.1). & (reliability: 352.0) & (original description: Putative EDM2, Description = DNA (Cytosine-5)-methyltransferase 1, replication foci domain-containing protein, PFAM = PF12047)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00014692ctg019_1432-4149' '(o82797|pcna_tobac : 504.0) Proliferating cell nuclear antigen (PCNA) - Nicotiana tabacum (Common tobacco) & (at2g29570 : 470.0) Functionally interacts with POLH to repair DNA damaged by UVB damage.; proliferating cell nuclear antigen 2 (PCNA2); FUNCTIONS IN: DNA binding, DNA polymerase processivity factor activity; INVOLVED IN: regulation of DNA replication, error-prone translesion synthesis; LOCATED IN: PCNA complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cellular nuclear antigen 1 (TAIR:AT1G07370.1); Has 1860 Blast hits to 1848 proteins in 457 species: Archae - 391; Bacteria - 0; Metazoa - 314; Fungi - 169; Plants - 159; Viruses - 73; Other Eukaryotes - 754 (source: NCBI BLink). & (gnl|cdd|36849 : 402.0) no description available & (gnl|cdd|48351 : 265.0) no description available & (reliability: 940.0) & (original description: Putative pcn, Description = Proliferating cell nuclear antigen, PFAM = PF00705;PF02747)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00014848ctg019_9992-19845' '(at5g22760 : 444.0) PHD finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain (InterPro:IPR004022), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Zinc finger, PHD-type (InterPro:IPR001965), DDT domain superfamily (InterPro:IPR018501), DDT domain, subgroup (InterPro:IPR018500), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: metalloendopeptidases;zinc ion binding;DNA binding (TAIR:AT5G35210.2); Has 3640 Blast hits to 3265 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 2369; Fungi - 398; Plants - 598; Viruses - 0; Other Eukaryotes - 275 (source: NCBI BLink). & (gnl|cdd|36686 : 351.0) no description available & (reliability: 888.0) & (original description: Putative DDP1, Description = Nucleosome-remodeling factor subunit BPTF, PFAM = PF15612;PF00628;PF02791)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00015093ctg001_1-5202' '(at4g39680 : 221.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 10985 Blast hits to 6880 proteins in 693 species: Archae - 26; Bacteria - 1256; Metazoa - 3900; Fungi - 1267; Plants - 2321; Viruses - 541; Other Eukaryotes - 1674 (source: NCBI BLink). & (gnl|cdd|37627 : 106.0) no description available & (reliability: 442.0) & (original description: Putative TCM_001192, Description = SAP domain-containing protein isoform 1, PFAM = PF16294;PF02037)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00015325ctg005_13283-15827' '(at1g43260 : 105.0) hAT transposon superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily protein (TAIR:AT5G31412.1); Has 599 Blast hits to 592 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 2; Plants - 577; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|68508 : 99.0) no description available & (reliability: 204.0) & (original description: Putative PGSC0003DMG400030248, Description = Putative ovule protein, PFAM = PF04937)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00015723ctg005_1-2349' '(at4g30200 : 171.0) Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.; vernalization5/VIN3-like (VEL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vegetative to reproductive phase transition of meristem; LOCATED IN: PcG protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423, plant (InterPro:IPR004082), Fibronectin, type III-like fold (InterPro:IPR008957), Fibronectin, type III (InterPro:IPR003961); BEST Arabidopsis thaliana protein match is: Fibronectin type III domain-containing protein (TAIR:AT5G57380.1). & (reliability: 324.0) & (original description: Putative VEL1, Description = Protein VERNALIZATION 5, PFAM = PF07227)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00019033ctg016_7433-16623' '(at5g55600 : 429.0) agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: RNA binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395), Bromo adjacent homology (BAH) domain (InterPro:IPR001025); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT1G68580.2). & (gnl|cdd|72861 : 147.0) no description available & (reliability: 858.0) & (original description: Putative BnaA03g11300D, Description = BnaA03g11300D protein, PFAM = PF05641;PF01426)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00019404ctg000_1120-7550' '(at5g43500 : 291.0) encodes a protein whose sequence is similar to actin-related proteins (ARPs) in other organisms. Member of nuclear ARP family of genes.; actin-related protein 9 (ARP9); CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36016 : 189.0) no description available & (reliability: 582.0) & (original description: Putative ACT, Description = Actin-related protein 9, PFAM = )' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00019404ctg008_1-8607' '(at5g43500 : 401.0) encodes a protein whose sequence is similar to actin-related proteins (ARPs) in other organisms. Member of nuclear ARP family of genes.; actin-related protein 9 (ARP9); CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36016 : 207.0) no description available & (gnl|cdd|28896 : 88.4) no description available & (reliability: 802.0) & (original description: Putative ARP, Description = ARP protein, PFAM = PF00022)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00020173ctg002_1-756' '(gnl|cdd|68508 : 135.0) no description available & (at3g17450 : 134.0) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative BnaA07g02460D, Description = BnaA07g02460D protein, PFAM = PF04937)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00021130ctg008_8365-13550' '(at4g15020 : 682.0) hAT transposon superfamily; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT3G22220.2); Has 879 Blast hits to 805 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 863; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|68508 : 200.0) no description available & (reliability: 1330.0) & (original description: Putative dl3551w, Description = Putative uncharacterized protein AT4g15020, PFAM = PF05699;PF04937;PF02892)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00023097ctg001_9372-12416' '(at4g09980 : 163.0) EMBRYO DEFECTIVE 1691 (EMB1691); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), MT-A70 (InterPro:IPR007757); BEST Arabidopsis thaliana protein match is: mRNAadenosine methylase (TAIR:AT4G10760.1); Has 29929 Blast hits to 18009 proteins in 1024 species: Archae - 39; Bacteria - 4517; Metazoa - 16101; Fungi - 2453; Plants - 1900; Viruses - 259; Other Eukaryotes - 4660 (source: NCBI BLink). & (gnl|cdd|37308 : 112.0) no description available & (reliability: 326.0) & (original description: Putative EMB1691, Description = Methyltransferase-like protein 1, PFAM = PF05063)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00023242ctg005_9008-11824' '(gnl|cdd|68508 : 147.0) no description available & (at1g43260 : 120.0) hAT transposon superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily protein (TAIR:AT5G31412.1); Has 599 Blast hits to 592 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 2; Plants - 577; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative PGSC0003DMG400030248, Description = BnaA05g17040D protein, PFAM = PF04937)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00023949ctg007_3238-16088' '(at5g15020 : 1065.0) Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190).; SIN3-like 2 (SNL2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 1 (TAIR:AT3G01320.1). & (gnl|cdd|39405 : 221.0) no description available & (gnl|cdd|35161 : 154.0) no description available & (reliability: 2130.0) & (original description: Putative SNL2, Description = Paired amphipathic helix protein Sin3-like 2, PFAM = PF16879;PF02671;PF02671;PF02671)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00025151ctg005_14944-26665' '(at5g22760 : 739.0) PHD finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain (InterPro:IPR004022), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Zinc finger, PHD-type (InterPro:IPR001965), DDT domain superfamily (InterPro:IPR018501), DDT domain, subgroup (InterPro:IPR018500), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: metalloendopeptidases;zinc ion binding;DNA binding (TAIR:AT5G35210.2); Has 3640 Blast hits to 3265 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 2369; Fungi - 398; Plants - 598; Viruses - 0; Other Eukaryotes - 275 (source: NCBI BLink). & (gnl|cdd|36686 : 380.0) no description available & (reliability: 1478.0) & (original description: Putative At5g22760, Description = Putative ovule protein, PFAM = PF15612;PF02791)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00026224ctg024_699-10992' '(at3g24880 : 763.0) Helicase/SANT-associated, DNA binding protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), HSA (InterPro:IPR006562), Homeodomain-like (InterPro:IPR009057), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Helicase/SANT-associated, DNA binding protein (TAIR:AT3G24870.1); Has 17312 Blast hits to 12172 proteins in 594 species: Archae - 4; Bacteria - 677; Metazoa - 8001; Fungi - 2909; Plants - 1838; Viruses - 51; Other Eukaryotes - 3832 (source: NCBI BLink). & (reliability: 1496.0) & (original description: Putative wg241, Description = E1A-binding protein p400, PFAM = PF13921;PF07529)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00027615ctg000_3368-10981' '(at1g67370 : 595.0) meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal.; ASYNAPTIC 1 (ASY1); CONTAINS InterPro DOMAIN/s: SWIRM (InterPro:IPR007526), DNA-binding HORMA (InterPro:IPR003511); BEST Arabidopsis thaliana protein match is: DNA-binding HORMA family protein (TAIR:AT4G32200.1); Has 527 Blast hits to 490 proteins in 159 species: Archae - 0; Bacteria - 18; Metazoa - 158; Fungi - 114; Plants - 58; Viruses - 21; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|39851 : 183.0) no description available & (gnl|cdd|85949 : 144.0) no description available & (reliability: 1190.0) & (original description: Putative ASY1, Description = Asynaptic 1, PFAM = PF02301)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00027918ctg002_1-5419' '(at4g11560 : 360.0) bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Transcription elongation factor S-II, central domain (InterPro:IPR003618); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT2G25120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37097 : 187.0) no description available & (gnl|cdd|72853 : 167.0) no description available & (reliability: 720.0) & (original description: Putative At4g11560, Description = Bromo-adjacent-like (BAH) domain protein, PFAM = PF07500;PF01426)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00029122ctg014_1-611' '(gnl|cdd|68508 : 128.0) no description available & (at3g17450 : 124.0) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative BnaC09g31880D, Description = BnaC09g31880D protein, PFAM = PF04937)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00029454ctg014_8303-10758' '(at1g75560 : 171.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: cold shock domain protein 1 (TAIR:AT4G36020.1); Has 19425 Blast hits to 13089 proteins in 377 species: Archae - 0; Bacteria - 14; Metazoa - 2237; Fungi - 1342; Plants - 858; Viruses - 14254; Other Eukaryotes - 720 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative GIS2, Description = DNA-binding protein HEXBP, PFAM = PF00098;PF00098;PF00098;PF00098;PF00098;PF00098;PF13917)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00029945ctg008_2542-8002' '(at1g14410 : 304.0) Encodes a homolog of the potato p24 protein. Binds single strand telomeric repeats. Negatively regulates telomerase activity and telomere length.; WHIRLY 1 (WHY1); FUNCTIONS IN: DNA binding, telomeric DNA binding; INVOLVED IN: negative regulation of telomere maintenance via telomerase, defense response; LOCATED IN: plastid chromosome, chloroplast, nucleoid, telomerase holoenzyme complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Plant transcription factor (InterPro:IPR013742); BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT2G02740.2); Has 106 Blast hits to 105 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|71964 : 248.0) no description available & (reliability: 608.0) & (original description: Putative WHY1, Description = Single-stranded DNA-binding protein WHY1, chloroplastic, PFAM = PF08536)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00031438ctg001_3310-11759' '(at1g67370 : 614.0) meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal.; ASYNAPTIC 1 (ASY1); CONTAINS InterPro DOMAIN/s: SWIRM (InterPro:IPR007526), DNA-binding HORMA (InterPro:IPR003511); BEST Arabidopsis thaliana protein match is: DNA-binding HORMA family protein (TAIR:AT4G32200.1); Has 527 Blast hits to 490 proteins in 159 species: Archae - 0; Bacteria - 18; Metazoa - 158; Fungi - 114; Plants - 58; Viruses - 21; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|39851 : 179.0) no description available & (gnl|cdd|85949 : 143.0) no description available & (reliability: 1228.0) & (original description: Putative ASY1, Description = Asynaptic 1, PFAM = PF02301)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00031438ctg001_5281-11871' '(at1g67370 : 452.0) meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal.; ASYNAPTIC 1 (ASY1); CONTAINS InterPro DOMAIN/s: SWIRM (InterPro:IPR007526), DNA-binding HORMA (InterPro:IPR003511); BEST Arabidopsis thaliana protein match is: DNA-binding HORMA family protein (TAIR:AT4G32200.1); Has 527 Blast hits to 490 proteins in 159 species: Archae - 0; Bacteria - 18; Metazoa - 158; Fungi - 114; Plants - 58; Viruses - 21; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|39851 : 180.0) no description available & (gnl|cdd|85949 : 139.0) no description available & (reliability: 904.0) & (original description: Putative ASY1, Description = Asynaptic 1, PFAM = PF02301)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00031570ctg001_962-3923' '(at5g09450 : 339.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G02820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 678.0) & (original description: Putative At5g09450, Description = Pentatricopeptide repeat-containing protein At5g09450, mitochondrial, PFAM = PF13812)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00033405ctg008_1-2450' '(at1g23230 : 145.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629). & (gnl|cdd|37094 : 93.2) no description available & (reliability: 290.0) & (original description: Putative MED23, Description = Mediator of RNA polymerase II transcription subunit 23, PFAM = )' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00034335ctg000_12603-15702' '(at5g49700 : 156.0) Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT1G14490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86345 : 120.0) no description available & (reliability: 312.0) & (original description: Putative AHL17, Description = AT-hook motif nuclear-localized protein 17, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00036798ctg002_682-3627' '(at2g41870 : 124.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G57540.1); Has 469 Blast hits to 467 proteins in 36 species: Archae - 0; Bacteria - 7; Metazoa - 9; Fungi - 6; Plants - 437; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative MTR_1g052560, Description = Carboxy-terminal region remorin, PFAM = PF03763)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00041452ctg000_6545-18795' '(at3g45630 : 351.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|37279 : 221.0) no description available & (gnl|cdd|34774 : 218.0) no description available & (reliability: 686.0) & (original description: Putative NOT4, Description = CCR4-NOT transcription complex subunit 4, PFAM = PF14570;PF00076)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00043892ctg004_2160-6967' '(at1g19340 : 386.0) Methyltransferase MT-A70 family protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), MT-A70 (InterPro:IPR007757); Has 622 Blast hits to 622 proteins in 244 species: Archae - 4; Bacteria - 240; Metazoa - 93; Fungi - 88; Plants - 72; Viruses - 2; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|37567 : 148.0) no description available & (gnl|cdd|68631 : 108.0) no description available & (reliability: 772.0) & (original description: Putative At1g19340, Description = Methyltransferase-like protein 2, PFAM = PF05063)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00047047ctg000_9497-15956' '(at1g04950 : 584.0) Encodes one of two Arabidopsis proteins with significant similarity to the histone fold TBP-associated factor TAF6. Mutants are embryo lethal and transmission of the mutant allele through the male gametophyte is significantly reduced. This is due to reduced pollen tube growth of the mutant.; TATA BOX ASSOCIATED FACTOR II 59 (TAFII59); FUNCTIONS IN: RNA polymerase II transcription factor activity, DNA binding, transcription initiation factor activity; INVOLVED IN: pollen tube growth, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1546 (InterPro:IPR011442), Histone-fold (InterPro:IPR009072), TATA box binding protein associated factor (TAF) (InterPro:IPR004823); BEST Arabidopsis thaliana protein match is: TBP-ASSOCIATED FACTOR 6B (TAIR:AT1G54360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37760 : 450.0) no description available & (gnl|cdd|34698 : 359.0) no description available & (reliability: 1168.0) & (original description: Putative TAF6, Description = Transcription initiation factor TFIID subunit 6, PFAM = PF07571;PF02969)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00047859ctg000_9129-12569' '(at1g73230 : 167.0) Nascent polypeptide-associated complex NAC; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: basic transcription factor 3 (TAIR:AT1G17880.1); Has 832 Blast hits to 832 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 423; Fungi - 174; Plants - 145; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (gnl|cdd|37451 : 155.0) no description available & (reliability: 334.0) & (original description: Putative BTF3, Description = Basic transcription factor 3, PFAM = PF01849)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00048849ctg003_1-11259' '(at5g18230 : 298.0) transcription regulator NOT2/NOT3/NOT5 family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: negative regulation of transcription, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282), CCR4-NOT complex, subunit 3/ 5 (InterPro:IPR012270), Not CCR4-Not complex component, N-terminal (InterPro:IPR007207); BEST Arabidopsis thaliana protein match is: NOT2 / NOT3 / NOT5 family (TAIR:AT1G07705.2); Has 3972 Blast hits to 2940 proteins in 410 species: Archae - 18; Bacteria - 365; Metazoa - 1231; Fungi - 912; Plants - 255; Viruses - 11; Other Eukaryotes - 1180 (source: NCBI BLink). & (gnl|cdd|86527 : 121.0) no description available & (gnl|cdd|37361 : 117.0) no description available & (reliability: 596.0) & (original description: Putative NOT3, Description = CCR4-NOT transcription complex subunit 3, PFAM = PF04065)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00054766ctg000_4911-16133' '(at5g60410 : 253.0) Encodes a plant small ubiquitin-like modifier (SUMO) E3 ligase that is a focal controller of Pi starvation-dependent responses. Also required for SA and PAD4-mediated R gene signalling, which in turn confers innate immunity in Arabidopsis. Also involved in the regulation of plant growth, drought responses and freezing tolerance. This latter effect is most likely due to SIZ1 dependent ABI5 sumoylation. Regulates leaf cell division and expansion through salicylic acid accumulation. signaling; SIZ1; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), Zinc finger, MIZ-type (InterPro:IPR004181), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative IVD, Description = E3 SUMO-protein ligase SIZ1, PFAM = PF02037;PF00628)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00055004ctg000_7880-12332' '(at5g27460 : 430.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G02150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 860.0) & (original description: Putative At5g27460, Description = Pentatricopeptide repeat-containing protein At5g27460, PFAM = PF13812;PF01535;PF01535)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben044scf00056293ctg002_1-6525' '(at2g33620 : 174.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 148.0) no description available & (reliability: 348.0) & (original description: Putative AHL10, Description = AT-hook motif nuclear-localized protein 10, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00091_121911-125738' '(at3g05675 : 88.2) BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10800.1); Has 259 Blast hits to 259 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative glysoja_010289, Description = BTB/POZ domain-containing protein, PFAM = )' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00158_400662-407285' '(at2g18090 : 229.0) PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), SWIB/MDM2 domain (InterPro:IPR003121), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), GYF (InterPro:IPR003169), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding (TAIR:AT3G51120.1); Has 1270 Blast hits to 1121 proteins in 190 species: Archae - 0; Bacteria - 166; Metazoa - 513; Fungi - 60; Plants - 433; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative NERD, Description = Zinc finger CCCH domain-containing protein 44, PFAM = PF02213;PF13771)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00163_316417-322504' '(at4g12050 : 130.0) Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT4G22810.1); Has 6654 Blast hits to 4300 proteins in 274 species: Archae - 0; Bacteria - 187; Metazoa - 2435; Fungi - 660; Plants - 926; Viruses - 16; Other Eukaryotes - 2430 (source: NCBI BLink). & (gnl|cdd|86345 : 124.0) no description available & (reliability: 260.0) & (original description: Putative AGF1, Description = AT hook motif DNA-binding family protein, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00168_353470-356870' '(at4g17410 : 250.0) DWNN domain, a CCHC-type zinc finger; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: DWNN domain (InterPro:IPR014891); BEST Arabidopsis thaliana protein match is: DWNN domain, a CCHC-type zinc finger (TAIR:AT5G47430.1). & (gnl|cdd|35535 : 139.0) no description available & (gnl|cdd|34819 : 124.0) no description available & (reliability: 496.0) & (original description: Putative dl4735w, Description = DWNN domain, A CCHC-type zinc finger protein, PFAM = PF13696;PF08783)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00317_647810-651998' '(at4g02820 : 592.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G02150.1); Has 15018 Blast hits to 7498 proteins in 232 species: Archae - 0; Bacteria - 55; Metazoa - 87; Fungi - 92; Plants - 14442; Viruses - 0; Other Eukaryotes - 342 (source: NCBI BLink). & (reliability: 1184.0) & (original description: Putative At4g02820, Description = Pentatricopeptide repeat-containing protein At4g02820, mitochondrial, PFAM = PF01535;PF01535;PF17177;PF13041)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00321_475356-492160' '(at5g55390 : 677.0) Encodes EDM2 (enhanced downy mildew 2). The predicted protein bears typical features of transcriptional regulators. EDM2 contains two putative bipartite nuclear localization signals (NLS) two zinc-finger-like motifs, a Proline-rich region and a large aspartic acid-rich region. Both zinc-finger-like stretches resemble the PHD (plant homeodomain) finger motif. Mutations in EDM2 comprise RPP7 mediated resistance against Hyaloperonospora parasitica isolate Hiks1 (HpHiks1). EDM2 may function as a direct or indirect regulator of RPP7 expression.; ENHANCED DOWNY MILDEW 2 (EDM2); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: EDM2-like protein1 (TAIR:AT5G48090.1). & (reliability: 1354.0) & (original description: Putative ELP1, Description = PHD finger-containing protein, PFAM = PF12047)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00327_36637-40498' '(at5g24450 : 452.0) Transcription factor IIIC, subunit 5; CONTAINS InterPro DOMAIN/s: Transcription factor IIIC, subunit 5 (InterPro:IPR019136); BEST Arabidopsis thaliana protein match is: Transcription factor IIIC, subunit 5 (TAIR:AT3G49410.1); Has 680 Blast hits to 642 proteins in 201 species: Archae - 0; Bacteria - 19; Metazoa - 202; Fungi - 159; Plants - 80; Viruses - 10; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|37684 : 243.0) no description available & (reliability: 904.0) & (original description: Putative BnaAnng17860D, Description = BnaAnng17860D protein, PFAM = PF09734)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00358_63083-81575' '(at1g77250 : 309.0) RING/FYVE/PHD-type zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 9 (TAIR:AT3G01460.1); Has 5001 Blast hits to 3477 proteins in 217 species: Archae - 2; Bacteria - 0; Metazoa - 3203; Fungi - 426; Plants - 950; Viruses - 0; Other Eukaryotes - 420 (source: NCBI BLink). & (reliability: 618.0) & (original description: Putative BnaA07g33420D, Description = BnaA07g33420D protein, PFAM = PF00628;PF00628)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00358_77918-82012' '(at1g77250 : 262.0) RING/FYVE/PHD-type zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 9 (TAIR:AT3G01460.1); Has 5001 Blast hits to 3477 proteins in 217 species: Archae - 2; Bacteria - 0; Metazoa - 3203; Fungi - 426; Plants - 950; Viruses - 0; Other Eukaryotes - 420 (source: NCBI BLink). & (reliability: 524.0) & (original description: Putative PGSC0003DMG400018006, Description = PHD finger family protein, PFAM = PF00628;PF00628)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00381_127910-132477' '(gnl|cdd|86345 : 122.0) no description available & (at2g33620 : 115.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative TIDP2696, Description = AT-hook protein 1, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00389_128156-133346' '(at4g15020 : 712.0) hAT transposon superfamily; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT3G22220.2); Has 879 Blast hits to 805 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 863; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|68508 : 202.0) no description available & (reliability: 1382.0) & (original description: Putative dl3551w, Description = Putative uncharacterized protein AT4g15020, PFAM = PF05699;PF02892;PF04937)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00397_252141-290047' '(at1g02080 : 2654.0) transcription regulators; FUNCTIONS IN: transcription regulator activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CCR4-Not complex component, Not1 (InterPro:IPR007196). & (gnl|cdd|86522 : 549.0) no description available & (gnl|cdd|37042 : 513.0) no description available & (reliability: 5308.0) & (original description: Putative cnot1, Description = CCR4-NOT transcription complex subunit 1, PFAM = PF16415;PF04054;PF12842;PF16418;PF16417)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00597_47919-52928' '(gnl|cdd|37778 : 180.0) no description available & (at3g07030 : 170.0) Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein (InterPro:IPR002775); BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein (TAIR:AT1G76010.1); Has 449 Blast hits to 441 proteins in 135 species: Archae - 3; Bacteria - 20; Metazoa - 178; Fungi - 24; Plants - 137; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|85767 : 82.9) no description available & (reliability: 310.0) & (original description: Putative umc1204, Description = DNA/RNA-binding protein Alba-like protein, PFAM = PF01918)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00683_472181-478392' '(at1g04950 : 593.0) Encodes one of two Arabidopsis proteins with significant similarity to the histone fold TBP-associated factor TAF6. Mutants are embryo lethal and transmission of the mutant allele through the male gametophyte is significantly reduced. This is due to reduced pollen tube growth of the mutant.; TATA BOX ASSOCIATED FACTOR II 59 (TAFII59); FUNCTIONS IN: RNA polymerase II transcription factor activity, DNA binding, transcription initiation factor activity; INVOLVED IN: pollen tube growth, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1546 (InterPro:IPR011442), Histone-fold (InterPro:IPR009072), TATA box binding protein associated factor (TAF) (InterPro:IPR004823); BEST Arabidopsis thaliana protein match is: TBP-ASSOCIATED FACTOR 6B (TAIR:AT1G54360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37760 : 455.0) no description available & (gnl|cdd|34698 : 362.0) no description available & (reliability: 1186.0) & (original description: Putative TAF6, Description = Transcription initiation factor TFIID subunit 6, PFAM = PF02969;PF07571)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00735_502868-506813' '(at2g41870 : 123.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G57540.1); Has 469 Blast hits to 467 proteins in 36 species: Archae - 0; Bacteria - 7; Metazoa - 9; Fungi - 6; Plants - 437; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|67381 : 103.0) no description available & (reliability: 246.0) & (original description: Putative At2g41870, Description = Putative DNA binding protein, PFAM = PF03763)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00777_301716-308418' '(at5g11430 : 398.0) SPOC domain / Transcription elongation factor S-II protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Spen paralogue and orthologue SPOC, C-terminal (InterPro:IPR012921), Transcription elongation factor S-IIM (InterPro:IPR017890), Transcription elongation factor S-II, central domain (InterPro:IPR003618); BEST Arabidopsis thaliana protein match is: SPOC domain / Transcription elongation factor S-II protein (TAIR:AT5G25520.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36847 : 238.0) no description available & (gnl|cdd|87289 : 121.0) no description available & (reliability: 796.0) & (original description: Putative phf3, Description = BnaCnng08410D protein, PFAM = PF07500;PF07744)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00793_688709-708024' '(at1g02370 : 434.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G01990.1); Has 6320 Blast hits to 3912 proteins in 155 species: Archae - 0; Bacteria - 6; Metazoa - 44; Fungi - 46; Plants - 6080; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 868.0) & (original description: Putative At1g02370, Description = Os01g0301000 protein, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00812_337842-351300' '(at4g09980 : 756.0) EMBRYO DEFECTIVE 1691 (EMB1691); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), MT-A70 (InterPro:IPR007757); BEST Arabidopsis thaliana protein match is: mRNAadenosine methylase (TAIR:AT4G10760.1); Has 29929 Blast hits to 18009 proteins in 1024 species: Archae - 39; Bacteria - 4517; Metazoa - 16101; Fungi - 2453; Plants - 1900; Viruses - 259; Other Eukaryotes - 4660 (source: NCBI BLink). & (gnl|cdd|37308 : 476.0) no description available & (gnl|cdd|68631 : 181.0) no description available & (q2hvd6|mta70_medtr : 125.0) Putative N6-adenosine-methyltransferase MT-A70-like (EC 2.1.1.62) - Medicago truncatula (Barrel medic) & (reliability: 1512.0) & (original description: Putative EMB1691, Description = Methyltransferase-like protein 1, PFAM = PF05063)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00867_116903-121346' '(at5g07030 : 482.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G54400.1); Has 3400 Blast hits to 3386 proteins in 327 species: Archae - 0; Bacteria - 0; Metazoa - 917; Fungi - 461; Plants - 1890; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|36553 : 194.0) no description available & (reliability: 964.0) & (original description: Putative AED3, Description = Aspartyl protease AED3, PFAM = PF14543;PF14541)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00883_675306-679713' '(at1g75560 : 220.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: cold shock domain protein 1 (TAIR:AT4G36020.1); Has 19425 Blast hits to 13089 proteins in 377 species: Archae - 0; Bacteria - 14; Metazoa - 2237; Fungi - 1342; Plants - 858; Viruses - 14254; Other Eukaryotes - 720 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative pco105342b, Description = DNA-binding protein HEXBP, PFAM = PF00098;PF00098;PF00098;PF00098;PF00098;PF00098;PF00098;PF00098;PF13917)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00929_292341-301200' '(at1g19340 : 417.0) Methyltransferase MT-A70 family protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), MT-A70 (InterPro:IPR007757); Has 622 Blast hits to 622 proteins in 244 species: Archae - 4; Bacteria - 240; Metazoa - 93; Fungi - 88; Plants - 72; Viruses - 2; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|37567 : 151.0) no description available & (gnl|cdd|68631 : 104.0) no description available & (reliability: 834.0) & (original description: Putative At1g19340, Description = Methyltransferase-like protein 2, PFAM = PF05063)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00959_140-3275' '(at1g10200 : 298.0) WLIM1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1); Has 4354 Blast hits to 2727 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 3462; Fungi - 43; Plants - 506; Viruses - 0; Other Eukaryotes - 343 (source: NCBI BLink). & (p29675|sf3_helan : 246.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 155.0) no description available & (reliability: 596.0) & (original description: Putative WLIM1, Description = LIM domain-containing protein WLIM1, PFAM = PF00412;PF00412)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00962_63782-94581' '(at1g77800 : 541.0) PHD finger family protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1). & (gnl|cdd|36172 : 258.0) no description available & (gnl|cdd|34742 : 130.0) no description available & (reliability: 1082.0) & (original description: Putative jade1, Description = Protein Jade-1, PFAM = PF13831;PF13831;PF13832;PF13832)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00971_148333-154947' '(at3g52170 : 108.0) DNA binding; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G58210.4). & (reliability: 216.0) & (original description: Putative PEND, Description = Plastid DNA-binding protein, PFAM = )' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf00974_230956-244761' '(at1g13790 : 320.0) XH/XS domain-containing protein; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379), Domain of unknown function, putative Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT3G48670.2); Has 49019 Blast hits to 30980 proteins in 1872 species: Archae - 565; Bacteria - 6337; Metazoa - 23607; Fungi - 3326; Plants - 1659; Viruses - 198; Other Eukaryotes - 13327 (source: NCBI BLink). & (gnl|cdd|67105 : 130.0) no description available & (reliability: 640.0) & (original description: Putative x1, Description = XH/XS domain protein, PFAM = PF03469;PF03468)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01018_370219-405406' '(at3g24870 : 777.0) Helicase/SANT-associated, DNA binding protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), HSA (InterPro:IPR006562), Homeodomain-like (InterPro:IPR009057), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Helicase/SANT-associated, DNA binding protein (TAIR:AT3G24880.1). & (reliability: 1554.0) & (original description: Putative wg241, Description = E1A-binding protein p400, PFAM = PF07529;PF13921)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01051_1021658-1028071' '(at4g12080 : 246.0) AT-hook motif nuclear-localized protein 1 (AHL1); FUNCTIONS IN: DNA binding; LOCATED IN: mitochondrion, nucleolus, nucleus, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G22770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 140.0) no description available & (reliability: 492.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01051_1098740-1101962' '(at2g45430 : 203.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 134.0) no description available & (reliability: 394.0) & (original description: Putative Os02g0448000, Description = Os02g0448000 protein, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01061_410482-444201' '(at1g30680 : 323.0) toprim domain-containing protein; FUNCTIONS IN: DNA helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: DNA replication, DNA metabolic process; CONTAINS InterPro DOMAIN/s: Toprim domain, subgroup (InterPro:IPR006154), DNA helicase, DnaB-like, C-terminal (InterPro:IPR007694), Toprim domain (InterPro:IPR006171); BEST Arabidopsis thaliana protein match is: nucleic acid binding;nucleic acid binding (TAIR:AT1G30660.1); Has 1118 Blast hits to 1106 proteins in 217 species: Archae - 0; Bacteria - 270; Metazoa - 48; Fungi - 0; Plants - 77; Viruses - 127; Other Eukaryotes - 596 (source: NCBI BLink). & (reliability: 606.0) & (original description: Putative PEO1, Description = DNA helicase, DnaB-like, C-terminal, PFAM = PF13662)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01061_933458-948584' '(at2g19260 : 170.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, CW-type (InterPro:IPR011124), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: metalloendopeptidases;zinc ion binding;DNA binding (TAIR:AT5G35210.1); Has 1801 Blast hits to 1744 proteins in 174 species: Archae - 2; Bacteria - 8; Metazoa - 1171; Fungi - 140; Plants - 342; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative Sb10g026366, Description = Putative uncharacterized protein Sb10g026366, PFAM = PF00628;PF01448)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01073_172651-176865' '(at1g67590 : 226.0) Remorin family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT2G02170.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67381 : 109.0) no description available & (reliability: 452.0) & (original description: Putative BnaC06g28630D, Description = BnaC06g28630D protein, PFAM = PF03763)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01180_10448-16720' '(at4g12080 : 217.0) AT-hook motif nuclear-localized protein 1 (AHL1); FUNCTIONS IN: DNA binding; LOCATED IN: mitochondrion, nucleolus, nucleus, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G22770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 138.0) no description available & (reliability: 434.0) & (original description: Putative AHL1, Description = AT-hook motif nuclear-localized protein 1, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01203_129711-140760' '(at1g29220 : 182.0) transcriptional regulator family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HCNGP-like (InterPro:IPR012479). & (gnl|cdd|87378 : 104.0) no description available & (reliability: 364.0) & (original description: Putative Ccrd_020963, Description = HCNGP-like protein, PFAM = PF07818)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01257_43745-53423' '(at2g46040 : 229.0) ARID/BRIGHT DNA-binding domain;ELM2 domain protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: sperm cell, male gametophyte, cultured cell, seed, pollen tube; EXPRESSED DURING: M germinated pollen stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ELM2 (InterPro:IPR000949), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain;ELM2 domain protein (TAIR:AT4G11400.1); Has 198 Blast hits to 184 proteins in 31 species: Archae - 0; Bacteria - 1; Metazoa - 35; Fungi - 2; Plants - 156; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative ARID1, Description = AT-rich interactive domain-containing protein 1, PFAM = )' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01300_2795-15434' '(at5g15020 : 1061.0) Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190).; SIN3-like 2 (SNL2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 1 (TAIR:AT3G01320.1). & (gnl|cdd|39405 : 224.0) no description available & (gnl|cdd|35161 : 157.0) no description available & (reliability: 2122.0) & (original description: Putative SNL1, Description = Paired amphipathic helix protein Sin3-like 4, PFAM = PF16879;PF02671;PF02671;PF02671)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01301_425-7617' '(at1g80270 : 557.0) PENTATRICOPEPTIDE REPEAT 596 (PPR596); FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G15480.1); Has 12069 Blast hits to 5943 proteins in 220 species: Archae - 0; Bacteria - 13; Metazoa - 132; Fungi - 119; Plants - 11568; Viruses - 0; Other Eukaryotes - 237 (source: NCBI BLink). & (reliability: 1114.0) & (original description: Putative At1g80270, Description = Pentatricopeptide repeat-containing protein At1g80270, mitochondrial, PFAM = PF13812;PF01535;PF01535;PF01535)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01326_969952-973979' '(at3g28720 : 758.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58100.1); Has 1610 Blast hits to 344 proteins in 85 species: Archae - 0; Bacteria - 567; Metazoa - 95; Fungi - 71; Plants - 145; Viruses - 0; Other Eukaryotes - 732 (source: NCBI BLink). & (reliability: 1516.0) & (original description: Putative Sb10g022840, Description = Putative uncharacterized protein Sb10g022840, PFAM = )' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01402_138149-149366' '(at5g15020 : 1210.0) Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190).; SIN3-like 2 (SNL2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 1 (TAIR:AT3G01320.1). & (gnl|cdd|39405 : 217.0) no description available & (gnl|cdd|35161 : 178.0) no description available & (reliability: 2420.0) & (original description: Putative SNL2, Description = Paired amphipathic helix protein Sin3-like 2, PFAM = PF02671;PF02671;PF02671;PF08295;PF16879)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01463_728220-732461' '(at1g10200 : 243.0) WLIM1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1); Has 4354 Blast hits to 2727 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 3462; Fungi - 43; Plants - 506; Viruses - 0; Other Eukaryotes - 343 (source: NCBI BLink). & (p29675|sf3_helan : 231.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 140.0) no description available & (reliability: 486.0) & (original description: Putative atl2, Description = Pollen-specific protein SF3, PFAM = PF00412;PF00412)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01526_798210-805456' '(at5g46640 : 151.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G17950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86345 : 133.0) no description available & (reliability: 302.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01557_34096-46870' '(at5g22760 : 724.0) PHD finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain (InterPro:IPR004022), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Zinc finger, PHD-type (InterPro:IPR001965), DDT domain superfamily (InterPro:IPR018501), DDT domain, subgroup (InterPro:IPR018500), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: metalloendopeptidases;zinc ion binding;DNA binding (TAIR:AT5G35210.2); Has 3640 Blast hits to 3265 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 2369; Fungi - 398; Plants - 598; Viruses - 0; Other Eukaryotes - 275 (source: NCBI BLink). & (gnl|cdd|36686 : 380.0) no description available & (reliability: 1448.0) & (original description: Putative At5g22760, Description = Putative ovule protein, PFAM = PF00628;PF02791;PF15612)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01655_297992-302708' '(at2g45820 : 96.3) Remorin family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G61260.1); Has 2543 Blast hits to 1840 proteins in 340 species: Archae - 2; Bacteria - 408; Metazoa - 392; Fungi - 191; Plants - 500; Viruses - 4; Other Eukaryotes - 1046 (source: NCBI BLink). & (p93788|remo_soltu : 92.0) Remorin (pp34) - Solanum tuberosum (Potato) & (reliability: 192.6) & (original description: Putative rem-2, Description = Remorin 2, PFAM = PF03763;PF03766)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01697_1879175-1890178' '(at5g46640 : 172.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G17950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86345 : 146.0) no description available & (reliability: 344.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01718_229538-242036' '(gnl|cdd|80458 : 102.0) no description available & (at1g34360 : 96.7) translation initiation factor 3 (IF-3) family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Translation initiation factor 3, N-terminal (InterPro:IPR019814), Translation initiation factor 3, C-terminal (InterPro:IPR019815), Translation initiation factor 3 (InterPro:IPR001288); BEST Arabidopsis thaliana protein match is: Translation initiation factor 3 protein (TAIR:AT2G24060.1); Has 45300 Blast hits to 30219 proteins in 3054 species: Archae - 48; Bacteria - 10638; Metazoa - 13046; Fungi - 7368; Plants - 4879; Viruses - 1090; Other Eukaryotes - 8231 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative infC, Description = Translation initiation factor if-3, putative, PFAM = PF05198)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01731_13836-16495' '(at4g22810 : 182.0) Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT4G12050.1); Has 813 Blast hits to 808 proteins in 45 species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 2; Plants - 764; Viruses - 2; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|86345 : 129.0) no description available & (reliability: 364.0) & (original description: Putative AHL18, Description = AT-hook motif nuclear-localized protein 18, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01752_903008-909480' '(at1g04950 : 587.0) Encodes one of two Arabidopsis proteins with significant similarity to the histone fold TBP-associated factor TAF6. Mutants are embryo lethal and transmission of the mutant allele through the male gametophyte is significantly reduced. This is due to reduced pollen tube growth of the mutant.; TATA BOX ASSOCIATED FACTOR II 59 (TAFII59); FUNCTIONS IN: RNA polymerase II transcription factor activity, DNA binding, transcription initiation factor activity; INVOLVED IN: pollen tube growth, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1546 (InterPro:IPR011442), Histone-fold (InterPro:IPR009072), TATA box binding protein associated factor (TAF) (InterPro:IPR004823); BEST Arabidopsis thaliana protein match is: TBP-ASSOCIATED FACTOR 6B (TAIR:AT1G54360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37760 : 446.0) no description available & (gnl|cdd|34698 : 345.0) no description available & (reliability: 1174.0) & (original description: Putative pco097658, Description = Putative TATA binding protein family protein, PFAM = PF07571;PF02969)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01795_102269-119728' '(at3g04590 : 169.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: DNA-binding family protein (TAIR:AT5G28590.1); Has 3387 Blast hits to 3069 proteins in 223 species: Archae - 0; Bacteria - 59; Metazoa - 1696; Fungi - 298; Plants - 799; Viruses - 15; Other Eukaryotes - 520 (source: NCBI BLink). & (gnl|cdd|86345 : 122.0) no description available & (reliability: 338.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01798_821345-824487' '(at1g73230 : 171.0) Nascent polypeptide-associated complex NAC; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: basic transcription factor 3 (TAIR:AT1G17880.1); Has 832 Blast hits to 832 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 423; Fungi - 174; Plants - 145; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (gnl|cdd|37451 : 152.0) no description available & (reliability: 342.0) & (original description: Putative BTF3, Description = Basic transcription factor 3, PFAM = PF01849)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01818_236889-246404' '(at3g45630 : 361.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|37279 : 220.0) no description available & (gnl|cdd|34774 : 219.0) no description available & (reliability: 700.0) & (original description: Putative BnaC03g55430D, Description = BnaC03g55430D protein, PFAM = PF00076;PF14570)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01824_155806-161437' '(p93788|remo_soltu : 102.0) Remorin (pp34) - Solanum tuberosum (Potato) & (at3g61260 : 95.1) Remorin family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT2G45820.1); Has 8155 Blast hits to 5353 proteins in 884 species: Archae - 12; Bacteria - 2269; Metazoa - 1454; Fungi - 651; Plants - 718; Viruses - 174; Other Eukaryotes - 2877 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative REM2, Description = Remorin 2, PFAM = PF03763)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf01852_494414-498980' '(at1g75560 : 223.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: cold shock domain protein 1 (TAIR:AT4G36020.1); Has 19425 Blast hits to 13089 proteins in 377 species: Archae - 0; Bacteria - 14; Metazoa - 2237; Fungi - 1342; Plants - 858; Viruses - 14254; Other Eukaryotes - 720 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative GIS2, Description = Zinc finger protein GIS2, PFAM = PF00098;PF00098;PF00098;PF00098;PF00098;PF00098;PF00098;PF00098;PF13917)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02066_145401-154219' '(at3g48670 : 473.0) Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway.; INVOLVED IN DE NOVO 2 (IDN2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion, chromatin silencing, DNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379), Domain of unknown function, putative Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT3G12550.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67105 : 164.0) no description available & (reliability: 946.0) & (original description: Putative At5g59390, Description = Transcription regulator-like, PFAM = PF03469;PF03468;PF03470;PF03470;PF03470;PF03470;PF03470;PF03470;PF03470;PF03470)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02210_1184563-1193270' '(at1g80270 : 565.0) PENTATRICOPEPTIDE REPEAT 596 (PPR596); FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G15480.1); Has 12069 Blast hits to 5943 proteins in 220 species: Archae - 0; Bacteria - 13; Metazoa - 132; Fungi - 119; Plants - 11568; Viruses - 0; Other Eukaryotes - 237 (source: NCBI BLink). & (reliability: 1130.0) & (original description: Putative At1g80270, Description = Pentatricopeptide repeat-containing protein At1g80270, mitochondrial, PFAM = PF13812;PF17177)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02221_96908-108865' '(at5g05660 : 876.0) Encodes a homolog of the mammalian zinc finger transcription factor NF-X1.; ATNFXL2; FUNCTIONS IN: zinc ion binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NF-X1-type (InterPro:IPR000967), Zinc finger, PHD-type, conserved site (InterPro:IPR019786); BEST Arabidopsis thaliana protein match is: NF-X-like 1 (TAIR:AT1G10170.1); Has 10412 Blast hits to 5299 proteins in 265 species: Archae - 4; Bacteria - 94; Metazoa - 8397; Fungi - 425; Plants - 250; Viruses - 11; Other Eukaryotes - 1231 (source: NCBI BLink). & (gnl|cdd|37163 : 442.0) no description available & (reliability: 1752.0) & (original description: Putative NFXL2, Description = NF-X1-type zinc finger protein NFXL2, PFAM = PF01422;PF01422;PF01422;PF01422;PF01422;PF01422;PF01422;PF01422;PF01422;PF01422)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02235_9923-64451' '(at5g18230 : 818.0) transcription regulator NOT2/NOT3/NOT5 family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: negative regulation of transcription, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282), CCR4-NOT complex, subunit 3/ 5 (InterPro:IPR012270), Not CCR4-Not complex component, N-terminal (InterPro:IPR007207); BEST Arabidopsis thaliana protein match is: NOT2 / NOT3 / NOT5 family (TAIR:AT1G07705.2); Has 3972 Blast hits to 2940 proteins in 410 species: Archae - 18; Bacteria - 365; Metazoa - 1231; Fungi - 912; Plants - 255; Viruses - 11; Other Eukaryotes - 1180 (source: NCBI BLink). & (gnl|cdd|37361 : 318.0) no description available & (gnl|cdd|86527 : 315.0) no description available & (reliability: 1636.0) & (original description: Putative cnot3, Description = CCR4-NOT transcription complex subunit 3, PFAM = PF04065;PF04153)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02237_240443-247291' '(at1g10200 : 253.0) WLIM1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1); Has 4354 Blast hits to 2727 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 3462; Fungi - 43; Plants - 506; Viruses - 0; Other Eukaryotes - 343 (source: NCBI BLink). & (p29675|sf3_helan : 238.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 139.0) no description available & (reliability: 506.0) & (original description: Putative SF3, Description = Pollen-specific protein SF3, PFAM = PF00412;PF00412)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02323_322605-328025' '(at5g09450 : 409.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G02820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 818.0) & (original description: Putative At5g09450, Description = Pentatricopeptide repeat-containing protein At5g09450, mitochondrial, PFAM = PF13812)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02325_158386-162474' '(at5g27460 : 452.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G02150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 904.0) & (original description: Putative At5g27460, Description = Pentatricopeptide repeat-containing protein At5g27460, PFAM = PF01535;PF01535;PF13812)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02451_1097377-1109956' '(at3g48670 : 545.0) Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway.; INVOLVED IN DE NOVO 2 (IDN2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion, chromatin silencing, DNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379), Domain of unknown function, putative Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT3G12550.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67105 : 162.0) no description available & (reliability: 1090.0) & (original description: Putative IDN2, Description = Protein INVOLVED IN DE NOVO 2, PFAM = PF03470;PF03468;PF03469)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02463_125229-131004' '(at4g21705 : 401.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G02150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 802.0) & (original description: Putative At4g21705, Description = Pentatricopeptide repeat-containing protein At4g21705, mitochondrial, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF13041)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02494_1221353-1229606' '(at4g25320 : 159.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT5G51590.1); Has 750 Blast hits to 746 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 748; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86345 : 111.0) no description available & (reliability: 318.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02508_1048858-1055367' '(at4g12540 : 160.0) unknown protein; Has 29 Blast hits to 26 proteins in 11 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02552_318133-331243' '(gnl|cdd|37778 : 186.0) no description available & (at1g76010 : 176.0) Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein (InterPro:IPR002775); BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein (TAIR:AT1G20220.1); Has 82924 Blast hits to 30623 proteins in 1819 species: Archae - 80; Bacteria - 18988; Metazoa - 40987; Fungi - 4955; Plants - 6789; Viruses - 861; Other Eukaryotes - 10264 (source: NCBI BLink). & (gnl|cdd|85767 : 83.7) no description available & (reliability: 352.0) & (original description: Putative umc1204, Description = DNA/RNA-binding protein Alba-like protein, PFAM = PF01918)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02606_629841-635257' '(at4g07950 : 105.0) DNA-directed RNA polymerase, subunit M, archaeal; FUNCTIONS IN: in 6 functions; INVOLVED IN: RNA elongation, regulation of transcription, DNA-dependent, transcription, regulation of transcription; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: male gametophyte; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, TFIIS-type (InterPro:IPR001222), DNA-directed RNA polymerase, M/15kDa subunit (InterPro:IPR001529), DNA-directed RNA polymerase, subunit M, archaeal (InterPro:IPR006288), DNA-directed RNA polymerase M, 15kDa subunit, conserved site (InterPro:IPR019761); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase, subunit M, archaeal (TAIR:AT1G01210.1); Has 1132 Blast hits to 1132 proteins in 328 species: Archae - 242; Bacteria - 0; Metazoa - 282; Fungi - 291; Plants - 114; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink). & (gnl|cdd|38117 : 97.7) no description available & (reliability: 194.2) & (original description: Putative Os02g0672700, Description = DNA-directed RNA polymerase subunit, PFAM = PF01096)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02652_270899-277530' '(at4g12080 : 245.0) AT-hook motif nuclear-localized protein 1 (AHL1); FUNCTIONS IN: DNA binding; LOCATED IN: mitochondrion, nucleolus, nucleus, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G22770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 145.0) no description available & (reliability: 490.0) & (original description: Putative AHL1, Description = AT-hook motif nuclear-localized protein 1, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02668_42980-46332' '(at3g22220 : 250.0) hAT transposon superfamily; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68508 : 153.0) no description available & (reliability: 500.0) & (original description: Putative Sb08g005613, Description = Putative uncharacterized protein Sb08g005613, PFAM = PF04937)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02731_410135-419792' '(at5g46640 : 180.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G17950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86345 : 144.0) no description available & (reliability: 360.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02755_151511-154245' '(at5g49700 : 177.0) Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT1G14490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86345 : 106.0) no description available & (reliability: 354.0) & (original description: Putative AHL28, Description = AT-hook motif nuclear-localized protein 28, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02816_1694590-1697564' '(at2g45430 : 195.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 145.0) no description available & (reliability: 360.0) & (original description: Putative AHL22, Description = AT-hook motif nuclear-localized protein 22, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02922_326174-335921' '(at3g05210 : 421.0) encodes a homolog of human ERCC1 protein (yeast RAD10), which is a DNA repair endonuclease. Mutants are sensitive to UV-B and gamma radiation (G2 cell cycle phase arrest) and are defective in dark-repair of pyrimidine pyrimidone dimers. This protein incises the 5' end of damaged DNA, similar to ERCC1/RAD10.; ERCC1; FUNCTIONS IN: 5'-flap endonuclease activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-hairpin-helix DNA-binding motif, class 1 (InterPro:IPR003583), DNA repair protein rad10 (InterPro:IPR004579), RuvA domain 2-like (InterPro:IPR010994); Has 658 Blast hits to 452 proteins in 188 species: Archae - 0; Bacteria - 4; Metazoa - 166; Fungi - 153; Plants - 44; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (gnl|cdd|38052 : 284.0) no description available & (gnl|cdd|34838 : 125.0) no description available & (reliability: 842.0) & (original description: Putative ERCC1, Description = DNA excision repair protein ERCC-1, PFAM = PF03834)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf02996_394721-400246' '(at5g05140 : 263.0) Transcription elongation factor (TFIIS) family protein; FUNCTIONS IN: transcription regulator activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: Transcription elongation factor (TFIIS) family protein (TAIR:AT3G10820.2); Has 741 Blast hits to 730 proteins in 116 species: Archae - 0; Bacteria - 16; Metazoa - 377; Fungi - 33; Plants - 253; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|72135 : 83.0) no description available & (reliability: 526.0) & (original description: Putative MED26B, Description = Probable mediator of RNA polymerase II transcription subunit 26b, PFAM = PF08711)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03075_70312-75624' '(at3g07030 : 183.0) Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein (InterPro:IPR002775); BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein (TAIR:AT1G76010.1); Has 449 Blast hits to 441 proteins in 135 species: Archae - 3; Bacteria - 20; Metazoa - 178; Fungi - 24; Plants - 137; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|37778 : 174.0) no description available & (gnl|cdd|85767 : 81.0) no description available & (reliability: 342.0) & (original description: Putative umc1204, Description = DNA/RNA-binding protein Alba-like protein, PFAM = PF01918)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03170_569597-587677' '(at3g24870 : 961.0) Helicase/SANT-associated, DNA binding protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), HSA (InterPro:IPR006562), Homeodomain-like (InterPro:IPR009057), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Helicase/SANT-associated, DNA binding protein (TAIR:AT3G24880.1). & (reliability: 1922.0) & (original description: Putative Os08g0177300, Description = Putative chromatin modification-related protein EAF1-like, PFAM = PF07529;PF13921)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03224_587171-592797' '(at1g15910 : 537.0) XH/XS domain-containing protein; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379), Domain of unknown function, putative Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT4G00380.1); Has 48628 Blast hits to 29972 proteins in 1836 species: Archae - 567; Bacteria - 5701; Metazoa - 24120; Fungi - 3416; Plants - 1878; Viruses - 163; Other Eukaryotes - 12783 (source: NCBI BLink). & (gnl|cdd|67106 : 163.0) no description available & (reliability: 1074.0) & (original description: Putative FDM1, Description = Factor of DNA methylation 1, PFAM = PF03468;PF03470;PF03469)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03226_50114-53486' '(at2g45430 : 221.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 132.0) no description available & (reliability: 426.0) & (original description: Putative AHL24, Description = AT-hook motif nuclear-localized protein 24, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03264_470340-483918' '(at3g08020 : 670.0) PHD finger family protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD-type zinc finger family protein (TAIR:AT3G52100.1); Has 2616 Blast hits to 2466 proteins in 178 species: Archae - 0; Bacteria - 13; Metazoa - 2009; Fungi - 82; Plants - 239; Viruses - 0; Other Eukaryotes - 273 (source: NCBI BLink). & (gnl|cdd|39644 : 376.0) no description available & (reliability: 1340.0) & (original description: Putative Os12g0527800, Description = Os12g0527800 protein, PFAM = )' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03321_339506-342555' '(at3g17450 : 165.0) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|68508 : 142.0) no description available & (reliability: 330.0) & (original description: Putative BnaA07g02460D, Description = BnaA07g02460D protein, PFAM = PF04937)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03370_790969-796181' '(at5g05140 : 292.0) Transcription elongation factor (TFIIS) family protein; FUNCTIONS IN: transcription regulator activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: Transcription elongation factor (TFIIS) family protein (TAIR:AT3G10820.2); Has 741 Blast hits to 730 proteins in 116 species: Archae - 0; Bacteria - 16; Metazoa - 377; Fungi - 33; Plants - 253; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|72135 : 84.1) no description available & (reliability: 584.0) & (original description: Putative MED26B, Description = Probable mediator of RNA polymerase II transcription subunit 26b, PFAM = PF08711)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03374_696302-701092' '(at4g12080 : 231.0) AT-hook motif nuclear-localized protein 1 (AHL1); FUNCTIONS IN: DNA binding; LOCATED IN: mitochondrion, nucleolus, nucleus, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G22770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 143.0) no description available & (reliability: 462.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03374_871204-879392' '(at1g63470 : 159.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT1G63480.1); Has 999 Blast hits to 995 proteins in 66 species: Archae - 0; Bacteria - 22; Metazoa - 171; Fungi - 26; Plants - 768; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|86345 : 122.0) no description available & (reliability: 318.0) & (original description: Putative BnaCnng43040D, Description = BnaCnng43040D protein, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03377_236350-251984' '(at2g36740 : 280.0) SWC2; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: YL1 nuclear, C-terminal (InterPro:IPR013272), YL1 nuclear (InterPro:IPR008895); Has 4932 Blast hits to 3253 proteins in 360 species: Archae - 2; Bacteria - 230; Metazoa - 1594; Fungi - 576; Plants - 159; Viruses - 97; Other Eukaryotes - 2274 (source: NCBI BLink). & (gnl|cdd|38108 : 172.0) no description available & (gnl|cdd|69297 : 111.0) no description available & (reliability: 560.0) & (original description: Putative SWC2, Description = SWR1 complex subunit 2, PFAM = PF08265;PF05764)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03417_768-30285' '(at5g10940 : 934.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G45620.1). & (gnl|cdd|36524 : 707.0) no description available & (reliability: 1868.0) & (original description: Putative At5g10940, Description = Putative uncharacterized protein At5g10940, PFAM = PF00400;PF00400)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03424_116173-121867' '(at4g12080 : 87.8) AT-hook motif nuclear-localized protein 1 (AHL1); FUNCTIONS IN: DNA binding; LOCATED IN: mitochondrion, nucleolus, nucleus, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G22770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative AHP1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03449_320717-324441' '(at1g10200 : 306.0) WLIM1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1); Has 4354 Blast hits to 2727 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 3462; Fungi - 43; Plants - 506; Viruses - 0; Other Eukaryotes - 343 (source: NCBI BLink). & (p29675|sf3_helan : 244.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 162.0) no description available & (reliability: 612.0) & (original description: Putative WLIM1, Description = LIM domain-containing protein WLIM1, PFAM = PF00412;PF00412)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03565_869750-874938' '(at1g60770 : 625.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G02370.1); Has 19797 Blast hits to 7926 proteins in 238 species: Archae - 2; Bacteria - 46; Metazoa - 98; Fungi - 130; Plants - 18960; Viruses - 0; Other Eukaryotes - 561 (source: NCBI BLink). & (reliability: 1250.0) & (original description: Putative At1g60770, Description = Pentatricopeptide repeat-containing protein At1g60770, PFAM = PF01535;PF01535;PF01535;PF13812;PF13041)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03648_525389-533654' '(at2g47790 : 480.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1); Has 11741 Blast hits to 7668 proteins in 457 species: Archae - 10; Bacteria - 2663; Metazoa - 3454; Fungi - 3073; Plants - 916; Viruses - 0; Other Eukaryotes - 1625 (source: NCBI BLink). & (gnl|cdd|36402 : 305.0) no description available & (reliability: 960.0) & (original description: Putative At2g47790, Description = At2g47790/F17A22.18, PFAM = PF00400)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03708_359407-362523' '(at1g17880 : 190.0) basic transcription factor 3 (BTF3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: Nascent polypeptide-associated complex NAC (TAIR:AT1G73230.1); Has 841 Blast hits to 841 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 427; Fungi - 178; Plants - 145; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|37451 : 155.0) no description available & (reliability: 360.0) & (original description: Putative BTF3, Description = Basic transcription factor 3, PFAM = PF01849)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03732_627223-632950' '(at2g41350 : 366.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G21980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 732.0) & (original description: Putative 37104, Description = AUGMIN subunit 1, PFAM = )' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03766_1037472-1040929' '(at5g14510 : 224.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G12710.1); Has 1353 Blast hits to 1188 proteins in 147 species: Archae - 0; Bacteria - 0; Metazoa - 35; Fungi - 195; Plants - 1036; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative RCOM_1064640, Description = Ubiquitin-protein ligase, putative, PFAM = )' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03872_230494-234039' '(at5g60800 : 128.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G36950.1). & (reliability: 236.0) & (original description: Putative A15, Description = Heavy metal transport/detoxification superfamily protein, putative, PFAM = PF00403;PF00403)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03872_230497-235555' '(at5g60800 : 128.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G36950.1). & (reliability: 236.0) & (original description: Putative A15, Description = Heavy metal transport/detoxification superfamily protein, putative, PFAM = PF00403;PF00403)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03934_855-10160' '(at1g04020 : 406.0) Encodes a protein containing two tandem BRCA1 C-Terminal (BRCT) domains, which function in phosphorylation-dependent proteinñprotein interactions.Loss of function mutations cause defects in meristem organization due to failure to repress WUS. BARD1 binds to WUS promoter and over expression of BARD reduces the extent of WUS expression.; breast cancer associated RING 1 (BARD1); FUNCTIONS IN: transcription coactivator activity, DNA binding; INVOLVED IN: DNA repair, regulation of meristem structural organization, leaf development; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: breast cancer susceptibility1 (TAIR:AT4G21070.1); Has 6045 Blast hits to 5706 proteins in 320 species: Archae - 0; Bacteria - 47; Metazoa - 4577; Fungi - 362; Plants - 542; Viruses - 11; Other Eukaryotes - 506 (source: NCBI BLink). & (gnl|cdd|39563 : 265.0) no description available & (reliability: 812.0) & (original description: Putative BRCA1, Description = Protein BREAST CANCER SUSCEPTIBILITY 1-like protein, PFAM = PF13771;PF16589;PF00533;PF13445)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03942_288072-294033' '(at4g12540 : 166.0) unknown protein; Has 29 Blast hits to 26 proteins in 11 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf03951_342598-348063' '(at4g12080 : 162.0) AT-hook motif nuclear-localized protein 1 (AHL1); FUNCTIONS IN: DNA binding; LOCATED IN: mitochondrion, nucleolus, nucleus, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G22770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 134.0) no description available & (reliability: 324.0) & (original description: Putative AHL7, Description = AT-hook motif nuclear-localized protein 7, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf04103_939342-946020' '(at4g28830 : 301.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Putative RNA methylase (InterPro:IPR000241), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052); Has 3586 Blast hits to 3586 proteins in 1312 species: Archae - 213; Bacteria - 2970; Metazoa - 118; Fungi - 5; Plants - 52; Viruses - 0; Other Eukaryotes - 228 (source: NCBI BLink). & (gnl|cdd|38630 : 218.0) no description available & (gnl|cdd|32444 : 174.0) no description available & (reliability: 602.0) & (original description: Putative Mettl5, Description = Methyltransferase-like protein 5, PFAM = PF05175)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf04182_337703-346149' '(at3g48670 : 544.0) Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway.; INVOLVED IN DE NOVO 2 (IDN2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion, chromatin silencing, DNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379), Domain of unknown function, putative Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT3G12550.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67105 : 161.0) no description available & (reliability: 1088.0) & (original description: Putative IDN2, Description = Protein INVOLVED IN DE NOVO 2, PFAM = PF03469;PF03470;PF03468)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf04329_19047-39523' '(at1g59453 : 1120.0) B-block binding subunit of TFIIIC; CONTAINS InterPro DOMAIN/s: B-block binding subunit of TFIIIC (InterPro:IPR007309); BEST Arabidopsis thaliana protein match is: B-block binding subunit of TFIIIC (TAIR:AT1G17450.2); Has 138 Blast hits to 121 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 34; Fungi - 3; Plants - 91; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 2240.0) & (original description: Putative , Description = , PFAM = PF04182)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf04367_37547-64686' '(at5g55390 : 805.0) Encodes EDM2 (enhanced downy mildew 2). The predicted protein bears typical features of transcriptional regulators. EDM2 contains two putative bipartite nuclear localization signals (NLS) two zinc-finger-like motifs, a Proline-rich region and a large aspartic acid-rich region. Both zinc-finger-like stretches resemble the PHD (plant homeodomain) finger motif. Mutations in EDM2 comprise RPP7 mediated resistance against Hyaloperonospora parasitica isolate Hiks1 (HpHiks1). EDM2 may function as a direct or indirect regulator of RPP7 expression.; ENHANCED DOWNY MILDEW 2 (EDM2); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: EDM2-like protein1 (TAIR:AT5G48090.1). & (reliability: 1610.0) & (original description: Putative ELP1, Description = DNA (Cytosine-5)-methyltransferase 1, replication foci domain-containing protein, PFAM = PF12047)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf04473_1189805-1195042' '(at5g05140 : 273.0) Transcription elongation factor (TFIIS) family protein; FUNCTIONS IN: transcription regulator activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: Transcription elongation factor (TFIIS) family protein (TAIR:AT3G10820.2); Has 741 Blast hits to 730 proteins in 116 species: Archae - 0; Bacteria - 16; Metazoa - 377; Fungi - 33; Plants - 253; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|72135 : 85.7) no description available & (reliability: 546.0) & (original description: Putative BnaA03g55180D, Description = BnaA03g55180D protein, PFAM = PF08711)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf04549_958982-973878' '(at5g60410 : 1048.0) Encodes a plant small ubiquitin-like modifier (SUMO) E3 ligase that is a focal controller of Pi starvation-dependent responses. Also required for SA and PAD4-mediated R gene signalling, which in turn confers innate immunity in Arabidopsis. Also involved in the regulation of plant growth, drought responses and freezing tolerance. This latter effect is most likely due to SIZ1 dependent ABI5 sumoylation. Regulates leaf cell division and expansion through salicylic acid accumulation. signaling; SIZ1; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), Zinc finger, MIZ-type (InterPro:IPR004181), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37380 : 87.1) no description available & (reliability: 2096.0) & (original description: Putative SIZ1, Description = E3 SUMO-protein ligase SIZ1, PFAM = PF02891;PF00628;PF02037)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf04596_28848-37576' '(at1g51540 : 529.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G27220.1); Has 1998 Blast hits to 1729 proteins in 252 species: Archae - 27; Bacteria - 371; Metazoa - 1276; Fungi - 25; Plants - 123; Viruses - 45; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|39642 : 100.0) no description available & (reliability: 1058.0) & (original description: Putative At3g27220, Description = Kelch repeat-containing protein At3g27220, PFAM = PF13964;PF13418;PF13418)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf04663_434164-440547' '(at5g11430 : 394.0) SPOC domain / Transcription elongation factor S-II protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Spen paralogue and orthologue SPOC, C-terminal (InterPro:IPR012921), Transcription elongation factor S-IIM (InterPro:IPR017890), Transcription elongation factor S-II, central domain (InterPro:IPR003618); BEST Arabidopsis thaliana protein match is: SPOC domain / Transcription elongation factor S-II protein (TAIR:AT5G25520.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36847 : 243.0) no description available & (gnl|cdd|87289 : 118.0) no description available & (reliability: 788.0) & (original description: Putative phf3, Description = BnaCnng08410D protein, PFAM = PF07744;PF07500)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf04742_287994-293158' '(at5g19490 : 175.0) Histone superfamily protein; FUNCTIONS IN: sequence-specific DNA binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C11 (TAIR:AT3G12480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36872 : 164.0) no description available & (gnl|cdd|34844 : 90.5) no description available & (reliability: 350.0) & (original description: Putative drap1, Description = Dr1-associated corepressor, PFAM = PF00808)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf04815_250749-256102' '(at1g56110 : 727.0) NOP56-like protein; homolog of nucleolar protein NOP56 (NOP56); LOCATED IN: nucleolus, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOP5, N-terminal (InterPro:IPR012974), NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: NOP56-like pre RNA processing ribonucleoprotein (TAIR:AT3G12860.1); Has 24182 Blast hits to 12540 proteins in 912 species: Archae - 265; Bacteria - 1523; Metazoa - 8592; Fungi - 2628; Plants - 1300; Viruses - 179; Other Eukaryotes - 9695 (source: NCBI BLink). & (gnl|cdd|37784 : 662.0) no description available & (gnl|cdd|31687 : 325.0) no description available & (reliability: 1454.0) & (original description: Putative nop56, Description = Nucleolar protein 56, PFAM = PF01798;PF08156)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf04878_25356-44726' '(at5g63700 : 357.0) zinc ion binding;DNA binding; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: histone modification, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Plus-3 domain, subgroup (InterPro:IPR018144), SWIB/MDM2 domain (InterPro:IPR003121), Zinc finger, PHD-type (InterPro:IPR001965), Plus-3 (InterPro:IPR004343), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: SWIB/MDM2 domain;Plus-3;GYF (TAIR:AT5G08430.1); Has 1143 Blast hits to 955 proteins in 114 species: Archae - 0; Bacteria - 2; Metazoa - 778; Fungi - 27; Plants - 204; Viruses - 3; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|37157 : 89.4) no description available & (gnl|cdd|47987 : 81.0) no description available & (reliability: 714.0) & (original description: Putative At5g08430, Description = Putative ovule protein, PFAM = PF02201;PF03126)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf04899_36649-40523' '(at4g21705 : 504.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G02150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1008.0) & (original description: Putative At4g21705, Description = Pentatricopeptide repeat-containing protein At4g21705, mitochondrial, PFAM = PF13812;PF01535)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf04899_108719-128287' '(at2g20710 : 271.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G28020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 542.0) & (original description: Putative , Description = , PFAM = PF01535;PF01535;PF01535;PF13041)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05025_972938-978789' '(at3g17450 : 936.0) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|68508 : 250.0) no description available & (reliability: 1872.0) & (original description: Putative At3g17450, Description = HAT dimerization domain-containing protein, PFAM = PF05699;PF02892;PF02892;PF04937)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05047_525127-536797' '(at2g33620 : 148.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 133.0) no description available & (reliability: 296.0) & (original description: Putative TIDP2696, Description = AT-hook protein 1, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05080_232746-242170' '(at1g50620 : 251.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT3G20280.1); Has 3714 Blast hits to 3101 proteins in 414 species: Archae - 4; Bacteria - 443; Metazoa - 1736; Fungi - 538; Plants - 319; Viruses - 13; Other Eukaryotes - 661 (source: NCBI BLink). & (reliability: 502.0) & (original description: Putative PGSC0003DMG402022202, Description = PHD finger protein At3g20280, PFAM = PF01426;PF00628)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05080_233037-242146' '(at1g50620 : 251.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT3G20280.1); Has 3714 Blast hits to 3101 proteins in 414 species: Archae - 4; Bacteria - 443; Metazoa - 1736; Fungi - 538; Plants - 319; Viruses - 13; Other Eukaryotes - 661 (source: NCBI BLink). & (reliability: 502.0) & (original description: Putative PGSC0003DMG402022202, Description = PHD finger protein At3g20280, PFAM = PF01426;PF00628)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05118_443029-451331' '(at2g45820 : 93.6) Remorin family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G61260.1); Has 2543 Blast hits to 1840 proteins in 340 species: Archae - 2; Bacteria - 408; Metazoa - 392; Fungi - 191; Plants - 500; Viruses - 4; Other Eukaryotes - 1046 (source: NCBI BLink). & (p93788|remo_soltu : 91.7) Remorin (pp34) - Solanum tuberosum (Potato) & (gnl|cdd|67381 : 83.5) no description available & (reliability: 187.2) & (original description: Putative DBP, Description = Remorin, PFAM = PF03763)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05118_894884-905994' '(at2g46040 : 221.0) ARID/BRIGHT DNA-binding domain;ELM2 domain protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: sperm cell, male gametophyte, cultured cell, seed, pollen tube; EXPRESSED DURING: M germinated pollen stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ELM2 (InterPro:IPR000949), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain;ELM2 domain protein (TAIR:AT4G11400.1); Has 198 Blast hits to 184 proteins in 31 species: Archae - 0; Bacteria - 1; Metazoa - 35; Fungi - 2; Plants - 156; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative ARID1, Description = AT-rich interactive domain-containing protein 1, PFAM = )' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05151_408158-413376' '(at1g02150 : 626.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G02820.1); Has 10811 Blast hits to 5678 proteins in 200 species: Archae - 0; Bacteria - 11; Metazoa - 28; Fungi - 100; Plants - 10424; Viruses - 0; Other Eukaryotes - 248 (source: NCBI BLink). & (reliability: 1252.0) & (original description: Putative At1g02150, Description = Pentatricopeptide repeat-containing protein At1g02150, PFAM = PF13812;PF01535;PF01535;PF01535)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05201_83158-87268' '(at1g07590 : 608.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: PENTATRICOPEPTIDE REPEAT 596 (TAIR:AT1G80270.3); Has 14416 Blast hits to 6927 proteins in 166 species: Archae - 0; Bacteria - 10; Metazoa - 31; Fungi - 36; Plants - 14001; Viruses - 0; Other Eukaryotes - 338 (source: NCBI BLink). & (reliability: 1216.0) & (original description: Putative At1g07590, Description = Pentatricopeptide repeat-containing protein At1g07590, mitochondrial, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05226_579989-590435' '(at2g33620 : 157.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 136.0) no description available & (reliability: 314.0) & (original description: Putative AHL10, Description = AT-hook motif nuclear-localized protein 10, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05321_444418-476235' '(at5g10940 : 934.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G45620.1). & (gnl|cdd|36524 : 701.0) no description available & (reliability: 1868.0) & (original description: Putative Ccrd_023098, Description = Tetratricopeptide-like helical, PFAM = PF00400;PF12894)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05488_26384-34602' '(at4g09980 : 687.0) EMBRYO DEFECTIVE 1691 (EMB1691); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), MT-A70 (InterPro:IPR007757); BEST Arabidopsis thaliana protein match is: mRNAadenosine methylase (TAIR:AT4G10760.1); Has 29929 Blast hits to 18009 proteins in 1024 species: Archae - 39; Bacteria - 4517; Metazoa - 16101; Fungi - 2453; Plants - 1900; Viruses - 259; Other Eukaryotes - 4660 (source: NCBI BLink). & (gnl|cdd|37308 : 456.0) no description available & (gnl|cdd|68631 : 182.0) no description available & (q2hvd6|mta70_medtr : 122.0) Putative N6-adenosine-methyltransferase MT-A70-like (EC 2.1.1.62) - Medicago truncatula (Barrel medic) & (reliability: 1374.0) & (original description: Putative EMB1691, Description = Methyltransferase-like protein 1, PFAM = PF05063)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05554_509612-514714' '(at1g77860 : 279.0) mutant has Altered morphology of pollen exine wall; Seven-Path Transmembrane Protein; KOMPEITO (KOM); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like 1 (TAIR:AT2G29050.1); Has 4976 Blast hits to 4975 proteins in 1564 species: Archae - 94; Bacteria - 3058; Metazoa - 485; Fungi - 120; Plants - 306; Viruses - 0; Other Eukaryotes - 913 (source: NCBI BLink). & (gnl|cdd|37500 : 210.0) no description available & (gnl|cdd|85618 : 116.0) no description available & (reliability: 558.0) & (original description: Putative KOM, Description = RHOMBOID-like protein 8, PFAM = PF01694)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05772_84185-89509' '(at5g55600 : 605.0) agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: RNA binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395), Bromo adjacent homology (BAH) domain (InterPro:IPR001025); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT1G68580.2). & (gnl|cdd|72861 : 191.0) no description available & (reliability: 1210.0) & (original description: Putative BnaA10g09770D, Description = BnaA10g09770D protein, PFAM = PF05641;PF01426)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05804_181532-199173' '(at5g11430 : 112.0) SPOC domain / Transcription elongation factor S-II protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Spen paralogue and orthologue SPOC, C-terminal (InterPro:IPR012921), Transcription elongation factor S-IIM (InterPro:IPR017890), Transcription elongation factor S-II, central domain (InterPro:IPR003618); BEST Arabidopsis thaliana protein match is: SPOC domain / Transcription elongation factor S-II protein (TAIR:AT5G25520.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative TCM_038158, Description = SPOC domain / Transcription elongation factor S-II protein, putative isoform 1, PFAM = PF07744)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf05912_265448-270813' '(at1g10170 : 1205.0) Encodes AtNFXL1, a homologue of the putative human transcription repressor NF-X1. Functions as a negative regulator of the trichothecene phytotoxin-induced defense response.; NF-X-like 1 (NFXL1); FUNCTIONS IN: zinc ion binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NF-X1-type (InterPro:IPR000967), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors (TAIR:AT5G05660.1); Has 6781 Blast hits to 3735 proteins in 261 species: Archae - 0; Bacteria - 123; Metazoa - 4814; Fungi - 547; Plants - 327; Viruses - 10; Other Eukaryotes - 960 (source: NCBI BLink). & (gnl|cdd|37163 : 710.0) no description available & (reliability: 2410.0) & (original description: Putative NFXL1, Description = NF-X1-type zinc finger protein NFXL1, PFAM = PF01422;PF01422;PF01422;PF01422;PF01422;PF01422;PF01422;PF01422;PF01422)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf06087_1175499-1180019' '(at5g09850 : 234.0) Transcription elongation factor (TFIIS) family protein; FUNCTIONS IN: transcription regulator activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923), Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type (InterPro:IPR003617), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: Transcription elongation factor (TFIIS) family protein (TAIR:AT5G05140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72135 : 86.1) no description available & (reliability: 468.0) & (original description: Putative MED26C, Description = Probable mediator of RNA polymerase II transcription subunit 26c, PFAM = PF08711)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf06189_407432-410172' '(at5g04110 : 130.0) DNA GYRASE B3 (GYRB3); FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, ATP binding; INVOLVED IN: DNA topological change, DNA metabolic process; LOCATED IN: chromosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA topoisomerase, type IIA, subunit B, domain 2 (InterPro:IPR013506), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), DNA topoisomerase, type IIA, subunit B (InterPro:IPR000565), DNA topoisomerase, type IIA, subunit B/N-terminal (InterPro:IPR001241); BEST Arabidopsis thaliana protein match is: DNA GYRASE B2 (TAIR:AT5G04130.1); Has 21414 Blast hits to 21375 proteins in 6002 species: Archae - 105; Bacteria - 17678; Metazoa - 58; Fungi - 26; Plants - 200; Viruses - 8; Other Eukaryotes - 3339 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative , Description = DNA binding protein, putative, PFAM = PF01448)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf06280_112647-115881' '(at3g01320 : 188.0) Encodes SIN3-like 1, a homolog of the transcriptional repressor SIN3 (AT1G24190).; SIN3-like 1 (SNL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 2 (TAIR:AT5G15020.2). & (gnl|cdd|39405 : 142.0) no description available & (gnl|cdd|35161 : 100.0) no description available & (reliability: 372.0) & (original description: Putative SIN3, Description = Paired amphipathic helix repeat-containing protein, PFAM = PF02671)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf06291_359143-373457' '(at3g45630 : 368.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|37279 : 222.0) no description available & (gnl|cdd|34774 : 220.0) no description available & (reliability: 712.0) & (original description: Putative BnaC03g55430D, Description = BnaC03g55430D protein, PFAM = PF00076;PF14570)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf06361_131523-165348' '(at4g39680 : 219.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 10985 Blast hits to 6880 proteins in 693 species: Archae - 26; Bacteria - 1256; Metazoa - 3900; Fungi - 1267; Plants - 2321; Viruses - 541; Other Eukaryotes - 1674 (source: NCBI BLink). & (gnl|cdd|37627 : 121.0) no description available & (reliability: 438.0) & (original description: Putative At4g39680, Description = Apoptotic chromatin condensation inducer in the nucleus, PFAM = PF02037;PF16294)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf06361_323643-329080' '(at4g39680 : 182.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 10985 Blast hits to 6880 proteins in 693 species: Archae - 26; Bacteria - 1256; Metazoa - 3900; Fungi - 1267; Plants - 2321; Viruses - 541; Other Eukaryotes - 1674 (source: NCBI BLink). & (gnl|cdd|37627 : 107.0) no description available & (reliability: 364.0) & (original description: Putative At4g39680, Description = Apoptotic chromatin condensation inducer in the nucleus, PFAM = PF16294;PF02037)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf06369_296299-305587' '(at1g63470 : 161.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT1G63480.1); Has 999 Blast hits to 995 proteins in 66 species: Archae - 0; Bacteria - 22; Metazoa - 171; Fungi - 26; Plants - 768; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|86345 : 119.0) no description available & (reliability: 322.0) & (original description: Putative AHL5, Description = AT-hook motif nuclear-localized protein 5, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf06369_553534-563867' '(at4g11560 : 505.0) bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Transcription elongation factor S-II, central domain (InterPro:IPR003618); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT2G25120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37097 : 268.0) no description available & (gnl|cdd|72853 : 222.0) no description available & (reliability: 1010.0) & (original description: Putative At4g11560, Description = Bromo-adjacent homology (BAH) domain-containing protein, PFAM = PF01426;PF07500)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf06590_76568-82801' '(at3g45630 : 265.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|34774 : 133.0) no description available & (gnl|cdd|37279 : 131.0) no description available & (reliability: 526.0) & (original description: Putative BnaC03g55430D, Description = BnaC03g55430D protein, PFAM = PF14570)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf06822_180948-188829' '(at2g33620 : 180.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 148.0) no description available & (reliability: 360.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf06977_145703-167026' '(at5g61150 : 339.0) Encodes highly hydrophilic protein involved in positively regulating FLC expression. Mutants are early flowering and show a loss of FLC expression in the absence of cold.; VERNALIZATION INDEPENDENCE 4 (VIP4); INVOLVED IN: negative regulation of flower development, vernalization response; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leo1-like protein (InterPro:IPR007149); Has 69096 Blast hits to 31991 proteins in 1682 species: Archae - 184; Bacteria - 8816; Metazoa - 27909; Fungi - 8257; Plants - 3470; Viruses - 882; Other Eukaryotes - 19578 (source: NCBI BLink). & (gnl|cdd|67613 : 165.0) no description available & (gnl|cdd|37639 : 140.0) no description available & (reliability: 678.0) & (original description: Putative VIP4, Description = Protein LEO1 homolog, PFAM = PF04004)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf07027_391225-398112' '(at2g33620 : 126.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 111.0) no description available & (reliability: 252.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf07048_134689-143549' '(at1g54390 : 337.0) ING2 encodes a member of the Inhibitor of Growth family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; INHIBITOR OF GROWTH 2 (ING2); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT3G24010.1); Has 1316 Blast hits to 1312 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 731; Fungi - 422; Plants - 94; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|37184 : 118.0) no description available & (gnl|cdd|34639 : 95.5) no description available & (reliability: 674.0) & (original description: Putative ING2, Description = PHD finger protein ING2, PFAM = PF00628;PF12998)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf07163_25063-39641' '(at1g50620 : 268.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT3G20280.1); Has 3714 Blast hits to 3101 proteins in 414 species: Archae - 4; Bacteria - 443; Metazoa - 1736; Fungi - 538; Plants - 319; Viruses - 13; Other Eukaryotes - 661 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative At3g20280, Description = Putative ovule protein, PFAM = PF01426;PF00628)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf07327_173069-212270' '(at2g46040 : 238.0) ARID/BRIGHT DNA-binding domain;ELM2 domain protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: sperm cell, male gametophyte, cultured cell, seed, pollen tube; EXPRESSED DURING: M germinated pollen stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ELM2 (InterPro:IPR000949), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain;ELM2 domain protein (TAIR:AT4G11400.1); Has 198 Blast hits to 184 proteins in 31 species: Archae - 0; Bacteria - 1; Metazoa - 35; Fungi - 2; Plants - 156; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 476.0) & (original description: Putative ARID1, Description = AT-rich interactive domain-containing protein 1, PFAM = PF01388)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf07522_31035-38694' '(at1g67370 : 604.0) meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal.; ASYNAPTIC 1 (ASY1); CONTAINS InterPro DOMAIN/s: SWIRM (InterPro:IPR007526), DNA-binding HORMA (InterPro:IPR003511); BEST Arabidopsis thaliana protein match is: DNA-binding HORMA family protein (TAIR:AT4G32200.1); Has 527 Blast hits to 490 proteins in 159 species: Archae - 0; Bacteria - 18; Metazoa - 158; Fungi - 114; Plants - 58; Viruses - 21; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|39851 : 183.0) no description available & (gnl|cdd|85949 : 144.0) no description available & (reliability: 1208.0) & (original description: Putative ASY1, Description = Asynaptic 1, PFAM = PF02301)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf07672_30650-34297' '(o82797|pcna_tobac : 504.0) Proliferating cell nuclear antigen (PCNA) - Nicotiana tabacum (Common tobacco) & (at2g29570 : 470.0) Functionally interacts with POLH to repair DNA damaged by UVB damage.; proliferating cell nuclear antigen 2 (PCNA2); FUNCTIONS IN: DNA binding, DNA polymerase processivity factor activity; INVOLVED IN: regulation of DNA replication, error-prone translesion synthesis; LOCATED IN: PCNA complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cellular nuclear antigen 1 (TAIR:AT1G07370.1); Has 1860 Blast hits to 1848 proteins in 457 species: Archae - 391; Bacteria - 0; Metazoa - 314; Fungi - 169; Plants - 159; Viruses - 73; Other Eukaryotes - 754 (source: NCBI BLink). & (gnl|cdd|36849 : 403.0) no description available & (gnl|cdd|48351 : 266.0) no description available & (reliability: 940.0) & (original description: Putative pcn, Description = Proliferating cell nuclear antigen, PFAM = PF02747;PF00705)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf07741_450939-465580' '(at1g51540 : 598.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G27220.1); Has 1998 Blast hits to 1729 proteins in 252 species: Archae - 27; Bacteria - 371; Metazoa - 1276; Fungi - 25; Plants - 123; Viruses - 45; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|39642 : 101.0) no description available & (reliability: 1196.0) & (original description: Putative At3g27220, Description = Kelch repeat-containing protein At3g27220, PFAM = PF01344;PF13418;PF13964)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf07751_7083-12045' '(at5g49700 : 184.0) Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT1G14490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86345 : 111.0) no description available & (reliability: 368.0) & (original description: Putative AHL28, Description = AT-hook motif nuclear-localized protein 28, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf07766_22130-25446' '(at5g19490 : 149.0) Histone superfamily protein; FUNCTIONS IN: sequence-specific DNA binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C11 (TAIR:AT3G12480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36872 : 148.0) no description available & (reliability: 298.0) & (original description: Putative At5g19490, Description = Histone superfamily protein, PFAM = PF00808)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf07792_250550-271965' '(at5g60410 : 985.0) Encodes a plant small ubiquitin-like modifier (SUMO) E3 ligase that is a focal controller of Pi starvation-dependent responses. Also required for SA and PAD4-mediated R gene signalling, which in turn confers innate immunity in Arabidopsis. Also involved in the regulation of plant growth, drought responses and freezing tolerance. This latter effect is most likely due to SIZ1 dependent ABI5 sumoylation. Regulates leaf cell division and expansion through salicylic acid accumulation. signaling; SIZ1; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), Zinc finger, MIZ-type (InterPro:IPR004181), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37380 : 82.1) no description available & (reliability: 1970.0) & (original description: Putative SIZ1, Description = E3 SUMO-protein ligase SIZ1, PFAM = PF02891;PF00628;PF02037)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf07792_253035-326289' '(at5g60410 : 526.0) Encodes a plant small ubiquitin-like modifier (SUMO) E3 ligase that is a focal controller of Pi starvation-dependent responses. Also required for SA and PAD4-mediated R gene signalling, which in turn confers innate immunity in Arabidopsis. Also involved in the regulation of plant growth, drought responses and freezing tolerance. This latter effect is most likely due to SIZ1 dependent ABI5 sumoylation. Regulates leaf cell division and expansion through salicylic acid accumulation. signaling; SIZ1; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), Zinc finger, MIZ-type (InterPro:IPR004181), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1052.0) & (original description: Putative BnaA06g38840D, Description = BnaA06g38840D protein, PFAM = PF00628;PF02037)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf07926_750-6120' '(at4g39680 : 199.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 10985 Blast hits to 6880 proteins in 693 species: Archae - 26; Bacteria - 1256; Metazoa - 3900; Fungi - 1267; Plants - 2321; Viruses - 541; Other Eukaryotes - 1674 (source: NCBI BLink). & (gnl|cdd|37627 : 111.0) no description available & (reliability: 398.0) & (original description: Putative At4g39680, Description = Apoptotic chromatin condensation inducer in the nucleus, PFAM = PF02037;PF16294)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf08026_166531-173171' '(at2g33620 : 164.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 151.0) no description available & (reliability: 328.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf08531_119873-125752' '(at1g44770 : 268.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49710.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf08587_4230-9621' '(at2g45820 : 101.0) Remorin family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G61260.1); Has 2543 Blast hits to 1840 proteins in 340 species: Archae - 2; Bacteria - 408; Metazoa - 392; Fungi - 191; Plants - 500; Viruses - 4; Other Eukaryotes - 1046 (source: NCBI BLink). & (p93788|remo_soltu : 101.0) Remorin (pp34) - Solanum tuberosum (Potato) & (reliability: 202.0) & (original description: Putative rem-2, Description = Remorin 2, PFAM = PF03763;PF03766)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf08683_8141-16234' '(at1g67370 : 604.0) meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal.; ASYNAPTIC 1 (ASY1); CONTAINS InterPro DOMAIN/s: SWIRM (InterPro:IPR007526), DNA-binding HORMA (InterPro:IPR003511); BEST Arabidopsis thaliana protein match is: DNA-binding HORMA family protein (TAIR:AT4G32200.1); Has 527 Blast hits to 490 proteins in 159 species: Archae - 0; Bacteria - 18; Metazoa - 158; Fungi - 114; Plants - 58; Viruses - 21; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|39851 : 180.0) no description available & (gnl|cdd|85949 : 143.0) no description available & (reliability: 1208.0) & (original description: Putative ASY1, Description = Asynaptic 1, PFAM = PF02301)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf08683_9899-16346' '(at1g67370 : 442.0) meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal.; ASYNAPTIC 1 (ASY1); CONTAINS InterPro DOMAIN/s: SWIRM (InterPro:IPR007526), DNA-binding HORMA (InterPro:IPR003511); BEST Arabidopsis thaliana protein match is: DNA-binding HORMA family protein (TAIR:AT4G32200.1); Has 527 Blast hits to 490 proteins in 159 species: Archae - 0; Bacteria - 18; Metazoa - 158; Fungi - 114; Plants - 58; Viruses - 21; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|39851 : 182.0) no description available & (gnl|cdd|85949 : 138.0) no description available & (reliability: 884.0) & (original description: Putative ASY1, Description = Asynaptic 1, PFAM = PF02301)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf08711_44706-50950' '(at2g46040 : 209.0) ARID/BRIGHT DNA-binding domain;ELM2 domain protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: sperm cell, male gametophyte, cultured cell, seed, pollen tube; EXPRESSED DURING: M germinated pollen stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ELM2 (InterPro:IPR000949), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain;ELM2 domain protein (TAIR:AT4G11400.1); Has 198 Blast hits to 184 proteins in 31 species: Archae - 0; Bacteria - 1; Metazoa - 35; Fungi - 2; Plants - 156; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 418.0) & (original description: Putative PGSC0003DMG400021657, Description = Putative AT-rich interactive domain-containing protein 1-like, PFAM = PF01388)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf09109_95829-114232' '(at3g24870 : 926.0) Helicase/SANT-associated, DNA binding protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), HSA (InterPro:IPR006562), Homeodomain-like (InterPro:IPR009057), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Helicase/SANT-associated, DNA binding protein (TAIR:AT3G24880.1). & (reliability: 1852.0) & (original description: Putative BnaA07g05180D, Description = Putative chromatin modification-related protein EAF1-like, PFAM = PF13921;PF07529)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf09109_102005-104583' '(at3g24880 : 119.0) Helicase/SANT-associated, DNA binding protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), HSA (InterPro:IPR006562), Homeodomain-like (InterPro:IPR009057), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Helicase/SANT-associated, DNA binding protein (TAIR:AT3G24870.1); Has 17312 Blast hits to 12172 proteins in 594 species: Archae - 4; Bacteria - 677; Metazoa - 8001; Fungi - 2909; Plants - 1838; Viruses - 51; Other Eukaryotes - 3832 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative wg241, Description = E1A-binding protein p400, PFAM = )' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf09151_278870-286938' '(at2g20710 : 336.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G28020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 672.0) & (original description: Putative , Description = , PFAM = PF01535;PF01535;PF13812)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf09189_173621-176567' '(at2g45430 : 222.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 139.0) no description available & (reliability: 408.0) & (original description: Putative AHL22, Description = AT-hook motif nuclear-localized protein 22, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf09192_435996-442839' '(at3g24010 : 269.0) ING1 encodes a member of the Inhibitor of Growth family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; INHIBITOR OF GROWTH 1 (ING1); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: PHD finger protein-related (TAIR:AT1G54390.3); Has 1560 Blast hits to 1473 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 910; Fungi - 445; Plants - 120; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|37184 : 135.0) no description available & (gnl|cdd|34639 : 114.0) no description available & (reliability: 538.0) & (original description: Putative ING1, Description = PHD finger protein ING1, PFAM = PF12998)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf09416_126132-134771' '(at2g45850 : 100.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT3G61310.1); Has 793 Blast hits to 789 proteins in 47 species: Archae - 0; Bacteria - 4; Metazoa - 23; Fungi - 13; Plants - 747; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative , Description = , PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf09416_500585-503749' '(gnl|cdd|68508 : 122.0) no description available & (at3g17450 : 103.0) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative CHLREDRAFT_153519, Description = Predicted protein, PFAM = PF04937)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf09510_50261-63857' '(at4g12750 : 712.0) Homeodomain-like transcriptional regulator; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), DDT domain (InterPro:IPR004022), DDT domain, subgroup (InterPro:IPR018500), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G44180.1); Has 164 Blast hits to 146 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 152; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 1424.0) & (original description: Putative RLT3, Description = Homeobox-DDT domain protein RLT3, PFAM = PF02791;PF15613;PF15612)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf09530_156508-164891' '(gnl|cdd|37778 : 188.0) no description available & (at1g76010 : 173.0) Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein (InterPro:IPR002775); BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein (TAIR:AT1G20220.1); Has 82924 Blast hits to 30623 proteins in 1819 species: Archae - 80; Bacteria - 18988; Metazoa - 40987; Fungi - 4955; Plants - 6789; Viruses - 861; Other Eukaryotes - 10264 (source: NCBI BLink). & (gnl|cdd|85767 : 87.9) no description available & (reliability: 346.0) & (original description: Putative ALBA1, Description = DNA/RNA-binding protein Alba-like protein, PFAM = PF01918)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf09577_12973-25587' '(at5g15020 : 1217.0) Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190).; SIN3-like 2 (SNL2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 1 (TAIR:AT3G01320.1). & (gnl|cdd|39405 : 221.0) no description available & (gnl|cdd|35161 : 178.0) no description available & (reliability: 2434.0) & (original description: Putative SNL2, Description = Paired amphipathic helix protein Sin3-like 2, PFAM = PF02671;PF02671;PF02671;PF16879;PF08295)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf09644_28633-35099' '(at1g14410 : 301.0) Encodes a homolog of the potato p24 protein. Binds single strand telomeric repeats. Negatively regulates telomerase activity and telomere length.; WHIRLY 1 (WHY1); FUNCTIONS IN: DNA binding, telomeric DNA binding; INVOLVED IN: negative regulation of telomere maintenance via telomerase, defense response; LOCATED IN: plastid chromosome, chloroplast, nucleoid, telomerase holoenzyme complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Plant transcription factor (InterPro:IPR013742); BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT2G02740.2); Has 106 Blast hits to 105 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|71964 : 248.0) no description available & (reliability: 602.0) & (original description: Putative WHY2, Description = Single-stranded DNA-bindig protein WHY2, mitochondrial, PFAM = PF08536)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf09684_86300-89100' '(at2g42940 : 257.0) Predicted AT-hook DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT2G35270.1); Has 767 Blast hits to 762 proteins in 28 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 756; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|86345 : 140.0) no description available & (reliability: 514.0) & (original description: Putative AHL16, Description = AT-hook motif nuclear-localized protein 16, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf09698_207757-210702' '(at2g41870 : 115.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G57540.1); Has 469 Blast hits to 467 proteins in 36 species: Archae - 0; Bacteria - 7; Metazoa - 9; Fungi - 6; Plants - 437; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative At2g41870, Description = Remorin-like protein, PFAM = PF03763)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf10065_102027-106581' '(gnl|cdd|86345 : 121.0) no description available & (at2g33620 : 112.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf10224_247304-256907' '(at5g22760 : 608.0) PHD finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain (InterPro:IPR004022), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Zinc finger, PHD-type (InterPro:IPR001965), DDT domain superfamily (InterPro:IPR018501), DDT domain, subgroup (InterPro:IPR018500), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: metalloendopeptidases;zinc ion binding;DNA binding (TAIR:AT5G35210.2); Has 3640 Blast hits to 3265 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 2369; Fungi - 398; Plants - 598; Viruses - 0; Other Eukaryotes - 275 (source: NCBI BLink). & (gnl|cdd|36686 : 351.0) no description available & (reliability: 1216.0) & (original description: Putative At5g22760, Description = Nucleosome-remodeling factor subunit BPTF, PFAM = PF15612;PF00628;PF02791)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf10396_105713-119256' '(at5g47430 : 534.0) DWNN domain, a CCHC-type zinc finger; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DWNN domain (InterPro:IPR014891); BEST Arabidopsis thaliana protein match is: DWNN domain, a CCHC-type zinc finger (TAIR:AT4G17410.1). & (gnl|cdd|35535 : 212.0) no description available & (gnl|cdd|34819 : 141.0) no description available & (reliability: 1068.0) & (original description: Putative dl4735w, Description = Putative uncharacterized protein AT4g17400, PFAM = PF08783;PF13696)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf10465_422882-438227' '(at4g02560 : 453.0) Encodes a nuclear localized protein with similarity to transcriptional regulators. Recessive mutants are late flowering. Expression of LFY is reduced in LD mutants.; luminidependens (LD); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287). & (reliability: 906.0) & (original description: Putative LD, Description = Luminidependens, PFAM = )' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf10920_238101-242034' '(at3g58470 : 194.0) nucleic acid binding;methyltransferases; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, eukaryotic (InterPro:IPR019369), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052); Has 287 Blast hits to 287 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 79; Plants - 48; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|38560 : 138.0) no description available & (reliability: 388.0) & (original description: Putative XPO4, Description = N(6)-adenine-specific DNA methyltransferase 2, PFAM = PF10237)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf10974_71456-78366' '(at4g25320 : 175.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT5G51590.1); Has 750 Blast hits to 746 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 748; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86345 : 144.0) no description available & (reliability: 350.0) & (original description: Putative AHL2, Description = AT-hook motif nuclear-localized protein 2, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf11108_56089-64983' '(at5g12080 : 637.0) mechanosensitive channel of small conductance-like 10 (MSL10); FUNCTIONS IN: mechanically-gated ion channel activity; INVOLVED IN: detection of mechanical stimulus; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Membrane protein, At2g17000, predicted (InterPro:IPR016688), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920), Mechanosensitive ion channel MscS (InterPro:IPR006685); BEST Arabidopsis thaliana protein match is: mechanosensitive channel of small conductance-like 9 (TAIR:AT5G19520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39829 : 562.0) no description available & (gnl|cdd|64773 : 89.5) no description available & (reliability: 1154.0) & (original description: Putative MSL10, Description = Mechanosensitive ion channel protein 10, PFAM = PF00924)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf11439_42245-47420' '(at4g39680 : 289.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 10985 Blast hits to 6880 proteins in 693 species: Archae - 26; Bacteria - 1256; Metazoa - 3900; Fungi - 1267; Plants - 2321; Viruses - 541; Other Eukaryotes - 1674 (source: NCBI BLink). & (gnl|cdd|37627 : 132.0) no description available & (reliability: 578.0) & (original description: Putative At4g39680, Description = Putative uncharacterized protein AT4g39680, PFAM = PF16294;PF02037)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf11484_141753-149125' '(gnl|cdd|37778 : 186.0) no description available & (at1g76010 : 175.0) Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein (InterPro:IPR002775); BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein (TAIR:AT1G20220.1); Has 82924 Blast hits to 30623 proteins in 1819 species: Archae - 80; Bacteria - 18988; Metazoa - 40987; Fungi - 4955; Plants - 6789; Viruses - 861; Other Eukaryotes - 10264 (source: NCBI BLink). & (gnl|cdd|85767 : 82.9) no description available & (reliability: 350.0) & (original description: Putative At1g20220, Description = DNA/RNA-binding protein Alba-like protein, PFAM = PF01918)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf11638_14711-17783' '(at5g49700 : 172.0) Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT1G14490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86345 : 120.0) no description available & (reliability: 344.0) & (original description: Putative AHL17, Description = AT-hook motif nuclear-localized protein 17, PFAM = PF03479)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf11657_200827-213505' '(at3g08020 : 680.0) PHD finger family protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD-type zinc finger family protein (TAIR:AT3G52100.1); Has 2616 Blast hits to 2466 proteins in 178 species: Archae - 0; Bacteria - 13; Metazoa - 2009; Fungi - 82; Plants - 239; Viruses - 0; Other Eukaryotes - 273 (source: NCBI BLink). & (gnl|cdd|39644 : 381.0) no description available & (reliability: 1360.0) & (original description: Putative BnaC01g39530D, Description = BnaC01g39530D protein, PFAM = )' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf11684_344479-380261' '(at2g26780 : 2112.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); Has 448 Blast hits to 380 proteins in 145 species: Archae - 0; Bacteria - 0; Metazoa - 160; Fungi - 190; Plants - 63; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|36133 : 1164.0) no description available & (reliability: 4224.0) & (original description: Putative ECM29, Description = Proteasome component ECM29, PFAM = PF13001)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf11715_426090-432965' '(at2g20710 : 335.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G28020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 670.0) & (original description: Putative At2g20710, Description = Pentatricopeptide repeat-containing protein At2g20710, mitochondrial, PFAM = PF13041;PF01535;PF01535;PF01535;PF01535)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf11738_6334-12079' '(at4g11400 : 234.0) ARID/BRIGHT DNA-binding domain;ELM2 domain protein; FUNCTIONS IN: DNA binding; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), ELM2 (InterPro:IPR000949), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain;ELM2 domain protein (TAIR:AT2G46040.1); Has 254 Blast hits to 233 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 84; Fungi - 4; Plants - 166; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative PGSC0003DMG401012197, Description = AT-rich interactive domain-containing protein 1, PFAM = PF01388)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf11756_126119-139339' '(at3g45630 : 689.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|37279 : 262.0) no description available & (gnl|cdd|34774 : 215.0) no description available & (reliability: 1354.0) & (original description: Putative CNOT4, Description = CNOT4, PFAM = PF14570;PF00076)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf12210_409542-465521' '(at1g23230 : 2160.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629). & (gnl|cdd|37094 : 1140.0) no description available & (reliability: 4320.0) & (original description: Putative MED23, Description = Mediator of RNA polymerase II transcription subunit 23, PFAM = PF11573)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf12210_448356-463614' '(at1g23230 : 930.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629). & (gnl|cdd|37094 : 415.0) no description available & (reliability: 1860.0) & (original description: Putative MED23, Description = Mediator of RNA polymerase II transcription subunit 23, PFAM = )' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf12289_78329-82115' '(at3g22220 : 264.0) hAT transposon superfamily; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68508 : 142.0) no description available & (reliability: 528.0) & (original description: Putative BnaA07g02460D, Description = BnaA07g02460D protein, PFAM = PF04937;PF02892)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf12339_213414-223356' '(at3g43240 : 968.0) ARID/BRIGHT DNA-binding domain-containing protein; FUNCTIONS IN: DNA binding, zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); Has 133 Blast hits to 125 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 21; Fungi - 9; Plants - 99; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 1936.0) & (original description: Putative ARID4, Description = AT-rich interactive domain-containing protein 4, PFAM = PF01388)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf12498_14012-18822' '(at1g66170 : 686.0) encodes a PHD-domain containing protein required for male meiosis. Gene is expressed in developing male meiocytes and protein is localized to the nucleus.; MALE MEIOCYTE DEATH 1 (MMD1); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: microsporogenesis, regulation of transcription, DNA-dependent, male meiosis; LOCATED IN: nucleus; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT2G01810.1); Has 932 Blast hits to 913 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 337; Fungi - 321; Plants - 250; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|37055 : 176.0) no description available & (reliability: 1372.0) & (original description: Putative MMD1, Description = PHD finger protein MALE MEIOCYTE DEATH 1, PFAM = PF00628)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf12540_52841-56577' '(at5g54930 : 109.0) AT hook motif-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: DNA binding (TAIR:AT4G21895.1); Has 42 Blast hits to 42 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative Ccrd_011274, Description = AT hook, DNA-binding motif-containing protein, PFAM = )' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf12589_187763-193709' '(at3g58470 : 262.0) nucleic acid binding;methyltransferases; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, eukaryotic (InterPro:IPR019369), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052); Has 287 Blast hits to 287 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 79; Plants - 48; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|38560 : 226.0) no description available & (reliability: 524.0) & (original description: Putative N6AMT2, Description = Protein-lysine N-methyltransferase N6AMT2, PFAM = PF10237)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf12967_7929-11901' '(at2g41870 : 155.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G57540.1); Has 469 Blast hits to 467 proteins in 36 species: Archae - 0; Bacteria - 7; Metazoa - 9; Fungi - 6; Plants - 437; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|67381 : 105.0) no description available & (reliability: 310.0) & (original description: Putative At2g41870, Description = Putative DNA binding protein, PFAM = PF03763)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf13762_319456-322324' '(at5g54930 : 89.7) AT hook motif-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: DNA binding (TAIR:AT4G21895.1); Has 42 Blast hits to 42 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf13833_135567-141850' '(at1g13790 : 367.0) XH/XS domain-containing protein; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379), Domain of unknown function, putative Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT3G48670.2); Has 49019 Blast hits to 30980 proteins in 1872 species: Archae - 565; Bacteria - 6337; Metazoa - 23607; Fungi - 3326; Plants - 1659; Viruses - 198; Other Eukaryotes - 13327 (source: NCBI BLink). & (gnl|cdd|67106 : 152.0) no description available & (reliability: 734.0) & (original description: Putative FDM4, Description = Factor of DNA methylation 4, PFAM = PF03468;PF03470;PF03469)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf13962_36877-44403' '(at4g18650 : 189.0) transcription factor-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14880.2); Has 523 Blast hits to 523 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 521; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative BnaA01g09490D, Description = BnaA01g09490D protein, PFAM = PF14144)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf13995_268075-272812' '(at1g10200 : 290.0) WLIM1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1); Has 4354 Blast hits to 2727 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 3462; Fungi - 43; Plants - 506; Viruses - 0; Other Eukaryotes - 343 (source: NCBI BLink). & (p29675|sf3_helan : 261.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 163.0) no description available & (reliability: 580.0) & (original description: Putative WLIN2A, Description = LIM domain-containing protein WLIM2a, PFAM = PF00412;PF00412)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf14523_42031-47491' '(at1g14410 : 304.0) Encodes a homolog of the potato p24 protein. Binds single strand telomeric repeats. Negatively regulates telomerase activity and telomere length.; WHIRLY 1 (WHY1); FUNCTIONS IN: DNA binding, telomeric DNA binding; INVOLVED IN: negative regulation of telomere maintenance via telomerase, defense response; LOCATED IN: plastid chromosome, chloroplast, nucleoid, telomerase holoenzyme complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Plant transcription factor (InterPro:IPR013742); BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT2G02740.2); Has 106 Blast hits to 105 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|71964 : 248.0) no description available & (reliability: 608.0) & (original description: Putative WHY1, Description = Single-stranded DNA-binding protein WHY1, chloroplastic, PFAM = PF08536)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf15568_121138-126652' '(at3g48940 : 105.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT5G23750.2); Has 1837 Blast hits to 1261 proteins in 238 species: Archae - 1; Bacteria - 261; Metazoa - 152; Fungi - 115; Plants - 477; Viruses - 0; Other Eukaryotes - 831 (source: NCBI BLink). & (p93788|remo_soltu : 102.0) Remorin (pp34) - Solanum tuberosum (Potato) & (reliability: 206.0) & (original description: Putative REM1, Description = Remorin 1, PFAM = PF03766;PF03763)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf17127_31534-46685' '(p93788|remo_soltu : 109.0) Remorin (pp34) - Solanum tuberosum (Potato) & (at3g48940 : 89.7) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT5G23750.2); Has 1837 Blast hits to 1261 proteins in 238 species: Archae - 1; Bacteria - 261; Metazoa - 152; Fungi - 115; Plants - 477; Viruses - 0; Other Eukaryotes - 831 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative DBP, Description = Remorin, PFAM = PF03763;PF03766)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf18306_91308-108282' '(at5g55600 : 436.0) agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: RNA binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395), Bromo adjacent homology (BAH) domain (InterPro:IPR001025); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT1G68580.2). & (gnl|cdd|72861 : 146.0) no description available & (reliability: 872.0) & (original description: Putative BnaA03g11300D, Description = BnaA03g11300D protein, PFAM = PF01426;PF05641)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf33214_34015-37430' '(at1g17880 : 171.0) basic transcription factor 3 (BTF3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: Nascent polypeptide-associated complex NAC (TAIR:AT1G73230.1); Has 841 Blast hits to 841 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 427; Fungi - 178; Plants - 145; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|37451 : 157.0) no description available & (reliability: 338.0) & (original description: Putative btf3, Description = Nascent polypeptide-associated complex subunit beta, PFAM = PF01849)' T '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'niben101scf33515_1838-7675' '(at3g05060 : 711.0) SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein; NOP56-like pre RNA processing ribonucleoprotein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOP5, N-terminal (InterPro:IPR012974), NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: NOP56-like pre RNA processing ribonucleoprotein (TAIR:AT5G27120.1); Has 39712 Blast hits to 18529 proteins in 1244 species: Archae - 275; Bacteria - 3520; Metazoa - 14574; Fungi - 4183; Plants - 1688; Viruses - 262; Other Eukaryotes - 15210 (source: NCBI BLink). & (gnl|cdd|37783 : 591.0) no description available & (gnl|cdd|31687 : 305.0) no description available & (reliability: 1410.0) & (original description: Putative NOP58, Description = Nucleolar protein 58, PFAM = PF01798;PF08156)' T '27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'nbv0.3scaffold13720_4610-23546' '(at3g63070 : 255.0) Tudor/PWWP/MBT domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II, large subunit, CTD (InterPro:IPR006569), PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT domain-containing protein (TAIR:AT2G48160.1); Has 1177 Blast hits to 1087 proteins in 165 species: Archae - 0; Bacteria - 37; Metazoa - 667; Fungi - 174; Plants - 161; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|47880 : 105.0) no description available & (reliability: 510.0) & (original description: Putative ART1, Description = ENHANCER OF AG-4 protein 2, PFAM = PF04818;PF00855)' T '27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'nbv0.3scaffold27279_2639-17830' '(at5g23150 : 350.0) Putative transcription factor. Member of the floral homeotic AGAMOUS pathway.Mutations in HUA enhance the phenotype of mild ag-4 allele. Single hua mutants are early flowering and have reduced levels of FLC mRNA. Other MADS box flowering time genes such as FLM and MAF2 also appear to be regulated by HUA2. HUA2 normally activates FLC expression and enhances AG function.; ENHANCER OF AG-4 2 (HUA2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT domain-containing protein (TAIR:AT5G08230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47880 : 112.0) no description available & (gnl|cdd|37115 : 86.0) no description available & (reliability: 700.0) & (original description: Putative ART1, Description = ENHANCER OF AG-4 protein 2, PFAM = PF00855;PF04818)' T '27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'nbv0.3scaffold38655_3038-7500' '(at5g40340 : 174.0) Tudor/PWWP/MBT superfamily protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT3G27860.1); Has 216308 Blast hits to 97367 proteins in 3295 species: Archae - 846; Bacteria - 24234; Metazoa - 92634; Fungi - 23658; Plants - 11662; Viruses - 1573; Other Eukaryotes - 61701 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative PGSC0003DMG400000489, Description = BnaA07g14930D protein, PFAM = PF00855)' T '27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'nbv0.5scaffold466_379484-386385' '(at5g02950 : 252.0) Tudor/PWWP/MBT superfamily protein; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT3G09670.2); Has 1812 Blast hits to 1531 proteins in 231 species: Archae - 0; Bacteria - 88; Metazoa - 662; Fungi - 158; Plants - 279; Viruses - 11; Other Eukaryotes - 614 (source: NCBI BLink). & (reliability: 504.0) & (original description: Putative KK1_024527, Description = Serine/threonine-protein kinase ATM, PFAM = PF00855)' T '27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'nbv0.5scaffold4396_31817-65999' '(at2g48150 : 272.0) Encodes glutathione peroxidase.; glutathione peroxidase 4 (GPX4); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress, N-terminal protein myristoylation; LOCATED IN: cytosol; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 5 (TAIR:AT3G63080.1); Has 7346 Blast hits to 7345 proteins in 1724 species: Archae - 2; Bacteria - 3554; Metazoa - 785; Fungi - 210; Plants - 383; Viruses - 8; Other Eukaryotes - 2404 (source: NCBI BLink). & (gnl|cdd|36864 : 259.0) no description available & (gnl|cdd|48492 : 246.0) no description available & (q9lef0|gpx4_mescr : 238.0) Probable phospholipid hydroperoxide glutathione peroxidase (EC 1.11.1.12) (PHGPx) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 514.0) & (original description: Putative GPX4, Description = Probable glutathione peroxidase 4, PFAM = PF00255;PF00855;PF04818)' T '27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'nbv0.5scaffold7747_24018-46799' '(at3g63070 : 254.0) Tudor/PWWP/MBT domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II, large subunit, CTD (InterPro:IPR006569), PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT domain-containing protein (TAIR:AT2G48160.1); Has 1177 Blast hits to 1087 proteins in 165 species: Archae - 0; Bacteria - 37; Metazoa - 667; Fungi - 174; Plants - 161; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|47880 : 103.0) no description available & (reliability: 508.0) & (original description: Putative ART1, Description = ENHANCER OF AG-4 protein 2, PFAM = PF00855;PF04818)' T '27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben044scf00003380ctg007_1834-6388' '(at5g40340 : 174.0) Tudor/PWWP/MBT superfamily protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT3G27860.1); Has 216308 Blast hits to 97367 proteins in 3295 species: Archae - 846; Bacteria - 24234; Metazoa - 92634; Fungi - 23658; Plants - 11662; Viruses - 1573; Other Eukaryotes - 61701 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative PGSC0003DMG400000489, Description = BnaA07g14930D protein, PFAM = PF00855)' T '27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben044scf00015892ctg000_9445-24946' '(at5g23150 : 351.0) Putative transcription factor. Member of the floral homeotic AGAMOUS pathway.Mutations in HUA enhance the phenotype of mild ag-4 allele. Single hua mutants are early flowering and have reduced levels of FLC mRNA. Other MADS box flowering time genes such as FLM and MAF2 also appear to be regulated by HUA2. HUA2 normally activates FLC expression and enhances AG function.; ENHANCER OF AG-4 2 (HUA2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT domain-containing protein (TAIR:AT5G08230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47880 : 113.0) no description available & (gnl|cdd|37115 : 86.0) no description available & (reliability: 702.0) & (original description: Putative ART1, Description = ENHANCER OF AG-4 protein 2, PFAM = PF00855;PF04818)' T '27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben044scf00022943ctg000_6821-10469' '(at5g23150 : 204.0) Putative transcription factor. Member of the floral homeotic AGAMOUS pathway.Mutations in HUA enhance the phenotype of mild ag-4 allele. Single hua mutants are early flowering and have reduced levels of FLC mRNA. Other MADS box flowering time genes such as FLM and MAF2 also appear to be regulated by HUA2. HUA2 normally activates FLC expression and enhances AG function.; ENHANCER OF AG-4 2 (HUA2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT domain-containing protein (TAIR:AT5G08230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative ART1, Description = ENHANCER OF AG-4 protein 2, PFAM = PF04818)' T '27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben044scf00051891ctg002_1850-6300' '(at3g27860 : 207.0) Tudor/PWWP/MBT superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT5G40340.1); Has 273 Blast hits to 255 proteins in 49 species: Archae - 0; Bacteria - 5; Metazoa - 65; Fungi - 14; Plants - 156; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative PGSC0003DMG400000489, Description = BnaA07g14930D protein, PFAM = PF00855)' T '27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben101scf00011_24739-108517' '(at2g48150 : 269.0) Encodes glutathione peroxidase.; glutathione peroxidase 4 (GPX4); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress, N-terminal protein myristoylation; LOCATED IN: cytosol; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 5 (TAIR:AT3G63080.1); Has 7346 Blast hits to 7345 proteins in 1724 species: Archae - 2; Bacteria - 3554; Metazoa - 785; Fungi - 210; Plants - 383; Viruses - 8; Other Eukaryotes - 2404 (source: NCBI BLink). & (gnl|cdd|36864 : 258.0) no description available & (gnl|cdd|48492 : 243.0) no description available & (q9lef0|gpx4_mescr : 234.0) Probable phospholipid hydroperoxide glutathione peroxidase (EC 1.11.1.12) (PHGPx) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 516.0) & (original description: Putative GPX4, Description = Probable glutathione peroxidase 4, PFAM = PF00255;PF00855;PF04818)' T '27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben101scf00206_62928-77022' '(at3g21295 : 340.0) Tudor/PWWP/MBT superfamily protein; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G51745.1); Has 561 Blast hits to 428 proteins in 108 species: Archae - 2; Bacteria - 226; Metazoa - 60; Fungi - 64; Plants - 94; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 680.0) & (original description: Putative At3g03140, Description = BnaC04g49890D protein, PFAM = PF00855)' T '27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben101scf00369_194946-203252' '(at5g27650 : 459.0) Tudor/PWWP/MBT superfamily protein; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT3G05430.1); Has 6717 Blast hits to 4764 proteins in 372 species: Archae - 18; Bacteria - 431; Metazoa - 2974; Fungi - 702; Plants - 445; Viruses - 136; Other Eukaryotes - 2011 (source: NCBI BLink). & (reliability: 918.0) & (original description: Putative , Description = , PFAM = PF00855)' T '27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben101scf01289_890495-897540' '(at5g02950 : 245.0) Tudor/PWWP/MBT superfamily protein; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT3G09670.2); Has 1812 Blast hits to 1531 proteins in 231 species: Archae - 0; Bacteria - 88; Metazoa - 662; Fungi - 158; Plants - 279; Viruses - 11; Other Eukaryotes - 614 (source: NCBI BLink). & (reliability: 490.0) & (original description: Putative At5g40340, Description = Serine/threonine-protein kinase ATM, PFAM = PF00855)' T '27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben101scf01722_456961-464084' '(at5g02950 : 250.0) Tudor/PWWP/MBT superfamily protein; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT3G09670.2); Has 1812 Blast hits to 1531 proteins in 231 species: Archae - 0; Bacteria - 88; Metazoa - 662; Fungi - 158; Plants - 279; Viruses - 11; Other Eukaryotes - 614 (source: NCBI BLink). & (reliability: 500.0) & (original description: Putative KK1_024527, Description = Serine/threonine-protein kinase ATM, PFAM = PF00855)' T '27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben101scf01764_60879-68485' '(at3g21295 : 343.0) Tudor/PWWP/MBT superfamily protein; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G51745.1); Has 561 Blast hits to 428 proteins in 108 species: Archae - 2; Bacteria - 226; Metazoa - 60; Fungi - 64; Plants - 94; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 686.0) & (original description: Putative At3g03140, Description = BnaC04g49890D protein, PFAM = PF00855)' T '27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben101scf03595_305913-326141' '(at5g23150 : 345.0) Putative transcription factor. Member of the floral homeotic AGAMOUS pathway.Mutations in HUA enhance the phenotype of mild ag-4 allele. Single hua mutants are early flowering and have reduced levels of FLC mRNA. Other MADS box flowering time genes such as FLM and MAF2 also appear to be regulated by HUA2. HUA2 normally activates FLC expression and enhances AG function.; ENHANCER OF AG-4 2 (HUA2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT domain-containing protein (TAIR:AT5G08230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47880 : 113.0) no description available & (gnl|cdd|37115 : 93.7) no description available & (reliability: 690.0) & (original description: Putative HULK2, Description = HUA2-like protein 2, PFAM = PF00855;PF04818)' T '27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben101scf04567_377689-381326' '(at5g23150 : 204.0) Putative transcription factor. Member of the floral homeotic AGAMOUS pathway.Mutations in HUA enhance the phenotype of mild ag-4 allele. Single hua mutants are early flowering and have reduced levels of FLC mRNA. Other MADS box flowering time genes such as FLM and MAF2 also appear to be regulated by HUA2. HUA2 normally activates FLC expression and enhances AG function.; ENHANCER OF AG-4 2 (HUA2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT domain-containing protein (TAIR:AT5G08230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative ART1, Description = ENHANCER OF AG-4 protein 2, PFAM = PF04818)' T '27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben101scf05901_253296-261555' '(at5g27650 : 288.0) Tudor/PWWP/MBT superfamily protein; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT3G05430.1); Has 6717 Blast hits to 4764 proteins in 372 species: Archae - 18; Bacteria - 431; Metazoa - 2974; Fungi - 702; Plants - 445; Viruses - 136; Other Eukaryotes - 2011 (source: NCBI BLink). & (reliability: 576.0) & (original description: Putative , Description = , PFAM = PF00855)' T '27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben101scf06349_241916-246378' '(at5g40340 : 174.0) Tudor/PWWP/MBT superfamily protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT3G27860.1); Has 216308 Blast hits to 97367 proteins in 3295 species: Archae - 846; Bacteria - 24234; Metazoa - 92634; Fungi - 23658; Plants - 11662; Viruses - 1573; Other Eukaryotes - 61701 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative PGSC0003DMG400000489, Description = BnaA07g14930D protein, PFAM = PF00855)' T '27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben101scf09242_214843-223808' '(at3g03140 : 184.0) Tudor/PWWP/MBT superfamily protein; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT3G21295.1); Has 426 Blast hits to 278 proteins in 85 species: Archae - 0; Bacteria - 14; Metazoa - 209; Fungi - 70; Plants - 86; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative At3g03140, Description = BnaC04g49890D protein, PFAM = PF00855)' T '27.3.68' 'RNA.regulation of transcription.PWWP domain protein' 'niben101scf11009_96241-100745' '(at5g02950 : 275.0) Tudor/PWWP/MBT superfamily protein; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT3G09670.2); Has 1812 Blast hits to 1531 proteins in 231 species: Archae - 0; Bacteria - 88; Metazoa - 662; Fungi - 158; Plants - 279; Viruses - 11; Other Eukaryotes - 614 (source: NCBI BLink). & (reliability: 550.0) & (original description: Putative , Description = Serine/threonine-protein kinase ATM, PFAM = PF00855)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.3scaffold2762_5673-9751' '(at2g22740 : 433.0) Encodes a SU(VAR)3-9 homolog, a methyltransferase involved in histone methylation. The protein was shown to bind to methylated cytosines of CG, CNG and CNN motifs but has a preference for the latter two. This is a member of a subfamily of SET proteins that shares a conserved SRA domain.; SU(VAR)3-9 homolog 6 (SUVH6); FUNCTIONS IN: methyl-CpNpG binding, methyltransferase activity, methyl-CpG binding, methyl-CpNpN binding; INVOLVED IN: histone methylation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 5 (TAIR:AT2G35160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 251.0) no description available & (gnl|cdd|47772 : 138.0) no description available & (reliability: 866.0) & (original description: Putative Sb07g019863, Description = Putative uncharacterized protein Sb07g019863, PFAM = PF00856;PF05033;PF02182)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.3scaffold8884_37225-44615' '(at1g77300 : 157.0) Encodes a protein with histone lysine N-methyltransferase activity required specifically for the trimethylation of H3-K4 in FLC chromatin (and not in H3-K36 dimethylation). Acts as an inhibitor of flowering specifically involved in the autonomous promotion pathway. EFS also regulates the expression of genes involved in carotenoid biosynthesis.Modification of histone methylation at the CRTISO locus reduces transcript levels 90%. The increased shoot branching seen in some EFS mutants is likely due to the carotenoid biosynthesis defect having an effect on stringolactones.Required for ovule, embryo sac, anther and pollen development.; EARLY FLOWERING IN SHORT DAYS (EFS); FUNCTIONS IN: histone methyltransferase activity (H3-K4 specific); INVOLVED IN: in 10 processes; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: SET domain group 26 (TAIR:AT1G76710.2); Has 6227 Blast hits to 6009 proteins in 532 species: Archae - 3; Bacteria - 662; Metazoa - 2557; Fungi - 556; Plants - 1120; Viruses - 3; Other Eukaryotes - 1326 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative EFS, Description = Histone-lysine N-methyltransferase ASHH2, putative, PFAM = )' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.3scaffold14632_1-3618' '(at1g05830 : 219.0) Encodes a homolog of trithorax, a histone-lysine N-methyltransferase. Paralog of ATX1. Unlike ATX1 which is involved in trimethylating of histone H3-mysine 4, ATX2 is involved in dimethylating of histone H3-lysine 4. ATX1 and ATX2 influence the expression of largely nonoverlapping gene sets. The expression pattern of ATX2 is also different from that of ATX1.; trithorax-like protein 2 (ATX2); FUNCTIONS IN: histone methyltransferase activity (H3-K4 specific), DNA binding; INVOLVED IN: histone H3-K4 methylation, regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: stigma, rosette leaf, male gametophyte, root; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), FY-rich, C-terminal (InterPro:IPR003889), Zinc finger, PHD-type (InterPro:IPR001965), FY-rich, N-terminal (InterPro:IPR003888), Post-SET domain (InterPro:IPR003616), FY-rich, C-terminal subgroup (InterPro:IPR018516), PWWP (InterPro:IPR000313), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), FY-rich, N-terminal subgroup (InterPro:IPR018518), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1); Has 7263 Blast hits to 7069 proteins in 482 species: Archae - 2; Bacteria - 419; Metazoa - 3302; Fungi - 848; Plants - 1335; Viruses - 0; Other Eukaryotes - 1357 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative ATX1, Description = Histone-lysine N-methyltransferase ATX1, PFAM = PF00855;PF05964)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.3scaffold22009_2160-15562' '(at5g42400 : 309.0) Encodes ATXR7 (ARABIDOPSIS TRITHORAX-RELATED7), required for histone H3-K4 methylation and for transcriptional activation of Flowering Locus C.; SET domain protein 25 (SDG25); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), GYF (InterPro:IPR003169); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1); Has 5838 Blast hits to 5683 proteins in 501 species: Archae - 3; Bacteria - 461; Metazoa - 2434; Fungi - 507; Plants - 1016; Viruses - 2; Other Eukaryotes - 1415 (source: NCBI BLink). & (gnl|cdd|36296 : 246.0) no description available & (gnl|cdd|85073 : 140.0) no description available & (q8s4p5|ez2_maize : 104.0) Polycomb protein EZ2 (Enhancer of zeste protein 2) - Zea mays (Maize) & (reliability: 618.0) & (original description: Putative setd1bb, Description = SET domain containing 1Bb, PFAM = PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.3scaffold31611_734-4845' '(at1g73100 : 556.0) Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain.; SU(VAR)3-9 homolog 3 (SUVH3); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 1 (TAIR:AT5G04940.2); Has 4599 Blast hits to 4427 proteins in 402 species: Archae - 0; Bacteria - 285; Metazoa - 2284; Fungi - 494; Plants - 1115; Viruses - 0; Other Eukaryotes - 421 (source: NCBI BLink). & (gnl|cdd|36298 : 240.0) no description available & (gnl|cdd|47772 : 213.0) no description available & (reliability: 1112.0) & (original description: Putative SUVH1, Description = Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, PFAM = PF00856;PF05033;PF02182)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.3scaffold38528_6134-13411' '(at3g04380 : 436.0) Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain.; SUVR4; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), WIYLD domain (InterPro:IPR018848), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: homolog of SU(var)3-9 1 (TAIR:AT1G04050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 186.0) no description available & (gnl|cdd|85073 : 110.0) no description available & (reliability: 872.0) & (original description: Putative sdg107, Description = Histone-lysine N-methyltransferase SUVR4, PFAM = PF05033;PF00856;PF10440)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.3scaffold42128_12962-18430' '(at5g09790 : 455.0) Encodes a SET-domain protein, a H3K27 monomethyltransferases required for chromatin structure and gene silencing. Regulates heterochromatic DNA replication. Contains a PCNA-binding domain. ATXR5 accumulates preferentially during the late G1 or S phase, suggesting that it plays a role in cell-cycle regulation or progression. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation.; ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 (ATXR5); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 (TAIR:AT5G24330.1); Has 4395 Blast hits to 4055 proteins in 218 species: Archae - 0; Bacteria - 10; Metazoa - 2832; Fungi - 365; Plants - 935; Viruses - 0; Other Eukaryotes - 253 (source: NCBI BLink). & (gnl|cdd|36299 : 152.0) no description available & (reliability: 910.0) & (original description: Putative ATXR5, Description = Probable Histone-lysine N-methyltransferase ATXR5, PFAM = PF00856;PF00628)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.3scaffold52982_9800-14124' '(at5g24330 : 446.0) Encodes a SET-domain protein, a H3K27 monomethyltransferases required for chromatin structure and gene silencing. Regulates heterochromatic DNA replication. Contains a PCNA-binding domain. ATXR6 accumulates preferentially during the late G1 or S phase, suggesting that it plays a role in cell-cycle regulation or progression.; ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 (ATXR6); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 (TAIR:AT5G09790.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36299 : 149.0) no description available & (gnl|cdd|85073 : 83.9) no description available & (reliability: 892.0) & (original description: Putative ATXR6, Description = Histone-lysine N-methyltransferase ATXR6, PFAM = PF00856;PF00628)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.3scaffold56966_930-9056' '(at1g76710 : 371.0) ASH1-RELATED PROTEIN 1 (ASHH1); FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, histone methylation; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (TAIR:AT1G77300.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39643 : 296.0) no description available & (gnl|cdd|85073 : 131.0) no description available & (q8s4p6|ez1_maize : 98.6) Polycomb protein EZ1 (Enhancer of zeste protein 1) - Zea mays (Maize) & (reliability: 742.0) & (original description: Putative VSET2, Description = Histone H3 methyltransferase, PFAM = PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.3scaffold58039_248-8162' '(at3g04380 : 419.0) Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain.; SUVR4; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), WIYLD domain (InterPro:IPR018848), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: homolog of SU(var)3-9 1 (TAIR:AT1G04050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 192.0) no description available & (gnl|cdd|85073 : 115.0) no description available & (reliability: 838.0) & (original description: Putative sdg107, Description = Histone-lysine N-methyltransferase SUVR4, PFAM = PF05033;PF00856;PF10440)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.3scaffold59010_850-10179' '(at2g17900 : 616.0) Homology Subgroup S-ET - Protein containing an interrupted SET domain.; SET domain group 37 (SDG37); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: histone-lysine N-methyltransferase ATXR2 (TAIR:AT3G21820.1); Has 2797 Blast hits to 2717 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 1313; Fungi - 588; Plants - 382; Viruses - 7; Other Eukaryotes - 507 (source: NCBI BLink). & (gnl|cdd|37295 : 133.0) no description available & (reliability: 1232.0) & (original description: Putative ASHR1, Description = Histone-lysine N-methyltransferase ASHR1, PFAM = PF00856;PF01753)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.3scaffold64468_641-5934' '(at4g13460 : 766.0) Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation.; SU(VAR)3-9 homolog 9 (SUVH9); FUNCTIONS IN: zinc ion binding, histone-lysine N-methyltransferase activity; INVOLVED IN: DNA mediated transformation; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 2 (TAIR:AT2G33290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 230.0) no description available & (gnl|cdd|47772 : 230.0) no description available & (reliability: 1532.0) & (original description: Putative BnaA04g19330D, Description = BnaA04g19330D protein, PFAM = PF05033;PF02182;PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.5scaffold30_651358-664889' '(at4g15180 : 2077.0) SET domain protein 2 (SDG2); EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (TAIR:AT1G77300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36296 : 122.0) no description available & (gnl|cdd|47645 : 89.3) no description available & (reliability: 4154.0) & (original description: Putative SDG2, Description = Histone-lysine N-methyltransferase, PFAM = PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.5scaffold491_377352-382228' '(at2g18850 : 125.0) SET domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1). & (reliability: 250.0) & (original description: Putative glysoja_005790, Description = [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase, putative, PFAM = )' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.5scaffold516_149295-156966' '(at3g04380 : 403.0) Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain.; SUVR4; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), WIYLD domain (InterPro:IPR018848), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: homolog of SU(var)3-9 1 (TAIR:AT1G04050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 190.0) no description available & (gnl|cdd|85073 : 114.0) no description available & (reliability: 806.0) & (original description: Putative sdg107, Description = Histone-lysine N-methyltransferase SUVR4, PFAM = PF10440;PF05033;PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.5scaffold659_100805-116404' '(at2g44150 : 150.0) histone-lysine N-methyltransferase ASHH3 (ASHH3); FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: histone-lysine N-methyltransferase ASHH4 (TAIR:AT3G59960.1); Has 5334 Blast hits to 5316 proteins in 470 species: Archae - 2; Bacteria - 417; Metazoa - 2223; Fungi - 539; Plants - 1028; Viruses - 0; Other Eukaryotes - 1125 (source: NCBI BLink). & (gnl|cdd|39643 : 85.5) no description available & (reliability: 300.0) & (original description: Putative Os09g0307800, Description = Os09g0307800 protein, PFAM = )' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.5scaffold1188_340385-361035' '(at1g77300 : 452.0) Encodes a protein with histone lysine N-methyltransferase activity required specifically for the trimethylation of H3-K4 in FLC chromatin (and not in H3-K36 dimethylation). Acts as an inhibitor of flowering specifically involved in the autonomous promotion pathway. EFS also regulates the expression of genes involved in carotenoid biosynthesis.Modification of histone methylation at the CRTISO locus reduces transcript levels 90%. The increased shoot branching seen in some EFS mutants is likely due to the carotenoid biosynthesis defect having an effect on stringolactones.Required for ovule, embryo sac, anther and pollen development.; EARLY FLOWERING IN SHORT DAYS (EFS); FUNCTIONS IN: histone methyltransferase activity (H3-K4 specific); INVOLVED IN: in 10 processes; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: SET domain group 26 (TAIR:AT1G76710.2); Has 6227 Blast hits to 6009 proteins in 532 species: Archae - 3; Bacteria - 662; Metazoa - 2557; Fungi - 556; Plants - 1120; Viruses - 3; Other Eukaryotes - 1326 (source: NCBI BLink). & (gnl|cdd|39643 : 251.0) no description available & (gnl|cdd|47645 : 136.0) no description available & (reliability: 904.0) & (original description: Putative setd2, Description = Histone-lysine N-methyltransferase SETD2, PFAM = PF07496;PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.5scaffold1828_294454-300759' '(at5g17240 : 421.0) SET domain group 40 (SDG40); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain-containing protein (TAIR:AT3G55080.1); Has 770 Blast hits to 763 proteins in 162 species: Archae - 0; Bacteria - 0; Metazoa - 214; Fungi - 160; Plants - 288; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (gnl|cdd|36551 : 100.0) no description available & (reliability: 842.0) & (original description: Putative SDG40, Description = Os07g0471100 protein, PFAM = PF09273;PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'nbv0.5scaffold5475_5451-10484' '(at4g13460 : 771.0) Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation.; SU(VAR)3-9 homolog 9 (SUVH9); FUNCTIONS IN: zinc ion binding, histone-lysine N-methyltransferase activity; INVOLVED IN: DNA mediated transformation; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 2 (TAIR:AT2G33290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47772 : 234.0) no description available & (gnl|cdd|36298 : 233.0) no description available & (reliability: 1542.0) & (original description: Putative SUVH9, Description = Histone-lysine N-methyltransferase family member SUVH9, PFAM = PF05033;PF02182;PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00001510ctg004_2759-14814' '(at5g53430 : 1008.0) Homology Subgroup III; Orthology Group 2 - A putative histone methyltransferase (predicted to methylate H3K4) related to the Drosophila trithorax group proteins TRX and TRR and the yeast gene SET1. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation.; SET domain group 29 (SDG29); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: DNA mediated transformation, regulation of transcription, DNA-dependent; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Post-SET domain (InterPro:IPR003616), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), PWWP (InterPro:IPR000313), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: SET domain protein 16 (TAIR:AT4G27910.1); Has 7010 Blast hits to 6787 proteins in 464 species: Archae - 2; Bacteria - 389; Metazoa - 3222; Fungi - 817; Plants - 1208; Viruses - 0; Other Eukaryotes - 1372 (source: NCBI BLink). & (gnl|cdd|36296 : 607.0) no description available & (gnl|cdd|34742 : 128.0) no description available & (q8s4p6|ez1_maize : 90.1) Polycomb protein EZ1 (Enhancer of zeste protein 1) - Zea mays (Maize) & (reliability: 2016.0) & (original description: Putative ATX3, Description = Histone-lysine N-methyltransferase ATX3, PFAM = PF00628;PF13831;PF00856;PF00855;PF13832)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00003200ctg002_23591-33133' '(at3g21820 : 525.0) histone-lysine N-methyltransferase ATXR2 (ATXR2); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain group 37 (TAIR:AT2G17900.1); Has 1293 Blast hits to 1280 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 376; Fungi - 353; Plants - 295; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink). & (reliability: 1050.0) & (original description: Putative ATXR2, Description = Histone-lysine N-methyltransferase ATXR2, PFAM = PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00006313ctg010_1-6993' '(at3g04380 : 409.0) Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain.; SUVR4; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), WIYLD domain (InterPro:IPR018848), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: homolog of SU(var)3-9 1 (TAIR:AT1G04050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 173.0) no description available & (gnl|cdd|85073 : 110.0) no description available & (reliability: 818.0) & (original description: Putative ehmt2, Description = Histone-lysine N-methyltransferase SUVR4, PFAM = PF00856;PF10440)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00007556ctg008_2407-9490' '(at2g44150 : 356.0) histone-lysine N-methyltransferase ASHH3 (ASHH3); FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: histone-lysine N-methyltransferase ASHH4 (TAIR:AT3G59960.1); Has 5334 Blast hits to 5316 proteins in 470 species: Archae - 2; Bacteria - 417; Metazoa - 2223; Fungi - 539; Plants - 1028; Viruses - 0; Other Eukaryotes - 1125 (source: NCBI BLink). & (gnl|cdd|39643 : 165.0) no description available & (gnl|cdd|47645 : 131.0) no description available & (reliability: 712.0) & (original description: Putative whsc1, Description = Histone-lysine N-methyltransferase ASHH3, PFAM = PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00008246ctg012_474-11179' '(at1g76710 : 499.0) ASH1-RELATED PROTEIN 1 (ASHH1); FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, histone methylation; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (TAIR:AT1G77300.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39643 : 283.0) no description available & (gnl|cdd|85073 : 134.0) no description available & (q8s4p6|ez1_maize : 95.5) Polycomb protein EZ1 (Enhancer of zeste protein 1) - Zea mays (Maize) & (reliability: 998.0) & (original description: Putative ASHH1, Description = Histone-lysine N-methyltransferase ASHH1, PFAM = PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00008825ctg016_13161-17604' '(at1g73100 : 546.0) Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain.; SU(VAR)3-9 homolog 3 (SUVH3); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 1 (TAIR:AT5G04940.2); Has 4599 Blast hits to 4427 proteins in 402 species: Archae - 0; Bacteria - 285; Metazoa - 2284; Fungi - 494; Plants - 1115; Viruses - 0; Other Eukaryotes - 421 (source: NCBI BLink). & (gnl|cdd|36298 : 245.0) no description available & (gnl|cdd|47772 : 196.0) no description available & (reliability: 1092.0) & (original description: Putative SUVH1, Description = Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, PFAM = PF05033;PF00856;PF02182)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00009319ctg009_4883-11749' '(at3g04380 : 431.0) Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain.; SUVR4; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), WIYLD domain (InterPro:IPR018848), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: homolog of SU(var)3-9 1 (TAIR:AT1G04050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 190.0) no description available & (gnl|cdd|85073 : 111.0) no description available & (reliability: 862.0) & (original description: Putative sdg107, Description = Histone-lysine N-methyltransferase SUVR4, PFAM = PF05033;PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00010084ctg001_1761-16478' '(at4g15180 : 2092.0) SET domain protein 2 (SDG2); EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (TAIR:AT1G77300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36296 : 122.0) no description available & (gnl|cdd|47645 : 89.3) no description available & (reliability: 4184.0) & (original description: Putative SDG2, Description = Histone-lysine N-methyltransferase, PFAM = PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00012208ctg003_1538-10686' '(at3g07670 : 716.0) Rubisco methyltransferase family protein; FUNCTIONS IN: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubisco methyltransferase (InterPro:IPR011192), SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT5G14260.2); Has 1290 Blast hits to 1288 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 264; Fungi - 357; Plants - 465; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink). & (gnl|cdd|36551 : 243.0) no description available & (p94026|rbcmt_tobac : 112.0) Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor (EC 2.1.1.127) ([Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase) (RuBisCO methyltransferase) (RuBisCO LSMT) (rbcMT) & (gnl|cdd|87855 : 88.4) no description available & (reliability: 1432.0) & (original description: Putative Sb04g029430, Description = Putative uncharacterized protein Sb04g029430, PFAM = PF00856;PF09273)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00012897ctg004_1070-7914' '(at2g44150 : 372.0) histone-lysine N-methyltransferase ASHH3 (ASHH3); FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: histone-lysine N-methyltransferase ASHH4 (TAIR:AT3G59960.1); Has 5334 Blast hits to 5316 proteins in 470 species: Archae - 2; Bacteria - 417; Metazoa - 2223; Fungi - 539; Plants - 1028; Viruses - 0; Other Eukaryotes - 1125 (source: NCBI BLink). & (gnl|cdd|39643 : 195.0) no description available & (gnl|cdd|47645 : 139.0) no description available & (reliability: 744.0) & (original description: Putative whsc1, Description = Histone-lysine N-methyltransferase ASHH3, PFAM = PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00018049ctg003_3245-6205' '(at2g19640 : 157.0) ASH1-related protein 2 (ASHR2); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain protein 38 (TAIR:AT5G06620.1); Has 1755 Blast hits to 1733 proteins in 213 species: Archae - 0; Bacteria - 0; Metazoa - 753; Fungi - 380; Plants - 323; Viruses - 3; Other Eukaryotes - 296 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative ASHR2, Description = Histone-lysine N-methyltransferase ASHR2, PFAM = )' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00020825ctg000_13445-16141' '(at5g13960 : 293.0) Encodes a histone 3 lysine 9 specific methyltransferase involved in the maintenance of DNA methylation. SUVH4/KYP is a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. In kyp mutants, there is a loss of CpNpG methylation. The protein was shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the latter two. There is also evidence that KYP/SUVH4 might be involved in the telomerase-independent process known as Alternative Lengthening of Telomeres.; SU(VAR)3-9 homolog 4 (SUVH4); FUNCTIONS IN: double-stranded methylated DNA binding, methyl-CpNpG binding, methyl-CpG binding, histone methyltransferase activity (H3-K9 specific), methyl-CpNpN binding; INVOLVED IN: maintenance of DNA methylation, histone methylation, peptidyl-lysine methylation, histone H3-K9 methylation; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 6 (TAIR:AT2G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36298 : 173.0) no description available & (gnl|cdd|47645 : 98.9) no description available & (reliability: 586.0) & (original description: Putative KYP, Description = Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4, PFAM = PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00022816ctg004_4825-10027' '(at3g04380 : 372.0) Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain.; SUVR4; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), WIYLD domain (InterPro:IPR018848), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: homolog of SU(var)3-9 1 (TAIR:AT1G04050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 139.0) no description available & (gnl|cdd|47645 : 106.0) no description available & (reliability: 744.0) & (original description: Putative sdg107, Description = Histone-lysine N-methyltransferase SUVR4, PFAM = PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00029200ctg008_7692-12844' '(at5g09790 : 458.0) Encodes a SET-domain protein, a H3K27 monomethyltransferases required for chromatin structure and gene silencing. Regulates heterochromatic DNA replication. Contains a PCNA-binding domain. ATXR5 accumulates preferentially during the late G1 or S phase, suggesting that it plays a role in cell-cycle regulation or progression. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation.; ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 (ATXR5); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 (TAIR:AT5G24330.1); Has 4395 Blast hits to 4055 proteins in 218 species: Archae - 0; Bacteria - 10; Metazoa - 2832; Fungi - 365; Plants - 935; Viruses - 0; Other Eukaryotes - 253 (source: NCBI BLink). & (gnl|cdd|36299 : 152.0) no description available & (reliability: 916.0) & (original description: Putative ATXR5, Description = Probable Histone-lysine N-methyltransferase ATXR5, PFAM = PF00628;PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben044scf00054363ctg002_1-5799' '(at1g77300 : 175.0) Encodes a protein with histone lysine N-methyltransferase activity required specifically for the trimethylation of H3-K4 in FLC chromatin (and not in H3-K36 dimethylation). Acts as an inhibitor of flowering specifically involved in the autonomous promotion pathway. EFS also regulates the expression of genes involved in carotenoid biosynthesis.Modification of histone methylation at the CRTISO locus reduces transcript levels 90%. The increased shoot branching seen in some EFS mutants is likely due to the carotenoid biosynthesis defect having an effect on stringolactones.Required for ovule, embryo sac, anther and pollen development.; EARLY FLOWERING IN SHORT DAYS (EFS); FUNCTIONS IN: histone methyltransferase activity (H3-K4 specific); INVOLVED IN: in 10 processes; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: SET domain group 26 (TAIR:AT1G76710.2); Has 6227 Blast hits to 6009 proteins in 532 species: Archae - 3; Bacteria - 662; Metazoa - 2557; Fungi - 556; Plants - 1120; Viruses - 3; Other Eukaryotes - 1326 (source: NCBI BLink). & (gnl|cdd|39643 : 116.0) no description available & (gnl|cdd|85073 : 88.6) no description available & (reliability: 350.0) & (original description: Putative setd2, Description = Histone-lysine N-methyltransferase SETD2, PFAM = PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf00163_1575648-1581581' '(at2g22740 : 472.0) Encodes a SU(VAR)3-9 homolog, a methyltransferase involved in histone methylation. The protein was shown to bind to methylated cytosines of CG, CNG and CNN motifs but has a preference for the latter two. This is a member of a subfamily of SET proteins that shares a conserved SRA domain.; SU(VAR)3-9 homolog 6 (SUVH6); FUNCTIONS IN: methyl-CpNpG binding, methyltransferase activity, methyl-CpG binding, methyl-CpNpN binding; INVOLVED IN: histone methylation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 5 (TAIR:AT2G35160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 240.0) no description available & (gnl|cdd|47772 : 154.0) no description available & (reliability: 944.0) & (original description: Putative Sb07g019863, Description = Putative uncharacterized protein Sb07g019863, PFAM = PF00856;PF05033;PF02182)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf00270_880059-896287' '(at1g05830 : 1172.0) Encodes a homolog of trithorax, a histone-lysine N-methyltransferase. Paralog of ATX1. Unlike ATX1 which is involved in trimethylating of histone H3-mysine 4, ATX2 is involved in dimethylating of histone H3-lysine 4. ATX1 and ATX2 influence the expression of largely nonoverlapping gene sets. The expression pattern of ATX2 is also different from that of ATX1.; trithorax-like protein 2 (ATX2); FUNCTIONS IN: histone methyltransferase activity (H3-K4 specific), DNA binding; INVOLVED IN: histone H3-K4 methylation, regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: stigma, rosette leaf, male gametophyte, root; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), FY-rich, C-terminal (InterPro:IPR003889), Zinc finger, PHD-type (InterPro:IPR001965), FY-rich, N-terminal (InterPro:IPR003888), Post-SET domain (InterPro:IPR003616), FY-rich, C-terminal subgroup (InterPro:IPR018516), PWWP (InterPro:IPR000313), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), FY-rich, N-terminal subgroup (InterPro:IPR018518), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1); Has 7263 Blast hits to 7069 proteins in 482 species: Archae - 2; Bacteria - 419; Metazoa - 3302; Fungi - 848; Plants - 1335; Viruses - 0; Other Eukaryotes - 1357 (source: NCBI BLink). & (gnl|cdd|36296 : 389.0) no description available & (gnl|cdd|34742 : 135.0) no description available & (q8s4p4|ez3_maize : 90.1) Polycomb protein EZ3 (Enhancer of zeste protein 3) - Zea mays (Maize) & (reliability: 2344.0) & (original description: Putative ATX2, Description = Histone-lysine N-methyltransferase ATX2, PFAM = PF05965;PF13831;PF05964;PF13832;PF00855;PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf00419_1124489-1144043' '(at2g44150 : 426.0) histone-lysine N-methyltransferase ASHH3 (ASHH3); FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: histone-lysine N-methyltransferase ASHH4 (TAIR:AT3G59960.1); Has 5334 Blast hits to 5316 proteins in 470 species: Archae - 2; Bacteria - 417; Metazoa - 2223; Fungi - 539; Plants - 1028; Viruses - 0; Other Eukaryotes - 1125 (source: NCBI BLink). & (gnl|cdd|39643 : 200.0) no description available & (gnl|cdd|47645 : 137.0) no description available & (reliability: 852.0) & (original description: Putative ASHH3, Description = Histone-lysine N-methyltransferase ASHH3, PFAM = PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf00849_88134-95348' '(at3g04380 : 402.0) Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain.; SUVR4; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), WIYLD domain (InterPro:IPR018848), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: homolog of SU(var)3-9 1 (TAIR:AT1G04050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 189.0) no description available & (gnl|cdd|85073 : 114.0) no description available & (reliability: 804.0) & (original description: Putative sdg107, Description = Histone-lysine N-methyltransferase SUVR4, PFAM = PF10440;PF00856;PF05033)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf01376_61183-76514' '(at1g05830 : 368.0) Encodes a homolog of trithorax, a histone-lysine N-methyltransferase. Paralog of ATX1. Unlike ATX1 which is involved in trimethylating of histone H3-mysine 4, ATX2 is involved in dimethylating of histone H3-lysine 4. ATX1 and ATX2 influence the expression of largely nonoverlapping gene sets. The expression pattern of ATX2 is also different from that of ATX1.; trithorax-like protein 2 (ATX2); FUNCTIONS IN: histone methyltransferase activity (H3-K4 specific), DNA binding; INVOLVED IN: histone H3-K4 methylation, regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: stigma, rosette leaf, male gametophyte, root; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), FY-rich, C-terminal (InterPro:IPR003889), Zinc finger, PHD-type (InterPro:IPR001965), FY-rich, N-terminal (InterPro:IPR003888), Post-SET domain (InterPro:IPR003616), FY-rich, C-terminal subgroup (InterPro:IPR018516), PWWP (InterPro:IPR000313), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), FY-rich, N-terminal subgroup (InterPro:IPR018518), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1); Has 7263 Blast hits to 7069 proteins in 482 species: Archae - 2; Bacteria - 419; Metazoa - 3302; Fungi - 848; Plants - 1335; Viruses - 0; Other Eukaryotes - 1357 (source: NCBI BLink). & (reliability: 736.0) & (original description: Putative ATX1, Description = Histone-lysine N-methyltransferase ATX2, PFAM = PF05964;PF00855)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf01798_374189-427156' '(at2g18850 : 546.0) SET domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1). & (q43088|rbcmt_pea : 82.0) Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor (EC 2.1.1.127) ([Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase) (RuBisCO methyltransferase) (RuBisCO LSMT) (rbcMT) - & (reliability: 1092.0) & (original description: Putative At2g18850, Description = At2g18850, PFAM = PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf01798_417156-422032' '(at2g18850 : 122.0) SET domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1). & (reliability: 244.0) & (original description: Putative glysoja_005790, Description = [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase, putative, PFAM = )' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf02043_445724-453464' '(at5g17240 : 461.0) SET domain group 40 (SDG40); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain-containing protein (TAIR:AT3G55080.1); Has 770 Blast hits to 763 proteins in 162 species: Archae - 0; Bacteria - 0; Metazoa - 214; Fungi - 160; Plants - 288; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (gnl|cdd|36551 : 104.0) no description available & (reliability: 922.0) & (original description: Putative SDG40, Description = Protein SET DOMAIN GROUP 40, PFAM = PF09273;PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf02043_445739-453508' '(at5g17240 : 460.0) SET domain group 40 (SDG40); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain-containing protein (TAIR:AT3G55080.1); Has 770 Blast hits to 763 proteins in 162 species: Archae - 0; Bacteria - 0; Metazoa - 214; Fungi - 160; Plants - 288; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (gnl|cdd|36551 : 103.0) no description available & (reliability: 920.0) & (original description: Putative SDG40, Description = Protein SET DOMAIN GROUP 40, PFAM = PF00856;PF09273)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf02072_1858-13223' '(at2g44150 : 145.0) histone-lysine N-methyltransferase ASHH3 (ASHH3); FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: histone-lysine N-methyltransferase ASHH4 (TAIR:AT3G59960.1); Has 5334 Blast hits to 5316 proteins in 470 species: Archae - 2; Bacteria - 417; Metazoa - 2223; Fungi - 539; Plants - 1028; Viruses - 0; Other Eukaryotes - 1125 (source: NCBI BLink). & (gnl|cdd|39643 : 85.5) no description available & (reliability: 290.0) & (original description: Putative Os09g0307800, Description = Os09g0307800 protein, PFAM = )' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf02283_108822-123269' '(at4g27910 : 1008.0) SET domain protein 16 (SDG16); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Post-SET domain (InterPro:IPR003616), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), PWWP (InterPro:IPR000313), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: SET domain group 29 (TAIR:AT5G53430.1); Has 6853 Blast hits to 6701 proteins in 480 species: Archae - 2; Bacteria - 423; Metazoa - 3089; Fungi - 828; Plants - 1148; Viruses - 0; Other Eukaryotes - 1363 (source: NCBI BLink). & (gnl|cdd|36296 : 620.0) no description available & (gnl|cdd|34742 : 127.0) no description available & (q8s4p6|ez1_maize : 86.3) Polycomb protein EZ1 (Enhancer of zeste protein 1) - Zea mays (Maize) & (reliability: 2016.0) & (original description: Putative ATX3, Description = Histone-lysine N-methyltransferase ATX3, PFAM = PF00628;PF00855;PF13832;PF13831;PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf02290_549409-562505' '(at4g27910 : 1236.0) SET domain protein 16 (SDG16); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Post-SET domain (InterPro:IPR003616), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), PWWP (InterPro:IPR000313), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: SET domain group 29 (TAIR:AT5G53430.1); Has 6853 Blast hits to 6701 proteins in 480 species: Archae - 2; Bacteria - 423; Metazoa - 3089; Fungi - 828; Plants - 1148; Viruses - 0; Other Eukaryotes - 1363 (source: NCBI BLink). & (gnl|cdd|36296 : 664.0) no description available & (gnl|cdd|34742 : 120.0) no description available & (q8s4p4|ez3_maize : 84.3) Polycomb protein EZ3 (Enhancer of zeste protein 3) - Zea mays (Maize) & (reliability: 2472.0) & (original description: Putative ATX4, Description = Histone-lysine N-methyltransferase ATX4, PFAM = PF13831;PF13832;PF00628;PF00856;PF00855)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf02450_367947-395148' '(at2g44150 : 429.0) histone-lysine N-methyltransferase ASHH3 (ASHH3); FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: histone-lysine N-methyltransferase ASHH4 (TAIR:AT3G59960.1); Has 5334 Blast hits to 5316 proteins in 470 species: Archae - 2; Bacteria - 417; Metazoa - 2223; Fungi - 539; Plants - 1028; Viruses - 0; Other Eukaryotes - 1125 (source: NCBI BLink). & (gnl|cdd|39643 : 186.0) no description available & (gnl|cdd|47645 : 132.0) no description available & (reliability: 858.0) & (original description: Putative ASHH3, Description = Histone-lysine N-methyltransferase ASHH3, PFAM = PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf02452_435139-445183' '(at1g77300 : 136.0) Encodes a protein with histone lysine N-methyltransferase activity required specifically for the trimethylation of H3-K4 in FLC chromatin (and not in H3-K36 dimethylation). Acts as an inhibitor of flowering specifically involved in the autonomous promotion pathway. EFS also regulates the expression of genes involved in carotenoid biosynthesis.Modification of histone methylation at the CRTISO locus reduces transcript levels 90%. The increased shoot branching seen in some EFS mutants is likely due to the carotenoid biosynthesis defect having an effect on stringolactones.Required for ovule, embryo sac, anther and pollen development.; EARLY FLOWERING IN SHORT DAYS (EFS); FUNCTIONS IN: histone methyltransferase activity (H3-K4 specific); INVOLVED IN: in 10 processes; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: SET domain group 26 (TAIR:AT1G76710.2); Has 6227 Blast hits to 6009 proteins in 532 species: Archae - 3; Bacteria - 662; Metazoa - 2557; Fungi - 556; Plants - 1120; Viruses - 3; Other Eukaryotes - 1326 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative EFS, Description = Histone-lysine N-methyltransferase ASHH2, PFAM = )' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf02597_378217-390663' '(at1g77300 : 358.0) Encodes a protein with histone lysine N-methyltransferase activity required specifically for the trimethylation of H3-K4 in FLC chromatin (and not in H3-K36 dimethylation). Acts as an inhibitor of flowering specifically involved in the autonomous promotion pathway. EFS also regulates the expression of genes involved in carotenoid biosynthesis.Modification of histone methylation at the CRTISO locus reduces transcript levels 90%. The increased shoot branching seen in some EFS mutants is likely due to the carotenoid biosynthesis defect having an effect on stringolactones.Required for ovule, embryo sac, anther and pollen development.; EARLY FLOWERING IN SHORT DAYS (EFS); FUNCTIONS IN: histone methyltransferase activity (H3-K4 specific); INVOLVED IN: in 10 processes; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: SET domain group 26 (TAIR:AT1G76710.2); Has 6227 Blast hits to 6009 proteins in 532 species: Archae - 3; Bacteria - 662; Metazoa - 2557; Fungi - 556; Plants - 1120; Viruses - 3; Other Eukaryotes - 1326 (source: NCBI BLink). & (gnl|cdd|39643 : 202.0) no description available & (gnl|cdd|85073 : 117.0) no description available & (reliability: 716.0) & (original description: Putative EFS, Description = Histone-lysine N-methyltransferase SETD2, PFAM = PF00856;PF07496)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf03001_2193-7034' '(at5g24330 : 451.0) Encodes a SET-domain protein, a H3K27 monomethyltransferases required for chromatin structure and gene silencing. Regulates heterochromatic DNA replication. Contains a PCNA-binding domain. ATXR6 accumulates preferentially during the late G1 or S phase, suggesting that it plays a role in cell-cycle regulation or progression.; ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 (ATXR6); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 (TAIR:AT5G09790.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36299 : 146.0) no description available & (gnl|cdd|85073 : 81.2) no description available & (reliability: 902.0) & (original description: Putative ATXR6, Description = Histone-lysine N-methyltransferase ATXR6, PFAM = PF00856;PF00628)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf03227_290873-301371' '(at3g03750 : 317.0) SET domain protein 20 (SDG20); FUNCTIONS IN: zinc ion binding, histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding (TAIR:AT2G23740.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 152.0) no description available & (gnl|cdd|47645 : 105.0) no description available & (reliability: 634.0) & (original description: Putative SUVR3, Description = Histone-lysine N-methyltransferase SUVR3, PFAM = PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf03445_156051-160036' '(at3g61740 : 643.0) ATX3; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Post-SET domain (InterPro:IPR003616), PWWP (InterPro:IPR000313), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), SAND domain (InterPro:IPR000770), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: SET domain group 29 (TAIR:AT5G53430.1); Has 7727 Blast hits to 7398 proteins in 492 species: Archae - 2; Bacteria - 431; Metazoa - 3516; Fungi - 841; Plants - 1504; Viruses - 0; Other Eukaryotes - 1433 (source: NCBI BLink). & (gnl|cdd|36296 : 414.0) no description available & (gnl|cdd|34742 : 127.0) no description available & (q8s4p4|ez3_maize : 84.3) Polycomb protein EZ3 (Enhancer of zeste protein 3) - Zea mays (Maize) & (reliability: 1286.0) & (original description: Putative At2g31630, Description = Putative SET-domain transcriptional regulator, PFAM = PF13832;PF13831;PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf03736_159881-174155' '(at4g30860 : 556.0) Encodes a member of the trxG protein family. Contains a SET domain which is known to be involved in modification of histone tails by methylation. Interacts physically with AMS, but the implications of this interaction are unknown.Overexpression results in plieotrophic developmental defects.; SET domain group 4 (SDG4); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Post-SET domain (InterPro:IPR003616), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: histone-lysine N-methyltransferase ASHH3 (TAIR:AT2G44150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39643 : 192.0) no description available & (gnl|cdd|47645 : 132.0) no description available & (q8s4p5|ez2_maize : 84.3) Polycomb protein EZ2 (Enhancer of zeste protein 2) - Zea mays (Maize) & (reliability: 1112.0) & (original description: Putative ASHR3, Description = Histone-lysine N-methyltransferase ASHR3, PFAM = PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf03766_343519-352050' '(at5g14260 : 763.0) Rubisco methyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36551 : 204.0) no description available & (gnl|cdd|87855 : 111.0) no description available & (reliability: 1526.0) & (original description: Putative Sb03g029140, Description = Putative uncharacterized protein Sb03g029140, PFAM = PF09273)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf03852_55268-60519' '(at2g35160 : 632.0) Encodes SU(var)3-9 homologue 5 (SUVH5). SUVH5 has histone methyltransferase (MTase) activity in vitro and contributes to the maintenance of H3 mK9 (methylation of histone H3 at Lys-9) and CMT3-mediated non-CG methylation in vivo. This is a member of a subfamily of SET proteins that shares a conserved SRA domain.; SU(VAR)3-9 homolog 5 (SUVH5); FUNCTIONS IN: histone methyltransferase activity; INVOLVED IN: maintenance of DNA methylation, histone methylation, regulation of gene expression, epigenetic, response to chitin, chromatin silencing by small RNA; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 6 (TAIR:AT2G22740.1); Has 5295 Blast hits to 5101 proteins in 461 species: Archae - 0; Bacteria - 388; Metazoa - 2414; Fungi - 548; Plants - 1120; Viruses - 0; Other Eukaryotes - 825 (source: NCBI BLink). & (gnl|cdd|36298 : 254.0) no description available & (gnl|cdd|65922 : 188.0) no description available & (reliability: 1264.0) & (original description: Putative Sb07g019863, Description = Putative uncharacterized protein Sb07g019863, PFAM = PF00856;PF02182;PF05033)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf04485_334796-348427' '(at3g04380 : 468.0) Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain.; SUVR4; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), WIYLD domain (InterPro:IPR018848), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: homolog of SU(var)3-9 1 (TAIR:AT1G04050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 186.0) no description available & (gnl|cdd|85073 : 110.0) no description available & (reliability: 936.0) & (original description: Putative ehmt2, Description = Histone-lysine N-methyltransferase SUVR4, PFAM = PF00856;PF05033;PF10440)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf04690_286357-300744' '(at4g15180 : 2100.0) SET domain protein 2 (SDG2); EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (TAIR:AT1G77300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36296 : 120.0) no description available & (gnl|cdd|47645 : 88.9) no description available & (reliability: 4200.0) & (original description: Putative SDG2, Description = Putative histone-lysine N-methyltransferase ATXR3, PFAM = PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf04727_716054-724984' '(at3g07670 : 719.0) Rubisco methyltransferase family protein; FUNCTIONS IN: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubisco methyltransferase (InterPro:IPR011192), SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT5G14260.2); Has 1290 Blast hits to 1288 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 264; Fungi - 357; Plants - 465; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink). & (gnl|cdd|36551 : 243.0) no description available & (p94026|rbcmt_tobac : 110.0) Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor (EC 2.1.1.127) ([Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase) (RuBisCO methyltransferase) (RuBisCO LSMT) (rbcMT) & (gnl|cdd|87855 : 86.5) no description available & (reliability: 1438.0) & (original description: Putative Sb04g029430, Description = Putative uncharacterized protein Sb04g029430, PFAM = PF09273;PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf05823_324017-328615' '(at5g43990 : 127.0) Encodes SUVR2, one of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain. Localized to the nucleolus, maybe involved in regulation of rRNA expression.; SUVR2; FUNCTIONS IN: zinc ion binding, histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleolus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), WIYLD domain (InterPro:IPR018848), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: homolog of SU(var)3-9 1 (TAIR:AT1G04050.1). & (reliability: 254.0) & (original description: Putative PGSC0003DMG400014693, Description = BnaC02g30730D protein, PFAM = PF10440)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf05929_120599-127876' '(at3g04380 : 435.0) Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain.; SUVR4; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), WIYLD domain (InterPro:IPR018848), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: homolog of SU(var)3-9 1 (TAIR:AT1G04050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 186.0) no description available & (gnl|cdd|85073 : 109.0) no description available & (reliability: 870.0) & (original description: Putative Sb04g026310, Description = Putative uncharacterized protein Sb04g026310, PFAM = PF00856;PF10440;PF05033)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf05929_756171-760295' '(at4g13460 : 773.0) Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation.; SU(VAR)3-9 homolog 9 (SUVH9); FUNCTIONS IN: zinc ion binding, histone-lysine N-methyltransferase activity; INVOLVED IN: DNA mediated transformation; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 2 (TAIR:AT2G33290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47772 : 234.0) no description available & (gnl|cdd|36298 : 232.0) no description available & (reliability: 1546.0) & (original description: Putative SUVH9, Description = Histone-lysine N-methyltransferase family member SUVH9, PFAM = PF00856;PF02182;PF05033)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf06094_750637-780538' '(at3g21820 : 605.0) histone-lysine N-methyltransferase ATXR2 (ATXR2); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain group 37 (TAIR:AT2G17900.1); Has 1293 Blast hits to 1280 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 376; Fungi - 353; Plants - 295; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink). & (reliability: 1210.0) & (original description: Putative ATXR2, Description = Histone-lysine N-methyltransferase ATXR2, PFAM = PF00856;PF01753)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf06187_145190-178233' '(at5g13960 : 709.0) Encodes a histone 3 lysine 9 specific methyltransferase involved in the maintenance of DNA methylation. SUVH4/KYP is a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. In kyp mutants, there is a loss of CpNpG methylation. The protein was shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the latter two. There is also evidence that KYP/SUVH4 might be involved in the telomerase-independent process known as Alternative Lengthening of Telomeres.; SU(VAR)3-9 homolog 4 (SUVH4); FUNCTIONS IN: double-stranded methylated DNA binding, methyl-CpNpG binding, methyl-CpG binding, histone methyltransferase activity (H3-K9 specific), methyl-CpNpN binding; INVOLVED IN: maintenance of DNA methylation, histone methylation, peptidyl-lysine methylation, histone H3-K9 methylation; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 6 (TAIR:AT2G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36298 : 227.0) no description available & (gnl|cdd|47772 : 172.0) no description available & (reliability: 1418.0) & (original description: Putative SUVH4, Description = Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4, PFAM = PF00856;PF05033;PF02182)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf06514_177446-191365' '(at4g15180 : 2078.0) SET domain protein 2 (SDG2); EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (TAIR:AT1G77300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36296 : 121.0) no description available & (gnl|cdd|47645 : 88.9) no description available & (reliability: 4156.0) & (original description: Putative SDG2, Description = Histone-lysine N-methyltransferase, PFAM = PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf06761_83346-97795' '(gnl|cdd|36296 : 163.0) no description available & (at3g61740 : 137.0) ATX3; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Post-SET domain (InterPro:IPR003616), PWWP (InterPro:IPR000313), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), SAND domain (InterPro:IPR000770), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: SET domain group 29 (TAIR:AT5G53430.1); Has 7727 Blast hits to 7398 proteins in 492 species: Archae - 2; Bacteria - 431; Metazoa - 3516; Fungi - 841; Plants - 1504; Viruses - 0; Other Eukaryotes - 1433 (source: NCBI BLink). & (gnl|cdd|47645 : 124.0) no description available & (reliability: 274.0) & (original description: Putative kmt2a, Description = Myeloid/lymphoid or mixed-lineage leukemia, PFAM = PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf06779_417572-420743' '(at2g19640 : 359.0) ASH1-related protein 2 (ASHR2); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain protein 38 (TAIR:AT5G06620.1); Has 1755 Blast hits to 1733 proteins in 213 species: Archae - 0; Bacteria - 0; Metazoa - 753; Fungi - 380; Plants - 323; Viruses - 3; Other Eukaryotes - 296 (source: NCBI BLink). & (reliability: 718.0) & (original description: Putative ASHR2, Description = Histone-lysine N-methyltransferase ASHR2, PFAM = PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf06795_17231-20616' '(at1g26761 : 449.0) Arabinanase/levansucrase/invertase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 898.0) & (original description: Putative Ccrd_001757, Description = Glycosyl hydrolase, five-bladed beta-propellor domain-containing protein, PFAM = )' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf07775_278827-309830' '(at1g77300 : 682.0) Encodes a protein with histone lysine N-methyltransferase activity required specifically for the trimethylation of H3-K4 in FLC chromatin (and not in H3-K36 dimethylation). Acts as an inhibitor of flowering specifically involved in the autonomous promotion pathway. EFS also regulates the expression of genes involved in carotenoid biosynthesis.Modification of histone methylation at the CRTISO locus reduces transcript levels 90%. The increased shoot branching seen in some EFS mutants is likely due to the carotenoid biosynthesis defect having an effect on stringolactones.Required for ovule, embryo sac, anther and pollen development.; EARLY FLOWERING IN SHORT DAYS (EFS); FUNCTIONS IN: histone methyltransferase activity (H3-K4 specific); INVOLVED IN: in 10 processes; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: SET domain group 26 (TAIR:AT1G76710.2); Has 6227 Blast hits to 6009 proteins in 532 species: Archae - 3; Bacteria - 662; Metazoa - 2557; Fungi - 556; Plants - 1120; Viruses - 3; Other Eukaryotes - 1326 (source: NCBI BLink). & (gnl|cdd|39643 : 256.0) no description available & (gnl|cdd|47645 : 133.0) no description available & (reliability: 1364.0) & (original description: Putative VSET2, Description = Histone H3 methyltransferase, PFAM = PF07496;PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf07937_408548-411918' '(at3g55080 : 416.0) SET domain-containing protein; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36552 : 183.0) no description available & (p94026|rbcmt_tobac : 85.5) Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor (EC 2.1.1.127) ([Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase) (RuBisCO methyltransferase) (RuBisCO LSMT) (rbcMT) & (reliability: 832.0) & (original description: Putative At3g55080, Description = At3g55080, PFAM = PF09273;PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf07937_409080-411408' '(at3g55080 : 243.0) SET domain-containing protein; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative At3g55080, Description = At3g55080, PFAM = )' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf10322_247525-251126' '(at1g26760 : 523.0) SET domain protein 35 (SDG35); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: SET domain group 37 (TAIR:AT2G17900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1046.0) & (original description: Putative , Description = , PFAM = PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf11408_168869-203410' '(at1g76710 : 351.0) ASH1-RELATED PROTEIN 1 (ASHH1); FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, histone methylation; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (TAIR:AT1G77300.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39643 : 282.0) no description available & (gnl|cdd|85073 : 130.0) no description available & (q8s4p6|ez1_maize : 92.0) Polycomb protein EZ1 (Enhancer of zeste protein 1) - Zea mays (Maize) & (reliability: 702.0) & (original description: Putative VSET2, Description = Histone H3 methyltransferase, PFAM = PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf11408_180988-201882' '(at1g76710 : 149.0) ASH1-RELATED PROTEIN 1 (ASHH1); FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, histone methylation; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (TAIR:AT1G77300.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39643 : 91.7) no description available & (reliability: 298.0) & (original description: Putative nsd1b, Description = Putative histone-lysine N-methyltransferase NSD2, PFAM = PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf12382_76536-80793' '(at1g73100 : 556.0) Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain.; SU(VAR)3-9 homolog 3 (SUVH3); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 1 (TAIR:AT5G04940.2); Has 4599 Blast hits to 4427 proteins in 402 species: Archae - 0; Bacteria - 285; Metazoa - 2284; Fungi - 494; Plants - 1115; Viruses - 0; Other Eukaryotes - 421 (source: NCBI BLink). & (gnl|cdd|36298 : 242.0) no description available & (gnl|cdd|47772 : 213.0) no description available & (reliability: 1112.0) & (original description: Putative SUVH1, Description = Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, PFAM = PF05033;PF00856;PF02182)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf14642_221656-229177' '(at5g09790 : 454.0) Encodes a SET-domain protein, a H3K27 monomethyltransferases required for chromatin structure and gene silencing. Regulates heterochromatic DNA replication. Contains a PCNA-binding domain. ATXR5 accumulates preferentially during the late G1 or S phase, suggesting that it plays a role in cell-cycle regulation or progression. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation.; ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 (ATXR5); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 (TAIR:AT5G24330.1); Has 4395 Blast hits to 4055 proteins in 218 species: Archae - 0; Bacteria - 10; Metazoa - 2832; Fungi - 365; Plants - 935; Viruses - 0; Other Eukaryotes - 253 (source: NCBI BLink). & (gnl|cdd|36299 : 154.0) no description available & (gnl|cdd|85073 : 81.2) no description available & (reliability: 908.0) & (original description: Putative ATXR5, Description = Probable Histone-lysine N-methyltransferase ATXR5, PFAM = PF00628;PF00856)' T '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'niben101scf32746_103075-115170' '(at3g04380 : 438.0) Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain.; SUVR4; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), WIYLD domain (InterPro:IPR018848), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: homolog of SU(var)3-9 1 (TAIR:AT1G04050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36298 : 193.0) no description available & (gnl|cdd|85073 : 115.0) no description available & (reliability: 876.0) & (original description: Putative SUV39, Description = Histone-lysine N-methyltransferase Su(Var)3-9, PFAM = PF10440;PF00856;PF05033)' T '27.3.70' 'RNA.regulation of transcription.Silencing Group' 'nbv0.3scaffold14550_31936-39703' '(at1g03150 : 336.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT5G13780.1); Has 2433 Blast hits to 2433 proteins in 772 species: Archae - 233; Bacteria - 716; Metazoa - 629; Fungi - 398; Plants - 148; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (gnl|cdd|38444 : 249.0) no description available & (gnl|cdd|30804 : 81.2) no description available & (reliability: 672.0) & (original description: Putative nat5, Description = N-acetyltransferase, PFAM = PF00583)' T '27.3.70' 'RNA.regulation of transcription.Silencing Group' 'niben101scf02245_317282-323703' '(at5g38110 : 270.0) This gene is predicted to encode a silencing group A protein. Plant lines expressing RNAi constructs directed against SGA1 have reduced levels of agrobacterium-mediated root transformation.; anti- silencing function 1b (ASF1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: DNA mediated transformation, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Histone chaperone, ASF1-like (InterPro:IPR006818); BEST Arabidopsis thaliana protein match is: ASF1 like histone chaperone (TAIR:AT1G66740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38475 : 248.0) no description available & (gnl|cdd|86716 : 244.0) no description available & (reliability: 540.0) & (original description: Putative ASF1B, Description = Histone chaperone ASF1B, PFAM = PF04729)' T '27.3.70' 'RNA.regulation of transcription.Silencing Group' 'niben101scf04024_265575-311277' '(at1g66740 : 269.0) Located on the SSL2 region of Arabidopsis thaliana, which is homeologous to the Brassica S locus for self incompatibility. Expressed in both vegetative and reproductive organs suggesting AtSP7 might not be involved in self incompatibility.; SGA2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chromatin assembly or disassembly, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone chaperone, ASF1-like (InterPro:IPR006818); BEST Arabidopsis thaliana protein match is: anti- silencing function 1b (TAIR:AT5G38110.1); Has 608 Blast hits to 608 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 247; Fungi - 167; Plants - 75; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (gnl|cdd|38475 : 246.0) no description available & (gnl|cdd|86716 : 240.0) no description available & (reliability: 538.0) & (original description: Putative ASF1A, Description = Probable histone chaperone ASF1A, PFAM = PF04729)' T '27.3.70' 'RNA.regulation of transcription.Silencing Group' 'niben101scf04570_232782-238688' '(at5g38110 : 268.0) This gene is predicted to encode a silencing group A protein. Plant lines expressing RNAi constructs directed against SGA1 have reduced levels of agrobacterium-mediated root transformation.; anti- silencing function 1b (ASF1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: DNA mediated transformation, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Histone chaperone, ASF1-like (InterPro:IPR006818); BEST Arabidopsis thaliana protein match is: ASF1 like histone chaperone (TAIR:AT1G66740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38475 : 238.0) no description available & (gnl|cdd|86716 : 237.0) no description available & (reliability: 536.0) & (original description: Putative ASF1B, Description = Histone chaperone ASF1B, PFAM = PF04729)' T '27.3.70' 'RNA.regulation of transcription.Silencing Group' 'niben101scf05896_46818-58043' '(at1g03150 : 338.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT5G13780.1); Has 2433 Blast hits to 2433 proteins in 772 species: Archae - 233; Bacteria - 716; Metazoa - 629; Fungi - 398; Plants - 148; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (gnl|cdd|38444 : 252.0) no description available & (gnl|cdd|30804 : 83.1) no description available & (reliability: 676.0) & (original description: Putative nat5, Description = N-acetyltransferase, PFAM = PF00583)' T '27.3.70' 'RNA.regulation of transcription.Silencing Group' 'niben101scf07002_21329-26363' '(at5g38110 : 265.0) This gene is predicted to encode a silencing group A protein. Plant lines expressing RNAi constructs directed against SGA1 have reduced levels of agrobacterium-mediated root transformation.; anti- silencing function 1b (ASF1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: DNA mediated transformation, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Histone chaperone, ASF1-like (InterPro:IPR006818); BEST Arabidopsis thaliana protein match is: ASF1 like histone chaperone (TAIR:AT1G66740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38475 : 235.0) no description available & (gnl|cdd|86716 : 231.0) no description available & (reliability: 530.0) & (original description: Putative ASF1A, Description = Probable histone chaperone ASF1A, PFAM = PF04729)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'nbv0.3scaffold806_87743-101602' '(at5g44560 : 221.0) VPS2.2; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting-associated protein 2.3 (TAIR:AT1G03950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38440 : 214.0) no description available & (gnl|cdd|86302 : 96.8) no description available & (reliability: 442.0) & (original description: Putative vps2B, Description = Charged multivesicular body protein, PFAM = PF03357)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'nbv0.3scaffold3461_4951-7999' '(at1g17730 : 266.0) Encodes an ESCRT-related protein: CHMP1A/AT1G73030; CHMP1B/AT1G17730. CHMP1A and B mediate multivesicular body sorting of auxin carriers and are required for plant development. ESCRT: Endosomal Sorting Complexes Required For Transport machinery; CHMP: Charged Multivesicular Body Protein/Chromatin Modifying Protein.; vacuolar protein sorting 46.1 (VPS46.1); CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT1G73030.1); Has 1319 Blast hits to 1319 proteins in 225 species: Archae - 2; Bacteria - 0; Metazoa - 503; Fungi - 283; Plants - 343; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). & (gnl|cdd|38442 : 221.0) no description available & (reliability: 532.0) & (original description: Putative CHMP1A, Description = ESCRT-related protein CHMP1A, PFAM = PF03357)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'nbv0.3scaffold9996_67571-76356' '(at5g09260 : 166.0) vacuolar protein sorting-associated protein 20.2 (VPS20.2); INVOLVED IN: vesicle-mediated transport, N-terminal protein myristoylation; LOCATED IN: ESCRT III complex, plasma membrane; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT5G63880.1); Has 1828 Blast hits to 1807 proteins in 295 species: Archae - 35; Bacteria - 99; Metazoa - 731; Fungi - 367; Plants - 251; Viruses - 5; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|38121 : 160.0) no description available & (reliability: 328.0) & (original description: Putative CHMP6, Description = Vacuolar sorting-associated-like protein, PFAM = PF03357)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'nbv0.3scaffold31856_19452-22733' '(at5g22950 : 108.0) VPS24.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT3G45000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38439 : 107.0) no description available & (reliability: 216.0) & (original description: Putative CHMP3, Description = Charged multivesicular body protein 3, PFAM = PF03357)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'nbv0.3scaffold39861_13467-19480' '(at4g29160 : 192.0) SNF7.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT2G19830.1); Has 1847 Blast hits to 1847 proteins in 245 species: Archae - 2; Bacteria - 29; Metazoa - 703; Fungi - 444; Plants - 428; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink). & (gnl|cdd|36869 : 177.0) no description available & (gnl|cdd|86302 : 109.0) no description available & (reliability: 384.0) & (original description: Putative SNF7, Description = Charged multivesicular body protein 4, PFAM = PF03357)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'nbv0.3scaffold41201_11913-17620' '(gnl|cdd|38121 : 184.0) no description available & (at5g09260 : 177.0) vacuolar protein sorting-associated protein 20.2 (VPS20.2); INVOLVED IN: vesicle-mediated transport, N-terminal protein myristoylation; LOCATED IN: ESCRT III complex, plasma membrane; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT5G63880.1); Has 1828 Blast hits to 1807 proteins in 295 species: Archae - 35; Bacteria - 99; Metazoa - 731; Fungi - 367; Plants - 251; Viruses - 5; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|86302 : 99.1) no description available & (reliability: 344.0) & (original description: Putative chmp6, Description = Charged multivesicular body protein 6, PFAM = PF03357)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'nbv0.3scaffold57618_102-9400' '(at5g22950 : 202.0) VPS24.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT3G45000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38439 : 202.0) no description available & (reliability: 404.0) & (original description: Putative CHMP3, Description = Charged multivesicular body protein 3, PFAM = PF03357)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'nbv0.5scaffold141_840325-850655' '(at5g09260 : 191.0) vacuolar protein sorting-associated protein 20.2 (VPS20.2); INVOLVED IN: vesicle-mediated transport, N-terminal protein myristoylation; LOCATED IN: ESCRT III complex, plasma membrane; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT5G63880.1); Has 1828 Blast hits to 1807 proteins in 295 species: Archae - 35; Bacteria - 99; Metazoa - 731; Fungi - 367; Plants - 251; Viruses - 5; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|38121 : 184.0) no description available & (gnl|cdd|86302 : 100.0) no description available & (reliability: 362.0) & (original description: Putative chmp6, Description = Charged multivesicular body protein 6, PFAM = PF03357)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'niben044scf00005140ctg007_19879-24927' '(at2g06530 : 249.0) VPS2.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting-associated protein 2.3 (TAIR:AT1G03950.1); Has 2524 Blast hits to 2516 proteins in 271 species: Archae - 17; Bacteria - 20; Metazoa - 1106; Fungi - 512; Plants - 555; Viruses - 5; Other Eukaryotes - 309 (source: NCBI BLink). & (gnl|cdd|38440 : 241.0) no description available & (gnl|cdd|86302 : 117.0) no description available & (reliability: 498.0) & (original description: Putative vps2, Description = Charged multivesicular body protein 2a, PFAM = PF03357)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'niben044scf00007335ctg017_1627-4179' '(at2g19830 : 171.0) SNF7.2; INVOLVED IN: vesicle-mediated transport; LOCATED IN: ESCRT III complex, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT4G29160.3); Has 1789 Blast hits to 1789 proteins in 248 species: Archae - 16; Bacteria - 15; Metazoa - 681; Fungi - 406; Plants - 433; Viruses - 0; Other Eukaryotes - 238 (source: NCBI BLink). & (gnl|cdd|36869 : 167.0) no description available & (gnl|cdd|86302 : 106.0) no description available & (reliability: 342.0) & (original description: Putative NP39, Description = Charged multivesicular body protein 4b, PFAM = PF03357)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'niben044scf00016695ctg000_1-5095' '(at5g04850 : 328.0) VPS60.2; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT3G10640.1). & (gnl|cdd|36868 : 228.0) no description available & (gnl|cdd|86302 : 119.0) no description available & (reliability: 656.0) & (original description: Putative CHMP5, Description = Charged multivesicular body protein 5, PFAM = PF03357)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'niben044scf00028440ctg000_2299-9389' '(at4g29160 : 188.0) SNF7.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT2G19830.1); Has 1847 Blast hits to 1847 proteins in 245 species: Archae - 2; Bacteria - 29; Metazoa - 703; Fungi - 444; Plants - 428; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink). & (gnl|cdd|36869 : 179.0) no description available & (gnl|cdd|86302 : 108.0) no description available & (reliability: 376.0) & (original description: Putative NP39, Description = Charged multivesicular body protein 4b, PFAM = PF03357)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf00206_147577-150185' '(at1g17730 : 274.0) Encodes an ESCRT-related protein: CHMP1A/AT1G73030; CHMP1B/AT1G17730. CHMP1A and B mediate multivesicular body sorting of auxin carriers and are required for plant development. ESCRT: Endosomal Sorting Complexes Required For Transport machinery; CHMP: Charged Multivesicular Body Protein/Chromatin Modifying Protein.; vacuolar protein sorting 46.1 (VPS46.1); CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT1G73030.1); Has 1319 Blast hits to 1319 proteins in 225 species: Archae - 2; Bacteria - 0; Metazoa - 503; Fungi - 283; Plants - 343; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). & (gnl|cdd|38442 : 230.0) no description available & (reliability: 548.0) & (original description: Putative CHMP1A, Description = ESCRT-related protein CHMP1A, PFAM = PF03357)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf00271_767265-777524' '(at5g44560 : 222.0) VPS2.2; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting-associated protein 2.3 (TAIR:AT1G03950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38440 : 213.0) no description available & (gnl|cdd|86302 : 96.1) no description available & (reliability: 444.0) & (original description: Putative SLP, Description = Charged multivesicular body protein, PFAM = PF03357)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf00525_557043-563177' '(at3g10640 : 324.0) VPS60.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT5G04850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36868 : 226.0) no description available & (gnl|cdd|86302 : 121.0) no description available & (reliability: 648.0) & (original description: Putative chmp5, Description = Charged multivesicular body protein 5, PFAM = PF03357)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf00841_52525-58037' '(gnl|cdd|38439 : 206.0) no description available & (at5g22950 : 204.0) VPS24.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT3G45000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86302 : 81.4) no description available & (reliability: 408.0) & (original description: Putative chmp3, Description = Charged multivesicular body protein 3, PFAM = PF03357)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf01146_501854-513930' '(at4g29160 : 198.0) SNF7.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT2G19830.1); Has 1847 Blast hits to 1847 proteins in 245 species: Archae - 2; Bacteria - 29; Metazoa - 703; Fungi - 444; Plants - 428; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink). & (gnl|cdd|36869 : 186.0) no description available & (gnl|cdd|86302 : 110.0) no description available & (reliability: 396.0) & (original description: Putative NP39, Description = Charged multivesicular body protein 4b, PFAM = PF03357)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf02790_490268-496450' '(at2g06530 : 251.0) VPS2.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting-associated protein 2.3 (TAIR:AT1G03950.1); Has 2524 Blast hits to 2516 proteins in 271 species: Archae - 17; Bacteria - 20; Metazoa - 1106; Fungi - 512; Plants - 555; Viruses - 5; Other Eukaryotes - 309 (source: NCBI BLink). & (gnl|cdd|38440 : 240.0) no description available & (gnl|cdd|86302 : 117.0) no description available & (reliability: 502.0) & (original description: Putative vps2, Description = Charged multivesicular body protein 2a, PFAM = PF03357)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf03138_215547-238417' '(at5g04850 : 327.0) VPS60.2; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT3G10640.1). & (gnl|cdd|36868 : 228.0) no description available & (gnl|cdd|86302 : 120.0) no description available & (reliability: 654.0) & (original description: Putative chmp5, Description = Charged multivesicular body protein 5, PFAM = PF03357)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf03351_381973-393049' '(at5g09260 : 195.0) vacuolar protein sorting-associated protein 20.2 (VPS20.2); INVOLVED IN: vesicle-mediated transport, N-terminal protein myristoylation; LOCATED IN: ESCRT III complex, plasma membrane; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT5G63880.1); Has 1828 Blast hits to 1807 proteins in 295 species: Archae - 35; Bacteria - 99; Metazoa - 731; Fungi - 367; Plants - 251; Viruses - 5; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|38121 : 185.0) no description available & (gnl|cdd|86302 : 99.5) no description available & (reliability: 384.0) & (original description: Putative chmp6, Description = Charged multivesicular body protein 6, PFAM = PF03357)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf04316_1137615-1144960' '(at4g29160 : 189.0) SNF7.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT2G19830.1); Has 1847 Blast hits to 1847 proteins in 245 species: Archae - 2; Bacteria - 29; Metazoa - 703; Fungi - 444; Plants - 428; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink). & (gnl|cdd|36869 : 177.0) no description available & (gnl|cdd|86302 : 108.0) no description available & (reliability: 378.0) & (original description: Putative NP39, Description = Charged multivesicular body protein 4b, PFAM = PF03357)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf04560_198803-213369' '(gnl|cdd|38439 : 206.0) no description available & (at5g22950 : 205.0) VPS24.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT3G45000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 410.0) & (original description: Putative chmp3, Description = Charged multivesicular body protein 3, PFAM = PF03357)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf04675_50034-58628' '(at4g29160 : 211.0) SNF7.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT2G19830.1); Has 1847 Blast hits to 1847 proteins in 245 species: Archae - 2; Bacteria - 29; Metazoa - 703; Fungi - 444; Plants - 428; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink). & (gnl|cdd|36869 : 178.0) no description available & (gnl|cdd|86302 : 110.0) no description available & (reliability: 422.0) & (original description: Putative BnaA07g00950D, Description = BnaA07g00950D protein, PFAM = PF03357)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf05272_122810-125822' '(at1g17730 : 266.0) Encodes an ESCRT-related protein: CHMP1A/AT1G73030; CHMP1B/AT1G17730. CHMP1A and B mediate multivesicular body sorting of auxin carriers and are required for plant development. ESCRT: Endosomal Sorting Complexes Required For Transport machinery; CHMP: Charged Multivesicular Body Protein/Chromatin Modifying Protein.; vacuolar protein sorting 46.1 (VPS46.1); CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT1G73030.1); Has 1319 Blast hits to 1319 proteins in 225 species: Archae - 2; Bacteria - 0; Metazoa - 503; Fungi - 283; Plants - 343; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). & (gnl|cdd|38442 : 221.0) no description available & (reliability: 532.0) & (original description: Putative CHMP1A, Description = ESCRT-related protein CHMP1A, PFAM = PF03357)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf09116_386185-388360' '(at1g03950 : 124.0) vacuolar protein sorting-associated protein 2.3 (VPS2.3); CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT5G44560.1); Has 1693 Blast hits to 1691 proteins in 237 species: Archae - 2; Bacteria - 12; Metazoa - 754; Fungi - 334; Plants - 366; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|38440 : 111.0) no description available & (reliability: 248.0) & (original description: Putative VPS2B, Description = Vacuolar sorting-associated protein 2-like protein, PFAM = PF03357)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf09116_388361-391487' '(at1g03950 : 96.7) vacuolar protein sorting-associated protein 2.3 (VPS2.3); CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT5G44560.1); Has 1693 Blast hits to 1691 proteins in 237 species: Archae - 2; Bacteria - 12; Metazoa - 754; Fungi - 334; Plants - 366; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|38440 : 92.0) no description available & (reliability: 193.4) & (original description: Putative At1g03950, Description = Vacuolar sorting-associated protein 2-like protein, PFAM = PF03357)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf09792_186346-194008' '(at1g03950 : 223.0) vacuolar protein sorting-associated protein 2.3 (VPS2.3); CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT5G44560.1); Has 1693 Blast hits to 1691 proteins in 237 species: Archae - 2; Bacteria - 12; Metazoa - 754; Fungi - 334; Plants - 366; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|38440 : 203.0) no description available & (gnl|cdd|86302 : 102.0) no description available & (reliability: 446.0) & (original description: Putative SLP, Description = Subunit of the ESCRT-III complex, PFAM = PF03357)' T '27.3.71' 'RNA.regulation of transcription.SNF7' 'niben101scf10542_71652-79673' '(at3g62080 : 287.0) SNF7 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); Has 1192 Blast hits to 1169 proteins in 233 species: Archae - 26; Bacteria - 65; Metazoa - 638; Fungi - 121; Plants - 165; Viruses - 1; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|38122 : 173.0) no description available & (reliability: 574.0) & (original description: Putative BnaC08g32010D, Description = BnaC08g32010D protein, PFAM = PF03357)' T '27.3.72' 'RNA.regulation of transcription.Transcriptional Adaptor Zinc Bundle (TAZ) domain family' 'nbv0.5scaffold299_618653-627053' '(at5g67480 : 369.0) BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves.; BTB and TAZ domain protein 4 (BT4); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: response to auxin stimulus, response to gibberellin stimulus; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 5 (TAIR:AT4G37610.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36989 : 213.0) no description available & (reliability: 738.0) & (original description: Putative BT4, Description = BTB/POZ and TAZ domain-containing protein 4, PFAM = PF00651;PF02135)' T '27.3.72' 'RNA.regulation of transcription.Transcriptional Adaptor Zinc Bundle (TAZ) domain family' 'niben044scf00053993ctg000_1123-6216' '(at1g05690 : 380.0) BTB and TAZ domain protein. Acts redunantly with BT1 and BT2 during female gametophyte development. Acts with BT2 during male gametophyte development.; BTB and TAZ domain protein 3 (BT3); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: embryo sac development, pollen development; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 4 (TAIR:AT5G67480.2); Has 1903 Blast hits to 1903 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 1048; Fungi - 0; Plants - 775; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|36989 : 233.0) no description available & (reliability: 730.0) & (original description: Putative BT3, Description = BTB/POZ and TAZ domain-containing protein 3, PFAM = PF02135;PF00651)' T '27.3.72' 'RNA.regulation of transcription.Transcriptional Adaptor Zinc Bundle (TAZ) domain family' 'niben101scf00168_1158580-1163542' '(at1g05690 : 380.0) BTB and TAZ domain protein. Acts redunantly with BT1 and BT2 during female gametophyte development. Acts with BT2 during male gametophyte development.; BTB and TAZ domain protein 3 (BT3); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: embryo sac development, pollen development; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 4 (TAIR:AT5G67480.2); Has 1903 Blast hits to 1903 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 1048; Fungi - 0; Plants - 775; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|36989 : 237.0) no description available & (reliability: 714.0) & (original description: Putative BT3, Description = BTB/POZ and TAZ domain-containing protein 3, PFAM = PF02135;PF00651)' T '27.3.72' 'RNA.regulation of transcription.Transcriptional Adaptor Zinc Bundle (TAZ) domain family' 'niben101scf00991_797862-801690' '(at5g67480 : 395.0) BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves.; BTB and TAZ domain protein 4 (BT4); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: response to auxin stimulus, response to gibberellin stimulus; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 5 (TAIR:AT4G37610.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36989 : 225.0) no description available & (reliability: 790.0) & (original description: Putative BT4, Description = BTB/POZ and TAZ domain-containing protein 4, PFAM = PF00651;PF02135)' T '27.3.72' 'RNA.regulation of transcription.Transcriptional Adaptor Zinc Bundle (TAZ) domain family' 'niben101scf13139_18494-32439' '(at5g67480 : 363.0) BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves.; BTB and TAZ domain protein 4 (BT4); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: response to auxin stimulus, response to gibberellin stimulus; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 5 (TAIR:AT4G37610.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36989 : 215.0) no description available & (reliability: 726.0) & (original description: Putative BT4, Description = BTB/POZ and TAZ domain-containing protein 4, PFAM = PF02135;PF00651)' T '27.3.72' 'RNA.regulation of transcription.Transcriptional Adaptor Zinc Bundle (TAZ) domain family' 'niben101scf16613_510682-514524' '(at5g67480 : 393.0) BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves.; BTB and TAZ domain protein 4 (BT4); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: response to auxin stimulus, response to gibberellin stimulus; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 5 (TAIR:AT4G37610.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36989 : 226.0) no description available & (reliability: 786.0) & (original description: Putative BT4, Description = BTB/POZ and TAZ domain-containing protein 4, PFAM = PF02135;PF00651)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'nbv0.3scaffold11003_908-4743' '(at3g43590 : 90.5) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT3G43490.1); Has 22952 Blast hits to 17782 proteins in 462 species: Archae - 2; Bacteria - 65; Metazoa - 3265; Fungi - 1419; Plants - 1360; Viruses - 15440; Other Eukaryotes - 1401 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative PGSC0003DMG400005910, Description = Zinc finger, CCHC-type, PFAM = PF00098)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'nbv0.3scaffold38669_13405-19604' '(at3g43590 : 250.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT3G43490.1); Has 22952 Blast hits to 17782 proteins in 462 species: Archae - 2; Bacteria - 65; Metazoa - 3265; Fungi - 1419; Plants - 1360; Viruses - 15440; Other Eukaryotes - 1401 (source: NCBI BLink). & (reliability: 500.0) & (original description: Putative BnaA06g20160D, Description = BnaA06g20160D protein, PFAM = PF00098;PF00098;PF00098)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'nbv0.5scaffold1049_304912-311556' '(at4g00980 : 83.6) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: transcriptional coactivator p15 (PC4) family protein (KELP) (TAIR:AT4G10920.2); Has 580 Blast hits to 578 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 36; Fungi - 5; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative , Description = , PFAM = PF14223)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'nbv0.5scaffold1052_21850-26514' '(at5g07350 : 286.0) RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.; TUDOR-SN protein 1 (Tudor1); CONTAINS InterPro DOMAIN/s: Staphylococcal nuclease (SNase-like) (InterPro:IPR006021), RNA-induced silencing complex, nuclease component Tudor-SN (InterPro:IPR016685), Staphylococcal nuclease (SNase-like), OB-fold (InterPro:IPR016071), Tudor subgroup (InterPro:IPR018351), Tudor domain (InterPro:IPR002999), Maternal tudor protein (InterPro:IPR008191); BEST Arabidopsis thaliana protein match is: TUDOR-SN protein 2 (TAIR:AT5G61780.1); Has 1297 Blast hits to 805 proteins in 208 species: Archae - 2; Bacteria - 27; Metazoa - 772; Fungi - 182; Plants - 145; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (gnl|cdd|37250 : 156.0) no description available & (gnl|cdd|84869 : 101.0) no description available & (reliability: 572.0) & (original description: Putative SN4TDR, Description = Nuclease domain-containing protein 1, PFAM = PF00567;PF00565)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'nbv0.5scaffold2198_179343-185008' '(at3g43590 : 93.2) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT3G43490.1); Has 22952 Blast hits to 17782 proteins in 462 species: Archae - 2; Bacteria - 65; Metazoa - 3265; Fungi - 1419; Plants - 1360; Viruses - 15440; Other Eukaryotes - 1401 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative At3g43590, Description = Zinc finger, CCHC-type, PFAM = PF00098)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben044scf00002913ctg008_8029-10949' '(at4g00980 : 82.4) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: transcriptional coactivator p15 (PC4) family protein (KELP) (TAIR:AT4G10920.2); Has 580 Blast hits to 578 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 36; Fungi - 5; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative , Description = , PFAM = PF14223)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben044scf00004264ctg003_1065-10240' '(at5g07350 : 1260.0) RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.; TUDOR-SN protein 1 (Tudor1); CONTAINS InterPro DOMAIN/s: Staphylococcal nuclease (SNase-like) (InterPro:IPR006021), RNA-induced silencing complex, nuclease component Tudor-SN (InterPro:IPR016685), Staphylococcal nuclease (SNase-like), OB-fold (InterPro:IPR016071), Tudor subgroup (InterPro:IPR018351), Tudor domain (InterPro:IPR002999), Maternal tudor protein (InterPro:IPR008191); BEST Arabidopsis thaliana protein match is: TUDOR-SN protein 2 (TAIR:AT5G61780.1); Has 1297 Blast hits to 805 proteins in 208 species: Archae - 2; Bacteria - 27; Metazoa - 772; Fungi - 182; Plants - 145; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (gnl|cdd|37250 : 647.0) no description available & (gnl|cdd|84869 : 101.0) no description available & (reliability: 2520.0) & (original description: Putative SN4TDR, Description = 110 kDa 4SNc-Tudor domain protein, PFAM = PF00565;PF00565;PF00565;PF00565;PF00567)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben044scf00006091ctg011_10253-13611' '(at3g43590 : 151.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT3G43490.1); Has 22952 Blast hits to 17782 proteins in 462 species: Archae - 2; Bacteria - 65; Metazoa - 3265; Fungi - 1419; Plants - 1360; Viruses - 15440; Other Eukaryotes - 1401 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative PGSC0003DMG400005910, Description = Zinc knuckle family protein, PFAM = PF00098;PF00098)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben044scf00006091ctg016_189-4066' '(at3g43590 : 89.4) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT3G43490.1); Has 22952 Blast hits to 17782 proteins in 462 species: Archae - 2; Bacteria - 65; Metazoa - 3265; Fungi - 1419; Plants - 1360; Viruses - 15440; Other Eukaryotes - 1401 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative Os11g0573200, Description = Zinc finger, CCHC-type, PFAM = PF00098)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben044scf00014502ctg004_18575-25420' '(at3g02820 : 197.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|71399 : 108.0) no description available & (reliability: 394.0) & (original description: Putative BnaCnng05970D, Description = TIMELESS-interacting protein, PFAM = PF07962;PF00098)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben044scf00019064ctg003_4340-23191' '(at4g19190 : 328.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: CBF1-interacting co-repressor CIR, N-terminal (InterPro:IPR019339), Zinc finger, CCHC-type (InterPro:IPR001878); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38998 : 118.0) no description available & (reliability: 656.0) & (original description: Putative At4g19190, Description = BnaA01g09930D protein, PFAM = PF15288;PF10197)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben044scf00025628ctg009_2247-5038' '(at5g49400 : 138.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878); Has 46316 Blast hits to 20637 proteins in 1119 species: Archae - 19; Bacteria - 12274; Metazoa - 18717; Fungi - 3822; Plants - 2024; Viruses - 338; Other Eukaryotes - 9122 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative TIDP3543, Description = BnaC02g39060D protein, PFAM = PF13917)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben044scf00027521ctg007_2840-5090' '(at4g00980 : 83.2) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: transcriptional coactivator p15 (PC4) family protein (KELP) (TAIR:AT4G10920.2); Has 580 Blast hits to 578 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 36; Fungi - 5; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative pol, Description = Polyprotein, putative, PFAM = PF14223)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben044scf00029709ctg009_940-4861' '(at3g43590 : 97.1) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT3G43490.1); Has 22952 Blast hits to 17782 proteins in 462 species: Archae - 2; Bacteria - 65; Metazoa - 3265; Fungi - 1419; Plants - 1360; Viruses - 15440; Other Eukaryotes - 1401 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative BnaA06g20160D, Description = Cellular nucleic acid binding protein, putative, PFAM = PF00098;PF00098)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf00207_542391-571201' '(at3g43590 : 149.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT3G43490.1); Has 22952 Blast hits to 17782 proteins in 462 species: Archae - 2; Bacteria - 65; Metazoa - 3265; Fungi - 1419; Plants - 1360; Viruses - 15440; Other Eukaryotes - 1401 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative PGSC0003DMG401021491, Description = Cellular nucleic acid binding protein, putative, PFAM = PF00098;PF00098)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf00207_543893-570733' '(at3g43590 : 152.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT3G43490.1); Has 22952 Blast hits to 17782 proteins in 462 species: Archae - 2; Bacteria - 65; Metazoa - 3265; Fungi - 1419; Plants - 1360; Viruses - 15440; Other Eukaryotes - 1401 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative BnaC03g54400D, Description = Cellular nucleic acid binding protein, putative, PFAM = PF00098;PF00098)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf00377_212187-219640' '(at3g02820 : 198.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|71399 : 109.0) no description available & (gnl|cdd|38214 : 87.4) no description available & (reliability: 396.0) & (original description: Putative BnaCnng05970D, Description = BnaCnng05970D protein, PFAM = PF00098;PF07962)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf00595_978744-983813' '(at5g52380 : 243.0) VASCULAR-RELATED NAC-DOMAIN 6; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: zinc knuckle (CCHC-type) family protein (TAIR:AT3G43590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39601 : 86.8) no description available & (reliability: 486.0) & (original description: Putative At5g52380, Description = At5g52380, PFAM = PF00098;PF00098;PF14392;PF14392;PF14392)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf01688_260951-280883' '(at4g19190 : 334.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: CBF1-interacting co-repressor CIR, N-terminal (InterPro:IPR019339), Zinc finger, CCHC-type (InterPro:IPR001878); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38998 : 105.0) no description available & (reliability: 668.0) & (original description: Putative At4g19190, Description = BnaA01g09930D protein, PFAM = PF15288;PF10197)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf02175_79167-115294' '(at4g00980 : 93.6) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: transcriptional coactivator p15 (PC4) family protein (KELP) (TAIR:AT4G10920.2); Has 580 Blast hits to 578 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 36; Fungi - 5; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative HACRE1, Description = Copia-like retrotransposon, PFAM = PF14223)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf02581_327922-336456' '(at5g07350 : 1252.0) RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.; TUDOR-SN protein 1 (Tudor1); CONTAINS InterPro DOMAIN/s: Staphylococcal nuclease (SNase-like) (InterPro:IPR006021), RNA-induced silencing complex, nuclease component Tudor-SN (InterPro:IPR016685), Staphylococcal nuclease (SNase-like), OB-fold (InterPro:IPR016071), Tudor subgroup (InterPro:IPR018351), Tudor domain (InterPro:IPR002999), Maternal tudor protein (InterPro:IPR008191); BEST Arabidopsis thaliana protein match is: TUDOR-SN protein 2 (TAIR:AT5G61780.1); Has 1297 Blast hits to 805 proteins in 208 species: Archae - 2; Bacteria - 27; Metazoa - 772; Fungi - 182; Plants - 145; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (gnl|cdd|37250 : 636.0) no description available & (gnl|cdd|84869 : 102.0) no description available & (reliability: 2504.0) & (original description: Putative SN4TDR, Description = 110 kDa 4SNc-Tudor domain protein, PFAM = PF00565;PF00565;PF00565;PF00565;PF00567)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf02679_36962-39756' '(at5g49400 : 136.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878); Has 46316 Blast hits to 20637 proteins in 1119 species: Archae - 19; Bacteria - 12274; Metazoa - 18717; Fungi - 3822; Plants - 2024; Viruses - 338; Other Eukaryotes - 9122 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative TIDP3543, Description = BnaC02g39060D protein, PFAM = PF13917)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf03091_51813-56804' '(at3g62330 : 376.0) Zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878); Has 1256 Blast hits to 1123 proteins in 138 species: Archae - 0; Bacteria - 13; Metazoa - 788; Fungi - 82; Plants - 113; Viruses - 7; Other Eukaryotes - 253 (source: NCBI BLink). & (reliability: 752.0) & (original description: Putative BnaA09g39810D, Description = BnaA09g39810D protein, PFAM = )' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf03226_471183-474040' '(at4g00980 : 85.9) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: transcriptional coactivator p15 (PC4) family protein (KELP) (TAIR:AT4G10920.2); Has 580 Blast hits to 578 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 36; Fungi - 5; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative pol, Description = Polyprotein, putative, PFAM = PF14223)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf04093_102354-105013' '(at4g00980 : 89.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: transcriptional coactivator p15 (PC4) family protein (KELP) (TAIR:AT4G10920.2); Has 580 Blast hits to 578 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 36; Fungi - 5; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative , Description = , PFAM = PF14223)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf05077_178630-184829' '(at3g43590 : 248.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT3G43490.1); Has 22952 Blast hits to 17782 proteins in 462 species: Archae - 2; Bacteria - 65; Metazoa - 3265; Fungi - 1419; Plants - 1360; Viruses - 15440; Other Eukaryotes - 1401 (source: NCBI BLink). & (reliability: 496.0) & (original description: Putative PGSC0003DMG400002995, Description = Zinc finger, CCHC-type, PFAM = PF00098;PF00098;PF00098)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf07579_418002-441084' '(at5g07350 : 1276.0) RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.; TUDOR-SN protein 1 (Tudor1); CONTAINS InterPro DOMAIN/s: Staphylococcal nuclease (SNase-like) (InterPro:IPR006021), RNA-induced silencing complex, nuclease component Tudor-SN (InterPro:IPR016685), Staphylococcal nuclease (SNase-like), OB-fold (InterPro:IPR016071), Tudor subgroup (InterPro:IPR018351), Tudor domain (InterPro:IPR002999), Maternal tudor protein (InterPro:IPR008191); BEST Arabidopsis thaliana protein match is: TUDOR-SN protein 2 (TAIR:AT5G61780.1); Has 1297 Blast hits to 805 proteins in 208 species: Archae - 2; Bacteria - 27; Metazoa - 772; Fungi - 182; Plants - 145; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (gnl|cdd|37250 : 635.0) no description available & (gnl|cdd|84869 : 101.0) no description available & (reliability: 2552.0) & (original description: Putative SN4TDR, Description = 110 kDa 4SNc-Tudor domain protein, PFAM = PF00565;PF00565;PF00565;PF00565;PF00565;PF00567)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf07579_419927-422671' '(at5g07350 : 216.0) RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.; TUDOR-SN protein 1 (Tudor1); CONTAINS InterPro DOMAIN/s: Staphylococcal nuclease (SNase-like) (InterPro:IPR006021), RNA-induced silencing complex, nuclease component Tudor-SN (InterPro:IPR016685), Staphylococcal nuclease (SNase-like), OB-fold (InterPro:IPR016071), Tudor subgroup (InterPro:IPR018351), Tudor domain (InterPro:IPR002999), Maternal tudor protein (InterPro:IPR008191); BEST Arabidopsis thaliana protein match is: TUDOR-SN protein 2 (TAIR:AT5G61780.1); Has 1297 Blast hits to 805 proteins in 208 species: Archae - 2; Bacteria - 27; Metazoa - 772; Fungi - 182; Plants - 145; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (gnl|cdd|37250 : 116.0) no description available & (reliability: 432.0) & (original description: Putative SN4TDR, Description = Nuclease domain-containing protein 1, PFAM = PF00565;PF00567)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf08415_135122-140889' '(at5g52380 : 234.0) VASCULAR-RELATED NAC-DOMAIN 6; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: zinc knuckle (CCHC-type) family protein (TAIR:AT3G43590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39601 : 89.1) no description available & (reliability: 468.0) & (original description: Putative At5g52380, Description = At5g52380, PFAM = PF14392;PF14392;PF14392;PF00098;PF00098)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf11802_199608-213319' '(at3g43590 : 243.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT3G43490.1); Has 22952 Blast hits to 17782 proteins in 462 species: Archae - 2; Bacteria - 65; Metazoa - 3265; Fungi - 1419; Plants - 1360; Viruses - 15440; Other Eukaryotes - 1401 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative Sb05g022420, Description = Putative uncharacterized protein Sb05g022420, PFAM = PF00098;PF00098;PF00098)' T '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'niben101scf13289_209037-215603' '(at3g43590 : 244.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT3G43490.1); Has 22952 Blast hits to 17782 proteins in 462 species: Archae - 2; Bacteria - 65; Metazoa - 3265; Fungi - 1419; Plants - 1360; Viruses - 15440; Other Eukaryotes - 1401 (source: NCBI BLink). & (reliability: 488.0) & (original description: Putative Sb05g022420, Description = Putative uncharacterized protein Sb05g022420, PFAM = PF00098;PF00098;PF00098)' T '27.3.75' 'RNA.regulation of transcription.GRP' 'nbv0.3scaffold6778_16216-18878' '(p27484|grp2_nicsy : 127.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at2g21060 : 119.0) glycine-rich protein (AtGRP2b); glycine-rich protein 2B (GRP2B); FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Cold shock protein (InterPro:IPR011129), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine rich protein 2 (TAIR:AT4G38680.1); Has 124576 Blast hits to 52040 proteins in 3306 species: Archae - 178; Bacteria - 46955; Metazoa - 35565; Fungi - 6939; Plants - 11254; Viruses - 1676; Other Eukaryotes - 22009 (source: NCBI BLink). & (gnl|cdd|84686 : 83.3) no description available & (reliability: 238.0) & (original description: Putative CSP4, Description = Cold shock domain-containing protein 4, PFAM = PF00098;PF00098;PF00313)' T '27.3.75' 'RNA.regulation of transcription.GRP' 'nbv0.3scaffold67033_2976-5656' '(p27484|grp2_nicsy : 105.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at4g38680 : 86.3) Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development.; glycine rich protein 2 (GRP2); FUNCTIONS IN: double-stranded DNA binding, mRNA binding, single-stranded DNA binding, nucleic acid binding; INVOLVED IN: stamen development, vegetative to reproductive phase transition of meristem, response to cold, seed development, DNA duplex unwinding; LOCATED IN: nucleolus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 37 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold shock protein (InterPro:IPR011129), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine-rich protein 2B (TAIR:AT2G21060.1); Has 150401 Blast hits to 55289 proteins in 3379 species: Archae - 285; Bacteria - 51625; Metazoa - 48133; Fungi - 9113; Plants - 13783; Viruses - 1771; Other Eukaryotes - 25691 (source: NCBI BLink). & (gnl|cdd|84686 : 85.2) no description available & (reliability: 169.4) & (original description: Putative nab1, Description = Glycine-rich protein 2, PFAM = PF00098;PF00313)' T '27.3.75' 'RNA.regulation of transcription.GRP' 'nbv0.3scaffold96043_532-3460' '(p49310|grp1_sinal : 133.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 132.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 88.6) no description available & (gnl|cdd|35331 : 86.0) no description available & (reliability: 246.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T '27.3.75' 'RNA.regulation of transcription.GRP' 'nbv0.5scaffold617_550151-552872' '(p49310|grp1_sinal : 133.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 129.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 93.2) no description available & (gnl|cdd|35331 : 87.9) no description available & (reliability: 244.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T '27.3.75' 'RNA.regulation of transcription.GRP' 'nbv0.5scaffold617_550169-573595' '(p49310|grp1_sinal : 133.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 132.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 94.3) no description available & (gnl|cdd|35331 : 86.7) no description available & (reliability: 248.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T '27.3.75' 'RNA.regulation of transcription.GRP' 'nbv0.5scaffold2809_24299-27071' '(p49310|grp1_sinal : 136.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 130.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 90.5) no description available & (gnl|cdd|35331 : 86.3) no description available & (reliability: 248.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T '27.3.75' 'RNA.regulation of transcription.GRP' 'nbv0.5scaffold7257_15598-18305' '(p27484|grp2_nicsy : 102.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at4g38680 : 92.8) Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development.; glycine rich protein 2 (GRP2); FUNCTIONS IN: double-stranded DNA binding, mRNA binding, single-stranded DNA binding, nucleic acid binding; INVOLVED IN: stamen development, vegetative to reproductive phase transition of meristem, response to cold, seed development, DNA duplex unwinding; LOCATED IN: nucleolus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 37 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold shock protein (InterPro:IPR011129), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine-rich protein 2B (TAIR:AT2G21060.1); Has 150401 Blast hits to 55289 proteins in 3379 species: Archae - 285; Bacteria - 51625; Metazoa - 48133; Fungi - 9113; Plants - 13783; Viruses - 1771; Other Eukaryotes - 25691 (source: NCBI BLink). & (gnl|cdd|84686 : 84.5) no description available & (reliability: 184.0) & (original description: Putative nab1, Description = Glycine-rich protein 2, PFAM = PF00313;PF00098)' T '27.3.75' 'RNA.regulation of transcription.GRP' 'niben044scf00002658ctg002_2536-5118' '(p49310|grp1_sinal : 133.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 129.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 94.7) no description available & (gnl|cdd|35331 : 88.7) no description available & (reliability: 244.0) & (original description: Putative CCR1, Description = Glycine-rich RNA-binding protein 8, PFAM = PF00076)' T '27.3.75' 'RNA.regulation of transcription.GRP' 'niben044scf00003840ctg012_4402-7082' '(p27484|grp2_nicsy : 100.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|36139 : 86.5) no description available & (at4g38680 : 85.9) Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development.; glycine rich protein 2 (GRP2); FUNCTIONS IN: double-stranded DNA binding, mRNA binding, single-stranded DNA binding, nucleic acid binding; INVOLVED IN: stamen development, vegetative to reproductive phase transition of meristem, response to cold, seed development, DNA duplex unwinding; LOCATED IN: nucleolus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 37 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold shock protein (InterPro:IPR011129), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine-rich protein 2B (TAIR:AT2G21060.1); Has 150401 Blast hits to 55289 proteins in 3379 species: Archae - 285; Bacteria - 51625; Metazoa - 48133; Fungi - 9113; Plants - 13783; Viruses - 1771; Other Eukaryotes - 25691 (source: NCBI BLink). & (gnl|cdd|84686 : 85.2) no description available & (reliability: 169.4) & (original description: Putative CSP4, Description = Cold shock domain-containing protein 4, PFAM = PF00313;PF00098;PF00098)' T '27.3.75' 'RNA.regulation of transcription.GRP' 'niben044scf00004829ctg009_2555-5178' '(p27484|grp2_nicsy : 129.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at2g21060 : 97.4) glycine-rich protein (AtGRP2b); glycine-rich protein 2B (GRP2B); FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Cold shock protein (InterPro:IPR011129), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine rich protein 2 (TAIR:AT4G38680.1); Has 124576 Blast hits to 52040 proteins in 3306 species: Archae - 178; Bacteria - 46955; Metazoa - 35565; Fungi - 6939; Plants - 11254; Viruses - 1676; Other Eukaryotes - 22009 (source: NCBI BLink). & (gnl|cdd|36139 : 87.3) no description available & (gnl|cdd|84686 : 81.8) no description available & (reliability: 194.8) & (original description: Putative nab1, Description = Glycine-rich protein 2, PFAM = PF00098;PF00313)' T '27.3.75' 'RNA.regulation of transcription.GRP' 'niben101scf00929_63150-67295' '(p49310|grp1_sinal : 129.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 125.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|35331 : 85.6) no description available & (gnl|cdd|31068 : 83.2) no description available & (reliability: 238.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T '27.3.75' 'RNA.regulation of transcription.GRP' 'niben101scf01847_878226-880801' '(p27484|grp2_nicsy : 135.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at2g21060 : 97.4) glycine-rich protein (AtGRP2b); glycine-rich protein 2B (GRP2B); FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Cold shock protein (InterPro:IPR011129), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine rich protein 2 (TAIR:AT4G38680.1); Has 124576 Blast hits to 52040 proteins in 3306 species: Archae - 178; Bacteria - 46955; Metazoa - 35565; Fungi - 6939; Plants - 11254; Viruses - 1676; Other Eukaryotes - 22009 (source: NCBI BLink). & (gnl|cdd|36139 : 81.9) no description available & (gnl|cdd|84686 : 81.8) no description available & (reliability: 194.8) & (original description: Putative nab1, Description = Cold shock domain protein 1, PFAM = PF00313;PF00098)' T '27.3.75' 'RNA.regulation of transcription.GRP' 'niben101scf02658_185191-188189' '(p27484|grp2_nicsy : 100.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at2g21060 : 87.0) glycine-rich protein (AtGRP2b); glycine-rich protein 2B (GRP2B); FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Cold shock protein (InterPro:IPR011129), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine rich protein 2 (TAIR:AT4G38680.1); Has 124576 Blast hits to 52040 proteins in 3306 species: Archae - 178; Bacteria - 46955; Metazoa - 35565; Fungi - 6939; Plants - 11254; Viruses - 1676; Other Eukaryotes - 22009 (source: NCBI BLink). & (gnl|cdd|84686 : 85.6) no description available & (reliability: 174.0) & (original description: Putative cspA, Description = Glycine-rich protein 2, PFAM = PF00098;PF00313)' T '27.3.75' 'RNA.regulation of transcription.GRP' 'niben101scf03214_20133-23489' '(p49310|grp1_sinal : 133.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 129.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 94.0) no description available & (gnl|cdd|35331 : 87.9) no description available & (reliability: 244.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T '27.3.75' 'RNA.regulation of transcription.GRP' 'niben101scf03953_148970-151950' '(p49310|grp1_sinal : 136.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 130.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|35331 : 87.5) no description available & (gnl|cdd|31068 : 84.3) no description available & (reliability: 246.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T '27.3.75' 'RNA.regulation of transcription.GRP' 'niben101scf04327_280667-283777' '(p27484|grp2_nicsy : 101.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at4g38680 : 86.3) Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development.; glycine rich protein 2 (GRP2); FUNCTIONS IN: double-stranded DNA binding, mRNA binding, single-stranded DNA binding, nucleic acid binding; INVOLVED IN: stamen development, vegetative to reproductive phase transition of meristem, response to cold, seed development, DNA duplex unwinding; LOCATED IN: nucleolus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 37 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold shock protein (InterPro:IPR011129), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine-rich protein 2B (TAIR:AT2G21060.1); Has 150401 Blast hits to 55289 proteins in 3379 species: Archae - 285; Bacteria - 51625; Metazoa - 48133; Fungi - 9113; Plants - 13783; Viruses - 1771; Other Eukaryotes - 25691 (source: NCBI BLink). & (gnl|cdd|84686 : 85.2) no description available & (reliability: 169.4) & (original description: Putative nab1, Description = Glycine-rich protein 2, PFAM = PF00313;PF00098)' T '27.3.75' 'RNA.regulation of transcription.GRP' 'niben101scf06203_17991-20910' '(p49310|grp1_sinal : 133.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 132.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 86.6) no description available & (gnl|cdd|35331 : 84.8) no description available & (reliability: 246.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T '27.3.75' 'RNA.regulation of transcription.GRP' 'niben101scf09268_154841-157649' '(q03878|grp1_dauca : 138.0) Glycine-rich RNA-binding protein - Daucus carota (Carrot) & (at2g21660 : 129.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|35371 : 87.8) no description available & (gnl|cdd|31068 : 86.6) no description available & (reliability: 254.0) & (original description: Putative CCR1, Description = Glycine-rich RNA-binding protein 8, PFAM = PF00076)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'nbv0.3scaffold2054_78792-81475' '(at4g24660 : 186.0) homeobox protein 22 (HB22); CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 25 (TAIR:AT5G65410.1); Has 493 Blast hits to 471 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 490; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68346 : 106.0) no description available & (reliability: 372.0) & (original description: Putative hb1, Description = Zinc finger-homeodomain protein 1, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'nbv0.3scaffold9921_42128-45585' '(at1g75240 : 177.0) homeobox protein 33 (HB33); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 24 (TAIR:AT2G18350.1); Has 705 Blast hits to 675 proteins in 76 species: Archae - 0; Bacteria - 8; Metazoa - 117; Fungi - 10; Plants - 549; Viruses - 3; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|68346 : 108.0) no description available & (reliability: 354.0) & (original description: Putative ZHD6, Description = Zinc-finger homeodomain protein 6, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'nbv0.3scaffold11898_11876-15028' '(at5g65410 : 81.3) Encodes ZFHD2, a member of the zinc finger homeodomain transcriptional factor family.; homeobox protein 25 (HB25); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Zinc finger, C2H2-type (InterPro:IPR007087), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 22 (TAIR:AT4G24660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative PGSC0003DMG400041496, Description = , PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'nbv0.3scaffold15096_1507-4043' '(at1g14440 : 132.0) homeobox protein 31 (HB31); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 21 (TAIR:AT2G02540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative ZHD3, Description = Zinc finger-homeodomain protein 3, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'nbv0.3scaffold15396_31888-34685' '(at5g15210 : 155.0) Encodes ZFHD3, a member of the zinc finger homeodomain transcriptional factor family.; homeobox protein 30 (HB30); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 34 (TAIR:AT3G28920.1); Has 512 Blast hits to 491 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 36; Fungi - 0; Plants - 474; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68346 : 101.0) no description available & (reliability: 310.0) & (original description: Putative ZHD1, Description = Zinc finger-homeodomain protein 1, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'nbv0.3scaffold64545_2810-6356' '(at1g14440 : 209.0) homeobox protein 31 (HB31); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 21 (TAIR:AT2G02540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68346 : 108.0) no description available & (reliability: 418.0) & (original description: Putative ZHD4, Description = Zinc-finger homeodomain protein 4, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'nbv0.3scaffold125992_1-1844' '(at3g28920 : 195.0) homeobox protein 34 (HB34); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT5G39760.1); Has 606 Blast hits to 597 proteins in 84 species: Archae - 0; Bacteria - 8; Metazoa - 33; Fungi - 36; Plants - 501; Viruses - 5; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|68346 : 105.0) no description available & (reliability: 390.0) & (original description: Putative ZHD8, Description = Zinc-finger homeodomain protein 8, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'nbv0.5scaffold1791_105966-108450' '(at1g14440 : 109.0) homeobox protein 31 (HB31); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 21 (TAIR:AT2G02540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative HB33, Description = ZF-HD homeobox protein At4g24660 family, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben044scf00001404ctg001_17539-20650' '(at4g24660 : 84.0) homeobox protein 22 (HB22); CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 25 (TAIR:AT5G65410.1); Has 493 Blast hits to 471 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 490; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative PGSC0003DMG400041496, Description = , PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben044scf00008312ctg013_543-3282' '(at2g18350 : 108.0) homeobox protein 24 (HB24); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 28 (TAIR:AT3G50890.1); Has 497 Blast hits to 465 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 497; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative hb1, Description = Zinc finger-homeodomain protein 1, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben044scf00012106ctg012_4115-7377' '(at2g18350 : 188.0) homeobox protein 24 (HB24); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 28 (TAIR:AT3G50890.1); Has 497 Blast hits to 465 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 497; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68346 : 111.0) no description available & (reliability: 376.0) & (original description: Putative ZHD7, Description = Zinc-finger homeodomain protein 7, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf00021_262620-265255' '(at5g15210 : 155.0) Encodes ZFHD3, a member of the zinc finger homeodomain transcriptional factor family.; homeobox protein 30 (HB30); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 34 (TAIR:AT3G28920.1); Has 512 Blast hits to 491 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 36; Fungi - 0; Plants - 474; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68346 : 99.6) no description available & (reliability: 310.0) & (original description: Putative hb1, Description = ZF-HD homeobox protein At4g24660 family, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf00305_14729-17661' '(at2g18350 : 187.0) homeobox protein 24 (HB24); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 28 (TAIR:AT3G50890.1); Has 497 Blast hits to 465 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 497; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68346 : 109.0) no description available & (reliability: 374.0) & (original description: Putative ZHD1, Description = Zinc-finger homeodomain protein 2, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf00339_1371044-1374464' '(at3g28917 : 102.0) mini zinc finger 2 (MIF2); CONTAINS InterPro DOMAIN/s: ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456); BEST Arabidopsis thaliana protein match is: mini zinc finger (TAIR:AT1G18835.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68346 : 96.5) no description available & (reliability: 194.2) & (original description: Putative MIF2, Description = Mini zinc finger protein 2, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf00350_451246-454783' '(at1g75240 : 173.0) homeobox protein 33 (HB33); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 24 (TAIR:AT2G18350.1); Has 705 Blast hits to 675 proteins in 76 species: Archae - 0; Bacteria - 8; Metazoa - 117; Fungi - 10; Plants - 549; Viruses - 3; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|68346 : 107.0) no description available & (reliability: 346.0) & (original description: Putative ZHD2, Description = Zinc finger-homeodomain protein 2, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf00705_580180-583822' '(at1g14440 : 205.0) homeobox protein 31 (HB31); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 21 (TAIR:AT2G02540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68346 : 108.0) no description available & (reliability: 410.0) & (original description: Putative ZHD6, Description = Zinc-finger homeodomain protein 6, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf00966_112910-115704' '(at5g15210 : 159.0) Encodes ZFHD3, a member of the zinc finger homeodomain transcriptional factor family.; homeobox protein 30 (HB30); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 34 (TAIR:AT3G28920.1); Has 512 Blast hits to 491 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 36; Fungi - 0; Plants - 474; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68346 : 101.0) no description available & (reliability: 318.0) & (original description: Putative ZHD3, Description = Zinc finger-homeodomain protein 3, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf01326_188626-191699' '(at3g28920 : 200.0) homeobox protein 34 (HB34); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT5G39760.1); Has 606 Blast hits to 597 proteins in 84 species: Archae - 0; Bacteria - 8; Metazoa - 33; Fungi - 36; Plants - 501; Viruses - 5; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|68346 : 103.0) no description available & (reliability: 400.0) & (original description: Putative ZHD8, Description = Zinc-finger homeodomain protein 8, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf01372_647840-656248' '(at1g14440 : 202.0) homeobox protein 31 (HB31); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 21 (TAIR:AT2G02540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68346 : 105.0) no description available & (reliability: 404.0) & (original description: Putative ZHD1, Description = Zinc-finger homeodomain protein 2, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf01970_642201-645353' '(at5g65410 : 83.2) Encodes ZFHD2, a member of the zinc finger homeodomain transcriptional factor family.; homeobox protein 25 (HB25); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Zinc finger, C2H2-type (InterPro:IPR007087), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 22 (TAIR:AT4G24660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative PGSC0003DMG400041496, Description = , PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf03421_545709-548392' '(at4g24660 : 160.0) homeobox protein 22 (HB22); CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 25 (TAIR:AT5G65410.1); Has 493 Blast hits to 471 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 490; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68346 : 80.4) no description available & (reliability: 320.0) & (original description: Putative hb2, Description = ZF-HD homeobox protein At4g24660 family, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf03474_87933-91006' '(at3g28920 : 196.0) homeobox protein 34 (HB34); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT5G39760.1); Has 606 Blast hits to 597 proteins in 84 species: Archae - 0; Bacteria - 8; Metazoa - 33; Fungi - 36; Plants - 501; Viruses - 5; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|68346 : 109.0) no description available & (reliability: 392.0) & (original description: Putative ZHD11, Description = Zinc-finger homeodomain protein 11, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf04054_135454-139013' '(at4g24660 : 199.0) homeobox protein 22 (HB22); CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 25 (TAIR:AT5G65410.1); Has 493 Blast hits to 471 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 490; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68346 : 110.0) no description available & (reliability: 398.0) & (original description: Putative ZHD1, Description = Zinc finger homeodomain protein 1, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf04113_1665609-1669066' '(at1g75240 : 167.0) homeobox protein 33 (HB33); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 24 (TAIR:AT2G18350.1); Has 705 Blast hits to 675 proteins in 76 species: Archae - 0; Bacteria - 8; Metazoa - 117; Fungi - 10; Plants - 549; Viruses - 3; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|68346 : 108.0) no description available & (reliability: 334.0) & (original description: Putative ZHD2, Description = Zinc finger-homeodomain protein 2, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf04950_532523-536210' '(at4g24660 : 175.0) homeobox protein 22 (HB22); CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 25 (TAIR:AT5G65410.1); Has 493 Blast hits to 471 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 490; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68346 : 105.0) no description available & (reliability: 350.0) & (original description: Putative ZHD1, Description = Zinc finger-homeodomain protein 1, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf05060_326492-328773' '(at3g28917 : 89.7) mini zinc finger 2 (MIF2); CONTAINS InterPro DOMAIN/s: ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456); BEST Arabidopsis thaliana protein match is: mini zinc finger (TAIR:AT1G18835.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68346 : 85.0) no description available & (reliability: 168.0) & (original description: Putative MIF2, Description = Mini zinc finger protein 2, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf05060_340664-343731' '(at3g28920 : 197.0) homeobox protein 34 (HB34); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT5G39760.1); Has 606 Blast hits to 597 proteins in 84 species: Archae - 0; Bacteria - 8; Metazoa - 33; Fungi - 36; Plants - 501; Viruses - 5; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|68346 : 105.0) no description available & (reliability: 394.0) & (original description: Putative ZHD8, Description = Zinc-finger homeodomain protein 8, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf05565_238414-240950' '(at1g14440 : 132.0) homeobox protein 31 (HB31); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 21 (TAIR:AT2G02540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative ZHD3, Description = Zinc finger-homeodomain protein 3, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf09271_41666-47264' '(at4g24660 : 201.0) homeobox protein 22 (HB22); CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 25 (TAIR:AT5G65410.1); Has 493 Blast hits to 471 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 490; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68346 : 107.0) no description available & (reliability: 402.0) & (original description: Putative hb2, Description = ZF-HD homeobox protein, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf20961_93022-98497' '(at2g02540 : 180.0) Zinc finger homeobox protein. Expressed in vascular tissue. In a yeast one hybrid system was not able to transactivate a reporter gene.; homeobox protein 21 (HB21); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 31 (TAIR:AT1G14440.2); Has 496 Blast hits to 486 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 0; Plants - 476; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|68346 : 104.0) no description available & (reliability: 360.0) & (original description: Putative ZHD1, Description = Zinc-finger homeodomain protein 2, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf20961_95167-98518' '(at4g24660 : 181.0) homeobox protein 22 (HB22); CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 25 (TAIR:AT5G65410.1); Has 493 Blast hits to 471 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 490; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68346 : 106.0) no description available & (reliability: 362.0) & (original description: Putative ZHD1, Description = Zinc finger homeodomain protein 1, PFAM = PF04770)' T '27.3.80' 'RNA.regulation of transcription.zf-HD' 'niben101scf39169_1483-4887' '(at4g24660 : 192.0) homeobox protein 22 (HB22); CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 25 (TAIR:AT5G65410.1); Has 493 Blast hits to 471 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 490; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68346 : 112.0) no description available & (reliability: 384.0) & (original description: Putative hb1, Description = Zinc finger-homeodomain protein 1, PFAM = PF04770)' T '27.3.81' 'RNA.regulation of transcription.S1FA' '' '' '27.3.82' 'RNA.regulation of transcription.plant TF (pbf2)' 'niben044scf00029945ctg008_2542-8002' '(at1g14410 : 304.0) Encodes a homolog of the potato p24 protein. Binds single strand telomeric repeats. Negatively regulates telomerase activity and telomere length.; WHIRLY 1 (WHY1); FUNCTIONS IN: DNA binding, telomeric DNA binding; INVOLVED IN: negative regulation of telomere maintenance via telomerase, defense response; LOCATED IN: plastid chromosome, chloroplast, nucleoid, telomerase holoenzyme complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Plant transcription factor (InterPro:IPR013742); BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT2G02740.2); Has 106 Blast hits to 105 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|71964 : 248.0) no description available & (reliability: 604.0) & (original description: Putative WHY1, Description = Single-stranded DNA-binding protein WHY1, chloroplastic, PFAM = PF08536)' T '27.3.82' 'RNA.regulation of transcription.plant TF (pbf2)' 'niben101scf09644_28633-35099' '(at1g14410 : 301.0) Encodes a homolog of the potato p24 protein. Binds single strand telomeric repeats. Negatively regulates telomerase activity and telomere length.; WHIRLY 1 (WHY1); FUNCTIONS IN: DNA binding, telomeric DNA binding; INVOLVED IN: negative regulation of telomere maintenance via telomerase, defense response; LOCATED IN: plastid chromosome, chloroplast, nucleoid, telomerase holoenzyme complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Plant transcription factor (InterPro:IPR013742); BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT2G02740.2); Has 106 Blast hits to 105 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|71964 : 248.0) no description available & (reliability: 602.0) & (original description: Putative WHY2, Description = Single-stranded DNA-bindig protein WHY2, mitochondrial, PFAM = PF08536)' T '27.3.82' 'RNA.regulation of transcription.plant TF (pbf2)' 'niben101scf14523_42031-47491' '(at1g14410 : 304.0) Encodes a homolog of the potato p24 protein. Binds single strand telomeric repeats. Negatively regulates telomerase activity and telomere length.; WHIRLY 1 (WHY1); FUNCTIONS IN: DNA binding, telomeric DNA binding; INVOLVED IN: negative regulation of telomere maintenance via telomerase, defense response; LOCATED IN: plastid chromosome, chloroplast, nucleoid, telomerase holoenzyme complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Plant transcription factor (InterPro:IPR013742); BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT2G02740.2); Has 106 Blast hits to 105 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|71964 : 248.0) no description available & (reliability: 598.0) & (original description: Putative WHY1, Description = Single-stranded DNA-binding protein WHY1, chloroplastic, PFAM = PF08536)' T '27.3.83' 'RNA.regulation of transcription.GRF zinc finger family' 'nbv0.3scaffold37801_9777-13483' '(at4g37740 : 90.9) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower; growth-regulating factor 2 (GRF2); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 1 (TAIR:AT2G22840.1); Has 745 Blast hits to 714 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 24; Plants - 532; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative GRF1, Description = Glutamine-Leucine-Glutamine, QLQ, PFAM = PF08879;PF08880)' T '27.3.83' 'RNA.regulation of transcription.GRF zinc finger family' 'nbv0.5scaffold3677_213965-226761' '(at4g37740 : 90.1) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower; growth-regulating factor 2 (GRF2); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 1 (TAIR:AT2G22840.1); Has 745 Blast hits to 714 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 24; Plants - 532; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative GRF1, Description = Glutamine-Leucine-Glutamine, QLQ, PFAM = PF08880;PF08879)' T '27.3.83' 'RNA.regulation of transcription.GRF zinc finger family' 'niben101scf01121_148949-154898' '(at3g52910 : 177.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 4 (GRF4); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 3 (TAIR:AT2G36400.1); Has 959 Blast hits to 852 proteins in 46 species: Archae - 0; Bacteria - 4; Metazoa - 66; Fungi - 4; Plants - 523; Viruses - 0; Other Eukaryotes - 362 (source: NCBI BLink). & (gnl|cdd|72299 : 85.8) no description available & (reliability: 354.0) & (original description: Putative GRF4, Description = Growth-regulating factor 4, PFAM = PF08880;PF08879)' T '27.3.83' 'RNA.regulation of transcription.GRF zinc finger family' 'niben101scf02897_214283-220699' '(at3g52910 : 190.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 4 (GRF4); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 3 (TAIR:AT2G36400.1); Has 959 Blast hits to 852 proteins in 46 species: Archae - 0; Bacteria - 4; Metazoa - 66; Fungi - 4; Plants - 523; Viruses - 0; Other Eukaryotes - 362 (source: NCBI BLink). & (gnl|cdd|72299 : 85.0) no description available & (reliability: 380.0) & (original description: Putative GRF4, Description = Growth-regulating factor 4, PFAM = PF08880;PF08879)' T '27.3.83' 'RNA.regulation of transcription.GRF zinc finger family' 'niben101scf05222_398663-410073' '(at3g52910 : 209.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 4 (GRF4); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 3 (TAIR:AT2G36400.1); Has 959 Blast hits to 852 proteins in 46 species: Archae - 0; Bacteria - 4; Metazoa - 66; Fungi - 4; Plants - 523; Viruses - 0; Other Eukaryotes - 362 (source: NCBI BLink). & (gnl|cdd|72299 : 84.6) no description available & (reliability: 418.0) & (original description: Putative BnaC03g20100D, Description = BnaC03g20100D protein, PFAM = PF08880;PF08879)' T '27.3.84' 'RNA.regulation of transcription.BBR/BPC' 'nbv0.3scaffold3972_50284-53216' '(at1g14685 : 240.0) Arabidopsis GBP Basic Penta Cysteine 1; basic pentacysteine 2 (BPC2); CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: basic pentacysteine1 (TAIR:AT2G01930.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69723 : 211.0) no description available & (reliability: 480.0) & (original description: Putative BPC2, Description = Protein BASIC PENTACYSTEINE2, PFAM = PF06217)' T '27.3.84' 'RNA.regulation of transcription.BBR/BPC' 'nbv0.5scaffold2018_56672-60010' '(at5g42520 : 337.0) basic pentacysteine 6 (BPC6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: basic pentacysteine 4 (TAIR:AT2G21240.2); Has 233 Blast hits to 232 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 221; Viruses - 3; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69723 : 214.0) no description available & (reliability: 674.0) & (original description: Putative BPC6, Description = Protein BASIC PENTACYSTEINE6, PFAM = PF06217)' T '27.3.84' 'RNA.regulation of transcription.BBR/BPC' 'nbv0.5scaffold5670_47515-50441' '(at1g14685 : 243.0) Arabidopsis GBP Basic Penta Cysteine 1; basic pentacysteine 2 (BPC2); CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: basic pentacysteine1 (TAIR:AT2G01930.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69723 : 210.0) no description available & (reliability: 486.0) & (original description: Putative BPC2, Description = Protein BASIC PENTACYSTEINE2, PFAM = PF06217)' T '27.3.84' 'RNA.regulation of transcription.BBR/BPC' 'niben101scf00152_1802084-1805380' '(at5g42520 : 335.0) basic pentacysteine 6 (BPC6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: basic pentacysteine 4 (TAIR:AT2G21240.2); Has 233 Blast hits to 232 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 221; Viruses - 3; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69723 : 214.0) no description available & (reliability: 670.0) & (original description: Putative BPC6, Description = Protein BASIC PENTACYSTEINE6, PFAM = PF06217)' T '27.3.84' 'RNA.regulation of transcription.BBR/BPC' 'niben101scf00508_964227-967397' '(at5g42520 : 341.0) basic pentacysteine 6 (BPC6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: basic pentacysteine 4 (TAIR:AT2G21240.2); Has 233 Blast hits to 232 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 221; Viruses - 3; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69723 : 206.0) no description available & (reliability: 682.0) & (original description: Putative BBR/BPC3, Description = GAGA-binding transcriptional activator, PFAM = PF06217)' T '27.3.84' 'RNA.regulation of transcription.BBR/BPC' 'niben101scf00990_1-2592' '(at5g42520 : 357.0) basic pentacysteine 6 (BPC6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: basic pentacysteine 4 (TAIR:AT2G21240.2); Has 233 Blast hits to 232 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 221; Viruses - 3; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69723 : 206.0) no description available & (reliability: 714.0) & (original description: Putative BPC6, Description = Protein BASIC PENTACYSTEINE6, PFAM = PF06217)' T '27.3.84' 'RNA.regulation of transcription.BBR/BPC' 'niben101scf04052_179990-182835' '(at1g14685 : 300.0) Arabidopsis GBP Basic Penta Cysteine 1; basic pentacysteine 2 (BPC2); CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: basic pentacysteine1 (TAIR:AT2G01930.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69723 : 222.0) no description available & (reliability: 600.0) & (original description: Putative BPC1, Description = Protein BASIC PENTACYSTEINE1, PFAM = PF06217)' T '27.3.84' 'RNA.regulation of transcription.BBR/BPC' 'niben101scf05146_80397-83329' '(at1g14685 : 228.0) Arabidopsis GBP Basic Penta Cysteine 1; basic pentacysteine 2 (BPC2); CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: basic pentacysteine1 (TAIR:AT2G01930.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69723 : 209.0) no description available & (reliability: 456.0) & (original description: Putative BBR, Description = GAGA-binding transcriptional activator, PFAM = PF06217)' T '27.3.84' 'RNA.regulation of transcription.BBR/BPC' 'niben101scf06267_4200-7534' '(at5g42520 : 231.0) basic pentacysteine 6 (BPC6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: basic pentacysteine 4 (TAIR:AT2G21240.2); Has 233 Blast hits to 232 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 221; Viruses - 3; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69723 : 193.0) no description available & (reliability: 462.0) & (original description: Putative Os06g0130600, Description = Barley B recombinant-like protein D, PFAM = PF06217)' T '27.3.84' 'RNA.regulation of transcription.BBR/BPC' 'niben101scf10919_150350-153508' '(at2g21240 : 301.0) basic pentacysteine 4 (BPC4); CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: basic pentacysteine 5 (TAIR:AT4G38910.2); Has 263 Blast hits to 247 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 40; Fungi - 0; Plants - 219; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|69723 : 194.0) no description available & (reliability: 602.0) & (original description: Putative BPC4, Description = Protein BASIC PENTACYSTEINE4, PFAM = PF06217)' T '27.3.85' 'RNA.regulation of transcription.sigma like plant' 'nbv0.3scaffold542_61031-71559' '(at5g13730 : 304.0) Encodes sigma 4 factor, involved in regulating the activity of the plastid-encoded RNA polymerase PEP. Regulates the overall quantity of NDH complexes and thus influences NDH activity.; sigma factor 4 (SIG4); FUNCTIONS IN: DNA-directed RNA polymerase activity, sigma factor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma subunit 2 (TAIR:AT1G08540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30914 : 217.0) no description available & (reliability: 608.0) & (original description: Putative sig4, Description = Sigma factor, PFAM = PF04545;PF04542;PF04539)' T '27.3.85' 'RNA.regulation of transcription.sigma like plant' 'nbv0.5scaffold1676_411675-420018' '(at2g36990 : 459.0) Encodes a general sigma factor in chloroplasts and is probably responsible for the recognition of sigma 70 type standard bacteria-type multi-subunit RNA polymerase (PEP) promoters in young cotyledons. It is a substrate for regulatory phosphorylation by cpCK2, a nuclear-coded plastid-targeted casein kinase 2, that has been implicated as a key component in plant sigma factor phosphorylation and transcriptional regulation.; RNApolymerase sigma-subunit F (SIGF); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma factor, SigB/SigC/SigD, plastid (InterPro:IPR016262), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma subunit 2 (TAIR:AT1G08540.1); Has 23918 Blast hits to 23899 proteins in 2801 species: Archae - 0; Bacteria - 17084; Metazoa - 1; Fungi - 2; Plants - 241; Viruses - 15; Other Eukaryotes - 6575 (source: NCBI BLink). & (gnl|cdd|82219 : 253.0) no description available & (reliability: 918.0) & (original description: Putative sig6, Description = Sigma factor, PFAM = PF04542;PF04539;PF04545)' T '27.3.85' 'RNA.regulation of transcription.sigma like plant' 'niben044scf00034446ctg000_2171-8736' '(at1g08540 : 355.0) Enodes a subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme. SIG1 is induced by red and blue light.; RNApolymerase sigma subunit 2 (SIG2); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma-70 region 1.2 (InterPro:IPR009042), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma factor, SigB/SigC/SigD, plastid (InterPro:IPR016262), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma-subunit F (TAIR:AT2G36990.1); Has 24116 Blast hits to 24030 proteins in 2811 species: Archae - 0; Bacteria - 17119; Metazoa - 4; Fungi - 2; Plants - 243; Viruses - 12; Other Eukaryotes - 6736 (source: NCBI BLink). & (gnl|cdd|82219 : 205.0) no description available & (reliability: 710.0) & (original description: Putative rpoD, Description = RNA polymerase sigma factor SigA, PFAM = PF04539;PF04542)' T '27.3.85' 'RNA.regulation of transcription.sigma like plant' 'niben101scf00471_1-6568' '(at1g08540 : 547.0) Enodes a subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme. SIG1 is induced by red and blue light.; RNApolymerase sigma subunit 2 (SIG2); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma-70 region 1.2 (InterPro:IPR009042), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma factor, SigB/SigC/SigD, plastid (InterPro:IPR016262), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma-subunit F (TAIR:AT2G36990.1); Has 24116 Blast hits to 24030 proteins in 2811 species: Archae - 0; Bacteria - 17119; Metazoa - 4; Fungi - 2; Plants - 243; Viruses - 12; Other Eukaryotes - 6736 (source: NCBI BLink). & (gnl|cdd|82219 : 301.0) no description available & (reliability: 1094.0) & (original description: Putative sig2, Description = Sigma factor, PFAM = PF00140;PF04545;PF04539;PF04542)' T '27.3.85' 'RNA.regulation of transcription.sigma like plant' 'niben101scf00530_630485-637486' '(at5g24120 : 529.0) Encodes a specialized sigma factor that functions in regulation of plastid genes and is responsible for the light-dependent transcription at the psbD LRP. Activation of SIG5 is dependent upon blue light and mediated by cryptochromes.; sigma factor E (SIGE); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630), RNA polymerase sigma-70 factor (InterPro:IPR000943); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma subunit 2 (TAIR:AT1G08540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|82219 : 157.0) no description available & (reliability: 1058.0) & (original description: Putative sig5, Description = Sigma factor, PFAM = PF04542;PF04539;PF04539;PF04545)' T '27.3.85' 'RNA.regulation of transcription.sigma like plant' 'niben101scf02217_37514-52345' '(at3g53920 : 378.0) Encodes a sigma-like transcription factor, Sigma 3 (SIG3 or SIGC). As a subunit of chloroplast RNA polymerase, SIG3 confers the ability to recognize promoter sequences on the core enzyme. SIG3 transcribes specifically the psbN gene in plastids.; RNApolymerase sigma-subunit C (SIGC); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma factor, SigB/SigC/SigD, plastid (InterPro:IPR016262), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630), RNA polymerase sigma-70 factor (InterPro:IPR000943); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma subunit 2 (TAIR:AT1G08540.1); Has 22698 Blast hits to 22688 proteins in 2768 species: Archae - 0; Bacteria - 16386; Metazoa - 0; Fungi - 0; Plants - 273; Viruses - 4; Other Eukaryotes - 6035 (source: NCBI BLink). & (gnl|cdd|82219 : 189.0) no description available & (reliability: 756.0) & (original description: Putative sig3, Description = Sigma factor, PFAM = PF04539;PF04542;PF04545)' T '27.3.85' 'RNA.regulation of transcription.sigma like plant' 'niben101scf03115_346424-353312' '(at1g64860 : 533.0) Subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme; sigma factor A (SIGA); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma factor, region 2 (InterPro:IPR013325), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma-70 region 2 (InterPro:IPR007627); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma subunit 2 (TAIR:AT1G08540.1). & (gnl|cdd|82219 : 189.0) no description available & (reliability: 1066.0) & (original description: Putative sig1, Description = RNA polymerase sigma factor 1, PFAM = PF04542;PF04545;PF04539)' T '27.3.85' 'RNA.regulation of transcription.sigma like plant' 'niben101scf03154_12390-18707' '(at5g13730 : 305.0) Encodes sigma 4 factor, involved in regulating the activity of the plastid-encoded RNA polymerase PEP. Regulates the overall quantity of NDH complexes and thus influences NDH activity.; sigma factor 4 (SIG4); FUNCTIONS IN: DNA-directed RNA polymerase activity, sigma factor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma subunit 2 (TAIR:AT1G08540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30914 : 221.0) no description available & (reliability: 610.0) & (original description: Putative sig4, Description = Sigma factor, PFAM = PF04542;PF04545;PF12945;PF04539)' T '27.3.85' 'RNA.regulation of transcription.sigma like plant' 'niben101scf03576_92132-99478' '(at1g64860 : 594.0) Subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme; sigma factor A (SIGA); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma factor, region 2 (InterPro:IPR013325), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma-70 region 2 (InterPro:IPR007627); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma subunit 2 (TAIR:AT1G08540.1). & (gnl|cdd|82219 : 183.0) no description available & (reliability: 1188.0) & (original description: Putative sig1, Description = Sigma factor, PFAM = PF04545;PF04542;PF04539)' T '27.3.85' 'RNA.regulation of transcription.sigma like plant' 'niben101scf05483_182608-189786' '(at1g08540 : 471.0) Enodes a subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme. SIG1 is induced by red and blue light.; RNApolymerase sigma subunit 2 (SIG2); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma-70 region 1.2 (InterPro:IPR009042), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma factor, SigB/SigC/SigD, plastid (InterPro:IPR016262), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma-subunit F (TAIR:AT2G36990.1); Has 24116 Blast hits to 24030 proteins in 2811 species: Archae - 0; Bacteria - 17119; Metazoa - 4; Fungi - 2; Plants - 243; Viruses - 12; Other Eukaryotes - 6736 (source: NCBI BLink). & (gnl|cdd|82219 : 292.0) no description available & (reliability: 942.0) & (original description: Putative sig2, Description = Sigma factor, PFAM = PF04542;PF04539;PF04545)' T '27.3.85' 'RNA.regulation of transcription.sigma like plant' 'niben101scf12983_180936-187956' '(at1g64860 : 587.0) Subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme; sigma factor A (SIGA); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma factor, region 2 (InterPro:IPR013325), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma-70 region 2 (InterPro:IPR007627); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma subunit 2 (TAIR:AT1G08540.1). & (gnl|cdd|82219 : 179.0) no description available & (reliability: 1174.0) & (original description: Putative sig1, Description = Sigma factor, PFAM = PF04545;PF04539;PF04542)' T '27.3.85' 'RNA.regulation of transcription.sigma like plant' 'niben101scf14311_110030-117542' '(at2g36990 : 472.0) Encodes a general sigma factor in chloroplasts and is probably responsible for the recognition of sigma 70 type standard bacteria-type multi-subunit RNA polymerase (PEP) promoters in young cotyledons. It is a substrate for regulatory phosphorylation by cpCK2, a nuclear-coded plastid-targeted casein kinase 2, that has been implicated as a key component in plant sigma factor phosphorylation and transcriptional regulation.; RNApolymerase sigma-subunit F (SIGF); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma factor, SigB/SigC/SigD, plastid (InterPro:IPR016262), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma subunit 2 (TAIR:AT1G08540.1); Has 23918 Blast hits to 23899 proteins in 2801 species: Archae - 0; Bacteria - 17084; Metazoa - 1; Fungi - 2; Plants - 241; Viruses - 15; Other Eukaryotes - 6575 (source: NCBI BLink). & (gnl|cdd|82219 : 253.0) no description available & (reliability: 944.0) & (original description: Putative sig6, Description = Sigma factor, PFAM = PF04539;PF04545;PF04542)' T '27.3.85' 'RNA.regulation of transcription.sigma like plant' 'niben101scf16148_109506-117445' '(at3g53920 : 378.0) Encodes a sigma-like transcription factor, Sigma 3 (SIG3 or SIGC). As a subunit of chloroplast RNA polymerase, SIG3 confers the ability to recognize promoter sequences on the core enzyme. SIG3 transcribes specifically the psbN gene in plastids.; RNApolymerase sigma-subunit C (SIGC); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma factor, SigB/SigC/SigD, plastid (InterPro:IPR016262), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630), RNA polymerase sigma-70 factor (InterPro:IPR000943); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma subunit 2 (TAIR:AT1G08540.1); Has 22698 Blast hits to 22688 proteins in 2768 species: Archae - 0; Bacteria - 16386; Metazoa - 0; Fungi - 0; Plants - 273; Viruses - 4; Other Eukaryotes - 6035 (source: NCBI BLink). & (gnl|cdd|81791 : 180.0) no description available & (reliability: 756.0) & (original description: Putative sig3, Description = Sigma factor, PFAM = PF04542;PF04539;PF04545)' T '27.3.86' 'RNA.regulation of transcription.BSD domain containing family' 'nbv0.3scaffold65149_5572-13488' '(at1g10720 : 174.0) BSD domain-containing protein; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT3G49800.1); Has 1569 Blast hits to 1461 proteins in 180 species: Archae - 0; Bacteria - 14; Metazoa - 740; Fungi - 179; Plants - 264; Viruses - 21; Other Eukaryotes - 351 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative bsd, Description = BSD domain containing protein, expressed, PFAM = PF03909)' T '27.3.86' 'RNA.regulation of transcription.BSD domain containing family' 'niben101scf01774_218463-224875' '(at1g10720 : 183.0) BSD domain-containing protein; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT3G49800.1); Has 1569 Blast hits to 1461 proteins in 180 species: Archae - 0; Bacteria - 14; Metazoa - 740; Fungi - 179; Plants - 264; Viruses - 21; Other Eukaryotes - 351 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative bsd, Description = BSD domain containing protein, expressed, PFAM = PF03909)' T '27.3.86' 'RNA.regulation of transcription.BSD domain containing family' 'niben101scf05035_500760-506930' '(at1g10720 : 183.0) BSD domain-containing protein; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT3G49800.1); Has 1569 Blast hits to 1461 proteins in 180 species: Archae - 0; Bacteria - 14; Metazoa - 740; Fungi - 179; Plants - 264; Viruses - 21; Other Eukaryotes - 351 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative bsd, Description = BSD domain containing protein, expressed, PFAM = PF03909)' T '27.3.86' 'RNA.regulation of transcription.BSD domain containing family' 'niben101scf07797_153340-161779' '(at1g10720 : 174.0) BSD domain-containing protein; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT3G49800.1); Has 1569 Blast hits to 1461 proteins in 180 species: Archae - 0; Bacteria - 14; Metazoa - 740; Fungi - 179; Plants - 264; Viruses - 21; Other Eukaryotes - 351 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative bsd, Description = BSD domain containing protein, expressed, PFAM = PF03909)' T '27.3.87' 'RNA.regulation of transcription.VOZ' '' '' '27.3.88' 'RNA.regulation of transcription.rcd1-like' '' '' '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'nbv0.3scaffold39807_688-3965' '(at4g18830 : 109.0) Member of the ovate protein family.Interacts with BLH1 and KNAT3. Regulates the subcellular localization of BLH1.; ovate family protein 5 (OFP5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 4 (TAIR:AT1G06920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68419 : 84.5) no description available & (reliability: 218.0) & (original description: Putative OFP1, Description = Ovate family protein 1, PFAM = PF04844)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'nbv0.3scaffold94420_2370-4768' '(at5g04820 : 166.0) ovate family protein 13 (OFP13); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 15 (TAIR:AT2G36050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative OFP13, Description = Transcription repressor OFP13, PFAM = PF04844)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'nbv0.5scaffold67_63470-66495' '(at5g01840 : 92.4) Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. Functions as a transcriptional repressor that suppresses cell elongation.; ovate family protein 1 (OFP1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: N-terminal protein myristoylation, regulation of unidimensional cell growth; LOCATED IN: nucleolus, cytoskeleton; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 3 (TAIR:AT5G58360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68419 : 87.2) no description available & (reliability: 184.8) & (original description: Putative OFP1, Description = Ovate family protein 1, PFAM = PF13724;PF04844)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'nbv0.5scaffold1339_408852-411679' '(at2g36050 : 85.9) ovate family protein 15 (OFP15); LOCATED IN: chloroplast; EXPRESSED IN: sepal, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 18 (TAIR:AT3G52540.1); Has 245 Blast hits to 245 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 244; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative Sb05g003530, Description = Putative uncharacterized protein Sb05g003530, PFAM = PF04844)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'nbv0.5scaffold1645_289342-292646' '(at4g18830 : 107.0) Member of the ovate protein family.Interacts with BLH1 and KNAT3. Regulates the subcellular localization of BLH1.; ovate family protein 5 (OFP5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 4 (TAIR:AT1G06920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68419 : 83.8) no description available & (reliability: 214.0) & (original description: Putative OFP1, Description = Ovate transcriptional repressor, PFAM = PF04844)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'nbv0.5scaffold1881_30422-33823' '(at2g18500 : 101.0) ovate family protein 7 (OFP7); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, embryo, hypocotyl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 8 (TAIR:AT5G19650.1); Has 500 Blast hits to 498 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 5; Plants - 493; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68419 : 86.5) no description available & (reliability: 202.0) & (original description: Putative OFP6, Description = ATOFP3/OFP3, PFAM = PF04844)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'nbv0.5scaffold3073_186818-191436' '(at5g58360 : 97.4) ovate family protein 3 (OFP3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 4 (TAIR:AT1G06920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68419 : 86.5) no description available & (reliability: 194.8) & (original description: Putative OFP1, Description = Ovate transcriptional repressor, PFAM = PF04844;PF13724)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben044scf00003220ctg020_304-3789' '(at2g18500 : 100.0) ovate family protein 7 (OFP7); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, embryo, hypocotyl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 8 (TAIR:AT5G19650.1); Has 500 Blast hits to 498 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 5; Plants - 493; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68419 : 84.5) no description available & (reliability: 200.0) & (original description: Putative OFP6, Description = AtOFP6, PFAM = PF04844)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben044scf00010468ctg035_4797-8114' '(at5g19650 : 82.0) ovate family protein 8 (OFP8); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 7 (TAIR:AT2G18500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative OFP8, Description = AtOFP8, PFAM = PF04844)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben044scf00024423ctg008_1789-4679' '(at5g58360 : 103.0) ovate family protein 3 (OFP3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 4 (TAIR:AT1G06920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68419 : 83.8) no description available & (reliability: 206.0) & (original description: Putative PGSC0003DMG400030384, Description = Ovate transcriptional repressor, PFAM = PF04844;PF13724)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben044scf00028647ctg003_2591-5595' '(at5g01840 : 92.0) Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. Functions as a transcriptional repressor that suppresses cell elongation.; ovate family protein 1 (OFP1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: N-terminal protein myristoylation, regulation of unidimensional cell growth; LOCATED IN: nucleolus, cytoskeleton; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 3 (TAIR:AT5G58360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68419 : 88.0) no description available & (reliability: 184.0) & (original description: Putative OFP1, Description = Ovate family protein 1, PFAM = PF04844;PF13724)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben044scf00044928ctg001_480-3505' '(at5g01840 : 92.8) Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. Functions as a transcriptional repressor that suppresses cell elongation.; ovate family protein 1 (OFP1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: N-terminal protein myristoylation, regulation of unidimensional cell growth; LOCATED IN: nucleolus, cytoskeleton; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 3 (TAIR:AT5G58360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68419 : 87.2) no description available & (reliability: 185.6) & (original description: Putative OFP1, Description = Ovate family protein 1, PFAM = PF13724;PF04844)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben044scf00049515ctg002_1-2153' '(at1g06920 : 92.4) ovate family protein 4 (OFP4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 2 (TAIR:AT2G30400.1); Has 524 Blast hits to 514 proteins in 51 species: Archae - 0; Bacteria - 6; Metazoa - 52; Fungi - 2; Plants - 429; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|68419 : 90.7) no description available & (reliability: 184.8) & (original description: Putative OFP1, Description = Ovate family protein 1, PFAM = PF04844;PF13724)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben044scf00050859ctg004_1257-4200' '(at5g04820 : 99.8) ovate family protein 13 (OFP13); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 15 (TAIR:AT2G36050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68419 : 81.4) no description available & (reliability: 199.6) & (original description: Putative ATOFP18, Description = Putative uncharacterized protein Sb05g003530, PFAM = PF04844)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben044scf00058761ctg002_11792-13702' '(at2g18500 : 100.0) ovate family protein 7 (OFP7); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, embryo, hypocotyl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 8 (TAIR:AT5G19650.1); Has 500 Blast hits to 498 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 5; Plants - 493; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative OFP6, Description = OFP transcription factor, PFAM = PF04844)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf01290_215138-218010' '(at5g58360 : 104.0) ovate family protein 3 (OFP3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 4 (TAIR:AT1G06920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68419 : 83.8) no description available & (reliability: 208.0) & (original description: Putative BnaA05g12010D, Description = BnaA05g12010D protein, PFAM = PF04844;PF13724)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf01371_308532-311195' '(at2g18500 : 98.6) ovate family protein 7 (OFP7); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, embryo, hypocotyl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 8 (TAIR:AT5G19650.1); Has 500 Blast hits to 498 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 5; Plants - 493; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 197.2) & (original description: Putative OFP6, Description = OFP transcription factor, PFAM = PF04844)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf01372_310715-313587' '(at5g04820 : 104.0) ovate family protein 13 (OFP13); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 15 (TAIR:AT2G36050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative OFP15, Description = AtOFP15, PFAM = PF04844)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf01417_501567-504559' '(at5g01840 : 91.7) Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. Functions as a transcriptional repressor that suppresses cell elongation.; ovate family protein 1 (OFP1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: N-terminal protein myristoylation, regulation of unidimensional cell growth; LOCATED IN: nucleolus, cytoskeleton; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 3 (TAIR:AT5G58360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68419 : 86.5) no description available & (reliability: 183.4) & (original description: Putative OFP1, Description = Ovate transcriptional repressor, PFAM = PF13724;PF04844)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf01834_467244-469987' '(at5g04820 : 132.0) ovate family protein 13 (OFP13); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 15 (TAIR:AT2G36050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68419 : 81.8) no description available & (reliability: 264.0) & (original description: Putative OFP13, Description = Transcription repressor OFP13, PFAM = PF04844)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf02030_110989-114177' '(at1g79960 : 119.0) ovate family protein 14 (OFP14); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 13 (TAIR:AT5G04820.1); Has 451 Blast hits to 451 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 29; Plants - 394; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative PGSC0003DMG400005682, Description = Ovate family protein 14, putative, PFAM = PF04844)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf02319_786719-789759' '(at5g19650 : 82.4) ovate family protein 8 (OFP8); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 7 (TAIR:AT2G18500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative OFP8, Description = AtOFP8, PFAM = PF04844)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf02563_177789-181844' '(at2g18500 : 124.0) ovate family protein 7 (OFP7); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, embryo, hypocotyl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 8 (TAIR:AT5G19650.1); Has 500 Blast hits to 498 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 5; Plants - 493; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68419 : 86.1) no description available & (reliability: 248.0) & (original description: Putative OFP6, Description = OFP transcription factor, PFAM = PF04844)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf02783_130448-133302' '(at5g04820 : 88.6) ovate family protein 13 (OFP13); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 15 (TAIR:AT2G36050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative ATOFP18, Description = Putative uncharacterized protein Sb05g003530, PFAM = PF04844)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf03693_554496-557866' '(at2g18500 : 87.8) ovate family protein 7 (OFP7); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, embryo, hypocotyl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 8 (TAIR:AT5G19650.1); Has 500 Blast hits to 498 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 5; Plants - 493; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative OFP8, Description = AtOFP8, PFAM = PF04844)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf04608_266379-269116' '(at5g04820 : 161.0) ovate family protein 13 (OFP13); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 15 (TAIR:AT2G36050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative OFP13, Description = Transcription repressor OFP13, PFAM = PF04844)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf05948_296310-302791' '(at4g18830 : 106.0) Member of the ovate protein family.Interacts with BLH1 and KNAT3. Regulates the subcellular localization of BLH1.; ovate family protein 5 (OFP5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 4 (TAIR:AT1G06920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68419 : 82.6) no description available & (reliability: 212.0) & (original description: Putative OFP1, Description = Ovate transcriptional repressor, PFAM = PF04844)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf08034_56743-59294' '(at3g52525 : 88.6) ovate family protein 6 (OFP6); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: Ovate family protein (TAIR:AT2G36026.1); Has 453 Blast hits to 451 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 453; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative OFP6, Description = AtOFP6, PFAM = PF04844)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf08341_1122144-1125319' '(at5g19650 : 84.3) ovate family protein 8 (OFP8); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 7 (TAIR:AT2G18500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative OFP6, Description = Ovate family protein, PFAM = PF04844)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf08931_34155-37395' '(at5g19650 : 89.0) ovate family protein 8 (OFP8); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 7 (TAIR:AT2G18500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative OFP1, Description = Ovate family protein 1, PFAM = PF04844)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf09232_74226-77251' '(at1g06920 : 93.2) ovate family protein 4 (OFP4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 2 (TAIR:AT2G30400.1); Has 524 Blast hits to 514 proteins in 51 species: Archae - 0; Bacteria - 6; Metazoa - 52; Fungi - 2; Plants - 429; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|68419 : 87.2) no description available & (reliability: 186.4) & (original description: Putative OFP1, Description = Ovate family protein 1, PFAM = PF13724;PF04844)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf10774_228935-231531' '(at2g36026 : 117.0) Ovate family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 6 (TAIR:AT3G52525.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative OFP6, Description = AtOFP6, PFAM = PF04844)' T '27.3.89' 'RNA.regulation of transcription.ovate family OFP' 'niben101scf13680_7917-10924' '(at1g06920 : 97.4) ovate family protein 4 (OFP4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 2 (TAIR:AT2G30400.1); Has 524 Blast hits to 514 proteins in 51 species: Archae - 0; Bacteria - 6; Metazoa - 52; Fungi - 2; Plants - 429; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|68419 : 90.7) no description available & (reliability: 194.8) & (original description: Putative OFP1, Description = Ovate family protein 1, PFAM = PF13724;PF04844)' T '27.3.90' 'RNA.regulation of transcription.Tify' '' '' '27.3.90.1' 'RNA.regulation of transcription.Tify.Tify' '' '' '27.3.90.2' 'RNA.regulation of transcription.Tify.JAZ' '' '' '27.3.90.3' 'RNA.regulation of transcription.Tify.PPD family' '' '' '27.3.90.4' 'RNA.regulation of transcription.Tify.ZML' '' '' '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold867_4445-8436' '(at5g13150 : 553.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein C1 (EXO70C1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein C2 (TAIR:AT5G13990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37555 : 465.0) no description available & (gnl|cdd|86233 : 348.0) no description available & (reliability: 1106.0) & (original description: Putative BnaA03g04210D, Description = BnaA03g04210D protein, PFAM = PF03081)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold1043_57224-61217' '(at1g04500 : 182.0) CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT2G33350.2); Has 1789 Blast hits to 1789 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 2; Plants - 1654; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|87043 : 81.4) no description available & (reliability: 364.0) & (original description: Putative ASL2, Description = CCT motif family protein, PFAM = PF06203)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold1502_66799-69345' '(gnl|cdd|84686 : 87.2) no description available & (at4g36020 : 86.3) Encodes a cold shock domain protein. Involved in cold acclimation by blocking the secondary structure of mRNA which in turn facilitates translation at cold temperature.; cold shock domain protein 1 (CSDP1); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Cold shock protein (InterPro:IPR011129), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: cold shock domain protein 3 (TAIR:AT2G17870.1); Has 93964 Blast hits to 39618 proteins in 2725 species: Archae - 55; Bacteria - 19157; Metazoa - 4501; Fungi - 1919; Plants - 2885; Viruses - 60267; Other Eukaryotes - 5180 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative cspA, Description = Cold-shock protein, PFAM = PF00098;PF00098;PF00098;PF00313)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold1520_45795-64106' '(at5g43100 : 733.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G50050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36553 : 241.0) no description available & (gnl|cdd|84452 : 125.0) no description available & (q6yny7|asp1_orysa : 107.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 1466.0) & (original description: Putative Sb02g038150, Description = Putative uncharacterized protein Sb02g038150, PFAM = PF14541;PF14543)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold2748_64118-66751' '(at2g36000 : 188.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G34620.1); Has 802 Blast hits to 604 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 0; Plants - 717; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|66247 : 100.0) no description available & (gnl|cdd|36481 : 87.8) no description available & (reliability: 376.0) & (original description: Putative BnaA03g16480D, Description = BnaA03g16480D protein, PFAM = PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold3958_37903-46306' '(at1g77930 : 266.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G36040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35934 : 88.6) no description available & (gnl|cdd|30832 : 85.3) no description available & (reliability: 532.0) & (original description: Putative At1g77930, Description = At1g77930, PFAM = PF00226)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold4961_1545-14995' '(at3g20800 : 508.0) Cell differentiation, Rcd1-like protein; CONTAINS InterPro DOMAIN/s: Cell differentiation, Rcd1-like (InterPro:IPR007216); BEST Arabidopsis thaliana protein match is: Cell differentiation, Rcd1-like protein (TAIR:AT5G12980.1); Has 491 Blast hits to 488 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 160; Fungi - 135; Plants - 110; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|80055 : 426.0) no description available & (gnl|cdd|38246 : 422.0) no description available & (reliability: 1016.0) & (original description: Putative RQCD1, Description = Cell differentiation protein RCD1 homolog, PFAM = PF04078)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold5093_29623-36145' '(at1g45207 : 285.0) Remorin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT4G36970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67381 : 87.0) no description available & (reliability: 570.0) & (original description: Putative At1g45207, Description = Remorin-like protein, PFAM = PF03763)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold5531_32409-43239' '(at1g07705 : 630.0) NOT2 / NOT3 / NOT5 family; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282); BEST Arabidopsis thaliana protein match is: VIRE2 interacting protein 2 (TAIR:AT5G59710.1); Has 3259 Blast hits to 2610 proteins in 429 species: Archae - 0; Bacteria - 983; Metazoa - 821; Fungi - 441; Plants - 185; Viruses - 8; Other Eukaryotes - 821 (source: NCBI BLink). & (gnl|cdd|86562 : 196.0) no description available & (gnl|cdd|37361 : 97.0) no description available & (reliability: 1254.0) & (original description: Putative VIP2, Description = Probable NOT transcription complex subunit VIP2, PFAM = PF04153)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold6593_52905-59155' '(at4g22910 : 653.0) FIZZY-related 2 (FZR2); FUNCTIONS IN: signal transducer activity; INVOLVED IN: trichome branching, signal transduction, DNA endoreduplication, cell growth; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: cell cycle switch protein 52 A2 (TAIR:AT4G11920.1); Has 43458 Blast hits to 22953 proteins in 693 species: Archae - 46; Bacteria - 6865; Metazoa - 16440; Fungi - 9775; Plants - 5102; Viruses - 0; Other Eukaryotes - 5230 (source: NCBI BLink). & (gnl|cdd|35526 : 474.0) no description available & (gnl|cdd|29257 : 137.0) no description available & (reliability: 1278.0) & (original description: Putative FZR2, Description = Protein FIZZY-RELATED 2, PFAM = PF12894;PF00400;PF00400;PF00400)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold6778_16216-18878' '(p27484|grp2_nicsy : 127.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at2g21060 : 119.0) glycine-rich protein (AtGRP2b); glycine-rich protein 2B (GRP2B); FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Cold shock protein (InterPro:IPR011129), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine rich protein 2 (TAIR:AT4G38680.1); Has 124576 Blast hits to 52040 proteins in 3306 species: Archae - 178; Bacteria - 46955; Metazoa - 35565; Fungi - 6939; Plants - 11254; Viruses - 1676; Other Eukaryotes - 22009 (source: NCBI BLink). & (gnl|cdd|84686 : 83.3) no description available & (reliability: 220.0) & (original description: Putative CSP4, Description = Cold shock domain-containing protein 4, PFAM = PF00098;PF00098;PF00313)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold7577_51496-54401' '(at4g17600 : 202.0) Encodes Lil3:1 (light-harvesting-like) protein. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. A generic LHC motif is present in Lil3:1.; LIL3:1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT5G47110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative LIL3:1, Description = Lil3 protein, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold8206_29215-42355' '(at5g63610 : 649.0) significant sequence similarity to plant and animal cyclin-dependent protein kinases, and was classified as an E-type CDK with a SPTAIRE cyclin binding motif in the kinase domain.; cyclin-dependent kinase E;1 (CDKE;1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G67580.2); Has 122304 Blast hits to 120929 proteins in 4501 species: Archae - 96; Bacteria - 13482; Metazoa - 46432; Fungi - 12531; Plants - 29277; Viruses - 477; Other Eukaryotes - 20009 (source: NCBI BLink). & (gnl|cdd|35885 : 489.0) no description available & (gnl|cdd|47550 : 249.0) no description available & (p23111|cdc2_maize : 224.0) Cell division control protein 2 homolog (EC 2.7.11.22) (EC 2.7.11.23) (p34cdc2) - Zea mays (Maize) & (reliability: 1298.0) & (original description: Putative cdk8, Description = Cyclin-dependent kinase 8, PFAM = PF00069)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold10644_22210-25556' '(at1g64830 : 364.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G33340.1); Has 3478 Blast hits to 3458 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 661; Fungi - 712; Plants - 1893; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36553 : 220.0) no description available & (gnl|cdd|84452 : 97.2) no description available & (reliability: 690.0) & (original description: Putative CDR1, Description = Aspartic proteinase CDR1, PFAM = PF14543;PF14541)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold12126_2830-38684' '(at2g01540 : 209.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G70790.1); Has 3447 Blast hits to 2959 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 1768; Fungi - 600; Plants - 764; Viruses - 0; Other Eukaryotes - 315 (source: NCBI BLink). & (gnl|cdd|36248 : 195.0) no description available & (gnl|cdd|84577 : 80.8) no description available & (reliability: 416.0) & (original description: Putative CAR7, Description = Protein C2-DOMAIN ABA-RELATED 7, PFAM = PF00168)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold12284_1693-4802' '(at4g14465 : 200.0) AT-hook motif nuclear-localized protein 20 (AHL20); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 19 (TAIR:AT3G04570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 131.0) no description available & (reliability: 398.0) & (original description: Putative AHL20, Description = AT-hook motif nuclear-localized protein 20, PFAM = PF03479)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold13020_20528-24556' '(at4g17900 : 243.0) PLATZ transcription factor family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT1G32700.1); Has 399 Blast hits to 399 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 399; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 184.0) no description available & (reliability: 486.0) & (original description: Putative PLTZ2, Description = PLATZ transcription factor family protein, PFAM = PF04640)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold13781_30093-38138' '(at3g19130 : 421.0) RNA-binding protein 47B (RBP47B); FUNCTIONS IN: RNA binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47A (TAIR:AT1G49600.1); Has 37628 Blast hits to 21966 proteins in 866 species: Archae - 14; Bacteria - 2376; Metazoa - 18486; Fungi - 4600; Plants - 6856; Viruses - 8; Other Eukaryotes - 5288 (source: NCBI BLink). & (gnl|cdd|35370 : 136.0) no description available & (gnl|cdd|31068 : 90.5) no description available & (reliability: 790.0) & (original description: Putative RBP47, Description = Polyadenylate-binding protein RBP47, PFAM = PF00076;PF00076;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold14565_1389-11440' '(at5g58470 : 155.0) TBP-associated factor 15B (TAF15b); FUNCTIONS IN: binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: TBP-associated factor 15 (TAIR:AT1G50300.1); Has 115051 Blast hits to 45140 proteins in 2321 species: Archae - 166; Bacteria - 28654; Metazoa - 42717; Fungi - 9006; Plants - 12716; Viruses - 1451; Other Eukaryotes - 20341 (source: NCBI BLink). & (gnl|cdd|36139 : 88.4) no description available & (reliability: 310.0) & (original description: Putative BnaAnng16380D, Description = BnaAnng16380D protein, PFAM = PF00641;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold15063_24702-37309' '(at5g16680 : 327.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT3G02890.1); Has 6870 Blast hits to 4822 proteins in 413 species: Archae - 8; Bacteria - 605; Metazoa - 3213; Fungi - 704; Plants - 729; Viruses - 19; Other Eukaryotes - 1592 (source: NCBI BLink). & (reliability: 654.0) & (original description: Putative BnaAnng12780D, Description = Tyrosine-protein kinase BAZ1B, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold15604_282-4976' '(at1g32540 : 153.0) Encodes a protein with 3 plant-specific zinc finger domains that acts as a positive regulator of cell death.; lsd one like 1 (LOL1); FUNCTIONS IN: DNA binding; INVOLVED IN: induction of apoptosis; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735); BEST Arabidopsis thaliana protein match is: LSD1 zinc finger family protein (TAIR:AT4G20380.7); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative LOL3, Description = Protein LOL3, PFAM = PF06943;PF06943;PF06943)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold15996_34310-37303' '(at4g00840 : 156.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G60800.1); Has 5117 Blast hits to 5115 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 766; Plants - 830; Viruses - 0; Other Eukaryotes - 1332 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative PAT12, Description = S-acyltransferase, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold16643_28536-34244' '(at1g56460 : 150.0) HIT zinc finger ;PAPA-1-like conserved region; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, HIT-type (InterPro:IPR007529), PAPA-1-like conserved region (InterPro:IPR006880); BEST Arabidopsis thaliana protein match is: HIT zinc finger ;PAPA-1-like conserved region (TAIR:AT2G47350.1). & (gnl|cdd|68370 : 106.0) no description available & (reliability: 300.0) & (original description: Putative PAPA1, Description = PAPA-1-like family protein, PFAM = PF04438;PF04795)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold18993_1370-3897' '(at3g48550 : 101.0) BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G01940.3); Has 78 Blast hits to 78 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative PGSC0003DMG400018091, Description = OSIGBa0148P16.3 protein, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold19066_16662-28794' '(at5g45550 : 389.0) Mob1/phocein family protein; CONTAINS InterPro DOMAIN/s: Mob1/phocein (InterPro:IPR005301); BEST Arabidopsis thaliana protein match is: Mob1/phocein family protein (TAIR:AT4G19045.1); Has 1269 Blast hits to 1261 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 709; Fungi - 290; Plants - 115; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|35661 : 316.0) no description available & (gnl|cdd|86392 : 243.0) no description available & (reliability: 766.0) & (original description: Putative mats, Description = MOB kinase activator 1B, PFAM = PF03637)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold20361_18123-24835' '(at1g07360 : 603.0) CCCH-type zinc fingerfamily protein with RNA-binding domain; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: CCCH-type zinc fingerfamily protein with RNA-binding domain (TAIR:AT2G29580.1); Has 18250 Blast hits to 13471 proteins in 794 species: Archae - 12; Bacteria - 1319; Metazoa - 6997; Fungi - 3518; Plants - 3570; Viruses - 267; Other Eukaryotes - 2567 (source: NCBI BLink). & (gnl|cdd|35375 : 464.0) no description available & (reliability: 1206.0) & (original description: Putative rbm22, Description = Pre-mRNA-splicing factor RBM22, PFAM = PF16131;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold20397_5557-17320' '(at1g20110 : 473.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT3G14270.1); Has 29282 Blast hits to 20083 proteins in 828 species: Archae - 11; Bacteria - 1932; Metazoa - 10999; Fungi - 6486; Plants - 4104; Viruses - 590; Other Eukaryotes - 5160 (source: NCBI BLink). & (gnl|cdd|85407 : 92.7) no description available & (reliability: 946.0) & (original description: Putative Sb02g037120, Description = Putative uncharacterized protein Sb02g037120, PFAM = PF08416;PF01363)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold20804_4804-22406' '(at2g30580 : 401.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 2 (DRIP2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 1 (TAIR:AT1G06770.1); Has 1631 Blast hits to 1626 proteins in 163 species: Archae - 0; Bacteria - 2; Metazoa - 1227; Fungi - 58; Plants - 232; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|37871 : 129.0) no description available & (reliability: 760.0) & (original description: Putative DRIP2, Description = E3 ubiquitin protein ligase DRIP2, PFAM = PF13923)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold21033_21633-25377' '(at1g32540 : 162.0) Encodes a protein with 3 plant-specific zinc finger domains that acts as a positive regulator of cell death.; lsd one like 1 (LOL1); FUNCTIONS IN: DNA binding; INVOLVED IN: induction of apoptosis; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735); BEST Arabidopsis thaliana protein match is: LSD1 zinc finger family protein (TAIR:AT4G20380.7); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative LOL1, Description = Protein LOL1, PFAM = PF06943;PF06943;PF06943)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold21204_23156-26672' '(at1g64830 : 340.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G33340.1); Has 3478 Blast hits to 3458 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 661; Fungi - 712; Plants - 1893; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36553 : 208.0) no description available & (gnl|cdd|84452 : 87.2) no description available & (reliability: 642.0) & (original description: Putative At2g35615, Description = Probable aspartic protease At2g35615, PFAM = PF14543;PF14541)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold22022_9135-24112' '(at2g33835 : 96.7) Encodes a zinc finger domain containing protein that is expressed in the shoot/root apex and vasculature, and acts with FRI to repress flowering.FES1 mutants in a Col(FRI+) background will flower early under inductive conditions.; FRIGIDA-ESSENTIAL 1 (FES1); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: positive regulation of vernalization response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, vascular tissue, root tip; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT3G18640.1); Has 279 Blast hits to 165 proteins in 46 species: Archae - 0; Bacteria - 31; Metazoa - 18; Fungi - 38; Plants - 89; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative PGSC0003DMG400045292, Description = Zinc finger family protein, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold22231_18766-25227' '(at3g48440 : 297.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G63260.1); Has 1758 Blast hits to 1034 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 389; Fungi - 243; Plants - 962; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (q5jlb5|zfnl2_orysa : 213.0) Zinc finger CCCH domain-containing protein ZFN-like 2 - Oryza sativa (Rice) & (gnl|cdd|36890 : 96.5) no description available & (reliability: 594.0) & (original description: Putative At3g48440, Description = Zinc finger CCCH domain-containing protein 43, PFAM = PF00642;PF00642;PF00642;PF00642)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold23921_1178-10558' '(at3g48440 : 328.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G63260.1); Has 1758 Blast hits to 1034 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 389; Fungi - 243; Plants - 962; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (q5jlb5|zfnl2_orysa : 221.0) Zinc finger CCCH domain-containing protein ZFN-like 2 - Oryza sativa (Rice) & (gnl|cdd|36890 : 113.0) no description available & (reliability: 656.0) & (original description: Putative PGSC0003DMG400015168, Description = Zinc finger CCCH domain-containing protein 43, PFAM = PF00642;PF00642;PF00642;PF00642;PF14608)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold24265_22297-29425' '(at1g47500 : 429.0) RNA-binding protein 47C' (RBP47C'); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47C (TAIR:AT1G47490.1); Has 31938 Blast hits to 20447 proteins in 871 species: Archae - 18; Bacteria - 2118; Metazoa - 16550; Fungi - 3781; Plants - 6384; Viruses - 46; Other Eukaryotes - 3041 (source: NCBI BLink). & (gnl|cdd|35370 : 130.0) no description available & (gnl|cdd|31068 : 88.6) no description available & (reliability: 858.0) & (original description: Putative nbp1, Description = Nucleic acid binding protein, PFAM = PF00076;PF00076;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold24796_9495-18297' '(at1g19860 : 119.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G66270.1); Has 210 Blast hits to 187 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 12; Plants - 160; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative PGSC0003DMG400003555, Description = Zinc finger C-x8-C-x5-C-x3-H type family protein, putative, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold24828_23084-28244' '(at4g26000 : 185.0) Encodes a novel Arabidopsis gene encoding a polypeptide with K-homology (KH) RNA-binding modules, which acts on vegetative growth and pistil development. Genetic studies suggest that PEP interacts with element(s) of the CLAVATA signaling pathway.; PEPPER (PEP); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: shoot development, gynoecium development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT3G04610.1); Has 2804 Blast hits to 2065 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 1818; Fungi - 225; Plants - 670; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|37401 : 107.0) no description available & (reliability: 370.0) & (original description: Putative FLK, Description = Poly(RC)-binding-like protein, PFAM = PF00013;PF00013)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold26608_16496-27103' '(at1g43850 : 458.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 916.0) & (original description: Putative SEU, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold29020_13396-16746' '(at4g17900 : 332.0) PLATZ transcription factor family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT1G32700.1); Has 399 Blast hits to 399 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 399; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 196.0) no description available & (reliability: 664.0) & (original description: Putative PLTZ2, Description = PLATZ transcription factor, PFAM = PF04640)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold29241_14811-23400' '(at3g48050 : 998.0) BAH domain ;TFIIS helical bundle-like domain; FUNCTIONS IN: transcription regulator activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type (InterPro:IPR003617), Transcription factor IIS, N-terminal (InterPro:IPR017923), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: BAH domain ;TFIIS helical bundle-like domain (TAIR:AT3G48060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37097 : 234.0) no description available & (gnl|cdd|72853 : 189.0) no description available & (reliability: 1996.0) & (original description: Putative BnaA09g06260D, Description = BnaA09g06260D protein, PFAM = PF08711;PF01426)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold29888_5162-14103' '(at2g28450 : 741.0) zinc finger (CCCH-type) family protein; FUNCTIONS IN: zinc ion binding, RNA methyltransferase activity, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), (Uracil-5)-methyltransferase (InterPro:IPR010280); BEST Arabidopsis thaliana protein match is: RNA methyltransferase family protein (TAIR:AT3G21300.1). & (gnl|cdd|37398 : 283.0) no description available & (gnl|cdd|32446 : 149.0) no description available & (reliability: 1482.0) & (original description: Putative At2g28450, Description = Zinc finger CCCH domain-containing protein 24, PFAM = PF05958;PF13847;PF00642)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold32168_1-5386' '(at1g06770 : 192.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. The DRIP1-GFP fusion protein is nuclear-localized. DRIP1 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 1 (DRIP1); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 2 (TAIR:AT2G30580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative PGSC0003DMG400004205, Description = E3 ubiquitin protein ligase DRIP2, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold32470_16556-25249' '(at2g47850 : 369.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1); Has 1724 Blast hits to 1003 proteins in 159 species: Archae - 0; Bacteria - 7; Metazoa - 368; Fungi - 218; Plants - 971; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (q5naw2|zfnl1_orysa : 346.0) Zinc finger CCCH domain-containing protein ZFN-like 1 - Oryza sativa (Rice) & (gnl|cdd|36890 : 103.0) no description available & (reliability: 738.0) & (original description: Putative Os01g0258700, Description = Zinc finger CCCH domain-containing protein 6, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold32764_8172-14611' '(at2g47850 : 452.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1); Has 1724 Blast hits to 1003 proteins in 159 species: Archae - 0; Bacteria - 7; Metazoa - 368; Fungi - 218; Plants - 971; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (q5naw2|zfnl1_orysa : 338.0) Zinc finger CCCH domain-containing protein ZFN-like 1 - Oryza sativa (Rice) & (gnl|cdd|36890 : 123.0) no description available & (reliability: 904.0) & (original description: Putative At2g47850, Description = Zinc finger CCCH domain-containing protein 32, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold32870_2873-11613' '(at2g20280 : 218.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 6263 Blast hits to 4194 proteins in 354 species: Archae - 14; Bacteria - 176; Metazoa - 2274; Fungi - 740; Plants - 301; Viruses - 209; Other Eukaryotes - 2549 (source: NCBI BLink). & (gnl|cdd|36974 : 142.0) no description available & (gnl|cdd|34849 : 91.8) no description available & (reliability: 436.0) & (original description: Putative Zc3h15, Description = Zinc finger CCCH domain-containing protein 15, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold35057_4402-10124' '(at5g63280 : 310.0) C2H2-like zinc finger protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT5G40710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 620.0) & (original description: Putative C2H2L3, Description = C2H2L domain class transcription factor, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold35278_6390-13591' '(at5g11470 : 125.0) bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Bromo adjacent homology (BAH) domain (InterPro:IPR001025); BEST Arabidopsis thaliana protein match is: nucleic acid binding (TAIR:AT3G15605.4); Has 602 Blast hits to 478 proteins in 106 species: Archae - 0; Bacteria - 17; Metazoa - 295; Fungi - 38; Plants - 91; Viruses - 4; Other Eukaryotes - 157 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative At5g11470, Description = BnaA03g03350D protein, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold36333_16287-19702' '(at1g25510 : 423.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G18490.1); Has 4139 Blast hits to 4120 proteins in 342 species: Archae - 0; Bacteria - 0; Metazoa - 1183; Fungi - 740; Plants - 2035; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|36553 : 238.0) no description available & (reliability: 842.0) & (original description: Putative nep2, Description = Aspartic proteinase nepenthesin-1, PFAM = PF14541;PF14543)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold37247_10214-19511' '(at1g20110 : 419.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT3G14270.1); Has 29282 Blast hits to 20083 proteins in 828 species: Archae - 11; Bacteria - 1932; Metazoa - 10999; Fungi - 6486; Plants - 4104; Viruses - 590; Other Eukaryotes - 5160 (source: NCBI BLink). & (gnl|cdd|47412 : 89.0) no description available & (reliability: 838.0) & (original description: Putative Sb02g037120, Description = Putative uncharacterized protein Sb02g037120, PFAM = PF01363)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold39713_15659-18660' '(at2g23945 : 162.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT4G30030.1); Has 2014 Blast hits to 2006 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 158; Fungi - 70; Plants - 1675; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|36553 : 116.0) no description available & (reliability: 324.0) & (original description: Putative , Description = , PFAM = PF14543;PF14541)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold40306_12327-22472' '(at1g64260 : 134.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 100.0) no description available & (reliability: 268.0) & (original description: Putative At3g04605, Description = Putative muDR family transposase-like, PFAM = PF10551;PF03108;PF04434;PF00564)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold40424_12739-17287' '(at1g45207 : 187.0) Remorin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT4G36970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative PGSC0003DMG400004040, Description = Carboxy-terminal region remorin, PFAM = PF03763)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold40516_6070-10175' '(at5g13990 : 554.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein C2 (EXO70C2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, exocyst; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein C1 (TAIR:AT5G13150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37555 : 464.0) no description available & (gnl|cdd|86233 : 352.0) no description available & (reliability: 1050.0) & (original description: Putative EXO70C2, Description = Exocyst subunit exo70 family protein C2, PFAM = PF03081)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold40737_1-19071' '(at5g40660 : 220.0) ATP12 protein-related; INVOLVED IN: proton-transporting ATP synthase complex assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP12, ATPase F1F0-assembly protein (InterPro:IPR011419); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38225 : 128.0) no description available & (gnl|cdd|70990 : 125.0) no description available & (reliability: 440.0) & (original description: Putative At5g40660, Description = Putative ovule protein, PFAM = PF07542)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold40827_5481-11436' '(at5g40660 : 363.0) ATP12 protein-related; INVOLVED IN: proton-transporting ATP synthase complex assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP12, ATPase F1F0-assembly protein (InterPro:IPR011419); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38225 : 253.0) no description available & (gnl|cdd|70990 : 142.0) no description available & (reliability: 726.0) & (original description: Putative OJ1003_C06.132, Description = Os07g0644000 protein, PFAM = PF07542)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold42777_6051-18141' '(at3g12680 : 507.0) Member of the floral homeotic AGAMOUS pathway.; ENHANCER OF AG-4 1 (HUA1); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT2G47850.3); Has 2136 Blast hits to 795 proteins in 118 species: Archae - 0; Bacteria - 0; Metazoa - 325; Fungi - 89; Plants - 1572; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (q9swf9|zfnl_pea : 187.0) Zinc finger CCCH domain-containing protein ZFN-like - Pisum sativum (Garden pea) & (gnl|cdd|36890 : 93.5) no description available & (reliability: 1014.0) & (original description: Putative HUA1, Description = Zinc finger CCCH domain-containing protein 37, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642;PF00642)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold43008_670-9648' '(at5g54310 : 354.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. Regulates membrane trafficking and organ separation.; ARF-GAP domain 5 (AGD5); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: floral organ abscission, activation of ARF GTPase activity; LOCATED IN: cytosol, trans-Golgi network, endosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 15 (TAIR:AT3G17660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35922 : 178.0) no description available & (gnl|cdd|85433 : 156.0) no description available & (reliability: 708.0) & (original description: Putative AGD5, Description = Probable ADP-ribosylation factor GTPase-activating protein AGD5, PFAM = PF01412)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold43494_10047-15650' '(at1g04500 : 157.0) CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT2G33350.2); Has 1789 Blast hits to 1789 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 2; Plants - 1654; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|87043 : 80.2) no description available & (reliability: 314.0) & (original description: Putative ASL2, Description = CCT motif family protein, PFAM = PF06203)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold43494_10267-15169' '(at1g04500 : 157.0) CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT2G33350.2); Has 1789 Blast hits to 1789 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 2; Plants - 1654; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|87043 : 83.3) no description available & (reliability: 314.0) & (original description: Putative ASL2, Description = CCT motif family protein, PFAM = PF06203)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold44626_4292-17050' '(at2g02070 : 282.0) indeterminate(ID)-domain 5 (IDD5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 4 (TAIR:AT2G02080.1); Has 61158 Blast hits to 25844 proteins in 587 species: Archae - 8; Bacteria - 480; Metazoa - 52168; Fungi - 1154; Plants - 982; Viruses - 10; Other Eukaryotes - 6356 (source: NCBI BLink). & (reliability: 550.0) & (original description: Putative IDD5, Description = Protein indeterminate-domain 5, chloroplastic, PFAM = PF12171)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold45460_8698-15513' '(at5g23290 : 201.0) prefoldin 5 (PFD5); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin alpha-like (InterPro:IPR004127), Prefoldin (InterPro:IPR009053), Prefoldin alpha subunit (InterPro:IPR011599); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38258 : 156.0) no description available & (gnl|cdd|29840 : 96.5) no description available & (reliability: 402.0) & (original description: Putative pfd5, Description = Putative prefoldin subunit 5, PFAM = PF02996)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold45559_10856-16219' '(at1g04500 : 176.0) CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT2G33350.2); Has 1789 Blast hits to 1789 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 2; Plants - 1654; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|87043 : 80.6) no description available & (reliability: 352.0) & (original description: Putative ASL2, Description = CCT motif family protein, PFAM = PF06203)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold47963_1234-7204' '(at5g13240 : 322.0) transcription regulators; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: negative regulation of transcription from RNA polymerase III promoter; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Maf1 regulator (InterPro:IPR015257), RNA polymerase III transcriptional repressor, MAF1 (InterPro:IPR017152); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72591 : 167.0) no description available & (gnl|cdd|38314 : 151.0) no description available & (reliability: 644.0) & (original description: Putative MAF1, Description = Repressor of RNA polymerase III transcription, PFAM = PF09174)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold48421_4287-9423' '(at1g01160 : 86.7) Arabidopsis thaliana GRF1-interacting factor 2 (GIF2) mRNA; GRF1-interacting factor 2 (GIF2); FUNCTIONS IN: protein binding, transcription coactivator activity; INVOLVED IN: cell proliferation, leaf development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SSXT (InterPro:IPR007726); BEST Arabidopsis thaliana protein match is: GRF1-interacting factor 3 (TAIR:AT4G00850.1); Has 35 Blast hits to 35 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 5; Plants - 17; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative AN3, Description = AtGIF1, PFAM = PF05030)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold49267_2490-6299' '(at3g45260 : 298.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G60470.1); Has 54288 Blast hits to 20581 proteins in 284 species: Archae - 0; Bacteria - 7; Metazoa - 49362; Fungi - 343; Plants - 724; Viruses - 2; Other Eukaryotes - 3850 (source: NCBI BLink). & (reliability: 580.0) & (original description: Putative IDD4, Description = Protein indeterminate-domain 4, chloroplastic, PFAM = PF12171)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold49492_4456-15380' '(at1g69710 : 860.0) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-related (InterPro:IPR017455), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Pleckstrin homology-type (InterPro:IPR011993), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G19420.1); Has 25088 Blast hits to 10396 proteins in 690 species: Archae - 87; Bacteria - 2712; Metazoa - 10178; Fungi - 1575; Plants - 3087; Viruses - 5; Other Eukaryotes - 7444 (source: NCBI BLink). & (gnl|cdd|34783 : 131.0) no description available & (gnl|cdd|36640 : 102.0) no description available & (reliability: 1684.0) & (original description: Putative PRAF1, Description = Regulator of chromosome condensation and FYVE zinc finger domain-containing protein, PFAM = PF13713;PF08381;PF01363;PF00415;PF00415;PF00415;PF00415;PF00415;PF00415)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold50457_1-9205' '(at1g01930 : 427.0) zinc finger protein-related; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); Has 1975 Blast hits to 1659 proteins in 367 species: Archae - 3; Bacteria - 303; Metazoa - 582; Fungi - 382; Plants - 105; Viruses - 11; Other Eukaryotes - 589 (source: NCBI BLink). & (gnl|cdd|37716 : 378.0) no description available & (reliability: 854.0) & (original description: Putative Os04g0574600, Description = Os04g0574600 protein, PFAM = PF13857)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold54978_1525-7773' '(at2g02160 : 284.0) CCCH-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 10885 Blast hits to 7444 proteins in 511 species: Archae - 23; Bacteria - 415; Metazoa - 5228; Fungi - 922; Plants - 581; Viruses - 184; Other Eukaryotes - 3532 (source: NCBI BLink). & (gnl|cdd|39988 : 169.0) no description available & (reliability: 568.0) & (original description: Putative At2g02160, Description = Zinc finger CCCH domain-containing protein 17, PFAM = PF14608;PF15663)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold56348_950-13016' '(at1g19860 : 222.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G66270.1); Has 210 Blast hits to 187 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 12; Plants - 160; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 444.0) & (original description: Putative At1g19860, Description = Zinc finger CCCH domain-containing protein 6, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold56720_8640-12835' '(at1g64260 : 181.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 95.8) no description available & (reliability: 362.0) & (original description: Putative Sb08g020220, Description = Putative uncharacterized protein Sb08g020220, PFAM = PF03108;PF10551;PF04434)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold57443_19713-22917' '(at4g27000 : 211.0) ATRBP45C; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative dbdA, Description = Polyadenylate-binding protein RBP47B, PFAM = PF00076;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold60037_1-5593' '(p93788|remo_soltu : 103.0) Remorin (pp34) - Solanum tuberosum (Potato) & (at3g61260 : 97.1) Remorin family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT2G45820.1); Has 8155 Blast hits to 5353 proteins in 884 species: Archae - 12; Bacteria - 2269; Metazoa - 1454; Fungi - 651; Plants - 718; Viruses - 174; Other Eukaryotes - 2877 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative REM2, Description = Remorin 2, PFAM = PF03763)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold60198_8708-11823' '(at5g07900 : 154.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT1G21150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36481 : 102.0) no description available & (gnl|cdd|66247 : 93.1) no description available & (reliability: 308.0) & (original description: Putative PGSC0003DMG401027557, Description = Putative ovule protein, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold62127_2920-11321' '(at1g43850 : 564.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1128.0) & (original description: Putative M7J2, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold63180_6945-10050' '(at1g58330 : 144.0) ZW2; BEST Arabidopsis thaliana protein match is: RESPONSE TO ABA AND SALT 1 (TAIR:AT1G09950.1); Has 556 Blast hits to 556 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 556; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p23923|hbp1b_wheat : 87.4) Transcription factor HBP-1b(c38) - Triticum aestivum (Wheat) & (reliability: 288.0) & (original description: Putative PGSC0003DMG400011102, Description = DOG1 domain-containing protein, PFAM = PF14144)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold63293_1576-10931' '(at2g30580 : 410.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 2 (DRIP2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 1 (TAIR:AT1G06770.1); Has 1631 Blast hits to 1626 proteins in 163 species: Archae - 0; Bacteria - 2; Metazoa - 1227; Fungi - 58; Plants - 232; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|37871 : 126.0) no description available & (reliability: 774.0) & (original description: Putative DRIP2, Description = E3 ubiquitin protein ligase DRIP2, PFAM = PF13923)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold65184_1782-7384' '(at1g53860 : 296.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT1G30320.1); Has 458 Blast hits to 455 proteins in 58 species: Archae - 2; Bacteria - 9; Metazoa - 29; Fungi - 14; Plants - 379; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|67381 : 100.0) no description available & (reliability: 592.0) & (original description: Putative BnaCnng57840D, Description = BnaCnng57840D protein, PFAM = PF03763)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold66919_7166-10059' '(at1g20110 : 161.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT3G14270.1); Has 29282 Blast hits to 20083 proteins in 828 species: Archae - 11; Bacteria - 1932; Metazoa - 10999; Fungi - 6486; Plants - 4104; Viruses - 590; Other Eukaryotes - 5160 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative FREE1, Description = Os07g0573300 protein, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold67033_2976-5656' '(p27484|grp2_nicsy : 105.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at4g38680 : 86.3) Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development.; glycine rich protein 2 (GRP2); FUNCTIONS IN: double-stranded DNA binding, mRNA binding, single-stranded DNA binding, nucleic acid binding; INVOLVED IN: stamen development, vegetative to reproductive phase transition of meristem, response to cold, seed development, DNA duplex unwinding; LOCATED IN: nucleolus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 37 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold shock protein (InterPro:IPR011129), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine-rich protein 2B (TAIR:AT2G21060.1); Has 150401 Blast hits to 55289 proteins in 3379 species: Archae - 285; Bacteria - 51625; Metazoa - 48133; Fungi - 9113; Plants - 13783; Viruses - 1771; Other Eukaryotes - 25691 (source: NCBI BLink). & (gnl|cdd|84686 : 85.2) no description available & (reliability: 163.2) & (original description: Putative nab1, Description = Glycine-rich protein 2, PFAM = PF00098;PF00313)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold68436_1-7937' '(at4g21430 : 404.0) B160; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, RING-type (InterPro:IPR001841), Transcription factor jumonji (InterPro:IPR013129), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G11950.1); Has 965 Blast hits to 873 proteins in 89 species: Archae - 0; Bacteria - 0; Metazoa - 302; Fungi - 24; Plants - 623; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|36570 : 248.0) no description available & (reliability: 808.0) & (original description: Putative glysoja_014359, Description = Lysine-specific demethylase 3A-A, PFAM = PF08879;PF02373)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold77643_1529-5241' '(at3g60400 : 532.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G06810.1); Has 395 Blast hits to 388 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 394; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 1064.0) & (original description: Putative MTERF18, Description = Transcription termination factor MTEF18, mitochondrial, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold78059_4088-7550' '(at5g66730 : 289.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 2 (TAIR:AT3G50700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 532.0) & (original description: Putative IDD1, Description = Protein indeterminate-domain 1, PFAM = PF00096)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold81250_4030-6917' '(at4g38160 : 434.0) pigment defective 191 (pde191); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G21710.1). & (gnl|cdd|36481 : 129.0) no description available & (gnl|cdd|66247 : 125.0) no description available & (reliability: 868.0) & (original description: Putative MTERF6, Description = Transcription termination factor MTERF6, chloroplastic/mitochondrial, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold81378_2773-6227' '(at3g18490 : 482.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G25510.1); Has 4095 Blast hits to 4076 proteins in 356 species: Archae - 0; Bacteria - 4; Metazoa - 1079; Fungi - 788; Plants - 1999; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|36553 : 239.0) no description available & (gnl|cdd|84452 : 89.5) no description available & (reliability: 964.0) & (original description: Putative ASPG1, Description = Protein ASPARTIC PROTEASE IN GUARD CELL 1, PFAM = PF14541;PF14543)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold91268_1-4827' '(at3g63140 : 584.0) Encodes a protein with ribonuclease activity that is involved in plastid rRNA maturation.; chloroplast stem-loop binding protein of 41 kDa (CSP41A); FUNCTIONS IN: mRNA binding, poly(U) RNA binding; INVOLVED IN: rRNA processing; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: chloroplast RNA binding (TAIR:AT1G09340.1); Has 1047 Blast hits to 1047 proteins in 372 species: Archae - 70; Bacteria - 649; Metazoa - 6; Fungi - 5; Plants - 106; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|30800 : 84.6) no description available & (reliability: 1168.0) & (original description: Putative csp41, Description = MRNA-binding protein, PFAM = PF01370)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold92387_1-5066' '(at1g70150 : 390.0) zinc ion binding; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893); Has 188 Blast hits to 183 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 69; Fungi - 18; Plants - 88; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 780.0) & (original description: Putative At1g70150, Description = Zinc ion binding protein, PFAM = PF01753)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold96338_1754-4508' '(at1g64260 : 113.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF04434;PF10551)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold97774_1-4162' '(at1g03840 : 285.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative MdZF1, Description = Zinc finger protein, PFAM = PF00096)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold105250_1-3368' '(at1g49920 : 110.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (gnl|cdd|72786 : 100.0) no description available & (reliability: 216.0) & (original description: Putative SDM1_53t00022, Description = Zinc finger containing preotein, putative, PFAM = PF03108;PF10551;PF04434)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.3scaffold106441_1-3304' '(at5g58760 : 358.0) Encodes a DDB1a interacting protein DDB2 required for UV-B tolerance and genomic integrity.; damaged DNA binding 2 (DDB2); FUNCTIONS IN: nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: DNA repair, response to UV-B; LOCATED IN: nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Zinc finger, CCHC-type (InterPro:IPR001878), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: DROUGHT SENSITIVE 1 (TAIR:AT1G80710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39529 : 184.0) no description available & (reliability: 716.0) & (original description: Putative DDB2, Description = Protein DAMAGED DNA-BINDING 2, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold107_623374-635072' '(at1g07705 : 650.0) NOT2 / NOT3 / NOT5 family; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282); BEST Arabidopsis thaliana protein match is: VIRE2 interacting protein 2 (TAIR:AT5G59710.1); Has 3259 Blast hits to 2610 proteins in 429 species: Archae - 0; Bacteria - 983; Metazoa - 821; Fungi - 441; Plants - 185; Viruses - 8; Other Eukaryotes - 821 (source: NCBI BLink). & (gnl|cdd|86562 : 196.0) no description available & (gnl|cdd|37361 : 96.2) no description available & (reliability: 1242.0) & (original description: Putative VIP2, Description = Probable NOT transcription complex subunit VIP2, PFAM = PF04153)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold122_214907-237940' '(at3g04970 : 521.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein with DHHC zinc finger domain (TAIR:AT2G14255.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36526 : 271.0) no description available & (gnl|cdd|34870 : 96.6) no description available & (reliability: 1042.0) & (original description: Putative PAT17, Description = Probable protein S-acyltransferase 17, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold131_851822-854920' '(at4g17900 : 304.0) PLATZ transcription factor family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT1G32700.1); Has 399 Blast hits to 399 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 399; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 188.0) no description available & (reliability: 608.0) & (original description: Putative PLTZ2, Description = PLATZ transcription factor, PFAM = PF04640)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold133_304913-309475' '(at1g03840 : 327.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 608.0) & (original description: Putative ENY, Description = Zinc finger protein MAGPIE, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold283_877439-880212' '(at1g11650 : 146.0) RBP45B; FUNCTIONS IN: RNA binding; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 29660 Blast hits to 18296 proteins in 811 species: Archae - 14; Bacteria - 2273; Metazoa - 15265; Fungi - 3531; Plants - 5870; Viruses - 0; Other Eukaryotes - 2707 (source: NCBI BLink). & (gnl|cdd|35370 : 84.3) no description available & (reliability: 292.0) & (original description: Putative nbp1, Description = Polyadenylate-binding protein RBP47B, PFAM = PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold293_308164-312722' '(at1g21150 : 137.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 922 Blast hits to 791 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 903; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|66247 : 112.0) no description available & (gnl|cdd|36481 : 90.9) no description available & (reliability: 274.0) & (original description: Putative PGSC0003DMG400015070, Description = Putative ovule protein, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold426_486252-498884' '(at2g47850 : 297.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1); Has 1724 Blast hits to 1003 proteins in 159 species: Archae - 0; Bacteria - 7; Metazoa - 368; Fungi - 218; Plants - 971; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (q5naw2|zfnl1_orysa : 225.0) Zinc finger CCCH domain-containing protein ZFN-like 1 - Oryza sativa (Rice) & (gnl|cdd|36890 : 81.9) no description available & (reliability: 594.0) & (original description: Putative C3H35, Description = Zinc finger CCCH domain-containing protein 32, PFAM = PF00642;PF00642;PF00642;PF00642)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold459_326685-338852' '(at4g26000 : 361.0) Encodes a novel Arabidopsis gene encoding a polypeptide with K-homology (KH) RNA-binding modules, which acts on vegetative growth and pistil development. Genetic studies suggest that PEP interacts with element(s) of the CLAVATA signaling pathway.; PEPPER (PEP); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: shoot development, gynoecium development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT3G04610.1); Has 2804 Blast hits to 2065 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 1818; Fungi - 225; Plants - 670; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|37401 : 158.0) no description available & (reliability: 722.0) & (original description: Putative FLK, Description = Poly(RC)-binding-like protein, PFAM = PF00013;PF00013;PF00013)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold509_708876-713444' '(at4g17900 : 313.0) PLATZ transcription factor family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT1G32700.1); Has 399 Blast hits to 399 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 399; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 195.0) no description available & (reliability: 626.0) & (original description: Putative BnaC08g07590D, Description = BnaC08g07590D protein, PFAM = PF04640)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold527_675270-680735' '(at5g64950 : 139.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66247 : 101.0) no description available & (gnl|cdd|36481 : 98.2) no description available & (reliability: 278.0) & (original description: Putative PGSC0003DMG400016579, Description = Putative ovule protein, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold587_232306-238482' '(at1g49920 : 166.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (gnl|cdd|72786 : 81.2) no description available & (reliability: 308.0) & (original description: Putative Os06g0632700, Description = Os06g0632700 protein, PFAM = PF10551;PF00564;PF04434;PF03108)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold684_13548-17896' '(at1g64260 : 105.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold740_492019-499412' '(at5g45550 : 422.0) Mob1/phocein family protein; CONTAINS InterPro DOMAIN/s: Mob1/phocein (InterPro:IPR005301); BEST Arabidopsis thaliana protein match is: Mob1/phocein family protein (TAIR:AT4G19045.1); Has 1269 Blast hits to 1261 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 709; Fungi - 290; Plants - 115; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|35661 : 335.0) no description available & (gnl|cdd|86392 : 257.0) no description available & (reliability: 820.0) & (original description: Putative MOB1A, Description = MOB kinase activator-like 1A, PFAM = PF03637)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold776_173983-182187' '(at1g20110 : 433.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT3G14270.1); Has 29282 Blast hits to 20083 proteins in 828 species: Archae - 11; Bacteria - 1932; Metazoa - 10999; Fungi - 6486; Plants - 4104; Viruses - 590; Other Eukaryotes - 5160 (source: NCBI BLink). & (gnl|cdd|47412 : 89.7) no description available & (reliability: 866.0) & (original description: Putative Sb02g037120, Description = Putative uncharacterized protein Sb02g037120, PFAM = PF01363)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold798_24646-35661' '(p93788|remo_soltu : 98.2) Remorin (pp34) - Solanum tuberosum (Potato) & (at5g23750 : 84.3) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G48940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative DBP, Description = Remorin, PFAM = PF03763)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold904_122565-126679' '(at2g33640 : 221.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT4G15080.1); Has 4820 Blast hits to 4679 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 2062; Fungi - 621; Plants - 835; Viruses - 0; Other Eukaryotes - 1302 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative PAT19, Description = S-acyltransferase, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold914_177327-196303' '(at1g64830 : 263.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G33340.1); Has 3478 Blast hits to 3458 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 661; Fungi - 712; Plants - 1893; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36553 : 165.0) no description available & (reliability: 506.0) & (original description: Putative AP1, Description = Eukaryotic aspartyl protease family protein, PFAM = PF14543)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold1287_119784-130540' '(at5g54310 : 220.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. Regulates membrane trafficking and organ separation.; ARF-GAP domain 5 (AGD5); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: floral organ abscission, activation of ARF GTPase activity; LOCATED IN: cytosol, trans-Golgi network, endosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 15 (TAIR:AT3G17660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35922 : 168.0) no description available & (gnl|cdd|85433 : 146.0) no description available & (reliability: 440.0) & (original description: Putative smap1, Description = ArfGap-domain-containing protein, PFAM = PF01412)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold1293_48480-53658' '(at1g15910 : 494.0) XH/XS domain-containing protein; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379), Domain of unknown function, putative Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT4G00380.1); Has 48628 Blast hits to 29972 proteins in 1836 species: Archae - 567; Bacteria - 5701; Metazoa - 24120; Fungi - 3416; Plants - 1878; Viruses - 163; Other Eukaryotes - 12783 (source: NCBI BLink). & (gnl|cdd|67106 : 166.0) no description available & (reliability: 966.0) & (original description: Putative FDM1, Description = Factor of DNA methylation 1, PFAM = PF03468;PF03469;PF03470)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold1341_19045-28121' '(at3g48670 : 421.0) Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway.; INVOLVED IN DE NOVO 2 (IDN2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion, chromatin silencing, DNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379), Domain of unknown function, putative Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT3G12550.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67105 : 165.0) no description available & (reliability: 758.0) & (original description: Putative FDM3, Description = Putative domain XH, PFAM = PF03469;PF03468;PF03470;PF03470;PF03470;PF03470;PF03470;PF03470;PF03470;PF03470)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold1553_273586-276590' '(at4g00840 : 133.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G60800.1); Has 5117 Blast hits to 5115 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 766; Plants - 830; Viruses - 0; Other Eukaryotes - 1332 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative PAT12, Description = S-acyltransferase, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold1653_122435-127461' '(at3g21100 : 225.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G51520.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative At3g21100, Description = Putative uncharacterized protein At3g21100, PFAM = PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold1703_208059-212313' '(at5g66730 : 273.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 2 (TAIR:AT3G50700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 508.0) & (original description: Putative MdZF1, Description = Zinc finger protein, PFAM = PF00096)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold1745_92086-98613' '(gnl|cdd|36553 : 116.0) no description available & (at5g10760 : 114.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: apoplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G10770.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative PGSC0003DMG400043757, Description = , PFAM = PF14543;PF14541)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold1757_39033-44938' '(at5g06250 : 179.0) AP2/B3-like transcriptional factor family protein; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G11580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85971 : 99.0) no description available & (reliability: 358.0) & (original description: Putative ABI2, Description = B3 DNA-binding domain protein, PFAM = PF02362)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold1895_156554-180562' '(at4g38170 : 536.0) FAR1-related sequence 9 (FRS9); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PMZ-type (InterPro:IPR006564), MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 5 (TAIR:AT4G38180.1); Has 1073 Blast hits to 1051 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 2; Plants - 1067; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1072.0) & (original description: Putative FRS9, Description = Protein FAR1-RELATED SEQUENCE 9, PFAM = PF04434;PF10551)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold1897_250874-259950' '(at3g21810 : 113.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 904 Blast hits to 850 proteins in 161 species: Archae - 9; Bacteria - 40; Metazoa - 431; Fungi - 54; Plants - 83; Viruses - 2; Other Eukaryotes - 285 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative pco137268b, Description = Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform 1, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold1912_15012-20200' '(at3g17611 : 285.0) RHOMBOID-like protein 14 (RBL14); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); Has 157 Blast hits to 157 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 77; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|37843 : 125.0) no description available & (reliability: 570.0) & (original description: Putative RBL14, Description = Rhomboid-like protein 14, mitochondrial, PFAM = PF00641;PF01694)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold1912_371313-379988' '(at4g15080 : 755.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G22180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36525 : 145.0) no description available & (gnl|cdd|65336 : 93.4) no description available & (reliability: 1510.0) & (original description: Putative PAT19, Description = Probable protein S-acyltransferase 19, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2031_369460-374604' '(at5g03500 : 154.0) Mediator complex, subunit Med7; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med7 (InterPro:IPR009244); BEST Arabidopsis thaliana protein match is: Mediator complex, subunit Med7 (TAIR:AT5G03220.1). & (gnl|cdd|35790 : 119.0) no description available & (gnl|cdd|69503 : 112.0) no description available & (reliability: 308.0) & (original description: Putative Med7, Description = Putative Mediator of RNA polymerase II transcription subunit, PFAM = PF05983)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2049_298212-306155' '(at5g56930 : 145.0) embryo defective 1789 (emb1789); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 4013 Blast hits to 1845 proteins in 273 species: Archae - 0; Bacteria - 114; Metazoa - 1017; Fungi - 647; Plants - 283; Viruses - 3; Other Eukaryotes - 1949 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative emb1789, Description = Zinc finger CCCH domain-containing protein 7, PFAM = PF00642)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2091_217467-219988' '(at4g00840 : 81.3) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G60800.1); Has 5117 Blast hits to 5115 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 766; Plants - 830; Viruses - 0; Other Eukaryotes - 1332 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative PAT12, Description = S-acyltransferase, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2253_22060-47481' '(gnl|cdd|72855 : 170.0) no description available & (at5g11470 : 160.0) bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Bromo adjacent homology (BAH) domain (InterPro:IPR001025); BEST Arabidopsis thaliana protein match is: nucleic acid binding (TAIR:AT3G15605.4); Has 602 Blast hits to 478 proteins in 106 species: Archae - 0; Bacteria - 17; Metazoa - 295; Fungi - 38; Plants - 91; Viruses - 4; Other Eukaryotes - 157 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative BnaA03g03350D, Description = Putative ovule protein, PFAM = PF00076;PF01426)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2314_279011-300301' '(at4g20380 : 114.0) LSD1 monitors a superoxide-dependent signal and negatively regulates a plant cell death pathway. contains zinc-finger motifs. LSD1 negatively regulates a basal defense pathway that can act upstream or independently of both NIM1/NPR1 function and SA accumulation following avirulent or virulent pathogen challenge; LSD1 zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 11 processes; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735); BEST Arabidopsis thaliana protein match is: lsd one like 1 (TAIR:AT1G32540.1); Has 317 Blast hits to 247 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 273; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative CHS4, Description = Protein LSD1, PFAM = PF06943;PF06943)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2345_191881-194765' '(at2g34620 : 351.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G03050.1); Has 1033 Blast hits to 730 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 21; Fungi - 0; Plants - 921; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|66247 : 157.0) no description available & (gnl|cdd|36481 : 90.2) no description available & (reliability: 702.0) & (original description: Putative MTERF1, Description = Transcription termination factor MTEF1, chloroplastic, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2625_157747-167296' '(at4g21610 : 110.0) Contains the same novel zinc finger motif with LSD1, a negative regulator of cell death and defense response. Due to differential splicing, it encodes two different proteins, one of which contains an additional, putative DNA binding motif. Northern analysis demonstrated that LOL2 transcripts containing the additional DNA binding motif are predominantly upregulated after treatment with both virulent and avirulent Pseudomonas syringae pv maculicola strains.; lsd one like 2 (LOL2); CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735); BEST Arabidopsis thaliana protein match is: lsd one like 1 (TAIR:AT1G32540.1); Has 291 Blast hits to 191 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 255; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative LOL1, Description = AtLOL1, PFAM = PF06943;PF06943)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2672_222846-228570' '(at1g06770 : 189.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. The DRIP1-GFP fusion protein is nuclear-localized. DRIP1 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 1 (DRIP1); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 2 (TAIR:AT2G30580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative glysoja_002556, Description = E3 ubiquitin protein ligase DRIP2, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2721_108928-132694' '(gnl|cdd|38246 : 168.0) no description available & (gnl|cdd|80055 : 158.0) no description available & (at5g12980 : 156.0) Cell differentiation, Rcd1-like protein; CONTAINS InterPro DOMAIN/s: Cell differentiation, Rcd1-like (InterPro:IPR007216); BEST Arabidopsis thaliana protein match is: Cell differentiation, Rcd1-like protein (TAIR:AT3G20800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative PIM1, Description = Phytochrome interacting molecule 1, PFAM = PF04078;PF04078)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2745_96368-105078' '(at2g20280 : 352.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 6263 Blast hits to 4194 proteins in 354 species: Archae - 14; Bacteria - 176; Metazoa - 2274; Fungi - 740; Plants - 301; Viruses - 209; Other Eukaryotes - 2549 (source: NCBI BLink). & (gnl|cdd|36974 : 249.0) no description available & (gnl|cdd|34849 : 149.0) no description available & (reliability: 704.0) & (original description: Putative dfrp1, Description = Translation machinery-associated protein 46, PFAM = PF16543)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2849_71770-80211' '(at5g56930 : 134.0) embryo defective 1789 (emb1789); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 4013 Blast hits to 1845 proteins in 273 species: Archae - 0; Bacteria - 114; Metazoa - 1017; Fungi - 647; Plants - 283; Viruses - 3; Other Eukaryotes - 1949 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative emb1789, Description = Zinc finger CCCH domain-containing protein 7, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2904_3626-13785' '(at1g64260 : 146.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 100.0) no description available & (reliability: 292.0) & (original description: Putative At3g04605, Description = Putative muDR family transposase-like, PFAM = PF04434;PF10551;PF03108;PF00564)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2922_18534-28438' '(at5g13240 : 333.0) transcription regulators; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: negative regulation of transcription from RNA polymerase III promoter; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Maf1 regulator (InterPro:IPR015257), RNA polymerase III transcriptional repressor, MAF1 (InterPro:IPR017152); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72591 : 170.0) no description available & (gnl|cdd|38314 : 157.0) no description available & (reliability: 666.0) & (original description: Putative MAF1, Description = Repressor of RNA polymerase III transcription, PFAM = PF09174)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold2990_162637-166028' '(gnl|cdd|39379 : 127.0) no description available & (gnl|cdd|29261 : 106.0) no description available & (at2g03430 : 93.2) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat protein (TAIR:AT5G66055.1); Has 130068 Blast hits to 38689 proteins in 1585 species: Archae - 162; Bacteria - 14649; Metazoa - 59864; Fungi - 13189; Plants - 7735; Viruses - 2061; Other Eukaryotes - 32408 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 82.8) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 173.4) & (original description: Putative Vpyl, Description = Ankyrin repeat, PH and SEC7 domain secG-like protein, PFAM = PF12796;PF12796;PF12796)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold3000_230926-233855' '(at2g36000 : 227.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G34620.1); Has 802 Blast hits to 604 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 0; Plants - 717; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|66247 : 114.0) no description available & (gnl|cdd|36481 : 89.0) no description available & (reliability: 454.0) & (original description: Putative BnaA03g16480D, Description = BnaA03g16480D protein, PFAM = PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold3000_230974-233858' '(at2g36000 : 223.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G34620.1); Has 802 Blast hits to 604 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 0; Plants - 717; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|66247 : 112.0) no description available & (gnl|cdd|36481 : 87.1) no description available & (reliability: 446.0) & (original description: Putative At2g36000, Description = Mitochondrial transcription termination factor, PFAM = PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold3211_287579-291853' '(at4g20380 : 154.0) LSD1 monitors a superoxide-dependent signal and negatively regulates a plant cell death pathway. contains zinc-finger motifs. LSD1 negatively regulates a basal defense pathway that can act upstream or independently of both NIM1/NPR1 function and SA accumulation following avirulent or virulent pathogen challenge; LSD1 zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 11 processes; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735); BEST Arabidopsis thaliana protein match is: lsd one like 1 (TAIR:AT1G32540.1); Has 317 Blast hits to 247 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 273; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative LOL2, Description = Protein LOL2, PFAM = PF06943;PF06943;PF06943)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold3435_34313-39783' '(at5g40660 : 135.0) ATP12 protein-related; INVOLVED IN: proton-transporting ATP synthase complex assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP12, ATPase F1F0-assembly protein (InterPro:IPR011419); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38225 : 120.0) no description available & (reliability: 270.0) & (original description: Putative At5g40660, Description = Putative ovule protein, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold3459_110-6529' '(at1g09920 : 236.0) TRAF-type zinc finger-related; BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT4G15420.1); Has 897 Blast hits to 860 proteins in 162 species: Archae - 0; Bacteria - 0; Metazoa - 570; Fungi - 106; Plants - 68; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative BnaC05g07400D, Description = BnaC05g07400D protein, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold3871_202969-206084' '(at5g64950 : 151.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36481 : 107.0) no description available & (gnl|cdd|66247 : 98.5) no description available & (reliability: 302.0) & (original description: Putative PGSC0003DMG400027538, Description = Putative ovule protein, PFAM = PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold4004_70285-79832' '(at5g19350 : 389.0) RNA-binding (RRM/RBD/RNP motifs) family protein; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 29846 Blast hits to 17541 proteins in 840 species: Archae - 12; Bacteria - 2412; Metazoa - 15092; Fungi - 3490; Plants - 6065; Viruses - 0; Other Eukaryotes - 2775 (source: NCBI BLink). & (gnl|cdd|35370 : 135.0) no description available & (gnl|cdd|31068 : 91.3) no description available & (reliability: 778.0) & (original description: Putative nbp1, Description = Polyadenylate-binding protein RBP47B, PFAM = PF00076;PF00076;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold4495_56415-59122' '(at5g59550 : 84.7) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Protein of unknown function DUF1117 (InterPro:IPR010543); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G46620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative PGSC0003DMG400018972, Description = E3 ubiquitin-protein ligase RING1-like protein, PFAM = PF13639)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold4577_36428-55032' '(at2g45640 : 179.0) Involved in the regulation of salt stress. Expression of AtSAP18 is induced by NaCl, cold, drought, ABA, and ethylene treatment. AtSAP18 and HDA19 associate with ERF3 and ERF4 both in vitro and in vivo.; SIN3 associated polypeptide P18 (SAP18); FUNCTIONS IN: protein binding, transcription regulator activity; INVOLVED IN: response to salt stress, response to abscisic acid stimulus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sin3 associated polypeptide p18 (InterPro:IPR010516), Histone deacetylase complex, SAP18 subunit (InterPro:IPR017250). & (gnl|cdd|87099 : 168.0) no description available & (gnl|cdd|38601 : 145.0) no description available & (reliability: 358.0) & (original description: Putative At2g45640, Description = Histone deacetylase complex subunit SAP18, PFAM = PF06487)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold5540_44769-49916' '(at3g56330 : 428.0) N2,N2-dimethylguanosine tRNA methyltransferase; FUNCTIONS IN: RNA binding, tRNA (guanine-N2-)-methyltransferase activity; INVOLVED IN: tRNA processing; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: N2,N2-dimethylguanosine tRNA methyltransferase (InterPro:IPR002905); BEST Arabidopsis thaliana protein match is: N2,N2-dimethylguanosine tRNA methyltransferase (TAIR:AT5G15810.1); Has 951 Blast hits to 937 proteins in 347 species: Archae - 257; Bacteria - 66; Metazoa - 191; Fungi - 140; Plants - 103; Viruses - 0; Other Eukaryotes - 194 (source: NCBI BLink). & (gnl|cdd|36467 : 232.0) no description available & (gnl|cdd|32052 : 195.0) no description available & (reliability: 856.0) & (original description: Putative trm1, Description = tRNA (Guanine26-N2/guanine27-N2)-dimethyltransferase Trm1, PFAM = PF02005)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold5619_1-4220' '(at1g74120 : 369.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 15 (TAIR:AT5G54180.1); Has 926 Blast hits to 761 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 29; Fungi - 0; Plants - 888; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 738.0) & (original description: Putative MTERF15, Description = Transcription termination factor MTERF15, mitochondrial, PFAM = PF02536;PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold5661_10539-19686' '(at5g54310 : 368.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. Regulates membrane trafficking and organ separation.; ARF-GAP domain 5 (AGD5); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: floral organ abscission, activation of ARF GTPase activity; LOCATED IN: cytosol, trans-Golgi network, endosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 15 (TAIR:AT3G17660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35922 : 188.0) no description available & (gnl|cdd|85433 : 157.0) no description available & (reliability: 736.0) & (original description: Putative AGD5, Description = Probable ADP-ribosylation factor GTPase-activating protein AGD5, PFAM = PF01412)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold6181_34923-54861' '(at1g43850 : 488.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 976.0) & (original description: Putative SEU, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold6271_102552-106963' '(at5g07030 : 486.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G54400.1); Has 3400 Blast hits to 3386 proteins in 327 species: Archae - 0; Bacteria - 0; Metazoa - 917; Fungi - 461; Plants - 1890; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|36553 : 193.0) no description available & (reliability: 932.0) & (original description: Putative BnaA09g34280D, Description = BnaA09g34280D protein, PFAM = PF14543;PF14541)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold6403_70124-74073' '(at1g49920 : 96.7) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative , Description = Putative ovule protein, PFAM = PF04434;PF10551)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold6764_44495-54435' '(at5g56900 : 597.0) CwfJ-like family protein / zinc finger (CCCH-type) family protein; FUNCTIONS IN: zinc ion binding, catalytic activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Histidine triad-like motif (InterPro:IPR011146), Cwf19-like, C-terminal domain-1 (InterPro:IPR006768), Cwf19-like protein, C-terminal domain-2 (InterPro:IPR006767); BEST Arabidopsis thaliana protein match is: CwfJ-like family protein (TAIR:AT1G56290.1); Has 929 Blast hits to 786 proteins in 187 species: Archae - 0; Bacteria - 11; Metazoa - 341; Fungi - 367; Plants - 103; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|37687 : 400.0) no description available & (gnl|cdd|86708 : 131.0) no description available & (reliability: 1194.0) & (original description: Putative At5g56900, Description = Putative ovule protein, PFAM = PF04677;PF04676)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold6919_11400-24219' '(at5g16680 : 355.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT3G02890.1); Has 6870 Blast hits to 4822 proteins in 413 species: Archae - 8; Bacteria - 605; Metazoa - 3213; Fungi - 704; Plants - 729; Viruses - 19; Other Eukaryotes - 1592 (source: NCBI BLink). & (reliability: 710.0) & (original description: Putative BnaAnng12780D, Description = Tyrosine-protein kinase BAZ1B, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold7257_15598-18305' '(p27484|grp2_nicsy : 102.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at4g38680 : 92.8) Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development.; glycine rich protein 2 (GRP2); FUNCTIONS IN: double-stranded DNA binding, mRNA binding, single-stranded DNA binding, nucleic acid binding; INVOLVED IN: stamen development, vegetative to reproductive phase transition of meristem, response to cold, seed development, DNA duplex unwinding; LOCATED IN: nucleolus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 37 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold shock protein (InterPro:IPR011129), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine-rich protein 2B (TAIR:AT2G21060.1); Has 150401 Blast hits to 55289 proteins in 3379 species: Archae - 285; Bacteria - 51625; Metazoa - 48133; Fungi - 9113; Plants - 13783; Viruses - 1771; Other Eukaryotes - 25691 (source: NCBI BLink). & (gnl|cdd|84686 : 84.5) no description available & (reliability: 174.0) & (original description: Putative nab1, Description = Glycine-rich protein 2, PFAM = PF00313;PF00098)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold7303_41785-51047' '(at4g22140 : 314.0) EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72854 : 137.0) no description available & (gnl|cdd|37097 : 124.0) no description available & (reliability: 606.0) & (original description: Putative SHL, Description = Chromatin remodeling protein SHL, PFAM = PF00628;PF01426)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold8112_9088-16352' '(at3g26935 : 568.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G41060.1); Has 5153 Blast hits to 5144 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 2200; Fungi - 770; Plants - 850; Viruses - 0; Other Eukaryotes - 1333 (source: NCBI BLink). & (gnl|cdd|36525 : 234.0) no description available & (gnl|cdd|34870 : 132.0) no description available & (reliability: 1136.0) & (original description: Putative PAT07, Description = Probable protein S-acyltransferase 7, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold8202_23412-27704' '(at1g01160 : 85.9) Arabidopsis thaliana GRF1-interacting factor 2 (GIF2) mRNA; GRF1-interacting factor 2 (GIF2); FUNCTIONS IN: protein binding, transcription coactivator activity; INVOLVED IN: cell proliferation, leaf development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SSXT (InterPro:IPR007726); BEST Arabidopsis thaliana protein match is: GRF1-interacting factor 3 (TAIR:AT4G00850.1); Has 35 Blast hits to 35 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 5; Plants - 17; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative AN3, Description = AtGIF1, PFAM = PF05030)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold8233_4343-7877' '(at1g01300 : 556.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis, response to karrikin; LOCATED IN: membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G61820.1); Has 3898 Blast hits to 3871 proteins in 332 species: Archae - 0; Bacteria - 0; Metazoa - 1165; Fungi - 579; Plants - 1953; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (gnl|cdd|36553 : 266.0) no description available & (gnl|cdd|84452 : 107.0) no description available & (reliability: 1026.0) & (original description: Putative APF2, Description = Aspartyl protease family protein 2, PFAM = PF14543;PF14541)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold8595_1433-9334' '(p82277|rrp2_spiol : 265.0) Plastid-specific 30S ribosomal protein 2, chloroplast precursor (PSRP-2) - Spinacia oleracea (Spinach) & (at3g52150 : 259.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 33 (TAIR:AT3G52380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35346 : 90.2) no description available & (reliability: 518.0) & (original description: Putative At3g52150, Description = Putative uncharacterized protein At3g52150, PFAM = PF00076;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold9022_896-4143' '(at2g02080 : 253.0) indeterminate(ID)-domain 4 (IDD4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT1G14580.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative IDD4, Description = Zinc finger protein MAGPIE, PFAM = PF12171)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'nbv0.5scaffold9138_1754-5916' '(at1g64260 : 121.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF03108;PF10551;PF04434)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00000877ctg015_1162-8177' '(at2g32080 : 419.0) similar to the conserved animal nuclear protein PUR alpha which was implicated in the control of gene transcription and DNA replication; purin-rich alpha 1 (PUR ALPHA-1); FUNCTIONS IN: nucleic acid binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PUR-alpha/beta/gamma, DNA/RNA-binding (InterPro:IPR006628); Has 588 Blast hits to 332 proteins in 74 species: Archae - 0; Bacteria - 31; Metazoa - 438; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|38284 : 214.0) no description available & (gnl|cdd|68420 : 105.0) no description available & (reliability: 838.0) & (original description: Putative PURA1, Description = Transcription factor Pur-alpha 1, PFAM = PF04845;PF04845)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00001096ctg028_25353-29915' '(at1g03840 : 327.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 608.0) & (original description: Putative ENY, Description = Zinc finger protein MAGPIE, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00001384ctg018_15388-20162' '(at3g54826 : 156.0) Zim17-type zinc finger protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Zim17-type (InterPro:IPR007853); Has 403 Blast hits to 403 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 114; Fungi - 127; Plants - 101; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|38487 : 90.9) no description available & (gnl|cdd|72806 : 81.9) no description available & (reliability: 312.0) & (original description: Putative Os02g0819700, Description = Os02g0819700 protein, PFAM = PF05180)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00002208ctg002_1997-4650' '(at5g56930 : 94.7) embryo defective 1789 (emb1789); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 4013 Blast hits to 1845 proteins in 273 species: Archae - 0; Bacteria - 114; Metazoa - 1017; Fungi - 647; Plants - 283; Viruses - 3; Other Eukaryotes - 1949 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative PGSC0003DMG400014565, Description = Zinc finger CCCH domain-containing protein 7, PFAM = PF00642)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00003381ctg002_2101-11357' '(at2g41835 : 317.0) zinc finger (C2H2 type, AN1-like) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type, AN1-like) family protein (TAIR:AT3G57480.1); Has 760 Blast hits to 744 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 485; Fungi - 122; Plants - 83; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|38393 : 172.0) no description available & (reliability: 634.0) & (original description: Putative SAP11, Description = Zinc finger AN1 and C2H2 domain-containing stress-associated protein 11, PFAM = PF01428;PF01428)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00003483ctg005_442-5356' '(at1g04500 : 172.0) CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT2G33350.2); Has 1789 Blast hits to 1789 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 2; Plants - 1654; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|87043 : 84.9) no description available & (reliability: 344.0) & (original description: Putative COL9, Description = CCT motif family protein, PFAM = PF06203)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00004133ctg003_875-4440' '(at5g06250 : 184.0) AP2/B3-like transcriptional factor family protein; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G11580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85971 : 100.0) no description available & (reliability: 368.0) & (original description: Putative ARF31, Description = B3 domain-containing protein At2g36080, PFAM = PF02362)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00004376ctg001_1-12378' '(at5g03500 : 185.0) Mediator complex, subunit Med7; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med7 (InterPro:IPR009244); BEST Arabidopsis thaliana protein match is: Mediator complex, subunit Med7 (TAIR:AT5G03220.1). & (gnl|cdd|35790 : 144.0) no description available & (gnl|cdd|69503 : 134.0) no description available & (reliability: 370.0) & (original description: Putative med7, Description = Putative mediator complex subunit 7, PFAM = PF05983)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00004829ctg009_2555-5178' '(p27484|grp2_nicsy : 129.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at2g21060 : 97.4) glycine-rich protein (AtGRP2b); glycine-rich protein 2B (GRP2B); FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Cold shock protein (InterPro:IPR011129), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine rich protein 2 (TAIR:AT4G38680.1); Has 124576 Blast hits to 52040 proteins in 3306 species: Archae - 178; Bacteria - 46955; Metazoa - 35565; Fungi - 6939; Plants - 11254; Viruses - 1676; Other Eukaryotes - 22009 (source: NCBI BLink). & (gnl|cdd|36139 : 87.3) no description available & (gnl|cdd|84686 : 81.8) no description available & (reliability: 191.8) & (original description: Putative nab1, Description = Glycine-rich protein 2, PFAM = PF00098;PF00313)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00005580ctg002_14020-19424' '(at3g51950 : 230.0) Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G63450.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative Os03g0328900, Description = Zinc finger CCCH domain-containing protein 22, PFAM = PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00005768ctg000_1155-4267' '(at1g21150 : 106.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 922 Blast hits to 791 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 903; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|66247 : 81.9) no description available & (reliability: 212.0) & (original description: Putative PGSC0003DMG400031415, Description = Putative ovule protein, PFAM = PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00005769ctg013_1-5695' '(at1g65260 : 352.0) Encodes a protein required for thylakoid membrane formation.; plastid transcriptionally active 4 (PTAC4); INVOLVED IN: vesicle organization, thylakoid membrane organization; LOCATED IN: in 8 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PspA/IM30 (InterPro:IPR007157); Has 3123 Blast hits to 3108 proteins in 1139 species: Archae - 38; Bacteria - 2412; Metazoa - 160; Fungi - 68; Plants - 89; Viruses - 95; Other Eukaryotes - 261 (source: NCBI BLink). & (q03943|im30_pea : 346.0) Membrane-associated 30 kDa protein, chloroplast precursor (M30) - Pisum sativum (Garden pea) & (gnl|cdd|32027 : 128.0) no description available & (reliability: 704.0) & (original description: Putative IM30, Description = Membrane-associated 30 kDa protein, chloroplastic, PFAM = PF04012)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00005931ctg003_8396-18210' '(at3g48440 : 312.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G63260.1); Has 1758 Blast hits to 1034 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 389; Fungi - 243; Plants - 962; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (q5jlb5|zfnl2_orysa : 206.0) Zinc finger CCCH domain-containing protein ZFN-like 2 - Oryza sativa (Rice) & (gnl|cdd|36890 : 103.0) no description available & (reliability: 624.0) & (original description: Putative PGSC0003DMG400015168, Description = Zinc finger CCCH domain-containing protein 43, PFAM = PF14608;PF00642;PF00642;PF00642;PF00642)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00005969ctg015_1-4018' '(at3g06660 : 149.0) PAPA-1-like family protein / zinc finger (HIT type) family protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, HIT-type (InterPro:IPR007529), PAPA-1-like conserved region (InterPro:IPR006880); BEST Arabidopsis thaliana protein match is: HIT zinc finger ;PAPA-1-like conserved region (TAIR:AT2G47350.1); Has 668 Blast hits to 539 proteins in 161 species: Archae - 0; Bacteria - 83; Metazoa - 198; Fungi - 84; Plants - 88; Viruses - 0; Other Eukaryotes - 215 (source: NCBI BLink). & (gnl|cdd|68370 : 98.6) no description available & (reliability: 298.0) & (original description: Putative BnaC09g07650D, Description = BnaC09g07650D protein, PFAM = PF04795;PF04438)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00006054ctg001_475-4774' '(at5g66730 : 291.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 2 (TAIR:AT3G50700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative IDD1, Description = Protein indeterminate-domain 1, PFAM = PF00096)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00006149ctg005_12924-16342' '(gnl|cdd|39379 : 125.0) no description available & (gnl|cdd|29261 : 105.0) no description available & (at2g03430 : 91.3) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat protein (TAIR:AT5G66055.1); Has 130068 Blast hits to 38689 proteins in 1585 species: Archae - 162; Bacteria - 14649; Metazoa - 59864; Fungi - 13189; Plants - 7735; Viruses - 2061; Other Eukaryotes - 32408 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 83.2) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 174.8) & (original description: Putative Vpyl, Description = Ankyrin repeat, PH and SEC7 domain secG-like protein, PFAM = PF12796;PF12796;PF13637)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00006248ctg002_2070-6387' '(at5g66730 : 278.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 2 (TAIR:AT3G50700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 512.0) & (original description: Putative MdZF1, Description = Zinc finger protein, PFAM = PF00096)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00006413ctg010_1-3168' '(at3g04570 : 202.0) AT-hook motif nuclear-localized protein 19 (AHL19); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 20 (TAIR:AT4G14465.1); Has 7030 Blast hits to 3903 proteins in 396 species: Archae - 17; Bacteria - 3505; Metazoa - 1173; Fungi - 108; Plants - 1514; Viruses - 84; Other Eukaryotes - 629 (source: NCBI BLink). & (gnl|cdd|86345 : 131.0) no description available & (reliability: 404.0) & (original description: Putative AHL20, Description = AT-hook motif nuclear-localized protein 20, PFAM = PF03479)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00008017ctg012_13360-23634' '(at5g36740 : 491.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956), A.T hook-like (InterPro:IPR020478), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G36670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 982.0) & (original description: Putative IDM1, Description = Chromodomain-helicase-DNA-binding protein 4, PFAM = PF00628;PF16135)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00008076ctg012_2093-6871' '(at1g23750 : 171.0) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT1G10590.2); Has 249 Blast hits to 249 proteins in 61 species: Archae - 55; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative ino1, Description = DNA-binding family protein, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00008590ctg000_1-8786' '(at3g21810 : 120.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 904 Blast hits to 850 proteins in 161 species: Archae - 9; Bacteria - 40; Metazoa - 431; Fungi - 54; Plants - 83; Viruses - 2; Other Eukaryotes - 285 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative pco137268b, Description = Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform 1, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00009819ctg006_1-6400' '(at3g19130 : 400.0) RNA-binding protein 47B (RBP47B); FUNCTIONS IN: RNA binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47A (TAIR:AT1G49600.1); Has 37628 Blast hits to 21966 proteins in 866 species: Archae - 14; Bacteria - 2376; Metazoa - 18486; Fungi - 4600; Plants - 6856; Viruses - 8; Other Eukaryotes - 5288 (source: NCBI BLink). & (gnl|cdd|35370 : 125.0) no description available & (gnl|cdd|31068 : 87.0) no description available & (p19683|roc4_nicsy : 82.4) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 766.0) & (original description: Putative RBP47, Description = Polyadenylate-binding protein RBP47, PFAM = PF00076;PF00076;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00010287ctg009_16890-22505' '(at3g09320 : 394.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G04270.1); Has 5137 Blast hits to 5129 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2212; Fungi - 755; Plants - 839; Viruses - 0; Other Eukaryotes - 1331 (source: NCBI BLink). & (gnl|cdd|36529 : 210.0) no description available & (gnl|cdd|34870 : 112.0) no description available & (reliability: 788.0) & (original description: Putative PAT16, Description = Probable protein S-acyltransferase 16, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00010380ctg013_13513-17386' '(at2g39380 : 506.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H2 (EXO70H2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: leaf apex, hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H1 (TAIR:AT3G55150.1); Has 836 Blast hits to 829 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 44; Plants - 635; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|86233 : 492.0) no description available & (gnl|cdd|37555 : 490.0) no description available & (reliability: 1006.0) & (original description: Putative EXO70H2, Description = Exocyst subunit exo70 family protein H2, PFAM = PF03081)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00010399ctg010_9306-12286' '(at2g37550 : 325.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ARF-GAP domain 7 (AGD7); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 6 (TAIR:AT3G53710.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35923 : 231.0) no description available & (gnl|cdd|85433 : 143.0) no description available & (reliability: 640.0) & (original description: Putative v1g26599, Description = Predicted protein, PFAM = PF01412)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00010620ctg000_1-5450' '(at3g26935 : 624.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G41060.1); Has 5153 Blast hits to 5144 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 2200; Fungi - 770; Plants - 850; Viruses - 0; Other Eukaryotes - 1333 (source: NCBI BLink). & (gnl|cdd|36525 : 253.0) no description available & (gnl|cdd|34870 : 138.0) no description available & (reliability: 1248.0) & (original description: Putative PAT07, Description = Probable protein S-acyltransferase 7, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00010662ctg008_3665-8521' '(gnl|cdd|38246 : 178.0) no description available & (at3g20800 : 162.0) Cell differentiation, Rcd1-like protein; CONTAINS InterPro DOMAIN/s: Cell differentiation, Rcd1-like (InterPro:IPR007216); BEST Arabidopsis thaliana protein match is: Cell differentiation, Rcd1-like protein (TAIR:AT5G12980.1); Has 491 Blast hits to 488 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 160; Fungi - 135; Plants - 110; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|80055 : 162.0) no description available & (reliability: 324.0) & (original description: Putative CDP1, Description = Cell differentiation protein rcd1, PFAM = PF04078)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00011335ctg004_13705-24184' '(at1g43850 : 473.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 946.0) & (original description: Putative SEU, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00011865ctg008_3527-9582' '(at1g23750 : 134.0) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT1G10590.2); Has 249 Blast hits to 249 proteins in 61 species: Archae - 55; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative At1g10590, Description = DNA-binding family protein, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00012077ctg012_1-1924' '(at1g64830 : 259.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G33340.1); Has 3478 Blast hits to 3458 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 661; Fungi - 712; Plants - 1893; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36553 : 193.0) no description available & (gnl|cdd|84452 : 83.0) no description available & (reliability: 508.0) & (original description: Putative BnaA08g07350D, Description = BnaA08g07350D protein, PFAM = PF14543;PF14541)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00012383ctg000_2764-6955' '(at1g49920 : 101.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551;PF04434)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00012660ctg006_1-3753' '(at5g58470 : 158.0) TBP-associated factor 15B (TAF15b); FUNCTIONS IN: binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: TBP-associated factor 15 (TAIR:AT1G50300.1); Has 115051 Blast hits to 45140 proteins in 2321 species: Archae - 166; Bacteria - 28654; Metazoa - 42717; Fungi - 9006; Plants - 12716; Viruses - 1451; Other Eukaryotes - 20341 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative BnaAnng16380D, Description = BnaAnng16380D protein, PFAM = PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00013637ctg009_1968-6327' '(at4g02220 : 456.0) zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Programmed cell death protein 2, C-terminal (InterPro:IPR007320), Zinc finger, MYND-type (InterPro:IPR002893); BEST Arabidopsis thaliana protein match is: programmed cell death 2 C-terminal domain-containing protein (TAIR:AT5G64830.1); Has 934 Blast hits to 894 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 394; Fungi - 162; Plants - 228; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|37272 : 265.0) no description available & (gnl|cdd|67794 : 102.0) no description available & (reliability: 912.0) & (original description: Putative pdcd2, Description = Programmed cell death protein 2, PFAM = PF01753;PF04194)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00014124ctg003_1-4847' '(at4g24630 : 472.0) DHHC-type zinc finger family protein; FUNCTIONS IN: receptor activity, zinc ion binding; INVOLVED IN: multicellular organismal development; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Plexin-like fold (InterPro:IPR016201); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G50020.2); Has 5142 Blast hits to 5136 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 2201; Fungi - 738; Plants - 841; Viruses - 0; Other Eukaryotes - 1362 (source: NCBI BLink). & (gnl|cdd|36525 : 229.0) no description available & (gnl|cdd|34870 : 128.0) no description available & (reliability: 944.0) & (original description: Putative PAT08, Description = Protein S-acyltransferase 8, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00014695ctg011_8250-12176' '(at4g02990 : 658.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G44020.1); Has 1500 Blast hits to 957 proteins in 84 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 3; Plants - 1315; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|66247 : 295.0) no description available & (gnl|cdd|36481 : 154.0) no description available & (reliability: 1316.0) & (original description: Putative MTERF4, Description = Transcription termination factor MTERF4, chloroplastic, PFAM = PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00016215ctg012_1-3019' '(at2g14255 : 259.0) Ankyrin repeat family protein with DHHC zinc finger domain; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein with DHHC zinc finger domain (TAIR:AT5G20350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34870 : 105.0) no description available & (gnl|cdd|36525 : 101.0) no description available & (reliability: 518.0) & (original description: Putative TIP1, Description = S-acyltransferase, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00016791ctg002_30796-33891' '(at4g38160 : 434.0) pigment defective 191 (pde191); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G21710.1). & (gnl|cdd|36481 : 130.0) no description available & (gnl|cdd|66247 : 126.0) no description available & (reliability: 868.0) & (original description: Putative MTERF6, Description = Transcription termination factor MTERF6, chloroplastic/mitochondrial, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00017061ctg005_2298-6245' '(at5g06810 : 435.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT4G19650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 870.0) & (original description: Putative BnaC09g32350D, Description = BnaC09g32350D protein, PFAM = PF02536;PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00017084ctg001_7384-11862' '(at4g17900 : 333.0) PLATZ transcription factor family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT1G32700.1); Has 399 Blast hits to 399 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 399; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 193.0) no description available & (reliability: 666.0) & (original description: Putative PLTZ2, Description = PLATZ transcription factor, PFAM = PF04640)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00017675ctg008_4978-11210' '(at2g41835 : 308.0) zinc finger (C2H2 type, AN1-like) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type, AN1-like) family protein (TAIR:AT3G57480.1); Has 760 Blast hits to 744 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 485; Fungi - 122; Plants - 83; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|38393 : 166.0) no description available & (reliability: 616.0) & (original description: Putative SEF2, Description = Somatic embryogenesis zinc finger 2, PFAM = PF01428;PF01428)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00018899ctg007_5607-9169' '(at3g62130 : 610.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT5G26600.1); Has 4302 Blast hits to 4302 proteins in 1284 species: Archae - 105; Bacteria - 2583; Metazoa - 32; Fungi - 216; Plants - 120; Viruses - 0; Other Eukaryotes - 1246 (source: NCBI BLink). & (gnl|cdd|36762 : 318.0) no description available & (gnl|cdd|30866 : 120.0) no description available & (reliability: 1220.0) & (original description: Putative LCD, Description = L-cysteine desulfhydrase, PFAM = PF00266)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00019172ctg003_3725-7014' '(at5g37540 : 522.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G66180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36553 : 200.0) no description available & (reliability: 1044.0) & (original description: Putative At1g66180, Description = Putative ovule protein, PFAM = PF14541;PF14543)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00019316ctg006_4290-8035' '(at5g13150 : 542.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein C1 (EXO70C1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein C2 (TAIR:AT5G13990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37555 : 443.0) no description available & (gnl|cdd|86233 : 336.0) no description available & (reliability: 1084.0) & (original description: Putative BnaA03g04210D, Description = BnaA03g04210D protein, PFAM = PF03081)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00020633ctg008_4421-8041' '(at3g58130 : 160.0) N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: N-acetylglucosaminyl phosphatidylinositol deacetylase (InterPro:IPR003737); BEST Arabidopsis thaliana protein match is: N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein (TAIR:AT2G27340.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38542 : 121.0) no description available & (reliability: 320.0) & (original description: Putative BnaA09g37280D, Description = Putative N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00021556ctg045_3203-8555' '(at2g02160 : 300.0) CCCH-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 10885 Blast hits to 7444 proteins in 511 species: Archae - 23; Bacteria - 415; Metazoa - 5228; Fungi - 922; Plants - 581; Viruses - 184; Other Eukaryotes - 3532 (source: NCBI BLink). & (gnl|cdd|39988 : 176.0) no description available & (reliability: 600.0) & (original description: Putative At2g02160, Description = Zinc finger CCCH domain-containing protein 17, PFAM = PF15663;PF00642)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00022374ctg002_447-4184' '(at2g14255 : 268.0) Ankyrin repeat family protein with DHHC zinc finger domain; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein with DHHC zinc finger domain (TAIR:AT5G20350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34870 : 101.0) no description available & (gnl|cdd|36525 : 97.6) no description available & (reliability: 536.0) & (original description: Putative PIGV, Description = S-acyltransferase, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00022632ctg016_1465-5745' '(p93788|remo_soltu : 162.0) Remorin (pp34) - Solanum tuberosum (Potato) & (at3g48940 : 126.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT5G23750.2); Has 1837 Blast hits to 1261 proteins in 238 species: Archae - 1; Bacteria - 261; Metazoa - 152; Fungi - 115; Plants - 477; Viruses - 0; Other Eukaryotes - 831 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative DBP, Description = Remorin, PFAM = PF03763;PF03766)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00023298ctg002_1821-6913' '(at5g40660 : 363.0) ATP12 protein-related; INVOLVED IN: proton-transporting ATP synthase complex assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP12, ATPase F1F0-assembly protein (InterPro:IPR011419); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38225 : 255.0) no description available & (gnl|cdd|70990 : 143.0) no description available & (reliability: 726.0) & (original description: Putative Sb02g041060, Description = Putative uncharacterized protein Sb02g041060, PFAM = PF07542)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00023656ctg004_17699-23588' '(at1g30320 : 285.0) Remorin family protein; FUNCTIONS IN: DNA binding; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT2G02170.2); Has 12397 Blast hits to 7447 proteins in 1066 species: Archae - 25; Bacteria - 2897; Metazoa - 2750; Fungi - 978; Plants - 862; Viruses - 38; Other Eukaryotes - 4847 (source: NCBI BLink). & (gnl|cdd|67381 : 100.0) no description available & (reliability: 570.0) & (original description: Putative BnaC03g59630D, Description = BnaC03g59630D protein, PFAM = PF03763)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00024269ctg006_3282-7291' '(at2g20280 : 157.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 6263 Blast hits to 4194 proteins in 354 species: Archae - 14; Bacteria - 176; Metazoa - 2274; Fungi - 740; Plants - 301; Viruses - 209; Other Eukaryotes - 2549 (source: NCBI BLink). & (gnl|cdd|36974 : 132.0) no description available & (gnl|cdd|34849 : 84.5) no description available & (reliability: 314.0) & (original description: Putative 22194, Description = Zinc finger CCCH domain-containing protein 11, PFAM = PF16543)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00025209ctg010_565-6299' '(at1g11650 : 297.0) RBP45B; FUNCTIONS IN: RNA binding; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 29660 Blast hits to 18296 proteins in 811 species: Archae - 14; Bacteria - 2273; Metazoa - 15265; Fungi - 3531; Plants - 5870; Viruses - 0; Other Eukaryotes - 2707 (source: NCBI BLink). & (gnl|cdd|35353 : 89.6) no description available & (p28644|roc1_spiol : 85.5) 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) & (reliability: 594.0) & (original description: Putative dbdA, Description = Polyadenylate-binding protein RBP47B, PFAM = PF00076;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00025873ctg002_1-8124' '(at5g16680 : 337.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT3G02890.1); Has 6870 Blast hits to 4822 proteins in 413 species: Archae - 8; Bacteria - 605; Metazoa - 3213; Fungi - 704; Plants - 729; Viruses - 19; Other Eukaryotes - 1592 (source: NCBI BLink). & (reliability: 674.0) & (original description: Putative BnaAnng12780D, Description = Tyrosine-protein kinase BAZ1B, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00025970ctg000_1260-7430' '(at4g00840 : 268.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G60800.1); Has 5117 Blast hits to 5115 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 766; Plants - 830; Viruses - 0; Other Eukaryotes - 1332 (source: NCBI BLink). & (gnl|cdd|36529 : 202.0) no description available & (gnl|cdd|34870 : 116.0) no description available & (reliability: 536.0) & (original description: Putative PAT12, Description = Probable protein S-acyltransferase 12, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00025992ctg001_7344-21410' '(gnl|cdd|72855 : 205.0) no description available & (at5g11470 : 197.0) bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Bromo adjacent homology (BAH) domain (InterPro:IPR001025); BEST Arabidopsis thaliana protein match is: nucleic acid binding (TAIR:AT3G15605.4); Has 602 Blast hits to 478 proteins in 106 species: Archae - 0; Bacteria - 17; Metazoa - 295; Fungi - 38; Plants - 91; Viruses - 4; Other Eukaryotes - 157 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative pco136762b, Description = Bromo-adjacent-like (BAH) domain protein, PFAM = PF01426)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00027690ctg010_8472-14321' '(at2g39830 : 606.0) DA1-related protein 2 (DAR2); FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: LIM domain-containing protein (TAIR:AT4G36860.1); Has 1539 Blast hits to 1276 proteins in 109 species: Archae - 0; Bacteria - 10; Metazoa - 1178; Fungi - 26; Plants - 170; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|36916 : 222.0) no description available & (reliability: 1212.0) & (original description: Putative DAR2, Description = Protein DA1-related 2, PFAM = PF12315;PF00412)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00030018ctg004_1640-11451' '(at2g39830 : 520.0) DA1-related protein 2 (DAR2); FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: LIM domain-containing protein (TAIR:AT4G36860.1); Has 1539 Blast hits to 1276 proteins in 109 species: Archae - 0; Bacteria - 10; Metazoa - 1178; Fungi - 26; Plants - 170; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|36916 : 186.0) no description available & (reliability: 1040.0) & (original description: Putative DAR2, Description = Protein DA1-related 2, PFAM = PF00412;PF12315;PF12315)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00030025ctg001_28614-31641' '(at4g14465 : 190.0) AT-hook motif nuclear-localized protein 20 (AHL20); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 19 (TAIR:AT3G04570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 134.0) no description available & (reliability: 346.0) & (original description: Putative AGF1, Description = AT hook motif DNA-binding family protein, PFAM = PF03479)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00030662ctg021_34080-39141' '(at2g05160 : 463.0) CCCH-type zinc fingerfamily protein with RNA-binding domain; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G52980.1); Has 286 Blast hits to 218 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 277; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 926.0) & (original description: Putative At2g05160, Description = Zinc finger CCCH domain-containing protein 18, PFAM = PF00076;PF12872)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00030685ctg009_13091-19169' '(at1g49920 : 142.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (gnl|cdd|72786 : 96.6) no description available & (reliability: 280.0) & (original description: Putative Os06g0632700, Description = Os06g0632700 protein, PFAM = PF00564;PF03108;PF04434;PF10551)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00030940ctg014_494-7664' '(at3g19130 : 423.0) RNA-binding protein 47B (RBP47B); FUNCTIONS IN: RNA binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47A (TAIR:AT1G49600.1); Has 37628 Blast hits to 21966 proteins in 866 species: Archae - 14; Bacteria - 2376; Metazoa - 18486; Fungi - 4600; Plants - 6856; Viruses - 8; Other Eukaryotes - 5288 (source: NCBI BLink). & (gnl|cdd|35370 : 137.0) no description available & (gnl|cdd|31068 : 93.2) no description available & (reliability: 798.0) & (original description: Putative RBP47, Description = Polyadenylate-binding protein RBP47, PFAM = PF00076;PF00076;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00031036ctg001_16736-25281' '(at3g21480 : 341.0) BRCT domain-containing DNA repair protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: BRCT domain-containing DNA repair protein (TAIR:AT4G03130.1); Has 730 Blast hits to 680 proteins in 204 species: Archae - 4; Bacteria - 146; Metazoa - 309; Fungi - 49; Plants - 100; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|37254 : 158.0) no description available & (reliability: 682.0) & (original description: Putative , Description = Mitochondrial substrate carrier family protein ucpB, PFAM = PF16770)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00032243ctg022_10698-20172' '(at1g20110 : 359.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT3G14270.1); Has 29282 Blast hits to 20083 proteins in 828 species: Archae - 11; Bacteria - 1932; Metazoa - 10999; Fungi - 6486; Plants - 4104; Viruses - 590; Other Eukaryotes - 5160 (source: NCBI BLink). & (gnl|cdd|47412 : 87.4) no description available & (reliability: 718.0) & (original description: Putative FREE1, Description = Os07g0573300 protein, PFAM = PF01363)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00032772ctg005_20162-22869' '(at5g59550 : 84.3) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Protein of unknown function DUF1117 (InterPro:IPR010543); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G46620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative PGSC0003DMG400018972, Description = E3 ubiquitin-protein ligase RING1-like protein, PFAM = PF13639)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00033034ctg000_1-5390' '(at5g61190 : 273.0) putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain; FUNCTIONS IN: zinc ion binding, nucleic acid binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT3G62200.1); Has 3024 Blast hits to 2428 proteins in 238 species: Archae - 10; Bacteria - 118; Metazoa - 1187; Fungi - 140; Plants - 554; Viruses - 10; Other Eukaryotes - 1005 (source: NCBI BLink). & (gnl|cdd|86646 : 205.0) no description available & (reliability: 546.0) & (original description: Putative BnaA09g39750D, Description = BnaA09g39750D protein, PFAM = PF14418;PF01936)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00035018ctg001_1-5057' '(at2g02160 : 268.0) CCCH-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 10885 Blast hits to 7444 proteins in 511 species: Archae - 23; Bacteria - 415; Metazoa - 5228; Fungi - 922; Plants - 581; Viruses - 184; Other Eukaryotes - 3532 (source: NCBI BLink). & (gnl|cdd|39988 : 171.0) no description available & (reliability: 536.0) & (original description: Putative At2g02160, Description = Zinc finger CCCH domain-containing protein 17, PFAM = PF14608;PF15663)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00035147ctg005_6228-11877' '(at1g31040 : 244.0) PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT2G12646.1); Has 411 Blast hits to 411 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 411; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 177.0) no description available & (reliability: 488.0) & (original description: Putative Sb04g004830, Description = Putative uncharacterized protein Sb04g004830, PFAM = PF04640)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00035380ctg003_21417-32312' '(at1g78540 : 534.0) Encodes a protein that contains an SH2 domain. It can pull down a 120-kD tyrosine-phosphorylated protein in vitro. It is predicted to act as a transcription factor.; SH2 domain protein B (SHB); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, signal transducer activity; INVOLVED IN: signal transduction, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: stem, flower, root, leaf; CONTAINS InterPro DOMAIN/s: SH2 motif (InterPro:IPR000980), STAT transcription factor, core (InterPro:IPR001217), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: SH2 domain protein A (TAIR:AT1G17040.1). & (reliability: 1068.0) & (original description: Putative SHB, Description = SH2 domain protein B, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00035700ctg006_8541-11387' '(at1g51200 : 129.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT2G36320.1). & (gnl|cdd|38383 : 127.0) no description available & (q9llx1|isap1_orysa : 90.1) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (reliability: 258.0) & (original description: Putative SAP8, Description = Zinc finger A20 and AN1 domain-containing stress-associated protein 8, PFAM = PF01428)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00039201ctg001_1-3650' '(at4g32720 : 242.0) Encodes AtLa1, a member of the highly abundant phosphoprotein La proteins. Predominantly localized to the nucleoplasm and was also detected in the nucleolar cavity. Has RNA binding activity. Required for normal ribosome biogenesis and embryogenesis.; La protein 1 (La1); FUNCTIONS IN: RNA binding; INVOLVED IN: embryo development, ribosome biogenesis; LOCATED IN: nucleoplasm, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA-binding motif (InterPro:IPR014886); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT1G79880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37066 : 93.6) no description available & (gnl|cdd|47984 : 85.2) no description available & (reliability: 484.0) & (original description: Putative LA1, Description = RNA-binding La domain-containing protein, PFAM = PF05383;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00039364ctg008_7540-10033' '(at1g79220 : 341.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G64950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66247 : 154.0) no description available & (gnl|cdd|36481 : 101.0) no description available & (reliability: 682.0) & (original description: Putative BnaA07g34740D, Description = BnaA07g34740D protein, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00039750ctg019_5110-14357' '(at5g15810 : 876.0) N2,N2-dimethylguanosine tRNA methyltransferase; FUNCTIONS IN: RNA binding, tRNA (guanine-N2-)-methyltransferase activity; INVOLVED IN: tRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: N2,N2-dimethylguanosine tRNA methyltransferase (InterPro:IPR002905); BEST Arabidopsis thaliana protein match is: N2,N2-dimethylguanosine tRNA methyltransferase (TAIR:AT3G02320.1); Has 1017 Blast hits to 963 proteins in 359 species: Archae - 255; Bacteria - 70; Metazoa - 198; Fungi - 150; Plants - 103; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink). & (gnl|cdd|36467 : 622.0) no description available & (gnl|cdd|85826 : 352.0) no description available & (reliability: 1752.0) & (original description: Putative trmt1, Description = Putative tRNA (Guanine(26)-N(2))-dimethyltransferase, PFAM = PF02005)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00042937ctg005_3000-7919' '(at2g05160 : 343.0) CCCH-type zinc fingerfamily protein with RNA-binding domain; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G52980.1); Has 286 Blast hits to 218 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 277; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 686.0) & (original description: Putative At2g05160, Description = Zinc finger CCCH domain-containing protein 18, PFAM = PF12872;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00043398ctg002_214-5466' '(at5g63830 : 397.0) HIT-type Zinc finger family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, HIT-type (InterPro:IPR007529); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39518 : 296.0) no description available & (reliability: 794.0) & (original description: Putative , Description = Leucine-rich receptor-like kinase family protein, putative, PFAM = PF04438)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00046380ctg002_1-5267' '(at5g54310 : 231.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. Regulates membrane trafficking and organ separation.; ARF-GAP domain 5 (AGD5); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: floral organ abscission, activation of ARF GTPase activity; LOCATED IN: cytosol, trans-Golgi network, endosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 15 (TAIR:AT3G17660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35922 : 174.0) no description available & (gnl|cdd|85433 : 136.0) no description available & (reliability: 462.0) & (original description: Putative smap1, Description = ArfGap-domain-containing protein, PFAM = PF01412)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00046504ctg003_1469-8719' '(at1g07705 : 570.0) NOT2 / NOT3 / NOT5 family; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282); BEST Arabidopsis thaliana protein match is: VIRE2 interacting protein 2 (TAIR:AT5G59710.1); Has 3259 Blast hits to 2610 proteins in 429 species: Archae - 0; Bacteria - 983; Metazoa - 821; Fungi - 441; Plants - 185; Viruses - 8; Other Eukaryotes - 821 (source: NCBI BLink). & (gnl|cdd|86562 : 194.0) no description available & (gnl|cdd|37361 : 98.2) no description available & (reliability: 1058.0) & (original description: Putative VIP2, Description = Probable NOT transcription complex subunit VIP2, PFAM = PF04153)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00047070ctg003_535-3943' '(at4g24015 : 85.5) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G10150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative RHA4A, Description = RING-H2 zinc finger protein RHA4a, PFAM = PF13639)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00048058ctg002_10926-16101' '(at5g54310 : 317.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. Regulates membrane trafficking and organ separation.; ARF-GAP domain 5 (AGD5); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: floral organ abscission, activation of ARF GTPase activity; LOCATED IN: cytosol, trans-Golgi network, endosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 15 (TAIR:AT3G17660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35922 : 186.0) no description available & (gnl|cdd|85433 : 151.0) no description available & (reliability: 634.0) & (original description: Putative v1g130736, Description = Predicted protein, PFAM = PF01412)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00048350ctg001_1595-4701' '(at1g79220 : 344.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G64950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66247 : 155.0) no description available & (gnl|cdd|36481 : 101.0) no description available & (reliability: 688.0) & (original description: Putative BnaA07g34740D, Description = BnaA07g34740D protein, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00049407ctg014_11920-17503' '(at4g27680 : 404.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G53540.1); Has 30260 Blast hits to 27737 proteins in 3108 species: Archae - 1486; Bacteria - 10702; Metazoa - 4856; Fungi - 3534; Plants - 2690; Viruses - 34; Other Eukaryotes - 6958 (source: NCBI BLink). & (gnl|cdd|35956 : 321.0) no description available & (gnl|cdd|30812 : 146.0) no description available & (p54774|cdc48_soybn : 109.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 808.0) & (original description: Putative atad1, Description = ATPase family AAA domain-containing protein 1, PFAM = PF00004)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00050344ctg004_364-12741' '(at5g12350 : 831.0) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Pleckstrin homology-type (InterPro:IPR011993), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G19420.1); Has 23773 Blast hits to 8858 proteins in 456 species: Archae - 73; Bacteria - 2346; Metazoa - 9625; Fungi - 1299; Plants - 3027; Viruses - 3; Other Eukaryotes - 7400 (source: NCBI BLink). & (gnl|cdd|34783 : 135.0) no description available & (gnl|cdd|36640 : 114.0) no description available & (reliability: 1662.0) & (original description: Putative At5g12350, Description = Regulator of chromosome condensation-like protein with FYVE zinc finger domain-containing protein, PFAM = PF01363;PF00415;PF00415;PF00415;PF00415;PF00415;PF00415)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00052259ctg003_430-5272' '(at5g55580 : 525.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT1G78930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36481 : 119.0) no description available & (gnl|cdd|66247 : 100.0) no description available & (reliability: 1050.0) & (original description: Putative MTERF9, Description = Transcription termination factor MTERF9, chloroplastic, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00053960ctg002_9805-15518' '(at1g75340 : 119.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571). & (reliability: 238.0) & (original description: Putative NbCG1b, Description = Nuclear pore complex protein CG1b, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00054677ctg002_12663-17629' '(at3g13810 : 292.0) indeterminate(ID)-domain 11 (IDD11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 7 (TAIR:AT1G55110.1). & (reliability: 552.0) & (original description: Putative C2H2L12, Description = C2H2L domain class transcription factor, PFAM = PF12171)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00055743ctg001_6174-13229' '(at1g11650 : 424.0) RBP45B; FUNCTIONS IN: RNA binding; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 29660 Blast hits to 18296 proteins in 811 species: Archae - 14; Bacteria - 2273; Metazoa - 15265; Fungi - 3531; Plants - 5870; Viruses - 0; Other Eukaryotes - 2707 (source: NCBI BLink). & (gnl|cdd|35370 : 141.0) no description available & (gnl|cdd|31068 : 93.6) no description available & (p19682|roc3_nicsy : 87.8) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (reliability: 848.0) & (original description: Putative RBP45, Description = Polyadenylate-binding protein RBP45, PFAM = PF00076;PF00076;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00056520ctg000_548-9399' '(at3g48050 : 1028.0) BAH domain ;TFIIS helical bundle-like domain; FUNCTIONS IN: transcription regulator activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type (InterPro:IPR003617), Transcription factor IIS, N-terminal (InterPro:IPR017923), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: BAH domain ;TFIIS helical bundle-like domain (TAIR:AT3G48060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37097 : 246.0) no description available & (gnl|cdd|72853 : 188.0) no description available & (reliability: 2056.0) & (original description: Putative BnaA09g06260D, Description = BnaA09g06260D protein, PFAM = PF08711;PF01426)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00057914ctg002_1-600' '(at4g26000 : 98.2) Encodes a novel Arabidopsis gene encoding a polypeptide with K-homology (KH) RNA-binding modules, which acts on vegetative growth and pistil development. Genetic studies suggest that PEP interacts with element(s) of the CLAVATA signaling pathway.; PEPPER (PEP); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: shoot development, gynoecium development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT3G04610.1); Has 2804 Blast hits to 2065 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 1818; Fungi - 225; Plants - 670; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative FLK, Description = K Homology domain-containing protein, PFAM = PF00013)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00057914ctg003_2891-8342' '(at4g26000 : 318.0) Encodes a novel Arabidopsis gene encoding a polypeptide with K-homology (KH) RNA-binding modules, which acts on vegetative growth and pistil development. Genetic studies suggest that PEP interacts with element(s) of the CLAVATA signaling pathway.; PEPPER (PEP); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: shoot development, gynoecium development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT3G04610.1); Has 2804 Blast hits to 2065 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 1818; Fungi - 225; Plants - 670; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|37401 : 112.0) no description available & (reliability: 636.0) & (original description: Putative FLK, Description = Poly(RC)-binding protein, putative, PFAM = PF00013;PF00013)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben044scf00059466ctg000_955-6722' '(at1g03840 : 324.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 590.0) & (original description: Putative IDD2, Description = Protein indeterminate-domain 2, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101ctg15646_1-4670' '(at2g30580 : 186.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 2 (DRIP2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 1 (TAIR:AT1G06770.1); Has 1631 Blast hits to 1626 proteins in 163 species: Archae - 0; Bacteria - 2; Metazoa - 1227; Fungi - 58; Plants - 232; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative PGSC0003DMG400004205, Description = BnaC04g13880D protein, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101ctg16134_499-7003' '(at1g09920 : 236.0) TRAF-type zinc finger-related; BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT4G15420.1); Has 897 Blast hits to 860 proteins in 162 species: Archae - 0; Bacteria - 0; Metazoa - 570; Fungi - 106; Plants - 68; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative BnaC05g07400D, Description = BnaC05g07400D protein, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00051_31911-45531' '(at1g11650 : 424.0) RBP45B; FUNCTIONS IN: RNA binding; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 29660 Blast hits to 18296 proteins in 811 species: Archae - 14; Bacteria - 2273; Metazoa - 15265; Fungi - 3531; Plants - 5870; Viruses - 0; Other Eukaryotes - 2707 (source: NCBI BLink). & (gnl|cdd|35370 : 137.0) no description available & (p28644|roc1_spiol : 86.3) 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) & (reliability: 848.0) & (original description: Putative nbp1, Description = Polyadenylate-binding protein RBP47B, PFAM = PF00076;PF00076;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00066_499988-503276' '(at1g64260 : 99.4) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 198.8) & (original description: Putative Sb07g022850, Description = Putative ovule protein, PFAM = PF10551;PF04434)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00073_556921-564547' '(at1g29800 : 618.0) RING/FYVE/PHD-type zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Ysc84 actin-binding domain (InterPro:IPR007461); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD-type zinc finger family protein (TAIR:AT3G43230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37054 : 418.0) no description available & (gnl|cdd|32754 : 142.0) no description available & (reliability: 1236.0) & (original description: Putative At1g29800, Description = Putative uncharacterized protein At1g29800, PFAM = PF01363;PF04366)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00104_190843-208553' '(at1g06770 : 285.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. The DRIP1-GFP fusion protein is nuclear-localized. DRIP1 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 1 (DRIP1); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 2 (TAIR:AT2G30580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37871 : 138.0) no description available & (reliability: 570.0) & (original description: Putative Os03g0798200, Description = Os03g0798200 protein, PFAM = PF13923)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00109_448945-455054' '(at5g13990 : 550.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein C2 (EXO70C2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, exocyst; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein C1 (TAIR:AT5G13150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37555 : 458.0) no description available & (gnl|cdd|86233 : 344.0) no description available & (reliability: 1044.0) & (original description: Putative EXO70C2, Description = Exocyst subunit exo70 family protein C2, PFAM = PF03081)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00109_572107-577188' '(at4g14605 : 524.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G21710.1); Has 1482 Blast hits to 884 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 114; Fungi - 0; Plants - 1279; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). & (gnl|cdd|66247 : 126.0) no description available & (gnl|cdd|36481 : 98.6) no description available & (reliability: 1048.0) & (original description: Putative MTERF5, Description = Transcription termination factor MTERF5, chloroplastic, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00110_568781-574192' '(at4g01730 : 374.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT2G33640.1); Has 4882 Blast hits to 4865 proteins in 242 species: Archae - 0; Bacteria - 0; Metazoa - 2140; Fungi - 628; Plants - 869; Viruses - 0; Other Eukaryotes - 1245 (source: NCBI BLink). & (gnl|cdd|36525 : 134.0) no description available & (gnl|cdd|34870 : 93.2) no description available & (reliability: 748.0) & (original description: Putative PAT18, Description = Protein S-acyltransferase 18, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00116_122260-127710' '(at4g21430 : 277.0) B160; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, RING-type (InterPro:IPR001841), Transcription factor jumonji (InterPro:IPR013129), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G11950.1); Has 965 Blast hits to 873 proteins in 89 species: Archae - 0; Bacteria - 0; Metazoa - 302; Fungi - 24; Plants - 623; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|36570 : 157.0) no description available & (reliability: 554.0) & (original description: Putative glysoja_028624, Description = Lysine-specific demethylase 3B, putative isoform 1, PFAM = PF08879)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00163_1208547-1212043' '(at5g19910 : 218.0) MED31; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription; LOCATED IN: mediator complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med31 (InterPro:IPR008831). & (gnl|cdd|69205 : 163.0) no description available & (gnl|cdd|39289 : 123.0) no description available & (reliability: 436.0) & (original description: Putative MED31, Description = Mediator of RNA polymerase II transcription subunit 31, PFAM = PF05669)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00163_1272825-1275730' '(at4g17600 : 202.0) Encodes Lil3:1 (light-harvesting-like) protein. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. A generic LHC motif is present in Lil3:1.; LIL3:1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT5G47110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative LIL3:1, Description = Lil3 protein, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00240_436498-442100' '(at1g53860 : 290.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT1G30320.1); Has 458 Blast hits to 455 proteins in 58 species: Archae - 2; Bacteria - 9; Metazoa - 29; Fungi - 14; Plants - 379; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|67381 : 95.4) no description available & (reliability: 580.0) & (original description: Putative BnaCnng57840D, Description = BnaCnng57840D protein, PFAM = PF03763)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00264_371573-374744' '(at1g21000 : 291.0) PLATZ transcription factor family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT1G76590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86704 : 194.0) no description available & (reliability: 582.0) & (original description: Putative BnaC08g07590D, Description = BnaC08g07590D protein, PFAM = PF04640)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00271_171163-174680' '(at5g45120 : 585.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT4G16563.1); Has 2287 Blast hits to 2274 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 209; Fungi - 201; Plants - 1822; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|36553 : 174.0) no description available & (reliability: 1170.0) & (original description: Putative At5g45120, Description = Aspartyl protease family protein, PFAM = PF14543;PF14541)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00271_841425-845705' '(at1g32540 : 152.0) Encodes a protein with 3 plant-specific zinc finger domains that acts as a positive regulator of cell death.; lsd one like 1 (LOL1); FUNCTIONS IN: DNA binding; INVOLVED IN: induction of apoptosis; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735); BEST Arabidopsis thaliana protein match is: LSD1 zinc finger family protein (TAIR:AT4G20380.7); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative LOL3, Description = Protein LOL3, PFAM = PF06943;PF06943;PF06943)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00288_679039-682289' '(at5g58430 : 799.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein B1 (EXO70B1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: plasma membrane, exocyst; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein B2 (TAIR:AT1G07000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37555 : 549.0) no description available & (gnl|cdd|86233 : 521.0) no description available & (reliability: 1598.0) & (original description: Putative EXO70B1, Description = Exocyst complex component EXO70B1, PFAM = PF03081)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00290_250099-262377' '(at5g19420 : 1472.0) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-related (InterPro:IPR017455), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Pleckstrin homology-type (InterPro:IPR011993), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G12350.1). & (gnl|cdd|34783 : 127.0) no description available & (gnl|cdd|36640 : 121.0) no description available & (reliability: 2944.0) & (original description: Putative PRAF1, Description = Regulator of chromosome condensation and FYVE zinc finger domain-containing protein, PFAM = PF13713;PF00415;PF00415;PF00415;PF00415;PF00415;PF00415;PF16627;PF16457;PF08381;PF01363)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00313_889925-901938' '(gnl|cdd|38246 : 193.0) no description available & (at3g20800 : 181.0) Cell differentiation, Rcd1-like protein; CONTAINS InterPro DOMAIN/s: Cell differentiation, Rcd1-like (InterPro:IPR007216); BEST Arabidopsis thaliana protein match is: Cell differentiation, Rcd1-like protein (TAIR:AT5G12980.1); Has 491 Blast hits to 488 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 160; Fungi - 135; Plants - 110; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|80055 : 174.0) no description available & (reliability: 362.0) & (original description: Putative PIM1, Description = Cell differentiation protein rcd1, putative, expressed, PFAM = PF04078;PF04078)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00321_177412-184697' '(at3g19130 : 411.0) RNA-binding protein 47B (RBP47B); FUNCTIONS IN: RNA binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47A (TAIR:AT1G49600.1); Has 37628 Blast hits to 21966 proteins in 866 species: Archae - 14; Bacteria - 2376; Metazoa - 18486; Fungi - 4600; Plants - 6856; Viruses - 8; Other Eukaryotes - 5288 (source: NCBI BLink). & (gnl|cdd|35370 : 125.0) no description available & (gnl|cdd|31068 : 90.9) no description available & (p19683|roc4_nicsy : 81.6) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 778.0) & (original description: Putative RBP47, Description = Polyadenylate-binding protein RBP47, PFAM = PF00076;PF00076;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00339_1371044-1374464' '(at3g28917 : 102.0) mini zinc finger 2 (MIF2); CONTAINS InterPro DOMAIN/s: ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456); BEST Arabidopsis thaliana protein match is: mini zinc finger (TAIR:AT1G18835.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68346 : 96.5) no description available & (reliability: 204.0) & (original description: Putative MIF2, Description = Mini zinc finger protein 2, PFAM = PF04770)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00343_184083-187204' '(at1g21150 : 135.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 922 Blast hits to 791 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 903; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|36481 : 103.0) no description available & (gnl|cdd|66247 : 103.0) no description available & (reliability: 270.0) & (original description: Putative PGSC0003DMG400006304, Description = Putative ovule protein, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00343_202028-205110' '(at5g07900 : 147.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT1G21150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66247 : 110.0) no description available & (gnl|cdd|36481 : 99.4) no description available & (reliability: 294.0) & (original description: Putative PGSC0003DMG400016579, Description = Putative ovule protein, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00343_214524-218740' '(at5g64950 : 139.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66247 : 101.0) no description available & (gnl|cdd|36481 : 96.7) no description available & (reliability: 278.0) & (original description: Putative PGSC0003DMG400006304, Description = Putative ovule protein, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00343_215628-218643' '(at5g64950 : 139.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66247 : 101.0) no description available & (gnl|cdd|36481 : 97.5) no description available & (reliability: 278.0) & (original description: Putative PGSC0003DMG400016579, Description = Putative ovule protein, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00343_218947-222086' '(at5g07900 : 134.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT1G21150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66247 : 100.0) no description available & (gnl|cdd|36481 : 90.2) no description available & (reliability: 268.0) & (original description: Putative PGSC0003DMG401027557, Description = Putative ovule protein, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00349_635924-642178' '(at5g10770 : 450.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: DNA binding, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G10760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36553 : 220.0) no description available & (gnl|cdd|84452 : 94.9) no description available & (q6yny7|asp1_orysa : 80.9) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 900.0) & (original description: Putative cnd41, Description = Aspartic proteinase nepenthesin-2, PFAM = PF14541;PF14543)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00366_1155121-1161583' '(at1g67325 : 304.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: TBP-associated factor 15 (TAIR:AT1G50300.1). & (reliability: 608.0) & (original description: Putative At1g67325, Description = RanBP2-type zinc finger protein At1g67325, PFAM = PF00641;PF00641;PF00641)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00369_81833-87677' '(at3g50700 : 270.0) zinc finger protein, similar to maize Indeterminate1 (ID1); indeterminate(ID)-domain 2 (IDD2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G66730.1); Has 54862 Blast hits to 20312 proteins in 388 species: Archae - 0; Bacteria - 661; Metazoa - 50262; Fungi - 473; Plants - 881; Viruses - 5; Other Eukaryotes - 2580 (source: NCBI BLink). & (reliability: 532.0) & (original description: Putative IDD2, Description = Zinc finger protein MAGPIE, PFAM = PF12171)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00369_2551967-2557180' '(at4g11060 : 271.0) mitochondrially targeted single-stranded DNA binding protein (MTSSB); FUNCTIONS IN: single-stranded DNA binding; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Primosome PriB/single-strand DNA-binding (InterPro:IPR000424); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT3G18580.1); Has 3842 Blast hits to 3842 proteins in 1060 species: Archae - 0; Bacteria - 2446; Metazoa - 112; Fungi - 0; Plants - 68; Viruses - 25; Other Eukaryotes - 1191 (source: NCBI BLink). & (gnl|cdd|36866 : 155.0) no description available & (reliability: 542.0) & (original description: Putative At4g11060, Description = Single-stranded DNA-binding protein, mitochondrial, PFAM = PF00436)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00421_17902-24158' '(at1g49920 : 166.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (gnl|cdd|72786 : 81.2) no description available & (reliability: 308.0) & (original description: Putative Os06g0632700, Description = Os06g0632700 protein, PFAM = PF10551;PF04434;PF03108)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00435_560161-584811' '(at3g20800 : 513.0) Cell differentiation, Rcd1-like protein; CONTAINS InterPro DOMAIN/s: Cell differentiation, Rcd1-like (InterPro:IPR007216); BEST Arabidopsis thaliana protein match is: Cell differentiation, Rcd1-like protein (TAIR:AT5G12980.1); Has 491 Blast hits to 488 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 160; Fungi - 135; Plants - 110; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|80055 : 430.0) no description available & (gnl|cdd|38246 : 426.0) no description available & (reliability: 1026.0) & (original description: Putative RQCD1, Description = Cell differentiation protein RCD1 homolog, PFAM = PF04078)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00479_195117-207684' '(at1g07840 : 227.0) Sas10/Utp3/C1D family; CONTAINS InterPro DOMAIN/s: Sas10/Utp3/C1D (InterPro:IPR007146); BEST Arabidopsis thaliana protein match is: Sas10/U3 ribonucleoprotein (Utp) family protein (TAIR:AT2G43650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38327 : 94.8) no description available & (reliability: 454.0) & (original description: Putative At1g07840, Description = AT1G07840 protein, PFAM = PF04000)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00479_381213-386058' '(at1g23750 : 175.0) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT1G10590.2); Has 249 Blast hits to 249 proteins in 61 species: Archae - 55; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative At4g28440, Description = Uncharacterized protein At4g28440, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00482_44125-48523' '(at2g39380 : 512.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H2 (EXO70H2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: leaf apex, hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H1 (TAIR:AT3G55150.1); Has 836 Blast hits to 829 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 44; Plants - 635; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|37555 : 498.0) no description available & (gnl|cdd|86233 : 494.0) no description available & (reliability: 1002.0) & (original description: Putative EXO70H7, Description = AT5g59730/mth12_130, PFAM = PF03081)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00482_45061-48445' '(at3g55150 : 293.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H1 (EXO70H1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, exocyst; EXPRESSED IN: sperm cell, root, pollen tube; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H2 (TAIR:AT2G39380.1); Has 814 Blast hits to 800 proteins in 89 species: Archae - 0; Bacteria - 0; Metazoa - 134; Fungi - 34; Plants - 631; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|37555 : 287.0) no description available & (gnl|cdd|86233 : 276.0) no description available & (reliability: 586.0) & (original description: Putative ACI49, Description = ACI49, PFAM = PF03081)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00482_1246624-1250433' '(at3g45260 : 274.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G60470.1); Has 54288 Blast hits to 20581 proteins in 284 species: Archae - 0; Bacteria - 7; Metazoa - 49362; Fungi - 343; Plants - 724; Viruses - 2; Other Eukaryotes - 3850 (source: NCBI BLink). & (reliability: 508.0) & (original description: Putative C2H2L8, Description = C2H2L domain class transcription factor, PFAM = PF12171)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00496_40065-49483' '(at2g20280 : 351.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 6263 Blast hits to 4194 proteins in 354 species: Archae - 14; Bacteria - 176; Metazoa - 2274; Fungi - 740; Plants - 301; Viruses - 209; Other Eukaryotes - 2549 (source: NCBI BLink). & (gnl|cdd|36974 : 246.0) no description available & (gnl|cdd|34849 : 151.0) no description available & (reliability: 702.0) & (original description: Putative dfrp1, Description = Translation machinery-associated protein 46, PFAM = PF16543)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00505_124997-134437' '(at2g47850 : 377.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1); Has 1724 Blast hits to 1003 proteins in 159 species: Archae - 0; Bacteria - 7; Metazoa - 368; Fungi - 218; Plants - 971; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (q5naw2|zfnl1_orysa : 355.0) Zinc finger CCCH domain-containing protein ZFN-like 1 - Oryza sativa (Rice) & (gnl|cdd|36890 : 109.0) no description available & (reliability: 754.0) & (original description: Putative At2g47850, Description = Zinc finger CCCH domain-containing protein 32, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00509_34608-86140' '(at3g45260 : 320.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G60470.1); Has 54288 Blast hits to 20581 proteins in 284 species: Archae - 0; Bacteria - 7; Metazoa - 49362; Fungi - 343; Plants - 724; Viruses - 2; Other Eukaryotes - 3850 (source: NCBI BLink). & (reliability: 578.0) & (original description: Putative IDD9, Description = Protein indeterminate-domain 9, PFAM = PF12171)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00539_843501-847053' '(at5g27280 : 201.0) Zim17-type zinc finger protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, Zim17-type (InterPro:IPR007853); BEST Arabidopsis thaliana protein match is: Zim17-type zinc finger protein (TAIR:AT1G68730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38487 : 107.0) no description available & (gnl|cdd|72806 : 98.4) no description available & (reliability: 402.0) & (original description: Putative ZFP130, Description = Transcription factor ZFP130, PFAM = PF05180)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00542_815086-818375' '(at5g37540 : 527.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G66180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36553 : 201.0) no description available & (reliability: 1054.0) & (original description: Putative At5g37540, Description = AT5g37540/mpa22_p_70, PFAM = PF14541;PF14543)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00555_49401-55217' '(at2g36930 : 180.0) zinc finger (C2H2 type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); Has 726 Blast hits to 418 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 301; Fungi - 225; Plants - 112; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|38618 : 95.9) no description available & (reliability: 360.0) & (original description: Putative Os08g0564500, Description = Os08g0564500 protein, PFAM = PF12171)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00613_637916-641368' '(at1g58330 : 147.0) ZW2; BEST Arabidopsis thaliana protein match is: RESPONSE TO ABA AND SALT 1 (TAIR:AT1G09950.1); Has 556 Blast hits to 556 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 556; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (o24160|tga21_tobac : 88.2) TGACG-sequence-specific DNA-binding protein TGA-2.1 (TGA2.1) - Nicotiana tabacum (Common tobacco) & (reliability: 294.0) & (original description: Putative PGSC0003DMG400004453, Description = DOG1 domain-containing protein, PFAM = PF14144)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00683_46281-53309' '(at2g05160 : 350.0) CCCH-type zinc fingerfamily protein with RNA-binding domain; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G52980.1); Has 286 Blast hits to 218 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 277; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 700.0) & (original description: Putative At2g05160, Description = Zinc finger CCCH domain-containing protein 18, PFAM = PF00076;PF12872)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00712_671002-677673' '(at2g33640 : 555.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT4G15080.1); Has 4820 Blast hits to 4679 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 2062; Fungi - 621; Plants - 835; Viruses - 0; Other Eukaryotes - 1302 (source: NCBI BLink). & (gnl|cdd|36525 : 151.0) no description available & (gnl|cdd|65336 : 92.3) no description available & (reliability: 1110.0) & (original description: Putative PAT21, Description = Protein S-acyltransferase 21, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00713_458144-468047' '(at3g53710 : 420.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ARF-GAP domain 6 (AGD6); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 7 (TAIR:AT2G37550.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35923 : 293.0) no description available & (gnl|cdd|85433 : 141.0) no description available & (reliability: 840.0) & (original description: Putative AGD6, Description = Probable ADP-ribosylation factor GTPase-activating protein AGD6, PFAM = PF01412)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00725_298420-301874' '(at3g18490 : 491.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G25510.1); Has 4095 Blast hits to 4076 proteins in 356 species: Archae - 0; Bacteria - 4; Metazoa - 1079; Fungi - 788; Plants - 1999; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|36553 : 237.0) no description available & (gnl|cdd|84452 : 88.4) no description available & (reliability: 982.0) & (original description: Putative ASPG1, Description = Protein ASPARTIC PROTEASE IN GUARD CELL 1, PFAM = PF14541;PF14543)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00735_615479-624123' '(at2g41835 : 322.0) zinc finger (C2H2 type, AN1-like) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type, AN1-like) family protein (TAIR:AT3G57480.1); Has 760 Blast hits to 744 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 485; Fungi - 122; Plants - 83; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|38393 : 178.0) no description available & (reliability: 644.0) & (original description: Putative SAP16, Description = Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16, PFAM = PF01428;PF01428)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00755_97246-101441' '(at1g64260 : 179.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 95.0) no description available & (reliability: 358.0) & (original description: Putative Sb08g020220, Description = Putative uncharacterized protein Sb08g020220, PFAM = PF03108;PF10551;PF04434)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00761_538944-541369' '(at3g12630 : 106.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT2G36320.1); Has 1013 Blast hits to 1009 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 428; Fungi - 9; Plants - 446; Viruses - 6; Other Eukaryotes - 124 (source: NCBI BLink). & (q9llx1|isap1_orysa : 92.0) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (gnl|cdd|38383 : 88.6) no description available & (reliability: 212.0) & (original description: Putative SAP5, Description = Zinc finger A20 and AN1 domain-containing stress-associated protein 5, PFAM = PF01428)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00820_340624-350747' '(at1g65260 : 370.0) Encodes a protein required for thylakoid membrane formation.; plastid transcriptionally active 4 (PTAC4); INVOLVED IN: vesicle organization, thylakoid membrane organization; LOCATED IN: in 8 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PspA/IM30 (InterPro:IPR007157); Has 3123 Blast hits to 3108 proteins in 1139 species: Archae - 38; Bacteria - 2412; Metazoa - 160; Fungi - 68; Plants - 89; Viruses - 95; Other Eukaryotes - 261 (source: NCBI BLink). & (q8s0j7|im30_orysa : 340.0) Probable membrane-associated 30 kDa protein, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|32027 : 145.0) no description available & (reliability: 740.0) & (original description: Putative VIPP1, Description = Membrane-associated protein VIPP1, chloroplastic, PFAM = PF04012)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00859_177166-181104' '(at3g26935 : 251.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G41060.1); Has 5153 Blast hits to 5144 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 2200; Fungi - 770; Plants - 850; Viruses - 0; Other Eukaryotes - 1333 (source: NCBI BLink). & (gnl|cdd|36525 : 172.0) no description available & (gnl|cdd|34870 : 109.0) no description available & (reliability: 502.0) & (original description: Putative PAT05, Description = Palmitoyltransferase, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00859_177244-180269' '(at3g26935 : 154.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G41060.1); Has 5153 Blast hits to 5144 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 2200; Fungi - 770; Plants - 850; Viruses - 0; Other Eukaryotes - 1333 (source: NCBI BLink). & (gnl|cdd|36525 : 102.0) no description available & (gnl|cdd|34870 : 82.4) no description available & (reliability: 308.0) & (original description: Putative PAT05, Description = S-acyltransferase, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00867_116903-121346' '(at5g07030 : 482.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G54400.1); Has 3400 Blast hits to 3386 proteins in 327 species: Archae - 0; Bacteria - 0; Metazoa - 917; Fungi - 461; Plants - 1890; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|36553 : 194.0) no description available & (reliability: 926.0) & (original description: Putative AED3, Description = Aspartyl protease AED3, PFAM = PF14543;PF14541)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00876_26538-30022' '(at1g01300 : 541.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis, response to karrikin; LOCATED IN: membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G61820.1); Has 3898 Blast hits to 3871 proteins in 332 species: Archae - 0; Bacteria - 0; Metazoa - 1165; Fungi - 579; Plants - 1953; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (gnl|cdd|36553 : 252.0) no description available & (gnl|cdd|84452 : 106.0) no description available & (reliability: 1006.0) & (original description: Putative APF2, Description = Aspartyl protease family protein 2, PFAM = PF14543;PF14541)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00941_304807-307922' '(at5g64950 : 154.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36481 : 103.0) no description available & (gnl|cdd|66247 : 100.0) no description available & (reliability: 308.0) & (original description: Putative PGSC0003DMG401027557, Description = Putative ovule protein, PFAM = PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00960_341234-359081' '(at1g77930 : 280.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G36040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35934 : 85.1) no description available & (reliability: 560.0) & (original description: Putative At1g77930, Description = At1g77930, PFAM = PF00226)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf00994_774162-779034' '(at1g64260 : 128.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 92.7) no description available & (reliability: 256.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551;PF04434)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01001_12791-18224' '(at3g51950 : 245.0) Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G63450.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 490.0) & (original description: Putative At3g51950, Description = Zinc finger CCCH domain-containing protein 46, PFAM = PF00076;PF00642)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01017_656385-661299' '(at1g04500 : 171.0) CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT2G33350.2); Has 1789 Blast hits to 1789 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 2; Plants - 1654; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|87043 : 85.3) no description available & (reliability: 342.0) & (original description: Putative COL9, Description = CCT motif family protein, PFAM = PF06203)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01025_508050-520656' '(at2g37520 : 842.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (TAIR:AT3G53680.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1684.0) & (original description: Putative At2g37520, Description = Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein, PFAM = PF16135;PF16135)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01025_721623-728601' '(at2g37550 : 383.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ARF-GAP domain 7 (AGD7); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 6 (TAIR:AT3G53710.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35923 : 271.0) no description available & (gnl|cdd|85433 : 139.0) no description available & (reliability: 758.0) & (original description: Putative BnaC04g27040D, Description = BnaC04g27040D protein, PFAM = PF01412)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01025_1321744-1327746' '(at3g09320 : 395.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G04270.1); Has 5137 Blast hits to 5129 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2212; Fungi - 755; Plants - 839; Viruses - 0; Other Eukaryotes - 1331 (source: NCBI BLink). & (gnl|cdd|36529 : 213.0) no description available & (gnl|cdd|34870 : 115.0) no description available & (reliability: 790.0) & (original description: Putative PAT16, Description = Probable protein S-acyltransferase 16, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01027_61673-66677' '(at1g64260 : 154.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 82.3) no description available & (reliability: 308.0) & (original description: Putative At3g06940, Description = Putative mudrA protein, PFAM = PF00564;PF04434;PF03108;PF10551)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01042_260848-266761' '(at1g30320 : 251.0) Remorin family protein; FUNCTIONS IN: DNA binding; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT2G02170.2); Has 12397 Blast hits to 7447 proteins in 1066 species: Archae - 25; Bacteria - 2897; Metazoa - 2750; Fungi - 978; Plants - 862; Viruses - 38; Other Eukaryotes - 4847 (source: NCBI BLink). & (gnl|cdd|67381 : 97.7) no description available & (reliability: 502.0) & (original description: Putative BnaC03g59630D, Description = BnaC03g59630D protein, PFAM = PF03763)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01055_206395-210500' '(at5g13990 : 554.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein C2 (EXO70C2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, exocyst; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein C1 (TAIR:AT5G13150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37555 : 463.0) no description available & (gnl|cdd|86233 : 352.0) no description available & (reliability: 1050.0) & (original description: Putative EXO70C2, Description = Exocyst subunit exo70 family protein C2, PFAM = PF03081)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01109_446727-450387' '(at5g54180 : 464.0) plastid transcriptionally active 15 (PTAC15); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plastid chromosome, chloroplast, nucleoid; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT4G14605.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36481 : 97.5) no description available & (gnl|cdd|66247 : 85.4) no description available & (reliability: 928.0) & (original description: Putative MTERF8, Description = Transcription termination factor MTERF8, chloroplastic, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01143_1264720-1268639' '(at5g61010 : 476.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein E2 (EXO70E2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, exocyst; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein E1 (TAIR:AT3G29400.1); Has 800 Blast hits to 794 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 141; Fungi - 13; Plants - 637; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|37555 : 397.0) no description available & (gnl|cdd|86233 : 286.0) no description available & (reliability: 952.0) & (original description: Putative EXO70E2, Description = AT5G61010 protein, PFAM = PF03081)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01155_164742-170575' '(at1g23750 : 174.0) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT1G10590.2); Has 249 Blast hits to 249 proteins in 61 species: Archae - 55; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative ino1, Description = DNA-binding family protein, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01188_174132-177360' '(at5g64950 : 147.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36481 : 94.0) no description available & (gnl|cdd|66247 : 81.9) no description available & (reliability: 294.0) & (original description: Putative PGSC0003DMG400027540, Description = Putative ovule protein, PFAM = PF02536;PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01194_33607-50270' '(at4g27680 : 494.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G53540.1); Has 30260 Blast hits to 27737 proteins in 3108 species: Archae - 1486; Bacteria - 10702; Metazoa - 4856; Fungi - 3534; Plants - 2690; Viruses - 34; Other Eukaryotes - 6958 (source: NCBI BLink). & (gnl|cdd|35956 : 400.0) no description available & (gnl|cdd|30812 : 203.0) no description available & (p54774|cdc48_soybn : 154.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 988.0) & (original description: Putative atad1, Description = ATPase family AAA domain-containing protein 1, PFAM = PF00004)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01241_793996-800209' '(at2g02070 : 291.0) indeterminate(ID)-domain 5 (IDD5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 4 (TAIR:AT2G02080.1); Has 61158 Blast hits to 25844 proteins in 587 species: Archae - 8; Bacteria - 480; Metazoa - 52168; Fungi - 1154; Plants - 982; Viruses - 10; Other Eukaryotes - 6356 (source: NCBI BLink). & (reliability: 558.0) & (original description: Putative IDD5, Description = Protein indeterminate-domain 5, chloroplastic, PFAM = PF12171)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01243_339148-344658' '(at1g70150 : 454.0) zinc ion binding; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893); Has 188 Blast hits to 183 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 69; Fungi - 18; Plants - 88; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 908.0) & (original description: Putative At1g70150, Description = Zinc ion binding protein, PFAM = PF01753)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01269_426979-433787' '(at4g27000 : 389.0) ATRBP45C; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35370 : 136.0) no description available & (gnl|cdd|31068 : 91.3) no description available & (p19683|roc4_nicsy : 81.3) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 778.0) & (original description: Putative RBP45, Description = Polyadenylate-binding protein RBP45, PFAM = PF00076;PF00076;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01295_560782-571093' '(at5g18550 : 335.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT3G06410.1); Has 2990 Blast hits to 1278 proteins in 210 species: Archae - 0; Bacteria - 30; Metazoa - 599; Fungi - 302; Plants - 1043; Viruses - 0; Other Eukaryotes - 1016 (source: NCBI BLink). & (q5naw2|zfnl1_orysa : 331.0) Zinc finger CCCH domain-containing protein ZFN-like 1 - Oryza sativa (Rice) & (gnl|cdd|36890 : 106.0) no description available & (reliability: 654.0) & (original description: Putative At5g18550, Description = Zinc finger CCCH domain-containing protein 58, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01372_122068-124976' '(at2g36000 : 218.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G34620.1); Has 802 Blast hits to 604 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 0; Plants - 717; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|66247 : 108.0) no description available & (gnl|cdd|36481 : 86.3) no description available & (reliability: 436.0) & (original description: Putative BnaA03g16480D, Description = BnaA03g16480D protein, PFAM = PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01385_848406-855652' '(at1g47500 : 414.0) RNA-binding protein 47C' (RBP47C'); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47C (TAIR:AT1G47490.1); Has 31938 Blast hits to 20447 proteins in 871 species: Archae - 18; Bacteria - 2118; Metazoa - 16550; Fungi - 3781; Plants - 6384; Viruses - 46; Other Eukaryotes - 3041 (source: NCBI BLink). & (gnl|cdd|35370 : 125.0) no description available & (gnl|cdd|47687 : 82.6) no description available & (reliability: 828.0) & (original description: Putative nbp1, Description = Nucleic acid binding protein, PFAM = PF00076;PF00076;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01401_21584-27362' '(at2g45640 : 179.0) Involved in the regulation of salt stress. Expression of AtSAP18 is induced by NaCl, cold, drought, ABA, and ethylene treatment. AtSAP18 and HDA19 associate with ERF3 and ERF4 both in vitro and in vivo.; SIN3 associated polypeptide P18 (SAP18); FUNCTIONS IN: protein binding, transcription regulator activity; INVOLVED IN: response to salt stress, response to abscisic acid stimulus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sin3 associated polypeptide p18 (InterPro:IPR010516), Histone deacetylase complex, SAP18 subunit (InterPro:IPR017250). & (gnl|cdd|87099 : 169.0) no description available & (gnl|cdd|38601 : 147.0) no description available & (reliability: 358.0) & (original description: Putative At2g45640, Description = Histone deacetylase complex subunit SAP18, PFAM = PF06487)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01409_1319401-1326113' '(at1g07360 : 603.0) CCCH-type zinc fingerfamily protein with RNA-binding domain; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: CCCH-type zinc fingerfamily protein with RNA-binding domain (TAIR:AT2G29580.1); Has 18250 Blast hits to 13471 proteins in 794 species: Archae - 12; Bacteria - 1319; Metazoa - 6997; Fungi - 3518; Plants - 3570; Viruses - 267; Other Eukaryotes - 2567 (source: NCBI BLink). & (gnl|cdd|35375 : 464.0) no description available & (reliability: 1206.0) & (original description: Putative rbm22, Description = Pre-mRNA-splicing factor RBM22, PFAM = PF00076;PF16131)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01432_603059-616285' '(at2g23380 : 828.0) Similar to the product of the Polycomb-group gene Enhancer of zeste. Required for stable repression of AG and AP3. Putative role in cell fate determination. Involved in the control of leaf morphogenesis. mutants exhibit curled, involute leaves. AGAMOUS and APETALA3 are ectopically expressed in the mutant.; CURLY LEAF (CLF); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain-containing protein (TAIR:AT4G02020.1); Has 5951 Blast hits to 5285 proteins in 534 species: Archae - 0; Bacteria - 530; Metazoa - 2584; Fungi - 730; Plants - 989; Viruses - 16; Other Eukaryotes - 1102 (source: NCBI BLink). & (q8s4p6|ez1_maize : 781.0) Polycomb protein EZ1 (Enhancer of zeste protein 1) - Zea mays (Maize) & (gnl|cdd|36295 : 395.0) no description available & (gnl|cdd|47645 : 113.0) no description available & (reliability: 1656.0) & (original description: Putative CLF, Description = Histone-lysine N-methyltransferase CLF, PFAM = PF00856)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01453_944724-965052' '(at4g24630 : 496.0) DHHC-type zinc finger family protein; FUNCTIONS IN: receptor activity, zinc ion binding; INVOLVED IN: multicellular organismal development; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Plexin-like fold (InterPro:IPR016201); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G50020.2); Has 5142 Blast hits to 5136 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 2201; Fungi - 738; Plants - 841; Viruses - 0; Other Eukaryotes - 1362 (source: NCBI BLink). & (gnl|cdd|36525 : 237.0) no description available & (gnl|cdd|34870 : 132.0) no description available & (reliability: 992.0) & (original description: Putative PAT08, Description = Protein S-acyltransferase 8, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01455_211784-228310' '(at5g22480 : 694.0) ZPR1 zinc-finger domain protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, ZPR1-type (InterPro:IPR004457); BEST Arabidopsis thaliana protein match is: ZPR1 zinc-finger domain protein (TAIR:AT5G37340.3); Has 1143 Blast hits to 605 proteins in 280 species: Archae - 310; Bacteria - 0; Metazoa - 225; Fungi - 282; Plants - 53; Viruses - 0; Other Eukaryotes - 273 (source: NCBI BLink). & (gnl|cdd|37914 : 531.0) no description available & (gnl|cdd|47978 : 201.0) no description available & (reliability: 1364.0) & (original description: Putative zpr1, Description = Zinc finger protein ZPR1, PFAM = PF03367;PF03367)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01460_47227-51423' '(at1g68200 : 199.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G66810.1); Has 1170 Blast hits to 1062 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 455; Fungi - 97; Plants - 305; Viruses - 0; Other Eukaryotes - 313 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative At1g68200, Description = Zinc finger CCCH domain-containing protein 15, PFAM = PF00642)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01462_289172-292618' '(at2g33845 : 159.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT4G28440.1); Has 251 Blast hits to 251 proteins in 51 species: Archae - 23; Bacteria - 0; Metazoa - 2; Fungi - 4; Plants - 168; Viruses - 30; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative At4g28440, Description = Uncharacterized protein At4g28440, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01517_918360-922495' '(at1g33420 : 631.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G66170.1); Has 734 Blast hits to 722 proteins in 155 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 264; Plants - 211; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|37055 : 131.0) no description available & (reliability: 1262.0) & (original description: Putative At1g33420, Description = PHD finger protein At1g33420, PFAM = PF00628)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01523_112862-118970' '(at5g63830 : 419.0) HIT-type Zinc finger family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, HIT-type (InterPro:IPR007529); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39518 : 302.0) no description available & (reliability: 838.0) & (original description: Putative , Description = Leucine-rich receptor-like kinase family protein, putative, PFAM = PF04438)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01550_120298-130828' '(at4g27680 : 629.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G53540.1); Has 30260 Blast hits to 27737 proteins in 3108 species: Archae - 1486; Bacteria - 10702; Metazoa - 4856; Fungi - 3534; Plants - 2690; Viruses - 34; Other Eukaryotes - 6958 (source: NCBI BLink). & (gnl|cdd|35956 : 455.0) no description available & (gnl|cdd|30812 : 205.0) no description available & (p54774|cdc48_soybn : 165.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 1258.0) & (original description: Putative atad1, Description = ATPase family AAA domain-containing protein 1, PFAM = PF00004)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01553_245950-250498' '(at1g45207 : 187.0) Remorin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT4G36970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative PGSC0003DMG400004040, Description = Carboxy-terminal region remorin, PFAM = PF03763)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01559_368162-378195' '(at4g15080 : 748.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G22180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36525 : 145.0) no description available & (gnl|cdd|65336 : 93.1) no description available & (reliability: 1496.0) & (original description: Putative PAT19, Description = Probable protein S-acyltransferase 19, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01582_1310590-1319963' '(at1g32540 : 198.0) Encodes a protein with 3 plant-specific zinc finger domains that acts as a positive regulator of cell death.; lsd one like 1 (LOL1); FUNCTIONS IN: DNA binding; INVOLVED IN: induction of apoptosis; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735); BEST Arabidopsis thaliana protein match is: LSD1 zinc finger family protein (TAIR:AT4G20380.7); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative LOL1, Description = Protein LOL1, PFAM = PF06943;PF06943;PF06943)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01586_4384-8084' '(at1g64260 : 143.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 90.8) no description available & (reliability: 286.0) & (original description: Putative At1g06740, Description = Putative oxysterol-binding protein 5-like, PFAM = PF04434;PF03108;PF10551)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01587_363476-370112' '(at3g18620 : 358.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein with DHHC zinc finger domain (TAIR:AT2G14255.1); Has 4961 Blast hits to 4959 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 2163; Fungi - 692; Plants - 838; Viruses - 0; Other Eukaryotes - 1268 (source: NCBI BLink). & (gnl|cdd|36527 : 186.0) no description available & (gnl|cdd|34870 : 91.2) no description available & (reliability: 716.0) & (original description: Putative PAT11, Description = Protein S-acyltransferase 11, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01599_288375-291478' '(at1g21150 : 155.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 922 Blast hits to 791 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 903; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|66247 : 109.0) no description available & (gnl|cdd|36481 : 92.5) no description available & (reliability: 310.0) & (original description: Putative PGSC0003DMG400015070, Description = Putative ovule protein, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01612_207044-209421' '(at1g07130 : 161.0) Encodes a protein with similarity to yeast STN1, an OB fold protein involved in protecting yeast telomeres. In Arabidopsis, loss of STN1 function mutations exhibit gross morphological abnormalities and defects in telomere architecture and maintenance. STN1 likely plays a role in telomere end capping.; STN1; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: telomere capping; LOCATED IN: nuclear chromosome, telomeric region; EXPRESSED IN: root, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365); Has 110 Blast hits to 110 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 57; Fungi - 2; Plants - 47; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72955 : 84.6) no description available & (reliability: 322.0) & (original description: Putative STN1, Description = CST complex subunit STN1, PFAM = PF01336)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01634_162721-172263' '(at3g57170 : 444.0) N-acetylglucosaminyl transferase component family protein / Gpi1 family protein; FUNCTIONS IN: transferase activity, phosphatidylinositol N-acetylglucosaminyltransferase activity; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: N-acetylglucosaminyl transferase component (InterPro:IPR007720); Has 334 Blast hits to 333 proteins in 180 species: Archae - 0; Bacteria - 0; Metazoa - 114; Fungi - 132; Plants - 32; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|36397 : 303.0) no description available & (gnl|cdd|68593 : 174.0) no description available & (reliability: 888.0) & (original description: Putative BnaA09g36520D, Description = BnaA09g36520D protein, PFAM = PF05024)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01639_774812-781261' '(at1g03840 : 325.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 592.0) & (original description: Putative ENY, Description = Zinc finger protein MAGPIE, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01655_58673-63673' '(at4g00840 : 86.3) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G60800.1); Has 5117 Blast hits to 5115 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 766; Plants - 830; Viruses - 0; Other Eukaryotes - 1332 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative PAT12, Description = S-acyltransferase, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01655_60669-71229' '(at4g00840 : 338.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G60800.1); Has 5117 Blast hits to 5115 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 766; Plants - 830; Viruses - 0; Other Eukaryotes - 1332 (source: NCBI BLink). & (gnl|cdd|36529 : 214.0) no description available & (gnl|cdd|34870 : 122.0) no description available & (reliability: 676.0) & (original description: Putative PAT12, Description = Probable protein S-acyltransferase 12, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01655_63715-66612' '(gnl|cdd|36529 : 127.0) no description available & (at4g00840 : 119.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G60800.1); Has 5117 Blast hits to 5115 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 766; Plants - 830; Viruses - 0; Other Eukaryotes - 1332 (source: NCBI BLink). & (gnl|cdd|34870 : 99.7) no description available & (reliability: 238.0) & (original description: Putative REAM, Description = S-acyltransferase, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01655_297992-302708' '(at2g45820 : 96.3) Remorin family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G61260.1); Has 2543 Blast hits to 1840 proteins in 340 species: Archae - 2; Bacteria - 408; Metazoa - 392; Fungi - 191; Plants - 500; Viruses - 4; Other Eukaryotes - 1046 (source: NCBI BLink). & (p93788|remo_soltu : 92.0) Remorin (pp34) - Solanum tuberosum (Potato) & (reliability: 178.0) & (original description: Putative rem-2, Description = Remorin 2, PFAM = PF03763;PF03766)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01663_174-14473' '(at5g36740 : 473.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956), A.T hook-like (InterPro:IPR020478), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G36670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 946.0) & (original description: Putative IDM1, Description = Chromodomain-helicase-DNA-binding protein 4, PFAM = PF00628;PF16135)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01664_364723-372908' '(at1g20110 : 438.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT3G14270.1); Has 29282 Blast hits to 20083 proteins in 828 species: Archae - 11; Bacteria - 1932; Metazoa - 10999; Fungi - 6486; Plants - 4104; Viruses - 590; Other Eukaryotes - 5160 (source: NCBI BLink). & (gnl|cdd|47412 : 95.5) no description available & (gnl|cdd|36940 : 82.8) no description available & (reliability: 876.0) & (original description: Putative FREE1, Description = Protein FREE1, PFAM = PF01363)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01671_574036-584886' '(at1g49920 : 140.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (gnl|cdd|72786 : 96.9) no description available & (reliability: 274.0) & (original description: Putative Os06g0632700, Description = Os06g0632700 protein, PFAM = PF04434;PF03108;PF10551;PF00564)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01697_1691193-1694956' '(at1g32540 : 177.0) Encodes a protein with 3 plant-specific zinc finger domains that acts as a positive regulator of cell death.; lsd one like 1 (LOL1); FUNCTIONS IN: DNA binding; INVOLVED IN: induction of apoptosis; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735); BEST Arabidopsis thaliana protein match is: LSD1 zinc finger family protein (TAIR:AT4G20380.7); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative lsd1, Description = Protein LSD1, PFAM = PF06943;PF06943;PF06943)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01718_800910-804636' '(gnl|cdd|36553 : 122.0) no description available & (at3g18490 : 119.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G25510.1); Has 4095 Blast hits to 4076 proteins in 356 species: Archae - 0; Bacteria - 4; Metazoa - 1079; Fungi - 788; Plants - 1999; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative PGSC0003DMG400045930, Description = , PFAM = PF14543;PF14541)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01735_243718-247223' '(at2g44020 : 715.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT4G02990.1); Has 1566 Blast hits to 959 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 0; Plants - 1360; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|66247 : 307.0) no description available & (gnl|cdd|36481 : 156.0) no description available & (reliability: 1430.0) & (original description: Putative mTRF1, Description = Mitochondrial transcription termination factor family protein, PFAM = PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01739_449657-457717' '(at1g31040 : 246.0) PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT2G12646.1); Has 411 Blast hits to 411 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 411; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 176.0) no description available & (reliability: 492.0) & (original description: Putative Sb04g004830, Description = Putative uncharacterized protein Sb04g004830, PFAM = PF04640)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01749_470242-472757' '(gnl|cdd|38383 : 156.0) no description available & (at1g51200 : 155.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT2G36320.1). & (q9llx1|isap1_orysa : 104.0) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (reliability: 310.0) & (original description: Putative SAP8, Description = Zinc finger A20 and AN1 domain-containing stress-associated protein 8, PFAM = PF01754;PF01428)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01773_716236-719773' '(at3g62130 : 606.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT5G26600.1); Has 4302 Blast hits to 4302 proteins in 1284 species: Archae - 105; Bacteria - 2583; Metazoa - 32; Fungi - 216; Plants - 120; Viruses - 0; Other Eukaryotes - 1246 (source: NCBI BLink). & (gnl|cdd|36762 : 315.0) no description available & (gnl|cdd|30866 : 119.0) no description available & (reliability: 1212.0) & (original description: Putative LCD, Description = L-cysteine desulfhydrase, PFAM = PF00266)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01779_350532-365347' '(at4g26000 : 359.0) Encodes a novel Arabidopsis gene encoding a polypeptide with K-homology (KH) RNA-binding modules, which acts on vegetative growth and pistil development. Genetic studies suggest that PEP interacts with element(s) of the CLAVATA signaling pathway.; PEPPER (PEP); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: shoot development, gynoecium development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT3G04610.1); Has 2804 Blast hits to 2065 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 1818; Fungi - 225; Plants - 670; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|37401 : 156.0) no description available & (reliability: 718.0) & (original description: Putative BnaC08g12060D, Description = BnaC08g12060D protein, PFAM = PF00013;PF00013;PF00013)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01795_1252952-1260589' '(at1g43850 : 291.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 582.0) & (original description: Putative M7J2, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01812_502437-514602' '(at1g08680 : 348.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD14 belongs to the class 4, together with AGD15.; ARF GAP-like zinc finger-containing protein ZIGA4 (ZIGA4); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: NSP (nuclear shuttle protein)-interacting GTPase (TAIR:AT4G13350.2). & (gnl|cdd|35921 : 110.0) no description available & (gnl|cdd|85433 : 97.3) no description available & (reliability: 696.0) & (original description: Putative Os03g0323500, Description = Os03g0323500 protein, PFAM = PF01412)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01818_811449-817366' '(at3g26935 : 358.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G41060.1); Has 5153 Blast hits to 5144 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 2200; Fungi - 770; Plants - 850; Viruses - 0; Other Eukaryotes - 1333 (source: NCBI BLink). & (gnl|cdd|36525 : 220.0) no description available & (gnl|cdd|34870 : 128.0) no description available & (reliability: 716.0) & (original description: Putative PAT06, Description = Probable protein S-acyltransferase 6, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01819_233475-238797' '(at2g02160 : 300.0) CCCH-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 10885 Blast hits to 7444 proteins in 511 species: Archae - 23; Bacteria - 415; Metazoa - 5228; Fungi - 922; Plants - 581; Viruses - 184; Other Eukaryotes - 3532 (source: NCBI BLink). & (gnl|cdd|39988 : 175.0) no description available & (reliability: 600.0) & (original description: Putative PGSC0003DMG400016400, Description = Zinc finger CCCH domain-containing protein 17, PFAM = PF00642;PF15663)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01819_239673-249933' '(at2g02170 : 345.0) Remorin family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT1G30320.1); Has 3690 Blast hits to 2594 proteins in 496 species: Archae - 6; Bacteria - 904; Metazoa - 645; Fungi - 344; Plants - 595; Viruses - 5; Other Eukaryotes - 1191 (source: NCBI BLink). & (gnl|cdd|67381 : 116.0) no description available & (reliability: 690.0) & (original description: Putative At1g30320, Description = Remorin family protein, PFAM = PF03763)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01822_1673427-1677651' '(at4g02220 : 167.0) zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Programmed cell death protein 2, C-terminal (InterPro:IPR007320), Zinc finger, MYND-type (InterPro:IPR002893); BEST Arabidopsis thaliana protein match is: programmed cell death 2 C-terminal domain-containing protein (TAIR:AT5G64830.1); Has 934 Blast hits to 894 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 394; Fungi - 162; Plants - 228; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|37272 : 127.0) no description available & (gnl|cdd|67794 : 97.6) no description available & (reliability: 334.0) & (original description: Putative PDCD2, Description = Programmed cell death protein 2, PFAM = PF04194)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01824_155806-161437' '(p93788|remo_soltu : 102.0) Remorin (pp34) - Solanum tuberosum (Potato) & (at3g61260 : 95.1) Remorin family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT2G45820.1); Has 8155 Blast hits to 5353 proteins in 884 species: Archae - 12; Bacteria - 2269; Metazoa - 1454; Fungi - 651; Plants - 718; Viruses - 174; Other Eukaryotes - 2877 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative REM2, Description = Remorin 2, PFAM = PF03763)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01826_239936-246081' '(at5g63280 : 310.0) C2H2-like zinc finger protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT5G40710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 620.0) & (original description: Putative C2H2L3, Description = C2H2L domain class transcription factor, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01826_733652-744990' '(at3g48440 : 334.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G63260.1); Has 1758 Blast hits to 1034 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 389; Fungi - 243; Plants - 962; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (q5jlb5|zfnl2_orysa : 224.0) Zinc finger CCCH domain-containing protein ZFN-like 2 - Oryza sativa (Rice) & (gnl|cdd|36890 : 117.0) no description available & (reliability: 668.0) & (original description: Putative BnaC03g51070D, Description = BnaC03g51070D protein, PFAM = PF14608;PF00642;PF00642;PF00642;PF00642)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01847_878226-880801' '(p27484|grp2_nicsy : 135.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at2g21060 : 97.4) glycine-rich protein (AtGRP2b); glycine-rich protein 2B (GRP2B); FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Cold shock protein (InterPro:IPR011129), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine rich protein 2 (TAIR:AT4G38680.1); Has 124576 Blast hits to 52040 proteins in 3306 species: Archae - 178; Bacteria - 46955; Metazoa - 35565; Fungi - 6939; Plants - 11254; Viruses - 1676; Other Eukaryotes - 22009 (source: NCBI BLink). & (gnl|cdd|36139 : 81.9) no description available & (gnl|cdd|84686 : 81.8) no description available & (reliability: 193.4) & (original description: Putative nab1, Description = Cold shock domain protein 1, PFAM = PF00313;PF00098)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01876_29903-43304' '(at2g30580 : 377.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 2 (DRIP2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 1 (TAIR:AT1G06770.1); Has 1631 Blast hits to 1626 proteins in 163 species: Archae - 0; Bacteria - 2; Metazoa - 1227; Fungi - 58; Plants - 232; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|37871 : 125.0) no description available & (reliability: 690.0) & (original description: Putative DRIP2, Description = E3 ubiquitin protein ligase DRIP2, PFAM = PF13923)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01887_756672-763685' '(at1g47490 : 365.0) RNA-binding protein 47C (RBP47C); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47C' (TAIR:AT1G47500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35370 : 127.0) no description available & (gnl|cdd|31068 : 96.3) no description available & (reliability: 730.0) & (original description: Putative nbp1, Description = Polyadenylate-binding protein RBP47C, PFAM = PF00076;PF00076;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01933_1484873-1499941' '(at3g54826 : 153.0) Zim17-type zinc finger protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Zim17-type (InterPro:IPR007853); Has 403 Blast hits to 403 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 114; Fungi - 127; Plants - 101; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|38487 : 89.7) no description available & (gnl|cdd|72806 : 81.9) no description available & (reliability: 306.0) & (original description: Putative Os02g0819700, Description = Os02g0819700 protein, PFAM = PF05180)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01985_485236-490440' '(gnl|cdd|39379 : 125.0) no description available & (gnl|cdd|29261 : 106.0) no description available & (at2g03430 : 91.3) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat protein (TAIR:AT5G66055.1); Has 130068 Blast hits to 38689 proteins in 1585 species: Archae - 162; Bacteria - 14649; Metazoa - 59864; Fungi - 13189; Plants - 7735; Viruses - 2061; Other Eukaryotes - 32408 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 83.2) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 174.8) & (original description: Putative Vpyl, Description = Ankyrin repeat, PH and SEC7 domain secG-like protein, PFAM = PF12796;PF12796;PF12796)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf01998_777379-781941' '(at1g03840 : 328.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 610.0) & (original description: Putative C2H2L12, Description = C2H2L domain class transcription factor, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02001_221571-229859' '(at1g20110 : 374.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT3G14270.1); Has 29282 Blast hits to 20083 proteins in 828 species: Archae - 11; Bacteria - 1932; Metazoa - 10999; Fungi - 6486; Plants - 4104; Viruses - 590; Other Eukaryotes - 5160 (source: NCBI BLink). & (gnl|cdd|47412 : 88.6) no description available & (reliability: 748.0) & (original description: Putative FREE1, Description = Os07g0573300 protein, PFAM = PF01363)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02008_1567-4769' '(at1g55460 : 500.0) DNA/RNA-binding protein Kin17, conserved region; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), DNA/RNA-binding protein Kin17, conserved region (InterPro:IPR019447), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: DNA/RNA-binding protein Kin17, conserved region (TAIR:AT5G51795.1); Has 1885 Blast hits to 1561 proteins in 251 species: Archae - 4; Bacteria - 25; Metazoa - 715; Fungi - 242; Plants - 160; Viruses - 13; Other Eukaryotes - 726 (source: NCBI BLink). & (gnl|cdd|38048 : 313.0) no description available & (reliability: 1000.0) & (original description: Putative KIN, Description = DNA/RNA-binding protein KIN17, PFAM = PF10357)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02021_113584-118255' '(at3g63140 : 586.0) Encodes a protein with ribonuclease activity that is involved in plastid rRNA maturation.; chloroplast stem-loop binding protein of 41 kDa (CSP41A); FUNCTIONS IN: mRNA binding, poly(U) RNA binding; INVOLVED IN: rRNA processing; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: chloroplast RNA binding (TAIR:AT1G09340.1); Has 1047 Blast hits to 1047 proteins in 372 species: Archae - 70; Bacteria - 649; Metazoa - 6; Fungi - 5; Plants - 106; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|30800 : 84.2) no description available & (reliability: 1172.0) & (original description: Putative CSP41A, Description = Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic, PFAM = PF01370)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02042_365543-371933' '(at1g03840 : 282.0) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.; Magpie (MGP); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G44160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative MdZF1, Description = Zinc finger protein, PFAM = PF00096)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02066_145401-154219' '(at3g48670 : 473.0) Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway.; INVOLVED IN DE NOVO 2 (IDN2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion, chromatin silencing, DNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379), Domain of unknown function, putative Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT3G12550.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67105 : 164.0) no description available & (reliability: 852.0) & (original description: Putative At5g59390, Description = Transcription regulator-like, PFAM = PF03469;PF03468;PF03470;PF03470;PF03470;PF03470;PF03470;PF03470;PF03470;PF03470)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02164_617548-624263' '(at1g07840 : 232.0) Sas10/Utp3/C1D family; CONTAINS InterPro DOMAIN/s: Sas10/Utp3/C1D (InterPro:IPR007146); BEST Arabidopsis thaliana protein match is: Sas10/U3 ribonucleoprotein (Utp) family protein (TAIR:AT2G43650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38327 : 99.0) no description available & (reliability: 464.0) & (original description: Putative At1g07840, Description = AT1G07840 protein, PFAM = PF04000)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02237_84746-89940' '(at4g38170 : 527.0) FAR1-related sequence 9 (FRS9); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PMZ-type (InterPro:IPR006564), MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 5 (TAIR:AT4G38180.1); Has 1073 Blast hits to 1051 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 2; Plants - 1067; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1054.0) & (original description: Putative FRS9, Description = Protein FAR1-RELATED SEQUENCE 9, PFAM = PF04434;PF10551)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02255_78968-82064' '(at1g64260 : 86.3) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative , Description = Putative ovule protein, PFAM = PF04434;PF10551)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02268_7420-15563' '(at4g39870 : 343.0) TLD-domain containing nucleolar protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TLDc (InterPro:IPR006571); BEST Arabidopsis thaliana protein match is: TLD-domain containing nucleolar protein (TAIR:AT2G05590.2). & (gnl|cdd|37583 : 150.0) no description available & (gnl|cdd|87300 : 133.0) no description available & (reliability: 686.0) & (original description: Putative LOC100192992, Description = TLDc, PFAM = PF07534)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02272_23193-27111' '(at1g64260 : 150.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 98.9) no description available & (reliability: 300.0) & (original description: Putative Sb03g002010, Description = Putative uncharacterized protein Sb03g002010, PFAM = PF03108;PF10551;PF04434)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02291_290273-305428' '(at1g77060 : 502.0) Phosphoenolpyruvate carboxylase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Isocitrate lyase/phosphorylmutase, conserved site (InterPro:IPR018523), Isocitrate lyase/phosphorylmutase (InterPro:IPR000918); BEST Arabidopsis thaliana protein match is: Phosphoenolpyruvate carboxylase family protein (TAIR:AT1G21440.1); Has 8811 Blast hits to 8811 proteins in 1498 species: Archae - 116; Bacteria - 4944; Metazoa - 32; Fungi - 514; Plants - 174; Viruses - 0; Other Eukaryotes - 3031 (source: NCBI BLink). & (q05957|cppm_diaca : 365.0) Putative carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) (Carboxyphosphonoenolpyruvate phosphonomutase) (CPEP phosphonomutase) (PSR132) - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|32583 : 257.0) no description available & (gnl|cdd|36474 : 193.0) no description available & (reliability: 1004.0) & (original description: Putative bcpA, Description = Carboxyvinyl-carboxyphosphonate phosphorylmutase, PFAM = PF13714)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02303_71017-81673' '(at1g07705 : 637.0) NOT2 / NOT3 / NOT5 family; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282); BEST Arabidopsis thaliana protein match is: VIRE2 interacting protein 2 (TAIR:AT5G59710.1); Has 3259 Blast hits to 2610 proteins in 429 species: Archae - 0; Bacteria - 983; Metazoa - 821; Fungi - 441; Plants - 185; Viruses - 8; Other Eukaryotes - 821 (source: NCBI BLink). & (gnl|cdd|86562 : 197.0) no description available & (gnl|cdd|37361 : 97.4) no description available & (reliability: 1220.0) & (original description: Putative VIP2, Description = Probable NOT transcription complex subunit VIP2, PFAM = PF04153)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02354_1050028-1057743' '(at4g32720 : 358.0) Encodes AtLa1, a member of the highly abundant phosphoprotein La proteins. Predominantly localized to the nucleoplasm and was also detected in the nucleolar cavity. Has RNA binding activity. Required for normal ribosome biogenesis and embryogenesis.; La protein 1 (La1); FUNCTIONS IN: RNA binding; INVOLVED IN: embryo development, ribosome biogenesis; LOCATED IN: nucleoplasm, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA-binding motif (InterPro:IPR014886); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT1G79880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47984 : 82.2) no description available & (gnl|cdd|37066 : 80.9) no description available & (reliability: 716.0) & (original description: Putative Os02g0610400, Description = Os02g0610400 protein, PFAM = PF00076;PF08777;PF05383)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02360_109106-115983' '(at4g06634 : 379.0) zinc finger (C2H2 type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, C2H2-type/integrase, DNA-binding (InterPro:IPR013087); BEST Arabidopsis thaliana protein match is: Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein (TAIR:AT5G04240.1). & (reliability: 758.0) & (original description: Putative pho, Description = Transcriptional repressor protein YY1, PFAM = PF00096;PF00096;PF00096;PF00096)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02361_344525-354443' '(at4g22910 : 643.0) FIZZY-related 2 (FZR2); FUNCTIONS IN: signal transducer activity; INVOLVED IN: trichome branching, signal transduction, DNA endoreduplication, cell growth; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: cell cycle switch protein 52 A2 (TAIR:AT4G11920.1); Has 43458 Blast hits to 22953 proteins in 693 species: Archae - 46; Bacteria - 6865; Metazoa - 16440; Fungi - 9775; Plants - 5102; Viruses - 0; Other Eukaryotes - 5230 (source: NCBI BLink). & (gnl|cdd|35526 : 472.0) no description available & (gnl|cdd|29257 : 138.0) no description available & (reliability: 1248.0) & (original description: Putative FZR2, Description = Protein FIZZY-RELATED 2, PFAM = PF12894;PF00400;PF00400;PF00400)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02384_117731-121555' '(at2g33845 : 159.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT4G28440.1); Has 251 Blast hits to 251 proteins in 51 species: Archae - 23; Bacteria - 0; Metazoa - 2; Fungi - 4; Plants - 168; Viruses - 30; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative At1g10590, Description = DNA-binding family protein, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02423_262410-276187' '(at3g21480 : 330.0) BRCT domain-containing DNA repair protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: BRCT domain-containing DNA repair protein (TAIR:AT4G03130.1); Has 730 Blast hits to 680 proteins in 204 species: Archae - 4; Bacteria - 146; Metazoa - 309; Fungi - 49; Plants - 100; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|37254 : 152.0) no description available & (reliability: 660.0) & (original description: Putative , Description = PAX-interacting protein 1, PFAM = PF16770)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02429_496904-500016' '(at1g21150 : 123.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 922 Blast hits to 791 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 903; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|36481 : 100.0) no description available & (gnl|cdd|66247 : 99.6) no description available & (reliability: 246.0) & (original description: Putative PGSC0003DMG400016579, Description = Putative ovule protein, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02437_214992-234243' '(at1g75340 : 166.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571). & (reliability: 332.0) & (original description: Putative NbCG1b, Description = Nuclear pore complex protein CG1b, PFAM = PF00642)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02509_1070318-1072857' '(at3g12630 : 152.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT2G36320.1); Has 1013 Blast hits to 1009 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 428; Fungi - 9; Plants - 446; Viruses - 6; Other Eukaryotes - 124 (source: NCBI BLink). & (q9llx1|isap1_orysa : 132.0) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (gnl|cdd|38383 : 127.0) no description available & (reliability: 304.0) & (original description: Putative SAP5, Description = Zinc finger A20 and AN1 domain-containing stress-associated protein 5, PFAM = PF01428;PF01754)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02541_872239-879044' '(gnl|cdd|69947 : 441.0) no description available & (at4g21790 : 428.0) encodes a host factor that is required for TMV virus multiplication.; tobamovirus multiplication 1 (TOM1); INVOLVED IN: viral replication complex formation and maintenance; LOCATED IN: vacuolar membrane, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: tobamovirus multiplication protein 3 (TAIR:AT2G02180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 856.0) & (original description: Putative tom1, Description = Tobamovirus multiplication protein 3, PFAM = PF06454)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02541_883577-886344' '(at4g27000 : 147.0) ATRBP45C; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35370 : 82.7) no description available & (reliability: 294.0) & (original description: Putative nbp1, Description = Polyadenylate-binding protein RBP47B, PFAM = PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02549_205194-224236' '(at2g02080 : 296.0) indeterminate(ID)-domain 4 (IDD4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT1G14580.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 592.0) & (original description: Putative BnaA06g34340D, Description = BnaA06g34340D protein, PFAM = PF00096)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02583_690083-692913' '(at4g36020 : 91.3) Encodes a cold shock domain protein. Involved in cold acclimation by blocking the secondary structure of mRNA which in turn facilitates translation at cold temperature.; cold shock domain protein 1 (CSDP1); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Cold shock protein (InterPro:IPR011129), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: cold shock domain protein 3 (TAIR:AT2G17870.1); Has 93964 Blast hits to 39618 proteins in 2725 species: Archae - 55; Bacteria - 19157; Metazoa - 4501; Fungi - 1919; Plants - 2885; Viruses - 60267; Other Eukaryotes - 5180 (source: NCBI BLink). & (gnl|cdd|84686 : 84.1) no description available & (reliability: 182.6) & (original description: Putative cspA, Description = Glycine-rich protein 2, PFAM = PF00098;PF00098;PF00098;PF00313)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02615_61404-67923' '(at1g09920 : 230.0) TRAF-type zinc finger-related; BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT4G15420.1); Has 897 Blast hits to 860 proteins in 162 species: Archae - 0; Bacteria - 0; Metazoa - 570; Fungi - 106; Plants - 68; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative BnaC05g07400D, Description = TRAF-type zinc finger protein, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02658_185191-188189' '(p27484|grp2_nicsy : 100.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at2g21060 : 87.0) glycine-rich protein (AtGRP2b); glycine-rich protein 2B (GRP2B); FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Cold shock protein (InterPro:IPR011129), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine rich protein 2 (TAIR:AT4G38680.1); Has 124576 Blast hits to 52040 proteins in 3306 species: Archae - 178; Bacteria - 46955; Metazoa - 35565; Fungi - 6939; Plants - 11254; Viruses - 1676; Other Eukaryotes - 22009 (source: NCBI BLink). & (gnl|cdd|84686 : 85.6) no description available & (reliability: 162.6) & (original description: Putative cspA, Description = Glycine-rich protein 2, PFAM = PF00098;PF00313)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02659_318381-321682' '(at1g09750 : 452.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G54400.1); Has 2762 Blast hits to 2753 proteins in 256 species: Archae - 0; Bacteria - 2; Metazoa - 415; Fungi - 350; Plants - 1861; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink). & (gnl|cdd|36553 : 197.0) no description available & (reliability: 904.0) & (original description: Putative cpa63, Description = Aspartic proteinase nepenthesin-1, PFAM = PF14541;PF14543)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02668_2335-7534' '(at5g12440 : 315.0) CCCH-type zinc fingerfamily protein with RNA-binding domain; FUNCTIONS IN: nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G21100.2). & (reliability: 630.0) & (original description: Putative Os07g0682400, Description = Zinc finger CCCH domain-containing protein 53, PFAM = PF00642;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02700_168316-172055' '(at4g26400 : 84.7) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G56340.1); Has 10466 Blast hits to 10426 proteins in 293 species: Archae - 0; Bacteria - 6; Metazoa - 2695; Fungi - 997; Plants - 5209; Viruses - 70; Other Eukaryotes - 1489 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative PGSC0003DMG400018972, Description = E3 ubiquitin-protein ligase RING1-like protein, PFAM = PF13639)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02720_1043379-1046638' '(at1g23280 : 229.0) MAK16 protein-related; CONTAINS InterPro DOMAIN/s: Mak16 protein (InterPro:IPR006958); Has 4868 Blast hits to 3538 proteins in 334 species: Archae - 9; Bacteria - 248; Metazoa - 1831; Fungi - 653; Plants - 272; Viruses - 128; Other Eukaryotes - 1727 (source: NCBI BLink). & (gnl|cdd|38274 : 217.0) no description available & (gnl|cdd|68448 : 209.0) no description available & (reliability: 458.0) & (original description: Putative v1g121253, Description = Predicted protein, PFAM = PF01778)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02723_35966-41331' '(at4g31540 : 254.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein G1 (EXO70G1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, exocyst; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein G2 (TAIR:AT1G51640.1); Has 805 Blast hits to 799 proteins in 127 species: Archae - 0; Bacteria - 1; Metazoa - 136; Fungi - 99; Plants - 561; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|37555 : 236.0) no description available & (gnl|cdd|86233 : 209.0) no description available & (reliability: 508.0) & (original description: Putative TCM_034688, Description = Exocyst subunit exo70 family protein G1, PFAM = PF03081)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02732_153027-164011' '(at5g15810 : 879.0) N2,N2-dimethylguanosine tRNA methyltransferase; FUNCTIONS IN: RNA binding, tRNA (guanine-N2-)-methyltransferase activity; INVOLVED IN: tRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: N2,N2-dimethylguanosine tRNA methyltransferase (InterPro:IPR002905); BEST Arabidopsis thaliana protein match is: N2,N2-dimethylguanosine tRNA methyltransferase (TAIR:AT3G02320.1); Has 1017 Blast hits to 963 proteins in 359 species: Archae - 255; Bacteria - 70; Metazoa - 198; Fungi - 150; Plants - 103; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink). & (gnl|cdd|36467 : 624.0) no description available & (gnl|cdd|85826 : 349.0) no description available & (reliability: 1758.0) & (original description: Putative trmt1, Description = tRNA (Guanine(26)-N(2))-dimethyltransferase, PFAM = PF02005)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02744_32350-39869' '(at1g23280 : 292.0) MAK16 protein-related; CONTAINS InterPro DOMAIN/s: Mak16 protein (InterPro:IPR006958); Has 4868 Blast hits to 3538 proteins in 334 species: Archae - 9; Bacteria - 248; Metazoa - 1831; Fungi - 653; Plants - 272; Viruses - 128; Other Eukaryotes - 1727 (source: NCBI BLink). & (gnl|cdd|38274 : 288.0) no description available & (gnl|cdd|68448 : 278.0) no description available & (reliability: 584.0) & (original description: Putative Mak16, Description = Protein MAK16 homolog, PFAM = PF01778;PF04874)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02753_137061-142817' '(at3g09210 : 341.0) plastid transcriptionally active 13 (PTAC13); FUNCTIONS IN: transcription elongation regulator activity; INVOLVED IN: positive regulation of RNA elongation from RNA polymerase II promoter; LOCATED IN: plastid chromosome, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Transcription antitermination protein, NusG, N-terminal (InterPro:IPR006645), Translation protein SH3-like, subgroup (InterPro:IPR014722), KOW (InterPro:IPR005824); Has 3797 Blast hits to 3795 proteins in 1334 species: Archae - 0; Bacteria - 2562; Metazoa - 0; Fungi - 2; Plants - 31; Viruses - 0; Other Eukaryotes - 1202 (source: NCBI BLink). & (gnl|cdd|48005 : 80.0) no description available & (reliability: 682.0) & (original description: Putative PTAC, Description = Plastid transcriptionally active, PFAM = PF02357)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02830_362872-366083' '(at5g07900 : 167.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT1G21150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36481 : 87.5) no description available & (gnl|cdd|66247 : 80.0) no description available & (reliability: 334.0) & (original description: Putative PGSC0003DMG400007323, Description = , PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02831_692982-697051' '(at1g55110 : 296.0) indeterminate(ID)-domain 7 (IDD7); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 11 (TAIR:AT3G13810.1); Has 54650 Blast hits to 21530 proteins in 476 species: Archae - 0; Bacteria - 0; Metazoa - 51826; Fungi - 384; Plants - 807; Viruses - 2; Other Eukaryotes - 1631 (source: NCBI BLink). & (reliability: 554.0) & (original description: Putative C2H2L12, Description = C2H2L domain class transcription factor, PFAM = PF00096)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02837_864459-868627' '(at1g53490 : 355.0) RING/U-box superfamily protein; Has 175 Blast hits to 173 proteins in 83 species: Archae - 2; Bacteria - 14; Metazoa - 69; Fungi - 24; Plants - 38; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 710.0) & (original description: Putative HEI10, Description = E3 ubiquitin-protein ligase CCNB1IP1 homolog, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02910_112145-118538' '(p93788|remo_soltu : 137.0) Remorin (pp34) - Solanum tuberosum (Potato) & (at3g48940 : 104.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT5G23750.2); Has 1837 Blast hits to 1261 proteins in 238 species: Archae - 1; Bacteria - 261; Metazoa - 152; Fungi - 115; Plants - 477; Viruses - 0; Other Eukaryotes - 831 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative DBP, Description = Remorin, PFAM = PF03766;PF03763)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf02996_245805-249559' '(at5g13150 : 535.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein C1 (EXO70C1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein C2 (TAIR:AT5G13990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37555 : 443.0) no description available & (gnl|cdd|86233 : 342.0) no description available & (reliability: 1070.0) & (original description: Putative BnaA03g04210D, Description = BnaA03g04210D protein, PFAM = PF03081)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03018_748286-750759' '(at3g12630 : 145.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT2G36320.1); Has 1013 Blast hits to 1009 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 428; Fungi - 9; Plants - 446; Viruses - 6; Other Eukaryotes - 124 (source: NCBI BLink). & (q9llx1|isap1_orysa : 128.0) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (gnl|cdd|38383 : 126.0) no description available & (reliability: 290.0) & (original description: Putative SAP1, Description = Zinc finger A20 and AN1 domain-containing stress-associated protein 1, PFAM = PF01428;PF01754)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03035_8262-12116' '(at2g33845 : 172.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT4G28440.1); Has 251 Blast hits to 251 proteins in 51 species: Archae - 23; Bacteria - 0; Metazoa - 2; Fungi - 4; Plants - 168; Viruses - 30; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative Os01g0754100, Description = DNA-binding protein-related-like, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03060_194190-197086' '(at1g09950 : 132.0) RESPONSE TO ABA AND SALT 1 (RAS1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, root, flower, leaf; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT1G58330.1); Has 520 Blast hits to 520 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 520; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative PGSC0003DMG400004967, Description = , PFAM = PF14144)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03104_445746-460069' '(at1g11650 : 422.0) RBP45B; FUNCTIONS IN: RNA binding; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 29660 Blast hits to 18296 proteins in 811 species: Archae - 14; Bacteria - 2273; Metazoa - 15265; Fungi - 3531; Plants - 5870; Viruses - 0; Other Eukaryotes - 2707 (source: NCBI BLink). & (gnl|cdd|35370 : 137.0) no description available & (gnl|cdd|31068 : 92.4) no description available & (p19682|roc3_nicsy : 87.8) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (reliability: 844.0) & (original description: Putative nbp1, Description = Polyadenylate-binding protein RBP47B, PFAM = PF00076;PF00076;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03128_174689-186800' '(at1g19860 : 213.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G66270.1); Has 210 Blast hits to 187 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 12; Plants - 160; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative At1g19860, Description = Zinc finger CCCH domain-containing protein 6, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03156_55202-65540' '(at5g58470 : 155.0) TBP-associated factor 15B (TAF15b); FUNCTIONS IN: binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: TBP-associated factor 15 (TAIR:AT1G50300.1); Has 115051 Blast hits to 45140 proteins in 2321 species: Archae - 166; Bacteria - 28654; Metazoa - 42717; Fungi - 9006; Plants - 12716; Viruses - 1451; Other Eukaryotes - 20341 (source: NCBI BLink). & (gnl|cdd|36139 : 88.8) no description available & (reliability: 310.0) & (original description: Putative BnaAnng16380D, Description = BnaAnng16380D protein, PFAM = PF00641;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03171_331556-342435' '(at1g64260 : 146.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 99.3) no description available & (reliability: 292.0) & (original description: Putative At3g04605, Description = Putative muDR family transposase-like, PFAM = PF03108;PF04434;PF10551;PF00564)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03184_88094-97793' '(at4g26000 : 414.0) Encodes a novel Arabidopsis gene encoding a polypeptide with K-homology (KH) RNA-binding modules, which acts on vegetative growth and pistil development. Genetic studies suggest that PEP interacts with element(s) of the CLAVATA signaling pathway.; PEPPER (PEP); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: shoot development, gynoecium development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT3G04610.1); Has 2804 Blast hits to 2065 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 1818; Fungi - 225; Plants - 670; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|37401 : 162.0) no description available & (reliability: 828.0) & (original description: Putative PEP, Description = RNA-binding KH domain-containing protein PEPPER, PFAM = PF00013;PF00013;PF00013)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03184_809628-812623' '(at2g23945 : 102.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT4G30030.1); Has 2014 Blast hits to 2006 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 158; Fungi - 70; Plants - 1675; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative , Description = , PFAM = PF14543)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03224_587171-592797' '(at1g15910 : 537.0) XH/XS domain-containing protein; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379), Domain of unknown function, putative Zinc finger, XS/XH (InterPro:IPR005381); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT4G00380.1); Has 48628 Blast hits to 29972 proteins in 1836 species: Archae - 567; Bacteria - 5701; Metazoa - 24120; Fungi - 3416; Plants - 1878; Viruses - 163; Other Eukaryotes - 12783 (source: NCBI BLink). & (gnl|cdd|67106 : 163.0) no description available & (reliability: 1050.0) & (original description: Putative FDM1, Description = Factor of DNA methylation 1, PFAM = PF03468;PF03470;PF03469)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03240_188602-191948' '(at1g66180 : 551.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G37540.1); Has 1897 Blast hits to 1884 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 164; Plants - 1696; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|36553 : 196.0) no description available & (reliability: 1052.0) & (original description: Putative BnaC04g55960D, Description = BnaC04g55960D protein, PFAM = PF14543;PF14541)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03271_234680-239416' '(at5g55580 : 516.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT1G78930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36481 : 122.0) no description available & (gnl|cdd|66247 : 104.0) no description available & (reliability: 1032.0) & (original description: Putative MTERF9, Description = Transcription termination factor MTERF9, chloroplastic, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03295_1085400-1087915' '(at1g51200 : 154.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT2G36320.1). & (gnl|cdd|38383 : 149.0) no description available & (q9llx1|isap1_orysa : 102.0) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (reliability: 308.0) & (original description: Putative SAP8, Description = Zinc finger A20 and AN1 domain-containing stress-associated protein 8, PFAM = PF01428;PF01754)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03337_246359-249493' '(at3g60670 : 242.0) PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT2G12646.1); Has 407 Blast hits to 407 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 407; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 159.0) no description available & (reliability: 484.0) & (original description: Putative ZOSMA_74G00570, Description = PLATZ transcription factor family protein, PFAM = PF04640)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03340_626282-629872' '(at2g44020 : 710.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT4G02990.1); Has 1566 Blast hits to 959 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 0; Plants - 1360; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|66247 : 311.0) no description available & (gnl|cdd|36481 : 157.0) no description available & (reliability: 1420.0) & (original description: Putative mTRF1, Description = Mitochondrial transcription termination factor family protein, PFAM = PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03351_200012-205982' '(at5g13240 : 330.0) transcription regulators; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: negative regulation of transcription from RNA polymerase III promoter; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Maf1 regulator (InterPro:IPR015257), RNA polymerase III transcriptional repressor, MAF1 (InterPro:IPR017152); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72591 : 172.0) no description available & (gnl|cdd|38314 : 157.0) no description available & (reliability: 660.0) & (original description: Putative MAF1, Description = Repressor of RNA polymerase III transcription, PFAM = PF09174)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03371_7528-13098' '(at3g26935 : 629.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G41060.1); Has 5153 Blast hits to 5144 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 2200; Fungi - 770; Plants - 850; Viruses - 0; Other Eukaryotes - 1333 (source: NCBI BLink). & (gnl|cdd|36525 : 253.0) no description available & (gnl|cdd|34870 : 136.0) no description available & (reliability: 1258.0) & (original description: Putative PAT07, Description = Probable protein S-acyltransferase 7, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03374_210041-215859' '(at3g60670 : 177.0) PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT2G12646.1); Has 407 Blast hits to 407 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 407; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 138.0) no description available & (reliability: 354.0) & (original description: Putative PHYPADRAFT_228346, Description = Predicted protein, PFAM = PF04640)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03374_210073-214269' '(at3g60670 : 175.0) PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT2G12646.1); Has 407 Blast hits to 407 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 407; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 138.0) no description available & (reliability: 350.0) & (original description: Putative At2g01818, Description = PLATZ transcription factor family protein, PFAM = PF04640)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03432_57016-88105' '(gnl|cdd|72855 : 208.0) no description available & (at5g11470 : 189.0) bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Bromo adjacent homology (BAH) domain (InterPro:IPR001025); BEST Arabidopsis thaliana protein match is: nucleic acid binding (TAIR:AT3G15605.4); Has 602 Blast hits to 478 proteins in 106 species: Archae - 0; Bacteria - 17; Metazoa - 295; Fungi - 38; Plants - 91; Viruses - 4; Other Eukaryotes - 157 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative pco136762b, Description = Bromo-adjacent-like (BAH) domain protein, PFAM = PF01426)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03435_84915-91570' '(at1g60560 : 1112.0) SWIM zinc finger family protein; BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT4G13970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 2224.0) & (original description: Putative BnaA01g22430D, Description = BnaA01g22430D protein, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03436_387930-390619' '(at5g33340 : 130.0) Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation.; CONSTITUTIVE DISEASE RESISTANCE 1 (CDR1); CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G64830.1); Has 3792 Blast hits to 3768 proteins in 339 species: Archae - 0; Bacteria - 0; Metazoa - 807; Fungi - 843; Plants - 1930; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink). & (gnl|cdd|36553 : 102.0) no description available & (reliability: 260.0) & (original description: Putative AP51, Description = Aspartic proteinase nepenthesin-1, PFAM = PF14541;PF14543)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03444_332935-338413' '(at5g40660 : 365.0) ATP12 protein-related; INVOLVED IN: proton-transporting ATP synthase complex assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP12, ATPase F1F0-assembly protein (InterPro:IPR011419); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38225 : 255.0) no description available & (gnl|cdd|70990 : 142.0) no description available & (reliability: 730.0) & (original description: Putative BnaA04g10520D, Description = BnaA04g10520D protein, PFAM = PF07542)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03444_333491-338362' '(at5g40660 : 134.0) ATP12 protein-related; INVOLVED IN: proton-transporting ATP synthase complex assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP12, ATPase F1F0-assembly protein (InterPro:IPR011419); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38225 : 121.0) no description available & (reliability: 268.0) & (original description: Putative At5g40660, Description = ATP synthase mitochondrial F1 complex assembly factor 2, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03461_7275-13765' '(at1g26660 : 154.0) Prefoldin chaperone subunit family protein; FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin alpha-like (InterPro:IPR004127), Prefoldin (InterPro:IPR009053). & (gnl|cdd|38257 : 82.5) no description available & (reliability: 308.0) & (original description: Putative Sb02g038240, Description = Putative uncharacterized protein Sb02g038240, PFAM = PF02996)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03461_223050-230237' '(at1g69420 : 605.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT4G15080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36525 : 137.0) no description available & (gnl|cdd|65336 : 89.2) no description available & (reliability: 1210.0) & (original description: Putative PAT22, Description = Probable protein S-acyltransferase 22, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03463_202454-218296' '(at5g37055 : 203.0) Encodes SERRATED LEAVES AND EARLY FLOWERING (SEF), an Arabidopsis homolog of the yeast SWC6 protein, a conserved subunit of the SWR1/SRCAP complex. SEF loss-of-function mutants have a pleiotropic phenotype characterized by serrated leaves, frequent absence of inflorescence internodes, bushy aspect, and flowers with altered number and size of organs. sef plants flower earlier than wild-type plants both under inductive and non-inductive photoperiods. SEF, ARP6 and PIE1 might form a molecular complex in Arabidopsis related to the SWR1/SRCAP complex identified in other eukaryotes.; SERRATED LEAVES AND EARLY FLOWERING (SEF); CONTAINS InterPro DOMAIN/s: Zinc finger, HIT-type (InterPro:IPR007529); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 406.0) & (original description: Putative SWC6, Description = SWR1 complex subunit 6, PFAM = PF04438)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03486_146599-153310' '(at3g60800 : 420.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT4G22750.1); Has 5091 Blast hits to 5089 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 2186; Fungi - 767; Plants - 823; Viruses - 0; Other Eukaryotes - 1315 (source: NCBI BLink). & (gnl|cdd|36529 : 276.0) no description available & (gnl|cdd|34870 : 119.0) no description available & (reliability: 840.0) & (original description: Putative PAT14, Description = Probable protein S-acyltransferase 14, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03532_139392-143535' '(gnl|cdd|37555 : 499.0) no description available & (gnl|cdd|86233 : 494.0) no description available & (at3g55150 : 437.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H1 (EXO70H1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, exocyst; EXPRESSED IN: sperm cell, root, pollen tube; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H2 (TAIR:AT2G39380.1); Has 814 Blast hits to 800 proteins in 89 species: Archae - 0; Bacteria - 0; Metazoa - 134; Fungi - 34; Plants - 631; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 874.0) & (original description: Putative EXO70H7, Description = AT5g59730/mth12_130, PFAM = PF03081)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03555_172486-176153' '(at3g59080 : 648.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: DNA binding, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT2G42980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36553 : 269.0) no description available & (gnl|cdd|84452 : 94.2) no description available & (q6yny7|asp1_orysa : 82.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 1296.0) & (original description: Putative ACRE36, Description = Avr9/Cf-9 rapidly elicited protein 36, PFAM = PF14543;PF14541)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03572_15117-20310' '(at3g21100 : 295.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G51520.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 570.0) & (original description: Putative Os03g0328900, Description = Zinc finger CCCH domain-containing protein 22, PFAM = PF00642;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03584_541556-549508' '(at5g45550 : 436.0) Mob1/phocein family protein; CONTAINS InterPro DOMAIN/s: Mob1/phocein (InterPro:IPR005301); BEST Arabidopsis thaliana protein match is: Mob1/phocein family protein (TAIR:AT4G19045.1); Has 1269 Blast hits to 1261 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 709; Fungi - 290; Plants - 115; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|35661 : 338.0) no description available & (gnl|cdd|86392 : 259.0) no description available & (reliability: 850.0) & (original description: Putative MOB1A, Description = MOB kinase activator-like 1A, PFAM = PF03637)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03597_36166-45160' '(at3g20800 : 498.0) Cell differentiation, Rcd1-like protein; CONTAINS InterPro DOMAIN/s: Cell differentiation, Rcd1-like (InterPro:IPR007216); BEST Arabidopsis thaliana protein match is: Cell differentiation, Rcd1-like protein (TAIR:AT5G12980.1); Has 491 Blast hits to 488 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 160; Fungi - 135; Plants - 110; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|80055 : 433.0) no description available & (gnl|cdd|38246 : 428.0) no description available & (reliability: 996.0) & (original description: Putative RQCD1, Description = Cell differentiation protein RCD1 homolog, PFAM = PF04078)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03613_75571-84166' '(at4g22140 : 316.0) EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72854 : 139.0) no description available & (gnl|cdd|37097 : 126.0) no description available & (reliability: 610.0) & (original description: Putative SHL, Description = Chromatin remodeling protein SHL, PFAM = PF00628;PF01426)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03619_304140-307659' '(at1g64830 : 342.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G33340.1); Has 3478 Blast hits to 3458 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 661; Fungi - 712; Plants - 1893; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36553 : 208.0) no description available & (gnl|cdd|84452 : 88.8) no description available & (q6yny7|asp1_orysa : 80.9) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 652.0) & (original description: Putative AP1, Description = Eukaryotic aspartyl protease family protein, PFAM = PF14541;PF14543)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03628_68236-83042' '(at3g58130 : 315.0) N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: N-acetylglucosaminyl phosphatidylinositol deacetylase (InterPro:IPR003737); BEST Arabidopsis thaliana protein match is: N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein (TAIR:AT2G27340.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38542 : 247.0) no description available & (gnl|cdd|66288 : 98.9) no description available & (reliability: 630.0) & (original description: Putative LOC100283695, Description = N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, PFAM = PF02585)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03670_460471-463772' '(at1g09750 : 469.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G54400.1); Has 2762 Blast hits to 2753 proteins in 256 species: Archae - 0; Bacteria - 2; Metazoa - 415; Fungi - 350; Plants - 1861; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink). & (gnl|cdd|36553 : 196.0) no description available & (reliability: 938.0) & (original description: Putative AED3, Description = Aspartyl protease AED3, PFAM = PF14543;PF14541)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03705_356054-361400' '(at1g31040 : 246.0) PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT2G12646.1); Has 411 Blast hits to 411 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 411; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 176.0) no description available & (reliability: 492.0) & (original description: Putative Sb10g026620, Description = Putative uncharacterized protein Sb10g026620, PFAM = PF04640)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03723_250919-253832' '(at5g41060 : 106.0) DHHC-type zinc finger family protein; FUNCTIONS IN: receptor activity, zinc ion binding; INVOLVED IN: multicellular organismal development; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Plexin-like fold (InterPro:IPR016201); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G26935.1); Has 5132 Blast hits to 5125 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 2201; Fungi - 730; Plants - 844; Viruses - 0; Other Eukaryotes - 1357 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative PGSC0003DMG400028962, Description = S-acyltransferase, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03729_30209-46081' '(at1g32540 : 155.0) Encodes a protein with 3 plant-specific zinc finger domains that acts as a positive regulator of cell death.; lsd one like 1 (LOL1); FUNCTIONS IN: DNA binding; INVOLVED IN: induction of apoptosis; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735); BEST Arabidopsis thaliana protein match is: LSD1 zinc finger family protein (TAIR:AT4G20380.7); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative LOL2, Description = Protein LOL2, PFAM = PF06943;PF06943;PF06943)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03731_235757-245187' '(at5g54310 : 395.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. Regulates membrane trafficking and organ separation.; ARF-GAP domain 5 (AGD5); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: floral organ abscission, activation of ARF GTPase activity; LOCATED IN: cytosol, trans-Golgi network, endosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 15 (TAIR:AT3G17660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35922 : 186.0) no description available & (gnl|cdd|85433 : 157.0) no description available & (reliability: 790.0) & (original description: Putative AGD5, Description = Probable ADP-ribosylation factor GTPase-activating protein AGD5, PFAM = PF01412)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03770_214718-220230' '(at3g17611 : 352.0) RHOMBOID-like protein 14 (RBL14); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); Has 157 Blast hits to 157 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 77; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|37843 : 170.0) no description available & (reliability: 704.0) & (original description: Putative RBL14, Description = Rhomboid-like protein 14, mitochondrial, PFAM = PF01694;PF00641)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03786_291959-302005' '(gnl|cdd|38246 : 233.0) no description available & (gnl|cdd|80055 : 230.0) no description available & (at3g20800 : 223.0) Cell differentiation, Rcd1-like protein; CONTAINS InterPro DOMAIN/s: Cell differentiation, Rcd1-like (InterPro:IPR007216); BEST Arabidopsis thaliana protein match is: Cell differentiation, Rcd1-like protein (TAIR:AT5G12980.1); Has 491 Blast hits to 488 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 160; Fungi - 135; Plants - 110; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative RQCD1, Description = Cell differentiation protein RCD1 homolog, PFAM = PF04078)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03793_256081-289952' '(at4g00850 : 108.0) Arabidopsis thaliana GRF1-interacting factor 3 (GIF3) mRNA; GRF1-interacting factor 3 (GIF3); CONTAINS InterPro DOMAIN/s: SSXT (InterPro:IPR007726); BEST Arabidopsis thaliana protein match is: GRF1-interacting factor 2 (TAIR:AT1G01160.1); Has 414 Blast hits to 414 proteins in 93 species: Archae - 0; Bacteria - 2; Metazoa - 279; Fungi - 27; Plants - 81; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative GIF3, Description = GRF1-interacting factor 3, PFAM = PF05030)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03801_348069-357072' '(at2g39830 : 609.0) DA1-related protein 2 (DAR2); FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: LIM domain-containing protein (TAIR:AT4G36860.1); Has 1539 Blast hits to 1276 proteins in 109 species: Archae - 0; Bacteria - 10; Metazoa - 1178; Fungi - 26; Plants - 170; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|36916 : 215.0) no description available & (reliability: 1218.0) & (original description: Putative DAR2, Description = Protein DA1-related 2, PFAM = PF12315;PF00412)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03805_72625-79461' '(at2g32080 : 412.0) similar to the conserved animal nuclear protein PUR alpha which was implicated in the control of gene transcription and DNA replication; purin-rich alpha 1 (PUR ALPHA-1); FUNCTIONS IN: nucleic acid binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PUR-alpha/beta/gamma, DNA/RNA-binding (InterPro:IPR006628); Has 588 Blast hits to 332 proteins in 74 species: Archae - 0; Bacteria - 31; Metazoa - 438; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|38284 : 213.0) no description available & (gnl|cdd|68420 : 104.0) no description available & (reliability: 824.0) & (original description: Putative PURA1, Description = Transcription factor Pur-alpha 1, PFAM = PF04845;PF04845)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03863_48276-52202' '(at5g06810 : 429.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT4G19650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 858.0) & (original description: Putative BnaC09g32350D, Description = BnaC09g32350D protein, PFAM = PF02536;PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03886_312120-320173' '(at3g26935 : 575.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G41060.1); Has 5153 Blast hits to 5144 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 2200; Fungi - 770; Plants - 850; Viruses - 0; Other Eukaryotes - 1333 (source: NCBI BLink). & (gnl|cdd|36525 : 246.0) no description available & (gnl|cdd|34870 : 132.0) no description available & (reliability: 1150.0) & (original description: Putative PAT05, Description = Probable protein S-acyltransferase 5, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03930_573420-611374' '(at5g19420 : 828.0) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-related (InterPro:IPR017455), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Pleckstrin homology-type (InterPro:IPR011993), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G12350.1). & (gnl|cdd|34783 : 134.0) no description available & (gnl|cdd|36640 : 114.0) no description available & (reliability: 1656.0) & (original description: Putative PRAF1, Description = Regulator of chromosome condensation and FYVE zinc finger domain-containing protein, PFAM = PF01363;PF00415;PF00415;PF00415;PF00415;PF00415;PF00415)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03949_613933-616913' '(at4g38160 : 418.0) pigment defective 191 (pde191); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G21710.1). & (gnl|cdd|36481 : 119.0) no description available & (gnl|cdd|66247 : 117.0) no description available & (reliability: 836.0) & (original description: Putative MTERF6, Description = Transcription termination factor MTERF6, chloroplastic/mitochondrial, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf03981_54060-64359' '(at2g28450 : 748.0) zinc finger (CCCH-type) family protein; FUNCTIONS IN: zinc ion binding, RNA methyltransferase activity, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), (Uracil-5)-methyltransferase (InterPro:IPR010280); BEST Arabidopsis thaliana protein match is: RNA methyltransferase family protein (TAIR:AT3G21300.1). & (gnl|cdd|37398 : 292.0) no description available & (gnl|cdd|32446 : 149.0) no description available & (reliability: 1496.0) & (original description: Putative At2g28450, Description = Zinc finger CCCH domain-containing protein 24, PFAM = PF13847;PF05958;PF00642)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04000_241133-247418' '(at2g47350 : 223.0) HIT zinc finger ;PAPA-1-like conserved region; CONTAINS InterPro DOMAIN/s: PAPA-1-like conserved region (InterPro:IPR006880); BEST Arabidopsis thaliana protein match is: PAPA-1-like family protein / zinc finger (HIT type) family protein (TAIR:AT3G06660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68370 : 110.0) no description available & (reliability: 446.0) & (original description: Putative At2g47350, Description = At2g47350, PFAM = PF04795;PF04438)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04015_267799-278456' '(at5g43100 : 659.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G50050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36553 : 247.0) no description available & (gnl|cdd|84452 : 133.0) no description available & (q6yny7|asp1_orysa : 98.6) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 1318.0) & (original description: Putative ASP2, Description = Aspartic proteinase-like protein 2, PFAM = PF14543;PF14541)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04019_505456-522609' '(at2g47850 : 457.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1); Has 1724 Blast hits to 1003 proteins in 159 species: Archae - 0; Bacteria - 7; Metazoa - 368; Fungi - 218; Plants - 971; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (q5naw2|zfnl1_orysa : 336.0) Zinc finger CCCH domain-containing protein ZFN-like 1 - Oryza sativa (Rice) & (gnl|cdd|36890 : 122.0) no description available & (reliability: 914.0) & (original description: Putative At2g47850, Description = Zinc finger CCCH domain-containing protein 32, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04078_142697-147617' '(at1g49920 : 135.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (gnl|cdd|72786 : 86.5) no description available & (reliability: 254.0) & (original description: Putative At3g05850, Description = Putative ovule protein, PFAM = PF10551;PF03108;PF00564;PF04434)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04122_304896-314679' '(at4g00990 : 424.0) Transcription factor jumonji (jmjC) domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, RING-type (InterPro:IPR001841), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G11950.1); Has 966 Blast hits to 671 proteins in 113 species: Archae - 0; Bacteria - 8; Metazoa - 538; Fungi - 54; Plants - 301; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36570 : 247.0) no description available & (reliability: 796.0) & (original description: Putative glysoja_014359, Description = Lysine-specific demethylase 3A-A, PFAM = PF02373;PF08879)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04122_309120-312489' '(at4g00990 : 125.0) Transcription factor jumonji (jmjC) domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, RING-type (InterPro:IPR001841), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G11950.1); Has 966 Blast hits to 671 proteins in 113 species: Archae - 0; Bacteria - 8; Metazoa - 538; Fungi - 54; Plants - 301; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36570 : 104.0) no description available & (reliability: 232.0) & (original description: Putative glysoja_014359, Description = Transcription factor jumonji (JmjC) domain protein, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04206_214589-220986' '(at4g28820 : 95.9) HIT-type Zinc finger family protein; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, HIT-type (InterPro:IPR007529); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38068 : 84.8) no description available & (reliability: 191.8) & (original description: Putative PHYPADRAFT_173627, Description = Predicted protein, PFAM = PF04438)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04220_520822-530151' '(at3g21810 : 130.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 904 Blast hits to 850 proteins in 161 species: Archae - 9; Bacteria - 40; Metazoa - 431; Fungi - 54; Plants - 83; Viruses - 2; Other Eukaryotes - 285 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative PGSC0003DMG401024331, Description = Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform 1, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04223_189720-192728' '(p27484|grp2_nicsy : 98.6) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at2g17870 : 96.3) Encodes COLD SHOCK DOMAIN PROTEIN 3 (CSP3), involved in the acquisition of freezing tolerance.; cold shock domain protein 3 (CSP3); FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: response to cold, DNA duplex unwinding; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Cold shock protein (InterPro:IPR011129), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: cold shock domain protein 1 (TAIR:AT4G36020.1); Has 72472 Blast hits to 41123 proteins in 2889 species: Archae - 51; Bacteria - 27281; Metazoa - 11105; Fungi - 2852; Plants - 6181; Viruses - 14957; Other Eukaryotes - 10045 (source: NCBI BLink). & (gnl|cdd|84686 : 83.3) no description available & (reliability: 192.6) & (original description: Putative cspA, Description = Cold-shock protein, PFAM = PF00313;PF00098;PF00098)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04254_162118-171506' '(at5g45550 : 321.0) Mob1/phocein family protein; CONTAINS InterPro DOMAIN/s: Mob1/phocein (InterPro:IPR005301); BEST Arabidopsis thaliana protein match is: Mob1/phocein family protein (TAIR:AT4G19045.1); Has 1269 Blast hits to 1261 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 709; Fungi - 290; Plants - 115; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|35661 : 263.0) no description available & (gnl|cdd|86392 : 211.0) no description available & (reliability: 612.0) & (original description: Putative mobC, Description = MOB kinase activator-like 1 homolog C, PFAM = PF03637)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04283_1027175-1032382' '(at3g63140 : 585.0) Encodes a protein with ribonuclease activity that is involved in plastid rRNA maturation.; chloroplast stem-loop binding protein of 41 kDa (CSP41A); FUNCTIONS IN: mRNA binding, poly(U) RNA binding; INVOLVED IN: rRNA processing; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: chloroplast RNA binding (TAIR:AT1G09340.1); Has 1047 Blast hits to 1047 proteins in 372 species: Archae - 70; Bacteria - 649; Metazoa - 6; Fungi - 5; Plants - 106; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|30800 : 83.9) no description available & (reliability: 1170.0) & (original description: Putative CSP41A, Description = Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic, PFAM = PF01370)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04300_249151-280599' '(at3g04970 : 523.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein with DHHC zinc finger domain (TAIR:AT2G14255.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36526 : 271.0) no description available & (gnl|cdd|34870 : 95.9) no description available & (reliability: 1046.0) & (original description: Putative PAT17, Description = Probable protein S-acyltransferase 17, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04327_280667-283777' '(p27484|grp2_nicsy : 101.0) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (at4g38680 : 86.3) Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development.; glycine rich protein 2 (GRP2); FUNCTIONS IN: double-stranded DNA binding, mRNA binding, single-stranded DNA binding, nucleic acid binding; INVOLVED IN: stamen development, vegetative to reproductive phase transition of meristem, response to cold, seed development, DNA duplex unwinding; LOCATED IN: nucleolus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 37 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold shock protein (InterPro:IPR011129), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine-rich protein 2B (TAIR:AT2G21060.1); Has 150401 Blast hits to 55289 proteins in 3379 species: Archae - 285; Bacteria - 51625; Metazoa - 48133; Fungi - 9113; Plants - 13783; Viruses - 1771; Other Eukaryotes - 25691 (source: NCBI BLink). & (gnl|cdd|84686 : 85.2) no description available & (reliability: 163.2) & (original description: Putative nab1, Description = Glycine-rich protein 2, PFAM = PF00313;PF00098)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04347_258331-261853' '(at1g01300 : 549.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis, response to karrikin; LOCATED IN: membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G61820.1); Has 3898 Blast hits to 3871 proteins in 332 species: Archae - 0; Bacteria - 0; Metazoa - 1165; Fungi - 579; Plants - 1953; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (gnl|cdd|36553 : 263.0) no description available & (gnl|cdd|84452 : 107.0) no description available & (reliability: 1018.0) & (original description: Putative APF2, Description = Aspartyl protease family protein 2, PFAM = PF14541;PF14543)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04361_17827-31020' '(at2g30580 : 398.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 2 (DRIP2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 1 (TAIR:AT1G06770.1); Has 1631 Blast hits to 1626 proteins in 163 species: Archae - 0; Bacteria - 2; Metazoa - 1227; Fungi - 58; Plants - 232; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|37871 : 128.0) no description available & (reliability: 750.0) & (original description: Putative DRIP1, Description = E3 ubiquitin protein ligase DRIP1, PFAM = PF13923)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04411_235207-245041' '(at3g57170 : 457.0) N-acetylglucosaminyl transferase component family protein / Gpi1 family protein; FUNCTIONS IN: transferase activity, phosphatidylinositol N-acetylglucosaminyltransferase activity; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: N-acetylglucosaminyl transferase component (InterPro:IPR007720); Has 334 Blast hits to 333 proteins in 180 species: Archae - 0; Bacteria - 0; Metazoa - 114; Fungi - 132; Plants - 32; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|36397 : 311.0) no description available & (gnl|cdd|68593 : 172.0) no description available & (reliability: 914.0) & (original description: Putative BnaA09g36520D, Description = BnaA09g36520D protein, PFAM = PF05024)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04457_271508-274598' '(at3g18490 : 159.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G25510.1); Has 4095 Blast hits to 4076 proteins in 356 species: Archae - 0; Bacteria - 4; Metazoa - 1079; Fungi - 788; Plants - 1999; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|36553 : 159.0) no description available & (reliability: 318.0) & (original description: Putative PGSC0003DMG400043757, Description = , PFAM = PF14541;PF14543)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04457_404977-408473' '(at3g18490 : 155.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G25510.1); Has 4095 Blast hits to 4076 proteins in 356 species: Archae - 0; Bacteria - 4; Metazoa - 1079; Fungi - 788; Plants - 1999; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|36553 : 136.0) no description available & (reliability: 310.0) & (original description: Putative PGSC0003DMG400045930, Description = , PFAM = PF14541;PF14543)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04457_425293-428681' '(at3g18490 : 152.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G25510.1); Has 4095 Blast hits to 4076 proteins in 356 species: Archae - 0; Bacteria - 4; Metazoa - 1079; Fungi - 788; Plants - 1999; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|36553 : 124.0) no description available & (reliability: 304.0) & (original description: Putative PGSC0003DMG400027447, Description = , PFAM = PF14541;PF14543)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04457_451359-454985' '(gnl|cdd|36553 : 103.0) no description available & (at2g03200 : 96.7) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G01300.1); Has 2634 Blast hits to 2609 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 441; Plants - 1862; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative PGSC0003DMG400043757, Description = , PFAM = PF14543;PF14541)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04457_454919-457750' '(at3g18490 : 135.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G25510.1); Has 4095 Blast hits to 4076 proteins in 356 species: Archae - 0; Bacteria - 4; Metazoa - 1079; Fungi - 788; Plants - 1999; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|36553 : 126.0) no description available & (reliability: 270.0) & (original description: Putative PGSC0003DMG400043757, Description = , PFAM = PF14543;PF14541)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04511_10064-12948' '(at2g34620 : 355.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G03050.1); Has 1033 Blast hits to 730 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 21; Fungi - 0; Plants - 921; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|66247 : 155.0) no description available & (gnl|cdd|36481 : 89.8) no description available & (reliability: 710.0) & (original description: Putative MTERF1, Description = Transcription termination factor MTEF1, chloroplastic, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04554_774967-790116' '(at4g26000 : 352.0) Encodes a novel Arabidopsis gene encoding a polypeptide with K-homology (KH) RNA-binding modules, which acts on vegetative growth and pistil development. Genetic studies suggest that PEP interacts with element(s) of the CLAVATA signaling pathway.; PEPPER (PEP); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: shoot development, gynoecium development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT3G04610.1); Has 2804 Blast hits to 2065 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 1818; Fungi - 225; Plants - 670; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|37401 : 154.0) no description available & (reliability: 704.0) & (original description: Putative PEP, Description = Poly(RC)-binding-like protein, PFAM = PF00013;PF00013;PF00013)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04582_96077-98683' '(at2g36320 : 128.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT3G52800.1); Has 1065 Blast hits to 1046 proteins in 150 species: Archae - 2; Bacteria - 0; Metazoa - 450; Fungi - 9; Plants - 480; Viruses - 6; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|38383 : 113.0) no description available & (reliability: 256.0) & (original description: Putative BnaAnng21800D, Description = BnaAnng21800D protein, PFAM = PF01428;PF01754)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04714_205464-262041' '(at3g60670 : 242.0) PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT2G12646.1); Has 407 Blast hits to 407 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 407; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 159.0) no description available & (reliability: 484.0) & (original description: Putative RCOM_1610740, Description = Zinc ion binding protein, putative, PFAM = PF04640)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04724_92741-97602' '(at1g64260 : 114.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 98.5) no description available & (reliability: 228.0) & (original description: Putative SDM1_53t00022, Description = Zinc finger containing preotein, putative, PFAM = PF03108;PF04434;PF10551)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04724_93462-96941' '(at1g64255 : 87.4) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, SWIM-type (InterPro:IPR007527), Zinc finger, PMZ-type (InterPro:IPR006564), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72786 : 84.2) no description available & (reliability: 174.8) & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551;PF03108)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04804_119829-124382' '(p93788|remo_soltu : 144.0) Remorin (pp34) - Solanum tuberosum (Potato) & (at3g48940 : 113.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT5G23750.2); Has 1837 Blast hits to 1261 proteins in 238 species: Archae - 1; Bacteria - 261; Metazoa - 152; Fungi - 115; Plants - 477; Viruses - 0; Other Eukaryotes - 831 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative DBP, Description = Remorin, PFAM = PF03763;PF03766)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04819_454133-458607' '(at2g47350 : 190.0) HIT zinc finger ;PAPA-1-like conserved region; CONTAINS InterPro DOMAIN/s: PAPA-1-like conserved region (InterPro:IPR006880); BEST Arabidopsis thaliana protein match is: PAPA-1-like family protein / zinc finger (HIT type) family protein (TAIR:AT3G06660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68370 : 96.7) no description available & (reliability: 380.0) & (original description: Putative BnaA05g00590D, Description = BnaA05g00590D protein, PFAM = PF04438;PF04795)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04847_417949-440512' '(at1g55750 : 627.0) BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins); CONTAINS InterPro DOMAIN/s: Kelch related (InterPro:IPR013089), BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) (TAIR:AT3G61420.1); Has 363 Blast hits to 357 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 137; Fungi - 134; Plants - 65; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|37285 : 289.0) no description available & (reliability: 1254.0) & (original description: Putative BSD10, Description = Putative RNA polymerase II transcription factor B subunit 1-1, PFAM = PF08567;PF03909)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04893_247309-255233' '(at4g24630 : 483.0) DHHC-type zinc finger family protein; FUNCTIONS IN: receptor activity, zinc ion binding; INVOLVED IN: multicellular organismal development; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Plexin-like fold (InterPro:IPR016201); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G50020.2); Has 5142 Blast hits to 5136 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 2201; Fungi - 738; Plants - 841; Viruses - 0; Other Eukaryotes - 1362 (source: NCBI BLink). & (gnl|cdd|36525 : 227.0) no description available & (gnl|cdd|34870 : 122.0) no description available & (reliability: 966.0) & (original description: Putative PAT08, Description = Protein S-acyltransferase 8, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04899_194645-204642' '(at4g21610 : 110.0) Contains the same novel zinc finger motif with LSD1, a negative regulator of cell death and defense response. Due to differential splicing, it encodes two different proteins, one of which contains an additional, putative DNA binding motif. Northern analysis demonstrated that LOL2 transcripts containing the additional DNA binding motif are predominantly upregulated after treatment with both virulent and avirulent Pseudomonas syringae pv maculicola strains.; lsd one like 2 (LOL2); CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735); BEST Arabidopsis thaliana protein match is: lsd one like 1 (TAIR:AT1G32540.1); Has 291 Blast hits to 191 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 255; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative LOL1, Description = AtLOL1, PFAM = PF06943;PF06943)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04953_522367-526807' '(at5g03150 : 293.0) JKD is a nuclear-localized putative transcription factor with three zinc finger domains. jkd mutants show a number of root patterning defects including ectopic periclinal divisions in the cortex, increased cell numbers in the cortical and epidermal layers, a disrupted QC marker expression pattern, and disorganized QC and columella cells. jkd mutants also have a reduced number of meristematic cells in their roots. JKD can interact with the SCR and SHR proteins implicated in root patterning, as well as another zinc finger transcription factor, MAGPIE. All of these interactions require the first zinc finger in JKD according to a Y2H assay. There are also transcriptional interactions among these proteins. The initiation of JKD transcription does not appear to depend on SCR and SHR, but later expression in the post-embryonic QC cells and ground tissue initials is reduced in scr and shr mutants. JKD also appears to be required for SCR transcription beginning in the embryo. There is also some evidence that JKD plays a role in promoting the movement of SHR into the nucleus, particularly in QC cells, but this may be indirect.; JACKDAW (JKD); FUNCTIONS IN: protein binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of epidermal cell differentiation, regulation of meristem growth, regulation of cell division, root development, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G66730.1); Has 56579 Blast hits to 20803 proteins in 357 species: Archae - 0; Bacteria - 66; Metazoa - 49427; Fungi - 692; Plants - 856; Viruses - 6; Other Eukaryotes - 5532 (source: NCBI BLink). & (reliability: 530.0) & (original description: Putative JKD, Description = Zinc finger protein JACKDAW, PFAM = PF12171)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04992_193161-196539' '(at2g33845 : 168.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT4G28440.1); Has 251 Blast hits to 251 proteins in 51 species: Archae - 23; Bacteria - 0; Metazoa - 2; Fungi - 4; Plants - 168; Viruses - 30; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative At1g10590, Description = DNA-binding family protein, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf04995_709451-724967' '(at1g45207 : 339.0) Remorin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT4G36970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67381 : 96.2) no description available & (reliability: 678.0) & (original description: Putative At1g45207, Description = Remorin-like protein, PFAM = PF03763)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05004_504552-508573' '(at4g31540 : 951.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein G1 (EXO70G1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, exocyst; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein G2 (TAIR:AT1G51640.1); Has 805 Blast hits to 799 proteins in 127 species: Archae - 0; Bacteria - 1; Metazoa - 136; Fungi - 99; Plants - 561; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|86233 : 432.0) no description available & (gnl|cdd|37555 : 395.0) no description available & (reliability: 1902.0) & (original description: Putative BnaA01g34780D, Description = BnaA01g34780D protein, PFAM = PF03081)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05060_326492-328773' '(at3g28917 : 89.7) mini zinc finger 2 (MIF2); CONTAINS InterPro DOMAIN/s: ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456); BEST Arabidopsis thaliana protein match is: mini zinc finger (TAIR:AT1G18835.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68346 : 85.0) no description available & (reliability: 179.4) & (original description: Putative MIF2, Description = Mini zinc finger protein 2, PFAM = PF04770)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05100_189922-198973' '(p82277|rrp2_spiol : 264.0) Plastid-specific 30S ribosomal protein 2, chloroplast precursor (PSRP-2) - Spinacia oleracea (Spinach) & (at3g52150 : 258.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 33 (TAIR:AT3G52380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35346 : 89.8) no description available & (reliability: 516.0) & (original description: Putative BnaA04g05670D, Description = BnaA04g05670D protein, PFAM = PF00076;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05118_443029-451331' '(at2g45820 : 93.6) Remorin family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G61260.1); Has 2543 Blast hits to 1840 proteins in 340 species: Archae - 2; Bacteria - 408; Metazoa - 392; Fungi - 191; Plants - 500; Viruses - 4; Other Eukaryotes - 1046 (source: NCBI BLink). & (p93788|remo_soltu : 91.7) Remorin (pp34) - Solanum tuberosum (Potato) & (gnl|cdd|67381 : 83.5) no description available & (reliability: 180.2) & (original description: Putative DBP, Description = Remorin, PFAM = PF03763)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05175_167470-172155' '(at3g25700 : 494.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT2G42980.1); Has 661 Blast hits to 418 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 4; Plants - 631; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|36553 : 211.0) no description available & (reliability: 988.0) & (original description: Putative At3g25700, Description = Aspartyl protease family protein, PFAM = PF14541;PF14543)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05206_104552-107742' '(at1g55460 : 497.0) DNA/RNA-binding protein Kin17, conserved region; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), DNA/RNA-binding protein Kin17, conserved region (InterPro:IPR019447), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: DNA/RNA-binding protein Kin17, conserved region (TAIR:AT5G51795.1); Has 1885 Blast hits to 1561 proteins in 251 species: Archae - 4; Bacteria - 25; Metazoa - 715; Fungi - 242; Plants - 160; Viruses - 13; Other Eukaryotes - 726 (source: NCBI BLink). & (gnl|cdd|38048 : 313.0) no description available & (reliability: 994.0) & (original description: Putative KIN, Description = DNA/RNA-binding protein KIN17, PFAM = PF10357)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05245_5548-9308' '(at4g19650 : 519.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: mitochondrial transcription termination factor-related / mTERF-related (TAIR:AT5G45113.1); Has 236 Blast hits to 231 proteins in 19 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 0; Plants - 229; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1038.0) & (original description: Putative BnaC01g11990D, Description = BnaC01g11990D protein, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05283_161210-189040' '(gnl|cdd|72855 : 170.0) no description available & (at5g11470 : 161.0) bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Bromo adjacent homology (BAH) domain (InterPro:IPR001025); BEST Arabidopsis thaliana protein match is: nucleic acid binding (TAIR:AT3G15605.4); Has 602 Blast hits to 478 proteins in 106 species: Archae - 0; Bacteria - 17; Metazoa - 295; Fungi - 38; Plants - 91; Viruses - 4; Other Eukaryotes - 157 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative BnaA03g03350D, Description = Putative ovule protein, PFAM = PF01426;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05323_189915-205245' '(at2g33835 : 97.1) Encodes a zinc finger domain containing protein that is expressed in the shoot/root apex and vasculature, and acts with FRI to repress flowering.FES1 mutants in a Col(FRI+) background will flower early under inductive conditions.; FRIGIDA-ESSENTIAL 1 (FES1); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: positive regulation of vernalization response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, vascular tissue, root tip; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT3G18640.1); Has 279 Blast hits to 165 proteins in 46 species: Archae - 0; Bacteria - 31; Metazoa - 18; Fungi - 38; Plants - 89; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative POPTR_0004s04680g, Description = Zinc finger family protein, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05346_371217-374903' '(at1g67340 : 459.0) HCP-like superfamily protein with MYND-type zinc finger; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), Tetratricopeptide-like helical (InterPro:IPR011990), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein with MYND-type zinc finger (TAIR:AT5G50450.1); Has 623 Blast hits to 604 proteins in 167 species: Archae - 0; Bacteria - 161; Metazoa - 77; Fungi - 145; Plants - 151; Viruses - 2; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 918.0) & (original description: Putative At1g67340, Description = F-box protein At1g67340, PFAM = PF01753)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05348_432167-434685' '(gnl|cdd|38383 : 144.0) no description available & (at1g12440 : 123.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT4G12040.2); Has 1075 Blast hits to 1057 proteins in 149 species: Archae - 0; Bacteria - 0; Metazoa - 452; Fungi - 9; Plants - 482; Viruses - 6; Other Eukaryotes - 126 (source: NCBI BLink). & (q9llx1|isap1_orysa : 85.9) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (reliability: 246.0) & (original description: Putative SAP7, Description = Zinc finger A20 and AN1 domain-containing stress-associated protein 7, PFAM = PF01428;PF01754)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05494_53205-57869' '(at3g44150 : 288.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11800.1); Has 76 Blast hits to 75 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 564.0) & (original description: Putative BnaA06g38910D, Description = BnaA06g38910D protein, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05574_407617-415216' '(at2g39830 : 662.0) DA1-related protein 2 (DAR2); FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: LIM domain-containing protein (TAIR:AT4G36860.1); Has 1539 Blast hits to 1276 proteins in 109 species: Archae - 0; Bacteria - 10; Metazoa - 1178; Fungi - 26; Plants - 170; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|36916 : 223.0) no description available & (reliability: 1324.0) & (original description: Putative DAR2, Description = Protein DA1-related 2, PFAM = PF12315;PF00412)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05583_122931-129392' '(at3g48440 : 319.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G63260.1); Has 1758 Blast hits to 1034 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 389; Fungi - 243; Plants - 962; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (q5jlb5|zfnl2_orysa : 234.0) Zinc finger CCCH domain-containing protein ZFN-like 2 - Oryza sativa (Rice) & (gnl|cdd|36890 : 111.0) no description available & (reliability: 638.0) & (original description: Putative PGSC0003DMG400015168, Description = Zinc finger CCCH domain-containing protein 43, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05596_142081-145397' '(at1g64830 : 390.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G33340.1); Has 3478 Blast hits to 3458 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 661; Fungi - 712; Plants - 1893; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36553 : 214.0) no description available & (reliability: 758.0) & (original description: Putative CDR1, Description = Aspartic proteinase CDR1, PFAM = PF14543;PF14541)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05621_842054-845542' '(at1g67340 : 459.0) HCP-like superfamily protein with MYND-type zinc finger; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), Tetratricopeptide-like helical (InterPro:IPR011990), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein with MYND-type zinc finger (TAIR:AT5G50450.1); Has 623 Blast hits to 604 proteins in 167 species: Archae - 0; Bacteria - 161; Metazoa - 77; Fungi - 145; Plants - 151; Viruses - 2; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 918.0) & (original description: Putative At1g67340, Description = F-box protein At1g67340, PFAM = PF01753)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05813_151962-156493' '(at1g45207 : 172.0) Remorin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT4G36970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative PGSC0003DMG400004040, Description = Carboxy-terminal region remorin, PFAM = PF03763)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05821_168762-175835' '(at3g26935 : 537.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G41060.1); Has 5153 Blast hits to 5144 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 2200; Fungi - 770; Plants - 850; Viruses - 0; Other Eukaryotes - 1333 (source: NCBI BLink). & (gnl|cdd|36525 : 248.0) no description available & (gnl|cdd|34870 : 132.0) no description available & (reliability: 1074.0) & (original description: Putative PAT04, Description = Palmitoyltransferase, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05822_511146-519977' '(at5g58760 : 707.0) Encodes a DDB1a interacting protein DDB2 required for UV-B tolerance and genomic integrity.; damaged DNA binding 2 (DDB2); FUNCTIONS IN: nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: DNA repair, response to UV-B; LOCATED IN: nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Zinc finger, CCHC-type (InterPro:IPR001878), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: DROUGHT SENSITIVE 1 (TAIR:AT1G80710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39529 : 357.0) no description available & (gnl|cdd|29257 : 80.4) no description available & (reliability: 1414.0) & (original description: Putative DDB2, Description = Protein DAMAGED DNA-BINDING 2, PFAM = PF00400)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05827_297656-303429' '(at3g18580 : 258.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: single-stranded DNA binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Primosome PriB/single-strand DNA-binding (InterPro:IPR000424); BEST Arabidopsis thaliana protein match is: mitochondrially targeted single-stranded DNA binding protein (TAIR:AT4G11060.1); Has 3646 Blast hits to 3646 proteins in 1001 species: Archae - 0; Bacteria - 2307; Metazoa - 115; Fungi - 0; Plants - 68; Viruses - 24; Other Eukaryotes - 1132 (source: NCBI BLink). & (gnl|cdd|36866 : 135.0) no description available & (reliability: 516.0) & (original description: Putative At3g18580, Description = Single-strand DNA-binding protein, PFAM = PF00436)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf05948_249368-256300' '(at1g29800 : 655.0) RING/FYVE/PHD-type zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Ysc84 actin-binding domain (InterPro:IPR007461); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD-type zinc finger family protein (TAIR:AT3G43230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37054 : 415.0) no description available & (gnl|cdd|32754 : 148.0) no description available & (reliability: 1310.0) & (original description: Putative At1g29800, Description = Putative uncharacterized protein At1g29800, PFAM = PF04366;PF01363)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06016_34840-43360' '(at1g05055 : 601.0) Member of transcription factor TFIIH complex. Involved in transcription and DNA repair and interacts with AtXPD.; general transcription factor II H2 (GTF2H2); CONTAINS InterPro DOMAIN/s: Ssl1-like (InterPro:IPR007198), TFIIH basal transcription factor complex, subunit SSL1 (InterPro:IPR012170), Zinc finger, RING-type (InterPro:IPR001841), TFIIH C1-like, C-terminal (InterPro:IPR004595), von Willebrand factor, type A (InterPro:IPR002035); Has 470 Blast hits to 463 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 183; Fungi - 160; Plants - 39; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|38018 : 492.0) no description available & (gnl|cdd|67664 : 348.0) no description available & (reliability: 1202.0) & (original description: Putative GTF2H2, Description = General transcription factor IIH subunit 2, PFAM = PF07975;PF04056)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06084_29752-36492' '(at1g11650 : 418.0) RBP45B; FUNCTIONS IN: RNA binding; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 29660 Blast hits to 18296 proteins in 811 species: Archae - 14; Bacteria - 2273; Metazoa - 15265; Fungi - 3531; Plants - 5870; Viruses - 0; Other Eukaryotes - 2707 (source: NCBI BLink). & (gnl|cdd|35370 : 143.0) no description available & (gnl|cdd|31068 : 97.0) no description available & (p19682|roc3_nicsy : 87.8) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (reliability: 836.0) & (original description: Putative RBP45B, Description = Polyadenylate-binding protein RBP45B, PFAM = PF00076;PF00076;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06144_15582-19480' '(gnl|cdd|86233 : 478.0) no description available & (gnl|cdd|37555 : 476.0) no description available & (at2g39380 : 435.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H2 (EXO70H2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: leaf apex, hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H1 (TAIR:AT3G55150.1); Has 836 Blast hits to 829 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 44; Plants - 635; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 852.0) & (original description: Putative EXO70H2, Description = Exocyst subunit exo70 family protein H2, PFAM = PF03081)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06200_291598-295943' '(at4g28440 : 177.0) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G33845.1); Has 214 Blast hits to 214 proteins in 47 species: Archae - 22; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative At4g28440, Description = Uncharacterized protein At4g28440, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06267_36902-45628' '(at1g19860 : 126.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G66270.1); Has 210 Blast hits to 187 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 12; Plants - 160; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative PGSC0003DMG400003556, Description = Zinc finger C-x8-C-x5-C-x3-H type family protein, putative, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06275_327112-330503' '(gnl|cdd|36553 : 156.0) no description available & (at3g18490 : 154.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G25510.1); Has 4095 Blast hits to 4076 proteins in 356 species: Archae - 0; Bacteria - 4; Metazoa - 1079; Fungi - 788; Plants - 1999; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative PGSC0003DMG400045930, Description = , PFAM = PF14541;PF14543)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06311_182158-187880' '(at5g58470 : 150.0) TBP-associated factor 15B (TAF15b); FUNCTIONS IN: binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: TBP-associated factor 15 (TAIR:AT1G50300.1); Has 115051 Blast hits to 45140 proteins in 2321 species: Archae - 166; Bacteria - 28654; Metazoa - 42717; Fungi - 9006; Plants - 12716; Viruses - 1451; Other Eukaryotes - 20341 (source: NCBI BLink). & (gnl|cdd|36139 : 86.5) no description available & (reliability: 300.0) & (original description: Putative BnaCnng31980D, Description = BnaCnng31980D protein, PFAM = PF00076;PF00641)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06394_470212-473469' '(at1g66810 : 201.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G68200.1); Has 998 Blast hits to 914 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 425; Fungi - 99; Plants - 223; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative At1g66810, Description = Zinc finger CCCH domain-containing protein 14, PFAM = PF00642)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06408_372999-376127' '(at1g58330 : 125.0) ZW2; BEST Arabidopsis thaliana protein match is: RESPONSE TO ABA AND SALT 1 (TAIR:AT1G09950.1); Has 556 Blast hits to 556 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 556; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative PGSC0003DMG400011102, Description = DOG1 domain-containing protein, PFAM = PF14144)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06436_108459-114474' '(at2g45640 : 182.0) Involved in the regulation of salt stress. Expression of AtSAP18 is induced by NaCl, cold, drought, ABA, and ethylene treatment. AtSAP18 and HDA19 associate with ERF3 and ERF4 both in vitro and in vivo.; SIN3 associated polypeptide P18 (SAP18); FUNCTIONS IN: protein binding, transcription regulator activity; INVOLVED IN: response to salt stress, response to abscisic acid stimulus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sin3 associated polypeptide p18 (InterPro:IPR010516), Histone deacetylase complex, SAP18 subunit (InterPro:IPR017250). & (gnl|cdd|87099 : 169.0) no description available & (gnl|cdd|38601 : 146.0) no description available & (reliability: 364.0) & (original description: Putative At2g45640, Description = Histone deacetylase complex subunit SAP18, PFAM = PF06487)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06512_334-3510' '(at4g17900 : 273.0) PLATZ transcription factor family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT1G32700.1); Has 399 Blast hits to 399 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 399; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 189.0) no description available & (reliability: 546.0) & (original description: Putative PLTZ2, Description = PLATZ transcription factor, PFAM = PF04640)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06517_71391-77292' '(at1g09920 : 233.0) TRAF-type zinc finger-related; BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT4G15420.1); Has 897 Blast hits to 860 proteins in 162 species: Archae - 0; Bacteria - 0; Metazoa - 570; Fungi - 106; Plants - 68; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative BnaC05g07400D, Description = BnaC05g07400D protein, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06518_28079-35983' '(at1g45207 : 207.0) Remorin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT4G36970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67381 : 83.1) no description available & (reliability: 414.0) & (original description: Putative PGSC0003DMG400004040, Description = Carboxy-terminal region remorin, PFAM = PF03763)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06525_123685-127067' '(at1g74120 : 372.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 15 (TAIR:AT5G54180.1); Has 926 Blast hits to 761 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 29; Fungi - 0; Plants - 888; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 744.0) & (original description: Putative MTERF15, Description = Transcription termination factor MTERF15, mitochondrial, PFAM = PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06590_702369-706319' '(gnl|cdd|86233 : 476.0) no description available & (gnl|cdd|37555 : 470.0) no description available & (at3g09520 : 434.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H4 (EXO70H4); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: stem, sperm cell, stamen, pollen tube; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H3 (TAIR:AT3G09530.1); Has 837 Blast hits to 827 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 71; Plants - 622; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 856.0) & (original description: Putative BnaA06g04270D, Description = BnaA06g04270D protein, PFAM = PF03081)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06625_255312-273317' '(at5g53540 : 570.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G27680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35956 : 434.0) no description available & (gnl|cdd|30812 : 204.0) no description available & (p54774|cdc48_soybn : 170.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 1138.0) & (original description: Putative atad1b, Description = ATPase family AAA domain-containing protein 1-B, PFAM = PF00004)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06626_95464-100570' '(at2g05160 : 458.0) CCCH-type zinc fingerfamily protein with RNA-binding domain; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G52980.1); Has 286 Blast hits to 218 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 277; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 916.0) & (original description: Putative At2g05160, Description = Zinc finger CCCH domain-containing protein 18, PFAM = PF12872;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06726_12805-15238' '(at3g18870 : 272.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, LP.02 two leaves visible; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G34620.1); Has 839 Blast hits to 671 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 0; Plants - 730; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|66247 : 107.0) no description available & (reliability: 544.0) & (original description: Putative At3g18870, Description = At3g18870, PFAM = PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06778_407970-414627' '(at2g24830 : 379.0) zinc finger (CCCH-type) family protein / D111/G-patch domain-containing protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), D111/G-patch (InterPro:IPR000467); Has 706 Blast hits to 687 proteins in 197 species: Archae - 0; Bacteria - 4; Metazoa - 400; Fungi - 113; Plants - 123; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|37396 : 310.0) no description available & (reliability: 758.0) & (original description: Putative Os02g0793000, Description = Zinc finger CCCH domain-containing protein 18, PFAM = PF01585)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf06933_211153-220677' '(at1g75340 : 164.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571). & (reliability: 328.0) & (original description: Putative CG1, Description = Zinc finger CCCH domain-containing protein 16, PFAM = PF00642)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07024_230744-235105' '(at1g53490 : 405.0) RING/U-box superfamily protein; Has 175 Blast hits to 173 proteins in 83 species: Archae - 2; Bacteria - 14; Metazoa - 69; Fungi - 24; Plants - 38; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 810.0) & (original description: Putative HEI10, Description = E3 ubiquitin-protein ligase CCNB1IP1 homolog, PFAM = PF14634)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07030_391701-399259' '(at1g32130 : 370.0) The C-terminal portion of this protein has high homology to the C-termini of the IWS1 (Interacts With Spt6) proteins found in yeast and humans. Interacts with transcription factor BES1. Involved in brassinosteroid-regulated gene expression.; IWS1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: brassinosteroid mediated signaling pathway, regulation of RNA elongation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923); BEST Arabidopsis thaliana protein match is: Transcription elongation factor (TFIIS) family protein (TAIR:AT4G19000.1). & (gnl|cdd|69433 : 266.0) no description available & (gnl|cdd|37004 : 252.0) no description available & (reliability: 740.0) & (original description: Putative IWS2, Description = INTERACTS WITH SPT6-like protein IWS2, PFAM = PF08711)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07051_39066-43993' '(at3g60400 : 530.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G06810.1); Has 395 Blast hits to 388 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 394; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 1060.0) & (original description: Putative MTERF18, Description = Transcription termination factor MTEF18, mitochondrial, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07054_91667-114221' '(at1g64830 : 349.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G33340.1); Has 3478 Blast hits to 3458 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 661; Fungi - 712; Plants - 1893; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36553 : 216.0) no description available & (gnl|cdd|84452 : 95.7) no description available & (reliability: 680.0) & (original description: Putative At2g35615, Description = Probable aspartic protease At2g35615, PFAM = PF14541;PF14543)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07054_137716-141062' '(at1g64830 : 325.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G33340.1); Has 3478 Blast hits to 3458 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 661; Fungi - 712; Plants - 1893; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36553 : 215.0) no description available & (gnl|cdd|84452 : 100.0) no description available & (reliability: 610.0) & (original description: Putative At2g28010, Description = Aspartyl protease-like protein, PFAM = PF14543;PF14541)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07058_550514-568868' '(at5g19420 : 902.0) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-related (InterPro:IPR017455), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Pleckstrin homology-type (InterPro:IPR011993), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G12350.1). & (gnl|cdd|34783 : 143.0) no description available & (gnl|cdd|36640 : 109.0) no description available & (reliability: 1804.0) & (original description: Putative PRAF1, Description = Regulator of chromosome condensation and FYVE zinc finger domain-containing protein, PFAM = PF13713;PF01363;PF08381;PF00415;PF00415;PF00415;PF00415;PF00415;PF00415)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07255_146789-151638' '(at2g21710 : 726.0) embryo defective 2219 (EMB2219); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT4G02990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66247 : 149.0) no description available & (gnl|cdd|36481 : 125.0) no description available & (reliability: 1452.0) & (original description: Putative MTERF2, Description = Transcription termination factor MTERF2, chloroplastic, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07365_81816-99477' '(at2g14255 : 694.0) Ankyrin repeat family protein with DHHC zinc finger domain; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein with DHHC zinc finger domain (TAIR:AT5G20350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35729 : 338.0) no description available & (gnl|cdd|34870 : 118.0) no description available & (reliability: 1388.0) & (original description: Putative PAT23, Description = Probable protein S-acyltransferase 23, PFAM = PF12796;PF12796;PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07457_202485-208443' '(at1g23750 : 136.0) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT1G10590.2); Has 249 Blast hits to 249 proteins in 61 species: Archae - 55; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative POPTR_0010s05070g, Description = DNA-binding family protein, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07466_505223-517513' '(at3g12680 : 508.0) Member of the floral homeotic AGAMOUS pathway.; ENHANCER OF AG-4 1 (HUA1); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT2G47850.3); Has 2136 Blast hits to 795 proteins in 118 species: Archae - 0; Bacteria - 0; Metazoa - 325; Fungi - 89; Plants - 1572; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (q9swf9|zfnl_pea : 185.0) Zinc finger CCCH domain-containing protein ZFN-like - Pisum sativum (Garden pea) & (gnl|cdd|36890 : 93.5) no description available & (reliability: 1016.0) & (original description: Putative HUA1, Description = Zinc finger CCCH domain-containing protein 37, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642;PF00642)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07474_36027-56329' '(at1g43850 : 489.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 978.0) & (original description: Putative SEU, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07590_280106-309123' '(at5g43100 : 737.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G50050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36553 : 241.0) no description available & (gnl|cdd|84452 : 126.0) no description available & (q6yny7|asp1_orysa : 109.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 1474.0) & (original description: Putative ASP2, Description = Aspartic proteinase-like protein 2, PFAM = PF14543;PF14541)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07743_121833-127487' '(at1g45207 : 177.0) Remorin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT4G36970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative PGSC0003DMG400004040, Description = Carboxy-terminal region remorin, PFAM = PF03763)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07788_260915-264021' '(at1g79220 : 344.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G64950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66247 : 156.0) no description available & (gnl|cdd|36481 : 102.0) no description available & (reliability: 688.0) & (original description: Putative BnaA07g34740D, Description = BnaA07g34740D protein, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07790_337509-345441' '(gnl|cdd|69947 : 442.0) no description available & (at4g21790 : 387.0) encodes a host factor that is required for TMV virus multiplication.; tobamovirus multiplication 1 (TOM1); INVOLVED IN: viral replication complex formation and maintenance; LOCATED IN: vacuolar membrane, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: tobamovirus multiplication protein 3 (TAIR:AT2G02180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 774.0) & (original description: Putative TOM1, Description = Tobamovirus multiplication protein 1, PFAM = PF06454)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07850_243783-250169' '(at2g36080 : 185.0) Encodes a plant-specific B3 DNA-binding domain transcription factor. Has transcription repressor activity.; AP2/B3-like transcriptional factor family protein; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G06250.2); Has 1372 Blast hits to 1370 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1372; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|85971 : 100.0) no description available & (reliability: 364.0) & (original description: Putative ARF32, Description = B3 domain-containing protein At3g11580, PFAM = PF02362)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07882_201109-203624' '(gnl|cdd|38383 : 154.0) no description available & (at1g51200 : 148.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT2G36320.1). & (q9llx1|isap1_orysa : 97.1) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (reliability: 296.0) & (original description: Putative SAP2, Description = Zinc finger A20 and AN1 domain-containing stress-associated protein 2, PFAM = PF01754;PF01428)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07899_23189-29886' '(at1g56460 : 150.0) HIT zinc finger ;PAPA-1-like conserved region; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, HIT-type (InterPro:IPR007529), PAPA-1-like conserved region (InterPro:IPR006880); BEST Arabidopsis thaliana protein match is: HIT zinc finger ;PAPA-1-like conserved region (TAIR:AT2G47350.1). & (gnl|cdd|68370 : 106.0) no description available & (reliability: 300.0) & (original description: Putative PAPA1, Description = PAPA-1-like family protein, PFAM = PF04795;PF04438)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07944_542126-558243' '(q8s4p6|ez1_maize : 811.0) Polycomb protein EZ1 (Enhancer of zeste protein 1) - Zea mays (Maize) & (at2g23380 : 810.0) Similar to the product of the Polycomb-group gene Enhancer of zeste. Required for stable repression of AG and AP3. Putative role in cell fate determination. Involved in the control of leaf morphogenesis. mutants exhibit curled, involute leaves. AGAMOUS and APETALA3 are ectopically expressed in the mutant.; CURLY LEAF (CLF); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain-containing protein (TAIR:AT4G02020.1); Has 5951 Blast hits to 5285 proteins in 534 species: Archae - 0; Bacteria - 530; Metazoa - 2584; Fungi - 730; Plants - 989; Viruses - 16; Other Eukaryotes - 1102 (source: NCBI BLink). & (gnl|cdd|36295 : 409.0) no description available & (gnl|cdd|47645 : 111.0) no description available & (reliability: 1620.0) & (original description: Putative CLF, Description = Histone-lysine N-methyltransferase CLF, PFAM = PF00856)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf07981_150993-154846' '(at1g21000 : 196.0) PLATZ transcription factor family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT1G76590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86704 : 166.0) no description available & (reliability: 392.0) & (original description: Putative PLTZ2, Description = PLATZ transcription factor, PFAM = PF04640)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08018_38853-41401' '(at3g48550 : 100.0) BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G01940.3); Has 78 Blast hits to 78 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative PGSC0003DMG400018091, Description = OSJNBa0044M19.6 protein, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08206_212655-217791' '(at1g01160 : 87.8) Arabidopsis thaliana GRF1-interacting factor 2 (GIF2) mRNA; GRF1-interacting factor 2 (GIF2); FUNCTIONS IN: protein binding, transcription coactivator activity; INVOLVED IN: cell proliferation, leaf development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SSXT (InterPro:IPR007726); BEST Arabidopsis thaliana protein match is: GRF1-interacting factor 3 (TAIR:AT4G00850.1); Has 35 Blast hits to 35 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 5; Plants - 17; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative AN3, Description = GRF1-interacting factor 2, PFAM = PF05030)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08390_631617-640948' '(at2g01650 : 431.0) encodes a peripheral membrane protein that contains UBX domain and interacts with AtCDC48 in vitro and co-fractionates with membrane-associated but not soluble AtCDC48 in vivo.; plant UBX domain-containing protein 2 (PUX2); CONTAINS InterPro DOMAIN/s: PUB domain (InterPro:IPR018997), UBX (InterPro:IPR001012), PUG domain (InterPro:IPR006567); BEST Arabidopsis thaliana protein match is: ubiquitin-associated (UBA)/TS-N domain-containing protein (TAIR:AT1G04850.1); Has 563 Blast hits to 563 proteins in 115 species: Archae - 0; Bacteria - 15; Metazoa - 269; Fungi - 22; Plants - 176; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|37910 : 184.0) no description available & (reliability: 862.0) & (original description: Putative PUX2, Description = Plant UBX domain-containing protein 2, PFAM = PF00789;PF09409)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08504_329348-334410' '(at3g51950 : 276.0) Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G63450.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 552.0) & (original description: Putative Os03g0328900, Description = Zinc finger CCCH domain-containing protein 22, PFAM = PF00642;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08519_312668-318547' '(at2g02160 : 266.0) CCCH-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 10885 Blast hits to 7444 proteins in 511 species: Archae - 23; Bacteria - 415; Metazoa - 5228; Fungi - 922; Plants - 581; Viruses - 184; Other Eukaryotes - 3532 (source: NCBI BLink). & (gnl|cdd|39988 : 173.0) no description available & (reliability: 532.0) & (original description: Putative At2g02160, Description = Zinc finger CCCH domain-containing protein 17, PFAM = PF14608;PF15663)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08566_323382-339018' '(gnl|cdd|69947 : 370.0) no description available & (at4g21790 : 333.0) encodes a host factor that is required for TMV virus multiplication.; tobamovirus multiplication 1 (TOM1); INVOLVED IN: viral replication complex formation and maintenance; LOCATED IN: vacuolar membrane, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: tobamovirus multiplication protein 3 (TAIR:AT2G02180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 666.0) & (original description: Putative TOM1, Description = Tobamovirus multiplication protein 1, PFAM = PF06454)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08581_179949-182581' '(at4g30410 : 98.2) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative MTR_4g129560, Description = Sequence-specific DNA-binding transcription factors protein, putative, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08587_4230-9621' '(at2g45820 : 101.0) Remorin family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G61260.1); Has 2543 Blast hits to 1840 proteins in 340 species: Archae - 2; Bacteria - 408; Metazoa - 392; Fungi - 191; Plants - 500; Viruses - 4; Other Eukaryotes - 1046 (source: NCBI BLink). & (p93788|remo_soltu : 101.0) Remorin (pp34) - Solanum tuberosum (Potato) & (reliability: 200.0) & (original description: Putative rem-2, Description = Remorin 2, PFAM = PF03763;PF03766)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08617_142951-148869' '(at5g10770 : 443.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: DNA binding, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G10760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36553 : 219.0) no description available & (gnl|cdd|84452 : 93.8) no description available & (q6yny7|asp1_orysa : 80.1) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 886.0) & (original description: Putative cnd41, Description = Aspartic proteinase nepenthesin-2, PFAM = PF14541;PF14543)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08651_458768-465483' '(at1g23280 : 290.0) MAK16 protein-related; CONTAINS InterPro DOMAIN/s: Mak16 protein (InterPro:IPR006958); Has 4868 Blast hits to 3538 proteins in 334 species: Archae - 9; Bacteria - 248; Metazoa - 1831; Fungi - 653; Plants - 272; Viruses - 128; Other Eukaryotes - 1727 (source: NCBI BLink). & (gnl|cdd|38274 : 286.0) no description available & (gnl|cdd|68448 : 281.0) no description available & (reliability: 580.0) & (original description: Putative MAK16, Description = Protein MAK16 homolog, PFAM = PF01778;PF04874)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08702_70573-77320' '(at5g04270 : 285.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G09320.1); Has 5087 Blast hits to 5085 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 2174; Fungi - 756; Plants - 837; Viruses - 0; Other Eukaryotes - 1320 (source: NCBI BLink). & (gnl|cdd|36529 : 204.0) no description available & (gnl|cdd|34870 : 114.0) no description available & (reliability: 570.0) & (original description: Putative PAT15, Description = Probable protein S-acyltransferase 15, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08709_175503-178804' '(at2g39710 : 545.0) Encodes a Cysteine-rich peptide (CRP) family protein; Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G02190.1); Has 2560 Blast hits to 2551 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 620; Fungi - 65; Plants - 1821; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|36553 : 188.0) no description available & (gnl|cdd|84452 : 83.8) no description available & (reliability: 992.0) & (original description: Putative PCS1, Description = Aspartic proteinase PCS1, PFAM = PF14541;PF14543)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08855_147258-152047' '(at2g01818 : 170.0) PLATZ transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT3G60670.1); Has 397 Blast hits to 397 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 397; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 109.0) no description available & (reliability: 340.0) & (original description: Putative BnaA06g34640D, Description = BnaA06g34640D protein, PFAM = PF04640)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08859_32596-39197' '(at5g19350 : 442.0) RNA-binding (RRM/RBD/RNP motifs) family protein; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 29846 Blast hits to 17541 proteins in 840 species: Archae - 12; Bacteria - 2412; Metazoa - 15092; Fungi - 3490; Plants - 6065; Viruses - 0; Other Eukaryotes - 2775 (source: NCBI BLink). & (gnl|cdd|35370 : 146.0) no description available & (gnl|cdd|31068 : 96.7) no description available & (q08937|roc2_nicsy : 89.4) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B) - Nicotiana sylvestris (Wood tobacco) & (reliability: 884.0) & (original description: Putative nbp1, Description = Polyadenylate-binding protein RBP47B, PFAM = PF00076;PF00076;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08872_19090-24515' '(at5g61190 : 266.0) putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain; FUNCTIONS IN: zinc ion binding, nucleic acid binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT3G62200.1); Has 3024 Blast hits to 2428 proteins in 238 species: Archae - 10; Bacteria - 118; Metazoa - 1187; Fungi - 140; Plants - 554; Viruses - 10; Other Eukaryotes - 1005 (source: NCBI BLink). & (gnl|cdd|86646 : 203.0) no description available & (reliability: 532.0) & (original description: Putative BnaA09g39750D, Description = BnaA09g39750D protein, PFAM = PF14418;PF01936)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08890_19911-26129' '(at1g31040 : 100.0) PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT2G12646.1); Has 411 Blast hits to 411 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 411; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86704 : 88.0) no description available & (reliability: 200.0) & (original description: Putative PGSC0003DMG400038899, Description = PLATZ transcription factor family protein, PFAM = PF04640)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08892_1821-23178' '(at1g70810 : 213.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G70800.1); Has 2955 Blast hits to 2573 proteins in 230 species: Archae - 0; Bacteria - 3; Metazoa - 1505; Fungi - 422; Plants - 763; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (gnl|cdd|36248 : 194.0) no description available & (gnl|cdd|84577 : 80.4) no description available & (reliability: 426.0) & (original description: Putative CAR10, Description = Protein C2-DOMAIN ABA-RELATED 10, PFAM = PF00168)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08894_32933-44293' '(at1g07705 : 650.0) NOT2 / NOT3 / NOT5 family; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282); BEST Arabidopsis thaliana protein match is: VIRE2 interacting protein 2 (TAIR:AT5G59710.1); Has 3259 Blast hits to 2610 proteins in 429 species: Archae - 0; Bacteria - 983; Metazoa - 821; Fungi - 441; Plants - 185; Viruses - 8; Other Eukaryotes - 821 (source: NCBI BLink). & (gnl|cdd|86562 : 196.0) no description available & (gnl|cdd|37361 : 97.8) no description available & (reliability: 1234.0) & (original description: Putative VIP2, Description = Probable NOT transcription complex subunit VIP2, PFAM = PF04153)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf08984_147852-163794' '(at3g18620 : 336.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein with DHHC zinc finger domain (TAIR:AT2G14255.1); Has 4961 Blast hits to 4959 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 2163; Fungi - 692; Plants - 838; Viruses - 0; Other Eukaryotes - 1268 (source: NCBI BLink). & (gnl|cdd|36527 : 187.0) no description available & (gnl|cdd|34870 : 86.2) no description available & (reliability: 672.0) & (original description: Putative PAT11, Description = Protein S-acyltransferase 11, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09063_29224-37201' '(at1g43850 : 282.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 564.0) & (original description: Putative M7J2, Description = Transcriptional corepressor SEUSS, PFAM = PF01803)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09087_120869-124020' '(at1g21150 : 147.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 922 Blast hits to 791 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 903; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|36481 : 92.5) no description available & (gnl|cdd|66247 : 87.3) no description available & (reliability: 294.0) & (original description: Putative PGSC0003DMG400027560, Description = Putative ovule protein, PFAM = PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09130_153779-161213' '(at5g45550 : 423.0) Mob1/phocein family protein; CONTAINS InterPro DOMAIN/s: Mob1/phocein (InterPro:IPR005301); BEST Arabidopsis thaliana protein match is: Mob1/phocein family protein (TAIR:AT4G19045.1); Has 1269 Blast hits to 1261 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 709; Fungi - 290; Plants - 115; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|35661 : 337.0) no description available & (gnl|cdd|86392 : 258.0) no description available & (reliability: 824.0) & (original description: Putative MOB1A, Description = MOB kinase activator-like 1A, PFAM = PF03637)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09189_11426-13923' '(at1g12440 : 141.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT4G12040.2); Has 1075 Blast hits to 1057 proteins in 149 species: Archae - 0; Bacteria - 0; Metazoa - 452; Fungi - 9; Plants - 482; Viruses - 6; Other Eukaryotes - 126 (source: NCBI BLink). & (gnl|cdd|38383 : 140.0) no description available & (q9llx1|isap1_orysa : 94.4) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (reliability: 282.0) & (original description: Putative SAP7, Description = Zinc finger A20 and AN1 domain-containing stress-associated protein 7, PFAM = PF01754;PF01428)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09401_25757-39210' '(at3g56330 : 468.0) N2,N2-dimethylguanosine tRNA methyltransferase; FUNCTIONS IN: RNA binding, tRNA (guanine-N2-)-methyltransferase activity; INVOLVED IN: tRNA processing; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: N2,N2-dimethylguanosine tRNA methyltransferase (InterPro:IPR002905); BEST Arabidopsis thaliana protein match is: N2,N2-dimethylguanosine tRNA methyltransferase (TAIR:AT5G15810.1); Has 951 Blast hits to 937 proteins in 347 species: Archae - 257; Bacteria - 66; Metazoa - 191; Fungi - 140; Plants - 103; Viruses - 0; Other Eukaryotes - 194 (source: NCBI BLink). & (gnl|cdd|36467 : 262.0) no description available & (gnl|cdd|32052 : 225.0) no description available & (reliability: 936.0) & (original description: Putative trm1, Description = tRNA (Guanine26-N2/guanine27-N2)-dimethyltransferase Trm1, PFAM = PF02005)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09452_121601-141551' '(at5g43100 : 725.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G50050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36553 : 258.0) no description available & (gnl|cdd|84452 : 133.0) no description available & (q6yny7|asp1_orysa : 111.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 1450.0) & (original description: Putative At3g50050, Description = Putative uncharacterized protein At3g50050, PFAM = PF14543;PF14541)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09489_47337-54398' '(at4g06634 : 379.0) zinc finger (C2H2 type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, C2H2-type/integrase, DNA-binding (InterPro:IPR013087); BEST Arabidopsis thaliana protein match is: Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein (TAIR:AT5G04240.1). & (reliability: 758.0) & (original description: Putative pho, Description = Transcriptional repressor protein YY1, PFAM = PF00096;PF00096;PF00096)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09489_68276-72658' '(gnl|cdd|38514 : 143.0) no description available & (at1g16430 : 139.0) Surfeit locus protein 5 subunit 22 of Mediator complex; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med22 (InterPro:IPR009332); BEST Arabidopsis thaliana protein match is: Surfeit locus protein 5 subunit 22 of Mediator complex (TAIR:AT1G07950.1); Has 238 Blast hits to 238 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 161; Fungi - 12; Plants - 53; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|69686 : 135.0) no description available & (reliability: 278.0) & (original description: Putative MED22B, Description = Mediator of RNA polymerase II transcription subunit 22b, PFAM = PF06179)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09534_50880-67114' '(at3g60800 : 440.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT4G22750.1); Has 5091 Blast hits to 5089 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 2186; Fungi - 767; Plants - 823; Viruses - 0; Other Eukaryotes - 1315 (source: NCBI BLink). & (gnl|cdd|36529 : 280.0) no description available & (gnl|cdd|34870 : 121.0) no description available & (reliability: 880.0) & (original description: Putative PAT14, Description = Probable protein S-acyltransferase 14, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09628_63936-71196' '(at1g32130 : 373.0) The C-terminal portion of this protein has high homology to the C-termini of the IWS1 (Interacts With Spt6) proteins found in yeast and humans. Interacts with transcription factor BES1. Involved in brassinosteroid-regulated gene expression.; IWS1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: brassinosteroid mediated signaling pathway, regulation of RNA elongation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923); BEST Arabidopsis thaliana protein match is: Transcription elongation factor (TFIIS) family protein (TAIR:AT4G19000.1). & (gnl|cdd|69433 : 265.0) no description available & (gnl|cdd|37004 : 251.0) no description available & (reliability: 746.0) & (original description: Putative IWS1, Description = Transcription elongation factor (TFIIS) family protein, PFAM = PF08711)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09698_59031-64840' '(at2g41835 : 307.0) zinc finger (C2H2 type, AN1-like) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type, AN1-like) family protein (TAIR:AT3G57480.1); Has 760 Blast hits to 744 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 485; Fungi - 122; Plants - 83; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|38393 : 171.0) no description available & (reliability: 614.0) & (original description: Putative SAP16, Description = Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16, PFAM = PF01428;PF01428)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09767_108148-112506' '(at1g49920 : 88.2) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative , Description = , PFAM = PF03108;PF04434)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09812_49576-61540' '(at1g20110 : 472.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT3G14270.1); Has 29282 Blast hits to 20083 proteins in 828 species: Archae - 11; Bacteria - 1932; Metazoa - 10999; Fungi - 6486; Plants - 4104; Viruses - 590; Other Eukaryotes - 5160 (source: NCBI BLink). & (gnl|cdd|85407 : 93.5) no description available & (reliability: 944.0) & (original description: Putative Sb02g037120, Description = Putative uncharacterized protein Sb02g037120, PFAM = PF01363;PF08416)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf09869_135644-144518' '(at3g56930 : 496.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G05070.1). & (gnl|cdd|36525 : 237.0) no description available & (gnl|cdd|34870 : 119.0) no description available & (reliability: 992.0) & (original description: Putative PGSC0003DMG400007187, Description = S-acyltransferase, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf10015_974619-978556' '(at3g55150 : 583.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H1 (EXO70H1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, exocyst; EXPRESSED IN: sperm cell, root, pollen tube; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H2 (TAIR:AT2G39380.1); Has 814 Blast hits to 800 proteins in 89 species: Archae - 0; Bacteria - 0; Metazoa - 134; Fungi - 34; Plants - 631; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|86233 : 512.0) no description available & (gnl|cdd|37555 : 507.0) no description available & (reliability: 1166.0) & (original description: Putative EXO70H2, Description = Exocyst subunit exo70 family protein H2, PFAM = PF03081)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf10048_337343-342308' '(at2g05160 : 469.0) CCCH-type zinc fingerfamily protein with RNA-binding domain; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G52980.1); Has 286 Blast hits to 218 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 277; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 938.0) & (original description: Putative At2g05160, Description = Zinc finger CCCH domain-containing protein 18, PFAM = PF00076;PF12872)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf10056_90722-103359' '(at4g38170 : 598.0) FAR1-related sequence 9 (FRS9); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PMZ-type (InterPro:IPR006564), MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 5 (TAIR:AT4G38180.1); Has 1073 Blast hits to 1051 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 2; Plants - 1067; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1196.0) & (original description: Putative FRS9, Description = Protein FAR1-RELATED SEQUENCE 9, PFAM = PF10551;PF04434)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf10067_96-3283' '(at5g64950 : 261.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36481 : 112.0) no description available & (gnl|cdd|66247 : 107.0) no description available & (reliability: 522.0) & (original description: Putative At5g64950, Description = Emb}, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf10203_2180-7355' '(at1g65260 : 204.0) Encodes a protein required for thylakoid membrane formation.; plastid transcriptionally active 4 (PTAC4); INVOLVED IN: vesicle organization, thylakoid membrane organization; LOCATED IN: in 8 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PspA/IM30 (InterPro:IPR007157); Has 3123 Blast hits to 3108 proteins in 1139 species: Archae - 38; Bacteria - 2412; Metazoa - 160; Fungi - 68; Plants - 89; Viruses - 95; Other Eukaryotes - 261 (source: NCBI BLink). & (q8s0j7|im30_orysa : 198.0) Probable membrane-associated 30 kDa protein, chloroplast precursor - Oryza sativa (Rice) & (reliability: 408.0) & (original description: Putative pspA, Description = Phage shock protein A, PspA, PFAM = PF04012)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf10305_89330-94448' '(at5g05070 : 456.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT2G40990.1); Has 5095 Blast hits to 5086 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 2194; Fungi - 760; Plants - 842; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink). & (gnl|cdd|36525 : 226.0) no description available & (gnl|cdd|34870 : 113.0) no description available & (reliability: 912.0) & (original description: Putative PAT03, Description = Probable protein S-acyltransferase 3, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf10305_137887-145505' '(at3g56930 : 499.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G05070.1). & (gnl|cdd|36525 : 238.0) no description available & (gnl|cdd|34870 : 117.0) no description available & (reliability: 998.0) & (original description: Putative PAT03, Description = Probable protein S-acyltransferase 3, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf10579_204759-213445' '(at3g48050 : 1064.0) BAH domain ;TFIIS helical bundle-like domain; FUNCTIONS IN: transcription regulator activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type (InterPro:IPR003617), Transcription factor IIS, N-terminal (InterPro:IPR017923), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: BAH domain ;TFIIS helical bundle-like domain (TAIR:AT3G48060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37097 : 249.0) no description available & (gnl|cdd|72853 : 189.0) no description available & (reliability: 2128.0) & (original description: Putative BnaA09g06260D, Description = BnaA09g06260D protein, PFAM = PF08711;PF01426)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf10630_296263-301325' '(at3g43230 : 665.0) RING/FYVE/PHD-type zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Ysc84 actin-binding domain (InterPro:IPR007461); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD-type zinc finger family protein (TAIR:AT1G29800.1); Has 4080 Blast hits to 3974 proteins in 331 species: Archae - 0; Bacteria - 230; Metazoa - 2175; Fungi - 711; Plants - 392; Viruses - 3; Other Eukaryotes - 569 (source: NCBI BLink). & (gnl|cdd|37054 : 397.0) no description available & (gnl|cdd|67959 : 162.0) no description available & (reliability: 1330.0) & (original description: Putative Sb02g039290, Description = Putative uncharacterized protein Sb02g039290, PFAM = PF01363;PF04366)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf10877_64717-77396' '(at5g56900 : 770.0) CwfJ-like family protein / zinc finger (CCCH-type) family protein; FUNCTIONS IN: zinc ion binding, catalytic activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Histidine triad-like motif (InterPro:IPR011146), Cwf19-like, C-terminal domain-1 (InterPro:IPR006768), Cwf19-like protein, C-terminal domain-2 (InterPro:IPR006767); BEST Arabidopsis thaliana protein match is: CwfJ-like family protein (TAIR:AT1G56290.1); Has 929 Blast hits to 786 proteins in 187 species: Archae - 0; Bacteria - 11; Metazoa - 341; Fungi - 367; Plants - 103; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|37687 : 506.0) no description available & (gnl|cdd|86708 : 131.0) no description available & (reliability: 1540.0) & (original description: Putative At5g56900, Description = Zinc finger CCCH domain-containing protein 64, PFAM = PF04676;PF04677)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf10968_402271-404723' '(at3g12630 : 113.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT2G36320.1); Has 1013 Blast hits to 1009 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 428; Fungi - 9; Plants - 446; Viruses - 6; Other Eukaryotes - 124 (source: NCBI BLink). & (q9llx1|isap1_orysa : 92.4) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (gnl|cdd|38383 : 91.3) no description available & (reliability: 226.0) & (original description: Putative SAP5, Description = Zinc finger A20 and AN1 domain-containing stress-associated protein 5, PFAM = PF01428)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf11019_109177-117133' '(at5g59730 : 128.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H7 (EXO70H7); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, exocyst; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H6 (TAIR:AT1G07725.1); Has 772 Blast hits to 760 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 133; Fungi - 5; Plants - 633; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|37555 : 122.0) no description available & (gnl|cdd|86233 : 113.0) no description available & (reliability: 256.0) & (original description: Putative EXO70H1, Description = Exocyst subunit exo70 family protein, PFAM = PF03081)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf11061_1626-26002' '(gnl|cdd|69947 : 367.0) no description available & (at4g21790 : 335.0) encodes a host factor that is required for TMV virus multiplication.; tobamovirus multiplication 1 (TOM1); INVOLVED IN: viral replication complex formation and maintenance; LOCATED IN: vacuolar membrane, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: tobamovirus multiplication protein 3 (TAIR:AT2G02180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 670.0) & (original description: Putative TOM1, Description = Tobamovirus multiplication protein 1, PFAM = PF06454)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf11103_230140-237903' '(at2g32080 : 417.0) similar to the conserved animal nuclear protein PUR alpha which was implicated in the control of gene transcription and DNA replication; purin-rich alpha 1 (PUR ALPHA-1); FUNCTIONS IN: nucleic acid binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PUR-alpha/beta/gamma, DNA/RNA-binding (InterPro:IPR006628); Has 588 Blast hits to 332 proteins in 74 species: Archae - 0; Bacteria - 31; Metazoa - 438; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|38284 : 214.0) no description available & (gnl|cdd|68420 : 105.0) no description available & (reliability: 834.0) & (original description: Putative PURA1, Description = Transcription factor Pur-alpha 1, PFAM = PF04845;PF04845)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf11153_105493-119417' '(at1g78930 : 511.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G21710.1); Has 1485 Blast hits to 916 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 111; Fungi - 0; Plants - 1282; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (gnl|cdd|66247 : 193.0) no description available & (gnl|cdd|36481 : 102.0) no description available & (reliability: 1022.0) & (original description: Putative mterf3, Description = mTERF domain-containing protein, mitochondrial, PFAM = PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf11168_19908-24384' '(at2g36930 : 160.0) zinc finger (C2H2 type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); Has 726 Blast hits to 418 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 301; Fungi - 225; Plants - 112; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|38618 : 93.2) no description available & (reliability: 320.0) & (original description: Putative Os08g0564500, Description = Os08g0564500 protein, PFAM = PF12171)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf11361_230047-234604' '(at4g02220 : 453.0) zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Programmed cell death protein 2, C-terminal (InterPro:IPR007320), Zinc finger, MYND-type (InterPro:IPR002893); BEST Arabidopsis thaliana protein match is: programmed cell death 2 C-terminal domain-containing protein (TAIR:AT5G64830.1); Has 934 Blast hits to 894 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 394; Fungi - 162; Plants - 228; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|37272 : 268.0) no description available & (gnl|cdd|67794 : 97.2) no description available & (reliability: 906.0) & (original description: Putative At4g02220, Description = MYND type zinc finger and programmed cell death 2 C-terminal domain-containing protein, PFAM = PF04194;PF01753)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf11702_32077-36405' '(at5g26600 : 565.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT3G62130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36762 : 304.0) no description available & (gnl|cdd|30866 : 138.0) no description available & (reliability: 1056.0) & (original description: Putative cef1, Description = Isopenicillin N epimerase, PFAM = PF00266)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf11996_44139-49322' '(at1g04500 : 181.0) CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT2G33350.2); Has 1789 Blast hits to 1789 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 2; Plants - 1654; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|87043 : 81.0) no description available & (reliability: 362.0) & (original description: Putative ASL2, Description = CCT motif family protein, PFAM = PF06203)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf12127_50168-52746' '(at3g12630 : 102.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT2G36320.1); Has 1013 Blast hits to 1009 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 428; Fungi - 9; Plants - 446; Viruses - 6; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|38383 : 97.0) no description available & (q9llx1|isap1_orysa : 84.0) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (reliability: 204.0) & (original description: Putative AN1, Description = Zinc finger protein, PFAM = PF01428)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf12159_993692-1014538' '(at2g30580 : 423.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 2 (DRIP2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 1 (TAIR:AT1G06770.1); Has 1631 Blast hits to 1626 proteins in 163 species: Archae - 0; Bacteria - 2; Metazoa - 1227; Fungi - 58; Plants - 232; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|37871 : 137.0) no description available & (reliability: 804.0) & (original description: Putative DRIP2, Description = E3 ubiquitin protein ligase DRIP2, PFAM = PF13923)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf12320_179396-193385' '(at5g19420 : 1556.0) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-related (InterPro:IPR017455), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Pleckstrin homology-type (InterPro:IPR011993), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G12350.1). & (gnl|cdd|34783 : 128.0) no description available & (gnl|cdd|36640 : 121.0) no description available & (reliability: 3112.0) & (original description: Putative PRAF1, Description = Regulator of chromosome condensation and FYVE zinc finger domain-containing protein, PFAM = PF08381;PF00415;PF00415;PF00415;PF00415;PF00415;PF00415;PF13713;PF16457;PF01363;PF16627)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf12415_22929-26698' '(at1g70810 : 198.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G70800.1); Has 2955 Blast hits to 2573 proteins in 230 species: Archae - 0; Bacteria - 3; Metazoa - 1505; Fungi - 422; Plants - 763; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (gnl|cdd|36248 : 181.0) no description available & (reliability: 396.0) & (original description: Putative C2, Description = GTPase activating protein 1, PFAM = PF00168)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf12582_5069-7524' '(at2g36320 : 149.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT3G52800.1); Has 1065 Blast hits to 1046 proteins in 150 species: Archae - 2; Bacteria - 0; Metazoa - 450; Fungi - 9; Plants - 480; Viruses - 6; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|38383 : 147.0) no description available & (q9llx1|isap1_orysa : 97.8) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (reliability: 298.0) & (original description: Putative SAP4, Description = Zinc finger A20 and AN1 domain-containing stress-associated protein 4, PFAM = PF01428;PF01754)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf12639_5028-13231' '(at5g18550 : 352.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT3G06410.1); Has 2990 Blast hits to 1278 proteins in 210 species: Archae - 0; Bacteria - 30; Metazoa - 599; Fungi - 302; Plants - 1043; Viruses - 0; Other Eukaryotes - 1016 (source: NCBI BLink). & (q5naw2|zfnl1_orysa : 341.0) Zinc finger CCCH domain-containing protein ZFN-like 1 - Oryza sativa (Rice) & (gnl|cdd|36890 : 111.0) no description available & (reliability: 694.0) & (original description: Putative At5g18550, Description = Zinc finger CCCH domain-containing protein 58, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf12715_118958-129512' '(at5g56930 : 147.0) embryo defective 1789 (emb1789); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 4013 Blast hits to 1845 proteins in 273 species: Archae - 0; Bacteria - 114; Metazoa - 1017; Fungi - 647; Plants - 283; Viruses - 3; Other Eukaryotes - 1949 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative emb1789, Description = Zinc finger CCCH domain-containing protein 7, PFAM = PF00642)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf12825_14272-16775' '(at1g51200 : 151.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT2G36320.1). & (gnl|cdd|38383 : 146.0) no description available & (q9llx1|isap1_orysa : 107.0) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (reliability: 302.0) & (original description: Putative SAP9, Description = Zinc finger A20 and AN1 domain-containing stress-associated protein 9, PFAM = PF01428;PF01754)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf12835_34771-49872' '(at4g23540 : 772.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), Domain of unknown function, NUC173 (InterPro:IPR012978); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G34357.1); Has 378 Blast hits to 366 proteins in 171 species: Archae - 0; Bacteria - 6; Metazoa - 125; Fungi - 137; Plants - 63; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (gnl|cdd|36462 : 298.0) no description available & (gnl|cdd|87454 : 110.0) no description available & (reliability: 1544.0) & (original description: Putative , Description = , PFAM = PF08161)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf12994_69504-72919' '(at1g25510 : 414.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G18490.1); Has 4139 Blast hits to 4120 proteins in 342 species: Archae - 0; Bacteria - 0; Metazoa - 1183; Fungi - 740; Plants - 2035; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|36553 : 235.0) no description available & (reliability: 824.0) & (original description: Putative nep2, Description = Aspartic proteinase nepenthesin-1, PFAM = PF14543;PF14541)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf13268_64622-68529' '(at3g09520 : 587.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H4 (EXO70H4); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: stem, sperm cell, stamen, pollen tube; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H3 (TAIR:AT3G09530.1); Has 837 Blast hits to 827 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 71; Plants - 622; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|37555 : 526.0) no description available & (gnl|cdd|86233 : 522.0) no description available & (reliability: 1068.0) & (original description: Putative ACI49, Description = ACI49, PFAM = PF03081)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf13762_169389-175939' '(at4g27000 : 390.0) ATRBP45C; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35370 : 135.0) no description available & (gnl|cdd|31068 : 92.0) no description available & (p19683|roc4_nicsy : 82.8) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 780.0) & (original description: Putative RBP45, Description = Polyadenylate-binding protein RBP45, PFAM = PF00076;PF00076;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf13950_169630-175663' '(at1g21150 : 139.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 922 Blast hits to 791 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 903; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|66247 : 96.6) no description available & (gnl|cdd|36481 : 92.1) no description available & (reliability: 278.0) & (original description: Putative PGSC0003DMG400015070, Description = Putative ovule protein, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf14042_63259-66578' '(at2g39710 : 540.0) Encodes a Cysteine-rich peptide (CRP) family protein; Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G02190.1); Has 2560 Blast hits to 2551 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 620; Fungi - 65; Plants - 1821; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|36553 : 192.0) no description available & (gnl|cdd|84452 : 93.8) no description available & (reliability: 1062.0) & (original description: Putative PCS1, Description = Aspartic proteinase PCS1, PFAM = PF14543;PF14541)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf15360_45141-54318' '(at4g32720 : 367.0) Encodes AtLa1, a member of the highly abundant phosphoprotein La proteins. Predominantly localized to the nucleoplasm and was also detected in the nucleolar cavity. Has RNA binding activity. Required for normal ribosome biogenesis and embryogenesis.; La protein 1 (La1); FUNCTIONS IN: RNA binding; INVOLVED IN: embryo development, ribosome biogenesis; LOCATED IN: nucleoplasm, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA-binding motif (InterPro:IPR014886); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT1G79880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47984 : 89.5) no description available & (gnl|cdd|37066 : 84.4) no description available & (reliability: 734.0) & (original description: Putative LA1, Description = La protein 1, PFAM = PF08777;PF00076;PF05383)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf15538_30780-34760' '(at4g17600 : 249.0) Encodes Lil3:1 (light-harvesting-like) protein. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. A generic LHC motif is present in Lil3:1.; LIL3:1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT5G47110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 494.0) & (original description: Putative Lil3:1, Description = AT4g17600/dl4835w, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf15568_121138-126652' '(at3g48940 : 105.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT5G23750.2); Has 1837 Blast hits to 1261 proteins in 238 species: Archae - 1; Bacteria - 261; Metazoa - 152; Fungi - 115; Plants - 477; Viruses - 0; Other Eukaryotes - 831 (source: NCBI BLink). & (p93788|remo_soltu : 102.0) Remorin (pp34) - Solanum tuberosum (Potato) & (reliability: 210.0) & (original description: Putative REM1, Description = Remorin 1, PFAM = PF03766;PF03763)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf15653_81353-93154' '(at3g58130 : 312.0) N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: N-acetylglucosaminyl phosphatidylinositol deacetylase (InterPro:IPR003737); BEST Arabidopsis thaliana protein match is: N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein (TAIR:AT2G27340.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38542 : 248.0) no description available & (gnl|cdd|66288 : 98.5) no description available & (reliability: 624.0) & (original description: Putative LOC100283695, Description = N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, PFAM = PF02585)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf15694_81217-85938' '(at3g53680 : 245.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (TAIR:AT2G37520.1); Has 3364 Blast hits to 2813 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 239; Plants - 706; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative TCM_040248, Description = Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain, putative, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf15972_353089-356478' '(at5g61010 : 272.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein E2 (EXO70E2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, exocyst; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein E1 (TAIR:AT3G29400.1); Has 800 Blast hits to 794 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 141; Fungi - 13; Plants - 637; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|37555 : 197.0) no description available & (gnl|cdd|86233 : 135.0) no description available & (reliability: 544.0) & (original description: Putative BnaC02g37970D, Description = Exocyst complex component 7, PFAM = PF03081)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf16022_233313-240704' '(at4g22910 : 653.0) FIZZY-related 2 (FZR2); FUNCTIONS IN: signal transducer activity; INVOLVED IN: trichome branching, signal transduction, DNA endoreduplication, cell growth; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: cell cycle switch protein 52 A2 (TAIR:AT4G11920.1); Has 43458 Blast hits to 22953 proteins in 693 species: Archae - 46; Bacteria - 6865; Metazoa - 16440; Fungi - 9775; Plants - 5102; Viruses - 0; Other Eukaryotes - 5230 (source: NCBI BLink). & (gnl|cdd|35526 : 474.0) no description available & (gnl|cdd|29257 : 136.0) no description available & (reliability: 1286.0) & (original description: Putative FZR2, Description = Protein FIZZY-RELATED 2, PFAM = PF12894;PF00400;PF00400;PF00400)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf16127_8294-16196' '(at2g47850 : 331.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1); Has 1724 Blast hits to 1003 proteins in 159 species: Archae - 0; Bacteria - 7; Metazoa - 368; Fungi - 218; Plants - 971; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (q5naw2|zfnl1_orysa : 300.0) Zinc finger CCCH domain-containing protein ZFN-like 1 - Oryza sativa (Rice) & (gnl|cdd|36890 : 101.0) no description available & (reliability: 662.0) & (original description: Putative Os01g0257400, Description = Zinc finger CCCH domain-containing protein 5, PFAM = PF00642;PF00642;PF00642;PF00642;PF00642)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf16197_336556-340199' '(at3g59080 : 632.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: DNA binding, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT2G42980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36553 : 265.0) no description available & (gnl|cdd|84452 : 90.7) no description available & (reliability: 1264.0) & (original description: Putative ACRE36, Description = Avr9/Cf-9 rapidly elicited protein 36, PFAM = PF14543;PF14541)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf16530_66149-77564' '(at4g17600 : 218.0) Encodes Lil3:1 (light-harvesting-like) protein. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. A generic LHC motif is present in Lil3:1.; LIL3:1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT5G47110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative LIL3:1, Description = Lil3 protein, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf17127_31534-46685' '(p93788|remo_soltu : 109.0) Remorin (pp34) - Solanum tuberosum (Potato) & (at3g48940 : 89.7) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT5G23750.2); Has 1837 Blast hits to 1261 proteins in 238 species: Archae - 1; Bacteria - 261; Metazoa - 152; Fungi - 115; Plants - 477; Viruses - 0; Other Eukaryotes - 831 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative DBP, Description = Remorin, PFAM = PF03763;PF03766)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf17473_35109-46600' '(at5g58470 : 177.0) TBP-associated factor 15B (TAF15b); FUNCTIONS IN: binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: TBP-associated factor 15 (TAIR:AT1G50300.1); Has 115051 Blast hits to 45140 proteins in 2321 species: Archae - 166; Bacteria - 28654; Metazoa - 42717; Fungi - 9006; Plants - 12716; Viruses - 1451; Other Eukaryotes - 20341 (source: NCBI BLink). & (gnl|cdd|36139 : 83.0) no description available & (reliability: 354.0) & (original description: Putative TAF15B, Description = Transcription initiation factor TFIID subunit 15b, PFAM = PF00641;PF00076)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf18157_2764-6719' '(at1g68200 : 187.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G66810.1); Has 1170 Blast hits to 1062 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 455; Fungi - 97; Plants - 305; Viruses - 0; Other Eukaryotes - 313 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative At1g68200, Description = Zinc finger CCCH domain-containing protein 15, PFAM = PF00642)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf18268_7170-25797' '(at5g15810 : 852.0) N2,N2-dimethylguanosine tRNA methyltransferase; FUNCTIONS IN: RNA binding, tRNA (guanine-N2-)-methyltransferase activity; INVOLVED IN: tRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: N2,N2-dimethylguanosine tRNA methyltransferase (InterPro:IPR002905); BEST Arabidopsis thaliana protein match is: N2,N2-dimethylguanosine tRNA methyltransferase (TAIR:AT3G02320.1); Has 1017 Blast hits to 963 proteins in 359 species: Archae - 255; Bacteria - 70; Metazoa - 198; Fungi - 150; Plants - 103; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink). & (gnl|cdd|36467 : 613.0) no description available & (gnl|cdd|85826 : 338.0) no description available & (reliability: 1704.0) & (original description: Putative trmt1, Description = tRNA (Guanine(26)-N(2))-dimethyltransferase, PFAM = PF02005)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf18401_51459-55139' '(at1g09750 : 457.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G54400.1); Has 2762 Blast hits to 2753 proteins in 256 species: Archae - 0; Bacteria - 2; Metazoa - 415; Fungi - 350; Plants - 1861; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink). & (gnl|cdd|36553 : 186.0) no description available & (reliability: 914.0) & (original description: Putative cpa63, Description = Aspartic proteinase nepenthesin-1, PFAM = PF14541;PF14543)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf18513_1-4727' '(at3g17611 : 355.0) RHOMBOID-like protein 14 (RBL14); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); Has 157 Blast hits to 157 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 77; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|37843 : 170.0) no description available & (reliability: 710.0) & (original description: Putative RBL14, Description = Rhomboid-like protein 14, mitochondrial, PFAM = PF01694;PF00641)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf20097_66767-72155' '(at1g64260 : 151.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 117.0) no description available & (reliability: 302.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551;PF04434;PF03108)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf20787_13751-19564' '(at5g45550 : 393.0) Mob1/phocein family protein; CONTAINS InterPro DOMAIN/s: Mob1/phocein (InterPro:IPR005301); BEST Arabidopsis thaliana protein match is: Mob1/phocein family protein (TAIR:AT4G19045.1); Has 1269 Blast hits to 1261 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 709; Fungi - 290; Plants - 115; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|35661 : 322.0) no description available & (gnl|cdd|86392 : 247.0) no description available & (reliability: 774.0) & (original description: Putative mats, Description = MOB kinase activator 1B, PFAM = PF03637)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf20828_20665-27363' '(at3g26935 : 536.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G41060.1); Has 5153 Blast hits to 5144 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 2200; Fungi - 770; Plants - 850; Viruses - 0; Other Eukaryotes - 1333 (source: NCBI BLink). & (gnl|cdd|36525 : 246.0) no description available & (gnl|cdd|34870 : 130.0) no description available & (reliability: 1072.0) & (original description: Putative PAT07, Description = Probable protein S-acyltransferase 7, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf21890_78185-85432' '(at2g30580 : 166.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 2 (DRIP2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 1 (TAIR:AT1G06770.1); Has 1631 Blast hits to 1626 proteins in 163 species: Archae - 0; Bacteria - 2; Metazoa - 1227; Fungi - 58; Plants - 232; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative PGSC0003DMG400004205, Description = BnaC04g13880D protein, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf23254_32912-38675' '(at4g24630 : 475.0) DHHC-type zinc finger family protein; FUNCTIONS IN: receptor activity, zinc ion binding; INVOLVED IN: multicellular organismal development; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Plexin-like fold (InterPro:IPR016201); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G50020.2); Has 5142 Blast hits to 5136 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 2201; Fungi - 738; Plants - 841; Viruses - 0; Other Eukaryotes - 1362 (source: NCBI BLink). & (gnl|cdd|36525 : 226.0) no description available & (gnl|cdd|34870 : 130.0) no description available & (reliability: 950.0) & (original description: Putative PAT08, Description = Protein S-acyltransferase 8, PFAM = PF01529)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf23876_74425-77941' '(at1g64830 : 344.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G33340.1); Has 3478 Blast hits to 3458 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 661; Fungi - 712; Plants - 1893; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36553 : 206.0) no description available & (gnl|cdd|84452 : 87.6) no description available & (reliability: 654.0) & (original description: Putative At2g35615, Description = Probable aspartic protease At2g35615, PFAM = PF14543;PF14541)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf27226_51215-55194' '(at4g31540 : 553.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein G1 (EXO70G1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, exocyst; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein G2 (TAIR:AT1G51640.1); Has 805 Blast hits to 799 proteins in 127 species: Archae - 0; Bacteria - 1; Metazoa - 136; Fungi - 99; Plants - 561; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|37555 : 304.0) no description available & (gnl|cdd|86233 : 301.0) no description available & (reliability: 1106.0) & (original description: Putative BnaA01g34780D, Description = BnaA01g34780D protein, PFAM = PF03081)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf27305_77328-93859' '(at5g63610 : 649.0) significant sequence similarity to plant and animal cyclin-dependent protein kinases, and was classified as an E-type CDK with a SPTAIRE cyclin binding motif in the kinase domain.; cyclin-dependent kinase E;1 (CDKE;1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G67580.2); Has 122304 Blast hits to 120929 proteins in 4501 species: Archae - 96; Bacteria - 13482; Metazoa - 46432; Fungi - 12531; Plants - 29277; Viruses - 477; Other Eukaryotes - 20009 (source: NCBI BLink). & (gnl|cdd|35885 : 488.0) no description available & (gnl|cdd|47550 : 250.0) no description available & (p29619|cdc22_orysa : 226.0) Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Oryza sativa (Rice) & (reliability: 1298.0) & (original description: Putative cdk8, Description = Cyclin-dependent kinase 8, PFAM = PF00069)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf29588_70608-77655' '(at5g45550 : 386.0) Mob1/phocein family protein; CONTAINS InterPro DOMAIN/s: Mob1/phocein (InterPro:IPR005301); BEST Arabidopsis thaliana protein match is: Mob1/phocein family protein (TAIR:AT4G19045.1); Has 1269 Blast hits to 1261 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 709; Fungi - 290; Plants - 115; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|35661 : 315.0) no description available & (gnl|cdd|86392 : 243.0) no description available & (reliability: 754.0) & (original description: Putative MOB1B, Description = MOB kinase activator 1B, PFAM = PF03637)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf30681_8711-10897' '(at2g03050 : 270.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 93 (EMB93); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cellular response to singlet oxygen, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G34620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66247 : 127.0) no description available & (gnl|cdd|36481 : 85.9) no description available & (reliability: 540.0) & (original description: Putative MTERF1, Description = Transcription termination factor MTEF1, chloroplastic, PFAM = PF02536;PF02536)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf31903_1-3859' '(at4g24015 : 125.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G10150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative RHA4A, Description = Probable E3 ubiquitin-protein ligase RHA4A, PFAM = PF13639)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf32603_23042-25494' '(at1g51200 : 150.0) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT2G36320.1). & (gnl|cdd|38383 : 145.0) no description available & (q9llx1|isap1_orysa : 104.0) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (reliability: 300.0) & (original description: Putative SAP8, Description = Zinc finger A20 and AN1 domain-containing stress-associated protein 8, PFAM = PF01428;PF01754)' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf33312_14771-27903' '(at5g16680 : 327.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT3G02890.1); Has 6870 Blast hits to 4822 proteins in 413 species: Archae - 8; Bacteria - 605; Metazoa - 3213; Fungi - 704; Plants - 729; Viruses - 19; Other Eukaryotes - 1592 (source: NCBI BLink). & (reliability: 654.0) & (original description: Putative BnaAnng12780D, Description = Tyrosine-protein kinase BAZ1B, PFAM = )' T '27.3.99' 'RNA.regulation of transcription.unclassified' 'niben101scf38001_2407-5249' '(at1g11650 : 219.0) RBP45B; FUNCTIONS IN: RNA binding; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A (TAIR:AT5G54900.1); Has 29660 Blast hits to 18296 proteins in 811 species: Archae - 14; Bacteria - 2273; Metazoa - 15265; Fungi - 3531; Plants - 5870; Viruses - 0; Other Eukaryotes - 2707 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative dbdA, Description = Nuclear acid binding protein, putative, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold209_141287-149419' '(at5g19960 : 153.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47687 : 84.5) no description available & (reliability: 306.0) & (original description: Putative TCM_037971, Description = RNA-binding family protein, putative, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold477_8649-12471' '(gnl|cdd|35753 : 104.0) no description available & (at5g59950 : 94.7) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G02530.2). & (reliability: 189.4) & (original description: Putative aly, Description = Nucleotide-binding, alpha-beta plait, PFAM = PF00076;PF13865)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold843_92001-96927' '(gnl|cdd|39859 : 350.0) no description available & (q27k34|pla2_orysa : 267.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (at3g26120 : 248.0) Similar to terminal ear1 in Zea mays. A member of mei2-like gene family; phylogenetic analysis revealed that TEL1 belongs to the third clade of mei2-like proteins (TEL clade), with conserved two N-terminal RNA recognition motifs (RRM), in addition to the C-terminal RRM, shared among all mei2-like proteins.; terminal EAR1-like 1 (TEL1); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: primary root apical meristem, cotyledon primordium, shoot apical meristem, floral meristem, embryonic shoot apical meristem; EXPRESSED DURING: D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: terminal EAR1-like 2 (TAIR:AT1G67770.1); Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67666 : 135.0) no description available & (reliability: 496.0) & (original description: Putative TEL2, Description = Terminal ear1-like 2 protein, PFAM = PF04059;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold955_12727-16731' '(at5g66010 : 162.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G20890.1). & (gnl|cdd|39412 : 108.0) no description available & (reliability: 324.0) & (original description: Putative At5g66010, Description = Heterogeneous nuclear ribonucleoprotein F, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold1613_81586-91207' '(at3g25470 : 380.0) bacterial hemolysin-related; FUNCTIONS IN: methyltransferase activity, RNA binding, nucleic acid binding; INVOLVED IN: methylation, hemolysis by symbiont of host erythrocytes; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding S4 (InterPro:IPR002942), Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877), Haemolysin A (InterPro:IPR004538); Has 3788 Blast hits to 3763 proteins in 1590 species: Archae - 10; Bacteria - 3068; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 663 (source: NCBI BLink). & (gnl|cdd|31382 : 265.0) no description available & (reliability: 760.0) & (original description: Putative tlyA, Description = 16S/23S rRNA (Cytidine-2'-O)-methyltransferase TlyA, PFAM = PF01479;PF01728)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold1756_76984-80927' '(at1g13190 : 195.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G55670.1); Has 32447 Blast hits to 17825 proteins in 1064 species: Archae - 7; Bacteria - 12227; Metazoa - 10368; Fungi - 2543; Plants - 3608; Viruses - 174; Other Eukaryotes - 3520 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative F3F19.21, Description = F3F19.21 protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold1963_1118-16296' '(at5g15270 : 235.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G14170.3); Has 5625 Blast hits to 2559 proteins in 215 species: Archae - 0; Bacteria - 48; Metazoa - 3662; Fungi - 737; Plants - 967; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37401 : 206.0) no description available & (reliability: 470.0) & (original description: Putative BnaC09g54720D, Description = BnaC09g54720D protein, PFAM = PF00013;PF00013;PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold2785_73314-78509' '(at3g15010 : 157.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: leaf senescence, cell death, ethylene biosynthetic process, defense response; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G41060.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39406 : 106.0) no description available & (p82277|rrp2_spiol : 88.2) Plastid-specific 30S ribosomal protein 2, chloroplast precursor (PSRP-2) - Spinacia oleracea (Spinach) & (reliability: 314.0) & (original description: Putative Os01g0614500, Description = Nucleotide-binding, alpha-beta plait, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold3476_58763-63989' '(at3g19090 : 204.0) RNA-binding protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: ribonucleoprotein complex, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: RNA-binding protein (TAIR:AT2G43970.1); Has 912 Blast hits to 912 proteins in 142 species: Archae - 0; Bacteria - 2; Metazoa - 538; Fungi - 65; Plants - 233; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|37066 : 190.0) no description available & (gnl|cdd|47984 : 86.8) no description available & (reliability: 408.0) & (original description: Putative FIP1, Description = La-related protein 7, PFAM = PF05383;PF07145)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold6759_38510-45402' '(at2g44710 : 486.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (gnl|cdd|35340 : 165.0) no description available & (reliability: 972.0) & (original description: Putative ws1, Description = Water-stress protein, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold7128_5267-23321' '(at1g09700 : 87.8) Encodes a nuclear dsRNA binding protein. Involved in mRNA cleavage. The mutant is characterized by shorter stature, delayed flowering, leaf hyponasty, reduced fertility, decreased rate of root growth, and an altered root gravitropic response. It also exhibits less sensitivity to auxin and cytokinin.; HYPONASTIC LEAVES 1 (HYL1); CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 2 (TAIR:AT2G28380.1); Has 992 Blast hits to 893 proteins in 320 species: Archae - 14; Bacteria - 506; Metazoa - 117; Fungi - 6; Plants - 270; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative Sb07g019380, Description = Putative uncharacterized protein Sb07g019380, PFAM = PF00035;PF00035)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold9236_19751-24275' '(at4g28990 : 98.2) RNA-binding protein-related; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); Has 1307 Blast hits to 1081 proteins in 160 species: Archae - 0; Bacteria - 36; Metazoa - 556; Fungi - 137; Plants - 464; Viruses - 16; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative BnaA01g07930D, Description = BnaA01g07930D protein, PFAM = )' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold9467_16468-21341' '(p19682|roc3_nicsy : 461.0) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (at4g24770 : 277.0) Encodes a chloroplast RNA-binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Required for editing and stability of specific chloroplast mRNAs.; 31-kDa RNA binding protein (RBP31); FUNCTIONS IN: RNA binding, poly(U) RNA binding; INVOLVED IN: RNA modification, RNA processing, innate immune response; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 31B (TAIR:AT5G50250.1); Has 997248 Blast hits to 498569 proteins in 22111 species: Archae - 21618; Bacteria - 606023; Metazoa - 186637; Fungi - 27654; Plants - 60055; Viruses - 71042; Other Eukaryotes - 24219 (source: NCBI BLink). & (gnl|cdd|35349 : 107.0) no description available & (gnl|cdd|47687 : 84.5) no description available & (reliability: 554.0) & (original description: Putative nbp1, Description = 28 kDa ribonucleoprotein, chloroplastic, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold10143_28025-31678' '(at3g56860 : 284.0) encodes a nuclear protein that binds to RNA with a specificity for oligouridylates in vitro. Along with UBP1 and UBA1a, it may act as a component of a complex recognizing U-rich sequences in plant 3'-UTRs and contributing to the stabilization of mRNAs in the nucleus.; UBP1-associated protein 2A (UBA2A); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G41060.2). & (gnl|cdd|39406 : 99.0) no description available & (reliability: 568.0) & (original description: Putative UBA2B, Description = UBP1-associated protein 2B, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold12342_31817-41991' '(at3g20890 : 238.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G66010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36579 : 216.0) no description available & (reliability: 476.0) & (original description: Putative HNRH1, Description = Heterogeneous nuclear ribonucleoprotein F, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold14818_1743-10312' '(at1g32790 : 301.0) RNA-binding protein, putative, similar to RNA-binding protein GB:CAB40027 GI:4539439 from (Arabidopsis thaliana).Member of a family of PAB2 binding domain proteins.; CTC-interacting domain 11 (CID11); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 12 (TAIR:AT4G10610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 602.0) & (original description: Putative c18, Description = Putative uncharacterized protein c18, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold14993_1587-6588' '(at1g14340 : 125.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: oxidoreductase activity, nucleotide binding, nucleic acid binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G01210.1); Has 332 Blast hits to 332 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 92; Plants - 229; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative Zm.3709, Description = Putative RNA recognition motif containing family protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold15109_50324-56975' '(at5g46840 : 305.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G13224.2); Has 3214 Blast hits to 3009 proteins in 274 species: Archae - 0; Bacteria - 38; Metazoa - 1562; Fungi - 589; Plants - 622; Viruses - 0; Other Eukaryotes - 403 (source: NCBI BLink). & (reliability: 610.0) & (original description: Putative At5g46840, Description = At5g46840, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold18559_8396-12106' '(at1g58470 : 204.0) encodes an RNA-binding protein; RNA-binding protein 1 (RBP1); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G55550.4); Has 25375 Blast hits to 16260 proteins in 820 species: Archae - 0; Bacteria - 1958; Metazoa - 13222; Fungi - 2417; Plants - 5451; Viruses - 0; Other Eukaryotes - 2327 (source: NCBI BLink). & (gnl|cdd|39406 : 177.0) no description available & (reliability: 408.0) & (original description: Putative RBP1, Description = RNA-binding protein 1, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold20378_1-9903' '(at2g43410 : 519.0) FPA is a gene that regulates flowering time in Arabidopsis via a pathway that is independent of daylength (the autonomous pathway). Mutations in FPA result in extremely delayed flowering. Double mutants with FCA have reduced fertility and single/double mutants have defects in siRNA mediated chromatin silencing.; FPA; CONTAINS InterPro DOMAIN/s: Spen paralogue and orthologue SPOC, C-terminal (InterPro:IPR012921), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT4G12640.1); Has 504799 Blast hits to 501692 proteins in 22138 species: Archae - 10949; Bacteria - 306025; Metazoa - 96089; Fungi - 13914; Plants - 29775; Viruses - 36050; Other Eukaryotes - 11997 (source: NCBI BLink). & (gnl|cdd|35367 : 82.8) no description available & (reliability: 1038.0) & (original description: Putative FPA1, Description = Flowering time control protein FPA, PFAM = PF07744;PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold20951_8630-17389' '(at4g03110 : 490.0) Encodes a putative RNA-binding protein that is located in the cytoplasm and is involved in the hypersensitive response and positively regulates salicylic acid-mediated immunity.; RNA-binding protein-defense related 1 (RBP-DR1); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: plant-type hypersensitive response, positive regulation of salicylic acid mediated signaling pathway; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Ribonucleoprotein, BRUNO-like (InterPro:IPR015903), Paraneoplastic encephalomyelitis antigen (InterPro:IPR002343), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G03457.1); Has 16162 Blast hits to 12321 proteins in 473 species: Archae - 8; Bacteria - 251; Metazoa - 10325; Fungi - 1647; Plants - 2258; Viruses - 0; Other Eukaryotes - 1673 (source: NCBI BLink). & (gnl|cdd|35366 : 395.0) no description available & (reliability: 980.0) & (original description: Putative BRN2, Description = RNA-binding protein BRN2, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold23420_20731-23700' '(at5g09880 : 138.0) Splicing factor, CC1-like; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Splicing factor, CC1-like (InterPro:IPR006509), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Splicing factor, CC1-like (TAIR:AT2G16940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35369 : 115.0) no description available & (reliability: 276.0) & (original description: Putative pco133413, Description = RNA-binding protein 39, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold25061_3679-11508' '(at5g56140 : 391.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36801 : 216.0) no description available & (gnl|cdd|29005 : 152.0) no description available & (reliability: 782.0) & (original description: Putative At5g56140, Description = KH domain-containing protein At5g56140, PFAM = PF16544)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold27151_15032-20163' '(at2g37340 : 181.0) encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks.; arginine/serine-rich zinc knuckle-containing protein 33 (RSZ33); FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT3G53500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative RS2Z32, Description = Serine/arginine-rich splicing factor RS2Z32, PFAM = PF00076;PF00098;PF00098)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold28852_1197-5397' '(at3g13224 : 241.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G40490.1); Has 77800 Blast hits to 37058 proteins in 1622 species: Archae - 33; Bacteria - 18580; Metazoa - 32661; Fungi - 6344; Plants - 11400; Viruses - 392; Other Eukaryotes - 8390 (source: NCBI BLink). & (gnl|cdd|39406 : 148.0) no description available & (reliability: 482.0) & (original description: Putative GTBP2, Description = G-strand specific single-stranded telomere-binding protein 2, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold29721_7978-11669' '(at3g07810 : 363.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G47620.2); Has 54120 Blast hits to 30425 proteins in 1467 species: Archae - 38; Bacteria - 13586; Metazoa - 19029; Fungi - 4969; Plants - 7799; Viruses - 151; Other Eukaryotes - 8548 (source: NCBI BLink). & (gnl|cdd|39406 : 208.0) no description available & (p19682|roc3_nicsy : 86.3) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|31068 : 80.5) no description available & (reliability: 726.0) & (original description: Putative RNP, Description = HnRNP, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold31302_1-7982' '(at5g15270 : 112.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G14170.3); Has 5625 Blast hits to 2559 proteins in 215 species: Archae - 0; Bacteria - 48; Metazoa - 3662; Fungi - 737; Plants - 967; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37401 : 106.0) no description available & (reliability: 224.0) & (original description: Putative PGSC0003DMG400025983, Description = RNA-binding KH domain-containing protein isoform 2, PFAM = PF00013;PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold32036_756-7370' '(at3g21215 : 329.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G42240.1); Has 5454 Blast hits to 2765 proteins in 341 species: Archae - 4; Bacteria - 269; Metazoa - 1333; Fungi - 651; Plants - 2326; Viruses - 357; Other Eukaryotes - 514 (source: NCBI BLink). & (gnl|cdd|36670 : 148.0) no description available & (reliability: 658.0) & (original description: Putative prp3, Description = Proline rich protein 3, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold33592_16268-20173' '(at4g35785 : 128.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: ribonucleoprotein complex, chloroplast; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G07350.1). & (gnl|cdd|47687 : 81.8) no description available & (reliability: 256.0) & (original description: Putative TRA2, Description = RNA-binding (RRM/RBD/RNP motifs) family protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold33748_9333-16435' '(gnl|cdd|38156 : 120.0) no description available & (at5g47210 : 89.0) Hyaluronan / mRNA binding family; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Stm1, N-terminal (InterPro:IPR019084), Hyaluronan/mRNA-binding protein (InterPro:IPR006861); BEST Arabidopsis thaliana protein match is: Hyaluronan / mRNA binding family (TAIR:AT4G17520.1); Has 17408 Blast hits to 9992 proteins in 935 species: Archae - 13; Bacteria - 5069; Metazoa - 5239; Fungi - 1478; Plants - 1692; Viruses - 242; Other Eukaryotes - 3675 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative rgga, Description = Hyaluronan/mRNA-binding protein, PFAM = PF04774;PF09598)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold33873_464-5267' '(gnl|cdd|39859 : 338.0) no description available & (q27k34|pla2_orysa : 265.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (at3g26120 : 246.0) Similar to terminal ear1 in Zea mays. A member of mei2-like gene family; phylogenetic analysis revealed that TEL1 belongs to the third clade of mei2-like proteins (TEL clade), with conserved two N-terminal RNA recognition motifs (RRM), in addition to the C-terminal RRM, shared among all mei2-like proteins.; terminal EAR1-like 1 (TEL1); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: primary root apical meristem, cotyledon primordium, shoot apical meristem, floral meristem, embryonic shoot apical meristem; EXPRESSED DURING: D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: terminal EAR1-like 2 (TAIR:AT1G67770.1); Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67666 : 135.0) no description available & (reliability: 492.0) & (original description: Putative TE1, Description = Protein terminal ear1, PFAM = PF00076;PF04059)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold34754_1-3892' '(at3g13224 : 247.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G40490.1); Has 77800 Blast hits to 37058 proteins in 1622 species: Archae - 33; Bacteria - 18580; Metazoa - 32661; Fungi - 6344; Plants - 11400; Viruses - 392; Other Eukaryotes - 8390 (source: NCBI BLink). & (gnl|cdd|39406 : 148.0) no description available & (p28644|roc1_spiol : 85.9) 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) & (reliability: 494.0) & (original description: Putative rbp, Description = RNA recognition motif containing protein, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold35090_8828-18238' '(at3g04610 : 414.0) flowering locus KH domain (FLK); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: positive regulation of flower development; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26000.1); Has 8156 Blast hits to 5360 proteins in 381 species: Archae - 0; Bacteria - 269; Metazoa - 3587; Fungi - 776; Plants - 1209; Viruses - 216; Other Eukaryotes - 2099 (source: NCBI BLink). & (gnl|cdd|37401 : 142.0) no description available & (reliability: 828.0) & (original description: Putative FLK, Description = Flowering locus K homology domain, PFAM = PF00013;PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold37967_6188-13228' '(at1g80930 : 813.0) MIF4G domain-containing protein / MA3 domain-containing protein; FUNCTIONS IN: RNA binding, binding; INVOLVED IN: translation, RNA metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: Initiation factor eIF-4 gamma, MA3 (TAIR:AT1G52325.1); Has 51676 Blast hits to 28577 proteins in 1484 species: Archae - 86; Bacteria - 5039; Metazoa - 22313; Fungi - 6500; Plants - 3817; Viruses - 357; Other Eukaryotes - 13564 (source: NCBI BLink). & (gnl|cdd|37351 : 752.0) no description available & (gnl|cdd|86149 : 108.0) no description available & (reliability: 1626.0) & (original description: Putative CWC22, Description = Cwc22 pre-mRNA splicing factor, PFAM = PF02847;PF02854)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold41293_3806-7536' '(at5g19030 : 99.4) RNA-binding (RRM/RBD/RNP motifs) family protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 198.8) & (original description: Putative PGSC0003DMG400030795, Description = BnaAnng22790D protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold44592_5166-10489' '(at5g59950 : 192.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G02530.2). & (gnl|cdd|35753 : 135.0) no description available & (reliability: 384.0) & (original description: Putative aly, Description = ALY protein, PFAM = PF13865;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold45242_10417-17064' '(at1g17640 : 218.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G13224.2); Has 513802 Blast hits to 488537 proteins in 21806 species: Archae - 10521; Bacteria - 302893; Metazoa - 102492; Fungi - 14718; Plants - 34458; Viruses - 34904; Other Eukaryotes - 13816 (source: NCBI BLink). & (gnl|cdd|39406 : 187.0) no description available & (p19682|roc3_nicsy : 94.0) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|31068 : 94.0) no description available & (reliability: 436.0) & (original description: Putative RNP, Description = Heterogeneous nuclear ribonucleoprotein 27C, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold52565_3019-13755' '(at4g21670 : 976.0) encodes a a novel transcriptional repressor harboring two double-stranded RNA-binding domains and a region homologous to the catalytic domain of RNA polymerase II C-terminal domain phosphatases found in yeast and in animals that regulate gene transcription. Protein exhibits innate phosphatase activity in vitro. Mutants exhibit hyperresponsiveness to ABA, cold, and NaCl.; C-terminal domain phosphatase-like 1 (CPL1); FUNCTIONS IN: double-stranded RNA binding, phosphatase activity, nucleotide phosphatase activity; INVOLVED IN: abscisic acid mediated signaling pathway, negative regulation of transcription, response to abiotic stimulus; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: carboxyl-terminal domain (ctd) phosphatase-like 2 (TAIR:AT5G01270.2); Has 330 Blast hits to 317 proteins in 105 species: Archae - 0; Bacteria - 31; Metazoa - 57; Fungi - 81; Plants - 112; Viruses - 1; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|35544 : 249.0) no description available & (reliability: 1952.0) & (original description: Putative CPL1, Description = RNA polymerase II C-terminal domain phosphatase-like 1, PFAM = PF03031;PF00035;PF00035)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold52607_9556-14240' '(at1g76460 : 196.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G20880.2); Has 4261 Blast hits to 4252 proteins in 371 species: Archae - 0; Bacteria - 0; Metazoa - 1989; Fungi - 541; Plants - 1112; Viruses - 30; Other Eukaryotes - 589 (source: NCBI BLink). & (gnl|cdd|35371 : 144.0) no description available & (reliability: 392.0) & (original description: Putative At1g20880, Description = RNA recognition motif-containing protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold54642_418-4882' '(at2g26695 : 161.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT3G15680.1); Has 972 Blast hits to 658 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 112; Plants - 381; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|39399 : 86.7) no description available & (reliability: 322.0) & (original description: Putative At2g26695, Description = At2g26695, PFAM = PF00641;PF00641)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold55134_614-6102' '(at4g17720 : 278.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: oxidoreductase activity, nucleotide binding, nucleic acid binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G46870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 556.0) & (original description: Putative BPA1, Description = Binding partner of ACD11 1, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold55950_1-7897' '(at1g75670 : 213.0) DNA-directed RNA polymerases; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rpb7, N-terminal (InterPro:IPR005576); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative At1g75670, Description = DNA-directed RNA polymerase, PFAM = )' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold56507_4533-8580' '(at5g55670 : 110.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G13190.1). & (reliability: 220.0) & (original description: Putative At5g55670, Description = RNA recognition motif-containing protein, PFAM = )' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold58196_1-12172' '(at1g55140 : 229.0) Ribonuclease III family protein; FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT3G13740.1); Has 289 Blast hits to 288 proteins in 138 species: Archae - 0; Bacteria - 238; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|32122 : 89.2) no description available & (reliability: 450.0) & (original description: Putative mrnC, Description = Mini-ribonuclease 3, PFAM = PF00636)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold58926_5189-8803' '(at1g09700 : 82.0) Encodes a nuclear dsRNA binding protein. Involved in mRNA cleavage. The mutant is characterized by shorter stature, delayed flowering, leaf hyponasty, reduced fertility, decreased rate of root growth, and an altered root gravitropic response. It also exhibits less sensitivity to auxin and cytokinin.; HYPONASTIC LEAVES 1 (HYL1); CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 2 (TAIR:AT2G28380.1); Has 992 Blast hits to 893 proteins in 320 species: Archae - 14; Bacteria - 506; Metazoa - 117; Fungi - 6; Plants - 270; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative DRB1501, Description = Double-stranded RNA binding protein, PFAM = PF00035;PF00035)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold61167_3528-10290' '(p19684|roc5_nicsy : 455.0) 33 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (at3g52380 : 276.0) chloroplast RNA-binding protein; chloroplast RNA-binding protein 33 (CP33); FUNCTIONS IN: RNA binding; LOCATED IN: thylakoid, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 31B (TAIR:AT5G50250.1); Has 514069 Blast hits to 499112 proteins in 22048 species: Archae - 10752; Bacteria - 302541; Metazoa - 101965; Fungi - 16255; Plants - 33338; Viruses - 35348; Other Eukaryotes - 13870 (source: NCBI BLink). & (gnl|cdd|35349 : 92.8) no description available & (gnl|cdd|47687 : 80.3) no description available & (reliability: 552.0) & (original description: Putative CP33, Description = 33 kDa ribonucleoprotein, chloroplastic, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold61978_2844-11363' '(at2g28380 : 322.0) Encodes a cytoplasmic dsRNA-binding protein.; dsRNA-binding protein 2 (DRB2); CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 5 (TAIR:AT5G41070.1); Has 1035 Blast hits to 903 proteins in 271 species: Archae - 2; Bacteria - 346; Metazoa - 166; Fungi - 72; Plants - 365; Viruses - 9; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 644.0) & (original description: Putative DBR4, Description = Double-stranded RNA-binding protein 2, PFAM = PF00035;PF00035)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold62355_1-11254' '(at5g02530 : 146.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G59950.1). & (gnl|cdd|35753 : 118.0) no description available & (reliability: 292.0) & (original description: Putative aly, Description = RNA and export factor-binding protein 2, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold62549_720-10032' '(at1g09230 : 316.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); Has 908 Blast hits to 898 proteins in 138 species: Archae - 0; Bacteria - 6; Metazoa - 655; Fungi - 76; Plants - 104; Viruses - 1; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 632.0) & (original description: Putative SNRNP65, Description = U11/U12 small nuclear ribonucleoprotein 65 kDa protein, PFAM = )' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold70505_160-8280' '(at3g04500 : 170.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition motif-related (InterPro:IPR015464); BEST Arabidopsis thaliana protein match is: oligouridylate binding protein 1B (TAIR:AT1G17370.1); Has 13292 Blast hits to 10995 proteins in 692 species: Archae - 0; Bacteria - 989; Metazoa - 6848; Fungi - 1697; Plants - 2705; Viruses - 0; Other Eukaryotes - 1053 (source: NCBI BLink). & (gnl|cdd|35447 : 137.0) no description available & (reliability: 340.0) & (original description: Putative acp2, Description = RNA-binding protein 42, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold71545_1-5481' '(at3g04500 : 208.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition motif-related (InterPro:IPR015464); BEST Arabidopsis thaliana protein match is: oligouridylate binding protein 1B (TAIR:AT1G17370.1); Has 13292 Blast hits to 10995 proteins in 692 species: Archae - 0; Bacteria - 989; Metazoa - 6848; Fungi - 1697; Plants - 2705; Viruses - 0; Other Eukaryotes - 1053 (source: NCBI BLink). & (gnl|cdd|35447 : 174.0) no description available & (reliability: 416.0) & (original description: Putative acp2, Description = RNA-binding protein 42, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold73345_1-6871' '(at4g11970 : 305.0) YTH family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 30 (TAIR:AT1G30460.1). & (gnl|cdd|37113 : 210.0) no description available & (gnl|cdd|67749 : 130.0) no description available & (reliability: 610.0) & (original description: Putative At4g11970, Description = YTH family protein, PFAM = PF04146)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold74935_3017-7422' '(at5g55550 : 224.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G26650.2). & (gnl|cdd|39406 : 189.0) no description available & (reliability: 448.0) & (original description: Putative MSI, Description = Putative heterogeneous nuclear ribonucleoprotein 1-like, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold75978_2927-5940' '(at3g56860 : 139.0) encodes a nuclear protein that binds to RNA with a specificity for oligouridylates in vitro. Along with UBP1 and UBA1a, it may act as a component of a complex recognizing U-rich sequences in plant 3'-UTRs and contributing to the stabilization of mRNAs in the nucleus.; UBP1-associated protein 2A (UBA2A); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G41060.2). & (gnl|cdd|35371 : 90.2) no description available & (reliability: 278.0) & (original description: Putative UBA1A, Description = Heterogeneous nuclear ribonucleoprotein D0, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold76700_1-5286' '(at5g61030 : 132.0) encodes a glycine-rich RNA binding protein. Gene expression is induced by cold.; glycine-rich RNA-binding protein 3 (GR-RBP3); FUNCTIONS IN: RNA binding, copper ion binding, ATP binding; INVOLVED IN: response to cold; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 5 (TAIR:AT1G74230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47687 : 84.9) no description available & (p49310|grp1_sinal : 81.3) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 264.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein 2, mitochondrial, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold78383_775-7489' '(at5g46250 : 250.0) RNA-binding protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: ribonucleoprotein complex, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein (TAIR:AT2G43970.1); Has 1643 Blast hits to 1641 proteins in 213 species: Archae - 0; Bacteria - 0; Metazoa - 943; Fungi - 256; Plants - 299; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink). & (gnl|cdd|37066 : 227.0) no description available & (gnl|cdd|47984 : 117.0) no description available & (reliability: 500.0) & (original description: Putative LARP6A, Description = La-related protein 6A, PFAM = PF00076;PF05383)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold96043_532-3460' '(p49310|grp1_sinal : 133.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 132.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 88.6) no description available & (gnl|cdd|35331 : 86.0) no description available & (reliability: 264.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.3scaffold126044_1-1841' '(at3g10400 : 176.0) RNA recognition motif and CCHC-type zinc finger domains containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Ribonucleoprotein, BRUNO-like (InterPro:IPR015903), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: ortholog of human splicing factor SC35 (TAIR:AT5G64200.2); Has 867 Blast hits to 867 proteins in 310 species: Archae - 0; Bacteria - 0; Metazoa - 452; Fungi - 160; Plants - 158; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative SNRNP31, Description = U11/U12 small nuclear ribonucleoprotein 31 kDa protein, PFAM = PF00098;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold27_966501-982696' '(at1g09230 : 409.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); Has 908 Blast hits to 898 proteins in 138 species: Archae - 0; Bacteria - 6; Metazoa - 655; Fungi - 76; Plants - 104; Viruses - 1; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 818.0) & (original description: Putative SNRNP65, Description = U11/U12 small nuclear ribonucleoprotein 65 kDa protein, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold60_317958-326228' '(at4g28990 : 117.0) RNA-binding protein-related; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); Has 1307 Blast hits to 1081 proteins in 160 species: Archae - 0; Bacteria - 36; Metazoa - 556; Fungi - 137; Plants - 464; Viruses - 16; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative BnaA01g07930D, Description = BnaA01g07930D protein, PFAM = )' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold70_1033849-1363366' '(at1g29400 : 573.0) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices.; MEI2-like protein 5 (ML5); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like 3 (TAIR:AT4G18120.2); Has 6281 Blast hits to 5530 proteins in 358 species: Archae - 4; Bacteria - 106; Metazoa - 3185; Fungi - 1006; Plants - 1245; Viruses - 0; Other Eukaryotes - 735 (source: NCBI BLink). & (gnl|cdd|39859 : 281.0) no description available & (gnl|cdd|67666 : 190.0) no description available & (q27k34|pla2_orysa : 122.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (reliability: 1146.0) & (original description: Putative AML1, Description = MEI2-like protein 5, PFAM = PF04059;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold231_204518-208340' '(gnl|cdd|35753 : 131.0) no description available & (at5g02530 : 125.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G59950.1). & (reliability: 250.0) & (original description: Putative aly, Description = RNA and export factor binding protein, putative, PFAM = PF13865;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold284_816407-827516' '(at1g17370 : 571.0) oligouridylate binding protein 1B (UBP1B); FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G14100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35370 : 193.0) no description available & (gnl|cdd|31068 : 88.6) no description available & (reliability: 1132.0) & (original description: Putative UBP1B, Description = Oligouridylate-binding protein 1B, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold448_2475-9059' '(at4g16830 : 149.0) Hyaluronan / mRNA binding family; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hyaluronan/mRNA-binding protein (InterPro:IPR006861); BEST Arabidopsis thaliana protein match is: Hyaluronan / mRNA binding family (TAIR:AT4G17520.1); Has 21958 Blast hits to 10880 proteins in 1019 species: Archae - 12; Bacteria - 7276; Metazoa - 6848; Fungi - 1552; Plants - 2999; Viruses - 314; Other Eukaryotes - 2957 (source: NCBI BLink). & (gnl|cdd|38156 : 132.0) no description available & (reliability: 298.0) & (original description: Putative rgga, Description = Nuclear RNA binding protein, PFAM = PF04774;PF09598)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold453_36733-43820' '(at3g15010 : 157.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: leaf senescence, cell death, ethylene biosynthetic process, defense response; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G41060.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39406 : 102.0) no description available & (p82277|rrp2_spiol : 87.4) Plastid-specific 30S ribosomal protein 2, chloroplast precursor (PSRP-2) - Spinacia oleracea (Spinach) & (reliability: 314.0) & (original description: Putative TCM_024877, Description = RNA-binding family protein isoform 1, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold589_331407-339608' '(at3g14450 : 327.0) RNA-binding protein, putative, contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (2 copies). Contains PAM PABC binding domain.; CTC-interacting domain 9 (CID9); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 8 (TAIR:AT1G53650.2); Has 3508 Blast hits to 2820 proteins in 274 species: Archae - 0; Bacteria - 0; Metazoa - 1915; Fungi - 426; Plants - 863; Viruses - 0; Other Eukaryotes - 304 (source: NCBI BLink). & (reliability: 654.0) & (original description: Putative c18, Description = Putative uncharacterized protein c18, PFAM = PF00076;PF00076;PF07145)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold617_550151-552872' '(p49310|grp1_sinal : 133.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 129.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 93.2) no description available & (gnl|cdd|35331 : 87.9) no description available & (reliability: 258.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold617_550169-573595' '(p49310|grp1_sinal : 133.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 132.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 94.3) no description available & (gnl|cdd|35331 : 86.7) no description available & (reliability: 264.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold625_135687-150799' '(gnl|cdd|35340 : 116.0) no description available & (at4g00830 : 90.1) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G52660.2). & (reliability: 180.2) & (original description: Putative pco093723, Description = Heterogeneous nuclear ribonucleoprotein A1, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold625_141857-150877' '(gnl|cdd|35340 : 118.0) no description available & (at4g00830 : 93.6) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G52660.2). & (reliability: 187.2) & (original description: Putative pco093723, Description = Putative RNA-binding protein 46-like, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold745_387166-407678' '(at5g09880 : 431.0) Splicing factor, CC1-like; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Splicing factor, CC1-like (InterPro:IPR006509), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Splicing factor, CC1-like (TAIR:AT2G16940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35369 : 378.0) no description available & (reliability: 862.0) & (original description: Putative RBM39, Description = RBM39, PFAM = PF00076;PF00076;PF15519)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold823_403262-415994' '(at2g44710 : 174.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (gnl|cdd|35340 : 172.0) no description available & (reliability: 348.0) & (original description: Putative Os07g0180800, Description = Putative nucleolin 2-like, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold889_405453-411742' '(gnl|cdd|38156 : 139.0) no description available & (at4g17520 : 112.0) Hyaluronan / mRNA binding family; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Stm1, N-terminal (InterPro:IPR019084), Hyaluronan/mRNA-binding protein (InterPro:IPR006861); BEST Arabidopsis thaliana protein match is: Hyaluronan / mRNA binding family (TAIR:AT5G47210.1); Has 14577 Blast hits to 9436 proteins in 968 species: Archae - 15; Bacteria - 3155; Metazoa - 5443; Fungi - 1433; Plants - 1957; Viruses - 142; Other Eukaryotes - 2432 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative RggA, Description = Nuclear RNA binding protein A, PFAM = PF09598;PF04774)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold1213_419632-428461' '(at2g25970 : 247.0) KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein (TAIR:AT1G33680.1); Has 68611 Blast hits to 35814 proteins in 1587 species: Archae - 63; Bacteria - 12513; Metazoa - 31065; Fungi - 9811; Plants - 6751; Viruses - 351; Other Eukaryotes - 8057 (source: NCBI BLink). & (gnl|cdd|36889 : 157.0) no description available & (reliability: 494.0) & (original description: Putative At2g25970, Description = F17H15.1/F17H15.1, PFAM = PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold1257_450118-467887' '(at2g21440 : 662.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 28 (TAIR:AT5G18810.1); Has 993074 Blast hits to 495169 proteins in 22089 species: Archae - 21796; Bacteria - 609929; Metazoa - 180707; Fungi - 26716; Plants - 57391; Viruses - 71662; Other Eukaryotes - 24873 (source: NCBI BLink). & (gnl|cdd|35349 : 324.0) no description available & (reliability: 1324.0) & (original description: Putative rbm28, Description = RNA-binding protein 28, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold1288_399483-421191' '(at5g15270 : 242.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G14170.3); Has 5625 Blast hits to 2559 proteins in 215 species: Archae - 0; Bacteria - 48; Metazoa - 3662; Fungi - 737; Plants - 967; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37401 : 205.0) no description available & (reliability: 484.0) & (original description: Putative PCBP, Description = RNA-binding KH domain-containing protein isoform 1, PFAM = PF00013;PF00013;PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold1427_417662-422465' '(gnl|cdd|39859 : 339.0) no description available & (q27k34|pla2_orysa : 265.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (at3g26120 : 246.0) Similar to terminal ear1 in Zea mays. A member of mei2-like gene family; phylogenetic analysis revealed that TEL1 belongs to the third clade of mei2-like proteins (TEL clade), with conserved two N-terminal RNA recognition motifs (RRM), in addition to the C-terminal RRM, shared among all mei2-like proteins.; terminal EAR1-like 1 (TEL1); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: primary root apical meristem, cotyledon primordium, shoot apical meristem, floral meristem, embryonic shoot apical meristem; EXPRESSED DURING: D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: terminal EAR1-like 2 (TAIR:AT1G67770.1); Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67666 : 135.0) no description available & (reliability: 492.0) & (original description: Putative TE1, Description = Protein terminal ear1, PFAM = PF00076;PF04059)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold1653_122435-127461' '(at3g21100 : 225.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G51520.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 450.0) & (original description: Putative At3g21100, Description = Putative uncharacterized protein At3g21100, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold2186_228963-360042' '(at3g04500 : 236.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition motif-related (InterPro:IPR015464); BEST Arabidopsis thaliana protein match is: oligouridylate binding protein 1B (TAIR:AT1G17370.1); Has 13292 Blast hits to 10995 proteins in 692 species: Archae - 0; Bacteria - 989; Metazoa - 6848; Fungi - 1697; Plants - 2705; Viruses - 0; Other Eukaryotes - 1053 (source: NCBI BLink). & (gnl|cdd|35447 : 201.0) no description available & (reliability: 472.0) & (original description: Putative v1g108798, Description = Predicted protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold2221_202682-214853' '(at5g16260 : 453.0) Encodes a RNA binding protein ELF9 (EARLY FLOWERING9). Loss of ELF9 function in the Wassilewskija ecotype causes early flowering in short days. ELF9 reduces SOC1 (SUPPRESSOR OF OVEREXPRESSION OF CO1) transcript levels, possibly via nonsense-mediated mRNA decay.; EARLY FLOWERING 9 (ELF9); FUNCTIONS IN: mRNA binding, RNA binding; INVOLVED IN: negative regulation of flower development, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), GYF (InterPro:IPR003169); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36761 : 281.0) no description available & (reliability: 906.0) & (original description: Putative Sb05g002130, Description = Putative uncharacterized protein Sb05g002130, PFAM = PF14237;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold2238_337613-346810' '(at3g52660 : 405.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35340 : 335.0) no description available & (reliability: 810.0) & (original description: Putative At3g52660, Description = Heterogeneous nuclear ribonucleoprotein Q, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold2738_148885-160677' '(at2g28380 : 280.0) Encodes a cytoplasmic dsRNA-binding protein.; dsRNA-binding protein 2 (DRB2); CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 5 (TAIR:AT5G41070.1); Has 1035 Blast hits to 903 proteins in 271 species: Archae - 2; Bacteria - 346; Metazoa - 166; Fungi - 72; Plants - 365; Viruses - 9; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative DRB1501, Description = Double-stranded RNA binding protein, PFAM = PF00035;PF00035)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold2809_24299-27071' '(p49310|grp1_sinal : 136.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 130.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 90.5) no description available & (gnl|cdd|35331 : 86.3) no description available & (reliability: 260.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold2897_26628-35684' '(at5g04430 : 297.0) Gene model AT5G04430.1 produces active protein. (BTS1S). Binds to ToMV genomic RNA and prevents viral multiplication.; binding to TOMV RNA 1L (long form) (BTR1L); CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 5613 Blast hits to 2614 proteins in 213 species: Archae - 0; Bacteria - 8; Metazoa - 3980; Fungi - 530; Plants - 787; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|37402 : 229.0) no description available & (reliability: 594.0) & (original description: Putative BTR1, Description = Binding to TOMV RNA 1L (Long form) protein, PFAM = PF00013;PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold3158_230876-241898' '(at5g01270 : 823.0) Encodes CPL2, a carboxyl-terminal domain (CTD) phosphatase that dephosphorylates CTD Ser5-PO4 of the RNA polymerase II complex. Regulates plant growth, stress and auxin responses.; carboxyl-terminal domain (ctd) phosphatase-like 2 (CPL2); FUNCTIONS IN: double-stranded RNA binding, phosphatase activity; INVOLVED IN: response to auxin stimulus, response to osmotic stress, developmental growth; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: C-terminal domain phosphatase-like 1 (TAIR:AT4G21670.1). & (gnl|cdd|35544 : 265.0) no description available & (reliability: 1646.0) & (original description: Putative CPL2, Description = RNA polymerase II C-terminal domain phosphatase-like 2, PFAM = PF03031;PF00035)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold3311_200933-207147' '(at1g29400 : 684.0) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices.; MEI2-like protein 5 (ML5); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like 3 (TAIR:AT4G18120.2); Has 6281 Blast hits to 5530 proteins in 358 species: Archae - 4; Bacteria - 106; Metazoa - 3185; Fungi - 1006; Plants - 1245; Viruses - 0; Other Eukaryotes - 735 (source: NCBI BLink). & (gnl|cdd|39859 : 351.0) no description available & (gnl|cdd|67666 : 191.0) no description available & (q27k34|pla2_orysa : 124.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (reliability: 1368.0) & (original description: Putative ML2, Description = Protein MEI2-like 2, PFAM = PF04059;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold3534_155243-158799' '(at3g13180 : 148.0) NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678), NusB/RsmB/TIM44 (InterPro:IPR006027); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G55920.1); Has 10280 Blast hits to 10234 proteins in 2431 species: Archae - 377; Bacteria - 6832; Metazoa - 588; Fungi - 364; Plants - 311; Viruses - 0; Other Eukaryotes - 1808 (source: NCBI BLink). & (gnl|cdd|36338 : 96.2) no description available & (gnl|cdd|30493 : 83.9) no description available & (reliability: 296.0) & (original description: Putative BnaA01g29950D, Description = Ribosomal RNA small subunit methyltransferase B, PFAM = PF01189)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold3708_6924-18661' '(at3g54230 : 662.0) Encodes a splicing factor SUA (suppressor of abi3-5), homologous to the human protein RBM5. Controls alternative splicing of the developmental regulator ABI3.; suppressor of abi3-5 (SUA); FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), D111/G-patch (InterPro:IPR000467), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: ortholog of human splicing factor SC35 (TAIR:AT5G64200.2). & (reliability: 1324.0) & (original description: Putative SUA, Description = SUPPRESSOR OF ABI3-5, PFAM = PF01585;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold4272_199295-202132' '(at2g26695 : 151.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT3G15680.1); Has 972 Blast hits to 658 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 112; Plants - 381; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|39399 : 82.5) no description available & (reliability: 302.0) & (original description: Putative At2g26695, Description = At2g26695, PFAM = PF00641;PF00641)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold4559_32647-141893' '(at5g04430 : 105.0) Gene model AT5G04430.1 produces active protein. (BTS1S). Binds to ToMV genomic RNA and prevents viral multiplication.; binding to TOMV RNA 1L (long form) (BTR1L); CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 5613 Blast hits to 2614 proteins in 213 species: Archae - 0; Bacteria - 8; Metazoa - 3980; Fungi - 530; Plants - 787; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|37402 : 92.4) no description available & (reliability: 210.0) & (original description: Putative BTR1, Description = Binding to TOMV RNA 1L (Long form) protein, PFAM = PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold4851_236392-240437' '(at5g55670 : 152.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G13190.1). & (gnl|cdd|40046 : 86.3) no description available & (reliability: 304.0) & (original description: Putative At5g55670, Description = RNA recognition motif-containing protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold5066_76398-82843' '(gnl|cdd|38156 : 139.0) no description available & (at4g17520 : 134.0) Hyaluronan / mRNA binding family; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Stm1, N-terminal (InterPro:IPR019084), Hyaluronan/mRNA-binding protein (InterPro:IPR006861); BEST Arabidopsis thaliana protein match is: Hyaluronan / mRNA binding family (TAIR:AT5G47210.1); Has 14577 Blast hits to 9436 proteins in 968 species: Archae - 15; Bacteria - 3155; Metazoa - 5443; Fungi - 1433; Plants - 1957; Viruses - 142; Other Eukaryotes - 2432 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative rgga, Description = Hyaluronan/mRNA-binding protein, PFAM = PF04774;PF09598)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold5411_119578-126901' '(at2g44710 : 276.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (gnl|cdd|35340 : 172.0) no description available & (gnl|cdd|34868 : 81.7) no description available & (reliability: 552.0) & (original description: Putative ws1, Description = Heterogeneous nuclear ribonucleoprotein Q, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold5499_30141-41161' '(at1g17370 : 538.0) oligouridylate binding protein 1B (UBP1B); FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G14100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35370 : 197.0) no description available & (gnl|cdd|31068 : 82.8) no description available & (reliability: 1076.0) & (original description: Putative UBP1, Description = Oligouridylate-binding protein 1, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold5643_15924-19398' '(gnl|cdd|37351 : 193.0) no description available & (at1g80930 : 190.0) MIF4G domain-containing protein / MA3 domain-containing protein; FUNCTIONS IN: RNA binding, binding; INVOLVED IN: translation, RNA metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: Initiation factor eIF-4 gamma, MA3 (TAIR:AT1G52325.1); Has 51676 Blast hits to 28577 proteins in 1484 species: Archae - 86; Bacteria - 5039; Metazoa - 22313; Fungi - 6500; Plants - 3817; Viruses - 357; Other Eukaryotes - 13564 (source: NCBI BLink). & (reliability: 380.0) & (original description: Putative cwc22, Description = Pre-mRNA-splicing factor cwc22, PFAM = )' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold5650_123793-129138' '(at5g61030 : 116.0) encodes a glycine-rich RNA binding protein. Gene expression is induced by cold.; glycine-rich RNA-binding protein 3 (GR-RBP3); FUNCTIONS IN: RNA binding, copper ion binding, ATP binding; INVOLVED IN: response to cold; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 5 (TAIR:AT1G74230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative GRP, Description = RNA-binding (RRM/RBD/RNP motif) family protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold6691_32427-51686' '(at5g25060 : 1007.0) RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA processing; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II, large subunit, CTD (InterPro:IPR006569), mRNA splicing factor, Cwf21 (InterPro:IPR013170), ENTH/VHS (InterPro:IPR008942), SWAP/Surp (InterPro:IPR000061), DNA-binding SAP (InterPro:IPR003034), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT5G10800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35373 : 737.0) no description available & (reliability: 2014.0) & (original description: Putative RRC1, Description = Protein RRC1, PFAM = PF00076;PF01805;PF08312)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold6787_32779-36085' '(at5g19030 : 80.5) RNA-binding (RRM/RBD/RNP motifs) family protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative PGSC0003DMG400030795, Description = At5g19030, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold7546_28488-33695' '(at1g21320 : 132.0) nucleotide binding;nucleic acid binding; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G76940.1); Has 568 Blast hits to 568 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 270; Fungi - 126; Plants - 140; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative BnaA07g37330D, Description = BnaA07g37330D protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold7768_48224-55428' '(at2g44710 : 273.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (gnl|cdd|35340 : 167.0) no description available & (gnl|cdd|34868 : 89.0) no description available & (reliability: 546.0) & (original description: Putative ws1, Description = Heterogeneous nuclear ribonucleoprotein Q, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold7926_39072-42376' '(at3g26420 : 110.0) Zinc finger-containing glycine-rich RNA-binding protein. Cold-inducible. Contributes to the enhancement of freezing tolerance.; ATRZ-1A; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT5G04280.1); Has 19846 Blast hits to 11644 proteins in 926 species: Archae - 13; Bacteria - 5482; Metazoa - 6891; Fungi - 1262; Plants - 3241; Viruses - 222; Other Eukaryotes - 2735 (source: NCBI BLink). & (p49311|grp2_sinal : 83.6) Glycine-rich RNA-binding protein GRP2A - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 220.0) & (original description: Putative CCR1, Description = Glycine-rich RNA-binding protein, PFAM = PF00098;PF00076)' T '27.4' 'RNA.RNA binding' 'nbv0.5scaffold9192_3328-11032' '(at2g17975 : 267.0) zinc finger (Ran-binding) family protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT2G26695.1); Has 1281 Blast hits to 744 proteins in 145 species: Archae - 0; Bacteria - 0; Metazoa - 342; Fungi - 88; Plants - 606; Viruses - 0; Other Eukaryotes - 245 (source: NCBI BLink). & (gnl|cdd|39399 : 104.0) no description available & (reliability: 534.0) & (original description: Putative Sb06g000870, Description = Putative uncharacterized protein Sb06g000870, PFAM = PF00641;PF00641;PF00641)' T '27.4' 'RNA.RNA binding' 'niben044scf00000391ctg017_92931-97982' '(gnl|cdd|39859 : 346.0) no description available & (q27k34|pla2_orysa : 270.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (at3g26120 : 249.0) Similar to terminal ear1 in Zea mays. A member of mei2-like gene family; phylogenetic analysis revealed that TEL1 belongs to the third clade of mei2-like proteins (TEL clade), with conserved two N-terminal RNA recognition motifs (RRM), in addition to the C-terminal RRM, shared among all mei2-like proteins.; terminal EAR1-like 1 (TEL1); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: primary root apical meristem, cotyledon primordium, shoot apical meristem, floral meristem, embryonic shoot apical meristem; EXPRESSED DURING: D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: terminal EAR1-like 2 (TAIR:AT1G67770.1); Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67666 : 136.0) no description available & (reliability: 498.0) & (original description: Putative TEL2, Description = Terminal ear1-like 2 protein, PFAM = PF04059;PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00002011ctg011_10775-14744' '(at4g10110 : 152.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G18510.1); Has 3478 Blast hits to 3175 proteins in 382 species: Archae - 0; Bacteria - 389; Metazoa - 1438; Fungi - 566; Plants - 665; Viruses - 0; Other Eukaryotes - 420 (source: NCBI BLink). & (gnl|cdd|35353 : 106.0) no description available & (reliability: 304.0) & (original description: Putative Os01g0876500, Description = Os01g0876500 protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00002447ctg009_1850-5530' '(at5g61030 : 121.0) encodes a glycine-rich RNA binding protein. Gene expression is induced by cold.; glycine-rich RNA-binding protein 3 (GR-RBP3); FUNCTIONS IN: RNA binding, copper ion binding, ATP binding; INVOLVED IN: response to cold; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 5 (TAIR:AT1G74230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47687 : 84.9) no description available & (p19683|roc4_nicsy : 81.3) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 242.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein 2, mitochondrial, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00002658ctg002_2536-5118' '(p49310|grp1_sinal : 133.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 129.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 94.7) no description available & (gnl|cdd|35331 : 88.7) no description available & (reliability: 258.0) & (original description: Putative CCR1, Description = Glycine-rich RNA-binding protein 8, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00002863ctg017_5594-8976' '(at2g26695 : 151.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT3G15680.1); Has 972 Blast hits to 658 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 112; Plants - 381; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|39399 : 82.1) no description available & (reliability: 302.0) & (original description: Putative Os06g0141200, Description = Os06g0141200 protein, PFAM = PF00641;PF00641;PF00641)' T '27.4' 'RNA.RNA binding' 'niben044scf00003057ctg019_191-5032' '(at2g26695 : 159.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT3G15680.1); Has 972 Blast hits to 658 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 112; Plants - 381; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|39399 : 88.3) no description available & (reliability: 318.0) & (original description: Putative umc1283, Description = Zinc finger (Ran-binding) family protein, PFAM = PF00641;PF00641)' T '27.4' 'RNA.RNA binding' 'niben044scf00003057ctg021_1916-3929' '(at2g26695 : 153.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT3G15680.1); Has 972 Blast hits to 658 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 112; Plants - 381; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|39399 : 86.3) no description available & (reliability: 306.0) & (original description: Putative Sb03g024900, Description = Putative uncharacterized protein Sb03g024900, PFAM = PF00641;PF00641)' T '27.4' 'RNA.RNA binding' 'niben044scf00003563ctg002_1791-6018' '(at4g09040 : 183.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G35410.1); Has 1165 Blast hits to 1048 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 539; Fungi - 16; Plants - 571; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|35333 : 84.7) no description available & (q08935|roc1_nicsy : 80.9) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (reliability: 366.0) & (original description: Putative At4g09040, Description = At4g09040, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00003895ctg002_2273-9556' '(gnl|cdd|35371 : 149.0) no description available & (at1g78260 : 140.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G22330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47687 : 82.6) no description available & (reliability: 280.0) & (original description: Putative PGSC0003DMG400030803, Description = RNA-binding protein 38, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00003996ctg002_23425-31319' '(at1g60650 : 153.0) RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT5G04280.1); Has 996832 Blast hits to 989721 proteins in 35749 species: Archae - 21265; Bacteria - 589617; Metazoa - 208621; Fungi - 26263; Plants - 58603; Viruses - 68007; Other Eukaryotes - 24456 (source: NCBI BLink). & (p10979|grpa_maize : 95.9) Glycine-rich RNA-binding, abscisic acid-inducible protein - Zea mays (Maize) & (gnl|cdd|47687 : 86.8) no description available & (reliability: 306.0) & (original description: Putative RZ1B, Description = Glycine-rich RNA-binding protein RZ1B, PFAM = PF00098;PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00004226ctg006_1294-6191' '(at5g59950 : 110.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G02530.2). & (gnl|cdd|35753 : 93.9) no description available & (reliability: 220.0) & (original description: Putative aly, Description = RNA and export factor-binding protein 2, PFAM = PF00076;PF13865)' T '27.4' 'RNA.RNA binding' 'niben044scf00004333ctg026_944-7413' '(at1g22910 : 178.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G33470.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35371 : 158.0) no description available & (reliability: 356.0) & (original description: Putative Sb03g041530, Description = Putative uncharacterized protein Sb03g041530, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00004629ctg001_10175-16839' '(at2g44710 : 277.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (gnl|cdd|35340 : 168.0) no description available & (gnl|cdd|34868 : 82.8) no description available & (reliability: 554.0) & (original description: Putative ws1, Description = Heterogeneous nuclear ribonucleoprotein Q, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00004960ctg001_3352-8706' '(at5g15270 : 525.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G14170.3); Has 5625 Blast hits to 2559 proteins in 215 species: Archae - 0; Bacteria - 48; Metazoa - 3662; Fungi - 737; Plants - 967; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37401 : 295.0) no description available & (reliability: 1050.0) & (original description: Putative nabp, Description = KH domain-containing protein, PFAM = PF00013;PF00013;PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'niben044scf00005034ctg002_4700-10497' '(at1g09700 : 203.0) Encodes a nuclear dsRNA binding protein. Involved in mRNA cleavage. The mutant is characterized by shorter stature, delayed flowering, leaf hyponasty, reduced fertility, decreased rate of root growth, and an altered root gravitropic response. It also exhibits less sensitivity to auxin and cytokinin.; HYPONASTIC LEAVES 1 (HYL1); CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 2 (TAIR:AT2G28380.1); Has 992 Blast hits to 893 proteins in 320 species: Archae - 14; Bacteria - 506; Metazoa - 117; Fungi - 6; Plants - 270; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (reliability: 406.0) & (original description: Putative DRB1501, Description = Double-stranded RNA binding protein, PFAM = PF00035;PF00035)' T '27.4' 'RNA.RNA binding' 'niben044scf00005580ctg002_14020-19424' '(at3g51950 : 230.0) Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G63450.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative Os03g0328900, Description = Zinc finger CCCH domain-containing protein 22, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00005890ctg008_2354-6176' '(gnl|cdd|35753 : 139.0) no description available & (at5g02530 : 126.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G59950.1). & (reliability: 252.0) & (original description: Putative aly, Description = RNA and export factor binding protein, putative, PFAM = PF13865;PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00006067ctg013_3737-11081' '(at3g55340 : 243.0) Plant-specific protein. Interacts with phragmoplastin, Rop1 and Rop2. Involved in cell plate formation.; phragmoplastin interacting protein 1 (PHIP1); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G35410.1); Has 17490 Blast hits to 13137 proteins in 598 species: Archae - 10; Bacteria - 621; Metazoa - 8175; Fungi - 2466; Plants - 2451; Viruses - 16; Other Eukaryotes - 3751 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative NCL, Description = BnaA09g34920D protein, PFAM = PF00076;PF00076;PF00098)' T '27.4' 'RNA.RNA binding' 'niben044scf00006142ctg030_1-7505' '(at5g15270 : 487.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G14170.3); Has 5625 Blast hits to 2559 proteins in 215 species: Archae - 0; Bacteria - 48; Metazoa - 3662; Fungi - 737; Plants - 967; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37401 : 292.0) no description available & (reliability: 974.0) & (original description: Putative nabp, Description = KH domain-containing protein, PFAM = PF00013;PF00013;PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'niben044scf00007081ctg010_1-6490' '(at4g10610 : 196.0) RNA-binding protein, putative. Member of a family of proteins having an PABC binding domain (PAM motif).; RNA-BINDING PROTEIN 37 (RBP37); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 11 (TAIR:AT1G32790.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative c18, Description = Ataxin-2, C-terminal, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00007742ctg002_4752-10844' '(at5g37720 : 178.0) ALWAYS EARLY 4 (ALY4); FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G66260.2); Has 5809 Blast hits to 5449 proteins in 440 species: Archae - 2; Bacteria - 280; Metazoa - 2763; Fungi - 1142; Plants - 1077; Viruses - 9; Other Eukaryotes - 536 (source: NCBI BLink). & (gnl|cdd|35753 : 128.0) no description available & (reliability: 356.0) & (original description: Putative aly, Description = ALY protein, PFAM = PF00076;PF13865)' T '27.4' 'RNA.RNA binding' 'niben044scf00008452ctg009_1-11398' '(at5g04430 : 329.0) Gene model AT5G04430.1 produces active protein. (BTS1S). Binds to ToMV genomic RNA and prevents viral multiplication.; binding to TOMV RNA 1L (long form) (BTR1L); CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 5613 Blast hits to 2614 proteins in 213 species: Archae - 0; Bacteria - 8; Metazoa - 3980; Fungi - 530; Plants - 787; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|37402 : 241.0) no description available & (reliability: 658.0) & (original description: Putative BTR1, Description = Protein BTR1, PFAM = PF00013;PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'niben044scf00008631ctg002_4753-13207' '(at2g25970 : 228.0) KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein (TAIR:AT1G33680.1); Has 68611 Blast hits to 35814 proteins in 1587 species: Archae - 63; Bacteria - 12513; Metazoa - 31065; Fungi - 9811; Plants - 6751; Viruses - 351; Other Eukaryotes - 8057 (source: NCBI BLink). & (gnl|cdd|36889 : 155.0) no description available & (reliability: 456.0) & (original description: Putative At2g25970, Description = F17H15.1/F17H15.1, PFAM = PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'niben044scf00009083ctg008_667-17703' '(at2g21440 : 657.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 28 (TAIR:AT5G18810.1); Has 993074 Blast hits to 495169 proteins in 22089 species: Archae - 21796; Bacteria - 609929; Metazoa - 180707; Fungi - 26716; Plants - 57391; Viruses - 71662; Other Eukaryotes - 24873 (source: NCBI BLink). & (gnl|cdd|35349 : 320.0) no description available & (reliability: 1314.0) & (original description: Putative rbm28, Description = RNA-binding protein 28, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00011663ctg002_3706-12046' '(at4g28990 : 84.7) RNA-binding protein-related; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); Has 1307 Blast hits to 1081 proteins in 160 species: Archae - 0; Bacteria - 36; Metazoa - 556; Fungi - 137; Plants - 464; Viruses - 16; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative L484_001933, Description = TATA-binding protein-associated factor 2N, PFAM = )' T '27.4' 'RNA.RNA binding' 'niben044scf00012146ctg006_2299-6917' '(at1g80930 : 484.0) MIF4G domain-containing protein / MA3 domain-containing protein; FUNCTIONS IN: RNA binding, binding; INVOLVED IN: translation, RNA metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: Initiation factor eIF-4 gamma, MA3 (TAIR:AT1G52325.1); Has 51676 Blast hits to 28577 proteins in 1484 species: Archae - 86; Bacteria - 5039; Metazoa - 22313; Fungi - 6500; Plants - 3817; Viruses - 357; Other Eukaryotes - 13564 (source: NCBI BLink). & (gnl|cdd|37351 : 463.0) no description available & (gnl|cdd|86149 : 110.0) no description available & (reliability: 968.0) & (original description: Putative ncm, Description = Pre-mRNA-splicing factor cwc22, PFAM = PF02854)' T '27.4' 'RNA.RNA binding' 'niben044scf00012208ctg029_1-4301' '(at3g13224 : 241.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G40490.1); Has 77800 Blast hits to 37058 proteins in 1622 species: Archae - 33; Bacteria - 18580; Metazoa - 32661; Fungi - 6344; Plants - 11400; Viruses - 392; Other Eukaryotes - 8390 (source: NCBI BLink). & (gnl|cdd|39406 : 129.0) no description available & (reliability: 482.0) & (original description: Putative rbp, Description = RNA recognition motif containing protein, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00012608ctg000_2977-7019' '(at4g35785 : 149.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: ribonucleoprotein complex, chloroplast; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G07350.1). & (gnl|cdd|47687 : 80.7) no description available & (reliability: 298.0) & (original description: Putative TRA2, Description = RNA-binding (RRM/RBD/RNP motifs) family protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00012693ctg004_1-6001' '(at5g53060 : 587.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1). & (gnl|cdd|37401 : 215.0) no description available & (reliability: 1174.0) & (original description: Putative BnaA02g10500D, Description = BnaA02g10500D protein, PFAM = PF00013;PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'niben044scf00012940ctg003_2028-8934' '(at2g38610 : 377.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT3G08620.1); Has 1345 Blast hits to 1344 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 813; Fungi - 157; Plants - 284; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|36801 : 211.0) no description available & (gnl|cdd|29005 : 148.0) no description available & (reliability: 742.0) & (original description: Putative qkib, Description = KH domain-containing protein, PFAM = PF16544;PF00013)' T '27.4' 'RNA.RNA binding' 'niben044scf00013051ctg010_4205-12043' '(at3g25470 : 327.0) bacterial hemolysin-related; FUNCTIONS IN: methyltransferase activity, RNA binding, nucleic acid binding; INVOLVED IN: methylation, hemolysis by symbiont of host erythrocytes; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding S4 (InterPro:IPR002942), Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877), Haemolysin A (InterPro:IPR004538); Has 3788 Blast hits to 3763 proteins in 1590 species: Archae - 10; Bacteria - 3068; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 663 (source: NCBI BLink). & (gnl|cdd|31382 : 225.0) no description available & (reliability: 654.0) & (original description: Putative tlyA, Description = 16S/23S rRNA (Cytidine-2'-O)-methyltransferase TlyA, PFAM = PF01728;PF01479)' T '27.4' 'RNA.RNA binding' 'niben044scf00015409ctg008_1-2699' '(at5g61030 : 136.0) encodes a glycine-rich RNA binding protein. Gene expression is induced by cold.; glycine-rich RNA-binding protein 3 (GR-RBP3); FUNCTIONS IN: RNA binding, copper ion binding, ATP binding; INVOLVED IN: response to cold; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 5 (TAIR:AT1G74230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q08937|roc2_nicsy : 95.1) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47687 : 90.3) no description available & (reliability: 272.0) & (original description: Putative RBG3, Description = Glycine-rich RNA-binding protein 3, mitochondrial, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00016826ctg000_4996-12176' '(at1g73530 : 134.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G54580.1); Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative BnaC02g22240D, Description = BnaC02g22240D protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00017222ctg012_282-3635' '(at3g04610 : 198.0) flowering locus KH domain (FLK); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: positive regulation of flower development; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26000.1); Has 8156 Blast hits to 5360 proteins in 381 species: Archae - 0; Bacteria - 269; Metazoa - 3587; Fungi - 776; Plants - 1209; Viruses - 216; Other Eukaryotes - 2099 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative flk, Description = Putative RNA binding protein, PFAM = PF00013)' T '27.4' 'RNA.RNA binding' 'niben044scf00017296ctg002_5045-8385' '(at2g26695 : 106.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT3G15680.1); Has 972 Blast hits to 658 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 112; Plants - 381; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative At2g26695, Description = Zinc finger (Ran-binding) family protein, PFAM = PF00641;PF00641)' T '27.4' 'RNA.RNA binding' 'niben044scf00017465ctg001_2651-5848' '(at4g13850 : 130.0) Encodes a glycine-rich RNA-binding protein. Gene expression is induced by cold.; GLYCINE-RICH RNA-BINDING PROTEIN 2 (ATGRP2); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding, copper ion binding, ATP binding; INVOLVED IN: response to cold, seed germination, response to osmotic stress; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 4 (TAIR:AT3G23830.2); Has 139 Blast hits to 139 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|47687 : 88.0) no description available & (gnl|cdd|35371 : 80.5) no description available & (reliability: 260.0) & (original description: Putative RBG4, Description = Glycine-rich RNA-binding protein 4, mitochondrial, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00018442ctg004_14054-19855' '(at1g76460 : 295.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G20880.2); Has 4261 Blast hits to 4252 proteins in 371 species: Archae - 0; Bacteria - 0; Metazoa - 1989; Fungi - 541; Plants - 1112; Viruses - 30; Other Eukaryotes - 589 (source: NCBI BLink). & (gnl|cdd|35371 : 162.0) no description available & (reliability: 590.0) & (original description: Putative BnaA07g32790D, Description = BnaA07g32790D protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00018646ctg010_100-5326' '(at3g19090 : 280.0) RNA-binding protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: ribonucleoprotein complex, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: RNA-binding protein (TAIR:AT2G43970.1); Has 912 Blast hits to 912 proteins in 142 species: Archae - 0; Bacteria - 2; Metazoa - 538; Fungi - 65; Plants - 233; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|37066 : 258.0) no description available & (gnl|cdd|47984 : 86.0) no description available & (reliability: 560.0) & (original description: Putative LARP6C, Description = La-related protein 6C, PFAM = PF07145;PF05383;PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00018787ctg000_900-9199' '(at5g19960 : 160.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47687 : 84.9) no description available & (reliability: 320.0) & (original description: Putative TCM_037971, Description = RNA-binding family protein, putative, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00019506ctg007_1-6099' '(at1g32790 : 347.0) RNA-binding protein, putative, similar to RNA-binding protein GB:CAB40027 GI:4539439 from (Arabidopsis thaliana).Member of a family of PAB2 binding domain proteins.; CTC-interacting domain 11 (CID11); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 12 (TAIR:AT4G10610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 694.0) & (original description: Putative c18, Description = Ataxin-2, C-terminal, PFAM = PF07145;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00020321ctg006_18129-24833' '(at3g13700 : 295.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G42240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36670 : 244.0) no description available & (reliability: 590.0) & (original description: Putative BnaC05g39630D, Description = BnaC05g39630D protein, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00020493ctg000_1095-5589' '(at1g21320 : 153.0) nucleotide binding;nucleic acid binding; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G76940.1); Has 568 Blast hits to 568 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 270; Fungi - 126; Plants - 140; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative RBP2, Description = RNA-binding protein 2, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00020580ctg004_1-4054' '(gnl|cdd|37351 : 475.0) no description available & (at1g80930 : 470.0) MIF4G domain-containing protein / MA3 domain-containing protein; FUNCTIONS IN: RNA binding, binding; INVOLVED IN: translation, RNA metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: Initiation factor eIF-4 gamma, MA3 (TAIR:AT1G52325.1); Has 51676 Blast hits to 28577 proteins in 1484 species: Archae - 86; Bacteria - 5039; Metazoa - 22313; Fungi - 6500; Plants - 3817; Viruses - 357; Other Eukaryotes - 13564 (source: NCBI BLink). & (gnl|cdd|86149 : 111.0) no description available & (reliability: 940.0) & (original description: Putative ncm, Description = Pre-mRNA-splicing factor cwc22, PFAM = PF02854)' T '27.4' 'RNA.RNA binding' 'niben044scf00022745ctg009_1-10030' '(at3g54230 : 588.0) Encodes a splicing factor SUA (suppressor of abi3-5), homologous to the human protein RBM5. Controls alternative splicing of the developmental regulator ABI3.; suppressor of abi3-5 (SUA); FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), D111/G-patch (InterPro:IPR000467), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: ortholog of human splicing factor SC35 (TAIR:AT5G64200.2). & (reliability: 1176.0) & (original description: Putative SUA, Description = SUPPRESSOR OF ABI3-5, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00023967ctg003_23650-29883' '(at2g35410 : 225.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: thylakoid, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G09040.1); Has 25515 Blast hits to 17648 proteins in 833 species: Archae - 12; Bacteria - 2210; Metazoa - 12015; Fungi - 3602; Plants - 4930; Viruses - 0; Other Eukaryotes - 2746 (source: NCBI BLink). & (p19684|roc5_nicsy : 123.0) 33 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|35333 : 87.0) no description available & (reliability: 450.0) & (original description: Putative PGSC0003DMG400017519, Description = 33 kDa ribonucleoprotein, chloroplastic, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00024267ctg000_1-2659' '(at1g37140 : 117.0) a member of mei2-like gene family; phylogenetic analysis revealed that it belongs to the fourth clade of mei2-like proteins, with conserved C-terminal RNA recognition motif (RRM) only.; MEI2 C-terminal RRM only like 1 (MCT1); CONTAINS InterPro DOMAIN/s: RNA recognition motif 2 (InterPro:IPR007201); BEST Arabidopsis thaliana protein match is: terminal EAR1-like 1 (TAIR:AT3G26120.1); Has 331 Blast hits to 331 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 29; Plants - 216; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|39859 : 114.0) no description available & (q27k34|pla2_orysa : 111.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (reliability: 234.0) & (original description: Putative LHD2, Description = MEI2-like protein 1, PFAM = PF04059)' T '27.4' 'RNA.RNA binding' 'niben044scf00025779ctg004_43229-46726' '(at3g12640 : 124.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Splicing factor PWI (InterPro:IPR002483); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G24350.1); Has 3110 Blast hits to 3077 proteins in 726 species: Archae - 48; Bacteria - 800; Metazoa - 1243; Fungi - 266; Plants - 328; Viruses - 0; Other Eukaryotes - 425 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative BnaA01g30430D, Description = Os04g0306800 protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00027081ctg024_10475-14931' '(at3g54770 : 180.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, gynoecium, carpel, stamen; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G76460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35371 : 164.0) no description available & (reliability: 360.0) & (original description: Putative ARP1, Description = Probable RNA-binding protein ARP1, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00027296ctg001_1523-4638' '(at3g04500 : 82.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition motif-related (InterPro:IPR015464); BEST Arabidopsis thaliana protein match is: oligouridylate binding protein 1B (TAIR:AT1G17370.1); Has 13292 Blast hits to 10995 proteins in 692 species: Archae - 0; Bacteria - 989; Metazoa - 6848; Fungi - 1697; Plants - 2705; Viruses - 0; Other Eukaryotes - 1053 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative At3g04500, Description = RNA-binding protein 42, PFAM = )' T '27.4' 'RNA.RNA binding' 'niben044scf00027401ctg011_1-2295' '(at2g28380 : 254.0) Encodes a cytoplasmic dsRNA-binding protein.; dsRNA-binding protein 2 (DRB2); CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 5 (TAIR:AT5G41070.1); Has 1035 Blast hits to 903 proteins in 271 species: Archae - 2; Bacteria - 346; Metazoa - 166; Fungi - 72; Plants - 365; Viruses - 9; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 508.0) & (original description: Putative DRB1501, Description = Double-stranded RNA binding protein, PFAM = PF00035;PF00035)' T '27.4' 'RNA.RNA binding' 'niben044scf00027674ctg019_1-8657' '(at4g24270 : 553.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 140 (EMB140); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lsm interaction (InterPro:IPR008669), RNA-processing protein, HAT helix (InterPro:IPR003107), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 6638 Blast hits to 6081 proteins in 560 species: Archae - 0; Bacteria - 845; Metazoa - 2454; Fungi - 1660; Plants - 947; Viruses - 0; Other Eukaryotes - 732 (source: NCBI BLink). & (gnl|cdd|35350 : 280.0) no description available & (reliability: 1106.0) & (original description: Putative EMB140, Description = Squamous cell carcinoma antigen recognized by T-cells 3, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00028406ctg012_1-4290' '(at1g21320 : 129.0) nucleotide binding;nucleic acid binding; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G76940.1); Has 568 Blast hits to 568 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 270; Fungi - 126; Plants - 140; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative NSRA, Description = Nuclear speckle RNA-binding protein A, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00030134ctg010_3062-10117' '(at5g09880 : 239.0) Splicing factor, CC1-like; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Splicing factor, CC1-like (InterPro:IPR006509), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Splicing factor, CC1-like (TAIR:AT2G16940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35369 : 222.0) no description available & (reliability: 478.0) & (original description: Putative rbm39, Description = RNA-binding protein 39, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00030413ctg002_1-7821' '(gnl|cdd|35340 : 118.0) no description available & (at4g00830 : 91.7) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G52660.2). & (reliability: 183.4) & (original description: Putative Os12g0577001, Description = Os12g0577001 protein, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00031169ctg002_4255-9200' '(at1g07350 : 123.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G35785.3); Has 999351 Blast hits to 998918 proteins in 36088 species: Archae - 21775; Bacteria - 603314; Metazoa - 202027; Fungi - 24253; Plants - 55487; Viruses - 69473; Other Eukaryotes - 23022 (source: NCBI BLink). & (gnl|cdd|47687 : 81.0) no description available & (reliability: 222.0) & (original description: Putative SR45A, Description = Serine/arginine-rich splicing factor SR45a, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00032374ctg004_2766-11769' '(at2g37510 : 125.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G54580.1); Has 146 Blast hits to 146 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|47687 : 80.7) no description available & (reliability: 250.0) & (original description: Putative LOC100283990, Description = RNA binding protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00034294ctg002_1618-5987' '(at3g07810 : 335.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G47620.2); Has 54120 Blast hits to 30425 proteins in 1467 species: Archae - 38; Bacteria - 13586; Metazoa - 19029; Fungi - 4969; Plants - 7799; Viruses - 151; Other Eukaryotes - 8548 (source: NCBI BLink). & (gnl|cdd|39406 : 221.0) no description available & (q08935|roc1_nicsy : 83.6) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (reliability: 670.0) & (original description: Putative msi1, Description = Putative heterogeneous nuclear ribonucleoprotein 1-like, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00034658ctg013_6013-21692' '(at5g15270 : 248.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G14170.3); Has 5625 Blast hits to 2559 proteins in 215 species: Archae - 0; Bacteria - 48; Metazoa - 3662; Fungi - 737; Plants - 967; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37401 : 205.0) no description available & (reliability: 496.0) & (original description: Putative PCBP, Description = K Homology domain-containing protein, PFAM = PF00013;PF00013;PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'niben044scf00035393ctg006_1-5954' '(at3g08620 : 362.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT2G38610.2); Has 1326 Blast hits to 1325 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 803; Fungi - 146; Plants - 286; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|36801 : 207.0) no description available & (gnl|cdd|29005 : 145.0) no description available & (reliability: 724.0) & (original description: Putative qk, Description = KH domain-containing protein, PFAM = PF00013;PF16544)' T '27.4' 'RNA.RNA binding' 'niben044scf00036252ctg002_664-4669' '(at3g52660 : 405.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35340 : 336.0) no description available & (reliability: 810.0) & (original description: Putative At3g52660, Description = Heterogeneous nuclear ribonucleoprotein Q, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00038001ctg003_11882-25984' '(at5g04430 : 295.0) Gene model AT5G04430.1 produces active protein. (BTS1S). Binds to ToMV genomic RNA and prevents viral multiplication.; binding to TOMV RNA 1L (long form) (BTR1L); CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 5613 Blast hits to 2614 proteins in 213 species: Archae - 0; Bacteria - 8; Metazoa - 3980; Fungi - 530; Plants - 787; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|37402 : 232.0) no description available & (reliability: 590.0) & (original description: Putative BTR1, Description = Protein BTR1, PFAM = PF00013;PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'niben044scf00041452ctg000_6545-18795' '(at3g45630 : 351.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|37279 : 221.0) no description available & (gnl|cdd|34774 : 218.0) no description available & (reliability: 690.0) & (original description: Putative NOT4, Description = CCR4-NOT transcription complex subunit 4, PFAM = PF14570;PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00043590ctg000_361-8288' '(at4g36960 : 417.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G07810.1); Has 349914 Blast hits to 333627 proteins in 17318 species: Archae - 7092; Bacteria - 199106; Metazoa - 73875; Fungi - 10838; Plants - 25006; Viruses - 24105; Other Eukaryotes - 9892 (source: NCBI BLink). & (gnl|cdd|39406 : 120.0) no description available & (reliability: 834.0) & (original description: Putative PHYPADRAFT_156290, Description = Predicted protein, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00047876ctg005_1-4725' '(at2g33435 : 134.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT4G36690.1); Has 62164 Blast hits to 35633 proteins in 1636 species: Archae - 185; Bacteria - 4712; Metazoa - 29770; Fungi - 5811; Plants - 3284; Viruses - 214; Other Eukaryotes - 18188 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative At2g33435, Description = Splicing factor U2AF 50 kDa subunit, PFAM = )' T '27.4' 'RNA.RNA binding' 'niben044scf00048777ctg000_2747-12028' '(gnl|cdd|35342 : 187.0) no description available & (at2g33440 : 137.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT1G60900.1); Has 807 Blast hits to 787 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 371; Fungi - 101; Plants - 250; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative At2g33435, Description = Putative ovule protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00059813ctg000_262-3855' '(p49314|roc2_nicpl : 386.0) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at2g37220 : 254.0) Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, poly(U) RNA binding; INVOLVED IN: response to cold, response to abscisic acid stimulus, innate immune response; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 29 (TAIR:AT3G53460.3); Has 997478 Blast hits to 497195 proteins in 22066 species: Archae - 21542; Bacteria - 603238; Metazoa - 188798; Fungi - 28200; Plants - 60491; Viruses - 70820; Other Eukaryotes - 24389 (source: NCBI BLink). & (gnl|cdd|35349 : 96.7) no description available & (gnl|cdd|31068 : 83.6) no description available & (reliability: 508.0) & (original description: Putative nbp1, Description = 31 kDa ribonucleoprotein, chloroplastic, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben044scf00061512ctg000_1-7006' '(at1g09660 : 311.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36801 : 195.0) no description available & (gnl|cdd|29005 : 146.0) no description available & (reliability: 622.0) & (original description: Putative qk, Description = KH domain-containing protein, PFAM = PF16544;PF00013)' T '27.4' 'RNA.RNA binding' 'niben101scf00025_128-7927' '(at5g46250 : 235.0) RNA-binding protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: ribonucleoprotein complex, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein (TAIR:AT2G43970.1); Has 1643 Blast hits to 1641 proteins in 213 species: Archae - 0; Bacteria - 0; Metazoa - 943; Fungi - 256; Plants - 299; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink). & (gnl|cdd|37066 : 219.0) no description available & (gnl|cdd|47984 : 113.0) no description available & (reliability: 470.0) & (original description: Putative LARP6A, Description = La-related protein 6A, PFAM = PF05383)' T '27.4' 'RNA.RNA binding' 'niben101scf00159_693771-703778' '(at3g07810 : 374.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G47620.2); Has 54120 Blast hits to 30425 proteins in 1467 species: Archae - 38; Bacteria - 13586; Metazoa - 19029; Fungi - 4969; Plants - 7799; Viruses - 151; Other Eukaryotes - 8548 (source: NCBI BLink). & (gnl|cdd|39406 : 231.0) no description available & (reliability: 748.0) & (original description: Putative MSI2H, Description = RNA-binding protein Musashi homolog 2, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf00163_24541-36737' '(at1g76460 : 293.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G20880.2); Has 4261 Blast hits to 4252 proteins in 371 species: Archae - 0; Bacteria - 0; Metazoa - 1989; Fungi - 541; Plants - 1112; Viruses - 30; Other Eukaryotes - 589 (source: NCBI BLink). & (gnl|cdd|35371 : 160.0) no description available & (reliability: 586.0) & (original description: Putative BnaA07g32790D, Description = BnaA07g32790D protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf00215_309653-313381' '(at5g61030 : 136.0) encodes a glycine-rich RNA binding protein. Gene expression is induced by cold.; glycine-rich RNA-binding protein 3 (GR-RBP3); FUNCTIONS IN: RNA binding, copper ion binding, ATP binding; INVOLVED IN: response to cold; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 5 (TAIR:AT1G74230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p19683|roc4_nicsy : 98.2) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47687 : 92.6) no description available & (gnl|cdd|35339 : 81.2) no description available & (reliability: 272.0) & (original description: Putative RBG4, Description = Glycine-rich RNA-binding protein 4, mitochondrial, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf00234_122888-130219' '(at3g21215 : 321.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G42240.1); Has 5454 Blast hits to 2765 proteins in 341 species: Archae - 4; Bacteria - 269; Metazoa - 1333; Fungi - 651; Plants - 2326; Viruses - 357; Other Eukaryotes - 514 (source: NCBI BLink). & (gnl|cdd|36670 : 145.0) no description available & (reliability: 642.0) & (original description: Putative prp3, Description = Proline rich protein 3, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf00262_306509-313121' '(at3g08620 : 363.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT2G38610.2); Has 1326 Blast hits to 1325 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 803; Fungi - 146; Plants - 286; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|36801 : 211.0) no description available & (gnl|cdd|29005 : 150.0) no description available & (reliability: 726.0) & (original description: Putative qk, Description = KH domain-containing protein, PFAM = PF16544;PF00013)' T '27.4' 'RNA.RNA binding' 'niben101scf00298_55188-73379' '(at3g14100 : 433.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: oligouridylate-binding protein 1A (TAIR:AT1G54080.1); Has 33134 Blast hits to 32894 proteins in 1695 species: Archae - 47; Bacteria - 3311; Metazoa - 12038; Fungi - 6892; Plants - 9686; Viruses - 3; Other Eukaryotes - 1157 (source: NCBI BLink). & (gnl|cdd|35370 : 133.0) no description available & (reliability: 866.0) & (original description: Putative ouBP, Description = Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf00338_303368-310592' '(at3g55340 : 243.0) Plant-specific protein. Interacts with phragmoplastin, Rop1 and Rop2. Involved in cell plate formation.; phragmoplastin interacting protein 1 (PHIP1); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G35410.1); Has 17490 Blast hits to 13137 proteins in 598 species: Archae - 10; Bacteria - 621; Metazoa - 8175; Fungi - 2466; Plants - 2451; Viruses - 16; Other Eukaryotes - 3751 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative NCL, Description = BnaA09g34920D protein, PFAM = PF00076;PF00076;PF00098)' T '27.4' 'RNA.RNA binding' 'niben101scf00341_287912-291942' '(at5g55670 : 150.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G13190.1). & (gnl|cdd|40046 : 89.0) no description available & (reliability: 300.0) & (original description: Putative At5g55670, Description = RNA recognition motif-containing protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf00366_1155121-1161583' '(at1g67325 : 304.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: TBP-associated factor 15 (TAIR:AT1G50300.1). & (reliability: 608.0) & (original description: Putative At1g67325, Description = RanBP2-type zinc finger protein At1g67325, PFAM = PF00641;PF00641;PF00641)' T '27.4' 'RNA.RNA binding' 'niben101scf00414_1115640-1131307' '(at3g13180 : 758.0) NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678), NusB/RsmB/TIM44 (InterPro:IPR006027); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G55920.1); Has 10280 Blast hits to 10234 proteins in 2431 species: Archae - 377; Bacteria - 6832; Metazoa - 588; Fungi - 364; Plants - 311; Viruses - 0; Other Eukaryotes - 1808 (source: NCBI BLink). & (gnl|cdd|36338 : 355.0) no description available & (gnl|cdd|30493 : 265.0) no description available & (reliability: 1516.0) & (original description: Putative sun, Description = Ribosomal RNA small subunit methyltransferase B, PFAM = PF01029;PF01189)' T '27.4' 'RNA.RNA binding' 'niben101scf00414_1126268-1129824' '(at3g13180 : 134.0) NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678), NusB/RsmB/TIM44 (InterPro:IPR006027); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G55920.1); Has 10280 Blast hits to 10234 proteins in 2431 species: Archae - 377; Bacteria - 6832; Metazoa - 588; Fungi - 364; Plants - 311; Viruses - 0; Other Eukaryotes - 1808 (source: NCBI BLink). & (gnl|cdd|36338 : 90.5) no description available & (reliability: 268.0) & (original description: Putative BnaA01g29950D, Description = Ribosomal RNA small subunit methyltransferase B, PFAM = PF01189)' T '27.4' 'RNA.RNA binding' 'niben101scf00438_136623-149050' '(at2g43410 : 515.0) FPA is a gene that regulates flowering time in Arabidopsis via a pathway that is independent of daylength (the autonomous pathway). Mutations in FPA result in extremely delayed flowering. Double mutants with FCA have reduced fertility and single/double mutants have defects in siRNA mediated chromatin silencing.; FPA; CONTAINS InterPro DOMAIN/s: Spen paralogue and orthologue SPOC, C-terminal (InterPro:IPR012921), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT4G12640.1); Has 504799 Blast hits to 501692 proteins in 22138 species: Archae - 10949; Bacteria - 306025; Metazoa - 96089; Fungi - 13914; Plants - 29775; Viruses - 36050; Other Eukaryotes - 11997 (source: NCBI BLink). & (gnl|cdd|35345 : 91.9) no description available & (reliability: 1030.0) & (original description: Putative FPA1, Description = Flowering time control protein FPA, PFAM = PF00076;PF00076;PF00076;PF07744)' T '27.4' 'RNA.RNA binding' 'niben101scf00508_881161-891151' '(at1g75670 : 211.0) DNA-directed RNA polymerases; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rpb7, N-terminal (InterPro:IPR005576); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative At1g75670, Description = DNA-directed RNA polymerase, PFAM = )' T '27.4' 'RNA.RNA binding' 'niben101scf00574_1104849-1108033' '(gnl|cdd|35337 : 179.0) no description available & (at5g12190 : 174.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G14870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative sap14, Description = Pre-mRNA branch site protein p14, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf00661_288850-305341' '(at1g70200 : 185.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleic acid binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504); Has 4744 Blast hits to 3664 proteins in 382 species: Archae - 19; Bacteria - 294; Metazoa - 1723; Fungi - 497; Plants - 212; Viruses - 61; Other Eukaryotes - 1938 (source: NCBI BLink). & (reliability: 370.0) & (original description: Putative PGSC0003DMG400015575, Description = F20P5.8, PFAM = )' T '27.4' 'RNA.RNA binding' 'niben101scf00671_65252-69501' '(at5g66010 : 268.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G20890.1). & (gnl|cdd|36579 : 166.0) no description available & (reliability: 536.0) & (original description: Putative Os11g0133600, Description = Heterogeneous nuclear ribonucleoprotein, putative, expressed, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf00705_515426-533700' '(at4g24270 : 765.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 140 (EMB140); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lsm interaction (InterPro:IPR008669), RNA-processing protein, HAT helix (InterPro:IPR003107), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 6638 Blast hits to 6081 proteins in 560 species: Archae - 0; Bacteria - 845; Metazoa - 2454; Fungi - 1660; Plants - 947; Viruses - 0; Other Eukaryotes - 732 (source: NCBI BLink). & (gnl|cdd|35350 : 402.0) no description available & (gnl|cdd|34710 : 95.6) no description available & (reliability: 1530.0) & (original description: Putative EMB140, Description = Protein embryo defective 140, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf00739_204779-231357' '(at2g26695 : 160.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT3G15680.1); Has 972 Blast hits to 658 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 112; Plants - 381; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|39399 : 87.1) no description available & (reliability: 320.0) & (original description: Putative umc1283, Description = Uncharacterized RNA-binding protein, PFAM = PF00641;PF00641)' T '27.4' 'RNA.RNA binding' 'niben101scf00739_275013-277949' '(at2g26695 : 149.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT3G15680.1); Has 972 Blast hits to 658 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 112; Plants - 381; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|39399 : 84.0) no description available & (reliability: 298.0) & (original description: Putative umc1283, Description = Zinc finger (Ran-binding) family protein, PFAM = PF00641;PF00641)' T '27.4' 'RNA.RNA binding' 'niben101scf00739_275178-282737' '(at2g26695 : 155.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT3G15680.1); Has 972 Blast hits to 658 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 112; Plants - 381; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|39399 : 84.0) no description available & (reliability: 310.0) & (original description: Putative BnaA07g12870D, Description = BnaA07g12870D protein, PFAM = PF00641;PF00641)' T '27.4' 'RNA.RNA binding' 'niben101scf00744_195353-209420' '(at1g09700 : 184.0) Encodes a nuclear dsRNA binding protein. Involved in mRNA cleavage. The mutant is characterized by shorter stature, delayed flowering, leaf hyponasty, reduced fertility, decreased rate of root growth, and an altered root gravitropic response. It also exhibits less sensitivity to auxin and cytokinin.; HYPONASTIC LEAVES 1 (HYL1); CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 2 (TAIR:AT2G28380.1); Has 992 Blast hits to 893 proteins in 320 species: Archae - 14; Bacteria - 506; Metazoa - 117; Fungi - 6; Plants - 270; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative DRB1501, Description = Double-stranded RNA binding protein, PFAM = PF00035;PF00035)' T '27.4' 'RNA.RNA binding' 'niben101scf00755_31866-42091' '(at3g04610 : 372.0) flowering locus KH domain (FLK); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: positive regulation of flower development; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26000.1); Has 8156 Blast hits to 5360 proteins in 381 species: Archae - 0; Bacteria - 269; Metazoa - 3587; Fungi - 776; Plants - 1209; Viruses - 216; Other Eukaryotes - 2099 (source: NCBI BLink). & (gnl|cdd|37401 : 131.0) no description available & (reliability: 744.0) & (original description: Putative flk, Description = Poly(RC)-binding protein 1, PFAM = PF00013;PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'niben101scf00825_456219-463465' '(at1g29400 : 725.0) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices.; MEI2-like protein 5 (ML5); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like 3 (TAIR:AT4G18120.2); Has 6281 Blast hits to 5530 proteins in 358 species: Archae - 4; Bacteria - 106; Metazoa - 3185; Fungi - 1006; Plants - 1245; Viruses - 0; Other Eukaryotes - 735 (source: NCBI BLink). & (gnl|cdd|39859 : 360.0) no description available & (gnl|cdd|67666 : 193.0) no description available & (q27k34|pla2_orysa : 121.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (reliability: 1450.0) & (original description: Putative ML5, Description = Protein MEI2-like 5, PFAM = PF00076;PF00076;PF04059)' T '27.4' 'RNA.RNA binding' 'niben101scf00856_23297-33346' '(at3g04610 : 399.0) flowering locus KH domain (FLK); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: positive regulation of flower development; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26000.1); Has 8156 Blast hits to 5360 proteins in 381 species: Archae - 0; Bacteria - 269; Metazoa - 3587; Fungi - 776; Plants - 1209; Viruses - 216; Other Eukaryotes - 2099 (source: NCBI BLink). & (gnl|cdd|37401 : 142.0) no description available & (reliability: 798.0) & (original description: Putative flk, Description = Putative RNA binding protein, PFAM = PF00013;PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'niben101scf00870_1801477-1807309' '(at1g17640 : 219.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G13224.2); Has 513802 Blast hits to 488537 proteins in 21806 species: Archae - 10521; Bacteria - 302893; Metazoa - 102492; Fungi - 14718; Plants - 34458; Viruses - 34904; Other Eukaryotes - 13816 (source: NCBI BLink). & (gnl|cdd|39406 : 174.0) no description available & (p19682|roc3_nicsy : 101.0) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|31068 : 87.8) no description available & (reliability: 438.0) & (original description: Putative Os08g0492100, Description = Os08g0492100 protein, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf00892_109970-115110' '(at4g20030 : 137.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G20930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative PGSC0003DMG400009433, Description = At4g20030, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf00929_63150-67295' '(p49310|grp1_sinal : 129.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 125.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|35331 : 85.6) no description available & (gnl|cdd|31068 : 83.2) no description available & (reliability: 250.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf00938_131087-139526' '(at5g04600 : 229.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT3G47120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39409 : 142.0) no description available & (reliability: 458.0) & (original description: Putative nifk, Description = Ribosomal biogenesis protein Gar2, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf01001_12791-18224' '(at3g51950 : 245.0) Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G63450.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative At3g51950, Description = Zinc finger CCCH domain-containing protein 46, PFAM = PF00076;PF00642)' T '27.4' 'RNA.RNA binding' 'niben101scf01009_298394-303667' '(at2g37340 : 195.0) encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks.; arginine/serine-rich zinc knuckle-containing protein 33 (RSZ33); FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT3G53500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative RS2Z34, Description = Arginine/serine-rich splicing factor RS2Z34 transcript V, PFAM = PF00098;PF00098;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf01033_273862-283284' '(at1g70650 : 247.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding, small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: mitochondrion, intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: MMS ZWEI homologue 2 (TAIR:AT1G70660.1). & (gnl|cdd|36114 : 206.0) no description available & (gnl|cdd|34682 : 90.7) no description available & (reliability: 494.0) & (original description: Putative UEV1B, Description = Ubiquitin-conjugating enzyme E2 variant 1B, PFAM = PF00179)' T '27.4' 'RNA.RNA binding' 'niben101scf01037_101488-105686' '(at3g08000 : 139.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 4 (TAIR:AT3G23830.2); Has 3547 Blast hits to 3487 proteins in 342 species: Archae - 0; Bacteria - 132; Metazoa - 639; Fungi - 851; Plants - 1534; Viruses - 0; Other Eukaryotes - 391 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative GRP1, Description = Glycine-rich RNA-binding protein 3, mitochondrial, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf01056_16530-144020' '(at5g25060 : 1071.0) RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA processing; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II, large subunit, CTD (InterPro:IPR006569), mRNA splicing factor, Cwf21 (InterPro:IPR013170), ENTH/VHS (InterPro:IPR008942), SWAP/Surp (InterPro:IPR000061), DNA-binding SAP (InterPro:IPR003034), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT5G10800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35373 : 766.0) no description available & (reliability: 2142.0) & (original description: Putative RRC1, Description = Protein RRC1, PFAM = PF00076;PF08312;PF01805)' T '27.4' 'RNA.RNA binding' 'niben101scf01063_377604-387821' '(at4g17720 : 281.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: oxidoreductase activity, nucleotide binding, nucleic acid binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G46870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 562.0) & (original description: Putative BPA1, Description = Binding partner of ACD11 1, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf01101_393516-408045' '(at5g01270 : 792.0) Encodes CPL2, a carboxyl-terminal domain (CTD) phosphatase that dephosphorylates CTD Ser5-PO4 of the RNA polymerase II complex. Regulates plant growth, stress and auxin responses.; carboxyl-terminal domain (ctd) phosphatase-like 2 (CPL2); FUNCTIONS IN: double-stranded RNA binding, phosphatase activity; INVOLVED IN: response to auxin stimulus, response to osmotic stress, developmental growth; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: C-terminal domain phosphatase-like 1 (TAIR:AT4G21670.1). & (gnl|cdd|35544 : 266.0) no description available & (reliability: 1584.0) & (original description: Putative CPL2, Description = RNA polymerase II C-terminal domain phosphatase-like 2, PFAM = PF00035;PF03031)' T '27.4' 'RNA.RNA binding' 'niben101scf01109_35666-58208' '(at1g32790 : 386.0) RNA-binding protein, putative, similar to RNA-binding protein GB:CAB40027 GI:4539439 from (Arabidopsis thaliana).Member of a family of PAB2 binding domain proteins.; CTC-interacting domain 11 (CID11); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 12 (TAIR:AT4G10610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 772.0) & (original description: Putative CID11, Description = Polyadenylate-binding protein-interacting protein 11, PFAM = PF07145;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf01109_68121-75777' '(at1g32790 : 342.0) RNA-binding protein, putative, similar to RNA-binding protein GB:CAB40027 GI:4539439 from (Arabidopsis thaliana).Member of a family of PAB2 binding domain proteins.; CTC-interacting domain 11 (CID11); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 12 (TAIR:AT4G10610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 684.0) & (original description: Putative c18, Description = Ataxin-2, C-terminal, PFAM = PF07145;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf01111_42697-49973' '(at4g11970 : 343.0) YTH family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 30 (TAIR:AT1G30460.1). & (gnl|cdd|37113 : 252.0) no description available & (gnl|cdd|67749 : 129.0) no description available & (reliability: 686.0) & (original description: Putative v1g17350, Description = Predicted protein, PFAM = PF04146)' T '27.4' 'RNA.RNA binding' 'niben101scf01181_259535-263170' '(at1g09700 : 81.3) Encodes a nuclear dsRNA binding protein. Involved in mRNA cleavage. The mutant is characterized by shorter stature, delayed flowering, leaf hyponasty, reduced fertility, decreased rate of root growth, and an altered root gravitropic response. It also exhibits less sensitivity to auxin and cytokinin.; HYPONASTIC LEAVES 1 (HYL1); CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 2 (TAIR:AT2G28380.1); Has 992 Blast hits to 893 proteins in 320 species: Archae - 14; Bacteria - 506; Metazoa - 117; Fungi - 6; Plants - 270; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative DRB1501, Description = Double-stranded RNA binding protein, PFAM = PF00035;PF00035)' T '27.4' 'RNA.RNA binding' 'niben101scf01190_227377-240805' '(q27k34|pla2_orysa : 120.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (at3g26120 : 112.0) Similar to terminal ear1 in Zea mays. A member of mei2-like gene family; phylogenetic analysis revealed that TEL1 belongs to the third clade of mei2-like proteins (TEL clade), with conserved two N-terminal RNA recognition motifs (RRM), in addition to the C-terminal RRM, shared among all mei2-like proteins.; terminal EAR1-like 1 (TEL1); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: primary root apical meristem, cotyledon primordium, shoot apical meristem, floral meristem, embryonic shoot apical meristem; EXPRESSED DURING: D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: terminal EAR1-like 2 (TAIR:AT1G67770.1); Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|39859 : 106.0) no description available & (gnl|cdd|67666 : 88.2) no description available & (reliability: 224.0) & (original description: Putative TEL1, Description = Terminal EAR1-like 1, PFAM = PF04059)' T '27.4' 'RNA.RNA binding' 'niben101scf01234_46539-51489' '(at3g07810 : 353.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G47620.2); Has 54120 Blast hits to 30425 proteins in 1467 species: Archae - 38; Bacteria - 13586; Metazoa - 19029; Fungi - 4969; Plants - 7799; Viruses - 151; Other Eukaryotes - 8548 (source: NCBI BLink). & (gnl|cdd|39406 : 230.0) no description available & (q08935|roc1_nicsy : 88.2) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|31068 : 83.2) no description available & (reliability: 706.0) & (original description: Putative At5g47620, Description = Putative RNA-binding protein, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf01240_714535-739398' '(at2g26695 : 107.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT3G15680.1); Has 972 Blast hits to 658 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 112; Plants - 381; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative At2g26695, Description = Zinc finger (Ran-binding) family protein, PFAM = PF00641)' T '27.4' 'RNA.RNA binding' 'niben101scf01240_737132-740338' '(at2g26695 : 153.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT3G15680.1); Has 972 Blast hits to 658 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 112; Plants - 381; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|39399 : 83.2) no description available & (reliability: 306.0) & (original description: Putative Os01g0555100, Description = Os01g0555100 protein, PFAM = PF00641;PF00641)' T '27.4' 'RNA.RNA binding' 'niben101scf01289_376686-381704' '(at3g54770 : 174.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, gynoecium, carpel, stamen; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G76460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35371 : 158.0) no description available & (reliability: 348.0) & (original description: Putative BnaA04g27710D, Description = BnaA04g27710D protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf01305_201369-218288' '(at1g80930 : 790.0) MIF4G domain-containing protein / MA3 domain-containing protein; FUNCTIONS IN: RNA binding, binding; INVOLVED IN: translation, RNA metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: Initiation factor eIF-4 gamma, MA3 (TAIR:AT1G52325.1); Has 51676 Blast hits to 28577 proteins in 1484 species: Archae - 86; Bacteria - 5039; Metazoa - 22313; Fungi - 6500; Plants - 3817; Viruses - 357; Other Eukaryotes - 13564 (source: NCBI BLink). & (gnl|cdd|37351 : 766.0) no description available & (gnl|cdd|86149 : 109.0) no description available & (reliability: 1580.0) & (original description: Putative CWC22, Description = Cwc22 pre-mRNA splicing factor, PFAM = PF02854;PF02847)' T '27.4' 'RNA.RNA binding' 'niben101scf01365_71351-79174' '(at1g51510 : 174.0) This gene is predicted to encode a protein involved in the exon junction complex. Though there is a predicted RNA binding motif, in the Drosophila ortholog (33% identity), this motif mediates interactions with Mago and is not available for RNA binding. The Arabidopsis Y14 protein appears to be predominantly nucleolar, but there is also some evidence for its presence in the cytoplasm.; Y14; FUNCTIONS IN: protein binding, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: nucleoplasm, exon-exon junction complex, nuclear body, nucleolus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA-binding motif protein 8 (InterPro:IPR008111); BEST Arabidopsis thaliana protein match is: ortholog of human splicing factor SC35 (TAIR:AT5G64200.2); Has 11259 Blast hits to 10017 proteins in 625 species: Archae - 2; Bacteria - 976; Metazoa - 6273; Fungi - 1165; Plants - 1793; Viruses - 0; Other Eukaryotes - 1050 (source: NCBI BLink). & (gnl|cdd|35352 : 163.0) no description available & (reliability: 348.0) & (original description: Putative tsu, Description = RNA-binding protein 8A, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf01414_238618-245008' '(at1g29400 : 686.0) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices.; MEI2-like protein 5 (ML5); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like 3 (TAIR:AT4G18120.2); Has 6281 Blast hits to 5530 proteins in 358 species: Archae - 4; Bacteria - 106; Metazoa - 3185; Fungi - 1006; Plants - 1245; Viruses - 0; Other Eukaryotes - 735 (source: NCBI BLink). & (gnl|cdd|39859 : 350.0) no description available & (gnl|cdd|67666 : 189.0) no description available & (q27k34|pla2_orysa : 122.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (reliability: 1372.0) & (original description: Putative ML2, Description = Protein MEI2-like 2, PFAM = PF00076;PF00076;PF04059)' T '27.4' 'RNA.RNA binding' 'niben101scf01448_204578-210335' '(at3g27700 : 492.0) zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); Has 3790 Blast hits to 2562 proteins in 343 species: Archae - 8; Bacteria - 521; Metazoa - 625; Fungi - 291; Plants - 164; Viruses - 7; Other Eukaryotes - 2174 (source: NCBI BLink). & (reliability: 984.0) & (original description: Putative At3g27700, Description = Zinc finger CCCH domain-containing protein 41, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf01517_429420-437796' '(at3g14450 : 308.0) RNA-binding protein, putative, contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (2 copies). Contains PAM PABC binding domain.; CTC-interacting domain 9 (CID9); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 8 (TAIR:AT1G53650.2); Has 3508 Blast hits to 2820 proteins in 274 species: Archae - 0; Bacteria - 0; Metazoa - 1915; Fungi - 426; Plants - 863; Viruses - 0; Other Eukaryotes - 304 (source: NCBI BLink). & (reliability: 616.0) & (original description: Putative c18, Description = Putative uncharacterized protein c18, PFAM = PF07145;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf01553_249962-260419' '(at4g36960 : 422.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G07810.1); Has 349914 Blast hits to 333627 proteins in 17318 species: Archae - 7092; Bacteria - 199106; Metazoa - 73875; Fungi - 10838; Plants - 25006; Viruses - 24105; Other Eukaryotes - 9892 (source: NCBI BLink). & (gnl|cdd|39406 : 128.0) no description available & (p19682|roc3_nicsy : 84.3) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (reliability: 844.0) & (original description: Putative BnaA03g53770D, Description = BnaA03g53770D protein, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf01579_179086-184409' '(at5g59950 : 162.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G02530.2). & (gnl|cdd|35753 : 131.0) no description available & (reliability: 324.0) & (original description: Putative aly, Description = ALY protein, PFAM = PF13865;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf01579_267128-272510' '(at3g46020 : 111.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G59860.1); Has 998870 Blast hits to 994912 proteins in 36005 species: Archae - 21618; Bacteria - 598911; Metazoa - 204417; Fungi - 25050; Plants - 56514; Viruses - 69090; Other Eukaryotes - 23270 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative BnaA02g06700D, Description = BnaA02g06700D protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf01611_819412-847163' '(at5g25060 : 1080.0) RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA processing; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II, large subunit, CTD (InterPro:IPR006569), mRNA splicing factor, Cwf21 (InterPro:IPR013170), ENTH/VHS (InterPro:IPR008942), SWAP/Surp (InterPro:IPR000061), DNA-binding SAP (InterPro:IPR003034), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT5G10800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35373 : 775.0) no description available & (reliability: 2160.0) & (original description: Putative RRC1, Description = Protein RRC1, PFAM = PF08312;PF00076;PF01805)' T '27.4' 'RNA.RNA binding' 'niben101scf01642_132314-140011' '(at4g03110 : 463.0) Encodes a putative RNA-binding protein that is located in the cytoplasm and is involved in the hypersensitive response and positively regulates salicylic acid-mediated immunity.; RNA-binding protein-defense related 1 (RBP-DR1); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: plant-type hypersensitive response, positive regulation of salicylic acid mediated signaling pathway; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Ribonucleoprotein, BRUNO-like (InterPro:IPR015903), Paraneoplastic encephalomyelitis antigen (InterPro:IPR002343), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G03457.1); Has 16162 Blast hits to 12321 proteins in 473 species: Archae - 8; Bacteria - 251; Metazoa - 10325; Fungi - 1647; Plants - 2258; Viruses - 0; Other Eukaryotes - 1673 (source: NCBI BLink). & (gnl|cdd|35366 : 349.0) no description available & (reliability: 926.0) & (original description: Putative BRN1, Description = RNA-binding protein BRN1, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf01727_364929-369930' '(at1g14340 : 202.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: oxidoreductase activity, nucleotide binding, nucleic acid binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G01210.1); Has 332 Blast hits to 332 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 92; Plants - 229; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative PGSC0003DMG400025609, Description = RNA recognition motif containing protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf01734_9158-20319' '(at3g25470 : 387.0) bacterial hemolysin-related; FUNCTIONS IN: methyltransferase activity, RNA binding, nucleic acid binding; INVOLVED IN: methylation, hemolysis by symbiont of host erythrocytes; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding S4 (InterPro:IPR002942), Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877), Haemolysin A (InterPro:IPR004538); Has 3788 Blast hits to 3763 proteins in 1590 species: Archae - 10; Bacteria - 3068; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 663 (source: NCBI BLink). & (gnl|cdd|31382 : 270.0) no description available & (reliability: 774.0) & (original description: Putative tlyA, Description = 16S/23S rRNA (Cytidine-2'-O)-methyltransferase TlyA, PFAM = PF01479;PF01728)' T '27.4' 'RNA.RNA binding' 'niben101scf01752_1047948-1053750' '(at3g07810 : 380.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G47620.2); Has 54120 Blast hits to 30425 proteins in 1467 species: Archae - 38; Bacteria - 13586; Metazoa - 19029; Fungi - 4969; Plants - 7799; Viruses - 151; Other Eukaryotes - 8548 (source: NCBI BLink). & (gnl|cdd|39406 : 232.0) no description available & (q08935|roc1_nicsy : 82.8) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (reliability: 760.0) & (original description: Putative RNP, Description = HnRNP, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf01759_412939-422174' '(at2g28380 : 297.0) Encodes a cytoplasmic dsRNA-binding protein.; dsRNA-binding protein 2 (DRB2); CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 5 (TAIR:AT5G41070.1); Has 1035 Blast hits to 903 proteins in 271 species: Archae - 2; Bacteria - 346; Metazoa - 166; Fungi - 72; Plants - 365; Viruses - 9; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 594.0) & (original description: Putative DRB5, Description = Double-stranded RNA-binding protein 2, PFAM = PF00035;PF00035)' T '27.4' 'RNA.RNA binding' 'niben101scf01785_123354-130593' '(at1g29400 : 593.0) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices.; MEI2-like protein 5 (ML5); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like 3 (TAIR:AT4G18120.2); Has 6281 Blast hits to 5530 proteins in 358 species: Archae - 4; Bacteria - 106; Metazoa - 3185; Fungi - 1006; Plants - 1245; Viruses - 0; Other Eukaryotes - 735 (source: NCBI BLink). & (gnl|cdd|39859 : 363.0) no description available & (gnl|cdd|67666 : 196.0) no description available & (q27k34|pla2_orysa : 122.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (reliability: 1186.0) & (original description: Putative AML1, Description = MEI2-like protein 5, PFAM = PF04059;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf01812_233379-248627' '(at2g44710 : 174.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (gnl|cdd|35340 : 171.0) no description available & (reliability: 348.0) & (original description: Putative Os07g0180800, Description = Putative nucleolin 2-like, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf01818_236889-246404' '(at3g45630 : 361.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|37279 : 220.0) no description available & (gnl|cdd|34774 : 219.0) no description available & (reliability: 712.0) & (original description: Putative BnaC03g55430D, Description = BnaC03g55430D protein, PFAM = PF00076;PF14570)' T '27.4' 'RNA.RNA binding' 'niben101scf01866_94301-97184' '(at3g46020 : 96.3) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G59860.1); Has 998870 Blast hits to 994912 proteins in 36005 species: Archae - 21618; Bacteria - 598911; Metazoa - 204417; Fungi - 25050; Plants - 56514; Viruses - 69090; Other Eukaryotes - 23270 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative MtrDRAFT_AC149210g20v2, Description = RNA-binding region RNP-1 (RNA recognition motif), PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf01938_468271-471284' '(at3g56860 : 139.0) encodes a nuclear protein that binds to RNA with a specificity for oligouridylates in vitro. Along with UBP1 and UBA1a, it may act as a component of a complex recognizing U-rich sequences in plant 3'-UTRs and contributing to the stabilization of mRNAs in the nucleus.; UBP1-associated protein 2A (UBA2A); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G41060.2). & (gnl|cdd|35371 : 90.2) no description available & (reliability: 278.0) & (original description: Putative UBA1A, Description = Nucleotide-binding, alpha-beta plait, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf01948_70479-75550' '(p19682|roc3_nicsy : 480.0) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (at4g24770 : 285.0) Encodes a chloroplast RNA-binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Required for editing and stability of specific chloroplast mRNAs.; 31-kDa RNA binding protein (RBP31); FUNCTIONS IN: RNA binding, poly(U) RNA binding; INVOLVED IN: RNA modification, RNA processing, innate immune response; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 31B (TAIR:AT5G50250.1); Has 997248 Blast hits to 498569 proteins in 22111 species: Archae - 21618; Bacteria - 606023; Metazoa - 186637; Fungi - 27654; Plants - 60055; Viruses - 71042; Other Eukaryotes - 24219 (source: NCBI BLink). & (gnl|cdd|35349 : 107.0) no description available & (gnl|cdd|47687 : 82.6) no description available & (reliability: 570.0) & (original description: Putative nbp1, Description = 28 kDa ribonucleoprotein, chloroplastic, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf01982_84992-93196' '(at5g19960 : 136.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47687 : 84.9) no description available & (reliability: 272.0) & (original description: Putative TCM_037971, Description = RNA-binding family protein, putative, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf01985_357385-365200' '(at4g03110 : 468.0) Encodes a putative RNA-binding protein that is located in the cytoplasm and is involved in the hypersensitive response and positively regulates salicylic acid-mediated immunity.; RNA-binding protein-defense related 1 (RBP-DR1); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: plant-type hypersensitive response, positive regulation of salicylic acid mediated signaling pathway; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Ribonucleoprotein, BRUNO-like (InterPro:IPR015903), Paraneoplastic encephalomyelitis antigen (InterPro:IPR002343), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G03457.1); Has 16162 Blast hits to 12321 proteins in 473 species: Archae - 8; Bacteria - 251; Metazoa - 10325; Fungi - 1647; Plants - 2258; Viruses - 0; Other Eukaryotes - 1673 (source: NCBI BLink). & (gnl|cdd|35366 : 392.0) no description available & (reliability: 936.0) & (original description: Putative BRN1, Description = RNA-binding protein BRN1, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf01999_445459-457230' '(at1g74520 : 105.0) Part of the AtHVA22a family. Protein expression is ABA- and stress-inducible.; HVA22 homologue A (HVA22A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, response to cold, hyperosmotic salinity response, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue C (TAIR:AT1G69700.1); Has 1523 Blast hits to 1523 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 215; Plants - 516; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|86250 : 99.5) no description available & (gnl|cdd|36936 : 87.4) no description available & (reliability: 206.0) & (original description: Putative PGSC0003DMG400030143, Description = HVA22-like protein, PFAM = PF12874;PF12874;PF12874;PF03134)' T '27.4' 'RNA.RNA binding' 'niben101scf02001_96520-122950' '(at4g35785 : 146.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: ribonucleoprotein complex, chloroplast; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G07350.1). & (reliability: 292.0) & (original description: Putative TRA2, Description = RNA-binding (RRM/RBD/RNP motifs) family protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf02048_107716-112716' '(at3g07810 : 323.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G47620.2); Has 54120 Blast hits to 30425 proteins in 1467 species: Archae - 38; Bacteria - 13586; Metazoa - 19029; Fungi - 4969; Plants - 7799; Viruses - 151; Other Eukaryotes - 8548 (source: NCBI BLink). & (gnl|cdd|39406 : 224.0) no description available & (q08935|roc1_nicsy : 85.5) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (reliability: 646.0) & (original description: Putative DAZAP1, Description = Daz-associated protein 1, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf02078_926130-933841' '(at1g17640 : 218.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G13224.2); Has 513802 Blast hits to 488537 proteins in 21806 species: Archae - 10521; Bacteria - 302893; Metazoa - 102492; Fungi - 14718; Plants - 34458; Viruses - 34904; Other Eukaryotes - 13816 (source: NCBI BLink). & (gnl|cdd|39406 : 189.0) no description available & (p19682|roc3_nicsy : 94.0) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|31068 : 93.6) no description available & (reliability: 436.0) & (original description: Putative RNP, Description = Heterogeneous nuclear ribonucleoprotein 27C, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf02294_164453-172466' '(at1g51580 : 281.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 6723 Blast hits to 3876 proteins in 329 species: Archae - 3; Bacteria - 266; Metazoa - 4280; Fungi - 575; Plants - 1237; Viruses - 20; Other Eukaryotes - 342 (source: NCBI BLink). & (gnl|cdd|37401 : 210.0) no description available & (reliability: 534.0) & (original description: Putative HEN4, Description = RNA-binding KH domain protein, PFAM = PF00013;PF00013;PF00013;PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'niben101scf02399_128727-140330' '(gnl|cdd|37401 : 187.0) no description available & (at1g51580 : 183.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 6723 Blast hits to 3876 proteins in 329 species: Archae - 3; Bacteria - 266; Metazoa - 4280; Fungi - 575; Plants - 1237; Viruses - 20; Other Eukaryotes - 342 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative PGSC0003DMG400016189, Description = RNA-binding KH domain-containing protein, putative isoform 4, PFAM = PF00013;PF00013;PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'niben101scf02407_147290-156852' '(at2g44710 : 499.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (gnl|cdd|35340 : 165.0) no description available & (reliability: 998.0) & (original description: Putative ws1, Description = Water-stress protein, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf02468_87694-99303' '(at5g04430 : 332.0) Gene model AT5G04430.1 produces active protein. (BTS1S). Binds to ToMV genomic RNA and prevents viral multiplication.; binding to TOMV RNA 1L (long form) (BTR1L); CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 5613 Blast hits to 2614 proteins in 213 species: Archae - 0; Bacteria - 8; Metazoa - 3980; Fungi - 530; Plants - 787; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|37402 : 238.0) no description available & (reliability: 664.0) & (original description: Putative BTR1, Description = Binding to TOMV RNA 1L (Long form) protein, PFAM = PF00013;PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'niben101scf02471_499374-506911' '(at2g44710 : 476.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (gnl|cdd|35340 : 173.0) no description available & (reliability: 952.0) & (original description: Putative ws1, Description = Heterogeneous nuclear ribonucleoprotein Q, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf02475_886289-905678' '(at1g09230 : 385.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); Has 908 Blast hits to 898 proteins in 138 species: Archae - 0; Bacteria - 6; Metazoa - 655; Fungi - 76; Plants - 104; Viruses - 1; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 770.0) & (original description: Putative SNRNP65, Description = RNA-binding protein 40, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf02509_941672-952991' '(at3g12640 : 334.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Splicing factor PWI (InterPro:IPR002483); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G24350.1); Has 3110 Blast hits to 3077 proteins in 726 species: Archae - 48; Bacteria - 800; Metazoa - 1243; Fungi - 266; Plants - 328; Viruses - 0; Other Eukaryotes - 425 (source: NCBI BLink). & (gnl|cdd|38906 : 189.0) no description available & (reliability: 668.0) & (original description: Putative At3g12640, Description = RNA binding (RRM/RBD/RNP motifs) family protein, PFAM = PF00076;PF01480)' T '27.4' 'RNA.RNA binding' 'niben101scf02517_1668622-1678597' '(at5g19960 : 95.1) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative , Description = , PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf02547_68436-76701' '(at5g06210 : 153.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 5 (TAIR:AT1G74230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47687 : 86.4) no description available & (q05966|grp10_brana : 81.3) Glycine-rich RNA-binding protein 10 - Brassica napus (Rape) & (reliability: 306.0) & (original description: Putative At5g06210, Description = Putative uncharacterized protein At5g06210, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf02625_147996-157106' '(p19683|roc4_nicsy : 504.0) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (at4g24770 : 250.0) Encodes a chloroplast RNA-binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Required for editing and stability of specific chloroplast mRNAs.; 31-kDa RNA binding protein (RBP31); FUNCTIONS IN: RNA binding, poly(U) RNA binding; INVOLVED IN: RNA modification, RNA processing, innate immune response; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 31B (TAIR:AT5G50250.1); Has 997248 Blast hits to 498569 proteins in 22111 species: Archae - 21618; Bacteria - 606023; Metazoa - 186637; Fungi - 27654; Plants - 60055; Viruses - 71042; Other Eukaryotes - 24219 (source: NCBI BLink). & (gnl|cdd|35349 : 102.0) no description available & (gnl|cdd|47687 : 83.7) no description available & (reliability: 500.0) & (original description: Putative nbp1, Description = 28 kDa ribonucleoprotein, chloroplastic, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf02665_1528443-1536444' '(at2g38610 : 445.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT3G08620.1); Has 1345 Blast hits to 1344 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 813; Fungi - 157; Plants - 284; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|36801 : 228.0) no description available & (gnl|cdd|29005 : 152.0) no description available & (reliability: 820.0) & (original description: Putative qk, Description = KH domain-containing protein, PFAM = PF00013;PF16544)' T '27.4' 'RNA.RNA binding' 'niben101scf02668_2335-7534' '(at5g12440 : 315.0) CCCH-type zinc fingerfamily protein with RNA-binding domain; FUNCTIONS IN: nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G21100.2). & (reliability: 596.0) & (original description: Putative Os07g0682400, Description = Zinc finger CCCH domain-containing protein 53, PFAM = PF00642;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf02669_551013-570546' '(at2g28380 : 291.0) Encodes a cytoplasmic dsRNA-binding protein.; dsRNA-binding protein 2 (DRB2); CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 5 (TAIR:AT5G41070.1); Has 1035 Blast hits to 903 proteins in 271 species: Archae - 2; Bacteria - 346; Metazoa - 166; Fungi - 72; Plants - 365; Viruses - 9; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 582.0) & (original description: Putative DRB2, Description = Double-stranded RNA-binding protein 2, PFAM = PF00035;PF00035)' T '27.4' 'RNA.RNA binding' 'niben101scf02774_332527-338281' '(at5g37720 : 179.0) ALWAYS EARLY 4 (ALY4); FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G66260.2); Has 5809 Blast hits to 5449 proteins in 440 species: Archae - 2; Bacteria - 280; Metazoa - 2763; Fungi - 1142; Plants - 1077; Viruses - 9; Other Eukaryotes - 536 (source: NCBI BLink). & (gnl|cdd|35753 : 127.0) no description available & (reliability: 358.0) & (original description: Putative aly, Description = ALY protein, PFAM = PF00076;PF13865)' T '27.4' 'RNA.RNA binding' 'niben101scf02797_54276-59866' '(at3g13224 : 249.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G40490.1); Has 77800 Blast hits to 37058 proteins in 1622 species: Archae - 33; Bacteria - 18580; Metazoa - 32661; Fungi - 6344; Plants - 11400; Viruses - 392; Other Eukaryotes - 8390 (source: NCBI BLink). & (gnl|cdd|39406 : 150.0) no description available & (p49313|roc1_nicpl : 86.3) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 498.0) & (original description: Putative GTBP1, Description = G-strand specific single-stranded telomere-binding protein 1, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf02803_438799-441583' '(at3g10400 : 186.0) RNA recognition motif and CCHC-type zinc finger domains containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Ribonucleoprotein, BRUNO-like (InterPro:IPR015903), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: ortholog of human splicing factor SC35 (TAIR:AT5G64200.2); Has 867 Blast hits to 867 proteins in 310 species: Archae - 0; Bacteria - 0; Metazoa - 452; Fungi - 160; Plants - 158; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative SNRNP31, Description = U11/U12 small nuclear ribonucleoprotein 31 kDa protein, PFAM = PF00076;PF00098)' T '27.4' 'RNA.RNA binding' 'niben101scf02819_781311-796854' '(at5g04430 : 203.0) Gene model AT5G04430.1 produces active protein. (BTS1S). Binds to ToMV genomic RNA and prevents viral multiplication.; binding to TOMV RNA 1L (long form) (BTR1L); CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 5613 Blast hits to 2614 proteins in 213 species: Archae - 0; Bacteria - 8; Metazoa - 3980; Fungi - 530; Plants - 787; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|37402 : 112.0) no description available & (reliability: 406.0) & (original description: Putative BTR1, Description = Binding to TOMV RNA 1L (Long form) protein, PFAM = PF00013)' T '27.4' 'RNA.RNA binding' 'niben101scf02819_785803-788288' '(gnl|cdd|37402 : 128.0) no description available & (at5g04430 : 107.0) Gene model AT5G04430.1 produces active protein. (BTS1S). Binds to ToMV genomic RNA and prevents viral multiplication.; binding to TOMV RNA 1L (long form) (BTR1L); CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 5613 Blast hits to 2614 proteins in 213 species: Archae - 0; Bacteria - 8; Metazoa - 3980; Fungi - 530; Plants - 787; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative BTR1, Description = Binding to TOMV RNA 1L (Long form) protein, PFAM = PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'niben101scf02821_589845-596950' '(at5g46840 : 302.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G13224.2); Has 3214 Blast hits to 3009 proteins in 274 species: Archae - 0; Bacteria - 38; Metazoa - 1562; Fungi - 589; Plants - 622; Viruses - 0; Other Eukaryotes - 403 (source: NCBI BLink). & (reliability: 604.0) & (original description: Putative Sb01g000750, Description = Putative uncharacterized protein Sb01g000750, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf02840_145429-152993' '(at5g15270 : 494.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G14170.3); Has 5625 Blast hits to 2559 proteins in 215 species: Archae - 0; Bacteria - 48; Metazoa - 3662; Fungi - 737; Plants - 967; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37401 : 295.0) no description available & (reliability: 988.0) & (original description: Putative nabp, Description = KH domain-containing protein, PFAM = PF00013;PF00013;PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'niben101scf02840_146722-150142' '(at5g15270 : 224.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G14170.3); Has 5625 Blast hits to 2559 proteins in 215 species: Archae - 0; Bacteria - 48; Metazoa - 3662; Fungi - 737; Plants - 967; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37401 : 128.0) no description available & (reliability: 448.0) & (original description: Putative nabp, Description = KH domain-containing protein, PFAM = PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'niben101scf02844_1278381-1286161' '(at5g46840 : 311.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G13224.2); Has 3214 Blast hits to 3009 proteins in 274 species: Archae - 0; Bacteria - 38; Metazoa - 1562; Fungi - 589; Plants - 622; Viruses - 0; Other Eukaryotes - 403 (source: NCBI BLink). & (reliability: 622.0) & (original description: Putative At5g46840, Description = At5g46840, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf02864_691839-699319' '(at2g44710 : 275.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (gnl|cdd|35340 : 168.0) no description available & (gnl|cdd|34868 : 94.8) no description available & (reliability: 550.0) & (original description: Putative ws1, Description = Heterogeneous nuclear ribonucleoprotein Q, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf02892_183034-196914' '(at1g09660 : 323.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36801 : 196.0) no description available & (gnl|cdd|29005 : 146.0) no description available & (reliability: 646.0) & (original description: Putative qk, Description = KH domain-containing protein, PFAM = PF16544;PF00013)' T '27.4' 'RNA.RNA binding' 'niben101scf02945_250462-257471' '(at3g16810 : 619.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 24 (PUM24); FUNCTIONS IN: RNA binding, binding; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 5 (TAIR:AT3G20250.1); Has 2337 Blast hits to 1306 proteins in 237 species: Archae - 0; Bacteria - 1; Metazoa - 1209; Fungi - 478; Plants - 404; Viruses - 0; Other Eukaryotes - 245 (source: NCBI BLink). & (gnl|cdd|37261 : 372.0) no description available & (reliability: 1238.0) & (original description: Putative APUM24, Description = Pumilio homolog 24, PFAM = PF08144)' T '27.4' 'RNA.RNA binding' 'niben101scf02947_79611-92223' '(at5g09880 : 440.0) Splicing factor, CC1-like; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Splicing factor, CC1-like (InterPro:IPR006509), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Splicing factor, CC1-like (TAIR:AT2G16940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35369 : 378.0) no description available & (reliability: 880.0) & (original description: Putative RBM39, Description = RBM39, PFAM = PF15519;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf02947_84420-87384' '(at5g09880 : 142.0) Splicing factor, CC1-like; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Splicing factor, CC1-like (InterPro:IPR006509), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Splicing factor, CC1-like (TAIR:AT2G16940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35369 : 117.0) no description available & (reliability: 284.0) & (original description: Putative pco133413, Description = RNA-binding protein 39, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf02949_384972-388915' '(at1g13190 : 203.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G55670.1); Has 32447 Blast hits to 17825 proteins in 1064 species: Archae - 7; Bacteria - 12227; Metazoa - 10368; Fungi - 2543; Plants - 3608; Viruses - 174; Other Eukaryotes - 3520 (source: NCBI BLink). & (reliability: 406.0) & (original description: Putative F3F19.21, Description = F3F19.21 protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf02971_14146-22694' '(at3g14450 : 332.0) RNA-binding protein, putative, contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (2 copies). Contains PAM PABC binding domain.; CTC-interacting domain 9 (CID9); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 8 (TAIR:AT1G53650.2); Has 3508 Blast hits to 2820 proteins in 274 species: Archae - 0; Bacteria - 0; Metazoa - 1915; Fungi - 426; Plants - 863; Viruses - 0; Other Eukaryotes - 304 (source: NCBI BLink). & (reliability: 664.0) & (original description: Putative c18, Description = Putative uncharacterized protein c18, PFAM = PF07145;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf02982_350032-354502' '(at4g13850 : 149.0) Encodes a glycine-rich RNA-binding protein. Gene expression is induced by cold.; GLYCINE-RICH RNA-BINDING PROTEIN 2 (ATGRP2); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding, copper ion binding, ATP binding; INVOLVED IN: response to cold, seed germination, response to osmotic stress; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 4 (TAIR:AT3G23830.2); Has 139 Blast hits to 139 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q03878|grp1_dauca : 96.7) Glycine-rich RNA-binding protein - Daucus carota (Carrot) & (gnl|cdd|47687 : 86.1) no description available & (gnl|cdd|35331 : 84.8) no description available & (reliability: 298.0) & (original description: Putative RBG4, Description = Glycine-rich RNA-binding protein 4, mitochondrial, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf03015_490276-518577' '(at5g15270 : 242.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G14170.3); Has 5625 Blast hits to 2559 proteins in 215 species: Archae - 0; Bacteria - 48; Metazoa - 3662; Fungi - 737; Plants - 967; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37401 : 209.0) no description available & (reliability: 484.0) & (original description: Putative PCBP, Description = RNA-binding KH domain-containing protein isoform 1, PFAM = PF00013;PF00013;PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'niben101scf03018_172094-175116' '(at3g56860 : 141.0) encodes a nuclear protein that binds to RNA with a specificity for oligouridylates in vitro. Along with UBP1 and UBA1a, it may act as a component of a complex recognizing U-rich sequences in plant 3'-UTRs and contributing to the stabilization of mRNAs in the nucleus.; UBP1-associated protein 2A (UBA2A); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G41060.2). & (gnl|cdd|35371 : 84.0) no description available & (reliability: 282.0) & (original description: Putative UBA1A, Description = Heterogeneous nuclear ribonucleoprotein D0, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf03036_864366-872006' '(at2g43370 : 288.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: U1 small nuclear ribonucleoprotein-70K (TAIR:AT3G50670.1); Has 272 Blast hits to 272 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 270; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|35336 : 167.0) no description available & (reliability: 576.0) & (original description: Putative SNRNP35, Description = U11/U12 small nuclear ribonucleoprotein 35 kDa protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf03080_110647-115849' '(gnl|cdd|37066 : 255.0) no description available & (at3g19090 : 240.0) RNA-binding protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: ribonucleoprotein complex, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: RNA-binding protein (TAIR:AT2G43970.1); Has 912 Blast hits to 912 proteins in 142 species: Archae - 0; Bacteria - 2; Metazoa - 538; Fungi - 65; Plants - 233; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|47984 : 85.6) no description available & (reliability: 480.0) & (original description: Putative LARP6C, Description = La-related protein 6C, PFAM = PF05383;PF07145;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf03213_31677-38857' '(at1g73530 : 133.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G54580.1); Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative BnaC02g22240D, Description = BnaC02g22240D protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf03214_20133-23489' '(p49310|grp1_sinal : 133.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 129.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 94.0) no description available & (gnl|cdd|35331 : 87.9) no description available & (reliability: 258.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf03254_1221284-1228071' '(at3g27700 : 492.0) zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); Has 3790 Blast hits to 2562 proteins in 343 species: Archae - 8; Bacteria - 521; Metazoa - 625; Fungi - 291; Plants - 164; Viruses - 7; Other Eukaryotes - 2174 (source: NCBI BLink). & (reliability: 984.0) & (original description: Putative At3g27700, Description = Zinc finger CCCH domain-containing protein 41, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf03273_346573-366806' '(at5g25060 : 994.0) RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA processing; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II, large subunit, CTD (InterPro:IPR006569), mRNA splicing factor, Cwf21 (InterPro:IPR013170), ENTH/VHS (InterPro:IPR008942), SWAP/Surp (InterPro:IPR000061), DNA-binding SAP (InterPro:IPR003034), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT5G10800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35373 : 735.0) no description available & (reliability: 1988.0) & (original description: Putative RRC1, Description = Protein RRC1, PFAM = PF08312;PF00076;PF01805)' T '27.4' 'RNA.RNA binding' 'niben101scf03273_352965-358400' '(at5g25060 : 189.0) RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA processing; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II, large subunit, CTD (InterPro:IPR006569), mRNA splicing factor, Cwf21 (InterPro:IPR013170), ENTH/VHS (InterPro:IPR008942), SWAP/Surp (InterPro:IPR000061), DNA-binding SAP (InterPro:IPR003034), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT5G10800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35373 : 177.0) no description available & (reliability: 378.0) & (original description: Putative RRC1, Description = U2 snRNP-associated SURP motif-containing protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf03300_215650-221158' '(gnl|cdd|37066 : 250.0) no description available & (at3g19090 : 242.0) RNA-binding protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: ribonucleoprotein complex, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: RNA-binding protein (TAIR:AT2G43970.1); Has 912 Blast hits to 912 proteins in 142 species: Archae - 0; Bacteria - 2; Metazoa - 538; Fungi - 65; Plants - 233; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|47984 : 86.0) no description available & (reliability: 484.0) & (original description: Putative FIP1, Description = La-related protein 7, PFAM = PF05383;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf03403_94644-100280' '(at1g09700 : 200.0) Encodes a nuclear dsRNA binding protein. Involved in mRNA cleavage. The mutant is characterized by shorter stature, delayed flowering, leaf hyponasty, reduced fertility, decreased rate of root growth, and an altered root gravitropic response. It also exhibits less sensitivity to auxin and cytokinin.; HYPONASTIC LEAVES 1 (HYL1); CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 2 (TAIR:AT2G28380.1); Has 992 Blast hits to 893 proteins in 320 species: Archae - 14; Bacteria - 506; Metazoa - 117; Fungi - 6; Plants - 270; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (reliability: 400.0) & (original description: Putative DRB1501, Description = Double-stranded RNA binding protein, PFAM = PF00035;PF00035)' T '27.4' 'RNA.RNA binding' 'niben101scf03526_138490-143493' '(at1g60000 : 270.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 8 Blast hits to 8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q08935|roc1_nicsy : 154.0) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|84495 : 84.1) no description available & (gnl|cdd|35349 : 83.2) no description available & (reliability: 540.0) & (original description: Putative rbp33, Description = 33 kDa ribonucleoprotein, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf03572_15117-20310' '(at3g21100 : 295.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G51520.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 590.0) & (original description: Putative Os03g0328900, Description = Zinc finger CCCH domain-containing protein 22, PFAM = PF00642;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf03673_330971-335213' '(at5g66010 : 267.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G20890.1). & (gnl|cdd|36579 : 165.0) no description available & (reliability: 534.0) & (original description: Putative Os11g0133600, Description = Heterogeneous nuclear ribonucleoprotein, putative, expressed, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf03708_53316-58543' '(at1g70650 : 379.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding, small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: mitochondrion, intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: MMS ZWEI homologue 2 (TAIR:AT1G70660.1). & (gnl|cdd|39399 : 112.0) no description available & (reliability: 758.0) & (original description: Putative At1g70650, Description = Zinc finger (Ran-binding) domain-containing protein, PFAM = PF00641;PF00641;PF00641)' T '27.4' 'RNA.RNA binding' 'niben101scf03778_245147-251851' '(at3g13700 : 311.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G42240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36670 : 244.0) no description available & (reliability: 622.0) & (original description: Putative At3g13700, Description = RNA recognition motif-containing protein, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf03863_52330-65627' '(at3g15010 : 160.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: leaf senescence, cell death, ethylene biosynthetic process, defense response; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G41060.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39406 : 100.0) no description available & (p82277|rrp2_spiol : 86.7) Plastid-specific 30S ribosomal protein 2, chloroplast precursor (PSRP-2) - Spinacia oleracea (Spinach) & (reliability: 320.0) & (original description: Putative Ccrd_018189, Description = Nucleotide-binding, alpha-beta plait, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf03918_16679-27235' '(at3g04500 : 255.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition motif-related (InterPro:IPR015464); BEST Arabidopsis thaliana protein match is: oligouridylate binding protein 1B (TAIR:AT1G17370.1); Has 13292 Blast hits to 10995 proteins in 692 species: Archae - 0; Bacteria - 989; Metazoa - 6848; Fungi - 1697; Plants - 2705; Viruses - 0; Other Eukaryotes - 1053 (source: NCBI BLink). & (gnl|cdd|35447 : 206.0) no description available & (reliability: 510.0) & (original description: Putative v1g108798, Description = Predicted protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf03932_401104-409954' '(at5g46190 : 550.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G18375.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37401 : 243.0) no description available & (reliability: 1100.0) & (original description: Putative At4g18375, Description = KH domain-containing protein At4g18375, PFAM = PF00013;PF00013;PF00013;PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'niben101scf03948_91284-107583' '(at3g04610 : 380.0) flowering locus KH domain (FLK); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: positive regulation of flower development; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26000.1); Has 8156 Blast hits to 5360 proteins in 381 species: Archae - 0; Bacteria - 269; Metazoa - 3587; Fungi - 776; Plants - 1209; Viruses - 216; Other Eukaryotes - 2099 (source: NCBI BLink). & (gnl|cdd|37401 : 165.0) no description available & (reliability: 760.0) & (original description: Putative FLK, Description = Flowering locus K homology domain, PFAM = PF00013;PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'niben101scf03949_726806-733240' '(at1g33470 : 179.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G22910.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35371 : 162.0) no description available & (reliability: 358.0) & (original description: Putative Sb03g041530, Description = Putative uncharacterized protein Sb03g041530, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf03953_148970-151950' '(p49310|grp1_sinal : 136.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 130.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|35331 : 87.5) no description available & (gnl|cdd|31068 : 84.3) no description available & (reliability: 260.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf03963_73499-79788' '(at5g04600 : 231.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT3G47120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39409 : 145.0) no description available & (reliability: 462.0) & (original description: Putative nifk, Description = Ribosomal biogenesis protein Gar2, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf03978_948306-955506' '(at4g17720 : 254.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: oxidoreductase activity, nucleotide binding, nucleic acid binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G46870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 508.0) & (original description: Putative BPA1, Description = Protein vip1, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf03986_8291-12630' '(at4g17720 : 264.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: oxidoreductase activity, nucleotide binding, nucleic acid binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G46870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 528.0) & (original description: Putative BPA1, Description = Protein vip1, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf04081_1140-11841' '(at4g19610 : 725.0) nucleotide binding;nucleic acid binding;RNA binding; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition, domain 1 (InterPro:IPR003954); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G08695.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35333 : 458.0) no description available & (reliability: 1450.0) & (original description: Putative MRD1, Description = Multiple RNA-binding domain-containing protein 1, PFAM = PF00076;PF00076;PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf04099_875535-884030' '(at1g32790 : 409.0) RNA-binding protein, putative, similar to RNA-binding protein GB:CAB40027 GI:4539439 from (Arabidopsis thaliana).Member of a family of PAB2 binding domain proteins.; CTC-interacting domain 11 (CID11); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 12 (TAIR:AT4G10610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 818.0) & (original description: Putative CID11, Description = Polyadenylate-binding protein-interacting protein 11, PFAM = PF07145;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf04103_1027545-1036321' '(at4g28990 : 91.3) RNA-binding protein-related; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); Has 1307 Blast hits to 1081 proteins in 160 species: Archae - 0; Bacteria - 36; Metazoa - 556; Fungi - 137; Plants - 464; Viruses - 16; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative At4g28990, Description = TATA-binding protein-associated factor 2N, PFAM = )' T '27.4' 'RNA.RNA binding' 'niben101scf04156_41830-48636' '(at5g53060 : 596.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1). & (gnl|cdd|37401 : 218.0) no description available & (reliability: 1192.0) & (original description: Putative BnaA02g10500D, Description = BnaA02g10500D protein, PFAM = PF00013;PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'niben101scf04285_451168-455642' '(at1g14340 : 215.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: oxidoreductase activity, nucleotide binding, nucleic acid binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G01210.1); Has 332 Blast hits to 332 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 92; Plants - 229; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 430.0) & (original description: Putative PGSC0003DMG400025609, Description = RNA recognition motif containing protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf04329_549086-559882' '(at3g52660 : 432.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35340 : 362.0) no description available & (gnl|cdd|47687 : 80.7) no description available & (reliability: 864.0) & (original description: Putative At3g52660, Description = Heterogeneous nuclear ribonucleoprotein Q, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf04362_272460-280667' '(at5g04280 : 140.0) RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT1G60650.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p49310|grp1_sinal : 94.4) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|47687 : 85.3) no description available & (reliability: 280.0) & (original description: Putative RZ1B, Description = Glycine-rich RNA-binding protein RZ1B, PFAM = PF00098;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf04444_602592-606712' '(at5g55670 : 144.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G13190.1). & (reliability: 288.0) & (original description: Putative At5g55670, Description = RNA recognition motif-containing protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf04485_189874-194193' '(at4g14300 : 272.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G33410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39406 : 201.0) no description available & (gnl|cdd|31068 : 83.6) no description available & (reliability: 544.0) & (original description: Putative RNP1, Description = Heterogeneous nuclear ribonucleoprotein 1, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf04528_1111018-1117614' '(at5g54580 : 139.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G07750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative Os08g0139000, Description = Os08g0139000 protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf04582_167022-177192' '(at3g20930 : 383.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT1G32580.1); Has 19538 Blast hits to 16159 proteins in 695 species: Archae - 6; Bacteria - 989; Metazoa - 10059; Fungi - 2542; Plants - 4206; Viruses - 0; Other Eukaryotes - 1736 (source: NCBI BLink). & (gnl|cdd|47687 : 83.0) no description available & (reliability: 766.0) & (original description: Putative At3g20930, Description = Putative uncharacterized protein At3g20930, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf04632_806432-811251' '(at5g06210 : 150.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 5 (TAIR:AT1G74230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q05966|grp10_brana : 81.3) Glycine-rich RNA-binding protein 10 - Brassica napus (Rape) & (reliability: 300.0) & (original description: Putative At5g06210, Description = Putative uncharacterized protein At5g06210, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf04653_244146-251031' '(p19683|roc4_nicsy : 486.0) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (at4g24770 : 249.0) Encodes a chloroplast RNA-binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Required for editing and stability of specific chloroplast mRNAs.; 31-kDa RNA binding protein (RBP31); FUNCTIONS IN: RNA binding, poly(U) RNA binding; INVOLVED IN: RNA modification, RNA processing, innate immune response; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 31B (TAIR:AT5G50250.1); Has 997248 Blast hits to 498569 proteins in 22111 species: Archae - 21618; Bacteria - 606023; Metazoa - 186637; Fungi - 27654; Plants - 60055; Viruses - 71042; Other Eukaryotes - 24219 (source: NCBI BLink). & (gnl|cdd|35349 : 102.0) no description available & (gnl|cdd|47687 : 83.0) no description available & (reliability: 498.0) & (original description: Putative nbp1, Description = 28 kDa ribonucleoprotein, chloroplastic, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf04754_374798-383808' '(at1g29400 : 691.0) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices.; MEI2-like protein 5 (ML5); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like 3 (TAIR:AT4G18120.2); Has 6281 Blast hits to 5530 proteins in 358 species: Archae - 4; Bacteria - 106; Metazoa - 3185; Fungi - 1006; Plants - 1245; Viruses - 0; Other Eukaryotes - 735 (source: NCBI BLink). & (gnl|cdd|39859 : 351.0) no description available & (gnl|cdd|67666 : 187.0) no description available & (q27k34|pla2_orysa : 121.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (reliability: 1382.0) & (original description: Putative ML5, Description = Protein MEI2-like 5, PFAM = PF00076;PF00076;PF04059)' T '27.4' 'RNA.RNA binding' 'niben101scf04847_188225-192354' '(at5g55670 : 139.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G13190.1). & (reliability: 278.0) & (original description: Putative At5g55670, Description = RNA recognition motif-containing protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf04861_130268-149404' '(at2g21440 : 560.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 28 (TAIR:AT5G18810.1); Has 993074 Blast hits to 495169 proteins in 22089 species: Archae - 21796; Bacteria - 609929; Metazoa - 180707; Fungi - 26716; Plants - 57391; Viruses - 71662; Other Eukaryotes - 24873 (source: NCBI BLink). & (gnl|cdd|35349 : 327.0) no description available & (reliability: 1120.0) & (original description: Putative rbm28, Description = RNA-binding protein 28, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf05173_40343-48142' '(gnl|cdd|38156 : 96.6) no description available & (at4g17520 : 94.7) Hyaluronan / mRNA binding family; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Stm1, N-terminal (InterPro:IPR019084), Hyaluronan/mRNA-binding protein (InterPro:IPR006861); BEST Arabidopsis thaliana protein match is: Hyaluronan / mRNA binding family (TAIR:AT5G47210.1); Has 14577 Blast hits to 9436 proteins in 968 species: Archae - 15; Bacteria - 3155; Metazoa - 5443; Fungi - 1433; Plants - 1957; Viruses - 142; Other Eukaryotes - 2432 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative rgga, Description = Hyaluronan/mRNA-binding protein, PFAM = PF09598;PF04774)' T '27.4' 'RNA.RNA binding' 'niben101scf05306_288341-293600' '(at2g37340 : 200.0) encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks.; arginine/serine-rich zinc knuckle-containing protein 33 (RSZ33); FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT3G53500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative RS2Z34, Description = Arginine/serine-rich splicing factor RS2Z34 transcript V, PFAM = PF00098;PF00098;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf05308_55620-82208' '(gnl|cdd|35340 : 176.0) no description available & (at4g00830 : 135.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G52660.2). & (gnl|cdd|84495 : 84.5) no description available & (reliability: 270.0) & (original description: Putative Sb08g019135, Description = Putative RNA-binding protein 46-like, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf05308_65623-76931' '(gnl|cdd|35340 : 129.0) no description available & (at4g00830 : 105.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G52660.2). & (reliability: 210.0) & (original description: Putative Os12g0577001, Description = Os12g0577001 protein, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf05354_411-8115' '(at2g17975 : 273.0) zinc finger (Ran-binding) family protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT2G26695.1); Has 1281 Blast hits to 744 proteins in 145 species: Archae - 0; Bacteria - 0; Metazoa - 342; Fungi - 88; Plants - 606; Viruses - 0; Other Eukaryotes - 245 (source: NCBI BLink). & (gnl|cdd|39399 : 112.0) no description available & (reliability: 546.0) & (original description: Putative Sb06g000870, Description = Putative uncharacterized protein Sb06g000870, PFAM = PF00641;PF00641;PF00641)' T '27.4' 'RNA.RNA binding' 'niben101scf05396_694375-697634' '(at3g15010 : 266.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: leaf senescence, cell death, ethylene biosynthetic process, defense response; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G41060.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39406 : 118.0) no description available & (reliability: 532.0) & (original description: Putative UBA2A, Description = Nucleotide-binding, alpha-beta plait, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf05412_293096-304118' '(at5g01270 : 792.0) Encodes CPL2, a carboxyl-terminal domain (CTD) phosphatase that dephosphorylates CTD Ser5-PO4 of the RNA polymerase II complex. Regulates plant growth, stress and auxin responses.; carboxyl-terminal domain (ctd) phosphatase-like 2 (CPL2); FUNCTIONS IN: double-stranded RNA binding, phosphatase activity; INVOLVED IN: response to auxin stimulus, response to osmotic stress, developmental growth; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: C-terminal domain phosphatase-like 1 (TAIR:AT4G21670.1). & (gnl|cdd|35544 : 263.0) no description available & (reliability: 1584.0) & (original description: Putative CPL2, Description = RNA polymerase II C-terminal domain phosphatase-like 2, PFAM = PF00035;PF03031)' T '27.4' 'RNA.RNA binding' 'niben101scf05437_648393-654615' '(p19682|roc3_nicsy : 439.0) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (at4g24770 : 260.0) Encodes a chloroplast RNA-binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Required for editing and stability of specific chloroplast mRNAs.; 31-kDa RNA binding protein (RBP31); FUNCTIONS IN: RNA binding, poly(U) RNA binding; INVOLVED IN: RNA modification, RNA processing, innate immune response; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 31B (TAIR:AT5G50250.1); Has 997248 Blast hits to 498569 proteins in 22111 species: Archae - 21618; Bacteria - 606023; Metazoa - 186637; Fungi - 27654; Plants - 60055; Viruses - 71042; Other Eukaryotes - 24219 (source: NCBI BLink). & (gnl|cdd|35367 : 118.0) no description available & (gnl|cdd|47687 : 84.1) no description available & (reliability: 520.0) & (original description: Putative nbp1, Description = 28 kDa ribonucleoprotein, chloroplastic, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf05442_459397-463365' '(p49314|roc2_nicpl : 375.0) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at2g37220 : 249.0) Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, poly(U) RNA binding; INVOLVED IN: response to cold, response to abscisic acid stimulus, innate immune response; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 29 (TAIR:AT3G53460.3); Has 997478 Blast hits to 497195 proteins in 22066 species: Archae - 21542; Bacteria - 603238; Metazoa - 188798; Fungi - 28200; Plants - 60491; Viruses - 70820; Other Eukaryotes - 24389 (source: NCBI BLink). & (gnl|cdd|35349 : 92.8) no description available & (gnl|cdd|31068 : 83.2) no description available & (reliability: 498.0) & (original description: Putative nbp1, Description = 31 kDa ribonucleoprotein, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf05487_226935-238151' '(at3g04610 : 370.0) flowering locus KH domain (FLK); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: positive regulation of flower development; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26000.1); Has 8156 Blast hits to 5360 proteins in 381 species: Archae - 0; Bacteria - 269; Metazoa - 3587; Fungi - 776; Plants - 1209; Viruses - 216; Other Eukaryotes - 2099 (source: NCBI BLink). & (gnl|cdd|37401 : 161.0) no description available & (reliability: 740.0) & (original description: Putative flk, Description = Putative RNA binding protein, PFAM = PF00013;PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'niben101scf05516_243493-249957' '(at5g55550 : 224.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G26650.2). & (gnl|cdd|39406 : 188.0) no description available & (reliability: 448.0) & (original description: Putative MSI, Description = Putative heterogeneous nuclear ribonucleoprotein 1-like, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf05519_90434-96486' '(at2g41060 : 287.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: leaf senescence, cell death, ethylene biosynthetic process, defense response; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: UBP1-associated protein 2A (TAIR:AT3G56860.5); Has 20258 Blast hits to 14290 proteins in 711 species: Archae - 0; Bacteria - 976; Metazoa - 9998; Fungi - 2289; Plants - 4483; Viruses - 115; Other Eukaryotes - 2397 (source: NCBI BLink). & (gnl|cdd|39406 : 99.0) no description available & (reliability: 574.0) & (original description: Putative BnaC04g24810D, Description = BnaC04g24810D protein, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf05528_184405-192208' '(at5g56140 : 384.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36801 : 216.0) no description available & (gnl|cdd|29005 : 152.0) no description available & (reliability: 768.0) & (original description: Putative At5g56140, Description = KH domain-containing protein At5g56140, PFAM = PF16544)' T '27.4' 'RNA.RNA binding' 'niben101scf05553_465661-473567' '(gnl|cdd|35371 : 151.0) no description available & (at1g78260 : 137.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G22330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47687 : 83.4) no description available & (reliability: 274.0) & (original description: Putative glysoja_021766, Description = RNA-binding protein 38, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf05694_32549-37832' '(p19684|roc5_nicsy : 439.0) 33 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (at3g52380 : 269.0) chloroplast RNA-binding protein; chloroplast RNA-binding protein 33 (CP33); FUNCTIONS IN: RNA binding; LOCATED IN: thylakoid, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 31B (TAIR:AT5G50250.1); Has 514069 Blast hits to 499112 proteins in 22048 species: Archae - 10752; Bacteria - 302541; Metazoa - 101965; Fungi - 16255; Plants - 33338; Viruses - 35348; Other Eukaryotes - 13870 (source: NCBI BLink). & (gnl|cdd|35349 : 91.3) no description available & (gnl|cdd|47687 : 80.7) no description available & (reliability: 538.0) & (original description: Putative CP33, Description = 33 kDa ribonucleoprotein, chloroplastic, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf05726_121483-125305' '(at5g59950 : 96.7) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G02530.2). & (gnl|cdd|35753 : 95.9) no description available & (reliability: 193.4) & (original description: Putative aly, Description = RNA and export factor binding protein, putative, PFAM = PF00076;PF13865)' T '27.4' 'RNA.RNA binding' 'niben101scf05841_148924-171242' '(at3g62800 : 164.0) Encodes a nuclear dsRNA-binding protein that interacts specifically with DCL4. May regulate DCL4 function and thereby affect miRNA biogenesis. DRB4 interacts with the P6 viral protein from Cauliflower mosaic virus and may be a target of viral silencing suppression.; double-stranded-RNA-binding protein 4; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 3 (TAIR:AT3G26932.2); Has 937 Blast hits to 871 proteins in 285 species: Archae - 0; Bacteria - 437; Metazoa - 161; Fungi - 4; Plants - 271; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative DBR4, Description = dsRNA-binding protein 2, PFAM = PF00035;PF00035;PF00035)' T '27.4' 'RNA.RNA binding' 'niben101scf05855_365084-372683' '(at5g15270 : 109.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G14170.3); Has 5625 Blast hits to 2559 proteins in 215 species: Archae - 0; Bacteria - 48; Metazoa - 3662; Fungi - 737; Plants - 967; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37401 : 107.0) no description available & (reliability: 218.0) & (original description: Putative glysoja_001001, Description = Poly(RC)-binding protein 4, PFAM = PF00013;PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'niben101scf05929_214374-273144' '(at5g43960 : 270.0) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT3G25150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35339 : 234.0) no description available & (q08935|roc1_nicsy : 152.0) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|29630 : 111.0) no description available & (reliability: 520.0) & (original description: Putative BnaC09g17770D, Description = BnaC09g17770D protein, PFAM = PF00076;PF00076;PF00076;PF02136)' T '27.4' 'RNA.RNA binding' 'niben101scf05963_17228-20574' '(at3g26420 : 137.0) Zinc finger-containing glycine-rich RNA-binding protein. Cold-inducible. Contributes to the enhancement of freezing tolerance.; ATRZ-1A; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT5G04280.1); Has 19846 Blast hits to 11644 proteins in 926 species: Archae - 13; Bacteria - 5482; Metazoa - 6891; Fungi - 1262; Plants - 3241; Viruses - 222; Other Eukaryotes - 2735 (source: NCBI BLink). & (p49311|grp2_sinal : 107.0) Glycine-rich RNA-binding protein GRP2A - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|47687 : 82.2) no description available & (reliability: 274.0) & (original description: Putative RZ1A, Description = Glycine-rich RNA-binding protein RZ1A, PFAM = PF00098;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf06045_52306-97695' '(at1g55140 : 239.0) Ribonuclease III family protein; FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT3G13740.1); Has 289 Blast hits to 288 proteins in 138 species: Archae - 0; Bacteria - 238; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|32122 : 89.6) no description available & (reliability: 448.0) & (original description: Putative mrnC, Description = Mini-ribonuclease 3, PFAM = PF00636)' T '27.4' 'RNA.RNA binding' 'niben101scf06078_248033-256658' '(gnl|cdd|38156 : 136.0) no description available & (at5g47210 : 113.0) Hyaluronan / mRNA binding family; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Stm1, N-terminal (InterPro:IPR019084), Hyaluronan/mRNA-binding protein (InterPro:IPR006861); BEST Arabidopsis thaliana protein match is: Hyaluronan / mRNA binding family (TAIR:AT4G17520.1); Has 17408 Blast hits to 9992 proteins in 935 species: Archae - 13; Bacteria - 5069; Metazoa - 5239; Fungi - 1478; Plants - 1692; Viruses - 242; Other Eukaryotes - 3675 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative rgga, Description = Hyaluronan/mRNA-binding protein, PFAM = PF04774;PF09598)' T '27.4' 'RNA.RNA binding' 'niben101scf06105_347286-351221' '(at4g10110 : 179.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G18510.1); Has 3478 Blast hits to 3175 proteins in 382 species: Archae - 0; Bacteria - 389; Metazoa - 1438; Fungi - 566; Plants - 665; Viruses - 0; Other Eukaryotes - 420 (source: NCBI BLink). & (gnl|cdd|35353 : 108.0) no description available & (reliability: 358.0) & (original description: Putative At4g10110, Description = At4g10100, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf06203_17991-20910' '(p49310|grp1_sinal : 133.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 132.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|31068 : 86.6) no description available & (gnl|cdd|35331 : 84.8) no description available & (reliability: 264.0) & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf06240_35489-41156' '(at3g26420 : 125.0) Zinc finger-containing glycine-rich RNA-binding protein. Cold-inducible. Contributes to the enhancement of freezing tolerance.; ATRZ-1A; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT5G04280.1); Has 19846 Blast hits to 11644 proteins in 926 species: Archae - 13; Bacteria - 5482; Metazoa - 6891; Fungi - 1262; Plants - 3241; Viruses - 222; Other Eukaryotes - 2735 (source: NCBI BLink). & (p49310|grp1_sinal : 90.9) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|47687 : 81.4) no description available & (gnl|cdd|35371 : 80.9) no description available & (reliability: 250.0) & (original description: Putative RZ1A, Description = Glycine-rich RNA-binding protein RZ1A, PFAM = PF00076;PF00098)' T '27.4' 'RNA.RNA binding' 'niben101scf06249_114429-119384' '(at1g51510 : 177.0) This gene is predicted to encode a protein involved in the exon junction complex. Though there is a predicted RNA binding motif, in the Drosophila ortholog (33% identity), this motif mediates interactions with Mago and is not available for RNA binding. The Arabidopsis Y14 protein appears to be predominantly nucleolar, but there is also some evidence for its presence in the cytoplasm.; Y14; FUNCTIONS IN: protein binding, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: nucleoplasm, exon-exon junction complex, nuclear body, nucleolus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA-binding motif protein 8 (InterPro:IPR008111); BEST Arabidopsis thaliana protein match is: ortholog of human splicing factor SC35 (TAIR:AT5G64200.2); Has 11259 Blast hits to 10017 proteins in 625 species: Archae - 2; Bacteria - 976; Metazoa - 6273; Fungi - 1165; Plants - 1793; Viruses - 0; Other Eukaryotes - 1050 (source: NCBI BLink). & (gnl|cdd|35352 : 171.0) no description available & (reliability: 354.0) & (original description: Putative Y14, Description = Exon junction complex protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf06276_2803-10424' '(at3g14450 : 328.0) RNA-binding protein, putative, contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (2 copies). Contains PAM PABC binding domain.; CTC-interacting domain 9 (CID9); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 8 (TAIR:AT1G53650.2); Has 3508 Blast hits to 2820 proteins in 274 species: Archae - 0; Bacteria - 0; Metazoa - 1915; Fungi - 426; Plants - 863; Viruses - 0; Other Eukaryotes - 304 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative CID9, Description = Polyadenylate-binding protein-interacting protein 9, PFAM = PF07145;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf06291_359143-373457' '(at3g45630 : 368.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|37279 : 222.0) no description available & (gnl|cdd|34774 : 220.0) no description available & (reliability: 722.0) & (original description: Putative BnaC03g55430D, Description = BnaC03g55430D protein, PFAM = PF00076;PF14570)' T '27.4' 'RNA.RNA binding' 'niben101scf06332_219393-226531' '(at5g54580 : 138.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G07750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative At5g54580, Description = Putative uncharacterized protein At5g54580, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf06376_90662-103221' '(at1g09700 : 88.2) Encodes a nuclear dsRNA binding protein. Involved in mRNA cleavage. The mutant is characterized by shorter stature, delayed flowering, leaf hyponasty, reduced fertility, decreased rate of root growth, and an altered root gravitropic response. It also exhibits less sensitivity to auxin and cytokinin.; HYPONASTIC LEAVES 1 (HYL1); CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 2 (TAIR:AT2G28380.1); Has 992 Blast hits to 893 proteins in 320 species: Archae - 14; Bacteria - 506; Metazoa - 117; Fungi - 6; Plants - 270; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative Sb07g019380, Description = Putative uncharacterized protein Sb07g019380, PFAM = PF00035;PF00035)' T '27.4' 'RNA.RNA binding' 'niben101scf06590_76568-82801' '(at3g45630 : 265.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|34774 : 133.0) no description available & (gnl|cdd|37279 : 131.0) no description available & (reliability: 508.0) & (original description: Putative BnaC03g55430D, Description = BnaC03g55430D protein, PFAM = PF14570)' T '27.4' 'RNA.RNA binding' 'niben101scf06814_142623-146058' '(at1g80930 : 193.0) MIF4G domain-containing protein / MA3 domain-containing protein; FUNCTIONS IN: RNA binding, binding; INVOLVED IN: translation, RNA metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: Initiation factor eIF-4 gamma, MA3 (TAIR:AT1G52325.1); Has 51676 Blast hits to 28577 proteins in 1484 species: Archae - 86; Bacteria - 5039; Metazoa - 22313; Fungi - 6500; Plants - 3817; Viruses - 357; Other Eukaryotes - 13564 (source: NCBI BLink). & (gnl|cdd|37351 : 184.0) no description available & (reliability: 386.0) & (original description: Putative ncm, Description = Pre-mRNA-splicing factor cwc22, PFAM = )' T '27.4' 'RNA.RNA binding' 'niben101scf06990_154102-168028' '(at5g04430 : 333.0) Gene model AT5G04430.1 produces active protein. (BTS1S). Binds to ToMV genomic RNA and prevents viral multiplication.; binding to TOMV RNA 1L (long form) (BTR1L); CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 5613 Blast hits to 2614 proteins in 213 species: Archae - 0; Bacteria - 8; Metazoa - 3980; Fungi - 530; Plants - 787; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|37402 : 243.0) no description available & (reliability: 666.0) & (original description: Putative BTR1, Description = Protein BTR1, PFAM = PF00013;PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'niben101scf07049_178136-187318' '(at2g44710 : 488.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (gnl|cdd|35340 : 166.0) no description available & (reliability: 976.0) & (original description: Putative ws1, Description = Water-stress protein, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf07066_462722-472451' '(at2g42240 : 270.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G13700.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36670 : 168.0) no description available & (reliability: 540.0) & (original description: Putative BnaC03g23650D, Description = BnaC03g23650D protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf07152_406136-416664' '(at5g04430 : 297.0) Gene model AT5G04430.1 produces active protein. (BTS1S). Binds to ToMV genomic RNA and prevents viral multiplication.; binding to TOMV RNA 1L (long form) (BTR1L); CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 5613 Blast hits to 2614 proteins in 213 species: Archae - 0; Bacteria - 8; Metazoa - 3980; Fungi - 530; Plants - 787; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (gnl|cdd|37402 : 229.0) no description available & (reliability: 594.0) & (original description: Putative BTR1, Description = Binding to TOMV RNA 1L (Long form) protein, PFAM = PF00013;PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'niben101scf07163_257915-261803' '(at3g07810 : 374.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G47620.2); Has 54120 Blast hits to 30425 proteins in 1467 species: Archae - 38; Bacteria - 13586; Metazoa - 19029; Fungi - 4969; Plants - 7799; Viruses - 151; Other Eukaryotes - 8548 (source: NCBI BLink). & (gnl|cdd|39406 : 241.0) no description available & (q08935|roc1_nicsy : 84.7) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (reliability: 748.0) & (original description: Putative RNP, Description = HnRNP, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf07227_83409-88465' '(at2g37340 : 184.0) encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks.; arginine/serine-rich zinc knuckle-containing protein 33 (RSZ33); FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT3G53500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative RS2Z32, Description = Serine/arginine-rich splicing factor RS2Z32, PFAM = PF00098;PF00098;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf07321_107705-132022' '(at4g24270 : 776.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 140 (EMB140); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lsm interaction (InterPro:IPR008669), RNA-processing protein, HAT helix (InterPro:IPR003107), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 6638 Blast hits to 6081 proteins in 560 species: Archae - 0; Bacteria - 845; Metazoa - 2454; Fungi - 1660; Plants - 947; Viruses - 0; Other Eukaryotes - 732 (source: NCBI BLink). & (gnl|cdd|35350 : 414.0) no description available & (gnl|cdd|34710 : 92.5) no description available & (reliability: 1552.0) & (original description: Putative EMB140, Description = Protein embryo defective 140, PFAM = PF05391;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf07402_612515-618284' '(at5g37720 : 177.0) ALWAYS EARLY 4 (ALY4); FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G66260.2); Has 5809 Blast hits to 5449 proteins in 440 species: Archae - 2; Bacteria - 280; Metazoa - 2763; Fungi - 1142; Plants - 1077; Viruses - 9; Other Eukaryotes - 536 (source: NCBI BLink). & (gnl|cdd|35753 : 132.0) no description available & (reliability: 354.0) & (original description: Putative aly, Description = RNA and export factor binding protein, putative, PFAM = PF00076;PF13865)' T '27.4' 'RNA.RNA binding' 'niben101scf07578_28492-33949' '(at4g09040 : 181.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G35410.1); Has 1165 Blast hits to 1048 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 539; Fungi - 16; Plants - 571; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|35333 : 86.6) no description available & (q08935|roc1_nicsy : 82.0) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (reliability: 362.0) & (original description: Putative At4g09040, Description = At4g09040, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf07580_841287-848181' '(at2g38610 : 379.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT3G08620.1); Has 1345 Blast hits to 1344 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 813; Fungi - 157; Plants - 284; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|36801 : 208.0) no description available & (gnl|cdd|29005 : 148.0) no description available & (reliability: 742.0) & (original description: Putative how, Description = KH domain-containing protein, PFAM = PF16544;PF00013)' T '27.4' 'RNA.RNA binding' 'niben101scf07590_143731-152364' '(at1g32790 : 375.0) RNA-binding protein, putative, similar to RNA-binding protein GB:CAB40027 GI:4539439 from (Arabidopsis thaliana).Member of a family of PAB2 binding domain proteins.; CTC-interacting domain 11 (CID11); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 12 (TAIR:AT4G10610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 750.0) & (original description: Putative c18, Description = Ataxin-2, C-terminal, PFAM = PF07145;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf07682_138848-145754' '(at3g07810 : 359.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G47620.2); Has 54120 Blast hits to 30425 proteins in 1467 species: Archae - 38; Bacteria - 13586; Metazoa - 19029; Fungi - 4969; Plants - 7799; Viruses - 151; Other Eukaryotes - 8548 (source: NCBI BLink). & (gnl|cdd|39406 : 205.0) no description available & (p19682|roc3_nicsy : 82.4) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (reliability: 718.0) & (original description: Putative MSI, Description = Putative heterogeneous nuclear ribonucleoprotein 1-like, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf07704_49892-57144' '(at1g60650 : 159.0) RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT5G04280.1); Has 996832 Blast hits to 989721 proteins in 35749 species: Archae - 21265; Bacteria - 589617; Metazoa - 208621; Fungi - 26263; Plants - 58603; Viruses - 68007; Other Eukaryotes - 24456 (source: NCBI BLink). & (gnl|cdd|47687 : 89.1) no description available & (p49311|grp2_sinal : 88.2) Glycine-rich RNA-binding protein GRP2A - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 318.0) & (original description: Putative RZ1C, Description = Glycine-rich RNA-binding protein RZ1C, PFAM = PF00098;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf07713_59899-69958' '(at3g07810 : 372.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G47620.2); Has 54120 Blast hits to 30425 proteins in 1467 species: Archae - 38; Bacteria - 13586; Metazoa - 19029; Fungi - 4969; Plants - 7799; Viruses - 151; Other Eukaryotes - 8548 (source: NCBI BLink). & (gnl|cdd|39406 : 231.0) no description available & (q08935|roc1_nicsy : 80.1) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (reliability: 744.0) & (original description: Putative RNP, Description = HnRNP, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf07863_89968-93875' '(at4g35785 : 129.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: ribonucleoprotein complex, chloroplast; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G07350.1). & (gnl|cdd|47687 : 81.0) no description available & (reliability: 258.0) & (original description: Putative TRA2, Description = RNA-binding (RRM/RBD/RNP motifs) family protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf08142_2186-5547' '(at3g15010 : 295.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: leaf senescence, cell death, ethylene biosynthetic process, defense response; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G41060.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39406 : 101.0) no description available & (reliability: 590.0) & (original description: Putative UBA2A, Description = Nucleotide-binding, alpha-beta plait, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf08156_672741-676180' '(at1g33520 : 314.0) Has single homolog in Arabidopsis, also homologs in human, mouse and C. elegans; contains one G-patch domain (known to mediate RNA-protein interactions) and two KOW domains (may bind RNA and/or protein); localized to the nucleus; mutant suppresses high SA levels and constitutive disease resistance in snc1 npr1 background; required for basal resistance against Pseudomonas syringae maculicola ES4326 and R gene-mediated resistance specified by RPM1, PPS4 and RPP4;; modifier of snc1, 2 (MOS2); CONTAINS InterPro DOMAIN/s: D111/G-patch (InterPro:IPR000467), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: D111/G-patch domain-containing protein (TAIR:AT4G25020.1); Has 453 Blast hits to 441 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 209; Fungi - 80; Plants - 100; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|39516 : 233.0) no description available & (reliability: 628.0) & (original description: Putative MOS2, Description = Protein MOS2, PFAM = PF12656)' T '27.4' 'RNA.RNA binding' 'niben101scf08206_77066-83808' '(at1g32790 : 392.0) RNA-binding protein, putative, similar to RNA-binding protein GB:CAB40027 GI:4539439 from (Arabidopsis thaliana).Member of a family of PAB2 binding domain proteins.; CTC-interacting domain 11 (CID11); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 12 (TAIR:AT4G10610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 784.0) & (original description: Putative CID11, Description = Polyadenylate-binding protein-interacting protein 11, PFAM = PF00076;PF00076;PF07145)' T '27.4' 'RNA.RNA binding' 'niben101scf08357_277051-282414' '(at5g15270 : 526.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G14170.3); Has 5625 Blast hits to 2559 proteins in 215 species: Archae - 0; Bacteria - 48; Metazoa - 3662; Fungi - 737; Plants - 967; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|37401 : 295.0) no description available & (reliability: 1052.0) & (original description: Putative nabp, Description = KH domain-containing protein, PFAM = PF00013;PF00013;PF00013;PF00013)' T '27.4' 'RNA.RNA binding' 'niben101scf08368_511165-527455' '(at1g70650 : 245.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding, small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: mitochondrion, intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: MMS ZWEI homologue 2 (TAIR:AT1G70660.1). & (gnl|cdd|36114 : 201.0) no description available & (gnl|cdd|34682 : 91.9) no description available & (reliability: 490.0) & (original description: Putative spm2, Description = Ubiquitin-conjugating enzyme E2 variant 2, PFAM = PF00179)' T '27.4' 'RNA.RNA binding' 'niben101scf08459_118301-137994' '(at1g53650 : 326.0) RNA-binding protein, putative, similar to RNA-binding protein GB:AAA86641 GI:1174153 from (Arabidopsis thaliana).Contains PAB2 domain which facilitates binding to PABC proteins.; CTC-interacting domain 8 (CID8); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 9 (TAIR:AT3G14450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 652.0) & (original description: Putative c18, Description = Ataxin-2, C-terminal, PFAM = PF07145;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf08478_30128-50271' '(at3g23900 : 282.0) RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Filamin/ABP280 repeat (InterPro:IPR001298), Immunoglobulin-like fold (InterPro:IPR013783), RNA recognition motif, RNP-1 (InterPro:IPR000504), Immunoglobulin E-set (InterPro:IPR014756), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Filamin/ABP280 repeat-like (InterPro:IPR017868); BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family protein (TAIR:AT3G24255.1). & (gnl|cdd|47857 : 87.6) no description available & (reliability: 564.0) & (original description: Putative BnaA01g23470D, Description = BnaA01g23470D protein, PFAM = PF00076;PF00630)' T '27.4' 'RNA.RNA binding' 'niben101scf08691_104583-109250' '(p49313|roc1_nicpl : 343.0) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at2g37220 : 260.0) Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, poly(U) RNA binding; INVOLVED IN: response to cold, response to abscisic acid stimulus, innate immune response; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 29 (TAIR:AT3G53460.3); Has 997478 Blast hits to 497195 proteins in 22066 species: Archae - 21542; Bacteria - 603238; Metazoa - 188798; Fungi - 28200; Plants - 60491; Viruses - 70820; Other Eukaryotes - 24389 (source: NCBI BLink). & (gnl|cdd|35353 : 99.6) no description available & (gnl|cdd|47687 : 82.2) no description available & (reliability: 520.0) & (original description: Putative nbp1, Description = 31 kDa ribonucleoprotein, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf08772_365629-371975' '(at3g27700 : 528.0) zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); Has 3790 Blast hits to 2562 proteins in 343 species: Archae - 8; Bacteria - 521; Metazoa - 625; Fungi - 291; Plants - 164; Viruses - 7; Other Eukaryotes - 2174 (source: NCBI BLink). & (reliability: 1056.0) & (original description: Putative At3g27700, Description = Zinc finger CCCH domain-containing protein 41, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf08926_727882-739130' '(at2g38610 : 418.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT3G08620.1); Has 1345 Blast hits to 1344 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 813; Fungi - 157; Plants - 284; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|36801 : 214.0) no description available & (gnl|cdd|29005 : 144.0) no description available & (reliability: 820.0) & (original description: Putative qk, Description = KH domain-containing protein, PFAM = PF00013;PF16544)' T '27.4' 'RNA.RNA binding' 'niben101scf09268_154841-157649' '(q03878|grp1_dauca : 138.0) Glycine-rich RNA-binding protein - Daucus carota (Carrot) & (at2g21660 : 129.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|35371 : 87.8) no description available & (gnl|cdd|31068 : 86.6) no description available & (reliability: 258.0) & (original description: Putative CCR1, Description = Glycine-rich RNA-binding protein 8, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf09284_50339-62842' '(at3g54230 : 749.0) Encodes a splicing factor SUA (suppressor of abi3-5), homologous to the human protein RBM5. Controls alternative splicing of the developmental regulator ABI3.; suppressor of abi3-5 (SUA); FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), D111/G-patch (InterPro:IPR000467), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: ortholog of human splicing factor SC35 (TAIR:AT5G64200.2). & (gnl|cdd|35376 : 82.5) no description available & (reliability: 1498.0) & (original description: Putative SUA, Description = SUPPRESSOR OF ABI3-5, PFAM = PF01585;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf09317_98363-104652' '(gnl|cdd|38156 : 111.0) no description available & (at5g47210 : 89.0) Hyaluronan / mRNA binding family; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Stm1, N-terminal (InterPro:IPR019084), Hyaluronan/mRNA-binding protein (InterPro:IPR006861); BEST Arabidopsis thaliana protein match is: Hyaluronan / mRNA binding family (TAIR:AT4G17520.1); Has 17408 Blast hits to 9992 proteins in 935 species: Archae - 13; Bacteria - 5069; Metazoa - 5239; Fungi - 1478; Plants - 1692; Viruses - 242; Other Eukaryotes - 3675 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative rgga, Description = Hyaluronan/mRNA-binding protein, PFAM = PF04774;PF09598)' T '27.4' 'RNA.RNA binding' 'niben101scf09321_246940-253656' '(at3g13700 : 316.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G42240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36670 : 250.0) no description available & (reliability: 632.0) & (original description: Putative At3g13700, Description = RNA recognition motif-containing protein, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf09456_92564-99009' '(gnl|cdd|38156 : 110.0) no description available & (at5g47210 : 106.0) Hyaluronan / mRNA binding family; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Stm1, N-terminal (InterPro:IPR019084), Hyaluronan/mRNA-binding protein (InterPro:IPR006861); BEST Arabidopsis thaliana protein match is: Hyaluronan / mRNA binding family (TAIR:AT4G17520.1); Has 17408 Blast hits to 9992 proteins in 935 species: Archae - 13; Bacteria - 5069; Metazoa - 5239; Fungi - 1478; Plants - 1692; Viruses - 242; Other Eukaryotes - 3675 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative rgga, Description = Hyaluronan/mRNA-binding protein, PFAM = PF04774;PF09598)' T '27.4' 'RNA.RNA binding' 'niben101scf09725_22593-28541' '(at5g32450 : 311.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: oxidoreductase activity, nucleotide binding, nucleic acid binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G17720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 622.0) & (original description: Putative BPA1, Description = Binding partner of ACD11 1, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf09729_14306-18558' '(at5g55670 : 142.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G13190.1). & (reliability: 284.0) & (original description: Putative At5g55670, Description = RNA recognition motif-containing protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf09782_35636-42993' '(at4g35785 : 130.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: ribonucleoprotein complex, chloroplast; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G07350.1). & (reliability: 260.0) & (original description: Putative TRA2, Description = RNA-binding (RRM/RBD/RNP motifs) family protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf09906_285922-299544' '(at2g38610 : 389.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT3G08620.1); Has 1345 Blast hits to 1344 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 813; Fungi - 157; Plants - 284; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|36801 : 206.0) no description available & (gnl|cdd|29005 : 141.0) no description available & (reliability: 756.0) & (original description: Putative qk, Description = KH domain-containing protein, PFAM = PF16544;PF00013)' T '27.4' 'RNA.RNA binding' 'niben101scf10067_209974-213185' '(at2g41060 : 209.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: leaf senescence, cell death, ethylene biosynthetic process, defense response; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: UBP1-associated protein 2A (TAIR:AT3G56860.5); Has 20258 Blast hits to 14290 proteins in 711 species: Archae - 0; Bacteria - 976; Metazoa - 9998; Fungi - 2289; Plants - 4483; Viruses - 115; Other Eukaryotes - 2397 (source: NCBI BLink). & (gnl|cdd|39406 : 97.8) no description available & (reliability: 418.0) & (original description: Putative UBA1A, Description = Heterogeneous nuclear ribonucleoprotein D0, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf10498_65094-74846' '(at3g20890 : 235.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G66010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36579 : 215.0) no description available & (reliability: 470.0) & (original description: Putative HNRH1, Description = Heterogeneous nuclear ribonucleoprotein F, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf10616_145259-156143' '(at5g61030 : 122.0) encodes a glycine-rich RNA binding protein. Gene expression is induced by cold.; glycine-rich RNA-binding protein 3 (GR-RBP3); FUNCTIONS IN: RNA binding, copper ion binding, ATP binding; INVOLVED IN: response to cold; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 5 (TAIR:AT1G74230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47687 : 89.1) no description available & (p19683|roc4_nicsy : 85.1) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 244.0) & (original description: Putative RBG4, Description = Glycine-rich RNA-binding protein 4, mitochondrial, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf10712_97893-104047' '(at2g37340 : 180.0) encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks.; arginine/serine-rich zinc knuckle-containing protein 33 (RSZ33); FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT3G53500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative RS2Z32, Description = Serine/arginine-rich splicing factor RS2Z32, PFAM = PF00098;PF00098;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf11443_257332-260438' '(at3g15010 : 199.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: leaf senescence, cell death, ethylene biosynthetic process, defense response; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G41060.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35371 : 81.7) no description available & (reliability: 398.0) & (original description: Putative UBA2C, Description = BnaA05g14580D protein, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf11767_326894-335544' '(at3g14450 : 315.0) RNA-binding protein, putative, contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (2 copies). Contains PAM PABC binding domain.; CTC-interacting domain 9 (CID9); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 8 (TAIR:AT1G53650.2); Has 3508 Blast hits to 2820 proteins in 274 species: Archae - 0; Bacteria - 0; Metazoa - 1915; Fungi - 426; Plants - 863; Viruses - 0; Other Eukaryotes - 304 (source: NCBI BLink). & (reliability: 630.0) & (original description: Putative c18, Description = Putative uncharacterized protein c18, PFAM = PF00076;PF00076;PF07145)' T '27.4' 'RNA.RNA binding' 'niben101scf12017_645974-659983' '(at3g59980 : 258.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: tRNA binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), tRNA-binding domain (InterPro:IPR002547); BEST Arabidopsis thaliana protein match is: methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative (TAIR:AT4G13780.1); Has 5867 Blast hits to 5867 proteins in 2108 species: Archae - 266; Bacteria - 4355; Metazoa - 277; Fungi - 157; Plants - 151; Viruses - 0; Other Eukaryotes - 661 (source: NCBI BLink). & (gnl|cdd|37452 : 194.0) no description available & (gnl|cdd|48401 : 170.0) no description available & (q9zts1|sym_orysa : 142.0) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (reliability: 516.0) & (original description: Putative AIMP1, Description = Aminoacyl tRNA synthase complex-interacting multifunctional protein 1, PFAM = PF01588)' T '27.4' 'RNA.RNA binding' 'niben101scf12154_135663-159945' '(at5g59950 : 157.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G02530.2). & (gnl|cdd|35753 : 133.0) no description available & (reliability: 314.0) & (original description: Putative aly, Description = ALY protein, PFAM = PF13865;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf12560_57390-61743' '(at1g21320 : 155.0) nucleotide binding;nucleic acid binding; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G76940.1); Has 568 Blast hits to 568 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 270; Fungi - 126; Plants - 140; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative RBP2, Description = RNA-binding protein 2, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf13141_290638-299329' '(at1g21320 : 132.0) nucleotide binding;nucleic acid binding; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G76940.1); Has 568 Blast hits to 568 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 270; Fungi - 126; Plants - 140; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative c406, Description = RNA-binding protein with multiple splicing, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf13180_305907-313366' '(at1g76460 : 214.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G20880.2); Has 4261 Blast hits to 4252 proteins in 371 species: Archae - 0; Bacteria - 0; Metazoa - 1989; Fungi - 541; Plants - 1112; Viruses - 30; Other Eukaryotes - 589 (source: NCBI BLink). & (gnl|cdd|35371 : 145.0) no description available & (gnl|cdd|47687 : 80.3) no description available & (reliability: 428.0) & (original description: Putative BnaA07g32790D, Description = BnaA07g32790D protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf13929_2847-17956' '(at5g59950 : 161.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G02530.2). & (gnl|cdd|35753 : 132.0) no description available & (reliability: 322.0) & (original description: Putative aly, Description = ALY protein, PFAM = PF13865;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf14009_26877-32115' '(at5g40490 : 275.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G13224.2); Has 237026 Blast hits to 70789 proteins in 2918 species: Archae - 339; Bacteria - 59623; Metazoa - 97059; Fungi - 16957; Plants - 23804; Viruses - 2447; Other Eukaryotes - 36797 (source: NCBI BLink). & (gnl|cdd|39406 : 147.0) no description available & (p28644|roc1_spiol : 84.0) 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) & (reliability: 550.0) & (original description: Putative rbp, Description = Heterogeneous nuclear ribonucleoprotein 27C, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf14017_108484-116950' '(at1g51510 : 172.0) This gene is predicted to encode a protein involved in the exon junction complex. Though there is a predicted RNA binding motif, in the Drosophila ortholog (33% identity), this motif mediates interactions with Mago and is not available for RNA binding. The Arabidopsis Y14 protein appears to be predominantly nucleolar, but there is also some evidence for its presence in the cytoplasm.; Y14; FUNCTIONS IN: protein binding, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: nucleoplasm, exon-exon junction complex, nuclear body, nucleolus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA-binding motif protein 8 (InterPro:IPR008111); BEST Arabidopsis thaliana protein match is: ortholog of human splicing factor SC35 (TAIR:AT5G64200.2); Has 11259 Blast hits to 10017 proteins in 625 species: Archae - 2; Bacteria - 976; Metazoa - 6273; Fungi - 1165; Plants - 1793; Viruses - 0; Other Eukaryotes - 1050 (source: NCBI BLink). & (gnl|cdd|35352 : 168.0) no description available & (reliability: 344.0) & (original description: Putative tsu, Description = RNA-binding protein 8A, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf14180_144150-149887' '(at3g19090 : 265.0) RNA-binding protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: ribonucleoprotein complex, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: RNA-binding protein (TAIR:AT2G43970.1); Has 912 Blast hits to 912 proteins in 142 species: Archae - 0; Bacteria - 2; Metazoa - 538; Fungi - 65; Plants - 233; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|37066 : 247.0) no description available & (reliability: 530.0) & (original description: Putative BnaC05g33830D, Description = BnaC05g33830D protein, PFAM = PF05383;PF00076;PF07145)' T '27.4' 'RNA.RNA binding' 'niben101scf14591_15174-32777' '(at3g52660 : 442.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35340 : 365.0) no description available & (reliability: 884.0) & (original description: Putative BnaA09g33060D, Description = BnaA09g33060D protein, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf15533_111323-134423' '(at4g21670 : 1006.0) encodes a a novel transcriptional repressor harboring two double-stranded RNA-binding domains and a region homologous to the catalytic domain of RNA polymerase II C-terminal domain phosphatases found in yeast and in animals that regulate gene transcription. Protein exhibits innate phosphatase activity in vitro. Mutants exhibit hyperresponsiveness to ABA, cold, and NaCl.; C-terminal domain phosphatase-like 1 (CPL1); FUNCTIONS IN: double-stranded RNA binding, phosphatase activity, nucleotide phosphatase activity; INVOLVED IN: abscisic acid mediated signaling pathway, negative regulation of transcription, response to abiotic stimulus; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: carboxyl-terminal domain (ctd) phosphatase-like 2 (TAIR:AT5G01270.2); Has 330 Blast hits to 317 proteins in 105 species: Archae - 0; Bacteria - 31; Metazoa - 57; Fungi - 81; Plants - 112; Viruses - 1; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|35544 : 251.0) no description available & (reliability: 2012.0) & (original description: Putative CPL1, Description = RNA polymerase II C-terminal domain phosphatase-like 1, PFAM = PF00035;PF00035;PF03031)' T '27.4' 'RNA.RNA binding' 'niben101scf15694_131321-136479' '(at2g37510 : 125.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G54580.1); Has 146 Blast hits to 146 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|47687 : 80.3) no description available & (reliability: 250.0) & (original description: Putative LOC100283990, Description = RNA binding protein, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf16657_111795-121054' '(at1g17370 : 562.0) oligouridylate binding protein 1B (UBP1B); FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G14100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35370 : 197.0) no description available & (gnl|cdd|31068 : 89.7) no description available & (reliability: 1120.0) & (original description: Putative UBP1, Description = Oligouridylate-binding protein 1, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf16768_128488-132814' '(at3g13224 : 237.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G40490.1); Has 77800 Blast hits to 37058 proteins in 1622 species: Archae - 33; Bacteria - 18580; Metazoa - 32661; Fungi - 6344; Plants - 11400; Viruses - 392; Other Eukaryotes - 8390 (source: NCBI BLink). & (gnl|cdd|39406 : 147.0) no description available & (reliability: 474.0) & (original description: Putative GTBP2, Description = G-strand specific single-stranded telomere-binding protein 2, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf16833_37522-41285' '(at5g61030 : 142.0) encodes a glycine-rich RNA binding protein. Gene expression is induced by cold.; glycine-rich RNA-binding protein 3 (GR-RBP3); FUNCTIONS IN: RNA binding, copper ion binding, ATP binding; INVOLVED IN: response to cold; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 5 (TAIR:AT1G74230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p19683|roc4_nicsy : 101.0) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|47687 : 91.1) no description available & (reliability: 284.0) & (original description: Putative RBG3, Description = Glycine-rich RNA-binding protein 3, mitochondrial, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf17514_159229-168874' '(at4g00830 : 517.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G52660.2). & (gnl|cdd|35340 : 380.0) no description available & (gnl|cdd|47687 : 91.4) no description available & (reliability: 1034.0) & (original description: Putative At4g00830, Description = AT4g00830/A_TM018A10_14, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf17652_50650-60927' '(at2g43410 : 513.0) FPA is a gene that regulates flowering time in Arabidopsis via a pathway that is independent of daylength (the autonomous pathway). Mutations in FPA result in extremely delayed flowering. Double mutants with FCA have reduced fertility and single/double mutants have defects in siRNA mediated chromatin silencing.; FPA; CONTAINS InterPro DOMAIN/s: Spen paralogue and orthologue SPOC, C-terminal (InterPro:IPR012921), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT4G12640.1); Has 504799 Blast hits to 501692 proteins in 22138 species: Archae - 10949; Bacteria - 306025; Metazoa - 96089; Fungi - 13914; Plants - 29775; Viruses - 36050; Other Eukaryotes - 11997 (source: NCBI BLink). & (gnl|cdd|35345 : 90.4) no description available & (reliability: 1026.0) & (original description: Putative FPA1, Description = Flowering time control protein FPA, PFAM = PF07744;PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf17947_71646-181592' '(at1g29400 : 687.0) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices.; MEI2-like protein 5 (ML5); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like 3 (TAIR:AT4G18120.2); Has 6281 Blast hits to 5530 proteins in 358 species: Archae - 4; Bacteria - 106; Metazoa - 3185; Fungi - 1006; Plants - 1245; Viruses - 0; Other Eukaryotes - 735 (source: NCBI BLink). & (gnl|cdd|39859 : 347.0) no description available & (gnl|cdd|67666 : 190.0) no description available & (q27k34|pla2_orysa : 121.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (reliability: 1374.0) & (original description: Putative ML2, Description = Protein MEI2-like 2, PFAM = PF00076;PF00076;PF04059)' T '27.4' 'RNA.RNA binding' 'niben101scf18000_52701-59422' '(at1g17370 : 608.0) oligouridylate binding protein 1B (UBP1B); FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G14100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35370 : 193.0) no description available & (gnl|cdd|31068 : 82.8) no description available & (reliability: 1194.0) & (original description: Putative UBP1B, Description = Oligouridylate-binding protein 1B, PFAM = PF00076;PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf19133_341092-349148' '(at1g21320 : 175.0) nucleotide binding;nucleic acid binding; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G76940.1); Has 568 Blast hits to 568 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 270; Fungi - 126; Plants - 140; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative c406, Description = Putative uncharacterized protein c406, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf23355_169824-174773' '(q08935|roc1_nicsy : 345.0) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (at2g37220 : 263.0) Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, poly(U) RNA binding; INVOLVED IN: response to cold, response to abscisic acid stimulus, innate immune response; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 29 (TAIR:AT3G53460.3); Has 997478 Blast hits to 497195 proteins in 22066 species: Archae - 21542; Bacteria - 603238; Metazoa - 188798; Fungi - 28200; Plants - 60491; Viruses - 70820; Other Eukaryotes - 24389 (source: NCBI BLink). & (gnl|cdd|35353 : 102.0) no description available & (gnl|cdd|47687 : 82.6) no description available & (reliability: 526.0) & (original description: Putative nbp1, Description = 31 kDa ribonucleoprotein, PFAM = PF00076;PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf23481_17119-23673' '(at5g09880 : 164.0) Splicing factor, CC1-like; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Splicing factor, CC1-like (InterPro:IPR006509), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Splicing factor, CC1-like (TAIR:AT2G16940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35369 : 150.0) no description available & (reliability: 328.0) & (original description: Putative rbm23, Description = RNA-binding protein 39, PFAM = PF00076;PF10243)' T '27.4' 'RNA.RNA binding' 'niben101scf26315_28752-36040' '(at2g28380 : 278.0) Encodes a cytoplasmic dsRNA-binding protein.; dsRNA-binding protein 2 (DRB2); CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: dsRNA-binding protein 5 (TAIR:AT5G41070.1); Has 1035 Blast hits to 903 proteins in 271 species: Archae - 2; Bacteria - 346; Metazoa - 166; Fungi - 72; Plants - 365; Viruses - 9; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 556.0) & (original description: Putative DRB2, Description = Double-stranded RNA-binding protein 2, PFAM = PF00035;PF00035)' T '27.4' 'RNA.RNA binding' 'niben101scf28181_11978-15429' '(at1g33520 : 325.0) Has single homolog in Arabidopsis, also homologs in human, mouse and C. elegans; contains one G-patch domain (known to mediate RNA-protein interactions) and two KOW domains (may bind RNA and/or protein); localized to the nucleus; mutant suppresses high SA levels and constitutive disease resistance in snc1 npr1 background; required for basal resistance against Pseudomonas syringae maculicola ES4326 and R gene-mediated resistance specified by RPM1, PPS4 and RPP4;; modifier of snc1, 2 (MOS2); CONTAINS InterPro DOMAIN/s: D111/G-patch (InterPro:IPR000467), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: D111/G-patch domain-containing protein (TAIR:AT4G25020.1); Has 453 Blast hits to 441 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 209; Fungi - 80; Plants - 100; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|39516 : 232.0) no description available & (reliability: 650.0) & (original description: Putative MOS2, Description = Protein MOS2, PFAM = PF12656)' T '27.4' 'RNA.RNA binding' 'niben101scf32522_14156-17494' '(at4g13850 : 152.0) Encodes a glycine-rich RNA-binding protein. Gene expression is induced by cold.; GLYCINE-RICH RNA-BINDING PROTEIN 2 (ATGRP2); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding, copper ion binding, ATP binding; INVOLVED IN: response to cold, seed germination, response to osmotic stress; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 4 (TAIR:AT3G23830.2); Has 139 Blast hits to 139 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q03878|grp1_dauca : 95.9) Glycine-rich RNA-binding protein - Daucus carota (Carrot) & (gnl|cdd|47687 : 88.4) no description available & (gnl|cdd|35371 : 82.1) no description available & (reliability: 304.0) & (original description: Putative RBG4, Description = Glycine-rich RNA-binding protein 4, mitochondrial, PFAM = PF00076)' T '27.4' 'RNA.RNA binding' 'niben101scf34790_7964-17006' '(gnl|cdd|38156 : 114.0) no description available & (at4g16830 : 100.0) Hyaluronan / mRNA binding family; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hyaluronan/mRNA-binding protein (InterPro:IPR006861); BEST Arabidopsis thaliana protein match is: Hyaluronan / mRNA binding family (TAIR:AT4G17520.1); Has 21958 Blast hits to 10880 proteins in 1019 species: Archae - 12; Bacteria - 7276; Metazoa - 6848; Fungi - 1552; Plants - 2999; Viruses - 314; Other Eukaryotes - 2957 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative rgga, Description = Hyaluronan/mRNA-binding protein, PFAM = PF04774;PF09598)' T '27.4' 'RNA.RNA binding' 'niben101scf34874_16250-21994' '(at5g51410 : 359.0) LUC7 N_terminus domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LUC7 related (InterPro:IPR004882); BEST Arabidopsis thaliana protein match is: LUC7 related protein (TAIR:AT3G03340.1). & (gnl|cdd|66842 : 216.0) no description available & (gnl|cdd|36015 : 188.0) no description available & (reliability: 718.0) & (original description: Putative sato3, Description = Salt tolerance protein 3, PFAM = PF03194)' T '27.4' 'RNA.RNA binding' 'niben101scf35572_107768-112256' '(at5g55550 : 220.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G26650.2). & (gnl|cdd|39406 : 195.0) no description available & (reliability: 440.0) & (original description: Putative msi1, Description = Putative heterogeneous nuclear ribonucleoprotein 1-like, PFAM = PF00076;PF00076)' T '27.1001' 'RNA' 'monomethylphosphate' 'RNA (actually small nuclear RNA)' M '28' 'DNA' '' '' '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold129_159316-163036' '(gnl|cdd|36151 : 412.0) no description available & (at5g62410 : 411.0) SMC2-1 (SMC2); structural maintenance of chromosomes 2 (SMC2); FUNCTIONS IN: transporter activity; INVOLVED IN: chromosome organization; LOCATED IN: condensin complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: Structural maintenance of chromosomes (SMC) family protein (TAIR:AT3G47460.1); Has 126046 Blast hits to 65003 proteins in 3391 species: Archae - 1784; Bacteria - 23628; Metazoa - 52968; Fungi - 10094; Plants - 6737; Viruses - 431; Other Eukaryotes - 30404 (source: NCBI BLink). & (gnl|cdd|73032 : 195.0) no description available & (reliability: 822.0) & (original description: Putative SMC2, Description = SMC2, PFAM = PF02463)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold1709_74028-91144' '(at5g57160 : 441.0) Encodes the Arabidopsis orthologue of the yeast and mammalian DNA ligase IV. Involved in the repair of DNA damage but, unlike in yeast, not required for T-DNA integration. Interacts with the Arabidopsis homologue of XRCC4.; ATLIG4; FUNCTIONS IN: protein binding, DNA ligase (ATP) activity; INVOLVED IN: double-strand break repair, response to X-ray, response to DNA damage stimulus; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059), ATP-dependent DNA ligase (InterPro:IPR000977), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 7656 Blast hits to 6618 proteins in 1076 species: Archae - 317; Bacteria - 1869; Metazoa - 2250; Fungi - 907; Plants - 304; Viruses - 214; Other Eukaryotes - 1795 (source: NCBI BLink). & (q7x7e9|dnl4_orysa : 334.0) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (gnl|cdd|36184 : 238.0) no description available & (reliability: 882.0) & (original description: Putative LIG4, Description = DNA ligase, PFAM = PF04679)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold2237_49484-58373' '(at5g35910 : 400.0) Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain (TAIR:AT1G54440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37417 : 214.0) no description available & (gnl|cdd|30697 : 93.8) no description available & (reliability: 800.0) & (original description: Putative srm, Description = Exosome component 10, PFAM = PF01612;PF00570)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold3008_39737-56122' '(at1g65780 : 726.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G65810.1); Has 5699 Blast hits to 4991 proteins in 919 species: Archae - 198; Bacteria - 1488; Metazoa - 1292; Fungi - 1154; Plants - 656; Viruses - 49; Other Eukaryotes - 862 (source: NCBI BLink). & (gnl|cdd|37012 : 453.0) no description available & (gnl|cdd|31309 : 157.0) no description available & (reliability: 1452.0) & (original description: Putative At4g05540, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF13087;PF02891;PF13086)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold4869_45905-48295' '(gnl|cdd|28928 : 108.0) no description available & (gnl|cdd|35555 : 105.0) no description available & (at2g47330 : 92.4) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G20920.1); Has 46798 Blast hits to 46047 proteins in 3085 species: Archae - 817; Bacteria - 24489; Metazoa - 6167; Fungi - 4661; Plants - 2616; Viruses - 11; Other Eukaryotes - 8037 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative mahe, Description = ATP-dependent RNA helicase p62, PFAM = PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold5229_50516-58141' '(at1g48650 : 164.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Double-stranded RNA-binding (InterPro:IPR001159), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G01130.1); Has 12982 Blast hits to 8882 proteins in 1499 species: Archae - 14; Bacteria - 5361; Metazoa - 2913; Fungi - 1651; Plants - 997; Viruses - 50; Other Eukaryotes - 1996 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative F23H14, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold7046_1342-16506' '(at3g18630 : 404.0) Encodes a uracil-DNA glycosylase (UDG) involved in a base excision DNA repair pathway in mitochondria.; uracil dna glycosylase (UNG); FUNCTIONS IN: uracil DNA N-glycosylase activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Uracil-DNA glycosylase (InterPro:IPR002043), Uracil-DNA glycosylase-like (InterPro:IPR005122); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10550.1); Has 5606 Blast hits to 5606 proteins in 2219 species: Archae - 2; Bacteria - 4117; Metazoa - 124; Fungi - 141; Plants - 47; Viruses - 234; Other Eukaryotes - 941 (source: NCBI BLink). & (gnl|cdd|81482 : 353.0) no description available & (gnl|cdd|38205 : 341.0) no description available & (reliability: 808.0) & (original description: Putative UNG, Description = Uracil-DNA glycosylase, mitochondrial, PFAM = PF03167)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold9903_20860-47925' '(at3g06980 : 573.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RH39 (TAIR:AT4G09730.1); Has 36871 Blast hits to 36254 proteins in 2997 species: Archae - 517; Bacteria - 17572; Metazoa - 5953; Fungi - 4324; Plants - 2343; Viruses - 14; Other Eukaryotes - 6148 (source: NCBI BLink). & (gnl|cdd|35552 : 305.0) no description available & (gnl|cdd|30859 : 258.0) no description available & (p46942|db10_nicsy : 114.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1146.0) & (original description: Putative Os03g0108600, Description = DEAD-box ATP-dependent RNA helicase 50, PFAM = PF00270;PF00271)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold10715_33902-37915' '(at1g01370 : 81.6) Encodes a centromere-identifying protein histone H3 variant. Localized at centromeres in both mitotic and meiotic cells.; HTR12; FUNCTIONS IN: DNA binding; INVOLVED IN: double fertilization forming a zygote and endosperm; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: male-gamete-specific histone H3 (TAIR:AT1G19890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative H3, Description = Histone H3, PFAM = PF00125)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold12119_5296-13817' '(at1g67630 : 704.0) DNA polymerase alpha 2 (POLA2); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase alpha, subunit B N-terminal (InterPro:IPR013627), DNA polymerase alpha, subunit B (InterPro:IPR016722), DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 415 Blast hits to 412 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 140; Plants - 46; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|36838 : 437.0) no description available & (gnl|cdd|34811 : 212.0) no description available & (reliability: 1408.0) & (original description: Putative POLA2, Description = DNA polymerase alpha subunit B, PFAM = PF04042;PF08418)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold12742_12259-42048' '(at2g28290 : 1130.0) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (gnl|cdd|35607 : 849.0) no description available & (q7g8y3|isw2_orysa : 347.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|84584 : 338.0) no description available & (reliability: 2260.0) & (original description: Putative snf21, Description = Chromatin structure-remodeling complex subunit snf21, PFAM = PF00271;PF14619;PF00176)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold12742_16781-20518' '(at2g28290 : 94.0) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative CHR3, Description = ATP-dependent helicase SYD, PFAM = PF14619)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold14555_17988-40663' '(at4g00660 : 651.0) RNAhelicase-like 8 (RH8); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: viral reproduction, virus-host interaction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G45810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35547 : 611.0) no description available & (gnl|cdd|30859 : 287.0) no description available & (p35683|if4a_orysa : 212.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (reliability: 1302.0) & (original description: Putative ddx6, Description = ATP-dependent RNA helicase DHH1, PFAM = PF00271;PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold14555_20103-32165' '(at4g00660 : 811.0) RNAhelicase-like 8 (RH8); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: viral reproduction, virus-host interaction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G45810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35547 : 777.0) no description available & (gnl|cdd|30859 : 365.0) no description available & (p35683|if4a_orysa : 287.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (reliability: 1622.0) & (original description: Putative ste13, Description = Putative ATP-dependent RNA helicase ste13, PFAM = PF00271;PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold14844_24529-30794' '(at1g08260 : 719.0) Similar to POL2A, DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal, partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells.; TILTED 1 (TIL1); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: positive regulation of S phase of mitotic cell cycle, negative regulation of long-day photoperiodism, flowering, embryo development ending in seed dormancy; LOCATED IN: apoplast, epsilon DNA polymerase complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), Domain of unknown function DUF1744 (InterPro:IPR013697), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134); BEST Arabidopsis thaliana protein match is: DNA polymerase epsilon catalytic subunit (TAIR:AT2G27120.1); Has 2011 Blast hits to 1700 proteins in 652 species: Archae - 331; Bacteria - 603; Metazoa - 305; Fungi - 291; Plants - 83; Viruses - 58; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|37009 : 704.0) no description available & (gnl|cdd|30766 : 154.0) no description available & (reliability: 1438.0) & (original description: Putative nimP, Description = DNA polymerase, PFAM = PF00136)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold14886_37303-40080' '(at2g35920 : 120.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G04895.1); Has 15667 Blast hits to 10761 proteins in 1709 species: Archae - 0; Bacteria - 5024; Metazoa - 4470; Fungi - 1848; Plants - 1329; Viruses - 777; Other Eukaryotes - 2219 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative At2g35920, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold17095_13363-19881' '(at3g53110 : 533.0) Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4); FUNCTIONS IN: RNA helicase activity, RNA-dependent ATPase activity, ATP-dependent helicase activity; INVOLVED IN: poly(A)+ mRNA export from nucleus, response to cold, response to heat, response to abscisic acid stimulus; LOCATED IN: nuclear envelope, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1); Has 40925 Blast hits to 40635 proteins in 3033 species: Archae - 702; Bacteria - 21081; Metazoa - 5720; Fungi - 4311; Plants - 2419; Viruses - 28; Other Eukaryotes - 6664 (source: NCBI BLink). & (gnl|cdd|35553 : 439.0) no description available & (gnl|cdd|30859 : 257.0) no description available & (p41380|if4a3_nicpl : 199.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1066.0) & (original description: Putative helC, Description = LOS4, PFAM = PF00271;PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold17149_29991-39363' '(o48901|dpod1_soybn : 721.0) DNA polymerase delta catalytic subunit (EC 2.7.7.7) - Glycine max (Soybean) & (at5g63960 : 701.0) EMBRYO DEFECTIVE 2780 (EMB2780); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: DNA replication, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B, pol2 (InterPro:IPR004578); BEST Arabidopsis thaliana protein match is: recovery protein 3 (TAIR:AT1G67500.2). & (gnl|cdd|36187 : 564.0) no description available & (gnl|cdd|86240 : 283.0) no description available & (reliability: 1402.0) & (original description: Putative polD, Description = DNA polymerase, PFAM = PF03104)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold17445_33235-41645' '(at5g44800 : 431.0) chromatin remodeling 4 (CHR4); FUNCTIONS IN: in 6 functions; INVOLVED IN: chromatin assembly or disassembly, regulation of transcription; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Homeodomain-related (InterPro:IPR012287), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 35726 Blast hits to 27895 proteins in 2283 species: Archae - 135; Bacteria - 6476; Metazoa - 12546; Fungi - 6155; Plants - 3074; Viruses - 328; Other Eukaryotes - 7012 (source: NCBI BLink). & (reliability: 862.0) & (original description: Putative LOC100383315, Description = Chromodomain-helicase-DNA-binding protein 5, PFAM = PF06465)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold20156_1547-6301' '(at1g08130 : 318.0) Encodes the Arabidopsis DNA ligase 1 that provides the major DNA ligase activity in cells and plays a key role in both DNA replication and excision repair pathways. Indispensable for cell viability. AtLIG1 expresses one major and two minor mRNA transcripts differing only in the length of the 5' untranslated leader sequences preceding a common ORF. Translation from the first in-frame start codon produces an AtLIG1 isoform that is targeted exclusively to the mitochondria. Translation initiation from the second in-frame start codon produces an AtLIG1 isoform targeted only to the nucleus.; DNA ligase 1 (LIG1); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, DNA replication, DNA recombination; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: ATP-dependent DNA ligase (TAIR:AT1G49250.1); Has 3556 Blast hits to 3521 proteins in 879 species: Archae - 298; Bacteria - 1538; Metazoa - 375; Fungi - 434; Plants - 112; Viruses - 159; Other Eukaryotes - 640 (source: NCBI BLink). & (gnl|cdd|36185 : 317.0) no description available & (gnl|cdd|80824 : 202.0) no description available & (reliability: 636.0) & (original description: Putative lig1, Description = DNA ligase, PFAM = PF04679)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold23003_15-6608' '(at2g05210 : 198.0) Encodes AtPOT1a, an accessory factor for telomerase required for positive telomere length regulation. Note on nomenclature: different names have been given to Arabidopsis POT-like genes (Kuchar and Fajkus, 2004; Shakirov et al, 2005; Tani and Murata, 2005). According to a unifying nomenclature (Surovtseva et al, 2007), At2g05210 (previously named AtPOT1) is designated AtPOT1a, while At5g06310 (previously named AtPOT2) is designated AtPOT1b.; Protection of Telomeres 1a (AtPOT1a); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Telomere end binding protein (InterPro:IPR011564); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT5G06310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72969 : 112.0) no description available & (gnl|cdd|39954 : 109.0) no description available & (reliability: 396.0) & (original description: Putative PGSC0003DMG400021171, Description = Protection of telomeres 1 protein, PFAM = PF02765)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold23603_9765-16971' '(at1g34380 : 329.0) 5'-3' exonuclease family protein; FUNCTIONS IN: 5'-3' exonuclease activity, DNA binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 5'-3' exonuclease, SAM-fold domain (InterPro:IPR020047), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), 5'-3' exonuclease, N-terminal resolvase-like domain (InterPro:IPR020046); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT3G52050.5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|28892 : 149.0) no description available & (reliability: 658.0) & (original description: Putative KK1_009244, Description = 5'-3' exonuclease, PFAM = PF02739;PF01367)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold23736_6204-10182' '(at5g65630 : 265.0) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE7 show some resistance to agrobacterium-mediated root transformation.; global transcription factor group E7 (GTE7); CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: global transcription factor group E2 (TAIR:AT5G10550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36687 : 205.0) no description available & (gnl|cdd|47625 : 99.6) no description available & (reliability: 508.0) & (original description: Putative GTE7, Description = Transcription factor GTE7, PFAM = PF00439;PF17035)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold27151_3574-9344' '(at3g55060 : 490.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39300.2); Has 61765 Blast hits to 33720 proteins in 2065 species: Archae - 846; Bacteria - 6964; Metazoa - 31967; Fungi - 5247; Plants - 3104; Viruses - 205; Other Eukaryotes - 13432 (source: NCBI BLink). & (reliability: 980.0) & (original description: Putative BnaC06g15600D, Description = BnaC06g15600D protein, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold27521_17696-26621' '(at4g32700 : 507.0) Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development.; helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding; FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of gene expression, DNA replication, DNA recombination, photomorphogenesis; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA/RNA helicase, C-terminal (InterPro:IPR001650), DNA polymerase A domain (InterPro:IPR002298), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1); Has 17628 Blast hits to 16579 proteins in 2941 species: Archae - 600; Bacteria - 7507; Metazoa - 1254; Fungi - 1190; Plants - 590; Viruses - 412; Other Eukaryotes - 6075 (source: NCBI BLink). & (gnl|cdd|31092 : 222.0) no description available & (reliability: 1014.0) & (original description: Putative TEB, Description = DNA polymerase theta, PFAM = PF00476)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold28236_15446-23847' '(at1g10520 : 454.0) DNA polymerase lambda (POLL); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity, catalytic activity, nucleotidyltransferase activity; INVOLVED IN: DNA repair, DNA replication; LOCATED IN: intracellular; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), DNA-directed DNA polymerase, family X, beta-like (InterPro:IPR002008), DNA-directed DNA polymerase, family X, beta-like, N-terminal (InterPro:IPR010996), DNA polymerase lambda, fingers domain (InterPro:IPR018944), DNA polymerase family X, binding site (InterPro:IPR019843), DNA-directed DNA polymerase X (InterPro:IPR002054), BRCT (InterPro:IPR001357), DNA polymerase X (InterPro:IPR022312); Has 1887 Blast hits to 1879 proteins in 557 species: Archae - 50; Bacteria - 688; Metazoa - 533; Fungi - 209; Plants - 50; Viruses - 7; Other Eukaryotes - 350 (source: NCBI BLink). & (gnl|cdd|47789 : 209.0) no description available & (gnl|cdd|37745 : 175.0) no description available & (reliability: 908.0) & (original description: Putative polb, Description = DNA polymerase lambda, PFAM = PF00533;PF14792;PF14716;PF10391)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold29326_11620-38959' '(at2g01130 : 1517.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G48650.2); Has 13137 Blast hits to 8990 proteins in 1526 species: Archae - 10; Bacteria - 5358; Metazoa - 2929; Fungi - 1766; Plants - 978; Viruses - 93; Other Eukaryotes - 2003 (source: NCBI BLink). & (gnl|cdd|36138 : 953.0) no description available & (gnl|cdd|31829 : 474.0) no description available & (reliability: 3034.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF07717;PF00035;PF00271;PF00270;PF04408)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold29326_11862-23285' '(at2g01130 : 1185.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G48650.2); Has 13137 Blast hits to 8990 proteins in 1526 species: Archae - 10; Bacteria - 5358; Metazoa - 2929; Fungi - 1766; Plants - 978; Viruses - 93; Other Eukaryotes - 2003 (source: NCBI BLink). & (gnl|cdd|36138 : 855.0) no description available & (gnl|cdd|31829 : 457.0) no description available & (reliability: 2370.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF00271;PF00270;PF04408;PF07717)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold29609_711-18192' '(at1g67320 : 638.0) DNA primase, large subunit family; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication, synthesis of RNA primer; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA primase, large subunit, eukaryotic (InterPro:IPR016558), DNA primase, large subunit, eukaryotic/archaeal (InterPro:IPR007238). & (gnl|cdd|37478 : 371.0) no description available & (gnl|cdd|86545 : 223.0) no description available & (reliability: 1276.0) & (original description: Putative prim2, Description = DNA primase large subunit, PFAM = PF04104)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold29832_2708-24601' '(at2g13370 : 1927.0) chromatin remodeling 5 (CHR5); FUNCTIONS IN: chromatin binding, helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 38529 Blast hits to 28045 proteins in 2467 species: Archae - 189; Bacteria - 9973; Metazoa - 8887; Fungi - 6205; Plants - 2508; Viruses - 447; Other Eukaryotes - 10320 (source: NCBI BLink). & (gnl|cdd|35605 : 1089.0) no description available & (q7g8y3|isw2_orysa : 436.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|30899 : 307.0) no description available & (reliability: 3854.0) & (original description: Putative chd1, Description = Chromodomain-helicase-DNA-binding protein 1, PFAM = PF00385;PF00176;PF00271;PF13907)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold30981_5220-8088' '(at5g01290 : 184.0) mRNA capping enzyme family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, protein tyrosine/serine/threonine phosphatase activity, mRNA guanylyltransferase activity, polynucleotide 5'-phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, mRNA processing, mRNA capping, dephosphorylation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme, C-terminal (InterPro:IPR013846); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT3G09100.2); Has 888 Blast hits to 860 proteins in 246 species: Archae - 0; Bacteria - 2; Metazoa - 276; Fungi - 241; Plants - 79; Viruses - 71; Other Eukaryotes - 219 (source: NCBI BLink). & (gnl|cdd|37597 : 160.0) no description available & (reliability: 362.0) & (original description: Putative pco130460, Description = mRNA-capping enzyme, PFAM = PF00782)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold35076_8679-22022' '(at5g06310 : 238.0) Encodes AtPOT1b. Note on nomenclature: different names have been given to Arabidopsis POT-like genes (Kuchar and Fajkus, 2004; Shakirov et al, 2005; Tani and Murata, 2005). According to a unifying nomenclature (Surovtseva et al, 2007), At2g05210 (previously named AtPOT1) is designated AtPOT1a, while At5g06310 (previously named AtPOT2) is designated AtPOT1b.; protection of telomeres 1b (AtPOT1b); FUNCTIONS IN: DNA binding; INVOLVED IN: telomere maintenance; LOCATED IN: nuclear chromosome, telomeric region; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Telomere end binding protein (InterPro:IPR011564); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G05210.3); Has 198 Blast hits to 197 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 0; Plants - 83; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|39954 : 135.0) no description available & (gnl|cdd|72969 : 106.0) no description available & (reliability: 430.0) & (original description: Putative PGSC0003DMG400021171, Description = Protection of telomeres 1 protein, PFAM = PF16686;PF02765)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold35732_2236-8387' '(at5g32440 : 204.0) Ubiquitin system component Cue protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1). & (reliability: 408.0) & (original description: Putative Os06g0642900, Description = Os06g0642900 protein, PFAM = PF02845)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold38137_523-8766' '(at5g32440 : 204.0) Ubiquitin system component Cue protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1). & (reliability: 408.0) & (original description: Putative PGSC0003DMG400028628, Description = Ubiquitin system component Cue protein, putative, PFAM = PF02845)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold38179_12903-18092' '(at5g08020 : 835.0) Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair.; RPA70-kDa subunit B (RPA70B); FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: DNA repair, response to UV-B, DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Replication factor-a protein 1 Rpa1 (InterPro:IPR004591), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication factor A, C-terminal (InterPro:IPR013955), Replication factor-A protein 1, N-terminal (InterPro:IPR007199); BEST Arabidopsis thaliana protein match is: Replication factor-A protein 1-related (TAIR:AT5G61000.1); Has 1056 Blast hits to 1045 proteins in 226 species: Archae - 10; Bacteria - 0; Metazoa - 213; Fungi - 147; Plants - 535; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|72071 : 171.0) no description available & (reliability: 1670.0) & (original description: Putative RPA1B, Description = Replication protein A 70 kDa DNA-binding subunit B, PFAM = PF16900;PF04057;PF01336;PF08646)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold38771_1-18345' '(at5g63920 : 193.0) Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates.; topoisomerase 3alpha (TOP3A); FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase type I activity, DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: in 7 processes; LOCATED IN: chromosome; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA topoisomerase, type IA, zn finger (InterPro:IPR013498), DNA topoisomerase, type IA, core (InterPro:IPR000380), DNA topoisomerase, type IA, domain 2 (InterPro:IPR003601), DNA topoisomerase, type IA, DNA-binding (InterPro:IPR003602), DNA topoisomerase, type IA, central (InterPro:IPR013497), Zinc finger, GRF-type (InterPro:IPR010666), DNA topoisomerase, type IA, central region, subdomain 3 (InterPro:IPR013826), Toprim domain, subgroup (InterPro:IPR006154), DNA topoisomerase, type IA, central region, subdomain 1 (InterPro:IPR013824), Toprim domain (InterPro:IPR006171), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: DNA topoisomerase, type IA, core (TAIR:AT2G32000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37167 : 92.0) no description available & (reliability: 386.0) & (original description: Putative TOP3A, Description = DNA topoisomerase, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold39408_10859-17433' '(at5g17690 : 188.0) Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state.; TERMINAL FLOWER 2 (TFL2); CONTAINS InterPro DOMAIN/s: Chromo domain subgroup (InterPro:IPR017984), Chromo domain-like (InterPro:IPR016197), Chromo shadow, subgroup (InterPro:IPR018125), Chromo domain (InterPro:IPR000953); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q339w7|lhp1_orysa : 169.0) Probable protein LIKE HETEROCHROMATIN PROTEIN1 (LHP1) - Oryza sativa (Rice) & (reliability: 376.0) & (original description: Putative LHP1, Description = Chromo domain protein LHP1, PFAM = PF00385)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold42425_13036-16889' '(at3g18950 : 497.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G49450.1); Has 30107 Blast hits to 16274 proteins in 601 species: Archae - 20; Bacteria - 4381; Metazoa - 11289; Fungi - 6965; Plants - 3765; Viruses - 0; Other Eukaryotes - 3687 (source: NCBI BLink). & (gnl|cdd|29257 : 139.0) no description available & (gnl|cdd|35495 : 84.7) no description available & (reliability: 994.0) & (original description: Putative wdrp, Description = F-box and wd40 domain protein, putative, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold43593_11987-17675' '(at4g26110 : 392.0) Encodes a member of a small gene family of proteins with similarity to nucleosome assembly proteins.May function in nucleotide excision repair. Loss of function mutations have no obvious visible phenotypes but do seem to affect transcription of NER related genes.; nucleosome assembly protein1;1 (NAP1;1); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA repair, nucleosome assembly; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: nucleosome assembly protein 1;3 (TAIR:AT5G56950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36720 : 303.0) no description available & (gnl|cdd|85149 : 269.0) no description available & (reliability: 784.0) & (original description: Putative NAP1, Description = Nucleosome assembly protein 1, PFAM = PF00956)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold44037_1-8769' '(at1g18800 : 283.0) Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP1. Bind histones Histone2A and Histone2B and associate with chromatin in vivo.; NAP1-related protein 2 (NRP2); FUNCTIONS IN: chromatin binding, histone binding, DNA binding; INVOLVED IN: cell proliferation, cell differentiation, nucleosome assembly, lateral root formation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: NAP1-related protein 1 (TAIR:AT1G74560.2); Has 4380 Blast hits to 3595 proteins in 373 species: Archae - 7; Bacteria - 141; Metazoa - 1827; Fungi - 714; Plants - 336; Viruses - 93; Other Eukaryotes - 1262 (source: NCBI BLink). & (gnl|cdd|36721 : 154.0) no description available & (gnl|cdd|85149 : 141.0) no description available & (reliability: 566.0) & (original description: Putative NRP2, Description = NAP1-related protein 2, PFAM = PF00956;PF00956)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold46655_1-5695' '(at1g18800 : 222.0) Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP1. Bind histones Histone2A and Histone2B and associate with chromatin in vivo.; NAP1-related protein 2 (NRP2); FUNCTIONS IN: chromatin binding, histone binding, DNA binding; INVOLVED IN: cell proliferation, cell differentiation, nucleosome assembly, lateral root formation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: NAP1-related protein 1 (TAIR:AT1G74560.2); Has 4380 Blast hits to 3595 proteins in 373 species: Archae - 7; Bacteria - 141; Metazoa - 1827; Fungi - 714; Plants - 336; Viruses - 93; Other Eukaryotes - 1262 (source: NCBI BLink). & (gnl|cdd|36721 : 148.0) no description available & (gnl|cdd|85149 : 142.0) no description available & (reliability: 444.0) & (original description: Putative nrp, Description = Protein SET, PFAM = PF00956)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold50129_10123-15131' '(at5g23120 : 212.0) encodes a stability and/or assembly factor of photosystem II; HIGH CHLOROPHYLL FLUORESCENCE 136 (HCF136); INVOLVED IN: response to cadmium ion, plastid organization, protein complex assembly; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BNR repeat (InterPro:IPR002860), Photosystem II stability/assembly factor, HCF136 (InterPro:IPR016705), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5z5a8|p2saf_orysa : 209.0) Photosystem II stability/assembly factor HCF136, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|34127 : 95.1) no description available & (reliability: 406.0) & (original description: Putative ycf48, Description = Ycf48-like protein, PFAM = PF14870)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold50680_3167-10814' '(at1g18800 : 275.0) Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP1. Bind histones Histone2A and Histone2B and associate with chromatin in vivo.; NAP1-related protein 2 (NRP2); FUNCTIONS IN: chromatin binding, histone binding, DNA binding; INVOLVED IN: cell proliferation, cell differentiation, nucleosome assembly, lateral root formation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: NAP1-related protein 1 (TAIR:AT1G74560.2); Has 4380 Blast hits to 3595 proteins in 373 species: Archae - 7; Bacteria - 141; Metazoa - 1827; Fungi - 714; Plants - 336; Viruses - 93; Other Eukaryotes - 1262 (source: NCBI BLink). & (gnl|cdd|36721 : 179.0) no description available & (gnl|cdd|85149 : 140.0) no description available & (reliability: 550.0) & (original description: Putative nrp, Description = Protein SET, PFAM = PF00956;PF00956)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold51991_620-6164' '(at5g35910 : 361.0) Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain (TAIR:AT1G54440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37417 : 226.0) no description available & (gnl|cdd|85567 : 89.9) no description available & (reliability: 722.0) & (original description: Putative EXOSX, Description = Exosome component 10, PFAM = PF01612;PF08066)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold55085_530-13363' '(at1g31360 : 402.0) Encodes a (d)NTP-dependent 3'->5' DNA helicase. This protein can also disrupt D loop structures and may mediate branch migration of Holliday junctions when tested in vitro. The unwinding activity of the enzyme depends on the presence of divalent cations (Mg2+, Mn2+, or Ca2+, but not Zn2+).(d)NTPs are also required with ATP and dATP supporting the greatest amount of DNA unwinding in vitro.; RECQ helicase L2 (RECQL2); CONTAINS InterPro DOMAIN/s: RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: DNA helicase (RECQl4A) (TAIR:AT1G10930.1); Has 27972 Blast hits to 27909 proteins in 2839 species: Archae - 320; Bacteria - 17784; Metazoa - 2771; Fungi - 1804; Plants - 1361; Viruses - 12; Other Eukaryotes - 3920 (source: NCBI BLink). & (gnl|cdd|35574 : 183.0) no description available & (gnl|cdd|30860 : 169.0) no description available & (reliability: 804.0) & (original description: Putative RECQ1, Description = RECQ1, PFAM = PF09382;PF00271;PF00570;PF16124)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold56763_8296-12888' '(at5g57160 : 189.0) Encodes the Arabidopsis orthologue of the yeast and mammalian DNA ligase IV. Involved in the repair of DNA damage but, unlike in yeast, not required for T-DNA integration. Interacts with the Arabidopsis homologue of XRCC4.; ATLIG4; FUNCTIONS IN: protein binding, DNA ligase (ATP) activity; INVOLVED IN: double-strand break repair, response to X-ray, response to DNA damage stimulus; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059), ATP-dependent DNA ligase (InterPro:IPR000977), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 7656 Blast hits to 6618 proteins in 1076 species: Archae - 317; Bacteria - 1869; Metazoa - 2250; Fungi - 907; Plants - 304; Viruses - 214; Other Eukaryotes - 1795 (source: NCBI BLink). & (gnl|cdd|36184 : 164.0) no description available & (q7x7e9|dnl4_orysa : 143.0) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (reliability: 378.0) & (original description: Putative LIG4, Description = DNA ligase, PFAM = PF04675)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold58100_35-8613' '(at3g23890 : 1571.0) Encodes a topoisomerase II that is highly expressed in young seedlings. The protein is localized in the nucleus and gene expression levels are increased in proliferative tissues.; topoisomerase II (TOPII); CONTAINS InterPro DOMAIN/s: DNA topoisomerase, type IIA, subunit A/C-terminal (InterPro:IPR002205), DNA topoisomerase, type IIA, conserved site (InterPro:IPR018522), DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta (InterPro:IPR013758), DNA topoisomerase, type IIA, subunit B, domain 2 (InterPro:IPR013506), DNA topoisomerase, type IIA, subunit A, alpha-helical (InterPro:IPR013757), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA topoisomerase, type IIA, subunit B/N-terminal, alpha-beta (InterPro:IPR013759), DNA topoisomerase, type IIA, subunit B/N-terminal (InterPro:IPR001241), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA topoisomerase II, eukaryotic-type (InterPro:IPR001154), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), DNA topoisomerase, type IIA, central (InterPro:IPR013760); BEST Arabidopsis thaliana protein match is: DNA GYRASE B2 (TAIR:AT5G04130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o24308|top2_pea : 1523.0) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II) (PsTopII) - Pisum sativum (Garden pea) & (gnl|cdd|35576 : 1047.0) no description available & (gnl|cdd|47740 : 636.0) no description available & (reliability: 3142.0) & (original description: Putative TOP2, Description = DNA topoisomerase 2, PFAM = PF16898;PF02518;PF01751;PF00204;PF00521)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold63421_295-6236' '(at1g05900 : 248.0) endonuclease III 2 (NTH2); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Helix-hairpin-helix DNA-binding motif, class 1 (InterPro:IPR003583), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), Endonuclease III, conserved site-2 (InterPro:IPR004036), Helix-hairpin-helix motif (InterPro:IPR000445), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT2G31450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37132 : 236.0) no description available & (gnl|cdd|30526 : 142.0) no description available & (reliability: 496.0) & (original description: Putative nth1, Description = Bifunctional DNA N-glycoslyase/DNA-(apurinic or apyrimidinic site) lyase, PFAM = PF00730;PF00633)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold71266_8833-14221' '(at2g32010 : 811.0) Encodes an inositol polyphosphate 5í-phosphatase (5PTase). Mediating phosphoinositide signaling. Involved in establishment of foliar vein patterns.; CVP2 like 1 (CVL1); FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: leaf vascular tissue pattern formation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G05470.1). & (gnl|cdd|35786 : 233.0) no description available & (gnl|cdd|47467 : 199.0) no description available & (reliability: 1622.0) & (original description: Putative IP5P6, Description = Type IV inositol polyphosphate 5-phosphatase 6, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold74304_2797-8333' '(at5g32440 : 207.0) Ubiquitin system component Cue protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1). & (reliability: 414.0) & (original description: Putative At5g32440, Description = Ubiquitin system component Cue protein, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold76139_1-6382' '(at3g13170 : 465.0) Encodes AtSPO11-1, one of the three Arabidopsis homologues of the archaeal DNA topoisomerase VIA subunit (topo VIA). Required for meiotic recombination. AtSPO11-1 and AtSPO11-2 have overlapping functions (i.e. both required for meiotic recombination) whereas AtSPO11-3 functions in DNA replication. AtSPO11-1 accumulates in foci in early G2. At 1 h post-S phase, no foci are observed, but by 3 h a majority (80%) of meiocytes at this time point contain >50 foci. However, by 5 h, AtSPO11-1 foci are no longer detectable. This suggests that the protein undergoes a rapid cycle of accumulation and disappearance in meiocytes over a period of between 1 and 5 h post-S phase.; ATSPO11-1; CONTAINS InterPro DOMAIN/s: Spo11/DNA topoisomerase VI, subunit A, N-terminal (InterPro:IPR013049), Meiotic recombination, Spo11 (InterPro:IPR013048), Spo11/DNA topoisomerase VI, subunit A (InterPro:IPR002815); BEST Arabidopsis thaliana protein match is: Spo11/DNA topoisomerase VI, subunit A protein (TAIR:AT5G02820.1); Has 908 Blast hits to 908 proteins in 313 species: Archae - 216; Bacteria - 16; Metazoa - 170; Fungi - 122; Plants - 151; Viruses - 0; Other Eukaryotes - 233 (source: NCBI BLink). & (gnl|cdd|38006 : 351.0) no description available & (gnl|cdd|31883 : 215.0) no description available & (reliability: 930.0) & (original description: Putative TOP6A, Description = Meiotic recombination protein SPO11-1, PFAM = PF04406)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold81472_1-6211' '(at1g70070 : 412.0) Allelic to ISE2(increased size exclusion limit of plasmodesmata 2). Mutants maintain dilated plasmodesmata at the embryonic torpedo stage.; EMBRYO DEFECTIVE 25 (EMB25); FUNCTIONS IN: RNA helicase activity, ATP-dependent helicase activity; INVOLVED IN: posttranscriptional gene silencing, plasmodesmata-mediated intercellular transport, embryo development ending in seed dormancy; LOCATED IN: stress granule, chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT3G46960.1); Has 21396 Blast hits to 12786 proteins in 1473 species: Archae - 1027; Bacteria - 4600; Metazoa - 5457; Fungi - 2724; Plants - 1158; Viruses - 307; Other Eukaryotes - 6123 (source: NCBI BLink). & (gnl|cdd|36165 : 331.0) no description available & (gnl|cdd|34219 : 245.0) no description available & (reliability: 824.0) & (original description: Putative helY, Description = Superfamily II RNA helicase, PFAM = PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold89048_1139-8335' '(at3g06400 : 558.0) Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature.; chromatin-remodeling protein 11 (CHR11); FUNCTIONS IN: in 7 functions; INVOLVED IN: cell growth, embryo sac development; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), SLIDE (InterPro:IPR015195), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2). & (q7g8y3|isw2_orysa : 538.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35606 : 377.0) no description available & (gnl|cdd|84584 : 254.0) no description available & (reliability: 1058.0) & (original description: Putative isw, Description = ISWI chromatin-remodeling complex ATPase ISW2, PFAM = PF13892;PF00176)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.3scaffold107736_1-3061' '(gnl|cdd|30860 : 184.0) no description available & (gnl|cdd|35572 : 164.0) no description available & (at5g27680 : 134.0) DNA helicase; RECQ helicase SIM (RECQSIM); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RECQ helicase L2 (TAIR:AT1G31360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative recQ, Description = ATP-dependent DNA helicase RecQ, PFAM = PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold5_439567-468689' '(at2g35920 : 1428.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G04895.1); Has 15667 Blast hits to 10761 proteins in 1709 species: Archae - 0; Bacteria - 5024; Metazoa - 4470; Fungi - 1848; Plants - 1329; Viruses - 777; Other Eukaryotes - 2219 (source: NCBI BLink). & (gnl|cdd|36138 : 997.0) no description available & (gnl|cdd|31829 : 513.0) no description available & (reliability: 2856.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF04408;PF00270;PF07717;PF00271)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold8_1983916-1994901' '(at1g05630 : 1477.0) Encodes an inositol polyphosphate 5-phosphatase with phosphatase activity toward only Ins(1,4,5)P3. Induced in response to ABA and wounding treatments. Expressed in young seedlings and flowers, while no transcripts were detectable in maturated roots, stems, and rosette leaves Modulates the development of cotyledon veins through its regulation of auxin homeostasis. Involved in blue light lightñstimulated increase in cytosolic calcium ion.; 5PTASE13; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: endonuclease/exonuclease/phosphatase family protein (TAIR:AT2G31830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34970 : 143.0) no description available & (gnl|cdd|35786 : 125.0) no description available & (reliability: 2942.0) & (original description: Putative IP5P12, Description = Type I inositol polyphosphate 5-phosphatase 12, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold68_868618-883764' '(at1g65810 : 301.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: egg cell, seed; EXPRESSED DURING: E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G65780.1). & (gnl|cdd|37012 : 159.0) no description available & (reliability: 602.0) & (original description: Putative PGSC0003DMG400037817, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF13086)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold76_740730-757880' '(at5g63920 : 774.0) Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates.; topoisomerase 3alpha (TOP3A); FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase type I activity, DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: in 7 processes; LOCATED IN: chromosome; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA topoisomerase, type IA, zn finger (InterPro:IPR013498), DNA topoisomerase, type IA, core (InterPro:IPR000380), DNA topoisomerase, type IA, domain 2 (InterPro:IPR003601), DNA topoisomerase, type IA, DNA-binding (InterPro:IPR003602), DNA topoisomerase, type IA, central (InterPro:IPR013497), Zinc finger, GRF-type (InterPro:IPR010666), DNA topoisomerase, type IA, central region, subdomain 3 (InterPro:IPR013826), Toprim domain, subgroup (InterPro:IPR006154), DNA topoisomerase, type IA, central region, subdomain 1 (InterPro:IPR013824), Toprim domain (InterPro:IPR006171), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: DNA topoisomerase, type IA, core (TAIR:AT2G32000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37167 : 653.0) no description available & (gnl|cdd|30896 : 294.0) no description available & (reliability: 1548.0) & (original description: Putative top3, Description = DNA topoisomerase, PFAM = PF01751;PF01131)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold99_99440-121146' '(at2g42120 : 716.0) DNA polymerase delta small subunit (POLD2); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9lre5|dpod2_orysa : 640.0) DNA polymerase delta small subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (gnl|cdd|37943 : 500.0) no description available & (gnl|cdd|67651 : 177.0) no description available & (reliability: 1432.0) & (original description: Putative POLD2, Description = DNA polymerase delta small subunit, PFAM = PF04042)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold103_177605-193606' '(at5g44750 : 965.0) Homologous to Y-family DNA polymerases, contains BRCT domain. Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS).; REV1; FUNCTIONS IN: DNA-directed DNA polymerase activity; INVOLVED IN: DNA repair, response to UV-B, response to DNA damage stimulus; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, Y-family, little finger domain (InterPro:IPR017961), DNA-repair protein, UmuC-like (InterPro:IPR001126), DNA-repair protein, UmuC-like, N-terminal (InterPro:IPR017963), DNA repair protein, Rev1 (InterPro:IPR012112), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: DNA/RNA polymerases superfamily protein (TAIR:AT1G49980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|48487 : 528.0) no description available & (gnl|cdd|37304 : 479.0) no description available & (reliability: 1930.0) & (original description: Putative REV1, Description = DNA repair protein REV1, PFAM = PF11799;PF00817;PF16589)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold111_1146819-1153584' '(at4g00660 : 734.0) RNAhelicase-like 8 (RH8); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: viral reproduction, virus-host interaction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G45810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35547 : 702.0) no description available & (gnl|cdd|30859 : 355.0) no description available & (p35683|if4a_orysa : 279.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (reliability: 1468.0) & (original description: Putative ddx6, Description = Probable ATP-dependent RNA helicase ddx6, PFAM = PF00270;PF00271)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold112_156372-170369' '(at5g35910 : 703.0) Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain (TAIR:AT1G54440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37417 : 399.0) no description available & (gnl|cdd|85567 : 136.0) no description available & (reliability: 1406.0) & (original description: Putative RRP6L2, Description = Protein RRP6-like 2, PFAM = PF08066;PF01612;PF00570)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold373_537815-548885' '(at5g06310 : 315.0) Encodes AtPOT1b. Note on nomenclature: different names have been given to Arabidopsis POT-like genes (Kuchar and Fajkus, 2004; Shakirov et al, 2005; Tani and Murata, 2005). According to a unifying nomenclature (Surovtseva et al, 2007), At2g05210 (previously named AtPOT1) is designated AtPOT1a, while At5g06310 (previously named AtPOT2) is designated AtPOT1b.; protection of telomeres 1b (AtPOT1b); FUNCTIONS IN: DNA binding; INVOLVED IN: telomere maintenance; LOCATED IN: nuclear chromosome, telomeric region; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Telomere end binding protein (InterPro:IPR011564); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G05210.3); Has 198 Blast hits to 197 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 0; Plants - 83; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|39954 : 174.0) no description available & (gnl|cdd|72969 : 114.0) no description available & (reliability: 600.0) & (original description: Putative POT1B, Description = Protection of telomeres protein 1b, PFAM = PF02765)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold446_130975-137737' '(at3g47490 : 229.0) HNH endonuclease; FUNCTIONS IN: endonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HNH endonuclease (InterPro:IPR002711); BEST Arabidopsis thaliana protein match is: HNH endonuclease domain-containing protein (TAIR:AT1G18680.1). & (reliability: 458.0) & (original description: Putative At3g47490, Description = HNH endonuclease, PFAM = PF01844)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold561_492265-497859' '(at2g19480 : 345.0) This gene is predicted to encode a nucleosome assembly protein. Plant lines expressing an RNAi construct directed against this gene show a reduction in agrobacterium-mediated root transformation.; nucleosome assembly protein 1;2 (NAP1;2); CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: nucleosome assembly protein 1;3 (TAIR:AT5G56950.1). & (gnl|cdd|36720 : 281.0) no description available & (gnl|cdd|85149 : 251.0) no description available & (reliability: 690.0) & (original description: Putative NAP1, Description = Nucleosome assembly protein 1, PFAM = PF00956)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold567_182527-199933' '(at5g44800 : 1313.0) chromatin remodeling 4 (CHR4); FUNCTIONS IN: in 6 functions; INVOLVED IN: chromatin assembly or disassembly, regulation of transcription; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Homeodomain-related (InterPro:IPR012287), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 35726 Blast hits to 27895 proteins in 2283 species: Archae - 135; Bacteria - 6476; Metazoa - 12546; Fungi - 6155; Plants - 3074; Viruses - 328; Other Eukaryotes - 7012 (source: NCBI BLink). & (gnl|cdd|35605 : 604.0) no description available & (q7g8y3|isw2_orysa : 346.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|30899 : 306.0) no description available & (reliability: 2626.0) & (original description: Putative chd4, Description = CHD3-type chromatin-remodeling factor PICKLE, PFAM = PF00176;PF06465;PF00628;PF00271;PF00385;PF00385)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold584_211646-238605' '(at5g04130 : 649.0) DNA GYRASE B2; FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, ATP binding; INVOLVED IN: DNA topological change, DNA metabolic process; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA topoisomerase, type IIA, subunit B, domain 2 (InterPro:IPR013506), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA topoisomerase, type IIA, subunit B (InterPro:IPR000565), DNA topoisomerase, type IIA, subunit B/N-terminal (InterPro:IPR001241); BEST Arabidopsis thaliana protein match is: DNA GYRASE B1 (TAIR:AT3G10270.1); Has 25944 Blast hits to 25881 proteins in 6578 species: Archae - 105; Bacteria - 19082; Metazoa - 171; Fungi - 228; Plants - 112; Viruses - 77; Other Eukaryotes - 6169 (source: NCBI BLink). & (q5nbj3|gyrb_orysa : 615.0) DNA gyrase subunit B, chloroplast/mitochondrial precursor (EC 5.99.1.3) - Oryza sativa (Rice) & (gnl|cdd|81676 : 606.0) no description available & (gnl|cdd|35576 : 360.0) no description available & (reliability: 1298.0) & (original description: Putative gyrB, Description = DNA gyrase subunit B, PFAM = PF00204;PF02518)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold584_614123-642714' '(at2g13840 : 481.0) Polymerase/histidinol phosphatase-like; FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity, catalytic activity; INVOLVED IN: DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polymerase/histidinol phosphatase-like (InterPro:IPR016195), Polymerase/histidinol phosphatase, N-terminal (InterPro:IPR003141), PHP, C-terminal (InterPro:IPR004013); Has 4358 Blast hits to 4353 proteins in 1589 species: Archae - 140; Bacteria - 3576; Metazoa - 0; Fungi - 2; Plants - 36; Viruses - 0; Other Eukaryotes - 604 (source: NCBI BLink). & (gnl|cdd|30958 : 147.0) no description available & (reliability: 962.0) & (original description: Putative BnaA03g38520D, Description = BnaA03g38520D protein, PFAM = PF02811)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold646_24224-72235' '(q9lre6|dpod1_orysa : 998.0) DNA polymerase delta catalytic subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (at5g63960 : 965.0) EMBRYO DEFECTIVE 2780 (EMB2780); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: DNA replication, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B, pol2 (InterPro:IPR004578); BEST Arabidopsis thaliana protein match is: recovery protein 3 (TAIR:AT1G67500.2). & (gnl|cdd|36187 : 944.0) no description available & (gnl|cdd|84550 : 448.0) no description available & (reliability: 1930.0) & (original description: Putative DPD1, Description = DNA polymerase, PFAM = PF14260;PF00136)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold922_452957-464262' '(at5g58720 : 303.0) smr (Small MutS Related) domain-containing protein; FUNCTIONS IN: damaged DNA binding, ATP binding; INVOLVED IN: mismatch repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Smr protein/MutS2 C-terminal (InterPro:IPR002625), Domain of unknown function DUF1771 (InterPro:IPR013899); BEST Arabidopsis thaliana protein match is: silencing defective 5 (TAIR:AT3G15390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 606.0) & (original description: Putative Zm.2642, Description = , PFAM = PF08590;PF01713)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold963_522988-525854' '(at1g51080 : 165.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; Has 101 Blast hits to 98 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 10; Plants - 27; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 330.0) & (original description: Putative PGSC0003DMG400018255, Description = At1g51080, PFAM = PF12843)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold970_64194-66328' '(at1g20960 : 357.0) embryo defective 1507 (emb1507); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1). & (gnl|cdd|36169 : 309.0) no description available & (gnl|cdd|31397 : 147.0) no description available & (reliability: 714.0) & (original description: Putative brr2, Description = U5 small nuclear ribonucleoprotein 200 kDa helicase, PFAM = PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold1155_192273-204632' '(at1g21690 : 564.0) embryo defective 1968 (EMB1968); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: DNA replication factor C complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), Replication factor C (InterPro:IPR013748); BEST Arabidopsis thaliana protein match is: replication factor C 2 (TAIR:AT1G63160.1). & (gnl|cdd|36207 : 369.0) no description available & (gnl|cdd|80670 : 314.0) no description available & (reliability: 1128.0) & (original description: Putative RFC2, Description = Replication factor C subunit 2, PFAM = PF00004;PF08542)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold1190_357577-375797' '(at5g22010 : 863.0) replication factor C1 (RFC1); FUNCTIONS IN: DNA clamp loader activity, nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: DNA replication; LOCATED IN: DNA replication factor C complex, intracellular; CONTAINS InterPro DOMAIN/s: DNA replication factor RFC1, C-terminal (InterPro:IPR013725), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), DNA replication factor C, large subunit (InterPro:IPR012178), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G04730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37179 : 263.0) no description available & (gnl|cdd|81320 : 199.0) no description available & (reliability: 1726.0) & (original description: Putative RFC1, Description = Replication factor C subunit 1, PFAM = PF08519;PF00004;PF00533)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold1399_28260-36852' '(at5g26680 : 610.0) 5'-3' exonuclease family protein; FUNCTIONS IN: 5'-3' exonuclease activity, DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: XPG conserved site (InterPro:IPR019974), XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, N-terminal (InterPro:IPR002421), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G29630.2); Has 3563 Blast hits to 3243 proteins in 839 species: Archae - 284; Bacteria - 855; Metazoa - 643; Fungi - 727; Plants - 266; Viruses - 42; Other Eukaryotes - 746 (source: NCBI BLink). & (q9sxq6|fen1a_orysa : 590.0) Flap endonuclease 1a (EC 3.1.-.-) (OsFEN-1a) - Oryza sativa (Rice) & (gnl|cdd|37730 : 442.0) no description available & (gnl|cdd|29030 : 397.0) no description available & (reliability: 1220.0) & (original description: Putative FEN1, Description = Flap endonuclease 1, PFAM = PF00867;PF00752)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold1448_200636-223437' '(at2g13370 : 1949.0) chromatin remodeling 5 (CHR5); FUNCTIONS IN: chromatin binding, helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 38529 Blast hits to 28045 proteins in 2467 species: Archae - 189; Bacteria - 9973; Metazoa - 8887; Fungi - 6205; Plants - 2508; Viruses - 447; Other Eukaryotes - 10320 (source: NCBI BLink). & (gnl|cdd|35605 : 1105.0) no description available & (q7g8y3|isw2_orysa : 431.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|30899 : 308.0) no description available & (reliability: 3898.0) & (original description: Putative CHR5, Description = Protein CHROMATIN REMODELING 5, PFAM = PF13907;PF00385;PF00271;PF00176)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold1884_160517-172406' '(at4g00660 : 622.0) RNAhelicase-like 8 (RH8); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: viral reproduction, virus-host interaction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G45810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35547 : 598.0) no description available & (gnl|cdd|30859 : 291.0) no description available & (p41378|if4a_wheat : 209.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Triticum aestivum (Wheat) & (reliability: 1244.0) & (original description: Putative ddx6, Description = ATP-dependent RNA helicase DHH1, PFAM = PF00270;PF00271)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold2304_21668-34257' '(at3g06400 : 1640.0) Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature.; chromatin-remodeling protein 11 (CHR11); FUNCTIONS IN: in 7 functions; INVOLVED IN: cell growth, embryo sac development; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), SLIDE (InterPro:IPR015195), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2). & (q7g8y3|isw2_orysa : 1592.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35606 : 1088.0) no description available & (gnl|cdd|84584 : 338.0) no description available & (reliability: 3200.0) & (original description: Putative CHR11, Description = ISWI chromatin-remodeling complex ATPase CHR11, PFAM = PF09111;PF09110;PF00176;PF00271)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold2477_39117-55925' '(at5g16270 : 329.0) Encodes a SCC1/REC8 ortholog that may be involved in mitosis and may represent a mitotic cohesin.; sister chromatid cohesion 1 protein 4 (SYN4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: sister chromatid cohesion; LOCATED IN: nuclear chromosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rad21/Rec8 like protein, C-terminal (InterPro:IPR006909), Rad21/Rec8 like protein, N-terminal (InterPro:IPR006910); BEST Arabidopsis thaliana protein match is: Rad21/Rec8-like family protein (TAIR:AT3G59550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36427 : 207.0) no description available & (gnl|cdd|68400 : 153.0) no description available & (reliability: 658.0) & (original description: Putative rec8, Description = Double-strand-break repair protein rad21-like protein, PFAM = PF04825;PF04824)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold2591_201547-207235' '(at4g26110 : 387.0) Encodes a member of a small gene family of proteins with similarity to nucleosome assembly proteins.May function in nucleotide excision repair. Loss of function mutations have no obvious visible phenotypes but do seem to affect transcription of NER related genes.; nucleosome assembly protein1;1 (NAP1;1); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA repair, nucleosome assembly; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: nucleosome assembly protein 1;3 (TAIR:AT5G56950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36720 : 318.0) no description available & (gnl|cdd|85149 : 277.0) no description available & (reliability: 774.0) & (original description: Putative NAP1, Description = Nucleosome assembly protein 1, PFAM = PF00956)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold2970_181643-195634' '(at1g65810 : 660.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: egg cell, seed; EXPRESSED DURING: E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G65780.1). & (gnl|cdd|37012 : 418.0) no description available & (gnl|cdd|31309 : 164.0) no description available & (reliability: 1320.0) & (original description: Putative At5g37140, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF13087;PF00580;PF13086)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold3073_103282-118578' '(gnl|cdd|35552 : 355.0) no description available & (gnl|cdd|30859 : 342.0) no description available & (at1g55150 : 273.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 234.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 520.0) & (original description: Putative P68, Description = DEAD box protein P68, PFAM = PF00271;PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold3349_295269-362836' '(at1g18800 : 257.0) Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP1. Bind histones Histone2A and Histone2B and associate with chromatin in vivo.; NAP1-related protein 2 (NRP2); FUNCTIONS IN: chromatin binding, histone binding, DNA binding; INVOLVED IN: cell proliferation, cell differentiation, nucleosome assembly, lateral root formation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: NAP1-related protein 1 (TAIR:AT1G74560.2); Has 4380 Blast hits to 3595 proteins in 373 species: Archae - 7; Bacteria - 141; Metazoa - 1827; Fungi - 714; Plants - 336; Viruses - 93; Other Eukaryotes - 1262 (source: NCBI BLink). & (gnl|cdd|36721 : 170.0) no description available & (gnl|cdd|85149 : 132.0) no description available & (reliability: 514.0) & (original description: Putative nrp, Description = Protein SET, PFAM = PF00956)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold3370_16264-23470' '(at1g34380 : 402.0) 5'-3' exonuclease family protein; FUNCTIONS IN: 5'-3' exonuclease activity, DNA binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 5'-3' exonuclease, SAM-fold domain (InterPro:IPR020047), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), 5'-3' exonuclease, N-terminal resolvase-like domain (InterPro:IPR020046); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT3G52050.5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|28892 : 159.0) no description available & (reliability: 804.0) & (original description: Putative BnaC06g08260D, Description = BnaC06g08260D protein, PFAM = PF02739;PF01367)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold3379_156029-174831' '(at4g36050 : 578.0) endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: zinc ion binding, nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), Exodeoxyribonuclease III xth (InterPro:IPR004808), Zinc finger, GRF-type (InterPro:IPR010666); BEST Arabidopsis thaliana protein match is: apurinic endonuclease-redox protein (TAIR:AT2G41460.1); Has 8559 Blast hits to 7505 proteins in 2283 species: Archae - 114; Bacteria - 4844; Metazoa - 586; Fungi - 501; Plants - 129; Viruses - 2; Other Eukaryotes - 2383 (source: NCBI BLink). & (gnl|cdd|31052 : 170.0) no description available & (gnl|cdd|36508 : 92.0) no description available & (reliability: 1156.0) & (original description: Putative APE2, Description = DNA-(apurinic or apyrimidinic site) lyase 2, PFAM = PF06839;PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold3398_1-7402' '(at2g26280 : 466.0) smr (Small MutS Related) domain-containing protein mRNA, complete cds; CID7; FUNCTIONS IN: damaged DNA binding, protein binding, ATP binding; INVOLVED IN: mismatch repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Smr protein/MutS2 C-terminal (InterPro:IPR002625), Region of unknown function DUF1771 (InterPro:IPR013899); BEST Arabidopsis thaliana protein match is: PRLI-interacting factor, putative (TAIR:AT5G58720.1); Has 309 Blast hits to 309 proteins in 103 species: Archae - 0; Bacteria - 0; Metazoa - 71; Fungi - 126; Plants - 79; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 932.0) & (original description: Putative glysoja_039984, Description = NEDD4-binding protein 2, PFAM = PF08590)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold3474_112738-137898' '(at1g08840 : 1212.0) embryo defective 2411 (emb2411); FUNCTIONS IN: ATP-dependent DNA helicase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD/REP type (InterPro:IPR000212), DNA replication factor Dna2 (InterPro:IPR014808); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1). & (gnl|cdd|37016 : 784.0) no description available & (gnl|cdd|72120 : 196.0) no description available & (reliability: 2424.0) & (original description: Putative emb2411, Description = DNA2-like helicase, PFAM = PF13087;PF08696;PF13086;PF13086)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold3598_58860-236510' '(gnl|cdd|30860 : 343.0) no description available & (gnl|cdd|35572 : 261.0) no description available & (at1g60930 : 201.0) AtRECQ4B mutant showed no sensitivity to DNA damaging agents.Involved in homologous recombination.; RECQ helicase L4B (RECQ4B); FUNCTIONS IN: in 8 functions; INVOLVED IN: DNA recombination; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), HRDC-like (InterPro:IPR010997), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: DNA helicase (RECQl4A) (TAIR:AT1G10930.1); Has 28171 Blast hits to 28052 proteins in 2731 species: Archae - 327; Bacteria - 17551; Metazoa - 2839; Fungi - 1949; Plants - 1368; Viruses - 5; Other Eukaryotes - 4132 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative Sb02g043160, Description = Putative uncharacterized protein Sb02g043160, PFAM = PF16124;PF00271;PF09382;PF14493;PF00570)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold4020_18344-60705' '(at1g58060 : 1402.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G58050.1); Has 14563 Blast hits to 8989 proteins in 1532 species: Archae - 4; Bacteria - 6119; Metazoa - 3212; Fungi - 1916; Plants - 1040; Viruses - 151; Other Eukaryotes - 2121 (source: NCBI BLink). & (gnl|cdd|36138 : 784.0) no description available & (gnl|cdd|31829 : 270.0) no description available & (reliability: 2804.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX57, PFAM = PF00270;PF04408;PF00271)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold4086_63465-72407' '(at5g37030 : 511.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Helicase domain, viral-like (InterPro:IPR000606); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G37150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37012 : 319.0) no description available & (gnl|cdd|31309 : 151.0) no description available & (reliability: 1022.0) & (original description: Putative At5g37030, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF13086;PF13086;PF13087)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold4128_101597-116439' '(at2g42120 : 711.0) DNA polymerase delta small subunit (POLD2); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9lre5|dpod2_orysa : 636.0) DNA polymerase delta small subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (gnl|cdd|37943 : 482.0) no description available & (gnl|cdd|67651 : 175.0) no description available & (reliability: 1422.0) & (original description: Putative cdc1, Description = DNA polymerase delta subunit 2, PFAM = PF04042)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold4381_79176-99612' '(at3g10690 : 1219.0) DNA GYRASE A (GYRA); FUNCTIONS IN: DNA topoisomerase activity, catalytic activity, ATP binding; INVOLVED IN: DNA topological change, DNA metabolic process; LOCATED IN: mitochondrion, chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA gyrase, subunit A (InterPro:IPR005743), DNA topoisomerase, type IIA, subunit A/C-terminal (InterPro:IPR002205), DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta (InterPro:IPR013758), DNA topoisomerase, type IIA, subunit A, alpha-helical (InterPro:IPR013757), DNA topoisomerase, type IIA, central (InterPro:IPR013760), DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel (InterPro:IPR006691); BEST Arabidopsis thaliana protein match is: topoisomerase II (TAIR:AT3G23890.1); Has 22353 Blast hits to 21396 proteins in 3265 species: Archae - 84; Bacteria - 12907; Metazoa - 182; Fungi - 204; Plants - 111; Viruses - 99; Other Eukaryotes - 8766 (source: NCBI BLink). & (q7xzf7|gyra_orysa : 1171.0) Probable DNA gyrase subunit A, chloroplast/mitochondrial precursor (EC 5.99.1.3) - Oryza sativa (Rice) & (gnl|cdd|81634 : 1016.0) no description available & (gnl|cdd|35576 : 436.0) no description available & (reliability: 2438.0) & (original description: Putative GYRA, Description = DNA gyrase subunit A, chloroplastic/mitochondrial, PFAM = PF03989;PF03989;PF03989;PF03989;PF03989;PF03989;PF00521)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold4669_92618-126877' '(at2g28290 : 1134.0) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (gnl|cdd|35607 : 846.0) no description available & (q7g8y3|isw2_orysa : 348.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|30899 : 340.0) no description available & (reliability: 2268.0) & (original description: Putative snf21, Description = Chromatin structure-remodeling complex subunit snf21, PFAM = PF14619;PF00176;PF00271)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold4669_97129-100828' '(at2g28290 : 114.0) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative CHR3, Description = Chromatin structure-remodeling complex subunit snf21, PFAM = PF14619)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold4669_97724-114702' '(at2g28290 : 117.0) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative CHR3, Description = Chromatin structure-remodeling complex subunit snf21, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold4842_158819-172127' '(at1g65580 : 1357.0) FRAGILE FIBER3 (FRA3); FUNCTIONS IN: inositol or phosphatidylinositol phosphatase activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Endonuclease/exonuclease/phosphatase family protein (TAIR:AT2G43900.1); Has 2602 Blast hits to 2499 proteins in 289 species: Archae - 0; Bacteria - 180; Metazoa - 887; Fungi - 607; Plants - 609; Viruses - 0; Other Eukaryotes - 319 (source: NCBI BLink). & (gnl|cdd|35786 : 236.0) no description available & (gnl|cdd|47467 : 225.0) no description available & (reliability: 2714.0) & (original description: Putative IP5P15, Description = Type II inositol polyphosphate 5-phosphatase 15, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold5110_34412-83617' '(at2g36490 : 302.0) A repressor of transcriptional gene silencing. Functions by demethylating the target promoter DNA. Interacts physically with RPA2/ROR1. In the ros1 mutants, an increase in methylation is observed in a number of gene promoters. Among the loci affected by ros1, a few (RD29A and At1g76930) are affected in cytosine methylation in all sequence contexts (CpG, CpNpG or CpNpN), although many others are affected primarily in non-CpG contexts.; demeter-like 1 (DML1); FUNCTIONS IN: protein binding, DNA N-glycosylase activity, DNA-(apurinic or apyrimidinic site) lyase activity; INVOLVED IN: DNA repair, chromatin silencing, negative regulation of chromatin silencing, DNA methylation, DNA demethylation; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: HhH-GPD base excision DNA repair family protein (TAIR:AT5G04560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30526 : 99.5) no description available & (reliability: 598.0) & (original description: Putative Dem1, Description = DNA demethylase 1, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold5372_10266-71156' '(at1g35530 : 878.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: in 6 functions; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36020.1). & (gnl|cdd|31308 : 431.0) no description available & (gnl|cdd|35575 : 430.0) no description available & (reliability: 1756.0) & (original description: Putative mph1, Description = ATP-dependent DNA helicase MPH1, PFAM = PF00271;PF04851)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold5372_10384-58702' '(at1g35530 : 817.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: in 6 functions; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36020.1). & (gnl|cdd|35575 : 433.0) no description available & (gnl|cdd|31308 : 432.0) no description available & (reliability: 1634.0) & (original description: Putative v1g133840, Description = Predicted protein, PFAM = PF04851;PF00271)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold5433_127537-132343' '(at5g23520 : 188.0) smr (Small MutS Related) domain-containing protein; CONTAINS InterPro DOMAIN/s: Smr protein/MutS2 C-terminal (InterPro:IPR002625), Domain of unknown function DUF1771 (InterPro:IPR013899); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative PGSC0003DMG400023332, Description = Smr (Small MutS Related) domain-containing protein, putative isoform 1, PFAM = PF08590;PF01713)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold6102_106408-117520' '(at5g04560 : 328.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 99.5) no description available & (reliability: 612.0) & (original description: Putative NtROS3, Description = Repressor of silencing 3, PFAM = PF15629;PF15628)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold6231_1173-6114' '(at1g26840 : 350.0) Origin Recognition Complex subunit 6. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors.; origin recognition complex protein 6 (ORC6); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA replication; LOCATED IN: origin recognition complex; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 6, metazoa/plant (InterPro:IPR020529), Origin recognition complex, subunit 6 (InterPro:IPR008721); Has 179 Blast hits to 179 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 105; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|39757 : 236.0) no description available & (gnl|cdd|69009 : 210.0) no description available & (reliability: 700.0) & (original description: Putative ORC6, Description = Origin of replication complex subunit 6, PFAM = PF05460)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold6337_6837-15893' '(at1g18800 : 284.0) Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP1. Bind histones Histone2A and Histone2B and associate with chromatin in vivo.; NAP1-related protein 2 (NRP2); FUNCTIONS IN: chromatin binding, histone binding, DNA binding; INVOLVED IN: cell proliferation, cell differentiation, nucleosome assembly, lateral root formation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: NAP1-related protein 1 (TAIR:AT1G74560.2); Has 4380 Blast hits to 3595 proteins in 373 species: Archae - 7; Bacteria - 141; Metazoa - 1827; Fungi - 714; Plants - 336; Viruses - 93; Other Eukaryotes - 1262 (source: NCBI BLink). & (gnl|cdd|36721 : 152.0) no description available & (gnl|cdd|85149 : 133.0) no description available & (reliability: 568.0) & (original description: Putative nrp, Description = Protein SET, PFAM = PF00956;PF00956)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold6809_1606-7425' '(at5g32440 : 196.0) Ubiquitin system component Cue protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1). & (reliability: 392.0) & (original description: Putative BnaC03g59170D, Description = BnaC03g59170D protein, PFAM = PF02845)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold6885_1-32162' '(at1g66730 : 1577.0) Encodes a novel plant specific DNA ligase that is involved in seed germination and DNA repair.; DNA LIGASE 6 (LIG6); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, seed germination, DNA recombination, DNA replication; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), DNA repair metallo-beta-lactamase (InterPro:IPR011084), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 4468 Blast hits to 4373 proteins in 907 species: Archae - 366; Bacteria - 1648; Metazoa - 644; Fungi - 681; Plants - 268; Viruses - 157; Other Eukaryotes - 704 (source: NCBI BLink). & (gnl|cdd|36185 : 807.0) no description available & (gnl|cdd|80824 : 419.0) no description available & (reliability: 3154.0) & (original description: Putative LIG6, Description = DNA ligase 6, PFAM = PF04675;PF04679;PF07522;PF01068)' T '28.1' 'DNA.synthesis/chromatin structure' 'nbv0.5scaffold10905_723-3113' '(gnl|cdd|28928 : 107.0) no description available & (gnl|cdd|35555 : 105.0) no description available & (at2g47330 : 94.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G20920.1); Has 46798 Blast hits to 46047 proteins in 3085 species: Archae - 817; Bacteria - 24489; Metazoa - 6167; Fungi - 4661; Plants - 2616; Viruses - 11; Other Eukaryotes - 8037 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative p62, Description = ATP-dependent RNA helicase p62, PFAM = PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044ctg26121602_1610-3904' '(at1g51080 : 166.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; Has 101 Blast hits to 98 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 10; Plants - 27; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative PGSC0003DMG400018255, Description = At1g51080, PFAM = PF12843)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00000427ctg010_1-13492' '(at3g04260 : 627.0) plastid transcriptionally active 3 (PTAC3); FUNCTIONS IN: DNA binding, nucleic acid binding; LOCATED IN: plastid chromosome, nucleus, chloroplast, nucleoid, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); BEST Arabidopsis thaliana protein match is: genomes uncoupled 1 (TAIR:AT2G31400.1); Has 11987 Blast hits to 8407 proteins in 477 species: Archae - 24; Bacteria - 285; Metazoa - 3588; Fungi - 1065; Plants - 3982; Viruses - 208; Other Eukaryotes - 2835 (source: NCBI BLink). & (reliability: 1254.0) & (original description: Putative oxer4, Description = DNA-binding proteinPTAC3, PFAM = PF02037)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00000806ctg000_1-13698' '(at3g10690 : 659.0) DNA GYRASE A (GYRA); FUNCTIONS IN: DNA topoisomerase activity, catalytic activity, ATP binding; INVOLVED IN: DNA topological change, DNA metabolic process; LOCATED IN: mitochondrion, chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA gyrase, subunit A (InterPro:IPR005743), DNA topoisomerase, type IIA, subunit A/C-terminal (InterPro:IPR002205), DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta (InterPro:IPR013758), DNA topoisomerase, type IIA, subunit A, alpha-helical (InterPro:IPR013757), DNA topoisomerase, type IIA, central (InterPro:IPR013760), DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel (InterPro:IPR006691); BEST Arabidopsis thaliana protein match is: topoisomerase II (TAIR:AT3G23890.1); Has 22353 Blast hits to 21396 proteins in 3265 species: Archae - 84; Bacteria - 12907; Metazoa - 182; Fungi - 204; Plants - 111; Viruses - 99; Other Eukaryotes - 8766 (source: NCBI BLink). & (gnl|cdd|81634 : 653.0) no description available & (q7xzf7|gyra_orysa : 639.0) Probable DNA gyrase subunit A, chloroplast/mitochondrial precursor (EC 5.99.1.3) - Oryza sativa (Rice) & (gnl|cdd|35576 : 264.0) no description available & (reliability: 1318.0) & (original description: Putative gyrA, Description = DNA gyrase subunit A, PFAM = PF00521)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00000939ctg006_7408-12144' '(at2g19480 : 314.0) This gene is predicted to encode a nucleosome assembly protein. Plant lines expressing an RNAi construct directed against this gene show a reduction in agrobacterium-mediated root transformation.; nucleosome assembly protein 1;2 (NAP1;2); CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: nucleosome assembly protein 1;3 (TAIR:AT5G56950.1). & (gnl|cdd|36720 : 242.0) no description available & (gnl|cdd|85149 : 226.0) no description available & (reliability: 628.0) & (original description: Putative NAP1, Description = Nucleosome assembly protein 1, PFAM = PF00956)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00001099ctg005_235-9667' '(at5g11170 : 789.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cadmium ion; LOCATED IN: nucleolus; EXPRESSED IN: guard cell, root, cultured cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein (TAIR:AT5G11200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35550 : 612.0) no description available & (gnl|cdd|30859 : 357.0) no description available & (p35683|if4a_orysa : 243.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (reliability: 1578.0) & (original description: Putative RH15, Description = DEAD-box ATP-dependent RNA helicase 15, PFAM = PF00270;PF00271)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00001414ctg006_2380-6162' '(at4g00660 : 370.0) RNAhelicase-like 8 (RH8); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: viral reproduction, virus-host interaction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G45810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35547 : 349.0) no description available & (gnl|cdd|30859 : 172.0) no description available & (p41381|if4a8_tobac : 124.0) Eukaryotic initiation factor 4A-8 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-8) (eIF-4A-8) - Nicotiana tabacum (Common tobacco) & (reliability: 740.0) & (original description: Putative ddx6, Description = ATP-dependent RNA helicase DHH1, PFAM = PF00270;PF00271)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00002213ctg012_1-10490' '(at4g14700 : 958.0) Encodes origin of replication complex 1a subunit.The protein contains a PHD domain,binds methylated DNA and appears to function as a transcriptional activator.; origin recognition complex 1 (ORC1A); CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Origin recognition complex, subunit 1 (InterPro:IPR020793), ATPase, AAA+ type, core (InterPro:IPR003593), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: origin of replication complex 1B (TAIR:AT4G12620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36727 : 615.0) no description available & (gnl|cdd|72858 : 235.0) no description available & (reliability: 1894.0) & (original description: Putative ORC1, Description = Origin of replication complex subunit 1, PFAM = PF01426;PF00004;PF00628)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00002645ctg010_1-2441' '(at5g17780 : 194.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G17720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36667 : 104.0) no description available & (reliability: 374.0) & (original description: Putative BDG1, Description = Hydrolase, alpha/beta fold family protein, PFAM = PF00561)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00003065ctg001_8188-22959' '(o48653|dpola_orysa : 1808.0) DNA polymerase alpha catalytic subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (at5g67100 : 1736.0) Encodes the putative catalytic subunit of the DNA polymerase alpha. Interacts with genes involved in chromatin-mediated cellular memory. ICU2 genetically interacts with TERMINAL FLOWER2, the ortholog of HETEROCHROMATIN PROTEIN1 of animals and yeasts, and with the Polycomb group (PcG) gene CURLY LEAF. A number of regulatory genes were derepressed in the icu2-1 mutant, including genes associated with flowering time, floral meristem, and floral organ identity. Mutant has curled, involute leaves and causes early flowering.; INCURVATA2 (ICU2); FUNCTIONS IN: DNA-directed DNA polymerase activity; INVOLVED IN: negative regulation of flower development, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134), Zinc finger, DNA-directed DNA polymerase, family B, alpha (InterPro:IPR015088), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B, pol2 (InterPro:IPR004578); BEST Arabidopsis thaliana protein match is: DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases (TAIR:AT5G63960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36188 : 1272.0) no description available & (gnl|cdd|84550 : 377.0) no description available & (reliability: 3472.0) & (original description: Putative Os01g0868300, Description = DNA polymerase alpha catalytic subunit, PFAM = PF03104;PF00136;PF08996;PF12254)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00003137ctg015_1-4598' '(at5g56780 : 268.0) effector of transcription2 (ET2); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26170.1); Has 86 Blast hits to 52 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative ET3, Description = AtET3, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00003466ctg011_1-3358' '(at1g73875 : 206.0) DNAse I-like superfamily protein; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT3G18500.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative At1g73875, Description = Carbon catabolite repressor protein 4 like 3, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00003868ctg027_893-10189' '(at5g40840 : 138.0) Cohesion family protein SYN2 (SYN2).; SYN2; CONTAINS InterPro DOMAIN/s: Rad21/Rec8 like protein, C-terminal (InterPro:IPR006909); BEST Arabidopsis thaliana protein match is: sister chromatid cohesion 1 protein 4 (TAIR:AT5G16270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36427 : 106.0) no description available & (reliability: 276.0) & (original description: Putative PGSC0003DMG401020221, Description = , PFAM = PF04825;PF04824)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00004794ctg000_7498-18246' '(at5g04895 : 359.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: double-stranded RNA binding, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, intracellular; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding (InterPro:IPR001159), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G48650.2); Has 12653 Blast hits to 8846 proteins in 1499 species: Archae - 0; Bacteria - 5024; Metazoa - 2916; Fungi - 1709; Plants - 1004; Viruses - 56; Other Eukaryotes - 1944 (source: NCBI BLink). & (gnl|cdd|36138 : 209.0) no description available & (gnl|cdd|86655 : 100.0) no description available & (reliability: 718.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF04408)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00004794ctg004_1-2310' '(at5g04895 : 233.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: double-stranded RNA binding, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, intracellular; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding (InterPro:IPR001159), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G48650.2); Has 12653 Blast hits to 8846 proteins in 1499 species: Archae - 0; Bacteria - 5024; Metazoa - 2916; Fungi - 1709; Plants - 1004; Viruses - 56; Other Eukaryotes - 1944 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative At1g48650, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF00035)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00005024ctg004_1-4482' '(at3g53320 : 85.1) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37070.1); Has 11044 Blast hits to 5993 proteins in 551 species: Archae - 8; Bacteria - 1486; Metazoa - 4078; Fungi - 1814; Plants - 348; Viruses - 112; Other Eukaryotes - 3198 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00005295ctg000_28427-35532' '(at1g01370 : 122.0) Encodes a centromere-identifying protein histone H3 variant. Localized at centromeres in both mitotic and meiotic cells.; HTR12; FUNCTIONS IN: DNA binding; INVOLVED IN: double fertilization forming a zygote and endosperm; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: male-gamete-specific histone H3 (TAIR:AT1G19890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36956 : 116.0) no description available & (gnl|cdd|47735 : 113.0) no description available & (q5dwi3|h3_marpo : 87.0) Histone H3 - Marchantia polymorpha (Liverwort) & (reliability: 244.0) & (original description: Putative HTR12, Description = Histone H3-like centromeric protein HTR12, PFAM = PF00125)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00005785ctg006_3734-8144' '(at5g63920 : 234.0) Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates.; topoisomerase 3alpha (TOP3A); FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase type I activity, DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: in 7 processes; LOCATED IN: chromosome; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA topoisomerase, type IA, zn finger (InterPro:IPR013498), DNA topoisomerase, type IA, core (InterPro:IPR000380), DNA topoisomerase, type IA, domain 2 (InterPro:IPR003601), DNA topoisomerase, type IA, DNA-binding (InterPro:IPR003602), DNA topoisomerase, type IA, central (InterPro:IPR013497), Zinc finger, GRF-type (InterPro:IPR010666), DNA topoisomerase, type IA, central region, subdomain 3 (InterPro:IPR013826), Toprim domain, subgroup (InterPro:IPR006154), DNA topoisomerase, type IA, central region, subdomain 1 (InterPro:IPR013824), Toprim domain (InterPro:IPR006171), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: DNA topoisomerase, type IA, core (TAIR:AT2G32000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37167 : 178.0) no description available & (gnl|cdd|73184 : 119.0) no description available & (reliability: 468.0) & (original description: Putative top3a, Description = DNA topoisomerase, PFAM = PF01131)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00006897ctg002_13277-19205' '(at5g04110 : 160.0) DNA GYRASE B3 (GYRB3); FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, ATP binding; INVOLVED IN: DNA topological change, DNA metabolic process; LOCATED IN: chromosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA topoisomerase, type IIA, subunit B, domain 2 (InterPro:IPR013506), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), DNA topoisomerase, type IIA, subunit B (InterPro:IPR000565), DNA topoisomerase, type IIA, subunit B/N-terminal (InterPro:IPR001241); BEST Arabidopsis thaliana protein match is: DNA GYRASE B2 (TAIR:AT5G04130.1); Has 21414 Blast hits to 21375 proteins in 6002 species: Archae - 105; Bacteria - 17678; Metazoa - 58; Fungi - 26; Plants - 200; Viruses - 8; Other Eukaryotes - 3339 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative GYRB3, Description = Putative ovule protein, PFAM = PF01448)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00007678ctg000_4953-10715' '(at2g26280 : 608.0) smr (Small MutS Related) domain-containing protein mRNA, complete cds; CID7; FUNCTIONS IN: damaged DNA binding, protein binding, ATP binding; INVOLVED IN: mismatch repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Smr protein/MutS2 C-terminal (InterPro:IPR002625), Region of unknown function DUF1771 (InterPro:IPR013899); BEST Arabidopsis thaliana protein match is: PRLI-interacting factor, putative (TAIR:AT5G58720.1); Has 309 Blast hits to 309 proteins in 103 species: Archae - 0; Bacteria - 0; Metazoa - 71; Fungi - 126; Plants - 79; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 1216.0) & (original description: Putative Sb01g045220, Description = Putative uncharacterized protein Sb01g045220, PFAM = PF01713;PF08590)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00007888ctg001_7757-19029' '(at2g30800 : 1340.0) Has RNA or DNA helicase activity and expressed specifically in tapetum and vascular tissue. First identified member of a new group of the mle helicase group of the DEAH family.; helicase in vascular tissue and tapetum (HVT1); CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Ankyrin repeat-containing domain (InterPro:IPR020683), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Single-stranded nucleic acid binding R3H (InterPro:IPR001374), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: nuclear DEIH-boxhelicase (TAIR:AT1G06670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36138 : 469.0) no description available & (gnl|cdd|31829 : 261.0) no description available & (reliability: 2680.0) & (original description: Putative HVT1, Description = DExH-box ATP-dependent RNA helicase DExH6, PFAM = PF04408;PF01424;PF07717;PF00271)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00007952ctg005_1-1988' '(at5g57160 : 166.0) Encodes the Arabidopsis orthologue of the yeast and mammalian DNA ligase IV. Involved in the repair of DNA damage but, unlike in yeast, not required for T-DNA integration. Interacts with the Arabidopsis homologue of XRCC4.; ATLIG4; FUNCTIONS IN: protein binding, DNA ligase (ATP) activity; INVOLVED IN: double-strand break repair, response to X-ray, response to DNA damage stimulus; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059), ATP-dependent DNA ligase (InterPro:IPR000977), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 7656 Blast hits to 6618 proteins in 1076 species: Archae - 317; Bacteria - 1869; Metazoa - 2250; Fungi - 907; Plants - 304; Viruses - 214; Other Eukaryotes - 1795 (source: NCBI BLink). & (q7x7e9|dnl4_orysa : 108.0) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (gnl|cdd|36184 : 104.0) no description available & (reliability: 332.0) & (original description: Putative LIG4, Description = DNA ligase, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00007992ctg002_3260-6804' '(at5g17690 : 145.0) Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state.; TERMINAL FLOWER 2 (TFL2); CONTAINS InterPro DOMAIN/s: Chromo domain subgroup (InterPro:IPR017984), Chromo domain-like (InterPro:IPR016197), Chromo shadow, subgroup (InterPro:IPR018125), Chromo domain (InterPro:IPR000953); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q339w7|lhp1_orysa : 110.0) Probable protein LIKE HETEROCHROMATIN PROTEIN1 (LHP1) - Oryza sativa (Rice) & (reliability: 290.0) & (original description: Putative lhp1, Description = Putative chromo domain protein LHP1-like, PFAM = PF00385)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00008501ctg006_1-3343' '(at5g56950 : 233.0) Encodes a member of a small gene family of proteins with similarity to nucleosome assembly proteins.May function in nucleotide excision repair. Loss of function mutations have no obvious visible phenotypes but do seem to affect transcription of NER related genes.; nucleosome assembly protein 1;3 (NAP1;3); CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: nucleosome assembly protein1;1 (TAIR:AT4G26110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36720 : 232.0) no description available & (gnl|cdd|85149 : 204.0) no description available & (reliability: 466.0) & (original description: Putative 1, Description = Nucleosome assembly protein 1, PFAM = PF00956)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00009996ctg030_5190-14914' '(at2g31450 : 369.0) ATNTH1; CONTAINS InterPro DOMAIN/s: Helix-hairpin-helix motif (InterPro:IPR000445), Helix-hairpin-helix DNA-binding motif, class 1 (InterPro:IPR003583), Endonuclease III, iron-sulphur binding site (InterPro:IPR004035), DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), Endonuclease III, conserved site-2 (InterPro:IPR004036), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: endonuclease III 2 (TAIR:AT1G05900.2); Has 14133 Blast hits to 14127 proteins in 2683 species: Archae - 365; Bacteria - 9377; Metazoa - 224; Fungi - 192; Plants - 158; Viruses - 0; Other Eukaryotes - 3817 (source: NCBI BLink). & (gnl|cdd|37132 : 347.0) no description available & (gnl|cdd|30526 : 207.0) no description available & (reliability: 738.0) & (original description: Putative NTH1, Description = Endonuclease III homolog 1, chloroplastic, PFAM = PF00633;PF00730)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00010363ctg001_26162-29226' '(at1g58060 : 199.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G58050.1); Has 14563 Blast hits to 8989 proteins in 1532 species: Archae - 4; Bacteria - 6119; Metazoa - 3212; Fungi - 1916; Plants - 1040; Viruses - 151; Other Eukaryotes - 2121 (source: NCBI BLink). & (gnl|cdd|36138 : 120.0) no description available & (reliability: 398.0) & (original description: Putative RG11, Description = ATP-dependent RNA helicase DHX29, PFAM = PF04408)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00010381ctg000_1-2370' '(at3g22470 : 159.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G12300.1); Has 71386 Blast hits to 15586 proteins in 313 species: Archae - 4; Bacteria - 76; Metazoa - 1075; Fungi - 1368; Plants - 66381; Viruses - 0; Other Eukaryotes - 2482 (source: NCBI BLink). & (q76c99|rf1_orysa : 124.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 304.0) & (original description: Putative , Description = , PFAM = PF12854;PF13041;PF13041)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00010727ctg000_1-6200' '(at3g53110 : 298.0) Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4); FUNCTIONS IN: RNA helicase activity, RNA-dependent ATPase activity, ATP-dependent helicase activity; INVOLVED IN: poly(A)+ mRNA export from nucleus, response to cold, response to heat, response to abscisic acid stimulus; LOCATED IN: nuclear envelope, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1); Has 40925 Blast hits to 40635 proteins in 3033 species: Archae - 702; Bacteria - 21081; Metazoa - 5720; Fungi - 4311; Plants - 2419; Viruses - 28; Other Eukaryotes - 6664 (source: NCBI BLink). & (gnl|cdd|35553 : 240.0) no description available & (gnl|cdd|28928 : 153.0) no description available & (p41378|if4a_wheat : 89.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Triticum aestivum (Wheat) & (reliability: 596.0) & (original description: Putative helC, Description = LOS4, PFAM = PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00011038ctg011_595-8822' '(at3g54350 : 166.0) embryo defective 1967 (emb1967); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: Forkhead-associated (FHA) domain-containing protein (TAIR:AT1G75530.1); Has 387 Blast hits to 260 proteins in 92 species: Archae - 0; Bacteria - 0; Metazoa - 229; Fungi - 23; Plants - 94; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|37504 : 164.0) no description available & (reliability: 332.0) & (original description: Putative At1g75530, Description = Forkhead-associated (FHA) domain-containing protein, PFAM = PF13325;PF00498)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00011038ctg011_687-9256' '(at3g54350 : 152.0) embryo defective 1967 (emb1967); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: Forkhead-associated (FHA) domain-containing protein (TAIR:AT1G75530.1); Has 387 Blast hits to 260 proteins in 92 species: Archae - 0; Bacteria - 0; Metazoa - 229; Fungi - 23; Plants - 94; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|37504 : 120.0) no description available & (reliability: 304.0) & (original description: Putative At1g75530, Description = Forkhead-associated (FHA) domain-containing protein, PFAM = PF13325)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00011859ctg010_1-1362' '(at5g09600 : 86.7) Encodes one of the membrane anchor subunits of the mitochondrial respiratory complex II. The protein is encoded by the nuclear genome but is imported into the mitochondrion. There are two genes that encode this protein, the other is SDH3-2.; succinate dehydrogenase 3-1 (SDH3-1); CONTAINS InterPro DOMAIN/s: Succinate dehydrogenase/Fumarate reductase, transmembrane subunit (InterPro:IPR000701); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 3-2 (TAIR:AT4G32210.1). & (reliability: 173.4) & (original description: Putative sdh3, Description = Succinate dehydrogenase subunit 3, PFAM = PF01127)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00012511ctg002_1747-24721' '(at2g28290 : 1140.0) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (gnl|cdd|35607 : 847.0) no description available & (q7g8y3|isw2_orysa : 346.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|84584 : 337.0) no description available & (reliability: 2280.0) & (original description: Putative snf21, Description = Chromatin structure-remodeling complex subunit snf21, PFAM = PF00271;PF00176;PF14619)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00012511ctg002_2658-19504' '(at2g28290 : 117.0) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative CHR3, Description = Chromatin structure-remodeling complex subunit snf21, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00012511ctg002_16245-20099' '(at2g28290 : 114.0) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative CHR3, Description = ATP-dependent helicase SYD, PFAM = PF14619)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00012862ctg006_30204-34902' '(q9lre6|dpod1_orysa : 369.0) DNA polymerase delta catalytic subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (at5g63960 : 351.0) EMBRYO DEFECTIVE 2780 (EMB2780); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: DNA replication, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B, pol2 (InterPro:IPR004578); BEST Arabidopsis thaliana protein match is: recovery protein 3 (TAIR:AT1G67500.2). & (gnl|cdd|36187 : 276.0) no description available & (reliability: 702.0) & (original description: Putative cdc6, Description = DNA polymerase, PFAM = PF14260;PF00136)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00013879ctg000_1927-10182' '(at4g24790 : 551.0) AAA-type ATPase family protein; FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication; LOCATED IN: DNA polymerase III complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), DNA polymerase III, subunit gamma/ tau (InterPro:IPR012763); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G14460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36207 : 296.0) no description available & (gnl|cdd|32641 : 259.0) no description available & (reliability: 1102.0) & (original description: Putative At4g24790, Description = Protein STICHEL-like 2, PFAM = PF13177)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00015420ctg009_8852-14871' '(at2g42320 : 542.0) nucleolar protein gar2-related; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1084.0) & (original description: Putative A20, Description = Putative uncharacterized protein A20, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00015587ctg003_1-6812' '(at4g15850 : 500.0) plant DEAD box-like RNA helicase.; RNA helicase 1 (RH1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT4G16630.1); Has 38711 Blast hits to 38056 proteins in 2969 species: Archae - 603; Bacteria - 19125; Metazoa - 5736; Fungi - 4393; Plants - 2535; Viruses - 13; Other Eukaryotes - 6306 (source: NCBI BLink). & (gnl|cdd|35571 : 312.0) no description available & (gnl|cdd|30859 : 147.0) no description available & (reliability: 1000.0) & (original description: Putative RH1, Description = DEAD-box ATP-dependent RNA helicase 1, PFAM = PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00015587ctg004_1-2173' '(at4g15850 : 120.0) plant DEAD box-like RNA helicase.; RNA helicase 1 (RH1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT4G16630.1); Has 38711 Blast hits to 38056 proteins in 2969 species: Archae - 603; Bacteria - 19125; Metazoa - 5736; Fungi - 4393; Plants - 2535; Viruses - 13; Other Eukaryotes - 6306 (source: NCBI BLink). & (gnl|cdd|35571 : 93.9) no description available & (reliability: 240.0) & (original description: Putative RH1, Description = DEAD-box ATP-dependent RNA helicase 1, PFAM = PF00271)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00015650ctg010_8255-12039' '(at3g22470 : 421.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G12300.1); Has 71386 Blast hits to 15586 proteins in 313 species: Archae - 4; Bacteria - 76; Metazoa - 1075; Fungi - 1368; Plants - 66381; Viruses - 0; Other Eukaryotes - 2482 (source: NCBI BLink). & (q76c99|rf1_orysa : 323.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 820.0) & (original description: Putative , Description = ATP binding,nucleic acid binding,helicases, putative, PFAM = PF12854;PF12854;PF13041;PF13041;PF13041;PF13041;PF13041)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00015665ctg002_16726-23920' '(at3g53440 : 136.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), MYB-like (InterPro:IPR017877); Has 4379 Blast hits to 2740 proteins in 256 species: Archae - 0; Bacteria - 81; Metazoa - 1861; Fungi - 384; Plants - 214; Viruses - 25; Other Eukaryotes - 1814 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative PGSC0003DMG400000839, Description = Homeodomain-like superfamily protein, putative, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00016565ctg011_1-1972' '(at5g44800 : 87.4) chromatin remodeling 4 (CHR4); FUNCTIONS IN: in 6 functions; INVOLVED IN: chromatin assembly or disassembly, regulation of transcription; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Homeodomain-related (InterPro:IPR012287), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 35726 Blast hits to 27895 proteins in 2283 species: Archae - 135; Bacteria - 6476; Metazoa - 12546; Fungi - 6155; Plants - 3074; Viruses - 328; Other Eukaryotes - 7012 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative Os02g0817000, Description = Os02g0817000 protein, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00018030ctg004_4170-14647' '(at5g55300 : 778.0) Encodes a type-I DNA topoisomerase I. Disruptions in this gene affect phyllotaxis and plant architecture suggesting that the gene plays a critical role in the maintenance of a regular pattern of organ initiation. Isolated as a protein oxidized during seed germination; proteomics approach revealed differences in de novo synthesis levels of this protein in condition with vs. without salicylic acid in the period from 0 to 40 hrs. following seed imbibition. Functions in stem cell maintenance at all stages of shoot and floral meristems and in the regulation of gene silencing.; DNA topoisomerase I alpha (TOP1ALPHA); FUNCTIONS IN: protein binding, DNA topoisomerase type I activity; INVOLVED IN: in 8 processes; LOCATED IN: chromosome; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA topoisomerase I, C-terminal (InterPro:IPR001631), DNA topoisomerase I, catalytic core, alpha/beta subdomain, eukaryotic-type (InterPro:IPR014727), DNA topoisomerase I, catalytic core, eukaryotic-type (InterPro:IPR013500), DNA topoisomerase I, active site (InterPro:IPR018521), DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type (InterPro:IPR014711), DNA breaking-rejoining enzyme, catalytic core (InterPro:IPR011010), DNA topoisomerase I, C-terminal, eukaryotic-type (InterPro:IPR013499); BEST Arabidopsis thaliana protein match is: DNA topoisomerase 1 beta (TAIR:AT5G55310.1). & (gnl|cdd|36199 : 772.0) no description available & (p93119|top1_dauca : 709.0) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I) - Daucus carota (Carrot) & (gnl|cdd|47742 : 499.0) no description available & (reliability: 1556.0) & (original description: Putative TOP1, Description = DNA topoisomerase 1, PFAM = PF14370;PF02919;PF01028)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00018262ctg003_1-3123' '(at4g32700 : 343.0) Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development.; helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding; FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of gene expression, DNA replication, DNA recombination, photomorphogenesis; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA/RNA helicase, C-terminal (InterPro:IPR001650), DNA polymerase A domain (InterPro:IPR002298), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1); Has 17628 Blast hits to 16579 proteins in 2941 species: Archae - 600; Bacteria - 7507; Metazoa - 1254; Fungi - 1190; Plants - 590; Viruses - 412; Other Eukaryotes - 6075 (source: NCBI BLink). & (gnl|cdd|82231 : 133.0) no description available & (reliability: 686.0) & (original description: Putative TEB, Description = DNA polymerase theta, PFAM = PF00476)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00018262ctg005_4203-24062' '(at4g32700 : 1257.0) Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development.; helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding; FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of gene expression, DNA replication, DNA recombination, photomorphogenesis; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA/RNA helicase, C-terminal (InterPro:IPR001650), DNA polymerase A domain (InterPro:IPR002298), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1); Has 17628 Blast hits to 16579 proteins in 2941 species: Archae - 600; Bacteria - 7507; Metazoa - 1254; Fungi - 1190; Plants - 590; Viruses - 412; Other Eukaryotes - 6075 (source: NCBI BLink). & (gnl|cdd|36168 : 711.0) no description available & (gnl|cdd|31397 : 299.0) no description available & (reliability: 2514.0) & (original description: Putative polq, Description = DNA polymerase theta, PFAM = PF00271;PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00018449ctg003_2784-8173' '(at3g55490 : 199.0) GINS complex protein; CONTAINS InterPro DOMAIN/s: GINS complex, subunit Psf3 (InterPro:IPR010492), GINS complex (InterPro:IPR021151); BEST Arabidopsis thaliana protein match is: GINS complex protein (TAIR:AT1G19080.2); Has 336 Blast hits to 336 proteins in 155 species: Archae - 0; Bacteria - 0; Metazoa - 141; Fungi - 114; Plants - 49; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|36322 : 133.0) no description available & (gnl|cdd|87078 : 131.0) no description available & (reliability: 398.0) & (original description: Putative TTN10, Description = At1g19080, PFAM = PF05916)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00020680ctg000_13593-23408' '(at3g53110 : 578.0) Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4); FUNCTIONS IN: RNA helicase activity, RNA-dependent ATPase activity, ATP-dependent helicase activity; INVOLVED IN: poly(A)+ mRNA export from nucleus, response to cold, response to heat, response to abscisic acid stimulus; LOCATED IN: nuclear envelope, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1); Has 40925 Blast hits to 40635 proteins in 3033 species: Archae - 702; Bacteria - 21081; Metazoa - 5720; Fungi - 4311; Plants - 2419; Viruses - 28; Other Eukaryotes - 6664 (source: NCBI BLink). & (gnl|cdd|35553 : 462.0) no description available & (gnl|cdd|30859 : 266.0) no description available & (p41380|if4a3_nicpl : 210.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1156.0) & (original description: Putative RH38, Description = DEAD-box ATP-dependent RNA helicase 38, PFAM = PF00270;PF00271)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00020982ctg005_1-5525' '(at5g56950 : 378.0) Encodes a member of a small gene family of proteins with similarity to nucleosome assembly proteins.May function in nucleotide excision repair. Loss of function mutations have no obvious visible phenotypes but do seem to affect transcription of NER related genes.; nucleosome assembly protein 1;3 (NAP1;3); CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: nucleosome assembly protein1;1 (TAIR:AT4G26110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36720 : 280.0) no description available & (gnl|cdd|85149 : 247.0) no description available & (reliability: 756.0) & (original description: Putative NAP1, Description = Nucleosome assembly protein 1, PFAM = PF00956)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00021872ctg006_9103-14657' '(at5g58720 : 90.9) smr (Small MutS Related) domain-containing protein; FUNCTIONS IN: damaged DNA binding, ATP binding; INVOLVED IN: mismatch repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Smr protein/MutS2 C-terminal (InterPro:IPR002625), Domain of unknown function DUF1771 (InterPro:IPR013899); BEST Arabidopsis thaliana protein match is: silencing defective 5 (TAIR:AT3G15390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00022637ctg006_11045-15294' '(at3g06980 : 155.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RH39 (TAIR:AT4G09730.1); Has 36871 Blast hits to 36254 proteins in 2997 species: Archae - 517; Bacteria - 17572; Metazoa - 5953; Fungi - 4324; Plants - 2343; Viruses - 14; Other Eukaryotes - 6148 (source: NCBI BLink). & (gnl|cdd|35552 : 98.9) no description available & (gnl|cdd|28928 : 89.8) no description available & (reliability: 310.0) & (original description: Putative HEL, Description = DEAD-box ATP-dependent RNA helicase 50, PFAM = PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00023067ctg000_1-9476' '(at1g05630 : 1413.0) Encodes an inositol polyphosphate 5-phosphatase with phosphatase activity toward only Ins(1,4,5)P3. Induced in response to ABA and wounding treatments. Expressed in young seedlings and flowers, while no transcripts were detectable in maturated roots, stems, and rosette leaves Modulates the development of cotyledon veins through its regulation of auxin homeostasis. Involved in blue light lightñstimulated increase in cytosolic calcium ion.; 5PTASE13; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: endonuclease/exonuclease/phosphatase family protein (TAIR:AT2G31830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35786 : 127.0) no description available & (gnl|cdd|47467 : 126.0) no description available & (reliability: 2770.0) & (original description: Putative IP5P12, Description = Type I inositol polyphosphate 5-phosphatase 12, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00024580ctg000_623-7173' '(at1g63160 : 605.0) replication factor C 2 (RFC2); FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA replication; LOCATED IN: DNA replication factor C complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Replication factor C (InterPro:IPR013748), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921); BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA) (TAIR:AT1G21690.1); Has 17520 Blast hits to 17472 proteins in 2840 species: Archae - 620; Bacteria - 9832; Metazoa - 859; Fungi - 958; Plants - 372; Viruses - 89; Other Eukaryotes - 4790 (source: NCBI BLink). & (gnl|cdd|36209 : 558.0) no description available & (gnl|cdd|80670 : 338.0) no description available & (reliability: 1210.0) & (original description: Putative RFC2, Description = Replication factor C subunit 2, PFAM = PF00004;PF08542)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00024841ctg002_8872-17395' '(at2g37440 : 526.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell, root; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: CVP2 like 1 (TAIR:AT2G32010.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35786 : 227.0) no description available & (gnl|cdd|47467 : 193.0) no description available & (reliability: 1052.0) & (original description: Putative IP5P8, Description = Type I inositol polyphosphate 5-phosphatase 8, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00024853ctg005_1-4100' '(at4g25120 : 266.0) Encodes a homolog of the yeast SRS2 (Suppressor of RAD Six-screen mutant 2) helicase. The Arabidopsis SRS2 is a functional 3í- to 5í-helicase. Biochemical studies show that SRS2 disrupts recombinogenic DNA intermediates and facilitates single strand annealing.; SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2 (SRS2); CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD-like, C-terminal (InterPro:IPR014017), Helicase, superfamily 1, UvrD-related (InterPro:IPR014016), DNA helicase, UvrD/REP type (InterPro:IPR000212); Has 26201 Blast hits to 22116 proteins in 2711 species: Archae - 259; Bacteria - 18888; Metazoa - 18; Fungi - 176; Plants - 81; Viruses - 13; Other Eukaryotes - 6766 (source: NCBI BLink). & (gnl|cdd|30559 : 101.0) no description available & (gnl|cdd|37319 : 98.9) no description available & (reliability: 532.0) & (original description: Putative SRS2, Description = ATP-dependent DNA helicase pcrA, PFAM = PF13361)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00025188ctg009_18191-26249' '(at2g03390 : 352.0) uvrB/uvrC motif-containing protein; FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: nucleotide-excision repair; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Hemimethylated DNA-binding domain (InterPro:IPR011722), UvrB/UvrC protein (InterPro:IPR001943). & (gnl|cdd|87631 : 95.7) no description available & (reliability: 704.0) & (original description: Putative At2g03390, Description = Putative uncharacterized protein At2g03390, PFAM = PF08755;PF02151)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00025913ctg011_2037-6105' '(at5g65630 : 284.0) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE7 show some resistance to agrobacterium-mediated root transformation.; global transcription factor group E7 (GTE7); CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: global transcription factor group E2 (TAIR:AT5G10550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36687 : 203.0) no description available & (gnl|cdd|47625 : 97.7) no description available & (reliability: 526.0) & (original description: Putative GTE4, Description = Transcription factor GTE4, PFAM = PF17035;PF00439)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00026031ctg000_1-7636' '(at1g14900 : 80.9) Encodes a protein belonging to the subgroup of HMGA (high mobility group A) proteins that interact with A/T-rich stretches of DNA.; high mobility group A (HMGA); FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent, nucleosome assembly; LOCATED IN: cytosol, nuclear chromatin, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), A.T hook-like (InterPro:IPR020478), AT hook, DNA-binding motif (InterPro:IPR017956), High mobility group, HMG-I/HMG-Y (InterPro:IPR000116), Histone H1/H5 (InterPro:IPR005818); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT3G18035.1); Has 1377 Blast hits to 1228 proteins in 223 species: Archae - 0; Bacteria - 119; Metazoa - 428; Fungi - 179; Plants - 544; Viruses - 9; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative HMGA, Description = HMG-Y-related protein A, PFAM = PF02178;PF02178;PF02178;PF00538)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00028097ctg002_1592-7312' '(at1g65780 : 382.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G65810.1); Has 5699 Blast hits to 4991 proteins in 919 species: Archae - 198; Bacteria - 1488; Metazoa - 1292; Fungi - 1154; Plants - 656; Viruses - 49; Other Eukaryotes - 862 (source: NCBI BLink). & (gnl|cdd|37012 : 238.0) no description available & (gnl|cdd|31309 : 88.1) no description available & (reliability: 764.0) & (original description: Putative At5g37030, Description = TPR and ankyrin repeat-containing protein 1, PFAM = PF13087;PF13086)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00028186ctg003_5204-17558' '(at4g15570 : 288.0) Similar to yeast Sen1 (splicing endonuclease 1)helicase protein. Involved in female gametophyte development.; MAGATAMA 3 (MAA3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen-pistil interaction, pollen tube guidance, embryo sac development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G16800.1); Has 6636 Blast hits to 6003 proteins in 1303 species: Archae - 237; Bacteria - 1922; Metazoa - 1300; Fungi - 1113; Plants - 639; Viruses - 442; Other Eukaryotes - 983 (source: NCBI BLink). & (reliability: 576.0) & (original description: Putative MAA3, Description = Putative helicase DDB-G0274399, PFAM = PF13086)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00028700ctg010_1-3730' '(at1g80040 : 135.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1). & (reliability: 262.0) & (original description: Putative BnaA07g07960D, Description = BnaA07g07960D protein, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00029460ctg008_179-6197' '(at1g65580 : 745.0) FRAGILE FIBER3 (FRA3); FUNCTIONS IN: inositol or phosphatidylinositol phosphatase activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Endonuclease/exonuclease/phosphatase family protein (TAIR:AT2G43900.1); Has 2602 Blast hits to 2499 proteins in 289 species: Archae - 0; Bacteria - 180; Metazoa - 887; Fungi - 607; Plants - 609; Viruses - 0; Other Eukaryotes - 319 (source: NCBI BLink). & (gnl|cdd|35786 : 204.0) no description available & (gnl|cdd|47467 : 196.0) no description available & (reliability: 1490.0) & (original description: Putative Sb04g018960, Description = Putative uncharacterized protein Sb04g018960, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00030042ctg015_21023-26182' '(at2g48030 : 462.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT3G21530.1); Has 404 Blast hits to 404 proteins in 167 species: Archae - 0; Bacteria - 325; Metazoa - 1; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 924.0) & (original description: Putative At2g48030, Description = At2g48030, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00030192ctg008_1980-6229' '(at5g16690 : 194.0) Origin Recognition Complex subunit 3. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with all ORC subunits except ORC1b.; origin recognition complex subunit 3 (ORC3); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 3, N-terminal (InterPro:IPR010748), Origin recognition complex, subunit 3 (InterPro:IPR020795); Has 319 Blast hits to 284 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 161; Fungi - 89; Plants - 45; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative ORC3, Description = Origin recognition complex subunit 3, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00030273ctg001_1992-6175' '(at3g21530 : 469.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT2G48030.1); Has 250 Blast hits to 250 proteins in 102 species: Archae - 0; Bacteria - 169; Metazoa - 0; Fungi - 2; Plants - 38; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (reliability: 938.0) & (original description: Putative At2g48030, Description = At2g48030, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00031300ctg000_1-5373' '(at1g67320 : 419.0) DNA primase, large subunit family; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication, synthesis of RNA primer; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA primase, large subunit, eukaryotic (InterPro:IPR016558), DNA primase, large subunit, eukaryotic/archaeal (InterPro:IPR007238). & (gnl|cdd|37478 : 258.0) no description available & (gnl|cdd|86545 : 179.0) no description available & (reliability: 838.0) & (original description: Putative pri2, Description = DNA primase large subunit, PFAM = PF04104)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00032010ctg006_1662-5216' '(at1g74350 : 759.0) Intron maturase, type II family protein; FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity; INVOLVED IN: RNA-dependent DNA replication, RNA splicing; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot, shoot apex, stem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Intron maturase, type II (InterPro:IPR000442), RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477); BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase) (TAIR:AT5G04050.1); Has 3669 Blast hits to 3587 proteins in 1202 species: Archae - 32; Bacteria - 2608; Metazoa - 4; Fungi - 43; Plants - 874; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (gnl|cdd|73157 : 130.0) no description available & (p38478|ymf40_marpo : 80.1) Hypothetical 57.7 kDa protein in 18S rRNA intron 1 (ORF 502) - Marchantia polymorpha (Liverwort) & (reliability: 1518.0) & (original description: Putative Os06g0634100, Description = Os06g0634100 protein, PFAM = PF00078;PF01348)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00032025ctg010_9842-15067' '(at5g49010 : 211.0) Similar to the SLD5 component of GINS complex, which in other organism was shown to be involved in the initiation of DNA replication.; SYNTHETIC LETHALITY WITH DPB11-1 5 (SLD5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: DNA-dependent DNA replication initiation; LOCATED IN: GINS complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GINS complex, subunit Sld5 (InterPro:IPR008591), GINS complex (InterPro:IPR021151); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69439 : 134.0) no description available & (gnl|cdd|38386 : 123.0) no description available & (reliability: 422.0) & (original description: Putative SLD5, Description = DNA replication complex GINS protein SLD5, PFAM = PF05916)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00033454ctg004_2558-11821' '(at1g27850 : 410.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40070.1); Has 9215 Blast hits to 5316 proteins in 473 species: Archae - 6; Bacteria - 773; Metazoa - 3392; Fungi - 1710; Plants - 539; Viruses - 143; Other Eukaryotes - 2652 (source: NCBI BLink). & (reliability: 820.0) & (original description: Putative PGSC0003DMG400017461, Description = AT3g09000/T16O11_4, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00035094ctg001_7809-10622' '(gnl|cdd|37652 : 383.0) no description available & (at1g77180 : 377.0) Encodes a putative transcriptional factor. Shows transcriptional activator activity in yeast. Involved in response to abscisic acid, salt and osmotic stress.; SKIP; CONTAINS InterPro DOMAIN/s: SKI-interacting protein, SKIP (InterPro:IPR017862), SKI-interacting protein SKIP, SNW domain (InterPro:IPR004015). & (gnl|cdd|66416 : 232.0) no description available & (reliability: 754.0) & (original description: Putative snw1, Description = Snw1 protein, PFAM = PF02731)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00036265ctg000_3086-7979' '(at1g11800 : 416.0) endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), Zinc finger, RanBP2-type (InterPro:IPR001876); Has 386 Blast hits to 366 proteins in 96 species: Archae - 0; Bacteria - 14; Metazoa - 170; Fungi - 14; Plants - 104; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (gnl|cdd|37967 : 254.0) no description available & (reliability: 832.0) & (original description: Putative Os12g0414900, Description = Endonuclease/Exonuclease/phosphatase family protein, expressed, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00036674ctg007_29504-39951' '(at1g20960 : 3085.0) embryo defective 1507 (emb1507); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1). & (gnl|cdd|36169 : 2157.0) no description available & (gnl|cdd|31397 : 523.0) no description available & (reliability: 6170.0) & (original description: Putative BRR2A, Description = DExH-box ATP-dependent RNA helicase DExH12, PFAM = PF00270;PF00270;PF02889;PF02889)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00037381ctg000_1-17097' '(at4g32700 : 1649.0) Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development.; helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding; FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of gene expression, DNA replication, DNA recombination, photomorphogenesis; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA/RNA helicase, C-terminal (InterPro:IPR001650), DNA polymerase A domain (InterPro:IPR002298), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1); Has 17628 Blast hits to 16579 proteins in 2941 species: Archae - 600; Bacteria - 7507; Metazoa - 1254; Fungi - 1190; Plants - 590; Viruses - 412; Other Eukaryotes - 6075 (source: NCBI BLink). & (gnl|cdd|36168 : 712.0) no description available & (gnl|cdd|31397 : 301.0) no description available & (reliability: 3298.0) & (original description: Putative polq, Description = DNA polymerase theta, PFAM = PF00270;PF00271)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00041069ctg015_1-7077' '(at5g46280 : 968.0) MINICHROMOSOME MAINTENANCE 3 (MCM3); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 3 (InterPro:IPR008046); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT4G02060.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35700 : 938.0) no description available & (q43704|mcm3_maize : 824.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (gnl|cdd|47677 : 583.0) no description available & (reliability: 1936.0) & (original description: Putative ROA1, Description = DNA replication licensing factor MCM3 homolog 1, PFAM = PF14551;PF17207;PF00493)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00041244ctg005_146-3526' '(at4g30100 : 250.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G19120.1); Has 5876 Blast hits to 5615 proteins in 1104 species: Archae - 176; Bacteria - 1754; Metazoa - 1255; Fungi - 973; Plants - 640; Viruses - 179; Other Eukaryotes - 899 (source: NCBI BLink). & (reliability: 500.0) & (original description: Putative At2g19120, Description = Putative helicase MAGATAMA 3, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00043987ctg002_2963-10476' '(at2g47330 : 965.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G20920.1); Has 46798 Blast hits to 46047 proteins in 3085 species: Archae - 817; Bacteria - 24489; Metazoa - 6167; Fungi - 4661; Plants - 2616; Viruses - 11; Other Eukaryotes - 8037 (source: NCBI BLink). & (gnl|cdd|35560 : 810.0) no description available & (gnl|cdd|30859 : 385.0) no description available & (p46942|db10_nicsy : 328.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1930.0) & (original description: Putative RH24, Description = DEAD-box ATP-dependent RNA helicase 24, PFAM = PF00271;PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00046334ctg001_1573-8764' '(at3g13170 : 472.0) Encodes AtSPO11-1, one of the three Arabidopsis homologues of the archaeal DNA topoisomerase VIA subunit (topo VIA). Required for meiotic recombination. AtSPO11-1 and AtSPO11-2 have overlapping functions (i.e. both required for meiotic recombination) whereas AtSPO11-3 functions in DNA replication. AtSPO11-1 accumulates in foci in early G2. At 1 h post-S phase, no foci are observed, but by 3 h a majority (80%) of meiocytes at this time point contain >50 foci. However, by 5 h, AtSPO11-1 foci are no longer detectable. This suggests that the protein undergoes a rapid cycle of accumulation and disappearance in meiocytes over a period of between 1 and 5 h post-S phase.; ATSPO11-1; CONTAINS InterPro DOMAIN/s: Spo11/DNA topoisomerase VI, subunit A, N-terminal (InterPro:IPR013049), Meiotic recombination, Spo11 (InterPro:IPR013048), Spo11/DNA topoisomerase VI, subunit A (InterPro:IPR002815); BEST Arabidopsis thaliana protein match is: Spo11/DNA topoisomerase VI, subunit A protein (TAIR:AT5G02820.1); Has 908 Blast hits to 908 proteins in 313 species: Archae - 216; Bacteria - 16; Metazoa - 170; Fungi - 122; Plants - 151; Viruses - 0; Other Eukaryotes - 233 (source: NCBI BLink). & (gnl|cdd|38006 : 357.0) no description available & (gnl|cdd|31883 : 220.0) no description available & (reliability: 944.0) & (original description: Putative TOP6A, Description = Meiotic recombination protein SPO11-1, PFAM = PF04406)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00046891ctg006_1613-13767' '(at5g04560 : 541.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 102.0) no description available & (reliability: 1006.0) & (original description: Putative pg3, Description = Protein ROS1, PFAM = PF15628)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00048279ctg004_1-4187' '(at5g44750 : 103.0) Homologous to Y-family DNA polymerases, contains BRCT domain. Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS).; REV1; FUNCTIONS IN: DNA-directed DNA polymerase activity; INVOLVED IN: DNA repair, response to UV-B, response to DNA damage stimulus; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, Y-family, little finger domain (InterPro:IPR017961), DNA-repair protein, UmuC-like (InterPro:IPR001126), DNA-repair protein, UmuC-like, N-terminal (InterPro:IPR017963), DNA repair protein, Rev1 (InterPro:IPR012112), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: DNA/RNA polymerases superfamily protein (TAIR:AT1G49980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative , Description = DNA repair protein REV1, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00050980ctg000_1-5359' '(at4g12740 : 466.0) HhH-GPD base excision DNA repair family protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), DNA glycosylase (InterPro:IPR011257), NUDIX hydrolase domain (InterPro:IPR000086), HhH-GPD domain (InterPro:IPR003265); Has 55833 Blast hits to 29061 proteins in 2861 species: Archae - 372; Bacteria - 10631; Metazoa - 17750; Fungi - 4523; Plants - 1695; Viruses - 834; Other Eukaryotes - 20028 (source: NCBI BLink). & (gnl|cdd|37668 : 369.0) no description available & (gnl|cdd|31387 : 314.0) no description available & (reliability: 932.0) & (original description: Putative Mutyh, Description = Adenine DNA glycosylase, PFAM = PF14815;PF00730)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00052854ctg001_1-3888' '(at1g07540 : 152.0) Arabidopsis thaliana telomere-binding protein, putative (At1g07540); TRF-like 2 (TRFL2); FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 1 (TAIR:AT3G46590.2); Has 350 Blast hits to 338 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 4; Plants - 309; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative TBP1, Description = Putative telomere repeat-binding protein 5-like, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00053274ctg003_138-2894' '(at1g70070 : 189.0) Allelic to ISE2(increased size exclusion limit of plasmodesmata 2). Mutants maintain dilated plasmodesmata at the embryonic torpedo stage.; EMBRYO DEFECTIVE 25 (EMB25); FUNCTIONS IN: RNA helicase activity, ATP-dependent helicase activity; INVOLVED IN: posttranscriptional gene silencing, plasmodesmata-mediated intercellular transport, embryo development ending in seed dormancy; LOCATED IN: stress granule, chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT3G46960.1); Has 21396 Blast hits to 12786 proteins in 1473 species: Archae - 1027; Bacteria - 4600; Metazoa - 5457; Fungi - 2724; Plants - 1158; Viruses - 307; Other Eukaryotes - 6123 (source: NCBI BLink). & (gnl|cdd|36165 : 101.0) no description available & (reliability: 378.0) & (original description: Putative ISE2, Description = DEAD-box ATP-dependent RNA helicase ISE2, PFAM = PF08148)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00053439ctg000_1-1255' '(at3g18600 : 149.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 44310 Blast hits to 43105 proteins in 3082 species: Archae - 753; Bacteria - 22440; Metazoa - 6214; Fungi - 4682; Plants - 2500; Viruses - 12; Other Eukaryotes - 7709 (source: NCBI BLink). & (gnl|cdd|35563 : 140.0) no description available & (gnl|cdd|28928 : 110.0) no description available & (reliability: 298.0) & (original description: Putative has1, Description = ATP-dependent RNA helicase HAS1, PFAM = PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben044scf00057225ctg000_450-9117' '(at2g23840 : 318.0) HNH endonuclease; FUNCTIONS IN: endonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HNH nuclease (InterPro:IPR003615), HNH endonuclease (InterPro:IPR002711); Has 4176 Blast hits to 4176 proteins in 656 species: Archae - 6; Bacteria - 1679; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 29; Other Eukaryotes - 2425 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative mcrA, Description = HNH endonuclease family protein, PFAM = PF14279)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101ctg15694_297-3157' '(at1g51080 : 166.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; Has 101 Blast hits to 98 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 10; Plants - 27; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative PGSC0003DMG400018255, Description = At1g51080, PFAM = PF12843)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00039_92538-108403' '(at4g30870 : 640.0) Encodes an Arabidopsis homolog of the endonuclease MSU81. T-DNA insertion lines of AtMSU81 have a deficiency in homologous recombination in somatic cells but only after genotoxic stress. Crosses with a hyperrecombinogenic mutant of the AtRecQ4A helicase resulted in synthetic lethality in the double mutant.; MMS AND UV SENSITIVE 81 (MUS81); CONTAINS InterPro DOMAIN/s: ERCC4 domain (InterPro:IPR006166), Helix-hairpin-helix DNA-binding motif, class 1 (InterPro:IPR003583), Restriction endonuclease, type II-like (InterPro:IPR011335); BEST Arabidopsis thaliana protein match is: Restriction endonuclease, type II-like superfamily protein (TAIR:AT5G39770.1); Has 631 Blast hits to 481 proteins in 192 species: Archae - 11; Bacteria - 4; Metazoa - 158; Fungi - 249; Plants - 48; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (gnl|cdd|37590 : 227.0) no description available & (reliability: 1280.0) & (original description: Putative MUS81, Description = Crossover junction endonuclease MUS81, PFAM = PF02732)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00058_217830-221587' '(at3g21530 : 468.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT2G48030.1); Has 250 Blast hits to 250 proteins in 102 species: Archae - 0; Bacteria - 169; Metazoa - 0; Fungi - 2; Plants - 38; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (reliability: 936.0) & (original description: Putative At2g48030, Description = At2g48030, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00069_30754-62251' '(at2g47680 : 1100.0) zinc finger (CCCH type) helicase family protein; FUNCTIONS IN: helicase activity, zinc ion binding, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G01130.1); Has 9601 Blast hits to 8936 proteins in 1526 species: Archae - 0; Bacteria - 3317; Metazoa - 2456; Fungi - 1337; Plants - 806; Viruses - 205; Other Eukaryotes - 1480 (source: NCBI BLink). & (gnl|cdd|36138 : 446.0) no description available & (gnl|cdd|31829 : 272.0) no description available & (reliability: 2200.0) & (original description: Putative At2g47680, Description = DExH-box ATP-dependent RNA helicase DExH8, PFAM = PF00271;PF00270;PF00642)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00073_8694-17818' '(at4g18820 : 900.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: DNA replication; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), DNA polymerase III, subunit gamma/ tau (InterPro:IPR012763); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT5G45720.1); Has 12659 Blast hits to 12635 proteins in 2803 species: Archae - 377; Bacteria - 7447; Metazoa - 406; Fungi - 391; Plants - 312; Viruses - 22; Other Eukaryotes - 3704 (source: NCBI BLink). & (gnl|cdd|36207 : 372.0) no description available & (gnl|cdd|32641 : 238.0) no description available & (reliability: 1800.0) & (original description: Putative At4g18820, Description = Protein STICHEL-like 3, PFAM = PF13177;PF12169)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00109_556341-567213' '(gnl|cdd|36427 : 150.0) no description available & (at5g40840 : 139.0) Cohesion family protein SYN2 (SYN2).; SYN2; CONTAINS InterPro DOMAIN/s: Rad21/Rec8 like protein, C-terminal (InterPro:IPR006909); BEST Arabidopsis thaliana protein match is: sister chromatid cohesion 1 protein 4 (TAIR:AT5G16270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68400 : 112.0) no description available & (reliability: 278.0) & (original description: Putative rad21, Description = UPF0183 protein C16orf70-like protein, PFAM = PF04825;PF04824)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00110_230182-237507' '(at3g53440 : 139.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), MYB-like (InterPro:IPR017877); Has 4379 Blast hits to 2740 proteins in 256 species: Archae - 0; Bacteria - 81; Metazoa - 1861; Fungi - 384; Plants - 214; Viruses - 25; Other Eukaryotes - 1814 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative PGSC0003DMG400000839, Description = At3g53440, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00128_120045-124530' '(at2g37440 : 323.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell, root; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: CVP2 like 1 (TAIR:AT2G32010.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35786 : 252.0) no description available & (gnl|cdd|47467 : 217.0) no description available & (reliability: 646.0) & (original description: Putative At2g37440, Description = DNAse I-like superfamily protein, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00144_252452-257483' '(at1g74350 : 915.0) Intron maturase, type II family protein; FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity; INVOLVED IN: RNA-dependent DNA replication, RNA splicing; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot, shoot apex, stem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Intron maturase, type II (InterPro:IPR000442), RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477); BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase) (TAIR:AT5G04050.1); Has 3669 Blast hits to 3587 proteins in 1202 species: Archae - 32; Bacteria - 2608; Metazoa - 4; Fungi - 43; Plants - 874; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (gnl|cdd|73157 : 131.0) no description available & (p38478|ymf40_marpo : 80.9) Hypothetical 57.7 kDa protein in 18S rRNA intron 1 (ORF 502) - Marchantia polymorpha (Liverwort) & (reliability: 1830.0) & (original description: Putative Os06g0634100, Description = Os06g0634100 protein, PFAM = PF01348;PF00078)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00180_541-5401' '(at1g11190 : 457.0) Encodes a bifunctional nuclease that acts on both RNA and DNA involved in nucleic acid degradation to facilitate nucleotide and phosphate recovery during senescence. It has mismatch-specific endonuclease activity with wide recognition of single base mismatches as well as the ability to cleave indel types of mismatches (heteroduplexes with loops).; bifunctional nuclease i (BFN1); FUNCTIONS IN: T/G mismatch-specific endonuclease activity, endoribonuclease activity, producing 5'-phosphomonoesters, single-stranded DNA specific endodeoxyribonuclease activity, nucleic acid binding; INVOLVED IN: DNA catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C/P1 nuclease, core (InterPro:IPR008947), S1/P1 nuclease (InterPro:IPR003154); BEST Arabidopsis thaliana protein match is: endonuclease 4 (TAIR:AT4G21585.1); Has 701 Blast hits to 698 proteins in 200 species: Archae - 0; Bacteria - 187; Metazoa - 0; Fungi - 98; Plants - 121; Viruses - 4; Other Eukaryotes - 291 (source: NCBI BLink). & (gnl|cdd|85937 : 407.0) no description available & (reliability: 914.0) & (original description: Putative tbn1, Description = Putative endonuclease, PFAM = PF02265)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00189_692234-703212' '(at4g01020 : 1847.0) helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related; FUNCTIONS IN: in 6 functions; LOCATED IN: intracellular, chloroplast; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, RING-type, conserved site (InterPro:IPR017907), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), K Homology (InterPro:IPR004087), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, C2H2-type (InterPro:IPR007087), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related (TAIR:AT5G10370.1); Has 13197 Blast hits to 12409 proteins in 1676 species: Archae - 4; Bacteria - 3384; Metazoa - 3503; Fungi - 1989; Plants - 1444; Viruses - 760; Other Eukaryotes - 2113 (source: NCBI BLink). & (gnl|cdd|36140 : 624.0) no description available & (gnl|cdd|31829 : 477.0) no description available & (reliability: 3694.0) & (original description: Putative At4g01020, Description = ATP-dependent RNA helicase DEAH11, chloroplastic, PFAM = PF00271;PF01485;PF04408;PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00215_663804-671947' '(at5g17690 : 187.0) Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state.; TERMINAL FLOWER 2 (TFL2); CONTAINS InterPro DOMAIN/s: Chromo domain subgroup (InterPro:IPR017984), Chromo domain-like (InterPro:IPR016197), Chromo shadow, subgroup (InterPro:IPR018125), Chromo domain (InterPro:IPR000953); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q339w7|lhp1_orysa : 155.0) Probable protein LIKE HETEROCHROMATIN PROTEIN1 (LHP1) - Oryza sativa (Rice) & (reliability: 374.0) & (original description: Putative LHP1, Description = Chromo domain protein LHP1, PFAM = PF00385)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00218_104091-108256' '(at5g46920 : 1110.0) Intron maturase, type II family protein; FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity; INVOLVED IN: RNA-dependent DNA replication, RNA splicing; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Intron maturase, type II (InterPro:IPR000442), RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477); BEST Arabidopsis thaliana protein match is: Intron maturase, type II family protein (TAIR:AT1G30010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|73157 : 153.0) no description available & (gnl|cdd|39965 : 102.0) no description available & (p38456|ymf11_marpo : 97.1) Hypothetical 83.1 kDa protein in COB-ATPA intergenic region (ORF 732) - Marchantia polymorpha (Liverwort) & (reliability: 2220.0) & (original description: Putative At5g46920, Description = Intron maturase, type II family protein, PFAM = PF01348)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00338_169753-229092' '(at5g63920 : 527.0) Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates.; topoisomerase 3alpha (TOP3A); FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase type I activity, DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: in 7 processes; LOCATED IN: chromosome; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA topoisomerase, type IA, zn finger (InterPro:IPR013498), DNA topoisomerase, type IA, core (InterPro:IPR000380), DNA topoisomerase, type IA, domain 2 (InterPro:IPR003601), DNA topoisomerase, type IA, DNA-binding (InterPro:IPR003602), DNA topoisomerase, type IA, central (InterPro:IPR013497), Zinc finger, GRF-type (InterPro:IPR010666), DNA topoisomerase, type IA, central region, subdomain 3 (InterPro:IPR013826), Toprim domain, subgroup (InterPro:IPR006154), DNA topoisomerase, type IA, central region, subdomain 1 (InterPro:IPR013824), Toprim domain (InterPro:IPR006171), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: DNA topoisomerase, type IA, core (TAIR:AT2G32000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37167 : 229.0) no description available & (gnl|cdd|73184 : 121.0) no description available & (reliability: 1054.0) & (original description: Putative TOP3A, Description = DNA topoisomerase, PFAM = PF01396;PF01131;PF00098;PF00098;PF06839)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00351_574649-578635' '(at5g65630 : 281.0) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE7 show some resistance to agrobacterium-mediated root transformation.; global transcription factor group E7 (GTE7); CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: global transcription factor group E2 (TAIR:AT5G10550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36687 : 201.0) no description available & (gnl|cdd|47625 : 99.6) no description available & (reliability: 538.0) & (original description: Putative GTE7, Description = Transcription factor GTE7, PFAM = PF00439;PF17035)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00366_151923-169742' '(at1g67320 : 653.0) DNA primase, large subunit family; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication, synthesis of RNA primer; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA primase, large subunit, eukaryotic (InterPro:IPR016558), DNA primase, large subunit, eukaryotic/archaeal (InterPro:IPR007238). & (gnl|cdd|37478 : 380.0) no description available & (gnl|cdd|86545 : 229.0) no description available & (reliability: 1306.0) & (original description: Putative prim2, Description = DNA primase large subunit, PFAM = PF04104)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00369_337479-355768' '(at5g27680 : 412.0) DNA helicase; RECQ helicase SIM (RECQSIM); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RECQ helicase L2 (TAIR:AT1G31360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35572 : 257.0) no description available & (gnl|cdd|30860 : 212.0) no description available & (reliability: 824.0) & (original description: Putative recQ, Description = ATP-dependent DNA helicase RecQ, PFAM = PF00270;PF00271;PF16124)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00457_741114-743866' '(gnl|cdd|36687 : 119.0) no description available & (at1g06230 : 108.0) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE4 show some resistance to agrobacterium-mediated root transformation.; global transcription factor group E4 (GTE4); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA mediated transformation, cell cycle, root development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G17790.1). & (gnl|cdd|47625 : 90.7) no description available & (reliability: 212.0) & (original description: Putative GTE2, Description = Transcription factor GTE4, PFAM = PF00439)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00496_19789-23048' '(at5g02820 : 664.0) Involved in the patterning and shape of leaf trichomes. Encodes the DNA topoisomerase VI SPO11-3, involved in endoreduplication; ROOT HAIRLESS 2 (RHL2); CONTAINS InterPro DOMAIN/s: Spo11/DNA topoisomerase VI, subunit A, N-terminal (InterPro:IPR013049), DNA topoisomerase VI, subunit A (InterPro:IPR004085), Spo11/DNA topoisomerase VI, subunit A (InterPro:IPR002815); BEST Arabidopsis thaliana protein match is: Spo11/DNA topoisomerase VI, subunit A protein (TAIR:AT3G13170.1); Has 936 Blast hits to 932 proteins in 314 species: Archae - 223; Bacteria - 16; Metazoa - 170; Fungi - 119; Plants - 152; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink). & (gnl|cdd|38006 : 420.0) no description available & (gnl|cdd|81366 : 280.0) no description available & (reliability: 1328.0) & (original description: Putative TOP6A, Description = DNA topoisomerase 6 subunit A, PFAM = PF04406)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00542_125056-137636' '(at5g37630 : 959.0) EMBRYO DEFECTIVE 2656 (EMB2656); FUNCTIONS IN: binding; INVOLVED IN: mitotic chromosome condensation, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 333 Blast hits to 316 proteins in 147 species: Archae - 0; Bacteria - 4; Metazoa - 113; Fungi - 138; Plants - 47; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|37236 : 149.0) no description available & (gnl|cdd|34815 : 113.0) no description available & (reliability: 1918.0) & (original description: Putative EMB2656, Description = Embryo defective protein 2656, PFAM = PF12719)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00567_379369-384828' '(at5g45400 : 733.0) RPA70C; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication factor A, C-terminal (InterPro:IPR013955), Replication factor-a protein 1 Rpa1 (InterPro:IPR004591), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Zinc finger, CCHC-type (InterPro:IPR001878), Replication factor-A protein 1, N-terminal (InterPro:IPR007199); BEST Arabidopsis thaliana protein match is: Replication factor-A protein 1-related (TAIR:AT4G19130.1); Has 1172 Blast hits to 939 proteins in 244 species: Archae - 33; Bacteria - 8; Metazoa - 314; Fungi - 240; Plants - 399; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|72071 : 219.0) no description available & (reliability: 1466.0) & (original description: Putative RPA1C, Description = Replication protein A 70 kDa DNA-binding subunit C, PFAM = PF00098;PF00098;PF00098;PF16900;PF01336;PF04057;PF08646)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00573_4729-14513' '(at1g20960 : 1114.0) embryo defective 1507 (emb1507); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1). & (gnl|cdd|36169 : 1014.0) no description available & (gnl|cdd|31397 : 482.0) no description available & (reliability: 2228.0) & (original description: Putative brr2, Description = U5 small nuclear ribonucleoprotein 200 kDa helicase, PFAM = PF02889;PF02889;PF00271;PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00621_423462-427291' '(at3g21530 : 468.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT2G48030.1); Has 250 Blast hits to 250 proteins in 102 species: Archae - 0; Bacteria - 169; Metazoa - 0; Fungi - 2; Plants - 38; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (reliability: 936.0) & (original description: Putative At2g48030, Description = At2g48030, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00635_24594-31223' '(at2g03390 : 398.0) uvrB/uvrC motif-containing protein; FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: nucleotide-excision repair; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Hemimethylated DNA-binding domain (InterPro:IPR011722), UvrB/UvrC protein (InterPro:IPR001943). & (gnl|cdd|87631 : 114.0) no description available & (reliability: 796.0) & (original description: Putative At2g03390, Description = Putative uncharacterized protein At2g03390, PFAM = PF08755;PF02151)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00646_568797-590146' '(at4g15570 : 963.0) Similar to yeast Sen1 (splicing endonuclease 1)helicase protein. Involved in female gametophyte development.; MAGATAMA 3 (MAA3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen-pistil interaction, pollen tube guidance, embryo sac development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G16800.1); Has 6636 Blast hits to 6003 proteins in 1303 species: Archae - 237; Bacteria - 1922; Metazoa - 1300; Fungi - 1113; Plants - 639; Viruses - 442; Other Eukaryotes - 983 (source: NCBI BLink). & (gnl|cdd|37012 : 318.0) no description available & (gnl|cdd|31309 : 184.0) no description available & (reliability: 1926.0) & (original description: Putative MAA3, Description = Probable helicase MAGATAMA 3, PFAM = PF13086;PF13086;PF13087)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00653_44242-59531' '(at5g23520 : 226.0) smr (Small MutS Related) domain-containing protein; CONTAINS InterPro DOMAIN/s: Smr protein/MutS2 C-terminal (InterPro:IPR002625), Domain of unknown function DUF1771 (InterPro:IPR013899); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative PGSC0003DMG400023332, Description = Putative uncharacterized protein Sb06g017530, PFAM = PF01713;PF08590)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00661_99060-107430' '(at1g10520 : 701.0) DNA polymerase lambda (POLL); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity, catalytic activity, nucleotidyltransferase activity; INVOLVED IN: DNA repair, DNA replication; LOCATED IN: intracellular; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), DNA-directed DNA polymerase, family X, beta-like (InterPro:IPR002008), DNA-directed DNA polymerase, family X, beta-like, N-terminal (InterPro:IPR010996), DNA polymerase lambda, fingers domain (InterPro:IPR018944), DNA polymerase family X, binding site (InterPro:IPR019843), DNA-directed DNA polymerase X (InterPro:IPR002054), BRCT (InterPro:IPR001357), DNA polymerase X (InterPro:IPR022312); Has 1887 Blast hits to 1879 proteins in 557 species: Archae - 50; Bacteria - 688; Metazoa - 533; Fungi - 209; Plants - 50; Viruses - 7; Other Eukaryotes - 350 (source: NCBI BLink). & (gnl|cdd|47789 : 288.0) no description available & (gnl|cdd|37745 : 237.0) no description available & (reliability: 1402.0) & (original description: Putative poll, Description = DNA pol lambda, PFAM = PF10391;PF14716;PF00533;PF14792;PF14791)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00672_442202-473562' '(at2g28290 : 1169.0) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (gnl|cdd|35607 : 850.0) no description available & (q7g8y3|isw2_orysa : 350.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|30899 : 337.0) no description available & (reliability: 2338.0) & (original description: Putative snf21, Description = Chromatin structure-remodeling complex subunit snf21, PFAM = PF00176;PF14619;PF00271)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00690_566438-572249' '(at2g42320 : 493.0) nucleolar protein gar2-related; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 986.0) & (original description: Putative A20, Description = Putative uncharacterized protein A20, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00751_148666-157864' '(at3g50360 : 205.0) centrin2 (CEN2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: centrin 2 (TAIR:AT4G37010.2); Has 32825 Blast hits to 20606 proteins in 1695 species: Archae - 1; Bacteria - 190; Metazoa - 13563; Fungi - 7187; Plants - 7027; Viruses - 2; Other Eukaryotes - 4855 (source: NCBI BLink). & (gnl|cdd|35251 : 163.0) no description available & (p05434|catr_chlre : 158.0) Caltractin (Centrin) (20 kDa calcium-binding protein) - Chlamydomonas reinhardtii & (gnl|cdd|34727 : 115.0) no description available & (reliability: 410.0) & (original description: Putative CTN, Description = Caltractin, PFAM = PF13499;PF13405)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00752_70654-72956' '(at5g09600 : 87.0) Encodes one of the membrane anchor subunits of the mitochondrial respiratory complex II. The protein is encoded by the nuclear genome but is imported into the mitochondrion. There are two genes that encode this protein, the other is SDH3-2.; succinate dehydrogenase 3-1 (SDH3-1); CONTAINS InterPro DOMAIN/s: Succinate dehydrogenase/Fumarate reductase, transmembrane subunit (InterPro:IPR000701); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 3-2 (TAIR:AT4G32210.1). & (reliability: 174.0) & (original description: Putative sdh3, Description = Succinate dehydrogenase subunit 3, PFAM = PF01127)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00788_39287-58045' '(at4g31570 : 1028.0) CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24460.1); Has 194354 Blast hits to 66887 proteins in 3244 species: Archae - 3688; Bacteria - 38556; Metazoa - 84828; Fungi - 17265; Plants - 10589; Viruses - 805; Other Eukaryotes - 38623 (source: NCBI BLink). & (gnl|cdd|35383 : 101.0) no description available & (reliability: 2056.0) & (original description: Putative BnaA01g34800D, Description = BnaA01g34800D protein, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00797_1903019-1925649' '(at2g13370 : 1969.0) chromatin remodeling 5 (CHR5); FUNCTIONS IN: chromatin binding, helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 38529 Blast hits to 28045 proteins in 2467 species: Archae - 189; Bacteria - 9973; Metazoa - 8887; Fungi - 6205; Plants - 2508; Viruses - 447; Other Eukaryotes - 10320 (source: NCBI BLink). & (gnl|cdd|35605 : 1110.0) no description available & (q7g8y3|isw2_orysa : 435.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|30899 : 308.0) no description available & (reliability: 3938.0) & (original description: Putative CHR5, Description = Protein CHROMATIN REMODELING 5, PFAM = PF00271;PF00385;PF00176;PF13907)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00821_1093744-1151573' '(at3g47490 : 231.0) HNH endonuclease; FUNCTIONS IN: endonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HNH endonuclease (InterPro:IPR002711); BEST Arabidopsis thaliana protein match is: HNH endonuclease domain-containing protein (TAIR:AT1G18680.1). & (reliability: 462.0) & (original description: Putative At3g47490, Description = HNH endonuclease, PFAM = PF01844)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00842_3151-5561' '(at5g60230 : 152.0) putative subunit of tRNA splicing endonuclease; splicing endonuclease 2 (SEN2); CONTAINS InterPro DOMAIN/s: tRNA intron endonuclease, catalytic domain-like (InterPro:IPR006677), tRNA-intron endonuclease (InterPro:IPR006676), Endonuclease TnsA, N-terminal/resolvase Hjc/tRNA endonuclease, C-terminal (InterPro:IPR011856), tRNA intron endonuclease, N-terminal (InterPro:IPR006678); BEST Arabidopsis thaliana protein match is: splicing endonuclease 1 (TAIR:AT3G45590.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5z6b1|sen2_orysa : 110.0) Probable tRNA-splicing endonuclease subunit Sen2 (EC 3.1.27.9) (tRNA-intron endonuclease Sen2) - Oryza sativa (Rice) & (gnl|cdd|39883 : 108.0) no description available & (reliability: 304.0) & (original description: Putative SEN1, Description = tRNA-splicing endonuclease subunit Sen2-2, PFAM = PF01974;PF02778)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00869_740149-748799' '(at3g23890 : 1566.0) Encodes a topoisomerase II that is highly expressed in young seedlings. The protein is localized in the nucleus and gene expression levels are increased in proliferative tissues.; topoisomerase II (TOPII); CONTAINS InterPro DOMAIN/s: DNA topoisomerase, type IIA, subunit A/C-terminal (InterPro:IPR002205), DNA topoisomerase, type IIA, conserved site (InterPro:IPR018522), DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta (InterPro:IPR013758), DNA topoisomerase, type IIA, subunit B, domain 2 (InterPro:IPR013506), DNA topoisomerase, type IIA, subunit A, alpha-helical (InterPro:IPR013757), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA topoisomerase, type IIA, subunit B/N-terminal, alpha-beta (InterPro:IPR013759), DNA topoisomerase, type IIA, subunit B/N-terminal (InterPro:IPR001241), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA topoisomerase II, eukaryotic-type (InterPro:IPR001154), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), DNA topoisomerase, type IIA, central (InterPro:IPR013760); BEST Arabidopsis thaliana protein match is: DNA GYRASE B2 (TAIR:AT5G04130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o24308|top2_pea : 1509.0) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II) (PsTopII) - Pisum sativum (Garden pea) & (gnl|cdd|35576 : 1054.0) no description available & (gnl|cdd|47740 : 633.0) no description available & (reliability: 3132.0) & (original description: Putative TOP2, Description = DNA topoisomerase 2, PFAM = PF16898;PF00521;PF01751;PF02518;PF00204)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00873_108687-118317' '(at1g03750 : 1152.0) switch 2 (SWI2); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1); Has 20033 Blast hits to 14398 proteins in 1655 species: Archae - 120; Bacteria - 5954; Metazoa - 4199; Fungi - 4321; Plants - 1927; Viruses - 177; Other Eukaryotes - 3335 (source: NCBI BLink). & (gnl|cdd|35608 : 649.0) no description available & (gnl|cdd|30899 : 270.0) no description available & (q7g8y3|isw2_orysa : 127.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2304.0) & (original description: Putative SWI2, Description = Switch 2, PFAM = PF00176;PF00271)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf00984_148103-154333' '(at2g01900 : 536.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: hypocotyl, sepal, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT2G37440.1); Has 2320 Blast hits to 2027 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 735; Fungi - 544; Plants - 769; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink). & (gnl|cdd|35786 : 259.0) no description available & (gnl|cdd|47467 : 202.0) no description available & (reliability: 1072.0) & (original description: Putative IP5P9, Description = Type IV inositol polyphosphate 5-phosphatase 9, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01005_459274-506273' '(at2g14050 : 968.0) minichromosome maintenance 9 (MCM9); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: DNA-dependent DNA replication initiation, DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208); BEST Arabidopsis thaliana protein match is: minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT1G44900.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35698 : 566.0) no description available & (gnl|cdd|31434 : 412.0) no description available & (q43704|mcm3_maize : 207.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1936.0) & (original description: Putative MCM9, Description = Probable DNA helicase MCM9, PFAM = PF00493;PF17207)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01033_71841-74564' '(at1g14900 : 80.1) Encodes a protein belonging to the subgroup of HMGA (high mobility group A) proteins that interact with A/T-rich stretches of DNA.; high mobility group A (HMGA); FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent, nucleosome assembly; LOCATED IN: cytosol, nuclear chromatin, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), A.T hook-like (InterPro:IPR020478), AT hook, DNA-binding motif (InterPro:IPR017956), High mobility group, HMG-I/HMG-Y (InterPro:IPR000116), Histone H1/H5 (InterPro:IPR005818); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT3G18035.1); Has 1377 Blast hits to 1228 proteins in 223 species: Archae - 0; Bacteria - 119; Metazoa - 428; Fungi - 179; Plants - 544; Viruses - 9; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative HMGA, Description = HMG-Y-related protein A, PFAM = PF00538;PF02178;PF02178;PF02178)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01061_6068-18355' '(at5g06310 : 250.0) Encodes AtPOT1b. Note on nomenclature: different names have been given to Arabidopsis POT-like genes (Kuchar and Fajkus, 2004; Shakirov et al, 2005; Tani and Murata, 2005). According to a unifying nomenclature (Surovtseva et al, 2007), At2g05210 (previously named AtPOT1) is designated AtPOT1a, while At5g06310 (previously named AtPOT2) is designated AtPOT1b.; protection of telomeres 1b (AtPOT1b); FUNCTIONS IN: DNA binding; INVOLVED IN: telomere maintenance; LOCATED IN: nuclear chromosome, telomeric region; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Telomere end binding protein (InterPro:IPR011564); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G05210.3); Has 198 Blast hits to 197 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 0; Plants - 83; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|39954 : 139.0) no description available & (gnl|cdd|72969 : 114.0) no description available & (reliability: 456.0) & (original description: Putative PGSC0003DMG400021171, Description = Protection of telomeres 1 protein, PFAM = PF02765)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01072_169384-179928' '(at5g41150 : 1153.0) Confers resistance to UV radiation. Homolog of the human xeroderma pigmentosum group F DNA repair and yeast Rad1 proteins; ULTRAVIOLET HYPERSENSITIVE 1 (UVH1); Has 503 Blast hits to 463 proteins in 204 species: Archae - 16; Bacteria - 0; Metazoa - 188; Fungi - 168; Plants - 53; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (gnl|cdd|35663 : 766.0) no description available & (gnl|cdd|32131 : 137.0) no description available & (reliability: 2306.0) & (original description: Putative rad1, Description = DNA repair endonuclease UVH1, PFAM = PF02732)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01075_160854-170228' '(at1g73875 : 438.0) DNAse I-like superfamily protein; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT3G18500.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37549 : 164.0) no description available & (gnl|cdd|34836 : 105.0) no description available & (reliability: 876.0) & (original description: Putative DXPS3, Description = Carbon catabolite repressor protein 4 like 3, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01075_161441-169689' '(at1g73875 : 399.0) DNAse I-like superfamily protein; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT3G18500.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37549 : 146.0) no description available & (gnl|cdd|34836 : 97.3) no description available & (reliability: 798.0) & (original description: Putative DXPS3, Description = Carbon catabolite repressor protein 4 like 3, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01076_451822-459540' '(at1g01370 : 129.0) Encodes a centromere-identifying protein histone H3 variant. Localized at centromeres in both mitotic and meiotic cells.; HTR12; FUNCTIONS IN: DNA binding; INVOLVED IN: double fertilization forming a zygote and endosperm; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: male-gamete-specific histone H3 (TAIR:AT1G19890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36956 : 118.0) no description available & (gnl|cdd|47735 : 115.0) no description available & (q5dwi3|h3_marpo : 88.6) Histone H3 - Marchantia polymorpha (Liverwort) & (reliability: 258.0) & (original description: Putative HTR12, Description = Histone H3-like centromeric protein HTR12, PFAM = PF00125)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01085_589105-604270' '(gnl|cdd|35552 : 401.0) no description available & (gnl|cdd|30859 : 384.0) no description available & (at1g55150 : 288.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 254.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 540.0) & (original description: Putative rhlE, Description = ATP-dependent RNA helicase RhlE, PFAM = PF00271;PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01124_2743415-2754254' '(at5g41150 : 1111.0) Confers resistance to UV radiation. Homolog of the human xeroderma pigmentosum group F DNA repair and yeast Rad1 proteins; ULTRAVIOLET HYPERSENSITIVE 1 (UVH1); Has 503 Blast hits to 463 proteins in 204 species: Archae - 16; Bacteria - 0; Metazoa - 188; Fungi - 168; Plants - 53; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (gnl|cdd|35663 : 766.0) no description available & (gnl|cdd|32131 : 138.0) no description available & (reliability: 2222.0) & (original description: Putative UVH1, Description = DNA repair endonuclease UVH1, PFAM = PF02732)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01190_17401-26894' '(at2g16440 : 1137.0) MINICHROMOSOME MAINTENANCE 4 (MCM4); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 4 (InterPro:IPR008047); BEST Arabidopsis thaliana protein match is: minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT5G44635.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35699 : 860.0) no description available & (gnl|cdd|47677 : 619.0) no description available & (q43704|mcm3_maize : 301.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 2274.0) & (original description: Putative MCM4, Description = DNA replication licensing factor MCM4, PFAM = PF14551;PF17207;PF00493)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01249_3771-8761' '(at2g01900 : 410.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: hypocotyl, sepal, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT2G37440.1); Has 2320 Blast hits to 2027 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 735; Fungi - 544; Plants - 769; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink). & (gnl|cdd|35786 : 261.0) no description available & (gnl|cdd|47467 : 223.0) no description available & (reliability: 820.0) & (original description: Putative BnaAnng33950D, Description = BnaAnng33950D protein, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01281_206566-216003' '(gnl|cdd|37891 : 738.0) no description available & (at5g67630 : 709.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: DNA helicase activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TIP49, C-terminal (InterPro:IPR010339), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G49830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|31417 : 586.0) no description available & (reliability: 1418.0) & (original description: Putative RUVBL2, Description = RuvB-like 2, PFAM = PF06068)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01281_765315-795336' '(at3g06980 : 562.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RH39 (TAIR:AT4G09730.1); Has 36871 Blast hits to 36254 proteins in 2997 species: Archae - 517; Bacteria - 17572; Metazoa - 5953; Fungi - 4324; Plants - 2343; Viruses - 14; Other Eukaryotes - 6148 (source: NCBI BLink). & (gnl|cdd|35552 : 301.0) no description available & (gnl|cdd|30859 : 263.0) no description available & (p35683|if4a_orysa : 103.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (reliability: 1124.0) & (original description: Putative Os03g0108600, Description = DEAD-box ATP-dependent RNA helicase 50, PFAM = PF00270;PF00271)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01284_448792-501472' '(at5g04895 : 1770.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: double-stranded RNA binding, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, intracellular; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding (InterPro:IPR001159), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G48650.2); Has 12653 Blast hits to 8846 proteins in 1499 species: Archae - 0; Bacteria - 5024; Metazoa - 2916; Fungi - 1709; Plants - 1004; Viruses - 56; Other Eukaryotes - 1944 (source: NCBI BLink). & (gnl|cdd|36138 : 917.0) no description available & (gnl|cdd|31829 : 260.0) no description available & (reliability: 3540.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF00270;PF00271;PF00035;PF07717;PF04408)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01341_230806-249418' '(at5g44750 : 982.0) Homologous to Y-family DNA polymerases, contains BRCT domain. Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS).; REV1; FUNCTIONS IN: DNA-directed DNA polymerase activity; INVOLVED IN: DNA repair, response to UV-B, response to DNA damage stimulus; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, Y-family, little finger domain (InterPro:IPR017961), DNA-repair protein, UmuC-like (InterPro:IPR001126), DNA-repair protein, UmuC-like, N-terminal (InterPro:IPR017963), DNA repair protein, Rev1 (InterPro:IPR012112), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: DNA/RNA polymerases superfamily protein (TAIR:AT1G49980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|48487 : 527.0) no description available & (gnl|cdd|37304 : 481.0) no description available & (reliability: 1964.0) & (original description: Putative REV1, Description = DNA repair protein REV1, PFAM = PF11799;PF00817;PF16589)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01382_431314-450462' '(at5g22010 : 874.0) replication factor C1 (RFC1); FUNCTIONS IN: DNA clamp loader activity, nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: DNA replication; LOCATED IN: DNA replication factor C complex, intracellular; CONTAINS InterPro DOMAIN/s: DNA replication factor RFC1, C-terminal (InterPro:IPR013725), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), DNA replication factor C, large subunit (InterPro:IPR012178), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G04730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37179 : 276.0) no description available & (gnl|cdd|81320 : 216.0) no description available & (reliability: 1748.0) & (original description: Putative RFC1, Description = Replication factor C subunit 1, PFAM = PF00533;PF00004;PF08519)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01382_520131-531083' '(at4g15850 : 649.0) plant DEAD box-like RNA helicase.; RNA helicase 1 (RH1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT4G16630.1); Has 38711 Blast hits to 38056 proteins in 2969 species: Archae - 603; Bacteria - 19125; Metazoa - 5736; Fungi - 4393; Plants - 2535; Viruses - 13; Other Eukaryotes - 6306 (source: NCBI BLink). & (gnl|cdd|35571 : 432.0) no description available & (gnl|cdd|30859 : 215.0) no description available & (q41382|rh7_spiol : 115.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 1298.0) & (original description: Putative RH1, Description = DEAD-box ATP-dependent RNA helicase 1, PFAM = PF00271;PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01402_58520-61467' '(at2g47450 : 365.0) A component of the chloroplast signal recognition particle pathway that is involved in LHCP targeting. It is downregulated in response to high light. It recognizes the DPLG motif in Lhcb1.; CHAOS (CAO); FUNCTIONS IN: chromatin binding; INVOLVED IN: response to high light intensity, protein import into chloroplast thylakoid membrane; LOCATED IN: chloroplast thylakoid membrane, chloroplast, signal recognition particle, chloroplast targeting, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Chromo domain-like (InterPro:IPR016197), Chromo domain (InterPro:IPR000953), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing protein 2 (TAIR:AT4G35450.5); Has 25373 Blast hits to 13489 proteins in 848 species: Archae - 87; Bacteria - 2575; Metazoa - 11620; Fungi - 2006; Plants - 1049; Viruses - 137; Other Eukaryotes - 7899 (source: NCBI BLink). & (q8lsq2|sr43c_orysa : 311.0) Probable signal recognition particle 43 kDa protein, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|29261 : 86.3) no description available & (reliability: 730.0) & (original description: Putative CAO, Description = Signal recognition particle 43 kDa protein, chloroplastic, PFAM = PF12796;PF00385)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01440_177928-191518' '(at5g06260 : 542.0) TLD-domain containing nucleolar protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TLDc (InterPro:IPR006571), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT4G34070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37768 : 403.0) no description available & (gnl|cdd|47882 : 167.0) no description available & (reliability: 1084.0) & (original description: Putative BnaA10g30570D, Description = BnaA10g30570D protein, PFAM = PF07534)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01460_166368-172864' '(at3g55490 : 201.0) GINS complex protein; CONTAINS InterPro DOMAIN/s: GINS complex, subunit Psf3 (InterPro:IPR010492), GINS complex (InterPro:IPR021151); BEST Arabidopsis thaliana protein match is: GINS complex protein (TAIR:AT1G19080.2); Has 336 Blast hits to 336 proteins in 155 species: Archae - 0; Bacteria - 0; Metazoa - 141; Fungi - 114; Plants - 49; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|36322 : 135.0) no description available & (gnl|cdd|87078 : 130.0) no description available & (reliability: 402.0) & (original description: Putative TTN10, Description = At1g19080, PFAM = PF05916)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01479_180813-199232' '(at1g65810 : 660.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: egg cell, seed; EXPRESSED DURING: E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G65780.1). & (gnl|cdd|37012 : 418.0) no description available & (gnl|cdd|31309 : 163.0) no description available & (reliability: 1320.0) & (original description: Putative At5g37160, Description = Similarity to DNA helicase, PFAM = PF13086;PF13087;PF00580)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01479_185244-199244' '(at1g65810 : 659.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: egg cell, seed; EXPRESSED DURING: E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G65780.1). & (gnl|cdd|37012 : 419.0) no description available & (gnl|cdd|31309 : 164.0) no description available & (reliability: 1318.0) & (original description: Putative At5g37140, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF13086;PF13087;PF00580)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01494_512165-537230' '(at1g10520 : 707.0) DNA polymerase lambda (POLL); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity, catalytic activity, nucleotidyltransferase activity; INVOLVED IN: DNA repair, DNA replication; LOCATED IN: intracellular; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), DNA-directed DNA polymerase, family X, beta-like (InterPro:IPR002008), DNA-directed DNA polymerase, family X, beta-like, N-terminal (InterPro:IPR010996), DNA polymerase lambda, fingers domain (InterPro:IPR018944), DNA polymerase family X, binding site (InterPro:IPR019843), DNA-directed DNA polymerase X (InterPro:IPR002054), BRCT (InterPro:IPR001357), DNA polymerase X (InterPro:IPR022312); Has 1887 Blast hits to 1879 proteins in 557 species: Archae - 50; Bacteria - 688; Metazoa - 533; Fungi - 209; Plants - 50; Viruses - 7; Other Eukaryotes - 350 (source: NCBI BLink). & (gnl|cdd|47789 : 291.0) no description available & (gnl|cdd|37745 : 237.0) no description available & (reliability: 1414.0) & (original description: Putative poll, Description = DNA polymerase lambda, PFAM = PF10391;PF14792;PF14791;PF00533;PF14716)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01494_562806-571457' '(at1g59990 : 590.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G40700.1); Has 57869 Blast hits to 34290 proteins in 2955 species: Archae - 517; Bacteria - 30307; Metazoa - 8550; Fungi - 6961; Plants - 3872; Viruses - 6; Other Eukaryotes - 7656 (source: NCBI BLink). & (gnl|cdd|35554 : 310.0) no description available & (gnl|cdd|30859 : 112.0) no description available & (reliability: 1180.0) & (original description: Putative rh22, Description = DEA(D/H)-box RNA helicase family protein, PFAM = PF00271;PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01513_35336-40849' '(at4g12740 : 467.0) HhH-GPD base excision DNA repair family protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), DNA glycosylase (InterPro:IPR011257), NUDIX hydrolase domain (InterPro:IPR000086), HhH-GPD domain (InterPro:IPR003265); Has 55833 Blast hits to 29061 proteins in 2861 species: Archae - 372; Bacteria - 10631; Metazoa - 17750; Fungi - 4523; Plants - 1695; Viruses - 834; Other Eukaryotes - 20028 (source: NCBI BLink). & (gnl|cdd|37668 : 370.0) no description available & (gnl|cdd|31387 : 315.0) no description available & (reliability: 934.0) & (original description: Putative Mutyh, Description = Adenine DNA glycosylase, PFAM = PF14815;PF00730)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01538_16751-23122' '(at5g17690 : 165.0) Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state.; TERMINAL FLOWER 2 (TFL2); CONTAINS InterPro DOMAIN/s: Chromo domain subgroup (InterPro:IPR017984), Chromo domain-like (InterPro:IPR016197), Chromo shadow, subgroup (InterPro:IPR018125), Chromo domain (InterPro:IPR000953); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q339w7|lhp1_orysa : 144.0) Probable protein LIKE HETEROCHROMATIN PROTEIN1 (LHP1) - Oryza sativa (Rice) & (reliability: 330.0) & (original description: Putative LHP1, Description = Chromo domain protein LHP1, PFAM = PF00385)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01634_554198-570034' '(at2g41460 : 517.0) apurinic endonuclease-redox protein. It functions as an apurinic/apyrimidinic class II endonuclease, and is involved in DNA repair.; apurinic endonuclease-redox protein (ARP); CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), AP endonuclease, family 1, binding site (InterPro:IPR020847), Exodeoxyribonuclease III xth (InterPro:IPR004808), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase (TAIR:AT3G60950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31052 : 260.0) no description available & (p51173|apea_dicdi : 221.0) DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) (Class II apurinic/apyrimidinic(AP)-endonuclease) - Dictyostelium discoideum (Slime mold) & (gnl|cdd|36508 : 215.0) no description available & (reliability: 1034.0) & (original description: Putative ARP, Description = DNA-(apurinic or apyrimidinic site) lyase, chloroplastic, PFAM = PF02037;PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01664_223974-234202' '(at5g66130 : 480.0) Encodes a homolog to yeast RAD17. Involved in the regulation of DNA damage repair and homologous recombination. Mutant has increased sensitivity to MMS and increased telomere lengths.; RADIATION SENSITIVE 17 (ATRAD17); INVOLVED IN: regulation of DNA repair; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Checkpoint protein Rad24 (InterPro:IPR004582); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G77620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37181 : 265.0) no description available & (gnl|cdd|66861 : 156.0) no description available & (reliability: 960.0) & (original description: Putative RAD17, Description = Cell cycle checkpoint protein RAD17, PFAM = PF03215)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01697_1942926-1947037' '(at5g46580 : 984.0) pentatricopeptide (PPR) repeat-containing protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT4G16390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 129.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1968.0) & (original description: Putative At5g46580, Description = Pentatricopeptide repeat-containing protein At5g46580, chloroplastic, PFAM = PF13041;PF13812;PF17177)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01716_87586-92065' '(at4g29910 : 518.0) Origin Recognition Complex subunit 5. Involved in the initiation of DNA replication. Interacts strongly with all ORC subunits.; origin recognition complex protein 5 (ORC5); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 5 (InterPro:IPR020796); Has 287 Blast hits to 283 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 140; Fungi - 92; Plants - 43; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|37754 : 326.0) no description available & (reliability: 1036.0) & (original description: Putative ORC5, Description = Origin of replication complex subunit 5, PFAM = PF13191;PF14630)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01727_736310-829496' '(at1g18800 : 279.0) Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP1. Bind histones Histone2A and Histone2B and associate with chromatin in vivo.; NAP1-related protein 2 (NRP2); FUNCTIONS IN: chromatin binding, histone binding, DNA binding; INVOLVED IN: cell proliferation, cell differentiation, nucleosome assembly, lateral root formation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: NAP1-related protein 1 (TAIR:AT1G74560.2); Has 4380 Blast hits to 3595 proteins in 373 species: Archae - 7; Bacteria - 141; Metazoa - 1827; Fungi - 714; Plants - 336; Viruses - 93; Other Eukaryotes - 1262 (source: NCBI BLink). & (gnl|cdd|36721 : 175.0) no description available & (gnl|cdd|85149 : 138.0) no description available & (reliability: 558.0) & (original description: Putative nrp, Description = Protein SET, PFAM = PF00956;PF00956)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01739_221380-240126' '(at5g44800 : 1640.0) chromatin remodeling 4 (CHR4); FUNCTIONS IN: in 6 functions; INVOLVED IN: chromatin assembly or disassembly, regulation of transcription; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Homeodomain-related (InterPro:IPR012287), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 35726 Blast hits to 27895 proteins in 2283 species: Archae - 135; Bacteria - 6476; Metazoa - 12546; Fungi - 6155; Plants - 3074; Viruses - 328; Other Eukaryotes - 7012 (source: NCBI BLink). & (gnl|cdd|35605 : 604.0) no description available & (q7g8y3|isw2_orysa : 345.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|30899 : 305.0) no description available & (reliability: 3280.0) & (original description: Putative chd4, Description = CHD3-type chromatin-remodeling factor PICKLE, PFAM = PF06465;PF00176;PF00628;PF00385;PF00385;PF00271)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01749_258043-288608' '(at2g28290 : 1144.0) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (gnl|cdd|35607 : 849.0) no description available & (q7g8y3|isw2_orysa : 347.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|30899 : 338.0) no description available & (reliability: 2288.0) & (original description: Putative snf21, Description = Chromatin structure-remodeling complex subunit snf21, PFAM = PF14619;PF00271;PF00176)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01749_262583-266312' '(at2g28290 : 113.0) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative CHR3, Description = Chromatin structure-remodeling complex subunit snf21, PFAM = PF14619)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01764_244388-253386' '(at3g18600 : 714.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 44310 Blast hits to 43105 proteins in 3082 species: Archae - 753; Bacteria - 22440; Metazoa - 6214; Fungi - 4682; Plants - 2500; Viruses - 12; Other Eukaryotes - 7709 (source: NCBI BLink). & (gnl|cdd|35563 : 637.0) no description available & (gnl|cdd|30859 : 329.0) no description available & (p46942|db10_nicsy : 181.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1428.0) & (original description: Putative RH51, Description = DEAD-box ATP-dependent RNA helicase 51, PFAM = PF13959;PF00271;PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01777_45258-50298' '(at2g19480 : 299.0) This gene is predicted to encode a nucleosome assembly protein. Plant lines expressing an RNAi construct directed against this gene show a reduction in agrobacterium-mediated root transformation.; nucleosome assembly protein 1;2 (NAP1;2); CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: nucleosome assembly protein 1;3 (TAIR:AT5G56950.1). & (gnl|cdd|36720 : 231.0) no description available & (gnl|cdd|85149 : 217.0) no description available & (reliability: 598.0) & (original description: Putative 1, Description = Nucleosome assembly protein 1, PFAM = PF00956)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01782_392457-415925' '(at3g09100 : 563.0) mRNA capping enzyme family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422), ATP dependent DNA ligase, central (InterPro:IPR012310), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme, C-terminal (InterPro:IPR013846); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT5G01290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37597 : 264.0) no description available & (gnl|cdd|85390 : 179.0) no description available & (reliability: 1126.0) & (original description: Putative At3g09100, Description = mRNA capping enzyme family protein, PFAM = PF01331;PF03919;PF00782)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01782_407200-410068' '(at5g01290 : 181.0) mRNA capping enzyme family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, protein tyrosine/serine/threonine phosphatase activity, mRNA guanylyltransferase activity, polynucleotide 5'-phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, mRNA processing, mRNA capping, dephosphorylation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme, C-terminal (InterPro:IPR013846); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT3G09100.2); Has 888 Blast hits to 860 proteins in 246 species: Archae - 0; Bacteria - 2; Metazoa - 276; Fungi - 241; Plants - 79; Viruses - 71; Other Eukaryotes - 219 (source: NCBI BLink). & (gnl|cdd|37597 : 158.0) no description available & (reliability: 362.0) & (original description: Putative pco130460, Description = mRNA-capping enzyme, PFAM = PF00782)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01789_205180-213363' '(at2g07690 : 1117.0) Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin.; MINICHROMOSOME MAINTENANCE 5 (MCM5); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin, nucleus, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 5 (InterPro:IPR008048); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1). & (gnl|cdd|35702 : 986.0) no description available & (gnl|cdd|47677 : 586.0) no description available & (q43704|mcm3_maize : 289.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 2234.0) & (original description: Putative MCM5, Description = DNA replication licensing factor MCM5, PFAM = PF00493;PF17207;PF14551)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01802_202968-217119' '(o48653|dpola_orysa : 1785.0) DNA polymerase alpha catalytic subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (at5g67100 : 1706.0) Encodes the putative catalytic subunit of the DNA polymerase alpha. Interacts with genes involved in chromatin-mediated cellular memory. ICU2 genetically interacts with TERMINAL FLOWER2, the ortholog of HETEROCHROMATIN PROTEIN1 of animals and yeasts, and with the Polycomb group (PcG) gene CURLY LEAF. A number of regulatory genes were derepressed in the icu2-1 mutant, including genes associated with flowering time, floral meristem, and floral organ identity. Mutant has curled, involute leaves and causes early flowering.; INCURVATA2 (ICU2); FUNCTIONS IN: DNA-directed DNA polymerase activity; INVOLVED IN: negative regulation of flower development, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134), Zinc finger, DNA-directed DNA polymerase, family B, alpha (InterPro:IPR015088), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B, pol2 (InterPro:IPR004578); BEST Arabidopsis thaliana protein match is: DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases (TAIR:AT5G63960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36188 : 1250.0) no description available & (gnl|cdd|84550 : 378.0) no description available & (reliability: 3412.0) & (original description: Putative POLA1, Description = DNA polymerase, PFAM = PF00136;PF08996;PF03104;PF12254)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01826_802747-810851' '(at3g48425 : 546.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), Exodeoxyribonuclease III xth (InterPro:IPR004808); BEST Arabidopsis thaliana protein match is: apurinic endonuclease-redox protein (TAIR:AT2G41460.1); Has 5913 Blast hits to 5912 proteins in 1998 species: Archae - 119; Bacteria - 3923; Metazoa - 218; Fungi - 82; Plants - 109; Viruses - 0; Other Eukaryotes - 1462 (source: NCBI BLink). & (gnl|cdd|36508 : 215.0) no description available & (gnl|cdd|31052 : 166.0) no description available & (p51173|apea_dicdi : 124.0) DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) (Class II apurinic/apyrimidinic(AP)-endonuclease) - Dictyostelium discoideum (Slime mold) & (reliability: 1092.0) & (original description: Putative APE1L, Description = DNA-(apurinic or apyrimidinic site) lyase, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01831_314963-360214' '(at5g57160 : 783.0) Encodes the Arabidopsis orthologue of the yeast and mammalian DNA ligase IV. Involved in the repair of DNA damage but, unlike in yeast, not required for T-DNA integration. Interacts with the Arabidopsis homologue of XRCC4.; ATLIG4; FUNCTIONS IN: protein binding, DNA ligase (ATP) activity; INVOLVED IN: double-strand break repair, response to X-ray, response to DNA damage stimulus; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059), ATP-dependent DNA ligase (InterPro:IPR000977), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 7656 Blast hits to 6618 proteins in 1076 species: Archae - 317; Bacteria - 1869; Metazoa - 2250; Fungi - 907; Plants - 304; Viruses - 214; Other Eukaryotes - 1795 (source: NCBI BLink). & (q7x7e9|dnl4_orysa : 689.0) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (gnl|cdd|36184 : 507.0) no description available & (gnl|cdd|80824 : 181.0) no description available & (reliability: 1566.0) & (original description: Putative LIG4, Description = DNA ligase, PFAM = PF01068;PF04679;PF04675)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01852_331002-334819' '(at1g62670 : 409.0) Encodes a pentatricopeptide repeat protein required for 5' end processing of nad9 and cox3 mRNAs in mitochondria.; rna processing factor 2 (RPF2); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G62930.1); Has 71790 Blast hits to 15506 proteins in 316 species: Archae - 6; Bacteria - 84; Metazoa - 1433; Fungi - 1460; Plants - 65974; Viruses - 0; Other Eukaryotes - 2833 (source: NCBI BLink). & (q76c99|rf1_orysa : 290.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 794.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF13041;PF13041;PF13041;PF13041;PF13041;PF01535;PF01535)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01888_763768-773265' '(at1g21690 : 567.0) embryo defective 1968 (EMB1968); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: DNA replication factor C complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), Replication factor C (InterPro:IPR013748); BEST Arabidopsis thaliana protein match is: replication factor C 2 (TAIR:AT1G63160.1). & (gnl|cdd|36207 : 372.0) no description available & (gnl|cdd|80670 : 318.0) no description available & (reliability: 1134.0) & (original description: Putative RFC2, Description = Replication factor C subunit 2, PFAM = PF08542;PF00004)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01977_91980-98965' '(at1g01370 : 122.0) Encodes a centromere-identifying protein histone H3 variant. Localized at centromeres in both mitotic and meiotic cells.; HTR12; FUNCTIONS IN: DNA binding; INVOLVED IN: double fertilization forming a zygote and endosperm; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: male-gamete-specific histone H3 (TAIR:AT1G19890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36956 : 116.0) no description available & (gnl|cdd|47735 : 113.0) no description available & (q5dwi3|h3_marpo : 87.0) Histone H3 - Marchantia polymorpha (Liverwort) & (reliability: 244.0) & (original description: Putative HTR12, Description = Centromeric histone, PFAM = PF00125)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf01978_128084-136081' '(at1g18800 : 221.0) Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP1. Bind histones Histone2A and Histone2B and associate with chromatin in vivo.; NAP1-related protein 2 (NRP2); FUNCTIONS IN: chromatin binding, histone binding, DNA binding; INVOLVED IN: cell proliferation, cell differentiation, nucleosome assembly, lateral root formation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: NAP1-related protein 1 (TAIR:AT1G74560.2); Has 4380 Blast hits to 3595 proteins in 373 species: Archae - 7; Bacteria - 141; Metazoa - 1827; Fungi - 714; Plants - 336; Viruses - 93; Other Eukaryotes - 1262 (source: NCBI BLink). & (gnl|cdd|36721 : 143.0) no description available & (gnl|cdd|85149 : 139.0) no description available & (reliability: 442.0) & (original description: Putative nrp, Description = Protein SET, PFAM = PF00956)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02012_75524-91416' '(at1g70070 : 1503.0) Allelic to ISE2(increased size exclusion limit of plasmodesmata 2). Mutants maintain dilated plasmodesmata at the embryonic torpedo stage.; EMBRYO DEFECTIVE 25 (EMB25); FUNCTIONS IN: RNA helicase activity, ATP-dependent helicase activity; INVOLVED IN: posttranscriptional gene silencing, plasmodesmata-mediated intercellular transport, embryo development ending in seed dormancy; LOCATED IN: stress granule, chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT3G46960.1); Has 21396 Blast hits to 12786 proteins in 1473 species: Archae - 1027; Bacteria - 4600; Metazoa - 5457; Fungi - 2724; Plants - 1158; Viruses - 307; Other Eukaryotes - 6123 (source: NCBI BLink). & (gnl|cdd|36165 : 889.0) no description available & (gnl|cdd|34219 : 503.0) no description available & (reliability: 3006.0) & (original description: Putative ISE2, Description = DExH-box ATP-dependent RNA helicase DExH15 chloroplastic, PFAM = PF00271;PF00270;PF08148)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02015_518129-526956' '(at2g23840 : 318.0) HNH endonuclease; FUNCTIONS IN: endonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HNH nuclease (InterPro:IPR003615), HNH endonuclease (InterPro:IPR002711); Has 4176 Blast hits to 4176 proteins in 656 species: Archae - 6; Bacteria - 1679; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 29; Other Eukaryotes - 2425 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative mcrA, Description = HNH endonuclease family protein, PFAM = PF14279)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02030_113634-130146' '(at1g79950 : 1055.0) RAD3-like DNA-binding helicase protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of transcription, DNA-dependent, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD2 (InterPro:IPR010614), DEAD-like helicase, N-terminal (InterPro:IPR014001), Helicase, superfamily 1/2, ATP-binding domain, DinG/Rad3-type (InterPro:IPR014013), Helicase-like, DEXD box c2 type (InterPro:IPR006554), DNA helicase (DNA repair), Rad3 type (InterPro:IPR013020), Helicase, ATP-dependent, c2 type (InterPro:IPR006555), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: RAD3-like DNA-binding helicase protein (TAIR:AT1G20720.1); Has 3149 Blast hits to 2661 proteins in 831 species: Archae - 223; Bacteria - 987; Metazoa - 718; Fungi - 431; Plants - 207; Viruses - 6; Other Eukaryotes - 577 (source: NCBI BLink). & (gnl|cdd|36347 : 727.0) no description available & (gnl|cdd|31392 : 235.0) no description available & (reliability: 2110.0) & (original description: Putative Os01g0592900, Description = Os01g0592900 protein, PFAM = PF06733;PF13307)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02031_701500-707940' '(at2g19480 : 390.0) This gene is predicted to encode a nucleosome assembly protein. Plant lines expressing an RNAi construct directed against this gene show a reduction in agrobacterium-mediated root transformation.; nucleosome assembly protein 1;2 (NAP1;2); CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: nucleosome assembly protein 1;3 (TAIR:AT5G56950.1). & (gnl|cdd|36720 : 294.0) no description available & (gnl|cdd|85149 : 265.0) no description available & (reliability: 780.0) & (original description: Putative NAP1, Description = Nucleosome assembly protein 1, PFAM = PF00956)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02031_956762-963341' '(at2g19490 : 516.0) recA DNA recombination family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, SOS response, DNA recombination, DNA metabolic process; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination/repair protein RecA, conserved site (InterPro:IPR020584), DNA recombination and repair protein RecA (InterPro:IPR013765), DNA recombination/repair protein RecA, monomer-monomer interface (InterPro:IPR020587); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G32920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|82947 : 460.0) no description available & (gnl|cdd|36646 : 196.0) no description available & (reliability: 1032.0) & (original description: Putative recA, Description = Protein RecA, PFAM = PF00154)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02045_602681-607378' '(at1g12300 : 106.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G12775.1); Has 69404 Blast hits to 15469 proteins in 318 species: Archae - 6; Bacteria - 74; Metazoa - 1057; Fungi - 1243; Plants - 64555; Viruses - 0; Other Eukaryotes - 2469 (source: NCBI BLink). & (p93263|mete_mescr : 92.4) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Mesembryanthemum crystallinum (Common ice pl & (gnl|cdd|37474 : 87.8) no description available & (reliability: 200.0) & (original description: Putative met1, Description = 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, PFAM = PF13041;PF01717;PF01535)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02100_19942-23411' '(at1g19480 : 325.0) DNA glycosylase superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G75230.1); Has 4597 Blast hits to 4597 proteins in 1093 species: Archae - 62; Bacteria - 2351; Metazoa - 1; Fungi - 142; Plants - 80; Viruses - 0; Other Eukaryotes - 1961 (source: NCBI BLink). & (gnl|cdd|37129 : 260.0) no description available & (gnl|cdd|30471 : 161.0) no description available & (reliability: 628.0) & (original description: Putative PHYPADRAFT_217626, Description = Predicted protein, PFAM = PF00730)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02105_25809-32345' '(at1g31360 : 166.0) Encodes a (d)NTP-dependent 3'->5' DNA helicase. This protein can also disrupt D loop structures and may mediate branch migration of Holliday junctions when tested in vitro. The unwinding activity of the enzyme depends on the presence of divalent cations (Mg2+, Mn2+, or Ca2+, but not Zn2+).(d)NTPs are also required with ATP and dATP supporting the greatest amount of DNA unwinding in vitro.; RECQ helicase L2 (RECQL2); CONTAINS InterPro DOMAIN/s: RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: DNA helicase (RECQl4A) (TAIR:AT1G10930.1); Has 27972 Blast hits to 27909 proteins in 2839 species: Archae - 320; Bacteria - 17784; Metazoa - 2771; Fungi - 1804; Plants - 1361; Viruses - 12; Other Eukaryotes - 3920 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative RQL2, Description = ATP-dependent DNA helicase Q-like 2, PFAM = PF00570)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02107_273703-277772' '(at1g30010 : 954.0) Intron maturase, type II family protein; FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity; INVOLVED IN: RNA-dependent DNA replication, RNA splicing; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Intron maturase, type II (InterPro:IPR000442), RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477); BEST Arabidopsis thaliana protein match is: Intron maturase, type II family protein (TAIR:AT5G46920.1); Has 4269 Blast hits to 4093 proteins in 800 species: Archae - 33; Bacteria - 3762; Metazoa - 5; Fungi - 54; Plants - 249; Viruses - 3; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|73157 : 163.0) no description available & (p38456|ymf11_marpo : 124.0) Hypothetical 83.1 kDa protein in COB-ATPA intergenic region (ORF 732) - Marchantia polymorpha (Liverwort) & (gnl|cdd|39965 : 104.0) no description available & (reliability: 1908.0) & (original description: Putative Sb01g044780, Description = Putative uncharacterized protein Sb01g044780, PFAM = PF00078;PF01348)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02190_430006-440192' '(at2g43900 : 1488.0) Endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: inositol-polyphosphate 5-phosphatase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: sperm cell, male gametophyte, flower, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Endonuclease/exonuclease/phosphatase family protein (TAIR:AT1G05630.2); Has 8064 Blast hits to 7016 proteins in 490 species: Archae - 18; Bacteria - 518; Metazoa - 2458; Fungi - 805; Plants - 729; Viruses - 32; Other Eukaryotes - 3504 (source: NCBI BLink). & (gnl|cdd|35786 : 221.0) no description available & (gnl|cdd|47467 : 217.0) no description available & (reliability: 2976.0) & (original description: Putative IP5P12, Description = Type I inositol polyphosphate 5-phosphatase 12, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02195_389756-393446' '(at3g50390 : 482.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G26490.1); Has 33178 Blast hits to 17374 proteins in 678 species: Archae - 38; Bacteria - 5184; Metazoa - 12049; Fungi - 7688; Plants - 3936; Viruses - 0; Other Eukaryotes - 4283 (source: NCBI BLink). & (gnl|cdd|29257 : 159.0) no description available & (gnl|cdd|35495 : 104.0) no description available & (reliability: 926.0) & (original description: Putative wdrp, Description = Transducin/WD40 repeat-like superfamily protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02197_141692-147580' '(at1g77470 : 543.0) Encodes a protein with high homology to the Replication Factor C, Subunit 3 (RFC3) of yeast and other eukaryotes. rfc3 mutants are hypersensitive to salicylic acid and exhibit enhanced induction of PR genes and resistance against virulent oomycete Hyaloperonospora arabidopsidis Noco2. The enhanced pathogen resistance in the mutant is NPR1-independent.; replication factor C subunit 3 (RFC3); FUNCTIONS IN: in 6 functions; INVOLVED IN: negative regulation of defense response; LOCATED IN: DNA replication factor C complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Replication factor C (InterPro:IPR013748), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921); BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA) (TAIR:AT1G21690.1); Has 17584 Blast hits to 17541 proteins in 2810 species: Archae - 637; Bacteria - 9895; Metazoa - 902; Fungi - 991; Plants - 392; Viruses - 88; Other Eukaryotes - 4679 (source: NCBI BLink). & (gnl|cdd|36208 : 425.0) no description available & (gnl|cdd|80670 : 311.0) no description available & (reliability: 1086.0) & (original description: Putative RFC3, Description = Replication factor C subunit 3, PFAM = PF08542;PF00004)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02230_391208-450920' '(q9lre6|dpod1_orysa : 1789.0) DNA polymerase delta catalytic subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (at5g63960 : 1749.0) EMBRYO DEFECTIVE 2780 (EMB2780); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: DNA replication, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B, pol2 (InterPro:IPR004578); BEST Arabidopsis thaliana protein match is: recovery protein 3 (TAIR:AT1G67500.2). & (gnl|cdd|36187 : 1569.0) no description available & (gnl|cdd|30766 : 582.0) no description available & (reliability: 3498.0) & (original description: Putative POLD1, Description = DNA polymerase delta catalytic subunit, PFAM = PF00136;PF14260;PF03104)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02266_120656-156136' '(at3g48900 : 581.0) single-stranded DNA endonuclease family protein; FUNCTIONS IN: chromatin binding, DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair, chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), Chromo domain-like (InterPro:IPR016197), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Chromo domain (InterPro:IPR000953), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G01880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37730 : 212.0) no description available & (gnl|cdd|29030 : 205.0) no description available & (reliability: 1162.0) & (original description: Putative GEN2, Description = Flap endonuclease GEN-like 2, PFAM = PF00867;PF00752)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02306_220409-228305' '(at5g49010 : 211.0) Similar to the SLD5 component of GINS complex, which in other organism was shown to be involved in the initiation of DNA replication.; SYNTHETIC LETHALITY WITH DPB11-1 5 (SLD5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: DNA-dependent DNA replication initiation; LOCATED IN: GINS complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GINS complex, subunit Sld5 (InterPro:IPR008591), GINS complex (InterPro:IPR021151); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69439 : 134.0) no description available & (gnl|cdd|38386 : 123.0) no description available & (reliability: 422.0) & (original description: Putative SLD5, Description = DNA replication complex GINS protein SLD5, PFAM = PF05916)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02320_74043-75728' '(at1g20960 : 387.0) embryo defective 1507 (emb1507); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1). & (gnl|cdd|36169 : 322.0) no description available & (gnl|cdd|86167 : 132.0) no description available & (reliability: 774.0) & (original description: Putative brr2, Description = U5 small nuclear ribonucleoprotein 200 kDa helicase, PFAM = PF02889)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02334_155388-160570' '(at1g63990 : 530.0) Encodes AtSPO11-2, one of the three Arabidopsis homologues of the archaeal DNA topoisomerase VIA subunit (topo VIA). Required for meiotic recombination. Plants homozygous for atspo11-2 exhibit a severe sterility phenotype. Both male and female meiosis are severely disrupted in the atspo11-2 mutant, and this is associated with severe defects in synapsis during the first meiotic division and reduced meiotic recombination. AtSPO11-1 and AtSPO11-2 have overlapping functions (i.e. both required for meiotic recombination) whereas AtSPO11-3 functions in DNA replication. Required for double-strand break induction.; sporulation 11-2 (SPO11-2); FUNCTIONS IN: DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, catalytic activity, ATP binding; INVOLVED IN: in 11 processes; LOCATED IN: chromosome; CONTAINS InterPro DOMAIN/s: Spo11/DNA topoisomerase VI, subunit A, N-terminal (InterPro:IPR013049), Spo11/DNA topoisomerase VI, subunit A (InterPro:IPR002815); BEST Arabidopsis thaliana protein match is: Spo11/DNA topoisomerase VI, subunit A protein (TAIR:AT5G02820.1); Has 890 Blast hits to 889 proteins in 304 species: Archae - 214; Bacteria - 14; Metazoa - 169; Fungi - 107; Plants - 162; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|38006 : 331.0) no description available & (gnl|cdd|31883 : 198.0) no description available & (reliability: 1060.0) & (original description: Putative spo11, Description = Meiotic recombination protein SPO11-2, PFAM = PF04406)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02392_31053-35120' '(at5g65630 : 290.0) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE7 show some resistance to agrobacterium-mediated root transformation.; global transcription factor group E7 (GTE7); CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: global transcription factor group E2 (TAIR:AT5G10550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36687 : 200.0) no description available & (gnl|cdd|47625 : 97.7) no description available & (reliability: 542.0) & (original description: Putative GTE4, Description = Transcription factor GTE4, PFAM = PF17035;PF00439)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02402_117299-147547' '(at4g00660 : 813.0) RNAhelicase-like 8 (RH8); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: viral reproduction, virus-host interaction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G45810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35547 : 779.0) no description available & (gnl|cdd|30859 : 364.0) no description available & (p35683|if4a_orysa : 287.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (reliability: 1626.0) & (original description: Putative RH8, Description = DEAD-box ATP-dependent RNA helicase 8, PFAM = PF00271;PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02405_603195-612901' '(at3g53110 : 501.0) Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4); FUNCTIONS IN: RNA helicase activity, RNA-dependent ATPase activity, ATP-dependent helicase activity; INVOLVED IN: poly(A)+ mRNA export from nucleus, response to cold, response to heat, response to abscisic acid stimulus; LOCATED IN: nuclear envelope, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1); Has 40925 Blast hits to 40635 proteins in 3033 species: Archae - 702; Bacteria - 21081; Metazoa - 5720; Fungi - 4311; Plants - 2419; Viruses - 28; Other Eukaryotes - 6664 (source: NCBI BLink). & (gnl|cdd|35553 : 407.0) no description available & (gnl|cdd|30859 : 223.0) no description available & (p41380|if4a3_nicpl : 172.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1002.0) & (original description: Putative DBP5, Description = LOS4, PFAM = PF00271;PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02423_345956-367322' '(at5g16690 : 576.0) Origin Recognition Complex subunit 3. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with all ORC subunits except ORC1b.; origin recognition complex subunit 3 (ORC3); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 3, N-terminal (InterPro:IPR010748), Origin recognition complex, subunit 3 (InterPro:IPR020795); Has 319 Blast hits to 284 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 161; Fungi - 89; Plants - 45; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|70496 : 234.0) no description available & (gnl|cdd|37749 : 110.0) no description available & (reliability: 1152.0) & (original description: Putative ORC3, Description = Origin of replication complex subunit 3, PFAM = PF07034;PF07034)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02444_10406-101005' '(at1g35530 : 728.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: in 6 functions; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36020.1). & (gnl|cdd|35575 : 284.0) no description available & (gnl|cdd|31308 : 284.0) no description available & (reliability: 1456.0) & (original description: Putative TCM_036398, Description = DEAD/DEAH box RNA helicase family protein, putative isoform 2, PFAM = PF00271)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02451_499003-606110' '(at5g63920 : 1118.0) Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates.; topoisomerase 3alpha (TOP3A); FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase type I activity, DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: in 7 processes; LOCATED IN: chromosome; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA topoisomerase, type IA, zn finger (InterPro:IPR013498), DNA topoisomerase, type IA, core (InterPro:IPR000380), DNA topoisomerase, type IA, domain 2 (InterPro:IPR003601), DNA topoisomerase, type IA, DNA-binding (InterPro:IPR003602), DNA topoisomerase, type IA, central (InterPro:IPR013497), Zinc finger, GRF-type (InterPro:IPR010666), DNA topoisomerase, type IA, central region, subdomain 3 (InterPro:IPR013826), Toprim domain, subgroup (InterPro:IPR006154), DNA topoisomerase, type IA, central region, subdomain 1 (InterPro:IPR013824), Toprim domain (InterPro:IPR006171), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: DNA topoisomerase, type IA, core (TAIR:AT2G32000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37167 : 496.0) no description available & (gnl|cdd|30896 : 342.0) no description available & (reliability: 2236.0) & (original description: Putative TOP3A, Description = DNA topoisomerase 3-alpha, PFAM = PF01751;PF01396;PF06839;PF00098;PF00098;PF01131;PF01131)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02486_354227-367818' '(at5g26680 : 603.0) 5'-3' exonuclease family protein; FUNCTIONS IN: 5'-3' exonuclease activity, DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: XPG conserved site (InterPro:IPR019974), XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, N-terminal (InterPro:IPR002421), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G29630.2); Has 3563 Blast hits to 3243 proteins in 839 species: Archae - 284; Bacteria - 855; Metazoa - 643; Fungi - 727; Plants - 266; Viruses - 42; Other Eukaryotes - 746 (source: NCBI BLink). & (q9sxq6|fen1a_orysa : 581.0) Flap endonuclease 1a (EC 3.1.-.-) (OsFEN-1a) - Oryza sativa (Rice) & (gnl|cdd|37730 : 437.0) no description available & (gnl|cdd|29030 : 387.0) no description available & (reliability: 1206.0) & (original description: Putative FEN1, Description = Flap endonuclease 1, PFAM = PF00867;PF00752)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02544_24228-29121' '(at1g11800 : 395.0) endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), Zinc finger, RanBP2-type (InterPro:IPR001876); Has 386 Blast hits to 366 proteins in 96 species: Archae - 0; Bacteria - 14; Metazoa - 170; Fungi - 14; Plants - 104; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (gnl|cdd|37967 : 254.0) no description available & (reliability: 790.0) & (original description: Putative Os12g0414900, Description = Endonuclease/Exonuclease/phosphatase family protein, expressed, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02558_33900-39423' '(at1g77180 : 343.0) Encodes a putative transcriptional factor. Shows transcriptional activator activity in yeast. Involved in response to abscisic acid, salt and osmotic stress.; SKIP; CONTAINS InterPro DOMAIN/s: SKI-interacting protein, SKIP (InterPro:IPR017862), SKI-interacting protein SKIP, SNW domain (InterPro:IPR004015). & (gnl|cdd|37652 : 301.0) no description available & (gnl|cdd|66416 : 180.0) no description available & (reliability: 686.0) & (original description: Putative puff, Description = Puff-specific protein Bx42, PFAM = PF02731)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02627_12982-23537' '(at3g20540 : 1159.0) polymerase gamma 1 (POLGAMMA1); FUNCTIONS IN: 3'-5' exonuclease activity, DNA-directed DNA polymerase activity, DNA binding, nucleic acid binding; INVOLVED IN: DNA replication, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: male gametophyte; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA polymerase A domain (InterPro:IPR002298), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: polymerase gamma 2 (TAIR:AT1G50840.1). & (gnl|cdd|31092 : 252.0) no description available & (gnl|cdd|36168 : 113.0) no description available & (reliability: 2318.0) & (original description: Putative POLIA, Description = DNA polymerase I A, chloroplastic/mitochondrial, PFAM = PF01612;PF00476)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02693_246369-256020' '(at4g02060 : 1182.0) Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin.; PROLIFERA (PRL); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 7 (InterPro:IPR008050); BEST Arabidopsis thaliana protein match is: minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT5G44635.1). & (gnl|cdd|35703 : 1038.0) no description available & (gnl|cdd|47677 : 643.0) no description available & (q43704|mcm3_maize : 275.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 2364.0) & (original description: Putative MCM7, Description = DNA replication licensing factor MCM7, PFAM = PF00493;PF17207;PF14551)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02752_502737-521035' '(at3g06400 : 1652.0) Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature.; chromatin-remodeling protein 11 (CHR11); FUNCTIONS IN: in 7 functions; INVOLVED IN: cell growth, embryo sac development; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), SLIDE (InterPro:IPR015195), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2). & (q7g8y3|isw2_orysa : 1627.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35606 : 1094.0) no description available & (gnl|cdd|84584 : 334.0) no description available & (reliability: 3286.0) & (original description: Putative CHR17, Description = ISWI chromatin-remodeling complex ATPase CHR17, PFAM = PF00176;PF00271;PF09111;PF09110)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02793_1174733-1188294' '(at3g58560 : 893.0) DNAse I-like superfamily protein; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT3G58580.1); Has 1372 Blast hits to 1328 proteins in 220 species: Archae - 0; Bacteria - 20; Metazoa - 540; Fungi - 247; Plants - 315; Viruses - 0; Other Eukaryotes - 250 (source: NCBI BLink). & (gnl|cdd|35839 : 347.0) no description available & (gnl|cdd|34836 : 173.0) no description available & (reliability: 1786.0) & (original description: Putative At3g58560, Description = Endonuclease/exonuclease/phosphatase, PFAM = PF15801;PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02793_1728417-1750996' '(at2g42120 : 687.0) DNA polymerase delta small subunit (POLD2); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9lre5|dpod2_orysa : 616.0) DNA polymerase delta small subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (gnl|cdd|37943 : 483.0) no description available & (gnl|cdd|67651 : 176.0) no description available & (reliability: 1374.0) & (original description: Putative POLD2, Description = DNA polymerase delta small subunit, PFAM = PF04042)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02819_426588-431903' '(at5g32440 : 211.0) Ubiquitin system component Cue protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1). & (reliability: 422.0) & (original description: Putative At5g32440, Description = Ubiquitin system component Cue protein, PFAM = PF02845)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02829_921379-926208' '(at3g63240 : 743.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: CVP2 like 1 (TAIR:AT2G32010.2); Has 2363 Blast hits to 2040 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 816; Fungi - 600; Plants - 662; Viruses - 0; Other Eukaryotes - 285 (source: NCBI BLink). & (gnl|cdd|35786 : 227.0) no description available & (gnl|cdd|47467 : 189.0) no description available & (reliability: 1486.0) & (original description: Putative IP5P4, Description = Type I inositol polyphosphate 5-phosphatase 4, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02831_611011-617805' '(at5g56950 : 317.0) Encodes a member of a small gene family of proteins with similarity to nucleosome assembly proteins.May function in nucleotide excision repair. Loss of function mutations have no obvious visible phenotypes but do seem to affect transcription of NER related genes.; nucleosome assembly protein 1;3 (NAP1;3); CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: nucleosome assembly protein1;1 (TAIR:AT4G26110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36720 : 295.0) no description available & (gnl|cdd|85149 : 257.0) no description available & (reliability: 634.0) & (original description: Putative NAP1, Description = Nucleosome assembly protein 1, PFAM = PF00956)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02846_65920-72328' '(at2g31270 : 261.0) Encodes a cyclin-dependent protein kinase. Involved in nuclear DNA replication and plastid division. Located in nucleus and chloroplast.; homolog of yeast CDT1 A (CDT1A); FUNCTIONS IN: protein binding, cyclin-dependent protein kinase activity; INVOLVED IN: chloroplast organization, DNA replication; LOCATED IN: chloroplast, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA replication factor CDT1-like (InterPro:IPR014939); BEST Arabidopsis thaliana protein match is: homolog of yeast CDT1 B homolog of yeast CDT1 B (TAIR:AT3G54710.1); Has 1317 Blast hits to 1078 proteins in 213 species: Archae - 6; Bacteria - 83; Metazoa - 600; Fungi - 201; Plants - 122; Viruses - 41; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|39959 : 161.0) no description available & (gnl|cdd|87677 : 124.0) no description available & (reliability: 522.0) & (original description: Putative , Description = , PFAM = PF08839;PF16679)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02853_514370-523441' '(at4g24790 : 545.0) AAA-type ATPase family protein; FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication; LOCATED IN: DNA polymerase III complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), DNA polymerase III, subunit gamma/ tau (InterPro:IPR012763); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G14460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36207 : 293.0) no description available & (gnl|cdd|32641 : 249.0) no description available & (reliability: 1090.0) & (original description: Putative At4g24790, Description = Protein STICHEL-like 2, PFAM = PF13177)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02887_105419-117897' '(at1g09815 : 127.0) polymerase delta 4 (POLD4); FUNCTIONS IN: DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase delta, subunit 4 (InterPro:IPR007218); Has 212 Blast hits to 212 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 52; Fungi - 86; Plants - 65; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative POLD4, Description = At1g09815, PFAM = PF04081)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf02927_1025244-1039436' '(at3g58560 : 924.0) DNAse I-like superfamily protein; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT3G58580.1); Has 1372 Blast hits to 1328 proteins in 220 species: Archae - 0; Bacteria - 20; Metazoa - 540; Fungi - 247; Plants - 315; Viruses - 0; Other Eukaryotes - 250 (source: NCBI BLink). & (gnl|cdd|35839 : 352.0) no description available & (gnl|cdd|34836 : 180.0) no description available & (reliability: 1848.0) & (original description: Putative CCR4-2, Description = Carbon catabolite repressor protein 4 homolog 2, PFAM = PF03372;PF15801)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03006_604073-614612' '(at3g57060 : 1758.0) binding; FUNCTIONS IN: binding; INVOLVED IN: mitosis, chromosome condensation; LOCATED IN: nucleus, condensin complex; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Non-SMC condensin subunit, XCAP-D2/Cnd1 (InterPro:IPR007673), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: binding (TAIR:AT4G15890.1). & (gnl|cdd|35635 : 1015.0) no description available & (gnl|cdd|34701 : 351.0) no description available & (reliability: 3516.0) & (original description: Putative CPD1501, Description = Chromosome condensation complex protein, PFAM = PF12765;PF12717;PF12922)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03100_168240-179697' '(at5g32440 : 211.0) Ubiquitin system component Cue protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1). & (reliability: 422.0) & (original description: Putative BnaC07g09870D, Description = BnaC07g09870D protein, PFAM = PF02845)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03224_991541-999694' '(at5g32440 : 190.0) Ubiquitin system component Cue protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1). & (reliability: 380.0) & (original description: Putative Os08g0314200, Description = Os08g0314200 protein, PFAM = PF02845)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03236_421279-436627' '(at1g18800 : 255.0) Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP1. Bind histones Histone2A and Histone2B and associate with chromatin in vivo.; NAP1-related protein 2 (NRP2); FUNCTIONS IN: chromatin binding, histone binding, DNA binding; INVOLVED IN: cell proliferation, cell differentiation, nucleosome assembly, lateral root formation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: NAP1-related protein 1 (TAIR:AT1G74560.2); Has 4380 Blast hits to 3595 proteins in 373 species: Archae - 7; Bacteria - 141; Metazoa - 1827; Fungi - 714; Plants - 336; Viruses - 93; Other Eukaryotes - 1262 (source: NCBI BLink). & (gnl|cdd|36721 : 172.0) no description available & (gnl|cdd|85149 : 129.0) no description available & (reliability: 510.0) & (original description: Putative nfa103, Description = Nucleosome/chromatin assembly factor A, PFAM = PF00956;PF00956)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03283_569822-577365' '(at3g10140 : 418.0) RECA homolog 3 (RECA3); FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, SOS response, DNA recombination, DNA metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination and repair protein RecA (InterPro:IPR013765), DNA recombination/repair protein RecA, monomer-monomer interface (InterPro:IPR020587); BEST Arabidopsis thaliana protein match is: recA DNA recombination family protein (TAIR:AT2G19490.1); Has 19406 Blast hits to 19280 proteins in 5632 species: Archae - 329; Bacteria - 14407; Metazoa - 165; Fungi - 231; Plants - 211; Viruses - 99; Other Eukaryotes - 3964 (source: NCBI BLink). & (gnl|cdd|29984 : 381.0) no description available & (gnl|cdd|36646 : 150.0) no description available & (reliability: 836.0) & (original description: Putative recA, Description = Protein RecA, PFAM = PF00154)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03293_53151-65692' '(at3g58560 : 893.0) DNAse I-like superfamily protein; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT3G58580.1); Has 1372 Blast hits to 1328 proteins in 220 species: Archae - 0; Bacteria - 20; Metazoa - 540; Fungi - 247; Plants - 315; Viruses - 0; Other Eukaryotes - 250 (source: NCBI BLink). & (gnl|cdd|35839 : 344.0) no description available & (gnl|cdd|34836 : 173.0) no description available & (reliability: 1786.0) & (original description: Putative CCR4-1, Description = Carbon catabolite repressor protein 4 homolog 1, PFAM = PF15801;PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03321_415233-425280' '(at2g43900 : 1501.0) Endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: inositol-polyphosphate 5-phosphatase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: sperm cell, male gametophyte, flower, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Endonuclease/exonuclease/phosphatase family protein (TAIR:AT1G05630.2); Has 8064 Blast hits to 7016 proteins in 490 species: Archae - 18; Bacteria - 518; Metazoa - 2458; Fungi - 805; Plants - 729; Viruses - 32; Other Eukaryotes - 3504 (source: NCBI BLink). & (gnl|cdd|35786 : 228.0) no description available & (gnl|cdd|47467 : 214.0) no description available & (reliability: 3002.0) & (original description: Putative IP5P12, Description = Type I inositol polyphosphate 5-phosphatase 12, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03424_100610-107323' '(at2g05210 : 224.0) Encodes AtPOT1a, an accessory factor for telomerase required for positive telomere length regulation. Note on nomenclature: different names have been given to Arabidopsis POT-like genes (Kuchar and Fajkus, 2004; Shakirov et al, 2005; Tani and Murata, 2005). According to a unifying nomenclature (Surovtseva et al, 2007), At2g05210 (previously named AtPOT1) is designated AtPOT1a, while At5g06310 (previously named AtPOT2) is designated AtPOT1b.; Protection of Telomeres 1a (AtPOT1a); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Telomere end binding protein (InterPro:IPR011564); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT5G06310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39954 : 134.0) no description available & (gnl|cdd|72969 : 112.0) no description available & (reliability: 448.0) & (original description: Putative PGSC0003DMG400021171, Description = Protection of telomeres 1 protein, PFAM = PF02765)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03455_553628-561795' '(at5g46280 : 973.0) MINICHROMOSOME MAINTENANCE 3 (MCM3); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 3 (InterPro:IPR008046); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT4G02060.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35700 : 938.0) no description available & (q43704|mcm3_maize : 829.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (gnl|cdd|47677 : 584.0) no description available & (reliability: 1946.0) & (original description: Putative ROA1, Description = DNA replication licensing factor MCM3 homolog 1, PFAM = PF00493;PF17207;PF14551)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03595_453452-456712' '(at1g18680 : 196.0) HNH endonuclease domain-containing protein; FUNCTIONS IN: endonuclease activity, nucleic acid binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: HNH nuclease (InterPro:IPR003615), HNH endonuclease (InterPro:IPR002711); BEST Arabidopsis thaliana protein match is: HNH endonuclease (TAIR:AT3G47490.1); Has 84 Blast hits to 84 proteins in 23 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative At1g18680, Description = HNH endonuclease domain-containing protein, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03595_1980343-1995868' '(at3g18630 : 375.0) Encodes a uracil-DNA glycosylase (UDG) involved in a base excision DNA repair pathway in mitochondria.; uracil dna glycosylase (UNG); FUNCTIONS IN: uracil DNA N-glycosylase activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Uracil-DNA glycosylase (InterPro:IPR002043), Uracil-DNA glycosylase-like (InterPro:IPR005122); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10550.1); Has 5606 Blast hits to 5606 proteins in 2219 species: Archae - 2; Bacteria - 4117; Metazoa - 124; Fungi - 141; Plants - 47; Viruses - 234; Other Eukaryotes - 941 (source: NCBI BLink). & (gnl|cdd|81482 : 328.0) no description available & (gnl|cdd|38205 : 319.0) no description available & (reliability: 750.0) & (original description: Putative ung, Description = UDG, PFAM = PF03167)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03710_1199273-1204843' '(at1g77470 : 529.0) Encodes a protein with high homology to the Replication Factor C, Subunit 3 (RFC3) of yeast and other eukaryotes. rfc3 mutants are hypersensitive to salicylic acid and exhibit enhanced induction of PR genes and resistance against virulent oomycete Hyaloperonospora arabidopsidis Noco2. The enhanced pathogen resistance in the mutant is NPR1-independent.; replication factor C subunit 3 (RFC3); FUNCTIONS IN: in 6 functions; INVOLVED IN: negative regulation of defense response; LOCATED IN: DNA replication factor C complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Replication factor C (InterPro:IPR013748), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921); BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA) (TAIR:AT1G21690.1); Has 17584 Blast hits to 17541 proteins in 2810 species: Archae - 637; Bacteria - 9895; Metazoa - 902; Fungi - 991; Plants - 392; Viruses - 88; Other Eukaryotes - 4679 (source: NCBI BLink). & (gnl|cdd|36208 : 420.0) no description available & (gnl|cdd|80670 : 310.0) no description available & (reliability: 1058.0) & (original description: Putative RFC5, Description = Replication factor C subunit 5, PFAM = PF08542;PF00004)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03785_50916-58953' '(at2g03390 : 394.0) uvrB/uvrC motif-containing protein; FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: nucleotide-excision repair; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Hemimethylated DNA-binding domain (InterPro:IPR011722), UvrB/UvrC protein (InterPro:IPR001943). & (gnl|cdd|87631 : 111.0) no description available & (reliability: 788.0) & (original description: Putative At2g03390, Description = Putative uncharacterized protein At2g03390, PFAM = PF02151;PF08755)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf03965_1535-25320' '(at3g09100 : 828.0) mRNA capping enzyme family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422), ATP dependent DNA ligase, central (InterPro:IPR012310), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme, C-terminal (InterPro:IPR013846); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT5G01290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37597 : 343.0) no description available & (gnl|cdd|85390 : 229.0) no description available & (reliability: 1656.0) & (original description: Putative RNGTT, Description = mRNA-capping enzyme, PFAM = PF03919;PF01331;PF00782)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04096_246876-268267' '(at3g48900 : 575.0) single-stranded DNA endonuclease family protein; FUNCTIONS IN: chromatin binding, DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair, chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), Chromo domain-like (InterPro:IPR016197), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Chromo domain (InterPro:IPR000953), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G01880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37730 : 210.0) no description available & (gnl|cdd|29030 : 203.0) no description available & (reliability: 1150.0) & (original description: Putative GEN2, Description = Flap endonuclease GEN-like 2, PFAM = PF00867;PF00752)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04109_497191-507412' '(at1g48650 : 161.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Double-stranded RNA-binding (InterPro:IPR001159), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G01130.1); Has 12982 Blast hits to 8882 proteins in 1499 species: Archae - 14; Bacteria - 5361; Metazoa - 2913; Fungi - 1651; Plants - 997; Viruses - 50; Other Eukaryotes - 1996 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative At1g48650, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04113_1420569-1423567' '(at1g19480 : 314.0) DNA glycosylase superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G75230.1); Has 4597 Blast hits to 4597 proteins in 1093 species: Archae - 62; Bacteria - 2351; Metazoa - 1; Fungi - 142; Plants - 80; Viruses - 0; Other Eukaryotes - 1961 (source: NCBI BLink). & (gnl|cdd|37129 : 263.0) no description available & (gnl|cdd|30471 : 177.0) no description available & (reliability: 616.0) & (original description: Putative glysoja_023078, Description = Putative DNA-3-methyladenine glycosylase yfjP, PFAM = PF00730)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04180_26969-41172' '(at2g31450 : 340.0) ATNTH1; CONTAINS InterPro DOMAIN/s: Helix-hairpin-helix motif (InterPro:IPR000445), Helix-hairpin-helix DNA-binding motif, class 1 (InterPro:IPR003583), Endonuclease III, iron-sulphur binding site (InterPro:IPR004035), DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), Endonuclease III, conserved site-2 (InterPro:IPR004036), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: endonuclease III 2 (TAIR:AT1G05900.2); Has 14133 Blast hits to 14127 proteins in 2683 species: Archae - 365; Bacteria - 9377; Metazoa - 224; Fungi - 192; Plants - 158; Viruses - 0; Other Eukaryotes - 3817 (source: NCBI BLink). & (gnl|cdd|37132 : 320.0) no description available & (gnl|cdd|30526 : 203.0) no description available & (reliability: 680.0) & (original description: Putative NTHL1, Description = Endonuclease III-like protein 1, PFAM = PF00730;PF00633)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04198_437447-470503' '(at5g04130 : 1049.0) DNA GYRASE B2; FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, ATP binding; INVOLVED IN: DNA topological change, DNA metabolic process; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA topoisomerase, type IIA, subunit B, domain 2 (InterPro:IPR013506), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA topoisomerase, type IIA, subunit B (InterPro:IPR000565), DNA topoisomerase, type IIA, subunit B/N-terminal (InterPro:IPR001241); BEST Arabidopsis thaliana protein match is: DNA GYRASE B1 (TAIR:AT3G10270.1); Has 25944 Blast hits to 25881 proteins in 6578 species: Archae - 105; Bacteria - 19082; Metazoa - 171; Fungi - 228; Plants - 112; Viruses - 77; Other Eukaryotes - 6169 (source: NCBI BLink). & (q5nbj3|gyrb_orysa : 1020.0) DNA gyrase subunit B, chloroplast/mitochondrial precursor (EC 5.99.1.3) - Oryza sativa (Rice) & (gnl|cdd|81676 : 943.0) no description available & (gnl|cdd|35576 : 594.0) no description available & (reliability: 2098.0) & (original description: Putative GYRB, Description = DNA gyrase subunit B, chloroplastic/mitochondrial, PFAM = PF02518;PF00986;PF01751;PF00204)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04198_798338-830260' '(at2g13840 : 491.0) Polymerase/histidinol phosphatase-like; FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity, catalytic activity; INVOLVED IN: DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polymerase/histidinol phosphatase-like (InterPro:IPR016195), Polymerase/histidinol phosphatase, N-terminal (InterPro:IPR003141), PHP, C-terminal (InterPro:IPR004013); Has 4358 Blast hits to 4353 proteins in 1589 species: Archae - 140; Bacteria - 3576; Metazoa - 0; Fungi - 2; Plants - 36; Viruses - 0; Other Eukaryotes - 604 (source: NCBI BLink). & (gnl|cdd|30958 : 149.0) no description available & (reliability: 982.0) & (original description: Putative BnaA03g38520D, Description = BnaA03g38520D protein, PFAM = PF02811)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04232_43501-53798' '(at2g47330 : 994.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G20920.1); Has 46798 Blast hits to 46047 proteins in 3085 species: Archae - 817; Bacteria - 24489; Metazoa - 6167; Fungi - 4661; Plants - 2616; Viruses - 11; Other Eukaryotes - 8037 (source: NCBI BLink). & (gnl|cdd|35560 : 823.0) no description available & (gnl|cdd|30859 : 388.0) no description available & (p46942|db10_nicsy : 325.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1988.0) & (original description: Putative RH24, Description = DEAD-box ATP-dependent RNA helicase 24, PFAM = PF00271;PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04313_30472-33661' '(at3g50360 : 210.0) centrin2 (CEN2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: centrin 2 (TAIR:AT4G37010.2); Has 32825 Blast hits to 20606 proteins in 1695 species: Archae - 1; Bacteria - 190; Metazoa - 13563; Fungi - 7187; Plants - 7027; Viruses - 2; Other Eukaryotes - 4855 (source: NCBI BLink). & (gnl|cdd|35251 : 162.0) no description available & (p05434|catr_chlre : 157.0) Caltractin (Centrin) (20 kDa calcium-binding protein) - Chlamydomonas reinhardtii & (gnl|cdd|34727 : 110.0) no description available & (reliability: 420.0) & (original description: Putative ce1, Description = Centrin, PFAM = PF13499;PF13499)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04375_843660-848843' '(at5g23520 : 246.0) smr (Small MutS Related) domain-containing protein; CONTAINS InterPro DOMAIN/s: Smr protein/MutS2 C-terminal (InterPro:IPR002625), Domain of unknown function DUF1771 (InterPro:IPR013899); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative PGSC0003DMG400023332, Description = Putative uncharacterized protein Sb06g017530, PFAM = PF01713;PF08590)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04383_110318-114171' '(at3g18950 : 464.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G49450.1); Has 30107 Blast hits to 16274 proteins in 601 species: Archae - 20; Bacteria - 4381; Metazoa - 11289; Fungi - 6965; Plants - 3765; Viruses - 0; Other Eukaryotes - 3687 (source: NCBI BLink). & (gnl|cdd|29257 : 127.0) no description available & (gnl|cdd|35495 : 82.8) no description available & (reliability: 928.0) & (original description: Putative wdrp, Description = WD-40 repeat family protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04418_947256-974343' '(at2g35920 : 524.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G04895.1); Has 15667 Blast hits to 10761 proteins in 1709 species: Archae - 0; Bacteria - 5024; Metazoa - 4470; Fungi - 1848; Plants - 1329; Viruses - 777; Other Eukaryotes - 2219 (source: NCBI BLink). & (gnl|cdd|36138 : 407.0) no description available & (gnl|cdd|31829 : 240.0) no description available & (reliability: 1048.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04758_42397-49488' '(at5g45400 : 742.0) RPA70C; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication factor A, C-terminal (InterPro:IPR013955), Replication factor-a protein 1 Rpa1 (InterPro:IPR004591), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Zinc finger, CCHC-type (InterPro:IPR001878), Replication factor-A protein 1, N-terminal (InterPro:IPR007199); BEST Arabidopsis thaliana protein match is: Replication factor-A protein 1-related (TAIR:AT4G19130.1); Has 1172 Blast hits to 939 proteins in 244 species: Archae - 33; Bacteria - 8; Metazoa - 314; Fungi - 240; Plants - 399; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|72071 : 218.0) no description available & (reliability: 1484.0) & (original description: Putative RPA1C, Description = Replication protein A 70 kDa DNA-binding subunit C, PFAM = PF08646;PF01336;PF04057;PF16900;PF00098;PF00098)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04764_607508-666034' '(at4g32700 : 968.0) Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development.; helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding; FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of gene expression, DNA replication, DNA recombination, photomorphogenesis; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA/RNA helicase, C-terminal (InterPro:IPR001650), DNA polymerase A domain (InterPro:IPR002298), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1); Has 17628 Blast hits to 16579 proteins in 2941 species: Archae - 600; Bacteria - 7507; Metazoa - 1254; Fungi - 1190; Plants - 590; Viruses - 412; Other Eukaryotes - 6075 (source: NCBI BLink). & (gnl|cdd|36168 : 513.0) no description available & (gnl|cdd|31092 : 290.0) no description available & (reliability: 1936.0) & (original description: Putative helq, Description = DNA polymerase theta, PFAM = PF00476;PF00270;PF00271;PF00271)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04787_375431-379160' '(at3g18950 : 461.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G49450.1); Has 30107 Blast hits to 16274 proteins in 601 species: Archae - 20; Bacteria - 4381; Metazoa - 11289; Fungi - 6965; Plants - 3765; Viruses - 0; Other Eukaryotes - 3687 (source: NCBI BLink). & (gnl|cdd|29257 : 118.0) no description available & (gnl|cdd|35495 : 81.3) no description available & (reliability: 922.0) & (original description: Putative wdrp, Description = WD-40 repeat family protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04889_56755-61115' '(at5g56780 : 249.0) effector of transcription2 (ET2); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26170.1); Has 86 Blast hits to 52 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative ET3, Description = AtET3, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04905_15058-24235' '(at1g27850 : 476.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40070.1); Has 9215 Blast hits to 5316 proteins in 473 species: Archae - 6; Bacteria - 773; Metazoa - 3392; Fungi - 1710; Plants - 539; Viruses - 143; Other Eukaryotes - 2652 (source: NCBI BLink). & (reliability: 952.0) & (original description: Putative PGSC0003DMG400017461, Description = , PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04944_56085-83070' '(at5g11350 : 335.0) DNAse I-like superfamily protein; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G73875.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37549 : 172.0) no description available & (gnl|cdd|34836 : 92.3) no description available & (reliability: 670.0) & (original description: Putative DXPS3, Description = CCR4 homolog 3, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf04994_36264-49108' '(at1g47510 : 382.0) Encodes a phosphatidylinositol polyphosphate 5-phosphatase. It can dephosphorylate PI(4,5)P2, PI(3,5)P2, and PI(3,4,5)P3, but, it is not active against PI(5)P or the water soluble inositol(1,4,5)P3 or inositol(1,3,4,5)P4. The transcript levels for this gene rise in response to auxin, ABA, and JA.; inositol polyphosphate 5-phosphatase 11 (5PTASE11); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Endonuclease/exonuclease/phosphatase family protein (TAIR:AT1G65580.1). & (gnl|cdd|35786 : 187.0) no description available & (gnl|cdd|34970 : 161.0) no description available & (reliability: 764.0) & (original description: Putative IP5P11, Description = Type IV inositol polyphosphate 5-phosphatase 11, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05025_998359-1013956' '(at5g35910 : 759.0) Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain (TAIR:AT1G54440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37417 : 438.0) no description available & (gnl|cdd|85567 : 161.0) no description available & (reliability: 1518.0) & (original description: Putative RRP6L2, Description = Protein RRP6-like 2, PFAM = PF01612;PF00570;PF08066)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05040_22046-40861' '(at1g05630 : 616.0) Encodes an inositol polyphosphate 5-phosphatase with phosphatase activity toward only Ins(1,4,5)P3. Induced in response to ABA and wounding treatments. Expressed in young seedlings and flowers, while no transcripts were detectable in maturated roots, stems, and rosette leaves Modulates the development of cotyledon veins through its regulation of auxin homeostasis. Involved in blue light lightñstimulated increase in cytosolic calcium ion.; 5PTASE13; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: endonuclease/exonuclease/phosphatase family protein (TAIR:AT2G31830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1230.0) & (original description: Putative D50, Description = Type I inositol-1,4,5-trisphosphate 5-phosphatase, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05056_245894-253286' '(at1g63160 : 612.0) replication factor C 2 (RFC2); FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA replication; LOCATED IN: DNA replication factor C complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Replication factor C (InterPro:IPR013748), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921); BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA) (TAIR:AT1G21690.1); Has 17520 Blast hits to 17472 proteins in 2840 species: Archae - 620; Bacteria - 9832; Metazoa - 859; Fungi - 958; Plants - 372; Viruses - 89; Other Eukaryotes - 4790 (source: NCBI BLink). & (gnl|cdd|36209 : 562.0) no description available & (gnl|cdd|80670 : 341.0) no description available & (reliability: 1224.0) & (original description: Putative RFC2, Description = Replication factor C subunit 2, PFAM = PF00004;PF08542)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05056_395117-404649' '(at2g31450 : 368.0) ATNTH1; CONTAINS InterPro DOMAIN/s: Helix-hairpin-helix motif (InterPro:IPR000445), Helix-hairpin-helix DNA-binding motif, class 1 (InterPro:IPR003583), Endonuclease III, iron-sulphur binding site (InterPro:IPR004035), DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), Endonuclease III, conserved site-2 (InterPro:IPR004036), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: endonuclease III 2 (TAIR:AT1G05900.2); Has 14133 Blast hits to 14127 proteins in 2683 species: Archae - 365; Bacteria - 9377; Metazoa - 224; Fungi - 192; Plants - 158; Viruses - 0; Other Eukaryotes - 3817 (source: NCBI BLink). & (gnl|cdd|37132 : 346.0) no description available & (gnl|cdd|30526 : 207.0) no description available & (reliability: 736.0) & (original description: Putative NTH1, Description = Endonuclease III homolog 1, chloroplastic, PFAM = PF00730;PF00633)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05081_47571-57863' '(at2g37025 : 118.0) TRF-like 8 (TRFL8); FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 6 (TAIR:AT1G72650.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative MYB28, Description = Telomere repeat-binding factor like-protein, PFAM = PF00249)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05107_56174-60191' '(at3g02065 : 676.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, HIT-type (InterPro:IPR007529), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G42520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35552 : 312.0) no description available & (gnl|cdd|30859 : 287.0) no description available & (p46942|db10_nicsy : 231.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1352.0) & (original description: Putative RH41, Description = DEAD-box ATP-dependent RNA helicase 41, PFAM = PF04438;PF00270;PF00271)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05123_57956-70259' '(at5g04560 : 541.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 101.0) no description available & (reliability: 1008.0) & (original description: Putative pg3, Description = Protein ROS1, PFAM = PF15628)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05183_160088-165552' '(at5g49010 : 238.0) Similar to the SLD5 component of GINS complex, which in other organism was shown to be involved in the initiation of DNA replication.; SYNTHETIC LETHALITY WITH DPB11-1 5 (SLD5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: DNA-dependent DNA replication initiation; LOCATED IN: GINS complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GINS complex, subunit Sld5 (InterPro:IPR008591), GINS complex (InterPro:IPR021151); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69439 : 141.0) no description available & (gnl|cdd|38386 : 135.0) no description available & (reliability: 476.0) & (original description: Putative SLD5, Description = DNA replication complex GINS protein SLD5, PFAM = PF05916;PF16922)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05206_3703-10506' '(at3g12530 : 229.0) PSF2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GINS complex (InterPro:IPR021151), GINS complex, subunit Psf2 (InterPro:IPR007257), GINS complex, subunit Psf2, subgroup (InterPro:IPR016906); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86554 : 206.0) no description available & (gnl|cdd|39274 : 197.0) no description available & (reliability: 458.0) & (original description: Putative GINS2, Description = DNA replication complex GINS protein PSF2, PFAM = PF05916)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05301_580030-585120' '(at2g48030 : 464.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT3G21530.1); Has 404 Blast hits to 404 proteins in 167 species: Archae - 0; Bacteria - 325; Metazoa - 1; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 928.0) & (original description: Putative At2g48030, Description = At2g48030, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05311_9576-15395' '(at5g32440 : 209.0) Ubiquitin system component Cue protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1). & (reliability: 418.0) & (original description: Putative Os06g0642900, Description = Os06g0642900 protein, PFAM = PF02845)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05367_122569-138996' '(at3g54350 : 251.0) embryo defective 1967 (emb1967); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: Forkhead-associated (FHA) domain-containing protein (TAIR:AT1G75530.1); Has 387 Blast hits to 260 proteins in 92 species: Archae - 0; Bacteria - 0; Metazoa - 229; Fungi - 23; Plants - 94; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|37504 : 177.0) no description available & (reliability: 502.0) & (original description: Putative At1g75530, Description = Forkhead-associated (FHA) domain-containing protein, PFAM = PF00498;PF13325)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05422_141133-148282' '(at1g34380 : 403.0) 5'-3' exonuclease family protein; FUNCTIONS IN: 5'-3' exonuclease activity, DNA binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 5'-3' exonuclease, SAM-fold domain (InterPro:IPR020047), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), 5'-3' exonuclease, N-terminal resolvase-like domain (InterPro:IPR020046); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT3G52050.5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|28892 : 160.0) no description available & (reliability: 806.0) & (original description: Putative BnaC06g08260D, Description = BnaC06g08260D protein, PFAM = PF01367;PF02739)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05483_611482-622959' '(at3g22790 : 785.0) Kinase interacting (KIP1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: kinase interacting (KIP1-like) family protein (TAIR:AT4G14760.1); Has 216725 Blast hits to 82224 proteins in 3436 species: Archae - 3482; Bacteria - 43267; Metazoa - 93913; Fungi - 17447; Plants - 11833; Viruses - 1017; Other Eukaryotes - 45766 (source: NCBI BLink). & (gnl|cdd|35383 : 119.0) no description available & (gnl|cdd|71206 : 119.0) no description available & (reliability: 1466.0) & (original description: Putative KIP1, Description = BnaA03g14020D protein, PFAM = PF07765)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05535_13358-17616' '(at5g04050 : 688.0) RNA-directed DNA polymerase (reverse transcriptase); FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity; INVOLVED IN: RNA-dependent DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477); BEST Arabidopsis thaliana protein match is: Intron maturase, type II family protein (TAIR:AT1G74350.1); Has 3089 Blast hits to 3057 proteins in 1086 species: Archae - 3; Bacteria - 2166; Metazoa - 8; Fungi - 43; Plants - 770; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (gnl|cdd|73157 : 122.0) no description available & (gnl|cdd|39965 : 85.1) no description available & (reliability: 1376.0) & (original description: Putative At5g04050, Description = RNA-directed DNA polymerase (Reverse transcriptase), PFAM = PF00078;PF01348)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05671_28703-85987' '(at4g32700 : 1516.0) Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development.; helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding; FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of gene expression, DNA replication, DNA recombination, photomorphogenesis; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA/RNA helicase, C-terminal (InterPro:IPR001650), DNA polymerase A domain (InterPro:IPR002298), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1); Has 17628 Blast hits to 16579 proteins in 2941 species: Archae - 600; Bacteria - 7507; Metazoa - 1254; Fungi - 1190; Plants - 590; Viruses - 412; Other Eukaryotes - 6075 (source: NCBI BLink). & (gnl|cdd|36168 : 578.0) no description available & (gnl|cdd|31397 : 294.0) no description available & (reliability: 3032.0) & (original description: Putative polq, Description = DNA polymerase theta, PFAM = PF00476;PF00270;PF00271)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05674_655096-658535' '(at3g50390 : 492.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G26490.1); Has 33178 Blast hits to 17374 proteins in 678 species: Archae - 38; Bacteria - 5184; Metazoa - 12049; Fungi - 7688; Plants - 3936; Viruses - 0; Other Eukaryotes - 4283 (source: NCBI BLink). & (gnl|cdd|29257 : 143.0) no description available & (gnl|cdd|35487 : 96.4) no description available & (reliability: 940.0) & (original description: Putative wdrp, Description = WD-40 repeat family protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05805_240707-246515' '(at4g36050 : 126.0) endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: zinc ion binding, nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), Exodeoxyribonuclease III xth (InterPro:IPR004808), Zinc finger, GRF-type (InterPro:IPR010666); BEST Arabidopsis thaliana protein match is: apurinic endonuclease-redox protein (TAIR:AT2G41460.1); Has 8559 Blast hits to 7505 proteins in 2283 species: Archae - 114; Bacteria - 4844; Metazoa - 586; Fungi - 501; Plants - 129; Viruses - 2; Other Eukaryotes - 2383 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative apex2, Description = DNA-(apurinic or apyrimidinic site) lyase, PFAM = PF06839)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf05932_597753-606989' '(at5g26680 : 616.0) 5'-3' exonuclease family protein; FUNCTIONS IN: 5'-3' exonuclease activity, DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: XPG conserved site (InterPro:IPR019974), XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, N-terminal (InterPro:IPR002421), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G29630.2); Has 3563 Blast hits to 3243 proteins in 839 species: Archae - 284; Bacteria - 855; Metazoa - 643; Fungi - 727; Plants - 266; Viruses - 42; Other Eukaryotes - 746 (source: NCBI BLink). & (q9sxq6|fen1a_orysa : 595.0) Flap endonuclease 1a (EC 3.1.-.-) (OsFEN-1a) - Oryza sativa (Rice) & (gnl|cdd|37730 : 441.0) no description available & (gnl|cdd|29030 : 396.0) no description available & (reliability: 1232.0) & (original description: Putative FEN1b, Description = Flap endonuclease 1-B, PFAM = PF00867;PF00752)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf06008_1-4775' '(at5g08020 : 847.0) Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair.; RPA70-kDa subunit B (RPA70B); FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: DNA repair, response to UV-B, DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Replication factor-a protein 1 Rpa1 (InterPro:IPR004591), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication factor A, C-terminal (InterPro:IPR013955), Replication factor-A protein 1, N-terminal (InterPro:IPR007199); BEST Arabidopsis thaliana protein match is: Replication factor-A protein 1-related (TAIR:AT5G61000.1); Has 1056 Blast hits to 1045 proteins in 226 species: Archae - 10; Bacteria - 0; Metazoa - 213; Fungi - 147; Plants - 535; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|72071 : 172.0) no description available & (reliability: 1694.0) & (original description: Putative RPA1B, Description = Replication protein A 70 kDa DNA-binding subunit B, PFAM = PF04057;PF16900;PF08646;PF01336)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf06091_642418-648635' '(at5g32440 : 202.0) Ubiquitin system component Cue protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1). & (reliability: 404.0) & (original description: Putative Os06g0642900, Description = Os06g0642900 protein, PFAM = PF02845)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf06189_407432-410172' '(at5g04110 : 130.0) DNA GYRASE B3 (GYRB3); FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, ATP binding; INVOLVED IN: DNA topological change, DNA metabolic process; LOCATED IN: chromosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA topoisomerase, type IIA, subunit B, domain 2 (InterPro:IPR013506), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), DNA topoisomerase, type IIA, subunit B (InterPro:IPR000565), DNA topoisomerase, type IIA, subunit B/N-terminal (InterPro:IPR001241); BEST Arabidopsis thaliana protein match is: DNA GYRASE B2 (TAIR:AT5G04130.1); Has 21414 Blast hits to 21375 proteins in 6002 species: Archae - 105; Bacteria - 17678; Metazoa - 58; Fungi - 26; Plants - 200; Viruses - 8; Other Eukaryotes - 3339 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative , Description = DNA binding protein, putative, PFAM = PF01448)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf06280_4716-7819' '(at2g47450 : 352.0) A component of the chloroplast signal recognition particle pathway that is involved in LHCP targeting. It is downregulated in response to high light. It recognizes the DPLG motif in Lhcb1.; CHAOS (CAO); FUNCTIONS IN: chromatin binding; INVOLVED IN: response to high light intensity, protein import into chloroplast thylakoid membrane; LOCATED IN: chloroplast thylakoid membrane, chloroplast, signal recognition particle, chloroplast targeting, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Chromo domain-like (InterPro:IPR016197), Chromo domain (InterPro:IPR000953), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing protein 2 (TAIR:AT4G35450.5); Has 25373 Blast hits to 13489 proteins in 848 species: Archae - 87; Bacteria - 2575; Metazoa - 11620; Fungi - 2006; Plants - 1049; Viruses - 137; Other Eukaryotes - 7899 (source: NCBI BLink). & (q8lsq2|sr43c_orysa : 295.0) Probable signal recognition particle 43 kDa protein, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|29261 : 90.1) no description available & (reliability: 704.0) & (original description: Putative CAO, Description = Signal recognition particle 43 kDa protein, chloroplastic, PFAM = PF00385;PF13857)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf06295_520713-523441' '(at3g45590 : 272.0) Encodes a catalytic subunit of tRNA splicing endonuclease.; splicing endonuclease 1 (SEN1); FUNCTIONS IN: tRNA-intron endonuclease activity, nuclease activity, nucleic acid binding; INVOLVED IN: tRNA splicing, via endonucleolytic cleavage and ligation; LOCATED IN: tRNA-intron endonuclease complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-intron endonuclease (InterPro:IPR006676), tRNA intron endonuclease, catalytic domain-like (InterPro:IPR006677), Endonuclease TnsA, N-terminal/resolvase Hjc/tRNA endonuclease, C-terminal (InterPro:IPR011856), tRNA intron endonuclease, N-terminal (InterPro:IPR006678); BEST Arabidopsis thaliana protein match is: splicing endonuclease 2 (TAIR:AT5G60230.2); Has 489 Blast hits to 489 proteins in 224 species: Archae - 131; Bacteria - 0; Metazoa - 123; Fungi - 137; Plants - 68; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (q5z6b1|sen2_orysa : 216.0) Probable tRNA-splicing endonuclease subunit Sen2 (EC 3.1.27.9) (tRNA-intron endonuclease Sen2) - Oryza sativa (Rice) & (gnl|cdd|39883 : 200.0) no description available & (gnl|cdd|82925 : 85.3) no description available & (reliability: 544.0) & (original description: Putative SEN1, Description = tRNA-splicing endonuclease subunit Sen2-1, PFAM = PF01974;PF02778)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf06375_157245-166328' '(at4g30100 : 1607.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G19120.1); Has 5876 Blast hits to 5615 proteins in 1104 species: Archae - 176; Bacteria - 1754; Metazoa - 1255; Fungi - 973; Plants - 640; Viruses - 179; Other Eukaryotes - 899 (source: NCBI BLink). & (gnl|cdd|37012 : 499.0) no description available & (gnl|cdd|31309 : 199.0) no description available & (reliability: 3214.0) & (original description: Putative At2g19120, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF13086;PF13087)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf06424_236653-245185' '(at2g31270 : 115.0) Encodes a cyclin-dependent protein kinase. Involved in nuclear DNA replication and plastid division. Located in nucleus and chloroplast.; homolog of yeast CDT1 A (CDT1A); FUNCTIONS IN: protein binding, cyclin-dependent protein kinase activity; INVOLVED IN: chloroplast organization, DNA replication; LOCATED IN: chloroplast, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA replication factor CDT1-like (InterPro:IPR014939); BEST Arabidopsis thaliana protein match is: homolog of yeast CDT1 B homolog of yeast CDT1 B (TAIR:AT3G54710.1); Has 1317 Blast hits to 1078 proteins in 213 species: Archae - 6; Bacteria - 83; Metazoa - 600; Fungi - 201; Plants - 122; Viruses - 41; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|87677 : 115.0) no description available & (gnl|cdd|39959 : 93.9) no description available & (reliability: 230.0) & (original description: Putative , Description = , PFAM = PF08839)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf06525_52987-70717' '(at2g32000 : 1373.0) DNA topoisomerase, type IA, core; FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase type I activity, DNA binding, nucleic acid binding; INVOLVED IN: DNA topological change, DNA unwinding involved in replication, DNA metabolic process; LOCATED IN: endomembrane system, chromosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Toprim domain, subgroup (InterPro:IPR006154), DNA topoisomerase, type IA, central region, subdomain 1 (InterPro:IPR013824), DNA topoisomerase, type IA, core (InterPro:IPR000380), Toprim domain (InterPro:IPR006171), DNA topoisomerase, type IA, DNA-binding (InterPro:IPR003602), DNA topoisomerase, type IA, domain 2 (InterPro:IPR003601), DNA topoisomerase, type IA, central (InterPro:IPR013497), DNA topoisomerase, type IA, central region, subdomain 3 (InterPro:IPR013826); BEST Arabidopsis thaliana protein match is: topoisomerase 3alpha (TAIR:AT5G63920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37168 : 642.0) no description available & (gnl|cdd|30896 : 405.0) no description available & (reliability: 2746.0) & (original description: Putative top3b, Description = DNA topoisomerase, PFAM = PF01751;PF01131)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf06603_146652-160645' '(at3g16710 : 176.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT5G41170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 167.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 336.0) & (original description: Putative , Description = , PFAM = PF12854;PF01535;PF01535;PF13041;PF13041)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf06737_29658-37639' '(at4g24790 : 570.0) AAA-type ATPase family protein; FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication; LOCATED IN: DNA polymerase III complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), DNA polymerase III, subunit gamma/ tau (InterPro:IPR012763); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G14460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36207 : 309.0) no description available & (gnl|cdd|32641 : 265.0) no description available & (reliability: 1140.0) & (original description: Putative At4g24790, Description = Protein STICHEL-like 2, PFAM = PF13177)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf06825_18753-26624' '(at2g31270 : 115.0) Encodes a cyclin-dependent protein kinase. Involved in nuclear DNA replication and plastid division. Located in nucleus and chloroplast.; homolog of yeast CDT1 A (CDT1A); FUNCTIONS IN: protein binding, cyclin-dependent protein kinase activity; INVOLVED IN: chloroplast organization, DNA replication; LOCATED IN: chloroplast, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA replication factor CDT1-like (InterPro:IPR014939); BEST Arabidopsis thaliana protein match is: homolog of yeast CDT1 B homolog of yeast CDT1 B (TAIR:AT3G54710.1); Has 1317 Blast hits to 1078 proteins in 213 species: Archae - 6; Bacteria - 83; Metazoa - 600; Fungi - 201; Plants - 122; Viruses - 41; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|87677 : 113.0) no description available & (gnl|cdd|39959 : 101.0) no description available & (reliability: 230.0) & (original description: Putative , Description = , PFAM = PF08839)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf06862_126070-134730' '(at2g02480 : 1061.0) STICHEL mutant shows trichomes with fewer than normal branches.; STICHEL (STI); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity, ATP binding; INVOLVED IN: trichome differentiation, trichome branching; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), DNA polymerase III, subunit gamma/ tau (InterPro:IPR012763); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G14460.1); Has 15360 Blast hits to 15082 proteins in 2818 species: Archae - 391; Bacteria - 8894; Metazoa - 533; Fungi - 525; Plants - 301; Viruses - 38; Other Eukaryotes - 4678 (source: NCBI BLink). & (gnl|cdd|36207 : 333.0) no description available & (gnl|cdd|32641 : 287.0) no description available & (reliability: 2122.0) & (original description: Putative STI, Description = Protein STICHEL, PFAM = PF13177;PF12169)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07002_50703-53772' '(at1g66730 : 207.0) Encodes a novel plant specific DNA ligase that is involved in seed germination and DNA repair.; DNA LIGASE 6 (LIG6); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, seed germination, DNA recombination, DNA replication; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), DNA repair metallo-beta-lactamase (InterPro:IPR011084), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 4468 Blast hits to 4373 proteins in 907 species: Archae - 366; Bacteria - 1648; Metazoa - 644; Fungi - 681; Plants - 268; Viruses - 157; Other Eukaryotes - 704 (source: NCBI BLink). & (gnl|cdd|36185 : 183.0) no description available & (gnl|cdd|80824 : 122.0) no description available & (reliability: 414.0) & (original description: Putative adl1, Description = DNA ligase, PFAM = PF01068)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07002_52792-89309' '(at1g66730 : 1217.0) Encodes a novel plant specific DNA ligase that is involved in seed germination and DNA repair.; DNA LIGASE 6 (LIG6); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, seed germination, DNA recombination, DNA replication; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), DNA repair metallo-beta-lactamase (InterPro:IPR011084), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 4468 Blast hits to 4373 proteins in 907 species: Archae - 366; Bacteria - 1648; Metazoa - 644; Fungi - 681; Plants - 268; Viruses - 157; Other Eukaryotes - 704 (source: NCBI BLink). & (gnl|cdd|36185 : 513.0) no description available & (gnl|cdd|80824 : 224.0) no description available & (reliability: 2434.0) & (original description: Putative cdc17, Description = DNA ligase, PFAM = PF01068;PF07522;PF04675)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07034_603004-614315' '(at3g54350 : 189.0) embryo defective 1967 (emb1967); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: Forkhead-associated (FHA) domain-containing protein (TAIR:AT1G75530.1); Has 387 Blast hits to 260 proteins in 92 species: Archae - 0; Bacteria - 0; Metazoa - 229; Fungi - 23; Plants - 94; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|37504 : 187.0) no description available & (reliability: 378.0) & (original description: Putative At1g75530, Description = Forkhead-associated (FHA) domain-containing protein, PFAM = PF00498;PF13325)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07058_251214-255848' '(at1g26840 : 360.0) Origin Recognition Complex subunit 6. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors.; origin recognition complex protein 6 (ORC6); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA replication; LOCATED IN: origin recognition complex; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 6, metazoa/plant (InterPro:IPR020529), Origin recognition complex, subunit 6 (InterPro:IPR008721); Has 179 Blast hits to 179 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 105; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|39757 : 238.0) no description available & (gnl|cdd|69009 : 212.0) no description available & (reliability: 720.0) & (original description: Putative ORC6, Description = Origin of replication complex subunit 6, PFAM = PF05460)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07113_56279-70523' '(at3g01810 : 442.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2). & (reliability: 812.0) & (original description: Putative BnaC04g02610D, Description = BnaC04g02610D protein, PFAM = PF10358)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07147_409878-416982' '(at3g13170 : 460.0) Encodes AtSPO11-1, one of the three Arabidopsis homologues of the archaeal DNA topoisomerase VIA subunit (topo VIA). Required for meiotic recombination. AtSPO11-1 and AtSPO11-2 have overlapping functions (i.e. both required for meiotic recombination) whereas AtSPO11-3 functions in DNA replication. AtSPO11-1 accumulates in foci in early G2. At 1 h post-S phase, no foci are observed, but by 3 h a majority (80%) of meiocytes at this time point contain >50 foci. However, by 5 h, AtSPO11-1 foci are no longer detectable. This suggests that the protein undergoes a rapid cycle of accumulation and disappearance in meiocytes over a period of between 1 and 5 h post-S phase.; ATSPO11-1; CONTAINS InterPro DOMAIN/s: Spo11/DNA topoisomerase VI, subunit A, N-terminal (InterPro:IPR013049), Meiotic recombination, Spo11 (InterPro:IPR013048), Spo11/DNA topoisomerase VI, subunit A (InterPro:IPR002815); BEST Arabidopsis thaliana protein match is: Spo11/DNA topoisomerase VI, subunit A protein (TAIR:AT5G02820.1); Has 908 Blast hits to 908 proteins in 313 species: Archae - 216; Bacteria - 16; Metazoa - 170; Fungi - 122; Plants - 151; Viruses - 0; Other Eukaryotes - 233 (source: NCBI BLink). & (gnl|cdd|38006 : 370.0) no description available & (gnl|cdd|31883 : 228.0) no description available & (reliability: 920.0) & (original description: Putative TOP6A, Description = Meiotic recombination protein SPO11-1, PFAM = PF04406)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07182_73453-80179' '(at2g31270 : 275.0) Encodes a cyclin-dependent protein kinase. Involved in nuclear DNA replication and plastid division. Located in nucleus and chloroplast.; homolog of yeast CDT1 A (CDT1A); FUNCTIONS IN: protein binding, cyclin-dependent protein kinase activity; INVOLVED IN: chloroplast organization, DNA replication; LOCATED IN: chloroplast, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA replication factor CDT1-like (InterPro:IPR014939); BEST Arabidopsis thaliana protein match is: homolog of yeast CDT1 B homolog of yeast CDT1 B (TAIR:AT3G54710.1); Has 1317 Blast hits to 1078 proteins in 213 species: Archae - 6; Bacteria - 83; Metazoa - 600; Fungi - 201; Plants - 122; Viruses - 41; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|39959 : 174.0) no description available & (gnl|cdd|87677 : 134.0) no description available & (reliability: 550.0) & (original description: Putative , Description = , PFAM = PF08839;PF16679)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07183_17445-33163' '(at5g11170 : 787.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cadmium ion; LOCATED IN: nucleolus; EXPRESSED IN: guard cell, root, cultured cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein (TAIR:AT5G11200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35550 : 611.0) no description available & (gnl|cdd|30859 : 357.0) no description available & (p35683|if4a_orysa : 244.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (reliability: 1574.0) & (original description: Putative RH15, Description = DEAD-box ATP-dependent RNA helicase 15, PFAM = PF00270;PF00271)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07191_232290-237051' '(at5g23120 : 219.0) encodes a stability and/or assembly factor of photosystem II; HIGH CHLOROPHYLL FLUORESCENCE 136 (HCF136); INVOLVED IN: response to cadmium ion, plastid organization, protein complex assembly; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BNR repeat (InterPro:IPR002860), Photosystem II stability/assembly factor, HCF136 (InterPro:IPR016705), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5z5a8|p2saf_orysa : 216.0) Photosystem II stability/assembly factor HCF136, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|34127 : 96.3) no description available & (gnl|cdd|38720 : 80.4) no description available & (reliability: 402.0) & (original description: Putative ycf48, Description = Ycf48-like protein, PFAM = PF14870)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07227_67261-72369' '(at3g55060 : 500.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39300.2); Has 61765 Blast hits to 33720 proteins in 2065 species: Archae - 846; Bacteria - 6964; Metazoa - 31967; Fungi - 5247; Plants - 3104; Viruses - 205; Other Eukaryotes - 13432 (source: NCBI BLink). & (reliability: 1000.0) & (original description: Putative BnaC06g15600D, Description = BnaC06g15600D protein, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07231_1-4757' '(at1g18680 : 232.0) HNH endonuclease domain-containing protein; FUNCTIONS IN: endonuclease activity, nucleic acid binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: HNH nuclease (InterPro:IPR003615), HNH endonuclease (InterPro:IPR002711); BEST Arabidopsis thaliana protein match is: HNH endonuclease (TAIR:AT3G47490.1); Has 84 Blast hits to 84 proteins in 23 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 464.0) & (original description: Putative F6A14.21, Description = F6A14.21 protein, PFAM = PF01844)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07253_373015-381844' '(at1g65780 : 544.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G65810.1); Has 5699 Blast hits to 4991 proteins in 919 species: Archae - 198; Bacteria - 1488; Metazoa - 1292; Fungi - 1154; Plants - 656; Viruses - 49; Other Eukaryotes - 862 (source: NCBI BLink). & (gnl|cdd|37012 : 311.0) no description available & (gnl|cdd|31309 : 140.0) no description available & (reliability: 1088.0) & (original description: Putative At1g65810, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF13086;PF13087)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07287_152925-156006' '(at1g19480 : 325.0) DNA glycosylase superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G75230.1); Has 4597 Blast hits to 4597 proteins in 1093 species: Archae - 62; Bacteria - 2351; Metazoa - 1; Fungi - 142; Plants - 80; Viruses - 0; Other Eukaryotes - 1961 (source: NCBI BLink). & (gnl|cdd|37129 : 259.0) no description available & (gnl|cdd|30471 : 159.0) no description available & (reliability: 614.0) & (original description: Putative BnaA06g13680D, Description = BnaA06g13680D protein, PFAM = PF00730)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07388_90784-93626' '(gnl|cdd|36777 : 243.0) no description available & (at5g57450 : 217.0) Involved in homologous recombination and recombinational repair, mutants are sterile, hypersensitive to DNA crosslinking agents, show aberrant meiosis with extensive chromosome fragmentation; homolog of X-ray repair cross complementing 3 (XRCC3) (XRCC3); CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), DNA recombination and repair protein, RecA-like (InterPro:IPR016467), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis thaliana protein match is: RAS associated with diabetes protein 51C (TAIR:AT2G45280.1); Has 2317 Blast hits to 2308 proteins in 507 species: Archae - 430; Bacteria - 4; Metazoa - 689; Fungi - 429; Plants - 393; Viruses - 0; Other Eukaryotes - 372 (source: NCBI BLink). & (gnl|cdd|29989 : 213.0) no description available & (reliability: 434.0) & (original description: Putative XRCC3, Description = DNA repair protein XRCC3 homolog, PFAM = PF08423)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07638_480935-488680' '(at5g11170 : 783.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cadmium ion; LOCATED IN: nucleolus; EXPRESSED IN: guard cell, root, cultured cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein (TAIR:AT5G11200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35550 : 610.0) no description available & (gnl|cdd|30859 : 358.0) no description available & (p35683|if4a_orysa : 244.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (reliability: 1566.0) & (original description: Putative RH15, Description = DEAD-box ATP-dependent RNA helicase 15, PFAM = PF00271;PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07792_67673-84277' '(at1g65780 : 716.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G65810.1); Has 5699 Blast hits to 4991 proteins in 919 species: Archae - 198; Bacteria - 1488; Metazoa - 1292; Fungi - 1154; Plants - 656; Viruses - 49; Other Eukaryotes - 862 (source: NCBI BLink). & (gnl|cdd|37012 : 449.0) no description available & (gnl|cdd|31309 : 157.0) no description available & (reliability: 1432.0) & (original description: Putative At4g05540, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF13086;PF13087;PF02891)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf07981_198852-211017' '(at3g53110 : 577.0) Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4); FUNCTIONS IN: RNA helicase activity, RNA-dependent ATPase activity, ATP-dependent helicase activity; INVOLVED IN: poly(A)+ mRNA export from nucleus, response to cold, response to heat, response to abscisic acid stimulus; LOCATED IN: nuclear envelope, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1); Has 40925 Blast hits to 40635 proteins in 3033 species: Archae - 702; Bacteria - 21081; Metazoa - 5720; Fungi - 4311; Plants - 2419; Viruses - 28; Other Eukaryotes - 6664 (source: NCBI BLink). & (gnl|cdd|35553 : 464.0) no description available & (gnl|cdd|30859 : 266.0) no description available & (p41380|if4a3_nicpl : 210.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1154.0) & (original description: Putative DBP5, Description = ATP-dependent RNA helicase DBP5, PFAM = PF00270;PF00271)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08111_265663-268384' '(at1g14900 : 83.6) Encodes a protein belonging to the subgroup of HMGA (high mobility group A) proteins that interact with A/T-rich stretches of DNA.; high mobility group A (HMGA); FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent, nucleosome assembly; LOCATED IN: cytosol, nuclear chromatin, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), A.T hook-like (InterPro:IPR020478), AT hook, DNA-binding motif (InterPro:IPR017956), High mobility group, HMG-I/HMG-Y (InterPro:IPR000116), Histone H1/H5 (InterPro:IPR005818); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT3G18035.1); Has 1377 Blast hits to 1228 proteins in 223 species: Archae - 0; Bacteria - 119; Metazoa - 428; Fungi - 179; Plants - 544; Viruses - 9; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative HMGA, Description = HMG-Y-related protein A, PFAM = PF02178;PF02178;PF02178;PF00538)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08128_36388-46241' '(at1g08840 : 252.0) embryo defective 2411 (emb2411); FUNCTIONS IN: ATP-dependent DNA helicase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD/REP type (InterPro:IPR000212), DNA replication factor Dna2 (InterPro:IPR014808); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1). & (gnl|cdd|37016 : 217.0) no description available & (gnl|cdd|31309 : 111.0) no description available & (reliability: 504.0) & (original description: Putative DNA2, Description = DNA2, PFAM = PF13087;PF13086)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08128_36428-38930' '(at1g08840 : 118.0) embryo defective 2411 (emb2411); FUNCTIONS IN: ATP-dependent DNA helicase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD/REP type (InterPro:IPR000212), DNA replication factor Dna2 (InterPro:IPR014808); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1). & (gnl|cdd|37016 : 83.5) no description available & (reliability: 236.0) & (original description: Putative emb2411, Description = DNA2-like helicase, PFAM = PF13086)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08128_37215-46018' '(at1g08840 : 122.0) embryo defective 2411 (emb2411); FUNCTIONS IN: ATP-dependent DNA helicase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD/REP type (InterPro:IPR000212), DNA replication factor Dna2 (InterPro:IPR014808); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1). & (gnl|cdd|37016 : 112.0) no description available & (reliability: 244.0) & (original description: Putative dna2, Description = DNA replication ATP-dependent helicase Dna2, PFAM = PF13086)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08134_80892-91306' '(at5g55310 : 780.0) Encodes one of two Arabidopsis type-I DNA topoisomerase I genes. Reducing the level of expression of this gene in a top1alpha (At5g55300) mutant background causes seedling lethality.; DNA topoisomerase 1 beta (TOP1BETA); FUNCTIONS IN: DNA topoisomerase type I activity; INVOLVED IN: DNA topological change; LOCATED IN: membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA topoisomerase I, DNA binding, mixed alpha/beta motif, eukaryotic-type (InterPro:IPR013030), DNA topoisomerase I, DNA binding, eukaryotic-type (InterPro:IPR008336), DNA topoisomerase I, C-terminal (InterPro:IPR001631), DNA topoisomerase I, active site (InterPro:IPR018521), DNA topoisomerase I, catalytic core, alpha/beta subdomain, eukaryotic-type (InterPro:IPR014727), DNA topoisomerase I, catalytic core, eukaryotic-type (InterPro:IPR013500), DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type (InterPro:IPR014711), DNA topoisomerase I, C-terminal, eukaryotic-type (InterPro:IPR013499), DNA breaking-rejoining enzyme, catalytic core (InterPro:IPR011010); BEST Arabidopsis thaliana protein match is: DNA topoisomerase I alpha (TAIR:AT5G55300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36199 : 776.0) no description available & (p93119|top1_dauca : 704.0) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I) - Daucus carota (Carrot) & (gnl|cdd|47742 : 504.0) no description available & (reliability: 1560.0) & (original description: Putative TOP1, Description = DNA topoisomerase 1, PFAM = PF14370;PF02919;PF01028)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08137_310334-317057' '(at5g22110 : 684.0) Encodes a protein with similarity to DNA polymerase epsilon subunit B an essential gene that is required for DNA replication. Homozygous mutants are embryo lethal. Expressed in meristematic , rapidly dividing regions.; DNA polymerase epsilon subunit B2 (DPB2); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding; INVOLVED IN: DNA replication, DNA-dependent DNA replication; LOCATED IN: epsilon DNA polymerase complex, nucleus; EXPRESSED IN: embryo, male gametophyte, apical meristem, female gametophyte; CONTAINS InterPro DOMAIN/s: DNA polymerase epsilon, subunit B (InterPro:IPR016266), DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 412 Blast hits to 394 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 144; Plants - 62; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|39022 : 345.0) no description available & (gnl|cdd|67651 : 168.0) no description available & (reliability: 1368.0) & (original description: Putative DPB2, Description = DNA polymerase epsilon subunit B, PFAM = PF04042;PF12213)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08156_561221-626140' '(at1g31360 : 969.0) Encodes a (d)NTP-dependent 3'->5' DNA helicase. This protein can also disrupt D loop structures and may mediate branch migration of Holliday junctions when tested in vitro. The unwinding activity of the enzyme depends on the presence of divalent cations (Mg2+, Mn2+, or Ca2+, but not Zn2+).(d)NTPs are also required with ATP and dATP supporting the greatest amount of DNA unwinding in vitro.; RECQ helicase L2 (RECQL2); CONTAINS InterPro DOMAIN/s: RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: DNA helicase (RECQl4A) (TAIR:AT1G10930.1); Has 27972 Blast hits to 27909 proteins in 2839 species: Archae - 320; Bacteria - 17784; Metazoa - 2771; Fungi - 1804; Plants - 1361; Viruses - 12; Other Eukaryotes - 3920 (source: NCBI BLink). & (gnl|cdd|35574 : 533.0) no description available & (gnl|cdd|30860 : 456.0) no description available & (reliability: 1938.0) & (original description: Putative MED34, Description = Mediator of RNA polymerase II transcription subunit 34, PFAM = PF00570;PF00270;PF00271;PF09382;PF16124)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08195_567258-579100' '(at1g29630 : 635.0) 5'-3' exonuclease family protein; FUNCTIONS IN: DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G18090.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37729 : 399.0) no description available & (gnl|cdd|29030 : 288.0) no description available & (q75li2|fen1b_orysa : 95.1) Flap endonuclease 1b (EC 3.1.-.-) (OsFEN-1b) - Oryza sativa (Rice) & (reliability: 1270.0) & (original description: Putative fenB, Description = Nuclease, Rad2 family, PFAM = PF00752;PF00867)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08228_429108-435231' '(at1g09815 : 139.0) polymerase delta 4 (POLD4); FUNCTIONS IN: DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase delta, subunit 4 (InterPro:IPR007218); Has 212 Blast hits to 212 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 52; Fungi - 86; Plants - 65; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative POLD4, Description = At1g09815, PFAM = PF04081)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08333_855663-859438' '(at1g77180 : 580.0) Encodes a putative transcriptional factor. Shows transcriptional activator activity in yeast. Involved in response to abscisic acid, salt and osmotic stress.; SKIP; CONTAINS InterPro DOMAIN/s: SKI-interacting protein, SKIP (InterPro:IPR017862), SKI-interacting protein SKIP, SNW domain (InterPro:IPR004015). & (gnl|cdd|37652 : 516.0) no description available & (gnl|cdd|66416 : 236.0) no description available & (reliability: 1160.0) & (original description: Putative SKIP, Description = SNW/SKI-interacting protein, PFAM = PF02731)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08526_118532-128218' '(at4g09730 : 665.0) Encodes RH39, a DEAD-box protein involved in the introduction of the hidden break into the 23S rRNA in the chloroplasts. Recombinant RH39 binds to the 23S rRNA in a segment adjacent to the stem-loop creating the hidden break target loop in a sequence-dependent manner. Has ATP-hydrolyzing activity at a Kcat of 5.3 /min in the presence of rRNA sequence. Mutants have drastically reduced level of level of ribulose 1,5-bisphosphate carboxylase/oxygenase.; RH39 (RH39); FUNCTIONS IN: LSU rRNA binding, ATPase activity, ATP-dependent helicase activity; INVOLVED IN: chloroplast ribulose bisphosphate carboxylase complex biogenesis, chloroplast rRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G06980.1); Has 40425 Blast hits to 39698 proteins in 3032 species: Archae - 675; Bacteria - 19989; Metazoa - 5933; Fungi - 4498; Plants - 2407; Viruses - 9; Other Eukaryotes - 6914 (source: NCBI BLink). & (gnl|cdd|35552 : 345.0) no description available & (gnl|cdd|30859 : 290.0) no description available & (p46942|db10_nicsy : 176.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1330.0) & (original description: Putative Os01g0184500, Description = DEAD-box ATP-dependent RNA helicase 39, PFAM = PF00271;PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08621_14316-34298' '(at1g35530 : 412.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: in 6 functions; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36020.1). & (gnl|cdd|31308 : 276.0) no description available & (gnl|cdd|35575 : 261.0) no description available & (reliability: 824.0) & (original description: Putative fml1, Description = Fanconi anemia group M protein, PFAM = PF04851)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08724_154599-164299' '(at1g20960 : 3081.0) embryo defective 1507 (emb1507); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1). & (gnl|cdd|36169 : 2147.0) no description available & (gnl|cdd|31397 : 521.0) no description available & (reliability: 6162.0) & (original description: Putative BRR2A, Description = DExH-box ATP-dependent RNA helicase DExH12, PFAM = PF02889;PF02889;PF00270;PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08724_490722-498192' '(at1g18800 : 272.0) Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP1. Bind histones Histone2A and Histone2B and associate with chromatin in vivo.; NAP1-related protein 2 (NRP2); FUNCTIONS IN: chromatin binding, histone binding, DNA binding; INVOLVED IN: cell proliferation, cell differentiation, nucleosome assembly, lateral root formation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: NAP1-related protein 1 (TAIR:AT1G74560.2); Has 4380 Blast hits to 3595 proteins in 373 species: Archae - 7; Bacteria - 141; Metazoa - 1827; Fungi - 714; Plants - 336; Viruses - 93; Other Eukaryotes - 1262 (source: NCBI BLink). & (gnl|cdd|36721 : 144.0) no description available & (gnl|cdd|85149 : 138.0) no description available & (reliability: 544.0) & (original description: Putative nrp, Description = Protein SET, PFAM = PF00956;PF00956)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf08755_356618-367804' '(at4g31210 : 1150.0) DNA topoisomerase, type IA, core; FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase type I activity, DNA binding, nucleic acid binding; INVOLVED IN: DNA topological change, DNA unwinding involved in replication, DNA metabolic process; LOCATED IN: chromosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA topoisomerase, type IA, zn finger (InterPro:IPR013498), DNA topoisomerase, type IA, core (InterPro:IPR000380), DNA topoisomerase, type IA, DNA-binding (InterPro:IPR003602), DNA topoisomerase, type IA, domain 2 (InterPro:IPR003601), DNA topoisomerase, type IA, central (InterPro:IPR013497), DNA topoisomerase, type IA, central region, subdomain 3 (InterPro:IPR013826), DNA topoisomerase I, bacterial-type (InterPro:IPR005733), Toprim domain, subgroup (InterPro:IPR006154), DNA topoisomerase, type IA, central region, subdomain 1 (InterPro:IPR013824), Toprim domain (InterPro:IPR006171); BEST Arabidopsis thaliana protein match is: topoisomerase 3alpha (TAIR:AT5G63920.1); Has 21441 Blast hits to 18441 proteins in 2923 species: Archae - 440; Bacteria - 10015; Metazoa - 1777; Fungi - 750; Plants - 256; Viruses - 35; Other Eukaryotes - 8168 (source: NCBI BLink). & (gnl|cdd|82830 : 825.0) no description available & (gnl|cdd|37167 : 484.0) no description available & (reliability: 2300.0) & (original description: Putative topA, Description = DNA topoisomerase 1, PFAM = PF01131;PF01396;PF01751;PF13368;PF13368)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf09123_291572-315362' '(at3g09100 : 861.0) mRNA capping enzyme family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422), ATP dependent DNA ligase, central (InterPro:IPR012310), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme, C-terminal (InterPro:IPR013846); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT5G01290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37597 : 349.0) no description available & (gnl|cdd|85390 : 238.0) no description available & (reliability: 1722.0) & (original description: Putative RNGTT, Description = mRNA-capping enzyme, PFAM = PF01331;PF03919;PF00782)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf09150_65892-80326' '(at3g06400 : 1535.0) Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature.; chromatin-remodeling protein 11 (CHR11); FUNCTIONS IN: in 7 functions; INVOLVED IN: cell growth, embryo sac development; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), SLIDE (InterPro:IPR015195), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2). & (q7g8y3|isw2_orysa : 1488.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35606 : 1007.0) no description available & (gnl|cdd|84584 : 339.0) no description available & (reliability: 2998.0) & (original description: Putative CHR11, Description = ISWI chromatin-remodeling complex ATPase CHR11, PFAM = PF00271;PF09111;PF09110;PF00176)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf09284_163519-167684' '(at5g46920 : 1110.0) Intron maturase, type II family protein; FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity; INVOLVED IN: RNA-dependent DNA replication, RNA splicing; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Intron maturase, type II (InterPro:IPR000442), RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477); BEST Arabidopsis thaliana protein match is: Intron maturase, type II family protein (TAIR:AT1G30010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|73157 : 154.0) no description available & (p38456|ymf11_marpo : 144.0) Hypothetical 83.1 kDa protein in COB-ATPA intergenic region (ORF 732) - Marchantia polymorpha (Liverwort) & (gnl|cdd|39965 : 105.0) no description available & (reliability: 2220.0) & (original description: Putative At5g46920, Description = Intron maturase, type II family protein, PFAM = PF01348)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf09547_121768-127150' '(at2g32010 : 815.0) Encodes an inositol polyphosphate 5í-phosphatase (5PTase). Mediating phosphoinositide signaling. Involved in establishment of foliar vein patterns.; CVP2 like 1 (CVL1); FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: leaf vascular tissue pattern formation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G05470.1). & (gnl|cdd|35786 : 225.0) no description available & (gnl|cdd|47467 : 197.0) no description available & (reliability: 1630.0) & (original description: Putative IP5P6, Description = Type IV inositol polyphosphate 5-phosphatase 6, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf09596_189561-197545' '(at2g37440 : 528.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell, root; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: CVP2 like 1 (TAIR:AT2G32010.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35786 : 231.0) no description available & (gnl|cdd|47467 : 194.0) no description available & (reliability: 1056.0) & (original description: Putative IP5P8, Description = Type I inositol polyphosphate 5-phosphatase 8, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf09649_204219-213533' '(at4g09730 : 683.0) Encodes RH39, a DEAD-box protein involved in the introduction of the hidden break into the 23S rRNA in the chloroplasts. Recombinant RH39 binds to the 23S rRNA in a segment adjacent to the stem-loop creating the hidden break target loop in a sequence-dependent manner. Has ATP-hydrolyzing activity at a Kcat of 5.3 /min in the presence of rRNA sequence. Mutants have drastically reduced level of level of ribulose 1,5-bisphosphate carboxylase/oxygenase.; RH39 (RH39); FUNCTIONS IN: LSU rRNA binding, ATPase activity, ATP-dependent helicase activity; INVOLVED IN: chloroplast ribulose bisphosphate carboxylase complex biogenesis, chloroplast rRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G06980.1); Has 40425 Blast hits to 39698 proteins in 3032 species: Archae - 675; Bacteria - 19989; Metazoa - 5933; Fungi - 4498; Plants - 2407; Viruses - 9; Other Eukaryotes - 6914 (source: NCBI BLink). & (gnl|cdd|35552 : 343.0) no description available & (gnl|cdd|30859 : 292.0) no description available & (p46942|db10_nicsy : 177.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1366.0) & (original description: Putative RH39, Description = DEAD-box ATP-dependent RNA helicase 39, PFAM = PF00271;PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf09654_305439-308451' '(at1g14900 : 83.2) Encodes a protein belonging to the subgroup of HMGA (high mobility group A) proteins that interact with A/T-rich stretches of DNA.; high mobility group A (HMGA); FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent, nucleosome assembly; LOCATED IN: cytosol, nuclear chromatin, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), A.T hook-like (InterPro:IPR020478), AT hook, DNA-binding motif (InterPro:IPR017956), High mobility group, HMG-I/HMG-Y (InterPro:IPR000116), Histone H1/H5 (InterPro:IPR005818); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT3G18035.1); Has 1377 Blast hits to 1228 proteins in 223 species: Archae - 0; Bacteria - 119; Metazoa - 428; Fungi - 179; Plants - 544; Viruses - 9; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative HMGa, Description = HMG-Y-related protein A, PFAM = PF00538;PF02178;PF02178;PF02178)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf09760_110998-146496' '(at4g25120 : 1173.0) Encodes a homolog of the yeast SRS2 (Suppressor of RAD Six-screen mutant 2) helicase. The Arabidopsis SRS2 is a functional 3í- to 5í-helicase. Biochemical studies show that SRS2 disrupts recombinogenic DNA intermediates and facilitates single strand annealing.; SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2 (SRS2); CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD-like, C-terminal (InterPro:IPR014017), Helicase, superfamily 1, UvrD-related (InterPro:IPR014016), DNA helicase, UvrD/REP type (InterPro:IPR000212); Has 26201 Blast hits to 22116 proteins in 2711 species: Archae - 259; Bacteria - 18888; Metazoa - 18; Fungi - 176; Plants - 81; Viruses - 13; Other Eukaryotes - 6766 (source: NCBI BLink). & (gnl|cdd|30559 : 364.0) no description available & (gnl|cdd|37319 : 194.0) no description available & (reliability: 2346.0) & (original description: Putative SRS2, Description = ATP-dependent DNA helicase SRS2-like protein At4g25120, PFAM = PF00580;PF13361)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf09908_17323-39416' '(at4g36050 : 425.0) endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: zinc ion binding, nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), Exodeoxyribonuclease III xth (InterPro:IPR004808), Zinc finger, GRF-type (InterPro:IPR010666); BEST Arabidopsis thaliana protein match is: apurinic endonuclease-redox protein (TAIR:AT2G41460.1); Has 8559 Blast hits to 7505 proteins in 2283 species: Archae - 114; Bacteria - 4844; Metazoa - 586; Fungi - 501; Plants - 129; Viruses - 2; Other Eukaryotes - 2383 (source: NCBI BLink). & (gnl|cdd|31052 : 164.0) no description available & (gnl|cdd|36508 : 94.3) no description available & (reliability: 850.0) & (original description: Putative BnaC01g02590D, Description = BnaC01g02590D protein, PFAM = PF03372;PF06839)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf09954_95884-123814' '(at1g08840 : 1354.0) embryo defective 2411 (emb2411); FUNCTIONS IN: ATP-dependent DNA helicase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD/REP type (InterPro:IPR000212), DNA replication factor Dna2 (InterPro:IPR014808); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1). & (gnl|cdd|37016 : 884.0) no description available & (gnl|cdd|72120 : 244.0) no description available & (reliability: 2708.0) & (original description: Putative emb2411, Description = Embryo defective protein 2411, PFAM = PF13086;PF13086;PF13087;PF08696;PF01930)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf09954_99466-103448' '(at1g08840 : 192.0) embryo defective 2411 (emb2411); FUNCTIONS IN: ATP-dependent DNA helicase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD/REP type (InterPro:IPR000212), DNA replication factor Dna2 (InterPro:IPR014808); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1). & (gnl|cdd|72120 : 159.0) no description available & (gnl|cdd|37016 : 142.0) no description available & (reliability: 384.0) & (original description: Putative emb2411, Description = DNA2-like helicase, PFAM = PF08696)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf09954_118326-128773' '(at1g08840 : 336.0) embryo defective 2411 (emb2411); FUNCTIONS IN: ATP-dependent DNA helicase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD/REP type (InterPro:IPR000212), DNA replication factor Dna2 (InterPro:IPR014808); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1). & (gnl|cdd|37016 : 289.0) no description available & (gnl|cdd|31309 : 167.0) no description available & (reliability: 672.0) & (original description: Putative dna2, Description = DNA replication ATP-dependent helicase/nuclease DNA2, PFAM = PF13087)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf10041_15798-39654' '(q9lre6|dpod1_orysa : 1003.0) DNA polymerase delta catalytic subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (at5g63960 : 969.0) EMBRYO DEFECTIVE 2780 (EMB2780); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: DNA replication, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B, pol2 (InterPro:IPR004578); BEST Arabidopsis thaliana protein match is: recovery protein 3 (TAIR:AT1G67500.2). & (gnl|cdd|36187 : 948.0) no description available & (gnl|cdd|84550 : 447.0) no description available & (reliability: 1938.0) & (original description: Putative DPD1, Description = DNA polymerase, PFAM = PF00136;PF14260)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf10144_219119-234567' '(at1g67500 : 1318.0) Encodes the catalytic subunit of DNA polymerase zeta.Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS).; recovery protein 3 (REV3); CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134); BEST Arabidopsis thaliana protein match is: DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases (TAIR:AT5G63960.1). & (gnl|cdd|36186 : 1085.0) no description available & (gnl|cdd|30766 : 361.0) no description available & (q9lre6|dpod1_orysa : 294.0) DNA polymerase delta catalytic subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (reliability: 2636.0) & (original description: Putative POLZ1, Description = DNA polymerase, PFAM = PF03104;PF03104;PF14260;PF00136)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf10331_32777-51750' '(at3g04260 : 1201.0) plastid transcriptionally active 3 (PTAC3); FUNCTIONS IN: DNA binding, nucleic acid binding; LOCATED IN: plastid chromosome, nucleus, chloroplast, nucleoid, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); BEST Arabidopsis thaliana protein match is: genomes uncoupled 1 (TAIR:AT2G31400.1); Has 11987 Blast hits to 8407 proteins in 477 species: Archae - 24; Bacteria - 285; Metazoa - 3588; Fungi - 1065; Plants - 3982; Viruses - 208; Other Eukaryotes - 2835 (source: NCBI BLink). & (reliability: 2402.0) & (original description: Putative oxer4, Description = DNA-binding protein PTAC3, PFAM = PF02037;PF13812)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf10785_185811-194378' '(at1g44900 : 1318.0) Encodes MCM2 (MINICHROMOSOME MAINTENANCE 2), a protein essential to embryo development. Overexpression results in altered root meristem function.; MINICHROMOSOME MAINTENANCE 2 (MCM2); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: nuclear chromatin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 2 (InterPro:IPR008045), MCM protein 2, N-terminal (InterPro:IPR021092); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1). & (gnl|cdd|35698 : 1071.0) no description available & (gnl|cdd|47677 : 666.0) no description available & (q43704|mcm3_maize : 320.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 2636.0) & (original description: Putative mcm2, Description = DNA helicase, PFAM = PF14551;PF17207;PF00493;PF12619)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf11009_31329-70967' '(at3g09660 : 1022.0) minichromosome maintenance 8 (MCM8); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: DNA-dependent DNA replication initiation, DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1); Has 4027 Blast hits to 3851 proteins in 539 species: Archae - 371; Bacteria - 134; Metazoa - 1249; Fungi - 930; Plants - 423; Viruses - 3; Other Eukaryotes - 917 (source: NCBI BLink). & (gnl|cdd|35701 : 736.0) no description available & (gnl|cdd|31434 : 475.0) no description available & (q43704|mcm3_maize : 290.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 2044.0) & (original description: Putative MCM8, Description = Probable DNA helicase MCM8, PFAM = PF00493;PF17207)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf11084_328752-356044' '(at2g41460 : 522.0) apurinic endonuclease-redox protein. It functions as an apurinic/apyrimidinic class II endonuclease, and is involved in DNA repair.; apurinic endonuclease-redox protein (ARP); CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), AP endonuclease, family 1, binding site (InterPro:IPR020847), Exodeoxyribonuclease III xth (InterPro:IPR004808), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase (TAIR:AT3G60950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31052 : 260.0) no description available & (p51173|apea_dicdi : 223.0) DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) (Class II apurinic/apyrimidinic(AP)-endonuclease) - Dictyostelium discoideum (Slime mold) & (gnl|cdd|36508 : 217.0) no description available & (reliability: 1044.0) & (original description: Putative ARP, Description = DNA-(apurinic or apyrimidinic site) lyase, chloroplastic, PFAM = PF02037;PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf11161_127311-193816' '(at1g58060 : 1639.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G58050.1); Has 14563 Blast hits to 8989 proteins in 1532 species: Archae - 4; Bacteria - 6119; Metazoa - 3212; Fungi - 1916; Plants - 1040; Viruses - 151; Other Eukaryotes - 2121 (source: NCBI BLink). & (gnl|cdd|36138 : 901.0) no description available & (gnl|cdd|31829 : 293.0) no description available & (reliability: 3278.0) & (original description: Putative At1g58060, Description = DExH-box ATP-dependent RNA helicase DExH7, chloroplastic, PFAM = PF04408;PF00271;PF00270;PF07717)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf11182_45835-50915' '(at1g68290 : 367.0) Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro.; endonuclease 2 (ENDO 2); FUNCTIONS IN: endonuclease activity, nucleic acid binding; INVOLVED IN: DNA catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C/P1 nuclease, core (InterPro:IPR008947), S1/P1 nuclease (InterPro:IPR003154); BEST Arabidopsis thaliana protein match is: endonuclease 4 (TAIR:AT4G21585.1); Has 730 Blast hits to 727 proteins in 207 species: Archae - 0; Bacteria - 188; Metazoa - 0; Fungi - 100; Plants - 121; Viruses - 2; Other Eukaryotes - 319 (source: NCBI BLink). & (gnl|cdd|85937 : 336.0) no description available & (reliability: 734.0) & (original description: Putative ENDO2, Description = Endonuclease 2, PFAM = PF02265)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf11182_46377-50739' '(at1g68290 : 315.0) Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro.; endonuclease 2 (ENDO 2); FUNCTIONS IN: endonuclease activity, nucleic acid binding; INVOLVED IN: DNA catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C/P1 nuclease, core (InterPro:IPR008947), S1/P1 nuclease (InterPro:IPR003154); BEST Arabidopsis thaliana protein match is: endonuclease 4 (TAIR:AT4G21585.1); Has 730 Blast hits to 727 proteins in 207 species: Archae - 0; Bacteria - 188; Metazoa - 0; Fungi - 100; Plants - 121; Viruses - 2; Other Eukaryotes - 319 (source: NCBI BLink). & (gnl|cdd|85937 : 287.0) no description available & (reliability: 630.0) & (original description: Putative ZEN1, Description = Zinnia endonuclease 1, PFAM = PF02265)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf11305_153537-157795' '(at5g04050 : 690.0) RNA-directed DNA polymerase (reverse transcriptase); FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity; INVOLVED IN: RNA-dependent DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477); BEST Arabidopsis thaliana protein match is: Intron maturase, type II family protein (TAIR:AT1G74350.1); Has 3089 Blast hits to 3057 proteins in 1086 species: Archae - 3; Bacteria - 2166; Metazoa - 8; Fungi - 43; Plants - 770; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (gnl|cdd|73157 : 122.0) no description available & (gnl|cdd|39965 : 88.2) no description available & (reliability: 1380.0) & (original description: Putative At5g04050, Description = RNA-directed DNA polymerase (Reverse transcriptase), PFAM = PF00078;PF01348)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf11379_139251-145825' '(at5g17690 : 184.0) Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state.; TERMINAL FLOWER 2 (TFL2); CONTAINS InterPro DOMAIN/s: Chromo domain subgroup (InterPro:IPR017984), Chromo domain-like (InterPro:IPR016197), Chromo shadow, subgroup (InterPro:IPR018125), Chromo domain (InterPro:IPR000953); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q339w7|lhp1_orysa : 162.0) Probable protein LIKE HETEROCHROMATIN PROTEIN1 (LHP1) - Oryza sativa (Rice) & (reliability: 368.0) & (original description: Putative LHP1, Description = Chromo domain protein LHP1, PFAM = PF00385)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf11417_26730-38035' '(at5g58720 : 313.0) smr (Small MutS Related) domain-containing protein; FUNCTIONS IN: damaged DNA binding, ATP binding; INVOLVED IN: mismatch repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Smr protein/MutS2 C-terminal (InterPro:IPR002625), Domain of unknown function DUF1771 (InterPro:IPR013899); BEST Arabidopsis thaliana protein match is: silencing defective 5 (TAIR:AT3G15390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 626.0) & (original description: Putative Zm.2642, Description = , PFAM = PF01713;PF08590)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf11512_142503-148440' '(at2g19480 : 370.0) This gene is predicted to encode a nucleosome assembly protein. Plant lines expressing an RNAi construct directed against this gene show a reduction in agrobacterium-mediated root transformation.; nucleosome assembly protein 1;2 (NAP1;2); CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: nucleosome assembly protein 1;3 (TAIR:AT5G56950.1). & (gnl|cdd|36720 : 296.0) no description available & (gnl|cdd|85149 : 264.0) no description available & (reliability: 740.0) & (original description: Putative NAP1, Description = Nucleosome assembly protein 1, PFAM = PF00956)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf11688_241488-250030' '(at1g65470 : 471.0) Chromatin Assembly Factor-1 (CAF-1) p150 subunit. Mutants have reduced heterochromatin content. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis.; FASCIATA 1 (FAS1); FUNCTIONS IN: histone binding; INVOLVED IN: in 11 processes; LOCATED IN: chromatin assembly complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chromatin assembly factor 1 subunit A (InterPro:IPR022043). & (gnl|cdd|39565 : 366.0) no description available & (reliability: 942.0) & (original description: Putative FAS1, Description = Chromatin assembly factor 1 subunit FAS1, PFAM = PF12253)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf11937_95854-161529' '(at1g08260 : 3110.0) Similar to POL2A, DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal, partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells.; TILTED 1 (TIL1); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: positive regulation of S phase of mitotic cell cycle, negative regulation of long-day photoperiodism, flowering, embryo development ending in seed dormancy; LOCATED IN: apoplast, epsilon DNA polymerase complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), Domain of unknown function DUF1744 (InterPro:IPR013697), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134); BEST Arabidopsis thaliana protein match is: DNA polymerase epsilon catalytic subunit (TAIR:AT2G27120.1); Has 2011 Blast hits to 1700 proteins in 652 species: Archae - 331; Bacteria - 603; Metazoa - 305; Fungi - 291; Plants - 83; Viruses - 58; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|37009 : 2832.0) no description available & (gnl|cdd|71918 : 433.0) no description available & (reliability: 6220.0) & (original description: Putative POL2A, Description = DNA polymerase epsilon catalytic subunit A, PFAM = PF08490;PF03104;PF00136)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf11937_95920-150433' '(at1g08260 : 2182.0) Similar to POL2A, DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal, partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells.; TILTED 1 (TIL1); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: positive regulation of S phase of mitotic cell cycle, negative regulation of long-day photoperiodism, flowering, embryo development ending in seed dormancy; LOCATED IN: apoplast, epsilon DNA polymerase complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), Domain of unknown function DUF1744 (InterPro:IPR013697), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134); BEST Arabidopsis thaliana protein match is: DNA polymerase epsilon catalytic subunit (TAIR:AT2G27120.1); Has 2011 Blast hits to 1700 proteins in 652 species: Archae - 331; Bacteria - 603; Metazoa - 305; Fungi - 291; Plants - 83; Viruses - 58; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|37009 : 1965.0) no description available & (gnl|cdd|71918 : 433.0) no description available & (reliability: 4364.0) & (original description: Putative ABO4, Description = DNA polymerase, PFAM = PF08490;PF00136)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf11937_150632-153225' '(gnl|cdd|37009 : 230.0) no description available & (at1g08260 : 221.0) Similar to POL2A, DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal, partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells.; TILTED 1 (TIL1); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: positive regulation of S phase of mitotic cell cycle, negative regulation of long-day photoperiodism, flowering, embryo development ending in seed dormancy; LOCATED IN: apoplast, epsilon DNA polymerase complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), Domain of unknown function DUF1744 (InterPro:IPR013697), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134); BEST Arabidopsis thaliana protein match is: DNA polymerase epsilon catalytic subunit (TAIR:AT2G27120.1); Has 2011 Blast hits to 1700 proteins in 652 species: Archae - 331; Bacteria - 603; Metazoa - 305; Fungi - 291; Plants - 83; Viruses - 58; Other Eukaryotes - 340 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative nimP, Description = DNA polymerase, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf12197_325456-330447' '(at1g11800 : 439.0) endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), Zinc finger, RanBP2-type (InterPro:IPR001876); Has 386 Blast hits to 366 proteins in 96 species: Archae - 0; Bacteria - 14; Metazoa - 170; Fungi - 14; Plants - 104; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (gnl|cdd|37967 : 251.0) no description available & (reliability: 878.0) & (original description: Putative Os12g0414900, Description = Endonuclease/Exonuclease/phosphatase family protein, expressed, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf12205_323772-336066' '(at1g29630 : 644.0) 5'-3' exonuclease family protein; FUNCTIONS IN: DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G18090.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37729 : 398.0) no description available & (gnl|cdd|29030 : 288.0) no description available & (q75li2|fen1b_orysa : 95.5) Flap endonuclease 1b (EC 3.1.-.-) (OsFEN-1b) - Oryza sativa (Rice) & (reliability: 1288.0) & (original description: Putative EXO1, Description = Exonuclease 1, PFAM = PF00867;PF00752)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf12372_99803-105228' '(at1g20920 : 1058.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G09620.1); Has 45185 Blast hits to 44279 proteins in 3076 species: Archae - 794; Bacteria - 22443; Metazoa - 6674; Fungi - 4936; Plants - 2699; Viruses - 11; Other Eukaryotes - 7628 (source: NCBI BLink). & (gnl|cdd|35555 : 867.0) no description available & (gnl|cdd|30859 : 337.0) no description available & (p46942|db10_nicsy : 310.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 2034.0) & (original description: Putative prp5, Description = Putative ATP-dependent RNA helicase DDX46, PFAM = PF00270;PF00271)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf12522_175274-178763' '(at5g46580 : 982.0) pentatricopeptide (PPR) repeat-containing protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT4G16390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 127.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1964.0) & (original description: Putative At5g46580, Description = Pentatricopeptide repeat-containing protein At5g46580, chloroplastic, PFAM = PF17177;PF13041;PF13041)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf12935_15949-46665' '(at1g20720 : 1043.0) RAD3-like DNA-binding helicase protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DEAD2 (InterPro:IPR010614), Helicase, superfamily 1/2, ATP-binding domain, DinG/Rad3-type (InterPro:IPR014013), Helicase-like, DEXD box c2 type (InterPro:IPR006554), DNA helicase (DNA repair), Rad3 type (InterPro:IPR013020), Helicase, ATP-dependent, c2 type (InterPro:IPR006555); BEST Arabidopsis thaliana protein match is: RAD3-like DNA-binding helicase protein (TAIR:AT1G20750.1); Has 2863 Blast hits to 2328 proteins in 675 species: Archae - 243; Bacteria - 679; Metazoa - 737; Fungi - 397; Plants - 210; Viruses - 5; Other Eukaryotes - 592 (source: NCBI BLink). & (gnl|cdd|36347 : 646.0) no description available & (gnl|cdd|31392 : 228.0) no description available & (reliability: 2086.0) & (original description: Putative glysoja_040274, Description = Fanconi anemia group J protein like, PFAM = PF13307;PF06733)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf12967_117682-135551' '(at3g53110 : 588.0) Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4); FUNCTIONS IN: RNA helicase activity, RNA-dependent ATPase activity, ATP-dependent helicase activity; INVOLVED IN: poly(A)+ mRNA export from nucleus, response to cold, response to heat, response to abscisic acid stimulus; LOCATED IN: nuclear envelope, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1); Has 40925 Blast hits to 40635 proteins in 3033 species: Archae - 702; Bacteria - 21081; Metazoa - 5720; Fungi - 4311; Plants - 2419; Viruses - 28; Other Eukaryotes - 6664 (source: NCBI BLink). & (gnl|cdd|35553 : 472.0) no description available & (gnl|cdd|30859 : 264.0) no description available & (p41380|if4a3_nicpl : 207.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1176.0) & (original description: Putative RH38, Description = DEAD-box ATP-dependent RNA helicase 38, PFAM = PF00271;PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf13167_233969-241988' '(at5g44635 : 1223.0) MINICHROMOSOME MAINTENANCE 6 (MCM6); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: shoot apex; EXPRESSED DURING: IL.00 inflorescence just visible; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 6 (InterPro:IPR008049); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35701 : 764.0) no description available & (gnl|cdd|47677 : 598.0) no description available & (q43704|mcm3_maize : 277.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 2446.0) & (original description: Putative mcm6, Description = DNA helicase, PFAM = PF17207;PF00493;PF14551)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf13231_292100-307480' '(at5g16850 : 568.0) Encodes the catalytic subunit of telomerase reverse transcriptase. Involved in telomere homeostasis. Homozygous double mutants with ATR show gross morphological defects over a period of generations. TERT shows Class II telomerase activity in vitro, indicating that it can initiate de novo telomerase synthesis on non-telomeric DNA, often using a preferred position within the telomerase-bound RNA.; telomerase reverse transcriptase (TERT); FUNCTIONS IN: telomerase activity, telomeric template RNA reverse transcriptase activity; INVOLVED IN: nucleolus organization, telomere maintenance via telomerase, chromosome organization, chromosome localization; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Telomere reverse transcriptase (InterPro:IPR003545), RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477), Telomerase ribonucleoprotein complex - RNA-binding domain (InterPro:IPR021891); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8lkw0|tert_orysa : 483.0) Telomerase reverse transcriptase (EC 2.7.7.49) (OsTERT) - Oryza sativa (Rice) & (gnl|cdd|36223 : 316.0) no description available & (gnl|cdd|73155 : 83.8) no description available & (reliability: 1136.0) & (original description: Putative TERT, Description = Telomerase reverse transcriptase, PFAM = PF12009;PF00078)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf13254_41656-47365' '(at5g17780 : 385.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G17720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36667 : 185.0) no description available & (gnl|cdd|84863 : 90.2) no description available & (reliability: 768.0) & (original description: Putative At5g17780, Description = Hydrolase, alpha/beta fold family protein, PFAM = PF00561)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf13601_43974-78447' '(at2g01130 : 1509.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G48650.2); Has 13137 Blast hits to 8990 proteins in 1526 species: Archae - 10; Bacteria - 5358; Metazoa - 2929; Fungi - 1766; Plants - 978; Viruses - 93; Other Eukaryotes - 2003 (source: NCBI BLink). & (gnl|cdd|36138 : 963.0) no description available & (gnl|cdd|83738 : 325.0) no description available & (reliability: 3018.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF00035;PF00271;PF07717;PF04408;PF00270)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf13601_44210-67615' '(at2g01130 : 1176.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G48650.2); Has 13137 Blast hits to 8990 proteins in 1526 species: Archae - 10; Bacteria - 5358; Metazoa - 2929; Fungi - 1766; Plants - 978; Viruses - 93; Other Eukaryotes - 2003 (source: NCBI BLink). & (gnl|cdd|36138 : 868.0) no description available & (gnl|cdd|83738 : 310.0) no description available & (reliability: 2352.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF00270;PF00271;PF04408;PF07717)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf13679_2875-10876' '(at5g65090 : 590.0) Encodes a protein involved in root hair morphogenesis and tip growth. Required for restricting both the size of the root-hair initiation site and the width of the root hairs during the transition to tip growth, but, apparently, is not required for normal subsequent tip growth.; BRISTLED 1 (BST1); FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: root epidermal cell differentiation, root hair cell differentiation, cell tip growth; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT5G04980.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35786 : 237.0) no description available & (gnl|cdd|47467 : 202.0) no description available & (reliability: 1180.0) & (original description: Putative IP5P5, Description = Type I inositol polyphosphate 5-phosphatase 5, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf13695_206003-213375' '(at5g41880 : 610.0) POLA3; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication, synthesis of RNA primer, DNA replication; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA primase, small subunit (InterPro:IPR002755), DNA primase, small subunit, eukaryotic/archaeal (InterPro:IPR014052); Has 510 Blast hits to 504 proteins in 249 species: Archae - 95; Bacteria - 0; Metazoa - 124; Fungi - 138; Plants - 44; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (gnl|cdd|38062 : 441.0) no description available & (gnl|cdd|80310 : 218.0) no description available & (reliability: 1220.0) & (original description: Putative Prim1, Description = DNA primase small subunit, PFAM = PF01896)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf14009_155760-159574' '(at1g12700 : 398.0) ATP binding;nucleic acid binding;helicases; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: embryo; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), DNA/RNA helicase, C-terminal (InterPro:IPR001650); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G12300.1); Has 84744 Blast hits to 32036 proteins in 2584 species: Archae - 123; Bacteria - 11324; Metazoa - 2691; Fungi - 2451; Plants - 63733; Viruses - 4; Other Eukaryotes - 4418 (source: NCBI BLink). & (q76c99|rf1_orysa : 251.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 796.0) & (original description: Putative , Description = DNA repair protein XRCC4, C-terminal, PFAM = PF01535;PF01535;PF13041;PF13041;PF13041;PF12854;PF12854;PF12854)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf14295_1405-19323' '(at5g16270 : 328.0) Encodes a SCC1/REC8 ortholog that may be involved in mitosis and may represent a mitotic cohesin.; sister chromatid cohesion 1 protein 4 (SYN4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: sister chromatid cohesion; LOCATED IN: nuclear chromosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rad21/Rec8 like protein, C-terminal (InterPro:IPR006909), Rad21/Rec8 like protein, N-terminal (InterPro:IPR006910); BEST Arabidopsis thaliana protein match is: Rad21/Rec8-like family protein (TAIR:AT3G59550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36427 : 207.0) no description available & (gnl|cdd|68400 : 153.0) no description available & (reliability: 656.0) & (original description: Putative rec8, Description = Double-strand-break repair protein rad21-like protein, PFAM = PF04824;PF04825)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf14781_52162-56552' '(at2g01900 : 416.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: hypocotyl, sepal, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT2G37440.1); Has 2320 Blast hits to 2027 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 735; Fungi - 544; Plants - 769; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink). & (gnl|cdd|35786 : 259.0) no description available & (gnl|cdd|47467 : 225.0) no description available & (reliability: 832.0) & (original description: Putative IP5P9, Description = Type IV inositol polyphosphate 5-phosphatase 9, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf15579_82325-86666' '(at2g37440 : 325.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell, root; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: CVP2 like 1 (TAIR:AT2G32010.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35786 : 244.0) no description available & (gnl|cdd|47467 : 207.0) no description available & (reliability: 650.0) & (original description: Putative IP5P9, Description = Type IV inositol polyphosphate 5-phosphatase 9, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf16733_162465-186776' '(at5g08110 : 1093.0) nucleic acid binding;ATP-dependent helicases;ATP binding;helicases;ATP-dependent helicases; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), Ubiquitin supergroup (InterPro:IPR019955), Protein of unknown function DUF1998 (InterPro:IPR018973), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G40700.1); Has 14986 Blast hits to 14312 proteins in 2354 species: Archae - 833; Bacteria - 9982; Metazoa - 976; Fungi - 914; Plants - 633; Viruses - 5; Other Eukaryotes - 1643 (source: NCBI BLink). & (gnl|cdd|39353 : 708.0) no description available & (gnl|cdd|31398 : 533.0) no description available & (reliability: 2186.0) & (original description: Putative BnaA10g23250D, Description = BnaA10g23250D protein, PFAM = PF00270;PF09369;PF00271)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf17442_21242-45682' '(at3g10690 : 1281.0) DNA GYRASE A (GYRA); FUNCTIONS IN: DNA topoisomerase activity, catalytic activity, ATP binding; INVOLVED IN: DNA topological change, DNA metabolic process; LOCATED IN: mitochondrion, chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA gyrase, subunit A (InterPro:IPR005743), DNA topoisomerase, type IIA, subunit A/C-terminal (InterPro:IPR002205), DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta (InterPro:IPR013758), DNA topoisomerase, type IIA, subunit A, alpha-helical (InterPro:IPR013757), DNA topoisomerase, type IIA, central (InterPro:IPR013760), DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel (InterPro:IPR006691); BEST Arabidopsis thaliana protein match is: topoisomerase II (TAIR:AT3G23890.1); Has 22353 Blast hits to 21396 proteins in 3265 species: Archae - 84; Bacteria - 12907; Metazoa - 182; Fungi - 204; Plants - 111; Viruses - 99; Other Eukaryotes - 8766 (source: NCBI BLink). & (q7xzf7|gyra_orysa : 1234.0) Probable DNA gyrase subunit A, chloroplast/mitochondrial precursor (EC 5.99.1.3) - Oryza sativa (Rice) & (gnl|cdd|81634 : 1072.0) no description available & (gnl|cdd|35576 : 467.0) no description available & (reliability: 2562.0) & (original description: Putative GYRA, Description = DNA gyrase subunit A, chloroplastic/mitochondrial, PFAM = PF03989;PF03989;PF03989;PF03989;PF03989;PF03989;PF00521)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf17730_2564-26533' '(at2g30800 : 1301.0) Has RNA or DNA helicase activity and expressed specifically in tapetum and vascular tissue. First identified member of a new group of the mle helicase group of the DEAH family.; helicase in vascular tissue and tapetum (HVT1); CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Ankyrin repeat-containing domain (InterPro:IPR020683), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Single-stranded nucleic acid binding R3H (InterPro:IPR001374), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: nuclear DEIH-boxhelicase (TAIR:AT1G06670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36138 : 465.0) no description available & (gnl|cdd|31829 : 274.0) no description available & (reliability: 2602.0) & (original description: Putative HVT1, Description = DExH-box ATP-dependent RNA helicase DExH6, PFAM = PF04408;PF00271;PF01424)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf18951_88442-101993' '(at1g67630 : 705.0) DNA polymerase alpha 2 (POLA2); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase alpha, subunit B N-terminal (InterPro:IPR013627), DNA polymerase alpha, subunit B (InterPro:IPR016722), DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 415 Blast hits to 412 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 140; Plants - 46; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|36838 : 438.0) no description available & (gnl|cdd|34811 : 213.0) no description available & (reliability: 1410.0) & (original description: Putative POLA2, Description = DNA polymerase alpha subunit B, PFAM = PF04042;PF08418)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf18951_99492-101752' '(at1g67630 : 124.0) DNA polymerase alpha 2 (POLA2); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase alpha, subunit B N-terminal (InterPro:IPR013627), DNA polymerase alpha, subunit B (InterPro:IPR016722), DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 415 Blast hits to 412 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 140; Plants - 46; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|36838 : 88.9) no description available & (reliability: 248.0) & (original description: Putative POLA2, Description = DNA polymerase alpha subunit B, PFAM = )' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf19872_34957-45449' '(at3g27730 : 1402.0) DNA helicase required for interference-sensitive meiotic crossover events.; ROCK-N-ROLLERS (RCK); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT5G61140.2); Has 10425 Blast hits to 9108 proteins in 1594 species: Archae - 861; Bacteria - 4193; Metazoa - 1363; Fungi - 1417; Plants - 555; Viruses - 24; Other Eukaryotes - 2012 (source: NCBI BLink). & (gnl|cdd|36170 : 781.0) no description available & (gnl|cdd|31397 : 326.0) no description available & (reliability: 2804.0) & (original description: Putative MER3, Description = DExH-box ATP-dependent RNA helicase DExH17, PFAM = PF00270;PF02889;PF00271)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf19975_198035-216841' '(at1g08130 : 968.0) Encodes the Arabidopsis DNA ligase 1 that provides the major DNA ligase activity in cells and plays a key role in both DNA replication and excision repair pathways. Indispensable for cell viability. AtLIG1 expresses one major and two minor mRNA transcripts differing only in the length of the 5' untranslated leader sequences preceding a common ORF. Translation from the first in-frame start codon produces an AtLIG1 isoform that is targeted exclusively to the mitochondria. Translation initiation from the second in-frame start codon produces an AtLIG1 isoform targeted only to the nucleus.; DNA ligase 1 (LIG1); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, DNA replication, DNA recombination; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: ATP-dependent DNA ligase (TAIR:AT1G49250.1); Has 3556 Blast hits to 3521 proteins in 879 species: Archae - 298; Bacteria - 1538; Metazoa - 375; Fungi - 434; Plants - 112; Viruses - 159; Other Eukaryotes - 640 (source: NCBI BLink). & (gnl|cdd|36185 : 924.0) no description available & (gnl|cdd|80824 : 458.0) no description available & (reliability: 1936.0) & (original description: Putative LIG1, Description = DNA ligase 1, PFAM = PF01068;PF04675;PF04679)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf20773_135035-146659' '(at5g62410 : 1414.0) SMC2-1 (SMC2); structural maintenance of chromosomes 2 (SMC2); FUNCTIONS IN: transporter activity; INVOLVED IN: chromosome organization; LOCATED IN: condensin complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: Structural maintenance of chromosomes (SMC) family protein (TAIR:AT3G47460.1); Has 126046 Blast hits to 65003 proteins in 3391 species: Archae - 1784; Bacteria - 23628; Metazoa - 52968; Fungi - 10094; Plants - 6737; Viruses - 431; Other Eukaryotes - 30404 (source: NCBI BLink). & (gnl|cdd|36151 : 1315.0) no description available & (gnl|cdd|31389 : 497.0) no description available & (reliability: 2828.0) & (original description: Putative cape, Description = Structural maintenance of chromosomes protein 2, PFAM = PF02463;PF02463;PF06470)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf23998_124384-133920' '(at2g43900 : 1401.0) Endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: inositol-polyphosphate 5-phosphatase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: sperm cell, male gametophyte, flower, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Endonuclease/exonuclease/phosphatase family protein (TAIR:AT1G05630.2); Has 8064 Blast hits to 7016 proteins in 490 species: Archae - 18; Bacteria - 518; Metazoa - 2458; Fungi - 805; Plants - 729; Viruses - 32; Other Eukaryotes - 3504 (source: NCBI BLink). & (gnl|cdd|35786 : 227.0) no description available & (gnl|cdd|47467 : 221.0) no description available & (reliability: 2802.0) & (original description: Putative Sb04g018960, Description = Putative uncharacterized protein Sb04g018960, PFAM = PF03372)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf24082_52264-56544' '(at3g50390 : 226.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G26490.1); Has 33178 Blast hits to 17374 proteins in 678 species: Archae - 38; Bacteria - 5184; Metazoa - 12049; Fungi - 7688; Plants - 3936; Viruses - 0; Other Eukaryotes - 4283 (source: NCBI BLink). & (gnl|cdd|29257 : 120.0) no description available & (gnl|cdd|35487 : 81.4) no description available & (reliability: 428.0) & (original description: Putative PGSC0003DMG400026464, Description = F-box and wd40 domain protein, putative, PFAM = PF11715;PF00400;PF00400)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf25633_70475-87017' '(gnl|cdd|30860 : 523.0) no description available & (gnl|cdd|35572 : 419.0) no description available & (at1g60930 : 313.0) AtRECQ4B mutant showed no sensitivity to DNA damaging agents.Involved in homologous recombination.; RECQ helicase L4B (RECQ4B); FUNCTIONS IN: in 8 functions; INVOLVED IN: DNA recombination; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), HRDC-like (InterPro:IPR010997), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: DNA helicase (RECQl4A) (TAIR:AT1G10930.1); Has 28171 Blast hits to 28052 proteins in 2731 species: Archae - 327; Bacteria - 17551; Metazoa - 2839; Fungi - 1949; Plants - 1368; Viruses - 5; Other Eukaryotes - 4132 (source: NCBI BLink). & (reliability: 626.0) & (original description: Putative Sb02g043160, Description = Putative uncharacterized protein Sb02g043160, PFAM = PF00271;PF00570;PF14493;PF00270;PF09382;PF16124)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf27283_13359-15454' '(at1g12700 : 155.0) ATP binding;nucleic acid binding;helicases; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: embryo; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), DNA/RNA helicase, C-terminal (InterPro:IPR001650); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G12300.1); Has 84744 Blast hits to 32036 proteins in 2584 species: Archae - 123; Bacteria - 11324; Metazoa - 2691; Fungi - 2451; Plants - 63733; Viruses - 4; Other Eukaryotes - 4418 (source: NCBI BLink). & (q76c99|rf1_orysa : 119.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 310.0) & (original description: Putative , Description = , PFAM = PF13041;PF13041;PF01535)' T '28.1' 'DNA.synthesis/chromatin structure' 'niben101scf32851_68331-84629' '(at5g06310 : 311.0) Encodes AtPOT1b. Note on nomenclature: different names have been given to Arabidopsis POT-like genes (Kuchar and Fajkus, 2004; Shakirov et al, 2005; Tani and Murata, 2005). According to a unifying nomenclature (Surovtseva et al, 2007), At2g05210 (previously named AtPOT1) is designated AtPOT1a, while At5g06310 (previously named AtPOT2) is designated AtPOT1b.; protection of telomeres 1b (AtPOT1b); FUNCTIONS IN: DNA binding; INVOLVED IN: telomere maintenance; LOCATED IN: nuclear chromosome, telomeric region; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Telomere end binding protein (InterPro:IPR011564); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G05210.3); Has 198 Blast hits to 197 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 0; Plants - 83; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|39954 : 179.0) no description available & (gnl|cdd|72969 : 113.0) no description available & (reliability: 590.0) & (original description: Putative POT1B, Description = Protection of telomeres protein 1b, PFAM = PF16686;PF02765)' T '28.1.1' 'DNA.synthesis/chromatin structure.retrotransposon/transposase' '' '' '28.1.1.1' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.gypsy-like retrotransposon' '' '' '28.1.1.2' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.non-LTR retrotransposon' '' '' '28.1.1.3' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.copia-like retrotransposon' '' '' '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.3scaffold14467_19812-22139' '(at1g19260 : 82.4) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative Os12g0528500, Description = Os12g0528500 protein, PFAM = )' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.3scaffold45542_8981-11796' '(at1g19260 : 230.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative PGSC0003DMG400002338, Description = HAT family dimerisation domain containing protein, PFAM = PF05699)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.3scaffold51492_9268-11756' '(at4g09660 : 109.0) CONTAINS InterPro DOMAIN/s: Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: TTF-type zinc finger protein with HAT dimerisation domain (TAIR:AT1G19260.1); Has 839 Blast hits to 796 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 438; Fungi - 0; Plants - 401; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.3scaffold52973_7711-10956' '(at5g33406 : 245.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 490.0) & (original description: Putative BnaA08g29420D, Description = BnaA08g29420D protein, PFAM = PF05699)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.3scaffold65538_295-2937' '(at5g33406 : 108.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.3scaffold65769_7705-10348' '(at5g33406 : 161.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative , Description = Putative transposase, PFAM = PF05699)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.3scaffold75927_1704-7783' '(at1g18560 : 812.0) BED zinc finger ;hAT family dimerisation domain; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT3G42170.1); Has 1077 Blast hits to 1005 proteins in 94 species: Archae - 0; Bacteria - 2; Metazoa - 242; Fungi - 210; Plants - 602; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|36337 : 264.0) no description available & (p08770|tra1_maize : 134.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (reliability: 1624.0) & (original description: Putative BnaA09g44510D, Description = BnaA09g44510D protein, PFAM = PF05699;PF14372;PF02892)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.3scaffold110042_1-2514' '(at5g33406 : 140.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative At5g33406, Description = HAT family dimerisation domain containing protein, PFAM = PF05699)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.3scaffold118789_1-2258' '(at1g19260 : 246.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative At1g19260, Description = General transcription factor 2-related zinc finger protein, PFAM = PF14291)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.3scaffold128885_1-1706' '(at5g33406 : 94.4) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative BnaA07g02460D, Description = BnaA07g02460D protein, PFAM = PF04937)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.3scaffold198757_1-512' '(at5g33406 : 149.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative At5g33406, Description = BnaA05g17040D protein, PFAM = )' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.5scaffold78_647276-649764' '(at1g19260 : 126.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative At1g19260, Description = H1005F08.16 protein, PFAM = )' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.5scaffold469_347070-349979' '(at5g33406 : 165.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 330.0) & (original description: Putative At5g33406, Description = BnaA08g29420D protein, PFAM = PF05699)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.5scaffold1190_362455-365204' '(at5g33406 : 151.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative At5g33406, Description = HAT family dimerisation domain containing protein, PFAM = PF05699)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.5scaffold1255_161131-163553' '(at1g19260 : 113.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative At1g19260, Description = H1005F08.16 protein, PFAM = )' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.5scaffold1287_13067-16182' '(at1g19260 : 175.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative , Description = Putative hAT family dimerisation domain containing protein, identical, PFAM = PF14291)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.5scaffold3624_223535-226730' '(at5g33406 : 123.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative Os05g0414501, Description = Os05g0414501 protein, PFAM = PF05699)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.5scaffold4287_60052-64008' '(at5g33406 : 340.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|68508 : 141.0) no description available & (reliability: 680.0) & (original description: Putative BnaC02g38090D, Description = BnaC02g38090D protein, PFAM = PF05699;PF04937)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.5scaffold5068_156223-160276' '(at5g33406 : 410.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|68508 : 150.0) no description available & (reliability: 820.0) & (original description: Putative BnaC02g38090D, Description = BnaC02g38090D protein, PFAM = PF05699;PF04937)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.5scaffold10479_4532-7156' '(at5g33406 : 177.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative BnaC06g16970D, Description = BnaC06g16970D protein, PFAM = )' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'nbv0.5scaffold28858_1-1106' '(at5g33406 : 115.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative At5g33406, Description = BnaA01g28240D protein, PFAM = )' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00000710ctg000_793-3503' '(at3g29765 : 196.0) General transcription factor 2-related zinc finger protein; BEST Arabidopsis thaliana protein match is: TTF-type zinc finger protein with HAT dimerisation domain (TAIR:AT1G19260.1); Has 937 Blast hits to 895 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 559; Fungi - 1; Plants - 375; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative At1g19260, Description = General transcription factor 2-related zinc finger protein, PFAM = PF14291)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00001101ctg003_1-1846' '(at5g33406 : 109.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative Os05g0414501, Description = Os05g0414501 protein, PFAM = PF05699)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00004833ctg008_2353-5460' '(at1g19260 : 170.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative PGSC0003DMG400002338, Description = HAT family dimerisation domain containing protein, PFAM = PF05699)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00004928ctg000_5628-7184' '(at5g33406 : 95.1) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00006011ctg025_7480-10122' '(at5g33406 : 108.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00008873ctg007_269-2942' '(at5g33406 : 89.4) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative At5g33406, Description = BnaA08g29420D protein, PFAM = PF05699)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00010129ctg002_25337-27675' '(at1g19260 : 94.4) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative Os05g0233900, Description = Os05g0233900 protein, PFAM = PF05699)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00012812ctg004_11594-14174' '(at5g33406 : 119.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative PGSC0003DMG400008198, Description = DNA binding protein, putative, PFAM = PF05699)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00015177ctg016_856-3382' '(at1g19260 : 135.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative At1g19260, Description = Putative hAT family dimerisation domain containing protein, identical, PFAM = )' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00021368ctg004_1-1474' '(at1g19260 : 145.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative At1g19260, Description = HAT family dimerisation domain containing protein, PFAM = PF14291)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00023548ctg000_377-3102' '(at5g33406 : 139.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative BnaC06g16970D, Description = BnaC06g16970D protein, PFAM = )' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00029274ctg003_9316-12671' '(at5g33406 : 252.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 504.0) & (original description: Putative At5g33406, Description = BnaA04g09050D protein, PFAM = PF05699)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00031674ctg002_1028-3661' '(at5g33406 : 159.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative PGSC0003DMG400008198, Description = HAT family dimerisation domain containing protein, PFAM = PF05699)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben044scf00040152ctg005_1-561' '(at5g33406 : 114.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative At5g33406, Description = BnaA08g29420D protein, PFAM = )' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf00113_461506-464042' '(at3g29765 : 198.0) General transcription factor 2-related zinc finger protein; BEST Arabidopsis thaliana protein match is: TTF-type zinc finger protein with HAT dimerisation domain (TAIR:AT1G19260.1); Has 937 Blast hits to 895 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 559; Fungi - 1; Plants - 375; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative At1g19260, Description = General transcription factor 2-related zinc finger protein, PFAM = PF14291)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf00149_597262-600915' '(at3g13020 : 419.0) hAT transposon superfamily protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily protein (TAIR:AT3G13030.3); Has 668 Blast hits to 634 proteins in 22 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 2; Plants - 657; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|68508 : 180.0) no description available & (reliability: 838.0) & (original description: Putative At3g13030, Description = AT3G13030 protein, PFAM = PF05699;PF04937)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf00247_275131-286820' '(at1g19260 : 201.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative PGSC0003DMG400002338, Description = Putative hAT family dimerisation domain containing protein, identical, PFAM = PF05699)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf00613_434285-438435' '(at3g13020 : 408.0) hAT transposon superfamily protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily protein (TAIR:AT3G13030.3); Has 668 Blast hits to 634 proteins in 22 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 2; Plants - 657; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|68508 : 181.0) no description available & (reliability: 816.0) & (original description: Putative At3g13030, Description = AT3G13030 protein, PFAM = PF04937;PF02892;PF05699)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf00725_750965-757044' '(at1g18560 : 825.0) BED zinc finger ;hAT family dimerisation domain; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT3G42170.1); Has 1077 Blast hits to 1005 proteins in 94 species: Archae - 0; Bacteria - 2; Metazoa - 242; Fungi - 210; Plants - 602; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|36337 : 261.0) no description available & (p08770|tra1_maize : 134.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (reliability: 1650.0) & (original description: Putative BnaA09g44510D, Description = BnaA09g44510D protein, PFAM = PF05699;PF14372;PF02892)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf00878_108116-110741' '(at1g19260 : 130.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative At1g19260, Description = H1005F08.16 protein, PFAM = )' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf02386_41044-43798' '(at5g33406 : 89.4) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative At5g33406, Description = BnaA04g09050D protein, PFAM = PF05699)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf02668_42731-45627' '(at5g33406 : 301.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 602.0) & (original description: Putative Sb02g028966, Description = Putative uncharacterized protein Sb02g028966, PFAM = PF05699)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf02668_42980-46332' '(at3g22220 : 250.0) hAT transposon superfamily; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68508 : 153.0) no description available & (reliability: 464.0) & (original description: Putative Sb08g005613, Description = Putative uncharacterized protein Sb08g005613, PFAM = PF04937)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf03576_141773-144390' '(at5g33406 : 176.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative At5g33406, Description = HAT family dimerisation domain containing protein, PFAM = PF05699)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf03810_834015-836802' '(at5g33406 : 106.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative At5g33406, Description = HAT family dimerization domain-containing protein, PFAM = )' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf04549_982837-985726' '(at1g19260 : 249.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative At1g19260, Description = General transcription factor 2-related zinc finger protein, PFAM = PF14291)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf04697_191659-193541' '(at5g33406 : 288.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 576.0) & (original description: Putative Sb02g028966, Description = Putative uncharacterized protein Sb02g028966, PFAM = PF05699)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf06809_144113-146559' '(at4g09660 : 100.0) CONTAINS InterPro DOMAIN/s: Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: TTF-type zinc finger protein with HAT dimerisation domain (TAIR:AT1G19260.1); Has 839 Blast hits to 796 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 438; Fungi - 0; Plants - 401; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative PGSC0003DMG400002338, Description = H1005F08.16 protein, PFAM = )' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf08610_10210-19772' '(gnl|cdd|68508 : 113.0) no description available & (at5g33406 : 107.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative BnaC02g22000D, Description = BnaC02g22000D protein, PFAM = PF04937)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf09116_196562-199377' '(at1g19260 : 222.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative PGSC0003DMG400002338, Description = HAT family dimerisation domain containing protein, PFAM = PF05699)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf10735_18677-21919' '(at5g33406 : 239.0) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 478.0) & (original description: Putative At5g33406, Description = BnaA04g09050D protein, PFAM = PF05699)' T '28.1.1.4' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase' 'niben101scf28395_58066-60890' '(at1g19260 : 91.3) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative)' T '28.1.1.5' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.CACTA-like transposase' '' '' '28.1.1.6' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.Mariner-like transposase' '' '' '28.1.1.7' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.mutator-like transposase' '' '' '28.1.1.8' 'DNA.synthesis/chromatin structure.retrotransposon/transposase.ac-like transposase' '' '' '28.1.3' 'DNA.synthesis/chromatin structure.histone' 'niben101scf02831_270526-279565' '(at1g17520 : 181.0) Homeodomain-like/winged-helix DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like/winged-helix DNA-binding family protein (TAIR:AT1G72740.1); Has 882 Blast hits to 875 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 109; Fungi - 89; Plants - 618; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative myb5, Description = Histone H1, PFAM = PF00249;PF00538)' T '28.1.3' 'DNA.synthesis/chromatin structure.histone' 'niben101scf09170_151921-162244' '(at1g17520 : 183.0) Homeodomain-like/winged-helix DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like/winged-helix DNA-binding family protein (TAIR:AT1G72740.1); Has 882 Blast hits to 875 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 109; Fungi - 89; Plants - 618; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative myb5, Description = Putative MYB transcription factor, PFAM = PF00249;PF00538)' T '28.1.3' 'DNA.synthesis/chromatin structure.histone' 'niben101scf26781_1-6641' '(at1g17520 : 191.0) Homeodomain-like/winged-helix DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like/winged-helix DNA-binding family protein (TAIR:AT1G72740.1); Has 882 Blast hits to 875 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 109; Fungi - 89; Plants - 618; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative myb68, Description = MYB-related protein, PFAM = PF00538;PF13921)' T '28.1.3.1' 'DNA.synthesis/chromatin structure.histone.H1' 'niben101scf03735_637575-640441' '(at2g18050 : 80.1) encodes a structurally divergent linker histone whose gene expression is induced by dehydration and ABA.; histone H1-3 (HIS1-3); FUNCTIONS IN: DNA binding, nucleosomal DNA binding; INVOLVED IN: response to water deprivation, nucleosome assembly, response to abscisic acid stimulus; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Histone H1/H5 (InterPro:IPR005818); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT2G30620.1); Has 1479 Blast hits to 1252 proteins in 183 species: Archae - 0; Bacteria - 2; Metazoa - 726; Fungi - 41; Plants - 482; Viruses - 0; Other Eukaryotes - 228 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative H1d, Description = Histone H1D, PFAM = PF00538)' T '28.1.3.2' 'DNA.synthesis/chromatin structure.histone.core' '' '' '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'nbv0.3scaffold20138_9241-12077' '(gnl|cdd|36955 : 111.0) no description available & (gnl|cdd|47734 : 108.0) no description available & (at1g08170 : 105.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT2G28720.1); Has 3412 Blast hits to 3396 proteins in 350 species: Archae - 0; Bacteria - 51; Metazoa - 2306; Fungi - 230; Plants - 467; Viruses - 0; Other Eukaryotes - 358 (source: NCBI BLink). & (p27807|h2b1_wheat : 103.0) Histone H2B.1 - Triticum aestivum (Wheat) & (reliability: 202.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'nbv0.3scaffold111879_1-2116' '(o22582|h2b_goshi : 169.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at3g45980 : 164.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases as well as the UBC1 and UBC2 E2 ubiquitin conjugating enzymes. Lysine 146 appears to be the site of the ubiquitin addition.; HTB9; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT1G07790.1); Has 3616 Blast hits to 3469 proteins in 351 species: Archae - 0; Bacteria - 64; Metazoa - 2275; Fungi - 213; Plants - 487; Viruses - 0; Other Eukaryotes - 577 (source: NCBI BLink). & (gnl|cdd|36955 : 139.0) no description available & (gnl|cdd|47734 : 137.0) no description available & (reliability: 328.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'nbv0.5scaffold88_949484-1075258' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 140.0) no description available & (gnl|cdd|47734 : 135.0) no description available & (reliability: 318.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'nbv0.5scaffold8515_5000-7473' '(o65759|h2ax_cicar : 177.0) Histone H2AX - Cicer arietinum (Chickpea) (Garbanzo) & (gnl|cdd|28955 : 174.0) no description available & (gnl|cdd|36967 : 171.0) no description available & (at1g08880 : 169.0) Encodes HTA5, a histone H2A protein. H2AX is a meiosis-specific isoform of histone H2A. Upon DSB formation, rapid accumulation of phosphorylated H2AX (γ-H2AX) occurs around the break site. H2AX foci accumulate in early G2. Immunolocalization studies in spread preparations of wild-type meiocytes at G2/early leptotene revealed the accumulation of numerous rather diffuse γ-H2AX foci throughout the chromatin. However, their accumulation is not contemporaneous with that of AtSPO11-1. At 3 h post-S, no γ-H2AX foci are detected. During the 3- to 5-h window when AtSPO11-1 foci rapidly disappear, there is an equally swift accumulation of γ-H2AX to a maximum of >50 diffuse foci. The level of γH2AX then remains constant for a further 13 h before undergoing a gradual decrease to 10ñ20 foci in the 18- to 24-h post-S period. By 30 h the foci have disappeared from the chromatin.; H2AXA; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: gamma histone variant H2AX (TAIR:AT1G54690.1); Has 3916 Blast hits to 3911 proteins in 363 species: Archae - 0; Bacteria - 0; Metazoa - 2550; Fungi - 318; Plants - 612; Viruses - 4; Other Eukaryotes - 432 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative h2b, Description = Histone H2A, PFAM = PF16211;PF00125)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben044scf00000678ctg002_4717-76363' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 138.0) no description available & (gnl|cdd|47734 : 135.0) no description available & (reliability: 318.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben044scf00007991ctg022_5611-7831' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 138.0) no description available & (gnl|cdd|47734 : 133.0) no description available & (reliability: 318.0) & (original description: Putative HIS2B, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben044scf00046907ctg000_191-2619' '(gnl|cdd|28955 : 175.0) no description available & (o65759|h2ax_cicar : 174.0) Histone H2AX - Cicer arietinum (Chickpea) (Garbanzo) & (gnl|cdd|36967 : 171.0) no description available & (at1g08880 : 167.0) Encodes HTA5, a histone H2A protein. H2AX is a meiosis-specific isoform of histone H2A. Upon DSB formation, rapid accumulation of phosphorylated H2AX (γ-H2AX) occurs around the break site. H2AX foci accumulate in early G2. Immunolocalization studies in spread preparations of wild-type meiocytes at G2/early leptotene revealed the accumulation of numerous rather diffuse γ-H2AX foci throughout the chromatin. However, their accumulation is not contemporaneous with that of AtSPO11-1. At 3 h post-S, no γ-H2AX foci are detected. During the 3- to 5-h window when AtSPO11-1 foci rapidly disappear, there is an equally swift accumulation of γ-H2AX to a maximum of >50 diffuse foci. The level of γH2AX then remains constant for a further 13 h before undergoing a gradual decrease to 10ñ20 foci in the 18- to 24-h post-S period. By 30 h the foci have disappeared from the chromatin.; H2AXA; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: gamma histone variant H2AX (TAIR:AT1G54690.1); Has 3916 Blast hits to 3911 proteins in 363 species: Archae - 0; Bacteria - 0; Metazoa - 2550; Fungi - 318; Plants - 612; Viruses - 4; Other Eukaryotes - 432 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative h2b, Description = Histone H2A, PFAM = PF00125;PF16211)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101ctg16374_1985-5107' '(gnl|cdd|36967 : 175.0) no description available & (gnl|cdd|28955 : 173.0) no description available & (at5g54640 : 140.0) Isolated from T-DNA insertion line, the rat5 mutant is deficient in T-DNA integration. Encodes histone2A protein.; RESISTANT TO AGROBACTERIUM TRANSFORMATION 5 (RAT5); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA mediated transformation, response to bacterium, response to wounding; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 2 (TAIR:AT4G27230.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q84nj4|h2a3_orysa : 135.0) Probable histone H2A.3 - Oryza sativa (Rice) & (reliability: 280.0) & (original description: Putative h2b, Description = Histone H2A, PFAM = PF16211;PF00125)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf00104_293319-305284' '(gnl|cdd|36968 : 191.0) no description available & (q8h7y8|h2av1_orysa : 187.0) Probable histone H2A variant 1 - Oryza sativa (Rice) & (at3g54560 : 185.0) Encodes HTA11, a histone H2A protein.; histone H2A 11 (HTA11); FUNCTIONS IN: DNA binding; INVOLVED IN: flower development, detection of temperature stimulus, defense response to bacterium; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 8 (TAIR:AT2G38810.2); Has 3864 Blast hits to 3859 proteins in 326 species: Archae - 0; Bacteria - 0; Metazoa - 2525; Fungi - 296; Plants - 612; Viruses - 2; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|28955 : 146.0) no description available & (reliability: 370.0) & (original description: Putative H2AV, Description = Histone H2A variant 1, PFAM = PF00125;PF16211)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf00223_422362-425026' '(gnl|cdd|28955 : 168.0) no description available & (gnl|cdd|36967 : 163.0) no description available & (q2hu68|h2a1_medtr : 157.0) Probable histone H2A.1 - Medicago truncatula (Barrel medic) & (at5g02560 : 152.0) Encodes HTA12, a histone H2A protein.; histone H2A 12 (HTA12); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 6 (TAIR:AT5G59870.1). & (reliability: 304.0) & (original description: Putative h2b, Description = Histone H2A, PFAM = PF16211;PF00125)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf00247_325365-327882' '(gnl|cdd|28955 : 170.0) no description available & (gnl|cdd|36967 : 167.0) no description available & (q2qpg9|h2axb_orysa : 141.0) Probable histone H2AXb - Oryza sativa (Rice) & (at1g08880 : 139.0) Encodes HTA5, a histone H2A protein. H2AX is a meiosis-specific isoform of histone H2A. Upon DSB formation, rapid accumulation of phosphorylated H2AX (γ-H2AX) occurs around the break site. H2AX foci accumulate in early G2. Immunolocalization studies in spread preparations of wild-type meiocytes at G2/early leptotene revealed the accumulation of numerous rather diffuse γ-H2AX foci throughout the chromatin. However, their accumulation is not contemporaneous with that of AtSPO11-1. At 3 h post-S, no γ-H2AX foci are detected. During the 3- to 5-h window when AtSPO11-1 foci rapidly disappear, there is an equally swift accumulation of γ-H2AX to a maximum of >50 diffuse foci. The level of γH2AX then remains constant for a further 13 h before undergoing a gradual decrease to 10ñ20 foci in the 18- to 24-h post-S period. By 30 h the foci have disappeared from the chromatin.; H2AXA; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: gamma histone variant H2AX (TAIR:AT1G54690.1); Has 3916 Blast hits to 3911 proteins in 363 species: Archae - 0; Bacteria - 0; Metazoa - 2550; Fungi - 318; Plants - 612; Viruses - 4; Other Eukaryotes - 432 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative h2b, Description = Histone H2A, PFAM = PF16211;PF00125)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf00369_326338-328873' '(gnl|cdd|28955 : 168.0) no description available & (gnl|cdd|36967 : 157.0) no description available & (q2hu65|h2a2_medtr : 143.0) Probable histone H2A.2 - Medicago truncatula (Barrel medic) & (at5g59870 : 139.0) Encodes HTA6, a histone H2A protein.; histone H2A 6 (HTA6); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 12 (TAIR:AT5G02560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative h2afx, Description = Histone H2A, PFAM = PF00125;PF16211)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf00436_1078786-1081226' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 136.0) no description available & (gnl|cdd|47734 : 132.0) no description available & (reliability: 318.0) & (original description: Putative HIS2B, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf00582_201203-204447' '(gnl|cdd|28955 : 169.0) no description available & (gnl|cdd|36967 : 163.0) no description available & (q2hu65|h2a2_medtr : 124.0) Probable histone H2A.2 - Medicago truncatula (Barrel medic) & (at5g02560 : 119.0) Encodes HTA12, a histone H2A protein.; histone H2A 12 (HTA12); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 6 (TAIR:AT5G59870.1). & (reliability: 238.0) & (original description: Putative HTA1, Description = Histone H2AX, PFAM = PF16211;PF00125)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf00858_5014-7540' '(gnl|cdd|36967 : 176.0) no description available & (gnl|cdd|28955 : 174.0) no description available & (at1g51060 : 159.0) Encodes HTA10, a histone H2A protein.; histone H2A 10 (HTA10); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 13 (TAIR:AT3G20670.1); Has 3904 Blast hits to 3899 proteins in 361 species: Archae - 0; Bacteria - 0; Metazoa - 2554; Fungi - 302; Plants - 612; Viruses - 4; Other Eukaryotes - 432 (source: NCBI BLink). & (q43312|h2a7_wheat : 149.0) Protein H2A.7 (wcH2A-4) (wcH2A-10) - Triticum aestivum (Wheat) & (reliability: 318.0) & (original description: Putative h2b, Description = Histone H2A, PFAM = PF16211;PF00125)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf01372_957195-960460' '(gnl|cdd|36967 : 178.0) no description available & (gnl|cdd|28955 : 171.0) no description available & (o65759|h2ax_cicar : 157.0) Histone H2AX - Cicer arietinum (Chickpea) (Garbanzo) & (at1g54690 : 154.0) Encodes HTA3, a histone H2A protein. H2AX is a meiosis-specific isoform of histone H2A. Upon DSB formation, rapid accumulation of phosphorylated H2AX (γ-H2AX) occurs around the break site. H2AX foci accumulate in early G2. Immunolocalization studies in spread preparations of wild-type meiocytes at G2/early leptotene revealed the accumulation of numerous rather diffuse γ-H2AX foci throughout the chromatin. However, their accumulation is not contemporaneous with that of AtSPO11-1. At 3 h post-S, no γ-H2AX foci are detected. During the 3- to 5-h window when AtSPO11-1 foci rapidly disappear, there is an equally swift accumulation of γ-H2AX to a maximum of >50 diffuse foci. The level of γH2AX then remains constant for a further 13 h before undergoing a gradual decrease to 10ñ20 foci in the 18- to 24-h post-S period. By 30 h the foci have disappeared from the chromatin.; gamma histone variant H2AX (GAMMA-H2AX); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT1G08880.1); Has 3932 Blast hits to 3927 proteins in 364 species: Archae - 0; Bacteria - 0; Metazoa - 2549; Fungi - 335; Plants - 612; Viruses - 4; Other Eukaryotes - 432 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative h2b, Description = Histone H2A, PFAM = PF00125;PF16211)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf01464_3859-6296' '(q1su99|h2b3_medtr : 159.0) Probable histone H2B.3 - Medicago truncatula (Barrel medic) & (at5g59910 : 154.0) HTB4; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 137.0) no description available & (gnl|cdd|47734 : 133.0) no description available & (reliability: 306.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf01579_223755-226177' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 137.0) no description available & (gnl|cdd|47734 : 132.0) no description available & (reliability: 318.0) & (original description: Putative HIS2B, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf01866_25751-28393' '(gnl|cdd|28955 : 171.0) no description available & (gnl|cdd|36967 : 165.0) no description available & (q2hu65|h2a2_medtr : 152.0) Probable histone H2A.2 - Medicago truncatula (Barrel medic) & (at5g02560 : 142.0) Encodes HTA12, a histone H2A protein.; histone H2A 12 (HTA12); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 6 (TAIR:AT5G59870.1). & (reliability: 284.0) & (original description: Putative h2b, Description = Histone H2A, PFAM = PF16211;PF00125)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf02182_238538-259425' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 140.0) no description available & (gnl|cdd|47734 : 134.0) no description available & (reliability: 318.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf02182_325394-327834' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 138.0) no description available & (gnl|cdd|47734 : 135.0) no description available & (reliability: 318.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf03277_309905-315000' '(gnl|cdd|28955 : 171.0) no description available & (gnl|cdd|36967 : 160.0) no description available & (q2hu68|h2a1_medtr : 146.0) Probable histone H2A.1 - Medicago truncatula (Barrel medic) & (at5g02560 : 142.0) Encodes HTA12, a histone H2A protein.; histone H2A 12 (HTA12); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 6 (TAIR:AT5G59870.1). & (reliability: 284.0) & (original description: Putative A34, Description = Histone H2A, PFAM = PF00125;PF16211)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf03923_1516850-1521056' '(q84mp7|h2av3_orysa : 188.0) Probable histone H2A variant 3 - Oryza sativa (Rice) & (at2g38810 : 185.0) Encodes HTA8, a histone H2A protein.; histone H2A 8 (HTA8); FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of flower development; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 11 (TAIR:AT3G54560.1); Has 3868 Blast hits to 3863 proteins in 325 species: Archae - 0; Bacteria - 0; Metazoa - 2531; Fungi - 294; Plants - 612; Viruses - 2; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|36968 : 184.0) no description available & (gnl|cdd|28955 : 146.0) no description available & (reliability: 370.0) & (original description: Putative H2AFZ, Description = Histone H2A.Z, PFAM = PF00125;PF16211)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf05506_36613-39056' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 138.0) no description available & (gnl|cdd|47734 : 132.0) no description available & (reliability: 318.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf05962_465504-468909' '(gnl|cdd|36967 : 178.0) no description available & (gnl|cdd|28955 : 172.0) no description available & (o65759|h2ax_cicar : 156.0) Histone H2AX - Cicer arietinum (Chickpea) (Garbanzo) & (at1g54690 : 153.0) Encodes HTA3, a histone H2A protein. H2AX is a meiosis-specific isoform of histone H2A. Upon DSB formation, rapid accumulation of phosphorylated H2AX (γ-H2AX) occurs around the break site. H2AX foci accumulate in early G2. Immunolocalization studies in spread preparations of wild-type meiocytes at G2/early leptotene revealed the accumulation of numerous rather diffuse γ-H2AX foci throughout the chromatin. However, their accumulation is not contemporaneous with that of AtSPO11-1. At 3 h post-S, no γ-H2AX foci are detected. During the 3- to 5-h window when AtSPO11-1 foci rapidly disappear, there is an equally swift accumulation of γ-H2AX to a maximum of >50 diffuse foci. The level of γH2AX then remains constant for a further 13 h before undergoing a gradual decrease to 10ñ20 foci in the 18- to 24-h post-S period. By 30 h the foci have disappeared from the chromatin.; gamma histone variant H2AX (GAMMA-H2AX); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT1G08880.1); Has 3932 Blast hits to 3927 proteins in 364 species: Archae - 0; Bacteria - 0; Metazoa - 2549; Fungi - 335; Plants - 612; Viruses - 4; Other Eukaryotes - 432 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative h2b, Description = Histone H2A, PFAM = PF00125;PF16211)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf06245_249805-252242' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 138.0) no description available & (gnl|cdd|47734 : 134.0) no description available & (reliability: 318.0) & (original description: Putative HIS2B, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf06332_23232-26058' '(gnl|cdd|36967 : 174.0) no description available & (gnl|cdd|28955 : 173.0) no description available & (at3g20670 : 156.0) Encodes HTA13, a histone H2A protein.; histone H2A 13 (HTA13); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 10 (TAIR:AT1G51060.1); Has 3900 Blast hits to 3895 proteins in 360 species: Archae - 0; Bacteria - 0; Metazoa - 2556; Fungi - 297; Plants - 612; Viruses - 4; Other Eukaryotes - 431 (source: NCBI BLink). & (q43312|h2a7_wheat : 149.0) Protein H2A.7 (wcH2A-4) (wcH2A-10) - Triticum aestivum (Wheat) & (reliability: 312.0) & (original description: Putative h2b, Description = Histone H2A, PFAM = PF16211;PF00125)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf07091_258376-261209' '(at1g08170 : 108.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT2G28720.1); Has 3412 Blast hits to 3396 proteins in 350 species: Archae - 0; Bacteria - 51; Metazoa - 2306; Fungi - 230; Plants - 467; Viruses - 0; Other Eukaryotes - 358 (source: NCBI BLink). & (gnl|cdd|36955 : 108.0) no description available & (gnl|cdd|47734 : 107.0) no description available & (p27807|h2b1_wheat : 103.0) Histone H2B.1 - Triticum aestivum (Wheat) & (reliability: 202.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf07152_440726-443160' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 139.0) no description available & (gnl|cdd|47734 : 136.0) no description available & (reliability: 318.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf08328_87347-93006' '(at1g52740 : 190.0) Encodes HTA9, a histone H2A protein.; histone H2A protein 9 (HTA9); FUNCTIONS IN: DNA binding; INVOLVED IN: detection of temperature stimulus, defense response to bacterium, regulation of flower development; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 11 (TAIR:AT3G54560.1); Has 3910 Blast hits to 3905 proteins in 353 species: Archae - 0; Bacteria - 0; Metazoa - 2573; Fungi - 292; Plants - 612; Viruses - 4; Other Eukaryotes - 429 (source: NCBI BLink). & (q84mp7|h2av3_orysa : 186.0) Probable histone H2A variant 3 - Oryza sativa (Rice) & (gnl|cdd|36968 : 186.0) no description available & (gnl|cdd|28955 : 154.0) no description available & (reliability: 380.0) & (original description: Putative h2A, Description = Histone H2A, PFAM = PF16211;PF00125)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf09876_18609-21151' '(gnl|cdd|28955 : 168.0) no description available & (gnl|cdd|36967 : 159.0) no description available & (q2hu68|h2a1_medtr : 141.0) Probable histone H2A.1 - Medicago truncatula (Barrel medic) & (at5g27670 : 137.0) Encodes HTA7, a histone H2A protein.; histone H2A 7 (HTA7); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 6 (TAIR:AT5G59870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative h2b, Description = Histone H2A, PFAM = PF00125;PF16211)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf16416_1-1664' '(o22582|h2b_goshi : 169.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g59910 : 162.0) HTB4; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 140.0) no description available & (gnl|cdd|47734 : 138.0) no description available & (reliability: 312.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'niben101scf22060_41802-44329' '(o65759|h2ax_cicar : 173.0) Histone H2AX - Cicer arietinum (Chickpea) (Garbanzo) & (gnl|cdd|28955 : 173.0) no description available & (gnl|cdd|36967 : 170.0) no description available & (at1g08880 : 166.0) Encodes HTA5, a histone H2A protein. H2AX is a meiosis-specific isoform of histone H2A. Upon DSB formation, rapid accumulation of phosphorylated H2AX (γ-H2AX) occurs around the break site. H2AX foci accumulate in early G2. Immunolocalization studies in spread preparations of wild-type meiocytes at G2/early leptotene revealed the accumulation of numerous rather diffuse γ-H2AX foci throughout the chromatin. However, their accumulation is not contemporaneous with that of AtSPO11-1. At 3 h post-S, no γ-H2AX foci are detected. During the 3- to 5-h window when AtSPO11-1 foci rapidly disappear, there is an equally swift accumulation of γ-H2AX to a maximum of >50 diffuse foci. The level of γH2AX then remains constant for a further 13 h before undergoing a gradual decrease to 10ñ20 foci in the 18- to 24-h post-S period. By 30 h the foci have disappeared from the chromatin.; H2AXA; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: gamma histone variant H2AX (TAIR:AT1G54690.1); Has 3916 Blast hits to 3911 proteins in 363 species: Archae - 0; Bacteria - 0; Metazoa - 2550; Fungi - 318; Plants - 612; Viruses - 4; Other Eukaryotes - 432 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative h2b, Description = Histone H2A, PFAM = PF00125;PF16211)' T '28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'nbv0.3scaffold20138_9241-12077' '(gnl|cdd|36955 : 111.0) no description available & (gnl|cdd|47734 : 108.0) no description available & (at1g08170 : 105.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT2G28720.1); Has 3412 Blast hits to 3396 proteins in 350 species: Archae - 0; Bacteria - 51; Metazoa - 2306; Fungi - 230; Plants - 467; Viruses - 0; Other Eukaryotes - 358 (source: NCBI BLink). & (p27807|h2b1_wheat : 103.0) Histone H2B.1 - Triticum aestivum (Wheat) & (reliability: 210.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'nbv0.3scaffold111879_1-2116' '(o22582|h2b_goshi : 169.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at3g45980 : 164.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases as well as the UBC1 and UBC2 E2 ubiquitin conjugating enzymes. Lysine 146 appears to be the site of the ubiquitin addition.; HTB9; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT1G07790.1); Has 3616 Blast hits to 3469 proteins in 351 species: Archae - 0; Bacteria - 64; Metazoa - 2275; Fungi - 213; Plants - 487; Viruses - 0; Other Eukaryotes - 577 (source: NCBI BLink). & (gnl|cdd|36955 : 139.0) no description available & (gnl|cdd|47734 : 137.0) no description available & (reliability: 324.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'nbv0.5scaffold88_949484-1075258' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 140.0) no description available & (gnl|cdd|47734 : 135.0) no description available & (reliability: 316.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben044scf00000678ctg002_4717-76363' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 138.0) no description available & (gnl|cdd|47734 : 135.0) no description available & (reliability: 316.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben044scf00007991ctg022_5611-7831' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 138.0) no description available & (gnl|cdd|47734 : 133.0) no description available & (reliability: 316.0) & (original description: Putative HIS2B, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben044scf00039215ctg018_7414-9905' '(at1g08170 : 119.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT2G28720.1); Has 3412 Blast hits to 3396 proteins in 350 species: Archae - 0; Bacteria - 51; Metazoa - 2306; Fungi - 230; Plants - 467; Viruses - 0; Other Eukaryotes - 358 (source: NCBI BLink). & (gnl|cdd|36955 : 113.0) no description available & (p54347|h2b4_chlre : 103.0) Histone H2B.4 (H2B-IV) - Chlamydomonas reinhardtii & (gnl|cdd|47734 : 103.0) no description available & (reliability: 238.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben101scf00436_1078786-1081226' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 136.0) no description available & (gnl|cdd|47734 : 132.0) no description available & (reliability: 316.0) & (original description: Putative HIS2B, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben101scf01464_3859-6296' '(q1su99|h2b3_medtr : 159.0) Probable histone H2B.3 - Medicago truncatula (Barrel medic) & (at5g59910 : 154.0) HTB4; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 137.0) no description available & (gnl|cdd|47734 : 133.0) no description available & (reliability: 308.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben101scf01579_223755-226177' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 137.0) no description available & (gnl|cdd|47734 : 132.0) no description available & (reliability: 316.0) & (original description: Putative HIS2B, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben101scf02182_238538-259425' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 140.0) no description available & (gnl|cdd|47734 : 134.0) no description available & (reliability: 316.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben101scf02182_325394-327834' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 138.0) no description available & (gnl|cdd|47734 : 135.0) no description available & (reliability: 316.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben101scf05506_36613-39056' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 138.0) no description available & (gnl|cdd|47734 : 132.0) no description available & (reliability: 316.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben101scf06245_249805-252242' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 138.0) no description available & (gnl|cdd|47734 : 134.0) no description available & (reliability: 316.0) & (original description: Putative HIS2B, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben101scf07091_258376-261209' '(at1g08170 : 108.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT2G28720.1); Has 3412 Blast hits to 3396 proteins in 350 species: Archae - 0; Bacteria - 51; Metazoa - 2306; Fungi - 230; Plants - 467; Viruses - 0; Other Eukaryotes - 358 (source: NCBI BLink). & (gnl|cdd|36955 : 108.0) no description available & (gnl|cdd|47734 : 107.0) no description available & (p27807|h2b1_wheat : 103.0) Histone H2B.1 - Triticum aestivum (Wheat) & (reliability: 216.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben101scf07152_440726-443160' '(o22582|h2b_goshi : 162.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g22880 : 159.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 139.0) no description available & (gnl|cdd|47734 : 136.0) no description available & (reliability: 316.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben101scf08570_422020-436390' '(at1g08170 : 108.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT2G28720.1); Has 3412 Blast hits to 3396 proteins in 350 species: Archae - 0; Bacteria - 51; Metazoa - 2306; Fungi - 230; Plants - 467; Viruses - 0; Other Eukaryotes - 358 (source: NCBI BLink). & (gnl|cdd|36955 : 103.0) no description available & (gnl|cdd|47734 : 98.9) no description available & (o22582|h2b_goshi : 94.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (reliability: 216.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'niben101scf16416_1-1664' '(o22582|h2b_goshi : 169.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (at5g59910 : 162.0) HTB4; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 140.0) no description available & (gnl|cdd|47734 : 138.0) no description available & (reliability: 324.0) & (original description: Putative hh2b, Description = Histone H2B, PFAM = PF00125)' T '28.1.3.2.3' 'DNA.synthesis/chromatin structure.histone.core.H3' 'niben044scf00007322ctg000_133-2576' '(gnl|cdd|36956 : 202.0) no description available & (at4g40030 : 195.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G10980.1); Has 14600 Blast hits to 14592 proteins in 7243 species: Archae - 0; Bacteria - 0; Metazoa - 10603; Fungi - 2037; Plants - 1258; Viruses - 0; Other Eukaryotes - 702 (source: NCBI BLink). & (p68428|h32_wheat : 187.0) Histone H3.2 - Triticum aestivum (Wheat) & (gnl|cdd|47735 : 153.0) no description available & (reliability: 390.0) & (original description: Putative HTR2, Description = Histone H3.2, PFAM = PF00125)' T '28.1.3.2.3' 'DNA.synthesis/chromatin structure.histone.core.H3' 'niben101scf00528_86464-89036' '(gnl|cdd|36956 : 212.0) no description available & (at4g40030 : 205.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G10980.1); Has 14600 Blast hits to 14592 proteins in 7243 species: Archae - 0; Bacteria - 0; Metazoa - 10603; Fungi - 2037; Plants - 1258; Viruses - 0; Other Eukaryotes - 702 (source: NCBI BLink). & (p69248|h32_petcr : 199.0) Histone H3.2 - Petroselinum crispum (Parsley) (Petroselinum hortense) & (gnl|cdd|47735 : 161.0) no description available & (reliability: 410.0) & (original description: Putative h3, Description = Histone H3, PFAM = PF00125)' T '28.1.3.2.3' 'DNA.synthesis/chromatin structure.histone.core.H3' 'niben101scf00528_107304-109803' '(at4g40030 : 108.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G10980.1); Has 14600 Blast hits to 14592 proteins in 7243 species: Archae - 0; Bacteria - 0; Metazoa - 10603; Fungi - 2037; Plants - 1258; Viruses - 0; Other Eukaryotes - 702 (source: NCBI BLink). & (p68428|h32_wheat : 100.0) Histone H3.2 - Triticum aestivum (Wheat) & (gnl|cdd|36956 : 83.0) no description available & (reliability: 216.0) & (original description: Putative H3, Description = Histone H3, PFAM = PF00125)' T '28.1.3.2.3' 'DNA.synthesis/chromatin structure.histone.core.H3' 'niben101scf01094_110332-115260' '(gnl|cdd|36956 : 244.0) no description available & (at5g65360 : 231.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: chloroplast, nucleosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G10400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p69248|h32_petcr : 228.0) Histone H3.2 - Petroselinum crispum (Parsley) (Petroselinum hortense) & (gnl|cdd|47735 : 180.0) no description available & (reliability: 462.0) & (original description: Putative h3, Description = Histone H3, PFAM = PF00125)' T '28.1.3.2.3' 'DNA.synthesis/chromatin structure.histone.core.H3' 'niben101scf01397_85164-87868' '(at4g40030 : 225.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G10980.1); Has 14600 Blast hits to 14592 proteins in 7243 species: Archae - 0; Bacteria - 0; Metazoa - 10603; Fungi - 2037; Plants - 1258; Viruses - 0; Other Eukaryotes - 702 (source: NCBI BLink). & (q71h73|h33_vitvi : 213.0) Histone H3.3 - Vitis vinifera (Grape) & (gnl|cdd|36956 : 198.0) no description available & (gnl|cdd|47735 : 153.0) no description available & (reliability: 450.0) & (original description: Putative HTR4, Description = Histone H3.3, PFAM = PF00125)' T '28.1.3.2.3' 'DNA.synthesis/chromatin structure.histone.core.H3' 'niben101scf09523_173122-175565' '(gnl|cdd|36956 : 201.0) no description available & (at4g40030 : 193.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G10980.1); Has 14600 Blast hits to 14592 proteins in 7243 species: Archae - 0; Bacteria - 0; Metazoa - 10603; Fungi - 2037; Plants - 1258; Viruses - 0; Other Eukaryotes - 702 (source: NCBI BLink). & (p68428|h32_wheat : 186.0) Histone H3.2 - Triticum aestivum (Wheat) & (gnl|cdd|47735 : 153.0) no description available & (reliability: 386.0) & (original description: Putative HTR2, Description = Histone H3.2, PFAM = PF00125)' T '28.1.3.2.4' 'DNA.synthesis/chromatin structure.histone.core.H4' 'nbv0.3scaffold19788_18096-20404' '(at5g59970 : 117.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Histone H4, conserved site (InterPro:IPR019809), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125), Histone H4 (InterPro:IPR001951); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p62788|h4_pea : 117.0) Histone H4 - Pisum sativum (Garden pea) & (gnl|cdd|38677 : 113.0) no description available & (gnl|cdd|28957 : 103.0) no description available & (reliability: 234.0) & (original description: Putative h4, Description = Histone H4, PFAM = PF15511)' T '28.1.3.2.4' 'DNA.synthesis/chromatin structure.histone.core.H4' 'niben101ctg14707_1-1466' '(gnl|cdd|38677 : 148.0) no description available & (at5g59970 : 135.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Histone H4, conserved site (InterPro:IPR019809), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125), Histone H4 (InterPro:IPR001951); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p62788|h4_pea : 135.0) Histone H4 - Pisum sativum (Garden pea) & (gnl|cdd|28957 : 123.0) no description available & (reliability: 270.0) & (original description: Putative h4, Description = Histone H4, PFAM = PF15511)' T '28.1.3.2.4' 'DNA.synthesis/chromatin structure.histone.core.H4' 'niben101scf05373_260117-262425' '(gnl|cdd|38677 : 149.0) no description available & (at5g59970 : 135.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Histone H4, conserved site (InterPro:IPR019809), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125), Histone H4 (InterPro:IPR001951); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p62788|h4_pea : 135.0) Histone H4 - Pisum sativum (Garden pea) & (gnl|cdd|28957 : 122.0) no description available & (reliability: 270.0) & (original description: Putative h4, Description = Histone H4, PFAM = PF15511)' T '28.1.3.2.4' 'DNA.synthesis/chromatin structure.histone.core.H4' 'niben101scf16416_232721-244349' '(gnl|cdd|38677 : 148.0) no description available & (at5g59970 : 134.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Histone H4, conserved site (InterPro:IPR019809), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125), Histone H4 (InterPro:IPR001951); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p62788|h4_pea : 134.0) Histone H4 - Pisum sativum (Garden pea) & (gnl|cdd|28957 : 122.0) no description available & (reliability: 268.0) & (original description: Putative h4, Description = Histone H4, PFAM = PF15511;PF15511)' T '28.1.3.2.4' 'DNA.synthesis/chromatin structure.histone.core.H4' 'niben101scf23814_63707-70755' '(gnl|cdd|38677 : 149.0) no description available & (at5g59970 : 137.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Histone H4, conserved site (InterPro:IPR019809), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125), Histone H4 (InterPro:IPR001951); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p62788|h4_pea : 136.0) Histone H4 - Pisum sativum (Garden pea) & (gnl|cdd|28957 : 123.0) no description available & (reliability: 274.0) & (original description: Putative h4, Description = Histone H4, PFAM = PF15511;PF15511)' T '28.2' 'DNA.repair' 'nbv0.3scaffold1441_66713-78447' '(at3g28030 : 834.0) Required for repair of pyrimidine-pyrimidinone (6-4) dimers.; ULTRAVIOLET HYPERSENSITIVE 3 (UVH3); FUNCTIONS IN: protein binding, nuclease activity; INVOLVED IN: DNA repair, response to UV-B, response to heat, non-photoreactive DNA repair; LOCATED IN: nucleus; EXPRESSED IN: stem, leaf whorl, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: XPG conserved site (InterPro:IPR019974), Xeroderma pigmentosum group G protein (InterPro:IPR001044), XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G01880.1); Has 8115 Blast hits to 5779 proteins in 624 species: Archae - 528; Bacteria - 414; Metazoa - 2441; Fungi - 1496; Plants - 576; Viruses - 71; Other Eukaryotes - 2589 (source: NCBI BLink). & (gnl|cdd|37731 : 258.0) no description available & (gnl|cdd|29030 : 182.0) no description available & (reliability: 1668.0) & (original description: Putative xpg, Description = DNA repair protein complementing XP-G cells, PFAM = PF00867;PF00752)' T '28.2' 'DNA.repair' 'nbv0.3scaffold1788_2766-13847' '(at4g31150 : 219.0) endonuclease V family protein; FUNCTIONS IN: endonuclease activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease V (InterPro:IPR007581); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39618 : 173.0) no description available & (gnl|cdd|68078 : 132.0) no description available & (reliability: 438.0) & (original description: Putative nfi, Description = Endonuclease V, PFAM = PF04493)' T '28.2' 'DNA.repair' 'nbv0.3scaffold2443_44156-46797' '(at3g14890 : 114.0) phosphoesterase; FUNCTIONS IN: DNA binding, catalytic activity, zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIIA (InterPro:IPR006549), Polynucleotide kinase 3 phosphatase, central region (InterPro:IPR013954), Zinc finger, PARP-type (InterPro:IPR001510), Polynucleotide kinase 3, phosphatase (InterPro:IPR015636), DNA 3-phosphatase (InterPro:IPR006551); BEST Arabidopsis thaliana protein match is: poly(ADP-ribose) polymerase 2 (TAIR:AT2G31320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87586 : 99.9) no description available & (reliability: 228.0) & (original description: Putative ZDP, Description = Bifunctional polynucleotide phosphatase/kinase, PFAM = PF08645)' T '28.2' 'DNA.repair' 'nbv0.3scaffold3911_32933-44155' '(at5g04560 : 338.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 99.1) no description available & (reliability: 636.0) & (original description: Putative NtROS3, Description = Repressor of silencing 3, PFAM = PF15628;PF15629)' T '28.2' 'DNA.repair' 'nbv0.3scaffold6460_41832-59657' '(at5g54090 : 688.0) DNA mismatch repair protein MutS, type 2; FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, maintenance of fidelity involved in DNA-dependent DNA replication; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, type 2 (InterPro:IPR005747), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS, core (InterPro:IPR007696); BEST Arabidopsis thaliana protein match is: DNA mismatch repair protein MutS, type 2 (TAIR:AT1G65070.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80654 : 408.0) no description available & (gnl|cdd|35439 : 109.0) no description available & (reliability: 1376.0) & (original description: Putative mutS2, Description = MutS2 protein, PFAM = PF00488)' T '28.2' 'DNA.repair' 'nbv0.3scaffold7871_35093-54617' '(at4g35520 : 399.0) DNA mismatch repair protein similar to MutL. Required for normal levels of meiotic crossovers; MUTL protein homolog 3 (MLH3); FUNCTIONS IN: mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, reciprocal meiotic recombination; LOCATED IN: chromosome; EXPRESSED IN: inflorescence; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein, N-terminal (InterPro:IPR014763), MutL, C-terminal, dimerisation (InterPro:IPR014790), DNA mismatch repair protein (InterPro:IPR002099), DNA mismatch repair, conserved site (InterPro:IPR014762), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: DNA mismatch repair protein, putative (TAIR:AT4G02460.1); Has 8909 Blast hits to 6784 proteins in 2360 species: Archae - 138; Bacteria - 6148; Metazoa - 581; Fungi - 681; Plants - 158; Viruses - 0; Other Eukaryotes - 1203 (source: NCBI BLink). & (gnl|cdd|37188 : 277.0) no description available & (gnl|cdd|30671 : 213.0) no description available & (reliability: 798.0) & (original description: Putative MLH3, Description = DNA mismatch repair protein mutL, PFAM = PF01119;PF13589;PF08676)' T '28.2' 'DNA.repair' 'nbv0.3scaffold8122_11869-19442' '(at3g14890 : 179.0) phosphoesterase; FUNCTIONS IN: DNA binding, catalytic activity, zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIIA (InterPro:IPR006549), Polynucleotide kinase 3 phosphatase, central region (InterPro:IPR013954), Zinc finger, PARP-type (InterPro:IPR001510), Polynucleotide kinase 3, phosphatase (InterPro:IPR015636), DNA 3-phosphatase (InterPro:IPR006551); BEST Arabidopsis thaliana protein match is: poly(ADP-ribose) polymerase 2 (TAIR:AT2G31320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative ZDP, Description = Bifunctional polynucleotide, PFAM = PF00645)' T '28.2' 'DNA.repair' 'nbv0.3scaffold8480_38353-53233' '(at5g64520 : 244.0) Encodes a protein of the XRCC2 family involved in DNA repair. atxrcc2-1 Mutants are sensitive to MitomycinC but do not show fertility defects.; homolog of X-ray repair cross complementing 2 (XRCC2) (XRCC2); Has 186 Blast hits to 186 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 44; Plants - 31; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|38070 : 203.0) no description available & (reliability: 488.0) & (original description: Putative XRCC2, Description = DNA repair protein XRCC2 homolog, PFAM = )' T '28.2' 'DNA.repair' 'nbv0.3scaffold10705_6540-13428' '(at1g79650 : 439.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23B (RAD23B); FUNCTIONS IN: damaged DNA binding, ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, base-excision repair, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT1G16190.1). & (gnl|cdd|35235 : 371.0) no description available & (q40742|rad23_orysa : 300.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (gnl|cdd|29207 : 102.0) no description available & (reliability: 878.0) & (original description: Putative HR23, Description = Putative DNA repair protein RAD23-1, PFAM = PF00627;PF00627;PF09280;PF00240)' T '28.2' 'DNA.repair' 'nbv0.3scaffold11029_13501-26692' '(at1g19485 : 570.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: A.T hook-like (InterPro:IPR020478), AT hook, DNA-binding motif (InterPro:IPR017956), WD40 repeat (InterPro:IPR001680), HMG-I/HMG-Y, DNA-binding, conserved site (InterPro:IPR000637), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781). & (reliability: 1140.0) & (original description: Putative BnaC08g18840D, Description = BnaC08g18840D protein, PFAM = )' T '28.2' 'DNA.repair' 'nbv0.3scaffold12008_2699-18966' '(at2g24420 : 325.0) DNA repair ATPase-related; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT4G31340.1); Has 49908 Blast hits to 28607 proteins in 1979 species: Archae - 936; Bacteria - 7564; Metazoa - 22725; Fungi - 3757; Plants - 2190; Viruses - 187; Other Eukaryotes - 12549 (source: NCBI BLink). & (reliability: 650.0) & (original description: Putative PGSC0003DMG400014854, Description = DNA repair ATPase-related family protein, PFAM = )' T '28.2' 'DNA.repair' 'nbv0.3scaffold12551_1008-20813' '(at3g24320 : 1431.0) Promotes re-arrangements of mitochondrial genome. Mutations affects mitochondrial gene expression, and impairs mitochondrial function. Dual targeting of the protein to mitochondria and chloroplasts caused by alternative translation initiation.; MUTL protein homolog 1 (MSH1); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, catalytic activity, ATP binding, nuclease activity; INVOLVED IN: mismatch repair, mitochondrial genome maintenance, mitochondrial DNA metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), Excinuclease ABC, C subunit, N-terminal (InterPro:IPR000305), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695); BEST Arabidopsis thaliana protein match is: MUTS homolog 6 (TAIR:AT4G02070.2); Has 14048 Blast hits to 12806 proteins in 2713 species: Archae - 218; Bacteria - 10179; Metazoa - 621; Fungi - 751; Plants - 393; Viruses - 3; Other Eukaryotes - 1883 (source: NCBI BLink). & (gnl|cdd|35438 : 594.0) no description available & (gnl|cdd|73002 : 211.0) no description available & (reliability: 2862.0) & (original description: Putative MSH1, Description = DNA mismatch repair protein MSH1, mitochondrial, PFAM = PF00488;PF01624)' T '28.2' 'DNA.repair' 'nbv0.3scaffold13883_31234-40750' '(at3g20475 : 340.0) Encodes MSH5, a homologue of the MutS-homolog family of genes required for normal levels of recombination in budding yeast, mouse and Caenorhabditis elegans. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers. Transcripts of AtMSH5 are specific to reproductive tissues and expression of the protein is abundant during prophase I of meiosis. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers.; MUTS-homologue 5 (MSH5); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, chiasma assembly, reciprocal meiotic recombination; LOCATED IN: condensed nuclear chromosome; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, IL.00 inflorescence just visible; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432); BEST Arabidopsis thaliana protein match is: MUTS homolog 2 (TAIR:AT3G18524.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35442 : 231.0) no description available & (gnl|cdd|73040 : 220.0) no description available & (reliability: 680.0) & (original description: Putative msh5, Description = DNA mismatch repair protein MSH5, PFAM = PF00488)' T '28.2' 'DNA.repair' 'nbv0.3scaffold14321_8897-18716' '(at2g28560 : 461.0) Encodes a protein of the RAD51B family involved in double stranded DNA repair. Homozygous mutant plants show increased sensitivity to mitomycin which induces DS breaks.; RAD51B; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis thaliana protein match is: homolog of RAD51 D (TAIR:AT1G07745.2); Has 2570 Blast hits to 2570 proteins in 515 species: Archae - 541; Bacteria - 205; Metazoa - 686; Fungi - 429; Plants - 272; Viruses - 16; Other Eukaryotes - 421 (source: NCBI BLink). & (gnl|cdd|29989 : 165.0) no description available & (gnl|cdd|36646 : 164.0) no description available & (reliability: 922.0) & (original description: Putative RAD51B, Description = DNA repair protein RAD51 homolog 2, PFAM = PF08423)' T '28.2' 'DNA.repair' 'nbv0.3scaffold18186_13907-27820' '(at1g07745 : 317.0) Is a suppressor of SNI1. Encodes a member of the RecA/RAD51 family of DNA recombination and repair proteins. Both RAD51 and SNI1 have a dual role in pathogen-related gene transcription and somatic homologous recombination.; homolog of RAD51 D (RAD51D); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: DNA repair, somatic cell DNA recombination, regulation of response to biotic stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell, male gametophyte, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis thaliana protein match is: DNA repair (Rad51) family protein (TAIR:AT2G28560.1); Has 4124 Blast hits to 4124 proteins in 1258 species: Archae - 446; Bacteria - 1629; Metazoa - 719; Fungi - 404; Plants - 385; Viruses - 2; Other Eukaryotes - 539 (source: NCBI BLink). & (gnl|cdd|29989 : 113.0) no description available & (gnl|cdd|36646 : 92.0) no description available & (reliability: 634.0) & (original description: Putative RAD51D, Description = DNA repair protein RAD51 homolog 4, PFAM = PF08423)' T '28.2' 'DNA.repair' 'nbv0.3scaffold19169_2361-13156' '(at2g28560 : 429.0) Encodes a protein of the RAD51B family involved in double stranded DNA repair. Homozygous mutant plants show increased sensitivity to mitomycin which induces DS breaks.; RAD51B; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis thaliana protein match is: homolog of RAD51 D (TAIR:AT1G07745.2); Has 2570 Blast hits to 2570 proteins in 515 species: Archae - 541; Bacteria - 205; Metazoa - 686; Fungi - 429; Plants - 272; Viruses - 16; Other Eukaryotes - 421 (source: NCBI BLink). & (gnl|cdd|29989 : 158.0) no description available & (gnl|cdd|36646 : 148.0) no description available & (reliability: 858.0) & (original description: Putative RAD51B, Description = AtRAD51B, PFAM = PF08423)' T '28.2' 'DNA.repair' 'nbv0.3scaffold21123_1-13924' '(at5g04560 : 694.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 96.0) no description available & (reliability: 1374.0) & (original description: Putative DME2, Description = DNA demethylase, PFAM = PF15628;PF15629)' T '28.2' 'DNA.repair' 'nbv0.3scaffold23547_13560-17782' '(at5g41370 : 1147.0) Encodes XPB1, a DNA repair protein and transcription factor. Arabidopsis thaliana has duplicated XPB gene (AtXPB1 and AtXPB2, with high similarity to each other). XPB proteins are involved in both DNA repair and transcription, they are component of the transcription factor IIH (TFIIH) and are responsible for DNA helicase activity during nucleotide (nt) excision repair (NER). Complementation assays in yeast rad25 mutant strains suggest the involvement of AtXPB2 in DNA repair. Although both genes are expressed in a constitutive manner during the plant life cycle, Northern blot analyses suggest that light modulates the expression level of both XPB copies.; homolog of xeroderma pigmentosum complementation group B 1 (XPB1); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to UV, response to toxin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: whole plant, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001), Xeroderma pigmentosum group B protein (XP-B) (InterPro:IPR001161), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: homolog of Xeroderma pigmentosum complementation group B 2 (TAIR:AT5G41360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36339 : 1051.0) no description available & (gnl|cdd|31261 : 265.0) no description available & (reliability: 2294.0) & (original description: Putative XPB1, Description = DNA repair helicase XPB1, PFAM = PF13625;PF16203;PF04851)' T '28.2' 'DNA.repair' 'nbv0.3scaffold28418_3463-14364' '(at2g24420 : 379.0) DNA repair ATPase-related; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT4G31340.1); Has 49908 Blast hits to 28607 proteins in 1979 species: Archae - 936; Bacteria - 7564; Metazoa - 22725; Fungi - 3757; Plants - 2190; Viruses - 187; Other Eukaryotes - 12549 (source: NCBI BLink). & (reliability: 758.0) & (original description: Putative At4g31340, Description = AT4G31340 protein, PFAM = )' T '28.2' 'DNA.repair' 'nbv0.3scaffold30153_6480-21567' '(at5g50340 : 629.0) ATP-dependent peptidases;nucleotide binding;serine-type endopeptidases;DNA helicases;ATP binding;damaged DNA binding;nucleoside-triphosphatases; FUNCTIONS IN: in 7 functions; INVOLVED IN: DNA repair, proteolysis, DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, Lon C-terminal (InterPro:IPR008269), ATPase, AAA+ type, core (InterPro:IPR003593), DNA repair protein RadA (InterPro:IPR004504), DNA helicase, DnaB-like, C-terminal (InterPro:IPR007694), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); Has 8098 Blast hits to 8084 proteins in 2420 species: Archae - 172; Bacteria - 6133; Metazoa - 8; Fungi - 0; Plants - 82; Viruses - 9; Other Eukaryotes - 1694 (source: NCBI BLink). & (gnl|cdd|83993 : 520.0) no description available & (reliability: 1258.0) & (original description: Putative sms, Description = DNA repair protein RadA, PFAM = PF13541;PF13481)' T '28.2' 'DNA.repair' 'nbv0.3scaffold31287_7920-12941' '(at1g79650 : 423.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23B (RAD23B); FUNCTIONS IN: damaged DNA binding, ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, base-excision repair, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT1G16190.1). & (gnl|cdd|35235 : 372.0) no description available & (q40742|rad23_orysa : 289.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (gnl|cdd|29207 : 107.0) no description available & (reliability: 846.0) & (original description: Putative HR23, Description = Putative DNA repair protein RAD23-1, PFAM = PF00627;PF00627;PF09280;PF00240)' T '28.2' 'DNA.repair' 'nbv0.3scaffold42920_1926-18083' '(at3g24495 : 1188.0) encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH7 exhibit moderate affinity for a (T/G) substrate and weak binding of (+T), suggesting MSH2*MSH7 may be specialized for lesions/base mispairs not tested or for (T/G) mispairs in special contexts.; MUTS homolog 7 (MSH7); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-homologue MSH6 (InterPro:IPR015536), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695); BEST Arabidopsis thaliana protein match is: MUTS homolog 6 (TAIR:AT4G02070.2); Has 17871 Blast hits to 13835 proteins in 2667 species: Archae - 197; Bacteria - 11731; Metazoa - 1028; Fungi - 1274; Plants - 566; Viruses - 3; Other Eukaryotes - 3072 (source: NCBI BLink). & (gnl|cdd|81564 : 417.0) no description available & (gnl|cdd|35438 : 290.0) no description available & (q9xgc9|msh2_maize : 163.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 2376.0) & (original description: Putative MSH7, Description = DNA mismatch repair protein MSH7, PFAM = PF01624;PF05192;PF00488)' T '28.2' 'DNA.repair' 'nbv0.3scaffold42920_6709-13220' '(at3g24495 : 386.0) encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH7 exhibit moderate affinity for a (T/G) substrate and weak binding of (+T), suggesting MSH2*MSH7 may be specialized for lesions/base mispairs not tested or for (T/G) mispairs in special contexts.; MUTS homolog 7 (MSH7); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-homologue MSH6 (InterPro:IPR015536), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695); BEST Arabidopsis thaliana protein match is: MUTS homolog 6 (TAIR:AT4G02070.2); Has 17871 Blast hits to 13835 proteins in 2667 species: Archae - 197; Bacteria - 11731; Metazoa - 1028; Fungi - 1274; Plants - 566; Viruses - 3; Other Eukaryotes - 3072 (source: NCBI BLink). & (gnl|cdd|35438 : 124.0) no description available & (gnl|cdd|30598 : 92.3) no description available & (reliability: 772.0) & (original description: Putative mus2, Description = DNA mismatch repair protein Msh6-2, PFAM = PF01624;PF05188)' T '28.2' 'DNA.repair' 'nbv0.3scaffold43919_7190-17357' '(at5g54260 : 956.0) DNA repair and meiotic recombination protein, component of MRE11 complex with RAD50 and NBS1; MEIOTIC RECOMBINATION 11 (MRE11); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, exonuclease activity, endonuclease activity; INVOLVED IN: double-strand break repair, DNA metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), DNA repair exonuclease (InterPro:IPR003701), Mre11, DNA-binding (InterPro:IPR007281); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37521 : 693.0) no description available & (gnl|cdd|67753 : 232.0) no description available & (reliability: 1912.0) & (original description: Putative MRE11, Description = Double-strand break repair protein MRE11, PFAM = PF04152;PF00149)' T '28.2' 'DNA.repair' 'nbv0.3scaffold43929_14225-17079' '(gnl|cdd|37207 : 185.0) no description available & (at1g30480 : 179.0) recombination and DNA-damage resistance protein (DRT111); DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 111 (DRT111); FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: DNA repair; LOCATED IN: chloroplast, nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), D111/G-patch (InterPro:IPR000467), Splicing factor, SPF45 (InterPro:IPR016967); Has 6802 Blast hits to 5609 proteins in 466 species: Archae - 14; Bacteria - 357; Metazoa - 3361; Fungi - 1024; Plants - 621; Viruses - 38; Other Eukaryotes - 1387 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative RSN2, Description = DNA-damage-repair/toleration protein DRT111, PFAM = PF01585)' T '28.2' 'DNA.repair' 'nbv0.3scaffold53212_1-14043' '(at5g48120 : 721.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 594 Blast hits to 356 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 233; Plants - 48; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|37178 : 400.0) no description available & (reliability: 1442.0) & (original description: Putative KK1_000447, Description = MMS19 nucleotide excision repair protein isogeny, PFAM = PF12460;PF14500)' T '28.2' 'DNA.repair' 'nbv0.3scaffold53212_751-9169' '(at5g48120 : 329.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 594 Blast hits to 356 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 233; Plants - 48; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|37178 : 201.0) no description available & (reliability: 658.0) & (original description: Putative MET18, Description = MMS19 nucleotide excision repair protein isogeny, PFAM = PF14500)' T '28.2' 'DNA.repair' 'nbv0.3scaffold61458_3068-10752' '(at1g16970 : 170.0) Ku80 and ku70 form the heterodimer complex Ku, required for proper maintenance of the telomeric C strand. Ku regulates the extension of the telomeric G strand. Interacts with WEX, and this interaction stimulates the WEX exonuclease activity.; KU70 homolog (KU70); FUNCTIONS IN: double-stranded DNA binding, protein binding; INVOLVED IN: DNA repair, response to heat, telomere maintenance; LOCATED IN: nucleus, DNA-dependent protein kinase-DNA ligase 4 complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ku70/Ku80, N-terminal alpha/beta (InterPro:IPR005161), DNA-binding SAP (InterPro:IPR003034), DNA helicase, ATP-dependent, Ku type (InterPro:IPR006164), Spen Paralogue and Orthologue SPOC, C-terminal-like (InterPro:IPR016194), Ku70/Ku80 C-terminal arm (InterPro:IPR005160), DNA helicase, ATP-dependent, Ku70 subunit (InterPro:IPR006165); Has 475 Blast hits to 466 proteins in 181 species: Archae - 0; Bacteria - 6; Metazoa - 182; Fungi - 177; Plants - 52; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative KU70, Description = ATP-dependent DNA helicase 2 subunit KU70, PFAM = PF03731)' T '28.2' 'DNA.repair' 'nbv0.3scaffold72288_861-8662' '(at4g02460 : 432.0) Encodes a protein similar to PMS1 in yeast, a member of the family of eukaryotic MutL homologs. The protein appears to play a role in DNA mismatch repair and in the suppression of somatic homeologous recombination.; POSTMEIOTIC SEGREGATION 1 (PMS1); FUNCTIONS IN: mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, fruit development, seed development, DNA recombination, pollen development; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair, conserved site (InterPro:IPR014762), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA mismatch repair protein, C-terminal (InterPro:IPR013507), MutL, C-terminal, dimerisation (InterPro:IPR014790), DNA mismatch repair protein, N-terminal (InterPro:IPR014763), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA mismatch repair protein (InterPro:IPR002099), Post Meiotic Segregation 2 (InterPro:IPR015434), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: MUTL-homologue 1 (TAIR:AT4G09140.1); Has 10471 Blast hits to 7086 proteins in 2377 species: Archae - 138; Bacteria - 7516; Metazoa - 568; Fungi - 666; Plants - 148; Viruses - 0; Other Eukaryotes - 1435 (source: NCBI BLink). & (gnl|cdd|37189 : 285.0) no description available & (gnl|cdd|30671 : 207.0) no description available & (reliability: 864.0) & (original description: Putative pms2, Description = Mismatch repair endonuclease PMS2, PFAM = PF01119;PF13589)' T '28.2' 'DNA.repair' 'nbv0.3scaffold89668_2482-5491' '(at5g44680 : 370.0) DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT3G12710.1); Has 3656 Blast hits to 3656 proteins in 1559 species: Archae - 10; Bacteria - 3140; Metazoa - 4; Fungi - 4; Plants - 168; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (gnl|cdd|86301 : 232.0) no description available & (reliability: 740.0) & (original description: Putative tag, Description = 3-methyladenine-DNA glycosylase I, PFAM = PF03352)' T '28.2' 'DNA.repair' 'nbv0.5scaffold206_946400-974087' '(at1g79650 : 169.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23B (RAD23B); FUNCTIONS IN: damaged DNA binding, ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, base-excision repair, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT1G16190.1). & (gnl|cdd|35235 : 169.0) no description available & (q40742|rad23_orysa : 106.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (gnl|cdd|29207 : 99.5) no description available & (reliability: 338.0) & (original description: Putative RAD23, Description = Putative DNA repair protein RAD23-1, PFAM = PF00627;PF00240)' T '28.2' 'DNA.repair' 'nbv0.5scaffold584_211646-238605' '(at5g04130 : 649.0) DNA GYRASE B2; FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, ATP binding; INVOLVED IN: DNA topological change, DNA metabolic process; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA topoisomerase, type IIA, subunit B, domain 2 (InterPro:IPR013506), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA topoisomerase, type IIA, subunit B (InterPro:IPR000565), DNA topoisomerase, type IIA, subunit B/N-terminal (InterPro:IPR001241); BEST Arabidopsis thaliana protein match is: DNA GYRASE B1 (TAIR:AT3G10270.1); Has 25944 Blast hits to 25881 proteins in 6578 species: Archae - 105; Bacteria - 19082; Metazoa - 171; Fungi - 228; Plants - 112; Viruses - 77; Other Eukaryotes - 6169 (source: NCBI BLink). & (q5nbj3|gyrb_orysa : 615.0) DNA gyrase subunit B, chloroplast/mitochondrial precursor (EC 5.99.1.3) - Oryza sativa (Rice) & (gnl|cdd|81676 : 606.0) no description available & (gnl|cdd|35576 : 360.0) no description available & (reliability: 1270.0) & (original description: Putative gyrB, Description = DNA gyrase subunit B, PFAM = PF00204;PF02518)' T '28.2' 'DNA.repair' 'nbv0.5scaffold733_386890-396709' '(at2g28560 : 485.0) Encodes a protein of the RAD51B family involved in double stranded DNA repair. Homozygous mutant plants show increased sensitivity to mitomycin which induces DS breaks.; RAD51B; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis thaliana protein match is: homolog of RAD51 D (TAIR:AT1G07745.2); Has 2570 Blast hits to 2570 proteins in 515 species: Archae - 541; Bacteria - 205; Metazoa - 686; Fungi - 429; Plants - 272; Viruses - 16; Other Eukaryotes - 421 (source: NCBI BLink). & (gnl|cdd|29989 : 168.0) no description available & (gnl|cdd|36646 : 165.0) no description available & (reliability: 970.0) & (original description: Putative RAD51B, Description = DNA repair protein RAD51 homolog 2, PFAM = PF08423)' T '28.2' 'DNA.repair' 'nbv0.5scaffold1476_397249-414700' '(at5g44740 : 558.0) Y-family DNA polymerase. Catalyses translesion synthesis in response to UV damage. Functionally interacts with PCNA2. Has a ubiquitin binding motif.; Y-family DNA polymerase H (POLH); CONTAINS InterPro DOMAIN/s: DNA polymerase eta (InterPro:IPR017061), DNA-repair protein, UmuC-like (InterPro:IPR001126), DNA-repair protein, UmuC-like, N-terminal (InterPro:IPR017963); BEST Arabidopsis thaliana protein match is: DNA-directed DNA polymerases (TAIR:AT5G44750.1); Has 8088 Blast hits to 8015 proteins in 2292 species: Archae - 210; Bacteria - 5635; Metazoa - 500; Fungi - 401; Plants - 163; Viruses - 3; Other Eukaryotes - 1176 (source: NCBI BLink). & (gnl|cdd|37306 : 408.0) no description available & (gnl|cdd|73283 : 302.0) no description available & (reliability: 1116.0) & (original description: Putative POLH, Description = DNA polymerase eta, PFAM = PF00817;PF11799)' T '28.2' 'DNA.repair' 'nbv0.5scaffold1657_22557-46026' '(at5g48120 : 732.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 594 Blast hits to 356 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 233; Plants - 48; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|37178 : 422.0) no description available & (reliability: 1464.0) & (original description: Putative KK1_000447, Description = MMS19 nucleotide excision repair protein isogeny, PFAM = PF12460;PF14500)' T '28.2' 'DNA.repair' 'nbv0.5scaffold1746_57779-69039' '(at1g49980 : 744.0) DNA/RNA polymerases superfamily protein; FUNCTIONS IN: damaged DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA repair; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, Y-family, little finger domain (InterPro:IPR017961), DNA-repair protein, UmuC-like (InterPro:IPR001126), DNA-repair protein, UmuC-like, N-terminal (InterPro:IPR017963); BEST Arabidopsis thaliana protein match is: DNA-directed DNA polymerases (TAIR:AT5G44750.1); Has 10430 Blast hits to 10220 proteins in 2419 species: Archae - 210; Bacteria - 6752; Metazoa - 626; Fungi - 433; Plants - 141; Viruses - 0; Other Eukaryotes - 2268 (source: NCBI BLink). & (gnl|cdd|37305 : 575.0) no description available & (gnl|cdd|48491 : 365.0) no description available & (reliability: 1488.0) & (original description: Putative POLK, Description = DNA-directed polymerase kappa, PFAM = PF11799;PF00817;PF11798)' T '28.2' 'DNA.repair' 'nbv0.5scaffold2321_142570-169235' '(at3g14890 : 378.0) phosphoesterase; FUNCTIONS IN: DNA binding, catalytic activity, zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIIA (InterPro:IPR006549), Polynucleotide kinase 3 phosphatase, central region (InterPro:IPR013954), Zinc finger, PARP-type (InterPro:IPR001510), Polynucleotide kinase 3, phosphatase (InterPro:IPR015636), DNA 3-phosphatase (InterPro:IPR006551); BEST Arabidopsis thaliana protein match is: poly(ADP-ribose) polymerase 2 (TAIR:AT2G31320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87586 : 180.0) no description available & (gnl|cdd|37345 : 124.0) no description available & (reliability: 756.0) & (original description: Putative Os01g0737300, Description = Os01g0737300 protein, PFAM = PF08645;PF00645)' T '28.2' 'DNA.repair' 'nbv0.5scaffold2971_223372-231012' '(at1g52500 : 376.0) Encodes one of the splice variants of Arabidopsis thaliana MutM homolog. Encodes a formamidopyrimidine-DNA glycosylase that has abasic lyase activity and is able to nick double- stranded oligonucleotides containing 8-oxo-7,8-dihydroguanine (8-oxoG) in vitro.; MUTM homolog-1 (MMH-1); CONTAINS InterPro DOMAIN/s: Ribosomal protein S13-like, H2TH (InterPro:IPR010979), DNA glycosylase/AP lyase, H2TH DNA-binding (InterPro:IPR015886), DNA glycosylase/AP lyase, catalytic domain (InterPro:IPR012319), DNA glycosylase/AP lyase (InterPro:IPR000191); Has 11102 Blast hits to 10156 proteins in 2240 species: Archae - 10; Bacteria - 5065; Metazoa - 1812; Fungi - 570; Plants - 321; Viruses - 42; Other Eukaryotes - 3282 (source: NCBI BLink). & (gnl|cdd|80823 : 172.0) no description available & (reliability: 752.0) & (original description: Putative FPG1, Description = Formamidopyrimidine-DNA glycosylase, PFAM = PF06831;PF01149)' T '28.2' 'DNA.repair' 'nbv0.5scaffold2976_768-12499' '(at1g52500 : 408.0) Encodes one of the splice variants of Arabidopsis thaliana MutM homolog. Encodes a formamidopyrimidine-DNA glycosylase that has abasic lyase activity and is able to nick double- stranded oligonucleotides containing 8-oxo-7,8-dihydroguanine (8-oxoG) in vitro.; MUTM homolog-1 (MMH-1); CONTAINS InterPro DOMAIN/s: Ribosomal protein S13-like, H2TH (InterPro:IPR010979), DNA glycosylase/AP lyase, H2TH DNA-binding (InterPro:IPR015886), DNA glycosylase/AP lyase, catalytic domain (InterPro:IPR012319), DNA glycosylase/AP lyase (InterPro:IPR000191); Has 11102 Blast hits to 10156 proteins in 2240 species: Archae - 10; Bacteria - 5065; Metazoa - 1812; Fungi - 570; Plants - 321; Viruses - 42; Other Eukaryotes - 3282 (source: NCBI BLink). & (gnl|cdd|80823 : 181.0) no description available & (reliability: 816.0) & (original description: Putative Os06g0643600, Description = Os06g0643600 protein, PFAM = PF06831;PF01149)' T '28.2' 'DNA.repair' 'nbv0.5scaffold2988_157306-190253' '(at1g01490 : 89.4) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G63950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative At1g01490, Description = Heavy metal-associated domain containing protein, expressed, PFAM = PF00403)' T '28.2' 'DNA.repair' 'nbv0.5scaffold3533_107861-122932' '(at4g02460 : 877.0) Encodes a protein similar to PMS1 in yeast, a member of the family of eukaryotic MutL homologs. The protein appears to play a role in DNA mismatch repair and in the suppression of somatic homeologous recombination.; POSTMEIOTIC SEGREGATION 1 (PMS1); FUNCTIONS IN: mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, fruit development, seed development, DNA recombination, pollen development; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair, conserved site (InterPro:IPR014762), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA mismatch repair protein, C-terminal (InterPro:IPR013507), MutL, C-terminal, dimerisation (InterPro:IPR014790), DNA mismatch repair protein, N-terminal (InterPro:IPR014763), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA mismatch repair protein (InterPro:IPR002099), Post Meiotic Segregation 2 (InterPro:IPR015434), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: MUTL-homologue 1 (TAIR:AT4G09140.1); Has 10471 Blast hits to 7086 proteins in 2377 species: Archae - 138; Bacteria - 7516; Metazoa - 568; Fungi - 666; Plants - 148; Viruses - 0; Other Eukaryotes - 1435 (source: NCBI BLink). & (gnl|cdd|37189 : 360.0) no description available & (gnl|cdd|30671 : 281.0) no description available & (reliability: 1754.0) & (original description: Putative PMS1, Description = DNA mismatch repair protein PMS1, PFAM = PF13589;PF01119;PF08676)' T '28.2' 'DNA.repair' 'nbv0.5scaffold3655_184760-200239' '(at5g64520 : 240.0) Encodes a protein of the XRCC2 family involved in DNA repair. atxrcc2-1 Mutants are sensitive to MitomycinC but do not show fertility defects.; homolog of X-ray repair cross complementing 2 (XRCC2) (XRCC2); Has 186 Blast hits to 186 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 44; Plants - 31; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|38070 : 201.0) no description available & (reliability: 480.0) & (original description: Putative XRCC2, Description = DNA repair protein XRCC2 homolog, PFAM = )' T '28.2' 'DNA.repair' 'nbv0.5scaffold5110_32947-44169' '(at5g04560 : 337.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|28938 : 80.7) no description available & (reliability: 636.0) & (original description: Putative pg3, Description = Protein ROS1, PFAM = PF15628;PF15629)' T '28.2' 'DNA.repair' 'nbv0.5scaffold5110_34412-83617' '(at2g36490 : 302.0) A repressor of transcriptional gene silencing. Functions by demethylating the target promoter DNA. Interacts physically with RPA2/ROR1. In the ros1 mutants, an increase in methylation is observed in a number of gene promoters. Among the loci affected by ros1, a few (RD29A and At1g76930) are affected in cytosine methylation in all sequence contexts (CpG, CpNpG or CpNpN), although many others are affected primarily in non-CpG contexts.; demeter-like 1 (DML1); FUNCTIONS IN: protein binding, DNA N-glycosylase activity, DNA-(apurinic or apyrimidinic site) lyase activity; INVOLVED IN: DNA repair, chromatin silencing, negative regulation of chromatin silencing, DNA methylation, DNA demethylation; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: HhH-GPD base excision DNA repair family protein (TAIR:AT5G04560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30526 : 99.5) no description available & (reliability: 604.0) & (original description: Putative Dem1, Description = DNA demethylase 1, PFAM = )' T '28.2' 'DNA.repair' 'nbv0.5scaffold6102_106408-117520' '(at5g04560 : 328.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 99.5) no description available & (reliability: 620.0) & (original description: Putative NtROS3, Description = Repressor of silencing 3, PFAM = PF15629;PF15628)' T '28.2' 'DNA.repair' 'nbv0.5scaffold6195_25615-38800' '(at1g19485 : 489.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: A.T hook-like (InterPro:IPR020478), AT hook, DNA-binding motif (InterPro:IPR017956), WD40 repeat (InterPro:IPR001680), HMG-I/HMG-Y, DNA-binding, conserved site (InterPro:IPR000637), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781). & (reliability: 978.0) & (original description: Putative PGSC0003DMG400008959, Description = Putative general transcription factor 3C polypeptide 2-like, PFAM = )' T '28.2' 'DNA.repair' 'nbv0.5scaffold7738_22027-28281' '(at2g31970 : 549.0) Encodes the Arabidopsis RAD50 homologue. It is involved in double strand break repair. Component of the meiotic recombination complex that processes meiotic double-strand-breaks to produce single-stranded DNA ends, which act in the homology search and recombination. Accumulates in the nucleus during meiotic prophase, a process regulated by PHS1.; RAD50; FUNCTIONS IN: zinc ion binding, ATP binding, nuclease activity; INVOLVED IN: DNA repair, double-strand break repair, telomere capping, mitotic recombination, telomere maintenance; LOCATED IN: nucleus, Mre11 complex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc hook, Rad50 (InterPro:IPR013134), Rad50 zinc hook (InterPro:IPR007517), Recombination/repair protein Rad50 (InterPro:IPR004584); Has 105617 Blast hits to 56308 proteins in 2913 species: Archae - 1820; Bacteria - 19240; Metazoa - 45759; Fungi - 8381; Plants - 4805; Viruses - 470; Other Eukaryotes - 25142 (source: NCBI BLink). & (gnl|cdd|36180 : 365.0) no description available & (gnl|cdd|72999 : 127.0) no description available & (reliability: 1098.0) & (original description: Putative RAD50, Description = RAD50, PFAM = )' T '28.2' 'DNA.repair' 'nbv0.5scaffold8939_14604-18504' '(at5g44680 : 317.0) DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT3G12710.1); Has 3656 Blast hits to 3656 proteins in 1559 species: Archae - 10; Bacteria - 3140; Metazoa - 4; Fungi - 4; Plants - 168; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (gnl|cdd|86301 : 188.0) no description available & (reliability: 634.0) & (original description: Putative BnaC06g35890D, Description = BnaC06g35890D protein, PFAM = PF03352)' T '28.2' 'DNA.repair' 'niben044scf00000445ctg002_11015-23436' '(at5g16630 : 714.0) RAD4; FUNCTIONS IN: damaged DNA binding; INVOLVED IN: nucleotide-excision repair; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transglutaminase-like (InterPro:IPR002931), DNA repair protein Rad4, DNA-binding domain 1 (InterPro:IPR018326), DNA repair protein Rad4, DNA-binding domain 3 (InterPro:IPR018328), DNA repair protein Rad4, DNA-binding domain 2 (InterPro:IPR018327), DNA repair protein Rad4, transglutaminase-like domain (InterPro:IPR018325), DNA repair protein Rad4 (InterPro:IPR004583); Has 662 Blast hits to 576 proteins in 184 species: Archae - 0; Bacteria - 0; Metazoa - 224; Fungi - 265; Plants - 79; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|37390 : 351.0) no description available & (gnl|cdd|67450 : 265.0) no description available & (reliability: 1428.0) & (original description: Putative RAD4, Description = DNA repair protein RAD4, PFAM = PF03835;PF10403;PF01841;PF10404;PF10405)' T '28.2' 'DNA.repair' 'niben044scf00000729ctg003_8525-11409' '(gnl|cdd|37207 : 183.0) no description available & (at1g30480 : 180.0) recombination and DNA-damage resistance protein (DRT111); DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 111 (DRT111); FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: DNA repair; LOCATED IN: chloroplast, nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), D111/G-patch (InterPro:IPR000467), Splicing factor, SPF45 (InterPro:IPR016967); Has 6802 Blast hits to 5609 proteins in 466 species: Archae - 14; Bacteria - 357; Metazoa - 3361; Fungi - 1024; Plants - 621; Viruses - 38; Other Eukaryotes - 1387 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative BnaA09g26060D, Description = BnaA09g26060D protein, PFAM = PF01585)' T '28.2' 'DNA.repair' 'niben044scf00001181ctg020_18121-22337' '(at3g28030 : 287.0) Required for repair of pyrimidine-pyrimidinone (6-4) dimers.; ULTRAVIOLET HYPERSENSITIVE 3 (UVH3); FUNCTIONS IN: protein binding, nuclease activity; INVOLVED IN: DNA repair, response to UV-B, response to heat, non-photoreactive DNA repair; LOCATED IN: nucleus; EXPRESSED IN: stem, leaf whorl, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: XPG conserved site (InterPro:IPR019974), Xeroderma pigmentosum group G protein (InterPro:IPR001044), XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G01880.1); Has 8115 Blast hits to 5779 proteins in 624 species: Archae - 528; Bacteria - 414; Metazoa - 2441; Fungi - 1496; Plants - 576; Viruses - 71; Other Eukaryotes - 2589 (source: NCBI BLink). & (gnl|cdd|37731 : 132.0) no description available & (reliability: 574.0) & (original description: Putative RAD2, Description = DNA-repair protein UVH3, putative, PFAM = )' T '28.2' 'DNA.repair' 'niben044scf00004197ctg015_1459-5206' '(at1g49980 : 251.0) DNA/RNA polymerases superfamily protein; FUNCTIONS IN: damaged DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA repair; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, Y-family, little finger domain (InterPro:IPR017961), DNA-repair protein, UmuC-like (InterPro:IPR001126), DNA-repair protein, UmuC-like, N-terminal (InterPro:IPR017963); BEST Arabidopsis thaliana protein match is: DNA-directed DNA polymerases (TAIR:AT5G44750.1); Has 10430 Blast hits to 10220 proteins in 2419 species: Archae - 210; Bacteria - 6752; Metazoa - 626; Fungi - 433; Plants - 141; Viruses - 0; Other Eukaryotes - 2268 (source: NCBI BLink). & (gnl|cdd|37305 : 138.0) no description available & (gnl|cdd|48491 : 90.2) no description available & (reliability: 502.0) & (original description: Putative polk, Description = DNA polymerase kappa, PFAM = PF11799)' T '28.2' 'DNA.repair' 'niben044scf00004510ctg016_7966-12744' '(at3g20475 : 177.0) Encodes MSH5, a homologue of the MutS-homolog family of genes required for normal levels of recombination in budding yeast, mouse and Caenorhabditis elegans. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers. Transcripts of AtMSH5 are specific to reproductive tissues and expression of the protein is abundant during prophase I of meiosis. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers.; MUTS-homologue 5 (MSH5); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, chiasma assembly, reciprocal meiotic recombination; LOCATED IN: condensed nuclear chromosome; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, IL.00 inflorescence just visible; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432); BEST Arabidopsis thaliana protein match is: MUTS homolog 2 (TAIR:AT3G18524.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative MSH5, Description = DNA mismatch repair protein MSH5, PFAM = )' T '28.2' 'DNA.repair' 'niben044scf00005589ctg002_13468-17306' '(gnl|cdd|38318 : 121.0) no description available & (at2g24490 : 119.0) Encodes a component of Replication Protein A. Component of transcriptional gene silencing which does not affect endogenous small RNA accumulation nor DNA methylation. Localized in the nucleus. Involved in DNA repair. Interacts physically with ROS1.; replicon protein A2 (RPA2); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Replication protein A, subunit RPA32 (InterPro:IPR014646), Replication protein A, C-terminal (InterPro:IPR014892), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365); BEST Arabidopsis thaliana protein match is: Replication protein A, subunit RPA32 (TAIR:AT3G02920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72950 : 84.9) no description available & (reliability: 238.0) & (original description: Putative rfa, Description = Putative Replication protein A 30 kDa subunit, PFAM = PF01336)' T '28.2' 'DNA.repair' 'niben044scf00005934ctg022_609-8718' '(at5g48120 : 485.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 594 Blast hits to 356 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 233; Plants - 48; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|37178 : 254.0) no description available & (reliability: 970.0) & (original description: Putative , Description = , PFAM = PF12460;PF14500)' T '28.2' 'DNA.repair' 'niben044scf00006305ctg003_8214-23027' '(at4g17380 : 1231.0) Encodes the Arabidopsis homolog of MSH4, a meiosis-specific member of the MutS-homolog family of genes. It is expressed only in floral tissues and only during early meiotic prophase I, preceding the synapsis of homologous chromosomes. It is involved in the early steps of recombination.; MUTS-like protein 4 (MSH4); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, synapsis, meiotic prophase I; LOCATED IN: condensed nuclear chromosome; EXPRESSED IN: flower, sporocyte; EXPRESSED DURING: petal differentiation and expansion stage, IL.00 inflorescence just visible; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS, core (InterPro:IPR007696); BEST Arabidopsis thaliana protein match is: MUTS homolog 2 (TAIR:AT3G18524.1); Has 13303 Blast hits to 13154 proteins in 2712 species: Archae - 169; Bacteria - 9120; Metazoa - 661; Fungi - 837; Plants - 451; Viruses - 3; Other Eukaryotes - 2062 (source: NCBI BLink). & (gnl|cdd|35441 : 600.0) no description available & (gnl|cdd|81564 : 370.0) no description available & (q9xgc9|msh2_maize : 151.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 2462.0) & (original description: Putative MSH4, Description = DNA mismatch repair protein MSH4, PFAM = PF05190;PF00488;PF05192)' T '28.2' 'DNA.repair' 'niben044scf00008003ctg004_1-7017' '(at3g18524 : 1142.0) Encodes a DNA mismatch repair homolog of human MutS gene, MSH6. MSH2 is involved in maintaining genome stability and repressing recombination of mismatched heteroduplexes.There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2 has different binding specificity to different mismatches in combination with MSH3, MSH6, or MSH7.; MUTS homolog 2 (MSH2); FUNCTIONS IN: damaged DNA binding, protein binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, negative regulation of reciprocal meiotic recombination; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695), DNA mismatch repair protein, MSH2 (InterPro:IPR011184); BEST Arabidopsis thaliana protein match is: homolog of DNA mismatch repair protein MSH3 (TAIR:AT4G25540.1); Has 13560 Blast hits to 13453 proteins in 2654 species: Archae - 128; Bacteria - 8942; Metazoa - 734; Fungi - 813; Plants - 457; Viruses - 3; Other Eukaryotes - 2483 (source: NCBI BLink). & (q9xgc9|msh2_maize : 1048.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (gnl|cdd|35440 : 650.0) no description available & (gnl|cdd|30598 : 431.0) no description available & (reliability: 2284.0) & (original description: Putative msh2, Description = Mismatch repair protein, PFAM = PF05188;PF05192;PF01624;PF05190;PF00488)' T '28.2' 'DNA.repair' 'niben044scf00008716ctg005_39-9306' '(at3g20475 : 420.0) Encodes MSH5, a homologue of the MutS-homolog family of genes required for normal levels of recombination in budding yeast, mouse and Caenorhabditis elegans. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers. Transcripts of AtMSH5 are specific to reproductive tissues and expression of the protein is abundant during prophase I of meiosis. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers.; MUTS-homologue 5 (MSH5); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, chiasma assembly, reciprocal meiotic recombination; LOCATED IN: condensed nuclear chromosome; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, IL.00 inflorescence just visible; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432); BEST Arabidopsis thaliana protein match is: MUTS homolog 2 (TAIR:AT3G18524.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35442 : 129.0) no description available & (gnl|cdd|30598 : 113.0) no description available & (reliability: 840.0) & (original description: Putative msh5, Description = DNA mismatch repair protein MSH5, PFAM = PF05192)' T '28.2' 'DNA.repair' 'niben044scf00010489ctg003_19091-33702' '(at5g04560 : 691.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 96.0) no description available & (reliability: 1376.0) & (original description: Putative DME2, Description = DNA demethylase, PFAM = PF15628;PF15629)' T '28.2' 'DNA.repair' 'niben044scf00011671ctg002_680-14467' '(at5g54260 : 898.0) DNA repair and meiotic recombination protein, component of MRE11 complex with RAD50 and NBS1; MEIOTIC RECOMBINATION 11 (MRE11); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, exonuclease activity, endonuclease activity; INVOLVED IN: double-strand break repair, DNA metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), DNA repair exonuclease (InterPro:IPR003701), Mre11, DNA-binding (InterPro:IPR007281); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37521 : 647.0) no description available & (gnl|cdd|67753 : 194.0) no description available & (reliability: 1796.0) & (original description: Putative mhm11, Description = Double-strand break repair protein MRE11, PFAM = PF04152;PF00149)' T '28.2' 'DNA.repair' 'niben044scf00012841ctg004_4570-8769' '(at5g44680 : 354.0) DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT3G12710.1); Has 3656 Blast hits to 3656 proteins in 1559 species: Archae - 10; Bacteria - 3140; Metazoa - 4; Fungi - 4; Plants - 168; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (gnl|cdd|86301 : 234.0) no description available & (reliability: 708.0) & (original description: Putative tag, Description = 3-methyladenine-DNA glycosylase I, PFAM = PF03352)' T '28.2' 'DNA.repair' 'niben044scf00015619ctg005_1-7290' '(at3g23100 : 103.0) A. thaliana homologue of the human DNA ligase IV-binding protein XRCC4. Yeast two-hybrid analysis demonstrated a strong interaction between A. thaliana DNA ligase IV and the A. thaliana homologue of the human DNA ligase IV-binding protein XRCC4. This interaction is shown to be mediated via the tandem BRCA C-terminal domains of A. thaliana DNA ligase IV protein.; homolog of human DNA ligase iv-binding protein XRCC4 (XRCC4); FUNCTIONS IN: protein C-terminus binding; INVOLVED IN: double-strand break repair, DNA recombination, metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), DNA double-strand break repair and VJ recombination XRCC4, C-terminal (InterPro:IPR014751), DNA double-strand break repair and VJ recombination XRCC4 (InterPro:IPR010585); BEST Arabidopsis thaliana protein match is: DNA double-strand break repair and VJ recombination XRCC4 (TAIR:AT1G61410.1); Has 189 Blast hits to 182 proteins in 54 species: Archae - 0; Bacteria - 3; Metazoa - 88; Fungi - 4; Plants - 48; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative XRCC4, Description = DNA repair protein XRCC4, PFAM = PF06632)' T '28.2' 'DNA.repair' 'niben044scf00016609ctg014_18982-23195' '(at4g09140 : 981.0) Encodes a protein with similarity to Mut1 DNA mismatch repair protein, from E.coli. The protein is expressed during prophase I of meiosis, colocalizes with MLH3 throughout pachytene and is dependent on MLH3 for proper localization.; MUTL-homologue 1 (MLH1); FUNCTIONS IN: protein binding, bridging; INVOLVED IN: in 6 processes; LOCATED IN: nuclear chromatin; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein Mlh1 (InterPro:IPR011186), DNA mismatch repair, conserved site (InterPro:IPR014762), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA mismatch repair protein, C-terminal (InterPro:IPR013507), DNA mismatch repair protein, N-terminal (InterPro:IPR014763), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA mismatch repair protein (InterPro:IPR002099), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: DNA mismatch repair protein, putative (TAIR:AT4G02460.1); Has 6802 Blast hits to 6727 proteins in 2342 species: Archae - 68; Bacteria - 4480; Metazoa - 469; Fungi - 496; Plants - 114; Viruses - 0; Other Eukaryotes - 1175 (source: NCBI BLink). & (gnl|cdd|37190 : 756.0) no description available & (gnl|cdd|30671 : 360.0) no description available & (reliability: 1962.0) & (original description: Putative MLH1, Description = DNA mismatch repair protein MLH1, PFAM = PF13589;PF01119;PF16413)' T '28.2' 'DNA.repair' 'niben044scf00016691ctg011_2985-7634' '(at4g31340 : 84.3) myosin heavy chain-related; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: DNA repair ATPase-related (TAIR:AT2G24420.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative PGSC0003DMG400028754, Description = Putative ovule protein, PFAM = )' T '28.2' 'DNA.repair' 'niben044scf00019467ctg006_1-3169' '(at1g01490 : 95.5) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G63950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 191.0) & (original description: Putative TCM_016336, Description = Heavy metal transport/detoxification superfamily protein, putative isoform 2, PFAM = PF00403)' T '28.2' 'DNA.repair' 'niben044scf00021509ctg008_448-9126' '(at3g24320 : 826.0) Promotes re-arrangements of mitochondrial genome. Mutations affects mitochondrial gene expression, and impairs mitochondrial function. Dual targeting of the protein to mitochondria and chloroplasts caused by alternative translation initiation.; MUTL protein homolog 1 (MSH1); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, catalytic activity, ATP binding, nuclease activity; INVOLVED IN: mismatch repair, mitochondrial genome maintenance, mitochondrial DNA metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), Excinuclease ABC, C subunit, N-terminal (InterPro:IPR000305), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695); BEST Arabidopsis thaliana protein match is: MUTS homolog 6 (TAIR:AT4G02070.2); Has 14048 Blast hits to 12806 proteins in 2713 species: Archae - 218; Bacteria - 10179; Metazoa - 621; Fungi - 751; Plants - 393; Viruses - 3; Other Eukaryotes - 1883 (source: NCBI BLink). & (gnl|cdd|35438 : 332.0) no description available & (gnl|cdd|73002 : 205.0) no description available & (reliability: 1652.0) & (original description: Putative CHM, Description = MSH1, PFAM = PF01541;PF00488)' T '28.2' 'DNA.repair' 'niben044scf00021759ctg009_13525-26716' '(at1g19485 : 493.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: A.T hook-like (InterPro:IPR020478), AT hook, DNA-binding motif (InterPro:IPR017956), WD40 repeat (InterPro:IPR001680), HMG-I/HMG-Y, DNA-binding, conserved site (InterPro:IPR000637), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781). & (reliability: 986.0) & (original description: Putative PGSC0003DMG400008959, Description = Putative general transcription factor 3C polypeptide 2-like, PFAM = )' T '28.2' 'DNA.repair' 'niben044scf00026015ctg005_3022-8411' '(at5g57970 : 346.0) DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G80850.1); Has 3809 Blast hits to 3727 proteins in 1589 species: Archae - 10; Bacteria - 3189; Metazoa - 57; Fungi - 9; Plants - 164; Viruses - 0; Other Eukaryotes - 380 (source: NCBI BLink). & (gnl|cdd|86301 : 253.0) no description available & (reliability: 692.0) & (original description: Putative tag, Description = 3-methyl-adenine DNA glycosylase I, constitutive, PFAM = PF03352)' T '28.2' 'DNA.repair' 'niben044scf00026735ctg003_666-7269' '(at1g77320 : 509.0) Mutant is defective in meiosis and produces abnormal microspores. Encodes a BRCT-domain-containing protein that could be specific to the meiotic cell cycle and that plays a crucial role in some DNA repair events independent of SPO11 DSB recombination repair.; meiosis defective 1 (MEI1); FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: female meiosis, reciprocal meiotic recombination, response to DNA damage stimulus, male meiosis; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357). & (gnl|cdd|37140 : 147.0) no description available & (reliability: 1018.0) & (original description: Putative MEI1, Description = DNA topoisomerase 2-binding protein 1-A, PFAM = PF12738;PF12738)' T '28.2' 'DNA.repair' 'niben044scf00028510ctg007_319-11807' '(at3g02540 : 417.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23C (RAD23C); FUNCTIONS IN: ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT5G38470.1). & (gnl|cdd|35235 : 359.0) no description available & (q40742|rad23_orysa : 345.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (gnl|cdd|29207 : 114.0) no description available & (reliability: 804.0) & (original description: Putative RAD23C, Description = Ubiquitin receptor RAD23c, PFAM = PF00627;PF00627;PF00240;PF09280)' T '28.2' 'DNA.repair' 'niben044scf00029028ctg002_1-2598' '(at1g80420 : 157.0) ATXRCC1; FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: DNA repair; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357). & (gnl|cdd|38436 : 155.0) no description available & (reliability: 314.0) & (original description: Putative xrcc1, Description = DNA repair protein XRCC1, PFAM = PF00533)' T '28.2' 'DNA.repair' 'niben044scf00039174ctg004_3066-6199' '(at3g20475 : 237.0) Encodes MSH5, a homologue of the MutS-homolog family of genes required for normal levels of recombination in budding yeast, mouse and Caenorhabditis elegans. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers. Transcripts of AtMSH5 are specific to reproductive tissues and expression of the protein is abundant during prophase I of meiosis. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers.; MUTS-homologue 5 (MSH5); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, chiasma assembly, reciprocal meiotic recombination; LOCATED IN: condensed nuclear chromosome; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, IL.00 inflorescence just visible; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432); BEST Arabidopsis thaliana protein match is: MUTS homolog 2 (TAIR:AT3G18524.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35442 : 151.0) no description available & (gnl|cdd|81564 : 103.0) no description available & (reliability: 474.0) & (original description: Putative msh5, Description = DNA mismatch repair protein MSH5, PFAM = )' T '28.2' 'DNA.repair' 'niben044scf00041686ctg010_1-4628' '(at4g29170 : 285.0) A homolog of yeast, mouse and human mnd1delta protein. Null mutants exhibit normal vegetative and flower development; however, during prophase I, chromosomes become fragmented resulting in random distribution of the fragments between polyads. Both male and female meiosis are defective and strong accumulation of AtRAD51 was observed in the inflorescence nuclei of mutant plants. Similarly to its yeast and animal homologues, AtMnd1 might play a role in DSB repair during meiosis.; ATMND1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: double-strand break repair, embryo sac development, response to ionizing radiation, pollen development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Meiotic nuclear division protein 1 (InterPro:IPR005647); Has 323 Blast hits to 323 proteins in 161 species: Archae - 0; Bacteria - 2; Metazoa - 88; Fungi - 122; Plants - 42; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|67571 : 178.0) no description available & (gnl|cdd|38643 : 171.0) no description available & (reliability: 570.0) & (original description: Putative MND1, Description = Meiotic nuclear division protein 1 homolog, PFAM = PF03962)' T '28.2' 'DNA.repair' 'niben044scf00042214ctg002_1-7309' '(at4g25290 : 679.0) DNA photolyases;DNA photolyases; FUNCTIONS IN: DNA photolyase activity; INVOLVED IN: DNA repair; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G36530.1); Has 6717 Blast hits to 6715 proteins in 1229 species: Archae - 120; Bacteria - 4210; Metazoa - 285; Fungi - 40; Plants - 525; Viruses - 0; Other Eukaryotes - 1537 (source: NCBI BLink). & (gnl|cdd|36667 : 135.0) no description available & (gnl|cdd|30941 : 97.1) no description available & (reliability: 1358.0) & (original description: Putative pco082395, Description = Deoxyribodipyrimidine photolyase family protein, PFAM = PF12697;PF00875)' T '28.2' 'DNA.repair' 'niben044scf00045685ctg005_1540-3872' '(gnl|cdd|37207 : 189.0) no description available & (at1g30480 : 172.0) recombination and DNA-damage resistance protein (DRT111); DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 111 (DRT111); FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: DNA repair; LOCATED IN: chloroplast, nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), D111/G-patch (InterPro:IPR000467), Splicing factor, SPF45 (InterPro:IPR016967); Has 6802 Blast hits to 5609 proteins in 466 species: Archae - 14; Bacteria - 357; Metazoa - 3361; Fungi - 1024; Plants - 621; Viruses - 38; Other Eukaryotes - 1387 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative BnaA09g26060D, Description = BnaA09g26060D protein, PFAM = PF01585)' T '28.2' 'DNA.repair' 'niben044scf00046891ctg006_1613-13767' '(at5g04560 : 541.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 102.0) no description available & (reliability: 1056.0) & (original description: Putative pg3, Description = Protein ROS1, PFAM = PF15628)' T '28.2' 'DNA.repair' 'niben044scf00048234ctg004_1-2986' '(at5g44680 : 357.0) DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT3G12710.1); Has 3656 Blast hits to 3656 proteins in 1559 species: Archae - 10; Bacteria - 3140; Metazoa - 4; Fungi - 4; Plants - 168; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (gnl|cdd|86301 : 227.0) no description available & (reliability: 714.0) & (original description: Putative tag, Description = 3-methyladenine-DNA glycosylase I, PFAM = PF03352)' T '28.2' 'DNA.repair' 'niben044scf00053295ctg003_27569-29956' '(gnl|cdd|36220 : 110.0) no description available & (at1g02670 : 108.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Helicase protein with RING/U-box domain (TAIR:AT1G05120.1); Has 20658 Blast hits to 14879 proteins in 1788 species: Archae - 141; Bacteria - 6646; Metazoa - 3824; Fungi - 4666; Plants - 1875; Viruses - 121; Other Eukaryotes - 3385 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative At1g02670, Description = ATP-dependent helicase rhp16, PFAM = PF00176)' T '28.2' 'DNA.repair' 'niben044scf00057660ctg000_1-8937' '(at5g48120 : 403.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 594 Blast hits to 356 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 233; Plants - 48; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|37178 : 224.0) no description available & (reliability: 806.0) & (original description: Putative MET18, Description = MMS19 nucleotide excision repair protein isogeny, PFAM = PF14500)' T '28.2' 'DNA.repair' 'niben101ctg14912_605-3212' '(at3g24320 : 103.0) Promotes re-arrangements of mitochondrial genome. Mutations affects mitochondrial gene expression, and impairs mitochondrial function. Dual targeting of the protein to mitochondria and chloroplasts caused by alternative translation initiation.; MUTL protein homolog 1 (MSH1); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, catalytic activity, ATP binding, nuclease activity; INVOLVED IN: mismatch repair, mitochondrial genome maintenance, mitochondrial DNA metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), Excinuclease ABC, C subunit, N-terminal (InterPro:IPR000305), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695); BEST Arabidopsis thaliana protein match is: MUTS homolog 6 (TAIR:AT4G02070.2); Has 14048 Blast hits to 12806 proteins in 2713 species: Archae - 218; Bacteria - 10179; Metazoa - 621; Fungi - 751; Plants - 393; Viruses - 3; Other Eukaryotes - 1883 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative CHM, Description = MSH1, PFAM = )' T '28.2' 'DNA.repair' 'niben101scf00146_49274-59562' '(at3g47830 : 320.0) DNA glycosylase superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, base-excision repair; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 4804 Blast hits to 4804 proteins in 1691 species: Archae - 231; Bacteria - 3044; Metazoa - 109; Fungi - 99; Plants - 198; Viruses - 0; Other Eukaryotes - 1123 (source: NCBI BLink). & (gnl|cdd|30526 : 108.0) no description available & (reliability: 640.0) & (original description: Putative At3g47830, Description = Putative DNA glycosylase At3g47830, PFAM = PF00730)' T '28.2' 'DNA.repair' 'niben101scf00212_234088-267828' '(at3g14890 : 378.0) phosphoesterase; FUNCTIONS IN: DNA binding, catalytic activity, zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIIA (InterPro:IPR006549), Polynucleotide kinase 3 phosphatase, central region (InterPro:IPR013954), Zinc finger, PARP-type (InterPro:IPR001510), Polynucleotide kinase 3, phosphatase (InterPro:IPR015636), DNA 3-phosphatase (InterPro:IPR006551); BEST Arabidopsis thaliana protein match is: poly(ADP-ribose) polymerase 2 (TAIR:AT2G31320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87586 : 174.0) no description available & (gnl|cdd|37345 : 118.0) no description available & (reliability: 756.0) & (original description: Putative ZDP, Description = Bifunctional polynucleotide phosphatase/kinase, PFAM = PF08645;PF00645)' T '28.2' 'DNA.repair' 'niben101scf00254_917102-929829' '(at5g41370 : 1302.0) Encodes XPB1, a DNA repair protein and transcription factor. Arabidopsis thaliana has duplicated XPB gene (AtXPB1 and AtXPB2, with high similarity to each other). XPB proteins are involved in both DNA repair and transcription, they are component of the transcription factor IIH (TFIIH) and are responsible for DNA helicase activity during nucleotide (nt) excision repair (NER). Complementation assays in yeast rad25 mutant strains suggest the involvement of AtXPB2 in DNA repair. Although both genes are expressed in a constitutive manner during the plant life cycle, Northern blot analyses suggest that light modulates the expression level of both XPB copies.; homolog of xeroderma pigmentosum complementation group B 1 (XPB1); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to UV, response to toxin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: whole plant, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001), Xeroderma pigmentosum group B protein (XP-B) (InterPro:IPR001161), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: homolog of Xeroderma pigmentosum complementation group B 2 (TAIR:AT5G41360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36339 : 1126.0) no description available & (gnl|cdd|31261 : 270.0) no description available & (reliability: 2604.0) & (original description: Putative XPB1, Description = DNA repair helicase XPB1, PFAM = PF13625;PF04851;PF16203)' T '28.2' 'DNA.repair' 'niben101scf00270_1069380-1097763' '(at1g16970 : 826.0) Ku80 and ku70 form the heterodimer complex Ku, required for proper maintenance of the telomeric C strand. Ku regulates the extension of the telomeric G strand. Interacts with WEX, and this interaction stimulates the WEX exonuclease activity.; KU70 homolog (KU70); FUNCTIONS IN: double-stranded DNA binding, protein binding; INVOLVED IN: DNA repair, response to heat, telomere maintenance; LOCATED IN: nucleus, DNA-dependent protein kinase-DNA ligase 4 complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ku70/Ku80, N-terminal alpha/beta (InterPro:IPR005161), DNA-binding SAP (InterPro:IPR003034), DNA helicase, ATP-dependent, Ku type (InterPro:IPR006164), Spen Paralogue and Orthologue SPOC, C-terminal-like (InterPro:IPR016194), Ku70/Ku80 C-terminal arm (InterPro:IPR005160), DNA helicase, ATP-dependent, Ku70 subunit (InterPro:IPR006165); Has 475 Blast hits to 466 proteins in 181 species: Archae - 0; Bacteria - 6; Metazoa - 182; Fungi - 177; Plants - 52; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|63880 : 244.0) no description available & (gnl|cdd|37538 : 217.0) no description available & (reliability: 1652.0) & (original description: Putative KU70, Description = ATP-dependent DNA helicase 2 subunit KU70, PFAM = PF02735;PF03731;PF02037;PF03730)' T '28.2' 'DNA.repair' 'niben101scf00293_295761-322299' '(at1g77320 : 907.0) Mutant is defective in meiosis and produces abnormal microspores. Encodes a BRCT-domain-containing protein that could be specific to the meiotic cell cycle and that plays a crucial role in some DNA repair events independent of SPO11 DSB recombination repair.; meiosis defective 1 (MEI1); FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: female meiosis, reciprocal meiotic recombination, response to DNA damage stimulus, male meiosis; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357). & (gnl|cdd|37140 : 163.0) no description available & (reliability: 1814.0) & (original description: Putative MEI1, Description = Meiosis defective 1, PFAM = PF00533;PF16589;PF12738;PF12738;PF12738)' T '28.2' 'DNA.repair' 'niben101scf00360_11318-17755' '(at5g24850 : 775.0) Binds flavin adenine dinucleotide and DNA. It does not have photolyase activity, and it is likely to act as photoreceptor. Closely related to Synechocystis cryptochrome.; cryptochrome 3 (CRY3); FUNCTIONS IN: FMN binding, DNA binding, DNA photolyase activity; INVOLVED IN: DNA repair; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), Cryptochrome, DASH (InterPro:IPR014133), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101), Cryptochrome/DNA photolyase, class 1 (InterPro:IPR002081); BEST Arabidopsis thaliana protein match is: photolyase/blue-light receptor 2 (TAIR:AT2G47590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q651u1|cryd_orysa : 741.0) Cryptochrome DASH, chloroplast/mitochondrial precursor - Oryza sativa (Rice) & (gnl|cdd|30764 : 347.0) no description available & (gnl|cdd|35355 : 184.0) no description available & (reliability: 1550.0) & (original description: Putative CRYD, Description = Cryptochrome DASH, chloroplastic/mitochondrial, PFAM = PF00875;PF03441)' T '28.2' 'DNA.repair' 'niben101scf00360_11405-15288' '(at5g24850 : 363.0) Binds flavin adenine dinucleotide and DNA. It does not have photolyase activity, and it is likely to act as photoreceptor. Closely related to Synechocystis cryptochrome.; cryptochrome 3 (CRY3); FUNCTIONS IN: FMN binding, DNA binding, DNA photolyase activity; INVOLVED IN: DNA repair; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), Cryptochrome, DASH (InterPro:IPR014133), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101), Cryptochrome/DNA photolyase, class 1 (InterPro:IPR002081); BEST Arabidopsis thaliana protein match is: photolyase/blue-light receptor 2 (TAIR:AT2G47590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q651u1|cryd_orysa : 347.0) Cryptochrome DASH, chloroplast/mitochondrial precursor - Oryza sativa (Rice) & (gnl|cdd|30764 : 118.0) no description available & (reliability: 726.0) & (original description: Putative CRY3, Description = Cryptochrome DASH, chloroplastic/mitochondrial, PFAM = PF00875)' T '28.2' 'DNA.repair' 'niben101scf00571_662329-680963' '(at5g44740 : 682.0) Y-family DNA polymerase. Catalyses translesion synthesis in response to UV damage. Functionally interacts with PCNA2. Has a ubiquitin binding motif.; Y-family DNA polymerase H (POLH); CONTAINS InterPro DOMAIN/s: DNA polymerase eta (InterPro:IPR017061), DNA-repair protein, UmuC-like (InterPro:IPR001126), DNA-repair protein, UmuC-like, N-terminal (InterPro:IPR017963); BEST Arabidopsis thaliana protein match is: DNA-directed DNA polymerases (TAIR:AT5G44750.1); Has 8088 Blast hits to 8015 proteins in 2292 species: Archae - 210; Bacteria - 5635; Metazoa - 500; Fungi - 401; Plants - 163; Viruses - 3; Other Eukaryotes - 1176 (source: NCBI BLink). & (gnl|cdd|37306 : 429.0) no description available & (gnl|cdd|73283 : 325.0) no description available & (reliability: 1364.0) & (original description: Putative POLH, Description = DNA polymerase eta, PFAM = PF00817;PF11799)' T '28.2' 'DNA.repair' 'niben101scf00675_430377-437001' '(at3g13226 : 166.0) regulatory protein RecX family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of DNA repair; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Regulatory protein RecX (InterPro:IPR003783); Has 1697 Blast hits to 1697 proteins in 756 species: Archae - 0; Bacteria - 1482; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 180 (source: NCBI BLink). & (gnl|cdd|80526 : 91.0) no description available & (reliability: 332.0) & (original description: Putative Os04g0667900, Description = Os04g0667900 protein, PFAM = PF02631)' T '28.2' 'DNA.repair' 'niben101scf00799_149319-156388' '(at1g21710 : 446.0) Encodes 8-oxoguanine-DNA glycosylase. DNA repair enzyme.; 8-oxoguanine-DNA glycosylase 1 (OGG1); FUNCTIONS IN: oxidized purine base lesion DNA N-glycosylase activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Helix-hairpin-helix DNA-binding motif, class 1 (InterPro:IPR003583), Transcription factor TFIID, C-terminal/DNA glycosylase, N-terminal (InterPro:IPR012294), 8-oxoguanine DNA glycosylase, N-terminal (InterPro:IPR012904), HhH-GPD domain (InterPro:IPR003265); Has 951 Blast hits to 936 proteins in 417 species: Archae - 106; Bacteria - 332; Metazoa - 176; Fungi - 163; Plants - 46; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|38086 : 335.0) no description available & (gnl|cdd|30471 : 122.0) no description available & (reliability: 892.0) & (original description: Putative OGG1, Description = N-glycosylase/DNA lyase OGG1, PFAM = PF07934;PF00730)' T '28.2' 'DNA.repair' 'niben101scf00894_162375-174064' '(at3g02540 : 427.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23C (RAD23C); FUNCTIONS IN: ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT5G38470.1). & (q40742|rad23_orysa : 360.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (gnl|cdd|35235 : 355.0) no description available & (gnl|cdd|29207 : 114.0) no description available & (reliability: 818.0) & (original description: Putative HR23, Description = Putative DNA repair protein RAD23-1, PFAM = PF00627;PF00627;PF09280;PF00240)' T '28.2' 'DNA.repair' 'niben101scf01027_110315-113613' '(at1g01490 : 85.1) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G63950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative Sb06g032110, Description = Putative uncharacterized protein Sb06g032110, PFAM = PF00403)' T '28.2' 'DNA.repair' 'niben101scf01116_181327-187039' '(at1g79050 : 599.0) recA DNA recombination family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, SOS response, DNA recombination, DNA metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination/repair protein RecA, conserved site (InterPro:IPR020584), DNA recombination and repair protein RecA (InterPro:IPR013765), DNA recombination/repair protein RecA, monomer-monomer interface (InterPro:IPR020587); BEST Arabidopsis thaliana protein match is: recA DNA recombination family protein (TAIR:AT2G19490.1); Has 19704 Blast hits to 19632 proteins in 5647 species: Archae - 493; Bacteria - 14777; Metazoa - 222; Fungi - 191; Plants - 243; Viruses - 74; Other Eukaryotes - 3704 (source: NCBI BLink). & (gnl|cdd|82947 : 485.0) no description available & (gnl|cdd|36646 : 184.0) no description available & (reliability: 1198.0) & (original description: Putative RECA, Description = DNA repair protein recA homolog 1, chloroplastic, PFAM = PF00154)' T '28.2' 'DNA.repair' 'niben101scf01221_319285-340108' '(at3g24320 : 842.0) Promotes re-arrangements of mitochondrial genome. Mutations affects mitochondrial gene expression, and impairs mitochondrial function. Dual targeting of the protein to mitochondria and chloroplasts caused by alternative translation initiation.; MUTL protein homolog 1 (MSH1); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, catalytic activity, ATP binding, nuclease activity; INVOLVED IN: mismatch repair, mitochondrial genome maintenance, mitochondrial DNA metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), Excinuclease ABC, C subunit, N-terminal (InterPro:IPR000305), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695); BEST Arabidopsis thaliana protein match is: MUTS homolog 6 (TAIR:AT4G02070.2); Has 14048 Blast hits to 12806 proteins in 2713 species: Archae - 218; Bacteria - 10179; Metazoa - 621; Fungi - 751; Plants - 393; Viruses - 3; Other Eukaryotes - 1883 (source: NCBI BLink). & (gnl|cdd|35438 : 364.0) no description available & (gnl|cdd|73002 : 120.0) no description available & (reliability: 1684.0) & (original description: Putative CHM, Description = MSH1, PFAM = PF01541;PF01624;PF00488)' T '28.2' 'DNA.repair' 'niben101scf01266_222333-227727' '(at3g26680 : 562.0) Involved in a SNM-dependent recombinational repair process of oxidatively induced DNA damage.; SENSITIVE TO NITROGEN MUSTARD 1 (SNM1); FUNCTIONS IN: hydrolase activity; INVOLVED IN: DNA repair, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279), DNA repair metallo-beta-lactamase (InterPro:IPR011084); BEST Arabidopsis thaliana protein match is: sterile alpha motif (SAM) domain-containing protein (TAIR:AT2G45700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36575 : 361.0) no description available & (gnl|cdd|87294 : 109.0) no description available & (reliability: 1124.0) & (original description: Putative SNM1, Description = DNA cross-link repair protein SNM1, PFAM = PF07522)' T '28.2' 'DNA.repair' 'niben101scf01330_74352-91190' '(at2g24420 : 353.0) DNA repair ATPase-related; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT4G31340.1); Has 49908 Blast hits to 28607 proteins in 1979 species: Archae - 936; Bacteria - 7564; Metazoa - 22725; Fungi - 3757; Plants - 2190; Viruses - 187; Other Eukaryotes - 12549 (source: NCBI BLink). & (reliability: 706.0) & (original description: Putative PGSC0003DMG400014854, Description = Putative uncharacterized protein At4g31340, PFAM = )' T '28.2' 'DNA.repair' 'niben101scf01374_1146259-1168528' '(at5g48120 : 444.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 594 Blast hits to 356 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 233; Plants - 48; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|37178 : 261.0) no description available & (reliability: 888.0) & (original description: Putative MET18, Description = MMS19 nucleotide excision repair protein isogeny, PFAM = PF14500)' T '28.2' 'DNA.repair' 'niben101scf01374_1147250-1158486' '(at5g48120 : 338.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 594 Blast hits to 356 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 233; Plants - 48; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|37178 : 205.0) no description available & (reliability: 676.0) & (original description: Putative MET18, Description = MMS19 nucleotide excision repair protein isogeny, PFAM = PF14500)' T '28.2' 'DNA.repair' 'niben101scf01376_296343-299492' '(at1g16970 : 171.0) Ku80 and ku70 form the heterodimer complex Ku, required for proper maintenance of the telomeric C strand. Ku regulates the extension of the telomeric G strand. Interacts with WEX, and this interaction stimulates the WEX exonuclease activity.; KU70 homolog (KU70); FUNCTIONS IN: double-stranded DNA binding, protein binding; INVOLVED IN: DNA repair, response to heat, telomere maintenance; LOCATED IN: nucleus, DNA-dependent protein kinase-DNA ligase 4 complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ku70/Ku80, N-terminal alpha/beta (InterPro:IPR005161), DNA-binding SAP (InterPro:IPR003034), DNA helicase, ATP-dependent, Ku type (InterPro:IPR006164), Spen Paralogue and Orthologue SPOC, C-terminal-like (InterPro:IPR016194), Ku70/Ku80 C-terminal arm (InterPro:IPR005160), DNA helicase, ATP-dependent, Ku70 subunit (InterPro:IPR006165); Has 475 Blast hits to 466 proteins in 181 species: Archae - 0; Bacteria - 6; Metazoa - 182; Fungi - 177; Plants - 52; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|29231 : 81.9) no description available & (reliability: 342.0) & (original description: Putative KU70, Description = ATP-dependent DNA helicase 2 subunit KU70, PFAM = PF03731)' T '28.2' 'DNA.repair' 'niben101scf01429_52520-65849' '(at3g02920 : 223.0) RPA32B; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication protein A, subunit RPA32 (InterPro:IPR014646), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication protein A, C-terminal (InterPro:IPR014892); BEST Arabidopsis thaliana protein match is: replicon protein A2 (TAIR:AT2G24490.2). & (gnl|cdd|38318 : 200.0) no description available & (gnl|cdd|34832 : 120.0) no description available & (reliability: 432.0) & (original description: Putative rfa, Description = Putative replication factor A, PFAM = PF08784)' T '28.2' 'DNA.repair' 'niben101scf01438_435323-442888' '(at2g24490 : 218.0) Encodes a component of Replication Protein A. Component of transcriptional gene silencing which does not affect endogenous small RNA accumulation nor DNA methylation. Localized in the nucleus. Involved in DNA repair. Interacts physically with ROS1.; replicon protein A2 (RPA2); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Replication protein A, subunit RPA32 (InterPro:IPR014646), Replication protein A, C-terminal (InterPro:IPR014892), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365); BEST Arabidopsis thaliana protein match is: Replication protein A, subunit RPA32 (TAIR:AT3G02920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38318 : 185.0) no description available & (gnl|cdd|34832 : 130.0) no description available & (reliability: 436.0) & (original description: Putative RPA2A, Description = Replication protein A 32 kDa subunit A, PFAM = PF01336;PF08784)' T '28.2' 'DNA.repair' 'niben101scf01438_511143-544026' '(at3g24495 : 762.0) encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH7 exhibit moderate affinity for a (T/G) substrate and weak binding of (+T), suggesting MSH2*MSH7 may be specialized for lesions/base mispairs not tested or for (T/G) mispairs in special contexts.; MUTS homolog 7 (MSH7); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-homologue MSH6 (InterPro:IPR015536), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695); BEST Arabidopsis thaliana protein match is: MUTS homolog 6 (TAIR:AT4G02070.2); Has 17871 Blast hits to 13835 proteins in 2667 species: Archae - 197; Bacteria - 11731; Metazoa - 1028; Fungi - 1274; Plants - 566; Viruses - 3; Other Eukaryotes - 3072 (source: NCBI BLink). & (gnl|cdd|35438 : 280.0) no description available & (gnl|cdd|73045 : 254.0) no description available & (q9xgc9|msh2_maize : 124.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 1524.0) & (original description: Putative mus2, Description = DNA mismatch repair protein Msh6-2, PFAM = PF01624;PF00488;PF05188;PF05192)' T '28.2' 'DNA.repair' 'niben101scf01438_516310-536127' '(at3g24495 : 382.0) encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH7 exhibit moderate affinity for a (T/G) substrate and weak binding of (+T), suggesting MSH2*MSH7 may be specialized for lesions/base mispairs not tested or for (T/G) mispairs in special contexts.; MUTS homolog 7 (MSH7); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-homologue MSH6 (InterPro:IPR015536), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695); BEST Arabidopsis thaliana protein match is: MUTS homolog 6 (TAIR:AT4G02070.2); Has 17871 Blast hits to 13835 proteins in 2667 species: Archae - 197; Bacteria - 11731; Metazoa - 1028; Fungi - 1274; Plants - 566; Viruses - 3; Other Eukaryotes - 3072 (source: NCBI BLink). & (gnl|cdd|35438 : 118.0) no description available & (gnl|cdd|30598 : 99.6) no description available & (reliability: 764.0) & (original description: Putative mus2, Description = DNA mismatch repair protein Msh6-2, PFAM = PF01624;PF05188)' T '28.2' 'DNA.repair' 'niben101scf01606_269829-288861' '(at5g54090 : 716.0) DNA mismatch repair protein MutS, type 2; FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, maintenance of fidelity involved in DNA-dependent DNA replication; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, type 2 (InterPro:IPR005747), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS, core (InterPro:IPR007696); BEST Arabidopsis thaliana protein match is: DNA mismatch repair protein MutS, type 2 (TAIR:AT1G65070.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80654 : 431.0) no description available & (gnl|cdd|35439 : 109.0) no description available & (reliability: 1432.0) & (original description: Putative mutS2, Description = Endonuclease MutS2, PFAM = PF00488)' T '28.2' 'DNA.repair' 'niben101scf01655_448950-452709' '(at1g01490 : 94.7) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G63950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative Ccrd_008947, Description = Heavy metal-associated domain, HMA, PFAM = PF00403)' T '28.2' 'DNA.repair' 'niben101scf01740_194841-202751' '(at4g25290 : 698.0) DNA photolyases;DNA photolyases; FUNCTIONS IN: DNA photolyase activity; INVOLVED IN: DNA repair; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G36530.1); Has 6717 Blast hits to 6715 proteins in 1229 species: Archae - 120; Bacteria - 4210; Metazoa - 285; Fungi - 40; Plants - 525; Viruses - 0; Other Eukaryotes - 1537 (source: NCBI BLink). & (gnl|cdd|36667 : 134.0) no description available & (gnl|cdd|30941 : 96.7) no description available & (reliability: 1396.0) & (original description: Putative pco082395, Description = Deoxyribodipyrimidine photolyase family protein, PFAM = PF00875;PF12697)' T '28.2' 'DNA.repair' 'niben101scf01779_407505-419087' '(at4g31340 : 354.0) myosin heavy chain-related; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: DNA repair ATPase-related (TAIR:AT2G24420.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 708.0) & (original description: Putative At4g31340, Description = AT4G31340 protein, PFAM = )' T '28.2' 'DNA.repair' 'niben101scf01795_932453-940095' '(at1g19025 : 515.0) DNA repair metallo-beta-lactamase family protein; CONTAINS InterPro DOMAIN/s: DNA repair metallo-beta-lactamase (InterPro:IPR011084); BEST Arabidopsis thaliana protein match is: DNA repair metallo-beta-lactamase family protein (TAIR:AT1G27410.1); Has 1078 Blast hits to 1060 proteins in 342 species: Archae - 34; Bacteria - 280; Metazoa - 259; Fungi - 220; Plants - 166; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (gnl|cdd|36575 : 128.0) no description available & (reliability: 1030.0) & (original description: Putative At1g19025, Description = DNA repair metallo-beta-lactamase family protein, PFAM = PF07522)' T '28.2' 'DNA.repair' 'niben101scf01866_193851-219481' '(at1g07745 : 310.0) Is a suppressor of SNI1. Encodes a member of the RecA/RAD51 family of DNA recombination and repair proteins. Both RAD51 and SNI1 have a dual role in pathogen-related gene transcription and somatic homologous recombination.; homolog of RAD51 D (RAD51D); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: DNA repair, somatic cell DNA recombination, regulation of response to biotic stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell, male gametophyte, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis thaliana protein match is: DNA repair (Rad51) family protein (TAIR:AT2G28560.1); Has 4124 Blast hits to 4124 proteins in 1258 species: Archae - 446; Bacteria - 1629; Metazoa - 719; Fungi - 404; Plants - 385; Viruses - 2; Other Eukaryotes - 539 (source: NCBI BLink). & (gnl|cdd|29989 : 116.0) no description available & (gnl|cdd|36646 : 95.5) no description available & (reliability: 620.0) & (original description: Putative RAD51D, Description = RAD51D splice variant f, PFAM = PF08423)' T '28.2' 'DNA.repair' 'niben101scf01888_996622-1004075' '(at1g21710 : 443.0) Encodes 8-oxoguanine-DNA glycosylase. DNA repair enzyme.; 8-oxoguanine-DNA glycosylase 1 (OGG1); FUNCTIONS IN: oxidized purine base lesion DNA N-glycosylase activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Helix-hairpin-helix DNA-binding motif, class 1 (InterPro:IPR003583), Transcription factor TFIID, C-terminal/DNA glycosylase, N-terminal (InterPro:IPR012294), 8-oxoguanine DNA glycosylase, N-terminal (InterPro:IPR012904), HhH-GPD domain (InterPro:IPR003265); Has 951 Blast hits to 936 proteins in 417 species: Archae - 106; Bacteria - 332; Metazoa - 176; Fungi - 163; Plants - 46; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|38086 : 334.0) no description available & (gnl|cdd|30471 : 122.0) no description available & (reliability: 886.0) & (original description: Putative ogg1, Description = N-glycosylase/DNA lyase, PFAM = PF00730;PF07934)' T '28.2' 'DNA.repair' 'niben101scf01927_955143-960740' '(at4g29170 : 288.0) A homolog of yeast, mouse and human mnd1delta protein. Null mutants exhibit normal vegetative and flower development; however, during prophase I, chromosomes become fragmented resulting in random distribution of the fragments between polyads. Both male and female meiosis are defective and strong accumulation of AtRAD51 was observed in the inflorescence nuclei of mutant plants. Similarly to its yeast and animal homologues, AtMnd1 might play a role in DSB repair during meiosis.; ATMND1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: double-strand break repair, embryo sac development, response to ionizing radiation, pollen development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Meiotic nuclear division protein 1 (InterPro:IPR005647); Has 323 Blast hits to 323 proteins in 161 species: Archae - 0; Bacteria - 2; Metazoa - 88; Fungi - 122; Plants - 42; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|67571 : 178.0) no description available & (gnl|cdd|38643 : 172.0) no description available & (reliability: 576.0) & (original description: Putative MND1, Description = Meiotic nuclear division protein 1 homolog, PFAM = PF03962)' T '28.2' 'DNA.repair' 'niben101scf01999_671386-675608' '(at5g41370 : 1096.0) Encodes XPB1, a DNA repair protein and transcription factor. Arabidopsis thaliana has duplicated XPB gene (AtXPB1 and AtXPB2, with high similarity to each other). XPB proteins are involved in both DNA repair and transcription, they are component of the transcription factor IIH (TFIIH) and are responsible for DNA helicase activity during nucleotide (nt) excision repair (NER). Complementation assays in yeast rad25 mutant strains suggest the involvement of AtXPB2 in DNA repair. Although both genes are expressed in a constitutive manner during the plant life cycle, Northern blot analyses suggest that light modulates the expression level of both XPB copies.; homolog of xeroderma pigmentosum complementation group B 1 (XPB1); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to UV, response to toxin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: whole plant, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001), Xeroderma pigmentosum group B protein (XP-B) (InterPro:IPR001161), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: homolog of Xeroderma pigmentosum complementation group B 2 (TAIR:AT5G41360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36339 : 1025.0) no description available & (gnl|cdd|31261 : 264.0) no description available & (reliability: 2192.0) & (original description: Putative XPB1, Description = DNA repair helicase XPB1, PFAM = PF16203;PF13625;PF04851)' T '28.2' 'DNA.repair' 'niben101scf02100_19942-23411' '(at1g19480 : 325.0) DNA glycosylase superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G75230.1); Has 4597 Blast hits to 4597 proteins in 1093 species: Archae - 62; Bacteria - 2351; Metazoa - 1; Fungi - 142; Plants - 80; Viruses - 0; Other Eukaryotes - 1961 (source: NCBI BLink). & (gnl|cdd|37129 : 260.0) no description available & (gnl|cdd|30471 : 161.0) no description available & (reliability: 650.0) & (original description: Putative PHYPADRAFT_217626, Description = Predicted protein, PFAM = PF00730)' T '28.2' 'DNA.repair' 'niben101scf02123_1089080-1092398' '(at3g20820 : 424.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction, defense response; LOCATED IN: apoplast, cell wall, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G12940.1); Has 70868 Blast hits to 23934 proteins in 998 species: Archae - 25; Bacteria - 4468; Metazoa - 12756; Fungi - 677; Plants - 48104; Viruses - 0; Other Eukaryotes - 4838 (source: NCBI BLink). & (p93194|rpk1_iponi : 148.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 94.3) no description available & (reliability: 808.0) & (original description: Putative lrr, Description = Leucine rich repeat protein, PFAM = PF13855;PF13855;PF08263)' T '28.2' 'DNA.repair' 'niben101scf02156_184850-200802' '(at5g38470 : 420.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23D (RAD23D); FUNCTIONS IN: damaged DNA binding, ubiquitin binding, proteasome binding; INVOLVED IN: response to cold, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), XPC-binding domain (InterPro:IPR015360), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT3G02540.3); Has 11236 Blast hits to 6362 proteins in 878 species: Archae - 4; Bacteria - 655; Metazoa - 4543; Fungi - 1476; Plants - 2522; Viruses - 172; Other Eukaryotes - 1864 (source: NCBI BLink). & (q40742|rad23_orysa : 359.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (gnl|cdd|35235 : 355.0) no description available & (gnl|cdd|29207 : 114.0) no description available & (reliability: 840.0) & (original description: Putative RAD23C, Description = Ubiquitin receptor RAD23c, PFAM = PF00627;PF00627;PF00240;PF09280)' T '28.2' 'DNA.repair' 'niben101scf02174_15095-17589' '(at4g08850 : 136.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein with leucine-rich repeat domain (TAIR:AT1G35710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 120.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 258.0) & (original description: Putative PGSC0003DMG400004164, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855)' T '28.2' 'DNA.repair' 'niben101scf02216_144465-149906' '(at3g20820 : 447.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction, defense response; LOCATED IN: apoplast, cell wall, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G12940.1); Has 70868 Blast hits to 23934 proteins in 998 species: Archae - 25; Bacteria - 4468; Metazoa - 12756; Fungi - 677; Plants - 48104; Viruses - 0; Other Eukaryotes - 4838 (source: NCBI BLink). & (p58823|pgip3_phavu : 140.0) Polygalacturonase inhibitor 3 precursor (Polygalacturonase-inhibiting protein) (PGIP-2) (PGIP-3) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|35665 : 83.9) no description available & (reliability: 868.0) & (original description: Putative lrr, Description = Leucine rich repeat protein, PFAM = PF13855;PF13855;PF08263)' T '28.2' 'DNA.repair' 'niben101scf02474_291595-299567' '(at1g52500 : 403.0) Encodes one of the splice variants of Arabidopsis thaliana MutM homolog. Encodes a formamidopyrimidine-DNA glycosylase that has abasic lyase activity and is able to nick double- stranded oligonucleotides containing 8-oxo-7,8-dihydroguanine (8-oxoG) in vitro.; MUTM homolog-1 (MMH-1); CONTAINS InterPro DOMAIN/s: Ribosomal protein S13-like, H2TH (InterPro:IPR010979), DNA glycosylase/AP lyase, H2TH DNA-binding (InterPro:IPR015886), DNA glycosylase/AP lyase, catalytic domain (InterPro:IPR012319), DNA glycosylase/AP lyase (InterPro:IPR000191); Has 11102 Blast hits to 10156 proteins in 2240 species: Archae - 10; Bacteria - 5065; Metazoa - 1812; Fungi - 570; Plants - 321; Viruses - 42; Other Eukaryotes - 3282 (source: NCBI BLink). & (gnl|cdd|80823 : 184.0) no description available & (reliability: 806.0) & (original description: Putative Os06g0643600, Description = Os06g0643600 protein, PFAM = PF06831;PF01149)' T '28.2' 'DNA.repair' 'niben101scf02509_1165350-1168453' '(at3g20820 : 437.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction, defense response; LOCATED IN: apoplast, cell wall, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G12940.1); Has 70868 Blast hits to 23934 proteins in 998 species: Archae - 25; Bacteria - 4468; Metazoa - 12756; Fungi - 677; Plants - 48104; Viruses - 0; Other Eukaryotes - 4838 (source: NCBI BLink). & (p93194|rpk1_iponi : 140.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 95.5) no description available & (reliability: 862.0) & (original description: Putative lrr, Description = DNA-damage-repair/toleration protein DRT100, PFAM = PF13855;PF13855;PF08263)' T '28.2' 'DNA.repair' 'niben101scf02569_329728-337155' '(at1g12370 : 771.0) encodes an amino acid sequence with significant homology to the recently characterized type II photolyases. The uvr2-1 mutant is unable to remove CPDs in vivo, and plant extracts lack detectable photolyase activity , is sensitive to UV-B and is an allele; photolyase 1 (PHR1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101), DNA photolyase, class 2 (InterPro:IPR008148); Has 2452 Blast hits to 2448 proteins in 660 species: Archae - 33; Bacteria - 979; Metazoa - 129; Fungi - 60; Plants - 123; Viruses - 39; Other Eukaryotes - 1089 (source: NCBI BLink). & (gnl|cdd|35355 : 352.0) no description available & (gnl|cdd|86321 : 223.0) no description available & (reliability: 1542.0) & (original description: Putative PHR1, Description = Deoxyribodipyrimidine photo-lyase, PFAM = PF00875)' T '28.2' 'DNA.repair' 'niben101scf02693_93262-105371' '(at4g02070 : 1344.0) encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH6 bound the (+T) substrate strongly, (T/G) well, and (+AAG) no better than it did a (T/A) homoduplex.; MUTS homolog 6 (MSH6); FUNCTIONS IN: damaged DNA binding; INVOLVED IN: mismatch repair; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein Msh6 (InterPro:IPR017261), DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-homologue MSH6 (InterPro:IPR015536), Tudor domain (InterPro:IPR002999); BEST Arabidopsis thaliana protein match is: homolog of DNA mismatch repair protein MSH3 (TAIR:AT4G25540.1). & (gnl|cdd|35438 : 981.0) no description available & (gnl|cdd|30598 : 542.0) no description available & (q9xgc9|msh2_maize : 204.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 2688.0) & (original description: Putative MSH6, Description = DNA mismatch repair protein MSH6, PFAM = PF01624;PF05190;PF05192;PF05188;PF00488)' T '28.2' 'DNA.repair' 'niben101scf02804_29562-32323' '(at3g04880 : 397.0) encodes a novel protein involved in DNA repair from UV damage. Isolated by functional complementation of E. coli UV-sensitive mutants (UVR genes).; DNA-DAMAGE-REPAIR/TOLERATION 2 (DRT102); INVOLVED IN: response to UV, photoreactive repair, response to cold; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribose/galactose isomerase (InterPro:IPR003500), DNA-damage-repair/toleration protein, DRT102 (InterPro:IPR012100), Cupin 2, conserved barrel (InterPro:IPR013096), Cupin, RmlC-type (InterPro:IPR011051), RmlC-like jelly roll fold (InterPro:IPR014710); Has 4975 Blast hits to 4975 proteins in 1551 species: Archae - 4; Bacteria - 3564; Metazoa - 0; Fungi - 71; Plants - 32; Viruses - 0; Other Eukaryotes - 1304 (source: NCBI BLink). & (gnl|cdd|86006 : 127.0) no description available & (reliability: 794.0) & (original description: Putative DRT102, Description = DNA-damage-repair/toleration protein DRT102, PFAM = PF07883;PF02502)' T '28.2' 'DNA.repair' 'niben101scf02854_915539-929508' '(at5g16630 : 707.0) RAD4; FUNCTIONS IN: damaged DNA binding; INVOLVED IN: nucleotide-excision repair; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transglutaminase-like (InterPro:IPR002931), DNA repair protein Rad4, DNA-binding domain 1 (InterPro:IPR018326), DNA repair protein Rad4, DNA-binding domain 3 (InterPro:IPR018328), DNA repair protein Rad4, DNA-binding domain 2 (InterPro:IPR018327), DNA repair protein Rad4, transglutaminase-like domain (InterPro:IPR018325), DNA repair protein Rad4 (InterPro:IPR004583); Has 662 Blast hits to 576 proteins in 184 species: Archae - 0; Bacteria - 0; Metazoa - 224; Fungi - 265; Plants - 79; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|37390 : 345.0) no description available & (gnl|cdd|67450 : 268.0) no description available & (reliability: 1414.0) & (original description: Putative RAD4, Description = DNA repair protein RAD4, PFAM = PF10403;PF10405;PF03835;PF01841;PF10404)' T '28.2' 'DNA.repair' 'niben101scf02870_69058-76409' '(at3g07930 : 259.0) DNA glycosylase superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), HhH-GPD domain (InterPro:IPR003265); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 518.0) & (original description: Putative Mbd4, Description = Methyl-CpG-binding domain protein 4, PFAM = )' T '28.2' 'DNA.repair' 'niben101scf03110_627292-635013' '(at1g75090 : 279.0) DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT5G57970.2); Has 3694 Blast hits to 3694 proteins in 1578 species: Archae - 10; Bacteria - 3185; Metazoa - 5; Fungi - 2; Plants - 164; Viruses - 0; Other Eukaryotes - 328 (source: NCBI BLink). & (gnl|cdd|86301 : 234.0) no description available & (reliability: 558.0) & (original description: Putative tag, Description = DNA-3-methyladenine glycosylase 1, PFAM = PF03352)' T '28.2' 'DNA.repair' 'niben101scf03166_26769-33102' '(at5g57970 : 341.0) DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G80850.1); Has 3809 Blast hits to 3727 proteins in 1589 species: Archae - 10; Bacteria - 3189; Metazoa - 57; Fungi - 9; Plants - 164; Viruses - 0; Other Eukaryotes - 380 (source: NCBI BLink). & (gnl|cdd|86301 : 247.0) no description available & (reliability: 682.0) & (original description: Putative tag, Description = 3-methyl-adenine DNA glycosylase I, constitutive, PFAM = PF03352)' T '28.2' 'DNA.repair' 'niben101scf03224_110555-117443' '(at1g79650 : 438.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23B (RAD23B); FUNCTIONS IN: damaged DNA binding, ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, base-excision repair, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT1G16190.1). & (gnl|cdd|35235 : 359.0) no description available & (q40742|rad23_orysa : 292.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (gnl|cdd|29207 : 99.5) no description available & (reliability: 876.0) & (original description: Putative HR23, Description = Putative DNA repair protein RAD23-1, PFAM = PF00240;PF09280;PF00627;PF00627)' T '28.2' 'DNA.repair' 'niben101scf03306_179079-187033' '(at4g31340 : 241.0) myosin heavy chain-related; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: DNA repair ATPase-related (TAIR:AT2G24420.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative Os08g0519400, Description = Os08g0519400 protein, PFAM = )' T '28.2' 'DNA.repair' 'niben101scf03561_207683-225097' '(at1g52500 : 379.0) Encodes one of the splice variants of Arabidopsis thaliana MutM homolog. Encodes a formamidopyrimidine-DNA glycosylase that has abasic lyase activity and is able to nick double- stranded oligonucleotides containing 8-oxo-7,8-dihydroguanine (8-oxoG) in vitro.; MUTM homolog-1 (MMH-1); CONTAINS InterPro DOMAIN/s: Ribosomal protein S13-like, H2TH (InterPro:IPR010979), DNA glycosylase/AP lyase, H2TH DNA-binding (InterPro:IPR015886), DNA glycosylase/AP lyase, catalytic domain (InterPro:IPR012319), DNA glycosylase/AP lyase (InterPro:IPR000191); Has 11102 Blast hits to 10156 proteins in 2240 species: Archae - 10; Bacteria - 5065; Metazoa - 1812; Fungi - 570; Plants - 321; Viruses - 42; Other Eukaryotes - 3282 (source: NCBI BLink). & (gnl|cdd|80823 : 175.0) no description available & (reliability: 758.0) & (original description: Putative Os06g0643600, Description = Os06g0643600 protein, PFAM = PF06831;PF01149)' T '28.2' 'DNA.repair' 'niben101scf03674_215450-228635' '(at1g19485 : 566.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: A.T hook-like (InterPro:IPR020478), AT hook, DNA-binding motif (InterPro:IPR017956), WD40 repeat (InterPro:IPR001680), HMG-I/HMG-Y, DNA-binding, conserved site (InterPro:IPR000637), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781). & (reliability: 1132.0) & (original description: Putative At1g19485, Description = Transducin/WD-40 repeat-containing protein, PFAM = )' T '28.2' 'DNA.repair' 'niben101scf03689_95205-108669' '(at4g35520 : 310.0) DNA mismatch repair protein similar to MutL. Required for normal levels of meiotic crossovers; MUTL protein homolog 3 (MLH3); FUNCTIONS IN: mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, reciprocal meiotic recombination; LOCATED IN: chromosome; EXPRESSED IN: inflorescence; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein, N-terminal (InterPro:IPR014763), MutL, C-terminal, dimerisation (InterPro:IPR014790), DNA mismatch repair protein (InterPro:IPR002099), DNA mismatch repair, conserved site (InterPro:IPR014762), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: DNA mismatch repair protein, putative (TAIR:AT4G02460.1); Has 8909 Blast hits to 6784 proteins in 2360 species: Archae - 138; Bacteria - 6148; Metazoa - 581; Fungi - 681; Plants - 158; Viruses - 0; Other Eukaryotes - 1203 (source: NCBI BLink). & (gnl|cdd|37188 : 260.0) no description available & (gnl|cdd|30671 : 207.0) no description available & (reliability: 620.0) & (original description: Putative v1g88316, Description = Predicted protein, PFAM = PF13589;PF01119)' T '28.2' 'DNA.repair' 'niben101scf03766_1724920-1736795' '(at3g28030 : 821.0) Required for repair of pyrimidine-pyrimidinone (6-4) dimers.; ULTRAVIOLET HYPERSENSITIVE 3 (UVH3); FUNCTIONS IN: protein binding, nuclease activity; INVOLVED IN: DNA repair, response to UV-B, response to heat, non-photoreactive DNA repair; LOCATED IN: nucleus; EXPRESSED IN: stem, leaf whorl, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: XPG conserved site (InterPro:IPR019974), Xeroderma pigmentosum group G protein (InterPro:IPR001044), XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G01880.1); Has 8115 Blast hits to 5779 proteins in 624 species: Archae - 528; Bacteria - 414; Metazoa - 2441; Fungi - 1496; Plants - 576; Viruses - 71; Other Eukaryotes - 2589 (source: NCBI BLink). & (gnl|cdd|37731 : 254.0) no description available & (gnl|cdd|29030 : 181.0) no description available & (reliability: 1642.0) & (original description: Putative xpg, Description = DNA repair protein complementing XP-G cells, PFAM = PF00867;PF00752)' T '28.2' 'DNA.repair' 'niben101scf04113_1420569-1423567' '(at1g19480 : 314.0) DNA glycosylase superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G75230.1); Has 4597 Blast hits to 4597 proteins in 1093 species: Archae - 62; Bacteria - 2351; Metazoa - 1; Fungi - 142; Plants - 80; Viruses - 0; Other Eukaryotes - 1961 (source: NCBI BLink). & (gnl|cdd|37129 : 263.0) no description available & (gnl|cdd|30471 : 177.0) no description available & (reliability: 628.0) & (original description: Putative glysoja_023078, Description = Putative DNA-3-methyladenine glycosylase yfjP, PFAM = PF00730)' T '28.2' 'DNA.repair' 'niben101scf04183_45743-50330' '(at1g27410 : 456.0) DNA repair metallo-beta-lactamase family protein; CONTAINS InterPro DOMAIN/s: DNA repair metallo-beta-lactamase (InterPro:IPR011084); BEST Arabidopsis thaliana protein match is: sterile alpha motif (SAM) domain-containing protein (TAIR:AT2G45700.1); Has 810 Blast hits to 798 proteins in 218 species: Archae - 6; Bacteria - 54; Metazoa - 272; Fungi - 214; Plants - 166; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (gnl|cdd|36575 : 234.0) no description available & (gnl|cdd|87294 : 80.0) no description available & (reliability: 912.0) & (original description: Putative Sb03g036570, Description = Putative uncharacterized protein Sb03g036570, PFAM = PF07522)' T '28.2' 'DNA.repair' 'niben101scf04194_22214-33772' '(at5g64420 : 1127.0) DNA polymerase V family; FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding; INVOLVED IN: DNA replication, transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase V (InterPro:IPR007015); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37137 : 426.0) no description available & (gnl|cdd|68503 : 398.0) no description available & (reliability: 2254.0) & (original description: Putative At5g64420, Description = DNA polymerase phi subunit, PFAM = PF04931)' T '28.2' 'DNA.repair' 'niben101scf04198_437447-470503' '(at5g04130 : 1049.0) DNA GYRASE B2; FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, ATP binding; INVOLVED IN: DNA topological change, DNA metabolic process; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA topoisomerase, type IIA, subunit B, domain 2 (InterPro:IPR013506), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA topoisomerase, type IIA, subunit B (InterPro:IPR000565), DNA topoisomerase, type IIA, subunit B/N-terminal (InterPro:IPR001241); BEST Arabidopsis thaliana protein match is: DNA GYRASE B1 (TAIR:AT3G10270.1); Has 25944 Blast hits to 25881 proteins in 6578 species: Archae - 105; Bacteria - 19082; Metazoa - 171; Fungi - 228; Plants - 112; Viruses - 77; Other Eukaryotes - 6169 (source: NCBI BLink). & (q5nbj3|gyrb_orysa : 1020.0) DNA gyrase subunit B, chloroplast/mitochondrial precursor (EC 5.99.1.3) - Oryza sativa (Rice) & (gnl|cdd|81676 : 943.0) no description available & (gnl|cdd|35576 : 594.0) no description available & (reliability: 2074.0) & (original description: Putative GYRB, Description = DNA gyrase subunit B, chloroplastic/mitochondrial, PFAM = PF02518;PF00986;PF01751;PF00204)' T '28.2' 'DNA.repair' 'niben101scf04417_83824-89209' '(at1g79650 : 421.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23B (RAD23B); FUNCTIONS IN: damaged DNA binding, ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, base-excision repair, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT1G16190.1). & (gnl|cdd|35235 : 371.0) no description available & (q40742|rad23_orysa : 293.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (gnl|cdd|29207 : 107.0) no description available & (reliability: 842.0) & (original description: Putative RAD23B, Description = Ubiquitin receptor RAD23b, PFAM = PF09280;PF00627;PF00627;PF00240)' T '28.2' 'DNA.repair' 'niben101scf04424_919200-928126' '(at1g80420 : 278.0) ATXRCC1; FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: DNA repair; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357). & (gnl|cdd|38436 : 157.0) no description available & (reliability: 556.0) & (original description: Putative XRCC1, Description = DNA-repair protein XRCC1, PFAM = PF00533)' T '28.2' 'DNA.repair' 'niben101scf04765_40249-46809' '(at1g65070 : 854.0) DNA mismatch repair protein MutS, type 2; FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, maintenance of fidelity involved in DNA-dependent DNA replication; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, type 2 (InterPro:IPR005747), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: DNA mismatch repair protein MutS, type 2 (TAIR:AT5G54090.1). & (gnl|cdd|80654 : 474.0) no description available & (gnl|cdd|35440 : 100.0) no description available & (reliability: 1708.0) & (original description: Putative BnaC02g16350D, Description = BnaC02g16350D protein, PFAM = PF01713;PF00488)' T '28.2' 'DNA.repair' 'niben101scf04869_526805-543268' '(at5g64520 : 243.0) Encodes a protein of the XRCC2 family involved in DNA repair. atxrcc2-1 Mutants are sensitive to MitomycinC but do not show fertility defects.; homolog of X-ray repair cross complementing 2 (XRCC2) (XRCC2); Has 186 Blast hits to 186 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 44; Plants - 31; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|38070 : 203.0) no description available & (reliability: 486.0) & (original description: Putative XRCC2, Description = DNA repair protein XRCC2-like protein, PFAM = )' T '28.2' 'DNA.repair' 'niben101scf04998_88295-107752' '(at3g02540 : 422.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23C (RAD23C); FUNCTIONS IN: ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT5G38470.1). & (gnl|cdd|35235 : 369.0) no description available & (q40742|rad23_orysa : 350.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (gnl|cdd|29207 : 111.0) no description available & (reliability: 810.0) & (original description: Putative RAD1, Description = Putative DNA repair protein, PFAM = PF00240;PF00627;PF00627;PF09280)' T '28.2' 'DNA.repair' 'niben101scf05004_119307-130750' '(at4g31150 : 270.0) endonuclease V family protein; FUNCTIONS IN: endonuclease activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease V (InterPro:IPR007581); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39618 : 214.0) no description available & (gnl|cdd|68078 : 170.0) no description available & (reliability: 540.0) & (original description: Putative endov, Description = Endonuclease V, PFAM = PF04493)' T '28.2' 'DNA.repair' 'niben101scf05123_57956-70259' '(at5g04560 : 541.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 101.0) no description available & (reliability: 1070.0) & (original description: Putative pg3, Description = Protein ROS1, PFAM = PF15628)' T '28.2' 'DNA.repair' 'niben101scf05124_8336-33601' '(at5g50340 : 634.0) ATP-dependent peptidases;nucleotide binding;serine-type endopeptidases;DNA helicases;ATP binding;damaged DNA binding;nucleoside-triphosphatases; FUNCTIONS IN: in 7 functions; INVOLVED IN: DNA repair, proteolysis, DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, Lon C-terminal (InterPro:IPR008269), ATPase, AAA+ type, core (InterPro:IPR003593), DNA repair protein RadA (InterPro:IPR004504), DNA helicase, DnaB-like, C-terminal (InterPro:IPR007694), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); Has 8098 Blast hits to 8084 proteins in 2420 species: Archae - 172; Bacteria - 6133; Metazoa - 8; Fungi - 0; Plants - 82; Viruses - 9; Other Eukaryotes - 1694 (source: NCBI BLink). & (gnl|cdd|83993 : 520.0) no description available & (reliability: 1268.0) & (original description: Putative sms, Description = DNA repair protein RadA, PFAM = PF13541;PF13481)' T '28.2' 'DNA.repair' 'niben101scf05140_272049-297978' '(at3g19210 : 1244.0) Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases. Functions in DNA repair via homologous recombination.; homolog of RAD54 (RAD54); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: DNA repair, response to gamma radiation, double-strand break repair via homologous recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: style (sensu Poaceae), hydathode, root, petiole; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: switch 2 (TAIR:AT1G03750.1). & (gnl|cdd|35611 : 534.0) no description available & (gnl|cdd|30899 : 271.0) no description available & (q7g8y3|isw2_orysa : 201.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2488.0) & (original description: Putative CHR25, Description = Protein CHROMATIN REMODELING 25, PFAM = PF00176;PF00271)' T '28.2' 'DNA.repair' 'niben101scf05157_500802-509436' '(at2g28560 : 372.0) Encodes a protein of the RAD51B family involved in double stranded DNA repair. Homozygous mutant plants show increased sensitivity to mitomycin which induces DS breaks.; RAD51B; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis thaliana protein match is: homolog of RAD51 D (TAIR:AT1G07745.2); Has 2570 Blast hits to 2570 proteins in 515 species: Archae - 541; Bacteria - 205; Metazoa - 686; Fungi - 429; Plants - 272; Viruses - 16; Other Eukaryotes - 421 (source: NCBI BLink). & (gnl|cdd|36646 : 139.0) no description available & (gnl|cdd|30003 : 134.0) no description available & (reliability: 744.0) & (original description: Putative RAD51B, Description = AtRAD51B, PFAM = PF08423)' T '28.2' 'DNA.repair' 'niben101scf05222_638673-677785' '(at5g54260 : 952.0) DNA repair and meiotic recombination protein, component of MRE11 complex with RAD50 and NBS1; MEIOTIC RECOMBINATION 11 (MRE11); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, exonuclease activity, endonuclease activity; INVOLVED IN: double-strand break repair, DNA metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), DNA repair exonuclease (InterPro:IPR003701), Mre11, DNA-binding (InterPro:IPR007281); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37521 : 686.0) no description available & (gnl|cdd|67753 : 232.0) no description available & (reliability: 1904.0) & (original description: Putative MRE11, Description = Double-strand break repair protein MRE11, PFAM = PF00149;PF04152)' T '28.2' 'DNA.repair' 'niben101scf05222_650334-678071' '(at5g54260 : 942.0) DNA repair and meiotic recombination protein, component of MRE11 complex with RAD50 and NBS1; MEIOTIC RECOMBINATION 11 (MRE11); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, exonuclease activity, endonuclease activity; INVOLVED IN: double-strand break repair, DNA metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), DNA repair exonuclease (InterPro:IPR003701), Mre11, DNA-binding (InterPro:IPR007281); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37521 : 688.0) no description available & (gnl|cdd|67753 : 235.0) no description available & (reliability: 1884.0) & (original description: Putative MRE11A, Description = Double-strand break repair protein MRE11A, PFAM = PF04152;PF00149)' T '28.2' 'DNA.repair' 'niben101scf05283_59726-73296' '(at1g30480 : 323.0) recombination and DNA-damage resistance protein (DRT111); DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 111 (DRT111); FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: DNA repair; LOCATED IN: chloroplast, nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), D111/G-patch (InterPro:IPR000467), Splicing factor, SPF45 (InterPro:IPR016967); Has 6802 Blast hits to 5609 proteins in 466 species: Archae - 14; Bacteria - 357; Metazoa - 3361; Fungi - 1024; Plants - 621; Viruses - 38; Other Eukaryotes - 1387 (source: NCBI BLink). & (gnl|cdd|37207 : 284.0) no description available & (reliability: 646.0) & (original description: Putative DRT111, Description = DNA-damage-repair/toleration protein DRT111, chloroplastic, PFAM = PF01585)' T '28.2' 'DNA.repair' 'niben101scf05998_363458-367671' '(at4g09140 : 976.0) Encodes a protein with similarity to Mut1 DNA mismatch repair protein, from E.coli. The protein is expressed during prophase I of meiosis, colocalizes with MLH3 throughout pachytene and is dependent on MLH3 for proper localization.; MUTL-homologue 1 (MLH1); FUNCTIONS IN: protein binding, bridging; INVOLVED IN: in 6 processes; LOCATED IN: nuclear chromatin; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein Mlh1 (InterPro:IPR011186), DNA mismatch repair, conserved site (InterPro:IPR014762), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA mismatch repair protein, C-terminal (InterPro:IPR013507), DNA mismatch repair protein, N-terminal (InterPro:IPR014763), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA mismatch repair protein (InterPro:IPR002099), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: DNA mismatch repair protein, putative (TAIR:AT4G02460.1); Has 6802 Blast hits to 6727 proteins in 2342 species: Archae - 68; Bacteria - 4480; Metazoa - 469; Fungi - 496; Plants - 114; Viruses - 0; Other Eukaryotes - 1175 (source: NCBI BLink). & (gnl|cdd|37190 : 764.0) no description available & (gnl|cdd|30671 : 368.0) no description available & (reliability: 1952.0) & (original description: Putative MLH1, Description = DNA mismatch repair protein MLH1, PFAM = PF13589;PF16413;PF01119)' T '28.2' 'DNA.repair' 'niben101scf06077_9727-26563' '(at4g35520 : 402.0) DNA mismatch repair protein similar to MutL. Required for normal levels of meiotic crossovers; MUTL protein homolog 3 (MLH3); FUNCTIONS IN: mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, reciprocal meiotic recombination; LOCATED IN: chromosome; EXPRESSED IN: inflorescence; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein, N-terminal (InterPro:IPR014763), MutL, C-terminal, dimerisation (InterPro:IPR014790), DNA mismatch repair protein (InterPro:IPR002099), DNA mismatch repair, conserved site (InterPro:IPR014762), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: DNA mismatch repair protein, putative (TAIR:AT4G02460.1); Has 8909 Blast hits to 6784 proteins in 2360 species: Archae - 138; Bacteria - 6148; Metazoa - 581; Fungi - 681; Plants - 158; Viruses - 0; Other Eukaryotes - 1203 (source: NCBI BLink). & (gnl|cdd|37188 : 282.0) no description available & (gnl|cdd|30671 : 214.0) no description available & (reliability: 804.0) & (original description: Putative v1g88316, Description = Predicted protein, PFAM = PF08676;PF01119;PF13589)' T '28.2' 'DNA.repair' 'niben101scf06091_421427-429894' '(at5g57970 : 320.0) DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G80850.1); Has 3809 Blast hits to 3727 proteins in 1589 species: Archae - 10; Bacteria - 3189; Metazoa - 57; Fungi - 9; Plants - 164; Viruses - 0; Other Eukaryotes - 380 (source: NCBI BLink). & (gnl|cdd|86301 : 251.0) no description available & (reliability: 640.0) & (original description: Putative tag, Description = Putative GMP synthase [glutamine-hydrolyzing], PFAM = PF03352)' T '28.2' 'DNA.repair' 'niben101scf06236_47108-52501' '(at2g45280 : 443.0) Encodes a protein similar to RAD51C involved in double stranded break repair via homologous recombination. Sensitive to DSB induced by Mitomycin C and gamma irradiation, interacts with Atxrcc3 in yeast two-hybrid assay. Required for female meiosis but not critical for mitosis under normal conditions.; RAS associated with diabetes protein 51C (RAD51C); CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), DNA recombination and repair protein, RecA-like (InterPro:IPR016467), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis thaliana protein match is: DNA repair (Rad51) family protein (TAIR:AT3G22880.1). & (gnl|cdd|36647 : 325.0) no description available & (gnl|cdd|29989 : 252.0) no description available & (q96449|dmc1_soybn : 100.0) Meiotic recombination protein DMC1 homolog - Glycine max (Soybean) & (reliability: 886.0) & (original description: Putative RAD51C, Description = DNA repair protein RAD51 homolog 3, PFAM = PF08423)' T '28.2' 'DNA.repair' 'niben101scf06348_67076-74713' '(at1g01880 : 595.0) 5'-3' exonuclease family protein; FUNCTIONS IN: DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: single-stranded DNA endonuclease family protein (TAIR:AT3G48900.2). & (gnl|cdd|37730 : 203.0) no description available & (gnl|cdd|29030 : 185.0) no description available & (reliability: 1190.0) & (original description: Putative GEN1, Description = Flap endonuclease GEN-like 1, PFAM = PF00867;PF00752)' T '28.2' 'DNA.repair' 'niben101scf06736_233480-237380' '(at5g44680 : 380.0) DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT3G12710.1); Has 3656 Blast hits to 3656 proteins in 1559 species: Archae - 10; Bacteria - 3140; Metazoa - 4; Fungi - 4; Plants - 168; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (gnl|cdd|86301 : 231.0) no description available & (reliability: 760.0) & (original description: Putative tag, Description = 3-methyladenine-DNA glycosylase I, PFAM = PF03352)' T '28.2' 'DNA.repair' 'niben101scf07035_808700-818218' '(at3g23100 : 209.0) A. thaliana homologue of the human DNA ligase IV-binding protein XRCC4. Yeast two-hybrid analysis demonstrated a strong interaction between A. thaliana DNA ligase IV and the A. thaliana homologue of the human DNA ligase IV-binding protein XRCC4. This interaction is shown to be mediated via the tandem BRCA C-terminal domains of A. thaliana DNA ligase IV protein.; homolog of human DNA ligase iv-binding protein XRCC4 (XRCC4); FUNCTIONS IN: protein C-terminus binding; INVOLVED IN: double-strand break repair, DNA recombination, metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), DNA double-strand break repair and VJ recombination XRCC4, C-terminal (InterPro:IPR014751), DNA double-strand break repair and VJ recombination XRCC4 (InterPro:IPR010585); BEST Arabidopsis thaliana protein match is: DNA double-strand break repair and VJ recombination XRCC4 (TAIR:AT1G61410.1); Has 189 Blast hits to 182 proteins in 54 species: Archae - 0; Bacteria - 3; Metazoa - 88; Fungi - 4; Plants - 48; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (reliability: 418.0) & (original description: Putative XRCC4, Description = DNA repair protein XRCC4, PFAM = PF06632)' T '28.2' 'DNA.repair' 'niben101scf07161_22096-63198' '(at2g31970 : 1490.0) Encodes the Arabidopsis RAD50 homologue. It is involved in double strand break repair. Component of the meiotic recombination complex that processes meiotic double-strand-breaks to produce single-stranded DNA ends, which act in the homology search and recombination. Accumulates in the nucleus during meiotic prophase, a process regulated by PHS1.; RAD50; FUNCTIONS IN: zinc ion binding, ATP binding, nuclease activity; INVOLVED IN: DNA repair, double-strand break repair, telomere capping, mitotic recombination, telomere maintenance; LOCATED IN: nucleus, Mre11 complex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc hook, Rad50 (InterPro:IPR013134), Rad50 zinc hook (InterPro:IPR007517), Recombination/repair protein Rad50 (InterPro:IPR004584); Has 105617 Blast hits to 56308 proteins in 2913 species: Archae - 1820; Bacteria - 19240; Metazoa - 45759; Fungi - 8381; Plants - 4805; Viruses - 470; Other Eukaryotes - 25142 (source: NCBI BLink). & (gnl|cdd|36180 : 942.0) no description available & (gnl|cdd|72999 : 138.0) no description available & (reliability: 2980.0) & (original description: Putative RAD50, Description = DNA repair protein RAD50, PFAM = PF04423;PF13476)' T '28.2' 'DNA.repair' 'niben101scf07287_152925-156006' '(at1g19480 : 325.0) DNA glycosylase superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G75230.1); Has 4597 Blast hits to 4597 proteins in 1093 species: Archae - 62; Bacteria - 2351; Metazoa - 1; Fungi - 142; Plants - 80; Viruses - 0; Other Eukaryotes - 1961 (source: NCBI BLink). & (gnl|cdd|37129 : 259.0) no description available & (gnl|cdd|30471 : 159.0) no description available & (reliability: 650.0) & (original description: Putative BnaA06g13680D, Description = BnaA06g13680D protein, PFAM = PF00730)' T '28.2' 'DNA.repair' 'niben101scf07368_32970-45249' '(at2g36490 : 620.0) A repressor of transcriptional gene silencing. Functions by demethylating the target promoter DNA. Interacts physically with RPA2/ROR1. In the ros1 mutants, an increase in methylation is observed in a number of gene promoters. Among the loci affected by ros1, a few (RD29A and At1g76930) are affected in cytosine methylation in all sequence contexts (CpG, CpNpG or CpNpN), although many others are affected primarily in non-CpG contexts.; demeter-like 1 (DML1); FUNCTIONS IN: protein binding, DNA N-glycosylase activity, DNA-(apurinic or apyrimidinic site) lyase activity; INVOLVED IN: DNA repair, chromatin silencing, negative regulation of chromatin silencing, DNA methylation, DNA demethylation; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: HhH-GPD base excision DNA repair family protein (TAIR:AT5G04560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1240.0) & (original description: Putative NtROS3, Description = Repressor of silencing 3, PFAM = PF15628;PF15629)' T '28.2' 'DNA.repair' 'niben101scf07368_34435-89874' '(at2g36490 : 474.0) A repressor of transcriptional gene silencing. Functions by demethylating the target promoter DNA. Interacts physically with RPA2/ROR1. In the ros1 mutants, an increase in methylation is observed in a number of gene promoters. Among the loci affected by ros1, a few (RD29A and At1g76930) are affected in cytosine methylation in all sequence contexts (CpG, CpNpG or CpNpN), although many others are affected primarily in non-CpG contexts.; demeter-like 1 (DML1); FUNCTIONS IN: protein binding, DNA N-glycosylase activity, DNA-(apurinic or apyrimidinic site) lyase activity; INVOLVED IN: DNA repair, chromatin silencing, negative regulation of chromatin silencing, DNA methylation, DNA demethylation; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: HhH-GPD base excision DNA repair family protein (TAIR:AT5G04560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30526 : 98.7) no description available & (reliability: 948.0) & (original description: Putative pg3, Description = Transcriptional activator DEMETER, PFAM = )' T '28.2' 'DNA.repair' 'niben101scf07577_24638-46705' '(at2g28560 : 461.0) Encodes a protein of the RAD51B family involved in double stranded DNA repair. Homozygous mutant plants show increased sensitivity to mitomycin which induces DS breaks.; RAD51B; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis thaliana protein match is: homolog of RAD51 D (TAIR:AT1G07745.2); Has 2570 Blast hits to 2570 proteins in 515 species: Archae - 541; Bacteria - 205; Metazoa - 686; Fungi - 429; Plants - 272; Viruses - 16; Other Eukaryotes - 421 (source: NCBI BLink). & (gnl|cdd|36646 : 165.0) no description available & (gnl|cdd|29989 : 161.0) no description available & (reliability: 922.0) & (original description: Putative RAD51B, Description = DNA repair protein RAD51 homolog 2, PFAM = PF08423)' T '28.2' 'DNA.repair' 'niben101scf07680_185814-193391' '(q9xed7|r51a2_maize : 589.0) DNA repair protein RAD51 homolog B (Rad51-like protein B) (RAD51B) (ZmRAD51b) - Zea mays (Maize) & (at5g20850 : 585.0) Encodes a homolog of yeast RAD51. Its mRNA is most abundant in early flower buds and is expressed at high levels in exponentially growing cells in suspension cultures and is induced in response to gamma radiation.; RAS associated with diabetes protein 51 (RAD51); FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, double-strand break repair, response to gamma radiation, response to radiation, DNA metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), DNA repair Rad51/transcription factor NusA, alpha-helical (InterPro:IPR010995), DNA recombination and repair protein, RecA-like (InterPro:IPR016467), DNA recombination/repair protein Rad51 (InterPro:IPR011941), Helix-hairpin-helix DNA-binding motif, class 1 (InterPro:IPR003583), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632), DNA recombination/repair protein RecA, monomer-monomer interface (InterPro:IPR020587); BEST Arabidopsis thaliana protein match is: DNA repair (Rad51) family protein (TAIR:AT3G22880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71852 : 465.0) no description available & (gnl|cdd|36646 : 342.0) no description available & (reliability: 1170.0) & (original description: Putative RAD51, Description = DNA repair protein RAD51 homolog, PFAM = PF14520;PF08423)' T '28.2' 'DNA.repair' 'niben101scf08305_91497-104134' '(at5g04560 : 659.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 89.9) no description available & (reliability: 1246.0) & (original description: Putative DME, Description = Protein ROS1, PFAM = PF15628;PF15629)' T '28.2' 'DNA.repair' 'niben101scf08465_207852-219544' '(at5g16630 : 717.0) RAD4; FUNCTIONS IN: damaged DNA binding; INVOLVED IN: nucleotide-excision repair; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transglutaminase-like (InterPro:IPR002931), DNA repair protein Rad4, DNA-binding domain 1 (InterPro:IPR018326), DNA repair protein Rad4, DNA-binding domain 3 (InterPro:IPR018328), DNA repair protein Rad4, DNA-binding domain 2 (InterPro:IPR018327), DNA repair protein Rad4, transglutaminase-like domain (InterPro:IPR018325), DNA repair protein Rad4 (InterPro:IPR004583); Has 662 Blast hits to 576 proteins in 184 species: Archae - 0; Bacteria - 0; Metazoa - 224; Fungi - 265; Plants - 79; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|37390 : 354.0) no description available & (gnl|cdd|67450 : 265.0) no description available & (reliability: 1434.0) & (original description: Putative RAD4, Description = DNA repair protein RAD4, PFAM = PF01841;PF10403;PF10404;PF03835;PF10405)' T '28.2' 'DNA.repair' 'niben101scf08533_80577-94235' '(at5g04560 : 555.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (reliability: 1074.0) & (original description: Putative DME, Description = Protein ROS1, PFAM = PF15628)' T '28.2' 'DNA.repair' 'niben101scf08533_81625-97522' '(at5g04560 : 549.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (reliability: 1062.0) & (original description: Putative DME, Description = Protein ROS1, PFAM = PF15628)' T '28.2' 'DNA.repair' 'niben101scf08635_306848-317566' '(at3g20475 : 174.0) Encodes MSH5, a homologue of the MutS-homolog family of genes required for normal levels of recombination in budding yeast, mouse and Caenorhabditis elegans. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers. Transcripts of AtMSH5 are specific to reproductive tissues and expression of the protein is abundant during prophase I of meiosis. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers.; MUTS-homologue 5 (MSH5); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, chiasma assembly, reciprocal meiotic recombination; LOCATED IN: condensed nuclear chromosome; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, IL.00 inflorescence just visible; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432); BEST Arabidopsis thaliana protein match is: MUTS homolog 2 (TAIR:AT3G18524.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative MSH5, Description = DNA mismatch repair protein MSH5, PFAM = )' T '28.2' 'DNA.repair' 'niben101scf08685_65545-80025' '(at4g17380 : 1231.0) Encodes the Arabidopsis homolog of MSH4, a meiosis-specific member of the MutS-homolog family of genes. It is expressed only in floral tissues and only during early meiotic prophase I, preceding the synapsis of homologous chromosomes. It is involved in the early steps of recombination.; MUTS-like protein 4 (MSH4); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, synapsis, meiotic prophase I; LOCATED IN: condensed nuclear chromosome; EXPRESSED IN: flower, sporocyte; EXPRESSED DURING: petal differentiation and expansion stage, IL.00 inflorescence just visible; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS, core (InterPro:IPR007696); BEST Arabidopsis thaliana protein match is: MUTS homolog 2 (TAIR:AT3G18524.1); Has 13303 Blast hits to 13154 proteins in 2712 species: Archae - 169; Bacteria - 9120; Metazoa - 661; Fungi - 837; Plants - 451; Viruses - 3; Other Eukaryotes - 2062 (source: NCBI BLink). & (gnl|cdd|35441 : 600.0) no description available & (gnl|cdd|81564 : 370.0) no description available & (q9xgc9|msh2_maize : 151.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 2462.0) & (original description: Putative MSH4, Description = DNA mismatch repair protein MSH4, PFAM = PF05192;PF05190;PF00488)' T '28.2' 'DNA.repair' 'niben101scf08812_114598-352383' '(at5g41370 : 301.0) Encodes XPB1, a DNA repair protein and transcription factor. Arabidopsis thaliana has duplicated XPB gene (AtXPB1 and AtXPB2, with high similarity to each other). XPB proteins are involved in both DNA repair and transcription, they are component of the transcription factor IIH (TFIIH) and are responsible for DNA helicase activity during nucleotide (nt) excision repair (NER). Complementation assays in yeast rad25 mutant strains suggest the involvement of AtXPB2 in DNA repair. Although both genes are expressed in a constitutive manner during the plant life cycle, Northern blot analyses suggest that light modulates the expression level of both XPB copies.; homolog of xeroderma pigmentosum complementation group B 1 (XPB1); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to UV, response to toxin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: whole plant, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001), Xeroderma pigmentosum group B protein (XP-B) (InterPro:IPR001161), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: homolog of Xeroderma pigmentosum complementation group B 2 (TAIR:AT5G41360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36339 : 243.0) no description available & (reliability: 602.0) & (original description: Putative hay, Description = TFIIH basal transcription factor complex helicase XPB subunit, PFAM = PF13625)' T '28.2' 'DNA.repair' 'niben101scf08812_114703-118035' '(at5g41370 : 108.0) Encodes XPB1, a DNA repair protein and transcription factor. Arabidopsis thaliana has duplicated XPB gene (AtXPB1 and AtXPB2, with high similarity to each other). XPB proteins are involved in both DNA repair and transcription, they are component of the transcription factor IIH (TFIIH) and are responsible for DNA helicase activity during nucleotide (nt) excision repair (NER). Complementation assays in yeast rad25 mutant strains suggest the involvement of AtXPB2 in DNA repair. Although both genes are expressed in a constitutive manner during the plant life cycle, Northern blot analyses suggest that light modulates the expression level of both XPB copies.; homolog of xeroderma pigmentosum complementation group B 1 (XPB1); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to UV, response to toxin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: whole plant, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001), Xeroderma pigmentosum group B protein (XP-B) (InterPro:IPR001161), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: homolog of Xeroderma pigmentosum complementation group B 2 (TAIR:AT5G41360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36339 : 100.0) no description available & (reliability: 216.0) & (original description: Putative hay, Description = DNA repair helicase rad25, PFAM = PF13625)' T '28.2' 'DNA.repair' 'niben101scf09014_212210-227287' '(at5g54260 : 953.0) DNA repair and meiotic recombination protein, component of MRE11 complex with RAD50 and NBS1; MEIOTIC RECOMBINATION 11 (MRE11); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, exonuclease activity, endonuclease activity; INVOLVED IN: double-strand break repair, DNA metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), DNA repair exonuclease (InterPro:IPR003701), Mre11, DNA-binding (InterPro:IPR007281); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37521 : 682.0) no description available & (gnl|cdd|67753 : 228.0) no description available & (reliability: 1906.0) & (original description: Putative MRE11, Description = Double-strand break repair protein MRE11, PFAM = PF00149;PF04152)' T '28.2' 'DNA.repair' 'niben101scf09133_341845-346002' '(at3g12040 : 155.0) DNA-3-methyladenine glycosylase (MAG); FUNCTIONS IN: DNA binding, alkylbase DNA N-glycosylase activity, catalytic activity; INVOLVED IN: base-excision repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Methylpurine-DNA glycosylase (MPG) (InterPro:IPR003180), Formyl transferase, C-terminal-like (InterPro:IPR011034); Has 2384 Blast hits to 2384 proteins in 1044 species: Archae - 26; Bacteria - 1995; Metazoa - 85; Fungi - 6; Plants - 30; Viruses - 0; Other Eukaryotes - 242 (source: NCBI BLink). & (gnl|cdd|39686 : 117.0) no description available & (gnl|cdd|65976 : 91.9) no description available & (reliability: 310.0) & (original description: Putative MAG, Description = DNA-3-methyladenine glycosylase, PFAM = PF02245)' T '28.2' 'DNA.repair' 'niben101scf09372_79342-89932' '(at3g02540 : 441.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23C (RAD23C); FUNCTIONS IN: ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT5G38470.1). & (q40742|rad23_orysa : 370.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (gnl|cdd|35235 : 361.0) no description available & (gnl|cdd|29207 : 111.0) no description available & (reliability: 828.0) & (original description: Putative RAD23C, Description = Ubiquitin receptor RAD23c, PFAM = PF09280;PF00240;PF00627;PF00627)' T '28.2' 'DNA.repair' 'niben101scf09505_184114-198841' '(at1g49980 : 683.0) DNA/RNA polymerases superfamily protein; FUNCTIONS IN: damaged DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA repair; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, Y-family, little finger domain (InterPro:IPR017961), DNA-repair protein, UmuC-like (InterPro:IPR001126), DNA-repair protein, UmuC-like, N-terminal (InterPro:IPR017963); BEST Arabidopsis thaliana protein match is: DNA-directed DNA polymerases (TAIR:AT5G44750.1); Has 10430 Blast hits to 10220 proteins in 2419 species: Archae - 210; Bacteria - 6752; Metazoa - 626; Fungi - 433; Plants - 141; Viruses - 0; Other Eukaryotes - 2268 (source: NCBI BLink). & (gnl|cdd|37305 : 581.0) no description available & (gnl|cdd|48491 : 362.0) no description available & (reliability: 1366.0) & (original description: Putative Polk, Description = Polymerase kappa isoform 9, PFAM = PF11799;PF11798;PF00817)' T '28.2' 'DNA.repair' 'niben101scf09505_184150-198801' '(at1g49980 : 639.0) DNA/RNA polymerases superfamily protein; FUNCTIONS IN: damaged DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA repair; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, Y-family, little finger domain (InterPro:IPR017961), DNA-repair protein, UmuC-like (InterPro:IPR001126), DNA-repair protein, UmuC-like, N-terminal (InterPro:IPR017963); BEST Arabidopsis thaliana protein match is: DNA-directed DNA polymerases (TAIR:AT5G44750.1); Has 10430 Blast hits to 10220 proteins in 2419 species: Archae - 210; Bacteria - 6752; Metazoa - 626; Fungi - 433; Plants - 141; Viruses - 0; Other Eukaryotes - 2268 (source: NCBI BLink). & (gnl|cdd|37305 : 479.0) no description available & (gnl|cdd|48491 : 277.0) no description available & (reliability: 1278.0) & (original description: Putative POLK, Description = DNA-directed polymerase kappa, PFAM = PF00817;PF00817;PF11798;PF11799)' T '28.2' 'DNA.repair' 'niben101scf09512_471493-475455' '(at1g01490 : 93.6) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G63950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative Sb01g030730, Description = Putative uncharacterized protein Sb01g030730, PFAM = PF00403)' T '28.2' 'DNA.repair' 'niben101scf10298_252193-264454' '(at5g28740 : 1323.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 2811 Blast hits to 1455 proteins in 237 species: Archae - 16; Bacteria - 22; Metazoa - 987; Fungi - 875; Plants - 477; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink). & (gnl|cdd|37258 : 1077.0) no description available & (reliability: 2646.0) & (original description: Putative xab2, Description = Similar to Xab2 protein, PFAM = )' T '28.2' 'DNA.repair' 'niben101scf10650_92858-120211' '(at5g48120 : 744.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 594 Blast hits to 356 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 233; Plants - 48; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|37178 : 421.0) no description available & (reliability: 1488.0) & (original description: Putative KK1_000447, Description = MMS19 nucleotide excision repair protein isogeny, PFAM = PF14500;PF12460)' T '28.2' 'DNA.repair' 'niben101scf11037_208204-219600' '(at1g03190 : 1323.0) UV damage and heat induce a common stress response in plants that leads to tissue death and reduced chloroplast function. The UVH6 product is suggested to be a negative regulator of this response.; ULTRAVIOLET HYPERSENSITIVE 6 (UVH6); FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, response to UV, response to heat; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Helicase, superfamily 1/2, ATP-binding domain, DinG/Rad3-type (InterPro:IPR014013), Xeroderma pigmentosum group D protein (InterPro:IPR001945), Helicase-like, DEXD box c2 type (InterPro:IPR006554), Helicase, ATP-dependent, c2 type (InterPro:IPR006555), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD2 (InterPro:IPR010614), DNA helicase (DNA repair), Rad3 type (InterPro:IPR013020), Protein of unknown function DUF1227 (InterPro:IPR010643); BEST Arabidopsis thaliana protein match is: RAD3-like DNA-binding helicase protein (TAIR:AT1G20720.1); Has 3290 Blast hits to 2576 proteins in 779 species: Archae - 308; Bacteria - 1186; Metazoa - 653; Fungi - 359; Plants - 198; Viruses - 2; Other Eukaryotes - 584 (source: NCBI BLink). & (gnl|cdd|36346 : 1134.0) no description available & (gnl|cdd|47794 : 299.0) no description available & (reliability: 2646.0) & (original description: Putative XPD, Description = DNA repair helicase XPD, PFAM = PF13307;PF06733;PF06777)' T '28.2' 'DNA.repair' 'niben101scf12422_90846-96034' '(at3g47830 : 308.0) DNA glycosylase superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, base-excision repair; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 4804 Blast hits to 4804 proteins in 1691 species: Archae - 231; Bacteria - 3044; Metazoa - 109; Fungi - 99; Plants - 198; Viruses - 0; Other Eukaryotes - 1123 (source: NCBI BLink). & (gnl|cdd|30526 : 110.0) no description available & (reliability: 616.0) & (original description: Putative At3g47830, Description = Putative DNA glycosylase At3g47830, PFAM = PF00730)' T '28.2' 'DNA.repair' 'niben101scf12994_89614-103705' '(at3g18524 : 1201.0) Encodes a DNA mismatch repair homolog of human MutS gene, MSH6. MSH2 is involved in maintaining genome stability and repressing recombination of mismatched heteroduplexes.There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2 has different binding specificity to different mismatches in combination with MSH3, MSH6, or MSH7.; MUTS homolog 2 (MSH2); FUNCTIONS IN: damaged DNA binding, protein binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, negative regulation of reciprocal meiotic recombination; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695), DNA mismatch repair protein, MSH2 (InterPro:IPR011184); BEST Arabidopsis thaliana protein match is: homolog of DNA mismatch repair protein MSH3 (TAIR:AT4G25540.1); Has 13560 Blast hits to 13453 proteins in 2654 species: Archae - 128; Bacteria - 8942; Metazoa - 734; Fungi - 813; Plants - 457; Viruses - 3; Other Eukaryotes - 2483 (source: NCBI BLink). & (q9xgc9|msh2_maize : 1130.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (gnl|cdd|35440 : 679.0) no description available & (gnl|cdd|30598 : 526.0) no description available & (reliability: 2402.0) & (original description: Putative msh2, Description = DNA mismatch repair protein, PFAM = PF05192;PF05188;PF00488;PF05190)' T '28.2' 'DNA.repair' 'niben101scf12994_90209-96349' '(q9xgc9|msh2_maize : 245.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (at3g18524 : 244.0) Encodes a DNA mismatch repair homolog of human MutS gene, MSH6. MSH2 is involved in maintaining genome stability and repressing recombination of mismatched heteroduplexes.There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2 has different binding specificity to different mismatches in combination with MSH3, MSH6, or MSH7.; MUTS homolog 2 (MSH2); FUNCTIONS IN: damaged DNA binding, protein binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, negative regulation of reciprocal meiotic recombination; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695), DNA mismatch repair protein, MSH2 (InterPro:IPR011184); BEST Arabidopsis thaliana protein match is: homolog of DNA mismatch repair protein MSH3 (TAIR:AT4G25540.1); Has 13560 Blast hits to 13453 proteins in 2654 species: Archae - 128; Bacteria - 8942; Metazoa - 734; Fungi - 813; Plants - 457; Viruses - 3; Other Eukaryotes - 2483 (source: NCBI BLink). & (gnl|cdd|73044 : 214.0) no description available & (gnl|cdd|35440 : 190.0) no description available & (reliability: 488.0) & (original description: Putative msh2, Description = DNA mismatch repair protein msh-2, PFAM = PF00488)' T '28.2' 'DNA.repair' 'niben101scf13002_343311-349414' '(at3g12040 : 336.0) DNA-3-methyladenine glycosylase (MAG); FUNCTIONS IN: DNA binding, alkylbase DNA N-glycosylase activity, catalytic activity; INVOLVED IN: base-excision repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Methylpurine-DNA glycosylase (MPG) (InterPro:IPR003180), Formyl transferase, C-terminal-like (InterPro:IPR011034); Has 2384 Blast hits to 2384 proteins in 1044 species: Archae - 26; Bacteria - 1995; Metazoa - 85; Fungi - 6; Plants - 30; Viruses - 0; Other Eukaryotes - 242 (source: NCBI BLink). & (gnl|cdd|39686 : 242.0) no description available & (gnl|cdd|65976 : 231.0) no description available & (reliability: 672.0) & (original description: Putative MAG, Description = DNA-3-methyladenine glycosylase, PFAM = PF02245)' T '28.2' 'DNA.repair' 'niben101scf13036_195636-207578' '(at5g04560 : 689.0) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.; DEMETER (DME); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 3806 Blast hits to 3649 proteins in 1364 species: Archae - 237; Bacteria - 2338; Metazoa - 256; Fungi - 124; Plants - 347; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|30526 : 96.8) no description available & (reliability: 1376.0) & (original description: Putative DME2, Description = DNA demethylase, PFAM = PF15628;PF15629)' T '28.2' 'DNA.repair' 'niben101scf14076_52017-64261' '(at2g36490 : 684.0) A repressor of transcriptional gene silencing. Functions by demethylating the target promoter DNA. Interacts physically with RPA2/ROR1. In the ros1 mutants, an increase in methylation is observed in a number of gene promoters. Among the loci affected by ros1, a few (RD29A and At1g76930) are affected in cytosine methylation in all sequence contexts (CpG, CpNpG or CpNpN), although many others are affected primarily in non-CpG contexts.; demeter-like 1 (DML1); FUNCTIONS IN: protein binding, DNA N-glycosylase activity, DNA-(apurinic or apyrimidinic site) lyase activity; INVOLVED IN: DNA repair, chromatin silencing, negative regulation of chromatin silencing, DNA methylation, DNA demethylation; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: HhH-GPD base excision DNA repair family protein (TAIR:AT5G04560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30526 : 99.1) no description available & (reliability: 1368.0) & (original description: Putative pg3, Description = Transcriptional activator DEMETER, PFAM = PF15628;PF15629)' T '28.2' 'DNA.repair' 'niben101scf14837_289279-295050' '(at5g44680 : 363.0) DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT3G12710.1); Has 3656 Blast hits to 3656 proteins in 1559 species: Archae - 10; Bacteria - 3140; Metazoa - 4; Fungi - 4; Plants - 168; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (gnl|cdd|86301 : 227.0) no description available & (reliability: 726.0) & (original description: Putative tag, Description = 3-methyladenine-DNA glycosylase I, PFAM = PF03352)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold5229_50516-58141' '(at1g48650 : 164.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Double-stranded RNA-binding (InterPro:IPR001159), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G01130.1); Has 12982 Blast hits to 8882 proteins in 1499 species: Archae - 14; Bacteria - 5361; Metazoa - 2913; Fungi - 1651; Plants - 997; Viruses - 50; Other Eukaryotes - 1996 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative F23H14, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = )' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold9829_33525-49894' '(at2g25910 : 436.0) 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein; FUNCTIONS IN: 3'-5' exonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37616 : 148.0) no description available & (gnl|cdd|28891 : 92.8) no description available & (reliability: 872.0) & (original description: Putative BnaA04g15250D, Description = BnaA04g15250D protein, PFAM = PF01612;PF00013)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold10752_42424-45889' '(at1g76500 : 130.0) Encodes an AT hook domain containing protein. Identified in a screen of activation tagged lines that suppress the long-hypocotyl phenotype of a weak phyB allele. Affects cell elongation in the hypocotyl and leaves.Acts redundantly with ESC to modulate hypocotyl growth inhibition in response to light; SUPPRESSOR OF PHYB-4#3 (SOB3); FUNCTIONS IN: DNA binding; INVOLVED IN: photomorphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT1G20900.1); Has 2179 Blast hits to 1721 proteins in 190 species: Archae - 0; Bacteria - 553; Metazoa - 266; Fungi - 109; Plants - 845; Viruses - 16; Other Eukaryotes - 390 (source: NCBI BLink). & (gnl|cdd|86345 : 122.0) no description available & (reliability: 250.0) & (original description: Putative AGF1, Description = AT hook motif DNA-binding family protein, PFAM = PF03479)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold10860_2148-5112' '(at2g45430 : 223.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 137.0) no description available & (reliability: 446.0) & (original description: Putative AHL22, Description = AT-hook motif nuclear-localized protein 22, PFAM = PF03479)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold11242_39235-46413' '(at5g67240 : 333.0) small RNA degrading nuclease 3 (SDN3); FUNCTIONS IN: exonuclease activity, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: small RNA degrading nuclease 1 (TAIR:AT3G50100.1). & (gnl|cdd|37459 : 174.0) no description available & (gnl|cdd|47785 : 85.4) no description available & (reliability: 666.0) & (original description: Putative SDN1, Description = Small RNA degrading nuclease 1, PFAM = PF00929)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold12649_7461-16014' '(at2g21520 : 859.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36684 : 275.0) no description available & (gnl|cdd|84928 : 139.0) no description available & (reliability: 1718.0) & (original description: Putative SFH8, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH8, PFAM = PF00650;PF03765)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold13781_30093-38138' '(at3g19130 : 421.0) RNA-binding protein 47B (RBP47B); FUNCTIONS IN: RNA binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47A (TAIR:AT1G49600.1); Has 37628 Blast hits to 21966 proteins in 866 species: Archae - 14; Bacteria - 2376; Metazoa - 18486; Fungi - 4600; Plants - 6856; Viruses - 8; Other Eukaryotes - 5288 (source: NCBI BLink). & (gnl|cdd|35370 : 136.0) no description available & (gnl|cdd|31068 : 90.5) no description available & (reliability: 842.0) & (original description: Putative RBP47, Description = Polyadenylate-binding protein RBP47, PFAM = PF00076;PF00076;PF00076)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold15185_11525-16120' '(at5g63460 : 87.4) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), Ubiquitin ligase, Det1/DDB1-complexing (InterPro:IPR018276). & (reliability: 174.8) & (original description: Putative BnaC02g42530D, Description = BnaC02g42530D protein, PFAM = )' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold15988_1789-9795' '(at5g25100 : 1002.0) Endomembrane protein 70 protein family; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G10840.1). & (gnl|cdd|36492 : 898.0) no description available & (gnl|cdd|66650 : 666.0) no description available & (reliability: 1956.0) & (original description: Putative TMN8, Description = Transmembrane 9 superfamily member 8, PFAM = PF02990)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold19504_25546-34290' '(at5g66840 : 157.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative r18, Description = Zinc finger CCCH domain-containing protein 62, PFAM = PF02037)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold22099_16188-22246' '(at3g60600 : 201.0) Encodes VAP27 (for Vesicle-Associated Protein). VAP27 has high homology to the VAP33 family of SNARE-like proteins from animals. May be involved in vesicular transport to or from the ER. Located exclusively in limiting membrane of protein storage vacuoles. Binds SRC2.; VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1 (VAP27-1); FUNCTIONS IN: protein binding; INVOLVED IN: intracellular transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: plant VAP homolog 12 (TAIR:AT2G45140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35660 : 117.0) no description available & (gnl|cdd|84916 : 98.5) no description available & (reliability: 402.0) & (original description: Putative PVA11, Description = Vesicle-associated protein 1-1, PFAM = PF00635)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold24265_22297-29425' '(at1g47500 : 429.0) RNA-binding protein 47C' (RBP47C'); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47C (TAIR:AT1G47490.1); Has 31938 Blast hits to 20447 proteins in 871 species: Archae - 18; Bacteria - 2118; Metazoa - 16550; Fungi - 3781; Plants - 6384; Viruses - 46; Other Eukaryotes - 3041 (source: NCBI BLink). & (gnl|cdd|35370 : 130.0) no description available & (gnl|cdd|31068 : 88.6) no description available & (reliability: 780.0) & (original description: Putative nbp1, Description = Nucleic acid binding protein, PFAM = PF00076;PF00076;PF00076)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold24684_7914-12005' '(at3g42170 : 404.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|36337 : 401.0) no description available & (p08770|tra1_maize : 321.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (gnl|cdd|86928 : 93.8) no description available & (reliability: 808.0) & (original description: Putative BnaA01g29170D, Description = BnaA01g29170D protein, PFAM = PF05699;PF14372;PF02892)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold28337_837-5797' '(at4g24800 : 204.0) MA3 domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MA3 domain-containing protein (TAIR:AT5G63190.2). & (gnl|cdd|35624 : 202.0) no description available & (gnl|cdd|86147 : 102.0) no description available & (reliability: 402.0) & (original description: Putative At1g22730, Description = MA3 domain-containing protein, PFAM = PF02847)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold29326_11620-38959' '(at2g01130 : 1517.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G48650.2); Has 13137 Blast hits to 8990 proteins in 1526 species: Archae - 10; Bacteria - 5358; Metazoa - 2929; Fungi - 1766; Plants - 978; Viruses - 93; Other Eukaryotes - 2003 (source: NCBI BLink). & (gnl|cdd|36138 : 953.0) no description available & (gnl|cdd|31829 : 474.0) no description available & (reliability: 2864.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF07717;PF00035;PF00271;PF00270;PF04408)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold29326_11862-23285' '(at2g01130 : 1185.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G48650.2); Has 13137 Blast hits to 8990 proteins in 1526 species: Archae - 10; Bacteria - 5358; Metazoa - 2929; Fungi - 1766; Plants - 978; Viruses - 93; Other Eukaryotes - 2003 (source: NCBI BLink). & (gnl|cdd|36138 : 855.0) no description available & (gnl|cdd|31829 : 457.0) no description available & (reliability: 2246.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF00271;PF00270;PF04408;PF07717)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold30224_1004-4448' '(at2g45430 : 129.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 124.0) no description available & (reliability: 258.0) & (original description: Putative AHL27, Description = AT-hook motif nuclear-localized protein 27, PFAM = PF03479)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold30676_4338-13178' '(at2g01970 : 714.0) Endomembrane protein 70 protein family; INVOLVED IN: transport; LOCATED IN: integral to membrane, Golgi apparatus, plasma membrane, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT1G14670.1); Has 1574 Blast hits to 1528 proteins in 319 species: Archae - 0; Bacteria - 2; Metazoa - 611; Fungi - 238; Plants - 459; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|36491 : 697.0) no description available & (gnl|cdd|66650 : 524.0) no description available & (reliability: 1376.0) & (original description: Putative TMN3, Description = Transmembrane 9 superfamily member 3, PFAM = PF02990)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold37404_4149-7608' '(at4g17800 : 239.0) Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT2G35270.1); Has 956 Blast hits to 951 proteins in 109 species: Archae - 0; Bacteria - 110; Metazoa - 54; Fungi - 9; Plants - 764; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|86345 : 136.0) no description available & (reliability: 466.0) & (original description: Putative AHL21, Description = AT-hook motif nuclear-localized protein 21, PFAM = PF03479)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold40306_12327-22472' '(at1g64260 : 134.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 100.0) no description available & (reliability: 258.0) & (original description: Putative At3g04605, Description = Putative muDR family transposase-like, PFAM = PF10551;PF03108;PF04434;PF00564)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold41610_5684-13940' '(at1g54490 : 244.0) Involved in the ethylene response. XRN4 does not appear to regulate ethylene signaling via an RNA-INDUCED SILENCING COMPLEX-based RNA silencing mechanism but acts by independent means. Endogenous suppressor of posttranscriptional gene silencing.; exoribonuclease 4 (XRN4); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: 5'-3' exoribonuclease 3 (TAIR:AT1G75660.1); Has 1935 Blast hits to 1539 proteins in 314 species: Archae - 0; Bacteria - 132; Metazoa - 355; Fungi - 561; Plants - 185; Viruses - 14; Other Eukaryotes - 688 (source: NCBI BLink). & (gnl|cdd|37255 : 237.0) no description available & (gnl|cdd|34654 : 119.0) no description available & (reliability: 488.0) & (original description: Putative AIN1, Description = 5'-3' exoribonuclease 4, PFAM = )' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold42687_1218-7774' '(at2g25170 : 418.0) Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1. Is an extragenic suppressor of slr2 (SSL2). Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1. It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.; PICKLE (PKL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF1086 (InterPro:IPR009462), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor, putative (TAIR:AT4G31900.1); Has 20234 Blast hits to 17178 proteins in 1958 species: Archae - 161; Bacteria - 5176; Metazoa - 5098; Fungi - 4334; Plants - 1876; Viruses - 134; Other Eukaryotes - 3455 (source: NCBI BLink). & (gnl|cdd|35604 : 306.0) no description available & (q7g8y3|isw2_orysa : 206.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|30899 : 118.0) no description available & (reliability: 836.0) & (original description: Putative chd3, Description = Chromodomain-helicase-DNA-binding protein 3, PFAM = PF00271;PF00176)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold57088_1955-7635' '(at1g71260 : 159.0) Encodes WHY2, a homolog of the potato p24 protein. It shares the conserved KGKAAL domain, a putative DNA-binding domain, with potato p24 and is localized to mitochondria and not the nucleus. WHY2 is a member of the Whirly family proteins present mainly in the plant kingdom performing various activities related to DNA metabolism. Crystal structure of Solanum tuberosum WHY2, a close homolog of Arabidopsis WHY2, reveal that Whirly proteins bind to single strand DNA to promote accurate repair of DNA double-strand breaks over an error-prone repair pathway.; WHIRLY 2 (ATWHY2); CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Plant transcription factor (InterPro:IPR013742); BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT1G14410.1); Has 105 Blast hits to 105 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|71964 : 136.0) no description available & (reliability: 318.0) & (original description: Putative WHY1, Description = Protein WHIRLY 2, PFAM = PF08536)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold62361_4143-6683' '(at3g60600 : 118.0) Encodes VAP27 (for Vesicle-Associated Protein). VAP27 has high homology to the VAP33 family of SNARE-like proteins from animals. May be involved in vesicular transport to or from the ER. Located exclusively in limiting membrane of protein storage vacuoles. Binds SRC2.; VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1 (VAP27-1); FUNCTIONS IN: protein binding; INVOLVED IN: intracellular transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: plant VAP homolog 12 (TAIR:AT2G45140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35660 : 88.0) no description available & (reliability: 236.0) & (original description: Putative Os02g0661900, Description = Os02g0661900 protein, PFAM = PF00635)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold66776_626-6839' '(at1g44542 : 280.0) Cyclase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Putative cyclase (InterPro:IPR007325); BEST Arabidopsis thaliana protein match is: Cyclase family protein (TAIR:AT4G34180.1); Has 1444 Blast hits to 1444 proteins in 543 species: Archae - 85; Bacteria - 1182; Metazoa - 21; Fungi - 4; Plants - 86; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|32062 : 116.0) no description available & (reliability: 560.0) & (original description: Putative PGSC0003DMG400023115, Description = Kynurenine formamidase-like protein, PFAM = PF04199)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold75968_13-7973' '(at2g25170 : 795.0) Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1. Is an extragenic suppressor of slr2 (SSL2). Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1. It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.; PICKLE (PKL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF1086 (InterPro:IPR009462), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor, putative (TAIR:AT4G31900.1); Has 20234 Blast hits to 17178 proteins in 1958 species: Archae - 161; Bacteria - 5176; Metazoa - 5098; Fungi - 4334; Plants - 1876; Viruses - 134; Other Eukaryotes - 3455 (source: NCBI BLink). & (gnl|cdd|35604 : 458.0) no description available & (gnl|cdd|84584 : 260.0) no description available & (q7g8y3|isw2_orysa : 202.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1590.0) & (original description: Putative chd3, Description = Chromodomain-helicase-DNA-binding protein 5, PFAM = PF00628;PF00176;PF00385;PF00385)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold83538_395-5810' '(at3g27970 : 464.0) Exonuclease family protein; FUNCTIONS IN: zinc ion binding, exonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Zinc finger, C2H2-type (InterPro:IPR007087), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: Exonuclease family protein (TAIR:AT5G40310.1); Has 1318 Blast hits to 1314 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 581; Fungi - 387; Plants - 223; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|37460 : 263.0) no description available & (gnl|cdd|47785 : 105.0) no description available & (reliability: 928.0) & (original description: Putative C2H2L25, Description = RNA exonuclease 4, PFAM = PF00929)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold85452_1-4189' '(at3g19184 : 132.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative ABI14, Description = B3 domain-containing protein, PFAM = PF02362)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold101812_665-3817' '(at3g42170 : 478.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|36337 : 282.0) no description available & (p08770|tra1_maize : 185.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (reliability: 956.0) & (original description: Putative HAT, Description = Putative zinc finger BED domain-containing protein DAYSLEEPER-like, PFAM = PF02892;PF14372)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold105250_1-3368' '(at1g49920 : 110.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (gnl|cdd|72786 : 100.0) no description available & (reliability: 220.0) & (original description: Putative SDM1_53t00022, Description = Zinc finger containing preotein, putative, PFAM = PF03108;PF10551;PF04434)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold107736_1-3061' '(gnl|cdd|30860 : 184.0) no description available & (gnl|cdd|35572 : 164.0) no description available & (at5g27680 : 134.0) DNA helicase; RECQ helicase SIM (RECQSIM); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RECQ helicase L2 (TAIR:AT1G31360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative recQ, Description = ATP-dependent DNA helicase RecQ, PFAM = PF00270)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold118789_1-2258' '(at1g19260 : 246.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 476.0) & (original description: Putative At1g19260, Description = General transcription factor 2-related zinc finger protein, PFAM = PF14291)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold142782_1-1234' '(gnl|cdd|36337 : 129.0) no description available & (p03010|trac9_maize : 118.0) Putative AC9 transposase - Zea mays (Maize) & (at3g42170 : 114.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|86928 : 93.1) no description available & (reliability: 228.0) & (original description: Putative PGSC0003DMG400040321, Description = Putative AC9 transposase, PFAM = PF05699;PF14372)' T '28.99' 'DNA.unspecified' 'nbv0.3scaffold171306_1-737' '(at1g43260 : 89.0) hAT transposon superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily protein (TAIR:AT5G31412.1); Has 599 Blast hits to 592 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 2; Plants - 577; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative PGSC0003DMG400030248, Description = Putative ovule protein, PFAM = PF04937)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold158_814944-817601' '(at3g12410 : 98.2) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G12460.1); Has 208 Blast hits to 196 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 197; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|39574 : 88.2) no description available & (reliability: 179.4) & (original description: Putative Os01g0737600, Description = Os01g0737600 protein, PFAM = PF01612)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold174_601880-607276' '(at5g67240 : 285.0) small RNA degrading nuclease 3 (SDN3); FUNCTIONS IN: exonuclease activity, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: small RNA degrading nuclease 1 (TAIR:AT3G50100.1). & (gnl|cdd|37459 : 167.0) no description available & (gnl|cdd|47785 : 85.8) no description available & (reliability: 570.0) & (original description: Putative SDN1, Description = Small RNA degrading nuclease 3, PFAM = PF00929)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold217_464590-467928' '(gnl|cdd|36337 : 217.0) no description available & (p08770|tra1_maize : 172.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (at3g42170 : 171.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|86928 : 103.0) no description available & (reliability: 342.0) & (original description: Putative PGSC0003DMG400017490, Description = 93317-95488, PFAM = PF14372;PF05699)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold222_78923-84936' '(at2g27110 : 1022.0) FAR1-related sequence 3 (FRS3); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), MULE transposase, conserved domain (InterPro:IPR018289); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 5 (TAIR:AT4G38180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 2044.0) & (original description: Putative FRS3, Description = Protein FAR1-RELATED SEQUENCE 3, PFAM = PF04434;PF03101;PF10551;PF07258)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold234_678505-702275' '(at3g52905 : 180.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, nucleic acid binding; INVOLVED IN: DNA repair, response to DNA damage stimulus, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process, DNA recombination; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Resolvase, RNase H-like fold (InterPro:IPR006641), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Resolvase, holliday junction-type, YqgF-like (InterPro:IPR005227); Has 4393 Blast hits to 4393 proteins in 1559 species: Archae - 0; Bacteria - 3177; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 1190 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative GRF1, Description = GRF domain class transcription factor, PFAM = PF03652)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold320_792155-801295' '(at5g66840 : 159.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative r18, Description = Zinc finger CCCH domain-containing protein 62, PFAM = PF02037)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold325_302426-308131' '(at2g21540 : 608.0) SEC14-like 3 (SFH3); FUNCTIONS IN: phosphatidylinositol transporter activity; INVOLVED IN: flower development, transport; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39180.1). & (gnl|cdd|36684 : 269.0) no description available & (gnl|cdd|84928 : 142.0) no description available & (reliability: 1108.0) & (original description: Putative SFH12, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH12, PFAM = PF03765;PF00650)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold326_160876-166307' '(at3g27970 : 506.0) Exonuclease family protein; FUNCTIONS IN: zinc ion binding, exonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Zinc finger, C2H2-type (InterPro:IPR007087), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: Exonuclease family protein (TAIR:AT5G40310.1); Has 1318 Blast hits to 1314 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 581; Fungi - 387; Plants - 223; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|37460 : 286.0) no description available & (gnl|cdd|47785 : 106.0) no description available & (reliability: 1012.0) & (original description: Putative C2H2L25, Description = C2H2L domain class transcription factor, PFAM = PF00929)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold348_587518-598089' '(at1g22260 : 468.0) One of two nearly identical proteins (ZYP1b) identified by similarity to transverse filament (TF) proteins. These proteins are involved in chromosome synapsis during meiosis I and localize to the synaptonemal complex (SC). Single mutants have reduced fertility and double mutants (induced by RNAi) have severely reduced fertility.; ZYP1a; BEST Arabidopsis thaliana protein match is: Myosin heavy chain-related protein (TAIR:AT1G22275.1); Has 173955 Blast hits to 88084 proteins in 3391 species: Archae - 2245; Bacteria - 35093; Metazoa - 72717; Fungi - 13338; Plants - 8123; Viruses - 835; Other Eukaryotes - 41604 (source: NCBI BLink). & (gnl|cdd|35383 : 88.8) no description available & (reliability: 912.0) & (original description: Putative ZYP1A, Description = Synaptonemal complex protein 1, PFAM = )' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold415_592657-615530' '(at3g02060 : 1206.0) DEAD/DEAH box helicase, putative; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription-repair-coupling factor (InterPro:IPR005118), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Transcription factor CarD (InterPro:IPR003711), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein (TAIR:AT2G01440.1); Has 31156 Blast hits to 30938 proteins in 2896 species: Archae - 262; Bacteria - 19852; Metazoa - 1548; Fungi - 988; Plants - 649; Viruses - 13; Other Eukaryotes - 7844 (source: NCBI BLink). & (gnl|cdd|31390 : 638.0) no description available & (gnl|cdd|35565 : 354.0) no description available & (reliability: 2412.0) & (original description: Putative mfd, Description = TRCF, PFAM = PF00271;PF02559;PF00270)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold454_826226-829698' '(gnl|cdd|36337 : 306.0) no description available & (p08770|tra1_maize : 277.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (at3g42170 : 208.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|86928 : 104.0) no description available & (reliability: 416.0) & (original description: Putative BnaC03g16310D, Description = BnaC03g16310D protein, PFAM = PF05699;PF14372)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold469_216582-221420' '(at1g71260 : 139.0) Encodes WHY2, a homolog of the potato p24 protein. It shares the conserved KGKAAL domain, a putative DNA-binding domain, with potato p24 and is localized to mitochondria and not the nucleus. WHY2 is a member of the Whirly family proteins present mainly in the plant kingdom performing various activities related to DNA metabolism. Crystal structure of Solanum tuberosum WHY2, a close homolog of Arabidopsis WHY2, reveal that Whirly proteins bind to single strand DNA to promote accurate repair of DNA double-strand breaks over an error-prone repair pathway.; WHIRLY 2 (ATWHY2); CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Plant transcription factor (InterPro:IPR013742); BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT1G14410.1); Has 105 Blast hits to 105 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|71964 : 134.0) no description available & (reliability: 278.0) & (original description: Putative WHY1, Description = Protein WHIRLY 2, PFAM = PF08536)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold587_232306-238482' '(at1g49920 : 166.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (gnl|cdd|72786 : 81.2) no description available & (reliability: 332.0) & (original description: Putative Os06g0632700, Description = Os06g0632700 protein, PFAM = PF10551;PF00564;PF04434;PF03108)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold599_667012-669986' '(at2g45430 : 199.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 145.0) no description available & (reliability: 398.0) & (original description: Putative AHL16, Description = AT-hook motif nuclear-localized protein 16, PFAM = PF03479)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold684_13548-17896' '(at1g64260 : 105.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold727_187063-190838' '(at4g17800 : 246.0) Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT2G35270.1); Has 956 Blast hits to 951 proteins in 109 species: Archae - 0; Bacteria - 110; Metazoa - 54; Fungi - 9; Plants - 764; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|86345 : 136.0) no description available & (reliability: 478.0) & (original description: Putative AHL21, Description = AT-hook motif nuclear-localized protein 21, PFAM = PF03479)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold974_42919-59092' '(at5g15170 : 753.0) tyrosyl-DNA phosphodiesterase-related; FUNCTIONS IN: 3'-tyrosyl-DNA phosphodiesterase activity; INVOLVED IN: DNA repair; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Tyrosyl-DNA phosphodiesterase (InterPro:IPR010347), SMAD/FHA domain (InterPro:IPR008984); BEST Arabidopsis thaliana protein match is: forkhead-associated domain-containing protein / FHA domain-containing protein (TAIR:AT5G07400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37242 : 426.0) no description available & (gnl|cdd|87018 : 392.0) no description available & (reliability: 1506.0) & (original description: Putative TDP1, Description = Tyrosyl-DNA phosphodiesterase 1, PFAM = PF06087)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold1037_331274-387510' '(at2g25170 : 1697.0) Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1. Is an extragenic suppressor of slr2 (SSL2). Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1. It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.; PICKLE (PKL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF1086 (InterPro:IPR009462), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor, putative (TAIR:AT4G31900.1); Has 20234 Blast hits to 17178 proteins in 1958 species: Archae - 161; Bacteria - 5176; Metazoa - 5098; Fungi - 4334; Plants - 1876; Viruses - 134; Other Eukaryotes - 3455 (source: NCBI BLink). & (gnl|cdd|35605 : 713.0) no description available & (q7g8y3|isw2_orysa : 400.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|30899 : 310.0) no description available & (reliability: 3394.0) & (original description: Putative PKL, Description = CHD3-type chromatin-remodeling factor PICKLE, PFAM = PF00628;PF00385;PF00385;PF00176;PF06465;PF06461;PF00271)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold1315_24762-27708' '(at2g45430 : 218.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 141.0) no description available & (reliability: 436.0) & (original description: Putative AHL22, Description = AT-hook motif nuclear-localized protein 22, PFAM = PF03479)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold1349_264656-276569' '(at1g48650 : 1337.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Double-stranded RNA-binding (InterPro:IPR001159), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G01130.1); Has 12982 Blast hits to 8882 proteins in 1499 species: Archae - 14; Bacteria - 5361; Metazoa - 2913; Fungi - 1651; Plants - 997; Viruses - 50; Other Eukaryotes - 1996 (source: NCBI BLink). & (gnl|cdd|36138 : 592.0) no description available & (gnl|cdd|31829 : 353.0) no description available & (reliability: 2674.0) & (original description: Putative At1g48650, Description = DExH-box ATP-dependent RNA helicase DExH3, PFAM = PF00035;PF00270;PF07717;PF00271;PF04408)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold1948_152234-156971' '(at4g24800 : 204.0) MA3 domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MA3 domain-containing protein (TAIR:AT5G63190.2). & (gnl|cdd|35624 : 202.0) no description available & (gnl|cdd|86147 : 102.0) no description available & (reliability: 402.0) & (original description: Putative At1g22730, Description = MA3 domain-containing protein, PFAM = PF02847)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold1964_5363-7119' '(at1g43260 : 96.3) hAT transposon superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily protein (TAIR:AT5G31412.1); Has 599 Blast hits to 592 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 2; Plants - 577; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative PGSC0003DMG400030248, Description = Putative transposase, PFAM = PF04937)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold2017_157230-160663' '(gnl|cdd|36337 : 152.0) no description available & (p08770|tra1_maize : 144.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (at3g42170 : 119.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative BnaC01g44680D, Description = BnaC01g44680D protein, PFAM = PF14372)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold2600_156747-194394' '(at3g46960 : 1583.0) RNA helicase, ATP-dependent, SK12/DOB1 protein; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT1G59760.1); Has 10417 Blast hits to 7271 proteins in 1110 species: Archae - 777; Bacteria - 3025; Metazoa - 1455; Fungi - 1476; Plants - 602; Viruses - 48; Other Eukaryotes - 3034 (source: NCBI BLink). & (gnl|cdd|36165 : 1231.0) no description available & (gnl|cdd|34219 : 703.0) no description available & (reliability: 3166.0) & (original description: Putative SKI2, Description = Antiviral helicase, PFAM = PF08148;PF13234;PF00271;PF00270)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold2904_3626-13785' '(at1g64260 : 146.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 100.0) no description available & (reliability: 286.0) & (original description: Putative At3g04605, Description = Putative muDR family transposase-like, PFAM = PF04434;PF10551;PF03108;PF00564)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold2927_268060-276453' '(at4g35220 : 342.0) Cyclase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Putative cyclase (InterPro:IPR007325); BEST Arabidopsis thaliana protein match is: Cyclase family protein (TAIR:AT1G44542.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86574 : 115.0) no description available & (reliability: 684.0) & (original description: Putative CCC_00854, Description = Kynurenine formamidase bacterial, PFAM = PF04199;PF04199)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold3526_160550-166728' '(at5g63460 : 130.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), Ubiquitin ligase, Det1/DDB1-complexing (InterPro:IPR018276). & (reliability: 260.0) & (original description: Putative PGSC0003DMG400015243, Description = Det1 complexing ubiquitin ligase, PFAM = PF02037;PF10172)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold3545_187491-191845' '(at3g42170 : 823.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|36337 : 399.0) no description available & (p08770|tra1_maize : 273.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (gnl|cdd|86928 : 106.0) no description available & (reliability: 1646.0) & (original description: Putative HAT, Description = Zinc finger BED domain-containing protein DAYSLEEPER, PFAM = PF02892;PF14372;PF05699)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold3598_58860-236510' '(gnl|cdd|30860 : 343.0) no description available & (gnl|cdd|35572 : 261.0) no description available & (at1g60930 : 201.0) AtRECQ4B mutant showed no sensitivity to DNA damaging agents.Involved in homologous recombination.; RECQ helicase L4B (RECQ4B); FUNCTIONS IN: in 8 functions; INVOLVED IN: DNA recombination; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), HRDC-like (InterPro:IPR010997), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: DNA helicase (RECQl4A) (TAIR:AT1G10930.1); Has 28171 Blast hits to 28052 proteins in 2731 species: Archae - 327; Bacteria - 17551; Metazoa - 2839; Fungi - 1949; Plants - 1368; Viruses - 5; Other Eukaryotes - 4132 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative Sb02g043160, Description = Putative uncharacterized protein Sb02g043160, PFAM = PF16124;PF00271;PF09382;PF14493;PF00570)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold4287_59349-64005' '(gnl|cdd|68508 : 98.0) no description available & (at3g17450 : 88.6) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative PGSC0003DMG400017078, Description = Putative ovule protein, PFAM = PF04937;PF04937)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold4632_53204-65753' '(gnl|cdd|35762 : 210.0) no description available & (gnl|cdd|34623 : 122.0) no description available & (at3g15140 : 82.4) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); Has 576 Blast hits to 576 proteins in 123 species: Archae - 0; Bacteria - 44; Metazoa - 336; Fungi - 16; Plants - 80; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative eri2, Description = ERI1 exoribonuclease 2, PFAM = PF00929)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold4721_84916-112604' '(at2g01440 : 1127.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: ATP-dependent DNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA repair, DNA recombination; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA helicase, ATP-dependent, RecG (InterPro:IPR004609), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box helicase, putative (TAIR:AT3G02060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31393 : 596.0) no description available & (gnl|cdd|35565 : 238.0) no description available & (reliability: 2254.0) & (original description: Putative RECG, Description = ATP-dependent DNA helicase homolog RECG, chloroplastic, PFAM = PF00271;PF00270)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold5722_128028-132602' '(at5g63460 : 99.4) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), Ubiquitin ligase, Det1/DDB1-complexing (InterPro:IPR018276). & (reliability: 198.8) & (original description: Putative BnaC02g42530D, Description = Det1 complexing ubiquitin ligase, PFAM = PF02037)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold6403_70124-74073' '(at1g49920 : 96.7) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative , Description = Putative ovule protein, PFAM = PF04434;PF10551)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold6566_52353-61351' '(at2g25910 : 318.0) 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein; FUNCTIONS IN: 3'-5' exonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37616 : 119.0) no description available & (reliability: 636.0) & (original description: Putative TCM_037248, Description = 3'-5' exonuclease domain-containing protein / K domain-containing protein / KH domain-containing protein isoform 3, PFAM = PF00013;PF01612)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold8382_5268-14202' '(at1g08350 : 620.0) Endomembrane protein 70 protein family; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G37310.1); Has 1602 Blast hits to 1535 proteins in 321 species: Archae - 0; Bacteria - 3; Metazoa - 611; Fungi - 269; Plants - 455; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|36491 : 578.0) no description available & (gnl|cdd|66650 : 485.0) no description available & (reliability: 1176.0) & (original description: Putative TMN5, Description = Transmembrane 9 superfamily member 5, PFAM = PF02990)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold8789_17741-29261' '(at2g32415 : 431.0) Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: shoot apex; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain (TAIR:AT5G35910.1). & (gnl|cdd|37417 : 246.0) no description available & (gnl|cdd|85567 : 173.0) no description available & (reliability: 862.0) & (original description: Putative srm, Description = Exosome component 10, PFAM = PF01612)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold9138_1754-5916' '(at1g64260 : 121.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF03108;PF10551;PF04434)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold9401_16415-19368' '(at4g14465 : 158.0) AT-hook motif nuclear-localized protein 20 (AHL20); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 19 (TAIR:AT3G04570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 137.0) no description available & (reliability: 306.0) & (original description: Putative AHL15, Description = AT-hook motif nuclear-localized protein 15, PFAM = PF03479)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold9881_56-11884' '(at4g35740 : 810.0) Encodes RECQ3, an ATP-dependent helicase.; RecQl3; FUNCTIONS IN: ATP binding, ATP-dependent helicase activity; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RECQ helicase L2 (TAIR:AT1G31360.1); Has 28158 Blast hits to 28089 proteins in 2765 species: Archae - 286; Bacteria - 16813; Metazoa - 3341; Fungi - 2669; Plants - 1491; Viruses - 10; Other Eukaryotes - 3548 (source: NCBI BLink). & (gnl|cdd|35572 : 472.0) no description available & (gnl|cdd|30860 : 414.0) no description available & (reliability: 1620.0) & (original description: Putative RECQL3, Description = ATP-dependent DNA helicase Q-like 3, PFAM = PF00270;PF00271;PF16124)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold18861_1-1543' '(at1g43260 : 140.0) hAT transposon superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily protein (TAIR:AT5G31412.1); Has 599 Blast hits to 592 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 2; Plants - 577; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|68508 : 140.0) no description available & (reliability: 280.0) & (original description: Putative PGSC0003DMG400030248, Description = BnaA05g17040D protein, PFAM = PF04937)' T '28.99' 'DNA.unspecified' 'nbv0.5scaffold44688_1-789' '(at3g17450 : 163.0) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|68508 : 145.0) no description available & (reliability: 316.0) & (original description: Putative BnaA05g17040D, Description = BnaA05g17040D protein, PFAM = PF04937)' T '28.99' 'DNA.unspecified' 'niben044ctg24614548_1-530' '(gnl|cdd|36337 : 125.0) no description available & (p08770|tra1_maize : 118.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (at3g42170 : 83.6) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative BH1, Description = HAT family dimerisation domain containing protein, PFAM = )' T '28.99' 'DNA.unspecified' 'niben044scf00000710ctg000_793-3503' '(at3g29765 : 196.0) General transcription factor 2-related zinc finger protein; BEST Arabidopsis thaliana protein match is: TTF-type zinc finger protein with HAT dimerisation domain (TAIR:AT1G19260.1); Has 937 Blast hits to 895 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 559; Fungi - 1; Plants - 375; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative At1g19260, Description = General transcription factor 2-related zinc finger protein, PFAM = PF14291)' T '28.99' 'DNA.unspecified' 'niben044scf00001100ctg026_3786-6181' '(at3g51700 : 105.0) PIF1 helicase; CONTAINS InterPro DOMAIN/s: DNA helicase PIF1, ATP-dependent (InterPro:IPR010285); BEST Arabidopsis thaliana protein match is: PIF1 helicase (TAIR:AT3G51690.1); Has 1335 Blast hits to 1330 proteins in 296 species: Archae - 2; Bacteria - 310; Metazoa - 217; Fungi - 167; Plants - 426; Viruses - 5; Other Eukaryotes - 208 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative MTR_4g134740, Description = PIF1 helicase, PFAM = PF02689)' T '28.99' 'DNA.unspecified' 'niben044scf00001496ctg007_6353-9653' '(at4g39810 : 319.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT1G74390.1); Has 1538 Blast hits to 1532 proteins in 632 species: Archae - 0; Bacteria - 1272; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (gnl|cdd|47785 : 100.0) no description available & (reliability: 638.0) & (original description: Putative ugu1, Description = Exonuclease, putative, PFAM = PF00929)' T '28.99' 'DNA.unspecified' 'niben044scf00001941ctg005_1267-8258' '(at4g34490 : 581.0) CYCLASE ASSOCIATED PROTEIN; cyclase associated protein 1 (CAP1); CONTAINS InterPro DOMAIN/s: Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal (InterPro:IPR016098), CAP, conserved site (InterPro:IPR018106), Adenylate cyclase-associated CAP (InterPro:IPR001837), CARP motif (InterPro:IPR006599), Adenylate cyclase-associated CAP, N-terminal (InterPro:IPR013992), C-CAP/cofactor C-like domain (InterPro:IPR017901), Adenylate cyclase-associated CAP, C-terminal (InterPro:IPR013912); Has 618 Blast hits to 612 proteins in 211 species: Archae - 0; Bacteria - 2; Metazoa - 296; Fungi - 160; Plants - 51; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (gnl|cdd|37886 : 479.0) no description available & (gnl|cdd|85310 : 202.0) no description available & (reliability: 1162.0) & (original description: Putative CAP1, Description = Cyclase-associated protein 1, PFAM = PF01213;PF08603)' T '28.99' 'DNA.unspecified' 'niben044scf00002213ctg012_1-10490' '(at4g14700 : 958.0) Encodes origin of replication complex 1a subunit.The protein contains a PHD domain,binds methylated DNA and appears to function as a transcriptional activator.; origin recognition complex 1 (ORC1A); CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Origin recognition complex, subunit 1 (InterPro:IPR020793), ATPase, AAA+ type, core (InterPro:IPR003593), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: origin of replication complex 1B (TAIR:AT4G12620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36727 : 615.0) no description available & (gnl|cdd|72858 : 235.0) no description available & (reliability: 1916.0) & (original description: Putative ORC1, Description = Origin of replication complex subunit 1, PFAM = PF01426;PF00004;PF00628)' T '28.99' 'DNA.unspecified' 'niben044scf00002419ctg014_3944-12130' '(at5g15170 : 494.0) tyrosyl-DNA phosphodiesterase-related; FUNCTIONS IN: 3'-tyrosyl-DNA phosphodiesterase activity; INVOLVED IN: DNA repair; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Tyrosyl-DNA phosphodiesterase (InterPro:IPR010347), SMAD/FHA domain (InterPro:IPR008984); BEST Arabidopsis thaliana protein match is: forkhead-associated domain-containing protein / FHA domain-containing protein (TAIR:AT5G07400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37242 : 258.0) no description available & (gnl|cdd|87018 : 253.0) no description available & (reliability: 988.0) & (original description: Putative TDP1, Description = Tyrosyl-DNA phosphodiesterase 1, PFAM = PF06087)' T '28.99' 'DNA.unspecified' 'niben044scf00002763ctg000_1755-5002' '(at2g45430 : 193.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 146.0) no description available & (reliability: 386.0) & (original description: Putative AHL22, Description = AT-hook motif nuclear-localized protein 22, PFAM = PF03479)' T '28.99' 'DNA.unspecified' 'niben044scf00003968ctg000_20572-24425' '(at2g45430 : 129.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 121.0) no description available & (reliability: 258.0) & (original description: Putative AHL27, Description = AT-hook motif nuclear-localized protein 27, PFAM = PF03479)' T '28.99' 'DNA.unspecified' 'niben044scf00007006ctg003_2261-10581' '(gnl|cdd|37255 : 636.0) no description available & (at1g54490 : 585.0) Involved in the ethylene response. XRN4 does not appear to regulate ethylene signaling via an RNA-INDUCED SILENCING COMPLEX-based RNA silencing mechanism but acts by independent means. Endogenous suppressor of posttranscriptional gene silencing.; exoribonuclease 4 (XRN4); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: 5'-3' exoribonuclease 3 (TAIR:AT1G75660.1); Has 1935 Blast hits to 1539 proteins in 314 species: Archae - 0; Bacteria - 132; Metazoa - 355; Fungi - 561; Plants - 185; Viruses - 14; Other Eukaryotes - 688 (source: NCBI BLink). & (gnl|cdd|34654 : 421.0) no description available & (reliability: 1170.0) & (original description: Putative xrn2, Description = LOC100049102 protein, PFAM = PF03159;PF00098)' T '28.99' 'DNA.unspecified' 'niben044scf00007089ctg003_1-2275' '(at2g48100 : 95.5) Exonuclease family protein; FUNCTIONS IN: exonuclease activity, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Zinc finger, C2H2-type (InterPro:IPR007087), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: Exonuclease family protein (TAIR:AT3G27970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 191.0) & (original description: Putative At2g48100, Description = Putative ovule protein, PFAM = )' T '28.99' 'DNA.unspecified' 'niben044scf00007893ctg006_1-3822' '(at4g36490 : 332.0) SEC14-like 12 (SFH12); CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT2G18180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36684 : 203.0) no description available & (gnl|cdd|84928 : 139.0) no description available & (reliability: 648.0) & (original description: Putative BnaC04g33440D, Description = BnaC04g33440D protein, PFAM = PF00650)' T '28.99' 'DNA.unspecified' 'niben044scf00009819ctg006_1-6400' '(at3g19130 : 400.0) RNA-binding protein 47B (RBP47B); FUNCTIONS IN: RNA binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47A (TAIR:AT1G49600.1); Has 37628 Blast hits to 21966 proteins in 866 species: Archae - 14; Bacteria - 2376; Metazoa - 18486; Fungi - 4600; Plants - 6856; Viruses - 8; Other Eukaryotes - 5288 (source: NCBI BLink). & (gnl|cdd|35370 : 125.0) no description available & (gnl|cdd|31068 : 87.0) no description available & (p19683|roc4_nicsy : 82.4) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 800.0) & (original description: Putative RBP47, Description = Polyadenylate-binding protein RBP47, PFAM = PF00076;PF00076;PF00076)' T '28.99' 'DNA.unspecified' 'niben044scf00012370ctg005_13518-25428' '(at1g54490 : 230.0) Involved in the ethylene response. XRN4 does not appear to regulate ethylene signaling via an RNA-INDUCED SILENCING COMPLEX-based RNA silencing mechanism but acts by independent means. Endogenous suppressor of posttranscriptional gene silencing.; exoribonuclease 4 (XRN4); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: 5'-3' exoribonuclease 3 (TAIR:AT1G75660.1); Has 1935 Blast hits to 1539 proteins in 314 species: Archae - 0; Bacteria - 132; Metazoa - 355; Fungi - 561; Plants - 185; Viruses - 14; Other Eukaryotes - 688 (source: NCBI BLink). & (gnl|cdd|37255 : 190.0) no description available & (gnl|cdd|34654 : 144.0) no description available & (reliability: 460.0) & (original description: Putative xrn2, Description = 5'-3' exoribonuclease 2, PFAM = )' T '28.99' 'DNA.unspecified' 'niben044scf00012383ctg000_2764-6955' '(at1g49920 : 101.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551;PF04434)' T '28.99' 'DNA.unspecified' 'niben044scf00013594ctg002_3463-12848' '(at2g25170 : 1023.0) Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1. Is an extragenic suppressor of slr2 (SSL2). Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1. It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.; PICKLE (PKL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF1086 (InterPro:IPR009462), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor, putative (TAIR:AT4G31900.1); Has 20234 Blast hits to 17178 proteins in 1958 species: Archae - 161; Bacteria - 5176; Metazoa - 5098; Fungi - 4334; Plants - 1876; Viruses - 134; Other Eukaryotes - 3455 (source: NCBI BLink). & (gnl|cdd|35604 : 630.0) no description available & (q7g8y3|isw2_orysa : 323.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|84584 : 272.0) no description available & (reliability: 2046.0) & (original description: Putative chd3, Description = Chromodomain-helicase-DNA-binding protein 3, PFAM = PF00176;PF00271;PF00628;PF00385;PF00385)' T '28.99' 'DNA.unspecified' 'niben044scf00015222ctg005_3977-21117' '(at3g57300 : 1809.0) Encodes the Arabidopsis INO80 ortholog of the SWI/SNF ATPase family. Functions as a positive regulator of DNA homologous recombination (HR). In INO80 mutants, the HR frequency is reduced to 15% of that in the wild-type. Mutation in INO80 does not affect sensitivity to genotoxic agents and efficiency of T-DNA integration. INO80 was also shown to regulate a subset of the Arabidopsis transcriptome.; INO80 ortholog (INO80); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: somatic cell DNA recombination, positive regulation of DNA repair, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA binding domain, INO80 (InterPro:IPR020838), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein (TAIR:AT3G12810.1). & (gnl|cdd|35609 : 1241.0) no description available & (gnl|cdd|84584 : 294.0) no description available & (q7g8y3|isw2_orysa : 255.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 3618.0) & (original description: Putative INO80, Description = DNA helicase INO80, PFAM = PF00176;PF13892;PF00271)' T '28.99' 'DNA.unspecified' 'niben044scf00015325ctg005_13283-15827' '(at1g43260 : 105.0) hAT transposon superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily protein (TAIR:AT5G31412.1); Has 599 Blast hits to 592 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 2; Plants - 577; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|68508 : 99.0) no description available & (reliability: 210.0) & (original description: Putative PGSC0003DMG400030248, Description = Putative ovule protein, PFAM = PF04937)' T '28.99' 'DNA.unspecified' 'niben044scf00015746ctg001_1-5964' '(at2g25170 : 191.0) Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1. Is an extragenic suppressor of slr2 (SSL2). Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1. It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.; PICKLE (PKL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF1086 (InterPro:IPR009462), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor, putative (TAIR:AT4G31900.1); Has 20234 Blast hits to 17178 proteins in 1958 species: Archae - 161; Bacteria - 5176; Metazoa - 5098; Fungi - 4334; Plants - 1876; Viruses - 134; Other Eukaryotes - 3455 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative CHR6, Description = CHD3-type chromatin-remodeling factor PICKLE, PFAM = PF08074)' T '28.99' 'DNA.unspecified' 'niben044scf00016699ctg004_18346-26881' '(at2g21520 : 903.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36684 : 276.0) no description available & (gnl|cdd|84928 : 139.0) no description available & (reliability: 1806.0) & (original description: Putative SFH8, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH8, PFAM = PF00650;PF03765)' T '28.99' 'DNA.unspecified' 'niben044scf00017083ctg001_1-5029' '(at4g35740 : 472.0) Encodes RECQ3, an ATP-dependent helicase.; RecQl3; FUNCTIONS IN: ATP binding, ATP-dependent helicase activity; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RECQ helicase L2 (TAIR:AT1G31360.1); Has 28158 Blast hits to 28089 proteins in 2765 species: Archae - 286; Bacteria - 16813; Metazoa - 3341; Fungi - 2669; Plants - 1491; Viruses - 10; Other Eukaryotes - 3548 (source: NCBI BLink). & (gnl|cdd|35572 : 290.0) no description available & (gnl|cdd|30860 : 229.0) no description available & (reliability: 944.0) & (original description: Putative recQ, Description = ATP-dependent DNA helicase RecQ, PFAM = PF00271;PF16124)' T '28.99' 'DNA.unspecified' 'niben044scf00018319ctg002_5725-10043' '(at5g26940 : 258.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39990 : 140.0) no description available & (gnl|cdd|47785 : 125.0) no description available & (reliability: 516.0) & (original description: Putative DPD1, Description = Exonuclease DPD1, chloroplastic/mitochondrial, PFAM = PF00929)' T '28.99' 'DNA.unspecified' 'niben044scf00018580ctg000_1612-14931' '(at1g27880 : 829.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein (TAIR:AT4G35740.1); Has 41244 Blast hits to 39032 proteins in 2984 species: Archae - 762; Bacteria - 21282; Metazoa - 5401; Fungi - 4173; Plants - 3671; Viruses - 588; Other Eukaryotes - 5367 (source: NCBI BLink). & (gnl|cdd|35572 : 380.0) no description available & (gnl|cdd|30860 : 308.0) no description available & (reliability: 1658.0) & (original description: Putative RECQL5, Description = ATP-dependent DNA helicase Q-like 5, PFAM = PF00271;PF00270)' T '28.99' 'DNA.unspecified' 'niben044scf00019477ctg009_1-3459' '(at3g42170 : 812.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|36337 : 396.0) no description available & (p08770|tra1_maize : 263.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (gnl|cdd|86928 : 107.0) no description available & (reliability: 1624.0) & (original description: Putative Os01g0518400, Description = Zinc finger BED domain-containing protein RICESLEEPER 4, PFAM = PF14372;PF05699;PF02892)' T '28.99' 'DNA.unspecified' 'niben044scf00020173ctg002_1-756' '(gnl|cdd|68508 : 135.0) no description available & (at3g17450 : 134.0) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative BnaA07g02460D, Description = BnaA07g02460D protein, PFAM = PF04937)' T '28.99' 'DNA.unspecified' 'niben044scf00020634ctg002_36221-39111' '(at4g17800 : 195.0) Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT2G35270.1); Has 956 Blast hits to 951 proteins in 109 species: Archae - 0; Bacteria - 110; Metazoa - 54; Fungi - 9; Plants - 764; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|86345 : 136.0) no description available & (reliability: 378.0) & (original description: Putative AHL21, Description = AT-hook motif nuclear-localized protein 21, PFAM = PF03479)' T '28.99' 'DNA.unspecified' 'niben044scf00020802ctg023_424-6221' '(at3g42170 : 766.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|36337 : 396.0) no description available & (p08770|tra1_maize : 273.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (gnl|cdd|86928 : 106.0) no description available & (reliability: 1532.0) & (original description: Putative HAT, Description = Putative zinc finger BED domain-containing protein DAYSLEEPER-like, PFAM = PF05699;PF14372)' T '28.99' 'DNA.unspecified' 'niben044scf00021368ctg004_1-1474' '(at1g19260 : 145.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative At1g19260, Description = HAT family dimerisation domain containing protein, PFAM = PF14291)' T '28.99' 'DNA.unspecified' 'niben044scf00021684ctg000_1077-10934' '(at5g63190 : 1009.0) MA3 domain-containing protein; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MA3 domain-containing protein (TAIR:AT3G48390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35624 : 905.0) no description available & (gnl|cdd|86147 : 123.0) no description available & (reliability: 2018.0) & (original description: Putative At4g24800, Description = AT4g24800/F6I7_10, PFAM = PF02847;PF02847;PF02847;PF02847)' T '28.99' 'DNA.unspecified' 'niben044scf00021684ctg000_2544-8090' '(at4g24800 : 206.0) MA3 domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MA3 domain-containing protein (TAIR:AT5G63190.2). & (gnl|cdd|35624 : 202.0) no description available & (gnl|cdd|86147 : 101.0) no description available & (reliability: 408.0) & (original description: Putative At1g22730, Description = MA3 domain-containing protein, PFAM = PF02847)' T '28.99' 'DNA.unspecified' 'niben044scf00021684ctg002_7383-13298' '(at5g63190 : 920.0) MA3 domain-containing protein; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MA3 domain-containing protein (TAIR:AT3G48390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35624 : 855.0) no description available & (gnl|cdd|86147 : 123.0) no description available & (reliability: 1840.0) & (original description: Putative At1g22730, Description = MA3 domain-containing protein, PFAM = PF02847;PF02847;PF02847;PF02847)' T '28.99' 'DNA.unspecified' 'niben044scf00022004ctg001_1127-5922' '(gnl|cdd|36337 : 240.0) no description available & (at3g42170 : 198.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (p08770|tra1_maize : 163.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (reliability: 396.0) & (original description: Putative , Description = , PFAM = PF14372;PF05699)' T '28.99' 'DNA.unspecified' 'niben044scf00022471ctg002_7543-11963' '(at3g42170 : 826.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|36337 : 398.0) no description available & (p08770|tra1_maize : 275.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (gnl|cdd|86928 : 106.0) no description available & (reliability: 1652.0) & (original description: Putative HAT, Description = Zinc finger BED domain-containing protein DAYSLEEPER, PFAM = PF02892;PF05699;PF14372)' T '28.99' 'DNA.unspecified' 'niben044scf00023242ctg005_9008-11824' '(gnl|cdd|68508 : 147.0) no description available & (at1g43260 : 120.0) hAT transposon superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily protein (TAIR:AT5G31412.1); Has 599 Blast hits to 592 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 2; Plants - 577; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative PGSC0003DMG400030248, Description = BnaA05g17040D protein, PFAM = PF04937)' T '28.99' 'DNA.unspecified' 'niben044scf00024116ctg010_1642-14805' '(at3g46960 : 413.0) RNA helicase, ATP-dependent, SK12/DOB1 protein; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT1G59760.1); Has 10417 Blast hits to 7271 proteins in 1110 species: Archae - 777; Bacteria - 3025; Metazoa - 1455; Fungi - 1476; Plants - 602; Viruses - 48; Other Eukaryotes - 3034 (source: NCBI BLink). & (gnl|cdd|36165 : 139.0) no description available & (reliability: 826.0) & (original description: Putative SKI2, Description = Helicase SKI2W, PFAM = )' T '28.99' 'DNA.unspecified' 'niben044scf00025688ctg008_357-6766' '(at2g25910 : 284.0) 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein; FUNCTIONS IN: 3'-5' exonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37616 : 124.0) no description available & (reliability: 568.0) & (original description: Putative BnaA04g15250D, Description = Exonuclease 3'-5' domain-containing protein 1, PFAM = PF01612;PF00013)' T '28.99' 'DNA.unspecified' 'niben044scf00026747ctg003_1-6048' '(at3g02060 : 544.0) DEAD/DEAH box helicase, putative; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription-repair-coupling factor (InterPro:IPR005118), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Transcription factor CarD (InterPro:IPR003711), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein (TAIR:AT2G01440.1); Has 31156 Blast hits to 30938 proteins in 2896 species: Archae - 262; Bacteria - 19852; Metazoa - 1548; Fungi - 988; Plants - 649; Viruses - 13; Other Eukaryotes - 7844 (source: NCBI BLink). & (gnl|cdd|31390 : 274.0) no description available & (gnl|cdd|35565 : 200.0) no description available & (reliability: 1088.0) & (original description: Putative mfd, Description = TRCF, PFAM = PF00270;PF02559)' T '28.99' 'DNA.unspecified' 'niben044scf00027103ctg002_1-8390' '(at4g35220 : 397.0) Cyclase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Putative cyclase (InterPro:IPR007325); BEST Arabidopsis thaliana protein match is: Cyclase family protein (TAIR:AT1G44542.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86574 : 123.0) no description available & (reliability: 794.0) & (original description: Putative At4g35220, Description = AT4g35220/F23E12_220, PFAM = PF04199)' T '28.99' 'DNA.unspecified' 'niben044scf00027632ctg001_1266-5441' '(at5g67240 : 151.0) small RNA degrading nuclease 3 (SDN3); FUNCTIONS IN: exonuclease activity, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: small RNA degrading nuclease 1 (TAIR:AT3G50100.1). & (gnl|cdd|37459 : 98.6) no description available & (reliability: 302.0) & (original description: Putative BnaA06g25760D, Description = BnaA06g25760D protein, PFAM = )' T '28.99' 'DNA.unspecified' 'niben044scf00028919ctg012_7024-12906' '(at2g01970 : 949.0) Endomembrane protein 70 protein family; INVOLVED IN: transport; LOCATED IN: integral to membrane, Golgi apparatus, plasma membrane, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT1G14670.1); Has 1574 Blast hits to 1528 proteins in 319 species: Archae - 0; Bacteria - 2; Metazoa - 611; Fungi - 238; Plants - 459; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|36491 : 873.0) no description available & (gnl|cdd|66650 : 615.0) no description available & (reliability: 1858.0) & (original description: Putative TMN3, Description = Transmembrane 9 superfamily member 3, PFAM = PF02990)' T '28.99' 'DNA.unspecified' 'niben044scf00030685ctg009_13091-19169' '(at1g49920 : 142.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (gnl|cdd|72786 : 96.6) no description available & (reliability: 284.0) & (original description: Putative Os06g0632700, Description = Os06g0632700 protein, PFAM = PF00564;PF03108;PF04434;PF10551)' T '28.99' 'DNA.unspecified' 'niben044scf00030940ctg014_494-7664' '(at3g19130 : 423.0) RNA-binding protein 47B (RBP47B); FUNCTIONS IN: RNA binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47A (TAIR:AT1G49600.1); Has 37628 Blast hits to 21966 proteins in 866 species: Archae - 14; Bacteria - 2376; Metazoa - 18486; Fungi - 4600; Plants - 6856; Viruses - 8; Other Eukaryotes - 5288 (source: NCBI BLink). & (gnl|cdd|35370 : 137.0) no description available & (gnl|cdd|31068 : 93.2) no description available & (reliability: 846.0) & (original description: Putative RBP47, Description = Polyadenylate-binding protein RBP47, PFAM = PF00076;PF00076;PF00076)' T '28.99' 'DNA.unspecified' 'niben044scf00034184ctg010_10054-28247' '(at3g21430 : 827.0) ALWAYS EARLY 3 (ALY3); FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), DIRP (InterPro:IPR010561); BEST Arabidopsis thaliana protein match is: DIRP ;Myb-like DNA-binding domain (TAIR:AT3G05380.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36237 : 216.0) no description available & (gnl|cdd|87115 : 141.0) no description available & (reliability: 1654.0) & (original description: Putative ALY3, Description = Protein ALWAYS EARLY 3, PFAM = PF06584;PF00249)' T '28.99' 'DNA.unspecified' 'niben044scf00036215ctg008_597-7527' '(at3g19184 : 124.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative PGSC0003DMG400015771, Description = B3 DNA binding domain-containing protein, PFAM = PF02362)' T '28.99' 'DNA.unspecified' 'niben044scf00041770ctg000_21223-25585' '(gnl|cdd|72948 : 90.8) no description available & (at1g52950 : 87.8) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Protein of unknown function DUF223 (InterPro:IPR003871), Replication factor A, C-terminal (InterPro:IPR013955); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G05642.1); Has 1159 Blast hits to 1070 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 144; Plants - 865; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative , Description = , PFAM = PF08646)' T '28.99' 'DNA.unspecified' 'niben044scf00044271ctg002_4105-8196' '(at3g42170 : 401.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|36337 : 398.0) no description available & (p08770|tra1_maize : 311.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (gnl|cdd|86928 : 94.6) no description available & (reliability: 802.0) & (original description: Putative BnaC06g31060D, Description = BnaC06g31060D protein, PFAM = PF14372;PF02892;PF05699)' T '28.99' 'DNA.unspecified' 'niben044scf00053883ctg002_1-3577' '(at3g19184 : 132.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative ABI14, Description = B3 domain-containing protein, PFAM = PF02362)' T '28.99' 'DNA.unspecified' 'niben044scf00059728ctg004_30007-36632' '(gnl|cdd|37891 : 586.0) no description available & (at3g49830 : 557.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: DNA helicase activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: TIP49, C-terminal (InterPro:IPR010339), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G67630.1); Has 1217 Blast hits to 1215 proteins in 377 species: Archae - 91; Bacteria - 194; Metazoa - 298; Fungi - 306; Plants - 114; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|87013 : 408.0) no description available & (reliability: 1114.0) & (original description: Putative RUVBL2, Description = RuvB-like 2, PFAM = PF06068;PF05496)' T '28.99' 'DNA.unspecified' 'niben101ctg16037_1127-6451' '(at2g21540 : 619.0) SEC14-like 3 (SFH3); FUNCTIONS IN: phosphatidylinositol transporter activity; INVOLVED IN: flower development, transport; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39180.1). & (gnl|cdd|36684 : 263.0) no description available & (gnl|cdd|84928 : 145.0) no description available & (reliability: 1124.0) & (original description: Putative Os05g0545000, Description = Os05g0545000 protein, PFAM = PF00650;PF03765)' T '28.99' 'DNA.unspecified' 'niben101scf00063_636261-642788' '(at5g07710 : 479.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT5G61390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47785 : 104.0) no description available & (reliability: 958.0) & (original description: Putative NEN1, Description = Protein NEN1, PFAM = PF00929)' T '28.99' 'DNA.unspecified' 'niben101scf00066_499988-503276' '(at1g64260 : 99.4) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative Sb07g022850, Description = Putative ovule protein, PFAM = PF10551;PF04434)' T '28.99' 'DNA.unspecified' 'niben101scf00107_376556-387629' '(at1g44542 : 276.0) Cyclase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Putative cyclase (InterPro:IPR007325); BEST Arabidopsis thaliana protein match is: Cyclase family protein (TAIR:AT4G34180.1); Has 1444 Blast hits to 1444 proteins in 543 species: Archae - 85; Bacteria - 1182; Metazoa - 21; Fungi - 4; Plants - 86; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|86574 : 112.0) no description available & (reliability: 552.0) & (original description: Putative At4g34180, Description = AT4g34180/F28A23_60, PFAM = PF04199)' T '28.99' 'DNA.unspecified' 'niben101scf00113_461506-464042' '(at3g29765 : 198.0) General transcription factor 2-related zinc finger protein; BEST Arabidopsis thaliana protein match is: TTF-type zinc finger protein with HAT dimerisation domain (TAIR:AT1G19260.1); Has 937 Blast hits to 895 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 559; Fungi - 1; Plants - 375; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative At1g19260, Description = General transcription factor 2-related zinc finger protein, PFAM = PF14291)' T '28.99' 'DNA.unspecified' 'niben101scf00142_152293-155246' '(at4g14465 : 183.0) AT-hook motif nuclear-localized protein 20 (AHL20); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 19 (TAIR:AT3G04570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 134.0) no description available & (reliability: 354.0) & (original description: Putative AHL15, Description = AT-hook motif nuclear-localized protein 15, PFAM = PF03479)' T '28.99' 'DNA.unspecified' 'niben101scf00160_923996-928124' '(gnl|cdd|36337 : 398.0) no description available & (at3g42170 : 382.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (p08770|tra1_maize : 301.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (gnl|cdd|86928 : 91.1) no description available & (reliability: 764.0) & (original description: Putative BnaA01g29170D, Description = BnaA01g29170D protein, PFAM = PF05699;PF02892;PF14372)' T '28.99' 'DNA.unspecified' 'niben101scf00163_316417-322504' '(at4g12050 : 130.0) Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT4G22810.1); Has 6654 Blast hits to 4300 proteins in 274 species: Archae - 0; Bacteria - 187; Metazoa - 2435; Fungi - 660; Plants - 926; Viruses - 16; Other Eukaryotes - 2430 (source: NCBI BLink). & (gnl|cdd|86345 : 124.0) no description available & (reliability: 258.0) & (original description: Putative AGF1, Description = AT hook motif DNA-binding family protein, PFAM = PF03479)' T '28.99' 'DNA.unspecified' 'niben101scf00211_1348-4495' '(gnl|cdd|36337 : 188.0) no description available & (p08770|tra1_maize : 174.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (at3g42170 : 141.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative Os02g0237700, Description = Putative ovule protein, PFAM = )' T '28.99' 'DNA.unspecified' 'niben101scf00220_518823-526023' '(at1g79890 : 914.0) RAD3-like DNA-binding helicase protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD2 (InterPro:IPR010614), DEAD-like helicase, N-terminal (InterPro:IPR014001), Helicase, superfamily 1/2, ATP-binding domain, DinG/Rad3-type (InterPro:IPR014013), DNA helicase (DNA repair), Rad3 type (InterPro:IPR013020), Helicase, ATP-dependent, c2 type (InterPro:IPR006555); BEST Arabidopsis thaliana protein match is: RAD3-like DNA-binding helicase protein (TAIR:AT1G79950.1); Has 2489 Blast hits to 1811 proteins in 412 species: Archae - 187; Bacteria - 188; Metazoa - 839; Fungi - 373; Plants - 265; Viruses - 5; Other Eukaryotes - 632 (source: NCBI BLink). & (gnl|cdd|36348 : 756.0) no description available & (gnl|cdd|70212 : 175.0) no description available & (reliability: 1828.0) & (original description: Putative BnaC02g47890D, Description = BnaC02g47890D protein, PFAM = PF13307;PF06733)' T '28.99' 'DNA.unspecified' 'niben101scf00229_331869-334432' '(gnl|cdd|36337 : 109.0) no description available & (at3g42170 : 99.8) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (p08770|tra1_maize : 83.2) Putative AC transposase (ORFA) - Zea mays (Maize) & (reliability: 199.6) & (original description: Putative PGSC0003DMG400017498, Description = HAT family dimerisation domain containing protein, PFAM = )' T '28.99' 'DNA.unspecified' 'niben101scf00247_285456-287794' '(at3g29763 : 118.0) General transcription factor 2-related zinc finger protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: TTF-type zinc finger protein with HAT dimerisation domain (TAIR:AT1G19260.1); Has 931 Blast hits to 894 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 569; Fungi - 1; Plants - 358; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative At1g19260, Description = HAT family dimerisation domain containing protein, PFAM = PF14291)' T '28.99' 'DNA.unspecified' 'niben101scf00304_574254-581446' '(at2g27110 : 1004.0) FAR1-related sequence 3 (FRS3); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), MULE transposase, conserved domain (InterPro:IPR018289); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 5 (TAIR:AT4G38180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 2008.0) & (original description: Putative FRS3, Description = Protein FAR1-RELATED SEQUENCE 3, PFAM = PF04434;PF03101;PF10551;PF07258;PF07258)' T '28.99' 'DNA.unspecified' 'niben101scf00317_636448-639128' '(at3g12410 : 100.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G12460.1); Has 208 Blast hits to 196 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 197; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|39574 : 93.2) no description available & (reliability: 191.8) & (original description: Putative Os01g0737600, Description = Os01g0737600 protein, PFAM = PF01612)' T '28.99' 'DNA.unspecified' 'niben101scf00321_177412-184697' '(at3g19130 : 411.0) RNA-binding protein 47B (RBP47B); FUNCTIONS IN: RNA binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47A (TAIR:AT1G49600.1); Has 37628 Blast hits to 21966 proteins in 866 species: Archae - 14; Bacteria - 2376; Metazoa - 18486; Fungi - 4600; Plants - 6856; Viruses - 8; Other Eukaryotes - 5288 (source: NCBI BLink). & (gnl|cdd|35370 : 125.0) no description available & (gnl|cdd|31068 : 90.9) no description available & (p19683|roc4_nicsy : 81.6) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 822.0) & (original description: Putative RBP47, Description = Polyadenylate-binding protein RBP47, PFAM = PF00076;PF00076;PF00076)' T '28.99' 'DNA.unspecified' 'niben101scf00332_103136-127317' '(at1g56310 : 611.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing protein (TAIR:AT5G24340.1); Has 1695 Blast hits to 1690 proteins in 549 species: Archae - 0; Bacteria - 819; Metazoa - 246; Fungi - 58; Plants - 209; Viruses - 0; Other Eukaryotes - 363 (source: NCBI BLink). & (gnl|cdd|37418 : 270.0) no description available & (gnl|cdd|85567 : 82.2) no description available & (reliability: 1222.0) & (original description: Putative BnaA09g15460D, Description = BnaA09g15460D protein, PFAM = PF01612)' T '28.99' 'DNA.unspecified' 'niben101scf00332_103184-127308' '(at1g56310 : 566.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing protein (TAIR:AT5G24340.1); Has 1695 Blast hits to 1690 proteins in 549 species: Archae - 0; Bacteria - 819; Metazoa - 246; Fungi - 58; Plants - 209; Viruses - 0; Other Eukaryotes - 363 (source: NCBI BLink). & (gnl|cdd|37418 : 256.0) no description available & (gnl|cdd|85567 : 82.2) no description available & (reliability: 1132.0) & (original description: Putative BnaA09g15460D, Description = BnaA09g15460D protein, PFAM = PF01612)' T '28.99' 'DNA.unspecified' 'niben101scf00389_59287-64972' '(at3g12560 : 346.0) Encodes a telomeric DNA-binding protein.; TRF-like 9 (TRFL9); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: telomeric DNA binding protein 1 (TAIR:AT5G13820.1); Has 334 Blast hits to 327 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 6; Plants - 306; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 690.0) & (original description: Putative TRP4, Description = Telomere repeat-binding protein 4, PFAM = )' T '28.99' 'DNA.unspecified' 'niben101scf00421_17902-24158' '(at1g49920 : 166.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (gnl|cdd|72786 : 81.2) no description available & (reliability: 332.0) & (original description: Putative Os06g0632700, Description = Os06g0632700 protein, PFAM = PF10551;PF04434;PF03108)' T '28.99' 'DNA.unspecified' 'niben101scf00440_224959-233329' '(at2g01970 : 985.0) Endomembrane protein 70 protein family; INVOLVED IN: transport; LOCATED IN: integral to membrane, Golgi apparatus, plasma membrane, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT1G14670.1); Has 1574 Blast hits to 1528 proteins in 319 species: Archae - 0; Bacteria - 2; Metazoa - 611; Fungi - 238; Plants - 459; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|36491 : 873.0) no description available & (gnl|cdd|66650 : 622.0) no description available & (reliability: 1922.0) & (original description: Putative TMN3, Description = Transmembrane 9 superfamily member 3, PFAM = PF02990)' T '28.99' 'DNA.unspecified' 'niben101scf00456_14072-19667' '(at1g18090 : 503.0) 5'-3' exonuclease family protein; FUNCTIONS IN: DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: XPG conserved site (InterPro:IPR019974), XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G29630.2); Has 2139 Blast hits to 2052 proteins in 399 species: Archae - 267; Bacteria - 71; Metazoa - 522; Fungi - 572; Plants - 187; Viruses - 16; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|37729 : 367.0) no description available & (gnl|cdd|29030 : 271.0) no description available & (q9sxq6|fen1a_orysa : 83.6) Flap endonuclease 1a (EC 3.1.-.-) (OsFEN-1a) - Oryza sativa (Rice) & (reliability: 1006.0) & (original description: Putative fenB, Description = Nuclease, Rad2 family, PFAM = PF00752;PF00867)' T '28.99' 'DNA.unspecified' 'niben101scf00479_381213-386058' '(at1g23750 : 175.0) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT1G10590.2); Has 249 Blast hits to 249 proteins in 61 species: Archae - 55; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative At4g28440, Description = Uncharacterized protein At4g28440, PFAM = )' T '28.99' 'DNA.unspecified' 'niben101scf00504_362589-367947' '(at4g28190 : 316.0) Encodes a novel Cys-rich protein with a B-box like domain that acts as a negative regulator of meristem cell accumulation in inflorescence and floral meristems as loss-of-function ult1 mutations cause inflorescence meristem enlargement, the production of extra flowers and floral organs, and a decrease in floral meristem determinacy. Acts opposite to CLF which represses AG, but preventing deposition of CLF repressive methylation marks.; ULTRAPETALA1 (ULT1); INVOLVED IN: regulation of floral meristem growth, meristem determinacy, regulation of inflorescence meristem growth, floral meristem determinacy; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 19 growth stages; CONTAINS InterPro DOMAIN/s: Developmental regulator, ULTRAPETALA (InterPro:IPR020533); BEST Arabidopsis thaliana protein match is: Developmental regulator, ULTRAPETALA (TAIR:AT2G20825.1). & (reliability: 590.0) & (original description: Putative ULT1, Description = Protein ULTRAPETALA 1, PFAM = PF01342)' T '28.99' 'DNA.unspecified' 'niben101scf00527_579798-588861' '(at2g45140 : 215.0) Encodes a Plant VAMP-Associated protein that localizes to the ER and binds to the sitosterol-binding protein ORP3a. The WFDE motif in ORP3a appears to be important for this direct interaction. Mutation of this motif causes ORP3a to relocalize to the Golgi and cytosol. The interaction between PVA12 and ORP3a does not appear to be sterol-dependent.; plant VAP homolog 12 (PVA12); FUNCTIONS IN: structural molecule activity; LOCATED IN: cytosol, endoplasmic reticulum, nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: vesicle associated protein (TAIR:AT3G60600.1); Has 1106 Blast hits to 1079 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 441; Fungi - 140; Plants - 434; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|35660 : 130.0) no description available & (gnl|cdd|84916 : 100.0) no description available & (reliability: 426.0) & (original description: Putative PVA12, Description = Vesicle-associated protein 1-2, PFAM = PF00635)' T '28.99' 'DNA.unspecified' 'niben101scf00570_87901-92416' '(at3g25670 : 408.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G13230.1); Has 67019 Blast hits to 24561 proteins in 944 species: Archae - 25; Bacteria - 3248; Metazoa - 12033; Fungi - 537; Plants - 46926; Viruses - 0; Other Eukaryotes - 4250 (source: NCBI BLink). & (p93194|rpk1_iponi : 106.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35693 : 88.5) no description available & (reliability: 796.0) & (original description: Putative PII-2, Description = Piriformospora indica-insensitive protein 2, PFAM = PF13855;PF13855;PF00560)' T '28.99' 'DNA.unspecified' 'niben101scf00571_706171-710265' '(at1g55290 : 498.0) encodes a protein whose sequence is similar to oxidoreductase, 2OG-Fe(II) oxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G13610.1); Has 8871 Blast hits to 8831 proteins in 1013 species: Archae - 0; Bacteria - 1149; Metazoa - 118; Fungi - 1068; Plants - 4986; Viruses - 0; Other Eukaryotes - 1550 (source: NCBI BLink). & (gnl|cdd|35365 : 287.0) no description available & (o04847|dv4h_catro : 186.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|33294 : 185.0) no description available & (reliability: 978.0) & (original description: Putative F6'H2, Description = Feruloyl CoA ortho-hydroxylase 2, PFAM = PF03171;PF14226)' T '28.99' 'DNA.unspecified' 'niben101scf00647_58012-61202' '(at1g11780 : 444.0) oxidoreductase, 2OG-Fe(II) oxygenase family protein; BEST Arabidopsis thaliana protein match is: 2-oxoglutarate-dependent dioxygenase family protein (TAIR:AT5G01780.2); Has 1304 Blast hits to 1304 proteins in 617 species: Archae - 0; Bacteria - 928; Metazoa - 100; Fungi - 94; Plants - 80; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|37942 : 218.0) no description available & (gnl|cdd|32959 : 80.5) no description available & (reliability: 888.0) & (original description: Putative At1g11780, Description = Alpha-ketoglutarate-dependent dioxygenase alkB, PFAM = PF13532)' T '28.99' 'DNA.unspecified' 'niben101scf00679_128285-130638' '(at3g21890 : 81.6) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: response to UV-B, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT4G15248.1); Has 1422 Blast hits to 1146 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1410; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative BnaC01g42110D, Description = BnaC01g42110D protein, PFAM = )' T '28.99' 'DNA.unspecified' 'niben101scf00770_145391-148788' '(at3g42170 : 492.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|36337 : 212.0) no description available & (p03010|trac9_maize : 125.0) Putative AC9 transposase - Zea mays (Maize) & (reliability: 984.0) & (original description: Putative Sb02g043380, Description = Putative uncharacterized protein Sb02g043380, PFAM = PF02892)' T '28.99' 'DNA.unspecified' 'niben101scf00819_379897-384120' '(at2g40410 : 457.0) Staphylococcal nuclease homologue; FUNCTIONS IN: hydrolase activity, acting on ester bonds, nuclease activity, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Staphylococcal nuclease (SNase-like) (InterPro:IPR006021), Staphylococcal nuclease (SNase-like), OB-fold (InterPro:IPR016071); BEST Arabidopsis thaliana protein match is: Ca-2+ dependent nuclease (TAIR:AT3G56170.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84867 : 125.0) no description available & (reliability: 826.0) & (original description: Putative CAN2, Description = Staphylococcal-like nuclease CAN2, PFAM = PF00565)' T '28.99' 'DNA.unspecified' 'niben101scf00839_477271-483924' '(at3g19184 : 124.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative PGSC0003DMG400015771, Description = B3 DNA binding domain-containing protein, PFAM = PF02362)' T '28.99' 'DNA.unspecified' 'niben101scf00861_517722-540680' '(at5g07710 : 133.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT5G61390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative ugu1, Description = Exonuclease, putative, PFAM = PF00929)' T '28.99' 'DNA.unspecified' 'niben101scf00870_708393-714020' '(at5g66840 : 169.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative r18, Description = Zinc finger CCCH domain-containing protein 62, PFAM = PF02037)' T '28.99' 'DNA.unspecified' 'niben101scf00875_617511-621819' '(at3g42170 : 813.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|36337 : 397.0) no description available & (p08770|tra1_maize : 273.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (gnl|cdd|86928 : 106.0) no description available & (reliability: 1626.0) & (original description: Putative HAT, Description = Zinc finger BED domain-containing protein DAYSLEEPER, PFAM = PF14372;PF05699;PF02892)' T '28.99' 'DNA.unspecified' 'niben101scf00893_224847-233055' '(at2g21520 : 813.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36684 : 276.0) no description available & (gnl|cdd|84928 : 139.0) no description available & (reliability: 1626.0) & (original description: Putative SFH8, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH8, PFAM = PF03765;PF00650)' T '28.99' 'DNA.unspecified' 'niben101scf00955_566320-574611' '(at2g01970 : 883.0) Endomembrane protein 70 protein family; INVOLVED IN: transport; LOCATED IN: integral to membrane, Golgi apparatus, plasma membrane, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT1G14670.1); Has 1574 Blast hits to 1528 proteins in 319 species: Archae - 0; Bacteria - 2; Metazoa - 611; Fungi - 238; Plants - 459; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|36491 : 782.0) no description available & (gnl|cdd|66650 : 557.0) no description available & (reliability: 1672.0) & (original description: Putative TMN3, Description = Transmembrane 9 superfamily member 3, PFAM = PF02990)' T '28.99' 'DNA.unspecified' 'niben101scf01025_772257-775069' '(gnl|cdd|36337 : 158.0) no description available & (p08770|tra1_maize : 152.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (at3g42170 : 122.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative BH1, Description = BnaC01g44680D protein, PFAM = PF14372)' T '28.99' 'DNA.unspecified' 'niben101scf01027_61673-66677' '(at1g64260 : 154.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 82.3) no description available & (reliability: 304.0) & (original description: Putative At3g06940, Description = Putative mudrA protein, PFAM = PF00564;PF04434;PF03108;PF10551)' T '28.99' 'DNA.unspecified' 'niben101scf01051_1098740-1101962' '(at2g45430 : 203.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 134.0) no description available & (reliability: 406.0) & (original description: Putative Os02g0448000, Description = Os02g0448000 protein, PFAM = PF03479)' T '28.99' 'DNA.unspecified' 'niben101scf01062_791990-798033' '(at2g24170 : 994.0) Endomembrane protein 70 protein family; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G10840.1); Has 1577 Blast hits to 1550 proteins in 327 species: Archae - 0; Bacteria - 11; Metazoa - 618; Fungi - 234; Plants - 447; Viruses - 0; Other Eukaryotes - 267 (source: NCBI BLink). & (gnl|cdd|36492 : 916.0) no description available & (gnl|cdd|66650 : 679.0) no description available & (reliability: 1988.0) & (original description: Putative TMN8, Description = Transmembrane 9 superfamily member 8, PFAM = PF02990)' T '28.99' 'DNA.unspecified' 'niben101scf01119_315679-326031' '(at3g15080 : 301.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: Exonuclease family protein (TAIR:AT5G40310.1); Has 1777 Blast hits to 1777 proteins in 250 species: Archae - 0; Bacteria - 24; Metazoa - 732; Fungi - 619; Plants - 217; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (gnl|cdd|37460 : 202.0) no description available & (gnl|cdd|47785 : 126.0) no description available & (reliability: 602.0) & (original description: Putative v1g43493, Description = Predicted protein, PFAM = PF00929)' T '28.99' 'DNA.unspecified' 'niben101scf01175_181469-208559' '(at5g28780 : 175.0) PIF1 helicase; CONTAINS InterPro DOMAIN/s: DNA helicase PIF1, ATP-dependent (InterPro:IPR010285); BEST Arabidopsis thaliana protein match is: PIF1 helicase (TAIR:AT3G51690.1); Has 1364 Blast hits to 1355 proteins in 303 species: Archae - 2; Bacteria - 367; Metazoa - 234; Fungi - 111; Plants - 389; Viruses - 9; Other Eukaryotes - 252 (source: NCBI BLink). & (gnl|cdd|36205 : 153.0) no description available & (gnl|cdd|69490 : 138.0) no description available & (reliability: 338.0) & (original description: Putative BnaAnng39530D, Description = BnaAnng39530D protein, PFAM = PF05970;PF02689)' T '28.99' 'DNA.unspecified' 'niben101scf01215_123066-132347' '(at5g15170 : 549.0) tyrosyl-DNA phosphodiesterase-related; FUNCTIONS IN: 3'-tyrosyl-DNA phosphodiesterase activity; INVOLVED IN: DNA repair; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Tyrosyl-DNA phosphodiesterase (InterPro:IPR010347), SMAD/FHA domain (InterPro:IPR008984); BEST Arabidopsis thaliana protein match is: forkhead-associated domain-containing protein / FHA domain-containing protein (TAIR:AT5G07400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37242 : 279.0) no description available & (gnl|cdd|87018 : 270.0) no description available & (reliability: 1098.0) & (original description: Putative TDP1, Description = Tyrosyl-DNA phosphodiesterase 1, PFAM = PF06087)' T '28.99' 'DNA.unspecified' 'niben101scf01215_297779-301279' '(gnl|cdd|36337 : 172.0) no description available & (gnl|cdd|86928 : 106.0) no description available & (at3g42170 : 104.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (p03010|trac9_maize : 99.4) Putative AC9 transposase - Zea mays (Maize) & (reliability: 208.0) & (original description: Putative Sb04g019795, Description = Putative uncharacterized protein Sb04g019795, PFAM = PF05699;PF14372)' T '28.99' 'DNA.unspecified' 'niben101scf01215_297794-313287' '(gnl|cdd|36337 : 267.0) no description available & (p08770|tra1_maize : 222.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (at3g42170 : 202.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|86928 : 104.0) no description available & (reliability: 404.0) & (original description: Putative Os11g0613900, Description = HAT family dimerisation domain containing protein, PFAM = PF05699;PF14372)' T '28.99' 'DNA.unspecified' 'niben101scf01215_297962-301291' '(gnl|cdd|36337 : 236.0) no description available & (p08770|tra1_maize : 187.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (at3g42170 : 177.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|86928 : 103.0) no description available & (reliability: 354.0) & (original description: Putative PGSC0003DMG400040321, Description = BED zinc finger,hAT family dimerization domain, putative, PFAM = PF14372;PF05699)' T '28.99' 'DNA.unspecified' 'niben101scf01272_64325-69307' '(at3g19184 : 132.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative ABI14, Description = B3 domain-containing protein, PFAM = PF02362)' T '28.99' 'DNA.unspecified' 'niben101scf01272_74049-78164' '(at3g19184 : 136.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative ABI14, Description = B3 domain-containing protein, PFAM = PF02362)' T '28.99' 'DNA.unspecified' 'niben101scf01272_89094-95404' '(at5g42700 : 115.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G19184.1); Has 276 Blast hits to 264 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 271; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative PGSC0003DMG400025791, Description = B3 domain-containing protein, PFAM = PF02362)' T '28.99' 'DNA.unspecified' 'niben101scf01272_124471-127989' '(at3g19184 : 232.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 464.0) & (original description: Putative Os06g0194400, Description = B3 domain-containing protein Os06g0194400, PFAM = PF02362)' T '28.99' 'DNA.unspecified' 'niben101scf01281_206566-216003' '(gnl|cdd|37891 : 738.0) no description available & (at5g67630 : 709.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: DNA helicase activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TIP49, C-terminal (InterPro:IPR010339), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G49830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|31417 : 586.0) no description available & (reliability: 1300.0) & (original description: Putative RUVBL2, Description = RuvB-like 2, PFAM = PF06068)' T '28.99' 'DNA.unspecified' 'niben101scf01295_407622-433441' '(at3g21430 : 842.0) ALWAYS EARLY 3 (ALY3); FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), DIRP (InterPro:IPR010561); BEST Arabidopsis thaliana protein match is: DIRP ;Myb-like DNA-binding domain (TAIR:AT3G05380.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36237 : 218.0) no description available & (gnl|cdd|87115 : 141.0) no description available & (reliability: 1684.0) & (original description: Putative ALY3, Description = Protein ALWAYS EARLY 3, PFAM = PF00249;PF06584)' T '28.99' 'DNA.unspecified' 'niben101scf01304_167886-175002' '(at3g13772 : 1089.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis. Overexpression of this protein in yeast alters copper and zinc homeostasis.; transmembrane nine 7 (TMN7); INVOLVED IN: cellular copper ion homeostasis, cellular zinc ion homeostasis; LOCATED IN: integral to membrane, Golgi apparatus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT1G55130.1); Has 1568 Blast hits to 1544 proteins in 321 species: Archae - 0; Bacteria - 1; Metazoa - 615; Fungi - 232; Plants - 456; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|36492 : 930.0) no description available & (gnl|cdd|66650 : 666.0) no description available & (reliability: 2126.0) & (original description: Putative TMN7, Description = Transmembrane 9 superfamily member 7, PFAM = PF02990)' T '28.99' 'DNA.unspecified' 'niben101scf01383_776990-781565' '(at3g13610 : 381.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G55290.1); Has 8779 Blast hits to 8731 proteins in 1013 species: Archae - 0; Bacteria - 1145; Metazoa - 121; Fungi - 1057; Plants - 4989; Viruses - 0; Other Eukaryotes - 1467 (source: NCBI BLink). & (gnl|cdd|35365 : 236.0) no description available & (gnl|cdd|33294 : 171.0) no description available & (o04847|dv4h_catro : 155.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 762.0) & (original description: Putative F6'H1, Description = Feruloyl CoA ortho-hydroxylase 1, PFAM = PF14226;PF03171)' T '28.99' 'DNA.unspecified' 'niben101scf01383_913368-923370' '(at1g55290 : 348.0) encodes a protein whose sequence is similar to oxidoreductase, 2OG-Fe(II) oxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G13610.1); Has 8871 Blast hits to 8831 proteins in 1013 species: Archae - 0; Bacteria - 1149; Metazoa - 118; Fungi - 1068; Plants - 4986; Viruses - 0; Other Eukaryotes - 1550 (source: NCBI BLink). & (gnl|cdd|35365 : 278.0) no description available & (gnl|cdd|33294 : 168.0) no description available & (q41452|fls_soltu : 167.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Solanum tuberosum (Potato) & (reliability: 696.0) & (original description: Putative BnaC02g04300D, Description = BnaC02g04300D protein, PFAM = PF03171;PF14226)' T '28.99' 'DNA.unspecified' 'niben101scf01385_848406-855652' '(at1g47500 : 414.0) RNA-binding protein 47C' (RBP47C'); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47C (TAIR:AT1G47490.1); Has 31938 Blast hits to 20447 proteins in 871 species: Archae - 18; Bacteria - 2118; Metazoa - 16550; Fungi - 3781; Plants - 6384; Viruses - 46; Other Eukaryotes - 3041 (source: NCBI BLink). & (gnl|cdd|35370 : 125.0) no description available & (gnl|cdd|47687 : 82.6) no description available & (reliability: 754.0) & (original description: Putative nbp1, Description = Nucleic acid binding protein, PFAM = PF00076;PF00076;PF00076)' T '28.99' 'DNA.unspecified' 'niben101scf01420_238008-242479' '(at1g68780 : 403.0) RNI-like superfamily protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G25670.1); Has 76880 Blast hits to 27020 proteins in 1013 species: Archae - 25; Bacteria - 5064; Metazoa - 15853; Fungi - 790; Plants - 50474; Viruses - 2; Other Eukaryotes - 4672 (source: NCBI BLink). & (p93194|rpk1_iponi : 117.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35693 : 89.3) no description available & (reliability: 806.0) & (original description: Putative BnaA07g27410D, Description = BnaA07g27410D protein, PFAM = PF13855;PF13855)' T '28.99' 'DNA.unspecified' 'niben101scf01447_223180-250289' '(at2g25170 : 598.0) Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1. Is an extragenic suppressor of slr2 (SSL2). Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1. It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.; PICKLE (PKL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF1086 (InterPro:IPR009462), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor, putative (TAIR:AT4G31900.1); Has 20234 Blast hits to 17178 proteins in 1958 species: Archae - 161; Bacteria - 5176; Metazoa - 5098; Fungi - 4334; Plants - 1876; Viruses - 134; Other Eukaryotes - 3455 (source: NCBI BLink). & (gnl|cdd|69954 : 149.0) no description available & (gnl|cdd|35605 : 122.0) no description available & (reliability: 1196.0) & (original description: Putative chd4, Description = CHD3-type chromatin-remodeling factor PICKLE, PFAM = PF06461;PF06465;PF08074)' T '28.99' 'DNA.unspecified' 'niben101scf01447_234920-241766' '(at2g25170 : 340.0) Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1. Is an extragenic suppressor of slr2 (SSL2). Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1. It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.; PICKLE (PKL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF1086 (InterPro:IPR009462), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor, putative (TAIR:AT4G31900.1); Has 20234 Blast hits to 17178 proteins in 1958 species: Archae - 161; Bacteria - 5176; Metazoa - 5098; Fungi - 4334; Plants - 1876; Viruses - 134; Other Eukaryotes - 3455 (source: NCBI BLink). & (gnl|cdd|69954 : 139.0) no description available & (reliability: 680.0) & (original description: Putative CHR6, Description = CHD3-type chromatin-remodeling factor PICKLE, PFAM = PF06461;PF06465)' T '28.99' 'DNA.unspecified' 'niben101scf01451_512825-529273' '(at2g26970 : 283.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38452 : 254.0) no description available & (gnl|cdd|81545 : 233.0) no description available & (reliability: 566.0) & (original description: Putative orn, Description = Oligoribonuclease, PFAM = PF00929)' T '28.99' 'DNA.unspecified' 'niben101scf01462_289172-292618' '(at2g33845 : 159.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT4G28440.1); Has 251 Blast hits to 251 proteins in 51 species: Archae - 23; Bacteria - 0; Metazoa - 2; Fungi - 4; Plants - 168; Viruses - 30; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative At4g28440, Description = Uncharacterized protein At4g28440, PFAM = )' T '28.99' 'DNA.unspecified' 'niben101scf01509_242336-252861' '(at2g48100 : 337.0) Exonuclease family protein; FUNCTIONS IN: exonuclease activity, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Zinc finger, C2H2-type (InterPro:IPR007087), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: Exonuclease family protein (TAIR:AT3G27970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37460 : 225.0) no description available & (gnl|cdd|47785 : 116.0) no description available & (reliability: 674.0) & (original description: Putative C2H2L25, Description = C2H2L domain class transcription factor, PFAM = PF00929)' T '28.99' 'DNA.unspecified' 'niben101scf01513_188470-207622' '(at2g26970 : 287.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38452 : 257.0) no description available & (gnl|cdd|81545 : 234.0) no description available & (reliability: 574.0) & (original description: Putative orn, Description = Oligoribonuclease, PFAM = PF00929)' T '28.99' 'DNA.unspecified' 'niben101scf01634_257846-274130' '(at3g57300 : 1826.0) Encodes the Arabidopsis INO80 ortholog of the SWI/SNF ATPase family. Functions as a positive regulator of DNA homologous recombination (HR). In INO80 mutants, the HR frequency is reduced to 15% of that in the wild-type. Mutation in INO80 does not affect sensitivity to genotoxic agents and efficiency of T-DNA integration. INO80 was also shown to regulate a subset of the Arabidopsis transcriptome.; INO80 ortholog (INO80); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: somatic cell DNA recombination, positive regulation of DNA repair, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA binding domain, INO80 (InterPro:IPR020838), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein (TAIR:AT3G12810.1). & (gnl|cdd|35609 : 1238.0) no description available & (gnl|cdd|84584 : 293.0) no description available & (q7g8y3|isw2_orysa : 255.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 3652.0) & (original description: Putative INO80, Description = DNA helicase INO80, PFAM = PF00271;PF13892;PF00176)' T '28.99' 'DNA.unspecified' 'niben101scf01634_258079-261686' '(at3g57300 : 171.0) Encodes the Arabidopsis INO80 ortholog of the SWI/SNF ATPase family. Functions as a positive regulator of DNA homologous recombination (HR). In INO80 mutants, the HR frequency is reduced to 15% of that in the wild-type. Mutation in INO80 does not affect sensitivity to genotoxic agents and efficiency of T-DNA integration. INO80 was also shown to regulate a subset of the Arabidopsis transcriptome.; INO80 ortholog (INO80); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: somatic cell DNA recombination, positive regulation of DNA repair, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA binding domain, INO80 (InterPro:IPR020838), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein (TAIR:AT3G12810.1). & (gnl|cdd|35609 : 161.0) no description available & (q7g8y3|isw2_orysa : 100.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|30899 : 87.9) no description available & (reliability: 342.0) & (original description: Putative ino80, Description = DNA helicase INO80, PFAM = PF00271)' T '28.99' 'DNA.unspecified' 'niben101scf01655_189706-192617' '(gnl|cdd|36337 : 146.0) no description available & (at3g42170 : 129.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (p03010|trac9_maize : 111.0) Putative AC9 transposase - Zea mays (Maize) & (gnl|cdd|86928 : 89.2) no description available & (reliability: 258.0) & (original description: Putative F13F21.1, Description = F13F21.1 protein, PFAM = PF14372;PF05699)' T '28.99' 'DNA.unspecified' 'niben101scf01671_574036-584886' '(at1g49920 : 140.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (gnl|cdd|72786 : 96.9) no description available & (reliability: 280.0) & (original description: Putative Os06g0632700, Description = Os06g0632700 protein, PFAM = PF04434;PF03108;PF10551;PF00564)' T '28.99' 'DNA.unspecified' 'niben101scf01731_13836-16495' '(at4g22810 : 182.0) Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT4G12050.1); Has 813 Blast hits to 808 proteins in 45 species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 2; Plants - 764; Viruses - 2; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|86345 : 129.0) no description available & (reliability: 360.0) & (original description: Putative AHL18, Description = AT-hook motif nuclear-localized protein 18, PFAM = PF03479)' T '28.99' 'DNA.unspecified' 'niben101scf01812_86662-113019' '(at3g52390 : 534.0) TatD related DNase; FUNCTIONS IN: endodeoxyribonuclease activity, producing 5'-phosphomonoesters, deoxyribonuclease activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Deoxyribonuclease, TatD Mg-dependent (InterPro:IPR012278), Deoxyribonuclease, TatD (InterPro:IPR015992), Deoxyribonuclease, TatD-related, conserved site (InterPro:IPR018228), Deoxyribonuclease, TatD-related (InterPro:IPR001130); BEST Arabidopsis thaliana protein match is: TatD related DNase (TAIR:AT3G03500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38230 : 314.0) no description available & (gnl|cdd|30053 : 221.0) no description available & (reliability: 1068.0) & (original description: Putative tatdn1, Description = Putative deoxyribonuclease TATDN1, PFAM = PF01026)' T '28.99' 'DNA.unspecified' 'niben101scf01814_145657-151988' '(at5g66840 : 223.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative r18, Description = Zinc finger CCCH domain-containing protein 62, PFAM = PF02037)' T '28.99' 'DNA.unspecified' 'niben101scf01859_675529-678446' '(gnl|cdd|36337 : 200.0) no description available & (p08770|tra1_maize : 130.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (at3g42170 : 124.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative PGSC0003DMG400031209, Description = Os06g0470700 protein, PFAM = PF14372)' T '28.99' 'DNA.unspecified' 'niben101scf01887_756672-763685' '(at1g47490 : 365.0) RNA-binding protein 47C (RBP47C); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein 47C' (TAIR:AT1G47500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35370 : 127.0) no description available & (gnl|cdd|31068 : 96.3) no description available & (reliability: 714.0) & (original description: Putative nbp1, Description = Polyadenylate-binding protein RBP47C, PFAM = PF00076;PF00076;PF00076)' T '28.99' 'DNA.unspecified' 'niben101scf01892_186729-190629' '(gnl|cdd|36337 : 400.0) no description available & (at3g42170 : 390.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (p08770|tra1_maize : 306.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (gnl|cdd|86928 : 91.1) no description available & (reliability: 780.0) & (original description: Putative BnaA01g29170D, Description = BnaA01g29170D protein, PFAM = PF14372;PF02892;PF05699)' T '28.99' 'DNA.unspecified' 'niben101scf01964_1152913-1207579' '(gnl|cdd|39574 : 95.9) no description available & (at3g12410 : 92.4) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G12460.1); Has 208 Blast hits to 196 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 197; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative PGSC0003DMG400042198, Description = 3'-5' exonuclease domain-containing protein, PFAM = PF01612)' T '28.99' 'DNA.unspecified' 'niben101scf01976_76295-80480' '(at2g20825 : 200.0) ULTRAPETALA 2 (ULT2); FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Developmental regulator, ULTRAPETALA (InterPro:IPR020533), SAND domain (InterPro:IPR000770); BEST Arabidopsis thaliana protein match is: Developmental regulator, ULTRAPETALA (TAIR:AT4G28190.1); Has 46 Blast hits to 46 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 400.0) & (original description: Putative ULT2, Description = Protein ULTRAPETALA 2, PFAM = )' T '28.99' 'DNA.unspecified' 'niben101scf01992_104650-108527' '(at2g20825 : 197.0) ULTRAPETALA 2 (ULT2); FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Developmental regulator, ULTRAPETALA (InterPro:IPR020533), SAND domain (InterPro:IPR000770); BEST Arabidopsis thaliana protein match is: Developmental regulator, ULTRAPETALA (TAIR:AT4G28190.1); Has 46 Blast hits to 46 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative ULT2, Description = Protein ULTRAPETALA 2, PFAM = )' T '28.99' 'DNA.unspecified' 'niben101scf02014_121475-124299' '(at5g17570 : 405.0) TatD related DNase; FUNCTIONS IN: endodeoxyribonuclease activity, producing 5'-phosphomonoesters, deoxyribonuclease activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Deoxyribonuclease, TatD Mg-dependent (InterPro:IPR012278), Deoxyribonuclease, TatD (InterPro:IPR015992), Deoxyribonuclease, TatD-related (InterPro:IPR001130); BEST Arabidopsis thaliana protein match is: TatD related DNase (TAIR:AT3G03500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38230 : 205.0) no description available & (gnl|cdd|30053 : 203.0) no description available & (reliability: 810.0) & (original description: Putative BnaA10g17160D, Description = BnaA10g17160D protein, PFAM = PF01026)' T '28.99' 'DNA.unspecified' 'niben101scf02066_185088-192853' '(at5g13820 : 389.0) Encodes a protein that specifically binds plant telomeric DNA repeats. It has a single Myb telomeric DNA-binding domain in C-terminus that prefers the sequence TTTAGGG.; telomeric DNA binding protein 1 (TBP1); FUNCTIONS IN: DNA binding, double-stranded telomeric DNA binding; INVOLVED IN: telomere maintenance; LOCATED IN: chromosome, telomeric region, nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Ubiquitin supergroup (InterPro:IPR019955), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 9 (TAIR:AT3G12560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 778.0) & (original description: Putative TRP4, Description = Telomere repeat-binding protein 4, PFAM = )' T '28.99' 'DNA.unspecified' 'niben101scf02236_326323-332531' '(at3g13772 : 977.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis. Overexpression of this protein in yeast alters copper and zinc homeostasis.; transmembrane nine 7 (TMN7); INVOLVED IN: cellular copper ion homeostasis, cellular zinc ion homeostasis; LOCATED IN: integral to membrane, Golgi apparatus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT1G55130.1); Has 1568 Blast hits to 1544 proteins in 321 species: Archae - 0; Bacteria - 1; Metazoa - 615; Fungi - 232; Plants - 456; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|36492 : 862.0) no description available & (gnl|cdd|66650 : 626.0) no description available & (reliability: 1914.0) & (original description: Putative TMN7, Description = Transmembrane 9 superfamily member 7, PFAM = PF02990)' T '28.99' 'DNA.unspecified' 'niben101scf02236_327165-330656' '(at3g13772 : 164.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis. Overexpression of this protein in yeast alters copper and zinc homeostasis.; transmembrane nine 7 (TMN7); INVOLVED IN: cellular copper ion homeostasis, cellular zinc ion homeostasis; LOCATED IN: integral to membrane, Golgi apparatus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT1G55130.1); Has 1568 Blast hits to 1544 proteins in 321 species: Archae - 0; Bacteria - 1; Metazoa - 615; Fungi - 232; Plants - 456; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|36492 : 109.0) no description available & (reliability: 320.0) & (original description: Putative EMP1, Description = Transmembrane 9 superfamily member, PFAM = PF02990)' T '28.99' 'DNA.unspecified' 'niben101scf02243_782319-798598' '(at4g32175 : 342.0) PNAS-3 related; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: PNAS-3 related (TAIR:AT2G25355.1); Has 535 Blast hits to 535 proteins in 248 species: Archae - 104; Bacteria - 0; Metazoa - 113; Fungi - 163; Plants - 59; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (gnl|cdd|36222 : 233.0) no description available & (gnl|cdd|31294 : 126.0) no description available & (reliability: 684.0) & (original description: Putative exosc3, Description = Putative exosome complex component rrp40, PFAM = PF15985)' T '28.99' 'DNA.unspecified' 'niben101scf02255_78968-82064' '(at1g64260 : 86.3) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative , Description = Putative ovule protein, PFAM = PF04434;PF10551)' T '28.99' 'DNA.unspecified' 'niben101scf02293_296263-299710' '(gnl|cdd|36337 : 198.0) no description available & (p08770|tra1_maize : 163.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (at3g42170 : 143.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|86928 : 101.0) no description available & (reliability: 286.0) & (original description: Putative PGSC0003DMG400040321, Description = HAT family dimerisation domain containing protein, PFAM = PF14372;PF05699)' T '28.99' 'DNA.unspecified' 'niben101scf02318_607251-613470' '(at3g15140 : 391.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); Has 576 Blast hits to 576 proteins in 123 species: Archae - 0; Bacteria - 44; Metazoa - 336; Fungi - 16; Plants - 80; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink). & (gnl|cdd|35762 : 133.0) no description available & (reliability: 782.0) & (original description: Putative Sb10g012821, Description = Putative uncharacterized protein Sb10g012821, PFAM = PF00929)' T '28.99' 'DNA.unspecified' 'niben101scf02363_87749-93126' '(at3g13772 : 1071.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis. Overexpression of this protein in yeast alters copper and zinc homeostasis.; transmembrane nine 7 (TMN7); INVOLVED IN: cellular copper ion homeostasis, cellular zinc ion homeostasis; LOCATED IN: integral to membrane, Golgi apparatus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT1G55130.1); Has 1568 Blast hits to 1544 proteins in 321 species: Archae - 0; Bacteria - 1; Metazoa - 615; Fungi - 232; Plants - 456; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|36492 : 936.0) no description available & (gnl|cdd|66650 : 679.0) no description available & (reliability: 2090.0) & (original description: Putative TMN7, Description = Transmembrane 9 superfamily member 7, PFAM = PF02990)' T '28.99' 'DNA.unspecified' 'niben101scf02384_117731-121555' '(at2g33845 : 159.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT4G28440.1); Has 251 Blast hits to 251 proteins in 51 species: Archae - 23; Bacteria - 0; Metazoa - 2; Fungi - 4; Plants - 168; Viruses - 30; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative At1g10590, Description = DNA-binding family protein, PFAM = )' T '28.99' 'DNA.unspecified' 'niben101scf02390_218578-222669' '(at3g42170 : 405.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|36337 : 399.0) no description available & (p08770|tra1_maize : 320.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (gnl|cdd|86928 : 93.5) no description available & (reliability: 810.0) & (original description: Putative BnaA01g29170D, Description = BnaA01g29170D protein, PFAM = PF02892;PF14372;PF05699)' T '28.99' 'DNA.unspecified' 'niben101scf02407_774853-807969' '(gnl|cdd|36337 : 137.0) no description available & (p08770|tra1_maize : 115.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (at3g42170 : 111.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative PGSC0003DMG400016410, Description = , PFAM = PF14372)' T '28.99' 'DNA.unspecified' 'niben101scf02407_804884-808119' '(gnl|cdd|36337 : 232.0) no description available & (p08770|tra1_maize : 202.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (at3g42170 : 181.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative Os11g0613900, Description = Os11g0613900 protein, PFAM = PF05699;PF14372)' T '28.99' 'DNA.unspecified' 'niben101scf02500_89803-94725' '(at1g55290 : 298.0) encodes a protein whose sequence is similar to oxidoreductase, 2OG-Fe(II) oxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G13610.1); Has 8871 Blast hits to 8831 proteins in 1013 species: Archae - 0; Bacteria - 1149; Metazoa - 118; Fungi - 1068; Plants - 4986; Viruses - 0; Other Eukaryotes - 1550 (source: NCBI BLink). & (gnl|cdd|35365 : 190.0) no description available & (o04847|dv4h_catro : 130.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|33294 : 125.0) no description available & (reliability: 594.0) & (original description: Putative Diox2, Description = Leucoanthocyanidin dioxygenase, putative, PFAM = PF03171)' T '28.99' 'DNA.unspecified' 'niben101scf02730_20909-25279' '(at3g27970 : 519.0) Exonuclease family protein; FUNCTIONS IN: zinc ion binding, exonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Zinc finger, C2H2-type (InterPro:IPR007087), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: Exonuclease family protein (TAIR:AT5G40310.1); Has 1318 Blast hits to 1314 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 581; Fungi - 387; Plants - 223; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|37460 : 293.0) no description available & (gnl|cdd|47785 : 114.0) no description available & (reliability: 1038.0) & (original description: Putative C2H2L25, Description = C2H2L domain class transcription factor, PFAM = PF00929)' T '28.99' 'DNA.unspecified' 'niben101scf02794_171440-173811' '(at3g21890 : 89.7) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: response to UV-B, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT4G15248.1); Has 1422 Blast hits to 1146 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1410; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative PGSC0003DMG400026169, Description = B-box type zinc finger family protein, putative, PFAM = )' T '28.99' 'DNA.unspecified' 'niben101scf02816_1694590-1697564' '(at2g45430 : 195.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 145.0) no description available & (reliability: 390.0) & (original description: Putative AHL22, Description = AT-hook motif nuclear-localized protein 22, PFAM = PF03479)' T '28.99' 'DNA.unspecified' 'niben101scf02832_203578-212067' '(at4g35220 : 337.0) Cyclase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Putative cyclase (InterPro:IPR007325); BEST Arabidopsis thaliana protein match is: Cyclase family protein (TAIR:AT1G44542.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86574 : 115.0) no description available & (reliability: 674.0) & (original description: Putative TCM_007123, Description = Cyclase family protein, putative, PFAM = PF04199;PF04199)' T '28.99' 'DNA.unspecified' 'niben101scf02853_365925-374346' '(at5g63190 : 1012.0) MA3 domain-containing protein; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MA3 domain-containing protein (TAIR:AT3G48390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35624 : 904.0) no description available & (gnl|cdd|86147 : 123.0) no description available & (reliability: 2024.0) & (original description: Putative MTR_4g104360, Description = Topoisomerase-like protein, PFAM = PF02847;PF02847;PF02847;PF02847)' T '28.99' 'DNA.unspecified' 'niben101scf02853_367392-372443' '(at4g24800 : 203.0) MA3 domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MA3 domain-containing protein (TAIR:AT5G63190.2). & (gnl|cdd|35624 : 202.0) no description available & (gnl|cdd|86147 : 102.0) no description available & (reliability: 402.0) & (original description: Putative At1g22730, Description = MA3 domain-containing protein, PFAM = PF02847)' T '28.99' 'DNA.unspecified' 'niben101scf02853_401208-407351' '(at5g63190 : 928.0) MA3 domain-containing protein; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MA3 domain-containing protein (TAIR:AT3G48390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35624 : 852.0) no description available & (gnl|cdd|86147 : 124.0) no description available & (reliability: 1856.0) & (original description: Putative At1g22730, Description = MA3 domain-containing protein, PFAM = PF02847;PF02847;PF02847;PF02847)' T '28.99' 'DNA.unspecified' 'niben101scf02860_235766-247870' '(at5g15170 : 799.0) tyrosyl-DNA phosphodiesterase-related; FUNCTIONS IN: 3'-tyrosyl-DNA phosphodiesterase activity; INVOLVED IN: DNA repair; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Tyrosyl-DNA phosphodiesterase (InterPro:IPR010347), SMAD/FHA domain (InterPro:IPR008984); BEST Arabidopsis thaliana protein match is: forkhead-associated domain-containing protein / FHA domain-containing protein (TAIR:AT5G07400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37242 : 447.0) no description available & (gnl|cdd|87018 : 405.0) no description available & (reliability: 1598.0) & (original description: Putative TDP1, Description = Tyrosyl-DNA phosphodiesterase 1, PFAM = PF06087)' T '28.99' 'DNA.unspecified' 'niben101scf02860_239750-247699' '(at5g15170 : 488.0) tyrosyl-DNA phosphodiesterase-related; FUNCTIONS IN: 3'-tyrosyl-DNA phosphodiesterase activity; INVOLVED IN: DNA repair; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Tyrosyl-DNA phosphodiesterase (InterPro:IPR010347), SMAD/FHA domain (InterPro:IPR008984); BEST Arabidopsis thaliana protein match is: forkhead-associated domain-containing protein / FHA domain-containing protein (TAIR:AT5G07400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37242 : 261.0) no description available & (gnl|cdd|87018 : 252.0) no description available & (reliability: 976.0) & (original description: Putative TDP1, Description = Tyrosyl-DNA phosphodiesterase 1, PFAM = PF06087)' T '28.99' 'DNA.unspecified' 'niben101scf02891_468122-473949' '(at2g27110 : 895.0) FAR1-related sequence 3 (FRS3); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), MULE transposase, conserved domain (InterPro:IPR018289); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 5 (TAIR:AT4G38180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86237 : 80.0) no description available & (reliability: 1790.0) & (original description: Putative FRS3, Description = Far1-related sequence 3-like protein, PFAM = PF04434;PF03101;PF10551)' T '28.99' 'DNA.unspecified' 'niben101scf02909_310603-313499' '(at4g17800 : 218.0) Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT2G35270.1); Has 956 Blast hits to 951 proteins in 109 species: Archae - 0; Bacteria - 110; Metazoa - 54; Fungi - 9; Plants - 764; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|86345 : 136.0) no description available & (reliability: 404.0) & (original description: Putative AHL21, Description = AT-hook motif nuclear-localized protein 21, PFAM = PF03479)' T '28.99' 'DNA.unspecified' 'niben101scf02927_1064558-1066876' '(gnl|cdd|36337 : 102.0) no description available & (p03010|trac9_maize : 98.2) Putative AC9 transposase - Zea mays (Maize) & (gnl|cdd|86928 : 97.7) no description available & (at3g42170 : 88.2) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative BH1, Description = HAT family dimerisation domain containing protein, PFAM = PF05699)' T '28.99' 'DNA.unspecified' 'niben101scf03035_8262-12116' '(at2g33845 : 172.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT4G28440.1); Has 251 Blast hits to 251 proteins in 51 species: Archae - 23; Bacteria - 0; Metazoa - 2; Fungi - 4; Plants - 168; Viruses - 30; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative Os01g0754100, Description = DNA-binding protein-related-like, PFAM = )' T '28.99' 'DNA.unspecified' 'niben101scf03171_331556-342435' '(at1g64260 : 146.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 99.3) no description available & (reliability: 286.0) & (original description: Putative At3g04605, Description = Putative muDR family transposase-like, PFAM = PF03108;PF04434;PF10551;PF00564)' T '28.99' 'DNA.unspecified' 'niben101scf03226_50114-53486' '(at2g45430 : 221.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 132.0) no description available & (reliability: 442.0) & (original description: Putative AHL24, Description = AT-hook motif nuclear-localized protein 24, PFAM = PF03479)' T '28.99' 'DNA.unspecified' 'niben101scf03321_339506-342555' '(at3g17450 : 165.0) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|68508 : 142.0) no description available & (reliability: 326.0) & (original description: Putative BnaA07g02460D, Description = BnaA07g02460D protein, PFAM = PF04937)' T '28.99' 'DNA.unspecified' 'niben101scf03337_731434-733982' '(at3g60600 : 119.0) Encodes VAP27 (for Vesicle-Associated Protein). VAP27 has high homology to the VAP33 family of SNARE-like proteins from animals. May be involved in vesicular transport to or from the ER. Located exclusively in limiting membrane of protein storage vacuoles. Binds SRC2.; VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1 (VAP27-1); FUNCTIONS IN: protein binding; INVOLVED IN: intracellular transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: plant VAP homolog 12 (TAIR:AT2G45140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35660 : 90.3) no description available & (gnl|cdd|84916 : 80.4) no description available & (reliability: 238.0) & (original description: Putative CDS5, Description = Vesicle-associated protein 1-2, PFAM = PF00635)' T '28.99' 'DNA.unspecified' 'niben101scf03371_255382-280304' '(at3g02060 : 1204.0) DEAD/DEAH box helicase, putative; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription-repair-coupling factor (InterPro:IPR005118), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Transcription factor CarD (InterPro:IPR003711), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein (TAIR:AT2G01440.1); Has 31156 Blast hits to 30938 proteins in 2896 species: Archae - 262; Bacteria - 19852; Metazoa - 1548; Fungi - 988; Plants - 649; Viruses - 13; Other Eukaryotes - 7844 (source: NCBI BLink). & (gnl|cdd|31390 : 637.0) no description available & (gnl|cdd|35565 : 346.0) no description available & (reliability: 2408.0) & (original description: Putative mfd, Description = TRCF, PFAM = PF00270;PF00271;PF02559)' T '28.99' 'DNA.unspecified' 'niben101scf03374_93916-100023' '(at2g45140 : 205.0) Encodes a Plant VAMP-Associated protein that localizes to the ER and binds to the sitosterol-binding protein ORP3a. The WFDE motif in ORP3a appears to be important for this direct interaction. Mutation of this motif causes ORP3a to relocalize to the Golgi and cytosol. The interaction between PVA12 and ORP3a does not appear to be sterol-dependent.; plant VAP homolog 12 (PVA12); FUNCTIONS IN: structural molecule activity; LOCATED IN: cytosol, endoplasmic reticulum, nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: vesicle associated protein (TAIR:AT3G60600.1); Has 1106 Blast hits to 1079 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 441; Fungi - 140; Plants - 434; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|35660 : 124.0) no description available & (gnl|cdd|84916 : 107.0) no description available & (reliability: 406.0) & (original description: Putative CDS5, Description = Vesicle-associated protein 1-2, PFAM = PF00635)' T '28.99' 'DNA.unspecified' 'niben101scf03374_871204-879392' '(at1g63470 : 159.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT1G63480.1); Has 999 Blast hits to 995 proteins in 66 species: Archae - 0; Bacteria - 22; Metazoa - 171; Fungi - 26; Plants - 768; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|86345 : 122.0) no description available & (reliability: 294.0) & (original description: Putative BnaCnng43040D, Description = BnaCnng43040D protein, PFAM = PF03479)' T '28.99' 'DNA.unspecified' 'niben101scf03392_2344-58467' '(at3g52050 : 147.0) 5'-3' exonuclease family protein; FUNCTIONS IN: 5'-3' exonuclease activity, DNA binding, catalytic activity; CONTAINS InterPro DOMAIN/s: 5'-3' exonuclease, SAM-fold domain (InterPro:IPR020047), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), 5'-3' exonuclease, N-terminal (InterPro:IPR002421), 5'-3' exonuclease, N-terminal resolvase-like domain (InterPro:IPR020046), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G34380.2); Has 9778 Blast hits to 9773 proteins in 2548 species: Archae - 3; Bacteria - 6175; Metazoa - 3; Fungi - 2; Plants - 105; Viruses - 32; Other Eukaryotes - 3458 (source: NCBI BLink). & (gnl|cdd|47781 : 113.0) no description available & (reliability: 294.0) & (original description: Putative At3g52050, Description = 5'-3' exonuclease family protein, PFAM = PF01367)' T '28.99' 'DNA.unspecified' 'niben101scf03404_157970-174954' '(at3g52905 : 191.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, nucleic acid binding; INVOLVED IN: DNA repair, response to DNA damage stimulus, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process, DNA recombination; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Resolvase, RNase H-like fold (InterPro:IPR006641), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Resolvase, holliday junction-type, YqgF-like (InterPro:IPR005227); Has 4393 Blast hits to 4393 proteins in 1559 species: Archae - 0; Bacteria - 3177; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 1190 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative GRF1, Description = GRF domain class transcription factor, PFAM = PF03652)' T '28.99' 'DNA.unspecified' 'niben101scf03550_55737-68462' '(at1g48650 : 1545.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Double-stranded RNA-binding (InterPro:IPR001159), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G01130.1); Has 12982 Blast hits to 8882 proteins in 1499 species: Archae - 14; Bacteria - 5361; Metazoa - 2913; Fungi - 1651; Plants - 997; Viruses - 50; Other Eukaryotes - 1996 (source: NCBI BLink). & (gnl|cdd|36138 : 966.0) no description available & (gnl|cdd|31829 : 467.0) no description available & (reliability: 3090.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF00035;PF04408;PF07717;PF00270;PF00271)' T '28.99' 'DNA.unspecified' 'niben101scf03565_206440-209228' '(at5g28780 : 202.0) PIF1 helicase; CONTAINS InterPro DOMAIN/s: DNA helicase PIF1, ATP-dependent (InterPro:IPR010285); BEST Arabidopsis thaliana protein match is: PIF1 helicase (TAIR:AT3G51690.1); Has 1364 Blast hits to 1355 proteins in 303 species: Archae - 2; Bacteria - 367; Metazoa - 234; Fungi - 111; Plants - 389; Viruses - 9; Other Eukaryotes - 252 (source: NCBI BLink). & (gnl|cdd|36205 : 200.0) no description available & (gnl|cdd|69490 : 198.0) no description available & (reliability: 400.0) & (original description: Putative BnaC07g15370D, Description = BnaC07g15370D protein, PFAM = PF05970;PF02689)' T '28.99' 'DNA.unspecified' 'niben101scf03565_650526-677571' '(at1g54490 : 1073.0) Involved in the ethylene response. XRN4 does not appear to regulate ethylene signaling via an RNA-INDUCED SILENCING COMPLEX-based RNA silencing mechanism but acts by independent means. Endogenous suppressor of posttranscriptional gene silencing.; exoribonuclease 4 (XRN4); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: 5'-3' exoribonuclease 3 (TAIR:AT1G75660.1); Has 1935 Blast hits to 1539 proteins in 314 species: Archae - 0; Bacteria - 132; Metazoa - 355; Fungi - 561; Plants - 185; Viruses - 14; Other Eukaryotes - 688 (source: NCBI BLink). & (gnl|cdd|37255 : 959.0) no description available & (gnl|cdd|34654 : 426.0) no description available & (reliability: 2146.0) & (original description: Putative XRN4, Description = 5'-3' exoribonuclease 4, PFAM = PF00098;PF03159)' T '28.99' 'DNA.unspecified' 'niben101scf03576_205932-215833' '(at5g35970 : 1371.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, DNA binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1); Has 6377 Blast hits to 5712 proteins in 1082 species: Archae - 188; Bacteria - 2376; Metazoa - 1211; Fungi - 1055; Plants - 600; Viruses - 0; Other Eukaryotes - 947 (source: NCBI BLink). & (gnl|cdd|37014 : 666.0) no description available & (gnl|cdd|31309 : 244.0) no description available & (reliability: 2742.0) & (original description: Putative At5g35970, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF13087;PF13086)' T '28.99' 'DNA.unspecified' 'niben101scf03595_701618-724355' '(at2g02090 : 987.0) ETL1; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 5 (TAIR:AT2G13370.1); Has 19948 Blast hits to 16374 proteins in 2059 species: Archae - 127; Bacteria - 6550; Metazoa - 3755; Fungi - 4012; Plants - 1782; Viruses - 219; Other Eukaryotes - 3503 (source: NCBI BLink). & (gnl|cdd|35610 : 675.0) no description available & (gnl|cdd|30899 : 278.0) no description available & (q7g8y3|isw2_orysa : 182.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1974.0) & (original description: Putative ETL1, Description = Protein CHROMATIN REMODELING 19, PFAM = PF00176;PF00271)' T '28.99' 'DNA.unspecified' 'niben101scf03599_29117-32881' '(at1g12244 : 224.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, nucleic acid binding; INVOLVED IN: DNA repair, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process, DNA recombination, response to DNA damage stimulus; LOCATED IN: endomembrane system, cytoplasm; CONTAINS InterPro DOMAIN/s: Resolvase, RNase H-like fold (InterPro:IPR006641), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Resolvase, holliday junction-type, YqgF-like (InterPro:IPR005227); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative BnaC08g41380D, Description = BnaC08g41380D protein, PFAM = PF03652)' T '28.99' 'DNA.unspecified' 'niben101scf03599_117079-134472' '(at2g45140 : 289.0) Encodes a Plant VAMP-Associated protein that localizes to the ER and binds to the sitosterol-binding protein ORP3a. The WFDE motif in ORP3a appears to be important for this direct interaction. Mutation of this motif causes ORP3a to relocalize to the Golgi and cytosol. The interaction between PVA12 and ORP3a does not appear to be sterol-dependent.; plant VAP homolog 12 (PVA12); FUNCTIONS IN: structural molecule activity; LOCATED IN: cytosol, endoplasmic reticulum, nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: vesicle associated protein (TAIR:AT3G60600.1); Has 1106 Blast hits to 1079 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 441; Fungi - 140; Plants - 434; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|35660 : 127.0) no description available & (gnl|cdd|84916 : 103.0) no description available & (reliability: 572.0) & (original description: Putative PVA12, Description = Vesicle-associated protein 1-2, PFAM = PF00635)' T '28.99' 'DNA.unspecified' 'niben101scf03723_239417-251078' '(at2g32415 : 1043.0) Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: shoot apex; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain (TAIR:AT5G35910.1). & (gnl|cdd|37417 : 267.0) no description available & (gnl|cdd|85567 : 173.0) no description available & (reliability: 2086.0) & (original description: Putative RRP6L3, Description = Protein RRP6-like 3, PFAM = PF01612;PF00570)' T '28.99' 'DNA.unspecified' 'niben101scf03764_430269-434648' '(at5g26940 : 256.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39990 : 139.0) no description available & (gnl|cdd|47785 : 125.0) no description available & (reliability: 512.0) & (original description: Putative DPD1, Description = Exonuclease DPD1, chloroplastic/mitochondrial, PFAM = PF00929)' T '28.99' 'DNA.unspecified' 'niben101scf03860_145484-174804' '(gnl|cdd|36337 : 130.0) no description available & (p03010|trac9_maize : 120.0) Putative AC9 transposase - Zea mays (Maize) & (at3g42170 : 109.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|86928 : 93.8) no description available & (reliability: 218.0) & (original description: Putative PGSC0003DMG400040321, Description = HAT dimerisation, PFAM = PF14372;PF05699)' T '28.99' 'DNA.unspecified' 'niben101scf03917_62856-77151' '(at1g10930 : 1252.0) DNA helicase involved in the maintenance of genome stability by modulation of the DNA damage response and suppression of homologous recombination.; RECQ4A; FUNCTIONS IN: helicase activity, ATP-dependent 3'-5' DNA helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: chromosome organization, response to DNA damage stimulus, double-strand break repair via homologous recombination; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: RECQ helicase L4B (TAIR:AT1G60930.1); Has 34923 Blast hits to 34782 proteins in 2821 species: Archae - 633; Bacteria - 21324; Metazoa - 3687; Fungi - 2728; Plants - 1606; Viruses - 18; Other Eukaryotes - 4927 (source: NCBI BLink). & (gnl|cdd|35572 : 621.0) no description available & (gnl|cdd|30860 : 528.0) no description available & (reliability: 2504.0) & (original description: Putative RECQL4A, Description = ATP-dependent DNA helicase Q-like 4A, PFAM = PF00570;PF16124;PF00270;PF00271;PF09382)' T '28.99' 'DNA.unspecified' 'niben101scf03944_242521-245835' '(gnl|cdd|36337 : 101.0) no description available & (gnl|cdd|86928 : 90.8) no description available & (at3g42170 : 90.5) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (p03010|trac9_maize : 88.2) Putative AC9 transposase - Zea mays (Maize) & (reliability: 181.0) & (original description: Putative BnaC02g23230D, Description = BnaC02g23230D protein, PFAM = PF05699)' T '28.99' 'DNA.unspecified' 'niben101scf03944_673424-676377' '(at3g55560 : 161.0) AT-hook protein of GA feedback 2 (AGF2); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 20 (TAIR:AT4G14465.1); Has 804 Blast hits to 798 proteins in 45 species: Archae - 0; Bacteria - 14; Metazoa - 18; Fungi - 6; Plants - 758; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|86345 : 137.0) no description available & (reliability: 306.0) & (original description: Putative AHL15, Description = AT-hook motif nuclear-localized protein 15, PFAM = PF03479)' T '28.99' 'DNA.unspecified' 'niben101scf03949_794536-799793' '(at1g71260 : 260.0) Encodes WHY2, a homolog of the potato p24 protein. It shares the conserved KGKAAL domain, a putative DNA-binding domain, with potato p24 and is localized to mitochondria and not the nucleus. WHY2 is a member of the Whirly family proteins present mainly in the plant kingdom performing various activities related to DNA metabolism. Crystal structure of Solanum tuberosum WHY2, a close homolog of Arabidopsis WHY2, reveal that Whirly proteins bind to single strand DNA to promote accurate repair of DNA double-strand breaks over an error-prone repair pathway.; WHIRLY 2 (ATWHY2); CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Plant transcription factor (InterPro:IPR013742); BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT1G14410.1); Has 105 Blast hits to 105 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|71964 : 205.0) no description available & (reliability: 520.0) & (original description: Putative WHY2, Description = Single-stranded DNA-bindig protein WHY2, mitochondrial, PFAM = PF08536)' T '28.99' 'DNA.unspecified' 'niben101scf03962_299011-305047' '(at2g24170 : 999.0) Endomembrane protein 70 protein family; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G10840.1); Has 1577 Blast hits to 1550 proteins in 327 species: Archae - 0; Bacteria - 11; Metazoa - 618; Fungi - 234; Plants - 447; Viruses - 0; Other Eukaryotes - 267 (source: NCBI BLink). & (gnl|cdd|36492 : 926.0) no description available & (gnl|cdd|66650 : 676.0) no description available & (reliability: 1998.0) & (original description: Putative TMN10, Description = Transmembrane 9 superfamily member 10, PFAM = PF02990)' T '28.99' 'DNA.unspecified' 'niben101scf03962_300863-303392' '(at2g24170 : 180.0) Endomembrane protein 70 protein family; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G10840.1); Has 1577 Blast hits to 1550 proteins in 327 species: Archae - 0; Bacteria - 11; Metazoa - 618; Fungi - 234; Plants - 447; Viruses - 0; Other Eukaryotes - 267 (source: NCBI BLink). & (gnl|cdd|36492 : 125.0) no description available & (gnl|cdd|66650 : 95.7) no description available & (reliability: 360.0) & (original description: Putative EMP1, Description = Transmembrane 9 superfamily member, PFAM = PF02990)' T '28.99' 'DNA.unspecified' 'niben101scf04001_291425-302244' '(at2g03270 : 975.0) DNA-binding protein, putative; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DNA helicase, putative (InterPro:IPR004483), DEAD-like helicase, N-terminal (InterPro:IPR014001); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G35970.1); Has 6736 Blast hits to 5857 proteins in 1106 species: Archae - 209; Bacteria - 2506; Metazoa - 1275; Fungi - 1034; Plants - 659; Viruses - 7; Other Eukaryotes - 1046 (source: NCBI BLink). & (gnl|cdd|37014 : 697.0) no description available & (gnl|cdd|31309 : 283.0) no description available & (reliability: 1950.0) & (original description: Putative SMBP2, Description = SMBP2, PFAM = PF13087;PF13086)' T '28.99' 'DNA.unspecified' 'niben101scf04078_142697-147617' '(at1g49920 : 135.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (gnl|cdd|72786 : 86.5) no description available & (reliability: 270.0) & (original description: Putative At3g05850, Description = Putative ovule protein, PFAM = PF10551;PF03108;PF00564;PF04434)' T '28.99' 'DNA.unspecified' 'niben101scf04109_497191-507412' '(at1g48650 : 161.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Double-stranded RNA-binding (InterPro:IPR001159), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G01130.1); Has 12982 Blast hits to 8882 proteins in 1499 species: Archae - 14; Bacteria - 5361; Metazoa - 2913; Fungi - 1651; Plants - 997; Viruses - 50; Other Eukaryotes - 1996 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative At1g48650, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = )' T '28.99' 'DNA.unspecified' 'niben101scf04118_391216-395681' '(at3g13610 : 481.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G55290.1); Has 8779 Blast hits to 8731 proteins in 1013 species: Archae - 0; Bacteria - 1145; Metazoa - 121; Fungi - 1057; Plants - 4989; Viruses - 0; Other Eukaryotes - 1467 (source: NCBI BLink). & (gnl|cdd|35365 : 286.0) no description available & (o04847|dv4h_catro : 189.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|33294 : 177.0) no description available & (reliability: 962.0) & (original description: Putative F6'H1, Description = Feruloyl CoA ortho-hydroxylase 1, PFAM = PF14226;PF03171)' T '28.99' 'DNA.unspecified' 'niben101scf04141_1-17230' '(at4g35740 : 844.0) Encodes RECQ3, an ATP-dependent helicase.; RecQl3; FUNCTIONS IN: ATP binding, ATP-dependent helicase activity; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RECQ helicase L2 (TAIR:AT1G31360.1); Has 28158 Blast hits to 28089 proteins in 2765 species: Archae - 286; Bacteria - 16813; Metazoa - 3341; Fungi - 2669; Plants - 1491; Viruses - 10; Other Eukaryotes - 3548 (source: NCBI BLink). & (gnl|cdd|35572 : 503.0) no description available & (gnl|cdd|30860 : 450.0) no description available & (reliability: 1688.0) & (original description: Putative RECQL3, Description = ATP-dependent DNA helicase Q-like 3, PFAM = PF00270;PF00271;PF16124)' T '28.99' 'DNA.unspecified' 'niben101scf04217_50693-56751' '(at3g60600 : 212.0) Encodes VAP27 (for Vesicle-Associated Protein). VAP27 has high homology to the VAP33 family of SNARE-like proteins from animals. May be involved in vesicular transport to or from the ER. Located exclusively in limiting membrane of protein storage vacuoles. Binds SRC2.; VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1 (VAP27-1); FUNCTIONS IN: protein binding; INVOLVED IN: intracellular transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: plant VAP homolog 12 (TAIR:AT2G45140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35660 : 122.0) no description available & (gnl|cdd|84916 : 98.9) no description available & (reliability: 424.0) & (original description: Putative CDS5, Description = Vesicle-associated protein 1-2, PFAM = PF00635)' T '28.99' 'DNA.unspecified' 'niben101scf04276_104983-112515' '(at3g05740 : 791.0) RECQ helicase l1 (RECQI1); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DNA helicase (RECQl4A) (TAIR:AT1G10930.1); Has 22913 Blast hits to 22836 proteins in 2673 species: Archae - 358; Bacteria - 13443; Metazoa - 2936; Fungi - 2132; Plants - 1261; Viruses - 9; Other Eukaryotes - 2774 (source: NCBI BLink). & (gnl|cdd|35572 : 503.0) no description available & (gnl|cdd|30860 : 427.0) no description available & (reliability: 1582.0) & (original description: Putative RECQL1, Description = ATP-dependent DNA helicase Q-like 1, PFAM = PF00271;PF16124;PF00270)' T '28.99' 'DNA.unspecified' 'niben101scf04382_75208-80810' '(at5g13820 : 366.0) Encodes a protein that specifically binds plant telomeric DNA repeats. It has a single Myb telomeric DNA-binding domain in C-terminus that prefers the sequence TTTAGGG.; telomeric DNA binding protein 1 (TBP1); FUNCTIONS IN: DNA binding, double-stranded telomeric DNA binding; INVOLVED IN: telomere maintenance; LOCATED IN: chromosome, telomeric region, nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Ubiquitin supergroup (InterPro:IPR019955), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 9 (TAIR:AT3G12560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 732.0) & (original description: Putative TRP4, Description = Telomere repeat-binding protein 4, PFAM = )' T '28.99' 'DNA.unspecified' 'niben101scf04411_106578-124632' '(at3g57300 : 1681.0) Encodes the Arabidopsis INO80 ortholog of the SWI/SNF ATPase family. Functions as a positive regulator of DNA homologous recombination (HR). In INO80 mutants, the HR frequency is reduced to 15% of that in the wild-type. Mutation in INO80 does not affect sensitivity to genotoxic agents and efficiency of T-DNA integration. INO80 was also shown to regulate a subset of the Arabidopsis transcriptome.; INO80 ortholog (INO80); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: somatic cell DNA recombination, positive regulation of DNA repair, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA binding domain, INO80 (InterPro:IPR020838), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein (TAIR:AT3G12810.1). & (gnl|cdd|35609 : 1188.0) no description available & (gnl|cdd|84584 : 294.0) no description available & (q7g8y3|isw2_orysa : 257.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 3362.0) & (original description: Putative INO80, Description = DNA helicase INO80, PFAM = PF00271;PF13892;PF00176)' T '28.99' 'DNA.unspecified' 'niben101scf04487_70511-86838' '(at1g54490 : 236.0) Involved in the ethylene response. XRN4 does not appear to regulate ethylene signaling via an RNA-INDUCED SILENCING COMPLEX-based RNA silencing mechanism but acts by independent means. Endogenous suppressor of posttranscriptional gene silencing.; exoribonuclease 4 (XRN4); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: 5'-3' exoribonuclease 3 (TAIR:AT1G75660.1); Has 1935 Blast hits to 1539 proteins in 314 species: Archae - 0; Bacteria - 132; Metazoa - 355; Fungi - 561; Plants - 185; Viruses - 14; Other Eukaryotes - 688 (source: NCBI BLink). & (gnl|cdd|37255 : 190.0) no description available & (gnl|cdd|34654 : 145.0) no description available & (reliability: 472.0) & (original description: Putative xrn2, Description = 5'-3' exoribonuclease 2, PFAM = )' T '28.99' 'DNA.unspecified' 'niben101scf04549_982837-985726' '(at1g19260 : 249.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative At1g19260, Description = General transcription factor 2-related zinc finger protein, PFAM = PF14291)' T '28.99' 'DNA.unspecified' 'niben101scf04675_139474-166163' '(at2g25910 : 535.0) 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein; FUNCTIONS IN: 3'-5' exonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37616 : 183.0) no description available & (gnl|cdd|28891 : 103.0) no description available & (reliability: 1070.0) & (original description: Putative BnaA04g15250D, Description = BnaA04g15250D protein, PFAM = PF01612;PF00013)' T '28.99' 'DNA.unspecified' 'niben101scf04724_92741-97602' '(at1g64260 : 114.0) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64255.1); Has 1329 Blast hits to 1275 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1325; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|72786 : 98.5) no description available & (reliability: 220.0) & (original description: Putative SDM1_53t00022, Description = Zinc finger containing preotein, putative, PFAM = PF03108;PF04434;PF10551)' T '28.99' 'DNA.unspecified' 'niben101scf04742_203399-208840' '(at1g55290 : 356.0) encodes a protein whose sequence is similar to oxidoreductase, 2OG-Fe(II) oxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G13610.1); Has 8871 Blast hits to 8831 proteins in 1013 species: Archae - 0; Bacteria - 1149; Metazoa - 118; Fungi - 1068; Plants - 4986; Viruses - 0; Other Eukaryotes - 1550 (source: NCBI BLink). & (gnl|cdd|35365 : 274.0) no description available & (q41452|fls_soltu : 163.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Solanum tuberosum (Potato) & (gnl|cdd|33294 : 163.0) no description available & (reliability: 698.0) & (original description: Putative F6'H2, Description = Feruloyl CoA ortho-hydroxylase 2, PFAM = PF03171;PF14226)' T '28.99' 'DNA.unspecified' 'niben101scf04827_38616-41239' '(gnl|cdd|39574 : 98.6) no description available & (at3g12410 : 92.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G12460.1); Has 208 Blast hits to 196 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 197; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative Os01g0300000, Description = Os01g0300000 protein, PFAM = PF01612)' T '28.99' 'DNA.unspecified' 'niben101scf04905_52938-65915' '(at1g27880 : 867.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein (TAIR:AT4G35740.1); Has 41244 Blast hits to 39032 proteins in 2984 species: Archae - 762; Bacteria - 21282; Metazoa - 5401; Fungi - 4173; Plants - 3671; Viruses - 588; Other Eukaryotes - 5367 (source: NCBI BLink). & (gnl|cdd|35572 : 407.0) no description available & (gnl|cdd|30860 : 333.0) no description available & (reliability: 1734.0) & (original description: Putative RECQL5, Description = ATP-dependent DNA helicase Q-like 5, PFAM = PF00271;PF00270)' T '28.99' 'DNA.unspecified' 'niben101scf04953_406378-413576' '(at5g67240 : 406.0) small RNA degrading nuclease 3 (SDN3); FUNCTIONS IN: exonuclease activity, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: small RNA degrading nuclease 1 (TAIR:AT3G50100.1). & (gnl|cdd|37459 : 230.0) no description available & (gnl|cdd|47785 : 106.0) no description available & (reliability: 812.0) & (original description: Putative SDN1, Description = Small RNA degrading nuclease 1, PFAM = PF00929)' T '28.99' 'DNA.unspecified' 'niben101scf04953_406830-412227' '(at5g67240 : 279.0) small RNA degrading nuclease 3 (SDN3); FUNCTIONS IN: exonuclease activity, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: small RNA degrading nuclease 1 (TAIR:AT3G50100.1). & (gnl|cdd|37459 : 159.0) no description available & (reliability: 558.0) & (original description: Putative SDN1, Description = Small RNA degrading nuclease 3, PFAM = PF00929)' T '28.99' 'DNA.unspecified' 'niben101scf04992_193161-196539' '(at2g33845 : 168.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT4G28440.1); Has 251 Blast hits to 251 proteins in 51 species: Archae - 23; Bacteria - 0; Metazoa - 2; Fungi - 4; Plants - 168; Viruses - 30; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative At1g10590, Description = DNA-binding family protein, PFAM = )' T '28.99' 'DNA.unspecified' 'niben101scf05053_8160-14294' '(at5g63190 : 978.0) MA3 domain-containing protein; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MA3 domain-containing protein (TAIR:AT3G48390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35624 : 908.0) no description available & (gnl|cdd|86147 : 122.0) no description available & (reliability: 1956.0) & (original description: Putative At1g22730, Description = MA3 domain-containing protein, PFAM = PF02847;PF02847;PF02847;PF02847)' T '28.99' 'DNA.unspecified' 'niben101scf05151_316574-319563' '(gnl|cdd|36337 : 126.0) no description available & (at3g42170 : 102.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (p08770|tra1_maize : 95.9) Putative AC transposase (ORFA) - Zea mays (Maize) & (reliability: 204.0) & (original description: Putative PGSC0003DMG400016410, Description = , PFAM = PF14372)' T '28.99' 'DNA.unspecified' 'niben101scf05160_13622-18661' '(at4g13870 : 231.0) Encodes a protein with homology to the exonuclease domain of hWRN-p of human protein Werner Syndrome Exonuclease (WEX). Forms a complex with the heterodimeric factor Ku. The interaction with KU stimulates WEX exonuclease activity.; Werner syndrome-like exonuclease (WRNEXO); FUNCTIONS IN: protein binding, 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT4G13885.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39574 : 120.0) no description available & (gnl|cdd|85567 : 83.4) no description available & (reliability: 462.0) & (original description: Putative WEX, Description = Werner Syndrome-like exonuclease, PFAM = PF01612)' T '28.99' 'DNA.unspecified' 'niben101scf05226_127037-129675' '(gnl|cdd|39574 : 95.5) no description available & (at4g13870 : 92.8) Encodes a protein with homology to the exonuclease domain of hWRN-p of human protein Werner Syndrome Exonuclease (WEX). Forms a complex with the heterodimeric factor Ku. The interaction with KU stimulates WEX exonuclease activity.; Werner syndrome-like exonuclease (WRNEXO); FUNCTIONS IN: protein binding, 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT4G13885.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 185.6) & (original description: Putative Os01g0660800, Description = Os01g0660800 protein, PFAM = PF01612)' T '28.99' 'DNA.unspecified' 'niben101scf05272_347691-353167' '(at3g13772 : 1057.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis. Overexpression of this protein in yeast alters copper and zinc homeostasis.; transmembrane nine 7 (TMN7); INVOLVED IN: cellular copper ion homeostasis, cellular zinc ion homeostasis; LOCATED IN: integral to membrane, Golgi apparatus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT1G55130.1); Has 1568 Blast hits to 1544 proteins in 321 species: Archae - 0; Bacteria - 1; Metazoa - 615; Fungi - 232; Plants - 456; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|36492 : 930.0) no description available & (gnl|cdd|66650 : 671.0) no description available & (reliability: 2054.0) & (original description: Putative TMN7, Description = Transmembrane 9 superfamily member 7, PFAM = PF02990)' T '28.99' 'DNA.unspecified' 'niben101scf05402_195873-201166' '(at4g28190 : 313.0) Encodes a novel Cys-rich protein with a B-box like domain that acts as a negative regulator of meristem cell accumulation in inflorescence and floral meristems as loss-of-function ult1 mutations cause inflorescence meristem enlargement, the production of extra flowers and floral organs, and a decrease in floral meristem determinacy. Acts opposite to CLF which represses AG, but preventing deposition of CLF repressive methylation marks.; ULTRAPETALA1 (ULT1); INVOLVED IN: regulation of floral meristem growth, meristem determinacy, regulation of inflorescence meristem growth, floral meristem determinacy; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 19 growth stages; CONTAINS InterPro DOMAIN/s: Developmental regulator, ULTRAPETALA (InterPro:IPR020533); BEST Arabidopsis thaliana protein match is: Developmental regulator, ULTRAPETALA (TAIR:AT2G20825.1). & (reliability: 588.0) & (original description: Putative ULT1, Description = Protein ULTRAPETALA 1, PFAM = PF01342)' T '28.99' 'DNA.unspecified' 'niben101scf05413_647818-650502' '(gnl|cdd|36337 : 116.0) no description available & (at3g42170 : 95.5) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (p08770|tra1_maize : 95.5) Putative AC transposase (ORFA) - Zea mays (Maize) & (gnl|cdd|86928 : 95.0) no description available & (reliability: 191.0) & (original description: Putative BnaA02g11320D, Description = BnaA02g11320D protein, PFAM = PF05699;PF14372)' T '28.99' 'DNA.unspecified' 'niben101scf05434_230789-263559' '(at2g01440 : 1171.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: ATP-dependent DNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA repair, DNA recombination; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA helicase, ATP-dependent, RecG (InterPro:IPR004609), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box helicase, putative (TAIR:AT3G02060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31393 : 595.0) no description available & (gnl|cdd|35565 : 235.0) no description available & (reliability: 2342.0) & (original description: Putative RECG, Description = ATP-dependent DNA helicase homolog RECG, chloroplastic, PFAM = PF00271;PF00270)' T '28.99' 'DNA.unspecified' 'niben101scf05468_73312-128599' '(at3g52050 : 473.0) 5'-3' exonuclease family protein; FUNCTIONS IN: 5'-3' exonuclease activity, DNA binding, catalytic activity; CONTAINS InterPro DOMAIN/s: 5'-3' exonuclease, SAM-fold domain (InterPro:IPR020047), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), 5'-3' exonuclease, N-terminal (InterPro:IPR002421), 5'-3' exonuclease, N-terminal resolvase-like domain (InterPro:IPR020046), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G34380.2); Has 9778 Blast hits to 9773 proteins in 2548 species: Archae - 3; Bacteria - 6175; Metazoa - 3; Fungi - 2; Plants - 105; Viruses - 32; Other Eukaryotes - 3458 (source: NCBI BLink). & (gnl|cdd|47781 : 270.0) no description available & (reliability: 946.0) & (original description: Putative At3g52050, Description = 5'-3' exonuclease family protein, PFAM = PF02739;PF01367)' T '28.99' 'DNA.unspecified' 'niben101scf05468_91571-101652' '(at3g52050 : 141.0) 5'-3' exonuclease family protein; FUNCTIONS IN: 5'-3' exonuclease activity, DNA binding, catalytic activity; CONTAINS InterPro DOMAIN/s: 5'-3' exonuclease, SAM-fold domain (InterPro:IPR020047), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), 5'-3' exonuclease, N-terminal (InterPro:IPR002421), 5'-3' exonuclease, N-terminal resolvase-like domain (InterPro:IPR020046), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G34380.2); Has 9778 Blast hits to 9773 proteins in 2548 species: Archae - 3; Bacteria - 6175; Metazoa - 3; Fungi - 2; Plants - 105; Viruses - 32; Other Eukaryotes - 3458 (source: NCBI BLink). & (gnl|cdd|47781 : 116.0) no description available & (reliability: 282.0) & (original description: Putative At3g52050, Description = 5'-3' exonuclease family protein, PFAM = PF02739)' T '28.99' 'DNA.unspecified' 'niben101scf05750_530279-537292' '(at5g63460 : 132.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), Ubiquitin ligase, Det1/DDB1-complexing (InterPro:IPR018276). & (reliability: 264.0) & (original description: Putative MTR_4g103580, Description = Det1 complexing ubiquitin ligase, PFAM = PF02037;PF10172)' T '28.99' 'DNA.unspecified' 'niben101scf05800_163535-195519' '(at2g25170 : 1680.0) Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1. Is an extragenic suppressor of slr2 (SSL2). Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1. It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.; PICKLE (PKL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF1086 (InterPro:IPR009462), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor, putative (TAIR:AT4G31900.1); Has 20234 Blast hits to 17178 proteins in 1958 species: Archae - 161; Bacteria - 5176; Metazoa - 5098; Fungi - 4334; Plants - 1876; Viruses - 134; Other Eukaryotes - 3455 (source: NCBI BLink). & (gnl|cdd|35605 : 721.0) no description available & (q7g8y3|isw2_orysa : 394.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|30899 : 310.0) no description available & (reliability: 3360.0) & (original description: Putative PKL, Description = CHD3-type chromatin-remodeling factor PICKLE, PFAM = PF00628;PF08074;PF00176;PF00271;PF00385;PF00385;PF06461;PF06465)' T '28.99' 'DNA.unspecified' 'niben101scf05811_19496-63560' '(at3g46960 : 1945.0) RNA helicase, ATP-dependent, SK12/DOB1 protein; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT1G59760.1); Has 10417 Blast hits to 7271 proteins in 1110 species: Archae - 777; Bacteria - 3025; Metazoa - 1455; Fungi - 1476; Plants - 602; Viruses - 48; Other Eukaryotes - 3034 (source: NCBI BLink). & (gnl|cdd|36165 : 1316.0) no description available & (gnl|cdd|34219 : 706.0) no description available & (reliability: 3890.0) & (original description: Putative SKI2, Description = DExH-box ATP-dependent RNA helicase DExH11, PFAM = PF13234;PF00270;PF00271;PF08148)' T '28.99' 'DNA.unspecified' 'niben101scf06016_207426-210288' '(at4g39810 : 320.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT1G74390.1); Has 1538 Blast hits to 1532 proteins in 632 species: Archae - 0; Bacteria - 1272; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (gnl|cdd|47785 : 98.5) no description available & (reliability: 640.0) & (original description: Putative NEN4, Description = Protein NEN4, PFAM = PF00929)' T '28.99' 'DNA.unspecified' 'niben101scf06154_99066-104656' '(at1g71260 : 243.0) Encodes WHY2, a homolog of the potato p24 protein. It shares the conserved KGKAAL domain, a putative DNA-binding domain, with potato p24 and is localized to mitochondria and not the nucleus. WHY2 is a member of the Whirly family proteins present mainly in the plant kingdom performing various activities related to DNA metabolism. Crystal structure of Solanum tuberosum WHY2, a close homolog of Arabidopsis WHY2, reveal that Whirly proteins bind to single strand DNA to promote accurate repair of DNA double-strand breaks over an error-prone repair pathway.; WHIRLY 2 (ATWHY2); CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Plant transcription factor (InterPro:IPR013742); BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT1G14410.1); Has 105 Blast hits to 105 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|71964 : 203.0) no description available & (reliability: 486.0) & (original description: Putative WHY2, Description = Single-stranded DNA-bindig protein WHY2, mitochondrial, PFAM = PF08536)' T '28.99' 'DNA.unspecified' 'niben101scf06156_447261-454936' '(at5g25100 : 998.0) Endomembrane protein 70 protein family; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G10840.1). & (gnl|cdd|36492 : 897.0) no description available & (gnl|cdd|66650 : 668.0) no description available & (reliability: 1950.0) & (original description: Putative TMN8, Description = Transmembrane 9 superfamily member 8, PFAM = PF02990)' T '28.99' 'DNA.unspecified' 'niben101scf06200_291598-295943' '(at4g28440 : 177.0) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G33845.1); Has 214 Blast hits to 214 proteins in 47 species: Archae - 22; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative At4g28440, Description = Uncharacterized protein At4g28440, PFAM = )' T '28.99' 'DNA.unspecified' 'niben101scf06203_97371-109838' '(at4g34490 : 663.0) CYCLASE ASSOCIATED PROTEIN; cyclase associated protein 1 (CAP1); CONTAINS InterPro DOMAIN/s: Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal (InterPro:IPR016098), CAP, conserved site (InterPro:IPR018106), Adenylate cyclase-associated CAP (InterPro:IPR001837), CARP motif (InterPro:IPR006599), Adenylate cyclase-associated CAP, N-terminal (InterPro:IPR013992), C-CAP/cofactor C-like domain (InterPro:IPR017901), Adenylate cyclase-associated CAP, C-terminal (InterPro:IPR013912); Has 618 Blast hits to 612 proteins in 211 species: Archae - 0; Bacteria - 2; Metazoa - 296; Fungi - 160; Plants - 51; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (gnl|cdd|37886 : 494.0) no description available & (gnl|cdd|85310 : 209.0) no description available & (reliability: 1326.0) & (original description: Putative CAP1, Description = Cyclase-associated protein 1, PFAM = PF01213;PF08603)' T '28.99' 'DNA.unspecified' 'niben101scf06369_296299-305587' '(at1g63470 : 161.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT1G63480.1); Has 999 Blast hits to 995 proteins in 66 species: Archae - 0; Bacteria - 22; Metazoa - 171; Fungi - 26; Plants - 768; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|86345 : 119.0) no description available & (reliability: 312.0) & (original description: Putative AHL5, Description = AT-hook motif nuclear-localized protein 5, PFAM = PF03479)' T '28.99' 'DNA.unspecified' 'niben101scf06618_118346-129810' '(at2g25910 : 409.0) 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein; FUNCTIONS IN: 3'-5' exonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37616 : 154.0) no description available & (gnl|cdd|28891 : 95.1) no description available & (reliability: 818.0) & (original description: Putative PGSC0003DMG401002514, Description = Exonuclease 3'-5' domain-containing protein 1, PFAM = PF01612)' T '28.99' 'DNA.unspecified' 'niben101scf06822_215350-219125' '(at4g17800 : 241.0) Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT2G35270.1); Has 956 Blast hits to 951 proteins in 109 species: Archae - 0; Bacteria - 110; Metazoa - 54; Fungi - 9; Plants - 764; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|86345 : 136.0) no description available & (reliability: 466.0) & (original description: Putative AHL21, Description = AT-hook motif nuclear-localized protein 21, PFAM = PF03479)' T '28.99' 'DNA.unspecified' 'niben101scf06976_720001-724036' '(at3g42170 : 624.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|36337 : 377.0) no description available & (p08770|tra1_maize : 272.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (gnl|cdd|86928 : 97.7) no description available & (reliability: 1248.0) & (original description: Putative HAT, Description = Zinc finger BED domain-containing protein DAYSLEEPER, PFAM = PF05699;PF14372;PF02892)' T '28.99' 'DNA.unspecified' 'niben101scf07008_222396-227100' '(at2g26970 : 277.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38452 : 250.0) no description available & (gnl|cdd|81545 : 234.0) no description available & (reliability: 554.0) & (original description: Putative orn, Description = Oligoribonuclease, PFAM = PF00929)' T '28.99' 'DNA.unspecified' 'niben101scf07231_193045-202198' '(at5g61390 : 486.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT5G07710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47785 : 106.0) no description available & (reliability: 972.0) & (original description: Putative NEN2, Description = Protein NEN2, PFAM = PF00929)' T '28.99' 'DNA.unspecified' 'niben101scf07402_198002-204290' '(at2g01970 : 946.0) Endomembrane protein 70 protein family; INVOLVED IN: transport; LOCATED IN: integral to membrane, Golgi apparatus, plasma membrane, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT1G14670.1); Has 1574 Blast hits to 1528 proteins in 319 species: Archae - 0; Bacteria - 2; Metazoa - 611; Fungi - 238; Plants - 459; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|36491 : 871.0) no description available & (gnl|cdd|66650 : 614.0) no description available & (reliability: 1860.0) & (original description: Putative TMN3, Description = Transmembrane 9 superfamily member 3, PFAM = PF02990)' T '28.99' 'DNA.unspecified' 'niben101scf07563_65822-74313' '(at4g35220 : 400.0) Cyclase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Putative cyclase (InterPro:IPR007325); BEST Arabidopsis thaliana protein match is: Cyclase family protein (TAIR:AT1G44542.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86574 : 123.0) no description available & (reliability: 800.0) & (original description: Putative At4g35220, Description = AT4g35220/F23E12_220, PFAM = PF04199)' T '28.99' 'DNA.unspecified' 'niben101scf07590_410909-450737' '(gnl|cdd|37255 : 868.0) no description available & (at1g54490 : 848.0) Involved in the ethylene response. XRN4 does not appear to regulate ethylene signaling via an RNA-INDUCED SILENCING COMPLEX-based RNA silencing mechanism but acts by independent means. Endogenous suppressor of posttranscriptional gene silencing.; exoribonuclease 4 (XRN4); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: 5'-3' exoribonuclease 3 (TAIR:AT1G75660.1); Has 1935 Blast hits to 1539 proteins in 314 species: Archae - 0; Bacteria - 132; Metazoa - 355; Fungi - 561; Plants - 185; Viruses - 14; Other Eukaryotes - 688 (source: NCBI BLink). & (gnl|cdd|34654 : 436.0) no description available & (reliability: 1696.0) & (original description: Putative xrn2, Description = 5'-3' exoribonuclease 4, PFAM = PF03159)' T '28.99' 'DNA.unspecified' 'niben101scf07590_445081-450988' '(at1g54490 : 199.0) Involved in the ethylene response. XRN4 does not appear to regulate ethylene signaling via an RNA-INDUCED SILENCING COMPLEX-based RNA silencing mechanism but acts by independent means. Endogenous suppressor of posttranscriptional gene silencing.; exoribonuclease 4 (XRN4); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: 5'-3' exoribonuclease 3 (TAIR:AT1G75660.1); Has 1935 Blast hits to 1539 proteins in 314 species: Archae - 0; Bacteria - 132; Metazoa - 355; Fungi - 561; Plants - 185; Viruses - 14; Other Eukaryotes - 688 (source: NCBI BLink). & (gnl|cdd|37255 : 162.0) no description available & (gnl|cdd|34654 : 117.0) no description available & (reliability: 398.0) & (original description: Putative AIN1, Description = 5'-3' exoribonuclease 4, PFAM = )' T '28.99' 'DNA.unspecified' 'niben101scf07984_190040-194778' '(at1g01150 : 84.7) Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: TRF-like 10 (TAIR:AT5G03780.1); Has 94 Blast hits to 77 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative At1g01150, Description = BnaA06g30300D protein, PFAM = )' T '28.99' 'DNA.unspecified' 'niben101scf08011_19202-30406' '(at1g14670 : 689.0) Endomembrane protein 70 protein family; INVOLVED IN: transport; LOCATED IN: integral to membrane, Golgi apparatus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT2G01970.1); Has 1574 Blast hits to 1525 proteins in 319 species: Archae - 0; Bacteria - 2; Metazoa - 610; Fungi - 249; Plants - 451; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (gnl|cdd|36491 : 683.0) no description available & (gnl|cdd|66650 : 512.0) no description available & (reliability: 1334.0) & (original description: Putative sigC, Description = Transmembrane 9 superfamily member, PFAM = PF02990)' T '28.99' 'DNA.unspecified' 'niben101scf08478_563778-566302' '(gnl|cdd|36337 : 107.0) no description available & (gnl|cdd|86928 : 102.0) no description available & (p03010|trac9_maize : 98.2) Putative AC9 transposase - Zea mays (Maize) & (at3g42170 : 85.5) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative Sb04g019795, Description = Putative uncharacterized protein Sb04g019795, PFAM = PF05699)' T '28.99' 'DNA.unspecified' 'niben101scf08590_264720-272033' '(at5g24340 : 611.0) 3'-5' exonuclease domain-containing protein; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF82 (InterPro:IPR002782), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT1G56310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37418 : 224.0) no description available & (gnl|cdd|31842 : 104.0) no description available & (reliability: 1222.0) & (original description: Putative At5g24340, Description = 3'-5' exonuclease domain-containing protein, PFAM = PF01612;PF01927)' T '28.99' 'DNA.unspecified' 'niben101scf08653_158925-178568' '(at1g48650 : 1571.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Double-stranded RNA-binding (InterPro:IPR001159), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G01130.1); Has 12982 Blast hits to 8882 proteins in 1499 species: Archae - 14; Bacteria - 5361; Metazoa - 2913; Fungi - 1651; Plants - 997; Viruses - 50; Other Eukaryotes - 1996 (source: NCBI BLink). & (gnl|cdd|36138 : 966.0) no description available & (gnl|cdd|31829 : 463.0) no description available & (reliability: 3142.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF00270;PF04408;PF00271;PF07717;PF00035)' T '28.99' 'DNA.unspecified' 'niben101scf08665_378148-383588' '(at2g45850 : 173.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT3G61310.1); Has 793 Blast hits to 789 proteins in 47 species: Archae - 0; Bacteria - 4; Metazoa - 23; Fungi - 13; Plants - 747; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|86345 : 131.0) no description available & (reliability: 346.0) & (original description: Putative AHL9, Description = AT-hook motif nuclear-localized protein 9, PFAM = PF03479)' T '28.99' 'DNA.unspecified' 'niben101scf09189_173621-176567' '(at2g45430 : 222.0) Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.; AT-hook motif nuclear-localized protein 22 (AHL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 18 (TAIR:AT3G60870.1); Has 823 Blast hits to 817 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 6; Plants - 766; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86345 : 139.0) no description available & (reliability: 444.0) & (original description: Putative AHL22, Description = AT-hook motif nuclear-localized protein 22, PFAM = PF03479)' T '28.99' 'DNA.unspecified' 'niben101scf09268_32114-40148' '(at4g34490 : 619.0) CYCLASE ASSOCIATED PROTEIN; cyclase associated protein 1 (CAP1); CONTAINS InterPro DOMAIN/s: Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal (InterPro:IPR016098), CAP, conserved site (InterPro:IPR018106), Adenylate cyclase-associated CAP (InterPro:IPR001837), CARP motif (InterPro:IPR006599), Adenylate cyclase-associated CAP, N-terminal (InterPro:IPR013992), C-CAP/cofactor C-like domain (InterPro:IPR017901), Adenylate cyclase-associated CAP, C-terminal (InterPro:IPR013912); Has 618 Blast hits to 612 proteins in 211 species: Archae - 0; Bacteria - 2; Metazoa - 296; Fungi - 160; Plants - 51; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (gnl|cdd|37886 : 487.0) no description available & (gnl|cdd|85310 : 202.0) no description available & (reliability: 1238.0) & (original description: Putative cap1, Description = Adenylyl cyclase-associated protein, PFAM = PF08603;PF01213)' T '28.99' 'DNA.unspecified' 'niben101scf09416_126132-134771' '(at2g45850 : 100.0) AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT3G61310.1); Has 793 Blast hits to 789 proteins in 47 species: Archae - 0; Bacteria - 4; Metazoa - 23; Fungi - 13; Plants - 747; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative , Description = , PFAM = PF03479)' T '28.99' 'DNA.unspecified' 'niben101scf09552_153854-156833' '(gnl|cdd|39574 : 114.0) no description available & (at2g36110 : 104.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G12460.1); Has 463 Blast hits to 452 proteins in 93 species: Archae - 0; Bacteria - 28; Metazoa - 189; Fungi - 6; Plants - 216; Viruses - 3; Other Eukaryotes - 21 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative Sb03g030190, Description = Putative uncharacterized protein Sb03g030190, PFAM = PF01612)' T '28.99' 'DNA.unspecified' 'niben101scf09767_108148-112506' '(at1g49920 : 88.2) MuDR family transposase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527), Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: MuDR family transposase (TAIR:AT1G64260.1); Has 26408 Blast hits to 9010 proteins in 522 species: Archae - 72; Bacteria - 1697; Metazoa - 8826; Fungi - 3151; Plants - 2780; Viruses - 610; Other Eukaryotes - 9272 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative , Description = , PFAM = PF03108;PF04434)' T '28.99' 'DNA.unspecified' 'niben101scf09773_185987-191367' '(at5g13820 : 384.0) Encodes a protein that specifically binds plant telomeric DNA repeats. It has a single Myb telomeric DNA-binding domain in C-terminus that prefers the sequence TTTAGGG.; telomeric DNA binding protein 1 (TBP1); FUNCTIONS IN: DNA binding, double-stranded telomeric DNA binding; INVOLVED IN: telomere maintenance; LOCATED IN: chromosome, telomeric region, nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Ubiquitin supergroup (InterPro:IPR019955), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 9 (TAIR:AT3G12560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 768.0) & (original description: Putative TRP4, Description = Telomere repeat-binding protein 4, PFAM = )' T '28.99' 'DNA.unspecified' 'niben101scf09811_25231-29634' '(at1g52950 : 91.7) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Protein of unknown function DUF223 (InterPro:IPR003871), Replication factor A, C-terminal (InterPro:IPR013955); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G05642.1); Has 1159 Blast hits to 1070 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 144; Plants - 865; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (gnl|cdd|72948 : 91.1) no description available & (reliability: 183.4) & (original description: Putative , Description = , PFAM = PF08646)' T '28.99' 'DNA.unspecified' 'niben101scf10202_21837-27197' '(at3g61620 : 362.0) exonuclease RRP41 (RRP41); RRP41; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: 3'-5'-exoribonuclease family protein (TAIR:AT4G27490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36286 : 293.0) no description available & (gnl|cdd|81244 : 260.0) no description available & (reliability: 724.0) & (original description: Putative RRP41, Description = Exosome complex component RRP41 homolog, PFAM = PF03725;PF01138)' T '28.99' 'DNA.unspecified' 'niben101scf10202_23446-27044' '(at3g61620 : 171.0) exonuclease RRP41 (RRP41); RRP41; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: 3'-5'-exoribonuclease family protein (TAIR:AT4G27490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36286 : 162.0) no description available & (gnl|cdd|81244 : 154.0) no description available & (reliability: 342.0) & (original description: Putative rph, Description = Exosome complex component Rrp41, PFAM = PF01138)' T '28.99' 'DNA.unspecified' 'niben101scf10381_111446-128508' '(at1g22260 : 461.0) One of two nearly identical proteins (ZYP1b) identified by similarity to transverse filament (TF) proteins. These proteins are involved in chromosome synapsis during meiosis I and localize to the synaptonemal complex (SC). Single mutants have reduced fertility and double mutants (induced by RNAi) have severely reduced fertility.; ZYP1a; BEST Arabidopsis thaliana protein match is: Myosin heavy chain-related protein (TAIR:AT1G22275.1); Has 173955 Blast hits to 88084 proteins in 3391 species: Archae - 2245; Bacteria - 35093; Metazoa - 72717; Fungi - 13338; Plants - 8123; Viruses - 835; Other Eukaryotes - 41604 (source: NCBI BLink). & (gnl|cdd|35383 : 90.3) no description available & (reliability: 894.0) & (original description: Putative ZEP1, Description = Synaptonemal complex protein 1, PFAM = )' T '28.99' 'DNA.unspecified' 'niben101scf10431_113236-120554' '(gnl|cdd|35762 : 212.0) no description available & (gnl|cdd|34623 : 122.0) no description available & (at3g15140 : 82.8) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); Has 576 Blast hits to 576 proteins in 123 species: Archae - 0; Bacteria - 44; Metazoa - 336; Fungi - 16; Plants - 80; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative eri2, Description = ERI1 exoribonuclease 2, PFAM = PF00929)' T '28.99' 'DNA.unspecified' 'niben101scf10502_68689-72582' '(at1g55290 : 453.0) encodes a protein whose sequence is similar to oxidoreductase, 2OG-Fe(II) oxygenase; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G13610.1); Has 8871 Blast hits to 8831 proteins in 1013 species: Archae - 0; Bacteria - 1149; Metazoa - 118; Fungi - 1068; Plants - 4986; Viruses - 0; Other Eukaryotes - 1550 (source: NCBI BLink). & (gnl|cdd|35365 : 284.0) no description available & (o04847|dv4h_catro : 186.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|33294 : 170.0) no description available & (reliability: 906.0) & (original description: Putative F6'H1, Description = Feruloyl CoA ortho-hydroxylase 1, PFAM = PF14226;PF03171)' T '28.99' 'DNA.unspecified' 'niben101scf10608_281081-286176' '(at4g13870 : 235.0) Encodes a protein with homology to the exonuclease domain of hWRN-p of human protein Werner Syndrome Exonuclease (WEX). Forms a complex with the heterodimeric factor Ku. The interaction with KU stimulates WEX exonuclease activity.; Werner syndrome-like exonuclease (WRNEXO); FUNCTIONS IN: protein binding, 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT4G13885.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39574 : 119.0) no description available & (gnl|cdd|47780 : 80.5) no description available & (reliability: 470.0) & (original description: Putative WEX, Description = Werner Syndrome-like exonuclease, PFAM = PF01612)' T '28.99' 'DNA.unspecified' 'niben101scf12361_421336-428514' '(at5g67240 : 299.0) small RNA degrading nuclease 3 (SDN3); FUNCTIONS IN: exonuclease activity, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: small RNA degrading nuclease 1 (TAIR:AT3G50100.1). & (gnl|cdd|37459 : 187.0) no description available & (gnl|cdd|47785 : 107.0) no description available & (reliability: 598.0) & (original description: Putative SDN4, Description = Putative small RNA degrading nuclease 4, PFAM = PF00929)' T '28.99' 'DNA.unspecified' 'niben101scf12628_154887-170194' '(at2g25910 : 535.0) 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein; FUNCTIONS IN: 3'-5' exonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37616 : 183.0) no description available & (gnl|cdd|28891 : 102.0) no description available & (reliability: 1070.0) & (original description: Putative BnaA04g15250D, Description = BnaA04g15250D protein, PFAM = PF00013;PF01612)' T '28.99' 'DNA.unspecified' 'niben101scf12754_118022-121543' '(gnl|cdd|86928 : 95.0) no description available & (gnl|cdd|36337 : 93.0) no description available & (p03010|trac9_maize : 85.1) Putative AC9 transposase - Zea mays (Maize) & (at3g42170 : 81.6) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative BnaA02g11320D, Description = HAT family dimerisation domain containing protein, PFAM = PF05699)' T '28.99' 'DNA.unspecified' 'niben101scf12928_146945-151031' '(at5g42700 : 191.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G19184.1); Has 276 Blast hits to 264 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 271; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative At5g42700, Description = B3 domain-containing protein At5g42700, PFAM = PF02362)' T '28.99' 'DNA.unspecified' 'niben101scf12983_138970-149038' '(at5g35970 : 1361.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, DNA binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1); Has 6377 Blast hits to 5712 proteins in 1082 species: Archae - 188; Bacteria - 2376; Metazoa - 1211; Fungi - 1055; Plants - 600; Viruses - 0; Other Eukaryotes - 947 (source: NCBI BLink). & (gnl|cdd|37014 : 658.0) no description available & (gnl|cdd|31309 : 244.0) no description available & (reliability: 2722.0) & (original description: Putative At5g35970, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF13086;PF13087)' T '28.99' 'DNA.unspecified' 'niben101scf13601_43974-78447' '(at2g01130 : 1509.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G48650.2); Has 13137 Blast hits to 8990 proteins in 1526 species: Archae - 10; Bacteria - 5358; Metazoa - 2929; Fungi - 1766; Plants - 978; Viruses - 93; Other Eukaryotes - 2003 (source: NCBI BLink). & (gnl|cdd|36138 : 963.0) no description available & (gnl|cdd|83738 : 325.0) no description available & (reliability: 2850.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF00035;PF00271;PF07717;PF04408;PF00270)' T '28.99' 'DNA.unspecified' 'niben101scf13601_44210-67615' '(at2g01130 : 1176.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G48650.2); Has 13137 Blast hits to 8990 proteins in 1526 species: Archae - 10; Bacteria - 5358; Metazoa - 2929; Fungi - 1766; Plants - 978; Viruses - 93; Other Eukaryotes - 2003 (source: NCBI BLink). & (gnl|cdd|36138 : 868.0) no description available & (gnl|cdd|83738 : 310.0) no description available & (reliability: 2210.0) & (original description: Putative dhx36, Description = Putative ATP-dependent RNA helicase DHX36, PFAM = PF00270;PF00271;PF04408;PF07717)' T '28.99' 'DNA.unspecified' 'niben101scf14564_15160-19514' '(at3g42170 : 820.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|36337 : 397.0) no description available & (p08770|tra1_maize : 279.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (gnl|cdd|86928 : 106.0) no description available & (reliability: 1640.0) & (original description: Putative HAT, Description = Zinc finger BED domain-containing protein DAYSLEEPER, PFAM = PF05699;PF02892;PF14372)' T '28.99' 'DNA.unspecified' 'niben101scf17730_2564-26533' '(at2g30800 : 1301.0) Has RNA or DNA helicase activity and expressed specifically in tapetum and vascular tissue. First identified member of a new group of the mle helicase group of the DEAH family.; helicase in vascular tissue and tapetum (HVT1); CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Ankyrin repeat-containing domain (InterPro:IPR020683), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Single-stranded nucleic acid binding R3H (InterPro:IPR001374), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: nuclear DEIH-boxhelicase (TAIR:AT1G06670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36138 : 465.0) no description available & (gnl|cdd|31829 : 274.0) no description available & (reliability: 2344.0) & (original description: Putative HVT1, Description = DExH-box ATP-dependent RNA helicase DExH6, PFAM = PF04408;PF00271;PF01424)' T '28.99' 'DNA.unspecified' 'niben101scf18985_82998-86393' '(gnl|cdd|36337 : 234.0) no description available & (p08770|tra1_maize : 196.0) Putative AC transposase (ORFA) - Zea mays (Maize) & (at3g42170 : 182.0) transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.; BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|86928 : 103.0) no description available & (reliability: 364.0) & (original description: Putative Os11g0613900, Description = 93317-95488, PFAM = PF05699;PF14372)' T '28.99' 'DNA.unspecified' 'niben101scf19230_120956-126206' '(at5g63460 : 97.4) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), Ubiquitin ligase, Det1/DDB1-complexing (InterPro:IPR018276). & (reliability: 194.8) & (original description: Putative BnaC02g42530D, Description = BnaC02g42530D protein, PFAM = PF02037)' T '28.99' 'DNA.unspecified' 'niben101scf20097_72256-80958' '(at2g21520 : 872.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36684 : 276.0) no description available & (gnl|cdd|84928 : 137.0) no description available & (reliability: 1744.0) & (original description: Putative SFH8, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH8, PFAM = PF00650;PF03765)' T '28.99' 'DNA.unspecified' 'niben101scf25633_70475-87017' '(gnl|cdd|30860 : 523.0) no description available & (gnl|cdd|35572 : 419.0) no description available & (at1g60930 : 313.0) AtRECQ4B mutant showed no sensitivity to DNA damaging agents.Involved in homologous recombination.; RECQ helicase L4B (RECQ4B); FUNCTIONS IN: in 8 functions; INVOLVED IN: DNA recombination; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), HRDC-like (InterPro:IPR010997), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: DNA helicase (RECQl4A) (TAIR:AT1G10930.1); Has 28171 Blast hits to 28052 proteins in 2731 species: Archae - 327; Bacteria - 17551; Metazoa - 2839; Fungi - 1949; Plants - 1368; Viruses - 5; Other Eukaryotes - 4132 (source: NCBI BLink). & (reliability: 624.0) & (original description: Putative Sb02g043160, Description = Putative uncharacterized protein Sb02g043160, PFAM = PF00271;PF00570;PF14493;PF00270;PF09382;PF16124)' T '29' 'protein' '' '' '29.1' 'protein.aa activation' 'nbv0.3scaffold9245_2425-12126' '(at1g18950 : 543.0) DDT domain superfamily; CONTAINS InterPro DOMAIN/s: DDT domain (InterPro:IPR004022); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25580.1); Has 20293 Blast hits to 13585 proteins in 823 species: Archae - 41; Bacteria - 1919; Metazoa - 8043; Fungi - 2539; Plants - 1031; Viruses - 220; Other Eukaryotes - 6500 (source: NCBI BLink). & (reliability: 1086.0) & (original description: Putative DDR4, Description = DDT domain-containing protein DDR4, PFAM = PF02791)' T '29.1' 'protein.aa activation' 'nbv0.3scaffold53694_4204-10186' '(at1g09150 : 279.0) pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478), Translation-associated RNA-binding, predicted (InterPro:IPR016437), Uncharacterised domain 2 (InterPro:IPR004521); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor SUI1 family protein (TAIR:AT1G71350.1); Has 885 Blast hits to 883 proteins in 291 species: Archae - 148; Bacteria - 0; Metazoa - 325; Fungi - 155; Plants - 86; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|37734 : 260.0) no description available & (gnl|cdd|32199 : 122.0) no description available & (reliability: 558.0) & (original description: Putative Mcts1, Description = Malignant T-cell-amplified sequence 1, PFAM = PF01472)' T '29.1' 'protein.aa activation' 'nbv0.3scaffold68477_1-8128' '(at3g04600 : 249.0) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotide binding, tryptophan-tRNA ligase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, tryptophanyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 2274 Blast hits to 2202 proteins in 759 species: Archae - 483; Bacteria - 800; Metazoa - 304; Fungi - 267; Plants - 65; Viruses - 5; Other Eukaryotes - 350 (source: NCBI BLink). & (gnl|cdd|37356 : 239.0) no description available & (gnl|cdd|84053 : 116.0) no description available & (reliability: 498.0) & (original description: Putative trpS, Description = Tryptophanyl-tRNA synthetase, PFAM = PF00579)' T '29.1' 'protein.aa activation' 'nbv0.5scaffold315_285712-295818' '(at4g27490 : 150.0) 3'-5'-exoribonuclease family protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: 3'-5'-exoribonuclease family protein (TAIR:AT3G61620.2); Has 6020 Blast hits to 6020 proteins in 1904 species: Archae - 333; Bacteria - 3622; Metazoa - 423; Fungi - 273; Plants - 197; Viruses - 0; Other Eukaryotes - 1172 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative SLG, Description = 3' exoribonuclease domain 1-containing family protein, PFAM = PF03725;PF01138)' T '29.1' 'protein.aa activation' 'nbv0.5scaffold1228_159003-221985' '(gnl|cdd|37356 : 451.0) no description available & (at3g04600 : 448.0) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotide binding, tryptophan-tRNA ligase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, tryptophanyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 2274 Blast hits to 2202 proteins in 759 species: Archae - 483; Bacteria - 800; Metazoa - 304; Fungi - 267; Plants - 65; Viruses - 5; Other Eukaryotes - 350 (source: NCBI BLink). & (gnl|cdd|84053 : 224.0) no description available & (reliability: 896.0) & (original description: Putative WARS, Description = Tryptophanyl-tRNA synthetase, PFAM = PF00579)' T '29.1' 'protein.aa activation' 'nbv0.5scaffold5454_28015-30844' '(at1g18950 : 126.0) DDT domain superfamily; CONTAINS InterPro DOMAIN/s: DDT domain (InterPro:IPR004022); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25580.1); Has 20293 Blast hits to 13585 proteins in 823 species: Archae - 41; Bacteria - 1919; Metazoa - 8043; Fungi - 2539; Plants - 1031; Viruses - 220; Other Eukaryotes - 6500 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative DDR4, Description = Aminoacyl-tRNA synthetase, PFAM = PF02791)' T '29.1' 'protein.aa activation' 'nbv0.5scaffold6812_11511-17532' '(at5g56090 : 587.0) Encodes a homolog of COX15. Microarray analysis show a 3.2 fold increase in transcription after treatment with rotenone, an electron transport chain inhibitor.; cytochrome c oxidase 15 (COX15); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein complex assembly; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome oxidase assembly (InterPro:IPR003780); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37936 : 482.0) no description available & (gnl|cdd|31800 : 185.0) no description available & (reliability: 1174.0) & (original description: Putative COX15, Description = Cytochrome c oxidase assembly protein COX15, PFAM = PF02628)' T '29.1' 'protein.aa activation' 'niben044scf00005589ctg002_13468-17306' '(gnl|cdd|38318 : 121.0) no description available & (at2g24490 : 119.0) Encodes a component of Replication Protein A. Component of transcriptional gene silencing which does not affect endogenous small RNA accumulation nor DNA methylation. Localized in the nucleus. Involved in DNA repair. Interacts physically with ROS1.; replicon protein A2 (RPA2); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Replication protein A, subunit RPA32 (InterPro:IPR014646), Replication protein A, C-terminal (InterPro:IPR014892), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365); BEST Arabidopsis thaliana protein match is: Replication protein A, subunit RPA32 (TAIR:AT3G02920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72950 : 84.9) no description available & (reliability: 216.0) & (original description: Putative rfa, Description = Putative Replication protein A 30 kDa subunit, PFAM = PF01336)' T '29.1' 'protein.aa activation' 'niben044scf00010162ctg000_7834-17555' '(at1g18950 : 261.0) DDT domain superfamily; CONTAINS InterPro DOMAIN/s: DDT domain (InterPro:IPR004022); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25580.1); Has 20293 Blast hits to 13585 proteins in 823 species: Archae - 41; Bacteria - 1919; Metazoa - 8043; Fungi - 2539; Plants - 1031; Viruses - 220; Other Eukaryotes - 6500 (source: NCBI BLink). & (reliability: 522.0) & (original description: Putative DDR4, Description = Aminoacyl-tRNA synthetase, PFAM = PF02791)' T '29.1' 'protein.aa activation' 'niben044scf00030289ctg001_10489-13664' '(at3g04600 : 251.0) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotide binding, tryptophan-tRNA ligase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, tryptophanyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 2274 Blast hits to 2202 proteins in 759 species: Archae - 483; Bacteria - 800; Metazoa - 304; Fungi - 267; Plants - 65; Viruses - 5; Other Eukaryotes - 350 (source: NCBI BLink). & (gnl|cdd|37356 : 236.0) no description available & (gnl|cdd|84053 : 118.0) no description available & (reliability: 502.0) & (original description: Putative trpS, Description = Tryptophan--tRNA ligase, cytoplasmic, PFAM = PF00579)' T '29.1' 'protein.aa activation' 'niben044scf00040852ctg007_1-4761' '(at3g04600 : 120.0) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotide binding, tryptophan-tRNA ligase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, tryptophanyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 2274 Blast hits to 2202 proteins in 759 species: Archae - 483; Bacteria - 800; Metazoa - 304; Fungi - 267; Plants - 65; Viruses - 5; Other Eukaryotes - 350 (source: NCBI BLink). & (gnl|cdd|37356 : 113.0) no description available & (reliability: 240.0) & (original description: Putative trpS, Description = Tryptophan--tRNA ligase, cytoplasmic, PFAM = PF00579)' T '29.1' 'protein.aa activation' 'niben044scf00043979ctg001_1-9934' '(at2g40660 : 336.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: tRNA binding; INVOLVED IN: tRNA aminoacylation for protein translation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), tRNA-binding domain (InterPro:IPR002547); BEST Arabidopsis thaliana protein match is: methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative (TAIR:AT4G13780.1); Has 6072 Blast hits to 6060 proteins in 2115 species: Archae - 244; Bacteria - 4267; Metazoa - 483; Fungi - 217; Plants - 163; Viruses - 1; Other Eukaryotes - 697 (source: NCBI BLink). & (gnl|cdd|37452 : 200.0) no description available & (q9zts1|sym_orysa : 153.0) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (gnl|cdd|48401 : 152.0) no description available & (reliability: 672.0) & (original description: Putative metG, Description = Aminoacyl tRNA synthase complex-interacting multifunctional protein 1, PFAM = PF01588)' T '29.1' 'protein.aa activation' 'niben101scf00024_227792-237455' '(at1g18950 : 547.0) DDT domain superfamily; CONTAINS InterPro DOMAIN/s: DDT domain (InterPro:IPR004022); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25580.1); Has 20293 Blast hits to 13585 proteins in 823 species: Archae - 41; Bacteria - 1919; Metazoa - 8043; Fungi - 2539; Plants - 1031; Viruses - 220; Other Eukaryotes - 6500 (source: NCBI BLink). & (reliability: 1094.0) & (original description: Putative DDR4, Description = DDT domain-containing protein DDR4, PFAM = PF02791;PF15612)' T '29.1' 'protein.aa activation' 'niben101scf00298_183699-191910' '(at3g04600 : 503.0) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotide binding, tryptophan-tRNA ligase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, tryptophanyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 2274 Blast hits to 2202 proteins in 759 species: Archae - 483; Bacteria - 800; Metazoa - 304; Fungi - 267; Plants - 65; Viruses - 5; Other Eukaryotes - 350 (source: NCBI BLink). & (gnl|cdd|37356 : 500.0) no description available & (gnl|cdd|84053 : 260.0) no description available & (reliability: 1006.0) & (original description: Putative WARS, Description = Tryptophanyl-tRNA synthetase, PFAM = PF00579)' T '29.1' 'protein.aa activation' 'niben101scf00369_1768254-1780543' '(at1g09150 : 291.0) pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478), Translation-associated RNA-binding, predicted (InterPro:IPR016437), Uncharacterised domain 2 (InterPro:IPR004521); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor SUI1 family protein (TAIR:AT1G71350.1); Has 885 Blast hits to 883 proteins in 291 species: Archae - 148; Bacteria - 0; Metazoa - 325; Fungi - 155; Plants - 86; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|37734 : 272.0) no description available & (gnl|cdd|32199 : 124.0) no description available & (reliability: 582.0) & (original description: Putative Mcts1, Description = Malignant T-cell-amplified sequence 1, PFAM = PF01472)' T '29.1' 'protein.aa activation' 'niben101scf00773_277972-286757' '(at2g40660 : 340.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: tRNA binding; INVOLVED IN: tRNA aminoacylation for protein translation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), tRNA-binding domain (InterPro:IPR002547); BEST Arabidopsis thaliana protein match is: methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative (TAIR:AT4G13780.1); Has 6072 Blast hits to 6060 proteins in 2115 species: Archae - 244; Bacteria - 4267; Metazoa - 483; Fungi - 217; Plants - 163; Viruses - 1; Other Eukaryotes - 697 (source: NCBI BLink). & (gnl|cdd|37452 : 197.0) no description available & (q9zts1|sym_orysa : 160.0) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (gnl|cdd|48401 : 153.0) no description available & (reliability: 680.0) & (original description: Putative metG, Description = Aminoacyl tRNA synthase complex-interacting multifunctional protein 1, PFAM = PF01588)' T '29.1' 'protein.aa activation' 'niben101scf00988_263299-275754' '(at4g27490 : 354.0) 3'-5'-exoribonuclease family protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: 3'-5'-exoribonuclease family protein (TAIR:AT3G61620.2); Has 6020 Blast hits to 6020 proteins in 1904 species: Archae - 333; Bacteria - 3622; Metazoa - 423; Fungi - 273; Plants - 197; Viruses - 0; Other Eukaryotes - 1172 (source: NCBI BLink). & (gnl|cdd|81244 : 163.0) no description available & (gnl|cdd|36286 : 155.0) no description available & (reliability: 708.0) & (original description: Putative RRP41L, Description = Exosome complex component RRP41-like, PFAM = PF01138;PF03725)' T '29.1' 'protein.aa activation' 'niben101scf01429_52520-65849' '(at3g02920 : 223.0) RPA32B; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication protein A, subunit RPA32 (InterPro:IPR014646), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication protein A, C-terminal (InterPro:IPR014892); BEST Arabidopsis thaliana protein match is: replicon protein A2 (TAIR:AT2G24490.2). & (gnl|cdd|38318 : 200.0) no description available & (gnl|cdd|34832 : 120.0) no description available & (reliability: 446.0) & (original description: Putative rfa, Description = Putative replication factor A, PFAM = PF08784)' T '29.1' 'protein.aa activation' 'niben101scf01438_435323-442888' '(at2g24490 : 218.0) Encodes a component of Replication Protein A. Component of transcriptional gene silencing which does not affect endogenous small RNA accumulation nor DNA methylation. Localized in the nucleus. Involved in DNA repair. Interacts physically with ROS1.; replicon protein A2 (RPA2); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Replication protein A, subunit RPA32 (InterPro:IPR014646), Replication protein A, C-terminal (InterPro:IPR014892), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365); BEST Arabidopsis thaliana protein match is: Replication protein A, subunit RPA32 (TAIR:AT3G02920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38318 : 185.0) no description available & (gnl|cdd|34832 : 130.0) no description available & (reliability: 408.0) & (original description: Putative RPA2A, Description = Replication protein A 32 kDa subunit A, PFAM = PF01336;PF08784)' T '29.1' 'protein.aa activation' 'niben101scf01779_98107-110983' '(at3g04600 : 671.0) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotide binding, tryptophan-tRNA ligase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, tryptophanyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 2274 Blast hits to 2202 proteins in 759 species: Archae - 483; Bacteria - 800; Metazoa - 304; Fungi - 267; Plants - 65; Viruses - 5; Other Eukaryotes - 350 (source: NCBI BLink). & (gnl|cdd|37356 : 643.0) no description available & (gnl|cdd|84053 : 327.0) no description available & (reliability: 1342.0) & (original description: Putative trpS, Description = Tryptophan--tRNA ligase, cytoplasmic, PFAM = PF00579)' T '29.1' 'protein.aa activation' 'niben101scf01779_98712-101430' '(at3g04600 : 150.0) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotide binding, tryptophan-tRNA ligase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, tryptophanyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 2274 Blast hits to 2202 proteins in 759 species: Archae - 483; Bacteria - 800; Metazoa - 304; Fungi - 267; Plants - 65; Viruses - 5; Other Eukaryotes - 350 (source: NCBI BLink). & (gnl|cdd|37356 : 136.0) no description available & (gnl|cdd|84053 : 80.3) no description available & (reliability: 300.0) & (original description: Putative trpS, Description = Tryptophan--tRNA ligase, cytoplasmic, PFAM = )' T '29.1' 'protein.aa activation' 'niben101scf02131_93813-96222' '(at3g62250 : 131.0) ubiquitin 5 (UBQ5); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: protein ubiquitination involved in ubiquitin-dependent protein catabolic process, translation; LOCATED IN: cytosolic small ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ribosomal protein S27a (InterPro:IPR002906), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 6 (TAIR:AT2G47110.2); Has 12703 Blast hits to 7391 proteins in 781 species: Archae - 108; Bacteria - 19; Metazoa - 5541; Fungi - 1408; Plants - 3106; Viruses - 188; Other Eukaryotes - 2333 (source: NCBI BLink). & (gnl|cdd|29205 : 122.0) no description available & (p69326|ubiq_wheat : 120.0) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|35228 : 120.0) no description available & (reliability: 252.0) & (original description: Putative ubb, Description = Polyubiquitin, PFAM = PF00240)' T '29.1' 'protein.aa activation' 'niben101scf02399_496288-505184' '(at5g56090 : 634.0) Encodes a homolog of COX15. Microarray analysis show a 3.2 fold increase in transcription after treatment with rotenone, an electron transport chain inhibitor.; cytochrome c oxidase 15 (COX15); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein complex assembly; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome oxidase assembly (InterPro:IPR003780); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37936 : 512.0) no description available & (gnl|cdd|31800 : 201.0) no description available & (reliability: 1268.0) & (original description: Putative COX15, Description = Cytochrome c oxidase assembly protein COX15, PFAM = PF02628)' T '29.1' 'protein.aa activation' 'niben101scf05688_313968-319322' '(at1g31340 : 183.0) Encodes a ubiquitin-related protein that is conjugated to target proteins by neddylation. It has been shown to be conjugated to the cullin AtCUL1. The RUB-conjugation pathway has been implicated in in auxin response.; related to ubiquitin 1 (RUB1); INVOLVED IN: protein modification process, response to auxin stimulus, protein neddylation, ethylene biosynthetic process, embryo development; LOCATED IN: plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 7 (TAIR:AT2G35635.1); Has 16064 Blast hits to 7349 proteins in 721 species: Archae - 0; Bacteria - 36; Metazoa - 7330; Fungi - 1879; Plants - 3570; Viruses - 331; Other Eukaryotes - 2918 (source: NCBI BLink). & (p69326|ubiq_wheat : 139.0) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|29205 : 138.0) no description available & (gnl|cdd|35227 : 134.0) no description available & (reliability: 334.0) & (original description: Putative ubb, Description = Polyubiquitin, PFAM = PF00240;PF00240)' T '29.1' 'protein.aa activation' 'niben101scf06290_189444-202454' '(at2g25840 : 517.0) ovule abortion 4 (OVA4); FUNCTIONS IN: aminoacyl-tRNA ligase activity, tryptophan-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80780 : 508.0) no description available & (gnl|cdd|37924 : 445.0) no description available & (reliability: 1034.0) & (original description: Putative OVA4, Description = Tryptophan--tRNA ligase, chloroplastic/mitochondrial, PFAM = PF00579)' T '29.1' 'protein.aa activation' 'niben101scf06698_217787-232459' '(at2g25840 : 512.0) ovule abortion 4 (OVA4); FUNCTIONS IN: aminoacyl-tRNA ligase activity, tryptophan-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80780 : 509.0) no description available & (gnl|cdd|37924 : 439.0) no description available & (reliability: 1024.0) & (original description: Putative trpS, Description = Tryptophan--tRNA ligase, PFAM = PF00579)' T '29.1' 'protein.aa activation' 'niben101scf07147_270338-280413' '(at1g18950 : 261.0) DDT domain superfamily; CONTAINS InterPro DOMAIN/s: DDT domain (InterPro:IPR004022); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25580.1); Has 20293 Blast hits to 13585 proteins in 823 species: Archae - 41; Bacteria - 1919; Metazoa - 8043; Fungi - 2539; Plants - 1031; Viruses - 220; Other Eukaryotes - 6500 (source: NCBI BLink). & (reliability: 522.0) & (original description: Putative DDR4, Description = Aminoacyl-tRNA synthetase, PFAM = PF02791)' T '29.1.1' 'protein.aa activation.tyrosine-tRNA ligase' 'nbv0.5scaffold1793_402716-407639' '(at2g33840 : 157.0) Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; FUNCTIONS IN: tyrosine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: translation, tRNA aminoacylation for protein translation, tyrosyl-tRNA aminoacylation; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tyrosine tRNA ligase, archaeal/eukaryotic (InterPro:IPR016485), Tyrosyl-tRNA synthetase, class Ib, archaeal/eukaryotic cytosolic (InterPro:IPR015624), Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial (InterPro:IPR002307), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT1G28350.1); Has 5443 Blast hits to 5419 proteins in 1791 species: Archae - 389; Bacteria - 3121; Metazoa - 323; Fungi - 286; Plants - 124; Viruses - 5; Other Eukaryotes - 1195 (source: NCBI BLink). & (gnl|cdd|37355 : 113.0) no description available & (gnl|cdd|82676 : 86.4) no description available & (reliability: 314.0) & (original description: Putative tyrS, Description = Tyrosyl-tRNA synthetase, PFAM = PF00579)' T '29.1.1' 'protein.aa activation.tyrosine-tRNA ligase' 'niben101scf02379_256163-261875' '(at2g33840 : 155.0) Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; FUNCTIONS IN: tyrosine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: translation, tRNA aminoacylation for protein translation, tyrosyl-tRNA aminoacylation; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tyrosine tRNA ligase, archaeal/eukaryotic (InterPro:IPR016485), Tyrosyl-tRNA synthetase, class Ib, archaeal/eukaryotic cytosolic (InterPro:IPR015624), Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial (InterPro:IPR002307), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT1G28350.1); Has 5443 Blast hits to 5419 proteins in 1791 species: Archae - 389; Bacteria - 3121; Metazoa - 323; Fungi - 286; Plants - 124; Viruses - 5; Other Eukaryotes - 1195 (source: NCBI BLink). & (gnl|cdd|37355 : 112.0) no description available & (gnl|cdd|82676 : 84.1) no description available & (reliability: 310.0) & (original description: Putative tyrS, Description = Tyrosine-tRNA ligase, PFAM = PF00579)' T '29.1.1' 'protein.aa activation.tyrosine-tRNA ligase' 'niben101scf04955_792527-796318' '(at1g28350 : 90.9) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: tyrosine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: translation, tyrosyl-tRNA aminoacylation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tyrosyl-tRNA synthetase, class Ib, archaeal/eukaryotic cytosolic (InterPro:IPR015624), Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial (InterPro:IPR002307), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); BEST Arabidopsis thaliana protein match is: Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial (TAIR:AT2G33840.1); Has 6761 Blast hits to 4745 proteins in 1539 species: Archae - 718; Bacteria - 3084; Metazoa - 577; Fungi - 521; Plants - 241; Viruses - 10; Other Eukaryotes - 1610 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative TYRS, Description = Tyrosyl-tRNA synthetase, PFAM = )' T '29.1.1' 'protein.aa activation.tyrosine-tRNA ligase' 'niben101scf10575_151058-159123' '(at2g33840 : 583.0) Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; FUNCTIONS IN: tyrosine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: translation, tRNA aminoacylation for protein translation, tyrosyl-tRNA aminoacylation; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tyrosine tRNA ligase, archaeal/eukaryotic (InterPro:IPR016485), Tyrosyl-tRNA synthetase, class Ib, archaeal/eukaryotic cytosolic (InterPro:IPR015624), Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial (InterPro:IPR002307), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT1G28350.1); Has 5443 Blast hits to 5419 proteins in 1791 species: Archae - 389; Bacteria - 3121; Metazoa - 323; Fungi - 286; Plants - 124; Viruses - 5; Other Eukaryotes - 1195 (source: NCBI BLink). & (gnl|cdd|37355 : 432.0) no description available & (gnl|cdd|82676 : 319.0) no description available & (reliability: 1166.0) & (original description: Putative tyrS, Description = Tyrosyl-tRNA synthetase, PFAM = PF00579)' T '29.1.1' 'protein.aa activation.tyrosine-tRNA ligase' 'niben101scf11408_138930-142492' '(at3g02660 : 631.0) EMBRYO DEFECTIVE 2768 (emb2768); FUNCTIONS IN: RNA binding, tyrosine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial (InterPro:IPR002307), RNA-binding S4 (InterPro:IPR002942), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 9022 Blast hits to 9013 proteins in 2715 species: Archae - 16; Bacteria - 5542; Metazoa - 116; Fungi - 145; Plants - 38; Viruses - 0; Other Eukaryotes - 3165 (source: NCBI BLink). & (gnl|cdd|37834 : 503.0) no description available & (gnl|cdd|81792 : 414.0) no description available & (reliability: 1262.0) & (original description: Putative tyrS, Description = Tyrosine--tRNA ligase, PFAM = PF01479;PF00579)' T '29.1.3' 'protein.aa activation.threonine-tRNA ligase' 'nbv0.3scaffold8489_49710-53208' '(at5g26830 : 286.0) Encodes a dual-targeted threonyl-tRNA synthetase found in both the chloroplast and mitochondrion.; Threonyl-tRNA synthetase; FUNCTIONS IN: ligase activity, forming aminoacyl-tRNA and related compounds, threonine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: threonyl-tRNA aminoacylation, tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, cell wall, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Threonyl-tRNA synthetase, class IIa (InterPro:IPR002320), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), TGS-like (InterPro:IPR012676), TGS (InterPro:IPR004095), Anticodon-binding (InterPro:IPR004154), Threonyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR018158); BEST Arabidopsis thaliana protein match is: threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative (TAIR:AT2G04842.1); Has 19313 Blast hits to 19116 proteins in 2937 species: Archae - 413; Bacteria - 11477; Metazoa - 486; Fungi - 321; Plants - 109; Viruses - 0; Other Eukaryotes - 6507 (source: NCBI BLink). & (gnl|cdd|36850 : 261.0) no description available & (gnl|cdd|80656 : 226.0) no description available & (reliability: 572.0) & (original description: Putative tars, Description = Threonyl-tRNA synthetase, PFAM = PF03129;PF00587)' T '29.1.3' 'protein.aa activation.threonine-tRNA ligase' 'niben044scf00032031ctg006_1-2130' '(gnl|cdd|36850 : 299.0) no description available & (at5g26830 : 298.0) Encodes a dual-targeted threonyl-tRNA synthetase found in both the chloroplast and mitochondrion.; Threonyl-tRNA synthetase; FUNCTIONS IN: ligase activity, forming aminoacyl-tRNA and related compounds, threonine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: threonyl-tRNA aminoacylation, tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, cell wall, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Threonyl-tRNA synthetase, class IIa (InterPro:IPR002320), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), TGS-like (InterPro:IPR012676), TGS (InterPro:IPR004095), Anticodon-binding (InterPro:IPR004154), Threonyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR018158); BEST Arabidopsis thaliana protein match is: threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative (TAIR:AT2G04842.1); Has 19313 Blast hits to 19116 proteins in 2937 species: Archae - 413; Bacteria - 11477; Metazoa - 486; Fungi - 321; Plants - 109; Viruses - 0; Other Eukaryotes - 6507 (source: NCBI BLink). & (gnl|cdd|80656 : 249.0) no description available & (reliability: 596.0) & (original description: Putative v1g151543, Description = Predicted protein, PFAM = PF03129;PF00587)' T '29.1.3' 'protein.aa activation.threonine-tRNA ligase' 'niben101scf01037_943410-958877' '(at2g04842 : 1081.0) Encodes a dual localized threonyl-tRNA synthetase found both in the mitochondrion and the chloroplast. Plants mutated in this gene terminate as embryos in the globular stage.; EMBRYO DEFECTIVE 2761 (EMB2761); FUNCTIONS IN: ligase activity, forming aminoacyl-tRNA and related compounds, nucleotide binding, aminoacyl-tRNA ligase activity, threonine-tRNA ligase activity, ATP binding; INVOLVED IN: threonyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Threonyl-tRNA synthetase, class IIa (InterPro:IPR002320), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), Anticodon-binding (InterPro:IPR004154), Threonyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR018158); BEST Arabidopsis thaliana protein match is: Threonyl-tRNA synthetase (TAIR:AT5G26830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80656 : 877.0) no description available & (gnl|cdd|36850 : 418.0) no description available & (reliability: 2162.0) & (original description: Putative thrS, Description = Threonine--tRNA ligase, PFAM = PF00587;PF03129;PF07973)' T '29.1.3' 'protein.aa activation.threonine-tRNA ligase' 'niben101scf01037_945146-949085' '(at2g04842 : 416.0) Encodes a dual localized threonyl-tRNA synthetase found both in the mitochondrion and the chloroplast. Plants mutated in this gene terminate as embryos in the globular stage.; EMBRYO DEFECTIVE 2761 (EMB2761); FUNCTIONS IN: ligase activity, forming aminoacyl-tRNA and related compounds, nucleotide binding, aminoacyl-tRNA ligase activity, threonine-tRNA ligase activity, ATP binding; INVOLVED IN: threonyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Threonyl-tRNA synthetase, class IIa (InterPro:IPR002320), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), Anticodon-binding (InterPro:IPR004154), Threonyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR018158); BEST Arabidopsis thaliana protein match is: Threonyl-tRNA synthetase (TAIR:AT5G26830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80656 : 357.0) no description available & (gnl|cdd|36850 : 158.0) no description available & (reliability: 832.0) & (original description: Putative thrS, Description = Threonine--tRNA ligase, PFAM = PF00587;PF07973)' T '29.1.3' 'protein.aa activation.threonine-tRNA ligase' 'niben101scf03099_79213-99277' '(at5g26830 : 1061.0) Encodes a dual-targeted threonyl-tRNA synthetase found in both the chloroplast and mitochondrion.; Threonyl-tRNA synthetase; FUNCTIONS IN: ligase activity, forming aminoacyl-tRNA and related compounds, threonine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: threonyl-tRNA aminoacylation, tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, cell wall, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Threonyl-tRNA synthetase, class IIa (InterPro:IPR002320), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), TGS-like (InterPro:IPR012676), TGS (InterPro:IPR004095), Anticodon-binding (InterPro:IPR004154), Threonyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR018158); BEST Arabidopsis thaliana protein match is: threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative (TAIR:AT2G04842.1); Has 19313 Blast hits to 19116 proteins in 2937 species: Archae - 413; Bacteria - 11477; Metazoa - 486; Fungi - 321; Plants - 109; Viruses - 0; Other Eukaryotes - 6507 (source: NCBI BLink). & (gnl|cdd|80656 : 766.0) no description available & (gnl|cdd|36850 : 684.0) no description available & (reliability: 2122.0) & (original description: Putative THRRS, Description = Threonine--tRNA ligase, mitochondrial 1, PFAM = PF00587;PF07973;PF03129;PF02824)' T '29.1.3' 'protein.aa activation.threonine-tRNA ligase' 'niben101scf03563_167804-177579' '(at2g04842 : 1076.0) Encodes a dual localized threonyl-tRNA synthetase found both in the mitochondrion and the chloroplast. Plants mutated in this gene terminate as embryos in the globular stage.; EMBRYO DEFECTIVE 2761 (EMB2761); FUNCTIONS IN: ligase activity, forming aminoacyl-tRNA and related compounds, nucleotide binding, aminoacyl-tRNA ligase activity, threonine-tRNA ligase activity, ATP binding; INVOLVED IN: threonyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Threonyl-tRNA synthetase, class IIa (InterPro:IPR002320), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), Anticodon-binding (InterPro:IPR004154), Threonyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR018158); BEST Arabidopsis thaliana protein match is: Threonyl-tRNA synthetase (TAIR:AT5G26830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80656 : 870.0) no description available & (gnl|cdd|36850 : 423.0) no description available & (reliability: 2152.0) & (original description: Putative thrS, Description = Threonine--tRNA ligase, PFAM = PF00587;PF03129;PF07973)' T '29.1.3' 'protein.aa activation.threonine-tRNA ligase' 'niben101scf06734_224513-236143' '(at5g26830 : 780.0) Encodes a dual-targeted threonyl-tRNA synthetase found in both the chloroplast and mitochondrion.; Threonyl-tRNA synthetase; FUNCTIONS IN: ligase activity, forming aminoacyl-tRNA and related compounds, threonine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: threonyl-tRNA aminoacylation, tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, cell wall, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Threonyl-tRNA synthetase, class IIa (InterPro:IPR002320), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), TGS-like (InterPro:IPR012676), TGS (InterPro:IPR004095), Anticodon-binding (InterPro:IPR004154), Threonyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR018158); BEST Arabidopsis thaliana protein match is: threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative (TAIR:AT2G04842.1); Has 19313 Blast hits to 19116 proteins in 2937 species: Archae - 413; Bacteria - 11477; Metazoa - 486; Fungi - 321; Plants - 109; Viruses - 0; Other Eukaryotes - 6507 (source: NCBI BLink). & (gnl|cdd|80656 : 550.0) no description available & (gnl|cdd|36850 : 425.0) no description available & (reliability: 1560.0) & (original description: Putative tars, Description = Threonyl-tRNA synthetase, PFAM = PF07973;PF02824;PF00587)' T '29.1.4' 'protein.aa activation.leucine-tRNA ligase' 'niben044scf00019380ctg014_26448-37077' '(at4g04350 : 1425.0) EMBRYO DEFECTIVE 2369 (EMB2369); FUNCTIONS IN: aminoacyl-tRNA ligase activity, nucleotide binding, leucine-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial (InterPro:IPR002302), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT5G49030.1); Has 40727 Blast hits to 36917 proteins in 3154 species: Archae - 1372; Bacteria - 23600; Metazoa - 846; Fungi - 790; Plants - 334; Viruses - 3; Other Eukaryotes - 13782 (source: NCBI BLink). & (gnl|cdd|80643 : 1265.0) no description available & (gnl|cdd|35656 : 971.0) no description available & (reliability: 2850.0) & (original description: Putative leuS, Description = Leucine--tRNA ligase, PFAM = PF08264;PF09334;PF13603;PF00133;PF00133)' T '29.1.4' 'protein.aa activation.leucine-tRNA ligase' 'niben101scf00758_675831-682526' '(at1g09620 : 1534.0) ATP binding;leucine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases; FUNCTIONS IN: nucleotide binding, aminoacyl-tRNA ligase activity, leucine-tRNA ligase activity, ATP binding; INVOLVED IN: leucyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic (InterPro:IPR004493); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT4G04350.1); Has 16931 Blast hits to 15894 proteins in 2953 species: Archae - 757; Bacteria - 11010; Metazoa - 639; Fungi - 488; Plants - 264; Viruses - 0; Other Eukaryotes - 3773 (source: NCBI BLink). & (gnl|cdd|35658 : 1443.0) no description available & (gnl|cdd|84063 : 651.0) no description available & (reliability: 3068.0) & (original description: Putative SYLC, Description = Leucine--tRNA ligase, cytoplasmic, PFAM = PF08264;PF00133;PF00133)' T '29.1.4' 'protein.aa activation.leucine-tRNA ligase' 'niben101scf02145_702150-713772' '(at4g04350 : 1424.0) EMBRYO DEFECTIVE 2369 (EMB2369); FUNCTIONS IN: aminoacyl-tRNA ligase activity, nucleotide binding, leucine-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial (InterPro:IPR002302), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT5G49030.1); Has 40727 Blast hits to 36917 proteins in 3154 species: Archae - 1372; Bacteria - 23600; Metazoa - 846; Fungi - 790; Plants - 334; Viruses - 3; Other Eukaryotes - 13782 (source: NCBI BLink). & (gnl|cdd|80643 : 1272.0) no description available & (gnl|cdd|35656 : 978.0) no description available & (reliability: 2848.0) & (original description: Putative leuS, Description = Leucine--tRNA ligase, PFAM = PF08264;PF00133;PF13603;PF09334)' T '29.1.4' 'protein.aa activation.leucine-tRNA ligase' 'niben101scf05005_533412-539130' '(at1g09620 : 1110.0) ATP binding;leucine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases; FUNCTIONS IN: nucleotide binding, aminoacyl-tRNA ligase activity, leucine-tRNA ligase activity, ATP binding; INVOLVED IN: leucyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic (InterPro:IPR004493); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT4G04350.1); Has 16931 Blast hits to 15894 proteins in 2953 species: Archae - 757; Bacteria - 11010; Metazoa - 639; Fungi - 488; Plants - 264; Viruses - 0; Other Eukaryotes - 3773 (source: NCBI BLink). & (gnl|cdd|35658 : 1024.0) no description available & (gnl|cdd|84063 : 517.0) no description available & (reliability: 2220.0) & (original description: Putative lars, Description = Leucine--tRNA ligase, cytoplasmic, PFAM = PF00133;PF08264)' T '29.1.4' 'protein.aa activation.leucine-tRNA ligase' 'niben101scf13857_98875-104114' '(at1g09620 : 1527.0) ATP binding;leucine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases; FUNCTIONS IN: nucleotide binding, aminoacyl-tRNA ligase activity, leucine-tRNA ligase activity, ATP binding; INVOLVED IN: leucyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic (InterPro:IPR004493); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT4G04350.1); Has 16931 Blast hits to 15894 proteins in 2953 species: Archae - 757; Bacteria - 11010; Metazoa - 639; Fungi - 488; Plants - 264; Viruses - 0; Other Eukaryotes - 3773 (source: NCBI BLink). & (gnl|cdd|35658 : 1451.0) no description available & (gnl|cdd|84063 : 671.0) no description available & (reliability: 3054.0) & (original description: Putative lars, Description = Leucine--tRNA ligase, cytoplasmic, PFAM = PF08264;PF00133;PF00133)' T '29.1.5' 'protein.aa activation.isoleucine-tRNA ligase' 'nbv0.3scaffold9634_34156-36725' '(at1g65870 : 194.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: cell wall; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G22900.1); Has 912 Blast hits to 910 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 912; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 155.0) no description available & (reliability: 358.0) & (original description: Putative DIR21, Description = Dirigent protein 21, PFAM = PF03018)' T '29.1.5' 'protein.aa activation.isoleucine-tRNA ligase' 'nbv0.5scaffold211_635799-675212' '(at5g49030 : 1463.0) ovule abortion 2 (OVA2); FUNCTIONS IN: in 6 functions; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Plant disease resistance response protein (InterPro:IPR004265), Isoleucyl-tRNA synthetase (InterPro:IPR018353), Isoleucyl-tRNA synthetase, class Ia (InterPro:IPR002301), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Isoleucyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR015905), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA glycosylase/AP lyase/isoleucyl tRNA synthetase, zinc finger domain (InterPro:IPR010663), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT5G49040.1). & (gnl|cdd|81722 : 1114.0) no description available & (gnl|cdd|35654 : 1078.0) no description available & (reliability: 2926.0) & (original description: Putative ileS, Description = Isoleucine--tRNA ligase, PFAM = PF00133;PF06827;PF08264)' T '29.1.5' 'protein.aa activation.isoleucine-tRNA ligase' 'nbv0.5scaffold665_374347-430871' '(at1g58170 : 157.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT5G49040.1); Has 838 Blast hits to 837 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 838; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 138.0) no description available & (reliability: 286.0) & (original description: Putative DIR19, Description = Dirigent protein 19, PFAM = PF03018)' T '29.1.5' 'protein.aa activation.isoleucine-tRNA ligase' 'niben044scf00010763ctg010_14428-17748' '(at1g65870 : 157.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: cell wall; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G22900.1); Has 912 Blast hits to 910 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 912; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 142.0) no description available & (reliability: 286.0) & (original description: Putative DIR19, Description = Dirigent protein 19, PFAM = PF03018)' T '29.1.5' 'protein.aa activation.isoleucine-tRNA ligase' 'niben101scf00426_148397-183619' '(at4g10320 : 1894.0) tRNA synthetase class I (I, L, M and V) family protein; FUNCTIONS IN: isoleucine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, tRNA aminoacylation for protein translation; LOCATED IN: cytosol; EXPRESSED IN: male gametophyte, guard cell, epidermis, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Isoleucyl-tRNA synthetase (InterPro:IPR018353), Isoleucyl-tRNA synthetase, class Ia (InterPro:IPR002301), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Isoleucyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR015905), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT5G49030.3); Has 38868 Blast hits to 32849 proteins in 3074 species: Archae - 1055; Bacteria - 22228; Metazoa - 780; Fungi - 735; Plants - 304; Viruses - 0; Other Eukaryotes - 13766 (source: NCBI BLink). & (gnl|cdd|35655 : 1571.0) no description available & (gnl|cdd|81821 : 1223.0) no description available & (reliability: 3788.0) & (original description: Putative iars, Description = Isoleucine--tRNA ligase, cytoplasmic, PFAM = PF08264;PF00133;PF00133)' T '29.1.5' 'protein.aa activation.isoleucine-tRNA ligase' 'niben101scf02995_56152-81736' '(at4g10320 : 1876.0) tRNA synthetase class I (I, L, M and V) family protein; FUNCTIONS IN: isoleucine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, tRNA aminoacylation for protein translation; LOCATED IN: cytosol; EXPRESSED IN: male gametophyte, guard cell, epidermis, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Isoleucyl-tRNA synthetase (InterPro:IPR018353), Isoleucyl-tRNA synthetase, class Ia (InterPro:IPR002301), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Isoleucyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR015905), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT5G49030.3); Has 38868 Blast hits to 32849 proteins in 3074 species: Archae - 1055; Bacteria - 22228; Metazoa - 780; Fungi - 735; Plants - 304; Viruses - 0; Other Eukaryotes - 13766 (source: NCBI BLink). & (gnl|cdd|35655 : 1568.0) no description available & (gnl|cdd|81821 : 1221.0) no description available & (reliability: 3752.0) & (original description: Putative iars, Description = Isoleucine--tRNA ligase, cytoplasmic, PFAM = PF00133;PF00133;PF08264)' T '29.1.5' 'protein.aa activation.isoleucine-tRNA ligase' 'niben101scf05872_227625-230194' '(at1g65870 : 196.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: cell wall; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G22900.1); Has 912 Blast hits to 910 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 912; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66675 : 155.0) no description available & (reliability: 358.0) & (original description: Putative DIR21, Description = Dirigent protein 21, PFAM = PF03018)' T '29.1.5' 'protein.aa activation.isoleucine-tRNA ligase' 'niben101scf07677_55653-91740' '(at5g49030 : 1659.0) ovule abortion 2 (OVA2); FUNCTIONS IN: in 6 functions; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Plant disease resistance response protein (InterPro:IPR004265), Isoleucyl-tRNA synthetase (InterPro:IPR018353), Isoleucyl-tRNA synthetase, class Ia (InterPro:IPR002301), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Isoleucyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR015905), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA glycosylase/AP lyase/isoleucyl tRNA synthetase, zinc finger domain (InterPro:IPR010663), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT5G49040.1). & (gnl|cdd|81722 : 1231.0) no description available & (gnl|cdd|35654 : 1160.0) no description available & (reliability: 3318.0) & (original description: Putative OVA2, Description = Isoleucine--tRNA ligase, chloroplastic/mitochondrial, PFAM = PF08264;PF00133;PF06827)' T '29.1.6' 'protein.aa activation.lysine-tRNA ligase' 'nbv0.3scaffold115256_1-2511' '(at3g13490 : 300.0) Encodes a dual targeted lysyl-tRNA ligase that is found both in the mitochondrion and the chloroplast. Plants mutated in this gene exhibit an ovule abortion phenotype.; OVULE ABORTION 5 (OVA5); FUNCTIONS IN: aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding, nucleic acid binding, lysine-tRNA ligase activity; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Lysyl-tRNA synthetase, class II, C-terminal (InterPro:IPR018149), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150), Lysyl-tRNA synthetase, class II (InterPro:IPR002313); BEST Arabidopsis thaliana protein match is: lysyl-tRNA synthetase 1 (TAIR:AT3G11710.1); Has 27489 Blast hits to 22097 proteins in 2943 species: Archae - 404; Bacteria - 18954; Metazoa - 615; Fungi - 809; Plants - 266; Viruses - 0; Other Eukaryotes - 6441 (source: NCBI BLink). & (gnl|cdd|80686 : 236.0) no description available & (gnl|cdd|37096 : 212.0) no description available & (q6f2u9|syk_orysa : 111.0) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Oryza sativa (Rice) & (reliability: 600.0) & (original description: Putative cmk11, Description = Lysyl-tRNA synthetase, PFAM = PF00152)' T '29.1.6' 'protein.aa activation.lysine-tRNA ligase' 'niben101scf00182_402002-416023' '(q6f2u9|syk_orysa : 672.0) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Oryza sativa (Rice) & (at3g11710 : 651.0) lysyl-tRNA synthetase 1 (ATKRS-1); FUNCTIONS IN: ATP binding, lysine-tRNA ligase activity; INVOLVED IN: lysyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Lysyl-tRNA synthetase, class II, C-terminal (InterPro:IPR018149), Lysyl-tRNA synthetase, class II (InterPro:IPR002313), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Lysyl-tRNA synthetase, class II (TAIR:AT3G13490.1); Has 24040 Blast hits to 20328 proteins in 2969 species: Archae - 380; Bacteria - 16623; Metazoa - 629; Fungi - 774; Plants - 209; Viruses - 0; Other Eukaryotes - 5425 (source: NCBI BLink). & (gnl|cdd|37096 : 618.0) no description available & (gnl|cdd|29820 : 519.0) no description available & (reliability: 1302.0) & (original description: Putative kars, Description = Lysine--tRNA ligase, PFAM = PF00152)' T '29.1.6' 'protein.aa activation.lysine-tRNA ligase' 'niben101scf01673_73099-82884' '(q6f2u9|syk_orysa : 883.0) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Oryza sativa (Rice) & (at3g11710 : 868.0) lysyl-tRNA synthetase 1 (ATKRS-1); FUNCTIONS IN: ATP binding, lysine-tRNA ligase activity; INVOLVED IN: lysyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Lysyl-tRNA synthetase, class II, C-terminal (InterPro:IPR018149), Lysyl-tRNA synthetase, class II (InterPro:IPR002313), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Lysyl-tRNA synthetase, class II (TAIR:AT3G13490.1); Has 24040 Blast hits to 20328 proteins in 2969 species: Archae - 380; Bacteria - 16623; Metazoa - 629; Fungi - 774; Plants - 209; Viruses - 0; Other Eukaryotes - 5425 (source: NCBI BLink). & (gnl|cdd|37096 : 790.0) no description available & (gnl|cdd|31383 : 603.0) no description available & (reliability: 1736.0) & (original description: Putative kars, Description = Lysine--tRNA ligase, PFAM = PF00152;PF01336)' T '29.1.6' 'protein.aa activation.lysine-tRNA ligase' 'niben101scf03323_154854-189735' '(at3g13490 : 855.0) Encodes a dual targeted lysyl-tRNA ligase that is found both in the mitochondrion and the chloroplast. Plants mutated in this gene exhibit an ovule abortion phenotype.; OVULE ABORTION 5 (OVA5); FUNCTIONS IN: aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding, nucleic acid binding, lysine-tRNA ligase activity; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Lysyl-tRNA synthetase, class II, C-terminal (InterPro:IPR018149), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150), Lysyl-tRNA synthetase, class II (InterPro:IPR002313); BEST Arabidopsis thaliana protein match is: lysyl-tRNA synthetase 1 (TAIR:AT3G11710.1); Has 27489 Blast hits to 22097 proteins in 2943 species: Archae - 404; Bacteria - 18954; Metazoa - 615; Fungi - 809; Plants - 266; Viruses - 0; Other Eukaryotes - 6441 (source: NCBI BLink). & (gnl|cdd|80686 : 683.0) no description available & (gnl|cdd|37096 : 620.0) no description available & (q6f2u9|syk_orysa : 327.0) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Oryza sativa (Rice) & (reliability: 1710.0) & (original description: Putative lysS, Description = Lysine--tRNA ligase, PFAM = PF00152;PF01336)' T '29.1.6' 'protein.aa activation.lysine-tRNA ligase' 'niben101scf05216_849805-882190' '(at3g13490 : 853.0) Encodes a dual targeted lysyl-tRNA ligase that is found both in the mitochondrion and the chloroplast. Plants mutated in this gene exhibit an ovule abortion phenotype.; OVULE ABORTION 5 (OVA5); FUNCTIONS IN: aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding, nucleic acid binding, lysine-tRNA ligase activity; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Lysyl-tRNA synthetase, class II, C-terminal (InterPro:IPR018149), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150), Lysyl-tRNA synthetase, class II (InterPro:IPR002313); BEST Arabidopsis thaliana protein match is: lysyl-tRNA synthetase 1 (TAIR:AT3G11710.1); Has 27489 Blast hits to 22097 proteins in 2943 species: Archae - 404; Bacteria - 18954; Metazoa - 615; Fungi - 809; Plants - 266; Viruses - 0; Other Eukaryotes - 6441 (source: NCBI BLink). & (gnl|cdd|80686 : 680.0) no description available & (gnl|cdd|37096 : 621.0) no description available & (q6f2u9|syk_orysa : 327.0) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Oryza sativa (Rice) & (reliability: 1706.0) & (original description: Putative OVA5, Description = Lysine--tRNA ligase, chloroplastic/mitochondrial, PFAM = PF00152;PF01336)' T '29.1.7' 'protein.aa activation.alanine-tRNA ligase' 'niben101scf03913_201355-213793' '(at5g22800 : 1246.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 1030 (EMB1030); FUNCTIONS IN: alanine-tRNA ligase activity, ligase activity, forming aminoacyl-tRNA and related compounds, nucleotide binding, ATP binding, nucleic acid binding; INVOLVED IN: alanyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Alanyl-tRNA synthetase, class IIc (InterPro:IPR002318), Alanyl-tRNA synthetase, class IIc, anti-codon-binding domain (InterPro:IPR018162), Alanyl-tRNA synthetase, class IIc, core domain (InterPro:IPR018165), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), Alanyl-tRNA synthetase, class IIc, N-terminal (InterPro:IPR018164), Phosphoesterase, DHHA1 (InterPro:IPR003156); BEST Arabidopsis thaliana protein match is: Alanyl-tRNA synthetase (TAIR:AT1G50200.1); Has 15847 Blast hits to 15731 proteins in 3137 species: Archae - 486; Bacteria - 7745; Metazoa - 750; Fungi - 242; Plants - 138; Viruses - 0; Other Eukaryotes - 6486 (source: NCBI BLink). & (gnl|cdd|80592 : 1071.0) no description available & (gnl|cdd|35409 : 607.0) no description available & (reliability: 2492.0) & (original description: Putative alaS, Description = Alanine--tRNA ligase, PFAM = PF07973;PF01411;PF02272)' T '29.1.7' 'protein.aa activation.alanine-tRNA ligase' 'niben101scf08047_123461-136672' '(at5g22800 : 1239.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 1030 (EMB1030); FUNCTIONS IN: alanine-tRNA ligase activity, ligase activity, forming aminoacyl-tRNA and related compounds, nucleotide binding, ATP binding, nucleic acid binding; INVOLVED IN: alanyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Alanyl-tRNA synthetase, class IIc (InterPro:IPR002318), Alanyl-tRNA synthetase, class IIc, anti-codon-binding domain (InterPro:IPR018162), Alanyl-tRNA synthetase, class IIc, core domain (InterPro:IPR018165), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), Alanyl-tRNA synthetase, class IIc, N-terminal (InterPro:IPR018164), Phosphoesterase, DHHA1 (InterPro:IPR003156); BEST Arabidopsis thaliana protein match is: Alanyl-tRNA synthetase (TAIR:AT1G50200.1); Has 15847 Blast hits to 15731 proteins in 3137 species: Archae - 486; Bacteria - 7745; Metazoa - 750; Fungi - 242; Plants - 138; Viruses - 0; Other Eukaryotes - 6486 (source: NCBI BLink). & (gnl|cdd|80592 : 1078.0) no description available & (gnl|cdd|35409 : 610.0) no description available & (reliability: 2478.0) & (original description: Putative alaS, Description = Alanine--tRNA ligase, PFAM = PF07973;PF01411;PF02272)' T '29.1.7' 'protein.aa activation.alanine-tRNA ligase' 'niben101scf12983_265556-281937' '(at1g50200 : 1422.0) Alanyl-tRNA synthetase (ALATS); FUNCTIONS IN: alanine-tRNA ligase activity, ligase activity, forming aminoacyl-tRNA and related compounds, nucleotide binding, ATP binding, nucleic acid binding; INVOLVED IN: alanyl-tRNA aminoacylation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alanyl-tRNA synthetase, class IIc (InterPro:IPR002318), Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Alanyl-tRNA synthetase, class IIc, anti-codon-binding domain (InterPro:IPR018162), Alanyl-tRNA synthetase, class IIc, core domain (InterPro:IPR018165), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), Alanyl-tRNA synthetase, class IIc, N-terminal (InterPro:IPR018164), Phosphoesterase, DHHA1 (InterPro:IPR003156); BEST Arabidopsis thaliana protein match is: Alanyl-tRNA synthetase, class IIc (TAIR:AT5G22800.1). & (gnl|cdd|35409 : 1035.0) no description available & (gnl|cdd|80592 : 892.0) no description available & (reliability: 2844.0) & (original description: Putative ALATS, Description = Alanine--tRNA ligase, PFAM = PF01411;PF02272;PF07973)' T '29.1.7' 'protein.aa activation.alanine-tRNA ligase' 'niben101scf21813_57441-73523' '(at1g50200 : 1419.0) Alanyl-tRNA synthetase (ALATS); FUNCTIONS IN: alanine-tRNA ligase activity, ligase activity, forming aminoacyl-tRNA and related compounds, nucleotide binding, ATP binding, nucleic acid binding; INVOLVED IN: alanyl-tRNA aminoacylation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alanyl-tRNA synthetase, class IIc (InterPro:IPR002318), Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Alanyl-tRNA synthetase, class IIc, anti-codon-binding domain (InterPro:IPR018162), Alanyl-tRNA synthetase, class IIc, core domain (InterPro:IPR018165), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), Alanyl-tRNA synthetase, class IIc, N-terminal (InterPro:IPR018164), Phosphoesterase, DHHA1 (InterPro:IPR003156); BEST Arabidopsis thaliana protein match is: Alanyl-tRNA synthetase, class IIc (TAIR:AT5G22800.1). & (gnl|cdd|35409 : 1027.0) no description available & (gnl|cdd|80592 : 883.0) no description available & (reliability: 2838.0) & (original description: Putative ala1, Description = Alanine--tRNA ligase, PFAM = PF01411;PF07973;PF02272)' T '29.1.9' 'protein.aa activation.valine-tRNA ligase' 'nbv0.5scaffold307_267992-280665' '(at1g14610 : 1122.0) Required for proper proliferation of basal cells.; TWIN 2 (TWN2); FUNCTIONS IN: valine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Valyl-tRNA synthetase, class Ia (InterPro:IPR002303), Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Valyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR019754); BEST Arabidopsis thaliana protein match is: ATP binding;valine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases (TAIR:AT5G16715.1); Has 39194 Blast hits to 36732 proteins in 3122 species: Archae - 839; Bacteria - 19755; Metazoa - 1534; Fungi - 892; Plants - 369; Viruses - 3; Other Eukaryotes - 15802 (source: NCBI BLink). & (gnl|cdd|35653 : 1026.0) no description available & (gnl|cdd|81717 : 748.0) no description available & (reliability: 2244.0) & (original description: Putative vars, Description = Valyl-tRNA synthetase, PFAM = PF08264;PF00133)' T '29.1.9' 'protein.aa activation.valine-tRNA ligase' 'nbv0.5scaffold4013_65934-88793' '(at1g14610 : 1452.0) Required for proper proliferation of basal cells.; TWIN 2 (TWN2); FUNCTIONS IN: valine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Valyl-tRNA synthetase, class Ia (InterPro:IPR002303), Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Valyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR019754); BEST Arabidopsis thaliana protein match is: ATP binding;valine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases (TAIR:AT5G16715.1); Has 39194 Blast hits to 36732 proteins in 3122 species: Archae - 839; Bacteria - 19755; Metazoa - 1534; Fungi - 892; Plants - 369; Viruses - 3; Other Eukaryotes - 15802 (source: NCBI BLink). & (gnl|cdd|35653 : 1299.0) no description available & (gnl|cdd|81717 : 1013.0) no description available & (reliability: 2904.0) & (original description: Putative vars, Description = Valyl-tRNA synthetase, PFAM = PF00133;PF08264)' T '29.1.9' 'protein.aa activation.valine-tRNA ligase' 'niben044scf00005744ctg023_1-19314' '(at5g16715 : 730.0) embryo defective 2247 (EMB2247); FUNCTIONS IN: valine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-binding arm (InterPro:IPR010978), Valyl-tRNA synthetase, class Ia (InterPro:IPR002303), Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Valyl-tRNA synthetase, class Ia, tRNA-binding arm (InterPro:IPR019499), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Valyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR019754); BEST Arabidopsis thaliana protein match is: valyl-tRNA synthetase / valine--tRNA ligase (VALRS) (TAIR:AT1G14610.1); Has 40467 Blast hits to 37894 proteins in 3157 species: Archae - 953; Bacteria - 21019; Metazoa - 839; Fungi - 772; Plants - 400; Viruses - 0; Other Eukaryotes - 16484 (source: NCBI BLink). & (gnl|cdd|81717 : 520.0) no description available & (gnl|cdd|35653 : 448.0) no description available & (reliability: 1460.0) & (original description: Putative valS, Description = Valine--tRNA ligase, PFAM = PF10458;PF08264;PF00133;PF00133)' T '29.1.9' 'protein.aa activation.valine-tRNA ligase' 'niben044scf00029001ctg002_7317-13092' '(at1g14610 : 596.0) Required for proper proliferation of basal cells.; TWIN 2 (TWN2); FUNCTIONS IN: valine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Valyl-tRNA synthetase, class Ia (InterPro:IPR002303), Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Valyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR019754); BEST Arabidopsis thaliana protein match is: ATP binding;valine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases (TAIR:AT5G16715.1); Has 39194 Blast hits to 36732 proteins in 3122 species: Archae - 839; Bacteria - 19755; Metazoa - 1534; Fungi - 892; Plants - 369; Viruses - 3; Other Eukaryotes - 15802 (source: NCBI BLink). & (gnl|cdd|35653 : 581.0) no description available & (gnl|cdd|81717 : 493.0) no description available & (reliability: 1192.0) & (original description: Putative vars, Description = Valyl-tRNA synthetase, PFAM = PF00133)' T '29.1.9' 'protein.aa activation.valine-tRNA ligase' 'niben101scf02190_303270-368182' '(at5g16715 : 1543.0) embryo defective 2247 (EMB2247); FUNCTIONS IN: valine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-binding arm (InterPro:IPR010978), Valyl-tRNA synthetase, class Ia (InterPro:IPR002303), Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Valyl-tRNA synthetase, class Ia, tRNA-binding arm (InterPro:IPR019499), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Valyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR019754); BEST Arabidopsis thaliana protein match is: valyl-tRNA synthetase / valine--tRNA ligase (VALRS) (TAIR:AT1G14610.1); Has 40467 Blast hits to 37894 proteins in 3157 species: Archae - 953; Bacteria - 21019; Metazoa - 839; Fungi - 772; Plants - 400; Viruses - 0; Other Eukaryotes - 16484 (source: NCBI BLink). & (gnl|cdd|81717 : 1216.0) no description available & (gnl|cdd|35653 : 1114.0) no description available & (reliability: 3086.0) & (original description: Putative valS, Description = Valine--tRNA ligase, PFAM = PF10458;PF00133;PF08264)' T '29.1.9' 'protein.aa activation.valine-tRNA ligase' 'niben101scf05486_5773-29581' '(at1g14610 : 1507.0) Required for proper proliferation of basal cells.; TWIN 2 (TWN2); FUNCTIONS IN: valine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Valyl-tRNA synthetase, class Ia (InterPro:IPR002303), Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Valyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR019754); BEST Arabidopsis thaliana protein match is: ATP binding;valine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases (TAIR:AT5G16715.1); Has 39194 Blast hits to 36732 proteins in 3122 species: Archae - 839; Bacteria - 19755; Metazoa - 1534; Fungi - 892; Plants - 369; Viruses - 3; Other Eukaryotes - 15802 (source: NCBI BLink). & (gnl|cdd|35653 : 1356.0) no description available & (gnl|cdd|81717 : 1058.0) no description available & (reliability: 3014.0) & (original description: Putative valS1, Description = Probable valine--tRNA ligase, cytoplasmic, PFAM = PF08264;PF00133)' T '29.1.9' 'protein.aa activation.valine-tRNA ligase' 'niben101scf06397_415086-439717' '(at1g14610 : 1512.0) Required for proper proliferation of basal cells.; TWIN 2 (TWN2); FUNCTIONS IN: valine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Valyl-tRNA synthetase, class Ia (InterPro:IPR002303), Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Valyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR019754); BEST Arabidopsis thaliana protein match is: ATP binding;valine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases (TAIR:AT5G16715.1); Has 39194 Blast hits to 36732 proteins in 3122 species: Archae - 839; Bacteria - 19755; Metazoa - 1534; Fungi - 892; Plants - 369; Viruses - 3; Other Eukaryotes - 15802 (source: NCBI BLink). & (gnl|cdd|35653 : 1360.0) no description available & (gnl|cdd|81717 : 1065.0) no description available & (reliability: 3024.0) & (original description: Putative TWN2, Description = Valine--tRNA ligase, mitochondrial 1, PFAM = PF00133;PF08264)' T '29.1.9' 'protein.aa activation.valine-tRNA ligase' 'niben101scf12708_200728-262220' '(at5g16715 : 1553.0) embryo defective 2247 (EMB2247); FUNCTIONS IN: valine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-binding arm (InterPro:IPR010978), Valyl-tRNA synthetase, class Ia (InterPro:IPR002303), Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Valyl-tRNA synthetase, class Ia, tRNA-binding arm (InterPro:IPR019499), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Valyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR019754); BEST Arabidopsis thaliana protein match is: valyl-tRNA synthetase / valine--tRNA ligase (VALRS) (TAIR:AT1G14610.1); Has 40467 Blast hits to 37894 proteins in 3157 species: Archae - 953; Bacteria - 21019; Metazoa - 839; Fungi - 772; Plants - 400; Viruses - 0; Other Eukaryotes - 16484 (source: NCBI BLink). & (gnl|cdd|81717 : 1223.0) no description available & (gnl|cdd|35653 : 1120.0) no description available & (reliability: 3106.0) & (original description: Putative valS, Description = Valine--tRNA ligase, PFAM = PF10458;PF08264;PF00133)' T '29.1.10' 'protein.aa activation.methionine-tRNA ligase' 'niben101scf01146_900657-911397' '(q9zts1|sym_orysa : 1314.0) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (at4g13780 : 1313.0) methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative; FUNCTIONS IN: methionine-tRNA ligase activity, tRNA binding, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion, methionyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Aminoacyl-tRNA synthetase, class I (M) (InterPro:IPR015413), Methionyl-tRNA synthetase, class Ia (InterPro:IPR002304), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Methionyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR014758), tRNA-binding domain (InterPro:IPR002547); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G40660.1); Has 17985 Blast hits to 17920 proteins in 2983 species: Archae - 503; Bacteria - 10276; Metazoa - 591; Fungi - 596; Plants - 228; Viruses - 3; Other Eukaryotes - 5788 (source: NCBI BLink). & (gnl|cdd|36461 : 860.0) no description available & (gnl|cdd|80537 : 664.0) no description available & (reliability: 2626.0) & (original description: Putative mars, Description = Methionine--tRNA ligase, cytoplasmic, PFAM = PF01588;PF09334)' T '29.1.10' 'protein.aa activation.methionine-tRNA ligase' 'niben101scf01171_874311-886650' '(q9zts1|sym_orysa : 1313.0) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (at4g13780 : 1309.0) methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative; FUNCTIONS IN: methionine-tRNA ligase activity, tRNA binding, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion, methionyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Aminoacyl-tRNA synthetase, class I (M) (InterPro:IPR015413), Methionyl-tRNA synthetase, class Ia (InterPro:IPR002304), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Methionyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR014758), tRNA-binding domain (InterPro:IPR002547); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G40660.1); Has 17985 Blast hits to 17920 proteins in 2983 species: Archae - 503; Bacteria - 10276; Metazoa - 591; Fungi - 596; Plants - 228; Viruses - 3; Other Eukaryotes - 5788 (source: NCBI BLink). & (gnl|cdd|36461 : 858.0) no description available & (gnl|cdd|80537 : 664.0) no description available & (reliability: 2618.0) & (original description: Putative mars, Description = Methionine--tRNA ligase, cytoplasmic, PFAM = PF09334;PF01588)' T '29.1.10' 'protein.aa activation.methionine-tRNA ligase' 'niben101scf03306_123892-141557' '(at4g13780 : 1292.0) methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative; FUNCTIONS IN: methionine-tRNA ligase activity, tRNA binding, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion, methionyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Aminoacyl-tRNA synthetase, class I (M) (InterPro:IPR015413), Methionyl-tRNA synthetase, class Ia (InterPro:IPR002304), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Methionyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR014758), tRNA-binding domain (InterPro:IPR002547); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G40660.1); Has 17985 Blast hits to 17920 proteins in 2983 species: Archae - 503; Bacteria - 10276; Metazoa - 591; Fungi - 596; Plants - 228; Viruses - 3; Other Eukaryotes - 5788 (source: NCBI BLink). & (q9zts1|sym_orysa : 1263.0) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (gnl|cdd|36461 : 850.0) no description available & (gnl|cdd|80537 : 663.0) no description available & (reliability: 2584.0) & (original description: Putative mars, Description = Methionine--tRNA ligase, cytoplasmic, PFAM = PF09334;PF01588)' T '29.1.10' 'protein.aa activation.methionine-tRNA ligase' 'niben101scf03306_130256-137797' '(at4g13780 : 556.0) methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative; FUNCTIONS IN: methionine-tRNA ligase activity, tRNA binding, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion, methionyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Aminoacyl-tRNA synthetase, class I (M) (InterPro:IPR015413), Methionyl-tRNA synthetase, class Ia (InterPro:IPR002304), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Methionyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR014758), tRNA-binding domain (InterPro:IPR002547); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G40660.1); Has 17985 Blast hits to 17920 proteins in 2983 species: Archae - 503; Bacteria - 10276; Metazoa - 591; Fungi - 596; Plants - 228; Viruses - 3; Other Eukaryotes - 5788 (source: NCBI BLink). & (q9zts1|sym_orysa : 530.0) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (gnl|cdd|36461 : 497.0) no description available & (gnl|cdd|84042 : 376.0) no description available & (reliability: 1112.0) & (original description: Putative mars, Description = Methionyl-tRNA synthetase, PFAM = PF09334)' T '29.1.10' 'protein.aa activation.methionine-tRNA ligase' 'niben101scf10015_40098-54669' '(at3g55400 : 917.0) OVULE ABORTION 1 (OVA1); FUNCTIONS IN: methionine-tRNA ligase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Methionyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR014758), Aminoacyl-tRNA synthetase, class I (M) (InterPro:IPR015413), Methionyl-tRNA synthetase, class Ia (InterPro:IPR002304), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080); BEST Arabidopsis thaliana protein match is: methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative (TAIR:AT4G13780.1); Has 24900 Blast hits to 23813 proteins in 3001 species: Archae - 930; Bacteria - 15835; Metazoa - 410; Fungi - 530; Plants - 181; Viruses - 3; Other Eukaryotes - 7011 (source: NCBI BLink). & (gnl|cdd|35657 : 698.0) no description available & (gnl|cdd|84023 : 657.0) no description available & (q9zts1|sym_orysa : 174.0) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (reliability: 1834.0) & (original description: Putative OVA1, Description = Methionine--tRNA ligase, chloroplastic/mitochondrial, PFAM = PF09334;PF08264)' T '29.1.11' 'protein.aa activation.serine-tRNA ligase' 'niben044scf00009456ctg019_6095-13012' '(at1g11870 : 665.0) Seryl-tRNA synthetase targeted to chloroplasts and mitochondria. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.; Seryl-tRNA synthetase (SRS); FUNCTIONS IN: serine-tRNA ligase activity; INVOLVED IN: chloroplast organization, mitochondrion organization, seryl-tRNA aminoacylation, tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-binding arm (InterPro:IPR010978), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Seryl-tRNA synthetase, class IIa, N-terminal (InterPro:IPR015866), Seryl-tRNA synthetase, class IIa (InterPro:IPR002317), Ubiquitin supergroup (InterPro:IPR019955), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Seryl-tRNA synthetase, class IIa, C-terminal (InterPro:IPR018156); BEST Arabidopsis thaliana protein match is: seryl-tRNA synthetase / serine--tRNA ligase (TAIR:AT5G27470.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37720 : 491.0) no description available & (gnl|cdd|81585 : 474.0) no description available & (o81983|sys_helan : 223.0) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase) (SerRS) - Helianthus annuus (Common sunflower) & (reliability: 1330.0) & (original description: Putative OVA7, Description = Serine--tRNA ligase, chloroplastic/mitochondrial, PFAM = PF00587;PF02403)' T '29.1.11' 'protein.aa activation.serine-tRNA ligase' 'niben101scf00370_506174-520003' '(o81983|sys_helan : 751.0) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase) (SerRS) - Helianthus annuus (Common sunflower) & (at5g27470 : 712.0) seryl-tRNA synthetase / serine--tRNA ligase; FUNCTIONS IN: serine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion, seryl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-binding arm (InterPro:IPR010978), Seryl-tRNA synthetase, class IIa, N-terminal (InterPro:IPR015866), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Seryl-tRNA synthetase, class IIa (InterPro:IPR002317), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Seryl-tRNA synthetase, class IIa, C-terminal (InterPro:IPR018156); BEST Arabidopsis thaliana protein match is: Seryl-tRNA synthetase (TAIR:AT1G11870.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37720 : 608.0) no description available & (gnl|cdd|81585 : 476.0) no description available & (reliability: 1424.0) & (original description: Putative serS, Description = Serine--tRNA ligase, cytoplasmic, PFAM = PF00587;PF02403)' T '29.1.11' 'protein.aa activation.serine-tRNA ligase' 'niben101scf02367_624293-634292' '(at1g11870 : 686.0) Seryl-tRNA synthetase targeted to chloroplasts and mitochondria. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.; Seryl-tRNA synthetase (SRS); FUNCTIONS IN: serine-tRNA ligase activity; INVOLVED IN: chloroplast organization, mitochondrion organization, seryl-tRNA aminoacylation, tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-binding arm (InterPro:IPR010978), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Seryl-tRNA synthetase, class IIa, N-terminal (InterPro:IPR015866), Seryl-tRNA synthetase, class IIa (InterPro:IPR002317), Ubiquitin supergroup (InterPro:IPR019955), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Seryl-tRNA synthetase, class IIa, C-terminal (InterPro:IPR018156); BEST Arabidopsis thaliana protein match is: seryl-tRNA synthetase / serine--tRNA ligase (TAIR:AT5G27470.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37720 : 498.0) no description available & (gnl|cdd|81585 : 481.0) no description available & (o81983|sys_helan : 230.0) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase) (SerRS) - Helianthus annuus (Common sunflower) & (reliability: 1372.0) & (original description: Putative OVA7, Description = Serine--tRNA ligase, chloroplastic/mitochondrial, PFAM = PF00587;PF02403)' T '29.1.11' 'protein.aa activation.serine-tRNA ligase' 'niben101scf10053_139656-148942' '(o81983|sys_helan : 751.0) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase) (SerRS) - Helianthus annuus (Common sunflower) & (at5g27470 : 717.0) seryl-tRNA synthetase / serine--tRNA ligase; FUNCTIONS IN: serine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion, seryl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-binding arm (InterPro:IPR010978), Seryl-tRNA synthetase, class IIa, N-terminal (InterPro:IPR015866), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Seryl-tRNA synthetase, class IIa (InterPro:IPR002317), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Seryl-tRNA synthetase, class IIa, C-terminal (InterPro:IPR018156); BEST Arabidopsis thaliana protein match is: Seryl-tRNA synthetase (TAIR:AT1G11870.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37720 : 610.0) no description available & (gnl|cdd|81585 : 474.0) no description available & (reliability: 1434.0) & (original description: Putative sars, Description = Seryl-tRNA synthetase, PFAM = PF00587;PF02403)' T '29.1.12' 'protein.aa activation.aspartate-tRNA ligase' 'nbv0.5scaffold4254_95677-110728' '(gnl|cdd|35776 : 736.0) no description available & (at4g31180 : 716.0) Class II aminoacyl-tRNA and biotin synthetases superfamily protein; FUNCTIONS IN: aminoacyl-tRNA ligase activity, aspartate-tRNA ligase activity, nucleotide binding, ATP binding, nucleic acid binding; INVOLVED IN: response to cadmium ion, aspartyl-tRNA aminoacylation; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aspartyl-tRNA synthetase, class IIb, archea/euk type (InterPro:IPR004523), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT4G26870.1); Has 27000 Blast hits to 21362 proteins in 2984 species: Archae - 448; Bacteria - 18821; Metazoa - 751; Fungi - 935; Plants - 402; Viruses - 0; Other Eukaryotes - 5643 (source: NCBI BLink). & (gnl|cdd|29821 : 409.0) no description available & (q6f2u9|syk_orysa : 81.6) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Oryza sativa (Rice) & (reliability: 1432.0) & (original description: Putative IBI1, Description = Aspartate--tRNA ligase 2, cytoplasmic, PFAM = PF00152;PF01336)' T '29.1.12' 'protein.aa activation.aspartate-tRNA ligase' 'niben101scf00953_599768-612660' '(at4g33760 : 983.0) tRNA synthetase class II (D, K and N) family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: aspartyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, chloroplast, membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type (InterPro:IPR004524), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150), Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type, C-terminal (InterPro:IPR018153), GAD domain (InterPro:IPR004115); BEST Arabidopsis thaliana protein match is: Lysyl-tRNA synthetase, class II (TAIR:AT3G13490.1); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (gnl|cdd|80684 : 853.0) no description available & (gnl|cdd|37622 : 736.0) no description available & (reliability: 1966.0) & (original description: Putative aspS, Description = Aspartyl-tRNA synthetase, PFAM = PF00152;PF02938;PF01336)' T '29.1.12' 'protein.aa activation.aspartate-tRNA ligase' 'niben101scf04487_689101-698393' '(gnl|cdd|35776 : 741.0) no description available & (at4g31180 : 720.0) Class II aminoacyl-tRNA and biotin synthetases superfamily protein; FUNCTIONS IN: aminoacyl-tRNA ligase activity, aspartate-tRNA ligase activity, nucleotide binding, ATP binding, nucleic acid binding; INVOLVED IN: response to cadmium ion, aspartyl-tRNA aminoacylation; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aspartyl-tRNA synthetase, class IIb, archea/euk type (InterPro:IPR004523), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT4G26870.1); Has 27000 Blast hits to 21362 proteins in 2984 species: Archae - 448; Bacteria - 18821; Metazoa - 751; Fungi - 935; Plants - 402; Viruses - 0; Other Eukaryotes - 5643 (source: NCBI BLink). & (gnl|cdd|29821 : 417.0) no description available & (q6f2u9|syk_orysa : 85.5) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Oryza sativa (Rice) & (reliability: 1440.0) & (original description: Putative dars, Description = MGC80207 protein, PFAM = PF01336;PF00152)' T '29.1.13' 'protein.aa activation.tryptophan-tRNA ligase' '' '' '29.1.14' 'protein.aa activation.glycine-tRNA ligase' 'nbv0.5scaffold4293_109937-116911' '(at1g29880 : 1004.0) glycyl-tRNA synthetase / glycine--tRNA ligase; FUNCTIONS IN: glycine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: response to cadmium ion, glycyl-tRNA aminoacylation; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Glycyl-tRNA synthetase, alpha2 dimer (InterPro:IPR002315), S15/NS1, RNA-binding (InterPro:IPR009068), Glycyl-tRNA synthetase, alpha2 dimer, C-terminal (InterPro:IPR018160), Anticodon-binding (InterPro:IPR004154), WHEP-TRS (InterPro:IPR000738), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: tRNA synthetase class II (G, H, P and S) family protein (TAIR:AT1G29870.1); Has 6392 Blast hits to 4464 proteins in 1181 species: Archae - 269; Bacteria - 3324; Metazoa - 242; Fungi - 171; Plants - 75; Viruses - 0; Other Eukaryotes - 2311 (source: NCBI BLink). & (gnl|cdd|37509 : 833.0) no description available & (gnl|cdd|30772 : 596.0) no description available & (reliability: 2008.0) & (original description: Putative gars, Description = Glycyl-tRNA synthetase, PFAM = PF00587;PF03129)' T '29.1.14' 'protein.aa activation.glycine-tRNA ligase' 'niben101scf01818_549334-559267' '(at1g29880 : 1106.0) glycyl-tRNA synthetase / glycine--tRNA ligase; FUNCTIONS IN: glycine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: response to cadmium ion, glycyl-tRNA aminoacylation; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Glycyl-tRNA synthetase, alpha2 dimer (InterPro:IPR002315), S15/NS1, RNA-binding (InterPro:IPR009068), Glycyl-tRNA synthetase, alpha2 dimer, C-terminal (InterPro:IPR018160), Anticodon-binding (InterPro:IPR004154), WHEP-TRS (InterPro:IPR000738), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: tRNA synthetase class II (G, H, P and S) family protein (TAIR:AT1G29870.1); Has 6392 Blast hits to 4464 proteins in 1181 species: Archae - 269; Bacteria - 3324; Metazoa - 242; Fungi - 171; Plants - 75; Viruses - 0; Other Eukaryotes - 2311 (source: NCBI BLink). & (gnl|cdd|37509 : 874.0) no description available & (gnl|cdd|30772 : 640.0) no description available & (reliability: 2212.0) & (original description: Putative gars, Description = Glycyl-tRNA synthetase, PFAM = PF00587;PF03129;PF00458)' T '29.1.14' 'protein.aa activation.glycine-tRNA ligase' 'niben101scf02407_1417777-1480171' '(at3g48110 : 1501.0) glycine-tRNA ligase; EMBRYO-DEFECTIVE-DEVELOPMENT 1 (EDD1); FUNCTIONS IN: glycine-tRNA ligase activity; INVOLVED IN: regulation of embryonic development, glycyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycyl-tRNA synthetase, class IIc, beta subunit, N-terminal (InterPro:IPR002311), Glycyl-tRNA synthetase, class II, heterodimeric (InterPro:IPR006194), Glycyl-tRNA synthetase, class IIc, beta subunit (InterPro:IPR015944), Glycyl-tRNA synthetase, class IIc, alpha subunit (InterPro:IPR002310); Has 11308 Blast hits to 11293 proteins in 1754 species: Archae - 4; Bacteria - 6864; Metazoa - 4; Fungi - 1; Plants - 40; Viruses - 0; Other Eukaryotes - 4395 (source: NCBI BLink). & (gnl|cdd|80846 : 636.0) no description available & (reliability: 3002.0) & (original description: Putative EDD1, Description = Glycine--tRNA ligase, chloroplastic/mitochondrial 2, PFAM = PF02092;PF02091)' T '29.1.14' 'protein.aa activation.glycine-tRNA ligase' 'niben101scf03548_168273-176588' '(at1g29880 : 1051.0) glycyl-tRNA synthetase / glycine--tRNA ligase; FUNCTIONS IN: glycine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: response to cadmium ion, glycyl-tRNA aminoacylation; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Glycyl-tRNA synthetase, alpha2 dimer (InterPro:IPR002315), S15/NS1, RNA-binding (InterPro:IPR009068), Glycyl-tRNA synthetase, alpha2 dimer, C-terminal (InterPro:IPR018160), Anticodon-binding (InterPro:IPR004154), WHEP-TRS (InterPro:IPR000738), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: tRNA synthetase class II (G, H, P and S) family protein (TAIR:AT1G29870.1); Has 6392 Blast hits to 4464 proteins in 1181 species: Archae - 269; Bacteria - 3324; Metazoa - 242; Fungi - 171; Plants - 75; Viruses - 0; Other Eukaryotes - 2311 (source: NCBI BLink). & (gnl|cdd|37509 : 873.0) no description available & (gnl|cdd|30772 : 624.0) no description available & (reliability: 2102.0) & (original description: Putative gars, Description = Glycyl-tRNA synthetase, PFAM = PF03129;PF00587)' T '29.1.15' 'protein.aa activation.proline-tRNA ligase' 'nbv0.3scaffold57691_2416-12411' '(at1g44835 : 315.0) YbaK/aminoacyl-tRNA synthetase-associated domain; CONTAINS InterPro DOMAIN/s: YbaK/aminoacyl-tRNA synthetase-associated domain (InterPro:IPR007214); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33555 : 124.0) no description available & (reliability: 630.0) & (original description: Putative At1g44835, Description = YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein, PFAM = PF04073)' T '29.1.15' 'protein.aa activation.proline-tRNA ligase' 'niben101scf01180_719651-731080' '(at1g44835 : 311.0) YbaK/aminoacyl-tRNA synthetase-associated domain; CONTAINS InterPro DOMAIN/s: YbaK/aminoacyl-tRNA synthetase-associated domain (InterPro:IPR007214); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33555 : 129.0) no description available & (reliability: 622.0) & (original description: Putative At1g44835, Description = YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein, PFAM = PF04073)' T '29.1.15' 'protein.aa activation.proline-tRNA ligase' 'niben101scf03374_396135-410712' '(at4g16510 : 316.0) YbaK/aminoacyl-tRNA synthetase-associated domain; CONTAINS InterPro DOMAIN/s: YbaK/aminoacyl-tRNA synthetase-associated domain (InterPro:IPR007214); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 632.0) & (original description: Putative BnaAnng27600D, Description = BnaAnng27600D protein, PFAM = PF04073)' T '29.1.15' 'protein.aa activation.proline-tRNA ligase' 'niben101scf03374_406844-410889' '(at4g16510 : 239.0) YbaK/aminoacyl-tRNA synthetase-associated domain; CONTAINS InterPro DOMAIN/s: YbaK/aminoacyl-tRNA synthetase-associated domain (InterPro:IPR007214); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 478.0) & (original description: Putative ZOSMA_85G00650, Description = Proline--tRNA ligase, PFAM = PF04073)' T '29.1.16' 'protein.aa activation.cysteine-tRNA ligase' 'niben101scf02706_155613-168002' '(at2g31170 : 828.0) SYCO ARATH; FUNCTIONS IN: cysteine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: cysteinyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cysteinyl-tRNA synthetase, class Ia (InterPro:IPR002308), Cysteinyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR015803), Cysteinyl-tRNA synthetase, class Ia, DALR (InterPro:IPR015273), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Cysteinyl-tRNA synthetase, class Ia, C-terminal (InterPro:IPR015804); BEST Arabidopsis thaliana protein match is: Cysteinyl-tRNA synthetase, class Ia family protein (TAIR:AT5G38830.1); Has 10676 Blast hits to 10676 proteins in 2860 species: Archae - 252; Bacteria - 6117; Metazoa - 332; Fungi - 154; Plants - 139; Viruses - 3; Other Eukaryotes - 3679 (source: NCBI BLink). & (gnl|cdd|80596 : 642.0) no description available & (gnl|cdd|37218 : 595.0) no description available & (reliability: 1656.0) & (original description: Putative SYCO, Description = Cysteine--tRNA ligase, chloroplastic/mitochondrial, PFAM = PF01406;PF09190)' T '29.1.16' 'protein.aa activation.cysteine-tRNA ligase' 'niben101scf17831_131090-139377' '(at5g38830 : 642.0) Cysteinyl-tRNA synthetase, class Ia family protein; FUNCTIONS IN: cysteine-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion, cysteinyl-tRNA aminoacylation; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cysteinyl-tRNA synthetase, class Ia (InterPro:IPR002308), Cysteinyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR015803), Cysteinyl-tRNA synthetase, class Ia, C-terminal (InterPro:IPR015804); BEST Arabidopsis thaliana protein match is: Cysteinyl-tRNA synthetase, class Ia family protein (TAIR:AT3G56300.1); Has 11267 Blast hits to 10945 proteins in 2873 species: Archae - 213; Bacteria - 6070; Metazoa - 419; Fungi - 280; Plants - 139; Viruses - 3; Other Eukaryotes - 4143 (source: NCBI BLink). & (gnl|cdd|80596 : 632.0) no description available & (gnl|cdd|37218 : 571.0) no description available & (reliability: 1284.0) & (original description: Putative cysS, Description = Cysteine--tRNA ligase, PFAM = PF01406)' T '29.1.17' 'protein.aa activation.glutamate-tRNA ligase' 'nbv0.5scaffold521_427654-449608' '(q43794|sye_tobac : 1108.0) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase) (GluRS) - Nicotiana tabacum (Common tobacco) & (at5g64050 : 870.0) Glutamate-tRNA ligase. Targeted to mitochondria and chloroplast. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.; glutamate tRNA synthetase (ERS); FUNCTIONS IN: protein binding, glutamate-tRNA ligase activity; INVOLVED IN: chloroplast organization, glutamyl-tRNA aminoacylation, mitochondrion organization, tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial (InterPro:IPR004527), Glutamyl/glutaminyl-tRNA synthetase, class Ic, N-terminal (InterPro:IPR020060), Aminoacyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR008925), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 (InterPro:IPR020751); BEST Arabidopsis thaliana protein match is: Glutamyl/glutaminyl-tRNA synthetase, class Ic (TAIR:AT5G26710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36364 : 611.0) no description available & (gnl|cdd|80878 : 558.0) no description available & (reliability: 1740.0) & (original description: Putative glnS, Description = Glutamate--tRNA ligase, PFAM = PF00749)' T '29.1.17' 'protein.aa activation.glutamate-tRNA ligase' 'nbv0.5scaffold4360_142213-160828' '(q43794|sye_tobac : 1070.0) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase) (GluRS) - Nicotiana tabacum (Common tobacco) & (at5g64050 : 834.0) Glutamate-tRNA ligase. Targeted to mitochondria and chloroplast. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.; glutamate tRNA synthetase (ERS); FUNCTIONS IN: protein binding, glutamate-tRNA ligase activity; INVOLVED IN: chloroplast organization, glutamyl-tRNA aminoacylation, mitochondrion organization, tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial (InterPro:IPR004527), Glutamyl/glutaminyl-tRNA synthetase, class Ic, N-terminal (InterPro:IPR020060), Aminoacyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR008925), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 (InterPro:IPR020751); BEST Arabidopsis thaliana protein match is: Glutamyl/glutaminyl-tRNA synthetase, class Ic (TAIR:AT5G26710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36364 : 590.0) no description available & (gnl|cdd|80878 : 544.0) no description available & (reliability: 1668.0) & (original description: Putative glnS, Description = Glutamate--tRNA ligase, PFAM = PF00749)' T '29.1.17' 'protein.aa activation.glutamate-tRNA ligase' 'niben044scf00001597ctg011_1038-4211' '(q43794|sye_tobac : 296.0) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase) (GluRS) - Nicotiana tabacum (Common tobacco) & (at5g64050 : 202.0) Glutamate-tRNA ligase. Targeted to mitochondria and chloroplast. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.; glutamate tRNA synthetase (ERS); FUNCTIONS IN: protein binding, glutamate-tRNA ligase activity; INVOLVED IN: chloroplast organization, glutamyl-tRNA aminoacylation, mitochondrion organization, tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial (InterPro:IPR004527), Glutamyl/glutaminyl-tRNA synthetase, class Ic, N-terminal (InterPro:IPR020060), Aminoacyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR008925), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 (InterPro:IPR020751); BEST Arabidopsis thaliana protein match is: Glutamyl/glutaminyl-tRNA synthetase, class Ic (TAIR:AT5G26710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36364 : 82.3) no description available & (reliability: 404.0) & (original description: Putative OVA3, Description = Glutamate--tRNA ligase, chloroplastic/mitochondrial, PFAM = )' T '29.1.17' 'protein.aa activation.glutamate-tRNA ligase' 'niben044scf00005109ctg010_8775-17751' '(at5g26710 : 1109.0) Glutamyl/glutaminyl-tRNA synthetase, class Ic; FUNCTIONS IN: glutamate-tRNA ligase activity; INVOLVED IN: glutamyl-tRNA aminoacylation, translation, tRNA aminoacylation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain (InterPro:IPR020056), Glutamyl/glutaminyl-tRNA synthetase, class Ic, N-terminal (InterPro:IPR020060), Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (InterPro:IPR011035), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutamyl-tRNA synthetase, class Ic, archaeal/eukaryotic cytosolic (InterPro:IPR004526), Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain (InterPro:IPR020059); BEST Arabidopsis thaliana protein match is: glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative (TAIR:AT1G25350.1); Has 14411 Blast hits to 14402 proteins in 2977 species: Archae - 262; Bacteria - 9488; Metazoa - 657; Fungi - 449; Plants - 238; Viruses - 0; Other Eukaryotes - 3317 (source: NCBI BLink). & (gnl|cdd|36362 : 946.0) no description available & (gnl|cdd|81539 : 374.0) no description available & (p52780|syq_luplu : 239.0) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA ligase) (GlnRS) - Lupinus luteus (European yellow lupin) & (reliability: 2218.0) & (original description: Putative eprs, Description = Glutamate-tRNA ligase, PFAM = PF03950;PF00749)' T '29.1.17' 'protein.aa activation.glutamate-tRNA ligase' 'niben101scf01670_411482-432330' '(q43794|sye_tobac : 1093.0) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase) (GluRS) - Nicotiana tabacum (Common tobacco) & (at5g64050 : 859.0) Glutamate-tRNA ligase. Targeted to mitochondria and chloroplast. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.; glutamate tRNA synthetase (ERS); FUNCTIONS IN: protein binding, glutamate-tRNA ligase activity; INVOLVED IN: chloroplast organization, glutamyl-tRNA aminoacylation, mitochondrion organization, tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial (InterPro:IPR004527), Glutamyl/glutaminyl-tRNA synthetase, class Ic, N-terminal (InterPro:IPR020060), Aminoacyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR008925), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 (InterPro:IPR020751); BEST Arabidopsis thaliana protein match is: Glutamyl/glutaminyl-tRNA synthetase, class Ic (TAIR:AT5G26710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36364 : 603.0) no description available & (gnl|cdd|80878 : 549.0) no description available & (reliability: 1718.0) & (original description: Putative glnS, Description = Glutamate--tRNA ligase, PFAM = PF00749)' T '29.1.17' 'protein.aa activation.glutamate-tRNA ligase' 'niben101scf03004_316070-336609' '(q43794|sye_tobac : 1105.0) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase) (GluRS) - Nicotiana tabacum (Common tobacco) & (at5g64050 : 866.0) Glutamate-tRNA ligase. Targeted to mitochondria and chloroplast. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.; glutamate tRNA synthetase (ERS); FUNCTIONS IN: protein binding, glutamate-tRNA ligase activity; INVOLVED IN: chloroplast organization, glutamyl-tRNA aminoacylation, mitochondrion organization, tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial (InterPro:IPR004527), Glutamyl/glutaminyl-tRNA synthetase, class Ic, N-terminal (InterPro:IPR020060), Aminoacyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR008925), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 (InterPro:IPR020751); BEST Arabidopsis thaliana protein match is: Glutamyl/glutaminyl-tRNA synthetase, class Ic (TAIR:AT5G26710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36364 : 610.0) no description available & (gnl|cdd|80878 : 557.0) no description available & (reliability: 1732.0) & (original description: Putative glnS, Description = Glutamate--tRNA ligase, PFAM = PF00749)' T '29.1.17' 'protein.aa activation.glutamate-tRNA ligase' 'niben101scf05932_349446-360813' '(at5g26710 : 1121.0) Glutamyl/glutaminyl-tRNA synthetase, class Ic; FUNCTIONS IN: glutamate-tRNA ligase activity; INVOLVED IN: glutamyl-tRNA aminoacylation, translation, tRNA aminoacylation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain (InterPro:IPR020056), Glutamyl/glutaminyl-tRNA synthetase, class Ic, N-terminal (InterPro:IPR020060), Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (InterPro:IPR011035), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutamyl-tRNA synthetase, class Ic, archaeal/eukaryotic cytosolic (InterPro:IPR004526), Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain (InterPro:IPR020059); BEST Arabidopsis thaliana protein match is: glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative (TAIR:AT1G25350.1); Has 14411 Blast hits to 14402 proteins in 2977 species: Archae - 262; Bacteria - 9488; Metazoa - 657; Fungi - 449; Plants - 238; Viruses - 0; Other Eukaryotes - 3317 (source: NCBI BLink). & (gnl|cdd|36362 : 949.0) no description available & (gnl|cdd|81539 : 374.0) no description available & (p52780|syq_luplu : 239.0) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA ligase) (GlnRS) - Lupinus luteus (European yellow lupin) & (reliability: 2242.0) & (original description: Putative eprs, Description = Glutamate-tRNA ligase, PFAM = PF00749;PF03950)' T '29.1.18' 'protein.aa activation.glutamine-tRNA ligase' 'niben044scf00002598ctg004_47689-51004' '(p52780|syq_luplu : 187.0) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA ligase) (GlnRS) - Lupinus luteus (European yellow lupin) & (at1g25350 : 186.0) ovule abortion 9 (OVA9); CONTAINS InterPro DOMAIN/s: Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain (InterPro:IPR020056), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Glutaminyl-tRNA synthetase, class Ic, non-specific RNA-binding region part 1 (InterPro:IPR007639), Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (InterPro:IPR011035), Glutaminyl-tRNA synthetase, class Ic, non-specific RNA-binding region part 2 (InterPro:IPR007638), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Glutaminyl-tRNA synthetase, class Ic (InterPro:IPR004514), Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain (InterPro:IPR020059); BEST Arabidopsis thaliana protein match is: Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (TAIR:AT5G19720.1). & (gnl|cdd|86684 : 157.0) no description available & (gnl|cdd|36363 : 152.0) no description available & (reliability: 372.0) & (original description: Putative BnaC03g64100D, Description = BnaC03g64100D protein, PFAM = PF04558)' T '29.1.18' 'protein.aa activation.glutamine-tRNA ligase' 'niben044scf00002598ctg005_2793-10341' '(p52780|syq_luplu : 1070.0) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA ligase) (GlnRS) - Lupinus luteus (European yellow lupin) & (at1g25350 : 1026.0) ovule abortion 9 (OVA9); CONTAINS InterPro DOMAIN/s: Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain (InterPro:IPR020056), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Glutaminyl-tRNA synthetase, class Ic, non-specific RNA-binding region part 1 (InterPro:IPR007639), Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (InterPro:IPR011035), Glutaminyl-tRNA synthetase, class Ic, non-specific RNA-binding region part 2 (InterPro:IPR007638), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Glutaminyl-tRNA synthetase, class Ic (InterPro:IPR004514), Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain (InterPro:IPR020059); BEST Arabidopsis thaliana protein match is: Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (TAIR:AT5G19720.1). & (gnl|cdd|36363 : 871.0) no description available & (gnl|cdd|81539 : 683.0) no description available & (reliability: 2052.0) & (original description: Putative cinA, Description = Glutaminyl-tRNA synthetase, PFAM = PF03950;PF00749;PF04557)' T '29.1.18' 'protein.aa activation.glutamine-tRNA ligase' 'niben101scf14118_26911-40714' '(p52780|syq_luplu : 1263.0) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA ligase) (GlnRS) - Lupinus luteus (European yellow lupin) & (at1g25350 : 1229.0) ovule abortion 9 (OVA9); CONTAINS InterPro DOMAIN/s: Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain (InterPro:IPR020056), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Glutaminyl-tRNA synthetase, class Ic, non-specific RNA-binding region part 1 (InterPro:IPR007639), Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (InterPro:IPR011035), Glutaminyl-tRNA synthetase, class Ic, non-specific RNA-binding region part 2 (InterPro:IPR007638), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Glutaminyl-tRNA synthetase, class Ic (InterPro:IPR004514), Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain (InterPro:IPR020059); BEST Arabidopsis thaliana protein match is: Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (TAIR:AT5G19720.1). & (gnl|cdd|36363 : 1020.0) no description available & (gnl|cdd|81539 : 687.0) no description available & (reliability: 2458.0) & (original description: Putative cinA, Description = Putative glutamine--tRNA ligase, PFAM = PF03950;PF04558;PF04557;PF00749)' T '29.1.19' 'protein.aa activation.arginine-tRNA ligase' 'nbv0.3scaffold69297_34-9473' '(at4g26300 : 959.0) embryo defective 1027 (emb1027); FUNCTIONS IN: nucleotide binding, aminoacyl-tRNA ligase activity, arginine-tRNA ligase activity, ATP binding; INVOLVED IN: arginyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), DALR anticodon binding (InterPro:IPR008909), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Arginyl-tRNA synthetase, class Ic, core (InterPro:IPR015945), Arginyl tRNA synthetase, class Ic, N-terminal (InterPro:IPR005148), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Arginyl-tRNA synthetase, class Ic (InterPro:IPR001278); BEST Arabidopsis thaliana protein match is: Arginyl-tRNA synthetase, class Ic (TAIR:AT1G66530.1); Has 9418 Blast hits to 9310 proteins in 2828 species: Archae - 263; Bacteria - 5535; Metazoa - 273; Fungi - 189; Plants - 85; Viruses - 3; Other Eukaryotes - 3070 (source: NCBI BLink). & (gnl|cdd|39627 : 867.0) no description available & (gnl|cdd|80884 : 536.0) no description available & (reliability: 1918.0) & (original description: Putative argS, Description = Arginyl-tRNA synthetase-like protein, PFAM = PF03485;PF00750;PF05746)' T '29.1.19' 'protein.aa activation.arginine-tRNA ligase' 'nbv0.5scaffold8024_706-15684' '(at4g26300 : 933.0) embryo defective 1027 (emb1027); FUNCTIONS IN: nucleotide binding, aminoacyl-tRNA ligase activity, arginine-tRNA ligase activity, ATP binding; INVOLVED IN: arginyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), DALR anticodon binding (InterPro:IPR008909), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Arginyl-tRNA synthetase, class Ic, core (InterPro:IPR015945), Arginyl tRNA synthetase, class Ic, N-terminal (InterPro:IPR005148), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Arginyl-tRNA synthetase, class Ic (InterPro:IPR001278); BEST Arabidopsis thaliana protein match is: Arginyl-tRNA synthetase, class Ic (TAIR:AT1G66530.1); Has 9418 Blast hits to 9310 proteins in 2828 species: Archae - 263; Bacteria - 5535; Metazoa - 273; Fungi - 189; Plants - 85; Viruses - 3; Other Eukaryotes - 3070 (source: NCBI BLink). & (gnl|cdd|39627 : 856.0) no description available & (gnl|cdd|80884 : 530.0) no description available & (reliability: 1866.0) & (original description: Putative argS, Description = Arginyl-tRNA synthetase, PFAM = PF00750;PF05746;PF03485)' T '29.1.19' 'protein.aa activation.arginine-tRNA ligase' 'niben044scf00044457ctg000_1423-9624' '(at5g05700 : 549.0) Encodes an arginyl-tRNA:protein transferase (ATE1), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. Another component of the N-end rule pathway is At5g02310/PROTEOLYSIS6 (PRT6). PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination. Mutants of ATE1 also display delayed leaf senescence.; arginine-tRNA protein transferase 1 (ATE1); CONTAINS InterPro DOMAIN/s: Arginine-tRNA-protein transferase, N-terminal (InterPro:IPR007471), Arginine-tRNA-protein transferase 1, eukaryotic (InterPro:IPR017137), Arginine-tRNA-protein transferase, C-terminal (InterPro:IPR007472); BEST Arabidopsis thaliana protein match is: arginine-tRNA protein transferase 2 (TAIR:AT3G11240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36407 : 450.0) no description available & (gnl|cdd|67968 : 209.0) no description available & (reliability: 1098.0) & (original description: Putative ATE1, Description = Arginyl-tRNA--protein transferase 1, PFAM = PF04377;PF04376)' T '29.1.19' 'protein.aa activation.arginine-tRNA ligase' 'niben044scf00054590ctg000_2729-11135' '(at4g26300 : 877.0) embryo defective 1027 (emb1027); FUNCTIONS IN: nucleotide binding, aminoacyl-tRNA ligase activity, arginine-tRNA ligase activity, ATP binding; INVOLVED IN: arginyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), DALR anticodon binding (InterPro:IPR008909), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Arginyl-tRNA synthetase, class Ic, core (InterPro:IPR015945), Arginyl tRNA synthetase, class Ic, N-terminal (InterPro:IPR005148), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Arginyl-tRNA synthetase, class Ic (InterPro:IPR001278); BEST Arabidopsis thaliana protein match is: Arginyl-tRNA synthetase, class Ic (TAIR:AT1G66530.1); Has 9418 Blast hits to 9310 proteins in 2828 species: Archae - 263; Bacteria - 5535; Metazoa - 273; Fungi - 189; Plants - 85; Viruses - 3; Other Eukaryotes - 3070 (source: NCBI BLink). & (gnl|cdd|39627 : 794.0) no description available & (gnl|cdd|80884 : 478.0) no description available & (reliability: 1754.0) & (original description: Putative argS, Description = Arginyl-tRNA synthetase-like protein, PFAM = PF00750;PF03485;PF05746)' T '29.1.19' 'protein.aa activation.arginine-tRNA ligase' 'niben101scf01927_485738-496878' '(at4g26300 : 959.0) embryo defective 1027 (emb1027); FUNCTIONS IN: nucleotide binding, aminoacyl-tRNA ligase activity, arginine-tRNA ligase activity, ATP binding; INVOLVED IN: arginyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), DALR anticodon binding (InterPro:IPR008909), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Arginyl-tRNA synthetase, class Ic, core (InterPro:IPR015945), Arginyl tRNA synthetase, class Ic, N-terminal (InterPro:IPR005148), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Arginyl-tRNA synthetase, class Ic (InterPro:IPR001278); BEST Arabidopsis thaliana protein match is: Arginyl-tRNA synthetase, class Ic (TAIR:AT1G66530.1); Has 9418 Blast hits to 9310 proteins in 2828 species: Archae - 263; Bacteria - 5535; Metazoa - 273; Fungi - 189; Plants - 85; Viruses - 3; Other Eukaryotes - 3070 (source: NCBI BLink). & (gnl|cdd|39627 : 869.0) no description available & (gnl|cdd|80884 : 536.0) no description available & (reliability: 1918.0) & (original description: Putative argS, Description = Arginyl-tRNA synthetase-like protein, PFAM = PF03485;PF05746;PF00750)' T '29.1.19' 'protein.aa activation.arginine-tRNA ligase' 'niben101scf03307_4654-23427' '(at4g26300 : 928.0) embryo defective 1027 (emb1027); FUNCTIONS IN: nucleotide binding, aminoacyl-tRNA ligase activity, arginine-tRNA ligase activity, ATP binding; INVOLVED IN: arginyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), DALR anticodon binding (InterPro:IPR008909), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Arginyl-tRNA synthetase, class Ic, core (InterPro:IPR015945), Arginyl tRNA synthetase, class Ic, N-terminal (InterPro:IPR005148), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Arginyl-tRNA synthetase, class Ic (InterPro:IPR001278); BEST Arabidopsis thaliana protein match is: Arginyl-tRNA synthetase, class Ic (TAIR:AT1G66530.1); Has 9418 Blast hits to 9310 proteins in 2828 species: Archae - 263; Bacteria - 5535; Metazoa - 273; Fungi - 189; Plants - 85; Viruses - 3; Other Eukaryotes - 3070 (source: NCBI BLink). & (gnl|cdd|39627 : 854.0) no description available & (gnl|cdd|80884 : 528.0) no description available & (reliability: 1856.0) & (original description: Putative argS, Description = Arginyl-tRNA synthetase-like protein, PFAM = PF05746;PF00750;PF03485)' T '29.1.19' 'protein.aa activation.arginine-tRNA ligase' 'niben101scf03307_16931-21651' '(at4g26300 : 179.0) embryo defective 1027 (emb1027); FUNCTIONS IN: nucleotide binding, aminoacyl-tRNA ligase activity, arginine-tRNA ligase activity, ATP binding; INVOLVED IN: arginyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), DALR anticodon binding (InterPro:IPR008909), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Arginyl-tRNA synthetase, class Ic, core (InterPro:IPR015945), Arginyl tRNA synthetase, class Ic, N-terminal (InterPro:IPR005148), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Arginyl-tRNA synthetase, class Ic (InterPro:IPR001278); BEST Arabidopsis thaliana protein match is: Arginyl-tRNA synthetase, class Ic (TAIR:AT1G66530.1); Has 9418 Blast hits to 9310 proteins in 2828 species: Archae - 263; Bacteria - 5535; Metazoa - 273; Fungi - 189; Plants - 85; Viruses - 3; Other Eukaryotes - 3070 (source: NCBI BLink). & (gnl|cdd|39627 : 165.0) no description available & (gnl|cdd|80884 : 92.9) no description available & (reliability: 358.0) & (original description: Putative argS, Description = Arginyl-tRNA synthetase, PFAM = PF00750;PF00750)' T '29.1.19' 'protein.aa activation.arginine-tRNA ligase' 'niben101scf04044_323834-332993' '(at5g05700 : 551.0) Encodes an arginyl-tRNA:protein transferase (ATE1), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. Another component of the N-end rule pathway is At5g02310/PROTEOLYSIS6 (PRT6). PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination. Mutants of ATE1 also display delayed leaf senescence.; arginine-tRNA protein transferase 1 (ATE1); CONTAINS InterPro DOMAIN/s: Arginine-tRNA-protein transferase, N-terminal (InterPro:IPR007471), Arginine-tRNA-protein transferase 1, eukaryotic (InterPro:IPR017137), Arginine-tRNA-protein transferase, C-terminal (InterPro:IPR007472); BEST Arabidopsis thaliana protein match is: arginine-tRNA protein transferase 2 (TAIR:AT3G11240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36407 : 443.0) no description available & (gnl|cdd|67968 : 209.0) no description available & (reliability: 1102.0) & (original description: Putative ATE1, Description = Arginyl-tRNA--protein transferase 1, PFAM = PF04377;PF04376)' T '29.1.19' 'protein.aa activation.arginine-tRNA ligase' 'niben101scf06926_666642-674947' '(at3g11240 : 152.0) Encodes an arginyl-tRNA:protein arginyltransferase (ATE2), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. Another component of the N-end rule pathway is At5g02310/PROTEOLYSIS6 (PRT6). PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination.; arginine-tRNA protein transferase 2 (ATE2); FUNCTIONS IN: arginyltransferase activity; INVOLVED IN: regulation of seed germination, regulation of lipid catabolic process, protein arginylation, response to abscisic acid stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Arginine-tRNA-protein transferase, N-terminal (InterPro:IPR007471), Arginine-tRNA-protein transferase 1, eukaryotic (InterPro:IPR017137), Arginine-tRNA-protein transferase, C-terminal (InterPro:IPR007472); BEST Arabidopsis thaliana protein match is: arginine-tRNA protein transferase 1 (TAIR:AT5G05700.1); Has 2270 Blast hits to 2031 proteins in 783 species: Archae - 0; Bacteria - 1438; Metazoa - 213; Fungi - 241; Plants - 48; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (gnl|cdd|36407 : 139.0) no description available & (gnl|cdd|67967 : 111.0) no description available & (reliability: 304.0) & (original description: Putative ate1, Description = Arginyl-tRNA--protein transferase 1, PFAM = PF04376)' T '29.1.20' 'protein.aa activation.phenylalanine-tRNA ligase' 'nbv0.5scaffold1620_122679-137258' '(at4g39280 : 805.0) phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative; FUNCTIONS IN: phenylalanine-tRNA ligase activity, tRNA binding, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: phenylalanyl-tRNA aminoacylation, tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit (InterPro:IPR004529), Phenylalanyl-tRNA synthetase alpha chain (InterPro:IPR002319), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: phenylalanyl-tRNA synthetase class IIc family protein (TAIR:AT3G58140.1). & (gnl|cdd|37995 : 687.0) no description available & (gnl|cdd|81306 : 419.0) no description available & (reliability: 1610.0) & (original description: Putative frs2, Description = Phenylalanyl-tRNA synthetase alpha chain, PFAM = PF01409)' T '29.1.20' 'protein.aa activation.phenylalanine-tRNA ligase' 'niben044scf00019626ctg002_8246-17504' '(at1g72550 : 347.0) tRNA synthetase beta subunit family protein; FUNCTIONS IN: RNA binding, phenylalanine-tRNA ligase activity, magnesium ion binding, nucleotide binding, ATP binding; INVOLVED IN: phenylalanyl-tRNA aminoacylation, translation; LOCATED IN: phenylalanine-tRNA ligase complex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Putative DNA binding domain (InterPro:IPR009061), tRNA synthetase, B5 (InterPro:IPR005147), Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic (InterPro:IPR004531), B3/B4 tRNA-binding domain (InterPro:IPR005146); Has 5993 Blast hits to 5980 proteins in 2451 species: Archae - 257; Bacteria - 4083; Metazoa - 257; Fungi - 153; Plants - 58; Viruses - 0; Other Eukaryotes - 1185 (source: NCBI BLink). & (gnl|cdd|37683 : 311.0) no description available & (gnl|cdd|83112 : 201.0) no description available & (reliability: 694.0) & (original description: Putative frs1, Description = Phenylalanyl-tRNA synthetase beta chain, PFAM = PF01409;PF03484)' T '29.1.20' 'protein.aa activation.phenylalanine-tRNA ligase' 'niben044scf00019626ctg006_358-8134' '(at1g72550 : 503.0) tRNA synthetase beta subunit family protein; FUNCTIONS IN: RNA binding, phenylalanine-tRNA ligase activity, magnesium ion binding, nucleotide binding, ATP binding; INVOLVED IN: phenylalanyl-tRNA aminoacylation, translation; LOCATED IN: phenylalanine-tRNA ligase complex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Putative DNA binding domain (InterPro:IPR009061), tRNA synthetase, B5 (InterPro:IPR005147), Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic (InterPro:IPR004531), B3/B4 tRNA-binding domain (InterPro:IPR005146); Has 5993 Blast hits to 5980 proteins in 2451 species: Archae - 257; Bacteria - 4083; Metazoa - 257; Fungi - 153; Plants - 58; Viruses - 0; Other Eukaryotes - 1185 (source: NCBI BLink). & (gnl|cdd|37683 : 435.0) no description available & (gnl|cdd|83112 : 222.0) no description available & (reliability: 1006.0) & (original description: Putative SYFB, Description = Putative phenylalanine--tRNA ligase beta subunit, PFAM = PF03483)' T '29.1.20' 'protein.aa activation.phenylalanine-tRNA ligase' 'niben101scf01075_359186-370682' '(at4g39280 : 803.0) phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative; FUNCTIONS IN: phenylalanine-tRNA ligase activity, tRNA binding, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: phenylalanyl-tRNA aminoacylation, tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit (InterPro:IPR004529), Phenylalanyl-tRNA synthetase alpha chain (InterPro:IPR002319), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: phenylalanyl-tRNA synthetase class IIc family protein (TAIR:AT3G58140.1). & (gnl|cdd|37995 : 688.0) no description available & (gnl|cdd|81306 : 422.0) no description available & (reliability: 1606.0) & (original description: Putative frs2, Description = Phenylalanyl-tRNA synthetase alpha chain, PFAM = PF01409)' T '29.1.20' 'protein.aa activation.phenylalanine-tRNA ligase' 'niben101scf03196_31528-55413' '(at1g72550 : 838.0) tRNA synthetase beta subunit family protein; FUNCTIONS IN: RNA binding, phenylalanine-tRNA ligase activity, magnesium ion binding, nucleotide binding, ATP binding; INVOLVED IN: phenylalanyl-tRNA aminoacylation, translation; LOCATED IN: phenylalanine-tRNA ligase complex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Putative DNA binding domain (InterPro:IPR009061), tRNA synthetase, B5 (InterPro:IPR005147), Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic (InterPro:IPR004531), B3/B4 tRNA-binding domain (InterPro:IPR005146); Has 5993 Blast hits to 5980 proteins in 2451 species: Archae - 257; Bacteria - 4083; Metazoa - 257; Fungi - 153; Plants - 58; Viruses - 0; Other Eukaryotes - 1185 (source: NCBI BLink). & (gnl|cdd|37683 : 737.0) no description available & (gnl|cdd|83112 : 417.0) no description available & (reliability: 1676.0) & (original description: Putative pheS, Description = Phenylalanyl-tRNA synthetase beta chain, PFAM = PF03484;PF03483;PF01409)' T '29.1.20' 'protein.aa activation.phenylalanine-tRNA ligase' 'niben101scf04375_586745-596426' '(at3g58140 : 666.0) phenylalanyl-tRNA synthetase class IIc family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: tRNA processing, phenylalanyl-tRNA aminoacylation, translation, tRNA aminoacylation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanyl-tRNA synthetase, class IIc, mitochondrial (InterPro:IPR004530), Phenylalanyl-tRNA synthetase, beta subunit, ferrodoxin-fold anticodon-binding (InterPro:IPR005121), Phenylalanyl-tRNA synthetase alpha chain (InterPro:IPR002319), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative (TAIR:AT4G39280.1); Has 12112 Blast hits to 12078 proteins in 3125 species: Archae - 246; Bacteria - 7816; Metazoa - 323; Fungi - 290; Plants - 111; Viruses - 0; Other Eukaryotes - 3326 (source: NCBI BLink). & (gnl|cdd|37994 : 531.0) no description available & (gnl|cdd|29807 : 248.0) no description available & (reliability: 1332.0) & (original description: Putative fars2, Description = Phenylalanyl-tRNA synthetase, PFAM = PF01409;PF03147)' T '29.1.20' 'protein.aa activation.phenylalanine-tRNA ligase' 'niben101scf12360_1-13361' '(at3g58140 : 385.0) phenylalanyl-tRNA synthetase class IIc family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: tRNA processing, phenylalanyl-tRNA aminoacylation, translation, tRNA aminoacylation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanyl-tRNA synthetase, class IIc, mitochondrial (InterPro:IPR004530), Phenylalanyl-tRNA synthetase, beta subunit, ferrodoxin-fold anticodon-binding (InterPro:IPR005121), Phenylalanyl-tRNA synthetase alpha chain (InterPro:IPR002319), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative (TAIR:AT4G39280.1); Has 12112 Blast hits to 12078 proteins in 3125 species: Archae - 246; Bacteria - 7816; Metazoa - 323; Fungi - 290; Plants - 111; Viruses - 0; Other Eukaryotes - 3326 (source: NCBI BLink). & (gnl|cdd|37994 : 289.0) no description available & (gnl|cdd|29807 : 169.0) no description available & (reliability: 770.0) & (original description: Putative fars2, Description = Phenylalanine--tRNA ligase, mitochondrial, PFAM = PF01409)' T '29.1.21' 'protein.aa activation.histidine-tRNA ligase' 'nbv0.3scaffold60323_140-11830' '(at3g46100 : 318.0) histidyl-tRNA synthetase; Histidyl-tRNA synthetase 1 (HRS1); FUNCTIONS IN: histidine-tRNA ligase activity; INVOLVED IN: histidyl-tRNA aminoacylation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidyl-tRNA synthetase, class IIa, subgroup (InterPro:IPR015807), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Anticodon-binding (InterPro:IPR004154), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Histidyl-tRNA synthetase, class IIa (InterPro:IPR004516); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G03406.1); Has 12183 Blast hits to 12140 proteins in 2982 species: Archae - 258; Bacteria - 7725; Metazoa - 293; Fungi - 147; Plants - 90; Viruses - 0; Other Eukaryotes - 3670 (source: NCBI BLink). & (gnl|cdd|37147 : 222.0) no description available & (gnl|cdd|30473 : 182.0) no description available & (reliability: 636.0) & (original description: Putative hisS, Description = Histidyl-tRNA synthetase, PFAM = PF13393)' T '29.1.21' 'protein.aa activation.histidine-tRNA ligase' 'nbv0.5scaffold2909_61648-88314' '(at3g46100 : 627.0) histidyl-tRNA synthetase; Histidyl-tRNA synthetase 1 (HRS1); FUNCTIONS IN: histidine-tRNA ligase activity; INVOLVED IN: histidyl-tRNA aminoacylation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidyl-tRNA synthetase, class IIa, subgroup (InterPro:IPR015807), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Anticodon-binding (InterPro:IPR004154), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Histidyl-tRNA synthetase, class IIa (InterPro:IPR004516); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G03406.1); Has 12183 Blast hits to 12140 proteins in 2982 species: Archae - 258; Bacteria - 7725; Metazoa - 293; Fungi - 147; Plants - 90; Viruses - 0; Other Eukaryotes - 3670 (source: NCBI BLink). & (gnl|cdd|37147 : 388.0) no description available & (gnl|cdd|30473 : 309.0) no description available & (p93422|syh_orysa : 121.0) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA ligase) (HisRS) - Oryza sativa (Rice) & (reliability: 1254.0) & (original description: Putative hisS, Description = Histidyl-tRNA synthetase, PFAM = PF03129;PF13393)' T '29.1.21' 'protein.aa activation.histidine-tRNA ligase' 'niben044scf00015472ctg010_1-3442' '(at3g46100 : 197.0) histidyl-tRNA synthetase; Histidyl-tRNA synthetase 1 (HRS1); FUNCTIONS IN: histidine-tRNA ligase activity; INVOLVED IN: histidyl-tRNA aminoacylation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidyl-tRNA synthetase, class IIa, subgroup (InterPro:IPR015807), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Anticodon-binding (InterPro:IPR004154), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Histidyl-tRNA synthetase, class IIa (InterPro:IPR004516); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G03406.1); Has 12183 Blast hits to 12140 proteins in 2982 species: Archae - 258; Bacteria - 7725; Metazoa - 293; Fungi - 147; Plants - 90; Viruses - 0; Other Eukaryotes - 3670 (source: NCBI BLink). & (gnl|cdd|37147 : 122.0) no description available & (gnl|cdd|73226 : 98.7) no description available & (reliability: 394.0) & (original description: Putative hisS, Description = Histidyl-tRNA synthetase, PFAM = PF13393)' T '29.1.21' 'protein.aa activation.histidine-tRNA ligase' 'niben101scf07591_154718-188891' '(at3g46100 : 669.0) histidyl-tRNA synthetase; Histidyl-tRNA synthetase 1 (HRS1); FUNCTIONS IN: histidine-tRNA ligase activity; INVOLVED IN: histidyl-tRNA aminoacylation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidyl-tRNA synthetase, class IIa, subgroup (InterPro:IPR015807), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Anticodon-binding (InterPro:IPR004154), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Histidyl-tRNA synthetase, class IIa (InterPro:IPR004516); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G03406.1); Has 12183 Blast hits to 12140 proteins in 2982 species: Archae - 258; Bacteria - 7725; Metazoa - 293; Fungi - 147; Plants - 90; Viruses - 0; Other Eukaryotes - 3670 (source: NCBI BLink). & (gnl|cdd|37147 : 414.0) no description available & (gnl|cdd|30473 : 335.0) no description available & (p93422|syh_orysa : 123.0) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA ligase) (HisRS) - Oryza sativa (Rice) & (reliability: 1338.0) & (original description: Putative hisS, Description = Histidyl-tRNA synthetase, PFAM = PF13393;PF03129)' T '29.1.21' 'protein.aa activation.histidine-tRNA ligase' 'niben101scf09172_91459-106559' '(at3g02760 : 787.0) Class II aaRS and biotin synthetases superfamily protein; FUNCTIONS IN: histidine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: histidyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidyl-tRNA synthetase, class IIa, subgroup (InterPro:IPR015807), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Anticodon-binding (InterPro:IPR004154), Histidyl-tRNA synthetase, class IIa (InterPro:IPR004516), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Histidyl-tRNA synthetase 1 (TAIR:AT3G46100.1); Has 12532 Blast hits to 12512 proteins in 2976 species: Archae - 257; Bacteria - 7359; Metazoa - 371; Fungi - 267; Plants - 113; Viruses - 0; Other Eukaryotes - 4165 (source: NCBI BLink). & (p93422|syh_orysa : 712.0) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA ligase) (HisRS) - Oryza sativa (Rice) & (gnl|cdd|37147 : 569.0) no description available & (gnl|cdd|30473 : 350.0) no description available & (reliability: 1574.0) & (original description: Putative hars, Description = Histidine--tRNA ligase, cytoplasmic, PFAM = PF03129;PF00221;PF13393)' T '29.1.21' 'protein.aa activation.histidine-tRNA ligase' 'niben101scf11491_314329-345198' '(at3g46100 : 613.0) histidyl-tRNA synthetase; Histidyl-tRNA synthetase 1 (HRS1); FUNCTIONS IN: histidine-tRNA ligase activity; INVOLVED IN: histidyl-tRNA aminoacylation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidyl-tRNA synthetase, class IIa, subgroup (InterPro:IPR015807), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Anticodon-binding (InterPro:IPR004154), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Histidyl-tRNA synthetase, class IIa (InterPro:IPR004516); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G03406.1); Has 12183 Blast hits to 12140 proteins in 2982 species: Archae - 258; Bacteria - 7725; Metazoa - 293; Fungi - 147; Plants - 90; Viruses - 0; Other Eukaryotes - 3670 (source: NCBI BLink). & (gnl|cdd|37147 : 372.0) no description available & (gnl|cdd|80464 : 318.0) no description available & (p93422|syh_orysa : 96.7) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA ligase) (HisRS) - Oryza sativa (Rice) & (reliability: 1226.0) & (original description: Putative ATHRS1, Description = Histidyl-tRNA synthetase 1, PFAM = PF13393;PF03129)' T '29.1.21' 'protein.aa activation.histidine-tRNA ligase' 'niben101scf18348_97273-106395' '(at3g02760 : 800.0) Class II aaRS and biotin synthetases superfamily protein; FUNCTIONS IN: histidine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: histidyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidyl-tRNA synthetase, class IIa, subgroup (InterPro:IPR015807), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Anticodon-binding (InterPro:IPR004154), Histidyl-tRNA synthetase, class IIa (InterPro:IPR004516), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Histidyl-tRNA synthetase 1 (TAIR:AT3G46100.1); Has 12532 Blast hits to 12512 proteins in 2976 species: Archae - 257; Bacteria - 7359; Metazoa - 371; Fungi - 267; Plants - 113; Viruses - 0; Other Eukaryotes - 4165 (source: NCBI BLink). & (p93422|syh_orysa : 714.0) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA ligase) (HisRS) - Oryza sativa (Rice) & (gnl|cdd|37147 : 569.0) no description available & (gnl|cdd|30473 : 351.0) no description available & (reliability: 1600.0) & (original description: Putative hisS, Description = Histidine--tRNA ligase, cytoplasmic, PFAM = PF00221;PF03129;PF13393)' T '29.1.22' 'protein.aa activation.asparagine-tRNA ligase' 'nbv0.3scaffold10026_19389-29088' '(at4g17300 : 863.0) Asparaginyl-tRNA synthetase protein involved in amino acid activation/protein synthesis.; NS1; FUNCTIONS IN: asparagine-tRNA ligase activity; INVOLVED IN: asparaginyl-tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR004522), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT1G70980.1); Has 19374 Blast hits to 17086 proteins in 2835 species: Archae - 447; Bacteria - 14373; Metazoa - 505; Fungi - 670; Plants - 294; Viruses - 0; Other Eukaryotes - 3085 (source: NCBI BLink). & (gnl|cdd|81233 : 730.0) no description available & (gnl|cdd|35774 : 618.0) no description available & (reliability: 1726.0) & (original description: Putative asnS, Description = Asparagine--tRNA ligase, PFAM = PF01336;PF00152)' T '29.1.22' 'protein.aa activation.asparagine-tRNA ligase' 'niben044scf00001260ctg000_1-5483' '(at5g56680 : 800.0) Encodes a putative cytosolic asparaginyl-tRNA synthetase.; SYNC1; FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cadmium ion, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: cotyledon, guard cell, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR004522), WHEP-TRS (InterPro:IPR000738), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT1G70980.1); Has 19343 Blast hits to 13725 proteins in 2674 species: Archae - 682; Bacteria - 14860; Metazoa - 615; Fungi - 765; Plants - 223; Viruses - 0; Other Eukaryotes - 2198 (source: NCBI BLink). & (gnl|cdd|81233 : 483.0) no description available & (gnl|cdd|35774 : 422.0) no description available & (reliability: 1600.0) & (original description: Putative SYNC1, Description = Asparagine--tRNA ligase, cytoplasmic 1, PFAM = PF00152;PF00152;PF01336)' T '29.1.22' 'protein.aa activation.asparagine-tRNA ligase' 'niben101scf02275_408477-422060' '(at5g56680 : 796.0) Encodes a putative cytosolic asparaginyl-tRNA synthetase.; SYNC1; FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cadmium ion, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: cotyledon, guard cell, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR004522), WHEP-TRS (InterPro:IPR000738), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT1G70980.1); Has 19343 Blast hits to 13725 proteins in 2674 species: Archae - 682; Bacteria - 14860; Metazoa - 615; Fungi - 765; Plants - 223; Viruses - 0; Other Eukaryotes - 2198 (source: NCBI BLink). & (gnl|cdd|81233 : 476.0) no description available & (gnl|cdd|35774 : 417.0) no description available & (reliability: 1592.0) & (original description: Putative SYNC3, Description = Asparagine--tRNA ligase, cytoplasmic 3, PFAM = PF01336;PF00152;PF00152)' T '29.1.22' 'protein.aa activation.asparagine-tRNA ligase' 'niben101scf02979_338042-344212' '(at5g56680 : 825.0) Encodes a putative cytosolic asparaginyl-tRNA synthetase.; SYNC1; FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cadmium ion, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: cotyledon, guard cell, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR004522), WHEP-TRS (InterPro:IPR000738), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT1G70980.1); Has 19343 Blast hits to 13725 proteins in 2674 species: Archae - 682; Bacteria - 14860; Metazoa - 615; Fungi - 765; Plants - 223; Viruses - 0; Other Eukaryotes - 2198 (source: NCBI BLink). & (gnl|cdd|81233 : 493.0) no description available & (gnl|cdd|35774 : 422.0) no description available & (reliability: 1650.0) & (original description: Putative SYNC1, Description = Asparagine--tRNA ligase, cytoplasmic 1, PFAM = PF00152;PF00152;PF01336)' T '29.1.22' 'protein.aa activation.asparagine-tRNA ligase' 'niben101scf06825_52911-69262' '(at4g17300 : 873.0) Asparaginyl-tRNA synthetase protein involved in amino acid activation/protein synthesis.; NS1; FUNCTIONS IN: asparagine-tRNA ligase activity; INVOLVED IN: asparaginyl-tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR004522), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT1G70980.1); Has 19374 Blast hits to 17086 proteins in 2835 species: Archae - 447; Bacteria - 14373; Metazoa - 505; Fungi - 670; Plants - 294; Viruses - 0; Other Eukaryotes - 3085 (source: NCBI BLink). & (gnl|cdd|81233 : 726.0) no description available & (gnl|cdd|35774 : 619.0) no description available & (reliability: 1746.0) & (original description: Putative SYNO, Description = Asparagine--tRNA ligase, chloroplastic/mitochondrial, PFAM = PF00152;PF01336)' T '29.1.22' 'protein.aa activation.asparagine-tRNA ligase' 'niben101scf12789_125933-130712' '(at3g07420 : 620.0) Encodes an asparaginyl-tRNA synthetase.; asparaginyl-tRNA synthetase 2 (NS2); CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT5G56680.1); Has 9059 Blast hits to 7126 proteins in 1951 species: Archae - 376; Bacteria - 6198; Metazoa - 478; Fungi - 585; Plants - 210; Viruses - 0; Other Eukaryotes - 1212 (source: NCBI BLink). & (gnl|cdd|81233 : 352.0) no description available & (gnl|cdd|35774 : 308.0) no description available & (reliability: 1240.0) & (original description: Putative SYNC2, Description = Asparagine--tRNA ligase, cytoplasmic 2, PFAM = PF00152;PF00152)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'nbv0.3scaffold7255_39028-46479' '(at1g76050 : 491.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: shoot, leaf lamina base, stem, embryo, leaf whorl; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, RluC/RluD (InterPro:IPR006225), Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224), RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G19440.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30910 : 251.0) no description available & (gnl|cdd|37130 : 185.0) no description available & (reliability: 982.0) & (original description: Putative pus3, Description = Pseudouridine synthase, PFAM = PF00849;PF01479)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'nbv0.3scaffold7695_34375-42513' '(at1g09800 : 418.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase I, TruA, N-terminal (InterPro:IPR020094), Pseudouridine synthase I, TruA, alpha/beta domain (InterPro:IPR020097), Pseudouridine synthase I, TruA, C-terminal (InterPro:IPR020095), Pseudouridine synthase I, TruA (InterPro:IPR001406); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G06950.1); Has 10187 Blast hits to 8452 proteins in 2593 species: Archae - 98; Bacteria - 6891; Metazoa - 134; Fungi - 4; Plants - 112; Viruses - 0; Other Eukaryotes - 2948 (source: NCBI BLink). & (gnl|cdd|30020 : 209.0) no description available & (gnl|cdd|39594 : 186.0) no description available & (reliability: 836.0) & (original description: Putative truA, Description = tRNA pseudouridine synthase, PFAM = PF01416;PF01416)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'nbv0.3scaffold8223_41689-53891' '(at5g35400 : 194.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase I, TruA, N-terminal (InterPro:IPR020094), Pseudouridine synthase I, TruA, alpha/beta domain (InterPro:IPR020097), Pseudouridine synthase I, TruA, C-terminal (InterPro:IPR020095), Pseudouridine synthase I, TruA (InterPro:IPR001406); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT1G20370.1). & (reliability: 388.0) & (original description: Putative PGSC0003DMG402009562, Description = tRNA pseudouridine synthase, PFAM = )' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'nbv0.3scaffold12908_41484-43553' '(at3g52260 : 105.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity, RNA binding; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT5G51140.1). & (reliability: 210.0) & (original description: Putative At3g52260, Description = RNA pseudourine synthase 5, PFAM = )' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'nbv0.3scaffold31198_2733-10443' '(at2g39140 : 249.0) Suppressor of var2 variegation phenotype. Chloroplast localized. Loss of function mutant has defects in chloroplast protein translation and rRNA processing. Similar in sequence to pseudouridine synthase proteins.; SUPPRESSOR OF VARIEGATION 1 (SVR1); CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), RNA-binding S4 (InterPro:IPR002942), Pseudouridine synthase, RsuA and RluB/E/F, conserved site (InterPro:IPR018496); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G43340.1); Has 12713 Blast hits to 12709 proteins in 2415 species: Archae - 0; Bacteria - 10639; Metazoa - 2; Fungi - 2; Plants - 70; Viruses - 0; Other Eukaryotes - 2000 (source: NCBI BLink). & (gnl|cdd|31380 : 124.0) no description available & (reliability: 498.0) & (original description: Putative rluB, Description = Pseudouridine synthase, PFAM = PF00849)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'nbv0.3scaffold39836_2052-10102' '(at2g39140 : 464.0) Suppressor of var2 variegation phenotype. Chloroplast localized. Loss of function mutant has defects in chloroplast protein translation and rRNA processing. Similar in sequence to pseudouridine synthase proteins.; SUPPRESSOR OF VARIEGATION 1 (SVR1); CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), RNA-binding S4 (InterPro:IPR002942), Pseudouridine synthase, RsuA and RluB/E/F, conserved site (InterPro:IPR018496); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G43340.1); Has 12713 Blast hits to 12709 proteins in 2415 species: Archae - 0; Bacteria - 10639; Metazoa - 2; Fungi - 2; Plants - 70; Viruses - 0; Other Eukaryotes - 2000 (source: NCBI BLink). & (gnl|cdd|31380 : 220.0) no description available & (reliability: 928.0) & (original description: Putative yjbC, Description = Pseudouridine synthase, PFAM = PF00849;PF01479)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'nbv0.3scaffold80010_774-4263' '(at1g20370 : 551.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase I, TruA, N-terminal (InterPro:IPR020094), Pseudouridine synthase I, TruA, alpha/beta domain (InterPro:IPR020097), Pseudouridine synthase I, TruA, C-terminal (InterPro:IPR020095), Pseudouridine synthase I, TruA (InterPro:IPR001406); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT1G76120.1); Has 3883 Blast hits to 3550 proteins in 1359 species: Archae - 140; Bacteria - 2302; Metazoa - 346; Fungi - 312; Plants - 197; Viruses - 0; Other Eukaryotes - 586 (source: NCBI BLink). & (gnl|cdd|37764 : 244.0) no description available & (gnl|cdd|73314 : 181.0) no description available & (reliability: 1102.0) & (original description: Putative Os02g0668400, Description = Os02g0668400 protein, PFAM = PF01416)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'nbv0.5scaffold1177_242661-260392' '(at3g52260 : 464.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity, RNA binding; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT5G51140.1). & (gnl|cdd|30910 : 181.0) no description available & (gnl|cdd|37130 : 101.0) no description available & (reliability: 928.0) & (original description: Putative pus6, Description = Pseudouridine synthase, PFAM = PF00849)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'nbv0.5scaffold2655_132312-140141' '(at3g19440 : 439.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT1G78910.1); Has 18366 Blast hits to 18356 proteins in 2657 species: Archae - 12; Bacteria - 13665; Metazoa - 270; Fungi - 217; Plants - 245; Viruses - 0; Other Eukaryotes - 3957 (source: NCBI BLink). & (gnl|cdd|30910 : 161.0) no description available & (gnl|cdd|37130 : 155.0) no description available & (reliability: 878.0) & (original description: Putative At3g19440, Description = RNA pseudouridine synthase 4, mitochondrial, PFAM = PF00849)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'nbv0.5scaffold4314_33829-44773' '(at3g52260 : 435.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity, RNA binding; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT5G51140.1). & (gnl|cdd|30910 : 163.0) no description available & (gnl|cdd|37130 : 85.4) no description available & (reliability: 870.0) & (original description: Putative pus6, Description = Pseudouridine synthase, PFAM = PF00849)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben044scf00012829ctg004_19824-35097' '(at1g34150 : 459.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase I, TruA, N-terminal (InterPro:IPR020094), Pseudouridine synthase I, TruA, alpha/beta domain (InterPro:IPR020097), Pseudouridine synthase I, TruA, C-terminal (InterPro:IPR020095), Pseudouridine synthase I, TruA (InterPro:IPR001406); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G06950.1); Has 7569 Blast hits to 7566 proteins in 2644 species: Archae - 155; Bacteria - 5313; Metazoa - 277; Fungi - 265; Plants - 164; Viruses - 0; Other Eukaryotes - 1395 (source: NCBI BLink). & (gnl|cdd|30019 : 362.0) no description available & (gnl|cdd|37765 : 294.0) no description available & (reliability: 918.0) & (original description: Putative pus3, Description = tRNA pseudouridine synthase, PFAM = PF01416)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben044scf00025466ctg000_15356-34897' '(at3g52260 : 418.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity, RNA binding; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT5G51140.1). & (gnl|cdd|30910 : 174.0) no description available & (gnl|cdd|37130 : 84.7) no description available & (reliability: 836.0) & (original description: Putative pus6, Description = Pseudouridine synthase, PFAM = PF00849)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben044scf00033146ctg002_6417-12918' '(at3g19440 : 308.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT1G78910.1); Has 18366 Blast hits to 18356 proteins in 2657 species: Archae - 12; Bacteria - 13665; Metazoa - 270; Fungi - 217; Plants - 245; Viruses - 0; Other Eukaryotes - 3957 (source: NCBI BLink). & (gnl|cdd|30910 : 113.0) no description available & (gnl|cdd|37130 : 96.6) no description available & (reliability: 616.0) & (original description: Putative PGSC0003DMG400025766, Description = RNA pseudouridylate synthase 4, PFAM = PF00849)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben044scf00033146ctg003_1-1907' '(at3g19440 : 143.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT1G78910.1); Has 18366 Blast hits to 18356 proteins in 2657 species: Archae - 12; Bacteria - 13665; Metazoa - 270; Fungi - 217; Plants - 245; Viruses - 0; Other Eukaryotes - 3957 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative rluA, Description = Pseudouridine synthase, PFAM = )' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben044scf00050083ctg001_5253-13315' '(at5g14460 : 590.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity, transporter activity; INVOLVED IN: pseudouridine synthesis, RNA modification, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase II, TruB, N-terminal, bacterial-type (InterPro:IPR014780), Pseudouridine synthase II, TruB, N-terminal (InterPro:IPR002501); BEST Arabidopsis thaliana protein match is: homologue of NAP57 (TAIR:AT3G57150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30022 : 284.0) no description available & (gnl|cdd|37740 : 152.0) no description available & (reliability: 1180.0) & (original description: Putative truB, Description = tRNA pseudouridine synthase B, PFAM = PF01509;PF16198)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben044scf00051597ctg002_163-6964' '(at1g76050 : 372.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: shoot, leaf lamina base, stem, embryo, leaf whorl; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, RluC/RluD (InterPro:IPR006225), Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224), RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G19440.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30910 : 197.0) no description available & (gnl|cdd|37130 : 138.0) no description available & (reliability: 744.0) & (original description: Putative pus3, Description = Pseudouridine synthase, PFAM = PF01479;PF00849)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben044scf00056299ctg005_260-2943' '(at1g56345 : 287.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224); Has 16985 Blast hits to 16836 proteins in 2654 species: Archae - 12; Bacteria - 12887; Metazoa - 225; Fungi - 200; Plants - 183; Viruses - 0; Other Eukaryotes - 3478 (source: NCBI BLink). & (gnl|cdd|30910 : 123.0) no description available & (gnl|cdd|37130 : 109.0) no description available & (reliability: 574.0) & (original description: Putative glysoja_012041, Description = RNA pseudourine synthase 1, PFAM = PF00849)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf00046_442824-451482' '(at5g14460 : 582.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity, transporter activity; INVOLVED IN: pseudouridine synthesis, RNA modification, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase II, TruB, N-terminal, bacterial-type (InterPro:IPR014780), Pseudouridine synthase II, TruB, N-terminal (InterPro:IPR002501); BEST Arabidopsis thaliana protein match is: homologue of NAP57 (TAIR:AT3G57150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30022 : 285.0) no description available & (gnl|cdd|37740 : 157.0) no description available & (reliability: 1164.0) & (original description: Putative truB, Description = tRNA pseudouridine synthase B, PFAM = PF16198;PF01509)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf00332_631698-636973' '(at1g56345 : 353.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224); Has 16985 Blast hits to 16836 proteins in 2654 species: Archae - 12; Bacteria - 12887; Metazoa - 225; Fungi - 200; Plants - 183; Viruses - 0; Other Eukaryotes - 3478 (source: NCBI BLink). & (gnl|cdd|30910 : 152.0) no description available & (gnl|cdd|37130 : 122.0) no description available & (reliability: 706.0) & (original description: Putative BnaCnng48160D, Description = BnaCnng48160D protein, PFAM = PF00849)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf00332_632088-636974' '(at1g56345 : 181.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224); Has 16985 Blast hits to 16836 proteins in 2654 species: Archae - 12; Bacteria - 12887; Metazoa - 225; Fungi - 200; Plants - 183; Viruses - 0; Other Eukaryotes - 3478 (source: NCBI BLink). & (gnl|cdd|30910 : 81.2) no description available & (reliability: 362.0) & (original description: Putative At1g56345, Description = RNA pseudouridine synthase 1, PFAM = PF00849)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf00539_580146-588097' '(at1g76050 : 484.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: shoot, leaf lamina base, stem, embryo, leaf whorl; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, RluC/RluD (InterPro:IPR006225), Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224), RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G19440.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30910 : 244.0) no description available & (gnl|cdd|37130 : 177.0) no description available & (reliability: 968.0) & (original description: Putative pus3, Description = Pseudouridine synthase, PFAM = PF00849;PF01479)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf01671_605771-611953' '(at3g06950 : 418.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase I, TruA, N-terminal (InterPro:IPR020094), Pseudouridine synthase I, TruA, alpha/beta domain (InterPro:IPR020097), Pseudouridine synthase I, TruA, C-terminal (InterPro:IPR020095), Pseudouridine synthase I, TruA (InterPro:IPR001406); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT1G34150.1); Has 9137 Blast hits to 9127 proteins in 2768 species: Archae - 169; Bacteria - 5633; Metazoa - 320; Fungi - 238; Plants - 169; Viruses - 0; Other Eukaryotes - 2608 (source: NCBI BLink). & (gnl|cdd|30020 : 278.0) no description available & (gnl|cdd|39594 : 247.0) no description available & (reliability: 836.0) & (original description: Putative truA, Description = tRNA pseudouridine synthase A, PFAM = PF01416;PF01416)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf01673_194948-228522' '(at5g35400 : 397.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase I, TruA, N-terminal (InterPro:IPR020094), Pseudouridine synthase I, TruA, alpha/beta domain (InterPro:IPR020097), Pseudouridine synthase I, TruA, C-terminal (InterPro:IPR020095), Pseudouridine synthase I, TruA (InterPro:IPR001406); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT1G20370.1). & (gnl|cdd|30020 : 146.0) no description available & (gnl|cdd|37764 : 81.1) no description available & (reliability: 794.0) & (original description: Putative At5g35400, Description = tRNA pseudouridine synthase, PFAM = PF01416)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf01711_222608-230880' '(at1g09800 : 461.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase I, TruA, N-terminal (InterPro:IPR020094), Pseudouridine synthase I, TruA, alpha/beta domain (InterPro:IPR020097), Pseudouridine synthase I, TruA, C-terminal (InterPro:IPR020095), Pseudouridine synthase I, TruA (InterPro:IPR001406); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G06950.1); Has 10187 Blast hits to 8452 proteins in 2593 species: Archae - 98; Bacteria - 6891; Metazoa - 134; Fungi - 4; Plants - 112; Viruses - 0; Other Eukaryotes - 2948 (source: NCBI BLink). & (gnl|cdd|30020 : 209.0) no description available & (gnl|cdd|39594 : 188.0) no description available & (reliability: 922.0) & (original description: Putative truA, Description = tRNA pseudouridine synthase, PFAM = PF01416;PF01416)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf01942_193981-204369' '(at1g34150 : 451.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase I, TruA, N-terminal (InterPro:IPR020094), Pseudouridine synthase I, TruA, alpha/beta domain (InterPro:IPR020097), Pseudouridine synthase I, TruA, C-terminal (InterPro:IPR020095), Pseudouridine synthase I, TruA (InterPro:IPR001406); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G06950.1); Has 7569 Blast hits to 7566 proteins in 2644 species: Archae - 155; Bacteria - 5313; Metazoa - 277; Fungi - 265; Plants - 164; Viruses - 0; Other Eukaryotes - 1395 (source: NCBI BLink). & (gnl|cdd|30019 : 358.0) no description available & (gnl|cdd|37765 : 289.0) no description available & (reliability: 902.0) & (original description: Putative pus3, Description = tRNA pseudouridine synthase, PFAM = PF01416)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf02719_119663-145668' '(at2g30320 : 469.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase I, TruA, N-terminal (InterPro:IPR020094), Pseudouridine synthase I, TruA, alpha/beta domain (InterPro:IPR020097), Pseudouridine synthase I, TruA (InterPro:IPR001406); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT1G76120.1); Has 2235 Blast hits to 2027 proteins in 681 species: Archae - 89; Bacteria - 873; Metazoa - 390; Fungi - 255; Plants - 163; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (gnl|cdd|37764 : 265.0) no description available & (gnl|cdd|73314 : 179.0) no description available & (reliability: 938.0) & (original description: Putative At2g30320, Description = Putative tRNA pseudouridine synthase, PFAM = PF01416)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf03503_11058-25093' '(at1g76050 : 485.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: shoot, leaf lamina base, stem, embryo, leaf whorl; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, RluC/RluD (InterPro:IPR006225), Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224), RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G19440.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30910 : 251.0) no description available & (gnl|cdd|37130 : 187.0) no description available & (reliability: 970.0) & (original description: Putative pus3, Description = Pseudouridine synthase, PFAM = PF01479;PF00849)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf05057_750334-766384' '(at1g34150 : 424.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase I, TruA, N-terminal (InterPro:IPR020094), Pseudouridine synthase I, TruA, alpha/beta domain (InterPro:IPR020097), Pseudouridine synthase I, TruA, C-terminal (InterPro:IPR020095), Pseudouridine synthase I, TruA (InterPro:IPR001406); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G06950.1); Has 7569 Blast hits to 7566 proteins in 2644 species: Archae - 155; Bacteria - 5313; Metazoa - 277; Fungi - 265; Plants - 164; Viruses - 0; Other Eukaryotes - 1395 (source: NCBI BLink). & (gnl|cdd|30019 : 362.0) no description available & (gnl|cdd|37765 : 295.0) no description available & (reliability: 848.0) & (original description: Putative pus3, Description = tRNA pseudouridine synthase, PFAM = PF01416)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf06837_209299-220126' '(at3g19440 : 145.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT1G78910.1); Has 18366 Blast hits to 18356 proteins in 2657 species: Archae - 12; Bacteria - 13665; Metazoa - 270; Fungi - 217; Plants - 245; Viruses - 0; Other Eukaryotes - 3957 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative rluC, Description = Ribosomal pseudouridine synthase, putative, PFAM = PF00849)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf07790_201473-209006' '(at4g21770 : 615.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145); Has 5935 Blast hits to 5933 proteins in 1806 species: Archae - 0; Bacteria - 4596; Metazoa - 112; Fungi - 68; Plants - 78; Viruses - 0; Other Eukaryotes - 1081 (source: NCBI BLink). & (gnl|cdd|37130 : 191.0) no description available & (gnl|cdd|30029 : 97.0) no description available & (reliability: 1230.0) & (original description: Putative At4g21770, Description = RNA pseudouridine synthase 6, chloroplastic, PFAM = PF00849)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf07939_155597-161349' '(at1g78910 : 622.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G19440.1); Has 16543 Blast hits to 16535 proteins in 2635 species: Archae - 10; Bacteria - 12720; Metazoa - 248; Fungi - 118; Plants - 203; Viruses - 0; Other Eukaryotes - 3244 (source: NCBI BLink). & (gnl|cdd|37130 : 184.0) no description available & (gnl|cdd|30910 : 137.0) no description available & (reliability: 1244.0) & (original description: Putative At1g78910, Description = RNA pseudouridine synthase 3, mitochondrial, PFAM = PF00849)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf08533_304540-345554' '(at3g52260 : 479.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity, RNA binding; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT5G51140.1). & (gnl|cdd|30910 : 188.0) no description available & (gnl|cdd|37130 : 102.0) no description available & (reliability: 958.0) & (original description: Putative pus6, Description = Pseudouridine synthase, PFAM = PF00849)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf08936_398048-409906' '(at5g51140 : 481.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, RluC/RluD (InterPro:IPR006225), Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224), RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G52260.2). & (gnl|cdd|37130 : 320.0) no description available & (gnl|cdd|73313 : 247.0) no description available & (reliability: 962.0) & (original description: Putative Os02g0512300, Description = RNA pseudouridine synthase 7, PFAM = PF00849)' T '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'niben101scf15442_13440-21941' '(at2g39140 : 433.0) Suppressor of var2 variegation phenotype. Chloroplast localized. Loss of function mutant has defects in chloroplast protein translation and rRNA processing. Similar in sequence to pseudouridine synthase proteins.; SUPPRESSOR OF VARIEGATION 1 (SVR1); CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), RNA-binding S4 (InterPro:IPR002942), Pseudouridine synthase, RsuA and RluB/E/F, conserved site (InterPro:IPR018496); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G43340.1); Has 12713 Blast hits to 12709 proteins in 2415 species: Archae - 0; Bacteria - 10639; Metazoa - 2; Fungi - 2; Plants - 70; Viruses - 0; Other Eukaryotes - 2000 (source: NCBI BLink). & (gnl|cdd|31380 : 187.0) no description available & (reliability: 866.0) & (original description: Putative yjbC, Description = Pseudouridine synthase, PFAM = PF00849;PF01479)' T '29.1.40' 'protein.aa activation.bifunctional aminoacyl-tRNA synthetase' 'nbv0.3scaffold20836_25057-32730' '(at3g62120 : 872.0) Class II aaRS and biotin synthetases superfamily protein; FUNCTIONS IN: proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: prolyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Prolyl-tRNA synthetase, class IIa, prokaryotic-type (InterPro:IPR004499), Prolyl-tRNA synthetase, class II, C-terminal (InterPro:IPR016061), Anticodon-binding (InterPro:IPR004154), Prolyl-tRNA synthetase, class II (InterPro:IPR017449), Prolyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR002316), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G52520.1); Has 9240 Blast hits to 8990 proteins in 2633 species: Archae - 270; Bacteria - 6522; Metazoa - 295; Fungi - 194; Plants - 105; Viruses - 0; Other Eukaryotes - 1854 (source: NCBI BLink). & (gnl|cdd|39365 : 809.0) no description available & (gnl|cdd|82724 : 592.0) no description available & (reliability: 1744.0) & (original description: Putative proS, Description = Prolyl-tRNA synthetase, PFAM = PF00587;PF03129;PF09180)' T '29.1.40' 'protein.aa activation.bifunctional aminoacyl-tRNA synthetase' 'nbv0.3scaffold30147_1542-10332' '(at3g62120 : 879.0) Class II aaRS and biotin synthetases superfamily protein; FUNCTIONS IN: proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: prolyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Prolyl-tRNA synthetase, class IIa, prokaryotic-type (InterPro:IPR004499), Prolyl-tRNA synthetase, class II, C-terminal (InterPro:IPR016061), Anticodon-binding (InterPro:IPR004154), Prolyl-tRNA synthetase, class II (InterPro:IPR017449), Prolyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR002316), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G52520.1); Has 9240 Blast hits to 8990 proteins in 2633 species: Archae - 270; Bacteria - 6522; Metazoa - 295; Fungi - 194; Plants - 105; Viruses - 0; Other Eukaryotes - 1854 (source: NCBI BLink). & (gnl|cdd|39365 : 808.0) no description available & (gnl|cdd|82724 : 599.0) no description available & (reliability: 1758.0) & (original description: Putative eprs, Description = Bifunctional glutamate/proline--tRNA ligase, PFAM = PF00587;PF03129;PF09180)' T '29.1.40' 'protein.aa activation.bifunctional aminoacyl-tRNA synthetase' 'nbv0.3scaffold60292_1-4362' '(at3g62120 : 171.0) Class II aaRS and biotin synthetases superfamily protein; FUNCTIONS IN: proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: prolyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Prolyl-tRNA synthetase, class IIa, prokaryotic-type (InterPro:IPR004499), Prolyl-tRNA synthetase, class II, C-terminal (InterPro:IPR016061), Anticodon-binding (InterPro:IPR004154), Prolyl-tRNA synthetase, class II (InterPro:IPR017449), Prolyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR002316), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G52520.1); Has 9240 Blast hits to 8990 proteins in 2633 species: Archae - 270; Bacteria - 6522; Metazoa - 295; Fungi - 194; Plants - 105; Viruses - 0; Other Eukaryotes - 1854 (source: NCBI BLink). & (gnl|cdd|39365 : 163.0) no description available & (gnl|cdd|29823 : 115.0) no description available & (reliability: 342.0) & (original description: Putative eprs, Description = Bifunctional glutamate/proline--tRNA ligase, PFAM = )' T '29.1.40' 'protein.aa activation.bifunctional aminoacyl-tRNA synthetase' 'nbv0.5scaffold3997_17733-21655' '(gnl|cdd|39365 : 163.0) no description available & (at3g62120 : 159.0) Class II aaRS and biotin synthetases superfamily protein; FUNCTIONS IN: proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: prolyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Prolyl-tRNA synthetase, class IIa, prokaryotic-type (InterPro:IPR004499), Prolyl-tRNA synthetase, class II, C-terminal (InterPro:IPR016061), Anticodon-binding (InterPro:IPR004154), Prolyl-tRNA synthetase, class II (InterPro:IPR017449), Prolyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR002316), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G52520.1); Has 9240 Blast hits to 8990 proteins in 2633 species: Archae - 270; Bacteria - 6522; Metazoa - 295; Fungi - 194; Plants - 105; Viruses - 0; Other Eukaryotes - 1854 (source: NCBI BLink). & (gnl|cdd|29823 : 116.0) no description available & (reliability: 318.0) & (original description: Putative eprs, Description = Bifunctional glutamate/proline--tRNA ligase, PFAM = )' T '29.1.40' 'protein.aa activation.bifunctional aminoacyl-tRNA synthetase' 'nbv0.5scaffold6760_13977-19134' '(at3g62120 : 337.0) Class II aaRS and biotin synthetases superfamily protein; FUNCTIONS IN: proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: prolyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Prolyl-tRNA synthetase, class IIa, prokaryotic-type (InterPro:IPR004499), Prolyl-tRNA synthetase, class II, C-terminal (InterPro:IPR016061), Anticodon-binding (InterPro:IPR004154), Prolyl-tRNA synthetase, class II (InterPro:IPR017449), Prolyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR002316), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G52520.1); Has 9240 Blast hits to 8990 proteins in 2633 species: Archae - 270; Bacteria - 6522; Metazoa - 295; Fungi - 194; Plants - 105; Viruses - 0; Other Eukaryotes - 1854 (source: NCBI BLink). & (gnl|cdd|39365 : 328.0) no description available & (gnl|cdd|29823 : 263.0) no description available & (reliability: 674.0) & (original description: Putative Eprs, Description = Bifunctional glutamate/proline--tRNA ligase, PFAM = PF00587)' T '29.1.40' 'protein.aa activation.bifunctional aminoacyl-tRNA synthetase' 'niben101scf17442_6135-13475' '(at5g52520 : 838.0) OVULE ABORTION 6 (OVA6); FUNCTIONS IN: proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: regulation of photosynthesis, embryo sac development, seed development, tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Prolyl-tRNA synthetase, class IIa, prokaryotic-type (InterPro:IPR004499), Prolyl-tRNA synthetase, class II, C-terminal (InterPro:IPR016061), Anticodon-binding (InterPro:IPR004154), Prolyl-tRNA synthetase, class II (InterPro:IPR017449), Prolyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR002316), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT3G62120.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|82724 : 697.0) no description available & (gnl|cdd|39365 : 670.0) no description available & (reliability: 1676.0) & (original description: Putative OVA6, Description = Proline--tRNA ligase, chloroplastic/mitochondrial, PFAM = PF03129;PF00587;PF09180)' T '29.2' 'protein.synthesis' 'nbv0.3scaffold61576_3558-7578' '(at1g64790 : 115.0) ILITYHIA (ILA) is a HEAT repeat protein involved in plant immunity. The gene is also involved in systemic acquired resistance induced by P. syringae expressing avrRps4. Loss-of-function mutants of ILA caused pleiotropic defects in the mutant plants. The mutant plants are smaller in size and the leaves are serrated and yellow to light green in color.; ILITYHIA (ILA); FUNCTIONS IN: binding; INVOLVED IN: systemic acquired resistance, defense response to bacterium; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024). & (reliability: 230.0) & (original description: Putative ILA, Description = Protein ILITYHIA, PFAM = )' T '29.2' 'protein.synthesis' 'nbv0.5scaffold1607_146728-154112' '(at1g64790 : 113.0) ILITYHIA (ILA) is a HEAT repeat protein involved in plant immunity. The gene is also involved in systemic acquired resistance induced by P. syringae expressing avrRps4. Loss-of-function mutants of ILA caused pleiotropic defects in the mutant plants. The mutant plants are smaller in size and the leaves are serrated and yellow to light green in color.; ILITYHIA (ILA); FUNCTIONS IN: binding; INVOLVED IN: systemic acquired resistance, defense response to bacterium; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024). & (reliability: 226.0) & (original description: Putative ILA, Description = Translational activator GCN1, PFAM = )' T '29.2' 'protein.synthesis' 'niben044scf00008510ctg030_1-3539' '(at1g64790 : 146.0) ILITYHIA (ILA) is a HEAT repeat protein involved in plant immunity. The gene is also involved in systemic acquired resistance induced by P. syringae expressing avrRps4. Loss-of-function mutants of ILA caused pleiotropic defects in the mutant plants. The mutant plants are smaller in size and the leaves are serrated and yellow to light green in color.; ILITYHIA (ILA); FUNCTIONS IN: binding; INVOLVED IN: systemic acquired resistance, defense response to bacterium; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024). & (reliability: 292.0) & (original description: Putative ILA, Description = Protein ILITYHIA, PFAM = )' T '29.2' 'protein.synthesis' 'niben044scf00014161ctg000_1-7686' '(at1g64790 : 679.0) ILITYHIA (ILA) is a HEAT repeat protein involved in plant immunity. The gene is also involved in systemic acquired resistance induced by P. syringae expressing avrRps4. Loss-of-function mutants of ILA caused pleiotropic defects in the mutant plants. The mutant plants are smaller in size and the leaves are serrated and yellow to light green in color.; ILITYHIA (ILA); FUNCTIONS IN: binding; INVOLVED IN: systemic acquired resistance, defense response to bacterium; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024). & (reliability: 1358.0) & (original description: Putative ILA, Description = Translational activator GCN1, PFAM = )' T '29.2' 'protein.synthesis' 'niben101scf00420_109795-113820' '(at1g64790 : 199.0) ILITYHIA (ILA) is a HEAT repeat protein involved in plant immunity. The gene is also involved in systemic acquired resistance induced by P. syringae expressing avrRps4. Loss-of-function mutants of ILA caused pleiotropic defects in the mutant plants. The mutant plants are smaller in size and the leaves are serrated and yellow to light green in color.; ILITYHIA (ILA); FUNCTIONS IN: binding; INVOLVED IN: systemic acquired resistance, defense response to bacterium; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024). & (reliability: 398.0) & (original description: Putative ILA, Description = Protein ILITYHIA, PFAM = )' T '29.2' 'protein.synthesis' 'niben101scf04707_26323-80843' '(at1g64790 : 3431.0) ILITYHIA (ILA) is a HEAT repeat protein involved in plant immunity. The gene is also involved in systemic acquired resistance induced by P. syringae expressing avrRps4. Loss-of-function mutants of ILA caused pleiotropic defects in the mutant plants. The mutant plants are smaller in size and the leaves are serrated and yellow to light green in color.; ILITYHIA (ILA); FUNCTIONS IN: binding; INVOLVED IN: systemic acquired resistance, defense response to bacterium; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024). & (gnl|cdd|36456 : 619.0) no description available & (reliability: 6862.0) & (original description: Putative ILA, Description = Protein ILITYHIA, PFAM = PF12348)' T '29.2' 'protein.synthesis' 'niben101scf04707_37573-40296' '(at1g64790 : 193.0) ILITYHIA (ILA) is a HEAT repeat protein involved in plant immunity. The gene is also involved in systemic acquired resistance induced by P. syringae expressing avrRps4. Loss-of-function mutants of ILA caused pleiotropic defects in the mutant plants. The mutant plants are smaller in size and the leaves are serrated and yellow to light green in color.; ILITYHIA (ILA); FUNCTIONS IN: binding; INVOLVED IN: systemic acquired resistance, defense response to bacterium; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024). & (reliability: 386.0) & (original description: Putative gcn1, Description = Translational activator GCN1, PFAM = )' T '29.2.1' 'protein.synthesis.ribosomal protein' '' '' '29.2.1.1' 'protein.synthesis.ribosomal protein.prokaryotic' '' '' '29.2.1.1.1' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast' '' '' '29.2.1.1.1.1' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit' '' '' '29.2.1.1.1.1.1' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S1' '' '' '29.2.1.1.1.1.2' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S2' 'niben101scf14012_73973-76680' '(p06355|rr2_tobac : 491.0) Chloroplast 30S ribosomal protein S2 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79284 : 457.0) no description available & (atcg00160 : 439.0) Chloroplast ribosomal protein S2; ribosomal protein S2 (RPS2); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S2 (InterPro:IPR001865), Ribosomal protein S2, conserved site (InterPro:IPR018130), Ribosomal protein S2, bacteria/mitochondria/plastid (InterPro:IPR005706). & (gnl|cdd|36050 : 246.0) no description available & (reliability: 878.0) & (original description: Putative rps2, Description = 30S ribosomal protein S2, chloroplastic, PFAM = PF00318)' T '29.2.1.1.1.1.3' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S3' 'nbv0.5scaffold6582_94657-97310' '(p06357|rr3_tobac : 419.0) Chloroplast 30S ribosomal protein S3 - Nicotiana tabacum (Common tobacco) & (atcg00800 : 381.0) encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex; RESISTANCE TO PSEUDOMONAS SYRINGAE 3 (RPS3); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast, nucleoid, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, prokaryotic type (InterPro:IPR009019), K Homology, type 2 (InterPro:IPR004044), Ribosomal protein S3, N-terminal (InterPro:IPR008282), K homology-like, alpha/beta (InterPro:IPR015946), Ribosomal protein S3, conserved site (InterPro:IPR018280), Ribosomal protein S3, C-terminal (InterPro:IPR001351), Ribosomal protein S3, bacterial (InterPro:IPR005704); BEST Arabidopsis thaliana protein match is: structural constituent of ribosome;protein binding (TAIR:ATMG00090.1). & (gnl|cdd|79266 : 376.0) no description available & (reliability: 762.0) & (original description: Putative rps3, Description = 30S ribosomal protein S3, chloroplastic, PFAM = PF00189)' T '29.2.1.1.1.1.3' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S3' 'niben044scf00004497ctg002_1-1312' '(p06357|rr3_tobac : 184.0) Chloroplast 30S ribosomal protein S3 - Nicotiana tabacum (Common tobacco) & (atcg00800 : 167.0) encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex; RESISTANCE TO PSEUDOMONAS SYRINGAE 3 (RPS3); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast, nucleoid, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, prokaryotic type (InterPro:IPR009019), K Homology, type 2 (InterPro:IPR004044), Ribosomal protein S3, N-terminal (InterPro:IPR008282), K homology-like, alpha/beta (InterPro:IPR015946), Ribosomal protein S3, conserved site (InterPro:IPR018280), Ribosomal protein S3, C-terminal (InterPro:IPR001351), Ribosomal protein S3, bacterial (InterPro:IPR005704); BEST Arabidopsis thaliana protein match is: structural constituent of ribosome;protein binding (TAIR:ATMG00090.1). & (gnl|cdd|79266 : 163.0) no description available & (reliability: 334.0) & (original description: Putative rps3, Description = Rps3, PFAM = )' T '29.2.1.1.1.1.4' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S4' 'nbv0.5scaffold3989_2527-5129' '(gnl|cdd|79226 : 373.0) no description available & (p06359|rr4_tobac : 367.0) Chloroplast 30S ribosomal protein S4 - Nicotiana tabacum (Common tobacco) & (atcg00380 : 323.0) Chloroplast encoded ribosomal protein S4; chloroplast ribosomal protein S4 (RPS4); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912), Ribosomal protein S4, conserved site (InterPro:IPR018079), RNA-binding S4 (InterPro:IPR002942), Ribosomal protein S4, bacterial-type (InterPro:IPR005709). & (gnl|cdd|38511 : 150.0) no description available & (reliability: 646.0) & (original description: Putative rps4, Description = 30S ribosomal protein S4, chloroplastic, PFAM = PF00163;PF01479)' T '29.2.1.1.1.1.4' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S4' 'niben101scf00558_71523-73834' '(gnl|cdd|79226 : 355.0) no description available & (p06359|rr4_tobac : 349.0) Chloroplast 30S ribosomal protein S4 - Nicotiana tabacum (Common tobacco) & (atcg00380 : 308.0) Chloroplast encoded ribosomal protein S4; chloroplast ribosomal protein S4 (RPS4); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912), Ribosomal protein S4, conserved site (InterPro:IPR018079), RNA-binding S4 (InterPro:IPR002942), Ribosomal protein S4, bacterial-type (InterPro:IPR005709). & (gnl|cdd|38511 : 145.0) no description available & (reliability: 616.0) & (original description: Putative rps4, Description = 30S ribosomal protein S4, chloroplastic, PFAM = PF00163;PF01479)' T '29.2.1.1.1.1.5' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S5' 'nbv0.5scaffold1304_140463-143720' '(q9st69|rr5_spiol : 164.0) 30S ribosomal protein S5, chloroplast precursor - Spinacia oleracea (Spinach) & (at2g33800 : 150.0) Ribosomal protein S5 family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: response to cadmium ion, response to cold, translation; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5, bacterial-type (InterPro:IPR005712), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G64880.1); Has 8967 Blast hits to 8967 proteins in 2880 species: Archae - 262; Bacteria - 5121; Metazoa - 552; Fungi - 265; Plants - 165; Viruses - 0; Other Eukaryotes - 2602 (source: NCBI BLink). & (gnl|cdd|79350 : 113.0) no description available & (gnl|cdd|36095 : 92.7) no description available & (reliability: 300.0) & (original description: Putative rps5, Description = 30S ribosomal protein S5, PFAM = PF00333)' T '29.2.1.1.1.1.5' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S5' 'niben044scf00010967ctg012_12624-15852' '(q9st69|rr5_spiol : 162.0) 30S ribosomal protein S5, chloroplast precursor - Spinacia oleracea (Spinach) & (at2g33800 : 152.0) Ribosomal protein S5 family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: response to cadmium ion, response to cold, translation; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5, bacterial-type (InterPro:IPR005712), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G64880.1); Has 8967 Blast hits to 8967 proteins in 2880 species: Archae - 262; Bacteria - 5121; Metazoa - 552; Fungi - 265; Plants - 165; Viruses - 0; Other Eukaryotes - 2602 (source: NCBI BLink). & (gnl|cdd|79350 : 115.0) no description available & (gnl|cdd|36095 : 97.7) no description available & (reliability: 304.0) & (original description: Putative rps5, Description = 30S ribosomal protein S5, PFAM = PF00333)' T '29.2.1.1.1.1.5' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S5' 'niben101scf01436_339629-344601' '(q9st69|rr5_spiol : 304.0) 30S ribosomal protein S5, chloroplast precursor - Spinacia oleracea (Spinach) & (at2g33800 : 293.0) Ribosomal protein S5 family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: response to cadmium ion, response to cold, translation; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5, bacterial-type (InterPro:IPR005712), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G64880.1); Has 8967 Blast hits to 8967 proteins in 2880 species: Archae - 262; Bacteria - 5121; Metazoa - 552; Fungi - 265; Plants - 165; Viruses - 0; Other Eukaryotes - 2602 (source: NCBI BLink). & (gnl|cdd|80701 : 209.0) no description available & (gnl|cdd|36095 : 156.0) no description available & (reliability: 586.0) & (original description: Putative rps5, Description = 30S ribosomal protein S5, chloroplastic, PFAM = PF00333;PF03719)' T '29.2.1.1.1.1.5' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S5' 'niben101scf06570_293900-299479' '(q9st69|rr5_spiol : 301.0) 30S ribosomal protein S5, chloroplast precursor - Spinacia oleracea (Spinach) & (at2g33800 : 294.0) Ribosomal protein S5 family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: response to cadmium ion, response to cold, translation; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5, bacterial-type (InterPro:IPR005712), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G64880.1); Has 8967 Blast hits to 8967 proteins in 2880 species: Archae - 262; Bacteria - 5121; Metazoa - 552; Fungi - 265; Plants - 165; Viruses - 0; Other Eukaryotes - 2602 (source: NCBI BLink). & (gnl|cdd|80701 : 210.0) no description available & (gnl|cdd|36095 : 160.0) no description available & (reliability: 588.0) & (original description: Putative rps5, Description = 30S ribosomal protein S5, chloroplastic, PFAM = PF03719;PF00333)' T '29.2.1.1.1.1.6' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S6' 'niben101scf00132_310500-320901' '(at1g64510 : 219.0) Translation elongation factor EF1B/ribosomal protein S6 family protein; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, ribosome, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Ribosomal protein S6 (InterPro:IPR000529); Has 1523 Blast hits to 1523 proteins in 532 species: Archae - 0; Bacteria - 1112; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 375 (source: NCBI BLink). & (p82403|rr6_spiol : 219.0) 30S ribosomal protein S6 alpha, chloroplast precursor [Contains: 30S ribosomal protein S6 beta; 30S ribosomal protein S6 gamma; 30S ribosomal protein S6 delta; 30S ribosomal protein S6 epsilon] (Fragment) - Spinacia oleracea (Spinach) & (reliability: 438.0) & (original description: Putative RPS6, Description = 30S ribosomal protein S6 alpha, chloroplastic, PFAM = PF01250)' T '29.2.1.1.1.1.6' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S6' 'niben101scf02011_965443-969723' '(at1g64510 : 232.0) Translation elongation factor EF1B/ribosomal protein S6 family protein; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, ribosome, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Ribosomal protein S6 (InterPro:IPR000529); Has 1523 Blast hits to 1523 proteins in 532 species: Archae - 0; Bacteria - 1112; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 375 (source: NCBI BLink). & (p82403|rr6_spiol : 219.0) 30S ribosomal protein S6 alpha, chloroplast precursor [Contains: 30S ribosomal protein S6 beta; 30S ribosomal protein S6 gamma; 30S ribosomal protein S6 delta; 30S ribosomal protein S6 epsilon] (Fragment) - Spinacia oleracea (Spinach) & (reliability: 464.0) & (original description: Putative RPS6, Description = 30S ribosomal protein S6 alpha, chloroplastic, PFAM = PF01250)' T '29.2.1.1.1.1.7' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S7' 'nbv0.3scaffold72908_777-3169' '(p62732|rr7_tobac : 220.0) Chloroplast 30S ribosomal protein S7 - Nicotiana tabacum (Common tobacco) & (atcg00900 : 217.0) encodes a chloroplast ribosomal protein S7, a constituent of the small subunit of the ribosomal complex; RPS7.1; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7, bacterial-type (InterPro:IPR005717), Ribosomal protein S7, conserved site (InterPro:IPR020606), Ribosomal protein S7 (InterPro:IPR000235); BEST Arabidopsis thaliana protein match is: ribosomal protein S7 (TAIR:ATCG01240.1). & (gnl|cdd|79271 : 206.0) no description available & (gnl|cdd|38501 : 130.0) no description available & (reliability: 434.0) & (original description: Putative rpl2, Description = 30S ribosomal protein S7, chloroplastic, PFAM = PF00177)' T '29.2.1.1.1.1.7' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S7' 'nbv0.3scaffold91083_3834-5266' '(p62732|rr7_tobac : 208.0) Chloroplast 30S ribosomal protein S7 - Nicotiana tabacum (Common tobacco) & (atcg00900 : 206.0) encodes a chloroplast ribosomal protein S7, a constituent of the small subunit of the ribosomal complex; RPS7.1; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7, bacterial-type (InterPro:IPR005717), Ribosomal protein S7, conserved site (InterPro:IPR020606), Ribosomal protein S7 (InterPro:IPR000235); BEST Arabidopsis thaliana protein match is: ribosomal protein S7 (TAIR:ATCG01240.1). & (gnl|cdd|79271 : 197.0) no description available & (gnl|cdd|38501 : 129.0) no description available & (reliability: 412.0) & (original description: Putative rps7, Description = Ribosomal protein S7, PFAM = PF00177)' T '29.2.1.1.1.1.7' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S7' 'nbv0.3scaffold117614_1-2031' '(p62732|rr7_tobac : 176.0) Chloroplast 30S ribosomal protein S7 - Nicotiana tabacum (Common tobacco) & (atcg00900 : 174.0) encodes a chloroplast ribosomal protein S7, a constituent of the small subunit of the ribosomal complex; RPS7.1; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7, bacterial-type (InterPro:IPR005717), Ribosomal protein S7, conserved site (InterPro:IPR020606), Ribosomal protein S7 (InterPro:IPR000235); BEST Arabidopsis thaliana protein match is: ribosomal protein S7 (TAIR:ATCG01240.1). & (gnl|cdd|79271 : 171.0) no description available & (gnl|cdd|38501 : 107.0) no description available & (reliability: 348.0) & (original description: Putative rps7, Description = Ribosomal protein S7, PFAM = PF00177)' T '29.2.1.1.1.1.7' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S7' 'niben044scf00046488ctg006_3994-6310' '(p62732|rr7_tobac : 167.0) Chloroplast 30S ribosomal protein S7 - Nicotiana tabacum (Common tobacco) & (atcg00900 : 164.0) encodes a chloroplast ribosomal protein S7, a constituent of the small subunit of the ribosomal complex; RPS7.1; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7, bacterial-type (InterPro:IPR005717), Ribosomal protein S7, conserved site (InterPro:IPR020606), Ribosomal protein S7 (InterPro:IPR000235); BEST Arabidopsis thaliana protein match is: ribosomal protein S7 (TAIR:ATCG01240.1). & (gnl|cdd|79271 : 158.0) no description available & (gnl|cdd|38501 : 103.0) no description available & (reliability: 328.0) & (original description: Putative rps7, Description = Ribosomal protein S7, PFAM = PF00177)' T '29.2.1.1.1.1.7' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S7' 'niben101scf03484_344859-395652' '(p62732|rr7_tobac : 171.0) Chloroplast 30S ribosomal protein S7 - Nicotiana tabacum (Common tobacco) & (atcg00900 : 169.0) encodes a chloroplast ribosomal protein S7, a constituent of the small subunit of the ribosomal complex; RPS7.1; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7, bacterial-type (InterPro:IPR005717), Ribosomal protein S7, conserved site (InterPro:IPR020606), Ribosomal protein S7 (InterPro:IPR000235); BEST Arabidopsis thaliana protein match is: ribosomal protein S7 (TAIR:ATCG01240.1). & (gnl|cdd|79271 : 168.0) no description available & (gnl|cdd|38501 : 105.0) no description available & (reliability: 338.0) & (original description: Putative rps7, Description = Ribosomal protein S7, PFAM = PF00177)' T '29.2.1.1.1.1.8' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S8' 'nbv0.5scaffold4427_259709-261196' '(gnl|cdd|79260 : 213.0) no description available & (q8s8v8|rr8_atrbe : 206.0) Chloroplast 30S ribosomal protein S8 - Atropa belladonna (Belladonna) (Deadly nightshade) & (atcg00770 : 184.0) chloroplast 30S ribosomal protein S8; ribosomal protein S8 (RPS8); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8 (InterPro:IPR000630). & (gnl|cdd|36965 : 110.0) no description available & (reliability: 368.0) & (original description: Putative rps8, Description = 30S ribosomal protein S8, chloroplastic, PFAM = PF00410)' T '29.2.1.1.1.1.9' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S9' 'nbv0.3scaffold16653_4716-8619' '(p82278|rr9_spiol : 226.0) 30S ribosomal protein S9, chloroplast precursor (Fragment) - Spinacia oleracea (Spinach) & (at1g74970 : 221.0) ribosomal protein S9, nuclear encoded component of the chloroplast ribosome; ribosomal protein S9 (RPS9); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S9 (InterPro:IPR000754), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S9, conserved site (InterPro:IPR020574); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 domain 2-like superfamily protein (TAIR:AT3G49080.1); Has 7998 Blast hits to 7997 proteins in 2816 species: Archae - 205; Bacteria - 5347; Metazoa - 103; Fungi - 127; Plants - 149; Viruses - 0; Other Eukaryotes - 2067 (source: NCBI BLink). & (gnl|cdd|36910 : 178.0) no description available & (gnl|cdd|80536 : 176.0) no description available & (reliability: 442.0) & (original description: Putative rps9, Description = 30S ribosomal protein S9, chloroplastic, PFAM = PF00380)' T '29.2.1.1.1.1.9' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S9' 'niben101scf04107_73238-77612' '(p82278|rr9_spiol : 229.0) 30S ribosomal protein S9, chloroplast precursor (Fragment) - Spinacia oleracea (Spinach) & (at1g74970 : 223.0) ribosomal protein S9, nuclear encoded component of the chloroplast ribosome; ribosomal protein S9 (RPS9); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S9 (InterPro:IPR000754), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S9, conserved site (InterPro:IPR020574); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 domain 2-like superfamily protein (TAIR:AT3G49080.1); Has 7998 Blast hits to 7997 proteins in 2816 species: Archae - 205; Bacteria - 5347; Metazoa - 103; Fungi - 127; Plants - 149; Viruses - 0; Other Eukaryotes - 2067 (source: NCBI BLink). & (gnl|cdd|36910 : 177.0) no description available & (gnl|cdd|80536 : 177.0) no description available & (reliability: 446.0) & (original description: Putative PRPS9, Description = 30S ribosomal protein S9, chloroplastic, PFAM = PF00380)' T '29.2.1.1.1.1.10' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S10' 'niben101scf05581_69090-76154' '(q9m4y3|rr10_mescr : 213.0) 30S ribosomal protein S10, chloroplast precursor - Mesembryanthemum crystallinum (Common ice plant) & (at3g13120 : 203.0) Ribosomal protein S10p/S20e family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation; LOCATED IN: small ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S10 subgroup (InterPro:IPR005731), Ribosomal protein S10, conserved site (InterPro:IPR018268), Ribosomal protein S10 (InterPro:IPR001848). & (gnl|cdd|80713 : 149.0) no description available & (gnl|cdd|36118 : 92.7) no description available & (reliability: 406.0) & (original description: Putative RPS10, Description = 30S ribosomal protein S10, chloroplastic, PFAM = PF00338)' T '29.2.1.1.1.1.11' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S11' 'nbv0.5scaffold999_516747-518194' '(gnl|cdd|79259 : 205.0) no description available & (q2vee7|rr11_soltu : 186.0) Chloroplast 30S ribosomal protein S11 - Solanum tuberosum (Potato) & (atcg00750 : 174.0) 30S chloroplast ribosomal protein S11; ribosomal protein S11 (RPS11); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S11, bacterial-type (InterPro:IPR019981), Ribosomal protein S11 (InterPro:IPR001971), Ribosomal S11, conserved site (InterPro:IPR018102); BEST Arabidopsis thaliana protein match is: Ribosomal protein S11 family protein (TAIR:AT3G52580.1). & (gnl|cdd|35629 : 152.0) no description available & (reliability: 348.0) & (original description: Putative rps11, Description = 30S ribosomal protein S11, chloroplastic, PFAM = PF00411)' T '29.2.1.1.1.1.12' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S12' '' '' '29.2.1.1.1.1.13' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S13' 'niben101scf10002_108969-113272' '(at5g14320 : 222.0) Ribosomal protein S13/S18 family; FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleic acid binding; INVOLVED IN: translation; LOCATED IN: small ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13-like, H2TH (InterPro:IPR010979), Ribosomal protein S13 (InterPro:IPR001892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S18 family (TAIR:AT1G77750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|81460 : 159.0) no description available & (q8lpw2|rt13_soybn : 112.0) Small ribosomal subunit protein S13, mitochondrial precursor - Glycine max (Soybean) & (gnl|cdd|38521 : 105.0) no description available & (reliability: 444.0) & (original description: Putative RPS13, Description = 30S ribosomal protein S13, chloroplastic, PFAM = PF00416)' T '29.2.1.1.1.1.14' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S14' 'niben101scf00568_514310-515672' '(gnl|cdd|79291 : 168.0) no description available & (p06371|rr14_tobac : 140.0) Chloroplast 30S ribosomal protein S14 - Nicotiana tabacum (Common tobacco) & (atcg00330 : 129.0) 30S chloroplast ribosomal protein S14; chloroplast ribosomal protein S14 (RPS14); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S14 (InterPro:IPR001209), Ribosomal protein S14, conserved site (InterPro:IPR018271). & (gnl|cdd|36952 : 100.0) no description available & (reliability: 258.0) & (original description: Putative rps14, Description = 30S ribosomal protein S14, chloroplastic, PFAM = PF00253)' T '29.2.1.1.1.1.15' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S15' 'niben101scf02762_219854-221763' '(p06373|rr15_tobac : 121.0) Chloroplast 30S ribosomal protein S15 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79245 : 114.0) no description available & (atcg01120 : 102.0) encodes a chloroplast ribosomal protein S15, a constituent of the small subunit of the ribosomal complex; chloroplast ribosomal protein S15 (RPS15); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S15 (InterPro:IPR000589), Ribosomal protein S15, bacterial-type (InterPro:IPR005290), S15/NS1, RNA-binding (InterPro:IPR009068). & (reliability: 204.0) & (original description: Putative rps15, Description = 30S ribosomal protein S15, chloroplastic, PFAM = PF00312)' T '29.2.1.1.1.1.16' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S16' 'niben101scf03713_70734-73851' '(gnl|cdd|79224 : 152.0) no description available & (p06374|rr16_tobac : 150.0) Chloroplast 30S ribosomal protein S16 - Nicotiana tabacum (Common tobacco) & (atcg00050 : 114.0) Homologous to the bacterial ribosomal protein S16; ribosomal protein S16 (RPS16); CONTAINS InterPro DOMAIN/s: Ribosomal protein S16, conserved site (InterPro:IPR020592), Ribosomal protein S16 (InterPro:IPR000307); BEST Arabidopsis thaliana protein match is: small subunit ribosomal protein 16 (TAIR:AT4G34620.1). & (gnl|cdd|38629 : 90.8) no description available & (reliability: 228.0) & (original description: Putative rps16, Description = 30S ribosomal protein S16, chloroplastic, PFAM = PF00886)' T '29.2.1.1.1.1.17' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S17' 'niben101scf21202_30414-32887' '(at1g79850 : 99.8) nuclear-encoded 30S chloroplast ribosomal protein S17; ribosomal protein S17 (RPS17); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, plastid small ribosomal subunit, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S17, conserved site (InterPro:IPR019979), Ribosomal protein S17 (InterPro:IPR000266); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT1G49400.1); Has 7449 Blast hits to 7449 proteins in 2625 species: Archae - 136; Bacteria - 5329; Metazoa - 5; Fungi - 63; Plants - 102; Viruses - 0; Other Eukaryotes - 1814 (source: NCBI BLink). & (p17092|rr17_pea : 94.0) 30S ribosomal protein S17, chloroplast precursor (CS17) (Fragment) - Pisum sativum (Garden pea) & (gnl|cdd|64243 : 93.0) no description available & (gnl|cdd|36951 : 81.7) no description available & (reliability: 199.6) & (original description: Putative RPS17, Description = 30S ribosomal protein S17, chloroplastic, PFAM = PF00366)' T '29.2.1.1.1.1.18' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S18' 'nbv0.3scaffold43914_10318-12617' '(gnl|cdd|79294 : 138.0) no description available & (p69660|rr18_tobac : 114.0) Chloroplast 30S ribosomal protein S18 - Nicotiana tabacum (Common tobacco) & (atcg00650 : 97.4) chloroplast-encoded ribosomal protein S18; ribosomal protein S18 (RPS18); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S18, conserved site (InterPro:IPR018275), Ribosomal protein S18 (InterPro:IPR001648). & (reliability: 194.8) & (original description: Putative rps18, Description = 30S ribosomal protein S18, chloroplastic, PFAM = PF01084)' T '29.2.1.1.1.1.18' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S18' 'niben101scf08684_449046-450488' '(gnl|cdd|79294 : 138.0) no description available & (p69660|rr18_tobac : 116.0) Chloroplast 30S ribosomal protein S18 - Nicotiana tabacum (Common tobacco) & (atcg00650 : 99.4) chloroplast-encoded ribosomal protein S18; ribosomal protein S18 (RPS18); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S18, conserved site (InterPro:IPR018275), Ribosomal protein S18 (InterPro:IPR001648). & (reliability: 198.8) & (original description: Putative rps18, Description = 30S ribosomal protein S18, chloroplastic, PFAM = PF01084)' T '29.2.1.1.1.1.19' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S19' '' '' '29.2.1.1.1.1.20' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S20' 'niben044scf00037198ctg007_1-5151' '(at3g15190 : 131.0) chloroplast 30S ribosomal protein S20, putative; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S20 (InterPro:IPR002583); Has 3989 Blast hits to 3989 proteins in 1480 species: Archae - 0; Bacteria - 3264; Metazoa - 2; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 674 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative RPS20, Description = 30S ribosomal protein S20, chloroplastic, PFAM = PF01649)' T '29.2.1.1.1.1.21' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S21' '' '' '29.2.1.1.1.1.31' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S31' '' '' '29.2.1.1.1.1.83' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.PSRP3' 'nbv0.3scaffold90569_710-3971' '(p82412|rrp3_spiol : 160.0) Plastid-specific 30S ribosomal protein 3, chloroplast precursor (PSRP-3) - Spinacia oleracea (Spinach) & (at1g68590 : 155.0) Ribosomal protein PSRP-3/Ycf65; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein PSRP-3/Ycf65 (InterPro:IPR006924); BEST Arabidopsis thaliana protein match is: Ribosomal protein PSRP-3/Ycf65 (TAIR:AT5G15760.1); Has 392 Blast hits to 392 proteins in 108 species: Archae - 0; Bacteria - 133; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 183 (source: NCBI BLink). & (gnl|cdd|81027 : 102.0) no description available & (reliability: 310.0) & (original description: Putative ycf65, Description = Ycf65-like protein, PFAM = PF04839)' T '29.2.1.1.1.1.83' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.PSRP3' 'nbv0.5scaffold506_441407-461944' '(p82412|rrp3_spiol : 146.0) Plastid-specific 30S ribosomal protein 3, chloroplast precursor (PSRP-3) - Spinacia oleracea (Spinach) & (at1g68590 : 142.0) Ribosomal protein PSRP-3/Ycf65; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein PSRP-3/Ycf65 (InterPro:IPR006924); BEST Arabidopsis thaliana protein match is: Ribosomal protein PSRP-3/Ycf65 (TAIR:AT5G15760.1); Has 392 Blast hits to 392 proteins in 108 species: Archae - 0; Bacteria - 133; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 183 (source: NCBI BLink). & (gnl|cdd|81027 : 93.5) no description available & (reliability: 284.0) & (original description: Putative ycf65, Description = PSRP-3, PFAM = PF04839)' T '29.2.1.1.1.1.83' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.PSRP3' 'niben101scf02522_201235-211700' '(p82412|rrp3_spiol : 162.0) Plastid-specific 30S ribosomal protein 3, chloroplast precursor (PSRP-3) - Spinacia oleracea (Spinach) & (at1g68590 : 155.0) Ribosomal protein PSRP-3/Ycf65; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein PSRP-3/Ycf65 (InterPro:IPR006924); BEST Arabidopsis thaliana protein match is: Ribosomal protein PSRP-3/Ycf65 (TAIR:AT5G15760.1); Has 392 Blast hits to 392 proteins in 108 species: Archae - 0; Bacteria - 133; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 183 (source: NCBI BLink). & (gnl|cdd|81027 : 103.0) no description available & (reliability: 310.0) & (original description: Putative ycf65, Description = Ycf65-like protein, PFAM = PF04839)' T '29.2.1.1.1.1.83' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.PSRP3' 'niben101scf03015_373749-377923' '(p82412|rrp3_spiol : 176.0) Plastid-specific 30S ribosomal protein 3, chloroplast precursor (PSRP-3) - Spinacia oleracea (Spinach) & (at1g68590 : 158.0) Ribosomal protein PSRP-3/Ycf65; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein PSRP-3/Ycf65 (InterPro:IPR006924); BEST Arabidopsis thaliana protein match is: Ribosomal protein PSRP-3/Ycf65 (TAIR:AT5G15760.1); Has 392 Blast hits to 392 proteins in 108 species: Archae - 0; Bacteria - 133; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 183 (source: NCBI BLink). & (gnl|cdd|81027 : 102.0) no description available & (reliability: 316.0) & (original description: Putative PSRP3, Description = 30S ribosomal protein 3, chloroplastic, PFAM = PF04839)' T '29.2.1.1.1.1.83' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.PSRP3' 'niben101scf04196_474630-483691' '(p82412|rrp3_spiol : 174.0) Plastid-specific 30S ribosomal protein 3, chloroplast precursor (PSRP-3) - Spinacia oleracea (Spinach) & (at5g15760 : 156.0) Ribosomal protein PSRP-3/Ycf65; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast, plastid; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein PSRP-3/Ycf65 (InterPro:IPR006924); BEST Arabidopsis thaliana protein match is: Ribosomal protein PSRP-3/Ycf65 (TAIR:AT1G68590.1); Has 388 Blast hits to 388 proteins in 107 species: Archae - 0; Bacteria - 133; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 180 (source: NCBI BLink). & (gnl|cdd|81027 : 102.0) no description available & (reliability: 312.0) & (original description: Putative mut3G, Description = Ycf65-like protein, PFAM = PF04839)' T '29.2.1.1.1.1.83' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.PSRP3' 'niben101scf09372_98716-119973' '(p82412|rrp3_spiol : 141.0) Plastid-specific 30S ribosomal protein 3, chloroplast precursor (PSRP-3) - Spinacia oleracea (Spinach) & (at1g68590 : 138.0) Ribosomal protein PSRP-3/Ycf65; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein PSRP-3/Ycf65 (InterPro:IPR006924); BEST Arabidopsis thaliana protein match is: Ribosomal protein PSRP-3/Ycf65 (TAIR:AT5G15760.1); Has 392 Blast hits to 392 proteins in 108 species: Archae - 0; Bacteria - 133; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 183 (source: NCBI BLink). & (gnl|cdd|81027 : 90.4) no description available & (reliability: 276.0) & (original description: Putative ycf65, Description = PSRP-3, PFAM = PF04839)' T '29.2.1.1.1.1.530' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S30A' 'niben101scf04099_913363-921973' '(at5g24490 : 315.0) 30S ribosomal protein, putative; FUNCTIONS IN: structural constituent of ribosome, binding; INVOLVED IN: translation, primary metabolic process; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S30Ae/sigma 54 modulation protein (InterPro:IPR003489); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p19954|rr30_spiol : 310.0) Plastid-specific 30S ribosomal protein 1, chloroplast precursor (PSRP-1) (CS-S5) (CS5) (S22) (Ribosomal protein 1) - Spinacia oleracea (Spinach) & (gnl|cdd|66197 : 89.1) no description available & (reliability: 630.0) & (original description: Putative PSRP1, Description = Ribosome-binding factor PSRP1, chloroplastic, PFAM = PF16321;PF02482)' T '29.2.1.1.1.1.530' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S30A' 'niben101scf15666_88725-99124' '(at5g24490 : 297.0) 30S ribosomal protein, putative; FUNCTIONS IN: structural constituent of ribosome, binding; INVOLVED IN: translation, primary metabolic process; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S30Ae/sigma 54 modulation protein (InterPro:IPR003489); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p19954|rr30_spiol : 288.0) Plastid-specific 30S ribosomal protein 1, chloroplast precursor (PSRP-1) (CS-S5) (CS5) (S22) (Ribosomal protein 1) - Spinacia oleracea (Spinach) & (gnl|cdd|66197 : 91.4) no description available & (reliability: 594.0) & (original description: Putative yhbH, Description = Putative sigma-54 modulation protein, PFAM = PF02482;PF16321)' T '29.2.1.1.1.2' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit' '' '' '29.2.1.1.1.2.1' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L1' 'niben044scf00005939ctg008_952-8550' '(at3g63490 : 401.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: chloroplast thylakoid membrane, ribosome, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 3-layer alpha/beta-sandwich (InterPro:IPR016095), Ribosomal protein L1, bacterial-type (InterPro:IPR005878); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G42710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9le95|rk1_spiol : 391.0) 50S ribosomal protein L1, chloroplast precursor (CL1) - Spinacia oleracea (Spinach) & (gnl|cdd|79341 : 334.0) no description available & (gnl|cdd|36782 : 229.0) no description available & (reliability: 802.0) & (original description: Putative RPL1, Description = 50S ribosomal protein L1, chloroplastic, PFAM = PF00687)' T '29.2.1.1.1.2.1' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L1' 'niben101scf03253_203232-210873' '(at3g63490 : 402.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: chloroplast thylakoid membrane, ribosome, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 3-layer alpha/beta-sandwich (InterPro:IPR016095), Ribosomal protein L1, bacterial-type (InterPro:IPR005878); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G42710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9le95|rk1_spiol : 390.0) 50S ribosomal protein L1, chloroplast precursor (CL1) - Spinacia oleracea (Spinach) & (gnl|cdd|79341 : 334.0) no description available & (gnl|cdd|36782 : 231.0) no description available & (reliability: 804.0) & (original description: Putative RPL1, Description = 50S ribosomal protein L1, chloroplastic, PFAM = PF00687)' T '29.2.1.1.1.2.2' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L2' 'niben044scf00032038ctg001_1-1443' '(p06379|rk2_tobac : 238.0) Chloroplast 50S ribosomal protein L2 - Nicotiana tabacum (Common tobacco) & (atcg01310 : 233.0) encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex; ribosomal protein L2 (RPL2.2); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation protein SH3-like, subgroup (InterPro:IPR014722), Ribosomal protein L2 (InterPro:IPR002171), Ribosomal protein L2, bacterial-type (InterPro:IPR005880), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein L2, C-terminal (InterPro:IPR022669), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2, conserved site (InterPro:IPR022671); BEST Arabidopsis thaliana protein match is: ribosomal protein L2 (TAIR:ATCG00830.1). & (gnl|cdd|79270 : 194.0) no description available & (gnl|cdd|35659 : 131.0) no description available & (reliability: 466.0) & (original description: Putative rpl2, Description = Ribosomal protein L2, PFAM = PF00181)' T '29.2.1.1.1.2.2' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L2' 'niben101scf05776_138245-141159' '(gnl|cdd|79270 : 163.0) no description available & (q4vzk5|rk2_cucsa : 146.0) Chloroplast 50S ribosomal protein L2 - Cucumis sativus (Cucumber) & (atcg01310 : 139.0) encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex; ribosomal protein L2 (RPL2.2); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation protein SH3-like, subgroup (InterPro:IPR014722), Ribosomal protein L2 (InterPro:IPR002171), Ribosomal protein L2, bacterial-type (InterPro:IPR005880), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein L2, C-terminal (InterPro:IPR022669), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2, conserved site (InterPro:IPR022671); BEST Arabidopsis thaliana protein match is: ribosomal protein L2 (TAIR:ATCG00830.1). & (gnl|cdd|36117 : 94.4) no description available & (reliability: 278.0) & (original description: Putative rps19, Description = 30S ribosomal protein S19, chloroplastic, PFAM = PF03947;PF00203)' T '29.2.1.1.1.2.2' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L2' 'niben101scf06840_14141-16835' '(p06379|rk2_tobac : 489.0) Chloroplast 50S ribosomal protein L2 - Nicotiana tabacum (Common tobacco) & (atcg01310 : 474.0) encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex; ribosomal protein L2 (RPL2.2); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation protein SH3-like, subgroup (InterPro:IPR014722), Ribosomal protein L2 (InterPro:IPR002171), Ribosomal protein L2, bacterial-type (InterPro:IPR005880), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein L2, C-terminal (InterPro:IPR022669), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2, conserved site (InterPro:IPR022671); BEST Arabidopsis thaliana protein match is: ribosomal protein L2 (TAIR:ATCG00830.1). & (gnl|cdd|79270 : 437.0) no description available & (gnl|cdd|35659 : 271.0) no description available & (reliability: 948.0) & (original description: Putative rpl2, Description = 50S ribosomal protein L2, chloroplastic, PFAM = PF03947;PF00181)' T '29.2.1.1.1.2.3' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L3' 'niben044scf00026113ctg009_4820-9554' '(at3g17465 : 450.0) encodes a putative L3 ribosomal protein targeted to the plastid.; ribosomal protein L3 plastid (RPL3P); CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, bacterial/organelle-type (InterPro:IPR019927), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein L3 family protein (TAIR:AT2G43030.1); Has 8719 Blast hits to 8719 proteins in 2855 species: Archae - 267; Bacteria - 5444; Metazoa - 136; Fungi - 140; Plants - 91; Viruses - 0; Other Eukaryotes - 2641 (source: NCBI BLink). & (gnl|cdd|38351 : 358.0) no description available & (gnl|cdd|80437 : 271.0) no description available & (o80360|rk3_tobac : 137.0) 50S ribosomal protein L3, chloroplast precursor (Fragment) - Nicotiana tabacum (Common tobacco) & (reliability: 900.0) & (original description: Putative RPL3B, Description = 50S ribosomal protein L3-2, chloroplastic, PFAM = PF00297)' T '29.2.1.1.1.2.3' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L3' 'niben101scf04509_316328-320576' '(o80360|rk3_tobac : 405.0) 50S ribosomal protein L3, chloroplast precursor (Fragment) - Nicotiana tabacum (Common tobacco) & (at2g43030 : 318.0) Ribosomal protein L3 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, bacterial/organelle-type (InterPro:IPR019927), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: ribosomal protein L3 plastid (TAIR:AT3G17465.1); Has 8745 Blast hits to 8744 proteins in 2878 species: Archae - 254; Bacteria - 5494; Metazoa - 134; Fungi - 132; Plants - 92; Viruses - 0; Other Eukaryotes - 2639 (source: NCBI BLink). & (gnl|cdd|38351 : 272.0) no description available & (gnl|cdd|80437 : 254.0) no description available & (reliability: 636.0) & (original description: Putative RPL3, Description = 50S ribosomal protein L3, chloroplastic, PFAM = PF00297)' T '29.2.1.1.1.2.3' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L3' 'niben101scf05816_6675-11130' '(o80360|rk3_tobac : 404.0) 50S ribosomal protein L3, chloroplast precursor (Fragment) - Nicotiana tabacum (Common tobacco) & (at2g43030 : 316.0) Ribosomal protein L3 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, bacterial/organelle-type (InterPro:IPR019927), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: ribosomal protein L3 plastid (TAIR:AT3G17465.1); Has 8745 Blast hits to 8744 proteins in 2878 species: Archae - 254; Bacteria - 5494; Metazoa - 134; Fungi - 132; Plants - 92; Viruses - 0; Other Eukaryotes - 2639 (source: NCBI BLink). & (gnl|cdd|38351 : 271.0) no description available & (gnl|cdd|80437 : 255.0) no description available & (reliability: 632.0) & (original description: Putative RPL3, Description = 50S ribosomal protein L3, chloroplastic, PFAM = PF00297)' T '29.2.1.1.1.2.4' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L4' 'nbv0.5scaffold2437_50613-53541' '(o80361|rk4_tobac : 389.0) 50S ribosomal protein L4, chloroplast precursor (CL4) (R-protein L4) - Nicotiana tabacum (Common tobacco) & (at1g07320 : 267.0) encodes a plastid ribosomal protein L4; ribosomal protein L4 (RPL4); FUNCTIONS IN: structural constituent of ribosome, poly(U) RNA binding; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4 (InterPro:IPR015498), Ribosomal protein L4/L1e, bacterial-type (InterPro:IPR013005), Ribosomal protein L4/L1e (InterPro:IPR002136); BEST Arabidopsis thaliana protein match is: Ribosomal protein L4/L1 family (TAIR:AT2G20060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81519 : 217.0) no description available & (gnl|cdd|36837 : 210.0) no description available & (reliability: 534.0) & (original description: Putative RPL4, Description = 50S ribosomal protein L4, chloroplastic, PFAM = PF00573)' T '29.2.1.1.1.2.4' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L4' 'niben101scf00978_1529787-1537730' '(o80361|rk4_tobac : 401.0) 50S ribosomal protein L4, chloroplast precursor (CL4) (R-protein L4) - Nicotiana tabacum (Common tobacco) & (at1g07320 : 264.0) encodes a plastid ribosomal protein L4; ribosomal protein L4 (RPL4); FUNCTIONS IN: structural constituent of ribosome, poly(U) RNA binding; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4 (InterPro:IPR015498), Ribosomal protein L4/L1e, bacterial-type (InterPro:IPR013005), Ribosomal protein L4/L1e (InterPro:IPR002136); BEST Arabidopsis thaliana protein match is: Ribosomal protein L4/L1 family (TAIR:AT2G20060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81519 : 216.0) no description available & (gnl|cdd|36837 : 210.0) no description available & (reliability: 528.0) & (original description: Putative RPL4, Description = 50S ribosomal protein L4, chloroplastic, PFAM = PF00573)' T '29.2.1.1.1.2.5' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L5' 'nbv0.3scaffold59408_1-2016' '(at4g01310 : 187.0) Ribosomal L5P family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, C-terminal (InterPro:IPR020928), Ribosomal protein L5, N-terminal (InterPro:IPR020927); Has 9219 Blast hits to 9219 proteins in 3016 species: Archae - 312; Bacteria - 5408; Metazoa - 222; Fungi - 280; Plants - 343; Viruses - 0; Other Eukaryotes - 2654 (source: NCBI BLink). & (p82192|rk5_spiol : 170.0) 50S ribosomal protein L5, chloroplast - Spinacia oleracea (Spinach) & (gnl|cdd|80445 : 155.0) no description available & (gnl|cdd|35619 : 147.0) no description available & (reliability: 374.0) & (original description: Putative rplE, Description = 50S ribosomal protein L5, PFAM = PF00281)' T '29.2.1.1.1.2.5' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L5' 'nbv0.5scaffold8077_16385-22327' '(at4g01310 : 345.0) Ribosomal L5P family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, C-terminal (InterPro:IPR020928), Ribosomal protein L5, N-terminal (InterPro:IPR020927); Has 9219 Blast hits to 9219 proteins in 3016 species: Archae - 312; Bacteria - 5408; Metazoa - 222; Fungi - 280; Plants - 343; Viruses - 0; Other Eukaryotes - 2654 (source: NCBI BLink). & (p82192|rk5_spiol : 342.0) 50S ribosomal protein L5, chloroplast - Spinacia oleracea (Spinach) & (gnl|cdd|80445 : 290.0) no description available & (gnl|cdd|35619 : 251.0) no description available & (reliability: 690.0) & (original description: Putative rplE, Description = 50S ribosomal protein L5, PFAM = PF00281;PF00673)' T '29.2.1.1.1.2.5' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L5' 'niben101scf01448_200535-203202' '(at4g01310 : 188.0) Ribosomal L5P family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, C-terminal (InterPro:IPR020928), Ribosomal protein L5, N-terminal (InterPro:IPR020927); Has 9219 Blast hits to 9219 proteins in 3016 species: Archae - 312; Bacteria - 5408; Metazoa - 222; Fungi - 280; Plants - 343; Viruses - 0; Other Eukaryotes - 2654 (source: NCBI BLink). & (p82192|rk5_spiol : 170.0) 50S ribosomal protein L5, chloroplast - Spinacia oleracea (Spinach) & (gnl|cdd|80445 : 155.0) no description available & (gnl|cdd|35619 : 146.0) no description available & (reliability: 376.0) & (original description: Putative RPL5, Description = 50S ribosomal protein L5, chloroplastic, PFAM = PF00281)' T '29.2.1.1.1.2.5' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L5' 'niben101scf02585_85284-92171' '(p82192|rk5_spiol : 344.0) 50S ribosomal protein L5, chloroplast - Spinacia oleracea (Spinach) & (at4g01310 : 343.0) Ribosomal L5P family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, C-terminal (InterPro:IPR020928), Ribosomal protein L5, N-terminal (InterPro:IPR020927); Has 9219 Blast hits to 9219 proteins in 3016 species: Archae - 312; Bacteria - 5408; Metazoa - 222; Fungi - 280; Plants - 343; Viruses - 0; Other Eukaryotes - 2654 (source: NCBI BLink). & (gnl|cdd|80445 : 291.0) no description available & (gnl|cdd|35619 : 252.0) no description available & (reliability: 686.0) & (original description: Putative RPL5, Description = 50S ribosomal protein L5, chloroplastic, PFAM = PF00673;PF00281)' T '29.2.1.1.1.2.6' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L6' 'nbv0.3scaffold65254_4464-10488' '(at1g05190 : 318.0) embryo defective 2394 (emb2394); FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast, large ribosomal subunit, membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6 (InterPro:IPR000702), Ribosomal protein L6, bacterial-type (InterPro:IPR019906), Ribosomal protein L6, alpha-beta domain (InterPro:IPR020040), Ribosomal protein L6, conserved site (InterPro:IPR002358); BEST Arabidopsis thaliana protein match is: ribosomal protein L6 family protein (TAIR:AT2G18400.1); Has 8498 Blast hits to 8498 proteins in 2848 species: Archae - 226; Bacteria - 5468; Metazoa - 15; Fungi - 189; Plants - 125; Viruses - 0; Other Eukaryotes - 2475 (source: NCBI BLink). & (gnl|cdd|81626 : 241.0) no description available & (gnl|cdd|38464 : 228.0) no description available & (p46748|rm06_prowi : 95.1) Mitochondrial 60S ribosomal protein L6 - Prototheca wickerhamii & (reliability: 636.0) & (original description: Putative RPL6, Description = 50S ribosomal protein L6, chloroplastic, PFAM = PF00347;PF00347)' T '29.2.1.1.1.2.6' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L6' 'niben101scf00419_120140-125555' '(at1g05190 : 327.0) embryo defective 2394 (emb2394); FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast, large ribosomal subunit, membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6 (InterPro:IPR000702), Ribosomal protein L6, bacterial-type (InterPro:IPR019906), Ribosomal protein L6, alpha-beta domain (InterPro:IPR020040), Ribosomal protein L6, conserved site (InterPro:IPR002358); BEST Arabidopsis thaliana protein match is: ribosomal protein L6 family protein (TAIR:AT2G18400.1); Has 8498 Blast hits to 8498 proteins in 2848 species: Archae - 226; Bacteria - 5468; Metazoa - 15; Fungi - 189; Plants - 125; Viruses - 0; Other Eukaryotes - 2475 (source: NCBI BLink). & (gnl|cdd|81626 : 241.0) no description available & (gnl|cdd|38464 : 227.0) no description available & (p46748|rm06_prowi : 93.2) Mitochondrial 60S ribosomal protein L6 - Prototheca wickerhamii & (reliability: 654.0) & (original description: Putative RPL6, Description = 50S ribosomal protein L6, chloroplastic, PFAM = PF00347;PF00347)' T '29.2.1.1.1.2.9' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L9' 'niben101scf00436_670045-675233' '(at3g44890 : 215.0) Plastid ribosomal protein CL9; ribosomal protein L9 (RPL9); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, plastid large ribosomal subunit, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9 (InterPro:IPR000244), Ribosomal protein L9, bacteria/chloroplast (InterPro:IPR020594), Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Ribosomal protein L9, N-terminal (InterPro:IPR020070), Ribosomal protein L9, C-terminal (InterPro:IPR020069); Has 7269 Blast hits to 7269 proteins in 2533 species: Archae - 0; Bacteria - 5393; Metazoa - 2; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 1796 (source: NCBI BLink). & (q8l803|rk9_wheat : 202.0) 50S ribosomal protein L9, chloroplast precursor (CL9) - Triticum aestivum (Wheat) & (gnl|cdd|39807 : 145.0) no description available & (gnl|cdd|80541 : 113.0) no description available & (reliability: 430.0) & (original description: Putative RPL9, Description = 50S ribosomal protein L9, chloroplastic, PFAM = PF01281;PF03948)' T '29.2.1.1.1.2.9' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L9' 'niben101scf06799_75736-81083' '(at3g44890 : 207.0) Plastid ribosomal protein CL9; ribosomal protein L9 (RPL9); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, plastid large ribosomal subunit, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9 (InterPro:IPR000244), Ribosomal protein L9, bacteria/chloroplast (InterPro:IPR020594), Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Ribosomal protein L9, N-terminal (InterPro:IPR020070), Ribosomal protein L9, C-terminal (InterPro:IPR020069); Has 7269 Blast hits to 7269 proteins in 2533 species: Archae - 0; Bacteria - 5393; Metazoa - 2; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 1796 (source: NCBI BLink). & (q8l803|rk9_wheat : 199.0) 50S ribosomal protein L9, chloroplast precursor (CL9) - Triticum aestivum (Wheat) & (gnl|cdd|39807 : 144.0) no description available & (gnl|cdd|80541 : 113.0) no description available & (reliability: 414.0) & (original description: Putative RPL9, Description = 50S ribosomal protein L9, chloroplastic, PFAM = PF03948;PF01281)' T '29.2.1.1.1.2.10' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L10' 'niben101scf01818_205372-208052' '(o80362|rk10_tobac : 417.0) 50S ribosomal protein L10, chloroplast precursor (CL10) - Nicotiana tabacum (Common tobacco) & (at5g13510 : 275.0) Ribosomal protein L10 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L10 (InterPro:IPR001790); BEST Arabidopsis thaliana protein match is: Ribosomal protein L10 family protein (TAIR:AT3G12370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80511 : 132.0) no description available & (reliability: 550.0) & (original description: Putative RPL10, Description = 50S ribosomal protein L10, chloroplastic, PFAM = PF00466)' T '29.2.1.1.1.2.10' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L10' 'niben101scf06291_350694-353509' '(o80362|rk10_tobac : 416.0) 50S ribosomal protein L10, chloroplast precursor (CL10) - Nicotiana tabacum (Common tobacco) & (at5g13510 : 275.0) Ribosomal protein L10 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L10 (InterPro:IPR001790); BEST Arabidopsis thaliana protein match is: Ribosomal protein L10 family protein (TAIR:AT3G12370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80511 : 134.0) no description available & (reliability: 550.0) & (original description: Putative RPL10, Description = 50S ribosomal protein L10, chloroplastic, PFAM = PF00466)' T '29.2.1.1.1.2.11' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L11' 'nbv0.3scaffold29001_22810-25295' '(at4g35490 : 209.0) mitochondrial ribosomal protein L11 (MRPL11); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic large ribosomal subunit, ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11, C-terminal domain (InterPro:IPR020783), Ribosomal protein L11, bacterial-type (InterPro:IPR006519), Ribosomal protein L11, N-terminal domain (InterPro:IPR020784), Ribosomal protein L11 (InterPro:IPR000911); BEST Arabidopsis thaliana protein match is: plastid ribosomal protein l11 (TAIR:AT1G32990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38467 : 197.0) no description available & (gnl|cdd|47926 : 160.0) no description available & (reliability: 418.0) & (original description: Putative mrpl19, Description = 54S ribosomal protein L19, mitochondrial, PFAM = PF03946;PF00298)' T '29.2.1.1.1.2.11' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L11' 'niben044scf00016479ctg005_345-2942' '(at4g35490 : 209.0) mitochondrial ribosomal protein L11 (MRPL11); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic large ribosomal subunit, ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11, C-terminal domain (InterPro:IPR020783), Ribosomal protein L11, bacterial-type (InterPro:IPR006519), Ribosomal protein L11, N-terminal domain (InterPro:IPR020784), Ribosomal protein L11 (InterPro:IPR000911); BEST Arabidopsis thaliana protein match is: plastid ribosomal protein l11 (TAIR:AT1G32990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38467 : 197.0) no description available & (gnl|cdd|47926 : 160.0) no description available & (reliability: 418.0) & (original description: Putative mrpl19, Description = 54S ribosomal protein L19, mitochondrial, PFAM = PF03946;PF00298)' T '29.2.1.1.1.2.11' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L11' 'niben101scf00381_841020-843505' '(at4g35490 : 211.0) mitochondrial ribosomal protein L11 (MRPL11); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic large ribosomal subunit, ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11, C-terminal domain (InterPro:IPR020783), Ribosomal protein L11, bacterial-type (InterPro:IPR006519), Ribosomal protein L11, N-terminal domain (InterPro:IPR020784), Ribosomal protein L11 (InterPro:IPR000911); BEST Arabidopsis thaliana protein match is: plastid ribosomal protein l11 (TAIR:AT1G32990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38467 : 200.0) no description available & (gnl|cdd|47926 : 163.0) no description available & (reliability: 422.0) & (original description: Putative mrpl19, Description = 54S ribosomal protein L19, mitochondrial, PFAM = PF03946;PF00298)' T '29.2.1.1.1.2.11' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L11' 'niben101scf07036_280526-285546' '(at1g32990 : 263.0) mutant has Decreased effective quantum yield of photosystem II; Pale green plants; Reduced growth rate; Plastid Ribosomal Protein L11; plastid ribosomal protein l11 (PRPL11); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11, C-terminal domain (InterPro:IPR020783), Ribosomal protein L11, bacterial-type (InterPro:IPR006519), Ribosomal protein L11, N-terminal domain (InterPro:IPR020784), Ribosomal protein L11, conserved site (InterPro:IPR020785), Ribosomal protein L11 (InterPro:IPR000911); BEST Arabidopsis thaliana protein match is: Ribosomal protein L11 family protein (TAIR:AT5G51610.1); Has 8526 Blast hits to 8526 proteins in 2812 species: Archae - 305; Bacteria - 5419; Metazoa - 123; Fungi - 122; Plants - 106; Viruses - 0; Other Eukaryotes - 2451 (source: NCBI BLink). & (p31164|rk11_spiol : 250.0) 50S ribosomal protein L11, chloroplast precursor (CL11) - Spinacia oleracea (Spinach) & (gnl|cdd|80543 : 223.0) no description available & (gnl|cdd|38467 : 178.0) no description available & (reliability: 526.0) & (original description: Putative RPL11, Description = 50S ribosomal protein L11, chloroplastic, PFAM = PF03946;PF00298)' T '29.2.1.1.1.2.12' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L12' 'nbv0.3scaffold70830_7009-9112' '(at1g70190 : 186.0) Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, oligomerisation (InterPro:IPR008932), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: Ribosomal protein L12 family protein (TAIR:AT4G36420.1). & (gnl|cdd|36927 : 150.0) no description available & (gnl|cdd|80553 : 90.6) no description available & (reliability: 372.0) & (original description: Putative PRPL12, Description = PRPL12 Chloroplast ribosomal protein L12, PFAM = PF00542;PF16320)' T '29.2.1.1.1.2.12' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L12' 'nbv0.3scaffold72418_1818-4375' '(p36688|rk12_nicsy : 223.0) 50S ribosomal protein L12, chloroplast precursor (CL12) - Nicotiana sylvestris (Wood tobacco) & (at3g27830 : 154.0) 50S ribosomal protein L12-A; ribosomal protein L12-A (RPL12-A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: cotyledon, juvenile leaf, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7/L12 (InterPro:IPR000206), Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, oligomerisation (InterPro:IPR008932), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: ribosomal protein L12-C (TAIR:AT3G27850.1); Has 8536 Blast hits to 8536 proteins in 2747 species: Archae - 0; Bacteria - 5673; Metazoa - 193; Fungi - 128; Plants - 248; Viruses - 0; Other Eukaryotes - 2294 (source: NCBI BLink). & (gnl|cdd|36927 : 128.0) no description available & (gnl|cdd|79300 : 121.0) no description available & (reliability: 308.0) & (original description: Putative RPL12, Description = 50S ribosomal protein L12, chloroplastic, PFAM = PF16320;PF00542)' T '29.2.1.1.1.2.12' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L12' 'niben044scf00050091ctg005_23671-26252' '(gnl|cdd|36927 : 140.0) no description available & (at3g06040 : 137.0) Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (TAIR:AT1G70190.2); Has 8332 Blast hits to 8332 proteins in 2728 species: Archae - 0; Bacteria - 5601; Metazoa - 194; Fungi - 132; Plants - 253; Viruses - 0; Other Eukaryotes - 2152 (source: NCBI BLink). & (gnl|cdd|80553 : 83.2) no description available & (reliability: 274.0) & (original description: Putative rplL, Description = 50S ribosomal protein L7/L12, PFAM = PF00542)' T '29.2.1.1.1.2.12' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L12' 'niben101scf01676_63715-66326' '(gnl|cdd|36927 : 147.0) no description available & (gnl|cdd|80553 : 101.0) no description available & (at1g70190 : 87.8) Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, oligomerisation (InterPro:IPR008932), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: Ribosomal protein L12 family protein (TAIR:AT4G36420.1). & (reliability: 175.6) & (original description: Putative BnaC07g51160D, Description = BnaC07g51160D protein, PFAM = PF16320;PF00542)' T '29.2.1.1.1.2.12' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L12' 'niben101scf01695_653899-656543' '(at1g70190 : 186.0) Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, oligomerisation (InterPro:IPR008932), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: Ribosomal protein L12 family protein (TAIR:AT4G36420.1). & (gnl|cdd|36927 : 152.0) no description available & (gnl|cdd|80553 : 91.3) no description available & (reliability: 372.0) & (original description: Putative PRPL12, Description = PRPL12 Chloroplast ribosomal protein L12, PFAM = PF16320;PF00542)' T '29.2.1.1.1.2.12' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L12' 'niben101scf01912_150303-152860' '(p36688|rk12_nicsy : 176.0) 50S ribosomal protein L12, chloroplast precursor (CL12) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|79300 : 121.0) no description available & (gnl|cdd|36927 : 119.0) no description available & (at3g27830 : 116.0) 50S ribosomal protein L12-A; ribosomal protein L12-A (RPL12-A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: cotyledon, juvenile leaf, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7/L12 (InterPro:IPR000206), Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, oligomerisation (InterPro:IPR008932), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: ribosomal protein L12-C (TAIR:AT3G27850.1); Has 8536 Blast hits to 8536 proteins in 2747 species: Archae - 0; Bacteria - 5673; Metazoa - 193; Fungi - 128; Plants - 248; Viruses - 0; Other Eukaryotes - 2294 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative RPL12, Description = 50S ribosomal protein L12, chloroplastic, PFAM = PF16320;PF00542)' T '29.2.1.1.1.2.12' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L12' 'niben101scf04633_238077-240634' '(p36688|rk12_nicsy : 197.0) 50S ribosomal protein L12, chloroplast precursor (CL12) - Nicotiana sylvestris (Wood tobacco) & (at3g27830 : 139.0) 50S ribosomal protein L12-A; ribosomal protein L12-A (RPL12-A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: cotyledon, juvenile leaf, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7/L12 (InterPro:IPR000206), Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, oligomerisation (InterPro:IPR008932), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: ribosomal protein L12-C (TAIR:AT3G27850.1); Has 8536 Blast hits to 8536 proteins in 2747 species: Archae - 0; Bacteria - 5673; Metazoa - 193; Fungi - 128; Plants - 248; Viruses - 0; Other Eukaryotes - 2294 (source: NCBI BLink). & (gnl|cdd|79300 : 119.0) no description available & (gnl|cdd|36927 : 116.0) no description available & (reliability: 278.0) & (original description: Putative rplL, Description = 50S ribosomal protein L7/L12, PFAM = PF16320;PF00542)' T '29.2.1.1.1.2.12' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L12' 'niben101scf05764_288484-291095' '(gnl|cdd|36927 : 147.0) no description available & (gnl|cdd|80553 : 102.0) no description available & (at1g70190 : 89.7) Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, oligomerisation (InterPro:IPR008932), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: Ribosomal protein L12 family protein (TAIR:AT4G36420.1). & (reliability: 179.4) & (original description: Putative BnaC07g51160D, Description = BnaC07g51160D protein, PFAM = PF00542;PF16320)' T '29.2.1.1.1.2.12' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L12' 'niben101scf06349_262478-273759' '(p24929|rk12_tobac : 211.0) 50S ribosomal protein L12, chloroplast precursor (CL12) - Nicotiana tabacum (Common tobacco) & (at3g27850 : 155.0) 50S ribosomal protein L12-C; ribosomal protein L12-C (RPL12-C); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: defense response to bacterium, translation; LOCATED IN: in 6 components; EXPRESSED IN: juvenile leaf, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7/L12 (InterPro:IPR000206), Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, oligomerisation (InterPro:IPR008932), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: ribosomal protein L12-A (TAIR:AT3G27830.1); Has 8543 Blast hits to 8543 proteins in 2749 species: Archae - 0; Bacteria - 5675; Metazoa - 193; Fungi - 132; Plants - 248; Viruses - 0; Other Eukaryotes - 2295 (source: NCBI BLink). & (gnl|cdd|36927 : 125.0) no description available & (gnl|cdd|79300 : 124.0) no description available & (reliability: 310.0) & (original description: Putative RPL12, Description = 50S ribosomal protein L12, chloroplastic, PFAM = PF16320;PF00542)' T '29.2.1.1.1.2.12' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L12' 'niben101scf12662_53262-55852' '(gnl|cdd|36927 : 139.0) no description available & (at3g06040 : 131.0) Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (TAIR:AT1G70190.2); Has 8332 Blast hits to 8332 proteins in 2728 species: Archae - 0; Bacteria - 5601; Metazoa - 194; Fungi - 132; Plants - 253; Viruses - 0; Other Eukaryotes - 2152 (source: NCBI BLink). & (gnl|cdd|80553 : 82.5) no description available & (reliability: 262.0) & (original description: Putative rplL, Description = 50S ribosomal protein L7/L12, PFAM = PF00542)' T '29.2.1.1.1.2.12' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L12' 'niben101scf13856_49147-51728' '(gnl|cdd|36927 : 142.0) no description available & (at3g06040 : 132.0) Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (TAIR:AT1G70190.2); Has 8332 Blast hits to 8332 proteins in 2728 species: Archae - 0; Bacteria - 5601; Metazoa - 194; Fungi - 132; Plants - 253; Viruses - 0; Other Eukaryotes - 2152 (source: NCBI BLink). & (gnl|cdd|80553 : 81.3) no description available & (reliability: 264.0) & (original description: Putative rplL, Description = 50S ribosomal protein L7/L12, PFAM = PF00542)' T '29.2.1.1.1.2.13' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L13' 'niben101scf04528_506753-511720' '(at1g78630 : 341.0) embryo defective 1473 (emb1473); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: thylakoid, ribosome, chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13, bacterial-type (InterPro:IPR005823), Ribosomal protein L13 (InterPro:IPR005822); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT3G01790.2); Has 8725 Blast hits to 8725 proteins in 2839 species: Archae - 248; Bacteria - 5258; Metazoa - 358; Fungi - 293; Plants - 251; Viruses - 0; Other Eukaryotes - 2317 (source: NCBI BLink). & (p12629|rk13_spiol : 304.0) 50S ribosomal protein L13, chloroplast precursor (CL13) - Spinacia oleracea (Spinach) & (gnl|cdd|82862 : 220.0) no description available & (gnl|cdd|38413 : 183.0) no description available & (reliability: 682.0) & (original description: Putative rplM, Description = 50S ribosomal protein L13, PFAM = PF00572)' T '29.2.1.1.1.2.13' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L13' 'niben101scf06437_169556-174635' '(at1g78630 : 338.0) embryo defective 1473 (emb1473); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: thylakoid, ribosome, chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13, bacterial-type (InterPro:IPR005823), Ribosomal protein L13 (InterPro:IPR005822); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT3G01790.2); Has 8725 Blast hits to 8725 proteins in 2839 species: Archae - 248; Bacteria - 5258; Metazoa - 358; Fungi - 293; Plants - 251; Viruses - 0; Other Eukaryotes - 2317 (source: NCBI BLink). & (p12629|rk13_spiol : 304.0) 50S ribosomal protein L13, chloroplast precursor (CL13) - Spinacia oleracea (Spinach) & (gnl|cdd|82862 : 221.0) no description available & (gnl|cdd|38413 : 182.0) no description available & (reliability: 676.0) & (original description: Putative RPL13, Description = 50S ribosomal protein L13, chloroplastic, PFAM = PF00572)' T '29.2.1.1.1.2.14' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L14' 'nbv0.5scaffold4427_261197-261711' '(p06382|rk14_tobac : 224.0) Chloroplast 50S ribosomal protein L14 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79274 : 224.0) no description available & (atcg00780 : 213.0) encodes a chloroplast ribosomal protein L14, a constituent of the large subunit of the ribosomal complex; ribosomal protein L14 (RPL14); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14, bacterial-type (InterPro:IPR005745), Ribosomal protein L14b/L23e (InterPro:IPR000218), Ribosomal protein L14 conserved site (InterPro:IPR019972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14p/L23e family protein (TAIR:AT5G46160.2). & (gnl|cdd|36119 : 124.0) no description available & (reliability: 426.0) & (original description: Putative rpl14, Description = 50S ribosomal protein L14, chloroplastic, PFAM = PF00238)' T '29.2.1.1.1.2.14' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L14' 'niben101scf00568_496740-498186' '(p06382|rk14_tobac : 210.0) Chloroplast 50S ribosomal protein L14 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79274 : 205.0) no description available & (atcg00780 : 200.0) encodes a chloroplast ribosomal protein L14, a constituent of the large subunit of the ribosomal complex; ribosomal protein L14 (RPL14); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14, bacterial-type (InterPro:IPR005745), Ribosomal protein L14b/L23e (InterPro:IPR000218), Ribosomal protein L14 conserved site (InterPro:IPR019972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14p/L23e family protein (TAIR:AT5G46160.2). & (gnl|cdd|36119 : 117.0) no description available & (reliability: 400.0) & (original description: Putative rpl14, Description = 50S ribosomal protein L14, chloroplastic, PFAM = PF00238)' T '29.2.1.1.1.2.14' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L14' 'niben101scf06211_150954-154209' '(gnl|cdd|79262 : 168.0) no description available & (p06384|rk16_tobac : 162.0) Chloroplast 50S ribosomal protein L16 - Nicotiana tabacum (Common tobacco) & (atcg00790 : 149.0) chloroplast gene encoding a ribosomal protein L16, which is a constituent of 50S large ribosomal subunit; ribosomal protein L16 (RPL16); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L16 (InterPro:IPR000114), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L16, conserved site (InterPro:IPR020798); BEST Arabidopsis thaliana protein match is: PLANT U-BOX 12 (TAIR:AT2G28830.1). & (gnl|cdd|38632 : 101.0) no description available & (reliability: 276.0) & (original description: Putative rplP, Description = 50S ribosomal protein L16, PFAM = PF00238;PF00252)' T '29.2.1.1.1.2.15' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L15' 'niben101scf03056_274515-281455' '(p31165|rk15_pea : 273.0) 50S ribosomal protein L15, chloroplast precursor (CL15) (Fragment) - Pisum sativum (Garden pea) & (at3g25920 : 267.0) encodes a plastid ribosomal protein CL15, a constituent of the large subunit of the ribosomal complex; ribosomal protein L15 (RPL15); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L15, bacterial-type (InterPro:IPR005749), Ribosomal protein L15, conserved site (InterPro:IPR001196); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18e/L15 superfamily protein (TAIR:AT5G64670.1); Has 7744 Blast hits to 7744 proteins in 2658 species: Archae - 15; Bacteria - 5386; Metazoa - 72; Fungi - 86; Plants - 90; Viruses - 0; Other Eukaryotes - 2095 (source: NCBI BLink). & (gnl|cdd|36064 : 162.0) no description available & (gnl|cdd|81651 : 153.0) no description available & (reliability: 534.0) & (original description: Putative RPL15, Description = 50S ribosomal protein L15, chloroplastic, PFAM = PF00828)' T '29.2.1.1.1.2.15' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L15' 'niben101scf15308_40318-48922' '(p31165|rk15_pea : 282.0) 50S ribosomal protein L15, chloroplast precursor (CL15) (Fragment) - Pisum sativum (Garden pea) & (at3g25920 : 280.0) encodes a plastid ribosomal protein CL15, a constituent of the large subunit of the ribosomal complex; ribosomal protein L15 (RPL15); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L15, bacterial-type (InterPro:IPR005749), Ribosomal protein L15, conserved site (InterPro:IPR001196); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18e/L15 superfamily protein (TAIR:AT5G64670.1); Has 7744 Blast hits to 7744 proteins in 2658 species: Archae - 15; Bacteria - 5386; Metazoa - 72; Fungi - 86; Plants - 90; Viruses - 0; Other Eukaryotes - 2095 (source: NCBI BLink). & (gnl|cdd|36064 : 163.0) no description available & (gnl|cdd|81651 : 156.0) no description available & (reliability: 560.0) & (original description: Putative RPL15, Description = 50S ribosomal protein L15, chloroplastic, PFAM = PF00828)' T '29.2.1.1.1.2.16' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L16' 'nbv0.3scaffold127012_1-1795' '(gnl|cdd|79262 : 225.0) no description available & (p06384|rk16_tobac : 221.0) Chloroplast 50S ribosomal protein L16 - Nicotiana tabacum (Common tobacco) & (atcg00790 : 205.0) chloroplast gene encoding a ribosomal protein L16, which is a constituent of 50S large ribosomal subunit; ribosomal protein L16 (RPL16); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L16 (InterPro:IPR000114), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L16, conserved site (InterPro:IPR020798); BEST Arabidopsis thaliana protein match is: PLANT U-BOX 12 (TAIR:AT2G28830.1). & (gnl|cdd|38632 : 149.0) no description available & (reliability: 410.0) & (original description: Putative rpl16, Description = 50S ribosomal protein L16, chloroplastic, PFAM = PF00252)' T '29.2.1.1.1.2.16' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L16' 'nbv0.5scaffold4427_261712-263168' '(gnl|cdd|79262 : 236.0) no description available & (p06384|rk16_tobac : 229.0) Chloroplast 50S ribosomal protein L16 - Nicotiana tabacum (Common tobacco) & (atcg00790 : 213.0) chloroplast gene encoding a ribosomal protein L16, which is a constituent of 50S large ribosomal subunit; ribosomal protein L16 (RPL16); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L16 (InterPro:IPR000114), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L16, conserved site (InterPro:IPR020798); BEST Arabidopsis thaliana protein match is: PLANT U-BOX 12 (TAIR:AT2G28830.1). & (gnl|cdd|38632 : 150.0) no description available & (reliability: 426.0) & (original description: Putative rpl16, Description = 50S ribosomal protein L16, chloroplastic, PFAM = PF00252)' T '29.2.1.1.1.2.16' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L16' 'niben044scf00007712ctg005_20287-22677' '(gnl|cdd|79262 : 186.0) no description available & (p06384|rk16_tobac : 184.0) Chloroplast 50S ribosomal protein L16 - Nicotiana tabacum (Common tobacco) & (atcg00790 : 171.0) chloroplast gene encoding a ribosomal protein L16, which is a constituent of 50S large ribosomal subunit; ribosomal protein L16 (RPL16); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L16 (InterPro:IPR000114), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L16, conserved site (InterPro:IPR020798); BEST Arabidopsis thaliana protein match is: PLANT U-BOX 12 (TAIR:AT2G28830.1). & (gnl|cdd|38632 : 114.0) no description available & (reliability: 342.0) & (original description: Putative rpl16, Description = 50S ribosomal protein L16, chloroplastic, PFAM = PF00252)' T '29.2.1.1.1.2.16' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L16' 'niben101scf06211_150954-154209' '(gnl|cdd|79262 : 168.0) no description available & (p06384|rk16_tobac : 162.0) Chloroplast 50S ribosomal protein L16 - Nicotiana tabacum (Common tobacco) & (atcg00790 : 149.0) chloroplast gene encoding a ribosomal protein L16, which is a constituent of 50S large ribosomal subunit; ribosomal protein L16 (RPL16); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L16 (InterPro:IPR000114), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L16, conserved site (InterPro:IPR020798); BEST Arabidopsis thaliana protein match is: PLANT U-BOX 12 (TAIR:AT2G28830.1). & (gnl|cdd|38632 : 101.0) no description available & (reliability: 298.0) & (original description: Putative rplP, Description = 50S ribosomal protein L16, PFAM = PF00238;PF00252)' T '29.2.1.1.1.2.16' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L16' 'niben101scf22792_321-1867' '(gnl|cdd|79262 : 235.0) no description available & (q8s8v6|rk16_atrbe : 224.0) Chloroplast 50S ribosomal protein L16 - Atropa belladonna (Belladonna) (Deadly nightshade) & (atcg00790 : 212.0) chloroplast gene encoding a ribosomal protein L16, which is a constituent of 50S large ribosomal subunit; ribosomal protein L16 (RPL16); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L16 (InterPro:IPR000114), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L16, conserved site (InterPro:IPR020798); BEST Arabidopsis thaliana protein match is: PLANT U-BOX 12 (TAIR:AT2G28830.1). & (gnl|cdd|38632 : 150.0) no description available & (reliability: 424.0) & (original description: Putative rpl16, Description = 50S ribosomal protein L16, chloroplastic, PFAM = PF00252)' T '29.2.1.1.1.2.17' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L17' 'niben101scf00262_242969-247711' '(o80363|rk17_tobac : 276.0) 50S ribosomal protein L17, chloroplast precursor (CL17) - Nicotiana tabacum (Common tobacco) & (at3g54210 : 236.0) Ribosomal protein L17 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L17 (InterPro:IPR000456); BEST Arabidopsis thaliana protein match is: Ribosomal protein L17 family protein (TAIR:AT5G09770.1); Has 8019 Blast hits to 8019 proteins in 2737 species: Archae - 0; Bacteria - 5501; Metazoa - 121; Fungi - 128; Plants - 120; Viruses - 0; Other Eukaryotes - 2149 (source: NCBI BLink). & (gnl|cdd|81650 : 181.0) no description available & (gnl|cdd|38490 : 160.0) no description available & (reliability: 472.0) & (original description: Putative RPL17, Description = 50S ribosomal protein L17, chloroplastic, PFAM = PF01196)' T '29.2.1.1.1.2.17' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L17' 'niben101scf02320_117813-122448' '(o80363|rk17_tobac : 343.0) 50S ribosomal protein L17, chloroplast precursor (CL17) - Nicotiana tabacum (Common tobacco) & (at3g54210 : 255.0) Ribosomal protein L17 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L17 (InterPro:IPR000456); BEST Arabidopsis thaliana protein match is: Ribosomal protein L17 family protein (TAIR:AT5G09770.1); Has 8019 Blast hits to 8019 proteins in 2737 species: Archae - 0; Bacteria - 5501; Metazoa - 121; Fungi - 128; Plants - 120; Viruses - 0; Other Eukaryotes - 2149 (source: NCBI BLink). & (gnl|cdd|81650 : 181.0) no description available & (gnl|cdd|38490 : 157.0) no description available & (reliability: 510.0) & (original description: Putative RPL17, Description = 50S ribosomal protein L17, chloroplastic, PFAM = PF01196)' T '29.2.1.1.1.2.17' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L17' 'niben101scf17834_21435-25789' '(o80363|rk17_tobac : 308.0) 50S ribosomal protein L17, chloroplast precursor (CL17) - Nicotiana tabacum (Common tobacco) & (at3g54210 : 258.0) Ribosomal protein L17 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L17 (InterPro:IPR000456); BEST Arabidopsis thaliana protein match is: Ribosomal protein L17 family protein (TAIR:AT5G09770.1); Has 8019 Blast hits to 8019 proteins in 2737 species: Archae - 0; Bacteria - 5501; Metazoa - 121; Fungi - 128; Plants - 120; Viruses - 0; Other Eukaryotes - 2149 (source: NCBI BLink). & (gnl|cdd|81650 : 179.0) no description available & (gnl|cdd|38490 : 155.0) no description available & (reliability: 516.0) & (original description: Putative RPL17, Description = 50S ribosomal protein L17, chloroplastic, PFAM = PF01196)' T '29.2.1.1.1.2.18' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L18' 'nbv0.5scaffold6380_58298-64361' '(at1g48350 : 189.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484), Ribosomal protein L18, bacterial (InterPro:IPR004389); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT1G14205.1); Has 7344 Blast hits to 7344 proteins in 2490 species: Archae - 0; Bacteria - 5225; Metazoa - 1; Fungi - 0; Plants - 115; Viruses - 0; Other Eukaryotes - 2003 (source: NCBI BLink). & (gnl|cdd|81652 : 156.0) no description available & (q8say0|rk18_orysa : 149.0) 50S ribosomal protein L18, chloroplast precursor (CL18) - Oryza sativa (Rice) & (reliability: 378.0) & (original description: Putative rplR, Description = 50S ribosomal protein L18, PFAM = PF00861)' T '29.2.1.1.1.2.18' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L18' 'niben101scf01066_637032-643083' '(at1g48350 : 212.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484), Ribosomal protein L18, bacterial (InterPro:IPR004389); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT1G14205.1); Has 7344 Blast hits to 7344 proteins in 2490 species: Archae - 0; Bacteria - 5225; Metazoa - 1; Fungi - 0; Plants - 115; Viruses - 0; Other Eukaryotes - 2003 (source: NCBI BLink). & (q8say0|rk18_orysa : 171.0) 50S ribosomal protein L18, chloroplast precursor (CL18) - Oryza sativa (Rice) & (gnl|cdd|81652 : 162.0) no description available & (reliability: 424.0) & (original description: Putative RPL18, Description = 50S ribosomal protein L18, chloroplastic, PFAM = PF00861)' T '29.2.1.1.1.2.18' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L18' 'niben101scf14374_12182-18031' '(at1g48350 : 213.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484), Ribosomal protein L18, bacterial (InterPro:IPR004389); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT1G14205.1); Has 7344 Blast hits to 7344 proteins in 2490 species: Archae - 0; Bacteria - 5225; Metazoa - 1; Fungi - 0; Plants - 115; Viruses - 0; Other Eukaryotes - 2003 (source: NCBI BLink). & (q8say0|rk18_orysa : 171.0) 50S ribosomal protein L18, chloroplast precursor (CL18) - Oryza sativa (Rice) & (gnl|cdd|81652 : 163.0) no description available & (reliability: 426.0) & (original description: Putative RPL18, Description = 50S ribosomal protein L18, chloroplastic, PFAM = PF00861)' T '29.2.1.1.1.2.19' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L19' 'nbv0.5scaffold394_246149-251238' '(at4g17560 : 167.0) Ribosomal protein L19 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast stroma, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19 (InterPro:IPR001857); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19 family protein (TAIR:AT5G47190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36911 : 153.0) no description available & (p82413|rk19_spiol : 146.0) 50S ribosomal protein L19, chloroplast precursor (CL19) - Spinacia oleracea (Spinach) & (gnl|cdd|81533 : 106.0) no description available & (reliability: 334.0) & (original description: Putative RPL19, Description = 50S ribosomal protein L19, chloroplastic, PFAM = PF01245)' T '29.2.1.1.1.2.19' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L19' 'niben044scf00032684ctg001_4476-9305' '(at4g17560 : 176.0) Ribosomal protein L19 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast stroma, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19 (InterPro:IPR001857); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19 family protein (TAIR:AT5G47190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p82413|rk19_spiol : 155.0) 50S ribosomal protein L19, chloroplast precursor (CL19) - Spinacia oleracea (Spinach) & (gnl|cdd|36911 : 151.0) no description available & (gnl|cdd|81533 : 105.0) no description available & (reliability: 352.0) & (original description: Putative RPL19, Description = 50S ribosomal protein L19, chloroplastic, PFAM = PF01245)' T '29.2.1.1.1.2.19' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L19' 'niben101scf00428_1533573-1538662' '(at4g17560 : 164.0) Ribosomal protein L19 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast stroma, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19 (InterPro:IPR001857); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19 family protein (TAIR:AT5G47190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36911 : 150.0) no description available & (p82413|rk19_spiol : 146.0) 50S ribosomal protein L19, chloroplast precursor (CL19) - Spinacia oleracea (Spinach) & (gnl|cdd|81533 : 106.0) no description available & (reliability: 328.0) & (original description: Putative rplS, Description = 50S ribosomal protein L19, chloroplastic, PFAM = PF01245)' T '29.2.1.1.1.2.19' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L19' 'niben101scf00574_1113943-1122636' '(at4g11630 : 208.0) Ribosomal protein L19 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19 (InterPro:IPR001857); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19 family protein (TAIR:AT5G11750.1); Has 7944 Blast hits to 7944 proteins in 2668 species: Archae - 0; Bacteria - 5364; Metazoa - 112; Fungi - 56; Plants - 151; Viruses - 0; Other Eukaryotes - 2261 (source: NCBI BLink). & (gnl|cdd|36911 : 155.0) no description available & (p82413|rk19_spiol : 128.0) 50S ribosomal protein L19, chloroplast precursor (CL19) - Spinacia oleracea (Spinach) & (gnl|cdd|81533 : 105.0) no description available & (reliability: 406.0) & (original description: Putative rplS, Description = 50S ribosomal protein L19, PFAM = PF01245)' T '29.2.1.1.1.2.20' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L20' 'nbv0.3scaffold81277_1-1461' '(q68ry3|rk20_pangi : 143.0) Chloroplast 50S ribosomal protein L20 - Panax ginseng (Korean ginseng) & (gnl|cdd|79285 : 134.0) no description available & (atcg00660 : 112.0) encodes a chloroplast ribosomal protein L20, a constituent of the large subunit of the ribosomal complex; ribosomal protein L20 (RPL20); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L20 (InterPro:IPR005813); BEST Arabidopsis thaliana protein match is: Ribosomal protein L20 (TAIR:AT1G16740.1). & (gnl|cdd|39905 : 89.2) no description available & (reliability: 224.0) & (original description: Putative rpl20, Description = 50S ribosomal protein L20, chloroplastic, PFAM = PF00453)' T '29.2.1.1.1.2.20' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L20' 'niben101scf08684_450489-452012' '(q7fns5|rk20_atrbe : 150.0) Chloroplast 50S ribosomal protein L20 - Atropa belladonna (Belladonna) (Deadly nightshade) & (gnl|cdd|79285 : 146.0) no description available & (atcg00660 : 111.0) encodes a chloroplast ribosomal protein L20, a constituent of the large subunit of the ribosomal complex; ribosomal protein L20 (RPL20); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L20 (InterPro:IPR005813); BEST Arabidopsis thaliana protein match is: Ribosomal protein L20 (TAIR:AT1G16740.1). & (gnl|cdd|39905 : 103.0) no description available & (reliability: 222.0) & (original description: Putative rpl20, Description = 50S ribosomal protein L20, chloroplastic, PFAM = PF00453)' T '29.2.1.1.1.2.21' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L21' 'niben044scf00027671ctg004_1-3627' '(p24613|rk21_spiol : 144.0) 50S ribosomal protein L21, chloroplast precursor (CL21) (CS-L7) - Spinacia oleracea (Spinach) & (at1g35680 : 139.0) Ribosomal protein L21; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: response to cold, translation; LOCATED IN: ribosome, chloroplast stroma, nucleus, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L21, conserved site (InterPro:IPR018258), Ribosomal protein L21 (InterPro:IPR001787); BEST Arabidopsis thaliana protein match is: Ribosomal protein L21 (TAIR:AT4G30930.1); Has 7103 Blast hits to 7101 proteins in 2544 species: Archae - 0; Bacteria - 5138; Metazoa - 96; Fungi - 4; Plants - 134; Viruses - 0; Other Eukaryotes - 1731 (source: NCBI BLink). & (gnl|cdd|36899 : 124.0) no description available & (gnl|cdd|85055 : 100.0) no description available & (reliability: 278.0) & (original description: Putative rplU, Description = 50S ribosomal protein L21, PFAM = PF00829)' T '29.2.1.1.1.2.21' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L21' 'niben044scf00048542ctg000_7329-11694' '(gnl|cdd|36899 : 139.0) no description available & (at4g30930 : 133.0) Encodes a ribosomal RPL21M protein that is localized to the mitochondrion and is involved in karyogamy during female gametophyte development and fertilization. Mutants display defects in both male and female gametophyte development (i.e.collapsed pollen and female gametophytes with unfused central cells).; NUCLEAR FUSION DEFECTIVE 1 (NFD1); FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, karyogamy, embryo sac development, double fertilization forming a zygote and endosperm, pollen development; LOCATED IN: mitochondrion, ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L21, conserved site (InterPro:IPR018258), Ribosomal protein L21 (InterPro:IPR001787); BEST Arabidopsis thaliana protein match is: Ribosomal protein L21 (TAIR:AT1G35680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85055 : 101.0) no description available & (reliability: 266.0) & (original description: Putative NFD1, Description = 50S ribosomal protein L21, mitochondrial, PFAM = PF00829)' T '29.2.1.1.1.2.21' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L21' 'niben101scf00016_470787-477169' '(at1g35680 : 156.0) Ribosomal protein L21; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: response to cold, translation; LOCATED IN: ribosome, chloroplast stroma, nucleus, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L21, conserved site (InterPro:IPR018258), Ribosomal protein L21 (InterPro:IPR001787); BEST Arabidopsis thaliana protein match is: Ribosomal protein L21 (TAIR:AT4G30930.1); Has 7103 Blast hits to 7101 proteins in 2544 species: Archae - 0; Bacteria - 5138; Metazoa - 96; Fungi - 4; Plants - 134; Viruses - 0; Other Eukaryotes - 1731 (source: NCBI BLink). & (p24613|rk21_spiol : 154.0) 50S ribosomal protein L21, chloroplast precursor (CL21) (CS-L7) - Spinacia oleracea (Spinach) & (gnl|cdd|36899 : 138.0) no description available & (gnl|cdd|85055 : 122.0) no description available & (reliability: 312.0) & (original description: Putative RPL21, Description = 50S ribosomal protein L21, chloroplastic, PFAM = PF00829)' T '29.2.1.1.1.2.21' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L21' 'niben101scf01015_149400-159520' '(at4g30930 : 194.0) Encodes a ribosomal RPL21M protein that is localized to the mitochondrion and is involved in karyogamy during female gametophyte development and fertilization. Mutants display defects in both male and female gametophyte development (i.e.collapsed pollen and female gametophytes with unfused central cells).; NUCLEAR FUSION DEFECTIVE 1 (NFD1); FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, karyogamy, embryo sac development, double fertilization forming a zygote and endosperm, pollen development; LOCATED IN: mitochondrion, ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L21, conserved site (InterPro:IPR018258), Ribosomal protein L21 (InterPro:IPR001787); BEST Arabidopsis thaliana protein match is: Ribosomal protein L21 (TAIR:AT1G35680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36899 : 154.0) no description available & (gnl|cdd|85055 : 124.0) no description available & (reliability: 388.0) & (original description: Putative RPL21M, Description = 50S ribosomal protein L21, mitochondrial, PFAM = PF00829)' T '29.2.1.1.1.2.21' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L21' 'niben101scf01015_158747-163630' '(gnl|cdd|36899 : 137.0) no description available & (at4g30930 : 132.0) Encodes a ribosomal RPL21M protein that is localized to the mitochondrion and is involved in karyogamy during female gametophyte development and fertilization. Mutants display defects in both male and female gametophyte development (i.e.collapsed pollen and female gametophytes with unfused central cells).; NUCLEAR FUSION DEFECTIVE 1 (NFD1); FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, karyogamy, embryo sac development, double fertilization forming a zygote and endosperm, pollen development; LOCATED IN: mitochondrion, ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L21, conserved site (InterPro:IPR018258), Ribosomal protein L21 (InterPro:IPR001787); BEST Arabidopsis thaliana protein match is: Ribosomal protein L21 (TAIR:AT1G35680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85055 : 100.0) no description available & (reliability: 264.0) & (original description: Putative NFD1, Description = 50S ribosomal protein L21, mitochondrial, PFAM = PF00829)' T '29.2.1.1.1.2.21' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L21' 'niben101scf04899_358115-367502' '(at4g30930 : 191.0) Encodes a ribosomal RPL21M protein that is localized to the mitochondrion and is involved in karyogamy during female gametophyte development and fertilization. Mutants display defects in both male and female gametophyte development (i.e.collapsed pollen and female gametophytes with unfused central cells).; NUCLEAR FUSION DEFECTIVE 1 (NFD1); FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, karyogamy, embryo sac development, double fertilization forming a zygote and endosperm, pollen development; LOCATED IN: mitochondrion, ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L21, conserved site (InterPro:IPR018258), Ribosomal protein L21 (InterPro:IPR001787); BEST Arabidopsis thaliana protein match is: Ribosomal protein L21 (TAIR:AT1G35680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36899 : 156.0) no description available & (gnl|cdd|85055 : 123.0) no description available & (reliability: 382.0) & (original description: Putative RPL21M, Description = 50S ribosomal protein L21, mitochondrial, PFAM = PF00829)' T '29.2.1.1.1.2.22' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L22' 'nbv0.3scaffold134183_1-1494' '(p06389|rk22_tobac : 265.0) Chloroplast 50S ribosomal protein L22 - Nicotiana tabacum (Common tobacco) & (atcg00810 : 192.0) encodes a chloroplast ribosomal protein L22, a constituent of the large subunit of the ribosomal complex; ribosomal protein L22 (RPL22); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22, bacterial-type (InterPro:IPR005727), Ribosomal protein L22/L17, conserved site (InterPro:IPR018260); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT4G28360.1). & (gnl|cdd|79252 : 183.0) no description available & (gnl|cdd|36923 : 108.0) no description available & (reliability: 384.0) & (original description: Putative rpl22, Description = 50S ribosomal protein L22, chloroplastic, PFAM = PF00237)' T '29.2.1.1.1.2.22' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L22' 'nbv0.5scaffold5903_124181-126633' '(p06389|rk22_tobac : 275.0) Chloroplast 50S ribosomal protein L22 - Nicotiana tabacum (Common tobacco) & (atcg00810 : 199.0) encodes a chloroplast ribosomal protein L22, a constituent of the large subunit of the ribosomal complex; ribosomal protein L22 (RPL22); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22, bacterial-type (InterPro:IPR005727), Ribosomal protein L22/L17, conserved site (InterPro:IPR018260); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT4G28360.1). & (gnl|cdd|79252 : 192.0) no description available & (gnl|cdd|36923 : 118.0) no description available & (reliability: 398.0) & (original description: Putative rpl22, Description = 50S ribosomal protein L22, chloroplastic, PFAM = PF00237)' T '29.2.1.1.1.2.22' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L22' 'niben044scf00020983ctg007_3852-9275' '(at4g28360 : 284.0) Ribosomal protein L22p/L17e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, ribosome; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22, bacterial-type (InterPro:IPR005727); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT1G52370.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36923 : 128.0) no description available & (gnl|cdd|48343 : 107.0) no description available & (reliability: 568.0) & (original description: Putative rplV, Description = 50S ribosomal protein L22, PFAM = PF00237)' T '29.2.1.1.1.2.22' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L22' 'niben101scf00711_129787-134779' '(at4g28360 : 276.0) Ribosomal protein L22p/L17e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, ribosome; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22, bacterial-type (InterPro:IPR005727); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT1G52370.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36923 : 132.0) no description available & (gnl|cdd|80704 : 110.0) no description available & (reliability: 552.0) & (original description: Putative rplV, Description = 50S ribosomal protein L22, PFAM = PF00237)' T '29.2.1.1.1.2.22' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L22' 'niben101scf01409_1327642-1334303' '(at4g28360 : 271.0) Ribosomal protein L22p/L17e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, ribosome; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22, bacterial-type (InterPro:IPR005727); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT1G52370.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36923 : 131.0) no description available & (gnl|cdd|48343 : 107.0) no description available & (reliability: 542.0) & (original description: Putative rplV, Description = 50S ribosomal protein L22, PFAM = PF00237)' T '29.2.1.1.1.2.22' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L22' 'niben101scf06840_16836-18572' '(p06389|rk22_tobac : 266.0) Chloroplast 50S ribosomal protein L22 - Nicotiana tabacum (Common tobacco) & (atcg00810 : 201.0) encodes a chloroplast ribosomal protein L22, a constituent of the large subunit of the ribosomal complex; ribosomal protein L22 (RPL22); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22, bacterial-type (InterPro:IPR005727), Ribosomal protein L22/L17, conserved site (InterPro:IPR018260); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT4G28360.1). & (gnl|cdd|79252 : 199.0) no description available & (gnl|cdd|36923 : 118.0) no description available & (reliability: 402.0) & (original description: Putative rpl22, Description = 50S ribosomal protein L22, chloroplastic, PFAM = PF00237)' T '29.2.1.1.1.2.22' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L22' 'niben101scf11123_142130-146566' '(at4g28360 : 285.0) Ribosomal protein L22p/L17e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, ribosome; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22, bacterial-type (InterPro:IPR005727); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT1G52370.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36923 : 129.0) no description available & (gnl|cdd|80704 : 110.0) no description available & (reliability: 570.0) & (original description: Putative rplV, Description = 50S ribosomal protein L22, PFAM = PF00237)' T '29.2.1.1.1.2.23' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L23' 'nbv0.5scaffold2861_125273-127551' '(gnl|cdd|79248 : 180.0) no description available & (p06391|rk23_tobac : 177.0) Chloroplast 50S ribosomal protein L23 - Nicotiana tabacum (Common tobacco) & (atcg01300 : 173.0) One of two chloroplast genes that encode chloroplast ribosomal protein L23, a constituent of the large subunit of the ribosomal complex; ribosomal protein L23 (RPL23.2); CONTAINS InterPro DOMAIN/s: Ribosomal protein L23/L25, conserved site (InterPro:IPR001014), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein L25/L23 (InterPro:IPR013025); BEST Arabidopsis thaliana protein match is: ribosomal protein L23.1 (TAIR:ATCG00840.1). & (reliability: 346.0) & (original description: Putative rpl23, Description = 50S ribosomal protein L23, chloroplastic, PFAM = PF00276)' T '29.2.1.1.1.2.24' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L24' 'nbv0.3scaffold12279_37723-40834' '(at5g23535 : 162.0) KOW domain-containing protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824), Ribosomal protein L24 (InterPro:IPR003256); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT5G54600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative rplX, Description = 50S ribosomal protein L24, PFAM = PF17136)' T '29.2.1.1.1.2.24' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L24' 'nbv0.5scaffold2904_182464-189970' '(at5g23535 : 243.0) KOW domain-containing protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824), Ribosomal protein L24 (InterPro:IPR003256); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT5G54600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80439 : 109.0) no description available & (gnl|cdd|36920 : 98.6) no description available & (reliability: 486.0) & (original description: Putative rplX, Description = 50S ribosomal protein L24, PFAM = PF00467;PF17136)' T '29.2.1.1.1.2.24' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L24' 'niben101scf00858_173495-177452' '(q02764|rk24_tobac : 251.0) 50S ribosomal protein L24, chloroplast precursor (CL24) - Nicotiana tabacum (Common tobacco) & (at5g54600 : 211.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: chloroplast, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824), Ribosomal protein L24 (InterPro:IPR003256); Has 5683 Blast hits to 5683 proteins in 2214 species: Archae - 0; Bacteria - 4676; Metazoa - 35; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (gnl|cdd|36920 : 172.0) no description available & (gnl|cdd|80439 : 121.0) no description available & (reliability: 422.0) & (original description: Putative RPL24, Description = 50S ribosomal protein L24, chloroplastic, PFAM = PF00467;PF17136)' T '29.2.1.1.1.2.24' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L24' 'niben101scf02262_143707-151033' '(q02764|rk24_tobac : 242.0) 50S ribosomal protein L24, chloroplast precursor (CL24) - Nicotiana tabacum (Common tobacco) & (at5g54600 : 187.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: chloroplast, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824), Ribosomal protein L24 (InterPro:IPR003256); Has 5683 Blast hits to 5683 proteins in 2214 species: Archae - 0; Bacteria - 4676; Metazoa - 35; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (gnl|cdd|36920 : 165.0) no description available & (gnl|cdd|80439 : 123.0) no description available & (reliability: 374.0) & (original description: Putative RPL24, Description = 50S ribosomal protein L24, chloroplastic, PFAM = PF00467;PF17136)' T '29.2.1.1.1.2.24' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L24' 'niben101scf02262_144041-150479' '(q02764|rk24_tobac : 139.0) 50S ribosomal protein L24, chloroplast precursor (CL24) - Nicotiana tabacum (Common tobacco) & (at5g54600 : 111.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: chloroplast, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824), Ribosomal protein L24 (InterPro:IPR003256); Has 5683 Blast hits to 5683 proteins in 2214 species: Archae - 0; Bacteria - 4676; Metazoa - 35; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (gnl|cdd|36920 : 103.0) no description available & (reliability: 222.0) & (original description: Putative rplX, Description = 50S ribosomal protein L24, PFAM = PF00467)' T '29.2.1.1.1.2.24' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L24' 'niben101scf04488_47821-55584' '(at5g23535 : 246.0) KOW domain-containing protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824), Ribosomal protein L24 (InterPro:IPR003256); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT5G54600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80439 : 110.0) no description available & (gnl|cdd|36920 : 99.0) no description available & (reliability: 492.0) & (original description: Putative rplX, Description = 50S ribosomal protein L24, PFAM = PF00467;PF17136)' T '29.2.1.1.1.2.24' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L24' 'niben101scf15437_339018-343351' '(q02764|rk24_tobac : 286.0) 50S ribosomal protein L24, chloroplast precursor (CL24) - Nicotiana tabacum (Common tobacco) & (at5g54600 : 215.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: chloroplast, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824), Ribosomal protein L24 (InterPro:IPR003256); Has 5683 Blast hits to 5683 proteins in 2214 species: Archae - 0; Bacteria - 4676; Metazoa - 35; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (gnl|cdd|36920 : 170.0) no description available & (gnl|cdd|80439 : 120.0) no description available & (reliability: 430.0) & (original description: Putative RPL24, Description = 50S ribosomal protein L24, chloroplastic, PFAM = PF17136;PF00467)' T '29.2.1.1.1.2.27' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L27' 'nbv0.3scaffold18202_30885-34535' '(at5g15220 : 201.0) Ribosomal protein L27 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L27 (InterPro:IPR001684), Ribosomal protein L27, conserved site (InterPro:IPR018261); BEST Arabidopsis thaliana protein match is: Ribosomal protein L27 family protein (TAIR:AT2G16930.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39800 : 152.0) no description available & (gnl|cdd|81588 : 132.0) no description available & (p30155|rk27_tobac : 98.2) 50S ribosomal protein L27, chloroplast precursor (CL27) - Nicotiana tabacum (Common tobacco) & (reliability: 402.0) & (original description: Putative rpmA, Description = 50S ribosomal protein L27, PFAM = PF01016)' T '29.2.1.1.1.2.27' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L27' 'niben101ctg11520_1-1302' '(at5g15220 : 189.0) Ribosomal protein L27 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L27 (InterPro:IPR001684), Ribosomal protein L27, conserved site (InterPro:IPR018261); BEST Arabidopsis thaliana protein match is: Ribosomal protein L27 family protein (TAIR:AT2G16930.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39800 : 146.0) no description available & (gnl|cdd|81588 : 129.0) no description available & (p30155|rk27_tobac : 94.7) 50S ribosomal protein L27, chloroplast precursor (CL27) - Nicotiana tabacum (Common tobacco) & (reliability: 378.0) & (original description: Putative rpmA, Description = 50S ribosomal protein L27, PFAM = PF01016)' T '29.2.1.1.1.2.27' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L27' 'niben101scf00167_284292-289956' '(p30155|rk27_tobac : 262.0) 50S ribosomal protein L27, chloroplast precursor (CL27) - Nicotiana tabacum (Common tobacco) & (at5g40950 : 213.0) ribosomal protein large subunit 27 (RPL27); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: thylakoid, ribosome, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L27 (InterPro:IPR001684), Ribosomal protein L27, conserved site (InterPro:IPR018261); BEST Arabidopsis thaliana protein match is: Ribosomal protein L27 family protein (TAIR:AT2G16930.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39800 : 163.0) no description available & (gnl|cdd|81588 : 149.0) no description available & (reliability: 426.0) & (original description: Putative RPL27, Description = 50S ribosomal protein L27, chloroplastic, PFAM = PF01016)' T '29.2.1.1.1.2.28' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L28' 'niben044scf00055221ctg000_1-3127' '(p30956|rk28_tobac : 221.0) 50S ribosomal protein L28, chloroplast precursor (CL28) - Nicotiana tabacum (Common tobacco) & (at2g33450 : 154.0) Ribosomal L28 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L28 (InterPro:IPR001383); Has 3594 Blast hits to 3594 proteins in 1265 species: Archae - 0; Bacteria - 2589; Metazoa - 1; Fungi - 7; Plants - 57; Viruses - 0; Other Eukaryotes - 940 (source: NCBI BLink). & (gnl|cdd|80633 : 86.4) no description available & (reliability: 308.0) & (original description: Putative RPL28, Description = 50S ribosomal protein L28, chloroplastic, PFAM = PF00830)' T '29.2.1.1.1.2.28' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L28' 'niben101scf00367_955437-964214' '(p30956|rk28_tobac : 227.0) 50S ribosomal protein L28, chloroplast precursor (CL28) - Nicotiana tabacum (Common tobacco) & (at2g33450 : 150.0) Ribosomal L28 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L28 (InterPro:IPR001383); Has 3594 Blast hits to 3594 proteins in 1265 species: Archae - 0; Bacteria - 2589; Metazoa - 1; Fungi - 7; Plants - 57; Viruses - 0; Other Eukaryotes - 940 (source: NCBI BLink). & (gnl|cdd|80633 : 85.7) no description available & (reliability: 300.0) & (original description: Putative RPL28, Description = 50S ribosomal protein L28, chloroplastic, PFAM = PF00830)' T '29.2.1.1.1.2.29' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L29' 'nbv0.3scaffold17937_2286-5304' '(at5g65220 : 135.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast stroma, chloroplast, nucleoid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9swi6|rk29_maize : 125.0) 50S ribosomal protein L29, chloroplast precursor (CL29) - Zea mays (Maize) & (reliability: 270.0) & (original description: Putative rpl29, Description = 50S ribosomal protein L29, PFAM = PF00831)' T '29.2.1.1.1.2.29' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L29' 'niben101scf04286_176252-181065' '(at5g65220 : 135.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast stroma, chloroplast, nucleoid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9swi6|rk29_maize : 125.0) 50S ribosomal protein L29, chloroplast precursor (CL29) - Zea mays (Maize) & (reliability: 270.0) & (original description: Putative RPL29, Description = 50S ribosomal protein L29, PFAM = PF00831)' T '29.2.1.1.1.2.29' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L29' 'niben101scf07165_59470-62954' '(at5g65220 : 141.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast stroma, chloroplast, nucleoid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9swi6|rk29_maize : 124.0) 50S ribosomal protein L29, chloroplast precursor (CL29) - Zea mays (Maize) & (reliability: 282.0) & (original description: Putative Os02g0754300, Description = Os02g0754300 protein, PFAM = PF00831)' T '29.2.1.1.1.2.29' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L29' 'niben101scf20576_185119-188820' '(at5g65220 : 143.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast stroma, chloroplast, nucleoid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9swi6|rk29_maize : 125.0) 50S ribosomal protein L29, chloroplast precursor (CL29) - Zea mays (Maize) & (reliability: 286.0) & (original description: Putative RPL29, Description = 50S ribosomal protein L29, chloroplastic, PFAM = PF00831)' T '29.2.1.1.1.2.31' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L31' 'niben044scf00003320ctg003_52738-55002' '(at1g75350 : 169.0) embryo defective 2184 (emb2184); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis, embryo development ending in seed dormancy; LOCATED IN: ribosome, chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L31 (InterPro:IPR002150); Has 1009 Blast hits to 1009 proteins in 370 species: Archae - 0; Bacteria - 720; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|79348 : 84.2) no description available & (reliability: 338.0) & (original description: Putative RPL31, Description = 50S ribosomal protein L31, chloroplastic, PFAM = PF01197)' T '29.2.1.1.1.2.31' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L31' 'niben101scf04113_170284-172757' '(at1g75350 : 166.0) embryo defective 2184 (emb2184); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis, embryo development ending in seed dormancy; LOCATED IN: ribosome, chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L31 (InterPro:IPR002150); Has 1009 Blast hits to 1009 proteins in 370 species: Archae - 0; Bacteria - 720; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|79348 : 82.3) no description available & (reliability: 332.0) & (original description: Putative RPL31, Description = 50S ribosomal protein L31, chloroplastic, PFAM = PF01197)' T '29.2.1.1.1.2.32' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L32' '' '' '29.2.1.1.1.2.33' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L33' 'niben101scf11178_184527-185941' '(q7fns6|rk33_atrbe : 117.0) Chloroplast 50S ribosomal protein L33 - Atropa belladonna (Belladonna) (Deadly nightshade) & (gnl|cdd|79318 : 115.0) no description available & (atcg00640 : 107.0) encodes a chloroplast ribosomal protein L33, a constituent of the large subunit of the ribosomal complex; ribosomal protein L33 (RPL33); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L33 (InterPro:IPR001705), Ribosomal protein L33, conserved site (InterPro:IPR018264). & (reliability: 214.0) & (original description: Putative rpl33, Description = 50S ribosomal protein L33, chloroplastic, PFAM = PF00471)' T '29.2.1.1.1.2.34' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L34' 'nbv0.3scaffold5327_15730-21604' '(at5g15260 : 81.3) Ribosomal protein L34e superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195); BEST Arabidopsis thaliana protein match is: Ribosomal protein L34e superfamily protein (TAIR:AT3G01170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative At5g15260, Description = Ribosomal protein L34e superfamily protein, PFAM = )' T '29.2.1.1.1.2.34' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L34' 'niben044scf00024259ctg010_1584-6107' '(at1g29070 : 84.3) Ribosomal protein L34; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34 (InterPro:IPR000271); Has 615 Blast hits to 615 proteins in 261 species: Archae - 0; Bacteria - 556; Metazoa - 0; Fungi - 11; Plants - 33; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative RPL34, Description = 50S ribosomal protein L34, chloroplastic, PFAM = PF00468)' T '29.2.1.1.1.2.34' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L34' 'niben044scf00027156ctg000_11122-16955' '(at3g06180 : 192.0) Ribosomal protein L34e superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195); BEST Arabidopsis thaliana protein match is: Ribosomal protein L34e superfamily protein (TAIR:AT5G19025.1); Has 84 Blast hits to 84 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 73; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative At5g19025, Description = Uncharacterized protein At5g19025, PFAM = )' T '29.2.1.1.1.2.34' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L34' 'niben101scf00155_221945-224613' '(at3g06180 : 82.0) Ribosomal protein L34e superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195); BEST Arabidopsis thaliana protein match is: Ribosomal protein L34e superfamily protein (TAIR:AT5G19025.1); Has 84 Blast hits to 84 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 73; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative Sb03g037880, Description = Putative uncharacterized protein Sb03g037880, PFAM = )' T '29.2.1.1.1.2.34' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L34' 'niben101scf03393_41648-48415' '(at3g06180 : 190.0) Ribosomal protein L34e superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195); BEST Arabidopsis thaliana protein match is: Ribosomal protein L34e superfamily protein (TAIR:AT5G19025.1); Has 84 Blast hits to 84 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 73; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative BnaAnng03100D, Description = BnaAnng03100D protein, PFAM = )' T '29.2.1.1.1.2.34' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L34' 'niben101scf10328_62796-66923' '(at1g29070 : 84.7) Ribosomal protein L34; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34 (InterPro:IPR000271); Has 615 Blast hits to 615 proteins in 261 species: Archae - 0; Bacteria - 556; Metazoa - 0; Fungi - 11; Plants - 33; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative RPL34, Description = 50S ribosomal protein L34, chloroplastic, PFAM = PF00468)' T '29.2.1.1.1.2.36' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L36' '' '' '29.2.1.1.1.2.40' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L40' '' '' '29.2.1.1.1.2.85' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.PSRP5' '' '' '29.2.1.1.1.2.86' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.PSRP6' '' '' '29.2.1.1.2' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion' '' '' '29.2.1.1.2.1' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit' '' '' '29.2.1.1.2.1.2' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S2' '' '' '29.2.1.1.2.1.3' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S3' 'nbv0.5scaffold4021_97782-100196' '(q04716|rt03_pethy : 121.0) Mitochondrial ribosomal protein S3 - Petunia hybrida (Petunia) & (atmg00080 : 92.8) encodes a mitochondrial ribosomal protein L16, which is a constituent of the large ribosomal subunit; ribosomal protein L16 (RPL16); CONTAINS InterPro DOMAIN/s: Ribosomal protein L16 (InterPro:IPR000114), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L16, conserved site (InterPro:IPR020798); BEST Arabidopsis thaliana protein match is: ribosomal protein L16 (TAIR:ATCG00790.1). & (gnl|cdd|84596 : 82.5) no description available & (reliability: 176.4) & (original description: Putative rps3, Description = Ribosomal protein S3, PFAM = PF00252;PF00189)' T '29.2.1.1.2.1.3' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S3' 'niben044scf00001006ctg004_1-1879' '(q04716|rt03_pethy : 120.0) Mitochondrial ribosomal protein S3 - Petunia hybrida (Petunia) & (atmg00080 : 92.8) encodes a mitochondrial ribosomal protein L16, which is a constituent of the large ribosomal subunit; ribosomal protein L16 (RPL16); CONTAINS InterPro DOMAIN/s: Ribosomal protein L16 (InterPro:IPR000114), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L16, conserved site (InterPro:IPR020798); BEST Arabidopsis thaliana protein match is: ribosomal protein L16 (TAIR:ATCG00790.1). & (gnl|cdd|84596 : 80.6) no description available & (reliability: 173.4) & (original description: Putative rps3, Description = Ribosomal protein S3, PFAM = PF00189;PF00252)' T '29.2.1.1.2.1.4' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S4' 'nbv0.5scaffold10545_2332-5453' '(atmg00290 : 473.0) encodes a mitochondrial ribosomal protein S4, a constituent of the small subunit of the ribosomal complex; mitochondrial ribosomal protein S4 (RPS4); FUNCTIONS IN: structural constituent of ribosome, protein binding; INVOLVED IN: translation; LOCATED IN: mitochondrion, mitochondrial small ribosomal subunit; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Alpha-L RNA-binding motif/Ribosomal protein S4 family protein (TAIR:AT2G07734.1). & (p26866|rt04_marpo : 101.0) Mitochondrial ribosomal protein S4 - Marchantia polymorpha (Liverwort) & (reliability: 946.0) & (original description: Putative rps4, Description = Ribosomal protein S4, PFAM = PF01479)' T '29.2.1.1.2.1.7' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S7' '' '' '29.2.1.1.2.1.8' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S8' '' '' '29.2.1.1.2.1.10' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S10' 'niben044scf00028044ctg001_8500-11140' '(p51428|rt10_pea : 152.0) Mitochondrial ribosomal protein S10 - Pisum sativum (Garden pea) & (at3g22300 : 113.0) Nuclear-encoded gene for mitochondrial ribosomal small subunit protein S10; ribosomal protein S10 (RPS10); CONTAINS InterPro DOMAIN/s: Ribosomal protein S10 subgroup (InterPro:IPR005731), Ribosomal protein S10 (InterPro:IPR001848); BEST Arabidopsis thaliana protein match is: putative mitochondrial RNA helicase 1 (TAIR:AT3G22310.1); Has 2936 Blast hits to 2936 proteins in 744 species: Archae - 0; Bacteria - 1485; Metazoa - 4; Fungi - 0; Plants - 119; Viruses - 0; Other Eukaryotes - 1328 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative RPS10, Description = Ribosomal protein S10, mitochondrial, PFAM = PF00338)' T '29.2.1.1.2.1.10' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S10' 'niben101scf08870_85370-88500' '(p51428|rt10_pea : 155.0) Mitochondrial ribosomal protein S10 - Pisum sativum (Garden pea) & (at3g22300 : 115.0) Nuclear-encoded gene for mitochondrial ribosomal small subunit protein S10; ribosomal protein S10 (RPS10); CONTAINS InterPro DOMAIN/s: Ribosomal protein S10 subgroup (InterPro:IPR005731), Ribosomal protein S10 (InterPro:IPR001848); BEST Arabidopsis thaliana protein match is: putative mitochondrial RNA helicase 1 (TAIR:AT3G22310.1); Has 2936 Blast hits to 2936 proteins in 744 species: Archae - 0; Bacteria - 1485; Metazoa - 4; Fungi - 0; Plants - 119; Viruses - 0; Other Eukaryotes - 1328 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative RPS10, Description = Ribosomal protein S10, mitochondrial, PFAM = PF00338)' T '29.2.1.1.2.1.11' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S11' 'nbv0.5scaffold140_650356-655738' '(at1g31817 : 155.0) NUCLEAR FUSION DEFECTIVE 3 (NFD3); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S11 (InterPro:IPR001971); BEST Arabidopsis thaliana protein match is: ribosomal protein S11 (TAIR:ATCG00750.1); Has 7495 Blast hits to 7495 proteins in 2576 species: Archae - 12; Bacteria - 4865; Metazoa - 67; Fungi - 4; Plants - 661; Viruses - 0; Other Eukaryotes - 1886 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative rps11, Description = Ribosomal protein S11, PFAM = PF00411)' T '29.2.1.1.2.1.11' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S11' 'niben044scf00022982ctg004_11304-16677' '(at1g31817 : 160.0) NUCLEAR FUSION DEFECTIVE 3 (NFD3); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S11 (InterPro:IPR001971); BEST Arabidopsis thaliana protein match is: ribosomal protein S11 (TAIR:ATCG00750.1); Has 7495 Blast hits to 7495 proteins in 2576 species: Archae - 12; Bacteria - 4865; Metazoa - 67; Fungi - 4; Plants - 661; Viruses - 0; Other Eukaryotes - 1886 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative rps11, Description = Ribosomal protein S11, PFAM = PF00411)' T '29.2.1.1.2.1.11' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S11' 'niben101scf02346_690000-694392' '(at1g31817 : 161.0) NUCLEAR FUSION DEFECTIVE 3 (NFD3); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S11 (InterPro:IPR001971); BEST Arabidopsis thaliana protein match is: ribosomal protein S11 (TAIR:ATCG00750.1); Has 7495 Blast hits to 7495 proteins in 2576 species: Archae - 12; Bacteria - 4865; Metazoa - 67; Fungi - 4; Plants - 661; Viruses - 0; Other Eukaryotes - 1886 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative rps11, Description = Small subunit ribosomal protein, PFAM = PF00411)' T '29.2.1.1.2.1.11' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S11' 'niben101scf03293_232043-237054' '(at1g31817 : 155.0) NUCLEAR FUSION DEFECTIVE 3 (NFD3); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S11 (InterPro:IPR001971); BEST Arabidopsis thaliana protein match is: ribosomal protein S11 (TAIR:ATCG00750.1); Has 7495 Blast hits to 7495 proteins in 2576 species: Archae - 12; Bacteria - 4865; Metazoa - 67; Fungi - 4; Plants - 661; Viruses - 0; Other Eukaryotes - 1886 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative rps11, Description = Ribosomal protein S11, PFAM = PF00411)' T '29.2.1.1.2.1.12' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S12' '' '' '29.2.1.1.2.1.13' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S13' '' '' '29.2.1.1.2.1.14' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S14' 'nbv0.3scaffold55479_5046-7739' '(p49387|rt14_brana : 101.0) Mitochondrial ribosomal protein S14 - Brassica napus (Rape) & (at2g34520 : 87.8) nuclear-encoded mitochondrial ribosomal protein S14; mitochondrial ribosomal protein S14 (RPS14); CONTAINS InterPro DOMAIN/s: Ribosomal protein S14 (InterPro:IPR001209), Ribosomal protein S14, conserved site (InterPro:IPR018271); Has 6726 Blast hits to 6726 proteins in 2284 species: Archae - 0; Bacteria - 3988; Metazoa - 119; Fungi - 127; Plants - 631; Viruses - 0; Other Eukaryotes - 1861 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative rps14, Description = Ribosomal protein S14, PFAM = )' T '29.2.1.1.2.1.14' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S14' 'nbv0.5scaffold14524_1421-1999' '(p49387|rt14_brana : 115.0) Mitochondrial ribosomal protein S14 - Brassica napus (Rape) & (at2g34520 : 111.0) nuclear-encoded mitochondrial ribosomal protein S14; mitochondrial ribosomal protein S14 (RPS14); CONTAINS InterPro DOMAIN/s: Ribosomal protein S14 (InterPro:IPR001209), Ribosomal protein S14, conserved site (InterPro:IPR018271); Has 6726 Blast hits to 6726 proteins in 2284 species: Archae - 0; Bacteria - 3988; Metazoa - 119; Fungi - 127; Plants - 631; Viruses - 0; Other Eukaryotes - 1861 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative rps14, Description = Ribosomal protein S14, PFAM = PF00253)' T '29.2.1.1.2.1.14' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S14' 'niben101scf02309_397852-400208' '(p49387|rt14_brana : 112.0) Mitochondrial ribosomal protein S14 - Brassica napus (Rape) & (at2g34520 : 109.0) nuclear-encoded mitochondrial ribosomal protein S14; mitochondrial ribosomal protein S14 (RPS14); CONTAINS InterPro DOMAIN/s: Ribosomal protein S14 (InterPro:IPR001209), Ribosomal protein S14, conserved site (InterPro:IPR018271); Has 6726 Blast hits to 6726 proteins in 2284 species: Archae - 0; Bacteria - 3988; Metazoa - 119; Fungi - 127; Plants - 631; Viruses - 0; Other Eukaryotes - 1861 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative rps14, Description = Ribosomal protein S14, PFAM = PF00253)' T '29.2.1.1.2.1.14' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S14' 'niben101scf03643_252831-256041' '(atmg00220 : 469.0) Mitochondrial apocytochrome b (cob) gene encodes a subunit of the ubiquinol-cytochrome c oxidoreductase and is part of a 5 kb transcript. The transcript also contains a pseudogene for ribosomal protein S14 called RPS15 and a tRNA(Ser) gene. Both the Cob and RPS15 genes are edited in the transcript.; apocytochrome b (COB); FUNCTIONS IN: ubiquinol-cytochrome-c reductase activity; INVOLVED IN: aerobic respiration; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Cytochrome b/b6 (InterPro:IPR016175), Cytochrome b/b6, C-terminal (InterPro:IPR005798), Di-haem cytochrome, transmembrane (InterPro:IPR016174), Cytochrome b/b6, N-terminal (InterPro:IPR005797); BEST Arabidopsis thaliana protein match is: Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal (TAIR:AT2G07727.1). & (p05718|cyb_vicfa : 463.0) Cytochrome b - Vicia faba (Broad bean) & (gnl|cdd|29347 : 207.0) no description available & (gnl|cdd|39862 : 202.0) no description available & (reliability: 938.0) & (original description: Putative cob, Description = Cytochrome b, PFAM = PF00032;PF00033)' T '29.2.1.1.2.1.14' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S14' 'niben101scf05363_450256-452579' '(at2g34520 : 132.0) nuclear-encoded mitochondrial ribosomal protein S14; mitochondrial ribosomal protein S14 (RPS14); CONTAINS InterPro DOMAIN/s: Ribosomal protein S14 (InterPro:IPR001209), Ribosomal protein S14, conserved site (InterPro:IPR018271); Has 6726 Blast hits to 6726 proteins in 2284 species: Archae - 0; Bacteria - 3988; Metazoa - 119; Fungi - 127; Plants - 631; Viruses - 0; Other Eukaryotes - 1861 (source: NCBI BLink). & (p14875|rt14_oenbe : 131.0) Mitochondrial ribosomal protein S14 - Oenothera bertiana (Bertero's evening primrose) & (gnl|cdd|82740 : 97.9) no description available & (gnl|cdd|36952 : 92.7) no description available & (reliability: 264.0) & (original description: Putative RPS14, Description = Ribosomal protein S14, mitochondrial, PFAM = PF00253)' T '29.2.1.1.2.1.14' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S14' 'niben101scf07635_3146-6096' '(atmg00220 : 709.0) Mitochondrial apocytochrome b (cob) gene encodes a subunit of the ubiquinol-cytochrome c oxidoreductase and is part of a 5 kb transcript. The transcript also contains a pseudogene for ribosomal protein S14 called RPS15 and a tRNA(Ser) gene. Both the Cob and RPS15 genes are edited in the transcript.; apocytochrome b (COB); FUNCTIONS IN: ubiquinol-cytochrome-c reductase activity; INVOLVED IN: aerobic respiration; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Cytochrome b/b6 (InterPro:IPR016175), Cytochrome b/b6, C-terminal (InterPro:IPR005798), Di-haem cytochrome, transmembrane (InterPro:IPR016174), Cytochrome b/b6, N-terminal (InterPro:IPR005797); BEST Arabidopsis thaliana protein match is: Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal (TAIR:AT2G07727.1). & (p05718|cyb_vicfa : 701.0) Cytochrome b - Vicia faba (Broad bean) & (gnl|cdd|31481 : 292.0) no description available & (gnl|cdd|39862 : 277.0) no description available & (reliability: 1418.0) & (original description: Putative cob, Description = Cytochrome b, PFAM = PF00032;PF00033)' T '29.2.1.1.2.1.16' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S16' 'nbv0.5scaffold4021_97782-100196' '(q04716|rt03_pethy : 121.0) Mitochondrial ribosomal protein S3 - Petunia hybrida (Petunia) & (atmg00080 : 92.8) encodes a mitochondrial ribosomal protein L16, which is a constituent of the large ribosomal subunit; ribosomal protein L16 (RPL16); CONTAINS InterPro DOMAIN/s: Ribosomal protein L16 (InterPro:IPR000114), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L16, conserved site (InterPro:IPR020798); BEST Arabidopsis thaliana protein match is: ribosomal protein L16 (TAIR:ATCG00790.1). & (gnl|cdd|84596 : 82.5) no description available & (reliability: 185.6) & (original description: Putative rps3, Description = Ribosomal protein S3, PFAM = PF00252;PF00189)' T '29.2.1.1.2.1.16' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S16' 'niben044scf00001006ctg004_1-1879' '(q04716|rt03_pethy : 120.0) Mitochondrial ribosomal protein S3 - Petunia hybrida (Petunia) & (atmg00080 : 92.8) encodes a mitochondrial ribosomal protein L16, which is a constituent of the large ribosomal subunit; ribosomal protein L16 (RPL16); CONTAINS InterPro DOMAIN/s: Ribosomal protein L16 (InterPro:IPR000114), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L16, conserved site (InterPro:IPR020798); BEST Arabidopsis thaliana protein match is: ribosomal protein L16 (TAIR:ATCG00790.1). & (gnl|cdd|84596 : 80.6) no description available & (reliability: 185.6) & (original description: Putative rps3, Description = Ribosomal protein S3, PFAM = PF00189;PF00252)' T '29.2.1.1.2.1.16' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S16' 'niben101scf02165_272425-274937' '(atmg00080 : 286.0) encodes a mitochondrial ribosomal protein L16, which is a constituent of the large ribosomal subunit; ribosomal protein L16 (RPL16); CONTAINS InterPro DOMAIN/s: Ribosomal protein L16 (InterPro:IPR000114), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L16, conserved site (InterPro:IPR020798); BEST Arabidopsis thaliana protein match is: ribosomal protein L16 (TAIR:ATCG00790.1). & (p46801|rm16_orysa : 268.0) Mitochondrial 60S ribosomal protein L16 - Oryza sativa (Rice) & (gnl|cdd|38632 : 187.0) no description available & (gnl|cdd|84645 : 149.0) no description available & (reliability: 572.0) & (original description: Putative RPL16, Description = 60S ribosomal protein L16, mitochondrial, PFAM = PF00252)' T '29.2.1.1.2.1.16' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S16' 'niben101scf05605_13633-42113' '(q04716|rt03_pethy : 114.0) Mitochondrial ribosomal protein S3 - Petunia hybrida (Petunia) & (atmg00080 : 98.6) encodes a mitochondrial ribosomal protein L16, which is a constituent of the large ribosomal subunit; ribosomal protein L16 (RPL16); CONTAINS InterPro DOMAIN/s: Ribosomal protein L16 (InterPro:IPR000114), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L16, conserved site (InterPro:IPR020798); BEST Arabidopsis thaliana protein match is: ribosomal protein L16 (TAIR:ATCG00790.1). & (reliability: 197.2) & (original description: Putative rps3, Description = Ribosomal protein S3, PFAM = PF00189;PF00252)' T '29.2.1.1.2.1.19' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S19' '' '' '29.2.1.1.2.1.27' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S27' 'niben101scf00035_169775-172080' '(at5g44710 : 107.0) CONTAINS InterPro DOMAIN/s: Ribosomal protein S27/S33, mitochondrial (InterPro:IPR013219); Has 101 Blast hits to 101 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 59; Plants - 26; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|40041 : 84.0) no description available & (gnl|cdd|71726 : 83.1) no description available & (reliability: 214.0) & (original description: Putative At5g44710, Description = Putative uncharacterized protein At5g44710, PFAM = PF08293)' T '29.2.1.1.2.1.29' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S29' 'niben101scf09101_379865-390804' '(at1g16870 : 561.0) mitochondrial 28S ribosomal protein S29-related; CONTAINS InterPro DOMAIN/s: Ribosomal protein S23/S29, mitochondrial (InterPro:IPR019368); Has 239 Blast hits to 239 proteins in 116 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 38; Plants - 38; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|39131 : 303.0) no description available & (reliability: 1122.0) & (original description: Putative F6I1.13, Description = Mitochondrial 28S ribosomal protein S29-like protein, PFAM = PF10236)' T '29.2.1.1.2.1.31' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S31' '' '' '29.2.1.1.2.2' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit' '' '' '29.2.1.1.2.2.2' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L2' 'nbv0.5scaffold5861_21838-26712' '(atmg00560 : 446.0) encodes a mitochondrial ribosomal protein L2, a constituent of the large subunit of the ribosomal complex; RPL2; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2 (InterPro:IPR002171); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G07715.1). & (p92812|rm02_orysa : 321.0) Mitochondrial 60S ribosomal protein L2 - Oryza sativa (Rice) & (gnl|cdd|35659 : 170.0) no description available & (gnl|cdd|82961 : 84.7) no description available & (reliability: 892.0) & (original description: Putative rpl2, Description = Ribosomal protein L2, PFAM = PF00181)' T '29.2.1.1.2.2.2' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L2' 'nbv0.5scaffold9112_20800-23195' '(p68535|rt12_pethy : 200.0) Mitochondrial ribosomal protein S12 - Petunia hybrida (Petunia) & (atmg00980 : 189.0) ribosomal protein L2; RPSL2; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrial large ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ribosomal protein S12/S23 (InterPro:IPR006032), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S12, bacterial-type (InterPro:IPR005679); BEST Arabidopsis thaliana protein match is: Ribosomal protein S12/S23 family protein (TAIR:AT2G07675.1). & (gnl|cdd|81456 : 171.0) no description available & (gnl|cdd|36961 : 159.0) no description available & (reliability: 378.0) & (original description: Putative RPS12, Description = Ribosomal protein S12, mitochondrial, PFAM = PF00164)' T '29.2.1.1.2.2.2' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L2' 'niben101scf03953_265826-268230' '(p68535|rt12_pethy : 207.0) Mitochondrial ribosomal protein S12 - Petunia hybrida (Petunia) & (atmg00980 : 196.0) ribosomal protein L2; RPSL2; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrial large ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ribosomal protein S12/S23 (InterPro:IPR006032), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S12, bacterial-type (InterPro:IPR005679); BEST Arabidopsis thaliana protein match is: Ribosomal protein S12/S23 family protein (TAIR:AT2G07675.1). & (gnl|cdd|81456 : 173.0) no description available & (gnl|cdd|36961 : 163.0) no description available & (reliability: 392.0) & (original description: Putative RPS12, Description = Ribosomal protein S12, mitochondrial, PFAM = PF00164)' T '29.2.1.1.2.2.2' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L2' 'niben101scf06770_32013-34957' '(atmg00560 : 112.0) encodes a mitochondrial ribosomal protein L2, a constituent of the large subunit of the ribosomal complex; RPL2; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2 (InterPro:IPR002171); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G07715.1). & (p92812|rm02_orysa : 112.0) Mitochondrial 60S ribosomal protein L2 - Oryza sativa (Rice) & (reliability: 224.0) & (original description: Putative rpL2, Description = Ribosomal protein L2, PFAM = PF00181)' T '29.2.1.1.2.2.2' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L2' 'niben101scf10732_205517-210577' '(atmg00560 : 456.0) encodes a mitochondrial ribosomal protein L2, a constituent of the large subunit of the ribosomal complex; RPL2; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2 (InterPro:IPR002171); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G07715.1). & (p92812|rm02_orysa : 315.0) Mitochondrial 60S ribosomal protein L2 - Oryza sativa (Rice) & (gnl|cdd|35659 : 175.0) no description available & (gnl|cdd|82961 : 80.1) no description available & (reliability: 912.0) & (original description: Putative rpl2, Description = Ribosomal protein L2, PFAM = PF00181)' T '29.2.1.1.2.2.2' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L2' 'niben101scf10732_205961-208398' '(atmg00560 : 130.0) encodes a mitochondrial ribosomal protein L2, a constituent of the large subunit of the ribosomal complex; RPL2; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2 (InterPro:IPR002171); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G07715.1). & (p92812|rm02_orysa : 91.3) Mitochondrial 60S ribosomal protein L2 - Oryza sativa (Rice) & (reliability: 260.0) & (original description: Putative rpL2, Description = Ribosomal protein L2, PFAM = )' T '29.2.1.1.2.2.5' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L5' 'niben101scf02309_397262-399907' '(p51409|rm05_soltu : 328.0) Mitochondrial 60S ribosomal protein L5 - Solanum tuberosum (Potato) & (atmg00210 : 303.0) encodes a mitochondrial ribosomal protein L5, a constituent of the large subunit of the ribosomal complex; ribosomal protein L5 (RPL5); CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, N-terminal (InterPro:IPR020927); BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein (TAIR:AT2G07725.1). & (reliability: 606.0) & (original description: Putative RPL5, Description = 60S ribosomal protein L5, mitochondrial, PFAM = )' T '29.2.1.1.2.2.5' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L5' 'niben101scf25294_1-1245' '(p51409|rm05_soltu : 305.0) Mitochondrial 60S ribosomal protein L5 - Solanum tuberosum (Potato) & (atmg00210 : 276.0) encodes a mitochondrial ribosomal protein L5, a constituent of the large subunit of the ribosomal complex; ribosomal protein L5 (RPL5); CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, N-terminal (InterPro:IPR020927); BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein (TAIR:AT2G07725.1). & (reliability: 552.0) & (original description: Putative RPL5, Description = 60S ribosomal protein L5, mitochondrial, PFAM = )' T '29.2.1.1.2.2.6' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L6' '' '' '29.2.1.1.2.2.11' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L11' '' '' '29.2.1.1.2.2.16' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L16' '' '' '29.2.1.1.2.2.21' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L21' '' '' '29.2.1.1.2.2.29' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L29' 'nbv0.3scaffold11173_38112-44265' '(at1g07830 : 174.0) ribosomal protein L29 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, ribosome, mitochondrial ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L47, mitochondrial (InterPro:IPR010729), Ribosomal protein L29 (InterPro:IPR001854); Has 365 Blast hits to 365 proteins in 201 species: Archae - 0; Bacteria - 2; Metazoa - 115; Fungi - 146; Plants - 47; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|38541 : 144.0) no description available & (gnl|cdd|70449 : 103.0) no description available & (reliability: 348.0) & (original description: Putative RM47, Description = RM47, ribosomal protein 47 mitochondrial large ribosomal subunit, PFAM = PF06984)' T '29.2.1.1.2.2.29' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L29' 'niben044scf00029881ctg003_20023-29968' '(at1g07830 : 174.0) ribosomal protein L29 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, ribosome, mitochondrial ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L47, mitochondrial (InterPro:IPR010729), Ribosomal protein L29 (InterPro:IPR001854); Has 365 Blast hits to 365 proteins in 201 species: Archae - 0; Bacteria - 2; Metazoa - 115; Fungi - 146; Plants - 47; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|38541 : 145.0) no description available & (gnl|cdd|70449 : 107.0) no description available & (reliability: 348.0) & (original description: Putative RM47, Description = RM47, ribosomal protein 47 mitochondrial large ribosomal subunit, PFAM = PF06984)' T '29.2.1.1.2.2.29' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L29' 'niben101scf01463_501839-512101' '(at1g07830 : 174.0) ribosomal protein L29 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, ribosome, mitochondrial ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L47, mitochondrial (InterPro:IPR010729), Ribosomal protein L29 (InterPro:IPR001854); Has 365 Blast hits to 365 proteins in 201 species: Archae - 0; Bacteria - 2; Metazoa - 115; Fungi - 146; Plants - 47; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|38541 : 142.0) no description available & (gnl|cdd|70449 : 106.0) no description available & (reliability: 348.0) & (original description: Putative RM47, Description = RM47, ribosomal protein 47 mitochondrial large ribosomal subunit, PFAM = PF06984)' T '29.2.1.1.2.2.29' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L29' 'niben101scf02237_367118-373462' '(at1g07830 : 164.0) ribosomal protein L29 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, ribosome, mitochondrial ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L47, mitochondrial (InterPro:IPR010729), Ribosomal protein L29 (InterPro:IPR001854); Has 365 Blast hits to 365 proteins in 201 species: Archae - 0; Bacteria - 2; Metazoa - 115; Fungi - 146; Plants - 47; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|38541 : 132.0) no description available & (gnl|cdd|70449 : 92.0) no description available & (reliability: 328.0) & (original description: Putative ACYPI007741, Description = 39S ribosomal protein L47, mitochondrial, PFAM = PF06984)' T '29.2.1.1.2.2.37' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L37' 'niben101scf05566_102177-104572' '(at3g01740 : 147.0) Mitochondrial ribosomal protein L37; CONTAINS InterPro DOMAIN/s: Ribosomal protein L37, mitochondrial (InterPro:IPR013870); BEST Arabidopsis thaliana protein match is: Mitochondrial ribosomal protein L37 (TAIR:AT5G14290.1); Has 178 Blast hits to 178 proteins in 92 species: Archae - 0; Bacteria - 0; Metazoa - 64; Fungi - 40; Plants - 51; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|38645 : 113.0) no description available & (gnl|cdd|71987 : 91.6) no description available & (reliability: 294.0) & (original description: Putative At5g14290, Description = Mitochondrial ribosomal protein L37, PFAM = PF08561)' T '29.2.1.1.2.51' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.L51/S25/CI-B8' 'nbv0.3scaffold16553_6388-12290' '(at3g59650 : 167.0) mitochondrial ribosomal protein L51/S25/CI-B8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein/NADH dehydrogenase domain (InterPro:IPR007741). & (gnl|cdd|38655 : 129.0) no description available & (reliability: 334.0) & (original description: Putative Sb01g043440, Description = Putative uncharacterized protein Sb01g043440, PFAM = )' T '29.2.1.1.2.51' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.L51/S25/CI-B8' 'niben101scf04686_34572-40474' '(at3g59650 : 197.0) mitochondrial ribosomal protein L51/S25/CI-B8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein/NADH dehydrogenase domain (InterPro:IPR007741). & (gnl|cdd|38655 : 153.0) no description available & (reliability: 394.0) & (original description: Putative MRPL43, Description = Large subunit ribosomal protein L43, mitochondrial, PFAM = PF05047)' T '29.2.1.1.3' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar' '' '' '29.2.1.1.3.1' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit' '' '' '29.2.1.1.3.1.1' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S1' 'nbv0.5scaffold3671_213012-220316' '(p29344|rr1_spiol : 581.0) 30S ribosomal protein S1, chloroplast precursor (CS1) - Spinacia oleracea (Spinach) & (at5g30510 : 548.0) ribosomal protein S1 (RPS1); FUNCTIONS IN: RNA binding; LOCATED IN: thylakoid, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding proteins superfamily (TAIR:AT1G71720.1); Has 27453 Blast hits to 18967 proteins in 2720 species: Archae - 77; Bacteria - 20681; Metazoa - 178; Fungi - 177; Plants - 343; Viruses - 0; Other Eukaryotes - 5997 (source: NCBI BLink). & (gnl|cdd|82218 : 317.0) no description available & (reliability: 1096.0) & (original description: Putative RPS1, Description = 30S ribosomal protein S1, chloroplastic, PFAM = PF00575;PF00575;PF00575)' T '29.2.1.1.3.1.1' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S1' 'niben101scf03840_187139-201195' '(p29344|rr1_spiol : 579.0) 30S ribosomal protein S1, chloroplast precursor (CS1) - Spinacia oleracea (Spinach) & (at5g30510 : 545.0) ribosomal protein S1 (RPS1); FUNCTIONS IN: RNA binding; LOCATED IN: thylakoid, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding proteins superfamily (TAIR:AT1G71720.1); Has 27453 Blast hits to 18967 proteins in 2720 species: Archae - 77; Bacteria - 20681; Metazoa - 178; Fungi - 177; Plants - 343; Viruses - 0; Other Eukaryotes - 5997 (source: NCBI BLink). & (gnl|cdd|82218 : 315.0) no description available & (reliability: 1090.0) & (original description: Putative rps1, Description = 30S ribosomal protein S1, PFAM = PF00575;PF00575;PF00575)' T '29.2.1.1.3.1.1' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S1' 'niben101scf08308_337799-345088' '(at1g71720 : 490.0) Nucleic acid-binding proteins superfamily; FUNCTIONS IN: RNA binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029); BEST Arabidopsis thaliana protein match is: ribosomal protein S1 (TAIR:AT5G30510.1); Has 12228 Blast hits to 10737 proteins in 2456 species: Archae - 10; Bacteria - 9648; Metazoa - 36; Fungi - 16; Plants - 190; Viruses - 0; Other Eukaryotes - 2328 (source: NCBI BLink). & (gnl|cdd|82218 : 132.0) no description available & (p29344|rr1_spiol : 115.0) 30S ribosomal protein S1, chloroplast precursor (CS1) - Spinacia oleracea (Spinach) & (reliability: 980.0) & (original description: Putative RLSB, Description = Plastid S1 binding domain protein, PFAM = PF00575;PF00575)' T '29.2.1.1.3.1.4' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S4' 'nbv0.5scaffold10545_2332-5453' '(atmg00290 : 473.0) encodes a mitochondrial ribosomal protein S4, a constituent of the small subunit of the ribosomal complex; mitochondrial ribosomal protein S4 (RPS4); FUNCTIONS IN: structural constituent of ribosome, protein binding; INVOLVED IN: translation; LOCATED IN: mitochondrion, mitochondrial small ribosomal subunit; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Alpha-L RNA-binding motif/Ribosomal protein S4 family protein (TAIR:AT2G07734.1). & (p26866|rt04_marpo : 101.0) Mitochondrial ribosomal protein S4 - Marchantia polymorpha (Liverwort) & (reliability: 946.0) & (original description: Putative rps4, Description = Ribosomal protein S4, PFAM = PF01479)' T '29.2.1.1.3.1.5' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S5' 'niben101scf00451_349357-356011' '(at1g64880 : 503.0) Ribosomal protein S5 family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation; LOCATED IN: ribosome, Golgi apparatus, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal (InterPro:IPR013810); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT2G33800.1); Has 12743 Blast hits to 11445 proteins in 2840 species: Archae - 327; Bacteria - 5337; Metazoa - 1616; Fungi - 508; Plants - 194; Viruses - 58; Other Eukaryotes - 4703 (source: NCBI BLink). & (gnl|cdd|37857 : 164.0) no description available & (gnl|cdd|30447 : 146.0) no description available & (q9st69|rr5_spiol : 80.5) 30S ribosomal protein S5, chloroplast precursor - Spinacia oleracea (Spinach) & (reliability: 1006.0) & (original description: Putative At1g64880, Description = At1g64880, PFAM = PF00333;PF03719)' T '29.2.1.1.3.1.6' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S6' 'nbv0.5scaffold1935_254449-257794' '(at3g18760 : 164.0) Translation elongation factor EF1B/ribosomal protein S6 family protein; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Ribosomal protein S6 (InterPro:IPR000529); Has 42 Blast hits to 42 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|39906 : 99.6) no description available & (reliability: 328.0) & (original description: Putative Os01g0220300, Description = Os01g0220300 protein, PFAM = PF01250)' T '29.2.1.1.3.1.6' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S6' 'niben044scf00037043ctg010_26776-31559' '(at3g17170 : 266.0) REGULATOR OF FATTY-ACID COMPOSITION 3 (RFC3); FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Ribosomal protein S6 (InterPro:IPR000529); Has 13593 Blast hits to 10425 proteins in 2441 species: Archae - 19; Bacteria - 4805; Metazoa - 3511; Fungi - 908; Plants - 375; Viruses - 253; Other Eukaryotes - 3722 (source: NCBI BLink). & (gnl|cdd|80676 : 98.2) no description available & (reliability: 532.0) & (original description: Putative RFC3, Description = 30S ribosomal protein S6, PFAM = PF01250)' T '29.2.1.1.3.1.6' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S6' 'niben101scf05895_82476-86916' '(at3g18760 : 165.0) Translation elongation factor EF1B/ribosomal protein S6 family protein; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Ribosomal protein S6 (InterPro:IPR000529); Has 42 Blast hits to 42 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|39906 : 98.9) no description available & (reliability: 330.0) & (original description: Putative Os01g0220300, Description = Os01g0220300 protein, PFAM = PF01250)' T '29.2.1.1.3.1.6' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S6' 'niben101scf09178_226670-230889' '(at3g18760 : 159.0) Translation elongation factor EF1B/ribosomal protein S6 family protein; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Ribosomal protein S6 (InterPro:IPR000529); Has 42 Blast hits to 42 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|39906 : 93.5) no description available & (reliability: 318.0) & (original description: Putative Os01g0220300, Description = Os01g0220300 protein, PFAM = PF01250)' T '29.2.1.1.3.1.7' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S7' '' '' '29.2.1.1.3.1.9' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S9' '' '' '29.2.1.1.3.1.10' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S10' '' '' '29.2.1.1.3.1.11' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S11' '' '' '29.2.1.1.3.1.12' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S12' 'nbv0.5scaffold9112_20800-23195' '(p68535|rt12_pethy : 200.0) Mitochondrial ribosomal protein S12 - Petunia hybrida (Petunia) & (atmg00980 : 189.0) ribosomal protein L2; RPSL2; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrial large ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ribosomal protein S12/S23 (InterPro:IPR006032), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S12, bacterial-type (InterPro:IPR005679); BEST Arabidopsis thaliana protein match is: Ribosomal protein S12/S23 family protein (TAIR:AT2G07675.1). & (gnl|cdd|81456 : 171.0) no description available & (gnl|cdd|36961 : 159.0) no description available & (reliability: 378.0) & (original description: Putative RPS12, Description = Ribosomal protein S12, mitochondrial, PFAM = PF00164)' T '29.2.1.1.3.1.12' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S12' 'niben101scf03953_265826-268230' '(p68535|rt12_pethy : 207.0) Mitochondrial ribosomal protein S12 - Petunia hybrida (Petunia) & (atmg00980 : 196.0) ribosomal protein L2; RPSL2; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrial large ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ribosomal protein S12/S23 (InterPro:IPR006032), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S12, bacterial-type (InterPro:IPR005679); BEST Arabidopsis thaliana protein match is: Ribosomal protein S12/S23 family protein (TAIR:AT2G07675.1). & (gnl|cdd|81456 : 173.0) no description available & (gnl|cdd|36961 : 163.0) no description available & (reliability: 392.0) & (original description: Putative RPS12, Description = Ribosomal protein S12, mitochondrial, PFAM = PF00164)' T '29.2.1.1.3.1.15' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S15' 'niben101scf06156_235274-264929' '(at1g80620 : 248.0) S15/NS1, RNA-binding protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: small ribosomal subunit, ribosome, intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S15 (InterPro:IPR000589), Ribosomal protein S15, bacterial-type (InterPro:IPR005290), S15/NS1, RNA-binding (InterPro:IPR009068); BEST Arabidopsis thaliana protein match is: S15/NS1, RNA-binding protein (TAIR:AT1G15810.1); Has 7972 Blast hits to 7972 proteins in 2715 species: Archae - 0; Bacteria - 5433; Metazoa - 85; Fungi - 116; Plants - 310; Viruses - 0; Other Eukaryotes - 2028 (source: NCBI BLink). & (gnl|cdd|38026 : 150.0) no description available & (gnl|cdd|81667 : 92.4) no description available & (reliability: 496.0) & (original description: Putative rpsO, Description = 30S ribosomal protein S15, PFAM = PF00312)' T '29.2.1.1.3.1.16' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S16' 'nbv0.3scaffold4619_1750-6558' '(at5g56940 : 185.0) Ribosomal protein S16 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: mitochondrion, ribosome, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S16 (InterPro:IPR000307); BEST Arabidopsis thaliana protein match is: small subunit ribosomal protein 16 (TAIR:AT4G34620.1); Has 8528 Blast hits to 8528 proteins in 2923 species: Archae - 0; Bacteria - 5438; Metazoa - 128; Fungi - 129; Plants - 517; Viruses - 0; Other Eukaryotes - 2316 (source: NCBI BLink). & (gnl|cdd|38629 : 148.0) no description available & (gnl|cdd|80466 : 103.0) no description available & (reliability: 370.0) & (original description: Putative rpsP, Description = 30S ribosomal protein S16, PFAM = PF00886)' T '29.2.1.1.3.1.16' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S16' 'niben044scf00014890ctg002_51476-55073' '(at5g56940 : 117.0) Ribosomal protein S16 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: mitochondrion, ribosome, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S16 (InterPro:IPR000307); BEST Arabidopsis thaliana protein match is: small subunit ribosomal protein 16 (TAIR:AT4G34620.1); Has 8528 Blast hits to 8528 proteins in 2923 species: Archae - 0; Bacteria - 5438; Metazoa - 128; Fungi - 129; Plants - 517; Viruses - 0; Other Eukaryotes - 2316 (source: NCBI BLink). & (gnl|cdd|38629 : 97.7) no description available & (reliability: 234.0) & (original description: Putative rpsP, Description = 30S ribosomal protein S16, PFAM = PF00886)' T '29.2.1.1.3.1.16' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S16' 'niben101scf01340_192260-204484' '(at5g56940 : 191.0) Ribosomal protein S16 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: mitochondrion, ribosome, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S16 (InterPro:IPR000307); BEST Arabidopsis thaliana protein match is: small subunit ribosomal protein 16 (TAIR:AT4G34620.1); Has 8528 Blast hits to 8528 proteins in 2923 species: Archae - 0; Bacteria - 5438; Metazoa - 128; Fungi - 129; Plants - 517; Viruses - 0; Other Eukaryotes - 2316 (source: NCBI BLink). & (gnl|cdd|38629 : 148.0) no description available & (gnl|cdd|80466 : 103.0) no description available & (reliability: 382.0) & (original description: Putative rps16, Description = 30S ribosomal protein S16, PFAM = PF00886)' T '29.2.1.1.3.1.17' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S17' '' '' '29.2.1.1.3.1.18' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S18' 'niben101scf01660_289111-293904' '(at1g07210 : 176.0) Ribosomal protein S18; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S18 (InterPro:IPR001648); Has 5527 Blast hits to 5527 proteins in 2078 species: Archae - 0; Bacteria - 4261; Metazoa - 44; Fungi - 19; Plants - 203; Viruses - 0; Other Eukaryotes - 1000 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative BnaA10g04660D, Description = BnaA10g04660D protein, PFAM = PF01084)' T '29.2.1.1.3.1.19' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S19' '' '' '29.2.1.1.3.1.21' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S21' 'nbv0.5scaffold5963_85983-89636' '(at3g27160 : 125.0) GHS1 encodes plastid ribosomal protein S21; GLUCOSE HYPERSENSITIVE 1 (GHS1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21 (InterPro:IPR001911); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21 family protein (TAIR:AT5G63300.1); Has 1937 Blast hits to 1937 proteins in 824 species: Archae - 0; Bacteria - 1717; Metazoa - 0; Fungi - 4; Plants - 72; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative rps21, Description = 30S ribosomal protein S21, chloroplastic, PFAM = PF01165)' T '29.2.1.1.3.1.21' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S21' 'niben044scf00050087ctg005_1734-6182' '(at3g27160 : 127.0) GHS1 encodes plastid ribosomal protein S21; GLUCOSE HYPERSENSITIVE 1 (GHS1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21 (InterPro:IPR001911); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21 family protein (TAIR:AT5G63300.1); Has 1937 Blast hits to 1937 proteins in 824 species: Archae - 0; Bacteria - 1717; Metazoa - 0; Fungi - 4; Plants - 72; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative rps21, Description = 30S ribosomal protein S21, chloroplastic, PFAM = PF01165)' T '29.2.1.1.3.1.21' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S21' 'niben044scf00057730ctg000_1-3155' '(at3g27160 : 119.0) GHS1 encodes plastid ribosomal protein S21; GLUCOSE HYPERSENSITIVE 1 (GHS1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21 (InterPro:IPR001911); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21 family protein (TAIR:AT5G63300.1); Has 1937 Blast hits to 1937 proteins in 824 species: Archae - 0; Bacteria - 1717; Metazoa - 0; Fungi - 4; Plants - 72; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative rps21, Description = 30S ribosomal protein S21, chloroplastic, PFAM = PF01165)' T '29.2.1.1.3.1.21' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S21' 'niben101scf00109_852175-856488' '(at3g27160 : 124.0) GHS1 encodes plastid ribosomal protein S21; GLUCOSE HYPERSENSITIVE 1 (GHS1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21 (InterPro:IPR001911); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21 family protein (TAIR:AT5G63300.1); Has 1937 Blast hits to 1937 proteins in 824 species: Archae - 0; Bacteria - 1717; Metazoa - 0; Fungi - 4; Plants - 72; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative rps21, Description = 30S ribosomal protein S21, chloroplastic, PFAM = PF01165)' T '29.2.1.1.3.1.21' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S21' 'niben101scf04328_178681-188066' '(at3g27160 : 100.0) GHS1 encodes plastid ribosomal protein S21; GLUCOSE HYPERSENSITIVE 1 (GHS1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21 (InterPro:IPR001911); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21 family protein (TAIR:AT5G63300.1); Has 1937 Blast hits to 1937 proteins in 824 species: Archae - 0; Bacteria - 1717; Metazoa - 0; Fungi - 4; Plants - 72; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative GHS1, Description = GLUCOSE HYPERSENSITIVE 1 family protein, PFAM = PF01165)' T '29.2.1.1.3.1.21' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S21' 'niben101scf13057_35383-50869' '(at3g27160 : 115.0) GHS1 encodes plastid ribosomal protein S21; GLUCOSE HYPERSENSITIVE 1 (GHS1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21 (InterPro:IPR001911); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21 family protein (TAIR:AT5G63300.1); Has 1937 Blast hits to 1937 proteins in 824 species: Archae - 0; Bacteria - 1717; Metazoa - 0; Fungi - 4; Plants - 72; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative rps21, Description = 30S ribosomal protein S21, chloroplastic, PFAM = PF01165)' T '29.2.1.1.3.1.21' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S21' 'niben101scf15120_198847-204001' '(at3g27160 : 83.2) GHS1 encodes plastid ribosomal protein S21; GLUCOSE HYPERSENSITIVE 1 (GHS1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21 (InterPro:IPR001911); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21 family protein (TAIR:AT5G63300.1); Has 1937 Blast hits to 1937 proteins in 824 species: Archae - 0; Bacteria - 1717; Metazoa - 0; Fungi - 4; Plants - 72; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative rps21, Description = At5g63300, PFAM = PF01165)' T '29.2.1.1.3.2' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit' '' '' '29.2.1.1.3.2.1' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L1' 'nbv0.3scaffold44532_6698-17367' '(at2g42710 : 253.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, bacterial-type (InterPro:IPR005878), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT3G63490.1); Has 9261 Blast hits to 9236 proteins in 2822 species: Archae - 147; Bacteria - 5388; Metazoa - 398; Fungi - 257; Plants - 180; Viruses - 2; Other Eukaryotes - 2889 (source: NCBI BLink). & (gnl|cdd|81579 : 233.0) no description available & (gnl|cdd|36782 : 120.0) no description available & (q9le95|rk1_spiol : 113.0) 50S ribosomal protein L1, chloroplast precursor (CL1) - Spinacia oleracea (Spinach) & (reliability: 506.0) & (original description: Putative rplA, Description = 50S ribosomal protein L1, PFAM = PF00687)' T '29.2.1.1.3.2.1' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L1' 'niben044scf00004038ctg005_12183-18012' '(at2g42710 : 167.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, bacterial-type (InterPro:IPR005878), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT3G63490.1); Has 9261 Blast hits to 9236 proteins in 2822 species: Archae - 147; Bacteria - 5388; Metazoa - 398; Fungi - 257; Plants - 180; Viruses - 2; Other Eukaryotes - 2889 (source: NCBI BLink). & (gnl|cdd|81579 : 129.0) no description available & (q9le95|rk1_spiol : 83.6) 50S ribosomal protein L1, chloroplast precursor (CL1) - Spinacia oleracea (Spinach) & (gnl|cdd|36782 : 82.0) no description available & (reliability: 334.0) & (original description: Putative rplA, Description = 50S ribosomal protein L1, PFAM = PF00687)' T '29.2.1.1.3.2.1' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L1' 'niben101scf06183_699383-705612' '(at2g42710 : 165.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, bacterial-type (InterPro:IPR005878), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT3G63490.1); Has 9261 Blast hits to 9236 proteins in 2822 species: Archae - 147; Bacteria - 5388; Metazoa - 398; Fungi - 257; Plants - 180; Viruses - 2; Other Eukaryotes - 2889 (source: NCBI BLink). & (gnl|cdd|81579 : 129.0) no description available & (q9le95|rk1_spiol : 84.0) 50S ribosomal protein L1, chloroplast precursor (CL1) - Spinacia oleracea (Spinach) & (gnl|cdd|36782 : 82.4) no description available & (reliability: 330.0) & (original description: Putative rplA, Description = 50S ribosomal protein L1, PFAM = PF00687)' T '29.2.1.1.3.2.1' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L1' 'niben101scf17947_23774-40789' '(at2g42710 : 270.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, bacterial-type (InterPro:IPR005878), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT3G63490.1); Has 9261 Blast hits to 9236 proteins in 2822 species: Archae - 147; Bacteria - 5388; Metazoa - 398; Fungi - 257; Plants - 180; Viruses - 2; Other Eukaryotes - 2889 (source: NCBI BLink). & (gnl|cdd|81579 : 233.0) no description available & (q9le95|rk1_spiol : 125.0) 50S ribosomal protein L1, chloroplast precursor (CL1) - Spinacia oleracea (Spinach) & (gnl|cdd|36782 : 120.0) no description available & (reliability: 540.0) & (original description: Putative rplA, Description = 50S ribosomal protein L1, PFAM = PF00687)' T '29.2.1.1.3.2.2' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L2' 'niben101scf01688_280851-285006' '(gnl|cdd|82961 : 193.0) no description available & (at2g44065 : 179.0) Ribosomal protein L2 family; FUNCTIONS IN: structural constituent of ribosome, RNA binding, transferase activity; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L2, C-terminal (InterPro:IPR022669), Ribosomal protein L2, conserved site (InterPro:IPR022671), Translation protein SH3-like, subgroup (InterPro:IPR014722), Ribosomal protein L2, bacterial-type (InterPro:IPR005880), Ribosomal protein L2 (InterPro:IPR002171); BEST Arabidopsis thaliana protein match is: ribosomal protein L2 (TAIR:ATCG01310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p92812|rm02_orysa : 163.0) Mitochondrial 60S ribosomal protein L2 - Oryza sativa (Rice) & (gnl|cdd|35659 : 126.0) no description available & (reliability: 358.0) & (original description: Putative rpl2, Description = Ribosomal protein L2, PFAM = PF03947)' T '29.2.1.1.3.2.2' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L2' 'niben101scf04692_64071-66808' '(gnl|cdd|82961 : 192.0) no description available & (at2g44065 : 176.0) Ribosomal protein L2 family; FUNCTIONS IN: structural constituent of ribosome, RNA binding, transferase activity; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L2, C-terminal (InterPro:IPR022669), Ribosomal protein L2, conserved site (InterPro:IPR022671), Translation protein SH3-like, subgroup (InterPro:IPR014722), Ribosomal protein L2, bacterial-type (InterPro:IPR005880), Ribosomal protein L2 (InterPro:IPR002171); BEST Arabidopsis thaliana protein match is: ribosomal protein L2 (TAIR:ATCG01310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p92812|rm02_orysa : 162.0) Mitochondrial 60S ribosomal protein L2 - Oryza sativa (Rice) & (gnl|cdd|35659 : 126.0) no description available & (reliability: 352.0) & (original description: Putative rpl2, Description = Ribosomal protein L2, PFAM = PF03947)' T '29.2.1.1.3.2.3' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L3' '' '' '29.2.1.1.3.2.4' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L4' 'nbv0.5scaffold7481_53710-60779' '(at2g20060 : 450.0) Ribosomal protein L4/L1 family; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4 (InterPro:IPR015498), Ribosomal protein L4/L1e, bacterial-type (InterPro:IPR013005), Ribosomal protein L4/L1e (InterPro:IPR002136); BEST Arabidopsis thaliana protein match is: ribosomal protein L4 (TAIR:AT1G07320.4); Has 8236 Blast hits to 8236 proteins in 2694 species: Archae - 70; Bacteria - 5573; Metazoa - 121; Fungi - 129; Plants - 100; Viruses - 0; Other Eukaryotes - 2243 (source: NCBI BLink). & (gnl|cdd|36837 : 279.0) no description available & (gnl|cdd|81519 : 256.0) no description available & (o80361|rk4_tobac : 97.1) 50S ribosomal protein L4, chloroplast precursor (CL4) (R-protein L4) - Nicotiana tabacum (Common tobacco) & (reliability: 900.0) & (original description: Putative rplD, Description = 50S ribosomal protein L4, PFAM = PF00573)' T '29.2.1.1.3.2.4' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L4' 'niben044scf00025441ctg015_4416-12591' '(at2g20060 : 448.0) Ribosomal protein L4/L1 family; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4 (InterPro:IPR015498), Ribosomal protein L4/L1e, bacterial-type (InterPro:IPR013005), Ribosomal protein L4/L1e (InterPro:IPR002136); BEST Arabidopsis thaliana protein match is: ribosomal protein L4 (TAIR:AT1G07320.4); Has 8236 Blast hits to 8236 proteins in 2694 species: Archae - 70; Bacteria - 5573; Metazoa - 121; Fungi - 129; Plants - 100; Viruses - 0; Other Eukaryotes - 2243 (source: NCBI BLink). & (gnl|cdd|36837 : 277.0) no description available & (gnl|cdd|81519 : 256.0) no description available & (o80361|rk4_tobac : 96.7) 50S ribosomal protein L4, chloroplast precursor (CL4) (R-protein L4) - Nicotiana tabacum (Common tobacco) & (reliability: 896.0) & (original description: Putative rplD, Description = 50S ribosomal protein L4, PFAM = PF00573)' T '29.2.1.1.3.2.4' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L4' 'niben101scf04007_309216-317391' '(at2g20060 : 448.0) Ribosomal protein L4/L1 family; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4 (InterPro:IPR015498), Ribosomal protein L4/L1e, bacterial-type (InterPro:IPR013005), Ribosomal protein L4/L1e (InterPro:IPR002136); BEST Arabidopsis thaliana protein match is: ribosomal protein L4 (TAIR:AT1G07320.4); Has 8236 Blast hits to 8236 proteins in 2694 species: Archae - 70; Bacteria - 5573; Metazoa - 121; Fungi - 129; Plants - 100; Viruses - 0; Other Eukaryotes - 2243 (source: NCBI BLink). & (gnl|cdd|36837 : 276.0) no description available & (gnl|cdd|81519 : 256.0) no description available & (o80361|rk4_tobac : 96.3) 50S ribosomal protein L4, chloroplast precursor (CL4) (R-protein L4) - Nicotiana tabacum (Common tobacco) & (reliability: 896.0) & (original description: Putative rplD, Description = 50S ribosomal protein L4, PFAM = PF00573)' T '29.2.1.1.3.2.4' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L4' 'niben101scf04007_312827-317035' '(at2g20060 : 324.0) Ribosomal protein L4/L1 family; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4 (InterPro:IPR015498), Ribosomal protein L4/L1e, bacterial-type (InterPro:IPR013005), Ribosomal protein L4/L1e (InterPro:IPR002136); BEST Arabidopsis thaliana protein match is: ribosomal protein L4 (TAIR:AT1G07320.4); Has 8236 Blast hits to 8236 proteins in 2694 species: Archae - 70; Bacteria - 5573; Metazoa - 121; Fungi - 129; Plants - 100; Viruses - 0; Other Eukaryotes - 2243 (source: NCBI BLink). & (gnl|cdd|36837 : 222.0) no description available & (gnl|cdd|81519 : 218.0) no description available & (o49937|rk4_spiol : 84.0) 50S ribosomal protein L4, chloroplast precursor (R-protein L4) - Spinacia oleracea (Spinach) & (reliability: 648.0) & (original description: Putative rplD, Description = 50S ribosomal protein L4, PFAM = PF00573)' T '29.2.1.1.3.2.4' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L4' 'niben101scf22899_1410-6867' '(at2g20060 : 281.0) Ribosomal protein L4/L1 family; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4 (InterPro:IPR015498), Ribosomal protein L4/L1e, bacterial-type (InterPro:IPR013005), Ribosomal protein L4/L1e (InterPro:IPR002136); BEST Arabidopsis thaliana protein match is: ribosomal protein L4 (TAIR:AT1G07320.4); Has 8236 Blast hits to 8236 proteins in 2694 species: Archae - 70; Bacteria - 5573; Metazoa - 121; Fungi - 129; Plants - 100; Viruses - 0; Other Eukaryotes - 2243 (source: NCBI BLink). & (gnl|cdd|36837 : 182.0) no description available & (gnl|cdd|81519 : 177.0) no description available & (o49937|rk4_spiol : 81.3) 50S ribosomal protein L4, chloroplast precursor (R-protein L4) - Spinacia oleracea (Spinach) & (reliability: 562.0) & (original description: Putative MRPL4, Description = Mitochondrial ribosomal protein L4, PFAM = PF00573)' T '29.2.1.1.3.2.9' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L9' 'niben044scf00013509ctg001_1-10506' '(at5g53070 : 214.0) Ribosomal protein L9/RNase H1; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9 (InterPro:IPR000244), Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Ribosomal protein L9, N-terminal (InterPro:IPR020070), Ribosomal protein L9, C-terminal (InterPro:IPR020069); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39807 : 105.0) no description available & (reliability: 428.0) & (original description: Putative At5g53070, Description = Putative uncharacterized protein At5g53070, PFAM = PF01281)' T '29.2.1.1.3.2.9' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L9' 'niben101scf00268_532515-541803' '(at5g53070 : 211.0) Ribosomal protein L9/RNase H1; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9 (InterPro:IPR000244), Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Ribosomal protein L9, N-terminal (InterPro:IPR020070), Ribosomal protein L9, C-terminal (InterPro:IPR020069); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39807 : 102.0) no description available & (reliability: 422.0) & (original description: Putative At5g53070, Description = Putative uncharacterized protein At5g53070, PFAM = PF01281)' T '29.2.1.1.3.2.10' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L10' '' '' '29.2.1.1.3.2.11' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L11' '' '' '29.2.1.1.3.2.12' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L12' 'niben044scf00004415ctg004_13502-15965' '(at4g37660 : 129.0) Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (TAIR:AT1G70190.2); Has 8368 Blast hits to 8368 proteins in 2737 species: Archae - 0; Bacteria - 5618; Metazoa - 193; Fungi - 132; Plants - 255; Viruses - 0; Other Eukaryotes - 2170 (source: NCBI BLink). & (gnl|cdd|36927 : 121.0) no description available & (reliability: 258.0) & (original description: Putative rplL, Description = 50S ribosomal protein L7/L12, PFAM = PF00542)' T '29.2.1.1.3.2.12' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L12' 'niben101scf04607_250616-252896' '(at4g37660 : 130.0) Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (TAIR:AT1G70190.2); Has 8368 Blast hits to 8368 proteins in 2737 species: Archae - 0; Bacteria - 5618; Metazoa - 193; Fungi - 132; Plants - 255; Viruses - 0; Other Eukaryotes - 2170 (source: NCBI BLink). & (gnl|cdd|36927 : 124.0) no description available & (gnl|cdd|80553 : 82.5) no description available & (reliability: 260.0) & (original description: Putative RM12, Description = RM12, ribosomal protein 12 mitochondrial large ribosomal subunit, PFAM = PF00542)' T '29.2.1.1.3.2.13' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L13' '' '' '29.2.1.1.3.2.14' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L14' 'niben101scf02497_99984-104016' '(at5g46160 : 192.0) Ribosomal protein L14p/L23e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14b/L23e (InterPro:IPR000218), Ribosomal protein L14, bacterial-type (InterPro:IPR005745), Ribosomal protein L14 conserved site (InterPro:IPR019972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14p/L23e family protein (TAIR:AT1G17560.1); Has 9606 Blast hits to 9606 proteins in 3255 species: Archae - 313; Bacteria - 5457; Metazoa - 346; Fungi - 288; Plants - 818; Viruses - 0; Other Eukaryotes - 2384 (source: NCBI BLink). & (gnl|cdd|81625 : 157.0) no description available & (gnl|cdd|36119 : 124.0) no description available & (q9tl22|rk14_nepol : 112.0) Chloroplast 50S ribosomal protein L14 - Nephroselmis olivacea & (reliability: 384.0) & (original description: Putative HLP, Description = 50S ribosomal protein HLP, mitochondrial, PFAM = PF00238)' T '29.2.1.1.3.2.15' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L15' 'niben044scf00032046ctg001_1425-3859' '(gnl|cdd|81651 : 107.0) no description available & (gnl|cdd|36064 : 85.4) no description available & (at5g64670 : 80.5) Ribosomal protein L18e/L15 superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, large ribosomal subunit; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L15, bacterial-type (InterPro:IPR005749); BEST Arabidopsis thaliana protein match is: ribosomal protein L15 (TAIR:AT3G25920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative rplO, Description = 50S ribosomal protein L15, PFAM = PF00828)' T '29.2.1.1.3.2.15' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L15' 'niben101scf06087_178016-190756' '(at5g64670 : 288.0) Ribosomal protein L18e/L15 superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, large ribosomal subunit; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L15, bacterial-type (InterPro:IPR005749); BEST Arabidopsis thaliana protein match is: ribosomal protein L15 (TAIR:AT3G25920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36064 : 206.0) no description available & (gnl|cdd|81651 : 152.0) no description available & (reliability: 576.0) & (original description: Putative rplO, Description = 50S ribosomal protein L15, PFAM = PF00828)' T '29.2.1.1.3.2.17' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L17' 'niben101scf08684_25364-34127' '(at5g64650 : 226.0) Ribosomal protein L17 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L17 (InterPro:IPR000456); BEST Arabidopsis thaliana protein match is: Ribosomal protein L17 family protein (TAIR:AT5G09770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38490 : 156.0) no description available & (gnl|cdd|81650 : 155.0) no description available & (o80363|rk17_tobac : 108.0) 50S ribosomal protein L17, chloroplast precursor (CL17) - Nicotiana tabacum (Common tobacco) & (reliability: 452.0) & (original description: Putative rplQ, Description = 50S ribosomal protein L17, PFAM = PF01196)' T '29.2.1.1.3.2.18' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L18' 'nbv0.3scaffold4889_42944-47909' '(at3g20230 : 220.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT1G08845.2); Has 1330 Blast hits to 1330 proteins in 478 species: Archae - 0; Bacteria - 978; Metazoa - 36; Fungi - 0; Plants - 142; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative PGSC0003DMG400001680, Description = Ribosomal L18p/L5e family protein, PFAM = PF00861)' T '29.2.1.1.3.2.18' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L18' 'nbv0.5scaffold434_180871-185063' '(at3g20230 : 212.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT1G08845.2); Has 1330 Blast hits to 1330 proteins in 478 species: Archae - 0; Bacteria - 978; Metazoa - 36; Fungi - 0; Plants - 142; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (reliability: 424.0) & (original description: Putative At3g20230, Description = Ribosomal L18p/L5e family protein, PFAM = PF00861)' T '29.2.1.1.3.2.18' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L18' 'nbv0.5scaffold6143_49325-53797' '(at3g20230 : 220.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT1G08845.2); Has 1330 Blast hits to 1330 proteins in 478 species: Archae - 0; Bacteria - 978; Metazoa - 36; Fungi - 0; Plants - 142; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative At3g20230, Description = AT3G20230 protein, PFAM = PF00861)' T '29.2.1.1.3.2.18' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L18' 'niben101scf02011_501796-504149' '(at5g27820 : 125.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT3G20230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative LOC100285735, Description = 50S ribosomal protein L18, PFAM = PF00861)' T '29.2.1.1.3.2.18' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L18' 'niben101scf16114_177917-180270' '(at5g27820 : 119.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT3G20230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative LOC100285735, Description = 50S ribosomal protein L18, PFAM = PF00861)' T '29.2.1.1.3.2.19' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L19' 'niben101scf00574_1113943-1122636' '(at4g11630 : 208.0) Ribosomal protein L19 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19 (InterPro:IPR001857); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19 family protein (TAIR:AT5G11750.1); Has 7944 Blast hits to 7944 proteins in 2668 species: Archae - 0; Bacteria - 5364; Metazoa - 112; Fungi - 56; Plants - 151; Viruses - 0; Other Eukaryotes - 2261 (source: NCBI BLink). & (gnl|cdd|36911 : 155.0) no description available & (p82413|rk19_spiol : 128.0) 50S ribosomal protein L19, chloroplast precursor (CL19) - Spinacia oleracea (Spinach) & (gnl|cdd|81533 : 105.0) no description available & (reliability: 416.0) & (original description: Putative rplS, Description = 50S ribosomal protein L19, PFAM = PF01245)' T '29.2.1.1.3.2.20' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L20' 'nbv0.3scaffold10577_36438-47377' '(at1g16740 : 187.0) Ribosomal protein L20; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L20 (InterPro:IPR005813); BEST Arabidopsis thaliana protein match is: ribosomal protein L20 (TAIR:ATCG00660.1); Has 8162 Blast hits to 8162 proteins in 2777 species: Archae - 0; Bacteria - 5193; Metazoa - 126; Fungi - 0; Plants - 621; Viruses - 0; Other Eukaryotes - 2222 (source: NCBI BLink). & (gnl|cdd|81464 : 141.0) no description available & (gnl|cdd|39905 : 137.0) no description available & (p56352|rk20_chlvu : 91.3) Chloroplast 50S ribosomal protein L20 - Chlorella vulgaris (Green alga) & (reliability: 374.0) & (original description: Putative rplT, Description = 50S ribosomal protein L20, PFAM = PF00453)' T '29.2.1.1.3.2.20' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L20' 'niben101scf00088_159207-164530' '(at1g16740 : 186.0) Ribosomal protein L20; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L20 (InterPro:IPR005813); BEST Arabidopsis thaliana protein match is: ribosomal protein L20 (TAIR:ATCG00660.1); Has 8162 Blast hits to 8162 proteins in 2777 species: Archae - 0; Bacteria - 5193; Metazoa - 126; Fungi - 0; Plants - 621; Viruses - 0; Other Eukaryotes - 2222 (source: NCBI BLink). & (gnl|cdd|81464 : 141.0) no description available & (gnl|cdd|39905 : 137.0) no description available & (p56352|rk20_chlvu : 91.3) Chloroplast 50S ribosomal protein L20 - Chlorella vulgaris (Green alga) & (reliability: 372.0) & (original description: Putative rplT, Description = 50S ribosomal protein L20, PFAM = PF00453)' T '29.2.1.1.3.2.22' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L22' '' '' '29.2.1.1.3.2.25' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L25' 'niben101scf06277_400881-406516' '(at5g66860 : 275.0) Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain; INVOLVED IN: translation; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Ribosomal protein L25, beta domain (InterPro:IPR020057), Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (InterPro:IPR011035); BEST Arabidopsis thaliana protein match is: Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (TAIR:AT4G23620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81663 : 105.0) no description available & (reliability: 550.0) & (original description: Putative At5g66860, Description = Putative uncharacterized protein At5g66860, PFAM = PF14693)' T '29.2.1.1.3.2.25' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L25' 'niben101scf07489_176101-180954' '(at5g66860 : 283.0) Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain; INVOLVED IN: translation; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Ribosomal protein L25, beta domain (InterPro:IPR020057), Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (InterPro:IPR011035); BEST Arabidopsis thaliana protein match is: Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (TAIR:AT4G23620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81663 : 108.0) no description available & (reliability: 566.0) & (original description: Putative At5g66860, Description = Putative uncharacterized protein At5g66860, PFAM = PF14693;PF01386)' T '29.2.1.1.3.2.28' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L28' 'nbv0.3scaffold48330_1-7220' '(at4g31460 : 234.0) Ribosomal L28 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L28 (InterPro:IPR001383); Has 1063 Blast hits to 1063 proteins in 348 species: Archae - 0; Bacteria - 428; Metazoa - 98; Fungi - 129; Plants - 40; Viruses - 0; Other Eukaryotes - 368 (source: NCBI BLink). & (gnl|cdd|38488 : 177.0) no description available & (reliability: 468.0) & (original description: Putative MRPL28, Description = Putative mitochondrial ribosomal protein L28, PFAM = PF00830)' T '29.2.1.1.3.2.28' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L28' 'niben101scf08729_353792-361509' '(at4g31460 : 236.0) Ribosomal L28 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L28 (InterPro:IPR001383); Has 1063 Blast hits to 1063 proteins in 348 species: Archae - 0; Bacteria - 428; Metazoa - 98; Fungi - 129; Plants - 40; Viruses - 0; Other Eukaryotes - 368 (source: NCBI BLink). & (gnl|cdd|38488 : 177.0) no description available & (reliability: 472.0) & (original description: Putative MRPL28, Description = Putative mitochondrial ribosomal protein L28, PFAM = PF00830)' T '29.2.1.1.3.2.30' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L30' 'niben101scf01125_56223-61830' '(at5g55140 : 136.0) ribosomal protein L30 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, bacterial-type (InterPro:IPR005996), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative RPL30, Description = Ribosomal protein L30 family protein, PFAM = PF00327)' T '29.2.1.1.3.2.30' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L30' 'niben101scf01125_56378-58837' '(at5g55140 : 139.0) ribosomal protein L30 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, bacterial-type (InterPro:IPR005996), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative RPL30, Description = Ribosomal protein L30 family protein, PFAM = PF00327)' T '29.2.1.1.3.2.30' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L30' 'niben101scf02156_1453907-1456014' '(at5g55140 : 135.0) ribosomal protein L30 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, bacterial-type (InterPro:IPR005996), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative RPL30, Description = Ribosomal protein L30 family protein, PFAM = PF00327)' T '29.2.1.1.3.2.30' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L30' 'niben101scf03076_268888-276655' '(at5g55140 : 134.0) ribosomal protein L30 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, bacterial-type (InterPro:IPR005996), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative RPL30, Description = Ribosomal protein L30 family protein, PFAM = PF00327)' T '29.2.1.1.3.2.32' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L32' 'nbv0.3scaffold25728_9518-15509' '(at1g26740 : 119.0) Ribosomal L32p protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: large ribosomal subunit; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L32p (InterPro:IPR002677); BEST Arabidopsis thaliana protein match is: Ribosomal L32p protein family (TAIR:AT1G69485.1); Has 123 Blast hits to 123 proteins in 51 species: Archae - 0; Bacteria - 41; Metazoa - 0; Fungi - 21; Plants - 49; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative RPL32pA, Description = 50S ribosomal protein L32pA, PFAM = PF01783)' T '29.2.1.1.3.2.32' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L32' 'niben101scf04082_5194-17727' '(at1g26740 : 112.0) Ribosomal L32p protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: large ribosomal subunit; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L32p (InterPro:IPR002677); BEST Arabidopsis thaliana protein match is: Ribosomal L32p protein family (TAIR:AT1G69485.1); Has 123 Blast hits to 123 proteins in 51 species: Archae - 0; Bacteria - 41; Metazoa - 0; Fungi - 21; Plants - 49; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative RPL32pA, Description = 50S ribosomal protein L32pA, PFAM = PF01783)' T '29.2.1.1.3.2.32' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L32' 'niben101scf05712_270568-276559' '(at1g26740 : 106.0) Ribosomal L32p protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: large ribosomal subunit; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L32p (InterPro:IPR002677); BEST Arabidopsis thaliana protein match is: Ribosomal L32p protein family (TAIR:AT1G69485.1); Has 123 Blast hits to 123 proteins in 51 species: Archae - 0; Bacteria - 41; Metazoa - 0; Fungi - 21; Plants - 49; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative rpl32, Description = Ribosomal L32p protein family, PFAM = PF01783)' T '29.2.1.1.3.2.33' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L33' '' '' '29.2.1.1.3.2.34' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L34' 'niben101scf00870_1782023-1786571' '(at3g13882 : 124.0) Ribosomal protein L34; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34 (InterPro:IPR000271), Ribosomal protein L34, conserved site (InterPro:IPR020939); Has 5121 Blast hits to 5121 proteins in 2273 species: Archae - 0; Bacteria - 4770; Metazoa - 9; Fungi - 67; Plants - 39; Viruses - 0; Other Eukaryotes - 236 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative rpmH, Description = 50S ribosomal protein L34, PFAM = PF00468)' T '29.2.1.1.3.2.35' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L35' 'nbv0.3scaffold45769_2502-9541' '(at5g45590 : 115.0) Ribosomal protein L35; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L35 (InterPro:IPR021137); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative At5g45590, Description = Putative uncharacterized protein At5g45590, PFAM = PF01632)' T '29.2.1.1.3.2.35' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L35' 'niben101scf00261_236337-242925' '(at5g45590 : 106.0) Ribosomal protein L35; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L35 (InterPro:IPR021137); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative At5g45590, Description = Putative uncharacterized protein At5g45590, PFAM = PF01632)' T '29.2.1.1.3.2.35' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L35' 'niben101scf01166_1107252-1112721' '(at4g23620 : 312.0) Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain; FUNCTIONS IN: cobalt ion binding, zinc ion binding; INVOLVED IN: translation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L25, beta domain (InterPro:IPR020057), Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (InterPro:IPR011035); BEST Arabidopsis thaliana protein match is: Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (TAIR:AT5G66860.1). & (gnl|cdd|81663 : 108.0) no description available & (reliability: 624.0) & (original description: Putative BnaA08g15030D, Description = BnaA08g15030D protein, PFAM = PF01386;PF14693)' T '29.2.1.1.3.2.35' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L35' 'niben101scf09742_121201-128306' '(p23326|rk35_spiol : 94.4) 50S ribosomal protein L35, chloroplast precursor (CL35) - Spinacia oleracea (Spinach) & (at2g24090 : 89.0) Ribosomal protein L35; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L35, conserved site (InterPro:IPR018265), Ribosomal protein L35, non-mitochondrial (InterPro:IPR001706), Ribosomal protein L35 (InterPro:IPR021137); Has 5391 Blast hits to 5391 proteins in 1946 species: Archae - 0; Bacteria - 4062; Metazoa - 6; Fungi - 2; Plants - 66; Viruses - 0; Other Eukaryotes - 1255 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative RPL35, Description = 50S ribosomal protein L35, chloroplastic, PFAM = PF01632)' T '29.2.1.1.3.2.36' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L36' 'niben101scf01233_71267-97926' '(at5g20180 : 102.0) Ribosomal protein L36; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L36 (InterPro:IPR000473); Has 4494 Blast hits to 4494 proteins in 2031 species: Archae - 0; Bacteria - 3621; Metazoa - 52; Fungi - 76; Plants - 607; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative rpmJ, Description = 50S ribosomal protein L36, PFAM = PF00444)' T '29.2.1.1.3.2.57' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L5/L7' '' '' '29.2.1.1.3.2.99' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.unknown' '' '' '29.2.1.1.3.2.510' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L10A' 'niben044scf00013207ctg001_2680-6993' '(at1g08360 : 339.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G27530.2); Has 3821 Blast hits to 3820 proteins in 1247 species: Archae - 280; Bacteria - 1757; Metazoa - 462; Fungi - 186; Plants - 511; Viruses - 0; Other Eukaryotes - 625 (source: NCBI BLink). & (gnl|cdd|36783 : 284.0) no description available & (q9sw75|rl10a_chlre : 253.0) 60S ribosomal protein L10a - Chlamydomonas reinhardtii & (gnl|cdd|84952 : 141.0) no description available & (reliability: 678.0) & (original description: Putative r10a, Description = Ribosomal protein, PFAM = PF00687)' T '29.2.1.1.3.2.510' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L10A' 'niben044scf00038689ctg002_34281-38257' '(at1g08360 : 333.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G27530.2); Has 3821 Blast hits to 3820 proteins in 1247 species: Archae - 280; Bacteria - 1757; Metazoa - 462; Fungi - 186; Plants - 511; Viruses - 0; Other Eukaryotes - 625 (source: NCBI BLink). & (gnl|cdd|36783 : 279.0) no description available & (q9sw75|rl10a_chlre : 247.0) 60S ribosomal protein L10a - Chlamydomonas reinhardtii & (gnl|cdd|84952 : 141.0) no description available & (reliability: 666.0) & (original description: Putative r10a, Description = Ribosomal protein, PFAM = PF00687)' T '29.2.1.1.3.2.510' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L10A' 'niben101scf00085_307657-312830' '(at1g08360 : 335.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G27530.2); Has 3821 Blast hits to 3820 proteins in 1247 species: Archae - 280; Bacteria - 1757; Metazoa - 462; Fungi - 186; Plants - 511; Viruses - 0; Other Eukaryotes - 625 (source: NCBI BLink). & (gnl|cdd|36783 : 279.0) no description available & (q9sw75|rl10a_chlre : 249.0) 60S ribosomal protein L10a - Chlamydomonas reinhardtii & (gnl|cdd|84952 : 140.0) no description available & (reliability: 670.0) & (original description: Putative r10a, Description = Ribosomal protein, PFAM = PF00687)' T '29.2.1.1.3.2.510' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L10A' 'niben101scf02510_433985-438094' '(at1g08360 : 335.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G27530.2); Has 3821 Blast hits to 3820 proteins in 1247 species: Archae - 280; Bacteria - 1757; Metazoa - 462; Fungi - 186; Plants - 511; Viruses - 0; Other Eukaryotes - 625 (source: NCBI BLink). & (gnl|cdd|36783 : 281.0) no description available & (q9sw75|rl10a_chlre : 248.0) 60S ribosomal protein L10a - Chlamydomonas reinhardtii & (gnl|cdd|84952 : 140.0) no description available & (reliability: 670.0) & (original description: Putative r10a, Description = Ribosomal protein, PFAM = PF00687)' T '29.2.1.1.3.2.510' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L10A' 'niben101scf04134_218521-222713' '(at5g22440 : 338.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT1G08360.1); Has 4875 Blast hits to 4874 proteins in 1649 species: Archae - 280; Bacteria - 2611; Metazoa - 459; Fungi - 187; Plants - 522; Viruses - 0; Other Eukaryotes - 816 (source: NCBI BLink). & (gnl|cdd|36783 : 284.0) no description available & (q9sw75|rl10a_chlre : 253.0) 60S ribosomal protein L10a - Chlamydomonas reinhardtii & (gnl|cdd|84952 : 141.0) no description available & (reliability: 674.0) & (original description: Putative r10a, Description = Ribosomal protein, PFAM = PF00687)' T '29.2.1.1.3.2.1015' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L10/15' '' '' '29.2.1.1.3.2.1185' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L18/L5' 'niben101scf04549_191305-193727' '(at3g45020 : 183.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484); Has 362 Blast hits to 362 proteins in 135 species: Archae - 0; Bacteria - 259; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative BnaAnng03580D, Description = BnaAnng03580D protein, PFAM = PF00861)' T '29.2.1.1.3.2.1712' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L7/L12' 'niben101scf00491_526340-531662' '(at1g68660 : 220.0) Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein catabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Adaptor protein ClpS, core (InterPro:IPR003769), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719); Has 122 Blast hits to 122 proteins in 49 species: Archae - 0; Bacteria - 62; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|84417 : 91.9) no description available & (reliability: 440.0) & (original description: Putative CPLS1, Description = ATP-dependent Clp protease adapter protein CLPS1, chloroplastic, PFAM = PF02617)' T '29.2.1.1.3.99' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.unknown' '' '' '29.2.1.1.4' 'protein.synthesis.ribosomal protein.prokaryotic.non-organellar' '' '' '29.2.1.1.4.1' 'protein.synthesis.ribosomal protein.prokaryotic.non-organellar.30S subunit' '' '' '29.2.1.1.4.2' 'protein.synthesis.ribosomal protein.prokaryotic.non-organellar.50S subunit' '' '' '29.2.1.2' 'protein.synthesis.ribosomal protein.eukaryotic' '' '' '29.2.1.2.1' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit' '' '' '29.2.1.2.1.2' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S2' 'niben044scf00010382ctg003_1-3552' '(at1g58684 : 404.0) Ribosomal protein S5 family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, cell wall, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, eukaryotic/archaeal (InterPro:IPR005711), Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G59359.1); Has 10014 Blast hits to 9456 proteins in 2909 species: Archae - 262; Bacteria - 5182; Metazoa - 1330; Fungi - 465; Plants - 259; Viruses - 14; Other Eukaryotes - 2502 (source: NCBI BLink). & (gnl|cdd|36095 : 342.0) no description available & (gnl|cdd|81274 : 233.0) no description available & (reliability: 808.0) & (original description: Putative RPS2A, Description = 40S ribosomal protein S2-1, PFAM = PF00333;PF03719)' T '29.2.1.2.1.2' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S2' 'niben101scf01491_297475-301613' '(at1g58380 : 405.0) XW6; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, plasma membrane, chloroplast, membrane; EXPRESSED IN: guard cell, pollen tube, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, eukaryotic/archaeal (InterPro:IPR005711), Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G59359.1); Has 10515 Blast hits to 9714 proteins in 2923 species: Archae - 262; Bacteria - 5279; Metazoa - 1538; Fungi - 549; Plants - 325; Viruses - 26; Other Eukaryotes - 2536 (source: NCBI BLink). & (gnl|cdd|36095 : 341.0) no description available & (gnl|cdd|81274 : 237.0) no description available & (reliability: 810.0) & (original description: Putative RPS2A, Description = 40S ribosomal protein S2-1, PFAM = PF03719;PF00333)' T '29.2.1.2.1.2' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S2' 'niben101scf02637_179285-182714' '(at1g58684 : 404.0) Ribosomal protein S5 family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, cell wall, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, eukaryotic/archaeal (InterPro:IPR005711), Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G59359.1); Has 10014 Blast hits to 9456 proteins in 2909 species: Archae - 262; Bacteria - 5182; Metazoa - 1330; Fungi - 465; Plants - 259; Viruses - 14; Other Eukaryotes - 2502 (source: NCBI BLink). & (gnl|cdd|36095 : 342.0) no description available & (gnl|cdd|81274 : 232.0) no description available & (reliability: 808.0) & (original description: Putative rp29, Description = 40S ribosomal protein S2, PFAM = PF03719;PF00333)' T '29.2.1.2.1.2' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S2' 'niben101scf02637_227131-230776' '(at1g58380 : 408.0) XW6; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, plasma membrane, chloroplast, membrane; EXPRESSED IN: guard cell, pollen tube, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, eukaryotic/archaeal (InterPro:IPR005711), Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G59359.1); Has 10515 Blast hits to 9714 proteins in 2923 species: Archae - 262; Bacteria - 5279; Metazoa - 1538; Fungi - 549; Plants - 325; Viruses - 26; Other Eukaryotes - 2536 (source: NCBI BLink). & (gnl|cdd|36095 : 342.0) no description available & (gnl|cdd|81274 : 233.0) no description available & (reliability: 816.0) & (original description: Putative RPS2A, Description = 40S ribosomal protein S2-1, PFAM = PF03719;PF00333)' T '29.2.1.2.1.2' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S2' 'niben101scf09467_316636-320531' '(at1g58684 : 390.0) Ribosomal protein S5 family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, cell wall, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, eukaryotic/archaeal (InterPro:IPR005711), Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G59359.1); Has 10014 Blast hits to 9456 proteins in 2909 species: Archae - 262; Bacteria - 5182; Metazoa - 1330; Fungi - 465; Plants - 259; Viruses - 14; Other Eukaryotes - 2502 (source: NCBI BLink). & (gnl|cdd|36095 : 329.0) no description available & (gnl|cdd|81274 : 220.0) no description available & (reliability: 780.0) & (original description: Putative cdk9, Description = 40S ribosomal protein S2, PFAM = PF03719;PF00333)' T '29.2.1.2.1.2' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S2' 'niben101scf18396_60422-64952' '(at1g58380 : 405.0) XW6; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, plasma membrane, chloroplast, membrane; EXPRESSED IN: guard cell, pollen tube, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, eukaryotic/archaeal (InterPro:IPR005711), Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G59359.1); Has 10515 Blast hits to 9714 proteins in 2923 species: Archae - 262; Bacteria - 5279; Metazoa - 1538; Fungi - 549; Plants - 325; Viruses - 26; Other Eukaryotes - 2536 (source: NCBI BLink). & (gnl|cdd|36095 : 340.0) no description available & (gnl|cdd|81274 : 234.0) no description available & (reliability: 810.0) & (original description: Putative RPS2, Description = 40S ribosomal protein S2, PFAM = PF03719;PF00333)' T '29.2.1.2.1.3' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S3' 'nbv0.5scaffold6858_30031-34889' '(at5g35530 : 385.0) Ribosomal protein S3 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to salt stress, translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, prokaryotic type (InterPro:IPR009019), K Homology, type 2 (InterPro:IPR004044), K Homology (InterPro:IPR004087), Ribosomal protein S3, C-terminal (InterPro:IPR001351), Ribosomal protein S3, eukaryotic/archaeal (InterPro:IPR005703); BEST Arabidopsis thaliana protein match is: Ribosomal protein S3 family protein (TAIR:AT2G31610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38391 : 380.0) no description available & (gnl|cdd|30441 : 160.0) no description available & (reliability: 770.0) & (original description: Putative rps3, Description = 40S ribosomal protein S3, PFAM = PF00189;PF07650)' T '29.2.1.2.1.3' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S3' 'niben101scf02790_523981-543874' '(at5g35530 : 381.0) Ribosomal protein S3 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to salt stress, translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, prokaryotic type (InterPro:IPR009019), K Homology, type 2 (InterPro:IPR004044), K Homology (InterPro:IPR004087), Ribosomal protein S3, C-terminal (InterPro:IPR001351), Ribosomal protein S3, eukaryotic/archaeal (InterPro:IPR005703); BEST Arabidopsis thaliana protein match is: Ribosomal protein S3 family protein (TAIR:AT2G31610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38391 : 378.0) no description available & (gnl|cdd|30441 : 157.0) no description available & (reliability: 762.0) & (original description: Putative RPS3A, Description = 40S ribosomal protein S3-1, PFAM = PF07650;PF00189)' T '29.2.1.2.1.3' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S3' 'niben101scf05002_441561-446425' '(at5g35530 : 390.0) Ribosomal protein S3 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to salt stress, translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, prokaryotic type (InterPro:IPR009019), K Homology, type 2 (InterPro:IPR004044), K Homology (InterPro:IPR004087), Ribosomal protein S3, C-terminal (InterPro:IPR001351), Ribosomal protein S3, eukaryotic/archaeal (InterPro:IPR005703); BEST Arabidopsis thaliana protein match is: Ribosomal protein S3 family protein (TAIR:AT2G31610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38391 : 386.0) no description available & (gnl|cdd|30441 : 162.0) no description available & (reliability: 780.0) & (original description: Putative RPS3A, Description = 40S ribosomal protein S3-1, PFAM = PF07650;PF00189)' T '29.2.1.2.1.4' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S4' 'niben044scf00033090ctg001_1-3078' '(p46300|rs4_soltu : 466.0) 40S ribosomal protein S4 - Solanum tuberosum (Potato) & (at5g07090 : 449.0) Ribosomal protein S4 (RPS4A) family protein; FUNCTIONS IN: structural constituent of ribosome, protein binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4e, central (InterPro:IPR013845), KOW (InterPro:IPR005824), RNA-binding S4 (InterPro:IPR002942), Ribosomal protein S4e, N-terminal (InterPro:IPR013843), Ribosomal protein S4e (InterPro:IPR000876); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (RPS4A) family protein (TAIR:AT5G58420.1); Has 1386 Blast hits to 1386 proteins in 448 species: Archae - 256; Bacteria - 2; Metazoa - 428; Fungi - 188; Plants - 271; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink). & (gnl|cdd|35599 : 413.0) no description available & (gnl|cdd|31660 : 298.0) no description available & (reliability: 898.0) & (original description: Putative RPS4, Description = 40S ribosomal protein S4, PFAM = PF16121;PF00467;PF00900;PF08071)' T '29.2.1.2.1.4' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S4' 'niben101scf02857_305609-309443' '(p46300|rs4_soltu : 466.0) 40S ribosomal protein S4 - Solanum tuberosum (Potato) & (at5g07090 : 448.0) Ribosomal protein S4 (RPS4A) family protein; FUNCTIONS IN: structural constituent of ribosome, protein binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4e, central (InterPro:IPR013845), KOW (InterPro:IPR005824), RNA-binding S4 (InterPro:IPR002942), Ribosomal protein S4e, N-terminal (InterPro:IPR013843), Ribosomal protein S4e (InterPro:IPR000876); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (RPS4A) family protein (TAIR:AT5G58420.1); Has 1386 Blast hits to 1386 proteins in 448 species: Archae - 256; Bacteria - 2; Metazoa - 428; Fungi - 188; Plants - 271; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink). & (gnl|cdd|35599 : 412.0) no description available & (gnl|cdd|31660 : 296.0) no description available & (reliability: 896.0) & (original description: Putative RPS4, Description = 40S ribosomal protein S4, PFAM = PF00900;PF00467;PF16121;PF08071)' T '29.2.1.2.1.4' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S4' 'niben101scf03156_47484-51103' '(p46300|rs4_soltu : 469.0) 40S ribosomal protein S4 - Solanum tuberosum (Potato) & (at5g58420 : 452.0) Ribosomal protein S4 (RPS4A) family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4e, central (InterPro:IPR013845), Ribosomal protein S4e, N-terminal, conserved site (InterPro:IPR018199), KOW (InterPro:IPR005824), RNA-binding S4 (InterPro:IPR002942), Ribosomal protein S4e, N-terminal (InterPro:IPR013843), Ribosomal protein S4e (InterPro:IPR000876); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (RPS4A) family protein (TAIR:AT5G07090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35599 : 415.0) no description available & (gnl|cdd|31660 : 301.0) no description available & (reliability: 904.0) & (original description: Putative RPS4, Description = 40S ribosomal protein S4, PFAM = PF00467;PF08071;PF00900;PF16121)' T '29.2.1.2.1.4' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S4' 'niben101scf08698_256432-259886' '(p46300|rs4_soltu : 470.0) 40S ribosomal protein S4 - Solanum tuberosum (Potato) & (at5g58420 : 452.0) Ribosomal protein S4 (RPS4A) family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4e, central (InterPro:IPR013845), Ribosomal protein S4e, N-terminal, conserved site (InterPro:IPR018199), KOW (InterPro:IPR005824), RNA-binding S4 (InterPro:IPR002942), Ribosomal protein S4e, N-terminal (InterPro:IPR013843), Ribosomal protein S4e (InterPro:IPR000876); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (RPS4A) family protein (TAIR:AT5G07090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35599 : 413.0) no description available & (gnl|cdd|31660 : 301.0) no description available & (reliability: 904.0) & (original description: Putative RPS4, Description = 40S ribosomal protein S4, PFAM = PF01479;PF00900;PF08071;PF00467;PF16121)' T '29.2.1.2.1.4' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S4' 'niben101scf14717_71963-75714' '(p46300|rs4_soltu : 466.0) 40S ribosomal protein S4 - Solanum tuberosum (Potato) & (at5g58420 : 451.0) Ribosomal protein S4 (RPS4A) family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4e, central (InterPro:IPR013845), Ribosomal protein S4e, N-terminal, conserved site (InterPro:IPR018199), KOW (InterPro:IPR005824), RNA-binding S4 (InterPro:IPR002942), Ribosomal protein S4e, N-terminal (InterPro:IPR013843), Ribosomal protein S4e (InterPro:IPR000876); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (RPS4A) family protein (TAIR:AT5G07090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35599 : 418.0) no description available & (gnl|cdd|31660 : 301.0) no description available & (reliability: 902.0) & (original description: Putative RPS4, Description = 40S ribosomal protein S4, PFAM = PF08071;PF00467;PF16121;PF00900)' T '29.2.1.2.1.4' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S4' 'niben101scf17473_47906-52384' '(p46300|rs4_soltu : 468.0) 40S ribosomal protein S4 - Solanum tuberosum (Potato) & (at5g58420 : 452.0) Ribosomal protein S4 (RPS4A) family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4e, central (InterPro:IPR013845), Ribosomal protein S4e, N-terminal, conserved site (InterPro:IPR018199), KOW (InterPro:IPR005824), RNA-binding S4 (InterPro:IPR002942), Ribosomal protein S4e, N-terminal (InterPro:IPR013843), Ribosomal protein S4e (InterPro:IPR000876); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (RPS4A) family protein (TAIR:AT5G07090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35599 : 415.0) no description available & (gnl|cdd|31660 : 300.0) no description available & (reliability: 904.0) & (original description: Putative RPS4, Description = 40S ribosomal protein S4, PFAM = PF08071;PF00900;PF00467;PF16121)' T '29.2.1.2.1.4' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S4' 'niben101scf32851_27378-31413' '(p46300|rs4_soltu : 473.0) 40S ribosomal protein S4 - Solanum tuberosum (Potato) & (at5g58420 : 455.0) Ribosomal protein S4 (RPS4A) family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4e, central (InterPro:IPR013845), Ribosomal protein S4e, N-terminal, conserved site (InterPro:IPR018199), KOW (InterPro:IPR005824), RNA-binding S4 (InterPro:IPR002942), Ribosomal protein S4e, N-terminal (InterPro:IPR013843), Ribosomal protein S4e (InterPro:IPR000876); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (RPS4A) family protein (TAIR:AT5G07090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35599 : 417.0) no description available & (gnl|cdd|31660 : 307.0) no description available & (reliability: 910.0) & (original description: Putative RPS4, Description = 40S ribosomal protein S4, PFAM = PF08071;PF01479;PF00467;PF16121;PF00900)' T '29.2.1.2.1.5' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S5' 'niben101scf00749_436970-441209' '(o65731|rs5_cicar : 328.0) 40S ribosomal protein S5 (Fragment) - Cicer arietinum (Chickpea) (Garbanzo) & (at2g37270 : 326.0) One of two genes encoding the ribosomal protein S5. Expressed at a lower level compared to ATRPS5A.; ribosomal protein 5B (RPS5B); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: fruit, cultured cell, pollen tube, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7, conserved site (InterPro:IPR020606), Ribosomal protein S7, eukaryotic/archaeal (InterPro:IPR005716), Ribosomal protein S7 (InterPro:IPR000235); BEST Arabidopsis thaliana protein match is: ribosomal protein 5A (TAIR:AT3G11940.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38501 : 256.0) no description available & (gnl|cdd|81264 : 227.0) no description available & (reliability: 652.0) & (original description: Putative RPS5, Description = 40S ribosomal protein S5, PFAM = PF00177)' T '29.2.1.2.1.5' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S5' 'niben101scf04288_117136-121374' '(o65731|rs5_cicar : 328.0) 40S ribosomal protein S5 (Fragment) - Cicer arietinum (Chickpea) (Garbanzo) & (at2g37270 : 326.0) One of two genes encoding the ribosomal protein S5. Expressed at a lower level compared to ATRPS5A.; ribosomal protein 5B (RPS5B); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: fruit, cultured cell, pollen tube, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7, conserved site (InterPro:IPR020606), Ribosomal protein S7, eukaryotic/archaeal (InterPro:IPR005716), Ribosomal protein S7 (InterPro:IPR000235); BEST Arabidopsis thaliana protein match is: ribosomal protein 5A (TAIR:AT3G11940.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38501 : 256.0) no description available & (gnl|cdd|81264 : 227.0) no description available & (reliability: 652.0) & (original description: Putative RPS5, Description = 40S ribosomal protein S5, PFAM = PF00177)' T '29.2.1.2.1.5' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S5' 'niben101scf06848_1043366-1047179' '(o65731|rs5_cicar : 326.0) 40S ribosomal protein S5 (Fragment) - Cicer arietinum (Chickpea) (Garbanzo) & (at2g37270 : 325.0) One of two genes encoding the ribosomal protein S5. Expressed at a lower level compared to ATRPS5A.; ribosomal protein 5B (RPS5B); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: fruit, cultured cell, pollen tube, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7, conserved site (InterPro:IPR020606), Ribosomal protein S7, eukaryotic/archaeal (InterPro:IPR005716), Ribosomal protein S7 (InterPro:IPR000235); BEST Arabidopsis thaliana protein match is: ribosomal protein 5A (TAIR:AT3G11940.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38501 : 254.0) no description available & (gnl|cdd|81264 : 224.0) no description available & (reliability: 650.0) & (original description: Putative RPS5A, Description = 40S ribosomal protein S5-1, PFAM = PF00177)' T '29.2.1.2.1.5' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S5' 'niben101scf13379_39804-43714' '(o65731|rs5_cicar : 327.0) 40S ribosomal protein S5 (Fragment) - Cicer arietinum (Chickpea) (Garbanzo) & (at2g37270 : 326.0) One of two genes encoding the ribosomal protein S5. Expressed at a lower level compared to ATRPS5A.; ribosomal protein 5B (RPS5B); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: fruit, cultured cell, pollen tube, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7, conserved site (InterPro:IPR020606), Ribosomal protein S7, eukaryotic/archaeal (InterPro:IPR005716), Ribosomal protein S7 (InterPro:IPR000235); BEST Arabidopsis thaliana protein match is: ribosomal protein 5A (TAIR:AT3G11940.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38501 : 255.0) no description available & (gnl|cdd|81264 : 227.0) no description available & (reliability: 652.0) & (original description: Putative rps5, Description = Ribosomal protein S5, PFAM = PF00177)' T '29.2.1.2.1.6' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S6' 'niben044scf00000439ctg003_4156-8457' '(q9m3v8|rs6_aspof : 344.0) 40S ribosomal protein S6 - Asparagus officinalis (Garden asparagus) & (at4g31700 : 341.0) Encodes a putative ribosomal protein S6 (rps6a). RPS6A and RPS6B are fully redundant and essential during gametogenesis.; ribosomal protein S6 (RPS6); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: growth, translation; LOCATED IN: cytosolic small ribosomal subunit, plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S6e (InterPro:IPR001377); BEST Arabidopsis thaliana protein match is: Ribosomal protein S6e (TAIR:AT5G10360.1); Has 870 Blast hits to 868 proteins in 314 species: Archae - 19; Bacteria - 0; Metazoa - 402; Fungi - 166; Plants - 138; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink). & (gnl|cdd|36859 : 286.0) no description available & (gnl|cdd|64928 : 177.0) no description available & (reliability: 682.0) & (original description: Putative rps6, Description = 40S ribosomal protein S6, PFAM = PF01092)' T '29.2.1.2.1.6' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S6' 'niben101scf00360_118614-123028' '(q9m3v8|rs6_aspof : 336.0) 40S ribosomal protein S6 - Asparagus officinalis (Garden asparagus) & (at4g31700 : 334.0) Encodes a putative ribosomal protein S6 (rps6a). RPS6A and RPS6B are fully redundant and essential during gametogenesis.; ribosomal protein S6 (RPS6); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: growth, translation; LOCATED IN: cytosolic small ribosomal subunit, plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S6e (InterPro:IPR001377); BEST Arabidopsis thaliana protein match is: Ribosomal protein S6e (TAIR:AT5G10360.1); Has 870 Blast hits to 868 proteins in 314 species: Archae - 19; Bacteria - 0; Metazoa - 402; Fungi - 166; Plants - 138; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink). & (gnl|cdd|36859 : 287.0) no description available & (gnl|cdd|64928 : 177.0) no description available & (reliability: 668.0) & (original description: Putative rps6, Description = 40S ribosomal protein S6, PFAM = PF01092)' T '29.2.1.2.1.6' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S6' 'niben101scf00478_701729-705733' '(q9m3v8|rs6_aspof : 340.0) 40S ribosomal protein S6 - Asparagus officinalis (Garden asparagus) & (at5g10360 : 339.0) RPS6A and RPS6B are fully redundant and essential during gametogenesis.; embryo defective 3010 (EMB3010); CONTAINS InterPro DOMAIN/s: Ribosomal protein S6e (InterPro:IPR001377), Ribosomal protein S6e, conserved site (InterPro:IPR018282); BEST Arabidopsis thaliana protein match is: ribosomal protein S6 (TAIR:AT4G31700.1). & (gnl|cdd|36859 : 283.0) no description available & (gnl|cdd|64928 : 176.0) no description available & (reliability: 678.0) & (original description: Putative RPS6, Description = 40S ribosomal protein S6, PFAM = PF01092)' T '29.2.1.2.1.6' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S6' 'niben101scf03584_90449-94908' '(q9m3v8|rs6_aspof : 334.0) 40S ribosomal protein S6 - Asparagus officinalis (Garden asparagus) & (at5g10360 : 333.0) RPS6A and RPS6B are fully redundant and essential during gametogenesis.; embryo defective 3010 (EMB3010); CONTAINS InterPro DOMAIN/s: Ribosomal protein S6e (InterPro:IPR001377), Ribosomal protein S6e, conserved site (InterPro:IPR018282); BEST Arabidopsis thaliana protein match is: ribosomal protein S6 (TAIR:AT4G31700.1). & (gnl|cdd|36859 : 285.0) no description available & (gnl|cdd|64928 : 178.0) no description available & (reliability: 666.0) & (original description: Putative rps6, Description = 40S ribosomal protein S6, PFAM = PF01092)' T '29.2.1.2.1.7' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S7' 'niben101scf02881_37418-42023' '(q8lju5|rs7_orysa : 288.0) 40S ribosomal protein S7 - Oryza sativa (Rice) & (at1g48830 : 280.0) Ribosomal protein S7e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, cell wall, plasma membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7e (InterPro:IPR000554); BEST Arabidopsis thaliana protein match is: Ribosomal protein S7e family protein (TAIR:AT3G02560.2); Has 785 Blast hits to 785 proteins in 311 species: Archae - 0; Bacteria - 0; Metazoa - 354; Fungi - 147; Plants - 158; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (gnl|cdd|38530 : 259.0) no description available & (gnl|cdd|85337 : 207.0) no description available & (reliability: 560.0) & (original description: Putative rps7, Description = 40S ribosomal protein S7, PFAM = PF01251)' T '29.2.1.2.1.7' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S7' 'niben101scf05545_15362-19645' '(at1g48830 : 295.0) Ribosomal protein S7e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, cell wall, plasma membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7e (InterPro:IPR000554); BEST Arabidopsis thaliana protein match is: Ribosomal protein S7e family protein (TAIR:AT3G02560.2); Has 785 Blast hits to 785 proteins in 311 species: Archae - 0; Bacteria - 0; Metazoa - 354; Fungi - 147; Plants - 158; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (q9xet4|rs7_secce : 292.0) 40S ribosomal protein S7 - Secale cereale (Rye) & (gnl|cdd|38530 : 270.0) no description available & (gnl|cdd|85337 : 212.0) no description available & (reliability: 590.0) & (original description: Putative RPS7, Description = 40S ribosomal protein S7, PFAM = PF01251)' T '29.2.1.2.1.7' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S7' 'niben101scf11491_242902-246761' '(at1g48830 : 288.0) Ribosomal protein S7e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, cell wall, plasma membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7e (InterPro:IPR000554); BEST Arabidopsis thaliana protein match is: Ribosomal protein S7e family protein (TAIR:AT3G02560.2); Has 785 Blast hits to 785 proteins in 311 species: Archae - 0; Bacteria - 0; Metazoa - 354; Fungi - 147; Plants - 158; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (q9xet4|rs7_secce : 287.0) 40S ribosomal protein S7 - Secale cereale (Rye) & (gnl|cdd|38530 : 269.0) no description available & (gnl|cdd|85337 : 211.0) no description available & (reliability: 576.0) & (original description: Putative RPS7, Description = 40S ribosomal protein S7, PFAM = PF01251)' T '29.2.1.2.1.7' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S7' 'niben101scf12394_194510-198253' '(at1g48830 : 288.0) Ribosomal protein S7e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, cell wall, plasma membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7e (InterPro:IPR000554); BEST Arabidopsis thaliana protein match is: Ribosomal protein S7e family protein (TAIR:AT3G02560.2); Has 785 Blast hits to 785 proteins in 311 species: Archae - 0; Bacteria - 0; Metazoa - 354; Fungi - 147; Plants - 158; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (q8lju5|rs7_orysa : 285.0) 40S ribosomal protein S7 - Oryza sativa (Rice) & (gnl|cdd|38530 : 267.0) no description available & (gnl|cdd|85337 : 210.0) no description available & (reliability: 576.0) & (original description: Putative rps7, Description = 40S ribosomal protein S7, PFAM = PF01251)' T '29.2.1.2.1.8' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8' 'nbv0.3scaffold68213_2820-5818' '(q08069|rs8_maize : 149.0) 40S ribosomal protein S8 - Zea mays (Maize) & (gnl|cdd|38493 : 136.0) no description available & (at5g59240 : 131.0) Ribosomal protein S8e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e (InterPro:IPR001047), Ribosomal protein S8e, conserved site (InterPro:IPR018283), Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8e family protein (TAIR:AT5G20290.1); Has 1068 Blast hits to 1064 proteins in 429 species: Archae - 247; Bacteria - 0; Metazoa - 364; Fungi - 161; Plants - 120; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative rps8, Description = 40S ribosomal protein S8, PFAM = PF01201)' T '29.2.1.2.1.8' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8' 'nbv0.5scaffold1572_51751-54777' '(at5g06360 : 161.0) Ribosomal protein S8e family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38373 : 143.0) no description available & (reliability: 322.0) & (original description: Putative nsa2, Description = Ribosomal protein S8e, PFAM = )' T '29.2.1.2.1.8' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8' 'niben101scf00270_570981-576830' '(at5g06360 : 404.0) Ribosomal protein S8e family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38373 : 404.0) no description available & (gnl|cdd|32190 : 81.5) no description available & (reliability: 808.0) & (original description: Putative nsa2, Description = Ribosome biogenesis protein NSA2 homolog, PFAM = PF01201)' T '29.2.1.2.1.8' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8' 'niben101scf02756_38841-43799' '(q08069|rs8_maize : 288.0) 40S ribosomal protein S8 - Zea mays (Maize) & (gnl|cdd|38493 : 271.0) no description available & (at5g20290 : 270.0) Ribosomal protein S8e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e (InterPro:IPR001047), Ribosomal protein S8e, conserved site (InterPro:IPR018283), Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8e family protein (TAIR:AT5G59240.1); Has 1084 Blast hits to 1080 proteins in 433 species: Archae - 252; Bacteria - 1; Metazoa - 368; Fungi - 161; Plants - 120; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (gnl|cdd|85302 : 138.0) no description available & (reliability: 540.0) & (original description: Putative rps8, Description = 40S ribosomal protein S8, PFAM = PF01201)' T '29.2.1.2.1.8' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8' 'niben101scf04436_353315-357799' '(p49199|rs8_orysa : 292.0) 40S ribosomal protein S8 - Oryza sativa (Rice) & (at5g59240 : 280.0) Ribosomal protein S8e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e (InterPro:IPR001047), Ribosomal protein S8e, conserved site (InterPro:IPR018283), Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8e family protein (TAIR:AT5G20290.1); Has 1068 Blast hits to 1064 proteins in 429 species: Archae - 247; Bacteria - 0; Metazoa - 364; Fungi - 161; Plants - 120; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|38493 : 273.0) no description available & (gnl|cdd|85302 : 140.0) no description available & (reliability: 560.0) & (original description: Putative rps8, Description = 40S ribosomal protein S8, PFAM = PF01201)' T '29.2.1.2.1.8' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8' 'niben101scf04444_155213-160550' '(gnl|cdd|38493 : 270.0) no description available & (q08069|rs8_maize : 268.0) 40S ribosomal protein S8 - Zea mays (Maize) & (at5g59240 : 260.0) Ribosomal protein S8e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e (InterPro:IPR001047), Ribosomal protein S8e, conserved site (InterPro:IPR018283), Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8e family protein (TAIR:AT5G20290.1); Has 1068 Blast hits to 1064 proteins in 429 species: Archae - 247; Bacteria - 0; Metazoa - 364; Fungi - 161; Plants - 120; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|85302 : 138.0) no description available & (reliability: 520.0) & (original description: Putative rps8, Description = 40S ribosomal protein S8, PFAM = PF01201)' T '29.2.1.2.1.8' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8' 'niben101scf04551_181539-185560' '(q08069|rs8_maize : 274.0) 40S ribosomal protein S8 - Zea mays (Maize) & (gnl|cdd|38493 : 267.0) no description available & (at5g59240 : 248.0) Ribosomal protein S8e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e (InterPro:IPR001047), Ribosomal protein S8e, conserved site (InterPro:IPR018283), Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8e family protein (TAIR:AT5G20290.1); Has 1068 Blast hits to 1064 proteins in 429 species: Archae - 247; Bacteria - 0; Metazoa - 364; Fungi - 161; Plants - 120; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|85302 : 136.0) no description available & (reliability: 496.0) & (original description: Putative RPS8, Description = 40S ribosomal protein S8, PFAM = PF01201)' T '29.2.1.2.1.8' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8' 'niben101scf07428_150526-154993' '(p49199|rs8_orysa : 283.0) 40S ribosomal protein S8 - Oryza sativa (Rice) & (gnl|cdd|38493 : 265.0) no description available & (at5g20290 : 263.0) Ribosomal protein S8e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e (InterPro:IPR001047), Ribosomal protein S8e, conserved site (InterPro:IPR018283), Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8e family protein (TAIR:AT5G59240.1); Has 1084 Blast hits to 1080 proteins in 433 species: Archae - 252; Bacteria - 1; Metazoa - 368; Fungi - 161; Plants - 120; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (gnl|cdd|85302 : 138.0) no description available & (reliability: 526.0) & (original description: Putative rps8, Description = 40S ribosomal protein S8, PFAM = PF01201)' T '29.2.1.2.1.8' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8' 'niben101scf08447_174939-179590' '(q08069|rs8_maize : 293.0) 40S ribosomal protein S8 - Zea mays (Maize) & (gnl|cdd|38493 : 274.0) no description available & (at5g20290 : 273.0) Ribosomal protein S8e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e (InterPro:IPR001047), Ribosomal protein S8e, conserved site (InterPro:IPR018283), Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8e family protein (TAIR:AT5G59240.1); Has 1084 Blast hits to 1080 proteins in 433 species: Archae - 252; Bacteria - 1; Metazoa - 368; Fungi - 161; Plants - 120; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (gnl|cdd|85302 : 140.0) no description available & (reliability: 546.0) & (original description: Putative pco103958, Description = 40S ribosomal protein S8, PFAM = PF01201)' T '29.2.1.2.1.8' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8' 'niben101scf10676_154664-159096' '(p49199|rs8_orysa : 284.0) 40S ribosomal protein S8 - Oryza sativa (Rice) & (gnl|cdd|38493 : 272.0) no description available & (at5g59240 : 271.0) Ribosomal protein S8e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e (InterPro:IPR001047), Ribosomal protein S8e, conserved site (InterPro:IPR018283), Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8e family protein (TAIR:AT5G20290.1); Has 1068 Blast hits to 1064 proteins in 429 species: Archae - 247; Bacteria - 0; Metazoa - 364; Fungi - 161; Plants - 120; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|85302 : 140.0) no description available & (reliability: 542.0) & (original description: Putative rps8, Description = 40S ribosomal protein S8, PFAM = PF01201)' T '29.2.1.2.1.9' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S9' 'nbv0.3scaffold61018_7395-11626' '(at5g15200 : 297.0) Ribosomal protein S4; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic small ribosomal subunit, chloroplast, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912), Ribosomal protein S4, conserved site (InterPro:IPR018079), Ribosomal protein S4/S9, eukaryotic/archaeal (InterPro:IPR005710), RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (TAIR:AT5G39850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38511 : 244.0) no description available & (gnl|cdd|81277 : 150.0) no description available & (p49214|rs9_tobac : 107.0) 40S ribosomal protein S9 (S4) (Fragment) - Nicotiana tabacum (Common tobacco) & (reliability: 594.0) & (original description: Putative RPS9C, Description = 40S ribosomal protein S9-2, PFAM = PF00163;PF01479)' T '29.2.1.2.1.9' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S9' 'nbv0.5scaffold1116_189501-218671' '(at5g39850 : 238.0) Ribosomal protein S4; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912), Ribosomal protein S4, conserved site (InterPro:IPR018079), Ribosomal protein S4/S9, eukaryotic/archaeal (InterPro:IPR005710), RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (TAIR:AT5G15200.1); Has 6814 Blast hits to 6810 proteins in 3349 species: Archae - 264; Bacteria - 730; Metazoa - 422; Fungi - 285; Plants - 4172; Viruses - 0; Other Eukaryotes - 941 (source: NCBI BLink). & (gnl|cdd|38511 : 206.0) no description available & (gnl|cdd|81277 : 120.0) no description available & (p49214|rs9_tobac : 106.0) 40S ribosomal protein S9 (S4) (Fragment) - Nicotiana tabacum (Common tobacco) & (reliability: 476.0) & (original description: Putative rpS9, Description = 40S ribosomal protein S9, PFAM = PF01479)' T '29.2.1.2.1.9' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S9' 'niben101scf00272_1187932-1193975' '(at5g15200 : 297.0) Ribosomal protein S4; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic small ribosomal subunit, chloroplast, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912), Ribosomal protein S4, conserved site (InterPro:IPR018079), Ribosomal protein S4/S9, eukaryotic/archaeal (InterPro:IPR005710), RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (TAIR:AT5G39850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38511 : 245.0) no description available & (gnl|cdd|81277 : 149.0) no description available & (p49214|rs9_tobac : 110.0) 40S ribosomal protein S9 (S4) (Fragment) - Nicotiana tabacum (Common tobacco) & (reliability: 594.0) & (original description: Putative RPS9C, Description = 40S ribosomal protein S9-2, PFAM = PF01479;PF00163)' T '29.2.1.2.1.9' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S9' 'niben101scf04993_90518-95287' '(at5g15200 : 298.0) Ribosomal protein S4; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic small ribosomal subunit, chloroplast, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912), Ribosomal protein S4, conserved site (InterPro:IPR018079), Ribosomal protein S4/S9, eukaryotic/archaeal (InterPro:IPR005710), RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (TAIR:AT5G39850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38511 : 246.0) no description available & (gnl|cdd|81277 : 151.0) no description available & (p49214|rs9_tobac : 109.0) 40S ribosomal protein S9 (S4) (Fragment) - Nicotiana tabacum (Common tobacco) & (reliability: 596.0) & (original description: Putative RPS9C, Description = 40S ribosomal protein S9-2, PFAM = PF01479;PF00163)' T '29.2.1.2.1.9' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S9' 'niben101scf05229_539657-544539' '(at5g39850 : 299.0) Ribosomal protein S4; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912), Ribosomal protein S4, conserved site (InterPro:IPR018079), Ribosomal protein S4/S9, eukaryotic/archaeal (InterPro:IPR005710), RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (TAIR:AT5G15200.1); Has 6814 Blast hits to 6810 proteins in 3349 species: Archae - 264; Bacteria - 730; Metazoa - 422; Fungi - 285; Plants - 4172; Viruses - 0; Other Eukaryotes - 941 (source: NCBI BLink). & (gnl|cdd|38511 : 247.0) no description available & (gnl|cdd|81277 : 154.0) no description available & (p49214|rs9_tobac : 107.0) 40S ribosomal protein S9 (S4) (Fragment) - Nicotiana tabacum (Common tobacco) & (reliability: 598.0) & (original description: Putative RPS9C, Description = 40S ribosomal protein S9-2, PFAM = PF01479;PF00163)' T '29.2.1.2.1.10' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S10' 'niben101scf01689_449721-454849' '(gnl|cdd|38554 : 189.0) no description available & (at4g25740 : 181.0) RNA binding Plectin/S10 domain-containing protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plectin/S10, N-terminal (InterPro:IPR005326); BEST Arabidopsis thaliana protein match is: RNA binding Plectin/S10 domain-containing protein (TAIR:AT5G52650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9ayp4|rs10_orysa : 175.0) 40S ribosomal protein S10 - Oryza sativa (Rice) & (gnl|cdd|67137 : 170.0) no description available & (reliability: 362.0) & (original description: Putative RPS10A, Description = 40S ribosomal protein S10-1, PFAM = PF03501)' T '29.2.1.2.1.10' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S10' 'niben101scf13703_137840-141974' '(gnl|cdd|38554 : 192.0) no description available & (at4g25740 : 187.0) RNA binding Plectin/S10 domain-containing protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plectin/S10, N-terminal (InterPro:IPR005326); BEST Arabidopsis thaliana protein match is: RNA binding Plectin/S10 domain-containing protein (TAIR:AT5G52650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9ayp4|rs10_orysa : 178.0) 40S ribosomal protein S10 - Oryza sativa (Rice) & (gnl|cdd|67137 : 168.0) no description available & (reliability: 374.0) & (original description: Putative RPS10A, Description = 40S ribosomal protein S10-1, PFAM = PF03501)' T '29.2.1.2.1.11' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S11' 'niben101scf02220_637725-641848' '(p17093|rs11_soybn : 266.0) 40S ribosomal protein S11 - Glycine max (Soybean) & (at5g23740 : 259.0) Encodes a putative ribosomal protein S11 (RPS11-beta).; ribosomal protein S11-beta (RPS11-BETA); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S17, archaeal (InterPro:IPR019978), Ribosomal protein S17, conserved site (InterPro:IPR019979), Ribosomal protein S17 (InterPro:IPR000266); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT3G48930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36939 : 237.0) no description available & (gnl|cdd|82687 : 127.0) no description available & (reliability: 518.0) & (original description: Putative RPS11, Description = Ribosomal protein S11, PFAM = PF00366;PF16205)' T '29.2.1.2.1.11' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S11' 'niben101scf05588_517724-522891' '(p17093|rs11_soybn : 268.0) 40S ribosomal protein S11 - Glycine max (Soybean) & (at5g23740 : 260.0) Encodes a putative ribosomal protein S11 (RPS11-beta).; ribosomal protein S11-beta (RPS11-BETA); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S17, archaeal (InterPro:IPR019978), Ribosomal protein S17, conserved site (InterPro:IPR019979), Ribosomal protein S17 (InterPro:IPR000266); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT3G48930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36939 : 239.0) no description available & (gnl|cdd|82687 : 126.0) no description available & (reliability: 520.0) & (original description: Putative RPS11A, Description = 40S ribosomal protein S11-1, PFAM = PF00366;PF16205)' T '29.2.1.2.1.11' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S11' 'niben101scf06761_110604-114605' '(p17093|rs11_soybn : 267.0) 40S ribosomal protein S11 - Glycine max (Soybean) & (at5g23740 : 259.0) Encodes a putative ribosomal protein S11 (RPS11-beta).; ribosomal protein S11-beta (RPS11-BETA); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S17, archaeal (InterPro:IPR019978), Ribosomal protein S17, conserved site (InterPro:IPR019979), Ribosomal protein S17 (InterPro:IPR000266); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT3G48930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36939 : 237.0) no description available & (gnl|cdd|82687 : 127.0) no description available & (reliability: 518.0) & (original description: Putative RPS11A, Description = 40S ribosomal protein S11-1, PFAM = PF00366;PF16205)' T '29.2.1.2.1.11' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S11' 'niben101scf12405_10667-15020' '(p17093|rs11_soybn : 265.0) 40S ribosomal protein S11 - Glycine max (Soybean) & (at5g23740 : 258.0) Encodes a putative ribosomal protein S11 (RPS11-beta).; ribosomal protein S11-beta (RPS11-BETA); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S17, archaeal (InterPro:IPR019978), Ribosomal protein S17, conserved site (InterPro:IPR019979), Ribosomal protein S17 (InterPro:IPR000266); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT3G48930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36939 : 236.0) no description available & (gnl|cdd|82687 : 125.0) no description available & (reliability: 516.0) & (original description: Putative RPS11A, Description = 40S ribosomal protein S11-A, PFAM = PF16205;PF00366)' T '29.2.1.2.1.12' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S12' 'niben101scf00472_10330-14080' '(q9xhs0|rs12_horvu : 184.0) 40S ribosomal protein S12 - Hordeum vulgare (Barley) & (gnl|cdd|38616 : 163.0) no description available & (at2g32060 : 162.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S12e (InterPro:IPR000530), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT1G15930.1); Has 951 Blast hits to 951 proteins in 327 species: Archae - 187; Bacteria - 0; Metazoa - 313; Fungi - 169; Plants - 131; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|85334 : 88.7) no description available & (reliability: 324.0) & (original description: Putative RPS12, Description = 40S ribosomal protein S12, PFAM = PF01248)' T '29.2.1.2.1.12' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S12' 'niben101scf01054_1319224-1322333' '(q9xhs0|rs12_horvu : 189.0) 40S ribosomal protein S12 - Hordeum vulgare (Barley) & (at2g32060 : 167.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S12e (InterPro:IPR000530), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT1G15930.1); Has 951 Blast hits to 951 proteins in 327 species: Archae - 187; Bacteria - 0; Metazoa - 313; Fungi - 169; Plants - 131; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|38616 : 165.0) no description available & (gnl|cdd|85334 : 91.4) no description available & (reliability: 334.0) & (original description: Putative RPS12, Description = 40S ribosomal protein S12, PFAM = PF01248)' T '29.2.1.2.1.12' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S12' 'niben101scf03224_577772-580631' '(q9xhs0|rs12_horvu : 187.0) 40S ribosomal protein S12 - Hordeum vulgare (Barley) & (at2g32060 : 166.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S12e (InterPro:IPR000530), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT1G15930.1); Has 951 Blast hits to 951 proteins in 327 species: Archae - 187; Bacteria - 0; Metazoa - 313; Fungi - 169; Plants - 131; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|38616 : 165.0) no description available & (gnl|cdd|85334 : 90.6) no description available & (reliability: 332.0) & (original description: Putative RPS12, Description = 40S ribosomal protein S12, PFAM = PF01248)' T '29.2.1.2.1.13' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S13' 'niben101scf00527_168049-173105' '(p62302|rs13_soybn : 267.0) 40S ribosomal protein S13 - Glycine max (Soybean) & (at4g00100 : 257.0) Encodes a cytoplasmic ribosomal protein S13 homologue involved in early leaf development; ribosomal protein S13A (RPS13A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, trichome morphogenesis, leaf morphogenesis, cytokinesis by cell plate formation; LOCATED IN: cytosolic small ribosomal subunit, nucleolus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13/S15, N-terminal (InterPro:IPR012606), Ribosomal protein S15 (InterPro:IPR000589), S15/NS1, RNA-binding (InterPro:IPR009068); BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S15 (TAIR:AT3G60770.1); Has 1100 Blast hits to 1100 proteins in 416 species: Archae - 259; Bacteria - 0; Metazoa - 343; Fungi - 146; Plants - 139; Viruses - 0; Other Eukaryotes - 213 (source: NCBI BLink). & (gnl|cdd|35621 : 246.0) no description available & (gnl|cdd|82677 : 176.0) no description available & (reliability: 514.0) & (original description: Putative RPS13B, Description = 40S ribosomal protein S13-2, PFAM = PF00312;PF08069)' T '29.2.1.2.1.13' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S13' 'niben101scf00603_833004-836516' '(p62302|rs13_soybn : 217.0) 40S ribosomal protein S13 - Glycine max (Soybean) & (at3g60770 : 213.0) Ribosomal protein S13/S15; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, cell wall, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13/S15, N-terminal (InterPro:IPR012606), Ribosomal protein S15 (InterPro:IPR000589), S15/NS1, RNA-binding (InterPro:IPR009068); BEST Arabidopsis thaliana protein match is: ribosomal protein S13A (TAIR:AT4G00100.1); Has 1099 Blast hits to 1099 proteins in 415 species: Archae - 259; Bacteria - 0; Metazoa - 342; Fungi - 146; Plants - 139; Viruses - 0; Other Eukaryotes - 213 (source: NCBI BLink). & (gnl|cdd|35621 : 202.0) no description available & (gnl|cdd|82677 : 146.0) no description available & (reliability: 426.0) & (original description: Putative rps13, Description = Ribosomal protein S13, PFAM = PF08069;PF00312)' T '29.2.1.2.1.14' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S14' 'nbv0.5scaffold3270_160086-164597' '(gnl|cdd|35628 : 233.0) no description available & (at3g52580 : 213.0) Ribosomal protein S11 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S11 (InterPro:IPR001971), Ribosomal S11, conserved site (InterPro:IPR018102); BEST Arabidopsis thaliana protein match is: Ribosomal protein S11 family protein (TAIR:AT3G11510.1); Has 8774 Blast hits to 8774 proteins in 2899 species: Archae - 250; Bacteria - 4863; Metazoa - 589; Fungi - 162; Plants - 729; Viruses - 0; Other Eukaryotes - 2181 (source: NCBI BLink). & (p19950|rs141_maize : 212.0) 40S ribosomal protein S14 (Clone MCH1) - Zea mays (Maize) & (gnl|cdd|83108 : 187.0) no description available & (reliability: 426.0) & (original description: Putative rps14, Description = 40S ribosomal protein S14, PFAM = PF00411)' T '29.2.1.2.1.14' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S14' 'niben101scf02232_39859-44113' '(gnl|cdd|35628 : 228.0) no description available & (at3g52580 : 213.0) Ribosomal protein S11 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S11 (InterPro:IPR001971), Ribosomal S11, conserved site (InterPro:IPR018102); BEST Arabidopsis thaliana protein match is: Ribosomal protein S11 family protein (TAIR:AT3G11510.1); Has 8774 Blast hits to 8774 proteins in 2899 species: Archae - 250; Bacteria - 4863; Metazoa - 589; Fungi - 162; Plants - 729; Viruses - 0; Other Eukaryotes - 2181 (source: NCBI BLink). & (p19950|rs141_maize : 212.0) 40S ribosomal protein S14 (Clone MCH1) - Zea mays (Maize) & (gnl|cdd|83108 : 182.0) no description available & (reliability: 426.0) & (original description: Putative rps11, Description = 40S ribosomal protein S14, PFAM = PF00411)' T '29.2.1.2.1.14' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S14' 'niben101scf09089_199658-204188' '(gnl|cdd|35628 : 228.0) no description available & (p19950|rs141_maize : 214.0) 40S ribosomal protein S14 (Clone MCH1) - Zea mays (Maize) & (at3g52580 : 213.0) Ribosomal protein S11 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S11 (InterPro:IPR001971), Ribosomal S11, conserved site (InterPro:IPR018102); BEST Arabidopsis thaliana protein match is: Ribosomal protein S11 family protein (TAIR:AT3G11510.1); Has 8774 Blast hits to 8774 proteins in 2899 species: Archae - 250; Bacteria - 4863; Metazoa - 589; Fungi - 162; Plants - 729; Viruses - 0; Other Eukaryotes - 2181 (source: NCBI BLink). & (gnl|cdd|83108 : 182.0) no description available & (reliability: 426.0) & (original description: Putative RPS14A, Description = 40S ribosomal protein S14-1, PFAM = PF00411)' T '29.2.1.2.1.14' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S14' 'niben101scf19719_34325-38939' '(gnl|cdd|35628 : 228.0) no description available & (p19950|rs141_maize : 215.0) 40S ribosomal protein S14 (Clone MCH1) - Zea mays (Maize) & (at3g11510 : 213.0) Ribosomal protein S11 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S11 (InterPro:IPR001971), Ribosomal S11, conserved site (InterPro:IPR018102); BEST Arabidopsis thaliana protein match is: Ribosomal protein S11 family protein (TAIR:AT2G36160.1); Has 8773 Blast hits to 8773 proteins in 2901 species: Archae - 250; Bacteria - 4863; Metazoa - 587; Fungi - 162; Plants - 736; Viruses - 0; Other Eukaryotes - 2175 (source: NCBI BLink). & (gnl|cdd|83108 : 182.0) no description available & (reliability: 426.0) & (original description: Putative RPS14A, Description = 40S ribosomal protein S14-1, PFAM = PF00411)' T '29.2.1.2.1.15' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S15' 'nbv0.5scaffold4632_68639-71067' '(gnl|cdd|36116 : 202.0) no description available & (p31674|rs15_orysa : 197.0) 40S ribosomal protein S15 - Oryza sativa (Rice) & (at5g09500 : 194.0) Ribosomal protein S19 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S15, eukaryotic/archaeal (InterPro:IPR005713), Ribosomal protein S19/S15 (InterPro:IPR002222), Ribosomal protein S19 conserved site (InterPro:IPR020934); BEST Arabidopsis thaliana protein match is: Ribosomal protein S19 family protein (TAIR:AT5G09490.1); Has 7968 Blast hits to 7968 proteins in 3010 species: Archae - 256; Bacteria - 3995; Metazoa - 281; Fungi - 217; Plants - 1424; Viruses - 0; Other Eukaryotes - 1795 (source: NCBI BLink). & (gnl|cdd|81270 : 127.0) no description available & (reliability: 388.0) & (original description: Putative RPS15, Description = 40S ribosomal protein S15, PFAM = PF00203)' T '29.2.1.2.1.15' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S15' 'niben101scf02830_230705-234869' '(gnl|cdd|36116 : 261.0) no description available & (p31674|rs15_orysa : 249.0) 40S ribosomal protein S15 - Oryza sativa (Rice) & (at5g09500 : 238.0) Ribosomal protein S19 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S15, eukaryotic/archaeal (InterPro:IPR005713), Ribosomal protein S19/S15 (InterPro:IPR002222), Ribosomal protein S19 conserved site (InterPro:IPR020934); BEST Arabidopsis thaliana protein match is: Ribosomal protein S19 family protein (TAIR:AT5G09490.1); Has 7968 Blast hits to 7968 proteins in 3010 species: Archae - 256; Bacteria - 3995; Metazoa - 281; Fungi - 217; Plants - 1424; Viruses - 0; Other Eukaryotes - 1795 (source: NCBI BLink). & (gnl|cdd|81270 : 157.0) no description available & (reliability: 476.0) & (original description: Putative RPS15B, Description = 40S ribosomal protein S15-2, PFAM = PF00203)' T '29.2.1.2.1.15' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S15' 'niben101scf03652_359988-366335' '(gnl|cdd|36116 : 258.0) no description available & (p31674|rs15_orysa : 249.0) 40S ribosomal protein S15 - Oryza sativa (Rice) & (at5g09500 : 234.0) Ribosomal protein S19 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S15, eukaryotic/archaeal (InterPro:IPR005713), Ribosomal protein S19/S15 (InterPro:IPR002222), Ribosomal protein S19 conserved site (InterPro:IPR020934); BEST Arabidopsis thaliana protein match is: Ribosomal protein S19 family protein (TAIR:AT5G09490.1); Has 7968 Blast hits to 7968 proteins in 3010 species: Archae - 256; Bacteria - 3995; Metazoa - 281; Fungi - 217; Plants - 1424; Viruses - 0; Other Eukaryotes - 1795 (source: NCBI BLink). & (gnl|cdd|81270 : 156.0) no description available & (reliability: 468.0) & (original description: Putative RPS15, Description = 40S ribosomal protein S15, PFAM = PF00203)' T '29.2.1.2.1.15' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S15' 'niben101scf03824_222604-227346' '(gnl|cdd|36116 : 257.0) no description available & (p31674|rs15_orysa : 249.0) 40S ribosomal protein S15 - Oryza sativa (Rice) & (at5g09500 : 233.0) Ribosomal protein S19 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S15, eukaryotic/archaeal (InterPro:IPR005713), Ribosomal protein S19/S15 (InterPro:IPR002222), Ribosomal protein S19 conserved site (InterPro:IPR020934); BEST Arabidopsis thaliana protein match is: Ribosomal protein S19 family protein (TAIR:AT5G09490.1); Has 7968 Blast hits to 7968 proteins in 3010 species: Archae - 256; Bacteria - 3995; Metazoa - 281; Fungi - 217; Plants - 1424; Viruses - 0; Other Eukaryotes - 1795 (source: NCBI BLink). & (gnl|cdd|81270 : 156.0) no description available & (reliability: 466.0) & (original description: Putative RPS15, Description = 40S ribosomal protein S15, PFAM = PF00203)' T '29.2.1.2.1.15' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S15' 'niben101scf10431_106382-108840' '(gnl|cdd|36116 : 240.0) no description available & (p31674|rs15_orysa : 232.0) 40S ribosomal protein S15 - Oryza sativa (Rice) & (at5g09500 : 224.0) Ribosomal protein S19 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S15, eukaryotic/archaeal (InterPro:IPR005713), Ribosomal protein S19/S15 (InterPro:IPR002222), Ribosomal protein S19 conserved site (InterPro:IPR020934); BEST Arabidopsis thaliana protein match is: Ribosomal protein S19 family protein (TAIR:AT5G09490.1); Has 7968 Blast hits to 7968 proteins in 3010 species: Archae - 256; Bacteria - 3995; Metazoa - 281; Fungi - 217; Plants - 1424; Viruses - 0; Other Eukaryotes - 1795 (source: NCBI BLink). & (gnl|cdd|81270 : 151.0) no description available & (reliability: 448.0) & (original description: Putative RPS15, Description = 40S ribosomal protein S15, PFAM = PF00203)' T '29.2.1.2.1.16' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S16' 'niben101scf00110_115295-117735' '(p46293|rs16_goshi : 246.0) 40S ribosomal protein S16 - Gossypium hirsutum (Upland cotton) & (at2g09990 : 245.0) Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, cell wall, chloroplast, membrane; EXPRESSED IN: guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Ribosomal protein S9 (InterPro:IPR000754), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S9, conserved site (InterPro:IPR020574), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 domain 2-like superfamily protein (TAIR:AT5G18380.1); Has 7467 Blast hits to 7467 proteins in 2677 species: Archae - 233; Bacteria - 4861; Metazoa - 362; Fungi - 182; Plants - 151; Viruses - 0; Other Eukaryotes - 1678 (source: NCBI BLink). & (gnl|cdd|36964 : 238.0) no description available & (gnl|cdd|64255 : 138.0) no description available & (reliability: 490.0) & (original description: Putative RPS16, Description = 40S ribosomal protein S16, PFAM = PF00380)' T '29.2.1.2.1.16' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S16' 'niben101scf03534_121067-123507' '(p46293|rs16_goshi : 248.0) 40S ribosomal protein S16 - Gossypium hirsutum (Upland cotton) & (at2g09990 : 246.0) Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, cell wall, chloroplast, membrane; EXPRESSED IN: guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Ribosomal protein S9 (InterPro:IPR000754), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S9, conserved site (InterPro:IPR020574), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 domain 2-like superfamily protein (TAIR:AT5G18380.1); Has 7467 Blast hits to 7467 proteins in 2677 species: Archae - 233; Bacteria - 4861; Metazoa - 362; Fungi - 182; Plants - 151; Viruses - 0; Other Eukaryotes - 1678 (source: NCBI BLink). & (gnl|cdd|36964 : 239.0) no description available & (gnl|cdd|64255 : 138.0) no description available & (reliability: 492.0) & (original description: Putative RPS16, Description = 40S ribosomal protein S16, PFAM = PF00380)' T '29.2.1.2.1.16' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S16' 'niben101scf05845_353843-356292' '(at2g09990 : 248.0) Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, cell wall, chloroplast, membrane; EXPRESSED IN: guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Ribosomal protein S9 (InterPro:IPR000754), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S9, conserved site (InterPro:IPR020574), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 domain 2-like superfamily protein (TAIR:AT5G18380.1); Has 7467 Blast hits to 7467 proteins in 2677 species: Archae - 233; Bacteria - 4861; Metazoa - 362; Fungi - 182; Plants - 151; Viruses - 0; Other Eukaryotes - 1678 (source: NCBI BLink). & (p46293|rs16_goshi : 247.0) 40S ribosomal protein S16 - Gossypium hirsutum (Upland cotton) & (gnl|cdd|36964 : 242.0) no description available & (gnl|cdd|64255 : 139.0) no description available & (reliability: 496.0) & (original description: Putative RPS16A, Description = 40S ribosomal protein S16-1, PFAM = PF00380)' T '29.2.1.2.1.16' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S16' 'niben101scf05955_70275-72715' '(at2g09990 : 246.0) Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, cell wall, chloroplast, membrane; EXPRESSED IN: guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Ribosomal protein S9 (InterPro:IPR000754), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S9, conserved site (InterPro:IPR020574), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 domain 2-like superfamily protein (TAIR:AT5G18380.1); Has 7467 Blast hits to 7467 proteins in 2677 species: Archae - 233; Bacteria - 4861; Metazoa - 362; Fungi - 182; Plants - 151; Viruses - 0; Other Eukaryotes - 1678 (source: NCBI BLink). & (p46293|rs16_goshi : 246.0) 40S ribosomal protein S16 - Gossypium hirsutum (Upland cotton) & (gnl|cdd|36964 : 237.0) no description available & (gnl|cdd|64255 : 138.0) no description available & (reliability: 492.0) & (original description: Putative RPS16, Description = 40S ribosomal protein S16, PFAM = PF00380)' T '29.2.1.2.1.17' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S17' 'nbv0.3scaffold1316_82071-84216' '(at1g49400 : 132.0) embryo defective 1129 (emb1129); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: cytosolic small ribosomal subunit, ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S17, bacterial-type (InterPro:IPR019984), Ribosomal protein S17 (InterPro:IPR000266); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT3G18880.1); Has 7577 Blast hits to 7577 proteins in 2675 species: Archae - 139; Bacteria - 5329; Metazoa - 53; Fungi - 85; Plants - 120; Viruses - 0; Other Eukaryotes - 1851 (source: NCBI BLink). & (gnl|cdd|36951 : 112.0) no description available & (gnl|cdd|81659 : 92.5) no description available & (reliability: 264.0) & (original description: Putative rpsQ, Description = 30S ribosomal protein S17, PFAM = PF00366)' T '29.2.1.2.1.17' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S17' 'niben101scf00912_399270-401704' '(at5g04800 : 197.0) Ribosomal S17 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein S17e (InterPro:IPR001210), Ribosomal protein S17e, conserved site (InterPro:IPR018273); BEST Arabidopsis thaliana protein match is: Ribosomal S17 family protein (TAIR:AT2G04390.1); Has 1004 Blast hits to 1004 proteins in 349 species: Archae - 194; Bacteria - 0; Metazoa - 361; Fungi - 144; Plants - 127; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|35408 : 189.0) no description available & (gnl|cdd|85056 : 166.0) no description available & (reliability: 394.0) & (original description: Putative RPS17, Description = 40S ribosomal protein S17, PFAM = PF00833)' T '29.2.1.2.1.17' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S17' 'niben101scf01440_190501-192947' '(at5g04800 : 189.0) Ribosomal S17 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein S17e (InterPro:IPR001210), Ribosomal protein S17e, conserved site (InterPro:IPR018273); BEST Arabidopsis thaliana protein match is: Ribosomal S17 family protein (TAIR:AT2G04390.1); Has 1004 Blast hits to 1004 proteins in 349 species: Archae - 194; Bacteria - 0; Metazoa - 361; Fungi - 144; Plants - 127; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|35408 : 185.0) no description available & (gnl|cdd|85056 : 167.0) no description available & (reliability: 378.0) & (original description: Putative rps1701, Description = 40S ribosomal protein S17-A, PFAM = PF00833)' T '29.2.1.2.1.17' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S17' 'niben101scf01834_515912-518343' '(at5g04800 : 92.4) Ribosomal S17 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein S17e (InterPro:IPR001210), Ribosomal protein S17e, conserved site (InterPro:IPR018273); BEST Arabidopsis thaliana protein match is: Ribosomal S17 family protein (TAIR:AT2G04390.1); Has 1004 Blast hits to 1004 proteins in 349 species: Archae - 194; Bacteria - 0; Metazoa - 361; Fungi - 144; Plants - 127; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative rps17, Description = 40S ribosomal protein S17, PFAM = PF00833)' T '29.2.1.2.1.17' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S17' 'niben101scf02437_233820-237364' '(at1g49400 : 132.0) embryo defective 1129 (emb1129); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: cytosolic small ribosomal subunit, ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S17, bacterial-type (InterPro:IPR019984), Ribosomal protein S17 (InterPro:IPR000266); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT3G18880.1); Has 7577 Blast hits to 7577 proteins in 2675 species: Archae - 139; Bacteria - 5329; Metazoa - 53; Fungi - 85; Plants - 120; Viruses - 0; Other Eukaryotes - 1851 (source: NCBI BLink). & (gnl|cdd|36951 : 111.0) no description available & (gnl|cdd|81659 : 93.7) no description available & (reliability: 264.0) & (original description: Putative rpsQ, Description = 30S ribosomal protein S17, PFAM = PF00366)' T '29.2.1.2.1.17' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S17' 'niben101scf07939_136454-138868' '(at1g49400 : 130.0) embryo defective 1129 (emb1129); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: cytosolic small ribosomal subunit, ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S17, bacterial-type (InterPro:IPR019984), Ribosomal protein S17 (InterPro:IPR000266); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT3G18880.1); Has 7577 Blast hits to 7577 proteins in 2675 species: Archae - 139; Bacteria - 5329; Metazoa - 53; Fungi - 85; Plants - 120; Viruses - 0; Other Eukaryotes - 1851 (source: NCBI BLink). & (gnl|cdd|36951 : 110.0) no description available & (gnl|cdd|81659 : 93.3) no description available & (reliability: 260.0) & (original description: Putative rpsQ, Description = 30S ribosomal protein S17, PFAM = PF00366)' T '29.2.1.2.1.18' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S18' 'niben044scf00023066ctg001_1661-12385' '(at4g09800 : 188.0) encodes a ribosomal protein S18C, a constituent of the small subunit of the ribosomal complex; S18 ribosomal protein (RPS18C); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleic acid binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, small ribosomal subunit, nucleolus, cell wall, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13-like, H2TH (InterPro:IPR010979), Ribosomal protein S13, conserved site (InterPro:IPR018269), Ribosomal protein S13 (InterPro:IPR001892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S18 family (TAIR:AT1G22780.1); Has 7974 Blast hits to 7971 proteins in 2923 species: Archae - 237; Bacteria - 5081; Metazoa - 352; Fungi - 177; Plants - 401; Viruses - 0; Other Eukaryotes - 1726 (source: NCBI BLink). & (p49202|rs18_chlre : 152.0) 40S ribosomal protein S18 - Chlamydomonas reinhardtii & (gnl|cdd|38521 : 138.0) no description available & (gnl|cdd|81278 : 105.0) no description available & (reliability: 376.0) & (original description: Putative rpS18, Description = Ribosomal protein S18, PFAM = PF00416)' T '29.2.1.2.1.18' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S18' 'niben101scf01339_270793-274344' '(at4g09800 : 240.0) encodes a ribosomal protein S18C, a constituent of the small subunit of the ribosomal complex; S18 ribosomal protein (RPS18C); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleic acid binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, small ribosomal subunit, nucleolus, cell wall, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13-like, H2TH (InterPro:IPR010979), Ribosomal protein S13, conserved site (InterPro:IPR018269), Ribosomal protein S13 (InterPro:IPR001892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S18 family (TAIR:AT1G22780.1); Has 7974 Blast hits to 7971 proteins in 2923 species: Archae - 237; Bacteria - 5081; Metazoa - 352; Fungi - 177; Plants - 401; Viruses - 0; Other Eukaryotes - 1726 (source: NCBI BLink). & (gnl|cdd|38521 : 203.0) no description available & (p49202|rs18_chlre : 198.0) 40S ribosomal protein S18 - Chlamydomonas reinhardtii & (gnl|cdd|81278 : 164.0) no description available & (reliability: 480.0) & (original description: Putative RPS18, Description = 40S ribosomal protein S18, PFAM = PF00416)' T '29.2.1.2.1.18' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S18' 'niben101scf01349_420626-425007' '(at4g09800 : 241.0) encodes a ribosomal protein S18C, a constituent of the small subunit of the ribosomal complex; S18 ribosomal protein (RPS18C); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleic acid binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, small ribosomal subunit, nucleolus, cell wall, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13-like, H2TH (InterPro:IPR010979), Ribosomal protein S13, conserved site (InterPro:IPR018269), Ribosomal protein S13 (InterPro:IPR001892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S18 family (TAIR:AT1G22780.1); Has 7974 Blast hits to 7971 proteins in 2923 species: Archae - 237; Bacteria - 5081; Metazoa - 352; Fungi - 177; Plants - 401; Viruses - 0; Other Eukaryotes - 1726 (source: NCBI BLink). & (gnl|cdd|38521 : 203.0) no description available & (p49202|rs18_chlre : 198.0) 40S ribosomal protein S18 - Chlamydomonas reinhardtii & (gnl|cdd|81278 : 165.0) no description available & (reliability: 482.0) & (original description: Putative RPS18A, Description = 40S ribosomal protein S18, PFAM = PF00416)' T '29.2.1.2.1.18' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S18' 'niben101scf03203_723010-726540' '(at4g09800 : 240.0) encodes a ribosomal protein S18C, a constituent of the small subunit of the ribosomal complex; S18 ribosomal protein (RPS18C); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleic acid binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, small ribosomal subunit, nucleolus, cell wall, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13-like, H2TH (InterPro:IPR010979), Ribosomal protein S13, conserved site (InterPro:IPR018269), Ribosomal protein S13 (InterPro:IPR001892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S18 family (TAIR:AT1G22780.1); Has 7974 Blast hits to 7971 proteins in 2923 species: Archae - 237; Bacteria - 5081; Metazoa - 352; Fungi - 177; Plants - 401; Viruses - 0; Other Eukaryotes - 1726 (source: NCBI BLink). & (gnl|cdd|38521 : 204.0) no description available & (p49202|rs18_chlre : 196.0) 40S ribosomal protein S18 - Chlamydomonas reinhardtii & (gnl|cdd|81278 : 166.0) no description available & (reliability: 480.0) & (original description: Putative RpS18, Description = 40S ribosomal protein S18, PFAM = PF00416)' T '29.2.1.2.1.18' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S18' 'niben101scf03848_932204-936957' '(at4g09800 : 256.0) encodes a ribosomal protein S18C, a constituent of the small subunit of the ribosomal complex; S18 ribosomal protein (RPS18C); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleic acid binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, small ribosomal subunit, nucleolus, cell wall, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13-like, H2TH (InterPro:IPR010979), Ribosomal protein S13, conserved site (InterPro:IPR018269), Ribosomal protein S13 (InterPro:IPR001892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S18 family (TAIR:AT1G22780.1); Has 7974 Blast hits to 7971 proteins in 2923 species: Archae - 237; Bacteria - 5081; Metazoa - 352; Fungi - 177; Plants - 401; Viruses - 0; Other Eukaryotes - 1726 (source: NCBI BLink). & (gnl|cdd|38521 : 215.0) no description available & (p49202|rs18_chlre : 208.0) 40S ribosomal protein S18 - Chlamydomonas reinhardtii & (gnl|cdd|81278 : 174.0) no description available & (reliability: 512.0) & (original description: Putative RPS18A, Description = 40S ribosomal protein S18, PFAM = PF00416)' T '29.2.1.2.1.18' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S18' 'niben101scf09436_496618-500314' '(at4g09800 : 190.0) encodes a ribosomal protein S18C, a constituent of the small subunit of the ribosomal complex; S18 ribosomal protein (RPS18C); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleic acid binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, small ribosomal subunit, nucleolus, cell wall, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13-like, H2TH (InterPro:IPR010979), Ribosomal protein S13, conserved site (InterPro:IPR018269), Ribosomal protein S13 (InterPro:IPR001892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S18 family (TAIR:AT1G22780.1); Has 7974 Blast hits to 7971 proteins in 2923 species: Archae - 237; Bacteria - 5081; Metazoa - 352; Fungi - 177; Plants - 401; Viruses - 0; Other Eukaryotes - 1726 (source: NCBI BLink). & (p49202|rs18_chlre : 155.0) 40S ribosomal protein S18 - Chlamydomonas reinhardtii & (gnl|cdd|38521 : 141.0) no description available & (gnl|cdd|81278 : 108.0) no description available & (reliability: 380.0) & (original description: Putative Rps18, Description = 40S ribosomal protein S18, PFAM = PF00416)' T '29.2.1.2.1.19' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S19' 'niben101scf00914_316375-318656' '(p27527|rt19_pethy : 145.0) Mitochondrial ribosomal protein S19 - Petunia hybrida (Petunia) & (at5g47320 : 109.0) Nuclear encoded mitochondrial ribosome subunit.; ribosomal protein S19 (RPS19); CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein S19/S15 (InterPro:IPR002222), Ribosomal protein S19 conserved site (InterPro:IPR020934), Ribosomal protein S19, bacterial-type (InterPro:IPR005732); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 4 (TAIR:AT3G23830.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84606 : 93.8) no description available & (gnl|cdd|36117 : 93.2) no description available & (reliability: 218.0) & (original description: Putative RPS19, Description = Ribosomal protein S19, mitochondrial, PFAM = PF00203)' T '29.2.1.2.1.19' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S19' 'niben101scf01346_176708-180670' '(gnl|cdd|38621 : 218.0) no description available & (gnl|cdd|85236 : 213.0) no description available & (at5g61170 : 210.0) Ribosomal protein S19e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S19e, conserved site (InterPro:IPR018277), Ribosomal protein S19e (InterPro:IPR001266); BEST Arabidopsis thaliana protein match is: Ribosomal protein S19e family protein (TAIR:AT5G15520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40978|rs19_orysa : 193.0) 40S ribosomal protein S19 - Oryza sativa (Rice) & (reliability: 420.0) & (original description: Putative RPS19B, Description = 40S ribosomal protein S19-2, PFAM = PF01090)' T '29.2.1.2.1.19' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S19' 'niben101scf02646_203523-207961' '(gnl|cdd|38621 : 219.0) no description available & (gnl|cdd|85236 : 214.0) no description available & (at5g61170 : 210.0) Ribosomal protein S19e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S19e, conserved site (InterPro:IPR018277), Ribosomal protein S19e (InterPro:IPR001266); BEST Arabidopsis thaliana protein match is: Ribosomal protein S19e family protein (TAIR:AT5G15520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40978|rs19_orysa : 192.0) 40S ribosomal protein S19 - Oryza sativa (Rice) & (reliability: 420.0) & (original description: Putative RPS19, Description = 40S ribosomal protein S19, PFAM = PF01090)' T '29.2.1.2.1.19' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S19' 'niben101scf07325_163868-168139' '(gnl|cdd|38621 : 219.0) no description available & (gnl|cdd|85236 : 212.0) no description available & (at5g61170 : 207.0) Ribosomal protein S19e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S19e, conserved site (InterPro:IPR018277), Ribosomal protein S19e (InterPro:IPR001266); BEST Arabidopsis thaliana protein match is: Ribosomal protein S19e family protein (TAIR:AT5G15520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40978|rs19_orysa : 193.0) 40S ribosomal protein S19 - Oryza sativa (Rice) & (reliability: 414.0) & (original description: Putative RPS19A, Description = 40S ribosomal protein S19-1, PFAM = PF01090)' T '29.2.1.2.1.19' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S19' 'niben101scf08721_147121-151053' '(gnl|cdd|38621 : 220.0) no description available & (gnl|cdd|85236 : 213.0) no description available & (at5g61170 : 209.0) Ribosomal protein S19e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S19e, conserved site (InterPro:IPR018277), Ribosomal protein S19e (InterPro:IPR001266); BEST Arabidopsis thaliana protein match is: Ribosomal protein S19e family protein (TAIR:AT5G15520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p40978|rs19_orysa : 196.0) 40S ribosomal protein S19 - Oryza sativa (Rice) & (reliability: 418.0) & (original description: Putative RPS19A, Description = 40S ribosomal protein S19-1, PFAM = PF01090)' T '29.2.1.2.1.19' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S19' 'niben101scf11705_27138-30155' '(p27527|rt19_pethy : 147.0) Mitochondrial ribosomal protein S19 - Petunia hybrida (Petunia) & (at5g47320 : 102.0) Nuclear encoded mitochondrial ribosome subunit.; ribosomal protein S19 (RPS19); CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein S19/S15 (InterPro:IPR002222), Ribosomal protein S19 conserved site (InterPro:IPR020934), Ribosomal protein S19, bacterial-type (InterPro:IPR005732); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 4 (TAIR:AT3G23830.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84606 : 96.1) no description available & (gnl|cdd|36117 : 91.3) no description available & (reliability: 204.0) & (original description: Putative RPS19, Description = Ribosomal protein S19, mitochondrial, PFAM = PF00203)' T '29.2.1.2.1.20' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S20' 'niben101scf04300_10602-16019' '(at3g47370 : 202.0) Ribosomal protein S10p/S20e family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S10, conserved site (InterPro:IPR018268), Ribosomal protein S10, eukaryotic/archaeal (InterPro:IPR005729), Ribosomal protein S10 (InterPro:IPR001848); BEST Arabidopsis thaliana protein match is: Ribosomal protein S10p/S20e family protein (TAIR:AT5G62300.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p35686|rs20_orysa : 182.0) 40S ribosomal protein S20 - Oryza sativa (Rice) & (gnl|cdd|36118 : 154.0) no description available & (gnl|cdd|64215 : 124.0) no description available & (reliability: 404.0) & (original description: Putative RPS20, Description = 40S ribosomal protein S20, PFAM = PF00338)' T '29.2.1.2.1.20' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S20' 'niben101scf10431_120555-124450' '(at5g62300 : 204.0) Ribosomal protein S10p/S20e family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, small ribosomal subunit; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein S10, conserved site (InterPro:IPR018268), Ribosomal protein S10, eukaryotic/archaeal (InterPro:IPR005729), Ribosomal protein S10 (InterPro:IPR001848); BEST Arabidopsis thaliana protein match is: Ribosomal protein S10p/S20e family protein (TAIR:AT3G45030.1); Has 7487 Blast hits to 7487 proteins in 2603 species: Archae - 270; Bacteria - 4745; Metazoa - 380; Fungi - 144; Plants - 182; Viruses - 0; Other Eukaryotes - 1766 (source: NCBI BLink). & (p35686|rs20_orysa : 181.0) 40S ribosomal protein S20 - Oryza sativa (Rice) & (gnl|cdd|36118 : 155.0) no description available & (gnl|cdd|64215 : 123.0) no description available & (reliability: 408.0) & (original description: Putative RPS20B, Description = 40S ribosomal protein S20-2, PFAM = PF00338)' T '29.2.1.2.1.21' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S21' 'nbv0.3scaffold1784_4984-7229' '(at5g27700 : 130.0) Ribosomal protein S21e ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21e, conserved site (InterPro:IPR018279), Ribosomal protein S21e (InterPro:IPR001931); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21e (TAIR:AT3G53890.2); Has 660 Blast hits to 660 proteins in 258 species: Archae - 0; Bacteria - 0; Metazoa - 293; Fungi - 137; Plants - 120; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). & (p35687|rs21_orysa : 129.0) 40S ribosomal protein S21 - Oryza sativa (Rice) & (gnl|cdd|38696 : 124.0) no description available & (gnl|cdd|85335 : 119.0) no description available & (reliability: 260.0) & (original description: Putative RPS21B, Description = 40S ribosomal protein S21-1, PFAM = PF01249)' T '29.2.1.2.1.21' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S21' 'niben101scf02626_42739-46133' '(at5g27700 : 120.0) Ribosomal protein S21e ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21e, conserved site (InterPro:IPR018279), Ribosomal protein S21e (InterPro:IPR001931); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21e (TAIR:AT3G53890.2); Has 660 Blast hits to 660 proteins in 258 species: Archae - 0; Bacteria - 0; Metazoa - 293; Fungi - 137; Plants - 120; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). & (p35687|rs21_orysa : 117.0) 40S ribosomal protein S21 - Oryza sativa (Rice) & (gnl|cdd|38696 : 117.0) no description available & (gnl|cdd|85335 : 110.0) no description available & (reliability: 240.0) & (original description: Putative rps21, Description = 40S ribosomal protein S21, PFAM = PF01249)' T '29.2.1.2.1.21' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S21' 'niben101scf04328_178681-188066' '(at3g27160 : 100.0) GHS1 encodes plastid ribosomal protein S21; GLUCOSE HYPERSENSITIVE 1 (GHS1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21 (InterPro:IPR001911); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21 family protein (TAIR:AT5G63300.1); Has 1937 Blast hits to 1937 proteins in 824 species: Archae - 0; Bacteria - 1717; Metazoa - 0; Fungi - 4; Plants - 72; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 194.8) & (original description: Putative GHS1, Description = GLUCOSE HYPERSENSITIVE 1 family protein, PFAM = PF01165)' T '29.2.1.2.1.21' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S21' 'niben101scf04455_539946-544281' '(at5g27700 : 131.0) Ribosomal protein S21e ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21e, conserved site (InterPro:IPR018279), Ribosomal protein S21e (InterPro:IPR001931); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21e (TAIR:AT3G53890.2); Has 660 Blast hits to 660 proteins in 258 species: Archae - 0; Bacteria - 0; Metazoa - 293; Fungi - 137; Plants - 120; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). & (p35687|rs21_orysa : 130.0) 40S ribosomal protein S21 - Oryza sativa (Rice) & (gnl|cdd|38696 : 125.0) no description available & (gnl|cdd|85335 : 119.0) no description available & (reliability: 262.0) & (original description: Putative RPS21, Description = 40S ribosomal protein S21, PFAM = PF01249)' T '29.2.1.2.1.21' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S21' 'niben101scf10524_243252-246354' '(at5g27700 : 139.0) Ribosomal protein S21e ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21e, conserved site (InterPro:IPR018279), Ribosomal protein S21e (InterPro:IPR001931); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21e (TAIR:AT3G53890.2); Has 660 Blast hits to 660 proteins in 258 species: Archae - 0; Bacteria - 0; Metazoa - 293; Fungi - 137; Plants - 120; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). & (p35687|rs21_orysa : 135.0) 40S ribosomal protein S21 - Oryza sativa (Rice) & (gnl|cdd|38696 : 132.0) no description available & (gnl|cdd|85335 : 128.0) no description available & (reliability: 278.0) & (original description: Putative RPS21, Description = 40S ribosomal protein S21, PFAM = PF01249)' T '29.2.1.2.1.22' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S22' '' '' '29.2.1.2.1.23' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S23' 'niben101scf00631_174113-177565' '(p46297|rs23_fraan : 250.0) 40S ribosomal protein S23 (S12) - Fragaria ananassa (Strawberry) & (at5g02960 : 243.0) Ribosomal protein S12/S23 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein S23, eukaryotic/archaeal (InterPro:IPR005680), Ribosomal protein S12/S23 (InterPro:IPR006032), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Ribosomal protein S12/S23 family protein (TAIR:AT3G09680.1); Has 9074 Blast hits to 9071 proteins in 3107 species: Archae - 259; Bacteria - 5125; Metazoa - 487; Fungi - 294; Plants - 977; Viruses - 0; Other Eukaryotes - 1932 (source: NCBI BLink). & (gnl|cdd|36960 : 234.0) no description available & (gnl|cdd|48340 : 193.0) no description available & (reliability: 486.0) & (original description: Putative RPS23A, Description = 40S ribosomal protein S23-1, PFAM = PF00164)' T '29.2.1.2.1.24' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S24' 'nbv0.5scaffold4581_116738-120683' '(at5g28060 : 188.0) Ribosomal protein S24e family protein; FUNCTIONS IN: structural constituent of ribosome, nucleotide binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S24e (InterPro:IPR001976), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal S24e conserved site (InterPro:IPR018098); BEST Arabidopsis thaliana protein match is: Ribosomal protein S24e family protein (TAIR:AT3G04920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38634 : 151.0) no description available & (gnl|cdd|32187 : 96.1) no description available & (reliability: 376.0) & (original description: Putative RPS24A, Description = 40S ribosomal protein S24-1, PFAM = PF01282)' T '29.2.1.2.1.24' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S24' 'niben101scf06447_26588-31020' '(at5g28060 : 184.0) Ribosomal protein S24e family protein; FUNCTIONS IN: structural constituent of ribosome, nucleotide binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S24e (InterPro:IPR001976), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal S24e conserved site (InterPro:IPR018098); BEST Arabidopsis thaliana protein match is: Ribosomal protein S24e family protein (TAIR:AT3G04920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38634 : 150.0) no description available & (gnl|cdd|32187 : 98.0) no description available & (reliability: 368.0) & (original description: Putative rps2402, Description = 40S ribosomal protein S24-B, PFAM = PF01282)' T '29.2.1.2.1.24' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S24' 'niben101scf06819_267522-271910' '(at5g28060 : 188.0) Ribosomal protein S24e family protein; FUNCTIONS IN: structural constituent of ribosome, nucleotide binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S24e (InterPro:IPR001976), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal S24e conserved site (InterPro:IPR018098); BEST Arabidopsis thaliana protein match is: Ribosomal protein S24e family protein (TAIR:AT3G04920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38634 : 153.0) no description available & (gnl|cdd|32187 : 98.4) no description available & (reliability: 376.0) & (original description: Putative RPS24A, Description = 40S ribosomal protein S24-1, PFAM = PF01282)' T '29.2.1.2.1.24' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S24' 'niben101scf11383_81133-85375' '(at5g28060 : 179.0) Ribosomal protein S24e family protein; FUNCTIONS IN: structural constituent of ribosome, nucleotide binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S24e (InterPro:IPR001976), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal S24e conserved site (InterPro:IPR018098); BEST Arabidopsis thaliana protein match is: Ribosomal protein S24e family protein (TAIR:AT3G04920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38634 : 138.0) no description available & (gnl|cdd|32187 : 90.3) no description available & (reliability: 358.0) & (original description: Putative RPS24A, Description = 40S ribosomal protein S24-1, PFAM = PF01282)' T '29.2.1.2.1.25' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S25' 'niben101scf00088_150233-153208' '(gnl|cdd|86293 : 124.0) no description available & (at4g34555 : 117.0) Ribosomal protein S25 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S25 (InterPro:IPR004977); BEST Arabidopsis thaliana protein match is: Ribosomal protein S25 family protein (TAIR:AT4G39200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36978 : 117.0) no description available & (reliability: 234.0) & (original description: Putative RPS25, Description = 40S ribosomal protein S25, PFAM = PF03297)' T '29.2.1.2.1.26' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S26' 'nbv0.5scaffold1674_411135-415263' '(gnl|cdd|85360 : 150.0) no description available & (gnl|cdd|36979 : 136.0) no description available & (at2g40590 : 109.0) Ribosomal protein S26e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, ribosome; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Ribosomal protein S26e (InterPro:IPR000892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S26e family protein (TAIR:AT2G40510.1); Has 766 Blast hits to 766 proteins in 273 species: Archae - 53; Bacteria - 0; Metazoa - 312; Fungi - 152; Plants - 120; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (p49216|rs26_orysa : 98.6) 40S ribosomal protein S26 (S31) - Oryza sativa (Rice) & (reliability: 218.0) & (original description: Putative RpS26, Description = 40S ribosomal protein S26, PFAM = PF01283)' T '29.2.1.2.1.26' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S26' 'niben101scf02316_38327-42248' '(gnl|cdd|85360 : 153.0) no description available & (gnl|cdd|36979 : 138.0) no description available & (at2g40590 : 107.0) Ribosomal protein S26e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, ribosome; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Ribosomal protein S26e (InterPro:IPR000892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S26e family protein (TAIR:AT2G40510.1); Has 766 Blast hits to 766 proteins in 273 species: Archae - 53; Bacteria - 0; Metazoa - 312; Fungi - 152; Plants - 120; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (p49216|rs26_orysa : 100.0) 40S ribosomal protein S26 (S31) - Oryza sativa (Rice) & (reliability: 214.0) & (original description: Putative RPS26B, Description = 40S ribosomal protein S26-2, PFAM = PF01283)' T '29.2.1.2.1.26' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S26' 'niben101scf03842_130869-135220' '(gnl|cdd|85360 : 151.0) no description available & (gnl|cdd|36979 : 139.0) no description available & (at2g40590 : 109.0) Ribosomal protein S26e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, ribosome; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Ribosomal protein S26e (InterPro:IPR000892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S26e family protein (TAIR:AT2G40510.1); Has 766 Blast hits to 766 proteins in 273 species: Archae - 53; Bacteria - 0; Metazoa - 312; Fungi - 152; Plants - 120; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (p49216|rs26_orysa : 100.0) 40S ribosomal protein S26 (S31) - Oryza sativa (Rice) & (reliability: 218.0) & (original description: Putative RPS26B, Description = 40S ribosomal protein S26-2, PFAM = PF01283)' T '29.2.1.2.1.26' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S26' 'niben101scf04181_80448-84471' '(gnl|cdd|85360 : 150.0) no description available & (gnl|cdd|36979 : 136.0) no description available & (at2g40590 : 109.0) Ribosomal protein S26e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, ribosome; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Ribosomal protein S26e (InterPro:IPR000892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S26e family protein (TAIR:AT2G40510.1); Has 766 Blast hits to 766 proteins in 273 species: Archae - 53; Bacteria - 0; Metazoa - 312; Fungi - 152; Plants - 120; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (p49216|rs26_orysa : 98.6) 40S ribosomal protein S26 (S31) - Oryza sativa (Rice) & (reliability: 218.0) & (original description: Putative RPS26B, Description = 40S ribosomal protein S26-2, PFAM = PF01283)' T '29.2.1.2.1.27' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S27' 'niben044scf00020875ctg009_23439-26433' '(at3g61110 : 158.0) Arabidopsis ribosomal protein; ribosomal protein S27 (RS27A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein, zinc-binding domain (InterPro:IPR011332), Ribosomal protein S27e (InterPro:IPR000592); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT2G45710.1); Has 1035 Blast hits to 1035 proteins in 379 species: Archae - 136; Bacteria - 0; Metazoa - 447; Fungi - 151; Plants - 149; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (p47903|rs27_chlre : 138.0) 40S ribosomal protein S27 - Chlamydomonas reinhardtii & (gnl|cdd|36990 : 133.0) no description available & (gnl|cdd|65462 : 85.4) no description available & (reliability: 316.0) & (original description: Putative RPS27B, Description = 40S ribosomal protein S27-2, PFAM = PF01667)' T '29.2.1.2.1.27' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S27' 'niben101scf00687_333078-335545' '(at2g47110 : 249.0) polyubiquitin gene; ubiquitin 6 (UBQ6); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: protein ubiquitination involved in ubiquitin-dependent protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: cytosolic small ribosomal subunit, intracellular; EXPRESSED IN: whole plant, male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ribosomal protein S27a (InterPro:IPR002906), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 5 (TAIR:AT3G62250.1). & (gnl|cdd|35228 : 225.0) no description available & (p69326|ubiq_wheat : 149.0) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|29205 : 147.0) no description available & (reliability: 476.0) & (original description: Putative r27a, Description = Ubiquitin-40S ribosomal protein S27a, PFAM = PF00240;PF01599)' T '29.2.1.2.1.27' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S27' 'niben101scf01236_489211-491678' '(at3g62250 : 248.0) ubiquitin 5 (UBQ5); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: protein ubiquitination involved in ubiquitin-dependent protein catabolic process, translation; LOCATED IN: cytosolic small ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ribosomal protein S27a (InterPro:IPR002906), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 6 (TAIR:AT2G47110.2); Has 12703 Blast hits to 7391 proteins in 781 species: Archae - 108; Bacteria - 19; Metazoa - 5541; Fungi - 1408; Plants - 3106; Viruses - 188; Other Eukaryotes - 2333 (source: NCBI BLink). & (gnl|cdd|35228 : 224.0) no description available & (p69326|ubiq_wheat : 148.0) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|29205 : 145.0) no description available & (reliability: 476.0) & (original description: Putative r27a, Description = Ubiquitin-40S ribosomal protein S27a, PFAM = PF00240;PF01599)' T '29.2.1.2.1.27' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S27' 'niben101scf01808_84115-86635' '(at3g61110 : 160.0) Arabidopsis ribosomal protein; ribosomal protein S27 (RS27A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein, zinc-binding domain (InterPro:IPR011332), Ribosomal protein S27e (InterPro:IPR000592); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT2G45710.1); Has 1035 Blast hits to 1035 proteins in 379 species: Archae - 136; Bacteria - 0; Metazoa - 447; Fungi - 151; Plants - 149; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (p47903|rs27_chlre : 140.0) 40S ribosomal protein S27 - Chlamydomonas reinhardtii & (gnl|cdd|36990 : 135.0) no description available & (gnl|cdd|65462 : 84.6) no description available & (reliability: 320.0) & (original description: Putative RPS27B, Description = 40S ribosomal protein S27-2, PFAM = PF01667)' T '29.2.1.2.1.27' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S27' 'niben101scf01818_779840-782847' '(at3g61110 : 161.0) Arabidopsis ribosomal protein; ribosomal protein S27 (RS27A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein, zinc-binding domain (InterPro:IPR011332), Ribosomal protein S27e (InterPro:IPR000592); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT2G45710.1); Has 1035 Blast hits to 1035 proteins in 379 species: Archae - 136; Bacteria - 0; Metazoa - 447; Fungi - 151; Plants - 149; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (p47903|rs27_chlre : 141.0) 40S ribosomal protein S27 - Chlamydomonas reinhardtii & (gnl|cdd|36990 : 134.0) no description available & (gnl|cdd|65462 : 85.0) no description available & (reliability: 322.0) & (original description: Putative RPS27, Description = 40S ribosomal protein S27, PFAM = PF01667)' T '29.2.1.2.1.27' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S27' 'niben101scf01956_78496-84649' '(at2g47110 : 232.0) polyubiquitin gene; ubiquitin 6 (UBQ6); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: protein ubiquitination involved in ubiquitin-dependent protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: cytosolic small ribosomal subunit, intracellular; EXPRESSED IN: whole plant, male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ribosomal protein S27a (InterPro:IPR002906), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 5 (TAIR:AT3G62250.1). & (gnl|cdd|35228 : 209.0) no description available & (p69326|ubiq_wheat : 138.0) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|29205 : 135.0) no description available & (reliability: 440.0) & (original description: Putative r27a, Description = Ubiquitin-40S ribosomal protein S27a, PFAM = PF00240;PF01599)' T '29.2.1.2.1.27' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S27' 'niben101scf02131_93813-96222' '(at3g62250 : 131.0) ubiquitin 5 (UBQ5); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: protein ubiquitination involved in ubiquitin-dependent protein catabolic process, translation; LOCATED IN: cytosolic small ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ribosomal protein S27a (InterPro:IPR002906), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 6 (TAIR:AT2G47110.2); Has 12703 Blast hits to 7391 proteins in 781 species: Archae - 108; Bacteria - 19; Metazoa - 5541; Fungi - 1408; Plants - 3106; Viruses - 188; Other Eukaryotes - 2333 (source: NCBI BLink). & (gnl|cdd|29205 : 122.0) no description available & (p69326|ubiq_wheat : 120.0) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|35228 : 120.0) no description available & (reliability: 260.0) & (original description: Putative ubb, Description = Polyubiquitin, PFAM = PF00240)' T '29.2.1.2.1.27' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S27' 'niben101scf03777_11285-13855' '(gnl|cdd|36990 : 121.0) no description available & (at3g61110 : 105.0) Arabidopsis ribosomal protein; ribosomal protein S27 (RS27A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein, zinc-binding domain (InterPro:IPR011332), Ribosomal protein S27e (InterPro:IPR000592); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT2G45710.1); Has 1035 Blast hits to 1035 proteins in 379 species: Archae - 136; Bacteria - 0; Metazoa - 447; Fungi - 151; Plants - 149; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (q96564|rs27_horvu : 99.0) 40S ribosomal protein S27 (Manganese efficiency-related protein 1) - Hordeum vulgare (Barley) & (gnl|cdd|65462 : 80.0) no description available & (reliability: 210.0) & (original description: Putative rps27, Description = 40S ribosomal protein S27, PFAM = PF01667)' T '29.2.1.2.1.27' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S27' 'niben101scf09097_26001-28518' '(gnl|cdd|36990 : 137.0) no description available & (at3g61110 : 134.0) Arabidopsis ribosomal protein; ribosomal protein S27 (RS27A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein, zinc-binding domain (InterPro:IPR011332), Ribosomal protein S27e (InterPro:IPR000592); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT2G45710.1); Has 1035 Blast hits to 1035 proteins in 379 species: Archae - 136; Bacteria - 0; Metazoa - 447; Fungi - 151; Plants - 149; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (q96564|rs27_horvu : 125.0) 40S ribosomal protein S27 (Manganese efficiency-related protein 1) - Hordeum vulgare (Barley) & (gnl|cdd|65462 : 84.2) no description available & (reliability: 268.0) & (original description: Putative RPS27B, Description = 40S ribosomal protein S27-2, PFAM = PF01667)' T '29.2.1.2.1.28' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S28' 'niben101scf01669_473453-475881' '(p46302|rs28_maize : 103.0) 40S ribosomal protein S28 - Zea mays (Maize) & (at5g64140 : 102.0) Encodes a putative ribosomal protein S28.; ribosomal protein S28 (RPS28); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S28e (InterPro:IPR000289); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT5G03850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85301 : 99.7) no description available & (gnl|cdd|38712 : 91.9) no description available & (reliability: 204.0) & (original description: Putative RPS28, Description = 40S ribosomal protein S28, PFAM = PF01200)' T '29.2.1.2.1.29' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S29' 'niben101scf01339_651265-654699' '(at4g33865 : 93.2) Ribosomal protein S14p/S29e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S14 (InterPro:IPR001209); BEST Arabidopsis thaliana protein match is: Ribosomal protein S14p/S29e family protein (TAIR:AT3G43980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative RPS29, Description = 40S ribosomal protein S29, PFAM = PF00253)' T '29.2.1.2.1.30' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S30' '' '' '29.2.1.2.1.31' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.SA' 'nbv0.3scaffold3056_47870-51938' '(o80377|rssa_dauca : 409.0) 40S ribosomal protein SA (p40) - Daucus carota (Carrot) & (at1g72370 : 390.0) acidic protein associated to 40S ribosomal subunit of ribosomes. Involved in polysome formation during active protein synthesis. Expressed in actively growing tissue.; 40s ribosomal protein SA (P40); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to salt stress, mature ribosome assembly, translation, response to osmotic stress; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S2 (InterPro:IPR001865), Ribosomal protein S2, conserved site (InterPro:IPR018130), Ribosomal protein S2, eukaryotic/archaeal (InterPro:IPR005707); BEST Arabidopsis thaliana protein match is: 40s ribosomal protein SA B (TAIR:AT3G04770.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36048 : 286.0) no description available & (gnl|cdd|84690 : 247.0) no description available & (reliability: 780.0) & (original description: Putative 179B, Description = 40S ribosomal protein SA, PFAM = PF00318;PF00318)' T '29.2.1.2.1.31' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.SA' 'niben044scf00016250ctg022_21-4372' '(o80377|rssa_dauca : 408.0) 40S ribosomal protein SA (p40) - Daucus carota (Carrot) & (at1g72370 : 388.0) acidic protein associated to 40S ribosomal subunit of ribosomes. Involved in polysome formation during active protein synthesis. Expressed in actively growing tissue.; 40s ribosomal protein SA (P40); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to salt stress, mature ribosome assembly, translation, response to osmotic stress; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S2 (InterPro:IPR001865), Ribosomal protein S2, conserved site (InterPro:IPR018130), Ribosomal protein S2, eukaryotic/archaeal (InterPro:IPR005707); BEST Arabidopsis thaliana protein match is: 40s ribosomal protein SA B (TAIR:AT3G04770.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36048 : 289.0) no description available & (gnl|cdd|84690 : 244.0) no description available & (reliability: 776.0) & (original description: Putative 179B, Description = 40S ribosomal protein SA, PFAM = PF00318;PF00318)' T '29.2.1.2.1.31' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.SA' 'niben101scf00338_854351-857955' '(o80377|rssa_dauca : 390.0) 40S ribosomal protein SA (p40) - Daucus carota (Carrot) & (at1g72370 : 384.0) acidic protein associated to 40S ribosomal subunit of ribosomes. Involved in polysome formation during active protein synthesis. Expressed in actively growing tissue.; 40s ribosomal protein SA (P40); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to salt stress, mature ribosome assembly, translation, response to osmotic stress; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S2 (InterPro:IPR001865), Ribosomal protein S2, conserved site (InterPro:IPR018130), Ribosomal protein S2, eukaryotic/archaeal (InterPro:IPR005707); BEST Arabidopsis thaliana protein match is: 40s ribosomal protein SA B (TAIR:AT3G04770.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36048 : 287.0) no description available & (gnl|cdd|84690 : 243.0) no description available & (reliability: 768.0) & (original description: Putative 179B, Description = 40S ribosomal protein SA, PFAM = PF00318;PF00318)' T '29.2.1.2.1.31' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.SA' 'niben101scf02003_103551-127114' '(o80377|rssa_dauca : 408.0) 40S ribosomal protein SA (p40) - Daucus carota (Carrot) & (at3g04770 : 390.0) 40s ribosomal protein SA B (RPSAb); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S2 (InterPro:IPR001865), Ribosomal protein S2, conserved site (InterPro:IPR018130), Ribosomal protein S2, eukaryotic/archaeal (InterPro:IPR005707); BEST Arabidopsis thaliana protein match is: 40s ribosomal protein SA (TAIR:AT1G72370.2); Has 3720 Blast hits to 3717 proteins in 1345 species: Archae - 262; Bacteria - 1764; Metazoa - 685; Fungi - 333; Plants - 227; Viruses - 0; Other Eukaryotes - 449 (source: NCBI BLink). & (gnl|cdd|36048 : 285.0) no description available & (gnl|cdd|84690 : 246.0) no description available & (reliability: 780.0) & (original description: Putative RPSA, Description = 40S ribosomal protein SA, PFAM = PF00318;PF00318)' T '29.2.1.2.1.53' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S3A' 'nbv0.3scaffold19349_30914-33514' '(p33444|rs3a_catro : 205.0) 40S ribosomal protein S3a (CYC07 protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g34670 : 201.0) Ribosomal protein S3Ae; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S3Ae, conserved site (InterPro:IPR018281), Ribosomal protein S3Ae (InterPro:IPR001593); BEST Arabidopsis thaliana protein match is: Ribosomal protein S3Ae (TAIR:AT3G04840.1); Has 1362 Blast hits to 1357 proteins in 408 species: Archae - 234; Bacteria - 1; Metazoa - 463; Fungi - 247; Plants - 191; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (gnl|cdd|36841 : 154.0) no description available & (gnl|cdd|85186 : 130.0) no description available & (reliability: 402.0) & (original description: Putative rps1, Description = 40S ribosomal protein S1, PFAM = PF01015)' T '29.2.1.2.1.53' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S3A' 'niben101scf01182_47131-51019' '(p33444|rs3a_catro : 401.0) 40S ribosomal protein S3a (CYC07 protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g34670 : 385.0) Ribosomal protein S3Ae; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S3Ae, conserved site (InterPro:IPR018281), Ribosomal protein S3Ae (InterPro:IPR001593); BEST Arabidopsis thaliana protein match is: Ribosomal protein S3Ae (TAIR:AT3G04840.1); Has 1362 Blast hits to 1357 proteins in 408 species: Archae - 234; Bacteria - 1; Metazoa - 463; Fungi - 247; Plants - 191; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (gnl|cdd|36841 : 321.0) no description available & (gnl|cdd|85186 : 311.0) no description available & (reliability: 770.0) & (original description: Putative cyc07, Description = 40S ribosomal protein S3a, PFAM = PF01015)' T '29.2.1.2.1.53' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S3A' 'niben101scf01249_651081-655460' '(p33444|rs3a_catro : 387.0) 40S ribosomal protein S3a (CYC07 protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g34670 : 368.0) Ribosomal protein S3Ae; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S3Ae, conserved site (InterPro:IPR018281), Ribosomal protein S3Ae (InterPro:IPR001593); BEST Arabidopsis thaliana protein match is: Ribosomal protein S3Ae (TAIR:AT3G04840.1); Has 1362 Blast hits to 1357 proteins in 408 species: Archae - 234; Bacteria - 1; Metazoa - 463; Fungi - 247; Plants - 191; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (gnl|cdd|36841 : 321.0) no description available & (gnl|cdd|85186 : 312.0) no description available & (reliability: 736.0) & (original description: Putative cyc07, Description = 40S ribosomal protein S3a, PFAM = PF01015)' T '29.2.1.2.1.53' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S3A' 'niben101scf05084_1388-6680' '(p33444|rs3a_catro : 400.0) 40S ribosomal protein S3a (CYC07 protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g34670 : 386.0) Ribosomal protein S3Ae; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S3Ae, conserved site (InterPro:IPR018281), Ribosomal protein S3Ae (InterPro:IPR001593); BEST Arabidopsis thaliana protein match is: Ribosomal protein S3Ae (TAIR:AT3G04840.1); Has 1362 Blast hits to 1357 proteins in 408 species: Archae - 234; Bacteria - 1; Metazoa - 463; Fungi - 247; Plants - 191; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (gnl|cdd|36841 : 320.0) no description available & (gnl|cdd|85186 : 311.0) no description available & (reliability: 772.0) & (original description: Putative cyc07, Description = 40S ribosomal protein S3a, PFAM = PF01015)' T '29.2.1.2.1.53' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S3A' 'niben101scf07165_243880-249187' '(p33444|rs3a_catro : 412.0) 40S ribosomal protein S3a (CYC07 protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g34670 : 396.0) Ribosomal protein S3Ae; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S3Ae, conserved site (InterPro:IPR018281), Ribosomal protein S3Ae (InterPro:IPR001593); BEST Arabidopsis thaliana protein match is: Ribosomal protein S3Ae (TAIR:AT3G04840.1); Has 1362 Blast hits to 1357 proteins in 408 species: Archae - 234; Bacteria - 1; Metazoa - 463; Fungi - 247; Plants - 191; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (gnl|cdd|36841 : 320.0) no description available & (gnl|cdd|85186 : 311.0) no description available & (reliability: 792.0) & (original description: Putative cyc07, Description = 40S ribosomal protein S3a, PFAM = PF01015)' T '29.2.1.2.1.515' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S15A' 'niben101scf00206_174224-179661' '(at2g19720 : 210.0) ribosomal protein S15A B (rps15ab); CONTAINS InterPro DOMAIN/s: Ribosomal protein S8 (InterPro:IPR000630); BEST Arabidopsis thaliana protein match is: ribosomal protein S15A E (TAIR:AT4G29430.1); Has 3453 Blast hits to 3453 proteins in 1209 species: Archae - 277; Bacteria - 1569; Metazoa - 426; Fungi - 219; Plants - 302; Viruses - 0; Other Eukaryotes - 660 (source: NCBI BLink). & (gnl|cdd|36965 : 168.0) no description available & (q9at34|rs15a_dauca : 137.0) 40S ribosomal protein S15a - Daucus carota (Carrot) & (gnl|cdd|81268 : 132.0) no description available & (reliability: 420.0) & (original description: Putative RPS15AE, Description = 40S ribosomal protein S15a-5, PFAM = PF00410)' T '29.2.1.2.1.515' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S15A' 'niben101scf02452_43672-46784' '(at5g59850 : 254.0) Ribosomal protein S8 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cell wall, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8 (InterPro:IPR000630); BEST Arabidopsis thaliana protein match is: ribosomal protein S15A (TAIR:AT1G07770.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q00332|rs15a_brana : 251.0) 40S ribosomal protein S15a (PPCB8) - Brassica napus (Rape) & (gnl|cdd|36965 : 227.0) no description available & (gnl|cdd|81268 : 167.0) no description available & (reliability: 508.0) & (original description: Putative RPS15AA, Description = 40S ribosomal protein S15a-1, PFAM = PF00410)' T '29.2.1.2.1.515' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S15A' 'niben101scf05926_148919-223771' '(at5g59850 : 176.0) Ribosomal protein S8 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cell wall, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8 (InterPro:IPR000630); BEST Arabidopsis thaliana protein match is: ribosomal protein S15A (TAIR:AT1G07770.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q00332|rs15a_brana : 176.0) 40S ribosomal protein S15a (PPCB8) - Brassica napus (Rape) & (gnl|cdd|36965 : 160.0) no description available & (gnl|cdd|81268 : 122.0) no description available & (reliability: 352.0) & (original description: Putative rps22, Description = 40S ribosomal protein S15a, PFAM = PF00410)' T '29.2.1.2.2' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit' '' '' '29.2.1.2.2.1' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L1' '' '' '29.2.1.2.2.2' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L2' 'niben101scf06770_32013-34957' '(atmg00560 : 112.0) encodes a mitochondrial ribosomal protein L2, a constituent of the large subunit of the ribosomal complex; RPL2; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2 (InterPro:IPR002171); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G07715.1). & (p92812|rm02_orysa : 112.0) Mitochondrial 60S ribosomal protein L2 - Oryza sativa (Rice) & (reliability: 220.0) & (original description: Putative rpL2, Description = Ribosomal protein L2, PFAM = PF00181)' T '29.2.1.2.2.2' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L2' 'niben101scf10732_205961-208398' '(atmg00560 : 130.0) encodes a mitochondrial ribosomal protein L2, a constituent of the large subunit of the ribosomal complex; RPL2; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2 (InterPro:IPR002171); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G07715.1). & (p92812|rm02_orysa : 91.3) Mitochondrial 60S ribosomal protein L2 - Oryza sativa (Rice) & (reliability: 240.0) & (original description: Putative rpL2, Description = Ribosomal protein L2, PFAM = )' T '29.2.1.2.2.3' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L3' 'nbv0.3scaffold257_99708-104321' '(p35684|rl3_orysj : 660.0) 60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2 & (at1g61580 : 630.0) R-protein L3 B (RPL3B); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: ribosomal protein 1 (TAIR:AT1G43170.8); Has 2774 Blast hits to 2767 proteins in 966 species: Archae - 329; Bacteria - 1185; Metazoa - 455; Fungi - 168; Plants - 207; Viruses - 1; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|35965 : 566.0) no description available & (gnl|cdd|81334 : 309.0) no description available & (reliability: 1260.0) & (original description: Putative RPL3, Description = 60S ribosomal protein L3, PFAM = PF00297)' T '29.2.1.2.2.3' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L3' 'nbv0.3scaffold34618_714-4953' '(p35684|rl3_orysj : 652.0) 60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2 & (at1g61580 : 644.0) R-protein L3 B (RPL3B); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: ribosomal protein 1 (TAIR:AT1G43170.8); Has 2774 Blast hits to 2767 proteins in 966 species: Archae - 329; Bacteria - 1185; Metazoa - 455; Fungi - 168; Plants - 207; Viruses - 1; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|35965 : 573.0) no description available & (gnl|cdd|81334 : 314.0) no description available & (reliability: 1288.0) & (original description: Putative ARP2, Description = 60S ribosomal protein L3-2, PFAM = PF00297)' T '29.2.1.2.2.3' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L3' 'nbv0.5scaffold378_272591-277169' '(p35684|rl3_orysj : 660.0) 60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2 & (at1g43170 : 629.0) Encodes a cytoplasmic ribosomal protein.; ribosomal protein 1 (RP1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: R-protein L3 B (TAIR:AT1G61580.1). & (gnl|cdd|35965 : 565.0) no description available & (gnl|cdd|81334 : 311.0) no description available & (reliability: 1258.0) & (original description: Putative RPL3, Description = 60S ribosomal protein L3, PFAM = PF00297)' T '29.2.1.2.2.3' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L3' 'niben101scf00117_61127-66733' '(p35684|rl3_orysj : 654.0) 60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2 & (at1g61580 : 648.0) R-protein L3 B (RPL3B); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: ribosomal protein 1 (TAIR:AT1G43170.8); Has 2774 Blast hits to 2767 proteins in 966 species: Archae - 329; Bacteria - 1185; Metazoa - 455; Fungi - 168; Plants - 207; Viruses - 1; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|35965 : 575.0) no description available & (gnl|cdd|81334 : 313.0) no description available & (reliability: 1296.0) & (original description: Putative ARP2, Description = 60S ribosomal protein L3-2, PFAM = PF00297)' T '29.2.1.2.2.3' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L3' 'niben101scf02802_5724-10487' '(p35684|rl3_orysj : 643.0) 60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2 & (at1g61580 : 612.0) R-protein L3 B (RPL3B); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: ribosomal protein 1 (TAIR:AT1G43170.8); Has 2774 Blast hits to 2767 proteins in 966 species: Archae - 329; Bacteria - 1185; Metazoa - 455; Fungi - 168; Plants - 207; Viruses - 1; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|35965 : 554.0) no description available & (gnl|cdd|81334 : 297.0) no description available & (reliability: 1224.0) & (original description: Putative rpl3, Description = 60S ribosomal protein L3, PFAM = PF00297)' T '29.2.1.2.2.3' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L3' 'niben101scf14636_339014-343739' '(p35684|rl3_orysj : 664.0) 60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2 & (at1g61580 : 634.0) R-protein L3 B (RPL3B); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: ribosomal protein 1 (TAIR:AT1G43170.8); Has 2774 Blast hits to 2767 proteins in 966 species: Archae - 329; Bacteria - 1185; Metazoa - 455; Fungi - 168; Plants - 207; Viruses - 1; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|35965 : 570.0) no description available & (gnl|cdd|81334 : 307.0) no description available & (reliability: 1268.0) & (original description: Putative RPL3, Description = 60S ribosomal protein L3, PFAM = PF00297)' T '29.2.1.2.2.5' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L5' 'nbv0.3scaffold66042_1-4809' '(q6unt2|rl5_cucsa : 395.0) 60S ribosomal protein L5 - Cucumis sativus (Cucumber) & (at3g25520 : 389.0) Encodes ribosomal protein L5 that binds to 5S ribosomal RNA and in involved in its export from the nucleus to the cytoplasm. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2.; ribosomal protein L5 (ATL5); CONTAINS InterPro DOMAIN/s: Ribosomal protein L5, eukaryotic (InterPro:IPR005485), Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: ribosomal protein L5 B (TAIR:AT5G39740.2). & (gnl|cdd|36093 : 332.0) no description available & (gnl|cdd|82684 : 148.0) no description available & (reliability: 778.0) & (original description: Putative ATL5, Description = 60S ribosomal protein L5-1, PFAM = PF17144;PF14204)' T '29.2.1.2.2.5' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L5' 'niben044scf00009301ctg025_635-5270' '(q6unt2|rl5_cucsa : 350.0) 60S ribosomal protein L5 - Cucumis sativus (Cucumber) & (at3g25520 : 345.0) Encodes ribosomal protein L5 that binds to 5S ribosomal RNA and in involved in its export from the nucleus to the cytoplasm. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2.; ribosomal protein L5 (ATL5); CONTAINS InterPro DOMAIN/s: Ribosomal protein L5, eukaryotic (InterPro:IPR005485), Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: ribosomal protein L5 B (TAIR:AT5G39740.2). & (gnl|cdd|36093 : 262.0) no description available & (gnl|cdd|82684 : 116.0) no description available & (reliability: 690.0) & (original description: Putative rpl5, Description = Small nucleolar RNA, C/D box 21, PFAM = PF17144;PF14204)' T '29.2.1.2.2.5' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L5' 'niben101scf01148_195423-200038' '(q6unt2|rl5_cucsa : 414.0) 60S ribosomal protein L5 - Cucumis sativus (Cucumber) & (at3g25520 : 408.0) Encodes ribosomal protein L5 that binds to 5S ribosomal RNA and in involved in its export from the nucleus to the cytoplasm. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2.; ribosomal protein L5 (ATL5); CONTAINS InterPro DOMAIN/s: Ribosomal protein L5, eukaryotic (InterPro:IPR005485), Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: ribosomal protein L5 B (TAIR:AT5G39740.2). & (gnl|cdd|36093 : 335.0) no description available & (gnl|cdd|82684 : 147.0) no description available & (reliability: 816.0) & (original description: Putative RPL5A, Description = 60S ribosomal protein L5-1, PFAM = PF17144;PF14204)' T '29.2.1.2.2.5' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L5' 'niben101scf02098_342823-347732' '(q6unt2|rl5_cucsa : 399.0) 60S ribosomal protein L5 - Cucumis sativus (Cucumber) & (at3g25520 : 395.0) Encodes ribosomal protein L5 that binds to 5S ribosomal RNA and in involved in its export from the nucleus to the cytoplasm. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2.; ribosomal protein L5 (ATL5); CONTAINS InterPro DOMAIN/s: Ribosomal protein L5, eukaryotic (InterPro:IPR005485), Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: ribosomal protein L5 B (TAIR:AT5G39740.2). & (gnl|cdd|36093 : 334.0) no description available & (gnl|cdd|82684 : 149.0) no description available & (reliability: 790.0) & (original description: Putative RPL5, Description = 60S ribosomal protein L5, PFAM = PF14204;PF17144)' T '29.2.1.2.2.5' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L5' 'niben101scf02309_397262-399907' '(p51409|rm05_soltu : 328.0) Mitochondrial 60S ribosomal protein L5 - Solanum tuberosum (Potato) & (atmg00210 : 303.0) encodes a mitochondrial ribosomal protein L5, a constituent of the large subunit of the ribosomal complex; ribosomal protein L5 (RPL5); CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, N-terminal (InterPro:IPR020927); BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein (TAIR:AT2G07725.1). & (reliability: 606.0) & (original description: Putative RPL5, Description = 60S ribosomal protein L5, mitochondrial, PFAM = )' T '29.2.1.2.2.5' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L5' 'niben101scf04387_223670-228498' '(q6unt2|rl5_cucsa : 426.0) 60S ribosomal protein L5 - Cucumis sativus (Cucumber) & (at3g25520 : 411.0) Encodes ribosomal protein L5 that binds to 5S ribosomal RNA and in involved in its export from the nucleus to the cytoplasm. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2.; ribosomal protein L5 (ATL5); CONTAINS InterPro DOMAIN/s: Ribosomal protein L5, eukaryotic (InterPro:IPR005485), Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: ribosomal protein L5 B (TAIR:AT5G39740.2). & (gnl|cdd|36093 : 332.0) no description available & (gnl|cdd|82684 : 148.0) no description available & (reliability: 822.0) & (original description: Putative rpl5a, Description = Ribosomal protein L5a, PFAM = PF14204;PF17144)' T '29.2.1.2.2.5' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L5' 'niben101scf04436_1367116-1372319' '(q6unt2|rl5_cucsa : 414.0) 60S ribosomal protein L5 - Cucumis sativus (Cucumber) & (at3g25520 : 404.0) Encodes ribosomal protein L5 that binds to 5S ribosomal RNA and in involved in its export from the nucleus to the cytoplasm. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2.; ribosomal protein L5 (ATL5); CONTAINS InterPro DOMAIN/s: Ribosomal protein L5, eukaryotic (InterPro:IPR005485), Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: ribosomal protein L5 B (TAIR:AT5G39740.2). & (gnl|cdd|36093 : 333.0) no description available & (gnl|cdd|82684 : 146.0) no description available & (reliability: 808.0) & (original description: Putative RPL5, Description = 60S ribosomal protein L5, PFAM = PF14204;PF17144)' T '29.2.1.2.2.5' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L5' 'niben101scf25294_1-1245' '(p51409|rm05_soltu : 305.0) Mitochondrial 60S ribosomal protein L5 - Solanum tuberosum (Potato) & (atmg00210 : 276.0) encodes a mitochondrial ribosomal protein L5, a constituent of the large subunit of the ribosomal complex; ribosomal protein L5 (RPL5); CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, N-terminal (InterPro:IPR020927); BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein (TAIR:AT2G07725.1). & (reliability: 552.0) & (original description: Putative RPL5, Description = 60S ribosomal protein L5, mitochondrial, PFAM = )' T '29.2.1.2.2.6' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L6' 'niben044scf00011769ctg008_249-2554' '(at2g18400 : 159.0) ribosomal protein L6 family protein; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6 (InterPro:IPR000702), Ribosomal protein L6, bacterial-type (InterPro:IPR019906), Ribosomal protein L6, alpha-beta domain (InterPro:IPR020040), Ribosomal protein L6, conserved site (InterPro:IPR002358); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family (TAIR:AT1G05190.1); Has 7681 Blast hits to 7681 proteins in 2698 species: Archae - 1; Bacteria - 5446; Metazoa - 4; Fungi - 120; Plants - 122; Viruses - 0; Other Eukaryotes - 1988 (source: NCBI BLink). & (p26861|rm06_marpo : 140.0) Mitochondrial 60S ribosomal protein L6 - Marchantia polymorpha (Liverwort) & (gnl|cdd|38464 : 136.0) no description available & (gnl|cdd|81626 : 108.0) no description available & (reliability: 318.0) & (original description: Putative RPL6, Description = 60S ribosomal protein L6, mitochondrial, PFAM = PF00347)' T '29.2.1.2.2.6' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L6' 'niben044scf00015711ctg001_6311-8931' '(p34091|rl6_mescr : 186.0) 60S ribosomal protein L6 (YL16-like) - Mesembryanthemum crystallinum (Common ice plant) & (at1g18540 : 181.0) Ribosomal protein L6 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6, N-terminal (InterPro:IPR005568), Ribosomal protein L6E (InterPro:IPR000915); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family protein (TAIR:AT1G74050.1); Has 758 Blast hits to 758 proteins in 286 species: Archae - 33; Bacteria - 0; Metazoa - 332; Fungi - 149; Plants - 117; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative rpl6, Description = 60S ribosomal protein L6, PFAM = PF03868)' T '29.2.1.2.2.6' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L6' 'niben044scf00017572ctg005_9889-13305' '(p34091|rl6_mescr : 285.0) 60S ribosomal protein L6 (YL16-like) - Mesembryanthemum crystallinum (Common ice plant) & (at1g74050 : 269.0) Ribosomal protein L6 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, intracellular, plasma membrane, membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6, N-terminal (InterPro:IPR005568), Ribosomal protein L6E (InterPro:IPR000915); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family protein (TAIR:AT1G74060.1); Has 745 Blast hits to 745 proteins in 281 species: Archae - 16; Bacteria - 0; Metazoa - 335; Fungi - 149; Plants - 117; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|85278 : 133.0) no description available & (gnl|cdd|36907 : 99.0) no description available & (reliability: 538.0) & (original description: Putative RPL6, Description = 60S ribosomal protein L6, PFAM = PF01159;PF03868)' T '29.2.1.2.2.6' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L6' 'niben101scf01958_366935-370291' '(p34091|rl6_mescr : 293.0) 60S ribosomal protein L6 (YL16-like) - Mesembryanthemum crystallinum (Common ice plant) & (at1g74050 : 277.0) Ribosomal protein L6 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, intracellular, plasma membrane, membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6, N-terminal (InterPro:IPR005568), Ribosomal protein L6E (InterPro:IPR000915); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family protein (TAIR:AT1G74060.1); Has 745 Blast hits to 745 proteins in 281 species: Archae - 16; Bacteria - 0; Metazoa - 335; Fungi - 149; Plants - 117; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|85278 : 133.0) no description available & (gnl|cdd|36907 : 100.0) no description available & (reliability: 554.0) & (original description: Putative RPL6, Description = 60S ribosomal protein L6, PFAM = PF01159;PF03868)' T '29.2.1.2.2.6' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L6' 'niben101scf02915_246786-249091' '(at2g18400 : 154.0) ribosomal protein L6 family protein; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6 (InterPro:IPR000702), Ribosomal protein L6, bacterial-type (InterPro:IPR019906), Ribosomal protein L6, alpha-beta domain (InterPro:IPR020040), Ribosomal protein L6, conserved site (InterPro:IPR002358); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family (TAIR:AT1G05190.1); Has 7681 Blast hits to 7681 proteins in 2698 species: Archae - 1; Bacteria - 5446; Metazoa - 4; Fungi - 120; Plants - 122; Viruses - 0; Other Eukaryotes - 1988 (source: NCBI BLink). & (p26861|rm06_marpo : 138.0) Mitochondrial 60S ribosomal protein L6 - Marchantia polymorpha (Liverwort) & (gnl|cdd|38464 : 127.0) no description available & (gnl|cdd|81626 : 98.6) no description available & (reliability: 308.0) & (original description: Putative rpl6, Description = Ribosomal protein L6, PFAM = PF00347)' T '29.2.1.2.2.6' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L6' 'niben101scf03209_85178-88705' '(p34091|rl6_mescr : 283.0) 60S ribosomal protein L6 (YL16-like) - Mesembryanthemum crystallinum (Common ice plant) & (at1g74060 : 274.0) Ribosomal protein L6 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, nucleolus, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6, N-terminal (InterPro:IPR005568), Ribosomal protein L6E (InterPro:IPR000915); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family protein (TAIR:AT1G74050.1); Has 744 Blast hits to 744 proteins in 281 species: Archae - 16; Bacteria - 0; Metazoa - 333; Fungi - 149; Plants - 117; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|85278 : 133.0) no description available & (gnl|cdd|36907 : 99.0) no description available & (reliability: 548.0) & (original description: Putative RPL6, Description = 60S ribosomal protein L6, PFAM = PF03868;PF01159)' T '29.2.1.2.2.6' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L6' 'niben101scf03977_120357-123451' '(p34091|rl6_mescr : 278.0) 60S ribosomal protein L6 (YL16-like) - Mesembryanthemum crystallinum (Common ice plant) & (at1g74050 : 265.0) Ribosomal protein L6 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, intracellular, plasma membrane, membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6, N-terminal (InterPro:IPR005568), Ribosomal protein L6E (InterPro:IPR000915); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family protein (TAIR:AT1G74060.1); Has 745 Blast hits to 745 proteins in 281 species: Archae - 16; Bacteria - 0; Metazoa - 335; Fungi - 149; Plants - 117; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|85278 : 133.0) no description available & (gnl|cdd|36907 : 96.6) no description available & (reliability: 530.0) & (original description: Putative rpl6, Description = 60S ribosomal protein L6, PFAM = PF01159;PF03868)' T '29.2.1.2.2.6' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L6' 'niben101scf05969_223955-226260' '(at2g18400 : 160.0) ribosomal protein L6 family protein; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6 (InterPro:IPR000702), Ribosomal protein L6, bacterial-type (InterPro:IPR019906), Ribosomal protein L6, alpha-beta domain (InterPro:IPR020040), Ribosomal protein L6, conserved site (InterPro:IPR002358); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family (TAIR:AT1G05190.1); Has 7681 Blast hits to 7681 proteins in 2698 species: Archae - 1; Bacteria - 5446; Metazoa - 4; Fungi - 120; Plants - 122; Viruses - 0; Other Eukaryotes - 1988 (source: NCBI BLink). & (p26861|rm06_marpo : 141.0) Mitochondrial 60S ribosomal protein L6 - Marchantia polymorpha (Liverwort) & (gnl|cdd|38464 : 137.0) no description available & (gnl|cdd|81626 : 108.0) no description available & (reliability: 320.0) & (original description: Putative RPL6, Description = 60S ribosomal protein L6, mitochondrial, PFAM = PF00347)' T '29.2.1.2.2.6' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L6' 'niben101scf06142_6678-9889' '(at2g18400 : 164.0) ribosomal protein L6 family protein; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6 (InterPro:IPR000702), Ribosomal protein L6, bacterial-type (InterPro:IPR019906), Ribosomal protein L6, alpha-beta domain (InterPro:IPR020040), Ribosomal protein L6, conserved site (InterPro:IPR002358); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family (TAIR:AT1G05190.1); Has 7681 Blast hits to 7681 proteins in 2698 species: Archae - 1; Bacteria - 5446; Metazoa - 4; Fungi - 120; Plants - 122; Viruses - 0; Other Eukaryotes - 1988 (source: NCBI BLink). & (p26861|rm06_marpo : 142.0) Mitochondrial 60S ribosomal protein L6 - Marchantia polymorpha (Liverwort) & (gnl|cdd|38464 : 138.0) no description available & (gnl|cdd|81626 : 107.0) no description available & (reliability: 328.0) & (original description: Putative RPL6, Description = 60S ribosomal protein L6, mitochondrial, PFAM = PF00347)' T '29.2.1.2.2.7' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7' 'nbv0.3scaffold26939_634-4388' '(at3g13580 : 385.0) Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome, transcription regulator activity; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L7, eukaryotic (InterPro:IPR005998), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT2G01250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38394 : 269.0) no description available & (gnl|cdd|29435 : 235.0) no description available & (reliability: 770.0) & (original description: Putative rpl7, Description = Ribosomal protein L7, PFAM = PF08079;PF00327)' T '29.2.1.2.2.7' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7' 'nbv0.5scaffold7193_70419-75249' '(at2g44120 : 364.0) Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome, transcription regulator activity; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L7, eukaryotic (InterPro:IPR005998), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT2G01250.1); Has 1301 Blast hits to 1299 proteins in 392 species: Archae - 217; Bacteria - 1; Metazoa - 453; Fungi - 213; Plants - 195; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink). & (gnl|cdd|38394 : 274.0) no description available & (gnl|cdd|29435 : 240.0) no description available & (reliability: 728.0) & (original description: Putative RPL7B, Description = 60S ribosomal protein L7-2, PFAM = PF00327;PF08079)' T '29.2.1.2.2.7' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7' 'niben044scf00012928ctg002_4028-8666' '(at2g44120 : 363.0) Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome, transcription regulator activity; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L7, eukaryotic (InterPro:IPR005998), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT2G01250.1); Has 1301 Blast hits to 1299 proteins in 392 species: Archae - 217; Bacteria - 1; Metazoa - 453; Fungi - 213; Plants - 195; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink). & (gnl|cdd|38394 : 274.0) no description available & (gnl|cdd|29435 : 243.0) no description available & (reliability: 726.0) & (original description: Putative RPL7B, Description = 60S ribosomal protein L7-2, PFAM = PF00327;PF08079)' T '29.2.1.2.2.7' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7' 'niben101scf00715_119166-124506' '(at2g01250 : 235.0) Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, chloroplast, plasma membrane, large ribosomal subunit, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT3G13580.1); Has 1075 Blast hits to 1075 proteins in 310 species: Archae - 55; Bacteria - 0; Metazoa - 442; Fungi - 204; Plants - 182; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (gnl|cdd|29435 : 196.0) no description available & (gnl|cdd|38394 : 195.0) no description available & (reliability: 470.0) & (original description: Putative RPL7B, Description = 60S ribosomal protein L7-2, PFAM = PF00327;PF08079)' T '29.2.1.2.2.7' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7' 'niben101scf01585_161167-165638' '(at3g13580 : 388.0) Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome, transcription regulator activity; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L7, eukaryotic (InterPro:IPR005998), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT2G01250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38394 : 272.0) no description available & (gnl|cdd|29435 : 238.0) no description available & (reliability: 776.0) & (original description: Putative RPL7, Description = 60S ribosomal protein L7, PFAM = PF08079;PF00327)' T '29.2.1.2.2.7' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7' 'niben101scf03065_36668-40453' '(at2g44120 : 337.0) Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome, transcription regulator activity; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L7, eukaryotic (InterPro:IPR005998), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT2G01250.1); Has 1301 Blast hits to 1299 proteins in 392 species: Archae - 217; Bacteria - 1; Metazoa - 453; Fungi - 213; Plants - 195; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink). & (gnl|cdd|38394 : 247.0) no description available & (gnl|cdd|29435 : 236.0) no description available & (reliability: 674.0) & (original description: Putative rpl8, Description = Ribosomal protein L8, PFAM = PF08079;PF08079;PF00327)' T '29.2.1.2.2.7' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7' 'niben101scf06976_234740-239851' '(at1g80750 : 237.0) Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome, transcription regulator activity; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, nucleolus, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L7, eukaryotic (InterPro:IPR005998), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT3G13580.1); Has 1152 Blast hits to 1152 proteins in 343 species: Archae - 126; Bacteria - 0; Metazoa - 424; Fungi - 213; Plants - 191; Viruses - 0; Other Eukaryotes - 198 (source: NCBI BLink). & (gnl|cdd|29435 : 190.0) no description available & (gnl|cdd|38394 : 188.0) no description available & (reliability: 474.0) & (original description: Putative RPL7A, Description = 60S ribosomal protein L7-1, PFAM = PF00327;PF08079)' T '29.2.1.2.2.7' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7' 'niben101scf10798_50137-54018' '(at3g13580 : 388.0) Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome, transcription regulator activity; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L7, eukaryotic (InterPro:IPR005998), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT2G01250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38394 : 269.0) no description available & (gnl|cdd|29435 : 235.0) no description available & (reliability: 776.0) & (original description: Putative RPL7, Description = 60S ribosomal protein L7, PFAM = PF00327;PF08079)' T '29.2.1.2.2.8' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L8' 'niben044scf00015607ctg007_3715-9630' '(p25998|rl8_tobac : 429.0) 60S ribosomal protein L8 (60S ribosomal protein L2) - Nicotiana tabacum (Common tobacco) & (at4g36130 : 424.0) Ribosomal protein L2 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane, vacuole; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein L2 (InterPro:IPR002171), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein L2, C-terminal (InterPro:IPR022669), Ribosomal protein L2, domain 3 (InterPro:IPR014726), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2, conserved site (InterPro:IPR022671); BEST Arabidopsis thaliana protein match is: Ribosomal protein L2 family (TAIR:AT2G18020.1); Has 10610 Blast hits to 10603 proteins in 3612 species: Archae - 317; Bacteria - 5622; Metazoa - 462; Fungi - 292; Plants - 1215; Viruses - 0; Other Eukaryotes - 2702 (source: NCBI BLink). & (gnl|cdd|37520 : 376.0) no description available & (gnl|cdd|83109 : 260.0) no description available & (reliability: 848.0) & (original description: Putative RPL8A, Description = 60S ribosomal protein L8-1, PFAM = PF03947;PF00181)' T '29.2.1.2.2.8' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L8' 'niben101scf00858_496640-500514' '(p25998|rl8_tobac : 438.0) 60S ribosomal protein L8 (60S ribosomal protein L2) - Nicotiana tabacum (Common tobacco) & (at4g36130 : 431.0) Ribosomal protein L2 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane, vacuole; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein L2 (InterPro:IPR002171), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein L2, C-terminal (InterPro:IPR022669), Ribosomal protein L2, domain 3 (InterPro:IPR014726), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2, conserved site (InterPro:IPR022671); BEST Arabidopsis thaliana protein match is: Ribosomal protein L2 family (TAIR:AT2G18020.1); Has 10610 Blast hits to 10603 proteins in 3612 species: Archae - 317; Bacteria - 5622; Metazoa - 462; Fungi - 292; Plants - 1215; Viruses - 0; Other Eukaryotes - 2702 (source: NCBI BLink). & (gnl|cdd|37520 : 377.0) no description available & (gnl|cdd|83109 : 259.0) no description available & (reliability: 862.0) & (original description: Putative RPL8A, Description = 60S ribosomal protein L8-1, PFAM = PF00181;PF03947)' T '29.2.1.2.2.8' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L8' 'niben101scf02262_131713-135538' '(p25998|rl8_tobac : 432.0) 60S ribosomal protein L8 (60S ribosomal protein L2) - Nicotiana tabacum (Common tobacco) & (at4g36130 : 428.0) Ribosomal protein L2 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane, vacuole; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein L2 (InterPro:IPR002171), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein L2, C-terminal (InterPro:IPR022669), Ribosomal protein L2, domain 3 (InterPro:IPR014726), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2, conserved site (InterPro:IPR022671); BEST Arabidopsis thaliana protein match is: Ribosomal protein L2 family (TAIR:AT2G18020.1); Has 10610 Blast hits to 10603 proteins in 3612 species: Archae - 317; Bacteria - 5622; Metazoa - 462; Fungi - 292; Plants - 1215; Viruses - 0; Other Eukaryotes - 2702 (source: NCBI BLink). & (gnl|cdd|37520 : 375.0) no description available & (gnl|cdd|83109 : 260.0) no description available & (reliability: 856.0) & (original description: Putative RPL8A, Description = 60S ribosomal protein L8-1, PFAM = PF00181;PF03947)' T '29.2.1.2.2.8' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L8' 'niben101scf06332_350478-354324' '(p25998|rl8_tobac : 429.0) 60S ribosomal protein L8 (60S ribosomal protein L2) - Nicotiana tabacum (Common tobacco) & (at4g36130 : 425.0) Ribosomal protein L2 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane, vacuole; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein L2 (InterPro:IPR002171), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein L2, C-terminal (InterPro:IPR022669), Ribosomal protein L2, domain 3 (InterPro:IPR014726), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2, conserved site (InterPro:IPR022671); BEST Arabidopsis thaliana protein match is: Ribosomal protein L2 family (TAIR:AT2G18020.1); Has 10610 Blast hits to 10603 proteins in 3612 species: Archae - 317; Bacteria - 5622; Metazoa - 462; Fungi - 292; Plants - 1215; Viruses - 0; Other Eukaryotes - 2702 (source: NCBI BLink). & (gnl|cdd|37520 : 376.0) no description available & (gnl|cdd|83109 : 258.0) no description available & (reliability: 850.0) & (original description: Putative RPL8B, Description = 60S ribosomal protein L8-2, PFAM = PF03947;PF00181)' T '29.2.1.2.2.9' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L9' 'niben101scf00078_192122-196035' '(at1g33140 : 316.0) Encodes ribosomal protein L9. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2.; PIGGYBACK2 (PGY2); FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: adaxial/abaxial pattern formation, translation; LOCATED IN: cytosolic large ribosomal subunit, vacuole, large ribosomal subunit, membrane, chloroplast envelope; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6 (InterPro:IPR000702), Ribosomal protein L6, alpha-beta domain (InterPro:IPR020040), Ribosomal protein L6, conserved site-2 (InterPro:IPR002359); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family (TAIR:AT1G33120.1); Has 1644 Blast hits to 1643 proteins in 495 species: Archae - 312; Bacteria - 169; Metazoa - 422; Fungi - 179; Plants - 339; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (p30707|rl9_pea : 308.0) 60S ribosomal protein L9 (Gibberellin-regulated protein GA) - Pisum sativum (Garden pea) & (gnl|cdd|38465 : 203.0) no description available & (gnl|cdd|81628 : 132.0) no description available & (reliability: 632.0) & (original description: Putative RPL9B, Description = 60S ribosomal protein L9-1, PFAM = PF00347;PF00347)' T '29.2.1.2.2.9' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L9' 'niben101scf00168_883718-887755' '(at1g33140 : 315.0) Encodes ribosomal protein L9. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2.; PIGGYBACK2 (PGY2); FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: adaxial/abaxial pattern formation, translation; LOCATED IN: cytosolic large ribosomal subunit, vacuole, large ribosomal subunit, membrane, chloroplast envelope; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6 (InterPro:IPR000702), Ribosomal protein L6, alpha-beta domain (InterPro:IPR020040), Ribosomal protein L6, conserved site-2 (InterPro:IPR002359); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family (TAIR:AT1G33120.1); Has 1644 Blast hits to 1643 proteins in 495 species: Archae - 312; Bacteria - 169; Metazoa - 422; Fungi - 179; Plants - 339; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (p49210|rl9_orysa : 304.0) 60S ribosomal protein L9 - Oryza sativa (Rice) & (gnl|cdd|38465 : 202.0) no description available & (gnl|cdd|81628 : 132.0) no description available & (reliability: 630.0) & (original description: Putative RPL9D, Description = 60S ribosomal protein L9-2, PFAM = PF00347;PF00347)' T '29.2.1.2.2.9' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L9' 'niben101scf03321_447770-451765' '(at1g33140 : 315.0) Encodes ribosomal protein L9. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2.; PIGGYBACK2 (PGY2); FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: adaxial/abaxial pattern formation, translation; LOCATED IN: cytosolic large ribosomal subunit, vacuole, large ribosomal subunit, membrane, chloroplast envelope; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6 (InterPro:IPR000702), Ribosomal protein L6, alpha-beta domain (InterPro:IPR020040), Ribosomal protein L6, conserved site-2 (InterPro:IPR002359); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family (TAIR:AT1G33120.1); Has 1644 Blast hits to 1643 proteins in 495 species: Archae - 312; Bacteria - 169; Metazoa - 422; Fungi - 179; Plants - 339; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (p30707|rl9_pea : 308.0) 60S ribosomal protein L9 (Gibberellin-regulated protein GA) - Pisum sativum (Garden pea) & (gnl|cdd|38465 : 200.0) no description available & (gnl|cdd|81628 : 133.0) no description available & (reliability: 630.0) & (original description: Putative RPL9B, Description = 60S ribosomal protein L9-1, PFAM = PF00347;PF00347)' T '29.2.1.2.2.10' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10' 'niben044scf00020850ctg008_14695-20126' '(p93847|rl10_solme : 265.0) 60S ribosomal protein L10 (EQM) - Solanum melongena (Eggplant) (Aubergine) & (at1g26910 : 256.0) Ribosomal protein L16p/L10e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to UV-B, developmental process, translation; LOCATED IN: ribosome, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L10e (InterPro:IPR001197), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L10e, conserved site (InterPro:IPR018255); BEST Arabidopsis thaliana protein match is: Ribosomal protein L16p/L10e family protein (TAIR:AT1G14320.1); Has 1680 Blast hits to 1678 proteins in 606 species: Archae - 325; Bacteria - 13; Metazoa - 563; Fungi - 162; Plants - 159; Viruses - 0; Other Eukaryotes - 458 (source: NCBI BLink). & (gnl|cdd|36075 : 177.0) no description available & (gnl|cdd|81322 : 91.4) no description available & (reliability: 512.0) & (original description: Putative RPL10, Description = 60S ribosomal protein L10, PFAM = PF00252)' T '29.2.1.2.2.10' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10' 'niben101scf02316_359599-363332' '(p93847|rl10_solme : 422.0) 60S ribosomal protein L10 (EQM) - Solanum melongena (Eggplant) (Aubergine) & (at1g26910 : 384.0) Ribosomal protein L16p/L10e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to UV-B, developmental process, translation; LOCATED IN: ribosome, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L10e (InterPro:IPR001197), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L10e, conserved site (InterPro:IPR018255); BEST Arabidopsis thaliana protein match is: Ribosomal protein L16p/L10e family protein (TAIR:AT1G14320.1); Has 1680 Blast hits to 1678 proteins in 606 species: Archae - 325; Bacteria - 13; Metazoa - 563; Fungi - 162; Plants - 159; Viruses - 0; Other Eukaryotes - 458 (source: NCBI BLink). & (gnl|cdd|36075 : 288.0) no description available & (gnl|cdd|81322 : 183.0) no description available & (reliability: 768.0) & (original description: Putative RPL10, Description = 60S ribosomal protein L10, PFAM = PF00252)' T '29.2.1.2.2.10' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10' 'niben101scf02614_65470-69806' '(p93847|rl10_solme : 421.0) 60S ribosomal protein L10 (EQM) - Solanum melongena (Eggplant) (Aubergine) & (at1g26910 : 384.0) Ribosomal protein L16p/L10e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to UV-B, developmental process, translation; LOCATED IN: ribosome, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L10e (InterPro:IPR001197), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L10e, conserved site (InterPro:IPR018255); BEST Arabidopsis thaliana protein match is: Ribosomal protein L16p/L10e family protein (TAIR:AT1G14320.1); Has 1680 Blast hits to 1678 proteins in 606 species: Archae - 325; Bacteria - 13; Metazoa - 563; Fungi - 162; Plants - 159; Viruses - 0; Other Eukaryotes - 458 (source: NCBI BLink). & (gnl|cdd|36075 : 288.0) no description available & (gnl|cdd|81322 : 183.0) no description available & (reliability: 768.0) & (original description: Putative SG12, Description = 60S ribosomal protein L10-2, PFAM = PF00252)' T '29.2.1.2.2.10' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10' 'niben101scf03983_137158-141355' '(p45635|rl101_orysa : 174.0) 60S ribosomal protein L10-1 (Putative tumor suppressor SC34) (Protein QM) - Oryza sativa (Rice) & (at1g66580 : 172.0) senescence associated gene 24 (SAG24); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to UV-B, translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L10e (InterPro:IPR001197), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L10e, conserved site (InterPro:IPR018255); BEST Arabidopsis thaliana protein match is: Ribosomal protein L16p/L10e family protein (TAIR:AT1G26910.1); Has 1679 Blast hits to 1677 proteins in 605 species: Archae - 325; Bacteria - 13; Metazoa - 562; Fungi - 162; Plants - 159; Viruses - 0; Other Eukaryotes - 458 (source: NCBI BLink). & (gnl|cdd|36075 : 123.0) no description available & (gnl|cdd|81322 : 88.0) no description available & (reliability: 344.0) & (original description: Putative rL10, Description = 60S ribosomal protein L10, PFAM = PF00252)' T '29.2.1.2.2.11' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L11' 'niben101scf01250_119198-123490' '(at2g42740 : 319.0) encodes a cytosolic ribosomal protein L16, which is a constituent of 60S large ribosomal complex. Gene is expressed in root stele and anthers and expression is induced by auxin treatment.; ribosomal protein large subunit 16A (RPL16A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, nucleolus, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, N-terminal (InterPro:IPR020927), Ribosomal protein L5, C-terminal (InterPro:IPR020928); BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein (TAIR:AT5G45775.2); Has 7901 Blast hits to 7901 proteins in 2837 species: Archae - 312; Bacteria - 5129; Metazoa - 255; Fungi - 163; Plants - 278; Viruses - 0; Other Eukaryotes - 1764 (source: NCBI BLink). & (p46287|rl11_medsa : 319.0) 60S ribosomal protein L11 (L5) - Medicago sativa (Alfalfa) & (gnl|cdd|35618 : 305.0) no description available & (gnl|cdd|81331 : 212.0) no description available & (reliability: 638.0) & (original description: Putative RPL11A, Description = 60S ribosomal protein L11-1, PFAM = PF00281;PF00673)' T '29.2.1.2.2.11' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L11' 'niben101scf02381_840822-844526' '(at5g45775 : 320.0) Ribosomal L5P family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, vacuole; EXPRESSED IN: male gametophyte, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, N-terminal (InterPro:IPR020927), Ribosomal protein L5, C-terminal (InterPro:IPR020928); BEST Arabidopsis thaliana protein match is: ribosomal protein L16B (TAIR:AT4G18730.1); Has 7854 Blast hits to 7854 proteins in 2814 species: Archae - 312; Bacteria - 5083; Metazoa - 254; Fungi - 163; Plants - 278; Viruses - 0; Other Eukaryotes - 1764 (source: NCBI BLink). & (p46287|rl11_medsa : 317.0) 60S ribosomal protein L11 (L5) - Medicago sativa (Alfalfa) & (gnl|cdd|35618 : 306.0) no description available & (gnl|cdd|81331 : 213.0) no description available & (reliability: 640.0) & (original description: Putative RPL11A, Description = 60S ribosomal protein L11-1, PFAM = PF00673;PF00281)' T '29.2.1.2.2.12' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L12' 'niben101scf00988_97554-100051' '(at5g60670 : 262.0) Ribosomal protein L11 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11, C-terminal domain (InterPro:IPR020783), Ribosomal protein L11, N-terminal domain (InterPro:IPR020784), Ribosomal protein L11, conserved site (InterPro:IPR020785), Ribosomal protein L11 (InterPro:IPR000911); BEST Arabidopsis thaliana protein match is: Ribosomal protein L11 family protein (TAIR:AT3G53430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36104 : 243.0) no description available & (p50884|rl12_chlre : 219.0) 60S ribosomal protein L12 (Fragment) - Chlamydomonas reinhardtii & (gnl|cdd|47926 : 129.0) no description available & (reliability: 524.0) & (original description: Putative RPL12, Description = 60S ribosomal protein L12, PFAM = PF03946;PF00298)' T '29.2.1.2.2.12' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L12' 'niben101scf01911_238612-241109' '(at5g60670 : 262.0) Ribosomal protein L11 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11, C-terminal domain (InterPro:IPR020783), Ribosomal protein L11, N-terminal domain (InterPro:IPR020784), Ribosomal protein L11, conserved site (InterPro:IPR020785), Ribosomal protein L11 (InterPro:IPR000911); BEST Arabidopsis thaliana protein match is: Ribosomal protein L11 family protein (TAIR:AT3G53430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36104 : 241.0) no description available & (p50884|rl12_chlre : 219.0) 60S ribosomal protein L12 (Fragment) - Chlamydomonas reinhardtii & (gnl|cdd|47926 : 130.0) no description available & (reliability: 524.0) & (original description: Putative rpL12e, Description = Ribosomal protein L12e, PFAM = PF03946;PF00298)' T '29.2.1.2.2.12' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L12' 'niben101scf05051_315821-318318' '(at5g60670 : 263.0) Ribosomal protein L11 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11, C-terminal domain (InterPro:IPR020783), Ribosomal protein L11, N-terminal domain (InterPro:IPR020784), Ribosomal protein L11, conserved site (InterPro:IPR020785), Ribosomal protein L11 (InterPro:IPR000911); BEST Arabidopsis thaliana protein match is: Ribosomal protein L11 family protein (TAIR:AT3G53430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36104 : 243.0) no description available & (p50884|rl12_chlre : 219.0) 60S ribosomal protein L12 (Fragment) - Chlamydomonas reinhardtii & (gnl|cdd|47926 : 131.0) no description available & (reliability: 526.0) & (original description: Putative RPL12, Description = 60S ribosomal protein L12, PFAM = PF00298;PF03946)' T '29.2.1.2.2.13' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13' 'nbv0.5scaffold1842_215002-218070' '(at3g49010 : 284.0) Encodes 60S ribosomal protein L13. Homolog of human breast basic conserved 1 (BBC1).; breast basic conserved 1 (BBC1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13e (InterPro:IPR001380); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13e family protein (TAIR:AT5G23900.1); Has 742 Blast hits to 736 proteins in 276 species: Archae - 0; Bacteria - 0; Metazoa - 295; Fungi - 161; Plants - 147; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (p41129|rl132_brana : 281.0) 60S ribosomal protein L13-2 (Cold-induced protein C24B) - Brassica napus (Rape) & (gnl|cdd|38505 : 271.0) no description available & (gnl|cdd|65117 : 251.0) no description available & (reliability: 568.0) & (original description: Putative RPL13, Description = 60S ribosomal protein L13, PFAM = PF01294)' T '29.2.1.2.2.13' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13' 'niben101scf02249_274664-631621' '(at3g49010 : 147.0) Encodes 60S ribosomal protein L13. Homolog of human breast basic conserved 1 (BBC1).; breast basic conserved 1 (BBC1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13e (InterPro:IPR001380); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13e family protein (TAIR:AT5G23900.1); Has 742 Blast hits to 736 proteins in 276 species: Archae - 0; Bacteria - 0; Metazoa - 295; Fungi - 161; Plants - 147; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (p41129|rl132_brana : 136.0) 60S ribosomal protein L13-2 (Cold-induced protein C24B) - Brassica napus (Rape) & (gnl|cdd|38505 : 135.0) no description available & (gnl|cdd|65117 : 114.0) no description available & (reliability: 294.0) & (original description: Putative bbc1, Description = 60S ribosomal protein L13, PFAM = PF01294)' T '29.2.1.2.2.13' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13' 'niben101scf03293_227884-230316' '(at3g49010 : 138.0) Encodes 60S ribosomal protein L13. Homolog of human breast basic conserved 1 (BBC1).; breast basic conserved 1 (BBC1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13e (InterPro:IPR001380); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13e family protein (TAIR:AT5G23900.1); Has 742 Blast hits to 736 proteins in 276 species: Archae - 0; Bacteria - 0; Metazoa - 295; Fungi - 161; Plants - 147; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (p41129|rl132_brana : 137.0) 60S ribosomal protein L13-2 (Cold-induced protein C24B) - Brassica napus (Rape) & (gnl|cdd|38505 : 119.0) no description available & (gnl|cdd|65117 : 117.0) no description available & (reliability: 276.0) & (original description: Putative rl13, Description = 60S ribosomal protein L13, PFAM = PF01294)' T '29.2.1.2.2.13' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13' 'niben101scf05018_11788-15018' '(at3g49010 : 298.0) Encodes 60S ribosomal protein L13. Homolog of human breast basic conserved 1 (BBC1).; breast basic conserved 1 (BBC1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13e (InterPro:IPR001380); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13e family protein (TAIR:AT5G23900.1); Has 742 Blast hits to 736 proteins in 276 species: Archae - 0; Bacteria - 0; Metazoa - 295; Fungi - 161; Plants - 147; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (p41129|rl132_brana : 295.0) 60S ribosomal protein L13-2 (Cold-induced protein C24B) - Brassica napus (Rape) & (gnl|cdd|38505 : 273.0) no description available & (gnl|cdd|65117 : 256.0) no description available & (reliability: 596.0) & (original description: Putative rpl13, Description = 60S ribosomal protein L13, PFAM = PF01294)' T '29.2.1.2.2.13' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13' 'niben101scf08478_327964-333402' '(at3g01790 : 270.0) Ribosomal protein L13 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13, bacterial-type (InterPro:IPR005823), Ribosomal protein L13 (InterPro:IPR005822); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT1G78630.1); Has 7701 Blast hits to 7701 proteins in 2675 species: Archae - 7; Bacteria - 5222; Metazoa - 123; Fungi - 136; Plants - 125; Viruses - 0; Other Eukaryotes - 2088 (source: NCBI BLink). & (gnl|cdd|82862 : 157.0) no description available & (gnl|cdd|38413 : 154.0) no description available & (p12629|rk13_spiol : 85.5) 50S ribosomal protein L13, chloroplast precursor (CL13) - Spinacia oleracea (Spinach) & (reliability: 540.0) & (original description: Putative rplM, Description = 50S ribosomal protein L13, PFAM = PF00572)' T '29.2.1.2.2.13' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13' 'niben101scf09242_1-3384' '(at3g49010 : 305.0) Encodes 60S ribosomal protein L13. Homolog of human breast basic conserved 1 (BBC1).; breast basic conserved 1 (BBC1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13e (InterPro:IPR001380); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13e family protein (TAIR:AT5G23900.1); Has 742 Blast hits to 736 proteins in 276 species: Archae - 0; Bacteria - 0; Metazoa - 295; Fungi - 161; Plants - 147; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (p41129|rl132_brana : 295.0) 60S ribosomal protein L13-2 (Cold-induced protein C24B) - Brassica napus (Rape) & (gnl|cdd|38505 : 267.0) no description available & (gnl|cdd|65117 : 256.0) no description available & (reliability: 610.0) & (original description: Putative RPL13B, Description = 60S ribosomal protein L13-1, PFAM = PF01294)' T '29.2.1.2.2.13' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13' 'niben101scf32453_20885-24033' '(at3g49010 : 282.0) Encodes 60S ribosomal protein L13. Homolog of human breast basic conserved 1 (BBC1).; breast basic conserved 1 (BBC1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13e (InterPro:IPR001380); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13e family protein (TAIR:AT5G23900.1); Has 742 Blast hits to 736 proteins in 276 species: Archae - 0; Bacteria - 0; Metazoa - 295; Fungi - 161; Plants - 147; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (p41129|rl132_brana : 281.0) 60S ribosomal protein L13-2 (Cold-induced protein C24B) - Brassica napus (Rape) & (gnl|cdd|38505 : 270.0) no description available & (gnl|cdd|65117 : 251.0) no description available & (reliability: 564.0) & (original description: Putative RPL13, Description = 60S ribosomal protein L13, PFAM = PF01294)' T '29.2.1.2.2.14' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L14' 'niben044scf00009111ctg015_696-5603' '(at4g27090 : 175.0) Ribosomal protein L14; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14 (InterPro:IPR002784); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14 (TAIR:AT2G20450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p55844|rl14_pea : 169.0) Probable 60 ribosomal protein L14 (Hydroxyproline-rich glycoprotein HRGP1) - Pisum sativum (Garden pea) & (gnl|cdd|38631 : 154.0) no description available & (gnl|cdd|65700 : 85.0) no description available & (reliability: 350.0) & (original description: Putative RPL14B, Description = 60S ribosomal protein L14-2, PFAM = PF01929)' T '29.2.1.2.2.14' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L14' 'niben101scf02243_73319-77160' '(at2g20450 : 174.0) Ribosomal protein L14; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, endoplasmic reticulum, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14 (InterPro:IPR002784); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14 (TAIR:AT4G27090.1); Has 732 Blast hits to 732 proteins in 320 species: Archae - 80; Bacteria - 0; Metazoa - 273; Fungi - 143; Plants - 110; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (p55844|rl14_pea : 173.0) Probable 60 ribosomal protein L14 (Hydroxyproline-rich glycoprotein HRGP1) - Pisum sativum (Garden pea) & (gnl|cdd|38631 : 150.0) no description available & (gnl|cdd|65700 : 84.6) no description available & (reliability: 348.0) & (original description: Putative rpl14, Description = 60S ribosomal protein L14, PFAM = PF01929)' T '29.2.1.2.2.14' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L14' 'niben101scf03229_122049-126395' '(at4g27090 : 177.0) Ribosomal protein L14; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14 (InterPro:IPR002784); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14 (TAIR:AT2G20450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p55844|rl14_pea : 169.0) Probable 60 ribosomal protein L14 (Hydroxyproline-rich glycoprotein HRGP1) - Pisum sativum (Garden pea) & (gnl|cdd|38631 : 155.0) no description available & (gnl|cdd|65700 : 83.4) no description available & (reliability: 354.0) & (original description: Putative RPL14B, Description = 60S ribosomal protein L14-2, PFAM = PF01929)' T '29.2.1.2.2.14' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L14' 'niben101scf05997_22933-26658' '(p55844|rl14_pea : 172.0) Probable 60 ribosomal protein L14 (Hydroxyproline-rich glycoprotein HRGP1) - Pisum sativum (Garden pea) & (at2g20450 : 171.0) Ribosomal protein L14; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, endoplasmic reticulum, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14 (InterPro:IPR002784); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14 (TAIR:AT4G27090.1); Has 732 Blast hits to 732 proteins in 320 species: Archae - 80; Bacteria - 0; Metazoa - 273; Fungi - 143; Plants - 110; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (gnl|cdd|38631 : 148.0) no description available & (gnl|cdd|65700 : 83.4) no description available & (reliability: 342.0) & (original description: Putative rpl14, Description = 60S ribosomal protein L14, PFAM = PF01929)' T '29.2.1.2.2.14' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L14' 'niben101scf09792_177620-182637' '(at4g27090 : 176.0) Ribosomal protein L14; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14 (InterPro:IPR002784); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14 (TAIR:AT2G20450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p55844|rl14_pea : 170.0) Probable 60 ribosomal protein L14 (Hydroxyproline-rich glycoprotein HRGP1) - Pisum sativum (Garden pea) & (gnl|cdd|38631 : 154.0) no description available & (gnl|cdd|65700 : 85.4) no description available & (reliability: 352.0) & (original description: Putative RPL14B, Description = 60S ribosomal protein L14-2, PFAM = PF01929)' T '29.2.1.2.2.15' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L15' 'niben101scf00781_373451-377311' '(o82528|rl15_pethy : 296.0) 60S ribosomal protein L15 - Petunia hybrida (Petunia) & (gnl|cdd|36891 : 296.0) no description available & (at4g16720 : 290.0) Ribosomal protein L23/L15e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L15e (InterPro:IPR000439), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L15e, conserved site (InterPro:IPR020925); BEST Arabidopsis thaliana protein match is: Ribosomal protein L23/L15e family protein (TAIR:AT4G17390.1); Has 1382 Blast hits to 1381 proteins in 431 species: Archae - 314; Bacteria - 0; Metazoa - 409; Fungi - 163; Plants - 282; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|64679 : 264.0) no description available & (reliability: 580.0) & (original description: Putative RPL15, Description = 60S ribosomal protein L15, PFAM = PF00827)' T '29.2.1.2.2.15' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L15' 'niben101scf02073_438153-442581' '(o82528|rl15_pethy : 296.0) 60S ribosomal protein L15 - Petunia hybrida (Petunia) & (gnl|cdd|36891 : 296.0) no description available & (at4g16720 : 286.0) Ribosomal protein L23/L15e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L15e (InterPro:IPR000439), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L15e, conserved site (InterPro:IPR020925); BEST Arabidopsis thaliana protein match is: Ribosomal protein L23/L15e family protein (TAIR:AT4G17390.1); Has 1382 Blast hits to 1381 proteins in 431 species: Archae - 314; Bacteria - 0; Metazoa - 409; Fungi - 163; Plants - 282; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|64679 : 265.0) no description available & (reliability: 572.0) & (original description: Putative RPL15, Description = 60S ribosomal protein L15, PFAM = PF00827)' T '29.2.1.2.2.15' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L15' 'niben101scf02182_1849849-1853956' '(o82528|rl15_pethy : 305.0) 60S ribosomal protein L15 - Petunia hybrida (Petunia) & (gnl|cdd|36891 : 296.0) no description available & (at4g16720 : 288.0) Ribosomal protein L23/L15e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L15e (InterPro:IPR000439), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L15e, conserved site (InterPro:IPR020925); BEST Arabidopsis thaliana protein match is: Ribosomal protein L23/L15e family protein (TAIR:AT4G17390.1); Has 1382 Blast hits to 1381 proteins in 431 species: Archae - 314; Bacteria - 0; Metazoa - 409; Fungi - 163; Plants - 282; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|64679 : 266.0) no description available & (reliability: 576.0) & (original description: Putative RPL15, Description = 60S ribosomal protein L15, PFAM = PF00827)' T '29.2.1.2.2.15' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L15' 'niben101scf02459_965810-971051' '(o82528|rl15_pethy : 296.0) 60S ribosomal protein L15 - Petunia hybrida (Petunia) & (gnl|cdd|36891 : 296.0) no description available & (at4g16720 : 285.0) Ribosomal protein L23/L15e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L15e (InterPro:IPR000439), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L15e, conserved site (InterPro:IPR020925); BEST Arabidopsis thaliana protein match is: Ribosomal protein L23/L15e family protein (TAIR:AT4G17390.1); Has 1382 Blast hits to 1381 proteins in 431 species: Archae - 314; Bacteria - 0; Metazoa - 409; Fungi - 163; Plants - 282; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|64679 : 265.0) no description available & (reliability: 570.0) & (original description: Putative RPL15, Description = 60S ribosomal protein L15, PFAM = PF00827)' T '29.2.1.2.2.15' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L15' 'niben101scf21171_15457-20125' '(o82528|rl15_pethy : 305.0) 60S ribosomal protein L15 - Petunia hybrida (Petunia) & (gnl|cdd|36891 : 295.0) no description available & (at4g16720 : 287.0) Ribosomal protein L23/L15e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L15e (InterPro:IPR000439), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L15e, conserved site (InterPro:IPR020925); BEST Arabidopsis thaliana protein match is: Ribosomal protein L23/L15e family protein (TAIR:AT4G17390.1); Has 1382 Blast hits to 1381 proteins in 431 species: Archae - 314; Bacteria - 0; Metazoa - 409; Fungi - 163; Plants - 282; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|64679 : 265.0) no description available & (reliability: 574.0) & (original description: Putative RPL15, Description = 60S ribosomal protein L15, PFAM = PF00827)' T '29.2.1.2.2.16' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L16' 'niben101scf01250_119198-123490' '(at2g42740 : 319.0) encodes a cytosolic ribosomal protein L16, which is a constituent of 60S large ribosomal complex. Gene is expressed in root stele and anthers and expression is induced by auxin treatment.; ribosomal protein large subunit 16A (RPL16A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, nucleolus, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, N-terminal (InterPro:IPR020927), Ribosomal protein L5, C-terminal (InterPro:IPR020928); BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein (TAIR:AT5G45775.2); Has 7901 Blast hits to 7901 proteins in 2837 species: Archae - 312; Bacteria - 5129; Metazoa - 255; Fungi - 163; Plants - 278; Viruses - 0; Other Eukaryotes - 1764 (source: NCBI BLink). & (p46287|rl11_medsa : 319.0) 60S ribosomal protein L11 (L5) - Medicago sativa (Alfalfa) & (gnl|cdd|35618 : 305.0) no description available & (gnl|cdd|81331 : 212.0) no description available & (reliability: 638.0) & (original description: Putative RPL11A, Description = 60S ribosomal protein L11-1, PFAM = PF00281;PF00673)' T '29.2.1.2.2.16' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L16' 'niben101scf02381_840822-844526' '(at5g45775 : 320.0) Ribosomal L5P family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, vacuole; EXPRESSED IN: male gametophyte, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, N-terminal (InterPro:IPR020927), Ribosomal protein L5, C-terminal (InterPro:IPR020928); BEST Arabidopsis thaliana protein match is: ribosomal protein L16B (TAIR:AT4G18730.1); Has 7854 Blast hits to 7854 proteins in 2814 species: Archae - 312; Bacteria - 5083; Metazoa - 254; Fungi - 163; Plants - 278; Viruses - 0; Other Eukaryotes - 1764 (source: NCBI BLink). & (p46287|rl11_medsa : 317.0) 60S ribosomal protein L11 (L5) - Medicago sativa (Alfalfa) & (gnl|cdd|35618 : 306.0) no description available & (gnl|cdd|81331 : 213.0) no description available & (reliability: 640.0) & (original description: Putative RPL11A, Description = 60S ribosomal protein L11-1, PFAM = PF00673;PF00281)' T '29.2.1.2.2.17' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L17' 'niben044scf00007070ctg012_8435-13053' '(at1g27400 : 280.0) Ribosomal protein L22p/L17e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22/L17, eukaryotic/archaeal (InterPro:IPR005721), Ribosomal protein L22/L17, conserved site (InterPro:IPR018260); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT1G67430.1); Has 2094 Blast hits to 2094 proteins in 650 species: Archae - 321; Bacteria - 492; Metazoa - 519; Fungi - 182; Plants - 156; Viruses - 0; Other Eukaryotes - 424 (source: NCBI BLink). & (p35267|rl172_horvu : 267.0) 60S ribosomal protein L17-2 - Hordeum vulgare (Barley) & (gnl|cdd|38563 : 212.0) no description available & (gnl|cdd|81333 : 136.0) no description available & (reliability: 560.0) & (original description: Putative RPL17A, Description = 60S ribosomal protein L17-1, PFAM = PF00237)' T '29.2.1.2.2.17' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L17' 'niben101scf05583_141341-147481' '(at1g27400 : 272.0) Ribosomal protein L22p/L17e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22/L17, eukaryotic/archaeal (InterPro:IPR005721), Ribosomal protein L22/L17, conserved site (InterPro:IPR018260); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT1G67430.1); Has 2094 Blast hits to 2094 proteins in 650 species: Archae - 321; Bacteria - 492; Metazoa - 519; Fungi - 182; Plants - 156; Viruses - 0; Other Eukaryotes - 424 (source: NCBI BLink). & (p35267|rl172_horvu : 258.0) 60S ribosomal protein L17-2 - Hordeum vulgare (Barley) & (gnl|cdd|38563 : 203.0) no description available & (gnl|cdd|81333 : 131.0) no description available & (reliability: 544.0) & (original description: Putative rpl17, Description = 60S ribosomal protein L17, PFAM = PF00237)' T '29.2.1.2.2.17' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L17' 'niben101scf05750_415804-422076' '(at1g27400 : 248.0) Ribosomal protein L22p/L17e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22/L17, eukaryotic/archaeal (InterPro:IPR005721), Ribosomal protein L22/L17, conserved site (InterPro:IPR018260); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT1G67430.1); Has 2094 Blast hits to 2094 proteins in 650 species: Archae - 321; Bacteria - 492; Metazoa - 519; Fungi - 182; Plants - 156; Viruses - 0; Other Eukaryotes - 424 (source: NCBI BLink). & (o48557|rl17_maize : 238.0) 60S ribosomal protein L17 - Zea mays (Maize) & (gnl|cdd|38563 : 204.0) no description available & (gnl|cdd|81333 : 134.0) no description available & (reliability: 496.0) & (original description: Putative RPL17, Description = 60S ribosomal protein L17, PFAM = PF00237)' T '29.2.1.2.2.17' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L17' 'niben101scf08544_105423-109065' '(at1g27400 : 286.0) Ribosomal protein L22p/L17e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22/L17, eukaryotic/archaeal (InterPro:IPR005721), Ribosomal protein L22/L17, conserved site (InterPro:IPR018260); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT1G67430.1); Has 2094 Blast hits to 2094 proteins in 650 species: Archae - 321; Bacteria - 492; Metazoa - 519; Fungi - 182; Plants - 156; Viruses - 0; Other Eukaryotes - 424 (source: NCBI BLink). & (p35267|rl172_horvu : 271.0) 60S ribosomal protein L17-2 - Hordeum vulgare (Barley) & (gnl|cdd|38563 : 211.0) no description available & (gnl|cdd|81333 : 138.0) no description available & (reliability: 572.0) & (original description: Putative RPL17A, Description = 60S ribosomal protein L17-1, PFAM = PF00237)' T '29.2.1.2.2.17' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L17' 'niben101scf10885_20981-25629' '(at1g27400 : 259.0) Ribosomal protein L22p/L17e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22/L17, eukaryotic/archaeal (InterPro:IPR005721), Ribosomal protein L22/L17, conserved site (InterPro:IPR018260); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT1G67430.1); Has 2094 Blast hits to 2094 proteins in 650 species: Archae - 321; Bacteria - 492; Metazoa - 519; Fungi - 182; Plants - 156; Viruses - 0; Other Eukaryotes - 424 (source: NCBI BLink). & (p35267|rl172_horvu : 243.0) 60S ribosomal protein L17-2 - Hordeum vulgare (Barley) & (gnl|cdd|38563 : 207.0) no description available & (gnl|cdd|81333 : 139.0) no description available & (reliability: 518.0) & (original description: Putative RPL17A, Description = 60S ribosomal protein L17-1, PFAM = PF00237)' T '29.2.1.2.2.17' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L17' 'niben101scf19230_212630-216793' '(at1g27400 : 236.0) Ribosomal protein L22p/L17e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22/L17, eukaryotic/archaeal (InterPro:IPR005721), Ribosomal protein L22/L17, conserved site (InterPro:IPR018260); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT1G67430.1); Has 2094 Blast hits to 2094 proteins in 650 species: Archae - 321; Bacteria - 492; Metazoa - 519; Fungi - 182; Plants - 156; Viruses - 0; Other Eukaryotes - 424 (source: NCBI BLink). & (o48557|rl17_maize : 223.0) 60S ribosomal protein L17 - Zea mays (Maize) & (gnl|cdd|38563 : 201.0) no description available & (gnl|cdd|81333 : 131.0) no description available & (reliability: 472.0) & (original description: Putative rpl17, Description = 60S ribosomal protein L17, PFAM = PF00237)' T '29.2.1.2.2.18' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18' 'nbv0.3scaffold13930_19494-23091' '(at5g27850 : 270.0) Ribosomal protein L18e/L15 superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, vacuole, large ribosomal subunit, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e (InterPro:IPR000039), Ribosomal protein L18e/L15 (InterPro:IPR021131); BEST Arabidopsis thaliana protein match is: ribosomal protein L18 (TAIR:AT3G05590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o65729|rl18_cicar : 240.0) 60S ribosomal protein L18 (Fragment) - Cicer arietinum (Chickpea) (Garbanzo) & (gnl|cdd|36926 : 228.0) no description available & (gnl|cdd|85054 : 205.0) no description available & (reliability: 540.0) & (original description: Putative rpl18, Description = 60S ribosomal protein L18, PFAM = PF17135)' T '29.2.1.2.2.18' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18' 'niben044scf00007750ctg012_1-4204' '(at3g05590 : 292.0) Encodes cytoplasmic ribosomal protein L18.; ribosomal protein L18 (RPL18); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, plasma membrane, chloroplast, vacuole, large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L18e (InterPro:IPR000039); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18e/L15 superfamily protein (TAIR:AT5G27850.1); Has 786 Blast hits to 785 proteins in 305 species: Archae - 30; Bacteria - 0; Metazoa - 334; Fungi - 154; Plants - 130; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (o65729|rl18_cicar : 281.0) 60S ribosomal protein L18 (Fragment) - Cicer arietinum (Chickpea) (Garbanzo) & (gnl|cdd|36926 : 260.0) no description available & (gnl|cdd|85054 : 239.0) no description available & (reliability: 584.0) & (original description: Putative RPL18B, Description = 60S ribosomal protein L18-2, PFAM = PF17135)' T '29.2.1.2.2.18' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18' 'niben044scf00021061ctg009_320-4598' '(at3g05590 : 262.0) Encodes cytoplasmic ribosomal protein L18.; ribosomal protein L18 (RPL18); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, plasma membrane, chloroplast, vacuole, large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L18e (InterPro:IPR000039); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18e/L15 superfamily protein (TAIR:AT5G27850.1); Has 786 Blast hits to 785 proteins in 305 species: Archae - 30; Bacteria - 0; Metazoa - 334; Fungi - 154; Plants - 130; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|36926 : 256.0) no description available & (o65729|rl18_cicar : 249.0) 60S ribosomal protein L18 (Fragment) - Cicer arietinum (Chickpea) (Garbanzo) & (gnl|cdd|85054 : 236.0) no description available & (reliability: 524.0) & (original description: Putative RpL18, Description = 60S ribosomal protein L18, PFAM = PF17135)' T '29.2.1.2.2.18' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18' 'niben101scf00369_1804313-1811909' '(at3g05590 : 265.0) Encodes cytoplasmic ribosomal protein L18.; ribosomal protein L18 (RPL18); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, plasma membrane, chloroplast, vacuole, large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L18e (InterPro:IPR000039); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18e/L15 superfamily protein (TAIR:AT5G27850.1); Has 786 Blast hits to 785 proteins in 305 species: Archae - 30; Bacteria - 0; Metazoa - 334; Fungi - 154; Plants - 130; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|36926 : 257.0) no description available & (o65729|rl18_cicar : 251.0) 60S ribosomal protein L18 (Fragment) - Cicer arietinum (Chickpea) (Garbanzo) & (gnl|cdd|85054 : 236.0) no description available & (reliability: 530.0) & (original description: Putative RPL18B, Description = 60S ribosomal protein L18-2, PFAM = PF17135)' T '29.2.1.2.2.18' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18' 'niben101scf05298_691172-695635' '(at3g05590 : 291.0) Encodes cytoplasmic ribosomal protein L18.; ribosomal protein L18 (RPL18); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, plasma membrane, chloroplast, vacuole, large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L18e (InterPro:IPR000039); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18e/L15 superfamily protein (TAIR:AT5G27850.1); Has 786 Blast hits to 785 proteins in 305 species: Archae - 30; Bacteria - 0; Metazoa - 334; Fungi - 154; Plants - 130; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (o65729|rl18_cicar : 280.0) 60S ribosomal protein L18 (Fragment) - Cicer arietinum (Chickpea) (Garbanzo) & (gnl|cdd|36926 : 259.0) no description available & (gnl|cdd|85054 : 238.0) no description available & (reliability: 582.0) & (original description: Putative RPL18B, Description = 60S ribosomal protein L18-2, PFAM = PF17135)' T '29.2.1.2.2.18' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18' 'niben101scf10737_73597-77194' '(at3g05590 : 298.0) Encodes cytoplasmic ribosomal protein L18.; ribosomal protein L18 (RPL18); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, plasma membrane, chloroplast, vacuole, large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L18e (InterPro:IPR000039); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18e/L15 superfamily protein (TAIR:AT5G27850.1); Has 786 Blast hits to 785 proteins in 305 species: Archae - 30; Bacteria - 0; Metazoa - 334; Fungi - 154; Plants - 130; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (o65729|rl18_cicar : 271.0) 60S ribosomal protein L18 (Fragment) - Cicer arietinum (Chickpea) (Garbanzo) & (gnl|cdd|36926 : 255.0) no description available & (gnl|cdd|85054 : 234.0) no description available & (reliability: 596.0) & (original description: Putative RPL18B, Description = 60S ribosomal protein L18-2, PFAM = PF17135)' T '29.2.1.2.2.19' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L19' 'niben044scf00003339ctg008_1991-5666' '(at3g16780 : 214.0) Ribosomal protein L19e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19/L19e (InterPro:IPR000196), Ribosomal protein L19/L19e, domain 3 (InterPro:IPR015974), Ribosomal protein L19/L19e, domain 1 (InterPro:IPR015972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19e family protein (TAIR:AT4G02230.1); Has 1139 Blast hits to 1139 proteins in 410 species: Archae - 291; Bacteria - 0; Metazoa - 317; Fungi - 171; Plants - 158; Viruses - 0; Other Eukaryotes - 202 (source: NCBI BLink). & (gnl|cdd|29599 : 212.0) no description available & (gnl|cdd|36909 : 205.0) no description available & (q08066|rl19_maize : 84.7) 60S ribosomal protein L19 (Fragment) - Zea mays (Maize) & (reliability: 428.0) & (original description: Putative rpl19, Description = Ribosomal protein L19, PFAM = PF01280)' T '29.2.1.2.2.19' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L19' 'niben044scf00020925ctg011_1-3501' '(at3g16780 : 215.0) Ribosomal protein L19e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19/L19e (InterPro:IPR000196), Ribosomal protein L19/L19e, domain 3 (InterPro:IPR015974), Ribosomal protein L19/L19e, domain 1 (InterPro:IPR015972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19e family protein (TAIR:AT4G02230.1); Has 1139 Blast hits to 1139 proteins in 410 species: Archae - 291; Bacteria - 0; Metazoa - 317; Fungi - 171; Plants - 158; Viruses - 0; Other Eukaryotes - 202 (source: NCBI BLink). & (gnl|cdd|29599 : 214.0) no description available & (gnl|cdd|36909 : 207.0) no description available & (q08066|rl19_maize : 86.3) 60S ribosomal protein L19 (Fragment) - Zea mays (Maize) & (reliability: 430.0) & (original description: Putative RPL19B, Description = 60S ribosomal protein L19-2, PFAM = PF01280)' T '29.2.1.2.2.19' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L19' 'niben101scf01623_251279-255165' '(at3g16780 : 215.0) Ribosomal protein L19e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19/L19e (InterPro:IPR000196), Ribosomal protein L19/L19e, domain 3 (InterPro:IPR015974), Ribosomal protein L19/L19e, domain 1 (InterPro:IPR015972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19e family protein (TAIR:AT4G02230.1); Has 1139 Blast hits to 1139 proteins in 410 species: Archae - 291; Bacteria - 0; Metazoa - 317; Fungi - 171; Plants - 158; Viruses - 0; Other Eukaryotes - 202 (source: NCBI BLink). & (gnl|cdd|29599 : 212.0) no description available & (gnl|cdd|36909 : 205.0) no description available & (q08066|rl19_maize : 86.3) 60S ribosomal protein L19 (Fragment) - Zea mays (Maize) & (reliability: 430.0) & (original description: Putative RPL19B, Description = 60S ribosomal protein L19-2, PFAM = PF01280)' T '29.2.1.2.2.19' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L19' 'niben101scf03706_231834-236369' '(gnl|cdd|29599 : 214.0) no description available & (at3g16780 : 211.0) Ribosomal protein L19e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19/L19e (InterPro:IPR000196), Ribosomal protein L19/L19e, domain 3 (InterPro:IPR015974), Ribosomal protein L19/L19e, domain 1 (InterPro:IPR015972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19e family protein (TAIR:AT4G02230.1); Has 1139 Blast hits to 1139 proteins in 410 species: Archae - 291; Bacteria - 0; Metazoa - 317; Fungi - 171; Plants - 158; Viruses - 0; Other Eukaryotes - 202 (source: NCBI BLink). & (gnl|cdd|36909 : 207.0) no description available & (q08066|rl19_maize : 85.5) 60S ribosomal protein L19 (Fragment) - Zea mays (Maize) & (reliability: 422.0) & (original description: Putative RPL19B, Description = 60S ribosomal protein L19-2, PFAM = PF01280)' T '29.2.1.2.2.19' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L19' 'niben101scf10857_104867-107472' '(at3g16780 : 211.0) Ribosomal protein L19e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19/L19e (InterPro:IPR000196), Ribosomal protein L19/L19e, domain 3 (InterPro:IPR015974), Ribosomal protein L19/L19e, domain 1 (InterPro:IPR015972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19e family protein (TAIR:AT4G02230.1); Has 1139 Blast hits to 1139 proteins in 410 species: Archae - 291; Bacteria - 0; Metazoa - 317; Fungi - 171; Plants - 158; Viruses - 0; Other Eukaryotes - 202 (source: NCBI BLink). & (gnl|cdd|29599 : 196.0) no description available & (gnl|cdd|36909 : 192.0) no description available & (reliability: 422.0) & (original description: Putative RPL19B, Description = 60S ribosomal protein L19-2, PFAM = PF01280)' T '29.2.1.2.2.21' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L21' 'nbv0.5scaffold5589_15575-18967' '(at1g57860 : 271.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: juvenile leaf; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L21e (InterPro:IPR001147), Ribosomal protein L21e, conserved site (InterPro:IPR018259); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT1G57660.1); Has 1436 Blast hits to 1436 proteins in 381 species: Archae - 214; Bacteria - 0; Metazoa - 706; Fungi - 179; Plants - 136; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (gnl|cdd|36943 : 170.0) no description available & (gnl|cdd|64990 : 120.0) no description available & (reliability: 542.0) & (original description: Putative RPL21, Description = 60S ribosomal protein L21, PFAM = PF01157)' T '29.2.1.2.2.21' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L21' 'niben101scf00015_178114-184250' '(at1g57860 : 270.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: juvenile leaf; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L21e (InterPro:IPR001147), Ribosomal protein L21e, conserved site (InterPro:IPR018259); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT1G57660.1); Has 1436 Blast hits to 1436 proteins in 381 species: Archae - 214; Bacteria - 0; Metazoa - 706; Fungi - 179; Plants - 136; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (gnl|cdd|36943 : 174.0) no description available & (gnl|cdd|64990 : 121.0) no description available & (reliability: 540.0) & (original description: Putative RPL21A, Description = 60S ribosomal protein L21-1, PFAM = PF01157)' T '29.2.1.2.2.21' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L21' 'niben101scf03293_163706-167038' '(at1g09690 : 270.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: juvenile leaf, pollen tube; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L21e (InterPro:IPR001147), Ribosomal protein L21e, conserved site (InterPro:IPR018259); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT1G09590.1); Has 1439 Blast hits to 1439 proteins in 381 species: Archae - 214; Bacteria - 0; Metazoa - 709; Fungi - 179; Plants - 136; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (gnl|cdd|36943 : 175.0) no description available & (gnl|cdd|64990 : 121.0) no description available & (reliability: 540.0) & (original description: Putative RPL21A, Description = 60S ribosomal protein L21-1, PFAM = PF01157)' T '29.2.1.2.2.21' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L21' 'niben101scf13002_326374-329870' '(at1g57860 : 271.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: juvenile leaf; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L21e (InterPro:IPR001147), Ribosomal protein L21e, conserved site (InterPro:IPR018259); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT1G57660.1); Has 1436 Blast hits to 1436 proteins in 381 species: Archae - 214; Bacteria - 0; Metazoa - 706; Fungi - 179; Plants - 136; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (gnl|cdd|36943 : 172.0) no description available & (gnl|cdd|64990 : 120.0) no description available & (reliability: 542.0) & (original description: Putative RPL21A, Description = 60S ribosomal protein L21-1, PFAM = PF01157)' T '29.2.1.2.2.22' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L22' 'niben044scf00007750ctg001_2053-9269' '(at3g05560 : 149.0) Ribosomal L22e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22e (InterPro:IPR002671); BEST Arabidopsis thaliana protein match is: Ribosomal L22e protein family (TAIR:AT5G27770.1); Has 686 Blast hits to 686 proteins in 236 species: Archae - 0; Bacteria - 0; Metazoa - 333; Fungi - 136; Plants - 114; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|38644 : 145.0) no description available & (gnl|cdd|85669 : 134.0) no description available & (reliability: 298.0) & (original description: Putative RPL22B, Description = 60S ribosomal protein L22-2, PFAM = PF01776)' T '29.2.1.2.2.22' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L22' 'niben101scf00369_1219500-1223234' '(gnl|cdd|38644 : 148.0) no description available & (at3g05560 : 146.0) Ribosomal L22e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22e (InterPro:IPR002671); BEST Arabidopsis thaliana protein match is: Ribosomal L22e protein family (TAIR:AT5G27770.1); Has 686 Blast hits to 686 proteins in 236 species: Archae - 0; Bacteria - 0; Metazoa - 333; Fungi - 136; Plants - 114; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|85669 : 138.0) no description available & (reliability: 292.0) & (original description: Putative RPL22B, Description = 60S ribosomal protein L22-2, PFAM = PF01776)' T '29.2.1.2.2.22' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L22' 'niben101scf01115_220183-224352' '(gnl|cdd|38644 : 142.0) no description available & (at3g05560 : 141.0) Ribosomal L22e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22e (InterPro:IPR002671); BEST Arabidopsis thaliana protein match is: Ribosomal L22e protein family (TAIR:AT5G27770.1); Has 686 Blast hits to 686 proteins in 236 species: Archae - 0; Bacteria - 0; Metazoa - 333; Fungi - 136; Plants - 114; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|85669 : 125.0) no description available & (reliability: 282.0) & (original description: Putative RPL22B, Description = 60S ribosomal protein L22-2, PFAM = PF01776)' T '29.2.1.2.2.22' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L22' 'niben101scf04300_304970-310662' '(at3g05560 : 149.0) Ribosomal L22e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22e (InterPro:IPR002671); BEST Arabidopsis thaliana protein match is: Ribosomal L22e protein family (TAIR:AT5G27770.1); Has 686 Blast hits to 686 proteins in 236 species: Archae - 0; Bacteria - 0; Metazoa - 333; Fungi - 136; Plants - 114; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|38644 : 146.0) no description available & (gnl|cdd|85669 : 135.0) no description available & (reliability: 298.0) & (original description: Putative RPL22B, Description = 60S ribosomal protein L22-2, PFAM = PF01776)' T '29.2.1.2.2.22' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L22' 'niben101scf05435_114632-118268' '(gnl|cdd|38644 : 148.0) no description available & (at3g05560 : 147.0) Ribosomal L22e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22e (InterPro:IPR002671); BEST Arabidopsis thaliana protein match is: Ribosomal L22e protein family (TAIR:AT5G27770.1); Has 686 Blast hits to 686 proteins in 236 species: Archae - 0; Bacteria - 0; Metazoa - 333; Fungi - 136; Plants - 114; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|85669 : 137.0) no description available & (reliability: 294.0) & (original description: Putative rpl22, Description = 60S ribosomal protein L22, PFAM = PF01776)' T '29.2.1.2.2.23' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23' 'nbv0.5scaffold848_478660-554485' '(q07760|rl23_tobac : 179.0) 60S ribosomal protein L23 - Nicotiana tabacum (Common tobacco) & (at3g04400 : 177.0) embryo defective 2171 (emb2171); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14b/L23e (InterPro:IPR000218), Ribosomal protein L14 conserved site (InterPro:IPR019972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14p/L23e family protein (TAIR:AT2G33370.1). & (gnl|cdd|36119 : 129.0) no description available & (gnl|cdd|82686 : 108.0) no description available & (reliability: 354.0) & (original description: Putative rpl17, Description = 60S ribosomal protein L23, PFAM = PF00238)' T '29.2.1.2.2.23' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23' 'niben101scf00849_177702-182033' '(at3g04400 : 255.0) embryo defective 2171 (emb2171); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14b/L23e (InterPro:IPR000218), Ribosomal protein L14 conserved site (InterPro:IPR019972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14p/L23e family protein (TAIR:AT2G33370.1). & (q07760|rl23_tobac : 254.0) 60S ribosomal protein L23 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36119 : 190.0) no description available & (gnl|cdd|82686 : 163.0) no description available & (reliability: 510.0) & (original description: Putative RPL23A, Description = 60S ribosomal protein L23, PFAM = PF00238)' T '29.2.1.2.2.23' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23' 'niben101scf03365_396666-400164' '(at3g04400 : 256.0) embryo defective 2171 (emb2171); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14b/L23e (InterPro:IPR000218), Ribosomal protein L14 conserved site (InterPro:IPR019972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14p/L23e family protein (TAIR:AT2G33370.1). & (q07760|rl23_tobac : 253.0) 60S ribosomal protein L23 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36119 : 189.0) no description available & (gnl|cdd|82686 : 163.0) no description available & (reliability: 512.0) & (original description: Putative RPL23A, Description = 60S ribosomal protein L23, PFAM = PF00238)' T '29.2.1.2.2.24' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L24' 'niben101scf00111_168909-174229' '(o65743|rl24_cicar : 182.0) 60S ribosomal protein L24 - Cicer arietinum (Chickpea) (Garbanzo) & (at2g36620 : 178.0) RPL24A encodes ribosomal protein L24, homolog of cytosolic RPL24, found in archaea and higher eukaryotes. Arabidopsis has two RPL24 homologs, RPL24A (AT2G36620) and RPL24B (AT3G53020).; ribosomal protein L24 (RPL24A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L24e (InterPro:IPR000988); BEST Arabidopsis thaliana protein match is: Ribosomal protein L24e family protein (TAIR:AT3G53020.1); Has 1480 Blast hits to 1465 proteins in 352 species: Archae - 106; Bacteria - 37; Metazoa - 463; Fungi - 306; Plants - 338; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|36933 : 139.0) no description available & (gnl|cdd|85333 : 100.0) no description available & (reliability: 356.0) & (original description: Putative RPL24, Description = 60S ribosomal protein L24, PFAM = PF01246)' T '29.2.1.2.2.24' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L24' 'niben101scf02475_1061113-1065245' '(at2g44860 : 190.0) Ribosomal protein L24e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L24e (InterPro:IPR000988), TRASH (InterPro:IPR011017); BEST Arabidopsis thaliana protein match is: Ribosomal protein L24e family protein (TAIR:AT3G53020.1); Has 1527 Blast hits to 1527 proteins in 399 species: Archae - 307; Bacteria - 5; Metazoa - 446; Fungi - 310; Plants - 198; Viruses - 0; Other Eukaryotes - 261 (source: NCBI BLink). & (gnl|cdd|36934 : 136.0) no description available & (gnl|cdd|32258 : 91.9) no description available & (reliability: 380.0) & (original description: Putative rlp24, Description = Ribosome biogenesis protein RLP24, PFAM = PF01246)' T '29.2.1.2.2.24' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L24' 'niben101scf02502_1563589-1567474' '(o65743|rl24_cicar : 176.0) 60S ribosomal protein L24 - Cicer arietinum (Chickpea) (Garbanzo) & (at2g36620 : 171.0) RPL24A encodes ribosomal protein L24, homolog of cytosolic RPL24, found in archaea and higher eukaryotes. Arabidopsis has two RPL24 homologs, RPL24A (AT2G36620) and RPL24B (AT3G53020).; ribosomal protein L24 (RPL24A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L24e (InterPro:IPR000988); BEST Arabidopsis thaliana protein match is: Ribosomal protein L24e family protein (TAIR:AT3G53020.1); Has 1480 Blast hits to 1465 proteins in 352 species: Archae - 106; Bacteria - 37; Metazoa - 463; Fungi - 306; Plants - 338; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|36933 : 140.0) no description available & (gnl|cdd|85333 : 100.0) no description available & (reliability: 342.0) & (original description: Putative rpL24e, Description = Ribosomal protein L24e, PFAM = PF01246)' T '29.2.1.2.2.24' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L24' 'niben101scf09564_46795-51439' '(o65743|rl24_cicar : 187.0) 60S ribosomal protein L24 - Cicer arietinum (Chickpea) (Garbanzo) & (at2g36620 : 181.0) RPL24A encodes ribosomal protein L24, homolog of cytosolic RPL24, found in archaea and higher eukaryotes. Arabidopsis has two RPL24 homologs, RPL24A (AT2G36620) and RPL24B (AT3G53020).; ribosomal protein L24 (RPL24A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L24e (InterPro:IPR000988); BEST Arabidopsis thaliana protein match is: Ribosomal protein L24e family protein (TAIR:AT3G53020.1); Has 1480 Blast hits to 1465 proteins in 352 species: Archae - 106; Bacteria - 37; Metazoa - 463; Fungi - 306; Plants - 338; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|36933 : 141.0) no description available & (gnl|cdd|85333 : 100.0) no description available & (reliability: 362.0) & (original description: Putative RPL24, Description = 60S ribosomal protein L24, PFAM = PF01246)' T '29.2.1.2.2.25' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L25' '' '' '29.2.1.2.2.26' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L26' 'niben101scf00853_704241-706678' '(gnl|cdd|38611 : 172.0) no description available & (at3g49910 : 153.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to cold, translation; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L26, eukaryotic/archaeal (InterPro:IPR005756), Ribosomal protein L24, SH3-like (InterPro:IPR014723), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT5G67510.1); Has 1113 Blast hits to 1113 proteins in 414 species: Archae - 314; Bacteria - 5; Metazoa - 375; Fungi - 141; Plants - 96; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (q39411|rl26_brara : 136.0) 60S ribosomal protein L26 - Brassica rapa (Turnip) & (gnl|cdd|80834 : 106.0) no description available & (reliability: 306.0) & (original description: Putative RL26, Description = RL26, ribosomal protein 26 60S large ribosomal subunit, PFAM = PF00467;PF16906)' T '29.2.1.2.2.26' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L26' 'niben101scf00991_538046-540483' '(gnl|cdd|38611 : 175.0) no description available & (at3g49910 : 159.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to cold, translation; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L26, eukaryotic/archaeal (InterPro:IPR005756), Ribosomal protein L24, SH3-like (InterPro:IPR014723), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT5G67510.1); Has 1113 Blast hits to 1113 proteins in 414 species: Archae - 314; Bacteria - 5; Metazoa - 375; Fungi - 141; Plants - 96; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (q39411|rl26_brara : 141.0) 60S ribosomal protein L26 - Brassica rapa (Turnip) & (gnl|cdd|80834 : 109.0) no description available & (reliability: 318.0) & (original description: Putative RPL26A, Description = 60S ribosomal protein L26-1, PFAM = PF00467;PF16906)' T '29.2.1.2.2.26' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L26' 'niben101scf02282_57567-60004' '(gnl|cdd|38611 : 175.0) no description available & (at3g49910 : 160.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to cold, translation; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L26, eukaryotic/archaeal (InterPro:IPR005756), Ribosomal protein L24, SH3-like (InterPro:IPR014723), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT5G67510.1); Has 1113 Blast hits to 1113 proteins in 414 species: Archae - 314; Bacteria - 5; Metazoa - 375; Fungi - 141; Plants - 96; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (q39411|rl26_brara : 143.0) 60S ribosomal protein L26 - Brassica rapa (Turnip) & (gnl|cdd|80834 : 107.0) no description available & (reliability: 320.0) & (original description: Putative RPL26A, Description = 60S ribosomal protein L26-1, PFAM = PF16906;PF00467)' T '29.2.1.2.2.26' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L26' 'niben101scf03747_466658-469095' '(gnl|cdd|38611 : 174.0) no description available & (at3g49910 : 173.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to cold, translation; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L26, eukaryotic/archaeal (InterPro:IPR005756), Ribosomal protein L24, SH3-like (InterPro:IPR014723), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT5G67510.1); Has 1113 Blast hits to 1113 proteins in 414 species: Archae - 314; Bacteria - 5; Metazoa - 375; Fungi - 141; Plants - 96; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (q39411|rl26_brara : 154.0) 60S ribosomal protein L26 - Brassica rapa (Turnip) & (gnl|cdd|80834 : 107.0) no description available & (reliability: 346.0) & (original description: Putative RPL26A, Description = 60S ribosomal protein L26-1, PFAM = PF00467;PF16906)' T '29.2.1.2.2.26' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L26' 'niben101scf04627_235580-255581' '(at3g49910 : 134.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to cold, translation; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L26, eukaryotic/archaeal (InterPro:IPR005756), Ribosomal protein L24, SH3-like (InterPro:IPR014723), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT5G67510.1); Has 1113 Blast hits to 1113 proteins in 414 species: Archae - 314; Bacteria - 5; Metazoa - 375; Fungi - 141; Plants - 96; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (q39411|rl26_brara : 123.0) 60S ribosomal protein L26 - Brassica rapa (Turnip) & (gnl|cdd|38611 : 120.0) no description available & (gnl|cdd|80834 : 90.7) no description available & (reliability: 268.0) & (original description: Putative RL26, Description = 60S ribosomal protein L26, PFAM = PF00467;PF16906)' T '29.2.1.2.2.27' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L27' 'nbv0.5scaffold3282_135341-137691' '(p41101|rl27_soltu : 142.0) 60S ribosomal protein L27 - Solanum tuberosum (Potato) & (at4g15000 : 132.0) Ribosomal L27e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L27e (InterPro:IPR001141); BEST Arabidopsis thaliana protein match is: Ribosomal L27e protein family (TAIR:AT3G22230.1); Has 763 Blast hits to 763 proteins in 288 species: Archae - 0; Bacteria - 0; Metazoa - 339; Fungi - 144; Plants - 139; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|38628 : 125.0) no description available & (reliability: 264.0) & (original description: Putative RL17, Description = 60S ribosomal protein L27, PFAM = PF01777)' T '29.2.1.2.2.27' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L27' 'niben101ctg14963_807-3211' '(p41101|rl27_soltu : 164.0) 60S ribosomal protein L27 - Solanum tuberosum (Potato) & (gnl|cdd|38628 : 161.0) no description available & (at4g15000 : 160.0) Ribosomal L27e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L27e (InterPro:IPR001141); BEST Arabidopsis thaliana protein match is: Ribosomal L27e protein family (TAIR:AT3G22230.1); Has 763 Blast hits to 763 proteins in 288 species: Archae - 0; Bacteria - 0; Metazoa - 339; Fungi - 144; Plants - 139; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|85670 : 109.0) no description available & (reliability: 320.0) & (original description: Putative RPL27, Description = 60S ribosomal protein L27, PFAM = PF01777)' T '29.2.1.2.2.27' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L27' 'niben101scf02476_555786-558190' '(at4g15000 : 174.0) Ribosomal L27e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L27e (InterPro:IPR001141); BEST Arabidopsis thaliana protein match is: Ribosomal L27e protein family (TAIR:AT3G22230.1); Has 763 Blast hits to 763 proteins in 288 species: Archae - 0; Bacteria - 0; Metazoa - 339; Fungi - 144; Plants - 139; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (q05462|rl27_pea : 171.0) 60S ribosomal protein L27 - Pisum sativum (Garden pea) & (gnl|cdd|38628 : 157.0) no description available & (gnl|cdd|85670 : 104.0) no description available & (reliability: 348.0) & (original description: Putative RPL27B, Description = 60S ribosomal protein L27-2, PFAM = PF01777)' T '29.2.1.2.2.27' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L27' 'niben101scf03015_621556-635179' '(p41101|rl27_soltu : 158.0) 60S ribosomal protein L27 - Solanum tuberosum (Potato) & (at4g15000 : 147.0) Ribosomal L27e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L27e (InterPro:IPR001141); BEST Arabidopsis thaliana protein match is: Ribosomal L27e protein family (TAIR:AT3G22230.1); Has 763 Blast hits to 763 proteins in 288 species: Archae - 0; Bacteria - 0; Metazoa - 339; Fungi - 144; Plants - 139; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|38628 : 136.0) no description available & (reliability: 294.0) & (original description: Putative rpl27, Description = 60S ribosomal protein L27, PFAM = PF01777)' T '29.2.1.2.2.28' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L28' 'niben101scf00206_78125-81905' '(at4g29410 : 176.0) Ribosomal L28e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L28e (InterPro:IPR002672); BEST Arabidopsis thaliana protein match is: Ribosomal L28e protein family (TAIR:AT2G19730.3); Has 531 Blast hits to 531 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 284; Fungi - 94; Plants - 107; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|38622 : 116.0) no description available & (gnl|cdd|85671 : 113.0) no description available & (reliability: 352.0) & (original description: Putative RPL28A, Description = 60S ribosomal protein L28-1, PFAM = PF01778)' T '29.2.1.2.2.28' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L28' 'niben101scf02477_81679-85953' '(at4g29410 : 180.0) Ribosomal L28e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L28e (InterPro:IPR002672); BEST Arabidopsis thaliana protein match is: Ribosomal L28e protein family (TAIR:AT2G19730.3); Has 531 Blast hits to 531 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 284; Fungi - 94; Plants - 107; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|38622 : 116.0) no description available & (gnl|cdd|85671 : 114.0) no description available & (reliability: 360.0) & (original description: Putative RPL28A, Description = 60S ribosomal protein L28-1, PFAM = PF01778)' T '29.2.1.2.2.28' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L28' 'niben101scf05923_307164-327085' '(at2g19730 : 144.0) Ribosomal L28e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, chloroplast, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L28e (InterPro:IPR002672); BEST Arabidopsis thaliana protein match is: Ribosomal L28e protein family (TAIR:AT4G29410.2); Has 531 Blast hits to 531 proteins in 211 species: Archae - 0; Bacteria - 0; Metazoa - 280; Fungi - 94; Plants - 107; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|85671 : 93.2) no description available & (gnl|cdd|38622 : 91.6) no description available & (reliability: 288.0) & (original description: Putative RPL28A, Description = 60S ribosomal protein L28-1, PFAM = PF01778)' T '29.2.1.2.2.29' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L29' '' '' '29.2.1.2.2.30' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L30' 'nbv0.3scaffold57229_616-3320' '(at1g22110 : 82.8) structural constituent of ribosome; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410), Ribosomal protein L30e (InterPro:IPR000231); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) (TAIR:AT1G77932.1); Has 4674 Blast hits to 1855 proteins in 271 species: Archae - 11; Bacteria - 643; Metazoa - 1218; Fungi - 438; Plants - 374; Viruses - 105; Other Eukaryotes - 1885 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative , Description = , PFAM = PF11250)' T '29.2.1.2.2.30' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L30' 'niben044scf00046629ctg003_284-3748' '(o49884|rl30_luplu : 196.0) 60S ribosomal protein L30 - Lupinus luteus (European yellow lupin) & (at1g77940 : 191.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L30e (InterPro:IPR000231); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT1G36240.1); Has 1074 Blast hits to 1073 proteins in 382 species: Archae - 212; Bacteria - 1; Metazoa - 396; Fungi - 147; Plants - 146; Viruses - 0; Other Eukaryotes - 172 (source: NCBI BLink). & (gnl|cdd|38199 : 157.0) no description available & (gnl|cdd|32095 : 128.0) no description available & (reliability: 382.0) & (original description: Putative RPL30, Description = 60S ribosomal protein L30, PFAM = PF01248)' T '29.2.1.2.2.30' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L30' 'niben101scf00833_83857-87114' '(o49884|rl30_luplu : 197.0) 60S ribosomal protein L30 - Lupinus luteus (European yellow lupin) & (at1g77940 : 193.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L30e (InterPro:IPR000231); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT1G36240.1); Has 1074 Blast hits to 1073 proteins in 382 species: Archae - 212; Bacteria - 1; Metazoa - 396; Fungi - 147; Plants - 146; Viruses - 0; Other Eukaryotes - 172 (source: NCBI BLink). & (gnl|cdd|38199 : 159.0) no description available & (gnl|cdd|32095 : 128.0) no description available & (reliability: 386.0) & (original description: Putative rpl30, Description = 60S ribosomal protein L30, PFAM = PF01248)' T '29.2.1.2.2.30' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L30' 'niben101scf01383_144354-148547' '(o49884|rl30_luplu : 206.0) 60S ribosomal protein L30 - Lupinus luteus (European yellow lupin) & (at1g36240 : 194.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L30e (InterPro:IPR000231); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT1G77940.1); Has 1076 Blast hits to 1075 proteins in 382 species: Archae - 212; Bacteria - 1; Metazoa - 396; Fungi - 147; Plants - 146; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (gnl|cdd|38199 : 168.0) no description available & (gnl|cdd|32095 : 130.0) no description available & (reliability: 388.0) & (original description: Putative RPL30, Description = 60S ribosomal protein L30, PFAM = PF01248)' T '29.2.1.2.2.30' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L30' 'niben101scf02636_10054-12758' '(at1g22110 : 82.4) structural constituent of ribosome; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410), Ribosomal protein L30e (InterPro:IPR000231); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) (TAIR:AT1G77932.1); Has 4674 Blast hits to 1855 proteins in 271 species: Archae - 11; Bacteria - 643; Metazoa - 1218; Fungi - 438; Plants - 374; Viruses - 105; Other Eukaryotes - 1885 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative , Description = DUF3049 family protein, PFAM = PF11250)' T '29.2.1.2.2.30' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L30' 'niben101scf04558_138733-143753' '(o49884|rl30_luplu : 209.0) 60S ribosomal protein L30 - Lupinus luteus (European yellow lupin) & (at1g36240 : 196.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L30e (InterPro:IPR000231); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT1G77940.1); Has 1076 Blast hits to 1075 proteins in 382 species: Archae - 212; Bacteria - 1; Metazoa - 396; Fungi - 147; Plants - 146; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (gnl|cdd|38199 : 169.0) no description available & (gnl|cdd|32095 : 128.0) no description available & (reliability: 392.0) & (original description: Putative RPL30, Description = 60S ribosomal protein L30, PFAM = PF01248)' T '29.2.1.2.2.30' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L30' 'niben101scf05588_1219471-1223553' '(o49884|rl30_luplu : 210.0) 60S ribosomal protein L30 - Lupinus luteus (European yellow lupin) & (at1g36240 : 198.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L30e (InterPro:IPR000231); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT1G77940.1); Has 1076 Blast hits to 1075 proteins in 382 species: Archae - 212; Bacteria - 1; Metazoa - 396; Fungi - 147; Plants - 146; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (gnl|cdd|38199 : 168.0) no description available & (gnl|cdd|32095 : 131.0) no description available & (reliability: 396.0) & (original description: Putative RPL30, Description = 60S ribosomal protein L30, PFAM = PF01248)' T '29.2.1.2.2.31' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L31' 'niben044scf00012901ctg009_30771-34339' '(q9mav7|rl31_pangi : 151.0) 60S ribosomal protein L31 - Panax ginseng (Korean ginseng) & (at2g19740 : 148.0) Ribosomal protein L31e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, chloroplast, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L31e (InterPro:IPR000054), Ribosomal protein L31e, conserved site (InterPro:IPR020052); BEST Arabidopsis thaliana protein match is: Ribosomal protein L31e family protein (TAIR:AT5G56710.1); Has 1076 Blast hits to 1076 proteins in 345 species: Archae - 133; Bacteria - 2; Metazoa - 458; Fungi - 144; Plants - 170; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (gnl|cdd|85299 : 123.0) no description available & (gnl|cdd|36111 : 117.0) no description available & (reliability: 296.0) & (original description: Putative RPL31, Description = 60S ribosomal protein L31, PFAM = PF01198)' T '29.2.1.2.2.31' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L31' 'niben101scf00422_118790-122484' '(q9mav7|rl31_pangi : 152.0) 60S ribosomal protein L31 - Panax ginseng (Korean ginseng) & (at2g19740 : 151.0) Ribosomal protein L31e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, chloroplast, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L31e (InterPro:IPR000054), Ribosomal protein L31e, conserved site (InterPro:IPR020052); BEST Arabidopsis thaliana protein match is: Ribosomal protein L31e family protein (TAIR:AT5G56710.1); Has 1076 Blast hits to 1076 proteins in 345 species: Archae - 133; Bacteria - 2; Metazoa - 458; Fungi - 144; Plants - 170; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (gnl|cdd|85299 : 122.0) no description available & (gnl|cdd|36111 : 115.0) no description available & (reliability: 302.0) & (original description: Putative RPL31, Description = 60S ribosomal protein L31, PFAM = PF01198)' T '29.2.1.2.2.31' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L31' 'niben101scf03307_962359-965613' '(at2g19740 : 151.0) Ribosomal protein L31e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, chloroplast, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L31e (InterPro:IPR000054), Ribosomal protein L31e, conserved site (InterPro:IPR020052); BEST Arabidopsis thaliana protein match is: Ribosomal protein L31e family protein (TAIR:AT5G56710.1); Has 1076 Blast hits to 1076 proteins in 345 species: Archae - 133; Bacteria - 2; Metazoa - 458; Fungi - 144; Plants - 170; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (q9mav7|rl31_pangi : 150.0) 60S ribosomal protein L31 - Panax ginseng (Korean ginseng) & (gnl|cdd|85299 : 123.0) no description available & (gnl|cdd|36111 : 116.0) no description available & (reliability: 302.0) & (original description: Putative RPL31, Description = 60S ribosomal protein L31, PFAM = PF01198)' T '29.2.1.2.2.32' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L32' 'niben044scf00004240ctg000_1-5398' '(at4g18100 : 199.0) Ribosomal protein L32e; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, nucleolus; EXPRESSED IN: callus, pollen tube, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L32e (InterPro:IPR001515), Ribosomal protein L32e, conserved site (InterPro:IPR018263); BEST Arabidopsis thaliana protein match is: Ribosomal protein L32e (TAIR:AT5G46430.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36096 : 173.0) no description available & (gnl|cdd|85596 : 133.0) no description available & (reliability: 398.0) & (original description: Putative RPL32A, Description = 60S ribosomal protein L32-1, PFAM = PF01655)' T '29.2.1.2.2.32' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L32' 'niben101scf01061_1505-4970' '(at4g18100 : 211.0) Ribosomal protein L32e; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, nucleolus; EXPRESSED IN: callus, pollen tube, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L32e (InterPro:IPR001515), Ribosomal protein L32e, conserved site (InterPro:IPR018263); BEST Arabidopsis thaliana protein match is: Ribosomal protein L32e (TAIR:AT5G46430.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36096 : 174.0) no description available & (gnl|cdd|85596 : 128.0) no description available & (reliability: 422.0) & (original description: Putative rp49, Description = Ribosomal protein 49, PFAM = PF01655)' T '29.2.1.2.2.32' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L32' 'niben101scf01281_1153388-1162529' '(at4g18100 : 206.0) Ribosomal protein L32e; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, nucleolus; EXPRESSED IN: callus, pollen tube, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L32e (InterPro:IPR001515), Ribosomal protein L32e, conserved site (InterPro:IPR018263); BEST Arabidopsis thaliana protein match is: Ribosomal protein L32e (TAIR:AT5G46430.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36096 : 171.0) no description available & (gnl|cdd|85596 : 128.0) no description available & (reliability: 412.0) & (original description: Putative rp49, Description = 60S ribosomal protein L32, PFAM = PF01655)' T '29.2.1.2.2.32' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L32' 'niben101scf01797_114419-118485' '(at4g18100 : 198.0) Ribosomal protein L32e; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, nucleolus; EXPRESSED IN: callus, pollen tube, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L32e (InterPro:IPR001515), Ribosomal protein L32e, conserved site (InterPro:IPR018263); BEST Arabidopsis thaliana protein match is: Ribosomal protein L32e (TAIR:AT5G46430.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36096 : 171.0) no description available & (gnl|cdd|85596 : 129.0) no description available & (reliability: 396.0) & (original description: Putative RPL32A, Description = 60S ribosomal protein L32-1, PFAM = PF01655)' T '29.2.1.2.2.32' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L32' 'niben101scf04233_43598-49044' '(at4g18100 : 199.0) Ribosomal protein L32e; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, nucleolus; EXPRESSED IN: callus, pollen tube, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L32e (InterPro:IPR001515), Ribosomal protein L32e, conserved site (InterPro:IPR018263); BEST Arabidopsis thaliana protein match is: Ribosomal protein L32e (TAIR:AT5G46430.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36096 : 170.0) no description available & (gnl|cdd|85596 : 130.0) no description available & (reliability: 398.0) & (original description: Putative RPL32A, Description = 60S ribosomal protein L32-1, PFAM = PF01655)' T '29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'nbv0.3scaffold5327_15730-21604' '(at5g15260 : 81.3) Ribosomal protein L34e superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195); BEST Arabidopsis thaliana protein match is: Ribosomal protein L34e superfamily protein (TAIR:AT3G01170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative At5g15260, Description = Ribosomal protein L34e superfamily protein, PFAM = )' T '29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'nbv0.3scaffold51316_7897-14136' '(at1g73850 : 336.0) FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: endomembrane system, ribosome, intracellular; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195), Protein of unknown function DUF1666 (InterPro:IPR012870); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1666) (TAIR:AT3G20260.1); Has 1252 Blast hits to 1091 proteins in 184 species: Archae - 4; Bacteria - 49; Metazoa - 367; Fungi - 151; Plants - 117; Viruses - 41; Other Eukaryotes - 523 (source: NCBI BLink). & (gnl|cdd|87396 : 288.0) no description available & (reliability: 672.0) & (original description: Putative PGSC0003DMG400020985, Description = DUF1666 family protein, PFAM = PF07891)' T '29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'nbv0.3scaffold78481_1848-7443' '(at5g39785 : 357.0) FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195), Protein of unknown function DUF1666 (InterPro:IPR012870); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1666) (TAIR:AT1G69610.1); Has 458 Blast hits to 427 proteins in 93 species: Archae - 0; Bacteria - 15; Metazoa - 64; Fungi - 53; Plants - 93; Viruses - 4; Other Eukaryotes - 229 (source: NCBI BLink). & (gnl|cdd|87396 : 272.0) no description available & (reliability: 714.0) & (original description: Putative PGSC0003DMG400001422, Description = Putative ovule protein, PFAM = PF07891)' T '29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben044scf00000088ctg008_1-5483' '(at3g20260 : 354.0) FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195), Protein of unknown function DUF1666 (InterPro:IPR012870); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1666) (TAIR:AT1G73850.1); Has 288 Blast hits to 284 proteins in 72 species: Archae - 0; Bacteria - 2; Metazoa - 64; Fungi - 36; Plants - 99; Viruses - 14; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|87396 : 270.0) no description available & (reliability: 708.0) & (original description: Putative At3g20260, Description = Putative uncharacterized protein At3g20260, PFAM = PF07891)' T '29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben044scf00008560ctg009_327-7060' '(gnl|cdd|87396 : 171.0) no description available & (at5g39785 : 140.0) FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195), Protein of unknown function DUF1666 (InterPro:IPR012870); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1666) (TAIR:AT1G69610.1); Has 458 Blast hits to 427 proteins in 93 species: Archae - 0; Bacteria - 15; Metazoa - 64; Fungi - 53; Plants - 93; Viruses - 4; Other Eukaryotes - 229 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative BnaCnng29140D, Description = BnaCnng29140D protein, PFAM = PF07891)' T '29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben044scf00008824ctg003_28-5304' '(at5g39785 : 327.0) FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195), Protein of unknown function DUF1666 (InterPro:IPR012870); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1666) (TAIR:AT1G69610.1); Has 458 Blast hits to 427 proteins in 93 species: Archae - 0; Bacteria - 15; Metazoa - 64; Fungi - 53; Plants - 93; Viruses - 4; Other Eukaryotes - 229 (source: NCBI BLink). & (gnl|cdd|87396 : 272.0) no description available & (reliability: 654.0) & (original description: Putative PGSC0003DMG400001422, Description = Putative ovule protein, PFAM = PF07891)' T '29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben044scf00015237ctg012_5648-10540' '(at1g73850 : 345.0) FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: endomembrane system, ribosome, intracellular; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195), Protein of unknown function DUF1666 (InterPro:IPR012870); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1666) (TAIR:AT3G20260.1); Has 1252 Blast hits to 1091 proteins in 184 species: Archae - 4; Bacteria - 49; Metazoa - 367; Fungi - 151; Plants - 117; Viruses - 41; Other Eukaryotes - 523 (source: NCBI BLink). & (gnl|cdd|87396 : 289.0) no description available & (reliability: 690.0) & (original description: Putative PGSC0003DMG400020985, Description = DUF1666 family protein, PFAM = PF07891)' T '29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben044scf00024463ctg001_1165-8573' '(gnl|cdd|87396 : 300.0) no description available & (at5g39785 : 268.0) FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195), Protein of unknown function DUF1666 (InterPro:IPR012870); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1666) (TAIR:AT1G69610.1); Has 458 Blast hits to 427 proteins in 93 species: Archae - 0; Bacteria - 15; Metazoa - 64; Fungi - 53; Plants - 93; Viruses - 4; Other Eukaryotes - 229 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative At1g69610, Description = Putative ovule protein, PFAM = PF07891)' T '29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben044scf00027156ctg000_11122-16955' '(at3g06180 : 192.0) Ribosomal protein L34e superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195); BEST Arabidopsis thaliana protein match is: Ribosomal protein L34e superfamily protein (TAIR:AT5G19025.1); Has 84 Blast hits to 84 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 73; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative At5g19025, Description = Uncharacterized protein At5g19025, PFAM = )' T '29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben101scf00010_378675-386374' '(at1g73850 : 333.0) FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: endomembrane system, ribosome, intracellular; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195), Protein of unknown function DUF1666 (InterPro:IPR012870); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1666) (TAIR:AT3G20260.1); Has 1252 Blast hits to 1091 proteins in 184 species: Archae - 4; Bacteria - 49; Metazoa - 367; Fungi - 151; Plants - 117; Viruses - 41; Other Eukaryotes - 523 (source: NCBI BLink). & (gnl|cdd|87396 : 293.0) no description available & (reliability: 666.0) & (original description: Putative PGSC0003DMG400020985, Description = DUF1666 family protein, PFAM = PF07891)' T '29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben101scf00155_221945-224613' '(at3g06180 : 82.0) Ribosomal protein L34e superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195); BEST Arabidopsis thaliana protein match is: Ribosomal protein L34e superfamily protein (TAIR:AT5G19025.1); Has 84 Blast hits to 84 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 73; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative Sb03g037880, Description = Putative uncharacterized protein Sb03g037880, PFAM = )' T '29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben101scf00966_166737-173806' '(gnl|cdd|87396 : 299.0) no description available & (at5g39785 : 261.0) FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195), Protein of unknown function DUF1666 (InterPro:IPR012870); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1666) (TAIR:AT1G69610.1); Has 458 Blast hits to 427 proteins in 93 species: Archae - 0; Bacteria - 15; Metazoa - 64; Fungi - 53; Plants - 93; Viruses - 4; Other Eukaryotes - 229 (source: NCBI BLink). & (reliability: 522.0) & (original description: Putative At1g69610, Description = Putative ovule protein, PFAM = PF07891)' T '29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben101scf00966_175313-179423' '(p41098|rl34_tobac : 142.0) 60S ribosomal protein L34 - Nicotiana tabacum (Common tobacco) & (at1g26880 : 139.0) Ribosomal protein L34e superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e, conserved site (InterPro:IPR018065), Ribosomal protein L34e (InterPro:IPR008195); BEST Arabidopsis thaliana protein match is: ribosomal protein L34 (TAIR:AT1G69620.1); Has 937 Blast hits to 937 proteins in 311 species: Archae - 67; Bacteria - 0; Metazoa - 288; Fungi - 137; Plants - 198; Viruses - 0; Other Eukaryotes - 247 (source: NCBI BLink). & (gnl|cdd|37001 : 125.0) no description available & (gnl|cdd|85300 : 102.0) no description available & (reliability: 278.0) & (original description: Putative RPL34, Description = 60S ribosomal protein L34, PFAM = PF01199)' T '29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben101scf01326_393989-400113' '(at5g39785 : 344.0) FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195), Protein of unknown function DUF1666 (InterPro:IPR012870); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1666) (TAIR:AT1G69610.1); Has 458 Blast hits to 427 proteins in 93 species: Archae - 0; Bacteria - 15; Metazoa - 64; Fungi - 53; Plants - 93; Viruses - 4; Other Eukaryotes - 229 (source: NCBI BLink). & (gnl|cdd|87396 : 269.0) no description available & (reliability: 688.0) & (original description: Putative PGSC0003DMG400001422, Description = Putative ovule protein, PFAM = PF07891)' T '29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben101scf03393_41648-48415' '(at3g06180 : 190.0) Ribosomal protein L34e superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195); BEST Arabidopsis thaliana protein match is: Ribosomal protein L34e superfamily protein (TAIR:AT5G19025.1); Has 84 Blast hits to 84 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 73; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 380.0) & (original description: Putative BnaAnng03100D, Description = BnaAnng03100D protein, PFAM = )' T '29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben101scf04290_389305-393672' '(p41098|rl34_tobac : 143.0) 60S ribosomal protein L34 - Nicotiana tabacum (Common tobacco) & (at1g26880 : 139.0) Ribosomal protein L34e superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e, conserved site (InterPro:IPR018065), Ribosomal protein L34e (InterPro:IPR008195); BEST Arabidopsis thaliana protein match is: ribosomal protein L34 (TAIR:AT1G69620.1); Has 937 Blast hits to 937 proteins in 311 species: Archae - 67; Bacteria - 0; Metazoa - 288; Fungi - 137; Plants - 198; Viruses - 0; Other Eukaryotes - 247 (source: NCBI BLink). & (gnl|cdd|37001 : 125.0) no description available & (gnl|cdd|85300 : 102.0) no description available & (reliability: 278.0) & (original description: Putative RPL34, Description = 60S ribosomal protein L34, PFAM = PF01199)' T '29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben101scf05349_117979-129907' '(at3g20260 : 348.0) FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195), Protein of unknown function DUF1666 (InterPro:IPR012870); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1666) (TAIR:AT1G73850.1); Has 288 Blast hits to 284 proteins in 72 species: Archae - 0; Bacteria - 2; Metazoa - 64; Fungi - 36; Plants - 99; Viruses - 14; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|87396 : 268.0) no description available & (reliability: 696.0) & (original description: Putative At3g20260, Description = Putative uncharacterized protein At3g20260, PFAM = PF07891)' T '29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben101scf06537_12368-17260' '(at1g73850 : 345.0) FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: endomembrane system, ribosome, intracellular; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195), Protein of unknown function DUF1666 (InterPro:IPR012870); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1666) (TAIR:AT3G20260.1); Has 1252 Blast hits to 1091 proteins in 184 species: Archae - 4; Bacteria - 49; Metazoa - 367; Fungi - 151; Plants - 117; Viruses - 41; Other Eukaryotes - 523 (source: NCBI BLink). & (gnl|cdd|87396 : 294.0) no description available & (reliability: 690.0) & (original description: Putative BnaC06g34700D, Description = BnaC06g34700D protein, PFAM = PF07891)' T '29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben101scf08357_131070-133735' '(at5g15260 : 205.0) Ribosomal protein L34e superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195); BEST Arabidopsis thaliana protein match is: Ribosomal protein L34e superfamily protein (TAIR:AT3G01170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 410.0) & (original description: Putative At3g01170, Description = At3g01170, PFAM = )' T '29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'niben101scf08724_413906-418641' '(p41098|rl34_tobac : 143.0) 60S ribosomal protein L34 - Nicotiana tabacum (Common tobacco) & (at1g26880 : 139.0) Ribosomal protein L34e superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e, conserved site (InterPro:IPR018065), Ribosomal protein L34e (InterPro:IPR008195); BEST Arabidopsis thaliana protein match is: ribosomal protein L34 (TAIR:AT1G69620.1); Has 937 Blast hits to 937 proteins in 311 species: Archae - 67; Bacteria - 0; Metazoa - 288; Fungi - 137; Plants - 198; Viruses - 0; Other Eukaryotes - 247 (source: NCBI BLink). & (gnl|cdd|37001 : 125.0) no description available & (gnl|cdd|85300 : 102.0) no description available & (reliability: 278.0) & (original description: Putative RPL34, Description = 60S ribosomal protein L34, PFAM = PF01199)' T '29.2.1.2.2.35' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35' 'nbv0.3scaffold8284_37488-41617' '(at5g02610 : 122.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); BEST Arabidopsis thaliana protein match is: Ribosomal L29 family protein (TAIR:AT3G09500.1). & (gnl|cdd|38646 : 91.3) no description available & (reliability: 244.0) & (original description: Putative rpl35, Description = 60S ribosomal protein L35, PFAM = PF00831)' T '29.2.1.2.2.35' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35' 'nbv0.5scaffold1022_326601-470164' '(at5g02610 : 134.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); BEST Arabidopsis thaliana protein match is: Ribosomal L29 family protein (TAIR:AT3G09500.1). & (gnl|cdd|38646 : 91.7) no description available & (reliability: 268.0) & (original description: Putative RPL35, Description = 60S ribosomal protein L35, PFAM = PF00831)' T '29.2.1.2.2.35' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35' 'nbv0.5scaffold7553_20680-24585' '(at5g02610 : 133.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); BEST Arabidopsis thaliana protein match is: Ribosomal L29 family protein (TAIR:AT3G09500.1). & (gnl|cdd|38646 : 106.0) no description available & (reliability: 266.0) & (original description: Putative rpl35, Description = 60S ribosomal protein L35, PFAM = PF00831)' T '29.2.1.2.2.35' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35' 'niben044scf00048884ctg001_1-4319' '(at5g02610 : 138.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); BEST Arabidopsis thaliana protein match is: Ribosomal L29 family protein (TAIR:AT3G09500.1). & (gnl|cdd|38646 : 87.1) no description available & (q8l805|rl35_wheat : 81.6) 60S ribosomal protein L35 - Triticum aestivum (Wheat) & (reliability: 276.0) & (original description: Putative RPL35, Description = 60S ribosomal protein L35, PFAM = PF00831)' T '29.2.1.2.2.35' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35' 'niben101scf02639_304277-308245' '(at5g02610 : 137.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); BEST Arabidopsis thaliana protein match is: Ribosomal L29 family protein (TAIR:AT3G09500.1). & (gnl|cdd|38646 : 98.2) no description available & (q8l805|rl35_wheat : 80.9) 60S ribosomal protein L35 - Triticum aestivum (Wheat) & (reliability: 274.0) & (original description: Putative rpl35, Description = 60S ribosomal protein L35, PFAM = PF00831)' T '29.2.1.2.2.35' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35' 'niben101scf03532_27166-31424' '(at5g02610 : 133.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); BEST Arabidopsis thaliana protein match is: Ribosomal L29 family protein (TAIR:AT3G09500.1). & (gnl|cdd|38646 : 87.8) no description available & (q8l805|rl35_wheat : 80.1) 60S ribosomal protein L35 - Triticum aestivum (Wheat) & (reliability: 266.0) & (original description: Putative rpl35, Description = 60S ribosomal protein L35, PFAM = PF00831)' T '29.2.1.2.2.35' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35' 'niben101scf05676_753453-757589' '(at5g02610 : 138.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); BEST Arabidopsis thaliana protein match is: Ribosomal L29 family protein (TAIR:AT3G09500.1). & (gnl|cdd|38646 : 98.2) no description available & (q8l805|rl35_wheat : 80.5) 60S ribosomal protein L35 - Triticum aestivum (Wheat) & (reliability: 276.0) & (original description: Putative RPL35, Description = 60S ribosomal protein L35, PFAM = PF00831)' T '29.2.1.2.2.35' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35' 'niben101scf08774_10974-14764' '(at5g02610 : 129.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); BEST Arabidopsis thaliana protein match is: Ribosomal L29 family protein (TAIR:AT3G09500.1). & (gnl|cdd|38646 : 101.0) no description available & (reliability: 258.0) & (original description: Putative RPL35, Description = 60S ribosomal protein L35, PFAM = PF00831)' T '29.2.1.2.2.35' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35' 'niben101scf10314_121964-130361' '(at5g02610 : 124.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); BEST Arabidopsis thaliana protein match is: Ribosomal L29 family protein (TAIR:AT3G09500.1). & (gnl|cdd|38646 : 89.8) no description available & (reliability: 248.0) & (original description: Putative rpl35, Description = 60S ribosomal protein L35, PFAM = PF00831)' T '29.2.1.2.2.35' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35' 'niben101scf10747_16461-22231' '(at5g02610 : 145.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); BEST Arabidopsis thaliana protein match is: Ribosomal L29 family protein (TAIR:AT3G09500.1). & (gnl|cdd|38646 : 109.0) no description available & (q8l805|rl35_wheat : 84.3) 60S ribosomal protein L35 - Triticum aestivum (Wheat) & (reliability: 290.0) & (original description: Putative RPL35, Description = 60S ribosomal protein L35, PFAM = PF00831)' T '29.2.1.2.2.36' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L36' 'niben101scf00626_127164-130475' '(p52866|rl36_dauca : 124.0) 60S ribosomal protein L36 - Daucus carota (Carrot) & (at2g37600 : 113.0) Ribosomal protein L36e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L36e (InterPro:IPR000509); BEST Arabidopsis thaliana protein match is: Ribosomal protein L36e family protein (TAIR:AT3G53740.4); Has 756 Blast hits to 755 proteins in 263 species: Archae - 0; Bacteria - 0; Metazoa - 355; Fungi - 140; Plants - 140; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink). & (gnl|cdd|38662 : 99.6) no description available & (gnl|cdd|64991 : 91.2) no description available & (reliability: 226.0) & (original description: Putative RPL36B, Description = 60S ribosomal protein L36-2, PFAM = PF01158)' T '29.2.1.2.2.36' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L36' 'niben101scf01968_3619-6244' '(p52866|rl36_dauca : 124.0) 60S ribosomal protein L36 - Daucus carota (Carrot) & (at2g37600 : 113.0) Ribosomal protein L36e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L36e (InterPro:IPR000509); BEST Arabidopsis thaliana protein match is: Ribosomal protein L36e family protein (TAIR:AT3G53740.4); Has 756 Blast hits to 755 proteins in 263 species: Archae - 0; Bacteria - 0; Metazoa - 355; Fungi - 140; Plants - 140; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink). & (gnl|cdd|38662 : 101.0) no description available & (gnl|cdd|64991 : 93.2) no description available & (reliability: 226.0) & (original description: Putative RPL36, Description = 60S ribosomal protein L36, PFAM = PF01158)' T '29.2.1.2.2.36' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L36' 'niben101scf12718_167514-171186' '(p52866|rl36_dauca : 117.0) 60S ribosomal protein L36 - Daucus carota (Carrot) & (at2g37600 : 114.0) Ribosomal protein L36e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L36e (InterPro:IPR000509); BEST Arabidopsis thaliana protein match is: Ribosomal protein L36e family protein (TAIR:AT3G53740.4); Has 756 Blast hits to 755 proteins in 263 species: Archae - 0; Bacteria - 0; Metazoa - 355; Fungi - 140; Plants - 140; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink). & (gnl|cdd|38662 : 100.0) no description available & (gnl|cdd|64991 : 92.0) no description available & (reliability: 228.0) & (original description: Putative RPL36B, Description = 60S ribosomal protein L36-2, PFAM = PF01158)' T '29.2.1.2.2.37' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L37' 'niben101scf01374_343048-345945' '(at1g52300 : 110.0) Zinc-binding ribosomal protein family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L37e, conserved site (InterPro:IPR018267), Ribosomal protein, zinc-binding domain (InterPro:IPR011332), Ribosomal protein L37ae/L37e, N-terminal domain (InterPro:IPR011331), Ribosomal protein L37e (InterPro:IPR001569); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT3G16080.1); Has 991 Blast hits to 991 proteins in 346 species: Archae - 293; Bacteria - 0; Metazoa - 303; Fungi - 141; Plants - 122; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|38685 : 107.0) no description available & (reliability: 220.0) & (original description: Putative RPL37A, Description = 60S ribosomal protein L37-A, PFAM = PF01907)' T '29.2.1.2.2.37' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L37' 'niben101scf01658_305682-310582' '(at1g15250 : 120.0) Zinc-binding ribosomal protein family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L37e, conserved site (InterPro:IPR018267), Ribosomal protein, zinc-binding domain (InterPro:IPR011332), Ribosomal protein L37ae/L37e, N-terminal domain (InterPro:IPR011331), Ribosomal protein L37e (InterPro:IPR001569); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT3G16080.1); Has 993 Blast hits to 993 proteins in 346 species: Archae - 293; Bacteria - 0; Metazoa - 305; Fungi - 141; Plants - 122; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|38685 : 108.0) no description available & (reliability: 240.0) & (original description: Putative RPL37B, Description = 60S ribosomal protein L37-2, PFAM = PF01907)' T '29.2.1.2.2.37' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L37' 'niben101scf06216_237659-240727' '(at3g16080 : 120.0) Zinc-binding ribosomal protein family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L37e, conserved site (InterPro:IPR018267), Ribosomal protein, zinc-binding domain (InterPro:IPR011332), Ribosomal protein L37ae/L37e, N-terminal domain (InterPro:IPR011331), Ribosomal protein L37e (InterPro:IPR001569); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT1G52300.1); Has 993 Blast hits to 993 proteins in 346 species: Archae - 294; Bacteria - 0; Metazoa - 303; Fungi - 142; Plants - 122; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|38685 : 108.0) no description available & (reliability: 240.0) & (original description: Putative RPL37B, Description = 60S ribosomal protein L37-2, PFAM = PF01907)' T '29.2.1.2.2.38' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L38' 'niben101scf05848_303313-305300' '(at3g59540 : 104.0) Ribosomal L38e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L38e (InterPro:IPR002675); BEST Arabidopsis thaliana protein match is: Ribosomal L38e protein family (TAIR:AT2G43460.1); Has 621 Blast hits to 621 proteins in 253 species: Archae - 3; Bacteria - 0; Metazoa - 265; Fungi - 127; Plants - 120; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|38709 : 96.6) no description available & (gnl|cdd|65567 : 95.5) no description available & (reliability: 208.0) & (original description: Putative RPL38, Description = 60S ribosomal protein L38, PFAM = PF01781)' T '29.2.1.2.2.38' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L38' 'niben101scf06407_45186-48845' '(at3g59540 : 105.0) Ribosomal L38e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L38e (InterPro:IPR002675); BEST Arabidopsis thaliana protein match is: Ribosomal L38e protein family (TAIR:AT2G43460.1); Has 621 Blast hits to 621 proteins in 253 species: Archae - 3; Bacteria - 0; Metazoa - 265; Fungi - 127; Plants - 120; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|38709 : 97.4) no description available & (gnl|cdd|65567 : 95.9) no description available & (reliability: 210.0) & (original description: Putative RPL38, Description = 60S ribosomal protein L38, PFAM = PF01781)' T '29.2.1.2.2.39' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L39' '' '' '29.2.1.2.2.40' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L40' 'niben101scf02131_93813-96222' '(at3g62250 : 131.0) ubiquitin 5 (UBQ5); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: protein ubiquitination involved in ubiquitin-dependent protein catabolic process, translation; LOCATED IN: cytosolic small ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ribosomal protein S27a (InterPro:IPR002906), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 6 (TAIR:AT2G47110.2); Has 12703 Blast hits to 7391 proteins in 781 species: Archae - 108; Bacteria - 19; Metazoa - 5541; Fungi - 1408; Plants - 3106; Viruses - 188; Other Eukaryotes - 2333 (source: NCBI BLink). & (gnl|cdd|29205 : 122.0) no description available & (p69326|ubiq_wheat : 120.0) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|35228 : 120.0) no description available & (reliability: 254.0) & (original description: Putative ubb, Description = Polyubiquitin, PFAM = PF00240)' T '29.2.1.2.2.40' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L40' 'niben101scf02972_920339-926243' '(at3g52590 : 234.0) Ubiquitin extension protein; ubiquitin extension protein 1 (UBQ1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to water deprivation, protein ubiquitination, embryo development ending in seed dormancy; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L40e (InterPro:IPR001975), Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Ubiquitin supergroup;Ribosomal protein L40e (TAIR:AT2G36170.1); Has 12437 Blast hits to 7147 proteins in 724 species: Archae - 0; Bacteria - 19; Metazoa - 5493; Fungi - 1424; Plants - 3085; Viruses - 174; Other Eukaryotes - 2242 (source: NCBI BLink). & (gnl|cdd|35227 : 208.0) no description available & (gnl|cdd|29205 : 145.0) no description available & (p69326|ubiq_wheat : 144.0) Ubiquitin - Triticum aestivum (Wheat) & (reliability: 468.0) & (original description: Putative ubqB, Description = Ubiquitin-60S ribosomal protein L40, PFAM = PF00240;PF01020)' T '29.2.1.2.2.40' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L40' 'niben101scf09620_704174-800860' '(at3g52590 : 185.0) Ubiquitin extension protein; ubiquitin extension protein 1 (UBQ1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to water deprivation, protein ubiquitination, embryo development ending in seed dormancy; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L40e (InterPro:IPR001975), Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Ubiquitin supergroup;Ribosomal protein L40e (TAIR:AT2G36170.1); Has 12437 Blast hits to 7147 proteins in 724 species: Archae - 0; Bacteria - 19; Metazoa - 5493; Fungi - 1424; Plants - 3085; Viruses - 174; Other Eukaryotes - 2242 (source: NCBI BLink). & (gnl|cdd|35227 : 167.0) no description available & (gnl|cdd|29205 : 143.0) no description available & (p69326|ubiq_wheat : 140.0) Ubiquitin - Triticum aestivum (Wheat) & (reliability: 370.0) & (original description: Putative ubqB, Description = Ubiquitin-60S ribosomal protein L40, PFAM = PF00240;PF01020)' T '29.2.1.2.2.41' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L41' '' '' '29.2.1.2.2.44' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L44' '' '' '29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'nbv0.3scaffold49062_7794-14461' '(at4g22380 : 177.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 170.0) no description available & (gnl|cdd|31549 : 98.8) no description available & (reliability: 352.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T '29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'nbv0.5scaffold7788_43434-47582' '(at4g22380 : 182.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 172.0) no description available & (gnl|cdd|85334 : 96.8) no description available & (reliability: 362.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T '29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'niben044scf00001830ctg009_3123-7675' '(at3g62870 : 367.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7A/L8 (InterPro:IPR001921), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT2G47610.1); Has 2083 Blast hits to 2081 proteins in 414 species: Archae - 338; Bacteria - 1; Metazoa - 718; Fungi - 357; Plants - 268; Viruses - 0; Other Eukaryotes - 401 (source: NCBI BLink). & (p35685|rl7a_orysa : 361.0) 60S ribosomal protein L7a - Oryza sativa (Rice) & (gnl|cdd|38376 : 198.0) no description available & (reliability: 734.0) & (original description: Putative rpl7a, Description = 60S ribosomal protein L7a, PFAM = PF01248)' T '29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'niben044scf00018148ctg007_2017-7607' '(at4g22380 : 187.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 176.0) no description available & (gnl|cdd|85334 : 96.4) no description available & (reliability: 372.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T '29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'niben044scf00050988ctg002_979-7601' '(at4g22380 : 177.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 170.0) no description available & (gnl|cdd|31549 : 100.0) no description available & (reliability: 352.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T '29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'niben101scf00110_557369-562820' '(at4g01790 : 137.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); Has 95 Blast hits to 95 proteins in 35 species: Archae - 3; Bacteria - 0; Metazoa - 62; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative T7B11.5, Description = At4g01790, PFAM = PF01248)' T '29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'niben101scf00408_895194-899633' '(at2g47610 : 362.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, nucleolus, plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7A/L8 (InterPro:IPR001921), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT3G62870.1); Has 2106 Blast hits to 2104 proteins in 415 species: Archae - 332; Bacteria - 1; Metazoa - 722; Fungi - 352; Plants - 299; Viruses - 0; Other Eukaryotes - 400 (source: NCBI BLink). & (p35685|rl7a_orysa : 359.0) 60S ribosomal protein L7a - Oryza sativa (Rice) & (gnl|cdd|38376 : 199.0) no description available & (reliability: 724.0) & (original description: Putative rpl8, Description = 60S ribosomal protein L7a, PFAM = PF01248)' T '29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'niben101scf02459_307729-312835' '(at3g62870 : 365.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7A/L8 (InterPro:IPR001921), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT2G47610.1); Has 2083 Blast hits to 2081 proteins in 414 species: Archae - 338; Bacteria - 1; Metazoa - 718; Fungi - 357; Plants - 268; Viruses - 0; Other Eukaryotes - 401 (source: NCBI BLink). & (p35685|rl7a_orysa : 359.0) 60S ribosomal protein L7a - Oryza sativa (Rice) & (gnl|cdd|38376 : 198.0) no description available & (reliability: 730.0) & (original description: Putative rpl7a, Description = 60S ribosomal protein L7a, PFAM = PF01248)' T '29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'niben101scf03147_712098-717944' '(at4g22380 : 182.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 168.0) no description available & (gnl|cdd|31549 : 98.8) no description available & (reliability: 362.0) & (original description: Putative hmg2, Description = NHP2-like protein 1, PFAM = PF01248)' T '29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'niben101scf03273_254124-258620' '(at2g47610 : 362.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, nucleolus, plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7A/L8 (InterPro:IPR001921), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT3G62870.1); Has 2106 Blast hits to 2104 proteins in 415 species: Archae - 332; Bacteria - 1; Metazoa - 722; Fungi - 352; Plants - 299; Viruses - 0; Other Eukaryotes - 400 (source: NCBI BLink). & (p35685|rl7a_orysa : 358.0) 60S ribosomal protein L7a - Oryza sativa (Rice) & (gnl|cdd|38376 : 199.0) no description available & (reliability: 724.0) & (original description: Putative rpl8, Description = 60S ribosomal protein L7a, PFAM = PF01248)' T '29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'niben101scf03738_374285-382459' '(at4g22380 : 182.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 172.0) no description available & (gnl|cdd|85334 : 96.0) no description available & (reliability: 362.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T '29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'niben101scf05708_9686-16304' '(at4g22380 : 148.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 145.0) no description available & (gnl|cdd|31549 : 83.4) no description available & (reliability: 294.0) & (original description: Putative hmg2, Description = NHP2-like protein 1, PFAM = PF01248)' T '29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'niben101scf05955_432793-436224' '(at4g01790 : 129.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); Has 95 Blast hits to 95 proteins in 35 species: Archae - 3; Bacteria - 0; Metazoa - 62; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative T7B11.5, Description = At4g01790, PFAM = PF01248)' T '29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'niben101scf06105_67555-71540' '(at2g47610 : 344.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, nucleolus, plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7A/L8 (InterPro:IPR001921), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT3G62870.1); Has 2106 Blast hits to 2104 proteins in 415 species: Archae - 332; Bacteria - 1; Metazoa - 722; Fungi - 352; Plants - 299; Viruses - 0; Other Eukaryotes - 400 (source: NCBI BLink). & (p35685|rl7a_orysa : 343.0) 60S ribosomal protein L7a - Oryza sativa (Rice) & (gnl|cdd|38376 : 196.0) no description available & (reliability: 688.0) & (original description: Putative v1g236492, Description = Predicted protein, PFAM = PF01248)' T '29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'niben101scf20261_82957-86879' '(at2g47610 : 365.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, nucleolus, plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7A/L8 (InterPro:IPR001921), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT3G62870.1); Has 2106 Blast hits to 2104 proteins in 415 species: Archae - 332; Bacteria - 1; Metazoa - 722; Fungi - 352; Plants - 299; Viruses - 0; Other Eukaryotes - 400 (source: NCBI BLink). & (p35685|rl7a_orysa : 363.0) 60S ribosomal protein L7a - Oryza sativa (Rice) & (gnl|cdd|38376 : 202.0) no description available & (reliability: 730.0) & (original description: Putative RPL7A, Description = 60S Ribosomal Protein L7A, PFAM = PF01248)' T '29.2.1.2.2.80' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P0' 'niben101scf01694_1378315-1383013' '(p50346|rla0_soybn : 432.0) 60S acidic ribosomal protein P0 - Glycine max (Soybean) & (at2g40010 : 427.0) Ribosomal protein L10 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation, translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813), Ribosomal protein L10 (InterPro:IPR001790); BEST Arabidopsis thaliana protein match is: Ribosomal protein L10 family protein (TAIR:AT3G09200.1); Has 1619 Blast hits to 1617 proteins in 478 species: Archae - 322; Bacteria - 4; Metazoa - 504; Fungi - 295; Plants - 181; Viruses - 0; Other Eukaryotes - 313 (source: NCBI BLink). & (gnl|cdd|36033 : 314.0) no description available & (gnl|cdd|81260 : 165.0) no description available & (reliability: 854.0) & (original description: Putative RPP0A, Description = 60S acidic ribosomal protein P0-1, PFAM = PF00428;PF00466)' T '29.2.1.2.2.80' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P0' 'niben101scf02370_187307-191388' '(p50346|rla0_soybn : 456.0) 60S acidic ribosomal protein P0 - Glycine max (Soybean) & (at3g09200 : 447.0) Ribosomal protein L10 family protein; FUNCTIONS IN: structural constituent of ribosome, copper ion binding; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: Ribosomal protein L10 family protein (TAIR:AT3G11250.1); Has 1417 Blast hits to 1416 proteins in 449 species: Archae - 322; Bacteria - 1; Metazoa - 456; Fungi - 192; Plants - 147; Viruses - 0; Other Eukaryotes - 299 (source: NCBI BLink). & (gnl|cdd|36033 : 344.0) no description available & (gnl|cdd|81260 : 168.0) no description available & (reliability: 894.0) & (original description: Putative arp, Description = 60S acidic ribosomal protein P0, PFAM = PF00428;PF00466)' T '29.2.1.2.2.80' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P0' 'niben101scf02383_39933-43831' '(p50346|rla0_soybn : 459.0) 60S acidic ribosomal protein P0 - Glycine max (Soybean) & (at3g09200 : 449.0) Ribosomal protein L10 family protein; FUNCTIONS IN: structural constituent of ribosome, copper ion binding; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: Ribosomal protein L10 family protein (TAIR:AT3G11250.1); Has 1417 Blast hits to 1416 proteins in 449 species: Archae - 322; Bacteria - 1; Metazoa - 456; Fungi - 192; Plants - 147; Viruses - 0; Other Eukaryotes - 299 (source: NCBI BLink). & (gnl|cdd|36033 : 345.0) no description available & (gnl|cdd|81260 : 167.0) no description available & (reliability: 898.0) & (original description: Putative arp, Description = 60S acidic ribosomal protein P0, PFAM = PF00466;PF00428)' T '29.2.1.2.2.80' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P0' 'niben101scf03906_95179-100260' '(at1g25260 : 298.0) Ribosomal protein L10 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L10 (InterPro:IPR001790); BEST Arabidopsis thaliana protein match is: Ribosomal protein L10 family protein (TAIR:AT3G11250.1); Has 1099 Blast hits to 1097 proteins in 339 species: Archae - 116; Bacteria - 0; Metazoa - 360; Fungi - 259; Plants - 172; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (gnl|cdd|36034 : 264.0) no description available & (gnl|cdd|81260 : 82.6) no description available & (reliability: 596.0) & (original description: Putative MRTO4, Description = mRNA turnover protein 4 homolog, PFAM = PF00466)' T '29.2.1.2.2.80' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P0' 'niben101scf10947_141577-146755' '(p50346|rla0_soybn : 466.0) 60S acidic ribosomal protein P0 - Glycine max (Soybean) & (at2g40010 : 448.0) Ribosomal protein L10 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation, translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813), Ribosomal protein L10 (InterPro:IPR001790); BEST Arabidopsis thaliana protein match is: Ribosomal protein L10 family protein (TAIR:AT3G09200.1); Has 1619 Blast hits to 1617 proteins in 478 species: Archae - 322; Bacteria - 4; Metazoa - 504; Fungi - 295; Plants - 181; Viruses - 0; Other Eukaryotes - 313 (source: NCBI BLink). & (gnl|cdd|36033 : 331.0) no description available & (gnl|cdd|81260 : 163.0) no description available & (reliability: 896.0) & (original description: Putative arp, Description = 60S acidic ribosomal protein P0, PFAM = PF00428;PF00466)' T '29.2.1.2.2.81' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P1' 'nbv0.3scaffold2392_44962-48273' '(gnl|cdd|36973 : 103.0) no description available & (at5g24510 : 92.0) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosolic ribosome, ribosome; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT1G01100.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p52855|rla1_maize : 84.7) 60S acidic ribosomal protein P1 (L12) - Zea mays (Maize) & (reliability: 184.0) & (original description: Putative RPP1A, Description = 60S acidic ribosomal protein P1-1, PFAM = PF00428)' T '29.2.1.2.2.81' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P1' 'nbv0.3scaffold59406_152-2683' '(gnl|cdd|36973 : 101.0) no description available & (at5g24510 : 93.2) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosolic ribosome, ribosome; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT1G01100.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p52855|rla1_maize : 91.7) 60S acidic ribosomal protein P1 (L12) - Zea mays (Maize) & (reliability: 186.4) & (original description: Putative RPP1A, Description = 60S acidic ribosomal protein P1-1, PFAM = PF00428)' T '29.2.1.2.2.81' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P1' 'nbv0.5scaffold613_232822-235327' '(gnl|cdd|36973 : 105.0) no description available & (at5g47700 : 90.1) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT4G00810.2); Has 2200 Blast hits to 2200 proteins in 388 species: Archae - 82; Bacteria - 5; Metazoa - 853; Fungi - 492; Plants - 456; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (p52855|rla1_maize : 84.7) 60S acidic ribosomal protein P1 (L12) - Zea mays (Maize) & (reliability: 180.2) & (original description: Putative RPP1B, Description = 60S acidic ribosomal protein P1-2, PFAM = PF00428)' T '29.2.1.2.2.81' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P1' 'niben044scf00009201ctg003_211-2867' '(gnl|cdd|36973 : 106.0) no description available & (at1g01100 : 90.5) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT5G47700.2); Has 2175 Blast hits to 2175 proteins in 383 species: Archae - 76; Bacteria - 0; Metazoa - 858; Fungi - 474; Plants - 451; Viruses - 0; Other Eukaryotes - 316 (source: NCBI BLink). & (p52855|rla1_maize : 86.3) 60S acidic ribosomal protein P1 (L12) - Zea mays (Maize) & (reliability: 181.0) & (original description: Putative RpLP1, Description = 60S acidic ribosomal protein P1, PFAM = PF00428)' T '29.2.1.2.2.81' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P1' 'niben044scf00028455ctg005_2185-5420' '(gnl|cdd|36973 : 104.0) no description available & (at5g24510 : 91.3) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosolic ribosome, ribosome; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT1G01100.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p52855|rla1_maize : 87.0) 60S acidic ribosomal protein P1 (L12) - Zea mays (Maize) & (reliability: 182.6) & (original description: Putative RPP1B, Description = 60S acidic ribosomal protein P1-2, PFAM = PF00428)' T '29.2.1.2.2.81' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P1' 'niben101scf01478_24473-27945' '(gnl|cdd|36973 : 108.0) no description available & (at5g24510 : 102.0) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosolic ribosome, ribosome; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT1G01100.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p52855|rla1_maize : 91.7) 60S acidic ribosomal protein P1 (L12) - Zea mays (Maize) & (reliability: 204.0) & (original description: Putative RPP1B, Description = 60S acidic ribosomal protein P1-2, PFAM = PF00428)' T '29.2.1.2.2.81' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P1' 'niben101scf02450_208960-212477' '(gnl|cdd|36973 : 105.0) no description available & (at5g47700 : 85.9) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT4G00810.2); Has 2200 Blast hits to 2200 proteins in 388 species: Archae - 82; Bacteria - 5; Metazoa - 853; Fungi - 492; Plants - 456; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (p52855|rla1_maize : 82.4) 60S acidic ribosomal protein P1 (L12) - Zea mays (Maize) & (reliability: 171.8) & (original description: Putative prp1, Description = 60S acidic ribosomal protein P1, PFAM = PF00428)' T '29.2.1.2.2.81' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P1' 'niben101scf02700_228612-231244' '(gnl|cdd|36973 : 106.0) no description available & (at5g47700 : 89.4) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT4G00810.2); Has 2200 Blast hits to 2200 proteins in 388 species: Archae - 82; Bacteria - 5; Metazoa - 853; Fungi - 492; Plants - 456; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (p52855|rla1_maize : 86.7) 60S acidic ribosomal protein P1 (L12) - Zea mays (Maize) & (reliability: 178.8) & (original description: Putative RPP1A, Description = 60S acidic ribosomal protein P1, PFAM = PF00428)' T '29.2.1.2.2.81' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P1' 'niben101scf05732_26134-28636' '(gnl|cdd|36973 : 108.0) no description available & (at1g01100 : 89.0) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT5G47700.2); Has 2175 Blast hits to 2175 proteins in 383 species: Archae - 76; Bacteria - 0; Metazoa - 858; Fungi - 474; Plants - 451; Viruses - 0; Other Eukaryotes - 316 (source: NCBI BLink). & (p52855|rla1_maize : 85.1) 60S acidic ribosomal protein P1 (L12) - Zea mays (Maize) & (reliability: 178.0) & (original description: Putative RPP1A, Description = 60S acidic ribosomal protein P1-1, PFAM = PF00428)' T '29.2.1.2.2.81' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P1' 'niben101scf05867_1-2801' '(gnl|cdd|36973 : 99.7) no description available & (at5g24510 : 94.0) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosolic ribosome, ribosome; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT1G01100.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p52855|rla1_maize : 85.9) 60S acidic ribosomal protein P1 (L12) - Zea mays (Maize) & (reliability: 188.0) & (original description: Putative RPP1B, Description = 60S acidic ribosomal protein P1-2, PFAM = PF00428)' T '29.2.1.2.2.81' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P1' 'niben101scf07182_131868-135392' '(gnl|cdd|36973 : 105.0) no description available & (at5g47700 : 88.6) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT4G00810.2); Has 2200 Blast hits to 2200 proteins in 388 species: Archae - 82; Bacteria - 5; Metazoa - 853; Fungi - 492; Plants - 456; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (p52855|rla1_maize : 84.3) 60S acidic ribosomal protein P1 (L12) - Zea mays (Maize) & (reliability: 177.2) & (original description: Putative prp1, Description = Acidic ribosomal protein 1, PFAM = PF00428)' T '29.2.1.2.2.81' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P1' 'niben101scf07202_56133-59444' '(gnl|cdd|36973 : 100.0) no description available & (at5g24510 : 84.0) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosolic ribosome, ribosome; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT1G01100.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative RPP1A, Description = 60S acidic ribosomal protein P1-1, PFAM = PF00428)' T '29.2.1.2.2.82' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P2' 'nbv0.5scaffold79597_1-484' '(gnl|cdd|38659 : 91.1) no description available & (o24415|rla2b_maize : 89.7) 60S acidic ribosomal protein P2B - Zea mays (Maize) & (at2g27710 : 85.9) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation, response to cold; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT2G27720.1). & (reliability: 171.8) & (original description: Putative rla6, Description = 60S acidic ribosomal protein P2, PFAM = PF00428)' T '29.2.1.2.2.82' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P2' 'niben044scf00000941ctg003_1-3960' '(gnl|cdd|38659 : 118.0) no description available & (p46252|rla2a_maize : 86.3) 60S acidic ribosomal protein P2A (P2) - Zea mays (Maize) & (at2g27710 : 80.5) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation, response to cold; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT2G27720.1). & (reliability: 161.0) & (original description: Putative RPP2D, Description = 60S acidic ribosomal protein P2-4, PFAM = PF00428)' T '29.2.1.2.2.82' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P2' 'niben044scf00005878ctg017_18726-22013' '(gnl|cdd|38659 : 116.0) no description available & (p46252|rla2a_maize : 87.4) 60S acidic ribosomal protein P2A (P2) - Zea mays (Maize) & (at2g27710 : 82.8) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation, response to cold; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT2G27720.1). & (reliability: 165.6) & (original description: Putative RPP2B, Description = 60S acidic ribosomal protein P2B, PFAM = PF00428)' T '29.2.1.2.2.82' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P2' 'niben101scf02467_145407-147495' '(gnl|cdd|38659 : 99.2) no description available & (at3g28500 : 81.6) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosol, cytosolic ribosome, ribosome, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT5G40040.1); Has 1217 Blast hits to 1216 proteins in 338 species: Archae - 72; Bacteria - 1; Metazoa - 371; Fungi - 279; Plants - 263; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink). & (o24415|rla2b_maize : 80.5) 60S acidic ribosomal protein P2B - Zea mays (Maize) & (reliability: 163.2) & (original description: Putative RPP2C, Description = 60S acidic ribosomal protein P2-3, PFAM = PF00428)' T '29.2.1.2.2.82' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P2' 'niben101scf03113_180548-184355' '(gnl|cdd|38659 : 120.0) no description available & (p46252|rla2a_maize : 84.7) 60S acidic ribosomal protein P2A (P2) - Zea mays (Maize) & (at2g27710 : 80.1) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation, response to cold; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT2G27720.1). & (reliability: 160.2) & (original description: Putative p2, Description = 60S acidic ribosomal protein P2, PFAM = PF00428)' T '29.2.1.2.2.82' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P2' 'niben101scf05804_330507-373666' '(gnl|cdd|38659 : 93.0) no description available & (at3g28500 : 81.3) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosol, cytosolic ribosome, ribosome, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT5G40040.1); Has 1217 Blast hits to 1216 proteins in 338 species: Archae - 72; Bacteria - 1; Metazoa - 371; Fungi - 279; Plants - 263; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink). & (o24415|rla2b_maize : 80.5) 60S acidic ribosomal protein P2B - Zea mays (Maize) & (reliability: 162.6) & (original description: Putative CBG18296, Description = Protein CBG18296, PFAM = PF00428)' T '29.2.1.2.2.82' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P2' 'niben101scf11937_233018-236727' '(gnl|cdd|38659 : 116.0) no description available & (o24415|rla2b_maize : 87.4) 60S acidic ribosomal protein P2B - Zea mays (Maize) & (at2g27710 : 84.3) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation, response to cold; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT2G27720.1). & (reliability: 168.6) & (original description: Putative rpp2, Description = Ribosomal protein P2, PFAM = PF00428)' T '29.2.1.2.2.83' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P3' 'niben044scf00031373ctg006_441-5211' '(at5g57290 : 89.7) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosolic ribosome, ribosome, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT4G25890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o24413|rla3_maize : 84.0) 60S acidic ribosomal protein P3 (P1/P2-like) (P3A) - Zea mays (Maize) & (reliability: 179.4) & (original description: Putative RPP3A, Description = 60S acidic ribosomal protein P3, PFAM = PF00428)' T '29.2.1.2.2.83' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P3' 'niben101scf17290_1-4493' '(at5g57290 : 92.4) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosolic ribosome, ribosome, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT4G25890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o24413|rla3_maize : 92.4) 60S acidic ribosomal protein P3 (P1/P2-like) (P3A) - Zea mays (Maize) & (reliability: 184.8) & (original description: Putative RPP3A, Description = 60S acidic ribosomal protein P3, PFAM = PF00428)' T '29.2.1.2.2.99' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.unknown' 'nbv0.3scaffold61563_1347-7471' '(at3g58660 : 267.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: nucleolus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G42650.1); Has 3644 Blast hits to 2818 proteins in 411 species: Archae - 34; Bacteria - 198; Metazoa - 1370; Fungi - 494; Plants - 482; Viruses - 5; Other Eukaryotes - 1061 (source: NCBI BLink). & (gnl|cdd|36898 : 216.0) no description available & (reliability: 534.0) & (original description: Putative BnaC08g29370D, Description = BnaC08g29370D protein, PFAM = PF00687)' T '29.2.1.2.2.99' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.unknown' 'nbv0.5scaffold467_279588-285712' '(at3g58660 : 272.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: nucleolus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G42650.1); Has 3644 Blast hits to 2818 proteins in 411 species: Archae - 34; Bacteria - 198; Metazoa - 1370; Fungi - 494; Plants - 482; Viruses - 5; Other Eukaryotes - 1061 (source: NCBI BLink). & (gnl|cdd|36898 : 219.0) no description available & (reliability: 544.0) & (original description: Putative BnaA04g01900D, Description = BnaA04g01900D protein, PFAM = PF00687)' T '29.2.1.2.2.99' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.unknown' 'niben044scf00002763ctg004_21273-24776' '(at3g58660 : 270.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: nucleolus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G42650.1); Has 3644 Blast hits to 2818 proteins in 411 species: Archae - 34; Bacteria - 198; Metazoa - 1370; Fungi - 494; Plants - 482; Viruses - 5; Other Eukaryotes - 1061 (source: NCBI BLink). & (gnl|cdd|36898 : 209.0) no description available & (reliability: 540.0) & (original description: Putative BnaA04g01900D, Description = BnaA04g01900D protein, PFAM = PF00687)' T '29.2.1.2.2.99' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.unknown' 'niben101scf00474_1324935-1332391' '(at5g40080 : 119.0) Mitochondrial ribosomal protein L27; CONTAINS InterPro DOMAIN/s: Ribosomal protein L27/L41, mitochondrial (InterPro:IPR019189); BEST Arabidopsis thaliana protein match is: Mitochondrial ribosomal protein L27 (TAIR:AT5G39800.1); Has 192 Blast hits to 192 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 84; Fungi - 37; Plants - 52; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|39953 : 90.9) no description available & (reliability: 238.0) & (original description: Putative At5g40080, Description = At5g40080, PFAM = PF09809)' T '29.2.1.2.2.99' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.unknown' 'niben101scf02537_1857443-1872707' '(at5g40080 : 99.8) Mitochondrial ribosomal protein L27; CONTAINS InterPro DOMAIN/s: Ribosomal protein L27/L41, mitochondrial (InterPro:IPR019189); BEST Arabidopsis thaliana protein match is: Mitochondrial ribosomal protein L27 (TAIR:AT5G39800.1); Has 192 Blast hits to 192 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 84; Fungi - 37; Plants - 52; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 199.6) & (original description: Putative PHYPADRAFT_223708, Description = Predicted protein, PFAM = PF09809)' T '29.2.1.2.2.99' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.unknown' 'niben101scf04181_94775-97603' '(at3g58660 : 190.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: nucleolus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G42650.1); Has 3644 Blast hits to 2818 proteins in 411 species: Archae - 34; Bacteria - 198; Metazoa - 1370; Fungi - 494; Plants - 482; Viruses - 5; Other Eukaryotes - 1061 (source: NCBI BLink). & (gnl|cdd|36898 : 145.0) no description available & (reliability: 380.0) & (original description: Putative Ccrd_009346, Description = Ribosomal protein L1, PFAM = PF00687)' T '29.2.1.2.2.99' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.unknown' 'niben101scf04813_336790-344134' '(at3g58660 : 272.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: nucleolus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G42650.1); Has 3644 Blast hits to 2818 proteins in 411 species: Archae - 34; Bacteria - 198; Metazoa - 1370; Fungi - 494; Plants - 482; Viruses - 5; Other Eukaryotes - 1061 (source: NCBI BLink). & (gnl|cdd|36898 : 222.0) no description available & (reliability: 544.0) & (original description: Putative T2D23.8, Description = Ribosomal protein L1p/L10e family, PFAM = PF00687)' T '29.2.1.2.2.141' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L4/L1' 'niben044scf00039797ctg000_1-4257' '(at3g09630 : 562.0) Ribosomal protein L4/L1 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4/L1e (InterPro:IPR002136), Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site (InterPro:IPR013000); BEST Arabidopsis thaliana protein match is: Ribosomal protein L4/L1 family (TAIR:AT5G02870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36688 : 450.0) no description available & (gnl|cdd|81272 : 233.0) no description available & (reliability: 1124.0) & (original description: Putative RPL4D, Description = 60S ribosomal protein L4-2, PFAM = PF00573;PF14374)' T '29.2.1.2.2.141' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L4/L1' 'niben101scf00294_310049-315068' '(at3g09630 : 556.0) Ribosomal protein L4/L1 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4/L1e (InterPro:IPR002136), Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site (InterPro:IPR013000); BEST Arabidopsis thaliana protein match is: Ribosomal protein L4/L1 family (TAIR:AT5G02870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36688 : 451.0) no description available & (gnl|cdd|81272 : 237.0) no description available & (reliability: 1112.0) & (original description: Putative RPL4D, Description = 60S ribosomal protein L4-2, PFAM = PF14374;PF00573)' T '29.2.1.2.2.141' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L4/L1' 'niben101scf00496_154310-158737' '(at3g09630 : 561.0) Ribosomal protein L4/L1 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4/L1e (InterPro:IPR002136), Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site (InterPro:IPR013000); BEST Arabidopsis thaliana protein match is: Ribosomal protein L4/L1 family (TAIR:AT5G02870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36688 : 450.0) no description available & (gnl|cdd|81272 : 232.0) no description available & (reliability: 1122.0) & (original description: Putative RPL4, Description = Ribosomal protein L4, PFAM = PF00573;PF14374)' T '29.2.1.2.2.141' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L4/L1' 'niben101scf10228_17169-21503' '(at3g09630 : 554.0) Ribosomal protein L4/L1 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4/L1e (InterPro:IPR002136), Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site (InterPro:IPR013000); BEST Arabidopsis thaliana protein match is: Ribosomal protein L4/L1 family (TAIR:AT5G02870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36688 : 447.0) no description available & (gnl|cdd|81272 : 237.0) no description available & (reliability: 1108.0) & (original description: Putative RPL4D, Description = 60S ribosomal protein L4-2, PFAM = PF14374;PF00573)' T '29.2.1.2.2.510' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10A' 'niben044scf00013207ctg001_2680-6993' '(at1g08360 : 339.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G27530.2); Has 3821 Blast hits to 3820 proteins in 1247 species: Archae - 280; Bacteria - 1757; Metazoa - 462; Fungi - 186; Plants - 511; Viruses - 0; Other Eukaryotes - 625 (source: NCBI BLink). & (gnl|cdd|36783 : 284.0) no description available & (q9sw75|rl10a_chlre : 253.0) 60S ribosomal protein L10a - Chlamydomonas reinhardtii & (gnl|cdd|84952 : 141.0) no description available & (reliability: 674.0) & (original description: Putative r10a, Description = Ribosomal protein, PFAM = PF00687)' T '29.2.1.2.2.510' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10A' 'niben044scf00038689ctg002_34281-38257' '(at1g08360 : 333.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G27530.2); Has 3821 Blast hits to 3820 proteins in 1247 species: Archae - 280; Bacteria - 1757; Metazoa - 462; Fungi - 186; Plants - 511; Viruses - 0; Other Eukaryotes - 625 (source: NCBI BLink). & (gnl|cdd|36783 : 279.0) no description available & (q9sw75|rl10a_chlre : 247.0) 60S ribosomal protein L10a - Chlamydomonas reinhardtii & (gnl|cdd|84952 : 141.0) no description available & (reliability: 664.0) & (original description: Putative r10a, Description = Ribosomal protein, PFAM = PF00687)' T '29.2.1.2.2.510' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10A' 'niben101scf00085_307657-312830' '(at1g08360 : 335.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G27530.2); Has 3821 Blast hits to 3820 proteins in 1247 species: Archae - 280; Bacteria - 1757; Metazoa - 462; Fungi - 186; Plants - 511; Viruses - 0; Other Eukaryotes - 625 (source: NCBI BLink). & (gnl|cdd|36783 : 279.0) no description available & (q9sw75|rl10a_chlre : 249.0) 60S ribosomal protein L10a - Chlamydomonas reinhardtii & (gnl|cdd|84952 : 140.0) no description available & (reliability: 662.0) & (original description: Putative r10a, Description = Ribosomal protein, PFAM = PF00687)' T '29.2.1.2.2.510' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10A' 'niben101scf02510_433985-438094' '(at1g08360 : 335.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G27530.2); Has 3821 Blast hits to 3820 proteins in 1247 species: Archae - 280; Bacteria - 1757; Metazoa - 462; Fungi - 186; Plants - 511; Viruses - 0; Other Eukaryotes - 625 (source: NCBI BLink). & (gnl|cdd|36783 : 281.0) no description available & (q9sw75|rl10a_chlre : 248.0) 60S ribosomal protein L10a - Chlamydomonas reinhardtii & (gnl|cdd|84952 : 140.0) no description available & (reliability: 668.0) & (original description: Putative r10a, Description = Ribosomal protein, PFAM = PF00687)' T '29.2.1.2.2.510' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10A' 'niben101scf04134_218521-222713' '(at5g22440 : 338.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT1G08360.1); Has 4875 Blast hits to 4874 proteins in 1649 species: Archae - 280; Bacteria - 2611; Metazoa - 459; Fungi - 187; Plants - 522; Viruses - 0; Other Eukaryotes - 816 (source: NCBI BLink). & (gnl|cdd|36783 : 284.0) no description available & (q9sw75|rl10a_chlre : 253.0) 60S ribosomal protein L10a - Chlamydomonas reinhardtii & (gnl|cdd|84952 : 141.0) no description available & (reliability: 676.0) & (original description: Putative r10a, Description = Ribosomal protein, PFAM = PF00687)' T '29.2.1.2.2.513' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13A' 'niben044scf00021399ctg012_1-3610' '(at3g24830 : 234.0) Ribosomal protein L13 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13 (InterPro:IPR005822), Ribosomal protein L13, eukaryotic/archaeal (InterPro:IPR005755); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT3G07110.1); Has 2057 Blast hits to 2057 proteins in 651 species: Archae - 298; Bacteria - 471; Metazoa - 343; Fungi - 197; Plants - 326; Viruses - 0; Other Eukaryotes - 422 (source: NCBI BLink). & (o49885|rl13a_luplu : 217.0) 60S ribosomal protein L13a - Lupinus luteus (European yellow lupin) & (gnl|cdd|38414 : 144.0) no description available & (gnl|cdd|84874 : 113.0) no description available & (reliability: 468.0) & (original description: Putative RPL13A, Description = 60S ribosomal protein L13a, PFAM = PF00572)' T '29.2.1.2.2.513' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13A' 'niben101scf03488_924957-929736' '(at5g48760 : 347.0) Ribosomal protein L13 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13 (InterPro:IPR005822), Ribosomal protein L13, eukaryotic/archaeal (InterPro:IPR005755); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT4G13170.1); Has 2418 Blast hits to 2418 proteins in 794 species: Archae - 297; Bacteria - 790; Metazoa - 343; Fungi - 187; Plants - 326; Viruses - 0; Other Eukaryotes - 475 (source: NCBI BLink). & (o49885|rl13a_luplu : 318.0) 60S ribosomal protein L13a - Lupinus luteus (European yellow lupin) & (gnl|cdd|38414 : 217.0) no description available & (gnl|cdd|88313 : 112.0) no description available & (reliability: 694.0) & (original description: Putative rpl16, Description = 60S ribosomal protein L13a, PFAM = PF00572)' T '29.2.1.2.2.513' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13A' 'niben101scf06954_389016-393403' '(at3g07110 : 346.0) Ribosomal protein L13 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, nucleolus, large ribosomal subunit, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13 (InterPro:IPR005822), Ribosomal protein L13, eukaryotic/archaeal (InterPro:IPR005755); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT5G48760.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o49885|rl13a_luplu : 321.0) 60S ribosomal protein L13a - Lupinus luteus (European yellow lupin) & (gnl|cdd|38414 : 219.0) no description available & (gnl|cdd|88313 : 112.0) no description available & (reliability: 692.0) & (original description: Putative RPL13AB, Description = 60S ribosomal protein L13a-2, PFAM = PF00572)' T '29.2.1.2.2.513' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13A' 'niben101scf06980_82199-86042' '(at5g48760 : 345.0) Ribosomal protein L13 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13 (InterPro:IPR005822), Ribosomal protein L13, eukaryotic/archaeal (InterPro:IPR005755); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT4G13170.1); Has 2418 Blast hits to 2418 proteins in 794 species: Archae - 297; Bacteria - 790; Metazoa - 343; Fungi - 187; Plants - 326; Viruses - 0; Other Eukaryotes - 475 (source: NCBI BLink). & (o49885|rl13a_luplu : 325.0) 60S ribosomal protein L13a - Lupinus luteus (European yellow lupin) & (gnl|cdd|38414 : 219.0) no description available & (gnl|cdd|88313 : 112.0) no description available & (reliability: 690.0) & (original description: Putative RPL13A, Description = 60S ribosomal protein L13a, PFAM = PF00572)' T '29.2.1.2.2.513' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13A' 'niben101scf13099_116503-120602' '(at3g24830 : 230.0) Ribosomal protein L13 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13 (InterPro:IPR005822), Ribosomal protein L13, eukaryotic/archaeal (InterPro:IPR005755); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT3G07110.1); Has 2057 Blast hits to 2057 proteins in 651 species: Archae - 298; Bacteria - 471; Metazoa - 343; Fungi - 197; Plants - 326; Viruses - 0; Other Eukaryotes - 422 (source: NCBI BLink). & (o49885|rl13a_luplu : 218.0) 60S ribosomal protein L13a - Lupinus luteus (European yellow lupin) & (gnl|cdd|38414 : 141.0) no description available & (gnl|cdd|84874 : 112.0) no description available & (reliability: 460.0) & (original description: Putative rpl13, Description = 60S ribosomal protein L13a, PFAM = PF00572)' T '29.2.1.2.2.518' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18A' 'niben101scf02613_112776-116550' '(at1g29970 : 315.0) 60S ribosomal protein L18A-1; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT1G17080.1); Has 80 Blast hits to 80 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q943f3|rl18a_orysa : 288.0) 60S ribosomal protein L18a - Oryza sativa (Rice) & (gnl|cdd|36047 : 252.0) no description available & (gnl|cdd|65561 : 249.0) no description available & (reliability: 630.0) & (original description: Putative RPL18AB, Description = 60S ribosomal protein L18a-2, PFAM = PF01775)' T '29.2.1.2.2.518' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18A' 'niben101scf04945_219402-230058' '(at1g17080 : 92.8) Ribosomal protein L18ae family; BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT1G53560.1); Has 119 Blast hits to 119 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 119; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative RPL18AA, Description = 60S ribosomal protein L18a-1, PFAM = )' T '29.2.1.2.2.518' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18A' 'niben101scf08792_48052-51892' '(at1g29970 : 312.0) 60S ribosomal protein L18A-1; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT1G17080.1); Has 80 Blast hits to 80 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q943f3|rl18a_orysa : 288.0) 60S ribosomal protein L18a - Oryza sativa (Rice) & (gnl|cdd|36047 : 250.0) no description available & (gnl|cdd|65561 : 247.0) no description available & (reliability: 624.0) & (original description: Putative RPL18a, Description = 60S ribosomal protein L18a, PFAM = PF01775)' T '29.2.1.2.2.518' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18A' 'niben101scf12017_30244-34553' '(at1g29970 : 313.0) 60S ribosomal protein L18A-1; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT1G17080.1); Has 80 Blast hits to 80 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q943f3|rl18a_orysa : 287.0) 60S ribosomal protein L18a - Oryza sativa (Rice) & (gnl|cdd|36047 : 252.0) no description available & (gnl|cdd|65561 : 248.0) no description available & (reliability: 626.0) & (original description: Putative RPL18, Description = 60S ribosomal protein L18a, PFAM = PF01775)' T '29.2.1.2.2.523' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23A' 'nbv0.3scaffold32222_348-4121' '(q07761|rl23a_tobac : 154.0) 60S ribosomal protein L23a (L25) - Nicotiana tabacum (Common tobacco) & (at3g55280 : 117.0) 60S ribosomal protein L23A (RPL23aB). Paralog of RPL23aA.; ribosomal protein L23AB (RPL23AB); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleotide binding; INVOLVED IN: response to oxidative stress, response to high light intensity, response to cold, translation, ribosome biogenesis; LOCATED IN: cytosolic large ribosomal subunit, intracellular, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L23/L25, conserved site (InterPro:IPR001014), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L23/L25, N-terminal (InterPro:IPR005633), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein L25/L23 (InterPro:IPR013025), Ribosomal protein L23 (InterPro:IPR019985); BEST Arabidopsis thaliana protein match is: ribosomal protein L23AA (TAIR:AT2G39460.2); Has 2615 Blast hits to 2615 proteins in 920 species: Archae - 307; Bacteria - 1160; Metazoa - 408; Fungi - 134; Plants - 120; Viruses - 0; Other Eukaryotes - 486 (source: NCBI BLink). & (gnl|cdd|36962 : 113.0) no description available & (reliability: 234.0) & (original description: Putative RPL23A, Description = 60S ribosomal protein L23a, PFAM = PF03939;PF00276)' T '29.2.1.2.2.523' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23A' 'nbv0.3scaffold54564_3827-8208' '(q07761|rl23a_tobac : 165.0) 60S ribosomal protein L23a (L25) - Nicotiana tabacum (Common tobacco) & (at2g39460 : 153.0) Encodes a 60S ribosomal protein L23aA (AtrpL23aA). Paralog of RLPL23aB.; ribosomal protein L23AA (RPL23AA); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleotide binding; INVOLVED IN: response to oxidative stress, response to high light intensity, response to cold, translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, intracellular, large ribosomal subunit; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L23/L25, conserved site (InterPro:IPR001014), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L23/L25, N-terminal (InterPro:IPR005633), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein L25/L23 (InterPro:IPR013025), Ribosomal protein L23 (InterPro:IPR019985); BEST Arabidopsis thaliana protein match is: ribosomal protein L23AB (TAIR:AT3G55280.2); Has 2634 Blast hits to 2634 proteins in 929 species: Archae - 307; Bacteria - 1168; Metazoa - 411; Fungi - 142; Plants - 120; Viruses - 0; Other Eukaryotes - 486 (source: NCBI BLink). & (gnl|cdd|36962 : 150.0) no description available & (reliability: 306.0) & (original description: Putative RPL23A, Description = 60S ribosomal protein L23a, PFAM = PF00276;PF03939)' T '29.2.1.2.2.523' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23A' 'niben101scf00059_505657-509563' '(q07761|rl23a_tobac : 193.0) 60S ribosomal protein L23a (L25) - Nicotiana tabacum (Common tobacco) & (at2g39460 : 157.0) Encodes a 60S ribosomal protein L23aA (AtrpL23aA). Paralog of RLPL23aB.; ribosomal protein L23AA (RPL23AA); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleotide binding; INVOLVED IN: response to oxidative stress, response to high light intensity, response to cold, translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, intracellular, large ribosomal subunit; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L23/L25, conserved site (InterPro:IPR001014), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L23/L25, N-terminal (InterPro:IPR005633), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein L25/L23 (InterPro:IPR013025), Ribosomal protein L23 (InterPro:IPR019985); BEST Arabidopsis thaliana protein match is: ribosomal protein L23AB (TAIR:AT3G55280.2); Has 2634 Blast hits to 2634 proteins in 929 species: Archae - 307; Bacteria - 1168; Metazoa - 411; Fungi - 142; Plants - 120; Viruses - 0; Other Eukaryotes - 486 (source: NCBI BLink). & (gnl|cdd|36962 : 149.0) no description available & (reliability: 314.0) & (original description: Putative RPL23A, Description = 60S ribosomal protein L23a, PFAM = PF03939;PF00276)' T '29.2.1.2.2.523' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23A' 'niben101scf04391_426479-430847' '(q07761|rl23a_tobac : 174.0) 60S ribosomal protein L23a (L25) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36962 : 152.0) no description available & (at2g39460 : 151.0) Encodes a 60S ribosomal protein L23aA (AtrpL23aA). Paralog of RLPL23aB.; ribosomal protein L23AA (RPL23AA); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleotide binding; INVOLVED IN: response to oxidative stress, response to high light intensity, response to cold, translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, intracellular, large ribosomal subunit; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L23/L25, conserved site (InterPro:IPR001014), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L23/L25, N-terminal (InterPro:IPR005633), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein L25/L23 (InterPro:IPR013025), Ribosomal protein L23 (InterPro:IPR019985); BEST Arabidopsis thaliana protein match is: ribosomal protein L23AB (TAIR:AT3G55280.2); Has 2634 Blast hits to 2634 proteins in 929 species: Archae - 307; Bacteria - 1168; Metazoa - 411; Fungi - 142; Plants - 120; Viruses - 0; Other Eukaryotes - 486 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative rp123, Description = 60S ribosomal protein L23a, PFAM = PF03939;PF00276)' T '29.2.1.2.2.523' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23A' 'niben101scf10015_554586-557635' '(q07761|rl23a_tobac : 167.0) 60S ribosomal protein L23a (L25) - Nicotiana tabacum (Common tobacco) & (at2g39460 : 159.0) Encodes a 60S ribosomal protein L23aA (AtrpL23aA). Paralog of RLPL23aB.; ribosomal protein L23AA (RPL23AA); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleotide binding; INVOLVED IN: response to oxidative stress, response to high light intensity, response to cold, translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, intracellular, large ribosomal subunit; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L23/L25, conserved site (InterPro:IPR001014), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L23/L25, N-terminal (InterPro:IPR005633), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein L25/L23 (InterPro:IPR013025), Ribosomal protein L23 (InterPro:IPR019985); BEST Arabidopsis thaliana protein match is: ribosomal protein L23AB (TAIR:AT3G55280.2); Has 2634 Blast hits to 2634 proteins in 929 species: Archae - 307; Bacteria - 1168; Metazoa - 411; Fungi - 142; Plants - 120; Viruses - 0; Other Eukaryotes - 486 (source: NCBI BLink). & (gnl|cdd|36962 : 145.0) no description available & (reliability: 318.0) & (original description: Putative RPL23A, Description = 60S ribosomal protein L23A, PFAM = PF03939;PF00276)' T '29.2.1.2.2.523' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23A' 'niben101scf14010_178443-182476' '(q07761|rl23a_tobac : 169.0) 60S ribosomal protein L23a (L25) - Nicotiana tabacum (Common tobacco) & (at2g39460 : 152.0) Encodes a 60S ribosomal protein L23aA (AtrpL23aA). Paralog of RLPL23aB.; ribosomal protein L23AA (RPL23AA); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleotide binding; INVOLVED IN: response to oxidative stress, response to high light intensity, response to cold, translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, intracellular, large ribosomal subunit; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L23/L25, conserved site (InterPro:IPR001014), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L23/L25, N-terminal (InterPro:IPR005633), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein L25/L23 (InterPro:IPR013025), Ribosomal protein L23 (InterPro:IPR019985); BEST Arabidopsis thaliana protein match is: ribosomal protein L23AB (TAIR:AT3G55280.2); Has 2634 Blast hits to 2634 proteins in 929 species: Archae - 307; Bacteria - 1168; Metazoa - 411; Fungi - 142; Plants - 120; Viruses - 0; Other Eukaryotes - 486 (source: NCBI BLink). & (gnl|cdd|36962 : 149.0) no description available & (reliability: 304.0) & (original description: Putative rp123, Description = 60S ribosomal protein L23a, PFAM = PF03939;PF00276)' T '29.2.1.2.2.523' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23A' 'niben101scf17764_172152-177557' '(q9at35|rl23a_dauca : 106.0) 60S ribosomal protein L23a - Daucus carota (Carrot) & (gnl|cdd|36962 : 98.1) no description available & (at3g55280 : 95.9) 60S ribosomal protein L23A (RPL23aB). Paralog of RPL23aA.; ribosomal protein L23AB (RPL23AB); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleotide binding; INVOLVED IN: response to oxidative stress, response to high light intensity, response to cold, translation, ribosome biogenesis; LOCATED IN: cytosolic large ribosomal subunit, intracellular, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L23/L25, conserved site (InterPro:IPR001014), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L23/L25, N-terminal (InterPro:IPR005633), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein L25/L23 (InterPro:IPR013025), Ribosomal protein L23 (InterPro:IPR019985); BEST Arabidopsis thaliana protein match is: ribosomal protein L23AA (TAIR:AT2G39460.2); Has 2615 Blast hits to 2615 proteins in 920 species: Archae - 307; Bacteria - 1160; Metazoa - 408; Fungi - 134; Plants - 120; Viruses - 0; Other Eukaryotes - 486 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative RPL23A, Description = 60S ribosomal protein L23a, PFAM = PF00276)' T '29.2.1.2.2.527' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L27A' 'niben101scf04099_33804-36247' '(at1g70600 : 225.0) Ribosomal protein L18e/L15 superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, membrane; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L15, conserved site (InterPro:IPR001196); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18e/L15 superfamily protein (TAIR:AT1G23290.1); Has 1077 Blast hits to 1077 proteins in 419 species: Archae - 174; Bacteria - 17; Metazoa - 357; Fungi - 165; Plants - 139; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|36953 : 195.0) no description available & (gnl|cdd|81945 : 90.3) no description available & (reliability: 450.0) & (original description: Putative rpl27a, Description = 60S ribosomal protein L27a, PFAM = PF00828)' T '29.2.1.2.2.527' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L27A' 'niben101scf08873_242755-245198' '(at1g70600 : 230.0) Ribosomal protein L18e/L15 superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, membrane; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L15, conserved site (InterPro:IPR001196); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18e/L15 superfamily protein (TAIR:AT1G23290.1); Has 1077 Blast hits to 1077 proteins in 419 species: Archae - 174; Bacteria - 17; Metazoa - 357; Fungi - 165; Plants - 139; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|36953 : 194.0) no description available & (gnl|cdd|81945 : 89.5) no description available & (reliability: 460.0) & (original description: Putative rpl27a, Description = S60 ribosomal protein L27a, PFAM = PF00828)' T '29.2.1.2.2.527' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L27A' 'niben101scf16592_35334-37777' '(at1g70600 : 230.0) Ribosomal protein L18e/L15 superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, membrane; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L15, conserved site (InterPro:IPR001196); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18e/L15 superfamily protein (TAIR:AT1G23290.1); Has 1077 Blast hits to 1077 proteins in 419 species: Archae - 174; Bacteria - 17; Metazoa - 357; Fungi - 165; Plants - 139; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|36953 : 195.0) no description available & (gnl|cdd|81945 : 89.1) no description available & (reliability: 460.0) & (original description: Putative RPL27AB, Description = 60S ribosomal protein L27a-2, PFAM = PF00828)' T '29.2.1.2.2.535' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35A' 'niben044scf00024564ctg004_900-3532' '(at1g74270 : 189.0) Ribosomal protein L35Ae family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L35Ae (InterPro:IPR001780), Ribosomal protein L35Ae, conserved site (InterPro:IPR018266); BEST Arabidopsis thaliana protein match is: Ribosomal protein L35Ae family protein (TAIR:AT1G07070.1); Has 765 Blast hits to 765 proteins in 258 species: Archae - 25; Bacteria - 0; Metazoa - 322; Fungi - 147; Plants - 149; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|36105 : 156.0) no description available & (gnl|cdd|65072 : 116.0) no description available & (reliability: 378.0) & (original description: Putative RPL35AA, Description = 60S ribosomal protein L35a-1, PFAM = PF01247)' T '29.2.1.2.2.535' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35A' 'niben101scf05017_414738-417347' '(at1g74270 : 190.0) Ribosomal protein L35Ae family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L35Ae (InterPro:IPR001780), Ribosomal protein L35Ae, conserved site (InterPro:IPR018266); BEST Arabidopsis thaliana protein match is: Ribosomal protein L35Ae family protein (TAIR:AT1G07070.1); Has 765 Blast hits to 765 proteins in 258 species: Archae - 25; Bacteria - 0; Metazoa - 322; Fungi - 147; Plants - 149; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|36105 : 156.0) no description available & (gnl|cdd|65072 : 115.0) no description available & (reliability: 380.0) & (original description: Putative RPL35AA, Description = 60S ribosomal protein L35a-1, PFAM = PF01247)' T '29.2.1.2.2.536' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L36A' 'niben101scf00428_563962-571688' '(q96499|rl44_goshi : 132.0) 60S ribosomal protein L44 - Gossypium hirsutum (Upland cotton) & (at4g14320 : 131.0) Zinc-binding ribosomal protein family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L44e (InterPro:IPR000552), Ribosomal protein, zinc-binding domain (InterPro:IPR011332); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT3G23390.1). & (gnl|cdd|38674 : 111.0) no description available & (gnl|cdd|85135 : 84.2) no description available & (reliability: 262.0) & (original description: Putative RPL44, Description = 60S ribosomal protein L44, PFAM = PF00935)' T '29.2.1.2.2.536' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L36A' 'niben101scf01130_119549-121860' '(q96499|rl44_goshi : 132.0) 60S ribosomal protein L44 - Gossypium hirsutum (Upland cotton) & (at4g14320 : 130.0) Zinc-binding ribosomal protein family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L44e (InterPro:IPR000552), Ribosomal protein, zinc-binding domain (InterPro:IPR011332); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT3G23390.1). & (gnl|cdd|38674 : 102.0) no description available & (gnl|cdd|85135 : 82.3) no description available & (reliability: 260.0) & (original description: Putative RPL44, Description = 60S ribosomal protein L44, PFAM = PF00935)' T '29.2.1.2.2.536' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L36A' 'niben101scf05551_15472-18754' '(q96499|rl44_goshi : 137.0) 60S ribosomal protein L44 - Gossypium hirsutum (Upland cotton) & (at4g14320 : 135.0) Zinc-binding ribosomal protein family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L44e (InterPro:IPR000552), Ribosomal protein, zinc-binding domain (InterPro:IPR011332); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT3G23390.1). & (gnl|cdd|38674 : 116.0) no description available & (gnl|cdd|85135 : 88.1) no description available & (reliability: 270.0) & (original description: Putative RPL44, Description = 60S ribosomal protein L44, PFAM = PF00935)' T '29.2.1.2.2.537' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L37A' 'niben101scf01489_240614-244268' '(q5qm99|rl37a_orysa : 142.0) 60S ribosomal protein L37a - Oryza sativa (Rice) & (at3g10950 : 138.0) Zinc-binding ribosomal protein family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ribosomal protein, zinc-binding domain (InterPro:IPR011332), Ribosomal protein L37ae (InterPro:IPR002674), Ribosomal protein L37ae/L37e, N-terminal domain (InterPro:IPR011331); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT3G60245.1); Has 1048 Blast hits to 1048 proteins in 363 species: Archae - 286; Bacteria - 0; Metazoa - 326; Fungi - 120; Plants - 130; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink). & (gnl|cdd|35623 : 128.0) no description available & (gnl|cdd|85673 : 116.0) no description available & (reliability: 276.0) & (original description: Putative Os01g0679700, Description = 60S ribosomal protein L37a-1, PFAM = PF01780)' T '29.2.1.2.2.571' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A/NHP2/SNU13' '' '' '29.2.1.2.2.1730' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7/L30/S12' 'nbv0.3scaffold49062_7794-14461' '(at4g22380 : 177.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 170.0) no description available & (gnl|cdd|31549 : 98.8) no description available & (reliability: 354.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T '29.2.1.2.2.1730' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7/L30/S12' 'nbv0.5scaffold7788_43434-47582' '(at4g22380 : 182.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 172.0) no description available & (gnl|cdd|85334 : 96.8) no description available & (reliability: 364.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T '29.2.1.2.2.1730' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7/L30/S12' 'niben044scf00018148ctg007_2017-7607' '(at4g22380 : 187.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 176.0) no description available & (gnl|cdd|85334 : 96.4) no description available & (reliability: 374.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T '29.2.1.2.2.1730' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7/L30/S12' 'niben044scf00030449ctg004_3546-8237' '(at5g08180 : 172.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1). & (gnl|cdd|38377 : 153.0) no description available & (reliability: 344.0) & (original description: Putative nhp2, Description = H/ACA ribonucleoprotein complex subunit 2, PFAM = PF01248)' T '29.2.1.2.2.1730' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7/L30/S12' 'niben044scf00050988ctg002_979-7601' '(at4g22380 : 177.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 170.0) no description available & (gnl|cdd|31549 : 100.0) no description available & (reliability: 354.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T '29.2.1.2.2.1730' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7/L30/S12' 'niben101scf02632_381069-386959' '(at5g08180 : 183.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1). & (gnl|cdd|38377 : 152.0) no description available & (reliability: 366.0) & (original description: Putative nhp2, Description = H/ACA ribonucleoprotein complex subunit 2, PFAM = PF01248)' T '29.2.1.2.2.1730' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7/L30/S12' 'niben101scf03147_712098-717944' '(at4g22380 : 182.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 168.0) no description available & (gnl|cdd|31549 : 98.8) no description available & (reliability: 364.0) & (original description: Putative hmg2, Description = NHP2-like protein 1, PFAM = PF01248)' T '29.2.1.2.2.1730' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7/L30/S12' 'niben101scf03738_374285-382459' '(at4g22380 : 182.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 172.0) no description available & (gnl|cdd|85334 : 96.0) no description available & (reliability: 364.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T '29.2.1.2.2.1730' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7/L30/S12' 'niben101scf05708_9686-16304' '(at4g22380 : 148.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 145.0) no description available & (gnl|cdd|31549 : 83.4) no description available & (reliability: 296.0) & (original description: Putative hmg2, Description = NHP2-like protein 1, PFAM = PF01248)' T '29.2.1.99' 'protein.synthesis.ribosomal protein.unknown' '' '' '29.2.1.99.1' 'protein.synthesis.ribosomal protein.unknown.small subunit' '' '' '29.2.1.99.1.1' 'protein.synthesis.ribosomal protein.unknown.small subunit.S1' '' '' '29.2.1.99.1.2' 'protein.synthesis.ribosomal protein.unknown.small subunit.S2' '' '' '29.2.1.99.1.4' 'protein.synthesis.ribosomal protein.unknown.small subunit.S4' 'niben044scf00009154ctg002_1751-4358' '(at5g15750 : 281.0) Alpha-L RNA-binding motif/Ribosomal protein S4 family protein; FUNCTIONS IN: RNA binding, rRNA binding; LOCATED IN: cytosolic small ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912), RNA-binding S4 (InterPro:IPR002942); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39854 : 253.0) no description available & (gnl|cdd|30868 : 80.0) no description available & (reliability: 562.0) & (original description: Putative imp3, Description = IMP3, U3 small nucleolar ribonucleoprotein, homolog, PFAM = PF01479;PF00163)' T '29.2.1.99.1.4' 'protein.synthesis.ribosomal protein.unknown.small subunit.S4' 'niben101scf06560_312799-316405' '(at5g15750 : 285.0) Alpha-L RNA-binding motif/Ribosomal protein S4 family protein; FUNCTIONS IN: RNA binding, rRNA binding; LOCATED IN: cytosolic small ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912), RNA-binding S4 (InterPro:IPR002942); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39854 : 256.0) no description available & (gnl|cdd|30868 : 81.9) no description available & (reliability: 570.0) & (original description: Putative imp3, Description = IMP3, U3 small nucleolar ribonucleoprotein, homolog, PFAM = PF01479;PF00163)' T '29.2.1.99.1.5' 'protein.synthesis.ribosomal protein.unknown.small subunit.S5' '' '' '29.2.1.99.1.6' 'protein.synthesis.ribosomal protein.unknown.small subunit.S6' '' '' '29.2.1.99.1.7' 'protein.synthesis.ribosomal protein.unknown.small subunit.S7' '' '' '29.2.1.99.1.9' 'protein.synthesis.ribosomal protein.unknown.small subunit.S9' 'nbv0.3scaffold22654_2929-9951' '(at3g49080 : 326.0) Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S9 (InterPro:IPR000754), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S9, conserved site (InterPro:IPR020574), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: ribosomal protein S9 (TAIR:AT1G74970.1); Has 8295 Blast hits to 8282 proteins in 2846 species: Archae - 200; Bacteria - 5387; Metazoa - 167; Fungi - 129; Plants - 162; Viruses - 18; Other Eukaryotes - 2232 (source: NCBI BLink). & (gnl|cdd|36910 : 192.0) no description available & (gnl|cdd|80536 : 188.0) no description available & (p82278|rr9_spiol : 105.0) 30S ribosomal protein S9, chloroplast precursor (Fragment) - Spinacia oleracea (Spinach) & (reliability: 652.0) & (original description: Putative rpsI, Description = 30S ribosomal protein S9, PFAM = PF00380)' T '29.2.1.99.1.9' 'protein.synthesis.ribosomal protein.unknown.small subunit.S9' 'niben101scf00363_45020-53489' '(at3g49080 : 323.0) Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S9 (InterPro:IPR000754), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S9, conserved site (InterPro:IPR020574), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: ribosomal protein S9 (TAIR:AT1G74970.1); Has 8295 Blast hits to 8282 proteins in 2846 species: Archae - 200; Bacteria - 5387; Metazoa - 167; Fungi - 129; Plants - 162; Viruses - 18; Other Eukaryotes - 2232 (source: NCBI BLink). & (gnl|cdd|36910 : 191.0) no description available & (gnl|cdd|80536 : 188.0) no description available & (p82278|rr9_spiol : 104.0) 30S ribosomal protein S9, chloroplast precursor (Fragment) - Spinacia oleracea (Spinach) & (reliability: 646.0) & (original description: Putative rpsI, Description = 30S ribosomal protein S9, PFAM = PF00380)' T '29.2.1.99.1.18' 'protein.synthesis.ribosomal protein.unknown.small subunit.S18' '' '' '29.2.1.99.1.19' 'protein.synthesis.ribosomal protein.unknown.small subunit.S19' '' '' '29.2.1.99.1.21' 'protein.synthesis.ribosomal protein.unknown.small subunit.S21' '' '' '29.2.1.99.1.25' 'protein.synthesis.ribosomal protein.unknown.small subunit.S25' '' '' '29.2.1.99.1.205' 'protein.synthesis.ribosomal protein.unknown.small subunit.S2/S5' '' '' '29.2.1.99.2' 'protein.synthesis.ribosomal protein.unknown.large subunit' '' '' '29.2.1.99.2.1' 'protein.synthesis.ribosomal protein.unknown.large subunit.L1' '' '' '29.2.1.99.2.2' 'protein.synthesis.ribosomal protein.unknown.large subunit.L2' '' '' '29.2.1.99.2.4' 'protein.synthesis.ribosomal protein.unknown.large subunit.L4' '' '' '29.2.1.99.2.5' 'protein.synthesis.ribosomal protein.unknown.large subunit.L5' '' '' '29.2.1.99.2.16' 'protein.synthesis.ribosomal protein.unknown.large subunit.L16' '' '' '29.2.1.99.2.18' 'protein.synthesis.ribosomal protein.unknown.large subunit.L18' 'nbv0.3scaffold94352_1-3581' '(at1g14205 : 181.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT1G48350.1); Has 2486 Blast hits to 2465 proteins in 979 species: Archae - 0; Bacteria - 1979; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative BnaC08g39820D, Description = BnaC08g39820D protein, PFAM = PF00861)' T '29.2.1.99.2.18' 'protein.synthesis.ribosomal protein.unknown.large subunit.L18' 'niben101scf04082_206354-210227' '(at1g14205 : 192.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT1G48350.1); Has 2486 Blast hits to 2465 proteins in 979 species: Archae - 0; Bacteria - 1979; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 404 (source: NCBI BLink). & (gnl|cdd|81652 : 83.7) no description available & (reliability: 384.0) & (original description: Putative BnaC08g39820D, Description = BnaC08g39820D protein, PFAM = PF00861)' T '29.2.1.99.2.18' 'protein.synthesis.ribosomal protein.unknown.large subunit.L18' 'niben101scf04082_232119-236012' '(at1g14205 : 119.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT1G48350.1); Has 2486 Blast hits to 2465 proteins in 979 species: Archae - 0; Bacteria - 1979; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative At1g14205, Description = 50S ribosomal protein L18, chloroplast, putative, expressed, PFAM = PF00861)' T '29.2.1.99.2.19' 'protein.synthesis.ribosomal protein.unknown.large subunit.L19' '' '' '29.2.1.99.2.23' 'protein.synthesis.ribosomal protein.unknown.large subunit.L23' 'nbv0.3scaffold31141_13299-16083' '(at4g39880 : 182.0) Ribosomal protein L23/L15e family protein; FUNCTIONS IN: structural constituent of ribosome, nucleotide binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L23/L15e, core (InterPro:IPR012678), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein L25/L23 (InterPro:IPR013025); Has 3109 Blast hits to 3109 proteins in 1190 species: Archae - 0; Bacteria - 2436; Metazoa - 5; Fungi - 1; Plants - 57; Viruses - 0; Other Eukaryotes - 610 (source: NCBI BLink). & (gnl|cdd|39292 : 87.4) no description available & (reliability: 364.0) & (original description: Putative BnaC01g00750D, Description = BnaC01g00750D protein, PFAM = PF00276)' T '29.2.1.99.2.23' 'protein.synthesis.ribosomal protein.unknown.large subunit.L23' 'niben101scf00140_202072-204856' '(at4g39880 : 175.0) Ribosomal protein L23/L15e family protein; FUNCTIONS IN: structural constituent of ribosome, nucleotide binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L23/L15e, core (InterPro:IPR012678), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein L25/L23 (InterPro:IPR013025); Has 3109 Blast hits to 3109 proteins in 1190 species: Archae - 0; Bacteria - 2436; Metazoa - 5; Fungi - 1; Plants - 57; Viruses - 0; Other Eukaryotes - 610 (source: NCBI BLink). & (gnl|cdd|39292 : 84.3) no description available & (reliability: 350.0) & (original description: Putative BnaC01g00750D, Description = BnaC01g00750D protein, PFAM = PF00276)' T '29.2.1.99.2.23' 'protein.synthesis.ribosomal protein.unknown.large subunit.L23' 'niben101scf26477_7485-9180' '(at4g39880 : 81.6) Ribosomal protein L23/L15e family protein; FUNCTIONS IN: structural constituent of ribosome, nucleotide binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L23/L15e, core (InterPro:IPR012678), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein L25/L23 (InterPro:IPR013025); Has 3109 Blast hits to 3109 proteins in 1190 species: Archae - 0; Bacteria - 2436; Metazoa - 5; Fungi - 1; Plants - 57; Viruses - 0; Other Eukaryotes - 610 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative At4g39880, Description = Ribosomal protein L23/L15e family protein, PFAM = )' T '29.2.1.99.2.27' 'protein.synthesis.ribosomal protein.unknown.large subunit.L27' '' '' '29.2.1.99.2.34' 'protein.synthesis.ribosomal protein.unknown.large subunit.L34' '' '' '29.2.1.99.2.36' 'protein.synthesis.ribosomal protein.unknown.large subunit.L36' '' '' '29.2.1.99.2.39' 'protein.synthesis.ribosomal protein.unknown.large subunit.L39' '' '' '29.2.1.99.2.1185' 'protein.synthesis.ribosomal protein.unknown.large subunit.L18/L5' 'niben044scf00009533ctg008_21257-25883' '(at1g08845 : 276.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: endomembrane system, ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT3G20230.1); Has 251 Blast hits to 251 proteins in 55 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 0; Plants - 148; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 552.0) & (original description: Putative Heart Stopper, Description = L18 ribosomal protein Heart Stopper, PFAM = PF00861)' T '29.2.1.99.2.1185' 'protein.synthesis.ribosomal protein.unknown.large subunit.L18/L5' 'niben101scf00167_53617-56705' '(at3g22450 : 207.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, ribosome, intracellular; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT1G08845.1); Has 315 Blast hits to 315 proteins in 79 species: Archae - 0; Bacteria - 79; Metazoa - 42; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative At3g22450, Description = Expressed protein, PFAM = PF00861)' T '29.2.1.99.2.1185' 'protein.synthesis.ribosomal protein.unknown.large subunit.L18/L5' 'niben101scf04825_52525-57223' '(at1g08845 : 273.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: endomembrane system, ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT3G20230.1); Has 251 Blast hits to 251 proteins in 55 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 0; Plants - 148; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 546.0) & (original description: Putative Heart Stopper, Description = L18 ribosomal protein Heart Stopper, PFAM = PF00861)' T '29.2.1.99.99' 'protein.synthesis.ribosomal protein.unknown.unknown' 'nbv0.3scaffold542_86202-96574' '(at5g13720 : 165.0) Uncharacterised protein family (UPF0114); LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0114, plant (InterPro:IPR016804), Uncharacterised protein family UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0114) (TAIR:AT4G19390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86300 : 86.0) no description available & (reliability: 330.0) & (original description: Putative At5g13720, Description = Structural constituent of ribosome protein, PFAM = PF03350;PF03350)' T '29.2.1.99.99' 'protein.synthesis.ribosomal protein.unknown.unknown' 'nbv0.5scaffold962_376182-395461' '(at5g13720 : 292.0) Uncharacterised protein family (UPF0114); LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0114, plant (InterPro:IPR016804), Uncharacterised protein family UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0114) (TAIR:AT4G19390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86300 : 122.0) no description available & (reliability: 584.0) & (original description: Putative Sb10g029560, Description = Putative uncharacterized protein Sb10g029560, PFAM = PF03350)' T '29.2.1.99.99' 'protein.synthesis.ribosomal protein.unknown.unknown' 'niben044scf00008465ctg006_446-13067' '(at5g13720 : 291.0) Uncharacterised protein family (UPF0114); LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0114, plant (InterPro:IPR016804), Uncharacterised protein family UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0114) (TAIR:AT4G19390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86300 : 116.0) no description available & (reliability: 582.0) & (original description: Putative AY107414, Description = Structural constituent of ribosome protein, PFAM = PF03350)' T '29.2.1.99.99' 'protein.synthesis.ribosomal protein.unknown.unknown' 'niben044scf00008465ctg007_1496-6982' '(at5g13720 : 167.0) Uncharacterised protein family (UPF0114); LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0114, plant (InterPro:IPR016804), Uncharacterised protein family UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0114) (TAIR:AT4G19390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86300 : 93.7) no description available & (reliability: 334.0) & (original description: Putative LOC100192831, Description = Structural constituent of ribosome protein, PFAM = PF03350)' T '29.2.1.99.99' 'protein.synthesis.ribosomal protein.unknown.unknown' 'niben101scf00773_1547989-1556250' '(at3g56010 : 160.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 25 Blast hits to 25 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative PGSC0003DMG400027726, Description = BnaA04g03280D protein, PFAM = )' T '29.2.1.99.99' 'protein.synthesis.ribosomal protein.unknown.unknown' 'niben101scf00963_400915-403790' '(at1g54740 : 86.7) Protein of unknown function (DUF3049); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) (TAIR:AT5G22390.1); Has 534 Blast hits to 376 proteins in 66 species: Archae - 0; Bacteria - 26; Metazoa - 75; Fungi - 14; Plants - 157; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative glysoja_022708, Description = DUF3049 family protein, PFAM = PF11250)' T '29.2.1.99.99' 'protein.synthesis.ribosomal protein.unknown.unknown' 'niben101scf03253_98696-106023' '(at5g13720 : 290.0) Uncharacterised protein family (UPF0114); LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0114, plant (InterPro:IPR016804), Uncharacterised protein family UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0114) (TAIR:AT4G19390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86300 : 117.0) no description available & (reliability: 580.0) & (original description: Putative Sb02g041590, Description = Putative uncharacterized protein Sb02g041590, PFAM = PF03350)' T '29.2.1.99.99' 'protein.synthesis.ribosomal protein.unknown.unknown' 'niben101scf03253_100062-119341' '(at5g13720 : 261.0) Uncharacterised protein family (UPF0114); LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0114, plant (InterPro:IPR016804), Uncharacterised protein family UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0114) (TAIR:AT4G19390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86300 : 100.0) no description available & (reliability: 522.0) & (original description: Putative AY107414, Description = Structural constituent of ribosome protein, PFAM = PF03350)' T '29.2.1.99.99' 'protein.synthesis.ribosomal protein.unknown.unknown' 'niben101scf03779_13189-19788' '(at3g56010 : 157.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 25 Blast hits to 25 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative PGSC0003DMG400027726, Description = BnaA04g03280D protein, PFAM = )' T '29.2.1.99.99' 'protein.synthesis.ribosomal protein.unknown.unknown' 'niben101scf04939_323303-331412' '(at3g26360 : 97.1) Ribosomal protein S21 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21 (InterPro:IPR001911); Has 35 Blast hits to 35 proteins in 14 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative At3g26360, Description = Ribosomal protein S21 family protein, PFAM = PF01165)' T '29.2.2' 'protein.synthesis.ribosome biogenesis' 'nbv0.3scaffold816_26718-84806' '(at1g67120 : 4530.0) ATPases;nucleotide binding;ATP binding;nucleoside-triphosphatases;transcription factor binding; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, transcription factor binding, nucleotide binding, ATP binding; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of protein complex assembly; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Midasin (InterPro:IPR012099), ATPase, AAA-5 (InterPro:IPR011704), ATPase, AAA+ type, core (InterPro:IPR003593), von Willebrand factor, type A (InterPro:IPR002035), RNA polymerase sigma factor 54, interaction (InterPro:IPR002078); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34868 : 1481.0) no description available & (gnl|cdd|37019 : 617.0) no description available & (reliability: 9060.0) & (original description: Putative Ccrd_015790, Description = AAA+ ATPase domain-containing protein, PFAM = PF07728;PF07728;PF07728;PF07728;PF07728;PF07728;PF07728;PF07728)' T '29.2.2' 'protein.synthesis.ribosome biogenesis' 'nbv0.5scaffold1864_208539-213604' '(at3g22980 : 1447.0) Ribosomal protein S5/Elongation factor G/III/V family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT1G56070.1); Has 75542 Blast hits to 60298 proteins in 6538 species: Archae - 1481; Bacteria - 47710; Metazoa - 4520; Fungi - 3401; Plants - 1472; Viruses - 1; Other Eukaryotes - 16957 (source: NCBI BLink). & (gnl|cdd|35688 : 975.0) no description available & (o23755|ef2_betvu : 437.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (gnl|cdd|57968 : 318.0) no description available & (reliability: 2894.0) & (original description: Putative At3g22980, Description = Ribosomal protein S5/Elongation factor G/III/V family protein, PFAM = PF14492;PF03144;PF00009;PF00679)' T '29.2.2' 'protein.synthesis.ribosome biogenesis' 'niben044scf00011193ctg005_1-7079' '(at1g52980 : 743.0) GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917), NGP1, N-terminal (InterPro:IPR012971); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT3G07050.1); Has 37841 Blast hits to 9407 proteins in 1963 species: Archae - 139; Bacteria - 33291; Metazoa - 1149; Fungi - 897; Plants - 387; Viruses - 125; Other Eukaryotes - 1853 (source: NCBI BLink). & (gnl|cdd|37634 : 651.0) no description available & (gnl|cdd|57929 : 302.0) no description available & (reliability: 1486.0) & (original description: Putative NUG2, Description = Nuclear/nucleolar GTPase 2, PFAM = PF08153;PF01926)' T '29.2.2' 'protein.synthesis.ribosome biogenesis' 'niben044scf00015787ctg000_1-4866' '(at3g08720 : 500.0) Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.; Arabidopsis thaliana protein kinase 19 (ATPK19); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, C-terminal (InterPro:IPR017892), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: protein-serine kinase 1 (TAIR:AT3G08730.1); Has 133901 Blast hits to 131707 proteins in 4554 species: Archae - 204; Bacteria - 15943; Metazoa - 48718; Fungi - 13429; Plants - 32816; Viruses - 561; Other Eukaryotes - 22230 (source: NCBI BLink). & (gnl|cdd|35818 : 434.0) no description available & (gnl|cdd|29142 : 288.0) no description available & (q6x4a2|cipk1_orysa : 150.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1000.0) & (original description: Putative S6K1, Description = Ribosomal protein S6 kinase, PFAM = PF00069;PF00433)' T '29.2.2' 'protein.synthesis.ribosome biogenesis' 'niben044scf00030132ctg000_1-8302' '(at1g42440 : 914.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948), Protein of unknown function DUF663 (InterPro:IPR007034); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G06720.1); Has 2741 Blast hits to 2088 proteins in 291 species: Archae - 2; Bacteria - 131; Metazoa - 833; Fungi - 650; Plants - 171; Viruses - 49; Other Eukaryotes - 905 (source: NCBI BLink). & (gnl|cdd|37191 : 403.0) no description available & (gnl|cdd|34776 : 242.0) no description available & (reliability: 1828.0) & (original description: Putative At1g42440, Description = At1g42440/F7F22_7, PFAM = PF08142;PF04950)' T '29.2.2' 'protein.synthesis.ribosome biogenesis' 'niben101scf00006_279872-284845' '(at3g08720 : 493.0) Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.; Arabidopsis thaliana protein kinase 19 (ATPK19); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, C-terminal (InterPro:IPR017892), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: protein-serine kinase 1 (TAIR:AT3G08730.1); Has 133901 Blast hits to 131707 proteins in 4554 species: Archae - 204; Bacteria - 15943; Metazoa - 48718; Fungi - 13429; Plants - 32816; Viruses - 561; Other Eukaryotes - 22230 (source: NCBI BLink). & (gnl|cdd|35818 : 435.0) no description available & (gnl|cdd|29142 : 288.0) no description available & (q6x4a2|cipk1_orysa : 150.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 986.0) & (original description: Putative pk1, Description = S6 ribosomal protein kinase, PFAM = PF00069;PF00433)' T '29.2.2' 'protein.synthesis.ribosome biogenesis' 'niben101scf01157_326020-339739' '(at1g42440 : 1077.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948), Protein of unknown function DUF663 (InterPro:IPR007034); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G06720.1); Has 2741 Blast hits to 2088 proteins in 291 species: Archae - 2; Bacteria - 131; Metazoa - 833; Fungi - 650; Plants - 171; Viruses - 49; Other Eukaryotes - 905 (source: NCBI BLink). & (gnl|cdd|37191 : 516.0) no description available & (gnl|cdd|68521 : 346.0) no description available & (reliability: 2154.0) & (original description: Putative At1g42440, Description = At1g42440/F7F22_7, PFAM = PF04950;PF08142)' T '29.2.2' 'protein.synthesis.ribosome biogenesis' 'niben101scf01959_742936-751289' '(at1g52980 : 745.0) GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917), NGP1, N-terminal (InterPro:IPR012971); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT3G07050.1); Has 37841 Blast hits to 9407 proteins in 1963 species: Archae - 139; Bacteria - 33291; Metazoa - 1149; Fungi - 897; Plants - 387; Viruses - 125; Other Eukaryotes - 1853 (source: NCBI BLink). & (gnl|cdd|37634 : 663.0) no description available & (gnl|cdd|57929 : 304.0) no description available & (reliability: 1490.0) & (original description: Putative NUG2, Description = Nuclear/nucleolar GTPase 2, PFAM = PF08153;PF01926)' T '29.2.2' 'protein.synthesis.ribosome biogenesis' 'niben101scf02227_73124-90610' '(at3g53470 : 140.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35 Blast hits to 35 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative Sb07g024190, Description = Putative uncharacterized protein Sb07g024190, PFAM = )' T '29.2.2' 'protein.synthesis.ribosome biogenesis' 'niben101scf02318_148421-156227' '(at5g53920 : 324.0) ribosomal protein L11 methyltransferase-related; FUNCTIONS IN: protein methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11 methyltransferase (InterPro:IPR004498), Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|69826 : 269.0) no description available & (reliability: 648.0) & (original description: Putative prmA, Description = Ribosomal protein L11 methyltransferase, PFAM = PF06325)' T '29.2.2' 'protein.synthesis.ribosome biogenesis' 'niben101scf02381_564310-569580' '(at5g16140 : 328.0) Peptidyl-tRNA hydrolase family protein; FUNCTIONS IN: aminoacyl-tRNA hydrolase activity; INVOLVED IN: translation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-tRNA hydrolase, conserved site (InterPro:IPR018171), Peptidyl-tRNA hydrolase (InterPro:IPR001328); BEST Arabidopsis thaliana protein match is: Peptidyl-tRNA hydrolase family protein (TAIR:AT5G38290.2); Has 7903 Blast hits to 7899 proteins in 2585 species: Archae - 0; Bacteria - 5295; Metazoa - 47; Fungi - 77; Plants - 129; Viruses - 0; Other Eukaryotes - 2355 (source: NCBI BLink). & (gnl|cdd|48347 : 320.0) no description available & (gnl|cdd|37466 : 249.0) no description available & (reliability: 656.0) & (original description: Putative CRS2, Description = Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic, PFAM = PF01195)' T '29.2.2' 'protein.synthesis.ribosome biogenesis' 'niben101scf06565_325865-330646' '(at3g08720 : 593.0) Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.; Arabidopsis thaliana protein kinase 19 (ATPK19); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, C-terminal (InterPro:IPR017892), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: protein-serine kinase 1 (TAIR:AT3G08730.1); Has 133901 Blast hits to 131707 proteins in 4554 species: Archae - 204; Bacteria - 15943; Metazoa - 48718; Fungi - 13429; Plants - 32816; Viruses - 561; Other Eukaryotes - 22230 (source: NCBI BLink). & (gnl|cdd|35818 : 425.0) no description available & (gnl|cdd|29142 : 300.0) no description available & (q6x4a2|cipk1_orysa : 159.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1186.0) & (original description: Putative ATPK2, Description = Serine/threonine-protein kinase AtPK2/AtPK19, PFAM = PF00069;PF00433)' T '29.2.2' 'protein.synthesis.ribosome biogenesis' 'niben101scf07445_71454-77874' '(at3g22980 : 1454.0) Ribosomal protein S5/Elongation factor G/III/V family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT1G56070.1); Has 75542 Blast hits to 60298 proteins in 6538 species: Archae - 1481; Bacteria - 47710; Metazoa - 4520; Fungi - 3401; Plants - 1472; Viruses - 1; Other Eukaryotes - 16957 (source: NCBI BLink). & (gnl|cdd|35688 : 981.0) no description available & (o23755|ef2_betvu : 442.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (gnl|cdd|57968 : 319.0) no description available & (reliability: 2908.0) & (original description: Putative At3g22980, Description = Ribosomal protein S5/Elongation factor G/III/V family protein, PFAM = PF00009;PF03144;PF00679)' T '29.2.2' 'protein.synthesis.ribosome biogenesis' 'niben101scf08729_317257-319817' '(at4g15770 : 315.0) RNA binding; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome assembly, ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Ribosome biogenesis factor NIP7-like (InterPro:IPR005155), Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478), Ribosome biogenesis factor, NIP7 (InterPro:IPR016686); Has 438 Blast hits to 438 proteins in 213 species: Archae - 5; Bacteria - 0; Metazoa - 151; Fungi - 132; Plants - 49; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (gnl|cdd|38702 : 261.0) no description available & (gnl|cdd|31565 : 133.0) no description available & (reliability: 630.0) & (original description: Putative nip7, Description = 60S ribosome subunit biogenesis protein NIP7 homolog, PFAM = PF03657)' T '29.2.2' 'protein.synthesis.ribosome biogenesis' 'niben101scf16089_32791-37337' '(at3g08720 : 645.0) Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.; Arabidopsis thaliana protein kinase 19 (ATPK19); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, C-terminal (InterPro:IPR017892), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: protein-serine kinase 1 (TAIR:AT3G08730.1); Has 133901 Blast hits to 131707 proteins in 4554 species: Archae - 204; Bacteria - 15943; Metazoa - 48718; Fungi - 13429; Plants - 32816; Viruses - 561; Other Eukaryotes - 22230 (source: NCBI BLink). & (gnl|cdd|35818 : 444.0) no description available & (gnl|cdd|29142 : 298.0) no description available & (q6x4a2|cipk1_orysa : 160.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1290.0) & (original description: Putative ATPK2, Description = Serine/threonine-protein kinase AtPK2/AtPK19, PFAM = PF00069;PF00433)' T '29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'nbv0.3scaffold25269_22050-28711' '(at1g43860 : 499.0) sequence-specific DNA binding transcription factors; CONTAINS InterPro DOMAIN/s: Ribosome maturation protein SBDS, C-terminal (InterPro:IPR018978), Ribosome maturation protein SBDS (InterPro:IPR002140), Ribosome maturation protein SBDS, N-terminal (InterPro:IPR019783), Ribosome maturation protein SBDS, conserved site (InterPro:IPR018023); Has 1053 Blast hits to 1042 proteins in 349 species: Archae - 219; Bacteria - 2; Metazoa - 264; Fungi - 287; Plants - 65; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|38128 : 319.0) no description available & (gnl|cdd|31689 : 176.0) no description available & (reliability: 998.0) & (original description: Putative SBDS, Description = Ribosome maturation protein SBDS, PFAM = PF01172;PF09377)' T '29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'nbv0.3scaffold27637_634-10706' '(at3g51270 : 514.0) protein serine/threonine kinases;ATP binding;catalytics; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), RIO kinase (InterPro:IPR000687), RIO2 kinase, winged helix, N-terminal (InterPro:IPR015285), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT2G24990.1). & (gnl|cdd|37479 : 446.0) no description available & (gnl|cdd|88274 : 304.0) no description available & (reliability: 1028.0) & (original description: Putative Riok2, Description = Serine/threonine-protein kinase RIO2, PFAM = PF09202;PF01163)' T '29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'nbv0.3scaffold89362_1816-4707' '(at3g01610 : 155.0) AAA-type ATPase - Over 90% homologous to CDC48a; cell division cycle 48C (CDC48C); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 65227 Blast hits to 39412 proteins in 3299 species: Archae - 1912; Bacteria - 27659; Metazoa - 8516; Fungi - 6329; Plants - 5583; Viruses - 58; Other Eukaryotes - 15170 (source: NCBI BLink). & (gnl|cdd|35952 : 115.0) no description available & (gnl|cdd|81248 : 85.3) no description available & (q96372|cdc48_capan : 80.1) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 310.0) & (original description: Putative NVL, Description = Cell division control 48-C-like protein, PFAM = PF00004)' T '29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'nbv0.5scaffold1026_536758-542391' '(at5g60790 : 944.0) member of GCN subfamily; GENERAL CONTROL NON-REPRESSIBLE 1 (GCN1); FUNCTIONS IN: transporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: general control non-repressible 3 (TAIR:AT1G64550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36145 : 782.0) no description available & (gnl|cdd|30834 : 472.0) no description available & (reliability: 1888.0) & (original description: Putative ABCF1, Description = ABC transporter F family member 1, PFAM = PF12848;PF00005;PF00005)' T '29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'nbv0.5scaffold2109_257358-263352' '(at3g07050 : 585.0) GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917), GNL3L/Grn1 putative GTPase (InterPro:IPR014813); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT1G52980.1); Has 11622 Blast hits to 10428 proteins in 1861 species: Archae - 158; Bacteria - 5948; Metazoa - 1715; Fungi - 910; Plants - 502; Viruses - 28; Other Eukaryotes - 2361 (source: NCBI BLink). & (gnl|cdd|37695 : 431.0) no description available & (gnl|cdd|57931 : 274.0) no description available & (reliability: 1170.0) & (original description: Putative NSN1, Description = Guanine nucleotide-binding protein-like NSN1, PFAM = PF01926;PF08701)' T '29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'nbv0.5scaffold5198_65036-78986' '(at3g01610 : 738.0) AAA-type ATPase - Over 90% homologous to CDC48a; cell division cycle 48C (CDC48C); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 65227 Blast hits to 39412 proteins in 3299 species: Archae - 1912; Bacteria - 27659; Metazoa - 8516; Fungi - 6329; Plants - 5583; Viruses - 58; Other Eukaryotes - 15170 (source: NCBI BLink). & (gnl|cdd|35952 : 717.0) no description available & (p54774|cdc48_soybn : 466.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (gnl|cdd|30812 : 363.0) no description available & (reliability: 1476.0) & (original description: Putative CDC48C, Description = Cell division control protein 48 homolog C, PFAM = PF00004;PF00004)' T '29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'niben044scf00008319ctg000_3469-12446' '(at3g51270 : 508.0) protein serine/threonine kinases;ATP binding;catalytics; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), RIO kinase (InterPro:IPR000687), RIO2 kinase, winged helix, N-terminal (InterPro:IPR015285), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT2G24990.1). & (gnl|cdd|37479 : 437.0) no description available & (gnl|cdd|88274 : 298.0) no description available & (reliability: 1016.0) & (original description: Putative rio2, Description = Serine/threonine-protein kinase rio2, PFAM = PF01163;PF09202)' T '29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'niben044scf00009697ctg005_39129-47035' '(at3g01610 : 716.0) AAA-type ATPase - Over 90% homologous to CDC48a; cell division cycle 48C (CDC48C); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 65227 Blast hits to 39412 proteins in 3299 species: Archae - 1912; Bacteria - 27659; Metazoa - 8516; Fungi - 6329; Plants - 5583; Viruses - 58; Other Eukaryotes - 15170 (source: NCBI BLink). & (gnl|cdd|35952 : 711.0) no description available & (p54774|cdc48_soybn : 466.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (gnl|cdd|30812 : 362.0) no description available & (reliability: 1432.0) & (original description: Putative CDC48C, Description = Cell division control protein 48 homolog C, PFAM = PF00004;PF00004)' T '29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'niben044scf00039776ctg003_1-4210' '(at3g07050 : 584.0) GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917), GNL3L/Grn1 putative GTPase (InterPro:IPR014813); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT1G52980.1); Has 11622 Blast hits to 10428 proteins in 1861 species: Archae - 158; Bacteria - 5948; Metazoa - 1715; Fungi - 910; Plants - 502; Viruses - 28; Other Eukaryotes - 2361 (source: NCBI BLink). & (gnl|cdd|37695 : 366.0) no description available & (gnl|cdd|57931 : 284.0) no description available & (reliability: 1168.0) & (original description: Putative NSN1, Description = Guanine nucleotide-binding protein-like NSN1, PFAM = PF01926)' T '29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'niben101scf01502_26196-31556' '(at1g50920 : 900.0) Nucleolar GTP-binding protein; FUNCTIONS IN: GTP binding, nucleotide binding; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), Nucleolar GTP-binding 1 (InterPro:IPR010674), NOG, C-terminal (InterPro:IPR012973); BEST Arabidopsis thaliana protein match is: Nucleolar GTP-binding protein (TAIR:AT1G10300.1); Has 9379 Blast hits to 9179 proteins in 2035 species: Archae - 370; Bacteria - 5195; Metazoa - 1143; Fungi - 469; Plants - 325; Viruses - 0; Other Eukaryotes - 1877 (source: NCBI BLink). & (gnl|cdd|36703 : 782.0) no description available & (gnl|cdd|31281 : 367.0) no description available & (reliability: 1800.0) & (original description: Putative nog1, Description = Nucleolar GTP-binding protein 1, PFAM = PF08155;PF06858)' T '29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'niben101scf03817_1109249-1118596' '(at1g08410 : 706.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G27200.1); Has 7267 Blast hits to 7158 proteins in 1932 species: Archae - 109; Bacteria - 4700; Metazoa - 622; Fungi - 502; Plants - 285; Viruses - 0; Other Eukaryotes - 1049 (source: NCBI BLink). & (gnl|cdd|36638 : 536.0) no description available & (gnl|cdd|31355 : 167.0) no description available & (reliability: 1282.0) & (original description: Putative lsg1, Description = Large subunit GTPase 1, PFAM = PF01926)' T '29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'niben101scf03872_238007-245118' '(at5g60790 : 925.0) member of GCN subfamily; GENERAL CONTROL NON-REPRESSIBLE 1 (GCN1); FUNCTIONS IN: transporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: general control non-repressible 3 (TAIR:AT1G64550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36145 : 803.0) no description available & (gnl|cdd|30834 : 469.0) no description available & (reliability: 1850.0) & (original description: Putative ABCF1, Description = ABC transporter F family member 1, PFAM = PF12848;PF00005;PF00005)' T '29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'niben101scf06570_545476-554409' '(at3g51270 : 507.0) protein serine/threonine kinases;ATP binding;catalytics; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), RIO kinase (InterPro:IPR000687), RIO2 kinase, winged helix, N-terminal (InterPro:IPR015285), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT2G24990.1). & (gnl|cdd|37479 : 445.0) no description available & (gnl|cdd|88274 : 298.0) no description available & (reliability: 1014.0) & (original description: Putative Riok2, Description = Serine/threonine-protein kinase RIO2, PFAM = PF09202;PF01163)' T '29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'niben101scf07474_73158-86314' '(at1g43860 : 501.0) sequence-specific DNA binding transcription factors; CONTAINS InterPro DOMAIN/s: Ribosome maturation protein SBDS, C-terminal (InterPro:IPR018978), Ribosome maturation protein SBDS (InterPro:IPR002140), Ribosome maturation protein SBDS, N-terminal (InterPro:IPR019783), Ribosome maturation protein SBDS, conserved site (InterPro:IPR018023); Has 1053 Blast hits to 1042 proteins in 349 species: Archae - 219; Bacteria - 2; Metazoa - 264; Fungi - 287; Plants - 65; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|38128 : 321.0) no description available & (gnl|cdd|31689 : 177.0) no description available & (reliability: 1002.0) & (original description: Putative SBDS, Description = Ribosome maturation protein SBDS, PFAM = PF01172;PF09377)' T '29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'niben101scf15836_403237-409001' '(at5g60790 : 940.0) member of GCN subfamily; GENERAL CONTROL NON-REPRESSIBLE 1 (GCN1); FUNCTIONS IN: transporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: general control non-repressible 3 (TAIR:AT1G64550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36145 : 793.0) no description available & (gnl|cdd|30834 : 472.0) no description available & (reliability: 1880.0) & (original description: Putative ABCF1, Description = ABC transporter F family member 1, PFAM = PF00005;PF00005;PF12848)' T '29.2.2.2' 'protein.synthesis.ribosome biogenesis.Assembly factors' '' '' '29.2.2.2.1' 'protein.synthesis.ribosome biogenesis.Assembly factors.DExD-box helicases' 'niben044scf00003354ctg002_15986-18404' '(at4g16630 : 122.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 91788 Blast hits to 67613 proteins in 3461 species: Archae - 858; Bacteria - 34733; Metazoa - 21444; Fungi - 9002; Plants - 4280; Viruses - 615; Other Eukaryotes - 20856 (source: NCBI BLink). & (gnl|cdd|35559 : 100.0) no description available & (reliability: 244.0) & (original description: Putative RH28, Description = DEAD-box ATP-dependent RNA helicase 28, PFAM = )' T '29.2.2.2.1' 'protein.synthesis.ribosome biogenesis.Assembly factors.DExD-box helicases' 'niben101scf02380_186017-193634' '(at5g05450 : 793.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G71370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35566 : 677.0) no description available & (gnl|cdd|30859 : 301.0) no description available & (p46942|db10_nicsy : 174.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1586.0) & (original description: Putative RH18, Description = DEAD-box ATP-dependent RNA helicase 18, PFAM = PF00271;PF13959;PF00270)' T '29.2.2.2.1' 'protein.synthesis.ribosome biogenesis.Assembly factors.DExD-box helicases' 'niben101scf03412_93839-100104' '(at5g05450 : 516.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G71370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35566 : 452.0) no description available & (gnl|cdd|30859 : 267.0) no description available & (p46942|db10_nicsy : 148.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1032.0) & (original description: Putative spb4, Description = ATP-dependent RNA helicase DDX55, PFAM = PF00270;PF00271)' T '29.2.2.2.1' 'protein.synthesis.ribosome biogenesis.Assembly factors.DExD-box helicases' 'niben101scf04350_286783-302719' '(at1g77030 : 953.0) hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DBP10CT (InterPro:IPR012541), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 42888 Blast hits to 42073 proteins in 3063 species: Archae - 831; Bacteria - 21864; Metazoa - 5973; Fungi - 4375; Plants - 2654; Viruses - 31; Other Eukaryotes - 7160 (source: NCBI BLink). & (gnl|cdd|35558 : 563.0) no description available & (gnl|cdd|30859 : 319.0) no description available & (p46942|db10_nicsy : 202.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1906.0) & (original description: Putative RH29, Description = Putative DEAD-box ATP-dependent RNA helicase 29, PFAM = PF08147;PF00270;PF00271)' T '29.2.2.2.1' 'protein.synthesis.ribosome biogenesis.Assembly factors.DExD-box helicases' 'niben101scf06218_540173-549972' '(at4g16630 : 717.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 91788 Blast hits to 67613 proteins in 3461 species: Archae - 858; Bacteria - 34733; Metazoa - 21444; Fungi - 9002; Plants - 4280; Viruses - 615; Other Eukaryotes - 20856 (source: NCBI BLink). & (gnl|cdd|35559 : 660.0) no description available & (gnl|cdd|30859 : 345.0) no description available & (p46942|db10_nicsy : 188.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1434.0) & (original description: Putative RH28, Description = DEAD-box ATP-dependent RNA helicase 28, PFAM = PF00270;PF00271)' T '29.2.2.2.1' 'protein.synthesis.ribosome biogenesis.Assembly factors.DExD-box helicases' 'niben101scf06218_542648-545066' '(at4g16630 : 121.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 91788 Blast hits to 67613 proteins in 3461 species: Archae - 858; Bacteria - 34733; Metazoa - 21444; Fungi - 9002; Plants - 4280; Viruses - 615; Other Eukaryotes - 20856 (source: NCBI BLink). & (gnl|cdd|35559 : 99.3) no description available & (reliability: 242.0) & (original description: Putative RH28, Description = DEAD-box ATP-dependent RNA helicase 28, PFAM = )' T '29.2.2.2.1' 'protein.synthesis.ribosome biogenesis.Assembly factors.DExD-box helicases' 'niben101scf08651_590448-600364' '(at2g40700 : 758.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 40440 Blast hits to 37904 proteins in 2977 species: Archae - 739; Bacteria - 19708; Metazoa - 6217; Fungi - 4486; Plants - 2481; Viruses - 5; Other Eukaryotes - 6804 (source: NCBI BLink). & (gnl|cdd|35569 : 643.0) no description available & (gnl|cdd|30859 : 272.0) no description available & (p46942|db10_nicsy : 158.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1516.0) & (original description: Putative RH17, Description = DEAD-box ATP-dependent RNA helicase 17, PFAM = PF00271;PF00270;PF13959)' T '29.2.2.2.1' 'protein.synthesis.ribosome biogenesis.Assembly factors.DExD-box helicases' 'niben101scf10810_41202-48643' '(at2g40700 : 758.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 40440 Blast hits to 37904 proteins in 2977 species: Archae - 739; Bacteria - 19708; Metazoa - 6217; Fungi - 4486; Plants - 2481; Viruses - 5; Other Eukaryotes - 6804 (source: NCBI BLink). & (gnl|cdd|35569 : 636.0) no description available & (gnl|cdd|30859 : 267.0) no description available & (p46942|db10_nicsy : 159.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1516.0) & (original description: Putative RH17, Description = DEAD-box ATP-dependent RNA helicase 17, PFAM = PF00271;PF00270;PF13959)' T '29.2.2.2.2' 'protein.synthesis.ribosome biogenesis.Assembly factors.GTPases' 'niben044scf00002993ctg011_5864-9958' '(gnl|cdd|57965 : 388.0) no description available & (at1g06720 : 361.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Protein of unknown function DUF663 (InterPro:IPR007034); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G42440.1); Has 8329 Blast hits to 5822 proteins in 470 species: Archae - 49; Bacteria - 737; Metazoa - 2493; Fungi - 1253; Plants - 549; Viruses - 77; Other Eukaryotes - 3171 (source: NCBI BLink). & (reliability: 722.0) & (original description: Putative bms1, Description = Ribosome biogenesis protein bms1, PFAM = PF08142)' T '29.2.2.2.2' 'protein.synthesis.ribosome biogenesis.Assembly factors.GTPases' 'niben044scf00002993ctg012_1-10909' '(at1g06720 : 685.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Protein of unknown function DUF663 (InterPro:IPR007034); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G42440.1); Has 8329 Blast hits to 5822 proteins in 470 species: Archae - 49; Bacteria - 737; Metazoa - 2493; Fungi - 1253; Plants - 549; Viruses - 77; Other Eukaryotes - 3171 (source: NCBI BLink). & (gnl|cdd|34791 : 418.0) no description available & (gnl|cdd|37191 : 101.0) no description available & (reliability: 1370.0) & (original description: Putative BMS1, Description = Ribosome biogenesis protein BMS1-like protein, PFAM = PF04950)' T '29.2.2.2.2' 'protein.synthesis.ribosome biogenesis.Assembly factors.GTPases' 'niben101scf01534_373567-390670' '(at1g06720 : 1176.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Protein of unknown function DUF663 (InterPro:IPR007034); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G42440.1); Has 8329 Blast hits to 5822 proteins in 470 species: Archae - 49; Bacteria - 737; Metazoa - 2493; Fungi - 1253; Plants - 549; Viruses - 77; Other Eukaryotes - 3171 (source: NCBI BLink). & (gnl|cdd|34791 : 727.0) no description available & (gnl|cdd|37191 : 102.0) no description available & (reliability: 2352.0) & (original description: Putative bms1, Description = Bms1l protein, PFAM = PF08142;PF04950)' T '29.2.2.2.3' 'protein.synthesis.ribosome biogenesis.Assembly factors.WD-repeat proteins' '' '' '29.2.2.2.99' 'protein.synthesis.ribosome biogenesis.Assembly factors.misc' 'nbv0.3scaffold39596_12503-18797' '(at5g57120 : 99.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 101969 Blast hits to 55488 proteins in 2506 species: Archae - 424; Bacteria - 13843; Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses - 569; Other Eukaryotes - 34792 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative nolc1, Description = AT5g57120/MUL3_6, PFAM = PF05022)' T '29.2.2.2.99' 'protein.synthesis.ribosome biogenesis.Assembly factors.misc' 'nbv0.5scaffold4858_43846-50140' '(at5g57120 : 101.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 101969 Blast hits to 55488 proteins in 2506 species: Archae - 424; Bacteria - 13843; Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses - 569; Other Eukaryotes - 34792 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative nolc1, Description = AT5g57120/MUL3_6, PFAM = PF05022)' T '29.2.2.2.99' 'protein.synthesis.ribosome biogenesis.Assembly factors.misc' 'niben101scf04852_149179-155627' '(at5g57120 : 98.6) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 101969 Blast hits to 55488 proteins in 2506 species: Archae - 424; Bacteria - 13843; Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses - 569; Other Eukaryotes - 34792 (source: NCBI BLink). & (reliability: 197.2) & (original description: Putative nolc1, Description = AT5g57120/MUL3_6, PFAM = PF05022)' T '29.2.2.2.99' 'protein.synthesis.ribosome biogenesis.Assembly factors.misc' 'niben101scf10798_4667-11275' '(at5g57120 : 99.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 101969 Blast hits to 55488 proteins in 2506 species: Archae - 424; Bacteria - 13843; Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses - 569; Other Eukaryotes - 34792 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative nolc1, Description = Nucleolar and coiled-body phosphoprotein 1, PFAM = PF05022)' T '29.2.2.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications' '' '' '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'nbv0.3scaffold800_54557-85708' '(at3g06530 : 796.0) ARM repeat superfamily protein; CONTAINS InterPro DOMAIN/s: U3 small nucleolar RNA-associated protein 10 (InterPro:IPR022125), BP28, C-terminal (InterPro:IPR012954), Armadillo-type fold (InterPro:IPR016024). & (gnl|cdd|37048 : 325.0) no description available & (gnl|cdd|87447 : 123.0) no description available & (reliability: 1592.0) & (original description: Putative Os04g0548300, Description = Os04g0548300 protein, PFAM = PF08146;PF12397)' T '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'nbv0.3scaffold36060_1-8831' '(at5g66540 : 358.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: cytosol, nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p (InterPro:IPR012173), Mpp10 protein (InterPro:IPR007151); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67615 : 245.0) no description available & (gnl|cdd|37811 : 236.0) no description available & (reliability: 716.0) & (original description: Putative RNP1, Description = U3 small nucleolar ribonucleoprotein protein MPP10, PFAM = PF04006)' T '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'nbv0.3scaffold49062_7794-14461' '(at4g22380 : 177.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 170.0) no description available & (gnl|cdd|31549 : 98.8) no description available & (reliability: 354.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'nbv0.5scaffold924_89412-112569' '(at3g06530 : 578.0) ARM repeat superfamily protein; CONTAINS InterPro DOMAIN/s: U3 small nucleolar RNA-associated protein 10 (InterPro:IPR022125), BP28, C-terminal (InterPro:IPR012954), Armadillo-type fold (InterPro:IPR016024). & (gnl|cdd|37048 : 251.0) no description available & (gnl|cdd|87447 : 123.0) no description available & (reliability: 1156.0) & (original description: Putative Os04g0548300, Description = Os04g0548300 protein, PFAM = PF08146)' T '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'nbv0.5scaffold958_13053-18791' '(at1g56110 : 729.0) NOP56-like protein; homolog of nucleolar protein NOP56 (NOP56); LOCATED IN: nucleolus, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOP5, N-terminal (InterPro:IPR012974), NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: NOP56-like pre RNA processing ribonucleoprotein (TAIR:AT3G12860.1); Has 24182 Blast hits to 12540 proteins in 912 species: Archae - 265; Bacteria - 1523; Metazoa - 8592; Fungi - 2628; Plants - 1300; Viruses - 179; Other Eukaryotes - 9695 (source: NCBI BLink). & (gnl|cdd|37784 : 663.0) no description available & (gnl|cdd|31687 : 327.0) no description available & (reliability: 1420.0) & (original description: Putative nop56, Description = Nucleolar protein 56, PFAM = PF08156;PF01798)' T '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'nbv0.5scaffold7788_43434-47582' '(at4g22380 : 182.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 172.0) no description available & (gnl|cdd|85334 : 96.8) no description available & (reliability: 364.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben044scf00005969ctg010_13456-18481' '(at1g56110 : 387.0) NOP56-like protein; homolog of nucleolar protein NOP56 (NOP56); LOCATED IN: nucleolus, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOP5, N-terminal (InterPro:IPR012974), NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: NOP56-like pre RNA processing ribonucleoprotein (TAIR:AT3G12860.1); Has 24182 Blast hits to 12540 proteins in 912 species: Archae - 265; Bacteria - 1523; Metazoa - 8592; Fungi - 2628; Plants - 1300; Viruses - 179; Other Eukaryotes - 9695 (source: NCBI BLink). & (gnl|cdd|37784 : 320.0) no description available & (gnl|cdd|31687 : 112.0) no description available & (reliability: 734.0) & (original description: Putative sik1, Description = Nucleolar protein 56, PFAM = PF08156;PF01798)' T '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben044scf00009748ctg019_2762-6561' '(at3g57150 : 449.0) Encodes a putative pseudouridine synthase (NAP57).; homologue of NAP57 (NAP57); FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification, RNA processing; LOCATED IN: cytosol, nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478), H/ACA ribonucleoprotein complex, subunit Cbf5 (InterPro:IPR004802), Pseudouridine synthase II, TruB, N-terminal (InterPro:IPR002501), Dyskerin-like (InterPro:IPR012960), Uncharacterised domain 2 (InterPro:IPR004521); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT5G14460.1); Has 114172 Blast hits to 55339 proteins in 3754 species: Archae - 551; Bacteria - 17094; Metazoa - 41477; Fungi - 11530; Plants - 5704; Viruses - 752; Other Eukaryotes - 37064 (source: NCBI BLink). & (gnl|cdd|30021 : 342.0) no description available & (gnl|cdd|37740 : 312.0) no description available & (reliability: 898.0) & (original description: Putative cbf5, Description = H/ACA ribonucleoprotein complex subunit 4, PFAM = PF01509;PF16198;PF08068)' T '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben044scf00018148ctg007_2017-7607' '(at4g22380 : 187.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 176.0) no description available & (gnl|cdd|85334 : 96.4) no description available & (reliability: 374.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben044scf00025698ctg010_4014-8264' '(gnl|cdd|67615 : 123.0) no description available & (gnl|cdd|37811 : 120.0) no description available & (at5g66540 : 111.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: cytosol, nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p (InterPro:IPR012173), Mpp10 protein (InterPro:IPR007151); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative RNP1, Description = U3 small nucleolar ribonucleoprotein protein MPP10, PFAM = PF04006)' T '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben044scf00030449ctg004_3546-8237' '(at5g08180 : 172.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1). & (gnl|cdd|38377 : 153.0) no description available & (reliability: 344.0) & (original description: Putative nhp2, Description = H/ACA ribonucleoprotein complex subunit 2, PFAM = PF01248)' T '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben044scf00048133ctg003_1-3549' '(at5g66540 : 187.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: cytosol, nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p (InterPro:IPR012173), Mpp10 protein (InterPro:IPR007151); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67615 : 123.0) no description available & (gnl|cdd|37811 : 119.0) no description available & (reliability: 374.0) & (original description: Putative RNP1, Description = U3 small nucleolar ribonucleoprotein protein MPP10, PFAM = PF04006)' T '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben044scf00050988ctg002_979-7601' '(at4g22380 : 177.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 170.0) no description available & (gnl|cdd|31549 : 100.0) no description available & (reliability: 354.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben101scf02015_171256-175733' '(at3g03920 : 162.0) H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein; FUNCTIONS IN: snoRNA binding, pseudouridine synthase activity, RNA binding; LOCATED IN: chloroplast thylakoid membrane, nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Gar1, eukaryote (InterPro:IPR021154), H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 (InterPro:IPR007504); BEST Arabidopsis thaliana protein match is: H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein (TAIR:AT5G18180.1); Has 27180 Blast hits to 8695 proteins in 812 species: Archae - 17; Bacteria - 4971; Metazoa - 11125; Fungi - 2086; Plants - 5744; Viruses - 428; Other Eukaryotes - 2809 (source: NCBI BLink). & (gnl|cdd|68001 : 158.0) no description available & (gnl|cdd|38472 : 109.0) no description available & (reliability: 324.0) & (original description: Putative gar1, Description = H/ACA ribonucleoprotein complex subunit 1, PFAM = PF04410)' T '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben101scf02632_381069-386959' '(at5g08180 : 183.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1). & (gnl|cdd|38377 : 152.0) no description available & (reliability: 366.0) & (original description: Putative nhp2, Description = H/ACA ribonucleoprotein complex subunit 2, PFAM = PF01248)' T '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben101scf03147_712098-717944' '(at4g22380 : 182.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 168.0) no description available & (gnl|cdd|31549 : 98.8) no description available & (reliability: 364.0) & (original description: Putative hmg2, Description = NHP2-like protein 1, PFAM = PF01248)' T '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben101scf03595_1577191-1583678' '(at3g18610 : 169.0) Encodes ATNUC-L2 (NUCLEOLIN LIKE 2).; nucleolin like 2 (NUC-L2); FUNCTIONS IN: nucleotide binding, nucleic acid binding; EXPRESSED IN: egg cell, cultured cell; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: nucleolin like 1 (TAIR:AT1G48920.1); Has 220619 Blast hits to 110675 proteins in 3421 species: Archae - 647; Bacteria - 30556; Metazoa - 92066; Fungi - 36057; Plants - 14337; Viruses - 1241; Other Eukaryotes - 45715 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative NNF1, Description = Tobacco nucleolin, PFAM = PF00076;PF00076)' T '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben101scf03738_374285-382459' '(at4g22380 : 182.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 172.0) no description available & (gnl|cdd|85334 : 96.0) no description available & (reliability: 364.0) & (original description: Putative snu13, Description = NHP2-like protein 1, PFAM = PF01248)' T '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben101scf04815_250749-256102' '(at1g56110 : 727.0) NOP56-like protein; homolog of nucleolar protein NOP56 (NOP56); LOCATED IN: nucleolus, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOP5, N-terminal (InterPro:IPR012974), NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: NOP56-like pre RNA processing ribonucleoprotein (TAIR:AT3G12860.1); Has 24182 Blast hits to 12540 proteins in 912 species: Archae - 265; Bacteria - 1523; Metazoa - 8592; Fungi - 2628; Plants - 1300; Viruses - 179; Other Eukaryotes - 9695 (source: NCBI BLink). & (gnl|cdd|37784 : 662.0) no description available & (gnl|cdd|31687 : 325.0) no description available & (reliability: 1428.0) & (original description: Putative nop56, Description = Nucleolar protein 56, PFAM = PF01798;PF08156)' T '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben101scf05708_9686-16304' '(at4g22380 : 148.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|38597 : 145.0) no description available & (gnl|cdd|31549 : 83.4) no description available & (reliability: 296.0) & (original description: Putative hmg2, Description = NHP2-like protein 1, PFAM = PF01248)' T '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben101scf08651_590448-600364' '(at2g40700 : 758.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 40440 Blast hits to 37904 proteins in 2977 species: Archae - 739; Bacteria - 19708; Metazoa - 6217; Fungi - 4486; Plants - 2481; Viruses - 5; Other Eukaryotes - 6804 (source: NCBI BLink). & (gnl|cdd|35569 : 643.0) no description available & (gnl|cdd|30859 : 272.0) no description available & (p46942|db10_nicsy : 158.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1516.0) & (original description: Putative RH17, Description = DEAD-box ATP-dependent RNA helicase 17, PFAM = PF00271;PF00270;PF13959)' T '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben101scf08706_65050-96609' '(at3g06530 : 1505.0) ARM repeat superfamily protein; CONTAINS InterPro DOMAIN/s: U3 small nucleolar RNA-associated protein 10 (InterPro:IPR022125), BP28, C-terminal (InterPro:IPR012954), Armadillo-type fold (InterPro:IPR016024). & (gnl|cdd|37048 : 335.0) no description available & (gnl|cdd|87447 : 124.0) no description available & (reliability: 3010.0) & (original description: Putative Os04g0548300, Description = Os04g0548300 protein, PFAM = PF12397;PF08146)' T '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben101scf10810_41202-48643' '(at2g40700 : 758.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 40440 Blast hits to 37904 proteins in 2977 species: Archae - 739; Bacteria - 19708; Metazoa - 6217; Fungi - 4486; Plants - 2481; Viruses - 5; Other Eukaryotes - 6804 (source: NCBI BLink). & (gnl|cdd|35569 : 636.0) no description available & (gnl|cdd|30859 : 267.0) no description available & (p46942|db10_nicsy : 159.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1516.0) & (original description: Putative RH17, Description = DEAD-box ATP-dependent RNA helicase 17, PFAM = PF00271;PF00270;PF13959)' T '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben101scf12318_87702-92764' '(at3g03920 : 167.0) H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein; FUNCTIONS IN: snoRNA binding, pseudouridine synthase activity, RNA binding; LOCATED IN: chloroplast thylakoid membrane, nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Gar1, eukaryote (InterPro:IPR021154), H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 (InterPro:IPR007504); BEST Arabidopsis thaliana protein match is: H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein (TAIR:AT5G18180.1); Has 27180 Blast hits to 8695 proteins in 812 species: Archae - 17; Bacteria - 4971; Metazoa - 11125; Fungi - 2086; Plants - 5744; Viruses - 428; Other Eukaryotes - 2809 (source: NCBI BLink). & (gnl|cdd|68001 : 161.0) no description available & (gnl|cdd|38472 : 105.0) no description available & (reliability: 334.0) & (original description: Putative gar1, Description = H/ACA ribonucleoprotein complex subunit 1, PFAM = PF04410)' T '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben101scf13167_72040-75713' '(at3g57150 : 699.0) Encodes a putative pseudouridine synthase (NAP57).; homologue of NAP57 (NAP57); FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification, RNA processing; LOCATED IN: cytosol, nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478), H/ACA ribonucleoprotein complex, subunit Cbf5 (InterPro:IPR004802), Pseudouridine synthase II, TruB, N-terminal (InterPro:IPR002501), Dyskerin-like (InterPro:IPR012960), Uncharacterised domain 2 (InterPro:IPR004521); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT5G14460.1); Has 114172 Blast hits to 55339 proteins in 3754 species: Archae - 551; Bacteria - 17094; Metazoa - 41477; Fungi - 11530; Plants - 5704; Viruses - 752; Other Eukaryotes - 37064 (source: NCBI BLink). & (gnl|cdd|37740 : 472.0) no description available & (gnl|cdd|81343 : 346.0) no description available & (reliability: 1398.0) & (original description: Putative CBF5, Description = H/ACA ribonucleoprotein complex subunit 4, PFAM = PF01472;PF16198;PF01509;PF08068)' T '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'niben101scf33515_1838-7675' '(at3g05060 : 711.0) SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein; NOP56-like pre RNA processing ribonucleoprotein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOP5, N-terminal (InterPro:IPR012974), NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: NOP56-like pre RNA processing ribonucleoprotein (TAIR:AT5G27120.1); Has 39712 Blast hits to 18529 proteins in 1244 species: Archae - 275; Bacteria - 3520; Metazoa - 14574; Fungi - 4183; Plants - 1688; Viruses - 262; Other Eukaryotes - 15210 (source: NCBI BLink). & (gnl|cdd|37783 : 591.0) no description available & (gnl|cdd|31687 : 305.0) no description available & (reliability: 1422.0) & (original description: Putative NOP58, Description = Nucleolar protein 58, PFAM = PF01798;PF08156)' T '29.2.2.3.2' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNAs' '' '' '29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'nbv0.3scaffold55943_1909-8688' '(at5g10620 : 243.0) methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SPOUT methyltransferase, predicted (InterPro:IPR003742); BEST Arabidopsis thaliana protein match is: methyltransferases (TAIR:AT5G10605.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86040 : 159.0) no description available & (reliability: 486.0) & (original description: Putative At5g10620, Description = Putative RNA methyltransferase At5g10620, PFAM = PF02590)' T '29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'nbv0.3scaffold56873_9743-12855' '(at3g27180 : 128.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: rRNA methylation; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00095 (InterPro:IPR004398); Has 4717 Blast hits to 4707 proteins in 1568 species: Archae - 39; Bacteria - 4296; Metazoa - 92; Fungi - 26; Plants - 68; Viruses - 1; Other Eukaryotes - 195 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative BnaC07g24040D, Description = BnaC07g24040D protein, PFAM = )' T '29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'nbv0.3scaffold78133_3095-7536' '(at4g26600 : 267.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, RNA binding; INVOLVED IN: rRNA processing; LOCATED IN: nucleolus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678), Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site (InterPro:IPR018314), Nop2p (InterPro:IPR011023); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G55920.1); Has 64231 Blast hits to 30815 proteins in 2915 species: Archae - 495; Bacteria - 29426; Metazoa - 12322; Fungi - 6487; Plants - 2396; Viruses - 589; Other Eukaryotes - 12516 (source: NCBI BLink). & (gnl|cdd|36338 : 223.0) no description available & (gnl|cdd|30493 : 164.0) no description available & (reliability: 534.0) & (original description: Putative nop2, Description = Putative ribosomal RNA methyltransferase NOP2, PFAM = PF01189)' T '29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'nbv0.5scaffold2680_1-12470' '(at5g01230 : 535.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, rRNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA methyltransferase J (InterPro:IPR015507), Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877); BEST Arabidopsis thaliana protein match is: FtsJ-like methyltransferase family protein (TAIR:AT4G25730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36315 : 410.0) no description available & (gnl|cdd|30641 : 179.0) no description available & (reliability: 1070.0) & (original description: Putative FTSJ1, Description = Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase, PFAM = PF01728)' T '29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben044scf00004260ctg012_1-2250' '(at2g39670 : 166.0) Radical SAM superfamily protein; FUNCTIONS IN: iron-sulfur cluster binding, catalytic activity, RNA methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Ribosomal RNA large subunit methyltransferase RlmN; (InterPro:IPR004383), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: Radical SAM superfamily protein (TAIR:AT3G19630.1); Has 6992 Blast hits to 6986 proteins in 2311 species: Archae - 11; Bacteria - 5102; Metazoa - 1; Fungi - 1; Plants - 134; Viruses - 5; Other Eukaryotes - 1738 (source: NCBI BLink). & (gnl|cdd|31162 : 129.0) no description available & (reliability: 332.0) & (original description: Putative rlmN, Description = 23S rRNA (adenine(2503)-C(2))-methyltransferase, PFAM = PF04055)' T '29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben044scf00013355ctg000_13640-17091' '(at4g25730 : 226.0) FtsJ-like methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, rRNA processing, rRNA methylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Spb1, C-terminal (InterPro:IPR012920), Ribosomal RNA methyltransferase J (InterPro:IPR015507), Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G01230.1); Has 30028 Blast hits to 21157 proteins in 1975 species: Archae - 200; Bacteria - 7297; Metazoa - 8731; Fungi - 3085; Plants - 939; Viruses - 236; Other Eukaryotes - 9540 (source: NCBI BLink). & (gnl|cdd|36314 : 196.0) no description available & (gnl|cdd|71220 : 130.0) no description available & (reliability: 452.0) & (original description: Putative fsjC, Description = 2'-O-ribose RNA methyltransferase SPB1 homolog, PFAM = PF07780)' T '29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben044scf00013355ctg001_1-6973' '(at4g25730 : 499.0) FtsJ-like methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, rRNA processing, rRNA methylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Spb1, C-terminal (InterPro:IPR012920), Ribosomal RNA methyltransferase J (InterPro:IPR015507), Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G01230.1); Has 30028 Blast hits to 21157 proteins in 1975 species: Archae - 200; Bacteria - 7297; Metazoa - 8731; Fungi - 3085; Plants - 939; Viruses - 236; Other Eukaryotes - 9540 (source: NCBI BLink). & (gnl|cdd|36314 : 399.0) no description available & (gnl|cdd|30641 : 199.0) no description available & (reliability: 998.0) & (original description: Putative fsjC, Description = 2'-O-ribose RNA methyltransferase, PFAM = PF01728;PF11861)' T '29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben044scf00018787ctg009_2-2717' '(at2g39670 : 227.0) Radical SAM superfamily protein; FUNCTIONS IN: iron-sulfur cluster binding, catalytic activity, RNA methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Ribosomal RNA large subunit methyltransferase RlmN; (InterPro:IPR004383), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: Radical SAM superfamily protein (TAIR:AT3G19630.1); Has 6992 Blast hits to 6986 proteins in 2311 species: Archae - 11; Bacteria - 5102; Metazoa - 1; Fungi - 1; Plants - 134; Viruses - 5; Other Eukaryotes - 1738 (source: NCBI BLink). & (gnl|cdd|31162 : 159.0) no description available & (reliability: 454.0) & (original description: Putative rlmN, Description = 23S rRNA (adenine(2503)-C(2))-methyltransferase, PFAM = )' T '29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben044scf00044828ctg002_265-4731' '(at1g60230 : 439.0) Radical SAM superfamily protein; FUNCTIONS IN: iron-sulfur cluster binding, catalytic activity, RNA methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: cytoplasm; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Ribosomal RNA large subunit methyltransferase RlmN; (InterPro:IPR004383), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: Radical SAM superfamily protein (TAIR:AT3G19630.1); Has 6934 Blast hits to 6928 proteins in 2336 species: Archae - 3; Bacteria - 5075; Metazoa - 1; Fungi - 1; Plants - 140; Viruses - 5; Other Eukaryotes - 1709 (source: NCBI BLink). & (gnl|cdd|31162 : 281.0) no description available & (reliability: 878.0) & (original description: Putative rlmN, Description = Probable dual-specificity RNA methyltransferase RlmN, PFAM = PF13394;PF04055)' T '29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben044scf00061373ctg000_1-5504' '(gnl|cdd|36809 : 382.0) no description available & (at4g25630 : 380.0) encodes a fibrillarin, a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA, U60.2f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated.; fibrillarin 2 (FIB2); FUNCTIONS IN: snoRNA binding; INVOLVED IN: response to salt stress, RNA methylation, rRNA processing; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fibrillarin (InterPro:IPR000692); BEST Arabidopsis thaliana protein match is: fibrillarin 1 (TAIR:AT5G52470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85352 : 337.0) no description available & (reliability: 760.0) & (original description: Putative FIB3, Description = Putative rRNA 2'-O-methyltransferase fibrillarin 3, PFAM = PF01269)' T '29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf00046_144438-155903' '(at5g40530 : 339.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-related (InterPro:IPR007823); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38255 : 251.0) no description available & (gnl|cdd|86798 : 244.0) no description available & (reliability: 678.0) & (original description: Putative rrp8, Description = Ribosomal RNA-processing protein 8, PFAM = PF05148)' T '29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf00167_358664-368643' '(at3g27180 : 613.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: rRNA methylation; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00095 (InterPro:IPR004398); Has 4717 Blast hits to 4707 proteins in 1568 species: Archae - 39; Bacteria - 4296; Metazoa - 92; Fungi - 26; Plants - 68; Viruses - 1; Other Eukaryotes - 195 (source: NCBI BLink). & (gnl|cdd|32446 : 153.0) no description available & (reliability: 1226.0) & (original description: Putative Sb03g044000, Description = Putative uncharacterized protein Sb03g044000, PFAM = PF03602)' T '29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf00203_120806-127152' '(at1g60230 : 446.0) Radical SAM superfamily protein; FUNCTIONS IN: iron-sulfur cluster binding, catalytic activity, RNA methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: cytoplasm; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Ribosomal RNA large subunit methyltransferase RlmN; (InterPro:IPR004383), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: Radical SAM superfamily protein (TAIR:AT3G19630.1); Has 6934 Blast hits to 6928 proteins in 2336 species: Archae - 3; Bacteria - 5075; Metazoa - 1; Fungi - 1; Plants - 140; Viruses - 5; Other Eukaryotes - 1709 (source: NCBI BLink). & (gnl|cdd|31162 : 286.0) no description available & (reliability: 892.0) & (original description: Putative rlmN, Description = Probable dual-specificity RNA methyltransferase RlmN, PFAM = PF04055;PF13394)' T '29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf01155_530376-538073' '(at1g60230 : 579.0) Radical SAM superfamily protein; FUNCTIONS IN: iron-sulfur cluster binding, catalytic activity, RNA methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: cytoplasm; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Ribosomal RNA large subunit methyltransferase RlmN; (InterPro:IPR004383), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: Radical SAM superfamily protein (TAIR:AT3G19630.1); Has 6934 Blast hits to 6928 proteins in 2336 species: Archae - 3; Bacteria - 5075; Metazoa - 1; Fungi - 1; Plants - 140; Viruses - 5; Other Eukaryotes - 1709 (source: NCBI BLink). & (gnl|cdd|31162 : 321.0) no description available & (reliability: 1158.0) & (original description: Putative rlmN, Description = Dual-specificity RNA methyltransferase RlmN, PFAM = PF04055;PF13394)' T '29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf01982_150230-167191' '(at2g39670 : 544.0) Radical SAM superfamily protein; FUNCTIONS IN: iron-sulfur cluster binding, catalytic activity, RNA methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Ribosomal RNA large subunit methyltransferase RlmN; (InterPro:IPR004383), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: Radical SAM superfamily protein (TAIR:AT3G19630.1); Has 6992 Blast hits to 6986 proteins in 2311 species: Archae - 11; Bacteria - 5102; Metazoa - 1; Fungi - 1; Plants - 134; Viruses - 5; Other Eukaryotes - 1738 (source: NCBI BLink). & (gnl|cdd|31162 : 358.0) no description available & (reliability: 1088.0) & (original description: Putative rlmN, Description = Probable dual-specificity RNA methyltransferase RlmN, PFAM = PF04055)' T '29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf02444_161937-172162' '(at4g25730 : 721.0) FtsJ-like methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, rRNA processing, rRNA methylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Spb1, C-terminal (InterPro:IPR012920), Ribosomal RNA methyltransferase J (InterPro:IPR015507), Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G01230.1); Has 30028 Blast hits to 21157 proteins in 1975 species: Archae - 200; Bacteria - 7297; Metazoa - 8731; Fungi - 3085; Plants - 939; Viruses - 236; Other Eukaryotes - 9540 (source: NCBI BLink). & (gnl|cdd|36314 : 573.0) no description available & (gnl|cdd|30641 : 192.0) no description available & (reliability: 1442.0) & (original description: Putative SPB1, Description = AdoMet-dependent rRNA methyltransferase SPB1, PFAM = PF11861;PF07780;PF01728)' T '29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf02517_1752251-1776012' '(at2g39670 : 482.0) Radical SAM superfamily protein; FUNCTIONS IN: iron-sulfur cluster binding, catalytic activity, RNA methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Ribosomal RNA large subunit methyltransferase RlmN; (InterPro:IPR004383), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: Radical SAM superfamily protein (TAIR:AT3G19630.1); Has 6992 Blast hits to 6986 proteins in 2311 species: Archae - 11; Bacteria - 5102; Metazoa - 1; Fungi - 1; Plants - 134; Viruses - 5; Other Eukaryotes - 1738 (source: NCBI BLink). & (gnl|cdd|31162 : 320.0) no description available & (reliability: 964.0) & (original description: Putative rlmN, Description = Probable dual-specificity RNA methyltransferase RlmN, PFAM = PF04055)' T '29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf02533_37772-54878' '(at5g01230 : 578.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, rRNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA methyltransferase J (InterPro:IPR015507), Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877); BEST Arabidopsis thaliana protein match is: FtsJ-like methyltransferase family protein (TAIR:AT4G25730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36315 : 458.0) no description available & (gnl|cdd|30641 : 221.0) no description available & (reliability: 1156.0) & (original description: Putative FTSJ1, Description = Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase, PFAM = PF01728)' T '29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf02621_105780-113321' '(at1g50000 : 375.0) methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Ribosomal RNA small subunit methyltransferase E (InterPro:IPR006700); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86669 : 177.0) no description available & (reliability: 750.0) & (original description: Putative At1g50000, Description = Putative ribosomal RNA small subunit methyltransferase, PFAM = PF04452)' T '29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf03114_1006887-1012954' '(at4g25630 : 446.0) encodes a fibrillarin, a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA, U60.2f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated.; fibrillarin 2 (FIB2); FUNCTIONS IN: snoRNA binding; INVOLVED IN: response to salt stress, RNA methylation, rRNA processing; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fibrillarin (InterPro:IPR000692); BEST Arabidopsis thaliana protein match is: fibrillarin 1 (TAIR:AT5G52470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36809 : 440.0) no description available & (gnl|cdd|85352 : 392.0) no description available & (reliability: 892.0) & (original description: Putative MED36B, Description = Probable mediator of RNA polymerase II transcription subunit 36b, PFAM = PF01269)' T '29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf05183_131293-139200' '(at4g26600 : 605.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, RNA binding; INVOLVED IN: rRNA processing; LOCATED IN: nucleolus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678), Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site (InterPro:IPR018314), Nop2p (InterPro:IPR011023); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G55920.1); Has 64231 Blast hits to 30815 proteins in 2915 species: Archae - 495; Bacteria - 29426; Metazoa - 12322; Fungi - 6487; Plants - 2396; Viruses - 589; Other Eukaryotes - 12516 (source: NCBI BLink). & (gnl|cdd|36338 : 536.0) no description available & (gnl|cdd|30493 : 295.0) no description available & (reliability: 1210.0) & (original description: Putative Nop2, Description = Putative ribosomal RNA methyltransferase NOP2, PFAM = PF17125;PF01189)' T '29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf07564_192235-201303' '(at3g27180 : 680.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: rRNA methylation; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00095 (InterPro:IPR004398); Has 4717 Blast hits to 4707 proteins in 1568 species: Archae - 39; Bacteria - 4296; Metazoa - 92; Fungi - 26; Plants - 68; Viruses - 1; Other Eukaryotes - 195 (source: NCBI BLink). & (gnl|cdd|32446 : 153.0) no description available & (reliability: 1360.0) & (original description: Putative BnaC07g24040D, Description = BnaC07g24040D protein, PFAM = PF03602)' T '29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf09505_221381-226984' '(at3g19630 : 576.0) Radical SAM superfamily protein; FUNCTIONS IN: iron-sulfur cluster binding, catalytic activity, RNA methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA large subunit methyltransferase RlmN; (InterPro:IPR004383), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: Radical SAM superfamily protein (TAIR:AT1G60230.1); Has 6931 Blast hits to 6927 proteins in 2338 species: Archae - 5; Bacteria - 5129; Metazoa - 1; Fungi - 1; Plants - 138; Viruses - 3; Other Eukaryotes - 1654 (source: NCBI BLink). & (gnl|cdd|31162 : 299.0) no description available & (reliability: 1152.0) & (original description: Putative rlmN, Description = Ribosomal RNA large subunit methyltransferase N, PFAM = PF13394;PF04055)' T '29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf11090_69331-75430' '(at5g10620 : 241.0) methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SPOUT methyltransferase, predicted (InterPro:IPR003742); BEST Arabidopsis thaliana protein match is: methyltransferases (TAIR:AT5G10605.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86040 : 161.0) no description available & (reliability: 482.0) & (original description: Putative At5g10620, Description = Putative RNA methyltransferase At5g10620, PFAM = PF02590)' T '29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf11727_60733-66412' '(at3g28460 : 372.0) methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: rRNA methylation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00095 (InterPro:IPR004398); Has 4869 Blast hits to 4869 proteins in 1755 species: Archae - 2; Bacteria - 3296; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 1522 (source: NCBI BLink). & (gnl|cdd|86381 : 168.0) no description available & (reliability: 744.0) & (original description: Putative At3g28460, Description = Methyltransferase, PFAM = PF03602)' T '29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf12422_233492-239259' '(at5g50110 : 338.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: rRNA methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: rRNA small subunit methyltransferase G (InterPro:IPR003682); Has 6840 Blast hits to 6840 proteins in 2435 species: Archae - 0; Bacteria - 5096; Metazoa - 2; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 1704 (source: NCBI BLink). & (gnl|cdd|80517 : 200.0) no description available & (reliability: 676.0) & (original description: Putative gidB, Description = Ribosomal RNA small subunit methyltransferase G, PFAM = PF02527)' T '29.2.2.3.3' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases' 'niben101scf24482_1060-6703' '(at1g50000 : 371.0) methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Ribosomal RNA small subunit methyltransferase E (InterPro:IPR006700); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86669 : 173.0) no description available & (reliability: 742.0) & (original description: Putative At1g50000, Description = Putative ribosomal RNA small subunit methyltransferase, PFAM = PF04452)' T '29.2.2.3.4' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.WD-repeat proteins' 'nbv0.5scaffold106_641873-651906' '(at4g04940 : 1389.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: rRNA processing; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Small-subunit processome, Utp21 (InterPro:IPR007319), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G61210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36752 : 978.0) no description available & (gnl|cdd|67792 : 227.0) no description available & (reliability: 2778.0) & (original description: Putative BnaA03g25610D, Description = BnaA03g25610D protein, PFAM = PF12894;PF00400;PF04192)' T '29.2.2.3.4' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.WD-repeat proteins' 'nbv0.5scaffold6016_91475-107154' '(at5g16750 : 1173.0) Encodes a nucleolar localized WD-40 repeat protein that is preferentially expressed in dividing cells and is required for regulated division planes and embryo development.; TORMOZEMBRYO DEFECTIVE (TOZ); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Small-subunit processome, Utp13 (InterPro:IPR013934), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 153281 Blast hits to 38108 proteins in 953 species: Archae - 96; Bacteria - 13855; Metazoa - 64321; Fungi - 32637; Plants - 21715; Viruses - 0; Other Eukaryotes - 20657 (source: NCBI BLink). & (gnl|cdd|35540 : 856.0) no description available & (gnl|cdd|29257 : 199.0) no description available & (p93107|pf20_chlre : 90.9) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 2346.0) & (original description: Putative Sb06g027070, Description = Putative uncharacterized protein Sb06g027070, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF08625)' T '29.2.2.3.4' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.WD-repeat proteins' 'niben044scf00022155ctg004_1578-9986' '(at4g04940 : 1387.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: rRNA processing; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Small-subunit processome, Utp21 (InterPro:IPR007319), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G61210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36752 : 977.0) no description available & (gnl|cdd|67792 : 232.0) no description available & (reliability: 2774.0) & (original description: Putative BnaA03g25610D, Description = BnaA03g25610D protein, PFAM = PF12894;PF00400;PF04192)' T '29.2.2.3.4' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.WD-repeat proteins' 'niben101scf00457_258376-269850' '(at3g21540 : 1150.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: nucleolus, heterotrimeric G-protein complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Small-subunit processome, Utp12 (InterPro:IPR007148), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT5G16750.1); Has 119158 Blast hits to 33008 proteins in 859 species: Archae - 80; Bacteria - 11912; Metazoa - 49564; Fungi - 26721; Plants - 15098; Viruses - 0; Other Eukaryotes - 15783 (source: NCBI BLink). & (gnl|cdd|35527 : 749.0) no description available & (gnl|cdd|29257 : 193.0) no description available & (p93107|pf20_chlre : 92.4) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 2300.0) & (original description: Putative UTP12, Description = U3 small nucleolar RNA-associated protein 12, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF04003)' T '29.2.2.3.4' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.WD-repeat proteins' 'niben101scf00883_656880-660455' '(at5g14050 : 595.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 6115 Blast hits to 4690 proteins in 400 species: Archae - 26; Bacteria - 2036; Metazoa - 1593; Fungi - 1149; Plants - 369; Viruses - 2; Other Eukaryotes - 940 (source: NCBI BLink). & (gnl|cdd|37266 : 511.0) no description available & (gnl|cdd|29257 : 93.1) no description available & (reliability: 1190.0) & (original description: Putative At5g14050, Description = U3 small nucleolar RNA-associated protein 18 homolog, PFAM = PF00400;PF00400)' T '29.2.2.3.4' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.WD-repeat proteins' 'niben101scf01516_72504-83146' '(at4g04940 : 1367.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: rRNA processing; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Small-subunit processome, Utp21 (InterPro:IPR007319), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G61210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36752 : 960.0) no description available & (gnl|cdd|67792 : 227.0) no description available & (reliability: 2734.0) & (original description: Putative BnaA03g25610D, Description = BnaA03g25610D protein, PFAM = PF12894;PF00400;PF04192)' T '29.2.2.3.4' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.WD-repeat proteins' 'niben101scf01970_113931-125291' '(at2g40360 : 905.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: rRNA processing; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), BOP1, N-terminal (InterPro:IPR012953), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: HEAT repeat ;WD domain, G-beta repeat protein protein (TAIR:AT5G01770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35869 : 766.0) no description available & (gnl|cdd|87446 : 320.0) no description available & (reliability: 1810.0) & (original description: Putative bop1, Description = Ribosome biogenesis protein bop1, PFAM = PF08145;PF00400;PF00400;PF00400)' T '29.2.2.3.4' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.WD-repeat proteins' 'niben101scf04260_410645-414303' '(at5g14050 : 618.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 6115 Blast hits to 4690 proteins in 400 species: Archae - 26; Bacteria - 2036; Metazoa - 1593; Fungi - 1149; Plants - 369; Viruses - 2; Other Eukaryotes - 940 (source: NCBI BLink). & (gnl|cdd|37266 : 520.0) no description available & (gnl|cdd|29257 : 95.4) no description available & (reliability: 1236.0) & (original description: Putative At5g14050, Description = U3 small nucleolar RNA-associated protein 18 homolog, PFAM = PF00400;PF00400;PF00400)' T '29.2.2.3.4' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.WD-repeat proteins' 'niben101scf19480_1-3024' '(at2g47990 : 598.0) Encodes a transducin family nucleolar protein with six WD40 repeats that is most likely involved in 18S rRNA biogenesis. The slow progression of the gametophytic division cycles in swa1 suggested that the SWA1 protein is required for the normal progression of mitotic division cycles through the regulation of cell metabolism. Ubiquitously expressed throughout the plant.; SLOW WALKER1 (SWA1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), U3 small nucleolar RNA-associated protein 15, C-terminal (InterPro:IPR018983), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 33528 Blast hits to 20320 proteins in 654 species: Archae - 34; Bacteria - 4945; Metazoa - 12077; Fungi - 7782; Plants - 4404; Viruses - 6; Other Eukaryotes - 4280 (source: NCBI BLink). & (gnl|cdd|35531 : 514.0) no description available & (gnl|cdd|29257 : 150.0) no description available & (reliability: 1196.0) & (original description: Putative SWA1, Description = Protein SLOW WALKER 1, PFAM = PF09384;PF00400;PF00400;PF00400)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'nbv0.3scaffold53923_2456-9685' '(p41380|if4a3_nicpl : 490.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g19760 : 454.0) Encodes an RNA helicase that may be a component of the Exon Junction Complex. Subcellular localization is modulated by stress. Under normal conditions it is localized to the nuceloplasm but under hyopoxic conditions it localizes to the nucleolus and splicing speckles.; eukaryotic initiation factor 4A-III (EIF4A-III); FUNCTIONS IN: protein binding, ATP-dependent helicase activity; INVOLVED IN: mRNA processing, response to hypoxia; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G51380.1); Has 50040 Blast hits to 49280 proteins in 3163 species: Archae - 836; Bacteria - 27183; Metazoa - 6400; Fungi - 4843; Plants - 2693; Viruses - 42; Other Eukaryotes - 8043 (source: NCBI BLink). & (gnl|cdd|35549 : 454.0) no description available & (gnl|cdd|30859 : 266.0) no description available & (reliability: 908.0) & (original description: Putative FAL1, Description = ATP-dependent RNA helicase FAL1, PFAM = PF00271;PF00270)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'nbv0.5scaffold537_400855-427961' '(at2g06990 : 1553.0) encodes a putative DExH-box RNA helicase that acts redundantly with HEN1, HUA1, and HUA2 in the specification of floral organ identity in the third whorl.; hua enhancer 2 (HEN2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT1G59760.1); Has 9841 Blast hits to 8173 proteins in 1240 species: Archae - 753; Bacteria - 3176; Metazoa - 1197; Fungi - 1159; Plants - 489; Viruses - 32; Other Eukaryotes - 3035 (source: NCBI BLink). & (gnl|cdd|36166 : 1397.0) no description available & (gnl|cdd|34219 : 795.0) no description available & (reliability: 3106.0) & (original description: Putative HEN2, Description = DExH-box ATP-dependent RNA helicase DExH10, PFAM = PF00271;PF00270;PF08148;PF13234)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben044scf00007925ctg009_573-3919' '(gnl|cdd|35551 : 214.0) no description available & (at5g60990 : 203.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase 36 (TAIR:AT1G16280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30859 : 114.0) no description available & (reliability: 406.0) & (original description: Putative rrp3, Description = Putative ATP-dependent RNA helicase DDX47, PFAM = PF00271)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben044scf00008609ctg005_6805-17119' '(at4g34910 : 627.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 35246 Blast hits to 34671 proteins in 2939 species: Archae - 524; Bacteria - 16250; Metazoa - 5646; Fungi - 4238; Plants - 2336; Viruses - 4; Other Eukaryotes - 6248 (source: NCBI BLink). & (gnl|cdd|35567 : 612.0) no description available & (gnl|cdd|30859 : 267.0) no description available & (p46942|db10_nicsy : 144.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1254.0) & (original description: Putative RH16, Description = DEAD-box ATP-dependent RNA helicase 16, PFAM = PF00270;PF00271)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben044scf00013266ctg009_1-6647' '(at3g09720 : 389.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 47831 Blast hits to 47082 proteins in 3124 species: Archae - 967; Bacteria - 25249; Metazoa - 6167; Fungi - 4801; Plants - 2681; Viruses - 34; Other Eukaryotes - 7932 (source: NCBI BLink). & (gnl|cdd|35565 : 233.0) no description available & (gnl|cdd|28928 : 143.0) no description available & (p46942|db10_nicsy : 88.6) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 778.0) & (original description: Putative ddx52, Description = ATP-dependent RNA helicase ROK1, PFAM = PF00270)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben044scf00013266ctg010_1-2112' '(at3g09720 : 174.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 47831 Blast hits to 47082 proteins in 3124 species: Archae - 967; Bacteria - 25249; Metazoa - 6167; Fungi - 4801; Plants - 2681; Viruses - 34; Other Eukaryotes - 7932 (source: NCBI BLink). & (gnl|cdd|35565 : 165.0) no description available & (gnl|cdd|30859 : 97.9) no description available & (reliability: 348.0) & (original description: Putative ddx52, Description = Putative ATP-dependent RNA helicase DDX52, PFAM = PF00271)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben044scf00016386ctg005_1222-15634' '(at2g06990 : 1473.0) encodes a putative DExH-box RNA helicase that acts redundantly with HEN1, HUA1, and HUA2 in the specification of floral organ identity in the third whorl.; hua enhancer 2 (HEN2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT1G59760.1); Has 9841 Blast hits to 8173 proteins in 1240 species: Archae - 753; Bacteria - 3176; Metazoa - 1197; Fungi - 1159; Plants - 489; Viruses - 32; Other Eukaryotes - 3035 (source: NCBI BLink). & (gnl|cdd|36166 : 1369.0) no description available & (gnl|cdd|34219 : 781.0) no description available & (reliability: 2946.0) & (original description: Putative HEN2, Description = DExH-box ATP-dependent RNA helicase DExH10, PFAM = PF00270;PF13234;PF08148;PF00271)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben044scf00017009ctg002_1-4361' '(gnl|cdd|35551 : 233.0) no description available & (at5g60990 : 226.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase 36 (TAIR:AT1G16280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30859 : 116.0) no description available & (reliability: 452.0) & (original description: Putative rrp3, Description = Putative ATP-dependent RNA helicase DDX47, PFAM = PF00271)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben044scf00017009ctg004_1-2823' '(at5g60990 : 179.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase 36 (TAIR:AT1G16280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35551 : 179.0) no description available & (gnl|cdd|28928 : 135.0) no description available & (reliability: 358.0) & (original description: Putative rrp3, Description = ATP-dependent rRNA helicase RRP3, PFAM = PF00270)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben044scf00027865ctg000_1-3831' '(gnl|cdd|35551 : 116.0) no description available & (at5g60990 : 81.3) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase 36 (TAIR:AT1G16280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative rrp3, Description = Putative ATP-dependent RNA helicase DDX47, PFAM = )' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben044scf00028453ctg006_177-4976' '(at3g16840 : 147.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 60083 Blast hits to 51461 proteins in 3186 species: Archae - 589; Bacteria - 20345; Metazoa - 13239; Fungi - 7387; Plants - 3446; Viruses - 273; Other Eukaryotes - 14804 (source: NCBI BLink). & (gnl|cdd|28928 : 109.0) no description available & (gnl|cdd|35568 : 100.0) no description available & (reliability: 294.0) & (original description: Putative mak5, Description = DEAD-box ATP-dependent RNA helicase 13, PFAM = PF00270)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben044scf00053439ctg000_1-1255' '(at3g18600 : 149.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 44310 Blast hits to 43105 proteins in 3082 species: Archae - 753; Bacteria - 22440; Metazoa - 6214; Fungi - 4682; Plants - 2500; Viruses - 12; Other Eukaryotes - 7709 (source: NCBI BLink). & (gnl|cdd|35563 : 140.0) no description available & (gnl|cdd|28928 : 110.0) no description available & (reliability: 284.0) & (original description: Putative has1, Description = ATP-dependent RNA helicase HAS1, PFAM = PF00270)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf00663_263766-284709' '(at1g17690 : 727.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Digestive organ expansion factor, predicted (InterPro:IPR010678); Has 25006 Blast hits to 13379 proteins in 904 species: Archae - 102; Bacteria - 5571; Metazoa - 7448; Fungi - 3168; Plants - 1056; Viruses - 466; Other Eukaryotes - 7195 (source: NCBI BLink). & (gnl|cdd|87173 : 522.0) no description available & (gnl|cdd|37551 : 440.0) no description available & (reliability: 1454.0) & (original description: Putative NOF1, Description = Putative uncharacterized protein At1g17690, PFAM = PF06862)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf00730_264307-267880' '(at3g09720 : 349.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 47831 Blast hits to 47082 proteins in 3124 species: Archae - 967; Bacteria - 25249; Metazoa - 6167; Fungi - 4801; Plants - 2681; Viruses - 34; Other Eukaryotes - 7932 (source: NCBI BLink). & (gnl|cdd|35565 : 252.0) no description available & (gnl|cdd|30859 : 193.0) no description available & (p46942|db10_nicsy : 105.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 698.0) & (original description: Putative rok1, Description = Putative ATP-dependent RNA helicase DDX52, PFAM = PF00270)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf00975_254642-258786' '(gnl|cdd|35551 : 111.0) no description available & (at5g60990 : 103.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase 36 (TAIR:AT1G16280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative vlg2, Description = Putative ATP-dependent RNA helicase DDX47, PFAM = )' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf01221_1903327-1920132' '(at3g16840 : 778.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 60083 Blast hits to 51461 proteins in 3186 species: Archae - 589; Bacteria - 20345; Metazoa - 13239; Fungi - 7387; Plants - 3446; Viruses - 273; Other Eukaryotes - 14804 (source: NCBI BLink). & (gnl|cdd|35568 : 447.0) no description available & (gnl|cdd|30859 : 272.0) no description available & (p46942|db10_nicsy : 155.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1556.0) & (original description: Putative RH13, Description = DEAD-box ATP-dependent RNA helicase 13, PFAM = PF00271;PF00270)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf01395_345426-356530' '(at4g34910 : 632.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 35246 Blast hits to 34671 proteins in 2939 species: Archae - 524; Bacteria - 16250; Metazoa - 5646; Fungi - 4238; Plants - 2336; Viruses - 4; Other Eukaryotes - 6248 (source: NCBI BLink). & (gnl|cdd|35567 : 618.0) no description available & (gnl|cdd|30859 : 270.0) no description available & (p46942|db10_nicsy : 145.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1264.0) & (original description: Putative RH16, Description = DEAD-box ATP-dependent RNA helicase 16, PFAM = PF00270;PF00271)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf01587_293318-300778' '(p41380|if4a3_nicpl : 773.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g19760 : 702.0) Encodes an RNA helicase that may be a component of the Exon Junction Complex. Subcellular localization is modulated by stress. Under normal conditions it is localized to the nuceloplasm but under hyopoxic conditions it localizes to the nucleolus and splicing speckles.; eukaryotic initiation factor 4A-III (EIF4A-III); FUNCTIONS IN: protein binding, ATP-dependent helicase activity; INVOLVED IN: mRNA processing, response to hypoxia; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G51380.1); Has 50040 Blast hits to 49280 proteins in 3163 species: Archae - 836; Bacteria - 27183; Metazoa - 6400; Fungi - 4843; Plants - 2693; Viruses - 42; Other Eukaryotes - 8043 (source: NCBI BLink). & (gnl|cdd|35549 : 683.0) no description available & (gnl|cdd|30859 : 366.0) no description available & (reliability: 1404.0) & (original description: Putative fal1, Description = Eukaryotic initiation factor 4A-III, PFAM = PF00271;PF00270)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf01764_244388-253386' '(at3g18600 : 714.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 44310 Blast hits to 43105 proteins in 3082 species: Archae - 753; Bacteria - 22440; Metazoa - 6214; Fungi - 4682; Plants - 2500; Viruses - 12; Other Eukaryotes - 7709 (source: NCBI BLink). & (gnl|cdd|35563 : 637.0) no description available & (gnl|cdd|30859 : 329.0) no description available & (p46942|db10_nicsy : 181.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1290.0) & (original description: Putative RH51, Description = DEAD-box ATP-dependent RNA helicase 51, PFAM = PF13959;PF00271;PF00270)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf02267_152061-161321' '(at1g33390 : 1098.0) Over-expression of this gene results in stem fasciation. The predicted amino acid sequence reveals the presence of two domains (DEXH-box or DEAD-box helicase and DUF1065 domain) and fragments of two more domains (HrpA domain and HA2 domain).; FASCIATED STEM 4 (FAS4); FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 16056 Blast hits to 9082 proteins in 1556 species: Archae - 2; Bacteria - 6415; Metazoa - 3625; Fungi - 2171; Plants - 1181; Viruses - 334; Other Eukaryotes - 2328 (source: NCBI BLink). & (gnl|cdd|36144 : 952.0) no description available & (gnl|cdd|31829 : 271.0) no description available & (reliability: 2196.0) & (original description: Putative FAS4, Description = ATP-dependent RNA helicase DEAH13, PFAM = PF07717;PF00271;PF00270;PF04408)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf02267_152073-159424' '(at1g33390 : 934.0) Over-expression of this gene results in stem fasciation. The predicted amino acid sequence reveals the presence of two domains (DEXH-box or DEAD-box helicase and DUF1065 domain) and fragments of two more domains (HrpA domain and HA2 domain).; FASCIATED STEM 4 (FAS4); FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 16056 Blast hits to 9082 proteins in 1556 species: Archae - 2; Bacteria - 6415; Metazoa - 3625; Fungi - 2171; Plants - 1181; Viruses - 334; Other Eukaryotes - 2328 (source: NCBI BLink). & (gnl|cdd|36144 : 802.0) no description available & (gnl|cdd|31829 : 248.0) no description available & (reliability: 1868.0) & (original description: Putative FAS4, Description = Putative ATP-dependent RNA helicase kurz, PFAM = PF00271;PF04408;PF07717)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf02267_152516-155610' '(at1g33390 : 369.0) Over-expression of this gene results in stem fasciation. The predicted amino acid sequence reveals the presence of two domains (DEXH-box or DEAD-box helicase and DUF1065 domain) and fragments of two more domains (HrpA domain and HA2 domain).; FASCIATED STEM 4 (FAS4); FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 16056 Blast hits to 9082 proteins in 1556 species: Archae - 2; Bacteria - 6415; Metazoa - 3625; Fungi - 2171; Plants - 1181; Viruses - 334; Other Eukaryotes - 2328 (source: NCBI BLink). & (gnl|cdd|36144 : 259.0) no description available & (gnl|cdd|31829 : 86.9) no description available & (reliability: 738.0) & (original description: Putative FAS4, Description = Putative ATP-dependent RNA helicase kurz, PFAM = PF07717;PF04408)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf02380_186017-193634' '(at5g05450 : 793.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G71370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35566 : 677.0) no description available & (gnl|cdd|30859 : 301.0) no description available & (p46942|db10_nicsy : 174.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1586.0) & (original description: Putative RH18, Description = DEAD-box ATP-dependent RNA helicase 18, PFAM = PF00271;PF13959;PF00270)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf03412_93839-100104' '(at5g05450 : 516.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G71370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35566 : 452.0) no description available & (gnl|cdd|30859 : 267.0) no description available & (p46942|db10_nicsy : 148.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1032.0) & (original description: Putative spb4, Description = ATP-dependent RNA helicase DDX55, PFAM = PF00270;PF00271)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf04350_286783-302719' '(at1g77030 : 953.0) hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DBP10CT (InterPro:IPR012541), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 42888 Blast hits to 42073 proteins in 3063 species: Archae - 831; Bacteria - 21864; Metazoa - 5973; Fungi - 4375; Plants - 2654; Viruses - 31; Other Eukaryotes - 7160 (source: NCBI BLink). & (gnl|cdd|35558 : 563.0) no description available & (gnl|cdd|30859 : 319.0) no description available & (p46942|db10_nicsy : 202.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1906.0) & (original description: Putative RH29, Description = Putative DEAD-box ATP-dependent RNA helicase 29, PFAM = PF08147;PF00270;PF00271)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf04515_51752-66635' '(at2g06990 : 1565.0) encodes a putative DExH-box RNA helicase that acts redundantly with HEN1, HUA1, and HUA2 in the specification of floral organ identity in the third whorl.; hua enhancer 2 (HEN2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT1G59760.1); Has 9841 Blast hits to 8173 proteins in 1240 species: Archae - 753; Bacteria - 3176; Metazoa - 1197; Fungi - 1159; Plants - 489; Viruses - 32; Other Eukaryotes - 3035 (source: NCBI BLink). & (gnl|cdd|36166 : 1399.0) no description available & (gnl|cdd|34219 : 802.0) no description available & (reliability: 3130.0) & (original description: Putative HEN2, Description = DExH-box ATP-dependent RNA helicase DExH10, PFAM = PF08148;PF13234;PF00271;PF00270)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf06277_538836-543544' '(at2g06990 : 323.0) encodes a putative DExH-box RNA helicase that acts redundantly with HEN1, HUA1, and HUA2 in the specification of floral organ identity in the third whorl.; hua enhancer 2 (HEN2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT1G59760.1); Has 9841 Blast hits to 8173 proteins in 1240 species: Archae - 753; Bacteria - 3176; Metazoa - 1197; Fungi - 1159; Plants - 489; Viruses - 32; Other Eukaryotes - 3035 (source: NCBI BLink). & (gnl|cdd|36166 : 262.0) no description available & (gnl|cdd|87448 : 199.0) no description available & (reliability: 646.0) & (original description: Putative mtr4, Description = Superkiller viralicidic activity 2-like 2, PFAM = PF08148)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf06277_539613-552459' '(at2g06990 : 1497.0) encodes a putative DExH-box RNA helicase that acts redundantly with HEN1, HUA1, and HUA2 in the specification of floral organ identity in the third whorl.; hua enhancer 2 (HEN2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT1G59760.1); Has 9841 Blast hits to 8173 proteins in 1240 species: Archae - 753; Bacteria - 3176; Metazoa - 1197; Fungi - 1159; Plants - 489; Viruses - 32; Other Eukaryotes - 3035 (source: NCBI BLink). & (gnl|cdd|36166 : 1394.0) no description available & (gnl|cdd|34219 : 806.0) no description available & (reliability: 2994.0) & (original description: Putative mtr4, Description = Antiviral helicase, PFAM = PF13234;PF08148;PF00271;PF00270)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf10910_178087-189199' '(at1g31970 : 671.0) STRESS RESPONSE SUPPRESSOR 1 (STRS1); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 53114 Blast hits to 49629 proteins in 3238 species: Archae - 911; Bacteria - 25415; Metazoa - 8113; Fungi - 5284; Plants - 3075; Viruses - 103; Other Eukaryotes - 10213 (source: NCBI BLink). & (gnl|cdd|35552 : 466.0) no description available & (gnl|cdd|30859 : 348.0) no description available & (p46942|db10_nicsy : 319.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1342.0) & (original description: Putative dbp3, Description = ATP-dependent RNA helicase DBP3, PFAM = PF00271;PF00270)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf12280_177465-185079' '(at1g16280 : 578.0) RNA helicase 36 (RH36); FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: post-embryonic development, embryo sac development, rRNA processing; LOCATED IN: nucleus; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 43946 Blast hits to 42938 proteins in 3095 species: Archae - 969; Bacteria - 21832; Metazoa - 6240; Fungi - 4948; Plants - 2606; Viruses - 36; Other Eukaryotes - 7315 (source: NCBI BLink). & (gnl|cdd|35561 : 547.0) no description available & (gnl|cdd|30859 : 357.0) no description available & (q40468|if415_tobac : 176.0) Eukaryotic initiation factor 4A-15 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-15) (eIF-4A-15) - Nicotiana tabacum (Common tobacco) & (reliability: 1156.0) & (original description: Putative RH36, Description = DEAD-box ATP-dependent RNA helicase 36, PFAM = PF00271;PF00270)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf13762_258890-267348' '(at5g54910 : 777.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35564 : 684.0) no description available & (gnl|cdd|30859 : 289.0) no description available & (p46942|db10_nicsy : 167.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1554.0) & (original description: Putative RH32, Description = DEAD-box ATP-dependent RNA helicase 32, PFAM = PF00271;PF00270;PF13959)' T '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'niben101scf20596_72865-92564' '(at3g09720 : 687.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 47831 Blast hits to 47082 proteins in 3124 species: Archae - 967; Bacteria - 25249; Metazoa - 6167; Fungi - 4801; Plants - 2681; Viruses - 34; Other Eukaryotes - 7932 (source: NCBI BLink). & (gnl|cdd|35565 : 490.0) no description available & (gnl|cdd|30859 : 314.0) no description available & (p46942|db10_nicsy : 182.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1374.0) & (original description: Putative RH57, Description = DEAD-box ATP-dependent RNA helicase 57, PFAM = PF00271;PF00270)' T '29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'nbv0.3scaffold25269_22050-28711' '(at1g43860 : 499.0) sequence-specific DNA binding transcription factors; CONTAINS InterPro DOMAIN/s: Ribosome maturation protein SBDS, C-terminal (InterPro:IPR018978), Ribosome maturation protein SBDS (InterPro:IPR002140), Ribosome maturation protein SBDS, N-terminal (InterPro:IPR019783), Ribosome maturation protein SBDS, conserved site (InterPro:IPR018023); Has 1053 Blast hits to 1042 proteins in 349 species: Archae - 219; Bacteria - 2; Metazoa - 264; Fungi - 287; Plants - 65; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|38128 : 319.0) no description available & (gnl|cdd|31689 : 176.0) no description available & (reliability: 998.0) & (original description: Putative SBDS, Description = Ribosome maturation protein SBDS, PFAM = PF01172;PF09377)' T '29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'nbv0.3scaffold27637_634-10706' '(at3g51270 : 514.0) protein serine/threonine kinases;ATP binding;catalytics; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), RIO kinase (InterPro:IPR000687), RIO2 kinase, winged helix, N-terminal (InterPro:IPR015285), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT2G24990.1). & (gnl|cdd|37479 : 446.0) no description available & (gnl|cdd|88274 : 304.0) no description available & (reliability: 1028.0) & (original description: Putative Riok2, Description = Serine/threonine-protein kinase RIO2, PFAM = PF09202;PF01163)' T '29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'nbv0.3scaffold40813_3037-5939' '(at3g22660 : 213.0) rRNA processing protein-related; CONTAINS InterPro DOMAIN/s: Eukaryotic rRNA processing (InterPro:IPR008610); Has 1021 Blast hits to 939 proteins in 244 species: Archae - 0; Bacteria - 62; Metazoa - 355; Fungi - 209; Plants - 58; Viruses - 0; Other Eukaryotes - 337 (source: NCBI BLink). & (gnl|cdd|86972 : 151.0) no description available & (gnl|cdd|38290 : 132.0) no description available & (reliability: 426.0) & (original description: Putative At3g22660, Description = Probable rRNA-processing protein EBP2 homolog, PFAM = PF05890)' T '29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'nbv0.3scaffold47662_9278-12795' '(at2g47420 : 479.0) Ribosomal RNA adenine dimethylase family protein; FUNCTIONS IN: rRNA methyltransferase activity, rRNA (adenine-N6,N6-)-dimethyltransferase activity, rRNA (adenine) methyltransferase activity; INVOLVED IN: rRNA modification, rRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA adenine methylase transferase, N-terminal (InterPro:IPR020598), Ribosomal RNA adenine dimethylase (InterPro:IPR011530), Ribosomal RNA adenine methylase transferase, conserved site (InterPro:IPR020596), Ribosomal RNA adenine methylase transferase (InterPro:IPR001737); BEST Arabidopsis thaliana protein match is: Ribosomal RNA adenine dimethylase family protein (TAIR:AT5G66360.2); Has 9871 Blast hits to 9860 proteins in 3038 species: Archae - 214; Bacteria - 6519; Metazoa - 271; Fungi - 146; Plants - 120; Viruses - 0; Other Eukaryotes - 2601 (source: NCBI BLink). & (gnl|cdd|36038 : 395.0) no description available & (gnl|cdd|30380 : 245.0) no description available & (reliability: 958.0) & (original description: Putative DIM1A, Description = Ribosomal RNA small subunit methyltransferase, PFAM = PF00398)' T '29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'nbv0.3scaffold101710_598-2927' '(at5g37350 : 96.3) Serine/threonine-protein kinase Rio1; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), RIO kinase, conserved site (InterPro:IPR018935), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT2G24990.1); Has 12052 Blast hits to 6663 proteins in 769 species: Archae - 380; Bacteria - 822; Metazoa - 4616; Fungi - 1157; Plants - 579; Viruses - 131; Other Eukaryotes - 4367 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative NtRIO, Description = Serine/threonine-protein kinase RIO1, PFAM = )' T '29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben044scf00002993ctg011_5864-9958' '(gnl|cdd|57965 : 388.0) no description available & (at1g06720 : 361.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Protein of unknown function DUF663 (InterPro:IPR007034); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G42440.1); Has 8329 Blast hits to 5822 proteins in 470 species: Archae - 49; Bacteria - 737; Metazoa - 2493; Fungi - 1253; Plants - 549; Viruses - 77; Other Eukaryotes - 3171 (source: NCBI BLink). & (reliability: 722.0) & (original description: Putative bms1, Description = Ribosome biogenesis protein bms1, PFAM = PF08142)' T '29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben044scf00002993ctg012_1-10909' '(at1g06720 : 685.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Protein of unknown function DUF663 (InterPro:IPR007034); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G42440.1); Has 8329 Blast hits to 5822 proteins in 470 species: Archae - 49; Bacteria - 737; Metazoa - 2493; Fungi - 1253; Plants - 549; Viruses - 77; Other Eukaryotes - 3171 (source: NCBI BLink). & (gnl|cdd|34791 : 418.0) no description available & (gnl|cdd|37191 : 101.0) no description available & (reliability: 1370.0) & (original description: Putative BMS1, Description = Ribosome biogenesis protein BMS1-like protein, PFAM = PF04950)' T '29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben044scf00008319ctg000_3469-12446' '(at3g51270 : 508.0) protein serine/threonine kinases;ATP binding;catalytics; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), RIO kinase (InterPro:IPR000687), RIO2 kinase, winged helix, N-terminal (InterPro:IPR015285), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT2G24990.1). & (gnl|cdd|37479 : 437.0) no description available & (gnl|cdd|88274 : 298.0) no description available & (reliability: 1016.0) & (original description: Putative rio2, Description = Serine/threonine-protein kinase rio2, PFAM = PF01163;PF09202)' T '29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben044scf00030689ctg001_1-3258' '(at2g47420 : 483.0) Ribosomal RNA adenine dimethylase family protein; FUNCTIONS IN: rRNA methyltransferase activity, rRNA (adenine-N6,N6-)-dimethyltransferase activity, rRNA (adenine) methyltransferase activity; INVOLVED IN: rRNA modification, rRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA adenine methylase transferase, N-terminal (InterPro:IPR020598), Ribosomal RNA adenine dimethylase (InterPro:IPR011530), Ribosomal RNA adenine methylase transferase, conserved site (InterPro:IPR020596), Ribosomal RNA adenine methylase transferase (InterPro:IPR001737); BEST Arabidopsis thaliana protein match is: Ribosomal RNA adenine dimethylase family protein (TAIR:AT5G66360.2); Has 9871 Blast hits to 9860 proteins in 3038 species: Archae - 214; Bacteria - 6519; Metazoa - 271; Fungi - 146; Plants - 120; Viruses - 0; Other Eukaryotes - 2601 (source: NCBI BLink). & (gnl|cdd|36038 : 390.0) no description available & (gnl|cdd|30380 : 243.0) no description available & (reliability: 966.0) & (original description: Putative DIM1A, Description = Ribosomal RNA small subunit methyltransferase, PFAM = PF00398)' T '29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben101scf00332_692220-696135' '(at2g47420 : 481.0) Ribosomal RNA adenine dimethylase family protein; FUNCTIONS IN: rRNA methyltransferase activity, rRNA (adenine-N6,N6-)-dimethyltransferase activity, rRNA (adenine) methyltransferase activity; INVOLVED IN: rRNA modification, rRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA adenine methylase transferase, N-terminal (InterPro:IPR020598), Ribosomal RNA adenine dimethylase (InterPro:IPR011530), Ribosomal RNA adenine methylase transferase, conserved site (InterPro:IPR020596), Ribosomal RNA adenine methylase transferase (InterPro:IPR001737); BEST Arabidopsis thaliana protein match is: Ribosomal RNA adenine dimethylase family protein (TAIR:AT5G66360.2); Has 9871 Blast hits to 9860 proteins in 3038 species: Archae - 214; Bacteria - 6519; Metazoa - 271; Fungi - 146; Plants - 120; Viruses - 0; Other Eukaryotes - 2601 (source: NCBI BLink). & (gnl|cdd|36038 : 390.0) no description available & (gnl|cdd|30380 : 242.0) no description available & (reliability: 962.0) & (original description: Putative DIM1A, Description = Ribosomal RNA small subunit methyltransferase, PFAM = PF00398)' T '29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben101scf01534_373567-390670' '(at1g06720 : 1176.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Protein of unknown function DUF663 (InterPro:IPR007034); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G42440.1); Has 8329 Blast hits to 5822 proteins in 470 species: Archae - 49; Bacteria - 737; Metazoa - 2493; Fungi - 1253; Plants - 549; Viruses - 77; Other Eukaryotes - 3171 (source: NCBI BLink). & (gnl|cdd|34791 : 727.0) no description available & (gnl|cdd|37191 : 102.0) no description available & (reliability: 2352.0) & (original description: Putative bms1, Description = Bms1l protein, PFAM = PF08142;PF04950)' T '29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben101scf03093_69683-85961' '(at5g37350 : 701.0) Serine/threonine-protein kinase Rio1; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), RIO kinase, conserved site (InterPro:IPR018935), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT2G24990.1); Has 12052 Blast hits to 6663 proteins in 769 species: Archae - 380; Bacteria - 822; Metazoa - 4616; Fungi - 1157; Plants - 579; Viruses - 131; Other Eukaryotes - 4367 (source: NCBI BLink). & (gnl|cdd|37481 : 564.0) no description available & (gnl|cdd|88277 : 362.0) no description available & (reliability: 1402.0) & (original description: Putative RIOK1, Description = Serine/threonine-protein kinase RIO1, PFAM = PF01163)' T '29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben101scf04184_229098-245892' '(gnl|cdd|38557 : 228.0) no description available & (at5g60340 : 221.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: oxidoreductase activity, ATP binding; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32119 : 135.0) no description available & (reliability: 442.0) & (original description: Putative AAK6, Description = Adenylate kinase isoenzyme 6 homolog, PFAM = PF13238;PF09810)' T '29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben101scf05372_540610-544439' '(gnl|cdd|38557 : 154.0) no description available & (at5g60340 : 122.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: oxidoreductase activity, ATP binding; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32119 : 86.9) no description available & (reliability: 244.0) & (original description: Putative ak6, Description = AK6, PFAM = PF13238)' T '29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben101scf06369_90110-100152' '(at5g37350 : 698.0) Serine/threonine-protein kinase Rio1; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), RIO kinase, conserved site (InterPro:IPR018935), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT2G24990.1); Has 12052 Blast hits to 6663 proteins in 769 species: Archae - 380; Bacteria - 822; Metazoa - 4616; Fungi - 1157; Plants - 579; Viruses - 131; Other Eukaryotes - 4367 (source: NCBI BLink). & (gnl|cdd|37481 : 558.0) no description available & (gnl|cdd|88277 : 360.0) no description available & (reliability: 1396.0) & (original description: Putative rio1, Description = Serine/threonine-protein kinase rio1, PFAM = PF01163)' T '29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben101scf06570_545476-554409' '(at3g51270 : 507.0) protein serine/threonine kinases;ATP binding;catalytics; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), RIO kinase (InterPro:IPR000687), RIO2 kinase, winged helix, N-terminal (InterPro:IPR015285), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT2G24990.1). & (gnl|cdd|37479 : 445.0) no description available & (gnl|cdd|88274 : 298.0) no description available & (reliability: 1014.0) & (original description: Putative Riok2, Description = Serine/threonine-protein kinase RIO2, PFAM = PF09202;PF01163)' T '29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben101scf07027_452631-458813' '(at3g55620 : 451.0) embryo defective 1624 (emb1624); FUNCTIONS IN: ribosome binding, translation initiation factor activity; INVOLVED IN: translational initiation, embryo development ending in seed dormancy; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF6 (InterPro:IPR002769); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF6 (TAIR:AT2G39820.1); Has 941 Blast hits to 941 proteins in 349 species: Archae - 255; Bacteria - 0; Metazoa - 235; Fungi - 146; Plants - 134; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|38395 : 430.0) no description available & (o81920|if6_betvu : 336.0) Eukaryotic translation initiation factor 6 (eIF-6) (Fragment) - Beta vulgaris (Sugar beet) & (gnl|cdd|29623 : 327.0) no description available & (reliability: 902.0) & (original description: Putative eIF6, Description = Eukaryotic translation initiation factor 6, PFAM = PF01912)' T '29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben101scf07474_73158-86314' '(at1g43860 : 501.0) sequence-specific DNA binding transcription factors; CONTAINS InterPro DOMAIN/s: Ribosome maturation protein SBDS, C-terminal (InterPro:IPR018978), Ribosome maturation protein SBDS (InterPro:IPR002140), Ribosome maturation protein SBDS, N-terminal (InterPro:IPR019783), Ribosome maturation protein SBDS, conserved site (InterPro:IPR018023); Has 1053 Blast hits to 1042 proteins in 349 species: Archae - 219; Bacteria - 2; Metazoa - 264; Fungi - 287; Plants - 65; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|38128 : 321.0) no description available & (gnl|cdd|31689 : 177.0) no description available & (reliability: 1002.0) & (original description: Putative SBDS, Description = Ribosome maturation protein SBDS, PFAM = PF01172;PF09377)' T '29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben101scf14778_31038-35121' '(at3g56510 : 248.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: TATA-binding protein binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38362 : 174.0) no description available & (reliability: 496.0) & (original description: Putative v1g124028, Description = Predicted protein, PFAM = PF00076)' T '29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'niben101scf39449_15708-18371' '(at3g22660 : 222.0) rRNA processing protein-related; CONTAINS InterPro DOMAIN/s: Eukaryotic rRNA processing (InterPro:IPR008610); Has 1021 Blast hits to 939 proteins in 244 species: Archae - 0; Bacteria - 62; Metazoa - 355; Fungi - 209; Plants - 58; Viruses - 0; Other Eukaryotes - 337 (source: NCBI BLink). & (gnl|cdd|86972 : 160.0) no description available & (gnl|cdd|38290 : 135.0) no description available & (reliability: 444.0) & (original description: Putative At3g22660, Description = Probable rRNA-processing protein EBP2 homolog, PFAM = PF05890)' T '29.2.2.50' 'protein.synthesis.ribosome biogenesis.BRIX' 'nbv0.3scaffold1938_5008-11554' '(at1g63780 : 320.0) Small nucleolar ribonucleoprotein protein involved in ribosomal RNA processing. Located in nucleolus and cajal bodies.; IMP4; CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); BEST Arabidopsis thaliana protein match is: Ribosomal RNA processing Brix domain protein (TAIR:AT4G01560.1); Has 804 Blast hits to 801 proteins in 232 species: Archae - 12; Bacteria - 0; Metazoa - 253; Fungi - 267; Plants - 106; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|37992 : 289.0) no description available & (gnl|cdd|86660 : 118.0) no description available & (reliability: 640.0) & (original description: Putative IMP4, Description = U3 small nucleolar ribonucleoprotein protein IMP4, PFAM = PF04427)' T '29.2.2.50' 'protein.synthesis.ribosome biogenesis.BRIX' 'nbv0.3scaffold2345_10703-20055' '(at5g61770 : 449.0) PETER PAN-like protein (PPAN); CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38174 : 331.0) no description available & (gnl|cdd|86660 : 111.0) no description available & (reliability: 898.0) & (original description: Putative PPAN, Description = Peter Pan-like protein, PFAM = PF04427)' T '29.2.2.50' 'protein.synthesis.ribosome biogenesis.BRIX' 'nbv0.3scaffold6829_48850-59604' '(at3g15460 : 465.0) Ribosomal RNA processing Brix domain protein; CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); BEST Arabidopsis thaliana protein match is: Ribosomal RNA processing Brix domain protein (TAIR:AT1G52930.1); Has 415 Blast hits to 413 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 138; Plants - 66; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|38182 : 375.0) no description available & (gnl|cdd|34755 : 246.0) no description available & (reliability: 930.0) & (original description: Putative brix1, Description = Ribosome biogenesis protein BRX1 homolog, PFAM = PF04427)' T '29.2.2.50' 'protein.synthesis.ribosome biogenesis.BRIX' 'niben044scf00012366ctg002_2281-5784' '(at1g63780 : 242.0) Small nucleolar ribonucleoprotein protein involved in ribosomal RNA processing. Located in nucleolus and cajal bodies.; IMP4; CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); BEST Arabidopsis thaliana protein match is: Ribosomal RNA processing Brix domain protein (TAIR:AT4G01560.1); Has 804 Blast hits to 801 proteins in 232 species: Archae - 12; Bacteria - 0; Metazoa - 253; Fungi - 267; Plants - 106; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|37992 : 226.0) no description available & (gnl|cdd|86660 : 120.0) no description available & (reliability: 484.0) & (original description: Putative imp4, Description = U3 small nucleolar ribonucleoprotein IMP4, PFAM = PF04427)' T '29.2.2.50' 'protein.synthesis.ribosome biogenesis.BRIX' 'niben044scf00022878ctg001_1020-4238' '(at1g63780 : 147.0) Small nucleolar ribonucleoprotein protein involved in ribosomal RNA processing. Located in nucleolus and cajal bodies.; IMP4; CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); BEST Arabidopsis thaliana protein match is: Ribosomal RNA processing Brix domain protein (TAIR:AT4G01560.1); Has 804 Blast hits to 801 proteins in 232 species: Archae - 12; Bacteria - 0; Metazoa - 253; Fungi - 267; Plants - 106; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|37992 : 125.0) no description available & (reliability: 294.0) & (original description: Putative imp4, Description = U3 small nucleolar ribonucleoprotein IMP4, PFAM = )' T '29.2.2.50' 'protein.synthesis.ribosome biogenesis.BRIX' 'niben044scf00044462ctg007_12736-15713' '(at1g63780 : 214.0) Small nucleolar ribonucleoprotein protein involved in ribosomal RNA processing. Located in nucleolus and cajal bodies.; IMP4; CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); BEST Arabidopsis thaliana protein match is: Ribosomal RNA processing Brix domain protein (TAIR:AT4G01560.1); Has 804 Blast hits to 801 proteins in 232 species: Archae - 12; Bacteria - 0; Metazoa - 253; Fungi - 267; Plants - 106; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|37992 : 197.0) no description available & (gnl|cdd|86660 : 101.0) no description available & (reliability: 428.0) & (original description: Putative imp4, Description = U3 small nucleolar ribonucleoprotein imp4, PFAM = PF04427)' T '29.2.2.50' 'protein.synthesis.ribosome biogenesis.BRIX' 'niben101scf01634_276024-283032' '(at3g15460 : 465.0) Ribosomal RNA processing Brix domain protein; CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); BEST Arabidopsis thaliana protein match is: Ribosomal RNA processing Brix domain protein (TAIR:AT1G52930.1); Has 415 Blast hits to 413 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 138; Plants - 66; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|38182 : 377.0) no description available & (gnl|cdd|34755 : 247.0) no description available & (reliability: 930.0) & (original description: Putative BRX1, Description = Ribosome biogenesis protein BRX1, PFAM = PF04427)' T '29.2.2.50' 'protein.synthesis.ribosome biogenesis.BRIX' 'niben101scf01956_984749-989996' '(q9awm9|bxdc1_orysa : 391.0) Brix domain-containing protein 1 homolog - Oryza sativa (Rice) & (at3g23620 : 382.0) Ribosomal RNA processing Brix domain protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); Has 435 Blast hits to 425 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 138; Plants - 54; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|38241 : 288.0) no description available & (gnl|cdd|34709 : 168.0) no description available & (reliability: 764.0) & (original description: Putative rpf2, Description = Ribosome biogenesis protein RPF2 homolog, PFAM = PF04427)' T '29.2.2.50' 'protein.synthesis.ribosome biogenesis.BRIX' 'niben101scf02891_21661-30127' '(at5g61770 : 456.0) PETER PAN-like protein (PPAN); CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38174 : 337.0) no description available & (gnl|cdd|86660 : 113.0) no description available & (reliability: 912.0) & (original description: Putative PPAN, Description = Peter Pan-like protein, PFAM = PF04427)' T '29.2.2.50' 'protein.synthesis.ribosome biogenesis.BRIX' 'niben101scf05005_246973-257310' '(at1g63780 : 400.0) Small nucleolar ribonucleoprotein protein involved in ribosomal RNA processing. Located in nucleolus and cajal bodies.; IMP4; CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); BEST Arabidopsis thaliana protein match is: Ribosomal RNA processing Brix domain protein (TAIR:AT4G01560.1); Has 804 Blast hits to 801 proteins in 232 species: Archae - 12; Bacteria - 0; Metazoa - 253; Fungi - 267; Plants - 106; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|37992 : 355.0) no description available & (gnl|cdd|86660 : 136.0) no description available & (reliability: 800.0) & (original description: Putative imp4, Description = U3 small nucleolar ribonucleoprotein protein, PFAM = PF04427)' T '29.2.2.50' 'protein.synthesis.ribosome biogenesis.BRIX' 'niben101scf13823_222970-229158' '(at4g01560 : 421.0) maternal effect embryo arrest 49 (MEE49); CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); BEST Arabidopsis thaliana protein match is: Ribosomal RNA processing Brix domain protein (TAIR:AT1G63780.1); Has 893 Blast hits to 882 proteins in 227 species: Archae - 2; Bacteria - 0; Metazoa - 265; Fungi - 337; Plants - 121; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (gnl|cdd|37991 : 334.0) no description available & (gnl|cdd|86660 : 138.0) no description available & (reliability: 842.0) & (original description: Putative rpf1, Description = Ribosome production factor 1, PFAM = PF04427)' T '29.2.2.50' 'protein.synthesis.ribosome biogenesis.BRIX' 'niben101scf15995_199697-210758' '(at1g63780 : 463.0) Small nucleolar ribonucleoprotein protein involved in ribosomal RNA processing. Located in nucleolus and cajal bodies.; IMP4; CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); BEST Arabidopsis thaliana protein match is: Ribosomal RNA processing Brix domain protein (TAIR:AT4G01560.1); Has 804 Blast hits to 801 proteins in 232 species: Archae - 12; Bacteria - 0; Metazoa - 253; Fungi - 267; Plants - 106; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|37992 : 423.0) no description available & (gnl|cdd|86660 : 168.0) no description available & (reliability: 926.0) & (original description: Putative imp4, Description = U3 small nucleolar ribonucleoprotein protein, PFAM = PF04427)' T '29.2.2.99' 'protein.synthesis.ribosome biogenesis.misc' '' '' '29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold4521_939-6489' '(at1g53900 : 577.0) Eukaryotic translation initiation factor 2B (eIF-2B) family protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649), Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Eukaryotic translation initiation factor 2B (eIF-2B) family protein (TAIR:AT1G53880.1); Has 4724 Blast hits to 4722 proteins in 1045 species: Archae - 373; Bacteria - 1754; Metazoa - 521; Fungi - 487; Plants - 467; Viruses - 0; Other Eukaryotes - 1122 (source: NCBI BLink). & (gnl|cdd|36679 : 457.0) no description available & (gnl|cdd|85181 : 233.0) no description available & (reliability: 1154.0) & (original description: Putative eif2b1, Description = Translation initiation factor eIF-2B subunit alpha, PFAM = PF01008)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold9198_7011-16479' '(at3g60240 : 721.0) protein synthesis initiation factor 4G (EIF4G). A mutation in this gene (cum2-1) results in decreased accumulation of CMV coat protein in upper, uninoculated leaves. Likely affects cell-to-cell movement of the virus, also affects TCV multiplication.; eukaryotic translation initiation factor 4G (EIF4G); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: response to virus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT5G57870.1); Has 9538 Blast hits to 7052 proteins in 555 species: Archae - 16; Bacteria - 1070; Metazoa - 4140; Fungi - 1856; Plants - 683; Viruses - 80; Other Eukaryotes - 1693 (source: NCBI BLink). & (gnl|cdd|35622 : 300.0) no description available & (gnl|cdd|86149 : 178.0) no description available & (q03387|if41_wheat : 168.0) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) - Triticum aestivum (Wheat) & (reliability: 1442.0) & (original description: Putative eIF4G, Description = Eukaryotic translation initiation factor 4 gamma 1, PFAM = PF02854;PF02847)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold9950_46456-49572' '(at4g20980 : 822.0) Eukaryotic translation initiation factor 3 subunit 7 (eIF-3); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 3, subunit 7 (InterPro:IPR007783); BEST Arabidopsis thaliana protein match is: Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) (TAIR:AT5G44320.1). & (gnl|cdd|37690 : 746.0) no description available & (gnl|cdd|68656 : 712.0) no description available & (reliability: 1644.0) & (original description: Putative TIF3D1, Description = Eukaryotic translation initiation factor 3 subunit D, PFAM = PF05091)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold10636_24088-32994' '(at1g48410 : 1507.0) Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus.; ARGONAUTE 1 (AGO1); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT5G43810.2). & (gnl|cdd|36259 : 860.0) no description available & (gnl|cdd|72942 : 567.0) no description available & (reliability: 2830.0) & (original description: Putative AGO1, Description = Protein argonaute 1, PFAM = PF16488;PF16486;PF16487;PF02170;PF08699;PF02171;PF12764)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold10678_40708-47904' '(q94hf1|if3c_orysa : 350.0) Eukaryotic translation initiation factor 3 subunit 12 (eIF-3 p25) (eIF3k) - Oryza sativa (Rice) & (at4g33250 : 337.0) Encodes initiation factor 3k (EIF3k).; eukaryotic translation initiation factor 3K (EIF3K); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, regulation of translational initiation; LOCATED IN: eukaryotic translation initiation factor 3 complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Translation initiation factor 3, subunit 12, N-terminal, eukaryotic (InterPro:IPR016020), Translation initiation factor 3, subunit 12, eukaryotic (InterPro:IPR009374), Armadillo-type fold (InterPro:IPR016024), SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); Has 423 Blast hits to 423 proteins in 172 species: Archae - 0; Bacteria - 0; Metazoa - 186; Fungi - 100; Plants - 89; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|38462 : 244.0) no description available & (gnl|cdd|67037 : 86.5) no description available & (reliability: 674.0) & (original description: Putative TIF3K1, Description = Eukaryotic translation initiation factor 3 subunit K, PFAM = PF10075)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold14382_28968-31981' '(at1g10840 : 542.0) Encodes eukaryotic initiation factor 3H1 subunit (TIF3H1).; translation initiation factor 3 subunit H1 (TIF3H1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36773 : 273.0) no description available & (reliability: 1084.0) & (original description: Putative TIF3H1, Description = Eukaryotic translation initiation factor 3 subunit H, PFAM = PF01398)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold21099_3732-10129' '(at1g04170 : 841.0) protein synthesis initiation factor eIF2 gamma; eukaryotic translation initiation factor 2 gamma subunit (EIF2 GAMMA); CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Initiation factor eIF2 gamma, C-terminal (InterPro:IPR015256), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT4G18330.2); Has 29259 Blast hits to 29225 proteins in 6532 species: Archae - 651; Bacteria - 17093; Metazoa - 4832; Fungi - 574; Plants - 965; Viruses - 0; Other Eukaryotes - 5144 (source: NCBI BLink). & (gnl|cdd|35687 : 826.0) no description available & (gnl|cdd|34854 : 571.0) no description available & (q9tjq8|eftu_prowi : 90.1) Elongation factor Tu (EF-Tu) - Prototheca wickerhamii & (reliability: 1682.0) & (original description: Putative EIF2S3, Description = Eukaryotic translation initiation factor 2 subunit 3, PFAM = PF00009;PF03144;PF09173)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold22132_23199-31529' '(at5g57870 : 822.0) Encodes a putative eukaryotic translation initiation factor.; eukaryotic translation Initiation Factor isoform 4G1 (eIFiso4G1); FUNCTIONS IN: RNA binding, binding, translation initiation factor activity; INVOLVED IN: translational initiation, translation, RNA metabolic process; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT2G24050.1); Has 2168 Blast hits to 1785 proteins in 242 species: Archae - 0; Bacteria - 22; Metazoa - 1155; Fungi - 192; Plants - 508; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (q03387|if41_wheat : 776.0) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) - Triticum aestivum (Wheat) & (gnl|cdd|35622 : 417.0) no description available & (gnl|cdd|86149 : 167.0) no description available & (reliability: 1644.0) & (original description: Putative eIF4, Description = Eukaryotic translation initiation factor 4G, PFAM = PF02847;PF02854)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold22290_20563-31385' '(at2g13540 : 332.0) Encodes a nuclear cap-binding protein that forms a heterodimeric complex with CBP20 and is involved in ABA signaling and flowering. Mutants are early flowering and exhibit hypersensitive response to ABA in germination inhibition.Loss of ABH1 function results in abnormal processing of mRNAs for several important floral regulators (FLC, CO, FLM). Analysis of loss of function mutations suggests a role in pri-miRNA processing and mRNA splicing. Note that two different mutant alleles were given the same name abh1-7 (Kuhn et al 2007; Kim et al 2008). To avoid confusion, abh1-7 described in Kim et al (2008) has been renamed abh1-107 (other names: ensalada-1, ens-1).; ABA HYPERSENSITIVE 1 (ABH1); CONTAINS InterPro DOMAIN/s: MIF4G-like, type 2 (InterPro:IPR015174), MIF4G-like, type 1 (InterPro:IPR015172), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); Has 514 Blast hits to 510 proteins in 229 species: Archae - 0; Bacteria - 96; Metazoa - 188; Fungi - 131; Plants - 55; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|36320 : 206.0) no description available & (reliability: 664.0) & (original description: Putative cbp80, Description = Truncated nuclear cap-binding protein, PFAM = PF02854)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold22528_22516-26409' '(q40467|if414_tobac : 822.0) Eukaryotic initiation factor 4A-14 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-14) (eIF-4A-14) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 777.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (gnl|cdd|35548 : 574.0) no description available & (gnl|cdd|30859 : 378.0) no description available & (reliability: 1554.0) & (original description: Putative fal1, Description = ATP-dependent RNA helicase eIF4A, PFAM = PF00270;PF00271)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold29177_132-4503' '(p41381|if4a8_tobac : 745.0) Eukaryotic initiation factor 4A-8 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-8) (eIF-4A-8) - Nicotiana tabacum (Common tobacco) & (at1g54270 : 682.0) member of eIF4A - eukaryotic initiation factor 4A; eif4a-2 (EIF4A-2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4A1 (TAIR:AT3G13920.4). & (gnl|cdd|35548 : 495.0) no description available & (gnl|cdd|30859 : 323.0) no description available & (reliability: 1364.0) & (original description: Putative ifdA, Description = ATP-dependent RNA helicase eIF4A, PFAM = PF00270;PF00271)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold31186_4106-8799' '(p41381|if4a8_tobac : 819.0) Eukaryotic initiation factor 4A-8 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-8) (eIF-4A-8) - Nicotiana tabacum (Common tobacco) & (at1g54270 : 756.0) member of eIF4A - eukaryotic initiation factor 4A; eif4a-2 (EIF4A-2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4A1 (TAIR:AT3G13920.4). & (gnl|cdd|35548 : 565.0) no description available & (gnl|cdd|30859 : 373.0) no description available & (reliability: 1512.0) & (original description: Putative eif4a1b, Description = Eif4a1b protein, PFAM = PF00271;PF00270)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold36209_645-7733' '(at3g07300 : 506.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT2G44070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36678 : 368.0) no description available & (gnl|cdd|31377 : 179.0) no description available & (reliability: 1012.0) & (original description: Putative eif2Bb, Description = Translation initiation factor eIF-2B subunit beta, PFAM = PF01008)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold45731_2797-12691' '(at4g23330 : 126.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2365 (InterPro:IPR019314). & (reliability: 252.0) & (original description: Putative BnaC01g14900D, Description = BnaC01g14900D protein, PFAM = PF10157)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold54128_1-6512' '(at2g45730 : 489.0) eukaryotic initiation factor 3 gamma subunit family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, regulation of translational initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic initiation factor 3, gamma subunit (InterPro:IPR007316), tRNA (adenine-N(1)-)-methyltransferase, non-catalytic TRM6 subunit (InterPro:IPR017423); Has 402 Blast hits to 378 proteins in 203 species: Archae - 0; Bacteria - 4; Metazoa - 118; Fungi - 152; Plants - 45; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (gnl|cdd|36630 : 360.0) no description available & (gnl|cdd|67789 : 246.0) no description available & (reliability: 978.0) & (original description: Putative F751_2956, Description = tRNA (Adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6, PFAM = PF04189)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold57290_539-11115' '(at1g76810 : 1013.0) eukaryotic translation initiation factor 2 (eIF-2) family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 (eIF-2) family protein (TAIR:AT1G76720.1); Has 208612 Blast hits to 135501 proteins in 4311 species: Archae - 1435; Bacteria - 54544; Metazoa - 70572; Fungi - 21896; Plants - 9806; Viruses - 724; Other Eukaryotes - 49635 (source: NCBI BLink). & (gnl|cdd|36359 : 1007.0) no description available & (gnl|cdd|81253 : 527.0) no description available & (p57997|if2c_phavu : 94.0) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 2026.0) & (original description: Putative IF2P, Description = Eukaryotic translation initiation factor, PFAM = PF11987;PF00009;PF03144)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold70394_394-8391' '(o24473|if2b_wheat : 385.0) Eukaryotic translation initiation factor 2 subunit beta (eIF-2-beta) (P38) - Triticum aestivum (Wheat) & (at5g20920 : 360.0) protein synthesis initiation factor eIF2 beta; eukaryotic translation initiation factor 2 beta subunit (EIF2 BETA); FUNCTIONS IN: protein binding, translation initiation factor activity; INVOLVED IN: translational initiation, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF2/IF5, N-terminal (InterPro:IPR016189), Translation initiation factor IF2/IF5, zinc-binding (InterPro:IPR016190), Translation initiation factor IF2/IF5 (InterPro:IPR002735); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF2/IF5 (TAIR:AT3G07920.1); Has 1323 Blast hits to 1320 proteins in 358 species: Archae - 271; Bacteria - 0; Metazoa - 350; Fungi - 277; Plants - 186; Viruses - 4; Other Eukaryotes - 235 (source: NCBI BLink). & (gnl|cdd|37979 : 283.0) no description available & (gnl|cdd|85734 : 177.0) no description available & (reliability: 720.0) & (original description: Putative eIF2A, Description = Eukaryotic translation initiation factor 2 subunit 2, PFAM = PF01873)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold79223_2861-6255' '(p48724|if5_phavu : 449.0) Eukaryotic translation initiation factor 5 (eIF-5) - Phaseolus vulgaris (Kidney bean) (French bean) & (at1g77840 : 434.0) Translation initiation factor IF2/IF5; FUNCTIONS IN: binding, translation initiation factor activity; INVOLVED IN: translational initiation, regulation of translational initiation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF2/IF5, N-terminal (InterPro:IPR016189), Translation initiation factor IF2/IF5, zinc-binding (InterPro:IPR016190), eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307), Translation initiation factor IF2/IF5 (InterPro:IPR002735), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF2/IF5 (TAIR:AT1G36730.1); Has 4597 Blast hits to 3869 proteins in 471 species: Archae - 198; Bacteria - 234; Metazoa - 1589; Fungi - 711; Plants - 391; Viruses - 12; Other Eukaryotes - 1462 (source: NCBI BLink). & (gnl|cdd|37978 : 358.0) no description available & (gnl|cdd|85734 : 150.0) no description available & (reliability: 868.0) & (original description: Putative EIF5, Description = Eukaryotic translation initiation factor 5, PFAM = PF01873;PF02020)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.3scaffold97838_1-4108' '(q40471|if4a9_tobac : 535.0) Eukaryotic initiation factor 4A-9 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-9) (eIF-4A-9) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 525.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (gnl|cdd|35549 : 428.0) no description available & (gnl|cdd|30859 : 285.0) no description available & (reliability: 1050.0) & (original description: Putative fal1, Description = ATP-dependent RNA helicase eIF4A, PFAM = PF00270;PF00271)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold119_942798-951843' '(at1g10840 : 552.0) Encodes eukaryotic initiation factor 3H1 subunit (TIF3H1).; translation initiation factor 3 subunit H1 (TIF3H1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36773 : 279.0) no description available & (reliability: 1104.0) & (original description: Putative eif, Description = Eukaryotic translation initiation factor 3 subunit H, PFAM = PF01398)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold434_1405-4346' '(at5g25780 : 439.0) member of eIF3b - eukaryotic initiation factor 3b; eukaryotic translation initiation factor 3B-2 (EIF3B-2); FUNCTIONS IN: protein binding, nucleic acid binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: cultured cell, seed; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Eukaryotic translation initiation factor 2A, central region (InterPro:IPR013979), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Translation initiation factor eIF-3b (InterPro:IPR011400), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: translation initiation factor 3B1 (TAIR:AT5G27640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p56821|if39_tobac : 435.0) Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p110) (eIF3b) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|37525 : 276.0) no description available & (gnl|cdd|72087 : 252.0) no description available & (reliability: 878.0) & (original description: Putative eIF5, Description = Eukaryotic translation initiation factor 3 subunit B, PFAM = PF08662)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold489_25149-51365' '(at2g13540 : 1048.0) Encodes a nuclear cap-binding protein that forms a heterodimeric complex with CBP20 and is involved in ABA signaling and flowering. Mutants are early flowering and exhibit hypersensitive response to ABA in germination inhibition.Loss of ABH1 function results in abnormal processing of mRNAs for several important floral regulators (FLC, CO, FLM). Analysis of loss of function mutations suggests a role in pri-miRNA processing and mRNA splicing. Note that two different mutant alleles were given the same name abh1-7 (Kuhn et al 2007; Kim et al 2008). To avoid confusion, abh1-7 described in Kim et al (2008) has been renamed abh1-107 (other names: ensalada-1, ens-1).; ABA HYPERSENSITIVE 1 (ABH1); CONTAINS InterPro DOMAIN/s: MIF4G-like, type 2 (InterPro:IPR015174), MIF4G-like, type 1 (InterPro:IPR015172), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); Has 514 Blast hits to 510 proteins in 229 species: Archae - 0; Bacteria - 96; Metazoa - 188; Fungi - 131; Plants - 55; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|36320 : 601.0) no description available & (gnl|cdd|87792 : 151.0) no description available & (reliability: 2096.0) & (original description: Putative ABH1, Description = Nuclear cap-binding protein subunit 1, PFAM = PF09088;PF09090;PF02854)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold644_370833-381630' '(at5g36230 : 284.0) ARM repeat superfamily protein; FUNCTIONS IN: binding, translation initiation factor activity; INVOLVED IN: regulation of translational initiation; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G65220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37508 : 244.0) no description available & (gnl|cdd|47818 : 88.0) no description available & (reliability: 568.0) & (original description: Putative gpm710, Description = Basic leucine zipper and W2 domain-containing protein 2, PFAM = PF02020)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold679_128627-140501' '(at3g60240 : 627.0) protein synthesis initiation factor 4G (EIF4G). A mutation in this gene (cum2-1) results in decreased accumulation of CMV coat protein in upper, uninoculated leaves. Likely affects cell-to-cell movement of the virus, also affects TCV multiplication.; eukaryotic translation initiation factor 4G (EIF4G); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: response to virus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT5G57870.1); Has 9538 Blast hits to 7052 proteins in 555 species: Archae - 16; Bacteria - 1070; Metazoa - 4140; Fungi - 1856; Plants - 683; Viruses - 80; Other Eukaryotes - 1693 (source: NCBI BLink). & (gnl|cdd|35622 : 268.0) no description available & (q03387|if41_wheat : 177.0) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) - Triticum aestivum (Wheat) & (gnl|cdd|86149 : 171.0) no description available & (reliability: 1254.0) & (original description: Putative eIF4G, Description = Eukaryotic translation initiation factor 4 gamma 1, PFAM = PF02854;PF02847)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold1246_97150-101531' '(q40468|if415_tobac : 715.0) Eukaryotic initiation factor 4A-15 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-15) (eIF-4A-15) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 689.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (gnl|cdd|35549 : 535.0) no description available & (gnl|cdd|30859 : 363.0) no description available & (reliability: 1378.0) & (original description: Putative ifdA, Description = ATP-dependent RNA helicase eIF4A, PFAM = PF00271;PF00270)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold1601_224500-227924' '(at5g43810 : 184.0) Encodes a member of the EIF2C (elongation initiation factor 2c)/ Argonaute class of proteins. Required to establish the central-peripheral organization of the embryo apex. Along with WUS and CLV genes, controls the relative organization of central zone and peripheral zone cells in meristems. Acts in embryonic provascular tissue potentiating WUSCHEL function during meristem development in the embryo.; ZWILLE (ZLL); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT1G48410.1). & (gnl|cdd|72942 : 161.0) no description available & (gnl|cdd|36259 : 141.0) no description available & (reliability: 368.0) & (original description: Putative ago2, Description = Protein argonaute 1A, PFAM = PF02171)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold2017_101859-111170' '(q40554|if3a_tobac : 1085.0) Eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a) (PNLA-35) - Nicotiana tabacum (Common tobacco) & (at4g11420 : 949.0) Encodes a subunit of eukaryotic initiation factor 3 (eIF3), a multisubunit complex that is required for binding of mRNA to 40 S ribosomal subunits, stabilization of ternary complex binding to 40 S subunits, and dissociation of 40 and 60 S subunits.; eukaryotic translation initiation factor 3A (EIF3A); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: eukaryotic translation initiation factor 3 complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23330.1); Has 151795 Blast hits to 76455 proteins in 3156 species: Archae - 1231; Bacteria - 22686; Metazoa - 70860; Fungi - 11049; Plants - 6472; Viruses - 438; Other Eukaryotes - 39059 (source: NCBI BLink). & (gnl|cdd|37283 : 761.0) no description available & (reliability: 1898.0) & (original description: Putative TIF3A1, Description = Eukaryotic translation initiation factor 3 subunit A, PFAM = PF01399)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold2261_230637-233732' '(at1g63410 : 153.0) Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT3G14260.1); Has 268 Blast hits to 267 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 268; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86676 : 147.0) no description available & (reliability: 292.0) & (original description: Putative At1g63410, Description = Protein LURP-one-related 4, PFAM = PF04525)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold2352_199011-210104' '(at1g73180 : 663.0) Eukaryotic translation initiation factor eIF2A family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Eukaryotic translation initiation factor 2A, central region (InterPro:IPR013979), Translation initiation factor eIF-2A (InterPro:IPR011387), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943); BEST Arabidopsis thaliana protein match is: translation initiation factor 3B1 (TAIR:AT5G27640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37526 : 456.0) no description available & (gnl|cdd|72087 : 286.0) no description available & (p56821|if39_tobac : 83.2) Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p110) (eIF3b) - Nicotiana tabacum (Common tobacco) & (reliability: 1326.0) & (original description: Putative eIF2A, Description = Eukaryotic translation initiation factor 2A, PFAM = PF08662)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold2369_65-9160' '(at5g57870 : 813.0) Encodes a putative eukaryotic translation initiation factor.; eukaryotic translation Initiation Factor isoform 4G1 (eIFiso4G1); FUNCTIONS IN: RNA binding, binding, translation initiation factor activity; INVOLVED IN: translational initiation, translation, RNA metabolic process; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT2G24050.1); Has 2168 Blast hits to 1785 proteins in 242 species: Archae - 0; Bacteria - 22; Metazoa - 1155; Fungi - 192; Plants - 508; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (q03387|if41_wheat : 766.0) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) - Triticum aestivum (Wheat) & (gnl|cdd|35622 : 419.0) no description available & (gnl|cdd|86149 : 170.0) no description available & (reliability: 1626.0) & (original description: Putative eIF4, Description = Eukaryotic translation initiation factor 4G, PFAM = PF02854;PF02847)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold2552_86996-98202' '(gnl|cdd|69777 : 337.0) no description available & (at3g26400 : 210.0) member of eIF4B - eukaryotic initiation factor 4B; eukaryotic translation initiation factor 4B1 (EIF4B1); CONTAINS InterPro DOMAIN/s: Plant specific eukaryotic initiation factor 4B (InterPro:IPR010433); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4B2 (TAIR:AT1G13020.1); Has 19846 Blast hits to 11644 proteins in 926 species: Archae - 13; Bacteria - 5482; Metazoa - 6891; Fungi - 1262; Plants - 3241; Viruses - 222; Other Eukaryotes - 2735 (source: NCBI BLink). & (reliability: 420.0) & (original description: Putative SNS, Description = Eukaryotic translation initiation factor 4B1, PFAM = PF06273;PF06273;PF06273)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold3262_159402-183362' '(at2g34970 : 793.0) Trimeric LpxA-like enzyme; FUNCTIONS IN: binding, transferase activity, translation initiation factor activity, nucleotidyltransferase activity; INVOLVED IN: biosynthetic process, regulation of translational initiation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307), Armadillo-type fold (InterPro:IPR016024), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Trimeric LpxA-like enzyme (TAIR:AT4G18300.1); Has 8121 Blast hits to 7961 proteins in 1548 species: Archae - 574; Bacteria - 3735; Metazoa - 1296; Fungi - 469; Plants - 387; Viruses - 0; Other Eukaryotes - 1660 (source: NCBI BLink). & (gnl|cdd|36674 : 669.0) no description available & (gnl|cdd|31401 : 165.0) no description available & (reliability: 1586.0) & (original description: Putative At2g34970, Description = At2g34970, PFAM = PF00483;PF00132;PF00132)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold3393_220154-223488' '(p48724|if5_phavu : 468.0) Eukaryotic translation initiation factor 5 (eIF-5) - Phaseolus vulgaris (Kidney bean) (French bean) & (at1g77840 : 430.0) Translation initiation factor IF2/IF5; FUNCTIONS IN: binding, translation initiation factor activity; INVOLVED IN: translational initiation, regulation of translational initiation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF2/IF5, N-terminal (InterPro:IPR016189), Translation initiation factor IF2/IF5, zinc-binding (InterPro:IPR016190), eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307), Translation initiation factor IF2/IF5 (InterPro:IPR002735), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF2/IF5 (TAIR:AT1G36730.1); Has 4597 Blast hits to 3869 proteins in 471 species: Archae - 198; Bacteria - 234; Metazoa - 1589; Fungi - 711; Plants - 391; Viruses - 12; Other Eukaryotes - 1462 (source: NCBI BLink). & (gnl|cdd|37978 : 345.0) no description available & (gnl|cdd|85734 : 148.0) no description available & (reliability: 860.0) & (original description: Putative EIF5, Description = Eukaryotic translation initiation factor 5, PFAM = PF01873;PF02020)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold3474_104555-110513' '(p56821|if39_tobac : 1214.0) Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p110) (eIF3b) - Nicotiana tabacum (Common tobacco) & (at5g27640 : 1043.0) encodes a member of eukaryotic translation initiation factor 3B family.; translation initiation factor 3B1 (TIF3B1); FUNCTIONS IN: nucleic acid binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytosol, eukaryotic translation initiation factor 3 complex, nucleus; EXPRESSED IN: guard cell, cultured cell, seed; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 2A, central region (InterPro:IPR013979), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Translation initiation factor eIF-3b (InterPro:IPR011400); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3B-2 (TAIR:AT5G25780.1); Has 966 Blast hits to 959 proteins in 251 species: Archae - 0; Bacteria - 19; Metazoa - 298; Fungi - 315; Plants - 111; Viruses - 6; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|37525 : 622.0) no description available & (gnl|cdd|34929 : 286.0) no description available & (reliability: 2086.0) & (original description: Putative TIF3B1, Description = Eukaryotic translation initiation factor 3 subunit B, PFAM = PF00076;PF08662)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold3474_107027-111509' '(p56821|if39_tobac : 153.0) Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p110) (eIF3b) - Nicotiana tabacum (Common tobacco) & (at5g27640 : 118.0) encodes a member of eukaryotic translation initiation factor 3B family.; translation initiation factor 3B1 (TIF3B1); FUNCTIONS IN: nucleic acid binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytosol, eukaryotic translation initiation factor 3 complex, nucleus; EXPRESSED IN: guard cell, cultured cell, seed; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 2A, central region (InterPro:IPR013979), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Translation initiation factor eIF-3b (InterPro:IPR011400); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3B-2 (TAIR:AT5G25780.1); Has 966 Blast hits to 959 proteins in 251 species: Archae - 0; Bacteria - 19; Metazoa - 298; Fungi - 315; Plants - 111; Viruses - 6; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|37525 : 84.6) no description available & (reliability: 236.0) & (original description: Putative eIF5, Description = Eukaryotic translation initiation factor 3 subunit B, PFAM = )' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold3765_163838-169888' '(o81482|if4e2_maize : 265.0) Eukaryotic translation initiation factor 4E-2 (eIF4E-2) (eIF-4E-2) (mRNA cap-binding protein) (eIF-(iso)4F 25 kDa subunit) (eIF-(iso)4F p28 subunit) - Zea mays (Maize) & (gnl|cdd|85593 : 232.0) no description available & (at5g35620 : 226.0) Cap-binding protein, binds to the 5' cap structure of nuclear-encoded mRNAs. Mutant is resistant to potyvirus infection.; LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1 (LSP1); FUNCTIONS IN: RNA binding, RNA 7-methylguanosine cap binding, translation initiation factor activity; INVOLVED IN: translational initiation, response to virus; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 4E (eIF-4E) (InterPro:IPR001040), Eukaryotic translation initiation factor 4E (eIF-4E), conserved site (InterPro:IPR019770); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4E (TAIR:AT4G18040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36883 : 206.0) no description available & (reliability: 452.0) & (original description: Putative eIF(iso)4E, Description = Eukarytic translation initiation factor, PFAM = PF01652)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold5137_110265-125453' '(p35683|if4a_orysa : 462.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (at3g13920 : 454.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (gnl|cdd|35549 : 370.0) no description available & (gnl|cdd|30859 : 260.0) no description available & (reliability: 908.0) & (original description: Putative ifdA, Description = ATP-dependent RNA helicase eIF4A, PFAM = PF00270;PF00271)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold5478_28036-30863' '(gnl|cdd|69019 : 236.0) no description available & (gnl|cdd|36292 : 204.0) no description available & (q9xhm1|if38_medtr : 194.0) Eukaryotic translation initiation factor 3 subunit 8 (eIF3 p110) (eIF3c) - Medicago truncatula (Barrel medic) & (at3g56150 : 189.0) member of eIF3c - eukaryotic initiation factor 3c; eukaryotic translation initiation factor 3C (EIF3C); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Proteasome component (PCI) domain (InterPro:IPR000717), Eukaryotic translation initiation factor 3 subunit 8, N-terminal (InterPro:IPR008905); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3 subunit C2 (TAIR:AT3G22860.1). & (reliability: 378.0) & (original description: Putative eif3c, Description = Eukaryotic translation initiation factor 3 subunit C, PFAM = PF05470)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold6201_9792-15875' '(at1g66070 : 142.0) Translation initiation factor eIF3 subunit; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor eIF3 subunit (InterPro:IPR013906); BEST Arabidopsis thaliana protein match is: Translation initiation factor eIF3 subunit (TAIR:AT5G37475.1). & (gnl|cdd|72022 : 112.0) no description available & (gnl|cdd|40010 : 97.5) no description available & (reliability: 284.0) & (original description: Putative PHYPADRAFT_128429, Description = Predicted protein, PFAM = PF08597)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold7010_11954-22250' '(at5g19210 : 579.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G12770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30859 : 222.0) no description available & (gnl|cdd|35551 : 183.0) no description available & (p46942|db10_nicsy : 125.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1158.0) & (original description: Putative RH58, Description = DEAD-box ATP-dependent RNA helicase 58, chloroplastic, PFAM = PF00271;PF00270)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold7330_5213-16332' '(at2g40290 : 385.0) Eukaryotic translation initiation factor 2 subunit 1; FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Eukaryotic translation initiation factor 2, alpha subunit (InterPro:IPR011488); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 alpha subunit (TAIR:AT5G05470.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38127 : 321.0) no description available & (gnl|cdd|31290 : 177.0) no description available & (reliability: 770.0) & (original description: Putative tif211, Description = Eukaryotic translation initiation factor 2 subunit alpha, PFAM = PF00575;PF07541)' T '29.2.3' 'protein.synthesis.initiation' 'nbv0.5scaffold8259_7364-16000' '(at5g19210 : 236.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G12770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35551 : 145.0) no description available & (gnl|cdd|30859 : 125.0) no description available & (p46942|db10_nicsy : 100.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 472.0) & (original description: Putative VDL', Description = Putative chloroplast RNA helicase VDL' isoform 5, PFAM = PF00271;PF00270)' T '29.2.3' 'protein.synthesis.initiation' 'niben044scf00001874ctg005_7634-14619' '(at2g05830 : 428.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: cellular biosynthetic process, translational initiation, cellular metabolic process; LOCATED IN: endomembrane system, eukaryotic translation initiation factor 2B complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Putative translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase (InterPro:IPR005251), Initiation factor 2B related (InterPro:IPR000649), Initiation factor 2B alpha/beta/delta (InterPro:IPR011559); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT3G07300.3); Has 4761 Blast hits to 4761 proteins in 1019 species: Archae - 363; Bacteria - 1753; Metazoa - 515; Fungi - 379; Plants - 224; Viruses - 0; Other Eukaryotes - 1527 (source: NCBI BLink). & (gnl|cdd|36681 : 398.0) no description available & (gnl|cdd|30531 : 322.0) no description available & (reliability: 856.0) & (original description: Putative CIG2, Description = Methylthioribose-1-phosphate isomerase, PFAM = PF01008)' T '29.2.3' 'protein.synthesis.initiation' 'niben044scf00005084ctg026_1203-12864' '(at3g60240 : 641.0) protein synthesis initiation factor 4G (EIF4G). A mutation in this gene (cum2-1) results in decreased accumulation of CMV coat protein in upper, uninoculated leaves. Likely affects cell-to-cell movement of the virus, also affects TCV multiplication.; eukaryotic translation initiation factor 4G (EIF4G); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: response to virus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT5G57870.1); Has 9538 Blast hits to 7052 proteins in 555 species: Archae - 16; Bacteria - 1070; Metazoa - 4140; Fungi - 1856; Plants - 683; Viruses - 80; Other Eukaryotes - 1693 (source: NCBI BLink). & (gnl|cdd|35622 : 268.0) no description available & (gnl|cdd|86149 : 174.0) no description available & (q03387|if41_wheat : 172.0) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) - Triticum aestivum (Wheat) & (reliability: 1282.0) & (original description: Putative eIF4G, Description = Eukaryotic translation initiation factor 4 gamma 1, PFAM = PF02847;PF02854)' T '29.2.3' 'protein.synthesis.initiation' 'niben044scf00007954ctg000_6255-8864' '(q40470|if4a7_tobac : 350.0) Eukaryotic initiation factor 4A-7 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-7) (eIF-4A-7) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 338.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (gnl|cdd|35548 : 269.0) no description available & (gnl|cdd|28928 : 225.0) no description available & (reliability: 676.0) & (original description: Putative EIF4A1, Description = Eukaryotic initiation factor 4A-I, PFAM = PF00270)' T '29.2.3' 'protein.synthesis.initiation' 'niben044scf00012029ctg004_1599-10842' '(at1g10840 : 527.0) Encodes eukaryotic initiation factor 3H1 subunit (TIF3H1).; translation initiation factor 3 subunit H1 (TIF3H1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36773 : 279.0) no description available & (reliability: 1054.0) & (original description: Putative eIF3s3, Description = Eukaryotic translation initiation factor 3 subunit H, PFAM = PF01398)' T '29.2.3' 'protein.synthesis.initiation' 'niben044scf00013928ctg001_1-6490' '(at1g04170 : 834.0) protein synthesis initiation factor eIF2 gamma; eukaryotic translation initiation factor 2 gamma subunit (EIF2 GAMMA); CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Initiation factor eIF2 gamma, C-terminal (InterPro:IPR015256), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT4G18330.2); Has 29259 Blast hits to 29225 proteins in 6532 species: Archae - 651; Bacteria - 17093; Metazoa - 4832; Fungi - 574; Plants - 965; Viruses - 0; Other Eukaryotes - 5144 (source: NCBI BLink). & (gnl|cdd|35687 : 828.0) no description available & (gnl|cdd|34854 : 572.0) no description available & (q9tjq8|eftu_prowi : 88.2) Elongation factor Tu (EF-Tu) - Prototheca wickerhamii & (reliability: 1668.0) & (original description: Putative EIF2S3, Description = Eukaryotic translation initiation factor 2 subunit 3, PFAM = PF00009;PF09173;PF03144)' T '29.2.3' 'protein.synthesis.initiation' 'niben044scf00016243ctg019_31414-38441' '(q9xhm1|if38_medtr : 1034.0) Eukaryotic translation initiation factor 3 subunit 8 (eIF3 p110) (eIF3c) - Medicago truncatula (Barrel medic) & (at3g56150 : 1013.0) member of eIF3c - eukaryotic initiation factor 3c; eukaryotic translation initiation factor 3C (EIF3C); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Proteasome component (PCI) domain (InterPro:IPR000717), Eukaryotic translation initiation factor 3 subunit 8, N-terminal (InterPro:IPR008905); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3 subunit C2 (TAIR:AT3G22860.1). & (gnl|cdd|36292 : 966.0) no description available & (gnl|cdd|69019 : 776.0) no description available & (reliability: 2026.0) & (original description: Putative TIF3C1, Description = Eukaryotic translation initiation factor 3 subunit C, PFAM = PF05470;PF01399)' T '29.2.3' 'protein.synthesis.initiation' 'niben044scf00017307ctg014_11702-14844' '(at1g53900 : 271.0) Eukaryotic translation initiation factor 2B (eIF-2B) family protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649), Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Eukaryotic translation initiation factor 2B (eIF-2B) family protein (TAIR:AT1G53880.1); Has 4724 Blast hits to 4722 proteins in 1045 species: Archae - 373; Bacteria - 1754; Metazoa - 521; Fungi - 487; Plants - 467; Viruses - 0; Other Eukaryotes - 1122 (source: NCBI BLink). & (gnl|cdd|36679 : 230.0) no description available & (gnl|cdd|85181 : 136.0) no description available & (reliability: 542.0) & (original description: Putative GCN3, Description = Translation initiation factor eIF2B subunit alpha, PFAM = PF01008)' T '29.2.3' 'protein.synthesis.initiation' 'niben044scf00017543ctg003_5788-14485' '(at5g43810 : 1608.0) Encodes a member of the EIF2C (elongation initiation factor 2c)/ Argonaute class of proteins. Required to establish the central-peripheral organization of the embryo apex. Along with WUS and CLV genes, controls the relative organization of central zone and peripheral zone cells in meristems. Acts in embryonic provascular tissue potentiating WUSCHEL function during meristem development in the embryo.; ZWILLE (ZLL); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT1G48410.1). & (gnl|cdd|36259 : 846.0) no description available & (gnl|cdd|72942 : 561.0) no description available & (reliability: 3216.0) & (original description: Putative AGO10, Description = Protein argonaute 10, PFAM = PF16488;PF02170;PF16486;PF08699;PF02171;PF16487)' T '29.2.3' 'protein.synthesis.initiation' 'niben044scf00018073ctg013_271-3704' '(p48724|if5_phavu : 465.0) Eukaryotic translation initiation factor 5 (eIF-5) - Phaseolus vulgaris (Kidney bean) (French bean) & (at1g77840 : 429.0) Translation initiation factor IF2/IF5; FUNCTIONS IN: binding, translation initiation factor activity; INVOLVED IN: translational initiation, regulation of translational initiation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF2/IF5, N-terminal (InterPro:IPR016189), Translation initiation factor IF2/IF5, zinc-binding (InterPro:IPR016190), eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307), Translation initiation factor IF2/IF5 (InterPro:IPR002735), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF2/IF5 (TAIR:AT1G36730.1); Has 4597 Blast hits to 3869 proteins in 471 species: Archae - 198; Bacteria - 234; Metazoa - 1589; Fungi - 711; Plants - 391; Viruses - 12; Other Eukaryotes - 1462 (source: NCBI BLink). & (gnl|cdd|37978 : 345.0) no description available & (gnl|cdd|85734 : 148.0) no description available & (reliability: 858.0) & (original description: Putative eIF5, Description = Eukaryotic translation initiation factor 5, PFAM = PF01873;PF02020)' T '29.2.3' 'protein.synthesis.initiation' 'niben044scf00019236ctg007_1-9161' '(at5g42220 : 397.0) Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT5G25270.1); Has 12270 Blast hits to 6672 proteins in 779 species: Archae - 2; Bacteria - 272; Metazoa - 5255; Fungi - 1469; Plants - 2655; Viruses - 175; Other Eukaryotes - 2442 (source: NCBI BLink). & (gnl|cdd|39449 : 213.0) no description available & (gnl|cdd|29211 : 112.0) no description available & (reliability: 794.0) & (original description: Putative At5g42220, Description = AT5g42220/K5J14_2, PFAM = PF00240)' T '29.2.3' 'protein.synthesis.initiation' 'niben044scf00021592ctg002_4895-8000' '(at1g53900 : 150.0) Eukaryotic translation initiation factor 2B (eIF-2B) family protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649), Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Eukaryotic translation initiation factor 2B (eIF-2B) family protein (TAIR:AT1G53880.1); Has 4724 Blast hits to 4722 proteins in 1045 species: Archae - 373; Bacteria - 1754; Metazoa - 521; Fungi - 487; Plants - 467; Viruses - 0; Other Eukaryotes - 1122 (source: NCBI BLink). & (gnl|cdd|86676 : 149.0) no description available & (reliability: 300.0) & (original description: Putative At1g53870, Description = Initiation factor 2B-related protein, PFAM = PF04525)' T '29.2.3' 'protein.synthesis.initiation' 'niben044scf00028286ctg001_1-6438' '(o24473|if2b_wheat : 372.0) Eukaryotic translation initiation factor 2 subunit beta (eIF-2-beta) (P38) - Triticum aestivum (Wheat) & (at5g20920 : 352.0) protein synthesis initiation factor eIF2 beta; eukaryotic translation initiation factor 2 beta subunit (EIF2 BETA); FUNCTIONS IN: protein binding, translation initiation factor activity; INVOLVED IN: translational initiation, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF2/IF5, N-terminal (InterPro:IPR016189), Translation initiation factor IF2/IF5, zinc-binding (InterPro:IPR016190), Translation initiation factor IF2/IF5 (InterPro:IPR002735); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF2/IF5 (TAIR:AT3G07920.1); Has 1323 Blast hits to 1320 proteins in 358 species: Archae - 271; Bacteria - 0; Metazoa - 350; Fungi - 277; Plants - 186; Viruses - 4; Other Eukaryotes - 235 (source: NCBI BLink). & (gnl|cdd|37979 : 279.0) no description available & (gnl|cdd|85734 : 176.0) no description available & (reliability: 704.0) & (original description: Putative eIF2A, Description = Eukaryotic translation initiation factor 2 subunit 2, PFAM = PF01873)' T '29.2.3' 'protein.synthesis.initiation' 'niben044scf00032642ctg008_4161-10339' '(at3g57290 : 767.0) Encodes a protein that is found in not only the eif3 complex but also in association with subunits of the COP9 signalosome. eIF3e appears to be subjected to proteasome-dependent degradation that requires the PCI domain of eIF3e. The level of eIF3e present in cells appears to affect the rate of translation.; eukaryotic translation initiation factor 3E (EIF3E); FUNCTIONS IN: protein binding, translation initiation factor activity; INVOLVED IN: flower development, response to salt stress, translation, photomorphogenesis, transcription initiation; LOCATED IN: signalosome, eukaryotic translation initiation factor 3 complex, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor 3, subunit 6, eukaryotic (InterPro:IPR016650), Proteasome component (PCI) domain (InterPro:IPR000717), Eukaryotic translation initiation factor 3 (eIF3), subunit 6, N-terminal (InterPro:IPR019010); Has 641 Blast hits to 638 proteins in 243 species: Archae - 0; Bacteria - 2; Metazoa - 287; Fungi - 119; Plants - 138; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|37969 : 613.0) no description available & (gnl|cdd|87985 : 187.0) no description available & (reliability: 1534.0) & (original description: Putative TIF3E1, Description = Eukaryotic translation initiation factor 3 subunit E, PFAM = PF09440;PF01399)' T '29.2.3' 'protein.synthesis.initiation' 'niben044scf00034990ctg010_1-8700' '(at1g48410 : 1508.0) Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus.; ARGONAUTE 1 (AGO1); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT5G43810.2). & (gnl|cdd|36259 : 847.0) no description available & (gnl|cdd|72942 : 552.0) no description available & (reliability: 2730.0) & (original description: Putative AGO1A, Description = Protein argonaute 1A, PFAM = PF08699;PF12764;PF02171;PF16487;PF16488;PF02170;PF16486)' T '29.2.3' 'protein.synthesis.initiation' 'niben044scf00040906ctg001_1576-7463' '(p56821|if39_tobac : 1222.0) Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p110) (eIF3b) - Nicotiana tabacum (Common tobacco) & (at5g27640 : 1049.0) encodes a member of eukaryotic translation initiation factor 3B family.; translation initiation factor 3B1 (TIF3B1); FUNCTIONS IN: nucleic acid binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytosol, eukaryotic translation initiation factor 3 complex, nucleus; EXPRESSED IN: guard cell, cultured cell, seed; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 2A, central region (InterPro:IPR013979), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Translation initiation factor eIF-3b (InterPro:IPR011400); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3B-2 (TAIR:AT5G25780.1); Has 966 Blast hits to 959 proteins in 251 species: Archae - 0; Bacteria - 19; Metazoa - 298; Fungi - 315; Plants - 111; Viruses - 6; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|37525 : 625.0) no description available & (gnl|cdd|34929 : 285.0) no description available & (reliability: 2098.0) & (original description: Putative TIF3B1, Description = Eukaryotic translation initiation factor 3 subunit B, PFAM = PF00076;PF08662)' T '29.2.3' 'protein.synthesis.initiation' 'niben044scf00045823ctg007_1-6595' '(q9xhm1|if38_medtr : 1037.0) Eukaryotic translation initiation factor 3 subunit 8 (eIF3 p110) (eIF3c) - Medicago truncatula (Barrel medic) & (at3g56150 : 1014.0) member of eIF3c - eukaryotic initiation factor 3c; eukaryotic translation initiation factor 3C (EIF3C); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Proteasome component (PCI) domain (InterPro:IPR000717), Eukaryotic translation initiation factor 3 subunit 8, N-terminal (InterPro:IPR008905); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3 subunit C2 (TAIR:AT3G22860.1). & (gnl|cdd|36292 : 960.0) no description available & (gnl|cdd|69019 : 772.0) no description available & (reliability: 2028.0) & (original description: Putative TIF3C1, Description = Eukaryotic translation initiation factor 3 subunit C, PFAM = PF05470;PF01399)' T '29.2.3' 'protein.synthesis.initiation' 'niben044scf00050736ctg001_4444-12578' '(at5g19210 : 567.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G12770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30859 : 223.0) no description available & (gnl|cdd|35552 : 184.0) no description available & (p46942|db10_nicsy : 126.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1134.0) & (original description: Putative RH58, Description = DEAD-box ATP-dependent RNA helicase 58, chloroplastic, PFAM = PF00270;PF00271)' T '29.2.3' 'protein.synthesis.initiation' 'niben044scf00052524ctg002_4334-13045' '(gnl|cdd|69777 : 343.0) no description available & (at3g26400 : 226.0) member of eIF4B - eukaryotic initiation factor 4B; eukaryotic translation initiation factor 4B1 (EIF4B1); CONTAINS InterPro DOMAIN/s: Plant specific eukaryotic initiation factor 4B (InterPro:IPR010433); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4B2 (TAIR:AT1G13020.1); Has 19846 Blast hits to 11644 proteins in 926 species: Archae - 13; Bacteria - 5482; Metazoa - 6891; Fungi - 1262; Plants - 3241; Viruses - 222; Other Eukaryotes - 2735 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative EIF4B1, Description = Eukaryotic translation initiation factor 4B1, PFAM = PF06273;PF06273)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf00063_346699-350960' '(p69040|if5a1_tobac : 310.0) Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) (eIF-4D) - Nicotiana tabacum (Common tobacco) & (at1g13950 : 268.0) Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines, xylem formation is reduced.; eukaryotic elongation factor 5A-1 (ELF5A-1); FUNCTIONS IN: ribosome binding, RNA binding, translation elongation factor activity, translation initiation factor activity; INVOLVED IN: translational initiation, xylem development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation elongation factor, IF5A, hypusine site (InterPro:IPR019769), Translation protein SH3-like, subgroup (InterPro:IPR014722), Translation elongation factor, IF5A (InterPro:IPR001884), Translation elongation factor, IF5A C-terminal (InterPro:IPR020189), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-3 (TAIR:AT1G69410.1); Has 1356 Blast hits to 1355 proteins in 415 species: Archae - 264; Bacteria - 0; Metazoa - 366; Fungi - 246; Plants - 261; Viruses - 0; Other Eukaryotes - 219 (source: NCBI BLink). & (gnl|cdd|38481 : 230.0) no description available & (gnl|cdd|85363 : 87.2) no description available & (reliability: 536.0) & (original description: Putative EIF5A1, Description = Eukaryotic translation initiation factor 5A-1/2, PFAM = PF01287)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf00176_249815-256341' '(at1g11480 : 248.0) eukaryotic translation initiation factor-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 398 Blast hits to 374 proteins in 109 species: Archae - 0; Bacteria - 21; Metazoa - 180; Fungi - 52; Plants - 82; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 496.0) & (original description: Putative At1g11480, Description = At1g11480/T23J18_15, PFAM = )' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf00181_69467-80727' '(at1g76810 : 1009.0) eukaryotic translation initiation factor 2 (eIF-2) family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 (eIF-2) family protein (TAIR:AT1G76720.1); Has 208612 Blast hits to 135501 proteins in 4311 species: Archae - 1435; Bacteria - 54544; Metazoa - 70572; Fungi - 21896; Plants - 9806; Viruses - 724; Other Eukaryotes - 49635 (source: NCBI BLink). & (gnl|cdd|36359 : 1007.0) no description available & (gnl|cdd|81253 : 526.0) no description available & (p57997|if2c_phavu : 93.6) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 2018.0) & (original description: Putative EIF5B, Description = Translation initiation factor eIF-5B, PFAM = PF03144;PF00009;PF11987)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf00394_12035-16340' '(q40465|if411_tobac : 823.0) Eukaryotic initiation factor 4A-11 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-11) (eIF-4A-11) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 779.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (gnl|cdd|35549 : 572.0) no description available & (gnl|cdd|30859 : 376.0) no description available & (reliability: 1558.0) & (original description: Putative fal1, Description = ATP-dependent RNA helicase eIF4A, PFAM = PF00271;PF00270)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf00484_82007-90087' '(at5g18110 : 322.0) novel cap-binding protein (NCBP); FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 4E (eIF-4E) (InterPro:IPR001040), Eukaryotic translation initiation factor 4E (eIF-4E), conserved site (InterPro:IPR019770); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4E (TAIR:AT4G18040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36882 : 280.0) no description available & (gnl|cdd|85593 : 244.0) no description available & (o81481|if4e1_maize : 119.0) Eukaryotic translation initiation factor 4E-1 (eIF4E-1) (eIF-4E-1) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (eIF-4F p26 subunit) - Zea mays (Maize) & (reliability: 644.0) & (original description: Putative NCBP, Description = Eukaryotic translation initiation factor NCBP, PFAM = PF01652)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf00503_1113435-1116753' '(gnl|cdd|38613 : 192.0) no description available & (at5g35680 : 188.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation initiation factor 1A (eIF-1A), conserved site (InterPro:IPR018104), S1, IF1 type (InterPro:IPR006196), Translation initiation factor 1A (eIF-1A) (InterPro:IPR001253); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G04520.1). & (p47815|if1a_wheat : 176.0) Eukaryotic translation initiation factor 1A (EIF-1A) (EIF-4C) - Triticum aestivum (Wheat) & (gnl|cdd|47929 : 100.0) no description available & (reliability: 376.0) & (original description: Putative if1a, Description = Eukaryotic translation initiation factor 1A, PFAM = PF01176)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf00611_1137290-1141930' '(q40471|if4a9_tobac : 828.0) Eukaryotic initiation factor 4A-9 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-9) (eIF-4A-9) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 769.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (gnl|cdd|35548 : 569.0) no description available & (gnl|cdd|30859 : 380.0) no description available & (reliability: 1538.0) & (original description: Putative EIF4A2, Description = Eukaryotic initiation factor 4A-II, PFAM = PF00271;PF00270)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf00647_364684-369612' '(at3g11400 : 362.0) One of the 2 genes that code for the G subunit of eukaryotic initiation factor 3 (EIF3).; eukaryotic translation initiation factor 3G1 (EIF3G1); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Translation initiation factor 3, RNA-binding subunit (InterPro:IPR017334); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3G2 (TAIR:AT5G06000.1); Has 305 Blast hits to 280 proteins in 134 species: Archae - 2; Bacteria - 2; Metazoa - 144; Fungi - 81; Plants - 54; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|35344 : 294.0) no description available & (reliability: 724.0) & (original description: Putative eif3g, Description = Eukaryotic translation initiation factor 3 subunit G, PFAM = PF12353;PF00076)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf00713_20854-41653' '(q40554|if3a_tobac : 1261.0) Eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a) (PNLA-35) - Nicotiana tabacum (Common tobacco) & (at4g11420 : 948.0) Encodes a subunit of eukaryotic initiation factor 3 (eIF3), a multisubunit complex that is required for binding of mRNA to 40 S ribosomal subunits, stabilization of ternary complex binding to 40 S subunits, and dissociation of 40 and 60 S subunits.; eukaryotic translation initiation factor 3A (EIF3A); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: eukaryotic translation initiation factor 3 complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23330.1); Has 151795 Blast hits to 76455 proteins in 3156 species: Archae - 1231; Bacteria - 22686; Metazoa - 70860; Fungi - 11049; Plants - 6472; Viruses - 438; Other Eukaryotes - 39059 (source: NCBI BLink). & (gnl|cdd|37283 : 776.0) no description available & (reliability: 1896.0) & (original description: Putative TIF3A1, Description = Eukaryotic translation initiation factor 3 subunit A, PFAM = PF01399)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf00717_110166-113058' '(at1g63410 : 149.0) Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT3G14260.1); Has 268 Blast hits to 267 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 268; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86676 : 146.0) no description available & (reliability: 296.0) & (original description: Putative At1g53870, Description = Protein LURP-one-related 2, PFAM = PF04525)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf00863_265696-276665' '(gnl|cdd|36359 : 1006.0) no description available & (at1g76810 : 1002.0) eukaryotic translation initiation factor 2 (eIF-2) family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 (eIF-2) family protein (TAIR:AT1G76720.1); Has 208612 Blast hits to 135501 proteins in 4311 species: Archae - 1435; Bacteria - 54544; Metazoa - 70572; Fungi - 21896; Plants - 9806; Viruses - 724; Other Eukaryotes - 49635 (source: NCBI BLink). & (gnl|cdd|81253 : 526.0) no description available & (p57997|if2c_phavu : 94.0) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 2004.0) & (original description: Putative EIF5B, Description = Translation initiation factor eIF-5B, PFAM = PF03144;PF11987;PF00009)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf00870_1598207-1602578' '(p41381|if4a8_tobac : 820.0) Eukaryotic initiation factor 4A-8 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-8) (eIF-4A-8) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 757.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (gnl|cdd|35548 : 562.0) no description available & (gnl|cdd|30859 : 370.0) no description available & (reliability: 1514.0) & (original description: Putative ifdA, Description = ATP-dependent RNA helicase eIF4A, PFAM = PF00271;PF00270)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf00887_90513-99759' '(at1g48410 : 1504.0) Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus.; ARGONAUTE 1 (AGO1); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT5G43810.2). & (gnl|cdd|36259 : 863.0) no description available & (gnl|cdd|72942 : 568.0) no description available & (reliability: 2830.0) & (original description: Putative MEL1, Description = Protein argonaute MEL1, PFAM = PF02170;PF16487;PF02171;PF12764;PF16486;PF08699;PF16488)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf00962_449862-453256' '(at1g77840 : 465.0) Translation initiation factor IF2/IF5; FUNCTIONS IN: binding, translation initiation factor activity; INVOLVED IN: translational initiation, regulation of translational initiation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF2/IF5, N-terminal (InterPro:IPR016189), Translation initiation factor IF2/IF5, zinc-binding (InterPro:IPR016190), eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307), Translation initiation factor IF2/IF5 (InterPro:IPR002735), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF2/IF5 (TAIR:AT1G36730.1); Has 4597 Blast hits to 3869 proteins in 471 species: Archae - 198; Bacteria - 234; Metazoa - 1589; Fungi - 711; Plants - 391; Viruses - 12; Other Eukaryotes - 1462 (source: NCBI BLink). & (p48724|if5_phavu : 464.0) Eukaryotic translation initiation factor 5 (eIF-5) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|37978 : 355.0) no description available & (gnl|cdd|85734 : 151.0) no description available & (reliability: 930.0) & (original description: Putative eIF5, Description = Eukaryotic translation initiation factor 5, PFAM = PF02020;PF01873)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf01215_146251-149785' '(at4g27130 : 194.0) Translation initiation factor SUI1 family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, translation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor SUI1 (InterPro:IPR001950), Eukaryotic translation initiation factor SUI1 (InterPro:IPR005874); BEST Arabidopsis thaliana protein match is: Translation initiation factor SUI1 family protein (TAIR:AT5G54760.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p33278|sui1_orysa : 194.0) Protein translation factor SUI1 homolog (Protein GOS2) (Translational initiation factor 1) (Protein eIF1) - Oryza sativa (Rice) & (gnl|cdd|36981 : 153.0) no description available & (gnl|cdd|29592 : 86.0) no description available & (reliability: 388.0) & (original description: Putative eIF, Description = Eukaryotic translation initiation factor 1, PFAM = PF01253)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf01240_630382-638517' '(p55871|if2b_maldo : 384.0) Eukaryotic translation initiation factor 2 subunit beta (eIF-2-beta) - Malus domestica (Apple) (Malus sylvestris) & (at5g20920 : 362.0) protein synthesis initiation factor eIF2 beta; eukaryotic translation initiation factor 2 beta subunit (EIF2 BETA); FUNCTIONS IN: protein binding, translation initiation factor activity; INVOLVED IN: translational initiation, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF2/IF5, N-terminal (InterPro:IPR016189), Translation initiation factor IF2/IF5, zinc-binding (InterPro:IPR016190), Translation initiation factor IF2/IF5 (InterPro:IPR002735); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF2/IF5 (TAIR:AT3G07920.1); Has 1323 Blast hits to 1320 proteins in 358 species: Archae - 271; Bacteria - 0; Metazoa - 350; Fungi - 277; Plants - 186; Viruses - 4; Other Eukaryotes - 235 (source: NCBI BLink). & (gnl|cdd|37979 : 280.0) no description available & (gnl|cdd|85734 : 177.0) no description available & (reliability: 724.0) & (original description: Putative eIF2A, Description = Eukaryotic translation initiation factor 2 subunit 2, PFAM = PF01873)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf01269_844115-846450' '(at5g54940 : 177.0) Translation initiation factor SUI1 family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, translation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor SUI1 (InterPro:IPR001950), Eukaryotic translation initiation factor SUI1 (InterPro:IPR005874); BEST Arabidopsis thaliana protein match is: Translation initiation factor SUI1 family protein (TAIR:AT4G27130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p56330|sui1_maize : 171.0) Protein translation factor SUI1 homolog (Protein GOS2) - Zea mays (Maize) & (gnl|cdd|36981 : 142.0) no description available & (reliability: 354.0) & (original description: Putative SUI1A, Description = Protein translation factor SUI1, PFAM = PF01253)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf01382_161837-171068' '(at5g57870 : 790.0) Encodes a putative eukaryotic translation initiation factor.; eukaryotic translation Initiation Factor isoform 4G1 (eIFiso4G1); FUNCTIONS IN: RNA binding, binding, translation initiation factor activity; INVOLVED IN: translational initiation, translation, RNA metabolic process; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT2G24050.1); Has 2168 Blast hits to 1785 proteins in 242 species: Archae - 0; Bacteria - 22; Metazoa - 1155; Fungi - 192; Plants - 508; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (q03387|if41_wheat : 734.0) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) - Triticum aestivum (Wheat) & (gnl|cdd|35622 : 418.0) no description available & (gnl|cdd|86149 : 167.0) no description available & (reliability: 1580.0) & (original description: Putative eIF4, Description = Eukaryotic translation initiation factor 4G, PFAM = PF02847;PF02854)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf01382_281762-290935' '(at4g30690 : 233.0) Translation initiation factor 3 protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor 3, N-terminal (InterPro:IPR019814), Translation initiation factor 3, C-terminal (InterPro:IPR019815), Translation initiation factor 3 (InterPro:IPR001288); BEST Arabidopsis thaliana protein match is: Translation initiation factor 3 protein (TAIR:AT2G24060.1). & (gnl|cdd|80458 : 169.0) no description available & (reliability: 466.0) & (original description: Putative infC, Description = Translation initiation factor IF-3, PFAM = PF00707;PF05198)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf01520_970011-988411' '(at5g19210 : 241.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G12770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35551 : 145.0) no description available & (gnl|cdd|30859 : 126.0) no description available & (q41741|if4a_maize : 108.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Zea mays (Maize) & (reliability: 482.0) & (original description: Putative VDL', Description = Putative chloroplast RNA helicase VDL' isoform 5, PFAM = PF00271;PF00270)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf01571_422784-434648' '(at1g48410 : 1566.0) Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus.; ARGONAUTE 1 (AGO1); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT5G43810.2). & (gnl|cdd|36259 : 859.0) no description available & (gnl|cdd|72942 : 568.0) no description available & (reliability: 2868.0) & (original description: Putative AGO1A, Description = Protein argonaute 1A, PFAM = PF12764;PF08699;PF16488;PF16486;PF02170;PF16487;PF02171)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf01571_430788-434558' '(at1g48410 : 239.0) Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus.; ARGONAUTE 1 (AGO1); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT5G43810.2). & (gnl|cdd|72942 : 195.0) no description available & (gnl|cdd|36259 : 165.0) no description available & (reliability: 450.0) & (original description: Putative ago2, Description = Protein argonaute 1A, PFAM = PF02171;PF02171)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf01576_58525-62079' '(at2g40780 : 172.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), S1, IF1 type (InterPro:IPR006196), Translation initiation factor 1A (eIF-1A) (InterPro:IPR001253); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38136 : 128.0) no description available & (reliability: 344.0) & (original description: Putative BnaA04g23520D, Description = BnaA04g23520D protein, PFAM = PF01176)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf01640_206718-209600' '(p48724|if5_phavu : 471.0) Eukaryotic translation initiation factor 5 (eIF-5) - Phaseolus vulgaris (Kidney bean) (French bean) & (at1g77840 : 414.0) Translation initiation factor IF2/IF5; FUNCTIONS IN: binding, translation initiation factor activity; INVOLVED IN: translational initiation, regulation of translational initiation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF2/IF5, N-terminal (InterPro:IPR016189), Translation initiation factor IF2/IF5, zinc-binding (InterPro:IPR016190), eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307), Translation initiation factor IF2/IF5 (InterPro:IPR002735), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF2/IF5 (TAIR:AT1G36730.1); Has 4597 Blast hits to 3869 proteins in 471 species: Archae - 198; Bacteria - 234; Metazoa - 1589; Fungi - 711; Plants - 391; Viruses - 12; Other Eukaryotes - 1462 (source: NCBI BLink). & (gnl|cdd|37978 : 356.0) no description available & (gnl|cdd|85734 : 150.0) no description available & (reliability: 828.0) & (original description: Putative EIF5, Description = Eukaryotic translation initiation factor 5, PFAM = PF01873;PF02020)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf01669_500416-506594' '(at5g18110 : 332.0) novel cap-binding protein (NCBP); FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 4E (eIF-4E) (InterPro:IPR001040), Eukaryotic translation initiation factor 4E (eIF-4E), conserved site (InterPro:IPR019770); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4E (TAIR:AT4G18040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36882 : 289.0) no description available & (gnl|cdd|85593 : 252.0) no description available & (o81481|if4e1_maize : 122.0) Eukaryotic translation initiation factor 4E-1 (eIF4E-1) (eIF-4E-1) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (eIF-4F p26 subunit) - Zea mays (Maize) & (reliability: 664.0) & (original description: Putative NCBP, Description = Eukaryotic translation initiation factor NCBP, PFAM = PF01652)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf01681_988191-1000326' '(at1g73180 : 662.0) Eukaryotic translation initiation factor eIF2A family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Eukaryotic translation initiation factor 2A, central region (InterPro:IPR013979), Translation initiation factor eIF-2A (InterPro:IPR011387), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943); BEST Arabidopsis thaliana protein match is: translation initiation factor 3B1 (TAIR:AT5G27640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37526 : 462.0) no description available & (gnl|cdd|72087 : 285.0) no description available & (p56821|if39_tobac : 83.2) Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p110) (eIF3b) - Nicotiana tabacum (Common tobacco) & (reliability: 1324.0) & (original description: Putative eIF2A, Description = Eukaryotic translation initiation factor 2A, PFAM = PF08662)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf01681_989537-1000441' '(at1g73180 : 375.0) Eukaryotic translation initiation factor eIF2A family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Eukaryotic translation initiation factor 2A, central region (InterPro:IPR013979), Translation initiation factor eIF-2A (InterPro:IPR011387), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943); BEST Arabidopsis thaliana protein match is: translation initiation factor 3B1 (TAIR:AT5G27640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37526 : 294.0) no description available & (gnl|cdd|72087 : 244.0) no description available & (reliability: 750.0) & (original description: Putative eIF2A, Description = Eukaryotic translation initiation factor 2A, PFAM = PF08662)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf01695_702590-708269' '(at1g04170 : 842.0) protein synthesis initiation factor eIF2 gamma; eukaryotic translation initiation factor 2 gamma subunit (EIF2 GAMMA); CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Initiation factor eIF2 gamma, C-terminal (InterPro:IPR015256), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT4G18330.2); Has 29259 Blast hits to 29225 proteins in 6532 species: Archae - 651; Bacteria - 17093; Metazoa - 4832; Fungi - 574; Plants - 965; Viruses - 0; Other Eukaryotes - 5144 (source: NCBI BLink). & (gnl|cdd|35687 : 825.0) no description available & (gnl|cdd|34854 : 569.0) no description available & (q9tjq8|eftu_prowi : 91.3) Elongation factor Tu (EF-Tu) - Prototheca wickerhamii & (reliability: 1684.0) & (original description: Putative eIF2g, Description = Eukaryotic translation initiation factor 2 subunit gamma, PFAM = PF03144;PF00009;PF09173)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf01699_63637-73320' '(at5g11900 : 263.0) Translation initiation factor SUI1 family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor SUI1 (InterPro:IPR001950), Density-regulated protein DRP1 (InterPro:IPR005873); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38449 : 176.0) no description available & (reliability: 526.0) & (original description: Putative SUI1B, Description = Translation initiation factor SUI1 family protein, PFAM = PF01253)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf01717_552584-558141' '(q40467|if414_tobac : 823.0) Eukaryotic initiation factor 4A-14 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-14) (eIF-4A-14) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 779.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (gnl|cdd|35548 : 573.0) no description available & (gnl|cdd|30859 : 377.0) no description available & (reliability: 1558.0) & (original description: Putative fal1, Description = ATP-dependent RNA helicase eIF4A, PFAM = PF00270;PF00271)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf01745_541387-553339' '(at3g60240 : 644.0) protein synthesis initiation factor 4G (EIF4G). A mutation in this gene (cum2-1) results in decreased accumulation of CMV coat protein in upper, uninoculated leaves. Likely affects cell-to-cell movement of the virus, also affects TCV multiplication.; eukaryotic translation initiation factor 4G (EIF4G); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: response to virus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT5G57870.1); Has 9538 Blast hits to 7052 proteins in 555 species: Archae - 16; Bacteria - 1070; Metazoa - 4140; Fungi - 1856; Plants - 683; Viruses - 80; Other Eukaryotes - 1693 (source: NCBI BLink). & (gnl|cdd|35622 : 262.0) no description available & (q03387|if41_wheat : 173.0) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) - Triticum aestivum (Wheat) & (gnl|cdd|86149 : 171.0) no description available & (reliability: 1288.0) & (original description: Putative eIF4G, Description = Eukaryotic translation initiation factor 4 gamma 1, PFAM = PF02847;PF02854)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf01817_298759-306468' '(at4g11160 : 842.0) Translation initiation factor 2, small GTP-binding protein; FUNCTIONS IN: GTP binding, GTPase activity, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation initiation factor 2 related (InterPro:IPR015760), Initiation factor 2 (InterPro:IPR000178), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation initiation factor 2, small GTP-binding protein (TAIR:AT1G17220.1); Has 56805 Blast hits to 56771 proteins in 4188 species: Archae - 1161; Bacteria - 37207; Metazoa - 1733; Fungi - 1367; Plants - 871; Viruses - 1; Other Eukaryotes - 14465 (source: NCBI BLink). & (gnl|cdd|36360 : 672.0) no description available & (gnl|cdd|81514 : 622.0) no description available & (p57997|if2c_phavu : 334.0) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1684.0) & (original description: Putative infB, Description = Translation initiation factor IF-2, PFAM = PF11987;PF00009)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf02031_69319-74163' '(q40468|if415_tobac : 750.0) Eukaryotic initiation factor 4A-15 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-15) (eIF-4A-15) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 699.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (gnl|cdd|35548 : 511.0) no description available & (gnl|cdd|30859 : 339.0) no description available & (reliability: 1398.0) & (original description: Putative fal1, Description = ATP-dependent RNA helicase eIF4A, PFAM = PF00270;PF00271)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf02060_382341-388825' '(at1g04170 : 836.0) protein synthesis initiation factor eIF2 gamma; eukaryotic translation initiation factor 2 gamma subunit (EIF2 GAMMA); CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Initiation factor eIF2 gamma, C-terminal (InterPro:IPR015256), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT4G18330.2); Has 29259 Blast hits to 29225 proteins in 6532 species: Archae - 651; Bacteria - 17093; Metazoa - 4832; Fungi - 574; Plants - 965; Viruses - 0; Other Eukaryotes - 5144 (source: NCBI BLink). & (gnl|cdd|35687 : 830.0) no description available & (gnl|cdd|34854 : 574.0) no description available & (q9tjq8|eftu_prowi : 88.2) Elongation factor Tu (EF-Tu) - Prototheca wickerhamii & (reliability: 1672.0) & (original description: Putative EIF2S3, Description = Eukaryotic translation initiation factor 2 subunit 3, PFAM = PF00009;PF03144;PF09173)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf02148_65471-68892' '(at1g63410 : 150.0) Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT3G14260.1); Has 268 Blast hits to 267 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 268; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86676 : 149.0) no description available & (reliability: 278.0) & (original description: Putative At1g63410, Description = Protein LURP-one-related 4, PFAM = PF04525)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf02638_464323-484375' '(o81481|if4e1_maize : 310.0) Eukaryotic translation initiation factor 4E-1 (eIF4E-1) (eIF-4E-1) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (eIF-4F p26 subunit) - Zea mays (Maize) & (at4g18040 : 291.0) eIF4E protein. The cum1 mutation affects the local spreading of CMV within the inoculated leaf, delaying accumulation of cucumber mosaic virus coat protein.; eukaryotic translation initiation factor 4E (EIF4E); CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 4E (eIF-4E) (InterPro:IPR001040), Eukaryotic translation initiation factor 4E (eIF-4E), conserved site (InterPro:IPR019770); BEST Arabidopsis thaliana protein match is: Eukaryotic initiation factor 4E protein (TAIR:AT1G29550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85593 : 262.0) no description available & (gnl|cdd|36883 : 225.0) no description available & (reliability: 582.0) & (original description: Putative eIF4E, Description = Eukaryotic translation initiation factor 4E, PFAM = PF01652)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf02880_65977-72836' '(o81481|if4e1_maize : 280.0) Eukaryotic translation initiation factor 4E-1 (eIF4E-1) (eIF-4E-1) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (eIF-4F p26 subunit) - Zea mays (Maize) & (at4g18040 : 272.0) eIF4E protein. The cum1 mutation affects the local spreading of CMV within the inoculated leaf, delaying accumulation of cucumber mosaic virus coat protein.; eukaryotic translation initiation factor 4E (EIF4E); CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 4E (eIF-4E) (InterPro:IPR001040), Eukaryotic translation initiation factor 4E (eIF-4E), conserved site (InterPro:IPR019770); BEST Arabidopsis thaliana protein match is: Eukaryotic initiation factor 4E protein (TAIR:AT1G29550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85593 : 241.0) no description available & (gnl|cdd|36883 : 219.0) no description available & (reliability: 544.0) & (original description: Putative eIF4E, Description = Eukaryotic translation initiation factor 4E, PFAM = PF01652)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf03143_1223916-1238679' '(gnl|cdd|69777 : 303.0) no description available & (at3g26400 : 180.0) member of eIF4B - eukaryotic initiation factor 4B; eukaryotic translation initiation factor 4B1 (EIF4B1); CONTAINS InterPro DOMAIN/s: Plant specific eukaryotic initiation factor 4B (InterPro:IPR010433); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4B2 (TAIR:AT1G13020.1); Has 19846 Blast hits to 11644 proteins in 926 species: Archae - 13; Bacteria - 5482; Metazoa - 6891; Fungi - 1262; Plants - 3241; Viruses - 222; Other Eukaryotes - 2735 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative SNS, Description = Eukaryotic translation initiation factor 4B1, PFAM = PF06273;PF06273;PF06273)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf03166_39888-44668' '(p56333|if5a1_soltu : 301.0) Eukaryotic translation initiation factor 5A-1/2 (eIF-5A-1/2) (eIF-4D) - Solanum tuberosum (Potato) & (at1g13950 : 267.0) Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines, xylem formation is reduced.; eukaryotic elongation factor 5A-1 (ELF5A-1); FUNCTIONS IN: ribosome binding, RNA binding, translation elongation factor activity, translation initiation factor activity; INVOLVED IN: translational initiation, xylem development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation elongation factor, IF5A, hypusine site (InterPro:IPR019769), Translation protein SH3-like, subgroup (InterPro:IPR014722), Translation elongation factor, IF5A (InterPro:IPR001884), Translation elongation factor, IF5A C-terminal (InterPro:IPR020189), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-3 (TAIR:AT1G69410.1); Has 1356 Blast hits to 1355 proteins in 415 species: Archae - 264; Bacteria - 0; Metazoa - 366; Fungi - 246; Plants - 261; Viruses - 0; Other Eukaryotes - 219 (source: NCBI BLink). & (gnl|cdd|38481 : 230.0) no description available & (gnl|cdd|30580 : 87.5) no description available & (reliability: 534.0) & (original description: Putative EIF5A1, Description = Eukaryotic translation initiation factor 5A-1/2, PFAM = PF01287)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf03262_192849-199513' '(p56335|if5a3_soltu : 304.0) Eukaryotic translation initiation factor 5A-3 (eIF-5A-3) (eIF-4D) - Solanum tuberosum (Potato) & (at1g13950 : 267.0) Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines, xylem formation is reduced.; eukaryotic elongation factor 5A-1 (ELF5A-1); FUNCTIONS IN: ribosome binding, RNA binding, translation elongation factor activity, translation initiation factor activity; INVOLVED IN: translational initiation, xylem development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation elongation factor, IF5A, hypusine site (InterPro:IPR019769), Translation protein SH3-like, subgroup (InterPro:IPR014722), Translation elongation factor, IF5A (InterPro:IPR001884), Translation elongation factor, IF5A C-terminal (InterPro:IPR020189), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-3 (TAIR:AT1G69410.1); Has 1356 Blast hits to 1355 proteins in 415 species: Archae - 264; Bacteria - 0; Metazoa - 366; Fungi - 246; Plants - 261; Viruses - 0; Other Eukaryotes - 219 (source: NCBI BLink). & (gnl|cdd|38481 : 227.0) no description available & (gnl|cdd|30580 : 88.3) no description available & (reliability: 534.0) & (original description: Putative EIF5A1, Description = Eukaryotic translation initiation factor 5A-1/2, PFAM = PF01287)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf03374_1009942-1013860' '(at3g14260 : 167.0) Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT1G53890.1); Has 295 Blast hits to 292 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86676 : 146.0) no description available & (reliability: 312.0) & (original description: Putative At3g14260, Description = Protein LURP-one-related 11, PFAM = PF04525)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf03412_578127-589818' '(at2g40290 : 469.0) Eukaryotic translation initiation factor 2 subunit 1; FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Eukaryotic translation initiation factor 2, alpha subunit (InterPro:IPR011488); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 alpha subunit (TAIR:AT5G05470.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38127 : 394.0) no description available & (gnl|cdd|31290 : 231.0) no description available & (reliability: 938.0) & (original description: Putative tif211, Description = Eukaryotic translation initiation factor 2 subunit alpha, PFAM = PF07541;PF00575)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf03473_147198-157217' '(at2g46290 : 550.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TGF-beta receptor interacting protein 1 (TAIR:AT2G46280.2); Has 51915 Blast hits to 23729 proteins in 705 species: Archae - 52; Bacteria - 7544; Metazoa - 20576; Fungi - 11592; Plants - 5771; Viruses - 0; Other Eukaryotes - 6380 (source: NCBI BLink). & (gnl|cdd|35862 : 486.0) no description available & (gnl|cdd|29257 : 161.0) no description available & (reliability: 1100.0) & (original description: Putative eIF7, Description = Eukaryotic translation initiation factor 3 subunit I, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf03778_172195-176555' '(q40471|if4a9_tobac : 535.0) Eukaryotic initiation factor 4A-9 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-9) (eIF-4A-9) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 525.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (gnl|cdd|35549 : 428.0) no description available & (gnl|cdd|30859 : 285.0) no description available & (reliability: 1050.0) & (original description: Putative fal1, Description = ATP-dependent RNA helicase eIF4A, PFAM = PF00270;PF00271)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf03790_105601-118753' '(at5g57870 : 802.0) Encodes a putative eukaryotic translation initiation factor.; eukaryotic translation Initiation Factor isoform 4G1 (eIFiso4G1); FUNCTIONS IN: RNA binding, binding, translation initiation factor activity; INVOLVED IN: translational initiation, translation, RNA metabolic process; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT2G24050.1); Has 2168 Blast hits to 1785 proteins in 242 species: Archae - 0; Bacteria - 22; Metazoa - 1155; Fungi - 192; Plants - 508; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (q03387|if41_wheat : 768.0) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) - Triticum aestivum (Wheat) & (gnl|cdd|35622 : 422.0) no description available & (gnl|cdd|86149 : 164.0) no description available & (reliability: 1604.0) & (original description: Putative eIF4, Description = Eukaryotic translation initiation factor isoform 4G-1, PFAM = PF02854;PF02847)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf03814_56183-63537' '(at5g43810 : 1351.0) Encodes a member of the EIF2C (elongation initiation factor 2c)/ Argonaute class of proteins. Required to establish the central-peripheral organization of the embryo apex. Along with WUS and CLV genes, controls the relative organization of central zone and peripheral zone cells in meristems. Acts in embryonic provascular tissue potentiating WUSCHEL function during meristem development in the embryo.; ZWILLE (ZLL); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT1G48410.1). & (gnl|cdd|36259 : 794.0) no description available & (gnl|cdd|72942 : 563.0) no description available & (reliability: 2702.0) & (original description: Putative PHN1, Description = Protein argonaute PNH1, PFAM = PF16486;PF16487;PF08699;PF16488;PF02171;PF02170)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf03823_274131-279965' '(at1g53900 : 579.0) Eukaryotic translation initiation factor 2B (eIF-2B) family protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649), Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Eukaryotic translation initiation factor 2B (eIF-2B) family protein (TAIR:AT1G53880.1); Has 4724 Blast hits to 4722 proteins in 1045 species: Archae - 373; Bacteria - 1754; Metazoa - 521; Fungi - 487; Plants - 467; Viruses - 0; Other Eukaryotes - 1122 (source: NCBI BLink). & (gnl|cdd|36679 : 457.0) no description available & (gnl|cdd|85181 : 231.0) no description available & (reliability: 1158.0) & (original description: Putative eif2b1, Description = Translation initiation factor eIF-2B subunit alpha, PFAM = PF01008)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf04073_13051-16178' '(p33278|sui1_orysa : 201.0) Protein translation factor SUI1 homolog (Protein GOS2) (Translational initiation factor 1) (Protein eIF1) - Oryza sativa (Rice) & (at1g54290 : 194.0) Translation initiation factor SUI1 family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, translation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor SUI1 (InterPro:IPR001950), Eukaryotic translation initiation factor SUI1 (InterPro:IPR005874); BEST Arabidopsis thaliana protein match is: Translation initiation factor SUI1 family protein (TAIR:AT4G27130.1); Has 846 Blast hits to 843 proteins in 268 species: Archae - 14; Bacteria - 1; Metazoa - 362; Fungi - 162; Plants - 197; Viruses - 5; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|36981 : 156.0) no description available & (gnl|cdd|29592 : 88.0) no description available & (reliability: 388.0) & (original description: Putative GOS2, Description = Protein translation factor SUI1 homolog, PFAM = PF01253)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf04077_846346-850521' '(p24922|if5a2_nicpl : 308.0) Eukaryotic translation initiation factor 5A-2 (eIF-5A-2) (eIF-4D) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g69410 : 272.0) Encodes eIF5A-2, a putative eukaryotic translation initiation factor. There are three eIF5A coding genes in Arabidopsis: eIF5A-1/At1g13950, eIF5A-2/At1g26630 and eIF5A-3/At1g69410.; eukaryotic elongation factor 5A-3 (ELF5A-3); FUNCTIONS IN: ribosome binding, RNA binding, translation elongation factor activity, translation initiation factor activity; INVOLVED IN: translational initiation, translational frameshifting, positive regulation of translational termination, peptidyl-lysine modification to hypusine, positive regulation of translational elongation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation elongation factor, IF5A, hypusine site (InterPro:IPR019769), Translation protein SH3-like, subgroup (InterPro:IPR014722), Translation elongation factor, IF5A (InterPro:IPR001884), Translation elongation factor, IF5A C-terminal (InterPro:IPR020189), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-1 (TAIR:AT1G13950.1); Has 1331 Blast hits to 1330 proteins in 408 species: Archae - 255; Bacteria - 0; Metazoa - 363; Fungi - 252; Plants - 260; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (gnl|cdd|38481 : 232.0) no description available & (gnl|cdd|30580 : 90.2) no description available & (reliability: 544.0) & (original description: Putative ANB1, Description = Eukaryotic translation initiation factor 5A, PFAM = PF01287)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf04185_325399-350592' '(at3g07300 : 576.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT2G44070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36678 : 400.0) no description available & (gnl|cdd|85181 : 193.0) no description available & (reliability: 1152.0) & (original description: Putative eif2Bb, Description = Eukaryotic translation initiation factor 2B beta, PFAM = PF01008)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf04194_59905-65647' '(gnl|cdd|35687 : 676.0) no description available & (at1g04170 : 611.0) protein synthesis initiation factor eIF2 gamma; eukaryotic translation initiation factor 2 gamma subunit (EIF2 GAMMA); CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Initiation factor eIF2 gamma, C-terminal (InterPro:IPR015256), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT4G18330.2); Has 29259 Blast hits to 29225 proteins in 6532 species: Archae - 651; Bacteria - 17093; Metazoa - 4832; Fungi - 574; Plants - 965; Viruses - 0; Other Eukaryotes - 5144 (source: NCBI BLink). & (gnl|cdd|34854 : 513.0) no description available & (reliability: 1222.0) & (original description: Putative eIF2g, Description = Eukaryotic translation initiation factor 2 subunit gamma, PFAM = PF09173;PF03144;PF00009)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf04225_303654-312814' '(at1g17220 : 1003.0) Encodes a chloroplast localized protein with similarity to translation initiation factor 2. Can complement loss of INFB in E.coli suggesting FUG1 does function as a translation initiation factor in vivo. Identified as a suppressor of the leaf variegation mutant var2-6. Suppression is only seen in hypomorphs as complete loss of function alleles are embryo lethal.; fu-gaeri1 (FUG1); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF-2, N-terminal (InterPro:IPR006847), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Initiation factor 2 (InterPro:IPR000178), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation initiation factor 2, small GTP-binding protein (TAIR:AT4G11160.1); Has 64472 Blast hits to 64325 proteins in 4737 species: Archae - 1215; Bacteria - 42273; Metazoa - 2198; Fungi - 2344; Plants - 1110; Viruses - 4; Other Eukaryotes - 15328 (source: NCBI BLink). & (p57997|if2c_phavu : 989.0) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|81514 : 753.0) no description available & (gnl|cdd|36360 : 699.0) no description available & (reliability: 2006.0) & (original description: Putative IF2CP, Description = Translation initiation factor IF-2, chloroplastic, PFAM = PF11987;PF00009)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf04325_146900-158234' '(at2g05830 : 513.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: cellular biosynthetic process, translational initiation, cellular metabolic process; LOCATED IN: endomembrane system, eukaryotic translation initiation factor 2B complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Putative translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase (InterPro:IPR005251), Initiation factor 2B related (InterPro:IPR000649), Initiation factor 2B alpha/beta/delta (InterPro:IPR011559); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT3G07300.3); Has 4761 Blast hits to 4761 proteins in 1019 species: Archae - 363; Bacteria - 1753; Metazoa - 515; Fungi - 379; Plants - 224; Viruses - 0; Other Eukaryotes - 1527 (source: NCBI BLink). & (gnl|cdd|36681 : 482.0) no description available & (gnl|cdd|30531 : 389.0) no description available & (reliability: 1026.0) & (original description: Putative CIG2, Description = Methylthioribose-1-phosphate isomerase, PFAM = PF01008)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf04339_149165-152214' '(p33278|sui1_orysa : 199.0) Protein translation factor SUI1 homolog (Protein GOS2) (Translational initiation factor 1) (Protein eIF1) - Oryza sativa (Rice) & (at4g27130 : 190.0) Translation initiation factor SUI1 family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, translation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor SUI1 (InterPro:IPR001950), Eukaryotic translation initiation factor SUI1 (InterPro:IPR005874); BEST Arabidopsis thaliana protein match is: Translation initiation factor SUI1 family protein (TAIR:AT5G54760.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36981 : 151.0) no description available & (gnl|cdd|29592 : 85.3) no description available & (reliability: 380.0) & (original description: Putative sui1, Description = SUI1 protein, PFAM = PF01253)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf04377_3850-12906' '(at1g17220 : 1017.0) Encodes a chloroplast localized protein with similarity to translation initiation factor 2. Can complement loss of INFB in E.coli suggesting FUG1 does function as a translation initiation factor in vivo. Identified as a suppressor of the leaf variegation mutant var2-6. Suppression is only seen in hypomorphs as complete loss of function alleles are embryo lethal.; fu-gaeri1 (FUG1); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF-2, N-terminal (InterPro:IPR006847), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Initiation factor 2 (InterPro:IPR000178), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation initiation factor 2, small GTP-binding protein (TAIR:AT4G11160.1); Has 64472 Blast hits to 64325 proteins in 4737 species: Archae - 1215; Bacteria - 42273; Metazoa - 2198; Fungi - 2344; Plants - 1110; Viruses - 4; Other Eukaryotes - 15328 (source: NCBI BLink). & (p57997|if2c_phavu : 1003.0) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|81514 : 750.0) no description available & (gnl|cdd|36360 : 697.0) no description available & (reliability: 2034.0) & (original description: Putative fliN, Description = Translation initiation factor IF-2, PFAM = PF00009;PF11987)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf04396_55661-106122' '(at2g34970 : 844.0) Trimeric LpxA-like enzyme; FUNCTIONS IN: binding, transferase activity, translation initiation factor activity, nucleotidyltransferase activity; INVOLVED IN: biosynthetic process, regulation of translational initiation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307), Armadillo-type fold (InterPro:IPR016024), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Trimeric LpxA-like enzyme (TAIR:AT4G18300.1); Has 8121 Blast hits to 7961 proteins in 1548 species: Archae - 574; Bacteria - 3735; Metazoa - 1296; Fungi - 469; Plants - 387; Viruses - 0; Other Eukaryotes - 1660 (source: NCBI BLink). & (gnl|cdd|36674 : 704.0) no description available & (gnl|cdd|31401 : 162.0) no description available & (reliability: 1688.0) & (original description: Putative At2g34970, Description = At2g34970, PFAM = PF00132;PF00132;PF00483;PF02020)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf04825_258737-268577' '(at5g36230 : 634.0) ARM repeat superfamily protein; FUNCTIONS IN: binding, translation initiation factor activity; INVOLVED IN: regulation of translational initiation; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G65220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37508 : 544.0) no description available & (gnl|cdd|47818 : 88.8) no description available & (reliability: 1268.0) & (original description: Putative gpm710, Description = Eukaryotic initiation factor 5C CG2922-PF, isoform F, PFAM = PF02020)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf04862_122859-132746' '(gnl|cdd|69777 : 351.0) no description available & (at3g26400 : 202.0) member of eIF4B - eukaryotic initiation factor 4B; eukaryotic translation initiation factor 4B1 (EIF4B1); CONTAINS InterPro DOMAIN/s: Plant specific eukaryotic initiation factor 4B (InterPro:IPR010433); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4B2 (TAIR:AT1G13020.1); Has 19846 Blast hits to 11644 proteins in 926 species: Archae - 13; Bacteria - 5482; Metazoa - 6891; Fungi - 1262; Plants - 3241; Viruses - 222; Other Eukaryotes - 2735 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative EIF4B2, Description = Eukaryotic translation initiation factor 4B2, PFAM = PF06273;PF06273)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf04899_617551-621278' '(at4g20980 : 809.0) Eukaryotic translation initiation factor 3 subunit 7 (eIF-3); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 3, subunit 7 (InterPro:IPR007783); BEST Arabidopsis thaliana protein match is: Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) (TAIR:AT5G44320.1). & (gnl|cdd|37690 : 744.0) no description available & (gnl|cdd|68656 : 709.0) no description available & (reliability: 1618.0) & (original description: Putative eif3D, Description = Eukaryotic translation initiation factor 3 subunit 7, PFAM = PF05091)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf04910_550885-559426' '(q94hf1|if3c_orysa : 356.0) Eukaryotic translation initiation factor 3 subunit 12 (eIF-3 p25) (eIF3k) - Oryza sativa (Rice) & (at4g33250 : 342.0) Encodes initiation factor 3k (EIF3k).; eukaryotic translation initiation factor 3K (EIF3K); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, regulation of translational initiation; LOCATED IN: eukaryotic translation initiation factor 3 complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Translation initiation factor 3, subunit 12, N-terminal, eukaryotic (InterPro:IPR016020), Translation initiation factor 3, subunit 12, eukaryotic (InterPro:IPR009374), Armadillo-type fold (InterPro:IPR016024), SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); Has 423 Blast hits to 423 proteins in 172 species: Archae - 0; Bacteria - 0; Metazoa - 186; Fungi - 100; Plants - 89; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|38462 : 246.0) no description available & (gnl|cdd|67037 : 86.9) no description available & (reliability: 684.0) & (original description: Putative TIF3K1, Description = Eukaryotic translation initiation factor 3 subunit K, PFAM = PF10075)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf05217_28737-48042' '(at3g07300 : 574.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT2G44070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36678 : 401.0) no description available & (gnl|cdd|85181 : 195.0) no description available & (reliability: 1148.0) & (original description: Putative eif2b2, Description = Translation initiation factor eIF-2B subunit beta, PFAM = PF01008)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf05217_28743-56099' '(at3g07300 : 401.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT2G44070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36678 : 300.0) no description available & (gnl|cdd|85181 : 151.0) no description available & (reliability: 802.0) & (original description: Putative eif2Bb, Description = Translation initiation factor eIF-2B subunit beta, PFAM = PF01008)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf05332_113825-126360' '(at5g42220 : 431.0) Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT5G25270.1); Has 12270 Blast hits to 6672 proteins in 779 species: Archae - 2; Bacteria - 272; Metazoa - 5255; Fungi - 1469; Plants - 2655; Viruses - 175; Other Eukaryotes - 2442 (source: NCBI BLink). & (gnl|cdd|39449 : 219.0) no description available & (gnl|cdd|29211 : 111.0) no description available & (reliability: 862.0) & (original description: Putative At5g42220, Description = AT5g42220/K5J14_2, PFAM = PF00240)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf05411_223784-233209' '(at2g45730 : 518.0) eukaryotic initiation factor 3 gamma subunit family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, regulation of translational initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic initiation factor 3, gamma subunit (InterPro:IPR007316), tRNA (adenine-N(1)-)-methyltransferase, non-catalytic TRM6 subunit (InterPro:IPR017423); Has 402 Blast hits to 378 proteins in 203 species: Archae - 0; Bacteria - 4; Metazoa - 118; Fungi - 152; Plants - 45; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (gnl|cdd|36630 : 380.0) no description available & (gnl|cdd|67789 : 257.0) no description available & (reliability: 1036.0) & (original description: Putative BnaA04g26370D, Description = BnaA04g26370D protein, PFAM = PF04189)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf05584_353977-357926' '(gnl|cdd|38613 : 204.0) no description available & (at5g35680 : 193.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation initiation factor 1A (eIF-1A), conserved site (InterPro:IPR018104), S1, IF1 type (InterPro:IPR006196), Translation initiation factor 1A (eIF-1A) (InterPro:IPR001253); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G04520.1). & (p47815|if1a_wheat : 179.0) Eukaryotic translation initiation factor 1A (EIF-1A) (EIF-4C) - Triticum aestivum (Wheat) & (gnl|cdd|47929 : 103.0) no description available & (reliability: 386.0) & (original description: Putative if1a, Description = Eukaryotic translation initiation factor 1A, PFAM = PF01176)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf05676_632800-638086' '(gnl|cdd|35687 : 692.0) no description available & (at1g04170 : 593.0) protein synthesis initiation factor eIF2 gamma; eukaryotic translation initiation factor 2 gamma subunit (EIF2 GAMMA); CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Initiation factor eIF2 gamma, C-terminal (InterPro:IPR015256), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT4G18330.2); Has 29259 Blast hits to 29225 proteins in 6532 species: Archae - 651; Bacteria - 17093; Metazoa - 4832; Fungi - 574; Plants - 965; Viruses - 0; Other Eukaryotes - 5144 (source: NCBI BLink). & (gnl|cdd|34854 : 529.0) no description available & (reliability: 1186.0) & (original description: Putative EIF2S3, Description = Eukaryotic translation initiation factor 2 subunit 3, PFAM = PF00009;PF09173;PF03144)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf05678_223900-230649' '(at5g38640 : 704.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT1G48970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36680 : 583.0) no description available & (gnl|cdd|85181 : 255.0) no description available & (reliability: 1408.0) & (original description: Putative eif2B, Description = Eukaryotic translation initiation factor 2B delta, PFAM = PF01008)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf05827_306956-315246' '(at5g38640 : 611.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT1G48970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36680 : 553.0) no description available & (gnl|cdd|85181 : 254.0) no description available & (reliability: 1222.0) & (original description: Putative EIF2B4, Description = Translation initiation factor eIF-2B subunit delta, PFAM = PF01008)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf05928_304596-308635' '(p69040|if5a1_tobac : 308.0) Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) (eIF-4D) - Nicotiana tabacum (Common tobacco) & (at1g13950 : 267.0) Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines, xylem formation is reduced.; eukaryotic elongation factor 5A-1 (ELF5A-1); FUNCTIONS IN: ribosome binding, RNA binding, translation elongation factor activity, translation initiation factor activity; INVOLVED IN: translational initiation, xylem development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation elongation factor, IF5A, hypusine site (InterPro:IPR019769), Translation protein SH3-like, subgroup (InterPro:IPR014722), Translation elongation factor, IF5A (InterPro:IPR001884), Translation elongation factor, IF5A C-terminal (InterPro:IPR020189), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-3 (TAIR:AT1G69410.1); Has 1356 Blast hits to 1355 proteins in 415 species: Archae - 264; Bacteria - 0; Metazoa - 366; Fungi - 246; Plants - 261; Viruses - 0; Other Eukaryotes - 219 (source: NCBI BLink). & (gnl|cdd|38481 : 229.0) no description available & (gnl|cdd|85363 : 86.5) no description available & (reliability: 534.0) & (original description: Putative eIF5A, Description = Eukaryotic translation initiation factor 5A, PFAM = PF01287)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf06101_270275-275955' '(at1g04170 : 842.0) protein synthesis initiation factor eIF2 gamma; eukaryotic translation initiation factor 2 gamma subunit (EIF2 GAMMA); CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Initiation factor eIF2 gamma, C-terminal (InterPro:IPR015256), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT4G18330.2); Has 29259 Blast hits to 29225 proteins in 6532 species: Archae - 651; Bacteria - 17093; Metazoa - 4832; Fungi - 574; Plants - 965; Viruses - 0; Other Eukaryotes - 5144 (source: NCBI BLink). & (gnl|cdd|35687 : 828.0) no description available & (gnl|cdd|34854 : 571.0) no description available & (q9tjq8|eftu_prowi : 90.1) Elongation factor Tu (EF-Tu) - Prototheca wickerhamii & (reliability: 1684.0) & (original description: Putative EIF2S3, Description = Eukaryotic translation initiation factor 2 subunit 3, PFAM = PF03144;PF09173;PF00009)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf06222_65836-78693' '(at1g66070 : 147.0) Translation initiation factor eIF3 subunit; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor eIF3 subunit (InterPro:IPR013906); BEST Arabidopsis thaliana protein match is: Translation initiation factor eIF3 subunit (TAIR:AT5G37475.1). & (gnl|cdd|72022 : 115.0) no description available & (gnl|cdd|40010 : 94.4) no description available & (reliability: 294.0) & (original description: Putative At5g37475, Description = Eukaryotic translation initiation factor 3 subunit J, PFAM = PF08597)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf06902_250615-262439' '(at3g60240 : 750.0) protein synthesis initiation factor 4G (EIF4G). A mutation in this gene (cum2-1) results in decreased accumulation of CMV coat protein in upper, uninoculated leaves. Likely affects cell-to-cell movement of the virus, also affects TCV multiplication.; eukaryotic translation initiation factor 4G (EIF4G); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: response to virus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT5G57870.1); Has 9538 Blast hits to 7052 proteins in 555 species: Archae - 16; Bacteria - 1070; Metazoa - 4140; Fungi - 1856; Plants - 683; Viruses - 80; Other Eukaryotes - 1693 (source: NCBI BLink). & (gnl|cdd|35622 : 305.0) no description available & (q03387|if41_wheat : 179.0) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) - Triticum aestivum (Wheat) & (gnl|cdd|86149 : 179.0) no description available & (reliability: 1500.0) & (original description: Putative eIF4G, Description = Eukaryotic translation initiation factor 4 gamma 1, PFAM = PF02854;PF02847)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf07027_452631-458813' '(at3g55620 : 451.0) embryo defective 1624 (emb1624); FUNCTIONS IN: ribosome binding, translation initiation factor activity; INVOLVED IN: translational initiation, embryo development ending in seed dormancy; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF6 (InterPro:IPR002769); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF6 (TAIR:AT2G39820.1); Has 941 Blast hits to 941 proteins in 349 species: Archae - 255; Bacteria - 0; Metazoa - 235; Fungi - 146; Plants - 134; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|38395 : 430.0) no description available & (o81920|if6_betvu : 336.0) Eukaryotic translation initiation factor 6 (eIF-6) (Fragment) - Beta vulgaris (Sugar beet) & (gnl|cdd|29623 : 327.0) no description available & (reliability: 902.0) & (original description: Putative eIF6, Description = Eukaryotic translation initiation factor 6, PFAM = PF01912)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf07069_226552-232621' '(at1g66070 : 152.0) Translation initiation factor eIF3 subunit; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor eIF3 subunit (InterPro:IPR013906); BEST Arabidopsis thaliana protein match is: Translation initiation factor eIF3 subunit (TAIR:AT5G37475.1). & (gnl|cdd|72022 : 114.0) no description available & (gnl|cdd|40010 : 99.4) no description available & (reliability: 304.0) & (original description: Putative At1g66070, Description = Eukaryotic translation initiation factor 3 subunit J, PFAM = PF08597)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf07070_49563-52030' '(gnl|cdd|79229 : 131.0) no description available & (q332u2|if1c_lacsa : 129.0) Translation initiation factor IF-1, chloroplast - Lactuca sativa (Garden lettuce) & (at4g11175 : 103.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), S1, IF1 type (InterPro:IPR006196), Translation initiation factor IF-1 (InterPro:IPR004368); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative infA, Description = Translation initiation factor IF-1, chloroplastic, PFAM = PF01176)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf07091_104405-113482' '(at2g27880 : 1085.0) ARGONAUTE 5 (AGO5); FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Argonaute/Dicer protein, PAZ (InterPro:IPR003100); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT1G48410.1); Has 2539 Blast hits to 2399 proteins in 280 species: Archae - 0; Bacteria - 80; Metazoa - 1295; Fungi - 341; Plants - 581; Viruses - 6; Other Eukaryotes - 236 (source: NCBI BLink). & (gnl|cdd|36259 : 786.0) no description available & (gnl|cdd|72942 : 541.0) no description available & (reliability: 1972.0) & (original description: Putative MEL1, Description = Protein argonaute MEL1, PFAM = PF08699;PF16486;PF02170;PF16488;PF02171)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf07252_6477-12204' '(at3g57290 : 768.0) Encodes a protein that is found in not only the eif3 complex but also in association with subunits of the COP9 signalosome. eIF3e appears to be subjected to proteasome-dependent degradation that requires the PCI domain of eIF3e. The level of eIF3e present in cells appears to affect the rate of translation.; eukaryotic translation initiation factor 3E (EIF3E); FUNCTIONS IN: protein binding, translation initiation factor activity; INVOLVED IN: flower development, response to salt stress, translation, photomorphogenesis, transcription initiation; LOCATED IN: signalosome, eukaryotic translation initiation factor 3 complex, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor 3, subunit 6, eukaryotic (InterPro:IPR016650), Proteasome component (PCI) domain (InterPro:IPR000717), Eukaryotic translation initiation factor 3 (eIF3), subunit 6, N-terminal (InterPro:IPR019010); Has 641 Blast hits to 638 proteins in 243 species: Archae - 0; Bacteria - 2; Metazoa - 287; Fungi - 119; Plants - 138; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|37969 : 611.0) no description available & (gnl|cdd|87985 : 187.0) no description available & (reliability: 1536.0) & (original description: Putative TIF3E1, Description = Eukaryotic translation initiation factor 3 subunit E, PFAM = PF09440;PF01399)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf07323_92228-101352' '(at1g10840 : 555.0) Encodes eukaryotic initiation factor 3H1 subunit (TIF3H1).; translation initiation factor 3 subunit H1 (TIF3H1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36773 : 279.0) no description available & (reliability: 1110.0) & (original description: Putative TIF3H1, Description = Eukaryotic translation initiation factor 3 subunit H, PFAM = PF01398)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf07531_83347-264906' '(at1g53900 : 149.0) Eukaryotic translation initiation factor 2B (eIF-2B) family protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649), Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Eukaryotic translation initiation factor 2B (eIF-2B) family protein (TAIR:AT1G53880.1); Has 4724 Blast hits to 4722 proteins in 1045 species: Archae - 373; Bacteria - 1754; Metazoa - 521; Fungi - 487; Plants - 467; Viruses - 0; Other Eukaryotes - 1122 (source: NCBI BLink). & (gnl|cdd|86676 : 135.0) no description available & (reliability: 298.0) & (original description: Putative At1g53870, Description = Protein LURP-one-related 2, PFAM = PF04525)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf07531_182599-185481' '(at1g53900 : 161.0) Eukaryotic translation initiation factor 2B (eIF-2B) family protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649), Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Eukaryotic translation initiation factor 2B (eIF-2B) family protein (TAIR:AT1G53880.1); Has 4724 Blast hits to 4722 proteins in 1045 species: Archae - 373; Bacteria - 1754; Metazoa - 521; Fungi - 487; Plants - 467; Viruses - 0; Other Eukaryotes - 1122 (source: NCBI BLink). & (gnl|cdd|86676 : 148.0) no description available & (reliability: 322.0) & (original description: Putative At3g14260, Description = Protein LURP-one-related 11, PFAM = PF04525)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf07629_54829-98940' '(at2g13540 : 1099.0) Encodes a nuclear cap-binding protein that forms a heterodimeric complex with CBP20 and is involved in ABA signaling and flowering. Mutants are early flowering and exhibit hypersensitive response to ABA in germination inhibition.Loss of ABH1 function results in abnormal processing of mRNAs for several important floral regulators (FLC, CO, FLM). Analysis of loss of function mutations suggests a role in pri-miRNA processing and mRNA splicing. Note that two different mutant alleles were given the same name abh1-7 (Kuhn et al 2007; Kim et al 2008). To avoid confusion, abh1-7 described in Kim et al (2008) has been renamed abh1-107 (other names: ensalada-1, ens-1).; ABA HYPERSENSITIVE 1 (ABH1); CONTAINS InterPro DOMAIN/s: MIF4G-like, type 2 (InterPro:IPR015174), MIF4G-like, type 1 (InterPro:IPR015172), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); Has 514 Blast hits to 510 proteins in 229 species: Archae - 0; Bacteria - 96; Metazoa - 188; Fungi - 131; Plants - 55; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|36320 : 644.0) no description available & (gnl|cdd|87792 : 158.0) no description available & (reliability: 2198.0) & (original description: Putative ABH1, Description = Nuclear cap-binding protein subunit 1, PFAM = PF09090;PF09088;PF02854)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf08128_50744-57064' '(p56821|if39_tobac : 1138.0) Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p110) (eIF3b) - Nicotiana tabacum (Common tobacco) & (at5g27640 : 971.0) encodes a member of eukaryotic translation initiation factor 3B family.; translation initiation factor 3B1 (TIF3B1); FUNCTIONS IN: nucleic acid binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytosol, eukaryotic translation initiation factor 3 complex, nucleus; EXPRESSED IN: guard cell, cultured cell, seed; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 2A, central region (InterPro:IPR013979), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Translation initiation factor eIF-3b (InterPro:IPR011400); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3B-2 (TAIR:AT5G25780.1); Has 966 Blast hits to 959 proteins in 251 species: Archae - 0; Bacteria - 19; Metazoa - 298; Fungi - 315; Plants - 111; Viruses - 6; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|37525 : 586.0) no description available & (gnl|cdd|34929 : 267.0) no description available & (reliability: 1942.0) & (original description: Putative IF3B, Description = Eukaryotic translation initiation factor 3B, PFAM = PF00076;PF08662)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf08128_53852-57046' '(p56821|if39_tobac : 206.0) Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p110) (eIF3b) - Nicotiana tabacum (Common tobacco) & (at5g27640 : 162.0) encodes a member of eukaryotic translation initiation factor 3B family.; translation initiation factor 3B1 (TIF3B1); FUNCTIONS IN: nucleic acid binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytosol, eukaryotic translation initiation factor 3 complex, nucleus; EXPRESSED IN: guard cell, cultured cell, seed; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 2A, central region (InterPro:IPR013979), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Translation initiation factor eIF-3b (InterPro:IPR011400); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3B-2 (TAIR:AT5G25780.1); Has 966 Blast hits to 959 proteins in 251 species: Archae - 0; Bacteria - 19; Metazoa - 298; Fungi - 315; Plants - 111; Viruses - 6; Other Eukaryotes - 217 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative PRT, Description = Eukaryotic translation initiation factor 3 subunit, PFAM = )' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf08259_254668-261804' '(at2g45730 : 513.0) eukaryotic initiation factor 3 gamma subunit family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, regulation of translational initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic initiation factor 3, gamma subunit (InterPro:IPR007316), tRNA (adenine-N(1)-)-methyltransferase, non-catalytic TRM6 subunit (InterPro:IPR017423); Has 402 Blast hits to 378 proteins in 203 species: Archae - 0; Bacteria - 4; Metazoa - 118; Fungi - 152; Plants - 45; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (gnl|cdd|36630 : 374.0) no description available & (gnl|cdd|67789 : 255.0) no description available & (reliability: 1026.0) & (original description: Putative At2g45730, Description = Eukaryotic initiation factor 3 gamma subunit family protein, PFAM = PF04189)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf08573_150363-161592' '(at5g36230 : 641.0) ARM repeat superfamily protein; FUNCTIONS IN: binding, translation initiation factor activity; INVOLVED IN: regulation of translational initiation; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G65220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37508 : 547.0) no description available & (gnl|cdd|47818 : 88.0) no description available & (reliability: 1282.0) & (original description: Putative gpm710, Description = Eukaryotic initiation factor 5C CG2922-PF, isoform F, PFAM = PF02020)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf08588_132298-136129' '(p24922|if5a2_nicpl : 301.0) Eukaryotic translation initiation factor 5A-2 (eIF-5A-2) (eIF-4D) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g69410 : 273.0) Encodes eIF5A-2, a putative eukaryotic translation initiation factor. There are three eIF5A coding genes in Arabidopsis: eIF5A-1/At1g13950, eIF5A-2/At1g26630 and eIF5A-3/At1g69410.; eukaryotic elongation factor 5A-3 (ELF5A-3); FUNCTIONS IN: ribosome binding, RNA binding, translation elongation factor activity, translation initiation factor activity; INVOLVED IN: translational initiation, translational frameshifting, positive regulation of translational termination, peptidyl-lysine modification to hypusine, positive regulation of translational elongation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation elongation factor, IF5A, hypusine site (InterPro:IPR019769), Translation protein SH3-like, subgroup (InterPro:IPR014722), Translation elongation factor, IF5A (InterPro:IPR001884), Translation elongation factor, IF5A C-terminal (InterPro:IPR020189), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-1 (TAIR:AT1G13950.1); Has 1331 Blast hits to 1330 proteins in 408 species: Archae - 255; Bacteria - 0; Metazoa - 363; Fungi - 252; Plants - 260; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (gnl|cdd|38481 : 230.0) no description available & (gnl|cdd|30580 : 90.2) no description available & (reliability: 546.0) & (original description: Putative TIF5A, Description = Eukaryotic translation initiation factor 5A, PFAM = PF01287)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf08665_125125-140517' '(o24473|if2b_wheat : 370.0) Eukaryotic translation initiation factor 2 subunit beta (eIF-2-beta) (P38) - Triticum aestivum (Wheat) & (at5g20920 : 343.0) protein synthesis initiation factor eIF2 beta; eukaryotic translation initiation factor 2 beta subunit (EIF2 BETA); FUNCTIONS IN: protein binding, translation initiation factor activity; INVOLVED IN: translational initiation, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF2/IF5, N-terminal (InterPro:IPR016189), Translation initiation factor IF2/IF5, zinc-binding (InterPro:IPR016190), Translation initiation factor IF2/IF5 (InterPro:IPR002735); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF2/IF5 (TAIR:AT3G07920.1); Has 1323 Blast hits to 1320 proteins in 358 species: Archae - 271; Bacteria - 0; Metazoa - 350; Fungi - 277; Plants - 186; Viruses - 4; Other Eukaryotes - 235 (source: NCBI BLink). & (gnl|cdd|37979 : 273.0) no description available & (gnl|cdd|85734 : 177.0) no description available & (reliability: 686.0) & (original description: Putative eIF2A, Description = Eukaryotic translation initiation factor 2 subunit 2, PFAM = PF01873)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf08785_266914-273959' '(o81481|if4e1_maize : 303.0) Eukaryotic translation initiation factor 4E-1 (eIF4E-1) (eIF-4E-1) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (eIF-4F p26 subunit) - Zea mays (Maize) & (at4g18040 : 287.0) eIF4E protein. The cum1 mutation affects the local spreading of CMV within the inoculated leaf, delaying accumulation of cucumber mosaic virus coat protein.; eukaryotic translation initiation factor 4E (EIF4E); CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 4E (eIF-4E) (InterPro:IPR001040), Eukaryotic translation initiation factor 4E (eIF-4E), conserved site (InterPro:IPR019770); BEST Arabidopsis thaliana protein match is: Eukaryotic initiation factor 4E protein (TAIR:AT1G29550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85593 : 255.0) no description available & (gnl|cdd|36883 : 224.0) no description available & (reliability: 574.0) & (original description: Putative eIF4E, Description = Eukaryotic translation initiation factor 4E, PFAM = PF01652)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf09954_129868-132956' '(p56821|if39_tobac : 318.0) Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p110) (eIF3b) - Nicotiana tabacum (Common tobacco) & (at5g27640 : 256.0) encodes a member of eukaryotic translation initiation factor 3B family.; translation initiation factor 3B1 (TIF3B1); FUNCTIONS IN: nucleic acid binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytosol, eukaryotic translation initiation factor 3 complex, nucleus; EXPRESSED IN: guard cell, cultured cell, seed; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 2A, central region (InterPro:IPR013979), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Translation initiation factor eIF-3b (InterPro:IPR011400); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3B-2 (TAIR:AT5G25780.1); Has 966 Blast hits to 959 proteins in 251 species: Archae - 0; Bacteria - 19; Metazoa - 298; Fungi - 315; Plants - 111; Viruses - 6; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|37525 : 133.0) no description available & (reliability: 512.0) & (original description: Putative eIF5, Description = eIF-3-eta, PFAM = PF00076)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf10324_208371-216120' '(o81482|if4e2_maize : 271.0) Eukaryotic translation initiation factor 4E-2 (eIF4E-2) (eIF-4E-2) (mRNA cap-binding protein) (eIF-(iso)4F 25 kDa subunit) (eIF-(iso)4F p28 subunit) - Zea mays (Maize) & (gnl|cdd|85593 : 237.0) no description available & (at5g35620 : 235.0) Cap-binding protein, binds to the 5' cap structure of nuclear-encoded mRNAs. Mutant is resistant to potyvirus infection.; LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1 (LSP1); FUNCTIONS IN: RNA binding, RNA 7-methylguanosine cap binding, translation initiation factor activity; INVOLVED IN: translational initiation, response to virus; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 4E (eIF-4E) (InterPro:IPR001040), Eukaryotic translation initiation factor 4E (eIF-4E), conserved site (InterPro:IPR019770); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4E (TAIR:AT4G18040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36883 : 209.0) no description available & (reliability: 470.0) & (original description: Putative eIF4E, Description = Eukaryotic translation initiation factor 4E, PFAM = PF01652)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf10749_321513-323848' '(at5g54940 : 176.0) Translation initiation factor SUI1 family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, translation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor SUI1 (InterPro:IPR001950), Eukaryotic translation initiation factor SUI1 (InterPro:IPR005874); BEST Arabidopsis thaliana protein match is: Translation initiation factor SUI1 family protein (TAIR:AT4G27130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p56330|sui1_maize : 170.0) Protein translation factor SUI1 homolog (Protein GOS2) - Zea mays (Maize) & (gnl|cdd|36981 : 141.0) no description available & (reliability: 352.0) & (original description: Putative eIF1, Description = Eukaryotic translation initiation factor 1, PFAM = PF01253)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf11262_137875-145880' '(at5g43810 : 1602.0) Encodes a member of the EIF2C (elongation initiation factor 2c)/ Argonaute class of proteins. Required to establish the central-peripheral organization of the embryo apex. Along with WUS and CLV genes, controls the relative organization of central zone and peripheral zone cells in meristems. Acts in embryonic provascular tissue potentiating WUSCHEL function during meristem development in the embryo.; ZWILLE (ZLL); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT1G48410.1). & (gnl|cdd|36259 : 849.0) no description available & (gnl|cdd|72942 : 563.0) no description available & (reliability: 3204.0) & (original description: Putative AGO10, Description = Protein argonaute 10, PFAM = PF16488;PF08699;PF16487;PF16486;PF02170;PF02171)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf11490_16621-19787' '(p33278|sui1_orysa : 202.0) Protein translation factor SUI1 homolog (Protein GOS2) (Translational initiation factor 1) (Protein eIF1) - Oryza sativa (Rice) & (at4g27130 : 192.0) Translation initiation factor SUI1 family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, translation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor SUI1 (InterPro:IPR001950), Eukaryotic translation initiation factor SUI1 (InterPro:IPR005874); BEST Arabidopsis thaliana protein match is: Translation initiation factor SUI1 family protein (TAIR:AT5G54760.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36981 : 153.0) no description available & (gnl|cdd|29592 : 88.7) no description available & (reliability: 384.0) & (original description: Putative GOS2, Description = Protein translation factor SUI1 homolog, PFAM = PF01253)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf12339_61594-82616' '(at1g53900 : 516.0) Eukaryotic translation initiation factor 2B (eIF-2B) family protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649), Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Eukaryotic translation initiation factor 2B (eIF-2B) family protein (TAIR:AT1G53880.1); Has 4724 Blast hits to 4722 proteins in 1045 species: Archae - 373; Bacteria - 1754; Metazoa - 521; Fungi - 487; Plants - 467; Viruses - 0; Other Eukaryotes - 1122 (source: NCBI BLink). & (gnl|cdd|36679 : 415.0) no description available & (gnl|cdd|85181 : 207.0) no description available & (reliability: 1032.0) & (original description: Putative eif2b1, Description = Translation initiation factor eIF-2B subunit alpha, PFAM = PF01008)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf12404_34613-41834' '(at3g07300 : 506.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT2G44070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36678 : 367.0) no description available & (gnl|cdd|85181 : 181.0) no description available & (reliability: 1012.0) & (original description: Putative eif2b2, Description = Translation initiation factor eIF-2B subunit beta, PFAM = PF01008)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf14566_117631-123875' '(at4g30690 : 230.0) Translation initiation factor 3 protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor 3, N-terminal (InterPro:IPR019814), Translation initiation factor 3, C-terminal (InterPro:IPR019815), Translation initiation factor 3 (InterPro:IPR001288); BEST Arabidopsis thaliana protein match is: Translation initiation factor 3 protein (TAIR:AT2G24060.1). & (gnl|cdd|80458 : 173.0) no description available & (reliability: 460.0) & (original description: Putative infC, Description = Translation initiation factor IF-3, PFAM = PF05198;PF00707)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf16416_337942-346326' '(q9xhm1|if38_medtr : 1033.0) Eukaryotic translation initiation factor 3 subunit 8 (eIF3 p110) (eIF3c) - Medicago truncatula (Barrel medic) & (at3g56150 : 1011.0) member of eIF3c - eukaryotic initiation factor 3c; eukaryotic translation initiation factor 3C (EIF3C); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Proteasome component (PCI) domain (InterPro:IPR000717), Eukaryotic translation initiation factor 3 subunit 8, N-terminal (InterPro:IPR008905); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3 subunit C2 (TAIR:AT3G22860.1). & (gnl|cdd|36292 : 965.0) no description available & (gnl|cdd|69019 : 776.0) no description available & (reliability: 2022.0) & (original description: Putative TIF3C1, Description = Eukaryotic translation initiation factor 3 subunit C, PFAM = PF01399;PF05470)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf17111_52291-63978' '(at4g23330 : 150.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2365 (InterPro:IPR019314). & (reliability: 300.0) & (original description: Putative BnaC01g14900D, Description = BnaC01g14900D protein, PFAM = PF10157)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf17671_47979-57424' '(at5g57870 : 809.0) Encodes a putative eukaryotic translation initiation factor.; eukaryotic translation Initiation Factor isoform 4G1 (eIFiso4G1); FUNCTIONS IN: RNA binding, binding, translation initiation factor activity; INVOLVED IN: translational initiation, translation, RNA metabolic process; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT2G24050.1); Has 2168 Blast hits to 1785 proteins in 242 species: Archae - 0; Bacteria - 22; Metazoa - 1155; Fungi - 192; Plants - 508; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (q03387|if41_wheat : 774.0) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) - Triticum aestivum (Wheat) & (gnl|cdd|35622 : 442.0) no description available & (gnl|cdd|86149 : 170.0) no description available & (reliability: 1618.0) & (original description: Putative eIF4, Description = Eukaryotic translation initiation factor isoform 4G-1, PFAM = PF02854;PF02847)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf18156_1-7646' '(at1g71350 : 793.0) eukaryotic translation initiation factor SUI1 family protein; FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translational initiation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Translation initiation factor SUI1 (InterPro:IPR001950), SWIB/MDM2 domain (InterPro:IPR003121), Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478), Uncharacterised domain 2 (InterPro:IPR004521); BEST Arabidopsis thaliana protein match is: pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein (TAIR:AT1G09150.1); Has 1013 Blast hits to 993 proteins in 255 species: Archae - 62; Bacteria - 0; Metazoa - 354; Fungi - 333; Plants - 100; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (gnl|cdd|37733 : 527.0) no description available & (gnl|cdd|32199 : 85.3) no description available & (reliability: 1586.0) & (original description: Putative EIF2D, Description = Translation initiation factor 2D, PFAM = PF01253)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf18308_189044-193953' '(p56333|if5a1_soltu : 300.0) Eukaryotic translation initiation factor 5A-1/2 (eIF-5A-1/2) (eIF-4D) - Solanum tuberosum (Potato) & (at1g13950 : 270.0) Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines, xylem formation is reduced.; eukaryotic elongation factor 5A-1 (ELF5A-1); FUNCTIONS IN: ribosome binding, RNA binding, translation elongation factor activity, translation initiation factor activity; INVOLVED IN: translational initiation, xylem development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation elongation factor, IF5A, hypusine site (InterPro:IPR019769), Translation protein SH3-like, subgroup (InterPro:IPR014722), Translation elongation factor, IF5A (InterPro:IPR001884), Translation elongation factor, IF5A C-terminal (InterPro:IPR020189), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-3 (TAIR:AT1G69410.1); Has 1356 Blast hits to 1355 proteins in 415 species: Archae - 264; Bacteria - 0; Metazoa - 366; Fungi - 246; Plants - 261; Viruses - 0; Other Eukaryotes - 219 (source: NCBI BLink). & (gnl|cdd|38481 : 228.0) no description available & (gnl|cdd|30580 : 85.2) no description available & (reliability: 540.0) & (original description: Putative EIF5A1, Description = Eukaryotic translation initiation factor 5A-1/2, PFAM = PF01287)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf23814_149340-169300' '(gnl|cdd|69019 : 180.0) no description available & (gnl|cdd|36292 : 160.0) no description available & (at3g56150 : 136.0) member of eIF3c - eukaryotic initiation factor 3c; eukaryotic translation initiation factor 3C (EIF3C); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Proteasome component (PCI) domain (InterPro:IPR000717), Eukaryotic translation initiation factor 3 subunit 8, N-terminal (InterPro:IPR008905); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3 subunit C2 (TAIR:AT3G22860.1). & (q9xhm1|if38_medtr : 136.0) Eukaryotic translation initiation factor 3 subunit 8 (eIF3 p110) (eIF3c) - Medicago truncatula (Barrel medic) & (reliability: 272.0) & (original description: Putative nip1, Description = Eukaryotic translation initiation factor 3 subunit C, PFAM = PF05470)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf26781_7688-9990' '(q40471|if4a9_tobac : 429.0) Eukaryotic initiation factor 4A-9 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-9) (eIF-4A-9) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 414.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (gnl|cdd|35549 : 333.0) no description available & (gnl|cdd|30859 : 206.0) no description available & (reliability: 828.0) & (original description: Putative fal1, Description = ATP-dependent RNA helicase eIF4A, PFAM = PF00271)' T '29.2.3' 'protein.synthesis.initiation' 'niben101scf27030_72229-82138' '(at5g11900 : 255.0) Translation initiation factor SUI1 family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor SUI1 (InterPro:IPR001950), Density-regulated protein DRP1 (InterPro:IPR005873); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38449 : 175.0) no description available & (reliability: 510.0) & (original description: Putative SUI1B, Description = Translation initiation factor SUI1 family protein, PFAM = PF01253)' T '29.2.3.1' 'protein.synthesis.initiation.deoxyhypusine synthase' 'niben101scf05438_583554-591126' '(q9sc80|dhys_tobac : 767.0) Deoxyhypusine synthase (EC 2.5.1.46) - Nicotiana tabacum (Common tobacco) & (at5g05920 : 613.0) Encodes a deoxyhypusine synthase.; deoxyhypusine synthase (DHS); INVOLVED IN: embryo sac development, peptidyl-lysine modification to hypusine; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Deoxyhypusine synthase (InterPro:IPR002773); Has 2057 Blast hits to 2052 proteins in 494 species: Archae - 295; Bacteria - 232; Metazoa - 167; Fungi - 158; Plants - 157; Viruses - 0; Other Eukaryotes - 1048 (source: NCBI BLink). & (gnl|cdd|38135 : 581.0) no description available & (gnl|cdd|85765 : 425.0) no description available & (reliability: 1226.0) & (original description: Putative DHS1, Description = Deoxyhypusine synthase, PFAM = PF01916)' T '29.2.4' 'protein.synthesis.elongation' 'nbv0.3scaffold1222_80163-85295' '(gnl|cdd|37450 : 189.0) no description available & (at3g12390 : 155.0) Nascent polypeptide-associated complex (NAC), alpha subunit family protein; INVOLVED IN: response to salt stress; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: nascent polypeptide-associated complex subunit alpha-like protein 3 (TAIR:AT5G13850.1); Has 5275 Blast hits to 2514 proteins in 367 species: Archae - 69; Bacteria - 684; Metazoa - 1880; Fungi - 785; Plants - 552; Viruses - 60; Other Eukaryotes - 1245 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative aic, Description = Nascent polypeptide-associated complex subunit alpha, PFAM = PF01849)' T '29.2.4' 'protein.synthesis.elongation' 'nbv0.3scaffold9284_2721-10615' '(at4g29060 : 896.0) embryo defective 2726 (emb2726); FUNCTIONS IN: RNA binding, translation elongation factor activity; INVOLVED IN: translational elongation, response to cadmium ion, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Translation elongation factor EFTs/EF1B (InterPro:IPR001816), Translation elongation factor EFTs/EF1B, dimerisation (InterPro:IPR014039), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation elongation factor Ts, conserved site (InterPro:IPR018101), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: translation elongation factor Ts (EF-Ts), putative (TAIR:AT4G11120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84085 : 291.0) no description available & (gnl|cdd|36289 : 236.0) no description available & (reliability: 1792.0) & (original description: Putative etsf, Description = EF-Ts, PFAM = PF00575;PF00575;PF00889;PF00889)' T '29.2.4' 'protein.synthesis.elongation' 'nbv0.3scaffold22672_3370-6875' '(at1g30230 : 270.0) Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: plasma membrane, eukaryotic translation elongation factor 1 complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange (InterPro:IPR014038), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Translation elongation factor EF1B, beta/delta chains, conserved site (InterPro:IPR001326); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1B/ribosomal protein S6 family protein (TAIR:AT2G18110.1); Has 1008 Blast hits to 1006 proteins in 266 species: Archae - 0; Bacteria - 0; Metazoa - 526; Fungi - 158; Plants - 163; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (o81918|ef1d_betvu : 232.0) Elongation factor 1-delta (EF-1-delta) (Elongation factor 1B-beta) (eEF-1B beta) - Beta vulgaris (Sugar beet) & (gnl|cdd|36881 : 232.0) no description available & (gnl|cdd|84994 : 106.0) no description available & (reliability: 540.0) & (original description: Putative eef1b, Description = Elongation factor 1-beta, PFAM = PF00736)' T '29.2.4' 'protein.synthesis.elongation' 'nbv0.3scaffold27414_2482-11209' '(at5g10630 : 728.0) Translation elongation factor EF1A/initiation factor IF2gamma family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Zinc finger, RanBP2-type (InterPro:IPR001876), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT1G18070.2). & (gnl|cdd|35679 : 501.0) no description available & (gnl|cdd|34853 : 408.0) no description available & (p29521|ef1a1_dauca : 273.0) Elongation factor 1-alpha (EF-1-alpha) - Daucus carota (Carrot) & (reliability: 1456.0) & (original description: Putative efg4, Description = HBS1-like protein, PFAM = PF03143;PF00009)' T '29.2.4' 'protein.synthesis.elongation' 'nbv0.3scaffold28728_555-2510' '(at5g60390 : 267.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o24534|ef1a_vicfa : 267.0) Elongation factor 1-alpha (EF-1-alpha) - Vicia faba (Broad bean) & (gnl|cdd|57966 : 233.0) no description available & (gnl|cdd|35275 : 214.0) no description available & (reliability: 534.0) & (original description: Putative ef1a, Description = Elongation factor 1-alpha, PFAM = PF00009)' T '29.2.4' 'protein.synthesis.elongation' 'nbv0.3scaffold32299_13054-22821' '(at4g11120 : 446.0) translation elongation factor Ts (EF-Ts), putative; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor Ts, conserved site (InterPro:IPR018101), Translation elongation factor EFTs/EF1B (InterPro:IPR001816), UBA-like (InterPro:IPR009060), Translation elongation factor EFTs/EF1B, dimerisation (InterPro:IPR014039); BEST Arabidopsis thaliana protein match is: elongation factor Ts family protein (TAIR:AT4G29060.1); Has 9471 Blast hits to 8571 proteins in 2664 species: Archae - 0; Bacteria - 5908; Metazoa - 120; Fungi - 25; Plants - 215; Viruses - 0; Other Eukaryotes - 3203 (source: NCBI BLink). & (gnl|cdd|82964 : 244.0) no description available & (gnl|cdd|36289 : 208.0) no description available & (reliability: 892.0) & (original description: Putative EFTS, Description = Elongation factor Ts, mitochondrial, PFAM = PF00889)' T '29.2.4' 'protein.synthesis.elongation' 'nbv0.3scaffold39848_2321-9890' '(at5g10630 : 673.0) Translation elongation factor EF1A/initiation factor IF2gamma family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Zinc finger, RanBP2-type (InterPro:IPR001876), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT1G18070.2). & (gnl|cdd|35679 : 528.0) no description available & (gnl|cdd|34853 : 426.0) no description available & (p25698|ef1a_soybn : 279.0) Elongation factor 1-alpha (EF-1-alpha) - Glycine max (Soybean) & (reliability: 1346.0) & (original description: Putative efg4, Description = Elongation factor-like protein, PFAM = PF03143;PF00009)' T '29.2.4' 'protein.synthesis.elongation' 'nbv0.3scaffold43312_2298-5470' '(gnl|cdd|37450 : 191.0) no description available & (at3g49470 : 171.0) nascent polypeptide-associated complex subunit alpha-like protein 2 (NACA2); CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: Nascent polypeptide-associated complex (NAC), alpha subunit family protein (TAIR:AT4G10480.1); Has 1390 Blast hits to 1373 proteins in 295 species: Archae - 27; Bacteria - 8; Metazoa - 613; Fungi - 295; Plants - 175; Viruses - 7; Other Eukaryotes - 265 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative aic, Description = Nascent polypeptide-associated complex subunit alpha, PFAM = PF01849)' T '29.2.4' 'protein.synthesis.elongation' 'nbv0.3scaffold43922_5997-17650' '(at2g31060 : 661.0) elongation factor family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein TypA (InterPro:IPR006298), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: elongation factor family protein (TAIR:AT5G13650.2). & (gnl|cdd|31410 : 494.0) no description available & (gnl|cdd|35683 : 335.0) no description available & (reliability: 1322.0) & (original description: Putative bipA, Description = GTP-binding protein TypA, PFAM = PF00679)' T '29.2.4' 'protein.synthesis.elongation' 'nbv0.3scaffold44308_8909-12342' '(p68158|eftu_tobac : 797.0) Elongation factor Tu, chloroplast precursor (EF-Tu) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79288 : 761.0) no description available & (at4g20360 : 687.0) RAB GTPase homolog E1B (RABE1b); FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: peptidyl-cysteine S-nitrosylation; LOCATED IN: in 9 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, bacterial/organelle (InterPro:IPR004541), Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT4G02930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35681 : 646.0) no description available & (reliability: 1374.0) & (original description: Putative TUFA, Description = Elongation factor TuA, chloroplastic, PFAM = PF00009;PF03144;PF03143)' T '29.2.4' 'protein.synthesis.elongation' 'nbv0.3scaffold50908_8375-13508' '(at2g31060 : 181.0) elongation factor family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein TypA (InterPro:IPR006298), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: elongation factor family protein (TAIR:AT5G13650.2). & (gnl|cdd|31410 : 130.0) no description available & (reliability: 362.0) & (original description: Putative typA, Description = GTP binding Elongation factor Tu family protein, PFAM = )' T '29.2.4' 'protein.synthesis.elongation' 'nbv0.5scaffold661_172019-186260' '(at4g26310 : 226.0) elongation factor P (EF-P) family protein; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation elongation factor P/YeiP, central (InterPro:IPR001059), Translation elongation factor, KOW-like (InterPro:IPR013185), Translation protein SH3-like, subgroup (InterPro:IPR014722); BEST Arabidopsis thaliana protein match is: elongation factor P (EF-P) family protein (TAIR:AT3G08740.1). & (gnl|cdd|80699 : 189.0) no description available & (reliability: 452.0) & (original description: Putative efp, Description = Elongation factor P, PFAM = PF09285;PF01132;PF08207)' T '29.2.4' 'protein.synthesis.elongation' 'nbv0.5scaffold884_22727-28879' '(p34811|efgc_soybn : 1233.0) Elongation factor G, chloroplast precursor (EF-G) - Glycine max (Soybean) & (at1g62750 : 1208.0) Nuclear encoded protein consists of the five domains conserved in EF-G proteins, with two GTP-binding sites in the first domain, and an additional transit peptide at the N-terminus. Localized in chloroplasts. Point mutation results in a delay in the onset of germination. At early developmental stage embryos still contain undifferentiated proplastids. The greening of cotyledons is severely impaired in light-grown mutant sco1 seedlings, whereas the following true leaves develop normally as in wild-type plants.; SNOWY COTYLEDON 1 (SCO1); FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation elongation factor activity, ATP binding; INVOLVED IN: post-embryonic development, chloroplast organization, seed germination; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFG/EF2 (InterPro:IPR004540), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EFG/EF2 protein (TAIR:AT2G45030.1); Has 79823 Blast hits to 67706 proteins in 7071 species: Archae - 929; Bacteria - 47320; Metazoa - 4453; Fungi - 5428; Plants - 1613; Viruses - 3; Other Eukaryotes - 20077 (source: NCBI BLink). & (gnl|cdd|80442 : 1143.0) no description available & (gnl|cdd|35686 : 919.0) no description available & (reliability: 2416.0) & (original description: Putative fusA1, Description = Elongation factor G-1, chloroplastic, PFAM = PF00679;PF14492;PF00009;PF03144;PF03764)' T '29.2.4' 'protein.synthesis.elongation' 'nbv0.5scaffold1864_208539-213604' '(at3g22980 : 1447.0) Ribosomal protein S5/Elongation factor G/III/V family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT1G56070.1); Has 75542 Blast hits to 60298 proteins in 6538 species: Archae - 1481; Bacteria - 47710; Metazoa - 4520; Fungi - 3401; Plants - 1472; Viruses - 1; Other Eukaryotes - 16957 (source: NCBI BLink). & (gnl|cdd|35688 : 975.0) no description available & (o23755|ef2_betvu : 437.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (gnl|cdd|57968 : 318.0) no description available & (reliability: 2894.0) & (original description: Putative At3g22980, Description = Ribosomal protein S5/Elongation factor G/III/V family protein, PFAM = PF14492;PF03144;PF00009;PF00679)' T '29.2.4' 'protein.synthesis.elongation' 'nbv0.5scaffold2542_33907-37345' '(o64937|ef1a_orysa : 295.0) Elongation factor 1-alpha (EF-1-alpha) - Oryza sativa (Rice) & (at5g60390 : 293.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|57966 : 272.0) no description available & (gnl|cdd|35275 : 234.0) no description available & (reliability: 586.0) & (original description: Putative tef1, Description = Tef1 protein, PFAM = PF00009)' T '29.2.4' 'protein.synthesis.elongation' 'nbv0.5scaffold3404_294276-311441' '(at2g45030 : 1100.0) Translation elongation factor EFG/EF2 protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2 (InterPro:IPR004540), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Elongation factor G/III/V (InterPro:IPR009022), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EFG/EF2 protein (TAIR:AT1G45332.1); Has 86156 Blast hits to 73724 proteins in 9924 species: Archae - 905; Bacteria - 48991; Metazoa - 8060; Fungi - 6843; Plants - 1619; Viruses - 3; Other Eukaryotes - 19735 (source: NCBI BLink). & (q9fe64|efgm_orysa : 1097.0) Elongation factor G, mitochondrial precursor (mEF-G) - Oryza sativa (Rice) & (gnl|cdd|35686 : 921.0) no description available & (gnl|cdd|84252 : 766.0) no description available & (reliability: 2200.0) & (original description: Putative MEFG1, Description = Elongation factor G-1, mitochondrial, PFAM = PF00009;PF14492;PF03764;PF00679;PF03144)' T '29.2.4' 'protein.synthesis.elongation' 'nbv0.5scaffold3984_95143-99449' '(at1g12420 : 551.0) ACT domain repeat 8 (ACR8); CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 7 (TAIR:AT4G22780.1); Has 2013 Blast hits to 1422 proteins in 371 species: Archae - 0; Bacteria - 1118; Metazoa - 0; Fungi - 0; Plants - 487; Viruses - 0; Other Eukaryotes - 408 (source: NCBI BLink). & (gnl|cdd|80396 : 126.0) no description available & (reliability: 1050.0) & (original description: Putative ACR8, Description = ACT domain-containing protein ACR8, PFAM = PF01842;PF01842)' T '29.2.4' 'protein.synthesis.elongation' 'nbv0.5scaffold3998_83039-85513' '(at5g60390 : 242.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o24534|ef1a_vicfa : 241.0) Elongation factor 1-alpha (EF-1-alpha) - Vicia faba (Broad bean) & (gnl|cdd|57966 : 219.0) no description available & (gnl|cdd|35275 : 196.0) no description available & (reliability: 484.0) & (original description: Putative ef1a, Description = Elongation factor 1-alpha, PFAM = PF00009)' T '29.2.4' 'protein.synthesis.elongation' 'nbv0.5scaffold4857_131911-160727' '(at2g31060 : 986.0) elongation factor family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein TypA (InterPro:IPR006298), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: elongation factor family protein (TAIR:AT5G13650.2). & (gnl|cdd|31410 : 741.0) no description available & (gnl|cdd|35683 : 580.0) no description available & (reliability: 1972.0) & (original description: Putative bipA, Description = GTP-binding protein, PFAM = PF00009;PF00679)' T '29.2.4' 'protein.synthesis.elongation' 'nbv0.5scaffold5235_92906-101633' '(at5g10630 : 594.0) Translation elongation factor EF1A/initiation factor IF2gamma family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Zinc finger, RanBP2-type (InterPro:IPR001876), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT1G18070.2). & (gnl|cdd|35679 : 442.0) no description available & (gnl|cdd|34853 : 356.0) no description available & (p25698|ef1a_soybn : 235.0) Elongation factor 1-alpha (EF-1-alpha) - Glycine max (Soybean) & (reliability: 1188.0) & (original description: Putative efg4, Description = Elongation factor-like protein, PFAM = PF03143;PF00009)' T '29.2.4' 'protein.synthesis.elongation' 'nbv0.5scaffold5249_138805-142397' '(at1g56070 : 1003.0) encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (LOS1); FUNCTIONS IN: translation factor activity, nucleic acid binding, copper ion binding, translation elongation factor activity; INVOLVED IN: response to cold; LOCATED IN: cytosol, nucleolus, chloroplast, plasma membrane, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT3G12915.1); Has 64297 Blast hits to 57476 proteins in 4618 species: Archae - 1324; Bacteria - 41101; Metazoa - 3172; Fungi - 1934; Plants - 1269; Viruses - 1; Other Eukaryotes - 15496 (source: NCBI BLink). & (o23755|ef2_betvu : 995.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (gnl|cdd|35690 : 824.0) no description available & (gnl|cdd|82272 : 423.0) no description available & (reliability: 2006.0) & (original description: Putative EF2, Description = Elongation factor 2, PFAM = PF03764;PF14492;PF00679;PF03144)' T '29.2.4' 'protein.synthesis.elongation' 'niben044scf00021317ctg000_5639-16638' '(gnl|cdd|80474 : 726.0) no description available & (at4g02930 : 725.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: translation elongation factor activity, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, bacterial/organelle (InterPro:IPR004541), Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog E1B (TAIR:AT4G20360.1); Has 89361 Blast hits to 89296 proteins in 17600 species: Archae - 1195; Bacteria - 40691; Metazoa - 19476; Fungi - 9897; Plants - 2075; Viruses - 6; Other Eukaryotes - 16021 (source: NCBI BLink). & (gnl|cdd|35681 : 685.0) no description available & (p56292|eftu_chlvu : 498.0) Elongation factor Tu (EF-Tu) - Chlorella vulgaris (Green alga) & (reliability: 1450.0) & (original description: Putative TUFA, Description = Elongation factor Tu, mitochondrial, PFAM = PF03143;PF00009;PF03144)' T '29.2.4' 'protein.synthesis.elongation' 'niben044scf00023911ctg008_1495-9493' '(at2g38560 : 321.0) Encodes RNA polymerase II transcript elongation factor TFIIS. Complements yeast TFIIS mutation. Mutant plants display essentially normal development, but they flower slightly earlier than the wild type and show clearly reduced seed dormancy.; transcript elongation factor IIS (TFIIS); CONTAINS InterPro DOMAIN/s: Zinc finger, TFIIS-type (InterPro:IPR001222), Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type (InterPro:IPR003617), Transcription elongation factor S-II, central domain (InterPro:IPR003618), Transcription factor IIS, N-terminal (InterPro:IPR017923), Transcription elongation factor S-IIM (InterPro:IPR017890), Transcription elongation factor, IIS (InterPro:IPR016492), Transcription elongation factor, TFIIS (InterPro:IPR006289), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G42730.1); Has 1858 Blast hits to 1830 proteins in 294 species: Archae - 58; Bacteria - 2; Metazoa - 702; Fungi - 370; Plants - 279; Viruses - 52; Other Eukaryotes - 395 (source: NCBI BLink). & (gnl|cdd|36321 : 181.0) no description available & (gnl|cdd|87289 : 119.0) no description available & (reliability: 642.0) & (original description: Putative BnaA03g17870D, Description = BnaA03g17870D protein, PFAM = PF08711;PF01096;PF07500)' T '29.2.4' 'protein.synthesis.elongation' 'niben044scf00024768ctg003_3310-12625' '(at5g60390 : 279.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o64937|ef1a_orysa : 279.0) Elongation factor 1-alpha (EF-1-alpha) - Oryza sativa (Rice) & (gnl|cdd|57966 : 270.0) no description available & (gnl|cdd|35275 : 229.0) no description available & (reliability: 558.0) & (original description: Putative tef1, Description = Tef1 protein, PFAM = PF00009)' T '29.2.4' 'protein.synthesis.elongation' 'niben044scf00024768ctg014_131-3683' '(p43643|ef1a_tobac : 855.0) Elongation factor 1-alpha (EF-1-alpha) (Vitronectin-like adhesion protein 1) (PVN1) - Nicotiana tabacum (Common tobacco) & (at5g60390 : 851.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34853 : 596.0) no description available & (gnl|cdd|35275 : 525.0) no description available & (reliability: 1702.0) & (original description: Putative ef1a, Description = Elongation factor 1-alpha, PFAM = PF03143;PF03144;PF00009)' T '29.2.4' 'protein.synthesis.elongation' 'niben044scf00025848ctg004_1-2871' '(at4g29060 : 614.0) embryo defective 2726 (emb2726); FUNCTIONS IN: RNA binding, translation elongation factor activity; INVOLVED IN: translational elongation, response to cadmium ion, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Translation elongation factor EFTs/EF1B (InterPro:IPR001816), Translation elongation factor EFTs/EF1B, dimerisation (InterPro:IPR014039), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation elongation factor Ts, conserved site (InterPro:IPR018101), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: translation elongation factor Ts (EF-Ts), putative (TAIR:AT4G11120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84085 : 280.0) no description available & (gnl|cdd|36289 : 234.0) no description available & (reliability: 1228.0) & (original description: Putative etsf, Description = EF-Ts, PFAM = PF00889;PF00889)' T '29.2.4' 'protein.synthesis.elongation' 'niben044scf00026606ctg000_1675-9183' '(at1g07910 : 221.0) Encodes a tRNA ligase that resembles the yeast Trl1 RNA ligase in structure and function but very different in sequence. Like Trl1, AtRNL consists of two domains ó an N-terminal ligase component and a C-terminal 5'-kinase/2',3'-cyclic phosphodiesterase (CPD) componentó that can function in tRNA splicing in vivo when expressed as separate polypeptides. Requires a 2'-PO4 end for tRNA splicing in vivo.; RNAligase (RNL); CONTAINS InterPro DOMAIN/s: tRNA ligase, phosphodiesterase, fungi (InterPro:IPR015965); Has 209 Blast hits to 196 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 200; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative RNL, Description = Translation elongation factor EF-1 alpha, PFAM = )' T '29.2.4' 'protein.synthesis.elongation' 'niben044scf00027807ctg000_22951-26189' '(gnl|cdd|79288 : 751.0) no description available & (p68158|eftu_tobac : 720.0) Elongation factor Tu, chloroplast precursor (EF-Tu) - Nicotiana tabacum (Common tobacco) & (at4g20360 : 671.0) RAB GTPase homolog E1B (RABE1b); FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: peptidyl-cysteine S-nitrosylation; LOCATED IN: in 9 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, bacterial/organelle (InterPro:IPR004541), Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT4G02930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35681 : 633.0) no description available & (reliability: 1342.0) & (original description: Putative TUFA, Description = Elongation factor TuA, chloroplastic, PFAM = PF03144;PF03143;PF00009)' T '29.2.4' 'protein.synthesis.elongation' 'niben044scf00032989ctg007_2339-15301' '(at2g31060 : 512.0) elongation factor family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein TypA (InterPro:IPR006298), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: elongation factor family protein (TAIR:AT5G13650.2). & (gnl|cdd|31410 : 400.0) no description available & (gnl|cdd|35683 : 366.0) no description available & (reliability: 1024.0) & (original description: Putative bipA, Description = GTP-binding protein TypA, PFAM = PF00009)' T '29.2.4' 'protein.synthesis.elongation' 'niben044scf00037026ctg003_24673-28204' '(p43643|ef1a_tobac : 887.0) Elongation factor 1-alpha (EF-1-alpha) (Vitronectin-like adhesion protein 1) (PVN1) - Nicotiana tabacum (Common tobacco) & (at5g60390 : 870.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34853 : 594.0) no description available & (gnl|cdd|35275 : 523.0) no description available & (reliability: 1740.0) & (original description: Putative ef1a, Description = Elongation factor 1-alpha, PFAM = PF00009;PF03144;PF03143)' T '29.2.4' 'protein.synthesis.elongation' 'niben044scf00052018ctg000_232-2660' '(at2g45030 : 192.0) Translation elongation factor EFG/EF2 protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2 (InterPro:IPR004540), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Elongation factor G/III/V (InterPro:IPR009022), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EFG/EF2 protein (TAIR:AT1G45332.1); Has 86156 Blast hits to 73724 proteins in 9924 species: Archae - 905; Bacteria - 48991; Metazoa - 8060; Fungi - 6843; Plants - 1619; Viruses - 3; Other Eukaryotes - 19735 (source: NCBI BLink). & (q9fe64|efgm_orysa : 165.0) Elongation factor G, mitochondrial precursor (mEF-G) - Oryza sativa (Rice) & (gnl|cdd|35686 : 147.0) no description available & (gnl|cdd|57969 : 135.0) no description available & (reliability: 384.0) & (original description: Putative efg1, Description = EF-Gmt, PFAM = PF00009)' T '29.2.4' 'protein.synthesis.elongation' 'niben101ctg15666_1-4155' '(at4g26310 : 134.0) elongation factor P (EF-P) family protein; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation elongation factor P/YeiP, central (InterPro:IPR001059), Translation elongation factor, KOW-like (InterPro:IPR013185), Translation protein SH3-like, subgroup (InterPro:IPR014722); BEST Arabidopsis thaliana protein match is: elongation factor P (EF-P) family protein (TAIR:AT3G08740.1). & (gnl|cdd|80699 : 115.0) no description available & (reliability: 268.0) & (original description: Putative efp, Description = Elongation factor P (EF-P) family protein, PFAM = PF01132;PF08207)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf00077_16422-21554' '(gnl|cdd|37450 : 162.0) no description available & (at3g12390 : 140.0) Nascent polypeptide-associated complex (NAC), alpha subunit family protein; INVOLVED IN: response to salt stress; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: nascent polypeptide-associated complex subunit alpha-like protein 3 (TAIR:AT5G13850.1); Has 5275 Blast hits to 2514 proteins in 367 species: Archae - 69; Bacteria - 684; Metazoa - 1880; Fungi - 785; Plants - 552; Viruses - 60; Other Eukaryotes - 1245 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative aic, Description = Nascent polypeptide-associated complex subunit alpha, PFAM = PF01849)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf00192_107068-135084' '(at2g31060 : 964.0) elongation factor family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein TypA (InterPro:IPR006298), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: elongation factor family protein (TAIR:AT5G13650.2). & (gnl|cdd|31410 : 754.0) no description available & (gnl|cdd|35683 : 602.0) no description available & (reliability: 1928.0) & (original description: Putative bipA, Description = GTP-binding protein, PFAM = PF00009;PF00679)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf00800_469722-483467' '(at5g13650 : 1101.0) elongation factor family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), GTP-binding protein TypA (InterPro:IPR006298), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: elongation factor family protein (TAIR:AT2G31060.2); Has 76334 Blast hits to 67578 proteins in 6162 species: Archae - 1271; Bacteria - 47471; Metazoa - 3896; Fungi - 2458; Plants - 1891; Viruses - 1; Other Eukaryotes - 19346 (source: NCBI BLink). & (gnl|cdd|31410 : 819.0) no description available & (gnl|cdd|35683 : 631.0) no description available & (o23755|ef2_betvu : 102.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (reliability: 2202.0) & (original description: Putative typA, Description = GTP-binding protein, PFAM = PF03144;PF00679;PF00009)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf00878_296317-315353' '(at2g45030 : 1296.0) Translation elongation factor EFG/EF2 protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2 (InterPro:IPR004540), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Elongation factor G/III/V (InterPro:IPR009022), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EFG/EF2 protein (TAIR:AT1G45332.1); Has 86156 Blast hits to 73724 proteins in 9924 species: Archae - 905; Bacteria - 48991; Metazoa - 8060; Fungi - 6843; Plants - 1619; Viruses - 3; Other Eukaryotes - 19735 (source: NCBI BLink). & (q9fe64|efgm_orysa : 1261.0) Elongation factor G, mitochondrial precursor (mEF-G) - Oryza sativa (Rice) & (gnl|cdd|35686 : 1068.0) no description available & (gnl|cdd|84252 : 880.0) no description available & (reliability: 2592.0) & (original description: Putative MEFG1, Description = Elongation factor G-1, mitochondrial, PFAM = PF14492;PF00679;PF03764;PF00009;PF03144)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf00934_78526-91555' '(at4g02930 : 733.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: translation elongation factor activity, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, bacterial/organelle (InterPro:IPR004541), Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog E1B (TAIR:AT4G20360.1); Has 89361 Blast hits to 89296 proteins in 17600 species: Archae - 1195; Bacteria - 40691; Metazoa - 19476; Fungi - 9897; Plants - 2075; Viruses - 6; Other Eukaryotes - 16021 (source: NCBI BLink). & (gnl|cdd|80474 : 727.0) no description available & (gnl|cdd|35681 : 692.0) no description available & (p56292|eftu_chlvu : 498.0) Elongation factor Tu (EF-Tu) - Chlorella vulgaris (Green alga) & (reliability: 1466.0) & (original description: Putative TUFA, Description = Elongation factor Tu, mitochondrial, PFAM = PF00009;PF03144;PF03143)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf01239_396290-399789' '(gnl|cdd|37450 : 188.0) no description available & (at3g49470 : 160.0) nascent polypeptide-associated complex subunit alpha-like protein 2 (NACA2); CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: Nascent polypeptide-associated complex (NAC), alpha subunit family protein (TAIR:AT4G10480.1); Has 1390 Blast hits to 1373 proteins in 295 species: Archae - 27; Bacteria - 8; Metazoa - 613; Fungi - 295; Plants - 175; Viruses - 7; Other Eukaryotes - 265 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative aic, Description = Nascent polypeptide-associated complex subunit alpha, PFAM = PF01849)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf01552_519248-523253' '(q6yw46|ef1g2_orysa : 600.0) Elongation factor 1-gamma 2 (EF-1-gamma 2) (eEF-1B gamma 2) - Oryza sativa (Rice) & (at1g09640 : 555.0) Translation elongation factor EF1B, gamma chain; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Translation elongation factor EF1B, gamma chain, conserved (InterPro:IPR001662), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1B, gamma chain (TAIR:AT1G57720.2). & (gnl|cdd|36840 : 217.0) no description available & (gnl|cdd|48108 : 144.0) no description available & (reliability: 1110.0) & (original description: Putative GTSG, Description = Elongation factor 1-gamma 1, PFAM = PF02798;PF00043;PF00647)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf01777_378454-383163' '(at1g56070 : 1576.0) encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (LOS1); FUNCTIONS IN: translation factor activity, nucleic acid binding, copper ion binding, translation elongation factor activity; INVOLVED IN: response to cold; LOCATED IN: cytosol, nucleolus, chloroplast, plasma membrane, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT3G12915.1); Has 64297 Blast hits to 57476 proteins in 4618 species: Archae - 1324; Bacteria - 41101; Metazoa - 3172; Fungi - 1934; Plants - 1269; Viruses - 1; Other Eukaryotes - 15496 (source: NCBI BLink). & (o23755|ef2_betvu : 1549.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (gnl|cdd|35690 : 1268.0) no description available & (gnl|cdd|82272 : 639.0) no description available & (reliability: 3152.0) & (original description: Putative ef2, Description = Elongation factor EF-2, PFAM = PF03764;PF00679;PF14492;PF03144;PF00009)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf01848_418857-422449' '(at1g56070 : 1004.0) encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (LOS1); FUNCTIONS IN: translation factor activity, nucleic acid binding, copper ion binding, translation elongation factor activity; INVOLVED IN: response to cold; LOCATED IN: cytosol, nucleolus, chloroplast, plasma membrane, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT3G12915.1); Has 64297 Blast hits to 57476 proteins in 4618 species: Archae - 1324; Bacteria - 41101; Metazoa - 3172; Fungi - 1934; Plants - 1269; Viruses - 1; Other Eukaryotes - 15496 (source: NCBI BLink). & (o23755|ef2_betvu : 994.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (gnl|cdd|35690 : 823.0) no description available & (gnl|cdd|82272 : 424.0) no description available & (reliability: 2008.0) & (original description: Putative eef2, Description = Elongation factor 2, PFAM = PF03764;PF14492;PF00679;PF03144)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf01998_298099-304857' '(at1g56070 : 1585.0) encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (LOS1); FUNCTIONS IN: translation factor activity, nucleic acid binding, copper ion binding, translation elongation factor activity; INVOLVED IN: response to cold; LOCATED IN: cytosol, nucleolus, chloroplast, plasma membrane, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT3G12915.1); Has 64297 Blast hits to 57476 proteins in 4618 species: Archae - 1324; Bacteria - 41101; Metazoa - 3172; Fungi - 1934; Plants - 1269; Viruses - 1; Other Eukaryotes - 15496 (source: NCBI BLink). & (o23755|ef2_betvu : 1558.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (gnl|cdd|35690 : 1281.0) no description available & (gnl|cdd|82272 : 640.0) no description available & (reliability: 3170.0) & (original description: Putative LOS1, Description = Elongation factor 2, PFAM = PF14492;PF00679;PF03764;PF03144;PF00009)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf02059_84372-91012' '(at1g06220 : 1708.0) Encodes a protein with similarity to splicing factor Snu114. Snu114 is thought to be involved in activation of the splicosome. Loss of GFA1 function results in reduced female fertility. Approximately 50% of ovules abort due to defects in the female gametophyte. In mutant gametophytes antipodal cells express egg cell markers suggesting a defect in specification of cell fate.GFA1 is also required to restrict the expression of LIS.; MATERNAL EFFECT EMBRYO ARREST 5 (MEE5); FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: regulation of embryo sac egg cell differentiation, embryo development ending in seed dormancy; LOCATED IN: nuclear speck, cell wall, plasma membrane; EXPRESSED IN: whole plant, cultured cell; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT5G25230.1); Has 61019 Blast hits to 57504 proteins in 4658 species: Archae - 1314; Bacteria - 38464; Metazoa - 2393; Fungi - 1714; Plants - 1333; Viruses - 1; Other Eukaryotes - 15800 (source: NCBI BLink). & (gnl|cdd|35689 : 1435.0) no description available & (o23755|ef2_betvu : 632.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (gnl|cdd|30828 : 428.0) no description available & (reliability: 3416.0) & (original description: Putative CLO, Description = 110 kDa U5 small nuclear ribonucleoprotein component CLO, PFAM = PF00679;PF16004;PF03144;PF03764;PF00009)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf02652_233992-238318' '(at1g12420 : 555.0) ACT domain repeat 8 (ACR8); CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 7 (TAIR:AT4G22780.1); Has 2013 Blast hits to 1422 proteins in 371 species: Archae - 0; Bacteria - 1118; Metazoa - 0; Fungi - 0; Plants - 487; Viruses - 0; Other Eukaryotes - 408 (source: NCBI BLink). & (gnl|cdd|80396 : 128.0) no description available & (reliability: 1054.0) & (original description: Putative ACR8, Description = ACT domain-containing protein ACR8, PFAM = PF01842;PF01842)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf02757_60963-69032' '(at4g29060 : 620.0) embryo defective 2726 (emb2726); FUNCTIONS IN: RNA binding, translation elongation factor activity; INVOLVED IN: translational elongation, response to cadmium ion, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Translation elongation factor EFTs/EF1B (InterPro:IPR001816), Translation elongation factor EFTs/EF1B, dimerisation (InterPro:IPR014039), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation elongation factor Ts, conserved site (InterPro:IPR018101), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: translation elongation factor Ts (EF-Ts), putative (TAIR:AT4G11120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84085 : 288.0) no description available & (gnl|cdd|36289 : 231.0) no description available & (reliability: 1240.0) & (original description: Putative etsf, Description = EF-Ts, PFAM = PF00889;PF00889;PF00575;PF00575)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf03069_446974-452047' '(p29545|ef1b_orysa : 232.0) Elongation factor 1-beta (EF-1-beta) (Elongation factor 1B-alpha 2) (eEF-1B alpha) (Elongation factor 1-beta') (EF-1-beta') - Oryza sativa (Rice) & (gnl|cdd|36881 : 226.0) no description available & (at5g19510 : 225.0) Translation elongation factor EF1B/ribosomal protein S6 family protein; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation, defense response to bacterium; LOCATED IN: apoplast, eukaryotic translation elongation factor 1 complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange (InterPro:IPR014038), Translation elongation factor EF1B, beta/delta chains, conserved site (InterPro:IPR001326); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6 (TAIR:AT5G12110.1); Has 955 Blast hits to 953 proteins in 266 species: Archae - 0; Bacteria - 2; Metazoa - 477; Fungi - 150; Plants - 165; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (gnl|cdd|84994 : 108.0) no description available & (reliability: 450.0) & (original description: Putative eef1b, Description = Elongation factor 1-beta, PFAM = PF00736)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf03142_246006-254200' '(at4g29060 : 613.0) embryo defective 2726 (emb2726); FUNCTIONS IN: RNA binding, translation elongation factor activity; INVOLVED IN: translational elongation, response to cadmium ion, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Translation elongation factor EFTs/EF1B (InterPro:IPR001816), Translation elongation factor EFTs/EF1B, dimerisation (InterPro:IPR014039), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation elongation factor Ts, conserved site (InterPro:IPR018101), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: translation elongation factor Ts (EF-Ts), putative (TAIR:AT4G11120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84085 : 289.0) no description available & (gnl|cdd|36289 : 232.0) no description available & (reliability: 1226.0) & (original description: Putative etsf, Description = EF-Ts, PFAM = PF00889;PF00889;PF00575;PF00575)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf03350_3725-8699' '(q6yw46|ef1g2_orysa : 587.0) Elongation factor 1-gamma 2 (EF-1-gamma 2) (eEF-1B gamma 2) - Oryza sativa (Rice) & (at1g09640 : 540.0) Translation elongation factor EF1B, gamma chain; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Translation elongation factor EF1B, gamma chain, conserved (InterPro:IPR001662), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1B, gamma chain (TAIR:AT1G57720.2). & (gnl|cdd|36840 : 217.0) no description available & (gnl|cdd|48108 : 146.0) no description available & (reliability: 1080.0) & (original description: Putative efa1G, Description = EF1Bgamma class glutathione S-transferase, PFAM = PF00043;PF02798;PF00647)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf03374_744298-749821' '(at1g12420 : 551.0) ACT domain repeat 8 (ACR8); CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 7 (TAIR:AT4G22780.1); Has 2013 Blast hits to 1422 proteins in 371 species: Archae - 0; Bacteria - 1118; Metazoa - 0; Fungi - 0; Plants - 487; Viruses - 0; Other Eukaryotes - 408 (source: NCBI BLink). & (gnl|cdd|80394 : 115.0) no description available & (reliability: 1020.0) & (original description: Putative ACR8, Description = ACT domain-containing protein ACR8, PFAM = PF01842;PF01842)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf04099_354424-357878' '(gnl|cdd|79288 : 761.0) no description available & (q43364|eftub_nicsy : 733.0) Elongation factor TuB, chloroplast precursor (EF-TuB) - Nicotiana sylvestris (Wood tobacco) & (at4g20360 : 691.0) RAB GTPase homolog E1B (RABE1b); FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: peptidyl-cysteine S-nitrosylation; LOCATED IN: in 9 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, bacterial/organelle (InterPro:IPR004541), Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT4G02930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35681 : 649.0) no description available & (reliability: 1382.0) & (original description: Putative TUFB, Description = Elongation factor TuB, chloroplastic, PFAM = PF00009;PF03144;PF03143)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf04099_991779-996892' '(gnl|cdd|37450 : 188.0) no description available & (at3g49470 : 154.0) nascent polypeptide-associated complex subunit alpha-like protein 2 (NACA2); CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: Nascent polypeptide-associated complex (NAC), alpha subunit family protein (TAIR:AT4G10480.1); Has 1390 Blast hits to 1373 proteins in 295 species: Archae - 27; Bacteria - 8; Metazoa - 613; Fungi - 295; Plants - 175; Viruses - 7; Other Eukaryotes - 265 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative aic, Description = Nascent polypeptide-associated complex subunit alpha, PFAM = PF01849)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf04184_183653-187272' '(at1g07910 : 202.0) Encodes a tRNA ligase that resembles the yeast Trl1 RNA ligase in structure and function but very different in sequence. Like Trl1, AtRNL consists of two domains ó an N-terminal ligase component and a C-terminal 5'-kinase/2',3'-cyclic phosphodiesterase (CPD) componentó that can function in tRNA splicing in vivo when expressed as separate polypeptides. Requires a 2'-PO4 end for tRNA splicing in vivo.; RNAligase (RNL); CONTAINS InterPro DOMAIN/s: tRNA ligase, phosphodiesterase, fungi (InterPro:IPR015965); Has 209 Blast hits to 196 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 200; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative RNL, Description = AT.I.24-9 protein, PFAM = )' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf04639_1222484-1264848' '(at1g07910 : 1490.0) Encodes a tRNA ligase that resembles the yeast Trl1 RNA ligase in structure and function but very different in sequence. Like Trl1, AtRNL consists of two domains ó an N-terminal ligase component and a C-terminal 5'-kinase/2',3'-cyclic phosphodiesterase (CPD) componentó that can function in tRNA splicing in vivo when expressed as separate polypeptides. Requires a 2'-PO4 end for tRNA splicing in vivo.; RNAligase (RNL); CONTAINS InterPro DOMAIN/s: tRNA ligase, phosphodiesterase, fungi (InterPro:IPR015965); Has 209 Blast hits to 196 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 200; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 2980.0) & (original description: Putative RNL, Description = Translation elongation factor EF-1 alpha, PFAM = )' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf04779_250150-256538' '(p34811|efgc_soybn : 1292.0) Elongation factor G, chloroplast precursor (EF-G) - Glycine max (Soybean) & (at1g62750 : 1270.0) Nuclear encoded protein consists of the five domains conserved in EF-G proteins, with two GTP-binding sites in the first domain, and an additional transit peptide at the N-terminus. Localized in chloroplasts. Point mutation results in a delay in the onset of germination. At early developmental stage embryos still contain undifferentiated proplastids. The greening of cotyledons is severely impaired in light-grown mutant sco1 seedlings, whereas the following true leaves develop normally as in wild-type plants.; SNOWY COTYLEDON 1 (SCO1); FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation elongation factor activity, ATP binding; INVOLVED IN: post-embryonic development, chloroplast organization, seed germination; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFG/EF2 (InterPro:IPR004540), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EFG/EF2 protein (TAIR:AT2G45030.1); Has 79823 Blast hits to 67706 proteins in 7071 species: Archae - 929; Bacteria - 47320; Metazoa - 4453; Fungi - 5428; Plants - 1613; Viruses - 3; Other Eukaryotes - 20077 (source: NCBI BLink). & (gnl|cdd|80442 : 1203.0) no description available & (gnl|cdd|35686 : 962.0) no description available & (reliability: 2540.0) & (original description: Putative fusA, Description = EF-G, PFAM = PF03144;PF00009;PF00679;PF14492;PF03764)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf04990_25835-34090' '(at2g38560 : 320.0) Encodes RNA polymerase II transcript elongation factor TFIIS. Complements yeast TFIIS mutation. Mutant plants display essentially normal development, but they flower slightly earlier than the wild type and show clearly reduced seed dormancy.; transcript elongation factor IIS (TFIIS); CONTAINS InterPro DOMAIN/s: Zinc finger, TFIIS-type (InterPro:IPR001222), Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type (InterPro:IPR003617), Transcription elongation factor S-II, central domain (InterPro:IPR003618), Transcription factor IIS, N-terminal (InterPro:IPR017923), Transcription elongation factor S-IIM (InterPro:IPR017890), Transcription elongation factor, IIS (InterPro:IPR016492), Transcription elongation factor, TFIIS (InterPro:IPR006289), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G42730.1); Has 1858 Blast hits to 1830 proteins in 294 species: Archae - 58; Bacteria - 2; Metazoa - 702; Fungi - 370; Plants - 279; Viruses - 52; Other Eukaryotes - 395 (source: NCBI BLink). & (gnl|cdd|36321 : 180.0) no description available & (gnl|cdd|87289 : 120.0) no description available & (reliability: 640.0) & (original description: Putative TFIIS, Description = Transcription elongation factor TFIIS, PFAM = PF01096;PF07500;PF08711)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf05437_309898-313508' '(p68158|eftu_tobac : 798.0) Elongation factor Tu, chloroplast precursor (EF-Tu) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79288 : 760.0) no description available & (at4g20360 : 688.0) RAB GTPase homolog E1B (RABE1b); FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: peptidyl-cysteine S-nitrosylation; LOCATED IN: in 9 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, bacterial/organelle (InterPro:IPR004541), Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT4G02930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35681 : 646.0) no description available & (reliability: 1376.0) & (original description: Putative TUFA, Description = Elongation factor TuA, chloroplastic, PFAM = PF00009;PF03143;PF03144)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf06754_33066-38092' '(gnl|cdd|37450 : 187.0) no description available & (at3g12390 : 152.0) Nascent polypeptide-associated complex (NAC), alpha subunit family protein; INVOLVED IN: response to salt stress; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: nascent polypeptide-associated complex subunit alpha-like protein 3 (TAIR:AT5G13850.1); Has 5275 Blast hits to 2514 proteins in 367 species: Archae - 69; Bacteria - 684; Metazoa - 1880; Fungi - 785; Plants - 552; Viruses - 60; Other Eukaryotes - 1245 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative aic, Description = Nascent polypeptide-associated complex subunit alpha, PFAM = PF01849)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf07023_465925-470130' '(gnl|cdd|37450 : 191.0) no description available & (at3g12390 : 175.0) Nascent polypeptide-associated complex (NAC), alpha subunit family protein; INVOLVED IN: response to salt stress; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: nascent polypeptide-associated complex subunit alpha-like protein 3 (TAIR:AT5G13850.1); Has 5275 Blast hits to 2514 proteins in 367 species: Archae - 69; Bacteria - 684; Metazoa - 1880; Fungi - 785; Plants - 552; Viruses - 60; Other Eukaryotes - 1245 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative aic, Description = Nascent polypeptide-associated complex subunit alpha, PFAM = PF01849)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf07445_71454-77874' '(at3g22980 : 1454.0) Ribosomal protein S5/Elongation factor G/III/V family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT1G56070.1); Has 75542 Blast hits to 60298 proteins in 6538 species: Archae - 1481; Bacteria - 47710; Metazoa - 4520; Fungi - 3401; Plants - 1472; Viruses - 1; Other Eukaryotes - 16957 (source: NCBI BLink). & (gnl|cdd|35688 : 981.0) no description available & (o23755|ef2_betvu : 442.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (gnl|cdd|57968 : 319.0) no description available & (reliability: 2908.0) & (original description: Putative At3g22980, Description = Ribosomal protein S5/Elongation factor G/III/V family protein, PFAM = PF00009;PF03144;PF00679)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf07591_112086-117261' '(at5g10630 : 541.0) Translation elongation factor EF1A/initiation factor IF2gamma family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Zinc finger, RanBP2-type (InterPro:IPR001876), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT1G18070.2). & (gnl|cdd|35679 : 408.0) no description available & (gnl|cdd|34853 : 342.0) no description available & (o24534|ef1a_vicfa : 220.0) Elongation factor 1-alpha (EF-1-alpha) - Vicia faba (Broad bean) & (reliability: 1082.0) & (original description: Putative EFG4, Description = GTP-binding elongation factor, PFAM = PF00009;PF03143)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf07951_346458-352779' '(at3g08740 : 313.0) elongation factor P (EF-P) family protein; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor P (InterPro:IPR011768), Translation elongation factor P/YeiP, conserved site (InterPro:IPR013852), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation elongation factor, KOW-like (InterPro:IPR013185), Translation protein SH3-like, subgroup (InterPro:IPR014722), Elongation factor P, C-terminal (InterPro:IPR015365), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation elongation factor P/YeiP, central (InterPro:IPR001059), Translation elongation factor P/YeiP (InterPro:IPR020599); BEST Arabidopsis thaliana protein match is: elongation factor P (EF-P) family protein (TAIR:AT4G26310.1); Has 10499 Blast hits to 10498 proteins in 2700 species: Archae - 4; Bacteria - 7892; Metazoa - 1; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 2521 (source: NCBI BLink). & (gnl|cdd|80699 : 257.0) no description available & (reliability: 626.0) & (original description: Putative efp, Description = Elongation factor P, PFAM = PF08207;PF09285;PF01132)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf08179_59359-63209' '(at2g38560 : 323.0) Encodes RNA polymerase II transcript elongation factor TFIIS. Complements yeast TFIIS mutation. Mutant plants display essentially normal development, but they flower slightly earlier than the wild type and show clearly reduced seed dormancy.; transcript elongation factor IIS (TFIIS); CONTAINS InterPro DOMAIN/s: Zinc finger, TFIIS-type (InterPro:IPR001222), Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type (InterPro:IPR003617), Transcription elongation factor S-II, central domain (InterPro:IPR003618), Transcription factor IIS, N-terminal (InterPro:IPR017923), Transcription elongation factor S-IIM (InterPro:IPR017890), Transcription elongation factor, IIS (InterPro:IPR016492), Transcription elongation factor, TFIIS (InterPro:IPR006289), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G42730.1); Has 1858 Blast hits to 1830 proteins in 294 species: Archae - 58; Bacteria - 2; Metazoa - 702; Fungi - 370; Plants - 279; Viruses - 52; Other Eukaryotes - 395 (source: NCBI BLink). & (gnl|cdd|36321 : 201.0) no description available & (gnl|cdd|87289 : 119.0) no description available & (reliability: 646.0) & (original description: Putative TFIIS, Description = Transcription elongation factor TFIIS, PFAM = PF01096;PF08711;PF07500)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf08250_420941-426057' '(p29545|ef1b_orysa : 237.0) Elongation factor 1-beta (EF-1-beta) (Elongation factor 1B-alpha 2) (eEF-1B alpha) (Elongation factor 1-beta') (EF-1-beta') - Oryza sativa (Rice) & (at5g12110 : 234.0) Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: eukaryotic translation elongation factor 1 complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange (InterPro:IPR014038), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Translation elongation factor EF1B, beta/delta chains, conserved site (InterPro:IPR001326); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1B/ribosomal protein S6 family protein (TAIR:AT5G19510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36881 : 228.0) no description available & (gnl|cdd|84994 : 111.0) no description available & (reliability: 468.0) & (original description: Putative eef1b, Description = Elongation factor 1-beta, PFAM = PF00736)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf08618_135957-139376' '(p43643|ef1a_tobac : 857.0) Elongation factor 1-alpha (EF-1-alpha) (Vitronectin-like adhesion protein 1) (PVN1) - Nicotiana tabacum (Common tobacco) & (at5g60390 : 848.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34853 : 598.0) no description available & (gnl|cdd|35275 : 525.0) no description available & (reliability: 1696.0) & (original description: Putative ef1a, Description = Elongation factor 1-alpha, PFAM = PF03143;PF00009;PF03144)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf08618_136939-146940' '(at5g60390 : 286.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o64937|ef1a_orysa : 286.0) Elongation factor 1-alpha (EF-1-alpha) - Oryza sativa (Rice) & (gnl|cdd|57966 : 270.0) no description available & (gnl|cdd|35275 : 229.0) no description available & (reliability: 572.0) & (original description: Putative tef1, Description = Tef1 protein, PFAM = PF00009)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf09387_325913-331953' '(p34811|efgc_soybn : 1311.0) Elongation factor G, chloroplast precursor (EF-G) - Glycine max (Soybean) & (at1g62750 : 1286.0) Nuclear encoded protein consists of the five domains conserved in EF-G proteins, with two GTP-binding sites in the first domain, and an additional transit peptide at the N-terminus. Localized in chloroplasts. Point mutation results in a delay in the onset of germination. At early developmental stage embryos still contain undifferentiated proplastids. The greening of cotyledons is severely impaired in light-grown mutant sco1 seedlings, whereas the following true leaves develop normally as in wild-type plants.; SNOWY COTYLEDON 1 (SCO1); FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation elongation factor activity, ATP binding; INVOLVED IN: post-embryonic development, chloroplast organization, seed germination; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFG/EF2 (InterPro:IPR004540), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EFG/EF2 protein (TAIR:AT2G45030.1); Has 79823 Blast hits to 67706 proteins in 7071 species: Archae - 929; Bacteria - 47320; Metazoa - 4453; Fungi - 5428; Plants - 1613; Viruses - 3; Other Eukaryotes - 20077 (source: NCBI BLink). & (gnl|cdd|80442 : 1218.0) no description available & (gnl|cdd|35686 : 978.0) no description available & (reliability: 2572.0) & (original description: Putative fusA1, Description = Elongation factor G-1, chloroplastic, PFAM = PF03764;PF00679;PF03144;PF00009;PF14492)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf11037_278323-290503' '(at4g02930 : 721.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: translation elongation factor activity, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, bacterial/organelle (InterPro:IPR004541), Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog E1B (TAIR:AT4G20360.1); Has 89361 Blast hits to 89296 proteins in 17600 species: Archae - 1195; Bacteria - 40691; Metazoa - 19476; Fungi - 9897; Plants - 2075; Viruses - 6; Other Eukaryotes - 16021 (source: NCBI BLink). & (gnl|cdd|80474 : 720.0) no description available & (gnl|cdd|35681 : 683.0) no description available & (p56292|eftu_chlvu : 498.0) Elongation factor Tu (EF-Tu) - Chlorella vulgaris (Green alga) & (reliability: 1442.0) & (original description: Putative TUFA, Description = Elongation factor Tu, mitochondrial, PFAM = PF00009;PF03143;PF03144)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf11491_283198-290941' '(at5g10630 : 676.0) Translation elongation factor EF1A/initiation factor IF2gamma family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Zinc finger, RanBP2-type (InterPro:IPR001876), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT1G18070.2). & (gnl|cdd|35679 : 497.0) no description available & (gnl|cdd|34853 : 411.0) no description available & (p29521|ef1a1_dauca : 273.0) Elongation factor 1-alpha (EF-1-alpha) - Daucus carota (Carrot) & (reliability: 1352.0) & (original description: Putative efg4, Description = HBS1-like protein, PFAM = PF03143;PF00009)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf11767_75704-90177' '(at4g11120 : 452.0) translation elongation factor Ts (EF-Ts), putative; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor Ts, conserved site (InterPro:IPR018101), Translation elongation factor EFTs/EF1B (InterPro:IPR001816), UBA-like (InterPro:IPR009060), Translation elongation factor EFTs/EF1B, dimerisation (InterPro:IPR014039); BEST Arabidopsis thaliana protein match is: elongation factor Ts family protein (TAIR:AT4G29060.1); Has 9471 Blast hits to 8571 proteins in 2664 species: Archae - 0; Bacteria - 5908; Metazoa - 120; Fungi - 25; Plants - 215; Viruses - 0; Other Eukaryotes - 3203 (source: NCBI BLink). & (gnl|cdd|82964 : 247.0) no description available & (gnl|cdd|36289 : 212.0) no description available & (reliability: 904.0) & (original description: Putative EFTS, Description = Elongation factor Ts, mitochondrial, PFAM = PF00889)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf12941_148382-150863' '(o24534|ef1a_vicfa : 268.0) Elongation factor 1-alpha (EF-1-alpha) - Vicia faba (Broad bean) & (at5g60390 : 267.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|57966 : 233.0) no description available & (gnl|cdd|35275 : 214.0) no description available & (reliability: 534.0) & (original description: Putative ef1a, Description = Elongation factor 1-alpha, PFAM = PF00009)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf14697_261214-265468' '(gnl|cdd|37450 : 191.0) no description available & (at3g12390 : 174.0) Nascent polypeptide-associated complex (NAC), alpha subunit family protein; INVOLVED IN: response to salt stress; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: nascent polypeptide-associated complex subunit alpha-like protein 3 (TAIR:AT5G13850.1); Has 5275 Blast hits to 2514 proteins in 367 species: Archae - 69; Bacteria - 684; Metazoa - 1880; Fungi - 785; Plants - 552; Viruses - 60; Other Eukaryotes - 1245 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative aic, Description = Nascent polypeptide-associated complex subunit alpha, PFAM = PF01849)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf19454_2158-5661' '(at1g30230 : 259.0) Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: plasma membrane, eukaryotic translation elongation factor 1 complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange (InterPro:IPR014038), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Translation elongation factor EF1B, beta/delta chains, conserved site (InterPro:IPR001326); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1B/ribosomal protein S6 family protein (TAIR:AT2G18110.1); Has 1008 Blast hits to 1006 proteins in 266 species: Archae - 0; Bacteria - 0; Metazoa - 526; Fungi - 158; Plants - 163; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (gnl|cdd|36881 : 236.0) no description available & (o81918|ef1d_betvu : 230.0) Elongation factor 1-delta (EF-1-delta) (Elongation factor 1B-beta) (eEF-1B beta) - Beta vulgaris (Sugar beet) & (gnl|cdd|84994 : 111.0) no description available & (reliability: 518.0) & (original description: Putative eef1b, Description = Elongation factor 1-beta, PFAM = PF00736)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf34389_57929-61348' '(p43643|ef1a_tobac : 887.0) Elongation factor 1-alpha (EF-1-alpha) (Vitronectin-like adhesion protein 1) (PVN1) - Nicotiana tabacum (Common tobacco) & (at5g60390 : 870.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34853 : 597.0) no description available & (gnl|cdd|35275 : 522.0) no description available & (reliability: 1740.0) & (original description: Putative ef1a, Description = Elongation factor 1-alpha, PFAM = PF03144;PF00009;PF03143)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf36076_1-654' '(at5g60390 : 310.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o64937|ef1a_orysa : 310.0) Elongation factor 1-alpha (EF-1-alpha) - Oryza sativa (Rice) & (gnl|cdd|84073 : 223.0) no description available & (gnl|cdd|35679 : 134.0) no description available & (reliability: 620.0) & (original description: Putative ef1a, Description = Elongation factor 1-alpha, PFAM = PF00009)' T '29.2.4' 'protein.synthesis.elongation' 'niben101scf36506_2026-9616' '(at5g10630 : 708.0) Translation elongation factor EF1A/initiation factor IF2gamma family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Zinc finger, RanBP2-type (InterPro:IPR001876), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT1G18070.2). & (gnl|cdd|35679 : 526.0) no description available & (gnl|cdd|34853 : 424.0) no description available & (o64937|ef1a_orysa : 276.0) Elongation factor 1-alpha (EF-1-alpha) - Oryza sativa (Rice) & (reliability: 1416.0) & (original description: Putative efg4, Description = Elongation factor-like protein, PFAM = PF03143;PF00641;PF00641;PF00009)' T '29.2.4.1' 'protein.synthesis.elongation.deoxyhypusine synthase' '' '' '29.2.5' 'protein.synthesis.release' 'nbv0.3scaffold32453_13283-23578' '(at5g36170 : 553.0) Required for normal processing of polycistronic plastidial transcripts; high chlorophyll fluorescent 109 (HCF109); FUNCTIONS IN: translation release factor activity, codon specific, translation release factor activity; INVOLVED IN: translational termination, plastid organization, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352), Peptide chain release factor 2 (InterPro:IPR004374), Peptide chain release factor (InterPro:IPR005139); BEST Arabidopsis thaliana protein match is: Peptide chain release factor 2 (TAIR:AT1G56350.1); Has 16243 Blast hits to 16243 proteins in 2786 species: Archae - 5; Bacteria - 10390; Metazoa - 230; Fungi - 206; Plants - 192; Viruses - 0; Other Eukaryotes - 5220 (source: NCBI BLink). & (gnl|cdd|80710 : 433.0) no description available & (gnl|cdd|37937 : 339.0) no description available & (reliability: 1106.0) & (original description: Putative prfB, Description = Peptide chain release factor 2, PFAM = PF03462;PF00472)' T '29.2.5' 'protein.synthesis.release' 'nbv0.3scaffold46773_2676-10055' '(at3g57190 : 322.0) peptide chain release factor, putative; FUNCTIONS IN: translation release factor activity, codon specific, translation release factor activity; INVOLVED IN: translational termination; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352), Peptide chain release factor (InterPro:IPR005139); BEST Arabidopsis thaliana protein match is: high chlorophyll fluorescent 109 (TAIR:AT5G36170.2); Has 13500 Blast hits to 13496 proteins in 2706 species: Archae - 0; Bacteria - 9313; Metazoa - 113; Fungi - 108; Plants - 181; Viruses - 0; Other Eukaryotes - 3785 (source: NCBI BLink). & (gnl|cdd|37937 : 224.0) no description available & (gnl|cdd|80710 : 213.0) no description available & (reliability: 644.0) & (original description: Putative PRFB3, Description = Peptide chain release factor PrfB3, chloroplastic, PFAM = PF03462;PF00472)' T '29.2.5' 'protein.synthesis.release' 'niben044scf00022460ctg004_7798-16482' '(at5g36170 : 390.0) Required for normal processing of polycistronic plastidial transcripts; high chlorophyll fluorescent 109 (HCF109); FUNCTIONS IN: translation release factor activity, codon specific, translation release factor activity; INVOLVED IN: translational termination, plastid organization, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352), Peptide chain release factor 2 (InterPro:IPR004374), Peptide chain release factor (InterPro:IPR005139); BEST Arabidopsis thaliana protein match is: Peptide chain release factor 2 (TAIR:AT1G56350.1); Has 16243 Blast hits to 16243 proteins in 2786 species: Archae - 5; Bacteria - 10390; Metazoa - 230; Fungi - 206; Plants - 192; Viruses - 0; Other Eukaryotes - 5220 (source: NCBI BLink). & (gnl|cdd|80710 : 320.0) no description available & (gnl|cdd|37937 : 254.0) no description available & (reliability: 780.0) & (original description: Putative prfB, Description = Peptide chain release factor 2, PFAM = PF00472;PF03462)' T '29.2.5' 'protein.synthesis.release' 'niben044scf00058741ctg004_2479-8042' '(at1g62850 : 108.0) Class I peptide chain release factor; FUNCTIONS IN: translation release factor activity; INVOLVED IN: translational termination; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352); Has 2349 Blast hits to 2349 proteins in 1057 species: Archae - 0; Bacteria - 1715; Metazoa - 148; Fungi - 110; Plants - 54; Viruses - 0; Other Eukaryotes - 322 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative , Description = F23N19.20, PFAM = )' T '29.2.5' 'protein.synthesis.release' 'niben101scf00439_1081575-1087779' '(at1g62850 : 249.0) Class I peptide chain release factor; FUNCTIONS IN: translation release factor activity; INVOLVED IN: translational termination; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352); Has 2349 Blast hits to 2349 proteins in 1057 species: Archae - 0; Bacteria - 1715; Metazoa - 148; Fungi - 110; Plants - 54; Viruses - 0; Other Eukaryotes - 322 (source: NCBI BLink). & (gnl|cdd|38639 : 154.0) no description available & (gnl|cdd|82887 : 100.0) no description available & (reliability: 498.0) & (original description: Putative v1g83901, Description = Predicted protein, PFAM = PF00472)' T '29.2.5' 'protein.synthesis.release' 'niben101scf00912_528259-531569' '(at3g26618 : 768.0) eukaryotic release factor 1-3 (ERF1-3); FUNCTIONS IN: translation release factor activity; INVOLVED IN: translational termination; LOCATED IN: cytoplasm; EXPRESSED IN: male gametophyte, leaf, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: eRF1 domain 2 (InterPro:IPR005141), eRF1 domain 3 (InterPro:IPR005142), eRF1 domain 1 (InterPro:IPR005140), Peptide chain release factor eRF1/aRF1 (InterPro:IPR004403); BEST Arabidopsis thaliana protein match is: eukaryotic release factor 1-2 (TAIR:AT1G12920.1); Has 1175 Blast hits to 1170 proteins in 381 species: Archae - 342; Bacteria - 2; Metazoa - 243; Fungi - 154; Plants - 143; Viruses - 3; Other Eukaryotes - 288 (source: NCBI BLink). & (gnl|cdd|35907 : 696.0) no description available & (gnl|cdd|31692 : 430.0) no description available & (reliability: 1536.0) & (original description: Putative eRF1, Description = Eukaryotic peptide chain release factor subunit 1, PFAM = PF03465;PF03464;PF03463)' T '29.2.5' 'protein.synthesis.release' 'niben101scf01834_426787-430097' '(at3g26618 : 773.0) eukaryotic release factor 1-3 (ERF1-3); FUNCTIONS IN: translation release factor activity; INVOLVED IN: translational termination; LOCATED IN: cytoplasm; EXPRESSED IN: male gametophyte, leaf, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: eRF1 domain 2 (InterPro:IPR005141), eRF1 domain 3 (InterPro:IPR005142), eRF1 domain 1 (InterPro:IPR005140), Peptide chain release factor eRF1/aRF1 (InterPro:IPR004403); BEST Arabidopsis thaliana protein match is: eukaryotic release factor 1-2 (TAIR:AT1G12920.1); Has 1175 Blast hits to 1170 proteins in 381 species: Archae - 342; Bacteria - 2; Metazoa - 243; Fungi - 154; Plants - 143; Viruses - 3; Other Eukaryotes - 288 (source: NCBI BLink). & (gnl|cdd|35907 : 693.0) no description available & (gnl|cdd|31692 : 424.0) no description available & (reliability: 1546.0) & (original description: Putative eRF1, Description = Eukaryotic peptide chain release factor subunit 1, PFAM = PF03463;PF03464;PF03465)' T '29.2.5' 'protein.synthesis.release' 'niben101scf02569_203393-209381' '(at1g62850 : 241.0) Class I peptide chain release factor; FUNCTIONS IN: translation release factor activity; INVOLVED IN: translational termination; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352); Has 2349 Blast hits to 2349 proteins in 1057 species: Archae - 0; Bacteria - 1715; Metazoa - 148; Fungi - 110; Plants - 54; Viruses - 0; Other Eukaryotes - 322 (source: NCBI BLink). & (gnl|cdd|38639 : 153.0) no description available & (gnl|cdd|82887 : 99.8) no description available & (reliability: 482.0) & (original description: Putative v1g83901, Description = Predicted protein, PFAM = PF00472)' T '29.2.5' 'protein.synthesis.release' 'niben101scf03362_297793-301088' '(at2g47020 : 504.0) Peptide chain release factor 1; FUNCTIONS IN: translation release factor activity, codon specific, translation release factor activity; INVOLVED IN: translational termination; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352), Peptide chain release factor (InterPro:IPR005139); BEST Arabidopsis thaliana protein match is: Peptide chain release factor 1 (TAIR:AT3G62910.1); Has 16260 Blast hits to 16258 proteins in 2815 species: Archae - 0; Bacteria - 10372; Metazoa - 189; Fungi - 181; Plants - 204; Viruses - 13; Other Eukaryotes - 5301 (source: NCBI BLink). & (gnl|cdd|80711 : 456.0) no description available & (gnl|cdd|37937 : 331.0) no description available & (reliability: 1008.0) & (original description: Putative prfA, Description = Peptide chain release factor 1, PFAM = PF00472;PF03462)' T '29.2.5' 'protein.synthesis.release' 'niben101scf03374_656000-667376' '(at1g62850 : 110.0) Class I peptide chain release factor; FUNCTIONS IN: translation release factor activity; INVOLVED IN: translational termination; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352); Has 2349 Blast hits to 2349 proteins in 1057 species: Archae - 0; Bacteria - 1715; Metazoa - 148; Fungi - 110; Plants - 54; Viruses - 0; Other Eukaryotes - 322 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative , Description = F23N19.20, PFAM = )' T '29.2.5' 'protein.synthesis.release' 'niben101scf04487_698833-719039' '(at5g36170 : 435.0) Required for normal processing of polycistronic plastidial transcripts; high chlorophyll fluorescent 109 (HCF109); FUNCTIONS IN: translation release factor activity, codon specific, translation release factor activity; INVOLVED IN: translational termination, plastid organization, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352), Peptide chain release factor 2 (InterPro:IPR004374), Peptide chain release factor (InterPro:IPR005139); BEST Arabidopsis thaliana protein match is: Peptide chain release factor 2 (TAIR:AT1G56350.1); Has 16243 Blast hits to 16243 proteins in 2786 species: Archae - 5; Bacteria - 10390; Metazoa - 230; Fungi - 206; Plants - 192; Viruses - 0; Other Eukaryotes - 5220 (source: NCBI BLink). & (gnl|cdd|80710 : 351.0) no description available & (gnl|cdd|37937 : 278.0) no description available & (reliability: 870.0) & (original description: Putative prfB, Description = Peptide chain release factor 2, PFAM = PF03462;PF00472)' T '29.2.5' 'protein.synthesis.release' 'niben101scf05109_336567-339877' '(at3g26618 : 758.0) eukaryotic release factor 1-3 (ERF1-3); FUNCTIONS IN: translation release factor activity; INVOLVED IN: translational termination; LOCATED IN: cytoplasm; EXPRESSED IN: male gametophyte, leaf, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: eRF1 domain 2 (InterPro:IPR005141), eRF1 domain 3 (InterPro:IPR005142), eRF1 domain 1 (InterPro:IPR005140), Peptide chain release factor eRF1/aRF1 (InterPro:IPR004403); BEST Arabidopsis thaliana protein match is: eukaryotic release factor 1-2 (TAIR:AT1G12920.1); Has 1175 Blast hits to 1170 proteins in 381 species: Archae - 342; Bacteria - 2; Metazoa - 243; Fungi - 154; Plants - 143; Viruses - 3; Other Eukaryotes - 288 (source: NCBI BLink). & (gnl|cdd|35907 : 700.0) no description available & (gnl|cdd|31692 : 418.0) no description available & (reliability: 1516.0) & (original description: Putative eRF1, Description = Eukaryotic peptide chain release factor subunit 1, PFAM = PF03464;PF03465;PF03463)' T '29.2.5' 'protein.synthesis.release' 'niben101scf08264_75529-89846' '(at3g62910 : 567.0) Isolated in a screen for chloroplast development mutants. Pale green, albino seedlings arrest early in seedling development.; ALBINO AND PALE GREEN (APG3); FUNCTIONS IN: translation release factor activity, codon specific, translation release factor activity; INVOLVED IN: translational termination, chloroplast organization; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptide chain release factor 1 (InterPro:IPR004373), Class I peptide chain release factor (InterPro:IPR000352), Peptide chain release factor (InterPro:IPR005139); BEST Arabidopsis thaliana protein match is: Peptide chain release factor 1 (TAIR:AT2G47020.1); Has 17224 Blast hits to 17222 proteins in 2820 species: Archae - 0; Bacteria - 10525; Metazoa - 262; Fungi - 197; Plants - 224; Viruses - 13; Other Eukaryotes - 6003 (source: NCBI BLink). & (gnl|cdd|80711 : 496.0) no description available & (gnl|cdd|37937 : 355.0) no description available & (reliability: 1134.0) & (original description: Putative APG3, Description = Peptide chain release factor APG3, chloroplastic, PFAM = PF00472;PF03462)' T '29.2.5' 'protein.synthesis.release' 'niben101scf08621_311380-317572' '(at1g33330 : 222.0) Class I peptide chain release factor; FUNCTIONS IN: translation release factor activity; INVOLVED IN: translational termination; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352); BEST Arabidopsis thaliana protein match is: Peptide chain release factor 2 (TAIR:AT1G56350.1); Has 14711 Blast hits to 14711 proteins in 2768 species: Archae - 0; Bacteria - 10081; Metazoa - 256; Fungi - 228; Plants - 204; Viruses - 13; Other Eukaryotes - 3929 (source: NCBI BLink). & (gnl|cdd|37937 : 104.0) no description available & (gnl|cdd|80711 : 80.9) no description available & (reliability: 444.0) & (original description: Putative prfA, Description = Peptide chain release factor 2, PFAM = PF00472)' T '29.2.5' 'protein.synthesis.release' 'niben101scf10834_71219-85897' '(at5g36170 : 563.0) Required for normal processing of polycistronic plastidial transcripts; high chlorophyll fluorescent 109 (HCF109); FUNCTIONS IN: translation release factor activity, codon specific, translation release factor activity; INVOLVED IN: translational termination, plastid organization, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352), Peptide chain release factor 2 (InterPro:IPR004374), Peptide chain release factor (InterPro:IPR005139); BEST Arabidopsis thaliana protein match is: Peptide chain release factor 2 (TAIR:AT1G56350.1); Has 16243 Blast hits to 16243 proteins in 2786 species: Archae - 5; Bacteria - 10390; Metazoa - 230; Fungi - 206; Plants - 192; Viruses - 0; Other Eukaryotes - 5220 (source: NCBI BLink). & (gnl|cdd|80710 : 442.0) no description available & (gnl|cdd|37937 : 344.0) no description available & (reliability: 1126.0) & (original description: Putative rf2, Description = Putative translation releasing factor 2, PFAM = PF00472;PF03462)' T '29.2.5' 'protein.synthesis.release' 'niben101scf11480_465840-473266' '(at1g56350 : 632.0) Peptide chain release factor 2; FUNCTIONS IN: translation release factor activity, codon specific, translation release factor activity; INVOLVED IN: translational termination; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352), Peptide chain release factor 2 (InterPro:IPR004374), Peptide chain release factor (InterPro:IPR005139); BEST Arabidopsis thaliana protein match is: high chlorophyll fluorescent 109 (TAIR:AT5G36170.2); Has 16865 Blast hits to 16865 proteins in 2794 species: Archae - 0; Bacteria - 10325; Metazoa - 292; Fungi - 236; Plants - 212; Viruses - 15; Other Eukaryotes - 5785 (source: NCBI BLink). & (gnl|cdd|80710 : 433.0) no description available & (gnl|cdd|37937 : 320.0) no description available & (reliability: 1264.0) & (original description: Putative PRFB2, Description = Peptide chain release factor PrfB2, chloroplastic, PFAM = PF03462;PF00472)' T '29.2.6' 'protein.synthesis.ribosomal RNA' 'niben101scf00739_454078-457118' '(at2g37990 : 140.0) ribosome biogenesis regulatory protein (RRS1) family protein; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal biogenesis regulatory protein (InterPro:IPR007023); Has 425 Blast hits to 423 proteins in 207 species: Archae - 1; Bacteria - 2; Metazoa - 151; Fungi - 137; Plants - 58; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative At2g37990, Description = Ribosome biogenesis regulatory protein-like protein, PFAM = )' T '29.2.6' 'protein.synthesis.ribosomal RNA' 'niben101scf01240_422783-428831' '(at2g37990 : 291.0) ribosome biogenesis regulatory protein (RRS1) family protein; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal biogenesis regulatory protein (InterPro:IPR007023); Has 425 Blast hits to 423 proteins in 207 species: Archae - 1; Bacteria - 2; Metazoa - 151; Fungi - 137; Plants - 58; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|68510 : 165.0) no description available & (gnl|cdd|36976 : 162.0) no description available & (reliability: 582.0) & (original description: Putative rrs1, Description = Ribosome biogenesis regulatory protein-like protein, PFAM = PF04939)' T '29.2.7' 'protein.synthesis.transfer RNA' '' '' '29.2.7.1' 'protein.synthesis.transfer RNA.nucleus' '' '' '29.2.7.1.1' 'protein.synthesis.transfer RNA.nucleus.tRNA-Ala' '' '' '29.2.7.1.2' 'protein.synthesis.transfer RNA.nucleus.tRNA-Arg' '' '' '29.2.7.1.3' 'protein.synthesis.transfer RNA.nucleus.tRNA-Asn' '' '' '29.2.7.1.4' 'protein.synthesis.transfer RNA.nucleus.tRNA-Asp' '' '' '29.2.7.1.5' 'protein.synthesis.transfer RNA.nucleus.tRNA-Cys' '' '' '29.2.7.1.6' 'protein.synthesis.transfer RNA.nucleus.tRNA-Glu' '' '' '29.2.7.1.7' 'protein.synthesis.transfer RNA.nucleus.tRNA-Gln' '' '' '29.2.7.1.8' 'protein.synthesis.transfer RNA.nucleus.tRNA-Gly' '' '' '29.2.7.1.9' 'protein.synthesis.transfer RNA.nucleus.tRNA-His' '' '' '29.2.7.1.10' 'protein.synthesis.transfer RNA.nucleus.tRNA-Ile' '' '' '29.2.7.1.11' 'protein.synthesis.transfer RNA.nucleus.tRNA-Leu' '' '' '29.2.7.1.12' 'protein.synthesis.transfer RNA.nucleus.tRNA-Lys' '' '' '29.2.7.1.13' 'protein.synthesis.transfer RNA.nucleus.tRNA-Met' '' '' '29.2.7.1.14' 'protein.synthesis.transfer RNA.nucleus.tRNA-Phe' '' '' '29.2.7.1.15' 'protein.synthesis.transfer RNA.nucleus.tRNA-Pro' '' '' '29.2.7.1.16' 'protein.synthesis.transfer RNA.nucleus.tRNA-Ser' '' '' '29.2.7.1.17' 'protein.synthesis.transfer RNA.nucleus.tRNA-Thr' '' '' '29.2.7.1.18' 'protein.synthesis.transfer RNA.nucleus.tRNA-Trp' '' '' '29.2.7.1.19' 'protein.synthesis.transfer RNA.nucleus.tRNA-Tyr' '' '' '29.2.7.1.20' 'protein.synthesis.transfer RNA.nucleus.tRNA-Val' '' '' '29.2.7.2' 'protein.synthesis.transfer RNA.plastid' '' '' '29.2.7.2.1' 'protein.synthesis.transfer RNA.plastid.tRNA-Ala' '' '' '29.2.7.2.2' 'protein.synthesis.transfer RNA.plastid.tRNA-Arg' '' '' '29.2.7.2.3' 'protein.synthesis.transfer RNA.plastid.tRNA-Asn' '' '' '29.2.7.2.4' 'protein.synthesis.transfer RNA.plastid.tRNA-Asp' '' '' '29.2.7.2.5' 'protein.synthesis.transfer RNA.plastid.tRNA-Cys' '' '' '29.2.7.2.6' 'protein.synthesis.transfer RNA.plastid.tRNA-Glu' '' '' '29.2.7.2.7' 'protein.synthesis.transfer RNA.plastid.tRNA-Gln' '' '' '29.2.7.2.8' 'protein.synthesis.transfer RNA.plastid.tRNA-Gly' '' '' '29.2.7.2.9' 'protein.synthesis.transfer RNA.plastid.tRNA-His' '' '' '29.2.7.2.10' 'protein.synthesis.transfer RNA.plastid.tRNA-Ile' '' '' '29.2.7.2.11' 'protein.synthesis.transfer RNA.plastid.tRNA-Leu' '' '' '29.2.7.2.12' 'protein.synthesis.transfer RNA.plastid.tRNA-Lys' '' '' '29.2.7.2.13' 'protein.synthesis.transfer RNA.plastid.tRNA-Met' '' '' '29.2.7.2.14' 'protein.synthesis.transfer RNA.plastid.tRNA-Phe' '' '' '29.2.7.2.15' 'protein.synthesis.transfer RNA.plastid.tRNA-Pro' '' '' '29.2.7.2.16' 'protein.synthesis.transfer RNA.plastid.tRNA-Ser' '' '' '29.2.7.2.17' 'protein.synthesis.transfer RNA.plastid.tRNA-Thr' '' '' '29.2.7.2.18' 'protein.synthesis.transfer RNA.plastid.tRNA-Trp' '' '' '29.2.7.2.19' 'protein.synthesis.transfer RNA.plastid.tRNA-Tyr' '' '' '29.2.7.2.20' 'protein.synthesis.transfer RNA.plastid.tRNA-Val' '' '' '29.2.7.3' 'protein.synthesis.transfer RNA.mitochondrion' '' '' '29.2.7.3.3' 'protein.synthesis.transfer RNA.mitochondrion.tRNA-Asn' '' '' '29.2.7.3.4' 'protein.synthesis.transfer RNA.mitochondrion.tRNA-Asp' '' '' '29.2.7.3.5' 'protein.synthesis.transfer RNA.mitochondrion.tRNA-Cys' '' '' '29.2.7.3.6' 'protein.synthesis.transfer RNA.mitochondrion.tRNA-Glu' '' '' '29.2.7.3.7' 'protein.synthesis.transfer RNA.mitochondrion.tRNA-Gln' '' '' '29.2.7.3.8' 'protein.synthesis.transfer RNA.mitochondrion.tRNA-Gly' '' '' '29.2.7.3.10' 'protein.synthesis.transfer RNA.mitochondrion.tRNA-Ile' '' '' '29.2.7.3.12' 'protein.synthesis.transfer RNA.mitochondrion.tRNA-Lys' '' '' '29.2.7.3.13' 'protein.synthesis.transfer RNA.mitochondrion.tRNA-Met' '' '' '29.2.7.3.15' 'protein.synthesis.transfer RNA.mitochondrion.tRNA-Pro' '' '' '29.2.7.3.16' 'protein.synthesis.transfer RNA.mitochondrion.tRNA-Ser' '' '' '29.2.7.3.18' 'protein.synthesis.transfer RNA.mitochondrion.tRNA-Trp' '' '' '29.2.7.3.19' 'protein.synthesis.transfer RNA.mitochondrion.tRNA-Tyr' '' '' '29.2.99' 'protein.synthesis.misc' 'nbv0.3scaffold2999_72827-76102' '(at2g39260 : 208.0) binding;RNA binding; FUNCTIONS IN: RNA binding, binding; INVOLVED IN: translation, RNA metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), Up-frameshift suppressor 2 (InterPro:IPR007193), MIF4-like, type 1/2/3 (InterPro:IPR016021); Has 8683 Blast hits to 5464 proteins in 545 species: Archae - 34; Bacteria - 610; Metazoa - 3010; Fungi - 1047; Plants - 271; Viruses - 134; Other Eukaryotes - 3577 (source: NCBI BLink). & (gnl|cdd|37262 : 142.0) no description available & (gnl|cdd|67658 : 96.8) no description available & (reliability: 416.0) & (original description: Putative Sb06g022920, Description = Putative uncharacterized protein Sb06g022920, PFAM = PF04050)' T '29.2.99' 'protein.synthesis.misc' 'nbv0.3scaffold57290_539-11115' '(at1g76810 : 1013.0) eukaryotic translation initiation factor 2 (eIF-2) family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 (eIF-2) family protein (TAIR:AT1G76720.1); Has 208612 Blast hits to 135501 proteins in 4311 species: Archae - 1435; Bacteria - 54544; Metazoa - 70572; Fungi - 21896; Plants - 9806; Viruses - 724; Other Eukaryotes - 49635 (source: NCBI BLink). & (gnl|cdd|36359 : 1007.0) no description available & (gnl|cdd|81253 : 527.0) no description available & (p57997|if2c_phavu : 94.0) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1880.0) & (original description: Putative IF2P, Description = Eukaryotic translation initiation factor, PFAM = PF11987;PF00009;PF03144)' T '29.2.99' 'protein.synthesis.misc' 'nbv0.5scaffold324_12006-30417' '(at5g17930 : 659.0) MIF4G domain-containing protein / MA3 domain-containing protein; FUNCTIONS IN: binding; INVOLVED IN: RNA metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT1G80930.1); Has 15897 Blast hits to 11268 proteins in 674 species: Archae - 101; Bacteria - 729; Metazoa - 6896; Fungi - 1567; Plants - 651; Viruses - 76; Other Eukaryotes - 5877 (source: NCBI BLink). & (gnl|cdd|37352 : 419.0) no description available & (reliability: 1318.0) & (original description: Putative At5g17930, Description = Putative nucleolar MIF4G domain-containing protein 1-like, PFAM = PF02854;PF02847)' T '29.2.99' 'protein.synthesis.misc' 'niben044scf00014278ctg006_185-11307' '(at4g27650 : 595.0) Encodes Arabidopsis homolog of Drosophila pelota protein.; PELOTA (PEL1); FUNCTIONS IN: translation release factor activity; INVOLVED IN: meiosis, translational termination, translation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: eRF1 domain 2 (InterPro:IPR005141), eRF1 domain 3 (InterPro:IPR005142), eRF1 domain 1 (InterPro:IPR005140), Probable translation factor pelota (InterPro:IPR004405); BEST Arabidopsis thaliana protein match is: Eukaryotic release factor 1 (eRF1) family protein (TAIR:AT3G58390.1); Has 776 Blast hits to 774 proteins in 323 species: Archae - 255; Bacteria - 0; Metazoa - 140; Fungi - 159; Plants - 51; Viruses - 1; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|38080 : 527.0) no description available & (gnl|cdd|31726 : 260.0) no description available & (reliability: 1190.0) & (original description: Putative PEL1, Description = Protein PELOTA 1, PFAM = PF03463;PF03464;PF03465)' T '29.2.99' 'protein.synthesis.misc' 'niben044scf00038445ctg002_1-9070' '(at2g39260 : 689.0) binding;RNA binding; FUNCTIONS IN: RNA binding, binding; INVOLVED IN: translation, RNA metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), Up-frameshift suppressor 2 (InterPro:IPR007193), MIF4-like, type 1/2/3 (InterPro:IPR016021); Has 8683 Blast hits to 5464 proteins in 545 species: Archae - 34; Bacteria - 610; Metazoa - 3010; Fungi - 1047; Plants - 271; Viruses - 134; Other Eukaryotes - 3577 (source: NCBI BLink). & (gnl|cdd|37262 : 540.0) no description available & (gnl|cdd|86149 : 122.0) no description available & (reliability: 1378.0) & (original description: Putative upf2, Description = Regulator of nonsense transcripts 2, PFAM = PF02854;PF02854)' T '29.2.99' 'protein.synthesis.misc' 'niben101scf00181_69467-80727' '(at1g76810 : 1009.0) eukaryotic translation initiation factor 2 (eIF-2) family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 (eIF-2) family protein (TAIR:AT1G76720.1); Has 208612 Blast hits to 135501 proteins in 4311 species: Archae - 1435; Bacteria - 54544; Metazoa - 70572; Fungi - 21896; Plants - 9806; Viruses - 724; Other Eukaryotes - 49635 (source: NCBI BLink). & (gnl|cdd|36359 : 1007.0) no description available & (gnl|cdd|81253 : 526.0) no description available & (p57997|if2c_phavu : 93.6) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1866.0) & (original description: Putative EIF5B, Description = Translation initiation factor eIF-5B, PFAM = PF03144;PF00009;PF11987)' T '29.2.99' 'protein.synthesis.misc' 'niben101scf00863_265696-276665' '(gnl|cdd|36359 : 1006.0) no description available & (at1g76810 : 1002.0) eukaryotic translation initiation factor 2 (eIF-2) family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 (eIF-2) family protein (TAIR:AT1G76720.1); Has 208612 Blast hits to 135501 proteins in 4311 species: Archae - 1435; Bacteria - 54544; Metazoa - 70572; Fungi - 21896; Plants - 9806; Viruses - 724; Other Eukaryotes - 49635 (source: NCBI BLink). & (gnl|cdd|81253 : 526.0) no description available & (p57997|if2c_phavu : 94.0) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1876.0) & (original description: Putative EIF5B, Description = Translation initiation factor eIF-5B, PFAM = PF03144;PF11987;PF00009)' T '29.2.99' 'protein.synthesis.misc' 'niben101scf01035_679974-703955' '(at2g39260 : 1425.0) binding;RNA binding; FUNCTIONS IN: RNA binding, binding; INVOLVED IN: translation, RNA metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), Up-frameshift suppressor 2 (InterPro:IPR007193), MIF4-like, type 1/2/3 (InterPro:IPR016021); Has 8683 Blast hits to 5464 proteins in 545 species: Archae - 34; Bacteria - 610; Metazoa - 3010; Fungi - 1047; Plants - 271; Viruses - 134; Other Eukaryotes - 3577 (source: NCBI BLink). & (gnl|cdd|37262 : 921.0) no description available & (gnl|cdd|86149 : 136.0) no description available & (reliability: 2850.0) & (original description: Putative UPF2, Description = Regulator of nonsense transcripts UPF2, PFAM = PF04050;PF02854;PF02854;PF02854)' T '29.2.99' 'protein.synthesis.misc' 'niben101scf03377_417589-429633' '(at4g27650 : 593.0) Encodes Arabidopsis homolog of Drosophila pelota protein.; PELOTA (PEL1); FUNCTIONS IN: translation release factor activity; INVOLVED IN: meiosis, translational termination, translation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: eRF1 domain 2 (InterPro:IPR005141), eRF1 domain 3 (InterPro:IPR005142), eRF1 domain 1 (InterPro:IPR005140), Probable translation factor pelota (InterPro:IPR004405); BEST Arabidopsis thaliana protein match is: Eukaryotic release factor 1 (eRF1) family protein (TAIR:AT3G58390.1); Has 776 Blast hits to 774 proteins in 323 species: Archae - 255; Bacteria - 0; Metazoa - 140; Fungi - 159; Plants - 51; Viruses - 1; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|38080 : 529.0) no description available & (gnl|cdd|31726 : 257.0) no description available & (reliability: 1186.0) & (original description: Putative PEL1, Description = Protein PELOTA 1, PFAM = PF03465;PF03464;PF03463)' T '29.2.99' 'protein.synthesis.misc' 'niben101scf05841_203095-227775' '(at5g17930 : 657.0) MIF4G domain-containing protein / MA3 domain-containing protein; FUNCTIONS IN: binding; INVOLVED IN: RNA metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT1G80930.1); Has 15897 Blast hits to 11268 proteins in 674 species: Archae - 101; Bacteria - 729; Metazoa - 6896; Fungi - 1567; Plants - 651; Viruses - 76; Other Eukaryotes - 5877 (source: NCBI BLink). & (gnl|cdd|37352 : 420.0) no description available & (reliability: 1314.0) & (original description: Putative At5g17930, Description = Putative nucleolar MIF4G domain-containing protein 1-like, PFAM = PF02847;PF02854)' T '29.3' 'protein.targeting' 'nbv0.3scaffold45694_1-14860' '(at5g27395 : 332.0) Mitochondrial inner membrane translocase complex, subunit Tim44-related protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport; LOCATED IN: mitochondrion, mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim44-related (InterPro:IPR007379); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80064 : 119.0) no description available & (gnl|cdd|39799 : 89.0) no description available & (reliability: 664.0) & (original description: Putative Sb02g041340, Description = Putative uncharacterized protein Sb02g041340, PFAM = PF04280)' T '29.3' 'protein.targeting' 'niben044scf00011498ctg001_17798-26266' '(q7xab8|thf1_soltu : 385.0) Protein THYLAKOID FORMATION1, chloroplast precursor - Solanum tuberosum (Potato) & (at2g20890 : 333.0) Chloroplast-localized Thylakoid formation1 gene product involved in vesicle-mediated formation of thylakoid membranes. Thf1 antisense lines contain abnormal chloroplasts early in leaf development (chloroplasts have loosely stacked thylakoid membranes). Expression was induced in the light and decreased under dark conditions. G-alpha interaction partner that functions downstream of the plasma membraneñdelimited heterotrimeric G-protein (GPA1) in a D-glucose signaling pathway. Localized to both the outer plastid membrane and the stroma. Probably involved in the metabolic pathway that controls the assembly of the PS II complex.; photosystem II reaction center PSB29 protein (PSB29); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: in 9 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II biogenesis protein Psp29 (InterPro:IPR017499); Has 330 Blast hits to 330 proteins in 95 species: Archae - 0; Bacteria - 141; Metazoa - 1; Fungi - 0; Plants - 61; Viruses - 6; Other Eukaryotes - 121 (source: NCBI BLink). & (reliability: 666.0) & (original description: Putative THF1, Description = Protein THYLAKOID FORMATION1, chloroplastic, PFAM = PF11264)' T '29.3' 'protein.targeting' 'niben101scf00963_206720-222258' '(at5g27395 : 291.0) Mitochondrial inner membrane translocase complex, subunit Tim44-related protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport; LOCATED IN: mitochondrion, mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim44-related (InterPro:IPR007379); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80064 : 94.2) no description available & (reliability: 582.0) & (original description: Putative Sb02g041340, Description = Putative uncharacterized protein Sb02g041340, PFAM = PF04280)' T '29.3' 'protein.targeting' 'niben101scf04015_172588-182850' '(at5g27395 : 337.0) Mitochondrial inner membrane translocase complex, subunit Tim44-related protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport; LOCATED IN: mitochondrion, mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim44-related (InterPro:IPR007379); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80064 : 119.0) no description available & (gnl|cdd|39799 : 89.4) no description available & (reliability: 674.0) & (original description: Putative Sb02g041340, Description = Putative uncharacterized protein Sb02g041340, PFAM = PF04280)' T '29.3' 'protein.targeting' 'niben101scf06654_261768-270992' '(q7xab8|thf1_soltu : 406.0) Protein THYLAKOID FORMATION1, chloroplast precursor - Solanum tuberosum (Potato) & (at2g20890 : 327.0) Chloroplast-localized Thylakoid formation1 gene product involved in vesicle-mediated formation of thylakoid membranes. Thf1 antisense lines contain abnormal chloroplasts early in leaf development (chloroplasts have loosely stacked thylakoid membranes). Expression was induced in the light and decreased under dark conditions. G-alpha interaction partner that functions downstream of the plasma membraneñdelimited heterotrimeric G-protein (GPA1) in a D-glucose signaling pathway. Localized to both the outer plastid membrane and the stroma. Probably involved in the metabolic pathway that controls the assembly of the PS II complex.; photosystem II reaction center PSB29 protein (PSB29); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: in 9 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II biogenesis protein Psp29 (InterPro:IPR017499); Has 330 Blast hits to 330 proteins in 95 species: Archae - 0; Bacteria - 141; Metazoa - 1; Fungi - 0; Plants - 61; Viruses - 6; Other Eukaryotes - 121 (source: NCBI BLink). & (reliability: 654.0) & (original description: Putative THF1, Description = Protein THYLAKOID FORMATION1, chloroplastic, PFAM = PF11264)' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold1764_77748-84624' '(at1g71480 : 236.0) Nuclear transport factor 2 (NTF2) family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: transport, protein import into nucleus; LOCATED IN: chloroplast thylakoid membrane, intracellular, nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT5G41470.1); Has 98 Blast hits to 98 proteins in 29 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative BnaC06g32580D, Description = BnaC06g32580D protein, PFAM = PF12680)' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold16336_18413-30296' '(at3g17340 : 899.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.2). & (gnl|cdd|37202 : 134.0) no description available & (gnl|cdd|35215 : 84.6) no description available & (reliability: 1798.0) & (original description: Putative BnaC05g36080D, Description = BnaC05g36080D protein, PFAM = PF03810)' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold16862_7068-19640' '(at5g03070 : 678.0) Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.; importin alpha isoform 9 (IMPA-9); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 6 (TAIR:AT1G02690.2); Has 2139 Blast hits to 1862 proteins in 255 species: Archae - 0; Bacteria - 2; Metazoa - 1001; Fungi - 275; Plants - 485; Viruses - 0; Other Eukaryotes - 376 (source: NCBI BLink). & (q9fyp9|ima2_orysa : 588.0) Importin alpha-2 subunit - Oryza sativa (Rice) & (gnl|cdd|35388 : 318.0) no description available & (gnl|cdd|34668 : 218.0) no description available & (reliability: 1356.0) & (original description: Putative IMPA9, Description = Importin subunit alpha-9, PFAM = PF00514;PF00514)' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold18583_3093-12394' '(at1g12930 : 146.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G62600.1); Has 493 Blast hits to 488 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 137; Plants - 74; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative At1g12930, Description = Exportin 1-like protein domain-containing protein, PFAM = )' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold21718_14277-20134' '(at1g27970 : 206.0) Encodes an ortholog of yeast NTF2, a nuclear envelop transport protein that functions as the nuclear import receptor for RanGDP, an essential player in nucleocytoplasmic transport.; nuclear transport factor 2B (NTF2B); FUNCTIONS IN: protein transporter activity, Ran GTPase binding; INVOLVED IN: nucleocytoplasmic transport, protein import into nucleus; LOCATED IN: nuclear envelope, intracellular, nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222); BEST Arabidopsis thaliana protein match is: nuclear transport factor 2A (TAIR:AT1G27310.1); Has 947 Blast hits to 947 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 435; Fungi - 217; Plants - 201; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|37315 : 163.0) no description available & (q9xj54|ntf2_orysa : 162.0) Nuclear transport factor 2 (NTF-2) - Oryza sativa (Rice) & (gnl|cdd|29630 : 128.0) no description available & (reliability: 412.0) & (original description: Putative NTF2, Description = Nuclear transport factor 2, PFAM = PF02136)' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold30914_1-9215' '(at1g26170 : 776.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37485 : 456.0) no description available & (reliability: 1552.0) & (original description: Putative At1g26170, Description = Importin beta-2 subunit family protein, PFAM = )' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold36231_772-7377' '(gnl|cdd|35339 : 300.0) no description available & (at3g25150 : 278.0) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT5G60980.2). & (gnl|cdd|29630 : 130.0) no description available & (reliability: 556.0) & (original description: Putative pco105214b, Description = Putative G3BP-like protein, PFAM = PF02136;PF00076)' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold37289_17905-38787' '(at5g17020 : 1746.0) Encodes a member of the exportin protein family (XPO1A) which functions as receptors for nuclear export. Binds to a variety of proteins having leucine rich export signals.Along with XPO1B involved with development of the male and female gametophytes.; exportin 1A (XPO1A); CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Exportin 1, C-terminal (InterPro:IPR014877), Armadillo-like helical (InterPro:IPR011989), Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: exportin 1B (TAIR:AT3G03110.1). & (gnl|cdd|37231 : 1035.0) no description available & (gnl|cdd|34704 : 922.0) no description available & (reliability: 3492.0) & (original description: Putative Xpo1, Description = Exportin-1, PFAM = PF08389;PF03810;PF08767)' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold40751_5789-23231' '(at1g12930 : 360.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G62600.1); Has 493 Blast hits to 488 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 137; Plants - 74; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 720.0) & (original description: Putative At1g12930, Description = Exportin 1-like protein domain-containing protein, PFAM = )' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold40942_1-9978' '(at1g12930 : 171.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G62600.1); Has 493 Blast hits to 488 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 137; Plants - 74; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative At1g12930, Description = Exportin 1-like protein domain-containing protein, PFAM = )' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold49876_598-11904' '(at4g27640 : 1479.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G19820.1); Has 2274 Blast hits to 2138 proteins in 232 species: Archae - 0; Bacteria - 13; Metazoa - 858; Fungi - 732; Plants - 312; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink). & (gnl|cdd|37382 : 780.0) no description available & (gnl|cdd|34812 : 108.0) no description available & (reliability: 2958.0) & (original description: Putative Sb01g040400, Description = Putative uncharacterized protein Sb01g040400, PFAM = PF03810;PF02985)' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold51289_8190-13436' '(at3g06720 : 732.0) Encodes importin alpha involved in nuclear import.; AT-IMP; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: cytosol, nuclear envelope, nucleolus, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 2 (TAIR:AT4G16143.2); Has 4059 Blast hits to 2974 proteins in 281 species: Archae - 4; Bacteria - 22; Metazoa - 1537; Fungi - 665; Plants - 1109; Viruses - 0; Other Eukaryotes - 722 (source: NCBI BLink). & (q9slx0|ima1b_orysa : 732.0) Importin alpha-1b subunit - Oryza sativa (Rice) & (gnl|cdd|35388 : 633.0) no description available & (gnl|cdd|34668 : 536.0) no description available & (reliability: 1464.0) & (original description: Putative kapA, Description = Importin subunit alpha, PFAM = PF00514;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514;PF16186)' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold62774_2489-11142' '(at1g09270 : 822.0) Protein interacts with Agrobacterium proteins VirD2 and VirE2.; importin alpha isoform 4 (IMPA-4); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, symbiont intracellular protein transport in host, host response to induction by symbiont of tumor, nodule or growth in host; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 1 (TAIR:AT3G06720.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q71vm4|ima1a_orysa : 750.0) Importin alpha-1a subunit - Oryza sativa (Rice) & (gnl|cdd|35388 : 681.0) no description available & (gnl|cdd|34668 : 575.0) no description available & (reliability: 1644.0) & (original description: Putative IMPA4, Description = Importin subunit alpha-4, PFAM = PF01749;PF16186;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514)' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold67098_6481-10008' '(gnl|cdd|35339 : 200.0) no description available & (at3g25150 : 149.0) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT5G60980.2). & (gnl|cdd|29630 : 124.0) no description available & (reliability: 298.0) & (original description: Putative LOC100382927, Description = Nuclear transport factor 2, PFAM = PF02136;PF00076)' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.3scaffold107324_830-5566' '(at3g08943 : 586.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G08947.1); Has 1770 Blast hits to 1697 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 669; Fungi - 578; Plants - 273; Viruses - 0; Other Eukaryotes - 250 (source: NCBI BLink). & (gnl|cdd|36455 : 415.0) no description available & (gnl|cdd|34812 : 231.0) no description available & (reliability: 1172.0) & (original description: Putative BnaC05g33770D, Description = BnaC05g33770D protein, PFAM = PF03810)' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold90_567906-576045' '(at1g10390 : 246.0) Nucleoporin autopeptidase; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, nuclear pore; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S59, nucleoporin (InterPro:IPR007230); BEST Arabidopsis thaliana protein match is: Nucleoporin autopeptidase (TAIR:AT1G59660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86541 : 173.0) no description available & (reliability: 492.0) & (original description: Putative NbNup98b, Description = Nuclear pore complex protein Nup98b, PFAM = PF04096)' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold119_736157-750617' '(at2g31660 : 1499.0) SAD2 (super sensitive to ABA and drought 2) encodes an importin beta-domain family protein likely to be involved in nuclear transport in ABA signaling. Subcellular localization of GFP-tagged SAD2 showed a predominantly nuclear localization, consistent with a role for SAD2 in nuclear transport. Mutation of SAD2 in Arabidopsis alters abscisic acid sensitivity. SAD2 was ubiquitously expressed at low levels in all tissues except flowers. SAD2 expression was not induced by ABA or stress. Loss of function mutations in SAD2 exhibit increased tolerance for UV stress, increased production of UV protective secondary metabolites and suppression of nuclear localization of MYB4 (a repressor of UV stress response genes).; SUPER SENSITIVE TO ABA AND DROUGHT2 (SAD2); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: protein import into nucleus, docking, protein import into nucleus; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Exportin/Importin, Cse1-like (InterPro:IPR013713); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.1); Has 3689 Blast hits to 2792 proteins in 293 species: Archae - 3; Bacteria - 183; Metazoa - 1271; Fungi - 834; Plants - 368; Viruses - 60; Other Eukaryotes - 970 (source: NCBI BLink). & (gnl|cdd|37202 : 1130.0) no description available & (gnl|cdd|35215 : 386.0) no description available & (reliability: 2998.0) & (original description: Putative SAD2, Description = Importin beta-like SAD2, PFAM = PF03810;PF08506)' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold277_364249-490540' '(at3g17340 : 240.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.2). & (reliability: 480.0) & (original description: Putative At3g17340, Description = ARM repeat superfamily protein, PFAM = )' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold415_704245-770389' '(at1g12930 : 858.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G62600.1); Has 493 Blast hits to 488 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 137; Plants - 74; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 1716.0) & (original description: Putative Sb05g020810, Description = Putative uncharacterized protein Sb05g020810, PFAM = )' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold415_726519-747738' '(at1g12930 : 325.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G62600.1); Has 493 Blast hits to 488 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 137; Plants - 74; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 650.0) & (original description: Putative At1g12930, Description = Exportin 1-like protein domain-containing protein, PFAM = )' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold637_397824-416108' '(at5g20200 : 100.0) nucleoporin-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G10650.1); Has 1474 Blast hits to 595 proteins in 170 species: Archae - 0; Bacteria - 165; Metazoa - 255; Fungi - 183; Plants - 74; Viruses - 0; Other Eukaryotes - 797 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative)' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold695_201042-219940' '(at5g05680 : 479.0) Encodes MOS7 (Modifier of snc1,7), homologous to human and Drosophila melanogaster nucleoporin Nup88. Resides at the nuclear envelope. Modulates the nuclear concentrations of certain defense proteins regulates defense outputs.; MODIFIER OF SNC1,7 (MOS7); CONTAINS InterPro DOMAIN/s: Nuclear pore complex, nucleoporin 88 (InterPro:IPR019321); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39661 : 265.0) no description available & (reliability: 958.0) & (original description: Putative MOS7, Description = Nuclear pore complex family protein, PFAM = PF10168)' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold766_23829-30603' '(gnl|cdd|35339 : 295.0) no description available & (at3g25150 : 229.0) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT5G60980.2). & (gnl|cdd|29630 : 131.0) no description available & (reliability: 458.0) & (original description: Putative pco105214b, Description = Putative G3BP-like protein, PFAM = PF00076;PF02136)' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold794_538067-544598' '(gnl|cdd|35339 : 291.0) no description available & (at3g25150 : 282.0) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT5G60980.2). & (gnl|cdd|29630 : 130.0) no description available & (reliability: 564.0) & (original description: Putative pco105214b, Description = Putative G3BP-like protein, PFAM = PF00076;PF02136)' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold873_441882-446138' '(gnl|cdd|35339 : 208.0) no description available & (at3g25150 : 152.0) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT5G60980.2). & (gnl|cdd|29630 : 124.0) no description available & (reliability: 304.0) & (original description: Putative LOC100382927, Description = Os02g0497700 protein, PFAM = PF02136;PF00076)' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold1549_274926-294309' '(at5g17020 : 1855.0) Encodes a member of the exportin protein family (XPO1A) which functions as receptors for nuclear export. Binds to a variety of proteins having leucine rich export signals.Along with XPO1B involved with development of the male and female gametophytes.; exportin 1A (XPO1A); CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Exportin 1, C-terminal (InterPro:IPR014877), Armadillo-like helical (InterPro:IPR011989), Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: exportin 1B (TAIR:AT3G03110.1). & (gnl|cdd|37231 : 1072.0) no description available & (gnl|cdd|34704 : 957.0) no description available & (reliability: 3710.0) & (original description: Putative XPO1, Description = Protein EXPORTIN 1A, PFAM = PF08767;PF03810;PF08389)' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold1579_216240-220568' '(gnl|cdd|71335 : 109.0) no description available & (at3g07250 : 106.0) nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: flower, leaf; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Protein of unknown function DUF1675 (InterPro:IPR012463); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT5G48650.1); Has 5020 Blast hits to 2878 proteins in 309 species: Archae - 0; Bacteria - 77; Metazoa - 2136; Fungi - 614; Plants - 1253; Viruses - 84; Other Eukaryotes - 856 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative AFP, Description = Ninja-family protein AFP1, PFAM = PF16135;PF07897)' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold1611_284646-292131' '(at1g80680 : 1157.0) Mutant has early-flowering phenotype, encodes a putative nucleoporin. Required for the activation of downstream defense pathways by the snc1 mutation. Involved in basal resistance against bacterial pathogens.; SUPPRESSOR OF AUXIN RESISTANCE 3 (SAR3); FUNCTIONS IN: porin activity; INVOLVED IN: mRNA export from nucleus, defense response signaling pathway, resistance gene-dependent, response to auxin stimulus, negative regulation of flower development, developmental process; LOCATED IN: nuclear membrane, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S59, nucleoporin (InterPro:IPR007230), Nuclear protein 96 (InterPro:IPR021967); BEST Arabidopsis thaliana protein match is: Nucleoporin autopeptidase (TAIR:AT1G10390.2); Has 653 Blast hits to 526 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 269; Fungi - 224; Plants - 93; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36063 : 166.0) no description available & (gnl|cdd|86541 : 162.0) no description available & (reliability: 2314.0) & (original description: Putative NUP96, Description = Nuclear pore complex protein NUP96, PFAM = PF12110;PF04096)' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold2737_126348-132007' '(at1g68910 : 217.0) Encodes one of the WPP domain-interacting proteins (WIT1/AT5G11390, WIT2/AT1G68910) required for RanGAP nuclear envelope association in root tip cells. Ran GTPase plays essential roles in multiple cellular processes, including nucleocytoplasmic transport, spindle formation, and postmitotic nuclear envelope reassembly. The cytoplasmic Ran GTPase activating protein RanGAP is critical to establish a functional RanGTP/RanGDP gradient across the nuclear envelope and is associated with the outer surface of the nuclear envelope in metazoan and higher plant cells. Arabidopsis thaliana RanGAP association with the root tip nuclear envelope requires a family of likely plant-specific nucleoporins combining coiled-coil and transmembrane domains (CC-TMD) and WPP domain-interacting proteins (WIPs). WIT1 and WIT2 have been identified as a second family of CC-TMD proteins, structurally similar, yet clearly distinct from the WIP family, that is required for RanGAP nuclear envelop association in root tip cells.; WPP domain-interacting protein 2 (WIT2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: WPP domain-interacting protein 1 (TAIR:AT5G11390.1). & (reliability: 434.0) & (original description: Putative PGSC0003DMG400026559, Description = WPP domain-interacting tail-anchored protein 1, PFAM = )' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold3537_225661-234339' '(at4g37130 : 356.0) hydroxyproline-rich glycoprotein family protein; Has 29299 Blast hits to 11722 proteins in 694 species: Archae - 13; Bacteria - 1010; Metazoa - 7996; Fungi - 3634; Plants - 2592; Viruses - 347; Other Eukaryotes - 13707 (source: NCBI BLink). & (reliability: 712.0) & (original description: Putative NUP58, Description = Nuclear pore complex protein NUP58, PFAM = PF15967)' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold4006_177490-182209' '(at5g53480 : 1432.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, chloroplast, nuclear pore, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G08947.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36455 : 1031.0) no description available & (gnl|cdd|34812 : 535.0) no description available & (reliability: 2864.0) & (original description: Putative KPNB1, Description = Importin subunit beta-1, PFAM = PF13513;PF03810)' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold4059_103799-127919' '(at5g43960 : 280.0) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT3G25150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35339 : 236.0) no description available & (q08935|roc1_nicsy : 137.0) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|29630 : 109.0) no description available & (reliability: 560.0) & (original description: Putative glysoja_002492, Description = Putative G3BP-like protein, PFAM = PF00076;PF00076;PF00076;PF02136)' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold4106_73284-93581' '(at2g16950 : 811.0) Nuclear import receptor for AtGRP7.; transportin 1 (TRN1); CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G16960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37234 : 750.0) no description available & (reliability: 1622.0) & (original description: Putative tnpo, Description = Transportin-1, PFAM = PF02985;PF13513)' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold5780_123606-130775' '(at1g27970 : 181.0) Encodes an ortholog of yeast NTF2, a nuclear envelop transport protein that functions as the nuclear import receptor for RanGDP, an essential player in nucleocytoplasmic transport.; nuclear transport factor 2B (NTF2B); FUNCTIONS IN: protein transporter activity, Ran GTPase binding; INVOLVED IN: nucleocytoplasmic transport, protein import into nucleus; LOCATED IN: nuclear envelope, intracellular, nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222); BEST Arabidopsis thaliana protein match is: nuclear transport factor 2A (TAIR:AT1G27310.1); Has 947 Blast hits to 947 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 435; Fungi - 217; Plants - 201; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|37315 : 153.0) no description available & (q9xj54|ntf2_orysa : 135.0) Nuclear transport factor 2 (NTF-2) - Oryza sativa (Rice) & (gnl|cdd|29630 : 116.0) no description available & (reliability: 362.0) & (original description: Putative ntf2, Description = Nuclear transport factor 2, PFAM = PF02136)' T '29.3.1' 'protein.targeting.nucleus' 'nbv0.5scaffold7314_7062-24859' '(at1g12930 : 145.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G62600.1); Has 493 Blast hits to 488 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 137; Plants - 74; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative At1g12930, Description = Exportin 1-like protein domain-containing protein, PFAM = PF08389)' T '29.3.1' 'protein.targeting.nucleus' 'niben044scf00002147ctg039_9069-12926' '(at2g31660 : 223.0) SAD2 (super sensitive to ABA and drought 2) encodes an importin beta-domain family protein likely to be involved in nuclear transport in ABA signaling. Subcellular localization of GFP-tagged SAD2 showed a predominantly nuclear localization, consistent with a role for SAD2 in nuclear transport. Mutation of SAD2 in Arabidopsis alters abscisic acid sensitivity. SAD2 was ubiquitously expressed at low levels in all tissues except flowers. SAD2 expression was not induced by ABA or stress. Loss of function mutations in SAD2 exhibit increased tolerance for UV stress, increased production of UV protective secondary metabolites and suppression of nuclear localization of MYB4 (a repressor of UV stress response genes).; SUPER SENSITIVE TO ABA AND DROUGHT2 (SAD2); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: protein import into nucleus, docking, protein import into nucleus; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Exportin/Importin, Cse1-like (InterPro:IPR013713); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.1); Has 3689 Blast hits to 2792 proteins in 293 species: Archae - 3; Bacteria - 183; Metazoa - 1271; Fungi - 834; Plants - 368; Viruses - 60; Other Eukaryotes - 970 (source: NCBI BLink). & (gnl|cdd|37202 : 179.0) no description available & (gnl|cdd|35216 : 80.4) no description available & (reliability: 446.0) & (original description: Putative EMA1, Description = Putative importin-7-like protein, PFAM = PF03810)' T '29.3.1' 'protein.targeting.nucleus' 'niben044scf00002147ctg041_1-6853' '(at2g31660 : 914.0) SAD2 (super sensitive to ABA and drought 2) encodes an importin beta-domain family protein likely to be involved in nuclear transport in ABA signaling. Subcellular localization of GFP-tagged SAD2 showed a predominantly nuclear localization, consistent with a role for SAD2 in nuclear transport. Mutation of SAD2 in Arabidopsis alters abscisic acid sensitivity. SAD2 was ubiquitously expressed at low levels in all tissues except flowers. SAD2 expression was not induced by ABA or stress. Loss of function mutations in SAD2 exhibit increased tolerance for UV stress, increased production of UV protective secondary metabolites and suppression of nuclear localization of MYB4 (a repressor of UV stress response genes).; SUPER SENSITIVE TO ABA AND DROUGHT2 (SAD2); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: protein import into nucleus, docking, protein import into nucleus; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Exportin/Importin, Cse1-like (InterPro:IPR013713); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.1); Has 3689 Blast hits to 2792 proteins in 293 species: Archae - 3; Bacteria - 183; Metazoa - 1271; Fungi - 834; Plants - 368; Viruses - 60; Other Eukaryotes - 970 (source: NCBI BLink). & (gnl|cdd|37202 : 687.0) no description available & (gnl|cdd|35215 : 251.0) no description available & (reliability: 1828.0) & (original description: Putative EMA1, Description = Putative importin-7-like protein, PFAM = PF08506)' T '29.3.1' 'protein.targeting.nucleus' 'niben044scf00003811ctg000_1-2908' '(at1g27970 : 160.0) Encodes an ortholog of yeast NTF2, a nuclear envelop transport protein that functions as the nuclear import receptor for RanGDP, an essential player in nucleocytoplasmic transport.; nuclear transport factor 2B (NTF2B); FUNCTIONS IN: protein transporter activity, Ran GTPase binding; INVOLVED IN: nucleocytoplasmic transport, protein import into nucleus; LOCATED IN: nuclear envelope, intracellular, nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222); BEST Arabidopsis thaliana protein match is: nuclear transport factor 2A (TAIR:AT1G27310.1); Has 947 Blast hits to 947 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 435; Fungi - 217; Plants - 201; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|37315 : 136.0) no description available & (q9xj54|ntf2_orysa : 130.0) Nuclear transport factor 2 (NTF-2) - Oryza sativa (Rice) & (gnl|cdd|29630 : 108.0) no description available & (reliability: 320.0) & (original description: Putative NTF2, Description = Nuclear transport factor 2, PFAM = PF02136)' T '29.3.1' 'protein.targeting.nucleus' 'niben044scf00004667ctg009_1068-6494' '(at5g17020 : 441.0) Encodes a member of the exportin protein family (XPO1A) which functions as receptors for nuclear export. Binds to a variety of proteins having leucine rich export signals.Along with XPO1B involved with development of the male and female gametophytes.; exportin 1A (XPO1A); CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Exportin 1, C-terminal (InterPro:IPR014877), Armadillo-like helical (InterPro:IPR011989), Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: exportin 1B (TAIR:AT3G03110.1). & (gnl|cdd|37231 : 259.0) no description available & (gnl|cdd|34704 : 222.0) no description available & (reliability: 882.0) & (original description: Putative Xpo1, Description = Exportin-1, PFAM = PF08389;PF03810)' T '29.3.1' 'protein.targeting.nucleus' 'niben044scf00005661ctg000_739-5446' '(at3g08947 : 1219.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G08943.1); Has 1718 Blast hits to 1652 proteins in 220 species: Archae - 0; Bacteria - 1; Metazoa - 645; Fungi - 556; Plants - 267; Viruses - 0; Other Eukaryotes - 249 (source: NCBI BLink). & (gnl|cdd|36455 : 861.0) no description available & (gnl|cdd|34812 : 537.0) no description available & (reliability: 2438.0) & (original description: Putative IMB1, Description = Importin subunit beta-1, PFAM = PF03810;PF13513)' T '29.3.1' 'protein.targeting.nucleus' 'niben044scf00006157ctg004_2636-20775' '(at1g12930 : 302.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G62600.1); Has 493 Blast hits to 488 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 137; Plants - 74; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 604.0) & (original description: Putative At1g12930, Description = Exportin 1-like protein domain-containing protein, PFAM = )' T '29.3.1' 'protein.targeting.nucleus' 'niben044scf00012555ctg002_14138-18778' '(at5g20200 : 82.4) nucleoporin-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G10650.1); Has 1474 Blast hits to 595 proteins in 170 species: Archae - 0; Bacteria - 165; Metazoa - 255; Fungi - 183; Plants - 74; Viruses - 0; Other Eukaryotes - 797 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative)' T '29.3.1' 'protein.targeting.nucleus' 'niben044scf00012886ctg004_1210-9098' '(gnl|cdd|35339 : 310.0) no description available & (at3g25150 : 264.0) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT5G60980.2). & (gnl|cdd|29630 : 136.0) no description available & (reliability: 528.0) & (original description: Putative At3g25150, Description = Nuclear transport factor 2 and RNA recognition motif domain-containing protein, PFAM = PF02136;PF00076)' T '29.3.1' 'protein.targeting.nucleus' 'niben044scf00020436ctg003_1648-4631' '(at3g17340 : 238.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.2). & (reliability: 476.0) & (original description: Putative At3g17340, Description = ARM repeat superfamily protein, PFAM = )' T '29.3.1' 'protein.targeting.nucleus' 'niben044scf00021963ctg008_1-3941' '(at3g08947 : 1238.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G08943.1); Has 1718 Blast hits to 1652 proteins in 220 species: Archae - 0; Bacteria - 1; Metazoa - 645; Fungi - 556; Plants - 267; Viruses - 0; Other Eukaryotes - 249 (source: NCBI BLink). & (gnl|cdd|36455 : 881.0) no description available & (gnl|cdd|34812 : 551.0) no description available & (reliability: 2476.0) & (original description: Putative At3g08947, Description = Armadillo/beta-catenin-like repeat-containing protein, PFAM = PF03810;PF13513)' T '29.3.1' 'protein.targeting.nucleus' 'niben044scf00023242ctg002_1-8530' '(at5g05680 : 323.0) Encodes MOS7 (Modifier of snc1,7), homologous to human and Drosophila melanogaster nucleoporin Nup88. Resides at the nuclear envelope. Modulates the nuclear concentrations of certain defense proteins regulates defense outputs.; MODIFIER OF SNC1,7 (MOS7); CONTAINS InterPro DOMAIN/s: Nuclear pore complex, nucleoporin 88 (InterPro:IPR019321); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39661 : 180.0) no description available & (reliability: 646.0) & (original description: Putative MOS7, Description = Nuclear pore complex family protein, PFAM = PF10168)' T '29.3.1' 'protein.targeting.nucleus' 'niben044scf00023242ctg005_230-10793' '(at5g05680 : 500.0) Encodes MOS7 (Modifier of snc1,7), homologous to human and Drosophila melanogaster nucleoporin Nup88. Resides at the nuclear envelope. Modulates the nuclear concentrations of certain defense proteins regulates defense outputs.; MODIFIER OF SNC1,7 (MOS7); CONTAINS InterPro DOMAIN/s: Nuclear pore complex, nucleoporin 88 (InterPro:IPR019321); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39661 : 283.0) no description available & (reliability: 1000.0) & (original description: Putative MOS7, Description = Nuclear pore complex family protein, PFAM = PF10168)' T '29.3.1' 'protein.targeting.nucleus' 'niben044scf00026709ctg006_12500-19492' '(at5g17020 : 617.0) Encodes a member of the exportin protein family (XPO1A) which functions as receptors for nuclear export. Binds to a variety of proteins having leucine rich export signals.Along with XPO1B involved with development of the male and female gametophytes.; exportin 1A (XPO1A); CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Exportin 1, C-terminal (InterPro:IPR014877), Armadillo-like helical (InterPro:IPR011989), Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: exportin 1B (TAIR:AT3G03110.1). & (gnl|cdd|37231 : 330.0) no description available & (gnl|cdd|34704 : 303.0) no description available & (reliability: 1234.0) & (original description: Putative caf2, Description = Exportin-1, PFAM = PF08389;PF03810)' T '29.3.1' 'protein.targeting.nucleus' 'niben044scf00028776ctg007_3005-11624' '(at4g37130 : 357.0) hydroxyproline-rich glycoprotein family protein; Has 29299 Blast hits to 11722 proteins in 694 species: Archae - 13; Bacteria - 1010; Metazoa - 7996; Fungi - 3634; Plants - 2592; Viruses - 347; Other Eukaryotes - 13707 (source: NCBI BLink). & (reliability: 714.0) & (original description: Putative NUP58, Description = Nuclear pore complex protein NUP58, PFAM = PF15967)' T '29.3.1' 'protein.targeting.nucleus' 'niben044scf00029450ctg004_719-12349' '(at4g27640 : 1497.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G19820.1); Has 2274 Blast hits to 2138 proteins in 232 species: Archae - 0; Bacteria - 13; Metazoa - 858; Fungi - 732; Plants - 312; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink). & (gnl|cdd|37382 : 786.0) no description available & (gnl|cdd|34812 : 108.0) no description available & (reliability: 2994.0) & (original description: Putative Sb01g040400, Description = Putative uncharacterized protein Sb01g040400, PFAM = PF02985;PF03810)' T '29.3.1' 'protein.targeting.nucleus' 'niben044scf00030328ctg006_1-3343' '(at2g16950 : 311.0) Nuclear import receptor for AtGRP7.; transportin 1 (TRN1); CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G16960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37234 : 306.0) no description available & (reliability: 622.0) & (original description: Putative tnpo, Description = Transportin-1, PFAM = PF13513)' T '29.3.1' 'protein.targeting.nucleus' 'niben044scf00030328ctg008_979-9735' '(at2g16950 : 566.0) Nuclear import receptor for AtGRP7.; transportin 1 (TRN1); CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G16960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37234 : 484.0) no description available & (reliability: 1132.0) & (original description: Putative TNPO1, Description = Transportin-1, PFAM = PF03810)' T '29.3.1' 'protein.targeting.nucleus' 'niben044scf00041069ctg002_31554-41842' '(at5g40480 : 2006.0) embryo defective 3012 (EMB3012); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Invasin/intimin cell-adhesion (InterPro:IPR008964), Bacterial Ig-like, group 2 (InterPro:IPR003343); Has 264 Blast hits to 238 proteins in 89 species: Archae - 0; Bacteria - 31; Metazoa - 150; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|37044 : 272.0) no description available & (reliability: 4012.0) & (original description: Putative GB210, Description = Nuclear pore complex protein GP210, PFAM = PF02368;PF02368)' T '29.3.1' 'protein.targeting.nucleus' 'niben101ctg11114_1-1208' '(at1g11570 : 165.0) NTF2-like (NTL); FUNCTIONS IN: protein transporter activity; INVOLVED IN: transport, protein import into nucleus; LOCATED IN: nucleus, intracellular; EXPRESSED IN: leaf whorl, sperm cell, flower, pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222); BEST Arabidopsis thaliana protein match is: nuclear transport factor 2B (TAIR:AT1G27970.1); Has 1082 Blast hits to 1082 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 586; Fungi - 199; Plants - 205; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (gnl|cdd|37315 : 150.0) no description available & (q9xj54|ntf2_orysa : 135.0) Nuclear transport factor 2 (NTF-2) - Oryza sativa (Rice) & (gnl|cdd|29630 : 117.0) no description available & (reliability: 330.0) & (original description: Putative NTL, Description = Nuclear transport factor 2-like protein, PFAM = PF02136)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf00044_87093-97110' '(at4g37130 : 323.0) hydroxyproline-rich glycoprotein family protein; Has 29299 Blast hits to 11722 proteins in 694 species: Archae - 13; Bacteria - 1010; Metazoa - 7996; Fungi - 3634; Plants - 2592; Viruses - 347; Other Eukaryotes - 13707 (source: NCBI BLink). & (reliability: 646.0) & (original description: Putative NUP58, Description = Nuclear pore complex protein NUP58, PFAM = PF15967)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf00109_1082666-1085123' '(at1g27310 : 171.0) Encodes an ortholog of yeast NTF2, a nuclear envelop transport protein that functions as the nuclear import receptor for RanGDP, an essential player in nucleocytoplasmic transport.; nuclear transport factor 2A (NTF2A); CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222); BEST Arabidopsis thaliana protein match is: nuclear transport factor 2B (TAIR:AT1G27970.1); Has 977 Blast hits to 977 proteins in 228 species: Archae - 0; Bacteria - 0; Metazoa - 416; Fungi - 243; Plants - 223; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (q9xj54|ntf2_orysa : 139.0) Nuclear transport factor 2 (NTF-2) - Oryza sativa (Rice) & (gnl|cdd|37315 : 134.0) no description available & (gnl|cdd|29630 : 109.0) no description available & (reliability: 342.0) & (original description: Putative ntf2, Description = Nuclear transport factor 2, PFAM = PF02136)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf00113_466214-474194' '(gnl|cdd|35339 : 309.0) no description available & (at3g25150 : 267.0) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT5G60980.2). & (gnl|cdd|29630 : 134.0) no description available & (reliability: 534.0) & (original description: Putative At3g25150, Description = Nuclear transport factor 2 and RNA recognition motif domain-containing protein, PFAM = PF02136;PF00076)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf00270_1000584-1016512' '(at2g31660 : 1474.0) SAD2 (super sensitive to ABA and drought 2) encodes an importin beta-domain family protein likely to be involved in nuclear transport in ABA signaling. Subcellular localization of GFP-tagged SAD2 showed a predominantly nuclear localization, consistent with a role for SAD2 in nuclear transport. Mutation of SAD2 in Arabidopsis alters abscisic acid sensitivity. SAD2 was ubiquitously expressed at low levels in all tissues except flowers. SAD2 expression was not induced by ABA or stress. Loss of function mutations in SAD2 exhibit increased tolerance for UV stress, increased production of UV protective secondary metabolites and suppression of nuclear localization of MYB4 (a repressor of UV stress response genes).; SUPER SENSITIVE TO ABA AND DROUGHT2 (SAD2); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: protein import into nucleus, docking, protein import into nucleus; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Exportin/Importin, Cse1-like (InterPro:IPR013713); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.1); Has 3689 Blast hits to 2792 proteins in 293 species: Archae - 3; Bacteria - 183; Metazoa - 1271; Fungi - 834; Plants - 368; Viruses - 60; Other Eukaryotes - 970 (source: NCBI BLink). & (gnl|cdd|37202 : 1105.0) no description available & (gnl|cdd|35215 : 378.0) no description available & (reliability: 2948.0) & (original description: Putative EMA1, Description = Putative importin-7-like protein, PFAM = PF03810;PF03810;PF08506)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf00465_706296-741029' '(at1g26170 : 1317.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37485 : 794.0) no description available & (gnl|cdd|35216 : 93.9) no description available & (reliability: 2634.0) & (original description: Putative At1g26170, Description = Importin-beta N-terminal domain-containing protein, PFAM = PF03810)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf00597_832457-841002' '(gnl|cdd|35339 : 238.0) no description available & (at5g43960 : 233.0) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT3G25150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29630 : 115.0) no description available & (reliability: 466.0) & (original description: Putative At5g43960, Description = Gb}, PFAM = PF02136;PF00076)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf00866_1983-8451' '(at2g46520 : 1230.0) cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter, putative; FUNCTIONS IN: protein transporter activity, importin-alpha export receptor activity, binding; INVOLVED IN: intracellular protein transport, cell proliferation, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), CAS/CSE, C-terminal (InterPro:IPR005043), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Exportin/Importin, Cse1-like (InterPro:IPR013713); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.2); Has 1154 Blast hits to 1141 proteins in 210 species: Archae - 0; Bacteria - 0; Metazoa - 461; Fungi - 384; Plants - 163; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink). & (gnl|cdd|37203 : 1004.0) no description available & (gnl|cdd|71934 : 443.0) no description available & (reliability: 2460.0) & (original description: Putative CAS, Description = Exportin-2, PFAM = PF03378;PF03810;PF08506)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf01063_733922-757072' '(at5g17020 : 1859.0) Encodes a member of the exportin protein family (XPO1A) which functions as receptors for nuclear export. Binds to a variety of proteins having leucine rich export signals.Along with XPO1B involved with development of the male and female gametophytes.; exportin 1A (XPO1A); CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Exportin 1, C-terminal (InterPro:IPR014877), Armadillo-like helical (InterPro:IPR011989), Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: exportin 1B (TAIR:AT3G03110.1). & (gnl|cdd|37231 : 1077.0) no description available & (gnl|cdd|34704 : 959.0) no description available & (reliability: 3718.0) & (original description: Putative XPO1, Description = Protein EXPORTIN 1A, PFAM = PF08389;PF08767;PF03810)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf01266_12169-125277' '(at1g12930 : 1065.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G62600.1); Has 493 Blast hits to 488 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 137; Plants - 74; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|37292 : 152.0) no description available & (reliability: 2130.0) & (original description: Putative At1g12930, Description = Exportin 1-like protein domain-containing protein, PFAM = PF08389)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf01376_257533-272402' '(at2g31660 : 1562.0) SAD2 (super sensitive to ABA and drought 2) encodes an importin beta-domain family protein likely to be involved in nuclear transport in ABA signaling. Subcellular localization of GFP-tagged SAD2 showed a predominantly nuclear localization, consistent with a role for SAD2 in nuclear transport. Mutation of SAD2 in Arabidopsis alters abscisic acid sensitivity. SAD2 was ubiquitously expressed at low levels in all tissues except flowers. SAD2 expression was not induced by ABA or stress. Loss of function mutations in SAD2 exhibit increased tolerance for UV stress, increased production of UV protective secondary metabolites and suppression of nuclear localization of MYB4 (a repressor of UV stress response genes).; SUPER SENSITIVE TO ABA AND DROUGHT2 (SAD2); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: protein import into nucleus, docking, protein import into nucleus; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Exportin/Importin, Cse1-like (InterPro:IPR013713); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.1); Has 3689 Blast hits to 2792 proteins in 293 species: Archae - 3; Bacteria - 183; Metazoa - 1271; Fungi - 834; Plants - 368; Viruses - 60; Other Eukaryotes - 970 (source: NCBI BLink). & (gnl|cdd|37202 : 1163.0) no description available & (gnl|cdd|35215 : 400.0) no description available & (reliability: 3124.0) & (original description: Putative SAD2, Description = Importin beta-like SAD2, PFAM = PF03810;PF08506)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf01435_155121-162788' '(at4g24880 : 522.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38342 : 322.0) no description available & (reliability: 1044.0) & (original description: Putative rnut1, Description = Snurportin-1, PFAM = )' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf01768_197469-230374' '(at2g16950 : 1267.0) Nuclear import receptor for AtGRP7.; transportin 1 (TRN1); CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G16960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37234 : 1109.0) no description available & (gnl|cdd|34812 : 96.3) no description available & (reliability: 2534.0) & (original description: Putative TRN1, Description = Transportin-1, PFAM = PF13513;PF03810;PF02985)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf01830_170834-179256' '(at4g24880 : 519.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38342 : 319.0) no description available & (reliability: 1038.0) & (original description: Putative rnut1, Description = Snurportin-1, PFAM = )' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf01964_1014154-1027492' '(at1g09270 : 827.0) Protein interacts with Agrobacterium proteins VirD2 and VirE2.; importin alpha isoform 4 (IMPA-4); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, symbiont intracellular protein transport in host, host response to induction by symbiont of tumor, nodule or growth in host; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 1 (TAIR:AT3G06720.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q71vm4|ima1a_orysa : 753.0) Importin alpha-1a subunit - Oryza sativa (Rice) & (gnl|cdd|35388 : 681.0) no description available & (gnl|cdd|34668 : 573.0) no description available & (reliability: 1654.0) & (original description: Putative IMPA4, Description = Importin subunit alpha-4, PFAM = PF00514;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514;PF01749;PF16186)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf02122_126262-147430' '(at4g27640 : 1494.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G19820.1); Has 2274 Blast hits to 2138 proteins in 232 species: Archae - 0; Bacteria - 13; Metazoa - 858; Fungi - 732; Plants - 312; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink). & (gnl|cdd|37382 : 791.0) no description available & (gnl|cdd|34812 : 113.0) no description available & (reliability: 2988.0) & (original description: Putative Sb01g040400, Description = Putative uncharacterized protein Sb01g040400, PFAM = PF03810;PF02985;PF02985)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf02714_623673-631812' '(at1g10390 : 246.0) Nucleoporin autopeptidase; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, nuclear pore; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S59, nucleoporin (InterPro:IPR007230); BEST Arabidopsis thaliana protein match is: Nucleoporin autopeptidase (TAIR:AT1G59660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86541 : 173.0) no description available & (reliability: 492.0) & (original description: Putative NbNup98b, Description = Nuclear pore complex protein Nup98b, PFAM = PF04096)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf02740_1202963-1212442' '(at1g27970 : 188.0) Encodes an ortholog of yeast NTF2, a nuclear envelop transport protein that functions as the nuclear import receptor for RanGDP, an essential player in nucleocytoplasmic transport.; nuclear transport factor 2B (NTF2B); FUNCTIONS IN: protein transporter activity, Ran GTPase binding; INVOLVED IN: nucleocytoplasmic transport, protein import into nucleus; LOCATED IN: nuclear envelope, intracellular, nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222); BEST Arabidopsis thaliana protein match is: nuclear transport factor 2A (TAIR:AT1G27310.1); Has 947 Blast hits to 947 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 435; Fungi - 217; Plants - 201; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|37315 : 154.0) no description available & (q9xj54|ntf2_orysa : 144.0) Nuclear transport factor 2 (NTF-2) - Oryza sativa (Rice) & (gnl|cdd|29630 : 118.0) no description available & (reliability: 376.0) & (original description: Putative NTF2, Description = Nuclear transport factor 2, PFAM = PF02136)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf02755_572617-577331' '(at5g53480 : 1477.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, chloroplast, nuclear pore, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G08947.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36455 : 1031.0) no description available & (gnl|cdd|34812 : 546.0) no description available & (reliability: 2954.0) & (original description: Putative IPB1, Description = Importin beta, PFAM = PF13513;PF03810)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf02838_464508-486576' '(at5g20200 : 137.0) nucleoporin-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G10650.1); Has 1474 Blast hits to 595 proteins in 170 species: Archae - 0; Bacteria - 165; Metazoa - 255; Fungi - 183; Plants - 74; Viruses - 0; Other Eukaryotes - 797 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf02908_291483-321649' '(at2g16950 : 1268.0) Nuclear import receptor for AtGRP7.; transportin 1 (TRN1); CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G16960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37234 : 1126.0) no description available & (gnl|cdd|34812 : 99.4) no description available & (reliability: 2536.0) & (original description: Putative TRN1, Description = Transportin-1, PFAM = PF03810;PF13513;PF02985)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf03049_534436-546597' '(at3g17340 : 898.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.2). & (gnl|cdd|37202 : 134.0) no description available & (gnl|cdd|35215 : 84.6) no description available & (reliability: 1796.0) & (original description: Putative BnaC05g36080D, Description = BnaC05g36080D protein, PFAM = PF03810)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf03049_534747-541898' '(at3g17340 : 241.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.2). & (reliability: 482.0) & (original description: Putative At3g17340, Description = ARM repeat superfamily protein, PFAM = )' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf03371_364182-374641' '(at1g12930 : 186.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G62600.1); Has 493 Blast hits to 488 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 137; Plants - 74; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative At1g12930, Description = Exportin 1-like protein domain-containing protein, PFAM = )' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf03390_834199-841248' '(at3g06720 : 872.0) Encodes importin alpha involved in nuclear import.; AT-IMP; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: cytosol, nuclear envelope, nucleolus, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 2 (TAIR:AT4G16143.2); Has 4059 Blast hits to 2974 proteins in 281 species: Archae - 4; Bacteria - 22; Metazoa - 1537; Fungi - 665; Plants - 1109; Viruses - 0; Other Eukaryotes - 722 (source: NCBI BLink). & (q9slx0|ima1b_orysa : 850.0) Importin alpha-1b subunit - Oryza sativa (Rice) & (gnl|cdd|35388 : 693.0) no description available & (gnl|cdd|34668 : 581.0) no description available & (reliability: 1744.0) & (original description: Putative kapA, Description = Importin subunit alpha, PFAM = PF01749;PF16186;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf03455_434745-444730' '(at5g40480 : 2025.0) embryo defective 3012 (EMB3012); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Invasin/intimin cell-adhesion (InterPro:IPR008964), Bacterial Ig-like, group 2 (InterPro:IPR003343); Has 264 Blast hits to 238 proteins in 89 species: Archae - 0; Bacteria - 31; Metazoa - 150; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|37044 : 240.0) no description available & (reliability: 4050.0) & (original description: Putative GB210, Description = Nuclear pore complex protein GP210, PFAM = PF02368;PF02368)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf03766_81666-87185' '(at1g27970 : 186.0) Encodes an ortholog of yeast NTF2, a nuclear envelop transport protein that functions as the nuclear import receptor for RanGDP, an essential player in nucleocytoplasmic transport.; nuclear transport factor 2B (NTF2B); FUNCTIONS IN: protein transporter activity, Ran GTPase binding; INVOLVED IN: nucleocytoplasmic transport, protein import into nucleus; LOCATED IN: nuclear envelope, intracellular, nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222); BEST Arabidopsis thaliana protein match is: nuclear transport factor 2A (TAIR:AT1G27310.1); Has 947 Blast hits to 947 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 435; Fungi - 217; Plants - 201; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|37315 : 157.0) no description available & (q9xj54|ntf2_orysa : 155.0) Nuclear transport factor 2 (NTF-2) - Oryza sativa (Rice) & (gnl|cdd|29630 : 124.0) no description available & (reliability: 372.0) & (original description: Putative Ntf2, Description = Nuclear transport factor 2, PFAM = PF02136)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf03878_383182-404797' '(at1g14850 : 1865.0) Encodes a protein similar to nucleoporin, a a major component of the nuclear pore complex (NPC) involved in cellular nucleo-cytoplasmic transport; nucleoporin 155 (NUP155); FUNCTIONS IN: nucleocytoplasmic transporter activity; INVOLVED IN: nucleocytoplasmic transport; LOCATED IN: nucleolus, plasma membrane, chloroplast, nuclear pore; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoporin, Nup133/Nup155-like, N-terminal (InterPro:IPR014908), Nucleoporin, Nup155-like (InterPro:IPR004870), Nucleoporin, Nup133/Nup155-like, C-terminal (InterPro:IPR007187); Has 459 Blast hits to 396 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 168; Plants - 85; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (gnl|cdd|37111 : 940.0) no description available & (gnl|cdd|66827 : 350.0) no description available & (reliability: 3730.0) & (original description: Putative Os06g0305200, Description = Os06g0305200 protein, PFAM = PF08801;PF03177)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf04083_397315-402191' '(at5g53480 : 1426.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, chloroplast, nuclear pore, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G08947.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36455 : 1028.0) no description available & (gnl|cdd|34812 : 535.0) no description available & (reliability: 2852.0) & (original description: Putative KPNB1, Description = Importin subunit beta-1, PFAM = PF13513;PF03810)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf04300_343179-353320' '(at3g06720 : 877.0) Encodes importin alpha involved in nuclear import.; AT-IMP; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: cytosol, nuclear envelope, nucleolus, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 2 (TAIR:AT4G16143.2); Has 4059 Blast hits to 2974 proteins in 281 species: Archae - 4; Bacteria - 22; Metazoa - 1537; Fungi - 665; Plants - 1109; Viruses - 0; Other Eukaryotes - 722 (source: NCBI BLink). & (q71vm4|ima1a_orysa : 853.0) Importin alpha-1a subunit - Oryza sativa (Rice) & (gnl|cdd|35388 : 695.0) no description available & (gnl|cdd|34668 : 565.0) no description available & (reliability: 1754.0) & (original description: Putative IMPA6, Description = Importin subunit alpha-6, PFAM = PF16186;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514;PF01749)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf04827_368429-377888' '(at1g09270 : 845.0) Protein interacts with Agrobacterium proteins VirD2 and VirE2.; importin alpha isoform 4 (IMPA-4); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, symbiont intracellular protein transport in host, host response to induction by symbiont of tumor, nodule or growth in host; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 1 (TAIR:AT3G06720.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q71vm4|ima1a_orysa : 763.0) Importin alpha-1a subunit - Oryza sativa (Rice) & (gnl|cdd|35388 : 683.0) no description available & (gnl|cdd|34668 : 578.0) no description available & (reliability: 1690.0) & (original description: Putative IMPA4, Description = Importin subunit alpha-4, PFAM = PF01749;PF16186;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf04953_1189996-1202318' '(at5g03070 : 670.0) Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.; importin alpha isoform 9 (IMPA-9); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 6 (TAIR:AT1G02690.2); Has 2139 Blast hits to 1862 proteins in 255 species: Archae - 0; Bacteria - 2; Metazoa - 1001; Fungi - 275; Plants - 485; Viruses - 0; Other Eukaryotes - 376 (source: NCBI BLink). & (q9fyp9|ima2_orysa : 573.0) Importin alpha-2 subunit - Oryza sativa (Rice) & (gnl|cdd|35388 : 321.0) no description available & (gnl|cdd|34668 : 224.0) no description available & (reliability: 1340.0) & (original description: Putative IMPA9, Description = Importin subunit alpha-9, PFAM = PF00514;PF00514)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf05103_118005-137944' '(at1g14850 : 1867.0) Encodes a protein similar to nucleoporin, a a major component of the nuclear pore complex (NPC) involved in cellular nucleo-cytoplasmic transport; nucleoporin 155 (NUP155); FUNCTIONS IN: nucleocytoplasmic transporter activity; INVOLVED IN: nucleocytoplasmic transport; LOCATED IN: nucleolus, plasma membrane, chloroplast, nuclear pore; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoporin, Nup133/Nup155-like, N-terminal (InterPro:IPR014908), Nucleoporin, Nup155-like (InterPro:IPR004870), Nucleoporin, Nup133/Nup155-like, C-terminal (InterPro:IPR007187); Has 459 Blast hits to 396 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 168; Plants - 85; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (gnl|cdd|37111 : 948.0) no description available & (gnl|cdd|66827 : 356.0) no description available & (reliability: 3734.0) & (original description: Putative NUP155, Description = Nuclear pore complex protein NUP155, PFAM = PF08801;PF03177)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf05368_462220-466927' '(at3g08947 : 1246.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G08943.1); Has 1718 Blast hits to 1652 proteins in 220 species: Archae - 0; Bacteria - 1; Metazoa - 645; Fungi - 556; Plants - 267; Viruses - 0; Other Eukaryotes - 249 (source: NCBI BLink). & (gnl|cdd|36455 : 885.0) no description available & (gnl|cdd|34812 : 553.0) no description available & (reliability: 2492.0) & (original description: Putative KPNB1, Description = Importin subunit beta-1, PFAM = PF13513;PF03810)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf05929_214374-273144' '(at5g43960 : 270.0) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT3G25150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35339 : 234.0) no description available & (q08935|roc1_nicsy : 152.0) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|29630 : 111.0) no description available & (reliability: 540.0) & (original description: Putative BnaC09g17770D, Description = BnaC09g17770D protein, PFAM = PF00076;PF00076;PF00076;PF02136)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf06318_1982-6806' '(at3g08947 : 1176.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G08943.1); Has 1718 Blast hits to 1652 proteins in 220 species: Archae - 0; Bacteria - 1; Metazoa - 645; Fungi - 556; Plants - 267; Viruses - 0; Other Eukaryotes - 249 (source: NCBI BLink). & (gnl|cdd|36455 : 863.0) no description available & (gnl|cdd|34812 : 538.0) no description available & (reliability: 2352.0) & (original description: Putative KPNB1, Description = Importin subunit beta-1, PFAM = PF13513;PF03810)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf06848_1047180-1064296' '(at1g71480 : 239.0) Nuclear transport factor 2 (NTF2) family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: transport, protein import into nucleus; LOCATED IN: chloroplast thylakoid membrane, intracellular, nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT5G41470.1); Has 98 Blast hits to 98 proteins in 29 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 478.0) & (original description: Putative BnaCnng07930D, Description = BnaCnng07930D protein, PFAM = PF12680)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf06926_268598-298053' '(at5g05680 : 874.0) Encodes MOS7 (Modifier of snc1,7), homologous to human and Drosophila melanogaster nucleoporin Nup88. Resides at the nuclear envelope. Modulates the nuclear concentrations of certain defense proteins regulates defense outputs.; MODIFIER OF SNC1,7 (MOS7); CONTAINS InterPro DOMAIN/s: Nuclear pore complex, nucleoporin 88 (InterPro:IPR019321); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39661 : 491.0) no description available & (reliability: 1748.0) & (original description: Putative NUP88, Description = Nuclear pore complex protein NUP88, PFAM = PF10168;PF10168)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf06926_268649-293104' '(at5g05680 : 732.0) Encodes MOS7 (Modifier of snc1,7), homologous to human and Drosophila melanogaster nucleoporin Nup88. Resides at the nuclear envelope. Modulates the nuclear concentrations of certain defense proteins regulates defense outputs.; MODIFIER OF SNC1,7 (MOS7); CONTAINS InterPro DOMAIN/s: Nuclear pore complex, nucleoporin 88 (InterPro:IPR019321); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39661 : 388.0) no description available & (reliability: 1464.0) & (original description: Putative MOS7, Description = Nuclear pore complex family protein, PFAM = PF10168)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf06956_156841-164122' '(gnl|cdd|35339 : 312.0) no description available & (at3g25150 : 265.0) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT5G60980.2). & (gnl|cdd|29630 : 129.0) no description available & (reliability: 530.0) & (original description: Putative Os02g0497700, Description = Os02g0497700 protein, PFAM = PF02136;PF00076)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf06976_28597-36953' '(at1g80680 : 1210.0) Mutant has early-flowering phenotype, encodes a putative nucleoporin. Required for the activation of downstream defense pathways by the snc1 mutation. Involved in basal resistance against bacterial pathogens.; SUPPRESSOR OF AUXIN RESISTANCE 3 (SAR3); FUNCTIONS IN: porin activity; INVOLVED IN: mRNA export from nucleus, defense response signaling pathway, resistance gene-dependent, response to auxin stimulus, negative regulation of flower development, developmental process; LOCATED IN: nuclear membrane, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S59, nucleoporin (InterPro:IPR007230), Nuclear protein 96 (InterPro:IPR021967); BEST Arabidopsis thaliana protein match is: Nucleoporin autopeptidase (TAIR:AT1G10390.2); Has 653 Blast hits to 526 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 269; Fungi - 224; Plants - 93; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36063 : 175.0) no description available & (gnl|cdd|86541 : 163.0) no description available & (reliability: 2420.0) & (original description: Putative NUP96, Description = Nuclear pore complex protein NUP96, PFAM = PF12110;PF04096)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf06996_329836-336290' '(at3g06720 : 842.0) Encodes importin alpha involved in nuclear import.; AT-IMP; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: cytosol, nuclear envelope, nucleolus, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 2 (TAIR:AT4G16143.2); Has 4059 Blast hits to 2974 proteins in 281 species: Archae - 4; Bacteria - 22; Metazoa - 1537; Fungi - 665; Plants - 1109; Viruses - 0; Other Eukaryotes - 722 (source: NCBI BLink). & (q71vm4|ima1a_orysa : 832.0) Importin alpha-1a subunit - Oryza sativa (Rice) & (gnl|cdd|35388 : 694.0) no description available & (gnl|cdd|34668 : 575.0) no description available & (reliability: 1684.0) & (original description: Putative kapA, Description = Importin subunit alpha, PFAM = PF01749;PF16186;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf07036_33739-46183' '(at1g10390 : 584.0) Nucleoporin autopeptidase; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, nuclear pore; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S59, nucleoporin (InterPro:IPR007230); BEST Arabidopsis thaliana protein match is: Nucleoporin autopeptidase (TAIR:AT1G59660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86541 : 193.0) no description available & (gnl|cdd|36063 : 82.1) no description available & (reliability: 1168.0) & (original description: Putative NUP98A, Description = Nuclear pore complex protein NUP98A, PFAM = PF04096)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf07089_281238-293930' '(at2g41620 : 1209.0) Nucleoporin interacting component (Nup93/Nic96-like) family protein; FUNCTIONS IN: protein binding; INVOLVED IN: transport; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoporin interacting component Nup93/Nic96 (InterPro:IPR007231); BEST Arabidopsis thaliana protein match is: Nucleoporin interacting component (Nup93/Nic96-like) family protein (TAIR:AT3G57350.1); Has 357 Blast hits to 350 proteins in 149 species: Archae - 0; Bacteria - 0; Metazoa - 168; Fungi - 130; Plants - 48; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37379 : 636.0) no description available & (gnl|cdd|67703 : 113.0) no description available & (reliability: 2418.0) & (original description: Putative NUP93A, Description = Nuclear pore complex protein NUP93A, PFAM = PF04097)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf07720_94919-102215' '(gnl|cdd|35339 : 309.0) no description available & (at3g25150 : 241.0) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT5G60980.2). & (gnl|cdd|29630 : 130.0) no description available & (reliability: 482.0) & (original description: Putative pco105214b, Description = Putative G3BP-like protein, PFAM = PF00076;PF02136)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf10250_22129-32904' '(gnl|cdd|35339 : 310.0) no description available & (at5g60980 : 284.0) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT3G25150.1); Has 36196 Blast hits to 15965 proteins in 1132 species: Archae - 9; Bacteria - 13386; Metazoa - 10288; Fungi - 3119; Plants - 4760; Viruses - 542; Other Eukaryotes - 4092 (source: NCBI BLink). & (gnl|cdd|29630 : 135.0) no description available & (reliability: 568.0) & (original description: Putative At5g60980, Description = AT5g60980/MSL3_100, PFAM = PF02136;PF00076)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf10616_23764-32953' '(gnl|cdd|35339 : 307.0) no description available & (at5g60980 : 281.0) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT3G25150.1); Has 36196 Blast hits to 15965 proteins in 1132 species: Archae - 9; Bacteria - 13386; Metazoa - 10288; Fungi - 3119; Plants - 4760; Viruses - 542; Other Eukaryotes - 4092 (source: NCBI BLink). & (gnl|cdd|29630 : 135.0) no description available & (reliability: 562.0) & (original description: Putative At5g60980, Description = AT5g60980/MSL3_100, PFAM = PF02136;PF00076)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf11162_59914-66214' '(at1g68910 : 315.0) Encodes one of the WPP domain-interacting proteins (WIT1/AT5G11390, WIT2/AT1G68910) required for RanGAP nuclear envelope association in root tip cells. Ran GTPase plays essential roles in multiple cellular processes, including nucleocytoplasmic transport, spindle formation, and postmitotic nuclear envelope reassembly. The cytoplasmic Ran GTPase activating protein RanGAP is critical to establish a functional RanGTP/RanGDP gradient across the nuclear envelope and is associated with the outer surface of the nuclear envelope in metazoan and higher plant cells. Arabidopsis thaliana RanGAP association with the root tip nuclear envelope requires a family of likely plant-specific nucleoporins combining coiled-coil and transmembrane domains (CC-TMD) and WPP domain-interacting proteins (WIPs). WIT1 and WIT2 have been identified as a second family of CC-TMD proteins, structurally similar, yet clearly distinct from the WIP family, that is required for RanGAP nuclear envelop association in root tip cells.; WPP domain-interacting protein 2 (WIT2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: WPP domain-interacting protein 1 (TAIR:AT5G11390.1). & (reliability: 630.0) & (original description: Putative BnaA02g14150D, Description = BnaA02g14150D protein, PFAM = )' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf11734_38325-63893' '(at5g17020 : 1849.0) Encodes a member of the exportin protein family (XPO1A) which functions as receptors for nuclear export. Binds to a variety of proteins having leucine rich export signals.Along with XPO1B involved with development of the male and female gametophytes.; exportin 1A (XPO1A); CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Exportin 1, C-terminal (InterPro:IPR014877), Armadillo-like helical (InterPro:IPR011989), Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: exportin 1B (TAIR:AT3G03110.1). & (gnl|cdd|37231 : 1086.0) no description available & (gnl|cdd|34704 : 956.0) no description available & (reliability: 3698.0) & (original description: Putative XPO1, Description = Protein EXPORTIN 1A, PFAM = PF08389;PF08767;PF03810)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf13164_31116-38732' '(at4g16143 : 889.0) Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.; importin alpha isoform 2 (IMPA-2); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 1 (TAIR:AT3G06720.2); Has 4654 Blast hits to 3364 proteins in 293 species: Archae - 4; Bacteria - 33; Metazoa - 1869; Fungi - 640; Plants - 1336; Viruses - 0; Other Eukaryotes - 772 (source: NCBI BLink). & (q71vm4|ima1a_orysa : 882.0) Importin alpha-1a subunit - Oryza sativa (Rice) & (gnl|cdd|35388 : 697.0) no description available & (gnl|cdd|34668 : 575.0) no description available & (reliability: 1778.0) & (original description: Putative IMPA2, Description = Importin subunit alpha-2, PFAM = PF01749;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514;PF16186)' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf17276_12394-18782' '(at1g68910 : 281.0) Encodes one of the WPP domain-interacting proteins (WIT1/AT5G11390, WIT2/AT1G68910) required for RanGAP nuclear envelope association in root tip cells. Ran GTPase plays essential roles in multiple cellular processes, including nucleocytoplasmic transport, spindle formation, and postmitotic nuclear envelope reassembly. The cytoplasmic Ran GTPase activating protein RanGAP is critical to establish a functional RanGTP/RanGDP gradient across the nuclear envelope and is associated with the outer surface of the nuclear envelope in metazoan and higher plant cells. Arabidopsis thaliana RanGAP association with the root tip nuclear envelope requires a family of likely plant-specific nucleoporins combining coiled-coil and transmembrane domains (CC-TMD) and WPP domain-interacting proteins (WIPs). WIT1 and WIT2 have been identified as a second family of CC-TMD proteins, structurally similar, yet clearly distinct from the WIP family, that is required for RanGAP nuclear envelop association in root tip cells.; WPP domain-interacting protein 2 (WIT2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: WPP domain-interacting protein 1 (TAIR:AT5G11390.1). & (reliability: 562.0) & (original description: Putative BnaA02g14150D, Description = BnaA02g14150D protein, PFAM = )' T '29.3.1' 'protein.targeting.nucleus' 'niben101scf30596_36739-41067' '(at3g07250 : 105.0) nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: flower, leaf; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Protein of unknown function DUF1675 (InterPro:IPR012463); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT5G48650.1); Has 5020 Blast hits to 2878 proteins in 309 species: Archae - 0; Bacteria - 77; Metazoa - 2136; Fungi - 614; Plants - 1253; Viruses - 84; Other Eukaryotes - 856 (source: NCBI BLink). & (gnl|cdd|71335 : 102.0) no description available & (reliability: 210.0) & (original description: Putative AFP, Description = Ninja-family protein AFP1, PFAM = PF16135;PF07897)' T '29.3.2' 'protein.targeting.mitochondria' 'nbv0.3scaffold17535_13674-25471' '(at3g20000 : 464.0) Encodes a component of the TOM receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. With TOM22, functions as the transit peptide receptor at the surface of the mitochondrial outer membrane and facilitates the movement of preproteins into the translocation pore.; translocase of the outer mitochondrial membrane 40 (TOM40); FUNCTIONS IN: voltage-gated anion channel activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein targeting to mitochondrion, anion transport; LOCATED IN: mitochondrial outer membrane, mitochondrion, mitochondrial inner membrane, plasma membrane, mitochondrial outer membrane translocase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Porin, eukaryotic type (InterPro:IPR001925); BEST Arabidopsis thaliana protein match is: Eukaryotic porin family protein (TAIR:AT1G50400.1); Has 530 Blast hits to 530 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 257; Fungi - 140; Plants - 72; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|38506 : 271.0) no description available & (gnl|cdd|85468 : 144.0) no description available & (reliability: 928.0) & (original description: Putative Sb41, Description = Porin family protein, PFAM = PF01459)' T '29.3.2' 'protein.targeting.mitochondria' 'nbv0.3scaffold21610_12522-20399' '(at5g50810 : 96.3) Encodes a small zinc finger-like protein that is a component of the mitochondrial protein import apparatus.; translocase inner membrane subunit 8 (TIM8); FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein targeting to mitochondrion, protein import into mitochondrial inner membrane; LOCATED IN: mitochondrion, mitochondrial inner membrane, mitochondrial intermembrane space; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, Tim8/9/10/13-zinc finger-like (InterPro:IPR004217); Has 688 Blast hits to 688 proteins in 171 species: Archae - 0; Bacteria - 0; Metazoa - 361; Fungi - 183; Plants - 116; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|38699 : 82.7) no description available & (reliability: 192.6) & (original description: Putative TIM8, Description = Mitochondrial import inner membrane translocase subunit TIM8, PFAM = PF02953)' T '29.3.2' 'protein.targeting.mitochondria' 'nbv0.3scaffold34488_15956-18525' '(gnl|cdd|38534 : 169.0) no description available & (at1g72750 : 158.0) translocase inner membrane subunit 23-2 (TIM23-2); FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, protein transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, mitochondrial inner membrane presequence translocase complex, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim23 (InterPro:IPR005681), Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: translocase of inner mitochondrial membrane 23 (TAIR:AT1G17530.1); Has 613 Blast hits to 613 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 286; Fungi - 136; Plants - 143; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|85997 : 101.0) no description available & (reliability: 316.0) & (original description: Putative TIM23-1, Description = Mitochondrial import inner membrane translocase subunit TIM23-1, PFAM = PF02466)' T '29.3.2' 'protein.targeting.mitochondria' 'nbv0.3scaffold35873_1944-4615' '(at3g02090 : 262.0) MPPBETA; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis; LOCATED IN: in 11 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) protein (TAIR:AT1G51980.1); Has 13067 Blast hits to 12610 proteins in 2372 species: Archae - 22; Bacteria - 8565; Metazoa - 1070; Fungi - 780; Plants - 365; Viruses - 3; Other Eukaryotes - 2262 (source: NCBI BLink). & (gnl|cdd|36178 : 230.0) no description available & (gnl|cdd|84943 : 153.0) no description available & (p29677|mppa_soltu : 83.6) Mitochondrial-processing peptidase alpha subunit, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (Ubiquinol-cytochrome-c reductase subunit II) (EC 1.10.2.2) - Solanum tuberosum (Potato) & (reliability: 524.0) & (original description: Putative mppB, Description = Mitochondrial-processing peptidase subunit beta, PFAM = PF00675)' T '29.3.2' 'protein.targeting.mitochondria' 'nbv0.3scaffold63924_4996-7652' '(at2g37410 : 222.0) Mitochondrial inner membrane translocase. Together with AtTIM17-1, TIM17-2 has a long C-terminal extension not present in other TIMs. The extension is located in the outer membrane and so TIM17-2 links the inner and outer mitochondrial membranes. The C-terminal region is essential for protein import into mitochondria via the general import pathway but is not necessary for import via the carrier pathway.; translocase inner membrane subunit 17-2 (TIM17-2); FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport, protein import into mitochondrial inner membrane; LOCATED IN: mitochondrial outer membrane, mitochondrion, mitochondrial inner membrane, mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: translocase inner membrane subunit 17-1 (TAIR:AT1G20350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36865 : 188.0) no description available & (gnl|cdd|85997 : 130.0) no description available & (reliability: 444.0) & (original description: Putative JM3, Description = Mitochondrial import inner membrane translocase subunit Tim17-B, PFAM = PF02466)' T '29.3.2' 'protein.targeting.mitochondria' 'nbv0.3scaffold66229_549-10230' '(at5g62050 : 306.0) essential factor for protein sorting and assembly into membranes; homolog of yeast oxidase assembly 1 (OXA1) (OXA1); FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein import into mitochondrial inner membrane, protein complex assembly; LOCATED IN: mitochondrion, mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Membrane insertion protein, OxaA/YidC, core (InterPro:IPR020001); BEST Arabidopsis thaliana protein match is: inner membrane protein OXA1-like (TAIR:AT2G46470.1); Has 6982 Blast hits to 6979 proteins in 2374 species: Archae - 0; Bacteria - 4991; Metazoa - 235; Fungi - 246; Plants - 190; Viruses - 0; Other Eukaryotes - 1320 (source: NCBI BLink). & (gnl|cdd|36453 : 173.0) no description available & (gnl|cdd|31050 : 101.0) no description available & (reliability: 560.0) & (original description: Putative OXA1, Description = Mitochondrial inner membrane protein OXA1, PFAM = PF02096)' T '29.3.2' 'protein.targeting.mitochondria' 'nbv0.5scaffold3343_15566-40751' '(at3g44370 : 452.0) Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain; FUNCTIONS IN: binding; INVOLVED IN: protein insertion into membrane; LOCATED IN: mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain (TAIR:AT1G65080.1); Has 1410 Blast hits to 1410 proteins in 539 species: Archae - 10; Bacteria - 840; Metazoa - 166; Fungi - 108; Plants - 98; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). & (gnl|cdd|36453 : 106.0) no description available & (reliability: 904.0) & (original description: Putative ALB3L3, Description = ALBINO3-like protein 3, mitochondrial, PFAM = PF02096)' T '29.3.2' 'protein.targeting.mitochondria' 'nbv0.5scaffold4416_152384-157600' '(at2g36070 : 182.0) One of two genes in Arabidopsis that encode a putative subunit of the mitochondrial inner membrane translocase complex. TIM44 subunit is thought to provide the energy for translocation via hydrolysis of ATP.; translocase inner membrane subunit 44-2 (TIM44-2); FUNCTIONS IN: protein-transmembrane transporting ATPase activity; INVOLVED IN: protein targeting to mitochondrion; LOCATED IN: mitochondrion, mitochondrial inner membrane, mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim44-related (InterPro:IPR007379); BEST Arabidopsis thaliana protein match is: translocase inner membrane subunit 44-1 (TAIR:AT2G20510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37791 : 147.0) no description available & (gnl|cdd|80064 : 85.3) no description available & (reliability: 364.0) & (original description: Putative At2g20510, Description = Import inner membrane translocase subunit TIM44-2, PFAM = PF04280)' T '29.3.2' 'protein.targeting.mitochondria' 'nbv0.5scaffold8315_4512-15791' '(at2g36070 : 295.0) One of two genes in Arabidopsis that encode a putative subunit of the mitochondrial inner membrane translocase complex. TIM44 subunit is thought to provide the energy for translocation via hydrolysis of ATP.; translocase inner membrane subunit 44-2 (TIM44-2); FUNCTIONS IN: protein-transmembrane transporting ATPase activity; INVOLVED IN: protein targeting to mitochondrion; LOCATED IN: mitochondrion, mitochondrial inner membrane, mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim44-related (InterPro:IPR007379); BEST Arabidopsis thaliana protein match is: translocase inner membrane subunit 44-1 (TAIR:AT2G20510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37791 : 187.0) no description available & (reliability: 590.0) & (original description: Putative BnaC09g10480D, Description = BnaC09g10480D protein, PFAM = )' T '29.3.2' 'protein.targeting.mitochondria' 'niben044scf00006784ctg009_1554-6882' '(at2g36070 : 167.0) One of two genes in Arabidopsis that encode a putative subunit of the mitochondrial inner membrane translocase complex. TIM44 subunit is thought to provide the energy for translocation via hydrolysis of ATP.; translocase inner membrane subunit 44-2 (TIM44-2); FUNCTIONS IN: protein-transmembrane transporting ATPase activity; INVOLVED IN: protein targeting to mitochondrion; LOCATED IN: mitochondrion, mitochondrial inner membrane, mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim44-related (InterPro:IPR007379); BEST Arabidopsis thaliana protein match is: translocase inner membrane subunit 44-1 (TAIR:AT2G20510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37791 : 132.0) no description available & (reliability: 334.0) & (original description: Putative At2g20510, Description = Import inner membrane translocase subunit TIM44-2, PFAM = PF04280)' T '29.3.2' 'protein.targeting.mitochondria' 'niben044scf00009193ctg033_25923-31048' '(at4g16160 : 186.0) Homologous to pea OEP16 and barley pPORA (OEP16), a member of Arabidopsis OEP16 family. Two OEP16 genes are closely related to each other and are conserved in all land plants, OEP16-2, also named OEP16-S, and OEP16-1 (renamed OEP16-L) are result of the gene duplication event that occurred prior to divergence of bryophytes and seed plants. Predominantly expressed in seed and is not inducible by cold treatment. atOEP16-S gained an additional exon. The promoter region of atOEP16-S (but not atOEP16-L) contains multiple G-box ABA-responsive elements. The atOEP16-S promoter conferred developmentally regulated seed- and pollen-specific GUS expression in tobacco.; ATOEP16-2; FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: plastid outer membrane, mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: outer plastid envelope protein 16-1 (TAIR:AT2G28900.1); Has 136 Blast hits to 136 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|85997 : 84.2) no description available & (reliability: 372.0) & (original description: Putative OEP162, Description = Outer envelope pore protein 16-2, chloroplastic, PFAM = PF02466)' T '29.3.2' 'protein.targeting.mitochondria' 'niben044scf00011669ctg010_46666-49795' '(at1g20350 : 203.0) mitochondrial inner membrane translocase; translocase inner membrane subunit 17-1 (TIM17-1); FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: translocase inner membrane subunit 17-2 (TAIR:AT2G37410.2); Has 784 Blast hits to 781 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 333; Fungi - 216; Plants - 165; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36865 : 189.0) no description available & (gnl|cdd|85997 : 130.0) no description available & (reliability: 406.0) & (original description: Putative tim17, Description = Mitochondrial import inner membrane translocase subunit Tim17-B, PFAM = PF02466)' T '29.3.2' 'protein.targeting.mitochondria' 'niben044scf00011996ctg001_1-25908' '(at3g44370 : 359.0) Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain; FUNCTIONS IN: binding; INVOLVED IN: protein insertion into membrane; LOCATED IN: mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain (TAIR:AT1G65080.1); Has 1410 Blast hits to 1410 proteins in 539 species: Archae - 10; Bacteria - 840; Metazoa - 166; Fungi - 108; Plants - 98; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). & (reliability: 718.0) & (original description: Putative ALB3L2, Description = ALBINO3-like protein 3, mitochondrial, PFAM = PF02096)' T '29.3.2' 'protein.targeting.mitochondria' 'niben044scf00012823ctg012_3062-13929' '(at2g36070 : 282.0) One of two genes in Arabidopsis that encode a putative subunit of the mitochondrial inner membrane translocase complex. TIM44 subunit is thought to provide the energy for translocation via hydrolysis of ATP.; translocase inner membrane subunit 44-2 (TIM44-2); FUNCTIONS IN: protein-transmembrane transporting ATPase activity; INVOLVED IN: protein targeting to mitochondrion; LOCATED IN: mitochondrion, mitochondrial inner membrane, mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim44-related (InterPro:IPR007379); BEST Arabidopsis thaliana protein match is: translocase inner membrane subunit 44-1 (TAIR:AT2G20510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37791 : 191.0) no description available & (reliability: 564.0) & (original description: Putative At2g20510, Description = Import inner membrane translocase subunit TIM44-2, PFAM = )' T '29.3.2' 'protein.targeting.mitochondria' 'niben044scf00020748ctg001_2652-16771' '(p29677|mppa_soltu : 791.0) Mitochondrial-processing peptidase alpha subunit, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (Ubiquinol-cytochrome-c reductase subunit II) (EC 1.10.2.2) - Solanum tuberosum (Potato) & (at1g51980 : 574.0) Insulinase (Peptidase family M16) protein; FUNCTIONS IN: metalloendopeptidase activity, ATP binding; INVOLVED IN: proteolysis, response to salt stress; LOCATED IN: mitochondrion, plasma membrane, plastid, mitochondrial respiratory chain complex III, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: mitochondrial processing peptidase alpha subunit (TAIR:AT3G16480.1); Has 5945 Blast hits to 5839 proteins in 1469 species: Archae - 10; Bacteria - 3395; Metazoa - 673; Fungi - 538; Plants - 242; Viruses - 3; Other Eukaryotes - 1084 (source: NCBI BLink). & (gnl|cdd|37278 : 502.0) no description available & (gnl|cdd|30957 : 199.0) no description available & (reliability: 1148.0) & (original description: Putative MPP, Description = Mitochondrial processing peptidase, PFAM = PF00675;PF05193)' T '29.3.2' 'protein.targeting.mitochondria' 'niben044scf00027821ctg001_1967-12703' '(p29677|mppa_soltu : 869.0) Mitochondrial-processing peptidase alpha subunit, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (Ubiquinol-cytochrome-c reductase subunit II) (EC 1.10.2.2) - Solanum tuberosum (Potato) & (at1g51980 : 576.0) Insulinase (Peptidase family M16) protein; FUNCTIONS IN: metalloendopeptidase activity, ATP binding; INVOLVED IN: proteolysis, response to salt stress; LOCATED IN: mitochondrion, plasma membrane, plastid, mitochondrial respiratory chain complex III, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: mitochondrial processing peptidase alpha subunit (TAIR:AT3G16480.1); Has 5945 Blast hits to 5839 proteins in 1469 species: Archae - 10; Bacteria - 3395; Metazoa - 673; Fungi - 538; Plants - 242; Viruses - 3; Other Eukaryotes - 1084 (source: NCBI BLink). & (gnl|cdd|37278 : 511.0) no description available & (gnl|cdd|30957 : 198.0) no description available & (reliability: 1152.0) & (original description: Putative MPP, Description = Mitochondrial-processing peptidase subunit alpha, PFAM = PF05193;PF00675)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf00094_349921-356852' '(at3g10110 : 185.0) maternal effect embryo arrest 67 (MEE67); FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport, embryo development ending in seed dormancy; LOCATED IN: mitochondrial inner membrane, chloroplast, mitochondrial inner membrane presequence translocase complex; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (TAIR:AT1G18320.1); Has 680 Blast hits to 680 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 258; Fungi - 229; Plants - 130; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|38435 : 165.0) no description available & (gnl|cdd|85997 : 88.4) no description available & (reliability: 370.0) & (original description: Putative MEE67, Description = Mitochondrial import inner membrane translocase subunit TIM22-1, PFAM = PF02466)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf00109_1008348-1016701' '(gnl|cdd|70039 : 314.0) no description available & (p92792|tom20_soltu : 294.0) Mitochondrial import receptor subunit TOM20 (Translocase of outer membrane 20 kDa subunit) - Solanum tuberosum (Potato) & (at3g27080 : 219.0) Component of the TOM complex involved in transport of nuclear-encoded mitochondrial proteins; translocase of outer membrane 20 kDa subunit 3 (TOM20-3); CONTAINS InterPro DOMAIN/s: Plant specific mitochondrial import receptor subunit TOM20 (InterPro:IPR010547); BEST Arabidopsis thaliana protein match is: translocase outer membrane 20-1 (TAIR:AT3G27070.1); Has 97 Blast hits to 97 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative TOM20, Description = Mitochondrial import receptor subunit TOM20, PFAM = PF06552)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf00494_189307-214731' '(at3g44370 : 395.0) Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain; FUNCTIONS IN: binding; INVOLVED IN: protein insertion into membrane; LOCATED IN: mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain (TAIR:AT1G65080.1); Has 1410 Blast hits to 1410 proteins in 539 species: Archae - 10; Bacteria - 840; Metazoa - 166; Fungi - 108; Plants - 98; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). & (gnl|cdd|36453 : 82.8) no description available & (reliability: 790.0) & (original description: Putative ALB3L3, Description = ALBINO3-like protein 3, mitochondrial, PFAM = )' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf00683_346949-354015' '(at5g55510 : 204.0) Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein; FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrial inner membrane presequence translocase complex, chloroplast envelope; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (TAIR:AT4G26670.1); Has 535 Blast hits to 535 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 181; Fungi - 197; Plants - 120; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|36865 : 108.0) no description available & (gnl|cdd|85997 : 95.3) no description available & (reliability: 408.0) & (original description: Putative TIM22-3, Description = Mitochondrial import inner membrane translocase subunit TIM22-3, PFAM = PF02466)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf01146_652473-670008' '(p29677|mppa_soltu : 783.0) Mitochondrial-processing peptidase alpha subunit, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (Ubiquinol-cytochrome-c reductase subunit II) (EC 1.10.2.2) - Solanum tuberosum (Potato) & (at1g51980 : 577.0) Insulinase (Peptidase family M16) protein; FUNCTIONS IN: metalloendopeptidase activity, ATP binding; INVOLVED IN: proteolysis, response to salt stress; LOCATED IN: mitochondrion, plasma membrane, plastid, mitochondrial respiratory chain complex III, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: mitochondrial processing peptidase alpha subunit (TAIR:AT3G16480.1); Has 5945 Blast hits to 5839 proteins in 1469 species: Archae - 10; Bacteria - 3395; Metazoa - 673; Fungi - 538; Plants - 242; Viruses - 3; Other Eukaryotes - 1084 (source: NCBI BLink). & (gnl|cdd|37278 : 504.0) no description available & (gnl|cdd|30957 : 201.0) no description available & (reliability: 1154.0) & (original description: Putative At1g51980, Description = Probable mitochondrial-processing peptidase subunit alpha-1, mitochondrial, PFAM = PF00675;PF05193)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf01406_221266-232120' '(at2g29530 : 112.0) Encodes a small zinc finger-like protein that is a component of the mitochondrial protein import apparatus.; TIM10; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein targeting to mitochondrion, protein import into mitochondrial inner membrane; LOCATED IN: mitochondrion, mitochondrial inner membrane, mitochondrial intermembrane space; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, Tim8/9/10/13-zinc finger-like (InterPro:IPR004217); Has 390 Blast hits to 390 proteins in 171 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 145; Plants - 65; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|38690 : 83.5) no description available & (reliability: 224.0) & (original description: Putative TIM10, Description = Mitochondrial import inner membrane translocase subunit TIM10, PFAM = PF02953)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf01451_567750-576686' '(at3g20000 : 464.0) Encodes a component of the TOM receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. With TOM22, functions as the transit peptide receptor at the surface of the mitochondrial outer membrane and facilitates the movement of preproteins into the translocation pore.; translocase of the outer mitochondrial membrane 40 (TOM40); FUNCTIONS IN: voltage-gated anion channel activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein targeting to mitochondrion, anion transport; LOCATED IN: mitochondrial outer membrane, mitochondrion, mitochondrial inner membrane, plasma membrane, mitochondrial outer membrane translocase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Porin, eukaryotic type (InterPro:IPR001925); BEST Arabidopsis thaliana protein match is: Eukaryotic porin family protein (TAIR:AT1G50400.1); Has 530 Blast hits to 530 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 257; Fungi - 140; Plants - 72; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|38506 : 276.0) no description available & (gnl|cdd|85468 : 150.0) no description available & (reliability: 928.0) & (original description: Putative Sb41, Description = Porin family protein, PFAM = PF01459)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf01587_17168-19875' '(at1g20350 : 201.0) mitochondrial inner membrane translocase; translocase inner membrane subunit 17-1 (TIM17-1); FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: translocase inner membrane subunit 17-2 (TAIR:AT2G37410.2); Has 784 Blast hits to 781 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 333; Fungi - 216; Plants - 165; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|36865 : 188.0) no description available & (gnl|cdd|85997 : 130.0) no description available & (reliability: 402.0) & (original description: Putative tim17, Description = Mitochondrial import inner membrane translocase subunit Tim17-B, PFAM = PF02466)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf01626_242343-253633' '(at2g36070 : 297.0) One of two genes in Arabidopsis that encode a putative subunit of the mitochondrial inner membrane translocase complex. TIM44 subunit is thought to provide the energy for translocation via hydrolysis of ATP.; translocase inner membrane subunit 44-2 (TIM44-2); FUNCTIONS IN: protein-transmembrane transporting ATPase activity; INVOLVED IN: protein targeting to mitochondrion; LOCATED IN: mitochondrion, mitochondrial inner membrane, mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim44-related (InterPro:IPR007379); BEST Arabidopsis thaliana protein match is: translocase inner membrane subunit 44-1 (TAIR:AT2G20510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37791 : 190.0) no description available & (reliability: 594.0) & (original description: Putative BnaA07g00370D, Description = BnaA07g00370D protein, PFAM = )' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf01626_255730-260023' '(at2g36070 : 184.0) One of two genes in Arabidopsis that encode a putative subunit of the mitochondrial inner membrane translocase complex. TIM44 subunit is thought to provide the energy for translocation via hydrolysis of ATP.; translocase inner membrane subunit 44-2 (TIM44-2); FUNCTIONS IN: protein-transmembrane transporting ATPase activity; INVOLVED IN: protein targeting to mitochondrion; LOCATED IN: mitochondrion, mitochondrial inner membrane, mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim44-related (InterPro:IPR007379); BEST Arabidopsis thaliana protein match is: translocase inner membrane subunit 44-1 (TAIR:AT2G20510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37791 : 148.0) no description available & (gnl|cdd|80064 : 87.2) no description available & (reliability: 368.0) & (original description: Putative At2g20510, Description = Import inner membrane translocase subunit TIM44-2, PFAM = PF04280)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf01927_676327-687442' '(p29677|mppa_soltu : 860.0) Mitochondrial-processing peptidase alpha subunit, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (Ubiquinol-cytochrome-c reductase subunit II) (EC 1.10.2.2) - Solanum tuberosum (Potato) & (at1g51980 : 573.0) Insulinase (Peptidase family M16) protein; FUNCTIONS IN: metalloendopeptidase activity, ATP binding; INVOLVED IN: proteolysis, response to salt stress; LOCATED IN: mitochondrion, plasma membrane, plastid, mitochondrial respiratory chain complex III, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: mitochondrial processing peptidase alpha subunit (TAIR:AT3G16480.1); Has 5945 Blast hits to 5839 proteins in 1469 species: Archae - 10; Bacteria - 3395; Metazoa - 673; Fungi - 538; Plants - 242; Viruses - 3; Other Eukaryotes - 1084 (source: NCBI BLink). & (gnl|cdd|37278 : 501.0) no description available & (gnl|cdd|30957 : 199.0) no description available & (reliability: 1146.0) & (original description: Putative MPP, Description = Mitochondrial-processing peptidase subunit alpha, PFAM = PF00675;PF05193)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf01934_98783-103584' '(at4g16160 : 185.0) Homologous to pea OEP16 and barley pPORA (OEP16), a member of Arabidopsis OEP16 family. Two OEP16 genes are closely related to each other and are conserved in all land plants, OEP16-2, also named OEP16-S, and OEP16-1 (renamed OEP16-L) are result of the gene duplication event that occurred prior to divergence of bryophytes and seed plants. Predominantly expressed in seed and is not inducible by cold treatment. atOEP16-S gained an additional exon. The promoter region of atOEP16-S (but not atOEP16-L) contains multiple G-box ABA-responsive elements. The atOEP16-S promoter conferred developmentally regulated seed- and pollen-specific GUS expression in tobacco.; ATOEP16-2; FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: plastid outer membrane, mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: outer plastid envelope protein 16-1 (TAIR:AT2G28900.1); Has 136 Blast hits to 136 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|85997 : 83.8) no description available & (reliability: 370.0) & (original description: Putative OEP162, Description = Outer envelope pore protein 16-2, chloroplastic, PFAM = PF02466)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf02466_142853-149689' '(q9xgx8|tim9_mescr : 150.0) Mitochondrial import inner membrane translocase subunit Tim9 - Mesembryanthemum crystallinum (Common ice plant) & (at3g46560 : 136.0) Encodes a small zinc finger-like protein that is a component of the mitochondrial protein import apparatus.; TIM9; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, Tim8/9/10/13-zinc finger-like (InterPro:IPR004217); Has 542 Blast hits to 542 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 275; Fungi - 165; Plants - 60; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|38689 : 86.6) no description available & (reliability: 272.0) & (original description: Putative TIM9, Description = Mitochondrial import inner membrane translocase subunit Tim9, PFAM = PF02953)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf03768_70788-78164' '(at5g24650 : 258.0) Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein; FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: chloroplast, plasma membrane, vacuole, mitochondrial inner membrane presequence translocase complex, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sterile alpha motif, type 1 (InterPro:IPR021129), Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (TAIR:AT3G49560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 516.0) & (original description: Putative TIM22B, Description = Mitochondrial inner membrane translocase, PFAM = PF00536;PF02466)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf03817_16221-26078' '(at3g10110 : 175.0) maternal effect embryo arrest 67 (MEE67); FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport, embryo development ending in seed dormancy; LOCATED IN: mitochondrial inner membrane, chloroplast, mitochondrial inner membrane presequence translocase complex; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (TAIR:AT1G18320.1); Has 680 Blast hits to 680 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 258; Fungi - 229; Plants - 130; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|38435 : 167.0) no description available & (gnl|cdd|85997 : 90.3) no description available & (reliability: 350.0) & (original description: Putative MEE67, Description = Mitochondrial import inner membrane translocase subunit TIM22-1, PFAM = PF02466)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf03864_131277-137058' '(gnl|cdd|36944 : 93.2) no description available & (q9xgy5|tim13_orysa : 82.8) Mitochondrial import inner membrane translocase subunit Tim13 - Oryza sativa (Rice) & (at1g61570 : 81.6) Encodes a putative small zinc finger-like protein (TIM13); nucleus-encoded gene whose product is found in the mitochondrial inner membrane space.; translocase of the inner mitochondrial membrane 13 (TIM13); FUNCTIONS IN: copper ion binding, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein import into mitochondrial inner membrane, protein targeting to mitochondrion; LOCATED IN: mitochondrion, mitochondrial inner membrane, mitochondrial intermembrane space; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, Tim8/9/10/13-zinc finger-like (InterPro:IPR004217); Has 603 Blast hits to 603 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 319; Fungi - 124; Plants - 140; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative TIM13, Description = Mitochondrial import inner membrane translocase subunit TIM13, PFAM = PF02953)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf04160_31708-50244' '(at5g62050 : 347.0) essential factor for protein sorting and assembly into membranes; homolog of yeast oxidase assembly 1 (OXA1) (OXA1); FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein import into mitochondrial inner membrane, protein complex assembly; LOCATED IN: mitochondrion, mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Membrane insertion protein, OxaA/YidC, core (InterPro:IPR020001); BEST Arabidopsis thaliana protein match is: inner membrane protein OXA1-like (TAIR:AT2G46470.1); Has 6982 Blast hits to 6979 proteins in 2374 species: Archae - 0; Bacteria - 4991; Metazoa - 235; Fungi - 246; Plants - 190; Viruses - 0; Other Eukaryotes - 1320 (source: NCBI BLink). & (gnl|cdd|36453 : 202.0) no description available & (gnl|cdd|31050 : 123.0) no description available & (reliability: 638.0) & (original description: Putative OXA1, Description = Mitochondrial inner membrane protein OXA1, PFAM = PF02096)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf04740_6933-10167' '(at2g42210 : 197.0) Homologous to pea OEP16 and barley pPORA (OEP16), a member of Arabidopsis OEP16 family.; OEP16-3; FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38435 : 105.0) no description available & (reliability: 394.0) & (original description: Putative OEP163, Description = Outer envelope pore protein 16-3, chloroplastic/mitochondrial, PFAM = PF02466)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf04828_3962-6516' '(at1g72750 : 191.0) translocase inner membrane subunit 23-2 (TIM23-2); FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, protein transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, mitochondrial inner membrane presequence translocase complex, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim23 (InterPro:IPR005681), Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: translocase of inner mitochondrial membrane 23 (TAIR:AT1G17530.1); Has 613 Blast hits to 613 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 286; Fungi - 136; Plants - 143; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|38534 : 173.0) no description available & (gnl|cdd|85997 : 98.8) no description available & (reliability: 382.0) & (original description: Putative TIM23-1, Description = Mitochondrial import inner membrane translocase subunit TIM23-1, PFAM = PF02466)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf05095_250484-256590' '(gnl|cdd|70039 : 320.0) no description available & (p92792|tom20_soltu : 314.0) Mitochondrial import receptor subunit TOM20 (Translocase of outer membrane 20 kDa subunit) - Solanum tuberosum (Potato) & (at3g27080 : 225.0) Component of the TOM complex involved in transport of nuclear-encoded mitochondrial proteins; translocase of outer membrane 20 kDa subunit 3 (TOM20-3); CONTAINS InterPro DOMAIN/s: Plant specific mitochondrial import receptor subunit TOM20 (InterPro:IPR010547); BEST Arabidopsis thaliana protein match is: translocase outer membrane 20-1 (TAIR:AT3G27070.1); Has 97 Blast hits to 97 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 450.0) & (original description: Putative TOM20, Description = Mitochondrial import receptor subunit TOM20, PFAM = PF06552)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf05308_12612-21385' '(at3g02090 : 763.0) MPPBETA; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis; LOCATED IN: in 11 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) protein (TAIR:AT1G51980.1); Has 13067 Blast hits to 12610 proteins in 2372 species: Archae - 22; Bacteria - 8565; Metazoa - 1070; Fungi - 780; Plants - 365; Viruses - 3; Other Eukaryotes - 2262 (source: NCBI BLink). & (gnl|cdd|36178 : 633.0) no description available & (gnl|cdd|30957 : 283.0) no description available & (p29677|mppa_soltu : 185.0) Mitochondrial-processing peptidase alpha subunit, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (Ubiquinol-cytochrome-c reductase subunit II) (EC 1.10.2.2) - Solanum tuberosum (Potato) & (reliability: 1526.0) & (original description: Putative mppB, Description = Mitochondrial-processing peptidase subunit beta, PFAM = PF05193;PF00675)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf05671_101903-104286' '(at3g62880 : 127.0) Homologous to pea OEP16 and barley pPORA (OEP16), a member of Arabidopsis OEP16 family.; ATOEP16-4; FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: plastid outer membrane, mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative OEP164, Description = Outer envelope pore protein 16-4, chloroplastic, PFAM = PF02466)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf05811_259530-274210' '(at2g29530 : 120.0) Encodes a small zinc finger-like protein that is a component of the mitochondrial protein import apparatus.; TIM10; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein targeting to mitochondrion, protein import into mitochondrial inner membrane; LOCATED IN: mitochondrion, mitochondrial inner membrane, mitochondrial intermembrane space; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, Tim8/9/10/13-zinc finger-like (InterPro:IPR004217); Has 390 Blast hits to 390 proteins in 171 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 145; Plants - 65; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|38690 : 92.7) no description available & (reliability: 240.0) & (original description: Putative TIM10, Description = Mitochondrial import inner membrane translocase subunit TIM10, PFAM = PF02953)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf05823_310871-313197' '(at5g43970 : 86.3) Subunit of the TOM complex, a translocase in the outer mitochondrial membrane that selectively allows proteins with a mitochondrial targeting sequence to enter the mitochondrion.; translocase of outer membrane 22-V (TOM22-V); FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein targeting to mitochondrion; LOCATED IN: mitochondrion, plasma membrane, mitochondrial outer membrane translocase complex, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial outer membrane translocase complex, subunit Tom22, plant (InterPro:IPR017411); BEST Arabidopsis thaliana protein match is: translocase of outer membrane 22-I (TAIR:AT1G04070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative TOM9-2, Description = Mitochondrial import receptor subunit TOM9-2, PFAM = PF04281)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf08574_35611-41158' '(at5g55510 : 202.0) Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein; FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrial inner membrane presequence translocase complex, chloroplast envelope; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (TAIR:AT4G26670.1); Has 535 Blast hits to 535 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 181; Fungi - 197; Plants - 120; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|36865 : 109.0) no description available & (gnl|cdd|85997 : 96.9) no description available & (reliability: 404.0) & (original description: Putative TIM22-2, Description = Mitochondrial import inner membrane translocase subunit TIM22-2, PFAM = PF02466)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf09170_72662-74860' '(gnl|cdd|38534 : 171.0) no description available & (at1g72750 : 159.0) translocase inner membrane subunit 23-2 (TIM23-2); FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, protein transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, mitochondrial inner membrane presequence translocase complex, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim23 (InterPro:IPR005681), Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: translocase of inner mitochondrial membrane 23 (TAIR:AT1G17530.1); Has 613 Blast hits to 613 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 286; Fungi - 136; Plants - 143; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|85997 : 101.0) no description available & (reliability: 318.0) & (original description: Putative TIM23-1, Description = Mitochondrial import inner membrane translocase subunit TIM23-1, PFAM = PF02466)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf11124_153630-159048' '(at3g25120 : 157.0) Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein; FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrial inner membrane, mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); Has 39 Blast hits to 39 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 33; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative At3g25120, Description = At2g45250, PFAM = )' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf13118_132689-137331' '(at3g62880 : 126.0) Homologous to pea OEP16 and barley pPORA (OEP16), a member of Arabidopsis OEP16 family.; ATOEP16-4; FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: plastid outer membrane, mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative OEP164, Description = Outer envelope pore protein 16-4, chloroplastic, PFAM = PF02466)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf14562_42226-46746' '(q9xgx7|tim9_orysa : 156.0) Mitochondrial import inner membrane translocase subunit Tim9 - Oryza sativa (Rice) & (at3g46560 : 140.0) Encodes a small zinc finger-like protein that is a component of the mitochondrial protein import apparatus.; TIM9; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, Tim8/9/10/13-zinc finger-like (InterPro:IPR004217); Has 542 Blast hits to 542 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 275; Fungi - 165; Plants - 60; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|38689 : 90.4) no description available & (reliability: 280.0) & (original description: Putative TIM9, Description = Mitochondrial import inner membrane translocase subunit Tim9, PFAM = PF02953)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf14939_207975-212732' '(gnl|cdd|70039 : 310.0) no description available & (p92792|tom20_soltu : 289.0) Mitochondrial import receptor subunit TOM20 (Translocase of outer membrane 20 kDa subunit) - Solanum tuberosum (Potato) & (at3g27080 : 213.0) Component of the TOM complex involved in transport of nuclear-encoded mitochondrial proteins; translocase of outer membrane 20 kDa subunit 3 (TOM20-3); CONTAINS InterPro DOMAIN/s: Plant specific mitochondrial import receptor subunit TOM20 (InterPro:IPR010547); BEST Arabidopsis thaliana protein match is: translocase outer membrane 20-1 (TAIR:AT3G27070.1); Has 97 Blast hits to 97 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative TOM20, Description = Mitochondrial import receptor subunit TOM20, PFAM = PF06552)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf15476_85118-96082' '(at3g02090 : 738.0) MPPBETA; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis; LOCATED IN: in 11 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) protein (TAIR:AT1G51980.1); Has 13067 Blast hits to 12610 proteins in 2372 species: Archae - 22; Bacteria - 8565; Metazoa - 1070; Fungi - 780; Plants - 365; Viruses - 3; Other Eukaryotes - 2262 (source: NCBI BLink). & (gnl|cdd|36178 : 625.0) no description available & (gnl|cdd|30957 : 279.0) no description available & (p29677|mppa_soltu : 166.0) Mitochondrial-processing peptidase alpha subunit, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (Ubiquinol-cytochrome-c reductase subunit II) (EC 1.10.2.2) - Solanum tuberosum (Potato) & (reliability: 1476.0) & (original description: Putative mppB, Description = Mitochondrial-processing peptidase subunit beta, PFAM = PF05193;PF00675)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf15792_106842-121007' '(gnl|cdd|36944 : 85.9) no description available & (at1g61570 : 84.7) Encodes a putative small zinc finger-like protein (TIM13); nucleus-encoded gene whose product is found in the mitochondrial inner membrane space.; translocase of the inner mitochondrial membrane 13 (TIM13); FUNCTIONS IN: copper ion binding, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein import into mitochondrial inner membrane, protein targeting to mitochondrion; LOCATED IN: mitochondrion, mitochondrial inner membrane, mitochondrial intermembrane space; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, Tim8/9/10/13-zinc finger-like (InterPro:IPR004217); Has 603 Blast hits to 603 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 319; Fungi - 124; Plants - 140; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative TIM13, Description = Mitochondrial import inner membrane translocase subunit TIM13, PFAM = PF02953)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf17290_40037-58246' '(at2g19080 : 286.0) metaxin-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein targeting to mitochondrion; LOCATED IN: mitochondrial outer membrane, mitochondrion, mitochondrial inner membrane, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Outer mitochondrial membrane transport complex protein, Metaxin (InterPro:IPR017410); Has 480 Blast hits to 480 proteins in 107 species: Archae - 0; Bacteria - 61; Metazoa - 333; Fungi - 17; Plants - 57; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|38238 : 188.0) no description available & (reliability: 572.0) & (original description: Putative MTX1, Description = Mitochondrial outer membrane import complex protein METAXIN, PFAM = PF17171;PF17172)' T '29.3.2' 'protein.targeting.mitochondria' 'niben101scf20828_24846-32723' '(at5g50810 : 96.3) Encodes a small zinc finger-like protein that is a component of the mitochondrial protein import apparatus.; translocase inner membrane subunit 8 (TIM8); FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein targeting to mitochondrion, protein import into mitochondrial inner membrane; LOCATED IN: mitochondrion, mitochondrial inner membrane, mitochondrial intermembrane space; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, Tim8/9/10/13-zinc finger-like (InterPro:IPR004217); Has 688 Blast hits to 688 proteins in 171 species: Archae - 0; Bacteria - 0; Metazoa - 361; Fungi - 183; Plants - 116; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|38699 : 82.7) no description available & (reliability: 192.6) & (original description: Putative TIM8, Description = Mitochondrial import inner membrane translocase subunit TIM8, PFAM = PF02953)' T '29.3.3' 'protein.targeting.chloroplast' 'nbv0.3scaffold8857_4534-8333' '(at3g24590 : 196.0) Encodes a signal peptidase Plsp1 (plastidic type I signal peptidase 1). Required for thylakoid development. Functions in the maturation of the 75-kD component of the translocon at the outer envelope membrane of chloroplasts and oxygen evolving complex subunit 33 (OE33).; plastidic type i signal peptidase 1 (PLSP1); FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis, thylakoid membrane organization, protein maturation; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, plastid envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (InterPro:IPR011056), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927), Peptidase S26A, signal peptidase I, conserved site (InterPro:IPR019758), Peptidase S26, conserved region (InterPro:IPR019533), Peptidase S26A, signal peptidase I (InterPro:IPR000223), Peptidase S26A, signal peptidase I, serine active site (InterPro:IPR019756); BEST Arabidopsis thaliana protein match is: Peptidase S24/S26A/S26B/S26C family protein (TAIR:AT1G06870.1); Has 9773 Blast hits to 9438 proteins in 2404 species: Archae - 0; Bacteria - 7280; Metazoa - 206; Fungi - 105; Plants - 230; Viruses - 0; Other Eukaryotes - 1952 (source: NCBI BLink). & (gnl|cdd|35392 : 91.2) no description available & (reliability: 392.0) & (original description: Putative lepB, Description = Signal peptidase I, PFAM = PF00717)' T '29.3.3' 'protein.targeting.chloroplast' 'nbv0.3scaffold22854_22920-29314' '(at4g02510 : 951.0) An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly.; translocon at the outer envelope membrane of chloroplasts 159 (TOC159); FUNCTIONS IN: transmembrane receptor activity, GTPase activity; INVOLVED IN: protein targeting to chloroplast; LOCATED IN: chloroplast outer membrane, cytosol, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chloroplast protein import component Toc86/159 (InterPro:IPR005690), AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: multimeric translocon complex in the outer envelope membrane 132 (TAIR:AT2G16640.1); Has 20720 Blast hits to 13966 proteins in 1613 species: Archae - 439; Bacteria - 5942; Metazoa - 6041; Fungi - 2379; Plants - 1534; Viruses - 151; Other Eukaryotes - 4234 (source: NCBI BLink). & (gnl|cdd|57945 : 358.0) no description available & (q41009|toc34_pea : 111.0) Translocase of chloroplast 34 (EC 3.6.5.-) (34 kDa chloroplast outer envelope protein) (GTP-binding protein OEP34) (GTP-binding protein IAP34) - Pisum sativum (Garden pea) & (reliability: 1902.0) & (original description: Putative PPI2, Description = Translocase of chloroplast 159, chloroplastic, PFAM = PF11886;PF04548)' T '29.3.3' 'protein.targeting.chloroplast' 'nbv0.3scaffold32588_1033-4474' '(at4g01800 : 237.0) Encodes the ATPase subunit of the chloroplast Sec translocation machinery which plays an essential role in chloroplast biogenesis and the regulation of photosynthesis, the absence of which triggers a retrograde signal, eventually leading to a reprogramming of chloroplast and mitochondrial gene expression.; Albino or Glassy Yellow 1 (AGY1); FUNCTIONS IN: ATPase activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity, ATP binding; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SecA, preprotein translocase (InterPro:IPR022491), SecA motor DEAD (InterPro:IPR014018), SecA Wing/Scaffold (InterPro:IPR011116), SecA preprotein, cross-linking domain (InterPro:IPR011130), SecA DEAD-like (InterPro:IPR011115), SecA conserved site (InterPro:IPR020937), SecA protein (InterPro:IPR000185); BEST Arabidopsis thaliana protein match is: Preprotein translocase SecA family protein (TAIR:AT1G21650.1). & (q41062|seca_pea : 237.0) Preprotein translocase secA subunit, chloroplast precursor - Pisum sativum (Garden pea) & (gnl|cdd|84390 : 223.0) no description available & (reliability: 474.0) & (original description: Putative SecA, Description = Putative preprotein translocase, PFAM = PF07517)' T '29.3.3' 'protein.targeting.chloroplast' 'nbv0.3scaffold33161_10361-18673' '(at3g23710 : 244.0) Tic22-like family protein; LOCATED IN: chloroplast, chloroplast inner membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tic22-like (InterPro:IPR007378); BEST Arabidopsis thaliana protein match is: Tic22-like family protein (TAIR:AT4G33350.1); Has 104 Blast hits to 104 proteins in 42 species: Archae - 0; Bacteria - 39; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|67874 : 207.0) no description available & (reliability: 488.0) & (original description: Putative TIC22L, Description = Protein TIC 22-like, chloroplastic, PFAM = PF04278)' T '29.3.3' 'protein.targeting.chloroplast' 'nbv0.3scaffold35291_15781-20558' '(at1g06870 : 382.0) Peptidase S24/S26A/S26B/S26C family protein; FUNCTIONS IN: serine-type peptidase activity, peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (InterPro:IPR011056), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927), Peptidase S26A, signal peptidase I, conserved site (InterPro:IPR019758), Peptidase S26, conserved region (InterPro:IPR019533), Peptidase S26A, signal peptidase I (InterPro:IPR000223), Peptidase S26A, signal peptidase I, serine active site (InterPro:IPR019756); BEST Arabidopsis thaliana protein match is: thylakoid processing peptide (TAIR:AT2G30440.1); Has 9578 Blast hits to 9341 proteins in 2371 species: Archae - 0; Bacteria - 7160; Metazoa - 214; Fungi - 105; Plants - 244; Viruses - 0; Other Eukaryotes - 1855 (source: NCBI BLink). & (gnl|cdd|35392 : 168.0) no description available & (reliability: 736.0) & (original description: Putative TPP2, Description = Probable thylakoidal processing peptidase 2, chloroplastic, PFAM = PF10502)' T '29.3.3' 'protein.targeting.chloroplast' 'nbv0.3scaffold38728_3519-17491' '(at1g06950 : 1164.0) Encodes a protein thought to be a part of the translocon at the chloroplast inner envelope. Involved in protein import into the chloroplast and chloroplast biogenesis.; translocon at the inner envelope membrane of chloroplasts 110 (TIC110); INVOLVED IN: protein import into chloroplast stroma, chloroplast organization; LOCATED IN: chloroplast, membrane, chloroplast envelope, Tic complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 131 Blast hits to 118 proteins in 52 species: Archae - 4; Bacteria - 6; Metazoa - 16; Fungi - 9; Plants - 66; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 2328.0) & (original description: Putative TIC110, Description = Protein TIC110, chloroplastic, PFAM = PF16940;PF16940)' T '29.3.3' 'protein.targeting.chloroplast' 'nbv0.3scaffold48973_9336-15571' '(at2g24820 : 748.0) translocon at the inner envelope membrane of chloroplasts 55-II (TIC55-II); FUNCTIONS IN: oxidoreductase activity, 2 iron, 2 sulfur cluster binding, chlorophyllide a oxygenase [overall] activity; INVOLVED IN: protein targeting to chloroplast; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Pheophorbide a oxygenase (InterPro:IPR013626); BEST Arabidopsis thaliana protein match is: Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain (TAIR:AT3G44880.1); Has 5409 Blast hits to 5405 proteins in 897 species: Archae - 6; Bacteria - 3841; Metazoa - 59; Fungi - 58; Plants - 409; Viruses - 0; Other Eukaryotes - 1036 (source: NCBI BLink). & (gnl|cdd|58566 : 231.0) no description available & (q9zwm5|cao_chlre : 123.0) Chlorophyllide a oxygenase, chloroplast precursor (EC 1.13.12.14) (Chlorophyll a oxygenase) (Chlorophyll b synthase) - Chlamydomonas reinhardtii & (reliability: 1496.0) & (original description: Putative TIC55, Description = Protein TIC 55, chloroplastic, PFAM = PF00355;PF08417)' T '29.3.3' 'protein.targeting.chloroplast' 'nbv0.3scaffold74776_1097-7182' '(at4g02510 : 813.0) An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly.; translocon at the outer envelope membrane of chloroplasts 159 (TOC159); FUNCTIONS IN: transmembrane receptor activity, GTPase activity; INVOLVED IN: protein targeting to chloroplast; LOCATED IN: chloroplast outer membrane, cytosol, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chloroplast protein import component Toc86/159 (InterPro:IPR005690), AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: multimeric translocon complex in the outer envelope membrane 132 (TAIR:AT2G16640.1); Has 20720 Blast hits to 13966 proteins in 1613 species: Archae - 439; Bacteria - 5942; Metazoa - 6041; Fungi - 2379; Plants - 1534; Viruses - 151; Other Eukaryotes - 4234 (source: NCBI BLink). & (gnl|cdd|57945 : 304.0) no description available & (q41009|toc34_pea : 120.0) Translocase of chloroplast 34 (EC 3.6.5.-) (34 kDa chloroplast outer envelope protein) (GTP-binding protein OEP34) (GTP-binding protein IAP34) - Pisum sativum (Garden pea) & (reliability: 1626.0) & (original description: Putative PPI2, Description = Translocase of chloroplast 159, chloroplastic, PFAM = PF04548;PF11886)' T '29.3.3' 'protein.targeting.chloroplast' 'nbv0.3scaffold120685_1-2135' '(at1g21650 : 192.0) Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid. Loss-of-function mutations result in arrest at the globular stage and embryo lethality.; Preprotein translocase SecA family protein; FUNCTIONS IN: ATPase activity, zinc ion binding, P-P-bond-hydrolysis-driven protein transmembrane transporter activity, ATP binding; INVOLVED IN: intracellular protein transport, protein targeting, protein transport by the Sec complex, protein import; LOCATED IN: internal side of plasma membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type (InterPro:IPR001841), SecA, preprotein translocase (InterPro:IPR022491), WD40 repeat (InterPro:IPR001680), SecA motor DEAD (InterPro:IPR014018), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), SecA Wing/Scaffold (InterPro:IPR011116), WD40-repeat-containing domain (InterPro:IPR017986), SecA preprotein, cross-linking domain (InterPro:IPR011130), SecA DEAD-like (InterPro:IPR011115), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), SecA conserved site (InterPro:IPR020937), WD40 repeat, subgroup (InterPro:IPR019781), SecA protein (InterPro:IPR000185); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G21651.1). & (reliability: 384.0) & (original description: Putative secA, Description = Protein translocase subunit SecA, PFAM = )' T '29.3.3' 'protein.targeting.chloroplast' 'nbv0.5scaffold103_637587-643036' '(at2g15290 : 271.0) Encodes a protein located in the chloroplast inner envelope. The study of mutant defective in the gene product suggests that the protein is involved in the translocation of protein across the envelope membrane into the chloroplast stroma.; translocon at inner membrane of chloroplasts 21 (TIC21); FUNCTIONS IN: copper uptake transmembrane transporter activity, protein homodimerization activity, iron ion transmembrane transporter activity; INVOLVED IN: protein import into chloroplast stroma, cellular metal ion homeostasis; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope, Tic complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3611 (InterPro:IPR022051); Has 312 Blast hits to 312 proteins in 84 species: Archae - 0; Bacteria - 154; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 542.0) & (original description: Putative PIC1, Description = Permease in chloroplast, PFAM = PF12263)' T '29.3.3' 'protein.targeting.chloroplast' 'nbv0.5scaffold204_174730-189470' '(at5g16620 : 320.0) chloroplast protein import (Tic40); TIC40; INVOLVED IN: protein import into chloroplast stroma, chloroplast organization; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), 26S proteasome complex ubiquitin receptor, subunit Rpn13 (InterPro:IPR006773); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36522 : 160.0) no description available & (reliability: 640.0) & (original description: Putative TIC40, Description = Protein TIC 40, chloroplastic, PFAM = )' T '29.3.3' 'protein.targeting.chloroplast' 'nbv0.5scaffold572_57412-63798' '(at2g24820 : 746.0) translocon at the inner envelope membrane of chloroplasts 55-II (TIC55-II); FUNCTIONS IN: oxidoreductase activity, 2 iron, 2 sulfur cluster binding, chlorophyllide a oxygenase [overall] activity; INVOLVED IN: protein targeting to chloroplast; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Pheophorbide a oxygenase (InterPro:IPR013626); BEST Arabidopsis thaliana protein match is: Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain (TAIR:AT3G44880.1); Has 5409 Blast hits to 5405 proteins in 897 species: Archae - 6; Bacteria - 3841; Metazoa - 59; Fungi - 58; Plants - 409; Viruses - 0; Other Eukaryotes - 1036 (source: NCBI BLink). & (gnl|cdd|58566 : 231.0) no description available & (q9zwm5|cao_chlre : 123.0) Chlorophyllide a oxygenase, chloroplast precursor (EC 1.13.12.14) (Chlorophyll a oxygenase) (Chlorophyll b synthase) - Chlamydomonas reinhardtii & (reliability: 1492.0) & (original description: Putative TIC55, Description = Protein TIC 55, chloroplastic, PFAM = PF08417;PF00355)' T '29.3.3' 'protein.targeting.chloroplast' 'nbv0.5scaffold2363_198202-219833' '(at4g01800 : 1595.0) Encodes the ATPase subunit of the chloroplast Sec translocation machinery which plays an essential role in chloroplast biogenesis and the regulation of photosynthesis, the absence of which triggers a retrograde signal, eventually leading to a reprogramming of chloroplast and mitochondrial gene expression.; Albino or Glassy Yellow 1 (AGY1); FUNCTIONS IN: ATPase activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity, ATP binding; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SecA, preprotein translocase (InterPro:IPR022491), SecA motor DEAD (InterPro:IPR014018), SecA Wing/Scaffold (InterPro:IPR011116), SecA preprotein, cross-linking domain (InterPro:IPR011130), SecA DEAD-like (InterPro:IPR011115), SecA conserved site (InterPro:IPR020937), SecA protein (InterPro:IPR000185); BEST Arabidopsis thaliana protein match is: Preprotein translocase SecA family protein (TAIR:AT1G21650.1). & (q41062|seca_pea : 1554.0) Preprotein translocase secA subunit, chloroplast precursor - Pisum sativum (Garden pea) & (gnl|cdd|84387 : 1297.0) no description available & (reliability: 3190.0) & (original description: Putative SECA1, Description = Protein translocase subunit SECA1, chloroplastic, PFAM = PF01043;PF07516;PF07517)' T '29.3.3' 'protein.targeting.chloroplast' 'nbv0.5scaffold2927_1-16267' '(at2g15290 : 275.0) Encodes a protein located in the chloroplast inner envelope. The study of mutant defective in the gene product suggests that the protein is involved in the translocation of protein across the envelope membrane into the chloroplast stroma.; translocon at inner membrane of chloroplasts 21 (TIC21); FUNCTIONS IN: copper uptake transmembrane transporter activity, protein homodimerization activity, iron ion transmembrane transporter activity; INVOLVED IN: protein import into chloroplast stroma, cellular metal ion homeostasis; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope, Tic complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3611 (InterPro:IPR022051); Has 312 Blast hits to 312 proteins in 84 species: Archae - 0; Bacteria - 154; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 550.0) & (original description: Putative TIC21, Description = Protein TIC 21, chloroplastic, PFAM = PF12263)' T '29.3.3' 'protein.targeting.chloroplast' 'nbv0.5scaffold3197_136315-138958' '(at2g47840 : 173.0) Uncharacterised conserved protein ycf60; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein ycf60 (InterPro:IPR019109); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55710.1); Has 358 Blast hits to 358 proteins in 92 species: Archae - 0; Bacteria - 125; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative TIC20-II, Description = Protein TIC 20-II, chloroplastic, PFAM = PF16166)' T '29.3.3' 'protein.targeting.chloroplast' 'nbv0.5scaffold5335_77809-94385' '(at5g09420 : 700.0) translocon at the outer membrane of chloroplasts 64-V (TOC64-V); FUNCTIONS IN: amidase activity, binding, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: protein targeting to mitochondrion; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Amidase (InterPro:IPR000120), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: translocon at the outer membrane of chloroplasts 64-III (TAIR:AT3G17970.1); Has 28606 Blast hits to 25511 proteins in 2588 species: Archae - 476; Bacteria - 13320; Metazoa - 3833; Fungi - 2411; Plants - 1768; Viruses - 0; Other Eukaryotes - 6798 (source: NCBI BLink). & (gnl|cdd|76569 : 296.0) no description available & (gnl|cdd|36425 : 279.0) no description available & (reliability: 1400.0) & (original description: Putative OM64, Description = Outer envelope protein 64, mitochondrial, PFAM = PF01425;PF01425;PF00515)' T '29.3.3' 'protein.targeting.chloroplast' 'nbv0.5scaffold6014_69291-75503' '(at3g46740 : 1230.0) Component of the translocon outer membrane (TOC) complex. Forms the outer envelope translocation channel (beta-barrel). Plays a role in preprotein conductance. Imported into chloroplast. Expressed in young dividing photosynthetic tissues. Knockout mutants are embryo lethal with arrested development at the two-cell stage. Knockout mutants have abnormal etioplasts.; translocon at the outer envelope membrane of chloroplasts 75-III (TOC75-III); FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein targeting to chloroplast, chloroplast organization, embryonic morphogenesis; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial surface antigen (D15) (InterPro:IPR000184), Chloroplast envelope protein translocase, IAP75 (InterPro:IPR005689), Surface antigen variable number (InterPro:IPR010827); BEST Arabidopsis thaliana protein match is: Outer membrane OMP85 family protein (TAIR:AT4G09080.1); Has 4030 Blast hits to 1859 proteins in 343 species: Archae - 0; Bacteria - 806; Metazoa - 1937; Fungi - 82; Plants - 633; Viruses - 22; Other Eukaryotes - 550 (source: NCBI BLink). & (q43715|toc75_pea : 1169.0) Protein TOC75, chloroplast precursor (75 kDa translocon at the outer-envelope-membrane of chloroplasts) (Import intermediate associated protein of 75 kDa) (75 kDa chloroplast outer envelope protein) - Pisum sativum (Garden pea) & (gnl|cdd|85243 : 115.0) no description available & (reliability: 2460.0) & (original description: Putative IAP75, Description = Protein TOC75, chloroplastic, PFAM = PF01103)' T '29.3.3' 'protein.targeting.chloroplast' 'nbv0.5scaffold7093_76122-79076' '(at1g04940 : 342.0) Tic20 is believed to function as a component of the protein-conducting channel at the inner envelope membrane. Genes AT1G04940 and AT1G04945 were switched for the TAIR7 genome release to give consistency with MIPs annotation.; translocon at the inner envelope membrane of chloroplasts 20 (TIC20); CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein ycf60 (InterPro:IPR019109), Chloroplast protein import component Tic20 (InterPro:IPR005691); BEST Arabidopsis thaliana protein match is: HIT-type Zinc finger family protein (TAIR:AT1G04945.3); Has 279 Blast hits to 278 proteins in 76 species: Archae - 0; Bacteria - 100; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|88229 : 217.0) no description available & (reliability: 684.0) & (original description: Putative TIC20, Description = Protein TIC 20, chloroplastic, PFAM = PF16166)' T '29.3.3' 'protein.targeting.chloroplast' 'nbv0.5scaffold7929_19977-26062' '(at4g02510 : 848.0) An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly.; translocon at the outer envelope membrane of chloroplasts 159 (TOC159); FUNCTIONS IN: transmembrane receptor activity, GTPase activity; INVOLVED IN: protein targeting to chloroplast; LOCATED IN: chloroplast outer membrane, cytosol, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chloroplast protein import component Toc86/159 (InterPro:IPR005690), AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: multimeric translocon complex in the outer envelope membrane 132 (TAIR:AT2G16640.1); Has 20720 Blast hits to 13966 proteins in 1613 species: Archae - 439; Bacteria - 5942; Metazoa - 6041; Fungi - 2379; Plants - 1534; Viruses - 151; Other Eukaryotes - 4234 (source: NCBI BLink). & (gnl|cdd|57945 : 316.0) no description available & (q41009|toc34_pea : 125.0) Translocase of chloroplast 34 (EC 3.6.5.-) (34 kDa chloroplast outer envelope protein) (GTP-binding protein OEP34) (GTP-binding protein IAP34) - Pisum sativum (Garden pea) & (reliability: 1696.0) & (original description: Putative PPI2, Description = Translocase of chloroplast 159, chloroplastic, PFAM = PF11886;PF04548)' T '29.3.3' 'protein.targeting.chloroplast' 'nbv0.5scaffold8218_29759-42921' '(at5g52440 : 133.0) HCF106; nuclear gene for chloroplast. Thylakoid membrane delta pH translocation pathway component protein; related to Escherichia coli TatA and TatB; HIGH CHLOROPHYLL FLUORESCENCE 106 (HCF106); FUNCTIONS IN: proton motive force dependent protein transmembrane transporter activity; INVOLVED IN: protein import into chloroplast thylakoid membrane; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial sec-independent translocation protein mttA/Hcf106 (InterPro:IPR003369), Twin-arginine translocation protein TatA/E (InterPro:IPR006312); BEST Arabidopsis thaliana protein match is: Bacterial sec-independent translocation protein mttA/Hcf106 (TAIR:AT5G28750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative TATB, Description = Sec-independent protein translocase protein TATB, chloroplastic, PFAM = PF02416)' T '29.3.3' 'protein.targeting.chloroplast' 'nbv0.5scaffold9979_4699-7268' '(at2g47840 : 173.0) Uncharacterised conserved protein ycf60; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein ycf60 (InterPro:IPR019109); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55710.1); Has 358 Blast hits to 358 proteins in 92 species: Archae - 0; Bacteria - 125; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative TIC20-II, Description = Protein TIC 20-II, chloroplastic, PFAM = PF16166)' T '29.3.3' 'protein.targeting.chloroplast' 'niben044scf00000743ctg011_6202-12536' '(at2g24820 : 433.0) translocon at the inner envelope membrane of chloroplasts 55-II (TIC55-II); FUNCTIONS IN: oxidoreductase activity, 2 iron, 2 sulfur cluster binding, chlorophyllide a oxygenase [overall] activity; INVOLVED IN: protein targeting to chloroplast; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Pheophorbide a oxygenase (InterPro:IPR013626); BEST Arabidopsis thaliana protein match is: Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain (TAIR:AT3G44880.1); Has 5409 Blast hits to 5405 proteins in 897 species: Archae - 6; Bacteria - 3841; Metazoa - 59; Fungi - 58; Plants - 409; Viruses - 0; Other Eukaryotes - 1036 (source: NCBI BLink). & (gnl|cdd|58566 : 190.0) no description available & (q9zwm5|cao_chlre : 80.9) Chlorophyllide a oxygenase, chloroplast precursor (EC 1.13.12.14) (Chlorophyll a oxygenase) (Chlorophyll b synthase) - Chlamydomonas reinhardtii & (reliability: 866.0) & (original description: Putative BnaC03g26830D, Description = BnaC03g26830D protein, PFAM = PF08417;PF00355)' T '29.3.3' 'protein.targeting.chloroplast' 'niben044scf00001150ctg000_1404-8317' '(at5g52440 : 130.0) HCF106; nuclear gene for chloroplast. Thylakoid membrane delta pH translocation pathway component protein; related to Escherichia coli TatA and TatB; HIGH CHLOROPHYLL FLUORESCENCE 106 (HCF106); FUNCTIONS IN: proton motive force dependent protein transmembrane transporter activity; INVOLVED IN: protein import into chloroplast thylakoid membrane; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial sec-independent translocation protein mttA/Hcf106 (InterPro:IPR003369), Twin-arginine translocation protein TatA/E (InterPro:IPR006312); BEST Arabidopsis thaliana protein match is: Bacterial sec-independent translocation protein mttA/Hcf106 (TAIR:AT5G28750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative TATB, Description = Sec-independent protein translocase protein TATB, chloroplastic, PFAM = PF02416)' T '29.3.3' 'protein.targeting.chloroplast' 'niben044scf00001779ctg010_5122-7658' '(at5g09420 : 204.0) translocon at the outer membrane of chloroplasts 64-V (TOC64-V); FUNCTIONS IN: amidase activity, binding, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: protein targeting to mitochondrion; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Amidase (InterPro:IPR000120), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: translocon at the outer membrane of chloroplasts 64-III (TAIR:AT3G17970.1); Has 28606 Blast hits to 25511 proteins in 2588 species: Archae - 476; Bacteria - 13320; Metazoa - 3833; Fungi - 2411; Plants - 1768; Viruses - 0; Other Eukaryotes - 6798 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative OM64, Description = Outer envelope protein 64, mitochondrial, PFAM = )' T '29.3.3' 'protein.targeting.chloroplast' 'niben044scf00003355ctg008_1-8699' '(at3g23710 : 245.0) Tic22-like family protein; LOCATED IN: chloroplast, chloroplast inner membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tic22-like (InterPro:IPR007378); BEST Arabidopsis thaliana protein match is: Tic22-like family protein (TAIR:AT4G33350.1); Has 104 Blast hits to 104 proteins in 42 species: Archae - 0; Bacteria - 39; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|67874 : 209.0) no description available & (reliability: 490.0) & (original description: Putative Sb02g009350, Description = Putative uncharacterized protein Sb02g009350, PFAM = PF04278)' T '29.3.3' 'protein.targeting.chloroplast' 'niben044scf00005386ctg003_4516-11545' '(at2g45770 : 524.0) chloroplast SRP receptor homolog, alpha subunit CPFTSY. Required for LHCP integration into isolated thylakoids.; CPFTSY; FUNCTIONS IN: GTP binding; INVOLVED IN: protein import into chloroplast thylakoid membrane, protein targeting, thylakoid membrane organization, photosynthetic electron transport in photosystem II; LOCATED IN: chloroplast, signal recognition particle, endoplasmic reticulum targeting, chloroplast thylakoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal recognition particle, SRP54 subunit, helical bundle (InterPro:IPR013822), Signal recognition particle, SRP54 subunit, GTPase (InterPro:IPR000897), Cell division transporter substrate-binding protein FtsY (InterPro:IPR004390); BEST Arabidopsis thaliana protein match is: chloroplast signal recognition particle 54 kDa subunit (TAIR:AT5G03940.1). & (gnl|cdd|30898 : 330.0) no description available & (gnl|cdd|35999 : 302.0) no description available & (p49970|sr543_horvu : 120.0) Signal recognition particle 54 kDa protein 3 (SRP54) - Hordeum vulgare (Barley) & (reliability: 1048.0) & (original description: Putative CPFTSY, Description = Cell division protein FtsY homolog, chloroplastic, PFAM = PF00448;PF02881)' T '29.3.3' 'protein.targeting.chloroplast' 'niben044scf00005422ctg000_1834-5442' '(at3g24590 : 195.0) Encodes a signal peptidase Plsp1 (plastidic type I signal peptidase 1). Required for thylakoid development. Functions in the maturation of the 75-kD component of the translocon at the outer envelope membrane of chloroplasts and oxygen evolving complex subunit 33 (OE33).; plastidic type i signal peptidase 1 (PLSP1); FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis, thylakoid membrane organization, protein maturation; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, plastid envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (InterPro:IPR011056), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927), Peptidase S26A, signal peptidase I, conserved site (InterPro:IPR019758), Peptidase S26, conserved region (InterPro:IPR019533), Peptidase S26A, signal peptidase I (InterPro:IPR000223), Peptidase S26A, signal peptidase I, serine active site (InterPro:IPR019756); BEST Arabidopsis thaliana protein match is: Peptidase S24/S26A/S26B/S26C family protein (TAIR:AT1G06870.1); Has 9773 Blast hits to 9438 proteins in 2404 species: Archae - 0; Bacteria - 7280; Metazoa - 206; Fungi - 105; Plants - 230; Viruses - 0; Other Eukaryotes - 1952 (source: NCBI BLink). & (gnl|cdd|35392 : 92.0) no description available & (reliability: 390.0) & (original description: Putative lepB, Description = Signal peptidase I, PFAM = PF00717)' T '29.3.3' 'protein.targeting.chloroplast' 'niben044scf00008740ctg008_1-3479' '(at5g05000 : 360.0) Outer membrane GTPase protein that may function in import of nuclear encoded proteins into the chloroplast. Phosphorylation of the G-domains regulate translocon assembly.; translocon at the outer envelope membrane of chloroplasts 34 (TOC34); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: protein targeting to chloroplast, chloroplast localization; LOCATED IN: chloroplast outer membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703), Chloroplast protein import component Toc34 (InterPro:IPR005688); BEST Arabidopsis thaliana protein match is: translocon at the outer envelope membrane of chloroplasts 33 (TAIR:AT1G02280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41009|toc34_pea : 356.0) Translocase of chloroplast 34 (EC 3.6.5.-) (34 kDa chloroplast outer envelope protein) (GTP-binding protein OEP34) (GTP-binding protein IAP34) - Pisum sativum (Garden pea) & (gnl|cdd|57945 : 327.0) no description available & (reliability: 720.0) & (original description: Putative TOC34, Description = Translocase of chloroplast 34, chloroplastic, PFAM = PF04548)' T '29.3.3' 'protein.targeting.chloroplast' 'niben044scf00010062ctg005_10345-18791' '(at3g17970 : 718.0) Integral chloroplast outer membrane protein.; translocon at the outer membrane of chloroplasts 64-III (TOC64-III); FUNCTIONS IN: binding, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; LOCATED IN: integral to chloroplast outer membrane, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Amidase (InterPro:IPR000120), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: translocon at the outer membrane of chloroplasts 64-V (TAIR:AT5G09420.1); Has 32911 Blast hits to 27744 proteins in 2680 species: Archae - 530; Bacteria - 15888; Metazoa - 4120; Fungi - 2515; Plants - 2100; Viruses - 0; Other Eukaryotes - 7758 (source: NCBI BLink). & (gnl|cdd|76569 : 302.0) no description available & (gnl|cdd|36425 : 221.0) no description available & (reliability: 1436.0) & (original description: Putative TOC64, Description = Translocon at the outer membrane of chloroplasts 64, PFAM = PF07719;PF01425)' T '29.3.3' 'protein.targeting.chloroplast' 'niben044scf00010608ctg018_1-6509' '(at2g16640 : 999.0) multimeric translocon complex in the outer envelope membrane 132 (TOC132); FUNCTIONS IN: transmembrane receptor activity; INVOLVED IN: protein targeting to chloroplast; LOCATED IN: chloroplast outer membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chloroplast protein import component Toc86/159 (InterPro:IPR005690), AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: translocon outer complex protein 120 (TAIR:AT3G16620.1); Has 7054 Blast hits to 4909 proteins in 545 species: Archae - 31; Bacteria - 596; Metazoa - 2433; Fungi - 793; Plants - 579; Viruses - 84; Other Eukaryotes - 2538 (source: NCBI BLink). & (gnl|cdd|57945 : 385.0) no description available & (q41009|toc34_pea : 129.0) Translocase of chloroplast 34 (EC 3.6.5.-) (34 kDa chloroplast outer envelope protein) (GTP-binding protein OEP34) (GTP-binding protein IAP34) - Pisum sativum (Garden pea) & (reliability: 1998.0) & (original description: Putative TOC90, Description = Translocase of chloroplast 90, chloroplastic, PFAM = PF04548;PF11886)' T '29.3.3' 'protein.targeting.chloroplast' 'niben044scf00012992ctg001_4125-7176' '(at2g47840 : 176.0) Uncharacterised conserved protein ycf60; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein ycf60 (InterPro:IPR019109); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55710.1); Has 358 Blast hits to 358 proteins in 92 species: Archae - 0; Bacteria - 125; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative TIC20-II, Description = Protein TIC 20-II, chloroplastic, PFAM = PF16166)' T '29.3.3' 'protein.targeting.chloroplast' 'niben044scf00017610ctg020_1-10857' '(at5g16620 : 210.0) chloroplast protein import (Tic40); TIC40; INVOLVED IN: protein import into chloroplast stroma, chloroplast organization; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), 26S proteasome complex ubiquitin receptor, subunit Rpn13 (InterPro:IPR006773); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36522 : 90.1) no description available & (reliability: 420.0) & (original description: Putative TIC40, Description = Protein TIC 40, chloroplastic, PFAM = )' T '29.3.3' 'protein.targeting.chloroplast' 'niben044scf00023066ctg012_1-3405' '(at1g04940 : 340.0) Tic20 is believed to function as a component of the protein-conducting channel at the inner envelope membrane. Genes AT1G04940 and AT1G04945 were switched for the TAIR7 genome release to give consistency with MIPs annotation.; translocon at the inner envelope membrane of chloroplasts 20 (TIC20); CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein ycf60 (InterPro:IPR019109), Chloroplast protein import component Tic20 (InterPro:IPR005691); BEST Arabidopsis thaliana protein match is: HIT-type Zinc finger family protein (TAIR:AT1G04945.3); Has 279 Blast hits to 278 proteins in 76 species: Archae - 0; Bacteria - 100; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|88229 : 223.0) no description available & (reliability: 680.0) & (original description: Putative IAP21, Description = Tic20-like protein, PFAM = PF16166)' T '29.3.3' 'protein.targeting.chloroplast' 'niben044scf00039008ctg003_1-3088' '(at1g24490 : 128.0) Homologue of the Alb3/Oxa1/YidC family. ALB4 is almost identical to the Alb3/Oxa1/YidC domain of the previously described 110 kDa inner envelope protein ARTEMIS. However, ALB4 is expressed as a separate 55 kDa protein and is located in the thylakoid membrane of chloroplasts. Analysis of a T-DNA insertion line with a reduced level of Alb4 revealed chloroplasts with an altered ultrastructure. Mutant plastids are larger, more spherical in appearance and the grana stacks within the mutant lines are less appressed than in the wild-type chloroplasts. ALB4 is required for proper chloroplast biogenesis.; ALBINA 4 (ALB4); CONTAINS InterPro DOMAIN/s: Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Membrane insertion protein, OxaA/YidC, core (InterPro:IPR020001); BEST Arabidopsis thaliana protein match is: 63 kDa inner membrane family protein (TAIR:AT2G28800.1); Has 8058 Blast hits to 8029 proteins in 2465 species: Archae - 0; Bacteria - 5573; Metazoa - 87; Fungi - 22; Plants - 115; Viruses - 0; Other Eukaryotes - 2261 (source: NCBI BLink). & (q9fy06|ppf1_pea : 127.0) Inner membrane protein PPF-1, chloroplast precursor (Post-floral-specific protein 1) - Pisum sativum (Garden pea) & (gnl|cdd|65847 : 82.6) no description available & (reliability: 246.0) & (original description: Putative ALB, Description = ALBINO3-like protein 1, chloroplastic, PFAM = PF02096)' T '29.3.3' 'protein.targeting.chloroplast' 'niben044scf00060831ctg000_1-6889' '(at2g18710 : 715.0) Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid.; SECY homolog 1 (SCY1); FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein secretion, protein transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SecY protein (InterPro:IPR002208); BEST Arabidopsis thaliana protein match is: SecY protein transport family protein (TAIR:AT2G31530.1); Has 9180 Blast hits to 9165 proteins in 2700 species: Archae - 72; Bacteria - 5385; Metazoa - 19; Fungi - 2; Plants - 102; Viruses - 0; Other Eukaryotes - 3600 (source: NCBI BLink). & (p93690|secy_spiol : 702.0) Preprotein translocase secY subunit, chloroplast precursor (CpSecY) - Spinacia oleracea (Spinach) & (gnl|cdd|82857 : 372.0) no description available & (reliability: 1430.0) & (original description: Putative SCY1, Description = Preprotein translocase subunit SCY1, chloroplastic, PFAM = PF00344)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf00110_533905-558712' '(at4g01800 : 1600.0) Encodes the ATPase subunit of the chloroplast Sec translocation machinery which plays an essential role in chloroplast biogenesis and the regulation of photosynthesis, the absence of which triggers a retrograde signal, eventually leading to a reprogramming of chloroplast and mitochondrial gene expression.; Albino or Glassy Yellow 1 (AGY1); FUNCTIONS IN: ATPase activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity, ATP binding; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SecA, preprotein translocase (InterPro:IPR022491), SecA motor DEAD (InterPro:IPR014018), SecA Wing/Scaffold (InterPro:IPR011116), SecA preprotein, cross-linking domain (InterPro:IPR011130), SecA DEAD-like (InterPro:IPR011115), SecA conserved site (InterPro:IPR020937), SecA protein (InterPro:IPR000185); BEST Arabidopsis thaliana protein match is: Preprotein translocase SecA family protein (TAIR:AT1G21650.1). & (q41062|seca_pea : 1559.0) Preprotein translocase secA subunit, chloroplast precursor - Pisum sativum (Garden pea) & (gnl|cdd|84387 : 1297.0) no description available & (reliability: 3200.0) & (original description: Putative SECA1, Description = Protein translocase subunit SECA1, chloroplastic, PFAM = PF01043;PF07516;PF07517)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf00119_224200-233898' '(q9fy06|ppf1_pea : 581.0) Inner membrane protein PPF-1, chloroplast precursor (Post-floral-specific protein 1) - Pisum sativum (Garden pea) & (at2g28800 : 542.0) member of Chloroplast membrane protein ALBINO3 family. Similar to pea PPF1 and may play a role in plant senescence.; ALBINO 3 (ALB3); CONTAINS InterPro DOMAIN/s: Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Membrane insertion protein, OxaA/YidC, core (InterPro:IPR020001); BEST Arabidopsis thaliana protein match is: OxaA/YidC-like membrane insertion protein (TAIR:AT1G24490.1). & (gnl|cdd|65847 : 214.0) no description available & (gnl|cdd|36453 : 192.0) no description available & (reliability: 1084.0) & (original description: Putative ALB, Description = ALBINO3-like protein 1, chloroplastic, PFAM = PF02096)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf00430_125762-160532' '(at1g21650 : 2223.0) Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid. Loss-of-function mutations result in arrest at the globular stage and embryo lethality.; Preprotein translocase SecA family protein; FUNCTIONS IN: ATPase activity, zinc ion binding, P-P-bond-hydrolysis-driven protein transmembrane transporter activity, ATP binding; INVOLVED IN: intracellular protein transport, protein targeting, protein transport by the Sec complex, protein import; LOCATED IN: internal side of plasma membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type (InterPro:IPR001841), SecA, preprotein translocase (InterPro:IPR022491), WD40 repeat (InterPro:IPR001680), SecA motor DEAD (InterPro:IPR014018), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), SecA Wing/Scaffold (InterPro:IPR011116), WD40-repeat-containing domain (InterPro:IPR017986), SecA preprotein, cross-linking domain (InterPro:IPR011130), SecA DEAD-like (InterPro:IPR011115), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), SecA conserved site (InterPro:IPR020937), WD40 repeat, subgroup (InterPro:IPR019781), SecA protein (InterPro:IPR000185); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G21651.1). & (gnl|cdd|84387 : 838.0) no description available & (q36795|seca_spiol : 698.0) Preprotein translocase secA subunit, chloroplast precursor - Spinacia oleracea (Spinach) & (gnl|cdd|35495 : 107.0) no description available & (reliability: 4446.0) & (original description: Putative SECA2, Description = Protein translocase subunit SECA2, chloroplastic, PFAM = PF07516;PF01043;PF07517;PF00400)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf00430_141744-151232' '(at1g21650 : 742.0) Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid. Loss-of-function mutations result in arrest at the globular stage and embryo lethality.; Preprotein translocase SecA family protein; FUNCTIONS IN: ATPase activity, zinc ion binding, P-P-bond-hydrolysis-driven protein transmembrane transporter activity, ATP binding; INVOLVED IN: intracellular protein transport, protein targeting, protein transport by the Sec complex, protein import; LOCATED IN: internal side of plasma membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type (InterPro:IPR001841), SecA, preprotein translocase (InterPro:IPR022491), WD40 repeat (InterPro:IPR001680), SecA motor DEAD (InterPro:IPR014018), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), SecA Wing/Scaffold (InterPro:IPR011116), WD40-repeat-containing domain (InterPro:IPR017986), SecA preprotein, cross-linking domain (InterPro:IPR011130), SecA DEAD-like (InterPro:IPR011115), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), SecA conserved site (InterPro:IPR020937), WD40 repeat, subgroup (InterPro:IPR019781), SecA protein (InterPro:IPR000185); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G21651.1). & (gnl|cdd|87292 : 586.0) no description available & (q41062|seca_pea : 453.0) Preprotein translocase secA subunit, chloroplast precursor - Pisum sativum (Garden pea) & (reliability: 1484.0) & (original description: Putative secA, Description = Protein translocase subunit SecA, PFAM = PF07517;PF01043)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf00454_665240-669946' '(at5g05000 : 392.0) Outer membrane GTPase protein that may function in import of nuclear encoded proteins into the chloroplast. Phosphorylation of the G-domains regulate translocon assembly.; translocon at the outer envelope membrane of chloroplasts 34 (TOC34); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: protein targeting to chloroplast, chloroplast localization; LOCATED IN: chloroplast outer membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703), Chloroplast protein import component Toc34 (InterPro:IPR005688); BEST Arabidopsis thaliana protein match is: translocon at the outer envelope membrane of chloroplasts 33 (TAIR:AT1G02280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41009|toc34_pea : 384.0) Translocase of chloroplast 34 (EC 3.6.5.-) (34 kDa chloroplast outer envelope protein) (GTP-binding protein OEP34) (GTP-binding protein IAP34) - Pisum sativum (Garden pea) & (gnl|cdd|57945 : 331.0) no description available & (reliability: 784.0) & (original description: Putative TOC34, Description = Translocase of chloroplast 34, chloroplastic, PFAM = PF04548)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf00595_50155-64628' '(at5g52440 : 129.0) HCF106; nuclear gene for chloroplast. Thylakoid membrane delta pH translocation pathway component protein; related to Escherichia coli TatA and TatB; HIGH CHLOROPHYLL FLUORESCENCE 106 (HCF106); FUNCTIONS IN: proton motive force dependent protein transmembrane transporter activity; INVOLVED IN: protein import into chloroplast thylakoid membrane; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial sec-independent translocation protein mttA/Hcf106 (InterPro:IPR003369), Twin-arginine translocation protein TatA/E (InterPro:IPR006312); BEST Arabidopsis thaliana protein match is: Bacterial sec-independent translocation protein mttA/Hcf106 (TAIR:AT5G28750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative TATB, Description = Sec-independent protein translocase protein TATB, chloroplastic, PFAM = PF02416)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf01487_529911-534695' '(at1g06870 : 382.0) Peptidase S24/S26A/S26B/S26C family protein; FUNCTIONS IN: serine-type peptidase activity, peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (InterPro:IPR011056), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927), Peptidase S26A, signal peptidase I, conserved site (InterPro:IPR019758), Peptidase S26, conserved region (InterPro:IPR019533), Peptidase S26A, signal peptidase I (InterPro:IPR000223), Peptidase S26A, signal peptidase I, serine active site (InterPro:IPR019756); BEST Arabidopsis thaliana protein match is: thylakoid processing peptide (TAIR:AT2G30440.1); Has 9578 Blast hits to 9341 proteins in 2371 species: Archae - 0; Bacteria - 7160; Metazoa - 214; Fungi - 105; Plants - 244; Viruses - 0; Other Eukaryotes - 1855 (source: NCBI BLink). & (gnl|cdd|35392 : 169.0) no description available & (reliability: 726.0) & (original description: Putative TPP2, Description = Probable thylakoidal processing peptidase 2, chloroplastic, PFAM = PF10502)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf01721_709670-715952' '(at2g24820 : 754.0) translocon at the inner envelope membrane of chloroplasts 55-II (TIC55-II); FUNCTIONS IN: oxidoreductase activity, 2 iron, 2 sulfur cluster binding, chlorophyllide a oxygenase [overall] activity; INVOLVED IN: protein targeting to chloroplast; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Pheophorbide a oxygenase (InterPro:IPR013626); BEST Arabidopsis thaliana protein match is: Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain (TAIR:AT3G44880.1); Has 5409 Blast hits to 5405 proteins in 897 species: Archae - 6; Bacteria - 3841; Metazoa - 59; Fungi - 58; Plants - 409; Viruses - 0; Other Eukaryotes - 1036 (source: NCBI BLink). & (gnl|cdd|58566 : 229.0) no description available & (q9zwm5|cao_chlre : 127.0) Chlorophyllide a oxygenase, chloroplast precursor (EC 1.13.12.14) (Chlorophyll a oxygenase) (Chlorophyll b synthase) - Chlamydomonas reinhardtii & (reliability: 1508.0) & (original description: Putative TIC55, Description = Protein TIC 55, chloroplastic, PFAM = PF08417;PF00355)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf01847_716593-722762' '(at2g16640 : 1007.0) multimeric translocon complex in the outer envelope membrane 132 (TOC132); FUNCTIONS IN: transmembrane receptor activity; INVOLVED IN: protein targeting to chloroplast; LOCATED IN: chloroplast outer membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chloroplast protein import component Toc86/159 (InterPro:IPR005690), AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: translocon outer complex protein 120 (TAIR:AT3G16620.1); Has 7054 Blast hits to 4909 proteins in 545 species: Archae - 31; Bacteria - 596; Metazoa - 2433; Fungi - 793; Plants - 579; Viruses - 84; Other Eukaryotes - 2538 (source: NCBI BLink). & (gnl|cdd|57945 : 384.0) no description available & (q41009|toc34_pea : 131.0) Translocase of chloroplast 34 (EC 3.6.5.-) (34 kDa chloroplast outer envelope protein) (GTP-binding protein OEP34) (GTP-binding protein IAP34) - Pisum sativum (Garden pea) & (reliability: 2014.0) & (original description: Putative TOC90, Description = Translocase of chloroplast 90, chloroplastic, PFAM = PF04548;PF11886)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf01888_247982-266088' '(at1g21650 : 619.0) Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid. Loss-of-function mutations result in arrest at the globular stage and embryo lethality.; Preprotein translocase SecA family protein; FUNCTIONS IN: ATPase activity, zinc ion binding, P-P-bond-hydrolysis-driven protein transmembrane transporter activity, ATP binding; INVOLVED IN: intracellular protein transport, protein targeting, protein transport by the Sec complex, protein import; LOCATED IN: internal side of plasma membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type (InterPro:IPR001841), SecA, preprotein translocase (InterPro:IPR022491), WD40 repeat (InterPro:IPR001680), SecA motor DEAD (InterPro:IPR014018), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), SecA Wing/Scaffold (InterPro:IPR011116), WD40-repeat-containing domain (InterPro:IPR017986), SecA preprotein, cross-linking domain (InterPro:IPR011130), SecA DEAD-like (InterPro:IPR011115), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), SecA conserved site (InterPro:IPR020937), WD40 repeat, subgroup (InterPro:IPR019781), SecA protein (InterPro:IPR000185); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G21651.1). & (gnl|cdd|29257 : 117.0) no description available & (gnl|cdd|35495 : 108.0) no description available & (reliability: 1238.0) & (original description: Putative BnaC05g16940D, Description = BnaC05g16940D protein, PFAM = PF00400;PF00400;PF13445)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf02062_956570-969209' '(at5g19620 : 914.0) AtOEP80 is paralog to the chloroplastic protein translocation channel Toc75. Mutations in this locus result in embryo lethality.; outer envelope protein of 80 kDa (OEP80); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast, plastid, membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial surface antigen (D15) (InterPro:IPR000184), Surface antigen variable number (InterPro:IPR010827); BEST Arabidopsis thaliana protein match is: Outer membrane OMP85 family protein (TAIR:AT3G44160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34388 : 186.0) no description available & (q43715|toc75_pea : 117.0) Protein TOC75, chloroplast precursor (75 kDa translocon at the outer-envelope-membrane of chloroplasts) (Import intermediate associated protein of 75 kDa) (75 kDa chloroplast outer envelope protein) - Pisum sativum (Garden pea) & (reliability: 1828.0) & (original description: Putative OEP80, Description = Outer envelope protein 80, chloroplastic, PFAM = PF01103)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf02062_958382-962975' '(at5g19620 : 166.0) AtOEP80 is paralog to the chloroplastic protein translocation channel Toc75. Mutations in this locus result in embryo lethality.; outer envelope protein of 80 kDa (OEP80); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast, plastid, membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial surface antigen (D15) (InterPro:IPR000184), Surface antigen variable number (InterPro:IPR010827); BEST Arabidopsis thaliana protein match is: Outer membrane OMP85 family protein (TAIR:AT3G44160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative OEP75, Description = Outer envelope protein 80, chloroplastic, PFAM = PF07244)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf02133_87026-103945' '(at5g09420 : 677.0) translocon at the outer membrane of chloroplasts 64-V (TOC64-V); FUNCTIONS IN: amidase activity, binding, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: protein targeting to mitochondrion; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Amidase (InterPro:IPR000120), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: translocon at the outer membrane of chloroplasts 64-III (TAIR:AT3G17970.1); Has 28606 Blast hits to 25511 proteins in 2588 species: Archae - 476; Bacteria - 13320; Metazoa - 3833; Fungi - 2411; Plants - 1768; Viruses - 0; Other Eukaryotes - 6798 (source: NCBI BLink). & (gnl|cdd|36425 : 270.0) no description available & (gnl|cdd|76569 : 269.0) no description available & (reliability: 1354.0) & (original description: Putative OM64, Description = Outer envelope protein 64, mitochondrial, PFAM = PF00515;PF01425)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf02949_11154-18237' '(at1g24490 : 437.0) Homologue of the Alb3/Oxa1/YidC family. ALB4 is almost identical to the Alb3/Oxa1/YidC domain of the previously described 110 kDa inner envelope protein ARTEMIS. However, ALB4 is expressed as a separate 55 kDa protein and is located in the thylakoid membrane of chloroplasts. Analysis of a T-DNA insertion line with a reduced level of Alb4 revealed chloroplasts with an altered ultrastructure. Mutant plastids are larger, more spherical in appearance and the grana stacks within the mutant lines are less appressed than in the wild-type chloroplasts. ALB4 is required for proper chloroplast biogenesis.; ALBINA 4 (ALB4); CONTAINS InterPro DOMAIN/s: Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Membrane insertion protein, OxaA/YidC, core (InterPro:IPR020001); BEST Arabidopsis thaliana protein match is: 63 kDa inner membrane family protein (TAIR:AT2G28800.1); Has 8058 Blast hits to 8029 proteins in 2465 species: Archae - 0; Bacteria - 5573; Metazoa - 87; Fungi - 22; Plants - 115; Viruses - 0; Other Eukaryotes - 2261 (source: NCBI BLink). & (q9fy06|ppf1_pea : 398.0) Inner membrane protein PPF-1, chloroplast precursor (Post-floral-specific protein 1) - Pisum sativum (Garden pea) & (gnl|cdd|65847 : 206.0) no description available & (gnl|cdd|36453 : 180.0) no description available & (reliability: 818.0) & (original description: Putative ALB3L1, Description = ALBINO3-like protein 1, chloroplastic, PFAM = PF02096)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf03648_227831-235177' '(at4g02510 : 964.0) An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly.; translocon at the outer envelope membrane of chloroplasts 159 (TOC159); FUNCTIONS IN: transmembrane receptor activity, GTPase activity; INVOLVED IN: protein targeting to chloroplast; LOCATED IN: chloroplast outer membrane, cytosol, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chloroplast protein import component Toc86/159 (InterPro:IPR005690), AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: multimeric translocon complex in the outer envelope membrane 132 (TAIR:AT2G16640.1); Has 20720 Blast hits to 13966 proteins in 1613 species: Archae - 439; Bacteria - 5942; Metazoa - 6041; Fungi - 2379; Plants - 1534; Viruses - 151; Other Eukaryotes - 4234 (source: NCBI BLink). & (gnl|cdd|57945 : 356.0) no description available & (q41009|toc34_pea : 111.0) Translocase of chloroplast 34 (EC 3.6.5.-) (34 kDa chloroplast outer envelope protein) (GTP-binding protein OEP34) (GTP-binding protein IAP34) - Pisum sativum (Garden pea) & (reliability: 1928.0) & (original description: Putative IAP86, Description = GTP-binding protein, PFAM = PF04548;PF11886)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf03857_170396-176481' '(at4g02510 : 850.0) An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly.; translocon at the outer envelope membrane of chloroplasts 159 (TOC159); FUNCTIONS IN: transmembrane receptor activity, GTPase activity; INVOLVED IN: protein targeting to chloroplast; LOCATED IN: chloroplast outer membrane, cytosol, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chloroplast protein import component Toc86/159 (InterPro:IPR005690), AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: multimeric translocon complex in the outer envelope membrane 132 (TAIR:AT2G16640.1); Has 20720 Blast hits to 13966 proteins in 1613 species: Archae - 439; Bacteria - 5942; Metazoa - 6041; Fungi - 2379; Plants - 1534; Viruses - 151; Other Eukaryotes - 4234 (source: NCBI BLink). & (gnl|cdd|57945 : 314.0) no description available & (q41009|toc34_pea : 125.0) Translocase of chloroplast 34 (EC 3.6.5.-) (34 kDa chloroplast outer envelope protein) (GTP-binding protein OEP34) (GTP-binding protein IAP34) - Pisum sativum (Garden pea) & (reliability: 1700.0) & (original description: Putative IAP86, Description = GTP-binding protein, PFAM = PF11886;PF04548)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf04024_204908-211526' '(at2g01110 : 395.0) mutant is Albino and pale green; Chloroplast Protein Translocation (tatC). Core subunit of the chloroplast Tat translocase. Integral chloroplast thylakoid membrane protein.; ALBINO AND PALE GREEN 2 (APG2); FUNCTIONS IN: proton motive force dependent protein transmembrane transporter activity; INVOLVED IN: thylakoid membrane organization, double fertilization forming a zygote and endosperm; LOCATED IN: chloroplast thylakoid membrane, receptor complex, chloroplast, integral to thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec-independent periplasmic protein translocase (InterPro:IPR002033), Sec-independent periplasmic protein translocase, conserved site (InterPro:IPR019820), Twin arginine-targeting protein translocase, TatC (InterPro:IPR019822); Has 5953 Blast hits to 5918 proteins in 1859 species: Archae - 177; Bacteria - 3492; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 2203 (source: NCBI BLink). & (gnl|cdd|31148 : 205.0) no description available & (reliability: 790.0) & (original description: Putative TATC, Description = Sec-independent protein translocase protein TATC, chloroplastic, PFAM = PF00902)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf04223_235934-242103' '(at3g16620 : 1027.0) component of TOC complex, plastid protein import machinery.; translocon outer complex protein 120 (TOC120); FUNCTIONS IN: GTP binding; INVOLVED IN: protein targeting to chloroplast; LOCATED IN: chloroplast outer membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chloroplast protein import component Toc86/159 (InterPro:IPR005690), AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: multimeric translocon complex in the outer envelope membrane 132 (TAIR:AT2G16640.1); Has 2198 Blast hits to 1948 proteins in 385 species: Archae - 12; Bacteria - 407; Metazoa - 712; Fungi - 212; Plants - 332; Viruses - 5; Other Eukaryotes - 518 (source: NCBI BLink). & (gnl|cdd|57945 : 385.0) no description available & (q41009|toc34_pea : 129.0) Translocase of chloroplast 34 (EC 3.6.5.-) (34 kDa chloroplast outer envelope protein) (GTP-binding protein OEP34) (GTP-binding protein IAP34) - Pisum sativum (Garden pea) & (reliability: 2054.0) & (original description: Putative TOC90, Description = Translocase of chloroplast 90, chloroplastic, PFAM = PF04548;PF11886)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf04329_632215-641532' '(at5g03940 : 818.0) mutant has Yellow first leaves; Chloroplast Signal Recognition Particle Subunit; chloroplast signal recognition particle 54 kDa subunit (CPSRP54); FUNCTIONS IN: 7S RNA binding, protein binding, mRNA binding, GTP binding, signal sequence binding; INVOLVED IN: protein import into chloroplast thylakoid membrane, SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition; LOCATED IN: chloroplast stroma, chloroplast, signal recognition particle, chloroplast targeting, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Signal recognition particle, SRP (InterPro:IPR004780), Signal recognition particle, SRP54 subunit, helical bundle (InterPro:IPR013822), Signal recognition particle, SRP54 subunit, M-domain (InterPro:IPR004125), Signal recognition particle, SRP54 subunit, GTPase (InterPro:IPR000897); BEST Arabidopsis thaliana protein match is: Signal recognition particle, SRP54 subunit protein (TAIR:AT1G48900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30887 : 523.0) no description available & (gnl|cdd|35999 : 502.0) no description available & (p49968|sr541_horvu : 191.0) Signal recognition particle 54 kDa protein 1 (SRP54) - Hordeum vulgare (Barley) & (reliability: 1636.0) & (original description: Putative FFC, Description = Signal recognition particle 54 kDa protein, chloroplastic, PFAM = PF00448;PF02978;PF02881)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf04926_607294-612135' '(at5g05000 : 416.0) Outer membrane GTPase protein that may function in import of nuclear encoded proteins into the chloroplast. Phosphorylation of the G-domains regulate translocon assembly.; translocon at the outer envelope membrane of chloroplasts 34 (TOC34); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: protein targeting to chloroplast, chloroplast localization; LOCATED IN: chloroplast outer membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703), Chloroplast protein import component Toc34 (InterPro:IPR005688); BEST Arabidopsis thaliana protein match is: translocon at the outer envelope membrane of chloroplasts 33 (TAIR:AT1G02280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41009|toc34_pea : 416.0) Translocase of chloroplast 34 (EC 3.6.5.-) (34 kDa chloroplast outer envelope protein) (GTP-binding protein OEP34) (GTP-binding protein IAP34) - Pisum sativum (Garden pea) & (gnl|cdd|57945 : 354.0) no description available & (reliability: 832.0) & (original description: Putative TOC34, Description = Translocase of chloroplast 34, PFAM = PF04548)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf05395_127111-141173' '(at1g06950 : 1164.0) Encodes a protein thought to be a part of the translocon at the chloroplast inner envelope. Involved in protein import into the chloroplast and chloroplast biogenesis.; translocon at the inner envelope membrane of chloroplasts 110 (TIC110); INVOLVED IN: protein import into chloroplast stroma, chloroplast organization; LOCATED IN: chloroplast, membrane, chloroplast envelope, Tic complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 131 Blast hits to 118 proteins in 52 species: Archae - 4; Bacteria - 6; Metazoa - 16; Fungi - 9; Plants - 66; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 2328.0) & (original description: Putative IEP110, Description = Chloroplast inner envelope protein, PFAM = PF16940;PF16940)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf06044_1842-7025' '(at3g24590 : 346.0) Encodes a signal peptidase Plsp1 (plastidic type I signal peptidase 1). Required for thylakoid development. Functions in the maturation of the 75-kD component of the translocon at the outer envelope membrane of chloroplasts and oxygen evolving complex subunit 33 (OE33).; plastidic type i signal peptidase 1 (PLSP1); FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis, thylakoid membrane organization, protein maturation; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, plastid envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (InterPro:IPR011056), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927), Peptidase S26A, signal peptidase I, conserved site (InterPro:IPR019758), Peptidase S26, conserved region (InterPro:IPR019533), Peptidase S26A, signal peptidase I (InterPro:IPR000223), Peptidase S26A, signal peptidase I, serine active site (InterPro:IPR019756); BEST Arabidopsis thaliana protein match is: Peptidase S24/S26A/S26B/S26C family protein (TAIR:AT1G06870.1); Has 9773 Blast hits to 9438 proteins in 2404 species: Archae - 0; Bacteria - 7280; Metazoa - 206; Fungi - 105; Plants - 230; Viruses - 0; Other Eukaryotes - 1952 (source: NCBI BLink). & (gnl|cdd|35392 : 178.0) no description available & (reliability: 692.0) & (original description: Putative PLSP1, Description = Chloroplast processing peptidase, PFAM = PF10502)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf06044_2041-7313' '(at3g24590 : 245.0) Encodes a signal peptidase Plsp1 (plastidic type I signal peptidase 1). Required for thylakoid development. Functions in the maturation of the 75-kD component of the translocon at the outer envelope membrane of chloroplasts and oxygen evolving complex subunit 33 (OE33).; plastidic type i signal peptidase 1 (PLSP1); FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis, thylakoid membrane organization, protein maturation; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, plastid envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (InterPro:IPR011056), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927), Peptidase S26A, signal peptidase I, conserved site (InterPro:IPR019758), Peptidase S26, conserved region (InterPro:IPR019533), Peptidase S26A, signal peptidase I (InterPro:IPR000223), Peptidase S26A, signal peptidase I, serine active site (InterPro:IPR019756); BEST Arabidopsis thaliana protein match is: Peptidase S24/S26A/S26B/S26C family protein (TAIR:AT1G06870.1); Has 9773 Blast hits to 9438 proteins in 2404 species: Archae - 0; Bacteria - 7280; Metazoa - 206; Fungi - 105; Plants - 230; Viruses - 0; Other Eukaryotes - 1952 (source: NCBI BLink). & (gnl|cdd|35392 : 139.0) no description available & (reliability: 490.0) & (original description: Putative lepB, Description = Signal peptidase I, PFAM = PF10502)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf06186_303351-310168' '(at5g52440 : 135.0) HCF106; nuclear gene for chloroplast. Thylakoid membrane delta pH translocation pathway component protein; related to Escherichia coli TatA and TatB; HIGH CHLOROPHYLL FLUORESCENCE 106 (HCF106); FUNCTIONS IN: proton motive force dependent protein transmembrane transporter activity; INVOLVED IN: protein import into chloroplast thylakoid membrane; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial sec-independent translocation protein mttA/Hcf106 (InterPro:IPR003369), Twin-arginine translocation protein TatA/E (InterPro:IPR006312); BEST Arabidopsis thaliana protein match is: Bacterial sec-independent translocation protein mttA/Hcf106 (TAIR:AT5G28750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative TATB, Description = Sec-independent protein translocase protein TATB, chloroplastic, PFAM = PF02416)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf06776_88311-94541' '(at4g02510 : 829.0) An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly.; translocon at the outer envelope membrane of chloroplasts 159 (TOC159); FUNCTIONS IN: transmembrane receptor activity, GTPase activity; INVOLVED IN: protein targeting to chloroplast; LOCATED IN: chloroplast outer membrane, cytosol, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chloroplast protein import component Toc86/159 (InterPro:IPR005690), AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: multimeric translocon complex in the outer envelope membrane 132 (TAIR:AT2G16640.1); Has 20720 Blast hits to 13966 proteins in 1613 species: Archae - 439; Bacteria - 5942; Metazoa - 6041; Fungi - 2379; Plants - 1534; Viruses - 151; Other Eukaryotes - 4234 (source: NCBI BLink). & (gnl|cdd|57945 : 306.0) no description available & (q41009|toc34_pea : 124.0) Translocase of chloroplast 34 (EC 3.6.5.-) (34 kDa chloroplast outer envelope protein) (GTP-binding protein OEP34) (GTP-binding protein IAP34) - Pisum sativum (Garden pea) & (reliability: 1658.0) & (original description: Putative PPI2, Description = Translocase of chloroplast 159, chloroplastic, PFAM = PF11886;PF04548)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf07377_35151-48683' '(at3g20320 : 512.0) Encodes a permease-like component of an ABC transporter involved in lipid transfer from ER to chloroplast. A phosphatidic acid-binding protein with a predicted mycobacterial cell entry domain. It is tethered to the inner chloroplast envelope membrane facing the outer envelope membrane. Presumed bacterial orthologs of TGD1 and TGD2 in Gram-negative bacteria are typically organized in transcriptional units, suggesting their involvement in a common biological process. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.; trigalactosyldiacylglycerol2 (TGD2); FUNCTIONS IN: phospholipid binding, lipid transporter activity; INVOLVED IN: lipid transport; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mammalian cell entry related (InterPro:IPR003399); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1024.0) & (original description: Putative TGD2, Description = Protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic, PFAM = PF02470)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf07639_53537-76439' '(at1g06950 : 1184.0) Encodes a protein thought to be a part of the translocon at the chloroplast inner envelope. Involved in protein import into the chloroplast and chloroplast biogenesis.; translocon at the inner envelope membrane of chloroplasts 110 (TIC110); INVOLVED IN: protein import into chloroplast stroma, chloroplast organization; LOCATED IN: chloroplast, membrane, chloroplast envelope, Tic complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 131 Blast hits to 118 proteins in 52 species: Archae - 4; Bacteria - 6; Metazoa - 16; Fungi - 9; Plants - 66; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 2368.0) & (original description: Putative BnaC01g18730D, Description = BnaC01g18730D protein, PFAM = PF16940;PF16940)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf08134_250479-256460' '(at2g15290 : 271.0) Encodes a protein located in the chloroplast inner envelope. The study of mutant defective in the gene product suggests that the protein is involved in the translocation of protein across the envelope membrane into the chloroplast stroma.; translocon at inner membrane of chloroplasts 21 (TIC21); FUNCTIONS IN: copper uptake transmembrane transporter activity, protein homodimerization activity, iron ion transmembrane transporter activity; INVOLVED IN: protein import into chloroplast stroma, cellular metal ion homeostasis; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope, Tic complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3611 (InterPro:IPR022051); Has 312 Blast hits to 312 proteins in 84 species: Archae - 0; Bacteria - 154; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 542.0) & (original description: Putative TIC21, Description = Protein TIC 21, chloroplastic, PFAM = PF12263)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf08151_108759-120535' '(at3g24590 : 330.0) Encodes a signal peptidase Plsp1 (plastidic type I signal peptidase 1). Required for thylakoid development. Functions in the maturation of the 75-kD component of the translocon at the outer envelope membrane of chloroplasts and oxygen evolving complex subunit 33 (OE33).; plastidic type i signal peptidase 1 (PLSP1); FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis, thylakoid membrane organization, protein maturation; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, plastid envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (InterPro:IPR011056), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927), Peptidase S26A, signal peptidase I, conserved site (InterPro:IPR019758), Peptidase S26, conserved region (InterPro:IPR019533), Peptidase S26A, signal peptidase I (InterPro:IPR000223), Peptidase S26A, signal peptidase I, serine active site (InterPro:IPR019756); BEST Arabidopsis thaliana protein match is: Peptidase S24/S26A/S26B/S26C family protein (TAIR:AT1G06870.1); Has 9773 Blast hits to 9438 proteins in 2404 species: Archae - 0; Bacteria - 7280; Metazoa - 206; Fungi - 105; Plants - 230; Viruses - 0; Other Eukaryotes - 1952 (source: NCBI BLink). & (gnl|cdd|35392 : 166.0) no description available & (reliability: 660.0) & (original description: Putative PLSP1, Description = Chloroplast processing peptidase, PFAM = PF10502)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf08621_418589-436197' '(at5g16620 : 309.0) chloroplast protein import (Tic40); TIC40; INVOLVED IN: protein import into chloroplast stroma, chloroplast organization; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), 26S proteasome complex ubiquitin receptor, subunit Rpn13 (InterPro:IPR006773); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36522 : 155.0) no description available & (reliability: 618.0) & (original description: Putative TIC40, Description = Protein TIC 40, chloroplastic, PFAM = )' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf08653_744730-755030' '(at3g17970 : 722.0) Integral chloroplast outer membrane protein.; translocon at the outer membrane of chloroplasts 64-III (TOC64-III); FUNCTIONS IN: binding, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; LOCATED IN: integral to chloroplast outer membrane, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Amidase (InterPro:IPR000120), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: translocon at the outer membrane of chloroplasts 64-V (TAIR:AT5G09420.1); Has 32911 Blast hits to 27744 proteins in 2680 species: Archae - 530; Bacteria - 15888; Metazoa - 4120; Fungi - 2515; Plants - 2100; Viruses - 0; Other Eukaryotes - 7758 (source: NCBI BLink). & (gnl|cdd|76569 : 307.0) no description available & (gnl|cdd|36425 : 222.0) no description available & (reliability: 1444.0) & (original description: Putative TOC64, Description = Translocon at the outer membrane of chloroplasts 64, PFAM = PF01425)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf08757_91933-98506' '(at3g46740 : 1254.0) Component of the translocon outer membrane (TOC) complex. Forms the outer envelope translocation channel (beta-barrel). Plays a role in preprotein conductance. Imported into chloroplast. Expressed in young dividing photosynthetic tissues. Knockout mutants are embryo lethal with arrested development at the two-cell stage. Knockout mutants have abnormal etioplasts.; translocon at the outer envelope membrane of chloroplasts 75-III (TOC75-III); FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein targeting to chloroplast, chloroplast organization, embryonic morphogenesis; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial surface antigen (D15) (InterPro:IPR000184), Chloroplast envelope protein translocase, IAP75 (InterPro:IPR005689), Surface antigen variable number (InterPro:IPR010827); BEST Arabidopsis thaliana protein match is: Outer membrane OMP85 family protein (TAIR:AT4G09080.1); Has 4030 Blast hits to 1859 proteins in 343 species: Archae - 0; Bacteria - 806; Metazoa - 1937; Fungi - 82; Plants - 633; Viruses - 22; Other Eukaryotes - 550 (source: NCBI BLink). & (q43715|toc75_pea : 1189.0) Protein TOC75, chloroplast precursor (75 kDa translocon at the outer-envelope-membrane of chloroplasts) (Import intermediate associated protein of 75 kDa) (75 kDa chloroplast outer envelope protein) - Pisum sativum (Garden pea) & (gnl|cdd|85243 : 115.0) no description available & (reliability: 2508.0) & (original description: Putative IAP75, Description = Protein TOC75, chloroplastic, PFAM = PF01103)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf09929_107068-115214' '(at5g20300 : 788.0) Avirulence induced gene (AIG1) family protein; FUNCTIONS IN: GTP binding; LOCATED IN: chloroplast outer membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: multimeric translocon complex in the outer envelope membrane 132 (TAIR:AT2G16640.1); Has 979 Blast hits to 964 proteins in 184 species: Archae - 2; Bacteria - 204; Metazoa - 369; Fungi - 41; Plants - 292; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|57945 : 309.0) no description available & (q41009|toc34_pea : 111.0) Translocase of chloroplast 34 (EC 3.6.5.-) (34 kDa chloroplast outer envelope protein) (GTP-binding protein OEP34) (GTP-binding protein IAP34) - Pisum sativum (Garden pea) & (reliability: 1576.0) & (original description: Putative TOC90, Description = Translocase of chloroplast 90, chloroplastic, PFAM = PF04548;PF11886)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf11123_117567-129368' '(at2g18710 : 731.0) Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid.; SECY homolog 1 (SCY1); FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein secretion, protein transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SecY protein (InterPro:IPR002208); BEST Arabidopsis thaliana protein match is: SecY protein transport family protein (TAIR:AT2G31530.1); Has 9180 Blast hits to 9165 proteins in 2700 species: Archae - 72; Bacteria - 5385; Metazoa - 19; Fungi - 2; Plants - 102; Viruses - 0; Other Eukaryotes - 3600 (source: NCBI BLink). & (p93690|secy_spiol : 713.0) Preprotein translocase secY subunit, chloroplast precursor (CpSecY) - Spinacia oleracea (Spinach) & (gnl|cdd|82857 : 374.0) no description available & (reliability: 1462.0) & (original description: Putative SCY1, Description = Preprotein translocase subunit SCY1, chloroplastic, PFAM = PF00344)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf12680_298860-308039' '(at1g24490 : 437.0) Homologue of the Alb3/Oxa1/YidC family. ALB4 is almost identical to the Alb3/Oxa1/YidC domain of the previously described 110 kDa inner envelope protein ARTEMIS. However, ALB4 is expressed as a separate 55 kDa protein and is located in the thylakoid membrane of chloroplasts. Analysis of a T-DNA insertion line with a reduced level of Alb4 revealed chloroplasts with an altered ultrastructure. Mutant plastids are larger, more spherical in appearance and the grana stacks within the mutant lines are less appressed than in the wild-type chloroplasts. ALB4 is required for proper chloroplast biogenesis.; ALBINA 4 (ALB4); CONTAINS InterPro DOMAIN/s: Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Membrane insertion protein, OxaA/YidC, core (InterPro:IPR020001); BEST Arabidopsis thaliana protein match is: 63 kDa inner membrane family protein (TAIR:AT2G28800.1); Has 8058 Blast hits to 8029 proteins in 2465 species: Archae - 0; Bacteria - 5573; Metazoa - 87; Fungi - 22; Plants - 115; Viruses - 0; Other Eukaryotes - 2261 (source: NCBI BLink). & (q9fy06|ppf1_pea : 396.0) Inner membrane protein PPF-1, chloroplast precursor (Post-floral-specific protein 1) - Pisum sativum (Garden pea) & (gnl|cdd|65847 : 206.0) no description available & (gnl|cdd|36453 : 179.0) no description available & (reliability: 824.0) & (original description: Putative ALB3L1, Description = ALBINO3-like protein 1, chloroplastic, PFAM = PF02096)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf13041_281845-291713' '(at4g33350 : 319.0) Tic22-like family protein; LOCATED IN: chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chloroplast protein import component Tic22 (InterPro:IPR005692), Tic22-like (InterPro:IPR007378); BEST Arabidopsis thaliana protein match is: Tic22-like family protein (TAIR:AT3G23710.1). & (gnl|cdd|67874 : 278.0) no description available & (reliability: 638.0) & (original description: Putative TIC22, Description = Protein TIC 22, chloroplastic, PFAM = PF04278)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf13206_271735-278724' '(at2g45770 : 525.0) chloroplast SRP receptor homolog, alpha subunit CPFTSY. Required for LHCP integration into isolated thylakoids.; CPFTSY; FUNCTIONS IN: GTP binding; INVOLVED IN: protein import into chloroplast thylakoid membrane, protein targeting, thylakoid membrane organization, photosynthetic electron transport in photosystem II; LOCATED IN: chloroplast, signal recognition particle, endoplasmic reticulum targeting, chloroplast thylakoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal recognition particle, SRP54 subunit, helical bundle (InterPro:IPR013822), Signal recognition particle, SRP54 subunit, GTPase (InterPro:IPR000897), Cell division transporter substrate-binding protein FtsY (InterPro:IPR004390); BEST Arabidopsis thaliana protein match is: chloroplast signal recognition particle 54 kDa subunit (TAIR:AT5G03940.1). & (gnl|cdd|30898 : 331.0) no description available & (gnl|cdd|35999 : 305.0) no description available & (p49970|sr543_horvu : 117.0) Signal recognition particle 54 kDa protein 3 (SRP54) - Hordeum vulgare (Barley) & (reliability: 1050.0) & (original description: Putative CPFTSY, Description = Cell division protein FtsY homolog, chloroplastic, PFAM = PF00448;PF02881)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf18879_18756-22555' '(at3g24590 : 191.0) Encodes a signal peptidase Plsp1 (plastidic type I signal peptidase 1). Required for thylakoid development. Functions in the maturation of the 75-kD component of the translocon at the outer envelope membrane of chloroplasts and oxygen evolving complex subunit 33 (OE33).; plastidic type i signal peptidase 1 (PLSP1); FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis, thylakoid membrane organization, protein maturation; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, plastid envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (InterPro:IPR011056), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927), Peptidase S26A, signal peptidase I, conserved site (InterPro:IPR019758), Peptidase S26, conserved region (InterPro:IPR019533), Peptidase S26A, signal peptidase I (InterPro:IPR000223), Peptidase S26A, signal peptidase I, serine active site (InterPro:IPR019756); BEST Arabidopsis thaliana protein match is: Peptidase S24/S26A/S26B/S26C family protein (TAIR:AT1G06870.1); Has 9773 Blast hits to 9438 proteins in 2404 species: Archae - 0; Bacteria - 7280; Metazoa - 206; Fungi - 105; Plants - 230; Viruses - 0; Other Eukaryotes - 1952 (source: NCBI BLink). & (gnl|cdd|35392 : 91.6) no description available & (reliability: 382.0) & (original description: Putative lepB, Description = Signal peptidase I, PFAM = PF00717)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf23814_173959-180802' '(at2g28900 : 162.0) Encodes AtOEP16, a 16-KDa plastid outer membrane protein involved in plastid import of protochlorophyllide oxidoreductase A. Predominantly expressed in leaves and is also inducible by cold treatment.; outer plastid envelope protein 16-1 (OEP16-1); FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast, plastid outer membrane, vacuole, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (TAIR:AT4G16160.1); Has 150 Blast hits to 150 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 150; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|85997 : 80.7) no description available & (reliability: 324.0) & (original description: Putative OEP16, Description = Outer envelope pore protein 16, chloroplastic, PFAM = PF02466)' T '29.3.3' 'protein.targeting.chloroplast' 'niben101scf34007_23020-26932' '(at1g04940 : 342.0) Tic20 is believed to function as a component of the protein-conducting channel at the inner envelope membrane. Genes AT1G04940 and AT1G04945 were switched for the TAIR7 genome release to give consistency with MIPs annotation.; translocon at the inner envelope membrane of chloroplasts 20 (TIC20); CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein ycf60 (InterPro:IPR019109), Chloroplast protein import component Tic20 (InterPro:IPR005691); BEST Arabidopsis thaliana protein match is: HIT-type Zinc finger family protein (TAIR:AT1G04945.3); Has 279 Blast hits to 278 proteins in 76 species: Archae - 0; Bacteria - 100; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|88229 : 222.0) no description available & (reliability: 684.0) & (original description: Putative IAP21, Description = Tic20-like protein, PFAM = PF16166)' T '29.3.4' 'protein.targeting.secretory pathway' 'niben044scf00005355ctg015_1461-4661' '(at1g21900 : 212.0) emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT1G09580.1); Has 1629 Blast hits to 1627 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 735; Fungi - 476; Plants - 235; Viruses - 0; Other Eukaryotes - 183 (source: NCBI BLink). & (gnl|cdd|36904 : 204.0) no description available & (reliability: 390.0) & (original description: Putative CYB, Description = Transmembrane emp24 domain-containing protein 10, PFAM = PF01105)' T '29.3.4' 'protein.targeting.secretory pathway' 'niben101scf01180_686966-696254' '(at1g09580 : 233.0) emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT1G57620.1); Has 1762 Blast hits to 1760 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 806; Fungi - 509; Plants - 239; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink). & (gnl|cdd|36904 : 233.0) no description available & (reliability: 462.0) & (original description: Putative At1g09580, Description = Transmembrane emp24 domain-containing protein p24delta3, PFAM = PF01105)' T '29.3.4' 'protein.targeting.secretory pathway' 'niben101scf03804_976070-989107' '(at1g09580 : 264.0) emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT1G57620.1); Has 1762 Blast hits to 1760 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 806; Fungi - 509; Plants - 239; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink). & (gnl|cdd|36904 : 258.0) no description available & (reliability: 496.0) & (original description: Putative CYB, Description = Transmembrane emp24 domain-containing protein 10, PFAM = PF01105)' T '29.3.4' 'protein.targeting.secretory pathway' 'niben101scf03904_27084-36084' '(at1g09580 : 271.0) emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT1G57620.1); Has 1762 Blast hits to 1760 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 806; Fungi - 509; Plants - 239; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink). & (gnl|cdd|36904 : 265.0) no description available & (reliability: 506.0) & (original description: Putative At1g09580, Description = Transmembrane emp24 domain-containing protein p24delta3, PFAM = PF01105)' T '29.3.4' 'protein.targeting.secretory pathway' 'niben101scf03937_378626-385716' '(at1g09580 : 265.0) emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT1G57620.1); Has 1762 Blast hits to 1760 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 806; Fungi - 509; Plants - 239; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink). & (gnl|cdd|36904 : 263.0) no description available & (reliability: 504.0) & (original description: Putative CYB, Description = Transmembrane emp24 domain-containing protein 10, PFAM = PF01105)' T '29.3.4' 'protein.targeting.secretory pathway' 'niben101scf05732_186950-193469' '(at1g09580 : 267.0) emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT1G57620.1); Has 1762 Blast hits to 1760 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 806; Fungi - 509; Plants - 239; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink). & (gnl|cdd|36904 : 264.0) no description available & (reliability: 510.0) & (original description: Putative At1g21900, Description = Transmembrane emp24 domain-containing protein p24delta5, PFAM = PF01105)' T '29.3.4' 'protein.targeting.secretory pathway' 'niben101scf05982_163207-176012' '(at1g02010 : 899.0) member of KEULE Gene Family; secretory 1A (SEC1A); FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, vesicle-mediated transport, vesicle docking involved in exocytosis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: Sec1/munc18-like (SM) proteins superfamily (TAIR:AT1G12360.1). & (q7xwp3|sec1a_orysa : 802.0) Probable protein transport Sec1a - Oryza sativa (Rice) & (gnl|cdd|36514 : 588.0) no description available & (gnl|cdd|85171 : 292.0) no description available & (reliability: 1798.0) & (original description: Putative SEC1A, Description = Protein transport Sec1a, PFAM = PF00995)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'nbv0.3scaffold4452_43887-51870' '(at1g72280 : 606.0) endoplasmic reticulum oxidoreductin; endoplasmic reticulum oxidoreductins 1 (ERO1); FUNCTIONS IN: FAD binding, oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: oxidation reduction, protein thiol-disulfide exchange; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Endoplasmic reticulum oxidoreductin 1 (InterPro:IPR007266); BEST Arabidopsis thaliana protein match is: endoplasmic reticulum oxidoreductins 2 (TAIR:AT2G38960.1); Has 485 Blast hits to 477 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 149; Plants - 72; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|37819 : 478.0) no description available & (gnl|cdd|86558 : 457.0) no description available & (reliability: 1212.0) & (original description: Putative AERO1, Description = Endoplasmic reticulum oxidoreductin-1, PFAM = PF04137)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'nbv0.3scaffold22099_16188-22246' '(at3g60600 : 201.0) Encodes VAP27 (for Vesicle-Associated Protein). VAP27 has high homology to the VAP33 family of SNARE-like proteins from animals. May be involved in vesicular transport to or from the ER. Located exclusively in limiting membrane of protein storage vacuoles. Binds SRC2.; VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1 (VAP27-1); FUNCTIONS IN: protein binding; INVOLVED IN: intracellular transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: plant VAP homolog 12 (TAIR:AT2G45140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35660 : 117.0) no description available & (gnl|cdd|84916 : 98.5) no description available & (reliability: 394.0) & (original description: Putative PVA11, Description = Vesicle-associated protein 1-1, PFAM = PF00635)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'nbv0.3scaffold23112_11828-17819' '(gnl|cdd|66892 : 248.0) no description available & (gnl|cdd|36901 : 247.0) no description available & (at4g39220 : 233.0) Key player of retrieval of ER membrane proteins; ATRER1A; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: endoplasmatic reticulum retrieval protein 1B (TAIR:AT2G21600.1); Has 516 Blast hits to 513 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 155; Fungi - 150; Plants - 130; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative RER1B, Description = Protein RER1B, PFAM = PF03248)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'nbv0.3scaffold28436_12106-17148' '(gnl|cdd|36901 : 245.0) no description available & (gnl|cdd|66892 : 245.0) no description available & (at4g39220 : 214.0) Key player of retrieval of ER membrane proteins; ATRER1A; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: endoplasmatic reticulum retrieval protein 1B (TAIR:AT2G21600.1); Has 516 Blast hits to 513 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 155; Fungi - 150; Plants - 130; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative RER1A, Description = Protein RER1A, PFAM = PF03248)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'nbv0.3scaffold52686_4857-13354' '(at4g38790 : 342.0) ER lumen protein retaining receptor family protein; FUNCTIONS IN: ER retention sequence binding, receptor activity; INVOLVED IN: protein retention in ER lumen, protein transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: ER lumen protein retaining receptor (InterPro:IPR000133); BEST Arabidopsis thaliana protein match is: ER lumen protein retaining receptor family protein (TAIR:AT2G21190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38316 : 192.0) no description available & (reliability: 684.0) & (original description: Putative ERD2B, Description = KDEL receptor B, PFAM = PF00810)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'nbv0.3scaffold61315_4357-10250' '(at3g25160 : 284.0) ER lumen protein retaining receptor family protein; FUNCTIONS IN: ER retention sequence binding, receptor activity; INVOLVED IN: protein retention in ER lumen, protein transport; LOCATED IN: integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ER lumen protein retaining receptor (InterPro:IPR000133); BEST Arabidopsis thaliana protein match is: ER lumen protein retaining receptor family protein (TAIR:AT4G38790.1); Has 889 Blast hits to 889 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 314; Fungi - 182; Plants - 232; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (gnl|cdd|38316 : 219.0) no description available & (gnl|cdd|64663 : 113.0) no description available & (q9ztn2|erd2_pethy : 83.2) ER lumen protein retaining receptor (HDEL receptor) (PGP169-12) - Petunia hybrida (Petunia) & (reliability: 568.0) & (original description: Putative ERD2B, Description = KDEL receptor B, PFAM = PF00810)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'nbv0.3scaffold62361_4143-6683' '(at3g60600 : 118.0) Encodes VAP27 (for Vesicle-Associated Protein). VAP27 has high homology to the VAP33 family of SNARE-like proteins from animals. May be involved in vesicular transport to or from the ER. Located exclusively in limiting membrane of protein storage vacuoles. Binds SRC2.; VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1 (VAP27-1); FUNCTIONS IN: protein binding; INVOLVED IN: intracellular transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: plant VAP homolog 12 (TAIR:AT2G45140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35660 : 88.0) no description available & (reliability: 216.0) & (original description: Putative Os02g0661900, Description = Os02g0661900 protein, PFAM = PF00635)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'nbv0.5scaffold595_9606-14463' '(gnl|cdd|36901 : 256.0) no description available & (gnl|cdd|66892 : 255.0) no description available & (at2g21600 : 240.0) Key player of retrieval of ER membrane proteins; endoplasmatic reticulum retrieval protein 1B (RER1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: retrograde vesicle-mediated transport, Golgi to ER; LOCATED IN: Golgi apparatus, endoplasmic reticulum, cis-Golgi network; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: Rer1 family protein (TAIR:AT4G39220.1); Has 516 Blast hits to 512 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 154; Fungi - 152; Plants - 129; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 480.0) & (original description: Putative RER1A, Description = Protein RER1A, PFAM = PF03248)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'nbv0.5scaffold617_434851-438010' '(gnl|cdd|36901 : 160.0) no description available & (gnl|cdd|66892 : 151.0) no description available & (at2g21600 : 120.0) Key player of retrieval of ER membrane proteins; endoplasmatic reticulum retrieval protein 1B (RER1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: retrograde vesicle-mediated transport, Golgi to ER; LOCATED IN: Golgi apparatus, endoplasmic reticulum, cis-Golgi network; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: Rer1 family protein (TAIR:AT4G39220.1); Has 516 Blast hits to 512 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 154; Fungi - 152; Plants - 129; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative rer, Description = Putative endoplasmatic reticulum retrieval protein, PFAM = PF03248)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'nbv0.5scaffold5682_79641-87868' '(q9ztn2|erd2_pethy : 350.0) ER lumen protein retaining receptor (HDEL receptor) (PGP169-12) - Petunia hybrida (Petunia) & (at3g25040 : 332.0) Encodes ERD2b. a homolog of the yeast endoplasmic reticulum retention receptor ERD2. Mutations in ERD2b compromise EFR but not FLS2 signaling.; endoplasmic reticulum retention defective 2B (ERD2B); FUNCTIONS IN: ER retention sequence binding, receptor activity; INVOLVED IN: defense response signaling pathway, resistance gene-independent, protein transport; LOCATED IN: integral to membrane, Golgi apparatus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ER lumen protein retaining receptor (InterPro:IPR000133); BEST Arabidopsis thaliana protein match is: ER lumen protein retaining receptor family protein (TAIR:AT1G29330.1); Has 912 Blast hits to 910 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 322; Fungi - 187; Plants - 229; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (gnl|cdd|64663 : 257.0) no description available & (gnl|cdd|38316 : 245.0) no description available & (reliability: 664.0) & (original description: Putative ERD2, Description = ER lumen protein-retaining receptor, PFAM = PF00810)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'niben044scf00009478ctg006_1-4388' '(gnl|cdd|36901 : 264.0) no description available & (gnl|cdd|66892 : 262.0) no description available & (at2g21600 : 239.0) Key player of retrieval of ER membrane proteins; endoplasmatic reticulum retrieval protein 1B (RER1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: retrograde vesicle-mediated transport, Golgi to ER; LOCATED IN: Golgi apparatus, endoplasmic reticulum, cis-Golgi network; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: Rer1 family protein (TAIR:AT4G39220.1); Has 516 Blast hits to 512 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 154; Fungi - 152; Plants - 129; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 478.0) & (original description: Putative RER1, Description = Protein RER1, PFAM = PF03248)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'niben044scf00011082ctg001_16122-19618' '(at2g21600 : 243.0) Key player of retrieval of ER membrane proteins; endoplasmatic reticulum retrieval protein 1B (RER1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: retrograde vesicle-mediated transport, Golgi to ER; LOCATED IN: Golgi apparatus, endoplasmic reticulum, cis-Golgi network; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: Rer1 family protein (TAIR:AT4G39220.1); Has 516 Blast hits to 512 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 154; Fungi - 152; Plants - 129; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|66892 : 239.0) no description available & (gnl|cdd|36901 : 237.0) no description available & (reliability: 486.0) & (original description: Putative rer1, Description = Retrieval of early ER protein Rer1, PFAM = PF03248)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'niben044scf00048818ctg005_10345-16388' '(at1g72280 : 623.0) endoplasmic reticulum oxidoreductin; endoplasmic reticulum oxidoreductins 1 (ERO1); FUNCTIONS IN: FAD binding, oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: oxidation reduction, protein thiol-disulfide exchange; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Endoplasmic reticulum oxidoreductin 1 (InterPro:IPR007266); BEST Arabidopsis thaliana protein match is: endoplasmic reticulum oxidoreductins 2 (TAIR:AT2G38960.1); Has 485 Blast hits to 477 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 149; Plants - 72; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|37819 : 488.0) no description available & (gnl|cdd|86558 : 476.0) no description available & (reliability: 1246.0) & (original description: Putative AERO1, Description = Endoplasmic reticulum oxidoreductin-1, PFAM = PF04137)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'niben101scf00113_520955-526551' '(at3g25160 : 326.0) ER lumen protein retaining receptor family protein; FUNCTIONS IN: ER retention sequence binding, receptor activity; INVOLVED IN: protein retention in ER lumen, protein transport; LOCATED IN: integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ER lumen protein retaining receptor (InterPro:IPR000133); BEST Arabidopsis thaliana protein match is: ER lumen protein retaining receptor family protein (TAIR:AT4G38790.1); Has 889 Blast hits to 889 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 314; Fungi - 182; Plants - 232; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (gnl|cdd|38316 : 233.0) no description available & (gnl|cdd|64663 : 118.0) no description available & (q9ztn2|erd2_pethy : 89.4) ER lumen protein retaining receptor (HDEL receptor) (PGP169-12) - Petunia hybrida (Petunia) & (reliability: 652.0) & (original description: Putative ERD2B, Description = KDEL receptor B, PFAM = PF00810)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'niben101scf00202_135580-138991' '(gnl|cdd|66892 : 266.0) no description available & (gnl|cdd|36901 : 264.0) no description available & (at2g21600 : 240.0) Key player of retrieval of ER membrane proteins; endoplasmatic reticulum retrieval protein 1B (RER1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: retrograde vesicle-mediated transport, Golgi to ER; LOCATED IN: Golgi apparatus, endoplasmic reticulum, cis-Golgi network; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: Rer1 family protein (TAIR:AT4G39220.1); Has 516 Blast hits to 512 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 154; Fungi - 152; Plants - 129; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 480.0) & (original description: Putative RER1B, Description = Protein RER1B, PFAM = PF03248)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'niben101scf00527_579798-588861' '(at2g45140 : 215.0) Encodes a Plant VAMP-Associated protein that localizes to the ER and binds to the sitosterol-binding protein ORP3a. The WFDE motif in ORP3a appears to be important for this direct interaction. Mutation of this motif causes ORP3a to relocalize to the Golgi and cytosol. The interaction between PVA12 and ORP3a does not appear to be sterol-dependent.; plant VAP homolog 12 (PVA12); FUNCTIONS IN: structural molecule activity; LOCATED IN: cytosol, endoplasmic reticulum, nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: vesicle associated protein (TAIR:AT3G60600.1); Has 1106 Blast hits to 1079 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 441; Fungi - 140; Plants - 434; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|35660 : 130.0) no description available & (gnl|cdd|84916 : 100.0) no description available & (reliability: 430.0) & (original description: Putative PVA12, Description = Vesicle-associated protein 1-2, PFAM = PF00635)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'niben101scf00885_1398248-1406231' '(at1g72280 : 610.0) endoplasmic reticulum oxidoreductin; endoplasmic reticulum oxidoreductins 1 (ERO1); FUNCTIONS IN: FAD binding, oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: oxidation reduction, protein thiol-disulfide exchange; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Endoplasmic reticulum oxidoreductin 1 (InterPro:IPR007266); BEST Arabidopsis thaliana protein match is: endoplasmic reticulum oxidoreductins 2 (TAIR:AT2G38960.1); Has 485 Blast hits to 477 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 149; Plants - 72; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|37819 : 479.0) no description available & (gnl|cdd|86558 : 456.0) no description available & (reliability: 1220.0) & (original description: Putative AERO1, Description = Endoplasmic reticulum oxidoreductin-1, PFAM = PF04137)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'niben101scf00917_387472-396698' '(gnl|cdd|66892 : 255.0) no description available & (gnl|cdd|36901 : 254.0) no description available & (at4g39220 : 213.0) Key player of retrieval of ER membrane proteins; ATRER1A; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: endoplasmatic reticulum retrieval protein 1B (TAIR:AT2G21600.1); Has 516 Blast hits to 513 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 155; Fungi - 150; Plants - 130; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative RER1A, Description = Protein RER1A, PFAM = PF03248)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'niben101scf01847_73060-80928' '(at4g38790 : 431.0) ER lumen protein retaining receptor family protein; FUNCTIONS IN: ER retention sequence binding, receptor activity; INVOLVED IN: protein retention in ER lumen, protein transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: ER lumen protein retaining receptor (InterPro:IPR000133); BEST Arabidopsis thaliana protein match is: ER lumen protein retaining receptor family protein (TAIR:AT2G21190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38316 : 273.0) no description available & (gnl|cdd|64663 : 121.0) no description available & (q9ztn2|erd2_pethy : 83.2) ER lumen protein retaining receptor (HDEL receptor) (PGP169-12) - Petunia hybrida (Petunia) & (reliability: 862.0) & (original description: Putative ERD2B, Description = KDEL receptor B, PFAM = PF00810)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'niben101scf01852_12605-19371' '(at1g75760 : 403.0) ER lumen protein retaining receptor family protein; FUNCTIONS IN: ER retention sequence binding, receptor activity; INVOLVED IN: protein retention in ER lumen, protein transport; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ER lumen protein retaining receptor (InterPro:IPR000133); BEST Arabidopsis thaliana protein match is: ER lumen protein retaining receptor family protein (TAIR:AT1G19970.1); Has 891 Blast hits to 891 proteins in 228 species: Archae - 0; Bacteria - 0; Metazoa - 315; Fungi - 179; Plants - 231; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|38316 : 276.0) no description available & (gnl|cdd|64663 : 120.0) no description available & (q9ztn2|erd2_pethy : 80.5) ER lumen protein retaining receptor (HDEL receptor) (PGP169-12) - Petunia hybrida (Petunia) & (reliability: 806.0) & (original description: Putative At2g21190, Description = Putative ER lumen protein retaining receptor, PFAM = PF00810)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'niben101scf02445_1174022-1179250' '(gnl|cdd|66892 : 247.0) no description available & (gnl|cdd|36901 : 246.0) no description available & (at4g39220 : 238.0) Key player of retrieval of ER membrane proteins; ATRER1A; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: endoplasmatic reticulum retrieval protein 1B (TAIR:AT2G21600.1); Has 516 Blast hits to 513 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 155; Fungi - 150; Plants - 130; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 476.0) & (original description: Putative RER1C, Description = Protein RER1C, PFAM = PF03248)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'niben101scf03337_731434-733982' '(at3g60600 : 119.0) Encodes VAP27 (for Vesicle-Associated Protein). VAP27 has high homology to the VAP33 family of SNARE-like proteins from animals. May be involved in vesicular transport to or from the ER. Located exclusively in limiting membrane of protein storage vacuoles. Binds SRC2.; VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1 (VAP27-1); FUNCTIONS IN: protein binding; INVOLVED IN: intracellular transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: plant VAP homolog 12 (TAIR:AT2G45140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35660 : 90.3) no description available & (gnl|cdd|84916 : 80.4) no description available & (reliability: 216.0) & (original description: Putative CDS5, Description = Vesicle-associated protein 1-2, PFAM = PF00635)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'niben101scf03374_93916-100023' '(at2g45140 : 205.0) Encodes a Plant VAMP-Associated protein that localizes to the ER and binds to the sitosterol-binding protein ORP3a. The WFDE motif in ORP3a appears to be important for this direct interaction. Mutation of this motif causes ORP3a to relocalize to the Golgi and cytosol. The interaction between PVA12 and ORP3a does not appear to be sterol-dependent.; plant VAP homolog 12 (PVA12); FUNCTIONS IN: structural molecule activity; LOCATED IN: cytosol, endoplasmic reticulum, nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: vesicle associated protein (TAIR:AT3G60600.1); Has 1106 Blast hits to 1079 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 441; Fungi - 140; Plants - 434; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|35660 : 124.0) no description available & (gnl|cdd|84916 : 107.0) no description available & (reliability: 410.0) & (original description: Putative CDS5, Description = Vesicle-associated protein 1-2, PFAM = PF00635)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'niben101scf03479_55470-65105' '(at3g25160 : 283.0) ER lumen protein retaining receptor family protein; FUNCTIONS IN: ER retention sequence binding, receptor activity; INVOLVED IN: protein retention in ER lumen, protein transport; LOCATED IN: integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ER lumen protein retaining receptor (InterPro:IPR000133); BEST Arabidopsis thaliana protein match is: ER lumen protein retaining receptor family protein (TAIR:AT4G38790.1); Has 889 Blast hits to 889 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 314; Fungi - 182; Plants - 232; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (gnl|cdd|38316 : 204.0) no description available & (gnl|cdd|64663 : 112.0) no description available & (reliability: 566.0) & (original description: Putative ERD2B, Description = KDEL receptor B, PFAM = PF00810)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'niben101scf03599_117079-134472' '(at2g45140 : 289.0) Encodes a Plant VAMP-Associated protein that localizes to the ER and binds to the sitosterol-binding protein ORP3a. The WFDE motif in ORP3a appears to be important for this direct interaction. Mutation of this motif causes ORP3a to relocalize to the Golgi and cytosol. The interaction between PVA12 and ORP3a does not appear to be sterol-dependent.; plant VAP homolog 12 (PVA12); FUNCTIONS IN: structural molecule activity; LOCATED IN: cytosol, endoplasmic reticulum, nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: vesicle associated protein (TAIR:AT3G60600.1); Has 1106 Blast hits to 1079 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 441; Fungi - 140; Plants - 434; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|35660 : 127.0) no description available & (gnl|cdd|84916 : 103.0) no description available & (reliability: 578.0) & (original description: Putative PVA12, Description = Vesicle-associated protein 1-2, PFAM = PF00635)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'niben101scf03602_312387-317223' '(gnl|cdd|36901 : 260.0) no description available & (gnl|cdd|66892 : 259.0) no description available & (at4g39220 : 256.0) Key player of retrieval of ER membrane proteins; ATRER1A; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: endoplasmatic reticulum retrieval protein 1B (TAIR:AT2G21600.1); Has 516 Blast hits to 513 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 155; Fungi - 150; Plants - 130; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 512.0) & (original description: Putative RER1A, Description = Protein RER1A, PFAM = PF03248)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'niben101scf04217_50693-56751' '(at3g60600 : 212.0) Encodes VAP27 (for Vesicle-Associated Protein). VAP27 has high homology to the VAP33 family of SNARE-like proteins from animals. May be involved in vesicular transport to or from the ER. Located exclusively in limiting membrane of protein storage vacuoles. Binds SRC2.; VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1 (VAP27-1); FUNCTIONS IN: protein binding; INVOLVED IN: intracellular transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: plant VAP homolog 12 (TAIR:AT2G45140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35660 : 122.0) no description available & (gnl|cdd|84916 : 98.9) no description available & (reliability: 422.0) & (original description: Putative CDS5, Description = Vesicle-associated protein 1-2, PFAM = PF00635)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'niben101scf04225_270181-277767' '(at1g72280 : 622.0) endoplasmic reticulum oxidoreductin; endoplasmic reticulum oxidoreductins 1 (ERO1); FUNCTIONS IN: FAD binding, oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: oxidation reduction, protein thiol-disulfide exchange; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Endoplasmic reticulum oxidoreductin 1 (InterPro:IPR007266); BEST Arabidopsis thaliana protein match is: endoplasmic reticulum oxidoreductins 2 (TAIR:AT2G38960.1); Has 485 Blast hits to 477 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 149; Plants - 72; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|37819 : 484.0) no description available & (gnl|cdd|86558 : 476.0) no description available & (reliability: 1244.0) & (original description: Putative AERO1, Description = Endoplasmic reticulum oxidoreductin-1, PFAM = PF04137)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'niben101scf04784_147511-155298' '(gnl|cdd|66892 : 257.0) no description available & (gnl|cdd|36901 : 255.0) no description available & (at2g21600 : 233.0) Key player of retrieval of ER membrane proteins; endoplasmatic reticulum retrieval protein 1B (RER1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: retrograde vesicle-mediated transport, Golgi to ER; LOCATED IN: Golgi apparatus, endoplasmic reticulum, cis-Golgi network; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: Rer1 family protein (TAIR:AT4G39220.1); Has 516 Blast hits to 512 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 154; Fungi - 152; Plants - 129; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative RER1B, Description = Protein RER1B, PFAM = PF03248)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'niben101scf05082_244967-248701' '(at2g21600 : 245.0) Key player of retrieval of ER membrane proteins; endoplasmatic reticulum retrieval protein 1B (RER1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: retrograde vesicle-mediated transport, Golgi to ER; LOCATED IN: Golgi apparatus, endoplasmic reticulum, cis-Golgi network; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: Rer1 family protein (TAIR:AT4G39220.1); Has 516 Blast hits to 512 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 154; Fungi - 152; Plants - 129; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|66892 : 244.0) no description available & (gnl|cdd|36901 : 242.0) no description available & (reliability: 490.0) & (original description: Putative rer1, Description = Protein RER1, PFAM = PF03248)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'niben101scf05135_100607-118134' '(gnl|cdd|66892 : 235.0) no description available & (gnl|cdd|36901 : 233.0) no description available & (at4g39220 : 212.0) Key player of retrieval of ER membrane proteins; ATRER1A; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: endoplasmatic reticulum retrieval protein 1B (TAIR:AT2G21600.1); Has 516 Blast hits to 513 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 155; Fungi - 150; Plants - 130; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 424.0) & (original description: Putative RER1C, Description = Protein RER1C, PFAM = PF03248)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'niben101scf05948_684541-697830' '(at1g29330 : 319.0) Encodes a protein similar in sequence to animal and yeast endoplasmic reticulum retention signal receptor. This protein can functionally complement the yeast homologue. Transcript is detected in flower buds, stems, root, and leaves.; ENDOPLASMIC RETICULUM RETENTION DEFECTIVE 2 (ERD2); CONTAINS InterPro DOMAIN/s: ER lumen protein retaining receptor (InterPro:IPR000133); BEST Arabidopsis thaliana protein match is: endoplasmic reticulum retention defective 2B (TAIR:AT3G25040.1); Has 909 Blast hits to 907 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 321; Fungi - 187; Plants - 229; Viruses - 0; Other Eukaryotes - 172 (source: NCBI BLink). & (q9ztn2|erd2_pethy : 291.0) ER lumen protein retaining receptor (HDEL receptor) (PGP169-12) - Petunia hybrida (Petunia) & (gnl|cdd|64663 : 257.0) no description available & (gnl|cdd|38316 : 250.0) no description available & (reliability: 638.0) & (original description: Putative KdelR, Description = ER lumen protein-retaining receptor, PFAM = PF00810)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'niben101scf07261_71063-79668' '(at1g29330 : 322.0) Encodes a protein similar in sequence to animal and yeast endoplasmic reticulum retention signal receptor. This protein can functionally complement the yeast homologue. Transcript is detected in flower buds, stems, root, and leaves.; ENDOPLASMIC RETICULUM RETENTION DEFECTIVE 2 (ERD2); CONTAINS InterPro DOMAIN/s: ER lumen protein retaining receptor (InterPro:IPR000133); BEST Arabidopsis thaliana protein match is: endoplasmic reticulum retention defective 2B (TAIR:AT3G25040.1); Has 909 Blast hits to 907 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 321; Fungi - 187; Plants - 229; Viruses - 0; Other Eukaryotes - 172 (source: NCBI BLink). & (q9ztn2|erd2_pethy : 294.0) ER lumen protein retaining receptor (HDEL receptor) (PGP169-12) - Petunia hybrida (Petunia) & (gnl|cdd|64663 : 259.0) no description available & (gnl|cdd|38316 : 252.0) no description available & (reliability: 644.0) & (original description: Putative ERD2A, Description = ER lumen protein-retaining receptor A, PFAM = PF00810)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'niben101scf07428_315791-319599' '(at3g25160 : 259.0) ER lumen protein retaining receptor family protein; FUNCTIONS IN: ER retention sequence binding, receptor activity; INVOLVED IN: protein retention in ER lumen, protein transport; LOCATED IN: integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ER lumen protein retaining receptor (InterPro:IPR000133); BEST Arabidopsis thaliana protein match is: ER lumen protein retaining receptor family protein (TAIR:AT4G38790.1); Has 889 Blast hits to 889 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 314; Fungi - 182; Plants - 232; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (gnl|cdd|38316 : 200.0) no description available & (gnl|cdd|64663 : 93.4) no description available & (reliability: 518.0) & (original description: Putative Os09g0534200, Description = Os09g0534200 protein, PFAM = PF00810)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'niben101scf08280_299212-307853' '(q9ztn2|erd2_pethy : 346.0) ER lumen protein retaining receptor (HDEL receptor) (PGP169-12) - Petunia hybrida (Petunia) & (at3g25040 : 330.0) Encodes ERD2b. a homolog of the yeast endoplasmic reticulum retention receptor ERD2. Mutations in ERD2b compromise EFR but not FLS2 signaling.; endoplasmic reticulum retention defective 2B (ERD2B); FUNCTIONS IN: ER retention sequence binding, receptor activity; INVOLVED IN: defense response signaling pathway, resistance gene-independent, protein transport; LOCATED IN: integral to membrane, Golgi apparatus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ER lumen protein retaining receptor (InterPro:IPR000133); BEST Arabidopsis thaliana protein match is: ER lumen protein retaining receptor family protein (TAIR:AT1G29330.1); Has 912 Blast hits to 910 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 322; Fungi - 187; Plants - 229; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (gnl|cdd|64663 : 255.0) no description available & (gnl|cdd|38316 : 242.0) no description available & (reliability: 660.0) & (original description: Putative ERD2, Description = ER lumen protein-retaining receptor, PFAM = PF00810)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'niben101scf20077_35050-43603' '(at2g39960 : 275.0) Microsomal signal peptidase 25 kDa subunit (SPC25); FUNCTIONS IN: peptidase activity; INVOLVED IN: signal peptide processing; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: male gametophyte, callus; CONTAINS InterPro DOMAIN/s: Signal peptidase complex subunit 2 (InterPro:IPR009582); BEST Arabidopsis thaliana protein match is: Microsomal signal peptidase 25 kDa subunit (SPC25) (TAIR:AT4G04200.1); Has 283 Blast hits to 281 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 171; Fungi - 36; Plants - 62; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|70183 : 180.0) no description available & (reliability: 550.0) & (original description: Putative At2g39960, Description = Probable signal peptidase complex subunit 2, PFAM = PF06703)' T '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'niben101scf30596_52397-58344' '(at3g25160 : 317.0) ER lumen protein retaining receptor family protein; FUNCTIONS IN: ER retention sequence binding, receptor activity; INVOLVED IN: protein retention in ER lumen, protein transport; LOCATED IN: integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ER lumen protein retaining receptor (InterPro:IPR000133); BEST Arabidopsis thaliana protein match is: ER lumen protein retaining receptor family protein (TAIR:AT4G38790.1); Has 889 Blast hits to 889 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 314; Fungi - 182; Plants - 232; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (gnl|cdd|38316 : 236.0) no description available & (gnl|cdd|64663 : 114.0) no description available & (q9ztn2|erd2_pethy : 86.3) ER lumen protein retaining receptor (HDEL receptor) (PGP169-12) - Petunia hybrida (Petunia) & (reliability: 634.0) & (original description: Putative ERD2B, Description = KDEL receptor B, PFAM = PF00810)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'nbv0.3scaffold8304_43020-53661' '(at1g73430 : 469.0) sec34-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: chloroplast, cis-Golgi network, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec34-like protein (InterPro:IPR007265); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37815 : 262.0) no description available & (reliability: 938.0) & (original description: Putative cog3, Description = Conserved oligomeric Golgi complex subunit 3, PFAM = )' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'nbv0.3scaffold44392_1-7284' '(at2g27460 : 711.0) sec23/sec24 transport family protein; FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPII vesicle coat; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT3G07100.1); Has 1620 Blast hits to 1606 proteins in 237 species: Archae - 0; Bacteria - 2; Metazoa - 540; Fungi - 539; Plants - 300; Viruses - 0; Other Eukaryotes - 239 (source: NCBI BLink). & (gnl|cdd|37196 : 364.0) no description available & (gnl|cdd|29241 : 161.0) no description available & (reliability: 1422.0) & (original description: Putative PGSC0003DMG400026338, Description = Sec23/Sec24, helical domain-containing protein, PFAM = PF04811)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'nbv0.3scaffold51663_1-5116' '(at4g01810 : 1151.0) Sec23/Sec24 protein transport family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular protein transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPII vesicle coat; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT2G21630.1); Has 8290 Blast hits to 5679 proteins in 621 species: Archae - 16; Bacteria - 1021; Metazoa - 2159; Fungi - 1153; Plants - 2353; Viruses - 447; Other Eukaryotes - 1141 (source: NCBI BLink). & (gnl|cdd|37197 : 570.0) no description available & (gnl|cdd|34652 : 195.0) no description available & (reliability: 2302.0) & (original description: Putative At4g01810, Description = Putative uncharacterized protein At4g01810, PFAM = PF08033;PF04815;PF04811;PF04810)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'nbv0.3scaffold63922_1-10832' '(at3g27530 : 1020.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC6 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (225 aa) portion of the protein.; golgin candidate 6 (GC6); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, Golgi vesicle transport, vesicle fusion with Golgi apparatus; LOCATED IN: cytosol, Golgi apparatus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uso1/p115 like vesicle tethering protein, C-terminal (InterPro:IPR006955), Armadillo-type fold (InterPro:IPR016024), Uso1/p115 like vesicle tethering protein, head region (InterPro:IPR006953); Has 8674 Blast hits to 6651 proteins in 794 species: Archae - 167; Bacteria - 1154; Metazoa - 4083; Fungi - 784; Plants - 382; Viruses - 31; Other Eukaryotes - 2073 (source: NCBI BLink). & (gnl|cdd|36164 : 279.0) no description available & (gnl|cdd|68444 : 88.1) no description available & (reliability: 2040.0) & (original description: Putative GC6, Description = Golgin candidate 6, PFAM = PF04871;PF04869)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'nbv0.5scaffold1442_79412-101839' '(at1g73430 : 1069.0) sec34-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: chloroplast, cis-Golgi network, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec34-like protein (InterPro:IPR007265); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37815 : 596.0) no description available & (gnl|cdd|67740 : 93.5) no description available & (reliability: 2138.0) & (original description: Putative BnaC02g22180D, Description = BnaC02g22180D protein, PFAM = PF04136)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'nbv0.5scaffold4814_12220-20478' '(at1g73430 : 539.0) sec34-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: chloroplast, cis-Golgi network, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec34-like protein (InterPro:IPR007265); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37815 : 317.0) no description available & (gnl|cdd|67740 : 118.0) no description available & (reliability: 1078.0) & (original description: Putative cog3, Description = Conserved oligomeric Golgi complex subunit 3, PFAM = PF04136)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'nbv0.5scaffold5399_98240-108376' '(at3g18480 : 273.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component, known as a golgin in mammals and yeast. A fluorescently-tagged version of CASP co-localizes with Golgi markers, and this localization appears to require the C-terminal (565ñ689aa) portion of the protein. The protein is inserted into a membrane in a type II orientation.; CCAAT-displacement protein alternatively spliced product (CASP); INVOLVED IN: intra-Golgi vesicle-mediated transport; LOCATED IN: integral to membrane, Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CASP, C-terminal (InterPro:IPR012955); Has 108439 Blast hits to 62245 proteins in 2877 species: Archae - 1242; Bacteria - 16953; Metazoa - 49041; Fungi - 8922; Plants - 5181; Viruses - 394; Other Eukaryotes - 26706 (source: NCBI BLink). & (gnl|cdd|36181 : 180.0) no description available & (gnl|cdd|71607 : 175.0) no description available & (reliability: 546.0) & (original description: Putative cutl1, Description = Protein CASP, PFAM = PF08172)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'nbv0.5scaffold5491_47368-60595' '(at3g07100 : 1145.0) Encodes SEC24a/ERMO2. Required for endoplasmic reticulum (ER) morphology.; ENDOPLASMIC RETICULUM MORPHOLOGY 2 (ERMO2); FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: transport, ER body organization; LOCATED IN: COPII vesicle coat; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: clone eighty-four (TAIR:AT3G44340.1); Has 86818 Blast hits to 46504 proteins in 1607 species: Archae - 60; Bacteria - 12149; Metazoa - 40940; Fungi - 13838; Plants - 8598; Viruses - 2013; Other Eukaryotes - 9220 (source: NCBI BLink). & (gnl|cdd|37196 : 809.0) no description available & (gnl|cdd|34633 : 510.0) no description available & (reliability: 2290.0) & (original description: Putative At3g07100, Description = Protein transport protein Sec24-like At3g07100, PFAM = PF04810;PF04811;PF04815;PF08033)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben044scf00003820ctg003_591-16385' '(at3g44340 : 839.0) homologous to yeast and animal Sec24 proteins; expression in yeast cells enhances their survival under oxidative stress conditions.; clone eighty-four (CEF); FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: response to oxidative stress, vesicle-mediated transport; LOCATED IN: COPII vesicle coat, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT4G32640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37195 : 671.0) no description available & (gnl|cdd|34633 : 375.0) no description available & (reliability: 1678.0) & (original description: Putative CEF, Description = Protein transport protein Sec24-like CEF, PFAM = PF04811;PF04810;PF08033)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben044scf00008003ctg000_1964-16290' '(at3g18480 : 648.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component, known as a golgin in mammals and yeast. A fluorescently-tagged version of CASP co-localizes with Golgi markers, and this localization appears to require the C-terminal (565ñ689aa) portion of the protein. The protein is inserted into a membrane in a type II orientation.; CCAAT-displacement protein alternatively spliced product (CASP); INVOLVED IN: intra-Golgi vesicle-mediated transport; LOCATED IN: integral to membrane, Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CASP, C-terminal (InterPro:IPR012955); Has 108439 Blast hits to 62245 proteins in 2877 species: Archae - 1242; Bacteria - 16953; Metazoa - 49041; Fungi - 8922; Plants - 5181; Viruses - 394; Other Eukaryotes - 26706 (source: NCBI BLink). & (gnl|cdd|36181 : 401.0) no description available & (gnl|cdd|71607 : 197.0) no description available & (reliability: 1296.0) & (original description: Putative CASP, Description = Protein CASP, PFAM = PF08172)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben044scf00020258ctg007_391-9078' '(at5g66030 : 271.0) Involved in golgi protein trafficking. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner. Localized to the golgi apparatus, tyrosine 717 in AtGRIP is crucial for Golgi localization.; ATGRIP; CONTAINS InterPro DOMAIN/s: GRIP (InterPro:IPR000237); Has 226693 Blast hits to 107013 proteins in 3750 species: Archae - 2739; Bacteria - 54726; Metazoa - 91166; Fungi - 18242; Plants - 12768; Viruses - 908; Other Eukaryotes - 46144 (source: NCBI BLink). & (reliability: 542.0) & (original description: Putative GRIP, Description = Protein GRIP, PFAM = )' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben044scf00020258ctg008_212-6211' '(at5g66030 : 241.0) Involved in golgi protein trafficking. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner. Localized to the golgi apparatus, tyrosine 717 in AtGRIP is crucial for Golgi localization.; ATGRIP; CONTAINS InterPro DOMAIN/s: GRIP (InterPro:IPR000237); Has 226693 Blast hits to 107013 proteins in 3750 species: Archae - 2739; Bacteria - 54726; Metazoa - 91166; Fungi - 18242; Plants - 12768; Viruses - 908; Other Eukaryotes - 46144 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative GRIP, Description = Protein GRIP, PFAM = PF01465)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben044scf00021509ctg010_1-4188' '(at3g24315 : 176.0) AtSec20; CONTAINS InterPro DOMAIN/s: Sec20 (InterPro:IPR005606); Has 291 Blast hits to 291 proteins in 130 species: Archae - 0; Bacteria - 0; Metazoa - 136; Fungi - 95; Plants - 46; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|67519 : 92.6) no description available & (reliability: 352.0) & (original description: Putative SEC20, Description = Sec20 family protein, PFAM = PF03908)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben044scf00024110ctg006_1-7945' '(gnl|cdd|37197 : 607.0) no description available & (at2g21630 : 595.0) Sec23/Sec24 protein transport family protein; FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: intracellular protein transport, transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPII vesicle coat; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT4G14160.2); Has 1585 Blast hits to 1570 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 525; Fungi - 514; Plants - 334; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink). & (gnl|cdd|34652 : 418.0) no description available & (reliability: 1190.0) & (original description: Putative SC23A, Description = SC23A, PFAM = PF00626;PF08033;PF04815;PF04811)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben044scf00024110ctg013_3664-5652' '(gnl|cdd|37197 : 188.0) no description available & (at3g23660 : 178.0) Sec23/Sec24 protein transport family protein; FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: intracellular protein transport, transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPII vesicle coat; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT4G14160.2). & (gnl|cdd|34652 : 145.0) no description available & (reliability: 356.0) & (original description: Putative sec231, Description = Protein transport protein SEC23, PFAM = PF04810)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben044scf00039874ctg006_2420-10159' '(at1g73430 : 405.0) sec34-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: chloroplast, cis-Golgi network, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec34-like protein (InterPro:IPR007265); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37815 : 213.0) no description available & (reliability: 810.0) & (original description: Putative cog3, Description = Conserved oligomeric Golgi complex subunit 3, PFAM = )' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben044scf00046899ctg005_12151-15345' '(at4g32640 : 214.0) Sec23/Sec24 protein transport family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular protein transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPII vesicle coat; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: clone eighty-four (TAIR:AT3G44340.1); Has 66049 Blast hits to 38054 proteins in 1391 species: Archae - 34; Bacteria - 8764; Metazoa - 33131; Fungi - 9611; Plants - 5387; Viruses - 1213; Other Eukaryotes - 7909 (source: NCBI BLink). & (gnl|cdd|37195 : 207.0) no description available & (gnl|cdd|34633 : 106.0) no description available & (reliability: 428.0) & (original description: Putative CEF, Description = Protein transport protein Sec24-like CEF, PFAM = PF00626;PF04815)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben101scf00204_60444-78363' '(at2g27460 : 1188.0) sec23/sec24 transport family protein; FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPII vesicle coat; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT3G07100.1); Has 1620 Blast hits to 1606 proteins in 237 species: Archae - 0; Bacteria - 2; Metazoa - 540; Fungi - 539; Plants - 300; Viruses - 0; Other Eukaryotes - 239 (source: NCBI BLink). & (gnl|cdd|37196 : 574.0) no description available & (gnl|cdd|34633 : 168.0) no description available & (reliability: 2376.0) & (original description: Putative BnaC04g39130D, Description = BnaC04g39130D protein, PFAM = PF04815;PF04811)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben101scf00451_396715-416771' '(at3g44340 : 1030.0) homologous to yeast and animal Sec24 proteins; expression in yeast cells enhances their survival under oxidative stress conditions.; clone eighty-four (CEF); FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: response to oxidative stress, vesicle-mediated transport; LOCATED IN: COPII vesicle coat, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT4G32640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37195 : 854.0) no description available & (gnl|cdd|34633 : 480.0) no description available & (reliability: 2060.0) & (original description: Putative At4g32640, Description = Protein transport protein Sec24-like At4g32640, PFAM = PF04811;PF00626;PF04810;PF04815;PF08033)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben101scf00486_353935-362035' '(at5g43670 : 1058.0) Sec23/Sec24 protein transport family protein; FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: intracellular protein transport, transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPII vesicle coat; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT3G23660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37197 : 903.0) no description available & (gnl|cdd|34652 : 681.0) no description available & (reliability: 2116.0) & (original description: Putative SEC23, Description = Protein transport protein SEC23, PFAM = PF00626;PF04810;PF04811;PF08033;PF04815)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben101scf00616_31486-43912' '(at3g27530 : 1028.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC6 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (225 aa) portion of the protein.; golgin candidate 6 (GC6); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, Golgi vesicle transport, vesicle fusion with Golgi apparatus; LOCATED IN: cytosol, Golgi apparatus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uso1/p115 like vesicle tethering protein, C-terminal (InterPro:IPR006955), Armadillo-type fold (InterPro:IPR016024), Uso1/p115 like vesicle tethering protein, head region (InterPro:IPR006953); Has 8674 Blast hits to 6651 proteins in 794 species: Archae - 167; Bacteria - 1154; Metazoa - 4083; Fungi - 784; Plants - 382; Viruses - 31; Other Eukaryotes - 2073 (source: NCBI BLink). & (gnl|cdd|36164 : 285.0) no description available & (gnl|cdd|68444 : 90.0) no description available & (reliability: 2056.0) & (original description: Putative GC6, Description = Golgin candidate 6, PFAM = PF04871;PF04869)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben101scf01188_574272-587549' '(at1g05520 : 1170.0) Sec23/Sec24 protein transport family protein; FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: response to salt stress, transport; LOCATED IN: COPII vesicle coat; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT3G23660.1); Has 1391 Blast hits to 1379 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 486; Fungi - 398; Plants - 318; Viruses - 0; Other Eukaryotes - 189 (source: NCBI BLink). & (gnl|cdd|37197 : 1084.0) no description available & (gnl|cdd|34652 : 755.0) no description available & (reliability: 2340.0) & (original description: Putative SEC23, Description = Protein transport protein SEC23, PFAM = PF04810;PF00626;PF04815;PF08033;PF04811)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben101scf01221_573079-580100' '(at3g24315 : 253.0) AtSec20; CONTAINS InterPro DOMAIN/s: Sec20 (InterPro:IPR005606); Has 291 Blast hits to 291 proteins in 130 species: Archae - 0; Bacteria - 0; Metazoa - 136; Fungi - 95; Plants - 46; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|67519 : 93.8) no description available & (reliability: 506.0) & (original description: Putative MpSEC20, Description = Secretion 20, PFAM = PF03908)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben101scf01221_575294-580735' '(at3g24315 : 157.0) AtSec20; CONTAINS InterPro DOMAIN/s: Sec20 (InterPro:IPR005606); Has 291 Blast hits to 291 proteins in 130 species: Archae - 0; Bacteria - 0; Metazoa - 136; Fungi - 95; Plants - 46; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|67519 : 97.3) no description available & (reliability: 314.0) & (original description: Putative SEC20, Description = Sec20 family protein, PFAM = PF03908)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben101scf01502_318517-337319' '(gnl|cdd|37197 : 1039.0) no description available & (at2g21630 : 1009.0) Sec23/Sec24 protein transport family protein; FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: intracellular protein transport, transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPII vesicle coat; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT4G14160.2); Has 1585 Blast hits to 1570 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 525; Fungi - 514; Plants - 334; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink). & (gnl|cdd|34652 : 761.0) no description available & (reliability: 2018.0) & (original description: Putative SEC23, Description = Protein transport protein SEC23, PFAM = PF04815;PF04810;PF00626;PF04811;PF08033)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben101scf01773_752188-760284' '(at4g01810 : 1210.0) Sec23/Sec24 protein transport family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular protein transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPII vesicle coat; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT2G21630.1); Has 8290 Blast hits to 5679 proteins in 621 species: Archae - 16; Bacteria - 1021; Metazoa - 2159; Fungi - 1153; Plants - 2353; Viruses - 447; Other Eukaryotes - 1141 (source: NCBI BLink). & (gnl|cdd|37197 : 576.0) no description available & (gnl|cdd|34652 : 196.0) no description available & (reliability: 2420.0) & (original description: Putative At4g01810, Description = Putative uncharacterized protein At4g01810, PFAM = PF08033;PF04815;PF04811;PF04810)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben101scf02223_698971-703228' '(at3g18480 : 167.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component, known as a golgin in mammals and yeast. A fluorescently-tagged version of CASP co-localizes with Golgi markers, and this localization appears to require the C-terminal (565ñ689aa) portion of the protein. The protein is inserted into a membrane in a type II orientation.; CCAAT-displacement protein alternatively spliced product (CASP); INVOLVED IN: intra-Golgi vesicle-mediated transport; LOCATED IN: integral to membrane, Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CASP, C-terminal (InterPro:IPR012955); Has 108439 Blast hits to 62245 proteins in 2877 species: Archae - 1242; Bacteria - 16953; Metazoa - 49041; Fungi - 8922; Plants - 5181; Viruses - 394; Other Eukaryotes - 26706 (source: NCBI BLink). & (gnl|cdd|36181 : 134.0) no description available & (reliability: 334.0) & (original description: Putative CASP, Description = Protein CASP, PFAM = )' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben101scf02846_72159-75611' '(at3g58170 : 142.0) Encodes a Bet1/Sft1-like SNARE protein which fully suppresses the temperature-sensitive growth defect in sft1-1 yeast cells; however, it cannot support the deletion of the yeast BET1 gene (bet1Δ).; BET1P/SFT1P-like protein 14A (BS14A); FUNCTIONS IN: protein transporter activity, SNAP receptor activity; INVOLVED IN: ER to Golgi vesicle-mediated transport; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: Target SNARE coiled-coil domain protein (TAIR:AT4G14455.1); Has 354 Blast hits to 353 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 212; Fungi - 20; Plants - 86; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|38595 : 102.0) no description available & (reliability: 284.0) & (original description: Putative BET11, Description = Bet1-like SNARE 1-1, PFAM = )' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben101scf06263_130074-149923' '(at5g66030 : 503.0) Involved in golgi protein trafficking. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner. Localized to the golgi apparatus, tyrosine 717 in AtGRIP is crucial for Golgi localization.; ATGRIP; CONTAINS InterPro DOMAIN/s: GRIP (InterPro:IPR000237); Has 226693 Blast hits to 107013 proteins in 3750 species: Archae - 2739; Bacteria - 54726; Metazoa - 91166; Fungi - 18242; Plants - 12768; Viruses - 908; Other Eukaryotes - 46144 (source: NCBI BLink). & (gnl|cdd|35383 : 83.7) no description available & (reliability: 1006.0) & (original description: Putative GRIP, Description = Protein GRIP, PFAM = PF01465)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben101scf06861_87812-90937' '(gnl|cdd|37195 : 178.0) no description available & (at3g44340 : 166.0) homologous to yeast and animal Sec24 proteins; expression in yeast cells enhances their survival under oxidative stress conditions.; clone eighty-four (CEF); FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: response to oxidative stress, vesicle-mediated transport; LOCATED IN: COPII vesicle coat, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT4G32640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34633 : 99.7) no description available & (reliability: 332.0) & (original description: Putative CEF, Description = Protein transport protein Sec24-like CEF, PFAM = PF00626;PF04815)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben101scf06861_91017-101579' '(at3g44340 : 759.0) homologous to yeast and animal Sec24 proteins; expression in yeast cells enhances their survival under oxidative stress conditions.; clone eighty-four (CEF); FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: response to oxidative stress, vesicle-mediated transport; LOCATED IN: COPII vesicle coat, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT4G32640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37195 : 603.0) no description available & (gnl|cdd|34633 : 333.0) no description available & (reliability: 1518.0) & (original description: Putative CEF, Description = Protein transport protein Sec24-like CEF, PFAM = PF08033;PF04810;PF04811)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben101scf07664_139229-149936' '(at3g07100 : 1150.0) Encodes SEC24a/ERMO2. Required for endoplasmic reticulum (ER) morphology.; ENDOPLASMIC RETICULUM MORPHOLOGY 2 (ERMO2); FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: transport, ER body organization; LOCATED IN: COPII vesicle coat; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: clone eighty-four (TAIR:AT3G44340.1); Has 86818 Blast hits to 46504 proteins in 1607 species: Archae - 60; Bacteria - 12149; Metazoa - 40940; Fungi - 13838; Plants - 8598; Viruses - 2013; Other Eukaryotes - 9220 (source: NCBI BLink). & (gnl|cdd|37196 : 799.0) no description available & (gnl|cdd|34633 : 508.0) no description available & (reliability: 2300.0) & (original description: Putative At3g07100, Description = Protein transport protein Sec24-like At3g07100, PFAM = PF08033;PF04810;PF04811;PF04815)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben101scf08700_36282-40856' '(at3g58170 : 149.0) Encodes a Bet1/Sft1-like SNARE protein which fully suppresses the temperature-sensitive growth defect in sft1-1 yeast cells; however, it cannot support the deletion of the yeast BET1 gene (bet1Δ).; BET1P/SFT1P-like protein 14A (BS14A); FUNCTIONS IN: protein transporter activity, SNAP receptor activity; INVOLVED IN: ER to Golgi vesicle-mediated transport; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: Target SNARE coiled-coil domain protein (TAIR:AT4G14455.1); Has 354 Blast hits to 353 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 212; Fungi - 20; Plants - 86; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|38595 : 103.0) no description available & (reliability: 298.0) & (original description: Putative BET11, Description = Bet1-like SNARE 1-1, PFAM = )' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben101scf10630_94087-120861' '(at1g73430 : 1131.0) sec34-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: chloroplast, cis-Golgi network, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec34-like protein (InterPro:IPR007265); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37815 : 630.0) no description available & (gnl|cdd|67740 : 117.0) no description available & (reliability: 2262.0) & (original description: Putative At1g73430, Description = Sec34-like protein, PFAM = PF04136)' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben101scf11125_46264-55015' '(at4g14455 : 150.0) Encodes a Bet1/Sft1-like SNARE protein, which can only partially suppresses the temperature-sensitive growth defect in sft1-1 yeast cells; however, it cannot support the deletion of the yeast BET1 gene (bet1Δ). In yeast, Bet1p is the v-SNARE (soluble N-ethylmaleimide-sensitive factor adaptor protein receptor, V-type) involved in trafficking between the ER and Golgi.; ATBET12; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: BET1P/SFT1P-like protein 14A (TAIR:AT3G58170.1); Has 338 Blast hits to 337 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 35; Plants - 128; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|38595 : 108.0) no description available & (reliability: 300.0) & (original description: Putative BET12, Description = Bet1-like SNARE 1-2, PFAM = )' T '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'niben101scf12994_52714-68992' '(at3g18480 : 759.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component, known as a golgin in mammals and yeast. A fluorescently-tagged version of CASP co-localizes with Golgi markers, and this localization appears to require the C-terminal (565ñ689aa) portion of the protein. The protein is inserted into a membrane in a type II orientation.; CCAAT-displacement protein alternatively spliced product (CASP); INVOLVED IN: intra-Golgi vesicle-mediated transport; LOCATED IN: integral to membrane, Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CASP, C-terminal (InterPro:IPR012955); Has 108439 Blast hits to 62245 proteins in 2877 species: Archae - 1242; Bacteria - 16953; Metazoa - 49041; Fungi - 8922; Plants - 5181; Viruses - 394; Other Eukaryotes - 26706 (source: NCBI BLink). & (gnl|cdd|36181 : 489.0) no description available & (gnl|cdd|71607 : 201.0) no description available & (reliability: 1518.0) & (original description: Putative CASP, Description = Protein CASP, PFAM = PF08172)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'nbv0.3scaffold3488_30221-34894' '(at3g11530 : 163.0) Vacuolar protein sorting 55 (VPS55) family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting 55 (InterPro:IPR007262); BEST Arabidopsis thaliana protein match is: Vacuolar protein sorting 55 (VPS55) family protein (TAIR:AT1G32410.5); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37385 : 121.0) no description available & (gnl|cdd|86556 : 89.8) no description available & (reliability: 326.0) & (original description: Putative pco110662, Description = Vacuolar protein sorting 55 containing protein, PFAM = PF04133)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'nbv0.3scaffold13677_1-5904' '(at5g04920 : 502.0) EAP30/Vps36 family protein; CONTAINS InterPro DOMAIN/s: EAP30 (InterPro:IPR007286), Vacuolar protein sorting protein, Vps36 (InterPro:IPR021648); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37971 : 313.0) no description available & (gnl|cdd|86563 : 155.0) no description available & (reliability: 1004.0) & (original description: Putative VPS36, Description = Vacuolar protein sorting-associated protein 36, PFAM = PF04157;PF11605)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'nbv0.3scaffold16028_30864-36498' '(gnl|cdd|36562 : 585.0) no description available & (p49043|vpe_citsi : 578.0) Vacuolar-processing enzyme precursor (EC 3.4.22.-) (VPE) - Citrus sinensis (Sweet orange) & (at4g32940 : 574.0) Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions. They are essential in processing seed storage proteins and for mediating the susceptible response of toxin-induced cell death.; gamma vacuolar processing enzyme (GAMMA-VPE); CONTAINS InterPro DOMAIN/s: Peptidase C13, legumain (InterPro:IPR001096); BEST Arabidopsis thaliana protein match is: alpha-vacuolar processing enzyme (TAIR:AT2G25940.1); Has 789 Blast hits to 787 proteins in 239 species: Archae - 4; Bacteria - 12; Metazoa - 277; Fungi - 115; Plants - 257; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|85592 : 405.0) no description available & (reliability: 1148.0) & (original description: Putative bVPE, Description = Vacuolar-processing enzyme, PFAM = PF01650)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'nbv0.3scaffold28000_6200-13693' '(at3g19770 : 451.0) Guanine nucleotide exchange factor VPS9a. Can ctivate all Rab5 members to GTP-bound forms in vitro. Required for embryogenesis. Regulates the localization of ARA7 and ARA6. Involved in postembryonic root development.; VPS9A; FUNCTIONS IN: Rho guanyl-nucleotide exchange factor activity; INVOLVED IN: cell plate assembly, transport, cell wall biogenesis, post-embryonic root development, embryo development; LOCATED IN: cytosol, nucleus, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar sorting protein 9, subgroup (InterPro:IPR013995), Vacuolar sorting protein 9 (InterPro:IPR003123); BEST Arabidopsis thaliana protein match is: Vacuolar sorting protein 9 (VPS9) domain (TAIR:AT5G09320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37530 : 180.0) no description available & (gnl|cdd|85907 : 126.0) no description available & (reliability: 902.0) & (original description: Putative VPS9, Description = Vacuolar protein sorting-associated protein 9A, PFAM = PF02204)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'nbv0.3scaffold35141_7913-15767' '(o24325|vpe1_phavu : 496.0) Vacuolar-processing enzyme precursor (EC 3.4.22.-) (VPE) (Legumain-like proteinase) (LLP) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g32940 : 474.0) Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions. They are essential in processing seed storage proteins and for mediating the susceptible response of toxin-induced cell death.; gamma vacuolar processing enzyme (GAMMA-VPE); CONTAINS InterPro DOMAIN/s: Peptidase C13, legumain (InterPro:IPR001096); BEST Arabidopsis thaliana protein match is: alpha-vacuolar processing enzyme (TAIR:AT2G25940.1); Has 789 Blast hits to 787 proteins in 239 species: Archae - 4; Bacteria - 12; Metazoa - 277; Fungi - 115; Plants - 257; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36562 : 462.0) no description available & (gnl|cdd|85592 : 197.0) no description available & (reliability: 948.0) & (original description: Putative bVPE, Description = Vacuolar-processing enzyme, PFAM = PF01650)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'nbv0.3scaffold45983_9037-14411' '(at3g46870 : 107.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G62350.1); Has 7906 Blast hits to 3591 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 82; Plants - 7752; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative , Description = , PFAM = PF13041;PF01535)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'nbv0.3scaffold54992_8039-11081' '(at1g09070 : 104.0) SRC2 specifically binds the peptide PIEPPPHH, and moves from ER to a vacuole fraction where it gets internalized. Involved in Protein Storage Vacuole targeting.; soybean gene regulated by cold-2 (SRC2); CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G16510.1); Has 25146 Blast hits to 15856 proteins in 1076 species: Archae - 6; Bacteria - 3010; Metazoa - 13770; Fungi - 3151; Plants - 2962; Viruses - 83; Other Eukaryotes - 2164 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative SRC2, Description = Soybean gene regulated by cold-2, putative, PFAM = PF00168)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'nbv0.3scaffold62920_2073-7434' '(at3g19770 : 282.0) Guanine nucleotide exchange factor VPS9a. Can ctivate all Rab5 members to GTP-bound forms in vitro. Required for embryogenesis. Regulates the localization of ARA7 and ARA6. Involved in postembryonic root development.; VPS9A; FUNCTIONS IN: Rho guanyl-nucleotide exchange factor activity; INVOLVED IN: cell plate assembly, transport, cell wall biogenesis, post-embryonic root development, embryo development; LOCATED IN: cytosol, nucleus, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar sorting protein 9, subgroup (InterPro:IPR013995), Vacuolar sorting protein 9 (InterPro:IPR003123); BEST Arabidopsis thaliana protein match is: Vacuolar sorting protein 9 (VPS9) domain (TAIR:AT5G09320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37530 : 111.0) no description available & (reliability: 564.0) & (original description: Putative VPS9, Description = Vacuolar protein sorting-associated protein 9A, PFAM = PF02204)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'nbv0.3scaffold69330_4560-9463' '(at3g54860 : 394.0) Homologous to yeast VPS33. Forms a complex with VCL1 and AtVPS11. Involved in vacuolar biogenesis.; ATVPS33; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting 45 (TAIR:AT1G77140.1); Has 1433 Blast hits to 1411 proteins in 217 species: Archae - 0; Bacteria - 0; Metazoa - 612; Fungi - 387; Plants - 135; Viruses - 0; Other Eukaryotes - 299 (source: NCBI BLink). & (gnl|cdd|36516 : 257.0) no description available & (gnl|cdd|85171 : 109.0) no description available & (reliability: 788.0) & (original description: Putative VPS33, Description = Sec1-like protein, PFAM = PF00995)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'nbv0.5scaffold39_240356-250921' '(p49043|vpe_citsi : 766.0) Vacuolar-processing enzyme precursor (EC 3.4.22.-) (VPE) - Citrus sinensis (Sweet orange) & (at4g32940 : 731.0) Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions. They are essential in processing seed storage proteins and for mediating the susceptible response of toxin-induced cell death.; gamma vacuolar processing enzyme (GAMMA-VPE); CONTAINS InterPro DOMAIN/s: Peptidase C13, legumain (InterPro:IPR001096); BEST Arabidopsis thaliana protein match is: alpha-vacuolar processing enzyme (TAIR:AT2G25940.1); Has 789 Blast hits to 787 proteins in 239 species: Archae - 4; Bacteria - 12; Metazoa - 277; Fungi - 115; Plants - 257; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36562 : 702.0) no description available & (gnl|cdd|85592 : 401.0) no description available & (reliability: 1462.0) & (original description: Putative bVPE, Description = Vacuolar-processing enzyme, PFAM = PF01650)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'nbv0.5scaffold76_461401-466775' '(at3g46870 : 107.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G62350.1); Has 7906 Blast hits to 3591 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 82; Plants - 7752; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative , Description = , PFAM = PF01535;PF13041)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'nbv0.5scaffold396_512353-517628' '(gnl|cdd|36562 : 578.0) no description available & (p49043|vpe_citsi : 533.0) Vacuolar-processing enzyme precursor (EC 3.4.22.-) (VPE) - Citrus sinensis (Sweet orange) & (at4g32940 : 513.0) Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions. They are essential in processing seed storage proteins and for mediating the susceptible response of toxin-induced cell death.; gamma vacuolar processing enzyme (GAMMA-VPE); CONTAINS InterPro DOMAIN/s: Peptidase C13, legumain (InterPro:IPR001096); BEST Arabidopsis thaliana protein match is: alpha-vacuolar processing enzyme (TAIR:AT2G25940.1); Has 789 Blast hits to 787 proteins in 239 species: Archae - 4; Bacteria - 12; Metazoa - 277; Fungi - 115; Plants - 257; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|85592 : 391.0) no description available & (reliability: 1026.0) & (original description: Putative pb3, Description = Putative legumain, PFAM = PF01650)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'nbv0.5scaffold396_543721-565022' '(gnl|cdd|36562 : 283.0) no description available & (at2g25940 : 255.0) Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions.; alpha-vacuolar processing enzyme (ALPHA-VPE); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis, vacuolar protein processing; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase C13, legumain (InterPro:IPR001096); BEST Arabidopsis thaliana protein match is: gamma vacuolar processing enzyme (TAIR:AT4G32940.1); Has 793 Blast hits to 791 proteins in 239 species: Archae - 4; Bacteria - 12; Metazoa - 278; Fungi - 115; Plants - 259; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (p49047|vpea_arath : 255.0) Vacuolar-processing enzyme alpha-isozyme precursor (EC 3.4.22.-) (Alpha-VPE) - Arabidopsis thaliana (Mouse-ear cress) & (gnl|cdd|85592 : 247.0) no description available & (reliability: 510.0) & (original description: Putative bVPE, Description = Vacuolar-processing enzyme, PFAM = PF01650)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'nbv0.5scaffold396_749292-753736' '(o24325|vpe1_phavu : 469.0) Vacuolar-processing enzyme precursor (EC 3.4.22.-) (VPE) (Legumain-like proteinase) (LLP) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g32940 : 442.0) Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions. They are essential in processing seed storage proteins and for mediating the susceptible response of toxin-induced cell death.; gamma vacuolar processing enzyme (GAMMA-VPE); CONTAINS InterPro DOMAIN/s: Peptidase C13, legumain (InterPro:IPR001096); BEST Arabidopsis thaliana protein match is: alpha-vacuolar processing enzyme (TAIR:AT2G25940.1); Has 789 Blast hits to 787 proteins in 239 species: Archae - 4; Bacteria - 12; Metazoa - 277; Fungi - 115; Plants - 257; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36562 : 434.0) no description available & (gnl|cdd|85592 : 198.0) no description available & (reliability: 884.0) & (original description: Putative bVPE, Description = Vacuolar-processing enzyme, PFAM = PF01650)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'nbv0.5scaffold595_151609-182858' '(at2g38020 : 1259.0) necessary for proper vacuole formation and morphogenesis in Arabidopsis; VACUOLELESS 1 (VCL1); CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Vps16, N-terminal (InterPro:IPR006926), Vacuolar protein sorting-associated protein 16 (InterPro:IPR016534), Vps16, C-terminal (InterPro:IPR006925); Has 455 Blast hits to 406 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 134; Plants - 46; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (gnl|cdd|37491 : 767.0) no description available & (gnl|cdd|68416 : 232.0) no description available & (reliability: 2518.0) & (original description: Putative VCL1, Description = Protein VACUOLELESS1, PFAM = PF04841;PF04840)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'nbv0.5scaffold1575_28927-31808' '(at1g09070 : 104.0) SRC2 specifically binds the peptide PIEPPPHH, and moves from ER to a vacuole fraction where it gets internalized. Involved in Protein Storage Vacuole targeting.; soybean gene regulated by cold-2 (SRC2); CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G16510.1); Has 25146 Blast hits to 15856 proteins in 1076 species: Archae - 6; Bacteria - 3010; Metazoa - 13770; Fungi - 3151; Plants - 2962; Viruses - 83; Other Eukaryotes - 2164 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative SRC2, Description = Protein SRC2, PFAM = PF00168)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'nbv0.5scaffold1605_139462-155201' '(at1g75850 : 1008.0) VPS35 homolog B (VPS35B); CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 35 (InterPro:IPR005378); BEST Arabidopsis thaliana protein match is: VPS35 homolog A (TAIR:AT2G17790.1); Has 618 Blast hits to 508 proteins in 209 species: Archae - 0; Bacteria - 1; Metazoa - 191; Fungi - 219; Plants - 72; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|36323 : 903.0) no description available & (gnl|cdd|86391 : 827.0) no description available & (reliability: 2016.0) & (original description: Putative VPS35B, Description = Vacuolar protein sorting-associated protein 35B, PFAM = PF03635)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'nbv0.5scaffold2635_1899-15071' '(at5g06140 : 208.0) Homolog of yeast retromer subunit VPS5. Part of a retromer-like protein complex involved in endosome to lysosome protein transport. In roots it co-localizes with the PIN2 auxin efflux carrier. Involved in endocytic sorting of membrane proteins including PIN2, BOR1 and BRI1.; sorting nexin 1 (SNX1); FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: in 7 processes; LOCATED IN: endosome, microsome, retromer complex, membrane, multivesicular body; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2B (TAIR:AT5G07120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37484 : 126.0) no description available & (gnl|cdd|85027 : 93.1) no description available & (reliability: 416.0) & (original description: Putative SNX1, Description = Sorting nexin 1, PFAM = PF00787;PF09325)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'nbv0.5scaffold2754_42966-47909' '(at2g38020 : 614.0) necessary for proper vacuole formation and morphogenesis in Arabidopsis; VACUOLELESS 1 (VCL1); CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Vps16, N-terminal (InterPro:IPR006926), Vacuolar protein sorting-associated protein 16 (InterPro:IPR016534), Vps16, C-terminal (InterPro:IPR006925); Has 455 Blast hits to 406 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 134; Plants - 46; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (gnl|cdd|37491 : 413.0) no description available & (gnl|cdd|68416 : 234.0) no description available & (reliability: 1228.0) & (original description: Putative Os01g0666800, Description = Os01g0666800 protein, PFAM = PF04841)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'nbv0.5scaffold6832_6339-19462' '(at4g27690 : 528.0) vacuolar protein sorting 26B (VPS26B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport, vacuolar transport, retrograde transport, endosome to Golgi; LOCATED IN: retromer complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 26 (InterPro:IPR005377); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting 26A (TAIR:AT5G53530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38273 : 472.0) no description available & (gnl|cdd|67271 : 394.0) no description available & (reliability: 1056.0) & (original description: Putative VPS26A, Description = Vacuolar protein sorting-associated protein 26A, PFAM = PF03643)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben044scf00000806ctg014_13278-18762' '(at5g04920 : 494.0) EAP30/Vps36 family protein; CONTAINS InterPro DOMAIN/s: EAP30 (InterPro:IPR007286), Vacuolar protein sorting protein, Vps36 (InterPro:IPR021648); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37971 : 323.0) no description available & (gnl|cdd|86563 : 156.0) no description available & (reliability: 988.0) & (original description: Putative VPS36, Description = Vacuolar protein sorting-associated protein 36, PFAM = PF04157;PF11605)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben044scf00003359ctg020_39498-41526' '(at4g19003 : 309.0) VPS25; CONTAINS InterPro DOMAIN/s: ESCRT-II complex, vps25 subunit, N-terminal winged helix (InterPro:IPR014041), ESCRT-II complex, vps25 subunit, C-terminal winged helix (InterPro:IPR014040), ESCRT-II complex, vps25 subunit (InterPro:IPR008570); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86968 : 216.0) no description available & (gnl|cdd|39271 : 141.0) no description available & (reliability: 618.0) & (original description: Putative VPS25, Description = Vacuolar protein sorting-associated protein 25, PFAM = PF05871)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben044scf00004165ctg001_1-12097' '(at1g77140 : 721.0) A peripheral membrane protein that associates with microsomal membranes, likely to function in the transport of proteins to the vacuole. It is a member of Sec1p protein family. It may be involved in the regulation of vesicle fusion reactions through interaction with t-SNAREs at the Golgi trans face.; vacuolar protein sorting 45 (VPS45); CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: secretory 1A (TAIR:AT1G02010.1); Has 1795 Blast hits to 1777 proteins in 228 species: Archae - 0; Bacteria - 2; Metazoa - 694; Fungi - 525; Plants - 216; Viruses - 0; Other Eukaryotes - 358 (source: NCBI BLink). & (gnl|cdd|36513 : 578.0) no description available & (gnl|cdd|85171 : 299.0) no description available & (q5vnu3|sec1b_orysa : 94.4) Probable protein transport Sec1b - Oryza sativa (Rice) & (reliability: 1442.0) & (original description: Putative VPS45, Description = Vacuolar protein sorting-associated protein 45 homolog, PFAM = PF00995)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben044scf00012308ctg011_7260-14203' '(at4g05000 : 319.0) vacuolar protein sorting-associated protein 28 homolog 1 (VPS28-1); CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated, VPS28, N-terminal (InterPro:IPR017898), Vacuolar protein sorting-associated, VPS28, C-terminal (InterPro:IPR017899), Vacuolar protein sorting-associated, VPS28 (InterPro:IPR007143); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting-associated protein 28 homolog 1 (TAIR:AT4G21560.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38494 : 293.0) no description available & (gnl|cdd|67606 : 245.0) no description available & (reliability: 616.0) & (original description: Putative vps28, Description = Vacuolar protein sorting-associated protein 28, PFAM = PF03997)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben044scf00014486ctg004_1137-4242' '(at1g09070 : 104.0) SRC2 specifically binds the peptide PIEPPPHH, and moves from ER to a vacuole fraction where it gets internalized. Involved in Protein Storage Vacuole targeting.; soybean gene regulated by cold-2 (SRC2); CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G16510.1); Has 25146 Blast hits to 15856 proteins in 1076 species: Archae - 6; Bacteria - 3010; Metazoa - 13770; Fungi - 3151; Plants - 2962; Viruses - 83; Other Eukaryotes - 2164 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative SRC2, Description = Protein SRC2, PFAM = PF00168)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben044scf00030610ctg006_3213-12847' '(at1g75850 : 812.0) VPS35 homolog B (VPS35B); CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 35 (InterPro:IPR005378); BEST Arabidopsis thaliana protein match is: VPS35 homolog A (TAIR:AT2G17790.1); Has 618 Blast hits to 508 proteins in 209 species: Archae - 0; Bacteria - 1; Metazoa - 191; Fungi - 219; Plants - 72; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|36323 : 622.0) no description available & (gnl|cdd|86391 : 517.0) no description available & (reliability: 1624.0) & (original description: Putative ZIP3, Description = Vacuolar protein sorting-associated protein 35, PFAM = PF03635)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben044scf00030610ctg011_557-3339' '(gnl|cdd|36323 : 209.0) no description available & (gnl|cdd|86391 : 198.0) no description available & (at2g17790 : 184.0) Encodes a protein with similarity to yeast VPS35 which encodes a component of the retromer involved in retrograde endosomal transport. Mutants partially suppress the loss of VTI11 function in Arabidopsis and restores gravitropism in the double mutant.; VPS35 homolog A (VPS35A); CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 35 (InterPro:IPR005378); BEST Arabidopsis thaliana protein match is: VPS35 homolog B (TAIR:AT1G75850.1); Has 618 Blast hits to 509 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 194; Fungi - 224; Plants - 73; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative vps35, Description = Vacuolar protein sorting-associated protein 35, PFAM = PF03635)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben044scf00031651ctg001_14867-24521' '(at1g75850 : 811.0) VPS35 homolog B (VPS35B); CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 35 (InterPro:IPR005378); BEST Arabidopsis thaliana protein match is: VPS35 homolog A (TAIR:AT2G17790.1); Has 618 Blast hits to 508 proteins in 209 species: Archae - 0; Bacteria - 1; Metazoa - 191; Fungi - 219; Plants - 72; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|36323 : 739.0) no description available & (gnl|cdd|86391 : 671.0) no description available & (reliability: 1622.0) & (original description: Putative VPS35, Description = VPS35, PFAM = PF03635)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben044scf00033026ctg003_1-6845' '(at3g19770 : 427.0) Guanine nucleotide exchange factor VPS9a. Can ctivate all Rab5 members to GTP-bound forms in vitro. Required for embryogenesis. Regulates the localization of ARA7 and ARA6. Involved in postembryonic root development.; VPS9A; FUNCTIONS IN: Rho guanyl-nucleotide exchange factor activity; INVOLVED IN: cell plate assembly, transport, cell wall biogenesis, post-embryonic root development, embryo development; LOCATED IN: cytosol, nucleus, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar sorting protein 9, subgroup (InterPro:IPR013995), Vacuolar sorting protein 9 (InterPro:IPR003123); BEST Arabidopsis thaliana protein match is: Vacuolar sorting protein 9 (VPS9) domain (TAIR:AT5G09320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37530 : 164.0) no description available & (gnl|cdd|85907 : 110.0) no description available & (reliability: 854.0) & (original description: Putative VPS9A, Description = Vacuolar protein sorting-associated protein 9A, PFAM = PF02204)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben044scf00043187ctg000_1-7743' '(at2g14740 : 1013.0) Encodes a vacuolar sorting receptor that participates in vacuolar sorting in vegetative tissues and in seeds.; vaculolar sorting receptor 3 (VSR3); FUNCTIONS IN: calcium ion binding; INVOLVED IN: intracellular protein transport, protein targeting to vacuole; LOCATED IN: integral to plasma membrane, Golgi transport complex, membrane; EXPRESSED IN: callus, leaf; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-like (InterPro:IPR006210), Growth factor, receptor (InterPro:IPR009030), EGF-like region, conserved site (InterPro:IPR013032); BEST Arabidopsis thaliana protein match is: vacuolar sorting receptor 4 (TAIR:AT2G14720.2); Has 14459 Blast hits to 6347 proteins in 253 species: Archae - 2; Bacteria - 131; Metazoa - 13188; Fungi - 10; Plants - 479; Viruses - 0; Other Eukaryotes - 649 (source: NCBI BLink). & (p93484|vsr1_pea : 992.0) Vacuolar sorting receptor 1 precursor (BP-80) (80 kDa proaleurein-binding protein) - Pisum sativum (Garden pea) & (gnl|cdd|80347 : 201.0) no description available & (reliability: 2026.0) & (original description: Putative VSR3, Description = Vacuolar-sorting receptor 3, PFAM = PF12662;PF02225)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben044scf00052630ctg003_1-2834' '(at1g09070 : 105.0) SRC2 specifically binds the peptide PIEPPPHH, and moves from ER to a vacuole fraction where it gets internalized. Involved in Protein Storage Vacuole targeting.; soybean gene regulated by cold-2 (SRC2); CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G16510.1); Has 25146 Blast hits to 15856 proteins in 1076 species: Archae - 6; Bacteria - 3010; Metazoa - 13770; Fungi - 3151; Plants - 2962; Viruses - 83; Other Eukaryotes - 2164 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative SRC2, Description = Protein SRC2, PFAM = PF00168)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf00083_268974-271603' '(at4g05000 : 308.0) vacuolar protein sorting-associated protein 28 homolog 1 (VPS28-1); CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated, VPS28, N-terminal (InterPro:IPR017898), Vacuolar protein sorting-associated, VPS28, C-terminal (InterPro:IPR017899), Vacuolar protein sorting-associated, VPS28 (InterPro:IPR007143); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting-associated protein 28 homolog 1 (TAIR:AT4G21560.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38494 : 284.0) no description available & (gnl|cdd|67606 : 240.0) no description available & (reliability: 592.0) & (original description: Putative vps28, Description = Vacuolar protein sorting-associated protein 28, PFAM = PF03997)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf00144_69404-76848' '(at3g11530 : 191.0) Vacuolar protein sorting 55 (VPS55) family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting 55 (InterPro:IPR007262); BEST Arabidopsis thaliana protein match is: Vacuolar protein sorting 55 (VPS55) family protein (TAIR:AT1G32410.5); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37385 : 128.0) no description available & (gnl|cdd|86556 : 95.6) no description available & (reliability: 382.0) & (original description: Putative VPS55, Description = Vacuolar trafficking protein, PFAM = PF04133)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf00369_217682-220563' '(at1g09070 : 106.0) SRC2 specifically binds the peptide PIEPPPHH, and moves from ER to a vacuole fraction where it gets internalized. Involved in Protein Storage Vacuole targeting.; soybean gene regulated by cold-2 (SRC2); CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G16510.1); Has 25146 Blast hits to 15856 proteins in 1076 species: Archae - 6; Bacteria - 3010; Metazoa - 13770; Fungi - 3151; Plants - 2962; Viruses - 83; Other Eukaryotes - 2164 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative SRC2, Description = Protein SRC2, PFAM = PF00168)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf00369_253345-256316' '(at1g09070 : 104.0) SRC2 specifically binds the peptide PIEPPPHH, and moves from ER to a vacuole fraction where it gets internalized. Involved in Protein Storage Vacuole targeting.; soybean gene regulated by cold-2 (SRC2); CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G16510.1); Has 25146 Blast hits to 15856 proteins in 1076 species: Archae - 6; Bacteria - 3010; Metazoa - 13770; Fungi - 3151; Plants - 2962; Viruses - 83; Other Eukaryotes - 2164 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative SRC2, Description = Soybean gene regulated by cold-2, putative, PFAM = PF00168)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf00420_621834-631674' '(at4g27690 : 534.0) vacuolar protein sorting 26B (VPS26B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport, vacuolar transport, retrograde transport, endosome to Golgi; LOCATED IN: retromer complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 26 (InterPro:IPR005377); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting 26A (TAIR:AT5G53530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38273 : 479.0) no description available & (gnl|cdd|67271 : 399.0) no description available & (reliability: 1068.0) & (original description: Putative VPS26A, Description = Vacuolar protein sorting-associated protein 26A, PFAM = PF03643)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf00972_180321-195989' '(at1g77140 : 805.0) A peripheral membrane protein that associates with microsomal membranes, likely to function in the transport of proteins to the vacuole. It is a member of Sec1p protein family. It may be involved in the regulation of vesicle fusion reactions through interaction with t-SNAREs at the Golgi trans face.; vacuolar protein sorting 45 (VPS45); CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: secretory 1A (TAIR:AT1G02010.1); Has 1795 Blast hits to 1777 proteins in 228 species: Archae - 0; Bacteria - 2; Metazoa - 694; Fungi - 525; Plants - 216; Viruses - 0; Other Eukaryotes - 358 (source: NCBI BLink). & (gnl|cdd|36513 : 623.0) no description available & (gnl|cdd|85171 : 298.0) no description available & (reliability: 1610.0) & (original description: Putative VPS45, Description = Vacuolar protein sorting-associated protein 45 homolog, PFAM = PF00995;PF00995)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf01374_1479128-1490979' '(at2g38020 : 1294.0) necessary for proper vacuole formation and morphogenesis in Arabidopsis; VACUOLELESS 1 (VCL1); CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Vps16, N-terminal (InterPro:IPR006926), Vacuolar protein sorting-associated protein 16 (InterPro:IPR016534), Vps16, C-terminal (InterPro:IPR006925); Has 455 Blast hits to 406 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 134; Plants - 46; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (gnl|cdd|37491 : 784.0) no description available & (gnl|cdd|68416 : 235.0) no description available & (reliability: 2588.0) & (original description: Putative VCL1, Description = Protein VACUOLELESS1, PFAM = PF04841;PF04840)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf01374_1484212-1487896' '(at2g38020 : 350.0) necessary for proper vacuole formation and morphogenesis in Arabidopsis; VACUOLELESS 1 (VCL1); CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Vps16, N-terminal (InterPro:IPR006926), Vacuolar protein sorting-associated protein 16 (InterPro:IPR016534), Vps16, C-terminal (InterPro:IPR006925); Has 455 Blast hits to 406 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 134; Plants - 46; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (gnl|cdd|37491 : 158.0) no description available & (gnl|cdd|68415 : 91.2) no description available & (reliability: 700.0) & (original description: Putative VCL1, Description = Vacuolar protein sorting-associated protein 16-like protein, PFAM = PF04840)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf01411_170907-177226' '(at3g47700 : 850.0) Involved in transportation of seed storage proteins from the ER to the vacuole. Mutant seed cell accumulates the precursors of 12S globulin and 2S albumin instead of the vacuolar-located mature proteins.; maigo2 (MAG2); CONTAINS InterPro DOMAIN/s: RINT-1/TIP-1 (InterPro:IPR007528); BEST Arabidopsis thaliana protein match is: RINT-1 / TIP-1 family (TAIR:AT1G08400.1); Has 297 Blast hits to 297 proteins in 143 species: Archae - 16; Bacteria - 48; Metazoa - 107; Fungi - 71; Plants - 47; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|37429 : 449.0) no description available & (gnl|cdd|68026 : 313.0) no description available & (reliability: 1700.0) & (original description: Putative MAG2, Description = RINT1-like protein MAG2, PFAM = PF04437)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf01689_383021-385851' '(at1g09070 : 99.0) SRC2 specifically binds the peptide PIEPPPHH, and moves from ER to a vacuole fraction where it gets internalized. Involved in Protein Storage Vacuole targeting.; soybean gene regulated by cold-2 (SRC2); CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G16510.1); Has 25146 Blast hits to 15856 proteins in 1076 species: Archae - 6; Bacteria - 3010; Metazoa - 13770; Fungi - 3151; Plants - 2962; Viruses - 83; Other Eukaryotes - 2164 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative PGSC0003DMG400004506, Description = Soybean gene regulated by cold-2, putative, PFAM = PF00168)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf01702_224953-251503' '(at1g75850 : 1215.0) VPS35 homolog B (VPS35B); CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 35 (InterPro:IPR005378); BEST Arabidopsis thaliana protein match is: VPS35 homolog A (TAIR:AT2G17790.1); Has 618 Blast hits to 508 proteins in 209 species: Archae - 0; Bacteria - 1; Metazoa - 191; Fungi - 219; Plants - 72; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|36323 : 1011.0) no description available & (gnl|cdd|86391 : 934.0) no description available & (reliability: 2430.0) & (original description: Putative VPS35B, Description = Vacuolar protein sorting-associated protein 35B, PFAM = PF03635;PF03635)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf02077_1157923-1223181' '(at1g12470 : 1628.0) zinc ion binding; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pep3/Vps18/deep orange (InterPro:IPR007810), Zinc finger, RING-type (InterPro:IPR001841); Has 495 Blast hits to 471 proteins in 206 species: Archae - 0; Bacteria - 2; Metazoa - 170; Fungi - 162; Plants - 42; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (gnl|cdd|37245 : 913.0) no description available & (gnl|cdd|68696 : 146.0) no description available & (reliability: 3256.0) & (original description: Putative At1g12470, Description = Zinc ion binding protein, PFAM = PF00637;PF05131)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf02167_147978-155990' '(at5g04920 : 514.0) EAP30/Vps36 family protein; CONTAINS InterPro DOMAIN/s: EAP30 (InterPro:IPR007286), Vacuolar protein sorting protein, Vps36 (InterPro:IPR021648); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37971 : 329.0) no description available & (gnl|cdd|86563 : 158.0) no description available & (reliability: 1028.0) & (original description: Putative VPS36, Description = Vacuolar protein sorting-associated protein 36, PFAM = PF04157;PF11605)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf02620_55659-61039' '(at5g09320 : 203.0) VPS9B; CONTAINS InterPro DOMAIN/s: Vacuolar sorting protein 9, subgroup (InterPro:IPR013995), Vacuolar sorting protein 9 (InterPro:IPR003123); BEST Arabidopsis thaliana protein match is: Vacuolar sorting protein 9 (VPS9) domain (TAIR:AT3G19770.1); Has 1393 Blast hits to 1376 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 508; Fungi - 217; Plants - 509; Viruses - 0; Other Eukaryotes - 159 (source: NCBI BLink). & (reliability: 406.0) & (original description: Putative)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf02837_130604-139062' '(at3g52850 : 979.0) Encodes the Vacuolar Sorting Receptor-1 (VSR-1)/Epidermal Growth Factor Receptor-like protein1(VSR-1/ATELP1). Binds vacuolar targeting signals. Involved in sorting seed storage proteins into vacuoles.; vacuolar sorting receptor homolog 1 (VSR1); FUNCTIONS IN: amino-terminal vacuolar sorting propeptide binding; INVOLVED IN: Golgi to vacuole transport, vacuolar transport, protein targeting to vacuole; LOCATED IN: trans-Golgi network, Golgi apparatus, plasma membrane, integral to plasma membrane, Golgi transport complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF calcium-binding (InterPro:IPR013091), Growth factor, receptor (InterPro:IPR009030); BEST Arabidopsis thaliana protein match is: VACUOLAR SORTING RECEPTOR 2 (TAIR:AT2G30290.2); Has 12319 Blast hits to 5607 proteins in 222 species: Archae - 0; Bacteria - 78; Metazoa - 11101; Fungi - 9; Plants - 529; Viruses - 0; Other Eukaryotes - 602 (source: NCBI BLink). & (p93484|vsr1_pea : 876.0) Vacuolar sorting receptor 1 precursor (BP-80) (80 kDa proaleurein-binding protein) - Pisum sativum (Garden pea) & (gnl|cdd|80347 : 207.0) no description available & (reliability: 1958.0) & (original description: Putative VSR1, Description = Vacuolar-sorting receptor 1, PFAM = PF02225)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf03245_851222-863810' '(at3g19770 : 453.0) Guanine nucleotide exchange factor VPS9a. Can ctivate all Rab5 members to GTP-bound forms in vitro. Required for embryogenesis. Regulates the localization of ARA7 and ARA6. Involved in postembryonic root development.; VPS9A; FUNCTIONS IN: Rho guanyl-nucleotide exchange factor activity; INVOLVED IN: cell plate assembly, transport, cell wall biogenesis, post-embryonic root development, embryo development; LOCATED IN: cytosol, nucleus, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar sorting protein 9, subgroup (InterPro:IPR013995), Vacuolar sorting protein 9 (InterPro:IPR003123); BEST Arabidopsis thaliana protein match is: Vacuolar sorting protein 9 (VPS9) domain (TAIR:AT5G09320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37530 : 181.0) no description available & (gnl|cdd|85907 : 126.0) no description available & (reliability: 906.0) & (original description: Putative BnaA05g36780D, Description = BnaA05g36780D protein, PFAM = PF02204)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf04117_1010806-1019592' '(at2g05170 : 1464.0) Homologous to yeast VPS11. Forms a complex with VCL1 and AtVPS33. Involved in vacuolar biogenesis.; vacuolar protein sorting 11 (VPS11); FUNCTIONS IN: transporter activity, binding, zinc ion binding; INVOLVED IN: vacuole organization; LOCATED IN: plant-type vacuole membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 11 (InterPro:IPR016528), Zinc finger, RING-type (InterPro:IPR001841), Armadillo-type fold (InterPro:IPR016024); Has 716 Blast hits to 615 proteins in 203 species: Archae - 0; Bacteria - 2; Metazoa - 251; Fungi - 269; Plants - 42; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (gnl|cdd|37325 : 930.0) no description available & (reliability: 2928.0) & (original description: Putative VPS11, Description = Vacuolar protein-sorting-associated protein 11 homolog, PFAM = PF00637;PF17122;PF12451)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf04539_322580-330765' '(p49043|vpe_citsi : 739.0) Vacuolar-processing enzyme precursor (EC 3.4.22.-) (VPE) - Citrus sinensis (Sweet orange) & (gnl|cdd|36562 : 714.0) no description available & (at4g32940 : 712.0) Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions. They are essential in processing seed storage proteins and for mediating the susceptible response of toxin-induced cell death.; gamma vacuolar processing enzyme (GAMMA-VPE); CONTAINS InterPro DOMAIN/s: Peptidase C13, legumain (InterPro:IPR001096); BEST Arabidopsis thaliana protein match is: alpha-vacuolar processing enzyme (TAIR:AT2G25940.1); Has 789 Blast hits to 787 proteins in 239 species: Archae - 4; Bacteria - 12; Metazoa - 277; Fungi - 115; Plants - 257; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|85592 : 413.0) no description available & (reliability: 1424.0) & (original description: Putative bVPE, Description = Vacuolar-processing enzyme beta-isozyme, PFAM = PF01650)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf04539_553153-559261' '(p49043|vpe_citsi : 710.0) Vacuolar-processing enzyme precursor (EC 3.4.22.-) (VPE) - Citrus sinensis (Sweet orange) & (at2g25940 : 693.0) Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions.; alpha-vacuolar processing enzyme (ALPHA-VPE); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis, vacuolar protein processing; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase C13, legumain (InterPro:IPR001096); BEST Arabidopsis thaliana protein match is: gamma vacuolar processing enzyme (TAIR:AT4G32940.1); Has 793 Blast hits to 791 proteins in 239 species: Archae - 4; Bacteria - 12; Metazoa - 278; Fungi - 115; Plants - 259; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|36562 : 682.0) no description available & (gnl|cdd|85592 : 415.0) no description available & (reliability: 1386.0) & (original description: Putative bVPE, Description = Vacuolar-processing enzyme, PFAM = PF01650)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf04675_289413-922339' '(gnl|cdd|36562 : 573.0) no description available & (p49043|vpe_citsi : 544.0) Vacuolar-processing enzyme precursor (EC 3.4.22.-) (VPE) - Citrus sinensis (Sweet orange) & (at4g32940 : 526.0) Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions. They are essential in processing seed storage proteins and for mediating the susceptible response of toxin-induced cell death.; gamma vacuolar processing enzyme (GAMMA-VPE); CONTAINS InterPro DOMAIN/s: Peptidase C13, legumain (InterPro:IPR001096); BEST Arabidopsis thaliana protein match is: alpha-vacuolar processing enzyme (TAIR:AT2G25940.1); Has 789 Blast hits to 787 proteins in 239 species: Archae - 4; Bacteria - 12; Metazoa - 277; Fungi - 115; Plants - 257; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|85592 : 391.0) no description available & (reliability: 1052.0) & (original description: Putative pb3, Description = Putative legumain, PFAM = PF01650)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf04675_788638-799940' '(p49043|vpe_citsi : 765.0) Vacuolar-processing enzyme precursor (EC 3.4.22.-) (VPE) - Citrus sinensis (Sweet orange) & (at4g32940 : 742.0) Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions. They are essential in processing seed storage proteins and for mediating the susceptible response of toxin-induced cell death.; gamma vacuolar processing enzyme (GAMMA-VPE); CONTAINS InterPro DOMAIN/s: Peptidase C13, legumain (InterPro:IPR001096); BEST Arabidopsis thaliana protein match is: alpha-vacuolar processing enzyme (TAIR:AT2G25940.1); Has 789 Blast hits to 787 proteins in 239 species: Archae - 4; Bacteria - 12; Metazoa - 277; Fungi - 115; Plants - 257; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36562 : 724.0) no description available & (gnl|cdd|85592 : 420.0) no description available & (reliability: 1484.0) & (original description: Putative bVPE, Description = Vacuolar-processing enzyme, PFAM = PF01650)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf04675_799640-811556' '(gnl|cdd|36562 : 539.0) no description available & (p49043|vpe_citsi : 523.0) Vacuolar-processing enzyme precursor (EC 3.4.22.-) (VPE) - Citrus sinensis (Sweet orange) & (at4g32940 : 507.0) Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions. They are essential in processing seed storage proteins and for mediating the susceptible response of toxin-induced cell death.; gamma vacuolar processing enzyme (GAMMA-VPE); CONTAINS InterPro DOMAIN/s: Peptidase C13, legumain (InterPro:IPR001096); BEST Arabidopsis thaliana protein match is: alpha-vacuolar processing enzyme (TAIR:AT2G25940.1); Has 789 Blast hits to 787 proteins in 239 species: Archae - 4; Bacteria - 12; Metazoa - 277; Fungi - 115; Plants - 257; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|85592 : 368.0) no description available & (reliability: 1014.0) & (original description: Putative pb3, Description = Putative legumain, PFAM = PF01650)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf04675_901334-907971' '(gnl|cdd|36562 : 546.0) no description available & (p49043|vpe_citsi : 528.0) Vacuolar-processing enzyme precursor (EC 3.4.22.-) (VPE) - Citrus sinensis (Sweet orange) & (at4g32940 : 508.0) Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions. They are essential in processing seed storage proteins and for mediating the susceptible response of toxin-induced cell death.; gamma vacuolar processing enzyme (GAMMA-VPE); CONTAINS InterPro DOMAIN/s: Peptidase C13, legumain (InterPro:IPR001096); BEST Arabidopsis thaliana protein match is: alpha-vacuolar processing enzyme (TAIR:AT2G25940.1); Has 789 Blast hits to 787 proteins in 239 species: Archae - 4; Bacteria - 12; Metazoa - 277; Fungi - 115; Plants - 257; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|85592 : 368.0) no description available & (reliability: 1016.0) & (original description: Putative bVPE, Description = Vacuolar-processing enzyme, PFAM = PF01650)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf05554_762860-773387' '(at1g09070 : 82.4) SRC2 specifically binds the peptide PIEPPPHH, and moves from ER to a vacuole fraction where it gets internalized. Involved in Protein Storage Vacuole targeting.; soybean gene regulated by cold-2 (SRC2); CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G16510.1); Has 25146 Blast hits to 15856 proteins in 1076 species: Archae - 6; Bacteria - 3010; Metazoa - 13770; Fungi - 3151; Plants - 2962; Viruses - 83; Other Eukaryotes - 2164 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative , Description = C2 calcium-dependent membrane targeting, PFAM = PF00168)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf06356_40977-49249' '(at3g46870 : 106.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G62350.1); Has 7906 Blast hits to 3591 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 82; Plants - 7752; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative , Description = , PFAM = PF01535;PF13041)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf06603_286731-295197' '(at2g30290 : 959.0) VACUOLAR SORTING RECEPTOR 2 (VSR2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: protein targeting to vacuole; LOCATED IN: integral to plasma membrane, Golgi transport complex; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF calcium-binding (InterPro:IPR013091), EGF-like calcium-binding (InterPro:IPR001881), Growth factor, receptor (InterPro:IPR009030); BEST Arabidopsis thaliana protein match is: vacuolar sorting receptor homolog 1 (TAIR:AT3G52850.1). & (p93484|vsr1_pea : 895.0) Vacuolar sorting receptor 1 precursor (BP-80) (80 kDa proaleurein-binding protein) - Pisum sativum (Garden pea) & (gnl|cdd|80347 : 215.0) no description available & (reliability: 1918.0) & (original description: Putative VSR2, Description = Vacuolar-sorting receptor 2, PFAM = PF02225)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf07250_37948-48422' '(at1g75850 : 1137.0) VPS35 homolog B (VPS35B); CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 35 (InterPro:IPR005378); BEST Arabidopsis thaliana protein match is: VPS35 homolog A (TAIR:AT2G17790.1); Has 618 Blast hits to 508 proteins in 209 species: Archae - 0; Bacteria - 1; Metazoa - 191; Fungi - 219; Plants - 72; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|36323 : 1023.0) no description available & (gnl|cdd|86391 : 949.0) no description available & (reliability: 2274.0) & (original description: Putative VPS35B, Description = Vacuolar protein sorting-associated protein 35B, PFAM = PF03635)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf07638_403149-405685' '(at4g19003 : 315.0) VPS25; CONTAINS InterPro DOMAIN/s: ESCRT-II complex, vps25 subunit, N-terminal winged helix (InterPro:IPR014041), ESCRT-II complex, vps25 subunit, C-terminal winged helix (InterPro:IPR014040), ESCRT-II complex, vps25 subunit (InterPro:IPR008570); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86968 : 222.0) no description available & (gnl|cdd|39271 : 143.0) no description available & (reliability: 630.0) & (original description: Putative VPS25, Description = Vacuolar protein sorting-associated protein 25, PFAM = PF05871)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf07755_6127-13629' '(at1g30900 : 907.0) VACUOLAR SORTING RECEPTOR 6 (VSR6); FUNCTIONS IN: calcium ion binding; INVOLVED IN: protein targeting to vacuole; LOCATED IN: integral to plasma membrane, Golgi transport complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-like calcium-binding (InterPro:IPR001881), Growth factor, receptor (InterPro:IPR009030); BEST Arabidopsis thaliana protein match is: VACUOLAR SORTING RECEPTOR 5 (TAIR:AT2G34940.1); Has 12335 Blast hits to 5905 proteins in 215 species: Archae - 2; Bacteria - 51; Metazoa - 11201; Fungi - 6; Plants - 368; Viruses - 0; Other Eukaryotes - 707 (source: NCBI BLink). & (p93484|vsr1_pea : 813.0) Vacuolar sorting receptor 1 precursor (BP-80) (80 kDa proaleurein-binding protein) - Pisum sativum (Garden pea) & (gnl|cdd|80347 : 193.0) no description available & (reliability: 1814.0) & (original description: Putative VSR6, Description = Vacuolar-sorting receptor 6, PFAM = PF02225)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf07790_165631-171841' '(at4g05000 : 318.0) vacuolar protein sorting-associated protein 28 homolog 1 (VPS28-1); CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated, VPS28, N-terminal (InterPro:IPR017898), Vacuolar protein sorting-associated, VPS28, C-terminal (InterPro:IPR017899), Vacuolar protein sorting-associated, VPS28 (InterPro:IPR007143); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting-associated protein 28 homolog 1 (TAIR:AT4G21560.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38494 : 291.0) no description available & (gnl|cdd|67606 : 244.0) no description available & (reliability: 616.0) & (original description: Putative vps28, Description = Vacuolar protein sorting-associated protein 28, PFAM = PF03997)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf08001_253347-261345' '(at2g14740 : 1015.0) Encodes a vacuolar sorting receptor that participates in vacuolar sorting in vegetative tissues and in seeds.; vaculolar sorting receptor 3 (VSR3); FUNCTIONS IN: calcium ion binding; INVOLVED IN: intracellular protein transport, protein targeting to vacuole; LOCATED IN: integral to plasma membrane, Golgi transport complex, membrane; EXPRESSED IN: callus, leaf; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-like (InterPro:IPR006210), Growth factor, receptor (InterPro:IPR009030), EGF-like region, conserved site (InterPro:IPR013032); BEST Arabidopsis thaliana protein match is: vacuolar sorting receptor 4 (TAIR:AT2G14720.2); Has 14459 Blast hits to 6347 proteins in 253 species: Archae - 2; Bacteria - 131; Metazoa - 13188; Fungi - 10; Plants - 479; Viruses - 0; Other Eukaryotes - 649 (source: NCBI BLink). & (p93484|vsr1_pea : 998.0) Vacuolar sorting receptor 1 precursor (BP-80) (80 kDa proaleurein-binding protein) - Pisum sativum (Garden pea) & (gnl|cdd|80347 : 200.0) no description available & (reliability: 2030.0) & (original description: Putative VSR3, Description = Vacuolar-sorting receptor 3, PFAM = PF12662;PF02225)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf08675_144933-150540' '(at1g48550 : 412.0) Vacuolar protein sorting-associated protein 26; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport, vacuolar transport, retrograde transport, endosome to Golgi; LOCATED IN: retromer complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 26 (InterPro:IPR005377). & (gnl|cdd|37928 : 343.0) no description available & (gnl|cdd|67271 : 111.0) no description available & (reliability: 824.0) & (original description: Putative dscr3, Description = Vacuolar protein sorting-associated protein 26, PFAM = PF03643)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf08702_3537-16844' '(at3g54860 : 869.0) Homologous to yeast VPS33. Forms a complex with VCL1 and AtVPS11. Involved in vacuolar biogenesis.; ATVPS33; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting 45 (TAIR:AT1G77140.1); Has 1433 Blast hits to 1411 proteins in 217 species: Archae - 0; Bacteria - 0; Metazoa - 612; Fungi - 387; Plants - 135; Viruses - 0; Other Eukaryotes - 299 (source: NCBI BLink). & (gnl|cdd|36516 : 515.0) no description available & (gnl|cdd|85171 : 212.0) no description available & (reliability: 1738.0) & (original description: Putative VPS33, Description = Vacuolar protein-sorting-associated protein 33 homolog, PFAM = PF00995)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf09089_159976-165123' '(at5g06140 : 215.0) Homolog of yeast retromer subunit VPS5. Part of a retromer-like protein complex involved in endosome to lysosome protein transport. In roots it co-localizes with the PIN2 auxin efflux carrier. Involved in endocytic sorting of membrane proteins including PIN2, BOR1 and BRI1.; sorting nexin 1 (SNX1); FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: in 7 processes; LOCATED IN: endosome, microsome, retromer complex, membrane, multivesicular body; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2B (TAIR:AT5G07120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37484 : 125.0) no description available & (gnl|cdd|85027 : 91.2) no description available & (reliability: 430.0) & (original description: Putative SNX1, Description = Sorting nexin 1, PFAM = PF00787)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf09089_160083-174653' '(at5g06140 : 553.0) Homolog of yeast retromer subunit VPS5. Part of a retromer-like protein complex involved in endosome to lysosome protein transport. In roots it co-localizes with the PIN2 auxin efflux carrier. Involved in endocytic sorting of membrane proteins including PIN2, BOR1 and BRI1.; sorting nexin 1 (SNX1); FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: in 7 processes; LOCATED IN: endosome, microsome, retromer complex, membrane, multivesicular body; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2B (TAIR:AT5G07120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37484 : 216.0) no description available & (gnl|cdd|72740 : 102.0) no description available & (reliability: 1106.0) & (original description: Putative SNX1, Description = Sorting nexin 1, PFAM = PF09325;PF00787)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf10448_53906-56894' '(at1g32410 : 172.0) Vacuolar protein sorting 55 (VPS55) family protein; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting 55 (InterPro:IPR007262); BEST Arabidopsis thaliana protein match is: Vacuolar protein sorting 55 (VPS55) family protein (TAIR:AT3G11530.2); Has 430 Blast hits to 430 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 181; Fungi - 137; Plants - 85; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|37385 : 123.0) no description available & (gnl|cdd|86556 : 112.0) no description available & (reliability: 344.0) & (original description: Putative At1g32410, Description = Vacuolar protein sorting-associated protein 55 homolog, PFAM = PF04133)' T '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'niben101scf12443_65952-91925' '(at2g17790 : 1153.0) Encodes a protein with similarity to yeast VPS35 which encodes a component of the retromer involved in retrograde endosomal transport. Mutants partially suppress the loss of VTI11 function in Arabidopsis and restores gravitropism in the double mutant.; VPS35 homolog A (VPS35A); CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 35 (InterPro:IPR005378); BEST Arabidopsis thaliana protein match is: VPS35 homolog B (TAIR:AT1G75850.1); Has 618 Blast hits to 509 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 194; Fungi - 224; Plants - 73; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|36323 : 1047.0) no description available & (gnl|cdd|86391 : 963.0) no description available & (reliability: 2306.0) & (original description: Putative VPS35B, Description = Vacuolar protein sorting-associated protein 35B, PFAM = PF03635)' T '29.3.4.4' 'protein.targeting.secretory pathway.plasma membrane' 'nbv0.3scaffold58848_4958-9379' '(at4g11220 : 277.0) VIRB2-interacting protein 2 (BTI2); INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 1 (TAIR:AT4G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37003 : 234.0) no description available & (gnl|cdd|66169 : 213.0) no description available & (reliability: 508.0) & (original description: Putative RTNLB5, Description = Reticulon-like protein B5, PFAM = PF02453)' T '29.3.4.4' 'protein.targeting.secretory pathway.plasma membrane' 'niben101scf00339_314740-317702' '(at2g30050 : 474.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: membrane budding; LOCATED IN: nucleolus, heterotrimeric G-protein complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G01340.2); Has 24526 Blast hits to 15097 proteins in 577 species: Archae - 22; Bacteria - 4838; Metazoa - 8772; Fungi - 5346; Plants - 2605; Viruses - 0; Other Eukaryotes - 2943 (source: NCBI BLink). & (gnl|cdd|36546 : 408.0) no description available & (gnl|cdd|29257 : 112.0) no description available & (reliability: 948.0) & (original description: Putative SEC13B, Description = Protein transport protein SEC13 homolog B, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '29.3.4.4' 'protein.targeting.secretory pathway.plasma membrane' 'niben101scf01291_534445-537685' '(at2g46170 : 226.0) Reticulon family protein; INVOLVED IN: response to karrikin; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT3G61560.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37003 : 196.0) no description available & (gnl|cdd|66169 : 177.0) no description available & (reliability: 428.0) & (original description: Putative PGSC0003DMG400006308, Description = Reticulon-like protein, PFAM = PF02453)' T '29.3.4.4' 'protein.targeting.secretory pathway.plasma membrane' 'niben101scf01374_714897-717799' '(at2g30050 : 455.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: membrane budding; LOCATED IN: nucleolus, heterotrimeric G-protein complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G01340.2); Has 24526 Blast hits to 15097 proteins in 577 species: Archae - 22; Bacteria - 4838; Metazoa - 8772; Fungi - 5346; Plants - 2605; Viruses - 0; Other Eukaryotes - 2943 (source: NCBI BLink). & (gnl|cdd|36546 : 396.0) no description available & (gnl|cdd|29257 : 110.0) no description available & (reliability: 910.0) & (original description: Putative Sec13, Description = Protein SEC13 homolog, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '29.3.4.4' 'protein.targeting.secretory pathway.plasma membrane' 'niben101scf01375_252209-256009' '(at4g11220 : 265.0) VIRB2-interacting protein 2 (BTI2); INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 1 (TAIR:AT4G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37003 : 243.0) no description available & (gnl|cdd|66169 : 230.0) no description available & (reliability: 484.0) & (original description: Putative PGSC0003DMG400019959, Description = Reticulon-like protein, PFAM = PF02453)' T '29.3.4.4' 'protein.targeting.secretory pathway.plasma membrane' 'niben101scf01402_269730-272635' '(at2g30050 : 475.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: membrane budding; LOCATED IN: nucleolus, heterotrimeric G-protein complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G01340.2); Has 24526 Blast hits to 15097 proteins in 577 species: Archae - 22; Bacteria - 4838; Metazoa - 8772; Fungi - 5346; Plants - 2605; Viruses - 0; Other Eukaryotes - 2943 (source: NCBI BLink). & (gnl|cdd|36546 : 409.0) no description available & (gnl|cdd|29257 : 110.0) no description available & (reliability: 950.0) & (original description: Putative SEC13B, Description = Protein transport protein SEC13 homolog B, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '29.3.4.4' 'protein.targeting.secretory pathway.plasma membrane' 'niben101scf01756_326559-331424' '(at2g46170 : 278.0) Reticulon family protein; INVOLVED IN: response to karrikin; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT3G61560.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37003 : 261.0) no description available & (gnl|cdd|66169 : 248.0) no description available & (reliability: 522.0) & (original description: Putative RTNLB5, Description = Reticulon-like protein B5, PFAM = PF02453)' T '29.3.4.4' 'protein.targeting.secretory pathway.plasma membrane' 'niben101scf02201_82423-86707' '(at2g17980 : 950.0) member of SLY1 Gene Family; ATSLY1; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, vesicle-mediated transport, vesicle docking involved in exocytosis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: Sec1/munc18-like (SM) proteins superfamily (TAIR:AT4G31740.1); Has 1583 Blast hits to 1569 proteins in 233 species: Archae - 0; Bacteria - 15; Metazoa - 661; Fungi - 409; Plants - 204; Viruses - 0; Other Eukaryotes - 294 (source: NCBI BLink). & (gnl|cdd|36515 : 770.0) no description available & (q851w1|sly1_orysa : 693.0) SEC1-family transport protein SLY1 - Oryza sativa (Rice) & (gnl|cdd|85171 : 330.0) no description available & (reliability: 1900.0) & (original description: Putative scfd1, Description = SEC1 family transport protein SLY1, PFAM = PF00995)' T '29.3.4.4' 'protein.targeting.secretory pathway.plasma membrane' 'niben101scf04294_312332-382848' '(at2g17980 : 978.0) member of SLY1 Gene Family; ATSLY1; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, vesicle-mediated transport, vesicle docking involved in exocytosis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: Sec1/munc18-like (SM) proteins superfamily (TAIR:AT4G31740.1); Has 1583 Blast hits to 1569 proteins in 233 species: Archae - 0; Bacteria - 15; Metazoa - 661; Fungi - 409; Plants - 204; Viruses - 0; Other Eukaryotes - 294 (source: NCBI BLink). & (gnl|cdd|36515 : 780.0) no description available & (q851w1|sly1_orysa : 712.0) SEC1-family transport protein SLY1 - Oryza sativa (Rice) & (gnl|cdd|85171 : 327.0) no description available & (reliability: 1956.0) & (original description: Putative SLY1, Description = SEC1 family transport protein SLY1, PFAM = PF00995)' T '29.3.4.4' 'protein.targeting.secretory pathway.plasma membrane' 'niben101scf06280_200601-203250' '(at2g30050 : 475.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: membrane budding; LOCATED IN: nucleolus, heterotrimeric G-protein complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G01340.2); Has 24526 Blast hits to 15097 proteins in 577 species: Archae - 22; Bacteria - 4838; Metazoa - 8772; Fungi - 5346; Plants - 2605; Viruses - 0; Other Eukaryotes - 2943 (source: NCBI BLink). & (gnl|cdd|36546 : 410.0) no description available & (gnl|cdd|29257 : 111.0) no description available & (reliability: 950.0) & (original description: Putative SEC13B, Description = Protein transport protein SEC13 homolog B, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '29.3.4.4' 'protein.targeting.secretory pathway.plasma membrane' 'niben101scf17834_1-3294' '(at4g23630 : 222.0) VIRB2-interacting protein 1 (BTI1); INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 2 (TAIR:AT4G11220.1); Has 1242 Blast hits to 1240 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 705; Fungi - 11; Plants - 505; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|37003 : 195.0) no description available & (gnl|cdd|66169 : 178.0) no description available & (reliability: 426.0) & (original description: Putative RTNLB5, Description = Reticulon-like protein B5, PFAM = PF02453)' T '29.3.4.4' 'protein.targeting.secretory pathway.plasma membrane' 'niben101scf23152_39515-43936' '(at4g11220 : 277.0) VIRB2-interacting protein 2 (BTI2); INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 1 (TAIR:AT4G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37003 : 234.0) no description available & (gnl|cdd|66169 : 212.0) no description available & (reliability: 508.0) & (original description: Putative PGSC0003DMG402028903, Description = Reticulon-like protein, PFAM = PF02453)' T '29.3.4.4' 'protein.targeting.secretory pathway.plasma membrane' 'niben101scf28925_22656-26422' '(at4g11220 : 272.0) VIRB2-interacting protein 2 (BTI2); INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 1 (TAIR:AT4G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37003 : 253.0) no description available & (gnl|cdd|66169 : 237.0) no description available & (reliability: 498.0) & (original description: Putative RTNLB5, Description = Reticulon-like protein B5, PFAM = PF02453)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'nbv0.3scaffold532_150218-156715' '(at5g46630 : 393.0) clathrin adaptor complexes medium subunit family protein, contains Pfam profile: PF00928 adaptor complexes medium subunit family; similar to micro-adaptins of clathrin coated vesicle adaptor complexes; Clathrin adaptor complexes medium subunit family protein; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: clathrin vesicle coat, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Clathrin adaptor, mu subunit (InterPro:IPR001392), Clathrin coat associated protein AP-50 (InterPro:IPR015629), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G60780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36156 : 322.0) no description available & (gnl|cdd|85129 : 159.0) no description available & (reliability: 786.0) & (original description: Putative ap50, Description = AP-2 complex subunit mu, PFAM = PF00928)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'nbv0.3scaffold1998_2020-10394' '(at5g52280 : 348.0) Myosin heavy chain-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Myosin heavy chain-related protein (TAIR:AT1G63300.1); Has 217843 Blast hits to 105430 proteins in 3541 species: Archae - 2871; Bacteria - 41932; Metazoa - 88690; Fungi - 17315; Plants - 10871; Viruses - 1027; Other Eukaryotes - 55137 (source: NCBI BLink). & (reliability: 696.0) & (original description: Putative PGSC0003DMG400014292, Description = Putative ovule protein, PFAM = PF10358)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'nbv0.3scaffold5147_48096-57816' '(at1g67680 : 666.0) SRP72 RNA-binding domain; FUNCTIONS IN: 7S RNA binding; INVOLVED IN: SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: signal recognition particle; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Signal recognition particle, SRP72 subunit, RNA-binding (InterPro:IPR013699); BEST Arabidopsis thaliana protein match is: SRP72 RNA-binding domain (TAIR:AT1G67650.1); Has 655 Blast hits to 637 proteins in 232 species: Archae - 21; Bacteria - 65; Metazoa - 237; Fungi - 154; Plants - 42; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (gnl|cdd|37587 : 538.0) no description available & (reliability: 1332.0) & (original description: Putative BnaA07g26580D, Description = Signal recognition particle subunit SRP72, PFAM = PF17004;PF08492;PF13432)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'nbv0.3scaffold6359_30861-38643' '(at1g14820 : 228.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G01630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36683 : 82.7) no description available & (reliability: 456.0) & (original description: Putative BnaC08g39280D, Description = F10B6.22, PFAM = PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'nbv0.3scaffold6821_53427-56867' '(at1g75170 : 117.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G36640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative At4g36640, Description = At4g36640, PFAM = PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'nbv0.3scaffold12649_7461-16014' '(at2g21520 : 859.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36684 : 275.0) no description available & (gnl|cdd|84928 : 139.0) no description available & (reliability: 1656.0) & (original description: Putative SFH8, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH8, PFAM = PF00650;PF03765)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'nbv0.3scaffold18206_1181-11019' '(at1g60780 : 802.0) HAPLESS 13 (HAP13); INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: clathrin vesicle coat, clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Clathrin adaptor, mu subunit (InterPro:IPR001392), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G10730.1); Has 2206 Blast hits to 2139 proteins in 330 species: Archae - 0; Bacteria - 0; Metazoa - 1107; Fungi - 506; Plants - 213; Viruses - 0; Other Eukaryotes - 380 (source: NCBI BLink). & (gnl|cdd|36155 : 597.0) no description available & (gnl|cdd|85129 : 197.0) no description available & (reliability: 1604.0) & (original description: Putative AP1M2, Description = AP-1 complex subunit mu-2, PFAM = PF01217;PF00928)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'nbv0.3scaffold18588_2380-13879' '(at4g20410 : 351.0) Encodes a member of the gamma-soluble NSF attachment protein (gSNAP) gene family.; gamma-soluble NSF attachment protein (GSNAP); FUNCTIONS IN: transporter activity, binding; INVOLVED IN: intracellular protein transport; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NSF attachment protein (InterPro:IPR000744), Tetratricopeptide-like helical (InterPro:IPR011990); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36798 : 269.0) no description available & (reliability: 702.0) & (original description: Putative GSNAP, Description = Gamma-soluble NSF attachment protein, PFAM = PF14938)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'nbv0.3scaffold19013_28111-38586' '(at1g48900 : 814.0) Signal recognition particle, SRP54 subunit protein; FUNCTIONS IN: 7S RNA binding, mRNA binding, nucleoside-triphosphatase activity, GTP binding, nucleotide binding; INVOLVED IN: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition, SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: signal recognition particle, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Signal recognition particle, SRP54 subunit, helical bundle (InterPro:IPR013822), Signal recognition particle, SRP54 subunit, M-domain (InterPro:IPR004125), Signal recognition particle, SRP54 subunit (InterPro:IPR006325), Signal recognition particle, SRP54 subunit, GTPase (InterPro:IPR000897); BEST Arabidopsis thaliana protein match is: signal recognition particle 54 kDa subunit (TAIR:AT1G15310.1); Has 17287 Blast hits to 17282 proteins in 2918 species: Archae - 472; Bacteria - 10591; Metazoa - 363; Fungi - 288; Plants - 279; Viruses - 1; Other Eukaryotes - 5293 (source: NCBI BLink). & (p49969|sr542_horvu : 766.0) Signal recognition particle 54 kDa protein 2 (SRP54) - Hordeum vulgare (Barley) & (gnl|cdd|35999 : 672.0) no description available & (gnl|cdd|30887 : 451.0) no description available & (reliability: 1628.0) & (original description: Putative srp54, Description = Signal recognition particle 54 kDa protein, PFAM = PF02978;PF02881;PF00448)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'nbv0.3scaffold24231_18767-27086' '(at4g24550 : 776.0) Clathrin adaptor complexes medium subunit family protein; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: clathrin vesicle coat, clathrin adaptor complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Clathrin adaptor, mu subunit (InterPro:IPR001392), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G10730.1). & (gnl|cdd|36155 : 425.0) no description available & (gnl|cdd|85129 : 124.0) no description available & (reliability: 1552.0) & (original description: Putative AP4M, Description = AP-4 complex subunit mu, PFAM = PF00928)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'nbv0.3scaffold24702_8876-13706' '(at4g09160 : 401.0) SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), GOLD (InterPro:IPR009038), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G72160.1); Has 12185 Blast hits to 8606 proteins in 820 species: Archae - 53; Bacteria - 1604; Metazoa - 4851; Fungi - 2300; Plants - 1007; Viruses - 130; Other Eukaryotes - 2240 (source: NCBI BLink). & (gnl|cdd|36684 : 176.0) no description available & (gnl|cdd|29115 : 114.0) no description available & (reliability: 802.0) & (original description: Putative PATL1, Description = Patellin-1, PFAM = PF03765;PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'nbv0.3scaffold25061_20595-27969' '(at1g55690 : 439.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT5G56160.1); Has 2142 Blast hits to 2127 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 576; Fungi - 461; Plants - 793; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|36684 : 187.0) no description available & (gnl|cdd|47819 : 99.7) no description available & (reliability: 878.0) & (original description: Putative COW1, Description = Sec14 cytosolic factor, PFAM = PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'nbv0.3scaffold52302_7574-13432' '(at3g49100 : 166.0) Signal recognition particle, SRP9/SRP14 subunit; FUNCTIONS IN: 7S RNA binding, signal recognition particle binding; INVOLVED IN: negative regulation of translational elongation, SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: signal recognition particle; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal recognition particle, SRP9/SRP14 subunit (InterPro:IPR009018), Signal recognition particle, SRP9 subunit (InterPro:IPR008832); Has 222 Blast hits to 222 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 140; Fungi - 16; Plants - 42; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (o04438|srp09_maize : 156.0) Signal recognition particle 9 kDa protein (SRP9) - Zea mays (Maize) & (gnl|cdd|38675 : 119.0) no description available & (gnl|cdd|86874 : 110.0) no description available & (reliability: 332.0) & (original description: Putative SRP9, Description = Signal recognition particle 9 kDa protein, PFAM = PF05486)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'nbv0.3scaffold57919_1-4299' '(at1g01630 : 350.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G14820.3); Has 3015 Blast hits to 3010 proteins in 234 species: Archae - 0; Bacteria - 0; Metazoa - 1124; Fungi - 666; Plants - 866; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink). & (gnl|cdd|36683 : 221.0) no description available & (gnl|cdd|47819 : 117.0) no description available & (reliability: 700.0) & (original description: Putative TCM_008322, Description = Sec14p-like phosphatidylinositol transfer family protein isoform 1, PFAM = PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'nbv0.3scaffold74552_3780-8269' '(at1g01630 : 120.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G14820.3); Has 3015 Blast hits to 3010 proteins in 234 species: Archae - 0; Bacteria - 0; Metazoa - 1124; Fungi - 666; Plants - 866; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink). & (gnl|cdd|36683 : 90.4) no description available & (reliability: 240.0) & (original description: Putative PGSC0003DMG400014173, Description = Polyphosphoinositide-binding protein, PFAM = )' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'nbv0.3scaffold102572_1-2928' '(at5g46630 : 134.0) clathrin adaptor complexes medium subunit family protein, contains Pfam profile: PF00928 adaptor complexes medium subunit family; similar to micro-adaptins of clathrin coated vesicle adaptor complexes; Clathrin adaptor complexes medium subunit family protein; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: clathrin vesicle coat, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Clathrin adaptor, mu subunit (InterPro:IPR001392), Clathrin coat associated protein AP-50 (InterPro:IPR015629), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G60780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36156 : 125.0) no description available & (reliability: 268.0) & (original description: Putative BnaA07g12500D, Description = BnaA07g12500D protein, PFAM = )' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'nbv0.5scaffold325_302426-308131' '(at2g21540 : 608.0) SEC14-like 3 (SFH3); FUNCTIONS IN: phosphatidylinositol transporter activity; INVOLVED IN: flower development, transport; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39180.1). & (gnl|cdd|36684 : 269.0) no description available & (gnl|cdd|84928 : 142.0) no description available & (reliability: 1216.0) & (original description: Putative SFH12, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH12, PFAM = PF03765;PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'nbv0.5scaffold941_503913-516302' '(at3g24840 : 588.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: intracellular; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39170.1); Has 2612 Blast hits to 2599 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 823; Fungi - 527; Plants - 863; Viruses - 0; Other Eukaryotes - 399 (source: NCBI BLink). & (gnl|cdd|36684 : 243.0) no description available & (gnl|cdd|29115 : 123.0) no description available & (reliability: 1176.0) & (original description: Putative SFH9, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH9, PFAM = PF00650;PF03765)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'nbv0.5scaffold1467_283028-287962' '(at1g60970 : 243.0) SNARE-like superfamily protein; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: clathrin vesicle coat; EXPRESSED IN: leaf whorl, sperm cell, pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT3G09800.1); Has 621 Blast hits to 621 proteins in 219 species: Archae - 0; Bacteria - 0; Metazoa - 227; Fungi - 139; Plants - 149; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|38553 : 207.0) no description available & (gnl|cdd|35100 : 95.1) no description available & (reliability: 486.0) & (original description: Putative copz1, Description = Coatomer subunit zeta-1, PFAM = PF01217)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'nbv0.5scaffold3260_43528-54605' '(at3g46450 : 486.0) SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); BEST Arabidopsis thaliana protein match is: SEC14-like 3 (TAIR:AT2G21540.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47819 : 90.8) no description available & (reliability: 972.0) & (original description: Putative BnaC03g53690D, Description = BnaC03g53690D protein, PFAM = PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'nbv0.5scaffold4189_169455-174171' '(at5g67560 : 186.0) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.; ADP-ribosylation factor-like A1D (ARLA1D); FUNCTIONS IN: GTP binding; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor-like A1C (TAIR:AT3G49870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35298 : 161.0) no description available & (gnl|cdd|58042 : 148.0) no description available & (reliability: 372.0) & (original description: Putative arf5, Description = ADP-ribosylation factor-like protein 8B, PFAM = PF00025)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'nbv0.5scaffold4293_9621-59837' '(at1g01630 : 193.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G14820.3); Has 3015 Blast hits to 3010 proteins in 234 species: Archae - 0; Bacteria - 0; Metazoa - 1124; Fungi - 666; Plants - 866; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink). & (gnl|cdd|36683 : 148.0) no description available & (reliability: 386.0) & (original description: Putative PGSC0003DMG400014173, Description = Polyphosphoinositide-binding protein, PFAM = PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'nbv0.5scaffold4358_31542-44313' '(at5g52280 : 303.0) Myosin heavy chain-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Myosin heavy chain-related protein (TAIR:AT1G63300.1); Has 217843 Blast hits to 105430 proteins in 3541 species: Archae - 2871; Bacteria - 41932; Metazoa - 88690; Fungi - 17315; Plants - 10871; Viruses - 1027; Other Eukaryotes - 55137 (source: NCBI BLink). & (reliability: 606.0) & (original description: Putative PGSC0003DMG400014292, Description = Putative ovule protein, PFAM = PF10358)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'nbv0.5scaffold4394_18505-32914' '(at5g17060 : 374.0) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor 1; ARF 1 (GP:385340) {Drosophila melanogaster), other ARFs and ARF-like proteins.; ADP-ribosylation factor B1B (ARFB1B); FUNCTIONS IN: GTP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor B1C (TAIR:AT3G03120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58033 : 292.0) no description available & (gnl|cdd|35293 : 276.0) no description available & (p51824|arf1_soltu : 240.0) ADP-ribosylation factor 1 - Solanum tuberosum (Potato) & (reliability: 748.0) & (original description: Putative arf1, Description = ADP-ribosylation factor 1, PFAM = PF00025)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'nbv0.5scaffold5591_54650-59454' '(at4g09160 : 312.0) SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), GOLD (InterPro:IPR009038), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G72160.1); Has 12185 Blast hits to 8606 proteins in 820 species: Archae - 53; Bacteria - 1604; Metazoa - 4851; Fungi - 2300; Plants - 1007; Viruses - 130; Other Eukaryotes - 2240 (source: NCBI BLink). & (gnl|cdd|36684 : 137.0) no description available & (gnl|cdd|29115 : 118.0) no description available & (reliability: 624.0) & (original description: Putative BnaA03g23950D, Description = BnaA03g23950D protein, PFAM = PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'nbv0.5scaffold5868_75121-82216' '(at3g07680 : 268.0) emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT3G22845.1); Has 859 Blast hits to 859 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 431; Fungi - 210; Plants - 147; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|36905 : 186.0) no description available & (reliability: 536.0) & (original description: Putative Sb07g026110, Description = Putative uncharacterized protein Sb07g026110, PFAM = PF01105)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'nbv0.5scaffold6030_113589-119914' '(at5g47730 : 428.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G55840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36684 : 159.0) no description available & (gnl|cdd|47819 : 103.0) no description available & (reliability: 856.0) & (original description: Putative Sb10g023760, Description = Putative uncharacterized protein Sb10g023760, PFAM = PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00000109ctg011_2390-8775' '(at5g52280 : 309.0) Myosin heavy chain-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Myosin heavy chain-related protein (TAIR:AT1G63300.1); Has 217843 Blast hits to 105430 proteins in 3541 species: Archae - 2871; Bacteria - 41932; Metazoa - 88690; Fungi - 17315; Plants - 10871; Viruses - 1027; Other Eukaryotes - 55137 (source: NCBI BLink). & (reliability: 618.0) & (original description: Putative PGSC0003DMG400014292, Description = Putative ovule protein, PFAM = PF10358)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00001465ctg013_1-4365' '(gnl|cdd|71337 : 107.0) no description available & (at5g27220 : 94.0) Frigida-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT5G48385.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative PGSC0003DMG400022488, Description = Putative myosin-10-like, PFAM = PF07899)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00001920ctg014_19330-28932' '(at1g11890 : 407.0) member of SEC22 Gene Family; SECRETION 22 (SEC22); FUNCTIONS IN: transporter activity; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT5G52270.1); Has 1577 Blast hits to 1577 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 548; Fungi - 342; Plants - 449; Viruses - 0; Other Eukaryotes - 238 (source: NCBI BLink). & (gnl|cdd|36080 : 262.0) no description available & (gnl|cdd|34744 : 103.0) no description available & (reliability: 814.0) & (original description: Putative SEC22, Description = 25.3 kDa vesicle transport protein, PFAM = PF00957;PF13774)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00003231ctg000_661-5514' '(at5g05670 : 354.0) signal recognition particle binding; FUNCTIONS IN: signal recognition particle binding; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Signal recognition particle receptor, beta subunit (InterPro:IPR019009); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G18770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35313 : 245.0) no description available & (gnl|cdd|57988 : 182.0) no description available & (reliability: 708.0) & (original description: Putative SRP102, Description = Signal recognition particle receptor subunit beta, PFAM = PF09439)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00003462ctg002_1651-5983' '(at5g27430 : 255.0) Signal peptidase subunit; FUNCTIONS IN: peptidase activity; INVOLVED IN: signal peptide processing; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Signal peptidase 22kDa subunit (InterPro:IPR007653); BEST Arabidopsis thaliana protein match is: Signal peptidase subunit (TAIR:AT3G05230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38582 : 193.0) no description available & (gnl|cdd|68156 : 172.0) no description available & (q9lgb4|spcs3_orysa : 116.0) Probable signal peptidase complex subunit 3 (EC 3.4.-.-) (Microsomal signal peptidase 22 kDa subunit) (SPase 22 kDa subunit) (SPC22) - Oryza sativa (Rice) & (reliability: 510.0) & (original description: Putative At5g27430, Description = Signal peptidase complex subunit 3B, PFAM = PF04573)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00004726ctg006_18032-23354' '(at2g21540 : 556.0) SEC14-like 3 (SFH3); FUNCTIONS IN: phosphatidylinositol transporter activity; INVOLVED IN: flower development, transport; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39180.1). & (gnl|cdd|36684 : 264.0) no description available & (gnl|cdd|84928 : 139.0) no description available & (reliability: 1112.0) & (original description: Putative SFH12, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH12, PFAM = PF00650;PF03765)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00007893ctg006_1-3822' '(at4g36490 : 332.0) SEC14-like 12 (SFH12); CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT2G18180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36684 : 203.0) no description available & (gnl|cdd|84928 : 139.0) no description available & (reliability: 664.0) & (original description: Putative BnaC04g33440D, Description = BnaC04g33440D protein, PFAM = PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00009459ctg007_3908-8391' '(at1g01630 : 174.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G14820.3); Has 3015 Blast hits to 3010 proteins in 234 species: Archae - 0; Bacteria - 0; Metazoa - 1124; Fungi - 666; Plants - 866; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink). & (gnl|cdd|36683 : 130.0) no description available & (reliability: 348.0) & (original description: Putative PGSC0003DMG400014173, Description = Putative ovule protein, PFAM = PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00009707ctg005_15756-18598' '(gnl|cdd|58033 : 103.0) no description available & (gnl|cdd|35293 : 98.0) no description available & (at1g70490 : 96.3) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.; ARFA1D; FUNCTIONS IN: phospholipase activator activity, GTP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor 1 (TAIR:AT1G23490.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p51822|arf1_dauca : 95.9) ADP-ribosylation factor 1 - Daucus carota (Carrot) & (reliability: 192.6) & (original description: Putative arf1, Description = ADP-ribosylation factor 1, PFAM = PF00025)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00010327ctg020_953-4789' '(at3g09800 : 231.0) SNARE-like superfamily protein; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: clathrin vesicle coat; CONTAINS InterPro DOMAIN/s: Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT4G08520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38553 : 206.0) no description available & (gnl|cdd|35100 : 93.9) no description available & (reliability: 462.0) & (original description: Putative COPZ2, Description = Coatomer subunit zeta-2, PFAM = PF01217)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00010380ctg013_13513-17386' '(at2g39380 : 506.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H2 (EXO70H2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: leaf apex, hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H1 (TAIR:AT3G55150.1); Has 836 Blast hits to 829 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 44; Plants - 635; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|86233 : 492.0) no description available & (gnl|cdd|37555 : 490.0) no description available & (reliability: 1012.0) & (original description: Putative EXO70H2, Description = Exocyst subunit exo70 family protein H2, PFAM = PF03081)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00012308ctg011_7260-14203' '(at4g05000 : 319.0) vacuolar protein sorting-associated protein 28 homolog 1 (VPS28-1); CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated, VPS28, N-terminal (InterPro:IPR017898), Vacuolar protein sorting-associated, VPS28, C-terminal (InterPro:IPR017899), Vacuolar protein sorting-associated, VPS28 (InterPro:IPR007143); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting-associated protein 28 homolog 1 (TAIR:AT4G21560.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38494 : 293.0) no description available & (gnl|cdd|67606 : 245.0) no description available & (reliability: 638.0) & (original description: Putative vps28, Description = Vacuolar protein sorting-associated protein 28, PFAM = PF03997)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00015932ctg022_1-4236' '(at4g09160 : 402.0) SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), GOLD (InterPro:IPR009038), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G72160.1); Has 12185 Blast hits to 8606 proteins in 820 species: Archae - 53; Bacteria - 1604; Metazoa - 4851; Fungi - 2300; Plants - 1007; Viruses - 130; Other Eukaryotes - 2240 (source: NCBI BLink). & (gnl|cdd|36684 : 176.0) no description available & (gnl|cdd|29115 : 115.0) no description available & (reliability: 804.0) & (original description: Putative PATL1, Description = Patellin-1, PFAM = PF00650;PF03765)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00016699ctg004_18346-26881' '(at2g21520 : 903.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36684 : 276.0) no description available & (gnl|cdd|84928 : 139.0) no description available & (reliability: 1722.0) & (original description: Putative SFH8, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH8, PFAM = PF00650;PF03765)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00021964ctg003_11416-17945' '(at5g37680 : 317.0) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARL GTPases.; ADP-ribosylation factor-like A1A (ARLA1A); FUNCTIONS IN: GTP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor-like A1D (TAIR:AT5G67560.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35298 : 286.0) no description available & (gnl|cdd|58042 : 265.0) no description available & (p51822|arf1_dauca : 96.3) ADP-ribosylation factor 1 - Daucus carota (Carrot) & (reliability: 634.0) & (original description: Putative ARL8B, Description = ADP-ribosylation factor-like protein 8B, PFAM = PF00025)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00022086ctg008_6295-12384' '(at2g43640 : 105.0) Signal recognition particle, SRP9/SRP14 subunit; FUNCTIONS IN: endoplasmic reticulum signal peptide binding, 7S RNA binding, RNA binding; INVOLVED IN: negative regulation of translational elongation, protein targeting, SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: signal recognition particle, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Signal recognition particle, SRP14 subunit (InterPro:IPR003210), Signal recognition particle, SRP9/SRP14 subunit (InterPro:IPR009018). & (o04433|srp14_orysa : 103.0) Signal recognition particle 14 kDa protein (SRP14) - Oryza sativa (Rice) & (gnl|cdd|66018 : 99.7) no description available & (reliability: 210.0) & (original description: Putative SRP14, Description = Signal recognition particle 14 kDa protein, PFAM = PF02290)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00023179ctg010_330-3019' '(at1g60780 : 107.0) HAPLESS 13 (HAP13); INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: clathrin vesicle coat, clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Clathrin adaptor, mu subunit (InterPro:IPR001392), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G10730.1); Has 2206 Blast hits to 2139 proteins in 330 species: Archae - 0; Bacteria - 0; Metazoa - 1107; Fungi - 506; Plants - 213; Viruses - 0; Other Eukaryotes - 380 (source: NCBI BLink). & (gnl|cdd|36155 : 80.3) no description available & (reliability: 214.0) & (original description: Putative ap47, Description = AP-1 complex subunit mu-1, PFAM = PF00928)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00023406ctg001_541-7088' '(at4g35410 : 295.0) Clathrin adaptor complex small chain family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, clathrin vesicle coat, clathrin coat of trans-Golgi network vesicle, clathrin adaptor complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor AP1, sigma subunit (InterPro:IPR015604), Adaptor protein complex, sigma subunit (InterPro:IPR016635), Clathrin adaptor, sigma subunit/coatomer, zeta subunit (InterPro:IPR000804), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: associated protein 19 (TAIR:AT2G17380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36152 : 208.0) no description available & (gnl|cdd|34635 : 187.0) no description available & (o50016|ap2s1_maize : 150.0) AP-2 complex subunit sigma-1 (Clathrin coat assembly protein AP17) (Clathrin coat-associated protein AP17) (Plasma membrane adaptor AP-2 17 kDa protein) (Clathrin assembly protein 2 small chain) - Zea mays (Maize) & (reliability: 590.0) & (original description: Putative ap1, Description = AP-1 complex subunit sigma-2, PFAM = PF01217)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00024593ctg000_329-3917' '(at1g55690 : 123.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT5G56160.1); Has 2142 Blast hits to 2127 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 576; Fungi - 461; Plants - 793; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative Os08g0497300, Description = Os08g0497300 protein, PFAM = )' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00024593ctg001_1-4515' '(at1g55690 : 552.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT5G56160.1); Has 2142 Blast hits to 2127 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 576; Fungi - 461; Plants - 793; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|36684 : 234.0) no description available & (gnl|cdd|47819 : 125.0) no description available & (reliability: 1104.0) & (original description: Putative COW1, Description = Sec14 cytosolic factor, PFAM = PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00024593ctg001_503-4621' '(at1g55690 : 435.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT5G56160.1); Has 2142 Blast hits to 2127 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 576; Fungi - 461; Plants - 793; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|36684 : 183.0) no description available & (gnl|cdd|29115 : 95.9) no description available & (reliability: 870.0) & (original description: Putative COW1, Description = Sec14 cytosolic factor, PFAM = PF00650;PF03765)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00028351ctg009_1205-5045' '(at3g07680 : 290.0) emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT3G22845.1); Has 859 Blast hits to 859 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 431; Fungi - 210; Plants - 147; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|36905 : 188.0) no description available & (reliability: 580.0) & (original description: Putative At3g07680, Description = Transmembrane emp24 domain-containing protein p24beta2, PFAM = PF01105)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00035409ctg006_1-4395' '(at3g49870 : 155.0) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.; ADP-ribosylation factor-like A1C (ARLA1C); FUNCTIONS IN: GTP binding; LOCATED IN: nucleus, plasma membrane, vacuole, cytoplasm; EXPRESSED IN: male gametophyte, cultured cell, callus, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor-like A1D (TAIR:AT5G67560.1); Has 19452 Blast hits to 19446 proteins in 945 species: Archae - 22; Bacteria - 898; Metazoa - 8888; Fungi - 2713; Plants - 2635; Viruses - 3; Other Eukaryotes - 4293 (source: NCBI BLink). & (gnl|cdd|35298 : 146.0) no description available & (gnl|cdd|58042 : 138.0) no description available & (reliability: 310.0) & (original description: Putative ARL8B, Description = ADP-ribosylation factor-like protein 8B, PFAM = PF00025)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00035808ctg010_957-4868' '(at1g75170 : 410.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G36640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36683 : 292.0) no description available & (gnl|cdd|47819 : 123.0) no description available & (reliability: 820.0) & (original description: Putative Sb01g009680, Description = Putative uncharacterized protein Sb01g009680, PFAM = PF03765;PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00037099ctg004_1166-4180' '(at3g17440 : 375.0) member of NPSN Gene Family; novel plant snare 13 (NPSN13); FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: novel plant snare 12 (TAIR:AT1G48240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 736.0) & (original description: Putative NPSN13, Description = Novel plant SNARE 13, PFAM = )' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00037141ctg001_1014-10237' '(at1g10730 : 536.0) Clathrin adaptor complexes medium subunit family protein; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: clathrin vesicle coat, clathrin adaptor complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Clathrin adaptor, mu subunit (InterPro:IPR001392), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G60780.1); Has 2200 Blast hits to 2139 proteins in 330 species: Archae - 0; Bacteria - 0; Metazoa - 1104; Fungi - 504; Plants - 215; Viruses - 0; Other Eukaryotes - 377 (source: NCBI BLink). & (gnl|cdd|36155 : 394.0) no description available & (gnl|cdd|85129 : 215.0) no description available & (reliability: 1072.0) & (original description: Putative apm1, Description = AP-1 complex subunit mu, PFAM = PF01217;PF00928;PF00928)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00039909ctg001_12809-17413' '(at1g72160 : 370.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), GOLD (InterPro:IPR009038), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (TAIR:AT4G09160.1); Has 4473 Blast hits to 3903 proteins in 364 species: Archae - 35; Bacteria - 264; Metazoa - 1504; Fungi - 917; Plants - 883; Viruses - 13; Other Eukaryotes - 857 (source: NCBI BLink). & (gnl|cdd|36684 : 177.0) no description available & (gnl|cdd|29115 : 116.0) no description available & (reliability: 740.0) & (original description: Putative PATL2, Description = Patellin-2, PFAM = PF03765;PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00047418ctg004_2214-10819' '(at1g22180 : 355.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G08690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36683 : 285.0) no description available & (gnl|cdd|47819 : 124.0) no description available & (reliability: 710.0) & (original description: Putative Sb03g010320, Description = Putative uncharacterized protein Sb03g010320, PFAM = PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben044scf00055446ctg000_609-3576' '(at3g07680 : 83.2) emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT3G22845.1); Has 859 Blast hits to 859 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 431; Fungi - 210; Plants - 147; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative PGSC0003DMG400022168, Description = Emp24/gp25L/p24 family protein, PFAM = )' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101ctg16037_1127-6451' '(at2g21540 : 619.0) SEC14-like 3 (SFH3); FUNCTIONS IN: phosphatidylinositol transporter activity; INVOLVED IN: flower development, transport; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39180.1). & (gnl|cdd|36684 : 263.0) no description available & (gnl|cdd|84928 : 145.0) no description available & (reliability: 1238.0) & (original description: Putative Os05g0545000, Description = Os05g0545000 protein, PFAM = PF00650;PF03765)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf00083_268974-271603' '(at4g05000 : 308.0) vacuolar protein sorting-associated protein 28 homolog 1 (VPS28-1); CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated, VPS28, N-terminal (InterPro:IPR017898), Vacuolar protein sorting-associated, VPS28, C-terminal (InterPro:IPR017899), Vacuolar protein sorting-associated, VPS28 (InterPro:IPR007143); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting-associated protein 28 homolog 1 (TAIR:AT4G21560.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38494 : 284.0) no description available & (gnl|cdd|67606 : 240.0) no description available & (reliability: 616.0) & (original description: Putative vps28, Description = Vacuolar protein sorting-associated protein 28, PFAM = PF03997)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf00160_1105760-1110886' '(at2g34250 : 860.0) SecY protein transport family protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: response to salt stress, protein secretion; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SecY protein (InterPro:IPR002208), Translocon Sec61/SecY, plug domain (InterPro:IPR019561); BEST Arabidopsis thaliana protein match is: SecY protein transport family protein (TAIR:AT1G29310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36587 : 760.0) no description available & (gnl|cdd|82683 : 353.0) no description available & (reliability: 1720.0) & (original description: Putative sec61a, Description = Protein transport protein Sec61 subunit alpha, PFAM = PF10559;PF00344)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf00202_587425-594392' '(at2g18180 : 644.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: SEC14-like 12 (TAIR:AT4G36490.1); Has 2664 Blast hits to 2639 proteins in 234 species: Archae - 0; Bacteria - 0; Metazoa - 761; Fungi - 594; Plants - 895; Viruses - 1; Other Eukaryotes - 413 (source: NCBI BLink). & (gnl|cdd|36684 : 272.0) no description available & (gnl|cdd|84928 : 145.0) no description available & (reliability: 1288.0) & (original description: Putative SFH12, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH12, PFAM = PF03765;PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf00231_709917-716896' '(at1g10630 : 364.0) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.; ADP-ribosylation factor A1F (ARFA1F); FUNCTIONS IN: phospholipase activator activity, GTP binding, copper ion binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT2G47170.1); Has 15022 Blast hits to 15003 proteins in 509 species: Archae - 14; Bacteria - 51; Metazoa - 7710; Fungi - 1942; Plants - 2027; Viruses - 3; Other Eukaryotes - 3275 (source: NCBI BLink). & (p51823|arf2_orysa : 364.0) ADP-ribosylation factor 2 - Oryza sativa (Rice) & (gnl|cdd|47508 : 333.0) no description available & (gnl|cdd|35293 : 319.0) no description available & (reliability: 728.0) & (original description: Putative ARF, Description = ADP-ribosylation factor 2, PFAM = PF00025)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf00276_3518-16434' '(at4g24550 : 786.0) Clathrin adaptor complexes medium subunit family protein; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: clathrin vesicle coat, clathrin adaptor complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Clathrin adaptor, mu subunit (InterPro:IPR001392), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G10730.1). & (gnl|cdd|36155 : 427.0) no description available & (gnl|cdd|85129 : 120.0) no description available & (reliability: 1572.0) & (original description: Putative AP4M, Description = AP-4 complex subunit mu, PFAM = PF00928)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf00317_877816-883814' '(at5g47510 : 394.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: SEC14-like 3 (TAIR:AT2G21540.2); Has 2204 Blast hits to 2198 proteins in 226 species: Archae - 0; Bacteria - 0; Metazoa - 651; Fungi - 429; Plants - 772; Viruses - 0; Other Eukaryotes - 352 (source: NCBI BLink). & (gnl|cdd|36684 : 228.0) no description available & (gnl|cdd|84928 : 134.0) no description available & (reliability: 788.0) & (original description: Putative SFH11, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH11, PFAM = PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf00332_1145595-1150470' '(at3g62290 : 367.0) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.; ADP-ribosylation factor A1E (ARFA1E); CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), Ras small GTPase, Rab type (InterPro:IPR003579), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT2G47170.1). & (p51823|arf2_orysa : 360.0) ADP-ribosylation factor 2 - Oryza sativa (Rice) & (gnl|cdd|47508 : 334.0) no description available & (gnl|cdd|35293 : 316.0) no description available & (reliability: 734.0) & (original description: Putative ARF1, Description = ADP-ribosylation factor 1, PFAM = PF00025)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf00332_1360927-1376523' '(at1g56590 : 714.0) Involved in vesicle trafficking between the trans -Golgi network and vacuoles.; ZIG SUPPRESSOR 4 (ZIP4); INVOLVED IN: intracellular protein transport, gravitropism, protein targeting to vacuole; LOCATED IN: clathrin vesicle coat, clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit (InterPro:IPR001392), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G60780.1); Has 1984 Blast hits to 1954 proteins in 323 species: Archae - 0; Bacteria - 0; Metazoa - 926; Fungi - 482; Plants - 226; Viruses - 0; Other Eukaryotes - 350 (source: NCBI BLink). & (gnl|cdd|37951 : 521.0) no description available & (gnl|cdd|85129 : 132.0) no description available & (reliability: 1428.0) & (original description: Putative AP3M, Description = AP-3 complex subunit mu, PFAM = PF00928)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf00370_280699-285741' '(at5g27430 : 254.0) Signal peptidase subunit; FUNCTIONS IN: peptidase activity; INVOLVED IN: signal peptide processing; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Signal peptidase 22kDa subunit (InterPro:IPR007653); BEST Arabidopsis thaliana protein match is: Signal peptidase subunit (TAIR:AT3G05230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38582 : 192.0) no description available & (gnl|cdd|68156 : 170.0) no description available & (q9lgb4|spcs3_orysa : 114.0) Probable signal peptidase complex subunit 3 (EC 3.4.-.-) (Microsomal signal peptidase 22 kDa subunit) (SPase 22 kDa subunit) (SPC22) - Oryza sativa (Rice) & (reliability: 508.0) & (original description: Putative At5g27430, Description = Signal peptidase complex subunit 3B, PFAM = PF04573)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf00414_1053399-1057769' '(at3g07680 : 226.0) emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT3G22845.1); Has 859 Blast hits to 859 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 431; Fungi - 210; Plants - 147; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|36905 : 145.0) no description available & (reliability: 452.0) & (original description: Putative At3g07680, Description = Transmembrane emp24 domain-containing protein p24beta2, PFAM = PF01105)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf00482_44125-48523' '(at2g39380 : 512.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H2 (EXO70H2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: leaf apex, hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H1 (TAIR:AT3G55150.1); Has 836 Blast hits to 829 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 44; Plants - 635; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|37555 : 498.0) no description available & (gnl|cdd|86233 : 494.0) no description available & (reliability: 1024.0) & (original description: Putative EXO70H7, Description = AT5g59730/mth12_130, PFAM = PF03081)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf00482_45061-48445' '(at3g55150 : 293.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H1 (EXO70H1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, exocyst; EXPRESSED IN: sperm cell, root, pollen tube; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H2 (TAIR:AT2G39380.1); Has 814 Blast hits to 800 proteins in 89 species: Archae - 0; Bacteria - 0; Metazoa - 134; Fungi - 34; Plants - 631; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|37555 : 287.0) no description available & (gnl|cdd|86233 : 276.0) no description available & (reliability: 556.0) & (original description: Putative ACI49, Description = ACI49, PFAM = PF03081)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf00497_724335-729092' '(at1g01630 : 350.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G14820.3); Has 3015 Blast hits to 3010 proteins in 234 species: Archae - 0; Bacteria - 0; Metazoa - 1124; Fungi - 666; Plants - 866; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink). & (gnl|cdd|36683 : 221.0) no description available & (gnl|cdd|47819 : 117.0) no description available & (reliability: 700.0) & (original description: Putative glysoja_011978, Description = Random slug protein 5, PFAM = PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf00545_37023-45850' '(at1g67680 : 664.0) SRP72 RNA-binding domain; FUNCTIONS IN: 7S RNA binding; INVOLVED IN: SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: signal recognition particle; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Signal recognition particle, SRP72 subunit, RNA-binding (InterPro:IPR013699); BEST Arabidopsis thaliana protein match is: SRP72 RNA-binding domain (TAIR:AT1G67650.1); Has 655 Blast hits to 637 proteins in 232 species: Archae - 21; Bacteria - 65; Metazoa - 237; Fungi - 154; Plants - 42; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (gnl|cdd|37587 : 525.0) no description available & (reliability: 1328.0) & (original description: Putative BnaA07g26580D, Description = Signal recognition particle subunit SRP72, PFAM = PF08492;PF17004)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf00635_320403-324577' '(at1g13890 : 221.0) Encodes a member of a gene family homologous to mammalian SNAP25, a type of SNARE proteins with two chains. There are three members in Arabidopsis: SNAP30, SNAP29, and SNAP33.; soluble N-ethylmaleimide-sensitive factor adaptor protein 30 (SNAP30); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: vesicle-mediated transport, cellular membrane fusion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, seedling growth, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: soluble N-ethylmaleimide-sensitive factor adaptor protein 33 (TAIR:AT5G61210.1); Has 915 Blast hits to 914 proteins in 177 species: Archae - 0; Bacteria - 2; Metazoa - 570; Fungi - 86; Plants - 163; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|38275 : 139.0) no description available & (reliability: 442.0) & (original description: Putative BnaA09g45980D, Description = BnaA09g45980D protein, PFAM = )' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf00650_192557-206653' '(at1g60780 : 804.0) HAPLESS 13 (HAP13); INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: clathrin vesicle coat, clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Clathrin adaptor, mu subunit (InterPro:IPR001392), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G10730.1); Has 2206 Blast hits to 2139 proteins in 330 species: Archae - 0; Bacteria - 0; Metazoa - 1107; Fungi - 506; Plants - 213; Viruses - 0; Other Eukaryotes - 380 (source: NCBI BLink). & (gnl|cdd|36155 : 596.0) no description available & (gnl|cdd|85129 : 196.0) no description available & (reliability: 1608.0) & (original description: Putative AP1M2, Description = AP-1 complex subunit mu-2, PFAM = PF00928;PF01217)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf00739_476218-480101' '(at1g52600 : 176.0) Peptidase S24/S26A/S26B/S26C family protein; FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis, signal peptide processing; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B, conserved region (InterPro:IPR019759), Peptidase S26B, eukaryotic signal peptidase (InterPro:IPR001733), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927); BEST Arabidopsis thaliana protein match is: Peptidase S24/S26A/S26B/S26C family protein (TAIR:AT3G15710.1); Has 958 Blast hits to 958 proteins in 409 species: Archae - 89; Bacteria - 293; Metazoa - 225; Fungi - 153; Plants - 91; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|38552 : 142.0) no description available & (reliability: 352.0) & (original description: Putative twr, Description = Signal peptidase I, PFAM = )' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf00797_1656519-1707480' '(at1g67680 : 634.0) SRP72 RNA-binding domain; FUNCTIONS IN: 7S RNA binding; INVOLVED IN: SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: signal recognition particle; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Signal recognition particle, SRP72 subunit, RNA-binding (InterPro:IPR013699); BEST Arabidopsis thaliana protein match is: SRP72 RNA-binding domain (TAIR:AT1G67650.1); Has 655 Blast hits to 637 proteins in 232 species: Archae - 21; Bacteria - 65; Metazoa - 237; Fungi - 154; Plants - 42; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (gnl|cdd|37587 : 489.0) no description available & (reliability: 1268.0) & (original description: Putative At1g67650, Description = Signal recognition particle subunit SRP72, PFAM = PF08492;PF17004)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf00819_647888-655525' '(q9m5p8|snaa_soltu : 462.0) Alpha-soluble NSF attachment protein (Alpha-SNAP) (N-ethylmaleimide-sensitive factor attachment protein, alpha) - Solanum tuberosum (Potato) & (at3g56190 : 383.0) Encodes one of two alpha-SNAPs (soluble NSF attachment protein) in Arabidopsis; alpha-soluble NSF attachment protein 2 (ALPHA-SNAP2); FUNCTIONS IN: soluble NSF attachment protein activity, binding; INVOLVED IN: intracellular protein transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: male gametophyte, cultured cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: NSF attachment protein (InterPro:IPR000744), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: alpha-soluble NSF attachment protein 1 (TAIR:AT3G56450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36799 : 330.0) no description available & (reliability: 766.0) & (original description: Putative napa, Description = Alpha-soluble NSF attachment protein, PFAM = PF14938)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf00883_348741-354446' '(at4g36490 : 595.0) SEC14-like 12 (SFH12); CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT2G18180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36684 : 268.0) no description available & (gnl|cdd|84928 : 142.0) no description available & (reliability: 1190.0) & (original description: Putative COW1, Description = Sec14 cytosolic factor, PFAM = PF00650;PF03765)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf00893_218665-225641' '(at2g18180 : 638.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: SEC14-like 12 (TAIR:AT4G36490.1); Has 2664 Blast hits to 2639 proteins in 234 species: Archae - 0; Bacteria - 0; Metazoa - 761; Fungi - 594; Plants - 895; Viruses - 1; Other Eukaryotes - 413 (source: NCBI BLink). & (gnl|cdd|36684 : 270.0) no description available & (gnl|cdd|84928 : 146.0) no description available & (reliability: 1276.0) & (original description: Putative SFH3, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH3, PFAM = PF03765;PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf00893_224847-233055' '(at2g21520 : 813.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36684 : 276.0) no description available & (gnl|cdd|84928 : 139.0) no description available & (reliability: 1570.0) & (original description: Putative SFH8, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH8, PFAM = PF03765;PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf00927_243189-251135' '(at1g14820 : 313.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G01630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36683 : 134.0) no description available & (gnl|cdd|47819 : 87.7) no description available & (reliability: 626.0) & (original description: Putative BnaC08g39280D, Description = F10B6.22, PFAM = PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf01018_298630-310111' '(at3g24840 : 572.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: intracellular; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39170.1); Has 2612 Blast hits to 2599 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 823; Fungi - 527; Plants - 863; Viruses - 0; Other Eukaryotes - 399 (source: NCBI BLink). & (gnl|cdd|36684 : 247.0) no description available & (gnl|cdd|29115 : 127.0) no description available & (reliability: 1144.0) & (original description: Putative SFH9, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH9, PFAM = PF03765;PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf01061_460776-464811' '(at1g30690 : 404.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), GOLD (InterPro:IPR009038), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (TAIR:AT4G09160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36684 : 143.0) no description available & (gnl|cdd|29115 : 108.0) no description available & (reliability: 808.0) & (original description: Putative BnaC05g23700D, Description = BnaC05g23700D protein, PFAM = PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf01062_432155-438567' '(at4g30600 : 783.0) signal recognition particle receptor alpha subunit family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, signal recognition particle binding, GTP binding, GTPase activity, nucleotide binding; INVOLVED IN: intracellular protein transport, protein targeting, SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: endoplasmic reticulum, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Signal recognition particle receptor, alpha subunit, N-terminal (InterPro:IPR007222), Signal recognition particle, SRP54 subunit, helical bundle (InterPro:IPR013822), Signal recognition particle, SRP54 subunit, GTPase (InterPro:IPR000897); BEST Arabidopsis thaliana protein match is: signal recognition particle 54 kDa subunit (TAIR:AT1G15310.1); Has 16825 Blast hits to 16740 proteins in 2884 species: Archae - 472; Bacteria - 10592; Metazoa - 551; Fungi - 433; Plants - 279; Viruses - 3; Other Eukaryotes - 4495 (source: NCBI BLink). & (gnl|cdd|36000 : 618.0) no description available & (gnl|cdd|30898 : 226.0) no description available & (p49968|sr541_horvu : 96.3) Signal recognition particle 54 kDa protein 1 (SRP54) - Hordeum vulgare (Barley) & (reliability: 1566.0) & (original description: Putative SRPRA, Description = Signal recognition particle receptor subunit alpha, PFAM = PF00448;PF02881;PF04086)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf01063_757636-771971' '(at3g03120 : 373.0) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor 1; ARF 1 (GP:385340) {Drosophila melanogaster}, other ARFs and ARF-like proteins.; ADP-ribosylation factor B1C (ARFB1C); FUNCTIONS IN: GTP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor B1B (TAIR:AT5G17060.1); Has 12521 Blast hits to 12513 proteins in 459 species: Archae - 8; Bacteria - 10; Metazoa - 6191; Fungi - 1629; Plants - 2029; Viruses - 3; Other Eukaryotes - 2651 (source: NCBI BLink). & (gnl|cdd|58033 : 293.0) no description available & (gnl|cdd|35293 : 275.0) no description available & (p51824|arf1_soltu : 239.0) ADP-ribosylation factor 1 - Solanum tuberosum (Potato) & (reliability: 746.0) & (original description: Putative ARF, Description = Arf/Sar family, other, PFAM = PF00025)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf01090_446845-451350' '(at1g30690 : 308.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), GOLD (InterPro:IPR009038), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (TAIR:AT4G09160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36684 : 99.1) no description available & (gnl|cdd|29115 : 84.7) no description available & (reliability: 616.0) & (original description: Putative PATL1, Description = Patellin-4, PFAM = PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf01100_161534-165797' '(at3g07680 : 206.0) emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT3G22845.1); Has 859 Blast hits to 859 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 431; Fungi - 210; Plants - 147; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|36905 : 148.0) no description available & (reliability: 412.0) & (original description: Putative glysoja_022538, Description = Transmembrane emp24 domain-containing protein A, PFAM = PF01105)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf01153_20017-23973' '(at2g19790 : 255.0) SNARE-like superfamily protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, transport, protein transport; LOCATED IN: clathrin vesicle coat; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Adaptor protein complex, sigma subunit (InterPro:IPR016635), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT1G47830.1); Has 1921 Blast hits to 1920 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 856; Fungi - 405; Plants - 316; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink). & (gnl|cdd|36152 : 172.0) no description available & (gnl|cdd|34635 : 148.0) no description available & (o50016|ap2s1_maize : 111.0) AP-2 complex subunit sigma-1 (Clathrin coat assembly protein AP17) (Clathrin coat-associated protein AP17) (Plasma membrane adaptor AP-2 17 kDa protein) (Clathrin assembly protein 2 small chain) - Zea mays (Maize) & (reliability: 510.0) & (original description: Putative aps1, Description = AP-4 complex subunit sigma-1, PFAM = PF01217)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf01230_124727-138217' '(at1g10630 : 363.0) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.; ADP-ribosylation factor A1F (ARFA1F); FUNCTIONS IN: phospholipase activator activity, GTP binding, copper ion binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT2G47170.1); Has 15022 Blast hits to 15003 proteins in 509 species: Archae - 14; Bacteria - 51; Metazoa - 7710; Fungi - 1942; Plants - 2027; Viruses - 3; Other Eukaryotes - 3275 (source: NCBI BLink). & (p51823|arf2_orysa : 362.0) ADP-ribosylation factor 2 - Oryza sativa (Rice) & (gnl|cdd|47508 : 333.0) no description available & (gnl|cdd|35293 : 318.0) no description available & (reliability: 726.0) & (original description: Putative ARF, Description = ADP-ribosylation factor 2, PFAM = PF00025)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf01236_148151-157694' '(at3g17440 : 386.0) member of NPSN Gene Family; novel plant snare 13 (NPSN13); FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: novel plant snare 12 (TAIR:AT1G48240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 760.0) & (original description: Putative NPSN13, Description = Novel plant SNARE 13, PFAM = PF03908)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf01236_513015-517321' '(at3g62290 : 365.0) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.; ADP-ribosylation factor A1E (ARFA1E); CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), Ras small GTPase, Rab type (InterPro:IPR003579), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT2G47170.1). & (p51823|arf2_orysa : 358.0) ADP-ribosylation factor 2 - Oryza sativa (Rice) & (gnl|cdd|47508 : 333.0) no description available & (gnl|cdd|35293 : 315.0) no description available & (reliability: 730.0) & (original description: Putative ARF1, Description = ADP-ribosylation factor 1, PFAM = PF00025)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf01240_302911-310187' '(at1g52600 : 332.0) Peptidase S24/S26A/S26B/S26C family protein; FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis, signal peptide processing; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B, conserved region (InterPro:IPR019759), Peptidase S26B, eukaryotic signal peptidase (InterPro:IPR001733), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927); BEST Arabidopsis thaliana protein match is: Peptidase S24/S26A/S26B/S26C family protein (TAIR:AT3G15710.1); Has 958 Blast hits to 958 proteins in 409 species: Archae - 89; Bacteria - 293; Metazoa - 225; Fungi - 153; Plants - 91; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|38552 : 265.0) no description available & (reliability: 664.0) & (original description: Putative SEC11C, Description = Signal peptidase complex catalytic subunit SEC11C, PFAM = PF00717)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf01297_334173-338318' '(at3g51670 : 632.0) SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), GOLD (InterPro:IPR009038), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (TAIR:AT4G09160.1); Has 2976 Blast hits to 2970 proteins in 235 species: Archae - 0; Bacteria - 0; Metazoa - 1096; Fungi - 761; Plants - 842; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (gnl|cdd|36684 : 177.0) no description available & (gnl|cdd|47819 : 118.0) no description available & (reliability: 1264.0) & (original description: Putative PATL6, Description = Patellin-6, PFAM = PF03765;PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf01526_758722-794466' '(at5g46630 : 814.0) clathrin adaptor complexes medium subunit family protein, contains Pfam profile: PF00928 adaptor complexes medium subunit family; similar to micro-adaptins of clathrin coated vesicle adaptor complexes; Clathrin adaptor complexes medium subunit family protein; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: clathrin vesicle coat, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Clathrin adaptor, mu subunit (InterPro:IPR001392), Clathrin coat associated protein AP-50 (InterPro:IPR015629), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G60780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36156 : 658.0) no description available & (gnl|cdd|85129 : 182.0) no description available & (reliability: 1628.0) & (original description: Putative AP2M, Description = AP-2 complex subunit mu, PFAM = PF00928)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf01535_14196-47981' '(at3g07680 : 219.0) emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT3G22845.1); Has 859 Blast hits to 859 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 431; Fungi - 210; Plants - 147; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|36905 : 140.0) no description available & (reliability: 438.0) & (original description: Putative PGSC0003DMG400029794, Description = Transmembrane emp24 domain-containing protein p24beta2, PFAM = PF01105)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf01693_62146-73999' '(at5g05670 : 329.0) signal recognition particle binding; FUNCTIONS IN: signal recognition particle binding; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Signal recognition particle receptor, beta subunit (InterPro:IPR019009); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G18770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35313 : 250.0) no description available & (gnl|cdd|57988 : 188.0) no description available & (reliability: 658.0) & (original description: Putative SRP102, Description = Signal recognition particle receptor subunit beta, PFAM = PF09439)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf01782_1251640-1264674' '(at2g31530 : 692.0) Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid. Loss-of-function mutations result in arrest at the globular stage and embryo lethality.; EMBRYO DEFECTIVE 2289 (EMB2289); FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein secretion, embryo development ending in seed dormancy; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SecY protein (InterPro:IPR002208); BEST Arabidopsis thaliana protein match is: SECY homolog 1 (TAIR:AT2G18710.1); Has 8827 Blast hits to 8825 proteins in 2687 species: Archae - 73; Bacteria - 5355; Metazoa - 4; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 3299 (source: NCBI BLink). & (gnl|cdd|82857 : 228.0) no description available & (o63066|secy_maize : 121.0) Preprotein translocase secY subunit, chloroplast precursor (CpSecY) - Zea mays (Maize) & (reliability: 1384.0) & (original description: Putative SCY2, Description = Preprotein translocase subunit SCY2, chloroplastic, PFAM = PF00344)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf01785_525012-530943' '(at1g60970 : 237.0) SNARE-like superfamily protein; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: clathrin vesicle coat; EXPRESSED IN: leaf whorl, sperm cell, pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT3G09800.1); Has 621 Blast hits to 621 proteins in 219 species: Archae - 0; Bacteria - 0; Metazoa - 227; Fungi - 139; Plants - 149; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|38553 : 210.0) no description available & (gnl|cdd|35100 : 93.9) no description available & (reliability: 474.0) & (original description: Putative COPZ2, Description = Coatomer subunit zeta-2, PFAM = PF01217)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf01849_542113-549504' '(at1g55840 : 483.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT5G47730.1); Has 2029 Blast hits to 2027 proteins in 215 species: Archae - 0; Bacteria - 0; Metazoa - 638; Fungi - 402; Plants - 771; Viruses - 0; Other Eukaryotes - 218 (source: NCBI BLink). & (gnl|cdd|36684 : 162.0) no description available & (gnl|cdd|47819 : 97.7) no description available & (reliability: 966.0) & (original description: Putative Sb10g023760, Description = Putative uncharacterized protein Sb10g023760, PFAM = PF00650;PF03765)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf01964_836608-847038' '(at1g56590 : 717.0) Involved in vesicle trafficking between the trans -Golgi network and vacuoles.; ZIG SUPPRESSOR 4 (ZIP4); INVOLVED IN: intracellular protein transport, gravitropism, protein targeting to vacuole; LOCATED IN: clathrin vesicle coat, clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit (InterPro:IPR001392), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G60780.1); Has 1984 Blast hits to 1954 proteins in 323 species: Archae - 0; Bacteria - 0; Metazoa - 926; Fungi - 482; Plants - 226; Viruses - 0; Other Eukaryotes - 350 (source: NCBI BLink). & (gnl|cdd|37951 : 522.0) no description available & (gnl|cdd|85129 : 137.0) no description available & (reliability: 1434.0) & (original description: Putative AP3M, Description = AP-3 complex subunit mu, PFAM = PF00928)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf02155_287410-289700' '(gnl|cdd|38708 : 104.0) no description available & (at5g50460 : 93.6) secE/sec61-gamma protein transport protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, protein transport, protein targeting; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein translocase SEC61 complex gamma subunit (InterPro:IPR008158), Protein secE/sec61-gamma protein (InterPro:IPR001901); BEST Arabidopsis thaliana protein match is: secE/sec61-gamma protein transport protein (TAIR:AT4G24920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p38385|sc61g_orysa : 93.2) Protein transport protein SEC61 subunit gamma - Oryza sativa (Rice) & (reliability: 187.2) & (original description: Putative SEC61G1, Description = Protein transport protein Sec61 subunit gamma-1, PFAM = PF00584)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf02207_342524-356886' '(at1g60780 : 759.0) HAPLESS 13 (HAP13); INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: clathrin vesicle coat, clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Clathrin adaptor, mu subunit (InterPro:IPR001392), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G10730.1); Has 2206 Blast hits to 2139 proteins in 330 species: Archae - 0; Bacteria - 0; Metazoa - 1107; Fungi - 506; Plants - 213; Viruses - 0; Other Eukaryotes - 380 (source: NCBI BLink). & (gnl|cdd|36155 : 561.0) no description available & (gnl|cdd|85129 : 196.0) no description available & (reliability: 1518.0) & (original description: Putative apm1, Description = AP-1 complex subunit mu-1, PFAM = PF00928;PF01217)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf02211_509976-518378' '(at1g14820 : 313.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G01630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36683 : 135.0) no description available & (gnl|cdd|47819 : 93.1) no description available & (reliability: 626.0) & (original description: Putative BnaC08g39280D, Description = F10B6.22, PFAM = PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf02249_372854-381358' '(at5g17060 : 374.0) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor 1; ARF 1 (GP:385340) {Drosophila melanogaster), other ARFs and ARF-like proteins.; ADP-ribosylation factor B1B (ARFB1B); FUNCTIONS IN: GTP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor B1C (TAIR:AT3G03120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58033 : 293.0) no description available & (gnl|cdd|35293 : 276.0) no description available & (p51824|arf1_soltu : 241.0) ADP-ribosylation factor 1 - Solanum tuberosum (Potato) & (reliability: 748.0) & (original description: Putative arf1, Description = ADP-ribosylation factor, PFAM = PF00025)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf02430_54029-58294' '(at3g51670 : 636.0) SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), GOLD (InterPro:IPR009038), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (TAIR:AT4G09160.1); Has 2976 Blast hits to 2970 proteins in 235 species: Archae - 0; Bacteria - 0; Metazoa - 1096; Fungi - 761; Plants - 842; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (gnl|cdd|36684 : 180.0) no description available & (gnl|cdd|47819 : 121.0) no description available & (reliability: 1272.0) & (original description: Putative PATL6, Description = Patellin-6, PFAM = PF00650;PF03765)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf02562_66705-72508' '(at4g30600 : 796.0) signal recognition particle receptor alpha subunit family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, signal recognition particle binding, GTP binding, GTPase activity, nucleotide binding; INVOLVED IN: intracellular protein transport, protein targeting, SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: endoplasmic reticulum, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Signal recognition particle receptor, alpha subunit, N-terminal (InterPro:IPR007222), Signal recognition particle, SRP54 subunit, helical bundle (InterPro:IPR013822), Signal recognition particle, SRP54 subunit, GTPase (InterPro:IPR000897); BEST Arabidopsis thaliana protein match is: signal recognition particle 54 kDa subunit (TAIR:AT1G15310.1); Has 16825 Blast hits to 16740 proteins in 2884 species: Archae - 472; Bacteria - 10592; Metazoa - 551; Fungi - 433; Plants - 279; Viruses - 3; Other Eukaryotes - 4495 (source: NCBI BLink). & (gnl|cdd|36000 : 643.0) no description available & (gnl|cdd|30898 : 248.0) no description available & (p49968|sr541_horvu : 110.0) Signal recognition particle 54 kDa protein 1 (SRP54) - Hordeum vulgare (Barley) & (reliability: 1592.0) & (original description: Putative srpR, Description = Signal recognition particle receptor subunit alpha, PFAM = PF04086;PF00448;PF02881)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf02819_491501-495038' '(at1g48900 : 318.0) Signal recognition particle, SRP54 subunit protein; FUNCTIONS IN: 7S RNA binding, mRNA binding, nucleoside-triphosphatase activity, GTP binding, nucleotide binding; INVOLVED IN: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition, SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: signal recognition particle, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Signal recognition particle, SRP54 subunit, helical bundle (InterPro:IPR013822), Signal recognition particle, SRP54 subunit, M-domain (InterPro:IPR004125), Signal recognition particle, SRP54 subunit (InterPro:IPR006325), Signal recognition particle, SRP54 subunit, GTPase (InterPro:IPR000897); BEST Arabidopsis thaliana protein match is: signal recognition particle 54 kDa subunit (TAIR:AT1G15310.1); Has 17287 Blast hits to 17282 proteins in 2918 species: Archae - 472; Bacteria - 10591; Metazoa - 363; Fungi - 288; Plants - 279; Viruses - 1; Other Eukaryotes - 5293 (source: NCBI BLink). & (p49969|sr542_horvu : 307.0) Signal recognition particle 54 kDa protein 2 (SRP54) - Hordeum vulgare (Barley) & (gnl|cdd|35999 : 302.0) no description available & (gnl|cdd|30887 : 238.0) no description available & (reliability: 636.0) & (original description: Putative srp54, Description = Signal recognition particle 54 kDa protein, PFAM = PF00448)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf02910_188187-201108' '(at5g52280 : 353.0) Myosin heavy chain-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Myosin heavy chain-related protein (TAIR:AT1G63300.1); Has 217843 Blast hits to 105430 proteins in 3541 species: Archae - 2871; Bacteria - 41932; Metazoa - 88690; Fungi - 17315; Plants - 10871; Viruses - 1027; Other Eukaryotes - 55137 (source: NCBI BLink). & (gnl|cdd|35383 : 83.0) no description available & (reliability: 706.0) & (original description: Putative PGSC0003DMG400014292, Description = Putative ovule protein, PFAM = PF10358)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf02947_381760-389129' '(at2g17380 : 295.0) Encodes clathrin assembly protein AP19.; associated protein 19 (AP19); FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, mitochondrion, clathrin vesicle coat, clathrin coat of trans-Golgi network vesicle, clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor AP1, sigma subunit (InterPro:IPR015604), Adaptor protein complex, sigma subunit (InterPro:IPR016635), Clathrin adaptor, sigma subunit/coatomer, zeta subunit (InterPro:IPR000804), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complex small chain family protein (TAIR:AT4G35410.2); Has 1854 Blast hits to 1853 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 748; Fungi - 497; Plants - 257; Viruses - 0; Other Eukaryotes - 352 (source: NCBI BLink). & (gnl|cdd|36152 : 210.0) no description available & (gnl|cdd|34635 : 186.0) no description available & (o50016|ap2s1_maize : 150.0) AP-2 complex subunit sigma-1 (Clathrin coat assembly protein AP17) (Clathrin coat-associated protein AP17) (Plasma membrane adaptor AP-2 17 kDa protein) (Clathrin assembly protein 2 small chain) - Zea mays (Maize) & (reliability: 590.0) & (original description: Putative ap1, Description = AP-1 complex subunit sigma-2, PFAM = PF01217)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf03045_868203-880807' '(at1g60780 : 806.0) HAPLESS 13 (HAP13); INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: clathrin vesicle coat, clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Clathrin adaptor, mu subunit (InterPro:IPR001392), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G10730.1); Has 2206 Blast hits to 2139 proteins in 330 species: Archae - 0; Bacteria - 0; Metazoa - 1107; Fungi - 506; Plants - 213; Viruses - 0; Other Eukaryotes - 380 (source: NCBI BLink). & (gnl|cdd|36155 : 594.0) no description available & (gnl|cdd|85129 : 202.0) no description available & (reliability: 1612.0) & (original description: Putative AP1M2, Description = AP-1 complex subunit mu-2, PFAM = PF01217;PF00928)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf03255_31841-38916' '(at5g47730 : 440.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G55840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36684 : 159.0) no description available & (gnl|cdd|47819 : 100.0) no description available & (reliability: 880.0) & (original description: Putative Sb10g023760, Description = Putative uncharacterized protein Sb10g023760, PFAM = PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf03455_211341-214559' '(at1g53530 : 183.0) Peptidase S24/S26A/S26B/S26C family protein; FUNCTIONS IN: serine-type peptidase activity, peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (InterPro:IPR011056), Peptidase S24/S26A/S26B, conserved region (InterPro:IPR019759), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927), Peptidase S26A, signal peptidase I, conserved site (InterPro:IPR019758), Peptidase S26, conserved region (InterPro:IPR019533), Peptidase S26A, signal peptidase I (InterPro:IPR000223); BEST Arabidopsis thaliana protein match is: Peptidase S24/S26A/S26B/S26C family protein (TAIR:AT1G29960.1); Has 3355 Blast hits to 3350 proteins in 1043 species: Archae - 0; Bacteria - 2238; Metazoa - 246; Fungi - 222; Plants - 262; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink). & (gnl|cdd|35392 : 155.0) no description available & (reliability: 366.0) & (original description: Putative 3212, Description = Mitochondrial inner membrane protease subunit 1, PFAM = PF00717)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf03532_139392-143535' '(gnl|cdd|37555 : 499.0) no description available & (gnl|cdd|86233 : 494.0) no description available & (at3g55150 : 437.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H1 (EXO70H1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, exocyst; EXPRESSED IN: sperm cell, root, pollen tube; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H2 (TAIR:AT2G39380.1); Has 814 Blast hits to 800 proteins in 89 species: Archae - 0; Bacteria - 0; Metazoa - 134; Fungi - 34; Plants - 631; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 872.0) & (original description: Putative EXO70H7, Description = AT5g59730/mth12_130, PFAM = PF03081)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf03548_48076-52946' '(at1g01630 : 305.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G14820.3); Has 3015 Blast hits to 3010 proteins in 234 species: Archae - 0; Bacteria - 0; Metazoa - 1124; Fungi - 666; Plants - 866; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink). & (gnl|cdd|36683 : 211.0) no description available & (gnl|cdd|29115 : 128.0) no description available & (reliability: 610.0) & (original description: Putative PGSC0003DMG400014173, Description = Polyphosphoinositide-binding protein, PFAM = PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf03747_524132-530037' '(at3g49870 : 334.0) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.; ADP-ribosylation factor-like A1C (ARLA1C); FUNCTIONS IN: GTP binding; LOCATED IN: nucleus, plasma membrane, vacuole, cytoplasm; EXPRESSED IN: male gametophyte, cultured cell, callus, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor-like A1D (TAIR:AT5G67560.1); Has 19452 Blast hits to 19446 proteins in 945 species: Archae - 22; Bacteria - 898; Metazoa - 8888; Fungi - 2713; Plants - 2635; Viruses - 3; Other Eukaryotes - 4293 (source: NCBI BLink). & (gnl|cdd|35298 : 298.0) no description available & (gnl|cdd|58042 : 278.0) no description available & (p49076|arf_maize : 110.0) ADP-ribosylation factor - Zea mays (Maize) & (reliability: 668.0) & (original description: Putative ARL8B, Description = ADP-ribosylation factor-like protein 8B, PFAM = PF00025)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf04283_747763-761422' '(at2g31530 : 678.0) Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid. Loss-of-function mutations result in arrest at the globular stage and embryo lethality.; EMBRYO DEFECTIVE 2289 (EMB2289); FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein secretion, embryo development ending in seed dormancy; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SecY protein (InterPro:IPR002208); BEST Arabidopsis thaliana protein match is: SECY homolog 1 (TAIR:AT2G18710.1); Has 8827 Blast hits to 8825 proteins in 2687 species: Archae - 73; Bacteria - 5355; Metazoa - 4; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 3299 (source: NCBI BLink). & (gnl|cdd|82857 : 230.0) no description available & (o63066|secy_maize : 122.0) Preprotein translocase secY subunit, chloroplast precursor (CpSecY) - Zea mays (Maize) & (reliability: 1356.0) & (original description: Putative SCY2, Description = Preprotein translocase subunit SCY2, chloroplastic, PFAM = PF00344)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf04557_434790-441077' '(at5g05670 : 358.0) signal recognition particle binding; FUNCTIONS IN: signal recognition particle binding; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Signal recognition particle receptor, beta subunit (InterPro:IPR019009); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G18770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35313 : 250.0) no description available & (gnl|cdd|57988 : 190.0) no description available & (reliability: 716.0) & (original description: Putative SRP102, Description = Signal recognition particle receptor subunit beta, PFAM = PF09439)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf04562_91798-98606' '(at1g48900 : 796.0) Signal recognition particle, SRP54 subunit protein; FUNCTIONS IN: 7S RNA binding, mRNA binding, nucleoside-triphosphatase activity, GTP binding, nucleotide binding; INVOLVED IN: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition, SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: signal recognition particle, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Signal recognition particle, SRP54 subunit, helical bundle (InterPro:IPR013822), Signal recognition particle, SRP54 subunit, M-domain (InterPro:IPR004125), Signal recognition particle, SRP54 subunit (InterPro:IPR006325), Signal recognition particle, SRP54 subunit, GTPase (InterPro:IPR000897); BEST Arabidopsis thaliana protein match is: signal recognition particle 54 kDa subunit (TAIR:AT1G15310.1); Has 17287 Blast hits to 17282 proteins in 2918 species: Archae - 472; Bacteria - 10591; Metazoa - 363; Fungi - 288; Plants - 279; Viruses - 1; Other Eukaryotes - 5293 (source: NCBI BLink). & (p49968|sr541_horvu : 752.0) Signal recognition particle 54 kDa protein 1 (SRP54) - Hordeum vulgare (Barley) & (gnl|cdd|35999 : 687.0) no description available & (gnl|cdd|30887 : 453.0) no description available & (reliability: 1592.0) & (original description: Putative srp54, Description = Signal recognition particle 54 kDa protein, PFAM = PF02978;PF00448;PF02881)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf04607_174897-180473' '(at3g49870 : 345.0) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.; ADP-ribosylation factor-like A1C (ARLA1C); FUNCTIONS IN: GTP binding; LOCATED IN: nucleus, plasma membrane, vacuole, cytoplasm; EXPRESSED IN: male gametophyte, cultured cell, callus, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor-like A1D (TAIR:AT5G67560.1); Has 19452 Blast hits to 19446 proteins in 945 species: Archae - 22; Bacteria - 898; Metazoa - 8888; Fungi - 2713; Plants - 2635; Viruses - 3; Other Eukaryotes - 4293 (source: NCBI BLink). & (gnl|cdd|35298 : 300.0) no description available & (gnl|cdd|58042 : 279.0) no description available & (p49076|arf_maize : 108.0) ADP-ribosylation factor - Zea mays (Maize) & (reliability: 690.0) & (original description: Putative ARL8A, Description = ADP-ribosylation factor-like protein 8A, PFAM = PF00025)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf04644_72542-80524' '(at2g43640 : 109.0) Signal recognition particle, SRP9/SRP14 subunit; FUNCTIONS IN: endoplasmic reticulum signal peptide binding, 7S RNA binding, RNA binding; INVOLVED IN: negative regulation of translational elongation, protein targeting, SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: signal recognition particle, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Signal recognition particle, SRP14 subunit (InterPro:IPR003210), Signal recognition particle, SRP9/SRP14 subunit (InterPro:IPR009018). & (o04433|srp14_orysa : 108.0) Signal recognition particle 14 kDa protein (SRP14) - Oryza sativa (Rice) & (gnl|cdd|66018 : 105.0) no description available & (reliability: 218.0) & (original description: Putative SRP14, Description = Signal recognition particle 14 kDa protein, PFAM = PF02290)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf04732_127385-135464' '(at3g49100 : 164.0) Signal recognition particle, SRP9/SRP14 subunit; FUNCTIONS IN: 7S RNA binding, signal recognition particle binding; INVOLVED IN: negative regulation of translational elongation, SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: signal recognition particle; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal recognition particle, SRP9/SRP14 subunit (InterPro:IPR009018), Signal recognition particle, SRP9 subunit (InterPro:IPR008832); Has 222 Blast hits to 222 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 140; Fungi - 16; Plants - 42; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (o04438|srp09_maize : 156.0) Signal recognition particle 9 kDa protein (SRP9) - Zea mays (Maize) & (gnl|cdd|38675 : 121.0) no description available & (gnl|cdd|86874 : 113.0) no description available & (reliability: 328.0) & (original description: Putative SRP9, Description = Signal recognition particle 9 kDa protein, PFAM = PF05486)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf04785_216581-228678' '(gnl|cdd|71337 : 180.0) no description available & (at5g48385 : 128.0) FRIGIDA-like protein; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT4G14900.1); Has 1269 Blast hits to 1187 proteins in 101 species: Archae - 0; Bacteria - 22; Metazoa - 72; Fungi - 9; Plants - 1133; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|35383 : 126.0) no description available & (reliability: 242.0) & (original description: Putative PGSC0003DMG400022488, Description = Putative myosin-10-like, PFAM = PF07899;PF07899;PF07899)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf04945_45965-53260' '(at1g53530 : 224.0) Peptidase S24/S26A/S26B/S26C family protein; FUNCTIONS IN: serine-type peptidase activity, peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (InterPro:IPR011056), Peptidase S24/S26A/S26B, conserved region (InterPro:IPR019759), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927), Peptidase S26A, signal peptidase I, conserved site (InterPro:IPR019758), Peptidase S26, conserved region (InterPro:IPR019533), Peptidase S26A, signal peptidase I (InterPro:IPR000223); BEST Arabidopsis thaliana protein match is: Peptidase S24/S26A/S26B/S26C family protein (TAIR:AT1G29960.1); Has 3355 Blast hits to 3350 proteins in 1043 species: Archae - 0; Bacteria - 2238; Metazoa - 246; Fungi - 222; Plants - 262; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink). & (gnl|cdd|35392 : 157.0) no description available & (reliability: 448.0) & (original description: Putative At1g53530, Description = At1g53530, PFAM = PF00717)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf05206_659346-675814' '(at3g46450 : 350.0) SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); BEST Arabidopsis thaliana protein match is: SEC14-like 3 (TAIR:AT2G21540.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36683 : 93.9) no description available & (gnl|cdd|47819 : 93.1) no description available & (reliability: 700.0) & (original description: Putative PGSC0003DMG400023525, Description = CRAL-TRIO domain-containing protein, PFAM = PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf05217_445770-449913' '(at4g35410 : 223.0) Clathrin adaptor complex small chain family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, clathrin vesicle coat, clathrin coat of trans-Golgi network vesicle, clathrin adaptor complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor AP1, sigma subunit (InterPro:IPR015604), Adaptor protein complex, sigma subunit (InterPro:IPR016635), Clathrin adaptor, sigma subunit/coatomer, zeta subunit (InterPro:IPR000804), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: associated protein 19 (TAIR:AT2G17380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36152 : 178.0) no description available & (gnl|cdd|34635 : 163.0) no description available & (o50016|ap2s1_maize : 127.0) AP-2 complex subunit sigma-1 (Clathrin coat assembly protein AP17) (Clathrin coat-associated protein AP17) (Plasma membrane adaptor AP-2 17 kDa protein) (Clathrin assembly protein 2 small chain) - Zea mays (Maize) & (reliability: 446.0) & (original description: Putative ap1, Description = AP-1 complex subunit sigma-2, PFAM = PF01217)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf05329_39948-49884' '(q9m5p8|snaa_soltu : 464.0) Alpha-soluble NSF attachment protein (Alpha-SNAP) (N-ethylmaleimide-sensitive factor attachment protein, alpha) - Solanum tuberosum (Potato) & (at3g56190 : 382.0) Encodes one of two alpha-SNAPs (soluble NSF attachment protein) in Arabidopsis; alpha-soluble NSF attachment protein 2 (ALPHA-SNAP2); FUNCTIONS IN: soluble NSF attachment protein activity, binding; INVOLVED IN: intracellular protein transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: male gametophyte, cultured cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: NSF attachment protein (InterPro:IPR000744), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: alpha-soluble NSF attachment protein 1 (TAIR:AT3G56450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36799 : 328.0) no description available & (reliability: 764.0) & (original description: Putative napa, Description = Alpha-soluble NSF attachment protein, PFAM = PF14938)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf05506_370979-383341' '(at3g46450 : 484.0) SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); BEST Arabidopsis thaliana protein match is: SEC14-like 3 (TAIR:AT2G21540.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47819 : 91.2) no description available & (gnl|cdd|36684 : 80.2) no description available & (reliability: 968.0) & (original description: Putative BnaC03g53690D, Description = BnaC03g53690D protein, PFAM = PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf05829_24982-33056' '(at3g07680 : 273.0) emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT3G22845.1); Has 859 Blast hits to 859 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 431; Fungi - 210; Plants - 147; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|36905 : 190.0) no description available & (reliability: 546.0) & (original description: Putative At3g07680, Description = Transmembrane emp24 domain-containing protein p24beta2, PFAM = PF01105)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf05948_716401-722921' '(at2g34250 : 844.0) SecY protein transport family protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: response to salt stress, protein secretion; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SecY protein (InterPro:IPR002208), Translocon Sec61/SecY, plug domain (InterPro:IPR019561); BEST Arabidopsis thaliana protein match is: SecY protein transport family protein (TAIR:AT1G29310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36587 : 742.0) no description available & (gnl|cdd|82683 : 344.0) no description available & (reliability: 1688.0) & (original description: Putative sec61a, Description = Protein transport protein Sec61 subunit alpha, PFAM = PF10559;PF00344)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf06091_575750-595739' '(at1g48900 : 819.0) Signal recognition particle, SRP54 subunit protein; FUNCTIONS IN: 7S RNA binding, mRNA binding, nucleoside-triphosphatase activity, GTP binding, nucleotide binding; INVOLVED IN: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition, SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: signal recognition particle, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Signal recognition particle, SRP54 subunit, helical bundle (InterPro:IPR013822), Signal recognition particle, SRP54 subunit, M-domain (InterPro:IPR004125), Signal recognition particle, SRP54 subunit (InterPro:IPR006325), Signal recognition particle, SRP54 subunit, GTPase (InterPro:IPR000897); BEST Arabidopsis thaliana protein match is: signal recognition particle 54 kDa subunit (TAIR:AT1G15310.1); Has 17287 Blast hits to 17282 proteins in 2918 species: Archae - 472; Bacteria - 10591; Metazoa - 363; Fungi - 288; Plants - 279; Viruses - 1; Other Eukaryotes - 5293 (source: NCBI BLink). & (p49969|sr542_horvu : 773.0) Signal recognition particle 54 kDa protein 2 (SRP54) - Hordeum vulgare (Barley) & (gnl|cdd|35999 : 679.0) no description available & (gnl|cdd|30887 : 459.0) no description available & (reliability: 1638.0) & (original description: Putative srp54, Description = Signal recognition particle 54 kDa protein, PFAM = PF02881;PF00448;PF02978)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf06144_15582-19480' '(gnl|cdd|86233 : 478.0) no description available & (gnl|cdd|37555 : 476.0) no description available & (at2g39380 : 435.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H2 (EXO70H2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: leaf apex, hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H1 (TAIR:AT3G55150.1); Has 836 Blast hits to 829 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 44; Plants - 635; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 870.0) & (original description: Putative EXO70H2, Description = Exocyst subunit exo70 family protein H2, PFAM = PF03081)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf06375_221883-227267' '(at1g22180 : 339.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G08690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36683 : 288.0) no description available & (gnl|cdd|47819 : 125.0) no description available & (reliability: 678.0) & (original description: Putative Sb03g010320, Description = Putative uncharacterized protein Sb03g010320, PFAM = PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf06436_584704-586955' '(at3g60540 : 80.1) Preprotein translocase Sec, Sec61-beta subunit protein; CONTAINS InterPro DOMAIN/s: Preprotein translocase Sec, Sec61-beta subunit, eukarya (InterPro:IPR016482), Preprotein translocase Sec, Sec61-beta subunit (InterPro:IPR005609); BEST Arabidopsis thaliana protein match is: Preprotein translocase Sec, Sec61-beta subunit protein (TAIR:AT2G45070.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative At2g45070, Description = Protein transport protein Sec61 subunit beta, PFAM = PF03911)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf06590_702369-706319' '(gnl|cdd|86233 : 476.0) no description available & (gnl|cdd|37555 : 470.0) no description available & (at3g09520 : 434.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H4 (EXO70H4); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: stem, sperm cell, stamen, pollen tube; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H3 (TAIR:AT3G09530.1); Has 837 Blast hits to 827 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 71; Plants - 622; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 854.0) & (original description: Putative BnaA06g04270D, Description = BnaA06g04270D protein, PFAM = PF03081)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf06822_131120-144044' '(at5g46630 : 815.0) clathrin adaptor complexes medium subunit family protein, contains Pfam profile: PF00928 adaptor complexes medium subunit family; similar to micro-adaptins of clathrin coated vesicle adaptor complexes; Clathrin adaptor complexes medium subunit family protein; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: clathrin vesicle coat, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Clathrin adaptor, mu subunit (InterPro:IPR001392), Clathrin coat associated protein AP-50 (InterPro:IPR015629), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G60780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36156 : 647.0) no description available & (gnl|cdd|85129 : 181.0) no description available & (reliability: 1630.0) & (original description: Putative AP2M, Description = AP-2 complex subunit mu, PFAM = PF00928)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf06901_70335-80598' '(at3g22950 : 339.0) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor GB:P91924 (Dugesia japonica), other ARFs and ARF-like proteins.; ADP-ribosylation factor C1 (ARFC1); FUNCTIONS IN: GTP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor 1 (TAIR:AT1G23490.1). & (gnl|cdd|58036 : 298.0) no description available & (gnl|cdd|35293 : 258.0) no description available & (p51824|arf1_soltu : 201.0) ADP-ribosylation factor 1 - Solanum tuberosum (Potato) & (reliability: 678.0) & (original description: Putative arl5, Description = ADP-ribosylation factor-like protein 5, PFAM = PF00025)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf07763_96395-102450' '(at1g11890 : 404.0) member of SEC22 Gene Family; SECRETION 22 (SEC22); FUNCTIONS IN: transporter activity; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT5G52270.1); Has 1577 Blast hits to 1577 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 548; Fungi - 342; Plants - 449; Viruses - 0; Other Eukaryotes - 238 (source: NCBI BLink). & (gnl|cdd|36080 : 259.0) no description available & (gnl|cdd|34744 : 105.0) no description available & (reliability: 808.0) & (original description: Putative SEC22, Description = 25.3 kDa vesicle transport protein, PFAM = PF00957;PF13774)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf07790_165631-171841' '(at4g05000 : 318.0) vacuolar protein sorting-associated protein 28 homolog 1 (VPS28-1); CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated, VPS28, N-terminal (InterPro:IPR017898), Vacuolar protein sorting-associated, VPS28, C-terminal (InterPro:IPR017899), Vacuolar protein sorting-associated, VPS28 (InterPro:IPR007143); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting-associated protein 28 homolog 1 (TAIR:AT4G21560.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38494 : 291.0) no description available & (gnl|cdd|67606 : 244.0) no description available & (reliability: 636.0) & (original description: Putative vps28, Description = Vacuolar protein sorting-associated protein 28, PFAM = PF03997)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf07792_91153-92699' '(at5g60460 : 84.3) Preprotein translocase Sec, Sec61-beta subunit protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein transport; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Preprotein translocase Sec, Sec61-beta subunit, eukarya (InterPro:IPR016482), Preprotein translocase Sec, Sec61-beta subunit (InterPro:IPR005609); BEST Arabidopsis thaliana protein match is: Preprotein translocase Sec, Sec61-beta subunit protein (TAIR:AT3G60540.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative At2g45070, Description = Protein transport protein Sec61 subunit beta, PFAM = PF03911)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf08162_72592-78931' '(at4g36640 : 366.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G75170.2); Has 1767 Blast hits to 1763 proteins in 213 species: Archae - 0; Bacteria - 0; Metazoa - 475; Fungi - 541; Plants - 540; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|36683 : 275.0) no description available & (gnl|cdd|29115 : 117.0) no description available & (reliability: 732.0) & (original description: Putative Sb01g009680, Description = Putative uncharacterized protein Sb01g009680, PFAM = PF00650;PF03765)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf08203_22715-34261' '(at1g22180 : 311.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G08690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36683 : 252.0) no description available & (gnl|cdd|47819 : 121.0) no description available & (reliability: 622.0) & (original description: Putative Os01g0264700, Description = Os01g0264700 protein, PFAM = PF00650;PF03765)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf08326_122350-127717' '(p49964|srp19_orysa : 164.0) Signal recognition particle 19 kDa protein (SRP19) - Oryza sativa (Rice) & (at1g48160 : 154.0) signal recognition particle 19 kDa protein, putative / SRP19, putative; FUNCTIONS IN: 7S RNA binding; INVOLVED IN: protein targeting, SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: signal recognition particle, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Signal recognition particle, SRP19 subunit (InterPro:IPR002778); Has 500 Blast hits to 499 proteins in 236 species: Archae - 81; Bacteria - 0; Metazoa - 158; Fungi - 144; Plants - 60; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|38408 : 126.0) no description available & (reliability: 308.0) & (original description: Putative SRP19, Description = Signal recognition particle 19 kDa protein, PFAM = PF01922)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf08376_62760-67260' '(at1g75170 : 437.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G36640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36683 : 301.0) no description available & (gnl|cdd|29115 : 123.0) no description available & (reliability: 874.0) & (original description: Putative Sb01g009680, Description = Putative uncharacterized protein Sb01g009680, PFAM = PF03765;PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf08415_249374-257960' '(at5g52280 : 292.0) Myosin heavy chain-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Myosin heavy chain-related protein (TAIR:AT1G63300.1); Has 217843 Blast hits to 105430 proteins in 3541 species: Archae - 2871; Bacteria - 41932; Metazoa - 88690; Fungi - 17315; Plants - 10871; Viruses - 1027; Other Eukaryotes - 55137 (source: NCBI BLink). & (reliability: 584.0) & (original description: Putative PGSC0003DMG400014292, Description = Putative ovule protein, PFAM = PF10358)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf08630_29024-33091' '(at1g01630 : 294.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G14820.3); Has 3015 Blast hits to 3010 proteins in 234 species: Archae - 0; Bacteria - 0; Metazoa - 1124; Fungi - 666; Plants - 866; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink). & (gnl|cdd|36683 : 210.0) no description available & (gnl|cdd|47819 : 123.0) no description available & (reliability: 588.0) & (original description: Putative glysoja_011978, Description = Random slug protein 5, PFAM = PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf09170_309977-317290' '(at1g60970 : 244.0) SNARE-like superfamily protein; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: clathrin vesicle coat; EXPRESSED IN: leaf whorl, sperm cell, pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT3G09800.1); Has 621 Blast hits to 621 proteins in 219 species: Archae - 0; Bacteria - 0; Metazoa - 227; Fungi - 139; Plants - 149; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|38553 : 208.0) no description available & (gnl|cdd|35100 : 94.3) no description available & (reliability: 488.0) & (original description: Putative copz1, Description = Coatomer subunit zeta-1, PFAM = PF01217)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf09414_73919-78444' '(at1g01630 : 315.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G14820.3); Has 3015 Blast hits to 3010 proteins in 234 species: Archae - 0; Bacteria - 0; Metazoa - 1124; Fungi - 666; Plants - 866; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink). & (gnl|cdd|36683 : 216.0) no description available & (gnl|cdd|29115 : 124.0) no description available & (reliability: 630.0) & (original description: Putative glysoja_011978, Description = Random slug protein 5, PFAM = PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf09654_224430-227620' '(at5g37680 : 320.0) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARL GTPases.; ADP-ribosylation factor-like A1A (ARLA1A); FUNCTIONS IN: GTP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor-like A1D (TAIR:AT5G67560.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35298 : 283.0) no description available & (gnl|cdd|58042 : 272.0) no description available & (p49076|arf_maize : 110.0) ADP-ribosylation factor - Zea mays (Maize) & (reliability: 640.0) & (original description: Putative arf5, Description = ADP-ribosylation factor-like protein 8B, PFAM = PF00025)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf09895_28657-34846' '(at1g72160 : 375.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), GOLD (InterPro:IPR009038), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (TAIR:AT4G09160.1); Has 4473 Blast hits to 3903 proteins in 364 species: Archae - 35; Bacteria - 264; Metazoa - 1504; Fungi - 917; Plants - 883; Viruses - 13; Other Eukaryotes - 857 (source: NCBI BLink). & (gnl|cdd|36684 : 166.0) no description available & (gnl|cdd|29115 : 115.0) no description available & (reliability: 750.0) & (original description: Putative PATL2, Description = Patellin-2, PFAM = PF03765;PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf10015_974619-978556' '(at3g55150 : 583.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H1 (EXO70H1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, exocyst; EXPRESSED IN: sperm cell, root, pollen tube; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H2 (TAIR:AT2G39380.1); Has 814 Blast hits to 800 proteins in 89 species: Archae - 0; Bacteria - 0; Metazoa - 134; Fungi - 34; Plants - 631; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|86233 : 512.0) no description available & (gnl|cdd|37555 : 507.0) no description available & (reliability: 1160.0) & (original description: Putative EXO70H2, Description = Exocyst subunit exo70 family protein H2, PFAM = PF03081)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf10031_848373-855704' '(at1g10630 : 367.0) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.; ADP-ribosylation factor A1F (ARFA1F); FUNCTIONS IN: phospholipase activator activity, GTP binding, copper ion binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT2G47170.1); Has 15022 Blast hits to 15003 proteins in 509 species: Archae - 14; Bacteria - 51; Metazoa - 7710; Fungi - 1942; Plants - 2027; Viruses - 3; Other Eukaryotes - 3275 (source: NCBI BLink). & (o48920|arf_vigun : 364.0) ADP-ribosylation factor - Vigna unguiculata (Cowpea) & (gnl|cdd|47508 : 332.0) no description available & (gnl|cdd|35293 : 317.0) no description available & (reliability: 730.0) & (original description: Putative ARF1, Description = ADP-ribosylation factor 1, PFAM = PF00025)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf10095_283535-291959' '(at1g55690 : 654.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT5G56160.1); Has 2142 Blast hits to 2127 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 576; Fungi - 461; Plants - 793; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|36684 : 234.0) no description available & (gnl|cdd|47819 : 127.0) no description available & (reliability: 1308.0) & (original description: Putative SFH13, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH13, PFAM = PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf10440_32383-37890' '(gnl|cdd|58033 : 103.0) no description available & (gnl|cdd|35293 : 97.6) no description available & (at1g70490 : 96.3) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.; ARFA1D; FUNCTIONS IN: phospholipase activator activity, GTP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor 1 (TAIR:AT1G23490.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p51821|arf1_chlre : 96.3) ADP-ribosylation factor 1 - Chlamydomonas reinhardtii & (reliability: 192.6) & (original description: Putative arf1, Description = ADP-ribosylation factor 1, PFAM = PF00025)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf10675_20356-39057' '(at4g20410 : 353.0) Encodes a member of the gamma-soluble NSF attachment protein (gSNAP) gene family.; gamma-soluble NSF attachment protein (GSNAP); FUNCTIONS IN: transporter activity, binding; INVOLVED IN: intracellular protein transport; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NSF attachment protein (InterPro:IPR000744), Tetratricopeptide-like helical (InterPro:IPR011990); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36798 : 273.0) no description available & (reliability: 706.0) & (original description: Putative GSNAP, Description = Gamma-soluble NSF attachment protein, PFAM = PF14938)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf11291_24464-39491' '(at5g61970 : 803.0) signal recognition particle-related / SRP-related; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37671 : 265.0) no description available & (reliability: 1606.0) & (original description: Putative TIDP2760, Description = Signal recognition particle subunit SRP68, PFAM = PF16969)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf11337_8171-14956' '(q9m5p8|snaa_soltu : 409.0) Alpha-soluble NSF attachment protein (Alpha-SNAP) (N-ethylmaleimide-sensitive factor attachment protein, alpha) - Solanum tuberosum (Potato) & (at3g56190 : 345.0) Encodes one of two alpha-SNAPs (soluble NSF attachment protein) in Arabidopsis; alpha-soluble NSF attachment protein 2 (ALPHA-SNAP2); FUNCTIONS IN: soluble NSF attachment protein activity, binding; INVOLVED IN: intracellular protein transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: male gametophyte, cultured cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: NSF attachment protein (InterPro:IPR000744), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: alpha-soluble NSF attachment protein 1 (TAIR:AT3G56450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36799 : 316.0) no description available & (reliability: 690.0) & (original description: Putative Napa, Description = Alpha-soluble NSF attachment protein, PFAM = PF14938)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf13935_774-5287' '(at1g72160 : 511.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), GOLD (InterPro:IPR009038), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (TAIR:AT4G09160.1); Has 4473 Blast hits to 3903 proteins in 364 species: Archae - 35; Bacteria - 264; Metazoa - 1504; Fungi - 917; Plants - 883; Viruses - 13; Other Eukaryotes - 857 (source: NCBI BLink). & (gnl|cdd|36684 : 196.0) no description available & (gnl|cdd|29115 : 131.0) no description available & (reliability: 1022.0) & (original description: Putative PATL3, Description = Patellin-3, PFAM = PF00650;PF03765)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf14179_361959-366919' '(at4g09160 : 399.0) SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), GOLD (InterPro:IPR009038), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G72160.1); Has 12185 Blast hits to 8606 proteins in 820 species: Archae - 53; Bacteria - 1604; Metazoa - 4851; Fungi - 2300; Plants - 1007; Viruses - 130; Other Eukaryotes - 2240 (source: NCBI BLink). & (gnl|cdd|36684 : 177.0) no description available & (gnl|cdd|29115 : 115.0) no description available & (reliability: 798.0) & (original description: Putative PATL1, Description = Patellin 1, PFAM = PF03765;PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf14410_33525-38422' '(at1g72160 : 382.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), GOLD (InterPro:IPR009038), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (TAIR:AT4G09160.1); Has 4473 Blast hits to 3903 proteins in 364 species: Archae - 35; Bacteria - 264; Metazoa - 1504; Fungi - 917; Plants - 883; Viruses - 13; Other Eukaryotes - 857 (source: NCBI BLink). & (gnl|cdd|36684 : 179.0) no description available & (gnl|cdd|29115 : 118.0) no description available & (reliability: 764.0) & (original description: Putative PATL6, Description = Patellin-6, PFAM = PF03765;PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf15739_191559-196881' '(at2g21540 : 568.0) SEC14-like 3 (SFH3); FUNCTIONS IN: phosphatidylinositol transporter activity; INVOLVED IN: flower development, transport; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39180.1). & (gnl|cdd|36684 : 265.0) no description available & (gnl|cdd|84928 : 140.0) no description available & (reliability: 1136.0) & (original description: Putative SFH12, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH12, PFAM = PF03765;PF00650)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf18014_21844-33312' '(at3g17440 : 388.0) member of NPSN Gene Family; novel plant snare 13 (NPSN13); FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: novel plant snare 12 (TAIR:AT1G48240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 760.0) & (original description: Putative NPSN13, Description = Novel plant SNARE 13, PFAM = PF03908)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf20097_72256-80958' '(at2g21520 : 872.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36684 : 276.0) no description available & (gnl|cdd|84928 : 137.0) no description available & (reliability: 1676.0) & (original description: Putative SFH8, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH8, PFAM = PF00650;PF03765)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf20666_11513-16848' '(p51824|arf1_soltu : 89.7) ADP-ribosylation factor 1 - Solanum tuberosum (Potato) & (at3g62290 : 88.6) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.; ADP-ribosylation factor A1E (ARFA1E); CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), Ras small GTPase, Rab type (InterPro:IPR003579), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT2G47170.1). & (gnl|cdd|58033 : 85.7) no description available & (reliability: 177.2) & (original description: Putative arf1, Description = ADP-ribosylation factor 1, PFAM = PF00025)' T '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'niben101scf36738_26602-33393' '(at3g49870 : 344.0) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.; ADP-ribosylation factor-like A1C (ARLA1C); FUNCTIONS IN: GTP binding; LOCATED IN: nucleus, plasma membrane, vacuole, cytoplasm; EXPRESSED IN: male gametophyte, cultured cell, callus, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor-like A1D (TAIR:AT5G67560.1); Has 19452 Blast hits to 19446 proteins in 945 species: Archae - 22; Bacteria - 898; Metazoa - 8888; Fungi - 2713; Plants - 2635; Viruses - 3; Other Eukaryotes - 4293 (source: NCBI BLink). & (gnl|cdd|35298 : 301.0) no description available & (gnl|cdd|58042 : 282.0) no description available & (p49076|arf_maize : 110.0) ADP-ribosylation factor - Zea mays (Maize) & (reliability: 688.0) & (original description: Putative ARL8A, Description = ADP-ribosylation factor-like protein 8A, PFAM = PF00025)' T '29.3.5' 'protein.targeting.peroxisomes' 'nbv0.3scaffold55870_7025-13175' '(at5g56290 : 575.0) Encodes the peroxisomal targeting signal type 1 receptor that facilitates peroxisomal protein translocation. It recognizes proteins with the PTS1 consensus sequence (tripeptide SKL or a conserved variant) at the extreme C terminus. The protein has several domains, including C-terminal tetratricopeptide repeat motifs which act in binding the C-terminal "SKL" targeting signal. The mechanism of transport has been worked out in other organisms: The receptor recognizes and binds cytosolic PTS1-containing proteins. The PEX5-PTS1 complex binds a PEX14/PEX13 receptor complex at the peroxisome membrane and is translocated into the peroxisome matrix in a process dependent on PEX2,PEX10, and PEX12. In the peroxisome matrix, PEX5 releases its cargo and is recycled to the cytosol in a process dependent on PEX1, PEX4, PEX6 and PEX22. It is also involved, in conjunction with PEX7, in PTS1- and PTS2-dependent peroxisomal protein import. RNAi experiments suggest that PEX5 is necessary for the maintenance of both glyoxysomal and leaf peroxisomal functions.; peroxin 5 (PEX5); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36340 : 354.0) no description available & (reliability: 1150.0) & (original description: Putative PEX5, Description = Peroxisomal targeting signal receptor, PFAM = PF00515;PF13432;PF13432)' T '29.3.5' 'protein.targeting.peroxisomes' 'nbv0.3scaffold61347_1677-9949' '(at5g62810 : 235.0) mutant has a defect in the intracellular transport of thiolase from the cytosol to glyoxysomes (formerly known as ped2); peroxin 14 (PEX14); FUNCTIONS IN: protein transporter activity, protein binding; INVOLVED IN: peroxisome organization, protein targeting to peroxisome; LOCATED IN: cytosol, peroxisome, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peroxisome membrane anchor protein Pex14p, N-terminal (InterPro:IPR006785); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT5G62800.1); Has 366 Blast hits to 354 proteins in 137 species: Archae - 0; Bacteria - 2; Metazoa - 94; Fungi - 149; Plants - 89; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|37840 : 101.0) no description available & (reliability: 470.0) & (original description: Putative PEX14, Description = Peroxisome biogenesis factor 14, PFAM = PF04695)' T '29.3.5' 'protein.targeting.peroxisomes' 'nbv0.3scaffold90501_1-5361' '(at3g07560 : 158.0) Encodes peroxin 13 (PEX13) involved in protein transport into peroxisomes, for example, peroxisomal import of nitric oxide synthase.; peroxin 13 (PEX13); Has 58927 Blast hits to 16541 proteins in 1193 species: Archae - 47; Bacteria - 25769; Metazoa - 16443; Fungi - 3404; Plants - 6224; Viruses - 432; Other Eukaryotes - 6608 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative APM2, Description = AtPEX13, PFAM = )' T '29.3.5' 'protein.targeting.peroxisomes' 'nbv0.3scaffold95093_142-4679' '(at5g56290 : 308.0) Encodes the peroxisomal targeting signal type 1 receptor that facilitates peroxisomal protein translocation. It recognizes proteins with the PTS1 consensus sequence (tripeptide SKL or a conserved variant) at the extreme C terminus. The protein has several domains, including C-terminal tetratricopeptide repeat motifs which act in binding the C-terminal "SKL" targeting signal. The mechanism of transport has been worked out in other organisms: The receptor recognizes and binds cytosolic PTS1-containing proteins. The PEX5-PTS1 complex binds a PEX14/PEX13 receptor complex at the peroxisome membrane and is translocated into the peroxisome matrix in a process dependent on PEX2,PEX10, and PEX12. In the peroxisome matrix, PEX5 releases its cargo and is recycled to the cytosol in a process dependent on PEX1, PEX4, PEX6 and PEX22. It is also involved, in conjunction with PEX7, in PTS1- and PTS2-dependent peroxisomal protein import. RNAi experiments suggest that PEX5 is necessary for the maintenance of both glyoxysomal and leaf peroxisomal functions.; peroxin 5 (PEX5); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 616.0) & (original description: Putative PEX5, Description = Peroxisomal targeting signal 1 receptor, PFAM = )' T '29.3.5' 'protein.targeting.peroxisomes' 'nbv0.5scaffold1102_375804-419771' '(at5g43140 : 249.0) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, peroxisomal membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT4G33905.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37155 : 142.0) no description available & (reliability: 452.0) & (original description: Putative pco068646, Description = PXMP2/4 family protein 4, PFAM = PF04117)' T '29.3.5' 'protein.targeting.peroxisomes' 'nbv0.5scaffold3809_93010-98548' '(at4g14305 : 145.0) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT4G04470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37155 : 92.8) no description available & (reliability: 286.0) & (original description: Putative PMP22, Description = Peroxisomal membrane protein PMP22, PFAM = PF04117)' T '29.3.5' 'protein.targeting.peroxisomes' 'nbv0.5scaffold4455_109705-117968' '(at5g62810 : 238.0) mutant has a defect in the intracellular transport of thiolase from the cytosol to glyoxysomes (formerly known as ped2); peroxin 14 (PEX14); FUNCTIONS IN: protein transporter activity, protein binding; INVOLVED IN: peroxisome organization, protein targeting to peroxisome; LOCATED IN: cytosol, peroxisome, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peroxisome membrane anchor protein Pex14p, N-terminal (InterPro:IPR006785); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT5G62800.1); Has 366 Blast hits to 354 proteins in 137 species: Archae - 0; Bacteria - 2; Metazoa - 94; Fungi - 149; Plants - 89; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|37840 : 106.0) no description available & (reliability: 476.0) & (original description: Putative PED2, Description = Peroxisomal membrane protein PEX14, PFAM = PF04695)' T '29.3.5' 'protein.targeting.peroxisomes' 'nbv0.5scaffold7124_159-21485' '(at5g08470 : 1085.0) an AAA-ATPase that is the probable Arabidopsis orthologue of one of the AAA-ATPases involved in peroxisome biogenesis in yeasts and mammals.; peroxisome 1 (PEX1); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, binding, nucleotide binding, ATP binding; INVOLVED IN: protein import into peroxisome matrix, fatty acid beta-oxidation, response to stress; LOCATED IN: peroxisome; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Aspartate decarboxylase-like fold (InterPro:IPR009010), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peroxisome biogenesis factor 1, N-terminal (InterPro:IPR015342); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT3G53230.1); Has 45022 Blast hits to 26157 proteins in 3042 species: Archae - 1897; Bacteria - 15808; Metazoa - 7500; Fungi - 5597; Plants - 4311; Viruses - 29; Other Eukaryotes - 9880 (source: NCBI BLink). & (gnl|cdd|35954 : 562.0) no description available & (gnl|cdd|30812 : 253.0) no description available & (p54774|cdc48_soybn : 229.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 2170.0) & (original description: Putative PEX1, Description = Peroxisome biogenesis protein 1, PFAM = PF00004;PF00004;PF09262)' T '29.3.5' 'protein.targeting.peroxisomes' 'niben044scf00004229ctg001_7226-13086' '(at4g33905 : 255.0) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, peroxisomal membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT2G14860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37155 : 146.0) no description available & (reliability: 478.0) & (original description: Putative BnaC07g04760D, Description = BnaC07g04760D protein, PFAM = PF04117)' T '29.3.5' 'protein.targeting.peroxisomes' 'niben044scf00004890ctg008_1-5001' '(at4g14305 : 132.0) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT4G04470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37155 : 93.2) no description available & (reliability: 258.0) & (original description: Putative PMP22, Description = Peroxisomal membrane protein PMP22, PFAM = PF04117)' T '29.3.5' 'protein.targeting.peroxisomes' 'niben044scf00010434ctg005_1642-6243' '(at3g07560 : 137.0) Encodes peroxin 13 (PEX13) involved in protein transport into peroxisomes, for example, peroxisomal import of nitric oxide synthase.; peroxin 13 (PEX13); Has 58927 Blast hits to 16541 proteins in 1193 species: Archae - 47; Bacteria - 25769; Metazoa - 16443; Fungi - 3404; Plants - 6224; Viruses - 432; Other Eukaryotes - 6608 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative APM2, Description = AtPEX13, PFAM = )' T '29.3.5' 'protein.targeting.peroxisomes' 'niben044scf00011364ctg001_731-10412' '(at5g62810 : 274.0) mutant has a defect in the intracellular transport of thiolase from the cytosol to glyoxysomes (formerly known as ped2); peroxin 14 (PEX14); FUNCTIONS IN: protein transporter activity, protein binding; INVOLVED IN: peroxisome organization, protein targeting to peroxisome; LOCATED IN: cytosol, peroxisome, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peroxisome membrane anchor protein Pex14p, N-terminal (InterPro:IPR006785); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT5G62800.1); Has 366 Blast hits to 354 proteins in 137 species: Archae - 0; Bacteria - 2; Metazoa - 94; Fungi - 149; Plants - 89; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|37840 : 100.0) no description available & (reliability: 548.0) & (original description: Putative PEX14, Description = Peroxisomal membrane protein PEX14, PFAM = PF04695)' T '29.3.5' 'protein.targeting.peroxisomes' 'niben044scf00013770ctg008_5599-12693' '(at5g62810 : 254.0) mutant has a defect in the intracellular transport of thiolase from the cytosol to glyoxysomes (formerly known as ped2); peroxin 14 (PEX14); FUNCTIONS IN: protein transporter activity, protein binding; INVOLVED IN: peroxisome organization, protein targeting to peroxisome; LOCATED IN: cytosol, peroxisome, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peroxisome membrane anchor protein Pex14p, N-terminal (InterPro:IPR006785); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT5G62800.1); Has 366 Blast hits to 354 proteins in 137 species: Archae - 0; Bacteria - 2; Metazoa - 94; Fungi - 149; Plants - 89; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|37840 : 99.3) no description available & (reliability: 508.0) & (original description: Putative PEX14, Description = Peroxisomal membrane protein PEX14, PFAM = PF04695)' T '29.3.5' 'protein.targeting.peroxisomes' 'niben101scf00662_221312-228737' '(at5g43140 : 246.0) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, peroxisomal membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT4G33905.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37155 : 138.0) no description available & (reliability: 462.0) & (original description: Putative pco068646, Description = PXMP2/4 family protein 4, PFAM = PF04117)' T '29.3.5' 'protein.targeting.peroxisomes' 'niben101scf00961_532211-558293' '(at3g24570 : 318.0) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, integral to membrane, peroxisomal membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT5G43140.1). & (gnl|cdd|37155 : 131.0) no description available & (reliability: 636.0) & (original description: Putative PGSC0003DMG400018567, Description = MpV17 transgene-like, PFAM = PF04117)' T '29.3.5' 'protein.targeting.peroxisomes' 'niben101scf01658_292882-302601' '(at3g24570 : 318.0) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, integral to membrane, peroxisomal membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT5G43140.1). & (gnl|cdd|37155 : 132.0) no description available & (reliability: 636.0) & (original description: Putative BnaA03g37470D, Description = BnaA03g37470D protein, PFAM = PF04117)' T '29.3.5' 'protein.targeting.peroxisomes' 'niben101scf01764_355726-364929' '(at5g62810 : 238.0) mutant has a defect in the intracellular transport of thiolase from the cytosol to glyoxysomes (formerly known as ped2); peroxin 14 (PEX14); FUNCTIONS IN: protein transporter activity, protein binding; INVOLVED IN: peroxisome organization, protein targeting to peroxisome; LOCATED IN: cytosol, peroxisome, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peroxisome membrane anchor protein Pex14p, N-terminal (InterPro:IPR006785); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT5G62800.1); Has 366 Blast hits to 354 proteins in 137 species: Archae - 0; Bacteria - 2; Metazoa - 94; Fungi - 149; Plants - 89; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|37840 : 107.0) no description available & (reliability: 476.0) & (original description: Putative PED2, Description = Peroxisomal membrane protein PEX14, PFAM = PF04695)' T '29.3.5' 'protein.targeting.peroxisomes' 'niben101scf02145_1128772-1134552' '(at4g14305 : 192.0) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT4G04470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37155 : 114.0) no description available & (reliability: 370.0) & (original description: Putative PMP22, Description = Peroxisomal membrane protein PMP22, PFAM = PF04117)' T '29.3.5' 'protein.targeting.peroxisomes' 'niben101scf02237_989844-1012807' '(at5g62810 : 258.0) mutant has a defect in the intracellular transport of thiolase from the cytosol to glyoxysomes (formerly known as ped2); peroxin 14 (PEX14); FUNCTIONS IN: protein transporter activity, protein binding; INVOLVED IN: peroxisome organization, protein targeting to peroxisome; LOCATED IN: cytosol, peroxisome, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peroxisome membrane anchor protein Pex14p, N-terminal (InterPro:IPR006785); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT5G62800.1); Has 366 Blast hits to 354 proteins in 137 species: Archae - 0; Bacteria - 2; Metazoa - 94; Fungi - 149; Plants - 89; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|37840 : 103.0) no description available & (reliability: 516.0) & (original description: Putative PED2, Description = Peroxisomal membrane protein PEX14, PFAM = PF04695)' T '29.3.5' 'protein.targeting.peroxisomes' 'niben101scf03077_420782-426380' '(at5g43140 : 252.0) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, peroxisomal membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT4G33905.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37155 : 143.0) no description available & (reliability: 468.0) & (original description: Putative pco068646, Description = PXMP2/4 family protein 4, PFAM = PF04117)' T '29.3.5' 'protein.targeting.peroxisomes' 'niben101scf03179_40298-43549' '(at4g33905 : 238.0) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, peroxisomal membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT2G14860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37155 : 157.0) no description available & (reliability: 456.0) & (original description: Putative BnaC07g04760D, Description = BnaC07g04760D protein, PFAM = PF04117)' T '29.3.5' 'protein.targeting.peroxisomes' 'niben101scf03733_44948-57392' '(at5g56290 : 945.0) Encodes the peroxisomal targeting signal type 1 receptor that facilitates peroxisomal protein translocation. It recognizes proteins with the PTS1 consensus sequence (tripeptide SKL or a conserved variant) at the extreme C terminus. The protein has several domains, including C-terminal tetratricopeptide repeat motifs which act in binding the C-terminal "SKL" targeting signal. The mechanism of transport has been worked out in other organisms: The receptor recognizes and binds cytosolic PTS1-containing proteins. The PEX5-PTS1 complex binds a PEX14/PEX13 receptor complex at the peroxisome membrane and is translocated into the peroxisome matrix in a process dependent on PEX2,PEX10, and PEX12. In the peroxisome matrix, PEX5 releases its cargo and is recycled to the cytosol in a process dependent on PEX1, PEX4, PEX6 and PEX22. It is also involved, in conjunction with PEX7, in PTS1- and PTS2-dependent peroxisomal protein import. RNAi experiments suggest that PEX5 is necessary for the maintenance of both glyoxysomal and leaf peroxisomal functions.; peroxin 5 (PEX5); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36340 : 372.0) no description available & (reliability: 1890.0) & (original description: Putative PEX5, Description = Peroxisome biogenesis protein 5, PFAM = PF00515;PF13432;PF13432)' T '29.3.5' 'protein.targeting.peroxisomes' 'niben101scf03945_24440-27913' '(at1g01820 : 388.0) member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation.; peroxin 11c (PEX11C); CONTAINS InterPro DOMAIN/s: Peroxisomal biogenesis factor 11 (InterPro:IPR008733); BEST Arabidopsis thaliana protein match is: peroxin 11D (TAIR:AT2G45740.3); Has 289 Blast hits to 289 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 41; Plants - 179; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|39388 : 218.0) no description available & (gnl|cdd|86907 : 175.0) no description available & (reliability: 774.0) & (original description: Putative PEX11D, Description = Peroxisomal membrane protein 11D, PFAM = PF05648)' T '29.3.5' 'protein.targeting.peroxisomes' 'niben101scf04021_745029-810084' '(at1g01820 : 373.0) member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation.; peroxin 11c (PEX11C); CONTAINS InterPro DOMAIN/s: Peroxisomal biogenesis factor 11 (InterPro:IPR008733); BEST Arabidopsis thaliana protein match is: peroxin 11D (TAIR:AT2G45740.3); Has 289 Blast hits to 289 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 41; Plants - 179; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|39388 : 216.0) no description available & (gnl|cdd|86907 : 171.0) no description available & (reliability: 702.0) & (original description: Putative PEX11C, Description = Peroxisomal membrane protein 11C, PFAM = PF05648)' T '29.3.5' 'protein.targeting.peroxisomes' 'niben101scf04387_249353-255425' '(at3g07560 : 155.0) Encodes peroxin 13 (PEX13) involved in protein transport into peroxisomes, for example, peroxisomal import of nitric oxide synthase.; peroxin 13 (PEX13); Has 58927 Blast hits to 16541 proteins in 1193 species: Archae - 47; Bacteria - 25769; Metazoa - 16443; Fungi - 3404; Plants - 6224; Viruses - 432; Other Eukaryotes - 6608 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative APM2, Description = AtPEX13, PFAM = )' T '29.3.5' 'protein.targeting.peroxisomes' 'niben101scf04436_1434623-1440808' '(at3g07560 : 142.0) Encodes peroxin 13 (PEX13) involved in protein transport into peroxisomes, for example, peroxisomal import of nitric oxide synthase.; peroxin 13 (PEX13); Has 58927 Blast hits to 16541 proteins in 1193 species: Archae - 47; Bacteria - 25769; Metazoa - 16443; Fungi - 3404; Plants - 6224; Viruses - 432; Other Eukaryotes - 6608 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative APM2, Description = AtPEX13, PFAM = )' T '29.3.5' 'protein.targeting.peroxisomes' 'niben101scf04439_72445-94127' '(at5g08470 : 1108.0) an AAA-ATPase that is the probable Arabidopsis orthologue of one of the AAA-ATPases involved in peroxisome biogenesis in yeasts and mammals.; peroxisome 1 (PEX1); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, binding, nucleotide binding, ATP binding; INVOLVED IN: protein import into peroxisome matrix, fatty acid beta-oxidation, response to stress; LOCATED IN: peroxisome; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Aspartate decarboxylase-like fold (InterPro:IPR009010), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peroxisome biogenesis factor 1, N-terminal (InterPro:IPR015342); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT3G53230.1); Has 45022 Blast hits to 26157 proteins in 3042 species: Archae - 1897; Bacteria - 15808; Metazoa - 7500; Fungi - 5597; Plants - 4311; Viruses - 29; Other Eukaryotes - 9880 (source: NCBI BLink). & (gnl|cdd|35954 : 586.0) no description available & (gnl|cdd|30812 : 270.0) no description available & (p54774|cdc48_soybn : 242.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 2216.0) & (original description: Putative PEX1, Description = Peroxisome biogenesis protein 1, PFAM = PF00004;PF00004;PF09262)' T '29.3.5' 'protein.targeting.peroxisomes' 'niben101scf05438_544737-550122' '(at4g14305 : 208.0) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT4G04470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37155 : 111.0) no description available & (reliability: 394.0) & (original description: Putative PMP22, Description = Peroxisomal membrane protein PMP22, PFAM = PF04117)' T '29.3.5' 'protein.targeting.peroxisomes' 'niben101scf05474_42787-50592' '(at4g14305 : 179.0) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT4G04470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37155 : 108.0) no description available & (reliability: 342.0) & (original description: Putative PMP22, Description = Peroxisomal membrane protein PMP22, PFAM = PF04117)' T '29.3.5' 'protein.targeting.peroxisomes' 'niben101scf05484_168198-171008' '(at1g29260 : 549.0) Encodes the peroxisomal targeting signal type 2 receptor that facilitates peroxisomal protein translocation. It recognizes proteins with the PTS2 consensus sequence (RLX5HL or a variant) within the first 30 or so amino acids. RNAi experiments suggest that PEX7 is necessary for the maintenance of glyoxysomal but not leaf peroxisomal function.; peroxin 7 (PEX7); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT4G35050.1); Has 47872 Blast hits to 26073 proteins in 704 species: Archae - 44; Bacteria - 5081; Metazoa - 19312; Fungi - 11304; Plants - 6238; Viruses - 0; Other Eukaryotes - 5893 (source: NCBI BLink). & (gnl|cdd|35498 : 445.0) no description available & (gnl|cdd|29257 : 141.0) no description available & (reliability: 1098.0) & (original description: Putative PEX7, Description = Peroxisome biogenesis protein 7, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '29.3.5' 'protein.targeting.peroxisomes' 'niben101scf05749_219680-225183' '(at4g33905 : 236.0) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, peroxisomal membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT2G14860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37155 : 137.0) no description available & (reliability: 440.0) & (original description: Putative pco068646, Description = PXMP2/4 family protein 4, PFAM = PF04117)' T '29.3.5' 'protein.targeting.peroxisomes' 'niben101scf08753_176631-208912' '(at5g08470 : 939.0) an AAA-ATPase that is the probable Arabidopsis orthologue of one of the AAA-ATPases involved in peroxisome biogenesis in yeasts and mammals.; peroxisome 1 (PEX1); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, binding, nucleotide binding, ATP binding; INVOLVED IN: protein import into peroxisome matrix, fatty acid beta-oxidation, response to stress; LOCATED IN: peroxisome; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Aspartate decarboxylase-like fold (InterPro:IPR009010), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peroxisome biogenesis factor 1, N-terminal (InterPro:IPR015342); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT3G53230.1); Has 45022 Blast hits to 26157 proteins in 3042 species: Archae - 1897; Bacteria - 15808; Metazoa - 7500; Fungi - 5597; Plants - 4311; Viruses - 29; Other Eukaryotes - 9880 (source: NCBI BLink). & (gnl|cdd|35954 : 439.0) no description available & (gnl|cdd|30812 : 200.0) no description available & (p54774|cdc48_soybn : 173.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 1878.0) & (original description: Putative PEX1, Description = Peroxisome biogenesis protein 1, PFAM = PF09262;PF00004;PF00004)' T '29.3.5' 'protein.targeting.peroxisomes' 'niben101scf08753_203352-207834' '(at5g08470 : 209.0) an AAA-ATPase that is the probable Arabidopsis orthologue of one of the AAA-ATPases involved in peroxisome biogenesis in yeasts and mammals.; peroxisome 1 (PEX1); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, binding, nucleotide binding, ATP binding; INVOLVED IN: protein import into peroxisome matrix, fatty acid beta-oxidation, response to stress; LOCATED IN: peroxisome; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Aspartate decarboxylase-like fold (InterPro:IPR009010), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peroxisome biogenesis factor 1, N-terminal (InterPro:IPR015342); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT3G53230.1); Has 45022 Blast hits to 26157 proteins in 3042 species: Archae - 1897; Bacteria - 15808; Metazoa - 7500; Fungi - 5597; Plants - 4311; Viruses - 29; Other Eukaryotes - 9880 (source: NCBI BLink). & (gnl|cdd|35954 : 169.0) no description available & (gnl|cdd|30812 : 95.6) no description available & (p54774|cdc48_soybn : 89.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 418.0) & (original description: Putative pex1, Description = Peroxisome biogenesis factor 1, PFAM = PF00004)' T '29.3.5' 'protein.targeting.peroxisomes' 'niben101scf10366_63760-75439' '(at5g62810 : 255.0) mutant has a defect in the intracellular transport of thiolase from the cytosol to glyoxysomes (formerly known as ped2); peroxin 14 (PEX14); FUNCTIONS IN: protein transporter activity, protein binding; INVOLVED IN: peroxisome organization, protein targeting to peroxisome; LOCATED IN: cytosol, peroxisome, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peroxisome membrane anchor protein Pex14p, N-terminal (InterPro:IPR006785); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT5G62800.1); Has 366 Blast hits to 354 proteins in 137 species: Archae - 0; Bacteria - 2; Metazoa - 94; Fungi - 149; Plants - 89; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|37840 : 95.9) no description available & (reliability: 510.0) & (original description: Putative PEX14, Description = Peroxisomal membrane protein PEX14, PFAM = PF04695)' T '29.3.5' 'protein.targeting.peroxisomes' 'niben101scf12497_21369-42130' '(at4g14305 : 177.0) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT4G04470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37155 : 109.0) no description available & (reliability: 338.0) & (original description: Putative PMP22, Description = Peroxisomal membrane protein PMP22, PFAM = PF04117)' T '29.3.5' 'protein.targeting.peroxisomes' 'niben101scf22677_6078-9598' '(at5g43140 : 249.0) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, peroxisomal membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT4G33905.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37155 : 142.0) no description available & (reliability: 452.0) & (original description: Putative pco068646, Description = PXMP2/4 family protein 4, PFAM = PF04117)' T '29.3.5' 'protein.targeting.peroxisomes' 'niben101scf28259_62318-65799' '(at1g01820 : 389.0) member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation.; peroxin 11c (PEX11C); CONTAINS InterPro DOMAIN/s: Peroxisomal biogenesis factor 11 (InterPro:IPR008733); BEST Arabidopsis thaliana protein match is: peroxin 11D (TAIR:AT2G45740.3); Has 289 Blast hits to 289 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 41; Plants - 179; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|39388 : 216.0) no description available & (gnl|cdd|86907 : 175.0) no description available & (reliability: 774.0) & (original description: Putative PEX11C, Description = Peroxisomal membrane protein 11C, PFAM = PF05648)' T '29.3.99' 'protein.targeting.unknown' 'nbv0.3scaffold19149_100-8152' '(at3g55960 : 210.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G29780.1); Has 2169 Blast hits to 2162 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 723; Fungi - 425; Plants - 384; Viruses - 0; Other Eukaryotes - 637 (source: NCBI BLink). & (gnl|cdd|47876 : 91.5) no description available & (gnl|cdd|36818 : 85.4) no description available & (reliability: 420.0) & (original description: Putative PGSC0003DMG400027123, Description = CTD small phosphatase-like protein 2, PFAM = PF03031)' T '29.3.99' 'protein.targeting.unknown' 'nbv0.3scaffold56265_2902-9107' '(at5g51220 : 271.0) ubiquinol-cytochrome C chaperone family protein; CONTAINS InterPro DOMAIN/s: Ubiquinol-cytochrome c chaperone, CBP3 (InterPro:IPR007129), Ubiquinol-cytochrome c chaperone/UPF0174 (InterPro:IPR021150); Has 535 Blast hits to 535 proteins in 209 species: Archae - 0; Bacteria - 206; Metazoa - 176; Fungi - 54; Plants - 41; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|38084 : 150.0) no description available & (reliability: 542.0) & (original description: Putative PHYPADRAFT_113937, Description = Predicted protein, PFAM = PF03981)' T '29.3.99' 'protein.targeting.unknown' 'nbv0.5scaffold2223_140445-150325' '(gnl|cdd|69545 : 367.0) no description available & (gnl|cdd|37977 : 364.0) no description available & (at3g59310 : 357.0) Eukaryotic protein of unknown function (DUF914); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF914, eukaryotic (InterPro:IPR009262); BEST Arabidopsis thaliana protein match is: Eukaryotic protein of unknown function (DUF914) (TAIR:AT3G59340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 714.0) & (original description: Putative Anm1, Description = Anthocyanin-related membrane protein 1, PFAM = PF06027;PF06027)' T '29.3.99' 'protein.targeting.unknown' 'nbv0.5scaffold8226_36328-45991' '(at3g55960 : 305.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G29780.1); Has 2169 Blast hits to 2162 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 723; Fungi - 425; Plants - 384; Viruses - 0; Other Eukaryotes - 637 (source: NCBI BLink). & (gnl|cdd|36818 : 164.0) no description available & (gnl|cdd|47876 : 137.0) no description available & (reliability: 610.0) & (original description: Putative At3g55960, Description = CTD small phosphatase-like protein 2, PFAM = PF03031)' T '29.3.99' 'protein.targeting.unknown' 'niben044scf00006743ctg010_11040-21288' '(at3g55960 : 328.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G29780.1); Has 2169 Blast hits to 2162 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 723; Fungi - 425; Plants - 384; Viruses - 0; Other Eukaryotes - 637 (source: NCBI BLink). & (gnl|cdd|36818 : 164.0) no description available & (gnl|cdd|47876 : 136.0) no description available & (reliability: 656.0) & (original description: Putative BnaC06g15690D, Description = BnaC06g15690D protein, PFAM = PF03031)' T '29.3.99' 'protein.targeting.unknown' 'niben044scf00007134ctg003_2567-12572' '(gnl|cdd|69545 : 369.0) no description available & (gnl|cdd|37977 : 359.0) no description available & (at3g59310 : 355.0) Eukaryotic protein of unknown function (DUF914); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF914, eukaryotic (InterPro:IPR009262); BEST Arabidopsis thaliana protein match is: Eukaryotic protein of unknown function (DUF914) (TAIR:AT3G59340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 710.0) & (original description: Putative Anm1, Description = Anthocyanin-related membrane protein 1, PFAM = PF06027;PF06027)' T '29.3.99' 'protein.targeting.unknown' 'niben044scf00008742ctg007_1224-4278' '(at3g55960 : 145.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G29780.1); Has 2169 Blast hits to 2162 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 723; Fungi - 425; Plants - 384; Viruses - 0; Other Eukaryotes - 637 (source: NCBI BLink). & (gnl|cdd|36818 : 83.1) no description available & (reliability: 290.0) & (original description: Putative At3g55960, Description = CTD small phosphatase-like protein 2, PFAM = PF03031)' T '29.3.99' 'protein.targeting.unknown' 'niben044scf00021011ctg006_23968-34565' '(at4g12060 : 219.0) Double Clp-N motif protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein metabolic process; LOCATED IN: plastid stroma, chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Double Clp-N motif protein (TAIR:AT4G25370.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative Os03g0247000, Description = Clp amino terminal domain containing protein, expressed, PFAM = PF02861;PF02861)' T '29.3.99' 'protein.targeting.unknown' 'niben044scf00042416ctg003_9467-17984' '(at4g25370 : 236.0) Double Clp-N motif protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein metabolic process; LOCATED IN: thylakoid, plastid stroma, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Double Clp-N motif protein (TAIR:AT4G12060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative CLPT1, Description = ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic, PFAM = PF02861;PF02861)' T '29.3.99' 'protein.targeting.unknown' 'niben101scf00318_432106-435396' '(at3g55960 : 146.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G29780.1); Has 2169 Blast hits to 2162 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 723; Fungi - 425; Plants - 384; Viruses - 0; Other Eukaryotes - 637 (source: NCBI BLink). & (gnl|cdd|36818 : 83.9) no description available & (reliability: 292.0) & (original description: Putative At3g55960, Description = CTD small phosphatase-like protein 2, PFAM = PF03031)' T '29.3.99' 'protein.targeting.unknown' 'niben101scf00318_435629-447223' '(at3g55960 : 235.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G29780.1); Has 2169 Blast hits to 2162 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 723; Fungi - 425; Plants - 384; Viruses - 0; Other Eukaryotes - 637 (source: NCBI BLink). & (gnl|cdd|47876 : 89.5) no description available & (gnl|cdd|36818 : 84.7) no description available & (reliability: 470.0) & (original description: Putative At3g55960, Description = CTD small phosphatase-like protein 2, PFAM = PF03031)' T '29.3.99' 'protein.targeting.unknown' 'niben101scf00332_1287666-1294552' '(at5g02280 : 271.0) SNARE-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, ER to Golgi vesicle-mediated transport; LOCATED IN: cis-Golgi network; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sybindin-like protein (InterPro:IPR007233), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT1G51160.2); Has 567 Blast hits to 560 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 227; Fungi - 139; Plants - 109; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (gnl|cdd|67705 : 183.0) no description available & (gnl|cdd|38579 : 174.0) no description available & (reliability: 542.0) & (original description: Putative trappc4, Description = Trafficking protein particle complex subunit 4, PFAM = PF04099)' T '29.3.99' 'protein.targeting.unknown' 'niben101scf01020_234094-236369' '(at4g40042 : 117.0) Microsomal signal peptidase 12 kDa subunit (SPC12); FUNCTIONS IN: peptidase activity; INVOLVED IN: signal peptide processing; LOCATED IN: endomembrane system, integral to membrane, signal peptidase complex; CONTAINS InterPro DOMAIN/s: Microsomal signal peptidase 12kDa subunit (InterPro:IPR009542); BEST Arabidopsis thaliana protein match is: Microsomal signal peptidase 12 kDa subunit (SPC12) (TAIR:AT2G22425.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|70129 : 95.7) no description available & (reliability: 234.0) & (original description: Putative At2g22425, Description = Probable signal peptidase complex subunit 1, PFAM = PF06645)' T '29.3.99' 'protein.targeting.unknown' 'niben101scf01842_11981-19181' '(gnl|cdd|69545 : 296.0) no description available & (gnl|cdd|37977 : 277.0) no description available & (at3g59310 : 237.0) Eukaryotic protein of unknown function (DUF914); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF914, eukaryotic (InterPro:IPR009262); BEST Arabidopsis thaliana protein match is: Eukaryotic protein of unknown function (DUF914) (TAIR:AT3G59340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 474.0) & (original description: Putative Anm1, Description = Anthocyanin-related membrane protein 1, PFAM = PF06027)' T '29.3.99' 'protein.targeting.unknown' 'niben101scf02221_461939-484609' '(at3g55960 : 346.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G29780.1); Has 2169 Blast hits to 2162 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 723; Fungi - 425; Plants - 384; Viruses - 0; Other Eukaryotes - 637 (source: NCBI BLink). & (gnl|cdd|36818 : 159.0) no description available & (gnl|cdd|47876 : 137.0) no description available & (reliability: 692.0) & (original description: Putative Os01g0833100, Description = NLI interacting factor (NIF) family protein-like, PFAM = PF03031)' T '29.3.99' 'protein.targeting.unknown' 'niben101scf02286_222077-228827' '(at3g55960 : 224.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G29780.1); Has 2169 Blast hits to 2162 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 723; Fungi - 425; Plants - 384; Viruses - 0; Other Eukaryotes - 637 (source: NCBI BLink). & (gnl|cdd|47876 : 98.0) no description available & (gnl|cdd|36818 : 93.5) no description available & (reliability: 448.0) & (original description: Putative At3g55960, Description = CTD small phosphatase-like protein 2, PFAM = PF03031)' T '29.3.99' 'protein.targeting.unknown' 'niben101scf02652_177164-187891' '(at4g12060 : 230.0) Double Clp-N motif protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein metabolic process; LOCATED IN: plastid stroma, chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Double Clp-N motif protein (TAIR:AT4G25370.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative CLPS1, Description = Clp protease-related protein, PFAM = PF02861;PF02861)' T '29.3.99' 'protein.targeting.unknown' 'niben101scf03907_22806-31290' '(at4g25370 : 235.0) Double Clp-N motif protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein metabolic process; LOCATED IN: thylakoid, plastid stroma, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Double Clp-N motif protein (TAIR:AT4G12060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 470.0) & (original description: Putative CLPT1, Description = ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic, PFAM = PF02861;PF02861)' T '29.3.99' 'protein.targeting.unknown' 'niben101scf05211_134149-142068' '(at4g12060 : 229.0) Double Clp-N motif protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein metabolic process; LOCATED IN: plastid stroma, chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Double Clp-N motif protein (TAIR:AT4G25370.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative CLPS1, Description = Clp protease-related protein, PFAM = PF02861;PF02861)' T '29.3.99' 'protein.targeting.unknown' 'niben101scf05346_686591-688866' '(at2g22425 : 123.0) Microsomal signal peptidase 12 kDa subunit (SPC12); FUNCTIONS IN: peptidase activity; INVOLVED IN: signal peptide processing; LOCATED IN: endomembrane system, integral to membrane, signal peptidase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Microsomal signal peptidase 12kDa subunit (InterPro:IPR009542); BEST Arabidopsis thaliana protein match is: Microsomal signal peptidase 12 kDa subunit (SPC12) (TAIR:AT4G40042.1); Has 315 Blast hits to 315 proteins in 147 species: Archae - 0; Bacteria - 0; Metazoa - 142; Fungi - 81; Plants - 67; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|70129 : 91.1) no description available & (reliability: 242.0) & (original description: Putative At2g22425, Description = Probable signal peptidase complex subunit 1, PFAM = PF06645)' T '29.3.99' 'protein.targeting.unknown' 'niben101scf05621_225606-228626' '(at4g40042 : 120.0) Microsomal signal peptidase 12 kDa subunit (SPC12); FUNCTIONS IN: peptidase activity; INVOLVED IN: signal peptide processing; LOCATED IN: endomembrane system, integral to membrane, signal peptidase complex; CONTAINS InterPro DOMAIN/s: Microsomal signal peptidase 12kDa subunit (InterPro:IPR009542); BEST Arabidopsis thaliana protein match is: Microsomal signal peptidase 12 kDa subunit (SPC12) (TAIR:AT2G22425.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|70129 : 91.9) no description available & (reliability: 240.0) & (original description: Putative At2g22425, Description = Probable signal peptidase complex subunit 1, PFAM = PF06645)' T '29.3.99' 'protein.targeting.unknown' 'niben101scf07937_189397-201517' '(gnl|cdd|69545 : 416.0) no description available & (gnl|cdd|37977 : 404.0) no description available & (at3g59310 : 397.0) Eukaryotic protein of unknown function (DUF914); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF914, eukaryotic (InterPro:IPR009262); BEST Arabidopsis thaliana protein match is: Eukaryotic protein of unknown function (DUF914) (TAIR:AT3G59340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 794.0) & (original description: Putative Anm1, Description = Anthocyanin-related membrane protein 1, PFAM = PF06027)' T '29.3.99' 'protein.targeting.unknown' 'niben101scf08088_337413-339688' '(at4g40042 : 117.0) Microsomal signal peptidase 12 kDa subunit (SPC12); FUNCTIONS IN: peptidase activity; INVOLVED IN: signal peptide processing; LOCATED IN: endomembrane system, integral to membrane, signal peptidase complex; CONTAINS InterPro DOMAIN/s: Microsomal signal peptidase 12kDa subunit (InterPro:IPR009542); BEST Arabidopsis thaliana protein match is: Microsomal signal peptidase 12 kDa subunit (SPC12) (TAIR:AT2G22425.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|70129 : 98.0) no description available & (reliability: 234.0) & (original description: Putative BnaC08g35120D, Description = BnaC08g35120D protein, PFAM = PF06645)' T '29.3.99' 'protein.targeting.unknown' 'niben101scf08249_354690-374580' '(at5g51220 : 366.0) ubiquinol-cytochrome C chaperone family protein; CONTAINS InterPro DOMAIN/s: Ubiquinol-cytochrome c chaperone, CBP3 (InterPro:IPR007129), Ubiquinol-cytochrome c chaperone/UPF0174 (InterPro:IPR021150); Has 535 Blast hits to 535 proteins in 209 species: Archae - 0; Bacteria - 206; Metazoa - 176; Fungi - 54; Plants - 41; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|38084 : 180.0) no description available & (reliability: 732.0) & (original description: Putative At5g51220, Description = At5g51220, PFAM = PF03981)' T '29.3.99' 'protein.targeting.unknown' 'niben101scf08293_58195-66497' '(at5g51220 : 375.0) ubiquinol-cytochrome C chaperone family protein; CONTAINS InterPro DOMAIN/s: Ubiquinol-cytochrome c chaperone, CBP3 (InterPro:IPR007129), Ubiquinol-cytochrome c chaperone/UPF0174 (InterPro:IPR021150); Has 535 Blast hits to 535 proteins in 209 species: Archae - 0; Bacteria - 206; Metazoa - 176; Fungi - 54; Plants - 41; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|38084 : 194.0) no description available & (reliability: 750.0) & (original description: Putative At5g51220, Description = At5g51220, PFAM = PF03981)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold279_40642-72010' '(at2g35350 : 720.0) Encodes a protein most similar to the POLTERGEIST locus. Double mutant analysis of loss of function alleles indicate PLL1 functions redundantly with POL to regulate meristem size and pedicel length. Acts in a dose dependent manner with POL to suppress the clv1, clv2 and clv3 phenotypes.; poltergeist like 1 (PLL1); FUNCTIONS IN: phospholipid binding, protein serine/threonine phosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G46920.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35919 : 295.0) no description available & (gnl|cdd|29062 : 131.0) no description available & (reliability: 1440.0) & (original description: Putative PLL1, Description = Protein phosphatase 2C 29, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold723_1-3184' '(gnl|cdd|35830 : 519.0) no description available & (at3g44610 : 468.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 2 (TAIR:AT5G47750.1); Has 99456 Blast hits to 74546 proteins in 2417 species: Archae - 35; Bacteria - 11117; Metazoa - 41933; Fungi - 12113; Plants - 14694; Viruses - 280; Other Eukaryotes - 19284 (source: NCBI BLink). & (p47997|g11a_orysa : 424.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 146.0) no description available & (reliability: 936.0) & (original description: Putative At3g44610, Description = At3g44610, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold1237_14012-23477' '(at5g14720 : 845.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G79640.1); Has 122716 Blast hits to 120970 proteins in 3289 species: Archae - 117; Bacteria - 14305; Metazoa - 44836; Fungi - 12007; Plants - 31268; Viruses - 500; Other Eukaryotes - 19683 (source: NCBI BLink). & (gnl|cdd|35802 : 535.0) no description available & (gnl|cdd|29142 : 251.0) no description available & (q5qn75|m2k1_orysa : 135.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1690.0) & (original description: Putative MAP4K4, Description = MAP kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold1316_1-5628' '(at4g31170 : 651.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G24360.1). & (gnl|cdd|35413 : 320.0) no description available & (gnl|cdd|47549 : 242.0) no description available & (q6x4a2|cipk1_orysa : 116.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1302.0) & (original description: Putative DPK1, Description = Os08g0224100 protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold2048_69882-78728' '(gnl|cdd|85563 : 685.0) no description available & (gnl|cdd|37296 : 645.0) no description available & (at5g03470 : 640.0) Encodes B' regulatory subunit of PP2A (AtB'alpha), putative size of 57 kDa.; ATB' ALPHA; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT3G09880.1); Has 1194 Blast hits to 1162 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 571; Fungi - 171; Plants - 302; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 1280.0) & (original description: Putative B'ALPHA, Description = Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' alpha isoform, PFAM = PF01603)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold2108_20768-27482' '(q75lr7|sapk1_orysa : 442.0) Serine/threonine-protein kinase SAPK1 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 1) - Oryza sativa (Rice) & (at4g33950 : 406.0) Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network.; OPEN STOMATA 1 (OST1); FUNCTIONS IN: calcium-dependent protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 (TAIR:AT5G66880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35803 : 258.0) no description available & (gnl|cdd|29142 : 230.0) no description available & (reliability: 812.0) & (original description: Putative pk5, Description = Serine/threonine-protein kinase SAPK7, PFAM = PF07714;PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold2188_54513-61387' '(at2g17890 : 781.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 16 (CPK16); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 18 (TAIR:AT4G36070.1); Has 126765 Blast hits to 124478 proteins in 3942 species: Archae - 195; Bacteria - 14619; Metazoa - 47448; Fungi - 14527; Plants - 27603; Viruses - 509; Other Eukaryotes - 21864 (source: NCBI BLink). & (p53681|crk_dauca : 424.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 364.0) no description available & (gnl|cdd|47550 : 260.0) no description available & (reliability: 1562.0) & (original description: Putative CPK28, Description = Calcium-dependent protein kinase 28, PFAM = PF00069;PF13499;PF13202)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold2491_59799-78533' '(at5g35980 : 824.0) yeast YAK1-related gene 1 (YAK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G17750.1); Has 91682 Blast hits to 90157 proteins in 2771 species: Archae - 99; Bacteria - 7981; Metazoa - 36897; Fungi - 11192; Plants - 18283; Viruses - 359; Other Eukaryotes - 16871 (source: NCBI BLink). & (gnl|cdd|35886 : 437.0) no description available & (gnl|cdd|29142 : 206.0) no description available & (q40517|ntf3_tobac : 121.0) Mitogen-activated protein kinase homolog NTF3 (EC 2.7.11.24) (P43) - Nicotiana tabacum (Common tobacco) & (reliability: 1648.0) & (original description: Putative DYRK, Description = Dual-specificity tyrosine-(Y)-phosphorylation regulated kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold2557_21528-41236' '(at5g03730 : 971.0) Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed.; CONSTITUTIVE TRIPLE RESPONSE 1 (CTR1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G24480.1); Has 126606 Blast hits to 124675 proteins in 4966 species: Archae - 112; Bacteria - 13843; Metazoa - 48138; Fungi - 11278; Plants - 33351; Viruses - 509; Other Eukaryotes - 19375 (source: NCBI BLink). & (gnl|cdd|35413 : 315.0) no description available & (gnl|cdd|87344 : 262.0) no description available & (q8lkz1|nork_pea : 119.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 1942.0) & (original description: Putative CTR1, Description = Serine/threonine-protein kinase CTR1, PFAM = PF14381;PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold2899_1-19510' '(at5g49470 : 628.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT1G67890.1). & (gnl|cdd|35413 : 326.0) no description available & (gnl|cdd|87344 : 251.0) no description available & (q8l4h4|nork_medtr : 118.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1256.0) & (original description: Putative EDR1, Description = Serine/threonine-protein kinase CTR1, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold3282_65793-74766' '(q8l4h4|nork_medtr : 842.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|36401 : 350.0) no description available & (at2g29000 : 326.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G28960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|87344 : 159.0) no description available & (reliability: 652.0) & (original description: Putative NORK, Description = Nodulation receptor kinase, PFAM = PF07714;PF12819)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold3637_28320-38196' '(at3g19980 : 644.0) Encodes catalytic subunit of serine/threonine protein phosphatase 2A. It can associate with phytochromes A and B in vitro. Mutant plants display an accelerated flowering phenotype.; "flower-specific, phytochrome-associated protein phosphatase 3" (FYPP3); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT1G50370.1); Has 6822 Blast hits to 6670 proteins in 515 species: Archae - 81; Bacteria - 277; Metazoa - 2341; Fungi - 1410; Plants - 975; Viruses - 8; Other Eukaryotes - 1730 (source: NCBI BLink). & (gnl|cdd|35594 : 584.0) no description available & (q9xgt7|pp2a3_orysa : 389.0) Serine/threonine-protein phosphatase PP2A-3 catalytic subunit (EC 3.1.3.16) - Oryza sativa (Rice) & (gnl|cdd|29063 : 346.0) no description available & (reliability: 1288.0) & (original description: Putative FYPP3, Description = Phytochrome-associated serine/threonine-protein phosphatase 3, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold4132_11118-19608' '(at1g03080 : 907.0) kinase interacting (KIP1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053), KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT3G22790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71206 : 133.0) no description available & (gnl|cdd|35383 : 121.0) no description available & (reliability: 1814.0) & (original description: Putative NET1C, Description = Kinase interacting protein 1-like, PFAM = PF07765)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold4402_79-4199' '(at5g10530 : 484.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G65600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 331.0) no description available & (gnl|cdd|29142 : 191.0) no description available & (q8lpb4|pskr_dauca : 171.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 874.0) & (original description: Putative LecRK, Description = Clade XVII lectin receptor kinase, PFAM = PF00139;PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold5257_48307-52664' '(gnl|cdd|35804 : 433.0) no description available & (at3g48260 : 409.0) Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases.; with no lysine (K) kinase 3 (WNK3); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 2 (TAIR:AT3G22420.1); Has 106620 Blast hits to 105555 proteins in 3648 species: Archae - 79; Bacteria - 10632; Metazoa - 39040; Fungi - 10406; Plants - 28734; Viruses - 420; Other Eukaryotes - 17309 (source: NCBI BLink). & (gnl|cdd|47550 : 167.0) no description available & (q336x9|mpk6_orysa : 82.0) Mitogen-activated protein kinase 6 (EC 2.7.11.24) (MAP kinase 6) - Oryza sativa (Rice) & (reliability: 818.0) & (original description: Putative oipk, Description = WNK kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold5644_798-12433' '(at3g03940 : 1170.0) Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT5G18190.1); Has 16177 Blast hits to 16113 proteins in 1419 species: Archae - 20; Bacteria - 5310; Metazoa - 4811; Fungi - 1519; Plants - 1815; Viruses - 223; Other Eukaryotes - 2479 (source: NCBI BLink). & (gnl|cdd|36379 : 247.0) no description available & (gnl|cdd|29142 : 111.0) no description available & (reliability: 2340.0) & (original description: Putative CKI, Description = Casein kinase I, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold5960_6038-13644' '(at3g44620 : 276.0) protein tyrosine phosphatases;protein tyrosine phosphatases; FUNCTIONS IN: protein tyrosine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase/arsenate reductase (InterPro:IPR000106), Protein-tyrosine phosphatase, low molecular weight (InterPro:IPR017867). & (gnl|cdd|38427 : 200.0) no description available & (gnl|cdd|29014 : 156.0) no description available & (reliability: 552.0) & (original description: Putative wzb, Description = Low molecular weight phosphotyrosine protein phosphatase, PFAM = PF01451)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold6130_45133-54673' '(at4g08500 : 406.0) Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301. Mediates cold, salt, cadmium and wounding stress signalling. Phosphorylates MEK1.; MAPK/ERK kinase kinase 1 (MEKK1); FUNCTIONS IN: protein binding, kinase binding, DNA binding, MAP kinase kinase kinase activity, kinase activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 9 (TAIR:AT4G08480.1); Has 132336 Blast hits to 130259 proteins in 4567 species: Archae - 142; Bacteria - 14700; Metazoa - 49430; Fungi - 12971; Plants - 32949; Viruses - 685; Other Eukaryotes - 21459 (source: NCBI BLink). & (gnl|cdd|35419 : 283.0) no description available & (gnl|cdd|29142 : 267.0) no description available & (q5qn75|m2k1_orysa : 124.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 748.0) & (original description: Putative MEKK1, Description = Mitogen-activated protein kinase kinase kinase 1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold6189_27012-39511' '(at5g28900 : 753.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, cytoplasm; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G28850.2); Has 645 Blast hits to 644 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 308; Fungi - 2; Plants - 148; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|37773 : 588.0) no description available & (reliability: 1506.0) & (original description: Putative B''BETA, Description = Serine/threonine protein phosphatase 2A regulatory subunit B''beta, PFAM = PF13202;PF13499)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold6283_44339-47307' '(gnl|cdd|35419 : 223.0) no description available & (gnl|cdd|47550 : 211.0) no description available & (at5g67080 : 210.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 19 (MAPKKK19); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, LP.06 six leaves visible, M germinated pollen stage, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 20 (TAIR:AT3G50310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p28582|cdpk_dauca : 110.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 420.0) & (original description: Putative MAPKKK19, Description = Mitogen-activated protein kinase kinase kinase A, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold7092_47918-56213' '(at5g51760 : 258.0) Encodes AHG1 (ABA-hypersensitive germination 1), a putative protein phosphatase 2C (PP2C). Expressed in seeds. AHG1 functions in seed development and germination.; ABA-hypersensitive germination 1 (AHG1); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: seed germination, response to abscisic acid stimulus, seed development; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: seed; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 3 (TAIR:AT2G29380.1); Has 6503 Blast hits to 6478 proteins in 370 species: Archae - 6; Bacteria - 133; Metazoa - 1626; Fungi - 786; Plants - 2672; Viruses - 7; Other Eukaryotes - 1273 (source: NCBI BLink). & (gnl|cdd|35917 : 222.0) no description available & (gnl|cdd|47660 : 222.0) no description available & (reliability: 516.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481;PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold7425_46158-56177' '(gnl|cdd|58037 : 283.0) no description available & (at2g18390 : 280.0) Encodes a member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. Mutant has abnormal mitosis and cell cycle control during seed development.; TITAN 5 (TTN5); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: in 6 processes; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor A1B (TAIR:AT5G14670.1); Has 10006 Blast hits to 10000 proteins in 420 species: Archae - 13; Bacteria - 39; Metazoa - 4544; Fungi - 1627; Plants - 1505; Viruses - 3; Other Eukaryotes - 2275 (source: NCBI BLink). & (gnl|cdd|35296 : 271.0) no description available & (q06396|arf1_orysa : 142.0) ADP-ribosylation factor 1 (13 kDa cold-induced protein) - Oryza sativa (Rice) & (reliability: 560.0) & (original description: Putative ARL2, Description = ADP-ribosylation factor-like protein 2, PFAM = PF00025)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold8206_29215-42355' '(at5g63610 : 649.0) significant sequence similarity to plant and animal cyclin-dependent protein kinases, and was classified as an E-type CDK with a SPTAIRE cyclin binding motif in the kinase domain.; cyclin-dependent kinase E;1 (CDKE;1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G67580.2); Has 122304 Blast hits to 120929 proteins in 4501 species: Archae - 96; Bacteria - 13482; Metazoa - 46432; Fungi - 12531; Plants - 29277; Viruses - 477; Other Eukaryotes - 20009 (source: NCBI BLink). & (gnl|cdd|35885 : 489.0) no description available & (gnl|cdd|47550 : 249.0) no description available & (p23111|cdc2_maize : 224.0) Cell division control protein 2 homolog (EC 2.7.11.22) (EC 2.7.11.23) (p34cdc2) - Zea mays (Maize) & (reliability: 1298.0) & (original description: Putative cdk8, Description = Cyclin-dependent kinase 8, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold8453_24265-28033' '(at2g30360 : 481.0) Encodes a SOS2-like protein kinase that is a member of the CBL-interacting protein kinase family.Loss of function mutants show a decrease in sensitivity to high pH.Phosphorylates AHA2, a plasma membrane H+ ATPase.This phosphorylation appears to regulate the activity of the proton transporter.; SOS3-interacting protein 4 (SIP4); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: serine/threonine protein kinase 1 (TAIR:AT5G01820.1); Has 132389 Blast hits to 130226 proteins in 4650 species: Archae - 184; Bacteria - 15582; Metazoa - 48520; Fungi - 13393; Plants - 32054; Viruses - 541; Other Eukaryotes - 22115 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 347.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 341.0) no description available & (gnl|cdd|29142 : 285.0) no description available & (reliability: 962.0) & (original description: Putative CIPK11, Description = CBL-interacting serine/threonine-protein kinase 11, PFAM = PF03822;PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold8847_41630-44994' '(at4g18700 : 719.0) Encodes CBL-interacting protein kinase 12 (CIPK12).; CBL-interacting protein kinase 12 (CIPK12); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 19 (TAIR:AT5G45810.1); Has 132740 Blast hits to 130588 proteins in 4556 species: Archae - 205; Bacteria - 15732; Metazoa - 48597; Fungi - 13262; Plants - 32355; Viruses - 523; Other Eukaryotes - 22066 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 431.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 359.0) no description available & (gnl|cdd|29142 : 298.0) no description available & (reliability: 1438.0) & (original description: Putative CIPK12, Description = CBL-interacting serine/threonine-protein kinase 12, PFAM = PF00069;PF03822)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold9045_32157-40823' '(at3g25800 : 1082.0) one of three genes encoding the protein phosphatase 2A regulatory subunit; protein phosphatase 2A subunit A2 (PP2AA2); FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: response to cadmium ion, regulation of phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A subunit A3 (TAIR:AT1G13320.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p36875|2aaa_pea : 678.0) Protein phosphatase PP2A regulatory subunit A (PR65) (Fragment) - Pisum sativum (Garden pea) & (gnl|cdd|35432 : 637.0) no description available & (reliability: 2164.0) & (original description: Putative PP2AA2, Description = Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform, PFAM = PF02985;PF13646)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold11178_4816-12509' '(at2g25620 : 511.0) Encodes DBP1, a member of the DBP factors (DNA-binding protein phosphatases) featuring sequence-specific DNA-binding and protein phosphatase activity. DBP1 is involved in plant-potyvirus interactions. Loss-of-function of DBP1 renders resistance to potyviruses.; DNA-binding protein phosphatase 1 (DBP1); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: regulation of defense response to virus; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G33700.1); Has 7196 Blast hits to 7030 proteins in 671 species: Archae - 12; Bacteria - 774; Metazoa - 1729; Fungi - 719; Plants - 2627; Viruses - 7; Other Eukaryotes - 1328 (source: NCBI BLink). & (gnl|cdd|29062 : 239.0) no description available & (gnl|cdd|35917 : 228.0) no description available & (reliability: 1022.0) & (original description: Putative At2g25620, Description = Probable protein phosphatase 2C 22, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold11324_37056-46598' '(at1g34750 : 423.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: phytochrome-associated protein phosphatase type 2C (TAIR:AT1G22280.1); Has 7616 Blast hits to 7609 proteins in 922 species: Archae - 14; Bacteria - 1457; Metazoa - 1483; Fungi - 777; Plants - 2623; Viruses - 11; Other Eukaryotes - 1251 (source: NCBI BLink). & (gnl|cdd|35917 : 246.0) no description available & (gnl|cdd|29062 : 232.0) no description available & (reliability: 846.0) & (original description: Putative At1g34750, Description = Probable protein phosphatase 2C 10, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold11781_37381-43029' '(at5g59010 : 730.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT3G54030.1); Has 21140 Blast hits to 20932 proteins in 637 species: Archae - 6; Bacteria - 562; Metazoa - 1681; Fungi - 205; Plants - 18085; Viruses - 31; Other Eukaryotes - 570 (source: NCBI BLink). & (gnl|cdd|36401 : 196.0) no description available & (gnl|cdd|47549 : 111.0) no description available & (o24585|cri4_maize : 105.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 1390.0) & (original description: Putative At5g41260, Description = Probable serine/threonine-protein kinase At5g41260, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold12526_1983-17971' '(at2g27210 : 419.0) BRI1 suppressor 1 (BSU1)-like 3 (BSL3); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, iron ion binding, phosphoprotein phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Metallophosphoesterase (InterPro:IPR004843), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 2 (TAIR:AT1G08420.2). & (q2qm47|bsl2_orysa : 402.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35600 : 183.0) no description available & (reliability: 834.0) & (original description: Putative BSL1, Description = Serine/threonine-protein phosphatase, PFAM = PF13418;PF13418)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold13612_30918-41587' '(at1g29370 : 343.0) Kinase-related protein of unknown function (DUF1296); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1296 (InterPro:IPR009719); BEST Arabidopsis thaliana protein match is: Kinase-related protein of unknown function (DUF1296) (TAIR:AT1G29350.1); Has 14234 Blast hits to 8102 proteins in 480 species: Archae - 0; Bacteria - 599; Metazoa - 5712; Fungi - 1715; Plants - 1064; Viruses - 60; Other Eukaryotes - 5084 (source: NCBI BLink). & (gnl|cdd|70439 : 101.0) no description available & (reliability: 686.0) & (original description: Putative At1g29350, Description = Kinase-related family protein, PFAM = PF06972)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold14058_30855-36066' '(at3g12620 : 541.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G55050.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35919 : 400.0) no description available & (gnl|cdd|29062 : 190.0) no description available & (reliability: 1082.0) & (original description: Putative pp2C2, Description = Serine/threonine phosphatase family, 2C domain protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold14073_35732-41597' '(at5g50000 : 668.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G01490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35413 : 319.0) no description available & (gnl|cdd|87344 : 232.0) no description available & (p17801|kpro_maize : 95.1) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 1336.0) & (original description: Putative DR01, Description = Protein kinase family protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold14165_4262-9047' '(p48490|pp1_phavu : 245.0) Serine/threonine-protein phosphatase PP1 (EC 3.1.3.16) - Phaseolus vulgaris (Kidney bean) (French bean) & (at5g27840 : 237.0) encodes a serine/threonine protein phosphatase expressed in expressed in roots, rosettes and flowers.; TOPP8; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT3G05580.1); Has 7274 Blast hits to 7088 proteins in 679 species: Archae - 78; Bacteria - 658; Metazoa - 2391; Fungi - 1410; Plants - 989; Viruses - 10; Other Eukaryotes - 1738 (source: NCBI BLink). & (gnl|cdd|35595 : 224.0) no description available & (gnl|cdd|47495 : 194.0) no description available & (reliability: 474.0) & (original description: Putative bimG, Description = Serine/threonine-protein phosphatase, PFAM = PF00149;PF16891)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold14641_33019-39437' '(at5g08160 : 548.0) Encodes a serine/threonine protein kinase.; serine/threonine protein kinase 3 (PK3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G32850.2); Has 37972 Blast hits to 37793 proteins in 1677 species: Archae - 67; Bacteria - 5765; Metazoa - 14817; Fungi - 4512; Plants - 5796; Viruses - 46; Other Eukaryotes - 6969 (source: NCBI BLink). & (gnl|cdd|37556 : 362.0) no description available & (gnl|cdd|29142 : 124.0) no description available & (reliability: 1096.0) & (original description: Putative PK3, Description = AT5g08160, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold14677_10221-24422' '(at5g23720 : 589.0) Encodes a protein tyrosine phosphatase Propyzamide-Hypersensitive 1 (PHS1). One of the mutant alleles, phs1-1, is hypersensitive to the microtubule-destabilizing drug propyzamide, suggesting that PHS1 may be involved in phosphorylation cascades that control the dynamics of cortical microtubules in plant cells. A second allele, phs1-3, is hypersensitive to abscisic acid, indicating a possible involvement of PHS1 in ABA signalling.; PROPYZAMIDE-HYPERSENSITIVE 1 (PHS1); FUNCTIONS IN: protein tyrosine/serine/threonine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: cortical microtubule organization, regulation of gene expression, response to abscisic acid stimulus, regulation of stomatal movement; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422), Protein kinase-like domain (InterPro:IPR011009), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Actin-fragmin kinase, catalytic (InterPro:IPR015275), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340); BEST Arabidopsis thaliana protein match is: dual specificity protein phosphatase 1 (TAIR:AT3G23610.2); Has 3765 Blast hits to 3755 proteins in 331 species: Archae - 11; Bacteria - 94; Metazoa - 2032; Fungi - 332; Plants - 347; Viruses - 172; Other Eukaryotes - 777 (source: NCBI BLink). & (gnl|cdd|87833 : 164.0) no description available & (gnl|cdd|36928 : 113.0) no description available & (reliability: 1178.0) & (original description: Putative PHS1, Description = Dual specificity phosphatase family protein, PFAM = PF09192;PF00782)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold14820_16507-22244' '(at1g47380 : 689.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G68410.2); Has 5162 Blast hits to 5161 proteins in 415 species: Archae - 0; Bacteria - 290; Metazoa - 1152; Fungi - 442; Plants - 2230; Viruses - 7; Other Eukaryotes - 1041 (source: NCBI BLink). & (gnl|cdd|35917 : 180.0) no description available & (gnl|cdd|29062 : 179.0) no description available & (reliability: 1378.0) & (original description: Putative At1g47380, Description = Probable protein phosphatase 2C 12, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold15324_1-28144' '(at4g24100 : 752.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G10730.1); Has 125358 Blast hits to 123605 proteins in 4454 species: Archae - 114; Bacteria - 14309; Metazoa - 46798; Fungi - 12057; Plants - 31507; Viruses - 632; Other Eukaryotes - 19941 (source: NCBI BLink). & (gnl|cdd|35802 : 442.0) no description available & (gnl|cdd|29142 : 234.0) no description available & (q5qn75|m2k1_orysa : 112.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1504.0) & (original description: Putative OXSR1, Description = Serine/threonine-protein kinase fray2, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold16236_24772-31377' '(at1g05000 : 275.0) Phosphotyrosine protein phosphatases superfamily protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic (InterPro:IPR020428), Protein-tyrosine phosphatase, SIW14-like (InterPro:IPR004861); BEST Arabidopsis thaliana protein match is: Phosphotyrosine protein phosphatases superfamily protein (TAIR:AT2G32960.1); Has 580 Blast hits to 572 proteins in 119 species: Archae - 0; Bacteria - 14; Metazoa - 1; Fungi - 314; Plants - 145; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|36785 : 234.0) no description available & (gnl|cdd|86260 : 199.0) no description available & (reliability: 550.0) & (original description: Putative PTP, Description = Tyrosine-protein phosphatase, PFAM = PF03162)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold16840_1877-9091' '(at5g66210 : 767.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p53681|crk_dauca : 439.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 371.0) no description available & (gnl|cdd|29142 : 261.0) no description available & (reliability: 1530.0) & (original description: Putative CPK16, Description = Calcium-dependent protein kinase 16, PFAM = PF13202;PF13499;PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold18171_1-6705' '(p48489|pp1_orysa : 558.0) Serine/threonine-protein phosphatase PP1 (EC 3.1.3.16) - Oryza sativa (Rice) & (at2g39840 : 552.0) Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers.; type one serine/threonine protein phosphatase 4 (TOPP4); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: type one serine/threonine protein phosphatase 2 (TAIR:AT5G59160.3); Has 7176 Blast hits to 6978 proteins in 618 species: Archae - 78; Bacteria - 533; Metazoa - 2415; Fungi - 1410; Plants - 987; Viruses - 16; Other Eukaryotes - 1737 (source: NCBI BLink). & (gnl|cdd|35595 : 463.0) no description available & (gnl|cdd|29063 : 408.0) no description available & (reliability: 1104.0) & (original description: Putative bimG, Description = Serine/threonine-protein phosphatase, PFAM = PF00149;PF16891)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold18550_22838-28663' '(at1g05000 : 295.0) Phosphotyrosine protein phosphatases superfamily protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic (InterPro:IPR020428), Protein-tyrosine phosphatase, SIW14-like (InterPro:IPR004861); BEST Arabidopsis thaliana protein match is: Phosphotyrosine protein phosphatases superfamily protein (TAIR:AT2G32960.1); Has 580 Blast hits to 572 proteins in 119 species: Archae - 0; Bacteria - 14; Metazoa - 1; Fungi - 314; Plants - 145; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|36785 : 252.0) no description available & (gnl|cdd|86260 : 207.0) no description available & (reliability: 590.0) & (original description: Putative PTP, Description = Tyrosine-protein phosphatase, PFAM = PF03162)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold19755_9320-18706' '(at1g73670 : 637.0) member of MAP Kinase; MAP kinase 15 (MPK15); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18150.3); Has 118424 Blast hits to 117259 proteins in 3821 species: Archae - 110; Bacteria - 13457; Metazoa - 43793; Fungi - 12258; Plants - 28693; Viruses - 571; Other Eukaryotes - 19542 (source: NCBI BLink). & (q53n72|mpk15_orysa : 622.0) Mitogen-activated protein kinase 15 (EC 2.7.11.24) (MAP kinase 15) - Oryza sativa (Rice) & (gnl|cdd|35879 : 474.0) no description available & (gnl|cdd|29142 : 270.0) no description available & (reliability: 1222.0) & (original description: Putative MPK15, Description = Mitogen-activated protein kinase 15, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold20730_26153-29223' '(at4g36950 : 311.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 21 (MAPKKK21); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 19 (TAIR:AT5G67080.1); Has 107885 Blast hits to 106960 proteins in 3009 species: Archae - 125; Bacteria - 11734; Metazoa - 40866; Fungi - 11018; Plants - 26454; Viruses - 500; Other Eukaryotes - 17188 (source: NCBI BLink). & (gnl|cdd|35419 : 256.0) no description available & (gnl|cdd|29142 : 230.0) no description available & (q6x4a2|cipk1_orysa : 103.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 612.0) & (original description: Putative MAPKKK21, Description = Mitogen-activated protein kinase kinase kinase 21, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold21110_3860-7441' '(gnl|cdd|80482 : 146.0) no description available & (gnl|cdd|36848 : 138.0) no description available & (at4g25130 : 113.0) Encodes a chloroplast-localized methionine sulfoxide reductase that is a member of the MSRA family. Involved in protection of chloroplasts from oxidative stress.; peptide met sulfoxide reductase 4 (PMSR4); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: protein modification process, cellular response to oxidative stress; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Peptide methionine sulphoxide reductase MsrA (InterPro:IPR002569); BEST Arabidopsis thaliana protein match is: peptidemethionine sulfoxide reductase 1 (TAIR:AT5G61640.1); Has 10332 Blast hits to 10330 proteins in 2437 species: Archae - 129; Bacteria - 6211; Metazoa - 196; Fungi - 136; Plants - 235; Viruses - 1; Other Eukaryotes - 3424 (source: NCBI BLink). & (q9sec2|msra_lacsa : 112.0) Peptide methionine sulfoxide reductase (EC 1.8.4.11) (Protein-methionine-S-oxide reductase) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase) - Lactuca sativa (Garden lettuce) & (reliability: 226.0) & (original description: Putative PGSC0003DMG400010414, Description = Peptide methionine sulfoxide reductase MsrA, PFAM = PF01625)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold21471_9044-22098' '(at5g55260 : 619.0) Encodes a protein with similarity to the catalytic subunit of the mammalian PPX protein phospatase.; protein phosphatase X 2 (PPX2); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase X 1 (TAIR:AT4G26720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35593 : 576.0) no description available & (q9xgh7|pp2a_tobac : 451.0) Serine/threonine-protein phosphatase PP2A catalytic subunit (EC 3.1.3.16) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29063 : 374.0) no description available & (reliability: 1238.0) & (original description: Putative mts, Description = Serine/threonine-protein phosphatase, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold21492_24309-31730' '(gnl|cdd|36401 : 145.0) no description available & (at1g11050 : 116.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor-like kinase in in flowers 3 (TAIR:AT2G48010.1); Has 115297 Blast hits to 114175 proteins in 4324 species: Archae - 104; Bacteria - 13350; Metazoa - 42303; Fungi - 9816; Plants - 32853; Viruses - 335; Other Eukaryotes - 16536 (source: NCBI BLink). & (gnl|cdd|29142 : 107.0) no description available & (o24585|cri4_maize : 89.7) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 220.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold21559_1-4490' '(at2g42810 : 508.0) Encodes a phytochrome-specific type 5 serine/threonine protein phosphatase. It dephosphorylates active Pfr-phytochromes. Controls light signal flux by enhancing phytochrome stability and affinity for a signal transducer. The gene is alternately spliced. This variant is an integral membrane protein localized to the ER and nuclear envelope.; protein phosphatase 5.2 (PP5.2); FUNCTIONS IN: protein binding, phosphoprotein phosphatase activity, protein serine/threonine phosphatase activity; INVOLVED IN: response to cadmium ion, nucleocytoplasmic transport, red or far-red light signaling pathway; LOCATED IN: nuclear envelope, integral to endoplasmic reticulum membrane, nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Metallophosphoesterase (InterPro:IPR004843), Protein phosphatase 5 (InterPro:IPR011236), Tetratricopeptide-like helical (InterPro:IPR011990), Serine/threonine phosphatase, PPP5 (InterPro:IPR013235), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT5G27840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35597 : 401.0) no description available & (gnl|cdd|29063 : 283.0) no description available & (p48489|pp1_orysa : 190.0) Serine/threonine-protein phosphatase PP1 (EC 3.1.3.16) - Oryza sativa (Rice) & (reliability: 1016.0) & (original description: Putative PPU, Description = Protein phosphatase U, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold22205_14904-28804' '(gnl|cdd|35887 : 622.0) no description available & (at2g23070 : 617.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase alpha 1 (TAIR:AT5G67380.1); Has 86281 Blast hits to 85416 proteins in 2606 species: Archae - 75; Bacteria - 9731; Metazoa - 33171; Fungi - 11404; Plants - 14646; Viruses - 368; Other Eukaryotes - 16886 (source: NCBI BLink). & (p28523|csk2a_maize : 559.0) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II) (CK2-alpha) - Zea mays (Maize) & (gnl|cdd|84488 : 206.0) no description available & (reliability: 1234.0) & (original description: Putative casK, Description = Casein kinase II subunit alpha, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold22616_21592-29483' '(at1g53050 : 653.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G09600.1); Has 124596 Blast hits to 123234 proteins in 4130 species: Archae - 92; Bacteria - 13981; Metazoa - 46101; Fungi - 12764; Plants - 31065; Viruses - 453; Other Eukaryotes - 20140 (source: NCBI BLink). & (gnl|cdd|35820 : 619.0) no description available & (gnl|cdd|29142 : 256.0) no description available & (q05006|cdc22_medsa : 228.0) Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Medicago sativa (Alfalfa) & (reliability: 1306.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold22782_3193-11095' '(at4g33080 : 194.0) AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), Protein kinase-like domain (InterPro:IPR011009), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT2G19400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35825 : 162.0) no description available & (reliability: 388.0) & (original description: Putative ndrA, Description = Serine/threonine-protein kinase CBK1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold22911_17622-23478' '(at5g10480 : 286.0) Protein tyrosine phosphatase-like involved in cell division and differentiation. Interacts with CDKA;1 only in its phosphorylated form, preventing dephosphorylation. Overexpression slowed down cell division in suspension cell cultures at the G2-to-M transition and early mitosis and inhibited Arabidopsis seedling growth. Localized in the cytoplasm of dividing cells but moved into the nucleus upon cell differentiation. Based on complementation of yeast mutant PAS2 has acyl-CoA dehydratase activity. It interacts with CER10, a component of the microsomal fatty acid elongase complex, suggesting a role in synthesis of VLCFAs (very long chain fatty acids).; PASTICCINO 2 (PAS2); CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase-like, PTPLA (InterPro:IPR007482); BEST Arabidopsis thaliana protein match is: Protein-tyrosine phosphatase-like, PTPLA (TAIR:AT5G59770.1). & (gnl|cdd|38397 : 182.0) no description available & (gnl|cdd|67978 : 168.0) no description available & (reliability: 572.0) & (original description: Putative PAS2A, Description = Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2A, PFAM = PF04387)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold23537_21077-30262' '(at1g18030 : 366.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G51470.1); Has 5792 Blast hits to 5781 proteins in 307 species: Archae - 2; Bacteria - 31; Metazoa - 1378; Fungi - 630; Plants - 2460; Viruses - 9; Other Eukaryotes - 1282 (source: NCBI BLink). & (gnl|cdd|29062 : 174.0) no description available & (gnl|cdd|35917 : 173.0) no description available & (reliability: 732.0) & (original description: Putative ILKAP, Description = Integrin-linked kinase-associated serine/threonine phosphatase 2C, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold23540_27171-31168' '(at2g29380 : 325.0) highly ABA-induced PP2C gene 3 (HAI3); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 2 (TAIR:AT1G07430.1); Has 6960 Blast hits to 6933 proteins in 604 species: Archae - 4; Bacteria - 618; Metazoa - 1585; Fungi - 779; Plants - 2700; Viruses - 7; Other Eukaryotes - 1267 (source: NCBI BLink). & (gnl|cdd|35917 : 238.0) no description available & (gnl|cdd|47660 : 231.0) no description available & (reliability: 650.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold23547_22140-26711' '(at4g21860 : 159.0) methionine sulfoxide reductase B 2 (MSRB2); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B3 (TAIR:AT4G04800.1). & (gnl|cdd|36074 : 145.0) no description available & (gnl|cdd|85585 : 129.0) no description available & (reliability: 318.0) & (original description: Putative MsrB3, Description = Methionine-R-sulfoxide reductase B3 protein, PFAM = PF01641)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold23939_18558-23445' '(at3g55270 : 510.0) MAP kinase phosphatase (MKP1); mitogen-activated protein kinase phosphatase 1 (MKP1); CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: MAPK phosphatase 2 (TAIR:AT3G06110.3); Has 4115 Blast hits to 4050 proteins in 297 species: Archae - 2; Bacteria - 48; Metazoa - 2335; Fungi - 439; Plants - 312; Viruses - 98; Other Eukaryotes - 881 (source: NCBI BLink). & (gnl|cdd|29029 : 172.0) no description available & (gnl|cdd|36928 : 151.0) no description available & (reliability: 1020.0) & (original description: Putative NtMKP1, Description = MAP kinase phosphatase, PFAM = PF00782;PF00626)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold24042_1-15197' '(at4g31860 : 595.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G25070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35916 : 237.0) no description available & (gnl|cdd|29062 : 228.0) no description available & (reliability: 1190.0) & (original description: Putative ptc2, Description = Protein phosphatase 2C, PFAM = PF00481;PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold25240_20230-28733' '(at2g04550 : 343.0) Encodes a protein phosphatase that interacts with MPK12, but not with other MAP kinases. It can dephosphorylate a dually phosphorylated MPK12 in vitro and can inactivate MPK12 in vivo. ibr5 mutants have reduced sensitivity to auxin and abscisic acid. IBR5 promotes auxin responses, including auxin-inducible transcription, differently than the TIR1 auxin receptor and without destabilizing Aux/IAA repressor proteins.; indole-3-butyric acid response 5 (IBR5); CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: dual specificity protein phosphatase 1 (TAIR:AT3G23610.2); Has 3359 Blast hits to 3359 proteins in 285 species: Archae - 9; Bacteria - 32; Metazoa - 1975; Fungi - 228; Plants - 239; Viruses - 200; Other Eukaryotes - 676 (source: NCBI BLink). & (gnl|cdd|29029 : 133.0) no description available & (gnl|cdd|36928 : 127.0) no description available & (reliability: 686.0) & (original description: Putative IBR5, Description = Protein-tyrosine-phosphatase IBR5, PFAM = PF00782)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold26303_11633-20201' '(at2g35050 : 860.0) Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT1G16270.2); Has 123661 Blast hits to 120809 proteins in 5002 species: Archae - 120; Bacteria - 13694; Metazoa - 47002; Fungi - 10895; Plants - 32616; Viruses - 447; Other Eukaryotes - 18887 (source: NCBI BLink). & (gnl|cdd|35413 : 316.0) no description available & (gnl|cdd|87344 : 245.0) no description available & (q8l4h4|nork_medtr : 109.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1720.0) & (original description: Putative At1g79570, Description = Putative uncharacterized protein At1g79570, PFAM = PF07714;PF00564)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold26559_16439-20016' '(at1g53700 : 517.0) The WAG1 and its homolog, WAG2 each encodes a protein-serine/threonine kinase that are nearly 70% identical to PsPK3 protein. All three together with CsPK3 belong to PsPK3-type kinases. At the N-terminus, all four possess a serine/threonine-rich domain. They are closely related to Arabidopsis kinases PINOID. wag1/wag2 double mutants exhibit a pronounced wavy root phenotype when grown vertically on agar plates (while wild-type plants develop wavy roots only on plates inclined to angles less than 90 degrees), indicating an overlapping role for WAG1 and WAG2 as suppressors of root waving. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons.; WAG 1 (WAG1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G14370.1); Has 97126 Blast hits to 96120 proteins in 2766 species: Archae - 63; Bacteria - 12090; Metazoa - 36361; Fungi - 11348; Plants - 19901; Viruses - 394; Other Eukaryotes - 16969 (source: NCBI BLink). & (gnl|cdd|35830 : 496.0) no description available & (p47997|g11a_orysa : 334.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 236.0) no description available & (reliability: 1004.0) & (original description: Putative WAG2, Description = Serine/threonine-protein kinase WAG2, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold26763_14390-20562' '(at3g16030 : 220.0) CALLUS EXPRESSION OF RBCS 101 (CES101); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT4G21390.1); Has 121576 Blast hits to 119500 proteins in 4422 species: Archae - 101; Bacteria - 13477; Metazoa - 44302; Fungi - 10440; Plants - 35232; Viruses - 450; Other Eukaryotes - 17574 (source: NCBI BLink). & (gnl|cdd|36401 : 189.0) no description available & (p07761|slsg6_braol : 137.0) S-locus-specific glycoprotein S6 precursor (SLSG-6) - Brassica oleracea (Wild cabbage) & (gnl|cdd|47549 : 109.0) no description available & (reliability: 440.0) & (original description: Putative At1g67520, Description = Serine/threonine-protein kinase PBS1, putative, PFAM = PF08276;PF07714;PF01453)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold27004_16414-27291' '(at1g73460 : 1254.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane, cytoplasm; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G73450.1); Has 92811 Blast hits to 90539 proteins in 3072 species: Archae - 97; Bacteria - 11008; Metazoa - 34744; Fungi - 12175; Plants - 16778; Viruses - 387; Other Eukaryotes - 17622 (source: NCBI BLink). & (gnl|cdd|35886 : 449.0) no description available & (gnl|cdd|29142 : 202.0) no description available & (q5sn53|mpk8_orysa : 117.0) Mitogen-activated protein kinase 8 (EC 2.7.11.24) (MAP kinase 8) (OsWJUMK1) (Wound- and JA-uninducible MAP kinase 1) - Oryza sativa (Rice) & (reliability: 2508.0) & (original description: Putative DYRK2, Description = Dual-specificity tyrosine regulated protein kinase 2, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold28520_13581-18567' '(at1g09020 : 152.0) putative activator subunit of SNF1-related protein kinase; homolog of yeast sucrose nonfermenting 4 (SNF4); CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase-related (TAIR:AT1G27070.1); Has 1379 Blast hits to 1368 proteins in 272 species: Archae - 14; Bacteria - 104; Metazoa - 613; Fungi - 295; Plants - 229; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative , Description = Sucrose nonfermenting 4, PFAM = PF16561)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold30293_1121-11656' '(at1g09020 : 640.0) putative activator subunit of SNF1-related protein kinase; homolog of yeast sucrose nonfermenting 4 (SNF4); CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase-related (TAIR:AT1G27070.1); Has 1379 Blast hits to 1368 proteins in 272 species: Archae - 14; Bacteria - 104; Metazoa - 613; Fungi - 295; Plants - 229; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36975 : 142.0) no description available & (gnl|cdd|73139 : 122.0) no description available & (reliability: 1280.0) & (original description: Putative SNF4, Description = Sucrose nonfermenting 4-like protein, PFAM = PF16561;PF00571;PF00571)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold32808_9803-21606' '(at1g58210 : 266.0) EMBRYO DEFECTIVE 1674 (EMB1674); CONTAINS InterPro DOMAIN/s: SANT associated (InterPro:IPR015216), KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT1G09720.1); Has 30818 Blast hits to 19641 proteins in 1442 species: Archae - 565; Bacteria - 3414; Metazoa - 15518; Fungi - 2982; Plants - 1779; Viruses - 78; Other Eukaryotes - 6482 (source: NCBI BLink). & (gnl|cdd|71206 : 130.0) no description available & (reliability: 532.0) & (original description: Putative KIP1, Description = Kinase interacting family protein, putative, PFAM = PF07765)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold32833_898-5321' '(at4g32250 : 688.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: protein kinases;ubiquitin-protein ligases (TAIR:AT5G13530.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35419 : 139.0) no description available & (gnl|cdd|29142 : 139.0) no description available & (reliability: 1376.0) & (original description: Putative BnaC01g06260D, Description = BnaC01g06260D protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold33384_1132-8111' '(at3g55050 : 494.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G12620.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35919 : 367.0) no description available & (gnl|cdd|29062 : 168.0) no description available & (reliability: 988.0) & (original description: Putative pp2C2, Description = Serine/threonine phosphatase family, 2C domain protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold34119_4011-7799' '(q84tc6|sapk2_orysa : 183.0) Serine/threonine-protein kinase SAPK2 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 2) - Oryza sativa (Rice) & (at1g78290 : 181.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to karrikin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G33950.1); Has 112604 Blast hits to 110873 proteins in 3029 species: Archae - 114; Bacteria - 13128; Metazoa - 41421; Fungi - 12195; Plants - 25871; Viruses - 459; Other Eukaryotes - 19416 (source: NCBI BLink). & (gnl|cdd|29142 : 108.0) no description available & (gnl|cdd|35803 : 107.0) no description available & (reliability: 362.0) & (original description: Putative pk5, Description = Serine/threonine-protein kinase SAPK7, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold34430_16244-21853' '(at1g34750 : 405.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: phytochrome-associated protein phosphatase type 2C (TAIR:AT1G22280.1); Has 7616 Blast hits to 7609 proteins in 922 species: Archae - 14; Bacteria - 1457; Metazoa - 1483; Fungi - 777; Plants - 2623; Viruses - 11; Other Eukaryotes - 1251 (source: NCBI BLink). & (gnl|cdd|35917 : 246.0) no description available & (gnl|cdd|29062 : 224.0) no description available & (reliability: 810.0) & (original description: Putative Os04g0452000, Description = Probable protein phosphatase 2C 41, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold35150_3068-7674' '(at1g63500 : 565.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G41260.1); Has 34543 Blast hits to 34010 proteins in 1386 species: Archae - 8; Bacteria - 2627; Metazoa - 7585; Fungi - 183; Plants - 22470; Viruses - 98; Other Eukaryotes - 1572 (source: NCBI BLink). & (gnl|cdd|36401 : 112.0) no description available & (reliability: 1130.0) & (original description: Putative BSK2, Description = Putative serine/threonine-protein kinase, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold35150_7675-10383' '(at1g63500 : 142.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G41260.1); Has 34543 Blast hits to 34010 proteins in 1386 species: Archae - 8; Bacteria - 2627; Metazoa - 7585; Fungi - 183; Plants - 22470; Viruses - 98; Other Eukaryotes - 1572 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative BSK2, Description = Kinase family protein, PFAM = )' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold36452_13347-18391' '(at3g62260 : 197.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G48040.1); Has 7565 Blast hits to 7530 proteins in 876 species: Archae - 12; Bacteria - 1215; Metazoa - 1621; Fungi - 781; Plants - 2594; Viruses - 9; Other Eukaryotes - 1333 (source: NCBI BLink). & (gnl|cdd|35917 : 102.0) no description available & (gnl|cdd|29062 : 100.0) no description available & (reliability: 394.0) & (original description: Putative DBP1, Description = Phosphatase 2C family protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold36791_595-13972' '(at3g17850 : 1331.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G48490.3); Has 127463 Blast hits to 124461 proteins in 4737 species: Archae - 199; Bacteria - 14974; Metazoa - 47504; Fungi - 13120; Plants - 28745; Viruses - 516; Other Eukaryotes - 22405 (source: NCBI BLink). & (gnl|cdd|35826 : 536.0) no description available & (gnl|cdd|29142 : 272.0) no description available & (p15792|kpk1_phavu : 148.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 2662.0) & (original description: Putative IRE3, Description = Probable serine/threonine protein kinase IRE3, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold37090_5881-10212' '(at3g06620 : 275.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, catalytic domain (InterPro:IPR000719), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT5G49470.3); Has 125703 Blast hits to 124182 proteins in 4625 species: Archae - 237; Bacteria - 14697; Metazoa - 46775; Fungi - 11283; Plants - 33084; Viruses - 499; Other Eukaryotes - 19128 (source: NCBI BLink). & (reliability: 550.0) & (original description: Putative At1g67890, Description = Tyrosine protein kinase, PFAM = PF00989)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold37483_1-15505' '(at3g63340 : 205.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein serine/threonine phosphatase activity, protein kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein phosphatase 2C-related (InterPro:IPR001932), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), Protein phosphatase 2C (InterPro:IPR015655); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G63320.1). & (reliability: 410.0) & (original description: Putative At3g63330, Description = CMGC protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold37491_3967-12450' '(at5g53340 : 382.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G32120.1); Has 782 Blast hits to 773 proteins in 80 species: Archae - 0; Bacteria - 0; Metazoa - 225; Fungi - 0; Plants - 529; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|37499 : 300.0) no description available & (gnl|cdd|85659 : 108.0) no description available & (reliability: 764.0) & (original description: Putative GT31A4, Description = Hexosyltransferase, PFAM = PF01762)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold38128_9090-12622' '(at1g07430 : 315.0) highly ABA-induced PP2C gene 2 (HAI2); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 3 (TAIR:AT2G29380.1); Has 6753 Blast hits to 6737 proteins in 407 species: Archae - 6; Bacteria - 193; Metazoa - 1700; Fungi - 794; Plants - 2782; Viruses - 7; Other Eukaryotes - 1271 (source: NCBI BLink). & (gnl|cdd|35917 : 240.0) no description available & (gnl|cdd|47660 : 238.0) no description available & (reliability: 630.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold40174_1523-5653' '(at2g24765 : 135.0) GTPase required for Golgi targeting of GRIP domain proteins. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner; ADP-ribosylation factor 3 (ARF3); FUNCTIONS IN: protein binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: Golgi stack, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor A1B (TAIR:AT5G14670.1); Has 9110 Blast hits to 9109 proteins in 393 species: Archae - 2; Bacteria - 4; Metazoa - 4531; Fungi - 1457; Plants - 1456; Viruses - 3; Other Eukaryotes - 1657 (source: NCBI BLink). & (gnl|cdd|35293 : 119.0) no description available & (gnl|cdd|47508 : 116.0) no description available & (p51823|arf2_orysa : 106.0) ADP-ribosylation factor 2 - Oryza sativa (Rice) & (reliability: 270.0) & (original description: Putative arf1, Description = ADP-ribosylation factor 1, PFAM = PF00025)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold40269_13493-19287' '(at4g08960 : 495.0) phosphotyrosyl phosphatase activator (PTPA) family protein; FUNCTIONS IN: phosphatase activator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphotyrosyl phosphatase activator, PTPA (InterPro:IPR004327); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66749 : 412.0) no description available & (gnl|cdd|38078 : 401.0) no description available & (reliability: 990.0) & (original description: Putative PPP2R4, Description = Serine/threonine-protein phosphatase 2A activator, PFAM = PF03095)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold40927_6279-18984' '(at5g10480 : 104.0) Protein tyrosine phosphatase-like involved in cell division and differentiation. Interacts with CDKA;1 only in its phosphorylated form, preventing dephosphorylation. Overexpression slowed down cell division in suspension cell cultures at the G2-to-M transition and early mitosis and inhibited Arabidopsis seedling growth. Localized in the cytoplasm of dividing cells but moved into the nucleus upon cell differentiation. Based on complementation of yeast mutant PAS2 has acyl-CoA dehydratase activity. It interacts with CER10, a component of the microsomal fatty acid elongase complex, suggesting a role in synthesis of VLCFAs (very long chain fatty acids).; PASTICCINO 2 (PAS2); CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase-like, PTPLA (InterPro:IPR007482); BEST Arabidopsis thaliana protein match is: Protein-tyrosine phosphatase-like, PTPLA (TAIR:AT5G59770.1). & (reliability: 208.0) & (original description: Putative PAS2, Description = PAS2, PFAM = PF04387)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold41947_5492-14819' '(at5g49470 : 828.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT1G67890.1). & (gnl|cdd|35413 : 333.0) no description available & (gnl|cdd|87344 : 254.0) no description available & (q8l4h4|nork_medtr : 120.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1656.0) & (original description: Putative At5g49470, Description = PAS domain-containing protein tyrosine kinase, PFAM = PF00989;PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold42070_11965-18458' '(at4g38470 : 657.0) ACT-like protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Amino acid-binding ACT (InterPro:IPR002912), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: ACT-like protein tyrosine kinase family protein (TAIR:AT4G35780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 298.0) no description available & (gnl|cdd|47549 : 247.0) no description available & (q8lkz1|nork_pea : 123.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 1314.0) & (original description: Putative STY46, Description = Serine/threonine-protein kinase STY46, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold42758_5905-17418' '(at2g17520 : 608.0) Encodes a endoribonuclease/protein kinase IRE1-like protein that is predicted to form a type I transmembrane protein structure and contain kinase/endoribonuclease domains at their C-terminal halves. The transcript levels for several ER-stress responsive genes, including six protein disulfide isomerases (PDIs), BiP2, and AtbZIP60 are not affected in ire1-2 null mutants.; IRE1A; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), KEN domain, ribonuclease activator (InterPro:IPR010513), PUG domain (InterPro:IPR006567), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: inositol requiring 1-1 (TAIR:AT5G24360.1); Has 104790 Blast hits to 103944 proteins in 4127 species: Archae - 110; Bacteria - 12550; Metazoa - 37627; Fungi - 10369; Plants - 27162; Viruses - 328; Other Eukaryotes - 16644 (source: NCBI BLink). & (gnl|cdd|36245 : 522.0) no description available & (gnl|cdd|69972 : 180.0) no description available & (reliability: 1216.0) & (original description: Putative IRE1A, Description = Serine/threonine-protein kinase/endoribonuclease IRE1a, PFAM = PF06479;PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold42804_2316-9821' '(at3g48260 : 582.0) Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases.; with no lysine (K) kinase 3 (WNK3); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 2 (TAIR:AT3G22420.1); Has 106620 Blast hits to 105555 proteins in 3648 species: Archae - 79; Bacteria - 10632; Metazoa - 39040; Fungi - 10406; Plants - 28734; Viruses - 420; Other Eukaryotes - 17309 (source: NCBI BLink). & (gnl|cdd|35804 : 548.0) no description available & (gnl|cdd|29142 : 196.0) no description available & (q5qn75|m2k1_orysa : 99.8) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1164.0) & (original description: Putative zik1, Description = ZIK1 protein, PFAM = PF00069;PF12202)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold47596_11692-16096' '(at1g77720 : 239.0) Encodes a predicted protein kinase based on sequence similarity.; putative protein kinase 1 (PPK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: MAPK/ERK kinase kinase 3 (TAIR:AT4G08470.1); Has 102737 Blast hits to 99628 proteins in 3502 species: Archae - 97; Bacteria - 12996; Metazoa - 35733; Fungi - 11774; Plants - 22485; Viruses - 236; Other Eukaryotes - 19416 (source: NCBI BLink). & (gnl|cdd|35816 : 133.0) no description available & (reliability: 478.0) & (original description: Putative PPK1, Description = Serine/threonine-protein kinase mph1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold48427_4129-10229' '(at4g27800 : 490.0) Choroplast protein phosphatase TAP38/PPH1 is required for efficient dephosphorylation of the LHCII anthena and state transition from state 2 to state 1.; thylakoid-associated phosphatase 38 (TAP38); FUNCTIONS IN: phosphatase activity, protein serine/threonine phosphatase activity; INVOLVED IN: photosynthetic electron transport chain, photosystem stoichiometry adjustment, dephosphorylation; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G31860.1); Has 5546 Blast hits to 5534 proteins in 320 species: Archae - 4; Bacteria - 50; Metazoa - 1347; Fungi - 661; Plants - 2413; Viruses - 9; Other Eukaryotes - 1062 (source: NCBI BLink). & (gnl|cdd|29062 : 200.0) no description available & (gnl|cdd|35917 : 175.0) no description available & (reliability: 980.0) & (original description: Putative PPH1, Description = Protein phosphatase 2C 57, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold49710_1670-14794' '(at4g18950 : 570.0) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Integrin-linked protein kinase (InterPro:IPR016253), Ankyrin repeat-containing domain (InterPro:IPR020683), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G58760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 232.0) no description available & (gnl|cdd|87344 : 189.0) no description available & (q6x4a2|cipk1_orysa : 106.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1136.0) & (original description: Putative APK1, Description = Ankyrin-kinase protein, PFAM = PF07714;PF12796)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold50435_451-6834' '(at1g47380 : 682.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G68410.2); Has 5162 Blast hits to 5161 proteins in 415 species: Archae - 0; Bacteria - 290; Metazoa - 1152; Fungi - 442; Plants - 2230; Viruses - 7; Other Eukaryotes - 1041 (source: NCBI BLink). & (gnl|cdd|35917 : 177.0) no description available & (gnl|cdd|29062 : 170.0) no description available & (reliability: 1364.0) & (original description: Putative Os09g0459600, Description = Probable protein phosphatase 2C 69, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold52722_11113-14202' '(at3g23000 : 441.0) Encodes a serine/threonine protein kinase with similarities to CBL-interacting protein kinases, SNF1 and SOS2.; CBL-interacting protein kinase 7 (CIPK7); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to fructose stimulus, response to sucrose stimulus, response to glucose stimulus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 4 (TAIR:AT4G14580.1); Has 129268 Blast hits to 127250 proteins in 4353 species: Archae - 172; Bacteria - 15520; Metazoa - 47044; Fungi - 13122; Plants - 31560; Viruses - 528; Other Eukaryotes - 21322 (source: NCBI BLink). & (gnl|cdd|35803 : 326.0) no description available & (q6x4a2|cipk1_orysa : 308.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|29142 : 280.0) no description available & (reliability: 882.0) & (original description: Putative CIPK7, Description = CBL-interacting serine/threonine-protein kinase 7, PFAM = PF00069;PF03822)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold52957_11976-20225' '(at2g41140 : 868.0) Encodes CDPK-related kinase 1 (CRK1).; CDPK-related kinase 1 (CRK1); FUNCTIONS IN: calcium-dependent protein serine/threonine phosphatase activity, calmodulin-dependent protein kinase activity, kinase activity, calcium ion binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G56760.1); Has 116311 Blast hits to 114570 proteins in 3026 species: Archae - 154; Bacteria - 14640; Metazoa - 43033; Fungi - 12673; Plants - 24419; Viruses - 507; Other Eukaryotes - 20885 (source: NCBI BLink). & (p53681|crk_dauca : 757.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 353.0) no description available & (gnl|cdd|29142 : 265.0) no description available & (reliability: 1736.0) & (original description: Putative CRK1, Description = CDPK-related kinase 1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold53132_2420-13508' '(at4g10730 : 812.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: stem, cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G24100.1); Has 123193 Blast hits to 121433 proteins in 3863 species: Archae - 107; Bacteria - 14168; Metazoa - 45829; Fungi - 11619; Plants - 30923; Viruses - 608; Other Eukaryotes - 19939 (source: NCBI BLink). & (gnl|cdd|35802 : 482.0) no description available & (gnl|cdd|29142 : 257.0) no description available & (q5qn75|m2k1_orysa : 125.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1624.0) & (original description: Putative MAP4K4, Description = MAP kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold54953_1-13466' '(at4g35780 : 524.0) ACT-like protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Amino acid-binding ACT (InterPro:IPR002912), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ACT-like protein tyrosine kinase family protein (TAIR:AT2G17700.1); Has 132714 Blast hits to 130570 proteins in 5062 species: Archae - 147; Bacteria - 14500; Metazoa - 50865; Fungi - 12053; Plants - 33999; Viruses - 512; Other Eukaryotes - 20638 (source: NCBI BLink). & (gnl|cdd|35413 : 168.0) no description available & (gnl|cdd|87344 : 168.0) no description available & (q8lkz1|nork_pea : 90.5) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 1048.0) & (original description: Putative ACTK, Description = Serine/threonine-protein kinase HT1, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold55322_1-3751' '(at3g17850 : 206.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G48490.3); Has 127463 Blast hits to 124461 proteins in 4737 species: Archae - 199; Bacteria - 14974; Metazoa - 47504; Fungi - 13120; Plants - 28745; Viruses - 516; Other Eukaryotes - 22405 (source: NCBI BLink). & (gnl|cdd|35826 : 129.0) no description available & (reliability: 412.0) & (original description: Putative pkgA, Description = Serine/threonine protein kinase 15, PFAM = )' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold56423_116-11446' '(at3g17850 : 616.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G48490.3); Has 127463 Blast hits to 124461 proteins in 4737 species: Archae - 199; Bacteria - 14974; Metazoa - 47504; Fungi - 13120; Plants - 28745; Viruses - 516; Other Eukaryotes - 22405 (source: NCBI BLink). & (gnl|cdd|35826 : 338.0) no description available & (gnl|cdd|47550 : 234.0) no description available & (p15792|kpk1_phavu : 146.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1232.0) & (original description: Putative IRE, Description = Serine/threonine-protein kinase tricorner, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold56637_1-5474' '(at2g34740 : 329.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G15260.2). & (gnl|cdd|35917 : 217.0) no description available & (gnl|cdd|29062 : 208.0) no description available & (reliability: 658.0) & (original description: Putative MPC9, Description = Protein phosphatase 2C, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold56814_4251-12873' '(at3g16030 : 356.0) CALLUS EXPRESSION OF RBCS 101 (CES101); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT4G21390.1); Has 121576 Blast hits to 119500 proteins in 4422 species: Archae - 101; Bacteria - 13477; Metazoa - 44302; Fungi - 10440; Plants - 35232; Viruses - 450; Other Eukaryotes - 17574 (source: NCBI BLink). & (gnl|cdd|36401 : 314.0) no description available & (gnl|cdd|47913 : 231.0) no description available & (q8l4h4|nork_medtr : 207.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 712.0) & (original description: Putative Chrk1, Description = Receptor-like kinase CHRK1, PFAM = PF00704;PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold56851_6040-12252' '(at1g54610 : 713.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G05050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35820 : 659.0) no description available & (gnl|cdd|29142 : 247.0) no description available & (q05006|cdc22_medsa : 221.0) Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Medicago sativa (Alfalfa) & (reliability: 1306.0) & (original description: Putative crk1, Description = CRK1 protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold57063_1461-11702' '(at3g24715 : 519.0) Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: PB1 domain-containing protein tyrosine kinase (TAIR:AT1G04700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 312.0) no description available & (gnl|cdd|87344 : 257.0) no description available & (q8l4h4|nork_medtr : 104.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1030.0) & (original description: Putative STY2, Description = Serine/threonine-protein kinase CTR1, PFAM = PF00564;PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold57337_4874-11735' '(at3g06270 : 493.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases (TAIR:AT2G20050.1); Has 5674 Blast hits to 5652 proteins in 402 species: Archae - 6; Bacteria - 206; Metazoa - 1330; Fungi - 548; Plants - 2474; Viruses - 4; Other Eukaryotes - 1106 (source: NCBI BLink). & (gnl|cdd|35917 : 176.0) no description available & (gnl|cdd|29062 : 170.0) no description available & (reliability: 986.0) & (original description: Putative At3g06270, Description = Probable protein phosphatase 2C 35, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold57899_1112-6675' '(at4g33080 : 543.0) AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), Protein kinase-like domain (InterPro:IPR011009), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT2G19400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35825 : 536.0) no description available & (gnl|cdd|47550 : 237.0) no description available & (p15792|kpk1_phavu : 139.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1086.0) & (original description: Putative ndrB, Description = Serine/threonine-protein kinase CBK1, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold58133_7041-11501' '(at5g57630 : 374.0) CBL-interacting protein kinase; CBL-interacting protein kinase 21 (CIPK21); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 23 (TAIR:AT1G30270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 275.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 227.0) no description available & (gnl|cdd|29142 : 212.0) no description available & (reliability: 748.0) & (original description: Putative sos2, Description = Non-specific serine/threonine protein kinase, PFAM = PF03822;PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold58339_1684-10851' '(at2g37840 : 681.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, putative (InterPro:IPR020655), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G53930.2); Has 51534 Blast hits to 51036 proteins in 1321 species: Archae - 36; Bacteria - 3205; Metazoa - 22459; Fungi - 6825; Plants - 7556; Viruses - 105; Other Eukaryotes - 11348 (source: NCBI BLink). & (gnl|cdd|35815 : 340.0) no description available & (gnl|cdd|47550 : 282.0) no description available & (q75v57|sapk9_orysa : 147.0) Serine/threonine-protein kinase SAPK9 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 9) - Oryza sativa (Rice) & (reliability: 1362.0) & (original description: Putative ATG1b, Description = Serine/threonine-protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold58663_1-1598' '(at3g57740 : 103.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G57750.2); Has 31135 Blast hits to 30839 proteins in 1583 species: Archae - 4; Bacteria - 2835; Metazoa - 4267; Fungi - 840; Plants - 21255; Viruses - 28; Other Eukaryotes - 1906 (source: NCBI BLink). & (gnl|cdd|36401 : 88.2) no description available & (reliability: 206.0) & (original description: Putative PGSC0003DMG400011871, Description = Putative inactive serine/threonine-protein kinase-like, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold59157_8850-12158' '(at5g01820 : 479.0) Encodes a CBL-interacting serine/threonine protein kinase.; serine/threonine protein kinase 1 (SR1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SOS3-interacting protein 4 (TAIR:AT2G30360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35803 : 342.0) no description available & (q6x4a2|cipk1_orysa : 324.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|29142 : 289.0) no description available & (reliability: 958.0) & (original description: Putative CIPK14, Description = CBL-interacting serine/threonine-protein kinase 14, PFAM = PF03822;PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold60229_3910-11856' '(o04860|pp2a5_tobac : 667.0) Serine/threonine-protein phosphatase PP2A-5 catalytic subunit (EC 3.1.3.16) - Nicotiana tabacum (Common tobacco) & (at2g42500 : 620.0) Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].; protein phosphatase 2A-3 (PP2A-3); FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A-4 (TAIR:AT3G58500.1). & (gnl|cdd|35592 : 546.0) no description available & (gnl|cdd|29063 : 399.0) no description available & (reliability: 1240.0) & (original description: Putative NPP5, Description = Serine/threonine-protein phosphatase PP2A-5 catalytic subunit, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold60290_5915-10092' '(at3g63340 : 283.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein serine/threonine phosphatase activity, protein kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein phosphatase 2C-related (InterPro:IPR001932), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), Protein phosphatase 2C (InterPro:IPR015655); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G63320.1). & (gnl|cdd|35917 : 180.0) no description available & (gnl|cdd|29062 : 172.0) no description available & (reliability: 566.0) & (original description: Putative At3g63320, Description = Putative ovule protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold62064_3338-11337' '(at2g40860 : 542.0) protein kinase family protein / protein phosphatase 2C ( PP2C) family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein serine/threonine phosphatase activity, protein kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 2 (TAIR:AT4G31750.1); Has 131448 Blast hits to 130118 proteins in 4510 species: Archae - 166; Bacteria - 15372; Metazoa - 47633; Fungi - 11848; Plants - 35207; Viruses - 642; Other Eukaryotes - 20580 (source: NCBI BLink). & (gnl|cdd|47660 : 227.0) no description available & (gnl|cdd|35917 : 213.0) no description available & (reliability: 1084.0) & (original description: Putative PP2C, Description = Protein kinase and PP2C-like domain-containing protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold62960_2769-9693' '(at5g47080 : 382.0) Regulatory subunit beta of casein kinase II. purified CKB1 resulted in up 100-fold stimulation of casein kinase activity compared with the CKA1 activity alone. Forms a tetrameric complex with CKA1 (CKA1(2)CKB1(2)).; casein kinase II beta chain 1 (CKB1); CONTAINS InterPro DOMAIN/s: Casein kinase II, regulatory subunit, alpha-helical (InterPro:IPR016149), Casein kinase II, regulatory subunit, beta-sheet (InterPro:IPR016150), Casein kinase II, regulatory subunit (InterPro:IPR000704); BEST Arabidopsis thaliana protein match is: casein kinase II beta chain 2 (TAIR:AT4G17640.2). & (gnl|cdd|38302 : 355.0) no description available & (gnl|cdd|65042 : 305.0) no description available & (reliability: 764.0) & (original description: Putative ck2b, Description = CK II beta, PFAM = PF01214)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold63089_1-6293' '(at2g18030 : 347.0) Peptide methionine sulfoxide reductase family protein; FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity, oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: oxidation reduction, protein modification process, protein metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptide methionine sulphoxide reductase MsrA (InterPro:IPR002569); BEST Arabidopsis thaliana protein match is: peptidemethionine sulfoxide reductase 1 (TAIR:AT5G61640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36848 : 201.0) no description available & (gnl|cdd|80482 : 178.0) no description available & (p54152|msra_fraan : 105.0) Peptide methionine sulfoxide reductase (EC 1.8.4.11) (Protein-methionine-S-oxide reductase) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase) (Fruit-ripening protein E4) - Fragaria ananassa (Strawberry) & (reliability: 694.0) & (original description: Putative MSRA5, Description = Peptide methionine sulfoxide reductase A5, PFAM = PF01625)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold63445_2861-6880' '(at5g58950 : 617.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G46930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 291.0) no description available & (gnl|cdd|47549 : 247.0) no description available & (q02723|rkin1_secce : 97.1) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (reliability: 1234.0) & (original description: Putative PK6, Description = Protein kinase, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold63451_3318-7403' '(at1g67820 : 157.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G30020.1); Has 6733 Blast hits to 6560 proteins in 362 species: Archae - 6; Bacteria - 120; Metazoa - 1758; Fungi - 815; Plants - 2713; Viruses - 9; Other Eukaryotes - 1312 (source: NCBI BLink). & (gnl|cdd|47660 : 99.0) no description available & (gnl|cdd|35917 : 91.4) no description available & (reliability: 314.0) & (original description: Putative GM, Description = AtPP2C14, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold65958_1-5684' '(at1g72710 : 495.0) Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus.; casein kinase 1-like protein 2 (CKL2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase 1 (TAIR:AT4G26100.1); Has 69362 Blast hits to 63919 proteins in 2309 species: Archae - 34; Bacteria - 10202; Metazoa - 23661; Fungi - 6612; Plants - 12027; Viruses - 386; Other Eukaryotes - 16440 (source: NCBI BLink). & (gnl|cdd|36378 : 389.0) no description available & (gnl|cdd|29142 : 107.0) no description available & (reliability: 990.0) & (original description: Putative ckl5, Description = Casein kinase I-like protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold67948_1-2864' '(at1g63500 : 270.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G41260.1); Has 34543 Blast hits to 34010 proteins in 1386 species: Archae - 8; Bacteria - 2627; Metazoa - 7585; Fungi - 183; Plants - 22470; Viruses - 98; Other Eukaryotes - 1572 (source: NCBI BLink). & (reliability: 540.0) & (original description: Putative BSK2, Description = Putative serine/threonine-protein kinase, PFAM = )' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold68615_1724-7251' '(at1g62400 : 610.0) high leaf temperature 1 (HT1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G58950.1); Has 132835 Blast hits to 130849 proteins in 5233 species: Archae - 136; Bacteria - 14325; Metazoa - 51137; Fungi - 12092; Plants - 33829; Viruses - 555; Other Eukaryotes - 20761 (source: NCBI BLink). & (gnl|cdd|35413 : 299.0) no description available & (gnl|cdd|47549 : 242.0) no description available & (q8lpb4|pskr_dauca : 115.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1220.0) & (original description: Putative HT1, Description = Serine/threonine-protein kinase HT1, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold71341_426-8261' '(at4g23180 : 115.0) Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307); cysteine-rich RLK (RECEPTOR-like protein kinase) 10 (CRK10); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (TAIR:AT4G23160.1); Has 124145 Blast hits to 122467 proteins in 4564 species: Archae - 110; Bacteria - 14159; Metazoa - 45299; Fungi - 10862; Plants - 34986; Viruses - 473; Other Eukaryotes - 18256 (source: NCBI BLink). & (gnl|cdd|36401 : 91.3) no description available & (reliability: 222.0) & (original description: Putative SRK, Description = Serine/threonine-protein kinase, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold72292_1-8784' '(at4g15900 : 498.0) Mutations confer hypersensitivity to glucose and sucrose and augments sensitivity to cytokinin, ethylene, ABA and auxin. Encodes a nuclear WD40 protein that is imported into the nucleus. Essential for plant innate immunity. Interacts with MOS4 and AtCDC5. It is also predicted to have two DWD motifs. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase, and may affect the stability of AKIN10.; pleiotropic regulatory locus 1 (PRL1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G16650.1); Has 84704 Blast hits to 34179 proteins in 878 species: Archae - 64; Bacteria - 9610; Metazoa - 34201; Fungi - 18356; Plants - 10881; Viruses - 0; Other Eukaryotes - 11592 (source: NCBI BLink). & (gnl|cdd|35506 : 473.0) no description available & (gnl|cdd|29257 : 209.0) no description available & (p93107|pf20_chlre : 99.4) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 946.0) & (original description: Putative PLRG1, Description = Pleiotropic regulator 1-like protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold72405_1-6746' '(at5g51760 : 278.0) Encodes AHG1 (ABA-hypersensitive germination 1), a putative protein phosphatase 2C (PP2C). Expressed in seeds. AHG1 functions in seed development and germination.; ABA-hypersensitive germination 1 (AHG1); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: seed germination, response to abscisic acid stimulus, seed development; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: seed; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 3 (TAIR:AT2G29380.1); Has 6503 Blast hits to 6478 proteins in 370 species: Archae - 6; Bacteria - 133; Metazoa - 1626; Fungi - 786; Plants - 2672; Viruses - 7; Other Eukaryotes - 1273 (source: NCBI BLink). & (gnl|cdd|29062 : 223.0) no description available & (gnl|cdd|35917 : 218.0) no description available & (reliability: 556.0) & (original description: Putative AHG1, Description = Probable protein phosphatase 2C 75, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold72577_1641-8721' '(at5g59770 : 210.0) Protein-tyrosine phosphatase-like, PTPLA; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase-like, PTPLA (InterPro:IPR007482); BEST Arabidopsis thaliana protein match is: Protein-tyrosine phosphatase-like, PTPLA (TAIR:AT5G10480.2); Has 698 Blast hits to 698 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 336; Fungi - 172; Plants - 117; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|38397 : 142.0) no description available & (gnl|cdd|67978 : 122.0) no description available & (reliability: 420.0) & (original description: Putative PHS1, Description = 3-hydroxy acyl-CoA dehydratase, PFAM = PF04387)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold73562_2311-7773' '(at5g47750 : 748.0) D6 protein kinase like 2 (D6PKL2); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleolus, nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 1 (TAIR:AT4G26610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p47997|g11a_orysa : 706.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|35830 : 668.0) no description available & (gnl|cdd|47550 : 167.0) no description available & (reliability: 1496.0) & (original description: Putative Adi3, Description = Protein kinase G11A, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold73763_559-6802' '(at1g68410 : 638.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G09160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35917 : 173.0) no description available & (gnl|cdd|29062 : 170.0) no description available & (reliability: 1276.0) & (original description: Putative Os01g0513100, Description = Probable protein phosphatase 2C 3, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold76904_2314-6085' '(p54152|msra_fraan : 310.0) Peptide methionine sulfoxide reductase (EC 1.8.4.11) (Protein-methionine-S-oxide reductase) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase) (Fruit-ripening protein E4) - Fragaria ananassa (Strawberry) & (at5g61640 : 261.0) ubiquitous enzyme that repairs oxidatively damaged proteins; peptidemethionine sulfoxide reductase 1 (PMSR1); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity, oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: response to oxidative stress, protein modification process; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptide methionine sulphoxide reductase MsrA (InterPro:IPR002569); BEST Arabidopsis thaliana protein match is: peptidemethionine sulfoxide reductase 3 (TAIR:AT5G07470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36848 : 257.0) no description available & (gnl|cdd|80482 : 219.0) no description available & (reliability: 522.0) & (original description: Putative E4, Description = Peptide methionine sulfoxide reductase, PFAM = PF01625)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold77722_407-5825' '(at1g27070 : 268.0) 5'-AMP-activated protein kinase-related; BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase-related (TAIR:AT5G03420.1); Has 814 Blast hits to 789 proteins in 227 species: Archae - 3; Bacteria - 97; Metazoa - 231; Fungi - 191; Plants - 199; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|30346 : 96.5) no description available & (reliability: 536.0) & (original description: Putative SIP4, Description = SKIP interacting protein 4, PFAM = PF16561)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold78907_440-6174' '(at4g00720 : 712.0) Encodes ASKtheta, a group III Arabidopsis GSK3/shaggy-like kinase. Functions in the brassinosteroid signalling pathway.; shaggy-like protein kinase 32 (SK32); FUNCTIONS IN: kinase activity; INVOLVED IN: response to brassinosteroid stimulus; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: shaggy-like kinase 13 (TAIR:AT5G14640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o04160|ksgt_brana : 687.0) Shaggy-related protein kinase theta (EC 2.7.11.1) (ASK-theta) - Brassica napus (Rape) & (gnl|cdd|35877 : 563.0) no description available & (gnl|cdd|29142 : 235.0) no description available & (reliability: 1424.0) & (original description: Putative ASK8, Description = Shaggy-related protein kinase theta, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold79846_718-6641' '(at3g55270 : 669.0) MAP kinase phosphatase (MKP1); mitogen-activated protein kinase phosphatase 1 (MKP1); CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: MAPK phosphatase 2 (TAIR:AT3G06110.3); Has 4115 Blast hits to 4050 proteins in 297 species: Archae - 2; Bacteria - 48; Metazoa - 2335; Fungi - 439; Plants - 312; Viruses - 98; Other Eukaryotes - 881 (source: NCBI BLink). & (gnl|cdd|29029 : 167.0) no description available & (gnl|cdd|36928 : 142.0) no description available & (reliability: 1338.0) & (original description: Putative MKP1, Description = Protein-tyrosine-phosphatase MKP1, PFAM = PF00782)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold80470_13-5844' '(at4g03260 : 439.0) Outer arm dynein light chain 1 protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Outer arm dynein light chain 1 protein (TAIR:AT1G78230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35751 : 97.6) no description available & (reliability: 878.0) & (original description: Putative At1g78230, Description = Outer arm dynein light chain 1 protein, PFAM = PF13855)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold81612_2502-6844' '(at5g49470 : 296.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT1G67890.1). & (gnl|cdd|35413 : 187.0) no description available & (gnl|cdd|87344 : 151.0) no description available & (q8l4h4|nork_medtr : 91.3) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 592.0) & (original description: Putative CTR, Description = Serine/threonine-protein kinase CTR1, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold87506_716-5403' '(p15792|kpk1_phavu : 725.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|35830 : 657.0) no description available & (at3g27580 : 651.0) a member of a subfamily of Ser/Thr PKs in plants.; ATPK7; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 2 (TAIR:AT5G47750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47550 : 168.0) no description available & (reliability: 1302.0) & (original description: Putative Adi3, Description = Protein kinase G11A, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold87989_996-5750' '(at2g27210 : 369.0) BRI1 suppressor 1 (BSU1)-like 3 (BSL3); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, iron ion binding, phosphoprotein phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Metallophosphoesterase (InterPro:IPR004843), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 2 (TAIR:AT1G08420.2). & (q2qm47|bsl2_orysa : 337.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35600 : 165.0) no description available & (reliability: 728.0) & (original description: Putative BSL1, Description = Serine/threonine-protein phosphatase, PFAM = PF13418;PF13418)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold88861_1-5157' '(at2g25620 : 343.0) Encodes DBP1, a member of the DBP factors (DNA-binding protein phosphatases) featuring sequence-specific DNA-binding and protein phosphatase activity. DBP1 is involved in plant-potyvirus interactions. Loss-of-function of DBP1 renders resistance to potyviruses.; DNA-binding protein phosphatase 1 (DBP1); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: regulation of defense response to virus; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G33700.1); Has 7196 Blast hits to 7030 proteins in 671 species: Archae - 12; Bacteria - 774; Metazoa - 1729; Fungi - 719; Plants - 2627; Viruses - 7; Other Eukaryotes - 1328 (source: NCBI BLink). & (gnl|cdd|35917 : 218.0) no description available & (gnl|cdd|29062 : 209.0) no description available & (reliability: 686.0) & (original description: Putative DBP1, Description = DNA-binding protein phosphatase 2C, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold89372_74-3800' '(at5g51760 : 111.0) Encodes AHG1 (ABA-hypersensitive germination 1), a putative protein phosphatase 2C (PP2C). Expressed in seeds. AHG1 functions in seed development and germination.; ABA-hypersensitive germination 1 (AHG1); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: seed germination, response to abscisic acid stimulus, seed development; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: seed; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 3 (TAIR:AT2G29380.1); Has 6503 Blast hits to 6478 proteins in 370 species: Archae - 6; Bacteria - 133; Metazoa - 1626; Fungi - 786; Plants - 2672; Viruses - 7; Other Eukaryotes - 1273 (source: NCBI BLink). & (gnl|cdd|29062 : 85.8) no description available & (gnl|cdd|35917 : 84.4) no description available & (reliability: 222.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold89391_1310-5283' '(at1g32640 : 513.0) Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif. Its transcription is induced by dehydration stress and ABA treatment. Negative regulator of blue lightñmediated photomorphogenic growth and blue and far-red-lightñregulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression.; MYC2; FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 13 processes; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: Basic helix-loop-helix (bHLH) DNA-binding family protein (TAIR:AT4G17880.1); Has 4078 Blast hits to 3762 proteins in 672 species: Archae - 2; Bacteria - 2; Metazoa - 761; Fungi - 108; Plants - 3150; Viruses - 25; Other Eukaryotes - 30 (source: NCBI BLink). & (p13027|arrs_maize : 99.4) Anthocyanin regulatory R-S protein - Zea mays (Maize) & (reliability: 1026.0) & (original description: Putative myc2, Description = MYC2, PFAM = PF14215;PF00010)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold94297_1-3052' '(at3g57120 : 388.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (TAIR:AT1G51940.1); Has 39405 Blast hits to 37293 proteins in 1762 species: Archae - 14; Bacteria - 4560; Metazoa - 7143; Fungi - 1468; Plants - 21966; Viruses - 110; Other Eukaryotes - 4144 (source: NCBI BLink). & (gnl|cdd|36401 : 178.0) no description available & (gnl|cdd|87344 : 83.7) no description available & (o24585|cri4_maize : 80.1) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 776.0) & (original description: Putative At3g57120, Description = Protein kinase family protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.3scaffold101763_356-3823' '(p93340|gblp_nicpl : 624.0) Guanine nucleotide-binding protein subunit beta-like protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g18080 : 520.0) Encodes the Arabidopsis thaliana homolog of the tobacco WD-40 repeat ArcA gene.; ATARCA; FUNCTIONS IN: nucleotide binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosolic ribosome, chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B (TAIR:AT1G48630.1); Has 86693 Blast hits to 36128 proteins in 955 species: Archae - 98; Bacteria - 10140; Metazoa - 33986; Fungi - 19643; Plants - 11429; Viruses - 3; Other Eukaryotes - 11394 (source: NCBI BLink). & (gnl|cdd|35500 : 447.0) no description available & (gnl|cdd|29257 : 234.0) no description available & (reliability: 1038.0) & (original description: Putative ARCA, Description = Guanine nucleotide-binding protein subunit beta-like protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold56_430117-712226' '(at5g67080 : 249.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 19 (MAPKKK19); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, LP.06 six leaves visible, M germinated pollen stage, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 20 (TAIR:AT3G50310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35419 : 244.0) no description available & (gnl|cdd|47550 : 211.0) no description available & (p28583|cdpk_soybn : 100.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (reliability: 498.0) & (original description: Putative MAPKKK19, Description = Mitogen-activated protein kinase kinase kinase 19, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold77_565083-577310' '(at2g42810 : 800.0) Encodes a phytochrome-specific type 5 serine/threonine protein phosphatase. It dephosphorylates active Pfr-phytochromes. Controls light signal flux by enhancing phytochrome stability and affinity for a signal transducer. The gene is alternately spliced. This variant is an integral membrane protein localized to the ER and nuclear envelope.; protein phosphatase 5.2 (PP5.2); FUNCTIONS IN: protein binding, phosphoprotein phosphatase activity, protein serine/threonine phosphatase activity; INVOLVED IN: response to cadmium ion, nucleocytoplasmic transport, red or far-red light signaling pathway; LOCATED IN: nuclear envelope, integral to endoplasmic reticulum membrane, nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Metallophosphoesterase (InterPro:IPR004843), Protein phosphatase 5 (InterPro:IPR011236), Tetratricopeptide-like helical (InterPro:IPR011990), Serine/threonine phosphatase, PPP5 (InterPro:IPR013235), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT5G27840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35597 : 604.0) no description available & (gnl|cdd|29063 : 334.0) no description available & (p48489|pp1_orysa : 228.0) Serine/threonine-protein phosphatase PP1 (EC 3.1.3.16) - Oryza sativa (Rice) & (reliability: 1600.0) & (original description: Putative Ppp5c, Description = Serine/threonine-protein phosphatase 5, PFAM = PF13432;PF00149;PF08321)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold101_400045-407411' '(at4g03260 : 455.0) Outer arm dynein light chain 1 protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Outer arm dynein light chain 1 protein (TAIR:AT1G78230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35751 : 96.1) no description available & (reliability: 910.0) & (original description: Putative At4g03260, Description = At4g03260, PFAM = PF13855)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold220_780004-784719' '(at3g57120 : 406.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (TAIR:AT1G51940.1); Has 39405 Blast hits to 37293 proteins in 1762 species: Archae - 14; Bacteria - 4560; Metazoa - 7143; Fungi - 1468; Plants - 21966; Viruses - 110; Other Eukaryotes - 4144 (source: NCBI BLink). & (gnl|cdd|36401 : 182.0) no description available & (o24585|cri4_maize : 95.5) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 89.4) no description available & (reliability: 812.0) & (original description: Putative BnaCnng47490D, Description = BnaCnng47490D protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold243_278623-282370' '(p93340|gblp_nicpl : 551.0) Guanine nucleotide-binding protein subunit beta-like protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g18080 : 455.0) Encodes the Arabidopsis thaliana homolog of the tobacco WD-40 repeat ArcA gene.; ATARCA; FUNCTIONS IN: nucleotide binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosolic ribosome, chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B (TAIR:AT1G48630.1); Has 86693 Blast hits to 36128 proteins in 955 species: Archae - 98; Bacteria - 10140; Metazoa - 33986; Fungi - 19643; Plants - 11429; Viruses - 3; Other Eukaryotes - 11394 (source: NCBI BLink). & (gnl|cdd|35500 : 387.0) no description available & (gnl|cdd|29257 : 192.0) no description available & (reliability: 908.0) & (original description: Putative RACK1, Description = Receptor of-activated protein C kinase 1, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold246_122155-143582' '(at5g59740 : 535.0) UDP-N-acetylglucosamine (UAA) transporter family; FUNCTIONS IN: galactose transmembrane transporter activity; INVOLVED IN: transmembrane transport; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: UDP-galactose transporter 5 (TAIR:AT3G46180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36794 : 372.0) no description available & (gnl|cdd|71878 : 257.0) no description available & (reliability: 1070.0) & (original description: Putative At5g59740, Description = UDP-galactose/UDP-glucose transporter 5B, PFAM = PF08449)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold273_636132-655127' '(at5g28850 : 539.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G28900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37773 : 409.0) no description available & (reliability: 1074.0) & (original description: Putative P2R3B, Description = Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha, PFAM = PF13499)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold292_34169-39162' '(at4g03230 : 383.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G11340.1); Has 120947 Blast hits to 117758 proteins in 4568 species: Archae - 89; Bacteria - 13334; Metazoa - 43594; Fungi - 9240; Plants - 36995; Viruses - 386; Other Eukaryotes - 17309 (source: NCBI BLink). & (gnl|cdd|36401 : 297.0) no description available & (q8lpb4|pskr_dauca : 188.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 169.0) no description available & (reliability: 766.0) & (original description: Putative rlk1, Description = Serine/threonine-protein kinase, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold312_195180-205026' '(at4g10730 : 778.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: stem, cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G24100.1); Has 123193 Blast hits to 121433 proteins in 3863 species: Archae - 107; Bacteria - 14168; Metazoa - 45829; Fungi - 11619; Plants - 30923; Viruses - 608; Other Eukaryotes - 19939 (source: NCBI BLink). & (gnl|cdd|35802 : 484.0) no description available & (gnl|cdd|29142 : 255.0) no description available & (q5qn75|m2k1_orysa : 125.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1556.0) & (original description: Putative MAP4K4, Description = MAP kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold326_489810-496183' '(at5g19130 : 701.0) GPI transamidase component family protein / Gaa1-like family protein; FUNCTIONS IN: GPI-anchor transamidase activity; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosylphosphatidylinositol:protein transamidase complex, GAA1 component (InterPro:IPR017063), Gaa1-like, GPI transamidase component (InterPro:IPR007246); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38774 : 378.0) no description available & (gnl|cdd|67719 : 174.0) no description available & (reliability: 1402.0) & (original description: Putative BnaA10g15910D, Description = BnaA10g15910D protein, PFAM = PF04114)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold334_819172-826040' '(at3g48260 : 572.0) Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases.; with no lysine (K) kinase 3 (WNK3); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 2 (TAIR:AT3G22420.1); Has 106620 Blast hits to 105555 proteins in 3648 species: Archae - 79; Bacteria - 10632; Metazoa - 39040; Fungi - 10406; Plants - 28734; Viruses - 420; Other Eukaryotes - 17309 (source: NCBI BLink). & (gnl|cdd|35804 : 540.0) no description available & (gnl|cdd|29142 : 180.0) no description available & (q5qn75|m2k1_orysa : 85.9) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1144.0) & (original description: Putative zik1, Description = ZIK1 protein, PFAM = PF00069;PF12202)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold410_537967-546201' '(at3g16030 : 638.0) CALLUS EXPRESSION OF RBCS 101 (CES101); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT4G21390.1); Has 121576 Blast hits to 119500 proteins in 4422 species: Archae - 101; Bacteria - 13477; Metazoa - 44302; Fungi - 10440; Plants - 35232; Viruses - 450; Other Eukaryotes - 17574 (source: NCBI BLink). & (gnl|cdd|36401 : 336.0) no description available & (q8l4h4|nork_medtr : 204.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 174.0) no description available & (reliability: 1276.0) & (original description: Putative CES101, Description = G-type lectin S-receptor-like serine/threonine-protein kinase CES101, PFAM = PF01453;PF08276;PF07714;PF11883)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold424_337175-348462' '(at2g40860 : 850.0) protein kinase family protein / protein phosphatase 2C ( PP2C) family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein serine/threonine phosphatase activity, protein kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 2 (TAIR:AT4G31750.1); Has 131448 Blast hits to 130118 proteins in 4510 species: Archae - 166; Bacteria - 15372; Metazoa - 47633; Fungi - 11848; Plants - 35207; Viruses - 642; Other Eukaryotes - 20580 (source: NCBI BLink). & (gnl|cdd|47660 : 229.0) no description available & (gnl|cdd|35917 : 213.0) no description available & (p93194|rpk1_iponi : 91.7) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1700.0) & (original description: Putative At2g40860/At2g40870, Description = Protein kinase and PP2C-like domain-containing protein, PFAM = PF00069;PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold443_607245-614363' '(at4g33950 : 582.0) Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network.; OPEN STOMATA 1 (OST1); FUNCTIONS IN: calcium-dependent protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 (TAIR:AT5G66880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q75h77|sapka_orysa : 576.0) Serine/threonine-protein kinase SAPK10 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 10) - Oryza sativa (Rice) & (gnl|cdd|35803 : 300.0) no description available & (gnl|cdd|29142 : 263.0) no description available & (reliability: 1152.0) & (original description: Putative SRK2I, Description = Serine/threonine-protein kinase SRK2I, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold462_210305-219874' '(at1g63500 : 807.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G41260.1); Has 34543 Blast hits to 34010 proteins in 1386 species: Archae - 8; Bacteria - 2627; Metazoa - 7585; Fungi - 183; Plants - 22470; Viruses - 98; Other Eukaryotes - 1572 (source: NCBI BLink). & (gnl|cdd|36401 : 200.0) no description available & (o24585|cri4_maize : 104.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|88314 : 104.0) no description available & (reliability: 1614.0) & (original description: Putative At5g41260, Description = Probable serine/threonine-protein kinase At5g41260, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold568_694276-701273' '(at1g67820 : 318.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G30020.1); Has 6733 Blast hits to 6560 proteins in 362 species: Archae - 6; Bacteria - 120; Metazoa - 1758; Fungi - 815; Plants - 2713; Viruses - 9; Other Eukaryotes - 1312 (source: NCBI BLink). & (gnl|cdd|29062 : 204.0) no description available & (gnl|cdd|35917 : 199.0) no description available & (reliability: 636.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold598_291636-309529' '(at2g42390 : 189.0) protein kinase C substrate, heavy chain-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: calmodulin-binding protein (TAIR:AT5G56360.1); Has 584 Blast hits to 561 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 322; Fungi - 119; Plants - 62; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|37608 : 147.0) no description available & (reliability: 378.0) & (original description: Putative PSL4, Description = Glucosidase 2 subunit beta, PFAM = PF12999)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold644_574918-581936' '(at3g02750 : 562.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G36250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35917 : 210.0) no description available & (gnl|cdd|29062 : 192.0) no description available & (reliability: 1124.0) & (original description: Putative F9H3, Description = Phosphatase 2C family protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold651_15171-32358' '(at1g72710 : 630.0) Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus.; casein kinase 1-like protein 2 (CKL2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase 1 (TAIR:AT4G26100.1); Has 69362 Blast hits to 63919 proteins in 2309 species: Archae - 34; Bacteria - 10202; Metazoa - 23661; Fungi - 6612; Plants - 12027; Viruses - 386; Other Eukaryotes - 16440 (source: NCBI BLink). & (gnl|cdd|36378 : 469.0) no description available & (gnl|cdd|29142 : 160.0) no description available & (reliability: 1260.0) & (original description: Putative ckl5, Description = Casein kinase I isoform delta-like protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold696_602974-606864' '(at5g60900 : 341.0) Encodes a receptor-like protein kinase.; receptor-like protein kinase 1 (RLK1); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: lectin protein kinase family protein (TAIR:AT1G34300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 295.0) no description available & (p17801|kpro_maize : 192.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 141.0) no description available & (reliability: 682.0) & (original description: Putative glysoja_022454, Description = Serine/threonine-protein kinase, PFAM = PF00954;PF07714;PF01453)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold711_375143-384597' '(gnl|cdd|35820 : 305.0) no description available & (at1g09600 : 270.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G57700.1); Has 123498 Blast hits to 122030 proteins in 4353 species: Archae - 93; Bacteria - 13546; Metazoa - 45885; Fungi - 12568; Plants - 30937; Viruses - 467; Other Eukaryotes - 20002 (source: NCBI BLink). & (gnl|cdd|29142 : 161.0) no description available & (q38772|cdc2a_antma : 157.0) Cell division control protein 2 homolog A (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (reliability: 540.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold819_504759-510496' '(at1g47380 : 640.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G68410.2); Has 5162 Blast hits to 5161 proteins in 415 species: Archae - 0; Bacteria - 290; Metazoa - 1152; Fungi - 442; Plants - 2230; Viruses - 7; Other Eukaryotes - 1041 (source: NCBI BLink). & (gnl|cdd|29062 : 149.0) no description available & (gnl|cdd|35917 : 144.0) no description available & (reliability: 1280.0) & (original description: Putative At1g47380, Description = Probable protein phosphatase 2C 12, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold845_10144-30843' '(at5g49470 : 731.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT1G67890.1). & (gnl|cdd|35413 : 330.0) no description available & (gnl|cdd|87344 : 257.0) no description available & (q8l4h4|nork_medtr : 116.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1462.0) & (original description: Putative CTR1, Description = Serine/threonine-protein kinase CTR1, PFAM = PF00989;PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold867_550838-555613' '(at3g08760 : 515.0) Encodes an osmotic stress-inducible kinase that functions as a negative regulator of osmotic stress signaling in plants.; ATSIK; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G15080.1); Has 42849 Blast hits to 42385 proteins in 1619 species: Archae - 20; Bacteria - 2695; Metazoa - 11858; Fungi - 1356; Plants - 23776; Viruses - 143; Other Eukaryotes - 3001 (source: NCBI BLink). & (gnl|cdd|36401 : 243.0) no description available & (q8lpb4|pskr_dauca : 139.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 106.0) no description available & (reliability: 1030.0) & (original description: Putative Os01g0822200, Description = Os01g0822200 protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold889_157853-160442' '(q75lr7|sapk1_orysa : 213.0) Serine/threonine-protein kinase SAPK1 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 1) - Oryza sativa (Rice) & (at1g10940 : 211.0) Encodes a plant protein kinase similar to the calcium/calmodulin-dependent protein kinase subfamily and the SNF1 kinase subfamily (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Kinase activity of its homolog in tobacco is induced by hyperosmotic condition within 1 minute.; Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: SNF1-related protein kinase 2.10 (TAIR:AT1G60940.2). & (gnl|cdd|35803 : 135.0) no description available & (gnl|cdd|47550 : 128.0) no description available & (reliability: 422.0) & (original description: Putative pk5, Description = Serine/threonine-protein kinase SAPK7, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold901_6149-25281' '(at3g15220 : 699.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytoplasm, spindle; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G53165.2); Has 133641 Blast hits to 131568 proteins in 4406 species: Archae - 196; Bacteria - 15456; Metazoa - 49688; Fungi - 12950; Plants - 32844; Viruses - 666; Other Eukaryotes - 21841 (source: NCBI BLink). & (gnl|cdd|35422 : 468.0) no description available & (gnl|cdd|29142 : 299.0) no description available & (q5qn75|m2k1_orysa : 148.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1336.0) & (original description: Putative stk25a, Description = Zgc:92836, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold929_758221-767865' '(at5g46570 : 822.0) Encodes BR-signaling kinase 2 (BSK2), one of the three homologous BR-signaling kinases (BSK1, AT4G35230; BSK2, AT5G46570; BSK3, AT4G00710). Mediates signal transduction from receptor kinase BRI1 by functioning as the substrate of BRI1. Plasma membrane localized.; BR-signaling kinase 2 (BSK2); FUNCTIONS IN: binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: brassinosteroid mediated signaling pathway, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G59010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 218.0) no description available & (p17801|kpro_maize : 119.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 112.0) no description available & (reliability: 1644.0) & (original description: Putative At4g35230, Description = Probable serine/threonine-protein kinase At4g35230, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold972_12-287658' '(at2g27210 : 1566.0) BRI1 suppressor 1 (BSU1)-like 3 (BSL3); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, iron ion binding, phosphoprotein phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Metallophosphoesterase (InterPro:IPR004843), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 2 (TAIR:AT1G08420.2). & (q2qm47|bsl2_orysa : 1503.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35595 : 369.0) no description available & (gnl|cdd|47495 : 311.0) no description available & (reliability: 3104.0) & (original description: Putative BSL3, Description = Serine/threonine-protein phosphatase BSL3, PFAM = PF13418;PF13418;PF07646;PF00149)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold1092_185464-191691' '(gnl|cdd|35830 : 517.0) no description available & (at3g44610 : 464.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 2 (TAIR:AT5G47750.1); Has 99456 Blast hits to 74546 proteins in 2417 species: Archae - 35; Bacteria - 11117; Metazoa - 41933; Fungi - 12113; Plants - 14694; Viruses - 280; Other Eukaryotes - 19284 (source: NCBI BLink). & (p47997|g11a_orysa : 423.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 146.0) no description available & (reliability: 928.0) & (original description: Putative At3g44610, Description = At3g44610, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold1120_54357-62553' '(at5g53340 : 408.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G32120.1); Has 782 Blast hits to 773 proteins in 80 species: Archae - 0; Bacteria - 0; Metazoa - 225; Fungi - 0; Plants - 529; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|37499 : 301.0) no description available & (gnl|cdd|85659 : 109.0) no description available & (reliability: 816.0) & (original description: Putative HPGT2, Description = Hexosyltransferase, PFAM = PF01762)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold1120_55376-62840' '(at5g53340 : 422.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G32120.1); Has 782 Blast hits to 773 proteins in 80 species: Archae - 0; Bacteria - 0; Metazoa - 225; Fungi - 0; Plants - 529; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|37499 : 298.0) no description available & (gnl|cdd|85659 : 108.0) no description available & (reliability: 844.0) & (original description: Putative HPTG1, Description = Hydroxyproline O-galactosyltransferase HPGT1, PFAM = PF13334;PF01762)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold1172_447245-471710' '(at3g17850 : 904.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G48490.3); Has 127463 Blast hits to 124461 proteins in 4737 species: Archae - 199; Bacteria - 14974; Metazoa - 47504; Fungi - 13120; Plants - 28745; Viruses - 516; Other Eukaryotes - 22405 (source: NCBI BLink). & (gnl|cdd|35826 : 272.0) no description available & (gnl|cdd|29142 : 112.0) no description available & (reliability: 1808.0) & (original description: Putative Gw, Description = Serine/threonine protein kinase 15, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold1199_201914-216933' '(at4g18950 : 228.0) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Integrin-linked protein kinase (InterPro:IPR016253), Ankyrin repeat-containing domain (InterPro:IPR020683), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G58760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 134.0) no description available & (gnl|cdd|87344 : 114.0) no description available & (reliability: 448.0) & (original description: Putative PGSC0003DMG401030595, Description = Integrin-linked protein kinase family, PFAM = PF13857;PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold1301_219067-232316' '(at3g24715 : 521.0) Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: PB1 domain-containing protein tyrosine kinase (TAIR:AT1G04700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 315.0) no description available & (gnl|cdd|87344 : 262.0) no description available & (q8l4h4|nork_medtr : 103.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1024.0) & (original description: Putative STY2, Description = Serine/threonine-protein kinase CTR1, PFAM = PF07714;PF00564)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold1375_136487-157319' '(at2g40730 : 1025.0) Protein kinase family protein with ARM repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-like helical (InterPro:IPR011989), Serine/threonine-protein kinase domain (InterPro:IPR002290), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G71410.1); Has 4566 Blast hits to 2083 proteins in 348 species: Archae - 0; Bacteria - 278; Metazoa - 876; Fungi - 585; Plants - 192; Viruses - 19; Other Eukaryotes - 2616 (source: NCBI BLink). & (gnl|cdd|36457 : 509.0) no description available & (reliability: 2050.0) & (original description: Putative NTKL, Description = NTKL, PFAM = )' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold1465_30999-43762' '(at1g54510 : 639.0) Encodes AtNEK1, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.; NIMA-related serine/threonine kinase 1 (NEK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NIMA-related kinase 2 (TAIR:AT3G04810.2). & (gnl|cdd|35809 : 403.0) no description available & (gnl|cdd|47550 : 248.0) no description available & (q5qn75|m2k1_orysa : 116.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1278.0) & (original description: Putative NEK2, Description = Serine/threonine-protein kinase Nek2, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold1495_169456-179845' '(at1g34750 : 424.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: phytochrome-associated protein phosphatase type 2C (TAIR:AT1G22280.1); Has 7616 Blast hits to 7609 proteins in 922 species: Archae - 14; Bacteria - 1457; Metazoa - 1483; Fungi - 777; Plants - 2623; Viruses - 11; Other Eukaryotes - 1251 (source: NCBI BLink). & (gnl|cdd|35917 : 246.0) no description available & (gnl|cdd|29062 : 235.0) no description available & (reliability: 848.0) & (original description: Putative At1g34750, Description = Probable protein phosphatase 2C 10, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold1523_376034-383363' '(at4g33500 : 231.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, phosphoprotein phosphatase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Sporulation stage II, protein E C-terminal (InterPro:IPR010822); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G16580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36593 : 201.0) no description available & (reliability: 462.0) & (original description: Putative gpm564, Description = Protein phosphatase 2C (PP2C)-like protein, PFAM = PF07228)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold1574_70433-76676' '(at1g68410 : 630.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G09160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35917 : 171.0) no description available & (gnl|cdd|29062 : 170.0) no description available & (reliability: 1260.0) & (original description: Putative At1g68410, Description = Probable protein phosphatase 2C 15, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold1583_9815-17869' '(at3g09970 : 417.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT3G09960.1); Has 1009 Blast hits to 1009 proteins in 371 species: Archae - 12; Bacteria - 594; Metazoa - 24; Fungi - 11; Plants - 146; Viruses - 12; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|35595 : 85.0) no description available & (reliability: 834.0) & (original description: Putative Sb06g015405, Description = Putative uncharacterized protein Sb06g015405, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold1597_237181-242211' '(at5g08160 : 561.0) Encodes a serine/threonine protein kinase.; serine/threonine protein kinase 3 (PK3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G32850.2); Has 37972 Blast hits to 37793 proteins in 1677 species: Archae - 67; Bacteria - 5765; Metazoa - 14817; Fungi - 4512; Plants - 5796; Viruses - 46; Other Eukaryotes - 6969 (source: NCBI BLink). & (gnl|cdd|37556 : 362.0) no description available & (gnl|cdd|29142 : 112.0) no description available & (reliability: 1122.0) & (original description: Putative PK1, Description = Serine/threonine protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold1671_208950-212245' '(at5g57020 : 739.0) Arabidopsis thaliana myristoyl-CoA:protein N-myristoyltransferase.; myristoyl-CoA:protein N-myristoyltransferase (NMT1); CONTAINS InterPro DOMAIN/s: Myristoyl-CoA:protein N-myristoyltransferase (InterPro:IPR000903), Myristoyl-CoA:protein N-myristoyltransferase, conserved site (InterPro:IPR022678), Myristoyl-CoA:protein N-myristoyltransferase, N-terminal (InterPro:IPR022676), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Myristoyl-CoA:protein N-myristoyltransferase, C-terminal (InterPro:IPR022677); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G44175.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37990 : 610.0) no description available & (gnl|cdd|34695 : 416.0) no description available & (reliability: 1478.0) & (original description: Putative NMT1, Description = Glycylpeptide N-tetradecanoyltransferase 1, PFAM = PF01233;PF02799)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold1677_204233-207902' '(gnl|cdd|36401 : 226.0) no description available & (at3g57750 : 221.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G57710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8lkz1|nork_pea : 104.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|84488 : 82.2) no description available & (reliability: 442.0) & (original description: Putative ZED1, Description = Non-functional pseudokinase ZED1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold1704_69787-73883' '(at2g30020 : 358.0) Encodes AP2C1. Belongs to the clade B of the PP2C-superfamily. Acts as a MAPK phosphatase that negatively regulates MPK4 and MPK6.; Protein phosphatase 2C family protein; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G07160.1); Has 6969 Blast hits to 6779 proteins in 496 species: Archae - 2; Bacteria - 405; Metazoa - 1770; Fungi - 794; Plants - 2680; Viruses - 9; Other Eukaryotes - 1309 (source: NCBI BLink). & (gnl|cdd|35917 : 255.0) no description available & (gnl|cdd|29062 : 246.0) no description available & (reliability: 716.0) & (original description: Putative At2g30020, Description = Probable protein phosphatase 2C 25, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold1743_266980-271492' '(at2g32850 : 516.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: serine/threonine protein kinase 3 (TAIR:AT5G08160.1); Has 91647 Blast hits to 90290 proteins in 2701 species: Archae - 81; Bacteria - 10784; Metazoa - 33910; Fungi - 10357; Plants - 19846; Viruses - 210; Other Eukaryotes - 16459 (source: NCBI BLink). & (gnl|cdd|37200 : 361.0) no description available & (gnl|cdd|29142 : 172.0) no description available & (reliability: 1032.0) & (original description: Putative v1g167919, Description = Predicted protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold1781_12712-27394' '(at1g45160 : 768.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G17850.1); Has 126537 Blast hits to 124799 proteins in 4593 species: Archae - 166; Bacteria - 15103; Metazoa - 47179; Fungi - 12961; Plants - 29525; Viruses - 530; Other Eukaryotes - 21073 (source: NCBI BLink). & (gnl|cdd|35826 : 503.0) no description available & (gnl|cdd|29142 : 300.0) no description available & (p15792|kpk1_phavu : 189.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1536.0) & (original description: Putative stpk15, Description = Serine/threonine protein kinase 15, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold1949_233585-300586' '(at4g27290 : 128.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor kinase 3 (TAIR:AT4G21380.1); Has 125077 Blast hits to 123040 proteins in 4681 species: Archae - 101; Bacteria - 14188; Metazoa - 45583; Fungi - 10059; Plants - 36201; Viruses - 449; Other Eukaryotes - 18496 (source: NCBI BLink). & (gnl|cdd|36401 : 91.3) no description available & (reliability: 244.0) & (original description: Putative SRK, Description = Serine/threonine-protein kinase, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold2076_321739-327354' '(at1g03470 : 110.0) Kinase interacting (KIP1-like) family protein; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT2G47920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|71206 : 93.4) no description available & (reliability: 220.0) & (original description: Putative NET3A, Description = Protein NETWORKED 3A, PFAM = PF07765)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold2085_288260-297231' '(at1g24510 : 985.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: protein binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), T-complex protein 1, epsilon subunit (InterPro:IPR012718), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G18190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p54411|tcpe2_avesa : 956.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (gnl|cdd|48156 : 955.0) no description available & (gnl|cdd|35578 : 469.0) no description available & (reliability: 1970.0) & (original description: Putative CCT5, Description = T-complex protein 1 subunit epsilon, PFAM = PF00118)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold2161_184911-198246' '(at1g17720 : 781.0) type 2A protein serine/threonine phosphatase 55 kDa B; ATB BETA; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Protein phosphatase 2A, regulatory subunit PR55 (InterPro:IPR000009), Protein phosphatase 2A, regulatory subunit PR55, conserved site (InterPro:IPR018067), WD40 repeat, conserved site (InterPro:IPR019775), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform (TAIR:AT1G51690.3); Has 1042 Blast hits to 998 proteins in 278 species: Archae - 0; Bacteria - 71; Metazoa - 509; Fungi - 214; Plants - 122; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (q5z8z7|2aba_orysa : 752.0) Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform (PP2A, subunit B, alpha isoform) - Oryza sativa (Rice) & (gnl|cdd|36568 : 602.0) no description available & (gnl|cdd|34770 : 437.0) no description available & (reliability: 1562.0) & (original description: Putative PP2AB2, Description = Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform, PFAM = )' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold2164_236155-250229' '(at1g29370 : 388.0) Kinase-related protein of unknown function (DUF1296); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1296 (InterPro:IPR009719); BEST Arabidopsis thaliana protein match is: Kinase-related protein of unknown function (DUF1296) (TAIR:AT1G29350.1); Has 14234 Blast hits to 8102 proteins in 480 species: Archae - 0; Bacteria - 599; Metazoa - 5712; Fungi - 1715; Plants - 1064; Viruses - 60; Other Eukaryotes - 5084 (source: NCBI BLink). & (gnl|cdd|70439 : 101.0) no description available & (reliability: 776.0) & (original description: Putative At1g29350, Description = Kinase-related family protein, PFAM = PF06972)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold2210_22938-26593' '(at3g51370 : 377.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), Protein phosphatase 2C (InterPro:IPR015655); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35919 : 263.0) no description available & (gnl|cdd|47660 : 103.0) no description available & (reliability: 754.0) & (original description: Putative pp2C2, Description = Serine/threonine phosphatase family, 2C domain protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold2224_179533-234553' '(at5g35370 : 119.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-2 5 (TAIR:AT4G32300.1); Has 120687 Blast hits to 119102 proteins in 4782 species: Archae - 112; Bacteria - 13256; Metazoa - 44443; Fungi - 10300; Plants - 34517; Viruses - 382; Other Eukaryotes - 17677 (source: NCBI BLink). & (q39688|ep1g_dauca : 100.0) Epidermis-specific secreted glycoprotein EP1 precursor (52/54 kDa medium protein) - Daucus carota (Carrot) & (gnl|cdd|85464 : 89.6) no description available & (reliability: 238.0) & (original description: Putative BLP1, Description = Serine/threonine-protein kinase, PFAM = PF01453;PF00954)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold2320_223438-246958' '(at5g35980 : 932.0) yeast YAK1-related gene 1 (YAK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G17750.1); Has 91682 Blast hits to 90157 proteins in 2771 species: Archae - 99; Bacteria - 7981; Metazoa - 36897; Fungi - 11192; Plants - 18283; Viruses - 359; Other Eukaryotes - 16871 (source: NCBI BLink). & (gnl|cdd|35886 : 437.0) no description available & (gnl|cdd|29142 : 207.0) no description available & (q40517|ntf3_tobac : 116.0) Mitogen-activated protein kinase homolog NTF3 (EC 2.7.11.24) (P43) - Nicotiana tabacum (Common tobacco) & (reliability: 1864.0) & (original description: Putative YAK1, Description = At5g35980, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold2417_8128-23065' '(gnl|cdd|85563 : 687.0) no description available & (gnl|cdd|37296 : 641.0) no description available & (at3g09880 : 633.0) Encodes B' regulatory subunit of PP2A (AtB'beta).; ATB' BETA; FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: protein phosphatase type 2A complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT5G03470.1); Has 1186 Blast hits to 1156 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 571; Fungi - 167; Plants - 302; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink). & (reliability: 1266.0) & (original description: Putative B'BETA, Description = Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform, PFAM = PF01603)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold2537_300766-310322' '(at1g72710 : 617.0) Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus.; casein kinase 1-like protein 2 (CKL2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase 1 (TAIR:AT4G26100.1); Has 69362 Blast hits to 63919 proteins in 2309 species: Archae - 34; Bacteria - 10202; Metazoa - 23661; Fungi - 6612; Plants - 12027; Viruses - 386; Other Eukaryotes - 16440 (source: NCBI BLink). & (gnl|cdd|36378 : 491.0) no description available & (gnl|cdd|29142 : 157.0) no description available & (reliability: 1234.0) & (original description: Putative CK1, Description = Casein kinase 1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold2604_238616-246140' '(at4g32300 : 310.0) S-domain-2 5 (SD2-5); FUNCTIONS IN: carbohydrate binding, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid autophosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT5G35370.1); Has 119450 Blast hits to 117822 proteins in 4317 species: Archae - 101; Bacteria - 12813; Metazoa - 43689; Fungi - 10139; Plants - 34770; Viruses - 395; Other Eukaryotes - 17543 (source: NCBI BLink). & (gnl|cdd|36401 : 310.0) no description available & (p17801|kpro_maize : 283.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 183.0) no description available & (reliability: 620.0) & (original description: Putative RLK1, Description = Serine/threonine-protein kinase, PFAM = PF00069;PF08276;PF01453)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold2619_258672-269789' '(q40518|msk1_tobac : 782.0) Shaggy-related protein kinase NtK-1 (EC 2.7.11.1) - Nicotiana tabacum (Common tobacco) & (at5g26751 : 753.0) encodes a SHAGGY-related kinase involved in meristem organization.; shaggy-related kinase 11 (SK 11); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: meristem structural organization, phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: inflorescence meristem, whole plant, cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G05840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35877 : 572.0) no description available & (gnl|cdd|29142 : 230.0) no description available & (reliability: 1506.0) & (original description: Putative ASK1, Description = Shaggy-related protein kinase alpha, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold2626_4617-11661' '(q53n72|mpk15_orysa : 611.0) Mitogen-activated protein kinase 15 (EC 2.7.11.24) (MAP kinase 15) - Oryza sativa (Rice) & (at1g73670 : 609.0) member of MAP Kinase; MAP kinase 15 (MPK15); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18150.3); Has 118424 Blast hits to 117259 proteins in 3821 species: Archae - 110; Bacteria - 13457; Metazoa - 43793; Fungi - 12258; Plants - 28693; Viruses - 571; Other Eukaryotes - 19542 (source: NCBI BLink). & (gnl|cdd|35879 : 456.0) no description available & (gnl|cdd|29142 : 253.0) no description available & (reliability: 1186.0) & (original description: Putative mpk6, Description = Mitogen-activated protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold2664_108967-112522' '(at4g14580 : 397.0) CBL-interacting protein kinase; CBL-interacting protein kinase 4 (CIPK4); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 7 (TAIR:AT3G23000.1); Has 128256 Blast hits to 126264 proteins in 4408 species: Archae - 175; Bacteria - 15086; Metazoa - 46975; Fungi - 12948; Plants - 31367; Viruses - 524; Other Eukaryotes - 21181 (source: NCBI BLink). & (gnl|cdd|35803 : 314.0) no description available & (q6x4a2|cipk1_orysa : 286.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|29142 : 272.0) no description available & (reliability: 794.0) & (original description: Putative CIPK7, Description = CBL-interacting serine/threonine-protein kinase 7, PFAM = PF00069;PF03822)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold2668_247661-250200' '(at4g21860 : 177.0) methionine sulfoxide reductase B 2 (MSRB2); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B3 (TAIR:AT4G04800.1). & (gnl|cdd|36074 : 157.0) no description available & (gnl|cdd|85585 : 140.0) no description available & (reliability: 354.0) & (original description: Putative msr1, Description = Methionine-R-sulfoxide reductase, PFAM = PF01641)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold2707_262572-270177' '(q9xgh7|pp2a_tobac : 573.0) Serine/threonine-protein phosphatase PP2A catalytic subunit (EC 3.1.3.16) - Nicotiana tabacum (Common tobacco) & (at3g58500 : 550.0) Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].; protein phosphatase 2A-4 (PP2A-4); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A-3 (TAIR:AT2G42500.1); Has 6816 Blast hits to 6628 proteins in 481 species: Archae - 80; Bacteria - 203; Metazoa - 2402; Fungi - 1409; Plants - 984; Viruses - 3; Other Eukaryotes - 1735 (source: NCBI BLink). & (gnl|cdd|35592 : 481.0) no description available & (gnl|cdd|29063 : 384.0) no description available & (reliability: 1100.0) & (original description: Putative PP2A2, Description = Serine/threonine-protein phosphatase PP2A-2 catalytic subunit, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold2815_109016-113979' '(gnl|cdd|85563 : 582.0) no description available & (at3g26020 : 551.0) Encodes protein phosphatase 2A (PP2A) B'eta subunit. Targeted to nucleus and cytosol.; Protein phosphatase 2A regulatory B subunit family protein; FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: cytosol, nucleus, protein phosphatase type 2A complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT1G13460.2); Has 1197 Blast hits to 1175 proteins in 189 species: Archae - 0; Bacteria - 2; Metazoa - 578; Fungi - 161; Plants - 301; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|37296 : 518.0) no description available & (reliability: 1102.0) & (original description: Putative PP2A, Description = Protein phosphatase 2A regulatory B subunit family protein, PFAM = PF01603)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold2826_217293-238112' '(at5g59740 : 514.0) UDP-N-acetylglucosamine (UAA) transporter family; FUNCTIONS IN: galactose transmembrane transporter activity; INVOLVED IN: transmembrane transport; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: UDP-galactose transporter 5 (TAIR:AT3G46180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36794 : 364.0) no description available & (gnl|cdd|71878 : 241.0) no description available & (reliability: 1028.0) & (original description: Putative sll, Description = Adenosine 3'-phospho 5'-phosphosulfate transporter 1, PFAM = PF08449)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold2855_149347-172337' '(gnl|cdd|35419 : 220.0) no description available & (at3g50310 : 189.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 20 (MAPKKK20); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 19 (TAIR:AT5G67080.1); Has 114114 Blast hits to 112767 proteins in 3610 species: Archae - 125; Bacteria - 11707; Metazoa - 43224; Fungi - 11427; Plants - 28864; Viruses - 487; Other Eukaryotes - 18280 (source: NCBI BLink). & (gnl|cdd|29142 : 185.0) no description available & (p28582|cdpk_dauca : 94.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 378.0) & (original description: Putative MAPKKK19, Description = Mitogen-activated protein kinase kinase kinase A, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold3114_48990-53648' '(at5g57630 : 455.0) CBL-interacting protein kinase; CBL-interacting protein kinase 21 (CIPK21); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 23 (TAIR:AT1G30270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 355.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 306.0) no description available & (gnl|cdd|29142 : 278.0) no description available & (reliability: 910.0) & (original description: Putative CIPK21, Description = CBL-interacting serine/threonine-protein kinase 21, PFAM = PF00069;PF03822)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold3149_16645-22966' '(at2g22560 : 529.0) Kinase interacting (KIP1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT5G10500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71206 : 121.0) no description available & (reliability: 1022.0) & (original description: Putative KIP1, Description = Kinase-interacting protein 1, PFAM = PF07765)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold3251_39923-44595' '(at1g64300 : 688.0) Protein kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF1221 (InterPro:IPR010632), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT5G41730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70237 : 283.0) no description available & (gnl|cdd|35413 : 183.0) no description available & (reliability: 1376.0) & (original description: Putative At5g41730, Description = Protein kinase, PFAM = PF07714;PF06760)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold3294_17154-22636' '(at4g21860 : 250.0) methionine sulfoxide reductase B 2 (MSRB2); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B3 (TAIR:AT4G04800.1). & (gnl|cdd|36074 : 214.0) no description available & (gnl|cdd|85585 : 195.0) no description available & (reliability: 500.0) & (original description: Putative MSRB5, Description = Peptide methionine sulfoxide reductase B5, PFAM = PF01641)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold3308_205900-220388' '(at4g08500 : 420.0) Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301. Mediates cold, salt, cadmium and wounding stress signalling. Phosphorylates MEK1.; MAPK/ERK kinase kinase 1 (MEKK1); FUNCTIONS IN: protein binding, kinase binding, DNA binding, MAP kinase kinase kinase activity, kinase activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 9 (TAIR:AT4G08480.1); Has 132336 Blast hits to 130259 proteins in 4567 species: Archae - 142; Bacteria - 14700; Metazoa - 49430; Fungi - 12971; Plants - 32949; Viruses - 685; Other Eukaryotes - 21459 (source: NCBI BLink). & (gnl|cdd|35419 : 283.0) no description available & (gnl|cdd|29142 : 268.0) no description available & (q6x4a2|cipk1_orysa : 122.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 762.0) & (original description: Putative MEKK1, Description = Mitogen-activated protein kinase kinase kinase 1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold3379_175372-182349' '(at2g17890 : 786.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 16 (CPK16); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 18 (TAIR:AT4G36070.1); Has 126765 Blast hits to 124478 proteins in 3942 species: Archae - 195; Bacteria - 14619; Metazoa - 47448; Fungi - 14527; Plants - 27603; Viruses - 509; Other Eukaryotes - 21864 (source: NCBI BLink). & (p53681|crk_dauca : 429.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 367.0) no description available & (gnl|cdd|47550 : 269.0) no description available & (reliability: 1572.0) & (original description: Putative CPK16, Description = Calcium-dependent protein kinase 16, PFAM = PF00069;PF13499;PF13202)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold3478_145614-151035' '(at5g66710 : 318.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase, ATN1-like (InterPro:IPR015784), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G50720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35413 : 247.0) no description available & (gnl|cdd|47549 : 208.0) no description available & (p29619|cdc22_orysa : 95.9) Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Oryza sativa (Rice) & (reliability: 636.0) & (original description: Putative ATN1, Description = AT3g27560/MMJ24_11, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold3521_97622-103993' '(gnl|cdd|85563 : 740.0) no description available & (at3g26020 : 716.0) Encodes protein phosphatase 2A (PP2A) B'eta subunit. Targeted to nucleus and cytosol.; Protein phosphatase 2A regulatory B subunit family protein; FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: cytosol, nucleus, protein phosphatase type 2A complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT1G13460.2); Has 1197 Blast hits to 1175 proteins in 189 species: Archae - 0; Bacteria - 2; Metazoa - 578; Fungi - 161; Plants - 301; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|37296 : 678.0) no description available & (reliability: 1432.0) & (original description: Putative B'ETA, Description = Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform, PFAM = PF01603)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold3639_1-5169' '(at2g25620 : 367.0) Encodes DBP1, a member of the DBP factors (DNA-binding protein phosphatases) featuring sequence-specific DNA-binding and protein phosphatase activity. DBP1 is involved in plant-potyvirus interactions. Loss-of-function of DBP1 renders resistance to potyviruses.; DNA-binding protein phosphatase 1 (DBP1); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: regulation of defense response to virus; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G33700.1); Has 7196 Blast hits to 7030 proteins in 671 species: Archae - 12; Bacteria - 774; Metazoa - 1729; Fungi - 719; Plants - 2627; Viruses - 7; Other Eukaryotes - 1328 (source: NCBI BLink). & (gnl|cdd|35917 : 226.0) no description available & (gnl|cdd|29062 : 216.0) no description available & (reliability: 734.0) & (original description: Putative Os02g0799000, Description = Probable protein phosphatase 2C 27, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold3699_125086-135327' '(at3g24715 : 518.0) Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: PB1 domain-containing protein tyrosine kinase (TAIR:AT1G04700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 311.0) no description available & (gnl|cdd|87344 : 258.0) no description available & (q8l4h4|nork_medtr : 104.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1028.0) & (original description: Putative STY2, Description = Serine/threonine-protein kinase CTR1, PFAM = PF07714;PF00564)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold3771_126329-129099' '(at5g23720 : 103.0) Encodes a protein tyrosine phosphatase Propyzamide-Hypersensitive 1 (PHS1). One of the mutant alleles, phs1-1, is hypersensitive to the microtubule-destabilizing drug propyzamide, suggesting that PHS1 may be involved in phosphorylation cascades that control the dynamics of cortical microtubules in plant cells. A second allele, phs1-3, is hypersensitive to abscisic acid, indicating a possible involvement of PHS1 in ABA signalling.; PROPYZAMIDE-HYPERSENSITIVE 1 (PHS1); FUNCTIONS IN: protein tyrosine/serine/threonine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: cortical microtubule organization, regulation of gene expression, response to abscisic acid stimulus, regulation of stomatal movement; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422), Protein kinase-like domain (InterPro:IPR011009), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Actin-fragmin kinase, catalytic (InterPro:IPR015275), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340); BEST Arabidopsis thaliana protein match is: dual specificity protein phosphatase 1 (TAIR:AT3G23610.2); Has 3765 Blast hits to 3755 proteins in 331 species: Archae - 11; Bacteria - 94; Metazoa - 2032; Fungi - 332; Plants - 347; Viruses - 172; Other Eukaryotes - 777 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative PHS1, Description = Dual specificity phosphatase family protein, PFAM = )' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold3879_311631-318710' '(at3g17090 : 491.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: endomembrane system, protein serine/threonine phosphatase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G38520.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35919 : 367.0) no description available & (gnl|cdd|47660 : 160.0) no description available & (reliability: 982.0) & (original description: Putative pp2C2, Description = Serine/threonine phosphatase family, 2C domain protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold4099_150622-153453' '(at5g24360 : 357.0) inositol requiring 1-1 (IRE1-1); FUNCTIONS IN: endoribonuclease activity, producing 5'-phosphomonoesters, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, mRNA processing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), KEN domain, ribonuclease activator (InterPro:IPR010513), PUG domain (InterPro:IPR006567), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Quinonprotein alcohol dehydrogenase-like (InterPro:IPR011047); BEST Arabidopsis thaliana protein match is: Endoribonuclease/protein kinase IRE1-like (TAIR:AT2G17520.1). & (gnl|cdd|36245 : 321.0) no description available & (gnl|cdd|69972 : 164.0) no description available & (reliability: 714.0) & (original description: Putative ern2, Description = Serine/threonine-protein kinase/endoribonuclease IRE1, PFAM = PF06479;PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold4106_10444-16877' '(at4g38520 : 613.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35919 : 413.0) no description available & (gnl|cdd|47660 : 181.0) no description available & (reliability: 1226.0) & (original description: Putative pp2C2, Description = Serine/threonine phosphatase family, 2C domain protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold4417_1-3305' '(gnl|cdd|35820 : 464.0) no description available & (at1g54610 : 411.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G05050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29142 : 241.0) no description available & (q38772|cdc2a_antma : 222.0) Cell division control protein 2 homolog A (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (reliability: 814.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold4417_150-3068' '(gnl|cdd|35820 : 198.0) no description available & (at1g54610 : 187.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G05050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29142 : 95.3) no description available & (reliability: 364.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold4513_14438-21154' '(at5g47750 : 759.0) D6 protein kinase like 2 (D6PKL2); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleolus, nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 1 (TAIR:AT4G26610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p47997|g11a_orysa : 714.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|35830 : 678.0) no description available & (gnl|cdd|47550 : 167.0) no description available & (reliability: 1518.0) & (original description: Putative Adi3, Description = Protein kinase G11A, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold4531_10086-20077' '(gnl|cdd|35887 : 607.0) no description available & (at5g67380 : 600.0) casein kinase II catalytic subunit alpha; casein kinase alpha 1 (CKA1); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase II, alpha chain 2 (TAIR:AT3G50000.1); Has 73369 Blast hits to 72658 proteins in 2362 species: Archae - 60; Bacteria - 7223; Metazoa - 28693; Fungi - 10783; Plants - 10981; Viruses - 246; Other Eukaryotes - 15383 (source: NCBI BLink). & (p28523|csk2a_maize : 577.0) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II) (CK2-alpha) - Zea mays (Maize) & (gnl|cdd|84488 : 202.0) no description available & (reliability: 1200.0) & (original description: Putative CKA1, Description = Casein kinase II subunit alpha-1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold4671_110203-114663' '(at4g26470 : 306.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; LOCATED IN: cytoplasm; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G24110.1); Has 6386 Blast hits to 5124 proteins in 870 species: Archae - 0; Bacteria - 22; Metazoa - 2243; Fungi - 905; Plants - 2494; Viruses - 0; Other Eukaryotes - 722 (source: NCBI BLink). & (reliability: 612.0) & (original description: Putative CML21, Description = Probable calcium-binding protein CML21, PFAM = PF13499;PF13499)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold4913_20968-27819' '(at5g10480 : 299.0) Protein tyrosine phosphatase-like involved in cell division and differentiation. Interacts with CDKA;1 only in its phosphorylated form, preventing dephosphorylation. Overexpression slowed down cell division in suspension cell cultures at the G2-to-M transition and early mitosis and inhibited Arabidopsis seedling growth. Localized in the cytoplasm of dividing cells but moved into the nucleus upon cell differentiation. Based on complementation of yeast mutant PAS2 has acyl-CoA dehydratase activity. It interacts with CER10, a component of the microsomal fatty acid elongase complex, suggesting a role in synthesis of VLCFAs (very long chain fatty acids).; PASTICCINO 2 (PAS2); CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase-like, PTPLA (InterPro:IPR007482); BEST Arabidopsis thaliana protein match is: Protein-tyrosine phosphatase-like, PTPLA (TAIR:AT5G59770.1). & (gnl|cdd|38397 : 185.0) no description available & (gnl|cdd|67978 : 171.0) no description available & (reliability: 598.0) & (original description: Putative PAS2, Description = Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2, PFAM = PF04387)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold4930_22555-26574' '(at5g58950 : 615.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G46930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 291.0) no description available & (gnl|cdd|47549 : 247.0) no description available & (q02723|rkin1_secce : 97.1) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (reliability: 1230.0) & (original description: Putative pk1, Description = Protein kinase (PK), PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold5260_33644-38521' '(at3g62260 : 387.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G48040.1); Has 7565 Blast hits to 7530 proteins in 876 species: Archae - 12; Bacteria - 1215; Metazoa - 1621; Fungi - 781; Plants - 2594; Viruses - 9; Other Eukaryotes - 1333 (source: NCBI BLink). & (gnl|cdd|29062 : 227.0) no description available & (gnl|cdd|35917 : 226.0) no description available & (reliability: 774.0) & (original description: Putative At3g62260, Description = Probable protein phosphatase 2C 49, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold5290_141780-148069' '(at3g53930 : 505.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase, putative (InterPro:IPR020655), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G37840.1); Has 133875 Blast hits to 131243 proteins in 4644 species: Archae - 156; Bacteria - 15368; Metazoa - 49842; Fungi - 12879; Plants - 32788; Viruses - 546; Other Eukaryotes - 22296 (source: NCBI BLink). & (gnl|cdd|35815 : 337.0) no description available & (gnl|cdd|47550 : 281.0) no description available & (q75h77|sapka_orysa : 145.0) Serine/threonine-protein kinase SAPK10 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 10) - Oryza sativa (Rice) & (reliability: 1010.0) & (original description: Putative hCDK6, Description = Predicted protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold5431_4107-10457' '(at4g21390 : 435.0) B120; FUNCTIONS IN: protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61610.1); Has 119638 Blast hits to 117946 proteins in 4361 species: Archae - 104; Bacteria - 13356; Metazoa - 43759; Fungi - 9937; Plants - 34742; Viruses - 415; Other Eukaryotes - 17325 (source: NCBI BLink). & (gnl|cdd|36401 : 285.0) no description available & (q8lkz1|nork_pea : 193.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 172.0) no description available & (reliability: 812.0) & (original description: Putative PGSC0003DMG400001059, Description = Cysteine-rich RLK (Receptor-like kinase) protein, PFAM = PF08276;PF01453;PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold5573_77811-80932' '(at2g24765 : 136.0) GTPase required for Golgi targeting of GRIP domain proteins. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner; ADP-ribosylation factor 3 (ARF3); FUNCTIONS IN: protein binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: Golgi stack, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor A1B (TAIR:AT5G14670.1); Has 9110 Blast hits to 9109 proteins in 393 species: Archae - 2; Bacteria - 4; Metazoa - 4531; Fungi - 1457; Plants - 1456; Viruses - 3; Other Eukaryotes - 1657 (source: NCBI BLink). & (gnl|cdd|35293 : 119.0) no description available & (gnl|cdd|47508 : 117.0) no description available & (q06396|arf1_orysa : 107.0) ADP-ribosylation factor 1 (13 kDa cold-induced protein) - Oryza sativa (Rice) & (reliability: 272.0) & (original description: Putative arf1, Description = ADP-ribosylation factor 1, PFAM = PF00025)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold5590_76967-90791' '(at4g18950 : 585.0) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Integrin-linked protein kinase (InterPro:IPR016253), Ankyrin repeat-containing domain (InterPro:IPR020683), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G58760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 243.0) no description available & (gnl|cdd|84488 : 188.0) no description available & (q6x4a2|cipk1_orysa : 108.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1170.0) & (original description: Putative APK1, Description = Ankyrin-kinase protein, PFAM = PF07714;PF12796)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold6244_94071-110075' '(at2g24765 : 313.0) GTPase required for Golgi targeting of GRIP domain proteins. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner; ADP-ribosylation factor 3 (ARF3); FUNCTIONS IN: protein binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: Golgi stack, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor A1B (TAIR:AT5G14670.1); Has 9110 Blast hits to 9109 proteins in 393 species: Archae - 2; Bacteria - 4; Metazoa - 4531; Fungi - 1457; Plants - 1456; Viruses - 3; Other Eukaryotes - 1657 (source: NCBI BLink). & (gnl|cdd|58034 : 291.0) no description available & (gnl|cdd|35293 : 261.0) no description available & (q06396|arf1_orysa : 213.0) ADP-ribosylation factor 1 (13 kDa cold-induced protein) - Oryza sativa (Rice) & (reliability: 626.0) & (original description: Putative ARF1, Description = ADP-ribosylation factor 1, PFAM = PF00025)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold6964_63531-69413' '(gnl|cdd|35419 : 227.0) no description available & (gnl|cdd|29142 : 198.0) no description available & (at3g50310 : 177.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 20 (MAPKKK20); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 19 (TAIR:AT5G67080.1); Has 114114 Blast hits to 112767 proteins in 3610 species: Archae - 125; Bacteria - 11707; Metazoa - 43224; Fungi - 11427; Plants - 28864; Viruses - 487; Other Eukaryotes - 18280 (source: NCBI BLink). & (p53683|cdpk2_orysa : 100.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (reliability: 354.0) & (original description: Putative PGSC0003DMG400014807, Description = Mitogen-activated protein kinase kinase kinase 21, putative, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold7152_28934-33132' '(at5g47750 : 751.0) D6 protein kinase like 2 (D6PKL2); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleolus, nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 1 (TAIR:AT4G26610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p47997|g11a_orysa : 679.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|35830 : 670.0) no description available & (gnl|cdd|47550 : 169.0) no description available & (reliability: 1502.0) & (original description: Putative D6PKL2, Description = Serine/threonine-protein kinase D6PKL2, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold7194_49386-56757' '(at2g25620 : 101.0) Encodes DBP1, a member of the DBP factors (DNA-binding protein phosphatases) featuring sequence-specific DNA-binding and protein phosphatase activity. DBP1 is involved in plant-potyvirus interactions. Loss-of-function of DBP1 renders resistance to potyviruses.; DNA-binding protein phosphatase 1 (DBP1); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: regulation of defense response to virus; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G33700.1); Has 7196 Blast hits to 7030 proteins in 671 species: Archae - 12; Bacteria - 774; Metazoa - 1729; Fungi - 719; Plants - 2627; Viruses - 7; Other Eukaryotes - 1328 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative MPC7, Description = Protein phosphatase 2C, PFAM = )' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold7457_8199-23521' '(at5g03730 : 836.0) Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed.; CONSTITUTIVE TRIPLE RESPONSE 1 (CTR1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G24480.1); Has 126606 Blast hits to 124675 proteins in 4966 species: Archae - 112; Bacteria - 13843; Metazoa - 48138; Fungi - 11278; Plants - 33351; Viruses - 509; Other Eukaryotes - 19375 (source: NCBI BLink). & (gnl|cdd|35413 : 305.0) no description available & (gnl|cdd|87344 : 243.0) no description available & (q8lkz1|nork_pea : 115.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 1672.0) & (original description: Putative CTR1, Description = Serine/threonine-protein kinase CTR1, PFAM = PF14381;PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold7457_8433-12633' '(at5g03730 : 313.0) Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed.; CONSTITUTIVE TRIPLE RESPONSE 1 (CTR1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G24480.1); Has 126606 Blast hits to 124675 proteins in 4966 species: Archae - 112; Bacteria - 13843; Metazoa - 48138; Fungi - 11278; Plants - 33351; Viruses - 509; Other Eukaryotes - 19375 (source: NCBI BLink). & (gnl|cdd|35413 : 203.0) no description available & (gnl|cdd|29142 : 173.0) no description available & (q8lkz1|nork_pea : 98.2) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 626.0) & (original description: Putative CTR1, Description = Serine/threonine protein kinase, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold7572_25991-41470' '(at4g35780 : 730.0) ACT-like protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Amino acid-binding ACT (InterPro:IPR002912), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ACT-like protein tyrosine kinase family protein (TAIR:AT2G17700.1); Has 132714 Blast hits to 130570 proteins in 5062 species: Archae - 147; Bacteria - 14500; Metazoa - 50865; Fungi - 12053; Plants - 33999; Viruses - 512; Other Eukaryotes - 20638 (source: NCBI BLink). & (gnl|cdd|35413 : 316.0) no description available & (gnl|cdd|87344 : 267.0) no description available & (q8lkz1|nork_pea : 119.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 1460.0) & (original description: Putative STY17, Description = Serine/threonine-protein kinase STY17, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold7826_38451-47466' '(at3g46920 : 686.0) Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT1G79570.1); Has 114688 Blast hits to 113328 proteins in 4810 species: Archae - 114; Bacteria - 11620; Metazoa - 44899; Fungi - 9603; Plants - 31346; Viruses - 418; Other Eukaryotes - 16688 (source: NCBI BLink). & (gnl|cdd|35413 : 256.0) no description available & (gnl|cdd|87344 : 200.0) no description available & (q8lkz1|nork_pea : 96.3) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 1372.0) & (original description: Putative STY2, Description = Serine/threonine-protein kinase CTR1, PFAM = PF07714;PF00564)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold8187_23543-42436' '(at5g35410 : 647.0) encodes a member of the CBL-interacting protein kinase family, is a regulatory component controlling plant potassium nutrition; SALT OVERLY SENSITIVE 2 (SOS2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 8 (TAIR:AT4G24400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 473.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 305.0) no description available & (gnl|cdd|47550 : 258.0) no description available & (reliability: 1294.0) & (original description: Putative cipk, Description = Non-specific serine/threonine protein kinase, PFAM = PF03822;PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold8204_1-4441' '(gnl|cdd|29029 : 128.0) no description available & (gnl|cdd|36928 : 117.0) no description available & (at3g23610 : 105.0) Encodes a dual specificity protein phosphatase whose activity is modulated by CaM binding.; dual specificity protein phosphatase 1 (DSPTP1); CONTAINS InterPro DOMAIN/s: Dual specificity phosphatase (InterPro:IPR020417), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: MAPK phosphatase 2 (TAIR:AT3G06110.3). & (reliability: 210.0) & (original description: Putative puc, Description = Dual specificity protein phosphatase 16, PFAM = PF00782)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold8701_12471-21976' '(at4g33080 : 664.0) AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), Protein kinase-like domain (InterPro:IPR011009), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT2G19400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35825 : 664.0) no description available & (gnl|cdd|47550 : 274.0) no description available & (p47997|g11a_orysa : 151.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 1328.0) & (original description: Putative ndrB, Description = Putative uncharacterized protein ndrB, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold8756_3061-28991' '(at3g10550 : 1028.0) Has 3'-phosphatase activity against both phosphatidylinositol-3,5-bisphosphate (PtdIns3,5P2) and Phosphatidylinositol-3-phosphate (PtdIns3P). The in vitro activity was higher with PtdIns3,5P2 than with PtdIns3P.; Myotubularin-like phosphatases II superfamily; FUNCTIONS IN: phosphatidylinositol-3-phosphatase activity, phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Myotubularin phosphatase (InterPro:IPR017906), GRAM (InterPro:IPR004182), Myotubularin-related (InterPro:IPR010569); BEST Arabidopsis thaliana protein match is: Myotubularin-like phosphatases II superfamily (TAIR:AT5G04540.1); Has 1697 Blast hits to 1550 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 1273; Fungi - 128; Plants - 40; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink). & (gnl|cdd|39672 : 688.0) no description available & (gnl|cdd|87116 : 140.0) no description available & (reliability: 2056.0) & (original description: Putative MTM1, Description = Phosphatidylinositol-3-phosphatase myotubularin-1, PFAM = PF06602)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold8925_19819-27934' '(at2g20470 : 745.0) AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: male gametophyte; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT1G03920.1); Has 111387 Blast hits to 110059 proteins in 3981 species: Archae - 150; Bacteria - 13980; Metazoa - 39554; Fungi - 12201; Plants - 25842; Viruses - 438; Other Eukaryotes - 19222 (source: NCBI BLink). & (gnl|cdd|35825 : 704.0) no description available & (gnl|cdd|47550 : 283.0) no description available & (p47997|g11a_orysa : 162.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 1490.0) & (original description: Putative ndrA, Description = Putative uncharacterized protein ndrA, PFAM = PF00069;PF00433)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold9496_8776-15583' '(at3g02750 : 498.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G36250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35917 : 201.0) no description available & (gnl|cdd|29062 : 181.0) no description available & (reliability: 996.0) & (original description: Putative Os11g0417400, Description = Probable protein phosphatase 2C 75, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'nbv0.5scaffold9708_10742-14822' '(at3g45100 : 619.0) encodes Arabidopsis homolog of a conserved protein involved in the first step of the GPI biosynthetic pathway.; SETH2; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: GPI anchor biosynthetic process, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PIGA, GPI anchor biosynthesis (InterPro:IPR013234), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G73160.1); Has 19927 Blast hits to 19902 proteins in 2481 species: Archae - 910; Bacteria - 15350; Metazoa - 164; Fungi - 171; Plants - 192; Viruses - 0; Other Eukaryotes - 3140 (source: NCBI BLink). & (gnl|cdd|36327 : 521.0) no description available & (gnl|cdd|87485 : 163.0) no description available & (reliability: 1238.0) & (original description: Putative PigA, Description = Phosphatidylinositol N-acetylglucosaminyltransferase, PFAM = PF08288;PF00534)' T '29.4' 'protein.postranslational modification' 'niben044scf00000314ctg012_4252-10190' '(at3g52890 : 655.0) KCBP-interacting protein kinase interacts specifically with the tail region of KCBP; KCBP-interacting protein kinase (KIPK); FUNCTIONS IN: protein binding, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G36350.1); Has 124693 Blast hits to 89359 proteins in 3581 species: Archae - 52; Bacteria - 15752; Metazoa - 49633; Fungi - 14477; Plants - 20322; Viruses - 421; Other Eukaryotes - 24036 (source: NCBI BLink). & (gnl|cdd|35830 : 615.0) no description available & (p47997|g11a_orysa : 524.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 171.0) no description available & (reliability: 1310.0) & (original description: Putative BnaC06g14210D, Description = BnaC06g14210D protein, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00000901ctg013_71-5949' '(p51139|msk3_medsa : 183.0) Glycogen synthase kinase-3 homolog MsK-3 (EC 2.7.11.1) - Medicago sativa (Alfalfa) & (at5g14640 : 181.0) shaggy-like kinase 13 (SK13); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: response to salt stress, hyperosmotic response; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: shaggy-related kinase 11 (TAIR:AT5G26751.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35877 : 146.0) no description available & (reliability: 362.0) & (original description: Putative shag, Description = Shaggy-related protein kinase theta, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben044scf00001139ctg007_4426-8521' '(at1g68830 : 357.0) STN7 protein kinase; required for state transitions, phosphorylation of the major antenna complex (LHCII) between PSII and PSI, and light adaptation; STT7 homolog STN7 (STN7); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: regulation of photosynthesis, light reaction, circadian rhythm; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B1;2 (TAIR:AT2G38620.2); Has 29571 Blast hits to 29413 proteins in 1565 species: Archae - 57; Bacteria - 3753; Metazoa - 11524; Fungi - 3757; Plants - 4496; Viruses - 50; Other Eukaryotes - 5934 (source: NCBI BLink). & (q84v18|stt7_chlre : 139.0) Serine/threonine-protein kinase stt7, chloroplast precursor (EC 2.7.11.1) - Chlamydomonas reinhardtii & (reliability: 714.0) & (original description: Putative SNT, Description = Serine/threonine-protein kinase, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben044scf00001207ctg003_660-5055' '(at5g35370 : 787.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-2 5 (TAIR:AT4G32300.1); Has 120687 Blast hits to 119102 proteins in 4782 species: Archae - 112; Bacteria - 13256; Metazoa - 44443; Fungi - 10300; Plants - 34517; Viruses - 382; Other Eukaryotes - 17677 (source: NCBI BLink). & (gnl|cdd|36401 : 310.0) no description available & (p17801|kpro_maize : 292.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 173.0) no description available & (reliability: 1574.0) & (original description: Putative At5g35370, Description = G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370, PFAM = PF00069;PF01453)' T '29.4' 'protein.postranslational modification' 'niben044scf00001404ctg028_663-5994' '(at1g60940 : 592.0) encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress.; SNF1-related protein kinase 2.10 (SNRK2.10); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G10940.1); Has 111565 Blast hits to 109717 proteins in 3008 species: Archae - 112; Bacteria - 13169; Metazoa - 40737; Fungi - 12092; Plants - 25831; Viruses - 494; Other Eukaryotes - 19130 (source: NCBI BLink). & (q7xqp4|sapk7_orysa : 576.0) Serine/threonine-protein kinase SAPK7 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 7) - Oryza sativa (Rice) & (gnl|cdd|35803 : 310.0) no description available & (gnl|cdd|29142 : 267.0) no description available & (reliability: 1184.0) & (original description: Putative SRK2B, Description = Serine/threonine-protein kinase SRK2B, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00001713ctg002_5417-10629' '(at1g62400 : 610.0) high leaf temperature 1 (HT1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G58950.1); Has 132835 Blast hits to 130849 proteins in 5233 species: Archae - 136; Bacteria - 14325; Metazoa - 51137; Fungi - 12092; Plants - 33829; Viruses - 555; Other Eukaryotes - 20761 (source: NCBI BLink). & (gnl|cdd|35413 : 302.0) no description available & (gnl|cdd|47549 : 237.0) no description available & (q8lpb4|pskr_dauca : 108.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1220.0) & (original description: Putative HT1, Description = Serine/threonine-protein kinase HT1, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben044scf00001730ctg001_1226-9878' '(at1g73670 : 765.0) member of MAP Kinase; MAP kinase 15 (MPK15); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18150.3); Has 118424 Blast hits to 117259 proteins in 3821 species: Archae - 110; Bacteria - 13457; Metazoa - 43793; Fungi - 12258; Plants - 28693; Viruses - 571; Other Eukaryotes - 19542 (source: NCBI BLink). & (q5z9j0|mpk12_orysa : 737.0) Mitogen-activated protein kinase 12 (EC 2.7.11.24) (MAP kinase 12) (OsBWMK1) (Blast- and wound-induced MAP kinase 1) (MAP kinase 1) (OsMAPK1) - Oryza sativa (Rice) & (gnl|cdd|35879 : 482.0) no description available & (gnl|cdd|29142 : 260.0) no description available & (reliability: 1488.0) & (original description: Putative MPK15, Description = Mitogen-activated protein kinase 15, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00001947ctg003_7463-20105' '(at5g03730 : 522.0) Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed.; CONSTITUTIVE TRIPLE RESPONSE 1 (CTR1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G24480.1); Has 126606 Blast hits to 124675 proteins in 4966 species: Archae - 112; Bacteria - 13843; Metazoa - 48138; Fungi - 11278; Plants - 33351; Viruses - 509; Other Eukaryotes - 19375 (source: NCBI BLink). & (reliability: 1044.0) & (original description: Putative CTR1, Description = Constitutive triple response 1, PFAM = PF14381)' T '29.4' 'protein.postranslational modification' 'niben044scf00001959ctg000_1-8942' '(at2g04550 : 322.0) Encodes a protein phosphatase that interacts with MPK12, but not with other MAP kinases. It can dephosphorylate a dually phosphorylated MPK12 in vitro and can inactivate MPK12 in vivo. ibr5 mutants have reduced sensitivity to auxin and abscisic acid. IBR5 promotes auxin responses, including auxin-inducible transcription, differently than the TIR1 auxin receptor and without destabilizing Aux/IAA repressor proteins.; indole-3-butyric acid response 5 (IBR5); CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: dual specificity protein phosphatase 1 (TAIR:AT3G23610.2); Has 3359 Blast hits to 3359 proteins in 285 species: Archae - 9; Bacteria - 32; Metazoa - 1975; Fungi - 228; Plants - 239; Viruses - 200; Other Eukaryotes - 676 (source: NCBI BLink). & (gnl|cdd|29029 : 133.0) no description available & (gnl|cdd|36928 : 126.0) no description available & (reliability: 644.0) & (original description: Putative IBR5, Description = Protein-tyrosine-phosphatase IBR5, PFAM = PF00782)' T '29.4' 'protein.postranslational modification' 'niben044scf00002051ctg000_4578-11630' '(at3g23340 : 629.0) casein kinase I-like 10 (ckl10); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase I (TAIR:AT4G14340.1); Has 56550 Blast hits to 56234 proteins in 2232 species: Archae - 39; Bacteria - 9117; Metazoa - 21673; Fungi - 6267; Plants - 8804; Viruses - 331; Other Eukaryotes - 10319 (source: NCBI BLink). & (gnl|cdd|36378 : 475.0) no description available & (gnl|cdd|29142 : 153.0) no description available & (reliability: 1258.0) & (original description: Putative ckl5, Description = Casein kinase I-like protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00002063ctg008_1-4081' '(at5g09890 : 464.0) Protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT4G14350.2); Has 109819 Blast hits to 108536 proteins in 3259 species: Archae - 120; Bacteria - 13353; Metazoa - 38509; Fungi - 11858; Plants - 26725; Viruses - 411; Other Eukaryotes - 18843 (source: NCBI BLink). & (gnl|cdd|35825 : 361.0) no description available & (gnl|cdd|47550 : 144.0) no description available & (p47997|g11a_orysa : 91.7) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 928.0) & (original description: Putative ndrA, Description = Serine/threonine-protein kinase CBK1, PFAM = PF00433;PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00002163ctg005_40336-45198' '(at1g67580 : 756.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G63370.4); Has 126651 Blast hits to 124962 proteins in 4234 species: Archae - 92; Bacteria - 13816; Metazoa - 47970; Fungi - 13169; Plants - 29930; Viruses - 638; Other Eukaryotes - 21036 (source: NCBI BLink). & (gnl|cdd|35882 : 567.0) no description available & (p29618|cdc21_orysa : 298.0) Cell division control protein 2 homolog 1 (EC 2.7.11.22) - Oryza sativa (Rice) & (gnl|cdd|29142 : 289.0) no description available & (reliability: 1512.0) & (original description: Putative CAPK, Description = Cyclin-dependent kinase 11B, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00002414ctg000_4992-10960' '(at5g24430 : 547.0) Calcium-dependent protein kinase (CDPK) family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Calcium-dependent protein kinase (CDPK) family protein (TAIR:AT3G49370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p53681|crk_dauca : 492.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 251.0) no description available & (gnl|cdd|29142 : 190.0) no description available & (reliability: 988.0) & (original description: Putative CRK1, Description = CDPK-related protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00002424ctg003_1162-6958' '(at1g61390 : 720.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: carbohydrate binding, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; CONTAINS InterPro DOMAIN/s: Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-1 29 (TAIR:AT1G61380.1); Has 121755 Blast hits to 120061 proteins in 4542 species: Archae - 112; Bacteria - 13453; Metazoa - 45372; Fungi - 9712; Plants - 35005; Viruses - 409; Other Eukaryotes - 17692 (source: NCBI BLink). & (gnl|cdd|36401 : 309.0) no description available & (p07761|slsg6_braol : 291.0) S-locus-specific glycoprotein S6 precursor (SLSG-6) - Brassica oleracea (Wild cabbage) & (gnl|cdd|47549 : 165.0) no description available & (reliability: 1424.0) & (original description: Putative At1g61390, Description = G-type lectin S-receptor-like serine/threonine-protein kinase At1g61390, PFAM = PF00954;PF01453;PF08276;PF07714)' T '29.4' 'protein.postranslational modification' 'niben044scf00002436ctg006_4241-7861' '(at5g55560 : 485.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 3 (TAIR:AT3G48260.1); Has 100897 Blast hits to 100061 proteins in 3189 species: Archae - 71; Bacteria - 9572; Metazoa - 37309; Fungi - 9559; Plants - 27616; Viruses - 356; Other Eukaryotes - 16414 (source: NCBI BLink). & (gnl|cdd|35804 : 444.0) no description available & (gnl|cdd|29142 : 196.0) no description available & (q6x4a2|cipk1_orysa : 87.8) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 970.0) & (original description: Putative WNK11, Description = Probable serine/threonine-protein kinase WNK11, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00002714ctg003_11210-18366' '(at2g17890 : 833.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 16 (CPK16); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 18 (TAIR:AT4G36070.1); Has 126765 Blast hits to 124478 proteins in 3942 species: Archae - 195; Bacteria - 14619; Metazoa - 47448; Fungi - 14527; Plants - 27603; Viruses - 509; Other Eukaryotes - 21864 (source: NCBI BLink). & (p53681|crk_dauca : 450.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 369.0) no description available & (gnl|cdd|47550 : 265.0) no description available & (reliability: 1666.0) & (original description: Putative CPK16, Description = Calcium-dependent protein kinase 16, PFAM = PF00069;PF13833;PF13499)' T '29.4' 'protein.postranslational modification' 'niben044scf00002751ctg010_6482-16108' '(at3g18040 : 803.0) Encodes a protein with similarity to MAP kinases (MAPK9).Expressed preferentially in guard cells and appears to be involved in reactive oxygen species mediated ABA signaling.; MAP kinase 9 (MPK9); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: MAP kinase 15 (TAIR:AT1G73670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5z9j0|mpk12_orysa : 764.0) Mitogen-activated protein kinase 12 (EC 2.7.11.24) (MAP kinase 12) (OsBWMK1) (Blast- and wound-induced MAP kinase 1) (MAP kinase 1) (OsMAPK1) - Oryza sativa (Rice) & (gnl|cdd|35879 : 481.0) no description available & (gnl|cdd|29142 : 265.0) no description available & (reliability: 1528.0) & (original description: Putative MPK9, Description = Mitogen-activated protein kinase 9, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00002869ctg000_21212-27638' '(at5g10480 : 282.0) Protein tyrosine phosphatase-like involved in cell division and differentiation. Interacts with CDKA;1 only in its phosphorylated form, preventing dephosphorylation. Overexpression slowed down cell division in suspension cell cultures at the G2-to-M transition and early mitosis and inhibited Arabidopsis seedling growth. Localized in the cytoplasm of dividing cells but moved into the nucleus upon cell differentiation. Based on complementation of yeast mutant PAS2 has acyl-CoA dehydratase activity. It interacts with CER10, a component of the microsomal fatty acid elongase complex, suggesting a role in synthesis of VLCFAs (very long chain fatty acids).; PASTICCINO 2 (PAS2); CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase-like, PTPLA (InterPro:IPR007482); BEST Arabidopsis thaliana protein match is: Protein-tyrosine phosphatase-like, PTPLA (TAIR:AT5G59770.1). & (gnl|cdd|38397 : 176.0) no description available & (gnl|cdd|67978 : 160.0) no description available & (reliability: 564.0) & (original description: Putative PAS2, Description = Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2, PFAM = PF04387)' T '29.4' 'protein.postranslational modification' 'niben044scf00002909ctg011_5366-12030' '(at5g50000 : 655.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G01490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35413 : 315.0) no description available & (gnl|cdd|87344 : 223.0) no description available & (q8l4h4|nork_medtr : 95.1) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1310.0) & (original description: Putative DR01, Description = Protein kinase family protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben044scf00002927ctg008_1925-8541' '(p51614|chit3_vitvi : 394.0) Acidic endochitinase precursor (EC 3.2.1.14) - Vitis vinifera (Grape) & (at5g24090 : 393.0) Chitinase A (class III) expressed exclusively under environmental stress conditions.; chitinase A (CHIA); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to salt stress, response to cold, cellular response to water deprivation, response to wounding, response to light intensity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, chitinase active site (InterPro:IPR001579), Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39899 : 334.0) no description available & (gnl|cdd|47549 : 169.0) no description available & (reliability: 748.0) & (original description: Putative CHIB1, Description = Acidic endochitinase, PFAM = PF07714;PF00704)' T '29.4' 'protein.postranslational modification' 'niben044scf00003201ctg000_2397-14709' '(at1g17720 : 460.0) type 2A protein serine/threonine phosphatase 55 kDa B; ATB BETA; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Protein phosphatase 2A, regulatory subunit PR55 (InterPro:IPR000009), Protein phosphatase 2A, regulatory subunit PR55, conserved site (InterPro:IPR018067), WD40 repeat, conserved site (InterPro:IPR019775), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform (TAIR:AT1G51690.3); Has 1042 Blast hits to 998 proteins in 278 species: Archae - 0; Bacteria - 71; Metazoa - 509; Fungi - 214; Plants - 122; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (q5z8z7|2aba_orysa : 450.0) Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform (PP2A, subunit B, alpha isoform) - Oryza sativa (Rice) & (gnl|cdd|36568 : 409.0) no description available & (gnl|cdd|34770 : 340.0) no description available & (reliability: 920.0) & (original description: Putative PP2AB2, Description = Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform, PFAM = PF00400)' T '29.4' 'protein.postranslational modification' 'niben044scf00003427ctg038_6437-11113' '(at1g18030 : 225.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G51470.1); Has 5792 Blast hits to 5781 proteins in 307 species: Archae - 2; Bacteria - 31; Metazoa - 1378; Fungi - 630; Plants - 2460; Viruses - 9; Other Eukaryotes - 1282 (source: NCBI BLink). & (gnl|cdd|35917 : 102.0) no description available & (gnl|cdd|29062 : 98.2) no description available & (reliability: 450.0) & (original description: Putative pco111635, Description = AtPP2C08, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben044scf00003607ctg007_2318-7887' '(at1g69220 : 293.0) Encodes a putative serine/threonine kinase (SIK1).; SIK1; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: mitochondrion, chromosome, centromeric region, chromosome, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G53165.2); Has 135073 Blast hits to 131353 proteins in 4820 species: Archae - 174; Bacteria - 17099; Metazoa - 50056; Fungi - 12728; Plants - 33057; Viruses - 559; Other Eukaryotes - 21400 (source: NCBI BLink). & (gnl|cdd|35796 : 175.0) no description available & (gnl|cdd|29142 : 168.0) no description available & (reliability: 586.0) & (original description: Putative M4K2, Description = M4K2, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00003667ctg004_568-7997' '(at4g38470 : 503.0) ACT-like protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Amino acid-binding ACT (InterPro:IPR002912), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: ACT-like protein tyrosine kinase family protein (TAIR:AT4G35780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 158.0) no description available & (gnl|cdd|87344 : 151.0) no description available & (q8l4h4|nork_medtr : 80.1) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1006.0) & (original description: Putative ACTK, Description = Serine/threonine-protein kinase HT1, PFAM = PF01842;PF07714)' T '29.4' 'protein.postranslational modification' 'niben044scf00003913ctg000_1874-10607' '(at3g58640 : 328.0) Mitogen activated protein kinase kinase kinase-related; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G31010.2); Has 125614 Blast hits to 123525 proteins in 4988 species: Archae - 158; Bacteria - 13731; Metazoa - 47851; Fungi - 11388; Plants - 32996; Viruses - 518; Other Eukaryotes - 18972 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative BnaC04g41700D, Description = MAP kinase kinase kinase-like protein, PFAM = PF14381;PF14381)' T '29.4' 'protein.postranslational modification' 'niben044scf00003947ctg007_51790-64933' '(at3g03940 : 1167.0) Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT5G18190.1); Has 16177 Blast hits to 16113 proteins in 1419 species: Archae - 20; Bacteria - 5310; Metazoa - 4811; Fungi - 1519; Plants - 1815; Viruses - 223; Other Eukaryotes - 2479 (source: NCBI BLink). & (gnl|cdd|36379 : 245.0) no description available & (gnl|cdd|29142 : 112.0) no description available & (reliability: 2334.0) & (original description: Putative CKI, Description = Casein kinase I, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00003947ctg007_52527-64954' '(at3g03940 : 1127.0) Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT5G18190.1); Has 16177 Blast hits to 16113 proteins in 1419 species: Archae - 20; Bacteria - 5310; Metazoa - 4811; Fungi - 1519; Plants - 1815; Viruses - 223; Other Eukaryotes - 2479 (source: NCBI BLink). & (gnl|cdd|36379 : 245.0) no description available & (gnl|cdd|29142 : 112.0) no description available & (reliability: 2254.0) & (original description: Putative CKI, Description = Casein kinase I, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00004422ctg000_3268-5648' '(q84tc6|sapk2_orysa : 184.0) Serine/threonine-protein kinase SAPK2 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 2) - Oryza sativa (Rice) & (at1g78290 : 181.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to karrikin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G33950.1); Has 112604 Blast hits to 110873 proteins in 3029 species: Archae - 114; Bacteria - 13128; Metazoa - 41421; Fungi - 12195; Plants - 25871; Viruses - 459; Other Eukaryotes - 19416 (source: NCBI BLink). & (gnl|cdd|29142 : 107.0) no description available & (gnl|cdd|35803 : 106.0) no description available & (reliability: 362.0) & (original description: Putative pk5, Description = Serine/threonine-protein kinase SAPK7, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00004508ctg004_413-3738' '(at5g01820 : 452.0) Encodes a CBL-interacting serine/threonine protein kinase.; serine/threonine protein kinase 1 (SR1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SOS3-interacting protein 4 (TAIR:AT2G30360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35803 : 337.0) no description available & (q6x4a2|cipk1_orysa : 303.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|29142 : 289.0) no description available & (reliability: 904.0) & (original description: Putative CIPK14, Description = Non-specific serine/threonine protein kinase, PFAM = PF03822;PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00004601ctg002_16682-27375' '(at5g57610 : 952.0) Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT1G16270.2); Has 119780 Blast hits to 118332 proteins in 4796 species: Archae - 124; Bacteria - 12838; Metazoa - 46034; Fungi - 10270; Plants - 32306; Viruses - 451; Other Eukaryotes - 17757 (source: NCBI BLink). & (gnl|cdd|35413 : 295.0) no description available & (gnl|cdd|87344 : 244.0) no description available & (q8lkz1|nork_pea : 94.4) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 1904.0) & (original description: Putative At5g57610, Description = Octicosapeptide/Phox/Bem1p domain-containing protein kinase, PFAM = PF00564;PF07714)' T '29.4' 'protein.postranslational modification' 'niben044scf00004782ctg013_1461-7135' '(at4g28560 : 406.0) encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Most similar to RIC6 and RIC8 (subfamily group II). Gene is expressed in all tissues examined.; ROP-interactive CRIB motif-containing protein 7 (RIC7); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G13230.1); Has 69989 Blast hits to 22570 proteins in 852 species: Archae - 23; Bacteria - 3729; Metazoa - 9129; Fungi - 406; Plants - 52718; Viruses - 0; Other Eukaryotes - 3984 (source: NCBI BLink). & (p93194|rpk1_iponi : 120.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35693 : 85.0) no description available & (reliability: 812.0) & (original description: Putative RIC7, Description = ROP-interactive CRIB motif-containing protein 7, PFAM = PF13855)' T '29.4' 'protein.postranslational modification' 'niben044scf00004793ctg000_910-11703' '(at1g29370 : 348.0) Kinase-related protein of unknown function (DUF1296); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1296 (InterPro:IPR009719); BEST Arabidopsis thaliana protein match is: Kinase-related protein of unknown function (DUF1296) (TAIR:AT1G29350.1); Has 14234 Blast hits to 8102 proteins in 480 species: Archae - 0; Bacteria - 599; Metazoa - 5712; Fungi - 1715; Plants - 1064; Viruses - 60; Other Eukaryotes - 5084 (source: NCBI BLink). & (gnl|cdd|70439 : 101.0) no description available & (reliability: 696.0) & (original description: Putative At1g29350, Description = Kinase-related protein, PFAM = PF06972)' T '29.4' 'protein.postranslational modification' 'niben044scf00005276ctg002_1-8293' '(at1g09020 : 463.0) putative activator subunit of SNF1-related protein kinase; homolog of yeast sucrose nonfermenting 4 (SNF4); CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase-related (TAIR:AT1G27070.1); Has 1379 Blast hits to 1368 proteins in 272 species: Archae - 14; Bacteria - 104; Metazoa - 613; Fungi - 295; Plants - 229; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|30346 : 113.0) no description available & (gnl|cdd|36975 : 94.7) no description available & (reliability: 926.0) & (original description: Putative SNF4, Description = 5'-AMP-activated protein kinase subunit gamma-2 prkag, PFAM = PF00571;PF16561)' T '29.4' 'protein.postranslational modification' 'niben044scf00005686ctg008_11935-26524' '(at4g35780 : 615.0) ACT-like protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Amino acid-binding ACT (InterPro:IPR002912), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ACT-like protein tyrosine kinase family protein (TAIR:AT2G17700.1); Has 132714 Blast hits to 130570 proteins in 5062 species: Archae - 147; Bacteria - 14500; Metazoa - 50865; Fungi - 12053; Plants - 33999; Viruses - 512; Other Eukaryotes - 20638 (source: NCBI BLink). & (gnl|cdd|35413 : 318.0) no description available & (gnl|cdd|87344 : 265.0) no description available & (q8lkz1|nork_pea : 116.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 1230.0) & (original description: Putative ACTK, Description = Serine/threonine-protein kinase HT1, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben044scf00005781ctg001_1-3074' '(at1g01140 : 243.0) Encodes a CBL-interacting protein kinase with similarity to SOS2; CBL-interacting protein kinase 9 (CIPK9); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 23 (TAIR:AT1G30270.1); Has 130572 Blast hits to 128490 proteins in 4426 species: Archae - 165; Bacteria - 15544; Metazoa - 48044; Fungi - 13206; Plants - 31490; Viruses - 522; Other Eukaryotes - 21601 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 201.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 486.0) & (original description: Putative sos2, Description = Non-specific serine/threonine protein kinase, PFAM = PF03822)' T '29.4' 'protein.postranslational modification' 'niben044scf00005903ctg007_2027-5280' '(at1g09840 : 268.0) shaggy-like protein kinase 41 (SK41); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: shaggy-like kinase 42 (TAIR:AT1G57870.2); Has 102931 Blast hits to 101896 proteins in 3684 species: Archae - 93; Bacteria - 10743; Metazoa - 37496; Fungi - 11700; Plants - 24573; Viruses - 362; Other Eukaryotes - 17964 (source: NCBI BLink). & (p51139|msk3_medsa : 237.0) Glycogen synthase kinase-3 homolog MsK-3 (EC 2.7.11.1) - Medicago sativa (Alfalfa) & (gnl|cdd|35877 : 202.0) no description available & (gnl|cdd|29142 : 82.6) no description available & (reliability: 536.0) & (original description: Putative trK, Description = Shaggy-related protein kinase theta, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00006036ctg000_766-4592' '(at3g51370 : 379.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), Protein phosphatase 2C (InterPro:IPR015655); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35919 : 264.0) no description available & (gnl|cdd|47660 : 104.0) no description available & (reliability: 758.0) & (original description: Putative pp2C2, Description = Serine/threonine phosphatase family, 2C domain protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben044scf00006152ctg002_1-7097' '(at3g02750 : 547.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G36250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35917 : 207.0) no description available & (gnl|cdd|29062 : 183.0) no description available & (reliability: 1094.0) & (original description: Putative F9H3, Description = Phosphatase 2C family protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben044scf00006361ctg002_1-10750' '(at2g27210 : 858.0) BRI1 suppressor 1 (BSU1)-like 3 (BSL3); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, iron ion binding, phosphoprotein phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Metallophosphoesterase (InterPro:IPR004843), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 2 (TAIR:AT1G08420.2). & (q2qm47|bsl2_orysa : 801.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35600 : 260.0) no description available & (reliability: 1688.0) & (original description: Putative BSL1, Description = Serine/threonine-protein phosphatase, PFAM = PF13418;PF13418;PF07646)' T '29.4' 'protein.postranslational modification' 'niben044scf00006575ctg004_1-6130' '(at3g59410 : 318.0) GCN2; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, translation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Anticodon-binding (InterPro:IPR004154), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), RWD (InterPro:IPR006575); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT3G02760.1). & (gnl|cdd|36253 : 178.0) no description available & (reliability: 636.0) & (original description: Putative GCN2, Description = Putative serine/threonine-protein kinase GCN2, PFAM = PF13393)' T '29.4' 'protein.postranslational modification' 'niben044scf00006867ctg003_1755-6438' '(at5g58320 : 223.0) Kinase interacting (KIP1-like) family protein; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT2G30500.2); Has 42357 Blast hits to 25393 proteins in 1812 species: Archae - 756; Bacteria - 4857; Metazoa - 21184; Fungi - 4124; Plants - 2465; Viruses - 154; Other Eukaryotes - 8817 (source: NCBI BLink). & (gnl|cdd|71206 : 130.0) no description available & (reliability: 446.0) & (original description: Putative NET4A, Description = Protein NETWORKED 4A, PFAM = PF07765)' T '29.4' 'protein.postranslational modification' 'niben044scf00007314ctg005_1-6588' '(at4g26100 : 568.0) Encodes a member of the casein kinase 1 protein family that is expressed in punctate particles at the cell periphery suggesting possible plasmodesmatal localization.; casein kinase 1 (CK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasmodesma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase I-like 12 (TAIR:AT5G57015.1); Has 62578 Blast hits to 62222 proteins in 2324 species: Archae - 33; Bacteria - 9966; Metazoa - 23829; Fungi - 6469; Plants - 10923; Viruses - 370; Other Eukaryotes - 10988 (source: NCBI BLink). & (gnl|cdd|36378 : 461.0) no description available & (gnl|cdd|29142 : 138.0) no description available & (reliability: 1136.0) & (original description: Putative CK1, Description = Casein kinase 1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00007373ctg012_1-11217' '(at1g22870 : 625.0) Protein kinase family protein with ARM repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-like helical (InterPro:IPR011989), Serine/threonine-protein kinase domain (InterPro:IPR002290), Armadillo-type fold (InterPro:IPR016024), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G71410.1); Has 26365 Blast hits to 24990 proteins in 1293 species: Archae - 12; Bacteria - 3236; Metazoa - 8918; Fungi - 4021; Plants - 3829; Viruses - 24; Other Eukaryotes - 6325 (source: NCBI BLink). & (gnl|cdd|37348 : 340.0) no description available & (reliability: 1250.0) & (original description: Putative At1g22870, Description = SCY1-like protein 2, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00007373ctg014_1-8200' '(at1g22870 : 327.0) Protein kinase family protein with ARM repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-like helical (InterPro:IPR011989), Serine/threonine-protein kinase domain (InterPro:IPR002290), Armadillo-type fold (InterPro:IPR016024), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G71410.1); Has 26365 Blast hits to 24990 proteins in 1293 species: Archae - 12; Bacteria - 3236; Metazoa - 8918; Fungi - 4021; Plants - 3829; Viruses - 24; Other Eukaryotes - 6325 (source: NCBI BLink). & (gnl|cdd|37348 : 194.0) no description available & (reliability: 654.0) & (original description: Putative At1g22870, Description = SCY1-like protein 2, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00007373ctg022_1823-4319' '(at1g71410 : 140.0) ARM repeat superfamily protein; FUNCTIONS IN: binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-type fold (InterPro:IPR016024), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein with ARM repeat domain (TAIR:AT1G22870.1); Has 32123 Blast hits to 30004 proteins in 1636 species: Archae - 12; Bacteria - 4500; Metazoa - 10601; Fungi - 4600; Plants - 4657; Viruses - 36; Other Eukaryotes - 7717 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative At1g22870, Description = Putative uncharacterized protein At1g71410, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben044scf00007599ctg001_210-2986' '(gnl|cdd|35419 : 284.0) no description available & (gnl|cdd|29142 : 250.0) no description available & (at5g55090 : 237.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 15 (MAPKKK15); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 16 (TAIR:AT4G26890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 126.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 474.0) & (original description: Putative BnaC08g12350D, Description = BnaC08g12350D protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00007694ctg019_1-2011' '(at4g27300 : 194.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT4G27290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 122.0) no description available & (reliability: 370.0) & (original description: Putative SRK, Description = Serine/threonine-protein kinase, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben044scf00007920ctg001_2899-11557' '(at1g53050 : 706.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G09600.1); Has 124596 Blast hits to 123234 proteins in 4130 species: Archae - 92; Bacteria - 13981; Metazoa - 46101; Fungi - 12764; Plants - 31065; Viruses - 453; Other Eukaryotes - 20140 (source: NCBI BLink). & (gnl|cdd|35820 : 640.0) no description available & (gnl|cdd|29142 : 254.0) no description available & (p24923|cdc21_medsa : 223.0) Cell division control protein 2 homolog 1 (EC 2.7.11.22) (EC 2.7.11.23) (Fragment) - Medicago sativa (Alfalfa) & (reliability: 1412.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00008100ctg003_2616-9048' '(at4g19110 : 484.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G45430.2); Has 112836 Blast hits to 111739 proteins in 3697 species: Archae - 107; Bacteria - 12214; Metazoa - 43480; Fungi - 11684; Plants - 25102; Viruses - 509; Other Eukaryotes - 19740 (source: NCBI BLink). & (gnl|cdd|35880 : 412.0) no description available & (gnl|cdd|29142 : 223.0) no description available & (q05006|cdc22_medsa : 172.0) Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Medicago sativa (Alfalfa) & (reliability: 968.0) & (original description: Putative MPK16, Description = MAP kinase, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00008100ctg003_3599-8313' '(at4g19110 : 565.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G45430.2); Has 112836 Blast hits to 111739 proteins in 3697 species: Archae - 107; Bacteria - 12214; Metazoa - 43480; Fungi - 11684; Plants - 25102; Viruses - 509; Other Eukaryotes - 19740 (source: NCBI BLink). & (gnl|cdd|35880 : 473.0) no description available & (gnl|cdd|29142 : 275.0) no description available & (q05006|cdc22_medsa : 213.0) Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Medicago sativa (Alfalfa) & (reliability: 1130.0) & (original description: Putative crk2, Description = Serine/threonine-protein kinase MAK, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00008185ctg018_13306-16907' '(at5g58380 : 432.0) Encodes a CBL-interacting protein kinase with similarity to SOS protein kinase.; SOS3-interacting protein 1 (SIP1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 2 (TAIR:AT5G07070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35803 : 241.0) no description available & (q6x4a2|cipk1_orysa : 236.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 227.0) no description available & (reliability: 864.0) & (original description: Putative LOC100381968, Description = Non-specific serine/threonine protein kinase, PFAM = PF03822;PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00008584ctg000_362-10843' '(at5g18700 : 1612.0) Encodes a microtubule-associated kinase-like protein RUNKEL (RUK). Contains a putative serine/threonine kinase domain and a microtubule-binding domain. RUK directly binds to microtubules in vitro and colocalizes with mitotic preprophase band, spindle, and phragmoplast in vivo. Required for cell plate expansion in cytokinesis.; Protein kinase family protein with ARM repeat domain; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Armadillo-like helical (InterPro:IPR011989), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G33940.2); Has 133671 Blast hits to 131461 proteins in 4761 species: Archae - 230; Bacteria - 15366; Metazoa - 49337; Fungi - 13216; Plants - 32681; Viruses - 728; Other Eukaryotes - 22113 (source: NCBI BLink). & (gnl|cdd|35817 : 620.0) no description available & (gnl|cdd|47550 : 253.0) no description available & (q5qn75|m2k1_orysa : 123.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 3224.0) & (original description: Putative RUK, Description = Serine/threonine-protein kinase RUNKEL, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00008866ctg002_13003-16683' '(at5g55090 : 342.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 15 (MAPKKK15); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 16 (TAIR:AT4G26890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35419 : 288.0) no description available & (gnl|cdd|29142 : 240.0) no description available & (q5qn75|m2k1_orysa : 107.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 684.0) & (original description: Putative MAPKKK15, Description = Mitogen-activated protein kinase kinase kinase 15, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00008935ctg000_1-12368' '(at1g73660 : 998.0) Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance.; protein tyrosine kinase family protein; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Ubiquitin interacting motif (InterPro:IPR003903), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18160.1); Has 126827 Blast hits to 124278 proteins in 4857 species: Archae - 98; Bacteria - 13376; Metazoa - 48156; Fungi - 11388; Plants - 33654; Viruses - 503; Other Eukaryotes - 19652 (source: NCBI BLink). & (gnl|cdd|35413 : 332.0) no description available & (gnl|cdd|87344 : 257.0) no description available & (q8lpb4|pskr_dauca : 105.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1996.0) & (original description: Putative MAPK, Description = Mitogen-activated protein kinase, PFAM = PF07714;PF14381)' T '29.4' 'protein.postranslational modification' 'niben044scf00009260ctg001_15290-33739' '(at3g15220 : 683.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytoplasm, spindle; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G53165.2); Has 133641 Blast hits to 131568 proteins in 4406 species: Archae - 196; Bacteria - 15456; Metazoa - 49688; Fungi - 12950; Plants - 32844; Viruses - 666; Other Eukaryotes - 21841 (source: NCBI BLink). & (gnl|cdd|35422 : 470.0) no description available & (gnl|cdd|29142 : 295.0) no description available & (q5qn75|m2k1_orysa : 151.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1354.0) & (original description: Putative stk25a, Description = Zgc:92836, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00009456ctg005_8759-14565' '(q75lr7|sapk1_orysa : 518.0) Serine/threonine-protein kinase SAPK1 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 1) - Oryza sativa (Rice) & (at1g78290 : 489.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to karrikin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G33950.1); Has 112604 Blast hits to 110873 proteins in 3029 species: Archae - 114; Bacteria - 13128; Metazoa - 41421; Fungi - 12195; Plants - 25871; Viruses - 459; Other Eukaryotes - 19416 (source: NCBI BLink). & (gnl|cdd|35803 : 299.0) no description available & (gnl|cdd|47550 : 270.0) no description available & (reliability: 978.0) & (original description: Putative SAPK1, Description = Serine/threonine-protein kinase SAPK1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00009549ctg015_1613-5292' '(at2g19130 : 866.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Apple-like (InterPro:IPR003609), PAN-1 domain (InterPro:IPR003014), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: receptor-like protein kinase 4 (TAIR:AT4G00340.1); Has 116366 Blast hits to 114909 proteins in 4332 species: Archae - 99; Bacteria - 12770; Metazoa - 42761; Fungi - 9470; Plants - 34242; Viruses - 402; Other Eukaryotes - 16622 (source: NCBI BLink). & (gnl|cdd|36401 : 322.0) no description available & (p07761|slsg6_braol : 260.0) S-locus-specific glycoprotein S6 precursor (SLSG-6) - Brassica oleracea (Wild cabbage) & (gnl|cdd|85147 : 164.0) no description available & (reliability: 1732.0) & (original description: Putative At2g19130, Description = G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130, PFAM = PF00069;PF00954;PF08276;PF01453)' T '29.4' 'protein.postranslational modification' 'niben044scf00009642ctg002_1252-2901' '(at5g60900 : 401.0) Encodes a receptor-like protein kinase.; receptor-like protein kinase 1 (RLK1); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: lectin protein kinase family protein (TAIR:AT1G34300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 311.0) no description available & (p17801|kpro_maize : 218.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 172.0) no description available & (reliability: 802.0) & (original description: Putative ACRE256, Description = Avr9/Cf-9 rapidly elicited protein 256, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00009707ctg005_15756-18598' '(gnl|cdd|58033 : 103.0) no description available & (gnl|cdd|35293 : 98.0) no description available & (at1g70490 : 96.3) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.; ARFA1D; FUNCTIONS IN: phospholipase activator activity, GTP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor 1 (TAIR:AT1G23490.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p51822|arf1_dauca : 95.9) ADP-ribosylation factor 1 - Daucus carota (Carrot) & (reliability: 192.6) & (original description: Putative arf1, Description = ADP-ribosylation factor 1, PFAM = PF00025)' T '29.4' 'protein.postranslational modification' 'niben044scf00009766ctg003_4269-9153' '(at3g05580 : 560.0) Calcineurin-like metallo-phosphoesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT5G27840.1); Has 7114 Blast hits to 6926 proteins in 613 species: Archae - 78; Bacteria - 489; Metazoa - 2408; Fungi - 1415; Plants - 981; Viruses - 10; Other Eukaryotes - 1733 (source: NCBI BLink). & (p48490|pp1_phavu : 551.0) Serine/threonine-protein phosphatase PP1 (EC 3.1.3.16) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|35595 : 445.0) no description available & (gnl|cdd|47495 : 397.0) no description available & (reliability: 1120.0) & (original description: Putative bimG, Description = Serine/threonine-protein phosphatase, PFAM = PF00149;PF16891)' T '29.4' 'protein.postranslational modification' 'niben044scf00009996ctg030_15090-19977' '(o24304|pfta_pea : 189.0) Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit (EC 2.5.1.58) (EC 2.5.1.59) (CAAX farnesyltransferase alpha subunit) (Ras proteins prenyltransferase alpha) (FTase-alpha) (Type I protein geranyl-geranyltransferas & (at3g59380 : 183.0) Encodes the alpha-subunit shared between protein farnesyltransferase and protein geranylgeranyltransferase-I. Involved in protein prenylation: covalent attachment of the C-15 isoprene farnesyl or the C-20 isoprene geranylgeranyl groups to the C-terminal end of some proteins. Involved in shoot and flower meristem homeostasis, and response to ABA and drought. Also regulates leaf cell shape. Mutant is epistatic to era1.; farnesyltransferase A (FTA); CONTAINS InterPro DOMAIN/s: Protein prenyltransferase (InterPro:IPR008940), Protein prenyltransferase, alpha subunit (InterPro:IPR002088); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase alpha subunit 1 (TAIR:AT4G24490.2); Has 1351 Blast hits to 1070 proteins in 249 species: Archae - 32; Bacteria - 58; Metazoa - 584; Fungi - 296; Plants - 191; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (gnl|cdd|35750 : 127.0) no description available & (reliability: 366.0) & (original description: Putative FTA, Description = Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, PFAM = PF01239)' T '29.4' 'protein.postranslational modification' 'niben044scf00010236ctg000_7521-16569' '(at2g17520 : 601.0) Encodes a endoribonuclease/protein kinase IRE1-like protein that is predicted to form a type I transmembrane protein structure and contain kinase/endoribonuclease domains at their C-terminal halves. The transcript levels for several ER-stress responsive genes, including six protein disulfide isomerases (PDIs), BiP2, and AtbZIP60 are not affected in ire1-2 null mutants.; IRE1A; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), KEN domain, ribonuclease activator (InterPro:IPR010513), PUG domain (InterPro:IPR006567), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: inositol requiring 1-1 (TAIR:AT5G24360.1); Has 104790 Blast hits to 103944 proteins in 4127 species: Archae - 110; Bacteria - 12550; Metazoa - 37627; Fungi - 10369; Plants - 27162; Viruses - 328; Other Eukaryotes - 16644 (source: NCBI BLink). & (gnl|cdd|36245 : 532.0) no description available & (gnl|cdd|69972 : 171.0) no description available & (reliability: 1202.0) & (original description: Putative IRE1B, Description = Serine/threonine-protein kinase/endoribonuclease IRE1b, PFAM = PF06479;PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00010399ctg010_9306-12286' '(at2g37550 : 325.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ARF-GAP domain 7 (AGD7); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 6 (TAIR:AT3G53710.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35923 : 231.0) no description available & (gnl|cdd|85433 : 143.0) no description available & (reliability: 650.0) & (original description: Putative v1g26599, Description = Predicted protein, PFAM = PF01412)' T '29.4' 'protein.postranslational modification' 'niben044scf00010455ctg015_1797-12802' '(at1g09020 : 621.0) putative activator subunit of SNF1-related protein kinase; homolog of yeast sucrose nonfermenting 4 (SNF4); CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase-related (TAIR:AT1G27070.1); Has 1379 Blast hits to 1368 proteins in 272 species: Archae - 14; Bacteria - 104; Metazoa - 613; Fungi - 295; Plants - 229; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36975 : 126.0) no description available & (gnl|cdd|73139 : 109.0) no description available & (reliability: 1242.0) & (original description: Putative SNF4, Description = Sucrose nonfermenting 4-like protein, PFAM = PF00571;PF00571)' T '29.4' 'protein.postranslational modification' 'niben044scf00010465ctg003_1-3134' '(at4g24400 : 213.0) Encodes a CBL (calcineurin B-like calcium sensor proteins) -interacting serine/threonine protein kinase. Regulates the low-affinity phase of the primary nitrate response.; CBL-interacting protein kinase 8 (CIPK8); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, response to nitrate, root development, response to glucose stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G35410.1); Has 132609 Blast hits to 130467 proteins in 4740 species: Archae - 192; Bacteria - 15427; Metazoa - 49318; Fungi - 12831; Plants - 32044; Viruses - 538; Other Eukaryotes - 22259 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 172.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 162.0) no description available & (gnl|cdd|47550 : 153.0) no description available & (reliability: 426.0) & (original description: Putative cipk, Description = Non-specific serine/threonine protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00010769ctg002_3309-7767' '(o04857|pp12_tobac : 573.0) Serine/threonine-protein phosphatase PP1 isozyme 2 (EC 3.1.3.16) - Nicotiana tabacum (Common tobacco) & (at5g59160 : 498.0) Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers.; type one serine/threonine protein phosphatase 2 (TOPP2); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: type one serine/threonine protein phosphatase 5 (TAIR:AT3G46820.1); Has 7217 Blast hits to 7021 proteins in 626 species: Archae - 78; Bacteria - 572; Metazoa - 2410; Fungi - 1415; Plants - 989; Viruses - 12; Other Eukaryotes - 1741 (source: NCBI BLink). & (gnl|cdd|35595 : 407.0) no description available & (gnl|cdd|47495 : 343.0) no description available & (reliability: 996.0) & (original description: Putative bimG, Description = Serine/threonine-protein phosphatase, PFAM = PF00149;PF16891)' T '29.4' 'protein.postranslational modification' 'niben044scf00011430ctg015_4464-9311' '(at1g64300 : 621.0) Protein kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF1221 (InterPro:IPR010632), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT5G41730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35413 : 205.0) no description available & (gnl|cdd|70237 : 195.0) no description available & (reliability: 1242.0) & (original description: Putative At5g41730, Description = Protein kinase, PFAM = PF06760;PF06760;PF07714)' T '29.4' 'protein.postranslational modification' 'niben044scf00011856ctg007_4666-8532' '(at5g57630 : 466.0) CBL-interacting protein kinase; CBL-interacting protein kinase 21 (CIPK21); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 23 (TAIR:AT1G30270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 374.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 312.0) no description available & (gnl|cdd|29142 : 282.0) no description available & (reliability: 932.0) & (original description: Putative CIPK21, Description = CBL-interacting serine/threonine-protein kinase 21, PFAM = PF03822;PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00011968ctg001_1-2685' '(at3g45100 : 110.0) encodes Arabidopsis homolog of a conserved protein involved in the first step of the GPI biosynthetic pathway.; SETH2; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: GPI anchor biosynthetic process, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PIGA, GPI anchor biosynthesis (InterPro:IPR013234), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G73160.1); Has 19927 Blast hits to 19902 proteins in 2481 species: Archae - 910; Bacteria - 15350; Metazoa - 164; Fungi - 171; Plants - 192; Viruses - 0; Other Eukaryotes - 3140 (source: NCBI BLink). & (gnl|cdd|36327 : 90.7) no description available & (reliability: 220.0) & (original description: Putative SETH2, Description = Phosphatidylinositol N-acetylglucosaminyltransferase subunit A, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben044scf00012347ctg000_52212-58664' '(at3g52890 : 654.0) KCBP-interacting protein kinase interacts specifically with the tail region of KCBP; KCBP-interacting protein kinase (KIPK); FUNCTIONS IN: protein binding, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G36350.1); Has 124693 Blast hits to 89359 proteins in 3581 species: Archae - 52; Bacteria - 15752; Metazoa - 49633; Fungi - 14477; Plants - 20322; Viruses - 421; Other Eukaryotes - 24036 (source: NCBI BLink). & (gnl|cdd|35830 : 606.0) no description available & (p47997|g11a_orysa : 520.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 170.0) no description available & (reliability: 1308.0) & (original description: Putative Os12g0480200, Description = Os12g0480200 protein, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00012381ctg001_5949-11696' '(at3g12620 : 546.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G55050.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35919 : 394.0) no description available & (gnl|cdd|29062 : 187.0) no description available & (reliability: 1092.0) & (original description: Putative pp2C2, Description = Serine/threonine phosphatase family, 2C domain protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben044scf00012569ctg007_2073-12587' '(at4g31860 : 428.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G25070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35918 : 178.0) no description available & (gnl|cdd|29062 : 163.0) no description available & (reliability: 856.0) & (original description: Putative ppm1g, Description = Protein phosphatase 2C, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben044scf00012581ctg016_7711-11594' '(at4g14480 : 465.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G14720.1); Has 121171 Blast hits to 119626 proteins in 3383 species: Archae - 90; Bacteria - 13775; Metazoa - 44497; Fungi - 12077; Plants - 30839; Viruses - 477; Other Eukaryotes - 19416 (source: NCBI BLink). & (gnl|cdd|35802 : 395.0) no description available & (gnl|cdd|29142 : 242.0) no description available & (q5qn75|m2k1_orysa : 110.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 930.0) & (original description: Putative BLUS1, Description = Serine/threonine-protein kinase BLUS1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00012758ctg003_29980-34788' '(at3g55270 : 508.0) MAP kinase phosphatase (MKP1); mitogen-activated protein kinase phosphatase 1 (MKP1); CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: MAPK phosphatase 2 (TAIR:AT3G06110.3); Has 4115 Blast hits to 4050 proteins in 297 species: Archae - 2; Bacteria - 48; Metazoa - 2335; Fungi - 439; Plants - 312; Viruses - 98; Other Eukaryotes - 881 (source: NCBI BLink). & (gnl|cdd|29029 : 167.0) no description available & (gnl|cdd|36928 : 149.0) no description available & (reliability: 1016.0) & (original description: Putative mkp1, Description = MAP kinase phosphatase 1, PFAM = PF00782;PF00626)' T '29.4' 'protein.postranslational modification' 'niben044scf00012918ctg006_1-6532' '(at4g18950 : 228.0) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Integrin-linked protein kinase (InterPro:IPR016253), Ankyrin repeat-containing domain (InterPro:IPR020683), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G58760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 134.0) no description available & (gnl|cdd|87344 : 112.0) no description available & (reliability: 448.0) & (original description: Putative PGSC0003DMG401030595, Description = Integrin-linked protein kinase family, PFAM = PF07714;PF12796)' T '29.4' 'protein.postranslational modification' 'niben044scf00013090ctg002_1301-9305' '(at5g03730 : 579.0) Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed.; CONSTITUTIVE TRIPLE RESPONSE 1 (CTR1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G24480.1); Has 126606 Blast hits to 124675 proteins in 4966 species: Archae - 112; Bacteria - 13843; Metazoa - 48138; Fungi - 11278; Plants - 33351; Viruses - 509; Other Eukaryotes - 19375 (source: NCBI BLink). & (gnl|cdd|35413 : 157.0) no description available & (gnl|cdd|87344 : 139.0) no description available & (reliability: 1158.0) & (original description: Putative CTR1, Description = Constitutive triple response 1, PFAM = PF14381;PF07714)' T '29.4' 'protein.postranslational modification' 'niben044scf00013327ctg002_20-8742' '(at1g72710 : 532.0) Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus.; casein kinase 1-like protein 2 (CKL2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase 1 (TAIR:AT4G26100.1); Has 69362 Blast hits to 63919 proteins in 2309 species: Archae - 34; Bacteria - 10202; Metazoa - 23661; Fungi - 6612; Plants - 12027; Viruses - 386; Other Eukaryotes - 16440 (source: NCBI BLink). & (gnl|cdd|36378 : 442.0) no description available & (gnl|cdd|29142 : 126.0) no description available & (reliability: 1064.0) & (original description: Putative ckl5, Description = Casein kinase I-like protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00013498ctg005_30-4782' '(at3g08760 : 538.0) Encodes an osmotic stress-inducible kinase that functions as a negative regulator of osmotic stress signaling in plants.; ATSIK; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G15080.1); Has 42849 Blast hits to 42385 proteins in 1619 species: Archae - 20; Bacteria - 2695; Metazoa - 11858; Fungi - 1356; Plants - 23776; Viruses - 143; Other Eukaryotes - 3001 (source: NCBI BLink). & (gnl|cdd|36401 : 256.0) no description available & (q8l4h4|nork_medtr : 145.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 111.0) no description available & (reliability: 1076.0) & (original description: Putative Os01g0822200, Description = Os01g0822200 protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben044scf00014039ctg007_1-8769' '(at3g13670 : 907.0) Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT2G25760.1); Has 17131 Blast hits to 17075 proteins in 1486 species: Archae - 12; Bacteria - 5943; Metazoa - 4767; Fungi - 1425; Plants - 2358; Viruses - 214; Other Eukaryotes - 2412 (source: NCBI BLink). & (gnl|cdd|36379 : 237.0) no description available & (gnl|cdd|29142 : 112.0) no description available & (reliability: 1814.0) & (original description: Putative Sb03g034340, Description = Putative uncharacterized protein Sb03g034340, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00014047ctg003_19470-24532' '(at1g48120 : 374.0) hydrolases;protein serine/threonine phosphatases; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Aminotransferase-like, plant mobile domain (InterPro:IPR019557), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: serine/threonine phosphatase 7 (TAIR:AT5G63870.1); Has 7651 Blast hits to 7316 proteins in 444 species: Archae - 82; Bacteria - 281; Metazoa - 2438; Fungi - 1339; Plants - 1824; Viruses - 2; Other Eukaryotes - 1685 (source: NCBI BLink). & (reliability: 748.0) & (original description: Putative At1g48120, Description = Serine/threonine-protein phosphatase 7 long form homolog, PFAM = PF10536)' T '29.4' 'protein.postranslational modification' 'niben044scf00014142ctg003_1064-11877' '(at4g02390 : 763.0) Encodes a DNA dependent nuclear poly (ADP-ribose) polymerase (E.C.2.4.2.30), thought to be involved in post-translational modification .; poly(ADP-ribose) polymerase (PP); FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity, nucleic acid binding; INVOLVED IN: protein amino acid ADP-ribosylation; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), WGR (InterPro:IPR008893), Poly(ADP-ribose) polymerase, regulatory domain (InterPro:IPR004102), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317); BEST Arabidopsis thaliana protein match is: poly(ADP-ribose) polymerase 2 (TAIR:AT2G31320.1); Has 1052 Blast hits to 1033 proteins in 170 species: Archae - 0; Bacteria - 15; Metazoa - 556; Fungi - 107; Plants - 166; Viruses - 5; Other Eukaryotes - 203 (source: NCBI BLink). & (o50017|parp2_maize : 758.0) Poly [ADP-ribose] polymerase 2 (EC 2.4.2.30) (PARP-2) (ADPRT 2) (NAD(+) ADP-ribosyltransferase 2) (Poly[ADP-ribose] synthetase 2) - Zea mays (Maize) & (gnl|cdd|30068 : 462.0) no description available & (gnl|cdd|36255 : 350.0) no description available & (reliability: 1526.0) & (original description: Putative PARP2, Description = Poly [ADP-ribose] polymerase 2, PFAM = PF02877;PF05406;PF02037;PF02037;PF00644)' T '29.4' 'protein.postranslational modification' 'niben044scf00014162ctg000_20988-26378' '(at1g73460 : 460.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane, cytoplasm; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G73450.1); Has 92811 Blast hits to 90539 proteins in 3072 species: Archae - 97; Bacteria - 11008; Metazoa - 34744; Fungi - 12175; Plants - 16778; Viruses - 387; Other Eukaryotes - 17622 (source: NCBI BLink). & (reliability: 920.0) & (original description: Putative At1g73450, Description = Putative serine/threonine-protein kinase dyrk2, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben044scf00014287ctg007_4534-10285' '(at1g47380 : 640.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G68410.2); Has 5162 Blast hits to 5161 proteins in 415 species: Archae - 0; Bacteria - 290; Metazoa - 1152; Fungi - 442; Plants - 2230; Viruses - 7; Other Eukaryotes - 1041 (source: NCBI BLink). & (gnl|cdd|29062 : 148.0) no description available & (gnl|cdd|35917 : 146.0) no description available & (reliability: 1280.0) & (original description: Putative BnaC05g06690D, Description = BnaC05g06690D protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben044scf00014327ctg007_1-2998' '(at3g60340 : 111.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: palmitoyl-(protein) hydrolase activity; INVOLVED IN: protein modification process; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Palmitoyl protein thioesterase (InterPro:IPR002472); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G47330.1); Has 611 Blast hits to 607 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 315; Fungi - 98; Plants - 140; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|37752 : 105.0) no description available & (reliability: 206.0) & (original description: Putative PPTE, Description = Palmitoyl protein thioesterase family protein, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben044scf00015066ctg007_752-4919' '(at3g02800 : 261.0) Tyrosine phosphatase family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic (InterPro:IPR020428), Protein-tyrosine phosphatase, SIW14-like (InterPro:IPR004861); BEST Arabidopsis thaliana protein match is: Phosphotyrosine protein phosphatases superfamily protein (TAIR:AT5G16480.1); Has 721 Blast hits to 711 proteins in 161 species: Archae - 0; Bacteria - 73; Metazoa - 5; Fungi - 358; Plants - 145; Viruses - 0; Other Eukaryotes - 140 (source: NCBI BLink). & (gnl|cdd|36785 : 210.0) no description available & (gnl|cdd|86260 : 177.0) no description available & (reliability: 510.0) & (original description: Putative At3g02800, Description = Atypical dual-specificity phosphatase, PFAM = PF03162)' T '29.4' 'protein.postranslational modification' 'niben044scf00015285ctg007_5783-14062' '(at3g20860 : 418.0) Encodes a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.; NIMA-related kinase 5 (NEK5); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: NIMA (never in mitosis, gene A)-related 6 (TAIR:AT3G44200.1); Has 126562 Blast hits to 124209 proteins in 4357 species: Archae - 139; Bacteria - 14378; Metazoa - 47141; Fungi - 12363; Plants - 31069; Viruses - 498; Other Eukaryotes - 20974 (source: NCBI BLink). & (gnl|cdd|35809 : 370.0) no description available & (gnl|cdd|29142 : 259.0) no description available & (q5qn75|m2k1_orysa : 115.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 836.0) & (original description: Putative stkc, Description = Serine/threonine-protein kinase Nek5, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00016217ctg008_22829-25870' '(at3g22790 : 304.0) Kinase interacting (KIP1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: kinase interacting (KIP1-like) family protein (TAIR:AT4G14760.1); Has 216725 Blast hits to 82224 proteins in 3436 species: Archae - 3482; Bacteria - 43267; Metazoa - 93913; Fungi - 17447; Plants - 11833; Viruses - 1017; Other Eukaryotes - 45766 (source: NCBI BLink). & (reliability: 608.0) & (original description: Putative PGSC0003DMG400007687, Description = Kinase interacting family protein, putative, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben044scf00016397ctg002_42288-50107' '(at1g72770 : 454.0) mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2C; regulates the activation of the Snf1-related kinase OST1 by abscisic acid.; homology to ABI1 (HAB1); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: homology to ABI2 (TAIR:AT1G17550.1). & (gnl|cdd|35917 : 248.0) no description available & (gnl|cdd|29062 : 237.0) no description available & (reliability: 908.0) & (original description: Putative abi1B, Description = Protein phosphatase 2C 16, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben044scf00016437ctg011_8296-11482' '(at4g18593 : 126.0) dual specificity protein phosphatase-related; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative dusp12, Description = Dual specificity protein phosphatase 12, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben044scf00016621ctg001_1-12610' '(at4g15415 : 719.0) B' regulatory subunit of PP2A (AtB'gamma); ATB' GAMMA; FUNCTIONS IN: poly(U) RNA binding, protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: protein phosphatase type 2A complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT3G21650.1); Has 1169 Blast hits to 1162 proteins in 197 species: Archae - 0; Bacteria - 4; Metazoa - 568; Fungi - 149; Plants - 302; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink). & (gnl|cdd|85563 : 713.0) no description available & (gnl|cdd|37296 : 647.0) no description available & (reliability: 1438.0) & (original description: Putative B'GAMMA, Description = Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform, PFAM = PF01603)' T '29.4' 'protein.postranslational modification' 'niben044scf00016625ctg004_3884-6494' '(at3g02800 : 115.0) Tyrosine phosphatase family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic (InterPro:IPR020428), Protein-tyrosine phosphatase, SIW14-like (InterPro:IPR004861); BEST Arabidopsis thaliana protein match is: Phosphotyrosine protein phosphatases superfamily protein (TAIR:AT5G16480.1); Has 721 Blast hits to 711 proteins in 161 species: Archae - 0; Bacteria - 73; Metazoa - 5; Fungi - 358; Plants - 145; Viruses - 0; Other Eukaryotes - 140 (source: NCBI BLink). & (gnl|cdd|36785 : 104.0) no description available & (gnl|cdd|86260 : 86.9) no description available & (reliability: 218.0) & (original description: Putative PTP, Description = Tyrosine specific protein phosphatase family protein, PFAM = PF03162)' T '29.4' 'protein.postranslational modification' 'niben044scf00017106ctg007_1-7136' '(at2g26980 : 723.0) encodes a serine-threonine protein kinase whose expression increases in response to abscisic acid, cold, drought, high salt, and wounding conditions. The gene is expressed in developing seeds and seedlings. Lines carrying a T-DNA insertions have reduced germination efficiency and expression of cold, high-salt, and abscisic acid marker genes are altered, but not drought-response markers.; CBL-interacting protein kinase 3 (CIPK3); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Ca2+regulated serine-threonine protein kinase family protein (TAIR:AT5G21326.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 668.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 360.0) no description available & (gnl|cdd|29142 : 298.0) no description available & (reliability: 1446.0) & (original description: Putative CIPK3, Description = CBL-interacting serine/threonine-protein kinase 3, PFAM = PF03822;PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00017223ctg010_1-2828' '(at4g24730 : 459.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transporter, high affinity nitrate, Nar2 (InterPro:IPR016605); BEST Arabidopsis thaliana protein match is: nitrate transmembrane transporters (TAIR:AT5G50200.1). & (reliability: 918.0) & (original description: Putative Os07g0688000, Description = Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'niben044scf00017399ctg007_1-2396' '(at5g23720 : 104.0) Encodes a protein tyrosine phosphatase Propyzamide-Hypersensitive 1 (PHS1). One of the mutant alleles, phs1-1, is hypersensitive to the microtubule-destabilizing drug propyzamide, suggesting that PHS1 may be involved in phosphorylation cascades that control the dynamics of cortical microtubules in plant cells. A second allele, phs1-3, is hypersensitive to abscisic acid, indicating a possible involvement of PHS1 in ABA signalling.; PROPYZAMIDE-HYPERSENSITIVE 1 (PHS1); FUNCTIONS IN: protein tyrosine/serine/threonine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: cortical microtubule organization, regulation of gene expression, response to abscisic acid stimulus, regulation of stomatal movement; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422), Protein kinase-like domain (InterPro:IPR011009), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Actin-fragmin kinase, catalytic (InterPro:IPR015275), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340); BEST Arabidopsis thaliana protein match is: dual specificity protein phosphatase 1 (TAIR:AT3G23610.2); Has 3765 Blast hits to 3755 proteins in 331 species: Archae - 11; Bacteria - 94; Metazoa - 2032; Fungi - 332; Plants - 347; Viruses - 172; Other Eukaryotes - 777 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative PHS1, Description = Dual specificity phosphatase family protein, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben044scf00017482ctg000_32656-42229' '(at3g58760 : 464.0) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT4G18950.1); Has 165609 Blast hits to 134537 proteins in 4793 species: Archae - 244; Bacteria - 16399; Metazoa - 69591; Fungi - 13531; Plants - 33415; Viruses - 845; Other Eukaryotes - 31584 (source: NCBI BLink). & (gnl|cdd|35413 : 244.0) no description available & (gnl|cdd|87344 : 198.0) no description available & (q6x4a2|cipk1_orysa : 112.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 928.0) & (original description: Putative APK1, Description = Ankyrin-kinase protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben044scf00017807ctg022_1-5472' '(at3g15260 : 428.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G28400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35917 : 241.0) no description available & (gnl|cdd|29062 : 215.0) no description available & (reliability: 856.0) & (original description: Putative At3g15260, Description = Probable protein phosphatase 2C 39, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben044scf00018364ctg004_3541-11312' '(at5g22050 : 258.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G19300.1); Has 22508 Blast hits to 22253 proteins in 395 species: Archae - 4; Bacteria - 69; Metazoa - 1187; Fungi - 17; Plants - 20721; Viruses - 19; Other Eukaryotes - 491 (source: NCBI BLink). & (gnl|cdd|36401 : 166.0) no description available & (o24585|cri4_maize : 97.4) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 516.0) & (original description: Putative At5g22050, Description = Protein kinase family protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben044scf00018463ctg036_4614-10863' '(at3g10572 : 234.0) 3-phosphoinositide-dependent protein kinase-1, putative; Has 32 Blast hits to 32 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative PGSC0003DMG400006457, Description = 3-phosphoinositide-dependent protein kinase-1, putative, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben044scf00018495ctg001_1435-5932' '(at5g20930 : 90.1) Nuclear serine/threonine protein kinase that requires a coiled-coil region for oligomerization and catalytic activity. Required for leaf and flower development. Expression localized to the developing style by stage 13.; TOUSLED (TSL); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ataurora3 (TAIR:AT2G45490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative TSL, Description = Serine/threonine-protein kinase TOUSLED, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben044scf00018539ctg002_1-7748' '(at1g03080 : 872.0) kinase interacting (KIP1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053), KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT3G22790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35383 : 118.0) no description available & (gnl|cdd|71206 : 94.6) no description available & (reliability: 1744.0) & (original description: Putative NET1C, Description = BnaA09g01010D protein, PFAM = PF07765)' T '29.4' 'protein.postranslational modification' 'niben044scf00018784ctg009_251-1931' '(at4g14340 : 103.0) Phosphorylates serine or threonine residues that are near and C-terminal to acidic side chains on a variety of target proteins; casein kinase I (CKI1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase I-like 10 (TAIR:AT3G23340.1); Has 58467 Blast hits to 58136 proteins in 2224 species: Archae - 39; Bacteria - 9706; Metazoa - 21949; Fungi - 6340; Plants - 9653; Viruses - 309; Other Eukaryotes - 10471 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative ckl8, Description = Casein kinase I-like protein, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben044scf00018784ctg010_1-5818' '(at3g23340 : 595.0) casein kinase I-like 10 (ckl10); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase I (TAIR:AT4G14340.1); Has 56550 Blast hits to 56234 proteins in 2232 species: Archae - 39; Bacteria - 9117; Metazoa - 21673; Fungi - 6267; Plants - 8804; Viruses - 331; Other Eukaryotes - 10319 (source: NCBI BLink). & (gnl|cdd|36378 : 466.0) no description available & (gnl|cdd|29142 : 143.0) no description available & (reliability: 1190.0) & (original description: Putative ADK1, Description = Casein kinase 1-like protein 9a, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00019339ctg031_1-2158' '(at3g53570 : 199.0) a member of a CDC2-related kinase subfamily, the LAMMER kinases. activates STE12-dependent functions in yeast.; FUS3-complementing gene 1 (FC1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: FUS3-complementing gene 2 (TAIR:AT4G24740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35890 : 133.0) no description available & (reliability: 398.0) & (original description: Putative AFC1, Description = Serine/threonine-protein kinase AFC2, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben044scf00019485ctg015_1-5814' '(at4g11260 : 380.0) Functions in plant disease resistance signaling, SCF(TIR1) mediated degradation of Aux/IAA proteins and HSP90 mediated degradation of R resistance proteins. AtSGT1a and AtSGT1b are functionally redundant in the resistance to pathogenes. AtSGT1b was more highly expressed than AtSGT1. The N-terminal TPR domain of AtSGT1a reduces the steady-state level of Arabidopsis SGT1 proteins whereas the same domain from AtSGT1b enhances SGT1 accumulation. The TPR domain is dispensable for SGT1 resistance.; SGT1B; FUNCTIONS IN: protein binding; INVOLVED IN: in 6 processes; LOCATED IN: SCF ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), Tetratricopeptide-like helical (InterPro:IPR011990), SGS (InterPro:IPR007699), Tetratricopeptide repeat-containing (InterPro:IPR013026), HSP20-like chaperone (InterPro:IPR008978), Tetratricopeptide repeat (InterPro:IPR019734), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: phosphatase-related (TAIR:AT4G23570.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36523 : 231.0) no description available & (gnl|cdd|34694 : 111.0) no description available & (reliability: 760.0) & (original description: Putative SGT1, Description = Protein SGT1 homolog, PFAM = PF13181;PF13181;PF04969;PF05002)' T '29.4' 'protein.postranslational modification' 'niben044scf00019632ctg004_963-7216' '(at4g32250 : 781.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: protein kinases;ubiquitin-protein ligases (TAIR:AT5G13530.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35419 : 149.0) no description available & (gnl|cdd|29142 : 138.0) no description available & (reliability: 1562.0) & (original description: Putative BnaC01g06260D, Description = BnaC01g06260D protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben044scf00019800ctg006_4742-11893' '(at2g27210 : 708.0) BRI1 suppressor 1 (BSU1)-like 3 (BSL3); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, iron ion binding, phosphoprotein phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Metallophosphoesterase (InterPro:IPR004843), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 2 (TAIR:AT1G08420.2). & (q2qm47|bsl2_orysa : 706.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35595 : 348.0) no description available & (gnl|cdd|29063 : 294.0) no description available & (reliability: 1408.0) & (original description: Putative TOPP1, Description = Serine/threonine-protein phosphatase PP1 isozyme 1, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'niben044scf00019800ctg008_1732-5049' '(at2g27210 : 380.0) BRI1 suppressor 1 (BSU1)-like 3 (BSL3); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, iron ion binding, phosphoprotein phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Metallophosphoesterase (InterPro:IPR004843), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 2 (TAIR:AT1G08420.2). & (q2qm47|bsl2_orysa : 351.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35600 : 162.0) no description available & (reliability: 756.0) & (original description: Putative BSL1, Description = Serine/threonine-protein phosphatase, PFAM = PF13418)' T '29.4' 'protein.postranslational modification' 'niben044scf00019855ctg000_5107-8417' '(at3g23000 : 410.0) Encodes a serine/threonine protein kinase with similarities to CBL-interacting protein kinases, SNF1 and SOS2.; CBL-interacting protein kinase 7 (CIPK7); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to fructose stimulus, response to sucrose stimulus, response to glucose stimulus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 4 (TAIR:AT4G14580.1); Has 129268 Blast hits to 127250 proteins in 4353 species: Archae - 172; Bacteria - 15520; Metazoa - 47044; Fungi - 13122; Plants - 31560; Viruses - 528; Other Eukaryotes - 21322 (source: NCBI BLink). & (gnl|cdd|35803 : 303.0) no description available & (q6x4a2|cipk1_orysa : 301.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|29142 : 272.0) no description available & (reliability: 820.0) & (original description: Putative CIPK7, Description = CBL-interacting serine/threonine-protein kinase 7, PFAM = PF03822;PF00069;PF12330)' T '29.4' 'protein.postranslational modification' 'niben044scf00020113ctg004_1-4535' '(q2qm47|bsl2_orysa : 678.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (at2g27210 : 677.0) BRI1 suppressor 1 (BSU1)-like 3 (BSL3); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, iron ion binding, phosphoprotein phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Metallophosphoesterase (InterPro:IPR004843), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 2 (TAIR:AT1G08420.2). & (gnl|cdd|35595 : 346.0) no description available & (gnl|cdd|47495 : 295.0) no description available & (reliability: 1348.0) & (original description: Putative GLC7, Description = Serine/threonine-protein phosphatase PP1-2, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'niben044scf00020365ctg012_1586-6293' '(at4g14480 : 83.2) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G14720.1); Has 121171 Blast hits to 119626 proteins in 3383 species: Archae - 90; Bacteria - 13775; Metazoa - 44497; Fungi - 12077; Plants - 30839; Viruses - 477; Other Eukaryotes - 19416 (source: NCBI BLink). & (gnl|cdd|35802 : 80.5) no description available & (reliability: 166.4) & (original description: Putative PGSC0003DMG400007002, Description = Arsenical pump-driving ATPase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00020459ctg005_2523-9647' '(at1g73670 : 657.0) member of MAP Kinase; MAP kinase 15 (MPK15); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18150.3); Has 118424 Blast hits to 117259 proteins in 3821 species: Archae - 110; Bacteria - 13457; Metazoa - 43793; Fungi - 12258; Plants - 28693; Viruses - 571; Other Eukaryotes - 19542 (source: NCBI BLink). & (q5z9j0|mpk12_orysa : 640.0) Mitogen-activated protein kinase 12 (EC 2.7.11.24) (MAP kinase 12) (OsBWMK1) (Blast- and wound-induced MAP kinase 1) (MAP kinase 1) (OsMAPK1) - Oryza sativa (Rice) & (gnl|cdd|35879 : 456.0) no description available & (gnl|cdd|29142 : 258.0) no description available & (reliability: 1264.0) & (original description: Putative MPK11, Description = MAP kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00020854ctg003_250-7046' '(at3g53030 : 674.0) Encodes a protein kinase SRPK4 that specifically targets Arabidopsis Ser/Arg-rich (SR) slicing factors involved in RNA metabolism. In vitro kinase assay showed that SRPK4 phosphorylates the SR protein RSp31.; ser/arg-rich protein kinase 4 (SRPK4); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: response to oxidative stress, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G44850.1); Has 38460 Blast hits to 29477 proteins in 1034 species: Archae - 2; Bacteria - 1392; Metazoa - 15648; Fungi - 7270; Plants - 6510; Viruses - 16; Other Eukaryotes - 7622 (source: NCBI BLink). & (gnl|cdd|36504 : 662.0) no description available & (gnl|cdd|29142 : 98.7) no description available & (reliability: 1348.0) & (original description: Putative dsk1, Description = Protein kinase dsk1, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00020903ctg004_6024-11753' '(q9xgh7|pp2a_tobac : 257.0) Serine/threonine-protein phosphatase PP2A catalytic subunit (EC 3.1.3.16) - Nicotiana tabacum (Common tobacco) & (at3g58500 : 253.0) Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].; protein phosphatase 2A-4 (PP2A-4); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A-3 (TAIR:AT2G42500.1); Has 6816 Blast hits to 6628 proteins in 481 species: Archae - 80; Bacteria - 203; Metazoa - 2402; Fungi - 1409; Plants - 984; Viruses - 3; Other Eukaryotes - 1735 (source: NCBI BLink). & (gnl|cdd|35592 : 229.0) no description available & (gnl|cdd|29063 : 194.0) no description available & (reliability: 506.0) & (original description: Putative mts, Description = Serine/threonine-protein phosphatase, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'niben044scf00021268ctg009_24999-31283' '(at3g56490 : 224.0) Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro.; HIS triad family protein 3 (HIT3); FUNCTIONS IN: protein kinase C binding, adenylylsulfatase activity, zinc ion binding; INVOLVED IN: sulfur metabolic process, purine ribonucleotide metabolic process; LOCATED IN: peroxisome, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808), Histidine triad (HIT) protein (InterPro:IPR001310), Histidine triad motif (InterPro:IPR011151); BEST Arabidopsis thaliana protein match is: HISTIDINE TRIAD NUCLEOTIDE-BINDING 2 (TAIR:AT1G31160.1); Has 7957 Blast hits to 7956 proteins in 2592 species: Archae - 148; Bacteria - 4849; Metazoa - 343; Fungi - 139; Plants - 127; Viruses - 0; Other Eukaryotes - 2351 (source: NCBI BLink). & (p42856|zb14_maize : 205.0) 14 kDa zinc-binding protein (Protein kinase C inhibitor) (PKCI) - Zea mays (Maize) & (gnl|cdd|38485 : 176.0) no description available & (gnl|cdd|29589 : 147.0) no description available & (reliability: 448.0) & (original description: Putative HINT1, Description = Adenylylsulfatase HINT1, PFAM = PF01230)' T '29.4' 'protein.postranslational modification' 'niben044scf00021786ctg019_1-5090' '(at5g50000 : 665.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G01490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35413 : 319.0) no description available & (gnl|cdd|87344 : 232.0) no description available & (p17801|kpro_maize : 95.1) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 1330.0) & (original description: Putative Raf33, Description = BnaA03g56980D protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben044scf00021843ctg000_669-2308' '(at1g74330 : 87.4) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18670.1); Has 123506 Blast hits to 122083 proteins in 4340 species: Archae - 90; Bacteria - 13489; Metazoa - 46875; Fungi - 12167; Plants - 30576; Viruses - 455; Other Eukaryotes - 19854 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative Os07g0596600, Description = Putative serine/threonine-protein kinase, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben044scf00022220ctg004_1-3146' '(at3g53570 : 268.0) a member of a CDC2-related kinase subfamily, the LAMMER kinases. activates STE12-dependent functions in yeast.; FUS3-complementing gene 1 (FC1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: FUS3-complementing gene 2 (TAIR:AT4G24740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35890 : 195.0) no description available & (gnl|cdd|47550 : 88.0) no description available & (reliability: 536.0) & (original description: Putative FC1, Description = Serine/threonine-protein kinase AFC1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00022228ctg009_12706-16541' '(at1g68830 : 333.0) STN7 protein kinase; required for state transitions, phosphorylation of the major antenna complex (LHCII) between PSII and PSI, and light adaptation; STT7 homolog STN7 (STN7); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: regulation of photosynthesis, light reaction, circadian rhythm; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B1;2 (TAIR:AT2G38620.2); Has 29571 Blast hits to 29413 proteins in 1565 species: Archae - 57; Bacteria - 3753; Metazoa - 11524; Fungi - 3757; Plants - 4496; Viruses - 50; Other Eukaryotes - 5934 (source: NCBI BLink). & (q84v18|stt7_chlre : 80.1) Serine/threonine-protein kinase stt7, chloroplast precursor (EC 2.7.11.1) - Chlamydomonas reinhardtii & (reliability: 666.0) & (original description: Putative STN7, Description = Serine/threonine-protein kinase stt7, chloroplastic, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben044scf00022709ctg007_15511-21339' '(at5g67380 : 232.0) casein kinase II catalytic subunit alpha; casein kinase alpha 1 (CKA1); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase II, alpha chain 2 (TAIR:AT3G50000.1); Has 73369 Blast hits to 72658 proteins in 2362 species: Archae - 60; Bacteria - 7223; Metazoa - 28693; Fungi - 10783; Plants - 10981; Viruses - 246; Other Eukaryotes - 15383 (source: NCBI BLink). & (gnl|cdd|35887 : 189.0) no description available & (p28523|csk2a_maize : 177.0) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II) (CK2-alpha) - Zea mays (Maize) & (gnl|cdd|84488 : 96.1) no description available & (reliability: 464.0) & (original description: Putative casK, Description = Casein kinase II subunit alpha, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00023041ctg001_10135-19189' '(at1g03080 : 933.0) kinase interacting (KIP1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053), KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT3G22790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71206 : 132.0) no description available & (gnl|cdd|35383 : 124.0) no description available & (reliability: 1866.0) & (original description: Putative NET1C, Description = Kinase interacting protein 1-like, PFAM = PF07765)' T '29.4' 'protein.postranslational modification' 'niben044scf00023108ctg003_1-6933' '(at1g18670 : 827.0) Encodes a cyclin-dependent kinase-like protein with a ser/thr protein kinase domain and an N-terminal myristoylation sequence. Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do.; IMPAIRED IN BABA-INDUCED STERILITY 1 (IBS1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G74330.2); Has 121773 Blast hits to 120368 proteins in 4310 species: Archae - 86; Bacteria - 13259; Metazoa - 45481; Fungi - 12893; Plants - 29647; Viruses - 443; Other Eukaryotes - 19964 (source: NCBI BLink). & (gnl|cdd|35820 : 612.0) no description available & (gnl|cdd|29142 : 257.0) no description available & (q38772|cdc2a_antma : 220.0) Cell division control protein 2 homolog A (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (reliability: 1654.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00023238ctg004_3143-7134' '(q6ret7|ccamk_medtr : 273.0) Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3 (EC 2.7.11.17) (Does not make infections protein 3) (CCaMK DMI3) (MtCCaMK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47550 : 170.0) no description available & (gnl|cdd|35255 : 168.0) no description available & (at5g12180 : 134.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 17 (CPK17); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of pollen tube growth, protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 34 (TAIR:AT5G19360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative DMI3, Description = Calcium/calmodulin dependent protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00023313ctg019_1-5409' '(at5g28850 : 654.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G28900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37773 : 509.0) no description available & (reliability: 1308.0) & (original description: Putative P2R3B, Description = Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, PFAM = PF13499)' T '29.4' 'protein.postranslational modification' 'niben044scf00023313ctg021_1-1063' '(at5g28850 : 107.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G28900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37773 : 88.5) no description available & (reliability: 214.0) & (original description: Putative B''ALPHA, Description = Calcium-binding EF-hand, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben044scf00023439ctg004_7488-17155' '(at1g03920 : 686.0) Protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT2G20470.1); Has 109567 Blast hits to 108299 proteins in 4009 species: Archae - 130; Bacteria - 13646; Metazoa - 38992; Fungi - 11695; Plants - 26009; Viruses - 442; Other Eukaryotes - 18653 (source: NCBI BLink). & (gnl|cdd|35825 : 644.0) no description available & (gnl|cdd|47550 : 247.0) no description available & (p47997|g11a_orysa : 139.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 1372.0) & (original description: Putative ndrA, Description = Serine/threonine-protein kinase CBK1, PFAM = PF00433;PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00023727ctg000_2821-9146' '(at4g24740 : 677.0) a LAMMER-type protein kinase that co-precipitates with serine/arginine-rich (SR) proteins in vitro, interaction modulated by phosphorylation of the proteins.; FUS3-complementing gene 2 (FC2); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: FUS3-complementing gene 1 (TAIR:AT3G53570.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35890 : 504.0) no description available & (gnl|cdd|47550 : 195.0) no description available & (p23111|cdc2_maize : 115.0) Cell division control protein 2 homolog (EC 2.7.11.22) (EC 2.7.11.23) (p34cdc2) - Zea mays (Maize) & (reliability: 1354.0) & (original description: Putative AFC2, Description = Serine/threonine-protein kinase AFC2, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00023757ctg009_15719-24502' '(at2g35350 : 481.0) Encodes a protein most similar to the POLTERGEIST locus. Double mutant analysis of loss of function alleles indicate PLL1 functions redundantly with POL to regulate meristem size and pedicel length. Acts in a dose dependent manner with POL to suppress the clv1, clv2 and clv3 phenotypes.; poltergeist like 1 (PLL1); FUNCTIONS IN: phospholipid binding, protein serine/threonine phosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G46920.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35919 : 278.0) no description available & (gnl|cdd|29062 : 123.0) no description available & (reliability: 962.0) & (original description: Putative PLL1, Description = Protein phosphatase 2C 29, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben044scf00023771ctg000_759-4480' '(gnl|cdd|35830 : 538.0) no description available & (at2g26700 : 506.0) Encodes PID2, a homolog of PID. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons.; PINOID2 (PID2); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 2 (TAIR:AT5G47750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p47997|g11a_orysa : 374.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 203.0) no description available & (reliability: 1012.0) & (original description: Putative PID2, Description = Protein kinase PINOID 2, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00024071ctg000_12156-23530' '(at1g10430 : 636.0) Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].; protein phosphatase 2A-2 (PP2A-2); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A-2 (TAIR:AT1G59830.1); Has 6751 Blast hits to 6569 proteins in 471 species: Archae - 80; Bacteria - 183; Metazoa - 2378; Fungi - 1410; Plants - 970; Viruses - 5; Other Eukaryotes - 1725 (source: NCBI BLink). & (q9zse4|pp2a_hevbr : 629.0) Serine/threonine-protein phosphatase PP2A catalytic subunit (EC 3.1.3.16) - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|35592 : 550.0) no description available & (gnl|cdd|29063 : 376.0) no description available & (reliability: 1272.0) & (original description: Putative PP2A2, Description = Serine/threonine-protein phosphatase PP2A-2 catalytic subunit, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'niben044scf00024440ctg011_85-4405' '(at5g59740 : 123.0) UDP-N-acetylglucosamine (UAA) transporter family; FUNCTIONS IN: galactose transmembrane transporter activity; INVOLVED IN: transmembrane transport; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: UDP-galactose transporter 5 (TAIR:AT3G46180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative UTR5, Description = UDP-galactose/UDP-glucose transporter 5B, PFAM = PF08449)' T '29.4' 'protein.postranslational modification' 'niben044scf00024654ctg002_3479-7304' '(at5g57035 : 130.0) U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination, response to stress; LOCATED IN: ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT2G19410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30176 : 106.0) no description available & (reliability: 260.0) & (original description: Putative BnaA07g01480D, Description = BnaA07g01480D protein, PFAM = PF00582)' T '29.4' 'protein.postranslational modification' 'niben044scf00025065ctg004_6700-14015' '(at1g63500 : 744.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G41260.1); Has 34543 Blast hits to 34010 proteins in 1386 species: Archae - 8; Bacteria - 2627; Metazoa - 7585; Fungi - 183; Plants - 22470; Viruses - 98; Other Eukaryotes - 1572 (source: NCBI BLink). & (gnl|cdd|36401 : 190.0) no description available & (o24585|cri4_maize : 98.2) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 97.2) no description available & (reliability: 1488.0) & (original description: Putative At5g41260, Description = Probable serine/threonine-protein kinase At5g41260, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben044scf00025105ctg010_836-9670' '(at3g23340 : 619.0) casein kinase I-like 10 (ckl10); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase I (TAIR:AT4G14340.1); Has 56550 Blast hits to 56234 proteins in 2232 species: Archae - 39; Bacteria - 9117; Metazoa - 21673; Fungi - 6267; Plants - 8804; Viruses - 331; Other Eukaryotes - 10319 (source: NCBI BLink). & (gnl|cdd|36378 : 481.0) no description available & (gnl|cdd|29142 : 162.0) no description available & (reliability: 1238.0) & (original description: Putative ckl5, Description = Casein kinase I-like protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00025185ctg011_13128-15997' '(at5g66710 : 149.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase, ATN1-like (InterPro:IPR015784), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G50720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35413 : 103.0) no description available & (gnl|cdd|47549 : 100.0) no description available & (reliability: 298.0) & (original description: Putative ATN1, Description = Serine/threonine-protein kinase HT1, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben044scf00026205ctg005_11-4613' '(at3g59410 : 207.0) GCN2; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, translation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Anticodon-binding (InterPro:IPR004154), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), RWD (InterPro:IPR006575); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT3G02760.1). & (reliability: 414.0) & (original description: Putative GCN2, Description = Putative serine/threonine-protein kinase GCN2, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben044scf00027047ctg012_1-5815' '(at3g15610 : 542.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G52730.1); Has 43706 Blast hits to 23089 proteins in 800 species: Archae - 76; Bacteria - 7357; Metazoa - 15603; Fungi - 10314; Plants - 4879; Viruses - 0; Other Eukaryotes - 5477 (source: NCBI BLink). & (gnl|cdd|35499 : 502.0) no description available & (gnl|cdd|29257 : 156.0) no description available & (reliability: 1084.0) & (original description: Putative strap, Description = Serine-threonine kinase receptor-associated protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '29.4' 'protein.postranslational modification' 'niben044scf00027230ctg002_332-4213' '(q75lr7|sapk1_orysa : 270.0) Serine/threonine-protein kinase SAPK1 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 1) - Oryza sativa (Rice) & (at4g33950 : 244.0) Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network.; OPEN STOMATA 1 (OST1); FUNCTIONS IN: calcium-dependent protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 (TAIR:AT5G66880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35803 : 152.0) no description available & (gnl|cdd|47550 : 122.0) no description available & (reliability: 482.0) & (original description: Putative pco069505(751), Description = Putative snRK/SAPK family protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00027811ctg001_2287-8896' '(at1g09020 : 283.0) putative activator subunit of SNF1-related protein kinase; homolog of yeast sucrose nonfermenting 4 (SNF4); CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase-related (TAIR:AT1G27070.1); Has 1379 Blast hits to 1368 proteins in 272 species: Archae - 14; Bacteria - 104; Metazoa - 613; Fungi - 295; Plants - 229; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|30346 : 100.0) no description available & (reliability: 566.0) & (original description: Putative , Description = AMP-activated protein kinase, gamma regulatory subunit, putative, PFAM = PF16561)' T '29.4' 'protein.postranslational modification' 'niben044scf00028105ctg009_1-4808' '(at5g51290 : 190.0) Diacylglycerol kinase family protein; FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206); BEST Arabidopsis thaliana protein match is: long-chain base (LCB) kinase 1 (TAIR:AT5G23450.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36331 : 138.0) no description available & (reliability: 380.0) & (original description: Putative ACD5, Description = Ceramide kinase, PFAM = PF00781)' T '29.4' 'protein.postranslational modification' 'niben044scf00028161ctg009_6734-17066' '(at3g22790 : 917.0) Kinase interacting (KIP1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: kinase interacting (KIP1-like) family protein (TAIR:AT4G14760.1); Has 216725 Blast hits to 82224 proteins in 3436 species: Archae - 3482; Bacteria - 43267; Metazoa - 93913; Fungi - 17447; Plants - 11833; Viruses - 1017; Other Eukaryotes - 45766 (source: NCBI BLink). & (gnl|cdd|71206 : 133.0) no description available & (gnl|cdd|35383 : 113.0) no description available & (reliability: 1834.0) & (original description: Putative NET1C, Description = Kinase interacting family protein, putative, PFAM = PF07765)' T '29.4' 'protein.postranslational modification' 'niben044scf00028256ctg002_6603-10896' '(at1g53670 : 234.0) methionine sulfoxide reductase B 1 (MSRB1); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B3 (TAIR:AT4G04800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80581 : 208.0) no description available & (gnl|cdd|36074 : 182.0) no description available & (reliability: 468.0) & (original description: Putative msrB, Description = Peptide methionine sulfoxide reductase MsrB, PFAM = PF01641)' T '29.4' 'protein.postranslational modification' 'niben044scf00029016ctg001_1-6175' '(q7xqp4|sapk7_orysa : 576.0) Serine/threonine-protein kinase SAPK7 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 7) - Oryza sativa (Rice) & (at5g63650 : 573.0) encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress.; SNF1-related protein kinase 2.5 (SNRK2.5); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: SNF1-related protein kinase 2.1 (TAIR:AT5G08590.1); Has 132292 Blast hits to 116481 proteins in 3406 species: Archae - 169; Bacteria - 13418; Metazoa - 52934; Fungi - 13701; Plants - 25794; Viruses - 1077; Other Eukaryotes - 25199 (source: NCBI BLink). & (gnl|cdd|35803 : 310.0) no description available & (gnl|cdd|29142 : 271.0) no description available & (reliability: 1146.0) & (original description: Putative SAPK7, Description = Serine/threonine-protein kinase SAPK7, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00029253ctg001_4138-9702' '(at5g51800 : 811.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G33550.1); Has 821 Blast hits to 813 proteins in 138 species: Archae - 2; Bacteria - 24; Metazoa - 127; Fungi - 81; Plants - 483; Viruses - 14; Other Eukaryotes - 90 (source: NCBI BLink). & (reliability: 1622.0) & (original description: Putative At5g51800, Description = Gb}, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben044scf00029317ctg002_610-4748' '(at3g63340 : 278.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein serine/threonine phosphatase activity, protein kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein phosphatase 2C-related (InterPro:IPR001932), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), Protein phosphatase 2C (InterPro:IPR015655); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G63320.1). & (gnl|cdd|35917 : 179.0) no description available & (gnl|cdd|29062 : 173.0) no description available & (reliability: 556.0) & (original description: Putative At3g63320, Description = Putative ovule protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben044scf00029619ctg000_5381-14114' '(q1sgf1|parp3_medtr : 850.0) Putative poly [ADP-ribose] polymerase 3 (EC 2.4.2.30) (PARP-3) (ADPRT 3) (NAD(+) ADP-ribosyltransferase 3) (Poly[ADP-ribose] synthetase 3) - Medicago truncatula (Barrel medic) & (at5g22470 : 803.0) NAD+ ADP-ribosyltransferases;NAD+ ADP-ribosyltransferases; FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity; INVOLVED IN: protein amino acid ADP-ribosylation; LOCATED IN: intracellular, nucleus; CONTAINS InterPro DOMAIN/s: WGR (InterPro:IPR008893), Poly(ADP-ribose) polymerase, regulatory domain (InterPro:IPR004102), PADR1 (InterPro:IPR012982), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: poly(ADP-ribose) polymerase 2 (TAIR:AT2G31320.1); Has 672 Blast hits to 662 proteins in 152 species: Archae - 0; Bacteria - 20; Metazoa - 347; Fungi - 74; Plants - 111; Viruses - 2; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|30068 : 291.0) no description available & (gnl|cdd|36255 : 218.0) no description available & (reliability: 1606.0) & (original description: Putative PM38, Description = PARP, PFAM = PF00644;PF02877;PF05406)' T '29.4' 'protein.postranslational modification' 'niben044scf00030233ctg003_27945-33982' '(at2g32850 : 634.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: serine/threonine protein kinase 3 (TAIR:AT5G08160.1); Has 91647 Blast hits to 90290 proteins in 2701 species: Archae - 81; Bacteria - 10784; Metazoa - 33910; Fungi - 10357; Plants - 19846; Viruses - 210; Other Eukaryotes - 16459 (source: NCBI BLink). & (gnl|cdd|37200 : 372.0) no description available & (gnl|cdd|29142 : 176.0) no description available & (reliability: 1268.0) & (original description: Putative aak1, Description = AP2-associated protein kinase 1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00030282ctg026_37732-42012' '(p48490|pp1_phavu : 246.0) Serine/threonine-protein phosphatase PP1 (EC 3.1.3.16) - Phaseolus vulgaris (Kidney bean) (French bean) & (at5g27840 : 238.0) encodes a serine/threonine protein phosphatase expressed in expressed in roots, rosettes and flowers.; TOPP8; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT3G05580.1); Has 7274 Blast hits to 7088 proteins in 679 species: Archae - 78; Bacteria - 658; Metazoa - 2391; Fungi - 1410; Plants - 989; Viruses - 10; Other Eukaryotes - 1738 (source: NCBI BLink). & (gnl|cdd|35595 : 225.0) no description available & (gnl|cdd|47495 : 195.0) no description available & (reliability: 476.0) & (original description: Putative bimG, Description = Serine/threonine-protein phosphatase, PFAM = PF16891;PF00149)' T '29.4' 'protein.postranslational modification' 'niben044scf00030850ctg002_7816-13754' '(at4g27290 : 503.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor kinase 3 (TAIR:AT4G21380.1); Has 125077 Blast hits to 123040 proteins in 4681 species: Archae - 101; Bacteria - 14188; Metazoa - 45583; Fungi - 10059; Plants - 36201; Viruses - 449; Other Eukaryotes - 18496 (source: NCBI BLink). & (gnl|cdd|36401 : 319.0) no description available & (q8lkz1|nork_pea : 209.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|29142 : 177.0) no description available & (reliability: 924.0) & (original description: Putative PGSC0003DMG400044943, Description = Serine/threonine-protein kinase, PFAM = PF00954;PF08276;PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00031635ctg002_19049-25287' '(at5g50180 : 594.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase, ATN1-like (InterPro:IPR015784), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G40540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35413 : 309.0) no description available & (gnl|cdd|47549 : 213.0) no description available & (p29619|cdc22_orysa : 99.0) Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Oryza sativa (Rice) & (reliability: 1188.0) & (original description: Putative ATN1, Description = AT3g27560/MMJ24_11, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben044scf00032216ctg010_5136-9574' '(at1g11330 : 384.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-1 13 (TAIR:AT1G11350.1). & (gnl|cdd|36401 : 302.0) no description available & (q8lkz1|nork_pea : 192.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 166.0) no description available & (reliability: 768.0) & (original description: Putative SRK, Description = Serine/threonine-protein kinase, PFAM = PF00069;PF11883)' T '29.4' 'protein.postranslational modification' 'niben044scf00032476ctg002_910-13043' '(at3g03940 : 1155.0) Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT5G18190.1); Has 16177 Blast hits to 16113 proteins in 1419 species: Archae - 20; Bacteria - 5310; Metazoa - 4811; Fungi - 1519; Plants - 1815; Viruses - 223; Other Eukaryotes - 2479 (source: NCBI BLink). & (gnl|cdd|36379 : 243.0) no description available & (gnl|cdd|29142 : 108.0) no description available & (reliability: 2310.0) & (original description: Putative CKI, Description = Casein kinase I, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00032476ctg002_931-7633' '(at3g03940 : 749.0) Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT5G18190.1); Has 16177 Blast hits to 16113 proteins in 1419 species: Archae - 20; Bacteria - 5310; Metazoa - 4811; Fungi - 1519; Plants - 1815; Viruses - 223; Other Eukaryotes - 2479 (source: NCBI BLink). & (gnl|cdd|36379 : 243.0) no description available & (gnl|cdd|29142 : 108.0) no description available & (reliability: 1498.0) & (original description: Putative CKI, Description = Casein kinase I-2-like protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00032560ctg005_6132-10064' '(at2g34650 : 496.0) Encodes a protein serine/threonine kinase that may act as a positive regulator of cellular auxin efflux, as a a binary switch for PIN polarity, and as a negative regulator of auxin signaling. Recessive mutants exhibit similar phenotypes as pin-formed mutants in flowers and inflorescence but distinct phenotypes in cotyledons and leaves. Expressed in the vascular tissue proximal to root and shoot meristems, shoot apex, and embryos. Expression is induced by auxin. Overexpression of the gene results in phenotypes in the root and shoot similar to those found in auxin-insensitive mutants. The protein physically interacts with TCH3 (TOUCH3) and PID-BINDING PROTEIN 1 (PBP1), a previously uncharacterized protein containing putative EF-hand calcium-binding motifs. Acts together with ENP (ENHANCER OF PINOID) to instruct precursor cells to elaborate cotyledons in the transition stage embryo. Interacts with PDK1. PID autophosphorylation is required for the ability of PID to phosphorylate an exogenous substrate. PID activation loop is required for PDK1-dependent PID phosphorylation and requires the PIF domain. Negative regulator of root hair growth. PID kinase activity is critical for the inhibition of root hair growth and for maintaining the proper subcellular localization of PID.; PINOID (PID); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: D6 protein kinase (TAIR:AT5G55910.1); Has 93882 Blast hits to 91860 proteins in 2892 species: Archae - 58; Bacteria - 12658; Metazoa - 35611; Fungi - 11097; Plants - 17324; Viruses - 331; Other Eukaryotes - 16803 (source: NCBI BLink). & (gnl|cdd|35830 : 471.0) no description available & (p15792|kpk1_phavu : 335.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|47550 : 246.0) no description available & (reliability: 992.0) & (original description: Putative bif2, Description = Protein kinase G11A, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00032991ctg008_1980-7225' '(at1g77720 : 238.0) Encodes a predicted protein kinase based on sequence similarity.; putative protein kinase 1 (PPK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: MAPK/ERK kinase kinase 3 (TAIR:AT4G08470.1); Has 102737 Blast hits to 99628 proteins in 3502 species: Archae - 97; Bacteria - 12996; Metazoa - 35733; Fungi - 11774; Plants - 22485; Viruses - 236; Other Eukaryotes - 19416 (source: NCBI BLink). & (gnl|cdd|35816 : 134.0) no description available & (reliability: 476.0) & (original description: Putative PPK1, Description = Serine/threonine-protein kinase mph1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00033168ctg001_12132-19384' '(at4g16970 : 568.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G19110.1); Has 37123 Blast hits to 30477 proteins in 1124 species: Archae - 42; Bacteria - 1923; Metazoa - 14429; Fungi - 5359; Plants - 8078; Viruses - 40; Other Eukaryotes - 7252 (source: NCBI BLink). & (gnl|cdd|36382 : 147.0) no description available & (gnl|cdd|47550 : 103.0) no description available & (reliability: 1136.0) & (original description: Putative dl4515c, Description = Kinase like protein, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00033318ctg000_663-4651' '(at2g42810 : 220.0) Encodes a phytochrome-specific type 5 serine/threonine protein phosphatase. It dephosphorylates active Pfr-phytochromes. Controls light signal flux by enhancing phytochrome stability and affinity for a signal transducer. The gene is alternately spliced. This variant is an integral membrane protein localized to the ER and nuclear envelope.; protein phosphatase 5.2 (PP5.2); FUNCTIONS IN: protein binding, phosphoprotein phosphatase activity, protein serine/threonine phosphatase activity; INVOLVED IN: response to cadmium ion, nucleocytoplasmic transport, red or far-red light signaling pathway; LOCATED IN: nuclear envelope, integral to endoplasmic reticulum membrane, nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Metallophosphoesterase (InterPro:IPR004843), Protein phosphatase 5 (InterPro:IPR011236), Tetratricopeptide-like helical (InterPro:IPR011990), Serine/threonine phosphatase, PPP5 (InterPro:IPR013235), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT5G27840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35597 : 141.0) no description available & (gnl|cdd|71753 : 125.0) no description available & (reliability: 440.0) & (original description: Putative PP5, Description = Serine/threonine-protein phosphatase 5, PFAM = PF08321)' T '29.4' 'protein.postranslational modification' 'niben044scf00033335ctg002_1813-7947' '(at5g51760 : 261.0) Encodes AHG1 (ABA-hypersensitive germination 1), a putative protein phosphatase 2C (PP2C). Expressed in seeds. AHG1 functions in seed development and germination.; ABA-hypersensitive germination 1 (AHG1); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: seed germination, response to abscisic acid stimulus, seed development; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: seed; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 3 (TAIR:AT2G29380.1); Has 6503 Blast hits to 6478 proteins in 370 species: Archae - 6; Bacteria - 133; Metazoa - 1626; Fungi - 786; Plants - 2672; Viruses - 7; Other Eukaryotes - 1273 (source: NCBI BLink). & (gnl|cdd|29062 : 221.0) no description available & (gnl|cdd|35917 : 219.0) no description available & (reliability: 522.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481;PF00481)' T '29.4' 'protein.postranslational modification' 'niben044scf00033418ctg000_18346-25210' '(at3g51370 : 613.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), Protein phosphatase 2C (InterPro:IPR015655); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35919 : 405.0) no description available & (gnl|cdd|29062 : 171.0) no description available & (reliability: 1226.0) & (original description: Putative pp2C2, Description = Serine/threonine phosphatase family, 2C domain protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben044scf00033758ctg006_1051-5008' '(at1g04130 : 329.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G56440.1); Has 5277 Blast hits to 4657 proteins in 398 species: Archae - 14; Bacteria - 308; Metazoa - 2191; Fungi - 837; Plants - 950; Viruses - 0; Other Eukaryotes - 977 (source: NCBI BLink). & (gnl|cdd|35771 : 138.0) no description available & (reliability: 658.0) & (original description: Putative RCOM_0615940, Description = Heat shock protein 70 (HSP70)-interacting protein, putative, PFAM = PF13181)' T '29.4' 'protein.postranslational modification' 'niben044scf00034253ctg001_5189-9171' '(at3g62010 : 279.0) unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages. & (reliability: 558.0) & (original description: Putative At3g62010, Description = Os03g0586700 protein, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben044scf00034261ctg003_1-1672' '(at5g55560 : 179.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 3 (TAIR:AT3G48260.1); Has 100897 Blast hits to 100061 proteins in 3189 species: Archae - 71; Bacteria - 9572; Metazoa - 37309; Fungi - 9559; Plants - 27616; Viruses - 356; Other Eukaryotes - 16414 (source: NCBI BLink). & (gnl|cdd|35804 : 174.0) no description available & (gnl|cdd|29142 : 85.6) no description available & (reliability: 358.0) & (original description: Putative oipk, Description = WNK kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00034600ctg008_1823-6752' '(at2g27210 : 444.0) BRI1 suppressor 1 (BSU1)-like 3 (BSL3); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, iron ion binding, phosphoprotein phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Metallophosphoesterase (InterPro:IPR004843), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 2 (TAIR:AT1G08420.2). & (q2qm47|bsl2_orysa : 417.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (reliability: 884.0) & (original description: Putative BSL1, Description = Serine/threonine-protein phosphatase, PFAM = PF07646)' T '29.4' 'protein.postranslational modification' 'niben044scf00034600ctg009_1-4877' '(at2g27210 : 721.0) BRI1 suppressor 1 (BSU1)-like 3 (BSL3); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, iron ion binding, phosphoprotein phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Metallophosphoesterase (InterPro:IPR004843), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 2 (TAIR:AT1G08420.2). & (q2qm47|bsl2_orysa : 715.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35595 : 348.0) no description available & (gnl|cdd|29063 : 295.0) no description available & (reliability: 1416.0) & (original description: Putative bimG, Description = Serine/threonine-protein phosphatase, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'niben044scf00034642ctg000_1-5536' '(at5g59010 : 821.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT3G54030.1); Has 21140 Blast hits to 20932 proteins in 637 species: Archae - 6; Bacteria - 562; Metazoa - 1681; Fungi - 205; Plants - 18085; Viruses - 31; Other Eukaryotes - 570 (source: NCBI BLink). & (gnl|cdd|36401 : 202.0) no description available & (o24585|cri4_maize : 114.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 108.0) no description available & (reliability: 1562.0) & (original description: Putative At5g41260, Description = Probable serine/threonine-protein kinase At5g41260, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben044scf00035332ctg002_3845-8043' '(at5g58950 : 621.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G46930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 294.0) no description available & (gnl|cdd|47549 : 250.0) no description available & (q02723|rkin1_secce : 95.1) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (reliability: 1242.0) & (original description: Putative pk1, Description = Protein kinase (PK), PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben044scf00035535ctg002_4608-9598' '(at5g04510 : 517.0) Encodes 3-phosphoinositide-dependent protein kinase that contains pleckstrin homology domain and binds 3-phosphoinositides. It activates the protein kinase AGC2-1 in a phosphatidic acid dependent manner. Phosphorylates S6K1. Interacts with PID, and transphosphorylation by PDK1 increases PID autophosphorylation.; 3'-phosphoinositide-dependent protein kinase 1 (PDK1); FUNCTIONS IN: 3-phosphoinositide-dependent protein kinase activity, protein binding, phosphoinositide binding, protein kinase activity, kinase activity; INVOLVED IN: positive regulation of protein kinase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase-1, 3-phosphoinositide dependent (InterPro:IPR015746), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: 3-phosphoinositide-dependent protein kinase (TAIR:AT3G10540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35812 : 374.0) no description available & (gnl|cdd|29142 : 253.0) no description available & (q6x4a2|cipk1_orysa : 153.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1034.0) & (original description: Putative pdkA, Description = AGC/PDK1 protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00035729ctg008_1933-7031' '(at2g44830 : 811.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 2 (TAIR:AT5G47750.1); Has 114332 Blast hits to 86906 proteins in 3497 species: Archae - 36; Bacteria - 13769; Metazoa - 45842; Fungi - 12821; Plants - 20261; Viruses - 350; Other Eukaryotes - 21253 (source: NCBI BLink). & (gnl|cdd|35830 : 660.0) no description available & (p47997|g11a_orysa : 599.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 166.0) no description available & (reliability: 1622.0) & (original description: Putative Adi3, Description = AvrPto-dependent Pto-interacting protein 3, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00035775ctg000_25024-31661' '(at5g51760 : 315.0) Encodes AHG1 (ABA-hypersensitive germination 1), a putative protein phosphatase 2C (PP2C). Expressed in seeds. AHG1 functions in seed development and germination.; ABA-hypersensitive germination 1 (AHG1); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: seed germination, response to abscisic acid stimulus, seed development; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: seed; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 3 (TAIR:AT2G29380.1); Has 6503 Blast hits to 6478 proteins in 370 species: Archae - 6; Bacteria - 133; Metazoa - 1626; Fungi - 786; Plants - 2672; Viruses - 7; Other Eukaryotes - 1273 (source: NCBI BLink). & (gnl|cdd|29062 : 226.0) no description available & (gnl|cdd|35917 : 214.0) no description available & (reliability: 630.0) & (original description: Putative AHG1, Description = Probable protein phosphatase 2C 75, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben044scf00036050ctg002_11224-12764' '(p17840|slsg3_braol : 101.0) S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage) & (at4g21380 : 97.1) encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels.; receptor kinase 3 (RK3); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), S-locus, receptor kinase (InterPro:IPR022126); BEST Arabidopsis thaliana protein match is: receptor kinase 2 (TAIR:AT1G65800.1); Has 120297 Blast hits to 118488 proteins in 4631 species: Archae - 97; Bacteria - 13304; Metazoa - 44101; Fungi - 10092; Plants - 34714; Viruses - 410; Other Eukaryotes - 17579 (source: NCBI BLink). & (gnl|cdd|47452 : 80.0) no description available & (reliability: 189.4) & (original description: Putative PGSC0003DMG402013876, Description = Serine/threonine-protein kinase, PFAM = PF01453)' T '29.4' 'protein.postranslational modification' 'niben044scf00036050ctg005_206-5564' '(at1g11340 : 838.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), EGF-like, type 3 (InterPro:IPR000742), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G11410.1); Has 123060 Blast hits to 121063 proteins in 4656 species: Archae - 122; Bacteria - 13729; Metazoa - 45275; Fungi - 10148; Plants - 35343; Viruses - 433; Other Eukaryotes - 18010 (source: NCBI BLink). & (gnl|cdd|36401 : 336.0) no description available & (p17840|slsg3_braol : 323.0) S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage) & (gnl|cdd|47549 : 182.0) no description available & (reliability: 1676.0) & (original description: Putative RKS1, Description = G-type lectin S-receptor-like serine/threonine-protein kinase RKS1, PFAM = PF00954;PF01453;PF08276;PF07714)' T '29.4' 'protein.postranslational modification' 'niben044scf00036362ctg011_1-6800' '(at4g26100 : 580.0) Encodes a member of the casein kinase 1 protein family that is expressed in punctate particles at the cell periphery suggesting possible plasmodesmatal localization.; casein kinase 1 (CK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasmodesma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase I-like 12 (TAIR:AT5G57015.1); Has 62578 Blast hits to 62222 proteins in 2324 species: Archae - 33; Bacteria - 9966; Metazoa - 23829; Fungi - 6469; Plants - 10923; Viruses - 370; Other Eukaryotes - 10988 (source: NCBI BLink). & (gnl|cdd|36378 : 448.0) no description available & (gnl|cdd|29142 : 143.0) no description available & (reliability: 1160.0) & (original description: Putative ckl5, Description = Casein kinase I isoform delta-like protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00036368ctg000_8709-14978' '(at1g31160 : 159.0) Encodes a member of the histidine triad nucleotide-binding family of proteins, but its activity has not been determined.; HISTIDINE TRIAD NUCLEOTIDE-BINDING 2 (HINT 2); FUNCTIONS IN: protein kinase C binding, zinc ion binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808), Histidine triad (HIT) protein (InterPro:IPR001310), Histidine triad motif (InterPro:IPR011151); BEST Arabidopsis thaliana protein match is: HIS triad family protein 3 (TAIR:AT3G56490.1); Has 8225 Blast hits to 8223 proteins in 2654 species: Archae - 159; Bacteria - 5014; Metazoa - 405; Fungi - 167; Plants - 130; Viruses - 0; Other Eukaryotes - 2350 (source: NCBI BLink). & (p42856|zb14_maize : 147.0) 14 kDa zinc-binding protein (Protein kinase C inhibitor) (PKCI) - Zea mays (Maize) & (gnl|cdd|38485 : 129.0) no description available & (gnl|cdd|29589 : 119.0) no description available & (reliability: 318.0) & (original description: Putative hit, Description = Histidine triad (HIT) protein, PFAM = PF01230)' T '29.4' 'protein.postranslational modification' 'niben044scf00036493ctg005_1-8797' '(at3g44850 : 722.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G22840.1); Has 38681 Blast hits to 29843 proteins in 1092 species: Archae - 4; Bacteria - 1517; Metazoa - 15700; Fungi - 7143; Plants - 6601; Viruses - 16; Other Eukaryotes - 7700 (source: NCBI BLink). & (gnl|cdd|36504 : 689.0) no description available & (gnl|cdd|47550 : 107.0) no description available & (reliability: 1444.0) & (original description: Putative dsk1, Description = Protein kinase dsk1, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00036517ctg002_16907-25570' '(at3g46920 : 556.0) Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT1G79570.1); Has 114688 Blast hits to 113328 proteins in 4810 species: Archae - 114; Bacteria - 11620; Metazoa - 44899; Fungi - 9603; Plants - 31346; Viruses - 418; Other Eukaryotes - 16688 (source: NCBI BLink). & (gnl|cdd|35413 : 316.0) no description available & (gnl|cdd|87344 : 240.0) no description available & (q8lkz1|nork_pea : 95.5) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 1112.0) & (original description: Putative STY2, Description = Serine/threonine-protein kinase CTR1, PFAM = PF00564;PF07714)' T '29.4' 'protein.postranslational modification' 'niben044scf00037135ctg005_3250-16907' '(at5g58140 : 1194.0) Membrane-bound protein serine/threonine kinase that functions as blue light photoreceptor in redundancy with PHO1. Involved in stomatal opening, chloroplast movement and phototropism. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT2 possesses two LOV (LOV1 and LOV2, for light-oxygen-voltage-sensing) domains involved in FMN-binding and a C-terminus forming a serine/threonine kinase domain. LOV2 acts as an inhibitor of phototropin kinase in the dark, and light cancels the inhibition through cysteine-FMN adduct formation. LOV1 in contrast acts as an attenuator of photoactivation. Localized to the Golgi apparatus under the induction of blue light.; phototropin 2 (PHOT2); FUNCTIONS IN: protein serine/threonine kinase activity, FMN binding, kinase activity, blue light photoreceptor activity; INVOLVED IN: in 7 processes; LOCATED IN: Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: phototropin 1 (TAIR:AT3G45780.2); Has 25181 Blast hits to 21357 proteins in 1460 species: Archae - 236; Bacteria - 6754; Metazoa - 8411; Fungi - 2718; Plants - 3113; Viruses - 9; Other Eukaryotes - 3940 (source: NCBI BLink). & (gnl|cdd|35830 : 450.0) no description available & (gnl|cdd|29142 : 257.0) no description available & (p15792|kpk1_phavu : 215.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 2388.0) & (original description: Putative PHOT2, Description = Phototropin-2, PFAM = PF13426;PF13426;PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00038103ctg008_4087-8775' '(at5g57050 : 393.0) Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo.; ABA INSENSITIVE 2 (ABI2); CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G26080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35917 : 244.0) no description available & (gnl|cdd|47660 : 230.0) no description available & (reliability: 786.0) & (original description: Putative ABI2, Description = Protein phosphatase 2C 77, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben044scf00039152ctg005_10064-17460' '(at1g73660 : 632.0) Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance.; protein tyrosine kinase family protein; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Ubiquitin interacting motif (InterPro:IPR003903), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18160.1); Has 126827 Blast hits to 124278 proteins in 4857 species: Archae - 98; Bacteria - 13376; Metazoa - 48156; Fungi - 11388; Plants - 33654; Viruses - 503; Other Eukaryotes - 19652 (source: NCBI BLink). & (reliability: 1264.0) & (original description: Putative Os06g0232100, Description = Os06g0232100 protein, PFAM = PF14381)' T '29.4' 'protein.postranslational modification' 'niben044scf00040399ctg001_1-7338' '(at5g63870 : 598.0) Encodes a nuclear localized serine/threonine phosphatase that appears to be regulated by redox activity and is a positive regulator of cryptochrome mediated blue light signalling.; serine/threonine phosphatase 7 (PP7); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: hydrolases;protein serine/threonine phosphatases (TAIR:AT1G48120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35597 : 281.0) no description available & (gnl|cdd|29063 : 228.0) no description available & (o04860|pp2a5_tobac : 139.0) Serine/threonine-protein phosphatase PP2A-5 catalytic subunit (EC 3.1.3.16) - Nicotiana tabacum (Common tobacco) & (reliability: 1196.0) & (original description: Putative PP7, Description = Serine/threonine-protein phosphatase 7, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'niben044scf00040676ctg001_1-5929' '(q75v63|sapk3_orysa : 514.0) Serine/threonine-protein kinase SAPK3 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 3) (Protein kinase REK) - Oryza sativa (Rice) & (at4g33950 : 486.0) Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network.; OPEN STOMATA 1 (OST1); FUNCTIONS IN: calcium-dependent protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 (TAIR:AT5G66880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35803 : 302.0) no description available & (gnl|cdd|47550 : 268.0) no description available & (reliability: 970.0) & (original description: Putative SAPK3, Description = Serine/threonine-protein kinase SAPK3, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00040993ctg006_73-3404' '(at5g01820 : 495.0) Encodes a CBL-interacting serine/threonine protein kinase.; serine/threonine protein kinase 1 (SR1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SOS3-interacting protein 4 (TAIR:AT2G30360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35803 : 338.0) no description available & (q6x4a2|cipk1_orysa : 335.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|29142 : 291.0) no description available & (reliability: 990.0) & (original description: Putative CIPK14, Description = CBL-interacting serine/threonine-protein kinase 14, PFAM = PF00069;PF03822)' T '29.4' 'protein.postranslational modification' 'niben044scf00041488ctg000_1-7008' '(at3g62010 : 431.0) unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages. & (reliability: 862.0) & (original description: Putative At3g62010, Description = Predicted protein, PFAM = PF14566)' T '29.4' 'protein.postranslational modification' 'niben044scf00041488ctg003_3905-15029' '(at3g62010 : 1384.0) unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages. & (reliability: 2768.0) & (original description: Putative At3g62010, Description = Predicted protein, PFAM = PF14566;PF14566)' T '29.4' 'protein.postranslational modification' 'niben044scf00041702ctg003_2779-15030' '(at4g14350 : 850.0) AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm, phragmoplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), Protein kinase-like domain (InterPro:IPR011009), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT3G23310.1); Has 110439 Blast hits to 109096 proteins in 3570 species: Archae - 132; Bacteria - 13667; Metazoa - 39169; Fungi - 11337; Plants - 26451; Viruses - 447; Other Eukaryotes - 19236 (source: NCBI BLink). & (gnl|cdd|35825 : 712.0) no description available & (gnl|cdd|47550 : 282.0) no description available & (p15792|kpk1_phavu : 160.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1700.0) & (original description: Putative ndrA, Description = Putative uncharacterized protein ndrA, PFAM = PF00069;PF00433)' T '29.4' 'protein.postranslational modification' 'niben044scf00042109ctg007_1970-8545' '(at4g33500 : 228.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, phosphoprotein phosphatase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Sporulation stage II, protein E C-terminal (InterPro:IPR010822); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G16580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36593 : 200.0) no description available & (reliability: 456.0) & (original description: Putative gpm564, Description = Protein phosphatase 2C (PP2C)-like protein, PFAM = PF07228)' T '29.4' 'protein.postranslational modification' 'niben044scf00042221ctg001_4049-14348' '(at1g79640 : 700.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G14720.1). & (gnl|cdd|35802 : 471.0) no description available & (gnl|cdd|47550 : 252.0) no description available & (q5qn75|m2k1_orysa : 135.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1400.0) & (original description: Putative MAP4K4, Description = MAP kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00043523ctg003_1-2664' '(at5g08160 : 204.0) Encodes a serine/threonine protein kinase.; serine/threonine protein kinase 3 (PK3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G32850.2); Has 37972 Blast hits to 37793 proteins in 1677 species: Archae - 67; Bacteria - 5765; Metazoa - 14817; Fungi - 4512; Plants - 5796; Viruses - 46; Other Eukaryotes - 6969 (source: NCBI BLink). & (gnl|cdd|37556 : 101.0) no description available & (reliability: 408.0) & (original description: Putative PK1, Description = Serine/threonine-protein kinase 16, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben044scf00045354ctg001_394-2271' '(at1g45160 : 151.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G17850.1); Has 126537 Blast hits to 124799 proteins in 4593 species: Archae - 166; Bacteria - 15103; Metazoa - 47179; Fungi - 12961; Plants - 29525; Viruses - 530; Other Eukaryotes - 21073 (source: NCBI BLink). & (gnl|cdd|35826 : 99.8) no description available & (reliability: 302.0) & (original description: Putative IRE, Description = Serine/threonine protein kinase 15, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben044scf00045354ctg002_1-5342' '(at1g45160 : 489.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G17850.1); Has 126537 Blast hits to 124799 proteins in 4593 species: Archae - 166; Bacteria - 15103; Metazoa - 47179; Fungi - 12961; Plants - 29525; Viruses - 530; Other Eukaryotes - 21073 (source: NCBI BLink). & (gnl|cdd|35826 : 358.0) no description available & (gnl|cdd|29142 : 247.0) no description available & (p15792|kpk1_phavu : 166.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 978.0) & (original description: Putative stpk15, Description = Serine/threonine protein kinase 15, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00045703ctg001_6076-13825' '(q6au07|dbr1_orysa : 196.0) Lariat debranching enzyme (EC 3.1.-.-) - Oryza sativa (Rice) & (at4g31770 : 191.0) Encodes a RNA lariat debranching enzyme required for embryogenesis.; debranching enzyme 1 (DBR1); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Lariat debranching enzyme, C-terminal (InterPro:IPR007708); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38074 : 145.0) no description available & (reliability: 382.0) & (original description: Putative dbr1, Description = Lariat debranching enzyme, PFAM = PF05011)' T '29.4' 'protein.postranslational modification' 'niben044scf00045793ctg003_1-5247' '(at3g44200 : 171.0) Encodes AtNek5, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.Interacts physically with plant kinesins ARK1 and ARK2. Mutants show defects in root epidermal cell morphology, trichome branching and other epidermal cell abnormalities suggesting a rol e in epidermal cell differentiation. NEK6 co-localizes with cortical microtubules.; "NIMA (never in mitosis, gene A)-related 6" (NEK6); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: microtubule-based process, epidermal cell differentiation; LOCATED IN: cortical microtubule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NIMA-related serine/threonine kinase 1 (TAIR:AT1G54510.3); Has 127749 Blast hits to 124714 proteins in 4408 species: Archae - 106; Bacteria - 14910; Metazoa - 47444; Fungi - 12949; Plants - 30417; Viruses - 519; Other Eukaryotes - 21404 (source: NCBI BLink). & (gnl|cdd|35809 : 144.0) no description available & (gnl|cdd|47550 : 87.6) no description available & (reliability: 342.0) & (original description: Putative stkc, Description = Serine/threonine-protein kinase Nek5, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00048796ctg001_1550-5414' '(at4g32300 : 423.0) S-domain-2 5 (SD2-5); FUNCTIONS IN: carbohydrate binding, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid autophosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT5G35370.1); Has 119450 Blast hits to 117822 proteins in 4317 species: Archae - 101; Bacteria - 12813; Metazoa - 43689; Fungi - 10139; Plants - 34770; Viruses - 395; Other Eukaryotes - 17543 (source: NCBI BLink). & (p17801|kpro_maize : 316.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|36401 : 308.0) no description available & (gnl|cdd|84488 : 169.0) no description available & (reliability: 846.0) & (original description: Putative lecRK1, Description = Serine/threonine-protein kinase, PFAM = PF00069;PF01453)' T '29.4' 'protein.postranslational modification' 'niben044scf00048886ctg004_1-4205' '(at5g41730 : 640.0) Protein kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF1221 (InterPro:IPR010632), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT1G64300.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70237 : 274.0) no description available & (gnl|cdd|35413 : 201.0) no description available & (reliability: 1276.0) & (original description: Putative BnaA09g11580D, Description = BnaA09g11580D protein, PFAM = PF06760;PF07714)' T '29.4' 'protein.postranslational modification' 'niben044scf00048898ctg008_1-4094' '(at3g53030 : 499.0) Encodes a protein kinase SRPK4 that specifically targets Arabidopsis Ser/Arg-rich (SR) slicing factors involved in RNA metabolism. In vitro kinase assay showed that SRPK4 phosphorylates the SR protein RSp31.; ser/arg-rich protein kinase 4 (SRPK4); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: response to oxidative stress, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G44850.1); Has 38460 Blast hits to 29477 proteins in 1034 species: Archae - 2; Bacteria - 1392; Metazoa - 15648; Fungi - 7270; Plants - 6510; Viruses - 16; Other Eukaryotes - 7622 (source: NCBI BLink). & (gnl|cdd|36504 : 490.0) no description available & (gnl|cdd|47550 : 106.0) no description available & (reliability: 998.0) & (original description: Putative dsk1, Description = Protein kinase dsk1, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00049083ctg000_1033-5597' '(at1g63500 : 533.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G41260.1); Has 34543 Blast hits to 34010 proteins in 1386 species: Archae - 8; Bacteria - 2627; Metazoa - 7585; Fungi - 183; Plants - 22470; Viruses - 98; Other Eukaryotes - 1572 (source: NCBI BLink). & (gnl|cdd|36401 : 204.0) no description available & (o24585|cri4_maize : 106.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 106.0) no description available & (reliability: 1066.0) & (original description: Putative BnaA03g43510D, Description = BnaA03g43510D protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben044scf00049315ctg001_1-2489' '(gnl|cdd|35830 : 399.0) no description available & (at3g20830 : 397.0) AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: hypocotyl, male gametophyte, root, pedicel, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G51170.1); Has 85073 Blast hits to 71957 proteins in 2517 species: Archae - 46; Bacteria - 10831; Metazoa - 34711; Fungi - 11201; Plants - 11819; Viruses - 155; Other Eukaryotes - 16310 (source: NCBI BLink). & (gnl|cdd|47550 : 140.0) no description available & (p15792|kpk1_phavu : 131.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 794.0) & (original description: Putative UCNL, Description = Serine/threonine-protein kinase UCNL, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00050480ctg001_3728-9839' '(at1g62400 : 390.0) high leaf temperature 1 (HT1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G58950.1); Has 132835 Blast hits to 130849 proteins in 5233 species: Archae - 136; Bacteria - 14325; Metazoa - 51137; Fungi - 12092; Plants - 33829; Viruses - 555; Other Eukaryotes - 20761 (source: NCBI BLink). & (gnl|cdd|35413 : 290.0) no description available & (gnl|cdd|47549 : 225.0) no description available & (q8lpb4|pskr_dauca : 110.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 780.0) & (original description: Putative HT1, Description = Serine/threonine-protein kinase HT1, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben044scf00050541ctg001_1-5158' '(at3g10540 : 729.0) 3-phosphoinositide-dependent protein kinase; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-1, 3-phosphoinositide dependent (InterPro:IPR015746), Protein kinase, catalytic domain (InterPro:IPR000719), Pleckstrin homology-type (InterPro:IPR011993); BEST Arabidopsis thaliana protein match is: 3'-phosphoinositide-dependent protein kinase 1 (TAIR:AT5G04510.1); Has 127579 Blast hits to 125597 proteins in 4638 species: Archae - 184; Bacteria - 15229; Metazoa - 47076; Fungi - 13122; Plants - 29847; Viruses - 648; Other Eukaryotes - 21473 (source: NCBI BLink). & (gnl|cdd|35812 : 498.0) no description available & (gnl|cdd|29142 : 263.0) no description available & (q6x4a2|cipk1_orysa : 145.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1458.0) & (original description: Putative PDPK2, Description = 3-phosphoinositide-dependent protein kinase 2, PFAM = PF14593;PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00052378ctg001_15249-17728' '(gnl|cdd|84552 : 116.0) no description available & (at3g55550 : 88.2) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G53810.1); Has 119390 Blast hits to 117908 proteins in 4651 species: Archae - 98; Bacteria - 13453; Metazoa - 44108; Fungi - 10128; Plants - 34151; Viruses - 398; Other Eukaryotes - 17054 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative , Description = Alpha-amylase inhibitor alpha subunit family protein, PFAM = PF00139)' T '29.4' 'protein.postranslational modification' 'niben044scf00053762ctg000_1-10626' '(at3g06030 : 648.0) NPK1-related protein kinase 3; NPK1-related protein kinase 3 (NP3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: cortical microtubule organization; LOCATED IN: apoplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Mitogen activated protein kinase kinase kinase 3 (InterPro:IPR015748), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NPK1-related protein kinase 1 (TAIR:AT1G09000.1); Has 135037 Blast hits to 132652 proteins in 4867 species: Archae - 156; Bacteria - 15291; Metazoa - 50641; Fungi - 13369; Plants - 33230; Viruses - 554; Other Eukaryotes - 21796 (source: NCBI BLink). & (gnl|cdd|35419 : 313.0) no description available & (gnl|cdd|29142 : 283.0) no description available & (q5qn75|m2k1_orysa : 119.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1296.0) & (original description: Putative NPK1, Description = Mitogen-activated protein kinase kinase kinase NPK1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00054246ctg002_5002-10910' '(at1g60940 : 586.0) encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress.; SNF1-related protein kinase 2.10 (SNRK2.10); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G10940.1); Has 111565 Blast hits to 109717 proteins in 3008 species: Archae - 112; Bacteria - 13169; Metazoa - 40737; Fungi - 12092; Plants - 25831; Viruses - 494; Other Eukaryotes - 19130 (source: NCBI BLink). & (q7xqp4|sapk7_orysa : 573.0) Serine/threonine-protein kinase SAPK7 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 7) - Oryza sativa (Rice) & (gnl|cdd|35803 : 307.0) no description available & (gnl|cdd|29142 : 266.0) no description available & (reliability: 1172.0) & (original description: Putative pk5, Description = Serin/threonine protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00055094ctg002_1-4688' '(at4g38520 : 613.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35919 : 404.0) no description available & (gnl|cdd|47660 : 181.0) no description available & (reliability: 1226.0) & (original description: Putative pp2C2, Description = Serine/threonine phosphatase family, 2C domain protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben044scf00055094ctg003_1-2447' '(gnl|cdd|36401 : 195.0) no description available & (at1g79620 : 134.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G49760.1); Has 173131 Blast hits to 132948 proteins in 4769 species: Archae - 163; Bacteria - 18653; Metazoa - 51943; Fungi - 10632; Plants - 70309; Viruses - 438; Other Eukaryotes - 20993 (source: NCBI BLink). & (q8l4h4|nork_medtr : 117.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 109.0) no description available & (reliability: 248.0) & (original description: Putative At3g26700, Description = Putative leucine-rich repeat receptor-like protein kinase, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben044scf00055319ctg000_3785-8503' '(gnl|cdd|35820 : 580.0) no description available & (at1g53050 : 561.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G09600.1); Has 124596 Blast hits to 123234 proteins in 4130 species: Archae - 92; Bacteria - 13981; Metazoa - 46101; Fungi - 12764; Plants - 31065; Viruses - 453; Other Eukaryotes - 20140 (source: NCBI BLink). & (gnl|cdd|29142 : 243.0) no description available & (p24923|cdc21_medsa : 224.0) Cell division control protein 2 homolog 1 (EC 2.7.11.22) (EC 2.7.11.23) (Fragment) - Medicago sativa (Alfalfa) & (reliability: 1122.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00057089ctg004_5278-11668' '(gnl|cdd|35804 : 555.0) no description available & (at3g18750 : 521.0) Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.; with no lysine (K) kinase 6 (WNK6); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G49160.2). & (gnl|cdd|47550 : 207.0) no description available & (q5qn75|m2k1_orysa : 84.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1042.0) & (original description: Putative WNK4, Description = Probable serine/threonine-protein kinase WNK4, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00058104ctg000_673-6827' '(at4g38520 : 592.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35919 : 421.0) no description available & (gnl|cdd|47660 : 179.0) no description available & (reliability: 1184.0) & (original description: Putative pp2C2, Description = Serine/threonine phosphatase family, 2C domain protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben044scf00058245ctg000_3496-6887' '(at5g50180 : 441.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase, ATN1-like (InterPro:IPR015784), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G40540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35413 : 237.0) no description available & (gnl|cdd|29142 : 165.0) no description available & (p29619|cdc22_orysa : 91.7) Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Oryza sativa (Rice) & (reliability: 882.0) & (original description: Putative ATN1, Description = Serine/threonine-protein kinase HT1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben044scf00058899ctg000_1-5647' '(gnl|cdd|35830 : 598.0) no description available & (at3g52890 : 550.0) KCBP-interacting protein kinase interacts specifically with the tail region of KCBP; KCBP-interacting protein kinase (KIPK); FUNCTIONS IN: protein binding, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G36350.1); Has 124693 Blast hits to 89359 proteins in 3581 species: Archae - 52; Bacteria - 15752; Metazoa - 49633; Fungi - 14477; Plants - 20322; Viruses - 421; Other Eukaryotes - 24036 (source: NCBI BLink). & (p47997|g11a_orysa : 499.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 162.0) no description available & (reliability: 1100.0) & (original description: Putative Sb08g014350, Description = Putative uncharacterized protein Sb08g014350, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101ctg12623_1-1601' '(at5g10530 : 206.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G65600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 120.0) no description available & (gnl|cdd|47549 : 89.1) no description available & (q8l4h4|nork_medtr : 80.1) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 384.0) & (original description: Putative LecRK, Description = Clade XVIII lectin receptor kinase, PFAM = PF00069;PF00139;PF00139)' T '29.4' 'protein.postranslational modification' 'niben101ctg14514_170-2727' '(at1g67580 : 478.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G63370.4); Has 126651 Blast hits to 124962 proteins in 4234 species: Archae - 92; Bacteria - 13816; Metazoa - 47970; Fungi - 13169; Plants - 29930; Viruses - 638; Other Eukaryotes - 21036 (source: NCBI BLink). & (gnl|cdd|35882 : 403.0) no description available & (p29618|cdc21_orysa : 217.0) Cell division control protein 2 homolog 1 (EC 2.7.11.22) - Oryza sativa (Rice) & (gnl|cdd|29142 : 208.0) no description available & (reliability: 956.0) & (original description: Putative cdkh1, Description = Cyclin-dependent kinase 11B, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00046_32427-37114' '(p15792|kpk1_phavu : 724.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|35830 : 655.0) no description available & (at3g27580 : 647.0) a member of a subfamily of Ser/Thr PKs in plants.; ATPK7; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 2 (TAIR:AT5G47750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47550 : 168.0) no description available & (reliability: 1294.0) & (original description: Putative Adi3, Description = Protein kinase G11A, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00046_220841-226025' '(at5g50180 : 577.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase, ATN1-like (InterPro:IPR015784), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G40540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35413 : 289.0) no description available & (gnl|cdd|47549 : 189.0) no description available & (p29619|cdc22_orysa : 87.0) Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Oryza sativa (Rice) & (reliability: 1154.0) & (original description: Putative ATN1, Description = AT3g27560/MMJ24_11, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf00063_395714-403071' '(at1g18670 : 835.0) Encodes a cyclin-dependent kinase-like protein with a ser/thr protein kinase domain and an N-terminal myristoylation sequence. Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do.; IMPAIRED IN BABA-INDUCED STERILITY 1 (IBS1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G74330.2); Has 121773 Blast hits to 120368 proteins in 4310 species: Archae - 86; Bacteria - 13259; Metazoa - 45481; Fungi - 12893; Plants - 29647; Viruses - 443; Other Eukaryotes - 19964 (source: NCBI BLink). & (gnl|cdd|35820 : 616.0) no description available & (gnl|cdd|29142 : 260.0) no description available & (q38772|cdc2a_antma : 221.0) Cell division control protein 2 homolog A (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (reliability: 1670.0) & (original description: Putative IBS1, Description = Cyclin-dependent kinase-like protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00074_98981-104652' '(at5g01920 : 654.0) Chloroplast thylakoid protein kinase STN8 is specific in phosphorylation of N-terminal threonine residues in D1, D2 and CP43 proteins, and Thr-4 in PsbH protein of photosystem II. Phosphorylation of Thr-4 in the wild type required both light and prior phosphorylation at Thr-2.; STN8; FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: photosystem II stabilization; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, core (InterPro:IPR000719), Serine/threonine protein kinase-related (InterPro:IPR017442), Protein kinase-like (InterPro:IPR011009), Serine/threonine protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: STN7 (Stt7 homolog STN7); kinase/ protein kinase (TAIR:AT1G68830.1); Has 33057 Blast hits to 33030 proteins in 1682 species: Archae - 26; Bacteria - 4053; Metazoa - 14243; Fungi - 4538; Plants - 3212; Viruses - 96; Other Eukaryotes - 6889 (source: NCBI BLink). & (q84v18|stt7_chlre : 250.0) Serine/threonine-protein kinase stt7, chloroplast precursor (EC 2.7.11.1) - Chlamydomonas reinhardtii & (gnl|cdd|35814 : 185.0) no description available & (gnl|cdd|84488 : 98.8) no description available & (reliability: 1308.0) & (original description: Putative STN8, Description = Serine/threonine-protein kinase STN8, chloroplastic, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00083_462272-468539' '(at4g38520 : 621.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35919 : 413.0) no description available & (gnl|cdd|47660 : 182.0) no description available & (reliability: 1242.0) & (original description: Putative pp2C2, Description = Protein phosphatase 2C, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf00085_95578-103944' '(q9swb4|parp3_soybn : 1098.0) Poly [ADP-ribose] polymerase 3 (EC 2.4.2.30) (PARP-3) (ADPRT 3) (NAD(+) ADP-ribosyltransferase 3) (Poly[ADP-ribose] synthetase 3) - Glycine max (Soybean) & (at5g22470 : 1051.0) NAD+ ADP-ribosyltransferases;NAD+ ADP-ribosyltransferases; FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity; INVOLVED IN: protein amino acid ADP-ribosylation; LOCATED IN: intracellular, nucleus; CONTAINS InterPro DOMAIN/s: WGR (InterPro:IPR008893), Poly(ADP-ribose) polymerase, regulatory domain (InterPro:IPR004102), PADR1 (InterPro:IPR012982), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: poly(ADP-ribose) polymerase 2 (TAIR:AT2G31320.1); Has 672 Blast hits to 662 proteins in 152 species: Archae - 0; Bacteria - 20; Metazoa - 347; Fungi - 74; Plants - 111; Viruses - 2; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|30068 : 291.0) no description available & (gnl|cdd|36255 : 222.0) no description available & (reliability: 2102.0) & (original description: Putative PM38, Description = PARP, PFAM = PF00533;PF02877;PF08063;PF00644;PF05406)' T '29.4' 'protein.postranslational modification' 'niben101scf00087_14248-32596' '(at4g31860 : 594.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G25070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35916 : 239.0) no description available & (gnl|cdd|29062 : 234.0) no description available & (reliability: 1188.0) & (original description: Putative ptc2, Description = Protein phosphatase 2C, PFAM = PF00481;PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf00090_396558-404559' '(at5g09890 : 812.0) Protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT4G14350.2); Has 109819 Blast hits to 108536 proteins in 3259 species: Archae - 120; Bacteria - 13353; Metazoa - 38509; Fungi - 11858; Plants - 26725; Viruses - 411; Other Eukaryotes - 18843 (source: NCBI BLink). & (gnl|cdd|35825 : 669.0) no description available & (gnl|cdd|47550 : 272.0) no description available & (p47997|g11a_orysa : 172.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 1624.0) & (original description: Putative trc, Description = Serine/threonine-protein kinase CBK1, PFAM = PF00433;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00103_108244-117353' '(at5g01850 : 489.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase, ATN1-like (InterPro:IPR015784); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G27560.1); Has 131148 Blast hits to 129643 proteins in 5072 species: Archae - 162; Bacteria - 15033; Metazoa - 49603; Fungi - 12189; Plants - 33321; Viruses - 522; Other Eukaryotes - 20318 (source: NCBI BLink). & (gnl|cdd|35413 : 302.0) no description available & (gnl|cdd|87344 : 225.0) no description available & (q8l4h4|nork_medtr : 94.7) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 978.0) & (original description: Putative ATN1, Description = AT3g27560/MMJ24_11, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf00104_327591-331768' '(at3g63320 : 201.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G63340.1); Has 5123 Blast hits to 5121 proteins in 286 species: Archae - 0; Bacteria - 6; Metazoa - 1363; Fungi - 520; Plants - 2196; Viruses - 5; Other Eukaryotes - 1033 (source: NCBI BLink). & (gnl|cdd|35917 : 174.0) no description available & (gnl|cdd|29062 : 161.0) no description available & (reliability: 402.0) & (original description: Putative At3g63320, Description = AtPP2C50, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf00110_383012-420195' '(at3g62010 : 1913.0) unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages. & (reliability: 3826.0) & (original description: Putative Sb01g015540, Description = Putative uncharacterized protein Sb01g015540, PFAM = PF14566;PF14566;PF14566)' T '29.4' 'protein.postranslational modification' 'niben101scf00111_128504-135096' '(at3g53030 : 663.0) Encodes a protein kinase SRPK4 that specifically targets Arabidopsis Ser/Arg-rich (SR) slicing factors involved in RNA metabolism. In vitro kinase assay showed that SRPK4 phosphorylates the SR protein RSp31.; ser/arg-rich protein kinase 4 (SRPK4); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: response to oxidative stress, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G44850.1); Has 38460 Blast hits to 29477 proteins in 1034 species: Archae - 2; Bacteria - 1392; Metazoa - 15648; Fungi - 7270; Plants - 6510; Viruses - 16; Other Eukaryotes - 7622 (source: NCBI BLink). & (gnl|cdd|36504 : 650.0) no description available & (gnl|cdd|29142 : 98.7) no description available & (reliability: 1326.0) & (original description: Putative dsk1, Description = Protein kinase dsk1, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00121_11950-18180' '(p93340|gblp_nicpl : 594.0) Guanine nucleotide-binding protein subunit beta-like protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g18080 : 529.0) Encodes the Arabidopsis thaliana homolog of the tobacco WD-40 repeat ArcA gene.; ATARCA; FUNCTIONS IN: nucleotide binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosolic ribosome, chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B (TAIR:AT1G48630.1); Has 86693 Blast hits to 36128 proteins in 955 species: Archae - 98; Bacteria - 10140; Metazoa - 33986; Fungi - 19643; Plants - 11429; Viruses - 3; Other Eukaryotes - 11394 (source: NCBI BLink). & (gnl|cdd|35500 : 449.0) no description available & (gnl|cdd|29257 : 230.0) no description available & (reliability: 1050.0) & (original description: Putative ARCA, Description = Guanine nucleotide-binding protein subunit beta-like protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '29.4' 'protein.postranslational modification' 'niben101scf00126_558413-571491' '(at1g77720 : 662.0) Encodes a predicted protein kinase based on sequence similarity.; putative protein kinase 1 (PPK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: MAPK/ERK kinase kinase 3 (TAIR:AT4G08470.1); Has 102737 Blast hits to 99628 proteins in 3502 species: Archae - 97; Bacteria - 12996; Metazoa - 35733; Fungi - 11774; Plants - 22485; Viruses - 236; Other Eukaryotes - 19416 (source: NCBI BLink). & (gnl|cdd|35816 : 441.0) no description available & (gnl|cdd|47550 : 216.0) no description available & (p52389|cdc2_vigun : 100.0) Cell division control protein 2 homolog (EC 2.7.11.22) (EC 2.7.11.23) (p34cdc2) - Vigna unguiculata (Cowpea) & (reliability: 1324.0) & (original description: Putative PPK1, Description = At1g77720, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00133_654847-658935' '(at5g05510 : 384.0) Mad3/BUB1 homology region 1; CONTAINS InterPro DOMAIN/s: Mitotic checkpoint serine/threonine protein kinase, Bub1 (InterPro:IPR015661), Mad3/BUB1 homology region 1 (InterPro:IPR013212); BEST Arabidopsis thaliana protein match is: BUB1-related (BUB1: budding uninhibited by benzymidazol 1) (TAIR:AT2G33560.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36381 : 147.0) no description available & (gnl|cdd|87489 : 131.0) no description available & (reliability: 768.0) & (original description: Putative At5g05510, Description = At5g05510, PFAM = PF08311)' T '29.4' 'protein.postranslational modification' 'niben101scf00138_492306-496434' '(gnl|cdd|35830 : 633.0) no description available & (at1g79250 : 632.0) AGC kinase 1.7 (AGC1.7); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: root hair specific 3 (TAIR:AT1G16440.1). & (p47997|g11a_orysa : 501.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 158.0) no description available & (reliability: 1264.0) & (original description: Putative RHS3, Description = Serine/threonine-protein kinase RHS3, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00163_1715256-1724809' '(q9sec2|msra_lacsa : 370.0) Peptide methionine sulfoxide reductase (EC 1.8.4.11) (Protein-methionine-S-oxide reductase) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase) - Lactuca sativa (Garden lettuce) & (at4g25130 : 348.0) Encodes a chloroplast-localized methionine sulfoxide reductase that is a member of the MSRA family. Involved in protection of chloroplasts from oxidative stress.; peptide met sulfoxide reductase 4 (PMSR4); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: protein modification process, cellular response to oxidative stress; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Peptide methionine sulphoxide reductase MsrA (InterPro:IPR002569); BEST Arabidopsis thaliana protein match is: peptidemethionine sulfoxide reductase 1 (TAIR:AT5G61640.1); Has 10332 Blast hits to 10330 proteins in 2437 species: Archae - 129; Bacteria - 6211; Metazoa - 196; Fungi - 136; Plants - 235; Viruses - 1; Other Eukaryotes - 3424 (source: NCBI BLink). & (gnl|cdd|36848 : 300.0) no description available & (gnl|cdd|80482 : 227.0) no description available & (reliability: 696.0) & (original description: Putative msr, Description = Peptide-methionine (S)-S-oxide reductase, PFAM = PF01625)' T '29.4' 'protein.postranslational modification' 'niben101scf00168_1165860-1168858' '(at5g67080 : 251.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 19 (MAPKKK19); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, LP.06 six leaves visible, M germinated pollen stage, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 20 (TAIR:AT3G50310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35419 : 244.0) no description available & (gnl|cdd|29142 : 208.0) no description available & (p53682|cdpk1_orysa : 102.0) Calcium-dependent protein kinase, isoform 1 (EC 2.7.11.1) (CDPK 1) - Oryza sativa (Rice) & (reliability: 502.0) & (original description: Putative glysoja_003834, Description = Serine/threonine-protein kinase BCK1/SLK1/SSP31, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00177_911277-919523' '(gnl|cdd|36401 : 267.0) no description available & (at5g40380 : 194.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (CRK42); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (TAIR:AT1G70530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29142 : 172.0) no description available & (o24585|cri4_maize : 158.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 368.0) & (original description: Putative Sb08g000610, Description = Putative uncharacterized protein Sb08g000610, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00181_188401-192490' '(at5g16480 : 259.0) Phosphotyrosine protein phosphatases superfamily protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic (InterPro:IPR020428), Protein-tyrosine phosphatase, SIW14-like (InterPro:IPR004861); BEST Arabidopsis thaliana protein match is: Tyrosine phosphatase family protein (TAIR:AT3G02800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36785 : 215.0) no description available & (gnl|cdd|86260 : 176.0) no description available & (reliability: 518.0) & (original description: Putative At5g16480, Description = At5g16480, PFAM = PF03162)' T '29.4' 'protein.postranslational modification' 'niben101scf00182_489320-495261' '(at3g10572 : 241.0) 3-phosphoinositide-dependent protein kinase-1, putative; Has 32 Blast hits to 32 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative PGSC0003DMG400006457, Description = 3-phosphoinositide-dependent protein kinase-1, putative, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben101scf00201_44689-51613' '(at2g44680 : 417.0) Encodes casein kinase II beta chain, a CK2 regulatory subunit. Nuclear-localized CKB4 protein exists in vivo as different isoforms, resulting from phosphorylation on serine residues. The phosphorylated isoforms are the preferred substrate for ubiquitination and degradation by the proteasome pathway. Involved in regulation of circadian clock.; casein kinase II beta subunit 4 (CKB4); CONTAINS InterPro DOMAIN/s: Casein kinase II, regulatory subunit, alpha-helical (InterPro:IPR016149), Casein kinase II, regulatory subunit, beta-sheet (InterPro:IPR016150), Casein kinase II, regulatory subunit (InterPro:IPR000704); BEST Arabidopsis thaliana protein match is: casein kinase II beta chain 3 (TAIR:AT3G60250.2); Has 1093 Blast hits to 1091 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 429; Fungi - 285; Plants - 156; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (gnl|cdd|38302 : 356.0) no description available & (gnl|cdd|65042 : 306.0) no description available & (reliability: 834.0) & (original description: Putative CKB1, Description = Casein kinase II subunit beta, PFAM = PF01214)' T '29.4' 'protein.postranslational modification' 'niben101scf00209_147184-150482' '(at4g30960 : 620.0) Encodes CBL-interacting protein kinase 6 (CIPK6). Required for development and salt tolerance.; SOS3-interacting protein 3 (SIP3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 20 (TAIR:AT5G45820.1); Has 129448 Blast hits to 127362 proteins in 4509 species: Archae - 159; Bacteria - 15496; Metazoa - 47121; Fungi - 13315; Plants - 31167; Viruses - 523; Other Eukaryotes - 21667 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 439.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 339.0) no description available & (gnl|cdd|29142 : 289.0) no description available & (reliability: 1240.0) & (original description: Putative CIPK6, Description = CBL-interacting serine/threonine-protein kinase 6, PFAM = PF00069;PF03822)' T '29.4' 'protein.postranslational modification' 'niben101scf00212_378590-386505' '(at1g16900 : 764.0) curculin-like (mannose-binding) lectin family protein, very low similarity to Ser Thr protein kinase GI:2598067 from (Zea mays); contains Pfam lectin (probable mannose binding) domain PF01453 but not the protein kinase domain of the Z. mays protein; Alg9-like mannosyltransferase family; FUNCTIONS IN: sugar binding, transferase activity, transferring glycosyl groups; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Alg9-like mannosyltransferase (InterPro:IPR005599); BEST Arabidopsis thaliana protein match is: Alg9-like mannosyltransferase family (TAIR:AT5G14850.2); Has 817 Blast hits to 803 proteins in 193 species: Archae - 0; Bacteria - 22; Metazoa - 302; Fungi - 301; Plants - 91; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (gnl|cdd|37726 : 534.0) no description available & (gnl|cdd|86471 : 277.0) no description available & (reliability: 1528.0) & (original description: Putative ALG9, Description = Dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase, PFAM = PF03901)' T '29.4' 'protein.postranslational modification' 'niben101scf00213_120710-125052' '(at5g60900 : 376.0) Encodes a receptor-like protein kinase.; receptor-like protein kinase 1 (RLK1); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: lectin protein kinase family protein (TAIR:AT1G34300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 323.0) no description available & (p17801|kpro_maize : 318.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 187.0) no description available & (reliability: 752.0) & (original description: Putative Sb03g046880, Description = Serine/threonine-protein kinase, PFAM = PF00954;PF00069;PF01453)' T '29.4' 'protein.postranslational modification' 'niben101scf00231_262270-266355' '(at1g67820 : 152.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G30020.1); Has 6733 Blast hits to 6560 proteins in 362 species: Archae - 6; Bacteria - 120; Metazoa - 1758; Fungi - 815; Plants - 2713; Viruses - 9; Other Eukaryotes - 1312 (source: NCBI BLink). & (gnl|cdd|47660 : 91.3) no description available & (gnl|cdd|35917 : 84.1) no description available & (reliability: 304.0) & (original description: Putative GM, Description = AtPP2C14, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf00231_709917-716896' '(at1g10630 : 364.0) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.; ADP-ribosylation factor A1F (ARFA1F); FUNCTIONS IN: phospholipase activator activity, GTP binding, copper ion binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT2G47170.1); Has 15022 Blast hits to 15003 proteins in 509 species: Archae - 14; Bacteria - 51; Metazoa - 7710; Fungi - 1942; Plants - 2027; Viruses - 3; Other Eukaryotes - 3275 (source: NCBI BLink). & (p51823|arf2_orysa : 364.0) ADP-ribosylation factor 2 - Oryza sativa (Rice) & (gnl|cdd|47508 : 333.0) no description available & (gnl|cdd|35293 : 319.0) no description available & (reliability: 728.0) & (original description: Putative ARF, Description = ADP-ribosylation factor 2, PFAM = PF00025)' T '29.4' 'protein.postranslational modification' 'niben101scf00248_264809-268137' '(at3g23000 : 438.0) Encodes a serine/threonine protein kinase with similarities to CBL-interacting protein kinases, SNF1 and SOS2.; CBL-interacting protein kinase 7 (CIPK7); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to fructose stimulus, response to sucrose stimulus, response to glucose stimulus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 4 (TAIR:AT4G14580.1); Has 129268 Blast hits to 127250 proteins in 4353 species: Archae - 172; Bacteria - 15520; Metazoa - 47044; Fungi - 13122; Plants - 31560; Viruses - 528; Other Eukaryotes - 21322 (source: NCBI BLink). & (gnl|cdd|35803 : 319.0) no description available & (q6x4a2|cipk1_orysa : 305.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|29142 : 275.0) no description available & (reliability: 876.0) & (original description: Putative CIPK7, Description = CBL-interacting serine/threonine-protein kinase 7, PFAM = PF03822;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00261_70079-73185' '(gnl|cdd|35419 : 223.0) no description available & (at5g67080 : 212.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 19 (MAPKKK19); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, LP.06 six leaves visible, M germinated pollen stage, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 20 (TAIR:AT3G50310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47550 : 209.0) no description available & (p28582|cdpk_dauca : 110.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 424.0) & (original description: Putative MAPKKK19, Description = Mitogen-activated protein kinase kinase kinase A, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00276_542544-554347' '(at1g09720 : 333.0) Kinase interacting (KIP1-like) family protein; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: kinase interacting family protein (TAIR:AT1G58210.1); Has 36531 Blast hits to 24166 proteins in 1497 species: Archae - 615; Bacteria - 4202; Metazoa - 18004; Fungi - 3193; Plants - 2001; Viruses - 107; Other Eukaryotes - 8409 (source: NCBI BLink). & (gnl|cdd|71206 : 130.0) no description available & (reliability: 666.0) & (original description: Putative BnaA09g42470D, Description = BnaA09g42470D protein, PFAM = PF07765)' T '29.4' 'protein.postranslational modification' 'niben101scf00288_1836601-1842005' '(at5g58520 : 805.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G07140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35413 : 225.0) no description available & (gnl|cdd|87344 : 144.0) no description available & (reliability: 1610.0) & (original description: Putative At5g58520, Description = Protein kinase family protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf00297_9725-12737' '(at4g21860 : 216.0) methionine sulfoxide reductase B 2 (MSRB2); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B3 (TAIR:AT4G04800.1). & (gnl|cdd|36074 : 200.0) no description available & (gnl|cdd|85585 : 175.0) no description available & (reliability: 432.0) & (original description: Putative msr1, Description = Methionine sulfoxide reductase, PFAM = PF01641)' T '29.4' 'protein.postranslational modification' 'niben101scf00302_292950-298303' '(at3g02750 : 352.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G36250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35917 : 212.0) no description available & (gnl|cdd|29062 : 195.0) no description available & (reliability: 704.0) & (original description: Putative At5g01700, Description = Probable protein phosphatase 2C 65, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf00318_494727-504101' '(at2g40120 : 575.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G73460.1); Has 88242 Blast hits to 86864 proteins in 3207 species: Archae - 89; Bacteria - 10122; Metazoa - 34089; Fungi - 11944; Plants - 14453; Viruses - 383; Other Eukaryotes - 17162 (source: NCBI BLink). & (gnl|cdd|35886 : 397.0) no description available & (gnl|cdd|29142 : 196.0) no description available & (q5sn53|mpk8_orysa : 134.0) Mitogen-activated protein kinase 8 (EC 2.7.11.24) (MAP kinase 8) (OsWJUMK1) (Wound- and JA-uninducible MAP kinase 1) - Oryza sativa (Rice) & (reliability: 1150.0) & (original description: Putative DYRK2, Description = Dual-specificity tyrosine regulated protein kinase 2, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00332_1145595-1150470' '(at3g62290 : 367.0) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.; ADP-ribosylation factor A1E (ARFA1E); CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), Ras small GTPase, Rab type (InterPro:IPR003579), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT2G47170.1). & (p51823|arf2_orysa : 360.0) ADP-ribosylation factor 2 - Oryza sativa (Rice) & (gnl|cdd|47508 : 334.0) no description available & (gnl|cdd|35293 : 316.0) no description available & (reliability: 732.0) & (original description: Putative ARF1, Description = ADP-ribosylation factor 1, PFAM = PF00025)' T '29.4' 'protein.postranslational modification' 'niben101scf00338_1087367-1095357' '(at3g19980 : 646.0) Encodes catalytic subunit of serine/threonine protein phosphatase 2A. It can associate with phytochromes A and B in vitro. Mutant plants display an accelerated flowering phenotype.; "flower-specific, phytochrome-associated protein phosphatase 3" (FYPP3); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT1G50370.1); Has 6822 Blast hits to 6670 proteins in 515 species: Archae - 81; Bacteria - 277; Metazoa - 2341; Fungi - 1410; Plants - 975; Viruses - 8; Other Eukaryotes - 1730 (source: NCBI BLink). & (gnl|cdd|35594 : 586.0) no description available & (q9xgt7|pp2a3_orysa : 389.0) Serine/threonine-protein phosphatase PP2A-3 catalytic subunit (EC 3.1.3.16) - Oryza sativa (Rice) & (gnl|cdd|29063 : 346.0) no description available & (reliability: 1292.0) & (original description: Putative FYPP3, Description = Phytochrome-associated serine/threonine-protein phosphatase 3, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'niben101scf00360_156349-161834' '(at4g31860 : 117.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G25070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35918 : 99.8) no description available & (reliability: 234.0) & (original description: Putative ppm1g, Description = Protein phosphatase 1G, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf00369_2160156-2164650' '(at5g27930 : 526.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G05640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35917 : 197.0) no description available & (gnl|cdd|29062 : 188.0) no description available & (reliability: 1052.0) & (original description: Putative npp2c1, Description = Phosphatase 2C family protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf00381_763149-784891' '(at2g17520 : 605.0) Encodes a endoribonuclease/protein kinase IRE1-like protein that is predicted to form a type I transmembrane protein structure and contain kinase/endoribonuclease domains at their C-terminal halves. The transcript levels for several ER-stress responsive genes, including six protein disulfide isomerases (PDIs), BiP2, and AtbZIP60 are not affected in ire1-2 null mutants.; IRE1A; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), KEN domain, ribonuclease activator (InterPro:IPR010513), PUG domain (InterPro:IPR006567), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: inositol requiring 1-1 (TAIR:AT5G24360.1); Has 104790 Blast hits to 103944 proteins in 4127 species: Archae - 110; Bacteria - 12550; Metazoa - 37627; Fungi - 10369; Plants - 27162; Viruses - 328; Other Eukaryotes - 16644 (source: NCBI BLink). & (gnl|cdd|36245 : 513.0) no description available & (gnl|cdd|69972 : 179.0) no description available & (reliability: 1210.0) & (original description: Putative ERN1, Description = Serine/threonine-protein kinase/endoribonuclease ire-1, PFAM = PF00069;PF06479)' T '29.4' 'protein.postranslational modification' 'niben101scf00381_834977-839944' '(at3g51470 : 415.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G33700.1); Has 7043 Blast hits to 7008 proteins in 640 species: Archae - 12; Bacteria - 714; Metazoa - 1616; Fungi - 683; Plants - 2691; Viruses - 9; Other Eukaryotes - 1318 (source: NCBI BLink). & (gnl|cdd|35917 : 242.0) no description available & (gnl|cdd|29062 : 233.0) no description available & (reliability: 830.0) & (original description: Putative At3g51470, Description = Probable protein phosphatase 2C 47, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf00381_949362-954373' '(at2g17530 : 661.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G35500.1). & (gnl|cdd|36504 : 309.0) no description available & (gnl|cdd|29142 : 106.0) no description available & (reliability: 1322.0) & (original description: Putative srpk2, Description = At2g17530, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00389_263914-284299' '(at3g10540 : 768.0) 3-phosphoinositide-dependent protein kinase; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-1, 3-phosphoinositide dependent (InterPro:IPR015746), Protein kinase, catalytic domain (InterPro:IPR000719), Pleckstrin homology-type (InterPro:IPR011993); BEST Arabidopsis thaliana protein match is: 3'-phosphoinositide-dependent protein kinase 1 (TAIR:AT5G04510.1); Has 127579 Blast hits to 125597 proteins in 4638 species: Archae - 184; Bacteria - 15229; Metazoa - 47076; Fungi - 13122; Plants - 29847; Viruses - 648; Other Eukaryotes - 21473 (source: NCBI BLink). & (gnl|cdd|35812 : 531.0) no description available & (gnl|cdd|29142 : 282.0) no description available & (q6x4a2|cipk1_orysa : 145.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1536.0) & (original description: Putative PDPK2, Description = 3-phosphoinositide-dependent protein kinase 2, PFAM = PF14593;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00397_655041-658270' '(at3g60550 : 316.0) cyclin p3;2 (CYCP3;2); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin-related 2 (InterPro:IPR013922); BEST Arabidopsis thaliana protein match is: cyclin p3;1 (TAIR:AT2G45080.1); Has 1360 Blast hits to 1354 proteins in 218 species: Archae - 0; Bacteria - 18; Metazoa - 236; Fungi - 630; Plants - 217; Viruses - 0; Other Eukaryotes - 259 (source: NCBI BLink). & (gnl|cdd|36887 : 160.0) no description available & (gnl|cdd|72038 : 108.0) no description available & (reliability: 632.0) & (original description: Putative Sb34, Description = Cyclin p4, PFAM = PF08613)' T '29.4' 'protein.postranslational modification' 'niben101scf00421_127484-132595' '(at4g01370 : 671.0) Encodes a nuclear and cytoplasmically localized MAP kinase involved in mediating responses to pathogens. Its substrates include MKS1 and probably MAP65-1.The MAP65-1 interaction is involved in mediating cortical microtuble organization.; MAP kinase 4 (MPK4); FUNCTIONS IN: MAP kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), JNK MAP kinase (InterPro:IPR008351), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: MAP kinase 11 (TAIR:AT1G01560.2); Has 123445 Blast hits to 122024 proteins in 4656 species: Archae - 100; Bacteria - 13145; Metazoa - 47072; Fungi - 12439; Plants - 29862; Viruses - 477; Other Eukaryotes - 20350 (source: NCBI BLink). & (q40353|mmk2_medsa : 662.0) Mitogen-activated protein kinase homolog MMK2 (EC 2.7.11.24) - Medicago sativa (Alfalfa) & (gnl|cdd|35879 : 526.0) no description available & (gnl|cdd|29142 : 268.0) no description available & (reliability: 1220.0) & (original description: Putative MPK4, Description = Mitogen-activated protein kinase 4, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00448_491295-494329' '(at5g55090 : 318.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 15 (MAPKKK15); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 16 (TAIR:AT4G26890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35419 : 288.0) no description available & (gnl|cdd|29142 : 242.0) no description available & (q5qn75|m2k1_orysa : 117.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 636.0) & (original description: Putative BnaC04g12300D, Description = BnaC04g12300D protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00478_667314-688324' '(at4g31860 : 595.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G25070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35916 : 239.0) no description available & (gnl|cdd|29062 : 231.0) no description available & (reliability: 1190.0) & (original description: Putative ptc2, Description = Protein phosphatase 2C, PFAM = PF00481;PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf00491_369530-377289' '(at3g25800 : 727.0) one of three genes encoding the protein phosphatase 2A regulatory subunit; protein phosphatase 2A subunit A2 (PP2AA2); FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: response to cadmium ion, regulation of phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A subunit A3 (TAIR:AT1G13320.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p36875|2aaa_pea : 487.0) Protein phosphatase PP2A regulatory subunit A (PR65) (Fragment) - Pisum sativum (Garden pea) & (gnl|cdd|35432 : 474.0) no description available & (reliability: 1454.0) & (original description: Putative PP2AA2, Description = Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform, PFAM = PF02985;PF02985)' T '29.4' 'protein.postranslational modification' 'niben101scf00504_715937-721290' '(at4g03415 : 620.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G03590.1). & (gnl|cdd|35917 : 206.0) no description available & (gnl|cdd|29062 : 182.0) no description available & (reliability: 1240.0) & (original description: Putative At4g03415, Description = Probable protein phosphatase 2C 52, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf00508_1081499-1095852' '(at4g29380 : 1981.0) protein kinase family protein / WD-40 repeat family protein; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), WD40 repeat 2 (InterPro:IPR019782), Armadillo-like helical (InterPro:IPR011989), WD40 repeat (InterPro:IPR001680), HEAT, type 2 (InterPro:IPR021133), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), WD40 repeat-like-containing domain (InterPro:IPR011046), Protein kinase, catalytic domain (InterPro:IPR000719), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G33770.1); Has 29441 Blast hits to 28057 proteins in 1177 species: Archae - 18; Bacteria - 2884; Metazoa - 11045; Fungi - 5111; Plants - 4360; Viruses - 46; Other Eukaryotes - 5977 (source: NCBI BLink). & (gnl|cdd|36454 : 1332.0) no description available & (gnl|cdd|29142 : 121.0) no description available & (reliability: 3962.0) & (original description: Putative ppk19, Description = Phosphoinositide 3-kinase regulatory subunit 4, PFAM = PF00400;PF00400;PF00069;PF02985)' T '29.4' 'protein.postranslational modification' 'niben101scf00508_1090298-1095750' '(at4g29380 : 359.0) protein kinase family protein / WD-40 repeat family protein; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), WD40 repeat 2 (InterPro:IPR019782), Armadillo-like helical (InterPro:IPR011989), WD40 repeat (InterPro:IPR001680), HEAT, type 2 (InterPro:IPR021133), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), WD40 repeat-like-containing domain (InterPro:IPR011046), Protein kinase, catalytic domain (InterPro:IPR000719), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G33770.1); Has 29441 Blast hits to 28057 proteins in 1177 species: Archae - 18; Bacteria - 2884; Metazoa - 11045; Fungi - 5111; Plants - 4360; Viruses - 46; Other Eukaryotes - 5977 (source: NCBI BLink). & (gnl|cdd|36454 : 338.0) no description available & (gnl|cdd|47550 : 81.8) no description available & (reliability: 718.0) & (original description: Putative PI3R4, Description = PI3R4, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00509_432116-439999' '(at5g60550 : 515.0) Encodes a geminivirus Rep interacting kinase (GRIK; GRIK1/AT3G45240, GRIK2/AT5G60550). GRIKs are SnRK1 (SNF1-related kinases) activating kinases. Both GRIKs specifically bind to the SnRK1 catalytic subunit and phosphorylate the equivalent threonine residue in its activation loop in vitro.; geminivirus rep interacting kinase 2 (GRIK2); CONTAINS InterPro DOMAIN/s: Calcium/calmodulin-dependent protein kinase kinase (InterPro:IPR020657), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: geminivirus rep interacting kinase 1 (TAIR:AT3G45240.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35805 : 375.0) no description available & (gnl|cdd|29142 : 242.0) no description available & (q6x4a2|cipk1_orysa : 141.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1030.0) & (original description: Putative GRIK2, Description = Serine/threonine-protein kinase GRIK2, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00520_1239411-1242655' '(at5g55090 : 320.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 15 (MAPKKK15); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 16 (TAIR:AT4G26890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35419 : 284.0) no description available & (gnl|cdd|29142 : 238.0) no description available & (q5qn75|m2k1_orysa : 110.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 640.0) & (original description: Putative MAPKKK17, Description = Mitogen-activated protein kinase kinase kinase 17, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00530_884865-893538' '(at5g53140 : 442.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G10740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35917 : 252.0) no description available & (gnl|cdd|29062 : 244.0) no description available & (reliability: 884.0) & (original description: Putative WIN2, Description = Probable protein phosphatase 2C 59, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf00530_1047619-1057309' '(at3g11410 : 251.0) Encodes protein phosphatase 2C. Negative regulator of ABA signalling. Expressed in seeds during germination. mRNA up-regulated by drought and ABA.; protein phosphatase 2CA (PP2CA); FUNCTIONS IN: protein binding, protein serine/threonine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 6 processes; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 2 (TAIR:AT1G07430.1); Has 6894 Blast hits to 6854 proteins in 510 species: Archae - 4; Bacteria - 413; Metazoa - 1689; Fungi - 773; Plants - 2747; Viruses - 7; Other Eukaryotes - 1261 (source: NCBI BLink). & (gnl|cdd|29062 : 242.0) no description available & (gnl|cdd|35917 : 235.0) no description available & (reliability: 502.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf00530_1047625-1057258' '(at3g11410 : 236.0) Encodes protein phosphatase 2C. Negative regulator of ABA signalling. Expressed in seeds during germination. mRNA up-regulated by drought and ABA.; protein phosphatase 2CA (PP2CA); FUNCTIONS IN: protein binding, protein serine/threonine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 6 processes; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 2 (TAIR:AT1G07430.1); Has 6894 Blast hits to 6854 proteins in 510 species: Archae - 4; Bacteria - 413; Metazoa - 1689; Fungi - 773; Plants - 2747; Viruses - 7; Other Eukaryotes - 1261 (source: NCBI BLink). & (gnl|cdd|29062 : 234.0) no description available & (gnl|cdd|35917 : 229.0) no description available & (reliability: 472.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf00543_260582-268667' '(at1g10430 : 640.0) Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].; protein phosphatase 2A-2 (PP2A-2); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A-2 (TAIR:AT1G59830.1); Has 6751 Blast hits to 6569 proteins in 471 species: Archae - 80; Bacteria - 183; Metazoa - 2378; Fungi - 1410; Plants - 970; Viruses - 5; Other Eukaryotes - 1725 (source: NCBI BLink). & (q9zse4|pp2a_hevbr : 639.0) Serine/threonine-protein phosphatase PP2A catalytic subunit (EC 3.1.3.16) - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|35592 : 553.0) no description available & (gnl|cdd|29063 : 376.0) no description available & (reliability: 1280.0) & (original description: Putative PP2A2, Description = Serine/threonine-protein phosphatase PP2A-2 catalytic subunit, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'niben101scf00560_1161430-1167026' '(at4g21390 : 863.0) B120; FUNCTIONS IN: protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61610.1); Has 119638 Blast hits to 117946 proteins in 4361 species: Archae - 104; Bacteria - 13356; Metazoa - 43759; Fungi - 9937; Plants - 34742; Viruses - 415; Other Eukaryotes - 17325 (source: NCBI BLink). & (gnl|cdd|36401 : 332.0) no description available & (p17840|slsg3_braol : 263.0) S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage) & (gnl|cdd|47549 : 175.0) no description available & (reliability: 1654.0) & (original description: Putative B120, Description = G-type lectin S-receptor-like serine/threonine-protein kinase B120, PFAM = PF01453;PF00954;PF08276;PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf00571_540722-551710' '(q9xgh7|pp2a_tobac : 676.0) Serine/threonine-protein phosphatase PP2A catalytic subunit (EC 3.1.3.16) - Nicotiana tabacum (Common tobacco) & (at3g58500 : 629.0) Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].; protein phosphatase 2A-4 (PP2A-4); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A-3 (TAIR:AT2G42500.1); Has 6816 Blast hits to 6628 proteins in 481 species: Archae - 80; Bacteria - 203; Metazoa - 2402; Fungi - 1409; Plants - 984; Viruses - 3; Other Eukaryotes - 1735 (source: NCBI BLink). & (gnl|cdd|35592 : 551.0) no description available & (gnl|cdd|29063 : 407.0) no description available & (reliability: 1258.0) & (original description: Putative PP2A2, Description = Serine/threonine-protein phosphatase PP2A-2 catalytic subunit, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'niben101scf00574_945399-954536' '(at1g10430 : 639.0) Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].; protein phosphatase 2A-2 (PP2A-2); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A-2 (TAIR:AT1G59830.1); Has 6751 Blast hits to 6569 proteins in 471 species: Archae - 80; Bacteria - 183; Metazoa - 2378; Fungi - 1410; Plants - 970; Viruses - 5; Other Eukaryotes - 1725 (source: NCBI BLink). & (q9zse4|pp2a_hevbr : 638.0) Serine/threonine-protein phosphatase PP2A catalytic subunit (EC 3.1.3.16) - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|35592 : 549.0) no description available & (gnl|cdd|29063 : 377.0) no description available & (reliability: 1278.0) & (original description: Putative PP2A2, Description = Serine/threonine-protein phosphatase PP2A-2 catalytic subunit, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'niben101scf00577_395826-405644' '(at3g25840 : 658.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G13350.1); Has 128768 Blast hits to 102988 proteins in 2920 species: Archae - 165; Bacteria - 11507; Metazoa - 55869; Fungi - 16191; Plants - 15087; Viruses - 722; Other Eukaryotes - 29227 (source: NCBI BLink). & (gnl|cdd|35889 : 569.0) no description available & (gnl|cdd|47550 : 188.0) no description available & (q40532|ntf4_tobac : 122.0) Mitogen-activated protein kinase homolog NTF4 (EC 2.7.11.24) (P45) - Nicotiana tabacum (Common tobacco) & (reliability: 1316.0) & (original description: Putative PRP4, Description = Serine/threonine protein kinase, CMGC family, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00600_68820-73858' '(gnl|cdd|85563 : 737.0) no description available & (at3g26020 : 713.0) Encodes protein phosphatase 2A (PP2A) B'eta subunit. Targeted to nucleus and cytosol.; Protein phosphatase 2A regulatory B subunit family protein; FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: cytosol, nucleus, protein phosphatase type 2A complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT1G13460.2); Has 1197 Blast hits to 1175 proteins in 189 species: Archae - 0; Bacteria - 2; Metazoa - 578; Fungi - 161; Plants - 301; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|37296 : 672.0) no description available & (reliability: 1426.0) & (original description: Putative B'ETA, Description = Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform, PFAM = PF01603)' T '29.4' 'protein.postranslational modification' 'niben101scf00603_414245-419736' '(at4g00720 : 737.0) Encodes ASKtheta, a group III Arabidopsis GSK3/shaggy-like kinase. Functions in the brassinosteroid signalling pathway.; shaggy-like protein kinase 32 (SK32); FUNCTIONS IN: kinase activity; INVOLVED IN: response to brassinosteroid stimulus; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: shaggy-like kinase 13 (TAIR:AT5G14640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o04160|ksgt_brana : 704.0) Shaggy-related protein kinase theta (EC 2.7.11.1) (ASK-theta) - Brassica napus (Rape) & (gnl|cdd|35877 : 563.0) no description available & (gnl|cdd|29142 : 225.0) no description available & (reliability: 1474.0) & (original description: Putative ASK8, Description = Shaggy-related protein kinase theta, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00611_819141-824598' '(at5g57050 : 390.0) Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo.; ABA INSENSITIVE 2 (ABI2); CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G26080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35917 : 239.0) no description available & (gnl|cdd|47660 : 225.0) no description available & (reliability: 780.0) & (original description: Putative ABI2, Description = Protein phosphatase 2C 77, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf00611_955174-964177' '(at5g57035 : 741.0) U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination, response to stress; LOCATED IN: ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT2G19410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 263.0) no description available & (gnl|cdd|29142 : 162.0) no description available & (q8lpb4|pskr_dauca : 147.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1482.0) & (original description: Putative PUB34, Description = U-box domain-containing protein 34, PFAM = PF07714;PF04564;PF00582)' T '29.4' 'protein.postranslational modification' 'niben101scf00611_1174842-1190364' '(at1g72710 : 616.0) Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus.; casein kinase 1-like protein 2 (CKL2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase 1 (TAIR:AT4G26100.1); Has 69362 Blast hits to 63919 proteins in 2309 species: Archae - 34; Bacteria - 10202; Metazoa - 23661; Fungi - 6612; Plants - 12027; Viruses - 386; Other Eukaryotes - 16440 (source: NCBI BLink). & (gnl|cdd|36378 : 493.0) no description available & (gnl|cdd|29142 : 163.0) no description available & (reliability: 1232.0) & (original description: Putative ckl5, Description = Casein kinase I isoform delta-like protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00621_484395-752379' '(at3g06270 : 516.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases (TAIR:AT2G20050.1); Has 5674 Blast hits to 5652 proteins in 402 species: Archae - 6; Bacteria - 206; Metazoa - 1330; Fungi - 548; Plants - 2474; Viruses - 4; Other Eukaryotes - 1106 (source: NCBI BLink). & (gnl|cdd|35917 : 181.0) no description available & (gnl|cdd|29062 : 168.0) no description available & (reliability: 1032.0) & (original description: Putative At3g06270, Description = Probable protein phosphatase 2C 35, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf00621_727247-731522' '(at4g21860 : 221.0) methionine sulfoxide reductase B 2 (MSRB2); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B3 (TAIR:AT4G04800.1). & (gnl|cdd|36074 : 200.0) no description available & (gnl|cdd|85585 : 173.0) no description available & (reliability: 442.0) & (original description: Putative MSRB7, Description = Peptide methionine sulfoxide reductase B7, PFAM = PF01641)' T '29.4' 'protein.postranslational modification' 'niben101scf00638_182271-186706' '(at4g32300 : 993.0) S-domain-2 5 (SD2-5); FUNCTIONS IN: carbohydrate binding, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid autophosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT5G35370.1); Has 119450 Blast hits to 117822 proteins in 4317 species: Archae - 101; Bacteria - 12813; Metazoa - 43689; Fungi - 10139; Plants - 34770; Viruses - 395; Other Eukaryotes - 17543 (source: NCBI BLink). & (gnl|cdd|36401 : 348.0) no description available & (p17801|kpro_maize : 264.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 174.0) no description available & (reliability: 1986.0) & (original description: Putative SD25, Description = G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5, PFAM = PF00069;PF01453)' T '29.4' 'protein.postranslational modification' 'niben101scf00652_179553-185866' '(at5g27930 : 514.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G05640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35917 : 196.0) no description available & (gnl|cdd|29062 : 189.0) no description available & (reliability: 1028.0) & (original description: Putative npp2c1, Description = Phosphatase 2C family protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf00689_41408-47838' '(at4g38520 : 604.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35919 : 412.0) no description available & (gnl|cdd|47660 : 181.0) no description available & (reliability: 1208.0) & (original description: Putative pp2C2, Description = Serine/threonine phosphatase family, 2C domain protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf00709_741635-749571' '(gnl|cdd|35887 : 606.0) no description available & (at5g67380 : 598.0) casein kinase II catalytic subunit alpha; casein kinase alpha 1 (CKA1); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase II, alpha chain 2 (TAIR:AT3G50000.1); Has 73369 Blast hits to 72658 proteins in 2362 species: Archae - 60; Bacteria - 7223; Metazoa - 28693; Fungi - 10783; Plants - 10981; Viruses - 246; Other Eukaryotes - 15383 (source: NCBI BLink). & (p28523|csk2a_maize : 573.0) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II) (CK2-alpha) - Zea mays (Maize) & (gnl|cdd|84488 : 203.0) no description available & (reliability: 1196.0) & (original description: Putative CKA1, Description = Casein kinase II subunit alpha-1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00713_458144-468047' '(at3g53710 : 420.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ARF-GAP domain 6 (AGD6); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 7 (TAIR:AT2G37550.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35923 : 293.0) no description available & (gnl|cdd|85433 : 141.0) no description available & (reliability: 820.0) & (original description: Putative AGD6, Description = Probable ADP-ribosylation factor GTPase-activating protein AGD6, PFAM = PF01412)' T '29.4' 'protein.postranslational modification' 'niben101scf00715_546172-549503' '(at5g10930 : 543.0) Encodes CBL-interacting protein kinase 5 (CIPK5).; CBL-interacting protein kinase 5 (CIPK5); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 25 (TAIR:AT5G25110.1); Has 132030 Blast hits to 129710 proteins in 4599 species: Archae - 195; Bacteria - 15419; Metazoa - 48583; Fungi - 13177; Plants - 32322; Viruses - 524; Other Eukaryotes - 21810 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 384.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 346.0) no description available & (gnl|cdd|29142 : 301.0) no description available & (reliability: 1086.0) & (original description: Putative CIPK16, Description = CBL-interacting protein kinase 16, PFAM = PF00069;PF03822)' T '29.4' 'protein.postranslational modification' 'niben101scf00721_45621-52798' '(at5g53340 : 432.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G32120.1); Has 782 Blast hits to 773 proteins in 80 species: Archae - 0; Bacteria - 0; Metazoa - 225; Fungi - 0; Plants - 529; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|37499 : 295.0) no description available & (gnl|cdd|85659 : 106.0) no description available & (reliability: 864.0) & (original description: Putative HPTG1, Description = Hydroxyproline O-galactosyltransferase HPGT1, PFAM = PF01762;PF13334)' T '29.4' 'protein.postranslational modification' 'niben101scf00721_45910-55366' '(at5g53340 : 424.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G32120.1); Has 782 Blast hits to 773 proteins in 80 species: Archae - 0; Bacteria - 0; Metazoa - 225; Fungi - 0; Plants - 529; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|37499 : 298.0) no description available & (gnl|cdd|85659 : 107.0) no description available & (reliability: 848.0) & (original description: Putative HPGT2, Description = Hexosyltransferase, PFAM = PF01762)' T '29.4' 'protein.postranslational modification' 'niben101scf00735_6280-14623' '(at3g12200 : 353.0) Encodes AtNek7, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.; NIMA-related kinase 7 (Nek7); FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: NIMA-related kinase 5 (TAIR:AT3G20860.1). & (gnl|cdd|35809 : 306.0) no description available & (gnl|cdd|29142 : 213.0) no description available & (q5qn75|m2k1_orysa : 83.2) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 706.0) & (original description: Putative stkc, Description = Serine/threonine-protein kinase Nek5, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00739_174351-179162' '(gnl|cdd|35830 : 521.0) no description available & (at2g26700 : 520.0) Encodes PID2, a homolog of PID. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons.; PINOID2 (PID2); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 2 (TAIR:AT5G47750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p47997|g11a_orysa : 396.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 187.0) no description available & (reliability: 1040.0) & (original description: Putative PID2, Description = Protein kinase PINOID 2, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00744_302781-312735' '(at4g24480 : 1019.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G03730.1); Has 116789 Blast hits to 115063 proteins in 4587 species: Archae - 100; Bacteria - 12435; Metazoa - 44447; Fungi - 10166; Plants - 32138; Viruses - 424; Other Eukaryotes - 17079 (source: NCBI BLink). & (gnl|cdd|35413 : 319.0) no description available & (gnl|cdd|87344 : 235.0) no description available & (q8lkz1|nork_pea : 119.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 2038.0) & (original description: Putative CTR3, Description = Constitutive triple response 3, PFAM = PF14381;PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf00747_104376-114790' '(at1g72710 : 647.0) Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus.; casein kinase 1-like protein 2 (CKL2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase 1 (TAIR:AT4G26100.1); Has 69362 Blast hits to 63919 proteins in 2309 species: Archae - 34; Bacteria - 10202; Metazoa - 23661; Fungi - 6612; Plants - 12027; Viruses - 386; Other Eukaryotes - 16440 (source: NCBI BLink). & (gnl|cdd|36378 : 492.0) no description available & (gnl|cdd|29142 : 158.0) no description available & (reliability: 1294.0) & (original description: Putative 32735, Description = Predicted protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00747_134098-137393' '(at5g57020 : 738.0) Arabidopsis thaliana myristoyl-CoA:protein N-myristoyltransferase.; myristoyl-CoA:protein N-myristoyltransferase (NMT1); CONTAINS InterPro DOMAIN/s: Myristoyl-CoA:protein N-myristoyltransferase (InterPro:IPR000903), Myristoyl-CoA:protein N-myristoyltransferase, conserved site (InterPro:IPR022678), Myristoyl-CoA:protein N-myristoyltransferase, N-terminal (InterPro:IPR022676), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Myristoyl-CoA:protein N-myristoyltransferase, C-terminal (InterPro:IPR022677); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G44175.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37990 : 610.0) no description available & (gnl|cdd|34695 : 417.0) no description available & (reliability: 1476.0) & (original description: Putative NMT1, Description = Glycylpeptide N-tetradecanoyltransferase 1, PFAM = PF01233;PF02799)' T '29.4' 'protein.postranslational modification' 'niben101scf00779_51562-54884' '(at5g58380 : 535.0) Encodes a CBL-interacting protein kinase with similarity to SOS protein kinase.; SOS3-interacting protein 1 (SIP1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 2 (TAIR:AT5G07070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 399.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 344.0) no description available & (gnl|cdd|29142 : 281.0) no description available & (reliability: 1070.0) & (original description: Putative CIPK18, Description = CBL-interacting protein kinase 18, PFAM = PF00069;PF03822)' T '29.4' 'protein.postranslational modification' 'niben101scf00780_324833-331099' '(at4g38520 : 615.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35919 : 411.0) no description available & (gnl|cdd|47660 : 182.0) no description available & (reliability: 1230.0) & (original description: Putative pp2C2, Description = Serine/threonine phosphatase family, 2C domain protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf00806_189909-193502' '(at3g11410 : 379.0) Encodes protein phosphatase 2C. Negative regulator of ABA signalling. Expressed in seeds during germination. mRNA up-regulated by drought and ABA.; protein phosphatase 2CA (PP2CA); FUNCTIONS IN: protein binding, protein serine/threonine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 6 processes; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 2 (TAIR:AT1G07430.1); Has 6894 Blast hits to 6854 proteins in 510 species: Archae - 4; Bacteria - 413; Metazoa - 1689; Fungi - 773; Plants - 2747; Viruses - 7; Other Eukaryotes - 1261 (source: NCBI BLink). & (gnl|cdd|35917 : 240.0) no description available & (gnl|cdd|47660 : 238.0) no description available & (reliability: 758.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf00807_317644-324632' '(at4g38470 : 647.0) ACT-like protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Amino acid-binding ACT (InterPro:IPR002912), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: ACT-like protein tyrosine kinase family protein (TAIR:AT4G35780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 298.0) no description available & (gnl|cdd|47549 : 247.0) no description available & (q8lkz1|nork_pea : 123.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 1294.0) & (original description: Putative ACTK, Description = Serine/threonine-protein kinase HT1, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf00807_317647-324564' '(at4g38470 : 657.0) ACT-like protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Amino acid-binding ACT (InterPro:IPR002912), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: ACT-like protein tyrosine kinase family protein (TAIR:AT4G35780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 299.0) no description available & (gnl|cdd|47549 : 247.0) no description available & (q8lkz1|nork_pea : 122.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 1314.0) & (original description: Putative ACTK, Description = Serine/threonine-protein kinase HT1, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf00851_358959-377812' '(at2g27210 : 1542.0) BRI1 suppressor 1 (BSU1)-like 3 (BSL3); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, iron ion binding, phosphoprotein phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Metallophosphoesterase (InterPro:IPR004843), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 2 (TAIR:AT1G08420.2). & (q2qm47|bsl2_orysa : 1478.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35595 : 371.0) no description available & (gnl|cdd|47495 : 312.0) no description available & (reliability: 3044.0) & (original description: Putative bimG, Description = Serine/threonine-protein phosphatase, PFAM = PF07646;PF13418;PF13418;PF00149)' T '29.4' 'protein.postranslational modification' 'niben101scf00860_456862-461920' '(q9sec2|msra_lacsa : 354.0) Peptide methionine sulfoxide reductase (EC 1.8.4.11) (Protein-methionine-S-oxide reductase) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase) - Lactuca sativa (Garden lettuce) & (at4g25130 : 325.0) Encodes a chloroplast-localized methionine sulfoxide reductase that is a member of the MSRA family. Involved in protection of chloroplasts from oxidative stress.; peptide met sulfoxide reductase 4 (PMSR4); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: protein modification process, cellular response to oxidative stress; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Peptide methionine sulphoxide reductase MsrA (InterPro:IPR002569); BEST Arabidopsis thaliana protein match is: peptidemethionine sulfoxide reductase 1 (TAIR:AT5G61640.1); Has 10332 Blast hits to 10330 proteins in 2437 species: Archae - 129; Bacteria - 6211; Metazoa - 196; Fungi - 136; Plants - 235; Viruses - 1; Other Eukaryotes - 3424 (source: NCBI BLink). & (gnl|cdd|36848 : 298.0) no description available & (gnl|cdd|80482 : 229.0) no description available & (reliability: 650.0) & (original description: Putative MSRA1, Description = Peptide methionine sulfoxide reductase A1, PFAM = PF01625)' T '29.4' 'protein.postranslational modification' 'niben101scf00863_495028-500121' '(at3g60340 : 328.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: palmitoyl-(protein) hydrolase activity; INVOLVED IN: protein modification process; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Palmitoyl protein thioesterase (InterPro:IPR002472); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G47330.1); Has 611 Blast hits to 607 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 315; Fungi - 98; Plants - 140; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|37752 : 323.0) no description available & (gnl|cdd|65841 : 129.0) no description available & (reliability: 608.0) & (original description: Putative PPTE, Description = Palmitoyl protein thioesterase family protein, PFAM = PF02089)' T '29.4' 'protein.postranslational modification' 'niben101scf00873_284428-293104' '(at1g53050 : 704.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G09600.1); Has 124596 Blast hits to 123234 proteins in 4130 species: Archae - 92; Bacteria - 13981; Metazoa - 46101; Fungi - 12764; Plants - 31065; Viruses - 453; Other Eukaryotes - 20140 (source: NCBI BLink). & (gnl|cdd|35820 : 648.0) no description available & (gnl|cdd|29142 : 255.0) no description available & (p24923|cdc21_medsa : 223.0) Cell division control protein 2 homolog 1 (EC 2.7.11.22) (EC 2.7.11.23) (Fragment) - Medicago sativa (Alfalfa) & (reliability: 1408.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00875_795522-798091' '(at2g28060 : 102.0) 5'-AMP-activated protein kinase beta-2 subunit protein; CONTAINS InterPro DOMAIN/s: 5-AMP-activated protein kinase, beta subunit, interaction domain (InterPro:IPR006828); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase beta-2 subunit protein (TAIR:AT5G21170.2); Has 379 Blast hits to 379 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 199; Fungi - 21; Plants - 141; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative OSKbeta3, Description = Beta subunit 3 of SnRK1, PFAM = PF04739)' T '29.4' 'protein.postranslational modification' 'niben101scf00879_1044069-1050031' '(at1g03590 : 629.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G03415.2); Has 5799 Blast hits to 5797 proteins in 294 species: Archae - 0; Bacteria - 4; Metazoa - 1418; Fungi - 691; Plants - 2505; Viruses - 5; Other Eukaryotes - 1176 (source: NCBI BLink). & (gnl|cdd|35917 : 207.0) no description available & (gnl|cdd|29062 : 184.0) no description available & (reliability: 1258.0) & (original description: Putative At4g03415, Description = Probable protein phosphatase 2C 52, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf00914_497594-507016' '(at2g18390 : 283.0) Encodes a member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. Mutant has abnormal mitosis and cell cycle control during seed development.; TITAN 5 (TTN5); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: in 6 processes; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor A1B (TAIR:AT5G14670.1); Has 10006 Blast hits to 10000 proteins in 420 species: Archae - 13; Bacteria - 39; Metazoa - 4544; Fungi - 1627; Plants - 1505; Viruses - 3; Other Eukaryotes - 2275 (source: NCBI BLink). & (gnl|cdd|58037 : 282.0) no description available & (gnl|cdd|35296 : 272.0) no description available & (q06396|arf1_orysa : 142.0) ADP-ribosylation factor 1 (13 kDa cold-induced protein) - Oryza sativa (Rice) & (reliability: 566.0) & (original description: Putative ARL2, Description = ADP-ribosylation factor-like protein 2, PFAM = PF00025)' T '29.4' 'protein.postranslational modification' 'niben101scf00927_1378571-1383689' '(at1g11330 : 776.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-1 13 (TAIR:AT1G11350.1). & (gnl|cdd|36401 : 320.0) no description available & (p17801|kpro_maize : 273.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 174.0) no description available & (reliability: 1552.0) & (original description: Putative At1g11330, Description = G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330, PFAM = PF01453;PF08276;PF00954;PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf00928_23986-46967' '(at3g06030 : 649.0) NPK1-related protein kinase 3; NPK1-related protein kinase 3 (NP3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: cortical microtubule organization; LOCATED IN: apoplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Mitogen activated protein kinase kinase kinase 3 (InterPro:IPR015748), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NPK1-related protein kinase 1 (TAIR:AT1G09000.1); Has 135037 Blast hits to 132652 proteins in 4867 species: Archae - 156; Bacteria - 15291; Metazoa - 50641; Fungi - 13369; Plants - 33230; Viruses - 554; Other Eukaryotes - 21796 (source: NCBI BLink). & (gnl|cdd|35419 : 313.0) no description available & (gnl|cdd|29142 : 282.0) no description available & (q5qn75|m2k1_orysa : 117.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1298.0) & (original description: Putative NPK1, Description = Mitogen-activated protein kinase kinase kinase NPK1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00944_675735-684418' '(at4g14340 : 650.0) Phosphorylates serine or threonine residues that are near and C-terminal to acidic side chains on a variety of target proteins; casein kinase I (CKI1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase I-like 10 (TAIR:AT3G23340.1); Has 58467 Blast hits to 58136 proteins in 2224 species: Archae - 39; Bacteria - 9706; Metazoa - 21949; Fungi - 6340; Plants - 9653; Viruses - 309; Other Eukaryotes - 10471 (source: NCBI BLink). & (gnl|cdd|36378 : 486.0) no description available & (gnl|cdd|29142 : 163.0) no description available & (reliability: 1300.0) & (original description: Putative ckl5, Description = Casein kinase I-like protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00982_255528-258952' '(at5g10930 : 510.0) Encodes CBL-interacting protein kinase 5 (CIPK5).; CBL-interacting protein kinase 5 (CIPK5); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 25 (TAIR:AT5G25110.1); Has 132030 Blast hits to 129710 proteins in 4599 species: Archae - 195; Bacteria - 15419; Metazoa - 48583; Fungi - 13177; Plants - 32322; Viruses - 524; Other Eukaryotes - 21810 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 377.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 345.0) no description available & (gnl|cdd|29142 : 293.0) no description available & (reliability: 1020.0) & (original description: Putative PGSC0003DMG400019375, Description = Non-specific serine/threonine protein kinase, PFAM = PF00069;PF03822)' T '29.4' 'protein.postranslational modification' 'niben101scf00987_69537-77180' '(at4g14340 : 696.0) Phosphorylates serine or threonine residues that are near and C-terminal to acidic side chains on a variety of target proteins; casein kinase I (CKI1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase I-like 10 (TAIR:AT3G23340.1); Has 58467 Blast hits to 58136 proteins in 2224 species: Archae - 39; Bacteria - 9706; Metazoa - 21949; Fungi - 6340; Plants - 9653; Viruses - 309; Other Eukaryotes - 10471 (source: NCBI BLink). & (gnl|cdd|36378 : 485.0) no description available & (gnl|cdd|29142 : 162.0) no description available & (reliability: 1392.0) & (original description: Putative CKL6, Description = Casein kinase 1-like protein 6, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf00987_268690-273661' '(at3g23360 : 197.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: fruit; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G15260.2); Has 1649 Blast hits to 1645 proteins in 226 species: Archae - 0; Bacteria - 36; Metazoa - 401; Fungi - 135; Plants - 907; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|29062 : 107.0) no description available & (gnl|cdd|35917 : 106.0) no description available & (reliability: 394.0) & (original description: Putative At3g23360, Description = Putative protein phosphatase 2C-like protein 44, PFAM = PF00481;PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf01022_284472-295221' '(at5g49470 : 837.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT1G67890.1). & (gnl|cdd|35413 : 332.0) no description available & (gnl|cdd|87344 : 258.0) no description available & (q8l4h4|nork_medtr : 120.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1674.0) & (original description: Putative At5g49470, Description = PAS domain-containing protein tyrosine kinase, PFAM = PF00989;PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf01022_326128-382418' '(at5g49470 : 798.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT1G67890.1). & (gnl|cdd|35413 : 332.0) no description available & (gnl|cdd|87344 : 258.0) no description available & (q8l4h4|nork_medtr : 116.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1596.0) & (original description: Putative CTR1, Description = Serine/threonine-protein kinase CTR1, PFAM = PF13426;PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf01025_721623-728601' '(at2g37550 : 383.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ARF-GAP domain 7 (AGD7); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 6 (TAIR:AT3G53710.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35923 : 271.0) no description available & (gnl|cdd|85433 : 139.0) no description available & (reliability: 766.0) & (original description: Putative BnaC04g27040D, Description = BnaC04g27040D protein, PFAM = PF01412)' T '29.4' 'protein.postranslational modification' 'niben101scf01032_286498-299401' '(at5g09890 : 813.0) Protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT4G14350.2); Has 109819 Blast hits to 108536 proteins in 3259 species: Archae - 120; Bacteria - 13353; Metazoa - 38509; Fungi - 11858; Plants - 26725; Viruses - 411; Other Eukaryotes - 18843 (source: NCBI BLink). & (gnl|cdd|35825 : 663.0) no description available & (gnl|cdd|47550 : 277.0) no description available & (p47997|g11a_orysa : 163.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 1626.0) & (original description: Putative STK38L, Description = Serine/threonine-protein kinase 38-like, PFAM = PF00069;PF00433)' T '29.4' 'protein.postranslational modification' 'niben101scf01037_186793-194857' '(at4g15415 : 721.0) B' regulatory subunit of PP2A (AtB'gamma); ATB' GAMMA; FUNCTIONS IN: poly(U) RNA binding, protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: protein phosphatase type 2A complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT3G21650.1); Has 1169 Blast hits to 1162 proteins in 197 species: Archae - 0; Bacteria - 4; Metazoa - 568; Fungi - 149; Plants - 302; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink). & (gnl|cdd|85563 : 713.0) no description available & (gnl|cdd|37296 : 646.0) no description available & (reliability: 1442.0) & (original description: Putative B'GAMMA, Description = Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform, PFAM = PF01603)' T '29.4' 'protein.postranslational modification' 'niben101scf01068_157459-170195' '(at3g58640 : 1129.0) Mitogen activated protein kinase kinase kinase-related; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G31010.2); Has 125614 Blast hits to 123525 proteins in 4988 species: Archae - 158; Bacteria - 13731; Metazoa - 47851; Fungi - 11388; Plants - 32996; Viruses - 518; Other Eukaryotes - 18972 (source: NCBI BLink). & (gnl|cdd|35413 : 283.0) no description available & (gnl|cdd|87344 : 230.0) no description available & (q8lkz1|nork_pea : 104.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 2258.0) & (original description: Putative BnaC06g16750D, Description = BnaC06g16750D protein, PFAM = PF07714;PF14381)' T '29.4' 'protein.postranslational modification' 'niben101scf01070_555115-568268' '(at4g38470 : 483.0) ACT-like protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Amino acid-binding ACT (InterPro:IPR002912), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: ACT-like protein tyrosine kinase family protein (TAIR:AT4G35780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 290.0) no description available & (gnl|cdd|87344 : 271.0) no description available & (q8l4h4|nork_medtr : 113.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 966.0) & (original description: Putative si945024a11, Description = ATP binding protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf01072_66877-74039' '(q75v63|sapk3_orysa : 516.0) Serine/threonine-protein kinase SAPK3 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 3) (Protein kinase REK) - Oryza sativa (Rice) & (at4g33950 : 487.0) Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network.; OPEN STOMATA 1 (OST1); FUNCTIONS IN: calcium-dependent protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 (TAIR:AT5G66880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35803 : 305.0) no description available & (gnl|cdd|47550 : 271.0) no description available & (reliability: 974.0) & (original description: Putative SAPK3, Description = Serine/threonine-protein kinase SAPK3, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01072_69817-437292' '(q84tc6|sapk2_orysa : 211.0) Serine/threonine-protein kinase SAPK2 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 2) - Oryza sativa (Rice) & (at1g78290 : 209.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to karrikin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G33950.1); Has 112604 Blast hits to 110873 proteins in 3029 species: Archae - 114; Bacteria - 13128; Metazoa - 41421; Fungi - 12195; Plants - 25871; Viruses - 459; Other Eukaryotes - 19416 (source: NCBI BLink). & (gnl|cdd|35803 : 134.0) no description available & (gnl|cdd|29142 : 131.0) no description available & (reliability: 418.0) & (original description: Putative pk5, Description = Serine/threonine-protein kinase SAPK7, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01085_609306-613731' '(at5g58320 : 230.0) Kinase interacting (KIP1-like) family protein; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT2G30500.2); Has 42357 Blast hits to 25393 proteins in 1812 species: Archae - 756; Bacteria - 4857; Metazoa - 21184; Fungi - 4124; Plants - 2465; Viruses - 154; Other Eukaryotes - 8817 (source: NCBI BLink). & (gnl|cdd|71206 : 130.0) no description available & (reliability: 460.0) & (original description: Putative NET4A, Description = Protein NETWORKED 4A, PFAM = PF07765)' T '29.4' 'protein.postranslational modification' 'niben101scf01091_77593-90449' '(q04903|pftb_pea : 539.0) Protein farnesyltransferase subunit beta (EC 2.5.1.58) (CAAX farnesyltransferase subunit beta) (RAS proteins prenyltransferase beta) (FTase-beta) - Pisum sativum (Garden pea) & (at5g40280 : 516.0) encodes a beta subunit of farnesyl-trans-transferase, which is involved in meristem organization and ABA-mediated signal transduction pathway. Mutant phenotypes have been observed in meristem organization, and response to abscisic acid and drought.; ENHANCED RESPONSE TO ABA 1 (ERA1); CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase beta subunit 2 (TAIR:AT3G12070.2); Has 2257 Blast hits to 1610 proteins in 263 species: Archae - 4; Bacteria - 30; Metazoa - 707; Fungi - 630; Plants - 303; Viruses - 4; Other Eukaryotes - 579 (source: NCBI BLink). & (gnl|cdd|35586 : 468.0) no description available & (gnl|cdd|29792 : 429.0) no description available & (reliability: 1032.0) & (original description: Putative FTB, Description = Protein farnesyltransferase subunit beta, PFAM = PF00432;PF00432;PF00432;PF00432;PF00432)' T '29.4' 'protein.postranslational modification' 'niben101scf01125_216664-222970' '(at1g31160 : 204.0) Encodes a member of the histidine triad nucleotide-binding family of proteins, but its activity has not been determined.; HISTIDINE TRIAD NUCLEOTIDE-BINDING 2 (HINT 2); FUNCTIONS IN: protein kinase C binding, zinc ion binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808), Histidine triad (HIT) protein (InterPro:IPR001310), Histidine triad motif (InterPro:IPR011151); BEST Arabidopsis thaliana protein match is: HIS triad family protein 3 (TAIR:AT3G56490.1); Has 8225 Blast hits to 8223 proteins in 2654 species: Archae - 159; Bacteria - 5014; Metazoa - 405; Fungi - 167; Plants - 130; Viruses - 0; Other Eukaryotes - 2350 (source: NCBI BLink). & (p42856|zb14_maize : 187.0) 14 kDa zinc-binding protein (Protein kinase C inhibitor) (PKCI) - Zea mays (Maize) & (gnl|cdd|38485 : 168.0) no description available & (gnl|cdd|29589 : 143.0) no description available & (reliability: 408.0) & (original description: Putative ZBP14, Description = 14 kDa zinc-binding protein, PFAM = PF01230)' T '29.4' 'protein.postranslational modification' 'niben101scf01145_207113-212740' '(at4g19110 : 602.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G45430.2); Has 112836 Blast hits to 111739 proteins in 3697 species: Archae - 107; Bacteria - 12214; Metazoa - 43480; Fungi - 11684; Plants - 25102; Viruses - 509; Other Eukaryotes - 19740 (source: NCBI BLink). & (gnl|cdd|35880 : 466.0) no description available & (gnl|cdd|29142 : 274.0) no description available & (p29619|cdc22_orysa : 218.0) Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Oryza sativa (Rice) & (reliability: 1204.0) & (original description: Putative crk2, Description = Serine/threonine-protein kinase MAK, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01156_152356-159229' '(at4g33920 : 539.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: mitochondrion, protein serine/threonine phosphatase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G51370.1); Has 5306 Blast hits to 5302 proteins in 304 species: Archae - 0; Bacteria - 42; Metazoa - 1364; Fungi - 564; Plants - 2405; Viruses - 3; Other Eukaryotes - 928 (source: NCBI BLink). & (gnl|cdd|35919 : 338.0) no description available & (gnl|cdd|29062 : 177.0) no description available & (reliability: 1078.0) & (original description: Putative pp2C2, Description = Serine/threonine phosphatase family, 2C domain protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf01175_720788-728520' '(at1g53050 : 925.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G09600.1); Has 124596 Blast hits to 123234 proteins in 4130 species: Archae - 92; Bacteria - 13981; Metazoa - 46101; Fungi - 12764; Plants - 31065; Viruses - 453; Other Eukaryotes - 20140 (source: NCBI BLink). & (gnl|cdd|35820 : 667.0) no description available & (gnl|cdd|29142 : 262.0) no description available & (q05006|cdc22_medsa : 219.0) Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Medicago sativa (Alfalfa) & (reliability: 1850.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01181_61995-66118' '(p93340|gblp_nicpl : 582.0) Guanine nucleotide-binding protein subunit beta-like protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g18130 : 523.0) Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1C has no phenotype on its own and probably acts redundantly with RACK1A and RACK1B.; receptor for activated C kinase 1C (RACK1C_AT); FUNCTIONS IN: nucleotide binding; INVOLVED IN: shoot development, root development; LOCATED IN: nucleolus, heterotrimeric G-protein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B (TAIR:AT1G48630.1); Has 88582 Blast hits to 37057 proteins in 965 species: Archae - 74; Bacteria - 10338; Metazoa - 34853; Fungi - 20136; Plants - 11319; Viruses - 6; Other Eukaryotes - 11856 (source: NCBI BLink). & (gnl|cdd|35500 : 447.0) no description available & (gnl|cdd|29257 : 232.0) no description available & (reliability: 1046.0) & (original description: Putative ARCA, Description = Guanine nucleotide-binding protein subunit beta-like protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '29.4' 'protein.postranslational modification' 'niben101scf01181_323869-340158' '(at1g73660 : 527.0) Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance.; protein tyrosine kinase family protein; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Ubiquitin interacting motif (InterPro:IPR003903), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18160.1); Has 126827 Blast hits to 124278 proteins in 4857 species: Archae - 98; Bacteria - 13376; Metazoa - 48156; Fungi - 11388; Plants - 33654; Viruses - 503; Other Eukaryotes - 19652 (source: NCBI BLink). & (gnl|cdd|35413 : 327.0) no description available & (gnl|cdd|87344 : 251.0) no description available & (q8lpb4|pskr_dauca : 101.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1054.0) & (original description: Putative MAPK, Description = Mitogen-activated protein kinase, PFAM = PF07714;PF14381)' T '29.4' 'protein.postranslational modification' 'niben101scf01181_336754-339539' '(at1g73660 : 176.0) Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance.; protein tyrosine kinase family protein; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Ubiquitin interacting motif (InterPro:IPR003903), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18160.1); Has 126827 Blast hits to 124278 proteins in 4857 species: Archae - 98; Bacteria - 13376; Metazoa - 48156; Fungi - 11388; Plants - 33654; Viruses - 503; Other Eukaryotes - 19652 (source: NCBI BLink). & (gnl|cdd|35413 : 126.0) no description available & (gnl|cdd|87344 : 97.9) no description available & (reliability: 352.0) & (original description: Putative Sb04g007765, Description = Putative uncharacterized protein Sb04g007765, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf01188_1035653-1045269' '(at2g44680 : 400.0) Encodes casein kinase II beta chain, a CK2 regulatory subunit. Nuclear-localized CKB4 protein exists in vivo as different isoforms, resulting from phosphorylation on serine residues. The phosphorylated isoforms are the preferred substrate for ubiquitination and degradation by the proteasome pathway. Involved in regulation of circadian clock.; casein kinase II beta subunit 4 (CKB4); CONTAINS InterPro DOMAIN/s: Casein kinase II, regulatory subunit, alpha-helical (InterPro:IPR016149), Casein kinase II, regulatory subunit, beta-sheet (InterPro:IPR016150), Casein kinase II, regulatory subunit (InterPro:IPR000704); BEST Arabidopsis thaliana protein match is: casein kinase II beta chain 3 (TAIR:AT3G60250.2); Has 1093 Blast hits to 1091 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 429; Fungi - 285; Plants - 156; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (gnl|cdd|38302 : 356.0) no description available & (gnl|cdd|65042 : 305.0) no description available & (reliability: 800.0) & (original description: Putative ck2b, Description = CK II beta, PFAM = PF01214)' T '29.4' 'protein.postranslational modification' 'niben101scf01191_165680-174966' '(at1g09000 : 593.0) NPK1-related protein kinase 1S; NPK1-related protein kinase 1 (NP1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Mitogen activated protein kinase kinase kinase 3 (InterPro:IPR015748), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: NPK1-related protein kinase 2 (TAIR:AT1G54960.1); Has 134800 Blast hits to 132536 proteins in 4716 species: Archae - 154; Bacteria - 14967; Metazoa - 50642; Fungi - 13331; Plants - 33399; Viruses - 553; Other Eukaryotes - 21754 (source: NCBI BLink). & (gnl|cdd|35419 : 320.0) no description available & (gnl|cdd|47550 : 292.0) no description available & (q6x4a2|cipk1_orysa : 122.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1186.0) & (original description: Putative ANP1, Description = Mitogen-activated protein kinase kinase kinase ANP1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01209_268082-272798' '(at5g35370 : 764.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-2 5 (TAIR:AT4G32300.1); Has 120687 Blast hits to 119102 proteins in 4782 species: Archae - 112; Bacteria - 13256; Metazoa - 44443; Fungi - 10300; Plants - 34517; Viruses - 382; Other Eukaryotes - 17677 (source: NCBI BLink). & (gnl|cdd|36401 : 310.0) no description available & (p17801|kpro_maize : 279.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 173.0) no description available & (reliability: 1528.0) & (original description: Putative At5g35370, Description = Serine/threonine-protein kinase, PFAM = PF00069;PF01453)' T '29.4' 'protein.postranslational modification' 'niben101scf01222_286199-295053' '(at1g73670 : 617.0) member of MAP Kinase; MAP kinase 15 (MPK15); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18150.3); Has 118424 Blast hits to 117259 proteins in 3821 species: Archae - 110; Bacteria - 13457; Metazoa - 43793; Fungi - 12258; Plants - 28693; Viruses - 571; Other Eukaryotes - 19542 (source: NCBI BLink). & (q5z9j0|mpk12_orysa : 605.0) Mitogen-activated protein kinase 12 (EC 2.7.11.24) (MAP kinase 12) (OsBWMK1) (Blast- and wound-induced MAP kinase 1) (MAP kinase 1) (OsMAPK1) - Oryza sativa (Rice) & (gnl|cdd|35879 : 449.0) no description available & (gnl|cdd|29142 : 253.0) no description available & (reliability: 1190.0) & (original description: Putative MPK9, Description = Mitogen-activated protein kinase 9, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01230_124727-138217' '(at1g10630 : 363.0) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.; ADP-ribosylation factor A1F (ARFA1F); FUNCTIONS IN: phospholipase activator activity, GTP binding, copper ion binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT2G47170.1); Has 15022 Blast hits to 15003 proteins in 509 species: Archae - 14; Bacteria - 51; Metazoa - 7710; Fungi - 1942; Plants - 2027; Viruses - 3; Other Eukaryotes - 3275 (source: NCBI BLink). & (p51823|arf2_orysa : 362.0) ADP-ribosylation factor 2 - Oryza sativa (Rice) & (gnl|cdd|47508 : 333.0) no description available & (gnl|cdd|35293 : 318.0) no description available & (reliability: 726.0) & (original description: Putative ARF, Description = ADP-ribosylation factor 2, PFAM = PF00025)' T '29.4' 'protein.postranslational modification' 'niben101scf01235_131666-136230' '(at2g25880 : 526.0) Encodes a member of a family of Ser/Thr kinases whose activities peak during cell division. Transcripts are abundant in tissues rich in dividing cells like roots and flowers but are low or absent in fully expanded leaves and stems. In interphase cells, the protein is predominantly nuclear. During mitosis, the protein associates with plant-specific cytoskeletal structures (preprophase band, phragmoplast, nascent cell plate) that are necessary for cytokinesis as well as with the microtubule spindle.; ataurora2 (AUR2); CONTAINS InterPro DOMAIN/s: Spindle assembly checkpoint kinase (InterPro:IPR020663), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ataurora1 (TAIR:AT4G32830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35800 : 430.0) no description available & (gnl|cdd|29142 : 280.0) no description available & (q6x4a2|cipk1_orysa : 173.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1050.0) & (original description: Putative AUR1, Description = Serine/threonine-protein kinase Aurora-1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01236_12059-20848' '(at3g17510 : 575.0) Encodes a CBL-interacting protein kinase. Specifically interacts with ECT1 and ECT2.; CBL-interacting protein kinase 1 (CIPK1); CONTAINS InterPro DOMAIN/s: NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 17 (TAIR:AT1G48260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 442.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 344.0) no description available & (gnl|cdd|29142 : 287.0) no description available & (reliability: 1150.0) & (original description: Putative CIPK17, Description = CBL-interacting serine/threonine-protein kinase 17, PFAM = PF00069;PF02149;PF03822)' T '29.4' 'protein.postranslational modification' 'niben101scf01236_513015-517321' '(at3g62290 : 365.0) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.; ADP-ribosylation factor A1E (ARFA1E); CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), Ras small GTPase, Rab type (InterPro:IPR003579), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT2G47170.1). & (p51823|arf2_orysa : 358.0) ADP-ribosylation factor 2 - Oryza sativa (Rice) & (gnl|cdd|47508 : 333.0) no description available & (gnl|cdd|35293 : 315.0) no description available & (reliability: 730.0) & (original description: Putative ARF1, Description = ADP-ribosylation factor 1, PFAM = PF00025)' T '29.4' 'protein.postranslational modification' 'niben101scf01237_79640-83583' '(at1g07160 : 357.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: chloroplast, protein serine/threonine phosphatase complex; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G30020.1); Has 7376 Blast hits to 7203 proteins in 674 species: Archae - 10; Bacteria - 746; Metazoa - 1767; Fungi - 814; Plants - 2696; Viruses - 11; Other Eukaryotes - 1332 (source: NCBI BLink). & (gnl|cdd|35917 : 240.0) no description available & (gnl|cdd|29062 : 234.0) no description available & (reliability: 714.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf01237_1284771-1288108' '(at5g58380 : 576.0) Encodes a CBL-interacting protein kinase with similarity to SOS protein kinase.; SOS3-interacting protein 1 (SIP1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 2 (TAIR:AT5G07070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 436.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 337.0) no description available & (gnl|cdd|29142 : 281.0) no description available & (reliability: 1152.0) & (original description: Putative CIPK2, Description = CBL-interacting protein kinase 2, PFAM = PF00069;PF03822)' T '29.4' 'protein.postranslational modification' 'niben101scf01238_6-9802' '(at5g46570 : 822.0) Encodes BR-signaling kinase 2 (BSK2), one of the three homologous BR-signaling kinases (BSK1, AT4G35230; BSK2, AT5G46570; BSK3, AT4G00710). Mediates signal transduction from receptor kinase BRI1 by functioning as the substrate of BRI1. Plasma membrane localized.; BR-signaling kinase 2 (BSK2); FUNCTIONS IN: binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: brassinosteroid mediated signaling pathway, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G59010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 218.0) no description available & (p17801|kpro_maize : 119.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 111.0) no description available & (reliability: 1644.0) & (original description: Putative BSK2, Description = At5g46570, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf01290_172398-175642' '(at2g30360 : 496.0) Encodes a SOS2-like protein kinase that is a member of the CBL-interacting protein kinase family.Loss of function mutants show a decrease in sensitivity to high pH.Phosphorylates AHA2, a plasma membrane H+ ATPase.This phosphorylation appears to regulate the activity of the proton transporter.; SOS3-interacting protein 4 (SIP4); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: serine/threonine protein kinase 1 (TAIR:AT5G01820.1); Has 132389 Blast hits to 130226 proteins in 4650 species: Archae - 184; Bacteria - 15582; Metazoa - 48520; Fungi - 13393; Plants - 32054; Viruses - 541; Other Eukaryotes - 22115 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 340.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 331.0) no description available & (gnl|cdd|29142 : 298.0) no description available & (reliability: 992.0) & (original description: Putative wpk4, Description = Non-specific serine/threonine protein kinase, PFAM = PF00069;PF03822)' T '29.4' 'protein.postranslational modification' 'niben101scf01304_586008-610356' '(at1g17720 : 831.0) type 2A protein serine/threonine phosphatase 55 kDa B; ATB BETA; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Protein phosphatase 2A, regulatory subunit PR55 (InterPro:IPR000009), Protein phosphatase 2A, regulatory subunit PR55, conserved site (InterPro:IPR018067), WD40 repeat, conserved site (InterPro:IPR019775), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform (TAIR:AT1G51690.3); Has 1042 Blast hits to 998 proteins in 278 species: Archae - 0; Bacteria - 71; Metazoa - 509; Fungi - 214; Plants - 122; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (q6z8b7|2abb_orysa : 800.0) Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform (PP2A, subunit B, beta isoform) - Oryza sativa (Rice) & (gnl|cdd|36568 : 624.0) no description available & (gnl|cdd|34770 : 450.0) no description available & (reliability: 1662.0) & (original description: Putative PP2AB2, Description = Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform, PFAM = PF00400)' T '29.4' 'protein.postranslational modification' 'niben101scf01322_450630-468863' '(at5g19680 : 406.0) Leucine-rich repeat (LRR) family protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G22320.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39396 : 98.9) no description available & (reliability: 812.0) & (original description: Putative pprA, Description = Protein phosphatase 1 regulatory subunit pprA, PFAM = PF12799;PF12799;PF13855)' T '29.4' 'protein.postranslational modification' 'niben101scf01326_1221466-1225790' '(at5g40030 : 710.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: shoot apex, embryo, root, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 2 (TAIR:AT5G47750.1); Has 111692 Blast hits to 81240 proteins in 2732 species: Archae - 30; Bacteria - 14475; Metazoa - 44429; Fungi - 12685; Plants - 18495; Viruses - 325; Other Eukaryotes - 21253 (source: NCBI BLink). & (gnl|cdd|35830 : 628.0) no description available & (p47997|g11a_orysa : 589.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 158.0) no description available & (reliability: 1420.0) & (original description: Putative RHS3, Description = Serine/threonine-protein kinase RHS3, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01334_397212-405327' '(at3g17510 : 575.0) Encodes a CBL-interacting protein kinase. Specifically interacts with ECT1 and ECT2.; CBL-interacting protein kinase 1 (CIPK1); CONTAINS InterPro DOMAIN/s: NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 17 (TAIR:AT1G48260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 431.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 337.0) no description available & (gnl|cdd|29142 : 293.0) no description available & (reliability: 1150.0) & (original description: Putative CIPK1, Description = CBL-interacting serine/threonine-protein kinase 1, PFAM = PF03822;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01339_442022-453257' '(o24304|pfta_pea : 407.0) Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit (EC 2.5.1.58) (EC 2.5.1.59) (CAAX farnesyltransferase alpha subunit) (Ras proteins prenyltransferase alpha) (FTase-alpha) (Type I protein geranyl-geranyltransferas & (at3g59380 : 376.0) Encodes the alpha-subunit shared between protein farnesyltransferase and protein geranylgeranyltransferase-I. Involved in protein prenylation: covalent attachment of the C-15 isoprene farnesyl or the C-20 isoprene geranylgeranyl groups to the C-terminal end of some proteins. Involved in shoot and flower meristem homeostasis, and response to ABA and drought. Also regulates leaf cell shape. Mutant is epistatic to era1.; farnesyltransferase A (FTA); CONTAINS InterPro DOMAIN/s: Protein prenyltransferase (InterPro:IPR008940), Protein prenyltransferase, alpha subunit (InterPro:IPR002088); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase alpha subunit 1 (TAIR:AT4G24490.2); Has 1351 Blast hits to 1070 proteins in 249 species: Archae - 32; Bacteria - 58; Metazoa - 584; Fungi - 296; Plants - 191; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (gnl|cdd|35750 : 342.0) no description available & (gnl|cdd|35095 : 160.0) no description available & (reliability: 752.0) & (original description: Putative FTA, Description = Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, PFAM = PF01239;PF01239;PF01239;PF01239)' T '29.4' 'protein.postranslational modification' 'niben101scf01349_326615-345535' '(at1g49180 : 318.0) protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, nucleic acid binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase, putative (InterPro:IPR020655), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G37840.1). & (gnl|cdd|35815 : 292.0) no description available & (gnl|cdd|29142 : 272.0) no description available & (p28582|cdpk_dauca : 148.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 584.0) & (original description: Putative ATG1c, Description = Serine/threonine-protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01367_86274-111897' '(at3g58640 : 1004.0) Mitogen activated protein kinase kinase kinase-related; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G31010.2); Has 125614 Blast hits to 123525 proteins in 4988 species: Archae - 158; Bacteria - 13731; Metazoa - 47851; Fungi - 11388; Plants - 32996; Viruses - 518; Other Eukaryotes - 18972 (source: NCBI BLink). & (gnl|cdd|35413 : 280.0) no description available & (gnl|cdd|87344 : 231.0) no description available & (q8l4h4|nork_medtr : 108.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 2008.0) & (original description: Putative CTR1, Description = Serine/threonine-protein kinase CTR1, PFAM = PF07714;PF14381)' T '29.4' 'protein.postranslational modification' 'niben101scf01367_91469-97357' '(at3g58640 : 103.0) Mitogen activated protein kinase kinase kinase-related; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G31010.2); Has 125614 Blast hits to 123525 proteins in 4988 species: Archae - 158; Bacteria - 13731; Metazoa - 47851; Fungi - 11388; Plants - 32996; Viruses - 518; Other Eukaryotes - 18972 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative BnaC04g41700D, Description = MAP kinase kinase kinase-like protein, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben101scf01370_318740-324913' '(at1g34750 : 407.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: phytochrome-associated protein phosphatase type 2C (TAIR:AT1G22280.1); Has 7616 Blast hits to 7609 proteins in 922 species: Archae - 14; Bacteria - 1457; Metazoa - 1483; Fungi - 777; Plants - 2623; Viruses - 11; Other Eukaryotes - 1251 (source: NCBI BLink). & (gnl|cdd|35917 : 246.0) no description available & (gnl|cdd|29062 : 227.0) no description available & (reliability: 814.0) & (original description: Putative At1g34750, Description = Probable protein phosphatase 2C 10, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf01388_55509-66267' '(at4g02390 : 758.0) Encodes a DNA dependent nuclear poly (ADP-ribose) polymerase (E.C.2.4.2.30), thought to be involved in post-translational modification .; poly(ADP-ribose) polymerase (PP); FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity, nucleic acid binding; INVOLVED IN: protein amino acid ADP-ribosylation; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), WGR (InterPro:IPR008893), Poly(ADP-ribose) polymerase, regulatory domain (InterPro:IPR004102), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317); BEST Arabidopsis thaliana protein match is: poly(ADP-ribose) polymerase 2 (TAIR:AT2G31320.1); Has 1052 Blast hits to 1033 proteins in 170 species: Archae - 0; Bacteria - 15; Metazoa - 556; Fungi - 107; Plants - 166; Viruses - 5; Other Eukaryotes - 203 (source: NCBI BLink). & (o50017|parp2_maize : 757.0) Poly [ADP-ribose] polymerase 2 (EC 2.4.2.30) (PARP-2) (ADPRT 2) (NAD(+) ADP-ribosyltransferase 2) (Poly[ADP-ribose] synthetase 2) - Zea mays (Maize) & (gnl|cdd|30068 : 459.0) no description available & (gnl|cdd|36255 : 348.0) no description available & (reliability: 1516.0) & (original description: Putative PARP2, Description = Poly [ADP-ribose] polymerase 2, PFAM = PF05406;PF02877;PF02037;PF02037;PF00644)' T '29.4' 'protein.postranslational modification' 'niben101scf01409_169310-177333' '(at5g57610 : 927.0) Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT1G16270.2); Has 119780 Blast hits to 118332 proteins in 4796 species: Archae - 124; Bacteria - 12838; Metazoa - 46034; Fungi - 10270; Plants - 32306; Viruses - 451; Other Eukaryotes - 17757 (source: NCBI BLink). & (gnl|cdd|35413 : 297.0) no description available & (gnl|cdd|87344 : 244.0) no description available & (q8lkz1|nork_pea : 95.1) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 1854.0) & (original description: Putative At5g57610, Description = Octicosapeptide/Phox/Bem1p domain-containing protein kinase, PFAM = PF07714;PF00564)' T '29.4' 'protein.postranslational modification' 'niben101scf01409_457789-462168' '(at5g57630 : 422.0) CBL-interacting protein kinase; CBL-interacting protein kinase 21 (CIPK21); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 23 (TAIR:AT1G30270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 335.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 272.0) no description available & (gnl|cdd|29142 : 243.0) no description available & (reliability: 844.0) & (original description: Putative cipk, Description = Non-specific serine/threonine protein kinase, PFAM = PF03822;PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01409_480932-521885' '(at2g24765 : 131.0) GTPase required for Golgi targeting of GRIP domain proteins. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner; ADP-ribosylation factor 3 (ARF3); FUNCTIONS IN: protein binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: Golgi stack, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor A1B (TAIR:AT5G14670.1); Has 9110 Blast hits to 9109 proteins in 393 species: Archae - 2; Bacteria - 4; Metazoa - 4531; Fungi - 1457; Plants - 1456; Viruses - 3; Other Eukaryotes - 1657 (source: NCBI BLink). & (gnl|cdd|58034 : 113.0) no description available & (gnl|cdd|35293 : 91.9) no description available & (q06396|arf1_orysa : 86.3) ADP-ribosylation factor 1 (13 kDa cold-induced protein) - Oryza sativa (Rice) & (reliability: 262.0) & (original description: Putative arf1, Description = ADP-ribosylation factor 1-like 2, PFAM = PF00025)' T '29.4' 'protein.postranslational modification' 'niben101scf01418_213572-216672' '(gnl|cdd|35419 : 224.0) no description available & (at5g67080 : 213.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 19 (MAPKKK19); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, LP.06 six leaves visible, M germinated pollen stage, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 20 (TAIR:AT3G50310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47550 : 205.0) no description available & (p28582|cdpk_dauca : 106.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 426.0) & (original description: Putative MAPKKK20, Description = Mitogen-activated protein kinase kinase kinase 3, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01418_213575-216369' '(gnl|cdd|35419 : 221.0) no description available & (at5g67080 : 212.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 19 (MAPKKK19); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, LP.06 six leaves visible, M germinated pollen stage, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 20 (TAIR:AT3G50310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47550 : 205.0) no description available & (p28582|cdpk_dauca : 106.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 424.0) & (original description: Putative MAPKKK19, Description = Mitogen-activated protein kinase kinase kinase A, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01444_284708-295604' '(at3g53570 : 731.0) a member of a CDC2-related kinase subfamily, the LAMMER kinases. activates STE12-dependent functions in yeast.; FUS3-complementing gene 1 (FC1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: FUS3-complementing gene 2 (TAIR:AT4G24740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35890 : 511.0) no description available & (gnl|cdd|47550 : 201.0) no description available & (p23111|cdc2_maize : 112.0) Cell division control protein 2 homolog (EC 2.7.11.22) (EC 2.7.11.23) (p34cdc2) - Zea mays (Maize) & (reliability: 1462.0) & (original description: Putative AFC1, Description = Serine/threonine-protein kinase AFC1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01450_129010-133883' '(q75lr7|sapk1_orysa : 518.0) Serine/threonine-protein kinase SAPK1 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 1) - Oryza sativa (Rice) & (at1g78290 : 500.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to karrikin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G33950.1); Has 112604 Blast hits to 110873 proteins in 3029 species: Archae - 114; Bacteria - 13128; Metazoa - 41421; Fungi - 12195; Plants - 25871; Viruses - 459; Other Eukaryotes - 19416 (source: NCBI BLink). & (gnl|cdd|35803 : 297.0) no description available & (gnl|cdd|47550 : 267.0) no description available & (reliability: 1000.0) & (original description: Putative SAPK2, Description = Serine/threonine-protein kinase SAPK2, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01450_129346-132387' '(q75lr7|sapk1_orysa : 347.0) Serine/threonine-protein kinase SAPK1 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 1) - Oryza sativa (Rice) & (at1g78290 : 325.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to karrikin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G33950.1); Has 112604 Blast hits to 110873 proteins in 3029 species: Archae - 114; Bacteria - 13128; Metazoa - 41421; Fungi - 12195; Plants - 25871; Viruses - 459; Other Eukaryotes - 19416 (source: NCBI BLink). & (gnl|cdd|35803 : 198.0) no description available & (gnl|cdd|47550 : 169.0) no description available & (reliability: 650.0) & (original description: Putative pk5, Description = Serine/threonine-protein kinase SAPK7, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01477_4451-13752' '(q8lkz1|nork_pea : 891.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (at1g67720 : 365.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G37050.3); Has 172111 Blast hits to 130582 proteins in 4641 species: Archae - 151; Bacteria - 14946; Metazoa - 47791; Fungi - 11011; Plants - 76783; Viruses - 518; Other Eukaryotes - 20911 (source: NCBI BLink). & (gnl|cdd|36401 : 352.0) no description available & (gnl|cdd|87344 : 159.0) no description available & (reliability: 690.0) & (original description: Putative NORK, Description = Nodulation receptor kinase, PFAM = PF12819;PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf01486_226080-239625' '(at4g38470 : 723.0) ACT-like protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Amino acid-binding ACT (InterPro:IPR002912), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: ACT-like protein tyrosine kinase family protein (TAIR:AT4G35780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 316.0) no description available & (gnl|cdd|87344 : 269.0) no description available & (q8l4h4|nork_medtr : 128.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1446.0) & (original description: Putative ACTK, Description = Serine/threonine-protein kinase HT1, PFAM = PF07714;PF01842)' T '29.4' 'protein.postranslational modification' 'niben101scf01486_427822-433487' '(at4g38520 : 595.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35919 : 422.0) no description available & (gnl|cdd|47660 : 181.0) no description available & (reliability: 1190.0) & (original description: Putative pp2C2, Description = Serine/threonine phosphatase family, 2C domain protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf01514_22711-26751' '(at3g02800 : 228.0) Tyrosine phosphatase family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic (InterPro:IPR020428), Protein-tyrosine phosphatase, SIW14-like (InterPro:IPR004861); BEST Arabidopsis thaliana protein match is: Phosphotyrosine protein phosphatases superfamily protein (TAIR:AT5G16480.1); Has 721 Blast hits to 711 proteins in 161 species: Archae - 0; Bacteria - 73; Metazoa - 5; Fungi - 358; Plants - 145; Viruses - 0; Other Eukaryotes - 140 (source: NCBI BLink). & (gnl|cdd|36785 : 200.0) no description available & (gnl|cdd|86260 : 177.0) no description available & (reliability: 448.0) & (original description: Putative At3g02800, Description = Atypical dual-specificity phosphatase, PFAM = PF03162)' T '29.4' 'protein.postranslational modification' 'niben101scf01521_818596-825760' '(at1g27070 : 302.0) 5'-AMP-activated protein kinase-related; BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase-related (TAIR:AT5G03420.1); Has 814 Blast hits to 789 proteins in 227 species: Archae - 3; Bacteria - 97; Metazoa - 231; Fungi - 191; Plants - 199; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|30346 : 92.6) no description available & (reliability: 604.0) & (original description: Putative At1g27070, Description = 5'-AMP-activated protein kinase-like protein, PFAM = PF16561)' T '29.4' 'protein.postranslational modification' 'niben101scf01545_226716-230080' '(at5g10930 : 543.0) Encodes CBL-interacting protein kinase 5 (CIPK5).; CBL-interacting protein kinase 5 (CIPK5); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 25 (TAIR:AT5G25110.1); Has 132030 Blast hits to 129710 proteins in 4599 species: Archae - 195; Bacteria - 15419; Metazoa - 48583; Fungi - 13177; Plants - 32322; Viruses - 524; Other Eukaryotes - 21810 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 374.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 357.0) no description available & (gnl|cdd|29142 : 298.0) no description available & (reliability: 1086.0) & (original description: Putative CIPK5, Description = CBL-interacting serine/threonine-protein kinase 5, PFAM = PF03822;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01557_693277-702753' '(at3g44850 : 732.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G22840.1); Has 38681 Blast hits to 29843 proteins in 1092 species: Archae - 4; Bacteria - 1517; Metazoa - 15700; Fungi - 7143; Plants - 6601; Viruses - 16; Other Eukaryotes - 7700 (source: NCBI BLink). & (gnl|cdd|36504 : 693.0) no description available & (gnl|cdd|47550 : 107.0) no description available & (reliability: 1464.0) & (original description: Putative dsk1, Description = Protein kinase dsk1, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01574_464237-471660' '(at4g33950 : 629.0) Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network.; OPEN STOMATA 1 (OST1); FUNCTIONS IN: calcium-dependent protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 (TAIR:AT5G66880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q75h77|sapka_orysa : 614.0) Serine/threonine-protein kinase SAPK10 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 10) - Oryza sativa (Rice) & (gnl|cdd|35803 : 310.0) no description available & (gnl|cdd|29142 : 267.0) no description available & (reliability: 1168.0) & (original description: Putative SRK2E, Description = Serine/threonine-protein kinase SRK2E, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01577_124878-135730' '(at1g10430 : 637.0) Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].; protein phosphatase 2A-2 (PP2A-2); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A-2 (TAIR:AT1G59830.1); Has 6751 Blast hits to 6569 proteins in 471 species: Archae - 80; Bacteria - 183; Metazoa - 2378; Fungi - 1410; Plants - 970; Viruses - 5; Other Eukaryotes - 1725 (source: NCBI BLink). & (q9zse4|pp2a_hevbr : 631.0) Serine/threonine-protein phosphatase PP2A catalytic subunit (EC 3.1.3.16) - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|35592 : 550.0) no description available & (gnl|cdd|29063 : 375.0) no description available & (reliability: 1274.0) & (original description: Putative PP2A2, Description = Serine/threonine-protein phosphatase PP2A-2 catalytic subunit, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'niben101scf01586_9755-14742' '(at5g25510 : 611.0) Protein phosphatase 2A regulatory B subunit family protein; FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: chloroplast, protein phosphatase type 2A complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT4G15415.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85563 : 599.0) no description available & (gnl|cdd|37296 : 520.0) no description available & (reliability: 1222.0) & (original description: Putative B'IOTA, Description = Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform, PFAM = PF01603)' T '29.4' 'protein.postranslational modification' 'niben101scf01593_535421-541403' '(at3g15260 : 439.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G28400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35917 : 240.0) no description available & (gnl|cdd|29062 : 215.0) no description available & (reliability: 878.0) & (original description: Putative At3g15260, Description = Probable protein phosphatase 2C 39, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf01594_544025-547352' '(at1g14980 : 153.0) Encodes mitochondrial-localized chaperonin 10 that complements the E.coli groES mutant. Its mRNA is upregulated in response to heat shock treatment and is expressed uniformly in various organs.; chaperonin 10 (CPN10); FUNCTIONS IN: copper ion binding, chaperone binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn10 (InterPro:IPR020818), GroES-like (InterPro:IPR011032), Chaperonin Cpn10, conserved site (InterPro:IPR018369), Chaperonin Cpn10, subgroup (InterPro:IPR001476); BEST Arabidopsis thaliana protein match is: GroES-like family protein (TAIR:AT1G23100.1); Has 9195 Blast hits to 9085 proteins in 2839 species: Archae - 7; Bacteria - 6160; Metazoa - 328; Fungi - 119; Plants - 343; Viruses - 2; Other Eukaryotes - 2236 (source: NCBI BLink). & (q96539|ch10_brana : 152.0) 10 kDa chaperonin (Protein CPN10) (Protein groES) - Brassica napus (Rape) & (gnl|cdd|36854 : 124.0) no description available & (gnl|cdd|73192 : 102.0) no description available & (reliability: 298.0) & (original description: Putative CPN10, Description = 10 kDa chaperonin, PFAM = PF00166)' T '29.4' 'protein.postranslational modification' 'niben101scf01596_125366-162047' '(at3g17850 : 1467.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G48490.3); Has 127463 Blast hits to 124461 proteins in 4737 species: Archae - 199; Bacteria - 14974; Metazoa - 47504; Fungi - 13120; Plants - 28745; Viruses - 516; Other Eukaryotes - 22405 (source: NCBI BLink). & (gnl|cdd|35826 : 625.0) no description available & (gnl|cdd|29142 : 299.0) no description available & (p15792|kpk1_phavu : 181.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 2934.0) & (original description: Putative IRE3, Description = Probable serine/threonine protein kinase IRE3, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01617_16412-22107' '(at5g50860 : 684.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: N-terminal protein myristoylation, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G54610.3); Has 127216 Blast hits to 125539 proteins in 4407 species: Archae - 96; Bacteria - 14251; Metazoa - 47558; Fungi - 13008; Plants - 31428; Viruses - 439; Other Eukaryotes - 20436 (source: NCBI BLink). & (gnl|cdd|35820 : 624.0) no description available & (gnl|cdd|29142 : 259.0) no description available & (q38772|cdc2a_antma : 214.0) Cell division control protein 2 homolog A (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (reliability: 1368.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01655_94888-100661' '(q40353|mmk2_medsa : 654.0) Mitogen-activated protein kinase homolog MMK2 (EC 2.7.11.24) - Medicago sativa (Alfalfa) & (at4g01370 : 651.0) Encodes a nuclear and cytoplasmically localized MAP kinase involved in mediating responses to pathogens. Its substrates include MKS1 and probably MAP65-1.The MAP65-1 interaction is involved in mediating cortical microtuble organization.; MAP kinase 4 (MPK4); FUNCTIONS IN: MAP kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), JNK MAP kinase (InterPro:IPR008351), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: MAP kinase 11 (TAIR:AT1G01560.2); Has 123445 Blast hits to 122024 proteins in 4656 species: Archae - 100; Bacteria - 13145; Metazoa - 47072; Fungi - 12439; Plants - 29862; Viruses - 477; Other Eukaryotes - 20350 (source: NCBI BLink). & (gnl|cdd|35879 : 507.0) no description available & (gnl|cdd|29142 : 265.0) no description available & (reliability: 1204.0) & (original description: Putative MMK2, Description = Mitogen-activated protein kinase homolog MMK2, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01656_83190-88528' '(at5g55830 : 248.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G53380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 195.0) no description available & (gnl|cdd|84552 : 190.0) no description available & (q8lpb4|pskr_dauca : 120.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 470.0) & (original description: Putative LecRK, Description = Clade XV lectin receptor kinase, PFAM = PF00069;PF00139)' T '29.4' 'protein.postranslational modification' 'niben101scf01661_227379-232899' '(at5g08160 : 602.0) Encodes a serine/threonine protein kinase.; serine/threonine protein kinase 3 (PK3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G32850.2); Has 37972 Blast hits to 37793 proteins in 1677 species: Archae - 67; Bacteria - 5765; Metazoa - 14817; Fungi - 4512; Plants - 5796; Viruses - 46; Other Eukaryotes - 6969 (source: NCBI BLink). & (gnl|cdd|37556 : 393.0) no description available & (gnl|cdd|29142 : 126.0) no description available & (reliability: 1204.0) & (original description: Putative PK1, Description = Serine/threonine protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01671_199676-203753' '(at3g62260 : 387.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G48040.1); Has 7565 Blast hits to 7530 proteins in 876 species: Archae - 12; Bacteria - 1215; Metazoa - 1621; Fungi - 781; Plants - 2594; Viruses - 9; Other Eukaryotes - 1333 (source: NCBI BLink). & (gnl|cdd|35917 : 234.0) no description available & (gnl|cdd|29062 : 225.0) no description available & (reliability: 774.0) & (original description: Putative At3g17250, Description = Probable protein phosphatase 2C 43, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf01671_470253-478157' '(at3g17510 : 585.0) Encodes a CBL-interacting protein kinase. Specifically interacts with ECT1 and ECT2.; CBL-interacting protein kinase 1 (CIPK1); CONTAINS InterPro DOMAIN/s: NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 17 (TAIR:AT1G48260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 454.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 334.0) no description available & (gnl|cdd|29142 : 288.0) no description available & (reliability: 1170.0) & (original description: Putative CIPK1, Description = CBL-interacting protein kinase 1, PFAM = PF00069;PF03822;PF02149)' T '29.4' 'protein.postranslational modification' 'niben101scf01671_561779-568463' '(at3g17510 : 578.0) Encodes a CBL-interacting protein kinase. Specifically interacts with ECT1 and ECT2.; CBL-interacting protein kinase 1 (CIPK1); CONTAINS InterPro DOMAIN/s: NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 17 (TAIR:AT1G48260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 434.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 337.0) no description available & (gnl|cdd|29142 : 283.0) no description available & (reliability: 1156.0) & (original description: Putative CIPK17, Description = CBL-interacting protein kinase 17, PFAM = PF00069;PF03822;PF02149)' T '29.4' 'protein.postranslational modification' 'niben101scf01681_1200491-1211337' '(at5g18700 : 1588.0) Encodes a microtubule-associated kinase-like protein RUNKEL (RUK). Contains a putative serine/threonine kinase domain and a microtubule-binding domain. RUK directly binds to microtubules in vitro and colocalizes with mitotic preprophase band, spindle, and phragmoplast in vivo. Required for cell plate expansion in cytokinesis.; Protein kinase family protein with ARM repeat domain; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Armadillo-like helical (InterPro:IPR011989), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G33940.2); Has 133671 Blast hits to 131461 proteins in 4761 species: Archae - 230; Bacteria - 15366; Metazoa - 49337; Fungi - 13216; Plants - 32681; Viruses - 728; Other Eukaryotes - 22113 (source: NCBI BLink). & (gnl|cdd|35817 : 614.0) no description available & (gnl|cdd|47550 : 253.0) no description available & (q5qn75|m2k1_orysa : 123.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 3176.0) & (original description: Putative RUK, Description = Serine/threonine-protein kinase RUNKEL, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01683_703049-716055' '(gnl|cdd|35820 : 477.0) no description available & (at1g54610 : 426.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G05050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29142 : 254.0) no description available & (q38772|cdc2a_antma : 225.0) Cell division control protein 2 homolog A (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (reliability: 846.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01683_703370-709958' '(at1g53050 : 189.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G09600.1); Has 124596 Blast hits to 123234 proteins in 4130 species: Archae - 92; Bacteria - 13981; Metazoa - 46101; Fungi - 12764; Plants - 31065; Viruses - 453; Other Eukaryotes - 20140 (source: NCBI BLink). & (gnl|cdd|35820 : 181.0) no description available & (gnl|cdd|29142 : 95.7) no description available & (q05006|cdc22_medsa : 85.1) Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Medicago sativa (Alfalfa) & (reliability: 378.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01685_339930-345592' '(at2g19130 : 210.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Apple-like (InterPro:IPR003609), PAN-1 domain (InterPro:IPR003014), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: receptor-like protein kinase 4 (TAIR:AT4G00340.1); Has 116366 Blast hits to 114909 proteins in 4332 species: Archae - 99; Bacteria - 12770; Metazoa - 42761; Fungi - 9470; Plants - 34242; Viruses - 402; Other Eukaryotes - 16622 (source: NCBI BLink). & (p17840|slsg3_braol : 127.0) S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage) & (gnl|cdd|85147 : 115.0) no description available & (reliability: 420.0) & (original description: Putative At2g19130, Description = Serine/threonine-protein kinase, PFAM = PF08276;PF00954)' T '29.4' 'protein.postranslational modification' 'niben101scf01685_342315-347455' '(at4g21380 : 629.0) encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels.; receptor kinase 3 (RK3); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), S-locus, receptor kinase (InterPro:IPR022126); BEST Arabidopsis thaliana protein match is: receptor kinase 2 (TAIR:AT1G65800.1); Has 120297 Blast hits to 118488 proteins in 4631 species: Archae - 97; Bacteria - 13304; Metazoa - 44101; Fungi - 10092; Plants - 34714; Viruses - 410; Other Eukaryotes - 17579 (source: NCBI BLink). & (gnl|cdd|36401 : 322.0) no description available & (p07761|slsg6_braol : 253.0) S-locus-specific glycoprotein S6 precursor (SLSG-6) - Brassica oleracea (Wild cabbage) & (gnl|cdd|47549 : 171.0) no description available & (reliability: 1214.0) & (original description: Putative At4g03230, Description = G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230, PFAM = PF07714;PF08276;PF01453;PF00954)' T '29.4' 'protein.postranslational modification' 'niben101scf01718_335127-343070' '(at3g51370 : 611.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), Protein phosphatase 2C (InterPro:IPR015655); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35919 : 405.0) no description available & (gnl|cdd|29062 : 172.0) no description available & (reliability: 1222.0) & (original description: Putative pp2C2, Description = Serine/threonine phosphatase family, 2C domain protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf01739_171944-180667' '(at2g35050 : 917.0) Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT1G16270.2); Has 123661 Blast hits to 120809 proteins in 5002 species: Archae - 120; Bacteria - 13694; Metazoa - 47002; Fungi - 10895; Plants - 32616; Viruses - 447; Other Eukaryotes - 18887 (source: NCBI BLink). & (gnl|cdd|35413 : 316.0) no description available & (gnl|cdd|87344 : 245.0) no description available & (q8l4h4|nork_medtr : 108.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1834.0) & (original description: Putative At1g79570, Description = Putative uncharacterized protein At1g79570, PFAM = PF07714;PF00564)' T '29.4' 'protein.postranslational modification' 'niben101scf01750_317215-641614' '(at2g27210 : 1584.0) BRI1 suppressor 1 (BSU1)-like 3 (BSL3); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, iron ion binding, phosphoprotein phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Metallophosphoesterase (InterPro:IPR004843), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 2 (TAIR:AT1G08420.2). & (q2qm47|bsl2_orysa : 1522.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35595 : 368.0) no description available & (gnl|cdd|47495 : 311.0) no description available & (reliability: 3130.0) & (original description: Putative BSL3, Description = Serine/threonine-protein phosphatase BSL3, PFAM = PF13418;PF13418;PF00149;PF07646)' T '29.4' 'protein.postranslational modification' 'niben101scf01764_427508-433636' '(at1g62400 : 360.0) high leaf temperature 1 (HT1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G58950.1); Has 132835 Blast hits to 130849 proteins in 5233 species: Archae - 136; Bacteria - 14325; Metazoa - 51137; Fungi - 12092; Plants - 33829; Viruses - 555; Other Eukaryotes - 20761 (source: NCBI BLink). & (gnl|cdd|35413 : 288.0) no description available & (gnl|cdd|47549 : 226.0) no description available & (q8lpb4|pskr_dauca : 106.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 720.0) & (original description: Putative HT1, Description = Serine/threonine-protein kinase HT1, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf01773_224434-229312' '(at3g62260 : 389.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G48040.1); Has 7565 Blast hits to 7530 proteins in 876 species: Archae - 12; Bacteria - 1215; Metazoa - 1621; Fungi - 781; Plants - 2594; Viruses - 9; Other Eukaryotes - 1333 (source: NCBI BLink). & (gnl|cdd|35917 : 227.0) no description available & (gnl|cdd|29062 : 226.0) no description available & (reliability: 778.0) & (original description: Putative At3g62260, Description = Probable protein phosphatase 2C 49, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf01784_602347-608081' '(at1g47380 : 685.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G68410.2); Has 5162 Blast hits to 5161 proteins in 415 species: Archae - 0; Bacteria - 290; Metazoa - 1152; Fungi - 442; Plants - 2230; Viruses - 7; Other Eukaryotes - 1041 (source: NCBI BLink). & (gnl|cdd|35917 : 180.0) no description available & (gnl|cdd|29062 : 179.0) no description available & (reliability: 1370.0) & (original description: Putative At1g47380, Description = Probable protein phosphatase 2C 12, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf01814_86025-92363' '(at3g50530 : 885.0) CDPK-related kinase; CDPK-related kinase (CRK); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: CDPK-related kinase 1 (TAIR:AT2G41140.1). & (p53681|crk_dauca : 879.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 372.0) no description available & (gnl|cdd|29142 : 283.0) no description available & (reliability: 1770.0) & (original description: Putative CRK5, Description = CDPK-related kinase 5, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01826_524171-526704' '(at4g03230 : 154.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G11340.1); Has 120947 Blast hits to 117758 proteins in 4568 species: Archae - 89; Bacteria - 13334; Metazoa - 43594; Fungi - 9240; Plants - 36995; Viruses - 386; Other Eukaryotes - 17309 (source: NCBI BLink). & (gnl|cdd|36401 : 101.0) no description available & (reliability: 308.0) & (original description: Putative IRK1, Description = Serine/threonine-protein kinase, PFAM = PF07714;PF11883)' T '29.4' 'protein.postranslational modification' 'niben101scf01851_459476-465965' '(at3g53030 : 698.0) Encodes a protein kinase SRPK4 that specifically targets Arabidopsis Ser/Arg-rich (SR) slicing factors involved in RNA metabolism. In vitro kinase assay showed that SRPK4 phosphorylates the SR protein RSp31.; ser/arg-rich protein kinase 4 (SRPK4); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: response to oxidative stress, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G44850.1); Has 38460 Blast hits to 29477 proteins in 1034 species: Archae - 2; Bacteria - 1392; Metazoa - 15648; Fungi - 7270; Plants - 6510; Viruses - 16; Other Eukaryotes - 7622 (source: NCBI BLink). & (gnl|cdd|36504 : 657.0) no description available & (gnl|cdd|29142 : 100.0) no description available & (reliability: 1396.0) & (original description: Putative dsk1, Description = Protein kinase dsk1, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01866_639603-645013' '(at5g59770 : 213.0) Protein-tyrosine phosphatase-like, PTPLA; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase-like, PTPLA (InterPro:IPR007482); BEST Arabidopsis thaliana protein match is: Protein-tyrosine phosphatase-like, PTPLA (TAIR:AT5G10480.2); Has 698 Blast hits to 698 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 336; Fungi - 172; Plants - 117; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|38397 : 142.0) no description available & (gnl|cdd|67978 : 122.0) no description available & (reliability: 426.0) & (original description: Putative PHS1, Description = 3-hydroxy acyl-CoA dehydratase, PFAM = PF04387)' T '29.4' 'protein.postranslational modification' 'niben101scf01890_260963-264336' '(at3g57120 : 404.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (TAIR:AT1G51940.1); Has 39405 Blast hits to 37293 proteins in 1762 species: Archae - 14; Bacteria - 4560; Metazoa - 7143; Fungi - 1468; Plants - 21966; Viruses - 110; Other Eukaryotes - 4144 (source: NCBI BLink). & (gnl|cdd|36401 : 177.0) no description available & (gnl|cdd|88314 : 94.9) no description available & (q8lkz1|nork_pea : 87.4) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 808.0) & (original description: Putative At3g57120, Description = Protein kinase family protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01907_105590-122285' '(at2g24765 : 328.0) GTPase required for Golgi targeting of GRIP domain proteins. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner; ADP-ribosylation factor 3 (ARF3); FUNCTIONS IN: protein binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: Golgi stack, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor A1B (TAIR:AT5G14670.1); Has 9110 Blast hits to 9109 proteins in 393 species: Archae - 2; Bacteria - 4; Metazoa - 4531; Fungi - 1457; Plants - 1456; Viruses - 3; Other Eukaryotes - 1657 (source: NCBI BLink). & (gnl|cdd|58034 : 307.0) no description available & (gnl|cdd|35293 : 274.0) no description available & (q06396|arf1_orysa : 224.0) ADP-ribosylation factor 1 (13 kDa cold-induced protein) - Oryza sativa (Rice) & (reliability: 656.0) & (original description: Putative ARF1, Description = ADP-ribosylation factor 1, PFAM = PF00025)' T '29.4' 'protein.postranslational modification' 'niben101scf01907_112846-122035' '(at2g24765 : 226.0) GTPase required for Golgi targeting of GRIP domain proteins. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner; ADP-ribosylation factor 3 (ARF3); FUNCTIONS IN: protein binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: Golgi stack, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor A1B (TAIR:AT5G14670.1); Has 9110 Blast hits to 9109 proteins in 393 species: Archae - 2; Bacteria - 4; Metazoa - 4531; Fungi - 1457; Plants - 1456; Viruses - 3; Other Eukaryotes - 1657 (source: NCBI BLink). & (gnl|cdd|58034 : 201.0) no description available & (gnl|cdd|35293 : 192.0) no description available & (o48920|arf_vigun : 164.0) ADP-ribosylation factor - Vigna unguiculata (Cowpea) & (reliability: 452.0) & (original description: Putative arf1, Description = ADP-ribosylation factor-like protein 1, PFAM = PF00025)' T '29.4' 'protein.postranslational modification' 'niben101scf01930_59677-64057' '(at5g57630 : 409.0) CBL-interacting protein kinase; CBL-interacting protein kinase 21 (CIPK21); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 23 (TAIR:AT1G30270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 311.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 259.0) no description available & (gnl|cdd|47550 : 240.0) no description available & (reliability: 818.0) & (original description: Putative CIPK21, Description = CBL-interacting serine/threonine-protein kinase 21, PFAM = PF00069;PF03822)' T '29.4' 'protein.postranslational modification' 'niben101scf01931_748085-753650' '(q40531|ntf6_tobac : 751.0) Mitogen-activated protein kinase homolog NTF6 (EC 2.7.11.24) (P43) - Nicotiana tabacum (Common tobacco) & (at4g01370 : 591.0) Encodes a nuclear and cytoplasmically localized MAP kinase involved in mediating responses to pathogens. Its substrates include MKS1 and probably MAP65-1.The MAP65-1 interaction is involved in mediating cortical microtuble organization.; MAP kinase 4 (MPK4); FUNCTIONS IN: MAP kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), JNK MAP kinase (InterPro:IPR008351), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: MAP kinase 11 (TAIR:AT1G01560.2); Has 123445 Blast hits to 122024 proteins in 4656 species: Archae - 100; Bacteria - 13145; Metazoa - 47072; Fungi - 12439; Plants - 29862; Viruses - 477; Other Eukaryotes - 20350 (source: NCBI BLink). & (gnl|cdd|35879 : 504.0) no description available & (gnl|cdd|29142 : 266.0) no description available & (reliability: 1076.0) & (original description: Putative NTF6, Description = Mitogen-activated protein kinase homolog NTF6, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01937_224850-235268' '(q9sec2|msra_lacsa : 374.0) Peptide methionine sulfoxide reductase (EC 1.8.4.11) (Protein-methionine-S-oxide reductase) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase) - Lactuca sativa (Garden lettuce) & (at4g25130 : 350.0) Encodes a chloroplast-localized methionine sulfoxide reductase that is a member of the MSRA family. Involved in protection of chloroplasts from oxidative stress.; peptide met sulfoxide reductase 4 (PMSR4); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: protein modification process, cellular response to oxidative stress; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Peptide methionine sulphoxide reductase MsrA (InterPro:IPR002569); BEST Arabidopsis thaliana protein match is: peptidemethionine sulfoxide reductase 1 (TAIR:AT5G61640.1); Has 10332 Blast hits to 10330 proteins in 2437 species: Archae - 129; Bacteria - 6211; Metazoa - 196; Fungi - 136; Plants - 235; Viruses - 1; Other Eukaryotes - 3424 (source: NCBI BLink). & (gnl|cdd|36848 : 303.0) no description available & (gnl|cdd|80482 : 228.0) no description available & (reliability: 700.0) & (original description: Putative msr, Description = Peptide-methionine (S)-S-oxide reductase, PFAM = PF01625)' T '29.4' 'protein.postranslational modification' 'niben101scf01938_670463-681348' '(at3g56490 : 237.0) Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro.; HIS triad family protein 3 (HIT3); FUNCTIONS IN: protein kinase C binding, adenylylsulfatase activity, zinc ion binding; INVOLVED IN: sulfur metabolic process, purine ribonucleotide metabolic process; LOCATED IN: peroxisome, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808), Histidine triad (HIT) protein (InterPro:IPR001310), Histidine triad motif (InterPro:IPR011151); BEST Arabidopsis thaliana protein match is: HISTIDINE TRIAD NUCLEOTIDE-BINDING 2 (TAIR:AT1G31160.1); Has 7957 Blast hits to 7956 proteins in 2592 species: Archae - 148; Bacteria - 4849; Metazoa - 343; Fungi - 139; Plants - 127; Viruses - 0; Other Eukaryotes - 2351 (source: NCBI BLink). & (p42856|zb14_maize : 216.0) 14 kDa zinc-binding protein (Protein kinase C inhibitor) (PKCI) - Zea mays (Maize) & (gnl|cdd|38485 : 187.0) no description available & (gnl|cdd|29589 : 158.0) no description available & (reliability: 474.0) & (original description: Putative HINT1, Description = Adenylylsulfatase HINT1, PFAM = PF01230)' T '29.4' 'protein.postranslational modification' 'niben101scf01940_52114-86533' '(at3g17850 : 1438.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G48490.3); Has 127463 Blast hits to 124461 proteins in 4737 species: Archae - 199; Bacteria - 14974; Metazoa - 47504; Fungi - 13120; Plants - 28745; Viruses - 516; Other Eukaryotes - 22405 (source: NCBI BLink). & (gnl|cdd|35826 : 637.0) no description available & (gnl|cdd|29142 : 299.0) no description available & (p15792|kpk1_phavu : 181.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 2876.0) & (original description: Putative IREH1, Description = Probable serine/threonine protein kinase IREH1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01962_54185-60346' '(at4g28880 : 586.0) casein kinase I-like 3 (ckl3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase I-like 4 (TAIR:AT4G28860.1); Has 64022 Blast hits to 63665 proteins in 2312 species: Archae - 48; Bacteria - 11126; Metazoa - 24220; Fungi - 7316; Plants - 9570; Viruses - 322; Other Eukaryotes - 11420 (source: NCBI BLink). & (gnl|cdd|36378 : 475.0) no description available & (gnl|cdd|29142 : 160.0) no description available & (reliability: 1172.0) & (original description: Putative CKL3, Description = Protein CASEIN KINASE I-LIKE 3, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01964_125950-134223' '(q40518|msk1_tobac : 784.0) Shaggy-related protein kinase NtK-1 (EC 2.7.11.1) - Nicotiana tabacum (Common tobacco) & (at5g26751 : 751.0) encodes a SHAGGY-related kinase involved in meristem organization.; shaggy-related kinase 11 (SK 11); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: meristem structural organization, phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: inflorescence meristem, whole plant, cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G05840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35877 : 573.0) no description available & (gnl|cdd|29142 : 229.0) no description available & (reliability: 1502.0) & (original description: Putative ASK1, Description = Shaggy-related protein kinase alpha, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01970_895366-900716' '(at1g60940 : 566.0) encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress.; SNF1-related protein kinase 2.10 (SNRK2.10); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G10940.1); Has 111565 Blast hits to 109717 proteins in 3008 species: Archae - 112; Bacteria - 13169; Metazoa - 40737; Fungi - 12092; Plants - 25831; Viruses - 494; Other Eukaryotes - 19130 (source: NCBI BLink). & (q7xqp4|sapk7_orysa : 555.0) Serine/threonine-protein kinase SAPK7 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 7) - Oryza sativa (Rice) & (gnl|cdd|35803 : 309.0) no description available & (gnl|cdd|29142 : 266.0) no description available & (reliability: 1132.0) & (original description: Putative SAPK7, Description = Serine/threonine-protein kinase SAPK7, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf01985_144971-148567' '(at1g03470 : 141.0) Kinase interacting (KIP1-like) family protein; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT2G47920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|71206 : 103.0) no description available & (reliability: 282.0) & (original description: Putative NET3A, Description = Protein NETWORKED 3A, PFAM = PF07765)' T '29.4' 'protein.postranslational modification' 'niben101scf01999_661838-667862' '(at4g21860 : 253.0) methionine sulfoxide reductase B 2 (MSRB2); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B3 (TAIR:AT4G04800.1). & (gnl|cdd|36074 : 217.0) no description available & (gnl|cdd|85585 : 197.0) no description available & (reliability: 506.0) & (original description: Putative MSRB5, Description = Peptide methionine sulfoxide reductase B5, PFAM = PF01641)' T '29.4' 'protein.postranslational modification' 'niben101scf02024_2666-5605' '(gnl|cdd|36401 : 139.0) no description available & (at3g57750 : 96.7) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G57710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative PGSC0003DMG400026436, Description = Putative ovule protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02050_70685-75174' '(at4g32300 : 434.0) S-domain-2 5 (SD2-5); FUNCTIONS IN: carbohydrate binding, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid autophosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT5G35370.1); Has 119450 Blast hits to 117822 proteins in 4317 species: Archae - 101; Bacteria - 12813; Metazoa - 43689; Fungi - 10139; Plants - 34770; Viruses - 395; Other Eukaryotes - 17543 (source: NCBI BLink). & (gnl|cdd|36401 : 323.0) no description available & (p17801|kpro_maize : 224.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 184.0) no description available & (reliability: 868.0) & (original description: Putative lecRK1, Description = Serine/threonine-protein kinase, PFAM = PF01453;PF00069;PF08276;PF00954)' T '29.4' 'protein.postranslational modification' 'niben101scf02050_118819-123275' '(at4g32300 : 369.0) S-domain-2 5 (SD2-5); FUNCTIONS IN: carbohydrate binding, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid autophosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT5G35370.1); Has 119450 Blast hits to 117822 proteins in 4317 species: Archae - 101; Bacteria - 12813; Metazoa - 43689; Fungi - 10139; Plants - 34770; Viruses - 395; Other Eukaryotes - 17543 (source: NCBI BLink). & (gnl|cdd|36401 : 317.0) no description available & (p17801|kpro_maize : 285.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 186.0) no description available & (reliability: 738.0) & (original description: Putative RLK1, Description = Serine/threonine-protein kinase, PFAM = PF00069;PF08276;PF01453)' T '29.4' 'protein.postranslational modification' 'niben101scf02050_182107-191754' '(at4g32300 : 349.0) S-domain-2 5 (SD2-5); FUNCTIONS IN: carbohydrate binding, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid autophosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT5G35370.1); Has 119450 Blast hits to 117822 proteins in 4317 species: Archae - 101; Bacteria - 12813; Metazoa - 43689; Fungi - 10139; Plants - 34770; Viruses - 395; Other Eukaryotes - 17543 (source: NCBI BLink). & (gnl|cdd|36401 : 318.0) no description available & (p17801|kpro_maize : 305.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 178.0) no description available & (reliability: 698.0) & (original description: Putative PGSC0003DMG400017315, Description = Serine/threonine-protein kinase, PFAM = PF08276;PF01453;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02072_67342-75443' '(at5g53000 : 445.0) PP2A-associated protein with a possible function in the chilling response; 2A phosphatase associated protein of 46 kD (TAP46); CONTAINS InterPro DOMAIN/s: TAP42-like protein (InterPro:IPR007304); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67777 : 242.0) no description available & (gnl|cdd|38041 : 173.0) no description available & (reliability: 890.0) & (original description: Putative TAP46, Description = PP2A regulatory subunit TAP46, PFAM = PF04177)' T '29.4' 'protein.postranslational modification' 'niben101scf02085_612922-640195' '(at2g37840 : 676.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, putative (InterPro:IPR020655), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G53930.2); Has 51534 Blast hits to 51036 proteins in 1321 species: Archae - 36; Bacteria - 3205; Metazoa - 22459; Fungi - 6825; Plants - 7556; Viruses - 105; Other Eukaryotes - 11348 (source: NCBI BLink). & (gnl|cdd|35815 : 340.0) no description available & (gnl|cdd|47550 : 282.0) no description available & (q75v57|sapk9_orysa : 155.0) Serine/threonine-protein kinase SAPK9 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 9) - Oryza sativa (Rice) & (reliability: 1352.0) & (original description: Putative ATG1C, Description = Serine/threonine-protein kinase ATG1c, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02085_2389076-2393753' '(at5g01700 : 363.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G36250.1); Has 5499 Blast hits to 5498 proteins in 290 species: Archae - 0; Bacteria - 8; Metazoa - 1364; Fungi - 621; Plants - 2393; Viruses - 5; Other Eukaryotes - 1108 (source: NCBI BLink). & (gnl|cdd|35917 : 204.0) no description available & (gnl|cdd|29062 : 190.0) no description available & (reliability: 726.0) & (original description: Putative At5g01700, Description = Probable protein phosphatase 2C 65, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf02124_139789-143013' '(gnl|cdd|35419 : 256.0) no description available & (at4g36950 : 243.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 21 (MAPKKK21); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 19 (TAIR:AT5G67080.1); Has 107885 Blast hits to 106960 proteins in 3009 species: Archae - 125; Bacteria - 11734; Metazoa - 40866; Fungi - 11018; Plants - 26454; Viruses - 500; Other Eukaryotes - 17188 (source: NCBI BLink). & (gnl|cdd|29142 : 200.0) no description available & (q75v57|sapk9_orysa : 91.7) Serine/threonine-protein kinase SAPK9 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 9) - Oryza sativa (Rice) & (reliability: 484.0) & (original description: Putative MAPKKK21, Description = Mitogen-activated protein kinase kinase kinase 21, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02128_138214-151620' '(at4g33500 : 226.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, phosphoprotein phosphatase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Sporulation stage II, protein E C-terminal (InterPro:IPR010822); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G16580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36593 : 201.0) no description available & (reliability: 452.0) & (original description: Putative gpm564, Description = 5-azacytidine resistance protein, putative, expressed, PFAM = PF07228)' T '29.4' 'protein.postranslational modification' 'niben101scf02133_761676-767029' '(at5g47750 : 773.0) D6 protein kinase like 2 (D6PKL2); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleolus, nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 1 (TAIR:AT4G26610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p47997|g11a_orysa : 713.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|35830 : 674.0) no description available & (gnl|cdd|47550 : 168.0) no description available & (reliability: 1546.0) & (original description: Putative D6PKL2, Description = Serine/threonine-protein kinase D6PKL2, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02159_100098-105793' '(p54152|msra_fraan : 291.0) Peptide methionine sulfoxide reductase (EC 1.8.4.11) (Protein-methionine-S-oxide reductase) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase) (Fruit-ripening protein E4) - Fragaria ananassa (Strawberry) & (at5g61640 : 255.0) ubiquitous enzyme that repairs oxidatively damaged proteins; peptidemethionine sulfoxide reductase 1 (PMSR1); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity, oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: response to oxidative stress, protein modification process; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptide methionine sulphoxide reductase MsrA (InterPro:IPR002569); BEST Arabidopsis thaliana protein match is: peptidemethionine sulfoxide reductase 3 (TAIR:AT5G07470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36848 : 255.0) no description available & (gnl|cdd|80482 : 220.0) no description available & (reliability: 510.0) & (original description: Putative E4, Description = Peptide methionine sulfoxide reductase, PFAM = PF01625)' T '29.4' 'protein.postranslational modification' 'niben101scf02169_49232-54139' '(at5g05510 : 414.0) Mad3/BUB1 homology region 1; CONTAINS InterPro DOMAIN/s: Mitotic checkpoint serine/threonine protein kinase, Bub1 (InterPro:IPR015661), Mad3/BUB1 homology region 1 (InterPro:IPR013212); BEST Arabidopsis thaliana protein match is: BUB1-related (BUB1: budding uninhibited by benzymidazol 1) (TAIR:AT2G33560.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36381 : 141.0) no description available & (gnl|cdd|87489 : 130.0) no description available & (reliability: 828.0) & (original description: Putative At5g05510, Description = At5g05510, PFAM = PF08311)' T '29.4' 'protein.postranslational modification' 'niben101scf02203_255582-261705' '(at4g35500 : 641.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G17530.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36504 : 311.0) no description available & (gnl|cdd|29142 : 103.0) no description available & (reliability: 1282.0) & (original description: Putative srpk2, Description = Protein kinase dsk1, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02207_478294-492246' '(q5z8z7|2aba_orysa : 318.0) Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform (PP2A, subunit B, alpha isoform) - Oryza sativa (Rice) & (at1g17720 : 314.0) type 2A protein serine/threonine phosphatase 55 kDa B; ATB BETA; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Protein phosphatase 2A, regulatory subunit PR55 (InterPro:IPR000009), Protein phosphatase 2A, regulatory subunit PR55, conserved site (InterPro:IPR018067), WD40 repeat, conserved site (InterPro:IPR019775), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform (TAIR:AT1G51690.3); Has 1042 Blast hits to 998 proteins in 278 species: Archae - 0; Bacteria - 71; Metazoa - 509; Fungi - 214; Plants - 122; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (gnl|cdd|36568 : 286.0) no description available & (gnl|cdd|34770 : 228.0) no description available & (reliability: 628.0) & (original description: Putative pab1, Description = Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B, PFAM = PF00400)' T '29.4' 'protein.postranslational modification' 'niben101scf02207_478314-490903' '(at1g17720 : 515.0) type 2A protein serine/threonine phosphatase 55 kDa B; ATB BETA; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Protein phosphatase 2A, regulatory subunit PR55 (InterPro:IPR000009), Protein phosphatase 2A, regulatory subunit PR55, conserved site (InterPro:IPR018067), WD40 repeat, conserved site (InterPro:IPR019775), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform (TAIR:AT1G51690.3); Has 1042 Blast hits to 998 proteins in 278 species: Archae - 0; Bacteria - 71; Metazoa - 509; Fungi - 214; Plants - 122; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (q5z8z7|2aba_orysa : 509.0) Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform (PP2A, subunit B, alpha isoform) - Oryza sativa (Rice) & (gnl|cdd|36568 : 450.0) no description available & (gnl|cdd|34770 : 376.0) no description available & (reliability: 1030.0) & (original description: Putative PP2AB2, Description = Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform, PFAM = PF00400)' T '29.4' 'protein.postranslational modification' 'niben101scf02217_848815-855824' '(at2g25760 : 1086.0) Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT3G13670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36379 : 243.0) no description available & (gnl|cdd|29142 : 114.0) no description available & (reliability: 2172.0) & (original description: Putative CKI, Description = Casein kinase I, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02221_528192-537393' '(at2g40120 : 564.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G73460.1); Has 88242 Blast hits to 86864 proteins in 3207 species: Archae - 89; Bacteria - 10122; Metazoa - 34089; Fungi - 11944; Plants - 14453; Viruses - 383; Other Eukaryotes - 17162 (source: NCBI BLink). & (gnl|cdd|35886 : 387.0) no description available & (gnl|cdd|29142 : 199.0) no description available & (q5sn53|mpk8_orysa : 135.0) Mitogen-activated protein kinase 8 (EC 2.7.11.24) (MAP kinase 8) (OsWJUMK1) (Wound- and JA-uninducible MAP kinase 1) - Oryza sativa (Rice) & (reliability: 1128.0) & (original description: Putative DYRK2, Description = Dual-specificity tyrosine regulated protein kinase 2, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02268_1380245-1384323' '(at3g02800 : 247.0) Tyrosine phosphatase family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic (InterPro:IPR020428), Protein-tyrosine phosphatase, SIW14-like (InterPro:IPR004861); BEST Arabidopsis thaliana protein match is: Phosphotyrosine protein phosphatases superfamily protein (TAIR:AT5G16480.1); Has 721 Blast hits to 711 proteins in 161 species: Archae - 0; Bacteria - 73; Metazoa - 5; Fungi - 358; Plants - 145; Viruses - 0; Other Eukaryotes - 140 (source: NCBI BLink). & (gnl|cdd|36785 : 203.0) no description available & (gnl|cdd|86260 : 177.0) no description available & (reliability: 476.0) & (original description: Putative At3g02800, Description = Atypical dual-specificity phosphatase, PFAM = PF03162)' T '29.4' 'protein.postranslational modification' 'niben101scf02286_86037-98840' '(at4g18593 : 129.0) dual specificity protein phosphatase-related; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29029 : 107.0) no description available & (gnl|cdd|36928 : 101.0) no description available & (reliability: 258.0) & (original description: Putative v1g126132, Description = Predicted protein, PFAM = PF00782)' T '29.4' 'protein.postranslational modification' 'niben101scf02302_170251-179941' '(q9swb4|parp3_soybn : 1127.0) Poly [ADP-ribose] polymerase 3 (EC 2.4.2.30) (PARP-3) (ADPRT 3) (NAD(+) ADP-ribosyltransferase 3) (Poly[ADP-ribose] synthetase 3) - Glycine max (Soybean) & (at5g22470 : 1087.0) NAD+ ADP-ribosyltransferases;NAD+ ADP-ribosyltransferases; FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity; INVOLVED IN: protein amino acid ADP-ribosylation; LOCATED IN: intracellular, nucleus; CONTAINS InterPro DOMAIN/s: WGR (InterPro:IPR008893), Poly(ADP-ribose) polymerase, regulatory domain (InterPro:IPR004102), PADR1 (InterPro:IPR012982), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: poly(ADP-ribose) polymerase 2 (TAIR:AT2G31320.1); Has 672 Blast hits to 662 proteins in 152 species: Archae - 0; Bacteria - 20; Metazoa - 347; Fungi - 74; Plants - 111; Viruses - 2; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|30068 : 306.0) no description available & (gnl|cdd|36255 : 231.0) no description available & (reliability: 2174.0) & (original description: Putative PARP3, Description = Poly [ADP-ribose] polymerase 3, PFAM = PF00644;PF02877;PF08063;PF00533;PF05406)' T '29.4' 'protein.postranslational modification' 'niben101scf02305_62048-67002' '(at1g11330 : 807.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-1 13 (TAIR:AT1G11350.1). & (gnl|cdd|36401 : 344.0) no description available & (p17801|kpro_maize : 233.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 185.0) no description available & (reliability: 1614.0) & (original description: Putative BnaA09g47660D, Description = BnaA09g47660D protein, PFAM = PF01453;PF07714;PF00954;PF00954;PF08276;PF11883)' T '29.4' 'protein.postranslational modification' 'niben101scf02318_38177-57160' '(at3g15220 : 757.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytoplasm, spindle; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G53165.2); Has 133641 Blast hits to 131568 proteins in 4406 species: Archae - 196; Bacteria - 15456; Metazoa - 49688; Fungi - 12950; Plants - 32844; Viruses - 666; Other Eukaryotes - 21841 (source: NCBI BLink). & (gnl|cdd|35422 : 494.0) no description available & (gnl|cdd|29142 : 300.0) no description available & (q5qn75|m2k1_orysa : 148.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1412.0) & (original description: Putative stk25a, Description = Zgc:92836, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02319_615623-625584' '(at5g25630 : 594.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: protein kinase family protein (TAIR:AT5G21222.1). & (q76c99|rf1_orysa : 207.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1086.0) & (original description: Putative At5g25630, Description = Pentatricopeptide repeat-containing protein At5g25630, PFAM = PF12854;PF01535;PF13041;PF13041;PF13041;PF13041)' T '29.4' 'protein.postranslational modification' 'niben101scf02346_374757-381189' '(at4g19110 : 560.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G45430.2); Has 112836 Blast hits to 111739 proteins in 3697 species: Archae - 107; Bacteria - 12214; Metazoa - 43480; Fungi - 11684; Plants - 25102; Viruses - 509; Other Eukaryotes - 19740 (source: NCBI BLink). & (gnl|cdd|35880 : 474.0) no description available & (gnl|cdd|29142 : 275.0) no description available & (q05006|cdc22_medsa : 213.0) Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Medicago sativa (Alfalfa) & (reliability: 1120.0) & (original description: Putative kgm, Description = GAMYB-binding protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02353_488413-501576' '(at3g19980 : 645.0) Encodes catalytic subunit of serine/threonine protein phosphatase 2A. It can associate with phytochromes A and B in vitro. Mutant plants display an accelerated flowering phenotype.; "flower-specific, phytochrome-associated protein phosphatase 3" (FYPP3); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT1G50370.1); Has 6822 Blast hits to 6670 proteins in 515 species: Archae - 81; Bacteria - 277; Metazoa - 2341; Fungi - 1410; Plants - 975; Viruses - 8; Other Eukaryotes - 1730 (source: NCBI BLink). & (gnl|cdd|35594 : 586.0) no description available & (q9xgt7|pp2a3_orysa : 390.0) Serine/threonine-protein phosphatase PP2A-3 catalytic subunit (EC 3.1.3.16) - Oryza sativa (Rice) & (gnl|cdd|29063 : 347.0) no description available & (reliability: 1290.0) & (original description: Putative FYPP3, Description = Phytochrome-associated serine/threonine-protein phosphatase 3, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'niben101scf02366_329954-336154' '(at1g61380 : 715.0) S-domain-1 29 (SD1-29); FUNCTIONS IN: carbohydrate binding, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid autophosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61390.1); Has 117235 Blast hits to 115670 proteins in 4264 species: Archae - 108; Bacteria - 12715; Metazoa - 42954; Fungi - 9640; Plants - 34538; Viruses - 385; Other Eukaryotes - 16895 (source: NCBI BLink). & (gnl|cdd|36401 : 335.0) no description available & (p17840|slsg3_braol : 289.0) S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage) & (gnl|cdd|47549 : 178.0) no description available & (reliability: 1384.0) & (original description: Putative At1g61550, Description = G-type lectin S-receptor-like serine/threonine-protein kinase At1g61550, PFAM = PF00954;PF11883;PF08276;PF01453;PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf02366_440048-445292' '(at5g66710 : 300.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase, ATN1-like (InterPro:IPR015784), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G50720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35413 : 243.0) no description available & (gnl|cdd|47549 : 207.0) no description available & (q38773|cdc2b_antma : 82.4) Cell division control protein 2 homolog B (EC 2.7.11.22) (EC 2.7.11.23) (Fragment) - Antirrhinum majus (Garden snapdragon) & (reliability: 600.0) & (original description: Putative ATN1, Description = Serine/threonine-protein kinase HT1, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf02368_13473-28393' '(at4g23050 : 281.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity, signal transducer activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT5G49470.3); Has 125163 Blast hits to 123569 proteins in 4990 species: Archae - 182; Bacteria - 13357; Metazoa - 47772; Fungi - 11074; Plants - 33184; Viruses - 511; Other Eukaryotes - 19083 (source: NCBI BLink). & (gnl|cdd|35413 : 213.0) no description available & (gnl|cdd|87344 : 154.0) no description available & (q8l4h4|nork_medtr : 91.3) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 514.0) & (original description: Putative ARK, Description = Serine/threonine-protein kinase CTR1, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf02375_78329-82287' '(at1g32230 : 182.0) Encodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family. Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants. Without stress treatment, RCD1 is localized in the nucleus. Under high salt or oxidative stress, RCD1 is found not only in the nucleus but also in the cytoplasm.; WWE protein-protein interaction domain protein family; CONTAINS InterPro DOMAIN/s: WWE domain (InterPro:IPR004170), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: similar to RCD one 1 (TAIR:AT2G35510.1); Has 178 Blast hits to 176 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative PGSC0003DMG400004959, Description = Poly [ADP-ribose] polymerase, PFAM = PF12174;PF00644)' T '29.4' 'protein.postranslational modification' 'niben101scf02390_117200-126045' '(at1g08750 : 556.0) Peptidase C13 family; FUNCTIONS IN: GPI-anchor transamidase activity, cysteine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C13, legumain (InterPro:IPR001096); BEST Arabidopsis thaliana protein match is: alpha-vacuolar processing enzyme (TAIR:AT2G25940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36563 : 457.0) no description available & (gnl|cdd|34803 : 331.0) no description available & (p49047|vpea_arath : 103.0) Vacuolar-processing enzyme alpha-isozyme precursor (EC 3.4.22.-) (Alpha-VPE) - Arabidopsis thaliana (Mouse-ear cress) & (reliability: 1112.0) & (original description: Putative CG4406, Description = Putative GPI-anchor transamidase, PFAM = PF01650)' T '29.4' 'protein.postranslational modification' 'niben101scf02400_73680-78704' '(at2g44830 : 850.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 2 (TAIR:AT5G47750.1); Has 114332 Blast hits to 86906 proteins in 3497 species: Archae - 36; Bacteria - 13769; Metazoa - 45842; Fungi - 12821; Plants - 20261; Viruses - 350; Other Eukaryotes - 21253 (source: NCBI BLink). & (gnl|cdd|35830 : 667.0) no description available & (p47997|g11a_orysa : 603.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 166.0) no description available & (reliability: 1700.0) & (original description: Putative Os06g0291600, Description = Protein kinase G11A, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02401_102076-107090' '(p93340|gblp_nicpl : 606.0) Guanine nucleotide-binding protein subunit beta-like protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g18130 : 504.0) Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1C has no phenotype on its own and probably acts redundantly with RACK1A and RACK1B.; receptor for activated C kinase 1C (RACK1C_AT); FUNCTIONS IN: nucleotide binding; INVOLVED IN: shoot development, root development; LOCATED IN: nucleolus, heterotrimeric G-protein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B (TAIR:AT1G48630.1); Has 88582 Blast hits to 37057 proteins in 965 species: Archae - 74; Bacteria - 10338; Metazoa - 34853; Fungi - 20136; Plants - 11319; Viruses - 6; Other Eukaryotes - 11856 (source: NCBI BLink). & (gnl|cdd|35500 : 433.0) no description available & (gnl|cdd|29257 : 226.0) no description available & (reliability: 1008.0) & (original description: Putative ARCA, Description = Guanine nucleotide-binding protein subunit beta-like protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '29.4' 'protein.postranslational modification' 'niben101scf02401_275974-284327' '(at1g73670 : 766.0) member of MAP Kinase; MAP kinase 15 (MPK15); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18150.3); Has 118424 Blast hits to 117259 proteins in 3821 species: Archae - 110; Bacteria - 13457; Metazoa - 43793; Fungi - 12258; Plants - 28693; Viruses - 571; Other Eukaryotes - 19542 (source: NCBI BLink). & (q5z9j0|mpk12_orysa : 738.0) Mitogen-activated protein kinase 12 (EC 2.7.11.24) (MAP kinase 12) (OsBWMK1) (Blast- and wound-induced MAP kinase 1) (MAP kinase 1) (OsMAPK1) - Oryza sativa (Rice) & (gnl|cdd|35879 : 480.0) no description available & (gnl|cdd|29142 : 260.0) no description available & (reliability: 1498.0) & (original description: Putative MPK9, Description = Mitogen-activated protein kinase 9, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02411_58081-63141' '(at1g11330 : 721.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-1 13 (TAIR:AT1G11350.1). & (gnl|cdd|36401 : 275.0) no description available & (p17840|slsg3_braol : 238.0) S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage) & (gnl|cdd|85147 : 155.0) no description available & (reliability: 1442.0) & (original description: Putative B120, Description = Serine/threonine-protein kinase, PFAM = PF08276;PF00069;PF01453;PF00954;PF11883)' T '29.4' 'protein.postranslational modification' 'niben101scf02420_469089-471529' '(at1g12310 : 243.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, nucleus, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G62820.1); Has 15156 Blast hits to 13043 proteins in 1439 species: Archae - 0; Bacteria - 35; Metazoa - 6065; Fungi - 3861; Plants - 3197; Viruses - 0; Other Eukaryotes - 1998 (source: NCBI BLink). & (p27164|calm3_pethy : 131.0) Calmodulin-related protein - Petunia hybrida (Petunia) & (gnl|cdd|35250 : 117.0) no description available & (gnl|cdd|34727 : 108.0) no description available & (reliability: 486.0) & (original description: Putative calA, Description = Calmodulin, PFAM = PF13405;PF13499)' T '29.4' 'protein.postranslational modification' 'niben101scf02437_275041-283837' '(at2g24360 : 632.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G31170.3); Has 132546 Blast hits to 130322 proteins in 4939 species: Archae - 142; Bacteria - 14767; Metazoa - 50018; Fungi - 12226; Plants - 34060; Viruses - 645; Other Eukaryotes - 20688 (source: NCBI BLink). & (gnl|cdd|35413 : 320.0) no description available & (gnl|cdd|47549 : 246.0) no description available & (q6x4a2|cipk1_orysa : 116.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1264.0) & (original description: Putative pk1, Description = Serine/threonine-protein kinase HT1, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf02439_121085-126955' '(at1g27070 : 269.0) 5'-AMP-activated protein kinase-related; BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase-related (TAIR:AT5G03420.1); Has 814 Blast hits to 789 proteins in 227 species: Archae - 3; Bacteria - 97; Metazoa - 231; Fungi - 191; Plants - 199; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|30346 : 96.1) no description available & (reliability: 538.0) & (original description: Putative SIP4, Description = SKIP interacting protein 4, PFAM = PF16561)' T '29.4' 'protein.postranslational modification' 'niben101scf02440_237163-243005' '(at4g27290 : 501.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor kinase 3 (TAIR:AT4G21380.1); Has 125077 Blast hits to 123040 proteins in 4681 species: Archae - 101; Bacteria - 14188; Metazoa - 45583; Fungi - 10059; Plants - 36201; Viruses - 449; Other Eukaryotes - 18496 (source: NCBI BLink). & (gnl|cdd|36401 : 324.0) no description available & (q8lkz1|nork_pea : 212.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|29142 : 177.0) no description available & (reliability: 908.0) & (original description: Putative PGSC0003DMG400044943, Description = Serine/threonine-protein kinase, PFAM = PF00954;PF00069;PF08276)' T '29.4' 'protein.postranslational modification' 'niben101scf02459_1077675-1084418' '(at1g71530 : 647.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G33770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35820 : 620.0) no description available & (gnl|cdd|29142 : 258.0) no description available & (q38772|cdc2a_antma : 221.0) Cell division control protein 2 homolog A (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (reliability: 1294.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02461_192286-205975' '(at1g16270 : 588.0) Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, nucleus; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT1G79570.1). & (gnl|cdd|35413 : 315.0) no description available & (gnl|cdd|87344 : 244.0) no description available & (q8l4h4|nork_medtr : 97.8) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1176.0) & (original description: Putative At1g79570, Description = Putative uncharacterized protein At1g79570, PFAM = PF00564;PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf02502_647339-657711' '(gnl|cdd|85563 : 693.0) no description available & (gnl|cdd|37296 : 648.0) no description available & (at3g09880 : 645.0) Encodes B' regulatory subunit of PP2A (AtB'beta).; ATB' BETA; FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: protein phosphatase type 2A complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT5G03470.1); Has 1186 Blast hits to 1156 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 571; Fungi - 167; Plants - 302; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink). & (reliability: 1290.0) & (original description: Putative B'ALPHA, Description = Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' alpha isoform, PFAM = PF01603)' T '29.4' 'protein.postranslational modification' 'niben101scf02513_860152-866852' '(at4g33500 : 229.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, phosphoprotein phosphatase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Sporulation stage II, protein E C-terminal (InterPro:IPR010822); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G16580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36593 : 200.0) no description available & (reliability: 458.0) & (original description: Putative gpm564, Description = Protein phosphatase 2C (PP2C)-like protein, PFAM = PF07228)' T '29.4' 'protein.postranslational modification' 'niben101scf02515_7943-11274' '(at5g01820 : 466.0) Encodes a CBL-interacting serine/threonine protein kinase.; serine/threonine protein kinase 1 (SR1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SOS3-interacting protein 4 (TAIR:AT2G30360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35803 : 337.0) no description available & (q6x4a2|cipk1_orysa : 313.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|29142 : 291.0) no description available & (reliability: 932.0) & (original description: Putative CIPK14, Description = Non-specific serine/threonine protein kinase, PFAM = PF03822;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02517_1145074-1237513' '(at3g59410 : 1506.0) GCN2; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, translation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Anticodon-binding (InterPro:IPR004154), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), RWD (InterPro:IPR006575); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT3G02760.1). & (gnl|cdd|36253 : 775.0) no description available & (gnl|cdd|29142 : 208.0) no description available & (p93422|syh_orysa : 110.0) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA ligase) (HisRS) - Oryza sativa (Rice) & (reliability: 3012.0) & (original description: Putative GCN2, Description = eIF-2-alpha kinase GCN2, PFAM = PF12745;PF00069;PF13393;PF05773)' T '29.4' 'protein.postranslational modification' 'niben101scf02517_1151387-1211044' '(at3g59410 : 1009.0) GCN2; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, translation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Anticodon-binding (InterPro:IPR004154), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), RWD (InterPro:IPR006575); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT3G02760.1). & (gnl|cdd|36253 : 590.0) no description available & (gnl|cdd|29142 : 200.0) no description available & (q5qn75|m2k1_orysa : 82.4) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 2018.0) & (original description: Putative GCN2, Description = Putative serine/threonine-protein kinase GCN2, PFAM = PF00069;PF13393)' T '29.4' 'protein.postranslational modification' 'niben101scf02522_163340-166235' '(at3g25840 : 98.2) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G13350.1); Has 128768 Blast hits to 102988 proteins in 2920 species: Archae - 165; Bacteria - 11507; Metazoa - 55869; Fungi - 16191; Plants - 15087; Viruses - 722; Other Eukaryotes - 29227 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative At1g13350, Description = Serine/threonine-protein kinase PRP4 like, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben101scf02525_331563-337466' '(at3g23360 : 189.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: fruit; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G15260.2); Has 1649 Blast hits to 1645 proteins in 226 species: Archae - 0; Bacteria - 36; Metazoa - 401; Fungi - 135; Plants - 907; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|29062 : 101.0) no description available & (gnl|cdd|35917 : 99.1) no description available & (reliability: 378.0) & (original description: Putative At3g23360, Description = Putative protein phosphatase 2C-like protein 44, PFAM = PF00481;PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf02526_321140-332891' '(at4g10730 : 822.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: stem, cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G24100.1); Has 123193 Blast hits to 121433 proteins in 3863 species: Archae - 107; Bacteria - 14168; Metazoa - 45829; Fungi - 11619; Plants - 30923; Viruses - 608; Other Eukaryotes - 19939 (source: NCBI BLink). & (gnl|cdd|35802 : 484.0) no description available & (gnl|cdd|29142 : 256.0) no description available & (q5qn75|m2k1_orysa : 125.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1644.0) & (original description: Putative At4g10730, Description = Putative serine/threonine protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02537_1466416-1476019' '(at1g22280 : 386.0) Encodes a phytochrome-associated protein, PAPP2C (phytochrome-associated protein phosphatase type 2C). PAPP2C interacts in the nucleus with phyA (phytochrome A) and phyB. Functions as a regulator of phytochrome-interacting factor PIF3 by dephosphorylating phytochromes in the nucleus.; phytochrome-associated protein phosphatase type 2C (PAPP2C); CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G34750.1). & (gnl|cdd|35917 : 227.0) no description available & (gnl|cdd|29062 : 213.0) no description available & (reliability: 772.0) & (original description: Putative Os04g0659500, Description = Probable protein phosphatase 2C 45, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf02563_205405-211493' '(at1g61380 : 727.0) S-domain-1 29 (SD1-29); FUNCTIONS IN: carbohydrate binding, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid autophosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61390.1); Has 117235 Blast hits to 115670 proteins in 4264 species: Archae - 108; Bacteria - 12715; Metazoa - 42954; Fungi - 9640; Plants - 34538; Viruses - 385; Other Eukaryotes - 16895 (source: NCBI BLink). & (gnl|cdd|36401 : 337.0) no description available & (p17840|slsg3_braol : 300.0) S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage) & (gnl|cdd|47549 : 179.0) no description available & (reliability: 1424.0) & (original description: Putative SD129, Description = G-type lectin S-receptor-like serine/threonine-protein kinase SD1-29, PFAM = PF00954;PF01453;PF08276;PF11883;PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf02581_136091-143936' '(at1g09020 : 391.0) putative activator subunit of SNF1-related protein kinase; homolog of yeast sucrose nonfermenting 4 (SNF4); CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase-related (TAIR:AT1G27070.1); Has 1379 Blast hits to 1368 proteins in 272 species: Archae - 14; Bacteria - 104; Metazoa - 613; Fungi - 295; Plants - 229; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36975 : 129.0) no description available & (gnl|cdd|73139 : 102.0) no description available & (reliability: 782.0) & (original description: Putative SNF4, Description = Sucrose nonfermenting 4-like protein, PFAM = PF00571;PF00571;PF16561)' T '29.4' 'protein.postranslational modification' 'niben101scf02581_138700-143686' '(at1g09020 : 185.0) putative activator subunit of SNF1-related protein kinase; homolog of yeast sucrose nonfermenting 4 (SNF4); CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase-related (TAIR:AT1G27070.1); Has 1379 Blast hits to 1368 proteins in 272 species: Archae - 14; Bacteria - 104; Metazoa - 613; Fungi - 295; Plants - 229; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|30346 : 97.6) no description available & (reliability: 370.0) & (original description: Putative SNF4, Description = AMP-activated protein kinase, gamma regulatory subunit, putative, PFAM = PF16561)' T '29.4' 'protein.postranslational modification' 'niben101scf02582_304752-311876' '(at3g44610 : 566.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 2 (TAIR:AT5G47750.1); Has 99456 Blast hits to 74546 proteins in 2417 species: Archae - 35; Bacteria - 11117; Metazoa - 41933; Fungi - 12113; Plants - 14694; Viruses - 280; Other Eukaryotes - 19284 (source: NCBI BLink). & (gnl|cdd|35830 : 536.0) no description available & (p47997|g11a_orysa : 407.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 148.0) no description available & (reliability: 1132.0) & (original description: Putative At3g44610, Description = At3g44610, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02606_239063-246037' '(at3g02750 : 551.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G36250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35917 : 209.0) no description available & (gnl|cdd|29062 : 194.0) no description available & (reliability: 1102.0) & (original description: Putative F9H3, Description = Phosphatase 2C family protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf02618_23199-33158' '(at1g73670 : 660.0) member of MAP Kinase; MAP kinase 15 (MPK15); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18150.3); Has 118424 Blast hits to 117259 proteins in 3821 species: Archae - 110; Bacteria - 13457; Metazoa - 43793; Fungi - 12258; Plants - 28693; Viruses - 571; Other Eukaryotes - 19542 (source: NCBI BLink). & (q53n72|mpk15_orysa : 644.0) Mitogen-activated protein kinase 15 (EC 2.7.11.24) (MAP kinase 15) - Oryza sativa (Rice) & (gnl|cdd|35879 : 473.0) no description available & (gnl|cdd|29142 : 269.0) no description available & (reliability: 1270.0) & (original description: Putative MPK11, Description = MAP kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02622_1073184-1110961' '(at3g10550 : 1002.0) Has 3'-phosphatase activity against both phosphatidylinositol-3,5-bisphosphate (PtdIns3,5P2) and Phosphatidylinositol-3-phosphate (PtdIns3P). The in vitro activity was higher with PtdIns3,5P2 than with PtdIns3P.; Myotubularin-like phosphatases II superfamily; FUNCTIONS IN: phosphatidylinositol-3-phosphatase activity, phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Myotubularin phosphatase (InterPro:IPR017906), GRAM (InterPro:IPR004182), Myotubularin-related (InterPro:IPR010569); BEST Arabidopsis thaliana protein match is: Myotubularin-like phosphatases II superfamily (TAIR:AT5G04540.1); Has 1697 Blast hits to 1550 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 1273; Fungi - 128; Plants - 40; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink). & (gnl|cdd|39672 : 677.0) no description available & (gnl|cdd|87116 : 140.0) no description available & (reliability: 2004.0) & (original description: Putative MTM1, Description = Phosphatidylinositol-3-phosphatase myotubularin-1, PFAM = PF06602)' T '29.4' 'protein.postranslational modification' 'niben101scf02625_150146-153890' '(at5g50240 : 340.0) L-isoaspartyl methyltransferase 2 (PIMT2)gene, alternatively spliced.; protein-l-isoaspartate methyltransferase 2 (PIMT2); FUNCTIONS IN: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity; INVOLVED IN: protein modification process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (InterPro:IPR000682); BEST Arabidopsis thaliana protein match is: protein-l-isoaspartate methyltransferase 1 (TAIR:AT3G48330.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43209|pimt_wheat : 327.0) Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) (Protein-beta-aspartate methyltransferase) (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase) - Triticum aestivum (Wheat) & (gnl|cdd|85261 : 271.0) no description available & (gnl|cdd|36874 : 249.0) no description available & (reliability: 680.0) & (original description: Putative PIMT1, Description = Protein-L-isoaspartate O-methyltransferase 1, PFAM = PF01135)' T '29.4' 'protein.postranslational modification' 'niben101scf02632_411680-418056' '(at5g08160 : 562.0) Encodes a serine/threonine protein kinase.; serine/threonine protein kinase 3 (PK3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G32850.2); Has 37972 Blast hits to 37793 proteins in 1677 species: Archae - 67; Bacteria - 5765; Metazoa - 14817; Fungi - 4512; Plants - 5796; Viruses - 46; Other Eukaryotes - 6969 (source: NCBI BLink). & (gnl|cdd|37556 : 360.0) no description available & (gnl|cdd|29142 : 124.0) no description available & (reliability: 1124.0) & (original description: Putative PK3, Description = AT5g08160, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02688_206964-375239' '(at5g60900 : 114.0) Encodes a receptor-like protein kinase.; receptor-like protein kinase 1 (RLK1); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: lectin protein kinase family protein (TAIR:AT1G34300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative PGSC0003DMG401029906, Description = Serine/threonine-protein kinase, PFAM = PF01453)' T '29.4' 'protein.postranslational modification' 'niben101scf02688_498844-503261' '(at5g60900 : 618.0) Encodes a receptor-like protein kinase.; receptor-like protein kinase 1 (RLK1); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: lectin protein kinase family protein (TAIR:AT1G34300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p17801|kpro_maize : 324.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|36401 : 323.0) no description available & (gnl|cdd|84488 : 168.0) no description available & (reliability: 1236.0) & (original description: Putative LECRK3, Description = G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3, PFAM = PF01453;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02705_133500-141674' '(at4g16970 : 571.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G19110.1); Has 37123 Blast hits to 30477 proteins in 1124 species: Archae - 42; Bacteria - 1923; Metazoa - 14429; Fungi - 5359; Plants - 8078; Viruses - 40; Other Eukaryotes - 7252 (source: NCBI BLink). & (gnl|cdd|36382 : 152.0) no description available & (gnl|cdd|47550 : 105.0) no description available & (reliability: 1142.0) & (original description: Putative dl4515c, Description = Kinase like protein, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02724_654199-668745' '(p48489|pp1_orysa : 577.0) Serine/threonine-protein phosphatase PP1 (EC 3.1.3.16) - Oryza sativa (Rice) & (at2g39840 : 563.0) Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers.; type one serine/threonine protein phosphatase 4 (TOPP4); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: type one serine/threonine protein phosphatase 2 (TAIR:AT5G59160.3); Has 7176 Blast hits to 6978 proteins in 618 species: Archae - 78; Bacteria - 533; Metazoa - 2415; Fungi - 1410; Plants - 987; Viruses - 16; Other Eukaryotes - 1737 (source: NCBI BLink). & (gnl|cdd|35595 : 474.0) no description available & (gnl|cdd|29063 : 416.0) no description available & (reliability: 1126.0) & (original description: Putative bimG, Description = Serine/threonine-protein phosphatase, PFAM = PF00149;PF16891)' T '29.4' 'protein.postranslational modification' 'niben101scf02769_216181-220606' '(at3g16560 : 455.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: pol-like 5 (TAIR:AT1G07630.1); Has 5306 Blast hits to 5268 proteins in 332 species: Archae - 0; Bacteria - 114; Metazoa - 1381; Fungi - 595; Plants - 2295; Viruses - 5; Other Eukaryotes - 916 (source: NCBI BLink). & (gnl|cdd|35919 : 299.0) no description available & (gnl|cdd|29062 : 153.0) no description available & (reliability: 910.0) & (original description: Putative At3g16560, Description = Probable protein phosphatase 2C 40, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf02790_167751-184211' '(at5g57035 : 743.0) U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination, response to stress; LOCATED IN: ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT2G19410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 260.0) no description available & (gnl|cdd|29142 : 161.0) no description available & (q8lpb4|pskr_dauca : 150.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1486.0) & (original description: Putative PUB34, Description = U-box domain-containing protein 34, PFAM = PF00582;PF07714;PF04564)' T '29.4' 'protein.postranslational modification' 'niben101scf02790_297597-320127' '(at4g33080 : 675.0) AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), Protein kinase-like domain (InterPro:IPR011009), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT2G19400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35825 : 666.0) no description available & (gnl|cdd|47550 : 274.0) no description available & (p47997|g11a_orysa : 149.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 1350.0) & (original description: Putative CBK1, Description = Serine/threonine-protein kinase CBK1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02790_301078-314063' '(at4g33080 : 557.0) AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), Protein kinase-like domain (InterPro:IPR011009), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT2G19400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35825 : 542.0) no description available & (gnl|cdd|47550 : 238.0) no description available & (p15792|kpk1_phavu : 137.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1114.0) & (original description: Putative CBK1, Description = Serine/threonine-protein kinase CBK1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02791_178494-196632' '(at1g43900 : 439.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 2 (TAIR:AT4G31750.1); Has 8097 Blast hits to 7992 proteins in 953 species: Archae - 12; Bacteria - 1506; Metazoa - 1655; Fungi - 811; Plants - 2687; Viruses - 9; Other Eukaryotes - 1417 (source: NCBI BLink). & (gnl|cdd|35917 : 250.0) no description available & (gnl|cdd|29062 : 247.0) no description available & (reliability: 878.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf02792_203517-215517' '(at1g54510 : 662.0) Encodes AtNEK1, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.; NIMA-related serine/threonine kinase 1 (NEK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NIMA-related kinase 2 (TAIR:AT3G04810.2). & (gnl|cdd|35809 : 400.0) no description available & (gnl|cdd|47550 : 249.0) no description available & (q5qn75|m2k1_orysa : 130.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1324.0) & (original description: Putative NEK2, Description = Serine/threonine-protein kinase Nek2, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02816_188041-192165' '(at1g17710 : 307.0) Pyridoxal phosphate phosphatase-related protein; FUNCTIONS IN: phosphatase activity; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate phosphatase-related (InterPro:IPR006384); BEST Arabidopsis thaliana protein match is: phosphate starvation-induced gene 2 (TAIR:AT1G73010.1); Has 346 Blast hits to 336 proteins in 99 species: Archae - 0; Bacteria - 6; Metazoa - 176; Fungi - 16; Plants - 103; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|70360 : 303.0) no description available & (gnl|cdd|38330 : 290.0) no description available & (reliability: 598.0) & (original description: Putative At4g29530, Description = Inorganic pyrophosphatase 3, PFAM = PF06888)' T '29.4' 'protein.postranslational modification' 'niben101scf02828_84880-96193' '(at4g18950 : 212.0) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Integrin-linked protein kinase (InterPro:IPR016253), Ankyrin repeat-containing domain (InterPro:IPR020683), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G58760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 118.0) no description available & (gnl|cdd|29142 : 107.0) no description available & (reliability: 416.0) & (original description: Putative PGSC0003DMG401030595, Description = Ankyrin-kinase, putative, PFAM = PF13857;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02829_343332-358556' '(at1g54510 : 592.0) Encodes AtNEK1, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.; NIMA-related serine/threonine kinase 1 (NEK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NIMA-related kinase 2 (TAIR:AT3G04810.2). & (gnl|cdd|35809 : 400.0) no description available & (gnl|cdd|29142 : 252.0) no description available & (q5qn75|m2k1_orysa : 132.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1184.0) & (original description: Putative NEK3, Description = Serine/threonine-protein kinase Nek3, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02829_505050-515435' '(at1g03080 : 900.0) kinase interacting (KIP1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053), KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT3G22790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71206 : 134.0) no description available & (gnl|cdd|35383 : 115.0) no description available & (reliability: 1800.0) & (original description: Putative NET1C, Description = Kinase interacting protein 1-like, PFAM = PF07765)' T '29.4' 'protein.postranslational modification' 'niben101scf02832_94504-111189' '(at3g19420 : 803.0) PTEN 2 (PEN2); FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, protein tyrosine/serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, dephosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Phosphatase tensin type (InterPro:IPR014019), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Tensin phosphatase, C2 domain (InterPro:IPR014020); BEST Arabidopsis thaliana protein match is: PTEN 3 (TAIR:AT3G50110.1); Has 4829 Blast hits to 1781 proteins in 265 species: Archae - 0; Bacteria - 174; Metazoa - 864; Fungi - 554; Plants - 143; Viruses - 4; Other Eukaryotes - 3090 (source: NCBI BLink). & (gnl|cdd|37494 : 351.0) no description available & (reliability: 1606.0) & (original description: Putative PTEN2A, Description = Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN2A, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben101scf02839_183947-187058' '(at5g53450 : 273.0) OBP3-responsive gene 1 (ORG1); FUNCTIONS IN: structural molecule activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase PLK4 (InterPro:IPR020664), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Plastid lipid-associated protein/fibrillin (InterPro:IPR006843), Protein kinase-like domain (InterPro:IPR011009); Has 596 Blast hits to 592 proteins in 153 species: Archae - 0; Bacteria - 3; Metazoa - 162; Fungi - 48; Plants - 310; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (reliability: 546.0) & (original description: Putative ORG1, Description = OBP3-responsive protein 1, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben101scf02839_183968-192706' '(at5g53450 : 786.0) OBP3-responsive gene 1 (ORG1); FUNCTIONS IN: structural molecule activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase PLK4 (InterPro:IPR020664), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Plastid lipid-associated protein/fibrillin (InterPro:IPR006843), Protein kinase-like domain (InterPro:IPR011009); Has 596 Blast hits to 592 proteins in 153 species: Archae - 0; Bacteria - 3; Metazoa - 162; Fungi - 48; Plants - 310; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|35814 : 83.8) no description available & (reliability: 1572.0) & (original description: Putative PAP14, Description = Probable plastid-lipid-associated protein 14, chloroplastic, PFAM = PF04755;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02857_161587-168401' '(at1g30270 : 760.0) Arabidopsis thaliana CBL-interacting protein kinase 23. CIPK23 serves as a positive regulator of the potassium transporter AKT1 by directly phosphorylating AKT1. CIPK23 is activated by the binding of two calcineurin B-like proteins, CBL1 and CBL9.; CBL-interacting protein kinase 23 (CIPK23); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 9 (TAIR:AT1G01140.1); Has 132391 Blast hits to 130112 proteins in 4449 species: Archae - 167; Bacteria - 15551; Metazoa - 48688; Fungi - 13416; Plants - 32041; Viruses - 531; Other Eukaryotes - 21997 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 610.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 362.0) no description available & (gnl|cdd|29142 : 302.0) no description available & (reliability: 1520.0) & (original description: Putative CIPK23, Description = CBL-interacting serine/threonine-protein kinase 23, PFAM = PF00069;PF03822)' T '29.4' 'protein.postranslational modification' 'niben101scf02857_395609-399496' '(at2g34650 : 529.0) Encodes a protein serine/threonine kinase that may act as a positive regulator of cellular auxin efflux, as a a binary switch for PIN polarity, and as a negative regulator of auxin signaling. Recessive mutants exhibit similar phenotypes as pin-formed mutants in flowers and inflorescence but distinct phenotypes in cotyledons and leaves. Expressed in the vascular tissue proximal to root and shoot meristems, shoot apex, and embryos. Expression is induced by auxin. Overexpression of the gene results in phenotypes in the root and shoot similar to those found in auxin-insensitive mutants. The protein physically interacts with TCH3 (TOUCH3) and PID-BINDING PROTEIN 1 (PBP1), a previously uncharacterized protein containing putative EF-hand calcium-binding motifs. Acts together with ENP (ENHANCER OF PINOID) to instruct precursor cells to elaborate cotyledons in the transition stage embryo. Interacts with PDK1. PID autophosphorylation is required for the ability of PID to phosphorylate an exogenous substrate. PID activation loop is required for PDK1-dependent PID phosphorylation and requires the PIF domain. Negative regulator of root hair growth. PID kinase activity is critical for the inhibition of root hair growth and for maintaining the proper subcellular localization of PID.; PINOID (PID); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: D6 protein kinase (TAIR:AT5G55910.1); Has 93882 Blast hits to 91860 proteins in 2892 species: Archae - 58; Bacteria - 12658; Metazoa - 35611; Fungi - 11097; Plants - 17324; Viruses - 331; Other Eukaryotes - 16803 (source: NCBI BLink). & (gnl|cdd|35830 : 491.0) no description available & (p15792|kpk1_phavu : 350.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|47550 : 246.0) no description available & (reliability: 1058.0) & (original description: Putative PID, Description = Protein kinase PINOID, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02868_84844-93354' '(at4g31750 : 439.0) Encodes HopW1-1-Interacting protein 2 (WIN2). Interacts with the P. syringae effector HopW1-1. WIN2 has protein phosphatase activity. Modulates plant defenses against bacteria. Three WIN proteins are identified so far (WIN1: AT1G80600; WIN2: AT4G31750; WIN3: AT5G13320).; HOPW1-1-interacting 2 (WIN2); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, defense response to bacterium; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G24940.1); Has 8917 Blast hits to 8860 proteins in 1196 species: Archae - 18; Bacteria - 2164; Metazoa - 1691; Fungi - 821; Plants - 2764; Viruses - 9; Other Eukaryotes - 1450 (source: NCBI BLink). & (gnl|cdd|35917 : 257.0) no description available & (gnl|cdd|29062 : 247.0) no description available & (reliability: 878.0) & (original description: Putative WIN2, Description = Probable protein phosphatase 2C 59, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf02908_321246-392103' '(gnl|cdd|85563 : 397.0) no description available & (gnl|cdd|37296 : 363.0) no description available & (at5g25510 : 337.0) Protein phosphatase 2A regulatory B subunit family protein; FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: chloroplast, protein phosphatase type 2A complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT4G15415.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 674.0) & (original description: Putative Sb02g031510, Description = Putative uncharacterized protein Sb02g031510, PFAM = PF01603)' T '29.4' 'protein.postranslational modification' 'niben101scf02908_321339-324811' '(gnl|cdd|85563 : 325.0) no description available & (gnl|cdd|37296 : 299.0) no description available & (at3g09880 : 266.0) Encodes B' regulatory subunit of PP2A (AtB'beta).; ATB' BETA; FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: protein phosphatase type 2A complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT5G03470.1); Has 1186 Blast hits to 1156 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 571; Fungi - 167; Plants - 302; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink). & (reliability: 532.0) & (original description: Putative B'ETA, Description = Serine/threonine protein phosphatase 2A regulatory subunit B, PFAM = PF01603;PF01603)' T '29.4' 'protein.postranslational modification' 'niben101scf02908_590041-604792' '(at4g38470 : 736.0) ACT-like protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Amino acid-binding ACT (InterPro:IPR002912), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: ACT-like protein tyrosine kinase family protein (TAIR:AT4G35780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 318.0) no description available & (gnl|cdd|87344 : 272.0) no description available & (q8l4h4|nork_medtr : 128.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1472.0) & (original description: Putative STY46, Description = Serine/threonine-protein kinase STY46, PFAM = PF07714;PF01842)' T '29.4' 'protein.postranslational modification' 'niben101scf02919_44285-71555' '(at3g17850 : 681.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G48490.3); Has 127463 Blast hits to 124461 proteins in 4737 species: Archae - 199; Bacteria - 14974; Metazoa - 47504; Fungi - 13120; Plants - 28745; Viruses - 516; Other Eukaryotes - 22405 (source: NCBI BLink). & (gnl|cdd|35826 : 362.0) no description available & (gnl|cdd|29142 : 231.0) no description available & (p15792|kpk1_phavu : 131.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1362.0) & (original description: Putative STPK15, Description = Serine/threonine protein kinase 15, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf02949_1339827-1344767' '(at3g05580 : 575.0) Calcineurin-like metallo-phosphoesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT5G27840.1); Has 7114 Blast hits to 6926 proteins in 613 species: Archae - 78; Bacteria - 489; Metazoa - 2408; Fungi - 1415; Plants - 981; Viruses - 10; Other Eukaryotes - 1733 (source: NCBI BLink). & (p48490|pp1_phavu : 567.0) Serine/threonine-protein phosphatase PP1 (EC 3.1.3.16) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|35595 : 449.0) no description available & (gnl|cdd|47495 : 399.0) no description available & (reliability: 1150.0) & (original description: Putative TOPP8, Description = Serine/threonine-protein phosphatase PP1 isozyme 8, PFAM = PF16891;PF00149)' T '29.4' 'protein.postranslational modification' 'niben101scf02955_504169-511555' '(at5g51760 : 223.0) Encodes AHG1 (ABA-hypersensitive germination 1), a putative protein phosphatase 2C (PP2C). Expressed in seeds. AHG1 functions in seed development and germination.; ABA-hypersensitive germination 1 (AHG1); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: seed germination, response to abscisic acid stimulus, seed development; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: seed; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 3 (TAIR:AT2G29380.1); Has 6503 Blast hits to 6478 proteins in 370 species: Archae - 6; Bacteria - 133; Metazoa - 1626; Fungi - 786; Plants - 2672; Viruses - 7; Other Eukaryotes - 1273 (source: NCBI BLink). & (gnl|cdd|29062 : 183.0) no description available & (gnl|cdd|35917 : 170.0) no description available & (reliability: 446.0) & (original description: Putative ABI1, Description = Phophatase 2C protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf02955_558849-565839' '(at5g51760 : 259.0) Encodes AHG1 (ABA-hypersensitive germination 1), a putative protein phosphatase 2C (PP2C). Expressed in seeds. AHG1 functions in seed development and germination.; ABA-hypersensitive germination 1 (AHG1); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: seed germination, response to abscisic acid stimulus, seed development; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: seed; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 3 (TAIR:AT2G29380.1); Has 6503 Blast hits to 6478 proteins in 370 species: Archae - 6; Bacteria - 133; Metazoa - 1626; Fungi - 786; Plants - 2672; Viruses - 7; Other Eukaryotes - 1273 (source: NCBI BLink). & (gnl|cdd|29062 : 220.0) no description available & (gnl|cdd|35917 : 218.0) no description available & (reliability: 518.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481;PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf03035_239720-246757' '(at4g28400 : 357.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: PP2C induced by AVRRPM1 (TAIR:AT2G20630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35917 : 233.0) no description available & (gnl|cdd|29062 : 212.0) no description available & (reliability: 714.0) & (original description: Putative At4g28400, Description = Probable protein phosphatase 2C 58, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf03069_61434-64206' '(at1g12310 : 251.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, nucleus, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G62820.1); Has 15156 Blast hits to 13043 proteins in 1439 species: Archae - 0; Bacteria - 35; Metazoa - 6065; Fungi - 3861; Plants - 3197; Viruses - 0; Other Eukaryotes - 1998 (source: NCBI BLink). & (p04352|calm_chlre : 138.0) Calmodulin (CaM) - Chlamydomonas reinhardtii & (gnl|cdd|35250 : 120.0) no description available & (gnl|cdd|34727 : 109.0) no description available & (reliability: 502.0) & (original description: Putative zbf3, Description = Calmodulin, PFAM = PF13405;PF13499)' T '29.4' 'protein.postranslational modification' 'niben101scf03072_244264-252989' '(at5g66710 : 351.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase, ATN1-like (InterPro:IPR015784), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G50720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35413 : 244.0) no description available & (gnl|cdd|47549 : 211.0) no description available & (q8lkz1|nork_pea : 89.7) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 702.0) & (original description: Putative BnaA07g37480D, Description = BnaA07g37480D protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf03072_247507-250250' '(at5g66710 : 149.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase, ATN1-like (InterPro:IPR015784), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G50720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35413 : 103.0) no description available & (gnl|cdd|47549 : 100.0) no description available & (reliability: 298.0) & (original description: Putative ATN1, Description = Serine/threonine-protein kinase HT1, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf03080_270828-277108' '(at4g33950 : 535.0) Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network.; OPEN STOMATA 1 (OST1); FUNCTIONS IN: calcium-dependent protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 (TAIR:AT5G66880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q75v57|sapk9_orysa : 517.0) Serine/threonine-protein kinase SAPK9 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 9) - Oryza sativa (Rice) & (gnl|cdd|35803 : 267.0) no description available & (gnl|cdd|47550 : 231.0) no description available & (reliability: 984.0) & (original description: Putative pk5, Description = Serine/threonine-protein kinase SAPK7, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf03104_233604-245855' '(at1g61850 : 1756.0) Encodes a non-specific lipase that hydrolyzes phospholipids as well as galactolipids, at both sn-1 and sn-2 positions. Involved in basal jasmonic acid biosynthesis by releasing the precursor fatty acid from membrane lipids. Mutant plants were impacted in resistance to fungus B. cinerea.; phospholipases;galactolipases; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 2 (TAIR:AT3G26500.1). & (gnl|cdd|39432 : 806.0) no description available & (gnl|cdd|85637 : 107.0) no description available & (reliability: 3512.0) & (original description: Putative PLA1, Description = Phospholipase A I, PFAM = PF01734;PF00514)' T '29.4' 'protein.postranslational modification' 'niben101scf03191_338638-344807' '(at3g23610 : 197.0) Encodes a dual specificity protein phosphatase whose activity is modulated by CaM binding.; dual specificity protein phosphatase 1 (DSPTP1); CONTAINS InterPro DOMAIN/s: Dual specificity phosphatase (InterPro:IPR020417), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: MAPK phosphatase 2 (TAIR:AT3G06110.3). & (gnl|cdd|29029 : 168.0) no description available & (gnl|cdd|36928 : 151.0) no description available & (q39491|ptp3_chleu : 96.3) Dual specificity protein phosphatase (EC 3.1.3.48) (EC 3.1.3.16) - Chlamydomonas eugametos & (reliability: 394.0) & (original description: Putative DSPTP1, Description = Dual specificity protein phosphatase 1, PFAM = PF00782)' T '29.4' 'protein.postranslational modification' 'niben101scf03222_522700-545490' '(at4g33080 : 823.0) AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), Protein kinase-like domain (InterPro:IPR011009), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT2G19400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35825 : 696.0) no description available & (gnl|cdd|47550 : 273.0) no description available & (p15792|kpk1_phavu : 165.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1646.0) & (original description: Putative ORF10, Description = Serine/threonine-protein kinase, PFAM = PF00433;PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf03224_482552-493573' '(at4g31860 : 474.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G25070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35916 : 245.0) no description available & (gnl|cdd|29062 : 242.0) no description available & (reliability: 948.0) & (original description: Putative ptc2, Description = Protein phosphatase 2C, PFAM = PF00481;PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf03254_417959-427775' '(at1g68830 : 844.0) STN7 protein kinase; required for state transitions, phosphorylation of the major antenna complex (LHCII) between PSII and PSI, and light adaptation; STT7 homolog STN7 (STN7); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: regulation of photosynthesis, light reaction, circadian rhythm; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B1;2 (TAIR:AT2G38620.2); Has 29571 Blast hits to 29413 proteins in 1565 species: Archae - 57; Bacteria - 3753; Metazoa - 11524; Fungi - 3757; Plants - 4496; Viruses - 50; Other Eukaryotes - 5934 (source: NCBI BLink). & (q84v18|stt7_chlre : 314.0) Serine/threonine-protein kinase stt7, chloroplast precursor (EC 2.7.11.1) - Chlamydomonas reinhardtii & (gnl|cdd|35814 : 172.0) no description available & (gnl|cdd|84488 : 99.6) no description available & (reliability: 1688.0) & (original description: Putative STN7, Description = Serine/threonine-protein kinase STN7, chloroplastic, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf03254_1151935-1157040' '(at5g40540 : 546.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase, ATN1-like (InterPro:IPR015784), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G27560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35413 : 293.0) no description available & (gnl|cdd|47549 : 202.0) no description available & (p29619|cdc22_orysa : 106.0) Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Oryza sativa (Rice) & (reliability: 1092.0) & (original description: Putative ATN1, Description = AT3g27560/MMJ24_11, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf03264_400193-406043' '(at2g34740 : 331.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G15260.2). & (gnl|cdd|35917 : 218.0) no description available & (gnl|cdd|29062 : 208.0) no description available & (reliability: 662.0) & (original description: Putative At4g28400, Description = Probable protein phosphatase 2C 58, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf03284_365097-378872' '(at2g18390 : 214.0) Encodes a member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. Mutant has abnormal mitosis and cell cycle control during seed development.; TITAN 5 (TTN5); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: in 6 processes; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor A1B (TAIR:AT5G14670.1); Has 10006 Blast hits to 10000 proteins in 420 species: Archae - 13; Bacteria - 39; Metazoa - 4544; Fungi - 1627; Plants - 1505; Viruses - 3; Other Eukaryotes - 2275 (source: NCBI BLink). & (gnl|cdd|58037 : 195.0) no description available & (gnl|cdd|35296 : 188.0) no description available & (p49076|arf_maize : 105.0) ADP-ribosylation factor - Zea mays (Maize) & (reliability: 428.0) & (original description: Putative ARL2, Description = ARL2, PFAM = PF00025)' T '29.4' 'protein.postranslational modification' 'niben101scf03291_118051-139395' '(at5g49470 : 809.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT1G67890.1). & (gnl|cdd|35413 : 329.0) no description available & (gnl|cdd|87344 : 251.0) no description available & (q8l4h4|nork_medtr : 119.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1618.0) & (original description: Putative At5g49470, Description = PAS domain-containing protein tyrosine kinase, PFAM = PF07714;PF00989)' T '29.4' 'protein.postranslational modification' 'niben101scf03300_547227-553448' '(at4g33950 : 634.0) Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network.; OPEN STOMATA 1 (OST1); FUNCTIONS IN: calcium-dependent protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 (TAIR:AT5G66880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q75h77|sapka_orysa : 618.0) Serine/threonine-protein kinase SAPK10 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 10) - Oryza sativa (Rice) & (gnl|cdd|35803 : 311.0) no description available & (gnl|cdd|29142 : 271.0) no description available & (reliability: 1178.0) & (original description: Putative SRK2E, Description = Serine/threonine-protein kinase SRK2E, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf03328_268804-281052' '(at1g17720 : 788.0) type 2A protein serine/threonine phosphatase 55 kDa B; ATB BETA; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Protein phosphatase 2A, regulatory subunit PR55 (InterPro:IPR000009), Protein phosphatase 2A, regulatory subunit PR55, conserved site (InterPro:IPR018067), WD40 repeat, conserved site (InterPro:IPR019775), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform (TAIR:AT1G51690.3); Has 1042 Blast hits to 998 proteins in 278 species: Archae - 0; Bacteria - 71; Metazoa - 509; Fungi - 214; Plants - 122; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (q5z8z7|2aba_orysa : 747.0) Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform (PP2A, subunit B, alpha isoform) - Oryza sativa (Rice) & (gnl|cdd|36568 : 602.0) no description available & (gnl|cdd|34770 : 433.0) no description available & (reliability: 1576.0) & (original description: Putative PP2AB2, Description = Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben101scf03340_239092-256987' '(at4g31770 : 525.0) Encodes a RNA lariat debranching enzyme required for embryogenesis.; debranching enzyme 1 (DBR1); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Lariat debranching enzyme, C-terminal (InterPro:IPR007708); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6au07|dbr1_orysa : 520.0) Lariat debranching enzyme (EC 3.1.-.-) - Oryza sativa (Rice) & (gnl|cdd|38074 : 480.0) no description available & (reliability: 1050.0) & (original description: Putative DBR1, Description = Lariat debranching enzyme, PFAM = PF00149;PF05011)' T '29.4' 'protein.postranslational modification' 'niben101scf03404_230549-235122' '(at3g08760 : 538.0) Encodes an osmotic stress-inducible kinase that functions as a negative regulator of osmotic stress signaling in plants.; ATSIK; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G15080.1); Has 42849 Blast hits to 42385 proteins in 1619 species: Archae - 20; Bacteria - 2695; Metazoa - 11858; Fungi - 1356; Plants - 23776; Viruses - 143; Other Eukaryotes - 3001 (source: NCBI BLink). & (gnl|cdd|36401 : 242.0) no description available & (q8l4h4|nork_medtr : 129.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 108.0) no description available & (reliability: 1076.0) & (original description: Putative ATSIK, Description = Putative receptor-like protein kinase, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf03425_334193-358090' '(at1g71860 : 431.0) Encodes a protein with tyrosine phosphatase activity that is downregulated in response to cold and upregulated in response to salt stress.; protein tyrosine phosphatase 1 (PTP1); FUNCTIONS IN: protein tyrosine phosphatase activity; INVOLVED IN: intracellular protein kinase cascade; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Protein-tyrosine phosphatase, receptor/non-receptor type (InterPro:IPR000242); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|28929 : 260.0) no description available & (gnl|cdd|36008 : 190.0) no description available & (reliability: 862.0) & (original description: Putative ptp1, Description = Protein tyrosine phosphatase, PFAM = PF00102)' T '29.4' 'protein.postranslational modification' 'niben101scf03453_327367-351291' '(at5g20930 : 862.0) Nuclear serine/threonine protein kinase that requires a coiled-coil region for oligomerization and catalytic activity. Required for leaf and flower development. Expression localized to the developing style by stage 13.; TOUSLED (TSL); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ataurora3 (TAIR:AT2G45490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36366 : 451.0) no description available & (gnl|cdd|47550 : 232.0) no description available & (p53681|crk_dauca : 99.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (reliability: 1724.0) & (original description: Putative bTSL, Description = Serine/threonine-protein kinase tousled-like 2, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf03552_1-7478' '(at3g45100 : 696.0) encodes Arabidopsis homolog of a conserved protein involved in the first step of the GPI biosynthetic pathway.; SETH2; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: GPI anchor biosynthetic process, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PIGA, GPI anchor biosynthesis (InterPro:IPR013234), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G73160.1); Has 19927 Blast hits to 19902 proteins in 2481 species: Archae - 910; Bacteria - 15350; Metazoa - 164; Fungi - 171; Plants - 192; Viruses - 0; Other Eukaryotes - 3140 (source: NCBI BLink). & (gnl|cdd|36327 : 584.0) no description available & (gnl|cdd|87485 : 165.0) no description available & (reliability: 1392.0) & (original description: Putative pigA, Description = GlcNAc transferase, PFAM = PF08288;PF00534)' T '29.4' 'protein.postranslational modification' 'niben101scf03570_302554-308895' '(p48489|pp1_orysa : 578.0) Serine/threonine-protein phosphatase PP1 (EC 3.1.3.16) - Oryza sativa (Rice) & (at2g39840 : 575.0) Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers.; type one serine/threonine protein phosphatase 4 (TOPP4); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: type one serine/threonine protein phosphatase 2 (TAIR:AT5G59160.3); Has 7176 Blast hits to 6978 proteins in 618 species: Archae - 78; Bacteria - 533; Metazoa - 2415; Fungi - 1410; Plants - 987; Viruses - 16; Other Eukaryotes - 1737 (source: NCBI BLink). & (gnl|cdd|35595 : 478.0) no description available & (gnl|cdd|29063 : 416.0) no description available & (reliability: 1150.0) & (original description: Putative bimG, Description = Serine/threonine-protein phosphatase, PFAM = PF00149;PF16891)' T '29.4' 'protein.postranslational modification' 'niben101scf03584_285143-290268' '(at1g72770 : 472.0) mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2C; regulates the activation of the Snf1-related kinase OST1 by abscisic acid.; homology to ABI1 (HAB1); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: homology to ABI2 (TAIR:AT1G17550.1). & (gnl|cdd|35917 : 252.0) no description available & (gnl|cdd|47660 : 239.0) no description available & (reliability: 944.0) & (original description: Putative HAB1, Description = Protein phosphatase 2C 16, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf03624_120085-127339' '(at4g24400 : 741.0) Encodes a CBL (calcineurin B-like calcium sensor proteins) -interacting serine/threonine protein kinase. Regulates the low-affinity phase of the primary nitrate response.; CBL-interacting protein kinase 8 (CIPK8); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, response to nitrate, root development, response to glucose stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G35410.1); Has 132609 Blast hits to 130467 proteins in 4740 species: Archae - 192; Bacteria - 15427; Metazoa - 49318; Fungi - 12831; Plants - 32044; Viruses - 538; Other Eukaryotes - 22259 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 493.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 339.0) no description available & (gnl|cdd|29142 : 293.0) no description available & (reliability: 1482.0) & (original description: Putative CIPK8, Description = CBL-interacting serine/threonine-protein kinase 8, PFAM = PF00069;PF03822)' T '29.4' 'protein.postranslational modification' 'niben101scf03683_382562-390439' '(o04858|pp13_tobac : 613.0) Serine/threonine-protein phosphatase PP1 isozyme 3 (EC 3.1.3.16) - Nicotiana tabacum (Common tobacco) & (at2g39840 : 591.0) Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers.; type one serine/threonine protein phosphatase 4 (TOPP4); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: type one serine/threonine protein phosphatase 2 (TAIR:AT5G59160.3); Has 7176 Blast hits to 6978 proteins in 618 species: Archae - 78; Bacteria - 533; Metazoa - 2415; Fungi - 1410; Plants - 987; Viruses - 16; Other Eukaryotes - 1737 (source: NCBI BLink). & (gnl|cdd|35595 : 475.0) no description available & (gnl|cdd|29063 : 409.0) no description available & (reliability: 1182.0) & (original description: Putative NPP3, Description = Serine/threonine-protein phosphatase PP1 isozyme 3, PFAM = PF00149;PF16891)' T '29.4' 'protein.postranslational modification' 'niben101scf03720_197815-205792' '(at1g67890 : 169.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, catalytic domain (InterPro:IPR000719), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT5G49470.3); Has 127928 Blast hits to 126175 proteins in 4896 species: Archae - 310; Bacteria - 16027; Metazoa - 47209; Fungi - 11347; Plants - 33277; Viruses - 520; Other Eukaryotes - 19238 (source: NCBI BLink). & (gnl|cdd|35413 : 114.0) no description available & (reliability: 332.0) & (original description: Putative Sb04g007765, Description = Putative uncharacterized protein Sb04g007765, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf03733_539079-545403' '(at4g26470 : 305.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; LOCATED IN: cytoplasm; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G24110.1); Has 6386 Blast hits to 5124 proteins in 870 species: Archae - 0; Bacteria - 22; Metazoa - 2243; Fungi - 905; Plants - 2494; Viruses - 0; Other Eukaryotes - 722 (source: NCBI BLink). & (reliability: 610.0) & (original description: Putative Os06g0609600, Description = Calcium-binding EF hand-like protein, PFAM = PF13499;PF13499)' T '29.4' 'protein.postranslational modification' 'niben101scf03735_474164-480723' '(at2g18030 : 340.0) Peptide methionine sulfoxide reductase family protein; FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity, oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: oxidation reduction, protein modification process, protein metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptide methionine sulphoxide reductase MsrA (InterPro:IPR002569); BEST Arabidopsis thaliana protein match is: peptidemethionine sulfoxide reductase 1 (TAIR:AT5G61640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36848 : 200.0) no description available & (gnl|cdd|80482 : 179.0) no description available & (p54152|msra_fraan : 107.0) Peptide methionine sulfoxide reductase (EC 1.8.4.11) (Protein-methionine-S-oxide reductase) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase) (Fruit-ripening protein E4) - Fragaria ananassa (Strawberry) & (reliability: 680.0) & (original description: Putative MSRA5, Description = Peptide methionine sulfoxide reductase A5, PFAM = PF01625)' T '29.4' 'protein.postranslational modification' 'niben101scf03761_80184-86589' '(gnl|cdd|35804 : 555.0) no description available & (at3g18750 : 521.0) Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.; with no lysine (K) kinase 6 (WNK6); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G49160.2). & (gnl|cdd|47550 : 206.0) no description available & (q5qn75|m2k1_orysa : 83.6) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1042.0) & (original description: Putative WNK4, Description = Probable serine/threonine-protein kinase WNK4, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf03766_662291-669006' '(gnl|cdd|85563 : 729.0) no description available & (at3g26020 : 703.0) Encodes protein phosphatase 2A (PP2A) B'eta subunit. Targeted to nucleus and cytosol.; Protein phosphatase 2A regulatory B subunit family protein; FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: cytosol, nucleus, protein phosphatase type 2A complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT1G13460.2); Has 1197 Blast hits to 1175 proteins in 189 species: Archae - 0; Bacteria - 2; Metazoa - 578; Fungi - 161; Plants - 301; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|37296 : 660.0) no description available & (reliability: 1406.0) & (original description: Putative B'ETA, Description = Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform, PFAM = PF01603)' T '29.4' 'protein.postranslational modification' 'niben101scf03766_1050182-1055058' '(p15792|kpk1_phavu : 712.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|35830 : 648.0) no description available & (at4g26610 : 642.0) D6 protein kinase like 1 (D6PKL1); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: D6 protein kinase (TAIR:AT5G55910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47550 : 230.0) no description available & (reliability: 1284.0) & (original description: Putative Adi3, Description = Protein kinase G11A, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf03768_391126-395111' '(at5g55830 : 246.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G53380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 199.0) no description available & (gnl|cdd|84552 : 186.0) no description available & (q8lpb4|pskr_dauca : 120.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 468.0) & (original description: Putative LecRK, Description = Clade XV lectin receptor kinase, PFAM = PF07714;PF00139)' T '29.4' 'protein.postranslational modification' 'niben101scf03816_315791-326073' '(at3g48260 : 542.0) Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases.; with no lysine (K) kinase 3 (WNK3); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 2 (TAIR:AT3G22420.1); Has 106620 Blast hits to 105555 proteins in 3648 species: Archae - 79; Bacteria - 10632; Metazoa - 39040; Fungi - 10406; Plants - 28734; Viruses - 420; Other Eukaryotes - 17309 (source: NCBI BLink). & (gnl|cdd|35804 : 502.0) no description available & (gnl|cdd|29142 : 177.0) no description available & (q5qn75|m2k1_orysa : 92.8) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1084.0) & (original description: Putative zik1, Description = ZIK1 protein, PFAM = PF00069;PF12202)' T '29.4' 'protein.postranslational modification' 'niben101scf03817_741421-752515' '(at3g44200 : 611.0) Encodes AtNek5, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.Interacts physically with plant kinesins ARK1 and ARK2. Mutants show defects in root epidermal cell morphology, trichome branching and other epidermal cell abnormalities suggesting a rol e in epidermal cell differentiation. NEK6 co-localizes with cortical microtubules.; "NIMA (never in mitosis, gene A)-related 6" (NEK6); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: microtubule-based process, epidermal cell differentiation; LOCATED IN: cortical microtubule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NIMA-related serine/threonine kinase 1 (TAIR:AT1G54510.3); Has 127749 Blast hits to 124714 proteins in 4408 species: Archae - 106; Bacteria - 14910; Metazoa - 47444; Fungi - 12949; Plants - 30417; Viruses - 519; Other Eukaryotes - 21404 (source: NCBI BLink). & (gnl|cdd|35809 : 380.0) no description available & (gnl|cdd|47550 : 262.0) no description available & (q6x4a2|cipk1_orysa : 128.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1222.0) & (original description: Putative stkc, Description = Serine/threonine-protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf03817_1594894-1602511' '(at5g22050 : 296.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G19300.1); Has 22508 Blast hits to 22253 proteins in 395 species: Archae - 4; Bacteria - 69; Metazoa - 1187; Fungi - 17; Plants - 20721; Viruses - 19; Other Eukaryotes - 491 (source: NCBI BLink). & (gnl|cdd|36401 : 196.0) no description available & (o24585|cri4_maize : 110.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 592.0) & (original description: Putative At5g22050, Description = Protein kinase family protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf03844_95214-102591' '(at4g33950 : 584.0) Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network.; OPEN STOMATA 1 (OST1); FUNCTIONS IN: calcium-dependent protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 (TAIR:AT5G66880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q75h77|sapka_orysa : 577.0) Serine/threonine-protein kinase SAPK10 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 10) - Oryza sativa (Rice) & (gnl|cdd|35803 : 302.0) no description available & (gnl|cdd|29142 : 265.0) no description available & (reliability: 1160.0) & (original description: Putative pk5, Description = Serine/threonine-protein kinase SAPK7, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf03852_274173-283026' '(at2g44680 : 151.0) Encodes casein kinase II beta chain, a CK2 regulatory subunit. Nuclear-localized CKB4 protein exists in vivo as different isoforms, resulting from phosphorylation on serine residues. The phosphorylated isoforms are the preferred substrate for ubiquitination and degradation by the proteasome pathway. Involved in regulation of circadian clock.; casein kinase II beta subunit 4 (CKB4); CONTAINS InterPro DOMAIN/s: Casein kinase II, regulatory subunit, alpha-helical (InterPro:IPR016149), Casein kinase II, regulatory subunit, beta-sheet (InterPro:IPR016150), Casein kinase II, regulatory subunit (InterPro:IPR000704); BEST Arabidopsis thaliana protein match is: casein kinase II beta chain 3 (TAIR:AT3G60250.2); Has 1093 Blast hits to 1091 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 429; Fungi - 285; Plants - 156; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (gnl|cdd|38302 : 111.0) no description available & (gnl|cdd|65042 : 101.0) no description available & (reliability: 302.0) & (original description: Putative Csnk2b, Description = Casein kinase II subunit beta, PFAM = PF01214;PF01214)' T '29.4' 'protein.postranslational modification' 'niben101scf03855_540787-546999' '(at1g54610 : 713.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G05050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35820 : 656.0) no description available & (gnl|cdd|29142 : 247.0) no description available & (q05006|cdc22_medsa : 220.0) Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Medicago sativa (Alfalfa) & (reliability: 1302.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf03878_172786-182994' '(at1g79640 : 720.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G14720.1). & (gnl|cdd|35802 : 482.0) no description available & (gnl|cdd|47550 : 252.0) no description available & (q5qn75|m2k1_orysa : 135.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1440.0) & (original description: Putative At1g79640, Description = Putative serine/threonine protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf03906_311103-321947' '(at4g08500 : 376.0) Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301. Mediates cold, salt, cadmium and wounding stress signalling. Phosphorylates MEK1.; MAPK/ERK kinase kinase 1 (MEKK1); FUNCTIONS IN: protein binding, kinase binding, DNA binding, MAP kinase kinase kinase activity, kinase activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 9 (TAIR:AT4G08480.1); Has 132336 Blast hits to 130259 proteins in 4567 species: Archae - 142; Bacteria - 14700; Metazoa - 49430; Fungi - 12971; Plants - 32949; Viruses - 685; Other Eukaryotes - 21459 (source: NCBI BLink). & (gnl|cdd|35419 : 281.0) no description available & (gnl|cdd|29142 : 270.0) no description available & (q5qn75|m2k1_orysa : 127.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 682.0) & (original description: Putative MEKK1, Description = Mitogen-activated protein kinase kinase kinase 1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf03923_77593-141918' '(at3g63340 : 1032.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein serine/threonine phosphatase activity, protein kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein phosphatase 2C-related (InterPro:IPR001932), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), Protein phosphatase 2C (InterPro:IPR015655); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G63320.1). & (gnl|cdd|35917 : 167.0) no description available & (gnl|cdd|29062 : 155.0) no description available & (reliability: 2064.0) & (original description: Putative At3g63330, Description = Probable inactive protein kinase At3g63330, PFAM = PF00481;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf03977_425539-431127' '(at1g62400 : 615.0) high leaf temperature 1 (HT1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G58950.1); Has 132835 Blast hits to 130849 proteins in 5233 species: Archae - 136; Bacteria - 14325; Metazoa - 51137; Fungi - 12092; Plants - 33829; Viruses - 555; Other Eukaryotes - 20761 (source: NCBI BLink). & (gnl|cdd|35413 : 302.0) no description available & (gnl|cdd|47549 : 241.0) no description available & (q8lpb4|pskr_dauca : 115.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1230.0) & (original description: Putative HT1, Description = Serine/threonine-protein kinase HT1, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf03985_202964-207528' '(at1g64300 : 704.0) Protein kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF1221 (InterPro:IPR010632), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT5G41730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70237 : 282.0) no description available & (gnl|cdd|35413 : 205.0) no description available & (reliability: 1408.0) & (original description: Putative At5g41730, Description = Protein kinase, PFAM = PF07714;PF06760)' T '29.4' 'protein.postranslational modification' 'niben101scf03990_71587-75716' '(at3g53380 : 875.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: carbohydrate binding, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Legume lectin, beta chain, Mn/Ca-binding site (InterPro:IPR019825); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G03140.1); Has 123161 Blast hits to 121629 proteins in 4558 species: Archae - 118; Bacteria - 14046; Metazoa - 45147; Fungi - 10620; Plants - 34718; Viruses - 434; Other Eukaryotes - 18078 (source: NCBI BLink). & (gnl|cdd|36401 : 316.0) no description available & (gnl|cdd|84552 : 204.0) no description available & (q8l4h4|nork_medtr : 188.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1750.0) & (original description: Putative LECRK81, Description = L-type lectin-domain containing receptor kinase VIII.1, PFAM = PF00069;PF00139)' T '29.4' 'protein.postranslational modification' 'niben101scf04003_107780-110868' '(at4g36950 : 308.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 21 (MAPKKK21); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 19 (TAIR:AT5G67080.1); Has 107885 Blast hits to 106960 proteins in 3009 species: Archae - 125; Bacteria - 11734; Metazoa - 40866; Fungi - 11018; Plants - 26454; Viruses - 500; Other Eukaryotes - 17188 (source: NCBI BLink). & (gnl|cdd|35419 : 253.0) no description available & (gnl|cdd|29142 : 226.0) no description available & (q5qn75|m2k1_orysa : 93.6) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 586.0) & (original description: Putative glysoja_003827, Description = Mitogen-activated protein kinase kinase kinase 3, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf04003_202815-206046' '(at4g36950 : 321.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 21 (MAPKKK21); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 19 (TAIR:AT5G67080.1); Has 107885 Blast hits to 106960 proteins in 3009 species: Archae - 125; Bacteria - 11734; Metazoa - 40866; Fungi - 11018; Plants - 26454; Viruses - 500; Other Eukaryotes - 17188 (source: NCBI BLink). & (gnl|cdd|35419 : 261.0) no description available & (gnl|cdd|29142 : 231.0) no description available & (q6x4a2|cipk1_orysa : 109.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 632.0) & (original description: Putative MAPKKK21, Description = Mitogen-activated protein kinase kinase kinase 21, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf04007_785583-795081' '(at5g09890 : 776.0) Protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT4G14350.2); Has 109819 Blast hits to 108536 proteins in 3259 species: Archae - 120; Bacteria - 13353; Metazoa - 38509; Fungi - 11858; Plants - 26725; Viruses - 411; Other Eukaryotes - 18843 (source: NCBI BLink). & (gnl|cdd|35825 : 662.0) no description available & (gnl|cdd|47550 : 275.0) no description available & (p47997|g11a_orysa : 152.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 1552.0) & (original description: Putative STK38L, Description = Serine/threonine-protein kinase 38-like, PFAM = PF00433;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf04018_1375847-1394021' '(at1g72710 : 649.0) Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus.; casein kinase 1-like protein 2 (CKL2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase 1 (TAIR:AT4G26100.1); Has 69362 Blast hits to 63919 proteins in 2309 species: Archae - 34; Bacteria - 10202; Metazoa - 23661; Fungi - 6612; Plants - 12027; Viruses - 386; Other Eukaryotes - 16440 (source: NCBI BLink). & (gnl|cdd|36378 : 489.0) no description available & (gnl|cdd|29142 : 158.0) no description available & (reliability: 1298.0) & (original description: Putative ckl5, Description = Casein kinase I isoform delta-like protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf04021_580736-583797' '(gnl|cdd|35802 : 126.0) no description available & (gnl|cdd|47550 : 101.0) no description available & (at4g14480 : 96.7) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G14720.1); Has 121171 Blast hits to 119626 proteins in 3383 species: Archae - 90; Bacteria - 13775; Metazoa - 44497; Fungi - 12077; Plants - 30839; Viruses - 477; Other Eukaryotes - 19416 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative PGSC0003DMG400010261, Description = , PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf04040_630300-642579' '(at1g72770 : 458.0) mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2C; regulates the activation of the Snf1-related kinase OST1 by abscisic acid.; homology to ABI1 (HAB1); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: homology to ABI2 (TAIR:AT1G17550.1). & (gnl|cdd|35917 : 250.0) no description available & (gnl|cdd|29062 : 237.0) no description available & (reliability: 916.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C 16, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf04103_444388-459499' '(at3g15610 : 480.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G52730.1); Has 43706 Blast hits to 23089 proteins in 800 species: Archae - 76; Bacteria - 7357; Metazoa - 15603; Fungi - 10314; Plants - 4879; Viruses - 0; Other Eukaryotes - 5477 (source: NCBI BLink). & (gnl|cdd|35499 : 450.0) no description available & (gnl|cdd|29257 : 145.0) no description available & (reliability: 960.0) & (original description: Putative strap, Description = Serine-threonine kinase receptor-associated protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '29.4' 'protein.postranslational modification' 'niben101scf04103_903571-925053' '(at2g20050 : 1462.0) protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, protein amino acid dephosphorylation, regulation of protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), cAMP/cGMP-dependent protein kinase (InterPro:IPR002373), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein phosphatase 2C-related (InterPro:IPR001932), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein kinase, catalytic domain (InterPro:IPR000719), Cyclic nucleotide-binding-like (InterPro:IPR018490), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G06270.1). & (gnl|cdd|35834 : 297.0) no description available & (gnl|cdd|29142 : 168.0) no description available & (q6x4a2|cipk1_orysa : 87.8) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 2924.0) & (original description: Putative At2g20050/At2g20040, Description = Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein, PFAM = PF00069;PF00027;PF00027;PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf04103_903736-913444' '(at2g20050 : 766.0) protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, protein amino acid dephosphorylation, regulation of protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), cAMP/cGMP-dependent protein kinase (InterPro:IPR002373), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein phosphatase 2C-related (InterPro:IPR001932), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein kinase, catalytic domain (InterPro:IPR000719), Cyclic nucleotide-binding-like (InterPro:IPR018490), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G06270.1). & (gnl|cdd|35917 : 162.0) no description available & (gnl|cdd|29062 : 146.0) no description available & (reliability: 1532.0) & (original description: Putative At3g06270, Description = Probable protein phosphatase 2C 35, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf04104_517421-523204' '(at2g44830 : 785.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 2 (TAIR:AT5G47750.1); Has 114332 Blast hits to 86906 proteins in 3497 species: Archae - 36; Bacteria - 13769; Metazoa - 45842; Fungi - 12821; Plants - 20261; Viruses - 350; Other Eukaryotes - 21253 (source: NCBI BLink). & (gnl|cdd|35830 : 656.0) no description available & (p47997|g11a_orysa : 576.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 164.0) no description available & (reliability: 1570.0) & (original description: Putative Adi3, Description = AvrPto-dependent Pto-interacting protein 3, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf04118_115466-123191' '(q9xgh7|pp2a_tobac : 646.0) Serine/threonine-protein phosphatase PP2A catalytic subunit (EC 3.1.3.16) - Nicotiana tabacum (Common tobacco) & (at3g58500 : 631.0) Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].; protein phosphatase 2A-4 (PP2A-4); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A-3 (TAIR:AT2G42500.1); Has 6816 Blast hits to 6628 proteins in 481 species: Archae - 80; Bacteria - 203; Metazoa - 2402; Fungi - 1409; Plants - 984; Viruses - 3; Other Eukaryotes - 1735 (source: NCBI BLink). & (gnl|cdd|35592 : 549.0) no description available & (gnl|cdd|29063 : 404.0) no description available & (reliability: 1262.0) & (original description: Putative PP2A4, Description = Serine/threonine-protein phosphatase PP2A-4 catalytic subunit, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'niben101scf04156_15592-21744' '(at4g27800 : 494.0) Choroplast protein phosphatase TAP38/PPH1 is required for efficient dephosphorylation of the LHCII anthena and state transition from state 2 to state 1.; thylakoid-associated phosphatase 38 (TAP38); FUNCTIONS IN: phosphatase activity, protein serine/threonine phosphatase activity; INVOLVED IN: photosynthetic electron transport chain, photosystem stoichiometry adjustment, dephosphorylation; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G31860.1); Has 5546 Blast hits to 5534 proteins in 320 species: Archae - 4; Bacteria - 50; Metazoa - 1347; Fungi - 661; Plants - 2413; Viruses - 9; Other Eukaryotes - 1062 (source: NCBI BLink). & (gnl|cdd|29062 : 195.0) no description available & (gnl|cdd|35917 : 173.0) no description available & (reliability: 988.0) & (original description: Putative PPH1, Description = Protein phosphatase 2C 57, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf04183_60640-65102' '(at2g19130 : 480.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Apple-like (InterPro:IPR003609), PAN-1 domain (InterPro:IPR003014), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: receptor-like protein kinase 4 (TAIR:AT4G00340.1); Has 116366 Blast hits to 114909 proteins in 4332 species: Archae - 99; Bacteria - 12770; Metazoa - 42761; Fungi - 9470; Plants - 34242; Viruses - 402; Other Eukaryotes - 16622 (source: NCBI BLink). & (gnl|cdd|36401 : 320.0) no description available & (p17801|kpro_maize : 232.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 161.0) no description available & (reliability: 960.0) & (original description: Putative Os01g0870500, Description = Os01g0870500 protein, PFAM = PF01453;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf04216_163446-175864' '(at1g71860 : 439.0) Encodes a protein with tyrosine phosphatase activity that is downregulated in response to cold and upregulated in response to salt stress.; protein tyrosine phosphatase 1 (PTP1); FUNCTIONS IN: protein tyrosine phosphatase activity; INVOLVED IN: intracellular protein kinase cascade; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Protein-tyrosine phosphatase, receptor/non-receptor type (InterPro:IPR000242); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|28929 : 255.0) no description available & (gnl|cdd|36008 : 189.0) no description available & (reliability: 878.0) & (original description: Putative PTP1, Description = Protein-tyrosine-phosphatase PTP1, PFAM = PF00102)' T '29.4' 'protein.postranslational modification' 'niben101scf04217_547223-549663' '(at1g12310 : 243.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, nucleus, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G62820.1); Has 15156 Blast hits to 13043 proteins in 1439 species: Archae - 0; Bacteria - 35; Metazoa - 6065; Fungi - 3861; Plants - 3197; Viruses - 0; Other Eukaryotes - 1998 (source: NCBI BLink). & (p27164|calm3_pethy : 133.0) Calmodulin-related protein - Petunia hybrida (Petunia) & (gnl|cdd|35250 : 117.0) no description available & (gnl|cdd|34727 : 106.0) no description available & (reliability: 486.0) & (original description: Putative calA, Description = Calmodulin, PFAM = PF13405;PF13499)' T '29.4' 'protein.postranslational modification' 'niben101scf04217_1155676-1158410' '(at5g08510 : 169.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G44230.1); Has 37926 Blast hits to 14003 proteins in 252 species: Archae - 2; Bacteria - 4; Metazoa - 48; Fungi - 107; Plants - 37187; Viruses - 0; Other Eukaryotes - 578 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative PGSC0003DMG400024200, Description = JMS10C05.1 protein, PFAM = PF13041)' T '29.4' 'protein.postranslational modification' 'niben101scf04220_752678-756024' '(at5g25110 : 580.0) member of AtCIPKs; CBL-interacting protein kinase 25 (CIPK25); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: defense response to fungus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 5 (TAIR:AT5G10930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 401.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 347.0) no description available & (gnl|cdd|29142 : 299.0) no description available & (reliability: 1160.0) & (original description: Putative CIPK25, Description = CBL-interacting serine/threonine-protein kinase 25, PFAM = PF03822;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf04249_10537-25032' '(at2g40860 : 896.0) protein kinase family protein / protein phosphatase 2C ( PP2C) family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein serine/threonine phosphatase activity, protein kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 2 (TAIR:AT4G31750.1); Has 131448 Blast hits to 130118 proteins in 4510 species: Archae - 166; Bacteria - 15372; Metazoa - 47633; Fungi - 11848; Plants - 35207; Viruses - 642; Other Eukaryotes - 20580 (source: NCBI BLink). & (gnl|cdd|47660 : 230.0) no description available & (gnl|cdd|35917 : 213.0) no description available & (q8lpb4|pskr_dauca : 100.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1792.0) & (original description: Putative At2g40860/At2g40870, Description = Protein kinase and PP2C-like domain-containing protein, PFAM = PF00481;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf04331_749218-761113' '(at3g22790 : 847.0) Kinase interacting (KIP1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: kinase interacting (KIP1-like) family protein (TAIR:AT4G14760.1); Has 216725 Blast hits to 82224 proteins in 3436 species: Archae - 3482; Bacteria - 43267; Metazoa - 93913; Fungi - 17447; Plants - 11833; Viruses - 1017; Other Eukaryotes - 45766 (source: NCBI BLink). & (gnl|cdd|71206 : 131.0) no description available & (gnl|cdd|35383 : 120.0) no description available & (reliability: 1694.0) & (original description: Putative NET1C, Description = Kinase interacting family protein, putative, PFAM = PF07765)' T '29.4' 'protein.postranslational modification' 'niben101scf04368_56475-62053' '(at5g59010 : 821.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT3G54030.1); Has 21140 Blast hits to 20932 proteins in 637 species: Archae - 6; Bacteria - 562; Metazoa - 1681; Fungi - 205; Plants - 18085; Viruses - 31; Other Eukaryotes - 570 (source: NCBI BLink). & (gnl|cdd|36401 : 200.0) no description available & (o24585|cri4_maize : 114.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 106.0) no description available & (reliability: 1560.0) & (original description: Putative At5g41260, Description = Probable serine/threonine-protein kinase At5g41260, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf04375_1146942-1150249' '(at1g14980 : 150.0) Encodes mitochondrial-localized chaperonin 10 that complements the E.coli groES mutant. Its mRNA is upregulated in response to heat shock treatment and is expressed uniformly in various organs.; chaperonin 10 (CPN10); FUNCTIONS IN: copper ion binding, chaperone binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn10 (InterPro:IPR020818), GroES-like (InterPro:IPR011032), Chaperonin Cpn10, conserved site (InterPro:IPR018369), Chaperonin Cpn10, subgroup (InterPro:IPR001476); BEST Arabidopsis thaliana protein match is: GroES-like family protein (TAIR:AT1G23100.1); Has 9195 Blast hits to 9085 proteins in 2839 species: Archae - 7; Bacteria - 6160; Metazoa - 328; Fungi - 119; Plants - 343; Viruses - 2; Other Eukaryotes - 2236 (source: NCBI BLink). & (q96539|ch10_brana : 149.0) 10 kDa chaperonin (Protein CPN10) (Protein groES) - Brassica napus (Rape) & (gnl|cdd|36854 : 118.0) no description available & (gnl|cdd|73192 : 98.7) no description available & (reliability: 298.0) & (original description: Putative hspe1, Description = Heat shock 10 protein 1 (Chaperonin 10), PFAM = PF00166)' T '29.4' 'protein.postranslational modification' 'niben101scf04377_309244-312821' '(at1g53700 : 511.0) The WAG1 and its homolog, WAG2 each encodes a protein-serine/threonine kinase that are nearly 70% identical to PsPK3 protein. All three together with CsPK3 belong to PsPK3-type kinases. At the N-terminus, all four possess a serine/threonine-rich domain. They are closely related to Arabidopsis kinases PINOID. wag1/wag2 double mutants exhibit a pronounced wavy root phenotype when grown vertically on agar plates (while wild-type plants develop wavy roots only on plates inclined to angles less than 90 degrees), indicating an overlapping role for WAG1 and WAG2 as suppressors of root waving. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons.; WAG 1 (WAG1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G14370.1); Has 97126 Blast hits to 96120 proteins in 2766 species: Archae - 63; Bacteria - 12090; Metazoa - 36361; Fungi - 11348; Plants - 19901; Viruses - 394; Other Eukaryotes - 16969 (source: NCBI BLink). & (gnl|cdd|35830 : 494.0) no description available & (p47997|g11a_orysa : 335.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 235.0) no description available & (reliability: 986.0) & (original description: Putative WAG2, Description = Serine/threonine-protein kinase WAG2, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf04403_339362-361212' '(at1g69220 : 786.0) Encodes a putative serine/threonine kinase (SIK1).; SIK1; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: mitochondrion, chromosome, centromeric region, chromosome, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G53165.2); Has 135073 Blast hits to 131353 proteins in 4820 species: Archae - 174; Bacteria - 17099; Metazoa - 50056; Fungi - 12728; Plants - 33057; Viruses - 559; Other Eukaryotes - 21400 (source: NCBI BLink). & (gnl|cdd|35796 : 433.0) no description available & (gnl|cdd|29142 : 301.0) no description available & (q5qn75|m2k1_orysa : 148.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1572.0) & (original description: Putative krsA, Description = Protein serine/threonine kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf04417_57004-65880' '(at1g79640 : 773.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G14720.1). & (gnl|cdd|35802 : 493.0) no description available & (gnl|cdd|29142 : 252.0) no description available & (q5qn75|m2k1_orysa : 136.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1546.0) & (original description: Putative fray2, Description = Serine/threonine-protein kinase fray2, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf04417_57007-85983' '(at1g79640 : 450.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G14720.1). & (gnl|cdd|35802 : 219.0) no description available & (gnl|cdd|29142 : 98.7) no description available & (reliability: 900.0) & (original description: Putative OXSR1, Description = Serine/threonine-protein kinase fray2, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf04432_23417-26805' '(at1g03390 : 601.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G41040.1); Has 2639 Blast hits to 2624 proteins in 137 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 51; Plants - 2580; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|66174 : 257.0) no description available & (o24645|hcbt1_diaca : 179.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1202.0) & (original description: Putative At1g03390, Description = F21B7.2, PFAM = PF02458)' T '29.4' 'protein.postranslational modification' 'niben101scf04448_190797-195172' '(at5g60900 : 374.0) Encodes a receptor-like protein kinase.; receptor-like protein kinase 1 (RLK1); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: lectin protein kinase family protein (TAIR:AT1G34300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 315.0) no description available & (p17801|kpro_maize : 282.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 169.0) no description available & (reliability: 748.0) & (original description: Putative Os08g0230800, Description = Serine/threonine-protein kinase, PFAM = PF01453;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf04473_45602-49455' '(at3g05640 : 514.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: response to water deprivation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G27930.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35917 : 199.0) no description available & (gnl|cdd|29062 : 187.0) no description available & (reliability: 1028.0) & (original description: Putative At3g05640, Description = Probable protein phosphatase 2C 34, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf04489_100162-113724' '(at3g16030 : 622.0) CALLUS EXPRESSION OF RBCS 101 (CES101); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT4G21390.1); Has 121576 Blast hits to 119500 proteins in 4422 species: Archae - 101; Bacteria - 13477; Metazoa - 44302; Fungi - 10440; Plants - 35232; Viruses - 450; Other Eukaryotes - 17574 (source: NCBI BLink). & (gnl|cdd|36401 : 336.0) no description available & (q8l4h4|nork_medtr : 205.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 174.0) no description available & (reliability: 1244.0) & (original description: Putative rlk1, Description = Cysteine-rich RLK (Receptor-like kinase) protein, PFAM = PF08276;PF07714;PF01453;PF11883)' T '29.4' 'protein.postranslational modification' 'niben101scf04514_453446-460347' '(at3g02750 : 554.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G36250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35917 : 208.0) no description available & (gnl|cdd|29062 : 186.0) no description available & (reliability: 1108.0) & (original description: Putative F9H3, Description = Phosphatase 2C family protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf04526_176483-182068' '(at5g06750 : 446.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: mitochondrion, protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35919 : 331.0) no description available & (gnl|cdd|29062 : 162.0) no description available & (reliability: 892.0) & (original description: Putative pp2C2, Description = Serine/threonine phosphatase family, 2C domain protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf04555_264091-270672' '(at5g24090 : 392.0) Chitinase A (class III) expressed exclusively under environmental stress conditions.; chitinase A (CHIA); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to salt stress, response to cold, cellular response to water deprivation, response to wounding, response to light intensity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, chitinase active site (InterPro:IPR001579), Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p51614|chit3_vitvi : 392.0) Acidic endochitinase precursor (EC 3.2.1.14) - Vitis vinifera (Grape) & (gnl|cdd|39899 : 336.0) no description available & (gnl|cdd|47549 : 173.0) no description available & (reliability: 758.0) & (original description: Putative achi, Description = Serine/threonine-protein kinase, PFAM = PF00704;PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf04556_536688-546049' '(o04860|pp2a5_tobac : 666.0) Serine/threonine-protein phosphatase PP2A-5 catalytic subunit (EC 3.1.3.16) - Nicotiana tabacum (Common tobacco) & (at2g42500 : 622.0) Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].; protein phosphatase 2A-3 (PP2A-3); FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A-4 (TAIR:AT3G58500.1). & (gnl|cdd|35592 : 546.0) no description available & (gnl|cdd|29063 : 400.0) no description available & (reliability: 1244.0) & (original description: Putative NPP5, Description = Serine/threonine-protein phosphatase PP2A-5 catalytic subunit, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'niben101scf04570_129325-134494' '(at1g11340 : 637.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), EGF-like, type 3 (InterPro:IPR000742), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G11410.1); Has 123060 Blast hits to 121063 proteins in 4656 species: Archae - 122; Bacteria - 13729; Metazoa - 45275; Fungi - 10148; Plants - 35343; Viruses - 433; Other Eukaryotes - 18010 (source: NCBI BLink). & (gnl|cdd|36401 : 336.0) no description available & (p17801|kpro_maize : 256.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 174.0) no description available & (reliability: 1274.0) & (original description: Putative ARK3, Description = Serine/threonine-protein kinase, PFAM = PF08276;PF00954;PF07714;PF01453)' T '29.4' 'protein.postranslational modification' 'niben101scf04570_565935-569516' '(gnl|cdd|80482 : 146.0) no description available & (gnl|cdd|36848 : 138.0) no description available & (at4g25130 : 113.0) Encodes a chloroplast-localized methionine sulfoxide reductase that is a member of the MSRA family. Involved in protection of chloroplasts from oxidative stress.; peptide met sulfoxide reductase 4 (PMSR4); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: protein modification process, cellular response to oxidative stress; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Peptide methionine sulphoxide reductase MsrA (InterPro:IPR002569); BEST Arabidopsis thaliana protein match is: peptidemethionine sulfoxide reductase 1 (TAIR:AT5G61640.1); Has 10332 Blast hits to 10330 proteins in 2437 species: Archae - 129; Bacteria - 6211; Metazoa - 196; Fungi - 136; Plants - 235; Viruses - 1; Other Eukaryotes - 3424 (source: NCBI BLink). & (q9sec2|msra_lacsa : 113.0) Peptide methionine sulfoxide reductase (EC 1.8.4.11) (Protein-methionine-S-oxide reductase) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase) - Lactuca sativa (Garden lettuce) & (reliability: 226.0) & (original description: Putative PGSC0003DMG400010414, Description = Peptide methionine sulfoxide reductase MsrA, PFAM = PF01625)' T '29.4' 'protein.postranslational modification' 'niben101scf04624_47620-53578' '(gnl|cdd|35830 : 596.0) no description available & (at3g52890 : 558.0) KCBP-interacting protein kinase interacts specifically with the tail region of KCBP; KCBP-interacting protein kinase (KIPK); FUNCTIONS IN: protein binding, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G36350.1); Has 124693 Blast hits to 89359 proteins in 3581 species: Archae - 52; Bacteria - 15752; Metazoa - 49633; Fungi - 14477; Plants - 20322; Viruses - 421; Other Eukaryotes - 24036 (source: NCBI BLink). & (p47997|g11a_orysa : 490.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 161.0) no description available & (reliability: 1116.0) & (original description: Putative Adi3, Description = Protein kinase G11A, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf04627_653286-667622' '(gnl|cdd|35887 : 615.0) no description available & (at5g67380 : 605.0) casein kinase II catalytic subunit alpha; casein kinase alpha 1 (CKA1); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase II, alpha chain 2 (TAIR:AT3G50000.1); Has 73369 Blast hits to 72658 proteins in 2362 species: Archae - 60; Bacteria - 7223; Metazoa - 28693; Fungi - 10783; Plants - 10981; Viruses - 246; Other Eukaryotes - 15383 (source: NCBI BLink). & (p28523|csk2a_maize : 583.0) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II) (CK2-alpha) - Zea mays (Maize) & (gnl|cdd|84488 : 202.0) no description available & (reliability: 1210.0) & (original description: Putative CKA1, Description = Casein kinase II subunit alpha-1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf04633_102750-108226' '(at1g09840 : 131.0) shaggy-like protein kinase 41 (SK41); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: shaggy-like kinase 42 (TAIR:AT1G57870.2); Has 102931 Blast hits to 101896 proteins in 3684 species: Archae - 93; Bacteria - 10743; Metazoa - 37496; Fungi - 11700; Plants - 24573; Viruses - 362; Other Eukaryotes - 17964 (source: NCBI BLink). & (p51139|msk3_medsa : 130.0) Glycogen synthase kinase-3 homolog MsK-3 (EC 2.7.11.1) - Medicago sativa (Alfalfa) & (gnl|cdd|35877 : 114.0) no description available & (reliability: 262.0) & (original description: Putative shag, Description = Shaggy-related protein kinase theta, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben101scf04638_203598-210065' '(at5g14640 : 743.0) shaggy-like kinase 13 (SK13); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: response to salt stress, hyperosmotic response; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: shaggy-related kinase 11 (TAIR:AT5G26751.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q40518|msk1_tobac : 726.0) Shaggy-related protein kinase NtK-1 (EC 2.7.11.1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35877 : 585.0) no description available & (gnl|cdd|29142 : 232.0) no description available & (reliability: 1486.0) & (original description: Putative ASK5, Description = Shaggy-related protein kinase epsilon, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf04653_701617-707029' '(at4g24740 : 732.0) a LAMMER-type protein kinase that co-precipitates with serine/arginine-rich (SR) proteins in vitro, interaction modulated by phosphorylation of the proteins.; FUS3-complementing gene 2 (FC2); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: FUS3-complementing gene 1 (TAIR:AT3G53570.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35890 : 505.0) no description available & (gnl|cdd|47550 : 194.0) no description available & (p23111|cdc2_maize : 108.0) Cell division control protein 2 homolog (EC 2.7.11.22) (EC 2.7.11.23) (p34cdc2) - Zea mays (Maize) & (reliability: 1464.0) & (original description: Putative AFC2, Description = Serine/threonine-protein kinase AFC2, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf04653_722707-725663' '(at4g24730 : 425.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transporter, high affinity nitrate, Nar2 (InterPro:IPR016605); BEST Arabidopsis thaliana protein match is: nitrate transmembrane transporters (TAIR:AT5G50200.1). & (reliability: 850.0) & (original description: Putative adprm, Description = Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'niben101scf04675_937304-947332' '(at5g26010 : 282.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G32950.1); Has 6065 Blast hits to 6055 proteins in 312 species: Archae - 2; Bacteria - 39; Metazoa - 1411; Fungi - 761; Plants - 2573; Viruses - 5; Other Eukaryotes - 1274 (source: NCBI BLink). & (gnl|cdd|29062 : 192.0) no description available & (gnl|cdd|35917 : 190.0) no description available & (reliability: 564.0) & (original description: Putative At4g32950, Description = Probable protein phosphatase 2C 61, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf04675_937918-940752' '(at5g26010 : 277.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G32950.1); Has 6065 Blast hits to 6055 proteins in 312 species: Archae - 2; Bacteria - 39; Metazoa - 1411; Fungi - 761; Plants - 2573; Viruses - 5; Other Eukaryotes - 1274 (source: NCBI BLink). & (gnl|cdd|29062 : 193.0) no description available & (gnl|cdd|35917 : 191.0) no description available & (reliability: 554.0) & (original description: Putative Os02g0224100, Description = Probable protein phosphatase 2C 12, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf04686_80564-87074' '(at5g10480 : 303.0) Protein tyrosine phosphatase-like involved in cell division and differentiation. Interacts with CDKA;1 only in its phosphorylated form, preventing dephosphorylation. Overexpression slowed down cell division in suspension cell cultures at the G2-to-M transition and early mitosis and inhibited Arabidopsis seedling growth. Localized in the cytoplasm of dividing cells but moved into the nucleus upon cell differentiation. Based on complementation of yeast mutant PAS2 has acyl-CoA dehydratase activity. It interacts with CER10, a component of the microsomal fatty acid elongase complex, suggesting a role in synthesis of VLCFAs (very long chain fatty acids).; PASTICCINO 2 (PAS2); CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase-like, PTPLA (InterPro:IPR007482); BEST Arabidopsis thaliana protein match is: Protein-tyrosine phosphatase-like, PTPLA (TAIR:AT5G59770.1). & (gnl|cdd|38397 : 185.0) no description available & (gnl|cdd|67978 : 167.0) no description available & (reliability: 606.0) & (original description: Putative PAS2, Description = Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2, PFAM = PF04387)' T '29.4' 'protein.postranslational modification' 'niben101scf04699_74005-81773' '(at3g44200 : 716.0) Encodes AtNek5, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.Interacts physically with plant kinesins ARK1 and ARK2. Mutants show defects in root epidermal cell morphology, trichome branching and other epidermal cell abnormalities suggesting a rol e in epidermal cell differentiation. NEK6 co-localizes with cortical microtubules.; "NIMA (never in mitosis, gene A)-related 6" (NEK6); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: microtubule-based process, epidermal cell differentiation; LOCATED IN: cortical microtubule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NIMA-related serine/threonine kinase 1 (TAIR:AT1G54510.3); Has 127749 Blast hits to 124714 proteins in 4408 species: Archae - 106; Bacteria - 14910; Metazoa - 47444; Fungi - 12949; Plants - 30417; Viruses - 519; Other Eukaryotes - 21404 (source: NCBI BLink). & (gnl|cdd|35809 : 388.0) no description available & (gnl|cdd|29142 : 261.0) no description available & (q6x4a2|cipk1_orysa : 127.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1432.0) & (original description: Putative NEK5, Description = Serine/threonine-protein kinase Nek5, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf04706_38728-90934' '(at5g10480 : 110.0) Protein tyrosine phosphatase-like involved in cell division and differentiation. Interacts with CDKA;1 only in its phosphorylated form, preventing dephosphorylation. Overexpression slowed down cell division in suspension cell cultures at the G2-to-M transition and early mitosis and inhibited Arabidopsis seedling growth. Localized in the cytoplasm of dividing cells but moved into the nucleus upon cell differentiation. Based on complementation of yeast mutant PAS2 has acyl-CoA dehydratase activity. It interacts with CER10, a component of the microsomal fatty acid elongase complex, suggesting a role in synthesis of VLCFAs (very long chain fatty acids).; PASTICCINO 2 (PAS2); CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase-like, PTPLA (InterPro:IPR007482); BEST Arabidopsis thaliana protein match is: Protein-tyrosine phosphatase-like, PTPLA (TAIR:AT5G59770.1). & (reliability: 220.0) & (original description: Putative PAS2, Description = 3-hydroxyacyl-CoA dehydratase PASTICCINO 2A, PFAM = PF04387)' T '29.4' 'protein.postranslational modification' 'niben101scf04706_88054-93764' '(at5g10480 : 259.0) Protein tyrosine phosphatase-like involved in cell division and differentiation. Interacts with CDKA;1 only in its phosphorylated form, preventing dephosphorylation. Overexpression slowed down cell division in suspension cell cultures at the G2-to-M transition and early mitosis and inhibited Arabidopsis seedling growth. Localized in the cytoplasm of dividing cells but moved into the nucleus upon cell differentiation. Based on complementation of yeast mutant PAS2 has acyl-CoA dehydratase activity. It interacts with CER10, a component of the microsomal fatty acid elongase complex, suggesting a role in synthesis of VLCFAs (very long chain fatty acids).; PASTICCINO 2 (PAS2); CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase-like, PTPLA (InterPro:IPR007482); BEST Arabidopsis thaliana protein match is: Protein-tyrosine phosphatase-like, PTPLA (TAIR:AT5G59770.1). & (gnl|cdd|67978 : 171.0) no description available & (gnl|cdd|38397 : 165.0) no description available & (reliability: 518.0) & (original description: Putative BnaA03g02950D, Description = BnaA03g02950D protein, PFAM = PF04387)' T '29.4' 'protein.postranslational modification' 'niben101scf04732_161388-262404' '(at1g63500 : 692.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G41260.1); Has 34543 Blast hits to 34010 proteins in 1386 species: Archae - 8; Bacteria - 2627; Metazoa - 7585; Fungi - 183; Plants - 22470; Viruses - 98; Other Eukaryotes - 1572 (source: NCBI BLink). & (gnl|cdd|36401 : 189.0) no description available & (gnl|cdd|47549 : 94.1) no description available & (o24585|cri4_maize : 92.8) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 1384.0) & (original description: Putative BSK2, Description = Kinase family protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf04732_249930-254569' '(at1g63500 : 167.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G41260.1); Has 34543 Blast hits to 34010 proteins in 1386 species: Archae - 8; Bacteria - 2627; Metazoa - 7585; Fungi - 183; Plants - 22470; Viruses - 98; Other Eukaryotes - 1572 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative BSK2, Description = Putative serine/threonine-protein kinase, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben101scf04741_396660-403719' '(at1g53670 : 243.0) methionine sulfoxide reductase B 1 (MSRB1); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B3 (TAIR:AT4G04800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80581 : 215.0) no description available & (gnl|cdd|36074 : 189.0) no description available & (reliability: 486.0) & (original description: Putative MSRB1, Description = Peptide methionine sulfoxide reductase B1, chloroplastic, PFAM = PF01641)' T '29.4' 'protein.postranslational modification' 'niben101scf04754_443171-446195' '(gnl|cdd|35804 : 357.0) no description available & (at3g18750 : 301.0) Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.; with no lysine (K) kinase 6 (WNK6); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G49160.2). & (gnl|cdd|29142 : 170.0) no description available & (reliability: 602.0) & (original description: Putative oipk, Description = WNK kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf04786_220558-227655' '(at4g32250 : 788.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: protein kinases;ubiquitin-protein ligases (TAIR:AT5G13530.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35419 : 154.0) no description available & (gnl|cdd|29142 : 135.0) no description available & (reliability: 1576.0) & (original description: Putative BnaC01g06260D, Description = BnaC01g06260D protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf04801_207910-214728' '(at5g50000 : 652.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G01490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35413 : 314.0) no description available & (gnl|cdd|87344 : 223.0) no description available & (q8l4h4|nork_medtr : 96.3) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1304.0) & (original description: Putative DR01, Description = Protein kinase family protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf04802_94948-115932' '(at4g24740 : 670.0) a LAMMER-type protein kinase that co-precipitates with serine/arginine-rich (SR) proteins in vitro, interaction modulated by phosphorylation of the proteins.; FUS3-complementing gene 2 (FC2); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: FUS3-complementing gene 1 (TAIR:AT3G53570.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35890 : 505.0) no description available & (gnl|cdd|47550 : 196.0) no description available & (p23111|cdc2_maize : 117.0) Cell division control protein 2 homolog (EC 2.7.11.22) (EC 2.7.11.23) (p34cdc2) - Zea mays (Maize) & (reliability: 1340.0) & (original description: Putative v1g235840, Description = Predicted protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf04817_74577-79875' '(at4g21390 : 830.0) B120; FUNCTIONS IN: protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61610.1); Has 119638 Blast hits to 117946 proteins in 4361 species: Archae - 104; Bacteria - 13356; Metazoa - 43759; Fungi - 9937; Plants - 34742; Viruses - 415; Other Eukaryotes - 17325 (source: NCBI BLink). & (gnl|cdd|36401 : 326.0) no description available & (p17840|slsg3_braol : 226.0) S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage) & (gnl|cdd|47549 : 176.0) no description available & (reliability: 1568.0) & (original description: Putative B120, Description = G-type lectin S-receptor-like serine/threonine-protein kinase B120, PFAM = PF07714;PF00954;PF08276;PF01453;PF11883)' T '29.4' 'protein.postranslational modification' 'niben101scf04829_56404-62404' '(at4g28880 : 548.0) casein kinase I-like 3 (ckl3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase I-like 4 (TAIR:AT4G28860.1); Has 64022 Blast hits to 63665 proteins in 2312 species: Archae - 48; Bacteria - 11126; Metazoa - 24220; Fungi - 7316; Plants - 9570; Viruses - 322; Other Eukaryotes - 11420 (source: NCBI BLink). & (gnl|cdd|36378 : 449.0) no description available & (gnl|cdd|29142 : 143.0) no description available & (reliability: 1096.0) & (original description: Putative CKL3, Description = Protein CASEIN KINASE I-LIKE 3, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf04840_88070-93996' '(at1g60940 : 585.0) encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress.; SNF1-related protein kinase 2.10 (SNRK2.10); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G10940.1); Has 111565 Blast hits to 109717 proteins in 3008 species: Archae - 112; Bacteria - 13169; Metazoa - 40737; Fungi - 12092; Plants - 25831; Viruses - 494; Other Eukaryotes - 19130 (source: NCBI BLink). & (q7xqp4|sapk7_orysa : 575.0) Serine/threonine-protein kinase SAPK7 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 7) - Oryza sativa (Rice) & (gnl|cdd|35803 : 307.0) no description available & (gnl|cdd|29142 : 267.0) no description available & (reliability: 1170.0) & (original description: Putative SRK2B, Description = Serine/threonine-protein kinase SRK2B, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf04864_398180-404313' '(at3g56760 : 597.0) Protein kinase superfamily protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CDPK-related kinase 1 (TAIR:AT2G41140.1); Has 115971 Blast hits to 114244 proteins in 3013 species: Archae - 152; Bacteria - 14469; Metazoa - 43130; Fungi - 12702; Plants - 24192; Viruses - 490; Other Eukaryotes - 20836 (source: NCBI BLink). & (p53681|crk_dauca : 518.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 333.0) no description available & (gnl|cdd|29142 : 262.0) no description available & (reliability: 1174.0) & (original description: Putative crk2, Description = CDPK-related protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf04864_401795-405525' '(at2g41140 : 362.0) Encodes CDPK-related kinase 1 (CRK1).; CDPK-related kinase 1 (CRK1); FUNCTIONS IN: calcium-dependent protein serine/threonine phosphatase activity, calmodulin-dependent protein kinase activity, kinase activity, calcium ion binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G56760.1); Has 116311 Blast hits to 114570 proteins in 3026 species: Archae - 154; Bacteria - 14640; Metazoa - 43033; Fungi - 12673; Plants - 24419; Viruses - 507; Other Eukaryotes - 20885 (source: NCBI BLink). & (p53681|crk_dauca : 300.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 130.0) no description available & (gnl|cdd|29142 : 87.2) no description available & (reliability: 724.0) & (original description: Putative crk2, Description = CDPK-related protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf04878_174610-182065' '(at1g09600 : 700.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G57700.1); Has 123498 Blast hits to 122030 proteins in 4353 species: Archae - 93; Bacteria - 13546; Metazoa - 45885; Fungi - 12568; Plants - 30937; Viruses - 467; Other Eukaryotes - 20002 (source: NCBI BLink). & (gnl|cdd|35820 : 654.0) no description available & (gnl|cdd|29142 : 264.0) no description available & (q05006|cdc22_medsa : 211.0) Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Medicago sativa (Alfalfa) & (reliability: 1400.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf04905_259239-334198' '(at1g67580 : 575.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G63370.4); Has 126651 Blast hits to 124962 proteins in 4234 species: Archae - 92; Bacteria - 13816; Metazoa - 47970; Fungi - 13169; Plants - 29930; Viruses - 638; Other Eukaryotes - 21036 (source: NCBI BLink). & (gnl|cdd|35882 : 454.0) no description available & (gnl|cdd|29142 : 265.0) no description available & (p29618|cdc21_orysa : 263.0) Cell division control protein 2 homolog 1 (EC 2.7.11.22) - Oryza sativa (Rice) & (reliability: 1150.0) & (original description: Putative CDK1, Description = Cyclin-dependent kinase 11B, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf04933_43722-74842' '(at3g58640 : 1123.0) Mitogen activated protein kinase kinase kinase-related; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G31010.2); Has 125614 Blast hits to 123525 proteins in 4988 species: Archae - 158; Bacteria - 13731; Metazoa - 47851; Fungi - 11388; Plants - 32996; Viruses - 518; Other Eukaryotes - 18972 (source: NCBI BLink). & (gnl|cdd|35413 : 283.0) no description available & (gnl|cdd|87344 : 234.0) no description available & (q8l4h4|nork_medtr : 107.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 2246.0) & (original description: Putative drkC, Description = Serine/threonine-protein kinase CTR1, PFAM = PF07714;PF14381)' T '29.4' 'protein.postranslational modification' 'niben101scf04943_209401-215921' '(at1g68410 : 644.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G09160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35917 : 180.0) no description available & (gnl|cdd|29062 : 175.0) no description available & (reliability: 1288.0) & (original description: Putative At1g68410, Description = Probable protein phosphatase 2C 15, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf04950_125329-133370' '(at2g22560 : 574.0) Kinase interacting (KIP1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT5G10500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71206 : 125.0) no description available & (reliability: 1100.0) & (original description: Putative KIP1, Description = Kinase interacting family protein, putative, PFAM = PF07765)' T '29.4' 'protein.postranslational modification' 'niben101scf04953_897783-901930' '(at3g53380 : 868.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: carbohydrate binding, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Legume lectin, beta chain, Mn/Ca-binding site (InterPro:IPR019825); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G03140.1); Has 123161 Blast hits to 121629 proteins in 4558 species: Archae - 118; Bacteria - 14046; Metazoa - 45147; Fungi - 10620; Plants - 34718; Viruses - 434; Other Eukaryotes - 18078 (source: NCBI BLink). & (gnl|cdd|36401 : 322.0) no description available & (gnl|cdd|84552 : 208.0) no description available & (q8lkz1|nork_pea : 196.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 1736.0) & (original description: Putative LECRK81, Description = L-type lectin-domain containing receptor kinase VIII.1, PFAM = PF00069;PF00139)' T '29.4' 'protein.postranslational modification' 'niben101scf05028_145170-156727' '(gnl|cdd|37752 : 336.0) no description available & (at3g60340 : 335.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: palmitoyl-(protein) hydrolase activity; INVOLVED IN: protein modification process; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Palmitoyl protein thioesterase (InterPro:IPR002472); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G47330.1); Has 611 Blast hits to 607 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 315; Fungi - 98; Plants - 140; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|65841 : 145.0) no description available & (reliability: 606.0) & (original description: Putative BnaAnng23510D, Description = BnaAnng23510D protein, PFAM = PF02089)' T '29.4' 'protein.postranslational modification' 'niben101scf05080_265696-283925' '(at5g55260 : 634.0) Encodes a protein with similarity to the catalytic subunit of the mammalian PPX protein phospatase.; protein phosphatase X 2 (PPX2); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase X 1 (TAIR:AT4G26720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35593 : 585.0) no description available & (q9xgh7|pp2a_tobac : 452.0) Serine/threonine-protein phosphatase PP2A catalytic subunit (EC 3.1.3.16) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29063 : 373.0) no description available & (reliability: 1268.0) & (original description: Putative PPX1, Description = Serine/threonine-protein phosphatase PP-X isozyme 1, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'niben101scf05118_545823-556535' '(at1g14000 : 303.0) Encodes a protein with similarity to members of the C1 subgroup of MAP kinase kinase kinases. Interacts physically with the receptor kinase BRL2/VH1 and appears to be involved in auxin and brassinosteriod signaling.; VH1-interacting kinase (VIK); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G58760.1); Has 139285 Blast hits to 133759 proteins in 5118 species: Archae - 180; Bacteria - 15286; Metazoa - 53967; Fungi - 12530; Plants - 33711; Viruses - 527; Other Eukaryotes - 23084 (source: NCBI BLink). & (gnl|cdd|35413 : 233.0) no description available & (gnl|cdd|29142 : 214.0) no description available & (q8l4h4|nork_medtr : 117.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 606.0) & (original description: Putative Sb02g040300, Description = Putative uncharacterized protein Sb02g040300, PFAM = PF07714;PF12796)' T '29.4' 'protein.postranslational modification' 'niben101scf05133_318788-328942' '(at1g03590 : 606.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G03415.2); Has 5799 Blast hits to 5797 proteins in 294 species: Archae - 0; Bacteria - 4; Metazoa - 1418; Fungi - 691; Plants - 2505; Viruses - 5; Other Eukaryotes - 1176 (source: NCBI BLink). & (gnl|cdd|35917 : 208.0) no description available & (gnl|cdd|29062 : 193.0) no description available & (reliability: 1212.0) & (original description: Putative F9H3, Description = Phosphatase 2C family protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf05135_38888-46281' '(at3g19420 : 685.0) PTEN 2 (PEN2); FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, protein tyrosine/serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, dephosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Phosphatase tensin type (InterPro:IPR014019), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Tensin phosphatase, C2 domain (InterPro:IPR014020); BEST Arabidopsis thaliana protein match is: PTEN 3 (TAIR:AT3G50110.1); Has 4829 Blast hits to 1781 proteins in 265 species: Archae - 0; Bacteria - 174; Metazoa - 864; Fungi - 554; Plants - 143; Viruses - 4; Other Eukaryotes - 3090 (source: NCBI BLink). & (gnl|cdd|37494 : 324.0) no description available & (reliability: 1370.0) & (original description: Putative PTEN2A, Description = Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN2A, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben101scf05137_271846-281292' '(at2g37840 : 691.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, putative (InterPro:IPR020655), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G53930.2); Has 51534 Blast hits to 51036 proteins in 1321 species: Archae - 36; Bacteria - 3205; Metazoa - 22459; Fungi - 6825; Plants - 7556; Viruses - 105; Other Eukaryotes - 11348 (source: NCBI BLink). & (gnl|cdd|35815 : 347.0) no description available & (gnl|cdd|47550 : 288.0) no description available & (q75v57|sapk9_orysa : 136.0) Serine/threonine-protein kinase SAPK9 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 9) - Oryza sativa (Rice) & (reliability: 1382.0) & (original description: Putative ATG1C, Description = Serine/threonine-protein kinase ATG1c, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf05152_10507-13929' '(at3g25250 : 439.0) Arabidopsis protein kinase; AGC2-1; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root, stamen, pollen tube; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT4G13000.1); Has 87313 Blast hits to 84259 proteins in 2947 species: Archae - 68; Bacteria - 13079; Metazoa - 33183; Fungi - 11494; Plants - 12113; Viruses - 235; Other Eukaryotes - 17141 (source: NCBI BLink). & (gnl|cdd|35830 : 395.0) no description available & (p47997|g11a_orysa : 210.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 134.0) no description available & (reliability: 878.0) & (original description: Putative OXI1, Description = Serine/threonine-protein kinase OXI1, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf05171_75858-81672' '(at4g00720 : 741.0) Encodes ASKtheta, a group III Arabidopsis GSK3/shaggy-like kinase. Functions in the brassinosteroid signalling pathway.; shaggy-like protein kinase 32 (SK32); FUNCTIONS IN: kinase activity; INVOLVED IN: response to brassinosteroid stimulus; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: shaggy-like kinase 13 (TAIR:AT5G14640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o04160|ksgt_brana : 707.0) Shaggy-related protein kinase theta (EC 2.7.11.1) (ASK-theta) - Brassica napus (Rape) & (gnl|cdd|35877 : 577.0) no description available & (gnl|cdd|29142 : 237.0) no description available & (reliability: 1482.0) & (original description: Putative ASK8, Description = Shaggy-related protein kinase theta, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf05177_219832-222616' '(at5g08335 : 261.0) Encodes an isoprenyl cysteine methylatransferase (ICMT) involved in the post-translational processing of proteins that have a C-terminal CaaX box. This protein appears to have higher catalytic activity and a higher transcript expression level than the other ICMT present in Arabidopsis (At5g23320). Analysis of ICMT RNAi lines suggests that this protein is involved in flower and stem development.; ATSTE14B; CONTAINS InterPro DOMAIN/s: Isoprenylcysteine carboxyl methyltransferase (InterPro:IPR007269); BEST Arabidopsis thaliana protein match is: homolog of yeast STE14 A (TAIR:AT5G23320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37839 : 198.0) no description available & (gnl|cdd|32203 : 92.8) no description available & (reliability: 522.0) & (original description: Putative ICMTB, Description = Protein-S-isoprenylcysteine O-methyltransferase B, PFAM = PF04140)' T '29.4' 'protein.postranslational modification' 'niben101scf05178_102956-110035' '(at3g17090 : 491.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: endomembrane system, protein serine/threonine phosphatase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G38520.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35919 : 369.0) no description available & (gnl|cdd|47660 : 160.0) no description available & (reliability: 982.0) & (original description: Putative pp2C2, Description = Serine/threonine phosphatase family, 2C domain protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf05188_260763-263589' '(at5g08335 : 268.0) Encodes an isoprenyl cysteine methylatransferase (ICMT) involved in the post-translational processing of proteins that have a C-terminal CaaX box. This protein appears to have higher catalytic activity and a higher transcript expression level than the other ICMT present in Arabidopsis (At5g23320). Analysis of ICMT RNAi lines suggests that this protein is involved in flower and stem development.; ATSTE14B; CONTAINS InterPro DOMAIN/s: Isoprenylcysteine carboxyl methyltransferase (InterPro:IPR007269); BEST Arabidopsis thaliana protein match is: homolog of yeast STE14 A (TAIR:AT5G23320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37839 : 204.0) no description available & (gnl|cdd|32203 : 95.9) no description available & (reliability: 536.0) & (original description: Putative ICMTB, Description = Protein-S-isoprenylcysteine O-methyltransferase B, PFAM = PF04140)' T '29.4' 'protein.postranslational modification' 'niben101scf05201_777197-787145' '(at1g63500 : 810.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G41260.1); Has 34543 Blast hits to 34010 proteins in 1386 species: Archae - 8; Bacteria - 2627; Metazoa - 7585; Fungi - 183; Plants - 22470; Viruses - 98; Other Eukaryotes - 1572 (source: NCBI BLink). & (gnl|cdd|36401 : 200.0) no description available & (o24585|cri4_maize : 104.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|88314 : 104.0) no description available & (reliability: 1620.0) & (original description: Putative At5g41260, Description = Probable serine/threonine-protein kinase At5g41260, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf05222_512705-520813' '(at3g09970 : 480.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT3G09960.1); Has 1009 Blast hits to 1009 proteins in 371 species: Archae - 12; Bacteria - 594; Metazoa - 24; Fungi - 11; Plants - 146; Viruses - 12; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|35595 : 112.0) no description available & (reliability: 960.0) & (original description: Putative BnaC05g43030D, Description = BnaC05g43030D protein, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'niben101scf05231_47778-52110' '(at3g16560 : 454.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: pol-like 5 (TAIR:AT1G07630.1); Has 5306 Blast hits to 5268 proteins in 332 species: Archae - 0; Bacteria - 114; Metazoa - 1381; Fungi - 595; Plants - 2295; Viruses - 5; Other Eukaryotes - 916 (source: NCBI BLink). & (gnl|cdd|35919 : 295.0) no description available & (gnl|cdd|29062 : 148.0) no description available & (reliability: 908.0) & (original description: Putative At3g16560, Description = Probable protein phosphatase 2C 40, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf05234_76441-106600' '(gnl|cdd|35419 : 221.0) no description available & (at3g50310 : 189.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 20 (MAPKKK20); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 19 (TAIR:AT5G67080.1); Has 114114 Blast hits to 112767 proteins in 3610 species: Archae - 125; Bacteria - 11707; Metazoa - 43224; Fungi - 11427; Plants - 28864; Viruses - 487; Other Eukaryotes - 18280 (source: NCBI BLink). & (gnl|cdd|29142 : 185.0) no description available & (p28582|cdpk_dauca : 94.4) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 378.0) & (original description: Putative MAPKKK19, Description = Mitogen-activated protein kinase kinase kinase A, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf05234_125119-128165' '(gnl|cdd|35419 : 220.0) no description available & (at3g50310 : 189.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 20 (MAPKKK20); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 19 (TAIR:AT5G67080.1); Has 114114 Blast hits to 112767 proteins in 3610 species: Archae - 125; Bacteria - 11707; Metazoa - 43224; Fungi - 11427; Plants - 28864; Viruses - 487; Other Eukaryotes - 18280 (source: NCBI BLink). & (gnl|cdd|29142 : 184.0) no description available & (p28582|cdpk_dauca : 93.2) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 378.0) & (original description: Putative MAPKKK19, Description = Mitogen-activated protein kinase kinase kinase 3, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf05241_281083-289217' '(at1g16220 : 536.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G79630.1); Has 5547 Blast hits to 5545 proteins in 292 species: Archae - 2; Bacteria - 12; Metazoa - 1332; Fungi - 643; Plants - 2421; Viruses - 5; Other Eukaryotes - 1132 (source: NCBI BLink). & (gnl|cdd|35917 : 206.0) no description available & (gnl|cdd|29062 : 189.0) no description available & (reliability: 1072.0) & (original description: Putative At1g16220, Description = Probable protein phosphatase 2C 6, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf05262_45445-53787' '(at5g53340 : 469.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G32120.1); Has 782 Blast hits to 773 proteins in 80 species: Archae - 0; Bacteria - 0; Metazoa - 225; Fungi - 0; Plants - 529; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|37499 : 298.0) no description available & (gnl|cdd|85659 : 107.0) no description available & (reliability: 938.0) & (original description: Putative HPTG1, Description = Hydroxyproline O-galactosyltransferase HPGT1, PFAM = PF13334;PF01762)' T '29.4' 'protein.postranslational modification' 'niben101scf05271_29209-36038' '(at5g47750 : 659.0) D6 protein kinase like 2 (D6PKL2); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleolus, nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 1 (TAIR:AT4G26610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p47997|g11a_orysa : 593.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|35830 : 536.0) no description available & (gnl|cdd|47550 : 122.0) no description available & (reliability: 1318.0) & (original description: Putative ABR, Description = Protein kinase G11A, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf05278_595119-601102' '(at2g30360 : 464.0) Encodes a SOS2-like protein kinase that is a member of the CBL-interacting protein kinase family.Loss of function mutants show a decrease in sensitivity to high pH.Phosphorylates AHA2, a plasma membrane H+ ATPase.This phosphorylation appears to regulate the activity of the proton transporter.; SOS3-interacting protein 4 (SIP4); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: serine/threonine protein kinase 1 (TAIR:AT5G01820.1); Has 132389 Blast hits to 130226 proteins in 4650 species: Archae - 184; Bacteria - 15582; Metazoa - 48520; Fungi - 13393; Plants - 32054; Viruses - 541; Other Eukaryotes - 22115 (source: NCBI BLink). & (gnl|cdd|35803 : 333.0) no description available & (q6x4a2|cipk1_orysa : 325.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|29142 : 283.0) no description available & (reliability: 928.0) & (original description: Putative CIPK11, Description = CBL-interacting serine/threonine-protein kinase 11, PFAM = PF00069;PF03822)' T '29.4' 'protein.postranslational modification' 'niben101scf05295_510373-515834' '(at4g21380 : 611.0) encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels.; receptor kinase 3 (RK3); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), S-locus, receptor kinase (InterPro:IPR022126); BEST Arabidopsis thaliana protein match is: receptor kinase 2 (TAIR:AT1G65800.1); Has 120297 Blast hits to 118488 proteins in 4631 species: Archae - 97; Bacteria - 13304; Metazoa - 44101; Fungi - 10092; Plants - 34714; Viruses - 410; Other Eukaryotes - 17579 (source: NCBI BLink). & (gnl|cdd|36401 : 335.0) no description available & (p17801|kpro_maize : 265.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 174.0) no description available & (reliability: 1158.0) & (original description: Putative At4g03230, Description = G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230, PFAM = PF00954;PF01453;PF08276;PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf05299_39171-46066' '(at4g21390 : 334.0) B120; FUNCTIONS IN: protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61610.1); Has 119638 Blast hits to 117946 proteins in 4361 species: Archae - 104; Bacteria - 13356; Metazoa - 43759; Fungi - 9937; Plants - 34742; Viruses - 415; Other Eukaryotes - 17325 (source: NCBI BLink). & (gnl|cdd|36401 : 334.0) no description available & (q8lkz1|nork_pea : 196.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 175.0) no description available & (reliability: 668.0) & (original description: Putative BnaA07g38960D, Description = BnaA07g38960D protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf05301_14825-38836' '(at4g03080 : 1403.0) BRI1 suppressor 1 (BSU1)-like 1 (BSL1); FUNCTIONS IN: protein binding, protein serine/threonine phosphatase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Metallophosphoesterase (InterPro:IPR004843), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: Serine/threonine protein phosphatase family protein (TAIR:AT1G03445.1); Has 11450 Blast hits to 9180 proteins in 548 species: Archae - 80; Bacteria - 322; Metazoa - 3883; Fungi - 1977; Plants - 2720; Viruses - 6; Other Eukaryotes - 2462 (source: NCBI BLink). & (q60ex6|bsl1_orysa : 1298.0) Serine/threonine protein phosphatase BSL1 homolog (EC 3.1.3.16) (BSU1-like protein 1 homolog) - Oryza sativa (Rice) & (gnl|cdd|35595 : 377.0) no description available & (gnl|cdd|29063 : 324.0) no description available & (reliability: 2806.0) & (original description: Putative BSL1, Description = Serine/threonine-protein phosphatase BSL1, PFAM = PF00149;PF13854)' T '29.4' 'protein.postranslational modification' 'niben101scf05372_98262-102352' '(o04857|pp12_tobac : 652.0) Serine/threonine-protein phosphatase PP1 isozyme 2 (EC 3.1.3.16) - Nicotiana tabacum (Common tobacco) & (at5g59160 : 575.0) Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers.; type one serine/threonine protein phosphatase 2 (TOPP2); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: type one serine/threonine protein phosphatase 5 (TAIR:AT3G46820.1); Has 7217 Blast hits to 7021 proteins in 626 species: Archae - 78; Bacteria - 572; Metazoa - 2410; Fungi - 1415; Plants - 989; Viruses - 12; Other Eukaryotes - 1741 (source: NCBI BLink). & (gnl|cdd|35595 : 477.0) no description available & (gnl|cdd|29063 : 411.0) no description available & (reliability: 1150.0) & (original description: Putative NPP1, Description = Serine/threonine-protein phosphatase PP1 isozyme 1, PFAM = PF00149;PF16891)' T '29.4' 'protein.postranslational modification' 'niben101scf05405_21370-29018' '(at3g12620 : 600.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G55050.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35919 : 398.0) no description available & (gnl|cdd|29062 : 180.0) no description available & (reliability: 1200.0) & (original description: Putative pp2C2, Description = Serine/threonine phosphatase family, 2C domain protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf05409_91398-102289' '(at1g29370 : 404.0) Kinase-related protein of unknown function (DUF1296); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1296 (InterPro:IPR009719); BEST Arabidopsis thaliana protein match is: Kinase-related protein of unknown function (DUF1296) (TAIR:AT1G29350.1); Has 14234 Blast hits to 8102 proteins in 480 species: Archae - 0; Bacteria - 599; Metazoa - 5712; Fungi - 1715; Plants - 1064; Viruses - 60; Other Eukaryotes - 5084 (source: NCBI BLink). & (gnl|cdd|70439 : 105.0) no description available & (reliability: 808.0) & (original description: Putative At1g29350, Description = Kinase-related protein, PFAM = PF06972)' T '29.4' 'protein.postranslational modification' 'niben101scf05437_417076-420878' '(at5g50200 : 163.0) Wound-responsive gene 3 (WR3). Encodes a high-affinity nitrate transporter. Up-regulated by nitrate. Involved in jasmonic acid-independent wound signal transduction.; WOUND-RESPONSIVE 3 (WR3); FUNCTIONS IN: nitrate transmembrane transporter activity; INVOLVED IN: nitrate transport, response to nitrate, response to wounding; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Transporter, high affinity nitrate, Nar2 (InterPro:IPR016605); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT4G24730.4); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative upa10, Description = Component of high affinity nitrate transporter, PFAM = PF16974)' T '29.4' 'protein.postranslational modification' 'niben101scf05437_442204-445177' '(at4g24730 : 164.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transporter, high affinity nitrate, Nar2 (InterPro:IPR016605); BEST Arabidopsis thaliana protein match is: nitrate transmembrane transporters (TAIR:AT5G50200.1). & (reliability: 328.0) & (original description: Putative upa10, Description = Component of high affinity nitrate transporter, PFAM = PF16974)' T '29.4' 'protein.postranslational modification' 'niben101scf05437_444987-447943' '(at4g24730 : 459.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transporter, high affinity nitrate, Nar2 (InterPro:IPR016605); BEST Arabidopsis thaliana protein match is: nitrate transmembrane transporters (TAIR:AT5G50200.1). & (reliability: 918.0) & (original description: Putative Os07g0688000, Description = Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'niben101scf05437_506648-511556' '(at4g24740 : 739.0) a LAMMER-type protein kinase that co-precipitates with serine/arginine-rich (SR) proteins in vitro, interaction modulated by phosphorylation of the proteins.; FUS3-complementing gene 2 (FC2); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: FUS3-complementing gene 1 (TAIR:AT3G53570.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35890 : 521.0) no description available & (gnl|cdd|47550 : 198.0) no description available & (p23111|cdc2_maize : 109.0) Cell division control protein 2 homolog (EC 2.7.11.22) (EC 2.7.11.23) (p34cdc2) - Zea mays (Maize) & (reliability: 1478.0) & (original description: Putative AFC2, Description = Serine/threonine-protein kinase AFC2, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf05437_653547-660365' '(at5g50240 : 360.0) L-isoaspartyl methyltransferase 2 (PIMT2)gene, alternatively spliced.; protein-l-isoaspartate methyltransferase 2 (PIMT2); FUNCTIONS IN: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity; INVOLVED IN: protein modification process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (InterPro:IPR000682); BEST Arabidopsis thaliana protein match is: protein-l-isoaspartate methyltransferase 1 (TAIR:AT3G48330.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43209|pimt_wheat : 342.0) Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) (Protein-beta-aspartate methyltransferase) (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase) - Triticum aestivum (Wheat) & (gnl|cdd|85261 : 288.0) no description available & (gnl|cdd|36874 : 254.0) no description available & (reliability: 720.0) & (original description: Putative PIMT1, Description = Protein-L-isoaspartate O-methyltransferase 1, PFAM = PF01135)' T '29.4' 'protein.postranslational modification' 'niben101scf05467_69960-84296' '(at2g42810 : 892.0) Encodes a phytochrome-specific type 5 serine/threonine protein phosphatase. It dephosphorylates active Pfr-phytochromes. Controls light signal flux by enhancing phytochrome stability and affinity for a signal transducer. The gene is alternately spliced. This variant is an integral membrane protein localized to the ER and nuclear envelope.; protein phosphatase 5.2 (PP5.2); FUNCTIONS IN: protein binding, phosphoprotein phosphatase activity, protein serine/threonine phosphatase activity; INVOLVED IN: response to cadmium ion, nucleocytoplasmic transport, red or far-red light signaling pathway; LOCATED IN: nuclear envelope, integral to endoplasmic reticulum membrane, nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Metallophosphoesterase (InterPro:IPR004843), Protein phosphatase 5 (InterPro:IPR011236), Tetratricopeptide-like helical (InterPro:IPR011990), Serine/threonine phosphatase, PPP5 (InterPro:IPR013235), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT5G27840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35597 : 519.0) no description available & (gnl|cdd|29063 : 333.0) no description available & (p48489|pp1_orysa : 218.0) Serine/threonine-protein phosphatase PP1 (EC 3.1.3.16) - Oryza sativa (Rice) & (reliability: 1784.0) & (original description: Putative PP5, Description = Serine/threonine-protein phosphatase 5, PFAM = PF00149;PF08321;PF00515;PF13181)' T '29.4' 'protein.postranslational modification' 'niben101scf05468_503382-506939' '(at2g31800 : 374.0) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Integrin-linked protein kinase (InterPro:IPR016253), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT2G43850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29261 : 84.0) no description available & (gnl|cdd|35726 : 83.5) no description available & (reliability: 748.0) & (original description: Putative BnaC04g42550D, Description = BnaC04g42550D protein, PFAM = PF12796)' T '29.4' 'protein.postranslational modification' 'niben101scf05468_503388-527611' '(at2g31800 : 765.0) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Integrin-linked protein kinase (InterPro:IPR016253), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT2G43850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35413 : 251.0) no description available & (gnl|cdd|29142 : 181.0) no description available & (q8l4h4|nork_medtr : 97.4) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1530.0) & (original description: Putative APK1, Description = Ankyrin-kinase protein, PFAM = PF12796;PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf05483_611482-622959' '(at3g22790 : 785.0) Kinase interacting (KIP1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: kinase interacting (KIP1-like) family protein (TAIR:AT4G14760.1); Has 216725 Blast hits to 82224 proteins in 3436 species: Archae - 3482; Bacteria - 43267; Metazoa - 93913; Fungi - 17447; Plants - 11833; Viruses - 1017; Other Eukaryotes - 45766 (source: NCBI BLink). & (gnl|cdd|35383 : 119.0) no description available & (gnl|cdd|71206 : 119.0) no description available & (reliability: 1570.0) & (original description: Putative KIP1, Description = BnaA03g14020D protein, PFAM = PF07765)' T '29.4' 'protein.postranslational modification' 'niben101scf05484_351213-362452' '(at1g16220 : 536.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G79630.1); Has 5547 Blast hits to 5545 proteins in 292 species: Archae - 2; Bacteria - 12; Metazoa - 1332; Fungi - 643; Plants - 2421; Viruses - 5; Other Eukaryotes - 1132 (source: NCBI BLink). & (gnl|cdd|35917 : 201.0) no description available & (gnl|cdd|29062 : 184.0) no description available & (reliability: 1072.0) & (original description: Putative Os11g0417400, Description = Probable protein phosphatase 2C 75, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf05488_36937-40247' '(at3g57120 : 401.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (TAIR:AT1G51940.1); Has 39405 Blast hits to 37293 proteins in 1762 species: Archae - 14; Bacteria - 4560; Metazoa - 7143; Fungi - 1468; Plants - 21966; Viruses - 110; Other Eukaryotes - 4144 (source: NCBI BLink). & (gnl|cdd|36401 : 185.0) no description available & (o24585|cri4_maize : 96.7) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 88.0) no description available & (reliability: 802.0) & (original description: Putative BnaCnng47490D, Description = BnaCnng47490D protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf05516_481352-484905' '(at4g28560 : 409.0) encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Most similar to RIC6 and RIC8 (subfamily group II). Gene is expressed in all tissues examined.; ROP-interactive CRIB motif-containing protein 7 (RIC7); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G13230.1); Has 69989 Blast hits to 22570 proteins in 852 species: Archae - 23; Bacteria - 3729; Metazoa - 9129; Fungi - 406; Plants - 52718; Viruses - 0; Other Eukaryotes - 3984 (source: NCBI BLink). & (p93194|rpk1_iponi : 120.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35693 : 87.7) no description available & (reliability: 818.0) & (original description: Putative RIC7, Description = ROP-interactive CRIB motif-containing protein 7, PFAM = PF13855)' T '29.4' 'protein.postranslational modification' 'niben101scf05516_481535-485155' '(at4g28560 : 409.0) encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Most similar to RIC6 and RIC8 (subfamily group II). Gene is expressed in all tissues examined.; ROP-interactive CRIB motif-containing protein 7 (RIC7); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G13230.1); Has 69989 Blast hits to 22570 proteins in 852 species: Archae - 23; Bacteria - 3729; Metazoa - 9129; Fungi - 406; Plants - 52718; Viruses - 0; Other Eukaryotes - 3984 (source: NCBI BLink). & (p93194|rpk1_iponi : 120.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35693 : 86.6) no description available & (reliability: 818.0) & (original description: Putative RIC7, Description = Piriformospora indica-insensitive protein 2, PFAM = PF13855)' T '29.4' 'protein.postranslational modification' 'niben101scf05520_50828-58262' '(at1g04700 : 536.0) PB1 domain-containing protein tyrosine kinase; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT3G24715.1); Has 117644 Blast hits to 116217 proteins in 4946 species: Archae - 115; Bacteria - 12372; Metazoa - 45570; Fungi - 9947; Plants - 31841; Viruses - 450; Other Eukaryotes - 17349 (source: NCBI BLink). & (gnl|cdd|35413 : 303.0) no description available & (gnl|cdd|87344 : 242.0) no description available & (q8l4h4|nork_medtr : 98.6) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1072.0) & (original description: Putative STY2, Description = Serine/threonine-protein kinase CTR1, PFAM = PF00564;PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf05542_23143-30654' '(at1g09600 : 681.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G57700.1); Has 123498 Blast hits to 122030 proteins in 4353 species: Archae - 93; Bacteria - 13546; Metazoa - 45885; Fungi - 12568; Plants - 30937; Viruses - 467; Other Eukaryotes - 20002 (source: NCBI BLink). & (gnl|cdd|35820 : 654.0) no description available & (gnl|cdd|29142 : 263.0) no description available & (q05006|cdc22_medsa : 211.0) Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Medicago sativa (Alfalfa) & (reliability: 1362.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf05554_905184-920071' '(at1g77720 : 670.0) Encodes a predicted protein kinase based on sequence similarity.; putative protein kinase 1 (PPK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: MAPK/ERK kinase kinase 3 (TAIR:AT4G08470.1); Has 102737 Blast hits to 99628 proteins in 3502 species: Archae - 97; Bacteria - 12996; Metazoa - 35733; Fungi - 11774; Plants - 22485; Viruses - 236; Other Eukaryotes - 19416 (source: NCBI BLink). & (gnl|cdd|35816 : 439.0) no description available & (gnl|cdd|47550 : 216.0) no description available & (p52389|cdc2_vigun : 101.0) Cell division control protein 2 homolog (EC 2.7.11.22) (EC 2.7.11.23) (p34cdc2) - Vigna unguiculata (Cowpea) & (reliability: 1340.0) & (original description: Putative PPK1, Description = At1g77720, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf05566_349924-357563' '(q75lr7|sapk1_orysa : 519.0) Serine/threonine-protein kinase SAPK1 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 1) - Oryza sativa (Rice) & (at1g78290 : 483.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to karrikin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G33950.1); Has 112604 Blast hits to 110873 proteins in 3029 species: Archae - 114; Bacteria - 13128; Metazoa - 41421; Fungi - 12195; Plants - 25871; Viruses - 459; Other Eukaryotes - 19416 (source: NCBI BLink). & (gnl|cdd|35803 : 309.0) no description available & (gnl|cdd|29142 : 280.0) no description available & (reliability: 966.0) & (original description: Putative SAPK1, Description = Serine/threonine-protein kinase SAPK1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf05574_113398-116837' '(at3g11410 : 373.0) Encodes protein phosphatase 2C. Negative regulator of ABA signalling. Expressed in seeds during germination. mRNA up-regulated by drought and ABA.; protein phosphatase 2CA (PP2CA); FUNCTIONS IN: protein binding, protein serine/threonine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 6 processes; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 2 (TAIR:AT1G07430.1); Has 6894 Blast hits to 6854 proteins in 510 species: Archae - 4; Bacteria - 413; Metazoa - 1689; Fungi - 773; Plants - 2747; Viruses - 7; Other Eukaryotes - 1261 (source: NCBI BLink). & (gnl|cdd|47660 : 241.0) no description available & (gnl|cdd|35917 : 240.0) no description available & (reliability: 746.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf05609_61027-65278' '(at5g58950 : 574.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G46930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 278.0) no description available & (gnl|cdd|47549 : 241.0) no description available & (q8l4h4|nork_medtr : 99.8) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1148.0) & (original description: Putative pk1, Description = Serine/threonine-protein kinase HT1, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf05627_259091-268674' '(at5g51290 : 598.0) Diacylglycerol kinase family protein; FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206); BEST Arabidopsis thaliana protein match is: long-chain base (LCB) kinase 1 (TAIR:AT5G23450.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36331 : 362.0) no description available & (reliability: 1196.0) & (original description: Putative CERK, Description = Ceramide kinase, PFAM = PF00781)' T '29.4' 'protein.postranslational modification' 'niben101scf05644_169856-176875' '(at3g52890 : 670.0) KCBP-interacting protein kinase interacts specifically with the tail region of KCBP; KCBP-interacting protein kinase (KIPK); FUNCTIONS IN: protein binding, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G36350.1); Has 124693 Blast hits to 89359 proteins in 3581 species: Archae - 52; Bacteria - 15752; Metazoa - 49633; Fungi - 14477; Plants - 20322; Viruses - 421; Other Eukaryotes - 24036 (source: NCBI BLink). & (gnl|cdd|35830 : 605.0) no description available & (p47997|g11a_orysa : 517.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 168.0) no description available & (reliability: 1340.0) & (original description: Putative Os12g0480200, Description = Os12g0480200 protein, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf05664_413772-419557' '(at2g25620 : 365.0) Encodes DBP1, a member of the DBP factors (DNA-binding protein phosphatases) featuring sequence-specific DNA-binding and protein phosphatase activity. DBP1 is involved in plant-potyvirus interactions. Loss-of-function of DBP1 renders resistance to potyviruses.; DNA-binding protein phosphatase 1 (DBP1); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: regulation of defense response to virus; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G33700.1); Has 7196 Blast hits to 7030 proteins in 671 species: Archae - 12; Bacteria - 774; Metazoa - 1729; Fungi - 719; Plants - 2627; Viruses - 7; Other Eukaryotes - 1328 (source: NCBI BLink). & (gnl|cdd|35917 : 222.0) no description available & (gnl|cdd|29062 : 213.0) no description available & (reliability: 730.0) & (original description: Putative Os02g0799000, Description = Probable protein phosphatase 2C 27, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf05688_1371722-1376339' '(at1g79250 : 657.0) AGC kinase 1.7 (AGC1.7); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: root hair specific 3 (TAIR:AT1G16440.1). & (gnl|cdd|35830 : 628.0) no description available & (p47997|g11a_orysa : 517.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 163.0) no description available & (reliability: 1314.0) & (original description: Putative RHS3, Description = Serine/threonine-protein kinase RHS3, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf05697_16531-28049' '(at3g10540 : 815.0) 3-phosphoinositide-dependent protein kinase; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-1, 3-phosphoinositide dependent (InterPro:IPR015746), Protein kinase, catalytic domain (InterPro:IPR000719), Pleckstrin homology-type (InterPro:IPR011993); BEST Arabidopsis thaliana protein match is: 3'-phosphoinositide-dependent protein kinase 1 (TAIR:AT5G04510.1); Has 127579 Blast hits to 125597 proteins in 4638 species: Archae - 184; Bacteria - 15229; Metazoa - 47076; Fungi - 13122; Plants - 29847; Viruses - 648; Other Eukaryotes - 21473 (source: NCBI BLink). & (gnl|cdd|35812 : 538.0) no description available & (gnl|cdd|29142 : 281.0) no description available & (q6x4a2|cipk1_orysa : 160.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1630.0) & (original description: Putative PDPK2, Description = 3-phosphoinositide-dependent protein kinase 2, PFAM = PF00069;PF14593)' T '29.4' 'protein.postranslational modification' 'niben101scf05712_82794-93346' '(at1g14000 : 716.0) Encodes a protein with similarity to members of the C1 subgroup of MAP kinase kinase kinases. Interacts physically with the receptor kinase BRL2/VH1 and appears to be involved in auxin and brassinosteriod signaling.; VH1-interacting kinase (VIK); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G58760.1); Has 139285 Blast hits to 133759 proteins in 5118 species: Archae - 180; Bacteria - 15286; Metazoa - 53967; Fungi - 12530; Plants - 33711; Viruses - 527; Other Eukaryotes - 23084 (source: NCBI BLink). & (gnl|cdd|35413 : 273.0) no description available & (gnl|cdd|47549 : 237.0) no description available & (q8lpb4|pskr_dauca : 115.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1432.0) & (original description: Putative VIK, Description = VH1-interacting kinase, PFAM = PF07714;PF12796)' T '29.4' 'protein.postranslational modification' 'niben101scf05713_409240-413365' '(at5g58950 : 615.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G46930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 295.0) no description available & (gnl|cdd|47549 : 249.0) no description available & (q02723|rkin1_secce : 95.1) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (reliability: 1230.0) & (original description: Putative pk1, Description = Protein kinase (PK), PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf05756_81894-86349' '(at5g57050 : 392.0) Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo.; ABA INSENSITIVE 2 (ABI2); CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G26080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35917 : 237.0) no description available & (gnl|cdd|47660 : 226.0) no description available & (reliability: 784.0) & (original description: Putative ABI2, Description = Protein phosphatase 2C 77, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf05800_346104-351156' '(at5g25510 : 715.0) Protein phosphatase 2A regulatory B subunit family protein; FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: chloroplast, protein phosphatase type 2A complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT4G15415.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85563 : 653.0) no description available & (gnl|cdd|37296 : 587.0) no description available & (reliability: 1430.0) & (original description: Putative B'IOTA, Description = Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform, PFAM = PF01603)' T '29.4' 'protein.postranslational modification' 'niben101scf05805_269528-277123' '(at2g17890 : 793.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 16 (CPK16); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 18 (TAIR:AT4G36070.1); Has 126765 Blast hits to 124478 proteins in 3942 species: Archae - 195; Bacteria - 14619; Metazoa - 47448; Fungi - 14527; Plants - 27603; Viruses - 509; Other Eukaryotes - 21864 (source: NCBI BLink). & (p53681|crk_dauca : 431.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 370.0) no description available & (gnl|cdd|47550 : 272.0) no description available & (reliability: 1586.0) & (original description: Putative CPK16, Description = Calcium-dependent protein kinase 16, PFAM = PF00069;PF13499;PF13202)' T '29.4' 'protein.postranslational modification' 'niben101scf05808_75694-88708' '(at1g03590 : 615.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G03415.2); Has 5799 Blast hits to 5797 proteins in 294 species: Archae - 0; Bacteria - 4; Metazoa - 1418; Fungi - 691; Plants - 2505; Viruses - 5; Other Eukaryotes - 1176 (source: NCBI BLink). & (gnl|cdd|35917 : 205.0) no description available & (gnl|cdd|29062 : 191.0) no description available & (reliability: 1230.0) & (original description: Putative F9H3, Description = Phosphatase 2C family protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf05822_34412-37758' '(at5g01820 : 485.0) Encodes a CBL-interacting serine/threonine protein kinase.; serine/threonine protein kinase 1 (SR1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SOS3-interacting protein 4 (TAIR:AT2G30360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 366.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 342.0) no description available & (gnl|cdd|29142 : 298.0) no description available & (reliability: 970.0) & (original description: Putative CIPK14, Description = CBL-interacting serine/threonine-protein kinase 14, PFAM = PF03822;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf05822_316831-320228' '(at5g58380 : 531.0) Encodes a CBL-interacting protein kinase with similarity to SOS protein kinase.; SOS3-interacting protein 1 (SIP1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 2 (TAIR:AT5G07070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 428.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 362.0) no description available & (gnl|cdd|29142 : 299.0) no description available & (reliability: 1062.0) & (original description: Putative CIPK2, Description = CBL-interacting protein kinase 2, PFAM = PF03822;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf05841_113533-117140' '(gnl|cdd|39379 : 170.0) no description available & (at5g13530 : 114.0) Encodes KEEP ON GOING (KEG), a RING E3 ligase involved in abscisic acid signaling. KEG is essential for Arabidopsis growth and development. ABA promotes KEG degradation via the ubiquitin dependent 26S proteasome pathway.; KEEP ON GOING (KEG); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Ankyrin repeat-containing domain (InterPro:IPR020683), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G32250.3). & (gnl|cdd|29261 : 111.0) no description available & (reliability: 228.0) & (original description: Putative PAM1, Description = Penetration and arbuscule morphogenesis protein, PFAM = PF00635;PF12796;PF12796;PF12796)' T '29.4' 'protein.postranslational modification' 'niben101scf05848_460088-464455' '(at3g02800 : 249.0) Tyrosine phosphatase family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic (InterPro:IPR020428), Protein-tyrosine phosphatase, SIW14-like (InterPro:IPR004861); BEST Arabidopsis thaliana protein match is: Phosphotyrosine protein phosphatases superfamily protein (TAIR:AT5G16480.1); Has 721 Blast hits to 711 proteins in 161 species: Archae - 0; Bacteria - 73; Metazoa - 5; Fungi - 358; Plants - 145; Viruses - 0; Other Eukaryotes - 140 (source: NCBI BLink). & (gnl|cdd|36785 : 206.0) no description available & (gnl|cdd|86260 : 173.0) no description available & (reliability: 476.0) & (original description: Putative At3g02800, Description = Atypical dual-specificity phosphatase, PFAM = PF03162)' T '29.4' 'protein.postranslational modification' 'niben101scf05880_259539-263641' '(at2g30020 : 386.0) Encodes AP2C1. Belongs to the clade B of the PP2C-superfamily. Acts as a MAPK phosphatase that negatively regulates MPK4 and MPK6.; Protein phosphatase 2C family protein; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G07160.1); Has 6969 Blast hits to 6779 proteins in 496 species: Archae - 2; Bacteria - 405; Metazoa - 1770; Fungi - 794; Plants - 2680; Viruses - 9; Other Eukaryotes - 1309 (source: NCBI BLink). & (gnl|cdd|35917 : 252.0) no description available & (gnl|cdd|29062 : 246.0) no description available & (reliability: 772.0) & (original description: Putative At2g30020, Description = Probable protein phosphatase 2C 25, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf05912_189528-208354' '(at5g23720 : 569.0) Encodes a protein tyrosine phosphatase Propyzamide-Hypersensitive 1 (PHS1). One of the mutant alleles, phs1-1, is hypersensitive to the microtubule-destabilizing drug propyzamide, suggesting that PHS1 may be involved in phosphorylation cascades that control the dynamics of cortical microtubules in plant cells. A second allele, phs1-3, is hypersensitive to abscisic acid, indicating a possible involvement of PHS1 in ABA signalling.; PROPYZAMIDE-HYPERSENSITIVE 1 (PHS1); FUNCTIONS IN: protein tyrosine/serine/threonine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: cortical microtubule organization, regulation of gene expression, response to abscisic acid stimulus, regulation of stomatal movement; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422), Protein kinase-like domain (InterPro:IPR011009), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Actin-fragmin kinase, catalytic (InterPro:IPR015275), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340); BEST Arabidopsis thaliana protein match is: dual specificity protein phosphatase 1 (TAIR:AT3G23610.2); Has 3765 Blast hits to 3755 proteins in 331 species: Archae - 11; Bacteria - 94; Metazoa - 2032; Fungi - 332; Plants - 347; Viruses - 172; Other Eukaryotes - 777 (source: NCBI BLink). & (gnl|cdd|87833 : 161.0) no description available & (gnl|cdd|36928 : 112.0) no description available & (reliability: 1138.0) & (original description: Putative PHS1, Description = Dual specificity phosphatase family protein, PFAM = PF00782;PF09192)' T '29.4' 'protein.postranslational modification' 'niben101scf05916_47726-55935' '(at2g26980 : 729.0) encodes a serine-threonine protein kinase whose expression increases in response to abscisic acid, cold, drought, high salt, and wounding conditions. The gene is expressed in developing seeds and seedlings. Lines carrying a T-DNA insertions have reduced germination efficiency and expression of cold, high-salt, and abscisic acid marker genes are altered, but not drought-response markers.; CBL-interacting protein kinase 3 (CIPK3); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Ca2+regulated serine-threonine protein kinase family protein (TAIR:AT5G21326.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 667.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 349.0) no description available & (gnl|cdd|29142 : 282.0) no description available & (reliability: 1458.0) & (original description: Putative CIPK3, Description = CBL-interacting serine/threonine-protein kinase 3, PFAM = PF00069;PF03822)' T '29.4' 'protein.postranslational modification' 'niben101scf05938_166980-176195' '(at3g50530 : 919.0) CDPK-related kinase; CDPK-related kinase (CRK); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: CDPK-related kinase 1 (TAIR:AT2G41140.1). & (p53681|crk_dauca : 919.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 364.0) no description available & (gnl|cdd|29142 : 272.0) no description available & (reliability: 1838.0) & (original description: Putative CRK5, Description = CDPK-related kinase 5, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf05955_258297-274997' '(at3g62010 : 651.0) unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages. & (reliability: 1302.0) & (original description: Putative At3g62010, Description = Predicted protein, PFAM = PF14566)' T '29.4' 'protein.postranslational modification' 'niben101scf05997_97003-119836' '(at1g03920 : 807.0) Protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT2G20470.1); Has 109567 Blast hits to 108299 proteins in 4009 species: Archae - 130; Bacteria - 13646; Metazoa - 38992; Fungi - 11695; Plants - 26009; Viruses - 442; Other Eukaryotes - 18653 (source: NCBI BLink). & (gnl|cdd|35825 : 716.0) no description available & (gnl|cdd|47550 : 281.0) no description available & (p47997|g11a_orysa : 167.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 1614.0) & (original description: Putative ndrA, Description = Putative uncharacterized protein ndrA, PFAM = PF00433;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf06026_110906-120172' '(at1g18670 : 602.0) Encodes a cyclin-dependent kinase-like protein with a ser/thr protein kinase domain and an N-terminal myristoylation sequence. Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do.; IMPAIRED IN BABA-INDUCED STERILITY 1 (IBS1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G74330.2); Has 121773 Blast hits to 120368 proteins in 4310 species: Archae - 86; Bacteria - 13259; Metazoa - 45481; Fungi - 12893; Plants - 29647; Viruses - 443; Other Eukaryotes - 19964 (source: NCBI BLink). & (gnl|cdd|35820 : 587.0) no description available & (gnl|cdd|29142 : 258.0) no description available & (q38772|cdc2a_antma : 218.0) Cell division control protein 2 homolog A (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (reliability: 1204.0) & (original description: Putative IBS1, Description = Cyclin-dependent kinase-like protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf06064_1-4161' '(at4g32250 : 694.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: protein kinases;ubiquitin-protein ligases (TAIR:AT5G13530.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35419 : 145.0) no description available & (gnl|cdd|29142 : 142.0) no description available & (reliability: 1388.0) & (original description: Putative PGSC0003DMG400022766, Description = E3 ubiquitin-protein ligase KEG, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf06077_136128-141027' '(at2g17530 : 652.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G35500.1). & (gnl|cdd|36504 : 306.0) no description available & (gnl|cdd|29142 : 106.0) no description available & (reliability: 1304.0) & (original description: Putative srpk2, Description = At2g17530, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf06081_198400-207649' '(q9swb4|parp3_soybn : 1110.0) Poly [ADP-ribose] polymerase 3 (EC 2.4.2.30) (PARP-3) (ADPRT 3) (NAD(+) ADP-ribosyltransferase 3) (Poly[ADP-ribose] synthetase 3) - Glycine max (Soybean) & (at5g22470 : 1061.0) NAD+ ADP-ribosyltransferases;NAD+ ADP-ribosyltransferases; FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity; INVOLVED IN: protein amino acid ADP-ribosylation; LOCATED IN: intracellular, nucleus; CONTAINS InterPro DOMAIN/s: WGR (InterPro:IPR008893), Poly(ADP-ribose) polymerase, regulatory domain (InterPro:IPR004102), PADR1 (InterPro:IPR012982), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: poly(ADP-ribose) polymerase 2 (TAIR:AT2G31320.1); Has 672 Blast hits to 662 proteins in 152 species: Archae - 0; Bacteria - 20; Metazoa - 347; Fungi - 74; Plants - 111; Viruses - 2; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|30068 : 291.0) no description available & (gnl|cdd|36255 : 219.0) no description available & (reliability: 2122.0) & (original description: Putative PARP3, Description = Poly [ADP-ribose] polymerase 3, PFAM = PF05406;PF00644;PF00533;PF08063;PF02877)' T '29.4' 'protein.postranslational modification' 'niben101scf06149_43421-58506' '(at2g31320 : 1315.0) Abiotic Stress-inducible gene.; poly(ADP-ribose) polymerase 2 (PARP2); FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity, NAD or NADH binding, DNA binding, zinc ion binding; INVOLVED IN: DNA repair, response to oxidative stress, response to abscisic acid stimulus, protein amino acid ADP-ribosylation, response to abiotic stimulus; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: PADR1 (InterPro:IPR012982), Zinc finger, PARP-type (InterPro:IPR001510), WGR (InterPro:IPR008893), Poly(ADP-ribose) polymerase, regulatory domain (InterPro:IPR004102), NAD+ ADP-ribosyltransferase (InterPro:IPR008288), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: NAD+ ADP-ribosyltransferases;NAD+ ADP-ribosyltransferases (TAIR:AT5G22470.1); Has 1243 Blast hits to 1018 proteins in 163 species: Archae - 0; Bacteria - 14; Metazoa - 746; Fungi - 100; Plants - 173; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink). & (q7eyv7|parp1_orysa : 1224.0) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1) (ADPRT 1) (NAD(+) ADP-ribosyltransferase 1) (Poly[ADP-ribose] synthetase 1) - Oryza sativa (Rice) & (gnl|cdd|30068 : 463.0) no description available & (gnl|cdd|36255 : 271.0) no description available & (reliability: 2630.0) & (original description: Putative PARP1, Description = Poly [ADP-ribose] polymerase 1, PFAM = PF00533;PF00644;PF08063;PF05406;PF00645;PF00645;PF02877)' T '29.4' 'protein.postranslational modification' 'niben101scf06158_178633-192846' '(at3g58760 : 573.0) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT4G18950.1); Has 165609 Blast hits to 134537 proteins in 4793 species: Archae - 244; Bacteria - 16399; Metazoa - 69591; Fungi - 13531; Plants - 33415; Viruses - 845; Other Eukaryotes - 31584 (source: NCBI BLink). & (gnl|cdd|35413 : 248.0) no description available & (gnl|cdd|87344 : 200.0) no description available & (q6x4a2|cipk1_orysa : 106.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1146.0) & (original description: Putative APK1, Description = Ankyrin-kinase protein, PFAM = PF12796;PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf06164_237402-245469' '(gnl|cdd|36595 : 400.0) no description available & (at4g23660 : 389.0) Encodes para-hydroxy benzoate polyprenyl diphosphate transferase. The enzyme was shown to be able to use a wide range of prenyl substrates : from GPP (C10) to decaprenyl diphosphate (C50).; polyprenyltransferase 1 (PPT1); FUNCTIONS IN: 4-hydroxybenzoate nonaprenyltransferase activity; INVOLVED IN: ubiquinone biosynthetic process, embryo development; LOCATED IN: integral to membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 4-hydroxybenzoate polyprenyl transferase (InterPro:IPR006370), UbiA prenyltransferase (InterPro:IPR000537). & (gnl|cdd|84364 : 327.0) no description available & (reliability: 778.0) & (original description: Putative PPT1, Description = 4-hydroxybenzoate polyprenyltransferase, mitochondrial, PFAM = PF01040)' T '29.4' 'protein.postranslational modification' 'niben101scf06290_57772-64322' '(at2g25760 : 1094.0) Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT3G13670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36379 : 242.0) no description available & (gnl|cdd|29142 : 110.0) no description available & (reliability: 2188.0) & (original description: Putative CKI, Description = Casein kinase I, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf06295_557741-563549' '(at4g23290 : 341.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 21 (CRK21); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 30 (TAIR:AT4G11460.1); Has 118308 Blast hits to 116879 proteins in 4391 species: Archae - 92; Bacteria - 13400; Metazoa - 43403; Fungi - 10140; Plants - 33618; Viruses - 391; Other Eukaryotes - 17264 (source: NCBI BLink). & (gnl|cdd|36401 : 313.0) no description available & (gnl|cdd|47913 : 235.0) no description available & (q8lpb4|pskr_dauca : 203.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 678.0) & (original description: Putative Chrk1, Description = Receptor-like kinase CHRK1, PFAM = PF07714;PF00704)' T '29.4' 'protein.postranslational modification' 'niben101scf06349_182509-191974' '(at5g14720 : 584.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G79640.1); Has 122716 Blast hits to 120970 proteins in 3289 species: Archae - 117; Bacteria - 14305; Metazoa - 44836; Fungi - 12007; Plants - 31268; Viruses - 500; Other Eukaryotes - 19683 (source: NCBI BLink). & (gnl|cdd|35802 : 300.0) no description available & (gnl|cdd|47550 : 141.0) no description available & (q5qn75|m2k1_orysa : 93.2) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1168.0) & (original description: Putative OXSR1, Description = Serine/threonine-protein kinase fray2, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf06423_323567-327765' '(at5g47750 : 752.0) D6 protein kinase like 2 (D6PKL2); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleolus, nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 1 (TAIR:AT4G26610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p47997|g11a_orysa : 681.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|35830 : 671.0) no description available & (gnl|cdd|47550 : 169.0) no description available & (reliability: 1504.0) & (original description: Putative D6PKL2, Description = Serine/threonine-protein kinase D6PKL2, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf06442_38494-44506' '(q40518|msk1_tobac : 174.0) Shaggy-related protein kinase NtK-1 (EC 2.7.11.1) - Nicotiana tabacum (Common tobacco) & (at3g05840 : 173.0) encodes a SHAGGY-like kinase involved in meristem organization.; ATSK12; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: meristem structural organization, gynoecium development, phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: shaggy-related kinase 11 (TAIR:AT5G26751.1); Has 106116 Blast hits to 104748 proteins in 3681 species: Archae - 81; Bacteria - 10864; Metazoa - 38225; Fungi - 11828; Plants - 26475; Viruses - 386; Other Eukaryotes - 18257 (source: NCBI BLink). & (gnl|cdd|35877 : 136.0) no description available & (reliability: 346.0) & (original description: Putative gsk3, Description = Shaggy-related protein kinase theta, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben101scf06461_424207-442184' '(at2g24360 : 628.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G31170.3); Has 132546 Blast hits to 130322 proteins in 4939 species: Archae - 142; Bacteria - 14767; Metazoa - 50018; Fungi - 12226; Plants - 34060; Viruses - 645; Other Eukaryotes - 20688 (source: NCBI BLink). & (gnl|cdd|35413 : 313.0) no description available & (gnl|cdd|87344 : 239.0) no description available & (q6x4a2|cipk1_orysa : 116.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1256.0) & (original description: Putative DPK1, Description = Os08g0224100 protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf06473_147595-155180' '(at1g71530 : 647.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G33770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35820 : 618.0) no description available & (gnl|cdd|29142 : 259.0) no description available & (q38772|cdc2a_antma : 231.0) Cell division control protein 2 homolog A (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (reliability: 1294.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf06497_62212-74474' '(at1g67820 : 325.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G30020.1); Has 6733 Blast hits to 6560 proteins in 362 species: Archae - 6; Bacteria - 120; Metazoa - 1758; Fungi - 815; Plants - 2713; Viruses - 9; Other Eukaryotes - 1312 (source: NCBI BLink). & (gnl|cdd|29062 : 202.0) no description available & (gnl|cdd|35917 : 198.0) no description available & (reliability: 650.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf06524_172420-183715' '(at2g35350 : 491.0) Encodes a protein most similar to the POLTERGEIST locus. Double mutant analysis of loss of function alleles indicate PLL1 functions redundantly with POL to regulate meristem size and pedicel length. Acts in a dose dependent manner with POL to suppress the clv1, clv2 and clv3 phenotypes.; poltergeist like 1 (PLL1); FUNCTIONS IN: phospholipid binding, protein serine/threonine phosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G46920.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35919 : 280.0) no description available & (gnl|cdd|29062 : 123.0) no description available & (reliability: 982.0) & (original description: Putative BnaA10g27140D, Description = BnaA10g27140D protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf06566_61912-78638' '(at4g35780 : 730.0) ACT-like protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Amino acid-binding ACT (InterPro:IPR002912), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ACT-like protein tyrosine kinase family protein (TAIR:AT2G17700.1); Has 132714 Blast hits to 130570 proteins in 5062 species: Archae - 147; Bacteria - 14500; Metazoa - 50865; Fungi - 12053; Plants - 33999; Viruses - 512; Other Eukaryotes - 20638 (source: NCBI BLink). & (gnl|cdd|35413 : 316.0) no description available & (gnl|cdd|87344 : 267.0) no description available & (q8lkz1|nork_pea : 119.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 1460.0) & (original description: Putative BnaC07g06560D, Description = BnaC07g06560D protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf06578_1-6231' '(at1g11340 : 838.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), EGF-like, type 3 (InterPro:IPR000742), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G11410.1); Has 123060 Blast hits to 121063 proteins in 4656 species: Archae - 122; Bacteria - 13729; Metazoa - 45275; Fungi - 10148; Plants - 35343; Viruses - 433; Other Eukaryotes - 18010 (source: NCBI BLink). & (gnl|cdd|36401 : 333.0) no description available & (p17840|slsg3_braol : 328.0) S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage) & (gnl|cdd|47549 : 181.0) no description available & (reliability: 1676.0) & (original description: Putative RKS1, Description = G-type lectin S-receptor-like serine/threonine-protein kinase RKS1, PFAM = PF08276;PF01453;PF00954;PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf06578_48161-107893' '(at4g19110 : 521.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G45430.2); Has 112836 Blast hits to 111739 proteins in 3697 species: Archae - 107; Bacteria - 12214; Metazoa - 43480; Fungi - 11684; Plants - 25102; Viruses - 509; Other Eukaryotes - 19740 (source: NCBI BLink). & (gnl|cdd|35880 : 455.0) no description available & (gnl|cdd|29142 : 268.0) no description available & (q05006|cdc22_medsa : 210.0) Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Medicago sativa (Alfalfa) & (reliability: 1042.0) & (original description: Putative crk2, Description = Serine/threonine-protein kinase MAK, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf06583_541810-547772' '(at5g27930 : 435.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G05640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29062 : 199.0) no description available & (gnl|cdd|35917 : 198.0) no description available & (reliability: 870.0) & (original description: Putative npp2c1, Description = Phosphatase 2C family protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf06621_77080-91587' '(at5g23720 : 1065.0) Encodes a protein tyrosine phosphatase Propyzamide-Hypersensitive 1 (PHS1). One of the mutant alleles, phs1-1, is hypersensitive to the microtubule-destabilizing drug propyzamide, suggesting that PHS1 may be involved in phosphorylation cascades that control the dynamics of cortical microtubules in plant cells. A second allele, phs1-3, is hypersensitive to abscisic acid, indicating a possible involvement of PHS1 in ABA signalling.; PROPYZAMIDE-HYPERSENSITIVE 1 (PHS1); FUNCTIONS IN: protein tyrosine/serine/threonine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: cortical microtubule organization, regulation of gene expression, response to abscisic acid stimulus, regulation of stomatal movement; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422), Protein kinase-like domain (InterPro:IPR011009), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Actin-fragmin kinase, catalytic (InterPro:IPR015275), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340); BEST Arabidopsis thaliana protein match is: dual specificity protein phosphatase 1 (TAIR:AT3G23610.2); Has 3765 Blast hits to 3755 proteins in 331 species: Archae - 11; Bacteria - 94; Metazoa - 2032; Fungi - 332; Plants - 347; Viruses - 172; Other Eukaryotes - 777 (source: NCBI BLink). & (gnl|cdd|87833 : 163.0) no description available & (gnl|cdd|36928 : 111.0) no description available & (reliability: 2130.0) & (original description: Putative PHS1, Description = Dual specificity protein phosphatase PHS1, PFAM = PF00782;PF09192)' T '29.4' 'protein.postranslational modification' 'niben101scf06671_416993-424271' '(at4g11260 : 375.0) Functions in plant disease resistance signaling, SCF(TIR1) mediated degradation of Aux/IAA proteins and HSP90 mediated degradation of R resistance proteins. AtSGT1a and AtSGT1b are functionally redundant in the resistance to pathogenes. AtSGT1b was more highly expressed than AtSGT1. The N-terminal TPR domain of AtSGT1a reduces the steady-state level of Arabidopsis SGT1 proteins whereas the same domain from AtSGT1b enhances SGT1 accumulation. The TPR domain is dispensable for SGT1 resistance.; SGT1B; FUNCTIONS IN: protein binding; INVOLVED IN: in 6 processes; LOCATED IN: SCF ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), Tetratricopeptide-like helical (InterPro:IPR011990), SGS (InterPro:IPR007699), Tetratricopeptide repeat-containing (InterPro:IPR013026), HSP20-like chaperone (InterPro:IPR008978), Tetratricopeptide repeat (InterPro:IPR019734), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: phosphatase-related (TAIR:AT4G23570.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36523 : 234.0) no description available & (gnl|cdd|34694 : 113.0) no description available & (reliability: 750.0) & (original description: Putative SGT1B, Description = Protein SGT1 homolog B, PFAM = PF04969;PF13181;PF13181;PF05002)' T '29.4' 'protein.postranslational modification' 'niben101scf06687_341765-353378' '(at1g73460 : 1267.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane, cytoplasm; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G73450.1); Has 92811 Blast hits to 90539 proteins in 3072 species: Archae - 97; Bacteria - 11008; Metazoa - 34744; Fungi - 12175; Plants - 16778; Viruses - 387; Other Eukaryotes - 17622 (source: NCBI BLink). & (gnl|cdd|35886 : 450.0) no description available & (gnl|cdd|29142 : 205.0) no description available & (q5sn53|mpk8_orysa : 119.0) Mitogen-activated protein kinase 8 (EC 2.7.11.24) (MAP kinase 8) (OsWJUMK1) (Wound- and JA-uninducible MAP kinase 1) - Oryza sativa (Rice) & (reliability: 2534.0) & (original description: Putative DYRK2, Description = Dual-specificity tyrosine regulated protein kinase 2, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf06698_51235-55850' '(at4g32830 : 521.0) Encodes a member of a family of Ser/Thr kinases whose activities peak during cell division. Transcripts are abundant in tissues rich in dividing cells like roots and flowers but are low or absent in fully expanded leaves and stems. In interphase cells, the protein is predominantly nuclear. During mitosis, the protein associates with plant-specific cytoskeletal structures (preprophase band, phragmoplast, nascent cell plate) that are necessary for cytokinesis as well as with the microtubule spindle. It specifically phosphorylates Ser10 of histone H3 and colocalizes with phosphorylated histone H3 during mitosis.; ataurora1 (AUR1); CONTAINS InterPro DOMAIN/s: Spindle assembly checkpoint kinase (InterPro:IPR020663), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ataurora2 (TAIR:AT2G25880.1); Has 130781 Blast hits to 128539 proteins in 4385 species: Archae - 169; Bacteria - 15091; Metazoa - 48154; Fungi - 12951; Plants - 32302; Viruses - 558; Other Eukaryotes - 21556 (source: NCBI BLink). & (gnl|cdd|35800 : 415.0) no description available & (gnl|cdd|29142 : 276.0) no description available & (q6x4a2|cipk1_orysa : 176.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1042.0) & (original description: Putative AUR1, Description = Serine/threonine-protein kinase Aurora-1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf06769_171566-194062' '(at5g03730 : 981.0) Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed.; CONSTITUTIVE TRIPLE RESPONSE 1 (CTR1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G24480.1); Has 126606 Blast hits to 124675 proteins in 4966 species: Archae - 112; Bacteria - 13843; Metazoa - 48138; Fungi - 11278; Plants - 33351; Viruses - 509; Other Eukaryotes - 19375 (source: NCBI BLink). & (gnl|cdd|35413 : 316.0) no description available & (gnl|cdd|87344 : 262.0) no description available & (q8lkz1|nork_pea : 119.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 1962.0) & (original description: Putative CTR1, Description = Serine/threonine-protein kinase CTR1, PFAM = PF14381;PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf06772_131131-145964' '(at4g08500 : 422.0) Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301. Mediates cold, salt, cadmium and wounding stress signalling. Phosphorylates MEK1.; MAPK/ERK kinase kinase 1 (MEKK1); FUNCTIONS IN: protein binding, kinase binding, DNA binding, MAP kinase kinase kinase activity, kinase activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 9 (TAIR:AT4G08480.1); Has 132336 Blast hits to 130259 proteins in 4567 species: Archae - 142; Bacteria - 14700; Metazoa - 49430; Fungi - 12971; Plants - 32949; Viruses - 685; Other Eukaryotes - 21459 (source: NCBI BLink). & (gnl|cdd|35419 : 283.0) no description available & (gnl|cdd|29142 : 267.0) no description available & (q5qn75|m2k1_orysa : 124.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 764.0) & (original description: Putative MEKK1, Description = Mitogen-activated protein kinase kinase kinase 1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf06779_343144-349159' '(p48489|pp1_orysa : 474.0) Serine/threonine-protein phosphatase PP1 (EC 3.1.3.16) - Oryza sativa (Rice) & (at2g39840 : 472.0) Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers.; type one serine/threonine protein phosphatase 4 (TOPP4); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: type one serine/threonine protein phosphatase 2 (TAIR:AT5G59160.3); Has 7176 Blast hits to 6978 proteins in 618 species: Archae - 78; Bacteria - 533; Metazoa - 2415; Fungi - 1410; Plants - 987; Viruses - 16; Other Eukaryotes - 1737 (source: NCBI BLink). & (gnl|cdd|35595 : 405.0) no description available & (gnl|cdd|29063 : 364.0) no description available & (reliability: 944.0) & (original description: Putative PP1, Description = Serine/threonine-protein phosphatase, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'niben101scf06823_266133-270752' '(at4g33920 : 544.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: mitochondrion, protein serine/threonine phosphatase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G51370.1); Has 5306 Blast hits to 5302 proteins in 304 species: Archae - 0; Bacteria - 42; Metazoa - 1364; Fungi - 564; Plants - 2405; Viruses - 3; Other Eukaryotes - 928 (source: NCBI BLink). & (gnl|cdd|35919 : 341.0) no description available & (gnl|cdd|47660 : 174.0) no description available & (reliability: 1088.0) & (original description: Putative pp2C2, Description = Serine/threonine phosphatase family, 2C domain protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf06909_35970-41399' '(at3g08760 : 548.0) Encodes an osmotic stress-inducible kinase that functions as a negative regulator of osmotic stress signaling in plants.; ATSIK; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G15080.1); Has 42849 Blast hits to 42385 proteins in 1619 species: Archae - 20; Bacteria - 2695; Metazoa - 11858; Fungi - 1356; Plants - 23776; Viruses - 143; Other Eukaryotes - 3001 (source: NCBI BLink). & (gnl|cdd|36401 : 256.0) no description available & (q8lpb4|pskr_dauca : 143.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 108.0) no description available & (reliability: 1096.0) & (original description: Putative Os01g0822200, Description = Os01g0822200 protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf06916_44782-69256' '(at4g35780 : 752.0) ACT-like protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Amino acid-binding ACT (InterPro:IPR002912), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ACT-like protein tyrosine kinase family protein (TAIR:AT2G17700.1); Has 132714 Blast hits to 130570 proteins in 5062 species: Archae - 147; Bacteria - 14500; Metazoa - 50865; Fungi - 12053; Plants - 33999; Viruses - 512; Other Eukaryotes - 20638 (source: NCBI BLink). & (gnl|cdd|35413 : 311.0) no description available & (gnl|cdd|87344 : 268.0) no description available & (q8lkz1|nork_pea : 119.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 1504.0) & (original description: Putative STY17, Description = Serine/threonine-protein kinase STY17, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf06933_195566-204168' '(at2g24360 : 614.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G31170.3); Has 132546 Blast hits to 130322 proteins in 4939 species: Archae - 142; Bacteria - 14767; Metazoa - 50018; Fungi - 12226; Plants - 34060; Viruses - 645; Other Eukaryotes - 20688 (source: NCBI BLink). & (gnl|cdd|35413 : 317.0) no description available & (gnl|cdd|87344 : 246.0) no description available & (q6x4a2|cipk1_orysa : 115.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1228.0) & (original description: Putative DPK1, Description = Os08g0224100 protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf06999_111727-122654' '(gnl|cdd|85563 : 687.0) no description available & (at3g09880 : 656.0) Encodes B' regulatory subunit of PP2A (AtB'beta).; ATB' BETA; FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: protein phosphatase type 2A complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT5G03470.1); Has 1186 Blast hits to 1156 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 571; Fungi - 167; Plants - 302; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink). & (gnl|cdd|37296 : 641.0) no description available & (reliability: 1312.0) & (original description: Putative B'BETA, Description = Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform, PFAM = PF01603)' T '29.4' 'protein.postranslational modification' 'niben101scf07006_33176-63923' '(at5g13530 : 2396.0) Encodes KEEP ON GOING (KEG), a RING E3 ligase involved in abscisic acid signaling. KEG is essential for Arabidopsis growth and development. ABA promotes KEG degradation via the ubiquitin dependent 26S proteasome pathway.; KEEP ON GOING (KEG); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Ankyrin repeat-containing domain (InterPro:IPR020683), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G32250.3). & (gnl|cdd|35419 : 145.0) no description available & (gnl|cdd|29142 : 142.0) no description available & (reliability: 4792.0) & (original description: Putative KEG, Description = E3 ubiquitin-protein ligase KEG, PFAM = PF13639;PF12796;PF12796;PF12796;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf07015_96611-108595' '(at5g28850 : 561.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G28900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37773 : 410.0) no description available & (reliability: 1120.0) & (original description: Putative P2R3B, Description = Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha, PFAM = PF13499)' T '29.4' 'protein.postranslational modification' 'niben101scf07017_95751-103496' '(at5g01850 : 396.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase, ATN1-like (InterPro:IPR015784); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G27560.1); Has 131148 Blast hits to 129643 proteins in 5072 species: Archae - 162; Bacteria - 15033; Metazoa - 49603; Fungi - 12189; Plants - 33321; Viruses - 522; Other Eukaryotes - 20318 (source: NCBI BLink). & (gnl|cdd|35413 : 258.0) no description available & (gnl|cdd|29142 : 186.0) no description available & (q8l4h4|nork_medtr : 93.6) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 792.0) & (original description: Putative ATN1, Description = Serine/threonine-protein kinase HT1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf07019_100008-106677' '(at2g17890 : 769.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 16 (CPK16); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 18 (TAIR:AT4G36070.1); Has 126765 Blast hits to 124478 proteins in 3942 species: Archae - 195; Bacteria - 14619; Metazoa - 47448; Fungi - 14527; Plants - 27603; Viruses - 509; Other Eukaryotes - 21864 (source: NCBI BLink). & (p53681|crk_dauca : 442.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 370.0) no description available & (gnl|cdd|47550 : 263.0) no description available & (reliability: 1538.0) & (original description: Putative CPK16, Description = Calcium-dependent protein kinase 16, PFAM = PF00069;PF13833;PF13202)' T '29.4' 'protein.postranslational modification' 'niben101scf07040_48791-54470' '(at1g09160 : 619.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G68410.2); Has 5570 Blast hits to 5569 proteins in 486 species: Archae - 4; Bacteria - 416; Metazoa - 1194; Fungi - 467; Plants - 2390; Viruses - 7; Other Eukaryotes - 1092 (source: NCBI BLink). & (gnl|cdd|35917 : 194.0) no description available & (gnl|cdd|29062 : 179.0) no description available & (reliability: 1238.0) & (original description: Putative At1g09160, Description = Probable protein phosphatase 2C 5, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf07086_9492-17006' '(at1g02970 : 531.0) Protein kinase that negatively regulates the entry into mitosis.; WEE1 kinase homolog (WEE1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G19110.2); Has 100256 Blast hits to 98965 proteins in 4396 species: Archae - 165; Bacteria - 12308; Metazoa - 39873; Fungi - 10996; Plants - 18240; Viruses - 408; Other Eukaryotes - 18266 (source: NCBI BLink). & (gnl|cdd|35821 : 249.0) no description available & (gnl|cdd|84488 : 181.0) no description available & (reliability: 1062.0) & (original description: Putative wee1, Description = Putative WEE1 kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf07119_50862-59645' '(at3g46920 : 456.0) Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT1G79570.1); Has 114688 Blast hits to 113328 proteins in 4810 species: Archae - 114; Bacteria - 11620; Metazoa - 44899; Fungi - 9603; Plants - 31346; Viruses - 418; Other Eukaryotes - 16688 (source: NCBI BLink). & (gnl|cdd|35413 : 255.0) no description available & (gnl|cdd|87344 : 200.0) no description available & (q8lkz1|nork_pea : 96.3) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 912.0) & (original description: Putative STY2, Description = Serine/threonine-protein kinase CTR1, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf07123_58526-66154' '(at5g21170 : 281.0) Encodes AKINbeta1, a subunit of the SnRK1 kinase (Sucrose non-fermenting-1-related protein kinase). Involved in regulation of nitrogen and sugar metabolism.; AKINBETA1; FUNCTIONS IN: AMP-activated protein kinase activity; INVOLVED IN: N-terminal protein myristoylation, cellular response to nitrogen levels; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 5-AMP-activated protein kinase, beta subunit, interaction domain (InterPro:IPR006828); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase beta-2 subunit protein (TAIR:AT4G16360.3); Has 674 Blast hits to 666 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 246; Fungi - 149; Plants - 202; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|36829 : 157.0) no description available & (gnl|cdd|86718 : 106.0) no description available & (reliability: 562.0) & (original description: Putative KINB1, Description = SNF1-related protein kinase regulatory subunit beta-1, PFAM = PF16561;PF04739)' T '29.4' 'protein.postranslational modification' 'niben101scf07137_197809-208332' '(at3g03940 : 1172.0) Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT5G18190.1); Has 16177 Blast hits to 16113 proteins in 1419 species: Archae - 20; Bacteria - 5310; Metazoa - 4811; Fungi - 1519; Plants - 1815; Viruses - 223; Other Eukaryotes - 2479 (source: NCBI BLink). & (gnl|cdd|36379 : 248.0) no description available & (gnl|cdd|84488 : 109.0) no description available & (reliability: 2344.0) & (original description: Putative BnaA10g16650D, Description = BnaA10g16650D protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf07152_169454-175692' '(gnl|cdd|85563 : 639.0) no description available & (at3g09880 : 617.0) Encodes B' regulatory subunit of PP2A (AtB'beta).; ATB' BETA; FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: protein phosphatase type 2A complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT5G03470.1); Has 1186 Blast hits to 1156 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 571; Fungi - 167; Plants - 302; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink). & (gnl|cdd|37296 : 600.0) no description available & (reliability: 1234.0) & (original description: Putative Sb06g020625, Description = Putative uncharacterized protein Sb06g020625, PFAM = PF01603)' T '29.4' 'protein.postranslational modification' 'niben101scf07168_351763-363066' '(at4g15900 : 702.0) Mutations confer hypersensitivity to glucose and sucrose and augments sensitivity to cytokinin, ethylene, ABA and auxin. Encodes a nuclear WD40 protein that is imported into the nucleus. Essential for plant innate immunity. Interacts with MOS4 and AtCDC5. It is also predicted to have two DWD motifs. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase, and may affect the stability of AKIN10.; pleiotropic regulatory locus 1 (PRL1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G16650.1); Has 84704 Blast hits to 34179 proteins in 878 species: Archae - 64; Bacteria - 9610; Metazoa - 34201; Fungi - 18356; Plants - 10881; Viruses - 0; Other Eukaryotes - 11592 (source: NCBI BLink). & (gnl|cdd|35506 : 640.0) no description available & (gnl|cdd|29257 : 250.0) no description available & (p93107|pf20_chlre : 113.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1368.0) & (original description: Putative PRL1, Description = Protein pleiotropic regulatory locus 1, PFAM = PF00400;PF00400;PF00400;PF00400)' T '29.4' 'protein.postranslational modification' 'niben101scf07182_22064-40539' '(at3g13670 : 1036.0) Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT2G25760.1); Has 17131 Blast hits to 17075 proteins in 1486 species: Archae - 12; Bacteria - 5943; Metazoa - 4767; Fungi - 1425; Plants - 2358; Viruses - 214; Other Eukaryotes - 2412 (source: NCBI BLink). & (gnl|cdd|36379 : 241.0) no description available & (gnl|cdd|29142 : 113.0) no description available & (reliability: 2072.0) & (original description: Putative At3g13670, Description = Casein kinase-like protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf07247_149999-157958' '(at1g53050 : 924.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G09600.1); Has 124596 Blast hits to 123234 proteins in 4130 species: Archae - 92; Bacteria - 13981; Metazoa - 46101; Fungi - 12764; Plants - 31065; Viruses - 453; Other Eukaryotes - 20140 (source: NCBI BLink). & (gnl|cdd|35820 : 653.0) no description available & (gnl|cdd|29142 : 257.0) no description available & (q05006|cdc22_medsa : 217.0) Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Medicago sativa (Alfalfa) & (reliability: 1848.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf07296_127283-132927' '(at1g47380 : 686.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G68410.2); Has 5162 Blast hits to 5161 proteins in 415 species: Archae - 0; Bacteria - 290; Metazoa - 1152; Fungi - 442; Plants - 2230; Viruses - 7; Other Eukaryotes - 1041 (source: NCBI BLink). & (gnl|cdd|35917 : 180.0) no description available & (gnl|cdd|29062 : 177.0) no description available & (reliability: 1372.0) & (original description: Putative Os02g0567200, Description = Probable protein phosphatase 2C 15, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf07339_240423-254765' '(at4g35780 : 503.0) ACT-like protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Amino acid-binding ACT (InterPro:IPR002912), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ACT-like protein tyrosine kinase family protein (TAIR:AT2G17700.1); Has 132714 Blast hits to 130570 proteins in 5062 species: Archae - 147; Bacteria - 14500; Metazoa - 50865; Fungi - 12053; Plants - 33999; Viruses - 512; Other Eukaryotes - 20638 (source: NCBI BLink). & (gnl|cdd|35413 : 153.0) no description available & (gnl|cdd|87344 : 148.0) no description available & (q8lkz1|nork_pea : 80.5) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 1006.0) & (original description: Putative ACTK, Description = Serine/threonine-protein kinase HT1, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf07355_184348-190950' '(at1g07160 : 276.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: chloroplast, protein serine/threonine phosphatase complex; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G30020.1); Has 7376 Blast hits to 7203 proteins in 674 species: Archae - 10; Bacteria - 746; Metazoa - 1767; Fungi - 814; Plants - 2696; Viruses - 11; Other Eukaryotes - 1332 (source: NCBI BLink). & (gnl|cdd|35917 : 238.0) no description available & (gnl|cdd|29062 : 236.0) no description available & (reliability: 552.0) & (original description: Putative Sb05g007150, Description = Putative uncharacterized protein Sb05g007150, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf07365_154937-157968' '(at4g21860 : 224.0) methionine sulfoxide reductase B 2 (MSRB2); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B3 (TAIR:AT4G04800.1). & (gnl|cdd|36074 : 205.0) no description available & (gnl|cdd|85585 : 181.0) no description available & (reliability: 448.0) & (original description: Putative msr1, Description = Peptide-methionine (R)-S-oxide reductase, PFAM = PF01641)' T '29.4' 'protein.postranslational modification' 'niben101scf07393_83370-103302' '(at3g53030 : 714.0) Encodes a protein kinase SRPK4 that specifically targets Arabidopsis Ser/Arg-rich (SR) slicing factors involved in RNA metabolism. In vitro kinase assay showed that SRPK4 phosphorylates the SR protein RSp31.; ser/arg-rich protein kinase 4 (SRPK4); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: response to oxidative stress, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G44850.1); Has 38460 Blast hits to 29477 proteins in 1034 species: Archae - 2; Bacteria - 1392; Metazoa - 15648; Fungi - 7270; Plants - 6510; Viruses - 16; Other Eukaryotes - 7622 (source: NCBI BLink). & (gnl|cdd|36504 : 673.0) no description available & (gnl|cdd|47550 : 104.0) no description available & (reliability: 1428.0) & (original description: Putative dsk1, Description = Protein kinase dsk1, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf07402_1790-8212' '(at1g62400 : 611.0) high leaf temperature 1 (HT1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G58950.1); Has 132835 Blast hits to 130849 proteins in 5233 species: Archae - 136; Bacteria - 14325; Metazoa - 51137; Fungi - 12092; Plants - 33829; Viruses - 555; Other Eukaryotes - 20761 (source: NCBI BLink). & (gnl|cdd|35413 : 302.0) no description available & (gnl|cdd|47549 : 238.0) no description available & (q8lpb4|pskr_dauca : 110.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1222.0) & (original description: Putative HT1, Description = Serine/threonine-protein kinase HT1, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf07404_521418-525301' '(at4g14480 : 467.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G14720.1); Has 121171 Blast hits to 119626 proteins in 3383 species: Archae - 90; Bacteria - 13775; Metazoa - 44497; Fungi - 12077; Plants - 30839; Viruses - 477; Other Eukaryotes - 19416 (source: NCBI BLink). & (gnl|cdd|35802 : 392.0) no description available & (gnl|cdd|29142 : 241.0) no description available & (q5qn75|m2k1_orysa : 110.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 934.0) & (original description: Putative BLUS1, Description = Serine/threonine-protein kinase BLUS1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf07423_302027-304458' '(at2g28060 : 131.0) 5'-AMP-activated protein kinase beta-2 subunit protein; CONTAINS InterPro DOMAIN/s: 5-AMP-activated protein kinase, beta subunit, interaction domain (InterPro:IPR006828); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase beta-2 subunit protein (TAIR:AT5G21170.2); Has 379 Blast hits to 379 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 199; Fungi - 21; Plants - 141; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|86718 : 87.7) no description available & (reliability: 262.0) & (original description: Putative KINB3, Description = SNF1-related protein kinase regulatory subunit beta-3, PFAM = PF04739)' T '29.4' 'protein.postranslational modification' 'niben101scf07424_223429-241622' '(gnl|cdd|35820 : 302.0) no description available & (at1g54610 : 267.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G05050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29142 : 161.0) no description available & (q38772|cdc2a_antma : 158.0) Cell division control protein 2 homolog A (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (reliability: 532.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf07438_379931-384441' '(gnl|cdd|39379 : 179.0) no description available & (at5g13530 : 129.0) Encodes KEEP ON GOING (KEG), a RING E3 ligase involved in abscisic acid signaling. KEG is essential for Arabidopsis growth and development. ABA promotes KEG degradation via the ubiquitin dependent 26S proteasome pathway.; KEEP ON GOING (KEG); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Ankyrin repeat-containing domain (InterPro:IPR020683), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G32250.3). & (gnl|cdd|29261 : 119.0) no description available & (q8vyx2|akt1_orysa : 82.4) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 258.0) & (original description: Putative PAM1, Description = Penetration and arbuscule morphogenesis protein, PFAM = PF12796;PF12796;PF12796;PF12796;PF00635)' T '29.4' 'protein.postranslational modification' 'niben101scf07459_27290-52552' '(at1g01140 : 664.0) Encodes a CBL-interacting protein kinase with similarity to SOS2; CBL-interacting protein kinase 9 (CIPK9); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 23 (TAIR:AT1G30270.1); Has 130572 Blast hits to 128490 proteins in 4426 species: Archae - 165; Bacteria - 15544; Metazoa - 48044; Fungi - 13206; Plants - 31490; Viruses - 522; Other Eukaryotes - 21601 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 576.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 347.0) no description available & (gnl|cdd|29142 : 282.0) no description available & (reliability: 1328.0) & (original description: Putative CIPK9, Description = CBL-interacting serine/threonine-protein kinase 9, PFAM = PF03822;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf07477_245382-254645' '(at2g37840 : 681.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, putative (InterPro:IPR020655), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G53930.2); Has 51534 Blast hits to 51036 proteins in 1321 species: Archae - 36; Bacteria - 3205; Metazoa - 22459; Fungi - 6825; Plants - 7556; Viruses - 105; Other Eukaryotes - 11348 (source: NCBI BLink). & (gnl|cdd|35815 : 346.0) no description available & (gnl|cdd|47550 : 290.0) no description available & (q75v57|sapk9_orysa : 139.0) Serine/threonine-protein kinase SAPK9 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 9) - Oryza sativa (Rice) & (reliability: 1362.0) & (original description: Putative ATG1C, Description = Serine/threonine-protein kinase ATG1c, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf07511_243328-249661' '(at2g22560 : 526.0) Kinase interacting (KIP1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT5G10500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71206 : 121.0) no description available & (reliability: 1026.0) & (original description: Putative KIP1, Description = Kinase-interacting protein 1, PFAM = PF07765)' T '29.4' 'protein.postranslational modification' 'niben101scf07532_315641-318078' '(at1g12310 : 247.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, nucleus, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G62820.1); Has 15156 Blast hits to 13043 proteins in 1439 species: Archae - 0; Bacteria - 35; Metazoa - 6065; Fungi - 3861; Plants - 3197; Viruses - 0; Other Eukaryotes - 1998 (source: NCBI BLink). & (p27164|calm3_pethy : 134.0) Calmodulin-related protein - Petunia hybrida (Petunia) & (gnl|cdd|35250 : 117.0) no description available & (gnl|cdd|34727 : 108.0) no description available & (reliability: 494.0) & (original description: Putative CML13, Description = Probable calcium-binding protein CML13, PFAM = PF13405;PF13499)' T '29.4' 'protein.postranslational modification' 'niben101scf07533_83609-95063' '(at2g04550 : 322.0) Encodes a protein phosphatase that interacts with MPK12, but not with other MAP kinases. It can dephosphorylate a dually phosphorylated MPK12 in vitro and can inactivate MPK12 in vivo. ibr5 mutants have reduced sensitivity to auxin and abscisic acid. IBR5 promotes auxin responses, including auxin-inducible transcription, differently than the TIR1 auxin receptor and without destabilizing Aux/IAA repressor proteins.; indole-3-butyric acid response 5 (IBR5); CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: dual specificity protein phosphatase 1 (TAIR:AT3G23610.2); Has 3359 Blast hits to 3359 proteins in 285 species: Archae - 9; Bacteria - 32; Metazoa - 1975; Fungi - 228; Plants - 239; Viruses - 200; Other Eukaryotes - 676 (source: NCBI BLink). & (gnl|cdd|29029 : 134.0) no description available & (gnl|cdd|36928 : 127.0) no description available & (reliability: 644.0) & (original description: Putative IBR5, Description = Protein-tyrosine-phosphatase IBR5, PFAM = PF00782)' T '29.4' 'protein.postranslational modification' 'niben101scf07584_187688-193490' '(at5g50000 : 670.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G01490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35413 : 319.0) no description available & (gnl|cdd|87344 : 231.0) no description available & (p17801|kpro_maize : 95.1) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 1340.0) & (original description: Putative DR01, Description = Protein kinase family protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf07616_72549-79960' '(at5g63650 : 564.0) encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress.; SNF1-related protein kinase 2.5 (SNRK2.5); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: SNF1-related protein kinase 2.1 (TAIR:AT5G08590.1); Has 132292 Blast hits to 116481 proteins in 3406 species: Archae - 169; Bacteria - 13418; Metazoa - 52934; Fungi - 13701; Plants - 25794; Viruses - 1077; Other Eukaryotes - 25199 (source: NCBI BLink). & (q7xqp4|sapk7_orysa : 561.0) Serine/threonine-protein kinase SAPK7 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 7) - Oryza sativa (Rice) & (gnl|cdd|35803 : 309.0) no description available & (gnl|cdd|29142 : 269.0) no description available & (reliability: 1128.0) & (original description: Putative SAPK7, Description = Serine/threonine-protein kinase SAPK7, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf07631_13234-18240' '(gnl|cdd|35820 : 486.0) no description available & (at1g54610 : 434.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G05050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29142 : 265.0) no description available & (q38772|cdc2a_antma : 221.0) Cell division control protein 2 homolog A (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (reliability: 860.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf07664_130126-137979' '(at5g63870 : 607.0) Encodes a nuclear localized serine/threonine phosphatase that appears to be regulated by redox activity and is a positive regulator of cryptochrome mediated blue light signalling.; serine/threonine phosphatase 7 (PP7); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: hydrolases;protein serine/threonine phosphatases (TAIR:AT1G48120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35597 : 280.0) no description available & (gnl|cdd|29063 : 227.0) no description available & (o04860|pp2a5_tobac : 138.0) Serine/threonine-protein phosphatase PP2A-5 catalytic subunit (EC 3.1.3.16) - Nicotiana tabacum (Common tobacco) & (reliability: 1214.0) & (original description: Putative PP7, Description = Serine/threonine-protein phosphatase 7, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'niben101scf07672_80402-86305' '(at5g59010 : 684.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT3G54030.1); Has 21140 Blast hits to 20932 proteins in 637 species: Archae - 6; Bacteria - 562; Metazoa - 1681; Fungi - 205; Plants - 18085; Viruses - 31; Other Eukaryotes - 570 (source: NCBI BLink). & (gnl|cdd|36401 : 177.0) no description available & (gnl|cdd|47549 : 95.2) no description available & (o24585|cri4_maize : 88.6) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 1302.0) & (original description: Putative BSK2, Description = Putative serine/threonine-protein kinase, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf07743_1-2684' '(at5g67080 : 327.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 19 (MAPKKK19); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, LP.06 six leaves visible, M germinated pollen stage, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 20 (TAIR:AT3G50310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35419 : 254.0) no description available & (gnl|cdd|29142 : 228.0) no description available & (q336x9|mpk6_orysa : 106.0) Mitogen-activated protein kinase 6 (EC 2.7.11.24) (MAP kinase 6) - Oryza sativa (Rice) & (reliability: 654.0) & (original description: Putative MAPKKK19, Description = Mitogen-activated protein kinase kinase kinase 19, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf07757_19933-25157' '(at3g62260 : 433.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G48040.1); Has 7565 Blast hits to 7530 proteins in 876 species: Archae - 12; Bacteria - 1215; Metazoa - 1621; Fungi - 781; Plants - 2594; Viruses - 9; Other Eukaryotes - 1333 (source: NCBI BLink). & (gnl|cdd|35917 : 241.0) no description available & (gnl|cdd|29062 : 231.0) no description available & (reliability: 866.0) & (original description: Putative At3g62260, Description = Probable protein phosphatase 2C 49, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf07778_134407-140336' '(at3g52890 : 666.0) KCBP-interacting protein kinase interacts specifically with the tail region of KCBP; KCBP-interacting protein kinase (KIPK); FUNCTIONS IN: protein binding, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G36350.1); Has 124693 Blast hits to 89359 proteins in 3581 species: Archae - 52; Bacteria - 15752; Metazoa - 49633; Fungi - 14477; Plants - 20322; Viruses - 421; Other Eukaryotes - 24036 (source: NCBI BLink). & (gnl|cdd|35830 : 617.0) no description available & (p47997|g11a_orysa : 523.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 172.0) no description available & (reliability: 1332.0) & (original description: Putative Os12g0480200, Description = Os12g0480200 protein, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf07788_389737-394649' '(p15792|kpk1_phavu : 728.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|35830 : 656.0) no description available & (at3g27580 : 655.0) a member of a subfamily of Ser/Thr PKs in plants.; ATPK7; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 2 (TAIR:AT5G47750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|47550 : 227.0) no description available & (reliability: 1310.0) & (original description: Putative Adi3, Description = Protein kinase G11A, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf07788_490636-493691' '(at3g27560 : 277.0) encodes a protein with kinase domains, including catalytic domains for serine/threonine as well as tyrosine kinases. a member of multi-gene family and is expressed in all tissues examined.; ATN1; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein serine/threonine kinase activity, protein tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase, ATN1-like (InterPro:IPR015784), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G40540.1); Has 126902 Blast hits to 125519 proteins in 4868 species: Archae - 154; Bacteria - 14147; Metazoa - 47911; Fungi - 11907; Plants - 32573; Viruses - 495; Other Eukaryotes - 19715 (source: NCBI BLink). & (gnl|cdd|35413 : 149.0) no description available & (gnl|cdd|29142 : 112.0) no description available & (reliability: 554.0) & (original description: Putative pk1, Description = Serine/threonine-protein kinase HT1, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf07790_307299-319261' '(at1g61850 : 1763.0) Encodes a non-specific lipase that hydrolyzes phospholipids as well as galactolipids, at both sn-1 and sn-2 positions. Involved in basal jasmonic acid biosynthesis by releasing the precursor fatty acid from membrane lipids. Mutant plants were impacted in resistance to fungus B. cinerea.; phospholipases;galactolipases; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 2 (TAIR:AT3G26500.1). & (gnl|cdd|39432 : 807.0) no description available & (gnl|cdd|85637 : 105.0) no description available & (reliability: 3526.0) & (original description: Putative PLA1, Description = Phospholipase A I, PFAM = PF00514;PF01734;PF13855)' T '29.4' 'protein.postranslational modification' 'niben101scf07939_88409-96332' '(at4g31170 : 650.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G24360.1). & (gnl|cdd|35413 : 318.0) no description available & (gnl|cdd|87344 : 238.0) no description available & (q6x4a2|cipk1_orysa : 117.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1300.0) & (original description: Putative DPK1, Description = Os08g0224100 protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf07951_318075-322082' '(at3g08760 : 544.0) Encodes an osmotic stress-inducible kinase that functions as a negative regulator of osmotic stress signaling in plants.; ATSIK; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G15080.1); Has 42849 Blast hits to 42385 proteins in 1619 species: Archae - 20; Bacteria - 2695; Metazoa - 11858; Fungi - 1356; Plants - 23776; Viruses - 143; Other Eukaryotes - 3001 (source: NCBI BLink). & (gnl|cdd|36401 : 243.0) no description available & (q8l4h4|nork_medtr : 129.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 111.0) no description available & (reliability: 1088.0) & (original description: Putative Os01g0822200, Description = Os01g0822200 protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf07953_366724-375093' '(at1g53050 : 641.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G09600.1); Has 124596 Blast hits to 123234 proteins in 4130 species: Archae - 92; Bacteria - 13981; Metazoa - 46101; Fungi - 12764; Plants - 31065; Viruses - 453; Other Eukaryotes - 20140 (source: NCBI BLink). & (gnl|cdd|35820 : 617.0) no description available & (gnl|cdd|29142 : 256.0) no description available & (q05006|cdc22_medsa : 228.0) Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Medicago sativa (Alfalfa) & (reliability: 1282.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf08011_240215-261630' '(at2g40730 : 1071.0) Protein kinase family protein with ARM repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-like helical (InterPro:IPR011989), Serine/threonine-protein kinase domain (InterPro:IPR002290), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G71410.1); Has 4566 Blast hits to 2083 proteins in 348 species: Archae - 0; Bacteria - 278; Metazoa - 876; Fungi - 585; Plants - 192; Viruses - 19; Other Eukaryotes - 2616 (source: NCBI BLink). & (gnl|cdd|36457 : 547.0) no description available & (reliability: 2142.0) & (original description: Putative NTKL, Description = NTKL, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf08026_303747-314428' '(at2g46920 : 543.0) Pol mutations are recessive, partial suppressors of meristem defects in strong clv1 and clv3 mutants, and nearly complete suppressors of weak clv1 mutants. Single mutants appear normal. Acts downstream of the CLV signaling pathway in meristem development and is required together with PLL1 for stem-cell maintenance through the regulation of WUS.; poltergeist (POL); FUNCTIONS IN: phospholipid binding, protein serine/threonine phosphatase activity; INVOLVED IN: protein myristoylation, regulation of meristem structural organization, protein palmitoylation, regulation of transcription, maintenance of meristem identity; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: poltergeist like 1 (TAIR:AT2G35350.1); Has 1941 Blast hits to 1802 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 375; Fungi - 295; Plants - 1017; Viruses - 0; Other Eukaryotes - 254 (source: NCBI BLink). & (gnl|cdd|35919 : 278.0) no description available & (gnl|cdd|29062 : 121.0) no description available & (reliability: 998.0) & (original description: Putative PLL1, Description = Protein phosphatase 2C 29, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf08029_105965-114902' '(at1g05000 : 296.0) Phosphotyrosine protein phosphatases superfamily protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic (InterPro:IPR020428), Protein-tyrosine phosphatase, SIW14-like (InterPro:IPR004861); BEST Arabidopsis thaliana protein match is: Phosphotyrosine protein phosphatases superfamily protein (TAIR:AT2G32960.1); Has 580 Blast hits to 572 proteins in 119 species: Archae - 0; Bacteria - 14; Metazoa - 1; Fungi - 314; Plants - 145; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|36785 : 254.0) no description available & (gnl|cdd|86260 : 208.0) no description available & (reliability: 592.0) & (original description: Putative PTP, Description = Tyrosine-protein phosphatase, PFAM = PF03162)' T '29.4' 'protein.postranslational modification' 'niben101scf08054_80447-85143' '(at5g35370 : 969.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-2 5 (TAIR:AT4G32300.1); Has 120687 Blast hits to 119102 proteins in 4782 species: Archae - 112; Bacteria - 13256; Metazoa - 44443; Fungi - 10300; Plants - 34517; Viruses - 382; Other Eukaryotes - 17677 (source: NCBI BLink). & (gnl|cdd|36401 : 323.0) no description available & (p17801|kpro_maize : 282.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 171.0) no description available & (reliability: 1938.0) & (original description: Putative At5g35370, Description = G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370, PFAM = PF00069;PF01453)' T '29.4' 'protein.postranslational modification' 'niben101scf08088_431298-446113' '(at1g29370 : 343.0) Kinase-related protein of unknown function (DUF1296); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1296 (InterPro:IPR009719); BEST Arabidopsis thaliana protein match is: Kinase-related protein of unknown function (DUF1296) (TAIR:AT1G29350.1); Has 14234 Blast hits to 8102 proteins in 480 species: Archae - 0; Bacteria - 599; Metazoa - 5712; Fungi - 1715; Plants - 1064; Viruses - 60; Other Eukaryotes - 5084 (source: NCBI BLink). & (gnl|cdd|70439 : 99.3) no description available & (reliability: 686.0) & (original description: Putative At1g29350, Description = Kinase-related protein, PFAM = PF06972)' T '29.4' 'protein.postranslational modification' 'niben101scf08150_77580-81676' '(at2g30020 : 356.0) Encodes AP2C1. Belongs to the clade B of the PP2C-superfamily. Acts as a MAPK phosphatase that negatively regulates MPK4 and MPK6.; Protein phosphatase 2C family protein; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G07160.1); Has 6969 Blast hits to 6779 proteins in 496 species: Archae - 2; Bacteria - 405; Metazoa - 1770; Fungi - 794; Plants - 2680; Viruses - 9; Other Eukaryotes - 1309 (source: NCBI BLink). & (gnl|cdd|35917 : 255.0) no description available & (gnl|cdd|29062 : 248.0) no description available & (reliability: 712.0) & (original description: Putative NbP2C, Description = Protein phosphatase 2C, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf08228_401296-408800' '(at1g04700 : 520.0) PB1 domain-containing protein tyrosine kinase; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT3G24715.1); Has 117644 Blast hits to 116217 proteins in 4946 species: Archae - 115; Bacteria - 12372; Metazoa - 45570; Fungi - 9947; Plants - 31841; Viruses - 450; Other Eukaryotes - 17349 (source: NCBI BLink). & (gnl|cdd|35413 : 301.0) no description available & (gnl|cdd|87344 : 242.0) no description available & (q8lpb4|pskr_dauca : 97.1) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1040.0) & (original description: Putative STY2, Description = Serine/threonine-protein kinase CTR1, PFAM = PF00564;PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf08341_16093-22555' '(at3g16030 : 388.0) CALLUS EXPRESSION OF RBCS 101 (CES101); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT4G21390.1); Has 121576 Blast hits to 119500 proteins in 4422 species: Archae - 101; Bacteria - 13477; Metazoa - 44302; Fungi - 10440; Plants - 35232; Viruses - 450; Other Eukaryotes - 17574 (source: NCBI BLink). & (gnl|cdd|36401 : 338.0) no description available & (q8lkz1|nork_pea : 207.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 171.0) no description available & (reliability: 776.0) & (original description: Putative CES101, Description = G-type lectin S-receptor-like serine/threonine-protein kinase CES101, PFAM = PF01453;PF08276;PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf08341_29698-36234' '(at4g21390 : 476.0) B120; FUNCTIONS IN: protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61610.1); Has 119638 Blast hits to 117946 proteins in 4361 species: Archae - 104; Bacteria - 13356; Metazoa - 43759; Fungi - 9937; Plants - 34742; Viruses - 415; Other Eukaryotes - 17325 (source: NCBI BLink). & (gnl|cdd|36401 : 334.0) no description available & (q8lkz1|nork_pea : 205.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 174.0) no description available & (reliability: 904.0) & (original description: Putative CES101, Description = Cysteine-rich RLK (Receptor-like kinase) protein, PFAM = PF01453;PF07714;PF08276)' T '29.4' 'protein.postranslational modification' 'niben101scf08341_367866-373255' '(at5g25510 : 609.0) Protein phosphatase 2A regulatory B subunit family protein; FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: chloroplast, protein phosphatase type 2A complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT4G15415.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85563 : 601.0) no description available & (gnl|cdd|37296 : 521.0) no description available & (reliability: 1218.0) & (original description: Putative B'IOTA, Description = Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform, PFAM = PF01603)' T '29.4' 'protein.postranslational modification' 'niben101scf08426_33047-38961' '(at3g01490 : 626.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G50000.1); Has 129107 Blast hits to 127633 proteins in 4815 species: Archae - 144; Bacteria - 13952; Metazoa - 48674; Fungi - 11933; Plants - 33456; Viruses - 637; Other Eukaryotes - 20311 (source: NCBI BLink). & (gnl|cdd|35413 : 310.0) no description available & (gnl|cdd|87344 : 223.0) no description available & (q8l4h4|nork_medtr : 94.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1252.0) & (original description: Putative DR01, Description = Protein kinase family protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf08430_41080-53774' '(at1g63500 : 567.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G41260.1); Has 34543 Blast hits to 34010 proteins in 1386 species: Archae - 8; Bacteria - 2627; Metazoa - 7585; Fungi - 183; Plants - 22470; Viruses - 98; Other Eukaryotes - 1572 (source: NCBI BLink). & (gnl|cdd|36401 : 112.0) no description available & (reliability: 1134.0) & (original description: Putative BnaCnng45960D, Description = BnaCnng45960D protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf08566_246101-257711' '(at1g34750 : 425.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: phytochrome-associated protein phosphatase type 2C (TAIR:AT1G22280.1); Has 7616 Blast hits to 7609 proteins in 922 species: Archae - 14; Bacteria - 1457; Metazoa - 1483; Fungi - 777; Plants - 2623; Viruses - 11; Other Eukaryotes - 1251 (source: NCBI BLink). & (gnl|cdd|35917 : 247.0) no description available & (gnl|cdd|29062 : 236.0) no description available & (reliability: 850.0) & (original description: Putative At1g34750, Description = Probable protein phosphatase 2C 10, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf08586_593221-608676' '(at1g73660 : 1033.0) Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance.; protein tyrosine kinase family protein; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Ubiquitin interacting motif (InterPro:IPR003903), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18160.1); Has 126827 Blast hits to 124278 proteins in 4857 species: Archae - 98; Bacteria - 13376; Metazoa - 48156; Fungi - 11388; Plants - 33654; Viruses - 503; Other Eukaryotes - 19652 (source: NCBI BLink). & (gnl|cdd|35413 : 335.0) no description available & (gnl|cdd|87344 : 257.0) no description available & (q8lpb4|pskr_dauca : 102.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 2066.0) & (original description: Putative BnaA07g31020D, Description = BnaA07g31020D protein, PFAM = PF14381;PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf08652_174700-205004' '(at4g24100 : 813.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G10730.1); Has 125358 Blast hits to 123605 proteins in 4454 species: Archae - 114; Bacteria - 14309; Metazoa - 46798; Fungi - 12057; Plants - 31507; Viruses - 632; Other Eukaryotes - 19941 (source: NCBI BLink). & (gnl|cdd|35802 : 495.0) no description available & (gnl|cdd|29142 : 260.0) no description available & (q5qn75|m2k1_orysa : 120.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1626.0) & (original description: Putative MAP4K4, Description = MAP kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf08672_274689-279731' '(at1g32640 : 509.0) Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif. Its transcription is induced by dehydration stress and ABA treatment. Negative regulator of blue lightñmediated photomorphogenic growth and blue and far-red-lightñregulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression.; MYC2; FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 13 processes; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: Basic helix-loop-helix (bHLH) DNA-binding family protein (TAIR:AT4G17880.1); Has 4078 Blast hits to 3762 proteins in 672 species: Archae - 2; Bacteria - 2; Metazoa - 761; Fungi - 108; Plants - 3150; Viruses - 25; Other Eukaryotes - 30 (source: NCBI BLink). & (p13526|arlc_maize : 94.7) Anthocyanin regulatory Lc protein - Zea mays (Maize) & (reliability: 1018.0) & (original description: Putative myc2, Description = MYC2, PFAM = PF00010;PF14215)' T '29.4' 'protein.postranslational modification' 'niben101scf08724_45937-49121' '(at2g30020 : 380.0) Encodes AP2C1. Belongs to the clade B of the PP2C-superfamily. Acts as a MAPK phosphatase that negatively regulates MPK4 and MPK6.; Protein phosphatase 2C family protein; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G07160.1); Has 6969 Blast hits to 6779 proteins in 496 species: Archae - 2; Bacteria - 405; Metazoa - 1770; Fungi - 794; Plants - 2680; Viruses - 9; Other Eukaryotes - 1309 (source: NCBI BLink). & (gnl|cdd|35917 : 249.0) no description available & (gnl|cdd|29062 : 243.0) no description available & (reliability: 760.0) & (original description: Putative At2g30020, Description = Probable protein phosphatase 2C 25, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf08762_14910-36907' '(at5g60550 : 526.0) Encodes a geminivirus Rep interacting kinase (GRIK; GRIK1/AT3G45240, GRIK2/AT5G60550). GRIKs are SnRK1 (SNF1-related kinases) activating kinases. Both GRIKs specifically bind to the SnRK1 catalytic subunit and phosphorylate the equivalent threonine residue in its activation loop in vitro.; geminivirus rep interacting kinase 2 (GRIK2); CONTAINS InterPro DOMAIN/s: Calcium/calmodulin-dependent protein kinase kinase (InterPro:IPR020657), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: geminivirus rep interacting kinase 1 (TAIR:AT3G45240.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35805 : 378.0) no description available & (gnl|cdd|29142 : 240.0) no description available & (q75v57|sapk9_orysa : 146.0) Serine/threonine-protein kinase SAPK9 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 9) - Oryza sativa (Rice) & (reliability: 1052.0) & (original description: Putative GRIK2, Description = Serine/threonine-protein kinase GRIK2, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf08806_304421-340009' '(gnl|cdd|85563 : 721.0) no description available & (at3g26020 : 714.0) Encodes protein phosphatase 2A (PP2A) B'eta subunit. Targeted to nucleus and cytosol.; Protein phosphatase 2A regulatory B subunit family protein; FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: cytosol, nucleus, protein phosphatase type 2A complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT1G13460.2); Has 1197 Blast hits to 1175 proteins in 189 species: Archae - 0; Bacteria - 2; Metazoa - 578; Fungi - 161; Plants - 301; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|37296 : 651.0) no description available & (reliability: 1428.0) & (original description: Putative B'ETA, Description = Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform, PFAM = PF01603)' T '29.4' 'protein.postranslational modification' 'niben101scf08832_13787-20209' '(at4g18710 : 729.0) ATSK (shaggy-like kinase) family member that encodes an AtSK protein involved in the cross-talk between auxin and brassinosteroid signaling pathways. BR-INSENSITIVE 2 mutant indicated that the BR-insensitive dwarf phenotype was due to a semidominant mutation in the BIN2. BIN2 is not allelic to BRI1. BIN2-mediated phosphorylation appears to promote BZR1 export from the nucleus.; BRASSINOSTEROID-INSENSITIVE 2 (BIN2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: GSK3/SHAGGY-like protein kinase 1 (TAIR:AT1G06390.2). & (q40518|msk1_tobac : 634.0) Shaggy-related protein kinase NtK-1 (EC 2.7.11.1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35877 : 574.0) no description available & (gnl|cdd|29142 : 228.0) no description available & (reliability: 1420.0) & (original description: Putative GSK3B, Description = Glycogen synthase kinase 3 beta variant 4, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf09082_38306-44213' '(at2g30980 : 717.0) Encodes a GSK3-like protein kinase. This protein can interact with the BZR1 protein involved in brassinosteroid-mediated signaling in a Y2H assay and promotes BZR1 phosphorylation in protoplasts.; SHAGGY-related protein kinase dZeta (SKdZeta); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: brassinosteroid mediated signaling pathway, protein amino acid phosphorylation, regulation of protein localization; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: GSK3/SHAGGY-like protein kinase 1 (TAIR:AT1G06390.2); Has 110013 Blast hits to 108778 proteins in 3905 species: Archae - 83; Bacteria - 10808; Metazoa - 40209; Fungi - 11817; Plants - 28363; Viruses - 415; Other Eukaryotes - 18318 (source: NCBI BLink). & (q40518|msk1_tobac : 637.0) Shaggy-related protein kinase NtK-1 (EC 2.7.11.1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35877 : 575.0) no description available & (gnl|cdd|29142 : 232.0) no description available & (reliability: 1434.0) & (original description: Putative ASK9, Description = Shaggy-related protein kinase iota, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf09116_449341-456696' '(at3g23340 : 634.0) casein kinase I-like 10 (ckl10); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase I (TAIR:AT4G14340.1); Has 56550 Blast hits to 56234 proteins in 2232 species: Archae - 39; Bacteria - 9117; Metazoa - 21673; Fungi - 6267; Plants - 8804; Viruses - 331; Other Eukaryotes - 10319 (source: NCBI BLink). & (gnl|cdd|36378 : 480.0) no description available & (gnl|cdd|29142 : 156.0) no description available & (reliability: 1268.0) & (original description: Putative ckl5, Description = Casein kinase I-like protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf09119_2314-12932' '(at1g09020 : 558.0) putative activator subunit of SNF1-related protein kinase; homolog of yeast sucrose nonfermenting 4 (SNF4); CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase-related (TAIR:AT1G27070.1); Has 1379 Blast hits to 1368 proteins in 272 species: Archae - 14; Bacteria - 104; Metazoa - 613; Fungi - 295; Plants - 229; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|73139 : 121.0) no description available & (gnl|cdd|36975 : 119.0) no description available & (reliability: 1116.0) & (original description: Putative SNF4, Description = Sucrose nonfermenting 4-like protein, PFAM = PF16561;PF00571;PF00571)' T '29.4' 'protein.postranslational modification' 'niben101scf09130_521393-526061' '(at1g72770 : 466.0) mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2C; regulates the activation of the Snf1-related kinase OST1 by abscisic acid.; homology to ABI1 (HAB1); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: homology to ABI2 (TAIR:AT1G17550.1). & (gnl|cdd|35917 : 244.0) no description available & (gnl|cdd|29062 : 235.0) no description available & (reliability: 932.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf09141_259954-265187' '(at3g02750 : 357.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G36250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35917 : 217.0) no description available & (gnl|cdd|29062 : 196.0) no description available & (reliability: 714.0) & (original description: Putative At5g01700, Description = Probable protein phosphatase 2C 65, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf09170_14006-22468' '(at1g72770 : 552.0) mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2C; regulates the activation of the Snf1-related kinase OST1 by abscisic acid.; homology to ABI1 (HAB1); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: homology to ABI2 (TAIR:AT1G17550.1). & (gnl|cdd|35917 : 238.0) no description available & (gnl|cdd|29062 : 229.0) no description available & (reliability: 1104.0) & (original description: Putative HAB1, Description = Protein phosphatase 2C 16, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf09170_173850-176794' '(at5g57020 : 510.0) Arabidopsis thaliana myristoyl-CoA:protein N-myristoyltransferase.; myristoyl-CoA:protein N-myristoyltransferase (NMT1); CONTAINS InterPro DOMAIN/s: Myristoyl-CoA:protein N-myristoyltransferase (InterPro:IPR000903), Myristoyl-CoA:protein N-myristoyltransferase, conserved site (InterPro:IPR022678), Myristoyl-CoA:protein N-myristoyltransferase, N-terminal (InterPro:IPR022676), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Myristoyl-CoA:protein N-myristoyltransferase, C-terminal (InterPro:IPR022677); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G44175.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37990 : 475.0) no description available & (gnl|cdd|34695 : 293.0) no description available & (reliability: 1020.0) & (original description: Putative NMT2, Description = Glycylpeptide N-tetradecanoyltransferase, PFAM = PF01233;PF02799)' T '29.4' 'protein.postranslational modification' 'niben101scf09170_279759-293441' '(at1g72710 : 671.0) Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus.; casein kinase 1-like protein 2 (CKL2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase 1 (TAIR:AT4G26100.1); Has 69362 Blast hits to 63919 proteins in 2309 species: Archae - 34; Bacteria - 10202; Metazoa - 23661; Fungi - 6612; Plants - 12027; Viruses - 386; Other Eukaryotes - 16440 (source: NCBI BLink). & (gnl|cdd|36378 : 486.0) no description available & (gnl|cdd|29142 : 159.0) no description available & (reliability: 1342.0) & (original description: Putative ckl5, Description = Casein kinase I-like protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf09203_11568-17690' '(at3g22750 : 595.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G14780.1); Has 129296 Blast hits to 127897 proteins in 4981 species: Archae - 144; Bacteria - 14276; Metazoa - 48853; Fungi - 11933; Plants - 33374; Viruses - 537; Other Eukaryotes - 20179 (source: NCBI BLink). & (gnl|cdd|35413 : 310.0) no description available & (gnl|cdd|87344 : 211.0) no description available & (q8l4h4|nork_medtr : 83.2) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1190.0) & (original description: Putative DR01, Description = Protein kinase family protein, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf09248_839298-842647' '(at5g01820 : 503.0) Encodes a CBL-interacting serine/threonine protein kinase.; serine/threonine protein kinase 1 (SR1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SOS3-interacting protein 4 (TAIR:AT2G30360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 367.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 336.0) no description available & (gnl|cdd|29142 : 292.0) no description available & (reliability: 1006.0) & (original description: Putative CIPK14, Description = CBL-interacting serine/threonine-protein kinase 14, PFAM = PF03822;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf09321_74678-85509' '(at1g17720 : 782.0) type 2A protein serine/threonine phosphatase 55 kDa B; ATB BETA; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Protein phosphatase 2A, regulatory subunit PR55 (InterPro:IPR000009), Protein phosphatase 2A, regulatory subunit PR55, conserved site (InterPro:IPR018067), WD40 repeat, conserved site (InterPro:IPR019775), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform (TAIR:AT1G51690.3); Has 1042 Blast hits to 998 proteins in 278 species: Archae - 0; Bacteria - 71; Metazoa - 509; Fungi - 214; Plants - 122; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (q6z8b7|2abb_orysa : 751.0) Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform (PP2A, subunit B, beta isoform) - Oryza sativa (Rice) & (gnl|cdd|36568 : 627.0) no description available & (gnl|cdd|34770 : 444.0) no description available & (reliability: 1564.0) & (original description: Putative PP2AB2, Description = Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform, PFAM = PF00400;PF00400)' T '29.4' 'protein.postranslational modification' 'niben101scf09331_49966-61797' '(at2g25620 : 513.0) Encodes DBP1, a member of the DBP factors (DNA-binding protein phosphatases) featuring sequence-specific DNA-binding and protein phosphatase activity. DBP1 is involved in plant-potyvirus interactions. Loss-of-function of DBP1 renders resistance to potyviruses.; DNA-binding protein phosphatase 1 (DBP1); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: regulation of defense response to virus; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G33700.1); Has 7196 Blast hits to 7030 proteins in 671 species: Archae - 12; Bacteria - 774; Metazoa - 1729; Fungi - 719; Plants - 2627; Viruses - 7; Other Eukaryotes - 1328 (source: NCBI BLink). & (gnl|cdd|29062 : 239.0) no description available & (gnl|cdd|35917 : 230.0) no description available & (reliability: 1026.0) & (original description: Putative At2g25620, Description = Probable protein phosphatase 2C 22, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf09345_90762-98849' '(at2g17890 : 833.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 16 (CPK16); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 18 (TAIR:AT4G36070.1); Has 126765 Blast hits to 124478 proteins in 3942 species: Archae - 195; Bacteria - 14619; Metazoa - 47448; Fungi - 14527; Plants - 27603; Viruses - 509; Other Eukaryotes - 21864 (source: NCBI BLink). & (p53681|crk_dauca : 446.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 371.0) no description available & (gnl|cdd|29142 : 263.0) no description available & (reliability: 1666.0) & (original description: Putative CPK16, Description = Calcium-dependent protein kinase 16, PFAM = PF00069;PF13499;PF13499)' T '29.4' 'protein.postranslational modification' 'niben101scf09459_235300-239304' '(at3g24110 : 225.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT4G26470.1); Has 7639 Blast hits to 6370 proteins in 881 species: Archae - 1; Bacteria - 23; Metazoa - 3335; Fungi - 878; Plants - 2363; Viruses - 0; Other Eukaryotes - 1039 (source: NCBI BLink). & (gnl|cdd|35250 : 88.2) no description available & (reliability: 406.0) & (original description: Putative CML22, Description = Probable calcium-binding protein CML22, PFAM = PF13499;PF13499)' T '29.4' 'protein.postranslational modification' 'niben101scf09552_10577-21583' '(at1g09840 : 688.0) shaggy-like protein kinase 41 (SK41); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: shaggy-like kinase 42 (TAIR:AT1G57870.2); Has 102931 Blast hits to 101896 proteins in 3684 species: Archae - 93; Bacteria - 10743; Metazoa - 37496; Fungi - 11700; Plants - 24573; Viruses - 362; Other Eukaryotes - 17964 (source: NCBI BLink). & (p51139|msk3_medsa : 604.0) Glycogen synthase kinase-3 homolog MsK-3 (EC 2.7.11.1) - Medicago sativa (Alfalfa) & (gnl|cdd|35877 : 579.0) no description available & (gnl|cdd|29142 : 230.0) no description available & (reliability: 1376.0) & (original description: Putative ASK10, Description = Shaggy-related protein kinase kappa, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf09560_258479-271579' '(at2g35050 : 612.0) Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT1G16270.2); Has 123661 Blast hits to 120809 proteins in 5002 species: Archae - 120; Bacteria - 13694; Metazoa - 47002; Fungi - 10895; Plants - 32616; Viruses - 447; Other Eukaryotes - 18887 (source: NCBI BLink). & (gnl|cdd|35413 : 316.0) no description available & (gnl|cdd|87344 : 249.0) no description available & (q8l4h4|nork_medtr : 110.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1224.0) & (original description: Putative At1g79570, Description = Putative uncharacterized protein At1g79570, PFAM = PF07714;PF00564)' T '29.4' 'protein.postranslational modification' 'niben101scf09603_61383-66325' '(at3g05640 : 471.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: response to water deprivation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G27930.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35917 : 201.0) no description available & (gnl|cdd|29062 : 180.0) no description available & (reliability: 942.0) & (original description: Putative F9H3, Description = Phosphatase 2C family protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf09603_459851-464433' '(at1g09160 : 630.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G68410.2); Has 5570 Blast hits to 5569 proteins in 486 species: Archae - 4; Bacteria - 416; Metazoa - 1194; Fungi - 467; Plants - 2390; Viruses - 7; Other Eukaryotes - 1092 (source: NCBI BLink). & (gnl|cdd|35917 : 188.0) no description available & (gnl|cdd|29062 : 170.0) no description available & (reliability: 1260.0) & (original description: Putative At1g09160, Description = Probable protein phosphatase 2C 5, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf09659_385129-390069' '(at1g48120 : 370.0) hydrolases;protein serine/threonine phosphatases; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Aminotransferase-like, plant mobile domain (InterPro:IPR019557), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: serine/threonine phosphatase 7 (TAIR:AT5G63870.1); Has 7651 Blast hits to 7316 proteins in 444 species: Archae - 82; Bacteria - 281; Metazoa - 2438; Fungi - 1339; Plants - 1824; Viruses - 2; Other Eukaryotes - 1685 (source: NCBI BLink). & (reliability: 740.0) & (original description: Putative At1g48120, Description = Serine/threonine-protein phosphatase 7 long form homolog, PFAM = PF10536)' T '29.4' 'protein.postranslational modification' 'niben101scf09698_257768-264394' '(at2g45490 : 467.0) Encodes a member of a family of Ser/Thr kinases whose activities peak during cell division. Transcripts are abundant in tissues rich in dividing cells like roots and flowers but are low or absent in fully expanded leaves and stems. In interphase cells, the protein is predominantly nuclear. During mitosis, the protein associates with plant-specific cytoskeletal structures (preprophase band, phragmoplast, nascent cell plate) that are necessary for cytokinesis as well as with the microtubule spindle. The protein is concentrated in nuclear dots arranged around the nucleolus and the nuclear periphery in early prophase cells.; ataurora3 (AUR3); CONTAINS InterPro DOMAIN/s: Spindle assembly checkpoint kinase (InterPro:IPR020663), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ataurora1 (TAIR:AT4G32830.1); Has 132422 Blast hits to 130217 proteins in 4585 species: Archae - 167; Bacteria - 15261; Metazoa - 49222; Fungi - 13102; Plants - 32389; Viruses - 552; Other Eukaryotes - 21729 (source: NCBI BLink). & (gnl|cdd|35800 : 393.0) no description available & (gnl|cdd|29142 : 283.0) no description available & (q6x4a2|cipk1_orysa : 199.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 934.0) & (original description: Putative AUR3, Description = Serine/threonine-protein kinase Aurora-3, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf09716_153181-163942' '(at3g25800 : 1081.0) one of three genes encoding the protein phosphatase 2A regulatory subunit; protein phosphatase 2A subunit A2 (PP2AA2); FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: response to cadmium ion, regulation of phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A subunit A3 (TAIR:AT1G13320.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p36875|2aaa_pea : 677.0) Protein phosphatase PP2A regulatory subunit A (PR65) (Fragment) - Pisum sativum (Garden pea) & (gnl|cdd|35432 : 635.0) no description available & (reliability: 2162.0) & (original description: Putative PP2AA2, Description = Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform, PFAM = PF02985;PF13646)' T '29.4' 'protein.postranslational modification' 'niben101scf09788_25666-32683' '(at3g48260 : 573.0) Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases.; with no lysine (K) kinase 3 (WNK3); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 2 (TAIR:AT3G22420.1); Has 106620 Blast hits to 105555 proteins in 3648 species: Archae - 79; Bacteria - 10632; Metazoa - 39040; Fungi - 10406; Plants - 28734; Viruses - 420; Other Eukaryotes - 17309 (source: NCBI BLink). & (gnl|cdd|35804 : 551.0) no description available & (gnl|cdd|29142 : 196.0) no description available & (q5qn75|m2k1_orysa : 97.8) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1146.0) & (original description: Putative zik1, Description = ZIK1 protein, PFAM = PF00069;PF12202)' T '29.4' 'protein.postranslational modification' 'niben101scf09792_208426-216212' '(at4g14340 : 630.0) Phosphorylates serine or threonine residues that are near and C-terminal to acidic side chains on a variety of target proteins; casein kinase I (CKI1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase I-like 10 (TAIR:AT3G23340.1); Has 58467 Blast hits to 58136 proteins in 2224 species: Archae - 39; Bacteria - 9706; Metazoa - 21949; Fungi - 6340; Plants - 9653; Viruses - 309; Other Eukaryotes - 10471 (source: NCBI BLink). & (gnl|cdd|36378 : 481.0) no description available & (gnl|cdd|29142 : 160.0) no description available & (reliability: 1260.0) & (original description: Putative CKL6, Description = Casein kinase 1-like protein 6, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf09792_231502-240670' '(at2g20470 : 746.0) AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: male gametophyte; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT1G03920.1); Has 111387 Blast hits to 110059 proteins in 3981 species: Archae - 150; Bacteria - 13980; Metazoa - 39554; Fungi - 12201; Plants - 25842; Viruses - 438; Other Eukaryotes - 19222 (source: NCBI BLink). & (gnl|cdd|35825 : 705.0) no description available & (gnl|cdd|47550 : 283.0) no description available & (p47997|g11a_orysa : 162.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 1492.0) & (original description: Putative ndrA, Description = Putative uncharacterized protein ndrA, PFAM = PF00069;PF00433)' T '29.4' 'protein.postranslational modification' 'niben101scf09928_156698-160158' '(gnl|cdd|35419 : 244.0) no description available & (at3g50310 : 238.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 20 (MAPKKK20); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 19 (TAIR:AT5G67080.1); Has 114114 Blast hits to 112767 proteins in 3610 species: Archae - 125; Bacteria - 11707; Metazoa - 43224; Fungi - 11427; Plants - 28864; Viruses - 487; Other Eukaryotes - 18280 (source: NCBI BLink). & (gnl|cdd|29142 : 190.0) no description available & (p28582|cdpk_dauca : 86.3) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 476.0) & (original description: Putative MAPKKK15, Description = Mitogen-activated protein kinase kinase kinase A, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf09960_216358-221933' '(at4g24740 : 741.0) a LAMMER-type protein kinase that co-precipitates with serine/arginine-rich (SR) proteins in vitro, interaction modulated by phosphorylation of the proteins.; FUS3-complementing gene 2 (FC2); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: FUS3-complementing gene 1 (TAIR:AT3G53570.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35890 : 524.0) no description available & (gnl|cdd|47550 : 198.0) no description available & (p23111|cdc2_maize : 110.0) Cell division control protein 2 homolog (EC 2.7.11.22) (EC 2.7.11.23) (p34cdc2) - Zea mays (Maize) & (reliability: 1482.0) & (original description: Putative AFC2, Description = Serine/threonine-protein kinase AFC2, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf09998_99554-113383' '(at2g04550 : 295.0) Encodes a protein phosphatase that interacts with MPK12, but not with other MAP kinases. It can dephosphorylate a dually phosphorylated MPK12 in vitro and can inactivate MPK12 in vivo. ibr5 mutants have reduced sensitivity to auxin and abscisic acid. IBR5 promotes auxin responses, including auxin-inducible transcription, differently than the TIR1 auxin receptor and without destabilizing Aux/IAA repressor proteins.; indole-3-butyric acid response 5 (IBR5); CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: dual specificity protein phosphatase 1 (TAIR:AT3G23610.2); Has 3359 Blast hits to 3359 proteins in 285 species: Archae - 9; Bacteria - 32; Metazoa - 1975; Fungi - 228; Plants - 239; Viruses - 200; Other Eukaryotes - 676 (source: NCBI BLink). & (gnl|cdd|29029 : 127.0) no description available & (gnl|cdd|36928 : 113.0) no description available & (reliability: 590.0) & (original description: Putative umc21, Description = Protein-tyrosine-phosphatase IBR5, PFAM = PF00782)' T '29.4' 'protein.postranslational modification' 'niben101scf10015_654830-660476' '(at3g55270 : 670.0) MAP kinase phosphatase (MKP1); mitogen-activated protein kinase phosphatase 1 (MKP1); CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: MAPK phosphatase 2 (TAIR:AT3G06110.3); Has 4115 Blast hits to 4050 proteins in 297 species: Archae - 2; Bacteria - 48; Metazoa - 2335; Fungi - 439; Plants - 312; Viruses - 98; Other Eukaryotes - 881 (source: NCBI BLink). & (gnl|cdd|29029 : 168.0) no description available & (gnl|cdd|36928 : 143.0) no description available & (reliability: 1340.0) & (original description: Putative MKP1, Description = Protein-tyrosine-phosphatase MKP1, PFAM = PF00782)' T '29.4' 'protein.postranslational modification' 'niben101scf10031_848373-855704' '(at1g10630 : 367.0) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.; ADP-ribosylation factor A1F (ARFA1F); FUNCTIONS IN: phospholipase activator activity, GTP binding, copper ion binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT2G47170.1); Has 15022 Blast hits to 15003 proteins in 509 species: Archae - 14; Bacteria - 51; Metazoa - 7710; Fungi - 1942; Plants - 2027; Viruses - 3; Other Eukaryotes - 3275 (source: NCBI BLink). & (o48920|arf_vigun : 364.0) ADP-ribosylation factor - Vigna unguiculata (Cowpea) & (gnl|cdd|47508 : 332.0) no description available & (gnl|cdd|35293 : 317.0) no description available & (reliability: 734.0) & (original description: Putative ARF1, Description = ADP-ribosylation factor 1, PFAM = PF00025)' T '29.4' 'protein.postranslational modification' 'niben101scf10031_892640-906560' '(q40518|msk1_tobac : 827.0) Shaggy-related protein kinase NtK-1 (EC 2.7.11.1) - Nicotiana tabacum (Common tobacco) & (at3g05840 : 746.0) encodes a SHAGGY-like kinase involved in meristem organization.; ATSK12; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: meristem structural organization, gynoecium development, phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: shaggy-related kinase 11 (TAIR:AT5G26751.1); Has 106116 Blast hits to 104748 proteins in 3681 species: Archae - 81; Bacteria - 10864; Metazoa - 38225; Fungi - 11828; Plants - 26475; Viruses - 386; Other Eukaryotes - 18257 (source: NCBI BLink). & (gnl|cdd|35877 : 570.0) no description available & (gnl|cdd|29142 : 228.0) no description available & (reliability: 1492.0) & (original description: Putative ASK3, Description = Shaggy-related protein kinase gamma, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf10144_60991-76755' '(at1g09020 : 737.0) putative activator subunit of SNF1-related protein kinase; homolog of yeast sucrose nonfermenting 4 (SNF4); CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase-related (TAIR:AT1G27070.1); Has 1379 Blast hits to 1368 proteins in 272 species: Archae - 14; Bacteria - 104; Metazoa - 613; Fungi - 295; Plants - 229; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36975 : 128.0) no description available & (gnl|cdd|73139 : 109.0) no description available & (reliability: 1474.0) & (original description: Putative SNF4, Description = Sucrose nonfermenting 4-like protein, PFAM = PF00571;PF00571;PF16561)' T '29.4' 'protein.postranslational modification' 'niben101scf10169_539878-544390' '(at1g07160 : 364.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: chloroplast, protein serine/threonine phosphatase complex; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G30020.1); Has 7376 Blast hits to 7203 proteins in 674 species: Archae - 10; Bacteria - 746; Metazoa - 1767; Fungi - 814; Plants - 2696; Viruses - 11; Other Eukaryotes - 1332 (source: NCBI BLink). & (gnl|cdd|35917 : 245.0) no description available & (gnl|cdd|29062 : 235.0) no description available & (reliability: 728.0) & (original description: Putative PP2C5, Description = Probable protein phosphatase 2C 30, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf10200_12023-21356' '(at3g18040 : 764.0) Encodes a protein with similarity to MAP kinases (MAPK9).Expressed preferentially in guard cells and appears to be involved in reactive oxygen species mediated ABA signaling.; MAP kinase 9 (MPK9); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: MAP kinase 15 (TAIR:AT1G73670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5z9j0|mpk12_orysa : 732.0) Mitogen-activated protein kinase 12 (EC 2.7.11.24) (MAP kinase 12) (OsBWMK1) (Blast- and wound-induced MAP kinase 1) (MAP kinase 1) (OsMAPK1) - Oryza sativa (Rice) & (gnl|cdd|35879 : 481.0) no description available & (gnl|cdd|29142 : 262.0) no description available & (reliability: 1444.0) & (original description: Putative MPK9, Description = Mitogen-activated protein kinase 9, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf10219_62021-63831' '(at4g18593 : 173.0) dual specificity protein phosphatase-related; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative v1g126132, Description = Dual specificity protein phosphatase 12, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben101scf10278_34750-45155' '(q75lr7|sapk1_orysa : 466.0) Serine/threonine-protein kinase SAPK1 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 1) - Oryza sativa (Rice) & (at1g78290 : 429.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to karrikin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G33950.1); Has 112604 Blast hits to 110873 proteins in 3029 species: Archae - 114; Bacteria - 13128; Metazoa - 41421; Fungi - 12195; Plants - 25871; Viruses - 459; Other Eukaryotes - 19416 (source: NCBI BLink). & (gnl|cdd|35803 : 267.0) no description available & (gnl|cdd|47550 : 231.0) no description available & (reliability: 858.0) & (original description: Putative OST1, Description = Calcium-independent ABA-activated protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf10278_34777-44745' '(q75lr7|sapk1_orysa : 523.0) Serine/threonine-protein kinase SAPK1 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 1) - Oryza sativa (Rice) & (at1g78290 : 500.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to karrikin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G33950.1); Has 112604 Blast hits to 110873 proteins in 3029 species: Archae - 114; Bacteria - 13128; Metazoa - 41421; Fungi - 12195; Plants - 25871; Viruses - 459; Other Eukaryotes - 19416 (source: NCBI BLink). & (gnl|cdd|35803 : 298.0) no description available & (gnl|cdd|29142 : 262.0) no description available & (reliability: 1000.0) & (original description: Putative SAPK2, Description = Serine/threonine-protein kinase SAPK2, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf10314_430476-466328' '(at5g28850 : 821.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G28900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37773 : 618.0) no description available & (reliability: 1642.0) & (original description: Putative B''BETA, Description = Serine/threonine protein phosphatase 2A regulatory subunit B''beta, PFAM = PF13499)' T '29.4' 'protein.postranslational modification' 'niben101scf10332_195820-206414' '(at2g43850 : 711.0) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G59830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35413 : 241.0) no description available & (gnl|cdd|47549 : 185.0) no description available & (q6x4a2|cipk1_orysa : 90.5) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1422.0) & (original description: Putative APK1, Description = Integrin-linked kinase family protein, PFAM = PF07714;PF12796)' T '29.4' 'protein.postranslational modification' 'niben101scf10343_122699-127123' '(o04856|pp11_tobac : 638.0) Serine/threonine-protein phosphatase PP1 isozyme 1 (EC 3.1.3.16) - Nicotiana tabacum (Common tobacco) & (at5g59160 : 577.0) Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers.; type one serine/threonine protein phosphatase 2 (TOPP2); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: type one serine/threonine protein phosphatase 5 (TAIR:AT3G46820.1); Has 7217 Blast hits to 7021 proteins in 626 species: Archae - 78; Bacteria - 572; Metazoa - 2410; Fungi - 1415; Plants - 989; Viruses - 12; Other Eukaryotes - 1741 (source: NCBI BLink). & (gnl|cdd|35595 : 479.0) no description available & (gnl|cdd|29063 : 413.0) no description available & (reliability: 1154.0) & (original description: Putative NPP1, Description = Serine/threonine-protein phosphatase PP1 isozyme 1, PFAM = PF16891;PF00149)' T '29.4' 'protein.postranslational modification' 'niben101scf10438_365454-370632' '(q84tc6|sapk2_orysa : 529.0) Serine/threonine-protein kinase SAPK2 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 2) - Oryza sativa (Rice) & (at1g78290 : 501.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to karrikin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G33950.1); Has 112604 Blast hits to 110873 proteins in 3029 species: Archae - 114; Bacteria - 13128; Metazoa - 41421; Fungi - 12195; Plants - 25871; Viruses - 459; Other Eukaryotes - 19416 (source: NCBI BLink). & (gnl|cdd|35803 : 304.0) no description available & (gnl|cdd|47550 : 269.0) no description available & (reliability: 1002.0) & (original description: Putative pk5, Description = Serine/threonine-protein kinase SAPK7, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf10440_32383-37890' '(gnl|cdd|58033 : 103.0) no description available & (gnl|cdd|35293 : 97.6) no description available & (at1g70490 : 96.3) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.; ARFA1D; FUNCTIONS IN: phospholipase activator activity, GTP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor 1 (TAIR:AT1G23490.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p51821|arf1_chlre : 96.3) ADP-ribosylation factor 1 - Chlamydomonas reinhardtii & (reliability: 192.6) & (original description: Putative arf1, Description = ADP-ribosylation factor 1, PFAM = PF00025)' T '29.4' 'protein.postranslational modification' 'niben101scf10482_228127-233545' '(at1g27070 : 284.0) 5'-AMP-activated protein kinase-related; BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase-related (TAIR:AT5G03420.1); Has 814 Blast hits to 789 proteins in 227 species: Archae - 3; Bacteria - 97; Metazoa - 231; Fungi - 191; Plants - 199; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|30346 : 96.5) no description available & (reliability: 568.0) & (original description: Putative SIP4, Description = SKIP interacting protein 4, PFAM = PF16561)' T '29.4' 'protein.postranslational modification' 'niben101scf10488_35464-42562' '(at5g59010 : 775.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT3G54030.1); Has 21140 Blast hits to 20932 proteins in 637 species: Archae - 6; Bacteria - 562; Metazoa - 1681; Fungi - 205; Plants - 18085; Viruses - 31; Other Eukaryotes - 570 (source: NCBI BLink). & (gnl|cdd|36401 : 199.0) no description available & (o24585|cri4_maize : 109.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 105.0) no description available & (reliability: 1470.0) & (original description: Putative At5g41260, Description = Probable serine/threonine-protein kinase At5g41260, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf10502_347-9654' '(q9xgh7|pp2a_tobac : 440.0) Serine/threonine-protein phosphatase PP2A catalytic subunit (EC 3.1.3.16) - Nicotiana tabacum (Common tobacco) & (at3g58500 : 399.0) Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].; protein phosphatase 2A-4 (PP2A-4); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A-3 (TAIR:AT2G42500.1); Has 6816 Blast hits to 6628 proteins in 481 species: Archae - 80; Bacteria - 203; Metazoa - 2402; Fungi - 1409; Plants - 984; Viruses - 3; Other Eukaryotes - 1735 (source: NCBI BLink). & (gnl|cdd|35592 : 328.0) no description available & (gnl|cdd|29063 : 223.0) no description available & (reliability: 798.0) & (original description: Putative mts, Description = Serine/threonine-protein phosphatase, PFAM = PF00149)' T '29.4' 'protein.postranslational modification' 'niben101scf10509_210391-216153' '(at4g03260 : 465.0) Outer arm dynein light chain 1 protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Outer arm dynein light chain 1 protein (TAIR:AT1G78230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35751 : 99.2) no description available & (reliability: 930.0) & (original description: Putative At4g03260, Description = At4g03260, PFAM = PF13855)' T '29.4' 'protein.postranslational modification' 'niben101scf10524_284886-289340' '(at3g16560 : 456.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: pol-like 5 (TAIR:AT1G07630.1); Has 5306 Blast hits to 5268 proteins in 332 species: Archae - 0; Bacteria - 114; Metazoa - 1381; Fungi - 595; Plants - 2295; Viruses - 5; Other Eukaryotes - 916 (source: NCBI BLink). & (gnl|cdd|35919 : 298.0) no description available & (gnl|cdd|29062 : 146.0) no description available & (reliability: 912.0) & (original description: Putative At3g16560, Description = Probable protein phosphatase 2C 40, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf10707_45616-51675' '(at3g17090 : 549.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: endomembrane system, protein serine/threonine phosphatase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G38520.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35919 : 363.0) no description available & (gnl|cdd|47660 : 163.0) no description available & (reliability: 1098.0) & (original description: Putative pp2C2, Description = Serine/threonine phosphatase family, 2C domain protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf10866_299839-305439' '(at1g18670 : 593.0) Encodes a cyclin-dependent kinase-like protein with a ser/thr protein kinase domain and an N-terminal myristoylation sequence. Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do.; IMPAIRED IN BABA-INDUCED STERILITY 1 (IBS1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G74330.2); Has 121773 Blast hits to 120368 proteins in 4310 species: Archae - 86; Bacteria - 13259; Metazoa - 45481; Fungi - 12893; Plants - 29647; Viruses - 443; Other Eukaryotes - 19964 (source: NCBI BLink). & (gnl|cdd|35820 : 583.0) no description available & (gnl|cdd|29142 : 259.0) no description available & (p29620|kc47_orysa : 218.0) CDC2+/CDC28-related protein kinase R2 (EC 2.7.11.22) - Oryza sativa (Rice) & (reliability: 1186.0) & (original description: Putative IBS1, Description = Cyclin-dependent kinase-like protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf10900_223951-227704' '(gnl|cdd|35830 : 512.0) no description available & (at3g44610 : 454.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 2 (TAIR:AT5G47750.1); Has 99456 Blast hits to 74546 proteins in 2417 species: Archae - 35; Bacteria - 11117; Metazoa - 41933; Fungi - 12113; Plants - 14694; Viruses - 280; Other Eukaryotes - 19284 (source: NCBI BLink). & (p47997|g11a_orysa : 406.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 146.0) no description available & (reliability: 908.0) & (original description: Putative D6PK, Description = Protein kinase G11A, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf10918_27249-33277' '(at4g28560 : 394.0) encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Most similar to RIC6 and RIC8 (subfamily group II). Gene is expressed in all tissues examined.; ROP-interactive CRIB motif-containing protein 7 (RIC7); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G13230.1); Has 69989 Blast hits to 22570 proteins in 852 species: Archae - 23; Bacteria - 3729; Metazoa - 9129; Fungi - 406; Plants - 52718; Viruses - 0; Other Eukaryotes - 3984 (source: NCBI BLink). & (p93194|rpk1_iponi : 105.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35693 : 86.2) no description available & (reliability: 788.0) & (original description: Putative RIC7, Description = ROP-interactive CRIB motif-containing protein 7, PFAM = PF13855)' T '29.4' 'protein.postranslational modification' 'niben101scf10927_31357-42919' '(at1g04130 : 435.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G56440.1); Has 5277 Blast hits to 4657 proteins in 398 species: Archae - 14; Bacteria - 308; Metazoa - 2191; Fungi - 837; Plants - 950; Viruses - 0; Other Eukaryotes - 977 (source: NCBI BLink). & (gnl|cdd|35771 : 142.0) no description available & (reliability: 870.0) & (original description: Putative At1g04130, Description = Carboxylate clamp-tetratricopeptide repeat protein, PFAM = )' T '29.4' 'protein.postranslational modification' 'niben101scf11078_77787-81190' '(at4g18700 : 724.0) Encodes CBL-interacting protein kinase 12 (CIPK12).; CBL-interacting protein kinase 12 (CIPK12); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 19 (TAIR:AT5G45810.1); Has 132740 Blast hits to 130588 proteins in 4556 species: Archae - 205; Bacteria - 15732; Metazoa - 48597; Fungi - 13262; Plants - 32355; Viruses - 523; Other Eukaryotes - 22066 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 447.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 357.0) no description available & (gnl|cdd|29142 : 303.0) no description available & (reliability: 1448.0) & (original description: Putative CIPK12, Description = CBL-interacting serine/threonine-protein kinase 12, PFAM = PF00069;PF03822)' T '29.4' 'protein.postranslational modification' 'niben101scf11108_250109-259967' '(gnl|cdd|35413 : 221.0) no description available & (at4g38470 : 177.0) ACT-like protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Amino acid-binding ACT (InterPro:IPR002912), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: ACT-like protein tyrosine kinase family protein (TAIR:AT4G35780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29142 : 176.0) no description available & (q8l4h4|nork_medtr : 101.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 354.0) & (original description: Putative ORF44, Description = Serine/threonine-protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf11130_40710-48084' '(at5g53000 : 452.0) PP2A-associated protein with a possible function in the chilling response; 2A phosphatase associated protein of 46 kD (TAP46); CONTAINS InterPro DOMAIN/s: TAP42-like protein (InterPro:IPR007304); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67777 : 241.0) no description available & (gnl|cdd|38041 : 172.0) no description available & (reliability: 904.0) & (original description: Putative TAP46, Description = PP2A regulatory subunit TAP46, PFAM = PF04177)' T '29.4' 'protein.postranslational modification' 'niben101scf11224_21287-26814' '(at3g15260 : 424.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G28400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35917 : 240.0) no description available & (gnl|cdd|29062 : 215.0) no description available & (reliability: 848.0) & (original description: Putative At3g15260, Description = Probable protein phosphatase 2C 39, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf11235_43821-47116' '(at2g30360 : 526.0) Encodes a SOS2-like protein kinase that is a member of the CBL-interacting protein kinase family.Loss of function mutants show a decrease in sensitivity to high pH.Phosphorylates AHA2, a plasma membrane H+ ATPase.This phosphorylation appears to regulate the activity of the proton transporter.; SOS3-interacting protein 4 (SIP4); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: serine/threonine protein kinase 1 (TAIR:AT5G01820.1); Has 132389 Blast hits to 130226 proteins in 4650 species: Archae - 184; Bacteria - 15582; Metazoa - 48520; Fungi - 13393; Plants - 32054; Viruses - 541; Other Eukaryotes - 22115 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 353.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 331.0) no description available & (gnl|cdd|29142 : 294.0) no description available & (reliability: 1052.0) & (original description: Putative CIPK11, Description = CBL-interacting serine/threonine-protein kinase 11, PFAM = PF03822;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf11235_144201-147649' '(at5g58380 : 618.0) Encodes a CBL-interacting protein kinase with similarity to SOS protein kinase.; SOS3-interacting protein 1 (SIP1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 2 (TAIR:AT5G07070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 437.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 361.0) no description available & (gnl|cdd|29142 : 299.0) no description available & (reliability: 1236.0) & (original description: Putative CIPK10, Description = CBL-interacting serine/threonine-protein kinase 10, PFAM = PF03822;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf11383_281011-295456' '(at5g58140 : 1202.0) Membrane-bound protein serine/threonine kinase that functions as blue light photoreceptor in redundancy with PHO1. Involved in stomatal opening, chloroplast movement and phototropism. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT2 possesses two LOV (LOV1 and LOV2, for light-oxygen-voltage-sensing) domains involved in FMN-binding and a C-terminus forming a serine/threonine kinase domain. LOV2 acts as an inhibitor of phototropin kinase in the dark, and light cancels the inhibition through cysteine-FMN adduct formation. LOV1 in contrast acts as an attenuator of photoactivation. Localized to the Golgi apparatus under the induction of blue light.; phototropin 2 (PHOT2); FUNCTIONS IN: protein serine/threonine kinase activity, FMN binding, kinase activity, blue light photoreceptor activity; INVOLVED IN: in 7 processes; LOCATED IN: Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: phototropin 1 (TAIR:AT3G45780.2); Has 25181 Blast hits to 21357 proteins in 1460 species: Archae - 236; Bacteria - 6754; Metazoa - 8411; Fungi - 2718; Plants - 3113; Viruses - 9; Other Eukaryotes - 3940 (source: NCBI BLink). & (gnl|cdd|35830 : 453.0) no description available & (gnl|cdd|29142 : 259.0) no description available & (p15792|kpk1_phavu : 218.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 2404.0) & (original description: Putative PHOT2, Description = Phototropin-2, PFAM = PF00069;PF13426;PF13426)' T '29.4' 'protein.postranslational modification' 'niben101scf11446_27457-42786' '(at2g31010 : 689.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Mitogen activated protein kinase kinase kinase-related (TAIR:AT3G58640.2). & (gnl|cdd|35413 : 275.0) no description available & (gnl|cdd|87344 : 229.0) no description available & (q8l4h4|nork_medtr : 107.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1378.0) & (original description: Putative Sb03g030890, Description = Putative uncharacterized protein Sb03g030890, PFAM = PF14381;PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf11560_24535-29425' '(at4g38520 : 614.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35919 : 401.0) no description available & (gnl|cdd|47660 : 180.0) no description available & (reliability: 1228.0) & (original description: Putative pp2C2, Description = Serine/threonine phosphatase family, 2C domain protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf11616_64791-72485' '(at5g60550 : 516.0) Encodes a geminivirus Rep interacting kinase (GRIK; GRIK1/AT3G45240, GRIK2/AT5G60550). GRIKs are SnRK1 (SNF1-related kinases) activating kinases. Both GRIKs specifically bind to the SnRK1 catalytic subunit and phosphorylate the equivalent threonine residue in its activation loop in vitro.; geminivirus rep interacting kinase 2 (GRIK2); CONTAINS InterPro DOMAIN/s: Calcium/calmodulin-dependent protein kinase kinase (InterPro:IPR020657), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: geminivirus rep interacting kinase 1 (TAIR:AT3G45240.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35805 : 381.0) no description available & (gnl|cdd|29142 : 242.0) no description available & (q6x4a2|cipk1_orysa : 139.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1032.0) & (original description: Putative CDPKK2, Description = Calcium/calmodulin dependent protein kinase kinase 2, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf11620_30898-34406' '(at5g55560 : 483.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 3 (TAIR:AT3G48260.1); Has 100897 Blast hits to 100061 proteins in 3189 species: Archae - 71; Bacteria - 9572; Metazoa - 37309; Fungi - 9559; Plants - 27616; Viruses - 356; Other Eukaryotes - 16414 (source: NCBI BLink). & (gnl|cdd|35804 : 445.0) no description available & (gnl|cdd|47550 : 193.0) no description available & (q6x4a2|cipk1_orysa : 88.2) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 966.0) & (original description: Putative WNK11, Description = Probable serine/threonine-protein kinase WNK11, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf11836_41241-55894' '(at5g67380 : 418.0) casein kinase II catalytic subunit alpha; casein kinase alpha 1 (CKA1); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase II, alpha chain 2 (TAIR:AT3G50000.1); Has 73369 Blast hits to 72658 proteins in 2362 species: Archae - 60; Bacteria - 7223; Metazoa - 28693; Fungi - 10783; Plants - 10981; Viruses - 246; Other Eukaryotes - 15383 (source: NCBI BLink). & (gnl|cdd|35887 : 376.0) no description available & (p28523|csk2a_maize : 354.0) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II) (CK2-alpha) - Zea mays (Maize) & (gnl|cdd|84488 : 137.0) no description available & (reliability: 836.0) & (original description: Putative casK, Description = Casein kinase II subunit alpha, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf11937_324603-331208' '(at3g44610 : 574.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 2 (TAIR:AT5G47750.1); Has 99456 Blast hits to 74546 proteins in 2417 species: Archae - 35; Bacteria - 11117; Metazoa - 41933; Fungi - 12113; Plants - 14694; Viruses - 280; Other Eukaryotes - 19284 (source: NCBI BLink). & (gnl|cdd|35830 : 534.0) no description available & (p47997|g11a_orysa : 402.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 142.0) no description available & (reliability: 1148.0) & (original description: Putative At3g44610, Description = At3g44610, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf12103_84815-94171' '(at3g17510 : 583.0) Encodes a CBL-interacting protein kinase. Specifically interacts with ECT1 and ECT2.; CBL-interacting protein kinase 1 (CIPK1); CONTAINS InterPro DOMAIN/s: NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 17 (TAIR:AT1G48260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 424.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 339.0) no description available & (gnl|cdd|29142 : 282.0) no description available & (reliability: 1166.0) & (original description: Putative CIPK1, Description = CBL-interacting serine/threonine-protein kinase 1, PFAM = PF00069;PF03822)' T '29.4' 'protein.postranslational modification' 'niben101scf12205_1-15713' '(at4g18950 : 572.0) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Integrin-linked protein kinase (InterPro:IPR016253), Ankyrin repeat-containing domain (InterPro:IPR020683), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G58760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 234.0) no description available & (gnl|cdd|84488 : 188.0) no description available & (q6x4a2|cipk1_orysa : 108.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1144.0) & (original description: Putative APK1, Description = Ankyrin-kinase protein, PFAM = PF07714;PF12796)' T '29.4' 'protein.postranslational modification' 'niben101scf12289_135867-138934' '(gnl|cdd|35419 : 278.0) no description available & (gnl|cdd|29142 : 243.0) no description available & (at5g55090 : 236.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 15 (MAPKKK15); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 16 (TAIR:AT4G26890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 121.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 472.0) & (original description: Putative BnaC08g12350D, Description = BnaC08g12350D protein, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf12410_3209-25159' '(at2g31320 : 1319.0) Abiotic Stress-inducible gene.; poly(ADP-ribose) polymerase 2 (PARP2); FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity, NAD or NADH binding, DNA binding, zinc ion binding; INVOLVED IN: DNA repair, response to oxidative stress, response to abscisic acid stimulus, protein amino acid ADP-ribosylation, response to abiotic stimulus; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: PADR1 (InterPro:IPR012982), Zinc finger, PARP-type (InterPro:IPR001510), WGR (InterPro:IPR008893), Poly(ADP-ribose) polymerase, regulatory domain (InterPro:IPR004102), NAD+ ADP-ribosyltransferase (InterPro:IPR008288), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: NAD+ ADP-ribosyltransferases;NAD+ ADP-ribosyltransferases (TAIR:AT5G22470.1); Has 1243 Blast hits to 1018 proteins in 163 species: Archae - 0; Bacteria - 14; Metazoa - 746; Fungi - 100; Plants - 173; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink). & (q7eyv7|parp1_orysa : 1228.0) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1) (ADPRT 1) (NAD(+) ADP-ribosyltransferase 1) (Poly[ADP-ribose] synthetase 1) - Oryza sativa (Rice) & (gnl|cdd|30068 : 462.0) no description available & (gnl|cdd|36255 : 271.0) no description available & (reliability: 2638.0) & (original description: Putative PARP1, Description = Poly [ADP-ribose] polymerase 1, PFAM = PF08063;PF00533;PF00644;PF02877;PF00645;PF00645;PF05406)' T '29.4' 'protein.postranslational modification' 'niben101scf12481_169099-189370' '(at5g35410 : 663.0) encodes a member of the CBL-interacting protein kinase family, is a regulatory component controlling plant potassium nutrition; SALT OVERLY SENSITIVE 2 (SOS2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 8 (TAIR:AT4G24400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 484.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 342.0) no description available & (gnl|cdd|29142 : 286.0) no description available & (reliability: 1326.0) & (original description: Putative cipk, Description = Non-specific serine/threonine protein kinase, PFAM = PF03822;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf12522_165987-175273' '(at2g35350 : 726.0) Encodes a protein most similar to the POLTERGEIST locus. Double mutant analysis of loss of function alleles indicate PLL1 functions redundantly with POL to regulate meristem size and pedicel length. Acts in a dose dependent manner with POL to suppress the clv1, clv2 and clv3 phenotypes.; poltergeist like 1 (PLL1); FUNCTIONS IN: phospholipid binding, protein serine/threonine phosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G46920.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35919 : 291.0) no description available & (gnl|cdd|29062 : 130.0) no description available & (reliability: 1452.0) & (original description: Putative PLL1, Description = Protein phosphatase 2C 29, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf12680_92179-113637' '(at1g24510 : 989.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: protein binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), T-complex protein 1, epsilon subunit (InterPro:IPR012718), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G18190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p54411|tcpe2_avesa : 957.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (gnl|cdd|48156 : 956.0) no description available & (gnl|cdd|35578 : 471.0) no description available & (reliability: 1978.0) & (original description: Putative CCT5, Description = T-complex protein 1 subunit epsilon, PFAM = PF00118)' T '29.4' 'protein.postranslational modification' 'niben101scf12866_122962-129415' '(at4g18710 : 740.0) ATSK (shaggy-like kinase) family member that encodes an AtSK protein involved in the cross-talk between auxin and brassinosteroid signaling pathways. BR-INSENSITIVE 2 mutant indicated that the BR-insensitive dwarf phenotype was due to a semidominant mutation in the BIN2. BIN2 is not allelic to BRI1. BIN2-mediated phosphorylation appears to promote BZR1 export from the nucleus.; BRASSINOSTEROID-INSENSITIVE 2 (BIN2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: GSK3/SHAGGY-like protein kinase 1 (TAIR:AT1G06390.2). & (q40518|msk1_tobac : 641.0) Shaggy-related protein kinase NtK-1 (EC 2.7.11.1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35877 : 581.0) no description available & (gnl|cdd|29142 : 232.0) no description available & (reliability: 1430.0) & (original description: Putative ASK7, Description = Shaggy-related protein kinase eta, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf12928_67101-73536' '(at1g47380 : 682.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G68410.2); Has 5162 Blast hits to 5161 proteins in 415 species: Archae - 0; Bacteria - 290; Metazoa - 1152; Fungi - 442; Plants - 2230; Viruses - 7; Other Eukaryotes - 1041 (source: NCBI BLink). & (gnl|cdd|35917 : 175.0) no description available & (gnl|cdd|29062 : 174.0) no description available & (reliability: 1364.0) & (original description: Putative At1g47380, Description = Probable protein phosphatase 2C 12, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf12935_860-7015' '(at2g33700 : 525.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G51470.1); Has 6726 Blast hits to 6663 proteins in 500 species: Archae - 12; Bacteria - 399; Metazoa - 1621; Fungi - 698; Plants - 2664; Viruses - 7; Other Eukaryotes - 1325 (source: NCBI BLink). & (gnl|cdd|35917 : 248.0) no description available & (gnl|cdd|29062 : 240.0) no description available & (reliability: 1050.0) & (original description: Putative At2g33700, Description = Probable protein phosphatase 2C 27, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf12938_75765-83301' '(at1g05000 : 271.0) Phosphotyrosine protein phosphatases superfamily protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic (InterPro:IPR020428), Protein-tyrosine phosphatase, SIW14-like (InterPro:IPR004861); BEST Arabidopsis thaliana protein match is: Phosphotyrosine protein phosphatases superfamily protein (TAIR:AT2G32960.1); Has 580 Blast hits to 572 proteins in 119 species: Archae - 0; Bacteria - 14; Metazoa - 1; Fungi - 314; Plants - 145; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|36785 : 232.0) no description available & (gnl|cdd|86260 : 199.0) no description available & (reliability: 542.0) & (original description: Putative PTP, Description = Tyrosine specific protein phosphatase family protein, PFAM = PF03162)' T '29.4' 'protein.postranslational modification' 'niben101scf12983_153905-172986' '(at5g35980 : 926.0) yeast YAK1-related gene 1 (YAK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G17750.1); Has 91682 Blast hits to 90157 proteins in 2771 species: Archae - 99; Bacteria - 7981; Metazoa - 36897; Fungi - 11192; Plants - 18283; Viruses - 359; Other Eukaryotes - 16871 (source: NCBI BLink). & (gnl|cdd|35886 : 435.0) no description available & (gnl|cdd|29142 : 208.0) no description available & (q40517|ntf3_tobac : 122.0) Mitogen-activated protein kinase homolog NTF3 (EC 2.7.11.24) (P43) - Nicotiana tabacum (Common tobacco) & (reliability: 1852.0) & (original description: Putative YAK1, Description = At5g35980, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf13036_34228-51980' '(at5g03730 : 989.0) Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed.; CONSTITUTIVE TRIPLE RESPONSE 1 (CTR1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G24480.1); Has 126606 Blast hits to 124675 proteins in 4966 species: Archae - 112; Bacteria - 13843; Metazoa - 48138; Fungi - 11278; Plants - 33351; Viruses - 509; Other Eukaryotes - 19375 (source: NCBI BLink). & (gnl|cdd|35413 : 315.0) no description available & (gnl|cdd|87344 : 259.0) no description available & (q8lkz1|nork_pea : 119.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 1978.0) & (original description: Putative CTR1, Description = Serine/threonine-protein kinase CTR1, PFAM = PF07714;PF14381)' T '29.4' 'protein.postranslational modification' 'niben101scf13186_133578-143377' '(at5g14720 : 869.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G79640.1); Has 122716 Blast hits to 120970 proteins in 3289 species: Archae - 117; Bacteria - 14305; Metazoa - 44836; Fungi - 12007; Plants - 31268; Viruses - 500; Other Eukaryotes - 19683 (source: NCBI BLink). & (gnl|cdd|35802 : 531.0) no description available & (gnl|cdd|29142 : 252.0) no description available & (q5qn75|m2k1_orysa : 131.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1738.0) & (original description: Putative MAP4K4, Description = MAP kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf13290_25737-38879' '(at4g14350 : 853.0) AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm, phragmoplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), Protein kinase-like domain (InterPro:IPR011009), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT3G23310.1); Has 110439 Blast hits to 109096 proteins in 3570 species: Archae - 132; Bacteria - 13667; Metazoa - 39169; Fungi - 11337; Plants - 26451; Viruses - 447; Other Eukaryotes - 19236 (source: NCBI BLink). & (gnl|cdd|35825 : 713.0) no description available & (gnl|cdd|47550 : 282.0) no description available & (p15792|kpk1_phavu : 159.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1706.0) & (original description: Putative ndrA, Description = Putative uncharacterized protein ndrA, PFAM = PF00069;PF00433)' T '29.4' 'protein.postranslational modification' 'niben101scf13776_278329-285545' '(at4g03230 : 489.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G11340.1); Has 120947 Blast hits to 117758 proteins in 4568 species: Archae - 89; Bacteria - 13334; Metazoa - 43594; Fungi - 9240; Plants - 36995; Viruses - 386; Other Eukaryotes - 17309 (source: NCBI BLink). & (gnl|cdd|36401 : 323.0) no description available & (q8lpb4|pskr_dauca : 212.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 174.0) no description available & (reliability: 978.0) & (original description: Putative glysoja_007438, Description = Cysteine-rich receptor-like protein kinase 10, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf13776_279947-283115' '(at4g03230 : 241.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G11340.1); Has 120947 Blast hits to 117758 proteins in 4568 species: Archae - 89; Bacteria - 13334; Metazoa - 43594; Fungi - 9240; Plants - 36995; Viruses - 386; Other Eukaryotes - 17309 (source: NCBI BLink). & (gnl|cdd|36401 : 179.0) no description available & (q8l4h4|nork_medtr : 129.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 114.0) no description available & (reliability: 482.0) & (original description: Putative stk, Description = Serine/threonine-protein kinase, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf13907_13842-20389' '(at2g25620 : 211.0) Encodes DBP1, a member of the DBP factors (DNA-binding protein phosphatases) featuring sequence-specific DNA-binding and protein phosphatase activity. DBP1 is involved in plant-potyvirus interactions. Loss-of-function of DBP1 renders resistance to potyviruses.; DNA-binding protein phosphatase 1 (DBP1); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: regulation of defense response to virus; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G33700.1); Has 7196 Blast hits to 7030 proteins in 671 species: Archae - 12; Bacteria - 774; Metazoa - 1729; Fungi - 719; Plants - 2627; Viruses - 7; Other Eukaryotes - 1328 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative DBP1, Description = Protein phosphatase 2C, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf13962_164314-168026' '(at5g45820 : 603.0) Encodes a CBL-interacting serine/threonine protein kinase comprised of an N-terminal kinase catalytic domain similar to SNF1/AMPK and a unique C-terminal regulatory domain.; CBL-interacting protein kinase 20 (CIPK20); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SOS3-interacting protein 1 (TAIR:AT5G58380.1); Has 132772 Blast hits to 130743 proteins in 4620 species: Archae - 210; Bacteria - 15587; Metazoa - 48907; Fungi - 13398; Plants - 32037; Viruses - 531; Other Eukaryotes - 22102 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 474.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 348.0) no description available & (gnl|cdd|29142 : 294.0) no description available & (reliability: 1206.0) & (original description: Putative CIPK5, Description = CBL-interacting protein kinase 5, PFAM = PF00069;PF03822)' T '29.4' 'protein.postranslational modification' 'niben101scf13962_172889-176325' '(at4g18700 : 718.0) Encodes CBL-interacting protein kinase 12 (CIPK12).; CBL-interacting protein kinase 12 (CIPK12); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 19 (TAIR:AT5G45810.1); Has 132740 Blast hits to 130588 proteins in 4556 species: Archae - 205; Bacteria - 15732; Metazoa - 48597; Fungi - 13262; Plants - 32355; Viruses - 523; Other Eukaryotes - 22066 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 434.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 361.0) no description available & (gnl|cdd|29142 : 303.0) no description available & (reliability: 1436.0) & (original description: Putative CIPK18, Description = CBL-interacting serine/threonine-protein kinase 18, PFAM = PF00069;PF03822)' T '29.4' 'protein.postranslational modification' 'niben101scf13995_142100-145328' '(gnl|cdd|36401 : 226.0) no description available & (at3g57750 : 221.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G57710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8lkz1|nork_pea : 106.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|84488 : 82.2) no description available & (reliability: 442.0) & (original description: Putative ZED1, Description = Non-functional pseudokinase ZED1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf14144_208476-215849' '(at2g25620 : 357.0) Encodes DBP1, a member of the DBP factors (DNA-binding protein phosphatases) featuring sequence-specific DNA-binding and protein phosphatase activity. DBP1 is involved in plant-potyvirus interactions. Loss-of-function of DBP1 renders resistance to potyviruses.; DNA-binding protein phosphatase 1 (DBP1); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: regulation of defense response to virus; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G33700.1); Has 7196 Blast hits to 7030 proteins in 671 species: Archae - 12; Bacteria - 774; Metazoa - 1729; Fungi - 719; Plants - 2627; Viruses - 7; Other Eukaryotes - 1328 (source: NCBI BLink). & (gnl|cdd|35917 : 225.0) no description available & (gnl|cdd|29062 : 215.0) no description available & (reliability: 714.0) & (original description: Putative Os02g0799000, Description = Probable protein phosphatase 2C 27, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf14741_27660-36114' '(at3g20860 : 422.0) Encodes a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.; NIMA-related kinase 5 (NEK5); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: NIMA (never in mitosis, gene A)-related 6 (TAIR:AT3G44200.1); Has 126562 Blast hits to 124209 proteins in 4357 species: Archae - 139; Bacteria - 14378; Metazoa - 47141; Fungi - 12363; Plants - 31069; Viruses - 498; Other Eukaryotes - 20974 (source: NCBI BLink). & (gnl|cdd|35809 : 374.0) no description available & (gnl|cdd|29142 : 262.0) no description available & (q5qn75|m2k1_orysa : 119.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 844.0) & (original description: Putative stkc, Description = Serine/threonine-protein kinase Nek5, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf14935_46451-55046' '(gnl|cdd|85563 : 718.0) no description available & (at1g13460 : 704.0) Encodes protein phosphatase 2A (PP2A) B'theta subunit. Targeted to peroxisomes.; Protein phosphatase 2A regulatory B subunit family protein; FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: peroxisome, protein phosphatase type 2A complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT3G26020.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37296 : 651.0) no description available & (reliability: 1408.0) & (original description: Putative B'IOTA, Description = Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform, PFAM = PF01603)' T '29.4' 'protein.postranslational modification' 'niben101scf15051_25431-31923' '(at3g44620 : 275.0) protein tyrosine phosphatases;protein tyrosine phosphatases; FUNCTIONS IN: protein tyrosine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase/arsenate reductase (InterPro:IPR000106), Protein-tyrosine phosphatase, low molecular weight (InterPro:IPR017867). & (gnl|cdd|38427 : 200.0) no description available & (gnl|cdd|29014 : 156.0) no description available & (reliability: 550.0) & (original description: Putative yfkJ, Description = Low molecular weight protein-tyrosine-phosphatase YfkJ, PFAM = PF01451)' T '29.4' 'protein.postranslational modification' 'niben101scf15051_36485-42070' '(gnl|cdd|35830 : 601.0) no description available & (at2g36350 : 536.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: KCBP-interacting protein kinase (TAIR:AT3G52890.2); Has 125358 Blast hits to 88611 proteins in 3507 species: Archae - 46; Bacteria - 15805; Metazoa - 50208; Fungi - 14670; Plants - 20571; Viruses - 390; Other Eukaryotes - 23668 (source: NCBI BLink). & (p47997|g11a_orysa : 499.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 160.0) no description available & (reliability: 1072.0) & (original description: Putative Adi3, Description = Protein kinase G11A, PFAM = PF00069;PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf15077_90468-97224' '(at3g15610 : 543.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G52730.1); Has 43706 Blast hits to 23089 proteins in 800 species: Archae - 76; Bacteria - 7357; Metazoa - 15603; Fungi - 10314; Plants - 4879; Viruses - 0; Other Eukaryotes - 5477 (source: NCBI BLink). & (gnl|cdd|35499 : 510.0) no description available & (gnl|cdd|29257 : 158.0) no description available & (reliability: 1086.0) & (original description: Putative strap, Description = Serine-threonine kinase receptor-associated protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '29.4' 'protein.postranslational modification' 'niben101scf15109_26405-34640' '(at4g28880 : 566.0) casein kinase I-like 3 (ckl3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase I-like 4 (TAIR:AT4G28860.1); Has 64022 Blast hits to 63665 proteins in 2312 species: Archae - 48; Bacteria - 11126; Metazoa - 24220; Fungi - 7316; Plants - 9570; Viruses - 322; Other Eukaryotes - 11420 (source: NCBI BLink). & (gnl|cdd|36378 : 455.0) no description available & (gnl|cdd|29142 : 165.0) no description available & (reliability: 1132.0) & (original description: Putative CKL3, Description = Protein CASEIN KINASE I-LIKE 3, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf15224_70373-74426' '(at1g32640 : 518.0) Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif. Its transcription is induced by dehydration stress and ABA treatment. Negative regulator of blue lightñmediated photomorphogenic growth and blue and far-red-lightñregulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression.; MYC2; FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 13 processes; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: Basic helix-loop-helix (bHLH) DNA-binding family protein (TAIR:AT4G17880.1); Has 4078 Blast hits to 3762 proteins in 672 species: Archae - 2; Bacteria - 2; Metazoa - 761; Fungi - 108; Plants - 3150; Viruses - 25; Other Eukaryotes - 30 (source: NCBI BLink). & (p13027|arrs_maize : 99.0) Anthocyanin regulatory R-S protein - Zea mays (Maize) & (reliability: 1036.0) & (original description: Putative myc2, Description = MYC2, PFAM = PF00010;PF14215)' T '29.4' 'protein.postranslational modification' 'niben101scf15227_41350-74691' '(gnl|cdd|35419 : 158.0) no description available & (at4g36950 : 149.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 21 (MAPKKK21); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 19 (TAIR:AT5G67080.1); Has 107885 Blast hits to 106960 proteins in 3009 species: Archae - 125; Bacteria - 11734; Metazoa - 40866; Fungi - 11018; Plants - 26454; Viruses - 500; Other Eukaryotes - 17188 (source: NCBI BLink). & (gnl|cdd|47550 : 147.0) no description available & (reliability: 296.0) & (original description: Putative PGSC0003DMG400017082, Description = Fertilization-related kinase 1, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf15496_166960-173095' '(q75v63|sapk3_orysa : 530.0) Serine/threonine-protein kinase SAPK3 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 3) (Protein kinase REK) - Oryza sativa (Rice) & (at4g33950 : 503.0) Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network.; OPEN STOMATA 1 (OST1); FUNCTIONS IN: calcium-dependent protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 (TAIR:AT5G66880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35803 : 309.0) no description available & (gnl|cdd|47550 : 274.0) no description available & (reliability: 984.0) & (original description: Putative SAPK3, Description = Serine/threonine-protein kinase SAPK3, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf15671_22039-25716' '(at5g55560 : 455.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 3 (TAIR:AT3G48260.1); Has 100897 Blast hits to 100061 proteins in 3189 species: Archae - 71; Bacteria - 9572; Metazoa - 37309; Fungi - 9559; Plants - 27616; Viruses - 356; Other Eukaryotes - 16414 (source: NCBI BLink). & (gnl|cdd|35804 : 416.0) no description available & (gnl|cdd|29142 : 193.0) no description available & (q5qn75|m2k1_orysa : 97.4) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 910.0) & (original description: Putative WNK11, Description = Probable serine/threonine-protein kinase WNK11, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf16451_32042-40132' '(at1g64300 : 641.0) Protein kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF1221 (InterPro:IPR010632), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT5G41730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70237 : 273.0) no description available & (gnl|cdd|35413 : 201.0) no description available & (reliability: 1282.0) & (original description: Putative BnaA09g11580D, Description = BnaA09g11580D protein, PFAM = PF06760;PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf16516_137871-149272' '(at5g19280 : 622.0) kinase associated protein phosphatase composed of three domains: an amino-terminal signal anchor, a kinase interaction (KI) domain, and a type 2C protein phosphatase catalytic region; kinase associated protein phosphatase (KAPP); CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), SMAD/FHA domain (InterPro:IPR008984), Protein phosphatase 2C-related (InterPro:IPR001932), Kinase associated protein phosphatase (InterPro:IPR016660), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 2 (TAIR:AT4G31750.1); Has 4575 Blast hits to 4572 proteins in 441 species: Archae - 0; Bacteria - 429; Metazoa - 1040; Fungi - 314; Plants - 1891; Viruses - 3; Other Eukaryotes - 898 (source: NCBI BLink). & (gnl|cdd|29062 : 161.0) no description available & (gnl|cdd|35917 : 139.0) no description available & (reliability: 1244.0) & (original description: Putative KAPP, Description = Protein phosphatase 2C 70, PFAM = PF00498;PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf16663_14710-38564' '(at5g35410 : 708.0) encodes a member of the CBL-interacting protein kinase family, is a regulatory component controlling plant potassium nutrition; SALT OVERLY SENSITIVE 2 (SOS2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 8 (TAIR:AT4G24400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 536.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 348.0) no description available & (gnl|cdd|29142 : 286.0) no description available & (reliability: 1416.0) & (original description: Putative cipk, Description = Non-specific serine/threonine protein kinase, PFAM = PF00069;PF03822)' T '29.4' 'protein.postranslational modification' 'niben101scf16939_19095-30989' '(at3g25800 : 1037.0) one of three genes encoding the protein phosphatase 2A regulatory subunit; protein phosphatase 2A subunit A2 (PP2AA2); FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: response to cadmium ion, regulation of phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A subunit A3 (TAIR:AT1G13320.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p36875|2aaa_pea : 676.0) Protein phosphatase PP2A regulatory subunit A (PR65) (Fragment) - Pisum sativum (Garden pea) & (gnl|cdd|35432 : 625.0) no description available & (reliability: 2074.0) & (original description: Putative PP2AA2, Description = Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform, PFAM = PF13646;PF12755)' T '29.4' 'protein.postranslational modification' 'niben101scf17044_137763-143934' '(at5g50860 : 293.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: N-terminal protein myristoylation, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G54610.3); Has 127216 Blast hits to 125539 proteins in 4407 species: Archae - 96; Bacteria - 14251; Metazoa - 47558; Fungi - 13008; Plants - 31428; Viruses - 439; Other Eukaryotes - 20436 (source: NCBI BLink). & (gnl|cdd|35820 : 217.0) no description available & (gnl|cdd|47550 : 100.0) no description available & (reliability: 586.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf17180_16189-25735' '(at3g12620 : 565.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G55050.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35919 : 392.0) no description available & (gnl|cdd|29062 : 184.0) no description available & (reliability: 1130.0) & (original description: Putative pp2C2, Description = Serine/threonine phosphatase family, 2C domain protein, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf17372_15613-22700' '(at1g16220 : 558.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G79630.1); Has 5547 Blast hits to 5545 proteins in 292 species: Archae - 2; Bacteria - 12; Metazoa - 1332; Fungi - 643; Plants - 2421; Viruses - 5; Other Eukaryotes - 1132 (source: NCBI BLink). & (gnl|cdd|35917 : 201.0) no description available & (gnl|cdd|29062 : 183.0) no description available & (reliability: 1116.0) & (original description: Putative At1g16220, Description = Probable protein phosphatase 2C 6, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf18308_47044-50318' '(at4g30960 : 614.0) Encodes CBL-interacting protein kinase 6 (CIPK6). Required for development and salt tolerance.; SOS3-interacting protein 3 (SIP3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 20 (TAIR:AT5G45820.1); Has 129448 Blast hits to 127362 proteins in 4509 species: Archae - 159; Bacteria - 15496; Metazoa - 47121; Fungi - 13315; Plants - 31167; Viruses - 523; Other Eukaryotes - 21667 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 445.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|35803 : 334.0) no description available & (gnl|cdd|29142 : 288.0) no description available & (reliability: 1228.0) & (original description: Putative CIPK6, Description = CBL-interacting serine/threonine-protein kinase 6, PFAM = PF00069;PF03822)' T '29.4' 'protein.postranslational modification' 'niben101scf18343_113822-121382' '(at5g57035 : 717.0) U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination, response to stress; LOCATED IN: ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT2G19410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 263.0) no description available & (gnl|cdd|29142 : 161.0) no description available & (q8lpb4|pskr_dauca : 145.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1434.0) & (original description: Putative PUB34, Description = E3 ubiquitin ligase, PFAM = PF07714;PF00582;PF04564)' T '29.4' 'protein.postranslational modification' 'niben101scf18551_54903-60119' '(q84tc6|sapk2_orysa : 535.0) Serine/threonine-protein kinase SAPK2 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 2) - Oryza sativa (Rice) & (at4g33950 : 506.0) Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network.; OPEN STOMATA 1 (OST1); FUNCTIONS IN: calcium-dependent protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 (TAIR:AT5G66880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35803 : 301.0) no description available & (gnl|cdd|47550 : 267.0) no description available & (reliability: 1012.0) & (original description: Putative SAPK2, Description = Serine/threonine-protein kinase SAPK2, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf18967_17222-23130' '(at1g64300 : 719.0) Protein kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF1221 (InterPro:IPR010632), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT5G41730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70237 : 291.0) no description available & (gnl|cdd|35413 : 174.0) no description available & (reliability: 1438.0) & (original description: Putative At5g41730, Description = Protein kinase, PFAM = PF06760;PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf19171_149627-165855' '(at1g04210 : 1033.0) Encodes a putative Raf-related kinase.; Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G31170.3); Has 130301 Blast hits to 104916 proteins in 2869 species: Archae - 120; Bacteria - 15185; Metazoa - 50195; Fungi - 9983; Plants - 37286; Viruses - 367; Other Eukaryotes - 17165 (source: NCBI BLink). & (gnl|cdd|29142 : 139.0) no description available & (gnl|cdd|35413 : 122.0) no description available & (reliability: 2066.0) & (original description: Putative BnaA10g02470D, Description = BnaA10g02470D protein, PFAM = PF14381;PF00069;PF13855)' T '29.4' 'protein.postranslational modification' 'niben101scf20000_60432-80708' '(at5g28850 : 791.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G28900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37773 : 605.0) no description available & (reliability: 1582.0) & (original description: Putative BnaCnng72610D, Description = BnaCnng72610D protein, PFAM = PF13499)' T '29.4' 'protein.postranslational modification' 'niben101scf20666_11513-16848' '(p51824|arf1_soltu : 89.7) ADP-ribosylation factor 1 - Solanum tuberosum (Potato) & (at3g62290 : 88.6) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.; ADP-ribosylation factor A1E (ARFA1E); CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), Ras small GTPase, Rab type (InterPro:IPR003579), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT2G47170.1). & (gnl|cdd|58033 : 85.7) no description available & (reliability: 177.2) & (original description: Putative arf1, Description = ADP-ribosylation factor 1, PFAM = PF00025)' T '29.4' 'protein.postranslational modification' 'niben101scf21735_37933-46746' '(at5g53140 : 447.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G10740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35917 : 254.0) no description available & (gnl|cdd|29062 : 247.0) no description available & (reliability: 894.0) & (original description: Putative pp2C, Description = Protein phosphatase 2C, PFAM = PF00481)' T '29.4' 'protein.postranslational modification' 'niben101scf21770_21856-36615' '(at4g03080 : 1422.0) BRI1 suppressor 1 (BSU1)-like 1 (BSL1); FUNCTIONS IN: protein binding, protein serine/threonine phosphatase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Metallophosphoesterase (InterPro:IPR004843), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: Serine/threonine protein phosphatase family protein (TAIR:AT1G03445.1); Has 11450 Blast hits to 9180 proteins in 548 species: Archae - 80; Bacteria - 322; Metazoa - 3883; Fungi - 1977; Plants - 2720; Viruses - 6; Other Eukaryotes - 2462 (source: NCBI BLink). & (q60ex6|bsl1_orysa : 1323.0) Serine/threonine protein phosphatase BSL1 homolog (EC 3.1.3.16) (BSU1-like protein 1 homolog) - Oryza sativa (Rice) & (gnl|cdd|35595 : 378.0) no description available & (gnl|cdd|29063 : 323.0) no description available & (reliability: 2844.0) & (original description: Putative BSL1, Description = Serine/threonine-protein phosphatase BSL1 homolog, PFAM = PF00149;PF13854)' T '29.4' 'protein.postranslational modification' 'niben101scf23113_13947-36438' '(at2g40730 : 1048.0) Protein kinase family protein with ARM repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-like helical (InterPro:IPR011989), Serine/threonine-protein kinase domain (InterPro:IPR002290), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G71410.1); Has 4566 Blast hits to 2083 proteins in 348 species: Archae - 0; Bacteria - 278; Metazoa - 876; Fungi - 585; Plants - 192; Viruses - 19; Other Eukaryotes - 2616 (source: NCBI BLink). & (gnl|cdd|36457 : 538.0) no description available & (reliability: 2096.0) & (original description: Putative NTKL, Description = NTKL, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf23113_17342-29828' '(at2g40730 : 288.0) Protein kinase family protein with ARM repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-like helical (InterPro:IPR011989), Serine/threonine-protein kinase domain (InterPro:IPR002290), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G71410.1); Has 4566 Blast hits to 2083 proteins in 348 species: Archae - 0; Bacteria - 278; Metazoa - 876; Fungi - 585; Plants - 192; Viruses - 19; Other Eukaryotes - 2616 (source: NCBI BLink). & (gnl|cdd|36457 : 138.0) no description available & (reliability: 576.0) & (original description: Putative SCYL1, Description = Putative inactive serine/threonine-protein kinase scy1, PFAM = PF07714)' T '29.4' 'protein.postranslational modification' 'niben101scf25021_7847-12127' '(at5g21222 : 592.0) protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), CBL-interacting protein kinase (InterPro:IPR020660), Pentatricopeptide repeat (InterPro:IPR002885), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G25630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q76c99|rf1_orysa : 199.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1184.0) & (original description: Putative At5g25630, Description = Pentatricopeptide repeat-containing protein At5g25630, PFAM = PF13041;PF13041;PF13041;PF13041;PF13041)' T '29.4' 'protein.postranslational modification' 'niben101scf27305_77328-93859' '(at5g63610 : 649.0) significant sequence similarity to plant and animal cyclin-dependent protein kinases, and was classified as an E-type CDK with a SPTAIRE cyclin binding motif in the kinase domain.; cyclin-dependent kinase E;1 (CDKE;1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G67580.2); Has 122304 Blast hits to 120929 proteins in 4501 species: Archae - 96; Bacteria - 13482; Metazoa - 46432; Fungi - 12531; Plants - 29277; Viruses - 477; Other Eukaryotes - 20009 (source: NCBI BLink). & (gnl|cdd|35885 : 488.0) no description available & (gnl|cdd|47550 : 250.0) no description available & (p29619|cdc22_orysa : 226.0) Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Oryza sativa (Rice) & (reliability: 1298.0) & (original description: Putative cdk8, Description = Cyclin-dependent kinase 8, PFAM = PF00069)' T '29.4' 'protein.postranslational modification' 'niben101scf28762_26592-30309' '(gnl|cdd|85563 : 576.0) no description available & (at3g26020 : 551.0) Encodes protein phosphatase 2A (PP2A) B'eta subunit. Targeted to nucleus and cytosol.; Protein phosphatase 2A regulatory B subunit family protein; FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: cytosol, nucleus, protein phosphatase type 2A complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT1G13460.2); Has 1197 Blast hits to 1175 proteins in 189 species: Archae - 0; Bacteria - 2; Metazoa - 578; Fungi - 161; Plants - 301; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|37296 : 515.0) no description available & (reliability: 1102.0) & (original description: Putative Sb06g020625, Description = Putative uncharacterized protein Sb06g020625, PFAM = PF01603)' T '29.4' 'protein.postranslational modification' 'niben101scf30081_47801-57901' '(at5g09890 : 784.0) Protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT4G14350.2); Has 109819 Blast hits to 108536 proteins in 3259 species: Archae - 120; Bacteria - 13353; Metazoa - 38509; Fungi - 11858; Plants - 26725; Viruses - 411; Other Eukaryotes - 18843 (source: NCBI BLink). & (gnl|cdd|35825 : 664.0) no description available & (gnl|cdd|47550 : 270.0) no description available & (p47997|g11a_orysa : 173.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 1568.0) & (original description: Putative trc, Description = Serine/threonine-protein kinase CBK1, PFAM = PF00069;PF00433)' T '29.4' 'protein.postranslational modification' 'niben101scf32086_64135-74961' '(at1g34750 : 427.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: phytochrome-associated protein phosphatase type 2C (TAIR:AT1G22280.1); Has 7616 Blast hits to 7609 proteins in 922 species: Archae - 14; Bacteria - 1457; Metazoa - 1483; Fungi - 777; Plants - 2623; Viruses - 11; Other Eukaryotes - 1251 (source: NCBI BLink). & (gnl|cdd|35917 : 246.0) no description available & (gnl|cdd|29062 : 229.0) no description available & (reliability: 854.0) & (original description: Putative At1g34750, Description = Probable protein phosphatase 2C 10, PFAM = PF00481)' T '29.4.1' 'protein.postranslational modification.kinase' 'nbv0.3scaffold2108_20768-27482' '(q75lr7|sapk1_orysa : 442.0) Serine/threonine-protein kinase SAPK1 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 1) - Oryza sativa (Rice) & (at4g33950 : 406.0) Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network.; OPEN STOMATA 1 (OST1); FUNCTIONS IN: calcium-dependent protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 (TAIR:AT5G66880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35803 : 258.0) no description available & (gnl|cdd|29142 : 230.0) no description available & (reliability: 812.0) & (original description: Putative pk5, Description = Serine/threonine-protein kinase SAPK7, PFAM = PF07714;PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'nbv0.3scaffold2188_54513-61387' '(at2g17890 : 781.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 16 (CPK16); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 18 (TAIR:AT4G36070.1); Has 126765 Blast hits to 124478 proteins in 3942 species: Archae - 195; Bacteria - 14619; Metazoa - 47448; Fungi - 14527; Plants - 27603; Viruses - 509; Other Eukaryotes - 21864 (source: NCBI BLink). & (p53681|crk_dauca : 424.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 364.0) no description available & (gnl|cdd|47550 : 260.0) no description available & (reliability: 1556.0) & (original description: Putative CPK28, Description = Calcium-dependent protein kinase 28, PFAM = PF00069;PF13499;PF13202)' T '29.4.1' 'protein.postranslational modification.kinase' 'nbv0.3scaffold5257_48307-52664' '(gnl|cdd|35804 : 433.0) no description available & (at3g48260 : 409.0) Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases.; with no lysine (K) kinase 3 (WNK3); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 2 (TAIR:AT3G22420.1); Has 106620 Blast hits to 105555 proteins in 3648 species: Archae - 79; Bacteria - 10632; Metazoa - 39040; Fungi - 10406; Plants - 28734; Viruses - 420; Other Eukaryotes - 17309 (source: NCBI BLink). & (gnl|cdd|47550 : 167.0) no description available & (q336x9|mpk6_orysa : 82.0) Mitogen-activated protein kinase 6 (EC 2.7.11.24) (MAP kinase 6) - Oryza sativa (Rice) & (reliability: 766.0) & (original description: Putative oipk, Description = WNK kinase, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'nbv0.3scaffold8606_1562-27357' '(at4g13020 : 511.0) Encodes a member of the cdc2+ family of protein kinases MHK. Similar to the mak genes of rats. mak encodes a protein kinase that may play a role in spermatogenesis.; MHK; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G19110.2). & (gnl|cdd|35880 : 437.0) no description available & (gnl|cdd|29142 : 260.0) no description available & (p23111|cdc2_maize : 194.0) Cell division control protein 2 homolog (EC 2.7.11.22) (EC 2.7.11.23) (p34cdc2) - Zea mays (Maize) & (reliability: 1022.0) & (original description: Putative crk2, Description = Putative Cdc2-related protein kinase CRK2, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'nbv0.3scaffold16840_1877-9091' '(at5g66210 : 767.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p53681|crk_dauca : 439.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 371.0) no description available & (gnl|cdd|29142 : 261.0) no description available & (reliability: 1534.0) & (original description: Putative CPK16, Description = Calcium-dependent protein kinase 16, PFAM = PF13202;PF13499;PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'nbv0.3scaffold27317_22733-27079' '(at3g04910 : 698.0) Serine/threonine protein kinase, whose transcription is regulated by circadian rhythm.; with no lysine (K) kinase 1 (WNK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, circadian rhythm; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G28080.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35804 : 594.0) no description available & (gnl|cdd|47550 : 183.0) no description available & (q5qn75|m2k1_orysa : 96.3) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1396.0) & (original description: Putative WNK1, Description = Serine/threonine-protein kinase WNK1, PFAM = PF00069;PF12202)' T '29.4.1' 'protein.postranslational modification.kinase' 'nbv0.3scaffold34119_4011-7799' '(q84tc6|sapk2_orysa : 183.0) Serine/threonine-protein kinase SAPK2 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 2) - Oryza sativa (Rice) & (at1g78290 : 181.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to karrikin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G33950.1); Has 112604 Blast hits to 110873 proteins in 3029 species: Archae - 114; Bacteria - 13128; Metazoa - 41421; Fungi - 12195; Plants - 25871; Viruses - 459; Other Eukaryotes - 19416 (source: NCBI BLink). & (gnl|cdd|29142 : 108.0) no description available & (gnl|cdd|35803 : 107.0) no description available & (reliability: 346.0) & (original description: Putative pk5, Description = Serine/threonine-protein kinase SAPK7, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'nbv0.3scaffold56851_6040-12252' '(at1g54610 : 713.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G05050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35820 : 659.0) no description available & (gnl|cdd|29142 : 247.0) no description available & (q05006|cdc22_medsa : 221.0) Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Medicago sativa (Alfalfa) & (reliability: 1426.0) & (original description: Putative crk1, Description = CRK1 protein, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'nbv0.3scaffold56859_1-7616' '(at3g01090 : 419.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase; SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02723|rkin1_secce : 343.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (gnl|cdd|35803 : 295.0) no description available & (gnl|cdd|29142 : 259.0) no description available & (reliability: 838.0) & (original description: Putative SNF1, Description = SNF1, PFAM = PF00069;PF02149)' T '29.4.1' 'protein.postranslational modification.kinase' 'nbv0.3scaffold57063_1461-11702' '(at3g24715 : 519.0) Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: PB1 domain-containing protein tyrosine kinase (TAIR:AT1G04700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 312.0) no description available & (gnl|cdd|87344 : 257.0) no description available & (q8l4h4|nork_medtr : 104.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1038.0) & (original description: Putative STY2, Description = Serine/threonine-protein kinase CTR1, PFAM = PF00564;PF07714)' T '29.4.1' 'protein.postranslational modification.kinase' 'nbv0.3scaffold62960_2769-9693' '(at5g47080 : 382.0) Regulatory subunit beta of casein kinase II. purified CKB1 resulted in up 100-fold stimulation of casein kinase activity compared with the CKA1 activity alone. Forms a tetrameric complex with CKA1 (CKA1(2)CKB1(2)).; casein kinase II beta chain 1 (CKB1); CONTAINS InterPro DOMAIN/s: Casein kinase II, regulatory subunit, alpha-helical (InterPro:IPR016149), Casein kinase II, regulatory subunit, beta-sheet (InterPro:IPR016150), Casein kinase II, regulatory subunit (InterPro:IPR000704); BEST Arabidopsis thaliana protein match is: casein kinase II beta chain 2 (TAIR:AT4G17640.2). & (gnl|cdd|38302 : 355.0) no description available & (gnl|cdd|65042 : 305.0) no description available & (reliability: 714.0) & (original description: Putative ck2b, Description = CK II beta, PFAM = PF01214)' T '29.4.1' 'protein.postranslational modification.kinase' 'nbv0.5scaffold20_341013-442831' '(at3g48190 : 3285.0) encodes a homolog of the human ATM gene, which is mutated in ataxia telangiectasia, a chromosome instability disorder. Characterization of mutants suggest a role in repairing DNA in response to ionizing radiation as well as during meiosis. The protein has kinase domains and shows kinase activity in orthologs. There is also evidence that ATM might be involved in the telomerase-independent process known as Alternative Lengthening of Telomeres.; ataxia-telangiectasia mutated (ATM); FUNCTIONS IN: 1-phosphatidylinositol-3-phosphate 5-kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), PIK-related kinase, FAT (InterPro:IPR003151), Ataxia-Telangiectasia Mutated (InterPro:IPR015519), PIK-related kinase (InterPro:IPR014009), PWWP (InterPro:IPR000313), PIK-related kinase, FATC (InterPro:IPR003152), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Ataxia telangiectasia-mutated and RAD3-related (TAIR:AT5G40820.1); Has 3479 Blast hits to 3364 proteins in 268 species: Archae - 0; Bacteria - 7; Metazoa - 1400; Fungi - 858; Plants - 531; Viruses - 0; Other Eukaryotes - 683 (source: NCBI BLink). & (gnl|cdd|36110 : 1112.0) no description available & (gnl|cdd|73241 : 340.0) no description available & (q5z987|atr_orysa : 245.0) Serine/threonine-protein kinase ATR (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 6570.0) & (original description: Putative ATM, Description = ATM protein, PFAM = PF00454;PF02260)' T '29.4.1' 'protein.postranslational modification.kinase' 'nbv0.5scaffold443_607245-614363' '(at4g33950 : 582.0) Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network.; OPEN STOMATA 1 (OST1); FUNCTIONS IN: calcium-dependent protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 (TAIR:AT5G66880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q75h77|sapka_orysa : 576.0) Serine/threonine-protein kinase SAPK10 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 10) - Oryza sativa (Rice) & (gnl|cdd|35803 : 300.0) no description available & (gnl|cdd|29142 : 263.0) no description available & (reliability: 1164.0) & (original description: Putative SRK2I, Description = Serine/threonine-protein kinase SRK2I, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'nbv0.5scaffold711_375143-384597' '(gnl|cdd|35820 : 305.0) no description available & (at1g09600 : 270.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G57700.1); Has 123498 Blast hits to 122030 proteins in 4353 species: Archae - 93; Bacteria - 13546; Metazoa - 45885; Fungi - 12568; Plants - 30937; Viruses - 467; Other Eukaryotes - 20002 (source: NCBI BLink). & (gnl|cdd|29142 : 161.0) no description available & (q38772|cdc2a_antma : 157.0) Cell division control protein 2 homolog A (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (reliability: 540.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'nbv0.5scaffold889_157853-160442' '(q75lr7|sapk1_orysa : 213.0) Serine/threonine-protein kinase SAPK1 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 1) - Oryza sativa (Rice) & (at1g10940 : 211.0) Encodes a plant protein kinase similar to the calcium/calmodulin-dependent protein kinase subfamily and the SNF1 kinase subfamily (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Kinase activity of its homolog in tobacco is induced by hyperosmotic condition within 1 minute.; Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: SNF1-related protein kinase 2.10 (TAIR:AT1G60940.2). & (gnl|cdd|35803 : 135.0) no description available & (gnl|cdd|47550 : 128.0) no description available & (reliability: 420.0) & (original description: Putative pk5, Description = Serine/threonine-protein kinase SAPK7, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'nbv0.5scaffold1301_219067-232316' '(at3g24715 : 521.0) Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: PB1 domain-containing protein tyrosine kinase (TAIR:AT1G04700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 315.0) no description available & (gnl|cdd|87344 : 262.0) no description available & (q8l4h4|nork_medtr : 103.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1042.0) & (original description: Putative STY2, Description = Serine/threonine-protein kinase CTR1, PFAM = PF07714;PF00564)' T '29.4.1' 'protein.postranslational modification.kinase' 'nbv0.5scaffold1345_34932-42671' '(at3g01090 : 422.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase; SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02723|rkin1_secce : 345.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (gnl|cdd|35803 : 298.0) no description available & (gnl|cdd|29142 : 262.0) no description available & (reliability: 844.0) & (original description: Putative snfA, Description = 5'-AMP-activated protein kinase catalytic subunit alpha-2, PFAM = PF00069;PF02149)' T '29.4.1' 'protein.postranslational modification.kinase' 'nbv0.5scaffold1579_250377-316340' '(at4g13020 : 385.0) Encodes a member of the cdc2+ family of protein kinases MHK. Similar to the mak genes of rats. mak encodes a protein kinase that may play a role in spermatogenesis.; MHK; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G19110.2). & (gnl|cdd|35880 : 337.0) no description available & (gnl|cdd|29142 : 221.0) no description available & (q53n72|mpk15_orysa : 141.0) Mitogen-activated protein kinase 15 (EC 2.7.11.24) (MAP kinase 15) - Oryza sativa (Rice) & (reliability: 770.0) & (original description: Putative crk2, Description = Serine/threonine-protein kinase MAK, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'nbv0.5scaffold1969_676-11530' '(at3g01090 : 822.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase; SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02723|rkin1_secce : 632.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (gnl|cdd|35808 : 369.0) no description available & (gnl|cdd|29142 : 311.0) no description available & (reliability: 1644.0) & (original description: Putative KIN10, Description = SNF1-related protein kinase catalytic subunit alpha KIN10, PFAM = PF00627;PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'nbv0.5scaffold3149_16645-22966' '(at2g22560 : 529.0) Kinase interacting (KIP1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT5G10500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71206 : 121.0) no description available & (reliability: 1058.0) & (original description: Putative KIP1, Description = Kinase-interacting protein 1, PFAM = PF07765)' T '29.4.1' 'protein.postranslational modification.kinase' 'nbv0.5scaffold3262_244908-253328' '(at1g54610 : 723.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G05050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35820 : 661.0) no description available & (gnl|cdd|29142 : 253.0) no description available & (q38772|cdc2a_antma : 227.0) Cell division control protein 2 homolog A (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (reliability: 1446.0) & (original description: Putative crk1, Description = CRK1 protein, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'nbv0.5scaffold3379_175372-182349' '(at2g17890 : 786.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 16 (CPK16); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 18 (TAIR:AT4G36070.1); Has 126765 Blast hits to 124478 proteins in 3942 species: Archae - 195; Bacteria - 14619; Metazoa - 47448; Fungi - 14527; Plants - 27603; Viruses - 509; Other Eukaryotes - 21864 (source: NCBI BLink). & (p53681|crk_dauca : 429.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 367.0) no description available & (gnl|cdd|47550 : 269.0) no description available & (reliability: 1554.0) & (original description: Putative CPK16, Description = Calcium-dependent protein kinase 16, PFAM = PF00069;PF13499;PF13202)' T '29.4.1' 'protein.postranslational modification.kinase' 'nbv0.5scaffold3699_125086-135327' '(at3g24715 : 518.0) Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: PB1 domain-containing protein tyrosine kinase (TAIR:AT1G04700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 311.0) no description available & (gnl|cdd|87344 : 258.0) no description available & (q8l4h4|nork_medtr : 104.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1036.0) & (original description: Putative STY2, Description = Serine/threonine-protein kinase CTR1, PFAM = PF07714;PF00564)' T '29.4.1' 'protein.postranslational modification.kinase' 'nbv0.5scaffold4417_1-3305' '(gnl|cdd|35820 : 464.0) no description available & (at1g54610 : 411.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G05050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29142 : 241.0) no description available & (q38772|cdc2a_antma : 222.0) Cell division control protein 2 homolog A (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (reliability: 822.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'nbv0.5scaffold4417_150-3068' '(gnl|cdd|35820 : 198.0) no description available & (at1g54610 : 187.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G05050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29142 : 95.3) no description available & (reliability: 374.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'nbv0.5scaffold4581_28793-33869' '(at3g04910 : 764.0) Serine/threonine protein kinase, whose transcription is regulated by circadian rhythm.; with no lysine (K) kinase 1 (WNK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, circadian rhythm; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G28080.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35804 : 642.0) no description available & (gnl|cdd|47550 : 197.0) no description available & (q5qn75|m2k1_orysa : 96.3) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1528.0) & (original description: Putative WNK1, Description = Serine/threonine-protein kinase WNK1, PFAM = PF12202;PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'nbv0.5scaffold7913_1-6139' '(at3g01090 : 697.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase; SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02723|rkin1_secce : 580.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (gnl|cdd|35808 : 352.0) no description available & (gnl|cdd|29142 : 300.0) no description available & (reliability: 1394.0) & (original description: Putative PKIN1, Description = SNF1-related protein kinase, PFAM = PF00069;PF02149)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben044scf00000901ctg013_71-5949' '(p51139|msk3_medsa : 183.0) Glycogen synthase kinase-3 homolog MsK-3 (EC 2.7.11.1) - Medicago sativa (Alfalfa) & (at5g14640 : 181.0) shaggy-like kinase 13 (SK13); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: response to salt stress, hyperosmotic response; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: shaggy-related kinase 11 (TAIR:AT5G26751.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35877 : 146.0) no description available & (reliability: 338.0) & (original description: Putative shag, Description = Shaggy-related protein kinase theta, PFAM = )' T '29.4.1' 'protein.postranslational modification.kinase' 'niben044scf00002524ctg006_745-9394' '(at1g54610 : 688.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G05050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35820 : 624.0) no description available & (gnl|cdd|29142 : 261.0) no description available & (q38772|cdc2a_antma : 221.0) Cell division control protein 2 homolog A (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (reliability: 1376.0) & (original description: Putative crk1, Description = CRK1 protein, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben044scf00002714ctg003_11210-18366' '(at2g17890 : 833.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 16 (CPK16); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 18 (TAIR:AT4G36070.1); Has 126765 Blast hits to 124478 proteins in 3942 species: Archae - 195; Bacteria - 14619; Metazoa - 47448; Fungi - 14527; Plants - 27603; Viruses - 509; Other Eukaryotes - 21864 (source: NCBI BLink). & (p53681|crk_dauca : 450.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 369.0) no description available & (gnl|cdd|47550 : 265.0) no description available & (reliability: 1662.0) & (original description: Putative CPK16, Description = Calcium-dependent protein kinase 16, PFAM = PF00069;PF13833;PF13499)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben044scf00003378ctg004_2648-11352' '(at4g13020 : 556.0) Encodes a member of the cdc2+ family of protein kinases MHK. Similar to the mak genes of rats. mak encodes a protein kinase that may play a role in spermatogenesis.; MHK; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G19110.2). & (gnl|cdd|35880 : 443.0) no description available & (gnl|cdd|29142 : 267.0) no description available & (q53n72|mpk15_orysa : 196.0) Mitogen-activated protein kinase 15 (EC 2.7.11.24) (MAP kinase 15) - Oryza sativa (Rice) & (reliability: 1112.0) & (original description: Putative crk2, Description = Putative Cdc2-related protein kinase CRK2, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben044scf00004422ctg000_3268-5648' '(q84tc6|sapk2_orysa : 184.0) Serine/threonine-protein kinase SAPK2 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 2) - Oryza sativa (Rice) & (at1g78290 : 181.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to karrikin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G33950.1); Has 112604 Blast hits to 110873 proteins in 3029 species: Archae - 114; Bacteria - 13128; Metazoa - 41421; Fungi - 12195; Plants - 25871; Viruses - 459; Other Eukaryotes - 19416 (source: NCBI BLink). & (gnl|cdd|29142 : 107.0) no description available & (gnl|cdd|35803 : 106.0) no description available & (reliability: 344.0) & (original description: Putative pk5, Description = Serine/threonine-protein kinase SAPK7, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben044scf00005903ctg007_2027-5280' '(at1g09840 : 268.0) shaggy-like protein kinase 41 (SK41); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: shaggy-like kinase 42 (TAIR:AT1G57870.2); Has 102931 Blast hits to 101896 proteins in 3684 species: Archae - 93; Bacteria - 10743; Metazoa - 37496; Fungi - 11700; Plants - 24573; Viruses - 362; Other Eukaryotes - 17964 (source: NCBI BLink). & (p51139|msk3_medsa : 237.0) Glycogen synthase kinase-3 homolog MsK-3 (EC 2.7.11.1) - Medicago sativa (Alfalfa) & (gnl|cdd|35877 : 202.0) no description available & (gnl|cdd|29142 : 82.6) no description available & (reliability: 530.0) & (original description: Putative trK, Description = Shaggy-related protein kinase theta, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben044scf00009456ctg005_8759-14565' '(q75lr7|sapk1_orysa : 518.0) Serine/threonine-protein kinase SAPK1 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 1) - Oryza sativa (Rice) & (at1g78290 : 489.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to karrikin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G33950.1); Has 112604 Blast hits to 110873 proteins in 3029 species: Archae - 114; Bacteria - 13128; Metazoa - 41421; Fungi - 12195; Plants - 25871; Viruses - 459; Other Eukaryotes - 19416 (source: NCBI BLink). & (gnl|cdd|35803 : 299.0) no description available & (gnl|cdd|47550 : 270.0) no description available & (reliability: 974.0) & (original description: Putative SAPK1, Description = Serine/threonine-protein kinase SAPK1, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben044scf00010086ctg002_2823-7758' '(at4g29810 : 504.0) encodes a MAP kinase kinase 2 that regulates MPK6 and MPK4 in response to cold and salt stresses. Co-expression with MEKK1 in protoplasts activated MKK2 activity, suggesting that MEKK1 may be a regulator of MKK2.; MAP kinase kinase 2 (MKK2); FUNCTIONS IN: MAP kinase kinase activity, kinase activity; INVOLVED IN: cold acclimation, MAPKKK cascade, response to salt stress, response to cold, defense response, incompatible interaction; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: MAP kinase/ ERK kinase 1 (TAIR:AT4G26070.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35801 : 425.0) no description available & (q5qn75|m2k1_orysa : 415.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 255.0) no description available & (reliability: 1008.0) & (original description: Putative mek1, Description = MAP kinase kinase, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben044scf00019931ctg002_18-9292' '(at3g01090 : 856.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase; SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02723|rkin1_secce : 660.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (gnl|cdd|35808 : 368.0) no description available & (gnl|cdd|29142 : 310.0) no description available & (reliability: 1712.0) & (original description: Putative KIN10, Description = SNF1-related protein kinase catalytic subunit alpha KIN10, PFAM = PF02149;PF00069;PF00627)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben044scf00026432ctg003_4135-9410' '(at3g48190 : 110.0) encodes a homolog of the human ATM gene, which is mutated in ataxia telangiectasia, a chromosome instability disorder. Characterization of mutants suggest a role in repairing DNA in response to ionizing radiation as well as during meiosis. The protein has kinase domains and shows kinase activity in orthologs. There is also evidence that ATM might be involved in the telomerase-independent process known as Alternative Lengthening of Telomeres.; ataxia-telangiectasia mutated (ATM); FUNCTIONS IN: 1-phosphatidylinositol-3-phosphate 5-kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), PIK-related kinase, FAT (InterPro:IPR003151), Ataxia-Telangiectasia Mutated (InterPro:IPR015519), PIK-related kinase (InterPro:IPR014009), PWWP (InterPro:IPR000313), PIK-related kinase, FATC (InterPro:IPR003152), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Ataxia telangiectasia-mutated and RAD3-related (TAIR:AT5G40820.1); Has 3479 Blast hits to 3364 proteins in 268 species: Archae - 0; Bacteria - 7; Metazoa - 1400; Fungi - 858; Plants - 531; Viruses - 0; Other Eukaryotes - 683 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative PGSC0003DMG400026995, Description = , PFAM = PF00855)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben044scf00027230ctg002_332-4213' '(q75lr7|sapk1_orysa : 270.0) Serine/threonine-protein kinase SAPK1 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 1) - Oryza sativa (Rice) & (at4g33950 : 244.0) Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network.; OPEN STOMATA 1 (OST1); FUNCTIONS IN: calcium-dependent protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 (TAIR:AT5G66880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35803 : 152.0) no description available & (gnl|cdd|47550 : 122.0) no description available & (reliability: 488.0) & (original description: Putative pco069505(751), Description = Putative snRK/SAPK family protein kinase, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben044scf00040676ctg001_1-5929' '(q75v63|sapk3_orysa : 514.0) Serine/threonine-protein kinase SAPK3 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 3) (Protein kinase REK) - Oryza sativa (Rice) & (at4g33950 : 486.0) Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network.; OPEN STOMATA 1 (OST1); FUNCTIONS IN: calcium-dependent protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 (TAIR:AT5G66880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35803 : 302.0) no description available & (gnl|cdd|47550 : 268.0) no description available & (reliability: 972.0) & (original description: Putative SAPK3, Description = Serine/threonine-protein kinase SAPK3, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben044scf00057883ctg001_1810-14065' '(at5g03420 : 108.0) 5'-AMP-activated protein kinase-related; BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase-related (TAIR:AT1G27070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative At5g03420, Description = Putative ovule protein, PFAM = )' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf00058_1032563-1037883' '(at3g04910 : 729.0) Serine/threonine protein kinase, whose transcription is regulated by circadian rhythm.; with no lysine (K) kinase 1 (WNK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, circadian rhythm; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G28080.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35804 : 622.0) no description available & (gnl|cdd|47550 : 194.0) no description available & (q5qn75|m2k1_orysa : 94.4) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1458.0) & (original description: Putative WNK1, Description = Serine/threonine-protein kinase WNK1, PFAM = PF12202;PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf00063_510003-516210' '(at3g01090 : 731.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase; SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02723|rkin1_secce : 620.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (gnl|cdd|35808 : 362.0) no description available & (gnl|cdd|29142 : 306.0) no description available & (reliability: 1462.0) & (original description: Putative KIN10, Description = SNF1-related protein kinase catalytic subunit alpha KIN10, PFAM = PF02149;PF00069;PF00627)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf00201_44689-51613' '(at2g44680 : 417.0) Encodes casein kinase II beta chain, a CK2 regulatory subunit. Nuclear-localized CKB4 protein exists in vivo as different isoforms, resulting from phosphorylation on serine residues. The phosphorylated isoforms are the preferred substrate for ubiquitination and degradation by the proteasome pathway. Involved in regulation of circadian clock.; casein kinase II beta subunit 4 (CKB4); CONTAINS InterPro DOMAIN/s: Casein kinase II, regulatory subunit, alpha-helical (InterPro:IPR016149), Casein kinase II, regulatory subunit, beta-sheet (InterPro:IPR016150), Casein kinase II, regulatory subunit (InterPro:IPR000704); BEST Arabidopsis thaliana protein match is: casein kinase II beta chain 3 (TAIR:AT3G60250.2); Has 1093 Blast hits to 1091 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 429; Fungi - 285; Plants - 156; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (gnl|cdd|38302 : 356.0) no description available & (gnl|cdd|65042 : 306.0) no description available & (reliability: 754.0) & (original description: Putative CKB1, Description = Casein kinase II subunit beta, PFAM = PF01214)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf00276_542544-554347' '(at1g09720 : 333.0) Kinase interacting (KIP1-like) family protein; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: kinase interacting family protein (TAIR:AT1G58210.1); Has 36531 Blast hits to 24166 proteins in 1497 species: Archae - 615; Bacteria - 4202; Metazoa - 18004; Fungi - 3193; Plants - 2001; Viruses - 107; Other Eukaryotes - 8409 (source: NCBI BLink). & (gnl|cdd|71206 : 130.0) no description available & (reliability: 650.0) & (original description: Putative BnaA09g42470D, Description = BnaA09g42470D protein, PFAM = PF07765)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf00735_6280-14623' '(at3g12200 : 353.0) Encodes AtNek7, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.; NIMA-related kinase 7 (Nek7); FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: NIMA-related kinase 5 (TAIR:AT3G20860.1). & (gnl|cdd|35809 : 306.0) no description available & (gnl|cdd|29142 : 213.0) no description available & (q5qn75|m2k1_orysa : 83.2) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 666.0) & (original description: Putative stkc, Description = Serine/threonine-protein kinase Nek5, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf01072_66877-74039' '(q75v63|sapk3_orysa : 516.0) Serine/threonine-protein kinase SAPK3 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 3) (Protein kinase REK) - Oryza sativa (Rice) & (at4g33950 : 487.0) Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network.; OPEN STOMATA 1 (OST1); FUNCTIONS IN: calcium-dependent protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 (TAIR:AT5G66880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35803 : 305.0) no description available & (gnl|cdd|47550 : 271.0) no description available & (reliability: 974.0) & (original description: Putative SAPK3, Description = Serine/threonine-protein kinase SAPK3, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf01072_69817-437292' '(q84tc6|sapk2_orysa : 211.0) Serine/threonine-protein kinase SAPK2 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 2) - Oryza sativa (Rice) & (at1g78290 : 209.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to karrikin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G33950.1); Has 112604 Blast hits to 110873 proteins in 3029 species: Archae - 114; Bacteria - 13128; Metazoa - 41421; Fungi - 12195; Plants - 25871; Viruses - 459; Other Eukaryotes - 19416 (source: NCBI BLink). & (gnl|cdd|35803 : 134.0) no description available & (gnl|cdd|29142 : 131.0) no description available & (reliability: 416.0) & (original description: Putative pk5, Description = Serine/threonine-protein kinase SAPK7, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf01188_1035653-1045269' '(at2g44680 : 400.0) Encodes casein kinase II beta chain, a CK2 regulatory subunit. Nuclear-localized CKB4 protein exists in vivo as different isoforms, resulting from phosphorylation on serine residues. The phosphorylated isoforms are the preferred substrate for ubiquitination and degradation by the proteasome pathway. Involved in regulation of circadian clock.; casein kinase II beta subunit 4 (CKB4); CONTAINS InterPro DOMAIN/s: Casein kinase II, regulatory subunit, alpha-helical (InterPro:IPR016149), Casein kinase II, regulatory subunit, beta-sheet (InterPro:IPR016150), Casein kinase II, regulatory subunit (InterPro:IPR000704); BEST Arabidopsis thaliana protein match is: casein kinase II beta chain 3 (TAIR:AT3G60250.2); Has 1093 Blast hits to 1091 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 429; Fungi - 285; Plants - 156; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (gnl|cdd|38302 : 356.0) no description available & (gnl|cdd|65042 : 305.0) no description available & (reliability: 726.0) & (original description: Putative ck2b, Description = CK II beta, PFAM = PF01214)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf01235_131666-136230' '(at2g25880 : 526.0) Encodes a member of a family of Ser/Thr kinases whose activities peak during cell division. Transcripts are abundant in tissues rich in dividing cells like roots and flowers but are low or absent in fully expanded leaves and stems. In interphase cells, the protein is predominantly nuclear. During mitosis, the protein associates with plant-specific cytoskeletal structures (preprophase band, phragmoplast, nascent cell plate) that are necessary for cytokinesis as well as with the microtubule spindle.; ataurora2 (AUR2); CONTAINS InterPro DOMAIN/s: Spindle assembly checkpoint kinase (InterPro:IPR020663), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ataurora1 (TAIR:AT4G32830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35800 : 430.0) no description available & (gnl|cdd|29142 : 280.0) no description available & (q6x4a2|cipk1_orysa : 173.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1052.0) & (original description: Putative AUR1, Description = Serine/threonine-protein kinase Aurora-1, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf01349_326615-345535' '(at1g49180 : 318.0) protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, nucleic acid binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase, putative (InterPro:IPR020655), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G37840.1). & (gnl|cdd|35815 : 292.0) no description available & (gnl|cdd|29142 : 272.0) no description available & (p28582|cdpk_dauca : 148.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 636.0) & (original description: Putative ATG1c, Description = Serine/threonine-protein kinase, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf01450_129010-133883' '(q75lr7|sapk1_orysa : 518.0) Serine/threonine-protein kinase SAPK1 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 1) - Oryza sativa (Rice) & (at1g78290 : 500.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to karrikin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G33950.1); Has 112604 Blast hits to 110873 proteins in 3029 species: Archae - 114; Bacteria - 13128; Metazoa - 41421; Fungi - 12195; Plants - 25871; Viruses - 459; Other Eukaryotes - 19416 (source: NCBI BLink). & (gnl|cdd|35803 : 297.0) no description available & (gnl|cdd|47550 : 267.0) no description available & (reliability: 976.0) & (original description: Putative SAPK2, Description = Serine/threonine-protein kinase SAPK2, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf01450_129346-132387' '(q75lr7|sapk1_orysa : 347.0) Serine/threonine-protein kinase SAPK1 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 1) - Oryza sativa (Rice) & (at1g78290 : 325.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to karrikin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G33950.1); Has 112604 Blast hits to 110873 proteins in 3029 species: Archae - 114; Bacteria - 13128; Metazoa - 41421; Fungi - 12195; Plants - 25871; Viruses - 459; Other Eukaryotes - 19416 (source: NCBI BLink). & (gnl|cdd|35803 : 198.0) no description available & (gnl|cdd|47550 : 169.0) no description available & (reliability: 648.0) & (original description: Putative pk5, Description = Serine/threonine-protein kinase SAPK7, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf01552_223990-235429' '(at3g01090 : 667.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase; SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02723|rkin1_secce : 559.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (gnl|cdd|35808 : 349.0) no description available & (gnl|cdd|29142 : 304.0) no description available & (reliability: 1334.0) & (original description: Putative PKIN1, Description = SNF1-related protein kinase, PFAM = PF02149;PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf01574_464237-471660' '(at4g33950 : 629.0) Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network.; OPEN STOMATA 1 (OST1); FUNCTIONS IN: calcium-dependent protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 (TAIR:AT5G66880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q75h77|sapka_orysa : 614.0) Serine/threonine-protein kinase SAPK10 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 10) - Oryza sativa (Rice) & (gnl|cdd|35803 : 310.0) no description available & (gnl|cdd|29142 : 267.0) no description available & (reliability: 1258.0) & (original description: Putative SRK2E, Description = Serine/threonine-protein kinase SRK2E, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf01617_16412-22107' '(at5g50860 : 684.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: N-terminal protein myristoylation, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G54610.3); Has 127216 Blast hits to 125539 proteins in 4407 species: Archae - 96; Bacteria - 14251; Metazoa - 47558; Fungi - 13008; Plants - 31428; Viruses - 439; Other Eukaryotes - 20436 (source: NCBI BLink). & (gnl|cdd|35820 : 624.0) no description available & (gnl|cdd|29142 : 259.0) no description available & (q38772|cdc2a_antma : 214.0) Cell division control protein 2 homolog A (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (reliability: 1238.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf01683_703049-716055' '(gnl|cdd|35820 : 477.0) no description available & (at1g54610 : 426.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G05050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29142 : 254.0) no description available & (q38772|cdc2a_antma : 225.0) Cell division control protein 2 homolog A (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (reliability: 852.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf01683_703370-709958' '(at1g53050 : 189.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G09600.1); Has 124596 Blast hits to 123234 proteins in 4130 species: Archae - 92; Bacteria - 13981; Metazoa - 46101; Fungi - 12764; Plants - 31065; Viruses - 453; Other Eukaryotes - 20140 (source: NCBI BLink). & (gnl|cdd|35820 : 181.0) no description available & (gnl|cdd|29142 : 95.7) no description available & (q05006|cdc22_medsa : 85.1) Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Medicago sativa (Alfalfa) & (reliability: 362.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf02237_1089412-1094552' '(at3g48190 : 108.0) encodes a homolog of the human ATM gene, which is mutated in ataxia telangiectasia, a chromosome instability disorder. Characterization of mutants suggest a role in repairing DNA in response to ionizing radiation as well as during meiosis. The protein has kinase domains and shows kinase activity in orthologs. There is also evidence that ATM might be involved in the telomerase-independent process known as Alternative Lengthening of Telomeres.; ataxia-telangiectasia mutated (ATM); FUNCTIONS IN: 1-phosphatidylinositol-3-phosphate 5-kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), PIK-related kinase, FAT (InterPro:IPR003151), Ataxia-Telangiectasia Mutated (InterPro:IPR015519), PIK-related kinase (InterPro:IPR014009), PWWP (InterPro:IPR000313), PIK-related kinase, FATC (InterPro:IPR003152), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Ataxia telangiectasia-mutated and RAD3-related (TAIR:AT5G40820.1); Has 3479 Blast hits to 3364 proteins in 268 species: Archae - 0; Bacteria - 7; Metazoa - 1400; Fungi - 858; Plants - 531; Viruses - 0; Other Eukaryotes - 683 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative PGSC0003DMG400026995, Description = Serine/threonine-protein kinase ATM, PFAM = PF00855)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf02790_323369-335631' '(at4g29810 : 505.0) encodes a MAP kinase kinase 2 that regulates MPK6 and MPK4 in response to cold and salt stresses. Co-expression with MEKK1 in protoplasts activated MKK2 activity, suggesting that MEKK1 may be a regulator of MKK2.; MAP kinase kinase 2 (MKK2); FUNCTIONS IN: MAP kinase kinase activity, kinase activity; INVOLVED IN: cold acclimation, MAPKKK cascade, response to salt stress, response to cold, defense response, incompatible interaction; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: MAP kinase/ ERK kinase 1 (TAIR:AT4G26070.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35801 : 423.0) no description available & (q5qn75|m2k1_orysa : 416.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 256.0) no description available & (reliability: 1010.0) & (original description: Putative mek1, Description = MAP kinase kinase, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf02829_343332-358556' '(at1g54510 : 592.0) Encodes AtNEK1, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.; NIMA-related serine/threonine kinase 1 (NEK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NIMA-related kinase 2 (TAIR:AT3G04810.2). & (gnl|cdd|35809 : 400.0) no description available & (gnl|cdd|29142 : 252.0) no description available & (q5qn75|m2k1_orysa : 132.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1114.0) & (original description: Putative NEK3, Description = Serine/threonine-protein kinase Nek3, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf03080_270828-277108' '(at4g33950 : 535.0) Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network.; OPEN STOMATA 1 (OST1); FUNCTIONS IN: calcium-dependent protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 (TAIR:AT5G66880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q75v57|sapk9_orysa : 517.0) Serine/threonine-protein kinase SAPK9 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 9) - Oryza sativa (Rice) & (gnl|cdd|35803 : 267.0) no description available & (gnl|cdd|47550 : 231.0) no description available & (reliability: 1070.0) & (original description: Putative pk5, Description = Serine/threonine-protein kinase SAPK7, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf03241_21186-26219' '(at2g22560 : 584.0) Kinase interacting (KIP1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT5G10500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71206 : 126.0) no description available & (reliability: 1168.0) & (original description: Putative NET2A, Description = Protein NETWORKED 2A, PFAM = PF07765)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf03300_547227-553448' '(at4g33950 : 634.0) Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network.; OPEN STOMATA 1 (OST1); FUNCTIONS IN: calcium-dependent protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 (TAIR:AT5G66880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q75h77|sapka_orysa : 618.0) Serine/threonine-protein kinase SAPK10 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 10) - Oryza sativa (Rice) & (gnl|cdd|35803 : 311.0) no description available & (gnl|cdd|29142 : 271.0) no description available & (reliability: 1268.0) & (original description: Putative SRK2E, Description = Serine/threonine-protein kinase SRK2E, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf03535_35823-51185' '(at5g03420 : 176.0) 5'-AMP-activated protein kinase-related; BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase-related (TAIR:AT1G27070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative At5g03420, Description = Putative ovule protein, PFAM = PF16561)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf03844_95214-102591' '(at4g33950 : 584.0) Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network.; OPEN STOMATA 1 (OST1); FUNCTIONS IN: calcium-dependent protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 (TAIR:AT5G66880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q75h77|sapka_orysa : 577.0) Serine/threonine-protein kinase SAPK10 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 10) - Oryza sativa (Rice) & (gnl|cdd|35803 : 302.0) no description available & (gnl|cdd|29142 : 265.0) no description available & (reliability: 1168.0) & (original description: Putative pk5, Description = Serine/threonine-protein kinase SAPK7, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf03855_540787-546999' '(at1g54610 : 713.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G05050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35820 : 656.0) no description available & (gnl|cdd|29142 : 247.0) no description available & (q05006|cdc22_medsa : 220.0) Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Medicago sativa (Alfalfa) & (reliability: 1426.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf04396_218277-227482' '(at1g54610 : 726.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G05050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35820 : 656.0) no description available & (gnl|cdd|29142 : 250.0) no description available & (q38772|cdc2a_antma : 224.0) Cell division control protein 2 homolog A (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (reliability: 1452.0) & (original description: Putative crk1, Description = CRK1 protein, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf04633_102750-108226' '(at1g09840 : 131.0) shaggy-like protein kinase 41 (SK41); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: shaggy-like kinase 42 (TAIR:AT1G57870.2); Has 102931 Blast hits to 101896 proteins in 3684 species: Archae - 93; Bacteria - 10743; Metazoa - 37496; Fungi - 11700; Plants - 24573; Viruses - 362; Other Eukaryotes - 17964 (source: NCBI BLink). & (p51139|msk3_medsa : 130.0) Glycogen synthase kinase-3 homolog MsK-3 (EC 2.7.11.1) - Medicago sativa (Alfalfa) & (gnl|cdd|35877 : 114.0) no description available & (reliability: 260.0) & (original description: Putative shag, Description = Shaggy-related protein kinase theta, PFAM = )' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf04754_443171-446195' '(gnl|cdd|35804 : 357.0) no description available & (at3g18750 : 301.0) Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.; with no lysine (K) kinase 6 (WNK6); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G49160.2). & (gnl|cdd|29142 : 170.0) no description available & (reliability: 554.0) & (original description: Putative oipk, Description = WNK kinase, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf04950_125329-133370' '(at2g22560 : 574.0) Kinase interacting (KIP1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT5G10500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71206 : 125.0) no description available & (reliability: 1148.0) & (original description: Putative KIP1, Description = Kinase interacting family protein, putative, PFAM = PF07765)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf05203_391503-518284' '(at3g48190 : 3252.0) encodes a homolog of the human ATM gene, which is mutated in ataxia telangiectasia, a chromosome instability disorder. Characterization of mutants suggest a role in repairing DNA in response to ionizing radiation as well as during meiosis. The protein has kinase domains and shows kinase activity in orthologs. There is also evidence that ATM might be involved in the telomerase-independent process known as Alternative Lengthening of Telomeres.; ataxia-telangiectasia mutated (ATM); FUNCTIONS IN: 1-phosphatidylinositol-3-phosphate 5-kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), PIK-related kinase, FAT (InterPro:IPR003151), Ataxia-Telangiectasia Mutated (InterPro:IPR015519), PIK-related kinase (InterPro:IPR014009), PWWP (InterPro:IPR000313), PIK-related kinase, FATC (InterPro:IPR003152), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Ataxia telangiectasia-mutated and RAD3-related (TAIR:AT5G40820.1); Has 3479 Blast hits to 3364 proteins in 268 species: Archae - 0; Bacteria - 7; Metazoa - 1400; Fungi - 858; Plants - 531; Viruses - 0; Other Eukaryotes - 683 (source: NCBI BLink). & (gnl|cdd|36110 : 1060.0) no description available & (gnl|cdd|73241 : 340.0) no description available & (q5z987|atr_orysa : 245.0) Serine/threonine-protein kinase ATR (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 6504.0) & (original description: Putative ATM, Description = ATM protein, PFAM = PF00454;PF02260)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf05520_50828-58262' '(at1g04700 : 536.0) PB1 domain-containing protein tyrosine kinase; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT3G24715.1); Has 117644 Blast hits to 116217 proteins in 4946 species: Archae - 115; Bacteria - 12372; Metazoa - 45570; Fungi - 9947; Plants - 31841; Viruses - 450; Other Eukaryotes - 17349 (source: NCBI BLink). & (gnl|cdd|35413 : 303.0) no description available & (gnl|cdd|87344 : 242.0) no description available & (q8l4h4|nork_medtr : 98.6) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 972.0) & (original description: Putative STY2, Description = Serine/threonine-protein kinase CTR1, PFAM = PF00564;PF07714)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf05566_349924-357563' '(q75lr7|sapk1_orysa : 519.0) Serine/threonine-protein kinase SAPK1 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 1) - Oryza sativa (Rice) & (at1g78290 : 483.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to karrikin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G33950.1); Has 112604 Blast hits to 110873 proteins in 3029 species: Archae - 114; Bacteria - 13128; Metazoa - 41421; Fungi - 12195; Plants - 25871; Viruses - 459; Other Eukaryotes - 19416 (source: NCBI BLink). & (gnl|cdd|35803 : 309.0) no description available & (gnl|cdd|29142 : 280.0) no description available & (reliability: 964.0) & (original description: Putative SAPK1, Description = Serine/threonine-protein kinase SAPK1, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf05805_269528-277123' '(at2g17890 : 793.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 16 (CPK16); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 18 (TAIR:AT4G36070.1); Has 126765 Blast hits to 124478 proteins in 3942 species: Archae - 195; Bacteria - 14619; Metazoa - 47448; Fungi - 14527; Plants - 27603; Viruses - 509; Other Eukaryotes - 21864 (source: NCBI BLink). & (p53681|crk_dauca : 431.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 370.0) no description available & (gnl|cdd|47550 : 272.0) no description available & (reliability: 1572.0) & (original description: Putative CPK16, Description = Calcium-dependent protein kinase 16, PFAM = PF00069;PF13499;PF13202)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf05928_45031-49598' '(at3g01090 : 179.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase; SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02723|rkin1_secce : 148.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (reliability: 358.0) & (original description: Putative snrk1, Description = SNF1-related protein kinase, PFAM = PF02149)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf06026_16716-24330' '(at3g01090 : 652.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase; SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02723|rkin1_secce : 466.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (gnl|cdd|35803 : 314.0) no description available & (gnl|cdd|29142 : 273.0) no description available & (reliability: 1304.0) & (original description: Putative KIN10, Description = SNF1-related protein kinase catalytic subunit alpha KIN10, PFAM = PF00069;PF02149)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf06442_38494-44506' '(q40518|msk1_tobac : 174.0) Shaggy-related protein kinase NtK-1 (EC 2.7.11.1) - Nicotiana tabacum (Common tobacco) & (at3g05840 : 173.0) encodes a SHAGGY-like kinase involved in meristem organization.; ATSK12; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: meristem structural organization, gynoecium development, phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: shaggy-related kinase 11 (TAIR:AT5G26751.1); Has 106116 Blast hits to 104748 proteins in 3681 species: Archae - 81; Bacteria - 10864; Metazoa - 38225; Fungi - 11828; Plants - 26475; Viruses - 386; Other Eukaryotes - 18257 (source: NCBI BLink). & (gnl|cdd|35877 : 136.0) no description available & (reliability: 328.0) & (original description: Putative gsk3, Description = Shaggy-related protein kinase theta, PFAM = )' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf06698_51235-55850' '(at4g32830 : 521.0) Encodes a member of a family of Ser/Thr kinases whose activities peak during cell division. Transcripts are abundant in tissues rich in dividing cells like roots and flowers but are low or absent in fully expanded leaves and stems. In interphase cells, the protein is predominantly nuclear. During mitosis, the protein associates with plant-specific cytoskeletal structures (preprophase band, phragmoplast, nascent cell plate) that are necessary for cytokinesis as well as with the microtubule spindle. It specifically phosphorylates Ser10 of histone H3 and colocalizes with phosphorylated histone H3 during mitosis.; ataurora1 (AUR1); CONTAINS InterPro DOMAIN/s: Spindle assembly checkpoint kinase (InterPro:IPR020663), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ataurora2 (TAIR:AT2G25880.1); Has 130781 Blast hits to 128539 proteins in 4385 species: Archae - 169; Bacteria - 15091; Metazoa - 48154; Fungi - 12951; Plants - 32302; Viruses - 558; Other Eukaryotes - 21556 (source: NCBI BLink). & (gnl|cdd|35800 : 415.0) no description available & (gnl|cdd|29142 : 276.0) no description available & (q6x4a2|cipk1_orysa : 176.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1034.0) & (original description: Putative AUR1, Description = Serine/threonine-protein kinase Aurora-1, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf06956_18663-79764' '(at4g13020 : 506.0) Encodes a member of the cdc2+ family of protein kinases MHK. Similar to the mak genes of rats. mak encodes a protein kinase that may play a role in spermatogenesis.; MHK; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G19110.2). & (gnl|cdd|35880 : 444.0) no description available & (gnl|cdd|29142 : 260.0) no description available & (q53n72|mpk15_orysa : 197.0) Mitogen-activated protein kinase 15 (EC 2.7.11.24) (MAP kinase 15) - Oryza sativa (Rice) & (reliability: 1012.0) & (original description: Putative crk2, Description = Putative Cdc2-related protein kinase CRK2, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf06956_21326-27272' '(at4g13020 : 418.0) Encodes a member of the cdc2+ family of protein kinases MHK. Similar to the mak genes of rats. mak encodes a protein kinase that may play a role in spermatogenesis.; MHK; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G19110.2). & (gnl|cdd|35880 : 375.0) no description available & (gnl|cdd|29142 : 252.0) no description available & (q53n72|mpk15_orysa : 169.0) Mitogen-activated protein kinase 15 (EC 2.7.11.24) (MAP kinase 15) - Oryza sativa (Rice) & (reliability: 836.0) & (original description: Putative crk2, Description = Serine/threonine-protein kinase MAK, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf07019_100008-106677' '(at2g17890 : 769.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 16 (CPK16); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 18 (TAIR:AT4G36070.1); Has 126765 Blast hits to 124478 proteins in 3942 species: Archae - 195; Bacteria - 14619; Metazoa - 47448; Fungi - 14527; Plants - 27603; Viruses - 509; Other Eukaryotes - 21864 (source: NCBI BLink). & (p53681|crk_dauca : 442.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 370.0) no description available & (gnl|cdd|47550 : 263.0) no description available & (reliability: 1534.0) & (original description: Putative CPK16, Description = Calcium-dependent protein kinase 16, PFAM = PF00069;PF13833;PF13202)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf07424_223429-241622' '(gnl|cdd|35820 : 302.0) no description available & (at1g54610 : 267.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G05050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29142 : 161.0) no description available & (q38772|cdc2a_antma : 158.0) Cell division control protein 2 homolog A (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (reliability: 534.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf07428_183901-210526' '(at4g13020 : 566.0) Encodes a member of the cdc2+ family of protein kinases MHK. Similar to the mak genes of rats. mak encodes a protein kinase that may play a role in spermatogenesis.; MHK; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G19110.2). & (gnl|cdd|35880 : 445.0) no description available & (gnl|cdd|29142 : 265.0) no description available & (p23111|cdc2_maize : 194.0) Cell division control protein 2 homolog (EC 2.7.11.22) (EC 2.7.11.23) (p34cdc2) - Zea mays (Maize) & (reliability: 1132.0) & (original description: Putative crk2, Description = Putative Cdc2-related protein kinase CRK2, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf07511_243328-249661' '(at2g22560 : 526.0) Kinase interacting (KIP1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT5G10500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71206 : 121.0) no description available & (reliability: 1052.0) & (original description: Putative KIP1, Description = Kinase-interacting protein 1, PFAM = PF07765)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf07631_13234-18240' '(gnl|cdd|35820 : 486.0) no description available & (at1g54610 : 434.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G05050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29142 : 265.0) no description available & (q38772|cdc2a_antma : 221.0) Cell division control protein 2 homolog A (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (reliability: 868.0) & (original description: Putative crk1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf08228_401296-408800' '(at1g04700 : 520.0) PB1 domain-containing protein tyrosine kinase; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT3G24715.1); Has 117644 Blast hits to 116217 proteins in 4946 species: Archae - 115; Bacteria - 12372; Metazoa - 45570; Fungi - 9947; Plants - 31841; Viruses - 450; Other Eukaryotes - 17349 (source: NCBI BLink). & (gnl|cdd|35413 : 301.0) no description available & (gnl|cdd|87344 : 242.0) no description available & (q8lpb4|pskr_dauca : 97.1) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 958.0) & (original description: Putative STY2, Description = Serine/threonine-protein kinase CTR1, PFAM = PF00564;PF07714)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf08357_512110-520828' '(at3g01090 : 857.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase; SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02723|rkin1_secce : 658.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (gnl|cdd|35808 : 368.0) no description available & (gnl|cdd|29142 : 310.0) no description available & (reliability: 1714.0) & (original description: Putative KIN10, Description = SNF1-related protein kinase catalytic subunit alpha KIN10, PFAM = PF00627;PF00069;PF02149)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf09345_90762-98849' '(at2g17890 : 833.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 16 (CPK16); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 18 (TAIR:AT4G36070.1); Has 126765 Blast hits to 124478 proteins in 3942 species: Archae - 195; Bacteria - 14619; Metazoa - 47448; Fungi - 14527; Plants - 27603; Viruses - 509; Other Eukaryotes - 21864 (source: NCBI BLink). & (p53681|crk_dauca : 446.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 371.0) no description available & (gnl|cdd|29142 : 263.0) no description available & (reliability: 1662.0) & (original description: Putative CPK16, Description = Calcium-dependent protein kinase 16, PFAM = PF00069;PF13499;PF13499)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf09552_10577-21583' '(at1g09840 : 688.0) shaggy-like protein kinase 41 (SK41); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: shaggy-like kinase 42 (TAIR:AT1G57870.2); Has 102931 Blast hits to 101896 proteins in 3684 species: Archae - 93; Bacteria - 10743; Metazoa - 37496; Fungi - 11700; Plants - 24573; Viruses - 362; Other Eukaryotes - 17964 (source: NCBI BLink). & (p51139|msk3_medsa : 604.0) Glycogen synthase kinase-3 homolog MsK-3 (EC 2.7.11.1) - Medicago sativa (Alfalfa) & (gnl|cdd|35877 : 579.0) no description available & (gnl|cdd|29142 : 230.0) no description available & (reliability: 1364.0) & (original description: Putative ASK10, Description = Shaggy-related protein kinase kappa, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf10103_398947-404592' '(at4g29810 : 517.0) encodes a MAP kinase kinase 2 that regulates MPK6 and MPK4 in response to cold and salt stresses. Co-expression with MEKK1 in protoplasts activated MKK2 activity, suggesting that MEKK1 may be a regulator of MKK2.; MAP kinase kinase 2 (MKK2); FUNCTIONS IN: MAP kinase kinase activity, kinase activity; INVOLVED IN: cold acclimation, MAPKKK cascade, response to salt stress, response to cold, defense response, incompatible interaction; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: MAP kinase/ ERK kinase 1 (TAIR:AT4G26070.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 460.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (gnl|cdd|35801 : 432.0) no description available & (gnl|cdd|47550 : 262.0) no description available & (reliability: 1034.0) & (original description: Putative mek1, Description = MAP kinase kinase, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf10278_34750-45155' '(q75lr7|sapk1_orysa : 466.0) Serine/threonine-protein kinase SAPK1 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 1) - Oryza sativa (Rice) & (at1g78290 : 429.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to karrikin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G33950.1); Has 112604 Blast hits to 110873 proteins in 3029 species: Archae - 114; Bacteria - 13128; Metazoa - 41421; Fungi - 12195; Plants - 25871; Viruses - 459; Other Eukaryotes - 19416 (source: NCBI BLink). & (gnl|cdd|35803 : 267.0) no description available & (gnl|cdd|47550 : 231.0) no description available & (reliability: 858.0) & (original description: Putative OST1, Description = Calcium-independent ABA-activated protein kinase, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf10278_34777-44745' '(q75lr7|sapk1_orysa : 523.0) Serine/threonine-protein kinase SAPK1 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 1) - Oryza sativa (Rice) & (at1g78290 : 500.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to karrikin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G33950.1); Has 112604 Blast hits to 110873 proteins in 3029 species: Archae - 114; Bacteria - 13128; Metazoa - 41421; Fungi - 12195; Plants - 25871; Viruses - 459; Other Eukaryotes - 19416 (source: NCBI BLink). & (gnl|cdd|35803 : 298.0) no description available & (gnl|cdd|29142 : 262.0) no description available & (reliability: 976.0) & (original description: Putative SAPK2, Description = Serine/threonine-protein kinase SAPK2, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf10438_365454-370632' '(q84tc6|sapk2_orysa : 529.0) Serine/threonine-protein kinase SAPK2 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 2) - Oryza sativa (Rice) & (at1g78290 : 501.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to karrikin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G33950.1); Has 112604 Blast hits to 110873 proteins in 3029 species: Archae - 114; Bacteria - 13128; Metazoa - 41421; Fungi - 12195; Plants - 25871; Viruses - 459; Other Eukaryotes - 19416 (source: NCBI BLink). & (gnl|cdd|35803 : 304.0) no description available & (gnl|cdd|47550 : 269.0) no description available & (reliability: 1000.0) & (original description: Putative pk5, Description = Serine/threonine-protein kinase SAPK7, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf15496_166960-173095' '(q75v63|sapk3_orysa : 530.0) Serine/threonine-protein kinase SAPK3 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 3) (Protein kinase REK) - Oryza sativa (Rice) & (at4g33950 : 503.0) Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network.; OPEN STOMATA 1 (OST1); FUNCTIONS IN: calcium-dependent protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 (TAIR:AT5G66880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35803 : 309.0) no description available & (gnl|cdd|47550 : 274.0) no description available & (reliability: 1006.0) & (original description: Putative SAPK3, Description = Serine/threonine-protein kinase SAPK3, PFAM = PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf17051_26903-39840' '(at3g01090 : 825.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase; SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02723|rkin1_secce : 635.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (gnl|cdd|35808 : 367.0) no description available & (gnl|cdd|29142 : 310.0) no description available & (reliability: 1650.0) & (original description: Putative SNF1, Description = SNF1, PFAM = PF00627;PF00069)' T '29.4.1' 'protein.postranslational modification.kinase' 'niben101scf18551_54903-60119' '(q84tc6|sapk2_orysa : 535.0) Serine/threonine-protein kinase SAPK2 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 2) - Oryza sativa (Rice) & (at4g33950 : 506.0) Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network.; OPEN STOMATA 1 (OST1); FUNCTIONS IN: calcium-dependent protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 (TAIR:AT5G66880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35803 : 301.0) no description available & (gnl|cdd|47550 : 267.0) no description available & (reliability: 1012.0) & (original description: Putative SAPK2, Description = Serine/threonine-protein kinase SAPK2, PFAM = PF00069)' T '29.4.1.51' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase I' 'niben101scf00133_633087-639578' '(at3g56050 : 417.0) Protein kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT2G40270.1); Has 41170 Blast hits to 40839 proteins in 1653 species: Archae - 20; Bacteria - 2328; Metazoa - 11695; Fungi - 793; Plants - 23080; Viruses - 152; Other Eukaryotes - 3102 (source: NCBI BLink). & (gnl|cdd|36401 : 225.0) no description available & (q8lkz1|nork_pea : 130.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 121.0) no description available & (reliability: 834.0) & (original description: Putative MDIS2, Description = Protein MALE DISCOVERER 2, PFAM = PF08263;PF07714;PF07714)' T '29.4.1.51' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase I' 'niben101scf02169_67739-74438' '(at2g40270 : 436.0) Protein kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT3G56050.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 228.0) no description available & (q8l4h4|nork_medtr : 134.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 122.0) no description available & (reliability: 872.0) & (original description: Putative stkP, Description = Ser-Thr protein kinase, PFAM = PF13855;PF07714;PF07714;PF08263)' T '29.4.1.52' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase II' 'nbv0.3scaffold2625_10257-17120' '(at4g35230 : 840.0) Encodes BR-signaling kinase 1 (BSK1), one of the three homologous BR-signaling kinases (BSK1, AT4G35230; BSK2, AT5G46570; BSK3, AT4G00710). Mediates signal transduction from receptor kinase BRI1 by functioning as the substrate of BRI1. Plasma membrane localized.; BR-signaling kinase 1 (BSK1); FUNCTIONS IN: binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: brassinosteroid mediated signaling pathway, N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G59010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 213.0) no description available & (p17801|kpro_maize : 119.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 108.0) no description available & (reliability: 1680.0) & (original description: Putative At4g35230, Description = Probable serine/threonine-protein kinase At4g35230, PFAM = PF07714)' T '29.4.1.52' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase II' 'nbv0.3scaffold11781_37381-43029' '(at5g59010 : 730.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT3G54030.1); Has 21140 Blast hits to 20932 proteins in 637 species: Archae - 6; Bacteria - 562; Metazoa - 1681; Fungi - 205; Plants - 18085; Viruses - 31; Other Eukaryotes - 570 (source: NCBI BLink). & (gnl|cdd|36401 : 196.0) no description available & (gnl|cdd|47549 : 111.0) no description available & (o24585|cri4_maize : 105.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 1460.0) & (original description: Putative At5g41260, Description = Probable serine/threonine-protein kinase At5g41260, PFAM = PF07714)' T '29.4.1.52' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase II' 'nbv0.3scaffold35150_3068-7674' '(at1g63500 : 565.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G41260.1); Has 34543 Blast hits to 34010 proteins in 1386 species: Archae - 8; Bacteria - 2627; Metazoa - 7585; Fungi - 183; Plants - 22470; Viruses - 98; Other Eukaryotes - 1572 (source: NCBI BLink). & (gnl|cdd|36401 : 112.0) no description available & (reliability: 1074.0) & (original description: Putative BSK2, Description = Putative serine/threonine-protein kinase, PFAM = PF07714)' T '29.4.1.52' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase II' 'nbv0.3scaffold35150_7675-10383' '(at1g63500 : 142.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G41260.1); Has 34543 Blast hits to 34010 proteins in 1386 species: Archae - 8; Bacteria - 2627; Metazoa - 7585; Fungi - 183; Plants - 22470; Viruses - 98; Other Eukaryotes - 1572 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative BSK2, Description = Kinase family protein, PFAM = )' T '29.4.1.52' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase II' 'nbv0.5scaffold462_210305-219874' '(at1g63500 : 807.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G41260.1); Has 34543 Blast hits to 34010 proteins in 1386 species: Archae - 8; Bacteria - 2627; Metazoa - 7585; Fungi - 183; Plants - 22470; Viruses - 98; Other Eukaryotes - 1572 (source: NCBI BLink). & (gnl|cdd|36401 : 200.0) no description available & (o24585|cri4_maize : 104.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|88314 : 104.0) no description available & (reliability: 1480.0) & (original description: Putative At5g41260, Description = Probable serine/threonine-protein kinase At5g41260, PFAM = PF07714)' T '29.4.1.52' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase II' 'niben044scf00025065ctg004_6700-14015' '(at1g63500 : 744.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G41260.1); Has 34543 Blast hits to 34010 proteins in 1386 species: Archae - 8; Bacteria - 2627; Metazoa - 7585; Fungi - 183; Plants - 22470; Viruses - 98; Other Eukaryotes - 1572 (source: NCBI BLink). & (gnl|cdd|36401 : 190.0) no description available & (o24585|cri4_maize : 98.2) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 97.2) no description available & (reliability: 1400.0) & (original description: Putative At5g41260, Description = Probable serine/threonine-protein kinase At5g41260, PFAM = PF07714)' T '29.4.1.52' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase II' 'niben044scf00026134ctg000_26221-37612' '(at4g35230 : 847.0) Encodes BR-signaling kinase 1 (BSK1), one of the three homologous BR-signaling kinases (BSK1, AT4G35230; BSK2, AT5G46570; BSK3, AT4G00710). Mediates signal transduction from receptor kinase BRI1 by functioning as the substrate of BRI1. Plasma membrane localized.; BR-signaling kinase 1 (BSK1); FUNCTIONS IN: binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: brassinosteroid mediated signaling pathway, N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G59010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 216.0) no description available & (o24585|cri4_maize : 118.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 105.0) no description available & (reliability: 1694.0) & (original description: Putative At4g35230, Description = Probable serine/threonine-protein kinase At4g35230, PFAM = PF07714)' T '29.4.1.52' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase II' 'niben044scf00034642ctg000_1-5536' '(at5g59010 : 821.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT3G54030.1); Has 21140 Blast hits to 20932 proteins in 637 species: Archae - 6; Bacteria - 562; Metazoa - 1681; Fungi - 205; Plants - 18085; Viruses - 31; Other Eukaryotes - 570 (source: NCBI BLink). & (gnl|cdd|36401 : 202.0) no description available & (o24585|cri4_maize : 114.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 108.0) no description available & (reliability: 1642.0) & (original description: Putative At5g41260, Description = Probable serine/threonine-protein kinase At5g41260, PFAM = PF07714)' T '29.4.1.52' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase II' 'niben044scf00049083ctg000_1033-5597' '(at1g63500 : 533.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G41260.1); Has 34543 Blast hits to 34010 proteins in 1386 species: Archae - 8; Bacteria - 2627; Metazoa - 7585; Fungi - 183; Plants - 22470; Viruses - 98; Other Eukaryotes - 1572 (source: NCBI BLink). & (gnl|cdd|36401 : 204.0) no description available & (o24585|cri4_maize : 106.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 106.0) no description available & (reliability: 1018.0) & (original description: Putative BnaA03g43510D, Description = BnaA03g43510D protein, PFAM = PF07714)' T '29.4.1.52' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase II' 'niben101scf02175_287045-299237' '(at4g35230 : 850.0) Encodes BR-signaling kinase 1 (BSK1), one of the three homologous BR-signaling kinases (BSK1, AT4G35230; BSK2, AT5G46570; BSK3, AT4G00710). Mediates signal transduction from receptor kinase BRI1 by functioning as the substrate of BRI1. Plasma membrane localized.; BR-signaling kinase 1 (BSK1); FUNCTIONS IN: binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: brassinosteroid mediated signaling pathway, N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G59010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 214.0) no description available & (o24585|cri4_maize : 119.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 105.0) no description available & (reliability: 1700.0) & (original description: Putative At4g35230, Description = Probable serine/threonine-protein kinase At4g35230, PFAM = PF07714)' T '29.4.1.52' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase II' 'niben101scf03949_58397-73262' '(at4g35230 : 828.0) Encodes BR-signaling kinase 1 (BSK1), one of the three homologous BR-signaling kinases (BSK1, AT4G35230; BSK2, AT5G46570; BSK3, AT4G00710). Mediates signal transduction from receptor kinase BRI1 by functioning as the substrate of BRI1. Plasma membrane localized.; BR-signaling kinase 1 (BSK1); FUNCTIONS IN: binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: brassinosteroid mediated signaling pathway, N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G59010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 206.0) no description available & (p17801|kpro_maize : 114.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 98.8) no description available & (reliability: 1656.0) & (original description: Putative At4g35230, Description = Probable serine/threonine-protein kinase At4g35230, PFAM = PF00069)' T '29.4.1.52' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase II' 'niben101scf04368_56475-62053' '(at5g59010 : 821.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT3G54030.1); Has 21140 Blast hits to 20932 proteins in 637 species: Archae - 6; Bacteria - 562; Metazoa - 1681; Fungi - 205; Plants - 18085; Viruses - 31; Other Eukaryotes - 570 (source: NCBI BLink). & (gnl|cdd|36401 : 200.0) no description available & (o24585|cri4_maize : 114.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 106.0) no description available & (reliability: 1642.0) & (original description: Putative At5g41260, Description = Probable serine/threonine-protein kinase At5g41260, PFAM = PF07714)' T '29.4.1.52' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase II' 'niben101scf04732_161388-262404' '(at1g63500 : 692.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G41260.1); Has 34543 Blast hits to 34010 proteins in 1386 species: Archae - 8; Bacteria - 2627; Metazoa - 7585; Fungi - 183; Plants - 22470; Viruses - 98; Other Eukaryotes - 1572 (source: NCBI BLink). & (gnl|cdd|36401 : 189.0) no description available & (gnl|cdd|47549 : 94.1) no description available & (o24585|cri4_maize : 92.8) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 1320.0) & (original description: Putative BSK2, Description = Kinase family protein, PFAM = PF07714)' T '29.4.1.52' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase II' 'niben101scf04732_249930-254569' '(at1g63500 : 167.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G41260.1); Has 34543 Blast hits to 34010 proteins in 1386 species: Archae - 8; Bacteria - 2627; Metazoa - 7585; Fungi - 183; Plants - 22470; Viruses - 98; Other Eukaryotes - 1572 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative BSK2, Description = Putative serine/threonine-protein kinase, PFAM = )' T '29.4.1.52' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase II' 'niben101scf05201_777197-787145' '(at1g63500 : 810.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G41260.1); Has 34543 Blast hits to 34010 proteins in 1386 species: Archae - 8; Bacteria - 2627; Metazoa - 7585; Fungi - 183; Plants - 22470; Viruses - 98; Other Eukaryotes - 1572 (source: NCBI BLink). & (gnl|cdd|36401 : 200.0) no description available & (o24585|cri4_maize : 104.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|88314 : 104.0) no description available & (reliability: 1480.0) & (original description: Putative At5g41260, Description = Probable serine/threonine-protein kinase At5g41260, PFAM = PF07714)' T '29.4.1.52' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase II' 'niben101scf07672_80402-86305' '(at5g59010 : 684.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT3G54030.1); Has 21140 Blast hits to 20932 proteins in 637 species: Archae - 6; Bacteria - 562; Metazoa - 1681; Fungi - 205; Plants - 18085; Viruses - 31; Other Eukaryotes - 570 (source: NCBI BLink). & (gnl|cdd|36401 : 177.0) no description available & (gnl|cdd|47549 : 95.2) no description available & (o24585|cri4_maize : 88.6) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 1368.0) & (original description: Putative BSK2, Description = Putative serine/threonine-protein kinase, PFAM = PF07714)' T '29.4.1.52' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase II' 'niben101scf08430_41080-53774' '(at1g63500 : 567.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G41260.1); Has 34543 Blast hits to 34010 proteins in 1386 species: Archae - 8; Bacteria - 2627; Metazoa - 7585; Fungi - 183; Plants - 22470; Viruses - 98; Other Eukaryotes - 1572 (source: NCBI BLink). & (gnl|cdd|36401 : 112.0) no description available & (reliability: 1072.0) & (original description: Putative BnaCnng45960D, Description = BnaCnng45960D protein, PFAM = PF07714)' T '29.4.1.52' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase II' 'niben101scf10488_35464-42562' '(at5g59010 : 775.0) Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT3G54030.1); Has 21140 Blast hits to 20932 proteins in 637 species: Archae - 6; Bacteria - 562; Metazoa - 1681; Fungi - 205; Plants - 18085; Viruses - 31; Other Eukaryotes - 570 (source: NCBI BLink). & (gnl|cdd|36401 : 199.0) no description available & (o24585|cri4_maize : 109.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 105.0) no description available & (reliability: 1550.0) & (original description: Putative At5g41260, Description = Probable serine/threonine-protein kinase At5g41260, PFAM = PF07714)' T '29.4.1.53' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase III' 'nbv0.3scaffold58663_1-1598' '(at3g57740 : 103.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G57750.2); Has 31135 Blast hits to 30839 proteins in 1583 species: Archae - 4; Bacteria - 2835; Metazoa - 4267; Fungi - 840; Plants - 21255; Viruses - 28; Other Eukaryotes - 1906 (source: NCBI BLink). & (gnl|cdd|36401 : 88.2) no description available & (reliability: 195.6) & (original description: Putative PGSC0003DMG400011871, Description = Putative inactive serine/threonine-protein kinase-like, PFAM = PF07714)' T '29.4.1.53' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase III' 'niben101scf13995_142100-145328' '(gnl|cdd|36401 : 226.0) no description available & (at3g57750 : 221.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G57710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8lkz1|nork_pea : 106.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|84488 : 82.2) no description available & (reliability: 404.0) & (original description: Putative ZED1, Description = Non-functional pseudokinase ZED1, PFAM = PF00069)' T '29.4.1.54' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IV' 'nbv0.5scaffold4769_148997-161968' '(at2g11520 : 536.0) high overall homology to CRCK1; calmodulin-binding receptor-like cytoplasmic kinase 3 (CRCK3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calmodulin-binding receptor-like cytoplasmic kinase 1 (TAIR:AT5G58940.1); Has 123901 Blast hits to 122321 proteins in 5054 species: Archae - 113; Bacteria - 14763; Metazoa - 45926; Fungi - 10619; Plants - 33482; Viruses - 501; Other Eukaryotes - 18497 (source: NCBI BLink). & (gnl|cdd|36401 : 335.0) no description available & (q8l4h4|nork_medtr : 230.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 181.0) no description available & (reliability: 1072.0) & (original description: Putative CRCK3, Description = Calmodulin-binding receptor-like cytoplasmic kinase 3, PFAM = PF07714)' T '29.4.1.54' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IV' 'niben101scf00177_911277-919523' '(gnl|cdd|36401 : 267.0) no description available & (at5g40380 : 194.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (CRK42); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (TAIR:AT1G70530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29142 : 172.0) no description available & (o24585|cri4_maize : 158.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 350.0) & (original description: Putative Sb08g000610, Description = Putative uncharacterized protein Sb08g000610, PFAM = PF00069)' T '29.4.1.54' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IV' 'niben101scf03216_21554-28566' '(at4g00330 : 462.0) high overall homology to CRCK1; calmodulin-binding receptor-like cytoplasmic kinase 2 (CRCK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: pollen development; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calmodulin-binding receptor-like cytoplasmic kinase 1 (TAIR:AT5G58940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 319.0) no description available & (q8l4h4|nork_medtr : 208.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 179.0) no description available & (reliability: 924.0) & (original description: Putative CRCK2, Description = Calmodulin-binding receptor-like cytoplasmic kinase 2, PFAM = PF07714)' T '29.4.1.55' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V' 'nbv0.3scaffold352_126087-131728' '(gnl|cdd|36401 : 167.0) no description available & (at1g24030 : 117.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 120365 Blast hits to 119013 proteins in 4490 species: Archae - 114; Bacteria - 14164; Metazoa - 43937; Fungi - 10244; Plants - 33641; Viruses - 447; Other Eukaryotes - 17818 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 103.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 86.0) no description available & (reliability: 222.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF07714;PF00069)' T '29.4.1.55' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V' 'nbv0.3scaffold6334_36102-54048' '(at4g02630 : 599.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G01540.2); Has 118173 Blast hits to 116837 proteins in 4543 species: Archae - 107; Bacteria - 14277; Metazoa - 44024; Fungi - 9538; Plants - 32682; Viruses - 411; Other Eukaryotes - 17134 (source: NCBI BLink). & (gnl|cdd|36401 : 387.0) no description available & (q8lpb4|pskr_dauca : 234.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 164.0) no description available & (reliability: 1172.0) & (original description: Putative At1g01540, Description = Probable serine/threonine-protein kinase At1g01540, PFAM = PF00069;PF00010)' T '29.4.1.55' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V' 'nbv0.3scaffold38063_5045-12083' '(at4g34500 : 541.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G01540.2); Has 115678 Blast hits to 114509 proteins in 4424 species: Archae - 123; Bacteria - 13963; Metazoa - 42848; Fungi - 9665; Plants - 32029; Viruses - 413; Other Eukaryotes - 16637 (source: NCBI BLink). & (gnl|cdd|36401 : 390.0) no description available & (q8lpb4|pskr_dauca : 259.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 167.0) no description available & (reliability: 1082.0) & (original description: Putative At4g34500, Description = Probable receptor-like serine/threonine-protein kinase At4g34500, PFAM = PF00069)' T '29.4.1.55' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V' 'nbv0.5scaffold3011_174745-181077' '(at1g56720 : 655.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G09440.1); Has 120691 Blast hits to 119279 proteins in 4439 species: Archae - 109; Bacteria - 14558; Metazoa - 44074; Fungi - 10018; Plants - 33595; Viruses - 426; Other Eukaryotes - 17911 (source: NCBI BLink). & (gnl|cdd|36401 : 399.0) no description available & (q8lpb4|pskr_dauca : 256.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 174.0) no description available & (reliability: 1310.0) & (original description: Putative At5g18500, Description = Probable receptor-like protein kinase At5g18500, PFAM = PF00069)' T '29.4.1.55' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V' 'nbv0.5scaffold3011_178310-180981' '(at1g56720 : 108.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G09440.1); Has 120691 Blast hits to 119279 proteins in 4439 species: Archae - 109; Bacteria - 14558; Metazoa - 44074; Fungi - 10018; Plants - 33595; Viruses - 426; Other Eukaryotes - 17911 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative umc1504, Description = Putative receptor-like protein kinase, PFAM = )' T '29.4.1.55' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V' 'niben044scf00005698ctg028_1888-7707' '(gnl|cdd|36401 : 167.0) no description available & (at1g24030 : 117.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 120365 Blast hits to 119013 proteins in 4490 species: Archae - 114; Bacteria - 14164; Metazoa - 43937; Fungi - 10244; Plants - 33641; Viruses - 447; Other Eukaryotes - 17818 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 105.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47550 : 87.6) no description available & (reliability: 228.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF07714;PF00069)' T '29.4.1.55' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V' 'niben044scf00010856ctg005_1-5486' '(at1g01540 : 171.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G01330.1); Has 118949 Blast hits to 117566 proteins in 4483 species: Archae - 118; Bacteria - 14365; Metazoa - 43793; Fungi - 9783; Plants - 32976; Viruses - 455; Other Eukaryotes - 17459 (source: NCBI BLink). & (gnl|cdd|36401 : 154.0) no description available & (q8lpb4|pskr_dauca : 102.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 91.0) no description available & (reliability: 342.0) & (original description: Putative umc1285, Description = Putative serine/threonine-protein kinase, PFAM = PF07714)' T '29.4.1.55' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V' 'niben044scf00025441ctg004_1-4934' '(at1g01540 : 540.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G01330.1); Has 118949 Blast hits to 117566 proteins in 4483 species: Archae - 118; Bacteria - 14365; Metazoa - 43793; Fungi - 9783; Plants - 32976; Viruses - 455; Other Eukaryotes - 17459 (source: NCBI BLink). & (gnl|cdd|36401 : 385.0) no description available & (q8lpb4|pskr_dauca : 240.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 161.0) no description available & (reliability: 1080.0) & (original description: Putative Sb06g016790, Description = Putative uncharacterized protein Sb06g016790, PFAM = PF00069)' T '29.4.1.55' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V' 'niben044scf00039176ctg001_8625-15760' '(at4g34500 : 549.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G01540.2); Has 115678 Blast hits to 114509 proteins in 4424 species: Archae - 123; Bacteria - 13963; Metazoa - 42848; Fungi - 9665; Plants - 32029; Viruses - 413; Other Eukaryotes - 16637 (source: NCBI BLink). & (gnl|cdd|36401 : 400.0) no description available & (q8lpb4|pskr_dauca : 259.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 168.0) no description available & (reliability: 1098.0) & (original description: Putative At4g34500, Description = Probable receptor-like serine/threonine-protein kinase At4g34500, PFAM = PF00069)' T '29.4.1.55' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V' 'niben044scf00058842ctg000_16102-18266' '(at4g01330 : 88.6) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G01540.2). & (reliability: 161.8) & (original description: Putative)' T '29.4.1.55' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V' 'niben101scf00177_911277-919523' '(gnl|cdd|36401 : 267.0) no description available & (at5g40380 : 194.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (CRK42); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (TAIR:AT1G70530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29142 : 172.0) no description available & (o24585|cri4_maize : 158.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 364.0) & (original description: Putative Sb08g000610, Description = Putative uncharacterized protein Sb08g000610, PFAM = PF00069)' T '29.4.1.55' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V' 'niben101scf00402_232989-239155' '(at1g56720 : 639.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G09440.1); Has 120691 Blast hits to 119279 proteins in 4439 species: Archae - 109; Bacteria - 14558; Metazoa - 44074; Fungi - 10018; Plants - 33595; Viruses - 426; Other Eukaryotes - 17911 (source: NCBI BLink). & (gnl|cdd|36401 : 401.0) no description available & (q8lpb4|pskr_dauca : 254.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 176.0) no description available & (reliability: 1278.0) & (original description: Putative At5g18500, Description = Probable receptor-like protein kinase At5g18500, PFAM = PF00069)' T '29.4.1.55' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V' 'niben101scf00402_233091-235537' '(at1g56720 : 116.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G09440.1); Has 120691 Blast hits to 119279 proteins in 4439 species: Archae - 109; Bacteria - 14558; Metazoa - 44074; Fungi - 10018; Plants - 33595; Viruses - 426; Other Eukaryotes - 17911 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative umc1504, Description = Putative receptor-like protein kinase, PFAM = )' T '29.4.1.55' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V' 'niben101scf01236_226956-232042' '(at1g56720 : 592.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G09440.1); Has 120691 Blast hits to 119279 proteins in 4439 species: Archae - 109; Bacteria - 14558; Metazoa - 44074; Fungi - 10018; Plants - 33595; Viruses - 426; Other Eukaryotes - 17911 (source: NCBI BLink). & (gnl|cdd|36401 : 395.0) no description available & (q8lpb4|pskr_dauca : 256.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 172.0) no description available & (reliability: 1184.0) & (original description: Putative At5g18500, Description = Probable receptor-like protein kinase At5g18500, PFAM = PF00069)' T '29.4.1.55' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V' 'niben101scf01507_143789-148990' '(at2g42960 : 704.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G59110.1); Has 122679 Blast hits to 121177 proteins in 4382 species: Archae - 116; Bacteria - 14606; Metazoa - 44944; Fungi - 10490; Plants - 33768; Viruses - 414; Other Eukaryotes - 18341 (source: NCBI BLink). & (gnl|cdd|36401 : 401.0) no description available & (q8lpb4|pskr_dauca : 249.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 171.0) no description available & (reliability: 1408.0) & (original description: Putative At2g42960, Description = Probable receptor-like protein kinase At2g42960, PFAM = PF00069)' T '29.4.1.55' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V' 'niben101scf03114_404347-429852' '(at1g01540 : 287.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G01330.1); Has 118949 Blast hits to 117566 proteins in 4483 species: Archae - 118; Bacteria - 14365; Metazoa - 43793; Fungi - 9783; Plants - 32976; Viruses - 455; Other Eukaryotes - 17459 (source: NCBI BLink). & (gnl|cdd|36401 : 258.0) no description available & (q8l4h4|nork_medtr : 145.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 115.0) no description available & (reliability: 574.0) & (original description: Putative umc1285, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '29.4.1.55' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V' 'niben101scf03534_51831-55923' '(gnl|cdd|36401 : 273.0) no description available & (at4g02010 : 199.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G20300.1); Has 117558 Blast hits to 116281 proteins in 4412 species: Archae - 107; Bacteria - 13740; Metazoa - 43399; Fungi - 9953; Plants - 33036; Viruses - 373; Other Eukaryotes - 16950 (source: NCBI BLink). & (q8l4h4|nork_medtr : 191.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47550 : 155.0) no description available & (reliability: 378.0) & (original description: Putative pto, Description = Putative receptor-like protein kinase, PFAM = PF00069)' T '29.4.1.55' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V' 'niben101scf04007_455679-461041' '(at4g02630 : 535.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G01540.2); Has 118173 Blast hits to 116837 proteins in 4543 species: Archae - 107; Bacteria - 14277; Metazoa - 44024; Fungi - 9538; Plants - 32682; Viruses - 411; Other Eukaryotes - 17134 (source: NCBI BLink). & (gnl|cdd|36401 : 384.0) no description available & (q8lpb4|pskr_dauca : 241.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 161.0) no description available & (reliability: 1066.0) & (original description: Putative At1g01540, Description = Probable serine/threonine-protein kinase At1g01540, PFAM = PF00069)' T '29.4.1.55' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V' 'niben101scf04144_69603-74757' '(at2g42960 : 697.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G59110.1); Has 122679 Blast hits to 121177 proteins in 4382 species: Archae - 116; Bacteria - 14606; Metazoa - 44944; Fungi - 10490; Plants - 33768; Viruses - 414; Other Eukaryotes - 18341 (source: NCBI BLink). & (gnl|cdd|36401 : 401.0) no description available & (q8lpb4|pskr_dauca : 249.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 171.0) no description available & (reliability: 1394.0) & (original description: Putative At2g42960, Description = Probable receptor-like protein kinase At2g42960, PFAM = PF00069)' T '29.4.1.55' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V' 'niben101scf04995_7494-23810' '(at4g02630 : 594.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G01540.2); Has 118173 Blast hits to 116837 proteins in 4543 species: Archae - 107; Bacteria - 14277; Metazoa - 44024; Fungi - 9538; Plants - 32682; Viruses - 411; Other Eukaryotes - 17134 (source: NCBI BLink). & (gnl|cdd|36401 : 386.0) no description available & (q8lpb4|pskr_dauca : 235.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 162.0) no description available & (reliability: 1164.0) & (original description: Putative At1g01540, Description = Probable serine/threonine-protein kinase At1g01540, PFAM = PF00010;PF00069)' T '29.4.1.55' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V' 'niben101scf07576_441549-446760' '(at1g01540 : 667.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G01330.1); Has 118949 Blast hits to 117566 proteins in 4483 species: Archae - 118; Bacteria - 14365; Metazoa - 43793; Fungi - 9783; Plants - 32976; Viruses - 455; Other Eukaryotes - 17459 (source: NCBI BLink). & (gnl|cdd|36401 : 388.0) no description available & (q8lpb4|pskr_dauca : 249.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 160.0) no description available & (reliability: 1334.0) & (original description: Putative At1g01540, Description = Probable serine/threonine-protein kinase At1g01540, PFAM = PF00069)' T '29.4.1.56' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI' 'nbv0.3scaffold3926_3117-9842' '(at1g77280 : 820.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT1G21590.1); Has 117486 Blast hits to 116152 proteins in 3451 species: Archae - 119; Bacteria - 13475; Metazoa - 42728; Fungi - 10296; Plants - 33191; Viruses - 413; Other Eukaryotes - 17264 (source: NCBI BLink). & (gnl|cdd|36401 : 327.0) no description available & (q8lkz1|nork_pea : 204.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|29142 : 159.0) no description available & (reliability: 1640.0) & (original description: Putative At1g77280, Description = Adenine nucleotide alpha hydrolases-domain containing protein kinase, PFAM = PF00069;PF00582)' T '29.4.1.56' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI' 'nbv0.3scaffold5384_46007-53354' '(at2g18890 : 490.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G57670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 329.0) no description available & (q8l4h4|nork_medtr : 197.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 145.0) no description available & (reliability: 980.0) & (original description: Putative rrk1, Description = Rop-interacting receptor-like cytoplasmic kinase 1, PFAM = PF00069)' T '29.4.1.56' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI' 'nbv0.3scaffold9617_9887-12561' '(at5g35960 : 114.0) Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 95.9) no description available & (reliability: 228.0) & (original description: Putative rrk1, Description = Receptor-like cytosolic serine/threonine-protein kinase RBK2, PFAM = PF07714)' T '29.4.1.56' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI' 'nbv0.3scaffold22406_21768-31275' '(at5g65530 : 521.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: ROP binding protein kinases 1 (TAIR:AT5G10520.1); Has 113031 Blast hits to 111947 proteins in 4379 species: Archae - 102; Bacteria - 12808; Metazoa - 41761; Fungi - 9419; Plants - 32365; Viruses - 431; Other Eukaryotes - 16145 (source: NCBI BLink). & (gnl|cdd|36401 : 337.0) no description available & (q8l4h4|nork_medtr : 182.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 159.0) no description available & (reliability: 1042.0) & (original description: Putative RBK1, Description = Receptor-like cytosolic serine/threonine-protein kinase RBK1, PFAM = PF00069)' T '29.4.1.56' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI' 'nbv0.3scaffold57665_5904-12518' '(at5g18910 : 422.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: peroxisome; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ROP binding protein kinases 2 (TAIR:AT3G05140.1); Has 112793 Blast hits to 111645 proteins in 4265 species: Archae - 108; Bacteria - 12991; Metazoa - 42065; Fungi - 9590; Plants - 31347; Viruses - 418; Other Eukaryotes - 16274 (source: NCBI BLink). & (gnl|cdd|36401 : 334.0) no description available & (q8l4h4|nork_medtr : 190.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 164.0) no description available & (reliability: 844.0) & (original description: Putative rrk1, Description = Receptor-like cytosolic serine/threonine-protein kinase RBK2, PFAM = PF07714)' T '29.4.1.56' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI' 'nbv0.3scaffold60333_5500-10135' '(at5g35960 : 458.0) Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 327.0) no description available & (q8l4h4|nork_medtr : 182.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 159.0) no description available & (reliability: 916.0) & (original description: Putative rrk2, Description = Rop-interacting receptor-like cytoplasmic kinase 2, PFAM = PF00069)' T '29.4.1.56' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI' 'nbv0.3scaffold69649_2697-8741' '(at5g65530 : 479.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: ROP binding protein kinases 1 (TAIR:AT5G10520.1); Has 113031 Blast hits to 111947 proteins in 4379 species: Archae - 102; Bacteria - 12808; Metazoa - 41761; Fungi - 9419; Plants - 32365; Viruses - 431; Other Eukaryotes - 16145 (source: NCBI BLink). & (gnl|cdd|36401 : 327.0) no description available & (q8lpb4|pskr_dauca : 192.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 157.0) no description available & (reliability: 958.0) & (original description: Putative RBK1, Description = Receptor-like cytosolic serine/threonine-protein kinase RBK1, PFAM = PF07714)' T '29.4.1.56' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI' 'nbv0.5scaffold4425_95746-100381' '(at5g35960 : 453.0) Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 327.0) no description available & (q8l4h4|nork_medtr : 181.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 160.0) no description available & (reliability: 906.0) & (original description: Putative rrk1, Description = Receptor-like cytosolic serine/threonine-protein kinase RBK2, PFAM = PF00069)' T '29.4.1.56' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI' 'niben044scf00007095ctg002_3594-9125' '(at2g16750 : 459.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G35030.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 323.0) no description available & (q8l4h4|nork_medtr : 200.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 151.0) no description available & (reliability: 918.0) & (original description: Putative Os03g0241600, Description = Os03g0241600 protein, PFAM = PF07714;PF00582)' T '29.4.1.56' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI' 'niben101scf00069_1608904-1613552' '(at5g37790 : 593.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 306.0) no description available & (o24585|cri4_maize : 160.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 156.0) no description available & (reliability: 1186.0) & (original description: Putative At5g37790, Description = Protein kinase family protein, PFAM = PF00069)' T '29.4.1.56' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI' 'niben101scf00293_396185-401704' '(at5g63940 : 637.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT1G21590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 319.0) no description available & (q8lpb4|pskr_dauca : 204.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 162.0) no description available & (reliability: 1274.0) & (original description: Putative At5g63940, Description = At5g63940, PFAM = PF00582;PF00069)' T '29.4.1.56' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI' 'niben101scf00561_81292-87336' '(at5g10520 : 480.0) ROP binding protein kinases 1 (RBK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: defense response, incompatible interaction; LOCATED IN: cytosol, endomembrane system; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G65530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 327.0) no description available & (q8lpb4|pskr_dauca : 191.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 156.0) no description available & (reliability: 960.0) & (original description: Putative rrk1, Description = Receptor-like cytosolic serine/threonine-protein kinase RBK2, PFAM = PF07714)' T '29.4.1.56' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI' 'niben101scf00621_87387-99782' '(at5g18910 : 420.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: peroxisome; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ROP binding protein kinases 2 (TAIR:AT3G05140.1); Has 112793 Blast hits to 111645 proteins in 4265 species: Archae - 108; Bacteria - 12991; Metazoa - 42065; Fungi - 9590; Plants - 31347; Viruses - 418; Other Eukaryotes - 16274 (source: NCBI BLink). & (gnl|cdd|36401 : 332.0) no description available & (q8l4h4|nork_medtr : 188.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 160.0) no description available & (reliability: 840.0) & (original description: Putative RBK2, Description = Receptor-like cytosolic serine/threonine-protein kinase RBK2, PFAM = PF00069)' T '29.4.1.56' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI' 'niben101scf01438_120141-127754' '(at2g18890 : 501.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G57670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 333.0) no description available & (q8l4h4|nork_medtr : 199.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 146.0) no description available & (reliability: 1002.0) & (original description: Putative rrk1, Description = Rop-interacting receptor-like cytoplasmic kinase 1, PFAM = PF00069)' T '29.4.1.56' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI' 'niben101scf01626_14474-25434' '(at3g05140 : 504.0) ROP binding protein kinases 2 (RBK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18910.1); Has 106611 Blast hits to 105596 proteins in 3392 species: Archae - 84; Bacteria - 12146; Metazoa - 38869; Fungi - 8564; Plants - 31291; Viruses - 415; Other Eukaryotes - 15242 (source: NCBI BLink). & (gnl|cdd|36401 : 327.0) no description available & (q8lpb4|pskr_dauca : 191.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 160.0) no description available & (reliability: 1008.0) & (original description: Putative RBK2, Description = Receptor-like cytosolic serine/threonine-protein kinase RBK2, PFAM = PF07714)' T '29.4.1.56' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI' 'niben101scf01635_529120-537835' '(at5g57670 : 504.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: petal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G18890.1); Has 113420 Blast hits to 112131 proteins in 3664 species: Archae - 114; Bacteria - 13552; Metazoa - 41580; Fungi - 9353; Plants - 32095; Viruses - 456; Other Eukaryotes - 16270 (source: NCBI BLink). & (gnl|cdd|36401 : 303.0) no description available & (q8lpb4|pskr_dauca : 182.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 151.0) no description available & (reliability: 1008.0) & (original description: Putative rrk1, Description = Receptor-like cytosolic serine/threonine-protein kinase RBK2, PFAM = PF00069;PF00582)' T '29.4.1.56' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI' 'niben101scf02245_120848-125687' '(at5g37790 : 607.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 315.0) no description available & (o24585|cri4_maize : 183.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 155.0) no description available & (reliability: 1214.0) & (original description: Putative At5g37790, Description = Protein kinase family protein, PFAM = PF00069)' T '29.4.1.56' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI' 'niben101scf02452_118952-125613' '(at1g77280 : 821.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT1G21590.1); Has 117486 Blast hits to 116152 proteins in 3451 species: Archae - 119; Bacteria - 13475; Metazoa - 42728; Fungi - 10296; Plants - 33191; Viruses - 413; Other Eukaryotes - 17264 (source: NCBI BLink). & (gnl|cdd|36401 : 328.0) no description available & (q8lkz1|nork_pea : 207.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|29142 : 158.0) no description available & (reliability: 1642.0) & (original description: Putative At1g77280, Description = Adenine nucleotide alpha hydrolases-domain containing protein kinase, PFAM = PF00582;PF00069)' T '29.4.1.56' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI' 'niben101scf02621_416549-422061' '(at2g16750 : 460.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G35030.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 326.0) no description available & (q8l4h4|nork_medtr : 197.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 154.0) no description available & (reliability: 920.0) & (original description: Putative Os03g0241600, Description = Os03g0241600 protein, PFAM = PF00582;PF00069)' T '29.4.1.56' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI' 'niben101scf03497_1077535-1096884' '(at2g18890 : 492.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G57670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 333.0) no description available & (q8l4h4|nork_medtr : 197.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 146.0) no description available & (reliability: 984.0) & (original description: Putative rrk1, Description = Rop-interacting receptor-like cytoplasmic kinase 1, PFAM = PF00069)' T '29.4.1.56' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI' 'niben101scf03534_51831-55923' '(gnl|cdd|36401 : 273.0) no description available & (at4g02010 : 199.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G20300.1); Has 117558 Blast hits to 116281 proteins in 4412 species: Archae - 107; Bacteria - 13740; Metazoa - 43399; Fungi - 9953; Plants - 33036; Viruses - 373; Other Eukaryotes - 16950 (source: NCBI BLink). & (q8l4h4|nork_medtr : 191.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47550 : 155.0) no description available & (reliability: 364.0) & (original description: Putative pto, Description = Putative receptor-like protein kinase, PFAM = PF00069)' T '29.4.1.56' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI' 'niben101scf03913_101674-105990' '(gnl|cdd|36401 : 275.0) no description available & (at1g21590 : 231.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT1G77280.1); Has 117833 Blast hits to 116515 proteins in 3694 species: Archae - 139; Bacteria - 13671; Metazoa - 42887; Fungi - 10197; Plants - 33102; Viruses - 429; Other Eukaryotes - 17408 (source: NCBI BLink). & (q8l4h4|nork_medtr : 169.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 147.0) no description available & (reliability: 462.0) & (original description: Putative MpRLK26, Description = Adenine nucleotide alpha hydrolase-like domain kinase, PFAM = PF00069)' T '29.4.1.56' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI' 'niben101scf04782_240848-246055' '(at5g37790 : 611.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 308.0) no description available & (o24585|cri4_maize : 175.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 154.0) no description available & (reliability: 1222.0) & (original description: Putative At5g37790, Description = Protein kinase family protein, PFAM = PF00069)' T '29.4.1.56' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI' 'niben101scf05301_427821-447043' '(at5g35960 : 458.0) Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 323.0) no description available & (q8l4h4|nork_medtr : 178.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 162.0) no description available & (reliability: 916.0) & (original description: Putative rrk2, Description = Rop-interacting receptor-like cytoplasmic kinase 2, PFAM = PF07714)' T '29.4.1.56' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI' 'niben101scf09150_279042-286235' '(at5g18910 : 456.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: peroxisome; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ROP binding protein kinases 2 (TAIR:AT3G05140.1); Has 112793 Blast hits to 111645 proteins in 4265 species: Archae - 108; Bacteria - 12991; Metazoa - 42065; Fungi - 9590; Plants - 31347; Viruses - 418; Other Eukaryotes - 16274 (source: NCBI BLink). & (gnl|cdd|36401 : 316.0) no description available & (q8l4h4|nork_medtr : 187.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 150.0) no description available & (reliability: 912.0) & (original description: Putative RBK2, Description = Receptor-like cytosolic serine/threonine-protein kinase RBK2, PFAM = PF00069)' T '29.4.1.56' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI' 'niben101scf11723_198582-203309' '(at5g18910 : 446.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: peroxisome; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ROP binding protein kinases 2 (TAIR:AT3G05140.1); Has 112793 Blast hits to 111645 proteins in 4265 species: Archae - 108; Bacteria - 12991; Metazoa - 42065; Fungi - 9590; Plants - 31347; Viruses - 418; Other Eukaryotes - 16274 (source: NCBI BLink). & (gnl|cdd|36401 : 324.0) no description available & (q8l4h4|nork_medtr : 182.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 159.0) no description available & (reliability: 892.0) & (original description: Putative rrk2, Description = Rop-interacting receptor-like cytoplasmic kinase 2, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'nbv0.3scaffold352_126087-131728' '(gnl|cdd|36401 : 167.0) no description available & (at1g24030 : 117.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 120365 Blast hits to 119013 proteins in 4490 species: Archae - 114; Bacteria - 14164; Metazoa - 43937; Fungi - 10244; Plants - 33641; Viruses - 447; Other Eukaryotes - 17818 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 103.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 86.0) no description available & (reliability: 234.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF07714;PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'nbv0.3scaffold4058_58734-66321' '(at3g09830 : 538.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G03320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 374.0) no description available & (q8l4h4|nork_medtr : 221.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 166.0) no description available & (reliability: 1076.0) & (original description: Putative ESI47, Description = Protein kinase, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'nbv0.3scaffold5647_1493-6364' '(at1g20650 : 441.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G76370.1); Has 115469 Blast hits to 114023 proteins in 4226 species: Archae - 107; Bacteria - 13502; Metazoa - 42790; Fungi - 9725; Plants - 32710; Viruses - 380; Other Eukaryotes - 16255 (source: NCBI BLink). & (gnl|cdd|36401 : 362.0) no description available & (q8lkz1|nork_pea : 219.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|29142 : 168.0) no description available & (reliability: 882.0) & (original description: Putative BnaC08g19380D, Description = BnaC08g19380D protein, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'nbv0.3scaffold21532_1-9745' '(at5g13160 : 504.0) Mutant is defective in perception of Pseudomonas syringae avirulence gene avrPphB. Encodes a putative serine-threonine kinase.; avrPphB susceptible 1 (PBS1); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, kinase activity; INVOLVED IN: defense response to bacterium, incompatible interaction, protein amino acid autophosphorylation, N-terminal protein myristoylation, defense response; LOCATED IN: microsome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 366.0) no description available & (q8lkz1|nork_pea : 218.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 174.0) no description available & (reliability: 1008.0) & (original description: Putative CDL1, Description = Serine/threonine-protein kinase PBS1, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'nbv0.3scaffold40432_1-7323' '(at2g28940 : 463.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G09830.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 375.0) no description available & (q8lkz1|nork_pea : 206.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|29142 : 173.0) no description available & (reliability: 926.0) & (original description: Putative At2g28940, Description = At2g28940, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'nbv0.3scaffold49262_2579-11743' '(at2g05940 : 536.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G35580.1); Has 113425 Blast hits to 112177 proteins in 3510 species: Archae - 99; Bacteria - 13130; Metazoa - 41743; Fungi - 9248; Plants - 32526; Viruses - 361; Other Eukaryotes - 16318 (source: NCBI BLink). & (gnl|cdd|36401 : 404.0) no description available & (q8lkz1|nork_pea : 227.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 179.0) no description available & (reliability: 1072.0) & (original description: Putative ACIK1, Description = Avr9/Cf-9 induced kinase 1, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'nbv0.5scaffold135_100730-110213' '(at5g15080 : 659.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G01300.1); Has 114476 Blast hits to 113108 proteins in 3886 species: Archae - 103; Bacteria - 13473; Metazoa - 41986; Fungi - 9512; Plants - 32487; Viruses - 375; Other Eukaryotes - 16540 (source: NCBI BLink). & (gnl|cdd|36401 : 402.0) no description available & (q8lkz1|nork_pea : 234.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 182.0) no description available & (reliability: 1318.0) & (original description: Putative At5g15080, Description = Probable receptor-like protein kinase At5g15080, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'nbv0.5scaffold1030_259245-264614' '(at5g02290 : 514.0) Encodes a candidate protein kinase NAK that is similar to the oncogenes met and abl.; NAK; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G07570.1); Has 115443 Blast hits to 114179 proteins in 4179 species: Archae - 87; Bacteria - 13167; Metazoa - 42903; Fungi - 9438; Plants - 33067; Viruses - 364; Other Eukaryotes - 16417 (source: NCBI BLink). & (gnl|cdd|36401 : 400.0) no description available & (q8l4h4|nork_medtr : 212.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 183.0) no description available & (reliability: 1028.0) & (original description: Putative NAK, Description = Probable serine/threonine-protein kinase NAK, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'nbv0.5scaffold1085_500915-515295' '(at5g13160 : 676.0) Mutant is defective in perception of Pseudomonas syringae avirulence gene avrPphB. Encodes a putative serine-threonine kinase.; avrPphB susceptible 1 (PBS1); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, kinase activity; INVOLVED IN: defense response to bacterium, incompatible interaction, protein amino acid autophosphorylation, N-terminal protein myristoylation, defense response; LOCATED IN: microsome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 419.0) no description available & (q8lkz1|nork_pea : 248.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 176.0) no description available & (reliability: 1352.0) & (original description: Putative PBS1, Description = Serine/threonine-protein kinase PBS1, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'nbv0.5scaffold1087_251032-255715' '(at3g24790 : 438.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G07070.1); Has 116071 Blast hits to 114660 proteins in 4323 species: Archae - 99; Bacteria - 13128; Metazoa - 43073; Fungi - 9937; Plants - 33033; Viruses - 314; Other Eukaryotes - 16487 (source: NCBI BLink). & (gnl|cdd|36401 : 369.0) no description available & (q8l4h4|nork_medtr : 235.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 162.0) no description available & (reliability: 876.0) & (original description: Putative CDL1, Description = Serine/threonine-protein kinase PBS1, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'nbv0.5scaffold1898_1-6265' '(at5g02800 : 553.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 115691 Blast hits to 114176 proteins in 4291 species: Archae - 101; Bacteria - 13423; Metazoa - 42779; Fungi - 9601; Plants - 32894; Viruses - 373; Other Eukaryotes - 16520 (source: NCBI BLink). & (gnl|cdd|36401 : 398.0) no description available & (q8l4h4|nork_medtr : 249.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 181.0) no description available & (reliability: 1106.0) & (original description: Putative CDL1, Description = Serine/threonine-protein kinase CDL1, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben044scf00003177ctg005_1743-9847' '(at5g15080 : 658.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G01300.1); Has 114476 Blast hits to 113108 proteins in 3886 species: Archae - 103; Bacteria - 13473; Metazoa - 41986; Fungi - 9512; Plants - 32487; Viruses - 375; Other Eukaryotes - 16540 (source: NCBI BLink). & (gnl|cdd|36401 : 405.0) no description available & (q8lkz1|nork_pea : 236.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 178.0) no description available & (reliability: 1316.0) & (original description: Putative At5g15080, Description = Probable receptor-like protein kinase At5g15080, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben044scf00005407ctg013_956-5614' '(at1g20650 : 499.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G76370.1); Has 115469 Blast hits to 114023 proteins in 4226 species: Archae - 107; Bacteria - 13502; Metazoa - 42790; Fungi - 9725; Plants - 32710; Viruses - 380; Other Eukaryotes - 16255 (source: NCBI BLink). & (gnl|cdd|36401 : 387.0) no description available & (q8lkz1|nork_pea : 241.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|29142 : 168.0) no description available & (reliability: 998.0) & (original description: Putative BnaC08g19380D, Description = BnaC08g19380D protein, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben044scf00005698ctg028_1888-7707' '(gnl|cdd|36401 : 167.0) no description available & (at1g24030 : 117.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 120365 Blast hits to 119013 proteins in 4490 species: Archae - 114; Bacteria - 14164; Metazoa - 43937; Fungi - 10244; Plants - 33641; Viruses - 447; Other Eukaryotes - 17818 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 105.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47550 : 87.6) no description available & (reliability: 234.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF07714;PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben044scf00006577ctg015_1-837' '(at1g76360 : 127.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G17220.2); Has 116163 Blast hits to 114236 proteins in 3679 species: Archae - 95; Bacteria - 13695; Metazoa - 42201; Fungi - 9798; Plants - 33057; Viruses - 410; Other Eukaryotes - 16907 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative MLPK, Description = Putative serine/threonine-protein kinase Cx32, chloroplastic, PFAM = )' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben044scf00008512ctg008_243-3481' '(at4g35600 : 114.0) plant-type connexin (gap junction-type protein), a component of plasmodesmata; CONNEXIN 32; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G17220.2). & (reliability: 228.0) & (original description: Putative APK1A, Description = Putative serine/threonine-protein kinase Cx32, chloroplastic, PFAM = )' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben044scf00009258ctg007_666-4740' '(at2g17220 : 384.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G76360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 300.0) no description available & (q8lkz1|nork_pea : 202.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|88314 : 151.0) no description available & (reliability: 768.0) & (original description: Putative NAK, Description = Putative serine/threonine-protein kinase Cx32, chloroplastic, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben044scf00016559ctg011_1-6313' '(at1g14370 : 429.0) Encodes protein kinase APK2a.; protein kinase 2A (APK2A); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase 2B (TAIR:AT2G02800.2); Has 112844 Blast hits to 111359 proteins in 3847 species: Archae - 89; Bacteria - 13219; Metazoa - 41419; Fungi - 9318; Plants - 32676; Viruses - 341; Other Eukaryotes - 15782 (source: NCBI BLink). & (gnl|cdd|36401 : 362.0) no description available & (q8l4h4|nork_medtr : 207.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 184.0) no description available & (reliability: 858.0) & (original description: Putative BIK1, Description = Protein kinase 2B, chloroplastic, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben044scf00020322ctg005_22524-29900' '(at5g56460 : 585.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G01020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 374.0) no description available & (q8l4h4|nork_medtr : 195.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 163.0) no description available & (reliability: 1170.0) & (original description: Putative At5g56460, Description = Probable receptor-like protein kinase At5g56460, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben044scf00021752ctg000_7076-12437' '(at5g47070 : 443.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G17660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 370.0) no description available & (q8l4h4|nork_medtr : 211.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 177.0) no description available & (reliability: 886.0) & (original description: Putative At5g47070, Description = Probable receptor-like protein kinase At5g47070, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben044scf00027892ctg015_4997-12946' '(at1g76360 : 473.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G17220.2); Has 116163 Blast hits to 114236 proteins in 3679 species: Archae - 95; Bacteria - 13695; Metazoa - 42201; Fungi - 9798; Plants - 33057; Viruses - 410; Other Eukaryotes - 16907 (source: NCBI BLink). & (gnl|cdd|36401 : 379.0) no description available & (q8l4h4|nork_medtr : 254.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 184.0) no description available & (reliability: 946.0) & (original description: Putative At4g35600, Description = Probable serine/threonine-protein kinase Cx32, chloroplastic, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben044scf00028219ctg003_23519-29676' '(at2g02800 : 580.0) Encodes protein kinase APK2b.; protein kinase 2B (APK2B); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase 2A (TAIR:AT1G14370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 391.0) no description available & (q8l4h4|nork_medtr : 230.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 174.0) no description available & (reliability: 1160.0) & (original description: Putative APK2B, Description = Protein kinase 2B, chloroplastic, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben044scf00029131ctg000_2126-7482' '(at2g02800 : 578.0) Encodes protein kinase APK2b.; protein kinase 2B (APK2B); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase 2A (TAIR:AT1G14370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 398.0) no description available & (q8l4h4|nork_medtr : 230.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 178.0) no description available & (reliability: 1156.0) & (original description: Putative BnaA02g36850D, Description = BnaA02g36850D protein, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben044scf00029137ctg012_20453-25914' '(at5g02290 : 523.0) Encodes a candidate protein kinase NAK that is similar to the oncogenes met and abl.; NAK; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G07570.1); Has 115443 Blast hits to 114179 proteins in 4179 species: Archae - 87; Bacteria - 13167; Metazoa - 42903; Fungi - 9438; Plants - 33067; Viruses - 364; Other Eukaryotes - 16417 (source: NCBI BLink). & (gnl|cdd|36401 : 393.0) no description available & (q8l4h4|nork_medtr : 213.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 184.0) no description available & (reliability: 1046.0) & (original description: Putative NAK, Description = Probable serine/threonine-protein kinase NAK, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben044scf00031691ctg007_10170-15821' '(at1g07870 : 520.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to salt stress; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G28590.1). & (gnl|cdd|36401 : 389.0) no description available & (q8l4h4|nork_medtr : 239.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 179.0) no description available & (reliability: 1040.0) & (original description: Putative At1g07870, Description = Probable serine/threonine-protein kinase RLCKVII, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben044scf00036297ctg007_1723-7272' '(at5g02800 : 556.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 115691 Blast hits to 114176 proteins in 4291 species: Archae - 101; Bacteria - 13423; Metazoa - 42779; Fungi - 9601; Plants - 32894; Viruses - 373; Other Eukaryotes - 16520 (source: NCBI BLink). & (gnl|cdd|36401 : 397.0) no description available & (q8l4h4|nork_medtr : 239.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 182.0) no description available & (reliability: 1112.0) & (original description: Putative CDL1, Description = Serine/threonine-protein kinase CDL1, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben044scf00037717ctg002_8007-15162' '(at5g15080 : 672.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G01300.1); Has 114476 Blast hits to 113108 proteins in 3886 species: Archae - 103; Bacteria - 13473; Metazoa - 41986; Fungi - 9512; Plants - 32487; Viruses - 375; Other Eukaryotes - 16540 (source: NCBI BLink). & (gnl|cdd|36401 : 408.0) no description available & (q8lkz1|nork_pea : 231.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 187.0) no description available & (reliability: 1344.0) & (original description: Putative At5g15080, Description = Probable receptor-like protein kinase At5g15080, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben044scf00038737ctg003_8951-14265' '(at1g14370 : 448.0) Encodes protein kinase APK2a.; protein kinase 2A (APK2A); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase 2B (TAIR:AT2G02800.2); Has 112844 Blast hits to 111359 proteins in 3847 species: Archae - 89; Bacteria - 13219; Metazoa - 41419; Fungi - 9318; Plants - 32676; Viruses - 341; Other Eukaryotes - 15782 (source: NCBI BLink). & (gnl|cdd|36401 : 359.0) no description available & (q8l4h4|nork_medtr : 215.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 179.0) no description available & (reliability: 896.0) & (original description: Putative BIK1, Description = Protein kinase 2B, chloroplastic, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben044scf00044529ctg002_1-4784' '(at4g13190 : 395.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G24790.1); Has 115847 Blast hits to 114617 proteins in 4231 species: Archae - 103; Bacteria - 13752; Metazoa - 42167; Fungi - 9708; Plants - 32895; Viruses - 382; Other Eukaryotes - 16840 (source: NCBI BLink). & (gnl|cdd|36401 : 356.0) no description available & (q8l4h4|nork_medtr : 210.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 157.0) no description available & (reliability: 790.0) & (original description: Putative CDL1, Description = Serine/threonine-protein kinase PBS1, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben044scf00046018ctg000_6820-12880' '(at1g07870 : 511.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to salt stress; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G28590.1). & (gnl|cdd|36401 : 381.0) no description available & (q8l4h4|nork_medtr : 233.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 172.0) no description available & (reliability: 1022.0) & (original description: Putative At1g07870, Description = Probable serine/threonine-protein kinase RLCKVII, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben044scf00053371ctg004_3072-8262' '(at1g24030 : 597.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 120365 Blast hits to 119013 proteins in 4490 species: Archae - 114; Bacteria - 14164; Metazoa - 43937; Fungi - 10244; Plants - 33641; Viruses - 447; Other Eukaryotes - 17818 (source: NCBI BLink). & (gnl|cdd|36401 : 363.0) no description available & (q8l4h4|nork_medtr : 222.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 176.0) no description available & (reliability: 1194.0) & (original description: Putative MpRLK22, Description = Receptor-like kinase, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben044scf00059228ctg001_296-7375' '(at3g20530 : 487.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 115048 Blast hits to 113699 proteins in 4223 species: Archae - 109; Bacteria - 13576; Metazoa - 42161; Fungi - 9618; Plants - 32810; Viruses - 348; Other Eukaryotes - 16426 (source: NCBI BLink). & (gnl|cdd|36401 : 400.0) no description available & (q8l4h4|nork_medtr : 252.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 174.0) no description available & (reliability: 974.0) & (original description: Putative BnaC03g41630D, Description = BnaC03g41630D protein, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf00082_18641-21277' '(at5g18610 : 248.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G13160.1). & (gnl|cdd|36401 : 156.0) no description available & (q8l4h4|nork_medtr : 94.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 90.6) no description available & (reliability: 496.0) & (original description: Putative CDL1, Description = Serine/threonine-protein kinase PBS1, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf00157_201108-210271' '(at3g20530 : 409.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 115048 Blast hits to 113699 proteins in 4223 species: Archae - 109; Bacteria - 13576; Metazoa - 42161; Fungi - 9618; Plants - 32810; Viruses - 348; Other Eukaryotes - 16426 (source: NCBI BLink). & (gnl|cdd|36401 : 320.0) no description available & (q8lkz1|nork_pea : 189.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|84488 : 129.0) no description available & (reliability: 818.0) & (original description: Putative CDL1, Description = Serine/threonine-protein kinase PBS1, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf00177_911277-919523' '(gnl|cdd|36401 : 267.0) no description available & (at5g40380 : 194.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (CRK42); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (TAIR:AT1G70530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29142 : 172.0) no description available & (o24585|cri4_maize : 158.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 364.0) & (original description: Putative Sb08g000610, Description = Putative uncharacterized protein Sb08g000610, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf00177_939763-944390' '(at3g07070 : 447.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G24790.1); Has 117663 Blast hits to 116291 proteins in 4377 species: Archae - 107; Bacteria - 13587; Metazoa - 43815; Fungi - 9836; Plants - 33095; Viruses - 347; Other Eukaryotes - 16876 (source: NCBI BLink). & (gnl|cdd|36401 : 375.0) no description available & (q8l4h4|nork_medtr : 239.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 166.0) no description available & (reliability: 894.0) & (original description: Putative At3g07070, Description = Serine/threonine-protein kinase At3g07070, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf00199_662873-668458' '(at5g01020 : 691.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G05940.1); Has 117465 Blast hits to 116000 proteins in 4235 species: Archae - 97; Bacteria - 13843; Metazoa - 43298; Fungi - 9750; Plants - 33095; Viruses - 372; Other Eukaryotes - 17010 (source: NCBI BLink). & (gnl|cdd|36401 : 399.0) no description available & (q8l4h4|nork_medtr : 242.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 177.0) no description available & (reliability: 1382.0) & (original description: Putative At5g01020, Description = Serine/threonine-protein kinase At5g01020, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf00482_686690-691877' '(at1g07870 : 522.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to salt stress; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G28590.1). & (gnl|cdd|36401 : 387.0) no description available & (q8lkz1|nork_pea : 230.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 182.0) no description available & (reliability: 1044.0) & (original description: Putative At1g07870, Description = Probable serine/threonine-protein kinase RLCKVII, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf00585_219928-227948' '(at2g17220 : 449.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G76360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 374.0) no description available & (q8l4h4|nork_medtr : 211.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 179.0) no description available & (reliability: 898.0) & (original description: Putative At4g35600, Description = Probable serine/threonine-protein kinase Cx32, chloroplastic, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf00635_452522-457733' '(at5g02290 : 521.0) Encodes a candidate protein kinase NAK that is similar to the oncogenes met and abl.; NAK; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G07570.1); Has 115443 Blast hits to 114179 proteins in 4179 species: Archae - 87; Bacteria - 13167; Metazoa - 42903; Fungi - 9438; Plants - 33067; Viruses - 364; Other Eukaryotes - 16417 (source: NCBI BLink). & (gnl|cdd|36401 : 392.0) no description available & (q8l4h4|nork_medtr : 213.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 184.0) no description available & (reliability: 1042.0) & (original description: Putative NAK, Description = Probable serine/threonine-protein kinase NAK, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf00712_1315240-1320045' '(at1g20650 : 497.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G76370.1); Has 115469 Blast hits to 114023 proteins in 4226 species: Archae - 107; Bacteria - 13502; Metazoa - 42790; Fungi - 9725; Plants - 32710; Viruses - 380; Other Eukaryotes - 16255 (source: NCBI BLink). & (gnl|cdd|36401 : 387.0) no description available & (q8lkz1|nork_pea : 241.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|29142 : 169.0) no description available & (reliability: 994.0) & (original description: Putative At3g07070, Description = Serine/threonine-protein kinase At3g07070, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf00712_1361659-1369305' '(at1g76360 : 475.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G17220.2); Has 116163 Blast hits to 114236 proteins in 3679 species: Archae - 95; Bacteria - 13695; Metazoa - 42201; Fungi - 9798; Plants - 33057; Viruses - 410; Other Eukaryotes - 16907 (source: NCBI BLink). & (gnl|cdd|36401 : 382.0) no description available & (q8l4h4|nork_medtr : 254.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 183.0) no description available & (reliability: 950.0) & (original description: Putative NAK, Description = Putative serine/threonine-protein kinase Cx32, chloroplastic, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf00870_1290395-1294991' '(at2g05940 : 524.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G35580.1); Has 113425 Blast hits to 112177 proteins in 3510 species: Archae - 99; Bacteria - 13130; Metazoa - 41743; Fungi - 9248; Plants - 32526; Viruses - 361; Other Eukaryotes - 16318 (source: NCBI BLink). & (gnl|cdd|36401 : 398.0) no description available & (q8lkz1|nork_pea : 235.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 179.0) no description available & (reliability: 1048.0) & (original description: Putative At1g72540, Description = Putative receptor-like protein kinase At1g72540, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf01055_195300-201471' '(at5g13160 : 436.0) Mutant is defective in perception of Pseudomonas syringae avirulence gene avrPphB. Encodes a putative serine-threonine kinase.; avrPphB susceptible 1 (PBS1); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, kinase activity; INVOLVED IN: defense response to bacterium, incompatible interaction, protein amino acid autophosphorylation, N-terminal protein myristoylation, defense response; LOCATED IN: microsome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 377.0) no description available & (q8l4h4|nork_medtr : 231.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 169.0) no description available & (reliability: 872.0) & (original description: Putative CDL1, Description = Serine/threonine-protein kinase PBS1, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf01378_11256-16988' '(at2g28930 : 547.0) protein kinase 1B (PK1B); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G07570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 387.0) no description available & (q8l4h4|nork_medtr : 221.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 184.0) no description available & (reliability: 1094.0) & (original description: Putative APK1A, Description = Protein kinase APK1A, chloroplastic, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf01521_1374326-1384321' '(at2g02800 : 578.0) Encodes protein kinase APK2b.; protein kinase 2B (APK2B); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase 2A (TAIR:AT1G14370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 388.0) no description available & (q8l4h4|nork_medtr : 226.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 176.0) no description available & (reliability: 1156.0) & (original description: Putative APK2B, Description = Protein kinase 2B, chloroplastic, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf01745_452360-457721' '(at5g47070 : 445.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G17660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 370.0) no description available & (q8l4h4|nork_medtr : 209.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 176.0) no description available & (reliability: 890.0) & (original description: Putative At5g47070, Description = Probable receptor-like protein kinase At5g47070, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf01848_264873-270037' '(at4g13190 : 419.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G24790.1); Has 115847 Blast hits to 114617 proteins in 4231 species: Archae - 103; Bacteria - 13752; Metazoa - 42167; Fungi - 9708; Plants - 32895; Viruses - 382; Other Eukaryotes - 16840 (source: NCBI BLink). & (gnl|cdd|36401 : 359.0) no description available & (q8l4h4|nork_medtr : 225.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 159.0) no description available & (reliability: 838.0) & (original description: Putative CDL1, Description = Serine/threonine-protein kinase PBS1, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf02145_377812-386493' '(at4g22130 : 885.0) STRUBBELIG-receptor family 8 (SRF8); FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 6 (TAIR:AT1G53730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 341.0) no description available & (q8l4h4|nork_medtr : 202.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 165.0) no description available & (reliability: 1770.0) & (original description: Putative SRF8, Description = Protein STRUBBELIG-RECEPTOR FAMILY 8, PFAM = PF13855;PF00069;PF08263)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf02227_291538-309130' '(at5g02800 : 561.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 115691 Blast hits to 114176 proteins in 4291 species: Archae - 101; Bacteria - 13423; Metazoa - 42779; Fungi - 9601; Plants - 32894; Viruses - 373; Other Eukaryotes - 16520 (source: NCBI BLink). & (gnl|cdd|36401 : 401.0) no description available & (q8l4h4|nork_medtr : 244.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 183.0) no description available & (reliability: 1122.0) & (original description: Putative CDL1, Description = Serine/threonine-protein kinase CDL1, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf02460_140854-145334' '(at2g05940 : 567.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G35580.1); Has 113425 Blast hits to 112177 proteins in 3510 species: Archae - 99; Bacteria - 13130; Metazoa - 41743; Fungi - 9248; Plants - 32526; Viruses - 361; Other Eukaryotes - 16318 (source: NCBI BLink). & (gnl|cdd|36401 : 396.0) no description available & (q8lkz1|nork_pea : 218.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 175.0) no description available & (reliability: 1134.0) & (original description: Putative ACIK1, Description = Avr9/Cf-9 induced kinase 1, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf02606_541731-546630' '(at3g07070 : 424.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G24790.1); Has 117663 Blast hits to 116291 proteins in 4377 species: Archae - 107; Bacteria - 13587; Metazoa - 43815; Fungi - 9836; Plants - 33095; Viruses - 347; Other Eukaryotes - 16876 (source: NCBI BLink). & (gnl|cdd|36401 : 355.0) no description available & (q8l4h4|nork_medtr : 226.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 158.0) no description available & (reliability: 848.0) & (original description: Putative At3g07070, Description = Serine/threonine-protein kinase At3g07070, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf02752_521036-534388' '(at5g18610 : 711.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G13160.1). & (gnl|cdd|36401 : 404.0) no description available & (q8lkz1|nork_pea : 226.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 179.0) no description available & (reliability: 1422.0) & (original description: Putative At1g07870, Description = Probable serine/threonine-protein kinase RLCKVII, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf02996_361917-377971' '(at5g13160 : 687.0) Mutant is defective in perception of Pseudomonas syringae avirulence gene avrPphB. Encodes a putative serine-threonine kinase.; avrPphB susceptible 1 (PBS1); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, kinase activity; INVOLVED IN: defense response to bacterium, incompatible interaction, protein amino acid autophosphorylation, N-terminal protein myristoylation, defense response; LOCATED IN: microsome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 413.0) no description available & (q8lkz1|nork_pea : 248.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 176.0) no description available & (reliability: 1374.0) & (original description: Putative PBS1, Description = Serine/threonine-protein kinase PBS1, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf03100_78227-85740' '(at5g15080 : 504.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G01300.1); Has 114476 Blast hits to 113108 proteins in 3886 species: Archae - 103; Bacteria - 13473; Metazoa - 41986; Fungi - 9512; Plants - 32487; Viruses - 375; Other Eukaryotes - 16540 (source: NCBI BLink). & (gnl|cdd|36401 : 403.0) no description available & (q8lkz1|nork_pea : 240.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 188.0) no description available & (reliability: 1008.0) & (original description: Putative NAK, Description = Probable serine/threonine-protein kinase NAK, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf03133_166229-171036' '(at1g20650 : 494.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G76370.1); Has 115469 Blast hits to 114023 proteins in 4226 species: Archae - 107; Bacteria - 13502; Metazoa - 42790; Fungi - 9725; Plants - 32710; Viruses - 380; Other Eukaryotes - 16255 (source: NCBI BLink). & (gnl|cdd|36401 : 381.0) no description available & (q8lkz1|nork_pea : 232.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 175.0) no description available & (reliability: 988.0) & (original description: Putative BnaC08g19380D, Description = BnaC08g19380D protein, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf03265_9733-12819' '(at3g07070 : 171.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G24790.1); Has 117663 Blast hits to 116291 proteins in 4377 species: Archae - 107; Bacteria - 13587; Metazoa - 43815; Fungi - 9836; Plants - 33095; Viruses - 347; Other Eukaryotes - 16876 (source: NCBI BLink). & (gnl|cdd|36401 : 147.0) no description available & (gnl|cdd|87344 : 85.6) no description available & (reliability: 342.0) & (original description: Putative CDL1, Description = Serine/threonine-protein kinase PBS1, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf03268_342076-347791' '(at2g05940 : 499.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G35580.1); Has 113425 Blast hits to 112177 proteins in 3510 species: Archae - 99; Bacteria - 13130; Metazoa - 41743; Fungi - 9248; Plants - 32526; Viruses - 361; Other Eukaryotes - 16318 (source: NCBI BLink). & (gnl|cdd|36401 : 393.0) no description available & (q8l4h4|nork_medtr : 228.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 187.0) no description available & (reliability: 998.0) & (original description: Putative BnaCnng45720D, Description = BnaCnng45720D protein, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf03493_4786-9630' '(at1g07570 : 514.0) Protein kinase capable of phosphorylating tyrosine, serine, and threonine residues; APK1A; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: protein kinase 1B (TAIR:AT2G28930.3). & (gnl|cdd|36401 : 390.0) no description available & (q8l4h4|nork_medtr : 232.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 171.0) no description available & (reliability: 1028.0) & (original description: Putative APK1A, Description = Protein kinase APK1A, chloroplastic, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf03534_51831-55923' '(gnl|cdd|36401 : 273.0) no description available & (at4g02010 : 199.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G20300.1); Has 117558 Blast hits to 116281 proteins in 4412 species: Archae - 107; Bacteria - 13740; Metazoa - 43399; Fungi - 9953; Plants - 33036; Viruses - 373; Other Eukaryotes - 16950 (source: NCBI BLink). & (q8l4h4|nork_medtr : 191.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47550 : 155.0) no description available & (reliability: 364.0) & (original description: Putative pto, Description = Putative receptor-like protein kinase, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf03565_865591-875052' '(at2g39110 : 275.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G09830.2); Has 116486 Blast hits to 115184 proteins in 3894 species: Archae - 105; Bacteria - 13150; Metazoa - 42637; Fungi - 10037; Plants - 33183; Viruses - 432; Other Eukaryotes - 16942 (source: NCBI BLink). & (gnl|cdd|36401 : 243.0) no description available & (gnl|cdd|47549 : 125.0) no description available & (q8lpb4|pskr_dauca : 112.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 550.0) & (original description: Putative AFSK, Description = Putative receptor-like protein kinase, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf03619_36686-41490' '(at1g61590 : 604.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G05940.1); Has 114879 Blast hits to 113543 proteins in 3746 species: Archae - 105; Bacteria - 13385; Metazoa - 42146; Fungi - 9605; Plants - 32529; Viruses - 373; Other Eukaryotes - 16736 (source: NCBI BLink). & (gnl|cdd|36401 : 385.0) no description available & (q8l4h4|nork_medtr : 228.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 174.0) no description available & (reliability: 1208.0) & (original description: Putative ACIK1, Description = Avr9/Cf-9 induced kinase 1, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf03673_368136-376621' '(at2g17220 : 488.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G76360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 373.0) no description available & (q8lkz1|nork_pea : 239.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 180.0) no description available & (reliability: 976.0) & (original description: Putative At4g35600, Description = Probable serine/threonine-protein kinase Cx32, chloroplastic, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf04294_592919-597876' '(at2g17220 : 529.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G76360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 382.0) no description available & (q8l4h4|nork_medtr : 241.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 176.0) no description available & (reliability: 1058.0) & (original description: Putative At2g17220, Description = At2g17220/T23A1.8, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf04339_609887-616030' '(at3g20530 : 553.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 115048 Blast hits to 113699 proteins in 4223 species: Archae - 109; Bacteria - 13576; Metazoa - 42161; Fungi - 9618; Plants - 32810; Viruses - 348; Other Eukaryotes - 16426 (source: NCBI BLink). & (gnl|cdd|36401 : 407.0) no description available & (q8lkz1|nork_pea : 253.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 174.0) no description available & (reliability: 1106.0) & (original description: Putative BnaC03g41630D, Description = BnaC03g41630D protein, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf04487_448468-452568' '(at2g39110 : 488.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G09830.2); Has 116486 Blast hits to 115184 proteins in 3894 species: Archae - 105; Bacteria - 13150; Metazoa - 42637; Fungi - 10037; Plants - 33183; Viruses - 432; Other Eukaryotes - 16942 (source: NCBI BLink). & (gnl|cdd|36401 : 379.0) no description available & (q8l4h4|nork_medtr : 198.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 168.0) no description available & (reliability: 976.0) & (original description: Putative AFSK, Description = Ser/thr protein kinase, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf05009_300963-313577' '(at5g02800 : 535.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 115691 Blast hits to 114176 proteins in 4291 species: Archae - 101; Bacteria - 13423; Metazoa - 42779; Fungi - 9601; Plants - 32894; Viruses - 373; Other Eukaryotes - 16520 (source: NCBI BLink). & (gnl|cdd|36401 : 416.0) no description available & (o24585|cri4_maize : 228.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 182.0) no description available & (reliability: 1070.0) & (original description: Putative CDL1, Description = Serine/threonine-protein kinase CDL1, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf05081_152083-159943' '(at3g09830 : 527.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G03320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 362.0) no description available & (q8l4h4|nork_medtr : 209.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 158.0) no description available & (reliability: 1054.0) & (original description: Putative Os02g0819600, Description = Os02g0819600 protein, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf05476_167273-172267' '(at2g28930 : 518.0) protein kinase 1B (PK1B); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G07570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 398.0) no description available & (q8l4h4|nork_medtr : 213.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 182.0) no description available & (reliability: 1036.0) & (original description: Putative APK1A, Description = Protein kinase APK1A, chloroplastic, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf05720_19191-25099' '(at5g15080 : 506.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G01300.1); Has 114476 Blast hits to 113108 proteins in 3886 species: Archae - 103; Bacteria - 13473; Metazoa - 41986; Fungi - 9512; Plants - 32487; Viruses - 375; Other Eukaryotes - 16540 (source: NCBI BLink). & (gnl|cdd|36401 : 400.0) no description available & (q8lkz1|nork_pea : 241.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 187.0) no description available & (reliability: 1012.0) & (original description: Putative Sb10g004793, Description = Putative uncharacterized protein Sb10g004793, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf05916_59390-66120' '(at1g14370 : 431.0) Encodes protein kinase APK2a.; protein kinase 2A (APK2A); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase 2B (TAIR:AT2G02800.2); Has 112844 Blast hits to 111359 proteins in 3847 species: Archae - 89; Bacteria - 13219; Metazoa - 41419; Fungi - 9318; Plants - 32676; Viruses - 341; Other Eukaryotes - 15782 (source: NCBI BLink). & (gnl|cdd|36401 : 363.0) no description available & (q8l4h4|nork_medtr : 207.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 184.0) no description available & (reliability: 862.0) & (original description: Putative BnaA08g20040D, Description = BnaA08g20040D protein, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf06084_100783-106535' '(at3g20530 : 493.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 115048 Blast hits to 113699 proteins in 4223 species: Archae - 109; Bacteria - 13576; Metazoa - 42161; Fungi - 9618; Plants - 32810; Viruses - 348; Other Eukaryotes - 16426 (source: NCBI BLink). & (gnl|cdd|36401 : 400.0) no description available & (q8l4h4|nork_medtr : 256.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 173.0) no description available & (reliability: 986.0) & (original description: Putative BnaA03g59650D, Description = BnaA03g59650D protein, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf06172_287018-296715' '(at5g15080 : 524.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G01300.1); Has 114476 Blast hits to 113108 proteins in 3886 species: Archae - 103; Bacteria - 13473; Metazoa - 41986; Fungi - 9512; Plants - 32487; Viruses - 375; Other Eukaryotes - 16540 (source: NCBI BLink). & (gnl|cdd|36401 : 404.0) no description available & (q8lkz1|nork_pea : 234.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 178.0) no description available & (reliability: 1048.0) & (original description: Putative At5g15080, Description = Probable receptor-like protein kinase At5g15080, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf06739_510920-515756' '(at2g05940 : 589.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G35580.1); Has 113425 Blast hits to 112177 proteins in 3510 species: Archae - 99; Bacteria - 13130; Metazoa - 41743; Fungi - 9248; Plants - 32526; Viruses - 361; Other Eukaryotes - 16318 (source: NCBI BLink). & (gnl|cdd|36401 : 397.0) no description available & (q8lkz1|nork_pea : 228.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 174.0) no description available & (reliability: 1178.0) & (original description: Putative At1g72540, Description = Putative receptor-like protein kinase At1g72540, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf06750_192769-210438' '(at5g15080 : 659.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G01300.1); Has 114476 Blast hits to 113108 proteins in 3886 species: Archae - 103; Bacteria - 13473; Metazoa - 41986; Fungi - 9512; Plants - 32487; Viruses - 375; Other Eukaryotes - 16540 (source: NCBI BLink). & (gnl|cdd|36401 : 403.0) no description available & (q8lkz1|nork_pea : 233.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 181.0) no description available & (reliability: 1318.0) & (original description: Putative At5g15080, Description = Probable receptor-like protein kinase At5g15080, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf07061_181871-187770' '(at3g07070 : 511.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G24790.1); Has 117663 Blast hits to 116291 proteins in 4377 species: Archae - 107; Bacteria - 13587; Metazoa - 43815; Fungi - 9836; Plants - 33095; Viruses - 347; Other Eukaryotes - 16876 (source: NCBI BLink). & (gnl|cdd|36401 : 389.0) no description available & (q8lkz1|nork_pea : 239.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|84488 : 167.0) no description available & (reliability: 1022.0) & (original description: Putative At3g07070, Description = Serine/threonine-protein kinase At3g07070, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf08874_119723-127430' '(at5g15080 : 672.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G01300.1); Has 114476 Blast hits to 113108 proteins in 3886 species: Archae - 103; Bacteria - 13473; Metazoa - 41986; Fungi - 9512; Plants - 32487; Viruses - 375; Other Eukaryotes - 16540 (source: NCBI BLink). & (gnl|cdd|36401 : 410.0) no description available & (q8lkz1|nork_pea : 231.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 188.0) no description available & (reliability: 1344.0) & (original description: Putative At5g15080, Description = Probable receptor-like protein kinase At5g15080, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf08898_103021-110247' '(at5g56460 : 605.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G01020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 373.0) no description available & (q8l4h4|nork_medtr : 208.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 161.0) no description available & (reliability: 1210.0) & (original description: Putative At5g56460, Description = Probable receptor-like protein kinase At5g56460, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf09004_62624-69965' '(at1g14370 : 442.0) Encodes protein kinase APK2a.; protein kinase 2A (APK2A); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase 2B (TAIR:AT2G02800.2); Has 112844 Blast hits to 111359 proteins in 3847 species: Archae - 89; Bacteria - 13219; Metazoa - 41419; Fungi - 9318; Plants - 32676; Viruses - 341; Other Eukaryotes - 15782 (source: NCBI BLink). & (gnl|cdd|36401 : 357.0) no description available & (q8l4h4|nork_medtr : 216.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 179.0) no description available & (reliability: 884.0) & (original description: Putative BIK1, Description = Protein kinase 2B, chloroplastic, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf10157_165338-171494' '(at2g07180 : 564.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G01020.1). & (gnl|cdd|36401 : 377.0) no description available & (q8lkz1|nork_pea : 214.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|88314 : 167.0) no description available & (reliability: 1128.0) & (original description: Putative At2g07180, Description = Protein kinase domain-containing protein, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf10274_25687-31001' '(at2g02800 : 473.0) Encodes protein kinase APK2b.; protein kinase 2B (APK2B); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase 2A (TAIR:AT1G14370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 382.0) no description available & (q8l4h4|nork_medtr : 219.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 174.0) no description available & (reliability: 946.0) & (original description: Putative APK2B, Description = Protein kinase 2B, chloroplastic, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf10274_25753-28870' '(at2g02800 : 204.0) Encodes protein kinase APK2b.; protein kinase 2B (APK2B); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase 2A (TAIR:AT1G14370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 147.0) no description available & (gnl|cdd|87344 : 87.1) no description available & (reliability: 408.0) & (original description: Putative BIK1, Description = Protein kinase APK1A, chloroplastic, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf10970_104970-109761' '(at5g47070 : 424.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G17660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 375.0) no description available & (q8l4h4|nork_medtr : 219.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 171.0) no description available & (reliability: 848.0) & (original description: Putative At5g47070, Description = Probable receptor-like protein kinase At5g47070, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf11199_11967-16229' '(at2g05940 : 488.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G35580.1); Has 113425 Blast hits to 112177 proteins in 3510 species: Archae - 99; Bacteria - 13130; Metazoa - 41743; Fungi - 9248; Plants - 32526; Viruses - 361; Other Eukaryotes - 16318 (source: NCBI BLink). & (gnl|cdd|36401 : 384.0) no description available & (q8l4h4|nork_medtr : 225.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 169.0) no description available & (reliability: 976.0) & (original description: Putative At1g72540, Description = Putative receptor-like protein kinase At1g72540, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf11254_87412-93492' '(at5g02800 : 556.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 115691 Blast hits to 114176 proteins in 4291 species: Archae - 101; Bacteria - 13423; Metazoa - 42779; Fungi - 9601; Plants - 32894; Viruses - 373; Other Eukaryotes - 16520 (source: NCBI BLink). & (gnl|cdd|36401 : 396.0) no description available & (q8l4h4|nork_medtr : 239.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 181.0) no description available & (reliability: 1112.0) & (original description: Putative Sb02g044090, Description = Putative uncharacterized protein Sb02g044090, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf11774_35756-40924' '(at3g20530 : 509.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 115048 Blast hits to 113699 proteins in 4223 species: Archae - 109; Bacteria - 13576; Metazoa - 42161; Fungi - 9618; Plants - 32810; Viruses - 348; Other Eukaryotes - 16426 (source: NCBI BLink). & (gnl|cdd|36401 : 403.0) no description available & (q8lkz1|nork_pea : 239.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 176.0) no description available & (reliability: 1018.0) & (original description: Putative BnaC03g41630D, Description = BnaC03g41630D protein, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf14805_458592-468340' '(at5g15080 : 661.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G01300.1); Has 114476 Blast hits to 113108 proteins in 3886 species: Archae - 103; Bacteria - 13473; Metazoa - 41986; Fungi - 9512; Plants - 32487; Viruses - 375; Other Eukaryotes - 16540 (source: NCBI BLink). & (gnl|cdd|36401 : 408.0) no description available & (q8lkz1|nork_pea : 238.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 179.0) no description available & (reliability: 1322.0) & (original description: Putative NAK, Description = Protein kinase APK1B, chloroplast, putative, PFAM = PF07714)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf15953_9412-17664' '(at5g02800 : 529.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 115691 Blast hits to 114176 proteins in 4291 species: Archae - 101; Bacteria - 13423; Metazoa - 42779; Fungi - 9601; Plants - 32894; Viruses - 373; Other Eukaryotes - 16520 (source: NCBI BLink). & (gnl|cdd|36401 : 413.0) no description available & (o24585|cri4_maize : 225.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 183.0) no description available & (reliability: 1058.0) & (original description: Putative CDL1, Description = Serine/threonine-protein kinase CDL1, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf17635_247940-252540' '(at3g07070 : 524.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G24790.1); Has 117663 Blast hits to 116291 proteins in 4377 species: Archae - 107; Bacteria - 13587; Metazoa - 43815; Fungi - 9836; Plants - 33095; Viruses - 347; Other Eukaryotes - 16876 (source: NCBI BLink). & (gnl|cdd|36401 : 393.0) no description available & (q8l4h4|nork_medtr : 231.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 183.0) no description available & (reliability: 1048.0) & (original description: Putative At3g07070, Description = Serine/threonine-protein kinase At3g07070, PFAM = PF00069)' T '29.4.1.57' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII' 'niben101scf19533_69006-74194' '(at2g02800 : 582.0) Encodes protein kinase APK2b.; protein kinase 2B (APK2B); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase 2A (TAIR:AT1G14370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 396.0) no description available & (q8l4h4|nork_medtr : 227.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 179.0) no description available & (reliability: 1164.0) & (original description: Putative APK2B, Description = Protein kinase 2B, chloroplastic, PFAM = PF07714)' T '29.4.1.58' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VIII' 'nbv0.3scaffold34100_1386-15301' '(at3g59350 : 590.0) Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G43230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 382.0) no description available & (q8l4h4|nork_medtr : 213.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 168.0) no description available & (reliability: 1180.0) & (original description: Putative PTI13, Description = PTI1-like tyrosine-protein kinase 3, PFAM = PF07714)' T '29.4.1.58' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VIII' 'nbv0.3scaffold62768_2378-8556' '(at3g17410 : 548.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G48210.2); Has 112711 Blast hits to 111551 proteins in 4660 species: Archae - 117; Bacteria - 13367; Metazoa - 41567; Fungi - 8923; Plants - 32528; Viruses - 331; Other Eukaryotes - 15878 (source: NCBI BLink). & (gnl|cdd|36401 : 384.0) no description available & (q8l4h4|nork_medtr : 219.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 179.0) no description available & (reliability: 1096.0) & (original description: Putative PTI1, Description = Pto-interacting protein 1, PFAM = PF07714)' T '29.4.1.58' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VIII' 'nbv0.5scaffold954_468363-476994' '(at3g59350 : 542.0) Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G43230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 316.0) no description available & (q8lpb4|pskr_dauca : 191.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 155.0) no description available & (reliability: 1084.0) & (original description: Putative PTI13, Description = PTI1-like tyrosine-protein kinase 3, PFAM = PF07714)' T '29.4.1.58' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VIII' 'niben044scf00027640ctg003_4091-8755' '(at2g41970 : 438.0) Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G59350.2); Has 104388 Blast hits to 103490 proteins in 4408 species: Archae - 91; Bacteria - 12474; Metazoa - 38816; Fungi - 7787; Plants - 30601; Viruses - 278; Other Eukaryotes - 14341 (source: NCBI BLink). & (gnl|cdd|36401 : 310.0) no description available & (o24585|cri4_maize : 192.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|88314 : 153.0) no description available & (reliability: 876.0) & (original description: Putative pk2, Description = Protein kinase 2, PFAM = PF07714)' T '29.4.1.58' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VIII' 'niben101scf00015_48837-54614' '(at2g41970 : 578.0) Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G59350.2); Has 104388 Blast hits to 103490 proteins in 4408 species: Archae - 91; Bacteria - 12474; Metazoa - 38816; Fungi - 7787; Plants - 30601; Viruses - 278; Other Eukaryotes - 14341 (source: NCBI BLink). & (gnl|cdd|36401 : 371.0) no description available & (q8l4h4|nork_medtr : 210.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 169.0) no description available & (reliability: 1156.0) & (original description: Putative pk2, Description = Protein kinase 2, PFAM = PF07714)' T '29.4.1.58' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VIII' 'niben101scf00270_313756-328931' '(at3g59350 : 598.0) Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G43230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 383.0) no description available & (q8l4h4|nork_medtr : 215.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 168.0) no description available & (reliability: 1196.0) & (original description: Putative PTI13, Description = PTI1-like tyrosine-protein kinase 3, PFAM = PF07714)' T '29.4.1.58' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VIII' 'niben101scf01066_367050-374436' '(at3g59350 : 607.0) Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G43230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 382.0) no description available & (q8l4h4|nork_medtr : 216.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|88314 : 167.0) no description available & (reliability: 1214.0) & (original description: Putative PTI13, Description = PTI1-like tyrosine-protein kinase 3, PFAM = PF07714)' T '29.4.1.58' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VIII' 'niben101scf01236_232043-238694' '(at3g17410 : 557.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G48210.2); Has 112711 Blast hits to 111551 proteins in 4660 species: Archae - 117; Bacteria - 13367; Metazoa - 41567; Fungi - 8923; Plants - 32528; Viruses - 331; Other Eukaryotes - 15878 (source: NCBI BLink). & (gnl|cdd|36401 : 378.0) no description available & (q8l4h4|nork_medtr : 216.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 174.0) no description available & (reliability: 1114.0) & (original description: Putative PTI1, Description = Pto-interacting protein 1, PFAM = PF07714)' T '29.4.1.58' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VIII' 'niben101scf01334_460172-469054' '(at3g62220 : 541.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G47060.4); Has 114745 Blast hits to 113433 proteins in 4682 species: Archae - 113; Bacteria - 13563; Metazoa - 42319; Fungi - 9347; Plants - 32428; Viruses - 387; Other Eukaryotes - 16588 (source: NCBI BLink). & (gnl|cdd|36401 : 381.0) no description available & (q8l4h4|nork_medtr : 213.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 176.0) no description available & (reliability: 1082.0) & (original description: Putative PTI1, Description = Pto-interacting protein 1, PFAM = PF07714)' T '29.4.1.58' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VIII' 'niben101scf02015_358278-362986' '(at2g41970 : 387.0) Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G59350.2); Has 104388 Blast hits to 103490 proteins in 4408 species: Archae - 91; Bacteria - 12474; Metazoa - 38816; Fungi - 7787; Plants - 30601; Viruses - 278; Other Eukaryotes - 14341 (source: NCBI BLink). & (gnl|cdd|36401 : 285.0) no description available & (q8lpb4|pskr_dauca : 186.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 143.0) no description available & (reliability: 774.0) & (original description: Putative pk2, Description = PTI1-like tyrosine-protein kinase 3, PFAM = PF07714)' T '29.4.1.58' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VIII' 'niben101scf02927_1018399-1021117' '(at2g41970 : 246.0) Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G59350.2); Has 104388 Blast hits to 103490 proteins in 4408 species: Archae - 91; Bacteria - 12474; Metazoa - 38816; Fungi - 7787; Plants - 30601; Viruses - 278; Other Eukaryotes - 14341 (source: NCBI BLink). & (gnl|cdd|36401 : 168.0) no description available & (q8lpb4|pskr_dauca : 108.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 98.3) no description available & (reliability: 492.0) & (original description: Putative pk2, Description = PTI1-like tyrosine-protein kinase 3, PFAM = PF07714)' T '29.4.1.58' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VIII' 'niben101scf05415_173260-177508' '(at2g41970 : 561.0) Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G59350.2); Has 104388 Blast hits to 103490 proteins in 4408 species: Archae - 91; Bacteria - 12474; Metazoa - 38816; Fungi - 7787; Plants - 30601; Viruses - 278; Other Eukaryotes - 14341 (source: NCBI BLink). & (gnl|cdd|36401 : 366.0) no description available & (q8l4h4|nork_medtr : 209.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 169.0) no description available & (reliability: 1122.0) & (original description: Putative pk2, Description = Protein kinase 2, PFAM = PF07714)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'nbv0.3scaffold20053_1372-12055' '(at5g65500 : 594.0) U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT2G45910.1); Has 41004 Blast hits to 40348 proteins in 1429 species: Archae - 75; Bacteria - 1512; Metazoa - 10519; Fungi - 737; Plants - 24654; Viruses - 146; Other Eukaryotes - 3361 (source: NCBI BLink). & (gnl|cdd|36401 : 160.0) no description available & (gnl|cdd|87344 : 88.7) no description available & (q8l4h4|nork_medtr : 82.8) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1188.0) & (original description: Putative PUB50, Description = Putative U-box domain-containing protein 50, PFAM = PF07714;PF04564)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'nbv0.3scaffold89910_124-3865' '(gnl|cdd|30176 : 147.0) no description available & (at2g24370 : 134.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), UspA (InterPro:IPR006016), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT4G31230.1); Has 115907 Blast hits to 112870 proteins in 4808 species: Archae - 117; Bacteria - 15040; Metazoa - 41733; Fungi - 9339; Plants - 32152; Viruses - 245; Other Eukaryotes - 17281 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative At1g16760, Description = Protein kinase protein with adenine nucleotide alpha hydrolases-like domain, PFAM = PF00582)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'nbv0.5scaffold145_759307-767265' '(at2g24370 : 736.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), UspA (InterPro:IPR006016), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT4G31230.1); Has 115907 Blast hits to 112870 proteins in 4808 species: Archae - 117; Bacteria - 15040; Metazoa - 41733; Fungi - 9339; Plants - 32152; Viruses - 245; Other Eukaryotes - 17281 (source: NCBI BLink). & (gnl|cdd|36401 : 290.0) no description available & (gnl|cdd|30176 : 176.0) no description available & (q8lpb4|pskr_dauca : 163.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1472.0) & (original description: Putative stk1, Description = U-box domain-containing protein 35, PFAM = PF00069;PF00582)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'nbv0.5scaffold628_519326-524663' '(at4g31230 : 536.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), UspA (InterPro:IPR006016), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT2G24370.1); Has 112628 Blast hits to 110541 proteins in 4515 species: Archae - 108; Bacteria - 14372; Metazoa - 40671; Fungi - 8662; Plants - 31951; Viruses - 236; Other Eukaryotes - 16628 (source: NCBI BLink). & (gnl|cdd|36401 : 300.0) no description available & (q8l4h4|nork_medtr : 169.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 164.0) no description available & (reliability: 1072.0) & (original description: Putative stk1, Description = U-box domain-containing protein 35, PFAM = PF00069)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'nbv0.5scaffold813_458428-468938' '(at2g45910 : 440.0) U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT3G49060.1); Has 126911 Blast hits to 124541 proteins in 4743 species: Archae - 223; Bacteria - 14733; Metazoa - 47002; Fungi - 10910; Plants - 34737; Viruses - 429; Other Eukaryotes - 18877 (source: NCBI BLink). & (gnl|cdd|36401 : 240.0) no description available & (gnl|cdd|29142 : 138.0) no description available & (q8l4h4|nork_medtr : 127.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 880.0) & (original description: Putative Sb02g012390, Description = Putative uncharacterized protein Sb02g012390, PFAM = PF07714;PF04564)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'nbv0.5scaffold2508_232505-248192' '(at2g24370 : 840.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), UspA (InterPro:IPR006016), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT4G31230.1); Has 115907 Blast hits to 112870 proteins in 4808 species: Archae - 117; Bacteria - 15040; Metazoa - 41733; Fungi - 9339; Plants - 32152; Viruses - 245; Other Eukaryotes - 17281 (source: NCBI BLink). & (gnl|cdd|36401 : 292.0) no description available & (gnl|cdd|30176 : 173.0) no description available & (q8lpb4|pskr_dauca : 169.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1680.0) & (original description: Putative stk1, Description = Serine threonine kinase, PFAM = PF00582;PF00069)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'niben044ctg26155340_1-5301' '(at2g45910 : 395.0) U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT3G49060.1); Has 126911 Blast hits to 124541 proteins in 4743 species: Archae - 223; Bacteria - 14733; Metazoa - 47002; Fungi - 10910; Plants - 34737; Viruses - 429; Other Eukaryotes - 18877 (source: NCBI BLink). & (gnl|cdd|36401 : 240.0) no description available & (gnl|cdd|29142 : 138.0) no description available & (q8l4h4|nork_medtr : 128.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 790.0) & (original description: Putative glysoja_010553, Description = U-box domain-containing protein 33, PFAM = PF07714;PF04564)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'niben044scf00008834ctg034_1-4256' '(at2g24370 : 354.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), UspA (InterPro:IPR006016), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT4G31230.1); Has 115907 Blast hits to 112870 proteins in 4808 species: Archae - 117; Bacteria - 15040; Metazoa - 41733; Fungi - 9339; Plants - 32152; Viruses - 245; Other Eukaryotes - 17281 (source: NCBI BLink). & (gnl|cdd|30176 : 120.0) no description available & (reliability: 708.0) & (original description: Putative stk1, Description = U-box domain-containing protein 35, PFAM = )' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'niben044scf00015801ctg002_490-6025' '(at2g24370 : 739.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), UspA (InterPro:IPR006016), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT4G31230.1); Has 115907 Blast hits to 112870 proteins in 4808 species: Archae - 117; Bacteria - 15040; Metazoa - 41733; Fungi - 9339; Plants - 32152; Viruses - 245; Other Eukaryotes - 17281 (source: NCBI BLink). & (gnl|cdd|36401 : 270.0) no description available & (q8lpb4|pskr_dauca : 155.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 152.0) no description available & (reliability: 1478.0) & (original description: Putative stk1, Description = U-box domain-containing protein 35, PFAM = PF07714)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'niben044scf00015801ctg002_501-6368' '(at2g24370 : 754.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), UspA (InterPro:IPR006016), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT4G31230.1); Has 115907 Blast hits to 112870 proteins in 4808 species: Archae - 117; Bacteria - 15040; Metazoa - 41733; Fungi - 9339; Plants - 32152; Viruses - 245; Other Eukaryotes - 17281 (source: NCBI BLink). & (gnl|cdd|36401 : 270.0) no description available & (q8lpb4|pskr_dauca : 157.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 152.0) no description available & (reliability: 1508.0) & (original description: Putative stk1, Description = U-box domain-containing protein 35, PFAM = PF07714)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'niben044scf00019704ctg000_1-3781' '(at2g24370 : 686.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), UspA (InterPro:IPR006016), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT4G31230.1); Has 115907 Blast hits to 112870 proteins in 4808 species: Archae - 117; Bacteria - 15040; Metazoa - 41733; Fungi - 9339; Plants - 32152; Viruses - 245; Other Eukaryotes - 17281 (source: NCBI BLink). & (gnl|cdd|36401 : 291.0) no description available & (q8lpb4|pskr_dauca : 172.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 167.0) no description available & (reliability: 1372.0) & (original description: Putative lyce1, Description = Lycopene epsilon cyclase1, PFAM = PF00069)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'niben044scf00021785ctg015_25827-32428' '(at4g25160 : 734.0) U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination, response to stress; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), U box domain (InterPro:IPR003613), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT5G61550.1); Has 118360 Blast hits to 115683 proteins in 4597 species: Archae - 135; Bacteria - 13482; Metazoa - 43605; Fungi - 9605; Plants - 33456; Viruses - 341; Other Eukaryotes - 17736 (source: NCBI BLink). & (gnl|cdd|36401 : 263.0) no description available & (o24585|cri4_maize : 167.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 162.0) no description available & (reliability: 1468.0) & (original description: Putative PUB35, Description = U-box domain-containing protein 35, PFAM = PF04564;PF07714)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'niben044scf00031842ctg005_6702-13488' '(at5g12000 : 705.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, response to stress; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase family protein (TAIR:AT5G26150.1); Has 120834 Blast hits to 118661 proteins in 4690 species: Archae - 119; Bacteria - 15139; Metazoa - 44037; Fungi - 10386; Plants - 32764; Viruses - 275; Other Eukaryotes - 18114 (source: NCBI BLink). & (gnl|cdd|36401 : 308.0) no description available & (q8l4h4|nork_medtr : 179.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 165.0) no description available & (reliability: 1410.0) & (original description: Putative lyce1, Description = Lycopene epsilon cyclase1, PFAM = PF00069)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'niben044scf00055094ctg003_1-2447' '(gnl|cdd|36401 : 195.0) no description available & (at1g79620 : 134.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G49760.1); Has 173131 Blast hits to 132948 proteins in 4769 species: Archae - 163; Bacteria - 18653; Metazoa - 51943; Fungi - 10632; Plants - 70309; Viruses - 438; Other Eukaryotes - 20993 (source: NCBI BLink). & (q8l4h4|nork_medtr : 117.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 109.0) no description available & (reliability: 254.0) & (original description: Putative At3g26700, Description = Putative leucine-rich repeat receptor-like protein kinase, PFAM = PF07714)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'niben044scf00061212ctg003_1-6908' '(at4g25160 : 744.0) U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination, response to stress; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), U box domain (InterPro:IPR003613), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT5G61550.1); Has 118360 Blast hits to 115683 proteins in 4597 species: Archae - 135; Bacteria - 13482; Metazoa - 43605; Fungi - 9605; Plants - 33456; Viruses - 341; Other Eukaryotes - 17736 (source: NCBI BLink). & (gnl|cdd|36401 : 268.0) no description available & (o24585|cri4_maize : 169.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 157.0) no description available & (reliability: 1488.0) & (original description: Putative PUB35, Description = U-box domain-containing protein 35, PFAM = PF04564;PF07714)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'niben101scf00017_43721-51448' '(at2g24370 : 735.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), UspA (InterPro:IPR006016), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT4G31230.1); Has 115907 Blast hits to 112870 proteins in 4808 species: Archae - 117; Bacteria - 15040; Metazoa - 41733; Fungi - 9339; Plants - 32152; Viruses - 245; Other Eukaryotes - 17281 (source: NCBI BLink). & (gnl|cdd|36401 : 300.0) no description available & (gnl|cdd|30176 : 174.0) no description available & (q8l4h4|nork_medtr : 170.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1470.0) & (original description: Putative stk1, Description = Serine threonine kinase, PFAM = PF00069;PF00582)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'niben101scf00138_3902-14014' '(at2g24370 : 184.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), UspA (InterPro:IPR006016), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT4G31230.1); Has 115907 Blast hits to 112870 proteins in 4808 species: Archae - 117; Bacteria - 15040; Metazoa - 41733; Fungi - 9339; Plants - 32152; Viruses - 245; Other Eukaryotes - 17281 (source: NCBI BLink). & (gnl|cdd|30176 : 148.0) no description available & (reliability: 368.0) & (original description: Putative PGSC0003DMG400020402, Description = U-box domain-containing protein 34, PFAM = PF00582)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'niben101scf00478_30096-40804' '(at2g24370 : 793.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), UspA (InterPro:IPR006016), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT4G31230.1); Has 115907 Blast hits to 112870 proteins in 4808 species: Archae - 117; Bacteria - 15040; Metazoa - 41733; Fungi - 9339; Plants - 32152; Viruses - 245; Other Eukaryotes - 17281 (source: NCBI BLink). & (gnl|cdd|36401 : 302.0) no description available & (q8l4h4|nork_medtr : 171.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 169.0) no description available & (reliability: 1586.0) & (original description: Putative stk1, Description = U-box domain-containing protein 35, PFAM = PF00069;PF00582)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'niben101scf00595_343775-356026' '(at2g45910 : 553.0) U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT3G49060.1); Has 126911 Blast hits to 124541 proteins in 4743 species: Archae - 223; Bacteria - 14733; Metazoa - 47002; Fungi - 10910; Plants - 34737; Viruses - 429; Other Eukaryotes - 18877 (source: NCBI BLink). & (gnl|cdd|36401 : 221.0) no description available & (gnl|cdd|87344 : 145.0) no description available & (q8lpb4|pskr_dauca : 114.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1106.0) & (original description: Putative BnaA06g16210D, Description = BnaA06g16210D protein, PFAM = PF04564;PF07714)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'niben101scf00611_955174-964177' '(at5g57035 : 741.0) U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination, response to stress; LOCATED IN: ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT2G19410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 263.0) no description available & (gnl|cdd|29142 : 162.0) no description available & (q8lpb4|pskr_dauca : 147.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1344.0) & (original description: Putative PUB34, Description = U-box domain-containing protein 34, PFAM = PF07714;PF04564;PF00582)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'niben101scf00747_203009-210339' '(at5g26150 : 472.0) protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT5G12000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 300.0) no description available & (q8l4h4|nork_medtr : 167.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 167.0) no description available & (reliability: 944.0) & (original description: Putative stk1, Description = U-box domain-containing protein 35, PFAM = PF00582;PF00069)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'niben101scf02081_170-9568' '(at2g45910 : 817.0) U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT3G49060.1); Has 126911 Blast hits to 124541 proteins in 4743 species: Archae - 223; Bacteria - 14733; Metazoa - 47002; Fungi - 10910; Plants - 34737; Viruses - 429; Other Eukaryotes - 18877 (source: NCBI BLink). & (gnl|cdd|36401 : 266.0) no description available & (gnl|cdd|29142 : 160.0) no description available & (q8l4h4|nork_medtr : 152.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1634.0) & (original description: Putative PUB33, Description = U-box domain-containing protein 33, PFAM = PF00069;PF04564)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'niben101scf02752_781-4583' '(at3g26700 : 303.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G79620.1); Has 92372 Blast hits to 91537 proteins in 3916 species: Archae - 61; Bacteria - 9295; Metazoa - 35380; Fungi - 6696; Plants - 28617; Viruses - 208; Other Eukaryotes - 12115 (source: NCBI BLink). & (gnl|cdd|36401 : 285.0) no description available & (q8l4h4|nork_medtr : 185.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 143.0) no description available & (reliability: 606.0) & (original description: Putative Os05g0371600, Description = Os05g0371600 protein, PFAM = PF07714)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'niben101scf02827_576854-584812' '(at2g24370 : 768.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), UspA (InterPro:IPR006016), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT4G31230.1); Has 115907 Blast hits to 112870 proteins in 4808 species: Archae - 117; Bacteria - 15040; Metazoa - 41733; Fungi - 9339; Plants - 32152; Viruses - 245; Other Eukaryotes - 17281 (source: NCBI BLink). & (gnl|cdd|36401 : 289.0) no description available & (gnl|cdd|30176 : 177.0) no description available & (q8lpb4|pskr_dauca : 163.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1536.0) & (original description: Putative stk1, Description = Serine threonine kinase, PFAM = PF00069;PF00582)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'niben101scf03241_183942-194968' '(at5g65500 : 603.0) U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT2G45910.1); Has 41004 Blast hits to 40348 proteins in 1429 species: Archae - 75; Bacteria - 1512; Metazoa - 10519; Fungi - 737; Plants - 24654; Viruses - 146; Other Eukaryotes - 3361 (source: NCBI BLink). & (gnl|cdd|36401 : 157.0) no description available & (gnl|cdd|47808 : 83.0) no description available & (reliability: 1206.0) & (original description: Putative PUB50, Description = Putative U-box domain-containing protein 50, PFAM = PF07714;PF04564)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'niben101scf04617_62343-69654' '(at3g26700 : 464.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G79620.1); Has 92372 Blast hits to 91537 proteins in 3916 species: Archae - 61; Bacteria - 9295; Metazoa - 35380; Fungi - 6696; Plants - 28617; Viruses - 208; Other Eukaryotes - 12115 (source: NCBI BLink). & (gnl|cdd|36401 : 284.0) no description available & (q8lkz1|nork_pea : 197.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|88314 : 152.0) no description available & (reliability: 928.0) & (original description: Putative ptk, Description = Protein kinase-like protein, PFAM = PF07714)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'niben101scf06277_482444-487711' '(at2g24370 : 639.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), UspA (InterPro:IPR006016), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT4G31230.1); Has 115907 Blast hits to 112870 proteins in 4808 species: Archae - 117; Bacteria - 15040; Metazoa - 41733; Fungi - 9339; Plants - 32152; Viruses - 245; Other Eukaryotes - 17281 (source: NCBI BLink). & (gnl|cdd|36401 : 302.0) no description available & (q8l4h4|nork_medtr : 169.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 164.0) no description available & (reliability: 1278.0) & (original description: Putative lyce1, Description = Lycopene epsilon cyclase1, PFAM = PF00069)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'niben101scf08706_250102-257613' '(at4g25160 : 711.0) U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination, response to stress; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), U box domain (InterPro:IPR003613), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT5G61550.1); Has 118360 Blast hits to 115683 proteins in 4597 species: Archae - 135; Bacteria - 13482; Metazoa - 43605; Fungi - 9605; Plants - 33456; Viruses - 341; Other Eukaryotes - 17736 (source: NCBI BLink). & (gnl|cdd|36401 : 271.0) no description available & (o24585|cri4_maize : 168.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 160.0) no description available & (reliability: 1422.0) & (original description: Putative PUB35, Description = U-box domain-containing protein 35, PFAM = PF07714;PF04564)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'niben101scf09130_534115-541379' '(at5g12000 : 719.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, response to stress; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase family protein (TAIR:AT5G26150.1); Has 120834 Blast hits to 118661 proteins in 4690 species: Archae - 119; Bacteria - 15139; Metazoa - 44037; Fungi - 10386; Plants - 32764; Viruses - 275; Other Eukaryotes - 18114 (source: NCBI BLink). & (gnl|cdd|36401 : 303.0) no description available & (q8l4h4|nork_medtr : 171.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 162.0) no description available & (reliability: 1438.0) & (original description: Putative stk1, Description = Serine threonine kinase, PFAM = PF07714;PF00582)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'niben101scf10241_388617-395123' '(at5g12000 : 688.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, response to stress; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase family protein (TAIR:AT5G26150.1); Has 120834 Blast hits to 118661 proteins in 4690 species: Archae - 119; Bacteria - 15139; Metazoa - 44037; Fungi - 10386; Plants - 32764; Viruses - 275; Other Eukaryotes - 18114 (source: NCBI BLink). & (gnl|cdd|36401 : 302.0) no description available & (q8l4h4|nork_medtr : 169.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 168.0) no description available & (reliability: 1376.0) & (original description: Putative lyce1, Description = Lycopene epsilon cyclase1, PFAM = PF00069)' T '29.4.1.59' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX' 'niben101scf10241_388623-395836' '(at5g12000 : 725.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, response to stress; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase family protein (TAIR:AT5G26150.1); Has 120834 Blast hits to 118661 proteins in 4690 species: Archae - 119; Bacteria - 15139; Metazoa - 44037; Fungi - 10386; Plants - 32764; Viruses - 275; Other Eukaryotes - 18114 (source: NCBI BLink). & (gnl|cdd|36401 : 302.0) no description available & (q8l4h4|nork_medtr : 169.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 168.0) no description available & (reliability: 1450.0) & (original description: Putative stk1, Description = Serine threonine kinase, PFAM = PF00582;PF00069)' T '29.4.1.60' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase X' '' '' '29.4.1.61' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase X' 'niben044scf00014105ctg002_1-3803' '(at2g45590 : 499.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G25390.1); Has 91863 Blast hits to 73683 proteins in 3539 species: Archae - 59; Bacteria - 6920; Metazoa - 25471; Fungi - 5140; Plants - 45446; Viruses - 121; Other Eukaryotes - 8706 (source: NCBI BLink). & (gnl|cdd|36401 : 214.0) no description available & (gnl|cdd|47549 : 125.0) no description available & (p17801|kpro_maize : 124.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 998.0) & (original description: Putative At2g45590, Description = Receptor-like serine/threonine-protein kinase At2g45590, PFAM = PF07714;PF00069)' T '29.4.1.61' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase X' 'niben044scf00060057ctg000_3705-7849' '(at2g45590 : 358.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G25390.1); Has 91863 Blast hits to 73683 proteins in 3539 species: Archae - 59; Bacteria - 6920; Metazoa - 25471; Fungi - 5140; Plants - 45446; Viruses - 121; Other Eukaryotes - 8706 (source: NCBI BLink). & (gnl|cdd|36401 : 129.0) no description available & (p93194|rpk1_iponi : 87.8) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|84488 : 80.7) no description available & (reliability: 716.0) & (original description: Putative At4g25390, Description = Receptor-like serine/threonine-protein kinase At4g25390, PFAM = PF00069;PF00069)' T '29.4.1.61' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase X' 'niben101scf00576_313444-318957' '(at2g25220 : 475.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G32000.1). & (gnl|cdd|36401 : 345.0) no description available & (q8lkz1|nork_pea : 211.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 164.0) no description available & (reliability: 950.0) & (original description: Putative At1g80640, Description = Probable receptor-like protein kinase At1g80640, PFAM = PF07714)' T '29.4.1.61' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase X' 'niben101scf02033_20967-25024' '(at2g45590 : 473.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G25390.1); Has 91863 Blast hits to 73683 proteins in 3539 species: Archae - 59; Bacteria - 6920; Metazoa - 25471; Fungi - 5140; Plants - 45446; Viruses - 121; Other Eukaryotes - 8706 (source: NCBI BLink). & (gnl|cdd|36401 : 223.0) no description available & (gnl|cdd|47549 : 126.0) no description available & (p17801|kpro_maize : 123.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 946.0) & (original description: Putative At2g45590, Description = Receptor-like serine/threonine-protein kinase At2g45590, PFAM = PF07714;PF00069)' T '29.4.1.61' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase X' 'niben101scf02497_916212-920265' '(at2g45590 : 456.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G25390.1); Has 91863 Blast hits to 73683 proteins in 3539 species: Archae - 59; Bacteria - 6920; Metazoa - 25471; Fungi - 5140; Plants - 45446; Viruses - 121; Other Eukaryotes - 8706 (source: NCBI BLink). & (gnl|cdd|36401 : 204.0) no description available & (q8lpb4|pskr_dauca : 111.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 106.0) no description available & (reliability: 912.0) & (original description: Putative At2g45590, Description = Receptor-like serine/threonine-protein kinase At2g45590, PFAM = PF00069;PF00069)' T '29.4.1.61' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase X' 'niben101scf02955_419242-423305' '(at2g45590 : 439.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G25390.1); Has 91863 Blast hits to 73683 proteins in 3539 species: Archae - 59; Bacteria - 6920; Metazoa - 25471; Fungi - 5140; Plants - 45446; Viruses - 121; Other Eukaryotes - 8706 (source: NCBI BLink). & (gnl|cdd|36401 : 170.0) no description available & (gnl|cdd|47549 : 102.0) no description available & (p17801|kpro_maize : 92.8) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 878.0) & (original description: Putative BnaA03g13010D, Description = BnaA03g13010D protein, PFAM = PF07714;PF00069)' T '29.4.1.61' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase X' 'niben101scf03561_29822-35703' '(at1g80870 : 636.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G51770.1); Has 92712 Blast hits to 76168 proteins in 3269 species: Archae - 56; Bacteria - 7291; Metazoa - 26312; Fungi - 5337; Plants - 43631; Viruses - 173; Other Eukaryotes - 9912 (source: NCBI BLink). & (gnl|cdd|36401 : 221.0) no description available & (p17801|kpro_maize : 144.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 110.0) no description available & (reliability: 1272.0) & (original description: Putative At1g80870, Description = Putative receptor-like protein kinase At1g80870, PFAM = PF00069;PF00069)' T '29.4.1.61' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase X' 'niben101scf07593_122134-128322' '(at2g25220 : 466.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G32000.1). & (gnl|cdd|36401 : 360.0) no description available & (q8lkz1|nork_pea : 196.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 183.0) no description available & (reliability: 932.0) & (original description: Putative At4g32000, Description = Protein kinase family protein, PFAM = PF00069)' T '29.4.1.61' 'protein.postranslational modification.kinase.receptor like cytoplasmatic kinase X' 'niben101scf08516_24853-38440' '(at2g25220 : 473.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G32000.1). & (gnl|cdd|36401 : 332.0) no description available & (q8lkz1|nork_pea : 204.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 161.0) no description available & (reliability: 946.0) & (original description: Putative At1g80640, Description = Probable receptor-like protein kinase At1g80640, PFAM = PF07714)' T '29.5' 'protein.degradation' 'nbv0.3scaffold132_143634-153612' '(at5g51540 : 631.0) Zincin-like metalloproteases family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast thylakoid membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Peptidase M3A/M3B, thimet/oligopeptidase F (InterPro:IPR001567); BEST Arabidopsis thaliana protein match is: Zincin-like metalloproteases family protein (TAIR:AT1G67690.1); Has 5499 Blast hits to 5482 proteins in 1556 species: Archae - 6; Bacteria - 3417; Metazoa - 330; Fungi - 489; Plants - 134; Viruses - 0; Other Eukaryotes - 1123 (source: NCBI BLink). & (gnl|cdd|37301 : 497.0) no description available & (gnl|cdd|30687 : 312.0) no description available & (reliability: 1262.0) & (original description: Putative mipep, Description = Mitochondrial intermediate peptidase, PFAM = PF01432)' T '29.5' 'protein.degradation' 'nbv0.3scaffold658_34843-39182' '(at5g49980 : 865.0) auxin F-box protein 5 (AFB5); CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT4G24390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37158 : 169.0) no description available & (reliability: 1730.0) & (original description: Putative At5g49980, Description = Transport inhibitor response 1-like protein, PFAM = )' T '29.5' 'protein.degradation' 'nbv0.3scaffold697_181-10883' '(at5g13520 : 895.0) peptidase M1 family protein; FUNCTIONS IN: metallopeptidase activity, binding, zinc ion binding; INVOLVED IN: proteolysis, leukotriene biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782), Peptidase M1, leukotriene A4 hydrolase, aminopeptidase C-terminal (InterPro:IPR015211), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36265 : 623.0) no description available & (gnl|cdd|30656 : 218.0) no description available & (reliability: 1790.0) & (original description: Putative LKHA4, Description = Leukotriene A-4 hydrolase homolog, PFAM = PF09127;PF01433)' T '29.5' 'protein.degradation' 'nbv0.3scaffold1570_81290-88527' '(at4g04210 : 312.0) Arabidopsis thaliana CDC48-interacting UBX-domain protein (PUX4); plant UBX domain containing protein 4 (PUX4); INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012), SEP domain (InterPro:IPR012989); BEST Arabidopsis thaliana protein match is: plant UBX domain-containing protein 3 (TAIR:AT4G22150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37297 : 279.0) no description available & (gnl|cdd|47854 : 111.0) no description available & (reliability: 624.0) & (original description: Putative PUX3, Description = CDC48-interacting UBX-domain protein 3, PFAM = PF14555;PF00789;PF08059)' T '29.5' 'protein.degradation' 'nbv0.3scaffold2361_67668-75264' '(at1g79210 : 417.0) N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; FUNCTIONS IN: endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: defense response to bacterium, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: proteasome subunit PAB1 (TAIR:AT1G16470.2); Has 6770 Blast hits to 6769 proteins in 496 species: Archae - 887; Bacteria - 41; Metazoa - 2415; Fungi - 1555; Plants - 857; Viruses - 0; Other Eukaryotes - 1015 (source: NCBI BLink). & (q9lsu2|psa2_orysa : 406.0) Proteasome subunit alpha type 2 (EC 3.4.25.1) (20S proteasome alpha subunit B) (20S proteasome subunit alpha-2) - Oryza sativa (Rice) & (gnl|cdd|48448 : 398.0) no description available & (gnl|cdd|35402 : 368.0) no description available & (reliability: 834.0) & (original description: Putative pre8, Description = Probable proteasome subunit alpha type-2, PFAM = PF10584;PF00227)' T '29.5' 'protein.degradation' 'nbv0.3scaffold6875_19966-27124' '(at1g67420 : 340.0) Zn-dependent exopeptidases superfamily protein; FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M28 (InterPro:IPR007484); BEST Arabidopsis thaliana protein match is: Zn-dependent exopeptidases superfamily protein (TAIR:AT5G20660.1). & (gnl|cdd|37405 : 153.0) no description available & (gnl|cdd|86644 : 91.5) no description available & (reliability: 680.0) & (original description: Putative At1g67420, Description = Os07g0295800 protein, PFAM = PF04389)' T '29.5' 'protein.degradation' 'nbv0.3scaffold9623_30344-41277' '(at5g13520 : 752.0) peptidase M1 family protein; FUNCTIONS IN: metallopeptidase activity, binding, zinc ion binding; INVOLVED IN: proteolysis, leukotriene biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782), Peptidase M1, leukotriene A4 hydrolase, aminopeptidase C-terminal (InterPro:IPR015211), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36265 : 527.0) no description available & (gnl|cdd|30656 : 217.0) no description available & (reliability: 1504.0) & (original description: Putative ape2, Description = LTA-4 hydrolase, PFAM = PF01433)' T '29.5' 'protein.degradation' 'nbv0.3scaffold14066_21851-35969' '(at5g24260 : 1010.0) prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9B, dipeptidylpeptidase IV N-terminal (InterPro:IPR002469); BEST Arabidopsis thaliana protein match is: acylaminoacyl-peptidase-related (TAIR:AT4G14570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37492 : 707.0) no description available & (gnl|cdd|85131 : 266.0) no description available & (reliability: 2020.0) & (original description: Putative DPP4, Description = Dipeptidyl-peptidase 4, PFAM = PF00930;PF00326)' T '29.5' 'protein.degradation' 'nbv0.3scaffold14204_857-13353' '(at1g67690 : 416.0) Zincin-like metalloproteases family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M3A/M3B, thimet/oligopeptidase F (InterPro:IPR001567); BEST Arabidopsis thaliana protein match is: Zincin-like metalloproteases family protein (TAIR:AT5G51540.1); Has 5194 Blast hits to 5176 proteins in 1382 species: Archae - 6; Bacteria - 3154; Metazoa - 337; Fungi - 406; Plants - 147; Viruses - 0; Other Eukaryotes - 1144 (source: NCBI BLink). & (gnl|cdd|37300 : 319.0) no description available & (gnl|cdd|30687 : 236.0) no description available & (reliability: 832.0) & (original description: Putative nln, Description = Thimet oligopeptidase, PFAM = PF01432)' T '29.5' 'protein.degradation' 'nbv0.3scaffold14204_5453-34640' '(at1g67690 : 315.0) Zincin-like metalloproteases family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M3A/M3B, thimet/oligopeptidase F (InterPro:IPR001567); BEST Arabidopsis thaliana protein match is: Zincin-like metalloproteases family protein (TAIR:AT5G51540.1); Has 5194 Blast hits to 5176 proteins in 1382 species: Archae - 6; Bacteria - 3154; Metazoa - 337; Fungi - 406; Plants - 147; Viruses - 0; Other Eukaryotes - 1144 (source: NCBI BLink). & (gnl|cdd|37300 : 313.0) no description available & (gnl|cdd|30687 : 203.0) no description available & (reliability: 630.0) & (original description: Putative thop1, Description = Neurolysin, mitochondrial, PFAM = PF07727;PF01432)' T '29.5' 'protein.degradation' 'nbv0.3scaffold14866_3239-8576' '(at5g13520 : 794.0) peptidase M1 family protein; FUNCTIONS IN: metallopeptidase activity, binding, zinc ion binding; INVOLVED IN: proteolysis, leukotriene biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782), Peptidase M1, leukotriene A4 hydrolase, aminopeptidase C-terminal (InterPro:IPR015211), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36265 : 555.0) no description available & (gnl|cdd|30656 : 207.0) no description available & (reliability: 1588.0) & (original description: Putative ape2, Description = Aminopeptidase, PFAM = PF01433;PF09127)' T '29.5' 'protein.degradation' 'nbv0.3scaffold18337_29766-33025' '(at3g10410 : 226.0) SERINE CARBOXYPEPTIDASE-LIKE 49 (SCPL49); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 48 (TAIR:AT3G45010.1); Has 3569 Blast hits to 3439 proteins in 342 species: Archae - 0; Bacteria - 147; Metazoa - 678; Fungi - 883; Plants - 1454; Viruses - 0; Other Eukaryotes - 407 (source: NCBI BLink). & (p11515|cbp3_wheat : 221.0) Serine carboxypeptidase 3 precursor (EC 3.4.16.5) (Serine carboxypeptidase III) (CP-WIII) - Triticum aestivum (Wheat) & (gnl|cdd|84781 : 159.0) no description available & (gnl|cdd|36496 : 158.0) no description available & (reliability: 410.0) & (original description: Putative 3, Description = Carboxypeptidase, PFAM = PF00450)' T '29.5' 'protein.degradation' 'nbv0.3scaffold23157_2907-23238' '(at5g49570 : 850.0) Encodes a protein that has peptide:N-glycanase activity in enzymatic assay in heterologous systems (although the activity was not detected in wild-type plants).; peptide-N-glycanase 1 (PNG1); CONTAINS InterPro DOMAIN/s: Transglutaminase-like (InterPro:IPR002931), DNA repair protein Rad4, transglutaminase-like domain (InterPro:IPR018325), Galactose-binding domain-like (InterPro:IPR008979); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7f0r1|png1_orysa : 516.0) Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase (EC 3.5.1.52) (Peptide:N-glycanase) - Oryza sativa (Rice) & (gnl|cdd|36127 : 417.0) no description available & (reliability: 1700.0) & (original description: Putative png1, Description = Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase, PFAM = PF03835)' T '29.5' 'protein.degradation' 'nbv0.3scaffold25719_2173-7545' '(at1g02170 : 511.0) Metacaspase AtMCP1b. Arginine/lysine-specific cysteine protease activity. Induces apoptosis in yeast. Contains Pfam profile PF00656: ICE-like protease (caspase) p20 domain; metacaspase 1 (AMC1); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis, induction of apoptosis; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735), Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 2 (TAIR:AT4G25110.1); Has 1179 Blast hits to 1148 proteins in 266 species: Archae - 3; Bacteria - 262; Metazoa - 3; Fungi - 268; Plants - 419; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|36759 : 429.0) no description available & (gnl|cdd|84933 : 151.0) no description available & (reliability: 1022.0) & (original description: Putative AMC1, Description = Metacaspase-1, PFAM = PF00656;PF06943)' T '29.5' 'protein.degradation' 'nbv0.3scaffold27175_16497-24504' '(at2g36670 : 556.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G22850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36553 : 225.0) no description available & (gnl|cdd|84452 : 113.0) no description available & (q6yny7|asp1_orysa : 93.2) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 1088.0) & (original description: Putative AP13, Description = Aspartic protease 13, PFAM = PF14541;PF14543)' T '29.5' 'protein.degradation' 'nbv0.3scaffold27678_2214-7405' '(at4g33490 : 436.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G44130.1). & (q6yny7|asp1_orysa : 295.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (gnl|cdd|36553 : 204.0) no description available & (reliability: 872.0) & (original description: Putative ASP1, Description = Aspartic proteinase Asp1, PFAM = PF14541;PF14543)' T '29.5' 'protein.degradation' 'nbv0.3scaffold30530_459-24405' '(at4g20310 : 390.0) Peptidase M50 family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M50 (InterPro:IPR008915); Has 156 Blast hits to 154 proteins in 70 species: Archae - 19; Bacteria - 0; Metazoa - 104; Fungi - 2; Plants - 26; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|38132 : 253.0) no description available & (reliability: 780.0) & (original description: Putative S2P, Description = Membrane-bound transcription factor site-2 protease homolog, PFAM = PF02163)' T '29.5' 'protein.degradation' 'nbv0.3scaffold32174_5997-23750' '(at5g49570 : 793.0) Encodes a protein that has peptide:N-glycanase activity in enzymatic assay in heterologous systems (although the activity was not detected in wild-type plants).; peptide-N-glycanase 1 (PNG1); CONTAINS InterPro DOMAIN/s: Transglutaminase-like (InterPro:IPR002931), DNA repair protein Rad4, transglutaminase-like domain (InterPro:IPR018325), Galactose-binding domain-like (InterPro:IPR008979); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7f0r1|png1_orysa : 479.0) Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase (EC 3.5.1.52) (Peptide:N-glycanase) - Oryza sativa (Rice) & (gnl|cdd|36127 : 407.0) no description available & (reliability: 1586.0) & (original description: Putative PNG1, Description = Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase, PFAM = PF03835)' T '29.5' 'protein.degradation' 'nbv0.3scaffold33396_1-5695' '(at1g71696 : 358.0) Encodes a Putative Zn2+ carboxypeptidase, 4 splice variants have been identified but not characterized for different functions and/or expression patterns.SOL1 isolated as a suppressor of root- specific overexpression of CLE19, a clavata3 like gene. sol1 partially suppresses the short root phenotype caused by CLE19 overexpression.; SUPPRESSOR OF LLP1 1 (SOL1); FUNCTIONS IN: metallocarboxypeptidase activity, carboxypeptidase activity, zinc ion binding; INVOLVED IN: regulation of root meristem growth; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Carboxypeptidase-like, regulatory domain (InterPro:IPR008969), Peptidase M14, carboxypeptidase A (InterPro:IPR000834), Carboxypeptidase, regulatory domain (InterPro:IPR014766); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37860 : 246.0) no description available & (gnl|cdd|84641 : 104.0) no description available & (reliability: 716.0) & (original description: Putative Os06g0144600, Description = Os06g0144600 protein, PFAM = PF00246)' T '29.5' 'protein.degradation' 'nbv0.3scaffold33726_55-7608' '(at1g56700 : 325.0) Peptidase C15, pyroglutamyl peptidase I-like; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C15, pyroglutamyl peptidase I (InterPro:IPR000816), Peptidase C15, pyroglutamyl peptidase I-like (InterPro:IPR016125); BEST Arabidopsis thaliana protein match is: Peptidase C15, pyroglutamyl peptidase I-like (TAIR:AT1G23440.1); Has 1875 Blast hits to 1874 proteins in 806 species: Archae - 109; Bacteria - 1466; Metazoa - 106; Fungi - 18; Plants - 100; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|39952 : 154.0) no description available & (gnl|cdd|29606 : 147.0) no description available & (reliability: 650.0) & (original description: Putative Sb02g040830, Description = Putative uncharacterized protein Sb02g040830, PFAM = PF01470)' T '29.5' 'protein.degradation' 'nbv0.3scaffold35291_15781-20558' '(at1g06870 : 382.0) Peptidase S24/S26A/S26B/S26C family protein; FUNCTIONS IN: serine-type peptidase activity, peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (InterPro:IPR011056), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927), Peptidase S26A, signal peptidase I, conserved site (InterPro:IPR019758), Peptidase S26, conserved region (InterPro:IPR019533), Peptidase S26A, signal peptidase I (InterPro:IPR000223), Peptidase S26A, signal peptidase I, serine active site (InterPro:IPR019756); BEST Arabidopsis thaliana protein match is: thylakoid processing peptide (TAIR:AT2G30440.1); Has 9578 Blast hits to 9341 proteins in 2371 species: Archae - 0; Bacteria - 7160; Metazoa - 214; Fungi - 105; Plants - 244; Viruses - 0; Other Eukaryotes - 1855 (source: NCBI BLink). & (gnl|cdd|35392 : 168.0) no description available & (reliability: 764.0) & (original description: Putative TPP2, Description = Probable thylakoidal processing peptidase 2, chloroplastic, PFAM = PF10502)' T '29.5' 'protein.degradation' 'nbv0.3scaffold35582_14205-21665' '(at1g71696 : 233.0) Encodes a Putative Zn2+ carboxypeptidase, 4 splice variants have been identified but not characterized for different functions and/or expression patterns.SOL1 isolated as a suppressor of root- specific overexpression of CLE19, a clavata3 like gene. sol1 partially suppresses the short root phenotype caused by CLE19 overexpression.; SUPPRESSOR OF LLP1 1 (SOL1); FUNCTIONS IN: metallocarboxypeptidase activity, carboxypeptidase activity, zinc ion binding; INVOLVED IN: regulation of root meristem growth; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Carboxypeptidase-like, regulatory domain (InterPro:IPR008969), Peptidase M14, carboxypeptidase A (InterPro:IPR000834), Carboxypeptidase, regulatory domain (InterPro:IPR014766); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37860 : 190.0) no description available & (gnl|cdd|47908 : 125.0) no description available & (reliability: 466.0) & (original description: Putative cpd, Description = Carboxypeptidase D, PFAM = PF00246)' T '29.5' 'protein.degradation' 'nbv0.3scaffold37836_140-10101' '(at1g63770 : 1566.0) Peptidase M1 family protein; FUNCTIONS IN: metallopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782), Peptidase M1, alanyl aminopeptidase (InterPro:IPR012779); BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1). & (gnl|cdd|30656 : 617.0) no description available & (gnl|cdd|36264 : 415.0) no description available & (reliability: 3132.0) & (original description: Putative MPA1, Description = Puromycin-sensitive aminopeptidase, PFAM = PF11940;PF17432;PF01433)' T '29.5' 'protein.degradation' 'nbv0.3scaffold38883_717-13870' '(at1g60220 : 343.0) Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sGFP:OTS1 protein accumulates in the nucleus. Double mutant analysis with ULP1C/OTS2 indicates that these genes are involved in salt stress responses and flowering time regulation. Over-expression of 35S:OTS1 increases salt tolerance and reduces the level of SUMO-conjugated proteins. OTS1 transcript levels do not appear to change in response to salt, but, salt stress reduces the level of OTS1 protein in a proteasome-dependent manner.; UB-like protease 1D (ULP1D); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G10570.2); Has 2556 Blast hits to 2339 proteins in 246 species: Archae - 0; Bacteria - 12; Metazoa - 1276; Fungi - 441; Plants - 318; Viruses - 13; Other Eukaryotes - 496 (source: NCBI BLink). & (gnl|cdd|35998 : 162.0) no description available & (gnl|cdd|34761 : 119.0) no description available & (reliability: 664.0) & (original description: Putative OTS1, Description = Putative ulp1 protease, PFAM = PF02902)' T '29.5' 'protein.degradation' 'nbv0.3scaffold38883_4230-12047' '(at1g60220 : 181.0) Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sGFP:OTS1 protein accumulates in the nucleus. Double mutant analysis with ULP1C/OTS2 indicates that these genes are involved in salt stress responses and flowering time regulation. Over-expression of 35S:OTS1 increases salt tolerance and reduces the level of SUMO-conjugated proteins. OTS1 transcript levels do not appear to change in response to salt, but, salt stress reduces the level of OTS1 protein in a proteasome-dependent manner.; UB-like protease 1D (ULP1D); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G10570.2); Has 2556 Blast hits to 2339 proteins in 246 species: Archae - 0; Bacteria - 12; Metazoa - 1276; Fungi - 441; Plants - 318; Viruses - 13; Other Eukaryotes - 496 (source: NCBI BLink). & (gnl|cdd|35998 : 92.4) no description available & (gnl|cdd|34761 : 80.9) no description available & (reliability: 330.0) & (original description: Putative OTS1, Description = Ubiquitin-like-specific protease 1D, PFAM = PF02902)' T '29.5' 'protein.degradation' 'nbv0.3scaffold48643_4187-9789' '(at4g38100 : 113.0) unknown protein; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative CURT1D, Description = BnaC03g61060D protein, PFAM = PF14159)' T '29.5' 'protein.degradation' 'nbv0.3scaffold50750_7258-11069' '(at4g22150 : 214.0) Arabidopsis thaliana CDC48-interacting UBX-domain protein (PUX3); plant UBX domain-containing protein 3 (PUX3); INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012), SEP domain (InterPro:IPR012989); BEST Arabidopsis thaliana protein match is: plant UBX domain containing protein 4 (TAIR:AT4G04210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37297 : 195.0) no description available & (gnl|cdd|47854 : 87.3) no description available & (reliability: 428.0) & (original description: Putative PUX3, Description = CDC48-interacting UBX-domain protein 3, PFAM = PF00789;PF08059)' T '29.5' 'protein.degradation' 'nbv0.3scaffold56494_3743-12169' '(at1g76140 : 1122.0) Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106), Peptidase S9A, prolyl oligopeptidase (InterPro:IPR002470); BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT1G20380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37448 : 844.0) no description available & (gnl|cdd|31694 : 455.0) no description available & (reliability: 2244.0) & (original description: Putative prep, Description = Zgc:110670, PFAM = PF00326;PF02897)' T '29.5' 'protein.degradation' 'nbv0.3scaffold56873_1779-10075' '(at3g27110 : 473.0) Peptidase family M48 family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M48 (InterPro:IPR001915); Has 2654 Blast hits to 2654 proteins in 909 species: Archae - 247; Bacteria - 2042; Metazoa - 0; Fungi - 12; Plants - 34; Viruses - 0; Other Eukaryotes - 319 (source: NCBI BLink). & (gnl|cdd|30847 : 91.1) no description available & (reliability: 946.0) & (original description: Putative glr3554, Description = Peptidase M48 Ste24p, PFAM = PF01435)' T '29.5' 'protein.degradation' 'nbv0.3scaffold62777_528-8664' '(at4g33410 : 556.0) SIGNAL PEPTIDE PEPTIDASE-LIKE 1 (SPPL1); FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endosome; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22B, signal peptide peptidase (InterPro:IPR007369); BEST Arabidopsis thaliana protein match is: SIGNAL PEPTIDE PEPTIDASE-LIKE 3 (TAIR:AT2G43070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37654 : 263.0) no description available & (gnl|cdd|67855 : 190.0) no description available & (reliability: 1112.0) & (original description: Putative SPPL1, Description = Signal peptide peptidase-like 1, PFAM = PF04258)' T '29.5' 'protein.degradation' 'nbv0.3scaffold66755_4-8055' '(at5g25950 : 287.0) Protein of Unknown Function (DUF239); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT5G25960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66735 : 200.0) no description available & (reliability: 552.0) & (original description: Putative BnaA06g27990D, Description = BnaA06g27990D protein, PFAM = PF14365;PF03080)' T '29.5' 'protein.degradation' 'nbv0.3scaffold68098_493-9760' '(at1g60220 : 178.0) Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sGFP:OTS1 protein accumulates in the nucleus. Double mutant analysis with ULP1C/OTS2 indicates that these genes are involved in salt stress responses and flowering time regulation. Over-expression of 35S:OTS1 increases salt tolerance and reduces the level of SUMO-conjugated proteins. OTS1 transcript levels do not appear to change in response to salt, but, salt stress reduces the level of OTS1 protein in a proteasome-dependent manner.; UB-like protease 1D (ULP1D); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G10570.2); Has 2556 Blast hits to 2339 proteins in 246 species: Archae - 0; Bacteria - 12; Metazoa - 1276; Fungi - 441; Plants - 318; Viruses - 13; Other Eukaryotes - 496 (source: NCBI BLink). & (gnl|cdd|35998 : 89.7) no description available & (reliability: 324.0) & (original description: Putative OTS1, Description = Putative ulp1 protease, PFAM = PF02902)' T '29.5' 'protein.degradation' 'nbv0.3scaffold68514_5189-9661' '(at3g45010 : 672.0) serine carboxypeptidase-like 48 (scpl48); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 47 (TAIR:AT5G22980.1); Has 3550 Blast hits to 3457 proteins in 337 species: Archae - 0; Bacteria - 135; Metazoa - 672; Fungi - 884; Plants - 1462; Viruses - 0; Other Eukaryotes - 397 (source: NCBI BLink). & (p37891|cbp3_orysa : 663.0) Serine carboxypeptidase 3 precursor (EC 3.4.16.5) (Serine carboxypeptidase III) - Oryza sativa (Rice) & (gnl|cdd|84781 : 429.0) no description available & (gnl|cdd|36496 : 382.0) no description available & (reliability: 1344.0) & (original description: Putative SCP2, Description = Carboxypeptidase, PFAM = PF00450)' T '29.5' 'protein.degradation' 'nbv0.3scaffold87968_1500-5763' '(at1g67420 : 177.0) Zn-dependent exopeptidases superfamily protein; FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M28 (InterPro:IPR007484); BEST Arabidopsis thaliana protein match is: Zn-dependent exopeptidases superfamily protein (TAIR:AT5G20660.1). & (reliability: 354.0) & (original description: Putative At1g67420, Description = Os07g0295800 protein, PFAM = )' T '29.5' 'protein.degradation' 'nbv0.5scaffold111_990347-1004387' '(at1g01650 : 727.0) SIGNAL PEPTIDE PEPTIDASE-LIKE 4 (SPPL4); FUNCTIONS IN: peptidase activity, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22B, signal peptide peptidase (InterPro:IPR007369); BEST Arabidopsis thaliana protein match is: SIGNAL PEPTIDE PEPTIDASE-LIKE 2 (TAIR:AT1G63690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37653 : 566.0) no description available & (gnl|cdd|67855 : 250.0) no description available & (reliability: 1454.0) & (original description: Putative MLF8, Description = Signal peptide peptidase-like 2B, PFAM = PF02225;PF04258)' T '29.5' 'protein.degradation' 'nbv0.5scaffold180_716661-765732' '(at1g67420 : 1028.0) Zn-dependent exopeptidases superfamily protein; FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M28 (InterPro:IPR007484); BEST Arabidopsis thaliana protein match is: Zn-dependent exopeptidases superfamily protein (TAIR:AT5G20660.1). & (gnl|cdd|37405 : 301.0) no description available & (gnl|cdd|86644 : 135.0) no description available & (reliability: 2056.0) & (original description: Putative At1g67420, Description = Zn-dependent exopeptidase-like protein, PFAM = PF04389)' T '29.5' 'protein.degradation' 'nbv0.5scaffold230_159943-168158' '(at2g24280 : 632.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: serine-type peptidase activity, serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system, lysosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S28 (InterPro:IPR008758); BEST Arabidopsis thaliana protein match is: Serine carboxypeptidase S28 family protein (TAIR:AT5G65760.1); Has 1253 Blast hits to 1217 proteins in 170 species: Archae - 0; Bacteria - 7; Metazoa - 611; Fungi - 189; Plants - 249; Viruses - 0; Other Eukaryotes - 197 (source: NCBI BLink). & (gnl|cdd|37394 : 499.0) no description available & (gnl|cdd|86891 : 242.0) no description available & (reliability: 1264.0) & (original description: Putative prcp, Description = Lysosomal Pro-X carboxypeptidase, PFAM = PF05577)' T '29.5' 'protein.degradation' 'nbv0.5scaffold232_804457-881924' '(at1g67690 : 825.0) Zincin-like metalloproteases family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M3A/M3B, thimet/oligopeptidase F (InterPro:IPR001567); BEST Arabidopsis thaliana protein match is: Zincin-like metalloproteases family protein (TAIR:AT5G51540.1); Has 5194 Blast hits to 5176 proteins in 1382 species: Archae - 6; Bacteria - 3154; Metazoa - 337; Fungi - 406; Plants - 147; Viruses - 0; Other Eukaryotes - 1144 (source: NCBI BLink). & (gnl|cdd|37300 : 602.0) no description available & (gnl|cdd|30687 : 375.0) no description available & (reliability: 1650.0) & (original description: Putative At1g67690, Description = Probable thimet oligopeptidase, PFAM = PF01432)' T '29.5' 'protein.degradation' 'nbv0.5scaffold545_362417-371722' '(at3g12203 : 376.0) serine carboxypeptidase-like 17 (scpl17); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 16 (TAIR:AT3G12220.1); Has 3617 Blast hits to 3541 proteins in 365 species: Archae - 0; Bacteria - 182; Metazoa - 630; Fungi - 840; Plants - 1564; Viruses - 0; Other Eukaryotes - 401 (source: NCBI BLink). & (gnl|cdd|84781 : 322.0) no description available & (gnl|cdd|36496 : 212.0) no description available & (p37890|cbp1_orysa : 159.0) Serine carboxypeptidase 1 precursor (EC 3.4.16.5) (Serine carboxypeptidase I) (Carboxypeptidase C) - Oryza sativa (Rice) & (reliability: 710.0) & (original description: Putative SCPL17, Description = Serine carboxypeptidase-like 17, PFAM = PF00450;PF00450)' T '29.5' 'protein.degradation' 'nbv0.5scaffold999_506427-509988' '(gnl|cdd|79246 : 391.0) no description available & (p12210|clpp_tobac : 357.0) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Nicotiana tabacum (Common tobacco) & (atcg00670 : 327.0) Encodes the only ClpP (caseinolytic protease) encoded within the plastid genome. Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). Part of the 350 kDa chloroplast Clp complex. The name reflects nomenclature described in Adam et. al (2001).; plastid-encoded CLP P (PCLPP); FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast thylakoid membrane, chloroplastic endopeptidase Clp complex, plastid stroma, chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP, active site (InterPro:IPR018215), Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: CLP protease proteolytic subunit 2 (TAIR:AT1G12410.1). & (gnl|cdd|36058 : 275.0) no description available & (reliability: 654.0) & (original description: Putative clpP, Description = ATP-dependent Clp protease proteolytic subunit, PFAM = PF00574)' T '29.5' 'protein.degradation' 'nbv0.5scaffold1122_123422-133444' '(at1g67420 : 580.0) Zn-dependent exopeptidases superfamily protein; FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M28 (InterPro:IPR007484); BEST Arabidopsis thaliana protein match is: Zn-dependent exopeptidases superfamily protein (TAIR:AT5G20660.1). & (gnl|cdd|37405 : 249.0) no description available & (gnl|cdd|86644 : 136.0) no description available & (reliability: 1160.0) & (original description: Putative Ermp1, Description = Endoplasmic reticulum metallopeptidase 1, PFAM = PF04389)' T '29.5' 'protein.degradation' 'nbv0.5scaffold1471_309998-341498' '(at1g50380 : 500.0) Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106), Peptidase S9A, prolyl oligopeptidase (InterPro:IPR002470); BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT1G69020.1); Has 7641 Blast hits to 7556 proteins in 1214 species: Archae - 80; Bacteria - 3203; Metazoa - 306; Fungi - 27; Plants - 212; Viruses - 0; Other Eukaryotes - 3813 (source: NCBI BLink). & (gnl|cdd|31956 : 446.0) no description available & (gnl|cdd|37448 : 395.0) no description available & (reliability: 1000.0) & (original description: Putative prtB, Description = Protease 2, PFAM = PF00326)' T '29.5' 'protein.degradation' 'nbv0.5scaffold1588_328716-344649' '(at1g71696 : 587.0) Encodes a Putative Zn2+ carboxypeptidase, 4 splice variants have been identified but not characterized for different functions and/or expression patterns.SOL1 isolated as a suppressor of root- specific overexpression of CLE19, a clavata3 like gene. sol1 partially suppresses the short root phenotype caused by CLE19 overexpression.; SUPPRESSOR OF LLP1 1 (SOL1); FUNCTIONS IN: metallocarboxypeptidase activity, carboxypeptidase activity, zinc ion binding; INVOLVED IN: regulation of root meristem growth; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Carboxypeptidase-like, regulatory domain (InterPro:IPR008969), Peptidase M14, carboxypeptidase A (InterPro:IPR000834), Carboxypeptidase, regulatory domain (InterPro:IPR014766); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37860 : 423.0) no description available & (gnl|cdd|84641 : 211.0) no description available & (reliability: 1174.0) & (original description: Putative SOL1, Description = Carboxypeptidase SOL1, PFAM = PF00246)' T '29.5' 'protein.degradation' 'nbv0.5scaffold1597_343290-357600' '(at1g73990 : 872.0) Encodes a putative protease SppA (SppA).; signal peptide peptidase (SPPA); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S49, protease IV (InterPro:IPR004634), Peptidase S49 (InterPro:IPR002142), Peptidase S49, SppA (InterPro:IPR004635); Has 9340 Blast hits to 7649 proteins in 1706 species: Archae - 204; Bacteria - 6183; Metazoa - 9; Fungi - 4; Plants - 52; Viruses - 43; Other Eukaryotes - 2845 (source: NCBI BLink). & (gnl|cdd|30961 : 191.0) no description available & (reliability: 1744.0) & (original description: Putative SPPA, Description = Serine protease SPPA, chloroplastic, PFAM = PF01343;PF01343)' T '29.5' 'protein.degradation' 'nbv0.5scaffold1597_343570-357675' '(at1g73990 : 792.0) Encodes a putative protease SppA (SppA).; signal peptide peptidase (SPPA); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S49, protease IV (InterPro:IPR004634), Peptidase S49 (InterPro:IPR002142), Peptidase S49, SppA (InterPro:IPR004635); Has 9340 Blast hits to 7649 proteins in 1706 species: Archae - 204; Bacteria - 6183; Metazoa - 9; Fungi - 4; Plants - 52; Viruses - 43; Other Eukaryotes - 2845 (source: NCBI BLink). & (gnl|cdd|30961 : 185.0) no description available & (reliability: 1584.0) & (original description: Putative SPPA, Description = Protease 4, PFAM = PF01343;PF01343)' T '29.5' 'protein.degradation' 'nbv0.5scaffold1831_372892-381760' '(at4g20070 : 663.0) The gene encoding Arabidopsis thaliana Allantoate Amidohydrolase (AtAAH)which catalyzes the allantoate deiminase reaction (EC 3.5.3.9)is expressed in all parts of the plant being consistent with a function in purine turnover in Arabidopsis.; allantoate amidohydrolase (AAH); CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), ArgE/DapE/ACY1/CPG2/YscS, conserved site (InterPro:IPR001261), Amidase, hydantoinase/carbamoylase (InterPro:IPR010158), Peptidase M20, dimerisation (InterPro:IPR011650); BEST Arabidopsis thaliana protein match is: ureidoglycolate amidohydrolase (TAIR:AT5G43600.1); Has 3541 Blast hits to 3529 proteins in 962 species: Archae - 54; Bacteria - 2502; Metazoa - 32; Fungi - 158; Plants - 88; Viruses - 0; Other Eukaryotes - 707 (source: NCBI BLink). & (gnl|cdd|82918 : 370.0) no description available & (reliability: 1326.0) & (original description: Putative aah, Description = Allantoate amidohydrolase, PFAM = PF07687;PF01546)' T '29.5' 'protein.degradation' 'nbv0.5scaffold1833_377524-401491' '(at4g20310 : 388.0) Peptidase M50 family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M50 (InterPro:IPR008915); Has 156 Blast hits to 154 proteins in 70 species: Archae - 19; Bacteria - 0; Metazoa - 104; Fungi - 2; Plants - 26; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|38132 : 253.0) no description available & (reliability: 776.0) & (original description: Putative S2P, Description = Membrane-bound transcription factor site-2 protease homolog, PFAM = PF02163)' T '29.5' 'protein.degradation' 'nbv0.5scaffold1970_1209-13055' '(at1g01650 : 806.0) SIGNAL PEPTIDE PEPTIDASE-LIKE 4 (SPPL4); FUNCTIONS IN: peptidase activity, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22B, signal peptide peptidase (InterPro:IPR007369); BEST Arabidopsis thaliana protein match is: SIGNAL PEPTIDE PEPTIDASE-LIKE 2 (TAIR:AT1G63690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37653 : 605.0) no description available & (gnl|cdd|67855 : 286.0) no description available & (reliability: 1612.0) & (original description: Putative SPPL4, Description = Signal peptide peptidase-like 4, PFAM = PF04258;PF02225)' T '29.5' 'protein.degradation' 'nbv0.5scaffold2079_270688-277435' '(at1g76140 : 417.0) Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106), Peptidase S9A, prolyl oligopeptidase (InterPro:IPR002470); BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT1G20380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37448 : 336.0) no description available & (gnl|cdd|31694 : 235.0) no description available & (reliability: 834.0) & (original description: Putative prep, Description = Prolyl endopeptidase, PFAM = PF00326;PF02897)' T '29.5' 'protein.degradation' 'nbv0.5scaffold2193_33073-78730' '(at1g60220 : 306.0) Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sGFP:OTS1 protein accumulates in the nucleus. Double mutant analysis with ULP1C/OTS2 indicates that these genes are involved in salt stress responses and flowering time regulation. Over-expression of 35S:OTS1 increases salt tolerance and reduces the level of SUMO-conjugated proteins. OTS1 transcript levels do not appear to change in response to salt, but, salt stress reduces the level of OTS1 protein in a proteasome-dependent manner.; UB-like protease 1D (ULP1D); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G10570.2); Has 2556 Blast hits to 2339 proteins in 246 species: Archae - 0; Bacteria - 12; Metazoa - 1276; Fungi - 441; Plants - 318; Viruses - 13; Other Eukaryotes - 496 (source: NCBI BLink). & (gnl|cdd|35998 : 138.0) no description available & (gnl|cdd|34761 : 117.0) no description available & (reliability: 552.0) & (original description: Putative OTS1, Description = Ubiquitin-like-specific protease 1D, PFAM = PF02902)' T '29.5' 'protein.degradation' 'nbv0.5scaffold2227_296769-336354' '(at5g42620 : 182.0) metalloendopeptidases;zinc ion binding; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis, cell adhesion; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EGF, extracellular (InterPro:IPR013111), EGF-like, type 3 (InterPro:IPR000742), EGF-like region, conserved site (InterPro:IPR013032), Peptidase M8, leishmanolysin (InterPro:IPR001577). & (reliability: 364.0) & (original description: Putative TNXB, Description = Leishmanolysin-like peptidase, PFAM = PF07974)' T '29.5' 'protein.degradation' 'nbv0.5scaffold2356_13918-23821' '(at4g11740 : 335.0) Isolated as a suppressor of a dominant mutant in the Ara4 gene that was expressed in yeast ypt1 mutant strains. A novel protein with a small region of similarity to coil-coiled domain of yeast VSP27 protein.; SAY1; INVOLVED IN: vesicle-mediated transport; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012), Ubiquitin interacting motif (InterPro:IPR003903), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G23040.1); Has 5504 Blast hits to 4000 proteins in 512 species: Archae - 3; Bacteria - 644; Metazoa - 2099; Fungi - 780; Plants - 360; Viruses - 48; Other Eukaryotes - 1570 (source: NCBI BLink). & (gnl|cdd|36577 : 143.0) no description available & (reliability: 642.0) & (original description: Putative PUX8, Description = Plant UBX domain-containing protein 8, PFAM = PF00789;PF14555)' T '29.5' 'protein.degradation' 'nbv0.5scaffold3082_34569-189087' '(at4g18370 : 285.0) Encodes DEG5. Forms a hexamer with DEG8 in the thylakoid lumen. Involved in the cleavage of photodamaged D2 protein of photosystem II (PSII).; DEGP protease 5 (DEG5); FUNCTIONS IN: serine-type peptidase activity, catalytic activity, serine-type endopeptidase activity; INVOLVED IN: photosystem II repair, proteolysis; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254); BEST Arabidopsis thaliana protein match is: DegP protease 1 (TAIR:AT3G27925.1); Has 15121 Blast hits to 15118 proteins in 2570 species: Archae - 102; Bacteria - 10211; Metazoa - 307; Fungi - 110; Plants - 358; Viruses - 2; Other Eukaryotes - 4031 (source: NCBI BLink). & (gnl|cdd|36534 : 150.0) no description available & (gnl|cdd|30614 : 116.0) no description available & (reliability: 570.0) & (original description: Putative deg8, Description = 2-alkenal reductase, PFAM = PF13365)' T '29.5' 'protein.degradation' 'nbv0.5scaffold3716_23658-37068' '(at2g24280 : 730.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: serine-type peptidase activity, serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system, lysosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S28 (InterPro:IPR008758); BEST Arabidopsis thaliana protein match is: Serine carboxypeptidase S28 family protein (TAIR:AT5G65760.1); Has 1253 Blast hits to 1217 proteins in 170 species: Archae - 0; Bacteria - 7; Metazoa - 611; Fungi - 189; Plants - 249; Viruses - 0; Other Eukaryotes - 197 (source: NCBI BLink). & (gnl|cdd|37394 : 606.0) no description available & (gnl|cdd|86891 : 274.0) no description available & (reliability: 1460.0) & (original description: Putative Prcp, Description = Lysosomal Pro-X carboxypeptidase, PFAM = PF05577)' T '29.5' 'protein.degradation' 'nbv0.5scaffold3722_127125-145896' '(at4g01320 : 684.0) CAAX protease with broad substrate specificity. Localized exclusively to the endoplasmic reticulum.; ATSTE24; FUNCTIONS IN: endopeptidase activity, metalloendopeptidase activity; INVOLVED IN: CAAX-box protein maturation, proteolysis; LOCATED IN: endoplasmic reticulum, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M48 (InterPro:IPR001915); Has 2991 Blast hits to 2984 proteins in 996 species: Archae - 162; Bacteria - 1572; Metazoa - 206; Fungi - 172; Plants - 49; Viruses - 0; Other Eukaryotes - 830 (source: NCBI BLink). & (gnl|cdd|37930 : 435.0) no description available & (gnl|cdd|85452 : 118.0) no description available & (reliability: 1368.0) & (original description: Putative FACE1, Description = CAAX prenyl protease 1 homolog, PFAM = PF16491;PF01435)' T '29.5' 'protein.degradation' 'nbv0.5scaffold3820_9961-19417' '(at5g43600 : 633.0) Encodes a protein with ureidoglycolate amidohydrolase activity in vitro. It is 27% identical and 43% similar to the E. coli allantoate amidohydrolase (AAH), but, in vitro assays with purified protein and allantoate as a substrate do not show any increase in ammonium concentration, indicating that there this enzyme has no AAH activity.; ureidoglycolate amidohydrolase (UAH); FUNCTIONS IN: metallopeptidase activity, ureidoglycolate hydrolase activity; INVOLVED IN: proteolysis, allantoin catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Amidase, hydantoinase/carbamoylase (InterPro:IPR010158), Peptidase M20, dimerisation (InterPro:IPR011650); BEST Arabidopsis thaliana protein match is: allantoate amidohydrolase (TAIR:AT4G20070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|82918 : 411.0) no description available & (reliability: 1266.0) & (original description: Putative UAH, Description = Ureidoglycolate hydrolase, PFAM = PF01546)' T '29.5' 'protein.degradation' 'nbv0.5scaffold3953_161168-167492' '(at1g28320 : 432.0) Mutants in this gene are defective in the processing of pre-glyoxysomal malate dehydrogenase (pre-gMDH) to gMDH.; DEG15; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003); BEST Arabidopsis thaliana protein match is: DegP protease 1 (TAIR:AT3G27925.1); Has 3917 Blast hits to 3716 proteins in 1340 species: Archae - 34; Bacteria - 3021; Metazoa - 72; Fungi - 16; Plants - 139; Viruses - 0; Other Eukaryotes - 635 (source: NCBI BLink). & (reliability: 864.0) & (original description: Putative GPP, Description = Glyoxysomal processing protease, glyoxysomal-like protein, PFAM = PF13365)' T '29.5' 'protein.degradation' 'nbv0.5scaffold4049_13188-15814' '(at1g75460 : 350.0) ATP-dependent protease La (LON) domain protein; FUNCTIONS IN: ATP-dependent peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, lon N-terminal (InterPro:IPR003111); BEST Arabidopsis thaliana protein match is: ATP-dependent protease La (LON) domain protein (TAIR:AT1G19740.1); Has 3715 Blast hits to 3715 proteins in 882 species: Archae - 0; Bacteria - 1742; Metazoa - 186; Fungi - 45; Plants - 112; Viruses - 0; Other Eukaryotes - 1630 (source: NCBI BLink). & (gnl|cdd|39361 : 185.0) no description available & (gnl|cdd|32634 : 119.0) no description available & (reliability: 700.0) & (original description: Putative lon2, Description = Lon protease 2, PFAM = PF02190)' T '29.5' 'protein.degradation' 'nbv0.5scaffold4499_125459-130805' '(at5g50150 : 637.0) Protein of Unknown Function (DUF239); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G23340.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66735 : 258.0) no description available & (reliability: 1218.0) & (original description: Putative NIP1, Description = NEP-interacting protein 1, PFAM = PF14365;PF03080)' T '29.5' 'protein.degradation' 'nbv0.5scaffold4518_93623-121774' '(at1g63770 : 1556.0) Peptidase M1 family protein; FUNCTIONS IN: metallopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782), Peptidase M1, alanyl aminopeptidase (InterPro:IPR012779); BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1). & (gnl|cdd|30656 : 611.0) no description available & (gnl|cdd|36264 : 400.0) no description available & (reliability: 3112.0) & (original description: Putative pepN, Description = Aminopeptidase N, PFAM = PF01433;PF11940;PF17432)' T '29.5' 'protein.degradation' 'nbv0.5scaffold6578_24109-32825' '(at2g45270 : 681.0) Mitochondrial protein essential for embryo development.; glycoprotease 1 (GCP1); FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis, embryo development; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M22, O-sialoglycoprotein peptidase (InterPro:IPR022450), Peptidase M22, glycoprotease (InterPro:IPR000905), Peptidase M22, glycoprotease, subgroup (InterPro:IPR017861); BEST Arabidopsis thaliana protein match is: Actin-like ATPase superfamily protein (TAIR:AT4G22720.2); Has 11122 Blast hits to 11085 proteins in 2922 species: Archae - 268; Bacteria - 6121; Metazoa - 269; Fungi - 294; Plants - 213; Viruses - 0; Other Eukaryotes - 3957 (source: NCBI BLink). & (gnl|cdd|37918 : 455.0) no description available & (gnl|cdd|83105 : 381.0) no description available & (reliability: 1362.0) & (original description: Putative GCP1, Description = Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial, PFAM = PF00814)' T '29.5' 'protein.degradation' 'nbv0.5scaffold6616_49680-57736' '(at5g25950 : 281.0) Protein of Unknown Function (DUF239); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT5G25960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66735 : 200.0) no description available & (reliability: 544.0) & (original description: Putative T1N24.5, Description = T1N24.5 protein, PFAM = PF03080;PF14365)' T '29.5' 'protein.degradation' 'nbv0.5scaffold7057_44229-50736' '(at1g35340 : 249.0) ATP-dependent protease La (LON) domain protein; FUNCTIONS IN: ATP-dependent peptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, lon N-terminal (InterPro:IPR003111). & (reliability: 498.0) & (original description: Putative At1g35340, Description = ATP-dependent protease La (LON) domain-containing protein, PFAM = PF02190)' T '29.5' 'protein.degradation' 'nbv0.5scaffold7063_9501-13396' '(at3g52500 : 376.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G45120.1); Has 2297 Blast hits to 2281 proteins in 180 species: Archae - 0; Bacteria - 0; Metazoa - 245; Fungi - 122; Plants - 1871; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|36553 : 165.0) no description available & (reliability: 752.0) & (original description: Putative API1, Description = Aspartic protease, PFAM = PF14541;PF14543)' T '29.5' 'protein.degradation' 'niben044scf00000502ctg008_2977-7579' '(at1g10750 : 416.0) Protein of Unknown Function (DUF239); INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G23340.2); Has 789 Blast hits to 744 proteins in 31 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 10; Plants - 764; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66735 : 172.0) no description available & (reliability: 832.0) & (original description: Putative NIP1, Description = Carboxyl-terminal peptidase, PFAM = PF03080;PF14365)' T '29.5' 'protein.degradation' 'niben044scf00000859ctg000_6333-10043' '(at4g22150 : 222.0) Arabidopsis thaliana CDC48-interacting UBX-domain protein (PUX3); plant UBX domain-containing protein 3 (PUX3); INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012), SEP domain (InterPro:IPR012989); BEST Arabidopsis thaliana protein match is: plant UBX domain containing protein 4 (TAIR:AT4G04210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37297 : 203.0) no description available & (gnl|cdd|47854 : 89.2) no description available & (reliability: 444.0) & (original description: Putative PUX3, Description = CDC48-interacting UBX-domain protein 3, PFAM = PF00789;PF08059)' T '29.5' 'protein.degradation' 'niben044scf00002982ctg025_1809-6155' '(at1g55360 : 688.0) Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT3G13510.1); Has 753 Blast hits to 700 proteins in 28 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 10; Plants - 728; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66735 : 277.0) no description available & (reliability: 1372.0) & (original description: Putative NIP1, Description = NEP-interacting protein 1, PFAM = PF14365;PF03080)' T '29.5' 'protein.degradation' 'niben044scf00003462ctg002_1651-5983' '(at5g27430 : 255.0) Signal peptidase subunit; FUNCTIONS IN: peptidase activity; INVOLVED IN: signal peptide processing; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Signal peptidase 22kDa subunit (InterPro:IPR007653); BEST Arabidopsis thaliana protein match is: Signal peptidase subunit (TAIR:AT3G05230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38582 : 193.0) no description available & (gnl|cdd|68156 : 172.0) no description available & (q9lgb4|spcs3_orysa : 116.0) Probable signal peptidase complex subunit 3 (EC 3.4.-.-) (Microsomal signal peptidase 22 kDa subunit) (SPase 22 kDa subunit) (SPC22) - Oryza sativa (Rice) & (reliability: 490.0) & (original description: Putative At5g27430, Description = Signal peptidase complex subunit 3B, PFAM = PF04573)' T '29.5' 'protein.degradation' 'niben044scf00004852ctg010_4239-11673' '(at4g14570 : 800.0) acylaminoacyl-peptidase-related; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G36210.1); Has 9037 Blast hits to 9017 proteins in 1444 species: Archae - 238; Bacteria - 5246; Metazoa - 1023; Fungi - 365; Plants - 298; Viruses - 0; Other Eukaryotes - 1867 (source: NCBI BLink). & (gnl|cdd|31695 : 112.0) no description available & (gnl|cdd|37311 : 90.9) no description available & (reliability: 1600.0) & (original description: Putative Os10g0415800, Description = Acylamino-acid-releasing enzyme 2, PFAM = PF00326;PF07676)' T '29.5' 'protein.degradation' 'niben044scf00004852ctg011_1-6405' '(at4g14570 : 341.0) acylaminoacyl-peptidase-related; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G36210.1); Has 9037 Blast hits to 9017 proteins in 1444 species: Archae - 238; Bacteria - 5246; Metazoa - 1023; Fungi - 365; Plants - 298; Viruses - 0; Other Eukaryotes - 1867 (source: NCBI BLink). & (gnl|cdd|31695 : 156.0) no description available & (gnl|cdd|37311 : 149.0) no description available & (reliability: 682.0) & (original description: Putative ACPH, Description = ACPH, PFAM = PF00326)' T '29.5' 'protein.degradation' 'niben044scf00004854ctg000_1310-10395' '(at1g76140 : 1174.0) Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106), Peptidase S9A, prolyl oligopeptidase (InterPro:IPR002470); BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT1G20380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37448 : 916.0) no description available & (gnl|cdd|31694 : 486.0) no description available & (reliability: 2348.0) & (original description: Putative PREP, Description = Prolyl endopeptidase, PFAM = PF02897;PF00326)' T '29.5' 'protein.degradation' 'niben044scf00004997ctg007_1234-13050' '(at4g33090 : 1240.0) encodes an aminopeptidase, a ortholog of mouse microsomal AP (EC 3.4.11.2).; aminopeptidase M1 (APM1); FUNCTIONS IN: aminopeptidase activity; INVOLVED IN: auxin polar transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, puromycin-sensitive aminopeptidase (InterPro:IPR015568), Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782); BEST Arabidopsis thaliana protein match is: Peptidase M1 family protein (TAIR:AT1G63770.3); Has 9205 Blast hits to 9101 proteins in 1870 species: Archae - 122; Bacteria - 4443; Metazoa - 2260; Fungi - 495; Plants - 237; Viruses - 0; Other Eukaryotes - 1648 (source: NCBI BLink). & (gnl|cdd|36264 : 667.0) no description available & (gnl|cdd|30656 : 372.0) no description available & (reliability: 2480.0) & (original description: Putative APM1, Description = Aminopeptidase M1, PFAM = PF11838;PF01433)' T '29.5' 'protein.degradation' 'niben044scf00005031ctg006_1-5427' '(at1g79340 : 523.0) metacaspase 4 (MC4); FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 5 (TAIR:AT1G79330.1); Has 1195 Blast hits to 1161 proteins in 285 species: Archae - 6; Bacteria - 340; Metazoa - 3; Fungi - 271; Plants - 332; Viruses - 0; Other Eukaryotes - 243 (source: NCBI BLink). & (gnl|cdd|36759 : 246.0) no description available & (gnl|cdd|84933 : 123.0) no description available & (reliability: 1046.0) & (original description: Putative AMC4, Description = Metacaspase-4, PFAM = PF00656)' T '29.5' 'protein.degradation' 'niben044scf00006055ctg005_832-7243' '(at3g51800 : 525.0) putative nuclear DNA-binding protein G2p (AtG2) mRNA,; ATG2; FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, cellular process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24, structural domain (InterPro:IPR000994), Proliferation-associated protein 1 (InterPro:IPR004545), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 2A (TAIR:AT2G44180.1). & (gnl|cdd|37987 : 436.0) no description available & (gnl|cdd|73244 : 233.0) no description available & (reliability: 1050.0) & (original description: Putative EBP1, Description = ERBB-3 BINDING PROTEIN 1, PFAM = PF00557)' T '29.5' 'protein.degradation' 'niben044scf00006803ctg009_7590-11396' '(at1g77480 : 414.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G44130.1); Has 1743 Blast hits to 1735 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 23; Plants - 1626; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (q6yny7|asp1_orysa : 282.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (gnl|cdd|36553 : 191.0) no description available & (reliability: 814.0) & (original description: Putative ASP1, Description = Aspartic proteinase Asp1, PFAM = PF14543;PF14541)' T '29.5' 'protein.degradation' 'niben044scf00006966ctg010_3552-5445' '(at4g22720 : 290.0) Actin-like ATPase superfamily protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M22, glycoprotease (InterPro:IPR000905), Peptidase M22, glycoprotease, subgroup (InterPro:IPR017861); BEST Arabidopsis thaliana protein match is: glycoprotease 1 (TAIR:AT2G45270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37919 : 278.0) no description available & (gnl|cdd|83106 : 213.0) no description available & (reliability: 580.0) & (original description: Putative gcp, Description = t(6)A synthase, PFAM = PF00814)' T '29.5' 'protein.degradation' 'niben044scf00007351ctg009_9962-22249' '(at4g36760 : 998.0) Arabidopsis aminopeptidase P1; aminopeptidase P1 (APP1); FUNCTIONS IN: aminopeptidase activity, N-1-naphthylphthalamic acid binding; INVOLVED IN: auxin polar transport; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site (InterPro:IPR001131), Peptidase M24, structural domain (InterPro:IPR000994), Creatinase (InterPro:IPR000587); BEST Arabidopsis thaliana protein match is: Metallopeptidase M24 family protein (TAIR:AT3G05350.1); Has 10398 Blast hits to 10335 proteins in 2401 species: Archae - 277; Bacteria - 6310; Metazoa - 362; Fungi - 246; Plants - 146; Viruses - 0; Other Eukaryotes - 3057 (source: NCBI BLink). & (gnl|cdd|37624 : 777.0) no description available & (gnl|cdd|29970 : 350.0) no description available & (reliability: 1996.0) & (original description: Putative app2, Description = Xaa-Pro aminopeptidase 2, PFAM = PF01321;PF00557;PF16189;PF16188)' T '29.5' 'protein.degradation' 'niben044scf00008326ctg016_1-2376' '(at4g10790 : 217.0) UBX domain-containing protein; CONTAINS InterPro DOMAIN/s: UAS (InterPro:IPR006577), UBX (InterPro:IPR001012); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G23040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36577 : 123.0) no description available & (reliability: 434.0) & (original description: Putative PUX10, Description = Thioredoxin-like fold, PFAM = PF00789)' T '29.5' 'protein.degradation' 'niben044scf00009094ctg001_3208-13665' '(at1g14570 : 460.0) UBX domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UAS (InterPro:IPR006577), Uncharacterised conserved protein UCP037991, UAS, UBX (InterPro:IPR017346), UBX (InterPro:IPR001012), Ubiquitin interacting motif (InterPro:IPR003903), UBA-like (InterPro:IPR009060), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: structural constituent of ribosome (TAIR:AT4G14250.1); Has 596 Blast hits to 582 proteins in 180 species: Archae - 0; Bacteria - 6; Metazoa - 214; Fungi - 136; Plants - 152; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|36578 : 198.0) no description available & (gnl|cdd|48507 : 152.0) no description available & (reliability: 920.0) & (original description: Putative PUX7, Description = Plant UBX domain-containing protein 7, PFAM = PF14555;PF13899;PF00789)' T '29.5' 'protein.degradation' 'niben044scf00010974ctg003_13355-28573' '(at4g17510 : 355.0) ubiquitin C-terminal hydrolase 3 (UCH3); FUNCTIONS IN: ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (InterPro:IPR001578); BEST Arabidopsis thaliana protein match is: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (TAIR:AT1G65650.1); Has 1294 Blast hits to 1288 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 624; Fungi - 359; Plants - 155; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (gnl|cdd|36629 : 287.0) no description available & (gnl|cdd|85235 : 224.0) no description available & (reliability: 710.0) & (original description: Putative UCH3, Description = Ubiquitin carboxyl-terminal hydrolase 3, PFAM = PF01088)' T '29.5' 'protein.degradation' 'niben044scf00011771ctg006_75-4677' '(at5g50650 : 204.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G50550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35990 : 175.0) no description available & (reliability: 398.0) & (original description: Putative ST12P, Description = SEC12-like protein 2, PFAM = PF00400;PF00400)' T '29.5' 'protein.degradation' 'niben044scf00012537ctg002_77-8809' '(at1g01650 : 463.0) SIGNAL PEPTIDE PEPTIDASE-LIKE 4 (SPPL4); FUNCTIONS IN: peptidase activity, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22B, signal peptide peptidase (InterPro:IPR007369); BEST Arabidopsis thaliana protein match is: SIGNAL PEPTIDE PEPTIDASE-LIKE 2 (TAIR:AT1G63690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37653 : 368.0) no description available & (gnl|cdd|80354 : 181.0) no description available & (reliability: 926.0) & (original description: Putative MLF8, Description = Signal peptide peptidase-like 2B, PFAM = PF04258;PF02225)' T '29.5' 'protein.degradation' 'niben044scf00013797ctg006_1-16349' '(at5g49570 : 675.0) Encodes a protein that has peptide:N-glycanase activity in enzymatic assay in heterologous systems (although the activity was not detected in wild-type plants).; peptide-N-glycanase 1 (PNG1); CONTAINS InterPro DOMAIN/s: Transglutaminase-like (InterPro:IPR002931), DNA repair protein Rad4, transglutaminase-like domain (InterPro:IPR018325), Galactose-binding domain-like (InterPro:IPR008979); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7f0r1|png1_orysa : 514.0) Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase (EC 3.5.1.52) (Peptide:N-glycanase) - Oryza sativa (Rice) & (gnl|cdd|36127 : 415.0) no description available & (reliability: 1350.0) & (original description: Putative PNG1, Description = Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase, PFAM = PF03835)' T '29.5' 'protein.degradation' 'niben044scf00014848ctg019_9992-19845' '(at5g22760 : 444.0) PHD finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain (InterPro:IPR004022), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Zinc finger, PHD-type (InterPro:IPR001965), DDT domain superfamily (InterPro:IPR018501), DDT domain, subgroup (InterPro:IPR018500), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: metalloendopeptidases;zinc ion binding;DNA binding (TAIR:AT5G35210.2); Has 3640 Blast hits to 3265 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 2369; Fungi - 398; Plants - 598; Viruses - 0; Other Eukaryotes - 275 (source: NCBI BLink). & (gnl|cdd|36686 : 351.0) no description available & (reliability: 854.0) & (original description: Putative DDP1, Description = Nucleosome-remodeling factor subunit BPTF, PFAM = PF15612;PF00628;PF02791)' T '29.5' 'protein.degradation' 'niben044scf00015162ctg001_185-15266' '(at5g51540 : 788.0) Zincin-like metalloproteases family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast thylakoid membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Peptidase M3A/M3B, thimet/oligopeptidase F (InterPro:IPR001567); BEST Arabidopsis thaliana protein match is: Zincin-like metalloproteases family protein (TAIR:AT1G67690.1); Has 5499 Blast hits to 5482 proteins in 1556 species: Archae - 6; Bacteria - 3417; Metazoa - 330; Fungi - 489; Plants - 134; Viruses - 0; Other Eukaryotes - 1123 (source: NCBI BLink). & (gnl|cdd|37301 : 576.0) no description available & (gnl|cdd|30687 : 274.0) no description available & (reliability: 1576.0) & (original description: Putative Sb10g027820, Description = Putative uncharacterized protein Sb10g027820, PFAM = PF01432)' T '29.5' 'protein.degradation' 'niben044scf00015519ctg006_764-12685' '(at4g36760 : 926.0) Arabidopsis aminopeptidase P1; aminopeptidase P1 (APP1); FUNCTIONS IN: aminopeptidase activity, N-1-naphthylphthalamic acid binding; INVOLVED IN: auxin polar transport; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site (InterPro:IPR001131), Peptidase M24, structural domain (InterPro:IPR000994), Creatinase (InterPro:IPR000587); BEST Arabidopsis thaliana protein match is: Metallopeptidase M24 family protein (TAIR:AT3G05350.1); Has 10398 Blast hits to 10335 proteins in 2401 species: Archae - 277; Bacteria - 6310; Metazoa - 362; Fungi - 246; Plants - 146; Viruses - 0; Other Eukaryotes - 3057 (source: NCBI BLink). & (gnl|cdd|37624 : 742.0) no description available & (gnl|cdd|29970 : 351.0) no description available & (reliability: 1852.0) & (original description: Putative app2, Description = Xaa-Pro aminopeptidase 2, PFAM = PF16188;PF16189;PF00557;PF01321)' T '29.5' 'protein.degradation' 'niben044scf00016903ctg020_723-3110' '(at1g02170 : 124.0) Metacaspase AtMCP1b. Arginine/lysine-specific cysteine protease activity. Induces apoptosis in yeast. Contains Pfam profile PF00656: ICE-like protease (caspase) p20 domain; metacaspase 1 (AMC1); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis, induction of apoptosis; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735), Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 2 (TAIR:AT4G25110.1); Has 1179 Blast hits to 1148 proteins in 266 species: Archae - 3; Bacteria - 262; Metazoa - 3; Fungi - 268; Plants - 419; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|36759 : 123.0) no description available & (reliability: 248.0) & (original description: Putative AMC1, Description = ICE-like protease p20 domain containing protein, expressed, PFAM = PF00656;PF06943)' T '29.5' 'protein.degradation' 'niben044scf00018176ctg006_1-4671' '(at1g10750 : 325.0) Protein of Unknown Function (DUF239); INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G23340.2); Has 789 Blast hits to 744 proteins in 31 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 10; Plants - 764; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66735 : 95.0) no description available & (reliability: 650.0) & (original description: Putative pco103663, Description = Carboxyl-terminal peptidase, PFAM = PF14365;PF03080)' T '29.5' 'protein.degradation' 'niben044scf00018248ctg001_123-2898' '(at1g78680 : 186.0) The Arabidopsis protein AtGGH2 is a gamma-glutamyl hydrolase acting specifically on monoglutamates. The enzyme is involved in the tetrahydrofolate metabolism and located to the vacuole.; gamma-glutamyl hydrolase 2 (GGH2); CONTAINS InterPro DOMAIN/s: Peptidase C26, gamma-glutamyl hydrolase (InterPro:IPR015527), Peptidase C26 (InterPro:IPR011697); BEST Arabidopsis thaliana protein match is: gamma-glutamyl hydrolase 1 (TAIR:AT1G78660.2). & (gnl|cdd|36772 : 186.0) no description available & (p93164|ggh_soybn : 149.0) Gamma-glutamyl hydrolase precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase) (Conjugase) (GH) - Glycine max (Soybean) & (gnl|cdd|28859 : 145.0) no description available & (reliability: 372.0) & (original description: Putative BnaC06g39060D, Description = BnaC06g39060D protein, PFAM = )' T '29.5' 'protein.degradation' 'niben044scf00018402ctg000_1-7335' '(at5g22850 : 647.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G08210.1); Has 4888 Blast hits to 4872 proteins in 390 species: Archae - 0; Bacteria - 0; Metazoa - 1696; Fungi - 940; Plants - 1998; Viruses - 1; Other Eukaryotes - 253 (source: NCBI BLink). & (gnl|cdd|36553 : 229.0) no description available & (gnl|cdd|84452 : 121.0) no description available & (q6yny7|asp1_orysa : 115.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 1294.0) & (original description: Putative AP13, Description = Aspartic protease 13, PFAM = PF14543;PF14541)' T '29.5' 'protein.degradation' 'niben044scf00021219ctg001_1-3892' '(at5g20660 : 175.0) Zn-dependent exopeptidases superfamily protein; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 36 Blast hits to 36 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative vp24, Description = Endoplasmic reticulum metallopeptidase 1, PFAM = )' T '29.5' 'protein.degradation' 'niben044scf00023675ctg005_4451-9929' '(at3g26085 : 273.0) CAAX amino terminal protease family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675). & (reliability: 546.0) & (original description: Putative BnaC07g23210D, Description = BnaC07g23210D protein, PFAM = PF02517)' T '29.5' 'protein.degradation' 'niben044scf00024264ctg000_1-3537' '(at1g02170 : 254.0) Metacaspase AtMCP1b. Arginine/lysine-specific cysteine protease activity. Induces apoptosis in yeast. Contains Pfam profile PF00656: ICE-like protease (caspase) p20 domain; metacaspase 1 (AMC1); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis, induction of apoptosis; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735), Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 2 (TAIR:AT4G25110.1); Has 1179 Blast hits to 1148 proteins in 266 species: Archae - 3; Bacteria - 262; Metazoa - 3; Fungi - 268; Plants - 419; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|36759 : 252.0) no description available & (gnl|cdd|84933 : 113.0) no description available & (reliability: 508.0) & (original description: Putative AMC1, Description = Metacaspase-1, PFAM = PF00656)' T '29.5' 'protein.degradation' 'niben044scf00025151ctg005_14944-26665' '(at5g22760 : 739.0) PHD finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain (InterPro:IPR004022), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Zinc finger, PHD-type (InterPro:IPR001965), DDT domain superfamily (InterPro:IPR018501), DDT domain, subgroup (InterPro:IPR018500), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: metalloendopeptidases;zinc ion binding;DNA binding (TAIR:AT5G35210.2); Has 3640 Blast hits to 3265 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 2369; Fungi - 398; Plants - 598; Viruses - 0; Other Eukaryotes - 275 (source: NCBI BLink). & (gnl|cdd|36686 : 380.0) no description available & (reliability: 1342.0) & (original description: Putative At5g22760, Description = Putative ovule protein, PFAM = PF15612;PF02791)' T '29.5' 'protein.degradation' 'niben044scf00026864ctg012_1-10860' '(at1g06900 : 727.0) Insulinase (Peptidase family M16) family protein; FUNCTIONS IN: metalloendopeptidase activity, catalytic activity, zinc ion binding, metal ion binding; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) family protein (TAIR:AT2G41790.1); Has 36039 Blast hits to 19499 proteins in 2240 species: Archae - 83; Bacteria - 7236; Metazoa - 10750; Fungi - 4343; Plants - 1987; Viruses - 664; Other Eukaryotes - 10976 (source: NCBI BLink). & (gnl|cdd|36177 : 420.0) no description available & (gnl|cdd|31228 : 272.0) no description available & (reliability: 1454.0) & (original description: Putative At1g06900, Description = Insulin-degrading enzyme, PFAM = PF05193;PF16187)' T '29.5' 'protein.degradation' 'niben044scf00027935ctg005_1-1983' '(at5g20660 : 99.4) Zn-dependent exopeptidases superfamily protein; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 36 Blast hits to 36 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 198.8) & (original description: Putative At5g20655, Description = Endoplasmic reticulum metallopeptidase 1, PFAM = )' T '29.5' 'protein.degradation' 'niben044scf00028918ctg006_1088-8127' '(at5g05740 : 507.0) S2P-like putative metalloprotease, also contain transmembrane helices near their C-termini and many of them, five of seven, contain a conserved zinc-binding motif HEXXH. Homolog of EGY1. Each of the EGY1 and EGY-like proteins share two additional highly conserved motifs, the previously reported NPDG motif (aa 442ñ454 in EGY1, Rudner et al., 1999) and a newly defined GNLR motif (aa 171ñ179 in EGY1). The GNLR motif is a novel signature motif unique to EGY1 and EGY-like proteins as well as other EGY1 orthologs found in cyanobacteria.; ethylene-dependent gravitropism-deficient and yellow-green-like 2 (EGY2); FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M50 (InterPro:IPR008915); BEST Arabidopsis thaliana protein match is: Peptidase M50 family protein (TAIR:AT5G35220.1). & (reliability: 1014.0) & (original description: Putative EGY2, Description = Peptidase M50, PFAM = )' T '29.5' 'protein.degradation' 'niben044scf00031674ctg000_2341-9729' '(at1g67690 : 415.0) Zincin-like metalloproteases family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M3A/M3B, thimet/oligopeptidase F (InterPro:IPR001567); BEST Arabidopsis thaliana protein match is: Zincin-like metalloproteases family protein (TAIR:AT5G51540.1); Has 5194 Blast hits to 5176 proteins in 1382 species: Archae - 6; Bacteria - 3154; Metazoa - 337; Fungi - 406; Plants - 147; Viruses - 0; Other Eukaryotes - 1144 (source: NCBI BLink). & (gnl|cdd|37300 : 322.0) no description available & (gnl|cdd|30687 : 239.0) no description available & (reliability: 830.0) & (original description: Putative nln, Description = Thimet oligopeptidase, PFAM = PF01432)' T '29.5' 'protein.degradation' 'niben044scf00035415ctg004_1-3363' '(at1g71696 : 298.0) Encodes a Putative Zn2+ carboxypeptidase, 4 splice variants have been identified but not characterized for different functions and/or expression patterns.SOL1 isolated as a suppressor of root- specific overexpression of CLE19, a clavata3 like gene. sol1 partially suppresses the short root phenotype caused by CLE19 overexpression.; SUPPRESSOR OF LLP1 1 (SOL1); FUNCTIONS IN: metallocarboxypeptidase activity, carboxypeptidase activity, zinc ion binding; INVOLVED IN: regulation of root meristem growth; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Carboxypeptidase-like, regulatory domain (InterPro:IPR008969), Peptidase M14, carboxypeptidase A (InterPro:IPR000834), Carboxypeptidase, regulatory domain (InterPro:IPR014766); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37860 : 221.0) no description available & (gnl|cdd|84641 : 102.0) no description available & (reliability: 596.0) & (original description: Putative Os06g0144600, Description = Os06g0144600 protein, PFAM = PF00246)' T '29.5' 'protein.degradation' 'niben044scf00035591ctg004_4058-15594' '(at3g54720 : 708.0) Encodes glutamate carboxypeptidase. Various alleles show-increased cotyledon number and rate of leaf initiation, show transformation of leaves to cotyledons, altered flowering time and photomorphogenesis and an increased level of cytokinin biosynthesis. Involved in ethylene enhanced hypocotyl elongation in the light. Strong genetic interaction between TGH and AMP1.; ALTERED MERISTEM PROGRAM 1 (AMP1); CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Transferrin receptor-like, dimerisation (InterPro:IPR007365), Peptidase M28 (InterPro:IPR007484); BEST Arabidopsis thaliana protein match is: Peptidase M28 family protein (TAIR:AT5G19740.1); Has 3363 Blast hits to 3338 proteins in 594 species: Archae - 10; Bacteria - 1310; Metazoa - 699; Fungi - 446; Plants - 316; Viruses - 0; Other Eukaryotes - 582 (source: NCBI BLink). & (gnl|cdd|37406 : 468.0) no description available & (gnl|cdd|80343 : 136.0) no description available & (reliability: 1416.0) & (original description: Putative AMP1, Description = Probable glutamate carboxypeptidase 2, PFAM = PF04253;PF04389)' T '29.5' 'protein.degradation' 'niben044scf00037461ctg002_1318-8772' '(at1g14270 : 278.0) CAAX amino terminal protease family protein; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: CAAX amino terminal protease family protein (TAIR:AT5G60750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 556.0) & (original description: Putative BnaA06g09050D, Description = BnaA06g09050D protein, PFAM = PF02517)' T '29.5' 'protein.degradation' 'niben044scf00037462ctg008_1-3550' '(at5g22860 : 447.0) Serine carboxypeptidase S28 family protein; FUNCTIONS IN: serine-type peptidase activity, peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S28 (InterPro:IPR008758); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G24280.1); Has 1206 Blast hits to 1180 proteins in 169 species: Archae - 0; Bacteria - 11; Metazoa - 595; Fungi - 183; Plants - 236; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|37394 : 413.0) no description available & (gnl|cdd|86891 : 204.0) no description available & (reliability: 894.0) & (original description: Putative BnaC03g11000D, Description = BnaC03g11000D protein, PFAM = PF05577)' T '29.5' 'protein.degradation' 'niben044scf00038096ctg008_12286-24458' '(at4g01320 : 457.0) CAAX protease with broad substrate specificity. Localized exclusively to the endoplasmic reticulum.; ATSTE24; FUNCTIONS IN: endopeptidase activity, metalloendopeptidase activity; INVOLVED IN: CAAX-box protein maturation, proteolysis; LOCATED IN: endoplasmic reticulum, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M48 (InterPro:IPR001915); Has 2991 Blast hits to 2984 proteins in 996 species: Archae - 162; Bacteria - 1572; Metazoa - 206; Fungi - 172; Plants - 49; Viruses - 0; Other Eukaryotes - 830 (source: NCBI BLink). & (gnl|cdd|37930 : 332.0) no description available & (gnl|cdd|85452 : 93.5) no description available & (reliability: 914.0) & (original description: Putative afc1, Description = CAAX prenyl protease 1, PFAM = PF01435;PF16491)' T '29.5' 'protein.degradation' 'niben044scf00039494ctg004_1388-10485' '(at4g11740 : 334.0) Isolated as a suppressor of a dominant mutant in the Ara4 gene that was expressed in yeast ypt1 mutant strains. A novel protein with a small region of similarity to coil-coiled domain of yeast VSP27 protein.; SAY1; INVOLVED IN: vesicle-mediated transport; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012), Ubiquitin interacting motif (InterPro:IPR003903), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G23040.1); Has 5504 Blast hits to 4000 proteins in 512 species: Archae - 3; Bacteria - 644; Metazoa - 2099; Fungi - 780; Plants - 360; Viruses - 48; Other Eukaryotes - 1570 (source: NCBI BLink). & (gnl|cdd|36577 : 144.0) no description available & (reliability: 636.0) & (original description: Putative PUX8, Description = Plant UBX domain-containing protein 8, PFAM = PF14555;PF00789)' T '29.5' 'protein.degradation' 'niben044scf00039863ctg002_1-3792' '(at1g71696 : 256.0) Encodes a Putative Zn2+ carboxypeptidase, 4 splice variants have been identified but not characterized for different functions and/or expression patterns.SOL1 isolated as a suppressor of root- specific overexpression of CLE19, a clavata3 like gene. sol1 partially suppresses the short root phenotype caused by CLE19 overexpression.; SUPPRESSOR OF LLP1 1 (SOL1); FUNCTIONS IN: metallocarboxypeptidase activity, carboxypeptidase activity, zinc ion binding; INVOLVED IN: regulation of root meristem growth; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Carboxypeptidase-like, regulatory domain (InterPro:IPR008969), Peptidase M14, carboxypeptidase A (InterPro:IPR000834), Carboxypeptidase, regulatory domain (InterPro:IPR014766); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37860 : 185.0) no description available & (gnl|cdd|84641 : 97.8) no description available & (reliability: 512.0) & (original description: Putative CBPD, Description = Carboxypeptidase D, PFAM = PF00246)' T '29.5' 'protein.degradation' 'niben044scf00042787ctg003_1-7054' '(at5g35220 : 705.0) Membrane-associated and ATP-independent metalloprotease; EGY1 protein contains eight trans-membrane domains at its C-terminus, and carries out beta-casein degradation in an ATP-independent manner. EGY1 is required for development of both thylakoid grana and a well-organized lamellae system in chloroplast. Additionally, EGY1 is required for the accumulation of chlorophyll and chlorophyll a/b binding (CAB) proteins (both PS I and PS II) in chloroplast membranes, and for grana formation and normal chloroplast development. Loss of EGY1 function also has an effect on endodermal plastid biogenesis.; ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN 1 (EGY1); FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: in 9 processes; LOCATED IN: chloroplast, membrane; EXPRESSED IN: hypocotyl endodermis, flower, peduncle, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Peptidase M50 (InterPro:IPR008915); BEST Arabidopsis thaliana protein match is: metalloendopeptidases;zinc ion binding;DNA binding (TAIR:AT5G35210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1410.0) & (original description: Putative DDP1, Description = Peptidase M50, PFAM = )' T '29.5' 'protein.degradation' 'niben044scf00048621ctg004_774-7946' '(at2g31870 : 540.0) mutant has Long free-running circadian period; Poly (ADP-ribose) Glycohydrolase; Sanskrit for 'bright' (TEJ); CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) glycohydrolase (InterPro:IPR007724); BEST Arabidopsis thaliana protein match is: poly(ADP-ribose) glycohydrolase 2 (TAIR:AT2G31865.2); Has 549 Blast hits to 374 proteins in 97 species: Archae - 0; Bacteria - 0; Metazoa - 324; Fungi - 12; Plants - 58; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|37275 : 348.0) no description available & (gnl|cdd|68596 : 339.0) no description available & (reliability: 1080.0) & (original description: Putative PARG1, Description = Poly(ADP-ribose) glycohydrolase 1, PFAM = PF05028)' T '29.5' 'protein.degradation' 'niben101scf00069_1209302-1222060' '(at5g65620 : 1169.0) Zincin-like metalloproteases family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cytosol, chloroplast, chloroplast stroma; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M3A/M3B, thimet/oligopeptidase F (InterPro:IPR001567); BEST Arabidopsis thaliana protein match is: Zincin-like metalloproteases family protein (TAIR:AT5G10540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37300 : 801.0) no description available & (gnl|cdd|30687 : 759.0) no description available & (reliability: 2338.0) & (original description: Putative OOP, Description = Organellar oligopeptidase A, chloroplastic/mitochondrial, PFAM = PF01432)' T '29.5' 'protein.degradation' 'niben101scf00085_379514-387570' '(at5g25950 : 271.0) Protein of Unknown Function (DUF239); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT5G25960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66735 : 199.0) no description available & (reliability: 512.0) & (original description: Putative BnaA06g27990D, Description = BnaA06g27990D protein, PFAM = PF03080;PF14365)' T '29.5' 'protein.degradation' 'niben101scf00159_957780-976395' '(at2g01470 : 313.0) Sec12p-like protein (GTP exchange protein) that functionally complements yeast sec12 null mutant. Protein is localized to the ER.; SEC12P-like 2 protein (STL2P); FUNCTIONS IN: nucleotide binding; INVOLVED IN: ER to Golgi vesicle-mediated transport; LOCATED IN: integral to endoplasmic reticulum membrane, endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G50550.1); Has 6374 Blast hits to 3814 proteins in 364 species: Archae - 22; Bacteria - 2789; Metazoa - 1016; Fungi - 1422; Plants - 400; Viruses - 0; Other Eukaryotes - 725 (source: NCBI BLink). & (gnl|cdd|35990 : 264.0) no description available & (gnl|cdd|29257 : 93.5) no description available & (reliability: 626.0) & (original description: Putative STL2P, Description = SEC12-like protein 2, PFAM = PF12894)' T '29.5' 'protein.degradation' 'niben101scf00160_1057810-1071624' '(at1g78680 : 411.0) The Arabidopsis protein AtGGH2 is a gamma-glutamyl hydrolase acting specifically on monoglutamates. The enzyme is involved in the tetrahydrofolate metabolism and located to the vacuole.; gamma-glutamyl hydrolase 2 (GGH2); CONTAINS InterPro DOMAIN/s: Peptidase C26, gamma-glutamyl hydrolase (InterPro:IPR015527), Peptidase C26 (InterPro:IPR011697); BEST Arabidopsis thaliana protein match is: gamma-glutamyl hydrolase 1 (TAIR:AT1G78660.2). & (gnl|cdd|36772 : 406.0) no description available & (p93164|ggh_soybn : 333.0) Gamma-glutamyl hydrolase precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase) (Conjugase) (GH) - Glycine max (Soybean) & (gnl|cdd|28859 : 307.0) no description available & (reliability: 822.0) & (original description: Putative GGH2, Description = Gamma-glutamyl hydrolase 2, PFAM = PF07722)' T '29.5' 'protein.degradation' 'niben101scf00165_7159-10529' '(at3g52500 : 416.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G45120.1); Has 2297 Blast hits to 2281 proteins in 180 species: Archae - 0; Bacteria - 0; Metazoa - 245; Fungi - 122; Plants - 1871; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|36553 : 184.0) no description available & (reliability: 832.0) & (original description: Putative API1, Description = Aspartic protease, PFAM = PF14541;PF14543)' T '29.5' 'protein.degradation' 'niben101scf00180_693672-699642' '(at1g11080 : 659.0) serine carboxypeptidase-like 31 (scpl31); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 30 (TAIR:AT4G15100.1). & (gnl|cdd|36496 : 518.0) no description available & (gnl|cdd|84781 : 450.0) no description available & (p08818|cbp2_horvu : 410.0) Serine carboxypeptidase 2 precursor (EC 3.4.16.6) (Serine carboxypeptidase II) (Carboxypeptidase D) (CP-MII) [Contains: Serine carboxypeptidase 2 chain A (Serine carboxypeptidase II chain A); Serine carboxypeptidase 2 chain B (Serine ca & (reliability: 1206.0) & (original description: Putative SCPL31, Description = Serine carboxypeptidase-like 31, PFAM = PF00450)' T '29.5' 'protein.degradation' 'niben101scf00229_197488-208586' '(at2g37660 : 444.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: defense response to bacterium; LOCATED IN: thylakoid, apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 3-beta hydroxysteroid dehydrogenase/isomerase (InterPro:IPR002225), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G02240.1); Has 2691 Blast hits to 2647 proteins in 745 species: Archae - 56; Bacteria - 1822; Metazoa - 3; Fungi - 41; Plants - 459; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink). & (gnl|cdd|36417 : 226.0) no description available & (reliability: 814.0) & (original description: Putative At2g37660, Description = Uncharacterized protein At2g37660, chloroplastic, PFAM = PF13460)' T '29.5' 'protein.degradation' 'niben101scf00229_198613-201226' '(at2g37660 : 243.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: defense response to bacterium; LOCATED IN: thylakoid, apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 3-beta hydroxysteroid dehydrogenase/isomerase (InterPro:IPR002225), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G02240.1); Has 2691 Blast hits to 2647 proteins in 745 species: Archae - 56; Bacteria - 1822; Metazoa - 3; Fungi - 41; Plants - 459; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink). & (gnl|cdd|36417 : 120.0) no description available & (reliability: 446.0) & (original description: Putative SARED1, Description = Os05g0110300 protein, PFAM = PF13460)' T '29.5' 'protein.degradation' 'niben101scf00248_224927-232379' '(at4g14570 : 875.0) acylaminoacyl-peptidase-related; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G36210.1); Has 9037 Blast hits to 9017 proteins in 1444 species: Archae - 238; Bacteria - 5246; Metazoa - 1023; Fungi - 365; Plants - 298; Viruses - 0; Other Eukaryotes - 1867 (source: NCBI BLink). & (gnl|cdd|31695 : 164.0) no description available & (gnl|cdd|37311 : 147.0) no description available & (reliability: 1750.0) & (original description: Putative AARE, Description = Acylamino-acid-releasing enzyme, PFAM = PF00326;PF07676)' T '29.5' 'protein.degradation' 'niben101scf00270_345080-368650' '(gnl|cdd|37718 : 241.0) no description available & (at2g43210 : 183.0) Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012); Has 1416 Blast hits to 1005 proteins in 245 species: Archae - 0; Bacteria - 142; Metazoa - 386; Fungi - 259; Plants - 165; Viruses - 17; Other Eukaryotes - 447 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative PUX11, Description = Plant UBX domain-containing protein 11, PFAM = PF00789)' T '29.5' 'protein.degradation' 'niben101scf00321_169557-177560' '(at5g36210 : 905.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375); BEST Arabidopsis thaliana protein match is: acylaminoacyl-peptidase-related (TAIR:AT4G14570.1); Has 7796 Blast hits to 7784 proteins in 1167 species: Archae - 215; Bacteria - 4533; Metazoa - 751; Fungi - 258; Plants - 220; Viruses - 0; Other Eukaryotes - 1819 (source: NCBI BLink). & (gnl|cdd|37311 : 224.0) no description available & (gnl|cdd|31695 : 207.0) no description available & (reliability: 1810.0) & (original description: Putative ptpA, Description = Prolyl tripeptidyl peptidase, PFAM = PF00326)' T '29.5' 'protein.degradation' 'niben101scf00370_280699-285741' '(at5g27430 : 254.0) Signal peptidase subunit; FUNCTIONS IN: peptidase activity; INVOLVED IN: signal peptide processing; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Signal peptidase 22kDa subunit (InterPro:IPR007653); BEST Arabidopsis thaliana protein match is: Signal peptidase subunit (TAIR:AT3G05230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38582 : 192.0) no description available & (gnl|cdd|68156 : 170.0) no description available & (q9lgb4|spcs3_orysa : 114.0) Probable signal peptidase complex subunit 3 (EC 3.4.-.-) (Microsomal signal peptidase 22 kDa subunit) (SPase 22 kDa subunit) (SPC22) - Oryza sativa (Rice) & (reliability: 488.0) & (original description: Putative At5g27430, Description = Signal peptidase complex subunit 3B, PFAM = PF04573)' T '29.5' 'protein.degradation' 'niben101scf00410_276435-283824' '(at4g23860 : 288.0) PHD finger protein-related; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, N-recognin (InterPro:IPR003126); Has 484 Blast hits to 449 proteins in 164 species: Archae - 0; Bacteria - 2; Metazoa - 240; Fungi - 124; Plants - 56; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|37963 : 265.0) no description available & (reliability: 576.0) & (original description: Putative UBR7, Description = UBR7 protein, PFAM = PF02207)' T '29.5' 'protein.degradation' 'niben101scf00416_10710-21095' '(at2g31870 : 622.0) mutant has Long free-running circadian period; Poly (ADP-ribose) Glycohydrolase; Sanskrit for 'bright' (TEJ); CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) glycohydrolase (InterPro:IPR007724); BEST Arabidopsis thaliana protein match is: poly(ADP-ribose) glycohydrolase 2 (TAIR:AT2G31865.2); Has 549 Blast hits to 374 proteins in 97 species: Archae - 0; Bacteria - 0; Metazoa - 324; Fungi - 12; Plants - 58; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|37275 : 353.0) no description available & (gnl|cdd|68596 : 334.0) no description available & (reliability: 1244.0) & (original description: Putative PARG1, Description = Poly(ADP-ribose) glycohydrolase 1, PFAM = PF05028)' T '29.5' 'protein.degradation' 'niben101scf00454_639685-647302' '(at1g02170 : 442.0) Metacaspase AtMCP1b. Arginine/lysine-specific cysteine protease activity. Induces apoptosis in yeast. Contains Pfam profile PF00656: ICE-like protease (caspase) p20 domain; metacaspase 1 (AMC1); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis, induction of apoptosis; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735), Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 2 (TAIR:AT4G25110.1); Has 1179 Blast hits to 1148 proteins in 266 species: Archae - 3; Bacteria - 262; Metazoa - 3; Fungi - 268; Plants - 419; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|36759 : 353.0) no description available & (gnl|cdd|84933 : 140.0) no description available & (reliability: 884.0) & (original description: Putative AMC1, Description = Metacaspase-1, PFAM = PF00656)' T '29.5' 'protein.degradation' 'niben101scf00682_563724-572330' '(at2g36670 : 583.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G22850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36553 : 224.0) no description available & (gnl|cdd|84452 : 112.0) no description available & (q6yny7|asp1_orysa : 93.6) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 1142.0) & (original description: Putative AP26, Description = Aspartic proteinase, PFAM = PF14543;PF14541)' T '29.5' 'protein.degradation' 'niben101scf00714_812323-827599' '(at4g22720 : 645.0) Actin-like ATPase superfamily protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M22, glycoprotease (InterPro:IPR000905), Peptidase M22, glycoprotease, subgroup (InterPro:IPR017861); BEST Arabidopsis thaliana protein match is: glycoprotease 1 (TAIR:AT2G45270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37919 : 616.0) no description available & (gnl|cdd|83106 : 428.0) no description available & (reliability: 1290.0) & (original description: Putative osgep, Description = Probable tRNA N6-adenosine threonylcarbamoyltransferase, PFAM = PF00814)' T '29.5' 'protein.degradation' 'niben101scf00769_67675-77705' '(at4g33090 : 1348.0) encodes an aminopeptidase, a ortholog of mouse microsomal AP (EC 3.4.11.2).; aminopeptidase M1 (APM1); FUNCTIONS IN: aminopeptidase activity; INVOLVED IN: auxin polar transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, puromycin-sensitive aminopeptidase (InterPro:IPR015568), Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782); BEST Arabidopsis thaliana protein match is: Peptidase M1 family protein (TAIR:AT1G63770.3); Has 9205 Blast hits to 9101 proteins in 1870 species: Archae - 122; Bacteria - 4443; Metazoa - 2260; Fungi - 495; Plants - 237; Viruses - 0; Other Eukaryotes - 1648 (source: NCBI BLink). & (gnl|cdd|36264 : 771.0) no description available & (gnl|cdd|30656 : 447.0) no description available & (reliability: 2696.0) & (original description: Putative APM1, Description = Aminopeptidase M1, PFAM = PF11838;PF01433)' T '29.5' 'protein.degradation' 'niben101scf00837_115658-124348' '(at1g76140 : 1173.0) Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106), Peptidase S9A, prolyl oligopeptidase (InterPro:IPR002470); BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT1G20380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37448 : 914.0) no description available & (gnl|cdd|31694 : 490.0) no description available & (reliability: 2346.0) & (original description: Putative PREP, Description = Prolyl endopeptidase, PFAM = PF00326;PF02897)' T '29.5' 'protein.degradation' 'niben101scf00885_209573-217052' '(at4g18370 : 355.0) Encodes DEG5. Forms a hexamer with DEG8 in the thylakoid lumen. Involved in the cleavage of photodamaged D2 protein of photosystem II (PSII).; DEGP protease 5 (DEG5); FUNCTIONS IN: serine-type peptidase activity, catalytic activity, serine-type endopeptidase activity; INVOLVED IN: photosystem II repair, proteolysis; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254); BEST Arabidopsis thaliana protein match is: DegP protease 1 (TAIR:AT3G27925.1); Has 15121 Blast hits to 15118 proteins in 2570 species: Archae - 102; Bacteria - 10211; Metazoa - 307; Fungi - 110; Plants - 358; Viruses - 2; Other Eukaryotes - 4031 (source: NCBI BLink). & (gnl|cdd|36534 : 183.0) no description available & (gnl|cdd|30614 : 144.0) no description available & (reliability: 710.0) & (original description: Putative deg8, Description = 2-alkenal reductase, PFAM = PF13365)' T '29.5' 'protein.degradation' 'niben101scf00929_403508-409337' '(at4g36800 : 336.0) RUB1 conjugating enzyme that conjugates CUL1 and is involved in auxin response and embryogenesis. RCE1 protein physically interacts with RBX1, which may be the E3 for CUL1.; RUB1 conjugating enzyme 1 (RCE1); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), RUB1 conjugating enzyme Ubc12 (InterPro:IPR015580); BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein (TAIR:AT2G18600.1); Has 8473 Blast hits to 8470 proteins in 386 species: Archae - 0; Bacteria - 0; Metazoa - 3871; Fungi - 1731; Plants - 1533; Viruses - 20; Other Eukaryotes - 1318 (source: NCBI BLink). & (gnl|cdd|35641 : 282.0) no description available & (gnl|cdd|84587 : 146.0) no description available & (p35130|ubc2_medsa : 83.6) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (reliability: 642.0) & (original description: Putative RCE1, Description = NEDD8-conjugating enzyme Ubc12, PFAM = PF00179)' T '29.5' 'protein.degradation' 'niben101scf00966_323740-331916' '(at1g14270 : 285.0) CAAX amino terminal protease family protein; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: CAAX amino terminal protease family protein (TAIR:AT5G60750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 570.0) & (original description: Putative BnaA06g09050D, Description = BnaA06g09050D protein, PFAM = PF02517)' T '29.5' 'protein.degradation' 'niben101scf01037_115359-121362' '(at4g04210 : 320.0) Arabidopsis thaliana CDC48-interacting UBX-domain protein (PUX4); plant UBX domain containing protein 4 (PUX4); INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012), SEP domain (InterPro:IPR012989); BEST Arabidopsis thaliana protein match is: plant UBX domain-containing protein 3 (TAIR:AT4G22150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37297 : 278.0) no description available & (gnl|cdd|47854 : 108.0) no description available & (reliability: 640.0) & (original description: Putative PUX5, Description = Plant UBX domain-containing protein 5, PFAM = PF14555;PF08059;PF00789)' T '29.5' 'protein.degradation' 'niben101scf01068_558636-568385' '(at1g79210 : 422.0) N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; FUNCTIONS IN: endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: defense response to bacterium, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: proteasome subunit PAB1 (TAIR:AT1G16470.2); Has 6770 Blast hits to 6769 proteins in 496 species: Archae - 887; Bacteria - 41; Metazoa - 2415; Fungi - 1555; Plants - 857; Viruses - 0; Other Eukaryotes - 1015 (source: NCBI BLink). & (q9lsu2|psa2_orysa : 411.0) Proteasome subunit alpha type 2 (EC 3.4.25.1) (20S proteasome alpha subunit B) (20S proteasome subunit alpha-2) - Oryza sativa (Rice) & (gnl|cdd|48448 : 402.0) no description available & (gnl|cdd|35402 : 372.0) no description available & (reliability: 844.0) & (original description: Putative PAB1, Description = Proteasome subunit alpha type-2-A, PFAM = PF10584;PF00227)' T '29.5' 'protein.degradation' 'niben101scf01124_2203997-2210855' '(at3g57680 : 674.0) Peptidase S41 family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis, intracellular signaling pathway; LOCATED IN: chloroplast thylakoid lumen, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S41 (InterPro:IPR005151), PDZ/DHR/GLGF (InterPro:IPR001478), Peptidase S41A, C-terminal peptidase (InterPro:IPR004447); BEST Arabidopsis thaliana protein match is: Peptidase S41 family protein (TAIR:AT4G17740.2); Has 8999 Blast hits to 8993 proteins in 1973 species: Archae - 1; Bacteria - 5400; Metazoa - 54; Fungi - 0; Plants - 152; Viruses - 0; Other Eukaryotes - 3392 (source: NCBI BLink). & (gnl|cdd|31136 : 285.0) no description available & (reliability: 1348.0) & (original description: Putative CTPA3, Description = Carboxyl-terminal-processing peptidase 3, chloroplastic, PFAM = PF03572;PF00595)' T '29.5' 'protein.degradation' 'niben101scf01146_134772-151550' '(at4g29330 : 345.0) DERLIN-1 (DER1); CONTAINS InterPro DOMAIN/s: Der1-like (InterPro:IPR007599); BEST Arabidopsis thaliana protein match is: DERLIN-2.2 (TAIR:AT4G04860.1); Has 918 Blast hits to 916 proteins in 241 species: Archae - 0; Bacteria - 22; Metazoa - 340; Fungi - 200; Plants - 147; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink). & (q06397|derl1_orysa : 316.0) Derlin-1 (DER1-like protein 1) (OsDerlin 1-1) (18 kDa cold-induced protein) - Oryza sativa (Rice) & (gnl|cdd|36076 : 214.0) no description available & (gnl|cdd|86674 : 151.0) no description available & (reliability: 690.0) & (original description: Putative DER1, Description = Derlin-1, PFAM = PF04511)' T '29.5' 'protein.degradation' 'niben101scf01214_261540-269764' '(at4g10790 : 514.0) UBX domain-containing protein; CONTAINS InterPro DOMAIN/s: UAS (InterPro:IPR006577), UBX (InterPro:IPR001012); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G23040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36577 : 253.0) no description available & (gnl|cdd|47890 : 131.0) no description available & (reliability: 1028.0) & (original description: Putative PUX10, Description = Plant UBX domain-containing protein 10, PFAM = PF14555;PF00789)' T '29.5' 'protein.degradation' 'niben101scf01318_128899-135686' '(at5g05740 : 501.0) S2P-like putative metalloprotease, also contain transmembrane helices near their C-termini and many of them, five of seven, contain a conserved zinc-binding motif HEXXH. Homolog of EGY1. Each of the EGY1 and EGY-like proteins share two additional highly conserved motifs, the previously reported NPDG motif (aa 442ñ454 in EGY1, Rudner et al., 1999) and a newly defined GNLR motif (aa 171ñ179 in EGY1). The GNLR motif is a novel signature motif unique to EGY1 and EGY-like proteins as well as other EGY1 orthologs found in cyanobacteria.; ethylene-dependent gravitropism-deficient and yellow-green-like 2 (EGY2); FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M50 (InterPro:IPR008915); BEST Arabidopsis thaliana protein match is: Peptidase M50 family protein (TAIR:AT5G35220.1). & (reliability: 1002.0) & (original description: Putative EGY2, Description = Peptidase M50, PFAM = )' T '29.5' 'protein.degradation' 'niben101scf01376_475506-481285' '(at1g79340 : 498.0) metacaspase 4 (MC4); FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 5 (TAIR:AT1G79330.1); Has 1195 Blast hits to 1161 proteins in 285 species: Archae - 6; Bacteria - 340; Metazoa - 3; Fungi - 271; Plants - 332; Viruses - 0; Other Eukaryotes - 243 (source: NCBI BLink). & (gnl|cdd|36759 : 250.0) no description available & (gnl|cdd|84933 : 121.0) no description available & (reliability: 996.0) & (original description: Putative AMC4, Description = Metacaspase-4, PFAM = PF00656)' T '29.5' 'protein.degradation' 'niben101scf01423_420192-429943' '(at1g69020 : 764.0) Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106), Peptidase S9A, prolyl oligopeptidase (InterPro:IPR002470); BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT5G66960.1); Has 6703 Blast hits to 6563 proteins in 1132 species: Archae - 51; Bacteria - 2817; Metazoa - 295; Fungi - 25; Plants - 196; Viruses - 0; Other Eukaryotes - 3319 (source: NCBI BLink). & (gnl|cdd|37448 : 629.0) no description available & (gnl|cdd|31956 : 517.0) no description available & (reliability: 1528.0) & (original description: Putative At1g69020, Description = Protease 2, PFAM = PF02897;PF00326)' T '29.5' 'protein.degradation' 'niben101scf01434_150324-162832' '(at3g05350 : 978.0) Metallopeptidase M24 family protein; FUNCTIONS IN: hydrolase activity, aminopeptidase activity; INVOLVED IN: proteolysis, cellular process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24, structural domain (InterPro:IPR000994), Creatinase (InterPro:IPR000587); BEST Arabidopsis thaliana protein match is: aminopeptidase P1 (TAIR:AT4G36760.1); Has 11788 Blast hits to 11217 proteins in 2602 species: Archae - 275; Bacteria - 7526; Metazoa - 334; Fungi - 310; Plants - 154; Viruses - 0; Other Eukaryotes - 3189 (source: NCBI BLink). & (gnl|cdd|37624 : 745.0) no description available & (gnl|cdd|29970 : 345.0) no description available & (reliability: 1956.0) & (original description: Putative AMPP, Description = Probable Xaa-Pro aminopeptidase P, PFAM = PF16189;PF01321;PF16188;PF00557)' T '29.5' 'protein.degradation' 'niben101scf01487_529911-534695' '(at1g06870 : 382.0) Peptidase S24/S26A/S26B/S26C family protein; FUNCTIONS IN: serine-type peptidase activity, peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (InterPro:IPR011056), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927), Peptidase S26A, signal peptidase I, conserved site (InterPro:IPR019758), Peptidase S26, conserved region (InterPro:IPR019533), Peptidase S26A, signal peptidase I (InterPro:IPR000223), Peptidase S26A, signal peptidase I, serine active site (InterPro:IPR019756); BEST Arabidopsis thaliana protein match is: thylakoid processing peptide (TAIR:AT2G30440.1); Has 9578 Blast hits to 9341 proteins in 2371 species: Archae - 0; Bacteria - 7160; Metazoa - 214; Fungi - 105; Plants - 244; Viruses - 0; Other Eukaryotes - 1855 (source: NCBI BLink). & (gnl|cdd|35392 : 169.0) no description available & (reliability: 764.0) & (original description: Putative TPP2, Description = Probable thylakoidal processing peptidase 2, chloroplastic, PFAM = PF10502)' T '29.5' 'protein.degradation' 'niben101scf01511_167056-175923' '(at2g24280 : 733.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: serine-type peptidase activity, serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system, lysosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S28 (InterPro:IPR008758); BEST Arabidopsis thaliana protein match is: Serine carboxypeptidase S28 family protein (TAIR:AT5G65760.1); Has 1253 Blast hits to 1217 proteins in 170 species: Archae - 0; Bacteria - 7; Metazoa - 611; Fungi - 189; Plants - 249; Viruses - 0; Other Eukaryotes - 197 (source: NCBI BLink). & (gnl|cdd|37394 : 608.0) no description available & (gnl|cdd|86891 : 283.0) no description available & (reliability: 1466.0) & (original description: Putative PRCP, Description = Lysosomal Pro-X carboxypeptidase, PFAM = PF05577)' T '29.5' 'protein.degradation' 'niben101scf01534_15427-34954' '(at5g49570 : 861.0) Encodes a protein that has peptide:N-glycanase activity in enzymatic assay in heterologous systems (although the activity was not detected in wild-type plants).; peptide-N-glycanase 1 (PNG1); CONTAINS InterPro DOMAIN/s: Transglutaminase-like (InterPro:IPR002931), DNA repair protein Rad4, transglutaminase-like domain (InterPro:IPR018325), Galactose-binding domain-like (InterPro:IPR008979); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7f0r1|png1_orysa : 532.0) Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase (EC 3.5.1.52) (Peptide:N-glycanase) - Oryza sativa (Rice) & (gnl|cdd|36127 : 434.0) no description available & (reliability: 1722.0) & (original description: Putative PNG1, Description = Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase, PFAM = PF03835)' T '29.5' 'protein.degradation' 'niben101scf01538_394862-399194' '(at1g55360 : 632.0) Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT3G13510.1); Has 753 Blast hits to 700 proteins in 28 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 10; Plants - 728; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66735 : 276.0) no description available & (reliability: 1232.0) & (original description: Putative NIP1, Description = NEP-interacting protein 1, PFAM = PF14365;PF03080)' T '29.5' 'protein.degradation' 'niben101scf01641_20070-23546' '(at4g33490 : 555.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G44130.1). & (q6yny7|asp1_orysa : 317.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (gnl|cdd|36553 : 209.0) no description available & (reliability: 1110.0) & (original description: Putative ASP1, Description = Aspartic proteinase Asp1, PFAM = PF14541;PF14543)' T '29.5' 'protein.degradation' 'niben101scf01655_100821-118346' '(at4g01320 : 677.0) CAAX protease with broad substrate specificity. Localized exclusively to the endoplasmic reticulum.; ATSTE24; FUNCTIONS IN: endopeptidase activity, metalloendopeptidase activity; INVOLVED IN: CAAX-box protein maturation, proteolysis; LOCATED IN: endoplasmic reticulum, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M48 (InterPro:IPR001915); Has 2991 Blast hits to 2984 proteins in 996 species: Archae - 162; Bacteria - 1572; Metazoa - 206; Fungi - 172; Plants - 49; Viruses - 0; Other Eukaryotes - 830 (source: NCBI BLink). & (gnl|cdd|37930 : 438.0) no description available & (gnl|cdd|85452 : 116.0) no description available & (reliability: 1354.0) & (original description: Putative FACE1, Description = CAAX prenyl protease 1 homolog, PFAM = PF01435;PF16491)' T '29.5' 'protein.degradation' 'niben101scf01661_82574-99024' '(at1g73990 : 752.0) Encodes a putative protease SppA (SppA).; signal peptide peptidase (SPPA); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S49, protease IV (InterPro:IPR004634), Peptidase S49 (InterPro:IPR002142), Peptidase S49, SppA (InterPro:IPR004635); Has 9340 Blast hits to 7649 proteins in 1706 species: Archae - 204; Bacteria - 6183; Metazoa - 9; Fungi - 4; Plants - 52; Viruses - 43; Other Eukaryotes - 2845 (source: NCBI BLink). & (gnl|cdd|30961 : 185.0) no description available & (reliability: 1504.0) & (original description: Putative SPPA, Description = Protease 4, PFAM = PF01343;PF01343)' T '29.5' 'protein.degradation' 'niben101scf01661_82649-99304' '(at1g73990 : 855.0) Encodes a putative protease SppA (SppA).; signal peptide peptidase (SPPA); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S49, protease IV (InterPro:IPR004634), Peptidase S49 (InterPro:IPR002142), Peptidase S49, SppA (InterPro:IPR004635); Has 9340 Blast hits to 7649 proteins in 1706 species: Archae - 204; Bacteria - 6183; Metazoa - 9; Fungi - 4; Plants - 52; Viruses - 43; Other Eukaryotes - 2845 (source: NCBI BLink). & (gnl|cdd|30961 : 191.0) no description available & (reliability: 1710.0) & (original description: Putative SPPA, Description = Serine protease SPPA, chloroplastic, PFAM = PF01343;PF01343)' T '29.5' 'protein.degradation' 'niben101scf01701_715552-718406' '(at1g75460 : 347.0) ATP-dependent protease La (LON) domain protein; FUNCTIONS IN: ATP-dependent peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, lon N-terminal (InterPro:IPR003111); BEST Arabidopsis thaliana protein match is: ATP-dependent protease La (LON) domain protein (TAIR:AT1G19740.1); Has 3715 Blast hits to 3715 proteins in 882 species: Archae - 0; Bacteria - 1742; Metazoa - 186; Fungi - 45; Plants - 112; Viruses - 0; Other Eukaryotes - 1630 (source: NCBI BLink). & (gnl|cdd|39361 : 185.0) no description available & (gnl|cdd|32634 : 115.0) no description available & (reliability: 694.0) & (original description: Putative ion, Description = ATP-dependent protease La (LON) domain protein, PFAM = PF02190)' T '29.5' 'protein.degradation' 'niben101scf01721_481177-488535' '(at2g31870 : 587.0) mutant has Long free-running circadian period; Poly (ADP-ribose) Glycohydrolase; Sanskrit for 'bright' (TEJ); CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) glycohydrolase (InterPro:IPR007724); BEST Arabidopsis thaliana protein match is: poly(ADP-ribose) glycohydrolase 2 (TAIR:AT2G31865.2); Has 549 Blast hits to 374 proteins in 97 species: Archae - 0; Bacteria - 0; Metazoa - 324; Fungi - 12; Plants - 58; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|37275 : 350.0) no description available & (gnl|cdd|68596 : 340.0) no description available & (reliability: 1174.0) & (original description: Putative PARG1, Description = Poly(ADP-ribose) glycohydrolase 1, PFAM = PF05028)' T '29.5' 'protein.degradation' 'niben101scf01721_481271-488472' '(at2g31870 : 578.0) mutant has Long free-running circadian period; Poly (ADP-ribose) Glycohydrolase; Sanskrit for 'bright' (TEJ); CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) glycohydrolase (InterPro:IPR007724); BEST Arabidopsis thaliana protein match is: poly(ADP-ribose) glycohydrolase 2 (TAIR:AT2G31865.2); Has 549 Blast hits to 374 proteins in 97 species: Archae - 0; Bacteria - 0; Metazoa - 324; Fungi - 12; Plants - 58; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|37275 : 348.0) no description available & (gnl|cdd|68596 : 340.0) no description available & (reliability: 1156.0) & (original description: Putative BnaA04g18150D, Description = BnaA04g18150D protein, PFAM = PF05028)' T '29.5' 'protein.degradation' 'niben101scf01738_469015-473532' '(p52427|psa4_spiol : 350.0) Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit alpha-3) (Proteasome 27 kDa subunit) - Spinacia oleracea (Spinach) & (at3g22110 : 333.0) Encodes the alpha-3 subunit of 20s proteasome.; 20S proteasome alpha subunit C1 (PAC1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT4G15165.1); Has 7432 Blast hits to 7428 proteins in 553 species: Archae - 896; Bacteria - 261; Metazoa - 2465; Fungi - 1789; Plants - 945; Viruses - 0; Other Eukaryotes - 1076 (source: NCBI BLink). & (gnl|cdd|48450 : 321.0) no description available & (gnl|cdd|35399 : 320.0) no description available & (reliability: 610.0) & (original description: Putative PAC1, Description = Proteasome subunit alpha type-4, PFAM = PF10584;PF00227;PF00227)' T '29.5' 'protein.degradation' 'niben101scf01740_535872-568042' '(at1g67420 : 459.0) Zn-dependent exopeptidases superfamily protein; FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M28 (InterPro:IPR007484); BEST Arabidopsis thaliana protein match is: Zn-dependent exopeptidases superfamily protein (TAIR:AT5G20660.1). & (reliability: 918.0) & (original description: Putative At1g67420, Description = Os07g0295800 protein, PFAM = )' T '29.5' 'protein.degradation' 'niben101scf01740_541248-549771' '(at1g67420 : 116.0) Zn-dependent exopeptidases superfamily protein; FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M28 (InterPro:IPR007484); BEST Arabidopsis thaliana protein match is: Zn-dependent exopeptidases superfamily protein (TAIR:AT5G20660.1). & (reliability: 232.0) & (original description: Putative At1g67420, Description = Os07g0295800 protein, PFAM = )' T '29.5' 'protein.degradation' 'niben101scf01740_547715-550810' '(at1g67420 : 128.0) Zn-dependent exopeptidases superfamily protein; FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M28 (InterPro:IPR007484); BEST Arabidopsis thaliana protein match is: Zn-dependent exopeptidases superfamily protein (TAIR:AT5G20660.1). & (reliability: 256.0) & (original description: Putative At1g67420, Description = Os07g0295800 protein, PFAM = )' T '29.5' 'protein.degradation' 'niben101scf01750_1549928-1553301' '(at3g52500 : 421.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G45120.1); Has 2297 Blast hits to 2281 proteins in 180 species: Archae - 0; Bacteria - 0; Metazoa - 245; Fungi - 122; Plants - 1871; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|36553 : 175.0) no description available & (reliability: 842.0) & (original description: Putative API1, Description = Aspartic protease, PFAM = PF14543;PF14541)' T '29.5' 'protein.degradation' 'niben101scf01784_632692-645680' '(at5g36210 : 996.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375); BEST Arabidopsis thaliana protein match is: acylaminoacyl-peptidase-related (TAIR:AT4G14570.1); Has 7796 Blast hits to 7784 proteins in 1167 species: Archae - 215; Bacteria - 4533; Metazoa - 751; Fungi - 258; Plants - 220; Viruses - 0; Other Eukaryotes - 1819 (source: NCBI BLink). & (gnl|cdd|31695 : 223.0) no description available & (gnl|cdd|37311 : 218.0) no description available & (reliability: 1992.0) & (original description: Putative ptpA, Description = Prolyl tripeptidyl peptidase, PFAM = PF00326)' T '29.5' 'protein.degradation' 'niben101scf01785_437384-446333' '(at5g46390 : 500.0) Peptidase S41 family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis, intracellular signaling pathway; LOCATED IN: chloroplast thylakoid lumen; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S41 (InterPro:IPR005151), PDZ/DHR/GLGF (InterPro:IPR001478), Peptidase S41A, C-terminal peptidase (InterPro:IPR004447); BEST Arabidopsis thaliana protein match is: Peptidase S41 family protein (TAIR:AT3G57680.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|31136 : 243.0) no description available & (reliability: 1000.0) & (original description: Putative CTPA1, Description = Carboxyl-terminal-processing peptidase 1, chloroplastic, PFAM = PF03572)' T '29.5' 'protein.degradation' 'niben101scf01964_191883-199819' '(at1g56700 : 325.0) Peptidase C15, pyroglutamyl peptidase I-like; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C15, pyroglutamyl peptidase I (InterPro:IPR000816), Peptidase C15, pyroglutamyl peptidase I-like (InterPro:IPR016125); BEST Arabidopsis thaliana protein match is: Peptidase C15, pyroglutamyl peptidase I-like (TAIR:AT1G23440.1); Has 1875 Blast hits to 1874 proteins in 806 species: Archae - 109; Bacteria - 1466; Metazoa - 106; Fungi - 18; Plants - 100; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|39952 : 151.0) no description available & (gnl|cdd|29606 : 145.0) no description available & (reliability: 650.0) & (original description: Putative Sb02g040830, Description = Putative uncharacterized protein Sb02g040830, PFAM = PF01470)' T '29.5' 'protein.degradation' 'niben101scf01983_1676082-1685088' '(at1g78660 : 418.0) The Arabidopsis protein AtGGH1 is a gamma-glutamyl hydrolase cleaving pentaglutamates to yield di- and triglutamates. The enzyme is involved in the tetrahydrofolate metabolism and located to the vacuole.; gamma-glutamyl hydrolase 1 (GGH1); CONTAINS InterPro DOMAIN/s: Peptidase C26, gamma-glutamyl hydrolase (InterPro:IPR015527), Peptidase C26 (InterPro:IPR011697); BEST Arabidopsis thaliana protein match is: gamma-glutamyl hydrolase 2 (TAIR:AT1G78680.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36772 : 415.0) no description available & (p93164|ggh_soybn : 360.0) Gamma-glutamyl hydrolase precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase) (Conjugase) (GH) - Glycine max (Soybean) & (gnl|cdd|28859 : 312.0) no description available & (reliability: 836.0) & (original description: Putative GGH1, Description = Gamma-glutamyl hydrolase 1, PFAM = PF07722)' T '29.5' 'protein.degradation' 'niben101scf02033_336364-343334' '(at5g51740 : 560.0) Peptidase family M48 family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M48 (InterPro:IPR001915); Has 6369 Blast hits to 6329 proteins in 1292 species: Archae - 10; Bacteria - 4324; Metazoa - 65; Fungi - 153; Plants - 45; Viruses - 0; Other Eukaryotes - 1772 (source: NCBI BLink). & (gnl|cdd|37872 : 235.0) no description available & (gnl|cdd|85452 : 128.0) no description available & (reliability: 1120.0) & (original description: Putative BnaA10g07780D, Description = BnaA10g07780D protein, PFAM = PF01435)' T '29.5' 'protein.degradation' 'niben101scf02042_141181-145241' '(gnl|cdd|66735 : 127.0) no description available & (at4g15053 : 119.0) Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G10190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative , Description = , PFAM = PF03080)' T '29.5' 'protein.degradation' 'niben101scf02145_171830-177133' '(at4g22150 : 315.0) Arabidopsis thaliana CDC48-interacting UBX-domain protein (PUX3); plant UBX domain-containing protein 3 (PUX3); INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012), SEP domain (InterPro:IPR012989); BEST Arabidopsis thaliana protein match is: plant UBX domain containing protein 4 (TAIR:AT4G04210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37297 : 252.0) no description available & (gnl|cdd|47854 : 111.0) no description available & (reliability: 630.0) & (original description: Putative PUX4, Description = Plant UBX domain-containing protein 4, PFAM = PF08059;PF00789)' T '29.5' 'protein.degradation' 'niben101scf02175_336385-349154' '(at1g76140 : 1170.0) Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106), Peptidase S9A, prolyl oligopeptidase (InterPro:IPR002470); BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT1G20380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37448 : 911.0) no description available & (gnl|cdd|31694 : 486.0) no description available & (reliability: 2340.0) & (original description: Putative POP2, Description = Prolyl oligopeptidase, PFAM = PF00326;PF02897)' T '29.5' 'protein.degradation' 'niben101scf02264_491016-502527' '(at1g01650 : 805.0) SIGNAL PEPTIDE PEPTIDASE-LIKE 4 (SPPL4); FUNCTIONS IN: peptidase activity, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22B, signal peptide peptidase (InterPro:IPR007369); BEST Arabidopsis thaliana protein match is: SIGNAL PEPTIDE PEPTIDASE-LIKE 2 (TAIR:AT1G63690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37653 : 606.0) no description available & (gnl|cdd|67855 : 286.0) no description available & (reliability: 1610.0) & (original description: Putative SPPL4, Description = Signal peptide peptidase-like 4, PFAM = PF02225;PF04258)' T '29.5' 'protein.degradation' 'niben101scf02360_73294-82537' '(at5g24260 : 1013.0) prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9B, dipeptidylpeptidase IV N-terminal (InterPro:IPR002469); BEST Arabidopsis thaliana protein match is: acylaminoacyl-peptidase-related (TAIR:AT4G14570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37492 : 711.0) no description available & (gnl|cdd|85131 : 268.0) no description available & (reliability: 2026.0) & (original description: Putative DPP4, Description = Dipeptidyl-peptidase 4, PFAM = PF00930;PF00326)' T '29.5' 'protein.degradation' 'niben101scf02405_624256-644413' '(at2g36670 : 536.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G22850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36553 : 219.0) no description available & (gnl|cdd|84452 : 114.0) no description available & (q6yny7|asp1_orysa : 94.4) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 1032.0) & (original description: Putative AP13, Description = Aspartic protease 13, PFAM = PF14541;PF14543)' T '29.5' 'protein.degradation' 'niben101scf02408_364168-383064' '(at3g19170 : 1565.0) Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed only in siliques and flowers; presequence protease 1 (PREP1); CONTAINS InterPro DOMAIN/s: Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16C associated (InterPro:IPR013578), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: presequence protease 2 (TAIR:AT1G49630.2). & (gnl|cdd|37230 : 1250.0) no description available & (gnl|cdd|31229 : 800.0) no description available & (reliability: 3116.0) & (original description: Putative PREP1, Description = Presequence protease 1, chloroplastic/mitochondrial, PFAM = PF00675;PF08367;PF05193)' T '29.5' 'protein.degradation' 'niben101scf02494_375012-394995' '(at5g51540 : 971.0) Zincin-like metalloproteases family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast thylakoid membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Peptidase M3A/M3B, thimet/oligopeptidase F (InterPro:IPR001567); BEST Arabidopsis thaliana protein match is: Zincin-like metalloproteases family protein (TAIR:AT1G67690.1); Has 5499 Blast hits to 5482 proteins in 1556 species: Archae - 6; Bacteria - 3417; Metazoa - 330; Fungi - 489; Plants - 134; Viruses - 0; Other Eukaryotes - 1123 (source: NCBI BLink). & (gnl|cdd|37301 : 725.0) no description available & (gnl|cdd|30687 : 394.0) no description available & (reliability: 1942.0) & (original description: Putative MIP, Description = Probable mitochondrial intermediate peptidase, mitochondrial, PFAM = PF01432)' T '29.5' 'protein.degradation' 'niben101scf02549_278998-290614' '(at1g14570 : 456.0) UBX domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UAS (InterPro:IPR006577), Uncharacterised conserved protein UCP037991, UAS, UBX (InterPro:IPR017346), UBX (InterPro:IPR001012), Ubiquitin interacting motif (InterPro:IPR003903), UBA-like (InterPro:IPR009060), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: structural constituent of ribosome (TAIR:AT4G14250.1); Has 596 Blast hits to 582 proteins in 180 species: Archae - 0; Bacteria - 6; Metazoa - 214; Fungi - 136; Plants - 152; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|36578 : 198.0) no description available & (gnl|cdd|48507 : 154.0) no description available & (reliability: 912.0) & (original description: Putative PUX7, Description = Plant UBX domain-containing protein 7, PFAM = PF02809;PF13899;PF14555;PF00789)' T '29.5' 'protein.degradation' 'niben101scf02562_8771-17437' '(p31427|ampl_soltu : 751.0) Leucine aminopeptidase, chloroplast precursor (EC 3.4.11.1) (LAP) (Leucyl aminopeptidase) (Proline aminopeptidase) (EC 3.4.11.5) (Prolyl aminopeptidase) - Solanum tuberosum (Potato) & (at4g30920 : 743.0) Cytosol aminopeptidase family protein; FUNCTIONS IN: manganese ion binding, metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, protein metabolic process; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Peptidase M17, leucyl aminopeptidase, C-terminal (InterPro:IPR000819), Peptidase M17, leucyl aminopeptidase, N-terminal (InterPro:IPR008283), Peptidase M17, leucyl aminopeptidase (InterPro:IPR011356); BEST Arabidopsis thaliana protein match is: Cytosol aminopeptidase family protein (TAIR:AT4G30910.1); Has 9817 Blast hits to 9813 proteins in 2024 species: Archae - 18; Bacteria - 5432; Metazoa - 663; Fungi - 36; Plants - 122; Viruses - 1; Other Eukaryotes - 3545 (source: NCBI BLink). & (gnl|cdd|48344 : 488.0) no description available & (gnl|cdd|37808 : 469.0) no description available & (reliability: 1486.0) & (original description: Putative lap2, Description = Leucine aminopeptidase, PFAM = PF02789;PF00883)' T '29.5' 'protein.degradation' 'niben101scf02576_41276-64208' '(at1g63690 : 822.0) SIGNAL PEPTIDE PEPTIDASE-LIKE 2 (SPPL2); FUNCTIONS IN: peptidase activity, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endosome, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22B, signal peptide peptidase (InterPro:IPR007369); BEST Arabidopsis thaliana protein match is: SIGNAL PEPTIDE PEPTIDASE-LIKE 4 (TAIR:AT1G01650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37653 : 622.0) no description available & (gnl|cdd|67855 : 297.0) no description available & (reliability: 1644.0) & (original description: Putative SPPL2, Description = Signal peptide peptidase-like 2, PFAM = PF02225;PF04258)' T '29.5' 'protein.degradation' 'niben101scf02632_92030-95865' '(at5g26110 : 361.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Kinase-associated endopeptidase 1, Bud32 (InterPro:IPR022495), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38297 : 252.0) no description available & (gnl|cdd|33440 : 202.0) no description available & (reliability: 722.0) & (original description: Putative bud32, Description = TP53-regulating kinase, PFAM = PF00069)' T '29.5' 'protein.degradation' 'niben101scf02637_492711-509505' '(gnl|cdd|66735 : 162.0) no description available & (at2g35250 : 154.0) Protein of Unknown Function (DUF239); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT2G38255.1); Has 696 Blast hits to 665 proteins in 27 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 10; Plants - 675; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF03080;PF14365)' T '29.5' 'protein.degradation' 'niben101scf02637_492775-509730' '(gnl|cdd|66735 : 163.0) no description available & (at2g44210 : 132.0) Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G55360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF03080)' T '29.5' 'protein.degradation' 'niben101scf02735_32384-39508' '(at1g14270 : 348.0) CAAX amino terminal protease family protein; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: CAAX amino terminal protease family protein (TAIR:AT5G60750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 696.0) & (original description: Putative BnaA06g09050D, Description = BnaA06g09050D protein, PFAM = PF02517)' T '29.5' 'protein.degradation' 'niben101scf02792_139900-162383' '(at5g49570 : 823.0) Encodes a protein that has peptide:N-glycanase activity in enzymatic assay in heterologous systems (although the activity was not detected in wild-type plants).; peptide-N-glycanase 1 (PNG1); CONTAINS InterPro DOMAIN/s: Transglutaminase-like (InterPro:IPR002931), DNA repair protein Rad4, transglutaminase-like domain (InterPro:IPR018325), Galactose-binding domain-like (InterPro:IPR008979); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7f0r1|png1_orysa : 517.0) Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase (EC 3.5.1.52) (Peptide:N-glycanase) - Oryza sativa (Rice) & (gnl|cdd|36127 : 417.0) no description available & (reliability: 1646.0) & (original description: Putative PNG1, Description = Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase, PFAM = PF03835)' T '29.5' 'protein.degradation' 'niben101scf02793_612191-618050' '(at5g64240 : 315.0) metacaspase 3 (MC3); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 1 (TAIR:AT1G02170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36759 : 295.0) no description available & (gnl|cdd|84933 : 127.0) no description available & (reliability: 630.0) & (original description: Putative MCA2, Description = Metacaspase 2, PFAM = PF00656)' T '29.5' 'protein.degradation' 'niben101scf02803_446964-454042' '(at3g10410 : 733.0) SERINE CARBOXYPEPTIDASE-LIKE 49 (SCPL49); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 48 (TAIR:AT3G45010.1); Has 3569 Blast hits to 3439 proteins in 342 species: Archae - 0; Bacteria - 147; Metazoa - 678; Fungi - 883; Plants - 1454; Viruses - 0; Other Eukaryotes - 407 (source: NCBI BLink). & (p37891|cbp3_orysa : 704.0) Serine carboxypeptidase 3 precursor (EC 3.4.16.5) (Serine carboxypeptidase III) - Oryza sativa (Rice) & (gnl|cdd|84781 : 439.0) no description available & (gnl|cdd|36496 : 388.0) no description available & (reliability: 1352.0) & (original description: Putative SCPL49, Description = Serine carboxypeptidase-like 49, PFAM = PF00450)' T '29.5' 'protein.degradation' 'niben101scf02816_670643-695266' '(at4g29490 : 801.0) Metallopeptidase M24 family protein; FUNCTIONS IN: manganese ion binding, aminopeptidase activity; INVOLVED IN: cellular process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal (InterPro:IPR007865), Peptidase M24, structural domain (InterPro:IPR000994); BEST Arabidopsis thaliana protein match is: Metallopeptidase M24 family protein (TAIR:AT1G09300.1); Has 11688 Blast hits to 11680 proteins in 2580 species: Archae - 275; Bacteria - 8182; Metazoa - 386; Fungi - 373; Plants - 96; Viruses - 0; Other Eukaryotes - 2376 (source: NCBI BLink). & (gnl|cdd|37948 : 710.0) no description available & (gnl|cdd|29972 : 309.0) no description available & (reliability: 1602.0) & (original description: Putative m24, Description = Metallopeptidase M24 family protein, PFAM = PF00557;PF05195)' T '29.5' 'protein.degradation' 'niben101scf02873_264368-275490' '(at1g16470 : 422.0) Encodes 20S proteasome subunit PAB1 (PAB1).; proteasome subunit PAB1 (PAB1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to zinc ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT1G79210.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9lsu2|psa2_orysa : 411.0) Proteasome subunit alpha type 2 (EC 3.4.25.1) (20S proteasome alpha subunit B) (20S proteasome subunit alpha-2) - Oryza sativa (Rice) & (gnl|cdd|48448 : 402.0) no description available & (gnl|cdd|35402 : 374.0) no description available & (reliability: 844.0) & (original description: Putative PAB1, Description = Proteasome subunit alpha type-2-A, PFAM = PF00227;PF10584)' T '29.5' 'protein.degradation' 'niben101scf02936_515560-522062' '(at2g23000 : 491.0) serine carboxypeptidase-like 10 (scpl10); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 9 (TAIR:AT2G23010.1); Has 3984 Blast hits to 3884 proteins in 449 species: Archae - 0; Bacteria - 475; Metazoa - 640; Fungi - 843; Plants - 1573; Viruses - 0; Other Eukaryotes - 453 (source: NCBI BLink). & (gnl|cdd|36496 : 453.0) no description available & (gnl|cdd|84781 : 419.0) no description available & (p07519|cbp1_horvu : 342.0) Serine carboxypeptidase 1 precursor (EC 3.4.16.5) (Serine carboxypeptidase I) (Carboxypeptidase C) (CP-MI) [Contains: Serine carboxypeptidase 1 chain A (Serine carboxypeptidase I chain A); Serine carboxypeptidase 1 chain B (Serine carbo & (reliability: 972.0) & (original description: Putative SCPL18, Description = Serine carboxypeptidase-like 18, PFAM = PF00450)' T '29.5' 'protein.degradation' 'niben101scf02968_221297-228534' '(at4g22150 : 319.0) Arabidopsis thaliana CDC48-interacting UBX-domain protein (PUX3); plant UBX domain-containing protein 3 (PUX3); INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012), SEP domain (InterPro:IPR012989); BEST Arabidopsis thaliana protein match is: plant UBX domain containing protein 4 (TAIR:AT4G04210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37297 : 292.0) no description available & (gnl|cdd|47854 : 112.0) no description available & (reliability: 638.0) & (original description: Putative PUX3, Description = CDC48-interacting UBX-domain protein 3, PFAM = PF08059;PF14555;PF00789)' T '29.5' 'protein.degradation' 'niben101scf02972_741546-749431' '(at4g10790 : 473.0) UBX domain-containing protein; CONTAINS InterPro DOMAIN/s: UAS (InterPro:IPR006577), UBX (InterPro:IPR001012); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G23040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36577 : 255.0) no description available & (gnl|cdd|47890 : 132.0) no description available & (reliability: 946.0) & (original description: Putative PUX10, Description = Plant UBX domain-containing protein 10, PFAM = PF14555;PF00789)' T '29.5' 'protein.degradation' 'niben101scf03004_369954-377559' '(at4g38220 : 605.0) Peptidase M20/M25/M40 family protein; FUNCTIONS IN: hydrolase activity, metallopeptidase activity, aminoacylase activity; INVOLVED IN: response to zinc ion; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ArgE/DapE/ACY1/CPG2/YscS, conserved site (InterPro:IPR001261), Peptidase M20 (InterPro:IPR002933), N-acyl-L-amino-acid amidohydrolase (InterPro:IPR010159), Peptidase M20, dimerisation (InterPro:IPR011650); BEST Arabidopsis thaliana protein match is: Peptidase M20/M25/M40 family protein (TAIR:AT1G44820.1); Has 7219 Blast hits to 7215 proteins in 1775 species: Archae - 179; Bacteria - 5225; Metazoa - 384; Fungi - 290; Plants - 80; Viruses - 2; Other Eukaryotes - 1059 (source: NCBI BLink). & (gnl|cdd|37486 : 438.0) no description available & (gnl|cdd|30969 : 148.0) no description available & (reliability: 1210.0) & (original description: Putative acy1, Description = Aminoacylase-1, PFAM = PF01546)' T '29.5' 'protein.degradation' 'niben101scf03018_523657-527324' '(at5g04200 : 331.0) metacaspase 9 (MC9); FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: apoplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 6 (TAIR:AT1G79320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36759 : 237.0) no description available & (gnl|cdd|84933 : 92.7) no description available & (reliability: 662.0) & (original description: Putative AMC9, Description = Metacaspase-9, PFAM = PF00656)' T '29.5' 'protein.degradation' 'niben101scf03036_501202-522101' '(at2g43210 : 308.0) Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012); Has 1416 Blast hits to 1005 proteins in 245 species: Archae - 0; Bacteria - 142; Metazoa - 386; Fungi - 259; Plants - 165; Viruses - 17; Other Eukaryotes - 447 (source: NCBI BLink). & (gnl|cdd|37718 : 245.0) no description available & (reliability: 616.0) & (original description: Putative PUX11, Description = Plant UBX domain-containing protein 11, PFAM = PF00789)' T '29.5' 'protein.degradation' 'niben101scf03104_333424-340060' '(at4g04860 : 392.0) DERLIN-2.2 (DER2.2); CONTAINS InterPro DOMAIN/s: Der1-like (InterPro:IPR007599); BEST Arabidopsis thaliana protein match is: DERLIN-2.1 (TAIR:AT4G21810.1); Has 863 Blast hits to 862 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 343; Fungi - 190; Plants - 145; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (q4g2j3|der22_maize : 384.0) Derlin-2.2 (ZmDerlin2-2) - Zea mays (Maize) & (gnl|cdd|36076 : 250.0) no description available & (gnl|cdd|86674 : 169.0) no description available & (reliability: 784.0) & (original description: Putative derl2, Description = Derlin, PFAM = PF04511)' T '29.5' 'protein.degradation' 'niben101scf03239_86583-89490' '(at3g61540 : 214.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: peptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S33, prolyl aminopeptidase (InterPro:IPR002410), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); Has 1602 Blast hits to 1599 proteins in 535 species: Archae - 0; Bacteria - 1162; Metazoa - 5; Fungi - 126; Plants - 75; Viruses - 0; Other Eukaryotes - 234 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative pap, Description = Proline iminopeptidase, PFAM = )' T '29.5' 'protein.degradation' 'niben101scf03280_231574-238441' '(at4g20070 : 671.0) The gene encoding Arabidopsis thaliana Allantoate Amidohydrolase (AtAAH)which catalyzes the allantoate deiminase reaction (EC 3.5.3.9)is expressed in all parts of the plant being consistent with a function in purine turnover in Arabidopsis.; allantoate amidohydrolase (AAH); CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), ArgE/DapE/ACY1/CPG2/YscS, conserved site (InterPro:IPR001261), Amidase, hydantoinase/carbamoylase (InterPro:IPR010158), Peptidase M20, dimerisation (InterPro:IPR011650); BEST Arabidopsis thaliana protein match is: ureidoglycolate amidohydrolase (TAIR:AT5G43600.1); Has 3541 Blast hits to 3529 proteins in 962 species: Archae - 54; Bacteria - 2502; Metazoa - 32; Fungi - 158; Plants - 88; Viruses - 0; Other Eukaryotes - 707 (source: NCBI BLink). & (gnl|cdd|82918 : 381.0) no description available & (reliability: 1342.0) & (original description: Putative aah, Description = Allantoate amidohydrolase, PFAM = PF01546;PF07687)' T '29.5' 'protein.degradation' 'niben101scf03307_142817-149091' '(at4g29330 : 344.0) DERLIN-1 (DER1); CONTAINS InterPro DOMAIN/s: Der1-like (InterPro:IPR007599); BEST Arabidopsis thaliana protein match is: DERLIN-2.2 (TAIR:AT4G04860.1); Has 918 Blast hits to 916 proteins in 241 species: Archae - 0; Bacteria - 22; Metazoa - 340; Fungi - 200; Plants - 147; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink). & (q06397|derl1_orysa : 312.0) Derlin-1 (DER1-like protein 1) (OsDerlin 1-1) (18 kDa cold-induced protein) - Oryza sativa (Rice) & (gnl|cdd|36076 : 212.0) no description available & (gnl|cdd|86674 : 139.0) no description available & (reliability: 688.0) & (original description: Putative DER1, Description = Derlin-1, PFAM = PF04511)' T '29.5' 'protein.degradation' 'niben101scf03357_101660-127242' '(at2g14260 : 565.0) encodes proline iminopeptidase; proline iminopeptidase (PIP); FUNCTIONS IN: aminopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S33, proline iminopeptidase 1 (InterPro:IPR005944), Peptidase S33, prolyl aminopeptidase (InterPro:IPR002410), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84863 : 88.7) no description available & (reliability: 1130.0) & (original description: Putative PIP, Description = Proline iminopeptidase, PFAM = PF00561)' T '29.5' 'protein.degradation' 'niben101scf03396_460940-474382' '(at3g13510 : 686.0) Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G55360.1); Has 759 Blast hits to 705 proteins in 28 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 10; Plants - 734; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66735 : 272.0) no description available & (reliability: 1350.0) & (original description: Putative BnaA08g00520D, Description = BnaA08g00520D protein, PFAM = PF14365;PF03080)' T '29.5' 'protein.degradation' 'niben101scf03445_378674-383095' '(at4g10790 : 240.0) UBX domain-containing protein; CONTAINS InterPro DOMAIN/s: UAS (InterPro:IPR006577), UBX (InterPro:IPR001012); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G23040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36577 : 131.0) no description available & (gnl|cdd|47890 : 108.0) no description available & (reliability: 480.0) & (original description: Putative PUX10, Description = BnaA03g24700D protein, PFAM = PF00789)' T '29.5' 'protein.degradation' 'niben101scf03445_445785-456372' '(at5g50150 : 617.0) Protein of Unknown Function (DUF239); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G23340.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66735 : 264.0) no description available & (reliability: 1180.0) & (original description: Putative NIP1, Description = NEP-interacting protein 1, PFAM = PF03080;PF14365)' T '29.5' 'protein.degradation' 'niben101scf03455_211341-214559' '(at1g53530 : 183.0) Peptidase S24/S26A/S26B/S26C family protein; FUNCTIONS IN: serine-type peptidase activity, peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (InterPro:IPR011056), Peptidase S24/S26A/S26B, conserved region (InterPro:IPR019759), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927), Peptidase S26A, signal peptidase I, conserved site (InterPro:IPR019758), Peptidase S26, conserved region (InterPro:IPR019533), Peptidase S26A, signal peptidase I (InterPro:IPR000223); BEST Arabidopsis thaliana protein match is: Peptidase S24/S26A/S26B/S26C family protein (TAIR:AT1G29960.1); Has 3355 Blast hits to 3350 proteins in 1043 species: Archae - 0; Bacteria - 2238; Metazoa - 246; Fungi - 222; Plants - 262; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink). & (gnl|cdd|35392 : 155.0) no description available & (reliability: 330.0) & (original description: Putative 3212, Description = Mitochondrial inner membrane protease subunit 1, PFAM = PF00717)' T '29.5' 'protein.degradation' 'niben101scf03481_145298-157655' '(at2g36670 : 551.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G22850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36553 : 222.0) no description available & (gnl|cdd|84452 : 113.0) no description available & (q6yny7|asp1_orysa : 98.2) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 1090.0) & (original description: Putative AP13, Description = Aspartic protease 13, PFAM = PF14543;PF14541)' T '29.5' 'protein.degradation' 'niben101scf03710_110459-121516' '(at4g17510 : 352.0) ubiquitin C-terminal hydrolase 3 (UCH3); FUNCTIONS IN: ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (InterPro:IPR001578); BEST Arabidopsis thaliana protein match is: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (TAIR:AT1G65650.1); Has 1294 Blast hits to 1288 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 624; Fungi - 359; Plants - 155; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (gnl|cdd|36629 : 285.0) no description available & (gnl|cdd|85235 : 225.0) no description available & (reliability: 704.0) & (original description: Putative UCH3, Description = Ubiquitin carboxyl-terminal hydrolase 3, PFAM = PF01088)' T '29.5' 'protein.degradation' 'niben101scf03710_1139709-1150209' '(at1g77480 : 410.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G44130.1); Has 1743 Blast hits to 1735 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 23; Plants - 1626; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (q6yny7|asp1_orysa : 276.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (gnl|cdd|36553 : 195.0) no description available & (reliability: 816.0) & (original description: Putative ASP1, Description = Aspartic proteinase Asp1, PFAM = PF14541;PF14543)' T '29.5' 'protein.degradation' 'niben101scf03790_5806-12973' '(at4g30920 : 790.0) Cytosol aminopeptidase family protein; FUNCTIONS IN: manganese ion binding, metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, protein metabolic process; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Peptidase M17, leucyl aminopeptidase, C-terminal (InterPro:IPR000819), Peptidase M17, leucyl aminopeptidase, N-terminal (InterPro:IPR008283), Peptidase M17, leucyl aminopeptidase (InterPro:IPR011356); BEST Arabidopsis thaliana protein match is: Cytosol aminopeptidase family protein (TAIR:AT4G30910.1); Has 9817 Blast hits to 9813 proteins in 2024 species: Archae - 18; Bacteria - 5432; Metazoa - 663; Fungi - 36; Plants - 122; Viruses - 1; Other Eukaryotes - 3545 (source: NCBI BLink). & (p31427|ampl_soltu : 779.0) Leucine aminopeptidase, chloroplast precursor (EC 3.4.11.1) (LAP) (Leucyl aminopeptidase) (Proline aminopeptidase) (EC 3.4.11.5) (Prolyl aminopeptidase) - Solanum tuberosum (Potato) & (gnl|cdd|48344 : 494.0) no description available & (gnl|cdd|37808 : 475.0) no description available & (reliability: 1580.0) & (original description: Putative lap2, Description = Leucine aminopeptidase, PFAM = PF02789;PF00883)' T '29.5' 'protein.degradation' 'niben101scf03820_214633-224131' '(at5g42620 : 1328.0) metalloendopeptidases;zinc ion binding; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis, cell adhesion; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EGF, extracellular (InterPro:IPR013111), EGF-like, type 3 (InterPro:IPR000742), EGF-like region, conserved site (InterPro:IPR013032), Peptidase M8, leishmanolysin (InterPro:IPR001577). & (gnl|cdd|37767 : 561.0) no description available & (gnl|cdd|65268 : 247.0) no description available & (reliability: 2656.0) & (original description: Putative BnaA06g37090D, Description = BnaA06g37090D protein, PFAM = PF07974;PF01457)' T '29.5' 'protein.degradation' 'niben101scf03842_100434-103250' '(at4g36800 : 241.0) RUB1 conjugating enzyme that conjugates CUL1 and is involved in auxin response and embryogenesis. RCE1 protein physically interacts with RBX1, which may be the E3 for CUL1.; RUB1 conjugating enzyme 1 (RCE1); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), RUB1 conjugating enzyme Ubc12 (InterPro:IPR015580); BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein (TAIR:AT2G18600.1); Has 8473 Blast hits to 8470 proteins in 386 species: Archae - 0; Bacteria - 0; Metazoa - 3871; Fungi - 1731; Plants - 1533; Viruses - 20; Other Eukaryotes - 1318 (source: NCBI BLink). & (gnl|cdd|35641 : 234.0) no description available & (gnl|cdd|84587 : 134.0) no description available & (reliability: 478.0) & (original description: Putative RCE1, Description = NEDD8-conjugating enzyme Ubc12, PFAM = PF00179)' T '29.5' 'protein.degradation' 'niben101scf03963_79789-86781' '(at5g22850 : 649.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G08210.1); Has 4888 Blast hits to 4872 proteins in 390 species: Archae - 0; Bacteria - 0; Metazoa - 1696; Fungi - 940; Plants - 1998; Viruses - 1; Other Eukaryotes - 253 (source: NCBI BLink). & (gnl|cdd|36553 : 235.0) no description available & (gnl|cdd|84452 : 119.0) no description available & (q6yny7|asp1_orysa : 115.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 1298.0) & (original description: Putative AP13, Description = Aspartic protease 13, PFAM = PF14543;PF14541)' T '29.5' 'protein.degradation' 'niben101scf03963_294999-305566' '(at2g27920 : 602.0) serine carboxypeptidase-like 51 (SCPL51); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 48 (TAIR:AT3G45010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36497 : 482.0) no description available & (gnl|cdd|84781 : 243.0) no description available & (p52712|cbpx_orysa : 111.0) Serine carboxypeptidase-like precursor (EC 3.4.16.-) - Oryza sativa (Rice) & (reliability: 1204.0) & (original description: Putative SCPL51, Description = Serine carboxypeptidase-like 51, PFAM = PF00450)' T '29.5' 'protein.degradation' 'niben101scf04018_666162-671425' '(at2g06510 : 830.0) Encodes a homolog of Replication Protein A that is involved in meiosis I in pollen mother cells. rpa1a mutants have a reduced number of class I crossovers. The protein is located in chromatin-associated foci in early leptotene and can be detected in these foci until late pachytene of meiosis I.; replication protein A 1A (RPA1A); FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: nuclear chromatin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Replication factor-a protein 1 Rpa1 (InterPro:IPR004591), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication factor A, C-terminal (InterPro:IPR013955), Replication factor-A protein 1, N-terminal (InterPro:IPR007199); BEST Arabidopsis thaliana protein match is: Replication factor-A protein 1-related (TAIR:AT4G19130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72071 : 200.0) no description available & (reliability: 1660.0) & (original description: Putative RPA1A, Description = Replication protein A 70 kDa DNA-binding subunit A, PFAM = PF01336;PF08646;PF16900;PF04057)' T '29.5' 'protein.degradation' 'niben101scf04040_647794-659489' '(at4g33090 : 1352.0) encodes an aminopeptidase, a ortholog of mouse microsomal AP (EC 3.4.11.2).; aminopeptidase M1 (APM1); FUNCTIONS IN: aminopeptidase activity; INVOLVED IN: auxin polar transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, puromycin-sensitive aminopeptidase (InterPro:IPR015568), Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782); BEST Arabidopsis thaliana protein match is: Peptidase M1 family protein (TAIR:AT1G63770.3); Has 9205 Blast hits to 9101 proteins in 1870 species: Archae - 122; Bacteria - 4443; Metazoa - 2260; Fungi - 495; Plants - 237; Viruses - 0; Other Eukaryotes - 1648 (source: NCBI BLink). & (gnl|cdd|36264 : 767.0) no description available & (gnl|cdd|30656 : 441.0) no description available & (reliability: 2704.0) & (original description: Putative APM1, Description = Aminopeptidase M1, PFAM = PF11838;PF01433)' T '29.5' 'protein.degradation' 'niben101scf04044_34374-42061' '(at5g05740 : 570.0) S2P-like putative metalloprotease, also contain transmembrane helices near their C-termini and many of them, five of seven, contain a conserved zinc-binding motif HEXXH. Homolog of EGY1. Each of the EGY1 and EGY-like proteins share two additional highly conserved motifs, the previously reported NPDG motif (aa 442ñ454 in EGY1, Rudner et al., 1999) and a newly defined GNLR motif (aa 171ñ179 in EGY1). The GNLR motif is a novel signature motif unique to EGY1 and EGY-like proteins as well as other EGY1 orthologs found in cyanobacteria.; ethylene-dependent gravitropism-deficient and yellow-green-like 2 (EGY2); FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M50 (InterPro:IPR008915); BEST Arabidopsis thaliana protein match is: Peptidase M50 family protein (TAIR:AT5G35220.1). & (reliability: 1140.0) & (original description: Putative EGY2, Description = Probable zinc metalloprotease EGY2, chloroplastic, PFAM = )' T '29.5' 'protein.degradation' 'niben101scf04240_21317-33322' '(at4g36760 : 983.0) Arabidopsis aminopeptidase P1; aminopeptidase P1 (APP1); FUNCTIONS IN: aminopeptidase activity, N-1-naphthylphthalamic acid binding; INVOLVED IN: auxin polar transport; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site (InterPro:IPR001131), Peptidase M24, structural domain (InterPro:IPR000994), Creatinase (InterPro:IPR000587); BEST Arabidopsis thaliana protein match is: Metallopeptidase M24 family protein (TAIR:AT3G05350.1); Has 10398 Blast hits to 10335 proteins in 2401 species: Archae - 277; Bacteria - 6310; Metazoa - 362; Fungi - 246; Plants - 146; Viruses - 0; Other Eukaryotes - 3057 (source: NCBI BLink). & (gnl|cdd|37624 : 761.0) no description available & (gnl|cdd|29970 : 350.0) no description available & (reliability: 1966.0) & (original description: Putative app2, Description = Xaa-Pro aminopeptidase 2, PFAM = PF00557;PF01321;PF16189;PF16188)' T '29.5' 'protein.degradation' 'niben101scf04431_429620-437823' '(at2g03120 : 506.0) homologous to Signal Peptide Peptidases (SPP), required for pollen development and pollen germination. No homozygotes could be recovered from a T-DNA insertion mutant.; signal peptide peptidase (SPP); FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: pollen germination, pollen development; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22B, signal peptide peptidase (InterPro:IPR007369); BEST Arabidopsis thaliana protein match is: SIGNAL PEPTIDE PEPTIDASE-LIKE 1 (TAIR:AT4G33410.1); Has 989 Blast hits to 959 proteins in 196 species: Archae - 4; Bacteria - 0; Metazoa - 468; Fungi - 136; Plants - 243; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|37654 : 333.0) no description available & (gnl|cdd|67855 : 250.0) no description available & (reliability: 1012.0) & (original description: Putative SPP, Description = Signal peptide peptidase, PFAM = PF04258)' T '29.5' 'protein.degradation' 'niben101scf04457_451359-454985' '(gnl|cdd|36553 : 103.0) no description available & (at2g03200 : 96.7) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G01300.1); Has 2634 Blast hits to 2609 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 441; Plants - 1862; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 185.6) & (original description: Putative PGSC0003DMG400043757, Description = , PFAM = PF14543;PF14541)' T '29.5' 'protein.degradation' 'niben101scf04625_27055-33496' '(at1g70550 : 540.0) Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G23340.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66735 : 195.0) no description available & (reliability: 1080.0) & (original description: Putative NIP1, Description = Carboxyl-terminal peptidase, PFAM = PF03080;PF03080;PF14365)' T '29.5' 'protein.degradation' 'niben101scf04926_370536-387579' '(at1g02170 : 500.0) Metacaspase AtMCP1b. Arginine/lysine-specific cysteine protease activity. Induces apoptosis in yeast. Contains Pfam profile PF00656: ICE-like protease (caspase) p20 domain; metacaspase 1 (AMC1); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis, induction of apoptosis; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735), Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 2 (TAIR:AT4G25110.1); Has 1179 Blast hits to 1148 proteins in 266 species: Archae - 3; Bacteria - 262; Metazoa - 3; Fungi - 268; Plants - 419; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|36759 : 407.0) no description available & (gnl|cdd|84933 : 143.0) no description available & (reliability: 1000.0) & (original description: Putative Os03g0389100, Description = ICE-like protease p20 domain containing protein, expressed, PFAM = PF00656;PF06943)' T '29.5' 'protein.degradation' 'niben101scf04941_278072-302466' '(at4g14570 : 875.0) acylaminoacyl-peptidase-related; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G36210.1); Has 9037 Blast hits to 9017 proteins in 1444 species: Archae - 238; Bacteria - 5246; Metazoa - 1023; Fungi - 365; Plants - 298; Viruses - 0; Other Eukaryotes - 1867 (source: NCBI BLink). & (gnl|cdd|31695 : 174.0) no description available & (gnl|cdd|37311 : 160.0) no description available & (reliability: 1750.0) & (original description: Putative AARE, Description = Acylamino-acid-releasing enzyme, PFAM = PF00326)' T '29.5' 'protein.degradation' 'niben101scf04988_289002-320402' '(at1g63770 : 1526.0) Peptidase M1 family protein; FUNCTIONS IN: metallopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782), Peptidase M1, alanyl aminopeptidase (InterPro:IPR012779); BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1). & (gnl|cdd|30656 : 595.0) no description available & (gnl|cdd|36264 : 397.0) no description available & (reliability: 3052.0) & (original description: Putative pepN, Description = Aminopeptidase N, PFAM = PF11940;PF17432;PF01433)' T '29.5' 'protein.degradation' 'niben101scf05216_595525-600524' '(at1g55360 : 687.0) Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT3G13510.1); Has 753 Blast hits to 700 proteins in 28 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 10; Plants - 728; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66735 : 277.0) no description available & (reliability: 1362.0) & (original description: Putative BnaC04g03440D, Description = BnaC04g03440D protein, PFAM = PF03080;PF14365)' T '29.5' 'protein.degradation' 'niben101scf05343_199731-206538' '(at1g67420 : 300.0) Zn-dependent exopeptidases superfamily protein; FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M28 (InterPro:IPR007484); BEST Arabidopsis thaliana protein match is: Zn-dependent exopeptidases superfamily protein (TAIR:AT5G20660.1). & (gnl|cdd|37405 : 116.0) no description available & (reliability: 600.0) & (original description: Putative At1g67420, Description = Os07g0295800 protein, PFAM = PF04389)' T '29.5' 'protein.degradation' 'niben101scf05385_165256-173682' '(at1g76140 : 1111.0) Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106), Peptidase S9A, prolyl oligopeptidase (InterPro:IPR002470); BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT1G20380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37448 : 833.0) no description available & (gnl|cdd|31694 : 448.0) no description available & (reliability: 2222.0) & (original description: Putative 33693, Description = Predicted protein, PFAM = PF00326;PF02897)' T '29.5' 'protein.degradation' 'niben101scf05444_663198-736975' '(at5g20660 : 1065.0) Zn-dependent exopeptidases superfamily protein; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 36 Blast hits to 36 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|37405 : 489.0) no description available & (gnl|cdd|86644 : 138.0) no description available & (reliability: 2130.0) & (original description: Putative vp24, Description = 24 kDa vacuolar protein VP24, PFAM = PF04389)' T '29.5' 'protein.degradation' 'niben101scf05674_455994-464084' '(at5g66960 : 1078.0) Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106), Peptidase S9A, prolyl oligopeptidase (InterPro:IPR002470); BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT1G69020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37448 : 668.0) no description available & (gnl|cdd|31956 : 410.0) no description available & (reliability: 2156.0) & (original description: Putative At5g66960, Description = Prolyl oligopeptidase family protein, PFAM = PF00326;PF02897)' T '29.5' 'protein.degradation' 'niben101scf05880_151751-161483' '(at3g51800 : 553.0) putative nuclear DNA-binding protein G2p (AtG2) mRNA,; ATG2; FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, cellular process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24, structural domain (InterPro:IPR000994), Proliferation-associated protein 1 (InterPro:IPR004545), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 2A (TAIR:AT2G44180.1). & (gnl|cdd|37987 : 445.0) no description available & (gnl|cdd|73244 : 235.0) no description available & (reliability: 1106.0) & (original description: Putative EBP1, Description = ERBB-3 BINDING PROTEIN 1, PFAM = PF00557)' T '29.5' 'protein.degradation' 'niben101scf05912_288207-305839' '(at5g42390 : 1778.0) Insulinase (Peptidase family M16) family protein; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding; INVOLVED IN: proteolysis; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) protein (TAIR:AT5G56730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36177 : 378.0) no description available & (gnl|cdd|30957 : 142.0) no description available & (reliability: 3556.0) & (original description: Putative SPP, Description = Stromal processing peptidase, chloroplastic, PFAM = PF00675;PF05193;PF05193)' T '29.5' 'protein.degradation' 'niben101scf06013_23954-57531' '(at1g06900 : 1372.0) Insulinase (Peptidase family M16) family protein; FUNCTIONS IN: metalloendopeptidase activity, catalytic activity, zinc ion binding, metal ion binding; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) family protein (TAIR:AT2G41790.1); Has 36039 Blast hits to 19499 proteins in 2240 species: Archae - 83; Bacteria - 7236; Metazoa - 10750; Fungi - 4343; Plants - 1987; Viruses - 664; Other Eukaryotes - 10976 (source: NCBI BLink). & (gnl|cdd|36177 : 803.0) no description available & (gnl|cdd|31228 : 564.0) no description available & (reliability: 2744.0) & (original description: Putative At1g06900, Description = Nardilysin-like, PFAM = PF00675;PF05193;PF05193;PF16187)' T '29.5' 'protein.degradation' 'niben101scf06078_473380-481618' '(at4g17510 : 351.0) ubiquitin C-terminal hydrolase 3 (UCH3); FUNCTIONS IN: ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (InterPro:IPR001578); BEST Arabidopsis thaliana protein match is: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (TAIR:AT1G65650.1); Has 1294 Blast hits to 1288 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 624; Fungi - 359; Plants - 155; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (gnl|cdd|36629 : 290.0) no description available & (gnl|cdd|85235 : 229.0) no description available & (reliability: 702.0) & (original description: Putative UCH3, Description = Ubiquitin carboxyl-terminal hydrolase 3, PFAM = PF01088)' T '29.5' 'protein.degradation' 'niben101scf06252_117527-123486' '(at5g22860 : 543.0) Serine carboxypeptidase S28 family protein; FUNCTIONS IN: serine-type peptidase activity, peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S28 (InterPro:IPR008758); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G24280.1); Has 1206 Blast hits to 1180 proteins in 169 species: Archae - 0; Bacteria - 11; Metazoa - 595; Fungi - 183; Plants - 236; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|37394 : 506.0) no description available & (gnl|cdd|86891 : 252.0) no description available & (reliability: 1086.0) & (original description: Putative smyd2, Description = Lysosomal Pro-X carboxypeptidase, PFAM = PF05577)' T '29.5' 'protein.degradation' 'niben101scf06252_258108-263979' '(at5g22860 : 556.0) Serine carboxypeptidase S28 family protein; FUNCTIONS IN: serine-type peptidase activity, peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S28 (InterPro:IPR008758); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G24280.1); Has 1206 Blast hits to 1180 proteins in 169 species: Archae - 0; Bacteria - 11; Metazoa - 595; Fungi - 183; Plants - 236; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|37394 : 503.0) no description available & (gnl|cdd|86891 : 242.0) no description available & (reliability: 1112.0) & (original description: Putative v1g120931, Description = Predicted protein, PFAM = PF05577)' T '29.5' 'protein.degradation' 'niben101scf06290_87873-104743' '(at2g25740 : 572.0) ATP-dependent protease La (LON) domain protein; FUNCTIONS IN: ATP-dependent peptidase activity; INVOLVED IN: proteolysis, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, lon N-terminal (InterPro:IPR003111); Has 2345 Blast hits to 2258 proteins in 710 species: Archae - 0; Bacteria - 1319; Metazoa - 281; Fungi - 6; Plants - 99; Viruses - 0; Other Eukaryotes - 640 (source: NCBI BLink). & (gnl|cdd|36614 : 199.0) no description available & (reliability: 1144.0) & (original description: Putative At2g25740, Description = ATP-dependent protease La (LON) domain protein, PFAM = PF03226;PF02190)' T '29.5' 'protein.degradation' 'niben101scf06342_293686-298885' '(p37891|cbp3_orysa : 706.0) Serine carboxypeptidase 3 precursor (EC 3.4.16.5) (Serine carboxypeptidase III) - Oryza sativa (Rice) & (at3g45010 : 703.0) serine carboxypeptidase-like 48 (scpl48); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 47 (TAIR:AT5G22980.1); Has 3550 Blast hits to 3457 proteins in 337 species: Archae - 0; Bacteria - 135; Metazoa - 672; Fungi - 884; Plants - 1462; Viruses - 0; Other Eukaryotes - 397 (source: NCBI BLink). & (gnl|cdd|84781 : 429.0) no description available & (gnl|cdd|36496 : 382.0) no description available & (reliability: 1406.0) & (original description: Putative SCPL48, Description = Serine carboxypeptidase-like 48, PFAM = PF00450)' T '29.5' 'protein.degradation' 'niben101scf06509_1-7304' '(at5g19740 : 887.0) Peptidase M28 family protein; FUNCTIONS IN: dipeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Transferrin receptor-like, dimerisation (InterPro:IPR007365), Peptidase M28 (InterPro:IPR007484); BEST Arabidopsis thaliana protein match is: Peptidase M28 family protein (TAIR:AT3G54720.1); Has 3567 Blast hits to 3525 proteins in 555 species: Archae - 24; Bacteria - 1302; Metazoa - 657; Fungi - 527; Plants - 315; Viruses - 0; Other Eukaryotes - 742 (source: NCBI BLink). & (gnl|cdd|37406 : 548.0) no description available & (gnl|cdd|80343 : 210.0) no description available & (reliability: 1774.0) & (original description: Putative AMP1, Description = Probable glutamate carboxypeptidase 2, PFAM = PF04389;PF04253;PF02225)' T '29.5' 'protein.degradation' 'niben101scf06902_183575-190010' '(at1g02170 : 514.0) Metacaspase AtMCP1b. Arginine/lysine-specific cysteine protease activity. Induces apoptosis in yeast. Contains Pfam profile PF00656: ICE-like protease (caspase) p20 domain; metacaspase 1 (AMC1); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis, induction of apoptosis; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735), Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 2 (TAIR:AT4G25110.1); Has 1179 Blast hits to 1148 proteins in 266 species: Archae - 3; Bacteria - 262; Metazoa - 3; Fungi - 268; Plants - 419; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|36759 : 429.0) no description available & (gnl|cdd|84933 : 152.0) no description available & (reliability: 1028.0) & (original description: Putative AMC1, Description = Metacaspase-1, PFAM = PF06943;PF00656)' T '29.5' 'protein.degradation' 'niben101scf07066_209046-216900' '(q9sxu1|psa7_cicar : 414.0) Proteasome subunit alpha type 7 (EC 3.4.25.1) (20S proteasome alpha subunit D) (20S proteasome subunit alpha-4) - Cicer arietinum (Chickpea) (Garbanzo) & (at5g66140 : 402.0) Encodes alpha5 subunit of 20S proteosome complex involved in protein degradation.; proteasome alpha subunit D2 (PAD2); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, proteasome core complex, alpha-subunit complex, chloroplast, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit PAD1 (TAIR:AT3G51260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35404 : 373.0) no description available & (gnl|cdd|48453 : 366.0) no description available & (reliability: 802.0) & (original description: Putative PAD1, Description = Proteasome subunit alpha type-7, PFAM = PF10584;PF00227)' T '29.5' 'protein.degradation' 'niben101scf07109_2873-16060' '(q9sxu1|psa7_cicar : 411.0) Proteasome subunit alpha type 7 (EC 3.4.25.1) (20S proteasome alpha subunit D) (20S proteasome subunit alpha-4) - Cicer arietinum (Chickpea) (Garbanzo) & (at3g51260 : 402.0) 20S proteosomal alpha subunits. Interacts with SnRK, SKP1/ASK1 during proteasomal binding of an SCF ubiquitin ligase.; 20S proteasome alpha subunit PAD1 (PAD1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: proteasome alpha subunit D2 (TAIR:AT5G66140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35404 : 374.0) no description available & (gnl|cdd|48453 : 365.0) no description available & (reliability: 804.0) & (original description: Putative PAD1, Description = Proteasome subunit alpha type-7, PFAM = PF10584;PF00227)' T '29.5' 'protein.degradation' 'niben101scf07199_90185-96667' '(at3g45010 : 654.0) serine carboxypeptidase-like 48 (scpl48); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 47 (TAIR:AT5G22980.1); Has 3550 Blast hits to 3457 proteins in 337 species: Archae - 0; Bacteria - 135; Metazoa - 672; Fungi - 884; Plants - 1462; Viruses - 0; Other Eukaryotes - 397 (source: NCBI BLink). & (p37891|cbp3_orysa : 649.0) Serine carboxypeptidase 3 precursor (EC 3.4.16.5) (Serine carboxypeptidase III) - Oryza sativa (Rice) & (gnl|cdd|84781 : 423.0) no description available & (gnl|cdd|36496 : 372.0) no description available & (reliability: 1308.0) & (original description: Putative cpyA, Description = Carboxypeptidase, PFAM = PF00450)' T '29.5' 'protein.degradation' 'niben101scf07391_89401-99850' '(at4g23040 : 327.0) Ubiquitin-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G11740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36577 : 167.0) no description available & (reliability: 654.0) & (original description: Putative PUX13, Description = Plant UBX domain-containing protein 13, PFAM = PF00789;PF14555)' T '29.5' 'protein.degradation' 'niben101scf07438_231536-241528' '(at5g35220 : 614.0) Membrane-associated and ATP-independent metalloprotease; EGY1 protein contains eight trans-membrane domains at its C-terminus, and carries out beta-casein degradation in an ATP-independent manner. EGY1 is required for development of both thylakoid grana and a well-organized lamellae system in chloroplast. Additionally, EGY1 is required for the accumulation of chlorophyll and chlorophyll a/b binding (CAB) proteins (both PS I and PS II) in chloroplast membranes, and for grana formation and normal chloroplast development. Loss of EGY1 function also has an effect on endodermal plastid biogenesis.; ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN 1 (EGY1); FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: in 9 processes; LOCATED IN: chloroplast, membrane; EXPRESSED IN: hypocotyl endodermis, flower, peduncle, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Peptidase M50 (InterPro:IPR008915); BEST Arabidopsis thaliana protein match is: metalloendopeptidases;zinc ion binding;DNA binding (TAIR:AT5G35210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1228.0) & (original description: Putative EGY1, Description = Probable zinc metalloprotease EGY1, chloroplastic, PFAM = )' T '29.5' 'protein.degradation' 'niben101scf07497_103751-110198' '(at2g22970 : 479.0) serine carboxypeptidase-like 11 (SCPL11); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 12 (TAIR:AT2G22920.2); Has 3900 Blast hits to 3815 proteins in 421 species: Archae - 0; Bacteria - 404; Metazoa - 629; Fungi - 816; Plants - 1557; Viruses - 0; Other Eukaryotes - 494 (source: NCBI BLink). & (gnl|cdd|36496 : 453.0) no description available & (gnl|cdd|84781 : 423.0) no description available & (p07519|cbp1_horvu : 342.0) Serine carboxypeptidase 1 precursor (EC 3.4.16.5) (Serine carboxypeptidase I) (Carboxypeptidase C) (CP-MI) [Contains: Serine carboxypeptidase 1 chain A (Serine carboxypeptidase I chain A); Serine carboxypeptidase 1 chain B (Serine carbo & (reliability: 930.0) & (original description: Putative SCPL11, Description = Serine carboxypeptidase-like 11, PFAM = PF00450)' T '29.5' 'protein.degradation' 'niben101scf07564_148060-162123' '(at3g27110 : 479.0) Peptidase family M48 family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M48 (InterPro:IPR001915); Has 2654 Blast hits to 2654 proteins in 909 species: Archae - 247; Bacteria - 2042; Metazoa - 0; Fungi - 12; Plants - 34; Viruses - 0; Other Eukaryotes - 319 (source: NCBI BLink). & (gnl|cdd|30847 : 89.6) no description available & (reliability: 958.0) & (original description: Putative tll0639, Description = Tll0639 protein, PFAM = PF01435)' T '29.5' 'protein.degradation' 'niben101scf07576_414792-437693' '(at4g01320 : 688.0) CAAX protease with broad substrate specificity. Localized exclusively to the endoplasmic reticulum.; ATSTE24; FUNCTIONS IN: endopeptidase activity, metalloendopeptidase activity; INVOLVED IN: CAAX-box protein maturation, proteolysis; LOCATED IN: endoplasmic reticulum, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M48 (InterPro:IPR001915); Has 2991 Blast hits to 2984 proteins in 996 species: Archae - 162; Bacteria - 1572; Metazoa - 206; Fungi - 172; Plants - 49; Viruses - 0; Other Eukaryotes - 830 (source: NCBI BLink). & (gnl|cdd|37930 : 439.0) no description available & (gnl|cdd|85452 : 118.0) no description available & (reliability: 1376.0) & (original description: Putative FACE1, Description = CAAX prenyl protease 1 homolog, PFAM = PF16491;PF01435)' T '29.5' 'protein.degradation' 'niben101scf07585_106740-111004' '(at1g02170 : 253.0) Metacaspase AtMCP1b. Arginine/lysine-specific cysteine protease activity. Induces apoptosis in yeast. Contains Pfam profile PF00656: ICE-like protease (caspase) p20 domain; metacaspase 1 (AMC1); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis, induction of apoptosis; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735), Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 2 (TAIR:AT4G25110.1); Has 1179 Blast hits to 1148 proteins in 266 species: Archae - 3; Bacteria - 262; Metazoa - 3; Fungi - 268; Plants - 419; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|36759 : 244.0) no description available & (gnl|cdd|84933 : 115.0) no description available & (reliability: 506.0) & (original description: Putative AMC1, Description = Metacaspase-1, PFAM = PF00656)' T '29.5' 'protein.degradation' 'niben101scf07585_118529-122525' '(at1g02170 : 297.0) Metacaspase AtMCP1b. Arginine/lysine-specific cysteine protease activity. Induces apoptosis in yeast. Contains Pfam profile PF00656: ICE-like protease (caspase) p20 domain; metacaspase 1 (AMC1); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis, induction of apoptosis; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735), Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 2 (TAIR:AT4G25110.1); Has 1179 Blast hits to 1148 proteins in 266 species: Archae - 3; Bacteria - 262; Metazoa - 3; Fungi - 268; Plants - 419; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|36759 : 289.0) no description available & (gnl|cdd|84933 : 125.0) no description available & (reliability: 594.0) & (original description: Putative AMC1, Description = Metacaspase-1, PFAM = PF00656)' T '29.5' 'protein.degradation' 'niben101scf07712_225623-229937' '(at5g49980 : 869.0) auxin F-box protein 5 (AFB5); CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT4G24390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37158 : 165.0) no description available & (reliability: 1738.0) & (original description: Putative At5g49980, Description = Transport inhibitor response 1-like protein, PFAM = )' T '29.5' 'protein.degradation' 'niben101scf07790_345442-351543' '(at4g04860 : 395.0) DERLIN-2.2 (DER2.2); CONTAINS InterPro DOMAIN/s: Der1-like (InterPro:IPR007599); BEST Arabidopsis thaliana protein match is: DERLIN-2.1 (TAIR:AT4G21810.1); Has 863 Blast hits to 862 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 343; Fungi - 190; Plants - 145; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (q851x7|derl2_orysa : 385.0) Derlin-2 (OsDerlin 2-1) - Oryza sativa (Rice) & (gnl|cdd|36076 : 254.0) no description available & (gnl|cdd|86674 : 169.0) no description available & (reliability: 790.0) & (original description: Putative derl2, Description = Derlin, PFAM = PF04511)' T '29.5' 'protein.degradation' 'niben101scf07850_361386-370398' '(gnl|cdd|37394 : 563.0) no description available & (at2g24280 : 555.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: serine-type peptidase activity, serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system, lysosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S28 (InterPro:IPR008758); BEST Arabidopsis thaliana protein match is: Serine carboxypeptidase S28 family protein (TAIR:AT5G65760.1); Has 1253 Blast hits to 1217 proteins in 170 species: Archae - 0; Bacteria - 7; Metazoa - 611; Fungi - 189; Plants - 249; Viruses - 0; Other Eukaryotes - 197 (source: NCBI BLink). & (gnl|cdd|86891 : 259.0) no description available & (reliability: 1110.0) & (original description: Putative PRCP, Description = Lysosomal Pro-X carboxypeptidase, PFAM = PF05577)' T '29.5' 'protein.degradation' 'niben101scf08142_76947-94434' '(at1g73170 : 668.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATP-dependent peptidase activity, nucleotide binding, serine-type endopeptidase activity, ATP binding; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10420.2); Has 1135 Blast hits to 1119 proteins in 483 species: Archae - 15; Bacteria - 797; Metazoa - 45; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (gnl|cdd|33644 : 258.0) no description available & (reliability: 1336.0) & (original description: Putative ycf45, Description = Uncharacterized protein ycf45, PFAM = PF00004)' T '29.5' 'protein.degradation' 'niben101scf08422_200371-211724' '(at1g28320 : 647.0) Mutants in this gene are defective in the processing of pre-glyoxysomal malate dehydrogenase (pre-gMDH) to gMDH.; DEG15; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003); BEST Arabidopsis thaliana protein match is: DegP protease 1 (TAIR:AT3G27925.1); Has 3917 Blast hits to 3716 proteins in 1340 species: Archae - 34; Bacteria - 3021; Metazoa - 72; Fungi - 16; Plants - 139; Viruses - 0; Other Eukaryotes - 635 (source: NCBI BLink). & (reliability: 1294.0) & (original description: Putative DEG15, Description = Glyoxysomal processing protease, glyoxysomal, PFAM = PF13365)' T '29.5' 'protein.degradation' 'niben101scf08531_379622-388001' '(at1g35340 : 247.0) ATP-dependent protease La (LON) domain protein; FUNCTIONS IN: ATP-dependent peptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, lon N-terminal (InterPro:IPR003111). & (reliability: 494.0) & (original description: Putative TCM_036510, Description = ATP-dependent protease La domain-containing protein isoform 1, PFAM = PF02190)' T '29.5' 'protein.degradation' 'niben101scf08533_59698-64808' '(at4g22720 : 423.0) Actin-like ATPase superfamily protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M22, glycoprotease (InterPro:IPR000905), Peptidase M22, glycoprotease, subgroup (InterPro:IPR017861); BEST Arabidopsis thaliana protein match is: glycoprotease 1 (TAIR:AT2G45270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37919 : 415.0) no description available & (gnl|cdd|83106 : 305.0) no description available & (reliability: 846.0) & (original description: Putative gcp, Description = O-sialoglycoprotein endopeptidase, PFAM = PF00814)' T '29.5' 'protein.degradation' 'niben101scf08566_201527-204833' '(at1g02170 : 297.0) Metacaspase AtMCP1b. Arginine/lysine-specific cysteine protease activity. Induces apoptosis in yeast. Contains Pfam profile PF00656: ICE-like protease (caspase) p20 domain; metacaspase 1 (AMC1); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis, induction of apoptosis; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735), Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 2 (TAIR:AT4G25110.1); Has 1179 Blast hits to 1148 proteins in 266 species: Archae - 3; Bacteria - 262; Metazoa - 3; Fungi - 268; Plants - 419; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|36759 : 291.0) no description available & (gnl|cdd|84933 : 127.0) no description available & (reliability: 594.0) & (original description: Putative AMC3, Description = Metacaspase-3, PFAM = PF00656)' T '29.5' 'protein.degradation' 'niben101scf08672_443934-460445' '(at4g17830 : 759.0) Peptidase M20/M25/M40 family protein; FUNCTIONS IN: metallopeptidase activity, hydrolase activity; INVOLVED IN: proteolysis, metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20, dimerisation (InterPro:IPR011650). & (gnl|cdd|37487 : 372.0) no description available & (gnl|cdd|85524 : 139.0) no description available & (reliability: 1518.0) & (original description: Putative aodD, Description = Acetylornithine deacetylase, PFAM = PF01546;PF07687)' T '29.5' 'protein.degradation' 'niben101scf08724_59161-66417' '(at3g51800 : 525.0) putative nuclear DNA-binding protein G2p (AtG2) mRNA,; ATG2; FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, cellular process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24, structural domain (InterPro:IPR000994), Proliferation-associated protein 1 (InterPro:IPR004545), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 2A (TAIR:AT2G44180.1). & (gnl|cdd|37987 : 440.0) no description available & (gnl|cdd|73244 : 234.0) no description available & (reliability: 1050.0) & (original description: Putative EBP1, Description = ERBB-3 BINDING PROTEIN 1, PFAM = PF00557)' T '29.5' 'protein.degradation' 'niben101scf08783_125280-130632' '(at3g26085 : 276.0) CAAX amino terminal protease family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675). & (reliability: 552.0) & (original description: Putative BnaC07g23210D, Description = BnaC07g23210D protein, PFAM = PF02517)' T '29.5' 'protein.degradation' 'niben101scf08804_180958-205625' '(at5g42390 : 1776.0) Insulinase (Peptidase family M16) family protein; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding; INVOLVED IN: proteolysis; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) protein (TAIR:AT5G56730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36177 : 378.0) no description available & (gnl|cdd|30957 : 141.0) no description available & (reliability: 3552.0) & (original description: Putative SPP, Description = Stromal processing peptidase, chloroplastic, PFAM = PF05193;PF05193;PF00675)' T '29.5' 'protein.degradation' 'niben101scf08806_180970-185780' '(at1g67700 : 316.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 632.0) & (original description: Putative HHL1, Description = Protein HHL1, chloroplastic, PFAM = )' T '29.5' 'protein.degradation' 'niben101scf08817_195923-214843' '(at1g01650 : 756.0) SIGNAL PEPTIDE PEPTIDASE-LIKE 4 (SPPL4); FUNCTIONS IN: peptidase activity, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22B, signal peptide peptidase (InterPro:IPR007369); BEST Arabidopsis thaliana protein match is: SIGNAL PEPTIDE PEPTIDASE-LIKE 2 (TAIR:AT1G63690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37653 : 592.0) no description available & (gnl|cdd|67855 : 262.0) no description available & (reliability: 1512.0) & (original description: Putative SPPL4, Description = Signal peptide peptidase-like 4, PFAM = PF02225;PF04258)' T '29.5' 'protein.degradation' 'niben101scf08975_14350-26518' '(at3g08980 : 188.0) Peptidase S24/S26A/S26B/S26C family protein; FUNCTIONS IN: serine-type peptidase activity, peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (InterPro:IPR011056), Peptidase S24/S26A/S26B, conserved region (InterPro:IPR019759), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927), Peptidase S26A, signal peptidase I (InterPro:IPR000223); BEST Arabidopsis thaliana protein match is: Peptidase S24/S26A/S26B/S26C family protein (TAIR:AT1G53530.1); Has 4114 Blast hits to 4113 proteins in 1108 species: Archae - 0; Bacteria - 2962; Metazoa - 240; Fungi - 231; Plants - 274; Viruses - 0; Other Eukaryotes - 407 (source: NCBI BLink). & (gnl|cdd|36781 : 158.0) no description available & (reliability: 376.0) & (original description: Putative BD4, Description = OssigP3, PFAM = PF00717;PF10502)' T '29.5' 'protein.degradation' 'niben101scf09004_185142-201085' '(at2g03120 : 479.0) homologous to Signal Peptide Peptidases (SPP), required for pollen development and pollen germination. No homozygotes could be recovered from a T-DNA insertion mutant.; signal peptide peptidase (SPP); FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: pollen germination, pollen development; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22B, signal peptide peptidase (InterPro:IPR007369); BEST Arabidopsis thaliana protein match is: SIGNAL PEPTIDE PEPTIDASE-LIKE 1 (TAIR:AT4G33410.1); Has 989 Blast hits to 959 proteins in 196 species: Archae - 4; Bacteria - 0; Metazoa - 468; Fungi - 136; Plants - 243; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|37654 : 332.0) no description available & (gnl|cdd|67855 : 249.0) no description available & (reliability: 958.0) & (original description: Putative SPP, Description = Signal peptide peptidase, PFAM = PF04258)' T '29.5' 'protein.degradation' 'niben101scf09075_34402-41022' '(at5g65760 : 726.0) Serine carboxypeptidase S28 family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S28 (InterPro:IPR008758); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G24280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37394 : 625.0) no description available & (gnl|cdd|86891 : 264.0) no description available & (reliability: 1452.0) & (original description: Putative PRCP, Description = Lysosomal Pro-X carboxypeptidase, PFAM = PF05577)' T '29.5' 'protein.degradation' 'niben101scf09088_19494-26270' '(at2g03120 : 507.0) homologous to Signal Peptide Peptidases (SPP), required for pollen development and pollen germination. No homozygotes could be recovered from a T-DNA insertion mutant.; signal peptide peptidase (SPP); FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: pollen germination, pollen development; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22B, signal peptide peptidase (InterPro:IPR007369); BEST Arabidopsis thaliana protein match is: SIGNAL PEPTIDE PEPTIDASE-LIKE 1 (TAIR:AT4G33410.1); Has 989 Blast hits to 959 proteins in 196 species: Archae - 4; Bacteria - 0; Metazoa - 468; Fungi - 136; Plants - 243; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|37654 : 331.0) no description available & (gnl|cdd|67855 : 248.0) no description available & (reliability: 1014.0) & (original description: Putative asp1, Description = Putative aspartic protease A22B, PFAM = PF04258)' T '29.5' 'protein.degradation' 'niben101scf09132_47975-53224' '(at4g34360 : 356.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G60910.1); Has 2390 Blast hits to 2390 proteins in 771 species: Archae - 92; Bacteria - 1226; Metazoa - 381; Fungi - 88; Plants - 206; Viruses - 0; Other Eukaryotes - 397 (source: NCBI BLink). & (gnl|cdd|37563 : 177.0) no description available & (reliability: 712.0) & (original description: Putative At4g34360, Description = At4g34360, PFAM = PF13847)' T '29.5' 'protein.degradation' 'niben101scf09140_186144-197864' '(at3g54720 : 739.0) Encodes glutamate carboxypeptidase. Various alleles show-increased cotyledon number and rate of leaf initiation, show transformation of leaves to cotyledons, altered flowering time and photomorphogenesis and an increased level of cytokinin biosynthesis. Involved in ethylene enhanced hypocotyl elongation in the light. Strong genetic interaction between TGH and AMP1.; ALTERED MERISTEM PROGRAM 1 (AMP1); CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Transferrin receptor-like, dimerisation (InterPro:IPR007365), Peptidase M28 (InterPro:IPR007484); BEST Arabidopsis thaliana protein match is: Peptidase M28 family protein (TAIR:AT5G19740.1); Has 3363 Blast hits to 3338 proteins in 594 species: Archae - 10; Bacteria - 1310; Metazoa - 699; Fungi - 446; Plants - 316; Viruses - 0; Other Eukaryotes - 582 (source: NCBI BLink). & (gnl|cdd|37406 : 468.0) no description available & (gnl|cdd|80343 : 136.0) no description available & (reliability: 1478.0) & (original description: Putative AMP1, Description = Probable glutamate carboxypeptidase 2, PFAM = PF04253;PF04389)' T '29.5' 'protein.degradation' 'niben101scf09156_125103-129627' '(at1g71696 : 300.0) Encodes a Putative Zn2+ carboxypeptidase, 4 splice variants have been identified but not characterized for different functions and/or expression patterns.SOL1 isolated as a suppressor of root- specific overexpression of CLE19, a clavata3 like gene. sol1 partially suppresses the short root phenotype caused by CLE19 overexpression.; SUPPRESSOR OF LLP1 1 (SOL1); FUNCTIONS IN: metallocarboxypeptidase activity, carboxypeptidase activity, zinc ion binding; INVOLVED IN: regulation of root meristem growth; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Carboxypeptidase-like, regulatory domain (InterPro:IPR008969), Peptidase M14, carboxypeptidase A (InterPro:IPR000834), Carboxypeptidase, regulatory domain (InterPro:IPR014766); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37860 : 219.0) no description available & (gnl|cdd|84641 : 102.0) no description available & (reliability: 600.0) & (original description: Putative Os06g0144600, Description = Os06g0144600 protein, PFAM = PF00246)' T '29.5' 'protein.degradation' 'niben101scf09317_234339-244287' '(at4g17510 : 352.0) ubiquitin C-terminal hydrolase 3 (UCH3); FUNCTIONS IN: ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (InterPro:IPR001578); BEST Arabidopsis thaliana protein match is: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (TAIR:AT1G65650.1); Has 1294 Blast hits to 1288 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 624; Fungi - 359; Plants - 155; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (gnl|cdd|36629 : 285.0) no description available & (gnl|cdd|85235 : 224.0) no description available & (reliability: 704.0) & (original description: Putative UCH3, Description = Ubiquitin carboxyl-terminal hydrolase 3, PFAM = PF01088)' T '29.5' 'protein.degradation' 'niben101scf09512_150794-158388' '(at3g61540 : 637.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: peptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S33, prolyl aminopeptidase (InterPro:IPR002410), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); Has 1602 Blast hits to 1599 proteins in 535 species: Archae - 0; Bacteria - 1162; Metazoa - 5; Fungi - 126; Plants - 75; Viruses - 0; Other Eukaryotes - 234 (source: NCBI BLink). & (reliability: 1274.0) & (original description: Putative pip, Description = Putative proline iminopeptidase, PFAM = PF00561)' T '29.5' 'protein.degradation' 'niben101scf09590_43768-47558' '(at4g22150 : 218.0) Arabidopsis thaliana CDC48-interacting UBX-domain protein (PUX3); plant UBX domain-containing protein 3 (PUX3); INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012), SEP domain (InterPro:IPR012989); BEST Arabidopsis thaliana protein match is: plant UBX domain containing protein 4 (TAIR:AT4G04210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37297 : 196.0) no description available & (gnl|cdd|47854 : 83.4) no description available & (reliability: 436.0) & (original description: Putative PUX3, Description = CDC48-interacting UBX-domain protein 3, PFAM = PF08059;PF00789)' T '29.5' 'protein.degradation' 'niben101scf09590_44117-49859' '(at4g22150 : 316.0) Arabidopsis thaliana CDC48-interacting UBX-domain protein (PUX3); plant UBX domain-containing protein 3 (PUX3); INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012), SEP domain (InterPro:IPR012989); BEST Arabidopsis thaliana protein match is: plant UBX domain containing protein 4 (TAIR:AT4G04210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37297 : 264.0) no description available & (gnl|cdd|47854 : 108.0) no description available & (reliability: 632.0) & (original description: Putative PUX4, Description = Plant UBX domain-containing protein 4, PFAM = PF08059;PF00789)' T '29.5' 'protein.degradation' 'niben101scf09599_12637-18051' '(at1g23440 : 323.0) Peptidase C15, pyroglutamyl peptidase I-like; CONTAINS InterPro DOMAIN/s: Peptidase C15, pyroglutamyl peptidase I-like (InterPro:IPR016125); BEST Arabidopsis thaliana protein match is: Peptidase C15, pyroglutamyl peptidase I-like (TAIR:AT1G56700.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39952 : 154.0) no description available & (gnl|cdd|29606 : 137.0) no description available & (reliability: 646.0) & (original description: Putative At1g23430, Description = Peptidase C15, pyroglutamyl peptidase I-like protein, PFAM = PF01470)' T '29.5' 'protein.degradation' 'niben101scf09708_167480-179291' '(at4g20310 : 332.0) Peptidase M50 family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M50 (InterPro:IPR008915); Has 156 Blast hits to 154 proteins in 70 species: Archae - 19; Bacteria - 0; Metazoa - 104; Fungi - 2; Plants - 26; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|38132 : 200.0) no description available & (reliability: 664.0) & (original description: Putative S2P, Description = Membrane-bound transcription factor site-2 protease homolog, PFAM = PF02163)' T '29.5' 'protein.degradation' 'niben101scf09976_4292-9729' '(at5g60750 : 382.0) CAAX amino terminal protease family protein; FUNCTIONS IN: endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: CAAX amino terminal protease family protein (TAIR:AT1G14270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 764.0) & (original description: Putative At5g60750, Description = CAAX amino terminal protease family protein, PFAM = PF02517)' T '29.5' 'protein.degradation' 'niben101scf09996_166544-171664' '(at3g13510 : 691.0) Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G55360.1); Has 759 Blast hits to 705 proteins in 28 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 10; Plants - 734; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66735 : 271.0) no description available & (reliability: 1378.0) & (original description: Putative NIP1, Description = NEP-interacting protein 1, PFAM = PF03080;PF14365)' T '29.5' 'protein.degradation' 'niben101scf10222_905811-915116' '(at2g23010 : 459.0) serine carboxypeptidase-like 9 (SCPL9); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: sinapoylglucose 1 (TAIR:AT2G22990.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36496 : 424.0) no description available & (gnl|cdd|84781 : 396.0) no description available & (p07519|cbp1_horvu : 335.0) Serine carboxypeptidase 1 precursor (EC 3.4.16.5) (Serine carboxypeptidase I) (Carboxypeptidase C) (CP-MI) [Contains: Serine carboxypeptidase 1 chain A (Serine carboxypeptidase I chain A); Serine carboxypeptidase 1 chain B (Serine carbo & (reliability: 914.0) & (original description: Putative SCPL9, Description = Serine carboxypeptidase-like 9, PFAM = PF00450)' T '29.5' 'protein.degradation' 'niben101scf10224_247304-256907' '(at5g22760 : 608.0) PHD finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain (InterPro:IPR004022), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Zinc finger, PHD-type (InterPro:IPR001965), DDT domain superfamily (InterPro:IPR018501), DDT domain, subgroup (InterPro:IPR018500), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: metalloendopeptidases;zinc ion binding;DNA binding (TAIR:AT5G35210.2); Has 3640 Blast hits to 3265 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 2369; Fungi - 398; Plants - 598; Viruses - 0; Other Eukaryotes - 275 (source: NCBI BLink). & (gnl|cdd|36686 : 351.0) no description available & (reliability: 1150.0) & (original description: Putative At5g22760, Description = Nucleosome-remodeling factor subunit BPTF, PFAM = PF15612;PF00628;PF02791)' T '29.5' 'protein.degradation' 'niben101scf10329_119263-127374' '(at1g67690 : 218.0) Zincin-like metalloproteases family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M3A/M3B, thimet/oligopeptidase F (InterPro:IPR001567); BEST Arabidopsis thaliana protein match is: Zincin-like metalloproteases family protein (TAIR:AT5G51540.1); Has 5194 Blast hits to 5176 proteins in 1382 species: Archae - 6; Bacteria - 3154; Metazoa - 337; Fungi - 406; Plants - 147; Viruses - 0; Other Eukaryotes - 1144 (source: NCBI BLink). & (gnl|cdd|37300 : 139.0) no description available & (reliability: 436.0) & (original description: Putative si683006e11, Description = Thimet oligopeptidase, PFAM = )' T '29.5' 'protein.degradation' 'niben101scf10386_104157-129685' '(at4g14570 : 880.0) acylaminoacyl-peptidase-related; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G36210.1); Has 9037 Blast hits to 9017 proteins in 1444 species: Archae - 238; Bacteria - 5246; Metazoa - 1023; Fungi - 365; Plants - 298; Viruses - 0; Other Eukaryotes - 1867 (source: NCBI BLink). & (gnl|cdd|31695 : 172.0) no description available & (gnl|cdd|37311 : 167.0) no description available & (reliability: 1760.0) & (original description: Putative Os10g0415600, Description = Acylamino-acid-releasing enzyme 1, PFAM = PF00326)' T '29.5' 'protein.degradation' 'niben101scf10386_113924-116529' '(at4g14570 : 176.0) acylaminoacyl-peptidase-related; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G36210.1); Has 9037 Blast hits to 9017 proteins in 1444 species: Archae - 238; Bacteria - 5246; Metazoa - 1023; Fungi - 365; Plants - 298; Viruses - 0; Other Eukaryotes - 1867 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative AARE, Description = Acylamino-acid-releasing enzyme, PFAM = )' T '29.5' 'protein.degradation' 'niben101scf11738_164728-174689' '(at1g63770 : 1536.0) Peptidase M1 family protein; FUNCTIONS IN: metallopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782), Peptidase M1, alanyl aminopeptidase (InterPro:IPR012779); BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1). & (gnl|cdd|30656 : 600.0) no description available & (gnl|cdd|36264 : 412.0) no description available & (reliability: 3072.0) & (original description: Putative pepN, Description = Aminopeptidase N, PFAM = PF11940;PF01433;PF17432)' T '29.5' 'protein.degradation' 'niben101scf12159_504869-510328' '(at5g26110 : 367.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Kinase-associated endopeptidase 1, Bud32 (InterPro:IPR022495), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38297 : 263.0) no description available & (gnl|cdd|33440 : 213.0) no description available & (reliability: 734.0) & (original description: Putative bud32, Description = EKC/KEOPS complex subunit bud32, PFAM = PF00069)' T '29.5' 'protein.degradation' 'niben101scf12383_143148-162975' '(at1g60220 : 330.0) Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sGFP:OTS1 protein accumulates in the nucleus. Double mutant analysis with ULP1C/OTS2 indicates that these genes are involved in salt stress responses and flowering time regulation. Over-expression of 35S:OTS1 increases salt tolerance and reduces the level of SUMO-conjugated proteins. OTS1 transcript levels do not appear to change in response to salt, but, salt stress reduces the level of OTS1 protein in a proteasome-dependent manner.; UB-like protease 1D (ULP1D); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G10570.2); Has 2556 Blast hits to 2339 proteins in 246 species: Archae - 0; Bacteria - 12; Metazoa - 1276; Fungi - 441; Plants - 318; Viruses - 13; Other Eukaryotes - 496 (source: NCBI BLink). & (gnl|cdd|35998 : 158.0) no description available & (gnl|cdd|34761 : 119.0) no description available & (reliability: 632.0) & (original description: Putative OTS1, Description = Putative ulp1 protease, PFAM = PF02902)' T '29.5' 'protein.degradation' 'niben101scf13571_332421-372552' '(at1g50380 : 1121.0) Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106), Peptidase S9A, prolyl oligopeptidase (InterPro:IPR002470); BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT1G69020.1); Has 7641 Blast hits to 7556 proteins in 1214 species: Archae - 80; Bacteria - 3203; Metazoa - 306; Fungi - 27; Plants - 212; Viruses - 0; Other Eukaryotes - 3813 (source: NCBI BLink). & (gnl|cdd|31956 : 771.0) no description available & (gnl|cdd|37448 : 718.0) no description available & (reliability: 2242.0) & (original description: Putative ptrB, Description = Protease 2, PFAM = PF00326;PF02897)' T '29.5' 'protein.degradation' 'niben101scf13622_2604-15465' '(at4g22150 : 319.0) Arabidopsis thaliana CDC48-interacting UBX-domain protein (PUX3); plant UBX domain-containing protein 3 (PUX3); INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012), SEP domain (InterPro:IPR012989); BEST Arabidopsis thaliana protein match is: plant UBX domain containing protein 4 (TAIR:AT4G04210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37297 : 253.0) no description available & (gnl|cdd|47854 : 109.0) no description available & (reliability: 638.0) & (original description: Putative PUX3, Description = Plant UBX domain-containing protein 3, PFAM = PF08059;PF00789)' T '29.5' 'protein.degradation' 'niben101scf13710_356969-363258' '(at4g36800 : 273.0) RUB1 conjugating enzyme that conjugates CUL1 and is involved in auxin response and embryogenesis. RCE1 protein physically interacts with RBX1, which may be the E3 for CUL1.; RUB1 conjugating enzyme 1 (RCE1); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), RUB1 conjugating enzyme Ubc12 (InterPro:IPR015580); BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein (TAIR:AT2G18600.1); Has 8473 Blast hits to 8470 proteins in 386 species: Archae - 0; Bacteria - 0; Metazoa - 3871; Fungi - 1731; Plants - 1533; Viruses - 20; Other Eukaryotes - 1318 (source: NCBI BLink). & (gnl|cdd|35641 : 243.0) no description available & (gnl|cdd|34682 : 130.0) no description available & (reliability: 536.0) & (original description: Putative RCE1, Description = NEDD8-conjugating enzyme Ubc12, PFAM = PF00179)' T '29.5' 'protein.degradation' 'niben101scf15766_30641-45929' '(at5g13520 : 885.0) peptidase M1 family protein; FUNCTIONS IN: metallopeptidase activity, binding, zinc ion binding; INVOLVED IN: proteolysis, leukotriene biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782), Peptidase M1, leukotriene A4 hydrolase, aminopeptidase C-terminal (InterPro:IPR015211), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36265 : 620.0) no description available & (gnl|cdd|30656 : 215.0) no description available & (reliability: 1770.0) & (original description: Putative LKHA4, Description = Leukotriene A-4 hydrolase, PFAM = PF01433;PF09127)' T '29.5' 'protein.degradation' 'niben101scf20077_1-13713' '(at1g71696 : 232.0) Encodes a Putative Zn2+ carboxypeptidase, 4 splice variants have been identified but not characterized for different functions and/or expression patterns.SOL1 isolated as a suppressor of root- specific overexpression of CLE19, a clavata3 like gene. sol1 partially suppresses the short root phenotype caused by CLE19 overexpression.; SUPPRESSOR OF LLP1 1 (SOL1); FUNCTIONS IN: metallocarboxypeptidase activity, carboxypeptidase activity, zinc ion binding; INVOLVED IN: regulation of root meristem growth; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Carboxypeptidase-like, regulatory domain (InterPro:IPR008969), Peptidase M14, carboxypeptidase A (InterPro:IPR000834), Carboxypeptidase, regulatory domain (InterPro:IPR014766); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37860 : 192.0) no description available & (gnl|cdd|47908 : 126.0) no description available & (reliability: 464.0) & (original description: Putative cpd, Description = Carboxypeptidase D, PFAM = PF00246)' T '29.5' 'protein.degradation' 'niben101scf23001_8434-43240' '(at2g45270 : 662.0) Mitochondrial protein essential for embryo development.; glycoprotease 1 (GCP1); FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis, embryo development; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M22, O-sialoglycoprotein peptidase (InterPro:IPR022450), Peptidase M22, glycoprotease (InterPro:IPR000905), Peptidase M22, glycoprotease, subgroup (InterPro:IPR017861); BEST Arabidopsis thaliana protein match is: Actin-like ATPase superfamily protein (TAIR:AT4G22720.2); Has 11122 Blast hits to 11085 proteins in 2922 species: Archae - 268; Bacteria - 6121; Metazoa - 269; Fungi - 294; Plants - 213; Viruses - 0; Other Eukaryotes - 3957 (source: NCBI BLink). & (gnl|cdd|37918 : 440.0) no description available & (gnl|cdd|83105 : 378.0) no description available & (reliability: 1324.0) & (original description: Putative gcp, Description = tRNA N6-adenosine threonylcarbamoyltransferase, PFAM = PF00814)' T '29.5' 'protein.degradation' 'niben101scf23443_4223-10431' '(at4g38100 : 113.0) unknown protein; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative CURT1D, Description = BnaC03g61060D protein, PFAM = PF14159)' T '29.5.1' 'protein.degradation.subtilases' 'nbv0.3scaffold28543_2372-15722' '(at4g34980 : 97.8) Serine protease similar to subtilisin.; subtilisin-like serine protease 2 (SLP2); FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: plant-type cell wall modification, proteolysis; LOCATED IN: middle lamella-containing extracellular matrix, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT3G14240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative SLP2, Description = Subtilisin-like protease, PFAM = )' T '29.5.1' 'protein.degradation.subtilases' 'nbv0.3scaffold44608_12509-16806' '(at5g67360 : 911.0) Encodes a subtilisin-like serine protease essential for mucilage release from seed coats.; ARA12; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, seed coat development, mucilage metabolic process involved seed coat development, mucilage extrusion from seed coat; LOCATED IN: extracellular region, apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT2G05920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80342 : 133.0) no description available & (reliability: 1822.0) & (original description: Putative sp, Description = Putative serine protease, PFAM = PF05922;PF02225;PF00082)' T '29.5.1' 'protein.degradation.subtilases' 'nbv0.3scaffold83571_762-6096' '(at2g05920 : 1001.0) Subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G67360.1); Has 7371 Blast hits to 6472 proteins in 1023 species: Archae - 222; Bacteria - 3849; Metazoa - 147; Fungi - 727; Plants - 1890; Viruses - 0; Other Eukaryotes - 536 (source: NCBI BLink). & (gnl|cdd|80342 : 130.0) no description available & (reliability: 2002.0) & (original description: Putative sbt1, Description = Subtilisin-like protease, PFAM = PF00082;PF05922;PF02225)' T '29.5.1' 'protein.degradation.subtilases' 'nbv0.5scaffold1163_22-45455' '(at1g62340 : 902.0) Subtilisin-like serine protease required for epidermal surface formation in embryos and juvenile plants; ABNORMAL LEAF-SHAPE 1 (ALE1); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, cuticle development; LOCATED IN: endomembrane system, cell wall, membrane; EXPRESSED IN: embryo, endosperm; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8A, DUF1034 C-terminal (InterPro:IPR010435), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8, subtilisin-related (InterPro:IPR015500); BEST Arabidopsis thaliana protein match is: subtilisin-like serine protease 3 (TAIR:AT2G19170.1); Has 6975 Blast hits to 6033 proteins in 1018 species: Archae - 173; Bacteria - 4150; Metazoa - 21; Fungi - 269; Plants - 1839; Viruses - 0; Other Eukaryotes - 523 (source: NCBI BLink). & (reliability: 1804.0) & (original description: Putative ALE1, Description = Subtilisin-like protease, PFAM = PF00082;PF05922)' T '29.5.1' 'protein.degradation.subtilases' 'nbv0.5scaffold2700_39395-43752' '(at3g14240 : 1087.0) Subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: subtilisin-like serine protease 2 (TAIR:AT4G34980.1); Has 8878 Blast hits to 7637 proteins in 1214 species: Archae - 263; Bacteria - 5045; Metazoa - 160; Fungi - 690; Plants - 1978; Viruses - 0; Other Eukaryotes - 742 (source: NCBI BLink). & (gnl|cdd|80342 : 120.0) no description available & (reliability: 2174.0) & (original description: Putative sbt1, Description = Subtilisin-like protease, PFAM = PF00082;PF02225;PF05922)' T '29.5.1' 'protein.degradation.subtilases' 'nbv0.5scaffold3272_191000-195270' '(at5g67090 : 550.0) Subtilisin-like serine endopeptidase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT3G14240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1100.0) & (original description: Putative cg12, Description = Subtilase, PFAM = PF05922;PF00082)' T '29.5.1' 'protein.degradation.subtilases' 'nbv0.5scaffold4039_87458-89924' '(at5g59810 : 103.0) SBT5.4; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT2G04160.1); Has 6522 Blast hits to 5856 proteins in 960 species: Archae - 194; Bacteria - 3635; Metazoa - 89; Fungi - 206; Plants - 1959; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink). & (gnl|cdd|80342 : 94.8) no description available & (reliability: 206.0) & (original description: Putative AIR3, Description = Subtilisin-like protease, PFAM = PF02225)' T '29.5.1' 'protein.degradation.subtilases' 'niben044scf00001236ctg017_1-3797' '(at5g67360 : 552.0) Encodes a subtilisin-like serine protease essential for mucilage release from seed coats.; ARA12; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, seed coat development, mucilage metabolic process involved seed coat development, mucilage extrusion from seed coat; LOCATED IN: extracellular region, apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT2G05920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80342 : 123.0) no description available & (reliability: 1104.0) & (original description: Putative p69f, Description = P69F protein, PFAM = PF05922;PF00082;PF02225)' T '29.5.1' 'protein.degradation.subtilases' 'niben044scf00001425ctg020_474-2986' '(at5g03620 : 129.0) Subtilisin-like serine endopeptidase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Peptidase S8, subtilisin-related (InterPro:IPR015500); BEST Arabidopsis thaliana protein match is: xylem serine peptidase 1 (TAIR:AT4G00230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative PGSC0003DMG400008957, Description = Xylem serine proteinase 1, PFAM = )' T '29.5.1' 'protein.degradation.subtilases' 'niben044scf00008444ctg002_6756-14148' '(at5g03620 : 753.0) Subtilisin-like serine endopeptidase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Peptidase S8, subtilisin-related (InterPro:IPR015500); BEST Arabidopsis thaliana protein match is: xylem serine peptidase 1 (TAIR:AT4G00230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1506.0) & (original description: Putative XSP1, Description = Cucumisin, PFAM = PF05922;PF00082)' T '29.5.1' 'protein.degradation.subtilases' 'niben044scf00014176ctg003_22102-26438' '(at5g51750 : 1060.0) subtilase 1.3 (SBT1.3); FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: apoplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G67360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80342 : 120.0) no description available & (reliability: 2120.0) & (original description: Putative sbt1, Description = Subtilisin-like protease, PFAM = PF00082;PF05922;PF02225)' T '29.5.1' 'protein.degradation.subtilases' 'niben044scf00017912ctg024_3454-6416' '(at2g05920 : 498.0) Subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G67360.1); Has 7371 Blast hits to 6472 proteins in 1023 species: Archae - 222; Bacteria - 3849; Metazoa - 147; Fungi - 727; Plants - 1890; Viruses - 0; Other Eukaryotes - 536 (source: NCBI BLink). & (gnl|cdd|80342 : 115.0) no description available & (reliability: 996.0) & (original description: Putative p69a, Description = Xylem serine proteinase 1, putative, PFAM = PF00082;PF02225)' T '29.5.1' 'protein.degradation.subtilases' 'niben044scf00034193ctg005_7802-15125' '(at1g20160 : 748.0) ATSBT5.2; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT1G20150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84501 : 84.3) no description available & (reliability: 1496.0) & (original description: Putative CRSP, Description = CO(2)-response secreted protease, PFAM = PF02225;PF00082;PF05922)' T '29.5.1' 'protein.degradation.subtilases' 'niben044scf00060293ctg001_1-3565' '(at1g04110 : 534.0) Initially identified as a mutation affecting stomatal development and distribution. Encodes a protein similar to serine proteases.; STOMATAL DENSITY AND DISTRIBUTION (SDD1); CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT2G05920.1); Has 8825 Blast hits to 7601 proteins in 1230 species: Archae - 300; Bacteria - 5187; Metazoa - 188; Fungi - 495; Plants - 1932; Viruses - 0; Other Eukaryotes - 723 (source: NCBI BLink). & (gnl|cdd|80342 : 109.0) no description available & (reliability: 1068.0) & (original description: Putative p69f, Description = P69F protein, PFAM = PF02225;PF05922;PF00082)' T '29.5.1' 'protein.degradation.subtilases' 'niben101ctg15998_69-4581' '(at5g67090 : 649.0) Subtilisin-like serine endopeptidase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT3G14240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1298.0) & (original description: Putative ag12, Description = Subtilisin-like protease, PFAM = PF00082;PF05922)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf00271_702207-712445' '(at4g20430 : 1089.0) Subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Peptidase S8, subtilisin-related (InterPro:IPR015500), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G44530.1). & (gnl|cdd|84501 : 89.3) no description available & (reliability: 2178.0) & (original description: Putative LIM9, Description = Subtilisin-like protease, PFAM = PF05922;PF00082)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf00490_28128-31966' '(at1g04110 : 558.0) Initially identified as a mutation affecting stomatal development and distribution. Encodes a protein similar to serine proteases.; STOMATAL DENSITY AND DISTRIBUTION (SDD1); CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT2G05920.1); Has 8825 Blast hits to 7601 proteins in 1230 species: Archae - 300; Bacteria - 5187; Metazoa - 188; Fungi - 495; Plants - 1932; Viruses - 0; Other Eukaryotes - 723 (source: NCBI BLink). & (gnl|cdd|80342 : 123.0) no description available & (reliability: 1116.0) & (original description: Putative Sbt, Description = Subtilase, PFAM = PF05922;PF00082;PF02225)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf00539_195200-210934' '(at1g20160 : 155.0) ATSBT5.2; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT1G20150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative scs1, Description = Subtilisin-like protease, PFAM = PF02225;PF05922)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf00709_804981-809284' '(at5g67360 : 1047.0) Encodes a subtilisin-like serine protease essential for mucilage release from seed coats.; ARA12; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, seed coat development, mucilage metabolic process involved seed coat development, mucilage extrusion from seed coat; LOCATED IN: extracellular region, apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT2G05920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80342 : 133.0) no description available & (reliability: 2094.0) & (original description: Putative sbt1, Description = Subtilisin-like protease, PFAM = PF05922;PF00082;PF02225)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf00726_294733-299112' '(at5g67090 : 487.0) Subtilisin-like serine endopeptidase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT3G14240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 974.0) & (original description: Putative sbt3, Description = Subtilisin-like protease, PFAM = PF00082;PF05922)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf00803_245623-251051' '(at5g67360 : 1034.0) Encodes a subtilisin-like serine protease essential for mucilage release from seed coats.; ARA12; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, seed coat development, mucilage metabolic process involved seed coat development, mucilage extrusion from seed coat; LOCATED IN: extracellular region, apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT2G05920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80342 : 133.0) no description available & (reliability: 2068.0) & (original description: Putative sbt1, Description = Subtilisin-like protease, PFAM = PF05922;PF00082;PF02225)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf00870_1222072-1226420' '(at3g14067 : 987.0) Subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: apoplast, plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G67360.1); Has 8271 Blast hits to 7174 proteins in 1143 species: Archae - 230; Bacteria - 4646; Metazoa - 71; Fungi - 664; Plants - 1990; Viruses - 0; Other Eukaryotes - 670 (source: NCBI BLink). & (gnl|cdd|80342 : 127.0) no description available & (reliability: 1974.0) & (original description: Putative sbt1, Description = Subtilisin-like protease, PFAM = PF02225;PF00082;PF05922)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf01072_430222-434476' '(at2g19170 : 589.0) Encodes a novel subtilisin-like serine protease.; subtilisin-like serine protease 3 (SLP3); FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: middle lamella-containing extracellular matrix; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8A, DUF1034 C-terminal (InterPro:IPR010435), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: PA-domain containing subtilase family protein (TAIR:AT4G30020.1); Has 7824 Blast hits to 6803 proteins in 1147 species: Archae - 185; Bacteria - 4676; Metazoa - 73; Fungi - 358; Plants - 1850; Viruses - 0; Other Eukaryotes - 682 (source: NCBI BLink). & (reliability: 1178.0) & (original description: Putative ALE1, Description = Subtilisin-like protease, PFAM = PF00082;PF05922)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf01203_9783-13960' '(at1g04110 : 538.0) Initially identified as a mutation affecting stomatal development and distribution. Encodes a protein similar to serine proteases.; STOMATAL DENSITY AND DISTRIBUTION (SDD1); CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT2G05920.1); Has 8825 Blast hits to 7601 proteins in 1230 species: Archae - 300; Bacteria - 5187; Metazoa - 188; Fungi - 495; Plants - 1932; Viruses - 0; Other Eukaryotes - 723 (source: NCBI BLink). & (gnl|cdd|80342 : 102.0) no description available & (reliability: 1076.0) & (original description: Putative p69a, Description = Xylem serine proteinase 1, putative, PFAM = PF05922;PF00082;PF02225)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf01267_222830-276805' '(at1g62340 : 902.0) Subtilisin-like serine protease required for epidermal surface formation in embryos and juvenile plants; ABNORMAL LEAF-SHAPE 1 (ALE1); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, cuticle development; LOCATED IN: endomembrane system, cell wall, membrane; EXPRESSED IN: embryo, endosperm; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8A, DUF1034 C-terminal (InterPro:IPR010435), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8, subtilisin-related (InterPro:IPR015500); BEST Arabidopsis thaliana protein match is: subtilisin-like serine protease 3 (TAIR:AT2G19170.1); Has 6975 Blast hits to 6033 proteins in 1018 species: Archae - 173; Bacteria - 4150; Metazoa - 21; Fungi - 269; Plants - 1839; Viruses - 0; Other Eukaryotes - 523 (source: NCBI BLink). & (reliability: 1804.0) & (original description: Putative ALE1, Description = Subtilisin-like protease, PFAM = PF05922;PF00082)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf01729_105748-110006' '(at5g67360 : 543.0) Encodes a subtilisin-like serine protease essential for mucilage release from seed coats.; ARA12; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, seed coat development, mucilage metabolic process involved seed coat development, mucilage extrusion from seed coat; LOCATED IN: extracellular region, apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT2G05920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80342 : 109.0) no description available & (reliability: 1086.0) & (original description: Putative p69f, Description = P69F protein, PFAM = PF00082;PF05922;PF02225)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf02094_26175-31463' '(at1g04110 : 536.0) Initially identified as a mutation affecting stomatal development and distribution. Encodes a protein similar to serine proteases.; STOMATAL DENSITY AND DISTRIBUTION (SDD1); CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT2G05920.1); Has 8825 Blast hits to 7601 proteins in 1230 species: Archae - 300; Bacteria - 5187; Metazoa - 188; Fungi - 495; Plants - 1932; Viruses - 0; Other Eukaryotes - 723 (source: NCBI BLink). & (gnl|cdd|80342 : 122.0) no description available & (reliability: 1072.0) & (original description: Putative p69c, Description = P69C protein, PFAM = PF00082;PF05922;PF02225)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf02351_179542-191505' '(at2g04160 : 856.0) isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein similar to subtilisin-like serine protease which is believed to be active outside the plant cell.; AUXIN-INDUCED IN ROOT CULTURES 3 (AIR3); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, response to auxin stimulus, lateral root morphogenesis; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G59810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80342 : 89.0) no description available & (reliability: 1712.0) & (original description: Putative AIR3, Description = Subtilisin-like protease SBT5.3, PFAM = PF00082;PF05922)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf02531_234561-238786' '(at1g04110 : 578.0) Initially identified as a mutation affecting stomatal development and distribution. Encodes a protein similar to serine proteases.; STOMATAL DENSITY AND DISTRIBUTION (SDD1); CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT2G05920.1); Has 8825 Blast hits to 7601 proteins in 1230 species: Archae - 300; Bacteria - 5187; Metazoa - 188; Fungi - 495; Plants - 1932; Viruses - 0; Other Eukaryotes - 723 (source: NCBI BLink). & (gnl|cdd|80342 : 103.0) no description available & (reliability: 1156.0) & (original description: Putative Sbt, Description = Subtilase, PFAM = PF00082;PF05922;PF02225)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf02734_25043-30613' '(at4g00230 : 890.0) xylem serine peptidase 1 (XSP1); FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT5G03620.1); Has 8915 Blast hits to 7721 proteins in 1255 species: Archae - 263; Bacteria - 5173; Metazoa - 170; Fungi - 606; Plants - 1952; Viruses - 0; Other Eukaryotes - 751 (source: NCBI BLink). & (reliability: 1780.0) & (original description: Putative XSP1, Description = Cucumisin, PFAM = PF00082;PF05922)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf02734_37763-42205' '(at1g01900 : 786.0) Encodes AtSBT1.1, a subtilisin-like serine protease. Cleaves the phytosulfokine AtPSK4, a growth promoting peptide.; SBTI1.1; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: extracellular matrix, apoplast, cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G67360.1); Has 6944 Blast hits to 6289 proteins in 1039 species: Archae - 198; Bacteria - 3931; Metazoa - 46; Fungi - 433; Plants - 1873; Viruses - 0; Other Eukaryotes - 463 (source: NCBI BLink). & (gnl|cdd|80342 : 118.0) no description available & (reliability: 1572.0) & (original description: Putative sbt1, Description = Subtilisin-like protease, PFAM = PF00082;PF05922;PF02225)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf02941_228122-233854' '(at1g20160 : 753.0) ATSBT5.2; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT1G20150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84501 : 91.3) no description available & (reliability: 1506.0) & (original description: Putative CRSP, Description = CO(2)-response secreted protease, PFAM = PF00082;PF02225;PF05922)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf03253_283378-287681' '(at5g67090 : 518.0) Subtilisin-like serine endopeptidase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT3G14240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1036.0) & (original description: Putative sbt3, Description = Subtilisin-like protease, PFAM = PF00082;PF05922)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf03456_35012-40350' '(at1g04110 : 1008.0) Initially identified as a mutation affecting stomatal development and distribution. Encodes a protein similar to serine proteases.; STOMATAL DENSITY AND DISTRIBUTION (SDD1); CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT2G05920.1); Has 8825 Blast hits to 7601 proteins in 1230 species: Archae - 300; Bacteria - 5187; Metazoa - 188; Fungi - 495; Plants - 1932; Viruses - 0; Other Eukaryotes - 723 (source: NCBI BLink). & (gnl|cdd|80342 : 119.0) no description available & (reliability: 2016.0) & (original description: Putative p69b, Description = Subtilisin-like protease, PFAM = PF05922;PF00082;PF02225)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf03492_29479-40748' '(at4g30020 : 1279.0) PA-domain containing subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system, cell wall, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8A, DUF1034 C-terminal (InterPro:IPR010435), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: subtilisin-like serine protease 3 (TAIR:AT2G19170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2558.0) & (original description: Putative SUB, Description = Subtilase family protein, PFAM = PF00082;PF05922;PF06280)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf03676_328223-331522' '(at1g01900 : 786.0) Encodes AtSBT1.1, a subtilisin-like serine protease. Cleaves the phytosulfokine AtPSK4, a growth promoting peptide.; SBTI1.1; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: extracellular matrix, apoplast, cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G67360.1); Has 6944 Blast hits to 6289 proteins in 1039 species: Archae - 198; Bacteria - 3931; Metazoa - 46; Fungi - 433; Plants - 1873; Viruses - 0; Other Eukaryotes - 463 (source: NCBI BLink). & (gnl|cdd|80342 : 119.0) no description available & (reliability: 1572.0) & (original description: Putative sbt1, Description = Subtilisin-like protease, PFAM = PF05922;PF02225;PF00082)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf03729_296855-329647' '(at4g20430 : 1053.0) Subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Peptidase S8, subtilisin-related (InterPro:IPR015500), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G44530.1). & (gnl|cdd|84501 : 93.2) no description available & (reliability: 2106.0) & (original description: Putative Sb03g035770, Description = Putative uncharacterized protein Sb03g035770, PFAM = PF05922;PF00082)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf03747_153469-158708' '(at5g67360 : 1038.0) Encodes a subtilisin-like serine protease essential for mucilage release from seed coats.; ARA12; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, seed coat development, mucilage metabolic process involved seed coat development, mucilage extrusion from seed coat; LOCATED IN: extracellular region, apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT2G05920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80342 : 133.0) no description available & (reliability: 2076.0) & (original description: Putative sbt1, Description = Subtilisin-like protease, PFAM = PF05922;PF00082;PF02225)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf03998_52804-57134' '(at3g14067 : 932.0) Subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: apoplast, plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G67360.1); Has 8271 Blast hits to 7174 proteins in 1143 species: Archae - 230; Bacteria - 4646; Metazoa - 71; Fungi - 664; Plants - 1990; Viruses - 0; Other Eukaryotes - 670 (source: NCBI BLink). & (gnl|cdd|80342 : 123.0) no description available & (reliability: 1864.0) & (original description: Putative sbt1, Description = Subtilisin-like protease, PFAM = PF02225;PF05922;PF00082)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf04007_500972-505263' '(at5g67090 : 619.0) Subtilisin-like serine endopeptidase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT3G14240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1238.0) & (original description: Putative ag12, Description = Subtilisin-like protease, PFAM = PF00082;PF05922)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf04212_144191-148512' '(at4g34980 : 1088.0) Serine protease similar to subtilisin.; subtilisin-like serine protease 2 (SLP2); FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: plant-type cell wall modification, proteolysis; LOCATED IN: middle lamella-containing extracellular matrix, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT3G14240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80342 : 121.0) no description available & (reliability: 2176.0) & (original description: Putative sbt1, Description = Subtilisin-like protease, PFAM = PF02225;PF00082;PF05922)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf06890_20419-26652' '(at1g20160 : 758.0) ATSBT5.2; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT1G20150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80342 : 86.3) no description available & (reliability: 1516.0) & (original description: Putative CRSP, Description = CO(2)-response secreted protease, PFAM = PF02225;PF05922;PF00082)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf06912_94638-98905' '(at1g04110 : 565.0) Initially identified as a mutation affecting stomatal development and distribution. Encodes a protein similar to serine proteases.; STOMATAL DENSITY AND DISTRIBUTION (SDD1); CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT2G05920.1); Has 8825 Blast hits to 7601 proteins in 1230 species: Archae - 300; Bacteria - 5187; Metazoa - 188; Fungi - 495; Plants - 1932; Viruses - 0; Other Eukaryotes - 723 (source: NCBI BLink). & (gnl|cdd|80342 : 122.0) no description available & (reliability: 1130.0) & (original description: Putative p69a, Description = Xylem serine proteinase 1, putative, PFAM = PF02225;PF05922;PF00082)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf06912_98568-102496' '(at1g04110 : 575.0) Initially identified as a mutation affecting stomatal development and distribution. Encodes a protein similar to serine proteases.; STOMATAL DENSITY AND DISTRIBUTION (SDD1); CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT2G05920.1); Has 8825 Blast hits to 7601 proteins in 1230 species: Archae - 300; Bacteria - 5187; Metazoa - 188; Fungi - 495; Plants - 1932; Viruses - 0; Other Eukaryotes - 723 (source: NCBI BLink). & (gnl|cdd|80342 : 115.0) no description available & (reliability: 1150.0) & (original description: Putative p69f, Description = P69F protein, PFAM = PF05922;PF02225;PF00082)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf06912_139452-143719' '(at1g04110 : 577.0) Initially identified as a mutation affecting stomatal development and distribution. Encodes a protein similar to serine proteases.; STOMATAL DENSITY AND DISTRIBUTION (SDD1); CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT2G05920.1); Has 8825 Blast hits to 7601 proteins in 1230 species: Archae - 300; Bacteria - 5187; Metazoa - 188; Fungi - 495; Plants - 1932; Viruses - 0; Other Eukaryotes - 723 (source: NCBI BLink). & (gnl|cdd|80342 : 120.0) no description available & (reliability: 1154.0) & (original description: Putative p69f, Description = P69F protein, PFAM = PF02225;PF05922;PF00082)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf06998_199972-211167' '(at4g30020 : 1311.0) PA-domain containing subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system, cell wall, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8A, DUF1034 C-terminal (InterPro:IPR010435), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: subtilisin-like serine protease 3 (TAIR:AT2G19170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2622.0) & (original description: Putative ALE1, Description = Subtilisin-like protease, PFAM = PF05922;PF00082;PF02225;PF06280)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf07234_58745-65998' '(at2g04160 : 950.0) isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein similar to subtilisin-like serine protease which is believed to be active outside the plant cell.; AUXIN-INDUCED IN ROOT CULTURES 3 (AIR3); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, response to auxin stimulus, lateral root morphogenesis; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G59810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80342 : 119.0) no description available & (reliability: 1900.0) & (original description: Putative AIR3, Description = Subtilisin-like protease SBT5.3, PFAM = PF02225;PF05922;PF00082)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf07984_417855-424890' '(at2g04160 : 949.0) isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein similar to subtilisin-like serine protease which is believed to be active outside the plant cell.; AUXIN-INDUCED IN ROOT CULTURES 3 (AIR3); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, response to auxin stimulus, lateral root morphogenesis; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G59810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80342 : 119.0) no description available & (reliability: 1898.0) & (original description: Putative AIR3, Description = Subtilisin-like protease SBT5.3, PFAM = PF02225;PF05922;PF00082)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf08195_645987-673250' '(at5g45650 : 847.0) subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT5G45640.1); Has 5973 Blast hits to 5550 proteins in 898 species: Archae - 128; Bacteria - 3248; Metazoa - 41; Fungi - 214; Plants - 1924; Viruses - 0; Other Eukaryotes - 418 (source: NCBI BLink). & (gnl|cdd|80342 : 126.0) no description available & (reliability: 1694.0) & (original description: Putative AIR3, Description = Subtilisin-like protease, PFAM = PF05922;PF02225;PF00082)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf08627_70587-74974' '(at4g34980 : 1078.0) Serine protease similar to subtilisin.; subtilisin-like serine protease 2 (SLP2); FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: plant-type cell wall modification, proteolysis; LOCATED IN: middle lamella-containing extracellular matrix, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT3G14240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80342 : 121.0) no description available & (reliability: 2156.0) & (original description: Putative sbt1, Description = Subtilisin-like protease, PFAM = PF00082;PF02225;PF05922)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf08635_509200-519646' '(at5g59810 : 862.0) SBT5.4; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT2G04160.1); Has 6522 Blast hits to 5856 proteins in 960 species: Archae - 194; Bacteria - 3635; Metazoa - 89; Fungi - 206; Plants - 1959; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink). & (gnl|cdd|80342 : 113.0) no description available & (reliability: 1724.0) & (original description: Putative AIR3, Description = Subtilisin-like protease, PFAM = PF00082;PF05922;PF02225)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf08729_139934-144352' '(at2g05920 : 879.0) Subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G67360.1); Has 7371 Blast hits to 6472 proteins in 1023 species: Archae - 222; Bacteria - 3849; Metazoa - 147; Fungi - 727; Plants - 1890; Viruses - 0; Other Eukaryotes - 536 (source: NCBI BLink). & (gnl|cdd|80342 : 118.0) no description available & (reliability: 1758.0) & (original description: Putative sbt1, Description = Subtilisin-like protease, PFAM = PF00082;PF05922;PF02225)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf09071_9601-13901' '(at1g04110 : 1038.0) Initially identified as a mutation affecting stomatal development and distribution. Encodes a protein similar to serine proteases.; STOMATAL DENSITY AND DISTRIBUTION (SDD1); CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT2G05920.1); Has 8825 Blast hits to 7601 proteins in 1230 species: Archae - 300; Bacteria - 5187; Metazoa - 188; Fungi - 495; Plants - 1932; Viruses - 0; Other Eukaryotes - 723 (source: NCBI BLink). & (gnl|cdd|80342 : 116.0) no description available & (reliability: 2076.0) & (original description: Putative p69b, Description = Subtilisin-like protease, PFAM = PF02225;PF00082;PF05922)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf09492_4872-14854' '(at5g03620 : 155.0) Subtilisin-like serine endopeptidase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Peptidase S8, subtilisin-related (InterPro:IPR015500); BEST Arabidopsis thaliana protein match is: xylem serine peptidase 1 (TAIR:AT4G00230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative XSP1, Description = Cucumisin, PFAM = PF05922)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf10067_3393-7983' '(at5g51750 : 594.0) subtilase 1.3 (SBT1.3); FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: apoplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G67360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84501 : 90.9) no description available & (reliability: 1188.0) & (original description: Putative sbt2, Description = Subtilisin-like protease, PFAM = PF00082;PF05922)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf10675_43656-51794' '(at4g20430 : 1081.0) Subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Peptidase S8, subtilisin-related (InterPro:IPR015500), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G44530.1). & (gnl|cdd|84501 : 88.9) no description available & (reliability: 2162.0) & (original description: Putative LIM9, Description = Subtilisin-like protease, PFAM = PF00082;PF05922)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf11604_127383-131608' '(at1g04110 : 501.0) Initially identified as a mutation affecting stomatal development and distribution. Encodes a protein similar to serine proteases.; STOMATAL DENSITY AND DISTRIBUTION (SDD1); CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT2G05920.1); Has 8825 Blast hits to 7601 proteins in 1230 species: Archae - 300; Bacteria - 5187; Metazoa - 188; Fungi - 495; Plants - 1932; Viruses - 0; Other Eukaryotes - 723 (source: NCBI BLink). & (gnl|cdd|80342 : 105.0) no description available & (reliability: 1002.0) & (original description: Putative p69f, Description = P69F protein, PFAM = PF05922;PF02225;PF00082)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf12205_217419-225802' '(at5g45650 : 850.0) subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT5G45640.1); Has 5973 Blast hits to 5550 proteins in 898 species: Archae - 128; Bacteria - 3248; Metazoa - 41; Fungi - 214; Plants - 1924; Viruses - 0; Other Eukaryotes - 418 (source: NCBI BLink). & (gnl|cdd|80342 : 127.0) no description available & (reliability: 1700.0) & (original description: Putative AIR3, Description = Subtilisin-like protease, PFAM = PF02225;PF05922;PF00082)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf12205_269061-274912' '(at5g45650 : 716.0) subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT5G45640.1); Has 5973 Blast hits to 5550 proteins in 898 species: Archae - 128; Bacteria - 3248; Metazoa - 41; Fungi - 214; Plants - 1924; Viruses - 0; Other Eukaryotes - 418 (source: NCBI BLink). & (reliability: 1432.0) & (original description: Putative AIR3, Description = Xylem serine proteinase 1, putative, PFAM = PF00082;PF05922)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf12866_24149-28353' '(at5g67360 : 508.0) Encodes a subtilisin-like serine protease essential for mucilage release from seed coats.; ARA12; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, seed coat development, mucilage metabolic process involved seed coat development, mucilage extrusion from seed coat; LOCATED IN: extracellular region, apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT2G05920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80342 : 103.0) no description available & (reliability: 1016.0) & (original description: Putative p69a, Description = Subtilisin-like serine protease, PFAM = PF02225;PF05922;PF00082)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf13361_177119-185542' '(at5g03620 : 764.0) Subtilisin-like serine endopeptidase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Peptidase S8, subtilisin-related (InterPro:IPR015500); BEST Arabidopsis thaliana protein match is: xylem serine peptidase 1 (TAIR:AT4G00230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1528.0) & (original description: Putative XSP1, Description = Cucumisin, PFAM = PF05922;PF00082)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf14814_51596-57420' '(at4g10520 : 556.0) Subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT4G10530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80342 : 97.9) no description available & (reliability: 1112.0) & (original description: Putative af70, Description = Subtilisin-like protease, PFAM = PF02225;PF00082;PF05922)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf15538_37471-42392' '(at2g19170 : 603.0) Encodes a novel subtilisin-like serine protease.; subtilisin-like serine protease 3 (SLP3); FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: middle lamella-containing extracellular matrix; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8A, DUF1034 C-terminal (InterPro:IPR010435), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: PA-domain containing subtilase family protein (TAIR:AT4G30020.1); Has 7824 Blast hits to 6803 proteins in 1147 species: Archae - 185; Bacteria - 4676; Metazoa - 73; Fungi - 358; Plants - 1850; Viruses - 0; Other Eukaryotes - 682 (source: NCBI BLink). & (reliability: 1206.0) & (original description: Putative ALE1, Description = Subtilisin-like protease, PFAM = PF00082;PF05922)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf16244_240662-249471' '(at1g20160 : 599.0) ATSBT5.2; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT1G20150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80342 : 83.6) no description available & (reliability: 1198.0) & (original description: Putative af70, Description = Subtilisin-like protein, PFAM = PF05922;PF00082)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf17612_257016-264184' '(at5g59810 : 875.0) SBT5.4; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT2G04160.1); Has 6522 Blast hits to 5856 proteins in 960 species: Archae - 194; Bacteria - 3635; Metazoa - 89; Fungi - 206; Plants - 1959; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink). & (gnl|cdd|80342 : 105.0) no description available & (reliability: 1750.0) & (original description: Putative AIR3, Description = Subtilisin-like protease, PFAM = PF05922;PF02225;PF00082)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf19660_14444-18678' '(at5g67360 : 550.0) Encodes a subtilisin-like serine protease essential for mucilage release from seed coats.; ARA12; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, seed coat development, mucilage metabolic process involved seed coat development, mucilage extrusion from seed coat; LOCATED IN: extracellular region, apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT2G05920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80342 : 120.0) no description available & (reliability: 1100.0) & (original description: Putative SbtM4, Description = Subtilase, PFAM = PF05922;PF00082;PF02225)' T '29.5.1' 'protein.degradation.subtilases' 'niben101scf28085_16543-20939' '(at3g14240 : 747.0) Subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: subtilisin-like serine protease 2 (TAIR:AT4G34980.1); Has 8878 Blast hits to 7637 proteins in 1214 species: Archae - 263; Bacteria - 5045; Metazoa - 160; Fungi - 690; Plants - 1978; Viruses - 0; Other Eukaryotes - 742 (source: NCBI BLink). & (gnl|cdd|80342 : 116.0) no description available & (reliability: 1494.0) & (original description: Putative sbt1, Description = Subtilisin-like protease, PFAM = PF05922;PF00082;PF02225)' T '29.5.2' 'protein.degradation.autophagy' 'nbv0.3scaffold2651_36654-42604' '(gnl|cdd|29162 : 183.0) no description available & (gnl|cdd|36867 : 181.0) no description available & (at4g16520 : 177.0) autophagy 8f (ATG8F); CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT3G60640.1); Has 1518 Blast hits to 1516 proteins in 273 species: Archae - 0; Bacteria - 0; Metazoa - 724; Fungi - 178; Plants - 302; Viruses - 3; Other Eukaryotes - 311 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative ATG8F, Description = Autophagy-related protein 8f, PFAM = PF02991)' T '29.5.2' 'protein.degradation.autophagy' 'nbv0.3scaffold9828_34721-41806' '(at3g59950 : 456.0) Peptidase family C54 protein; FUNCTIONS IN: peptidase activity; INVOLVED IN: autophagy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C54 (InterPro:IPR005078); BEST Arabidopsis thaliana protein match is: Peptidase family C54 protein (TAIR:AT2G44140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37885 : 367.0) no description available & (gnl|cdd|86315 : 325.0) no description available & (reliability: 912.0) & (original description: Putative ATG4, Description = Cysteine protease ATG4, PFAM = PF03416)' T '29.5.2' 'protein.degradation.autophagy' 'nbv0.3scaffold39584_6261-18351' '(at5g17290 : 209.0) Autophagy protein ATG5. Forms a conjugate with ATG12 with an essential role in plant nutrient recycling. Mutants missing ATG5 display early senescence and are hypersensitive to nitrogen or carbon starvation, accompanied by a more rapid loss of organellar and cytoplasmic proteins.; AUTOPHAGY 5 (APG5); FUNCTIONS IN: transporter activity; INVOLVED IN: autophagy, leaf senescence, response to starvation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 5 (InterPro:IPR007239); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6zgl4|atg5_orysa : 190.0) Probable autophagy protein 5 - Oryza sativa (Rice) & (gnl|cdd|38187 : 153.0) no description available & (gnl|cdd|67711 : 87.0) no description available & (reliability: 418.0) & (original description: Putative atg5, Description = Autophagy protein 5, PFAM = PF04106)' T '29.5.2' 'protein.degradation.autophagy' 'nbv0.3scaffold40383_4549-15544' '(at1g54710 : 830.0) homolog of yeast autophagy 18 (ATG18) H (ATG18H); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to starvation; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Breast carcinoma amplified sequence 3 (InterPro:IPR022175), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: homolog of yeast autophagy 18 (ATG18) G (TAIR:AT1G03380.1); Has 852 Blast hits to 850 proteins in 188 species: Archae - 0; Bacteria - 4; Metazoa - 369; Fungi - 255; Plants - 157; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|37320 : 443.0) no description available & (reliability: 1660.0) & (original description: Putative ATG18H, Description = Autophagy-related protein 18h, PFAM = PF12490)' T '29.5.2' 'protein.degradation.autophagy' 'nbv0.3scaffold61441_3297-8355' '(at3g07525 : 184.0) Encodes an E1 ligase involved in autophagic vesicle formation.; autophagy 10 (ATG10); CONTAINS InterPro DOMAIN/s: Autophagy-related protein 3 (InterPro:IPR007135); Has 420 Blast hits to 420 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 229; Fungi - 94; Plants - 56; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|39938 : 92.4) no description available & (gnl|cdd|80044 : 84.2) no description available & (reliability: 368.0) & (original description: Putative ATG10, Description = Ubiquitin-like-conjugating enzyme ATG10, PFAM = PF03987)' T '29.5.2' 'protein.degradation.autophagy' 'nbv0.3scaffold184759_1-595' '(at5g54730 : 96.7) homolog of yeast autophagy 18 (ATG18) F (G18F); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to starvation; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Breast carcinoma amplified sequence 3 (InterPro:IPR022175), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: homolog of yeast autophagy 18 (ATG18) G (TAIR:AT1G03380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative Os01g0786900, Description = Autophagy 18 F isoform 1, PFAM = )' T '29.5.2' 'protein.degradation.autophagy' 'nbv0.5scaffold457_680322-710861' '(gnl|cdd|36867 : 113.0) no description available & (gnl|cdd|79982 : 113.0) no description available & (at1g62040 : 103.0) autophagy 8c (ATG8C); FUNCTIONS IN: microtubule binding; INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G21980.2). & (reliability: 206.0) & (original description: Putative atg8, Description = Autophagy-related protein, PFAM = PF02991)' T '29.5.2' 'protein.degradation.autophagy' 'nbv0.5scaffold1961_295727-313472' '(at5g17290 : 421.0) Autophagy protein ATG5. Forms a conjugate with ATG12 with an essential role in plant nutrient recycling. Mutants missing ATG5 display early senescence and are hypersensitive to nitrogen or carbon starvation, accompanied by a more rapid loss of organellar and cytoplasmic proteins.; AUTOPHAGY 5 (APG5); FUNCTIONS IN: transporter activity; INVOLVED IN: autophagy, leaf senescence, response to starvation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 5 (InterPro:IPR007239); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6zgl4|atg5_orysa : 363.0) Probable autophagy protein 5 - Oryza sativa (Rice) & (gnl|cdd|38187 : 232.0) no description available & (gnl|cdd|67711 : 187.0) no description available & (reliability: 842.0) & (original description: Putative ATG5, Description = Autophagy protein 5, PFAM = PF04106)' T '29.5.2' 'protein.degradation.autophagy' 'nbv0.5scaffold2840_403923-410248' '(at1g54210 : 122.0) AUTOPHAGY 12 A (ATG12A); INVOLVED IN: autophagy, protein ubiquitination involved in ubiquitin-dependent protein catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 12 (InterPro:IPR007242); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT3G13970.1). & (q69np0|atg12_orysa : 113.0) Putative autophagy-related protein 12 - Oryza sativa (Rice) & (gnl|cdd|38649 : 93.5) no description available & (gnl|cdd|67715 : 89.2) no description available & (reliability: 244.0) & (original description: Putative Atg12, Description = Ubiquitin-like protein ATG12, PFAM = PF04110)' T '29.5.2' 'protein.degradation.autophagy' 'nbv0.5scaffold3597_22535-25835' '(gnl|cdd|29162 : 183.0) no description available & (gnl|cdd|36867 : 179.0) no description available & (at1g62040 : 175.0) autophagy 8c (ATG8C); FUNCTIONS IN: microtubule binding; INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G21980.2). & (reliability: 350.0) & (original description: Putative ATG8C, Description = Autophagy-related protein 8C, PFAM = PF02991)' T '29.5.2' 'protein.degradation.autophagy' 'nbv0.5scaffold4545_54644-59796' '(at1g54710 : 712.0) homolog of yeast autophagy 18 (ATG18) H (ATG18H); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to starvation; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Breast carcinoma amplified sequence 3 (InterPro:IPR022175), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: homolog of yeast autophagy 18 (ATG18) G (TAIR:AT1G03380.1); Has 852 Blast hits to 850 proteins in 188 species: Archae - 0; Bacteria - 4; Metazoa - 369; Fungi - 255; Plants - 157; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|37320 : 378.0) no description available & (reliability: 1424.0) & (original description: Putative ATG18G, Description = AtATG18g, PFAM = PF12490)' T '29.5.2' 'protein.degradation.autophagy' 'niben044scf00001756ctg007_5007-16580' '(at5g61500 : 486.0) ATG3; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 3 (InterPro:IPR007135), Autophagy-related protein 3, C-terminal (InterPro:IPR019461), Autophagy-related protein 3, N-terminal (InterPro:IPR007134); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38192 : 381.0) no description available & (gnl|cdd|80044 : 192.0) no description available & (reliability: 972.0) & (original description: Putative atg3, Description = Autophagy-related protein 3, PFAM = PF03986;PF10381;PF03987)' T '29.5.2' 'protein.degradation.autophagy' 'niben044scf00003316ctg007_2470-7097' '(gnl|cdd|29162 : 191.0) no description available & (at1g62040 : 189.0) autophagy 8c (ATG8C); FUNCTIONS IN: microtubule binding; INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G21980.2). & (gnl|cdd|36867 : 188.0) no description available & (reliability: 378.0) & (original description: Putative ATG8C, Description = Autophagy-related protein 8C, PFAM = PF02991)' T '29.5.2' 'protein.degradation.autophagy' 'niben044scf00012195ctg008_2650-11141' '(at5g61500 : 520.0) ATG3; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 3 (InterPro:IPR007135), Autophagy-related protein 3, C-terminal (InterPro:IPR019461), Autophagy-related protein 3, N-terminal (InterPro:IPR007134); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38192 : 377.0) no description available & (gnl|cdd|80044 : 186.0) no description available & (reliability: 1040.0) & (original description: Putative ATG3, Description = Autophagy-related protein 3, PFAM = PF03987;PF03986;PF10381)' T '29.5.2' 'protein.degradation.autophagy' 'niben044scf00013378ctg023_2699-7895' '(at1g54710 : 716.0) homolog of yeast autophagy 18 (ATG18) H (ATG18H); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to starvation; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Breast carcinoma amplified sequence 3 (InterPro:IPR022175), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: homolog of yeast autophagy 18 (ATG18) G (TAIR:AT1G03380.1); Has 852 Blast hits to 850 proteins in 188 species: Archae - 0; Bacteria - 4; Metazoa - 369; Fungi - 255; Plants - 157; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|37320 : 371.0) no description available & (reliability: 1432.0) & (original description: Putative ATG18G, Description = AtATG18g, PFAM = PF00400;PF12490)' T '29.5.2' 'protein.degradation.autophagy' 'niben044scf00015425ctg023_3566-6862' '(at1g62040 : 192.0) autophagy 8c (ATG8C); FUNCTIONS IN: microtubule binding; INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G21980.2). & (gnl|cdd|29162 : 184.0) no description available & (gnl|cdd|36867 : 180.0) no description available & (reliability: 384.0) & (original description: Putative apg8, Description = Autophagy-related protein, PFAM = PF02991)' T '29.5.2' 'protein.degradation.autophagy' 'niben044scf00027144ctg001_1-4914' '(at5g17290 : 169.0) Autophagy protein ATG5. Forms a conjugate with ATG12 with an essential role in plant nutrient recycling. Mutants missing ATG5 display early senescence and are hypersensitive to nitrogen or carbon starvation, accompanied by a more rapid loss of organellar and cytoplasmic proteins.; AUTOPHAGY 5 (APG5); FUNCTIONS IN: transporter activity; INVOLVED IN: autophagy, leaf senescence, response to starvation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 5 (InterPro:IPR007239); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6zgl4|atg5_orysa : 136.0) Probable autophagy protein 5 - Oryza sativa (Rice) & (gnl|cdd|67711 : 93.9) no description available & (reliability: 338.0) & (original description: Putative APG5, Description = Autophagy protein 5, PFAM = PF04106)' T '29.5.2' 'protein.degradation.autophagy' 'niben044scf00044895ctg000_44454-51856' '(at2g44140 : 461.0) Peptidase family C54 protein; CONTAINS InterPro DOMAIN/s: Peptidase C54 (InterPro:IPR005078); BEST Arabidopsis thaliana protein match is: Peptidase family C54 protein (TAIR:AT3G59950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37885 : 380.0) no description available & (gnl|cdd|86315 : 343.0) no description available & (reliability: 922.0) & (original description: Putative ATG4, Description = Cysteine protease ATG4, PFAM = PF03416)' T '29.5.2' 'protein.degradation.autophagy' 'niben101scf00051_498957-504937' '(gnl|cdd|36867 : 186.0) no description available & (gnl|cdd|29162 : 185.0) no description available & (at1g62040 : 184.0) autophagy 8c (ATG8C); FUNCTIONS IN: microtubule binding; INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G21980.2). & (reliability: 368.0) & (original description: Putative ATG8C, Description = Autophagy-related protein 8C, PFAM = PF02991)' T '29.5.2' 'protein.degradation.autophagy' 'niben101scf00114_95520-102408' '(at2g31260 : 1014.0) Involved in autophagy, the process of vacuolar bulk degradation of cytoplasmic components. Mutant shows accelerated bolting and senescence.; autophagy 9 (APG9); CONTAINS InterPro DOMAIN/s: Autophagy-related protein 9 (InterPro:IPR007241); Has 489 Blast hits to 477 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 214; Fungi - 166; Plants - 51; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|37384 : 653.0) no description available & (gnl|cdd|86546 : 482.0) no description available & (reliability: 2028.0) & (original description: Putative ATG9, Description = Autophagy-related protein 9, PFAM = PF04109)' T '29.5.2' 'protein.degradation.autophagy' 'niben101scf00860_125319-132718' '(at3g56440 : 619.0) homolog of yeast autophagy 18 (ATG18) D (ATG18D); CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: homolog of yeast autophagy 18C (TAIR:AT2G40810.2); Has 1451 Blast hits to 1383 proteins in 243 species: Archae - 0; Bacteria - 34; Metazoa - 579; Fungi - 434; Plants - 212; Viruses - 2; Other Eukaryotes - 190 (source: NCBI BLink). & (gnl|cdd|37322 : 476.0) no description available & (reliability: 1238.0) & (original description: Putative ATG18D, Description = Autophagy-related protein 18d, PFAM = PF00400)' T '29.5.2' 'protein.degradation.autophagy' 'niben101scf01204_116712-132173' '(at5g61500 : 520.0) ATG3; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 3 (InterPro:IPR007135), Autophagy-related protein 3, C-terminal (InterPro:IPR019461), Autophagy-related protein 3, N-terminal (InterPro:IPR007134); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38192 : 377.0) no description available & (gnl|cdd|80044 : 185.0) no description available & (reliability: 1040.0) & (original description: Putative ATG3, Description = Autophagy-related protein 3, PFAM = PF10381;PF03986;PF03987)' T '29.5.2' 'protein.degradation.autophagy' 'niben101scf01320_332715-351523' '(at5g17290 : 374.0) Autophagy protein ATG5. Forms a conjugate with ATG12 with an essential role in plant nutrient recycling. Mutants missing ATG5 display early senescence and are hypersensitive to nitrogen or carbon starvation, accompanied by a more rapid loss of organellar and cytoplasmic proteins.; AUTOPHAGY 5 (APG5); FUNCTIONS IN: transporter activity; INVOLVED IN: autophagy, leaf senescence, response to starvation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 5 (InterPro:IPR007239); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6zgl4|atg5_orysa : 326.0) Probable autophagy protein 5 - Oryza sativa (Rice) & (gnl|cdd|38187 : 220.0) no description available & (gnl|cdd|67711 : 175.0) no description available & (reliability: 748.0) & (original description: Putative ATG5, Description = Autophagy protein 5, PFAM = PF04106)' T '29.5.2' 'protein.degradation.autophagy' 'niben101scf01626_128019-139882' '(at1g54710 : 829.0) homolog of yeast autophagy 18 (ATG18) H (ATG18H); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to starvation; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Breast carcinoma amplified sequence 3 (InterPro:IPR022175), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: homolog of yeast autophagy 18 (ATG18) G (TAIR:AT1G03380.1); Has 852 Blast hits to 850 proteins in 188 species: Archae - 0; Bacteria - 4; Metazoa - 369; Fungi - 255; Plants - 157; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|37320 : 440.0) no description available & (reliability: 1658.0) & (original description: Putative ATG18G, Description = AtATG18g, PFAM = PF12490)' T '29.5.2' 'protein.degradation.autophagy' 'niben101scf01773_312419-318428' '(at3g15580 : 180.0) Encodes APG8, a component of autophagy conjugation pathway. Delivered to the lumens of vacuole under nitrogen-starvation condition.; AUTOPHAGY 8H (APG8H); CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT3G06420.1); Has 1501 Blast hits to 1499 proteins in 273 species: Archae - 0; Bacteria - 0; Metazoa - 719; Fungi - 178; Plants - 302; Viruses - 3; Other Eukaryotes - 299 (source: NCBI BLink). & (gnl|cdd|29162 : 164.0) no description available & (gnl|cdd|36867 : 160.0) no description available & (reliability: 360.0) & (original description: Putative ATG8I, Description = Autophagy-related protein 8i, PFAM = PF02991)' T '29.5.2' 'protein.degradation.autophagy' 'niben101scf02093_499689-505241' '(at3g07525 : 185.0) Encodes an E1 ligase involved in autophagic vesicle formation.; autophagy 10 (ATG10); CONTAINS InterPro DOMAIN/s: Autophagy-related protein 3 (InterPro:IPR007135); Has 420 Blast hits to 420 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 229; Fungi - 94; Plants - 56; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|39938 : 92.8) no description available & (gnl|cdd|80044 : 85.7) no description available & (reliability: 370.0) & (original description: Putative ATG10, Description = Ubiquitin-like-conjugating enzyme ATG10, PFAM = PF03987)' T '29.5.2' 'protein.degradation.autophagy' 'niben101scf02433_173357-188730' '(at5g17290 : 197.0) Autophagy protein ATG5. Forms a conjugate with ATG12 with an essential role in plant nutrient recycling. Mutants missing ATG5 display early senescence and are hypersensitive to nitrogen or carbon starvation, accompanied by a more rapid loss of organellar and cytoplasmic proteins.; AUTOPHAGY 5 (APG5); FUNCTIONS IN: transporter activity; INVOLVED IN: autophagy, leaf senescence, response to starvation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 5 (InterPro:IPR007239); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6zgl4|atg5_orysa : 180.0) Probable autophagy protein 5 - Oryza sativa (Rice) & (gnl|cdd|38187 : 152.0) no description available & (gnl|cdd|67711 : 87.7) no description available & (reliability: 394.0) & (original description: Putative atg5, Description = Autophagy protein 5, PFAM = PF04106)' T '29.5.2' 'protein.degradation.autophagy' 'niben101scf03374_114573-121695' '(at4g16520 : 204.0) autophagy 8f (ATG8F); CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT3G60640.1); Has 1518 Blast hits to 1516 proteins in 273 species: Archae - 0; Bacteria - 0; Metazoa - 724; Fungi - 178; Plants - 302; Viruses - 3; Other Eukaryotes - 311 (source: NCBI BLink). & (gnl|cdd|29162 : 186.0) no description available & (gnl|cdd|36867 : 184.0) no description available & (reliability: 408.0) & (original description: Putative ATG8F, Description = Autophagy-related protein 8f, PFAM = PF02991)' T '29.5.2' 'protein.degradation.autophagy' 'niben101scf03644_280476-290597' '(at5g61500 : 526.0) ATG3; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 3 (InterPro:IPR007135), Autophagy-related protein 3, C-terminal (InterPro:IPR019461), Autophagy-related protein 3, N-terminal (InterPro:IPR007134); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38192 : 385.0) no description available & (gnl|cdd|80044 : 193.0) no description available & (reliability: 1052.0) & (original description: Putative ATG3, Description = Autophagy-related protein 3, PFAM = PF10381;PF03986;PF03987)' T '29.5.2' 'protein.degradation.autophagy' 'niben101scf04339_959907-966862' '(at2g05630 : 127.0) in the Arabidopsis autophagy pathway; ATG8D; FUNCTIONS IN: microtubule binding; INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT1G62040.2); Has 1504 Blast hits to 1502 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 717; Fungi - 172; Plants - 303; Viruses - 3; Other Eukaryotes - 309 (source: NCBI BLink). & (gnl|cdd|29162 : 117.0) no description available & (gnl|cdd|36867 : 114.0) no description available & (reliability: 252.0) & (original description: Putative apg8, Description = Autophagy-related protein, PFAM = PF02991;PF02991)' T '29.5.2' 'protein.degradation.autophagy' 'niben101scf04446_77426-83555' '(at1g62040 : 209.0) autophagy 8c (ATG8C); FUNCTIONS IN: microtubule binding; INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G21980.2). & (gnl|cdd|36867 : 186.0) no description available & (gnl|cdd|29162 : 185.0) no description available & (reliability: 418.0) & (original description: Putative ATG8D, Description = Autophagy-related protein 8d, PFAM = PF02991)' T '29.5.2' 'protein.degradation.autophagy' 'niben101scf04446_77465-107646' '(at1g62040 : 119.0) autophagy 8c (ATG8C); FUNCTIONS IN: microtubule binding; INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G21980.2). & (gnl|cdd|79982 : 111.0) no description available & (gnl|cdd|36867 : 110.0) no description available & (reliability: 238.0) & (original description: Putative atg8, Description = Autophagy-related protein, PFAM = PF02991)' T '29.5.2' 'protein.degradation.autophagy' 'niben101scf06836_167447-171834' '(at1g62040 : 209.0) autophagy 8c (ATG8C); FUNCTIONS IN: microtubule binding; INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G21980.2). & (gnl|cdd|29162 : 190.0) no description available & (gnl|cdd|36867 : 188.0) no description available & (reliability: 418.0) & (original description: Putative ATG8C, Description = Autophagy-related protein 8C, PFAM = PF02991)' T '29.5.2' 'protein.degradation.autophagy' 'niben101scf06879_113316-119327' '(at5g45900 : 929.0) Component of autophagy conjugation pathway. Required for proper senescence.; AUTOPHAGY 7 (APG7); FUNCTIONS IN: APG8 activating enzyme activity; INVOLVED IN: autophagy, protein amino acid lipidation, leaf senescence, aging; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: E1-like protein-activating enzyme Gsa7p/Apg7p (InterPro:IPR006285), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37548 : 809.0) no description available & (gnl|cdd|30115 : 465.0) no description available & (reliability: 1858.0) & (original description: Putative ATG7, Description = Ubiquitin-like modifier-activating enzyme atg7, PFAM = PF00899;PF16420)' T '29.5.2' 'protein.degradation.autophagy' 'niben101scf07182_375289-382374' '(at3g59950 : 466.0) Peptidase family C54 protein; FUNCTIONS IN: peptidase activity; INVOLVED IN: autophagy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C54 (InterPro:IPR005078); BEST Arabidopsis thaliana protein match is: Peptidase family C54 protein (TAIR:AT2G44140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37885 : 380.0) no description available & (gnl|cdd|86315 : 339.0) no description available & (reliability: 932.0) & (original description: Putative ATG4, Description = Cysteine protease ATG4, PFAM = PF03416)' T '29.5.2' 'protein.degradation.autophagy' 'niben101scf08640_12954-17562' '(gnl|cdd|29162 : 181.0) no description available & (gnl|cdd|36867 : 178.0) no description available & (at4g16520 : 175.0) autophagy 8f (ATG8F); CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT3G60640.1); Has 1518 Blast hits to 1516 proteins in 273 species: Archae - 0; Bacteria - 0; Metazoa - 724; Fungi - 178; Plants - 302; Viruses - 3; Other Eukaryotes - 311 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative ATG8F, Description = Autophagy-related protein 8f, PFAM = PF02991)' T '29.5.2' 'protein.degradation.autophagy' 'niben101scf08991_263297-267903' '(gnl|cdd|29162 : 191.0) no description available & (at1g62040 : 189.0) autophagy 8c (ATG8C); FUNCTIONS IN: microtubule binding; INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G21980.2). & (gnl|cdd|36867 : 189.0) no description available & (reliability: 378.0) & (original description: Putative ATG8C, Description = Autophagy-related protein 8C, PFAM = PF02991)' T '29.5.2' 'protein.degradation.autophagy' 'niben101scf09343_147280-176270' '(at5g54730 : 463.0) homolog of yeast autophagy 18 (ATG18) F (G18F); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to starvation; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Breast carcinoma amplified sequence 3 (InterPro:IPR022175), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: homolog of yeast autophagy 18 (ATG18) G (TAIR:AT1G03380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37320 : 281.0) no description available & (reliability: 926.0) & (original description: Putative ATG18F, Description = Autophagy-related protein 18f, PFAM = PF12490)' T '29.5.2' 'protein.degradation.autophagy' 'niben101scf13308_20627-32570' '(at3g61710 : 701.0) Encodes autophagy protein 6 (ATG6), required for pollen germination and plant development.; BECLIN1 (BECLIN1); CONTAINS InterPro DOMAIN/s: Autophagy-related protein 6 (InterPro:IPR007243); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37962 : 414.0) no description available & (gnl|cdd|67716 : 364.0) no description available & (reliability: 1402.0) & (original description: Putative atg6, Description = Beclin 1 protein, PFAM = PF04111)' T '29.5.2' 'protein.degradation.autophagy' 'niben101scf13644_100044-110498' '(at5g54730 : 481.0) homolog of yeast autophagy 18 (ATG18) F (G18F); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to starvation; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Breast carcinoma amplified sequence 3 (InterPro:IPR022175), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: homolog of yeast autophagy 18 (ATG18) G (TAIR:AT1G03380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37320 : 283.0) no description available & (reliability: 962.0) & (original description: Putative ATG18F, Description = Autophagy-related protein 18f, PFAM = PF12490)' T '29.5.2' 'protein.degradation.autophagy' 'niben101scf14587_83125-98607' '(at5g61500 : 520.0) ATG3; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 3 (InterPro:IPR007135), Autophagy-related protein 3, C-terminal (InterPro:IPR019461), Autophagy-related protein 3, N-terminal (InterPro:IPR007134); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38192 : 386.0) no description available & (gnl|cdd|80044 : 190.0) no description available & (reliability: 1040.0) & (original description: Putative ATG3, Description = Autophagy-related protein 3, PFAM = PF03986;PF03987;PF10381)' T '29.5.2' 'protein.degradation.autophagy' 'niben101scf15156_180183-193221' '(at1g54710 : 828.0) homolog of yeast autophagy 18 (ATG18) H (ATG18H); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to starvation; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Breast carcinoma amplified sequence 3 (InterPro:IPR022175), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: homolog of yeast autophagy 18 (ATG18) G (TAIR:AT1G03380.1); Has 852 Blast hits to 850 proteins in 188 species: Archae - 0; Bacteria - 4; Metazoa - 369; Fungi - 255; Plants - 157; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|37320 : 434.0) no description available & (reliability: 1656.0) & (original description: Putative ATG18H, Description = Autophagy-related protein 18h, PFAM = PF12490)' T '29.5.3' 'protein.degradation.cysteine protease' 'nbv0.3scaffold2003_65603-69542' '(p25803|cysep_phavu : 503.0) Vignain precursor (EC 3.4.22.-) (Bean endopeptidase) (Cysteine proteinase EP-C1) - Phaseolus vulgaris (Kidney bean) (French bean) & (at5g50260 : 475.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT3G48340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84529 : 301.0) no description available & (gnl|cdd|36756 : 275.0) no description available & (reliability: 950.0) & (original description: Putative scp3, Description = Cysteine protease-3, PFAM = PF00112;PF08246)' T '29.5.3' 'protein.degradation.cysteine protease' 'nbv0.3scaffold14662_10132-13213' '(at5g45890 : 382.0) Senescence-associated gene 12 (SAG12) encoding a cysteine protease influenced by cytokinin, auxin, and sugars.Localized to special vacuole found during senescence called senescence associated vacuoles which are different from central vacuole in the tonoplast composition and pH.; senescence-associated gene 12 (SAG12); CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT3G49340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o65039|cysep_ricco : 370.0) Vignain precursor (EC 3.4.22.-) (Cysteine endopeptidase) - Ricinus communis (Castor bean) & (gnl|cdd|84529 : 296.0) no description available & (gnl|cdd|36756 : 293.0) no description available & (reliability: 764.0) & (original description: Putative cp8, Description = Putative cysteine protease 8, PFAM = PF08246;PF00112)' T '29.5.3' 'protein.degradation.cysteine protease' 'nbv0.3scaffold22945_1-28799' '(at1g55350 : 2189.0) Similar to maize DEK1, a gene encoding a membrane protein of the calpain gene superfamily required for aleurone cell development in the endosperm of maize grains. A key component of the embryonic L1 cell-layer specification pathway.; DEFECTIVE KERNEL 1 (DEK1); FUNCTIONS IN: cysteine-type endopeptidase activity, calcium-dependent cysteine-type endopeptidase activity; INVOLVED IN: cell fate specification, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C2, calpain, domain III (InterPro:IPR022683), Peptidase C2, calpain, large subunit, domain III (InterPro:IPR022682), Peptidase, cysteine peptidase active site (InterPro:IPR000169), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Peptidase C2, calpain, catalytic domain (InterPro:IPR001300), Peptidase C2, calpain family (InterPro:IPR022684). & (gnl|cdd|35268 : 107.0) no description available & (reliability: 4378.0) & (original description: Putative BnaC06g07270D, Description = BnaC06g07270D protein, PFAM = )' T '29.5.3' 'protein.degradation.cysteine protease' 'nbv0.3scaffold34496_37348-42358' '(at3g12490 : 160.0) Encodes a protein with cysteine proteinase inhibitor activity. Overexpression increases tolerance to abiotic stressors (i.e.salt,osmitic, cold stress).; cystatin B (CYSB); FUNCTIONS IN: cysteine-type endopeptidase inhibitor activity, cobalt ion binding; INVOLVED IN: response to abiotic stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I25, cystatin, conserved site (InterPro:IPR018073), Proteinase inhibitor I25, cystatin, conserved region (InterPro:IPR020381), Proteinase inhibitor I25, cystatin (InterPro:IPR000010); BEST Arabidopsis thaliana protein match is: Cystatin/monellin family protein (TAIR:AT5G05110.1); Has 755 Blast hits to 732 proteins in 99 species: Archae - 0; Bacteria - 2; Metazoa - 28; Fungi - 0; Plants - 721; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (q06445|cyti_vigun : 128.0) Cysteine proteinase inhibitor (Cystatin) - Vigna unguiculata (Cowpea) & (reliability: 320.0) & (original description: Putative ci1, Description = Cysteine proteinase inhibitor, PFAM = PF16845)' T '29.5.3' 'protein.degradation.cysteine protease' 'nbv0.3scaffold35036_1-3751' '(at2g27350 : 274.0) OTU-like cysteine protease family protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: SEC-C motif-containing protein / OTU-like cysteine protease family protein (TAIR:AT5G67170.2). & (reliability: 548.0) & (original description: Putative 6817, Description = OTUlike cysteine protease, PFAM = PF02338)' T '29.5.3' 'protein.degradation.cysteine protease' 'nbv0.3scaffold35184_1-3163' '(at5g45890 : 408.0) Senescence-associated gene 12 (SAG12) encoding a cysteine protease influenced by cytokinin, auxin, and sugars.Localized to special vacuole found during senescence called senescence associated vacuoles which are different from central vacuole in the tonoplast composition and pH.; senescence-associated gene 12 (SAG12); CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT3G49340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p25803|cysep_phavu : 359.0) Vignain precursor (EC 3.4.22.-) (Bean endopeptidase) (Cysteine proteinase EP-C1) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|84529 : 283.0) no description available & (gnl|cdd|36756 : 279.0) no description available & (reliability: 816.0) & (original description: Putative cp8, Description = Putative cysteine protease 8, PFAM = PF00112;PF08246)' T '29.5.3' 'protein.degradation.cysteine protease' 'nbv0.3scaffold36020_6925-11438' '(at4g15880 : 228.0) EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease, located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering. Probably acts in the same pathway as NUA in affecting flowering time, vegetative and inflorescence development.; EARLY IN SHORT DAYS 4 (ESD4); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: UB-like protease 1A (TAIR:AT3G06910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35997 : 198.0) no description available & (gnl|cdd|34761 : 115.0) no description available & (reliability: 456.0) & (original description: Putative BnaC08g40170D, Description = BnaC08g40170D protein, PFAM = PF02902)' T '29.5.3' 'protein.degradation.cysteine protease' 'nbv0.3scaffold39155_7676-18252' '(at5g04250 : 350.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT5G03330.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37816 : 205.0) no description available & (gnl|cdd|85961 : 91.4) no description available & (reliability: 700.0) & (original description: Putative OTU9, Description = OTU-like cysteine protease family protein, putative, expressed, PFAM = PF02338)' T '29.5.3' 'protein.degradation.cysteine protease' 'nbv0.3scaffold54389_11149-13647' '(at2g27420 : 298.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity, cysteine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT3G49340.1); Has 7920 Blast hits to 7848 proteins in 742 species: Archae - 67; Bacteria - 274; Metazoa - 3329; Fungi - 4; Plants - 1897; Viruses - 138; Other Eukaryotes - 2211 (source: NCBI BLink). & (p25250|cysp2_horvu : 275.0) Cysteine proteinase EP-B 2 precursor (EC 3.4.22.-) - Hordeum vulgare (Barley) & (gnl|cdd|36756 : 265.0) no description available & (gnl|cdd|47922 : 243.0) no description available & (reliability: 596.0) & (original description: Putative pip1, Description = Phytophthora-inhibited protease 1, PFAM = PF08246;PF00112)' T '29.5.3' 'protein.degradation.cysteine protease' 'nbv0.3scaffold56385_12-4186' '(at1g09850 : 380.0) Arabidopsis thaliana papain-like cysteine peptidase; xylem bark cysteine peptidase 3 (XBCP3); FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Granulin (InterPro:IPR000118), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT5G43060.1); Has 8836 Blast hits to 8016 proteins in 749 species: Archae - 59; Bacteria - 272; Metazoa - 4224; Fungi - 4; Plants - 1933; Viruses - 132; Other Eukaryotes - 2212 (source: NCBI BLink). & (p25776|orya_orysa : 357.0) Oryzain alpha chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) & (gnl|cdd|36755 : 282.0) no description available & (gnl|cdd|30292 : 275.0) no description available & (reliability: 760.0) & (original description: Putative ctp, Description = Thiol protease, PFAM = PF00396;PF08246;PF00112)' T '29.5.3' 'protein.degradation.cysteine protease' 'nbv0.3scaffold63618_16643-19852' '(at2g27350 : 115.0) OTU-like cysteine protease family protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: SEC-C motif-containing protein / OTU-like cysteine protease family protein (TAIR:AT5G67170.2). & (reliability: 230.0) & (original description: Putative OTU6, Description = Ovarian tumor, otubain, PFAM = )' T '29.5.3' 'protein.degradation.cysteine protease' 'nbv0.5scaffold484_579720-608814' '(at1g09730 : 384.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT4G33620.1). & (gnl|cdd|34761 : 138.0) no description available & (gnl|cdd|35997 : 115.0) no description available & (reliability: 768.0) & (original description: Putative ULP2A, Description = Putative ubiquitin-like-specific protease 2B, PFAM = PF02902)' T '29.5.3' 'protein.degradation.cysteine protease' 'nbv0.5scaffold3257_99064-139571' '(at1g09730 : 358.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT4G33620.1). & (gnl|cdd|34761 : 130.0) no description available & (gnl|cdd|35998 : 113.0) no description available & (reliability: 716.0) & (original description: Putative ULP2B, Description = Putative ubiquitin-like-specific protease 2B, PFAM = PF02902)' T '29.5.3' 'protein.degradation.cysteine protease' 'nbv0.5scaffold4049_7074-13187' '(at1g09850 : 526.0) Arabidopsis thaliana papain-like cysteine peptidase; xylem bark cysteine peptidase 3 (XBCP3); FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Granulin (InterPro:IPR000118), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT5G43060.1); Has 8836 Blast hits to 8016 proteins in 749 species: Archae - 59; Bacteria - 272; Metazoa - 4224; Fungi - 4; Plants - 1933; Viruses - 132; Other Eukaryotes - 2212 (source: NCBI BLink). & (p25776|orya_orysa : 370.0) Oryzain alpha chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) & (gnl|cdd|36756 : 279.0) no description available & (gnl|cdd|84529 : 275.0) no description available & (reliability: 1052.0) & (original description: Putative XBCP3, Description = At1g09850, PFAM = PF08246;PF00112;PF00396)' T '29.5.3' 'protein.degradation.cysteine protease' 'nbv0.5scaffold4254_47182-58274' '(at5g04250 : 353.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT5G03330.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37816 : 204.0) no description available & (gnl|cdd|85961 : 91.0) no description available & (reliability: 706.0) & (original description: Putative OTU9, Description = At5g04250, PFAM = PF02338)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben044scf00000844ctg039_267-3425' '(at1g09850 : 305.0) Arabidopsis thaliana papain-like cysteine peptidase; xylem bark cysteine peptidase 3 (XBCP3); FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Granulin (InterPro:IPR000118), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT5G43060.1); Has 8836 Blast hits to 8016 proteins in 749 species: Archae - 59; Bacteria - 272; Metazoa - 4224; Fungi - 4; Plants - 1933; Viruses - 132; Other Eukaryotes - 2212 (source: NCBI BLink). & (p22895|p34_soybn : 286.0) P34 probable thiol protease precursor (EC 3.4.22.-) - Glycine max (Soybean) & (gnl|cdd|30292 : 267.0) no description available & (gnl|cdd|36755 : 264.0) no description available & (reliability: 610.0) & (original description: Putative cp1, Description = Cysteine proteinase, PFAM = PF00112;PF08246)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben044scf00002365ctg019_4926-9632' '(at4g35350 : 535.0) tracheary element vacuolar protein; xylem cysteine peptidase 1 (XCP1); FUNCTIONS IN: cysteine-type peptidase activity, cysteine-type endopeptidase activity; INVOLVED IN: proteolysis, developmental programmed cell death; LOCATED IN: plant-type vacuole; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: xylem cysteine peptidase 2 (TAIR:AT1G20850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p25776|orya_orysa : 372.0) Oryzain alpha chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) & (gnl|cdd|84529 : 299.0) no description available & (gnl|cdd|36755 : 290.0) no description available & (reliability: 1070.0) & (original description: Putative scp4, Description = Cysteine protease-4, PFAM = PF08246;PF00112)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben044scf00008400ctg006_1679-6155' '(at4g15880 : 254.0) EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease, located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering. Probably acts in the same pathway as NUA in affecting flowering time, vegetative and inflorescence development.; EARLY IN SHORT DAYS 4 (ESD4); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: UB-like protease 1A (TAIR:AT3G06910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35997 : 194.0) no description available & (gnl|cdd|34761 : 112.0) no description available & (reliability: 508.0) & (original description: Putative BnaC08g40170D, Description = BnaC08g40170D protein, PFAM = PF02902)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben044scf00008651ctg006_2643-22202' '(at1g55350 : 2326.0) Similar to maize DEK1, a gene encoding a membrane protein of the calpain gene superfamily required for aleurone cell development in the endosperm of maize grains. A key component of the embryonic L1 cell-layer specification pathway.; DEFECTIVE KERNEL 1 (DEK1); FUNCTIONS IN: cysteine-type endopeptidase activity, calcium-dependent cysteine-type endopeptidase activity; INVOLVED IN: cell fate specification, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C2, calpain, domain III (InterPro:IPR022683), Peptidase C2, calpain, large subunit, domain III (InterPro:IPR022682), Peptidase, cysteine peptidase active site (InterPro:IPR000169), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Peptidase C2, calpain, catalytic domain (InterPro:IPR001300), Peptidase C2, calpain family (InterPro:IPR022684). & (gnl|cdd|28925 : 297.0) no description available & (gnl|cdd|35268 : 231.0) no description available & (reliability: 4652.0) & (original description: Putative DEK1, Description = Calpain-type cysteine protease DEK1, PFAM = PF00648)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben044scf00008651ctg007_993-4345' '(at1g55350 : 363.0) Similar to maize DEK1, a gene encoding a membrane protein of the calpain gene superfamily required for aleurone cell development in the endosperm of maize grains. A key component of the embryonic L1 cell-layer specification pathway.; DEFECTIVE KERNEL 1 (DEK1); FUNCTIONS IN: cysteine-type endopeptidase activity, calcium-dependent cysteine-type endopeptidase activity; INVOLVED IN: cell fate specification, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C2, calpain, domain III (InterPro:IPR022683), Peptidase C2, calpain, large subunit, domain III (InterPro:IPR022682), Peptidase, cysteine peptidase active site (InterPro:IPR000169), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Peptidase C2, calpain, catalytic domain (InterPro:IPR001300), Peptidase C2, calpain family (InterPro:IPR022684). & (gnl|cdd|29269 : 118.0) no description available & (gnl|cdd|35268 : 92.0) no description available & (reliability: 726.0) & (original description: Putative ADL1, Description = Protein DEFECTIVE KERNEL 1, PFAM = PF01067)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben044scf00011387ctg024_3608-9867' '(at4g15880 : 279.0) EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease, located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering. Probably acts in the same pathway as NUA in affecting flowering time, vegetative and inflorescence development.; EARLY IN SHORT DAYS 4 (ESD4); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: UB-like protease 1A (TAIR:AT3G06910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35997 : 227.0) no description available & (gnl|cdd|34761 : 125.0) no description available & (reliability: 558.0) & (original description: Putative ESD4, Description = Ubiquitin-like-specific protease ESD4, PFAM = PF02902)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben044scf00013296ctg001_881-8851' '(at1g50670 : 349.0) OTU-like cysteine protease family protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); Has 406 Blast hits to 406 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 136; Plants - 63; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|38498 : 285.0) no description available & (gnl|cdd|35098 : 104.0) no description available & (reliability: 698.0) & (original description: Putative YOD1, Description = Ubiquitin thioesterase OTU1, PFAM = )' T '29.5.3' 'protein.degradation.cysteine protease' 'niben044scf00014627ctg002_40163-45181' '(at4g39090 : 553.0) Similar to cysteine proteinases, induced by desiccation but not abscisic acid. Required for RRS1-R mediated resistance against Ralstonia solanacearum. Interacts with the R. solanacearum type III effector PopP2. RD19 associates with PopP2 to form a nuclear complex that is required for activation of the RRS1-Rñmediated resistance response.; RESPONSIVE TO DEHYDRATION 19 (RD19); CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Papain family cysteine protease (TAIR:AT2G21430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p25804|cysp_pea : 501.0) Cysteine proteinase 15A precursor (EC 3.4.22.-) (Turgor-responsive protein 15A) - Pisum sativum (Garden pea) & (gnl|cdd|36755 : 469.0) no description available & (gnl|cdd|84529 : 286.0) no description available & (reliability: 1106.0) & (original description: Putative paC1, Description = Putative papain-like cysteine proteinase, PFAM = PF08246;PF00112)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben044scf00017685ctg008_1099-5305' '(at3g57810 : 197.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT2G38025.1); Has 624 Blast hits to 624 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 265; Fungi - 54; Plants - 235; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|37817 : 123.0) no description available & (gnl|cdd|85961 : 84.1) no description available & (reliability: 394.0) & (original description: Putative KK1_040379, Description = OTU domain-containing protein 6B, PFAM = PF02338)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben044scf00019173ctg000_1-3506' '(at5g43060 : 429.0) Granulin repeat cysteine protease family protein; FUNCTIONS IN: cysteine-type peptidase activity, cysteine-type endopeptidase activity; INVOLVED IN: response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Granulin (InterPro:IPR000118), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT1G47128.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p25776|orya_orysa : 400.0) Oryzain alpha chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) & (gnl|cdd|84529 : 260.0) no description available & (gnl|cdd|36756 : 254.0) no description available & (reliability: 858.0) & (original description: Putative rd21, Description = Daikon cysteine protease RD21, PFAM = PF08246;PF00112)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben044scf00027887ctg005_14505-21125' '(at5g04250 : 267.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT5G03330.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37816 : 185.0) no description available & (gnl|cdd|85961 : 92.2) no description available & (reliability: 534.0) & (original description: Putative OTU9, Description = At5g04250, PFAM = PF02338)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben044scf00035145ctg000_1-4937' '(at1g02305 : 490.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis, regulation of catalytic activity; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Peptidase C1A, cathepsin B (InterPro:IPR015643), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169), Peptidase C1A, propeptide (InterPro:IPR012599); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G02300.1); Has 7484 Blast hits to 7435 proteins in 695 species: Archae - 51; Bacteria - 161; Metazoa - 3268; Fungi - 4; Plants - 1732; Viruses - 146; Other Eukaryotes - 2122 (source: NCBI BLink). & (gnl|cdd|30294 : 345.0) no description available & (gnl|cdd|36756 : 219.0) no description available & (p05167|aleu_horvu : 98.6) Thiol protease aleurain precursor (EC 3.4.22.16) - Hordeum vulgare (Barley) & (reliability: 980.0) & (original description: Putative CTSB, Description = Cathepsin B, PFAM = PF00112;PF08127)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben044scf00038003ctg000_1019-8345' '(at4g15880 : 435.0) EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease, located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering. Probably acts in the same pathway as NUA in affecting flowering time, vegetative and inflorescence development.; EARLY IN SHORT DAYS 4 (ESD4); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: UB-like protease 1A (TAIR:AT3G06910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35997 : 298.0) no description available & (gnl|cdd|34761 : 154.0) no description available & (reliability: 870.0) & (original description: Putative ESD4, Description = Ubiquitin-like-specific protease ESD4, PFAM = PF02902)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben044scf00057559ctg000_14200-20246' '(p49042|vpe_ricco : 699.0) Vacuolar-processing enzyme precursor (EC 3.4.22.-) (VPE) - Ricinus communis (Castor bean) & (at1g62710 : 681.0) Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteases that is expressed specifically in seeds and is essential for the proper processing of storage proteins.; beta vacuolar processing enzyme (BETA-VPE); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis, response to salt stress, vacuolar protein processing; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C13, legumain (InterPro:IPR001096); BEST Arabidopsis thaliana protein match is: gamma vacuolar processing enzyme (TAIR:AT4G32940.1); Has 785 Blast hits to 783 proteins in 241 species: Archae - 4; Bacteria - 10; Metazoa - 274; Fungi - 115; Plants - 253; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|36562 : 658.0) no description available & (gnl|cdd|85592 : 409.0) no description available & (reliability: 1362.0) & (original description: Putative lenS, Description = Putative preprolegumain, PFAM = PF01650)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf00355_229761-232186' '(q10993|cytb_helan : 90.9) Cysteine proteinase inhibitor B (Cystatin B) (SCB) - Helianthus annuus (Common sunflower) & (at2g31980 : 87.4) PHYTOCYSTATIN 2 (CYS2); FUNCTIONS IN: cysteine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I25, cystatin, conserved site (InterPro:IPR018073), Proteinase inhibitor I25, cystatin (InterPro:IPR000010), Proteinase inhibitor I25, cystatin, conserved region (InterPro:IPR020381); BEST Arabidopsis thaliana protein match is: cystatin B (TAIR:AT3G12490.2); Has 619 Blast hits to 613 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 610; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative CYS4, Description = Cysteine proteinase inhibitor, PFAM = PF16845)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf00397_1042830-1093441' '(at1g09730 : 356.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT4G33620.1). & (gnl|cdd|34761 : 130.0) no description available & (gnl|cdd|35998 : 113.0) no description available & (reliability: 712.0) & (original description: Putative ULP2B, Description = Putative ubiquitin-like-specific protease 2B, PFAM = PF02902)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf00397_1042904-1093962' '(at1g09730 : 277.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT4G33620.1). & (gnl|cdd|34761 : 104.0) no description available & (gnl|cdd|35997 : 88.9) no description available & (reliability: 554.0) & (original description: Putative ULP2B, Description = Putative ubiquitin-like-specific protease 2B, PFAM = PF02902)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf00690_54937-63116' '(at3g57810 : 280.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT2G38025.1); Has 624 Blast hits to 624 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 265; Fungi - 54; Plants - 235; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|37817 : 150.0) no description available & (gnl|cdd|85961 : 89.9) no description available & (reliability: 560.0) & (original description: Putative At3g57810, Description = OTU domain-containing protein At3g57810, PFAM = PF02338)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf00862_285574-290798' '(q06445|cyti_vigun : 125.0) Cysteine proteinase inhibitor (Cystatin) - Vigna unguiculata (Cowpea) & (at3g12490 : 118.0) Encodes a protein with cysteine proteinase inhibitor activity. Overexpression increases tolerance to abiotic stressors (i.e.salt,osmitic, cold stress).; cystatin B (CYSB); FUNCTIONS IN: cysteine-type endopeptidase inhibitor activity, cobalt ion binding; INVOLVED IN: response to abiotic stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I25, cystatin, conserved site (InterPro:IPR018073), Proteinase inhibitor I25, cystatin, conserved region (InterPro:IPR020381), Proteinase inhibitor I25, cystatin (InterPro:IPR000010); BEST Arabidopsis thaliana protein match is: Cystatin/monellin family protein (TAIR:AT5G05110.1); Has 755 Blast hits to 732 proteins in 99 species: Archae - 0; Bacteria - 2; Metazoa - 28; Fungi - 0; Plants - 721; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative cc3, Description = Cysteine proteinase inhibitor, PFAM = PF16845)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf01064_406082-409454' '(at5g45890 : 387.0) Senescence-associated gene 12 (SAG12) encoding a cysteine protease influenced by cytokinin, auxin, and sugars.Localized to special vacuole found during senescence called senescence associated vacuoles which are different from central vacuole in the tonoplast composition and pH.; senescence-associated gene 12 (SAG12); CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT3G49340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o65039|cysep_ricco : 370.0) Vignain precursor (EC 3.4.22.-) (Cysteine endopeptidase) - Ricinus communis (Castor bean) & (gnl|cdd|84529 : 292.0) no description available & (gnl|cdd|36756 : 288.0) no description available & (reliability: 774.0) & (original description: Putative cp8, Description = Putative cysteine protease 8, PFAM = PF08246;PF00112)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf01064_409455-413266' '(at3g49340 : 334.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT2G27420.1); Has 7805 Blast hits to 7737 proteins in 710 species: Archae - 57; Bacteria - 222; Metazoa - 3269; Fungi - 4; Plants - 1892; Viruses - 135; Other Eukaryotes - 2226 (source: NCBI BLink). & (p25803|cysep_phavu : 289.0) Vignain precursor (EC 3.4.22.-) (Bean endopeptidase) (Cysteine proteinase EP-C1) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|36756 : 264.0) no description available & (gnl|cdd|84529 : 263.0) no description available & (reliability: 668.0) & (original description: Putative pip1, Description = Phytophthora-inhibited protease 1, PFAM = PF08246;PF00112)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf01269_581347-589136' '(at1g50670 : 361.0) OTU-like cysteine protease family protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); Has 406 Blast hits to 406 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 136; Plants - 63; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|38498 : 295.0) no description available & (gnl|cdd|35098 : 108.0) no description available & (reliability: 722.0) & (original description: Putative YOD1, Description = Ubiquitin thioesterase OTU1, PFAM = PF02338)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf01281_834987-837667' '(at5g60190 : 244.0) Encodes a protein that can cleave residues from the C-terminus of RUB1 to prepare it for conjugation to target proteins.; Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity, NEDD8-specific protease activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38456 : 183.0) no description available & (reliability: 488.0) & (original description: Putative NEDP1, Description = NEDD8-specific protease 1, PFAM = PF02902)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf01365_616493-644843' '(at1g09730 : 370.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT4G33620.1). & (gnl|cdd|34761 : 137.0) no description available & (gnl|cdd|35997 : 115.0) no description available & (reliability: 740.0) & (original description: Putative ULP2A, Description = Putative ubiquitin-like-specific protease 2B, PFAM = PF02902)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf01369_70056-74110' '(at4g35350 : 532.0) tracheary element vacuolar protein; xylem cysteine peptidase 1 (XCP1); FUNCTIONS IN: cysteine-type peptidase activity, cysteine-type endopeptidase activity; INVOLVED IN: proteolysis, developmental programmed cell death; LOCATED IN: plant-type vacuole; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: xylem cysteine peptidase 2 (TAIR:AT1G20850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p25776|orya_orysa : 369.0) Oryzain alpha chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) & (gnl|cdd|84529 : 302.0) no description available & (gnl|cdd|36755 : 286.0) no description available & (reliability: 1064.0) & (original description: Putative scp4, Description = Cysteine protease-4, PFAM = PF08246;PF00112)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf01445_48569-53417' '(at5g60360 : 530.0) Encodes a senescence-associated thiol protease.; aleurain-like protease (ALP); CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT3G45310.1); Has 8252 Blast hits to 8181 proteins in 792 species: Archae - 69; Bacteria - 357; Metazoa - 3329; Fungi - 10; Plants - 1862; Viruses - 142; Other Eukaryotes - 2483 (source: NCBI BLink). & (q10717|cysp2_maize : 506.0) Cysteine proteinase 2 precursor (EC 3.4.22.-) - Zea mays (Maize) & (gnl|cdd|36756 : 303.0) no description available & (gnl|cdd|30292 : 296.0) no description available & (reliability: 1060.0) & (original description: Putative catH, Description = Cathepsin H, PFAM = PF08246;PF00112)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf01455_240378-245745' '(at1g02305 : 528.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis, regulation of catalytic activity; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Peptidase C1A, cathepsin B (InterPro:IPR015643), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169), Peptidase C1A, propeptide (InterPro:IPR012599); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G02300.1); Has 7484 Blast hits to 7435 proteins in 695 species: Archae - 51; Bacteria - 161; Metazoa - 3268; Fungi - 4; Plants - 1732; Viruses - 146; Other Eukaryotes - 2122 (source: NCBI BLink). & (gnl|cdd|30294 : 342.0) no description available & (gnl|cdd|36756 : 218.0) no description available & (p05167|aleu_horvu : 115.0) Thiol protease aleurain precursor (EC 3.4.22.16) - Hordeum vulgare (Barley) & (reliability: 1056.0) & (original description: Putative cat1, Description = Putative cathepsin B-like protease, PFAM = PF00112;PF08127)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf01658_35407-40866' '(at1g09850 : 516.0) Arabidopsis thaliana papain-like cysteine peptidase; xylem bark cysteine peptidase 3 (XBCP3); FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Granulin (InterPro:IPR000118), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT5G43060.1); Has 8836 Blast hits to 8016 proteins in 749 species: Archae - 59; Bacteria - 272; Metazoa - 4224; Fungi - 4; Plants - 1933; Viruses - 132; Other Eukaryotes - 2212 (source: NCBI BLink). & (p25776|orya_orysa : 355.0) Oryzain alpha chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) & (gnl|cdd|36756 : 278.0) no description available & (gnl|cdd|84529 : 276.0) no description available & (reliability: 1032.0) & (original description: Putative cp1, Description = Cysteine protease, PFAM = PF00396;PF00112;PF08246)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf01701_14465-20083' '(at4g39090 : 528.0) Similar to cysteine proteinases, induced by desiccation but not abscisic acid. Required for RRS1-R mediated resistance against Ralstonia solanacearum. Interacts with the R. solanacearum type III effector PopP2. RD19 associates with PopP2 to form a nuclear complex that is required for activation of the RRS1-Rñmediated resistance response.; RESPONSIVE TO DEHYDRATION 19 (RD19); CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Papain family cysteine protease (TAIR:AT2G21430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p25804|cysp_pea : 517.0) Cysteine proteinase 15A precursor (EC 3.4.22.-) (Turgor-responsive protein 15A) - Pisum sativum (Garden pea) & (gnl|cdd|36755 : 458.0) no description available & (gnl|cdd|30292 : 270.0) no description available & (reliability: 1056.0) & (original description: Putative cpr2, Description = Putative preprocysteine proteinase, PFAM = PF08246;PF00112)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf01701_701610-714186' '(at1g09850 : 525.0) Arabidopsis thaliana papain-like cysteine peptidase; xylem bark cysteine peptidase 3 (XBCP3); FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Granulin (InterPro:IPR000118), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT5G43060.1); Has 8836 Blast hits to 8016 proteins in 749 species: Archae - 59; Bacteria - 272; Metazoa - 4224; Fungi - 4; Plants - 1933; Viruses - 132; Other Eukaryotes - 2212 (source: NCBI BLink). & (p25776|orya_orysa : 360.0) Oryzain alpha chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) & (gnl|cdd|36755 : 279.0) no description available & (gnl|cdd|84529 : 276.0) no description available & (reliability: 1050.0) & (original description: Putative scp1, Description = Cysteine protease-1, PFAM = PF00112;PF08246;PF00396)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf01958_227267-229638' '(at5g47550 : 111.0) Cystatin/monellin superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I25, cystatin (InterPro:IPR000010), Proteinase inhibitor I25, cystatin, conserved region (InterPro:IPR020381); BEST Arabidopsis thaliana protein match is: Cystatin/monellin superfamily protein (TAIR:AT4G16500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative CYS5, Description = Cysteine proteinase inhibitor, PFAM = PF16845)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf02002_37231-39880' '(at5g47550 : 105.0) Cystatin/monellin superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I25, cystatin (InterPro:IPR000010), Proteinase inhibitor I25, cystatin, conserved region (InterPro:IPR020381); BEST Arabidopsis thaliana protein match is: Cystatin/monellin superfamily protein (TAIR:AT4G16500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative CYS2, Description = Cysteine proteinase inhibitor, PFAM = PF16845)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf02048_194008-196418' '(at5g47550 : 118.0) Cystatin/monellin superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I25, cystatin (InterPro:IPR000010), Proteinase inhibitor I25, cystatin, conserved region (InterPro:IPR020381); BEST Arabidopsis thaliana protein match is: Cystatin/monellin superfamily protein (TAIR:AT4G16500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative CYS9, Description = Cysteine proteinase inhibitor, PFAM = PF16845)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf02159_98109-101515' '(o65039|cysep_ricco : 506.0) Vignain precursor (EC 3.4.22.-) (Cysteine endopeptidase) - Ricinus communis (Castor bean) & (at5g50260 : 476.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT3G48340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84529 : 306.0) no description available & (gnl|cdd|36756 : 283.0) no description available & (reliability: 952.0) & (original description: Putative ccyp, Description = Cysteine protease, PFAM = PF08246;PF00112)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf02336_27379-43696' '(at1g09850 : 356.0) Arabidopsis thaliana papain-like cysteine peptidase; xylem bark cysteine peptidase 3 (XBCP3); FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Granulin (InterPro:IPR000118), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT5G43060.1); Has 8836 Blast hits to 8016 proteins in 749 species: Archae - 59; Bacteria - 272; Metazoa - 4224; Fungi - 4; Plants - 1933; Viruses - 132; Other Eukaryotes - 2212 (source: NCBI BLink). & (p25776|orya_orysa : 340.0) Oryzain alpha chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) & (gnl|cdd|30292 : 263.0) no description available & (gnl|cdd|36755 : 262.0) no description available & (reliability: 712.0) & (original description: Putative cp1, Description = Cysteine protease, PFAM = PF00396;PF00112;PF08246)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf02336_53483-58778' '(at1g09850 : 378.0) Arabidopsis thaliana papain-like cysteine peptidase; xylem bark cysteine peptidase 3 (XBCP3); FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Granulin (InterPro:IPR000118), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT5G43060.1); Has 8836 Blast hits to 8016 proteins in 749 species: Archae - 59; Bacteria - 272; Metazoa - 4224; Fungi - 4; Plants - 1933; Viruses - 132; Other Eukaryotes - 2212 (source: NCBI BLink). & (p25776|orya_orysa : 354.0) Oryzain alpha chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) & (gnl|cdd|36755 : 272.0) no description available & (gnl|cdd|30292 : 270.0) no description available & (reliability: 756.0) & (original description: Putative CAC1, Description = CAC1 protein, PFAM = PF00112;PF00396;PF08246)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf02468_646512-650908' '(at3g54940 : 550.0) Papain family cysteine protease; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, sepal, carpel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Papain family cysteine protease (TAIR:AT2G21430.1); Has 7716 Blast hits to 7658 proteins in 713 species: Archae - 63; Bacteria - 225; Metazoa - 3256; Fungi - 4; Plants - 1843; Viruses - 138; Other Eukaryotes - 2187 (source: NCBI BLink). & (gnl|cdd|36755 : 434.0) no description available & (p25804|cysp_pea : 415.0) Cysteine proteinase 15A precursor (EC 3.4.22.-) (Turgor-responsive protein 15A) - Pisum sativum (Garden pea) & (gnl|cdd|30292 : 270.0) no description available & (reliability: 1100.0) & (original description: Putative RD19D, Description = Probable cysteine protease RD19D, PFAM = PF00112;PF08246)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf02575_249511-254168' '(at5g43060 : 455.0) Granulin repeat cysteine protease family protein; FUNCTIONS IN: cysteine-type peptidase activity, cysteine-type endopeptidase activity; INVOLVED IN: response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Granulin (InterPro:IPR000118), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT1G47128.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p25776|orya_orysa : 432.0) Oryzain alpha chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) & (gnl|cdd|36756 : 299.0) no description available & (gnl|cdd|84529 : 289.0) no description available & (reliability: 910.0) & (original description: Putative scp5, Description = Cysteine protease-5, PFAM = PF00112;PF08246)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf02625_109469-113134' '(o65039|cysep_ricco : 490.0) Vignain precursor (EC 3.4.22.-) (Cysteine endopeptidase) - Ricinus communis (Castor bean) & (at5g50260 : 469.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT3G48340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84529 : 306.0) no description available & (gnl|cdd|36756 : 287.0) no description available & (reliability: 938.0) & (original description: Putative CYSEP, Description = Vignain, PFAM = PF00112;PF08246)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf02663_57255-64965' '(at2g27350 : 410.0) OTU-like cysteine protease family protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: SEC-C motif-containing protein / OTU-like cysteine protease family protein (TAIR:AT5G67170.2). & (gnl|cdd|37816 : 122.0) no description available & (gnl|cdd|85961 : 107.0) no description available & (reliability: 820.0) & (original description: Putative OTU6, Description = OTU-containing deubiquitinating enzyme OTU6, PFAM = PF02338)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf02976_4148-10388' '(at4g01610 : 474.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis, regulation of catalytic activity; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Peptidase C1A, cathepsin B (InterPro:IPR015643), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169), Peptidase C1A, propeptide (InterPro:IPR012599); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G02305.1); Has 7406 Blast hits to 7364 proteins in 687 species: Archae - 57; Bacteria - 153; Metazoa - 3244; Fungi - 4; Plants - 1710; Viruses - 146; Other Eukaryotes - 2092 (source: NCBI BLink). & (gnl|cdd|30294 : 354.0) no description available & (gnl|cdd|36756 : 230.0) no description available & (p05167|aleu_horvu : 105.0) Thiol protease aleurain precursor (EC 3.4.22.16) - Hordeum vulgare (Barley) & (reliability: 948.0) & (original description: Putative CTSB, Description = Cathepsin B, PFAM = PF00112;PF08127)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf03308_42665-45024' '(at5g47550 : 100.0) Cystatin/monellin superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I25, cystatin (InterPro:IPR000010), Proteinase inhibitor I25, cystatin, conserved region (InterPro:IPR020381); BEST Arabidopsis thaliana protein match is: Cystatin/monellin superfamily protein (TAIR:AT4G16500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative CYS2, Description = Cysteine proteinase inhibitor, PFAM = PF16845)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf03309_576200-579512' '(gnl|cdd|36756 : 283.0) no description available & (at5g45890 : 259.0) Senescence-associated gene 12 (SAG12) encoding a cysteine protease influenced by cytokinin, auxin, and sugars.Localized to special vacuole found during senescence called senescence associated vacuoles which are different from central vacuole in the tonoplast composition and pH.; senescence-associated gene 12 (SAG12); CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT3G49340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30292 : 259.0) no description available & (p25776|orya_orysa : 233.0) Oryzain alpha chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) & (reliability: 518.0) & (original description: Putative Rcr3, Description = Cysteine protease, PFAM = PF00112;PF08246)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf03309_604617-607726' '(at5g45890 : 388.0) Senescence-associated gene 12 (SAG12) encoding a cysteine protease influenced by cytokinin, auxin, and sugars.Localized to special vacuole found during senescence called senescence associated vacuoles which are different from central vacuole in the tonoplast composition and pH.; senescence-associated gene 12 (SAG12); CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT3G49340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o65039|cysep_ricco : 370.0) Vignain precursor (EC 3.4.22.-) (Cysteine endopeptidase) - Ricinus communis (Castor bean) & (gnl|cdd|84529 : 298.0) no description available & (gnl|cdd|36756 : 293.0) no description available & (reliability: 776.0) & (original description: Putative cp8, Description = Putative cysteine protease 8, PFAM = PF08246;PF00112)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf03514_3711-9220' '(at3g45310 : 512.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: aleurain-like protease (TAIR:AT5G60360.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q10717|cysp2_maize : 483.0) Cysteine proteinase 2 precursor (EC 3.4.22.-) - Zea mays (Maize) & (gnl|cdd|36756 : 292.0) no description available & (gnl|cdd|30292 : 288.0) no description available & (reliability: 1024.0) & (original description: Putative catH, Description = Cathepsin H, PFAM = PF08246;PF00112)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf03565_877324-889203' '(at5g04250 : 357.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT5G03330.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37816 : 206.0) no description available & (gnl|cdd|85961 : 90.6) no description available & (reliability: 714.0) & (original description: Putative OTU9, Description = At5g04250, PFAM = PF02338)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf04007_125083-130446' '(at1g47128 : 592.0) cysteine proteinase precursor-like protein/ dehydration stress-responsive gene (RD21); responsive to dehydration 21 (RD21); FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: response to water deprivation; LOCATED IN: apoplast, chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Granulin (InterPro:IPR000118), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT5G43060.1); Has 8846 Blast hits to 8044 proteins in 757 species: Archae - 51; Bacteria - 244; Metazoa - 4223; Fungi - 6; Plants - 1942; Viruses - 134; Other Eukaryotes - 2246 (source: NCBI BLink). & (p25776|orya_orysa : 587.0) Oryzain alpha chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) & (gnl|cdd|36756 : 294.0) no description available & (gnl|cdd|84529 : 292.0) no description available & (reliability: 1184.0) & (original description: Putative scp1, Description = Cysteine protease-1, PFAM = PF00396;PF08246;PF00112)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf04209_62902-66305' '(at5g45890 : 382.0) Senescence-associated gene 12 (SAG12) encoding a cysteine protease influenced by cytokinin, auxin, and sugars.Localized to special vacuole found during senescence called senescence associated vacuoles which are different from central vacuole in the tonoplast composition and pH.; senescence-associated gene 12 (SAG12); CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT3G49340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o65039|cysep_ricco : 369.0) Vignain precursor (EC 3.4.22.-) (Cysteine endopeptidase) - Ricinus communis (Castor bean) & (gnl|cdd|84529 : 298.0) no description available & (gnl|cdd|36756 : 292.0) no description available & (reliability: 764.0) & (original description: Putative CysP1, Description = BnaC07g18750D protein, PFAM = PF08246;PF00112)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf04487_621883-629494' '(at5g04250 : 259.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT5G03330.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37816 : 152.0) no description available & (reliability: 518.0) & (original description: Putative OTU9, Description = OTU-like cysteine protease family protein, putative, expressed, PFAM = PF02338)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf04488_97471-99878' '(at2g31980 : 85.9) PHYTOCYSTATIN 2 (CYS2); FUNCTIONS IN: cysteine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I25, cystatin, conserved site (InterPro:IPR018073), Proteinase inhibitor I25, cystatin (InterPro:IPR000010), Proteinase inhibitor I25, cystatin, conserved region (InterPro:IPR020381); BEST Arabidopsis thaliana protein match is: cystatin B (TAIR:AT3G12490.2); Has 619 Blast hits to 613 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 610; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative CPI, Description = Cysteine proteinase inhibitor, PFAM = PF16845)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf04558_346999-352304' '(q06445|cyti_vigun : 129.0) Cysteine proteinase inhibitor (Cystatin) - Vigna unguiculata (Cowpea) & (at3g12490 : 121.0) Encodes a protein with cysteine proteinase inhibitor activity. Overexpression increases tolerance to abiotic stressors (i.e.salt,osmitic, cold stress).; cystatin B (CYSB); FUNCTIONS IN: cysteine-type endopeptidase inhibitor activity, cobalt ion binding; INVOLVED IN: response to abiotic stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I25, cystatin, conserved site (InterPro:IPR018073), Proteinase inhibitor I25, cystatin, conserved region (InterPro:IPR020381), Proteinase inhibitor I25, cystatin (InterPro:IPR000010); BEST Arabidopsis thaliana protein match is: Cystatin/monellin family protein (TAIR:AT5G05110.1); Has 755 Blast hits to 732 proteins in 99 species: Archae - 0; Bacteria - 2; Metazoa - 28; Fungi - 0; Plants - 721; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|28923 : 81.3) no description available & (reliability: 242.0) & (original description: Putative cc3, Description = Cysteine proteinase inhibitor, PFAM = PF16845)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf04894_21380-30592' '(at3g22260 : 298.0) Cysteine proteinases superfamily protein; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT3G02070.1). & (gnl|cdd|37816 : 159.0) no description available & (gnl|cdd|85961 : 86.0) no description available & (reliability: 596.0) & (original description: Putative OTU11, Description = At3g22260, PFAM = PF02338)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf04921_198279-202484' '(at1g06260 : 384.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity, cysteine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT3G19390.1); Has 7835 Blast hits to 7772 proteins in 746 species: Archae - 66; Bacteria - 269; Metazoa - 3267; Fungi - 4; Plants - 1872; Viruses - 136; Other Eukaryotes - 2221 (source: NCBI BLink). & (o65039|cysep_ricco : 311.0) Vignain precursor (EC 3.4.22.-) (Cysteine endopeptidase) - Ricinus communis (Castor bean) & (gnl|cdd|84529 : 287.0) no description available & (gnl|cdd|36756 : 277.0) no description available & (reliability: 768.0) & (original description: Putative ccyp, Description = Cysteine proteinase, PFAM = PF00112;PF08246)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf04934_240540-249411' '(at1g06260 : 384.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity, cysteine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT3G19390.1); Has 7835 Blast hits to 7772 proteins in 746 species: Archae - 66; Bacteria - 269; Metazoa - 3267; Fungi - 4; Plants - 1872; Viruses - 136; Other Eukaryotes - 2221 (source: NCBI BLink). & (p25803|cysep_phavu : 311.0) Vignain precursor (EC 3.4.22.-) (Bean endopeptidase) (Cysteine proteinase EP-C1) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|84529 : 284.0) no description available & (gnl|cdd|36755 : 277.0) no description available & (reliability: 768.0) & (original description: Putative ccyp, Description = Cysteine proteinase, PFAM = PF00112;PF08246)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf05035_93478-95990' '(at5g43060 : 164.0) Granulin repeat cysteine protease family protein; FUNCTIONS IN: cysteine-type peptidase activity, cysteine-type endopeptidase activity; INVOLVED IN: response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Granulin (InterPro:IPR000118), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT1G47128.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p25776|orya_orysa : 131.0) Oryzain alpha chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) & (gnl|cdd|36755 : 88.9) no description available & (reliability: 328.0) & (original description: Putative cp1, Description = Cysteine proteinase, PFAM = PF08246)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf05035_93574-100957' '(at1g47128 : 563.0) cysteine proteinase precursor-like protein/ dehydration stress-responsive gene (RD21); responsive to dehydration 21 (RD21); FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: response to water deprivation; LOCATED IN: apoplast, chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Granulin (InterPro:IPR000118), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT5G43060.1); Has 8846 Blast hits to 8044 proteins in 757 species: Archae - 51; Bacteria - 244; Metazoa - 4223; Fungi - 6; Plants - 1942; Viruses - 134; Other Eukaryotes - 2246 (source: NCBI BLink). & (p25776|orya_orysa : 560.0) Oryzain alpha chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) & (gnl|cdd|84529 : 283.0) no description available & (gnl|cdd|36756 : 275.0) no description available & (reliability: 1126.0) & (original description: Putative scp1, Description = Cysteine protease-1, PFAM = PF00396;PF08246;PF00112)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf05081_208590-224610' '(at5g04250 : 273.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT5G03330.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37816 : 188.0) no description available & (gnl|cdd|85961 : 94.5) no description available & (reliability: 546.0) & (original description: Putative OTU9, Description = At5g04250, PFAM = PF02338)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf05135_193468-197540' '(at5g43060 : 450.0) Granulin repeat cysteine protease family protein; FUNCTIONS IN: cysteine-type peptidase activity, cysteine-type endopeptidase activity; INVOLVED IN: response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Granulin (InterPro:IPR000118), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT1G47128.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p25776|orya_orysa : 430.0) Oryzain alpha chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) & (gnl|cdd|36756 : 292.0) no description available & (gnl|cdd|84529 : 286.0) no description available & (reliability: 900.0) & (original description: Putative scp5, Description = Cysteine protease-5, PFAM = PF00112;PF08246)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf05231_197309-206418' '(at4g15880 : 432.0) EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease, located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering. Probably acts in the same pathway as NUA in affecting flowering time, vegetative and inflorescence development.; EARLY IN SHORT DAYS 4 (ESD4); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: UB-like protease 1A (TAIR:AT3G06910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35997 : 305.0) no description available & (gnl|cdd|34761 : 155.0) no description available & (reliability: 864.0) & (original description: Putative ESD4, Description = Ubiquitin-like-specific protease ESD4, PFAM = PF02902)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf05469_200558-205098' '(at1g09850 : 356.0) Arabidopsis thaliana papain-like cysteine peptidase; xylem bark cysteine peptidase 3 (XBCP3); FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Granulin (InterPro:IPR000118), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT5G43060.1); Has 8836 Blast hits to 8016 proteins in 749 species: Archae - 59; Bacteria - 272; Metazoa - 4224; Fungi - 4; Plants - 1933; Viruses - 132; Other Eukaryotes - 2212 (source: NCBI BLink). & (p25776|orya_orysa : 346.0) Oryzain alpha chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) & (gnl|cdd|30292 : 257.0) no description available & (gnl|cdd|36755 : 253.0) no description available & (reliability: 712.0) & (original description: Putative ctp, Description = Thiol protease, PFAM = PF00396;PF08246;PF00112)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf06508_105010-164365' '(at1g55350 : 3023.0) Similar to maize DEK1, a gene encoding a membrane protein of the calpain gene superfamily required for aleurone cell development in the endosperm of maize grains. A key component of the embryonic L1 cell-layer specification pathway.; DEFECTIVE KERNEL 1 (DEK1); FUNCTIONS IN: cysteine-type endopeptidase activity, calcium-dependent cysteine-type endopeptidase activity; INVOLVED IN: cell fate specification, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C2, calpain, domain III (InterPro:IPR022683), Peptidase C2, calpain, large subunit, domain III (InterPro:IPR022682), Peptidase, cysteine peptidase active site (InterPro:IPR000169), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Peptidase C2, calpain, catalytic domain (InterPro:IPR001300), Peptidase C2, calpain family (InterPro:IPR022684). & (gnl|cdd|28925 : 333.0) no description available & (gnl|cdd|35268 : 310.0) no description available & (reliability: 6046.0) & (original description: Putative DEK1, Description = Calpain-type cysteine protease DEK1, PFAM = PF01067;PF00648)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf06826_477216-504296' '(at3g22260 : 232.0) Cysteine proteinases superfamily protein; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT3G02070.1). & (gnl|cdd|37816 : 127.0) no description available & (gnl|cdd|85961 : 88.0) no description available & (reliability: 464.0) & (original description: Putative Os06g0669800, Description = OTU-like cysteine protease-like, PFAM = PF02338)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf07563_227431-239006' '(at5g43060 : 612.0) Granulin repeat cysteine protease family protein; FUNCTIONS IN: cysteine-type peptidase activity, cysteine-type endopeptidase activity; INVOLVED IN: response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Granulin (InterPro:IPR000118), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT1G47128.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p25776|orya_orysa : 566.0) Oryzain alpha chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) & (gnl|cdd|36756 : 311.0) no description available & (gnl|cdd|84529 : 305.0) no description available & (reliability: 1224.0) & (original description: Putative cp2, Description = Cysteine protease, PFAM = PF00396;PF00112;PF08246)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf07944_485412-506138' '(at5g67170 : 319.0) SEC-C motif-containing protein / OTU-like cysteine protease family protein; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323), SEC-C motif (InterPro:IPR004027); BEST Arabidopsis thaliana protein match is: OTU-like cysteine protease family protein (TAIR:AT2G27350.6); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37816 : 112.0) no description available & (gnl|cdd|85961 : 93.3) no description available & (reliability: 638.0) & (original description: Putative OTU7, Description = OTU-containing deubiquitinating enzyme OTU7 isoform i, PFAM = PF02338;PF02810)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf08515_43511-51670' '(at2g27350 : 376.0) OTU-like cysteine protease family protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: SEC-C motif-containing protein / OTU-like cysteine protease family protein (TAIR:AT5G67170.2). & (gnl|cdd|37816 : 130.0) no description available & (gnl|cdd|85961 : 101.0) no description available & (reliability: 752.0) & (original description: Putative otud5, Description = OTU domain-containing protein 5, PFAM = PF02338)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf08921_286906-290013' '(at5g45890 : 387.0) Senescence-associated gene 12 (SAG12) encoding a cysteine protease influenced by cytokinin, auxin, and sugars.Localized to special vacuole found during senescence called senescence associated vacuoles which are different from central vacuole in the tonoplast composition and pH.; senescence-associated gene 12 (SAG12); CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT3G49340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o65039|cysep_ricco : 372.0) Vignain precursor (EC 3.4.22.-) (Cysteine endopeptidase) - Ricinus communis (Castor bean) & (gnl|cdd|84529 : 297.0) no description available & (gnl|cdd|36756 : 291.0) no description available & (reliability: 774.0) & (original description: Putative cp8, Description = Putative cysteine protease 8, PFAM = PF00112;PF08246)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf08921_287573-319491' '(at2g27420 : 125.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity, cysteine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT3G49340.1); Has 7920 Blast hits to 7848 proteins in 742 species: Archae - 67; Bacteria - 274; Metazoa - 3329; Fungi - 4; Plants - 1897; Viruses - 138; Other Eukaryotes - 2211 (source: NCBI BLink). & (o65039|cysep_ricco : 95.5) Vignain precursor (EC 3.4.22.-) (Cysteine endopeptidase) - Ricinus communis (Castor bean) & (gnl|cdd|36756 : 90.6) no description available & (reliability: 250.0) & (original description: Putative cp8, Description = Cysteine protease, putative, PFAM = PF08246)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf08921_327462-331547' '(at2g27420 : 122.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity, cysteine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT3G49340.1); Has 7920 Blast hits to 7848 proteins in 742 species: Archae - 67; Bacteria - 274; Metazoa - 3329; Fungi - 4; Plants - 1897; Viruses - 138; Other Eukaryotes - 2211 (source: NCBI BLink). & (p00785|actn_actch : 92.0) Actinidain precursor (EC 3.4.22.14) (Actinidin) (Allergen Act c 1) - Actinidia chinensis (Kiwi) (Yangtao) & (gnl|cdd|36756 : 88.7) no description available & (reliability: 244.0) & (original description: Putative ccyp, Description = Cysteine protease, putative, PFAM = PF08246)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf09387_352996-363039' '(p49042|vpe_ricco : 684.0) Vacuolar-processing enzyme precursor (EC 3.4.22.-) (VPE) - Ricinus communis (Castor bean) & (at1g62710 : 670.0) Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteases that is expressed specifically in seeds and is essential for the proper processing of storage proteins.; beta vacuolar processing enzyme (BETA-VPE); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis, response to salt stress, vacuolar protein processing; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C13, legumain (InterPro:IPR001096); BEST Arabidopsis thaliana protein match is: gamma vacuolar processing enzyme (TAIR:AT4G32940.1); Has 785 Blast hits to 783 proteins in 241 species: Archae - 4; Bacteria - 10; Metazoa - 274; Fungi - 115; Plants - 253; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|36562 : 659.0) no description available & (gnl|cdd|85592 : 409.0) no description available & (reliability: 1340.0) & (original description: Putative lenS, Description = Putative preprolegumain, PFAM = PF01650)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf09885_71970-76814' '(at5g43060 : 562.0) Granulin repeat cysteine protease family protein; FUNCTIONS IN: cysteine-type peptidase activity, cysteine-type endopeptidase activity; INVOLVED IN: response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Granulin (InterPro:IPR000118), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT1G47128.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p25776|orya_orysa : 528.0) Oryzain alpha chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) & (gnl|cdd|36756 : 298.0) no description available & (gnl|cdd|84529 : 292.0) no description available & (reliability: 1124.0) & (original description: Putative cp2, Description = Cysteine protease, PFAM = PF00396;PF08246;PF00112)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf10524_102501-114170' '(at4g15880 : 368.0) EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease, located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering. Probably acts in the same pathway as NUA in affecting flowering time, vegetative and inflorescence development.; EARLY IN SHORT DAYS 4 (ESD4); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: UB-like protease 1A (TAIR:AT3G06910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35997 : 293.0) no description available & (gnl|cdd|34761 : 157.0) no description available & (reliability: 736.0) & (original description: Putative ESD4, Description = Ubiquitin-like-specific protease ESD4, PFAM = PF02902)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf10535_90480-99616' '(at5g04250 : 275.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT5G03330.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37816 : 190.0) no description available & (gnl|cdd|85961 : 94.1) no description available & (reliability: 550.0) & (original description: Putative OTU9, Description = At5g04250, PFAM = PF02338)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf10749_56341-66695' '(at1g50670 : 333.0) OTU-like cysteine protease family protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); Has 406 Blast hits to 406 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 136; Plants - 63; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|38498 : 264.0) no description available & (gnl|cdd|35098 : 95.5) no description available & (reliability: 666.0) & (original description: Putative yod1, Description = Ubiquitin thioesterase OTU1, PFAM = )' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf11684_21956-26359' '(at3g62940 : 274.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: SEC-C motif-containing protein / OTU-like cysteine protease family protein (TAIR:AT5G67170.1). & (gnl|cdd|37817 : 239.0) no description available & (gnl|cdd|85961 : 95.7) no description available & (reliability: 548.0) & (original description: Putative OTU6B, Description = Otu domain-containing protein 6b, PFAM = PF02338)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf11750_16014-20211' '(at3g57810 : 197.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT2G38025.1); Has 624 Blast hits to 624 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 265; Fungi - 54; Plants - 235; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|37817 : 123.0) no description available & (gnl|cdd|85961 : 84.9) no description available & (reliability: 394.0) & (original description: Putative KK1_040379, Description = OTU domain-containing protein 6B, PFAM = PF02338)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf12290_31643-39548' '(at3g22260 : 301.0) Cysteine proteinases superfamily protein; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT3G02070.1). & (gnl|cdd|37816 : 157.0) no description available & (gnl|cdd|85961 : 88.0) no description available & (reliability: 602.0) & (original description: Putative OTU11, Description = At3g22260, PFAM = PF02338)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf12813_1-6852' '(at5g43060 : 593.0) Granulin repeat cysteine protease family protein; FUNCTIONS IN: cysteine-type peptidase activity, cysteine-type endopeptidase activity; INVOLVED IN: response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Granulin (InterPro:IPR000118), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT1G47128.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p25776|orya_orysa : 553.0) Oryzain alpha chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) & (gnl|cdd|36756 : 296.0) no description available & (gnl|cdd|84529 : 291.0) no description available & (reliability: 1186.0) & (original description: Putative RD21B, Description = Probable cysteine protease RD21B, PFAM = PF00112;PF08246;PF00396)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf12983_281735-287048' '(at3g12490 : 242.0) Encodes a protein with cysteine proteinase inhibitor activity. Overexpression increases tolerance to abiotic stressors (i.e.salt,osmitic, cold stress).; cystatin B (CYSB); FUNCTIONS IN: cysteine-type endopeptidase inhibitor activity, cobalt ion binding; INVOLVED IN: response to abiotic stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I25, cystatin, conserved site (InterPro:IPR018073), Proteinase inhibitor I25, cystatin, conserved region (InterPro:IPR020381), Proteinase inhibitor I25, cystatin (InterPro:IPR000010); BEST Arabidopsis thaliana protein match is: Cystatin/monellin family protein (TAIR:AT5G05110.1); Has 755 Blast hits to 732 proteins in 99 species: Archae - 0; Bacteria - 2; Metazoa - 28; Fungi - 0; Plants - 721; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (q06445|cyti_vigun : 124.0) Cysteine proteinase inhibitor (Cystatin) - Vigna unguiculata (Cowpea) & (reliability: 484.0) & (original description: Putative CYS7, Description = Cysteine proteinase inhibitor 7, PFAM = PF16845)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf14344_224998-233022' '(at3g57810 : 234.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT2G38025.1); Has 624 Blast hits to 624 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 265; Fungi - 54; Plants - 235; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|37817 : 127.0) no description available & (gnl|cdd|85961 : 82.6) no description available & (reliability: 468.0) & (original description: Putative At3g57810, Description = OTU domain-containing protein At3g57810, PFAM = PF02338)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf15022_29275-34007' '(at4g39090 : 551.0) Similar to cysteine proteinases, induced by desiccation but not abscisic acid. Required for RRS1-R mediated resistance against Ralstonia solanacearum. Interacts with the R. solanacearum type III effector PopP2. RD19 associates with PopP2 to form a nuclear complex that is required for activation of the RRS1-Rñmediated resistance response.; RESPONSIVE TO DEHYDRATION 19 (RD19); CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Papain family cysteine protease (TAIR:AT2G21430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p25804|cysp_pea : 498.0) Cysteine proteinase 15A precursor (EC 3.4.22.-) (Turgor-responsive protein 15A) - Pisum sativum (Garden pea) & (gnl|cdd|36755 : 469.0) no description available & (gnl|cdd|84529 : 285.0) no description available & (reliability: 1102.0) & (original description: Putative paC1, Description = Putative papain-like cysteine proteinase, PFAM = PF08246;PF00112)' T '29.5.3' 'protein.degradation.cysteine protease' 'niben101scf21813_91181-100003' '(at3g12490 : 249.0) Encodes a protein with cysteine proteinase inhibitor activity. Overexpression increases tolerance to abiotic stressors (i.e.salt,osmitic, cold stress).; cystatin B (CYSB); FUNCTIONS IN: cysteine-type endopeptidase inhibitor activity, cobalt ion binding; INVOLVED IN: response to abiotic stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I25, cystatin, conserved site (InterPro:IPR018073), Proteinase inhibitor I25, cystatin, conserved region (InterPro:IPR020381), Proteinase inhibitor I25, cystatin (InterPro:IPR000010); BEST Arabidopsis thaliana protein match is: Cystatin/monellin family protein (TAIR:AT5G05110.1); Has 755 Blast hits to 732 proteins in 99 species: Archae - 0; Bacteria - 2; Metazoa - 28; Fungi - 0; Plants - 721; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (q06445|cyti_vigun : 128.0) Cysteine proteinase inhibitor (Cystatin) - Vigna unguiculata (Cowpea) & (reliability: 498.0) & (original description: Putative CYS6, Description = Cysteine proteinase inhibitor 6, PFAM = PF16845)' T '29.5.4' 'protein.degradation.aspartate protease' 'nbv0.3scaffold99_31516-34829' '(at1g03230 : 349.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: response to salt stress; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G03220.1); Has 1391 Blast hits to 1386 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1391; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p13917|7sb1_soybn : 202.0) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic 7S globulin high kDa subunit; Basic 7S globulin low kDa subunit] - Glycine max (Soybean) & (gnl|cdd|36553 : 123.0) no description available & (reliability: 698.0) & (original description: Putative NEC4, Description = Nectarin IV, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'nbv0.3scaffold10644_22210-25556' '(at1g64830 : 364.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G33340.1); Has 3478 Blast hits to 3458 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 661; Fungi - 712; Plants - 1893; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36553 : 220.0) no description available & (gnl|cdd|84452 : 97.2) no description available & (reliability: 728.0) & (original description: Putative CDR1, Description = Aspartic proteinase CDR1, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'nbv0.3scaffold21204_23156-26672' '(at1g64830 : 340.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G33340.1); Has 3478 Blast hits to 3458 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 661; Fungi - 712; Plants - 1893; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36553 : 208.0) no description available & (gnl|cdd|84452 : 87.2) no description available & (reliability: 680.0) & (original description: Putative At2g35615, Description = Probable aspartic protease At2g35615, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'nbv0.3scaffold27175_16497-24504' '(at2g36670 : 556.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G22850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36553 : 225.0) no description available & (gnl|cdd|84452 : 113.0) no description available & (q6yny7|asp1_orysa : 93.2) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 1112.0) & (original description: Putative AP13, Description = Aspartic protease 13, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'nbv0.3scaffold27678_2214-7405' '(at4g33490 : 436.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G44130.1). & (q6yny7|asp1_orysa : 295.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (gnl|cdd|36553 : 204.0) no description available & (reliability: 834.0) & (original description: Putative ASP1, Description = Aspartic proteinase Asp1, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'nbv0.3scaffold29630_1489-4991' '(at3g20015 : 504.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G18490.1); Has 3754 Blast hits to 3736 proteins in 332 species: Archae - 0; Bacteria - 0; Metazoa - 1064; Fungi - 524; Plants - 1996; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|36553 : 246.0) no description available & (gnl|cdd|84452 : 81.8) no description available & (reliability: 1008.0) & (original description: Putative ASPG2, Description = Protein ASPARTIC PROTEASE IN GUARD CELL 2, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'nbv0.3scaffold35629_14430-21725' '(at5g10080 : 475.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT4G35880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36553 : 176.0) no description available & (gnl|cdd|84452 : 86.5) no description available & (q6yny7|asp1_orysa : 84.7) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 950.0) & (original description: Putative APF1, Description = Aspartyl protease family protein 1, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'nbv0.3scaffold36333_16287-19702' '(at1g25510 : 423.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G18490.1); Has 4139 Blast hits to 4120 proteins in 342 species: Archae - 0; Bacteria - 0; Metazoa - 1183; Fungi - 740; Plants - 2035; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|36553 : 238.0) no description available & (reliability: 846.0) & (original description: Putative nep2, Description = Aspartic proteinase nepenthesin-1, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'nbv0.3scaffold43870_3820-12516' '(at1g05840 : 354.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G02740.1); Has 3016 Blast hits to 2994 proteins in 298 species: Archae - 0; Bacteria - 0; Metazoa - 466; Fungi - 565; Plants - 1776; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink). & (gnl|cdd|36553 : 99.5) no description available & (reliability: 708.0) & (original description: Putative BnaA05g12860D, Description = BnaA05g12860D protein, PFAM = PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'nbv0.3scaffold54623_6230-9687' '(at4g16563 : 457.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G45120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36553 : 179.0) no description available & (reliability: 914.0) & (original description: Putative At4g16563, Description = Probable aspartyl protease At4g16563, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'nbv0.3scaffold58610_6866-11584' '(p42211|asprx_orysa : 476.0) Aspartic proteinase precursor (EC 3.4.23.-) - Oryza sativa (Rice) & (at1g11910 : 474.0) Encodes an aspartic proteinase that forms a heterodimer and is stable over a broad pH range (ph 3-8).; aspartic proteinase A1 (APA1); FUNCTIONS IN: endopeptidase activity; INVOLVED IN: proteolysis, response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Saposin-like (InterPro:IPR011001), Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138), Saposin B (InterPro:IPR008139), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Saposin-like aspartyl protease family protein (TAIR:AT1G62290.2); Has 7443 Blast hits to 5200 proteins in 420 species: Archae - 0; Bacteria - 2; Metazoa - 4134; Fungi - 1703; Plants - 675; Viruses - 0; Other Eukaryotes - 929 (source: NCBI BLink). & (gnl|cdd|84452 : 281.0) no description available & (gnl|cdd|36553 : 188.0) no description available & (reliability: 948.0) & (original description: Putative v1g81470, Description = Predicted protein, PFAM = PF00026;PF05184)' T '29.5.4' 'protein.degradation.aspartate protease' 'nbv0.3scaffold73172_241-3698' '(at1g25510 : 558.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G18490.1); Has 4139 Blast hits to 4120 proteins in 342 species: Archae - 0; Bacteria - 0; Metazoa - 1183; Fungi - 740; Plants - 2035; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|36553 : 238.0) no description available & (gnl|cdd|84452 : 90.3) no description available & (reliability: 1116.0) & (original description: Putative ASPG1, Description = Protein ASPARTIC PROTEASE IN GUARD CELL 1, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'nbv0.3scaffold81378_2773-6227' '(at3g18490 : 482.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G25510.1); Has 4095 Blast hits to 4076 proteins in 356 species: Archae - 0; Bacteria - 4; Metazoa - 1079; Fungi - 788; Plants - 1999; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|36553 : 239.0) no description available & (gnl|cdd|84452 : 89.5) no description available & (reliability: 928.0) & (original description: Putative ASPG1, Description = Protein ASPARTIC PROTEASE IN GUARD CELL 1, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'nbv0.5scaffold914_177327-196303' '(at1g64830 : 263.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G33340.1); Has 3478 Blast hits to 3458 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 661; Fungi - 712; Plants - 1893; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36553 : 165.0) no description available & (reliability: 526.0) & (original description: Putative AP1, Description = Eukaryotic aspartyl protease family protein, PFAM = PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'nbv0.5scaffold1745_92086-98613' '(gnl|cdd|36553 : 116.0) no description available & (at5g10760 : 114.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: apoplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G10770.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative PGSC0003DMG400043757, Description = , PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'nbv0.5scaffold2691_89469-98347' '(at5g10080 : 483.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT4G35880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36553 : 148.0) no description available & (gnl|cdd|84452 : 92.6) no description available & (reliability: 966.0) & (original description: Putative At5g10080, Description = Aspartic proteinase-like protein 1, PFAM = PF00026)' T '29.5.4' 'protein.degradation.aspartate protease' 'nbv0.5scaffold5564_37493-44636' '(at1g11910 : 517.0) Encodes an aspartic proteinase that forms a heterodimer and is stable over a broad pH range (ph 3-8).; aspartic proteinase A1 (APA1); FUNCTIONS IN: endopeptidase activity; INVOLVED IN: proteolysis, response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Saposin-like (InterPro:IPR011001), Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138), Saposin B (InterPro:IPR008139), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Saposin-like aspartyl protease family protein (TAIR:AT1G62290.2); Has 7443 Blast hits to 5200 proteins in 420 species: Archae - 0; Bacteria - 2; Metazoa - 4134; Fungi - 1703; Plants - 675; Viruses - 0; Other Eukaryotes - 929 (source: NCBI BLink). & (q42456|aspr1_orysa : 506.0) Aspartic proteinase oryzasin-1 precursor (EC 3.4.23.-) - Oryza sativa (Rice) & (gnl|cdd|84452 : 248.0) no description available & (gnl|cdd|36553 : 178.0) no description available & (reliability: 1034.0) & (original description: Putative ap1, Description = Aspartic proteinase, PFAM = PF03489;PF05184;PF00026)' T '29.5.4' 'protein.degradation.aspartate protease' 'nbv0.5scaffold8233_4343-7877' '(at1g01300 : 556.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis, response to karrikin; LOCATED IN: membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G61820.1); Has 3898 Blast hits to 3871 proteins in 332 species: Archae - 0; Bacteria - 0; Metazoa - 1165; Fungi - 579; Plants - 1953; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (gnl|cdd|36553 : 266.0) no description available & (gnl|cdd|84452 : 107.0) no description available & (reliability: 1112.0) & (original description: Putative APF2, Description = Aspartyl protease family protein 2, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben044scf00002834ctg022_1087-4553' '(at1g25510 : 551.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G18490.1); Has 4139 Blast hits to 4120 proteins in 342 species: Archae - 0; Bacteria - 0; Metazoa - 1183; Fungi - 740; Plants - 2035; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|36553 : 241.0) no description available & (gnl|cdd|84452 : 93.0) no description available & (reliability: 1102.0) & (original description: Putative ASPG1, Description = Protein ASPARTIC PROTEASE IN GUARD CELL 1, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben044scf00003555ctg001_1-9996' '(at2g43070 : 348.0) SIGNAL PEPTIDE PEPTIDASE-LIKE 3 (SPPL3); FUNCTIONS IN: peptidase activity, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plasma membrane; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22B, signal peptide peptidase (InterPro:IPR007369); BEST Arabidopsis thaliana protein match is: SIGNAL PEPTIDE PEPTIDASE-LIKE 5 (TAIR:AT1G05820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37653 : 325.0) no description available & (gnl|cdd|80354 : 150.0) no description available & (reliability: 696.0) & (original description: Putative MLF8, Description = Signal peptide peptidase-like 2B, PFAM = PF02225;PF04258)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben044scf00006803ctg009_7590-11396' '(at1g77480 : 414.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G44130.1); Has 1743 Blast hits to 1735 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 23; Plants - 1626; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (q6yny7|asp1_orysa : 282.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (gnl|cdd|36553 : 191.0) no description available & (reliability: 828.0) & (original description: Putative ASP1, Description = Aspartic proteinase Asp1, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben044scf00007904ctg004_1-7134' '(at5g60160 : 733.0) Zn-dependent exopeptidases superfamily protein; FUNCTIONS IN: aminopeptidase activity, zinc ion binding; INVOLVED IN: response to cadmium ion, proteolysis; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M18, aminopeptidase I (InterPro:IPR001948); BEST Arabidopsis thaliana protein match is: Zn-dependent exopeptidases superfamily protein (TAIR:AT5G04710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37807 : 692.0) no description available & (gnl|cdd|81042 : 513.0) no description available & (q45055|apea_borbu : 97.1) Probable M18-family aminopeptidase 1 (EC 3.4.11.-) - Borrelia burgdorferi (Lyme disease spirochete) & (reliability: 1466.0) & (original description: Putative dapA, Description = Aspartyl aminopeptidase, PFAM = PF02127)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben044scf00008298ctg011_433-7472' '(at1g05840 : 213.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G02740.1); Has 3016 Blast hits to 2994 proteins in 298 species: Archae - 0; Bacteria - 0; Metazoa - 466; Fungi - 565; Plants - 1776; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink). & (gnl|cdd|36553 : 84.9) no description available & (reliability: 426.0) & (original description: Putative At1g65240, Description = Putative ovule protein, PFAM = PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben044scf00012077ctg012_1-1924' '(at1g64830 : 259.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G33340.1); Has 3478 Blast hits to 3458 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 661; Fungi - 712; Plants - 1893; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36553 : 193.0) no description available & (gnl|cdd|84452 : 83.0) no description available & (reliability: 518.0) & (original description: Putative BnaA08g07350D, Description = BnaA08g07350D protein, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben044scf00018642ctg004_1-4921' '(at1g11910 : 650.0) Encodes an aspartic proteinase that forms a heterodimer and is stable over a broad pH range (ph 3-8).; aspartic proteinase A1 (APA1); FUNCTIONS IN: endopeptidase activity; INVOLVED IN: proteolysis, response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Saposin-like (InterPro:IPR011001), Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138), Saposin B (InterPro:IPR008139), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Saposin-like aspartyl protease family protein (TAIR:AT1G62290.2); Has 7443 Blast hits to 5200 proteins in 420 species: Archae - 0; Bacteria - 2; Metazoa - 4134; Fungi - 1703; Plants - 675; Viruses - 0; Other Eukaryotes - 929 (source: NCBI BLink). & (p42211|asprx_orysa : 646.0) Aspartic proteinase precursor (EC 3.4.23.-) - Oryza sativa (Rice) & (gnl|cdd|84452 : 289.0) no description available & (gnl|cdd|36553 : 205.0) no description available & (reliability: 1300.0) & (original description: Putative RAP, Description = Aspartic proteinase, PFAM = PF00026;PF03489;PF05184)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben044scf00019172ctg003_3725-7014' '(at5g37540 : 522.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G66180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36553 : 200.0) no description available & (reliability: 1028.0) & (original description: Putative At1g66180, Description = Putative ovule protein, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben044scf00024432ctg012_9-4251' '(at1g05840 : 383.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G02740.1); Has 3016 Blast hits to 2994 proteins in 298 species: Archae - 0; Bacteria - 0; Metazoa - 466; Fungi - 565; Plants - 1776; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink). & (gnl|cdd|36553 : 174.0) no description available & (reliability: 766.0) & (original description: Putative AP13, Description = Aspartic proteinase-like protein 2, PFAM = PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben044scf00024948ctg004_5127-8612' '(at2g17760 : 290.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT4G35880.1); Has 2486 Blast hits to 2479 proteins in 233 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 423; Plants - 1695; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|36553 : 105.0) no description available & (reliability: 580.0) & (original description: Putative APF1, Description = Aspartyl protease family protein, PFAM = PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben044scf00031086ctg000_678-6393' '(at2g17760 : 513.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT4G35880.1); Has 2486 Blast hits to 2479 proteins in 233 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 423; Plants - 1695; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|36553 : 197.0) no description available & (q6yny7|asp1_orysa : 92.4) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 1026.0) & (original description: Putative APF1, Description = Aspartyl protease family protein 1, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben044scf00031482ctg001_10967-15824' '(at1g11910 : 578.0) Encodes an aspartic proteinase that forms a heterodimer and is stable over a broad pH range (ph 3-8).; aspartic proteinase A1 (APA1); FUNCTIONS IN: endopeptidase activity; INVOLVED IN: proteolysis, response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Saposin-like (InterPro:IPR011001), Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138), Saposin B (InterPro:IPR008139), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Saposin-like aspartyl protease family protein (TAIR:AT1G62290.2); Has 7443 Blast hits to 5200 proteins in 420 species: Archae - 0; Bacteria - 2; Metazoa - 4134; Fungi - 1703; Plants - 675; Viruses - 0; Other Eukaryotes - 929 (source: NCBI BLink). & (q42456|aspr1_orysa : 569.0) Aspartic proteinase oryzasin-1 precursor (EC 3.4.23.-) - Oryza sativa (Rice) & (gnl|cdd|84452 : 287.0) no description available & (gnl|cdd|36553 : 197.0) no description available & (reliability: 1156.0) & (original description: Putative NaAP5, Description = Aspartic proteinase 5, PFAM = PF05184;PF00026;PF03489)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben044scf00031969ctg003_1-4678' '(at5g60160 : 441.0) Zn-dependent exopeptidases superfamily protein; FUNCTIONS IN: aminopeptidase activity, zinc ion binding; INVOLVED IN: response to cadmium ion, proteolysis; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M18, aminopeptidase I (InterPro:IPR001948); BEST Arabidopsis thaliana protein match is: Zn-dependent exopeptidases superfamily protein (TAIR:AT5G04710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37807 : 417.0) no description available & (gnl|cdd|81042 : 306.0) no description available & (reliability: 882.0) & (original description: Putative aap1, Description = Aspartyl aminopeptidase, PFAM = PF02127)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben044scf00032645ctg002_31011-41784' '(at2g43070 : 374.0) SIGNAL PEPTIDE PEPTIDASE-LIKE 3 (SPPL3); FUNCTIONS IN: peptidase activity, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plasma membrane; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22B, signal peptide peptidase (InterPro:IPR007369); BEST Arabidopsis thaliana protein match is: SIGNAL PEPTIDE PEPTIDASE-LIKE 5 (TAIR:AT1G05820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37653 : 344.0) no description available & (gnl|cdd|80354 : 160.0) no description available & (reliability: 748.0) & (original description: Putative MLF8, Description = Signal peptide peptidase-like 2B, PFAM = PF02225;PF04258)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben044scf00039330ctg000_24-3766' '(at1g25510 : 558.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G18490.1); Has 4139 Blast hits to 4120 proteins in 342 species: Archae - 0; Bacteria - 0; Metazoa - 1183; Fungi - 740; Plants - 2035; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|36553 : 242.0) no description available & (gnl|cdd|84452 : 91.5) no description available & (reliability: 1116.0) & (original description: Putative ASPG1, Description = Protein ASPARTIC PROTEASE IN GUARD CELL 1, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben044scf00045508ctg001_1-7486' '(at5g10080 : 401.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT4G35880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36553 : 142.0) no description available & (reliability: 802.0) & (original description: Putative BnaC09g46590D, Description = BnaC09g46590D protein, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf00083_415532-422285' '(at2g17760 : 442.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT4G35880.1); Has 2486 Blast hits to 2479 proteins in 233 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 423; Plants - 1695; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|36553 : 180.0) no description available & (q6yny7|asp1_orysa : 83.2) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 884.0) & (original description: Putative Os09g0542100, Description = Os09g0542100 protein, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf00270_639283-655614' '(at1g05840 : 617.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G02740.1); Has 3016 Blast hits to 2994 proteins in 298 species: Archae - 0; Bacteria - 0; Metazoa - 466; Fungi - 565; Plants - 1776; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink). & (gnl|cdd|36553 : 210.0) no description available & (q6yny7|asp1_orysa : 101.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (gnl|cdd|84452 : 80.7) no description available & (reliability: 1234.0) & (original description: Putative BnaC08g44450D, Description = BnaC08g44450D protein, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf00270_643528-655881' '(at1g05840 : 412.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G02740.1); Has 3016 Blast hits to 2994 proteins in 298 species: Archae - 0; Bacteria - 0; Metazoa - 466; Fungi - 565; Plants - 1776; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink). & (gnl|cdd|36553 : 141.0) no description available & (reliability: 824.0) & (original description: Putative At1g65240, Description = Aspartic proteinase-like protein 2, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf00314_58818-73468' '(at1g05820 : 543.0) SIGNAL PEPTIDE PEPTIDASE-LIKE 5 (SPPL5); FUNCTIONS IN: peptidase activity, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22B, signal peptide peptidase (InterPro:IPR007369); BEST Arabidopsis thaliana protein match is: SIGNAL PEPTIDE PEPTIDASE-LIKE 3 (TAIR:AT2G43070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37653 : 509.0) no description available & (gnl|cdd|67855 : 276.0) no description available & (reliability: 1050.0) & (original description: Putative SPPL2, Description = Signal peptide peptidase-like 2, PFAM = PF02225;PF04258)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf00317_845332-848789' '(at4g16563 : 452.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G45120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36553 : 174.0) no description available & (reliability: 904.0) & (original description: Putative dl4305c, Description = Eukaryotic aspartyl protease family protein, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf00370_277517-280698' '(p13917|7sb1_soybn : 339.0) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic 7S globulin high kDa subunit; Basic 7S globulin low kDa subunit] - Glycine max (Soybean) & (at1g03220 : 279.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: response to salt stress; LOCATED IN: cell wall, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G03230.1); Has 1398 Blast hits to 1391 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1396; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|36553 : 123.0) no description available & (reliability: 558.0) & (original description: Putative BG, Description = Basic 7S globulin, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf00448_455493-466982' '(at1g11910 : 744.0) Encodes an aspartic proteinase that forms a heterodimer and is stable over a broad pH range (ph 3-8).; aspartic proteinase A1 (APA1); FUNCTIONS IN: endopeptidase activity; INVOLVED IN: proteolysis, response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Saposin-like (InterPro:IPR011001), Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138), Saposin B (InterPro:IPR008139), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Saposin-like aspartyl protease family protein (TAIR:AT1G62290.2); Has 7443 Blast hits to 5200 proteins in 420 species: Archae - 0; Bacteria - 2; Metazoa - 4134; Fungi - 1703; Plants - 675; Viruses - 0; Other Eukaryotes - 929 (source: NCBI BLink). & (p42210|aspr_horvu : 697.0) Phytepsin precursor (EC 3.4.23.40) (Aspartic proteinase) [Contains: Phytepsin 32 kDa subunit; Phytepsin 29 kDa subunit; Phytepsin 16 kDa subunit; Phytepsin 11 kDa subunit] - Hordeum vulgare (Barley) & (gnl|cdd|84452 : 286.0) no description available & (gnl|cdd|36553 : 196.0) no description available & (reliability: 1488.0) & (original description: Putative APA1, Description = Aspartic proteinase A1, PFAM = PF03489;PF00026;PF05184)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf00502_75516-81579' '(at3g20015 : 521.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G18490.1); Has 3754 Blast hits to 3736 proteins in 332 species: Archae - 0; Bacteria - 0; Metazoa - 1064; Fungi - 524; Plants - 1996; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|36553 : 247.0) no description available & (gnl|cdd|84452 : 86.5) no description available & (reliability: 1042.0) & (original description: Putative ASPG2, Description = Protein ASPARTIC PROTEASE IN GUARD CELL 2, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf00542_815086-818375' '(at5g37540 : 527.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G66180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36553 : 201.0) no description available & (reliability: 1032.0) & (original description: Putative At5g37540, Description = AT5g37540/mpa22_p_70, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf00556_63605-75780' '(at5g04710 : 800.0) Zn-dependent exopeptidases superfamily protein; FUNCTIONS IN: aminopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M18, aminopeptidase I (InterPro:IPR001948); BEST Arabidopsis thaliana protein match is: Zn-dependent exopeptidases superfamily protein (TAIR:AT5G60160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37807 : 675.0) no description available & (gnl|cdd|81042 : 495.0) no description available & (q45055|apea_borbu : 125.0) Probable M18-family aminopeptidase 1 (EC 3.4.11.-) - Borrelia burgdorferi (Lyme disease spirochete) & (reliability: 1600.0) & (original description: Putative dapA, Description = Aspartyl aminopeptidase, PFAM = PF02127)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf00682_563724-572330' '(at2g36670 : 583.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G22850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36553 : 224.0) no description available & (gnl|cdd|84452 : 112.0) no description available & (q6yny7|asp1_orysa : 93.6) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 1166.0) & (original description: Putative AP26, Description = Aspartic proteinase, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf00725_298420-301874' '(at3g18490 : 491.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G25510.1); Has 4095 Blast hits to 4076 proteins in 356 species: Archae - 0; Bacteria - 4; Metazoa - 1079; Fungi - 788; Plants - 1999; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|36553 : 237.0) no description available & (gnl|cdd|84452 : 88.4) no description available & (reliability: 936.0) & (original description: Putative ASPG1, Description = Protein ASPARTIC PROTEASE IN GUARD CELL 1, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf00876_26538-30022' '(at1g01300 : 541.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis, response to karrikin; LOCATED IN: membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G61820.1); Has 3898 Blast hits to 3871 proteins in 332 species: Archae - 0; Bacteria - 0; Metazoa - 1165; Fungi - 579; Plants - 1953; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (gnl|cdd|36553 : 252.0) no description available & (gnl|cdd|84452 : 106.0) no description available & (reliability: 1082.0) & (original description: Putative APF2, Description = Aspartyl protease family protein 2, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf01188_851622-878237' '(at1g05840 : 564.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G02740.1); Has 3016 Blast hits to 2994 proteins in 298 species: Archae - 0; Bacteria - 0; Metazoa - 466; Fungi - 565; Plants - 1776; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink). & (gnl|cdd|36553 : 212.0) no description available & (q6yny7|asp1_orysa : 98.2) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (gnl|cdd|84452 : 84.1) no description available & (reliability: 1128.0) & (original description: Putative At1g65240, Description = Aspartic proteinase-like protein 2, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf01372_1245527-1250339' '(at1g11910 : 479.0) Encodes an aspartic proteinase that forms a heterodimer and is stable over a broad pH range (ph 3-8).; aspartic proteinase A1 (APA1); FUNCTIONS IN: endopeptidase activity; INVOLVED IN: proteolysis, response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Saposin-like (InterPro:IPR011001), Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138), Saposin B (InterPro:IPR008139), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Saposin-like aspartyl protease family protein (TAIR:AT1G62290.2); Has 7443 Blast hits to 5200 proteins in 420 species: Archae - 0; Bacteria - 2; Metazoa - 4134; Fungi - 1703; Plants - 675; Viruses - 0; Other Eukaryotes - 929 (source: NCBI BLink). & (q42456|aspr1_orysa : 479.0) Aspartic proteinase oryzasin-1 precursor (EC 3.4.23.-) - Oryza sativa (Rice) & (gnl|cdd|84452 : 238.0) no description available & (gnl|cdd|36553 : 161.0) no description available & (reliability: 958.0) & (original description: Putative ap1, Description = Aspartic proteinase, PFAM = PF05184;PF03489;PF00026)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf01376_361254-375712' '(at1g05820 : 539.0) SIGNAL PEPTIDE PEPTIDASE-LIKE 5 (SPPL5); FUNCTIONS IN: peptidase activity, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22B, signal peptide peptidase (InterPro:IPR007369); BEST Arabidopsis thaliana protein match is: SIGNAL PEPTIDE PEPTIDASE-LIKE 3 (TAIR:AT2G43070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37653 : 485.0) no description available & (gnl|cdd|67855 : 274.0) no description available & (reliability: 1020.0) & (original description: Putative SPPL5, Description = Signal peptide peptidase-like 5, PFAM = PF02225;PF04258)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf01520_100191-103510' '(at1g03220 : 509.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: response to salt stress; LOCATED IN: cell wall, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G03230.1); Has 1398 Blast hits to 1391 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1396; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (p13917|7sb1_soybn : 269.0) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic 7S globulin high kDa subunit; Basic 7S globulin low kDa subunit] - Glycine max (Soybean) & (gnl|cdd|36553 : 135.0) no description available & (reliability: 1018.0) & (original description: Putative NEC4, Description = Nectarin IV, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf01594_202293-206026' '(at2g03200 : 498.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G01300.1); Has 2634 Blast hits to 2609 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 441; Plants - 1862; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (gnl|cdd|36553 : 240.0) no description available & (gnl|cdd|84452 : 109.0) no description available & (q6yny7|asp1_orysa : 84.3) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 996.0) & (original description: Putative nep1, Description = Aspartic proteinase nepenthesin-1, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf01718_800910-804636' '(gnl|cdd|36553 : 122.0) no description available & (at3g18490 : 119.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G25510.1); Has 4095 Blast hits to 4076 proteins in 356 species: Archae - 0; Bacteria - 4; Metazoa - 1079; Fungi - 788; Plants - 1999; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative PGSC0003DMG400045930, Description = , PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf01782_350958-354978' '(at1g03220 : 306.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: response to salt stress; LOCATED IN: cell wall, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G03230.1); Has 1398 Blast hits to 1391 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1396; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (p13917|7sb1_soybn : 171.0) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic 7S globulin high kDa subunit; Basic 7S globulin low kDa subunit] - Glycine max (Soybean) & (gnl|cdd|36553 : 109.0) no description available & (reliability: 612.0) & (original description: Putative NEC4, Description = Xyloglucanase-specific endoglucanase inhibitor protein, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf01870_1022590-1030705' '(at5g10080 : 504.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT4G35880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36553 : 188.0) no description available & (gnl|cdd|84452 : 96.1) no description available & (q6yny7|asp1_orysa : 80.1) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 1008.0) & (original description: Putative At5g10080, Description = Aspartic proteinase-like protein 1, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf01961_73527-86091' '(at1g11910 : 774.0) Encodes an aspartic proteinase that forms a heterodimer and is stable over a broad pH range (ph 3-8).; aspartic proteinase A1 (APA1); FUNCTIONS IN: endopeptidase activity; INVOLVED IN: proteolysis, response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Saposin-like (InterPro:IPR011001), Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138), Saposin B (InterPro:IPR008139), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Saposin-like aspartyl protease family protein (TAIR:AT1G62290.2); Has 7443 Blast hits to 5200 proteins in 420 species: Archae - 0; Bacteria - 2; Metazoa - 4134; Fungi - 1703; Plants - 675; Viruses - 0; Other Eukaryotes - 929 (source: NCBI BLink). & (q42456|aspr1_orysa : 731.0) Aspartic proteinase oryzasin-1 precursor (EC 3.4.23.-) - Oryza sativa (Rice) & (gnl|cdd|84452 : 290.0) no description available & (gnl|cdd|36553 : 196.0) no description available & (reliability: 1548.0) & (original description: Putative ap1, Description = Aspartic proteinase, PFAM = PF03489;PF00026;PF05184)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf02124_15848-19934' '(at1g79720 : 517.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G10770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36553 : 214.0) no description available & (gnl|cdd|84452 : 99.2) no description available & (q6yny7|asp1_orysa : 84.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 1034.0) & (original description: Putative cnd41, Description = Aspartic proteinase nepenthesin-1, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf02145_972046-979204' '(at1g11910 : 803.0) Encodes an aspartic proteinase that forms a heterodimer and is stable over a broad pH range (ph 3-8).; aspartic proteinase A1 (APA1); FUNCTIONS IN: endopeptidase activity; INVOLVED IN: proteolysis, response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Saposin-like (InterPro:IPR011001), Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138), Saposin B (InterPro:IPR008139), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Saposin-like aspartyl protease family protein (TAIR:AT1G62290.2); Has 7443 Blast hits to 5200 proteins in 420 species: Archae - 0; Bacteria - 2; Metazoa - 4134; Fungi - 1703; Plants - 675; Viruses - 0; Other Eukaryotes - 929 (source: NCBI BLink). & (q42456|aspr1_orysa : 741.0) Aspartic proteinase oryzasin-1 precursor (EC 3.4.23.-) - Oryza sativa (Rice) & (gnl|cdd|84452 : 291.0) no description available & (gnl|cdd|36553 : 200.0) no description available & (reliability: 1606.0) & (original description: Putative ap2, Description = Aspartic proteinase, PFAM = PF03489;PF00026;PF05184)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf02170_130542-133107' '(at1g62290 : 143.0) Saposin-like aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis, lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, seedling growth, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Saposin-like (InterPro:IPR011001), Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138), Saposin B (InterPro:IPR008139), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: aspartic proteinase A1 (TAIR:AT1G11910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q42456|aspr1_orysa : 124.0) Aspartic proteinase oryzasin-1 precursor (EC 3.4.23.-) - Oryza sativa (Rice) & (gnl|cdd|84452 : 81.4) no description available & (reliability: 286.0) & (original description: Putative ap1, Description = Aspartic proteinase, PFAM = PF00026)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf02405_624256-644413' '(at2g36670 : 536.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G22850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36553 : 219.0) no description available & (gnl|cdd|84452 : 114.0) no description available & (q6yny7|asp1_orysa : 94.4) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 1072.0) & (original description: Putative AP13, Description = Aspartic protease 13, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf02844_913873-917186' '(at1g03230 : 346.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: response to salt stress; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G03220.1); Has 1391 Blast hits to 1386 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1391; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p13917|7sb1_soybn : 202.0) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic 7S globulin high kDa subunit; Basic 7S globulin low kDa subunit] - Glycine max (Soybean) & (gnl|cdd|36553 : 120.0) no description available & (reliability: 692.0) & (original description: Putative NEC4, Description = Nectarin IV, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf02914_23630-37286' '(at5g60160 : 742.0) Zn-dependent exopeptidases superfamily protein; FUNCTIONS IN: aminopeptidase activity, zinc ion binding; INVOLVED IN: response to cadmium ion, proteolysis; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M18, aminopeptidase I (InterPro:IPR001948); BEST Arabidopsis thaliana protein match is: Zn-dependent exopeptidases superfamily protein (TAIR:AT5G04710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37807 : 692.0) no description available & (gnl|cdd|81042 : 518.0) no description available & (q45055|apea_borbu : 97.1) Probable M18-family aminopeptidase 1 (EC 3.4.11.-) - Borrelia burgdorferi (Lyme disease spirochete) & (reliability: 1484.0) & (original description: Putative dapA, Description = Aspartyl aminopeptidase, PFAM = PF02127)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf03026_617698-665733' '(at5g10080 : 473.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT4G35880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36553 : 172.0) no description available & (gnl|cdd|84452 : 86.5) no description available & (q6yny7|asp1_orysa : 82.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 946.0) & (original description: Putative pco103562, Description = Pepsin A, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf03171_297828-305506' '(at1g11910 : 633.0) Encodes an aspartic proteinase that forms a heterodimer and is stable over a broad pH range (ph 3-8).; aspartic proteinase A1 (APA1); FUNCTIONS IN: endopeptidase activity; INVOLVED IN: proteolysis, response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Saposin-like (InterPro:IPR011001), Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138), Saposin B (InterPro:IPR008139), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Saposin-like aspartyl protease family protein (TAIR:AT1G62290.2); Has 7443 Blast hits to 5200 proteins in 420 species: Archae - 0; Bacteria - 2; Metazoa - 4134; Fungi - 1703; Plants - 675; Viruses - 0; Other Eukaryotes - 929 (source: NCBI BLink). & (q42456|aspr1_orysa : 622.0) Aspartic proteinase oryzasin-1 precursor (EC 3.4.23.-) - Oryza sativa (Rice) & (gnl|cdd|84452 : 259.0) no description available & (gnl|cdd|36553 : 179.0) no description available & (reliability: 1266.0) & (original description: Putative ap1, Description = Aspartic proteinase, PFAM = PF05184;PF00026;PF03489)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf03191_423364-426626' '(at1g03230 : 308.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: response to salt stress; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G03220.1); Has 1391 Blast hits to 1386 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1391; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p13917|7sb1_soybn : 207.0) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic 7S globulin high kDa subunit; Basic 7S globulin low kDa subunit] - Glycine max (Soybean) & (gnl|cdd|36553 : 119.0) no description available & (reliability: 616.0) & (original description: Putative BnaC09g38470D, Description = BnaC09g38470D protein, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf03191_442588-449809' '(at1g03220 : 515.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: response to salt stress; LOCATED IN: cell wall, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G03230.1); Has 1398 Blast hits to 1391 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1396; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (p13917|7sb1_soybn : 278.0) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic 7S globulin high kDa subunit; Basic 7S globulin low kDa subunit] - Glycine max (Soybean) & (gnl|cdd|36553 : 134.0) no description available & (reliability: 1030.0) & (original description: Putative BG, Description = Basic 7S globulin, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf03191_589478-592827' '(at1g03220 : 417.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: response to salt stress; LOCATED IN: cell wall, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G03230.1); Has 1398 Blast hits to 1391 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1396; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (p13917|7sb1_soybn : 243.0) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic 7S globulin high kDa subunit; Basic 7S globulin low kDa subunit] - Glycine max (Soybean) & (gnl|cdd|36553 : 131.0) no description available & (reliability: 834.0) & (original description: Putative NEC4, Description = Nectarin IV, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf03191_601689-605239' '(at1g03220 : 336.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: response to salt stress; LOCATED IN: cell wall, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G03230.1); Has 1398 Blast hits to 1391 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1396; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (p13917|7sb1_soybn : 232.0) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic 7S globulin high kDa subunit; Basic 7S globulin low kDa subunit] - Glycine max (Soybean) & (gnl|cdd|36553 : 122.0) no description available & (reliability: 672.0) & (original description: Putative XEGIP8, Description = Xyloglucan-specific endoglucanase inhibitor 8, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf03240_188602-191948' '(at1g66180 : 551.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G37540.1); Has 1897 Blast hits to 1884 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 164; Plants - 1696; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|36553 : 196.0) no description available & (reliability: 1102.0) & (original description: Putative BnaC04g55960D, Description = BnaC04g55960D protein, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf03436_387930-390619' '(at5g33340 : 130.0) Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation.; CONSTITUTIVE DISEASE RESISTANCE 1 (CDR1); CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G64830.1); Has 3792 Blast hits to 3768 proteins in 339 species: Archae - 0; Bacteria - 0; Metazoa - 807; Fungi - 843; Plants - 1930; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink). & (gnl|cdd|36553 : 102.0) no description available & (reliability: 234.0) & (original description: Putative AP51, Description = Aspartic proteinase nepenthesin-1, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf03481_145298-157655' '(at2g36670 : 551.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G22850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36553 : 222.0) no description available & (gnl|cdd|84452 : 113.0) no description available & (q6yny7|asp1_orysa : 98.2) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 1102.0) & (original description: Putative AP13, Description = Aspartic protease 13, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf03619_304140-307659' '(at1g64830 : 342.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G33340.1); Has 3478 Blast hits to 3458 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 661; Fungi - 712; Plants - 1893; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36553 : 208.0) no description available & (gnl|cdd|84452 : 88.8) no description available & (q6yny7|asp1_orysa : 80.9) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 684.0) & (original description: Putative AP1, Description = Eukaryotic aspartyl protease family protein, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf03710_1139709-1150209' '(at1g77480 : 410.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G44130.1); Has 1743 Blast hits to 1735 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 23; Plants - 1626; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (q6yny7|asp1_orysa : 276.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (gnl|cdd|36553 : 195.0) no description available & (reliability: 820.0) & (original description: Putative ASP1, Description = Aspartic proteinase Asp1, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf03830_69970-73436' '(at1g25510 : 549.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G18490.1); Has 4139 Blast hits to 4120 proteins in 342 species: Archae - 0; Bacteria - 0; Metazoa - 1183; Fungi - 740; Plants - 2035; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|36553 : 240.0) no description available & (gnl|cdd|84452 : 92.6) no description available & (reliability: 1098.0) & (original description: Putative ASPG2, Description = Protein ASPARTIC PROTEASE IN GUARD CELL 2, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf04060_302180-307319' '(at2g17760 : 517.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT4G35880.1); Has 2486 Blast hits to 2479 proteins in 233 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 423; Plants - 1695; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (gnl|cdd|36553 : 201.0) no description available & (q6yny7|asp1_orysa : 95.5) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (gnl|cdd|84452 : 80.7) no description available & (reliability: 1034.0) & (original description: Putative APF1, Description = Aspartyl protease family protein 1, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf04084_18069-23160' '(at1g11910 : 655.0) Encodes an aspartic proteinase that forms a heterodimer and is stable over a broad pH range (ph 3-8).; aspartic proteinase A1 (APA1); FUNCTIONS IN: endopeptidase activity; INVOLVED IN: proteolysis, response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Saposin-like (InterPro:IPR011001), Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138), Saposin B (InterPro:IPR008139), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Saposin-like aspartyl protease family protein (TAIR:AT1G62290.2); Has 7443 Blast hits to 5200 proteins in 420 species: Archae - 0; Bacteria - 2; Metazoa - 4134; Fungi - 1703; Plants - 675; Viruses - 0; Other Eukaryotes - 929 (source: NCBI BLink). & (q42456|aspr1_orysa : 648.0) Aspartic proteinase oryzasin-1 precursor (EC 3.4.23.-) - Oryza sativa (Rice) & (gnl|cdd|84452 : 284.0) no description available & (gnl|cdd|36553 : 203.0) no description available & (reliability: 1310.0) & (original description: Putative ap1, Description = Aspartic proteinase, PFAM = PF00026;PF05184;PF03489)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf04347_258331-261853' '(at1g01300 : 549.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis, response to karrikin; LOCATED IN: membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G61820.1); Has 3898 Blast hits to 3871 proteins in 332 species: Archae - 0; Bacteria - 0; Metazoa - 1165; Fungi - 579; Plants - 1953; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (gnl|cdd|36553 : 263.0) no description available & (gnl|cdd|84452 : 107.0) no description available & (reliability: 1098.0) & (original description: Putative APF2, Description = Aspartyl protease family protein 2, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf04457_271508-274598' '(at3g18490 : 159.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G25510.1); Has 4095 Blast hits to 4076 proteins in 356 species: Archae - 0; Bacteria - 4; Metazoa - 1079; Fungi - 788; Plants - 1999; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|36553 : 159.0) no description available & (reliability: 298.0) & (original description: Putative PGSC0003DMG400043757, Description = , PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf04457_404977-408473' '(at3g18490 : 155.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G25510.1); Has 4095 Blast hits to 4076 proteins in 356 species: Archae - 0; Bacteria - 4; Metazoa - 1079; Fungi - 788; Plants - 1999; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|36553 : 136.0) no description available & (reliability: 284.0) & (original description: Putative PGSC0003DMG400045930, Description = , PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf04457_425293-428681' '(at3g18490 : 152.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G25510.1); Has 4095 Blast hits to 4076 proteins in 356 species: Archae - 0; Bacteria - 4; Metazoa - 1079; Fungi - 788; Plants - 1999; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|36553 : 124.0) no description available & (reliability: 280.0) & (original description: Putative PGSC0003DMG400027447, Description = , PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf04457_451359-454985' '(gnl|cdd|36553 : 103.0) no description available & (at2g03200 : 96.7) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G01300.1); Has 2634 Blast hits to 2609 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 441; Plants - 1862; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative PGSC0003DMG400043757, Description = , PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf04457_454919-457750' '(at3g18490 : 135.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G25510.1); Has 4095 Blast hits to 4076 proteins in 356 species: Archae - 0; Bacteria - 4; Metazoa - 1079; Fungi - 788; Plants - 1999; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|36553 : 126.0) no description available & (reliability: 244.0) & (original description: Putative PGSC0003DMG400043757, Description = , PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf04514_256852-269197' '(at1g05840 : 530.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G02740.1); Has 3016 Blast hits to 2994 proteins in 298 species: Archae - 0; Bacteria - 0; Metazoa - 466; Fungi - 565; Plants - 1776; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink). & (gnl|cdd|36553 : 231.0) no description available & (q6yny7|asp1_orysa : 106.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (gnl|cdd|84452 : 92.2) no description available & (reliability: 1060.0) & (original description: Putative At1g65240, Description = Aspartic proteinase-like protein 2, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf04719_67091-70566' '(at3g20015 : 521.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G18490.1); Has 3754 Blast hits to 3736 proteins in 332 species: Archae - 0; Bacteria - 0; Metazoa - 1064; Fungi - 524; Plants - 1996; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|36553 : 246.0) no description available & (gnl|cdd|84452 : 87.2) no description available & (reliability: 1042.0) & (original description: Putative ASPG2, Description = Protein ASPARTIC PROTEASE IN GUARD CELL 2, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf05596_142081-145397' '(at1g64830 : 390.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G33340.1); Has 3478 Blast hits to 3458 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 661; Fungi - 712; Plants - 1893; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36553 : 214.0) no description available & (reliability: 780.0) & (original description: Putative CDR1, Description = Aspartic proteinase CDR1, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf06008_12876-15790' '(at1g03220 : 441.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: response to salt stress; LOCATED IN: cell wall, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G03230.1); Has 1398 Blast hits to 1391 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1396; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (p13917|7sb1_soybn : 265.0) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic 7S globulin high kDa subunit; Basic 7S globulin low kDa subunit] - Glycine max (Soybean) & (gnl|cdd|36553 : 133.0) no description available & (reliability: 882.0) & (original description: Putative NEC4, Description = Nectarin IV, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf06025_302967-313621' '(at1g05840 : 530.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G02740.1); Has 3016 Blast hits to 2994 proteins in 298 species: Archae - 0; Bacteria - 0; Metazoa - 466; Fungi - 565; Plants - 1776; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink). & (gnl|cdd|36553 : 234.0) no description available & (q6yny7|asp1_orysa : 105.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (gnl|cdd|84452 : 94.2) no description available & (reliability: 1060.0) & (original description: Putative Sb03g026140, Description = Putative uncharacterized protein Sb03g026140, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf06275_327112-330503' '(gnl|cdd|36553 : 156.0) no description available & (at3g18490 : 154.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G25510.1); Has 4095 Blast hits to 4076 proteins in 356 species: Archae - 0; Bacteria - 4; Metazoa - 1079; Fungi - 788; Plants - 1999; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative PGSC0003DMG400045930, Description = , PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf06361_885333-899954' '(at5g10080 : 482.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT4G35880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36553 : 148.0) no description available & (gnl|cdd|84452 : 89.9) no description available & (reliability: 964.0) & (original description: Putative At5g10080, Description = Aspartic proteinase-like protein 1, PFAM = PF00026)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf07054_91667-114221' '(at1g64830 : 349.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G33340.1); Has 3478 Blast hits to 3458 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 661; Fungi - 712; Plants - 1893; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36553 : 216.0) no description available & (gnl|cdd|84452 : 95.7) no description available & (reliability: 698.0) & (original description: Putative At2g35615, Description = Probable aspartic protease At2g35615, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf07054_137716-141062' '(at1g64830 : 325.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G33340.1); Has 3478 Blast hits to 3458 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 661; Fungi - 712; Plants - 1893; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36553 : 215.0) no description available & (gnl|cdd|84452 : 100.0) no description available & (reliability: 650.0) & (original description: Putative At2g28010, Description = Aspartyl protease-like protein, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf07198_19611-27199' '(at1g05840 : 473.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G02740.1); Has 3016 Blast hits to 2994 proteins in 298 species: Archae - 0; Bacteria - 0; Metazoa - 466; Fungi - 565; Plants - 1776; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink). & (gnl|cdd|36553 : 196.0) no description available & (q6yny7|asp1_orysa : 115.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (gnl|cdd|84452 : 85.3) no description available & (reliability: 946.0) & (original description: Putative At1g65240, Description = Aspartic proteinase-like protein 2, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf07325_69462-72766' '(at1g03220 : 426.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: response to salt stress; LOCATED IN: cell wall, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G03230.1); Has 1398 Blast hits to 1391 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1396; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (p13917|7sb1_soybn : 261.0) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic 7S globulin high kDa subunit; Basic 7S globulin low kDa subunit] - Glycine max (Soybean) & (gnl|cdd|36553 : 130.0) no description available & (reliability: 852.0) & (original description: Putative NEC4, Description = Xyloglucanase-specific endoglucanase inhibitor protein, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf07811_25218-34952' '(at5g10080 : 515.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT4G35880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36553 : 191.0) no description available & (gnl|cdd|84452 : 93.4) no description available & (reliability: 1030.0) & (original description: Putative At5g10080, Description = Aspartic proteinase-like protein 1, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf08709_175503-178804' '(at2g39710 : 545.0) Encodes a Cysteine-rich peptide (CRP) family protein; Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G02190.1); Has 2560 Blast hits to 2551 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 620; Fungi - 65; Plants - 1821; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|36553 : 188.0) no description available & (gnl|cdd|84452 : 83.8) no description available & (reliability: 1090.0) & (original description: Putative PCS1, Description = Aspartic proteinase PCS1, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf09928_233624-237695' '(at1g79720 : 228.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G10770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36553 : 132.0) no description available & (reliability: 456.0) & (original description: Putative cnd41, Description = Aspartic proteinase nepenthesin-1, PFAM = PF14541;PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf11444_70284-84351' '(at1g05840 : 500.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G02740.1); Has 3016 Blast hits to 2994 proteins in 298 species: Archae - 0; Bacteria - 0; Metazoa - 466; Fungi - 565; Plants - 1776; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink). & (gnl|cdd|36553 : 224.0) no description available & (q6yny7|asp1_orysa : 112.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (gnl|cdd|84452 : 98.0) no description available & (reliability: 1000.0) & (original description: Putative At1g65240, Description = Aspartic proteinase-like protein 2, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf12372_223816-237141' '(at1g05820 : 569.0) SIGNAL PEPTIDE PEPTIDASE-LIKE 5 (SPPL5); FUNCTIONS IN: peptidase activity, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22B, signal peptide peptidase (InterPro:IPR007369); BEST Arabidopsis thaliana protein match is: SIGNAL PEPTIDE PEPTIDASE-LIKE 3 (TAIR:AT2G43070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37653 : 516.0) no description available & (gnl|cdd|67855 : 280.0) no description available & (reliability: 1092.0) & (original description: Putative SPPL2, Description = Signal peptide peptidase-like 2, PFAM = PF02225;PF04258)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf12994_69504-72919' '(at1g25510 : 414.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G18490.1); Has 4139 Blast hits to 4120 proteins in 342 species: Archae - 0; Bacteria - 0; Metazoa - 1183; Fungi - 740; Plants - 2035; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|36553 : 235.0) no description available & (reliability: 828.0) & (original description: Putative nep2, Description = Aspartic proteinase nepenthesin-1, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf13571_78978-82417' '(at3g20015 : 502.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G18490.1); Has 3754 Blast hits to 3736 proteins in 332 species: Archae - 0; Bacteria - 0; Metazoa - 1064; Fungi - 524; Plants - 1996; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|36553 : 246.0) no description available & (gnl|cdd|84452 : 81.4) no description available & (reliability: 1004.0) & (original description: Putative ASPG2, Description = Protein ASPARTIC PROTEASE IN GUARD CELL 2, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf14042_63259-66578' '(at2g39710 : 540.0) Encodes a Cysteine-rich peptide (CRP) family protein; Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G02190.1); Has 2560 Blast hits to 2551 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 620; Fungi - 65; Plants - 1821; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|36553 : 192.0) no description available & (gnl|cdd|84452 : 93.8) no description available & (reliability: 1080.0) & (original description: Putative PCS1, Description = Aspartic proteinase PCS1, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf16939_12311-19094' '(at1g49050 : 521.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G44130.1); Has 2404 Blast hits to 2397 proteins in 188 species: Archae - 0; Bacteria - 0; Metazoa - 548; Fungi - 114; Plants - 1670; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (q6yny7|asp1_orysa : 253.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (gnl|cdd|36553 : 199.0) no description available & (reliability: 1042.0) & (original description: Putative APCB1, Description = Aspartyl protease APCB1, PFAM = PF14541;PF14543)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf17802_250651-258548' '(at1g11910 : 677.0) Encodes an aspartic proteinase that forms a heterodimer and is stable over a broad pH range (ph 3-8).; aspartic proteinase A1 (APA1); FUNCTIONS IN: endopeptidase activity; INVOLVED IN: proteolysis, response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Saposin-like (InterPro:IPR011001), Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138), Saposin B (InterPro:IPR008139), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Saposin-like aspartyl protease family protein (TAIR:AT1G62290.2); Has 7443 Blast hits to 5200 proteins in 420 species: Archae - 0; Bacteria - 2; Metazoa - 4134; Fungi - 1703; Plants - 675; Viruses - 0; Other Eukaryotes - 929 (source: NCBI BLink). & (q42456|aspr1_orysa : 671.0) Aspartic proteinase oryzasin-1 precursor (EC 3.4.23.-) - Oryza sativa (Rice) & (gnl|cdd|84452 : 284.0) no description available & (gnl|cdd|36553 : 197.0) no description available & (reliability: 1354.0) & (original description: Putative ap1, Description = Aspartic proteinase, PFAM = PF05184;PF00026;PF03489)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf23876_74425-77941' '(at1g64830 : 344.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G33340.1); Has 3478 Blast hits to 3458 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 661; Fungi - 712; Plants - 1893; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|36553 : 206.0) no description available & (gnl|cdd|84452 : 87.6) no description available & (reliability: 688.0) & (original description: Putative At2g35615, Description = Probable aspartic protease At2g35615, PFAM = PF14543;PF14541)' T '29.5.4' 'protein.degradation.aspartate protease' 'niben101scf34260_16526-22345' '(at4g35880 : 583.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT2G17760.1); Has 2412 Blast hits to 2405 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 331; Fungi - 271; Plants - 1693; Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink). & (gnl|cdd|36553 : 194.0) no description available & (reliability: 1166.0) & (original description: Putative APF1, Description = Aspartyl protease family protein 1, PFAM = PF14543;PF14541)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.3scaffold2242_19356-28210' '(at4g17040 : 350.0) CLP protease R subunit 4 (CLPR4); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plastid stroma, chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT1G09130.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36058 : 244.0) no description available & (gnl|cdd|84179 : 231.0) no description available & (p56317|clpp_chlvu : 98.6) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Chlorella vulgaris (Green alga) & (reliability: 700.0) & (original description: Putative CLPR4, Description = ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic, PFAM = PF00574)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.3scaffold5812_27168-34867' '(at1g15000 : 483.0) serine carboxypeptidase-like 50 (scpl50); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 47 (TAIR:AT5G22980.1); Has 3616 Blast hits to 3489 proteins in 407 species: Archae - 0; Bacteria - 288; Metazoa - 703; Fungi - 860; Plants - 1378; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink). & (gnl|cdd|84781 : 308.0) no description available & (gnl|cdd|36496 : 283.0) no description available & (p52712|cbpx_orysa : 189.0) Serine carboxypeptidase-like precursor (EC 3.4.16.-) - Oryza sativa (Rice) & (reliability: 966.0) & (original description: Putative SCPL50, Description = Serine carboxypeptidase-like 50, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.3scaffold9659_14068-24983' '(at1g33360 : 522.0) Encodes ClpX3, a subunit of the Clp protease complex.; ATP-dependent Clp protease; FUNCTIONS IN: unfolded protein binding, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), Clp protease, ATP-binding subunit ClpX (InterPro:IPR004487); BEST Arabidopsis thaliana protein match is: CLP protease regulatory subunit X (TAIR:AT5G53350.1); Has 27211 Blast hits to 23373 proteins in 3012 species: Archae - 715; Bacteria - 14972; Metazoa - 1896; Fungi - 1201; Plants - 919; Viruses - 6; Other Eukaryotes - 7502 (source: NCBI BLink). & (gnl|cdd|35964 : 459.0) no description available & (gnl|cdd|81537 : 431.0) no description available & (reliability: 1044.0) & (original description: Putative CLPX3, Description = CLP protease regulatory subunit CLPX3, mitochondrial, PFAM = PF07724)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.3scaffold9659_14501-26067' '(at1g33360 : 673.0) Encodes ClpX3, a subunit of the Clp protease complex.; ATP-dependent Clp protease; FUNCTIONS IN: unfolded protein binding, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), Clp protease, ATP-binding subunit ClpX (InterPro:IPR004487); BEST Arabidopsis thaliana protein match is: CLP protease regulatory subunit X (TAIR:AT5G53350.1); Has 27211 Blast hits to 23373 proteins in 3012 species: Archae - 715; Bacteria - 14972; Metazoa - 1896; Fungi - 1201; Plants - 919; Viruses - 6; Other Eukaryotes - 7502 (source: NCBI BLink). & (gnl|cdd|35964 : 588.0) no description available & (gnl|cdd|81537 : 543.0) no description available & (reliability: 1346.0) & (original description: Putative CLPX3, Description = CLP protease regulatory subunit CLPX3, mitochondrial, PFAM = PF07724;PF10431)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.3scaffold15601_13761-19356' '(at5g42240 : 750.0) serine carboxypeptidase-like 42 (scpl42); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 41 (TAIR:AT5G42230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36496 : 521.0) no description available & (gnl|cdd|84781 : 436.0) no description available & (p52711|cbp23_horvu : 338.0) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] - Hordeum vulgare (Barley) & (reliability: 1500.0) & (original description: Putative SCPL42, Description = Serine carboxypeptidase-like 42, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.3scaffold18337_29766-33025' '(at3g10410 : 226.0) SERINE CARBOXYPEPTIDASE-LIKE 49 (SCPL49); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 48 (TAIR:AT3G45010.1); Has 3569 Blast hits to 3439 proteins in 342 species: Archae - 0; Bacteria - 147; Metazoa - 678; Fungi - 883; Plants - 1454; Viruses - 0; Other Eukaryotes - 407 (source: NCBI BLink). & (p11515|cbp3_wheat : 221.0) Serine carboxypeptidase 3 precursor (EC 3.4.16.5) (Serine carboxypeptidase III) (CP-WIII) - Triticum aestivum (Wheat) & (gnl|cdd|84781 : 159.0) no description available & (gnl|cdd|36496 : 158.0) no description available & (reliability: 452.0) & (original description: Putative 3, Description = Carboxypeptidase, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.3scaffold23973_7368-20971' '(at2g47940 : 480.0) Encodes DegP2 protease (DEGP2); nuclear gene for chloroplast product.; DEGP protease 2 (DEGP2); FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: photosystem II repair, proteolysis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine endopeptidase DegP2 (InterPro:IPR015724), Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DegP protease 9 (TAIR:AT5G40200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36534 : 179.0) no description available & (reliability: 960.0) & (original description: Putative DEGP2, Description = Protease Do-like 9, PFAM = )' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.3scaffold26700_536-6890' '(p35100|clpc_pea : 830.0) ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor - Pisum sativum (Garden pea) & (at5g50920 : 816.0) Encodes a protein that is similar to ATP-dependent Clp protease ATP-binding subunit / ClpC. Involved in protein import into the chloroplast. May provide ATP source that drives the TIC (Translocon at the Inner envelope membrane of Chloroplasts) translocation machinery.; CLPC homologue 1 (CLPC1); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity, ATP binding; INVOLVED IN: protein import into chloroplast stroma, regulation of chlorophyll biosynthetic process, protein targeting to chloroplast, chloroplast organization; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA+ type, core (InterPro:IPR003593), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), UvrB/UvrC protein (InterPro:IPR001943), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Clp ATPase (TAIR:AT3G48870.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|79310 : 729.0) no description available & (gnl|cdd|36269 : 405.0) no description available & (reliability: 1632.0) & (original description: Putative clpA, Description = ATPase AAA-2 domain protein, PFAM = PF00004;PF07724;PF10431;PF02861;PF02861)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.3scaffold30245_17393-21755' '(p93648|lonh2_maize : 270.0) Lon protease homolog 2, mitochondrial precursor (EC 3.4.21.-) - Zea mays (Maize) & (at5g26860 : 251.0) Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins.; lon protease 1 (LON1); FUNCTIONS IN: serine-type peptidase activity, protein binding, ATP-dependent peptidase activity, ATP binding; INVOLVED IN: proteolysis; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), Peptidase S16, active site (InterPro:IPR008268), Peptidase S16, ATP-dependent protease La (InterPro:IPR004815), Peptidase S16, lon N-terminal (InterPro:IPR003111), Peptidase S16, Lon C-terminal (InterPro:IPR008269), ATPase, AAA+ type, core (InterPro:IPR003593), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: lon protease 4 (TAIR:AT3G05790.1); Has 18238 Blast hits to 18056 proteins in 2534 species: Archae - 547; Bacteria - 9804; Metazoa - 746; Fungi - 600; Plants - 445; Viruses - 7; Other Eukaryotes - 6089 (source: NCBI BLink). & (gnl|cdd|37215 : 148.0) no description available & (gnl|cdd|65930 : 88.8) no description available & (reliability: 502.0) & (original description: Putative LON1, Description = Lon protease homolog, mitochondrial, PFAM = PF02190)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.3scaffold32306_1642-14957' '(p93648|lonh2_maize : 1100.0) Lon protease homolog 2, mitochondrial precursor (EC 3.4.21.-) - Zea mays (Maize) & (at5g26860 : 1096.0) Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins.; lon protease 1 (LON1); FUNCTIONS IN: serine-type peptidase activity, protein binding, ATP-dependent peptidase activity, ATP binding; INVOLVED IN: proteolysis; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), Peptidase S16, active site (InterPro:IPR008268), Peptidase S16, ATP-dependent protease La (InterPro:IPR004815), Peptidase S16, lon N-terminal (InterPro:IPR003111), Peptidase S16, Lon C-terminal (InterPro:IPR008269), ATPase, AAA+ type, core (InterPro:IPR003593), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: lon protease 4 (TAIR:AT3G05790.1); Has 18238 Blast hits to 18056 proteins in 2534 species: Archae - 547; Bacteria - 9804; Metazoa - 746; Fungi - 600; Plants - 445; Viruses - 7; Other Eukaryotes - 6089 (source: NCBI BLink). & (gnl|cdd|37215 : 1007.0) no description available & (gnl|cdd|30814 : 557.0) no description available & (reliability: 2192.0) & (original description: Putative PIM1, Description = Lon protease homolog, mitochondrial, PFAM = PF05362;PF02190;PF00004)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.3scaffold33803_1080-21237' '(at3g03380 : 1206.0) Encodes a putative DegP protease.; DegP protease 7 (DegP7); CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03370.1); Has 8327 Blast hits to 7895 proteins in 2064 species: Archae - 65; Bacteria - 6254; Metazoa - 235; Fungi - 503; Plants - 137; Viruses - 0; Other Eukaryotes - 1133 (source: NCBI BLink). & (gnl|cdd|36635 : 451.0) no description available & (reliability: 2412.0) & (original description: Putative deg7, Description = Protease Do-like 7, PFAM = PF13180;PF12812;PF12812)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.3scaffold51525_6047-14618' '(at5g39830 : 544.0) Encodes DEG8. Forms a hexamer with DEG5 in the thylakoid lumen. Involved in the cleavage of photodamaged D2 protein of photosystem II (PSII). Recombinant DEG8 is proteolytically active toward both a model substrate (beta-casein) and photodamaged D1 protein of photosystem II.; DEG8; FUNCTIONS IN: serine-type peptidase activity, peptidase activity; INVOLVED IN: photosystem II repair, proteolysis; LOCATED IN: thylakoid, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DegP protease 1 (TAIR:AT3G27925.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36534 : 252.0) no description available & (gnl|cdd|30614 : 175.0) no description available & (reliability: 1088.0) & (original description: Putative DEGP8, Description = Protease Do-like 8, chloroplastic, PFAM = PF13365)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.3scaffold56115_6824-13095' '(at1g12410 : 423.0) Encodes a ClpP-related sequence. Though similar to ClpP proteins, this does not contains the highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).; CLP protease proteolytic subunit 2 (CLP2); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: chloroplast organization; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: plastid-encoded CLP P (TAIR:ATCG00670.1); Has 13082 Blast hits to 13064 proteins in 2999 species: Archae - 2; Bacteria - 8275; Metazoa - 145; Fungi - 81; Plants - 1076; Viruses - 67; Other Eukaryotes - 3436 (source: NCBI BLink). & (gnl|cdd|36058 : 281.0) no description available & (gnl|cdd|79637 : 237.0) no description available & (p56317|clpp_chlvu : 203.0) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Chlorella vulgaris (Green alga) & (reliability: 846.0) & (original description: Putative CLPR2, Description = ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic, PFAM = PF00574)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.3scaffold57907_730-6335' '(at2g29050 : 324.0) RHOMBOID-like 1 (RBL1); FUNCTIONS IN: serine-type endopeptidase activity; LOCATED IN: Golgi apparatus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 4 (TAIR:AT3G53780.2); Has 5724 Blast hits to 5720 proteins in 1694 species: Archae - 148; Bacteria - 3468; Metazoa - 523; Fungi - 153; Plants - 363; Viruses - 0; Other Eukaryotes - 1069 (source: NCBI BLink). & (gnl|cdd|37500 : 301.0) no description available & (gnl|cdd|85618 : 150.0) no description available & (reliability: 648.0) & (original description: Putative RBL1, Description = RHOMBOID-like protein 1, PFAM = PF01694)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.3scaffold60015_1-3169' '(at5g23140 : 359.0) One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).; nuclear-encoded CLP protease P7 (NCLPP7); FUNCTIONS IN: cobalt ion binding, zinc ion binding; INVOLVED IN: proteolysis; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP, active site (InterPro:IPR018215), Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: nuclear encoded CLP protease 5 (TAIR:AT1G02560.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80601 : 314.0) no description available & (gnl|cdd|36058 : 299.0) no description available & (p56317|clpp_chlvu : 150.0) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Chlorella vulgaris (Green alga) & (reliability: 718.0) & (original description: Putative CLPP2, Description = ATP-dependent Clp protease proteolytic subunit 2, mitochondrial, PFAM = PF00574)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.3scaffold68514_5189-9661' '(at3g45010 : 672.0) serine carboxypeptidase-like 48 (scpl48); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 47 (TAIR:AT5G22980.1); Has 3550 Blast hits to 3457 proteins in 337 species: Archae - 0; Bacteria - 135; Metazoa - 672; Fungi - 884; Plants - 1462; Viruses - 0; Other Eukaryotes - 397 (source: NCBI BLink). & (p37891|cbp3_orysa : 663.0) Serine carboxypeptidase 3 precursor (EC 3.4.16.5) (Serine carboxypeptidase III) - Oryza sativa (Rice) & (gnl|cdd|84781 : 429.0) no description available & (gnl|cdd|36496 : 382.0) no description available & (reliability: 1298.0) & (original description: Putative SCP2, Description = Carboxypeptidase, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.3scaffold88309_381-5267' '(at3g03380 : 312.0) Encodes a putative DegP protease.; DegP protease 7 (DegP7); CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03370.1); Has 8327 Blast hits to 7895 proteins in 2064 species: Archae - 65; Bacteria - 6254; Metazoa - 235; Fungi - 503; Plants - 137; Viruses - 0; Other Eukaryotes - 1133 (source: NCBI BLink). & (gnl|cdd|36635 : 245.0) no description available & (reliability: 624.0) & (original description: Putative deg7, Description = Pro-apoptotic serine protease NMA111, PFAM = PF13365)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.3scaffold102369_1-3749' '(at4g17100 : 318.0) EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endoribonuclease XendoU (InterPro:IPR018998). & (gnl|cdd|87957 : 185.0) no description available & (gnl|cdd|38060 : 162.0) no description available & (reliability: 636.0) & (original description: Putative dl4585c, Description = Poly(U)-specific endoribonuclease-B-like protein, PFAM = PF09412)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.5scaffold32_1625467-1650351' '(at5g40200 : 428.0) Encodes a putative DegP protease.; DegP protease 9 (DegP9); FUNCTIONS IN: serine-type peptidase activity, catalytic activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Serine endopeptidase DegP2 (InterPro:IPR015724), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DEGP protease 2 (TAIR:AT2G47940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36534 : 289.0) no description available & (reliability: 856.0) & (original description: Putative BnaC04g33990D, Description = BnaC04g33990D protein, PFAM = PF13180;PF13365)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.5scaffold84_526377-542007' '(at4g36195 : 657.0) Serine carboxypeptidase S28 family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Peptidase S28 (InterPro:IPR008758); BEST Arabidopsis thaliana protein match is: Serine carboxypeptidase S28 family protein (TAIR:AT4G36190.1). & (gnl|cdd|37393 : 368.0) no description available & (gnl|cdd|86891 : 233.0) no description available & (reliability: 1314.0) & (original description: Putative EDA2, Description = Serine carboxypeptidase S28 family protein, PFAM = PF05577;PF05577)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.5scaffold307_388205-392462' '(at1g15000 : 480.0) serine carboxypeptidase-like 50 (scpl50); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 47 (TAIR:AT5G22980.1); Has 3616 Blast hits to 3489 proteins in 407 species: Archae - 0; Bacteria - 288; Metazoa - 703; Fungi - 860; Plants - 1378; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink). & (gnl|cdd|84781 : 307.0) no description available & (gnl|cdd|36496 : 281.0) no description available & (p52712|cbpx_orysa : 188.0) Serine carboxypeptidase-like precursor (EC 3.4.16.-) - Oryza sativa (Rice) & (reliability: 960.0) & (original description: Putative SCPL50, Description = Carboxypeptidase, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.5scaffold545_362417-371722' '(at3g12203 : 376.0) serine carboxypeptidase-like 17 (scpl17); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 16 (TAIR:AT3G12220.1); Has 3617 Blast hits to 3541 proteins in 365 species: Archae - 0; Bacteria - 182; Metazoa - 630; Fungi - 840; Plants - 1564; Viruses - 0; Other Eukaryotes - 401 (source: NCBI BLink). & (gnl|cdd|84781 : 322.0) no description available & (gnl|cdd|36496 : 212.0) no description available & (p37890|cbp1_orysa : 159.0) Serine carboxypeptidase 1 precursor (EC 3.4.16.5) (Serine carboxypeptidase I) (Carboxypeptidase C) - Oryza sativa (Rice) & (reliability: 752.0) & (original description: Putative SCPL17, Description = Serine carboxypeptidase-like 17, PFAM = PF00450;PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.5scaffold1388_346062-424740' '(at3g10410 : 180.0) SERINE CARBOXYPEPTIDASE-LIKE 49 (SCPL49); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 48 (TAIR:AT3G45010.1); Has 3569 Blast hits to 3439 proteins in 342 species: Archae - 0; Bacteria - 147; Metazoa - 678; Fungi - 883; Plants - 1454; Viruses - 0; Other Eukaryotes - 407 (source: NCBI BLink). & (p21529|cbp3_horvu : 164.0) Serine carboxypeptidase 3 precursor (EC 3.4.16.5) (Serine carboxypeptidase III) (CP-MIII) - Hordeum vulgare (Barley) & (gnl|cdd|84781 : 103.0) no description available & (gnl|cdd|36496 : 101.0) no description available & (reliability: 360.0) & (original description: Putative 3, Description = Carboxypeptidase, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.5scaffold1875_209521-213948' '(at5g07250 : 312.0) RHOMBOID-like protein 3 (RBL3); FUNCTIONS IN: serine-type endopeptidase activity; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like 1 (TAIR:AT2G29050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37500 : 281.0) no description available & (gnl|cdd|85618 : 134.0) no description available & (reliability: 624.0) & (original description: Putative RBL6, Description = RHOMBOID-like protein 6, mitochondrial, PFAM = PF01694)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.5scaffold1924_251800-258456' '(at5g45390 : 355.0) One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).; CLP protease P4 (CLPP4); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: chloroplast organization, regulation of timing of transition from vegetative to reproductive phase; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP, active site (InterPro:IPR018215), Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: CLP protease proteolytic subunit 3 (TAIR:AT1G66670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36058 : 265.0) no description available & (gnl|cdd|79637 : 252.0) no description available & (p56317|clpp_chlvu : 162.0) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Chlorella vulgaris (Green alga) & (reliability: 710.0) & (original description: Putative clpP, Description = ATP-dependent Clp protease proteolytic subunit, PFAM = PF00574)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.5scaffold2048_364623-375355' '(at2g29050 : 390.0) RHOMBOID-like 1 (RBL1); FUNCTIONS IN: serine-type endopeptidase activity; LOCATED IN: Golgi apparatus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 4 (TAIR:AT3G53780.2); Has 5724 Blast hits to 5720 proteins in 1694 species: Archae - 148; Bacteria - 3468; Metazoa - 523; Fungi - 153; Plants - 363; Viruses - 0; Other Eukaryotes - 1069 (source: NCBI BLink). & (gnl|cdd|37500 : 314.0) no description available & (gnl|cdd|85618 : 141.0) no description available & (reliability: 780.0) & (original description: Putative RBL1, Description = RHOMBOID-like protein 1, PFAM = PF01694)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.5scaffold2266_332993-340913' '(at1g09130 : 364.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: mitochondrion, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: CLP protease proteolytic subunit 1 (TAIR:AT1G49970.1). & (gnl|cdd|36058 : 158.0) no description available & (gnl|cdd|84179 : 142.0) no description available & (p56317|clpp_chlvu : 84.0) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Chlorella vulgaris (Green alga) & (reliability: 728.0) & (original description: Putative CLPR3, Description = ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic, PFAM = PF00574)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.5scaffold3141_51713-67590' '(at5g27660 : 442.0) Trypsin family protein with PDZ domain; FUNCTIONS IN: serine-type peptidase activity, catalytic activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DegP protease 1 (TAIR:AT3G27925.1); Has 16463 Blast hits to 16423 proteins in 2614 species: Archae - 115; Bacteria - 10782; Metazoa - 377; Fungi - 151; Plants - 529; Viruses - 0; Other Eukaryotes - 4509 (source: NCBI BLink). & (gnl|cdd|36534 : 226.0) no description available & (gnl|cdd|30614 : 196.0) no description available & (reliability: 884.0) & (original description: Putative DEGP14, Description = Putative protease Do-like 14, PFAM = PF13180;PF13365)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.5scaffold3448_194230-227058' '(at3g03380 : 1568.0) Encodes a putative DegP protease.; DegP protease 7 (DegP7); CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03370.1); Has 8327 Blast hits to 7895 proteins in 2064 species: Archae - 65; Bacteria - 6254; Metazoa - 235; Fungi - 503; Plants - 137; Viruses - 0; Other Eukaryotes - 1133 (source: NCBI BLink). & (gnl|cdd|36635 : 580.0) no description available & (gnl|cdd|30614 : 82.6) no description available & (reliability: 3136.0) & (original description: Putative DEGP7, Description = Protease Do-like 7, PFAM = PF12812;PF12812;PF13365;PF13180)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.5scaffold4223_194982-201970' '(gnl|cdd|36496 : 484.0) no description available & (gnl|cdd|84781 : 462.0) no description available & (p52711|cbp23_horvu : 436.0) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] - Hordeum vulgare (Barley) & (at3g63470 : 424.0) serine carboxypeptidase-like 40 (scpl40); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 39 (TAIR:AT3G52020.1); Has 3527 Blast hits to 3467 proteins in 341 species: Archae - 0; Bacteria - 144; Metazoa - 641; Fungi - 871; Plants - 1469; Viruses - 0; Other Eukaryotes - 402 (source: NCBI BLink). & (reliability: 848.0) & (original description: Putative CXP, Description = Serine carboxypeptidase II-3, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.5scaffold5307_88980-94301' '(at3g63470 : 509.0) serine carboxypeptidase-like 40 (scpl40); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 39 (TAIR:AT3G52020.1); Has 3527 Blast hits to 3467 proteins in 341 species: Archae - 0; Bacteria - 144; Metazoa - 641; Fungi - 871; Plants - 1469; Viruses - 0; Other Eukaryotes - 402 (source: NCBI BLink). & (gnl|cdd|36496 : 480.0) no description available & (p52711|cbp23_horvu : 461.0) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] - Hordeum vulgare (Barley) & (gnl|cdd|84781 : 451.0) no description available & (reliability: 1018.0) & (original description: Putative SCPL40, Description = Serine carboxypeptidase-like 40, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.5scaffold5408_66013-77929' '(at1g33360 : 671.0) Encodes ClpX3, a subunit of the Clp protease complex.; ATP-dependent Clp protease; FUNCTIONS IN: unfolded protein binding, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), Clp protease, ATP-binding subunit ClpX (InterPro:IPR004487); BEST Arabidopsis thaliana protein match is: CLP protease regulatory subunit X (TAIR:AT5G53350.1); Has 27211 Blast hits to 23373 proteins in 3012 species: Archae - 715; Bacteria - 14972; Metazoa - 1896; Fungi - 1201; Plants - 919; Viruses - 6; Other Eukaryotes - 7502 (source: NCBI BLink). & (gnl|cdd|35964 : 588.0) no description available & (gnl|cdd|81537 : 545.0) no description available & (reliability: 1342.0) & (original description: Putative CLPX3, Description = CLP protease regulatory subunit CLPX3, mitochondrial, PFAM = PF10431;PF07724)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.5scaffold6603_58266-64853' '(p35100|clpc_pea : 962.0) ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor - Pisum sativum (Garden pea) & (at5g50920 : 938.0) Encodes a protein that is similar to ATP-dependent Clp protease ATP-binding subunit / ClpC. Involved in protein import into the chloroplast. May provide ATP source that drives the TIC (Translocon at the Inner envelope membrane of Chloroplasts) translocation machinery.; CLPC homologue 1 (CLPC1); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity, ATP binding; INVOLVED IN: protein import into chloroplast stroma, regulation of chlorophyll biosynthetic process, protein targeting to chloroplast, chloroplast organization; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA+ type, core (InterPro:IPR003593), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), UvrB/UvrC protein (InterPro:IPR001943), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Clp ATPase (TAIR:AT3G48870.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|79310 : 824.0) no description available & (gnl|cdd|36269 : 561.0) no description available & (reliability: 1876.0) & (original description: Putative clpA, Description = ATPase AAA-2 domain protein, PFAM = PF02151;PF02861;PF02861;PF10431;PF07724;PF00004)' T '29.5.5' 'protein.degradation.serine protease' 'nbv0.5scaffold7182_44889-49437' '(gnl|cdd|36496 : 396.0) no description available & (at2g33530 : 376.0) serine carboxypeptidase-like 46 (scpl46); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 45 (TAIR:AT1G28110.2); Has 3657 Blast hits to 3595 proteins in 428 species: Archae - 0; Bacteria - 306; Metazoa - 635; Fungi - 851; Plants - 1456; Viruses - 0; Other Eukaryotes - 409 (source: NCBI BLink). & (gnl|cdd|84781 : 359.0) no description available & (p55748|cbp22_horvu : 293.0) Serine carboxypeptidase II-2 precursor (EC 3.4.16.6) (CP-MII.2) [Contains: Serine carboxypeptidase II-2 chain A; Serine carboxypeptidase II-2 chain B] (Fragment) - Hordeum vulgare (Barley) & (reliability: 752.0) & (original description: Putative SCPL46, Description = Serine carboxypeptidase-like 46, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben044scf00002154ctg009_5645-12559' '(at5g45390 : 357.0) One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).; CLP protease P4 (CLPP4); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: chloroplast organization, regulation of timing of transition from vegetative to reproductive phase; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP, active site (InterPro:IPR018215), Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: CLP protease proteolytic subunit 3 (TAIR:AT1G66670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36058 : 267.0) no description available & (gnl|cdd|79637 : 253.0) no description available & (p56317|clpp_chlvu : 163.0) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Chlorella vulgaris (Green alga) & (reliability: 714.0) & (original description: Putative clpP, Description = ATP-dependent Clp protease proteolytic subunit, PFAM = PF00574)' T '29.5.5' 'protein.degradation.serine protease' 'niben044scf00003987ctg001_872-7958' '(at5g42240 : 632.0) serine carboxypeptidase-like 42 (scpl42); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 41 (TAIR:AT5G42230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36496 : 485.0) no description available & (gnl|cdd|84781 : 433.0) no description available & (p08819|cbp2_wheat : 311.0) Serine carboxypeptidase 2 (EC 3.4.16.6) (Serine carboxypeptidase II) (Carboxypeptidase D) (CPDW-II) (CP-WII) [Contains: Serine carboxypeptidase 2 chain A (Serine carboxypeptidase II chain A); Serine carboxypeptidase 2 chain B (Serine ca & (reliability: 1264.0) & (original description: Putative SCPL42, Description = Serine carboxypeptidase-like 42, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben044scf00004085ctg010_1-9876' '(at1g33360 : 697.0) Encodes ClpX3, a subunit of the Clp protease complex.; ATP-dependent Clp protease; FUNCTIONS IN: unfolded protein binding, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), Clp protease, ATP-binding subunit ClpX (InterPro:IPR004487); BEST Arabidopsis thaliana protein match is: CLP protease regulatory subunit X (TAIR:AT5G53350.1); Has 27211 Blast hits to 23373 proteins in 3012 species: Archae - 715; Bacteria - 14972; Metazoa - 1896; Fungi - 1201; Plants - 919; Viruses - 6; Other Eukaryotes - 7502 (source: NCBI BLink). & (gnl|cdd|35964 : 591.0) no description available & (gnl|cdd|81537 : 541.0) no description available & (reliability: 1394.0) & (original description: Putative CLPX3, Description = CLP protease regulatory subunit CLPX3, mitochondrial, PFAM = PF10431;PF07724)' T '29.5.5' 'protein.degradation.serine protease' 'niben044scf00004583ctg011_43830-50942' '(at2g47940 : 472.0) Encodes DegP2 protease (DEGP2); nuclear gene for chloroplast product.; DEGP protease 2 (DEGP2); FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: photosystem II repair, proteolysis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine endopeptidase DegP2 (InterPro:IPR015724), Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DegP protease 9 (TAIR:AT5G40200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36534 : 180.0) no description available & (reliability: 944.0) & (original description: Putative DEGP2, Description = Protease Do-like 9, PFAM = )' T '29.5.5' 'protein.degradation.serine protease' 'niben044scf00004792ctg019_3749-10455' '(p35100|clpc_pea : 1301.0) ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor - Pisum sativum (Garden pea) & (at5g50920 : 1276.0) Encodes a protein that is similar to ATP-dependent Clp protease ATP-binding subunit / ClpC. Involved in protein import into the chloroplast. May provide ATP source that drives the TIC (Translocon at the Inner envelope membrane of Chloroplasts) translocation machinery.; CLPC homologue 1 (CLPC1); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity, ATP binding; INVOLVED IN: protein import into chloroplast stroma, regulation of chlorophyll biosynthetic process, protein targeting to chloroplast, chloroplast organization; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA+ type, core (InterPro:IPR003593), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), UvrB/UvrC protein (InterPro:IPR001943), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Clp ATPase (TAIR:AT3G48870.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|79310 : 1125.0) no description available & (gnl|cdd|36269 : 791.0) no description available & (reliability: 2552.0) & (original description: Putative clpC, Description = ClpC, PFAM = PF02861;PF02861;PF10431;PF00004;PF07724;PF02151)' T '29.5.5' 'protein.degradation.serine protease' 'niben044scf00006039ctg002_369-2945' '(gnl|cdd|36058 : 95.8) no description available & (gnl|cdd|80601 : 90.6) no description available & (at4g17040 : 82.0) CLP protease R subunit 4 (CLPR4); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plastid stroma, chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT1G09130.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative clpP, Description = ATP-dependent Clp protease proteolytic subunit, PFAM = PF00574)' T '29.5.5' 'protein.degradation.serine protease' 'niben044scf00007702ctg016_43134-50853' '(at2g29970 : 634.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G07200.2); Has 10913 Blast hits to 10488 proteins in 2533 species: Archae - 15; Bacteria - 9122; Metazoa - 6; Fungi - 149; Plants - 525; Viruses - 0; Other Eukaryotes - 1096 (source: NCBI BLink). & (gnl|cdd|36269 : 474.0) no description available & (reliability: 1250.0) & (original description: Putative fad3a, Description = Double Clp-N motif P-loop nucleoside triphosphate hydrolase superfamily protein, PFAM = PF07724)' T '29.5.5' 'protein.degradation.serine protease' 'niben044scf00008488ctg012_14102-26356' '(at1g33360 : 691.0) Encodes ClpX3, a subunit of the Clp protease complex.; ATP-dependent Clp protease; FUNCTIONS IN: unfolded protein binding, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), Clp protease, ATP-binding subunit ClpX (InterPro:IPR004487); BEST Arabidopsis thaliana protein match is: CLP protease regulatory subunit X (TAIR:AT5G53350.1); Has 27211 Blast hits to 23373 proteins in 3012 species: Archae - 715; Bacteria - 14972; Metazoa - 1896; Fungi - 1201; Plants - 919; Viruses - 6; Other Eukaryotes - 7502 (source: NCBI BLink). & (gnl|cdd|35964 : 587.0) no description available & (gnl|cdd|81537 : 542.0) no description available & (reliability: 1382.0) & (original description: Putative clpX, Description = ATP-dependent Clp protease ATP-binding subunit ClpX, PFAM = PF10431;PF07724)' T '29.5.5' 'protein.degradation.serine protease' 'niben044scf00008717ctg000_1-2555' '(gnl|cdd|36496 : 278.0) no description available & (gnl|cdd|84781 : 258.0) no description available & (at2g33530 : 254.0) serine carboxypeptidase-like 46 (scpl46); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 45 (TAIR:AT1G28110.2); Has 3657 Blast hits to 3595 proteins in 428 species: Archae - 0; Bacteria - 306; Metazoa - 635; Fungi - 851; Plants - 1456; Viruses - 0; Other Eukaryotes - 409 (source: NCBI BLink). & (p52711|cbp23_horvu : 202.0) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] - Hordeum vulgare (Barley) & (reliability: 508.0) & (original description: Putative scp, Description = Carboxypeptidase, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben044scf00009996ctg013_23262-26992' '(at1g63120 : 224.0) AtRBL2 has been identified as a rhomboid protein involved in regulated intramembrane proteolysis (RIP). The enzyme has the proteolytic activity and substrate specificity comparable to the Drosophila Rho-1 protein.; RHOMBOID-like 2 (RBL2); CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 6 (TAIR:AT1G12750.3); Has 6856 Blast hits to 6855 proteins in 1947 species: Archae - 152; Bacteria - 4411; Metazoa - 521; Fungi - 179; Plants - 374; Viruses - 0; Other Eukaryotes - 1219 (source: NCBI BLink). & (gnl|cdd|37500 : 217.0) no description available & (gnl|cdd|85618 : 100.0) no description available & (reliability: 448.0) & (original description: Putative LOC100274505, Description = Rhomboid-like protein, PFAM = PF01694)' T '29.5.5' 'protein.degradation.serine protease' 'niben044scf00011744ctg003_22039-35106' '(p93648|lonh2_maize : 305.0) Lon protease homolog 2, mitochondrial precursor (EC 3.4.21.-) - Zea mays (Maize) & (at5g26860 : 293.0) Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins.; lon protease 1 (LON1); FUNCTIONS IN: serine-type peptidase activity, protein binding, ATP-dependent peptidase activity, ATP binding; INVOLVED IN: proteolysis; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), Peptidase S16, active site (InterPro:IPR008268), Peptidase S16, ATP-dependent protease La (InterPro:IPR004815), Peptidase S16, lon N-terminal (InterPro:IPR003111), Peptidase S16, Lon C-terminal (InterPro:IPR008269), ATPase, AAA+ type, core (InterPro:IPR003593), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: lon protease 4 (TAIR:AT3G05790.1); Has 18238 Blast hits to 18056 proteins in 2534 species: Archae - 547; Bacteria - 9804; Metazoa - 746; Fungi - 600; Plants - 445; Viruses - 7; Other Eukaryotes - 6089 (source: NCBI BLink). & (gnl|cdd|37215 : 164.0) no description available & (gnl|cdd|65930 : 90.4) no description available & (reliability: 586.0) & (original description: Putative LON1, Description = Lon protease homolog, mitochondrial, PFAM = PF02190)' T '29.5.5' 'protein.degradation.serine protease' 'niben044scf00013859ctg010_160-10455' '(at5g49840 : 567.0) ATP-dependent Clp protease; FUNCTIONS IN: unfolded protein binding, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), Clp protease, ATP-binding subunit ClpX (InterPro:IPR004487); BEST Arabidopsis thaliana protein match is: ATP-dependent Clp protease (TAIR:AT1G33360.1); Has 32248 Blast hits to 28333 proteins in 3078 species: Archae - 765; Bacteria - 18641; Metazoa - 1800; Fungi - 1278; Plants - 1157; Viruses - 4; Other Eukaryotes - 8603 (source: NCBI BLink). & (gnl|cdd|81537 : 536.0) no description available & (gnl|cdd|35964 : 529.0) no description available & (reliability: 1134.0) & (original description: Putative CLPX2, Description = CLP protease regulatory subunit CLPX2, mitochondrial, PFAM = PF10431;PF07724)' T '29.5.5' 'protein.degradation.serine protease' 'niben044scf00019205ctg003_8524-12893' '(at5g38510 : 314.0) Rhomboid-related intramembrane serine protease family protein; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 10 (TAIR:AT1G25290.2); Has 3625 Blast hits to 3625 proteins in 1267 species: Archae - 59; Bacteria - 2289; Metazoa - 237; Fungi - 114; Plants - 278; Viruses - 0; Other Eukaryotes - 648 (source: NCBI BLink). & (gnl|cdd|37500 : 148.0) no description available & (gnl|cdd|85618 : 108.0) no description available & (reliability: 628.0) & (original description: Putative RBL9, Description = RHOMBOID-like protein 9, chloroplastic, PFAM = PF01694)' T '29.5.5' 'protein.degradation.serine protease' 'niben044scf00020230ctg004_9010-12197' '(at2g40130 : 358.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-2 (InterPro:IPR013093); BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G29970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36269 : 268.0) no description available & (reliability: 706.0) & (original description: Putative fad3a, Description = Double Clp-N motif P-loop nucleoside triphosphate hydrolase superfamily protein, PFAM = )' T '29.5.5' 'protein.degradation.serine protease' 'niben044scf00020863ctg003_880-6943' '(p35100|clpc_pea : 933.0) ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor - Pisum sativum (Garden pea) & (at5g50920 : 907.0) Encodes a protein that is similar to ATP-dependent Clp protease ATP-binding subunit / ClpC. Involved in protein import into the chloroplast. May provide ATP source that drives the TIC (Translocon at the Inner envelope membrane of Chloroplasts) translocation machinery.; CLPC homologue 1 (CLPC1); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity, ATP binding; INVOLVED IN: protein import into chloroplast stroma, regulation of chlorophyll biosynthetic process, protein targeting to chloroplast, chloroplast organization; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA+ type, core (InterPro:IPR003593), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), UvrB/UvrC protein (InterPro:IPR001943), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Clp ATPase (TAIR:AT3G48870.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|79310 : 794.0) no description available & (gnl|cdd|36269 : 543.0) no description available & (reliability: 1814.0) & (original description: Putative clpA, Description = ATPase AAA-2 domain protein, PFAM = PF02861;PF02861;PF02151;PF00004)' T '29.5.5' 'protein.degradation.serine protease' 'niben044scf00027506ctg015_2018-11748' '(at5g40200 : 786.0) Encodes a putative DegP protease.; DegP protease 9 (DegP9); FUNCTIONS IN: serine-type peptidase activity, catalytic activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Serine endopeptidase DegP2 (InterPro:IPR015724), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DEGP protease 2 (TAIR:AT2G47940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36534 : 381.0) no description available & (gnl|cdd|30614 : 101.0) no description available & (reliability: 1572.0) & (original description: Putative DEGP9, Description = Protease Do-like 9, PFAM = PF13365)' T '29.5.5' 'protein.degradation.serine protease' 'niben044scf00031547ctg000_7496-15921' '(at5g40200 : 801.0) Encodes a putative DegP protease.; DegP protease 9 (DegP9); FUNCTIONS IN: serine-type peptidase activity, catalytic activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Serine endopeptidase DegP2 (InterPro:IPR015724), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DEGP protease 2 (TAIR:AT2G47940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36534 : 408.0) no description available & (gnl|cdd|30614 : 107.0) no description available & (reliability: 1602.0) & (original description: Putative DEGP9, Description = Protease Do-like 9, PFAM = PF13180;PF13365)' T '29.5.5' 'protein.degradation.serine protease' 'niben044scf00036601ctg001_1-8209' '(at5g51070 : 1189.0) ATP-dependent Clp protease regulatory subunit; EARLY RESPONSIVE TO DEHYDRATION 1 (ERD1); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: response to water deprivation; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: CLPC homologue 1 (TAIR:AT5G50920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30888 : 832.0) no description available & (p35100|clpc_pea : 707.0) ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor - Pisum sativum (Garden pea) & (gnl|cdd|36269 : 647.0) no description available & (reliability: 2378.0) & (original description: Putative CLPD, Description = Chaperone protein ClpD, chloroplastic, PFAM = PF02861;PF02861;PF07724;PF10431;PF00004)' T '29.5.5' 'protein.degradation.serine protease' 'niben044scf00047023ctg000_18621-24563' '(at1g66670 : 392.0) One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).; CLP protease proteolytic subunit 3 (CLPP3); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP, active site (InterPro:IPR018215), Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: CLP protease P4 (TAIR:AT5G45390.1); Has 13369 Blast hits to 13367 proteins in 2989 species: Archae - 6; Bacteria - 8381; Metazoa - 147; Fungi - 79; Plants - 1070; Viruses - 92; Other Eukaryotes - 3594 (source: NCBI BLink). & (gnl|cdd|36058 : 290.0) no description available & (gnl|cdd|79637 : 269.0) no description available & (p56317|clpp_chlvu : 172.0) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Chlorella vulgaris (Green alga) & (reliability: 784.0) & (original description: Putative CLPP3, Description = ATP-dependent Clp protease proteolytic subunit 3, chloroplastic, PFAM = PF00574)' T '29.5.5' 'protein.degradation.serine protease' 'niben044scf00047936ctg004_135-2509' '(at3g61980 : 89.7) serine protease inhibitor, Kazal-type family protein; FUNCTIONS IN: serine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I1, Kazal (InterPro:IPR002350); BEST Arabidopsis thaliana protein match is: serine protease inhibitor, Kazal-type family protein (TAIR:AT4G01575.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative At4g01575, Description = Serine protease inhibitor, Kazal-type family protein, PFAM = )' T '29.5.5' 'protein.degradation.serine protease' 'niben044scf00061295ctg000_847-8434' '(at5g23210 : 551.0) serine carboxypeptidase-like 34 (SCPL34); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 35 (TAIR:AT5G08260.1); Has 3216 Blast hits to 3181 proteins in 264 species: Archae - 0; Bacteria - 14; Metazoa - 612; Fungi - 819; Plants - 1476; Viruses - 0; Other Eukaryotes - 295 (source: NCBI BLink). & (gnl|cdd|36496 : 415.0) no description available & (gnl|cdd|84781 : 374.0) no description available & (p52711|cbp23_horvu : 349.0) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] - Hordeum vulgare (Barley) & (reliability: 1102.0) & (original description: Putative Sb03g013460, Description = Carboxypeptidase, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf00158_249567-268476' '(at4g36195 : 644.0) Serine carboxypeptidase S28 family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Peptidase S28 (InterPro:IPR008758); BEST Arabidopsis thaliana protein match is: Serine carboxypeptidase S28 family protein (TAIR:AT4G36190.1). & (gnl|cdd|37393 : 358.0) no description available & (gnl|cdd|86891 : 219.0) no description available & (reliability: 1288.0) & (original description: Putative EDA2, Description = Probable serine protease EDA2, PFAM = PF05577;PF05577)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf00180_693672-699642' '(at1g11080 : 659.0) serine carboxypeptidase-like 31 (scpl31); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 30 (TAIR:AT4G15100.1). & (gnl|cdd|36496 : 518.0) no description available & (gnl|cdd|84781 : 450.0) no description available & (p08818|cbp2_horvu : 410.0) Serine carboxypeptidase 2 precursor (EC 3.4.16.6) (Serine carboxypeptidase II) (Carboxypeptidase D) (CP-MII) [Contains: Serine carboxypeptidase 2 chain A (Serine carboxypeptidase II chain A); Serine carboxypeptidase 2 chain B (Serine ca & (reliability: 1318.0) & (original description: Putative SCPL31, Description = Serine carboxypeptidase-like 31, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf00199_88443-92985' '(at3g63470 : 525.0) serine carboxypeptidase-like 40 (scpl40); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 39 (TAIR:AT3G52020.1); Has 3527 Blast hits to 3467 proteins in 341 species: Archae - 0; Bacteria - 144; Metazoa - 641; Fungi - 871; Plants - 1469; Viruses - 0; Other Eukaryotes - 402 (source: NCBI BLink). & (gnl|cdd|36496 : 489.0) no description available & (p52711|cbp23_horvu : 470.0) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] - Hordeum vulgare (Barley) & (gnl|cdd|84781 : 459.0) no description available & (reliability: 1050.0) & (original description: Putative SCPL36, Description = Serine carboxypeptidase-like 36, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf00199_115862-122500' '(at3g63470 : 570.0) serine carboxypeptidase-like 40 (scpl40); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 39 (TAIR:AT3G52020.1); Has 3527 Blast hits to 3467 proteins in 341 species: Archae - 0; Bacteria - 144; Metazoa - 641; Fungi - 871; Plants - 1469; Viruses - 0; Other Eukaryotes - 402 (source: NCBI BLink). & (gnl|cdd|36496 : 500.0) no description available & (p52711|cbp23_horvu : 499.0) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] - Hordeum vulgare (Barley) & (gnl|cdd|84781 : 467.0) no description available & (reliability: 1140.0) & (original description: Putative SCPL40, Description = Serine carboxypeptidase-like 40, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf00247_571667-601542' '(at2g47940 : 892.0) Encodes DegP2 protease (DEGP2); nuclear gene for chloroplast product.; DEGP protease 2 (DEGP2); FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: photosystem II repair, proteolysis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine endopeptidase DegP2 (InterPro:IPR015724), Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DegP protease 9 (TAIR:AT5G40200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36534 : 394.0) no description available & (gnl|cdd|30614 : 133.0) no description available & (reliability: 1784.0) & (original description: Putative DEGP2, Description = Protease Do-like 2, chloroplastic, PFAM = PF13365;PF13180)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf00247_597113-601787' '(at2g47940 : 389.0) Encodes DegP2 protease (DEGP2); nuclear gene for chloroplast product.; DEGP protease 2 (DEGP2); FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: photosystem II repair, proteolysis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine endopeptidase DegP2 (InterPro:IPR015724), Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DegP protease 9 (TAIR:AT5G40200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36534 : 141.0) no description available & (reliability: 778.0) & (original description: Putative DEGP2, Description = Protease Do-like 9, PFAM = )' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf00288_930017-989738' '(at2g29970 : 620.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G07200.2); Has 10913 Blast hits to 10488 proteins in 2533 species: Archae - 15; Bacteria - 9122; Metazoa - 6; Fungi - 149; Plants - 525; Viruses - 0; Other Eukaryotes - 1096 (source: NCBI BLink). & (gnl|cdd|36269 : 461.0) no description available & (reliability: 1226.0) & (original description: Putative fad3a, Description = Double Clp-N motif P-loop nucleoside triphosphate hydrolase superfamily protein, PFAM = PF07724)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf00321_594118-604894' '(at1g11750 : 362.0) One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).; CLP protease proteolytic subunit 6 (CLPP6); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: chloroplast organization, photosynthesis; LOCATED IN: chloroplastic endopeptidase Clp complex, chloroplast stroma, chloroplast thylakoid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP, active site (InterPro:IPR018215), Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: nuclear encoded CLP protease 5 (TAIR:AT1G02560.1). & (gnl|cdd|36058 : 257.0) no description available & (gnl|cdd|79637 : 233.0) no description available & (p56317|clpp_chlvu : 130.0) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Chlorella vulgaris (Green alga) & (reliability: 724.0) & (original description: Putative CLPP6, Description = ATP-dependent Clp protease proteolytic subunit 6, chloroplastic, PFAM = PF00574)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf00332_1058458-1065058' '(at1g02560 : 476.0) One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).; nuclear encoded CLP protease 5 (CLPP5); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: peptidyl-cysteine S-nitrosylation; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP, active site (InterPro:IPR018215), Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: CLP protease proteolytic subunit 3 (TAIR:AT1G66670.1); Has 13512 Blast hits to 13510 proteins in 3028 species: Archae - 2; Bacteria - 8525; Metazoa - 147; Fungi - 82; Plants - 1082; Viruses - 85; Other Eukaryotes - 3589 (source: NCBI BLink). & (gnl|cdd|36058 : 313.0) no description available & (gnl|cdd|80601 : 301.0) no description available & (p56317|clpp_chlvu : 171.0) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Chlorella vulgaris (Green alga) & (reliability: 952.0) & (original description: Putative CLPP5, Description = ATP-dependent Clp protease proteolytic subunit 5, chloroplastic, PFAM = PF00574)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf00339_88290-96574' '(at5g40200 : 801.0) Encodes a putative DegP protease.; DegP protease 9 (DegP9); FUNCTIONS IN: serine-type peptidase activity, catalytic activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Serine endopeptidase DegP2 (InterPro:IPR015724), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DEGP protease 2 (TAIR:AT2G47940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36534 : 408.0) no description available & (gnl|cdd|30614 : 107.0) no description available & (reliability: 1602.0) & (original description: Putative DEGP9, Description = Protease Do-like 9, PFAM = PF13365;PF13180)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf00369_852577-858893' '(at1g09130 : 446.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: mitochondrion, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: CLP protease proteolytic subunit 1 (TAIR:AT1G49970.1). & (gnl|cdd|36058 : 199.0) no description available & (gnl|cdd|84179 : 199.0) no description available & (q9tl09|clpp_nepol : 99.4) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Nephroselmis olivacea & (reliability: 892.0) & (original description: Putative CLPR3, Description = ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic, PFAM = PF00574)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf00406_580461-590375' '(at3g07950 : 355.0) rhomboid protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1751, integral membrane, eukaryotic (InterPro:IPR013861); Has 573 Blast hits to 573 proteins in 252 species: Archae - 14; Bacteria - 156; Metazoa - 119; Fungi - 151; Plants - 78; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|38101 : 247.0) no description available & (gnl|cdd|71979 : 113.0) no description available & (reliability: 710.0) & (original description: Putative RBL19, Description = Rhomboid-like protein 19, PFAM = PF08551)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf00595_742942-795541' '(at4g20850 : 1861.0) Tripeptidyl Peptidase II. Ser protease that assembles into a large oligomeric complex containing two proteins of 153 and 142 kD that are derived from a single TPP2 gene, with the smaller version missing part of the C-terminal end. Not essential, based on the lack of phenotype of a T-DNA disruption mutant.; tripeptidyl peptidase ii (TPP2); FUNCTIONS IN: tripeptidyl-peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Peptidase S8A, tripeptidyl peptidase II (InterPro:IPR022229); Has 6394 Blast hits to 6195 proteins in 1270 species: Archae - 226; Bacteria - 4362; Metazoa - 666; Fungi - 272; Plants - 126; Viruses - 0; Other Eukaryotes - 742 (source: NCBI BLink). & (gnl|cdd|36330 : 1458.0) no description available & (gnl|cdd|84501 : 149.0) no description available & (reliability: 3722.0) & (original description: Putative TPP2, Description = Tripeptidyl-peptidase 2, PFAM = PF00082;PF12580)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf00614_117606-132898' '(at4g17040 : 360.0) CLP protease R subunit 4 (CLPR4); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plastid stroma, chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT1G09130.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36058 : 240.0) no description available & (gnl|cdd|84179 : 231.0) no description available & (p56317|clpp_chlvu : 98.2) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Chlorella vulgaris (Green alga) & (reliability: 720.0) & (original description: Putative CLPR4, Description = ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic, PFAM = PF00574)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf00646_999419-1006424' '(at5g42240 : 695.0) serine carboxypeptidase-like 42 (scpl42); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 41 (TAIR:AT5G42230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36496 : 503.0) no description available & (gnl|cdd|84781 : 442.0) no description available & (p52711|cbp23_horvu : 323.0) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] - Hordeum vulgare (Barley) & (reliability: 1390.0) & (original description: Putative SCPL42, Description = Serine carboxypeptidase-like 42, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf00705_643184-658638' '(at5g49840 : 606.0) ATP-dependent Clp protease; FUNCTIONS IN: unfolded protein binding, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), Clp protease, ATP-binding subunit ClpX (InterPro:IPR004487); BEST Arabidopsis thaliana protein match is: ATP-dependent Clp protease (TAIR:AT1G33360.1); Has 32248 Blast hits to 28333 proteins in 3078 species: Archae - 765; Bacteria - 18641; Metazoa - 1800; Fungi - 1278; Plants - 1157; Viruses - 4; Other Eukaryotes - 8603 (source: NCBI BLink). & (gnl|cdd|35964 : 550.0) no description available & (gnl|cdd|81537 : 537.0) no description available & (reliability: 1212.0) & (original description: Putative CLPX2, Description = CLP protease regulatory subunit CLPX2, mitochondrial, PFAM = PF07724;PF10431)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf00757_66665-73839' '(at3g02110 : 743.0) serine carboxypeptidase-like 25 (scpl25); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G30610.1); Has 3637 Blast hits to 3574 proteins in 364 species: Archae - 0; Bacteria - 191; Metazoa - 636; Fungi - 868; Plants - 1530; Viruses - 0; Other Eukaryotes - 412 (source: NCBI BLink). & (gnl|cdd|36496 : 520.0) no description available & (p08819|cbp2_wheat : 482.0) Serine carboxypeptidase 2 (EC 3.4.16.6) (Serine carboxypeptidase II) (Carboxypeptidase D) (CPDW-II) (CP-WII) [Contains: Serine carboxypeptidase 2 chain A (Serine carboxypeptidase II chain A); Serine carboxypeptidase 2 chain B (Serine ca & (gnl|cdd|84781 : 459.0) no description available & (reliability: 1486.0) & (original description: Putative SCPL25, Description = Serine carboxypeptidase-like 25, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf00759_185549-197522' '(at5g36950 : 795.0) Encodes a putative DegP protease.; DegP protease 10 (DegP10); FUNCTIONS IN: serine-type peptidase activity, catalytic activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Serine endopeptidase DegP2 (InterPro:IPR015724), Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DegP protease 3 (TAIR:AT1G65630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36534 : 453.0) no description available & (gnl|cdd|30614 : 121.0) no description available & (reliability: 1590.0) & (original description: Putative DEGP10, Description = Protease Do-like 10, mitochondrial, PFAM = PF13180;PF13365)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf01022_26177-32501' '(at3g17180 : 580.0) serine carboxypeptidase-like 33 (scpl33); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 34 (TAIR:AT5G23210.1); Has 3699 Blast hits to 3642 proteins in 416 species: Archae - 0; Bacteria - 288; Metazoa - 630; Fungi - 869; Plants - 1485; Viruses - 0; Other Eukaryotes - 427 (source: NCBI BLink). & (gnl|cdd|36496 : 496.0) no description available & (gnl|cdd|84781 : 443.0) no description available & (p08819|cbp2_wheat : 390.0) Serine carboxypeptidase 2 (EC 3.4.16.6) (Serine carboxypeptidase II) (Carboxypeptidase D) (CPDW-II) (CP-WII) [Contains: Serine carboxypeptidase 2 chain A (Serine carboxypeptidase II chain A); Serine carboxypeptidase 2 chain B (Serine ca & (reliability: 1160.0) & (original description: Putative SCPL31, Description = Serine carboxypeptidase-like 31, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf01130_55033-141551' '(at2g47940 : 914.0) Encodes DegP2 protease (DEGP2); nuclear gene for chloroplast product.; DEGP protease 2 (DEGP2); FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: photosystem II repair, proteolysis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine endopeptidase DegP2 (InterPro:IPR015724), Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DegP protease 9 (TAIR:AT5G40200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36534 : 395.0) no description available & (gnl|cdd|30614 : 133.0) no description available & (reliability: 1828.0) & (original description: Putative DEGP2, Description = Protease Do-like 2, chloroplastic, PFAM = PF13365)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf01385_86571-92360' '(gnl|cdd|36496 : 482.0) no description available & (gnl|cdd|84781 : 458.0) no description available & (at3g63470 : 410.0) serine carboxypeptidase-like 40 (scpl40); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 39 (TAIR:AT3G52020.1); Has 3527 Blast hits to 3467 proteins in 341 species: Archae - 0; Bacteria - 144; Metazoa - 641; Fungi - 871; Plants - 1469; Viruses - 0; Other Eukaryotes - 402 (source: NCBI BLink). & (p52711|cbp23_horvu : 396.0) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] - Hordeum vulgare (Barley) & (reliability: 820.0) & (original description: Putative SCPL40, Description = Serine carboxypeptidase-like 40, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf01485_63007-78990' '(at4g17100 : 499.0) EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endoribonuclease XendoU (InterPro:IPR018998). & (gnl|cdd|38060 : 271.0) no description available & (gnl|cdd|87957 : 189.0) no description available & (reliability: 998.0) & (original description: Putative endoub, Description = Poly(U)-specific endoribonuclease-B, PFAM = PF09412)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf01487_210868-214765' '(gnl|cdd|29118 : 477.0) no description available & (at1g47710 : 439.0) Serine protease inhibitor (SERPIN) family protein; FUNCTIONS IN: serine-type endopeptidase inhibitor activity, cysteine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease inhibitor I4, serpin, plant (InterPro:IPR015554), Protease inhibitor I4, serpin (InterPro:IPR000215); BEST Arabidopsis thaliana protein match is: Serine protease inhibitor (SERPIN) family protein (TAIR:AT3G45220.1); Has 6643 Blast hits to 6565 proteins in 500 species: Archae - 66; Bacteria - 387; Metazoa - 5142; Fungi - 12; Plants - 353; Viruses - 463; Other Eukaryotes - 220 (source: NCBI BLink). & (p06293|prtz_horvu : 352.0) Protein Z (Z4) (Major endosperm albumin) - Hordeum vulgare (Barley) & (gnl|cdd|37603 : 323.0) no description available & (reliability: 878.0) & (original description: Putative At1g47710, Description = Serpin-ZX, PFAM = PF00079)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf01487_215250-219641' '(gnl|cdd|29118 : 454.0) no description available & (at1g47710 : 449.0) Serine protease inhibitor (SERPIN) family protein; FUNCTIONS IN: serine-type endopeptidase inhibitor activity, cysteine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease inhibitor I4, serpin, plant (InterPro:IPR015554), Protease inhibitor I4, serpin (InterPro:IPR000215); BEST Arabidopsis thaliana protein match is: Serine protease inhibitor (SERPIN) family protein (TAIR:AT3G45220.1); Has 6643 Blast hits to 6565 proteins in 500 species: Archae - 66; Bacteria - 387; Metazoa - 5142; Fungi - 12; Plants - 353; Viruses - 463; Other Eukaryotes - 220 (source: NCBI BLink). & (p06293|prtz_horvu : 338.0) Protein Z (Z4) (Major endosperm albumin) - Hordeum vulgare (Barley) & (gnl|cdd|37603 : 313.0) no description available & (reliability: 898.0) & (original description: Putative At1g47710, Description = Serpin-ZX, PFAM = PF00079)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf01596_492039-497417' '(at1g28110 : 729.0) serine carboxypeptidase-like 45 (SCPL45); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 46 (TAIR:AT2G33530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36496 : 473.0) no description available & (gnl|cdd|84781 : 418.0) no description available & (p55748|cbp22_horvu : 343.0) Serine carboxypeptidase II-2 precursor (EC 3.4.16.6) (CP-MII.2) [Contains: Serine carboxypeptidase II-2 chain A; Serine carboxypeptidase II-2 chain B] (Fragment) - Hordeum vulgare (Barley) & (reliability: 1458.0) & (original description: Putative SCPL45, Description = Serine carboxypeptidase-like 45, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf01700_140163-147042' '(at1g49970 : 457.0) Encodes a ClpP-related sequence. Though similar to ClpP proteins, this does not contains the highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).; CLP protease proteolytic subunit 1 (CLPR1); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplastic endopeptidase Clp complex, plastid stroma, chloroplast, chloroplast stroma, chloroplast thylakoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT1G09130.2); Has 11692 Blast hits to 11690 proteins in 2932 species: Archae - 0; Bacteria - 7285; Metazoa - 144; Fungi - 71; Plants - 1058; Viruses - 0; Other Eukaryotes - 3134 (source: NCBI BLink). & (gnl|cdd|36058 : 258.0) no description available & (gnl|cdd|84179 : 199.0) no description available & (reliability: 914.0) & (original description: Putative CLPR1, Description = ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic, PFAM = PF00574)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf01727_761791-771200' '(at5g39830 : 617.0) Encodes DEG8. Forms a hexamer with DEG5 in the thylakoid lumen. Involved in the cleavage of photodamaged D2 protein of photosystem II (PSII). Recombinant DEG8 is proteolytically active toward both a model substrate (beta-casein) and photodamaged D1 protein of photosystem II.; DEG8; FUNCTIONS IN: serine-type peptidase activity, peptidase activity; INVOLVED IN: photosystem II repair, proteolysis; LOCATED IN: thylakoid, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DegP protease 1 (TAIR:AT3G27925.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36534 : 294.0) no description available & (gnl|cdd|30614 : 202.0) no description available & (reliability: 1234.0) & (original description: Putative DEGP8, Description = Protease Do-like 8, chloroplastic, PFAM = PF13365;PF13180)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf01887_385189-403145' '(gnl|cdd|36496 : 466.0) no description available & (gnl|cdd|84781 : 444.0) no description available & (at3g63470 : 354.0) serine carboxypeptidase-like 40 (scpl40); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 39 (TAIR:AT3G52020.1); Has 3527 Blast hits to 3467 proteins in 341 species: Archae - 0; Bacteria - 144; Metazoa - 641; Fungi - 871; Plants - 1469; Viruses - 0; Other Eukaryotes - 402 (source: NCBI BLink). & (p52711|cbp23_horvu : 352.0) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] - Hordeum vulgare (Barley) & (reliability: 708.0) & (original description: Putative BRS1, Description = Carboxypeptidase, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf01985_240832-275943' '(at2g47940 : 907.0) Encodes DegP2 protease (DEGP2); nuclear gene for chloroplast product.; DEGP protease 2 (DEGP2); FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: photosystem II repair, proteolysis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine endopeptidase DegP2 (InterPro:IPR015724), Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DegP protease 9 (TAIR:AT5G40200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36534 : 393.0) no description available & (gnl|cdd|30614 : 131.0) no description available & (reliability: 1814.0) & (original description: Putative deg2, Description = Protease Do-like 9, PFAM = PF13365)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf02034_263998-271339' '(at2g29970 : 620.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G07200.2); Has 10913 Blast hits to 10488 proteins in 2533 species: Archae - 15; Bacteria - 9122; Metazoa - 6; Fungi - 149; Plants - 525; Viruses - 0; Other Eukaryotes - 1096 (source: NCBI BLink). & (gnl|cdd|36269 : 463.0) no description available & (reliability: 1240.0) & (original description: Putative fad3a, Description = AtD53-like 3, PFAM = PF07724)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf02354_555658-564853' '(at5g25752 : 345.0) Chloroplast-localized rhomboid-like protein.; rhomboid-like protein 11 (RBL11); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: Rhomboid-related intramembrane serine protease family protein (TAIR:AT5G25640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85618 : 82.6) no description available & (reliability: 690.0) & (original description: Putative RBL11, Description = Rhomboid-like protein 11, chloroplastic, PFAM = PF01694)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf02358_232332-240004' '(at3g07990 : 721.0) serine carboxypeptidase-like 27 (SCPL27); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 26 (TAIR:AT2G35780.1); Has 3547 Blast hits to 3487 proteins in 342 species: Archae - 0; Bacteria - 132; Metazoa - 639; Fungi - 851; Plants - 1534; Viruses - 0; Other Eukaryotes - 391 (source: NCBI BLink). & (p08819|cbp2_wheat : 565.0) Serine carboxypeptidase 2 (EC 3.4.16.6) (Serine carboxypeptidase II) (Carboxypeptidase D) (CPDW-II) (CP-WII) [Contains: Serine carboxypeptidase 2 chain A (Serine carboxypeptidase II chain A); Serine carboxypeptidase 2 chain B (Serine ca & (gnl|cdd|36496 : 542.0) no description available & (gnl|cdd|84781 : 497.0) no description available & (reliability: 1442.0) & (original description: Putative SCPL27, Description = Serine carboxypeptidase-like 27, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf02359_57311-68238' '(p55748|cbp22_horvu : 636.0) Serine carboxypeptidase II-2 precursor (EC 3.4.16.6) (CP-MII.2) [Contains: Serine carboxypeptidase II-2 chain A; Serine carboxypeptidase II-2 chain B] (Fragment) - Hordeum vulgare (Barley) & (at4g30810 : 619.0) serine carboxypeptidase-like 29 (scpl29); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 26 (TAIR:AT2G35780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36496 : 517.0) no description available & (gnl|cdd|84781 : 487.0) no description available & (reliability: 1238.0) & (original description: Putative CXP, Description = Serine carboxypeptidase II-2, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf02360_331801-342977' '(at5g53350 : 696.0) CLP protease regulatory subunit CLPX mRNA, nuclear gene; CLP protease regulatory subunit X (CLPX); FUNCTIONS IN: unfolded protein binding, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), Clp protease, ATP-binding subunit ClpX (InterPro:IPR004487); BEST Arabidopsis thaliana protein match is: ATP-dependent Clp protease (TAIR:AT1G33360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35964 : 590.0) no description available & (gnl|cdd|81537 : 546.0) no description available & (reliability: 1392.0) & (original description: Putative CLPX1, Description = CLP protease regulatory subunit CLPX1, mitochondrial, PFAM = PF10431;PF07724)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf02422_115470-117856' '(at1g47710 : 113.0) Serine protease inhibitor (SERPIN) family protein; FUNCTIONS IN: serine-type endopeptidase inhibitor activity, cysteine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease inhibitor I4, serpin, plant (InterPro:IPR015554), Protease inhibitor I4, serpin (InterPro:IPR000215); BEST Arabidopsis thaliana protein match is: Serine protease inhibitor (SERPIN) family protein (TAIR:AT3G45220.1); Has 6643 Blast hits to 6565 proteins in 500 species: Archae - 66; Bacteria - 387; Metazoa - 5142; Fungi - 12; Plants - 353; Viruses - 463; Other Eukaryotes - 220 (source: NCBI BLink). & (gnl|cdd|29118 : 105.0) no description available & (reliability: 226.0) & (original description: Putative At1g47710, Description = Serpin-ZX-like protein, PFAM = PF00079)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf02422_180034-198852' '(gnl|cdd|29118 : 287.0) no description available & (at1g47710 : 281.0) Serine protease inhibitor (SERPIN) family protein; FUNCTIONS IN: serine-type endopeptidase inhibitor activity, cysteine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease inhibitor I4, serpin, plant (InterPro:IPR015554), Protease inhibitor I4, serpin (InterPro:IPR000215); BEST Arabidopsis thaliana protein match is: Serine protease inhibitor (SERPIN) family protein (TAIR:AT3G45220.1); Has 6643 Blast hits to 6565 proteins in 500 species: Archae - 66; Bacteria - 387; Metazoa - 5142; Fungi - 12; Plants - 353; Viruses - 463; Other Eukaryotes - 220 (source: NCBI BLink). & (gnl|cdd|37603 : 202.0) no description available & (p06293|prtz_horvu : 198.0) Protein Z (Z4) (Major endosperm albumin) - Hordeum vulgare (Barley) & (reliability: 562.0) & (original description: Putative PAZ1, Description = Serpin-like protein, PFAM = PF00079)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf02422_255920-260203' '(gnl|cdd|29118 : 491.0) no description available & (at1g47710 : 471.0) Serine protease inhibitor (SERPIN) family protein; FUNCTIONS IN: serine-type endopeptidase inhibitor activity, cysteine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease inhibitor I4, serpin, plant (InterPro:IPR015554), Protease inhibitor I4, serpin (InterPro:IPR000215); BEST Arabidopsis thaliana protein match is: Serine protease inhibitor (SERPIN) family protein (TAIR:AT3G45220.1); Has 6643 Blast hits to 6565 proteins in 500 species: Archae - 66; Bacteria - 387; Metazoa - 5142; Fungi - 12; Plants - 353; Viruses - 463; Other Eukaryotes - 220 (source: NCBI BLink). & (p06293|prtz_horvu : 366.0) Protein Z (Z4) (Major endosperm albumin) - Hordeum vulgare (Barley) & (gnl|cdd|37603 : 328.0) no description available & (reliability: 942.0) & (original description: Putative At2g25240, Description = Serpin-Z10, PFAM = PF00079)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf02459_1234-78201' '(at1g33360 : 529.0) Encodes ClpX3, a subunit of the Clp protease complex.; ATP-dependent Clp protease; FUNCTIONS IN: unfolded protein binding, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), Clp protease, ATP-binding subunit ClpX (InterPro:IPR004487); BEST Arabidopsis thaliana protein match is: CLP protease regulatory subunit X (TAIR:AT5G53350.1); Has 27211 Blast hits to 23373 proteins in 3012 species: Archae - 715; Bacteria - 14972; Metazoa - 1896; Fungi - 1201; Plants - 919; Viruses - 6; Other Eukaryotes - 7502 (source: NCBI BLink). & (gnl|cdd|35964 : 463.0) no description available & (gnl|cdd|81537 : 429.0) no description available & (reliability: 1058.0) & (original description: Putative clpX, Description = ATP-dependent Clp protease ATP-binding subunit ClpX, PFAM = PF07724)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf02459_68032-78249' '(at1g33360 : 680.0) Encodes ClpX3, a subunit of the Clp protease complex.; ATP-dependent Clp protease; FUNCTIONS IN: unfolded protein binding, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), Clp protease, ATP-binding subunit ClpX (InterPro:IPR004487); BEST Arabidopsis thaliana protein match is: CLP protease regulatory subunit X (TAIR:AT5G53350.1); Has 27211 Blast hits to 23373 proteins in 3012 species: Archae - 715; Bacteria - 14972; Metazoa - 1896; Fungi - 1201; Plants - 919; Viruses - 6; Other Eukaryotes - 7502 (source: NCBI BLink). & (gnl|cdd|35964 : 593.0) no description available & (gnl|cdd|81537 : 543.0) no description available & (reliability: 1360.0) & (original description: Putative CLPX2, Description = CLP protease regulatory subunit CLPX2, mitochondrial, PFAM = PF10431;PF07724)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf02508_90028-98434' '(at4g17740 : 635.0) Peptidase S41 family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis, intracellular signaling pathway; LOCATED IN: thylakoid, thylakoid lumen, mitochondrion, chloroplast thylakoid lumen; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S41 (InterPro:IPR005151), PDZ/DHR/GLGF (InterPro:IPR001478), Peptidase S41A, C-terminal peptidase (InterPro:IPR004447); BEST Arabidopsis thaliana protein match is: Peptidase S41 family protein (TAIR:AT3G57680.1); Has 9160 Blast hits to 9150 proteins in 1973 species: Archae - 0; Bacteria - 5658; Metazoa - 14; Fungi - 0; Plants - 153; Viruses - 0; Other Eukaryotes - 3335 (source: NCBI BLink). & (gnl|cdd|31136 : 292.0) no description available & (reliability: 1270.0) & (original description: Putative CTPA2, Description = Carboxyl-terminal-processing peptidase 2, chloroplastic, PFAM = PF00595;PF03572)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf02652_248936-282211' '(at1g12410 : 305.0) Encodes a ClpP-related sequence. Though similar to ClpP proteins, this does not contains the highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).; CLP protease proteolytic subunit 2 (CLP2); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: chloroplast organization; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: plastid-encoded CLP P (TAIR:ATCG00670.1); Has 13082 Blast hits to 13064 proteins in 2999 species: Archae - 2; Bacteria - 8275; Metazoa - 145; Fungi - 81; Plants - 1076; Viruses - 67; Other Eukaryotes - 3436 (source: NCBI BLink). & (gnl|cdd|36058 : 228.0) no description available & (gnl|cdd|79246 : 192.0) no description available & (p56317|clpp_chlvu : 172.0) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Chlorella vulgaris (Green alga) & (reliability: 610.0) & (original description: Putative clpP, Description = ATP-dependent Clp protease proteolytic subunit, PFAM = PF00574)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf02772_396684-406938' '(at5g38510 : 251.0) Rhomboid-related intramembrane serine protease family protein; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 10 (TAIR:AT1G25290.2); Has 3625 Blast hits to 3625 proteins in 1267 species: Archae - 59; Bacteria - 2289; Metazoa - 237; Fungi - 114; Plants - 278; Viruses - 0; Other Eukaryotes - 648 (source: NCBI BLink). & (gnl|cdd|37500 : 125.0) no description available & (gnl|cdd|85618 : 90.7) no description available & (reliability: 502.0) & (original description: Putative PGSC0003DMG400012677, Description = Rhomboid-like protein, PFAM = PF01694)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf02803_446964-454042' '(at3g10410 : 733.0) SERINE CARBOXYPEPTIDASE-LIKE 49 (SCPL49); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 48 (TAIR:AT3G45010.1); Has 3569 Blast hits to 3439 proteins in 342 species: Archae - 0; Bacteria - 147; Metazoa - 678; Fungi - 883; Plants - 1454; Viruses - 0; Other Eukaryotes - 407 (source: NCBI BLink). & (p37891|cbp3_orysa : 704.0) Serine carboxypeptidase 3 precursor (EC 3.4.16.5) (Serine carboxypeptidase III) - Oryza sativa (Rice) & (gnl|cdd|84781 : 439.0) no description available & (gnl|cdd|36496 : 388.0) no description available & (reliability: 1466.0) & (original description: Putative SCPL49, Description = Serine carboxypeptidase-like 49, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf02828_482890-489893' '(at1g66670 : 393.0) One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).; CLP protease proteolytic subunit 3 (CLPP3); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP, active site (InterPro:IPR018215), Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: CLP protease P4 (TAIR:AT5G45390.1); Has 13369 Blast hits to 13367 proteins in 2989 species: Archae - 6; Bacteria - 8381; Metazoa - 147; Fungi - 79; Plants - 1070; Viruses - 92; Other Eukaryotes - 3594 (source: NCBI BLink). & (gnl|cdd|36058 : 281.0) no description available & (gnl|cdd|79637 : 264.0) no description available & (p56317|clpp_chlvu : 170.0) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Chlorella vulgaris (Green alga) & (reliability: 786.0) & (original description: Putative CLPP3, Description = ATP-dependent Clp protease proteolytic subunit 3, chloroplastic, PFAM = PF00574)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf02936_515560-522062' '(at2g23000 : 491.0) serine carboxypeptidase-like 10 (scpl10); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 9 (TAIR:AT2G23010.1); Has 3984 Blast hits to 3884 proteins in 449 species: Archae - 0; Bacteria - 475; Metazoa - 640; Fungi - 843; Plants - 1573; Viruses - 0; Other Eukaryotes - 453 (source: NCBI BLink). & (gnl|cdd|36496 : 453.0) no description available & (gnl|cdd|84781 : 419.0) no description available & (p07519|cbp1_horvu : 342.0) Serine carboxypeptidase 1 precursor (EC 3.4.16.5) (Serine carboxypeptidase I) (Carboxypeptidase C) (CP-MI) [Contains: Serine carboxypeptidase 1 chain A (Serine carboxypeptidase I chain A); Serine carboxypeptidase 1 chain B (Serine carbo & (reliability: 982.0) & (original description: Putative SCPL18, Description = Serine carboxypeptidase-like 18, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf03015_841460-881652' '(at3g03380 : 1590.0) Encodes a putative DegP protease.; DegP protease 7 (DegP7); CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03370.1); Has 8327 Blast hits to 7895 proteins in 2064 species: Archae - 65; Bacteria - 6254; Metazoa - 235; Fungi - 503; Plants - 137; Viruses - 0; Other Eukaryotes - 1133 (source: NCBI BLink). & (gnl|cdd|36635 : 599.0) no description available & (gnl|cdd|30614 : 94.1) no description available & (reliability: 3180.0) & (original description: Putative DEGP7, Description = Protease Do-like 7, PFAM = PF13365;PF13180;PF12812;PF12812)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf03595_823746-834084' '(at5g23210 : 675.0) serine carboxypeptidase-like 34 (SCPL34); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 35 (TAIR:AT5G08260.1); Has 3216 Blast hits to 3181 proteins in 264 species: Archae - 0; Bacteria - 14; Metazoa - 612; Fungi - 819; Plants - 1476; Viruses - 0; Other Eukaryotes - 295 (source: NCBI BLink). & (gnl|cdd|36496 : 537.0) no description available & (gnl|cdd|84781 : 478.0) no description available & (p52711|cbp23_horvu : 443.0) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] - Hordeum vulgare (Barley) & (reliability: 1350.0) & (original description: Putative SCPL34, Description = Serine carboxypeptidase-like 34, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf03768_321693-324082' '(at3g61980 : 81.3) serine protease inhibitor, Kazal-type family protein; FUNCTIONS IN: serine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I1, Kazal (InterPro:IPR002350); BEST Arabidopsis thaliana protein match is: serine protease inhibitor, Kazal-type family protein (TAIR:AT4G01575.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative At4g01575, Description = Serine protease inhibitor, Kazal-type family protein, PFAM = )' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf03939_493217-509896' '(at5g40200 : 799.0) Encodes a putative DegP protease.; DegP protease 9 (DegP9); FUNCTIONS IN: serine-type peptidase activity, catalytic activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Serine endopeptidase DegP2 (InterPro:IPR015724), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DEGP protease 2 (TAIR:AT2G47940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36534 : 389.0) no description available & (gnl|cdd|30614 : 102.0) no description available & (reliability: 1598.0) & (original description: Putative DEGP9, Description = Protease Do-like 9, PFAM = PF13365)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf03986_282481-284900' '(at4g01575 : 89.0) serine protease inhibitor, Kazal-type family protein; FUNCTIONS IN: serine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: serine protease inhibitor, Kazal-type family protein (TAIR:AT3G61980.1); Has 54 Blast hits to 54 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative At3g61980, Description = Putative ovule protein, PFAM = )' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf04096_1169563-1173990' '(at5g07250 : 331.0) RHOMBOID-like protein 3 (RBL3); FUNCTIONS IN: serine-type endopeptidase activity; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like 1 (TAIR:AT2G29050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37500 : 315.0) no description available & (gnl|cdd|85618 : 136.0) no description available & (reliability: 662.0) & (original description: Putative RBL2, Description = RHOMBOID-like protein 2, PFAM = PF01694)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf04473_748861-767155' '(at1g02560 : 464.0) One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).; nuclear encoded CLP protease 5 (CLPP5); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: peptidyl-cysteine S-nitrosylation; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP, active site (InterPro:IPR018215), Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: CLP protease proteolytic subunit 3 (TAIR:AT1G66670.1); Has 13512 Blast hits to 13510 proteins in 3028 species: Archae - 2; Bacteria - 8525; Metazoa - 147; Fungi - 82; Plants - 1082; Viruses - 85; Other Eukaryotes - 3589 (source: NCBI BLink). & (gnl|cdd|36058 : 309.0) no description available & (gnl|cdd|80601 : 298.0) no description available & (p56317|clpp_chlvu : 171.0) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Chlorella vulgaris (Green alga) & (reliability: 928.0) & (original description: Putative CLPP5, Description = ATP-dependent Clp protease proteolytic subunit 5, chloroplastic, PFAM = PF00574)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf04716_149488-159865' '(at1g18600 : 259.0) Mitochondrion-located rhomboid-like protein; RHOMBOID-like protein 12 (RBL12); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: Rhomboid-related intramembrane serine protease family protein (TAIR:AT1G74130.1); Has 3270 Blast hits to 3270 proteins in 960 species: Archae - 107; Bacteria - 1998; Metazoa - 110; Fungi - 132; Plants - 58; Viruses - 0; Other Eukaryotes - 865 (source: NCBI BLink). & (gnl|cdd|38191 : 111.0) no description available & (reliability: 518.0) & (original description: Putative RBL12, Description = RHOMBOID-like protein 12, mitochondrial, PFAM = PF01694)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf05056_314569-321297' '(at1g63120 : 304.0) AtRBL2 has been identified as a rhomboid protein involved in regulated intramembrane proteolysis (RIP). The enzyme has the proteolytic activity and substrate specificity comparable to the Drosophila Rho-1 protein.; RHOMBOID-like 2 (RBL2); CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 6 (TAIR:AT1G12750.3); Has 6856 Blast hits to 6855 proteins in 1947 species: Archae - 152; Bacteria - 4411; Metazoa - 521; Fungi - 179; Plants - 374; Viruses - 0; Other Eukaryotes - 1219 (source: NCBI BLink). & (gnl|cdd|37500 : 241.0) no description available & (gnl|cdd|85618 : 101.0) no description available & (reliability: 608.0) & (original description: Putative RBL1, Description = Rhomboid-like protein, PFAM = PF01694;PF01694)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf05211_349786-357034' '(at1g12410 : 424.0) Encodes a ClpP-related sequence. Though similar to ClpP proteins, this does not contains the highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).; CLP protease proteolytic subunit 2 (CLP2); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: chloroplast organization; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: plastid-encoded CLP P (TAIR:ATCG00670.1); Has 13082 Blast hits to 13064 proteins in 2999 species: Archae - 2; Bacteria - 8275; Metazoa - 145; Fungi - 81; Plants - 1076; Viruses - 67; Other Eukaryotes - 3436 (source: NCBI BLink). & (gnl|cdd|36058 : 284.0) no description available & (gnl|cdd|79637 : 234.0) no description available & (p56317|clpp_chlvu : 202.0) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Chlorella vulgaris (Green alga) & (reliability: 848.0) & (original description: Putative clpP, Description = ATP-dependent Clp protease proteolytic subunit, PFAM = PF00574)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf05349_173966-187208' '(at1g33360 : 681.0) Encodes ClpX3, a subunit of the Clp protease complex.; ATP-dependent Clp protease; FUNCTIONS IN: unfolded protein binding, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), Clp protease, ATP-binding subunit ClpX (InterPro:IPR004487); BEST Arabidopsis thaliana protein match is: CLP protease regulatory subunit X (TAIR:AT5G53350.1); Has 27211 Blast hits to 23373 proteins in 3012 species: Archae - 715; Bacteria - 14972; Metazoa - 1896; Fungi - 1201; Plants - 919; Viruses - 6; Other Eukaryotes - 7502 (source: NCBI BLink). & (gnl|cdd|35964 : 587.0) no description available & (gnl|cdd|81537 : 544.0) no description available & (reliability: 1362.0) & (original description: Putative CLPX3, Description = CLP protease regulatory subunit CLPX3, mitochondrial, PFAM = PF07724;PF10431)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf05363_427254-430362' '(gnl|cdd|29118 : 140.0) no description available & (gnl|cdd|37603 : 117.0) no description available & (at1g47710 : 115.0) Serine protease inhibitor (SERPIN) family protein; FUNCTIONS IN: serine-type endopeptidase inhibitor activity, cysteine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease inhibitor I4, serpin, plant (InterPro:IPR015554), Protease inhibitor I4, serpin (InterPro:IPR000215); BEST Arabidopsis thaliana protein match is: Serine protease inhibitor (SERPIN) family protein (TAIR:AT3G45220.1); Has 6643 Blast hits to 6565 proteins in 500 species: Archae - 66; Bacteria - 387; Metazoa - 5142; Fungi - 12; Plants - 353; Viruses - 463; Other Eukaryotes - 220 (source: NCBI BLink). & (p06293|prtz_horvu : 92.0) Protein Z (Z4) (Major endosperm albumin) - Hordeum vulgare (Barley) & (reliability: 230.0) & (original description: Putative ps-1, Description = Serpin-like protein, PFAM = PF00079)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf05486_161058-164410' '(at1g15000 : 481.0) serine carboxypeptidase-like 50 (scpl50); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 47 (TAIR:AT5G22980.1); Has 3616 Blast hits to 3489 proteins in 407 species: Archae - 0; Bacteria - 288; Metazoa - 703; Fungi - 860; Plants - 1378; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink). & (gnl|cdd|84781 : 308.0) no description available & (gnl|cdd|36496 : 283.0) no description available & (p52712|cbpx_orysa : 189.0) Serine carboxypeptidase-like precursor (EC 3.4.16.-) - Oryza sativa (Rice) & (reliability: 962.0) & (original description: Putative SCPL50, Description = Serine carboxypeptidase-like 50, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf05804_521236-529257' '(at3g53270 : 228.0) Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small nuclear RNA activating complex (SNAPc), subunit SNAP43 (InterPro:IPR019188). & (reliability: 456.0) & (original description: Putative At3g53270, Description = Putative uncharacterized protein At3g53270, PFAM = PF09808)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf05804_523897-528946' '(at3g53270 : 143.0) Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small nuclear RNA activating complex (SNAPc), subunit SNAP43 (InterPro:IPR019188). & (reliability: 286.0) & (original description: Putative At3g53270, Description = Putative uncharacterized protein At3g53270, PFAM = PF09808)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf05811_810607-816362' '(at2g29050 : 308.0) RHOMBOID-like 1 (RBL1); FUNCTIONS IN: serine-type endopeptidase activity; LOCATED IN: Golgi apparatus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 4 (TAIR:AT3G53780.2); Has 5724 Blast hits to 5720 proteins in 1694 species: Archae - 148; Bacteria - 3468; Metazoa - 523; Fungi - 153; Plants - 363; Viruses - 0; Other Eukaryotes - 1069 (source: NCBI BLink). & (gnl|cdd|37500 : 298.0) no description available & (gnl|cdd|85618 : 147.0) no description available & (reliability: 616.0) & (original description: Putative RBL1, Description = RHOMBOID-like protein 1, PFAM = PF01694)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf05912_177497-185896' '(p35100|clpc_pea : 1400.0) ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor - Pisum sativum (Garden pea) & (at5g50920 : 1373.0) Encodes a protein that is similar to ATP-dependent Clp protease ATP-binding subunit / ClpC. Involved in protein import into the chloroplast. May provide ATP source that drives the TIC (Translocon at the Inner envelope membrane of Chloroplasts) translocation machinery.; CLPC homologue 1 (CLPC1); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity, ATP binding; INVOLVED IN: protein import into chloroplast stroma, regulation of chlorophyll biosynthetic process, protein targeting to chloroplast, chloroplast organization; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA+ type, core (InterPro:IPR003593), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), UvrB/UvrC protein (InterPro:IPR001943), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Clp ATPase (TAIR:AT3G48870.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|79310 : 1205.0) no description available & (gnl|cdd|36269 : 829.0) no description available & (reliability: 2746.0) & (original description: Putative clpA, Description = ATPase AAA-2 domain protein, PFAM = PF02861;PF02861;PF02151;PF10431;PF07724;PF00004)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf05961_189910-197489' '(at4g12910 : 703.0) serine carboxypeptidase-like 20 (scpl20); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 21 (TAIR:AT3G25420.1); Has 4118 Blast hits to 3857 proteins in 425 species: Archae - 0; Bacteria - 294; Metazoa - 699; Fungi - 932; Plants - 1620; Viruses - 0; Other Eukaryotes - 573 (source: NCBI BLink). & (p07519|cbp1_horvu : 696.0) Serine carboxypeptidase 1 precursor (EC 3.4.16.5) (Serine carboxypeptidase I) (Carboxypeptidase C) (CP-MI) [Contains: Serine carboxypeptidase 1 chain A (Serine carboxypeptidase I chain A); Serine carboxypeptidase 1 chain B (Serine carbo & (gnl|cdd|84781 : 468.0) no description available & (gnl|cdd|36496 : 462.0) no description available & (reliability: 1406.0) & (original description: Putative CBP1, Description = Serine carboxypeptidase 1, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf06203_187389-199492' '(at1g11750 : 358.0) One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).; CLP protease proteolytic subunit 6 (CLPP6); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: chloroplast organization, photosynthesis; LOCATED IN: chloroplastic endopeptidase Clp complex, chloroplast stroma, chloroplast thylakoid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP, active site (InterPro:IPR018215), Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: nuclear encoded CLP protease 5 (TAIR:AT1G02560.1). & (gnl|cdd|36058 : 254.0) no description available & (gnl|cdd|79637 : 233.0) no description available & (p56317|clpp_chlvu : 130.0) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Chlorella vulgaris (Green alga) & (reliability: 716.0) & (original description: Putative CLPP6, Description = ATP-dependent Clp protease proteolytic subunit 6, chloroplastic, PFAM = PF00574)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf06342_293686-298885' '(p37891|cbp3_orysa : 706.0) Serine carboxypeptidase 3 precursor (EC 3.4.16.5) (Serine carboxypeptidase III) - Oryza sativa (Rice) & (at3g45010 : 703.0) serine carboxypeptidase-like 48 (scpl48); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 47 (TAIR:AT5G22980.1); Has 3550 Blast hits to 3457 proteins in 337 species: Archae - 0; Bacteria - 135; Metazoa - 672; Fungi - 884; Plants - 1462; Viruses - 0; Other Eukaryotes - 397 (source: NCBI BLink). & (gnl|cdd|84781 : 429.0) no description available & (gnl|cdd|36496 : 382.0) no description available & (reliability: 1358.0) & (original description: Putative SCPL48, Description = Serine carboxypeptidase-like 48, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf06349_38763-44766' '(at3g27925 : 610.0) Encodes a DegP protease; nuclear gene encoding chloroplast-targeted protease that can degrade two lumenal proteins, plastocyanin and OE33, suggesting a role as a general-purpose protease in the thylakoid lumen. Involved in the degradation of D1 protein of PS II, hence participating in the repair of PS II damages caused by photoinhibition.; DegP protease 1 (DEGP1); FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: photosystem II repair, proteolysis, protein catabolic process; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: Trypsin family protein with PDZ domain (TAIR:AT5G39830.1); Has 16838 Blast hits to 16778 proteins in 2643 species: Archae - 108; Bacteria - 11023; Metazoa - 354; Fungi - 149; Plants - 421; Viruses - 7; Other Eukaryotes - 4776 (source: NCBI BLink). & (gnl|cdd|30614 : 240.0) no description available & (gnl|cdd|36534 : 205.0) no description available & (reliability: 1220.0) & (original description: Putative DEGP1, Description = Protease Do-like 1, chloroplastic, PFAM = PF13365;PF13180)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf06358_7418-15073' '(at5g42240 : 750.0) serine carboxypeptidase-like 42 (scpl42); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 41 (TAIR:AT5G42230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36496 : 512.0) no description available & (gnl|cdd|84781 : 434.0) no description available & (p52711|cbp23_horvu : 331.0) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] - Hordeum vulgare (Barley) & (reliability: 1500.0) & (original description: Putative SCPL42, Description = Serine carboxypeptidase-like 42, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf06382_218484-223523' '(at5g23140 : 348.0) One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).; nuclear-encoded CLP protease P7 (NCLPP7); FUNCTIONS IN: cobalt ion binding, zinc ion binding; INVOLVED IN: proteolysis; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP, active site (InterPro:IPR018215), Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: nuclear encoded CLP protease 5 (TAIR:AT1G02560.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80601 : 310.0) no description available & (gnl|cdd|36058 : 303.0) no description available & (q85fj8|clpp_adica : 144.0) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Adiantum capillus-veneris (Maidenhair fern) & (reliability: 696.0) & (original description: Putative clpP, Description = ATP-dependent Clp protease proteolytic subunit, PFAM = PF00574)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf06482_104035-112863' '(at2g29050 : 379.0) RHOMBOID-like 1 (RBL1); FUNCTIONS IN: serine-type endopeptidase activity; LOCATED IN: Golgi apparatus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 4 (TAIR:AT3G53780.2); Has 5724 Blast hits to 5720 proteins in 1694 species: Archae - 148; Bacteria - 3468; Metazoa - 523; Fungi - 153; Plants - 363; Viruses - 0; Other Eukaryotes - 1069 (source: NCBI BLink). & (gnl|cdd|37500 : 312.0) no description available & (gnl|cdd|85618 : 140.0) no description available & (reliability: 758.0) & (original description: Putative RBL1, Description = RHOMBOID-like protein 1, PFAM = PF01694)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf06613_28946-48584' '(at5g27660 : 449.0) Trypsin family protein with PDZ domain; FUNCTIONS IN: serine-type peptidase activity, catalytic activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DegP protease 1 (TAIR:AT3G27925.1); Has 16463 Blast hits to 16423 proteins in 2614 species: Archae - 115; Bacteria - 10782; Metazoa - 377; Fungi - 151; Plants - 529; Viruses - 0; Other Eukaryotes - 4509 (source: NCBI BLink). & (gnl|cdd|36534 : 226.0) no description available & (gnl|cdd|30614 : 196.0) no description available & (reliability: 898.0) & (original description: Putative DEGP14, Description = Putative protease Do-like 14, PFAM = PF13365;PF13180)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf06621_23108-28697' '(at1g28110 : 724.0) serine carboxypeptidase-like 45 (SCPL45); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 46 (TAIR:AT2G33530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36496 : 468.0) no description available & (gnl|cdd|84781 : 409.0) no description available & (p08819|cbp2_wheat : 337.0) Serine carboxypeptidase 2 (EC 3.4.16.6) (Serine carboxypeptidase II) (Carboxypeptidase D) (CPDW-II) (CP-WII) [Contains: Serine carboxypeptidase 2 chain A (Serine carboxypeptidase II chain A); Serine carboxypeptidase 2 chain B (Serine ca & (reliability: 1448.0) & (original description: Putative SCPL45, Description = Serine carboxypeptidase-like 45, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf06621_105106-110108' '(p35100|clpc_pea : 652.0) ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor - Pisum sativum (Garden pea) & (at5g50920 : 625.0) Encodes a protein that is similar to ATP-dependent Clp protease ATP-binding subunit / ClpC. Involved in protein import into the chloroplast. May provide ATP source that drives the TIC (Translocon at the Inner envelope membrane of Chloroplasts) translocation machinery.; CLPC homologue 1 (CLPC1); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity, ATP binding; INVOLVED IN: protein import into chloroplast stroma, regulation of chlorophyll biosynthetic process, protein targeting to chloroplast, chloroplast organization; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA+ type, core (InterPro:IPR003593), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), UvrB/UvrC protein (InterPro:IPR001943), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Clp ATPase (TAIR:AT3G48870.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|79310 : 571.0) no description available & (gnl|cdd|36269 : 402.0) no description available & (reliability: 1250.0) & (original description: Putative clpA, Description = ATPase AAA-2 domain protein, PFAM = PF00004;PF02861;PF02861)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf06750_45630-62803' '(gnl|cdd|36496 : 385.0) no description available & (at2g33530 : 372.0) serine carboxypeptidase-like 46 (scpl46); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 45 (TAIR:AT1G28110.2); Has 3657 Blast hits to 3595 proteins in 428 species: Archae - 0; Bacteria - 306; Metazoa - 635; Fungi - 851; Plants - 1456; Viruses - 0; Other Eukaryotes - 409 (source: NCBI BLink). & (gnl|cdd|84781 : 351.0) no description available & (p52711|cbp23_horvu : 290.0) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] - Hordeum vulgare (Barley) & (reliability: 744.0) & (original description: Putative SCPL46, Description = Serine carboxypeptidase-like 46, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf06750_54675-61701' '(at1g43780 : 164.0) serine carboxypeptidase-like 44 (scpl44); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 42 (TAIR:AT5G42240.1); Has 3772 Blast hits to 3711 proteins in 431 species: Archae - 0; Bacteria - 430; Metazoa - 636; Fungi - 862; Plants - 1455; Viruses - 0; Other Eukaryotes - 389 (source: NCBI BLink). & (gnl|cdd|36496 : 155.0) no description available & (gnl|cdd|84781 : 130.0) no description available & (p55748|cbp22_horvu : 113.0) Serine carboxypeptidase II-2 precursor (EC 3.4.16.6) (CP-MII.2) [Contains: Serine carboxypeptidase II-2 chain A; Serine carboxypeptidase II-2 chain B] (Fragment) - Hordeum vulgare (Barley) & (reliability: 328.0) & (original description: Putative PGSC0003DMG401000860, Description = Carboxypeptidase, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf06750_56646-62433' '(gnl|cdd|36496 : 322.0) no description available & (at2g33530 : 313.0) serine carboxypeptidase-like 46 (scpl46); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 45 (TAIR:AT1G28110.2); Has 3657 Blast hits to 3595 proteins in 428 species: Archae - 0; Bacteria - 306; Metazoa - 635; Fungi - 851; Plants - 1456; Viruses - 0; Other Eukaryotes - 409 (source: NCBI BLink). & (gnl|cdd|84781 : 294.0) no description available & (p55748|cbp22_horvu : 240.0) Serine carboxypeptidase II-2 precursor (EC 3.4.16.6) (CP-MII.2) [Contains: Serine carboxypeptidase II-2 chain A; Serine carboxypeptidase II-2 chain B] (Fragment) - Hordeum vulgare (Barley) & (reliability: 626.0) & (original description: Putative PGSC0003DMG401000860, Description = Carboxypeptidase, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf07199_90185-96667' '(at3g45010 : 654.0) serine carboxypeptidase-like 48 (scpl48); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 47 (TAIR:AT5G22980.1); Has 3550 Blast hits to 3457 proteins in 337 species: Archae - 0; Bacteria - 135; Metazoa - 672; Fungi - 884; Plants - 1462; Viruses - 0; Other Eukaryotes - 397 (source: NCBI BLink). & (p37891|cbp3_orysa : 649.0) Serine carboxypeptidase 3 precursor (EC 3.4.16.5) (Serine carboxypeptidase III) - Oryza sativa (Rice) & (gnl|cdd|84781 : 423.0) no description available & (gnl|cdd|36496 : 372.0) no description available & (reliability: 1268.0) & (original description: Putative cpyA, Description = Carboxypeptidase, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf07391_382243-389947' '(at1g63120 : 378.0) AtRBL2 has been identified as a rhomboid protein involved in regulated intramembrane proteolysis (RIP). The enzyme has the proteolytic activity and substrate specificity comparable to the Drosophila Rho-1 protein.; RHOMBOID-like 2 (RBL2); CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 6 (TAIR:AT1G12750.3); Has 6856 Blast hits to 6855 proteins in 1947 species: Archae - 152; Bacteria - 4411; Metazoa - 521; Fungi - 179; Plants - 374; Viruses - 0; Other Eukaryotes - 1219 (source: NCBI BLink). & (gnl|cdd|37500 : 304.0) no description available & (gnl|cdd|85618 : 135.0) no description available & (reliability: 756.0) & (original description: Putative RBL2, Description = RHOMBOID-like protein 2, PFAM = PF01694)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf07497_103751-110198' '(at2g22970 : 479.0) serine carboxypeptidase-like 11 (SCPL11); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 12 (TAIR:AT2G22920.2); Has 3900 Blast hits to 3815 proteins in 421 species: Archae - 0; Bacteria - 404; Metazoa - 629; Fungi - 816; Plants - 1557; Viruses - 0; Other Eukaryotes - 494 (source: NCBI BLink). & (gnl|cdd|36496 : 453.0) no description available & (gnl|cdd|84781 : 423.0) no description available & (p07519|cbp1_horvu : 342.0) Serine carboxypeptidase 1 precursor (EC 3.4.16.5) (Serine carboxypeptidase I) (Carboxypeptidase C) (CP-MI) [Contains: Serine carboxypeptidase 1 chain A (Serine carboxypeptidase I chain A); Serine carboxypeptidase 1 chain B (Serine carbo & (reliability: 958.0) & (original description: Putative SCPL11, Description = Serine carboxypeptidase-like 11, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf07623_142235-150358' '(at5g51070 : 1193.0) ATP-dependent Clp protease regulatory subunit; EARLY RESPONSIVE TO DEHYDRATION 1 (ERD1); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: response to water deprivation; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: CLPC homologue 1 (TAIR:AT5G50920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30888 : 829.0) no description available & (p35100|clpc_pea : 720.0) ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor - Pisum sativum (Garden pea) & (gnl|cdd|36269 : 646.0) no description available & (reliability: 2386.0) & (original description: Putative CLPD, Description = Chaperone protein ClpD, chloroplastic, PFAM = PF10431;PF02861;PF02861;PF07724;PF00004)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf07722_1009-7542' '(at5g23210 : 322.0) serine carboxypeptidase-like 34 (SCPL34); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 35 (TAIR:AT5G08260.1); Has 3216 Blast hits to 3181 proteins in 264 species: Archae - 0; Bacteria - 14; Metazoa - 612; Fungi - 819; Plants - 1476; Viruses - 0; Other Eukaryotes - 295 (source: NCBI BLink). & (gnl|cdd|36496 : 275.0) no description available & (gnl|cdd|84781 : 261.0) no description available & (p08819|cbp2_wheat : 228.0) Serine carboxypeptidase 2 (EC 3.4.16.6) (Serine carboxypeptidase II) (Carboxypeptidase D) (CPDW-II) (CP-WII) [Contains: Serine carboxypeptidase 2 chain A (Serine carboxypeptidase II chain A); Serine carboxypeptidase 2 chain B (Serine ca & (reliability: 644.0) & (original description: Putative BRS1, Description = Carboxypeptidase, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf07935_264682-271850' '(p35100|clpc_pea : 1390.0) ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor - Pisum sativum (Garden pea) & (at5g50920 : 1360.0) Encodes a protein that is similar to ATP-dependent Clp protease ATP-binding subunit / ClpC. Involved in protein import into the chloroplast. May provide ATP source that drives the TIC (Translocon at the Inner envelope membrane of Chloroplasts) translocation machinery.; CLPC homologue 1 (CLPC1); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity, ATP binding; INVOLVED IN: protein import into chloroplast stroma, regulation of chlorophyll biosynthetic process, protein targeting to chloroplast, chloroplast organization; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA+ type, core (InterPro:IPR003593), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), UvrB/UvrC protein (InterPro:IPR001943), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Clp ATPase (TAIR:AT3G48870.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|79310 : 1205.0) no description available & (gnl|cdd|36269 : 828.0) no description available & (reliability: 2720.0) & (original description: Putative CD4A, Description = ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic, PFAM = PF07724;PF00004;PF02861;PF02861;PF10431;PF02151)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf08273_2670-13915' '(at4g36195 : 716.0) Serine carboxypeptidase S28 family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Peptidase S28 (InterPro:IPR008758); BEST Arabidopsis thaliana protein match is: Serine carboxypeptidase S28 family protein (TAIR:AT4G36190.1). & (gnl|cdd|37393 : 393.0) no description available & (gnl|cdd|86891 : 250.0) no description available & (reliability: 1432.0) & (original description: Putative EDA2, Description = Probable serine protease EDA2, PFAM = PF05577)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf08692_4328-35499' '(at3g03380 : 1628.0) Encodes a putative DegP protease.; DegP protease 7 (DegP7); CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03370.1); Has 8327 Blast hits to 7895 proteins in 2064 species: Archae - 65; Bacteria - 6254; Metazoa - 235; Fungi - 503; Plants - 137; Viruses - 0; Other Eukaryotes - 1133 (source: NCBI BLink). & (gnl|cdd|36635 : 623.0) no description available & (gnl|cdd|30614 : 96.1) no description available & (reliability: 3256.0) & (original description: Putative DEGP7, Description = Protease Do-like 7, PFAM = PF12812;PF12812;PF13180;PF13365)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf09355_34772-69468' '(p93648|lonh2_maize : 1407.0) Lon protease homolog 2, mitochondrial precursor (EC 3.4.21.-) - Zea mays (Maize) & (at5g26860 : 1387.0) Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins.; lon protease 1 (LON1); FUNCTIONS IN: serine-type peptidase activity, protein binding, ATP-dependent peptidase activity, ATP binding; INVOLVED IN: proteolysis; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), Peptidase S16, active site (InterPro:IPR008268), Peptidase S16, ATP-dependent protease La (InterPro:IPR004815), Peptidase S16, lon N-terminal (InterPro:IPR003111), Peptidase S16, Lon C-terminal (InterPro:IPR008269), ATPase, AAA+ type, core (InterPro:IPR003593), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: lon protease 4 (TAIR:AT3G05790.1); Has 18238 Blast hits to 18056 proteins in 2534 species: Archae - 547; Bacteria - 9804; Metazoa - 746; Fungi - 600; Plants - 445; Viruses - 7; Other Eukaryotes - 6089 (source: NCBI BLink). & (gnl|cdd|37215 : 1173.0) no description available & (gnl|cdd|30814 : 623.0) no description available & (reliability: 2774.0) & (original description: Putative LON2, Description = Lon protease homolog, mitochondrial, PFAM = PF00004;PF05362;PF02190)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf09808_160635-165192' '(at4g17100 : 268.0) EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endoribonuclease XendoU (InterPro:IPR018998). & (gnl|cdd|87957 : 157.0) no description available & (gnl|cdd|38060 : 125.0) no description available & (reliability: 536.0) & (original description: Putative dl4585c, Description = Poly(U)-specific endoribonuclease-B-like protein, PFAM = PF09412)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf10222_905811-915116' '(at2g23010 : 459.0) serine carboxypeptidase-like 9 (SCPL9); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: sinapoylglucose 1 (TAIR:AT2G22990.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36496 : 424.0) no description available & (gnl|cdd|84781 : 396.0) no description available & (p07519|cbp1_horvu : 335.0) Serine carboxypeptidase 1 precursor (EC 3.4.16.5) (Serine carboxypeptidase I) (Carboxypeptidase C) (CP-MI) [Contains: Serine carboxypeptidase 1 chain A (Serine carboxypeptidase I chain A); Serine carboxypeptidase 1 chain B (Serine carbo & (reliability: 918.0) & (original description: Putative SCPL9, Description = Serine carboxypeptidase-like 9, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf10464_13911-22378' '(gnl|cdd|36496 : 467.0) no description available & (gnl|cdd|84781 : 450.0) no description available & (p52711|cbp23_horvu : 444.0) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] - Hordeum vulgare (Barley) & (at2g35780 : 429.0) serine carboxypeptidase-like 26 (scpl26); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 27 (TAIR:AT3G07990.1); Has 3733 Blast hits to 3660 proteins in 399 species: Archae - 0; Bacteria - 269; Metazoa - 644; Fungi - 857; Plants - 1549; Viruses - 0; Other Eukaryotes - 414 (source: NCBI BLink). & (reliability: 858.0) & (original description: Putative Sb01g033770, Description = Carboxypeptidase, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf11480_30255-37264' '(at1g02560 : 468.0) One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).; nuclear encoded CLP protease 5 (CLPP5); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: peptidyl-cysteine S-nitrosylation; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP, active site (InterPro:IPR018215), Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: CLP protease proteolytic subunit 3 (TAIR:AT1G66670.1); Has 13512 Blast hits to 13510 proteins in 3028 species: Archae - 2; Bacteria - 8525; Metazoa - 147; Fungi - 82; Plants - 1082; Viruses - 85; Other Eukaryotes - 3589 (source: NCBI BLink). & (gnl|cdd|36058 : 307.0) no description available & (gnl|cdd|80601 : 293.0) no description available & (p56317|clpp_chlvu : 167.0) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Chlorella vulgaris (Green alga) & (reliability: 936.0) & (original description: Putative CLPP5, Description = ATP-dependent Clp protease proteolytic subunit 5, chloroplastic, PFAM = PF00574)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf11581_232038-238741' '(at5g45390 : 363.0) One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).; CLP protease P4 (CLPP4); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: chloroplast organization, regulation of timing of transition from vegetative to reproductive phase; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP, active site (InterPro:IPR018215), Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: CLP protease proteolytic subunit 3 (TAIR:AT1G66670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36058 : 268.0) no description available & (gnl|cdd|79637 : 251.0) no description available & (p56317|clpp_chlvu : 162.0) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Chlorella vulgaris (Green alga) & (reliability: 726.0) & (original description: Putative clpP, Description = ATP-dependent Clp protease proteolytic subunit, PFAM = PF00574)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf12568_69905-74709' '(gnl|cdd|29118 : 492.0) no description available & (at1g47710 : 474.0) Serine protease inhibitor (SERPIN) family protein; FUNCTIONS IN: serine-type endopeptidase inhibitor activity, cysteine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease inhibitor I4, serpin, plant (InterPro:IPR015554), Protease inhibitor I4, serpin (InterPro:IPR000215); BEST Arabidopsis thaliana protein match is: Serine protease inhibitor (SERPIN) family protein (TAIR:AT3G45220.1); Has 6643 Blast hits to 6565 proteins in 500 species: Archae - 66; Bacteria - 387; Metazoa - 5142; Fungi - 12; Plants - 353; Viruses - 463; Other Eukaryotes - 220 (source: NCBI BLink). & (p06293|prtz_horvu : 371.0) Protein Z (Z4) (Major endosperm albumin) - Hordeum vulgare (Barley) & (gnl|cdd|37603 : 329.0) no description available & (reliability: 948.0) & (original description: Putative At1g47710, Description = Serpin-ZX, PFAM = PF00079)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf12670_44110-46922' '(at3g59520 : 373.0) RHOMBOID-like protein 13 (RBL13); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 15 (TAIR:AT3G58460.2); Has 1791 Blast hits to 1791 proteins in 774 species: Archae - 24; Bacteria - 1315; Metazoa - 107; Fungi - 76; Plants - 130; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (gnl|cdd|37843 : 180.0) no description available & (reliability: 746.0) & (original description: Putative RBL13, Description = RHOMBOID-like protein 13, PFAM = PF01694)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf13448_1-7886' '(at4g12910 : 711.0) serine carboxypeptidase-like 20 (scpl20); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 21 (TAIR:AT3G25420.1); Has 4118 Blast hits to 3857 proteins in 425 species: Archae - 0; Bacteria - 294; Metazoa - 699; Fungi - 932; Plants - 1620; Viruses - 0; Other Eukaryotes - 573 (source: NCBI BLink). & (p37890|cbp1_orysa : 701.0) Serine carboxypeptidase 1 precursor (EC 3.4.16.5) (Serine carboxypeptidase I) (Carboxypeptidase C) - Oryza sativa (Rice) & (gnl|cdd|36496 : 469.0) no description available & (gnl|cdd|84781 : 468.0) no description available & (reliability: 1422.0) & (original description: Putative SCPL20, Description = Serine carboxypeptidase-like 20, PFAM = PF00450)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf15100_26687-36989' '(at5g23140 : 345.0) One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).; nuclear-encoded CLP protease P7 (NCLPP7); FUNCTIONS IN: cobalt ion binding, zinc ion binding; INVOLVED IN: proteolysis; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP, active site (InterPro:IPR018215), Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: nuclear encoded CLP protease 5 (TAIR:AT1G02560.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80601 : 315.0) no description available & (gnl|cdd|36058 : 304.0) no description available & (q85fj8|clpp_adica : 145.0) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Adiantum capillus-veneris (Maidenhair fern) & (reliability: 690.0) & (original description: Putative clpP, Description = ATP-dependent Clp protease proteolytic subunit, PFAM = PF00574)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf25794_15292-39244' '(at5g47040 : 1366.0) Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins.; lon protease 2 (LON2); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein import into peroxisome matrix, docking, growth, lateral root development; LOCATED IN: organelle lumen, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), Peptidase S16, active site (InterPro:IPR008268), Peptidase S16, ATP-dependent protease La (InterPro:IPR004815), Peptidase S16, lon N-terminal (InterPro:IPR003111), Peptidase S16, Lon C-terminal (InterPro:IPR008269), ATPase, AAA+ type, core (InterPro:IPR003593), Regulator of G protein signalling superfamily (InterPro:IPR016137), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: lon protease 1 (TAIR:AT5G26860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o04979|lonh1_spiol : 1333.0) Lon protease homolog 1, mitochondrial precursor (EC 3.4.21.-) - Spinacia oleracea (Spinach) & (gnl|cdd|37215 : 974.0) no description available & (gnl|cdd|30814 : 821.0) no description available & (reliability: 2732.0) & (original description: Putative bsgA, Description = ATP-dependent protease La, PFAM = PF02190;PF05362;PF00004)' T '29.5.5' 'protein.degradation.serine protease' 'niben101scf27945_43991-46371' '(at3g61980 : 91.7) serine protease inhibitor, Kazal-type family protein; FUNCTIONS IN: serine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I1, Kazal (InterPro:IPR002350); BEST Arabidopsis thaliana protein match is: serine protease inhibitor, Kazal-type family protein (TAIR:AT4G01575.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative At4g01575, Description = Serine protease inhibitor, Kazal-type family protein, PFAM = )' T '29.5.7' 'protein.degradation.metalloprotease' 'nbv0.3scaffold1410_594-37310' '(at3g04340 : 1262.0) embryo defective 2458 (emb2458); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, metalloendopeptidase activity, nucleotide binding, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1); Has 32899 Blast hits to 29484 proteins in 3073 species: Archae - 1598; Bacteria - 9893; Metazoa - 6215; Fungi - 3644; Plants - 2880; Viruses - 25; Other Eukaryotes - 8644 (source: NCBI BLink). & (gnl|cdd|35950 : 278.0) no description available & (o82150|ftsh_tobac : 157.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|30813 : 154.0) no description available & (reliability: 2524.0) & (original description: Putative ftsH, Description = ATP-dependent zinc metalloprotease FtsH, PFAM = PF00004)' T '29.5.7' 'protein.degradation.metalloprotease' 'nbv0.3scaffold6065_37855-56025' '(at1g79560 : 1484.0) Encodes an FtsH protease that is localized to the chloroplast. Mutations in this locus result in embryo lethality.; FTSH protease 12 (FTSH12); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35950 : 444.0) no description available & (gnl|cdd|30813 : 294.0) no description available & (q9bae0|ftsh_medsa : 261.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Medicago sativa (Alfalfa) & (reliability: 2968.0) & (original description: Putative FTSH12, Description = ATP-dependent zinc metalloprotease FTSH 12, chloroplastic, PFAM = PF01434;PF00004)' T '29.5.7' 'protein.degradation.metalloprotease' 'nbv0.3scaffold20823_1722-13259' '(at5g58870 : 996.0) encodes an FtsH protease that is localized to the chloroplast; FTSH protease 9 (ftsh9); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 7 (TAIR:AT3G47060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35950 : 601.0) no description available & (gnl|cdd|30813 : 501.0) no description available & (q9bae0|ftsh_medsa : 347.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Medicago sativa (Alfalfa) & (reliability: 1992.0) & (original description: Putative FTSH9, Description = ATP-dependent zinc metalloprotease FTSH 9, chloroplastic, PFAM = PF06480;PF00004;PF01434)' T '29.5.7' 'protein.degradation.metalloprotease' 'nbv0.3scaffold37225_1-2464' '(at1g24140 : 413.0) Matrixin family protein; FUNCTIONS IN: metallopeptidase activity, metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis, metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M10, metallopeptidase (InterPro:IPR001818), Peptidoglycan binding-like (InterPro:IPR002477), Peptidase M10A, cysteine switch, zinc binding site (InterPro:IPR021158), Peptidase M10A, matrix metallopeptidase (InterPro:IPR021190), Peptidase, metallopeptidase (InterPro:IPR006026); BEST Arabidopsis thaliana protein match is: matrix metalloproteinase (TAIR:AT1G70170.1); Has 2621 Blast hits to 2428 proteins in 195 species: Archae - 3; Bacteria - 89; Metazoa - 2200; Fungi - 4; Plants - 185; Viruses - 42; Other Eukaryotes - 98 (source: NCBI BLink). & (p29136|mep1_soybn : 260.0) Metalloendoproteinase 1 precursor (EC 3.4.24.-) (SMEP1) - Glycine max (Soybean) & (gnl|cdd|36778 : 216.0) no description available & (gnl|cdd|84759 : 193.0) no description available & (reliability: 826.0) & (original description: Putative 3MMP, Description = Metalloendoproteinase 3-MMP, PFAM = PF00413;PF01471)' T '29.5.7' 'protein.degradation.metalloprotease' 'nbv0.3scaffold51803_221-12698' '(at2g45240 : 693.0) Encodes a cytoplasmic MAP1 like methionine aminopeptidase which is involved in removing the N-terminal methionine from proteins. Induced mutants using RNAi technology which knocks out both MAP1 and MAP2 like genes show abnormal development.; methionine aminopeptidase 1A (MAP1A); FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity, zinc ion binding; INVOLVED IN: protein processing, N-terminal protein amino acid modification; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), Peptidase M24, structural domain (InterPro:IPR000994), Peptidase M24A, methionine aminopeptidase, subfamily 1 (InterPro:IPR002467), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 1B (TAIR:AT1G13270.1); Has 18085 Blast hits to 18064 proteins in 2832 species: Archae - 403; Bacteria - 12111; Metazoa - 396; Fungi - 241; Plants - 256; Viruses - 0; Other Eukaryotes - 4678 (source: NCBI BLink). & (gnl|cdd|37949 : 565.0) no description available & (gnl|cdd|29971 : 375.0) no description available & (reliability: 1386.0) & (original description: Putative MAP1A, Description = Methionine aminopeptidase 1A, PFAM = PF15801;PF00557)' T '29.5.7' 'protein.degradation.metalloprotease' 'nbv0.5scaffold2217_248478-252030' '(at2g30950 : 645.0) Metalloprotease that functions in thylakoid membrane biogenesis. Involved in the repair of PSII following damaged incurred during photoinhibition. Forms a complex with VAR1. Mutants show a variegated phenotype, which decreases during development. Transcript and protein levels increase with light intensity.; VARIEGATED 2 (VAR2); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity, zinc ion binding; INVOLVED IN: photoinhibition, oxygen and reactive oxygen species metabolic process, thylakoid membrane organization, PSII associated light-harvesting complex II catabolic process, protein catabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 8 (TAIR:AT1G06430.1); Has 42824 Blast hits to 40381 proteins in 3333 species: Archae - 1597; Bacteria - 18199; Metazoa - 4991; Fungi - 3835; Plants - 3350; Viruses - 34; Other Eukaryotes - 10818 (source: NCBI BLink). & (gnl|cdd|35950 : 452.0) no description available & (gnl|cdd|30813 : 438.0) no description available & (o82150|ftsh_tobac : 324.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (reliability: 1290.0) & (original description: Putative ftsH, Description = ATP-dependent zinc metalloprotease FtsH, PFAM = PF01434;PF00004)' T '29.5.7' 'protein.degradation.metalloprotease' 'nbv0.5scaffold2250_264714-277750' '(at2g26140 : 883.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 4 (ftsh4); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, plastid, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: FTSH protease 11 (TAIR:AT5G53170.1); Has 39775 Blast hits to 37259 proteins in 3240 species: Archae - 1584; Bacteria - 15744; Metazoa - 5149; Fungi - 3764; Plants - 3335; Viruses - 40; Other Eukaryotes - 10159 (source: NCBI BLink). & (gnl|cdd|35953 : 787.0) no description available & (gnl|cdd|30813 : 552.0) no description available & (q5z974|ftsh_orysa : 349.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 1766.0) & (original description: Putative FTSH5, Description = ATP-dependent zinc metalloprotease FTSH 5, mitochondrial, PFAM = PF00004;PF01434)' T '29.5.7' 'protein.degradation.metalloprotease' 'nbv0.5scaffold3138_41732-50432' '(at3g16290 : 679.0) embryo defective 2083 (EMB2083); FUNCTIONS IN: in 8 functions; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Peptidase M41 (InterPro:IPR000642), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1); Has 40436 Blast hits to 36159 proteins in 3226 species: Archae - 1511; Bacteria - 13353; Metazoa - 6817; Fungi - 4228; Plants - 3474; Viruses - 31; Other Eukaryotes - 11022 (source: NCBI BLink). & (gnl|cdd|35950 : 387.0) no description available & (gnl|cdd|30813 : 310.0) no description available & (o82150|ftsh_tobac : 264.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (reliability: 1358.0) & (original description: Putative ftsH, Description = ATP-dependent zinc metalloprotease FtsH, PFAM = PF00004;PF01434)' T '29.5.7' 'protein.degradation.metalloprotease' 'nbv0.5scaffold3138_42874-47047' '(at3g16290 : 219.0) embryo defective 2083 (EMB2083); FUNCTIONS IN: in 8 functions; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Peptidase M41 (InterPro:IPR000642), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1); Has 40436 Blast hits to 36159 proteins in 3226 species: Archae - 1511; Bacteria - 13353; Metazoa - 6817; Fungi - 4228; Plants - 3474; Viruses - 31; Other Eukaryotes - 11022 (source: NCBI BLink). & (gnl|cdd|35950 : 93.6) no description available & (reliability: 438.0) & (original description: Putative FTSHI2, Description = AtFTSHI2, PFAM = )' T '29.5.7' 'protein.degradation.metalloprotease' 'niben044scf00007488ctg022_3217-13978' '(gnl|cdd|37949 : 427.0) no description available & (at2g45240 : 395.0) Encodes a cytoplasmic MAP1 like methionine aminopeptidase which is involved in removing the N-terminal methionine from proteins. Induced mutants using RNAi technology which knocks out both MAP1 and MAP2 like genes show abnormal development.; methionine aminopeptidase 1A (MAP1A); FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity, zinc ion binding; INVOLVED IN: protein processing, N-terminal protein amino acid modification; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), Peptidase M24, structural domain (InterPro:IPR000994), Peptidase M24A, methionine aminopeptidase, subfamily 1 (InterPro:IPR002467), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 1B (TAIR:AT1G13270.1); Has 18085 Blast hits to 18064 proteins in 2832 species: Archae - 403; Bacteria - 12111; Metazoa - 396; Fungi - 241; Plants - 256; Viruses - 0; Other Eukaryotes - 4678 (source: NCBI BLink). & (gnl|cdd|29971 : 325.0) no description available & (reliability: 790.0) & (original description: Putative METAP1, Description = Methionine aminopeptidase 1, PFAM = PF15801;PF00557)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben044scf00010647ctg006_1-7065' '(at1g79560 : 251.0) Encodes an FtsH protease that is localized to the chloroplast. Mutations in this locus result in embryo lethality.; FTSH protease 12 (FTSH12); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 502.0) & (original description: Putative FTSH12, Description = ATP-dependent zinc metalloprotease FTSH 12, chloroplastic, PFAM = )' T '29.5.7' 'protein.degradation.metalloprotease' 'niben044scf00014876ctg017_11393-28194' '(at5g53170 : 1065.0) encodes an FtsH protease that is localized to the chloroplast and the mitochondrion; FTSH protease 11 (FTSH11); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: response to heat, PSII associated light-harvesting complex II catabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FTSH protease 4 (TAIR:AT2G26140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35953 : 809.0) no description available & (gnl|cdd|30813 : 544.0) no description available & (q5z974|ftsh_orysa : 382.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 2130.0) & (original description: Putative FTSH11, Description = ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial, PFAM = PF01434;PF00004)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben044scf00017029ctg004_3861-14970' '(at2g36305 : 301.0) Encodes an endoprotease involved in the cleavage of prenylated CaaX-box proteins. In vitro, it can cleave a farnesylated tetrapeptide and it can promote membrane-localization of a farnesylated GFP:AtROP9 protein when both are expressed in yeast.; farnesylated protein-converting enzyme 2 (FACE2); CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); Has 361 Blast hits to 361 proteins in 186 species: Archae - 0; Bacteria - 39; Metazoa - 116; Fungi - 118; Plants - 43; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|39333 : 143.0) no description available & (reliability: 602.0) & (original description: Putative FACE2, Description = CAAX prenyl protease 2, PFAM = PF02517)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben044scf00020151ctg008_1300-7340' '(at5g56730 : 577.0) Insulinase (Peptidase family M16) protein; FUNCTIONS IN: metalloendopeptidase activity, catalytic activity, zinc ion binding, metal ion binding; INVOLVED IN: proteolysis; LOCATED IN: mitochondrion, chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) family protein (TAIR:AT5G42390.1); Has 9157 Blast hits to 9081 proteins in 2135 species: Archae - 18; Bacteria - 6669; Metazoa - 661; Fungi - 329; Plants - 276; Viruses - 3; Other Eukaryotes - 1201 (source: NCBI BLink). & (gnl|cdd|36177 : 151.0) no description available & (reliability: 1154.0) & (original description: Putative At5g56730, Description = Mitochondrial-processing peptidase subunit beta, mitochondrial, putative, PFAM = PF05193)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben044scf00024074ctg011_1-9991' '(at1g07510 : 1094.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 10 (ftsh10); FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 3 (TAIR:AT2G29080.1); Has 37747 Blast hits to 35440 proteins in 3262 species: Archae - 1533; Bacteria - 14237; Metazoa - 4767; Fungi - 3643; Plants - 3223; Viruses - 27; Other Eukaryotes - 10317 (source: NCBI BLink). & (gnl|cdd|35950 : 763.0) no description available & (gnl|cdd|30813 : 578.0) no description available & (q5z974|ftsh_orysa : 419.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 2188.0) & (original description: Putative FTSH10, Description = ATP-dependent zinc metalloprotease FTSH 10, mitochondrial, PFAM = PF00004;PF06480;PF01434)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben044scf00026134ctg000_22457-27974' '(o82150|ftsh_tobac : 1132.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (at5g42270 : 1026.0) VAR1 contains a conserved motif for ATPase and a metalloprotease characteristic to FtsH proteins, and is targeted into chloroplasts. A VAR1-fusion protein synthesized in vitro exhibited ATPase activity and partial metalloprotease activity. This protein is located to the thylakoid membrane and forms a complex with VAR2. FtsH1 (VAR1) and FtsH5 are interchangeable in thylakoid membranes.; VARIEGATED 1 (VAR1); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: photoinhibition, PSII associated light-harvesting complex II catabolic process, protein catabolic process; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30813 : 682.0) no description available & (gnl|cdd|35950 : 644.0) no description available & (reliability: 2052.0) & (original description: Putative FTSH, Description = ATP-dependent zinc metalloprotease FTSH, chloroplastic, PFAM = PF01434;PF00004)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben044scf00027068ctg022_1-5135' '(at2g29080 : 912.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 3 (ftsh3); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 10 (TAIR:AT1G07510.1); Has 42068 Blast hits to 39734 proteins in 3332 species: Archae - 1581; Bacteria - 17420; Metazoa - 4814; Fungi - 3774; Plants - 3280; Viruses - 30; Other Eukaryotes - 11169 (source: NCBI BLink). & (gnl|cdd|35950 : 679.0) no description available & (gnl|cdd|30813 : 532.0) no description available & (q5z974|ftsh_orysa : 401.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 1820.0) & (original description: Putative ftsH, Description = AFG3-like protein 2, PFAM = PF00004;PF06480;PF01434)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben044scf00033574ctg000_1133-10256' '(at2g26140 : 947.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 4 (ftsh4); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, plastid, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: FTSH protease 11 (TAIR:AT5G53170.1); Has 39775 Blast hits to 37259 proteins in 3240 species: Archae - 1584; Bacteria - 15744; Metazoa - 5149; Fungi - 3764; Plants - 3335; Viruses - 40; Other Eukaryotes - 10159 (source: NCBI BLink). & (gnl|cdd|35953 : 801.0) no description available & (gnl|cdd|30813 : 560.0) no description available & (q5z974|ftsh_orysa : 362.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 1894.0) & (original description: Putative FTSH4, Description = ATP-dependent zinc metalloprotease FTSH 4, mitochondrial, PFAM = PF00004;PF01434)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben044scf00042000ctg009_1853-10906' '(at4g23940 : 1231.0) FtsH extracellular protease family; FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT2G30950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35950 : 478.0) no description available & (gnl|cdd|30813 : 381.0) no description available & (q5z974|ftsh_orysa : 270.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 2462.0) & (original description: Putative FTSHI1, Description = Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic, PFAM = PF01434;PF00004)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf00013_342115-357014' '(at3g16290 : 681.0) embryo defective 2083 (EMB2083); FUNCTIONS IN: in 8 functions; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Peptidase M41 (InterPro:IPR000642), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1); Has 40436 Blast hits to 36159 proteins in 3226 species: Archae - 1511; Bacteria - 13353; Metazoa - 6817; Fungi - 4228; Plants - 3474; Viruses - 31; Other Eukaryotes - 11022 (source: NCBI BLink). & (gnl|cdd|35950 : 388.0) no description available & (gnl|cdd|30813 : 308.0) no description available & (o82150|ftsh_tobac : 266.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (reliability: 1362.0) & (original description: Putative ftsH, Description = ATP-dependent zinc metalloprotease FtsH, PFAM = PF00004;PF01434)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf00013_351775-355951' '(at3g16290 : 217.0) embryo defective 2083 (EMB2083); FUNCTIONS IN: in 8 functions; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Peptidase M41 (InterPro:IPR000642), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1); Has 40436 Blast hits to 36159 proteins in 3226 species: Archae - 1511; Bacteria - 13353; Metazoa - 6817; Fungi - 4228; Plants - 3474; Viruses - 31; Other Eukaryotes - 11022 (source: NCBI BLink). & (gnl|cdd|35950 : 92.8) no description available & (reliability: 434.0) & (original description: Putative FTSHI2, Description = AtFTSHI2, PFAM = )' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf00132_33922-36670' '(at4g23940 : 180.0) FtsH extracellular protease family; FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT2G30950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35950 : 154.0) no description available & (gnl|cdd|30813 : 136.0) no description available & (q5z974|ftsh_orysa : 94.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 360.0) & (original description: Putative ftsH, Description = ATP-dependent zinc metalloprotease FtsH, PFAM = PF00004)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf00229_27887-40463' '(at1g07510 : 1071.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 10 (ftsh10); FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 3 (TAIR:AT2G29080.1); Has 37747 Blast hits to 35440 proteins in 3262 species: Archae - 1533; Bacteria - 14237; Metazoa - 4767; Fungi - 3643; Plants - 3223; Viruses - 27; Other Eukaryotes - 10317 (source: NCBI BLink). & (gnl|cdd|35950 : 764.0) no description available & (gnl|cdd|30813 : 579.0) no description available & (q5z974|ftsh_orysa : 417.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 2142.0) & (original description: Putative FTSH10, Description = ATP-dependent zinc metalloprotease FTSH 10, mitochondrial, PFAM = PF00004;PF01434;PF06480)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf00229_34176-37746' '(at1g07510 : 626.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 10 (ftsh10); FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 3 (TAIR:AT2G29080.1); Has 37747 Blast hits to 35440 proteins in 3262 species: Archae - 1533; Bacteria - 14237; Metazoa - 4767; Fungi - 3643; Plants - 3223; Viruses - 27; Other Eukaryotes - 10317 (source: NCBI BLink). & (gnl|cdd|35950 : 528.0) no description available & (gnl|cdd|30813 : 407.0) no description available & (o82150|ftsh_tobac : 296.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (reliability: 1252.0) & (original description: Putative ftsH, Description = AFG3 family protein, PFAM = PF06480;PF00004)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf00530_538707-554261' '(at5g53170 : 1050.0) encodes an FtsH protease that is localized to the chloroplast and the mitochondrion; FTSH protease 11 (FTSH11); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: response to heat, PSII associated light-harvesting complex II catabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FTSH protease 4 (TAIR:AT2G26140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35953 : 810.0) no description available & (gnl|cdd|30813 : 544.0) no description available & (q39444|ftsh_capan : 379.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (Fragment) - Capsicum annuum (Bell pepper) & (reliability: 2100.0) & (original description: Putative FTSH11, Description = ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial, PFAM = PF00004;PF01434)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf00551_558103-574696' '(at5g56730 : 1456.0) Insulinase (Peptidase family M16) protein; FUNCTIONS IN: metalloendopeptidase activity, catalytic activity, zinc ion binding, metal ion binding; INVOLVED IN: proteolysis; LOCATED IN: mitochondrion, chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) family protein (TAIR:AT5G42390.1); Has 9157 Blast hits to 9081 proteins in 2135 species: Archae - 18; Bacteria - 6669; Metazoa - 661; Fungi - 329; Plants - 276; Viruses - 3; Other Eukaryotes - 1201 (source: NCBI BLink). & (gnl|cdd|36177 : 406.0) no description available & (gnl|cdd|30957 : 172.0) no description available & (reliability: 2912.0) & (original description: Putative At5g56730, Description = Zinc protease PQQL-like, PFAM = PF00675;PF05193;PF05193)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf00861_700258-721565' '(at3g59990 : 716.0) Encodes a MAP2 like methionine aminopeptidase; methionine aminopeptidase 2B (MAP2B); FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: protein processing; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24A, methionine aminopeptidase, subfamily 2 (InterPro:IPR002468), Peptidase M24, structural domain (InterPro:IPR000994), Peptidase M24A, methionine aminopeptidase, subfamily 2, binding site (InterPro:IPR018349), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 2A (TAIR:AT2G44180.1). & (gnl|cdd|37986 : 652.0) no description available & (gnl|cdd|29973 : 469.0) no description available & (reliability: 1432.0) & (original description: Putative MAP2B, Description = Methionine aminopeptidase 2B, PFAM = PF00557)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf00978_180072-189368' '(at3g16290 : 1063.0) embryo defective 2083 (EMB2083); FUNCTIONS IN: in 8 functions; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Peptidase M41 (InterPro:IPR000642), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1); Has 40436 Blast hits to 36159 proteins in 3226 species: Archae - 1511; Bacteria - 13353; Metazoa - 6817; Fungi - 4228; Plants - 3474; Viruses - 31; Other Eukaryotes - 11022 (source: NCBI BLink). & (gnl|cdd|35950 : 465.0) no description available & (gnl|cdd|30813 : 368.0) no description available & (o82150|ftsh_tobac : 276.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (reliability: 2126.0) & (original description: Putative FTSHI2, Description = Probable inactive ATP-dependent zinc metalloprotease FTSHI 2, chloroplastic, PFAM = PF00004;PF01434)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf01157_84721-89818' '(o82150|ftsh_tobac : 1243.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (at5g42270 : 1043.0) VAR1 contains a conserved motif for ATPase and a metalloprotease characteristic to FtsH proteins, and is targeted into chloroplasts. A VAR1-fusion protein synthesized in vitro exhibited ATPase activity and partial metalloprotease activity. This protein is located to the thylakoid membrane and forms a complex with VAR2. FtsH1 (VAR1) and FtsH5 are interchangeable in thylakoid membranes.; VARIEGATED 1 (VAR1); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: photoinhibition, PSII associated light-harvesting complex II catabolic process, protein catabolic process; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30813 : 675.0) no description available & (gnl|cdd|35950 : 639.0) no description available & (reliability: 2086.0) & (original description: Putative FTSH, Description = ATP-dependent zinc metalloprotease FTSH, chloroplastic, PFAM = PF01434;PF00004)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf01469_150968-162399' '(at4g37040 : 560.0) encodes a methionine aminopeptidase; methionine aminopeptidase 1D (MAP1D); FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, N-terminal protein amino acid modification; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24, structural domain (InterPro:IPR000994), Peptidase M24A, methionine aminopeptidase, subfamily 1 (InterPro:IPR002467), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 1B (TAIR:AT1G13270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37949 : 449.0) no description available & (gnl|cdd|29971 : 360.0) no description available & (reliability: 1120.0) & (original description: Putative MAP1D, Description = Methionine aminopeptidase 1D, chloroplastic/mitochondrial, PFAM = PF00557)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf01469_153571-156973' '(at4g37040 : 246.0) encodes a methionine aminopeptidase; methionine aminopeptidase 1D (MAP1D); FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, N-terminal protein amino acid modification; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24, structural domain (InterPro:IPR000994), Peptidase M24A, methionine aminopeptidase, subfamily 1 (InterPro:IPR002467), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 1B (TAIR:AT1G13270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37949 : 219.0) no description available & (gnl|cdd|29971 : 155.0) no description available & (reliability: 492.0) & (original description: Putative map, Description = MAP 1, PFAM = PF00557)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf01494_1539786-1542887' '(at1g24140 : 380.0) Matrixin family protein; FUNCTIONS IN: metallopeptidase activity, metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis, metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M10, metallopeptidase (InterPro:IPR001818), Peptidoglycan binding-like (InterPro:IPR002477), Peptidase M10A, cysteine switch, zinc binding site (InterPro:IPR021158), Peptidase M10A, matrix metallopeptidase (InterPro:IPR021190), Peptidase, metallopeptidase (InterPro:IPR006026); BEST Arabidopsis thaliana protein match is: matrix metalloproteinase (TAIR:AT1G70170.1); Has 2621 Blast hits to 2428 proteins in 195 species: Archae - 3; Bacteria - 89; Metazoa - 2200; Fungi - 4; Plants - 185; Viruses - 42; Other Eukaryotes - 98 (source: NCBI BLink). & (p29136|mep1_soybn : 266.0) Metalloendoproteinase 1 precursor (EC 3.4.24.-) (SMEP1) - Glycine max (Soybean) & (gnl|cdd|36778 : 214.0) no description available & (gnl|cdd|58578 : 190.0) no description available & (reliability: 760.0) & (original description: Putative 1MMP, Description = Metalloendoproteinase 1, PFAM = PF00413;PF01471)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf01842_235184-245982' '(at2g36305 : 295.0) Encodes an endoprotease involved in the cleavage of prenylated CaaX-box proteins. In vitro, it can cleave a farnesylated tetrapeptide and it can promote membrane-localization of a farnesylated GFP:AtROP9 protein when both are expressed in yeast.; farnesylated protein-converting enzyme 2 (FACE2); CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); Has 361 Blast hits to 361 proteins in 186 species: Archae - 0; Bacteria - 39; Metazoa - 116; Fungi - 118; Plants - 43; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|39333 : 142.0) no description available & (reliability: 590.0) & (original description: Putative FACE2, Description = CAAX prenyl protease 2, PFAM = PF02517)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf01964_939429-950278' '(at1g09300 : 692.0) Metallopeptidase M24 family protein; FUNCTIONS IN: metallopeptidase activity, manganese ion binding, metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, cellular process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal (InterPro:IPR007865), Peptidase M24, structural domain (InterPro:IPR000994), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: Metallopeptidase M24 family protein (TAIR:AT4G29490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37625 : 545.0) no description available & (gnl|cdd|29972 : 271.0) no description available & (reliability: 1384.0) & (original description: Putative BnaA08g26500D, Description = BnaA08g26500D protein, PFAM = PF00557;PF05195)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf02175_297485-302978' '(o82150|ftsh_tobac : 1118.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (at5g42270 : 1023.0) VAR1 contains a conserved motif for ATPase and a metalloprotease characteristic to FtsH proteins, and is targeted into chloroplasts. A VAR1-fusion protein synthesized in vitro exhibited ATPase activity and partial metalloprotease activity. This protein is located to the thylakoid membrane and forms a complex with VAR2. FtsH1 (VAR1) and FtsH5 are interchangeable in thylakoid membranes.; VARIEGATED 1 (VAR1); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: photoinhibition, PSII associated light-harvesting complex II catabolic process, protein catabolic process; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30813 : 682.0) no description available & (gnl|cdd|35950 : 641.0) no description available & (reliability: 2046.0) & (original description: Putative FTSH, Description = ATP-dependent zinc metalloprotease FTSH, chloroplastic, PFAM = PF00004;PF01434)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf02408_364168-383064' '(at3g19170 : 1565.0) Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed only in siliques and flowers; presequence protease 1 (PREP1); CONTAINS InterPro DOMAIN/s: Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16C associated (InterPro:IPR013578), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: presequence protease 2 (TAIR:AT1G49630.2). & (gnl|cdd|37230 : 1250.0) no description available & (gnl|cdd|31229 : 800.0) no description available & (reliability: 3130.0) & (original description: Putative PREP1, Description = Presequence protease 1, chloroplastic/mitochondrial, PFAM = PF00675;PF08367;PF05193)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf02685_22866-25488' '(at2g30950 : 668.0) Metalloprotease that functions in thylakoid membrane biogenesis. Involved in the repair of PSII following damaged incurred during photoinhibition. Forms a complex with VAR1. Mutants show a variegated phenotype, which decreases during development. Transcript and protein levels increase with light intensity.; VARIEGATED 2 (VAR2); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity, zinc ion binding; INVOLVED IN: photoinhibition, oxygen and reactive oxygen species metabolic process, thylakoid membrane organization, PSII associated light-harvesting complex II catabolic process, protein catabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 8 (TAIR:AT1G06430.1); Has 42824 Blast hits to 40381 proteins in 3333 species: Archae - 1597; Bacteria - 18199; Metazoa - 4991; Fungi - 3835; Plants - 3350; Viruses - 34; Other Eukaryotes - 10818 (source: NCBI BLink). & (gnl|cdd|35950 : 479.0) no description available & (gnl|cdd|30813 : 464.0) no description available & (o82150|ftsh_tobac : 348.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (reliability: 1336.0) & (original description: Putative fstH, Description = ATP-dependent zinc metalloprotease FtsH, PFAM = PF00004;PF00004;PF01434)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf03150_539815-547984' '(at1g13270 : 519.0) Encodes a methionine aminopeptidase formerly called MAP1B, renamed to MAP1C.; methionine aminopeptidase 1B (MAP1C); FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, N-terminal protein amino acid modification; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24, structural domain (InterPro:IPR000994), Peptidase M24A, methionine aminopeptidase, subfamily 1 (InterPro:IPR002467), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 1C (TAIR:AT3G25740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37949 : 479.0) no description available & (gnl|cdd|29971 : 355.0) no description available & (reliability: 1038.0) & (original description: Putative MAP1B, Description = Methionine aminopeptidase 1B, chloroplastic, PFAM = PF00557)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf03595_1864265-1868281' '(at3g04340 : 333.0) embryo defective 2458 (emb2458); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, metalloendopeptidase activity, nucleotide binding, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1); Has 32899 Blast hits to 29484 proteins in 3073 species: Archae - 1598; Bacteria - 9893; Metazoa - 6215; Fungi - 3644; Plants - 2880; Viruses - 25; Other Eukaryotes - 8644 (source: NCBI BLink). & (reliability: 666.0) & (original description: Putative FTSHI5, Description = AtFTSHI5, PFAM = )' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf03595_1874140-1932865' '(at3g04340 : 1274.0) embryo defective 2458 (emb2458); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, metalloendopeptidase activity, nucleotide binding, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1); Has 32899 Blast hits to 29484 proteins in 3073 species: Archae - 1598; Bacteria - 9893; Metazoa - 6215; Fungi - 3644; Plants - 2880; Viruses - 25; Other Eukaryotes - 8644 (source: NCBI BLink). & (gnl|cdd|35950 : 342.0) no description available & (q5z974|ftsh_orysa : 194.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (gnl|cdd|30812 : 158.0) no description available & (reliability: 2548.0) & (original description: Putative ftsH, Description = FTSH extracellular protease family protein, PFAM = PF01434;PF00004)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf03723_417201-420637' '(at2g32480 : 502.0) Metalloprotease essential for plastid development. Located in the inner membrane of chloroplasts.; ARABIDOPSIS SERIN PROTEASE (ARASP); FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis, chloroplast organization; LOCATED IN: chloroplast, plastid, chloroplast inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M50 (InterPro:IPR008915), PDZ/DHR/GLGF (InterPro:IPR001478), Peptidase M50, putative membrane-associated zinc metallopeptidase (InterPro:IPR004387); BEST Arabidopsis thaliana protein match is: Peptidase M50 family protein (TAIR:AT1G05140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|31093 : 139.0) no description available & (reliability: 1004.0) & (original description: Putative ARASP, Description = Membrane metalloprotease ARASP, chloroplastic, PFAM = PF02163)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf04388_101763-126217' '(at2g41790 : 1429.0) Insulinase (Peptidase family M16) family protein; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) family protein (TAIR:AT3G57470.2); Has 9660 Blast hits to 9541 proteins in 2186 species: Archae - 9; Bacteria - 6247; Metazoa - 831; Fungi - 633; Plants - 271; Viruses - 3; Other Eukaryotes - 1666 (source: NCBI BLink). & (gnl|cdd|36177 : 1028.0) no description available & (gnl|cdd|31228 : 707.0) no description available & (reliability: 2858.0) & (original description: Putative PXM16, Description = Insulin-degrading enzyme-like 1, peroxisomal, PFAM = PF16187;PF05193;PF05193;PF00675)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf04703_647765-664215' '(at2g45240 : 691.0) Encodes a cytoplasmic MAP1 like methionine aminopeptidase which is involved in removing the N-terminal methionine from proteins. Induced mutants using RNAi technology which knocks out both MAP1 and MAP2 like genes show abnormal development.; methionine aminopeptidase 1A (MAP1A); FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity, zinc ion binding; INVOLVED IN: protein processing, N-terminal protein amino acid modification; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), Peptidase M24, structural domain (InterPro:IPR000994), Peptidase M24A, methionine aminopeptidase, subfamily 1 (InterPro:IPR002467), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 1B (TAIR:AT1G13270.1); Has 18085 Blast hits to 18064 proteins in 2832 species: Archae - 403; Bacteria - 12111; Metazoa - 396; Fungi - 241; Plants - 256; Viruses - 0; Other Eukaryotes - 4678 (source: NCBI BLink). & (gnl|cdd|37949 : 567.0) no description available & (gnl|cdd|29971 : 374.0) no description available & (reliability: 1382.0) & (original description: Putative MAP1, Description = Methionine aminopeptidase 1, PFAM = PF15801;PF00557)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf05295_414721-433483' '(at1g79560 : 1484.0) Encodes an FtsH protease that is localized to the chloroplast. Mutations in this locus result in embryo lethality.; FTSH protease 12 (FTSH12); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35950 : 445.0) no description available & (gnl|cdd|30813 : 294.0) no description available & (q9bae0|ftsh_medsa : 261.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Medicago sativa (Alfalfa) & (reliability: 2968.0) & (original description: Putative FTSH12, Description = ATP-dependent zinc metalloprotease FTSH 12, chloroplastic, PFAM = PF00004;PF01434)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf05368_263162-274340' '(at1g07510 : 1046.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 10 (ftsh10); FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 3 (TAIR:AT2G29080.1); Has 37747 Blast hits to 35440 proteins in 3262 species: Archae - 1533; Bacteria - 14237; Metazoa - 4767; Fungi - 3643; Plants - 3223; Viruses - 27; Other Eukaryotes - 10317 (source: NCBI BLink). & (gnl|cdd|35950 : 759.0) no description available & (gnl|cdd|30813 : 575.0) no description available & (q5z974|ftsh_orysa : 411.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 2092.0) & (original description: Putative FTSH10, Description = ATP-dependent zinc metalloprotease FTSH 10, mitochondrial, PFAM = PF00004;PF01434;PF06480)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf05592_74267-81270' '(at5g42320 : 504.0) Zn-dependent exopeptidases superfamily protein; FUNCTIONS IN: metallocarboxypeptidase activity, zinc ion binding; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M14, carboxypeptidase A (InterPro:IPR000834); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37861 : 199.0) no description available & (gnl|cdd|47908 : 162.0) no description available & (reliability: 1008.0) & (original description: Putative BnaCnng56540D, Description = BnaA09g15930D protein, PFAM = PF00246)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf06033_66814-102856' '(at2g41790 : 1421.0) Insulinase (Peptidase family M16) family protein; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) family protein (TAIR:AT3G57470.2); Has 9660 Blast hits to 9541 proteins in 2186 species: Archae - 9; Bacteria - 6247; Metazoa - 831; Fungi - 633; Plants - 271; Viruses - 3; Other Eukaryotes - 1666 (source: NCBI BLink). & (gnl|cdd|36177 : 1023.0) no description available & (gnl|cdd|31228 : 710.0) no description available & (reliability: 2842.0) & (original description: Putative At3g57470, Description = Insulin-degrading enzyme-like 2, PFAM = PF16187;PF00675;PF05193;PF05193)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf06050_165106-261107' '(at3g04340 : 1585.0) embryo defective 2458 (emb2458); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, metalloendopeptidase activity, nucleotide binding, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1); Has 32899 Blast hits to 29484 proteins in 3073 species: Archae - 1598; Bacteria - 9893; Metazoa - 6215; Fungi - 3644; Plants - 2880; Viruses - 25; Other Eukaryotes - 8644 (source: NCBI BLink). & (gnl|cdd|35950 : 341.0) no description available & (q5z974|ftsh_orysa : 193.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (gnl|cdd|30813 : 157.0) no description available & (reliability: 3170.0) & (original description: Putative FTSHI5, Description = Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic, PFAM = PF01434;PF00004)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf06081_371583-384647' '(at2g26140 : 883.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 4 (ftsh4); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, plastid, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: FTSH protease 11 (TAIR:AT5G53170.1); Has 39775 Blast hits to 37259 proteins in 3240 species: Archae - 1584; Bacteria - 15744; Metazoa - 5149; Fungi - 3764; Plants - 3335; Viruses - 40; Other Eukaryotes - 10159 (source: NCBI BLink). & (gnl|cdd|35953 : 787.0) no description available & (gnl|cdd|30813 : 550.0) no description available & (q5z974|ftsh_orysa : 351.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 1766.0) & (original description: Putative FTSH5, Description = ATP-dependent zinc metalloprotease FTSH 5, mitochondrial, PFAM = PF00004;PF01434)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf06504_264875-273763' '(at4g23940 : 1205.0) FtsH extracellular protease family; FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT2G30950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35950 : 473.0) no description available & (gnl|cdd|30813 : 378.0) no description available & (q5z974|ftsh_orysa : 269.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 2410.0) & (original description: Putative FTSHI1, Description = Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic, PFAM = PF01434;PF00004)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf06662_247912-250979' '(at2g45040 : 342.0) Matrixin family protein; FUNCTIONS IN: metallopeptidase activity, metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis, metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase M10, metallopeptidase (InterPro:IPR001818), Peptidoglycan binding-like (InterPro:IPR002477), Peptidase M10A, matrix metallopeptidase (InterPro:IPR021190), Peptidase, metallopeptidase (InterPro:IPR006026); BEST Arabidopsis thaliana protein match is: Matrixin family protein (TAIR:AT4G16640.1); Has 2623 Blast hits to 2423 proteins in 190 species: Archae - 2; Bacteria - 81; Metazoa - 2217; Fungi - 5; Plants - 182; Viruses - 44; Other Eukaryotes - 92 (source: NCBI BLink). & (p29136|mep1_soybn : 228.0) Metalloendoproteinase 1 precursor (EC 3.4.24.-) (SMEP1) - Glycine max (Soybean) & (gnl|cdd|36778 : 208.0) no description available & (gnl|cdd|84759 : 188.0) no description available & (reliability: 684.0) & (original description: Putative 4MMP, Description = Metalloendoproteinase 4-MMP, PFAM = PF00413;PF01471)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf07436_81109-86432' '(at5g15250 : 919.0) Encodes an FtsH protease that is localized to the chloroplast. AtFtsH6 is involved in the degradation of both Lhcb3 and Lhcb1 during senescence and high-light acclimation.; FTSH protease 6 (FTSH6); CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41, FtsH extracellular (InterPro:IPR011546), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT2G30950.1). & (gnl|cdd|30813 : 636.0) no description available & (gnl|cdd|35950 : 621.0) no description available & (q5z974|ftsh_orysa : 493.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 1838.0) & (original description: Putative FTSH6, Description = ATP-dependent zinc metalloprotease FTSH 6, chloroplastic, PFAM = PF01434;PF00004)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf07437_604888-608303' '(at1g24140 : 414.0) Matrixin family protein; FUNCTIONS IN: metallopeptidase activity, metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis, metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M10, metallopeptidase (InterPro:IPR001818), Peptidoglycan binding-like (InterPro:IPR002477), Peptidase M10A, cysteine switch, zinc binding site (InterPro:IPR021158), Peptidase M10A, matrix metallopeptidase (InterPro:IPR021190), Peptidase, metallopeptidase (InterPro:IPR006026); BEST Arabidopsis thaliana protein match is: matrix metalloproteinase (TAIR:AT1G70170.1); Has 2621 Blast hits to 2428 proteins in 195 species: Archae - 3; Bacteria - 89; Metazoa - 2200; Fungi - 4; Plants - 185; Viruses - 42; Other Eukaryotes - 98 (source: NCBI BLink). & (p29136|mep1_soybn : 259.0) Metalloendoproteinase 1 precursor (EC 3.4.24.-) (SMEP1) - Glycine max (Soybean) & (gnl|cdd|36778 : 216.0) no description available & (gnl|cdd|84759 : 194.0) no description available & (reliability: 828.0) & (original description: Putative 3MMP, Description = Metalloendoproteinase 3-MMP, PFAM = PF01471;PF00413)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf09998_189944-198581' '(at5g35690 : 357.0) CONTAINS InterPro DOMAIN/s: WLM (InterPro:IPR013536), PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G55915.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|40039 : 195.0) no description available & (gnl|cdd|71757 : 155.0) no description available & (reliability: 714.0) & (original description: Putative TCM_002216, Description = Ubiquitin and WLM domain-containing protein C1442.07c, putative, PFAM = PF09409;PF08325)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf10289_15745-42042' '(at2g41790 : 1278.0) Insulinase (Peptidase family M16) family protein; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) family protein (TAIR:AT3G57470.2); Has 9660 Blast hits to 9541 proteins in 2186 species: Archae - 9; Bacteria - 6247; Metazoa - 831; Fungi - 633; Plants - 271; Viruses - 3; Other Eukaryotes - 1666 (source: NCBI BLink). & (gnl|cdd|36177 : 962.0) no description available & (gnl|cdd|31228 : 688.0) no description available & (reliability: 2556.0) & (original description: Putative PXM16, Description = Insulin-degrading enzyme-like 1, peroxisomal, PFAM = PF00675;PF16187;PF05193;PF05193)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf10336_170059-173053' '(at1g24140 : 417.0) Matrixin family protein; FUNCTIONS IN: metallopeptidase activity, metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis, metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M10, metallopeptidase (InterPro:IPR001818), Peptidoglycan binding-like (InterPro:IPR002477), Peptidase M10A, cysteine switch, zinc binding site (InterPro:IPR021158), Peptidase M10A, matrix metallopeptidase (InterPro:IPR021190), Peptidase, metallopeptidase (InterPro:IPR006026); BEST Arabidopsis thaliana protein match is: matrix metalloproteinase (TAIR:AT1G70170.1); Has 2621 Blast hits to 2428 proteins in 195 species: Archae - 3; Bacteria - 89; Metazoa - 2200; Fungi - 4; Plants - 185; Viruses - 42; Other Eukaryotes - 98 (source: NCBI BLink). & (p29136|mep1_soybn : 253.0) Metalloendoproteinase 1 precursor (EC 3.4.24.-) (SMEP1) - Glycine max (Soybean) & (gnl|cdd|36778 : 219.0) no description available & (gnl|cdd|84759 : 192.0) no description available & (reliability: 834.0) & (original description: Putative 3MMP, Description = Metalloendoproteinase 3-MMP, PFAM = PF01471;PF00413)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf10743_91539-95123' '(at4g16640 : 340.0) Matrixin family protein; FUNCTIONS IN: metallopeptidase activity, metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis, metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase M10, metallopeptidase (InterPro:IPR001818), Peptidoglycan binding-like (InterPro:IPR002477), Peptidase M10A, matrix metallopeptidase (InterPro:IPR021190), Peptidase, metallopeptidase (InterPro:IPR006026); BEST Arabidopsis thaliana protein match is: Matrixin family protein (TAIR:AT2G45040.1); Has 2701 Blast hits to 2501 proteins in 212 species: Archae - 6; Bacteria - 141; Metazoa - 2219; Fungi - 5; Plants - 183; Viruses - 44; Other Eukaryotes - 103 (source: NCBI BLink). & (p29136|mep1_soybn : 219.0) Metalloendoproteinase 1 precursor (EC 3.4.24.-) (SMEP1) - Glycine max (Soybean) & (gnl|cdd|36778 : 209.0) no description available & (gnl|cdd|84759 : 191.0) no description available & (reliability: 680.0) & (original description: Putative 1MMP, Description = Metalloendoproteinase 1-MMP, PFAM = PF01471;PF00413)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf11361_284965-289040' '(at2g45240 : 146.0) Encodes a cytoplasmic MAP1 like methionine aminopeptidase which is involved in removing the N-terminal methionine from proteins. Induced mutants using RNAi technology which knocks out both MAP1 and MAP2 like genes show abnormal development.; methionine aminopeptidase 1A (MAP1A); FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity, zinc ion binding; INVOLVED IN: protein processing, N-terminal protein amino acid modification; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), Peptidase M24, structural domain (InterPro:IPR000994), Peptidase M24A, methionine aminopeptidase, subfamily 1 (InterPro:IPR002467), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 1B (TAIR:AT1G13270.1); Has 18085 Blast hits to 18064 proteins in 2832 species: Archae - 403; Bacteria - 12111; Metazoa - 396; Fungi - 241; Plants - 256; Viruses - 0; Other Eukaryotes - 4678 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative MAP1, Description = Peptidase M 1, PFAM = PF15801)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf11715_19653-36043' '(at2g20725 : 192.0) CAAX amino terminal protease family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: CAAX amino terminal protease family protein (TAIR:AT1G14270.1); Has 2599 Blast hits to 2599 proteins in 824 species: Archae - 26; Bacteria - 2240; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 200 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative At2g20725, Description = CAAX amino terminal protease family protein, PFAM = PF02517)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf12676_46928-63302' '(at3g47060 : 983.0) encodes an FtsH protease that is localized to the chloroplast; FTSH protease 7 (ftsh7); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 9 (TAIR:AT5G58870.1); Has 41243 Blast hits to 38738 proteins in 3322 species: Archae - 1531; Bacteria - 17472; Metazoa - 4873; Fungi - 3612; Plants - 3353; Viruses - 32; Other Eukaryotes - 10370 (source: NCBI BLink). & (gnl|cdd|35950 : 607.0) no description available & (gnl|cdd|30813 : 502.0) no description available & (q9bae0|ftsh_medsa : 343.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Medicago sativa (Alfalfa) & (reliability: 1966.0) & (original description: Putative FTSH9, Description = ATP-dependent zinc metalloprotease FTSH 9, chloroplastic, PFAM = PF01434;PF00004;PF06480)' T '29.5.7' 'protein.degradation.metalloprotease' 'niben101scf24482_95191-102075' '(at1g17870 : 726.0) S2P-like putative metalloprotease, also contain transmembrane helices near their C-termini and many of them, five of seven, contain a conserved zinc-binding motif HEXXH. Homolog of EGY1. Each of the EGY1 and EGY-like proteins share two additional highly conserved motifs, the previously reported NPDG motif (aa 442ñ454 in EGY1, Rudner et al., 1999) and a newly defined GNLR motif (aa 171ñ179 in EGY1). The GNLR motif is a novel signature motif unique to EGY1 and EGY-like proteins as well as other EGY1 orthologs found in cyanobacteria.; ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN-LIKE 3 (EGY3); INVOLVED IN: response to high light intensity, response to hydrogen peroxide, response to heat; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: Peptidase M50 family protein (TAIR:AT5G35220.1); Has 660 Blast hits to 652 proteins in 203 species: Archae - 107; Bacteria - 240; Metazoa - 53; Fungi - 13; Plants - 117; Viruses - 1; Other Eukaryotes - 129 (source: NCBI BLink). & (reliability: 1452.0) & (original description: Putative EGY3, Description = Probable zinc metallopeptidase EGY3, chloroplastic, PFAM = )' T '29.5.9' 'protein.degradation.AAA type' 'nbv0.3scaffold10446_1-3242' '(at2g46620 : 483.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G28580.1); Has 14567 Blast hits to 13858 proteins in 2196 species: Archae - 1075; Bacteria - 5270; Metazoa - 1990; Fungi - 1931; Plants - 1602; Viruses - 18; Other Eukaryotes - 2681 (source: NCBI BLink). & (gnl|cdd|35962 : 363.0) no description available & (reliability: 966.0) & (original description: Putative At2g46620, Description = AAA-ATPase At2g46620, PFAM = PF14363;PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'nbv0.3scaffold10708_10410-14841' '(gnl|cdd|35962 : 491.0) no description available & (at5g17740 : 429.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G17730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84432 : 92.0) no description available & (reliability: 858.0) & (original description: Putative At5g17760, Description = AAA-ATPase At5g17760, PFAM = PF00004;PF14363)' T '29.5.9' 'protein.degradation.AAA type' 'nbv0.3scaffold17164_16310-37068' '(at4g02480 : 855.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), SMAD/FHA domain (InterPro:IPR008984), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G02890.1); Has 36961 Blast hits to 32268 proteins in 3150 species: Archae - 1594; Bacteria - 13825; Metazoa - 4872; Fungi - 3636; Plants - 2887; Viruses - 35; Other Eukaryotes - 10112 (source: NCBI BLink). & (gnl|cdd|35956 : 126.0) no description available & (reliability: 1710.0) & (original description: Putative Sb08g023323, Description = Putative uncharacterized protein Sb08g023323, PFAM = PF00498)' T '29.5.9' 'protein.degradation.AAA type' 'nbv0.3scaffold28434_72-6978' '(at2g27600 : 743.0) Encodes a SKD1 (Suppressor of K+ Transport Growth Defect1) homolog. Localized to the cytoplasm and to multivesicular endosomes. Involved in multivesicular endosome function.; SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1 (SKD1); FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: vesicle-mediated transport, endosome organization; LOCATED IN: cytoplasm, multivesicular body; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Vps4 oligomerisation, C-terminal (InterPro:IPR015415), MIT (InterPro:IPR007330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G80350.1); Has 30691 Blast hits to 28172 proteins in 3117 species: Archae - 1476; Bacteria - 10868; Metazoa - 5113; Fungi - 3519; Plants - 2854; Viruses - 27; Other Eukaryotes - 6834 (source: NCBI BLink). & (gnl|cdd|35958 : 660.0) no description available & (gnl|cdd|30812 : 231.0) no description available & (p54774|cdc48_soybn : 172.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 1486.0) & (original description: Putative VPS4, Description = Vacuolar protein-sorting-associated protein 4, PFAM = PF04212;PF00004;PF09336)' T '29.5.9' 'protein.degradation.AAA type' 'nbv0.3scaffold36094_715-21447' '(at1g04730 : 794.0) Necessary for sister chromatid cohesion. Acts in synergy with ETG1.; CHROMOSOME TRANSMISSION FIDELITY 18 (CTF18); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: sister chromatid cohesion; LOCATED IN: replication fork; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: replication factor C1 (TAIR:AT5G22010.1); Has 4018 Blast hits to 4006 proteins in 709 species: Archae - 400; Bacteria - 666; Metazoa - 673; Fungi - 766; Plants - 379; Viruses - 21; Other Eukaryotes - 1113 (source: NCBI BLink). & (gnl|cdd|37180 : 469.0) no description available & (gnl|cdd|81320 : 154.0) no description available & (reliability: 1588.0) & (original description: Putative BnaA10g02880D, Description = BnaA10g02880D protein, PFAM = PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'nbv0.3scaffold46842_3955-7445' '(at5g57480 : 718.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G25835.1); Has 17733 Blast hits to 16589 proteins in 2814 species: Archae - 1008; Bacteria - 6904; Metazoa - 2230; Fungi - 2111; Plants - 1942; Viruses - 24; Other Eukaryotes - 3514 (source: NCBI BLink). & (gnl|cdd|35962 : 536.0) no description available & (gnl|cdd|84432 : 80.4) no description available & (reliability: 1436.0) & (original description: Putative At5g57480, Description = AAA-ATPase At5g57480, PFAM = PF00004;PF14363)' T '29.5.9' 'protein.degradation.AAA type' 'nbv0.3scaffold47227_1-11710' '(at1g50140 : 339.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G19740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 678.0) & (original description: Putative At1g50140, Description = ATPase family AAA domain-containing protein 1-A, PFAM = )' T '29.5.9' 'protein.degradation.AAA type' 'nbv0.3scaffold69199_4931-9491' '(at3g19740 : 323.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G50140.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35956 : 243.0) no description available & (gnl|cdd|30812 : 128.0) no description available & (p54774|cdc48_soybn : 104.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 646.0) & (original description: Putative At1g02890, Description = Spastin, PFAM = PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'nbv0.3scaffold74582_1392-3878' '(at4g02480 : 145.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), SMAD/FHA domain (InterPro:IPR008984), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G02890.1); Has 36961 Blast hits to 32268 proteins in 3150 species: Archae - 1594; Bacteria - 13825; Metazoa - 4872; Fungi - 3636; Plants - 2887; Viruses - 35; Other Eukaryotes - 10112 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative At1g02890, Description = AAA-type ATPase family protein, PFAM = )' T '29.5.9' 'protein.degradation.AAA type' 'nbv0.3scaffold89362_1816-4707' '(at3g01610 : 155.0) AAA-type ATPase - Over 90% homologous to CDC48a; cell division cycle 48C (CDC48C); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 65227 Blast hits to 39412 proteins in 3299 species: Archae - 1912; Bacteria - 27659; Metazoa - 8516; Fungi - 6329; Plants - 5583; Viruses - 58; Other Eukaryotes - 15170 (source: NCBI BLink). & (gnl|cdd|35952 : 115.0) no description available & (gnl|cdd|81248 : 85.3) no description available & (q96372|cdc48_capan : 80.1) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 310.0) & (original description: Putative NVL, Description = Cell division control 48-C-like protein, PFAM = PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'nbv0.5scaffold47_1133018-1136379' '(at4g02480 : 333.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), SMAD/FHA domain (InterPro:IPR008984), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G02890.1); Has 36961 Blast hits to 32268 proteins in 3150 species: Archae - 1594; Bacteria - 13825; Metazoa - 4872; Fungi - 3636; Plants - 2887; Viruses - 35; Other Eukaryotes - 10112 (source: NCBI BLink). & (gnl|cdd|35956 : 301.0) no description available & (gnl|cdd|84432 : 133.0) no description available & (p54774|cdc48_soybn : 100.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 666.0) & (original description: Putative At1g02890, Description = Spastin, PFAM = PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'nbv0.5scaffold74_6535-9321' '(gnl|cdd|35960 : 137.0) no description available & (at4g04910 : 109.0) N-ethylmaleimide sensitive factor; N-ethylmaleimide sensitive factor (NSF); FUNCTIONS IN: protein binding; LOCATED IN: vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338); BEST Arabidopsis thaliana protein match is: cell division cycle 48 (TAIR:AT3G09840.1); Has 30539 Blast hits to 27448 proteins in 3106 species: Archae - 1540; Bacteria - 10808; Metazoa - 4854; Fungi - 3637; Plants - 2891; Viruses - 27; Other Eukaryotes - 6782 (source: NCBI BLink). & (gnl|cdd|84432 : 93.1) no description available & (reliability: 218.0) & (original description: Putative , Description = , PFAM = PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'nbv0.5scaffold76_953247-975471' '(at4g02480 : 1017.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), SMAD/FHA domain (InterPro:IPR008984), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G02890.1); Has 36961 Blast hits to 32268 proteins in 3150 species: Archae - 1594; Bacteria - 13825; Metazoa - 4872; Fungi - 3636; Plants - 2887; Viruses - 35; Other Eukaryotes - 10112 (source: NCBI BLink). & (gnl|cdd|35956 : 542.0) no description available & (gnl|cdd|30812 : 241.0) no description available & (p54774|cdc48_soybn : 161.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 2034.0) & (original description: Putative BnaA10g01490D, Description = BnaA10g01490D protein, PFAM = PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'nbv0.5scaffold156_75190-86161' '(gnl|cdd|35961 : 831.0) no description available & (at2g18330 : 790.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Protein of unknown function DUF3523 (InterPro:IPR021911); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT4G36580.1); Has 47815 Blast hits to 38452 proteins in 3171 species: Archae - 1435; Bacteria - 14558; Metazoa - 11715; Fungi - 4870; Plants - 3045; Viruses - 138; Other Eukaryotes - 12054 (source: NCBI BLink). & (gnl|cdd|84432 : 118.0) no description available & (reliability: 1580.0) & (original description: Putative BnaA09g09620D, Description = BnaA09g09620D protein, PFAM = PF00004;PF12037)' T '29.5.9' 'protein.degradation.AAA type' 'nbv0.5scaffold683_99606-118625' '(at3g19740 : 295.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G50140.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 590.0) & (original description: Putative At1g50140, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = )' T '29.5.9' 'protein.degradation.AAA type' 'nbv0.5scaffold2144_110306-114105' '(gnl|cdd|35962 : 541.0) no description available & (at2g18193 : 493.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G18190.1); Has 23461 Blast hits to 21735 proteins in 2869 species: Archae - 1360; Bacteria - 7764; Metazoa - 3767; Fungi - 3122; Plants - 2740; Viruses - 37; Other Eukaryotes - 4671 (source: NCBI BLink). & (gnl|cdd|84432 : 82.0) no description available & (reliability: 986.0) & (original description: Putative At2g18193, Description = AAA-ATPase At2g18193, PFAM = PF14363;PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'nbv0.5scaffold3769_7534-32335' '(at1g02890 : 1152.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), SMAD/FHA domain (InterPro:IPR008984); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT4G02480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35956 : 271.0) no description available & (gnl|cdd|84432 : 95.4) no description available & (reliability: 2304.0) & (original description: Putative Sb08g023323, Description = Putative uncharacterized protein Sb08g023323, PFAM = PF00004;PF00498)' T '29.5.9' 'protein.degradation.AAA type' 'nbv0.5scaffold5198_65036-78986' '(at3g01610 : 738.0) AAA-type ATPase - Over 90% homologous to CDC48a; cell division cycle 48C (CDC48C); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 65227 Blast hits to 39412 proteins in 3299 species: Archae - 1912; Bacteria - 27659; Metazoa - 8516; Fungi - 6329; Plants - 5583; Viruses - 58; Other Eukaryotes - 15170 (source: NCBI BLink). & (gnl|cdd|35952 : 717.0) no description available & (p54774|cdc48_soybn : 466.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (gnl|cdd|30812 : 363.0) no description available & (reliability: 1476.0) & (original description: Putative CDC48C, Description = Cell division control protein 48 homolog C, PFAM = PF00004;PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'nbv0.5scaffold6867_23019-38211' '(at4g04910 : 820.0) N-ethylmaleimide sensitive factor; N-ethylmaleimide sensitive factor (NSF); FUNCTIONS IN: protein binding; LOCATED IN: vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338); BEST Arabidopsis thaliana protein match is: cell division cycle 48 (TAIR:AT3G09840.1); Has 30539 Blast hits to 27448 proteins in 3106 species: Archae - 1540; Bacteria - 10808; Metazoa - 4854; Fungi - 3637; Plants - 2891; Viruses - 27; Other Eukaryotes - 6782 (source: NCBI BLink). & (gnl|cdd|35960 : 655.0) no description available & (gnl|cdd|30812 : 198.0) no description available & (p54774|cdc48_soybn : 168.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 1640.0) & (original description: Putative comt, Description = Vesicle-fusing ATPase, PFAM = PF02933;PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben044scf00001889ctg019_1-8808' '(at4g28000 : 958.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G52882.1); Has 39856 Blast hits to 37451 proteins in 3236 species: Archae - 1544; Bacteria - 17865; Metazoa - 4891; Fungi - 3526; Plants - 3328; Viruses - 34; Other Eukaryotes - 8668 (source: NCBI BLink). & (gnl|cdd|35956 : 433.0) no description available & (gnl|cdd|30812 : 223.0) no description available & (p54774|cdc48_soybn : 175.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 1916.0) & (original description: Putative At4g28000, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben044scf00003202ctg006_43112-52748' '(at2g45500 : 420.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), MIT (InterPro:IPR007330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G27120.1); Has 35832 Blast hits to 33399 proteins in 3215 species: Archae - 1489; Bacteria - 15370; Metazoa - 4981; Fungi - 3599; Plants - 2905; Viruses - 24; Other Eukaryotes - 7464 (source: NCBI BLink). & (gnl|cdd|35959 : 263.0) no description available & (gnl|cdd|30812 : 176.0) no description available & (p46465|prs6a_orysa : 123.0) 26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1) - Oryza sativa (Rice) & (reliability: 840.0) & (original description: Putative spas, Description = Spastin, PFAM = PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben044scf00005011ctg007_1-2747' '(at2g46620 : 566.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G28580.1); Has 14567 Blast hits to 13858 proteins in 2196 species: Archae - 1075; Bacteria - 5270; Metazoa - 1990; Fungi - 1931; Plants - 1602; Viruses - 18; Other Eukaryotes - 2681 (source: NCBI BLink). & (gnl|cdd|35962 : 351.0) no description available & (gnl|cdd|30812 : 84.1) no description available & (reliability: 1132.0) & (original description: Putative ACRE102, Description = Avr9/Cf-9 rapidly elicited protein 102, PFAM = PF14363;PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben044scf00005943ctg004_17140-22270' '(at4g04180 : 275.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: mitochondrion; EXPRESSED IN: shoot apex, embryo, flower, pedicel, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G45000.1); Has 31547 Blast hits to 29327 proteins in 3060 species: Archae - 1473; Bacteria - 12216; Metazoa - 4656; Fungi - 3754; Plants - 2675; Viruses - 24; Other Eukaryotes - 6749 (source: NCBI BLink). & (gnl|cdd|35949 : 87.3) no description available & (reliability: 550.0) & (original description: Putative At4g04180, Description = AAA-type ATPase isoform 1, PFAM = )' T '29.5.9' 'protein.degradation.AAA type' 'niben044scf00005943ctg007_199-4066' '(at4g04180 : 275.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: mitochondrion; EXPRESSED IN: shoot apex, embryo, flower, pedicel, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G45000.1); Has 31547 Blast hits to 29327 proteins in 3060 species: Archae - 1473; Bacteria - 12216; Metazoa - 4656; Fungi - 3754; Plants - 2675; Viruses - 24; Other Eukaryotes - 6749 (source: NCBI BLink). & (gnl|cdd|35949 : 181.0) no description available & (gnl|cdd|84432 : 124.0) no description available & (p46466|prs4_orysa : 90.5) 26S protease regulatory subunit 4 homolog (TAT-binding protein homolog 2) - Oryza sativa (Rice) & (reliability: 550.0) & (original description: Putative EMIHUDRAFT_65013, Description = ATPase family associated with various cellular activities, PFAM = PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben044scf00009697ctg005_39129-47035' '(at3g01610 : 716.0) AAA-type ATPase - Over 90% homologous to CDC48a; cell division cycle 48C (CDC48C); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 65227 Blast hits to 39412 proteins in 3299 species: Archae - 1912; Bacteria - 27659; Metazoa - 8516; Fungi - 6329; Plants - 5583; Viruses - 58; Other Eukaryotes - 15170 (source: NCBI BLink). & (gnl|cdd|35952 : 711.0) no description available & (p54774|cdc48_soybn : 466.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (gnl|cdd|30812 : 362.0) no description available & (reliability: 1432.0) & (original description: Putative CDC48C, Description = Cell division control protein 48 homolog C, PFAM = PF00004;PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben044scf00011408ctg013_146-7547' '(gnl|cdd|35961 : 816.0) no description available & (at3g03060 : 814.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATPase activity, zinc ion binding; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), Protein of unknown function DUF3523 (InterPro:IPR021911); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT5G16930.1); Has 38046 Blast hits to 31515 proteins in 3061 species: Archae - 1414; Bacteria - 11706; Metazoa - 8052; Fungi - 4459; Plants - 2737; Viruses - 110; Other Eukaryotes - 9568 (source: NCBI BLink). & (gnl|cdd|84432 : 108.0) no description available & (reliability: 1604.0) & (original description: Putative atad-3, Description = ATPase family AAA domain-containing protein 3, PFAM = PF12037;PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben044scf00012157ctg011_1531-4152' '(at1g03000 : 207.0) Encodes an apparent ATPase similar to yeast and human protein required for peroxisomal biogenesis. May facilitate recycling of PEX5, the peroxisomal matrix protein receptor, and thereby promote peroxisomal matrix protein import.; peroxin 6 (PEX6); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein import into peroxisome matrix, fatty acid beta-oxidation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 36036 Blast hits to 31766 proteins in 3165 species: Archae - 1626; Bacteria - 13920; Metazoa - 5344; Fungi - 4031; Plants - 3389; Viruses - 33; Other Eukaryotes - 7693 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative pex6, Description = Peroxisome biogenesis-like protein, PFAM = )' T '29.5.9' 'protein.degradation.AAA type' 'niben044scf00013646ctg009_28770-31213' '(gnl|cdd|35962 : 169.0) no description available & (at3g50940 : 154.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: cytochrome BC1 synthesis (TAIR:AT3G50930.1); Has 22184 Blast hits to 20506 proteins in 2862 species: Archae - 1312; Bacteria - 7436; Metazoa - 3634; Fungi - 2857; Plants - 2601; Viruses - 34; Other Eukaryotes - 4310 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative BCS1, Description = Putative mitochondrial chaperone bcs1, PFAM = PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben044scf00015863ctg004_4225-21898' '(at1g02890 : 1047.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), SMAD/FHA domain (InterPro:IPR008984); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT4G02480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35956 : 545.0) no description available & (gnl|cdd|30812 : 240.0) no description available & (q96372|cdc48_capan : 177.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 2094.0) & (original description: Putative At4g02480, Description = AAA-type ATPase family protein, PFAM = PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben044scf00016392ctg013_146-6161' '(at1g02890 : 297.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), SMAD/FHA domain (InterPro:IPR008984); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT4G02480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 594.0) & (original description: Putative At1g02890, Description = AAA-type ATPase family protein, PFAM = PF00498)' T '29.5.9' 'protein.degradation.AAA type' 'niben044scf00017275ctg017_12117-17714' '(at3g50930 : 548.0) cytochrome BC1 synthesis (BCS1); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G50940.1); Has 21434 Blast hits to 19763 proteins in 2733 species: Archae - 1352; Bacteria - 7111; Metazoa - 3538; Fungi - 2773; Plants - 2474; Viruses - 30; Other Eukaryotes - 4156 (source: NCBI BLink). & (gnl|cdd|35962 : 521.0) no description available & (gnl|cdd|84432 : 82.3) no description available & (reliability: 1096.0) & (original description: Putative HSR4, Description = Protein HYPER-SENSITIVITY-RELATED 4, PFAM = PF14363;PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben044scf00018988ctg003_2683-6300' '(at1g50140 : 296.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G19740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35956 : 234.0) no description available & (gnl|cdd|30812 : 97.9) no description available & (reliability: 592.0) & (original description: Putative Os02g0749150, Description = Os02g0749150 protein, PFAM = PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben044scf00020449ctg003_4967-14289' '(at1g04730 : 431.0) Necessary for sister chromatid cohesion. Acts in synergy with ETG1.; CHROMOSOME TRANSMISSION FIDELITY 18 (CTF18); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: sister chromatid cohesion; LOCATED IN: replication fork; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: replication factor C1 (TAIR:AT5G22010.1); Has 4018 Blast hits to 4006 proteins in 709 species: Archae - 400; Bacteria - 666; Metazoa - 673; Fungi - 766; Plants - 379; Viruses - 21; Other Eukaryotes - 1113 (source: NCBI BLink). & (gnl|cdd|37180 : 199.0) no description available & (reliability: 862.0) & (original description: Putative CTF18, Description = Os03g0264800 protein, PFAM = )' T '29.5.9' 'protein.degradation.AAA type' 'niben044scf00024074ctg011_1-9991' '(at1g07510 : 1094.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 10 (ftsh10); FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 3 (TAIR:AT2G29080.1); Has 37747 Blast hits to 35440 proteins in 3262 species: Archae - 1533; Bacteria - 14237; Metazoa - 4767; Fungi - 3643; Plants - 3223; Viruses - 27; Other Eukaryotes - 10317 (source: NCBI BLink). & (gnl|cdd|35950 : 763.0) no description available & (gnl|cdd|30813 : 578.0) no description available & (q5z974|ftsh_orysa : 419.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 2150.0) & (original description: Putative FTSH10, Description = ATP-dependent zinc metalloprotease FTSH 10, mitochondrial, PFAM = PF00004;PF06480;PF01434)' T '29.5.9' 'protein.degradation.AAA type' 'niben044scf00024136ctg010_1-2349' '(at4g02480 : 305.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), SMAD/FHA domain (InterPro:IPR008984), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G02890.1); Has 36961 Blast hits to 32268 proteins in 3150 species: Archae - 1594; Bacteria - 13825; Metazoa - 4872; Fungi - 3636; Plants - 2887; Viruses - 35; Other Eukaryotes - 10112 (source: NCBI BLink). & (gnl|cdd|35956 : 273.0) no description available & (gnl|cdd|84432 : 119.0) no description available & (p54774|cdc48_soybn : 93.2) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 610.0) & (original description: Putative At1g02890, Description = Spastin, PFAM = PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben044scf00027068ctg022_1-5135' '(at2g29080 : 912.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 3 (ftsh3); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 10 (TAIR:AT1G07510.1); Has 42068 Blast hits to 39734 proteins in 3332 species: Archae - 1581; Bacteria - 17420; Metazoa - 4814; Fungi - 3774; Plants - 3280; Viruses - 30; Other Eukaryotes - 11169 (source: NCBI BLink). & (gnl|cdd|35950 : 679.0) no description available & (gnl|cdd|30813 : 532.0) no description available & (q5z974|ftsh_orysa : 401.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 1824.0) & (original description: Putative ftsH, Description = AFG3-like protein 2, PFAM = PF00004;PF06480;PF01434)' T '29.5.9' 'protein.degradation.AAA type' 'niben044scf00028890ctg000_1-4662' '(at4g04910 : 874.0) N-ethylmaleimide sensitive factor; N-ethylmaleimide sensitive factor (NSF); FUNCTIONS IN: protein binding; LOCATED IN: vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338); BEST Arabidopsis thaliana protein match is: cell division cycle 48 (TAIR:AT3G09840.1); Has 30539 Blast hits to 27448 proteins in 3106 species: Archae - 1540; Bacteria - 10808; Metazoa - 4854; Fungi - 3637; Plants - 2891; Viruses - 27; Other Eukaryotes - 6782 (source: NCBI BLink). & (gnl|cdd|35960 : 757.0) no description available & (gnl|cdd|30812 : 194.0) no description available & (p54774|cdc48_soybn : 179.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 1748.0) & (original description: Putative 21577, Description = Predicted protein, PFAM = PF00004;PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben044scf00029429ctg000_1-3478' '(at5g57480 : 728.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G25835.1); Has 17733 Blast hits to 16589 proteins in 2814 species: Archae - 1008; Bacteria - 6904; Metazoa - 2230; Fungi - 2111; Plants - 1942; Viruses - 24; Other Eukaryotes - 3514 (source: NCBI BLink). & (gnl|cdd|35962 : 547.0) no description available & (gnl|cdd|84432 : 83.5) no description available & (reliability: 1456.0) & (original description: Putative At5g57480, Description = AAA-ATPase At5g57480, PFAM = PF14363;PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben044scf00033141ctg000_1-3220' '(at5g64580 : 330.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, metalloendopeptidase activity, nucleotide binding, ATP binding; INVOLVED IN: embryo development; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1); Has 43409 Blast hits to 41131 proteins in 3311 species: Archae - 1622; Bacteria - 19384; Metazoa - 4934; Fungi - 3903; Plants - 3224; Viruses - 61; Other Eukaryotes - 10281 (source: NCBI BLink). & (reliability: 660.0) & (original description: Putative FTSHI4, Description = ATP-dependent zinc metalloprotease FTSH, PFAM = )' T '29.5.9' 'protein.degradation.AAA type' 'niben044scf00033141ctg001_1-7758' '(at5g64580 : 610.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, metalloendopeptidase activity, nucleotide binding, ATP binding; INVOLVED IN: embryo development; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1); Has 43409 Blast hits to 41131 proteins in 3311 species: Archae - 1622; Bacteria - 19384; Metazoa - 4934; Fungi - 3903; Plants - 3224; Viruses - 61; Other Eukaryotes - 10281 (source: NCBI BLink). & (gnl|cdd|35950 : 365.0) no description available & (gnl|cdd|30813 : 276.0) no description available & (o82150|ftsh_tobac : 266.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (reliability: 1220.0) & (original description: Putative ftsH, Description = ATP-dependent zinc metalloprotease FtsH, PFAM = PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben044scf00033141ctg004_1-2568' '(at5g64580 : 344.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, metalloendopeptidase activity, nucleotide binding, ATP binding; INVOLVED IN: embryo development; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1); Has 43409 Blast hits to 41131 proteins in 3311 species: Archae - 1622; Bacteria - 19384; Metazoa - 4934; Fungi - 3903; Plants - 3224; Viruses - 61; Other Eukaryotes - 10281 (source: NCBI BLink). & (reliability: 688.0) & (original description: Putative FTSHI4, Description = ATP-dependent zinc metalloprotease FTSH, PFAM = )' T '29.5.9' 'protein.degradation.AAA type' 'niben044scf00053606ctg002_1-3416' '(at3g28580 : 518.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: AAA-ATPase 1 (TAIR:AT5G40010.1); Has 26015 Blast hits to 22183 proteins in 2894 species: Archae - 1297; Bacteria - 7409; Metazoa - 4737; Fungi - 2999; Plants - 2564; Viruses - 69; Other Eukaryotes - 6940 (source: NCBI BLink). & (gnl|cdd|35962 : 518.0) no description available & (reliability: 1036.0) & (original description: Putative AATP1, Description = AAA-ATPase ASD, mitochondrial, PFAM = PF00004;PF14363)' T '29.5.9' 'protein.degradation.AAA type' 'niben044scf00061768ctg001_1-3702' '(at4g04910 : 181.0) N-ethylmaleimide sensitive factor; N-ethylmaleimide sensitive factor (NSF); FUNCTIONS IN: protein binding; LOCATED IN: vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338); BEST Arabidopsis thaliana protein match is: cell division cycle 48 (TAIR:AT3G09840.1); Has 30539 Blast hits to 27448 proteins in 3106 species: Archae - 1540; Bacteria - 10808; Metazoa - 4854; Fungi - 3637; Plants - 2891; Viruses - 27; Other Eukaryotes - 6782 (source: NCBI BLink). & (gnl|cdd|35960 : 95.4) no description available & (reliability: 362.0) & (original description: Putative NSF, Description = Vesicle-fusing ATPase, PFAM = )' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf00073_661226-674823' '(gnl|cdd|35960 : 222.0) no description available & (at4g04910 : 193.0) N-ethylmaleimide sensitive factor; N-ethylmaleimide sensitive factor (NSF); FUNCTIONS IN: protein binding; LOCATED IN: vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338); BEST Arabidopsis thaliana protein match is: cell division cycle 48 (TAIR:AT3G09840.1); Has 30539 Blast hits to 27448 proteins in 3106 species: Archae - 1540; Bacteria - 10808; Metazoa - 4854; Fungi - 3637; Plants - 2891; Viruses - 27; Other Eukaryotes - 6782 (source: NCBI BLink). & (gnl|cdd|30812 : 171.0) no description available & (p54774|cdc48_soybn : 145.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 386.0) & (original description: Putative nsf, Description = Vesicle-fusing ATPase, PFAM = PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf00128_398579-402075' '(gnl|cdd|35962 : 517.0) no description available & (at3g28510 : 448.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, 4 leaf senescence stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G28540.1); Has 37676 Blast hits to 28869 proteins in 2974 species: Archae - 1302; Bacteria - 8814; Metazoa - 8958; Fungi - 4310; Plants - 3042; Viruses - 177; Other Eukaryotes - 11073 (source: NCBI BLink). & (gnl|cdd|84432 : 81.6) no description available & (reliability: 896.0) & (original description: Putative At3g28600, Description = AAA-ATPase At3g28600, PFAM = PF14363;PF00004;PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf00225_751717-755389' '(at2g46620 : 566.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G28580.1); Has 14567 Blast hits to 13858 proteins in 2196 species: Archae - 1075; Bacteria - 5270; Metazoa - 1990; Fungi - 1931; Plants - 1602; Viruses - 18; Other Eukaryotes - 2681 (source: NCBI BLink). & (gnl|cdd|35962 : 357.0) no description available & (gnl|cdd|30812 : 88.7) no description available & (reliability: 1132.0) & (original description: Putative At2g46620, Description = AAA-ATPase At2g46620, PFAM = PF14363;PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf00229_27887-40463' '(at1g07510 : 1071.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 10 (ftsh10); FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 3 (TAIR:AT2G29080.1); Has 37747 Blast hits to 35440 proteins in 3262 species: Archae - 1533; Bacteria - 14237; Metazoa - 4767; Fungi - 3643; Plants - 3223; Viruses - 27; Other Eukaryotes - 10317 (source: NCBI BLink). & (gnl|cdd|35950 : 764.0) no description available & (gnl|cdd|30813 : 579.0) no description available & (q5z974|ftsh_orysa : 417.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 2112.0) & (original description: Putative FTSH10, Description = ATP-dependent zinc metalloprotease FTSH 10, mitochondrial, PFAM = PF00004;PF01434;PF06480)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf00229_34176-37746' '(at1g07510 : 626.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 10 (ftsh10); FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 3 (TAIR:AT2G29080.1); Has 37747 Blast hits to 35440 proteins in 3262 species: Archae - 1533; Bacteria - 14237; Metazoa - 4767; Fungi - 3643; Plants - 3223; Viruses - 27; Other Eukaryotes - 10317 (source: NCBI BLink). & (gnl|cdd|35950 : 528.0) no description available & (gnl|cdd|30813 : 407.0) no description available & (o82150|ftsh_tobac : 296.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (reliability: 1244.0) & (original description: Putative ftsH, Description = AFG3 family protein, PFAM = PF06480;PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf00383_297132-300940' '(gnl|cdd|35962 : 539.0) no description available & (at2g18193 : 481.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G18190.1); Has 23461 Blast hits to 21735 proteins in 2869 species: Archae - 1360; Bacteria - 7764; Metazoa - 3767; Fungi - 3122; Plants - 2740; Viruses - 37; Other Eukaryotes - 4671 (source: NCBI BLink). & (gnl|cdd|84432 : 82.7) no description available & (reliability: 962.0) & (original description: Putative At2g18193, Description = AAA-ATPase At2g18193, PFAM = PF14363;PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf00425_305373-308842' '(gnl|cdd|35962 : 485.0) no description available & (at5g40010 : 467.0) AAA-ATPase 1 (AATP1); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; EXPRESSED IN: stem, inflorescence meristem, root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G28580.1); Has 35875 Blast hits to 26437 proteins in 2942 species: Archae - 1242; Bacteria - 8120; Metazoa - 8429; Fungi - 4077; Plants - 2736; Viruses - 205; Other Eukaryotes - 11066 (source: NCBI BLink). & (gnl|cdd|84432 : 85.0) no description available & (reliability: 934.0) & (original description: Putative NtAAA1, Description = Putative ATPase, PFAM = PF00004;PF14363)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf00558_99543-118609' '(at4g02480 : 1339.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), SMAD/FHA domain (InterPro:IPR008984), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G02890.1); Has 36961 Blast hits to 32268 proteins in 3150 species: Archae - 1594; Bacteria - 13825; Metazoa - 4872; Fungi - 3636; Plants - 2887; Viruses - 35; Other Eukaryotes - 10112 (source: NCBI BLink). & (gnl|cdd|35956 : 521.0) no description available & (gnl|cdd|30812 : 230.0) no description available & (p54774|cdc48_soybn : 166.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 2678.0) & (original description: Putative At4g02480, Description = AAA-type ATPase family protein, PFAM = PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf00815_140686-144242' '(gnl|cdd|35962 : 485.0) no description available & (at3g50940 : 450.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: cytochrome BC1 synthesis (TAIR:AT3G50930.1); Has 22184 Blast hits to 20506 proteins in 2862 species: Archae - 1312; Bacteria - 7436; Metazoa - 3634; Fungi - 2857; Plants - 2601; Viruses - 34; Other Eukaryotes - 4310 (source: NCBI BLink). & (gnl|cdd|84432 : 90.0) no description available & (reliability: 900.0) & (original description: Putative At3g50940, Description = AAA-ATPase At3g50940, PFAM = PF00004;PF14363)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf01063_542366-550077' '(at3g03060 : 816.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATPase activity, zinc ion binding; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), Protein of unknown function DUF3523 (InterPro:IPR021911); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT5G16930.1); Has 38046 Blast hits to 31515 proteins in 3061 species: Archae - 1414; Bacteria - 11706; Metazoa - 8052; Fungi - 4459; Plants - 2737; Viruses - 110; Other Eukaryotes - 9568 (source: NCBI BLink). & (gnl|cdd|35961 : 811.0) no description available & (gnl|cdd|84432 : 108.0) no description available & (reliability: 1598.0) & (original description: Putative At3g03060, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF00004;PF12037)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf01375_217183-232284' '(at4g28000 : 1026.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G52882.1); Has 39856 Blast hits to 37451 proteins in 3236 species: Archae - 1544; Bacteria - 17865; Metazoa - 4891; Fungi - 3526; Plants - 3328; Viruses - 34; Other Eukaryotes - 8668 (source: NCBI BLink). & (gnl|cdd|35956 : 468.0) no description available & (gnl|cdd|30812 : 226.0) no description available & (p54774|cdc48_soybn : 174.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 2052.0) & (original description: Putative At4g28000, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf01550_164421-167953' '(at2g46620 : 458.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G28580.1); Has 14567 Blast hits to 13858 proteins in 2196 species: Archae - 1075; Bacteria - 5270; Metazoa - 1990; Fungi - 1931; Plants - 1602; Viruses - 18; Other Eukaryotes - 2681 (source: NCBI BLink). & (gnl|cdd|35962 : 328.0) no description available & (reliability: 916.0) & (original description: Putative At2g46620, Description = AAA-ATPase At2g46620, PFAM = PF14363;PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf01798_1198886-1202360' '(at5g57480 : 703.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G25835.1); Has 17733 Blast hits to 16589 proteins in 2814 species: Archae - 1008; Bacteria - 6904; Metazoa - 2230; Fungi - 2111; Plants - 1942; Viruses - 24; Other Eukaryotes - 3514 (source: NCBI BLink). & (gnl|cdd|35962 : 542.0) no description available & (gnl|cdd|84432 : 83.5) no description available & (reliability: 1406.0) & (original description: Putative At5g57480, Description = AAA-ATPase At5g57480, PFAM = PF00004;PF14363)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf01876_257867-269473' '(at1g03000 : 1084.0) Encodes an apparent ATPase similar to yeast and human protein required for peroxisomal biogenesis. May facilitate recycling of PEX5, the peroxisomal matrix protein receptor, and thereby promote peroxisomal matrix protein import.; peroxin 6 (PEX6); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein import into peroxisome matrix, fatty acid beta-oxidation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 36036 Blast hits to 31766 proteins in 3165 species: Archae - 1626; Bacteria - 13920; Metazoa - 5344; Fungi - 4031; Plants - 3389; Viruses - 33; Other Eukaryotes - 7693 (source: NCBI BLink). & (gnl|cdd|35955 : 739.0) no description available & (p54774|cdc48_soybn : 294.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (gnl|cdd|30812 : 263.0) no description available & (reliability: 2168.0) & (original description: Putative PEX6, Description = Peroxisome biogenesis protein 6, PFAM = PF00004;PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf02433_325018-341230' '(at4g04180 : 293.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: mitochondrion; EXPRESSED IN: shoot apex, embryo, flower, pedicel, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G45000.1); Has 31547 Blast hits to 29327 proteins in 3060 species: Archae - 1473; Bacteria - 12216; Metazoa - 4656; Fungi - 3754; Plants - 2675; Viruses - 24; Other Eukaryotes - 6749 (source: NCBI BLink). & (gnl|cdd|35949 : 147.0) no description available & (reliability: 586.0) & (original description: Putative AlNc14C2G263, Description = 26s protease regulatory, PFAM = PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf03341_40372-47962' '(gnl|cdd|35961 : 826.0) no description available & (at3g03060 : 813.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATPase activity, zinc ion binding; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), Protein of unknown function DUF3523 (InterPro:IPR021911); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT5G16930.1); Has 38046 Blast hits to 31515 proteins in 3061 species: Archae - 1414; Bacteria - 11706; Metazoa - 8052; Fungi - 4459; Plants - 2737; Viruses - 110; Other Eukaryotes - 9568 (source: NCBI BLink). & (gnl|cdd|84432 : 108.0) no description available & (reliability: 1606.0) & (original description: Putative v1g165363, Description = Predicted protein, PFAM = PF00004;PF12037)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf03602_18299-112517' '(gnl|cdd|35962 : 494.0) no description available & (at3g50930 : 489.0) cytochrome BC1 synthesis (BCS1); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G50940.1); Has 21434 Blast hits to 19763 proteins in 2733 species: Archae - 1352; Bacteria - 7111; Metazoa - 3538; Fungi - 2773; Plants - 2474; Viruses - 30; Other Eukaryotes - 4156 (source: NCBI BLink). & (reliability: 978.0) & (original description: Putative HSR4, Description = Protein HYPER-SENSITIVITY-RELATED 4, PFAM = PF14363;PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf04352_93566-102801' '(at2g03670 : 748.0) CDC48 - like protein AAA-type ATPaseCell. division control protein 48 homolog B; cell division cycle 48B (CDC48B); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT3G53230.1); Has 56751 Blast hits to 29677 proteins in 3123 species: Archae - 2145; Bacteria - 19832; Metazoa - 8766; Fungi - 6476; Plants - 5731; Viruses - 66; Other Eukaryotes - 13735 (source: NCBI BLink). & (gnl|cdd|35949 : 590.0) no description available & (p54774|cdc48_soybn : 399.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (gnl|cdd|30812 : 390.0) no description available & (reliability: 1496.0) & (original description: Putative CDC48B, Description = Cell division control protein 48 homolog B, PFAM = PF00004;PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf04556_228629-232170' '(gnl|cdd|35962 : 433.0) no description available & (at4g25835 : 380.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G57480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 760.0) & (original description: Putative At4g25835, Description = AAA-ATPase At4g25835, PFAM = PF00004;PF14363)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf04582_176656-182208' '(at2g27600 : 720.0) Encodes a SKD1 (Suppressor of K+ Transport Growth Defect1) homolog. Localized to the cytoplasm and to multivesicular endosomes. Involved in multivesicular endosome function.; SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1 (SKD1); FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: vesicle-mediated transport, endosome organization; LOCATED IN: cytoplasm, multivesicular body; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Vps4 oligomerisation, C-terminal (InterPro:IPR015415), MIT (InterPro:IPR007330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G80350.1); Has 30691 Blast hits to 28172 proteins in 3117 species: Archae - 1476; Bacteria - 10868; Metazoa - 5113; Fungi - 3519; Plants - 2854; Viruses - 27; Other Eukaryotes - 6834 (source: NCBI BLink). & (gnl|cdd|35958 : 643.0) no description available & (gnl|cdd|30812 : 235.0) no description available & (p54774|cdc48_soybn : 173.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 1440.0) & (original description: Putative SKD1, Description = Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1, PFAM = PF04212;PF09336;PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf04623_27791-31937' '(at4g02480 : 236.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), SMAD/FHA domain (InterPro:IPR008984), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G02890.1); Has 36961 Blast hits to 32268 proteins in 3150 species: Archae - 1594; Bacteria - 13825; Metazoa - 4872; Fungi - 3636; Plants - 2887; Viruses - 35; Other Eukaryotes - 10112 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative At1g02890, Description = AAA-type ATPase family protein, PFAM = )' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf04989_141424-160325' '(at4g04910 : 1222.0) N-ethylmaleimide sensitive factor; N-ethylmaleimide sensitive factor (NSF); FUNCTIONS IN: protein binding; LOCATED IN: vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338); BEST Arabidopsis thaliana protein match is: cell division cycle 48 (TAIR:AT3G09840.1); Has 30539 Blast hits to 27448 proteins in 3106 species: Archae - 1540; Bacteria - 10808; Metazoa - 4854; Fungi - 3637; Plants - 2891; Viruses - 27; Other Eukaryotes - 6782 (source: NCBI BLink). & (gnl|cdd|35960 : 945.0) no description available & (gnl|cdd|30812 : 205.0) no description available & (p54774|cdc48_soybn : 181.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 2444.0) & (original description: Putative NSF, Description = Vesicle-fusing ATPase, PFAM = PF02933;PF00004;PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf05368_263162-274340' '(at1g07510 : 1046.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 10 (ftsh10); FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 3 (TAIR:AT2G29080.1); Has 37747 Blast hits to 35440 proteins in 3262 species: Archae - 1533; Bacteria - 14237; Metazoa - 4767; Fungi - 3643; Plants - 3223; Viruses - 27; Other Eukaryotes - 10317 (source: NCBI BLink). & (gnl|cdd|35950 : 759.0) no description available & (gnl|cdd|30813 : 575.0) no description available & (q5z974|ftsh_orysa : 411.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 2076.0) & (original description: Putative FTSH10, Description = ATP-dependent zinc metalloprotease FTSH 10, mitochondrial, PFAM = PF00004;PF01434;PF06480)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf05617_223900-227369' '(at2g46620 : 488.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G28580.1); Has 14567 Blast hits to 13858 proteins in 2196 species: Archae - 1075; Bacteria - 5270; Metazoa - 1990; Fungi - 1931; Plants - 1602; Viruses - 18; Other Eukaryotes - 2681 (source: NCBI BLink). & (gnl|cdd|35962 : 363.0) no description available & (reliability: 976.0) & (original description: Putative At2g46620, Description = AAA-ATPase At2g46620, PFAM = PF14363;PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf05698_218205-226899' '(at2g27600 : 743.0) Encodes a SKD1 (Suppressor of K+ Transport Growth Defect1) homolog. Localized to the cytoplasm and to multivesicular endosomes. Involved in multivesicular endosome function.; SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1 (SKD1); FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: vesicle-mediated transport, endosome organization; LOCATED IN: cytoplasm, multivesicular body; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Vps4 oligomerisation, C-terminal (InterPro:IPR015415), MIT (InterPro:IPR007330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G80350.1); Has 30691 Blast hits to 28172 proteins in 3117 species: Archae - 1476; Bacteria - 10868; Metazoa - 5113; Fungi - 3519; Plants - 2854; Viruses - 27; Other Eukaryotes - 6834 (source: NCBI BLink). & (gnl|cdd|35958 : 660.0) no description available & (gnl|cdd|30812 : 232.0) no description available & (p54774|cdc48_soybn : 172.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 1486.0) & (original description: Putative SKD1, Description = Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1, PFAM = PF04212;PF00004;PF09336)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf05948_116201-120154' '(gnl|cdd|35960 : 202.0) no description available & (at4g04910 : 174.0) N-ethylmaleimide sensitive factor; N-ethylmaleimide sensitive factor (NSF); FUNCTIONS IN: protein binding; LOCATED IN: vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338); BEST Arabidopsis thaliana protein match is: cell division cycle 48 (TAIR:AT3G09840.1); Has 30539 Blast hits to 27448 proteins in 3106 species: Archae - 1540; Bacteria - 10808; Metazoa - 4854; Fungi - 3637; Plants - 2891; Viruses - 27; Other Eukaryotes - 6782 (source: NCBI BLink). & (gnl|cdd|31415 : 132.0) no description available & (p54774|cdc48_soybn : 120.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 348.0) & (original description: Putative NSF, Description = Vesicle-fusing ATPase, PFAM = PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf06050_375703-422184' '(at1g50140 : 683.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G19740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35956 : 476.0) no description available & (gnl|cdd|30812 : 223.0) no description available & (q96372|cdc48_capan : 168.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 1366.0) & (original description: Putative Sb10g007950, Description = Putative uncharacterized protein Sb10g007950, PFAM = PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf07058_432863-436931' '(gnl|cdd|35962 : 498.0) no description available & (at3g28580 : 485.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: AAA-ATPase 1 (TAIR:AT5G40010.1); Has 26015 Blast hits to 22183 proteins in 2894 species: Archae - 1297; Bacteria - 7409; Metazoa - 4737; Fungi - 2999; Plants - 2564; Viruses - 69; Other Eukaryotes - 6940 (source: NCBI BLink). & (reliability: 970.0) & (original description: Putative At3g28580, Description = AAA-ATPase At3g28580, PFAM = PF14363;PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf07201_240996-244588' '(at3g28580 : 547.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: AAA-ATPase 1 (TAIR:AT5G40010.1); Has 26015 Blast hits to 22183 proteins in 2894 species: Archae - 1297; Bacteria - 7409; Metazoa - 4737; Fungi - 2999; Plants - 2564; Viruses - 69; Other Eukaryotes - 6940 (source: NCBI BLink). & (gnl|cdd|35962 : 531.0) no description available & (reliability: 1094.0) & (original description: Putative At3g28580, Description = AAA-ATPase At3g28580, PFAM = PF14363;PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf07201_240999-244591' '(at3g28580 : 548.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: AAA-ATPase 1 (TAIR:AT5G40010.1); Has 26015 Blast hits to 22183 proteins in 2894 species: Archae - 1297; Bacteria - 7409; Metazoa - 4737; Fungi - 2999; Plants - 2564; Viruses - 69; Other Eukaryotes - 6940 (source: NCBI BLink). & (gnl|cdd|35962 : 531.0) no description available & (reliability: 1096.0) & (original description: Putative AATP1, Description = AAA-ATPase ASD, mitochondrial, PFAM = PF14363;PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf07287_308880-330020' '(gnl|cdd|35961 : 830.0) no description available & (at2g18330 : 792.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Protein of unknown function DUF3523 (InterPro:IPR021911); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT4G36580.1); Has 47815 Blast hits to 38452 proteins in 3171 species: Archae - 1435; Bacteria - 14558; Metazoa - 11715; Fungi - 4870; Plants - 3045; Viruses - 138; Other Eukaryotes - 12054 (source: NCBI BLink). & (gnl|cdd|84432 : 120.0) no description available & (reliability: 1584.0) & (original description: Putative BnaA09g09620D, Description = BnaA09g09620D protein, PFAM = PF12037;PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf07516_230834-244064' '(at2g45500 : 612.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), MIT (InterPro:IPR007330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G27120.1); Has 35832 Blast hits to 33399 proteins in 3215 species: Archae - 1489; Bacteria - 15370; Metazoa - 4981; Fungi - 3599; Plants - 2905; Viruses - 24; Other Eukaryotes - 7464 (source: NCBI BLink). & (gnl|cdd|35959 : 365.0) no description available & (gnl|cdd|30812 : 239.0) no description available & (q96372|cdc48_capan : 165.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 1224.0) & (original description: Putative SPAST, Description = Spastin, PFAM = PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf08643_334443-337827' '(gnl|cdd|35958 : 289.0) no description available & (at2g27600 : 280.0) Encodes a SKD1 (Suppressor of K+ Transport Growth Defect1) homolog. Localized to the cytoplasm and to multivesicular endosomes. Involved in multivesicular endosome function.; SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1 (SKD1); FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: vesicle-mediated transport, endosome organization; LOCATED IN: cytoplasm, multivesicular body; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Vps4 oligomerisation, C-terminal (InterPro:IPR015415), MIT (InterPro:IPR007330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G80350.1); Has 30691 Blast hits to 28172 proteins in 3117 species: Archae - 1476; Bacteria - 10868; Metazoa - 5113; Fungi - 3519; Plants - 2854; Viruses - 27; Other Eukaryotes - 6834 (source: NCBI BLink). & (gnl|cdd|30299 : 109.0) no description available & (reliability: 560.0) & (original description: Putative vps4, Description = Vacuolar protein sorting-associated protein 4, PFAM = PF00004;PF04212)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf09501_169632-196721' '(at4g02480 : 1305.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), SMAD/FHA domain (InterPro:IPR008984), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G02890.1); Has 36961 Blast hits to 32268 proteins in 3150 species: Archae - 1594; Bacteria - 13825; Metazoa - 4872; Fungi - 3636; Plants - 2887; Viruses - 35; Other Eukaryotes - 10112 (source: NCBI BLink). & (gnl|cdd|35956 : 513.0) no description available & (gnl|cdd|30812 : 213.0) no description available & (p54774|cdc48_soybn : 154.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 2610.0) & (original description: Putative At4g02480, Description = AAA-type ATPase family protein, PFAM = PF00498;PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf09544_73072-90028' '(at5g64580 : 1289.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, metalloendopeptidase activity, nucleotide binding, ATP binding; INVOLVED IN: embryo development; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1); Has 43409 Blast hits to 41131 proteins in 3311 species: Archae - 1622; Bacteria - 19384; Metazoa - 4934; Fungi - 3903; Plants - 3224; Viruses - 61; Other Eukaryotes - 10281 (source: NCBI BLink). & (gnl|cdd|35950 : 469.0) no description available & (gnl|cdd|30813 : 324.0) no description available & (o82150|ftsh_tobac : 292.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (reliability: 2578.0) & (original description: Putative FTSHI4, Description = Probable inactive ATP-dependent zinc metalloprotease FTSHI 4, chloroplastic, PFAM = PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf09590_125155-139476' '(at4g04180 : 581.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: mitochondrion; EXPRESSED IN: shoot apex, embryo, flower, pedicel, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G45000.1); Has 31547 Blast hits to 29327 proteins in 3060 species: Archae - 1473; Bacteria - 12216; Metazoa - 4656; Fungi - 3754; Plants - 2675; Viruses - 24; Other Eukaryotes - 6749 (source: NCBI BLink). & (gnl|cdd|35949 : 284.0) no description available & (gnl|cdd|30812 : 166.0) no description available & (p54778|prs6b_soltu : 134.0) 26S protease regulatory subunit 6B homolog - Solanum tuberosum (Potato) & (reliability: 1162.0) & (original description: Putative At4g04180, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf09620_135214-138689' '(at2g46620 : 489.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G28580.1); Has 14567 Blast hits to 13858 proteins in 2196 species: Archae - 1075; Bacteria - 5270; Metazoa - 1990; Fungi - 1931; Plants - 1602; Viruses - 18; Other Eukaryotes - 2681 (source: NCBI BLink). & (gnl|cdd|35962 : 370.0) no description available & (reliability: 978.0) & (original description: Putative At2g46620, Description = AAA-ATPase At2g46620, PFAM = PF14363;PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf10626_4951-31540' '(at1g04730 : 875.0) Necessary for sister chromatid cohesion. Acts in synergy with ETG1.; CHROMOSOME TRANSMISSION FIDELITY 18 (CTF18); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: sister chromatid cohesion; LOCATED IN: replication fork; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: replication factor C1 (TAIR:AT5G22010.1); Has 4018 Blast hits to 4006 proteins in 709 species: Archae - 400; Bacteria - 666; Metazoa - 673; Fungi - 766; Plants - 379; Viruses - 21; Other Eukaryotes - 1113 (source: NCBI BLink). & (gnl|cdd|37180 : 482.0) no description available & (gnl|cdd|81320 : 164.0) no description available & (reliability: 1750.0) & (original description: Putative CTF18, Description = Chromosome transmission fidelity protein 18, PFAM = PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf13394_46570-54747' '(at1g64110 : 1092.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G28000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35956 : 470.0) no description available & (gnl|cdd|30812 : 223.0) no description available & (p54774|cdc48_soybn : 180.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 2184.0) & (original description: Putative At1g64110, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF00004)' T '29.5.9' 'protein.degradation.AAA type' 'niben101scf22213_50778-53548' '(at2g27600 : 128.0) Encodes a SKD1 (Suppressor of K+ Transport Growth Defect1) homolog. Localized to the cytoplasm and to multivesicular endosomes. Involved in multivesicular endosome function.; SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1 (SKD1); FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: vesicle-mediated transport, endosome organization; LOCATED IN: cytoplasm, multivesicular body; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Vps4 oligomerisation, C-terminal (InterPro:IPR015415), MIT (InterPro:IPR007330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G80350.1); Has 30691 Blast hits to 28172 proteins in 3117 species: Archae - 1476; Bacteria - 10868; Metazoa - 5113; Fungi - 3519; Plants - 2854; Viruses - 27; Other Eukaryotes - 6834 (source: NCBI BLink). & (gnl|cdd|35958 : 111.0) no description available & (gnl|cdd|30299 : 96.4) no description available & (reliability: 256.0) & (original description: Putative SKD1, Description = Vacuolar protein sorting-associated protein 4, PFAM = PF04212;PF04212)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.3scaffold581_46794-52225' '(at1g16860 : 190.0) Ubiquitin-specific protease family C19-related protein; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: Ubiquitin-specific protease family C19-related protein (TAIR:AT1G78880.1); Has 605 Blast hits to 295 proteins in 85 species: Archae - 0; Bacteria - 22; Metazoa - 26; Fungi - 28; Plants - 169; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative PGSC0003DMG400000245, Description = Ubiquitin-specific protease family C19-related protein, PFAM = )' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.3scaffold2644_57872-67112' '(at3g15355 : 335.0) ubiquitin-conjugating enzyme 25 (UBC25); FUNCTIONS IN: small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein (TAIR:AT1G53025.1); Has 6168 Blast hits to 6144 proteins in 365 species: Archae - 0; Bacteria - 0; Metazoa - 2619; Fungi - 1243; Plants - 1332; Viruses - 17; Other Eukaryotes - 957 (source: NCBI BLink). & (gnl|cdd|36113 : 309.0) no description available & (gnl|cdd|29157 : 113.0) no description available & (reliability: 668.0) & (original description: Putative birc6, Description = Ubiquitin-conjugating enzyme E2 O, PFAM = PF00179)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.3scaffold4186_7562-16910' '(at2g17200 : 424.0) DSK2; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquilin (InterPro:IPR015496), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin family protein (TAIR:AT2G17190.1); Has 15379 Blast hits to 7776 proteins in 854 species: Archae - 6; Bacteria - 3440; Metazoa - 5160; Fungi - 1735; Plants - 2506; Viruses - 174; Other Eukaryotes - 2358 (source: NCBI BLink). & (gnl|cdd|35234 : 311.0) no description available & (gnl|cdd|29211 : 97.2) no description available & (reliability: 848.0) & (original description: Putative DSK2A, Description = Ubiquitin domain-containing protein DSK2a, PFAM = PF00240;PF00627)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.3scaffold7189_18661-24611' '(at1g17280 : 344.0) ubiquitin-conjugating enzyme 34 (UBC34); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 33 (TAIR:AT5G50430.2); Has 7599 Blast hits to 7596 proteins in 375 species: Archae - 0; Bacteria - 0; Metazoa - 3285; Fungi - 1587; Plants - 1489; Viruses - 20; Other Eukaryotes - 1218 (source: NCBI BLink). & (gnl|cdd|36112 : 322.0) no description available & (gnl|cdd|29157 : 135.0) no description available & (reliability: 688.0) & (original description: Putative UBC34, Description = Ubiquitin-conjugating enzyme E2 34, PFAM = PF00179)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.3scaffold13996_19572-41732' '(at5g06600 : 1757.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37074 : 828.0) no description available & (gnl|cdd|34681 : 629.0) no description available & (reliability: 3478.0) & (original description: Putative Sb03g035900, Description = Putative uncharacterized protein Sb03g035900, PFAM = PF14533;PF00443;PF00917;PF12436)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.3scaffold16642_23897-34780' '(at4g10570 : 1091.0) encodes a ubiquitin-specific protease family member, UBP9.; ubiquitin-specific protease 9 (UBP9); FUNCTIONS IN: cysteine-type endopeptidase activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin-specific peptidase, DUSP domain (InterPro:IPR006615), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 10 (TAIR:AT4G10590.1); Has 11569 Blast hits to 7616 proteins in 265 species: Archae - 0; Bacteria - 6; Metazoa - 6024; Fungi - 1995; Plants - 1380; Viruses - 8; Other Eukaryotes - 2156 (source: NCBI BLink). & (gnl|cdd|37081 : 657.0) no description available & (gnl|cdd|35119 : 449.0) no description available & (reliability: 2182.0) & (original description: Putative UBP10, Description = Ubiquitin carboxyl-terminal hydrolase 10, PFAM = PF06337;PF00443)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.3scaffold22912_21173-25831' '(at2g46500 : 760.0) Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. Phosphorylates PUFD1 and RPN10 in vitro.; phosphoinositide 4-kinase gamma 4 (PI4K GAMMA 4); CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase ;Ubiquitin family protein (TAIR:AT5G24240.1). & (gnl|cdd|37592 : 260.0) no description available & (gnl|cdd|84784 : 129.0) no description available & (reliability: 1520.0) & (original description: Putative PI4KG4, Description = Phosphatidylinositol 4-kinase gamma 4, PFAM = PF00240;PF00240;PF00454)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.3scaffold28913_1-8638' '(at2g17200 : 430.0) DSK2; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquilin (InterPro:IPR015496), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin family protein (TAIR:AT2G17190.1); Has 15379 Blast hits to 7776 proteins in 854 species: Archae - 6; Bacteria - 3440; Metazoa - 5160; Fungi - 1735; Plants - 2506; Viruses - 174; Other Eukaryotes - 2358 (source: NCBI BLink). & (gnl|cdd|35234 : 304.0) no description available & (gnl|cdd|29211 : 98.4) no description available & (reliability: 860.0) & (original description: Putative UBQ1, Description = Ubiquitin 1, PFAM = PF00240;PF00627)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.3scaffold33470_2593-11544' '(at2g16920 : 1089.0) ubiquitin-conjugating enzyme 23 (UBC23); FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: phosphate 2 (TAIR:AT2G33770.1); Has 13499 Blast hits to 9775 proteins in 506 species: Archae - 15; Bacteria - 1590; Metazoa - 4947; Fungi - 2194; Plants - 1786; Viruses - 166; Other Eukaryotes - 2801 (source: NCBI BLink). & (gnl|cdd|36113 : 701.0) no description available & (gnl|cdd|29157 : 110.0) no description available & (reliability: 2178.0) & (original description: Putative UBC23, Description = Probable ubiquitin-conjugating enzyme E2 23, PFAM = PF00179)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.3scaffold34902_1-8990' '(at1g19270 : 637.0) DA1 (DA1); CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Ubiquitin interacting motif (InterPro:IPR003903), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: LIM domain-containing protein (TAIR:AT4G36860.1); Has 3538 Blast hits to 2617 proteins in 167 species: Archae - 0; Bacteria - 18; Metazoa - 3009; Fungi - 63; Plants - 177; Viruses - 0; Other Eukaryotes - 271 (source: NCBI BLink). & (gnl|cdd|36916 : 241.0) no description available & (reliability: 1274.0) & (original description: Putative DA1, Description = Protein DA1, PFAM = PF00412;PF12315)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.3scaffold36284_1-5572' '(at2g21270 : 386.0) ubiquitin fusion degradation 1 (UFD1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin fusion degradation protein UFD1 (InterPro:IPR004854); BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT4G38930.2); Has 705 Blast hits to 703 proteins in 222 species: Archae - 8; Bacteria - 2; Metazoa - 165; Fungi - 211; Plants - 127; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (gnl|cdd|37027 : 372.0) no description available & (gnl|cdd|66804 : 283.0) no description available & (reliability: 772.0) & (original description: Putative UFD1L, Description = Ubiquitin fusion degradation protein 1 homolog, PFAM = PF03152)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.3scaffold37583_7239-14037' '(gnl|cdd|29216 : 165.0) no description available & (q6z8k4|mub3_orysa : 155.0) Membrane-anchored ubiquitin-fold protein 3 precursor (Membrane-anchored ub-fold protein 3) (OsMUB3) - Oryza sativa (Rice) & (at1g22050 : 142.0) membrane-anchored ubiquitin-fold protein 6 precursor (MUB6); CONTAINS InterPro DOMAIN/s: Membrane-anchored ubiquitin-fold protein, HCG-1 (InterPro:IPR017000), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: membrane-anchored ubiquitin-fold protein 5 precursor (TAIR:AT1G77870.1); Has 161 Blast hits to 161 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative MUB3, Description = Membrane-anchored ubiquitin-fold protein 3, PFAM = PF13881)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.3scaffold43170_6975-17960' '(at3g47910 : 1236.0) Ubiquitin carboxyl-terminal hydrolase-related protein; FUNCTIONS IN: ubiquitin thiolesterase activity, zinc ion binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF627 (InterPro:IPR006866), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), Zinc finger, C2H2-type (InterPro:IPR007087), Protein of unknown function DUF629 (InterPro:IPR006865); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase-related protein (TAIR:AT3G47890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37098 : 310.0) no description available & (gnl|cdd|84777 : 112.0) no description available & (reliability: 2472.0) & (original description: Putative At3g47890, Description = Putative uncharacterized protein At3g47890, PFAM = PF04780;PF00443;PF04781)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.3scaffold51541_9683-14612' '(at5g50870 : 301.0) ubiquitin-conjugating enzyme 27 (UBC27); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin conjugating enzyme 8 (TAIR:AT5G41700.4). & (gnl|cdd|35639 : 236.0) no description available & (gnl|cdd|29157 : 173.0) no description available & (p25866|ubc2_wheat : 97.8) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (reliability: 602.0) & (original description: Putative UBC27, Description = Ubiquitin-conjugating enzyme E2 27, PFAM = PF00627;PF00179)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.3scaffold66573_66-7316' '(at4g36860 : 199.0) LIM domain-containing protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Ubiquitin interacting motif (InterPro:IPR003903), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: DA1 (TAIR:AT1G19270.1); Has 6004 Blast hits to 4271 proteins in 323 species: Archae - 7; Bacteria - 228; Metazoa - 4096; Fungi - 190; Plants - 320; Viruses - 67; Other Eukaryotes - 1096 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative , Description = , PFAM = PF12315)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.3scaffold82777_561-6547' '(at4g36860 : 207.0) LIM domain-containing protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Ubiquitin interacting motif (InterPro:IPR003903), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: DA1 (TAIR:AT1G19270.1); Has 6004 Blast hits to 4271 proteins in 323 species: Archae - 7; Bacteria - 228; Metazoa - 4096; Fungi - 190; Plants - 320; Viruses - 67; Other Eukaryotes - 1096 (source: NCBI BLink). & (gnl|cdd|36916 : 86.4) no description available & (reliability: 406.0) & (original description: Putative , Description = , PFAM = PF12315)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.3scaffold92960_885-4980' '(at1g53025 : 358.0) Ubiquitin-conjugating enzyme family protein; FUNCTIONS IN: small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 25 (TAIR:AT3G15355.1). & (gnl|cdd|36113 : 323.0) no description available & (gnl|cdd|29157 : 115.0) no description available & (reliability: 716.0) & (original description: Putative UBC38, Description = Putative ubiquitin-conjugating enzyme E2 38, PFAM = PF00179)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.5scaffold300_419952-422834' '(at5g50870 : 88.2) ubiquitin-conjugating enzyme 27 (UBC27); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin conjugating enzyme 8 (TAIR:AT5G41700.4). & (reliability: 176.4) & (original description: Putative UBC1, Description = Ubiquitin-conjugating enzyme E2 27, PFAM = PF00179)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.5scaffold346_242263-288890' '(at5g06600 : 1691.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37074 : 759.0) no description available & (gnl|cdd|34681 : 584.0) no description available & (reliability: 3348.0) & (original description: Putative USP7, Description = Ubiquitin carboxyl-terminal hydrolase 12, PFAM = PF00917;PF14533;PF12436;PF12436;PF00443)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.5scaffold648_605279-612090' '(at1g71020 : 636.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G23030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q64ha9|spl11_orysa : 422.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 95.3) no description available & (gnl|cdd|39425 : 88.2) no description available & (reliability: 1272.0) & (original description: Putative PUB10, Description = U-box domain-containing protein 10, PFAM = PF04564;PF00514;PF00514)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.5scaffold650_452457-458514' '(at1g65650 : 486.0) UCH2; CONTAINS InterPro DOMAIN/s: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (InterPro:IPR001578), Ubiquitinyl hydrolase, UCH37 type (InterPro:IPR017390); BEST Arabidopsis thaliana protein match is: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (TAIR:AT5G16310.1); Has 1283 Blast hits to 1275 proteins in 236 species: Archae - 0; Bacteria - 0; Metazoa - 633; Fungi - 351; Plants - 143; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (gnl|cdd|37989 : 447.0) no description available & (gnl|cdd|85235 : 226.0) no description available & (reliability: 972.0) & (original description: Putative UCH2, Description = Ubiquitin carboxyl-terminal hydrolase 2, PFAM = PF01088)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.5scaffold658_409770-418894' '(at1g31340 : 265.0) Encodes a ubiquitin-related protein that is conjugated to target proteins by neddylation. It has been shown to be conjugated to the cullin AtCUL1. The RUB-conjugation pathway has been implicated in in auxin response.; related to ubiquitin 1 (RUB1); INVOLVED IN: protein modification process, response to auxin stimulus, protein neddylation, ethylene biosynthetic process, embryo development; LOCATED IN: plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 7 (TAIR:AT2G35635.1); Has 16064 Blast hits to 7349 proteins in 721 species: Archae - 0; Bacteria - 36; Metazoa - 7330; Fungi - 1879; Plants - 3570; Viruses - 331; Other Eukaryotes - 2918 (source: NCBI BLink). & (gnl|cdd|29205 : 138.0) no description available & (p69326|ubiq_wheat : 135.0) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|35228 : 135.0) no description available & (reliability: 530.0) & (original description: Putative RUB1, Description = Ubiquitin-NEDD8-like protein RUB1, PFAM = PF00240;PF00240)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.5scaffold1345_303621-317319' '(at5g15400 : 1515.0) U-box domain-containing protein; FUNCTIONS IN: ubiquitin-protein ligase activity, ubiquitin-ubiquitin ligase activity; INVOLVED IN: protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin conjugation factor E4, core (InterPro:IPR019474), U box domain (InterPro:IPR003613); Has 1036 Blast hits to 1011 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 503; Fungi - 218; Plants - 177; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|37253 : 754.0) no description available & (gnl|cdd|34716 : 367.0) no description available & (reliability: 3030.0) & (original description: Putative PUB1, Description = Probable ubiquitin conjugation factor E4, PFAM = PF04564;PF10408)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.5scaffold1742_3031-8397' '(at4g36860 : 207.0) LIM domain-containing protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Ubiquitin interacting motif (InterPro:IPR003903), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: DA1 (TAIR:AT1G19270.1); Has 6004 Blast hits to 4271 proteins in 323 species: Archae - 7; Bacteria - 228; Metazoa - 4096; Fungi - 190; Plants - 320; Viruses - 67; Other Eukaryotes - 1096 (source: NCBI BLink). & (gnl|cdd|36916 : 86.4) no description available & (reliability: 406.0) & (original description: Putative , Description = , PFAM = PF12315)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.5scaffold1880_310607-316472' '(at2g21270 : 344.0) ubiquitin fusion degradation 1 (UFD1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin fusion degradation protein UFD1 (InterPro:IPR004854); BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT4G38930.2); Has 705 Blast hits to 703 proteins in 222 species: Archae - 8; Bacteria - 2; Metazoa - 165; Fungi - 211; Plants - 127; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (gnl|cdd|37027 : 333.0) no description available & (gnl|cdd|66804 : 247.0) no description available & (reliability: 688.0) & (original description: Putative ufd1, Description = Ubiquitin fusion degradation protein 1 homolog, PFAM = PF03152)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.5scaffold2017_150473-179811' '(at5g02310 : 1584.0) Encodes PROTEOLYSIS6 (PRT6), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Another component of the N-end rule pathway is arginyl-tRNA:protein arginyltransferase (ATE). Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination.; proteolysis 6 (PRT6); CONTAINS InterPro DOMAIN/s: Zinc finger, N-recognin, metazoa (InterPro:IPR013993), Zinc finger, N-recognin (InterPro:IPR003126); Has 1893 Blast hits to 778 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 939; Fungi - 577; Plants - 100; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (gnl|cdd|36355 : 412.0) no description available & (gnl|cdd|47708 : 88.1) no description available & (reliability: 3168.0) & (original description: Putative BnaA03g54900D, Description = BnaA03g54900D protein, PFAM = PF02207)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.5scaffold3749_58643-84376' '(at5g06600 : 1761.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37074 : 824.0) no description available & (gnl|cdd|34681 : 625.0) no description available & (reliability: 3476.0) & (original description: Putative UBP12, Description = Ubiquitin specific protease 12, PFAM = PF12436;PF14533;PF00443;PF00917)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.5scaffold5533_137588-141507' '(at2g03890 : 827.0) Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains.; phosphoinositide 4-kinase gamma 7 (PI4K GAMMA 7); FUNCTIONS IN: inositol or phosphatidylinositol kinase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase family protein (TAIR:AT1G13640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37592 : 314.0) no description available & (gnl|cdd|84784 : 118.0) no description available & (reliability: 1566.0) & (original description: Putative PI4KG7, Description = Phosphatidylinositol 4-kinase gamma 7, PFAM = PF00454)' T '29.5.11' 'protein.degradation.ubiquitin' 'nbv0.5scaffold7421_940-15404' '(at3g47890 : 1561.0) Ubiquitin carboxyl-terminal hydrolase-related protein; FUNCTIONS IN: ubiquitin thiolesterase activity, zinc ion binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF627 (InterPro:IPR006866), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), Zinc finger, C2H2-type (InterPro:IPR007087), Protein of unknown function DUF629 (InterPro:IPR006865); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase-related protein (TAIR:AT3G47910.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37098 : 307.0) no description available & (gnl|cdd|84777 : 108.0) no description available & (reliability: 3122.0) & (original description: Putative At3g47890, Description = Putative uncharacterized protein At3g47890, PFAM = PF04780;PF00443;PF04781)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben044scf00000674ctg002_12956-15800' '(at5g50870 : 88.2) ubiquitin-conjugating enzyme 27 (UBC27); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin conjugating enzyme 8 (TAIR:AT5G41700.4). & (reliability: 176.4) & (original description: Putative UBC1, Description = Ubiquitin-conjugating enzyme E2 27, PFAM = PF00179)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben044scf00002679ctg007_203-5576' '(at1g71020 : 605.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G23030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q64ha9|spl11_orysa : 402.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 92.2) no description available & (gnl|cdd|39425 : 84.7) no description available & (reliability: 1210.0) & (original description: Putative PUB1, Description = Armadillo/beta-catenin repeat family protein, PFAM = PF04564;PF00514;PF00514)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben044scf00002939ctg002_4129-21179' '(at5g02310 : 1523.0) Encodes PROTEOLYSIS6 (PRT6), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Another component of the N-end rule pathway is arginyl-tRNA:protein arginyltransferase (ATE). Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination.; proteolysis 6 (PRT6); CONTAINS InterPro DOMAIN/s: Zinc finger, N-recognin, metazoa (InterPro:IPR013993), Zinc finger, N-recognin (InterPro:IPR003126); Has 1893 Blast hits to 778 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 939; Fungi - 577; Plants - 100; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (gnl|cdd|36355 : 414.0) no description available & (gnl|cdd|47708 : 88.1) no description available & (reliability: 3046.0) & (original description: Putative Os01g0148000, Description = Os01g0148000 protein, PFAM = PF02207)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben044scf00004894ctg008_370-13571' '(at4g31160 : 781.0) Encodes a DCAF/DWD protein capable of interacting with DDB1 and associating with CUL4, likely as part of a nuclear ubiquitin ligase complex. DCAF1 appears to be required for plant embryogenesis and to affect several other developmental processes including leaf, shoot, and flower development.; DDB1-CUL4 associated factor 1 (DCAF1); FUNCTIONS IN: nucleotide binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594); Has 5754 Blast hits to 3482 proteins in 410 species: Archae - 46; Bacteria - 1277; Metazoa - 1225; Fungi - 769; Plants - 278; Viruses - 87; Other Eukaryotes - 2072 (source: NCBI BLink). & (gnl|cdd|37043 : 511.0) no description available & (reliability: 1562.0) & (original description: Putative DCAF1, Description = DDB1-and CUL4-associated factor-like protein, PFAM = )' T '29.5.11' 'protein.degradation.ubiquitin' 'niben044scf00005203ctg022_8983-11608' '(at1g19270 : 137.0) DA1 (DA1); CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Ubiquitin interacting motif (InterPro:IPR003903), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: LIM domain-containing protein (TAIR:AT4G36860.1); Has 3538 Blast hits to 2617 proteins in 167 species: Archae - 0; Bacteria - 18; Metazoa - 3009; Fungi - 63; Plants - 177; Viruses - 0; Other Eukaryotes - 271 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative , Description = , PFAM = PF12315)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben044scf00005704ctg007_1-5336' '(at4g24560 : 283.0) Encodes a ubiquitin-specific protease. There is no evidence for a phenotype in ubp16-1 mutants, however, double mutant analysis with ubp15 mutants reveals a role for UBP16 in plant development and cell proliferation.; ubiquitin-specific protease 16 (UBP16); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity, zinc ion binding; INVOLVED IN: cell proliferation, flower development, shoot development, root development, leaf development; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 17 (TAIR:AT5G65450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37076 : 231.0) no description available & (gnl|cdd|73067 : 206.0) no description available & (reliability: 534.0) & (original description: Putative UBP15, Description = Ubiquitin carboxyl-terminal hydrolase 15, PFAM = PF00443)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben044scf00006116ctg000_1-8548' '(at2g17200 : 374.0) DSK2; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquilin (InterPro:IPR015496), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin family protein (TAIR:AT2G17190.1); Has 15379 Blast hits to 7776 proteins in 854 species: Archae - 6; Bacteria - 3440; Metazoa - 5160; Fungi - 1735; Plants - 2506; Viruses - 174; Other Eukaryotes - 2358 (source: NCBI BLink). & (gnl|cdd|35234 : 265.0) no description available & (gnl|cdd|29211 : 98.4) no description available & (reliability: 748.0) & (original description: Putative UBQ1, Description = Heat shock chaperonin-binding, PFAM = PF00240)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben044scf00011814ctg009_1-1364' '(at5g06600 : 133.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative UBP12, Description = Ubiquitin carboxyl-terminal hydrolase 12, PFAM = )' T '29.5.11' 'protein.degradation.ubiquitin' 'niben044scf00012642ctg007_1305-13222' '(at3g56740 : 355.0) Ubiquitin-associated (UBA) protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Der1-like (InterPro:IPR007599), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Ubiquitin-associated (UBA) protein (TAIR:AT2G41160.1); Has 305 Blast hits to 304 proteins in 119 species: Archae - 6; Bacteria - 5; Metazoa - 77; Fungi - 99; Plants - 90; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|39664 : 249.0) no description available & (reliability: 710.0) & (original description: Putative RBL20, Description = Rhomboid-like protein 20, PFAM = PF04511;PF00627)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben044scf00012989ctg044_2213-9088' '(at5g06600 : 724.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37074 : 388.0) no description available & (gnl|cdd|34681 : 363.0) no description available & (reliability: 1436.0) & (original description: Putative usp7, Description = Ubiquitin carboxyl-terminal hydrolase 12, PFAM = PF00917;PF00443)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben044scf00017378ctg001_1687-5734' '(at2g03890 : 865.0) Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains.; phosphoinositide 4-kinase gamma 7 (PI4K GAMMA 7); FUNCTIONS IN: inositol or phosphatidylinositol kinase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase family protein (TAIR:AT1G13640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37592 : 317.0) no description available & (gnl|cdd|84784 : 115.0) no description available & (reliability: 1634.0) & (original description: Putative pk, Description = Putative phosphatidylinositol 4-kinase type 2-beta, PFAM = PF00454)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben044scf00020488ctg012_20619-30670' '(at1g04850 : 468.0) ubiquitin-associated (UBA)/TS-N domain-containing protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567), Zinc finger, C2H2-type (InterPro:IPR007087), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48690.1); Has 9425 Blast hits to 9403 proteins in 278 species: Archae - 0; Bacteria - 0; Metazoa - 2591; Fungi - 765; Plants - 4746; Viruses - 72; Other Eukaryotes - 1251 (source: NCBI BLink). & (gnl|cdd|37910 : 234.0) no description available & (gnl|cdd|87954 : 82.7) no description available & (reliability: 936.0) & (original description: Putative Sb04g020490, Description = Putative uncharacterized protein Sb04g020490, PFAM = PF09409;PF00627)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben044scf00021998ctg010_2029-7664' '(gnl|cdd|36112 : 324.0) no description available & (at1g17280 : 317.0) ubiquitin-conjugating enzyme 34 (UBC34); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 33 (TAIR:AT5G50430.2); Has 7599 Blast hits to 7596 proteins in 375 species: Archae - 0; Bacteria - 0; Metazoa - 3285; Fungi - 1587; Plants - 1489; Viruses - 20; Other Eukaryotes - 1218 (source: NCBI BLink). & (gnl|cdd|29157 : 133.0) no description available & (reliability: 634.0) & (original description: Putative UBC34, Description = Ubiquitin-conjugating enzyme E2 34, PFAM = PF00179)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben044scf00036454ctg006_2190-9427' '(at2g12550 : 416.0) ubiquitin-associated (UBA)/TS-N domain-containing protein; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37772 : 337.0) no description available & (reliability: 832.0) & (original description: Putative glysoja_011639, Description = NEDD8 ultimate buster 1, PFAM = )' T '29.5.11' 'protein.degradation.ubiquitin' 'niben044scf00048537ctg010_7926-22835' '(at1g27750 : 488.0) nucleic acid binding; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Spen paralogue and orthologue SPOC, C-terminal (InterPro:IPR012921), RNA recognition motif, RNP-1 (InterPro:IPR000504); Has 48205 Blast hits to 29216 proteins in 1385 species: Archae - 84; Bacteria - 5862; Metazoa - 21406; Fungi - 6566; Plants - 7294; Viruses - 1352; Other Eukaryotes - 5641 (source: NCBI BLink). & (gnl|cdd|71185 : 80.0) no description available & (reliability: 976.0) & (original description: Putative glysoja_043854, Description = Nucleic acid binding, putative isoform 1, PFAM = PF07744)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben044scf00052219ctg009_1-3656' '(at1g31340 : 133.0) Encodes a ubiquitin-related protein that is conjugated to target proteins by neddylation. It has been shown to be conjugated to the cullin AtCUL1. The RUB-conjugation pathway has been implicated in in auxin response.; related to ubiquitin 1 (RUB1); INVOLVED IN: protein modification process, response to auxin stimulus, protein neddylation, ethylene biosynthetic process, embryo development; LOCATED IN: plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 7 (TAIR:AT2G35635.1); Has 16064 Blast hits to 7349 proteins in 721 species: Archae - 0; Bacteria - 36; Metazoa - 7330; Fungi - 1879; Plants - 3570; Viruses - 331; Other Eukaryotes - 2918 (source: NCBI BLink). & (p69326|ubiq_wheat : 89.4) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|29205 : 88.5) no description available & (gnl|cdd|35228 : 87.0) no description available & (reliability: 266.0) & (original description: Putative ubb, Description = Polyubiquitin, PFAM = PF00240;PF00240)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf00024_367990-379884' '(at3g47890 : 1502.0) Ubiquitin carboxyl-terminal hydrolase-related protein; FUNCTIONS IN: ubiquitin thiolesterase activity, zinc ion binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF627 (InterPro:IPR006866), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), Zinc finger, C2H2-type (InterPro:IPR007087), Protein of unknown function DUF629 (InterPro:IPR006865); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase-related protein (TAIR:AT3G47910.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37098 : 304.0) no description available & (gnl|cdd|68355 : 163.0) no description available & (reliability: 3004.0) & (original description: Putative PGSC0003DMG400013181, Description = Inactive ubiquitin carboxyl-terminal hydrolase 54, PFAM = PF04781;PF00443;PF04780)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf00087_509825-523125' '(at2g24640 : 646.0) ubiquitin-specific protease 19 (UBP19); FUNCTIONS IN: cysteine-type endopeptidase activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 18 (TAIR:AT4G31670.1). & (gnl|cdd|37076 : 451.0) no description available & (gnl|cdd|73067 : 433.0) no description available & (reliability: 1292.0) & (original description: Putative UBP19, Description = Ubiquitin carboxyl-terminal hydrolase 19, PFAM = PF00443;PF01753)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf00207_646854-666109' '(at3g11910 : 787.0) ubiquitin-specific protease 13 (UBP13); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 12 (TAIR:AT5G06600.2). & (gnl|cdd|37074 : 307.0) no description available & (gnl|cdd|34681 : 127.0) no description available & (reliability: 1574.0) & (original description: Putative USP7, Description = Ubiquitin carboxyl-terminal hydrolase 12, PFAM = PF14533;PF12436)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf00338_640323-649824' '(at5g50680 : 430.0) Encodes a protein that is part of a heterodimeric SUMO E1 activating enzyme.; SUMO activating enzyme 1B (SAE1B); CONTAINS InterPro DOMAIN/s: Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: SUMO-activating enzyme 1B (TAIR:AT5G50580.1); Has 4947 Blast hits to 4294 proteins in 1121 species: Archae - 94; Bacteria - 1869; Metazoa - 1154; Fungi - 667; Plants - 410; Viruses - 0; Other Eukaryotes - 753 (source: NCBI BLink). & (gnl|cdd|37225 : 313.0) no description available & (gnl|cdd|73271 : 178.0) no description available & (p20973|ube11_wheat : 82.0) Ubiquitin-activating enzyme E1 1 - Triticum aestivum (Wheat) & (reliability: 860.0) & (original description: Putative Sb53, Description = Pco115798, PFAM = PF00899)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf00410_82531-86657' '(at2g46500 : 658.0) Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. Phosphorylates PUFD1 and RPN10 in vitro.; phosphoinositide 4-kinase gamma 4 (PI4K GAMMA 4); CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase ;Ubiquitin family protein (TAIR:AT5G24240.1). & (gnl|cdd|37592 : 256.0) no description available & (gnl|cdd|84784 : 116.0) no description available & (reliability: 1316.0) & (original description: Putative PI4KG4, Description = Phosphatidylinositol 4-kinase gamma 4, PFAM = PF00454;PF00240)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf00466_176508-182373' '(at2g21270 : 365.0) ubiquitin fusion degradation 1 (UFD1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin fusion degradation protein UFD1 (InterPro:IPR004854); BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT4G38930.2); Has 705 Blast hits to 703 proteins in 222 species: Archae - 8; Bacteria - 2; Metazoa - 165; Fungi - 211; Plants - 127; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (gnl|cdd|37027 : 357.0) no description available & (gnl|cdd|66804 : 268.0) no description available & (reliability: 730.0) & (original description: Putative UFD1L, Description = Ubiquitin fusion degradation protein 1 homolog, PFAM = PF03152)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf00481_369852-388723' '(at3g56740 : 355.0) Ubiquitin-associated (UBA) protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Der1-like (InterPro:IPR007599), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Ubiquitin-associated (UBA) protein (TAIR:AT2G41160.1); Has 305 Blast hits to 304 proteins in 119 species: Archae - 6; Bacteria - 5; Metazoa - 77; Fungi - 99; Plants - 90; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|39664 : 252.0) no description available & (reliability: 710.0) & (original description: Putative RBL20, Description = Rhomboid-like protein 20, PFAM = PF01694;PF00627)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf00488_411877-423277' '(at3g47910 : 1537.0) Ubiquitin carboxyl-terminal hydrolase-related protein; FUNCTIONS IN: ubiquitin thiolesterase activity, zinc ion binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF627 (InterPro:IPR006866), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), Zinc finger, C2H2-type (InterPro:IPR007087), Protein of unknown function DUF629 (InterPro:IPR006865); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase-related protein (TAIR:AT3G47890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37098 : 310.0) no description available & (gnl|cdd|84777 : 112.0) no description available & (reliability: 3064.0) & (original description: Putative At3g47890, Description = Putative uncharacterized protein At3g47890, PFAM = PF04781;PF00443;PF04780)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf00585_359978-369326' '(at2g17200 : 398.0) DSK2; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquilin (InterPro:IPR015496), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin family protein (TAIR:AT2G17190.1); Has 15379 Blast hits to 7776 proteins in 854 species: Archae - 6; Bacteria - 3440; Metazoa - 5160; Fungi - 1735; Plants - 2506; Viruses - 174; Other Eukaryotes - 2358 (source: NCBI BLink). & (gnl|cdd|35234 : 293.0) no description available & (gnl|cdd|29211 : 96.8) no description available & (reliability: 796.0) & (original description: Putative UBQ1, Description = Heat shock chaperonin-binding, PFAM = PF00240;PF00627)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf00603_12320-16928' '(at2g46500 : 735.0) Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. Phosphorylates PUFD1 and RPN10 in vitro.; phosphoinositide 4-kinase gamma 4 (PI4K GAMMA 4); CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase ;Ubiquitin family protein (TAIR:AT5G24240.1). & (gnl|cdd|37592 : 262.0) no description available & (gnl|cdd|84784 : 134.0) no description available & (reliability: 1470.0) & (original description: Putative PI4KG4, Description = Phosphatidylinositol 4-kinase gamma 4, PFAM = PF00454;PF00240)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf00687_333078-335545' '(at2g47110 : 249.0) polyubiquitin gene; ubiquitin 6 (UBQ6); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: protein ubiquitination involved in ubiquitin-dependent protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: cytosolic small ribosomal subunit, intracellular; EXPRESSED IN: whole plant, male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ribosomal protein S27a (InterPro:IPR002906), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 5 (TAIR:AT3G62250.1). & (gnl|cdd|35228 : 225.0) no description available & (p69326|ubiq_wheat : 149.0) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|29205 : 147.0) no description available & (reliability: 498.0) & (original description: Putative r27a, Description = Ubiquitin-40S ribosomal protein S27a, PFAM = PF00240;PF01599)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf00833_300864-321342' '(gnl|cdd|29216 : 166.0) no description available & (q6z8k4|mub3_orysa : 155.0) Membrane-anchored ubiquitin-fold protein 3 precursor (Membrane-anchored ub-fold protein 3) (OsMUB3) - Oryza sativa (Rice) & (at1g22050 : 146.0) membrane-anchored ubiquitin-fold protein 6 precursor (MUB6); CONTAINS InterPro DOMAIN/s: Membrane-anchored ubiquitin-fold protein, HCG-1 (InterPro:IPR017000), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: membrane-anchored ubiquitin-fold protein 5 precursor (TAIR:AT1G77870.1); Has 161 Blast hits to 161 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative MUB3, Description = Membrane-anchored ubiquitin-fold protein 3, PFAM = PF13881)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf00870_230219-235479' '(at1g17280 : 329.0) ubiquitin-conjugating enzyme 34 (UBC34); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 33 (TAIR:AT5G50430.2); Has 7599 Blast hits to 7596 proteins in 375 species: Archae - 0; Bacteria - 0; Metazoa - 3285; Fungi - 1587; Plants - 1489; Viruses - 20; Other Eukaryotes - 1218 (source: NCBI BLink). & (gnl|cdd|36112 : 314.0) no description available & (gnl|cdd|29157 : 130.0) no description available & (reliability: 658.0) & (original description: Putative ubc6, Description = Ubiquitin-conjugating enzyme E2 6, PFAM = PF00179)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf00883_995958-1001536' '(at2g21270 : 417.0) ubiquitin fusion degradation 1 (UFD1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin fusion degradation protein UFD1 (InterPro:IPR004854); BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT4G38930.2); Has 705 Blast hits to 703 proteins in 222 species: Archae - 8; Bacteria - 2; Metazoa - 165; Fungi - 211; Plants - 127; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (gnl|cdd|37027 : 370.0) no description available & (gnl|cdd|66804 : 283.0) no description available & (reliability: 834.0) & (original description: Putative UFD1, Description = AT2G21270 protein, PFAM = PF03152)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf00936_36549-43590' '(at3g24515 : 232.0) ubiquitin-conjugating enzyme 37 (UBC37); FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 11 (TAIR:AT3G08690.2); Has 10163 Blast hits to 10152 proteins in 398 species: Archae - 0; Bacteria - 2; Metazoa - 4605; Fungi - 2137; Plants - 1818; Viruses - 27; Other Eukaryotes - 1574 (source: NCBI BLink). & (gnl|cdd|35638 : 165.0) no description available & (gnl|cdd|84587 : 156.0) no description available & (p25866|ubc2_wheat : 88.2) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (reliability: 464.0) & (original description: Putative ube2t, Description = Ubiquitin-conjugating enzyme E2 T, PFAM = PF00179)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf00960_832259-838481' '(gnl|cdd|29216 : 184.0) no description available & (at1g22050 : 156.0) membrane-anchored ubiquitin-fold protein 6 precursor (MUB6); CONTAINS InterPro DOMAIN/s: Membrane-anchored ubiquitin-fold protein, HCG-1 (InterPro:IPR017000), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: membrane-anchored ubiquitin-fold protein 5 precursor (TAIR:AT1G77870.1); Has 161 Blast hits to 161 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q6z8k4|mub3_orysa : 152.0) Membrane-anchored ubiquitin-fold protein 3 precursor (Membrane-anchored ub-fold protein 3) (OsMUB3) - Oryza sativa (Rice) & (reliability: 312.0) & (original description: Putative MUB6, Description = Membrane-anchored ubiquitin-fold protein 6, PFAM = PF13881)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf01236_489211-491678' '(at3g62250 : 248.0) ubiquitin 5 (UBQ5); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: protein ubiquitination involved in ubiquitin-dependent protein catabolic process, translation; LOCATED IN: cytosolic small ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ribosomal protein S27a (InterPro:IPR002906), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 6 (TAIR:AT2G47110.2); Has 12703 Blast hits to 7391 proteins in 781 species: Archae - 108; Bacteria - 19; Metazoa - 5541; Fungi - 1408; Plants - 3106; Viruses - 188; Other Eukaryotes - 2333 (source: NCBI BLink). & (gnl|cdd|35228 : 224.0) no description available & (p69326|ubiq_wheat : 148.0) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|29205 : 145.0) no description available & (reliability: 496.0) & (original description: Putative r27a, Description = Ubiquitin-40S ribosomal protein S27a, PFAM = PF00240;PF01599)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf01278_142853-151168' '(at1g31340 : 237.0) Encodes a ubiquitin-related protein that is conjugated to target proteins by neddylation. It has been shown to be conjugated to the cullin AtCUL1. The RUB-conjugation pathway has been implicated in in auxin response.; related to ubiquitin 1 (RUB1); INVOLVED IN: protein modification process, response to auxin stimulus, protein neddylation, ethylene biosynthetic process, embryo development; LOCATED IN: plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 7 (TAIR:AT2G35635.1); Has 16064 Blast hits to 7349 proteins in 721 species: Archae - 0; Bacteria - 36; Metazoa - 7330; Fungi - 1879; Plants - 3570; Viruses - 331; Other Eukaryotes - 2918 (source: NCBI BLink). & (gnl|cdd|29205 : 138.0) no description available & (p69326|ubiq_wheat : 136.0) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|35228 : 135.0) no description available & (reliability: 474.0) & (original description: Putative RUB1, Description = Ubiquitin-NEDD8-like protein RUB1, PFAM = PF00240;PF00240)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf01283_40777-46799' '(at1g17280 : 332.0) ubiquitin-conjugating enzyme 34 (UBC34); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 33 (TAIR:AT5G50430.2); Has 7599 Blast hits to 7596 proteins in 375 species: Archae - 0; Bacteria - 0; Metazoa - 3285; Fungi - 1587; Plants - 1489; Viruses - 20; Other Eukaryotes - 1218 (source: NCBI BLink). & (gnl|cdd|36112 : 325.0) no description available & (gnl|cdd|29157 : 131.0) no description available & (reliability: 664.0) & (original description: Putative UBC34, Description = Ubiquitin-conjugating enzyme E2 34, PFAM = PF00179)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf01427_262477-279532' '(at2g12550 : 523.0) ubiquitin-associated (UBA)/TS-N domain-containing protein; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37772 : 355.0) no description available & (reliability: 1046.0) & (original description: Putative glysoja_011639, Description = NEDD8 ultimate buster 1, PFAM = )' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf01427_272912-276541' '(at2g12550 : 219.0) ubiquitin-associated (UBA)/TS-N domain-containing protein; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37772 : 177.0) no description available & (reliability: 438.0) & (original description: Putative glysoja_011639, Description = NEDD8 ultimate buster 1, PFAM = PF00627)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf01451_747791-756859' '(at1g65650 : 511.0) UCH2; CONTAINS InterPro DOMAIN/s: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (InterPro:IPR001578), Ubiquitinyl hydrolase, UCH37 type (InterPro:IPR017390); BEST Arabidopsis thaliana protein match is: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (TAIR:AT5G16310.1); Has 1283 Blast hits to 1275 proteins in 236 species: Archae - 0; Bacteria - 0; Metazoa - 633; Fungi - 351; Plants - 143; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (gnl|cdd|37989 : 447.0) no description available & (gnl|cdd|85235 : 224.0) no description available & (reliability: 1022.0) & (original description: Putative UCH2, Description = Ubiquitin carboxyl-terminal hydrolase 2, PFAM = PF01088)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf01556_507175-516929' '(at4g22290 : 448.0) Ubiquitin-specific protease family C19-related protein; BEST Arabidopsis thaliana protein match is: Ubiquitin-specific protease family C19-related protein (TAIR:AT1G78880.1); Has 147 Blast hits to 147 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 896.0) & (original description: Putative At1g16860, Description = Uncharacterized membrane protein At1g16860, PFAM = )' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf01718_173394-181618' '(at2g16920 : 1081.0) ubiquitin-conjugating enzyme 23 (UBC23); FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: phosphate 2 (TAIR:AT2G33770.1); Has 13499 Blast hits to 9775 proteins in 506 species: Archae - 15; Bacteria - 1590; Metazoa - 4947; Fungi - 2194; Plants - 1786; Viruses - 166; Other Eukaryotes - 2801 (source: NCBI BLink). & (gnl|cdd|36113 : 702.0) no description available & (gnl|cdd|29157 : 111.0) no description available & (reliability: 2162.0) & (original description: Putative UBC23, Description = Probable ubiquitin-conjugating enzyme E2 23, PFAM = PF00179)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf01779_248715-267433' '(at4g31160 : 1513.0) Encodes a DCAF/DWD protein capable of interacting with DDB1 and associating with CUL4, likely as part of a nuclear ubiquitin ligase complex. DCAF1 appears to be required for plant embryogenesis and to affect several other developmental processes including leaf, shoot, and flower development.; DDB1-CUL4 associated factor 1 (DCAF1); FUNCTIONS IN: nucleotide binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594); Has 5754 Blast hits to 3482 proteins in 410 species: Archae - 46; Bacteria - 1277; Metazoa - 1225; Fungi - 769; Plants - 278; Viruses - 87; Other Eukaryotes - 2072 (source: NCBI BLink). & (gnl|cdd|37043 : 588.0) no description available & (reliability: 3026.0) & (original description: Putative DCAF1, Description = DDB1- and CUL4-associated factor homolog 1, PFAM = )' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf01956_78496-84649' '(at2g47110 : 232.0) polyubiquitin gene; ubiquitin 6 (UBQ6); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: protein ubiquitination involved in ubiquitin-dependent protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: cytosolic small ribosomal subunit, intracellular; EXPRESSED IN: whole plant, male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ribosomal protein S27a (InterPro:IPR002906), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 5 (TAIR:AT3G62250.1). & (gnl|cdd|35228 : 209.0) no description available & (p69326|ubiq_wheat : 138.0) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|29205 : 135.0) no description available & (reliability: 464.0) & (original description: Putative r27a, Description = Ubiquitin-40S ribosomal protein S27a, PFAM = PF00240;PF01599)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf02011_465199-469762' '(at2g46500 : 640.0) Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. Phosphorylates PUFD1 and RPN10 in vitro.; phosphoinositide 4-kinase gamma 4 (PI4K GAMMA 4); CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase ;Ubiquitin family protein (TAIR:AT5G24240.1). & (gnl|cdd|37592 : 252.0) no description available & (gnl|cdd|84784 : 117.0) no description available & (reliability: 1280.0) & (original description: Putative PI4KG2, Description = Phosphatidylinositol 4-kinase gamma 2, PFAM = PF00454;PF00240)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf02041_279260-292582' '(at2g17200 : 416.0) DSK2; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquilin (InterPro:IPR015496), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin family protein (TAIR:AT2G17190.1); Has 15379 Blast hits to 7776 proteins in 854 species: Archae - 6; Bacteria - 3440; Metazoa - 5160; Fungi - 1735; Plants - 2506; Viruses - 174; Other Eukaryotes - 2358 (source: NCBI BLink). & (gnl|cdd|35234 : 301.0) no description available & (gnl|cdd|29211 : 97.2) no description available & (reliability: 832.0) & (original description: Putative DSK2B, Description = Ubiquitin domain-containing protein DSK2b, PFAM = PF00627;PF00240)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf02131_93813-96222' '(at3g62250 : 131.0) ubiquitin 5 (UBQ5); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: protein ubiquitination involved in ubiquitin-dependent protein catabolic process, translation; LOCATED IN: cytosolic small ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ribosomal protein S27a (InterPro:IPR002906), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 6 (TAIR:AT2G47110.2); Has 12703 Blast hits to 7391 proteins in 781 species: Archae - 108; Bacteria - 19; Metazoa - 5541; Fungi - 1408; Plants - 3106; Viruses - 188; Other Eukaryotes - 2333 (source: NCBI BLink). & (gnl|cdd|29205 : 122.0) no description available & (p69326|ubiq_wheat : 120.0) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|35228 : 120.0) no description available & (reliability: 262.0) & (original description: Putative ubb, Description = Polyubiquitin, PFAM = PF00240)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf02297_214095-223491' '(at3g15355 : 335.0) ubiquitin-conjugating enzyme 25 (UBC25); FUNCTIONS IN: small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein (TAIR:AT1G53025.1); Has 6168 Blast hits to 6144 proteins in 365 species: Archae - 0; Bacteria - 0; Metazoa - 2619; Fungi - 1243; Plants - 1332; Viruses - 17; Other Eukaryotes - 957 (source: NCBI BLink). & (gnl|cdd|36113 : 310.0) no description available & (gnl|cdd|29157 : 112.0) no description available & (reliability: 668.0) & (original description: Putative UBC39, Description = Putative ubiquitin-conjugating enzyme E2 39, PFAM = PF00179)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf02466_48713-96346' '(at5g02310 : 1627.0) Encodes PROTEOLYSIS6 (PRT6), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Another component of the N-end rule pathway is arginyl-tRNA:protein arginyltransferase (ATE). Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination.; proteolysis 6 (PRT6); CONTAINS InterPro DOMAIN/s: Zinc finger, N-recognin, metazoa (InterPro:IPR013993), Zinc finger, N-recognin (InterPro:IPR003126); Has 1893 Blast hits to 778 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 939; Fungi - 577; Plants - 100; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (gnl|cdd|36355 : 388.0) no description available & (gnl|cdd|47708 : 90.1) no description available & (reliability: 3254.0) & (original description: Putative UBR3, Description = E3 ubiquitin-protein ligase UBR2, PFAM = PF02207)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf02513_10773-17965' '(at4g36860 : 201.0) LIM domain-containing protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Ubiquitin interacting motif (InterPro:IPR003903), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: DA1 (TAIR:AT1G19270.1); Has 6004 Blast hits to 4271 proteins in 323 species: Archae - 7; Bacteria - 228; Metazoa - 4096; Fungi - 190; Plants - 320; Viruses - 67; Other Eukaryotes - 1096 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative , Description = , PFAM = PF12315)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf02602_55345-62498' '(at1g53025 : 356.0) Ubiquitin-conjugating enzyme family protein; FUNCTIONS IN: small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 25 (TAIR:AT3G15355.1). & (gnl|cdd|36113 : 321.0) no description available & (gnl|cdd|29157 : 121.0) no description available & (reliability: 712.0) & (original description: Putative UBC38, Description = Putative ubiquitin-conjugating enzyme E2 38, PFAM = PF00179)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf02824_228152-232071' '(at2g03890 : 872.0) Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains.; phosphoinositide 4-kinase gamma 7 (PI4K GAMMA 7); FUNCTIONS IN: inositol or phosphatidylinositol kinase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase family protein (TAIR:AT1G13640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37592 : 314.0) no description available & (gnl|cdd|84784 : 117.0) no description available & (reliability: 1654.0) & (original description: Putative PI4KG7, Description = Phosphatidylinositol 4-kinase gamma 7, PFAM = PF00454)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf02902_153809-164513' '(at1g43690 : 737.0) ubiquitin interaction motif-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin interacting motif (InterPro:IPR003903); Has 368 Blast hits to 347 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 246; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|38082 : 359.0) no description available & (reliability: 1474.0) & (original description: Putative At1g43690, Description = At1g43690/F2J6_4, PFAM = PF13898)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf02972_920339-926243' '(at3g52590 : 234.0) Ubiquitin extension protein; ubiquitin extension protein 1 (UBQ1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to water deprivation, protein ubiquitination, embryo development ending in seed dormancy; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L40e (InterPro:IPR001975), Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Ubiquitin supergroup;Ribosomal protein L40e (TAIR:AT2G36170.1); Has 12437 Blast hits to 7147 proteins in 724 species: Archae - 0; Bacteria - 19; Metazoa - 5493; Fungi - 1424; Plants - 3085; Viruses - 174; Other Eukaryotes - 2242 (source: NCBI BLink). & (gnl|cdd|35227 : 208.0) no description available & (gnl|cdd|29205 : 145.0) no description available & (p69326|ubiq_wheat : 144.0) Ubiquitin - Triticum aestivum (Wheat) & (reliability: 468.0) & (original description: Putative ubqB, Description = Ubiquitin-60S ribosomal protein L40, PFAM = PF00240;PF01020)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf02995_212940-215782' '(at4g05230 : 135.0) Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G05260.1); Has 4647 Blast hits to 1657 proteins in 390 species: Archae - 0; Bacteria - 2; Metazoa - 2183; Fungi - 551; Plants - 1389; Viruses - 66; Other Eukaryotes - 456 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative TCM_030159, Description = Ubiquitin, putative, PFAM = PF00240;PF00240;PF00240)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf03488_671970-681630' '(at1g04850 : 466.0) ubiquitin-associated (UBA)/TS-N domain-containing protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567), Zinc finger, C2H2-type (InterPro:IPR007087), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48690.1); Has 9425 Blast hits to 9403 proteins in 278 species: Archae - 0; Bacteria - 0; Metazoa - 2591; Fungi - 765; Plants - 4746; Viruses - 72; Other Eukaryotes - 1251 (source: NCBI BLink). & (gnl|cdd|37910 : 233.0) no description available & (gnl|cdd|87954 : 86.1) no description available & (reliability: 932.0) & (original description: Putative Sb04g020490, Description = Putative uncharacterized protein Sb04g020490, PFAM = PF09409;PF00627)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf03673_383813-402026' '(at2g17200 : 413.0) DSK2; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquilin (InterPro:IPR015496), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin family protein (TAIR:AT2G17190.1); Has 15379 Blast hits to 7776 proteins in 854 species: Archae - 6; Bacteria - 3440; Metazoa - 5160; Fungi - 1735; Plants - 2506; Viruses - 174; Other Eukaryotes - 2358 (source: NCBI BLink). & (gnl|cdd|35234 : 305.0) no description available & (gnl|cdd|29211 : 93.3) no description available & (reliability: 826.0) & (original description: Putative DSK2B, Description = Ubiquitin domain-containing protein DSK2b, PFAM = PF00240;PF00627)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf03886_211998-218307' '(at5g50870 : 303.0) ubiquitin-conjugating enzyme 27 (UBC27); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin conjugating enzyme 8 (TAIR:AT5G41700.4). & (gnl|cdd|35639 : 237.0) no description available & (gnl|cdd|29157 : 175.0) no description available & (p25866|ubc2_wheat : 97.4) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (reliability: 606.0) & (original description: Putative UBC27, Description = Ubiquitin-conjugating enzyme E2 27, PFAM = PF00627;PF00179)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf04099_268259-274514' '(at4g24690 : 387.0) ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Zinc finger, ZZ-type (InterPro:IPR000433); Has 643 Blast hits to 609 proteins in 134 species: Archae - 0; Bacteria - 9; Metazoa - 374; Fungi - 110; Plants - 97; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|30246 : 81.6) no description available & (reliability: 774.0) & (original description: Putative Os02g0593700, Description = Os02g0593700 protein, PFAM = PF16158;PF00564;PF00569)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf04187_243388-247307' '(at2g03890 : 874.0) Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains.; phosphoinositide 4-kinase gamma 7 (PI4K GAMMA 7); FUNCTIONS IN: inositol or phosphatidylinositol kinase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase family protein (TAIR:AT1G13640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37592 : 317.0) no description available & (gnl|cdd|84784 : 115.0) no description available & (reliability: 1650.0) & (original description: Putative PI4KG7, Description = Phosphatidylinositol 4-kinase gamma 7, PFAM = PF00454)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf04554_716265-736772' '(at4g31160 : 1487.0) Encodes a DCAF/DWD protein capable of interacting with DDB1 and associating with CUL4, likely as part of a nuclear ubiquitin ligase complex. DCAF1 appears to be required for plant embryogenesis and to affect several other developmental processes including leaf, shoot, and flower development.; DDB1-CUL4 associated factor 1 (DCAF1); FUNCTIONS IN: nucleotide binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594); Has 5754 Blast hits to 3482 proteins in 410 species: Archae - 46; Bacteria - 1277; Metazoa - 1225; Fungi - 769; Plants - 278; Viruses - 87; Other Eukaryotes - 2072 (source: NCBI BLink). & (gnl|cdd|37043 : 590.0) no description available & (reliability: 2974.0) & (original description: Putative DCAF1, Description = DDB1- and CUL4-associated factor homolog 1, PFAM = )' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf04742_338876-348212' '(at5g12120 : 286.0) Ubiquitin-associated/translation elongation factor EF1B protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940); BEST Arabidopsis thaliana protein match is: Ubiquitin-associated/translation elongation factor EF1B protein (TAIR:AT2G26920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 572.0) & (original description: Putative At2g26920, Description = Ubiquitin-associated/translation elongation factor EF1B protein, PFAM = )' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf04742_345283-349183' '(at2g26920 : 417.0) Ubiquitin-associated/translation elongation factor EF1B protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Ubiquitin-associated/translation elongation factor EF1B protein (TAIR:AT5G12120.1); Has 396 Blast hits to 387 proteins in 96 species: Archae - 0; Bacteria - 14; Metazoa - 132; Fungi - 65; Plants - 58; Viruses - 1; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 834.0) & (original description: Putative At2g26920, Description = At2g26920, PFAM = )' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf04989_126096-137889' '(at1g53025 : 355.0) Ubiquitin-conjugating enzyme family protein; FUNCTIONS IN: small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 25 (TAIR:AT3G15355.1). & (gnl|cdd|36113 : 320.0) no description available & (gnl|cdd|29157 : 115.0) no description available & (reliability: 710.0) & (original description: Putative UBC38, Description = Putative ubiquitin-conjugating enzyme E2 38, PFAM = PF00179)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf05246_78654-102342' '(at5g02310 : 1665.0) Encodes PROTEOLYSIS6 (PRT6), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Another component of the N-end rule pathway is arginyl-tRNA:protein arginyltransferase (ATE). Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination.; proteolysis 6 (PRT6); CONTAINS InterPro DOMAIN/s: Zinc finger, N-recognin, metazoa (InterPro:IPR013993), Zinc finger, N-recognin (InterPro:IPR003126); Has 1893 Blast hits to 778 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 939; Fungi - 577; Plants - 100; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (gnl|cdd|36355 : 406.0) no description available & (gnl|cdd|47708 : 87.4) no description available & (reliability: 3330.0) & (original description: Putative BnaA03g54900D, Description = BnaA03g54900D protein, PFAM = PF02207)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf05437_115446-121165' '(at4g24690 : 374.0) ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Zinc finger, ZZ-type (InterPro:IPR000433); Has 643 Blast hits to 609 proteins in 134 species: Archae - 0; Bacteria - 9; Metazoa - 374; Fungi - 110; Plants - 97; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 748.0) & (original description: Putative NBR1, Description = Phox/Bem1p, PFAM = PF00564;PF00569;PF16158)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf05688_313968-319322' '(at1g31340 : 183.0) Encodes a ubiquitin-related protein that is conjugated to target proteins by neddylation. It has been shown to be conjugated to the cullin AtCUL1. The RUB-conjugation pathway has been implicated in in auxin response.; related to ubiquitin 1 (RUB1); INVOLVED IN: protein modification process, response to auxin stimulus, protein neddylation, ethylene biosynthetic process, embryo development; LOCATED IN: plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 7 (TAIR:AT2G35635.1); Has 16064 Blast hits to 7349 proteins in 721 species: Archae - 0; Bacteria - 36; Metazoa - 7330; Fungi - 1879; Plants - 3570; Viruses - 331; Other Eukaryotes - 2918 (source: NCBI BLink). & (p69326|ubiq_wheat : 139.0) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|29205 : 138.0) no description available & (gnl|cdd|35227 : 134.0) no description available & (reliability: 366.0) & (original description: Putative ubb, Description = Polyubiquitin, PFAM = PF00240;PF00240)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf05886_105530-130428' '(at4g22290 : 177.0) Ubiquitin-specific protease family C19-related protein; BEST Arabidopsis thaliana protein match is: Ubiquitin-specific protease family C19-related protein (TAIR:AT1G78880.1); Has 147 Blast hits to 147 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative glysoja_015209, Description = Putative membrane protein, PFAM = )' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf06090_28935-33710' '(at1g71020 : 590.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G23030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q64ha9|spl11_orysa : 415.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|39425 : 99.0) no description available & (gnl|cdd|47808 : 94.2) no description available & (reliability: 1180.0) & (original description: Putative LOC100193248, Description = Putative ARM repeat-containing protein containing family protein, PFAM = PF04564;PF00514;PF00514)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf06412_583544-589154' '(gnl|cdd|36113 : 179.0) no description available & (at2g16920 : 157.0) ubiquitin-conjugating enzyme 23 (UBC23); FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: phosphate 2 (TAIR:AT2G33770.1); Has 13499 Blast hits to 9775 proteins in 506 species: Archae - 15; Bacteria - 1590; Metazoa - 4947; Fungi - 2194; Plants - 1786; Viruses - 166; Other Eukaryotes - 2801 (source: NCBI BLink). & (gnl|cdd|29157 : 88.0) no description available & (reliability: 314.0) & (original description: Putative Os01g0233900, Description = Os01g0233900 protein, PFAM = PF00179)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf06778_672672-685671' '(at2g24640 : 652.0) ubiquitin-specific protease 19 (UBP19); FUNCTIONS IN: cysteine-type endopeptidase activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 18 (TAIR:AT4G31670.1). & (gnl|cdd|37076 : 450.0) no description available & (gnl|cdd|73067 : 436.0) no description available & (reliability: 1304.0) & (original description: Putative UBP19, Description = Ubiquitin carboxyl-terminal hydrolase 19, PFAM = PF00443;PF01753)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf07044_339270-343997' '(at1g71020 : 605.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G23030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q64ha9|spl11_orysa : 425.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 94.5) no description available & (gnl|cdd|39425 : 84.7) no description available & (reliability: 1210.0) & (original description: Putative PUB10, Description = U-box domain-containing protein 10, PFAM = PF04564;PF00514;PF00514)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf07250_482416-489235' '(at4g38630 : 375.0) Regulatory particle non-ATPase subunit of the 26S proteasome with multiubiquitin-chain-binding capabilities; regulatory particle non-ATPase 10 (RPN10); FUNCTIONS IN: peptide receptor activity; INVOLVED IN: in 19 processes; LOCATED IN: cytosol, proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ssl1-like (InterPro:IPR007198), Ubiquitin interacting motif (InterPro:IPR003903), von Willebrand factor, type A (InterPro:IPR002035); Has 677 Blast hits to 665 proteins in 240 species: Archae - 0; Bacteria - 16; Metazoa - 271; Fungi - 148; Plants - 120; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|38095 : 306.0) no description available & (gnl|cdd|29225 : 282.0) no description available & (reliability: 750.0) & (original description: Putative RPN10, Description = 26S proteasome non-ATPase regulatory subunit 4 homolog, PFAM = PF13519;PF02809;PF02809;PF02809)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf07350_90351-94501' '(at2g26920 : 395.0) Ubiquitin-associated/translation elongation factor EF1B protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Ubiquitin-associated/translation elongation factor EF1B protein (TAIR:AT5G12120.1); Has 396 Blast hits to 387 proteins in 96 species: Archae - 0; Bacteria - 14; Metazoa - 132; Fungi - 65; Plants - 58; Viruses - 1; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 790.0) & (original description: Putative At2g26920, Description = At2g26920, PFAM = )' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf07463_109741-133534' '(at5g06600 : 1798.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37074 : 837.0) no description available & (gnl|cdd|34681 : 638.0) no description available & (reliability: 3582.0) & (original description: Putative UBP13, Description = Ubiquitin carboxyl-terminal hydrolase 13, PFAM = PF14533;PF12436;PF00443;PF00917)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf07668_80522-90776' '(at1g04850 : 231.0) ubiquitin-associated (UBA)/TS-N domain-containing protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567), Zinc finger, C2H2-type (InterPro:IPR007087), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48690.1); Has 9425 Blast hits to 9403 proteins in 278 species: Archae - 0; Bacteria - 0; Metazoa - 2591; Fungi - 765; Plants - 4746; Viruses - 72; Other Eukaryotes - 1251 (source: NCBI BLink). & (gnl|cdd|37910 : 155.0) no description available & (reliability: 462.0) & (original description: Putative PGSC0003DMG400026879, Description = Ubiquitin-associated (UBA)/TS-N domain protein, PFAM = PF09409;PF00627)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf08127_243746-247662' '(at2g03890 : 900.0) Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains.; phosphoinositide 4-kinase gamma 7 (PI4K GAMMA 7); FUNCTIONS IN: inositol or phosphatidylinositol kinase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase family protein (TAIR:AT1G13640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37592 : 313.0) no description available & (gnl|cdd|84784 : 116.0) no description available & (reliability: 1726.0) & (original description: Putative PI4KG7, Description = Phosphatidylinositol 4-kinase gamma 7, PFAM = PF00454)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf08478_424860-444646' '(at1g04850 : 201.0) ubiquitin-associated (UBA)/TS-N domain-containing protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567), Zinc finger, C2H2-type (InterPro:IPR007087), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48690.1); Has 9425 Blast hits to 9403 proteins in 278 species: Archae - 0; Bacteria - 0; Metazoa - 2591; Fungi - 765; Plants - 4746; Viruses - 72; Other Eukaryotes - 1251 (source: NCBI BLink). & (gnl|cdd|37910 : 102.0) no description available & (gnl|cdd|87954 : 83.1) no description available & (reliability: 402.0) & (original description: Putative PGSC0003DMG400026411, Description = Ubiquitin-associated/TS-N domain-containing protein, PFAM = PF09409)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf08566_388147-416376' '(at4g36860 : 195.0) LIM domain-containing protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Ubiquitin interacting motif (InterPro:IPR003903), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: DA1 (TAIR:AT1G19270.1); Has 6004 Blast hits to 4271 proteins in 323 species: Archae - 7; Bacteria - 228; Metazoa - 4096; Fungi - 190; Plants - 320; Viruses - 67; Other Eukaryotes - 1096 (source: NCBI BLink). & (gnl|cdd|36916 : 80.7) no description available & (reliability: 384.0) & (original description: Putative , Description = , PFAM = PF12315)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf08566_409040-411809' '(at1g19270 : 106.0) DA1 (DA1); CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Ubiquitin interacting motif (InterPro:IPR003903), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: LIM domain-containing protein (TAIR:AT4G36860.1); Has 3538 Blast hits to 2617 proteins in 167 species: Archae - 0; Bacteria - 18; Metazoa - 3009; Fungi - 63; Plants - 177; Viruses - 0; Other Eukaryotes - 271 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative , Description = , PFAM = PF12315)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf08690_257267-261925' '(at2g46500 : 741.0) Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. Phosphorylates PUFD1 and RPN10 in vitro.; phosphoinositide 4-kinase gamma 4 (PI4K GAMMA 4); CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase ;Ubiquitin family protein (TAIR:AT5G24240.1). & (gnl|cdd|37592 : 259.0) no description available & (gnl|cdd|84784 : 129.0) no description available & (reliability: 1482.0) & (original description: Putative PI4KG4, Description = Phosphatidylinositol 4-kinase gamma 4, PFAM = PF00240;PF00454)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf09010_190178-196133' '(at2g21270 : 403.0) ubiquitin fusion degradation 1 (UFD1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin fusion degradation protein UFD1 (InterPro:IPR004854); BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT4G38930.2); Has 705 Blast hits to 703 proteins in 222 species: Archae - 8; Bacteria - 2; Metazoa - 165; Fungi - 211; Plants - 127; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (gnl|cdd|37027 : 360.0) no description available & (gnl|cdd|66804 : 274.0) no description available & (reliability: 806.0) & (original description: Putative ufd1, Description = Ubiquitin fusion degradation protein 1 homolog, PFAM = PF03152)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf09610_130073-181884' '(at5g06600 : 1618.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37074 : 701.0) no description available & (gnl|cdd|34681 : 519.0) no description available & (reliability: 3194.0) & (original description: Putative USP7, Description = Ubiquitin carboxyl-terminal hydrolase 12, PFAM = PF14533;PF12436;PF12436;PF00917;PF00443)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf09620_704174-800860' '(at3g52590 : 185.0) Ubiquitin extension protein; ubiquitin extension protein 1 (UBQ1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to water deprivation, protein ubiquitination, embryo development ending in seed dormancy; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L40e (InterPro:IPR001975), Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Ubiquitin supergroup;Ribosomal protein L40e (TAIR:AT2G36170.1); Has 12437 Blast hits to 7147 proteins in 724 species: Archae - 0; Bacteria - 19; Metazoa - 5493; Fungi - 1424; Plants - 3085; Viruses - 174; Other Eukaryotes - 2242 (source: NCBI BLink). & (gnl|cdd|35227 : 167.0) no description available & (gnl|cdd|29205 : 143.0) no description available & (p69326|ubiq_wheat : 140.0) Ubiquitin - Triticum aestivum (Wheat) & (reliability: 370.0) & (original description: Putative ubqB, Description = Ubiquitin-60S ribosomal protein L40, PFAM = PF00240;PF01020)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf09854_170743-296369' '(at5g06600 : 306.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37074 : 159.0) no description available & (gnl|cdd|58100 : 123.0) no description available & (reliability: 588.0) & (original description: Putative USP7, Description = Ubiquitin carboxyl-terminal hydrolase 12, PFAM = PF12436;PF00917)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf10360_45591-61103' '(at4g10570 : 1096.0) encodes a ubiquitin-specific protease family member, UBP9.; ubiquitin-specific protease 9 (UBP9); FUNCTIONS IN: cysteine-type endopeptidase activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin-specific peptidase, DUSP domain (InterPro:IPR006615), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 10 (TAIR:AT4G10590.1); Has 11569 Blast hits to 7616 proteins in 265 species: Archae - 0; Bacteria - 6; Metazoa - 6024; Fungi - 1995; Plants - 1380; Viruses - 8; Other Eukaryotes - 2156 (source: NCBI BLink). & (gnl|cdd|37081 : 663.0) no description available & (gnl|cdd|35119 : 454.0) no description available & (reliability: 2192.0) & (original description: Putative UBP10, Description = Ubiquitin carboxyl-terminal hydrolase 10, PFAM = PF00443;PF06337)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf10920_178894-194331' '(at5g06600 : 1078.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37074 : 553.0) no description available & (gnl|cdd|34681 : 530.0) no description available & (reliability: 2110.0) & (original description: Putative usp7, Description = Ubiquitin carboxyl-terminal hydrolase 12, PFAM = PF00443;PF00917)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf11177_79719-84382' '(at5g24240 : 760.0) Phosphatidylinositol 3- and 4-kinase ;Ubiquitin family protein; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, phosphotransferase activity, alcohol group as acceptor; LOCATED IN: peroxisome; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: phosphoinositide 4-kinase gamma 4 (TAIR:AT2G46500.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37592 : 271.0) no description available & (gnl|cdd|84784 : 138.0) no description available & (reliability: 1520.0) & (original description: Putative PI4KG3, Description = Phosphatidylinositol 4-kinase gamma 3, PFAM = PF00240;PF00240;PF00454)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf11709_91664-99043' '(at4g22290 : 471.0) Ubiquitin-specific protease family C19-related protein; BEST Arabidopsis thaliana protein match is: Ubiquitin-specific protease family C19-related protein (TAIR:AT1G78880.1); Has 147 Blast hits to 147 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 942.0) & (original description: Putative At4g22290, Description = At4g22290, PFAM = )' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf11953_16237-36449' '(at5g06600 : 1733.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37074 : 821.0) no description available & (gnl|cdd|34681 : 624.0) no description available & (reliability: 3422.0) & (original description: Putative UBP12, Description = Ubiquitin specific protease 12, PFAM = PF12436;PF00443;PF14533;PF00917)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf13776_50939-56922' '(at1g71020 : 632.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G23030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q64ha9|spl11_orysa : 421.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 95.7) no description available & (gnl|cdd|39425 : 88.2) no description available & (reliability: 1264.0) & (original description: Putative LOC100193248, Description = Putative ARM repeat-containing protein containing family protein, PFAM = PF04564;PF00514;PF00514)' T '29.5.11' 'protein.degradation.ubiquitin' 'niben101scf18061_31123-42060' '(at1g19270 : 655.0) DA1 (DA1); CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Ubiquitin interacting motif (InterPro:IPR003903), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: LIM domain-containing protein (TAIR:AT4G36860.1); Has 3538 Blast hits to 2617 proteins in 167 species: Archae - 0; Bacteria - 18; Metazoa - 3009; Fungi - 63; Plants - 177; Viruses - 0; Other Eukaryotes - 271 (source: NCBI BLink). & (gnl|cdd|36916 : 239.0) no description available & (reliability: 1310.0) & (original description: Putative DA1, Description = Protein DA1, PFAM = PF00412;PF12315)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'nbv0.3scaffold782_1833-10012' '(at2g30100 : 522.0) pentatricopeptide (PPR) repeat-containing protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT5G04810.1); Has 68862 Blast hits to 30982 proteins in 1167 species: Archae - 27; Bacteria - 7834; Metazoa - 26033; Fungi - 2446; Plants - 28670; Viruses - 2; Other Eukaryotes - 3850 (source: NCBI BLink). & (reliability: 1044.0) & (original description: Putative At2g30100, Description = Pentatricopeptide repeat-containing protein At2g30100, chloroplastic, PFAM = )' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'nbv0.3scaffold4186_7562-16910' '(at2g17200 : 424.0) DSK2; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquilin (InterPro:IPR015496), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin family protein (TAIR:AT2G17190.1); Has 15379 Blast hits to 7776 proteins in 854 species: Archae - 6; Bacteria - 3440; Metazoa - 5160; Fungi - 1735; Plants - 2506; Viruses - 174; Other Eukaryotes - 2358 (source: NCBI BLink). & (gnl|cdd|35234 : 311.0) no description available & (gnl|cdd|29211 : 97.2) no description available & (reliability: 800.0) & (original description: Putative DSK2A, Description = Ubiquitin domain-containing protein DSK2a, PFAM = PF00240;PF00627)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'nbv0.3scaffold8731_743-47805' '(at4g05320 : 763.0) One of five polyubiquitin genes in A. thaliana. These genes encode the highly conserved 76-amino acid protein ubiquitin that is covalently attached to substrate proteins targeting most for degradation. Polyubiquitin genes are characterized by the presence of tandem repeats of the 228 bp that encode a ubiquitin monomer. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid.; polyubiquitin 10 (UBQ10); CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 4 (TAIR:AT5G20620.1); Has 32669 Blast hits to 7219 proteins in 726 species: Archae - 0; Bacteria - 99; Metazoa - 15287; Fungi - 3767; Plants - 6623; Viruses - 815; Other Eukaryotes - 6078 (source: NCBI BLink). & (gnl|cdd|29205 : 138.0) no description available & (p69326|ubiq_wheat : 136.0) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|35228 : 135.0) no description available & (reliability: 1526.0) & (original description: Putative ubb, Description = Polyubiquitin, PFAM = PF00240;PF00240;PF00240;PF00240;PF00240;PF00240;PF00240)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'nbv0.3scaffold8922_2981-7932' '(at5g57860 : 130.0) Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39695 : 91.3) no description available & (reliability: 260.0) & (original description: Putative ZOSMA_14G01640, Description = Transcription elongation factor B polypeptide 2, PFAM = PF00240)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'nbv0.3scaffold18300_27175-35648' '(p55857|smt3_orysa : 154.0) Ubiquitin-like protein SMT3 - Oryza sativa (Rice) & (at5g55160 : 151.0) Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays.; small ubiquitin-like modifier 2 (SUMO2); CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: small ubiquitin-like modifier 1 (TAIR:AT4G26840.1); Has 1114 Blast hits to 1111 proteins in 233 species: Archae - 0; Bacteria - 0; Metazoa - 633; Fungi - 141; Plants - 223; Viruses - 1; Other Eukaryotes - 116 (source: NCBI BLink). & (gnl|cdd|36980 : 126.0) no description available & (gnl|cdd|29166 : 126.0) no description available & (reliability: 302.0) & (original description: Putative SUMO1, Description = Small ubiquitin-related modifier, PFAM = PF11976)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'nbv0.3scaffold28913_1-8638' '(at2g17200 : 430.0) DSK2; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquilin (InterPro:IPR015496), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin family protein (TAIR:AT2G17190.1); Has 15379 Blast hits to 7776 proteins in 854 species: Archae - 6; Bacteria - 3440; Metazoa - 5160; Fungi - 1735; Plants - 2506; Viruses - 174; Other Eukaryotes - 2358 (source: NCBI BLink). & (gnl|cdd|35234 : 304.0) no description available & (gnl|cdd|29211 : 98.4) no description available & (reliability: 800.0) & (original description: Putative UBQ1, Description = Ubiquitin 1, PFAM = PF00240;PF00627)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'nbv0.3scaffold40768_5237-12891' '(at4g06599 : 326.0) ubiquitin family protein; FUNCTIONS IN: phosphoprotein phosphatase activity; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), HAD-superfamily hydrolase, subfamily IIID (InterPro:IPR011943), NLI interacting factor (InterPro:IPR004274); Has 390 Blast hits to 384 proteins in 126 species: Archae - 0; Bacteria - 8; Metazoa - 131; Fungi - 51; Plants - 106; Viruses - 7; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 652.0) & (original description: Putative UBQ2, Description = Ubiquitin-like domain-containing CTD phosphatase 1, PFAM = PF03031)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'nbv0.5scaffold78_855474-863790' '(at5g14360 : 144.0) Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT5G40630.1); Has 222 Blast hits to 222 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 6; Plants - 210; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|29214 : 100.0) no description available & (reliability: 288.0) & (original description: Putative PGSC0003DMG400011032, Description = BAG family molecular chaperone regulator 4, PFAM = PF00240)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'nbv0.5scaffold658_409770-418894' '(at1g31340 : 265.0) Encodes a ubiquitin-related protein that is conjugated to target proteins by neddylation. It has been shown to be conjugated to the cullin AtCUL1. The RUB-conjugation pathway has been implicated in in auxin response.; related to ubiquitin 1 (RUB1); INVOLVED IN: protein modification process, response to auxin stimulus, protein neddylation, ethylene biosynthetic process, embryo development; LOCATED IN: plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 7 (TAIR:AT2G35635.1); Has 16064 Blast hits to 7349 proteins in 721 species: Archae - 0; Bacteria - 36; Metazoa - 7330; Fungi - 1879; Plants - 3570; Viruses - 331; Other Eukaryotes - 2918 (source: NCBI BLink). & (gnl|cdd|29205 : 138.0) no description available & (p69326|ubiq_wheat : 135.0) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|35228 : 135.0) no description available & (reliability: 522.0) & (original description: Putative RUB1, Description = Ubiquitin-NEDD8-like protein RUB1, PFAM = PF00240;PF00240)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'nbv0.5scaffold2423_2341-6480' '(at4g05320 : 786.0) One of five polyubiquitin genes in A. thaliana. These genes encode the highly conserved 76-amino acid protein ubiquitin that is covalently attached to substrate proteins targeting most for degradation. Polyubiquitin genes are characterized by the presence of tandem repeats of the 228 bp that encode a ubiquitin monomer. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid.; polyubiquitin 10 (UBQ10); CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 4 (TAIR:AT5G20620.1); Has 32669 Blast hits to 7219 proteins in 726 species: Archae - 0; Bacteria - 99; Metazoa - 15287; Fungi - 3767; Plants - 6623; Viruses - 815; Other Eukaryotes - 6078 (source: NCBI BLink). & (gnl|cdd|29205 : 137.0) no description available & (gnl|cdd|35228 : 135.0) no description available & (p69326|ubiq_wheat : 134.0) Ubiquitin - Triticum aestivum (Wheat) & (reliability: 1572.0) & (original description: Putative ubb, Description = Polyubiquitin, PFAM = PF00240;PF00240;PF00240;PF00240;PF00240;PF00240;PF00240)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'nbv0.5scaffold4068_85489-89774' '(p55857|smt3_orysa : 89.0) Ubiquitin-like protein SMT3 - Oryza sativa (Rice) & (at4g26840 : 87.4) Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets.; small ubiquitin-like modifier 1 (SUMO1); CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: small ubiquitin-like modifier 2 (TAIR:AT5G55160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative smt3, Description = SUMO, PFAM = PF11976)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben044scf00006116ctg000_1-8548' '(at2g17200 : 374.0) DSK2; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquilin (InterPro:IPR015496), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin family protein (TAIR:AT2G17190.1); Has 15379 Blast hits to 7776 proteins in 854 species: Archae - 6; Bacteria - 3440; Metazoa - 5160; Fungi - 1735; Plants - 2506; Viruses - 174; Other Eukaryotes - 2358 (source: NCBI BLink). & (gnl|cdd|35234 : 265.0) no description available & (gnl|cdd|29211 : 98.4) no description available & (reliability: 700.0) & (original description: Putative UBQ1, Description = Heat shock chaperonin-binding, PFAM = PF00240)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben044scf00022976ctg002_3032-11887' '(at3g13235 : 578.0) ubiquitin family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Peptidase aspartic (InterPro:IPR021109), Ubiquitin subgroup (InterPro:IPR019956), Peptidase aspartic, eukaryotic predicted (InterPro:IPR019103), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Peptidase A2A, retrovirus, catalytic (InterPro:IPR001995), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060). & (gnl|cdd|35236 : 256.0) no description available & (gnl|cdd|88212 : 204.0) no description available & (reliability: 1156.0) & (original description: Putative ddi1, Description = DNA damage-inducible protein 1, PFAM = PF00240;PF09668;PF00627)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben044scf00028510ctg007_319-11807' '(at3g02540 : 417.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23C (RAD23C); FUNCTIONS IN: ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT5G38470.1). & (gnl|cdd|35235 : 359.0) no description available & (q40742|rad23_orysa : 345.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (gnl|cdd|29207 : 114.0) no description available & (reliability: 834.0) & (original description: Putative RAD23C, Description = Ubiquitin receptor RAD23c, PFAM = PF00627;PF00627;PF00240;PF09280)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben044scf00052219ctg009_1-3656' '(at1g31340 : 133.0) Encodes a ubiquitin-related protein that is conjugated to target proteins by neddylation. It has been shown to be conjugated to the cullin AtCUL1. The RUB-conjugation pathway has been implicated in in auxin response.; related to ubiquitin 1 (RUB1); INVOLVED IN: protein modification process, response to auxin stimulus, protein neddylation, ethylene biosynthetic process, embryo development; LOCATED IN: plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 7 (TAIR:AT2G35635.1); Has 16064 Blast hits to 7349 proteins in 721 species: Archae - 0; Bacteria - 36; Metazoa - 7330; Fungi - 1879; Plants - 3570; Viruses - 331; Other Eukaryotes - 2918 (source: NCBI BLink). & (p69326|ubiq_wheat : 89.4) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|29205 : 88.5) no description available & (gnl|cdd|35228 : 87.0) no description available & (reliability: 264.0) & (original description: Putative ubb, Description = Polyubiquitin, PFAM = PF00240;PF00240)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben044scf00054401ctg000_468-3962' '(at4g05320 : 703.0) One of five polyubiquitin genes in A. thaliana. These genes encode the highly conserved 76-amino acid protein ubiquitin that is covalently attached to substrate proteins targeting most for degradation. Polyubiquitin genes are characterized by the presence of tandem repeats of the 228 bp that encode a ubiquitin monomer. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid.; polyubiquitin 10 (UBQ10); CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 4 (TAIR:AT5G20620.1); Has 32669 Blast hits to 7219 proteins in 726 species: Archae - 0; Bacteria - 99; Metazoa - 15287; Fungi - 3767; Plants - 6623; Viruses - 815; Other Eukaryotes - 6078 (source: NCBI BLink). & (gnl|cdd|29205 : 136.0) no description available & (gnl|cdd|35228 : 135.0) no description available & (p69326|ubiq_wheat : 134.0) Ubiquitin - Triticum aestivum (Wheat) & (reliability: 1406.0) & (original description: Putative UBQ10, Description = Polyubiquitin 10, PFAM = PF00240;PF00240;PF00240;PF00240;PF00240;PF00240;PF00240)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf00046_631895-635049' '(at5g14360 : 145.0) Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT5G40630.1); Has 222 Blast hits to 222 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 6; Plants - 210; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|29214 : 100.0) no description available & (reliability: 290.0) & (original description: Putative PGSC0003DMG400011032, Description = BAG family molecular chaperone regulator 4, PFAM = PF00240)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf00174_149311-152453' '(at4g05320 : 658.0) One of five polyubiquitin genes in A. thaliana. These genes encode the highly conserved 76-amino acid protein ubiquitin that is covalently attached to substrate proteins targeting most for degradation. Polyubiquitin genes are characterized by the presence of tandem repeats of the 228 bp that encode a ubiquitin monomer. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid.; polyubiquitin 10 (UBQ10); CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 4 (TAIR:AT5G20620.1); Has 32669 Blast hits to 7219 proteins in 726 species: Archae - 0; Bacteria - 99; Metazoa - 15287; Fungi - 3767; Plants - 6623; Viruses - 815; Other Eukaryotes - 6078 (source: NCBI BLink). & (gnl|cdd|29205 : 137.0) no description available & (gnl|cdd|35228 : 135.0) no description available & (p69326|ubiq_wheat : 134.0) Ubiquitin - Triticum aestivum (Wheat) & (reliability: 1316.0) & (original description: Putative PU1, Description = Polyubiquitin, PFAM = PF00240;PF00240;PF00240;PF00240;PF00240)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf00288_1530172-1535562' '(at2g30100 : 323.0) pentatricopeptide (PPR) repeat-containing protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT5G04810.1); Has 68862 Blast hits to 30982 proteins in 1167 species: Archae - 27; Bacteria - 7834; Metazoa - 26033; Fungi - 2446; Plants - 28670; Viruses - 2; Other Eukaryotes - 3850 (source: NCBI BLink). & (reliability: 646.0) & (original description: Putative At2g30100, Description = Pentatricopeptide repeat-containing protein At2g30100, chloroplastic, PFAM = )' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf00406_363085-370499' '(at5g57860 : 132.0) Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39695 : 93.6) no description available & (reliability: 264.0) & (original description: Putative ZOSMA_14G01640, Description = Transcription elongation factor B polypeptide 2, PFAM = PF00240)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf00472_218827-230822' '(at4g06599 : 520.0) ubiquitin family protein; FUNCTIONS IN: phosphoprotein phosphatase activity; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), HAD-superfamily hydrolase, subfamily IIID (InterPro:IPR011943), NLI interacting factor (InterPro:IPR004274); Has 390 Blast hits to 384 proteins in 126 species: Archae - 0; Bacteria - 8; Metazoa - 131; Fungi - 51; Plants - 106; Viruses - 7; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|36818 : 98.5) no description available & (gnl|cdd|29215 : 95.4) no description available & (reliability: 1040.0) & (original description: Putative At4g06599, Description = Ubiquitin-like domain-containing CTD phosphatase, PFAM = PF00240;PF03031)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf00585_359978-369326' '(at2g17200 : 398.0) DSK2; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquilin (InterPro:IPR015496), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin family protein (TAIR:AT2G17190.1); Has 15379 Blast hits to 7776 proteins in 854 species: Archae - 6; Bacteria - 3440; Metazoa - 5160; Fungi - 1735; Plants - 2506; Viruses - 174; Other Eukaryotes - 2358 (source: NCBI BLink). & (gnl|cdd|35234 : 293.0) no description available & (gnl|cdd|29211 : 96.8) no description available & (reliability: 746.0) & (original description: Putative UBQ1, Description = Heat shock chaperonin-binding, PFAM = PF00240;PF00627)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf00892_2041-34222' '(at4g22285 : 723.0) Ubiquitin C-terminal hydrolases superfamily protein; FUNCTIONS IN: ubiquitin thiolesterase activity, zinc ion binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, UBP-type (InterPro:IPR001607), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: Ubiquitin C-terminal hydrolases superfamily protein (TAIR:AT4G22350.2); Has 3604 Blast hits to 3114 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 2060; Fungi - 575; Plants - 445; Viruses - 0; Other Eukaryotes - 524 (source: NCBI BLink). & (gnl|cdd|73075 : 640.0) no description available & (gnl|cdd|37237 : 579.0) no description available & (reliability: 1444.0) & (original description: Putative USP39, Description = U4/U6.U5 tri-snRNP-associated protein 2, PFAM = PF00443;PF02148)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf00894_162375-174064' '(at3g02540 : 427.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23C (RAD23C); FUNCTIONS IN: ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT5G38470.1). & (q40742|rad23_orysa : 360.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (gnl|cdd|35235 : 355.0) no description available & (gnl|cdd|29207 : 114.0) no description available & (reliability: 854.0) & (original description: Putative HR23, Description = Putative DNA repair protein RAD23-1, PFAM = PF00627;PF00627;PF09280;PF00240)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf01018_912188-917228' '(at5g55160 : 145.0) Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays.; small ubiquitin-like modifier 2 (SUMO2); CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: small ubiquitin-like modifier 1 (TAIR:AT4G26840.1); Has 1114 Blast hits to 1111 proteins in 233 species: Archae - 0; Bacteria - 0; Metazoa - 633; Fungi - 141; Plants - 223; Viruses - 1; Other Eukaryotes - 116 (source: NCBI BLink). & (p55857|smt3_orysa : 142.0) Ubiquitin-like protein SMT3 - Oryza sativa (Rice) & (gnl|cdd|36980 : 130.0) no description available & (gnl|cdd|29166 : 130.0) no description available & (reliability: 290.0) & (original description: Putative p125, Description = SUMO, PFAM = PF11976)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf01055_293202-301133' '(at3g26980 : 156.0) membrane-anchored ubiquitin-fold protein 4 precursor (MUB4); CONTAINS InterPro DOMAIN/s: Membrane-anchored ubiquitin-fold protein, HCG-1 (InterPro:IPR017000), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Ubiquitin family protein (TAIR:AT4G24990.1); Has 168 Blast hits to 168 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 11; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|29216 : 152.0) no description available & (q7xru4|mub4_orysa : 129.0) Membrane-anchored ubiquitin-fold protein 4 precursor (Membrane-anchored ub-fold protein 4) (OsMUB4) - Oryza sativa (Rice) & (reliability: 312.0) & (original description: Putative BnaA02g28440D, Description = BnaA02g28440D protein, PFAM = PF13881)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf01278_142853-151168' '(at1g31340 : 237.0) Encodes a ubiquitin-related protein that is conjugated to target proteins by neddylation. It has been shown to be conjugated to the cullin AtCUL1. The RUB-conjugation pathway has been implicated in in auxin response.; related to ubiquitin 1 (RUB1); INVOLVED IN: protein modification process, response to auxin stimulus, protein neddylation, ethylene biosynthetic process, embryo development; LOCATED IN: plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 7 (TAIR:AT2G35635.1); Has 16064 Blast hits to 7349 proteins in 721 species: Archae - 0; Bacteria - 36; Metazoa - 7330; Fungi - 1879; Plants - 3570; Viruses - 331; Other Eukaryotes - 2918 (source: NCBI BLink). & (gnl|cdd|29205 : 138.0) no description available & (p69326|ubiq_wheat : 136.0) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|35228 : 135.0) no description available & (reliability: 468.0) & (original description: Putative RUB1, Description = Ubiquitin-NEDD8-like protein RUB1, PFAM = PF00240;PF00240)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf01739_756236-763476' '(at4g22285 : 726.0) Ubiquitin C-terminal hydrolases superfamily protein; FUNCTIONS IN: ubiquitin thiolesterase activity, zinc ion binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, UBP-type (InterPro:IPR001607), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: Ubiquitin C-terminal hydrolases superfamily protein (TAIR:AT4G22350.2); Has 3604 Blast hits to 3114 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 2060; Fungi - 575; Plants - 445; Viruses - 0; Other Eukaryotes - 524 (source: NCBI BLink). & (gnl|cdd|73075 : 646.0) no description available & (gnl|cdd|37237 : 580.0) no description available & (reliability: 1442.0) & (original description: Putative ubp10, Description = Putative mRNA-splicing protein ubp10, PFAM = PF02148;PF00443)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf01943_407454-412530' '(p55857|smt3_orysa : 153.0) Ubiquitin-like protein SMT3 - Oryza sativa (Rice) & (at5g55160 : 151.0) Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays.; small ubiquitin-like modifier 2 (SUMO2); CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: small ubiquitin-like modifier 1 (TAIR:AT4G26840.1); Has 1114 Blast hits to 1111 proteins in 233 species: Archae - 0; Bacteria - 0; Metazoa - 633; Fungi - 141; Plants - 223; Viruses - 1; Other Eukaryotes - 116 (source: NCBI BLink). & (gnl|cdd|36980 : 128.0) no description available & (gnl|cdd|29166 : 127.0) no description available & (reliability: 302.0) & (original description: Putative SUMO1, Description = Small ubiquitin-related modifier 1, PFAM = PF11976)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf01970_691629-699493' '(at4g06599 : 424.0) ubiquitin family protein; FUNCTIONS IN: phosphoprotein phosphatase activity; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), HAD-superfamily hydrolase, subfamily IIID (InterPro:IPR011943), NLI interacting factor (InterPro:IPR004274); Has 390 Blast hits to 384 proteins in 126 species: Archae - 0; Bacteria - 8; Metazoa - 131; Fungi - 51; Plants - 106; Viruses - 7; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|36818 : 97.0) no description available & (reliability: 848.0) & (original description: Putative UBQ2, Description = Ubiquitin 2, PFAM = PF03031)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf02041_279260-292582' '(at2g17200 : 416.0) DSK2; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquilin (InterPro:IPR015496), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin family protein (TAIR:AT2G17190.1); Has 15379 Blast hits to 7776 proteins in 854 species: Archae - 6; Bacteria - 3440; Metazoa - 5160; Fungi - 1735; Plants - 2506; Viruses - 174; Other Eukaryotes - 2358 (source: NCBI BLink). & (gnl|cdd|35234 : 301.0) no description available & (gnl|cdd|29211 : 97.2) no description available & (reliability: 782.0) & (original description: Putative DSK2B, Description = Ubiquitin domain-containing protein DSK2b, PFAM = PF00627;PF00240)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf02131_93813-96222' '(at3g62250 : 131.0) ubiquitin 5 (UBQ5); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: protein ubiquitination involved in ubiquitin-dependent protein catabolic process, translation; LOCATED IN: cytosolic small ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ribosomal protein S27a (InterPro:IPR002906), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 6 (TAIR:AT2G47110.2); Has 12703 Blast hits to 7391 proteins in 781 species: Archae - 108; Bacteria - 19; Metazoa - 5541; Fungi - 1408; Plants - 3106; Viruses - 188; Other Eukaryotes - 2333 (source: NCBI BLink). & (gnl|cdd|29205 : 122.0) no description available & (p69326|ubiq_wheat : 120.0) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|35228 : 120.0) no description available & (reliability: 254.0) & (original description: Putative ubb, Description = Polyubiquitin, PFAM = PF00240)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf02665_1020657-1026534' '(at1g68185 : 159.0) Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin supergroup (InterPro:IPR019955); Has 482 Blast hits to 482 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 186; Fungi - 88; Plants - 146; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative At1g68185, Description = At1g68185, PFAM = PF11976)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf02957_21428-30111' '(at2g30100 : 521.0) pentatricopeptide (PPR) repeat-containing protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT5G04810.1); Has 68862 Blast hits to 30982 proteins in 1167 species: Archae - 27; Bacteria - 7834; Metazoa - 26033; Fungi - 2446; Plants - 28670; Viruses - 2; Other Eukaryotes - 3850 (source: NCBI BLink). & (reliability: 1042.0) & (original description: Putative At2g30100, Description = Pentatricopeptide repeat-containing protein At2g30100, chloroplastic, PFAM = )' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf03170_148105-153253' '(at5g55160 : 143.0) Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays.; small ubiquitin-like modifier 2 (SUMO2); CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: small ubiquitin-like modifier 1 (TAIR:AT4G26840.1); Has 1114 Blast hits to 1111 proteins in 233 species: Archae - 0; Bacteria - 0; Metazoa - 633; Fungi - 141; Plants - 223; Viruses - 1; Other Eukaryotes - 116 (source: NCBI BLink). & (p55857|smt3_orysa : 141.0) Ubiquitin-like protein SMT3 - Oryza sativa (Rice) & (gnl|cdd|36980 : 130.0) no description available & (gnl|cdd|29166 : 129.0) no description available & (reliability: 286.0) & (original description: Putative smt3, Description = Small ubiquitin-related modifier, PFAM = PF11976)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf03206_399795-405406' '(at3g09790 : 794.0) encodes a ubiquitin-like protein that contains tandem repeats of the ubiquitin coding region, but at least one repeat per gene encodes a protein with amino acid substitutions.; ubiquitin 8 (UBQ8); INVOLVED IN: protein modification process, ubiquitin-dependent protein catabolic process; LOCATED IN: cell wall, intracellular, vacuole; EXPRESSED IN: guard cell, juvenile leaf, trichome; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: polyubiquitin 10 (TAIR:AT4G05320.4); Has 39057 Blast hits to 7018 proteins in 718 species: Archae - 0; Bacteria - 147; Metazoa - 16312; Fungi - 4980; Plants - 8397; Viruses - 1303; Other Eukaryotes - 7918 (source: NCBI BLink). & (gnl|cdd|29205 : 137.0) no description available & (gnl|cdd|35228 : 135.0) no description available & (p69326|ubiq_wheat : 134.0) Ubiquitin - Triticum aestivum (Wheat) & (reliability: 1588.0) & (original description: Putative ubb, Description = Polyubiquitin, PFAM = PF00240;PF00240;PF00240;PF00240;PF00240;PF00240;PF00240;PF00240)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf03253_1-1856' '(at3g45180 : 127.0) Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin-like protein 5 (TAIR:AT5G42300.1); Has 399 Blast hits to 399 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 169; Fungi - 99; Plants - 81; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|29193 : 125.0) no description available & (gnl|cdd|38703 : 118.0) no description available & (reliability: 254.0) & (original description: Putative UBL5, Description = Ubiquitin-like protein 5, PFAM = PF00240)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf03444_190946-193971' '(at5g14360 : 155.0) Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT5G40630.1); Has 222 Blast hits to 222 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 6; Plants - 210; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|29214 : 102.0) no description available & (reliability: 310.0) & (original description: Putative PGSC0003DMG400011032, Description = BAG family molecular chaperone regulator 4, PFAM = PF00240)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf03673_383813-402026' '(at2g17200 : 413.0) DSK2; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquilin (InterPro:IPR015496), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin family protein (TAIR:AT2G17190.1); Has 15379 Blast hits to 7776 proteins in 854 species: Archae - 6; Bacteria - 3440; Metazoa - 5160; Fungi - 1735; Plants - 2506; Viruses - 174; Other Eukaryotes - 2358 (source: NCBI BLink). & (gnl|cdd|35234 : 305.0) no description available & (gnl|cdd|29211 : 93.3) no description available & (reliability: 788.0) & (original description: Putative DSK2B, Description = Ubiquitin domain-containing protein DSK2b, PFAM = PF00240;PF00627)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf03952_351592-357151' '(at4g01000 : 154.0) Ubiquitin-like superfamily protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626); BEST Arabidopsis thaliana protein match is: ubiquitin family protein (TAIR:AT3G06455.1); Has 9247 Blast hits to 4627 proteins in 669 species: Archae - 0; Bacteria - 50; Metazoa - 4022; Fungi - 1172; Plants - 2220; Viruses - 170; Other Eukaryotes - 1613 (source: NCBI BLink). & (gnl|cdd|38038 : 132.0) no description available & (reliability: 308.0) & (original description: Putative sde2, Description = Splicing factor 3A subunit 3, PFAM = PF13297;PF13019)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf04847_408308-418392' '(at3g13235 : 566.0) ubiquitin family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Peptidase aspartic (InterPro:IPR021109), Ubiquitin subgroup (InterPro:IPR019956), Peptidase aspartic, eukaryotic predicted (InterPro:IPR019103), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Peptidase A2A, retrovirus, catalytic (InterPro:IPR001995), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060). & (gnl|cdd|35236 : 258.0) no description available & (gnl|cdd|88212 : 203.0) no description available & (reliability: 1132.0) & (original description: Putative ddi2, Description = Protein DDI1 homolog 2, PFAM = PF00240;PF09668;PF00627)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf04998_88295-107752' '(at3g02540 : 422.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23C (RAD23C); FUNCTIONS IN: ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT5G38470.1). & (gnl|cdd|35235 : 369.0) no description available & (q40742|rad23_orysa : 350.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (gnl|cdd|29207 : 111.0) no description available & (reliability: 844.0) & (original description: Putative RAD1, Description = Putative DNA repair protein, PFAM = PF00240;PF00627;PF00627;PF09280)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf05322_35601-39896' '(at5g55160 : 158.0) Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays.; small ubiquitin-like modifier 2 (SUMO2); CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: small ubiquitin-like modifier 1 (TAIR:AT4G26840.1); Has 1114 Blast hits to 1111 proteins in 233 species: Archae - 0; Bacteria - 0; Metazoa - 633; Fungi - 141; Plants - 223; Viruses - 1; Other Eukaryotes - 116 (source: NCBI BLink). & (p55857|smt3_orysa : 154.0) Ubiquitin-like protein SMT3 - Oryza sativa (Rice) & (gnl|cdd|36980 : 130.0) no description available & (gnl|cdd|29166 : 130.0) no description available & (reliability: 316.0) & (original description: Putative SUMO2, Description = Small ubiquitin-related modifier 2, PFAM = PF11976)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf05688_313968-319322' '(at1g31340 : 183.0) Encodes a ubiquitin-related protein that is conjugated to target proteins by neddylation. It has been shown to be conjugated to the cullin AtCUL1. The RUB-conjugation pathway has been implicated in in auxin response.; related to ubiquitin 1 (RUB1); INVOLVED IN: protein modification process, response to auxin stimulus, protein neddylation, ethylene biosynthetic process, embryo development; LOCATED IN: plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 7 (TAIR:AT2G35635.1); Has 16064 Blast hits to 7349 proteins in 721 species: Archae - 0; Bacteria - 36; Metazoa - 7330; Fungi - 1879; Plants - 3570; Viruses - 331; Other Eukaryotes - 2918 (source: NCBI BLink). & (p69326|ubiq_wheat : 139.0) Ubiquitin - Triticum aestivum (Wheat) & (gnl|cdd|29205 : 138.0) no description available & (gnl|cdd|35227 : 134.0) no description available & (reliability: 364.0) & (original description: Putative ubb, Description = Polyubiquitin, PFAM = PF00240;PF00240)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf05692_448719-453143' '(at5g55160 : 158.0) Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays.; small ubiquitin-like modifier 2 (SUMO2); CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: small ubiquitin-like modifier 1 (TAIR:AT4G26840.1); Has 1114 Blast hits to 1111 proteins in 233 species: Archae - 0; Bacteria - 0; Metazoa - 633; Fungi - 141; Plants - 223; Viruses - 1; Other Eukaryotes - 116 (source: NCBI BLink). & (p55857|smt3_orysa : 150.0) Ubiquitin-like protein SMT3 - Oryza sativa (Rice) & (gnl|cdd|36980 : 130.0) no description available & (gnl|cdd|29166 : 129.0) no description available & (reliability: 316.0) & (original description: Putative sumo, Description = Small ubiquitin-related modifier, PFAM = PF11976)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf05822_702160-708864' '(at1g68185 : 149.0) Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin supergroup (InterPro:IPR019955); Has 482 Blast hits to 482 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 186; Fungi - 88; Plants - 146; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative At1g68185, Description = At1g68185, PFAM = PF11976)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf06123_604040-640334' '(at5g20620 : 657.0) encodes a ubiquitin polyprotein.; ubiquitin 4 (UBQ4); INVOLVED IN: protein modification process, protein ubiquitination involved in ubiquitin-dependent protein catabolic process, ubiquitin-dependent protein catabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: polyubiquitin 10 (TAIR:AT4G05320.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29205 : 137.0) no description available & (gnl|cdd|35228 : 135.0) no description available & (p69326|ubiq_wheat : 134.0) Ubiquitin - Triticum aestivum (Wheat) & (reliability: 1314.0) & (original description: Putative UBQ4, Description = Polyubiquitin 4, PFAM = PF00240;PF00240;PF00240;PF00240;PF00240)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf06602_1-2041' '(at2g32350 : 245.0) Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G05230.1); Has 234 Blast hits to 197 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 37; Fungi - 4; Plants - 98; Viruses - 14; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 490.0) & (original description: Putative , Description = , PFAM = PF00240;PF00240;PF00240)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf08112_169656-172324' '(at4g01000 : 117.0) Ubiquitin-like superfamily protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626); BEST Arabidopsis thaliana protein match is: ubiquitin family protein (TAIR:AT3G06455.1); Has 9247 Blast hits to 4627 proteins in 669 species: Archae - 0; Bacteria - 50; Metazoa - 4022; Fungi - 1172; Plants - 2220; Viruses - 170; Other Eukaryotes - 1613 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative sde2, Description = Protein SDE2, PFAM = PF13019)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf08597_133284-138605' '(p55857|smt3_orysa : 92.8) Ubiquitin-like protein SMT3 - Oryza sativa (Rice) & (at4g26840 : 90.5) Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets.; small ubiquitin-like modifier 1 (SUMO1); CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: small ubiquitin-like modifier 2 (TAIR:AT5G55160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative smt3, Description = SUMO, PFAM = PF11976)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf08711_111410-113628' '(at3g45180 : 128.0) Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin-like protein 5 (TAIR:AT5G42300.1); Has 399 Blast hits to 399 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 169; Fungi - 99; Plants - 81; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|29193 : 125.0) no description available & (gnl|cdd|38703 : 117.0) no description available & (reliability: 256.0) & (original description: Putative UBL5, Description = Ubiquitin-like protein 5, PFAM = PF00240)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf08755_210869-220685' '(at4g24990 : 162.0) geranylgeranylated protein ATGP4; ATGP4; FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Membrane-anchored ubiquitin-fold protein, HCG-1 (InterPro:IPR017000), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: membrane-anchored ubiquitin-fold protein 4 precursor (TAIR:AT3G26980.1); Has 159 Blast hits to 159 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|29216 : 149.0) no description available & (q7xru4|mub4_orysa : 140.0) Membrane-anchored ubiquitin-fold protein 4 precursor (Membrane-anchored ub-fold protein 4) (OsMUB4) - Oryza sativa (Rice) & (reliability: 324.0) & (original description: Putative MUB3, Description = Membrane-anchored ubiquitin-fold protein 3, PFAM = PF13881)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf09372_79342-89932' '(at3g02540 : 441.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23C (RAD23C); FUNCTIONS IN: ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT5G38470.1). & (q40742|rad23_orysa : 370.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (gnl|cdd|35235 : 361.0) no description available & (gnl|cdd|29207 : 111.0) no description available & (reliability: 882.0) & (original description: Putative RAD23C, Description = Ubiquitin receptor RAD23c, PFAM = PF09280;PF00240;PF00627;PF00627)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf10768_57045-61434' '(at5g57860 : 128.0) Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39695 : 91.3) no description available & (reliability: 256.0) & (original description: Putative ZOSMA_14G01640, Description = Transcription elongation factor B polypeptide 2, PFAM = PF00240)' T '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'niben101scf20506_151104-158811' '(at2g35360 : 239.0) ubiquitin family protein; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), Domain of unknown function SAYSvFN (InterPro:IPR019387); Has 81 Blast hits to 81 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 40; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|38459 : 158.0) no description available & (reliability: 478.0) & (original description: Putative BnaA05g34930D, Description = BnaA05g34930D protein, PFAM = PF10260)' T '29.5.11.2' 'protein.degradation.ubiquitin.E1' 'nbv0.3scaffold10420_34048-43546' '(at2g30110 : 1665.0) Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. Mutant is able to revert the constitutive defense responses phenotype of snc1, which indicates the gene is involved in defense response. It also indicates that ubiquitination plays a role in plant defense signalling.; ubiquitin-activating enzyme 1 (UBA1); FUNCTIONS IN: ubiquitin-protein ligase activity, ubiquitin activating enzyme activity; INVOLVED IN: response to cadmium ion, response to other organism, protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-activating enzyme, E1, active site (InterPro:IPR018074), Ubiquitin-activating enzyme, E1 (InterPro:IPR018075), Ubiquitin-activating enzyme e1, C-terminal (InterPro:IPR018965), Ubiquitin-activating enzyme repeat (InterPro:IPR000127), Ubiquitin-activating enzyme (InterPro:IPR019572), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040), Ubiquitin-activating enzyme, E1-like (InterPro:IPR000011); BEST Arabidopsis thaliana protein match is: ubiquitin activating enzyme 2 (TAIR:AT5G06460.1); Has 19490 Blast hits to 12603 proteins in 2346 species: Archae - 393; Bacteria - 11015; Metazoa - 2131; Fungi - 1366; Plants - 791; Viruses - 0; Other Eukaryotes - 3794 (source: NCBI BLink). & (p31251|ube12_wheat : 1607.0) Ubiquitin-activating enzyme E1 2 - Triticum aestivum (Wheat) & (gnl|cdd|37223 : 1468.0) no description available & (gnl|cdd|73269 : 467.0) no description available & (reliability: 3330.0) & (original description: Putative ptr3, Description = Ubiquitin-activating enzyme E1, PFAM = PF16190;PF09358;PF00899;PF00899;PF16191;PF10585)' T '29.5.11.2' 'protein.degradation.ubiquitin.E1' 'nbv0.3scaffold13974_1-11499' '(at2g21470 : 866.0) Encodes one of the two subunits of the SUMO activation enzyme required during sumolation. Sumolation is a post-translational protein modification process similar to ubiquitination during which a polypeptide (SUMO) is covalently attached to a target protein.; SUMO-activating enzyme 2 (SAE2); CONTAINS InterPro DOMAIN/s: Ubiquitin-activating enzyme repeat (InterPro:IPR000127), Ubiquitin-activating enzyme (InterPro:IPR019572), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: E1 C-terminal related 1 (TAIR:AT5G19180.1). & (gnl|cdd|37224 : 571.0) no description available & (gnl|cdd|73268 : 377.0) no description available & (p20973|ube11_wheat : 121.0) Ubiquitin-activating enzyme E1 1 - Triticum aestivum (Wheat) & (reliability: 1732.0) & (original description: Putative uba2, Description = Sumo-activating enzyme subunit 2, PFAM = PF00899;PF10585;PF14732)' T '29.5.11.2' 'protein.degradation.ubiquitin.E1' 'nbv0.3scaffold14498_20391-23595' '(at5g19180 : 179.0) Encodes a subunit of a RUB-activating enzyme analogous to the E1 ubiquitin-activating enzyme. ECR1 functions as a heterodimer with AXR1 to activate RUB, a ubiquitin-related protein.; E1 C-terminal related 1 (ECR1); CONTAINS InterPro DOMAIN/s: Ubiquitin-activating enzyme repeat (InterPro:IPR000127), Ubiquitin-activating enzyme, E1, active site (InterPro:IPR018074), Ubiquitin-activating enzyme (InterPro:IPR019572), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040), E2 binding (InterPro:IPR014929); BEST Arabidopsis thaliana protein match is: SUMO-activating enzyme 2 (TAIR:AT2G21470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30117 : 167.0) no description available & (gnl|cdd|37226 : 130.0) no description available & (reliability: 358.0) & (original description: Putative uba3, Description = NEDD8-activating enzyme E1 catalytic subunit, PFAM = PF00899)' T '29.5.11.2' 'protein.degradation.ubiquitin.E1' 'nbv0.5scaffold1257_361273-373454' '(at2g21470 : 897.0) Encodes one of the two subunits of the SUMO activation enzyme required during sumolation. Sumolation is a post-translational protein modification process similar to ubiquitination during which a polypeptide (SUMO) is covalently attached to a target protein.; SUMO-activating enzyme 2 (SAE2); CONTAINS InterPro DOMAIN/s: Ubiquitin-activating enzyme repeat (InterPro:IPR000127), Ubiquitin-activating enzyme (InterPro:IPR019572), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: E1 C-terminal related 1 (TAIR:AT5G19180.1). & (gnl|cdd|37224 : 598.0) no description available & (gnl|cdd|73268 : 370.0) no description available & (p20973|ube11_wheat : 129.0) Ubiquitin-activating enzyme E1 1 - Triticum aestivum (Wheat) & (reliability: 1794.0) & (original description: Putative uba2, Description = Sumo-activating enzyme subunit 2, PFAM = PF00899;PF14732;PF10585)' T '29.5.11.2' 'protein.degradation.ubiquitin.E1' 'nbv0.5scaffold8164_3127-15207' '(at1g05180 : 824.0) Encodes a subunit of the RUB1 activating enzyme that regulates the protein degradation activity of Skp1-Cullin-Fbox complexes, primarily, but not exclusively, affecting auxin responses. Acts alongside AS1 to exclude BP expression from leaves.; AUXIN RESISTANT 1 (AXR1); CONTAINS InterPro DOMAIN/s: Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: AXR1-like (TAIR:AT2G32410.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37227 : 658.0) no description available & (gnl|cdd|73272 : 494.0) no description available & (reliability: 1546.0) & (original description: Putative AXR1, Description = NEDD8-activating enzyme E1 regulatory subunit AXR1, PFAM = PF00899)' T '29.5.11.2' 'protein.degradation.ubiquitin.E1' 'niben044scf00005828ctg000_5173-8833' '(at5g06460 : 186.0) Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined.; ubiquitin activating enzyme 2 (UBA 2); FUNCTIONS IN: ubiquitin-protein ligase activity, ubiquitin activating enzyme activity; INVOLVED IN: protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-activating enzyme, E1, active site (InterPro:IPR018074), Ubiquitin-activating enzyme, E1 (InterPro:IPR018075), Ubiquitin-activating enzyme e1, C-terminal (InterPro:IPR018965), Ubiquitin-activating enzyme repeat (InterPro:IPR000127), Ubiquitin-activating enzyme (InterPro:IPR019572), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040), Ubiquitin-activating enzyme, E1-like (InterPro:IPR000011); BEST Arabidopsis thaliana protein match is: ubiquitin-activating enzyme 1 (TAIR:AT2G30110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37223 : 183.0) no description available & (p20973|ube11_wheat : 175.0) Ubiquitin-activating enzyme E1 1 - Triticum aestivum (Wheat) & (gnl|cdd|73270 : 158.0) no description available & (reliability: 372.0) & (original description: Putative ptr3, Description = Ubiquitin-activating enzyme E1, PFAM = PF00899)' T '29.5.11.2' 'protein.degradation.ubiquitin.E1' 'niben101scf00338_640323-649824' '(at5g50680 : 430.0) Encodes a protein that is part of a heterodimeric SUMO E1 activating enzyme.; SUMO activating enzyme 1B (SAE1B); CONTAINS InterPro DOMAIN/s: Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: SUMO-activating enzyme 1B (TAIR:AT5G50580.1); Has 4947 Blast hits to 4294 proteins in 1121 species: Archae - 94; Bacteria - 1869; Metazoa - 1154; Fungi - 667; Plants - 410; Viruses - 0; Other Eukaryotes - 753 (source: NCBI BLink). & (gnl|cdd|37225 : 313.0) no description available & (gnl|cdd|73271 : 178.0) no description available & (p20973|ube11_wheat : 82.0) Ubiquitin-activating enzyme E1 1 - Triticum aestivum (Wheat) & (reliability: 860.0) & (original description: Putative Sb53, Description = Pco115798, PFAM = PF00899)' T '29.5.11.2' 'protein.degradation.ubiquitin.E1' 'niben101scf01520_686080-695658' '(at5g19180 : 663.0) Encodes a subunit of a RUB-activating enzyme analogous to the E1 ubiquitin-activating enzyme. ECR1 functions as a heterodimer with AXR1 to activate RUB, a ubiquitin-related protein.; E1 C-terminal related 1 (ECR1); CONTAINS InterPro DOMAIN/s: Ubiquitin-activating enzyme repeat (InterPro:IPR000127), Ubiquitin-activating enzyme, E1, active site (InterPro:IPR018074), Ubiquitin-activating enzyme (InterPro:IPR019572), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040), E2 binding (InterPro:IPR014929); BEST Arabidopsis thaliana protein match is: SUMO-activating enzyme 2 (TAIR:AT2G21470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30117 : 497.0) no description available & (gnl|cdd|37226 : 421.0) no description available & (p31251|ube12_wheat : 105.0) Ubiquitin-activating enzyme E1 2 - Triticum aestivum (Wheat) & (reliability: 1326.0) & (original description: Putative ECR1, Description = NEDD8-activating enzyme E1 catalytic subunit, PFAM = PF08825;PF00899)' T '29.5.11.2' 'protein.degradation.ubiquitin.E1' 'niben101scf02543_319022-342629' '(at1g05180 : 841.0) Encodes a subunit of the RUB1 activating enzyme that regulates the protein degradation activity of Skp1-Cullin-Fbox complexes, primarily, but not exclusively, affecting auxin responses. Acts alongside AS1 to exclude BP expression from leaves.; AUXIN RESISTANT 1 (AXR1); CONTAINS InterPro DOMAIN/s: Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: AXR1-like (TAIR:AT2G32410.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37227 : 684.0) no description available & (gnl|cdd|73272 : 512.0) no description available & (reliability: 1584.0) & (original description: Putative AXR1, Description = NEDD8-activating enzyme E1 regulatory subunit AXR1, PFAM = PF00899)' T '29.5.11.2' 'protein.degradation.ubiquitin.E1' 'niben101scf03202_1318720-1326496' '(at5g06460 : 1717.0) Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined.; ubiquitin activating enzyme 2 (UBA 2); FUNCTIONS IN: ubiquitin-protein ligase activity, ubiquitin activating enzyme activity; INVOLVED IN: protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-activating enzyme, E1, active site (InterPro:IPR018074), Ubiquitin-activating enzyme, E1 (InterPro:IPR018075), Ubiquitin-activating enzyme e1, C-terminal (InterPro:IPR018965), Ubiquitin-activating enzyme repeat (InterPro:IPR000127), Ubiquitin-activating enzyme (InterPro:IPR019572), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040), Ubiquitin-activating enzyme, E1-like (InterPro:IPR000011); BEST Arabidopsis thaliana protein match is: ubiquitin-activating enzyme 1 (TAIR:AT2G30110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p20973|ube11_wheat : 1716.0) Ubiquitin-activating enzyme E1 1 - Triticum aestivum (Wheat) & (gnl|cdd|37223 : 1464.0) no description available & (gnl|cdd|73269 : 455.0) no description available & (reliability: 3434.0) & (original description: Putative UBA1, Description = Ubiquitin-activating enzyme E1 1, PFAM = PF16191;PF16190;PF09358;PF00899;PF00899;PF10585)' T '29.5.11.2' 'protein.degradation.ubiquitin.E1' 'niben101scf03671_333861-337957' '(at5g19180 : 185.0) Encodes a subunit of a RUB-activating enzyme analogous to the E1 ubiquitin-activating enzyme. ECR1 functions as a heterodimer with AXR1 to activate RUB, a ubiquitin-related protein.; E1 C-terminal related 1 (ECR1); CONTAINS InterPro DOMAIN/s: Ubiquitin-activating enzyme repeat (InterPro:IPR000127), Ubiquitin-activating enzyme, E1, active site (InterPro:IPR018074), Ubiquitin-activating enzyme (InterPro:IPR019572), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040), E2 binding (InterPro:IPR014929); BEST Arabidopsis thaliana protein match is: SUMO-activating enzyme 2 (TAIR:AT2G21470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30117 : 169.0) no description available & (gnl|cdd|37226 : 133.0) no description available & (reliability: 370.0) & (original description: Putative uba3, Description = NEDD8-activating enzyme E1 catalytic subunit, PFAM = PF00899)' T '29.5.11.2' 'protein.degradation.ubiquitin.E1' 'niben101scf09017_4939-14418' '(at2g30110 : 1697.0) Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. Mutant is able to revert the constitutive defense responses phenotype of snc1, which indicates the gene is involved in defense response. It also indicates that ubiquitination plays a role in plant defense signalling.; ubiquitin-activating enzyme 1 (UBA1); FUNCTIONS IN: ubiquitin-protein ligase activity, ubiquitin activating enzyme activity; INVOLVED IN: response to cadmium ion, response to other organism, protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-activating enzyme, E1, active site (InterPro:IPR018074), Ubiquitin-activating enzyme, E1 (InterPro:IPR018075), Ubiquitin-activating enzyme e1, C-terminal (InterPro:IPR018965), Ubiquitin-activating enzyme repeat (InterPro:IPR000127), Ubiquitin-activating enzyme (InterPro:IPR019572), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040), Ubiquitin-activating enzyme, E1-like (InterPro:IPR000011); BEST Arabidopsis thaliana protein match is: ubiquitin activating enzyme 2 (TAIR:AT5G06460.1); Has 19490 Blast hits to 12603 proteins in 2346 species: Archae - 393; Bacteria - 11015; Metazoa - 2131; Fungi - 1366; Plants - 791; Viruses - 0; Other Eukaryotes - 3794 (source: NCBI BLink). & (p31251|ube12_wheat : 1637.0) Ubiquitin-activating enzyme E1 2 - Triticum aestivum (Wheat) & (gnl|cdd|37223 : 1489.0) no description available & (gnl|cdd|73269 : 470.0) no description available & (reliability: 3394.0) & (original description: Putative ptr3, Description = Ubiquitin-activating enzyme E1, PFAM = PF16190;PF00899;PF00899;PF09358;PF16191;PF10585)' T '29.5.11.2' 'protein.degradation.ubiquitin.E1' 'niben101scf11306_45694-54011' '(at5g06460 : 1704.0) Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined.; ubiquitin activating enzyme 2 (UBA 2); FUNCTIONS IN: ubiquitin-protein ligase activity, ubiquitin activating enzyme activity; INVOLVED IN: protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-activating enzyme, E1, active site (InterPro:IPR018074), Ubiquitin-activating enzyme, E1 (InterPro:IPR018075), Ubiquitin-activating enzyme e1, C-terminal (InterPro:IPR018965), Ubiquitin-activating enzyme repeat (InterPro:IPR000127), Ubiquitin-activating enzyme (InterPro:IPR019572), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040), Ubiquitin-activating enzyme, E1-like (InterPro:IPR000011); BEST Arabidopsis thaliana protein match is: ubiquitin-activating enzyme 1 (TAIR:AT2G30110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p20973|ube11_wheat : 1700.0) Ubiquitin-activating enzyme E1 1 - Triticum aestivum (Wheat) & (gnl|cdd|37223 : 1460.0) no description available & (gnl|cdd|73269 : 453.0) no description available & (reliability: 3408.0) & (original description: Putative UBA1, Description = Ubiquitin-like modifier-activating enzyme 1, PFAM = PF16191;PF16190;PF09358;PF00899;PF00899;PF10585)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'nbv0.3scaffold2644_57872-67112' '(at3g15355 : 335.0) ubiquitin-conjugating enzyme 25 (UBC25); FUNCTIONS IN: small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein (TAIR:AT1G53025.1); Has 6168 Blast hits to 6144 proteins in 365 species: Archae - 0; Bacteria - 0; Metazoa - 2619; Fungi - 1243; Plants - 1332; Viruses - 17; Other Eukaryotes - 957 (source: NCBI BLink). & (gnl|cdd|36113 : 309.0) no description available & (gnl|cdd|29157 : 113.0) no description available & (reliability: 670.0) & (original description: Putative birc6, Description = Ubiquitin-conjugating enzyme E2 O, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'nbv0.3scaffold8782_4375-8230' '(at1g64230 : 261.0) ubiquitin-conjugating enzyme 28 (UBC28); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin conjugating enzyme 8 (TAIR:AT5G41700.5). & (gnl|cdd|35638 : 232.0) no description available & (gnl|cdd|34682 : 188.0) no description available & (p25866|ubc2_wheat : 122.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (reliability: 522.0) & (original description: Putative eff, Description = Ubiquitin-conjugating enzyme E2-17 kDa, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'nbv0.3scaffold13583_8896-16998' '(gnl|cdd|35648 : 298.0) no description available & (at1g75440 : 258.0) ubiquitin-conjugating enzyme 16 (UBC16); FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 18 (TAIR:AT5G42990.1); Has 8796 Blast hits to 8793 proteins in 382 species: Archae - 0; Bacteria - 2; Metazoa - 3895; Fungi - 1929; Plants - 1614; Viruses - 20; Other Eukaryotes - 1336 (source: NCBI BLink). & (gnl|cdd|84587 : 138.0) no description available & (reliability: 516.0) & (original description: Putative UBC16, Description = Probable ubiquitin-conjugating enzyme E2 16, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'nbv0.3scaffold27204_18646-21689' '(at4g27960 : 168.0) ubiquitin conjugating enzyme; ubiquitin conjugating enzyme 9 (UBC9); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 10 (TAIR:AT5G53300.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35638 : 151.0) no description available & (gnl|cdd|34682 : 117.0) no description available & (p25866|ubc2_wheat : 83.2) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (reliability: 336.0) & (original description: Putative eff, Description = Ubiquitin-conjugating enzyme E2-17 kDa, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'nbv0.3scaffold27204_23778-26552' '(at5g41700 : 137.0) One of the polypeptides that constitute the ubiquitin-conjugating enzyme E2; ubiquitin conjugating enzyme 8 (UBC8); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 28 (TAIR:AT1G64230.2). & (gnl|cdd|35638 : 118.0) no description available & (gnl|cdd|34682 : 104.0) no description available & (reliability: 274.0) & (original description: Putative eff, Description = Ubiquitin-conjugating enzyme E2-17 kDa, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'nbv0.3scaffold27605_18767-23008' '(at5g25760 : 309.0) mutant displays sucrose-dependent seedling development and reduced lateral root production. PEX4 interacts with PEX22 in a yeast two-hybrid. Necessary for peroxisome biogenesis. The PEX4 and PEX22 pair may be important during the remodeling of peroxisome matrix contents as glyoxysomes transition to leaf peroxisomes.; peroxin4 (PEX4); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 29 (TAIR:AT2G16740.1); Has 10357 Blast hits to 10353 proteins in 397 species: Archae - 0; Bacteria - 2; Metazoa - 4640; Fungi - 2157; Plants - 1900; Viruses - 24; Other Eukaryotes - 1634 (source: NCBI BLink). & (gnl|cdd|35638 : 180.0) no description available & (gnl|cdd|34682 : 158.0) no description available & (p35130|ubc2_medsa : 111.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (reliability: 618.0) & (original description: Putative PEX4, Description = Protein PEROXIN-4, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'nbv0.3scaffold28238_1-9661' '(gnl|cdd|35646 : 292.0) no description available & (at5g59300 : 258.0) ubiquitin conjugating enzyme E2; ubiquitin carrier protein 7 (UBC7); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 13 (TAIR:AT3G46460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p25868|ubc7_wheat : 220.0) Ubiquitin-conjugating enzyme E2 7 (EC 6.3.2.19) (Ubiquitin-protein ligase 7) (Ubiquitin carrier protein 7) - Triticum aestivum (Wheat) & (gnl|cdd|84587 : 187.0) no description available & (reliability: 516.0) & (original description: Putative UBC13, Description = Ubiquitin-conjugating enzyme E2 13, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'nbv0.3scaffold33819_4644-10085' '(at1g63800 : 283.0) ubiquitin-conjugating enzyme 5 (UBC5); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), Ubiquitin-conjugating enzyme (InterPro:IPR015581); BEST Arabidopsis thaliana protein match is: ubiquitin conjugating enzyme 4 (TAIR:AT5G41340.1); Has 8752 Blast hits to 8751 proteins in 386 species: Archae - 0; Bacteria - 0; Metazoa - 4011; Fungi - 1743; Plants - 1591; Viruses - 20; Other Eukaryotes - 1387 (source: NCBI BLink). & (p16577|ubc4_wheat : 281.0) Ubiquitin-conjugating enzyme E2-23 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (gnl|cdd|35637 : 277.0) no description available & (gnl|cdd|84587 : 144.0) no description available & (reliability: 566.0) & (original description: Putative UBC5, Description = Ubiquitin-conjugating enzyme E2 5, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'nbv0.3scaffold71122_1-6702' '(gnl|cdd|35646 : 217.0) no description available & (at5g59300 : 198.0) ubiquitin conjugating enzyme E2; ubiquitin carrier protein 7 (UBC7); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 13 (TAIR:AT3G46460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p25868|ubc7_wheat : 179.0) Ubiquitin-conjugating enzyme E2 7 (EC 6.3.2.19) (Ubiquitin-protein ligase 7) (Ubiquitin carrier protein 7) - Triticum aestivum (Wheat) & (gnl|cdd|84587 : 139.0) no description available & (reliability: 396.0) & (original description: Putative csu204(uce), Description = Putative ubiquitin-conjugating enzyme family, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'nbv0.3scaffold92960_885-4980' '(at1g53025 : 358.0) Ubiquitin-conjugating enzyme family protein; FUNCTIONS IN: small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 25 (TAIR:AT3G15355.1). & (gnl|cdd|36113 : 323.0) no description available & (gnl|cdd|29157 : 115.0) no description available & (reliability: 684.0) & (original description: Putative UBC38, Description = Putative ubiquitin-conjugating enzyme E2 38, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'nbv0.5scaffold2041_258462-265433' '(at3g17000 : 259.0) ubiquitin-conjugating enzyme 32 (UBC32); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 34 (TAIR:AT1G17280.2); Has 7916 Blast hits to 7914 proteins in 379 species: Archae - 0; Bacteria - 0; Metazoa - 3544; Fungi - 1602; Plants - 1492; Viruses - 20; Other Eukaryotes - 1258 (source: NCBI BLink). & (gnl|cdd|35649 : 239.0) no description available & (gnl|cdd|29157 : 91.1) no description available & (reliability: 518.0) & (original description: Putative UBC32, Description = Ubiquitin-conjugating enzyme E2 32, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben044scf00000372ctg007_2613-5212' '(at2g02760 : 291.0) ubiquitin conjugating enzyme UBC2. Homolog of the yeast RAD6 gene.; ubiquiting-conjugating enzyme 2 (UBC2); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin carrier protein 1 (TAIR:AT1G14400.2); Has 10642 Blast hits to 10588 proteins in 402 species: Archae - 0; Bacteria - 2; Metazoa - 4556; Fungi - 2331; Plants - 2015; Viruses - 26; Other Eukaryotes - 1712 (source: NCBI BLink). & (p35130|ubc2_medsa : 291.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (gnl|cdd|35640 : 272.0) no description available & (gnl|cdd|34682 : 197.0) no description available & (reliability: 582.0) & (original description: Putative UBC2, Description = Ubiquitin-conjugating enzyme E2 2, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben044scf00003232ctg008_1-4376' '(at3g17000 : 216.0) ubiquitin-conjugating enzyme 32 (UBC32); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 34 (TAIR:AT1G17280.2); Has 7916 Blast hits to 7914 proteins in 379 species: Archae - 0; Bacteria - 0; Metazoa - 3544; Fungi - 1602; Plants - 1492; Viruses - 20; Other Eukaryotes - 1258 (source: NCBI BLink). & (gnl|cdd|35649 : 203.0) no description available & (gnl|cdd|29157 : 109.0) no description available & (reliability: 432.0) & (original description: Putative ube2j1, Description = Ubiquitin-conjugating enzyme E2 J1, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben044scf00008446ctg003_24091-29867' '(at1g63800 : 220.0) ubiquitin-conjugating enzyme 5 (UBC5); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), Ubiquitin-conjugating enzyme (InterPro:IPR015581); BEST Arabidopsis thaliana protein match is: ubiquitin conjugating enzyme 4 (TAIR:AT5G41340.1); Has 8752 Blast hits to 8751 proteins in 386 species: Archae - 0; Bacteria - 0; Metazoa - 4011; Fungi - 1743; Plants - 1591; Viruses - 20; Other Eukaryotes - 1387 (source: NCBI BLink). & (gnl|cdd|35637 : 217.0) no description available & (p16577|ubc4_wheat : 213.0) Ubiquitin-conjugating enzyme E2-23 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (gnl|cdd|34682 : 123.0) no description available & (reliability: 440.0) & (original description: Putative ubc8, Description = Ubiquitin-conjugating enzyme E2 8, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben044scf00034019ctg001_11850-20877' '(at3g58460 : 471.0) RHOMBOID-like protein 15 (RBL15); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 14 (TAIR:AT3G17611.1). & (gnl|cdd|37843 : 182.0) no description available & (gnl|cdd|85618 : 80.3) no description available & (reliability: 942.0) & (original description: Putative RBL15, Description = Rhomboid-like protein 15, PFAM = PF01694;PF00627)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben044scf00038557ctg006_1-3892' '(at1g64230 : 261.0) ubiquitin-conjugating enzyme 28 (UBC28); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin conjugating enzyme 8 (TAIR:AT5G41700.5). & (gnl|cdd|35638 : 232.0) no description available & (gnl|cdd|34682 : 188.0) no description available & (p25866|ubc2_wheat : 122.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (reliability: 522.0) & (original description: Putative UB2D1, Description = Ubiquitin-conjugating enzyme E2 D1, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben044scf00045655ctg005_3557-11990' '(at3g52560 : 244.0) ubiquitin E2 variant 1D-4 (UEV1D-4); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: MMS ZWEI homologue 3 (TAIR:AT2G36060.2). & (gnl|cdd|36114 : 212.0) no description available & (gnl|cdd|34682 : 82.6) no description available & (reliability: 488.0) & (original description: Putative UEV1D, Description = Ubiquitin-conjugating enzyme E2 variant 1D, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben044scf00053095ctg000_4987-9678' '(at3g57870 : 298.0) Encodes a SUMO liagse that directs the attachment of the small protein SUMO to target proteins via an isopeptide bond. This enzyme is localized to the nucleus and plants with reduced levels of this protein show higher sensitivity to ABA in root growth inhibition assays. It has high similarity to the yeast UBC9 SUMO ligase and is sometimes referred to by that name.; sumo conjugation enzyme 1 (SCE1); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquiting-conjugating enzyme 2 (TAIR:AT2G02760.1); Has 9584 Blast hits to 9566 proteins in 388 species: Archae - 0; Bacteria - 0; Metazoa - 4206; Fungi - 2037; Plants - 1834; Viruses - 20; Other Eukaryotes - 1487 (source: NCBI BLink). & (gnl|cdd|35645 : 252.0) no description available & (gnl|cdd|34682 : 172.0) no description available & (p35130|ubc2_medsa : 113.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (reliability: 596.0) & (original description: Putative SCE1, Description = SUMO-conjugating enzyme SCE1, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf00050_298999-303576' '(at4g27960 : 268.0) ubiquitin conjugating enzyme; ubiquitin conjugating enzyme 9 (UBC9); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 10 (TAIR:AT5G53300.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35638 : 252.0) no description available & (gnl|cdd|34682 : 203.0) no description available & (p25866|ubc2_wheat : 133.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (reliability: 536.0) & (original description: Putative eff, Description = Ubiquitin-conjugating enzyme E2-17 kDa, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf00262_466847-471982' '(at4g27960 : 290.0) ubiquitin conjugating enzyme; ubiquitin conjugating enzyme 9 (UBC9); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 10 (TAIR:AT5G53300.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35638 : 261.0) no description available & (gnl|cdd|34682 : 212.0) no description available & (p35130|ubc2_medsa : 137.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (reliability: 580.0) & (original description: Putative eff, Description = Ubiquitin-conjugating enzyme E2-17 kDa, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf00449_603497-610238' '(gnl|cdd|35646 : 289.0) no description available & (at5g59300 : 253.0) ubiquitin conjugating enzyme E2; ubiquitin carrier protein 7 (UBC7); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 13 (TAIR:AT3G46460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p25868|ubc7_wheat : 216.0) Ubiquitin-conjugating enzyme E2 7 (EC 6.3.2.19) (Ubiquitin-protein ligase 7) (Ubiquitin carrier protein 7) - Triticum aestivum (Wheat) & (gnl|cdd|84587 : 187.0) no description available & (reliability: 506.0) & (original description: Putative UBC13, Description = Ubiquitin-conjugating enzyme E2 13, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf00503_758765-764661' '(at4g27960 : 288.0) ubiquitin conjugating enzyme; ubiquitin conjugating enzyme 9 (UBC9); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 10 (TAIR:AT5G53300.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35638 : 261.0) no description available & (gnl|cdd|34682 : 212.0) no description available & (p25866|ubc2_wheat : 137.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (reliability: 576.0) & (original description: Putative UBC5A, Description = Ubiquitin-conjugating enzyme E2 5A, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf00530_7409-13971' '(at4g27960 : 288.0) ubiquitin conjugating enzyme; ubiquitin conjugating enzyme 9 (UBC9); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 10 (TAIR:AT5G53300.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35638 : 255.0) no description available & (gnl|cdd|34682 : 207.0) no description available & (p25866|ubc2_wheat : 135.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (reliability: 576.0) & (original description: Putative eff, Description = Ubiquitin-conjugating enzyme E2-17 kDa, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf00929_403508-409337' '(at4g36800 : 336.0) RUB1 conjugating enzyme that conjugates CUL1 and is involved in auxin response and embryogenesis. RCE1 protein physically interacts with RBX1, which may be the E3 for CUL1.; RUB1 conjugating enzyme 1 (RCE1); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), RUB1 conjugating enzyme Ubc12 (InterPro:IPR015580); BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein (TAIR:AT2G18600.1); Has 8473 Blast hits to 8470 proteins in 386 species: Archae - 0; Bacteria - 0; Metazoa - 3871; Fungi - 1731; Plants - 1533; Viruses - 20; Other Eukaryotes - 1318 (source: NCBI BLink). & (gnl|cdd|35641 : 282.0) no description available & (gnl|cdd|84587 : 146.0) no description available & (p35130|ubc2_medsa : 83.6) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (reliability: 672.0) & (original description: Putative RCE1, Description = NEDD8-conjugating enzyme Ubc12, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf01002_1348436-1356058' '(at1g78870 : 291.0) UBC35/UBC13A encodes a protein that may play a role in DNA damage responses and error-free post-replicative DNA repair by participating in lysine-63-based polyubiquitination reactions. UBC35/UBC13A can form diubiquitin and triubiquitin chains in combination with MMZ1,2,3,4/(UEV1A,B,C,D) in vitro. It can also functionally complement an mms2 ubc13 mutation in budding yeast by increasing the double mutant's viability in the presence of the DNA damaging agent MMS, when it is co-expressed with MMZ / UEV1 genes. A wild type phenotype is restored with MMZ3/UEV1C and MMZ4/UEV1D, but only partial complementation is achieved with MMZ1/UEV1A or MMZ2/UEV1B.; ubiquitin-conjugating enzyme 35 (UBC35); FUNCTIONS IN: ubiquitin-protein ligase activity, protein binding; INVOLVED IN: root epidermal cell differentiation, response to cadmium ion, postreplication repair, response to iron ion, ubiquitin-dependent protein catabolic process; LOCATED IN: UBC13-MMS2 complex; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 36 (TAIR:AT1G16890.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35638 : 228.0) no description available & (gnl|cdd|34682 : 187.0) no description available & (p25866|ubc2_wheat : 121.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (reliability: 582.0) & (original description: Putative UBC35, Description = Ubiquitin-conjugating enzyme E2 35, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf01033_273862-283284' '(at1g70650 : 247.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding, small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: mitochondrion, intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: MMS ZWEI homologue 2 (TAIR:AT1G70660.1). & (gnl|cdd|36114 : 206.0) no description available & (gnl|cdd|34682 : 90.7) no description available & (reliability: 492.0) & (original description: Putative UEV1B, Description = Ubiquitin-conjugating enzyme E2 variant 1B, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf01078_37453-44852' '(at3g57870 : 251.0) Encodes a SUMO liagse that directs the attachment of the small protein SUMO to target proteins via an isopeptide bond. This enzyme is localized to the nucleus and plants with reduced levels of this protein show higher sensitivity to ABA in root growth inhibition assays. It has high similarity to the yeast UBC9 SUMO ligase and is sometimes referred to by that name.; sumo conjugation enzyme 1 (SCE1); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquiting-conjugating enzyme 2 (TAIR:AT2G02760.1); Has 9584 Blast hits to 9566 proteins in 388 species: Archae - 0; Bacteria - 0; Metazoa - 4206; Fungi - 2037; Plants - 1834; Viruses - 20; Other Eukaryotes - 1487 (source: NCBI BLink). & (gnl|cdd|35645 : 223.0) no description available & (gnl|cdd|34682 : 158.0) no description available & (p35130|ubc2_medsa : 116.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (reliability: 502.0) & (original description: Putative hus5, Description = SUMO-conjugating enzyme, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf01085_324794-331853' '(at4g27960 : 290.0) ubiquitin conjugating enzyme; ubiquitin conjugating enzyme 9 (UBC9); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 10 (TAIR:AT5G53300.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35638 : 260.0) no description available & (gnl|cdd|34682 : 211.0) no description available & (p35130|ubc2_medsa : 137.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (reliability: 580.0) & (original description: Putative eff, Description = Ubiquitin-conjugating enzyme E2-17 kDa, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf01326_877273-885704' '(p25866|ubc2_wheat : 277.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (at2g02760 : 272.0) ubiquitin conjugating enzyme UBC2. Homolog of the yeast RAD6 gene.; ubiquiting-conjugating enzyme 2 (UBC2); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin carrier protein 1 (TAIR:AT1G14400.2); Has 10642 Blast hits to 10588 proteins in 402 species: Archae - 0; Bacteria - 2; Metazoa - 4556; Fungi - 2331; Plants - 2015; Viruses - 26; Other Eukaryotes - 1712 (source: NCBI BLink). & (gnl|cdd|35640 : 263.0) no description available & (gnl|cdd|34682 : 192.0) no description available & (reliability: 544.0) & (original description: Putative gpt1, Description = Ubiquitin-conjugating enzyme E2 2, PFAM = PF00179;PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf01664_263151-266387' '(at4g27960 : 276.0) ubiquitin conjugating enzyme; ubiquitin conjugating enzyme 9 (UBC9); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 10 (TAIR:AT5G53300.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35638 : 251.0) no description available & (gnl|cdd|34682 : 205.0) no description available & (p25866|ubc2_wheat : 132.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (reliability: 552.0) & (original description: Putative eff, Description = Ubiquitin-conjugating enzyme E2-17 kDa, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf01692_663055-669864' '(at3g57870 : 299.0) Encodes a SUMO liagse that directs the attachment of the small protein SUMO to target proteins via an isopeptide bond. This enzyme is localized to the nucleus and plants with reduced levels of this protein show higher sensitivity to ABA in root growth inhibition assays. It has high similarity to the yeast UBC9 SUMO ligase and is sometimes referred to by that name.; sumo conjugation enzyme 1 (SCE1); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquiting-conjugating enzyme 2 (TAIR:AT2G02760.1); Has 9584 Blast hits to 9566 proteins in 388 species: Archae - 0; Bacteria - 0; Metazoa - 4206; Fungi - 2037; Plants - 1834; Viruses - 20; Other Eukaryotes - 1487 (source: NCBI BLink). & (gnl|cdd|35645 : 252.0) no description available & (gnl|cdd|34682 : 173.0) no description available & (p35130|ubc2_medsa : 113.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (reliability: 598.0) & (original description: Putative SCE1, Description = SUMO-conjugating enzyme SCE1, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf01701_1294450-1300037' '(gnl|cdd|35648 : 293.0) no description available & (at5g42990 : 259.0) ubiquitin-conjugating enzyme 18 (UBC18); FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein (TAIR:AT1G45050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84587 : 138.0) no description available & (reliability: 518.0) & (original description: Putative UBC16, Description = Probable ubiquitin-conjugating enzyme E2 16, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf01817_177053-192611' '(at4g27960 : 200.0) ubiquitin conjugating enzyme; ubiquitin conjugating enzyme 9 (UBC9); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 10 (TAIR:AT5G53300.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35638 : 180.0) no description available & (gnl|cdd|34682 : 160.0) no description available & (p25866|ubc2_wheat : 96.3) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (reliability: 400.0) & (original description: Putative eff, Description = Ubiquitin-conjugating enzyme E2-17 kDa, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf01993_18464-24877' '(at3g52560 : 275.0) ubiquitin E2 variant 1D-4 (UEV1D-4); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: MMS ZWEI homologue 3 (TAIR:AT2G36060.2). & (gnl|cdd|36114 : 233.0) no description available & (gnl|cdd|34682 : 89.9) no description available & (reliability: 550.0) & (original description: Putative UEV1D, Description = Ubiquitin-conjugating enzyme E2 variant 1D, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf02111_1090688-1096980' '(at3g17000 : 301.0) ubiquitin-conjugating enzyme 32 (UBC32); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 34 (TAIR:AT1G17280.2); Has 7916 Blast hits to 7914 proteins in 379 species: Archae - 0; Bacteria - 0; Metazoa - 3544; Fungi - 1602; Plants - 1492; Viruses - 20; Other Eukaryotes - 1258 (source: NCBI BLink). & (gnl|cdd|35649 : 252.0) no description available & (gnl|cdd|29157 : 91.8) no description available & (reliability: 602.0) & (original description: Putative UBC32, Description = Ubiquitin-conjugating enzyme E2 32, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf02130_27573-32547' '(at3g57870 : 289.0) Encodes a SUMO liagse that directs the attachment of the small protein SUMO to target proteins via an isopeptide bond. This enzyme is localized to the nucleus and plants with reduced levels of this protein show higher sensitivity to ABA in root growth inhibition assays. It has high similarity to the yeast UBC9 SUMO ligase and is sometimes referred to by that name.; sumo conjugation enzyme 1 (SCE1); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquiting-conjugating enzyme 2 (TAIR:AT2G02760.1); Has 9584 Blast hits to 9566 proteins in 388 species: Archae - 0; Bacteria - 0; Metazoa - 4206; Fungi - 2037; Plants - 1834; Viruses - 20; Other Eukaryotes - 1487 (source: NCBI BLink). & (gnl|cdd|35645 : 249.0) no description available & (gnl|cdd|34682 : 174.0) no description available & (p35130|ubc2_medsa : 117.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (reliability: 578.0) & (original description: Putative hus5, Description = SUMO-conjugating enzyme, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf02253_319432-326090' '(p25866|ubc2_wheat : 293.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (at2g02760 : 291.0) ubiquitin conjugating enzyme UBC2. Homolog of the yeast RAD6 gene.; ubiquiting-conjugating enzyme 2 (UBC2); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin carrier protein 1 (TAIR:AT1G14400.2); Has 10642 Blast hits to 10588 proteins in 402 species: Archae - 0; Bacteria - 2; Metazoa - 4556; Fungi - 2331; Plants - 2015; Viruses - 26; Other Eukaryotes - 1712 (source: NCBI BLink). & (gnl|cdd|35640 : 274.0) no description available & (gnl|cdd|34682 : 199.0) no description available & (reliability: 582.0) & (original description: Putative UBC2, Description = Ubiquitin-conjugating enzyme E2 2, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf02297_214095-223491' '(at3g15355 : 335.0) ubiquitin-conjugating enzyme 25 (UBC25); FUNCTIONS IN: small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein (TAIR:AT1G53025.1); Has 6168 Blast hits to 6144 proteins in 365 species: Archae - 0; Bacteria - 0; Metazoa - 2619; Fungi - 1243; Plants - 1332; Viruses - 17; Other Eukaryotes - 957 (source: NCBI BLink). & (gnl|cdd|36113 : 310.0) no description available & (gnl|cdd|29157 : 112.0) no description available & (reliability: 670.0) & (original description: Putative UBC39, Description = Putative ubiquitin-conjugating enzyme E2 39, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf02575_26123-31650' '(at3g57870 : 262.0) Encodes a SUMO liagse that directs the attachment of the small protein SUMO to target proteins via an isopeptide bond. This enzyme is localized to the nucleus and plants with reduced levels of this protein show higher sensitivity to ABA in root growth inhibition assays. It has high similarity to the yeast UBC9 SUMO ligase and is sometimes referred to by that name.; sumo conjugation enzyme 1 (SCE1); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquiting-conjugating enzyme 2 (TAIR:AT2G02760.1); Has 9584 Blast hits to 9566 proteins in 388 species: Archae - 0; Bacteria - 0; Metazoa - 4206; Fungi - 2037; Plants - 1834; Viruses - 20; Other Eukaryotes - 1487 (source: NCBI BLink). & (gnl|cdd|35645 : 251.0) no description available & (gnl|cdd|34682 : 172.0) no description available & (p35130|ubc2_medsa : 91.3) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (reliability: 524.0) & (original description: Putative SCE1, Description = SUMO-conjugating enzyme SCE1, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf02602_55345-62498' '(at1g53025 : 356.0) Ubiquitin-conjugating enzyme family protein; FUNCTIONS IN: small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 25 (TAIR:AT3G15355.1). & (gnl|cdd|36113 : 321.0) no description available & (gnl|cdd|29157 : 121.0) no description available & (reliability: 704.0) & (original description: Putative UBC38, Description = Putative ubiquitin-conjugating enzyme E2 38, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf03194_240296-245635' '(p35130|ubc2_medsa : 291.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (at2g02760 : 290.0) ubiquitin conjugating enzyme UBC2. Homolog of the yeast RAD6 gene.; ubiquiting-conjugating enzyme 2 (UBC2); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin carrier protein 1 (TAIR:AT1G14400.2); Has 10642 Blast hits to 10588 proteins in 402 species: Archae - 0; Bacteria - 2; Metazoa - 4556; Fungi - 2331; Plants - 2015; Viruses - 26; Other Eukaryotes - 1712 (source: NCBI BLink). & (gnl|cdd|35640 : 274.0) no description available & (gnl|cdd|34682 : 197.0) no description available & (reliability: 580.0) & (original description: Putative UBC2, Description = Ubiquitin-conjugating enzyme E2 2, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf03223_13216-17794' '(at3g57870 : 290.0) Encodes a SUMO liagse that directs the attachment of the small protein SUMO to target proteins via an isopeptide bond. This enzyme is localized to the nucleus and plants with reduced levels of this protein show higher sensitivity to ABA in root growth inhibition assays. It has high similarity to the yeast UBC9 SUMO ligase and is sometimes referred to by that name.; sumo conjugation enzyme 1 (SCE1); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquiting-conjugating enzyme 2 (TAIR:AT2G02760.1); Has 9584 Blast hits to 9566 proteins in 388 species: Archae - 0; Bacteria - 0; Metazoa - 4206; Fungi - 2037; Plants - 1834; Viruses - 20; Other Eukaryotes - 1487 (source: NCBI BLink). & (gnl|cdd|35645 : 252.0) no description available & (gnl|cdd|34682 : 174.0) no description available & (p35130|ubc2_medsa : 119.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (reliability: 580.0) & (original description: Putative SCE1, Description = SUMO-conjugating enzyme SCE1, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf03445_120450-128784' '(at3g57870 : 199.0) Encodes a SUMO liagse that directs the attachment of the small protein SUMO to target proteins via an isopeptide bond. This enzyme is localized to the nucleus and plants with reduced levels of this protein show higher sensitivity to ABA in root growth inhibition assays. It has high similarity to the yeast UBC9 SUMO ligase and is sometimes referred to by that name.; sumo conjugation enzyme 1 (SCE1); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquiting-conjugating enzyme 2 (TAIR:AT2G02760.1); Has 9584 Blast hits to 9566 proteins in 388 species: Archae - 0; Bacteria - 0; Metazoa - 4206; Fungi - 2037; Plants - 1834; Viruses - 20; Other Eukaryotes - 1487 (source: NCBI BLink). & (gnl|cdd|35645 : 188.0) no description available & (gnl|cdd|84587 : 124.0) no description available & (reliability: 398.0) & (original description: Putative hus5, Description = SUMO-conjugating enzyme, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf03817_1357008-1361290' '(gnl|cdd|35637 : 272.0) no description available & (p16577|ubc4_wheat : 264.0) Ubiquitin-conjugating enzyme E2-23 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (at1g63800 : 258.0) ubiquitin-conjugating enzyme 5 (UBC5); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), Ubiquitin-conjugating enzyme (InterPro:IPR015581); BEST Arabidopsis thaliana protein match is: ubiquitin conjugating enzyme 4 (TAIR:AT5G41340.1); Has 8752 Blast hits to 8751 proteins in 386 species: Archae - 0; Bacteria - 0; Metazoa - 4011; Fungi - 1743; Plants - 1591; Viruses - 20; Other Eukaryotes - 1387 (source: NCBI BLink). & (gnl|cdd|34682 : 146.0) no description available & (reliability: 516.0) & (original description: Putative UBE2H, Description = Ubiquitin-conjugating enzyme E2 H, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf03842_100434-103250' '(at4g36800 : 241.0) RUB1 conjugating enzyme that conjugates CUL1 and is involved in auxin response and embryogenesis. RCE1 protein physically interacts with RBX1, which may be the E3 for CUL1.; RUB1 conjugating enzyme 1 (RCE1); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), RUB1 conjugating enzyme Ubc12 (InterPro:IPR015580); BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein (TAIR:AT2G18600.1); Has 8473 Blast hits to 8470 proteins in 386 species: Archae - 0; Bacteria - 0; Metazoa - 3871; Fungi - 1731; Plants - 1533; Viruses - 20; Other Eukaryotes - 1318 (source: NCBI BLink). & (gnl|cdd|35641 : 234.0) no description available & (gnl|cdd|84587 : 134.0) no description available & (reliability: 482.0) & (original description: Putative RCE1, Description = NEDD8-conjugating enzyme Ubc12, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf04007_219356-224756' '(at3g57870 : 288.0) Encodes a SUMO liagse that directs the attachment of the small protein SUMO to target proteins via an isopeptide bond. This enzyme is localized to the nucleus and plants with reduced levels of this protein show higher sensitivity to ABA in root growth inhibition assays. It has high similarity to the yeast UBC9 SUMO ligase and is sometimes referred to by that name.; sumo conjugation enzyme 1 (SCE1); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquiting-conjugating enzyme 2 (TAIR:AT2G02760.1); Has 9584 Blast hits to 9566 proteins in 388 species: Archae - 0; Bacteria - 0; Metazoa - 4206; Fungi - 2037; Plants - 1834; Viruses - 20; Other Eukaryotes - 1487 (source: NCBI BLink). & (gnl|cdd|35645 : 248.0) no description available & (gnl|cdd|34682 : 174.0) no description available & (p35130|ubc2_medsa : 114.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (reliability: 576.0) & (original description: Putative hus5, Description = SUMO-conjugating enzyme, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf04036_113882-120849' '(at1g16890 : 290.0) UBC36/UBC13B encodes a protein that may play a role in DNA damage responses and error-free post-replicative DNA repair. It can bind to the MMZ/UEV1 proteins in vitro.; ubiquitin-conjugating enzyme 36 (UBC36); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 35 (TAIR:AT1G78870.2). & (gnl|cdd|35638 : 227.0) no description available & (gnl|cdd|34682 : 186.0) no description available & (p25866|ubc2_wheat : 121.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (reliability: 580.0) & (original description: Putative UBC35, Description = Ubiquitin-conjugating enzyme E2 35, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf04436_780423-785054' '(at4g27960 : 290.0) ubiquitin conjugating enzyme; ubiquitin conjugating enzyme 9 (UBC9); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 10 (TAIR:AT5G53300.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35638 : 259.0) no description available & (gnl|cdd|34682 : 210.0) no description available & (p35130|ubc2_medsa : 137.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (reliability: 580.0) & (original description: Putative eff, Description = Ubiquitin-conjugating enzyme E2-17 kDa, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf04551_478747-486497' '(gnl|cdd|35648 : 277.0) no description available & (at5g42990 : 244.0) ubiquitin-conjugating enzyme 18 (UBC18); FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein (TAIR:AT1G45050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84587 : 132.0) no description available & (reliability: 488.0) & (original description: Putative UBC15, Description = Ubiquitin-conjugating enzyme 15, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf04899_309623-316799' '(at2g33770 : 804.0) Encodes a ubiquitin-conjugating E2 enzyme. UBC24 mRNA accumulation is suppressed by miR399f, miR399b and miR399c. Involved in phosphate starvation response.; phosphate 2 (PHO2); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 23 (TAIR:AT2G16920.1); Has 6405 Blast hits to 6302 proteins in 368 species: Archae - 0; Bacteria - 0; Metazoa - 2716; Fungi - 1263; Plants - 1493; Viruses - 17; Other Eukaryotes - 916 (source: NCBI BLink). & (gnl|cdd|36113 : 368.0) no description available & (gnl|cdd|29157 : 124.0) no description available & (reliability: 1608.0) & (original description: Putative UBC24, Description = Probable ubiquitin-conjugating enzyme E2 24, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf04988_164151-171103' '(gnl|cdd|35637 : 281.0) no description available & (at1g63800 : 271.0) ubiquitin-conjugating enzyme 5 (UBC5); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), Ubiquitin-conjugating enzyme (InterPro:IPR015581); BEST Arabidopsis thaliana protein match is: ubiquitin conjugating enzyme 4 (TAIR:AT5G41340.1); Has 8752 Blast hits to 8751 proteins in 386 species: Archae - 0; Bacteria - 0; Metazoa - 4011; Fungi - 1743; Plants - 1591; Viruses - 20; Other Eukaryotes - 1387 (source: NCBI BLink). & (p16577|ubc4_wheat : 270.0) Ubiquitin-conjugating enzyme E2-23 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (gnl|cdd|84587 : 147.0) no description available & (reliability: 542.0) & (original description: Putative 15454, Description = Predicted protein, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf04989_126096-137889' '(at1g53025 : 355.0) Ubiquitin-conjugating enzyme family protein; FUNCTIONS IN: small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 25 (TAIR:AT3G15355.1). & (gnl|cdd|36113 : 320.0) no description available & (gnl|cdd|29157 : 115.0) no description available & (reliability: 680.0) & (original description: Putative UBC38, Description = Putative ubiquitin-conjugating enzyme E2 38, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf05118_859016-866802' '(gnl|cdd|35637 : 278.0) no description available & (at1g63800 : 276.0) ubiquitin-conjugating enzyme 5 (UBC5); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), Ubiquitin-conjugating enzyme (InterPro:IPR015581); BEST Arabidopsis thaliana protein match is: ubiquitin conjugating enzyme 4 (TAIR:AT5G41340.1); Has 8752 Blast hits to 8751 proteins in 386 species: Archae - 0; Bacteria - 0; Metazoa - 4011; Fungi - 1743; Plants - 1591; Viruses - 20; Other Eukaryotes - 1387 (source: NCBI BLink). & (p16577|ubc4_wheat : 273.0) Ubiquitin-conjugating enzyme E2-23 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (gnl|cdd|84587 : 146.0) no description available & (reliability: 552.0) & (original description: Putative UBC5, Description = Ubiquitin-conjugating enzyme E2 5, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf05166_182991-196174' '(at2g02760 : 298.0) ubiquitin conjugating enzyme UBC2. Homolog of the yeast RAD6 gene.; ubiquiting-conjugating enzyme 2 (UBC2); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin carrier protein 1 (TAIR:AT1G14400.2); Has 10642 Blast hits to 10588 proteins in 402 species: Archae - 0; Bacteria - 2; Metazoa - 4556; Fungi - 2331; Plants - 2015; Viruses - 26; Other Eukaryotes - 1712 (source: NCBI BLink). & (p35130|ubc2_medsa : 298.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (gnl|cdd|35640 : 279.0) no description available & (gnl|cdd|34682 : 203.0) no description available & (reliability: 596.0) & (original description: Putative UBC2, Description = Ubiquitin-conjugating enzyme E2 2, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf05206_541944-549898' '(gnl|cdd|35646 : 292.0) no description available & (at5g59300 : 256.0) ubiquitin conjugating enzyme E2; ubiquitin carrier protein 7 (UBC7); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 13 (TAIR:AT3G46460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p25868|ubc7_wheat : 219.0) Ubiquitin-conjugating enzyme E2 7 (EC 6.3.2.19) (Ubiquitin-protein ligase 7) (Ubiquitin carrier protein 7) - Triticum aestivum (Wheat) & (gnl|cdd|84587 : 187.0) no description available & (reliability: 512.0) & (original description: Putative UBC14, Description = Ubiquitin-conjugating enzyme E2 14, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf05584_233397-239583' '(at4g27960 : 291.0) ubiquitin conjugating enzyme; ubiquitin conjugating enzyme 9 (UBC9); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 10 (TAIR:AT5G53300.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35638 : 262.0) no description available & (gnl|cdd|34682 : 214.0) no description available & (p25866|ubc2_wheat : 140.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (reliability: 582.0) & (original description: Putative UBC8, Description = Ubiquitin-conjugating enzyme E2 8, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf06412_583544-589154' '(gnl|cdd|36113 : 179.0) no description available & (at2g16920 : 157.0) ubiquitin-conjugating enzyme 23 (UBC23); FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: phosphate 2 (TAIR:AT2G33770.1); Has 13499 Blast hits to 9775 proteins in 506 species: Archae - 15; Bacteria - 1590; Metazoa - 4947; Fungi - 2194; Plants - 1786; Viruses - 166; Other Eukaryotes - 2801 (source: NCBI BLink). & (gnl|cdd|29157 : 88.0) no description available & (reliability: 300.0) & (original description: Putative Os01g0233900, Description = Os01g0233900 protein, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf06668_124-5346' '(at4g27960 : 289.0) ubiquitin conjugating enzyme; ubiquitin conjugating enzyme 9 (UBC9); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 10 (TAIR:AT5G53300.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35638 : 258.0) no description available & (gnl|cdd|34682 : 210.0) no description available & (p25866|ubc2_wheat : 138.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (reliability: 578.0) & (original description: Putative UBC, Description = Ubiquitin conjugating enzyme, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf07327_279542-285150' '(p16577|ubc4_wheat : 280.0) Ubiquitin-conjugating enzyme E2-23 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (at1g63800 : 279.0) ubiquitin-conjugating enzyme 5 (UBC5); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), Ubiquitin-conjugating enzyme (InterPro:IPR015581); BEST Arabidopsis thaliana protein match is: ubiquitin conjugating enzyme 4 (TAIR:AT5G41340.1); Has 8752 Blast hits to 8751 proteins in 386 species: Archae - 0; Bacteria - 0; Metazoa - 4011; Fungi - 1743; Plants - 1591; Viruses - 20; Other Eukaryotes - 1387 (source: NCBI BLink). & (gnl|cdd|35637 : 277.0) no description available & (gnl|cdd|84587 : 144.0) no description available & (reliability: 558.0) & (original description: Putative UBC5, Description = Ubiquitin-conjugating enzyme E2 5, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf08368_511165-527455' '(at1g70650 : 245.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding, small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: mitochondrion, intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: MMS ZWEI homologue 2 (TAIR:AT1G70660.1). & (gnl|cdd|36114 : 201.0) no description available & (gnl|cdd|34682 : 91.9) no description available & (reliability: 486.0) & (original description: Putative spm2, Description = Ubiquitin-conjugating enzyme E2 variant 2, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf08446_331693-339497' '(at2g33770 : 805.0) Encodes a ubiquitin-conjugating E2 enzyme. UBC24 mRNA accumulation is suppressed by miR399f, miR399b and miR399c. Involved in phosphate starvation response.; phosphate 2 (PHO2); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 23 (TAIR:AT2G16920.1); Has 6405 Blast hits to 6302 proteins in 368 species: Archae - 0; Bacteria - 0; Metazoa - 2716; Fungi - 1263; Plants - 1493; Viruses - 17; Other Eukaryotes - 916 (source: NCBI BLink). & (gnl|cdd|36113 : 376.0) no description available & (gnl|cdd|29157 : 123.0) no description available & (reliability: 1610.0) & (original description: Putative UBC24, Description = Probable ubiquitin-conjugating enzyme E2 24, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf09492_101974-104471' '(gnl|cdd|35646 : 277.0) no description available & (at5g59300 : 234.0) ubiquitin conjugating enzyme E2; ubiquitin carrier protein 7 (UBC7); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 13 (TAIR:AT3G46460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p25868|ubc7_wheat : 206.0) Ubiquitin-conjugating enzyme E2 7 (EC 6.3.2.19) (Ubiquitin-protein ligase 7) (Ubiquitin carrier protein 7) - Triticum aestivum (Wheat) & (gnl|cdd|34682 : 182.0) no description available & (reliability: 468.0) & (original description: Putative UBC13, Description = Ubiquitin-conjugating enzyme E2 13, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf10095_246527-251942' '(at4g27960 : 283.0) ubiquitin conjugating enzyme; ubiquitin conjugating enzyme 9 (UBC9); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 10 (TAIR:AT5G53300.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35638 : 262.0) no description available & (gnl|cdd|34682 : 211.0) no description available & (p25866|ubc2_wheat : 138.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (reliability: 566.0) & (original description: Putative UBC30, Description = Ubiquitin-conjugating enzyme E2 30, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf10299_19569-25571' '(at3g52560 : 280.0) ubiquitin E2 variant 1D-4 (UEV1D-4); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: MMS ZWEI homologue 3 (TAIR:AT2G36060.2). & (gnl|cdd|36114 : 230.0) no description available & (gnl|cdd|34682 : 86.9) no description available & (reliability: 560.0) & (original description: Putative UEV1D, Description = Ubiquitin-conjugating enzyme E2 variant 1D, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf10920_222400-233247' '(at3g58460 : 465.0) RHOMBOID-like protein 15 (RBL15); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 14 (TAIR:AT3G17611.1). & (gnl|cdd|37843 : 188.0) no description available & (gnl|cdd|85618 : 83.7) no description available & (reliability: 930.0) & (original description: Putative RBL15, Description = Rhomboid-like protein 15, PFAM = PF00627;PF01694)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf11738_46061-52845' '(gnl|cdd|35637 : 280.0) no description available & (at1g63800 : 271.0) ubiquitin-conjugating enzyme 5 (UBC5); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), Ubiquitin-conjugating enzyme (InterPro:IPR015581); BEST Arabidopsis thaliana protein match is: ubiquitin conjugating enzyme 4 (TAIR:AT5G41340.1); Has 8752 Blast hits to 8751 proteins in 386 species: Archae - 0; Bacteria - 0; Metazoa - 4011; Fungi - 1743; Plants - 1591; Viruses - 20; Other Eukaryotes - 1387 (source: NCBI BLink). & (p16577|ubc4_wheat : 269.0) Ubiquitin-conjugating enzyme E2-23 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (gnl|cdd|84587 : 147.0) no description available & (reliability: 542.0) & (original description: Putative 15454, Description = Predicted protein, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf12320_297768-301375' '(at3g20060 : 278.0) Encodes one of two ubiquitin-conjugating enzymes belonging to the E2-C gene family (the other being UBC19). Transcript is always found in dividing cells, but also in other non-dividing cells. Protein is localized to the cytoplasm as well as to the nucleus.; ubiquitin-conjugating enzyme19 (UBC19); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme E2 H10 (InterPro:IPR015582), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 20 (TAIR:AT1G50490.1); Has 9466 Blast hits to 9449 proteins in 390 species: Archae - 0; Bacteria - 0; Metazoa - 4186; Fungi - 1966; Plants - 1712; Viruses - 20; Other Eukaryotes - 1582 (source: NCBI BLink). & (gnl|cdd|35642 : 268.0) no description available & (gnl|cdd|84587 : 183.0) no description available & (p35130|ubc2_medsa : 127.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (reliability: 556.0) & (original description: Putative UBC19, Description = Ubiquitin-conjugating enzyme E2 19, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf12932_113000-121499' '(at4g27960 : 291.0) ubiquitin conjugating enzyme; ubiquitin conjugating enzyme 9 (UBC9); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 10 (TAIR:AT5G53300.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35638 : 258.0) no description available & (gnl|cdd|34682 : 210.0) no description available & (p25866|ubc2_wheat : 139.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (reliability: 582.0) & (original description: Putative UBC10, Description = Ubiquitin-conjugating enzyme E2 10, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf13710_356969-363258' '(at4g36800 : 273.0) RUB1 conjugating enzyme that conjugates CUL1 and is involved in auxin response and embryogenesis. RCE1 protein physically interacts with RBX1, which may be the E3 for CUL1.; RUB1 conjugating enzyme 1 (RCE1); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), RUB1 conjugating enzyme Ubc12 (InterPro:IPR015580); BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein (TAIR:AT2G18600.1); Has 8473 Blast hits to 8470 proteins in 386 species: Archae - 0; Bacteria - 0; Metazoa - 3871; Fungi - 1731; Plants - 1533; Viruses - 20; Other Eukaryotes - 1318 (source: NCBI BLink). & (gnl|cdd|35641 : 243.0) no description available & (gnl|cdd|34682 : 130.0) no description available & (reliability: 546.0) & (original description: Putative RCE1, Description = NEDD8-conjugating enzyme Ubc12, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf16833_8088-12468' '(at5g05080 : 338.0) ubiquitin-conjugating enzyme 22 (UBC22); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquiting-conjugating enzyme 2 (TAIR:AT2G02760.1); Has 9428 Blast hits to 9407 proteins in 388 species: Archae - 0; Bacteria - 0; Metazoa - 4145; Fungi - 1971; Plants - 1789; Viruses - 23; Other Eukaryotes - 1500 (source: NCBI BLink). & (gnl|cdd|35644 : 291.0) no description available & (gnl|cdd|29157 : 159.0) no description available & (p25866|ubc2_wheat : 107.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (reliability: 676.0) & (original description: Putative UBC22, Description = Ubiquitin-conjugating enzyme E2 22, PFAM = PF00179)' T '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'niben101scf30946_2039-10386' '(at2g36060 : 240.0) MMZ3/UEV1C encodes a protein that may play a role in DNA damage responses and error-free post-replicative DNA repair by participating in lysine-63-based polyubiquitination reactions. UEV1C can form diubiquitin and triubiquitin chains in combination with UBC13A/UBC35 in vitro. It can also functionally complement an mms2 mutation in budding yeast, both by increasing mms2 mutant viability in the presence of the DNA damaging agent MMS, and by reducing the rate of spontaneous DNA mutation. It can also rescue an mms2 ubc13 double mutant in yeast in combination with UBC13A. MMZ3/UEV1C transcripts are found at moderate levels in most plant organs, but cannot be detected in the pollen or 2 days after germination. Transcript levels do not appear to be stress-inducible.; MMS ZWEI homologue 3 (MMZ3); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin E2 variant 1D-4 (TAIR:AT3G52560.1); Has 2913 Blast hits to 2913 proteins in 284 species: Archae - 0; Bacteria - 0; Metazoa - 1555; Fungi - 342; Plants - 599; Viruses - 0; Other Eukaryotes - 417 (source: NCBI BLink). & (gnl|cdd|36114 : 229.0) no description available & (gnl|cdd|34682 : 85.3) no description available & (reliability: 480.0) & (original description: Putative UEV1D, Description = Ubiquitin-conjugating enzyme E2 variant 1D, PFAM = PF00179)' T '29.5.11.4' 'protein.degradation.ubiquitin.E3' '' '' '29.5.11.4.1' 'protein.degradation.ubiquitin.E3.HECT' 'nbv0.3scaffold21097_5153-20536' '(at4g12570 : 813.0) Knock-out mutants showed accelerated senescence of leaves.; ubiquitin protein ligase 5 (UPL5); CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 1 (TAIR:AT1G55860.1); Has 13201 Blast hits to 8328 proteins in 676 species: Archae - 0; Bacteria - 15; Metazoa - 6234; Fungi - 1825; Plants - 2664; Viruses - 167; Other Eukaryotes - 2296 (source: NCBI BLink). & (gnl|cdd|28959 : 337.0) no description available & (gnl|cdd|36157 : 263.0) no description available & (reliability: 1626.0) & (original description: Putative UPL5, Description = E3 ubiquitin-protein ligase UPL5, PFAM = PF00240;PF00632)' T '29.5.11.4.1' 'protein.degradation.ubiquitin.E3.HECT' 'nbv0.3scaffold35133_1-3372' '(at4g38600 : 511.0) encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content.; KAKTUS (KAK); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: trichome branching, DNA endoreduplication; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 4 (TAIR:AT5G02880.1); Has 6273 Blast hits to 5534 proteins in 324 species: Archae - 2; Bacteria - 240; Metazoa - 3391; Fungi - 909; Plants - 600; Viruses - 3; Other Eukaryotes - 1128 (source: NCBI BLink). & (gnl|cdd|35389 : 446.0) no description available & (reliability: 1022.0) & (original description: Putative KAK, Description = E3 ubiquitin-protein ligase UPL3, PFAM = )' T '29.5.11.4.1' 'protein.degradation.ubiquitin.E3.HECT' 'nbv0.3scaffold86989_292-5921' '(at4g38600 : 1109.0) encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content.; KAKTUS (KAK); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: trichome branching, DNA endoreduplication; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 4 (TAIR:AT5G02880.1); Has 6273 Blast hits to 5534 proteins in 324 species: Archae - 2; Bacteria - 240; Metazoa - 3391; Fungi - 909; Plants - 600; Viruses - 3; Other Eukaryotes - 1128 (source: NCBI BLink). & (gnl|cdd|35389 : 734.0) no description available & (reliability: 2218.0) & (original description: Putative KAK, Description = E3 ubiquitin-protein ligase UPL3, PFAM = )' T '29.5.11.4.1' 'protein.degradation.ubiquitin.E3.HECT' 'nbv0.3scaffold121235_228-2103' '(at3g17205 : 207.0) ubiquitin protein ligase 6 (UPL6); CONTAINS InterPro DOMAIN/s: HECT (InterPro:IPR000569), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 7 (TAIR:AT3G53090.2). & (gnl|cdd|36160 : 162.0) no description available & (reliability: 414.0) & (original description: Putative UPL6, Description = E3 ubiquitin-protein ligase UPL6, PFAM = )' T '29.5.11.4.1' 'protein.degradation.ubiquitin.E3.HECT' 'nbv0.5scaffold48_477287-492445' '(at4g38600 : 2053.0) encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content.; KAKTUS (KAK); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: trichome branching, DNA endoreduplication; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 4 (TAIR:AT5G02880.1); Has 6273 Blast hits to 5534 proteins in 324 species: Archae - 2; Bacteria - 240; Metazoa - 3391; Fungi - 909; Plants - 600; Viruses - 3; Other Eukaryotes - 1128 (source: NCBI BLink). & (gnl|cdd|35391 : 773.0) no description available & (gnl|cdd|28959 : 337.0) no description available & (reliability: 4106.0) & (original description: Putative KAK, Description = E3 ubiquitin-protein ligase UPL3, PFAM = PF00632)' T '29.5.11.4.1' 'protein.degradation.ubiquitin.E3.HECT' 'nbv0.5scaffold277_680434-761277' '(at3g17205 : 1420.0) ubiquitin protein ligase 6 (UPL6); CONTAINS InterPro DOMAIN/s: HECT (InterPro:IPR000569), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 7 (TAIR:AT3G53090.2). & (gnl|cdd|36160 : 804.0) no description available & (gnl|cdd|28959 : 413.0) no description available & (reliability: 2840.0) & (original description: Putative UPL6, Description = E3 ubiquitin-protein ligase UPL6, PFAM = PF00632)' T '29.5.11.4.1' 'protein.degradation.ubiquitin.E3.HECT' 'nbv0.5scaffold1920_365970-384577' '(at4g38600 : 2174.0) encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content.; KAKTUS (KAK); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: trichome branching, DNA endoreduplication; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 4 (TAIR:AT5G02880.1); Has 6273 Blast hits to 5534 proteins in 324 species: Archae - 2; Bacteria - 240; Metazoa - 3391; Fungi - 909; Plants - 600; Viruses - 3; Other Eukaryotes - 1128 (source: NCBI BLink). & (gnl|cdd|35389 : 840.0) no description available & (gnl|cdd|28959 : 336.0) no description available & (reliability: 4348.0) & (original description: Putative UPL3, Description = E3 ubiquitin-protein ligase UPL3, PFAM = PF00632)' T '29.5.11.4.1' 'protein.degradation.ubiquitin.E3.HECT' 'nbv0.5scaffold4892_148852-170546' '(at3g53090 : 1318.0) encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis.; ubiquitin-protein ligase 7 (UPL7); CONTAINS InterPro DOMAIN/s: HECT (InterPro:IPR000569), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: ubiquitin protein ligase 6 (TAIR:AT3G17205.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39628 : 924.0) no description available & (gnl|cdd|28959 : 395.0) no description available & (reliability: 2636.0) & (original description: Putative UPL7, Description = E3 ubiquitin-protein ligase UPL7, PFAM = PF00632)' T '29.5.11.4.1' 'protein.degradation.ubiquitin.E3.HECT' 'niben044scf00002172ctg000_167-17942' '(at1g70320 : 1100.0) encodes a ubiquitin-protein ligase-like protein containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis.; ubiquitin-protein ligase 2 (UPL2); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: cytosol, mitochondrion, ubiquitin ligase complex, nucleus; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), E3 ubiquitin ligase, domain of unknown function DUF913 (InterPro:IPR010314), HECT (InterPro:IPR000569), Armadillo-type fold (InterPro:IPR016024), Ubiquitin interacting motif (InterPro:IPR003903), E3 ubiquitin ligase, domain of unknown function DUF908 (InterPro:IPR010309), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 1 (TAIR:AT1G55860.2); Has 34660 Blast hits to 19733 proteins in 1213 species: Archae - 286; Bacteria - 8191; Metazoa - 9374; Fungi - 5439; Plants - 1788; Viruses - 520; Other Eukaryotes - 9062 (source: NCBI BLink). & (gnl|cdd|36157 : 579.0) no description available & (gnl|cdd|28959 : 433.0) no description available & (reliability: 2200.0) & (original description: Putative sr14431, Description = Related to ubiquitin-protein ligase 1, PFAM = PF14377;PF06012;PF00627;PF00632;PF06025)' T '29.5.11.4.1' 'protein.degradation.ubiquitin.E3.HECT' 'niben044scf00004456ctg009_329-4370' '(at4g38600 : 710.0) encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content.; KAKTUS (KAK); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: trichome branching, DNA endoreduplication; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 4 (TAIR:AT5G02880.1); Has 6273 Blast hits to 5534 proteins in 324 species: Archae - 2; Bacteria - 240; Metazoa - 3391; Fungi - 909; Plants - 600; Viruses - 3; Other Eukaryotes - 1128 (source: NCBI BLink). & (gnl|cdd|35389 : 408.0) no description available & (reliability: 1420.0) & (original description: Putative KAK, Description = E3 ubiquitin-protein ligase UPL3, PFAM = )' T '29.5.11.4.1' 'protein.degradation.ubiquitin.E3.HECT' 'niben044scf00004456ctg010_1-1947' '(at4g38600 : 370.0) encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content.; KAKTUS (KAK); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: trichome branching, DNA endoreduplication; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 4 (TAIR:AT5G02880.1); Has 6273 Blast hits to 5534 proteins in 324 species: Archae - 2; Bacteria - 240; Metazoa - 3391; Fungi - 909; Plants - 600; Viruses - 3; Other Eukaryotes - 1128 (source: NCBI BLink). & (gnl|cdd|35389 : 290.0) no description available & (reliability: 740.0) & (original description: Putative KAK, Description = E3 ubiquitin-protein ligase UPL3, PFAM = )' T '29.5.11.4.1' 'protein.degradation.ubiquitin.E3.HECT' 'niben044scf00011970ctg015_1-6325' '(at4g12570 : 709.0) Knock-out mutants showed accelerated senescence of leaves.; ubiquitin protein ligase 5 (UPL5); CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 1 (TAIR:AT1G55860.1); Has 13201 Blast hits to 8328 proteins in 676 species: Archae - 0; Bacteria - 15; Metazoa - 6234; Fungi - 1825; Plants - 2664; Viruses - 167; Other Eukaryotes - 2296 (source: NCBI BLink). & (gnl|cdd|28959 : 316.0) no description available & (gnl|cdd|36157 : 228.0) no description available & (reliability: 1418.0) & (original description: Putative UPL5, Description = E3 ubiquitin-protein ligase UPL5, PFAM = PF00240;PF00632)' T '29.5.11.4.1' 'protein.degradation.ubiquitin.E3.HECT' 'niben044scf00014861ctg001_338-18719' '(at1g55860 : 3905.0) encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis.; ubiquitin-protein ligase 1 (UPL1); CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), E3 ubiquitin ligase, domain of unknown function DUF913 (InterPro:IPR010314), Ubiquitin interacting motif (InterPro:IPR003903), E3 ubiquitin ligase, domain of unknown function DUF908 (InterPro:IPR010309), HECT (InterPro:IPR000569), Armadillo-type fold (InterPro:IPR016024), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 2 (TAIR:AT1G70320.1). & (gnl|cdd|36157 : 603.0) no description available & (gnl|cdd|28959 : 435.0) no description available & (reliability: 7810.0) & (original description: Putative UPL1, Description = E3 ubiquitin-protein ligase UPL1, PFAM = PF06012;PF06012;PF00632;PF00627;PF06025;PF14377)' T '29.5.11.4.1' 'protein.degradation.ubiquitin.E3.HECT' 'niben044scf00028672ctg008_10974-13515' '(at4g38600 : 338.0) encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content.; KAKTUS (KAK); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: trichome branching, DNA endoreduplication; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 4 (TAIR:AT5G02880.1); Has 6273 Blast hits to 5534 proteins in 324 species: Archae - 2; Bacteria - 240; Metazoa - 3391; Fungi - 909; Plants - 600; Viruses - 3; Other Eukaryotes - 1128 (source: NCBI BLink). & (gnl|cdd|35389 : 265.0) no description available & (reliability: 676.0) & (original description: Putative KAK, Description = E3 ubiquitin-protein ligase UPL3, PFAM = )' T '29.5.11.4.1' 'protein.degradation.ubiquitin.E3.HECT' 'niben044scf00028672ctg009_1-4027' '(at4g38600 : 774.0) encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content.; KAKTUS (KAK); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: trichome branching, DNA endoreduplication; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 4 (TAIR:AT5G02880.1); Has 6273 Blast hits to 5534 proteins in 324 species: Archae - 2; Bacteria - 240; Metazoa - 3391; Fungi - 909; Plants - 600; Viruses - 3; Other Eukaryotes - 1128 (source: NCBI BLink). & (gnl|cdd|35389 : 456.0) no description available & (reliability: 1548.0) & (original description: Putative BnaC07g47680D, Description = BnaC07g47680D protein, PFAM = )' T '29.5.11.4.1' 'protein.degradation.ubiquitin.E3.HECT' 'niben044scf00048278ctg004_2212-5293' '(at3g53090 : 229.0) encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis.; ubiquitin-protein ligase 7 (UPL7); CONTAINS InterPro DOMAIN/s: HECT (InterPro:IPR000569), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: ubiquitin protein ligase 6 (TAIR:AT3G17205.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39628 : 195.0) no description available & (gnl|cdd|84914 : 153.0) no description available & (reliability: 458.0) & (original description: Putative ube3b, Description = Ubiquitin-protein ligase E3C, PFAM = PF00632)' T '29.5.11.4.1' 'protein.degradation.ubiquitin.E3.HECT' 'niben101scf00682_371713-394964' '(at3g53090 : 1312.0) encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis.; ubiquitin-protein ligase 7 (UPL7); CONTAINS InterPro DOMAIN/s: HECT (InterPro:IPR000569), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: ubiquitin protein ligase 6 (TAIR:AT3G17205.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39628 : 928.0) no description available & (gnl|cdd|28959 : 398.0) no description available & (reliability: 2624.0) & (original description: Putative UPL7, Description = E3 ubiquitin-protein ligase UPL7, PFAM = PF00632)' T '29.5.11.4.1' 'protein.degradation.ubiquitin.E3.HECT' 'niben101scf02133_1062911-1081578' '(at1g55860 : 3908.0) encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis.; ubiquitin-protein ligase 1 (UPL1); CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), E3 ubiquitin ligase, domain of unknown function DUF913 (InterPro:IPR010314), Ubiquitin interacting motif (InterPro:IPR003903), E3 ubiquitin ligase, domain of unknown function DUF908 (InterPro:IPR010309), HECT (InterPro:IPR000569), Armadillo-type fold (InterPro:IPR016024), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 2 (TAIR:AT1G70320.1). & (gnl|cdd|36157 : 602.0) no description available & (gnl|cdd|28959 : 430.0) no description available & (reliability: 7816.0) & (original description: Putative UPL1, Description = E3 ubiquitin-protein ligase UPL1, PFAM = PF14377;PF06012;PF06025;PF00627;PF00632)' T '29.5.11.4.1' 'protein.degradation.ubiquitin.E3.HECT' 'niben101scf02658_320862-342690' '(at4g38600 : 2063.0) encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content.; KAKTUS (KAK); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: trichome branching, DNA endoreduplication; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 4 (TAIR:AT5G02880.1); Has 6273 Blast hits to 5534 proteins in 324 species: Archae - 2; Bacteria - 240; Metazoa - 3391; Fungi - 909; Plants - 600; Viruses - 3; Other Eukaryotes - 1128 (source: NCBI BLink). & (gnl|cdd|35391 : 771.0) no description available & (gnl|cdd|28959 : 338.0) no description available & (reliability: 4126.0) & (original description: Putative UPL3, Description = E3 ubiquitin-protein ligase UPL3, PFAM = PF00632)' T '29.5.11.4.1' 'protein.degradation.ubiquitin.E3.HECT' 'niben101scf02740_396299-403996' '(at4g12570 : 660.0) Knock-out mutants showed accelerated senescence of leaves.; ubiquitin protein ligase 5 (UPL5); CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 1 (TAIR:AT1G55860.1); Has 13201 Blast hits to 8328 proteins in 676 species: Archae - 0; Bacteria - 15; Metazoa - 6234; Fungi - 1825; Plants - 2664; Viruses - 167; Other Eukaryotes - 2296 (source: NCBI BLink). & (gnl|cdd|28959 : 328.0) no description available & (gnl|cdd|36157 : 258.0) no description available & (reliability: 1320.0) & (original description: Putative UPL5, Description = E3 ubiquitin-protein ligase UPL5, PFAM = PF00240;PF00632)' T '29.5.11.4.1' 'protein.degradation.ubiquitin.E3.HECT' 'niben101scf02911_447366-457370' '(at4g12570 : 834.0) Knock-out mutants showed accelerated senescence of leaves.; ubiquitin protein ligase 5 (UPL5); CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 1 (TAIR:AT1G55860.1); Has 13201 Blast hits to 8328 proteins in 676 species: Archae - 0; Bacteria - 15; Metazoa - 6234; Fungi - 1825; Plants - 2664; Viruses - 167; Other Eukaryotes - 2296 (source: NCBI BLink). & (gnl|cdd|28959 : 338.0) no description available & (gnl|cdd|36157 : 263.0) no description available & (reliability: 1668.0) & (original description: Putative UPL5, Description = E3 ubiquitin-protein ligase UPL5, PFAM = PF00240;PF00632)' T '29.5.11.4.1' 'protein.degradation.ubiquitin.E3.HECT' 'niben101scf03141_493046-496094' '(at4g12570 : 170.0) Knock-out mutants showed accelerated senescence of leaves.; ubiquitin protein ligase 5 (UPL5); CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 1 (TAIR:AT1G55860.1); Has 13201 Blast hits to 8328 proteins in 676 species: Archae - 0; Bacteria - 15; Metazoa - 6234; Fungi - 1825; Plants - 2664; Viruses - 167; Other Eukaryotes - 2296 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative PGSC0003DMG400003284, Description = E3 ubiquitin-protein ligase UPL5, PFAM = PF00240)' T '29.5.11.4.1' 'protein.degradation.ubiquitin.E3.HECT' 'niben101scf03308_218605-225325' '(at4g12570 : 644.0) Knock-out mutants showed accelerated senescence of leaves.; ubiquitin protein ligase 5 (UPL5); CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 1 (TAIR:AT1G55860.1); Has 13201 Blast hits to 8328 proteins in 676 species: Archae - 0; Bacteria - 15; Metazoa - 6234; Fungi - 1825; Plants - 2664; Viruses - 167; Other Eukaryotes - 2296 (source: NCBI BLink). & (gnl|cdd|28959 : 270.0) no description available & (gnl|cdd|36157 : 183.0) no description available & (reliability: 1288.0) & (original description: Putative UPL5, Description = E3 ubiquitin-protein ligase UPL5, PFAM = PF00632;PF00632;PF00240)' T '29.5.11.4.1' 'protein.degradation.ubiquitin.E3.HECT' 'niben101scf04207_306-10647' '(at5g02880 : 1389.0) encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis.; ubiquitin-protein ligase 4 (UPL4); CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: HEAT repeat ;HECT-domain (ubiquitin-transferase) (TAIR:AT4G38600.1); Has 5635 Blast hits to 5003 proteins in 272 species: Archae - 0; Bacteria - 11; Metazoa - 3196; Fungi - 992; Plants - 513; Viruses - 0; Other Eukaryotes - 923 (source: NCBI BLink). & (gnl|cdd|35391 : 635.0) no description available & (gnl|cdd|28959 : 313.0) no description available & (reliability: 2778.0) & (original description: Putative UPL4, Description = E3 ubiquitin-protein ligase UPL4, PFAM = PF00632)' T '29.5.11.4.1' 'protein.degradation.ubiquitin.E3.HECT' 'niben101scf04752_23636-34082' '(at5g02880 : 1399.0) encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis.; ubiquitin-protein ligase 4 (UPL4); CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: HEAT repeat ;HECT-domain (ubiquitin-transferase) (TAIR:AT4G38600.1); Has 5635 Blast hits to 5003 proteins in 272 species: Archae - 0; Bacteria - 11; Metazoa - 3196; Fungi - 992; Plants - 513; Viruses - 0; Other Eukaryotes - 923 (source: NCBI BLink). & (gnl|cdd|35391 : 627.0) no description available & (gnl|cdd|28959 : 320.0) no description available & (reliability: 2798.0) & (original description: Putative KAK, Description = E3 ubiquitin-protein ligase UPL3, PFAM = PF00632)' T '29.5.11.4.1' 'protein.degradation.ubiquitin.E3.HECT' 'niben101scf07109_353756-379041' '(at4g38600 : 2170.0) encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content.; KAKTUS (KAK); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: trichome branching, DNA endoreduplication; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 4 (TAIR:AT5G02880.1); Has 6273 Blast hits to 5534 proteins in 324 species: Archae - 2; Bacteria - 240; Metazoa - 3391; Fungi - 909; Plants - 600; Viruses - 3; Other Eukaryotes - 1128 (source: NCBI BLink). & (gnl|cdd|35389 : 837.0) no description available & (gnl|cdd|28959 : 342.0) no description available & (reliability: 4340.0) & (original description: Putative UPL3, Description = E3 ubiquitin-protein ligase UPL3, PFAM = PF00632)' T '29.5.11.4.1' 'protein.degradation.ubiquitin.E3.HECT' 'niben101scf07109_354819-357449' '(at4g38600 : 141.0) encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content.; KAKTUS (KAK); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: trichome branching, DNA endoreduplication; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 4 (TAIR:AT5G02880.1); Has 6273 Blast hits to 5534 proteins in 324 species: Archae - 2; Bacteria - 240; Metazoa - 3391; Fungi - 909; Plants - 600; Viruses - 3; Other Eukaryotes - 1128 (source: NCBI BLink). & (gnl|cdd|35389 : 121.0) no description available & (reliability: 282.0) & (original description: Putative KAK, Description = E3 ubiquitin-protein ligase UPL3, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold103_100842-104062' '(at3g58030 : 249.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G42030.1). & (gnl|cdd|36041 : 146.0) no description available & (reliability: 498.0) & (original description: Putative RNF5, Description = Zinc finger, C3HC4 type (RING finger) protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold761_26848-38349' '(at3g19910 : 204.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G63530.2); Has 15086 Blast hits to 12507 proteins in 429 species: Archae - 8; Bacteria - 555; Metazoa - 4333; Fungi - 1497; Plants - 5032; Viruses - 175; Other Eukaryotes - 3486 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative Os08g0548300, Description = Os08g0548300 protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold1032_20403-23903' '(at4g35070 : 156.0) SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: S-ribonuclease binding protein 1 (TAIR:AT1G45976.1); Has 698 Blast hits to 689 proteins in 99 species: Archae - 0; Bacteria - 9; Metazoa - 204; Fungi - 4; Plants - 376; Viruses - 12; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|36316 : 113.0) no description available & (reliability: 312.0) & (original description: Putative At4g35070, Description = SBP (S-ribonuclease binding protein) family protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold1249_90733-95484' '(at4g03000 : 441.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G03365.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 882.0) & (original description: Putative PGSC0003DMG400003811, Description = BnaA09g01220D protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold1419_9967-12656' '(at5g58580 : 87.4) TOXICOS EN LEVADURA 63 (ATL63); FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: TOXICOS EN LEVADURA 2 (TAIR:AT3G16720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative RCOM_1090140, Description = RING-H2 finger protein ATL3F, putative, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold2030_1-6498' '(gnl|cdd|36570 : 183.0) no description available & (at1g11950 : 174.0) Transcription factor jumonji (jmjC) domain-containing protein; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G62310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative IBM1, Description = Lysine-specific demethylase 3B, PFAM = PF02373)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold2032_51572-54675' '(at1g72200 : 171.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G22500.1); Has 9343 Blast hits to 9316 proteins in 282 species: Archae - 0; Bacteria - 4; Metazoa - 2295; Fungi - 806; Plants - 4899; Viruses - 51; Other Eukaryotes - 1288 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative ATL34, Description = RING-H2 finger protein ATL1N, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold2219_13262-15774' '(at1g12760 : 120.0) Zinc finger, C3HC4 type (RING finger) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT1G63170.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative UBQ1, Description = Zinc finger, C3HC4 type (RING finger) protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold2319_76542-81742' '(at1g72200 : 159.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G22500.1); Has 9343 Blast hits to 9316 proteins in 282 species: Archae - 0; Bacteria - 4; Metazoa - 2295; Fungi - 806; Plants - 4899; Viruses - 51; Other Eukaryotes - 1288 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative ATL34, Description = E3 ubiquitin-protein ligase ATL6, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold3745_44039-47610' '(at5g62910 : 176.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G48070.2); Has 749 Blast hits to 665 proteins in 188 species: Archae - 0; Bacteria - 6; Metazoa - 241; Fungi - 216; Plants - 135; Viruses - 4; Other Eukaryotes - 147 (source: NCBI BLink). & (gnl|cdd|37279 : 138.0) no description available & (reliability: 352.0) & (original description: Putative BnaC03g51350D, Description = BnaC03g51350D protein, PFAM = PF14570)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold5248_42025-44546' '(at2g35910 : 137.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G06490.1); Has 8225 Blast hits to 8203 proteins in 288 species: Archae - 0; Bacteria - 0; Metazoa - 1997; Fungi - 507; Plants - 4688; Viruses - 66; Other Eukaryotes - 967 (source: NCBI BLink). & (gnl|cdd|39828 : 84.3) no description available & (reliability: 274.0) & (original description: Putative ATL71, Description = Putative RING-H2 finger protein ATL71, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold7089_6517-14037' '(at5g22000 : 292.0) encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. Double mutant analyses with RHF1a suggests that RHF2a may be involved in targetting ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF2a is expressed in all four floral whorls and is present at ~8-fold higher levels than RHF1a in inflorescences by RT-PCR analyses.; RING-H2 group F2A (RHF2A); FUNCTIONS IN: zinc ion binding; INVOLVED IN: regulation of cell cycle, proteolysis involved in cellular protein catabolic process, megagametogenesis, microgametogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 group F1A (TAIR:AT4G14220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 584.0) & (original description: Putative RHF2A, Description = E3 ubiquitin-protein ligase RHF2A, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold7210_27607-30453' '(at1g72220 : 128.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G33565.1); Has 9784 Blast hits to 9740 proteins in 308 species: Archae - 0; Bacteria - 7; Metazoa - 2351; Fungi - 909; Plants - 4998; Viruses - 86; Other Eukaryotes - 1433 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative ATL52, Description = RING-H2 finger protein ATL54, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold7618_161-8284' '(at3g62970 : 287.0) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: CHY-type/CTCHY-type/RING-type Zinc finger protein (TAIR:AT5G18650.1); Has 819 Blast hits to 814 proteins in 181 species: Archae - 0; Bacteria - 4; Metazoa - 266; Fungi - 146; Plants - 268; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|37151 : 184.0) no description available & (reliability: 574.0) & (original description: Putative MIEL1, Description = E3 ubiquitin-protein ligase MIEL1, PFAM = PF14599;PF05495;PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold8094_8292-18729' '(at5g22000 : 300.0) encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. Double mutant analyses with RHF1a suggests that RHF2a may be involved in targetting ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF2a is expressed in all four floral whorls and is present at ~8-fold higher levels than RHF1a in inflorescences by RT-PCR analyses.; RING-H2 group F2A (RHF2A); FUNCTIONS IN: zinc ion binding; INVOLVED IN: regulation of cell cycle, proteolysis involved in cellular protein catabolic process, megagametogenesis, microgametogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 group F1A (TAIR:AT4G14220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 600.0) & (original description: Putative RHF2A, Description = E3 ubiquitin-protein ligase RHF2A, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold8547_24909-32432' '(at3g06140 : 294.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G19080.1); Has 7743 Blast hits to 5478 proteins in 376 species: Archae - 2; Bacteria - 144; Metazoa - 2405; Fungi - 531; Plants - 3352; Viruses - 272; Other Eukaryotes - 1037 (source: NCBI BLink). & (gnl|cdd|39466 : 253.0) no description available & (reliability: 588.0) & (original description: Putative LUL2, Description = Probable E3 ubiquitin-protein ligase LUL2, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold8859_41801-44745' '(at5g40250 : 295.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G23980.1); Has 9426 Blast hits to 9402 proteins in 296 species: Archae - 0; Bacteria - 0; Metazoa - 2235; Fungi - 712; Plants - 5071; Viruses - 76; Other Eukaryotes - 1332 (source: NCBI BLink). & (reliability: 590.0) & (original description: Putative ATL46, Description = RING-H2 finger protein ATL46, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold9160_44590-50051' '(at4g33940 : 173.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box protein with domain of unknown function (DUF 1232) (TAIR:AT1G72175.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37375 : 87.4) no description available & (reliability: 346.0) & (original description: Putative BnaA03g50750D, Description = BnaA03g50750D protein, PFAM = PF13445)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold10031_22216-26920' '(at5g42940 : 97.8) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G45180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative , Description = RING finger protein 165, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold10773_16992-23335' '(at1g71980 : 420.0) Protease-associated (PA) RING/U-box zinc finger family protein; FUNCTIONS IN: peptidase activity, zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: Protease-associated (PA) RING/U-box zinc finger family protein (TAIR:AT1G22670.1); Has 15658 Blast hits to 9675 proteins in 411 species: Archae - 0; Bacteria - 271; Metazoa - 3014; Fungi - 1211; Plants - 4865; Viruses - 29; Other Eukaryotes - 6268 (source: NCBI BLink). & (gnl|cdd|39828 : 299.0) no description available & (gnl|cdd|80345 : 148.0) no description available & (reliability: 840.0) & (original description: Putative RMR2, Description = Receptor homology region, transmembrane domain- and RING domain-containing protein 2, PFAM = PF02225;PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold11162_24985-28086' '(at1g68180 : 149.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G56580.3); Has 9058 Blast hits to 9033 proteins in 265 species: Archae - 0; Bacteria - 0; Metazoa - 2534; Fungi - 573; Plants - 4692; Viruses - 31; Other Eukaryotes - 1228 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative csu180, Description = E3 ubiquitin-protein ligase RING1-like protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold11247_30672-33850' '(at4g28890 : 294.0) RING/U-box superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: root stele, root endodermis, hypocotyl, root, primary root differentiation zone; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G20030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 588.0) & (original description: Putative ATL12, Description = E3 ubiquitin-protein ligase ATL42, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold12259_618-7745' '(at2g22120 : 220.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G11020.1). & (reliability: 440.0) & (original description: Putative ZNF2, Description = Putative E3 ubiquitin-protein ligase MARCH8-like, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold13242_4903-15067' '(at3g07370 : 384.0) Encodes AtCHIP, a new class of E3 ubiquitin ligases with three tetratricopeptide repeats and a U-box domain, structurally similar to the animal CHIP proteins. Plays an important role in plant cellular metabolism under temperature stress conditions. Functions as an E3 ubiquitin ligase of protein phosphatase 2A subunits and alters plant response to abscisic acid treatment.; carboxyl terminus of HSC70-interacting protein (CHIP); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: response to salt stress, response to temperature stimulus, response to abscisic acid stimulus, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), U box domain (InterPro:IPR003613), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: protein phosphatase 5.2 (TAIR:AT2G42810.2); Has 6721 Blast hits to 5903 proteins in 442 species: Archae - 38; Bacteria - 482; Metazoa - 2236; Fungi - 1004; Plants - 1936; Viruses - 0; Other Eukaryotes - 1025 (source: NCBI BLink). & (gnl|cdd|39841 : 272.0) no description available & (gnl|cdd|86687 : 103.0) no description available & (reliability: 768.0) & (original description: Putative CHIP, Description = E3 ubiquitin-protein ligase CHIP, PFAM = PF13181;PF04564;PF12895)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold13792_32571-37922' '(at5g15820 : 126.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G02340.1); Has 8420 Blast hits to 8405 proteins in 260 species: Archae - 0; Bacteria - 6; Metazoa - 2461; Fungi - 626; Plants - 4186; Viruses - 29; Other Eukaryotes - 1112 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative At3g02340, Description = Zinc finger, RING/FYVE/PHD-type, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold13810_21516-24427' '(at1g53820 : 136.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G72310.1); Has 9301 Blast hits to 9282 proteins in 297 species: Archae - 0; Bacteria - 0; Metazoa - 2391; Fungi - 736; Plants - 4843; Viruses - 80; Other Eukaryotes - 1251 (source: NCBI BLink). & (q9lrb7|el5_orysa : 87.0) E3 ubiquitin-protein ligase EL5 (EC 6.3.2.-) - Oryza sativa (Rice) & (reliability: 272.0) & (original description: Putative ACRE132, Description = Avr9/Cf-9 rapidly elicited protein 132, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold14784_7985-11235' '(at3g18930 : 206.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G03550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative ATL65, Description = RING-H2 finger protein ATL65, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold17086_13364-28813' '(at5g01960 : 498.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G65040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39838 : 154.0) no description available & (reliability: 996.0) & (original description: Putative RNF1, Description = RING finger protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold17726_8538-12837' '(at5g54630 : 129.0) zinc finger protein-related; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT4G27240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative mrpi1, Description = C2H2-like zinc finger protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold18293_18660-32965' '(at3g06330 : 354.0) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G18760.1); Has 1679 Blast hits to 1519 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 662; Fungi - 124; Plants - 642; Viruses - 4; Other Eukaryotes - 247 (source: NCBI BLink). & (gnl|cdd|36822 : 110.0) no description available & (reliability: 708.0) & (original description: Putative RZFP5, Description = C3HC4 type zinc finger protein, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold18465_4920-13659' '(at5g01960 : 504.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G65040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39838 : 152.0) no description available & (reliability: 1008.0) & (original description: Putative Os01g0168400, Description = Os01g0168400 protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold19848_6539-11814' '(at1g20780 : 155.0) Encodes a protein containing a U-box and an ARM domain.; senescence-associated E3 ubiquitin ligase 1 (SAUL1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of chlorophyll catabolic process, regulation of chlorophyll biosynthetic process, leaf senescence, regulation of abscisic acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G76390.2); Has 2790 Blast hits to 2660 proteins in 201 species: Archae - 0; Bacteria - 20; Metazoa - 434; Fungi - 161; Plants - 1969; Viruses - 3; Other Eukaryotes - 203 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative Sb03g045700, Description = Putative uncharacterized protein Sb03g045700, PFAM = PF05804)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold20240_16378-22147' '(at1g32360 : 337.0) Zinc finger (CCCH-type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT2G35430.1); Has 13421 Blast hits to 5509 proteins in 634 species: Archae - 13; Bacteria - 2784; Metazoa - 4906; Fungi - 574; Plants - 3348; Viruses - 263; Other Eukaryotes - 1533 (source: NCBI BLink). & (reliability: 674.0) & (original description: Putative At1g32360, Description = Zinc finger CCCH domain-containing protein 12, PFAM = PF00642;PF00642)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold20396_14570-17613' '(at1g32740 : 98.2) SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: SBP (S-ribonuclease binding protein) family protein (TAIR:AT4G17680.1); Has 798 Blast hits to 798 proteins in 121 species: Archae - 0; Bacteria - 4; Metazoa - 316; Fungi - 15; Plants - 388; Viruses - 21; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|36316 : 92.8) no description available & (reliability: 196.4) & (original description: Putative , Description = , PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold20557_1515-4675' '(at4g28890 : 279.0) RING/U-box superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: root stele, root endodermis, hypocotyl, root, primary root differentiation zone; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G20030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 558.0) & (original description: Putative ATL12, Description = Putative RING-H2 finger protein ATL12, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold20804_4804-22406' '(at2g30580 : 401.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 2 (DRIP2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 1 (TAIR:AT1G06770.1); Has 1631 Blast hits to 1626 proteins in 163 species: Archae - 0; Bacteria - 2; Metazoa - 1227; Fungi - 58; Plants - 232; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|37871 : 129.0) no description available & (reliability: 802.0) & (original description: Putative DRIP2, Description = E3 ubiquitin protein ligase DRIP2, PFAM = PF13923)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold20974_21202-27493' '(at5g05830 : 180.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G01070.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative At5g05830, Description = At5g05830, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold21585_24250-27702' '(at5g62910 : 168.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G48070.2); Has 749 Blast hits to 665 proteins in 188 species: Archae - 0; Bacteria - 6; Metazoa - 241; Fungi - 216; Plants - 135; Viruses - 4; Other Eukaryotes - 147 (source: NCBI BLink). & (gnl|cdd|37279 : 140.0) no description available & (reliability: 336.0) & (original description: Putative BnaA06g16910D, Description = BnaA06g16910D protein, PFAM = PF14570)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold23431_5247-10366' '(at5g05830 : 135.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G01070.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative PGSC0003DMG400020824, Description = Zinc finger, RING-CH-type, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold24599_5388-29328' '(at4g00990 : 620.0) Transcription factor jumonji (jmjC) domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, RING-type (InterPro:IPR001841), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G11950.1); Has 966 Blast hits to 671 proteins in 113 species: Archae - 0; Bacteria - 8; Metazoa - 538; Fungi - 54; Plants - 301; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36570 : 355.0) no description available & (reliability: 1240.0) & (original description: Putative Sb01g015210, Description = Putative uncharacterized protein Sb01g015210, PFAM = PF02373)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold25912_22411-28169' '(at5g48655 : 143.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G07200.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative At5g48655, Description = Putative RING zinc finger, PFAM = PF13923)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold29281_1-4345' '(at1g73760 : 144.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G17970.1); Has 8524 Blast hits to 8508 proteins in 269 species: Archae - 0; Bacteria - 6; Metazoa - 2401; Fungi - 632; Plants - 4276; Viruses - 14; Other Eukaryotes - 1195 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative PGSC0003DMG400030571, Description = E3 ubiquitin ligase BIG BROTHER-related protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold29879_10904-13890' '(at5g40250 : 283.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G23980.1); Has 9426 Blast hits to 9402 proteins in 296 species: Archae - 0; Bacteria - 0; Metazoa - 2235; Fungi - 712; Plants - 5071; Viruses - 76; Other Eukaryotes - 1332 (source: NCBI BLink). & (reliability: 566.0) & (original description: Putative BnaC06g12870D, Description = BnaC06g12870D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold30064_11586-14779' '(at3g19950 : 230.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G55530.1); Has 11106 Blast hits to 11075 proteins in 297 species: Archae - 0; Bacteria - 6; Metazoa - 2940; Fungi - 1152; Plants - 5266; Viruses - 73; Other Eukaryotes - 1669 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative At3g19950, Description = E3 ubiquitin-protein ligase RING1-like, PFAM = PF13639;PF14369)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold30217_20004-23098' '(at5g59550 : 244.0) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Protein of unknown function DUF1117 (InterPro:IPR010543); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G46620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|70034 : 90.1) no description available & (reliability: 488.0) & (original description: Putative Sb01g039760, Description = Putative uncharacterized protein Sb01g039760, PFAM = PF14369;PF13639;PF06547)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold31248_2056-11381' '(at5g45290 : 128.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT4G11680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative Ccrd_026340, Description = Zinc finger, RING/FYVE/PHD-type, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold32168_1-5386' '(at1g06770 : 192.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. The DRIP1-GFP fusion protein is nuclear-localized. DRIP1 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 1 (DRIP1); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 2 (TAIR:AT2G30580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative PGSC0003DMG400004205, Description = E3 ubiquitin protein ligase DRIP2, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold32330_15695-22561' '(at1g30860 : 140.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: stem, stamen, pollen tube; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G34920.1); Has 4912 Blast hits to 4241 proteins in 362 species: Archae - 9; Bacteria - 172; Metazoa - 2090; Fungi - 292; Plants - 512; Viruses - 97; Other Eukaryotes - 1740 (source: NCBI BLink). & (gnl|cdd|39374 : 82.4) no description available & (reliability: 280.0) & (original description: Putative TRIUR3_01850, Description = Protein neuralized, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold33067_1-5309' '(at2g26000 : 339.0) BRAP2 RING ZnF UBP domain-containing protein 2 (BRIZ2); FUNCTIONS IN: catalytic activity, zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: BRCA1-associated 2 (InterPro:IPR011422), Zinc finger, UBP-type (InterPro:IPR001607), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: zinc finger (ubiquitin-hydrolase) domain-containing protein (TAIR:AT2G42160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36022 : 289.0) no description available & (gnl|cdd|85890 : 88.5) no description available & (reliability: 678.0) & (original description: Putative brap, Description = BRCA1-associated protein, PFAM = PF13639;PF02148)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold33364_1902-13057' '(at1g76390 : 137.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: senescence-associated E3 ubiquitin ligase 1 (TAIR:AT1G20780.1); Has 2889 Blast hits to 2662 proteins in 212 species: Archae - 0; Bacteria - 26; Metazoa - 333; Fungi - 292; Plants - 2003; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative glysoja_034332, Description = U-box domain-containing protein 44, PFAM = PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold33887_1-3826' '(at1g29340 : 835.0) Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity. It is required for cell death and full resistance specified by Arabidopsis RPM1 and RPS4 resistance proteins against Pseudomonas syringae pv tomato.; plant U-box 17 (PUB17); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: defense response to fungus, incompatible interaction, defense response, incompatible interaction, apoptosis, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G01830.1); Has 4178 Blast hits to 3456 proteins in 244 species: Archae - 2; Bacteria - 18; Metazoa - 476; Fungi - 388; Plants - 2844; Viruses - 3; Other Eukaryotes - 447 (source: NCBI BLink). & (q64ha9|spl11_orysa : 253.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 100.0) no description available & (reliability: 1670.0) & (original description: Putative PUB17, Description = U-box domain-containing protein 17, PFAM = PF04564;PF00514)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold34386_4706-7113' '(at5g42200 : 115.0) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G49220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative ATL23, Description = E3 ubiquitin-protein ligase ATL23, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold36104_20013-23997' '(at5g02750 : 134.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G19950.1); Has 8586 Blast hits to 8564 proteins in 268 species: Archae - 0; Bacteria - 6; Metazoa - 2607; Fungi - 605; Plants - 4117; Viruses - 22; Other Eukaryotes - 1229 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative SGR9, Description = E3 ubiquitin-protein ligase SGR9, amyloplastic, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold36661_5157-11446' '(at2g38970 : 758.0) Zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G54780.1); Has 4418 Blast hits to 4397 proteins in 764 species: Archae - 94; Bacteria - 1613; Metazoa - 1251; Fungi - 170; Plants - 535; Viruses - 5; Other Eukaryotes - 750 (source: NCBI BLink). & (gnl|cdd|29239 : 173.0) no description available & (reliability: 1516.0) & (original description: Putative RZFP6, Description = C3HC4 type zinc finger protein, PFAM = PF00092;PF14624;PF17123)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold36705_1-4156' '(at3g47180 : 117.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G19910.1); Has 6899 Blast hits to 6791 proteins in 270 species: Archae - 0; Bacteria - 34; Metazoa - 1877; Fungi - 301; Plants - 3664; Viruses - 39; Other Eukaryotes - 984 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative Sb07g024936, Description = Putative uncharacterized protein Sb07g024936, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold36812_15770-21034' '(at1g02610 : 120.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT4G02075.1); Has 1637 Blast hits to 1605 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 761; Fungi - 107; Plants - 616; Viruses - 18; Other Eukaryotes - 135 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative Pit1, Description = At4g02075, PFAM = PF12428;PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold37717_2260-6225' '(at5g06490 : 92.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G35910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative ATL70, Description = RING-H2 finger protein ATL70, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold37859_4207-9805' '(at4g00335 : 122.0) RING-H2 finger B1A (RHB1A); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative Sb01g026330, Description = Putative uncharacterized protein Sb01g026330, PFAM = PF12678)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold41619_12338-14314' '(at1g69330 : 225.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G29270.2); Has 288 Blast hits to 287 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 134; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 450.0) & (original description: Putative Sb01g043230, Description = Putative uncharacterized protein Sb01g043230, PFAM = PF13445)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold43460_3081-9630' '(at2g26350 : 327.0) Zinc-binding peroxisomal integral membrane protein (PEX10). Inserted directly from the cytosol into peroxisomes and is involved in importing proteins into the peroxisome. Required for embryogenesis.; peroxin 10 (PEX10); FUNCTIONS IN: zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, peroxisome; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Pex, N-terminal (InterPro:IPR006845), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING membrane-anchor 1 (TAIR:AT4G03510.2); Has 4616 Blast hits to 4603 proteins in 297 species: Archae - 0; Bacteria - 0; Metazoa - 2406; Fungi - 531; Plants - 966; Viruses - 101; Other Eukaryotes - 612 (source: NCBI BLink). & (gnl|cdd|35538 : 172.0) no description available & (reliability: 654.0) & (original description: Putative BnaA09g40210D, Description = BnaA09g40210D protein, PFAM = PF04757;PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold43538_8824-11522' '(gnl|cdd|36041 : 156.0) no description available & (at4g03510 : 146.0) RMA1 encodes a novel 28 kDa protein with a RING finger motif and a C-terminal membrane-anchoring domain that is involved in the secretory pathway. Has E3 ubiquitin ligase activity.; RING membrane-anchor 1 (RMA1); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING membrane-anchor 2 (TAIR:AT4G28270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative RMA1H1, Description = E3 ubiquitin-protein ligase RMA1H1, PFAM = PF00097)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold43581_12395-15582' '(at3g46620 : 206.0) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Protein of unknown function DUF1117 (InterPro:IPR010543); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT5G59550.1); Has 8876 Blast hits to 8844 proteins in 271 species: Archae - 0; Bacteria - 6; Metazoa - 2388; Fungi - 760; Plants - 4652; Viruses - 43; Other Eukaryotes - 1027 (source: NCBI BLink). & (gnl|cdd|70034 : 89.3) no description available & (reliability: 412.0) & (original description: Putative DURF2, Description = E3 ubiquitin-protein ligase RING1, PFAM = PF13639;PF06547;PF14369)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold47346_1-11700' '(at3g45630 : 658.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|37279 : 256.0) no description available & (gnl|cdd|34774 : 219.0) no description available & (reliability: 1316.0) & (original description: Putative cnot4, Description = CCR4-NOT transcription complex subunit 4, PFAM = PF14570;PF00076)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold48382_502-8277' '(at5g45290 : 127.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT4G11680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39828 : 83.1) no description available & (reliability: 254.0) & (original description: Putative glysoja_022438, Description = RING-H2 finger protein ATL65, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold49787_1122-4267' '(at3g46620 : 255.0) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Protein of unknown function DUF1117 (InterPro:IPR010543); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT5G59550.1); Has 8876 Blast hits to 8844 proteins in 271 species: Archae - 0; Bacteria - 6; Metazoa - 2388; Fungi - 760; Plants - 4652; Viruses - 43; Other Eukaryotes - 1027 (source: NCBI BLink). & (gnl|cdd|70034 : 91.6) no description available & (reliability: 510.0) & (original description: Putative BnaC04g05710D, Description = BnaC04g05710D protein, PFAM = PF14369;PF13639;PF06547)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold50018_10755-14523' '(gnl|cdd|36316 : 182.0) no description available & (at1g32740 : 158.0) SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: SBP (S-ribonuclease binding protein) family protein (TAIR:AT4G17680.1); Has 798 Blast hits to 798 proteins in 121 species: Archae - 0; Bacteria - 4; Metazoa - 316; Fungi - 15; Plants - 388; Viruses - 21; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative At1g32740, Description = SBP (S-ribonuclease binding protein) family protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold54240_11084-20670' '(at1g68820 : 625.0) Transmembrane Fragile-X-F-associated protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane Fragile-X-F-associated protein (InterPro:IPR019396), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Transmembrane Fragile-X-F-associated protein (TAIR:AT1G73950.1); Has 2761 Blast hits to 2715 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 1602; Fungi - 4; Plants - 542; Viruses - 213; Other Eukaryotes - 400 (source: NCBI BLink). & (reliability: 1250.0) & (original description: Putative At1g68820, Description = Putative uncharacterized protein At1g68820, PFAM = PF13920;PF10269)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold54651_10122-12742' '(at4g03965 : 143.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G22250.1); Has 1224 Blast hits to 1224 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 580; Fungi - 72; Plants - 352; Viruses - 38; Other Eukaryotes - 182 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative ZFL, Description = Zinc finger, RING/FYVE/PHD-type, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold56497_2357-9736' '(at3g63530 : 193.0) Encodes a novel E3 ubiquitin ligase that acts as a central negative regulator of Arabidopsis floral organ size. Organ size is limited by restricting the period of proliferative growth, rather than the rate of growth and appears to act in a novel pathway, independent of ANT and JAG. Both mRNA and protein are expressed in all actively growing regions of the plant and the vasculature and the protein is rapidly turned over by proteasome-mediated degradation.; BIG BROTHER (BB); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G19910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 386.0) & (original description: Putative BB, Description = E3 ubiquitin ligase BIG BROTHER, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold58231_1-6139' '(at5g42940 : 304.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G45180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 608.0) & (original description: Putative ZFP1, Description = C3HC4-type RING finger protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold61419_497-5796' '(at1g24330 : 903.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G67530.2); Has 3064 Blast hits to 2955 proteins in 242 species: Archae - 0; Bacteria - 60; Metazoa - 394; Fungi - 149; Plants - 2167; Viruses - 3; Other Eukaryotes - 291 (source: NCBI BLink). & (q64ha9|spl11_orysa : 114.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 97.2) no description available & (reliability: 1806.0) & (original description: Putative PUB6, Description = U-box domain-containing protein 6, PFAM = PF05804;PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold63293_1576-10931' '(at2g30580 : 410.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 2 (DRIP2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 1 (TAIR:AT1G06770.1); Has 1631 Blast hits to 1626 proteins in 163 species: Archae - 0; Bacteria - 2; Metazoa - 1227; Fungi - 58; Plants - 232; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|37871 : 126.0) no description available & (reliability: 820.0) & (original description: Putative DRIP2, Description = E3 ubiquitin protein ligase DRIP2, PFAM = PF13923)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold64639_1-1743' '(at1g67856 : 95.1) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G24580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative RZFP1, Description = RING-H2 type zinc finger, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold68293_5340-8386' '(at4g33565 : 128.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G72220.1); Has 9700 Blast hits to 9677 proteins in 303 species: Archae - 0; Bacteria - 6; Metazoa - 2357; Fungi - 776; Plants - 5096; Viruses - 103; Other Eukaryotes - 1362 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative ATL54, Description = RING-H2 finger protein ATL54, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold68436_1-7937' '(at4g21430 : 404.0) B160; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, RING-type (InterPro:IPR001841), Transcription factor jumonji (InterPro:IPR013129), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G11950.1); Has 965 Blast hits to 873 proteins in 89 species: Archae - 0; Bacteria - 0; Metazoa - 302; Fungi - 24; Plants - 623; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|36570 : 248.0) no description available & (reliability: 780.0) & (original description: Putative glysoja_014359, Description = Lysine-specific demethylase 3A-A, PFAM = PF08879;PF02373)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold69032_1178-7675' '(at4g01270 : 211.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01245.1); Has 5689 Blast hits to 5015 proteins in 477 species: Archae - 145; Bacteria - 387; Metazoa - 2946; Fungi - 366; Plants - 512; Viruses - 10; Other Eukaryotes - 1323 (source: NCBI BLink). & (gnl|cdd|36045 : 112.0) no description available & (reliability: 422.0) & (original description: Putative hip1, Description = A_IG002N01.19 protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold70818_4355-8687' '(at1g32740 : 179.0) SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: SBP (S-ribonuclease binding protein) family protein (TAIR:AT4G17680.1); Has 798 Blast hits to 798 proteins in 121 species: Archae - 0; Bacteria - 4; Metazoa - 316; Fungi - 15; Plants - 388; Viruses - 21; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|36316 : 145.0) no description available & (reliability: 358.0) & (original description: Putative BnaC07g19870D, Description = BnaC07g19870D protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold72210_5559-8434' '(at3g25030 : 130.0) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G13100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative ZFL, Description = Zinc finger-like protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold73570_1095-8031' '(at1g20780 : 985.0) Encodes a protein containing a U-box and an ARM domain.; senescence-associated E3 ubiquitin ligase 1 (SAUL1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of chlorophyll catabolic process, regulation of chlorophyll biosynthetic process, leaf senescence, regulation of abscisic acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G76390.2); Has 2790 Blast hits to 2660 proteins in 201 species: Archae - 0; Bacteria - 20; Metazoa - 434; Fungi - 161; Plants - 1969; Viruses - 3; Other Eukaryotes - 203 (source: NCBI BLink). & (reliability: 1956.0) & (original description: Putative PUB43, Description = U-box domain-containing protein 43, PFAM = PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold74115_3806-8376' '(at5g42940 : 265.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G45180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 530.0) & (original description: Putative MBR1, Description = E3 ubiquitin ligase BIG BROTHER, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold77735_3534-7036' '(at4g30400 : 252.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to karrikin; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G18650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 504.0) & (original description: Putative ATL13, Description = RING-H2 finger protein ATL13, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold79283_1-3855' '(at5g43420 : 232.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G04360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 464.0) & (original description: Putative ATL1, Description = RING-H2 finger protein ATL1, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold81326_2665-5384' '(at2g27940 : 140.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: leaf apex, root, carpel, leaf; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G05200.1); Has 9623 Blast hits to 9595 proteins in 286 species: Archae - 0; Bacteria - 0; Metazoa - 2405; Fungi - 805; Plants - 5009; Viruses - 51; Other Eukaryotes - 1353 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative BnaA07g13450D, Description = BnaA07g13450D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold82056_518-5551' '(at5g05830 : 108.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G01070.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative PGSC0003DMG400026745, Description = BnaC04g26490D protein, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold85893_1596-5632' '(at1g68070 : 263.0) Zinc finger, C3HC4 type (RING finger) family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-finger protein for embryogenesis (TAIR:AT2G01735.1); Has 10060 Blast hits to 10035 proteins in 290 species: Archae - 0; Bacteria - 6; Metazoa - 2675; Fungi - 773; Plants - 5064; Viruses - 53; Other Eukaryotes - 1489 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative LOC100281150, Description = Putative RING zinc finger domain superfamily protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold96450_1877-4493' '(at4g21350 : 366.0) Encodes a U-box/ARM repeat protein required fore self-incompatibility.; plant U-box 8 (PUB8); FUNCTIONS IN: ubiquitin-protein ligase activity, binding, zinc ion binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 13 (TAIR:AT3G46510.1); Has 3561 Blast hits to 3109 proteins in 223 species: Archae - 0; Bacteria - 18; Metazoa - 344; Fungi - 298; Plants - 2564; Viruses - 3; Other Eukaryotes - 334 (source: NCBI BLink). & (q64ha9|spl11_orysa : 143.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 100.0) no description available & (reliability: 732.0) & (original description: Putative PUB8, Description = U-box domain-containing protein 8, PFAM = PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold97212_839-4056' '(at1g72220 : 149.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G33565.1); Has 9784 Blast hits to 9740 proteins in 308 species: Archae - 0; Bacteria - 7; Metazoa - 2351; Fungi - 909; Plants - 4998; Viruses - 86; Other Eukaryotes - 1433 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative ATL54, Description = RING-H2 finger protein ATL54, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold99179_403-4144' '(at5g01830 : 332.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 17 (TAIR:AT1G29340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 120.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 664.0) & (original description: Putative PUB16, Description = U-box domain-containing protein 16, PFAM = PF00514)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.3scaffold118526_632-2276' '(at1g26800 : 102.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G14200.1); Has 9899 Blast hits to 9869 proteins in 270 species: Archae - 0; Bacteria - 0; Metazoa - 2681; Fungi - 828; Plants - 5098; Viruses - 14; Other Eukaryotes - 1278 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative RING1, Description = Zinc finger, RING/FYVE/PHD-type, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold1_1667599-1673902' '(at5g42940 : 309.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G45180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 618.0) & (original description: Putative HIP1, Description = RING finger protein 165 family, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold18_12362-245912' '(at4g10150 : 152.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G10160.1); Has 9409 Blast hits to 9387 proteins in 290 species: Archae - 0; Bacteria - 6; Metazoa - 2329; Fungi - 766; Plants - 4947; Viruses - 49; Other Eukaryotes - 1312 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative ATL7, Description = RING-H2 finger protein ATL7, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold26_373514-378013' '(at1g02610 : 181.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT4G02075.1); Has 1637 Blast hits to 1605 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 761; Fungi - 107; Plants - 616; Viruses - 18; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|36822 : 83.1) no description available & (reliability: 362.0) & (original description: Putative Pit1, Description = At4g02075, PFAM = PF12428;PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold53_162113-169158' '(at5g50170 : 977.0) C2 calcium/lipid-binding and GRAM domain containing protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), GRAM (InterPro:IPR004182), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding and GRAM domain containing protein (TAIR:AT1G03370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36250 : 336.0) no description available & (reliability: 1774.0) & (original description: Putative At5g50170, Description = C2 and GRAM domain-containing protein At5g50170, PFAM = PF02893;PF00168;PF16016;PF16016)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold132_61054-65178' '(at2g15580 : 129.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 258.0) & (original description: Putative BnaA07g04160D, Description = BnaA07g04160D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold230_700890-704307' '(at4g33565 : 155.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G72220.1); Has 9700 Blast hits to 9677 proteins in 303 species: Archae - 0; Bacteria - 6; Metazoa - 2357; Fungi - 776; Plants - 5096; Viruses - 103; Other Eukaryotes - 1362 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative ATL52, Description = RING-H2 finger protein ATL54, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold230_704404-707379' '(at1g72220 : 144.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G33565.1); Has 9784 Blast hits to 9740 proteins in 308 species: Archae - 0; Bacteria - 7; Metazoa - 2351; Fungi - 909; Plants - 4998; Viruses - 86; Other Eukaryotes - 1433 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative ATL52, Description = RING-H2 finger protein ATL54, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold252_507036-524319' '(at5g03450 : 448.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03750.1); Has 6680 Blast hits to 3674 proteins in 290 species: Archae - 4; Bacteria - 114; Metazoa - 3367; Fungi - 525; Plants - 736; Viruses - 186; Other Eukaryotes - 1748 (source: NCBI BLink). & (gnl|cdd|36858 : 231.0) no description available & (reliability: 896.0) & (original description: Putative RFWD3, Description = E3 ubiquitin-protein ligase RFWD3, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold376_688075-696284' '(at3g46510 : 816.0) Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. Can be phosphorylated in vitro by MLPK, ARK1, and ARK2 but not by SD1-29.; plant U-box 13 (PUB13); CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: PLANT U-BOX 12 (TAIR:AT2G28830.1); Has 8308 Blast hits to 5676 proteins in 314 species: Archae - 6; Bacteria - 52; Metazoa - 2498; Fungi - 809; Plants - 4013; Viruses - 3; Other Eukaryotes - 927 (source: NCBI BLink). & (q64ha9|spl11_orysa : 658.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 102.0) no description available & (gnl|cdd|39425 : 97.8) no description available & (reliability: 1632.0) & (original description: Putative PUB13, Description = U-box domain-containing protein 13, PFAM = PF00514;PF00514;PF00514;PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold382_320766-326289' '(at1g71980 : 361.0) Protease-associated (PA) RING/U-box zinc finger family protein; FUNCTIONS IN: peptidase activity, zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: Protease-associated (PA) RING/U-box zinc finger family protein (TAIR:AT1G22670.1); Has 15658 Blast hits to 9675 proteins in 411 species: Archae - 0; Bacteria - 271; Metazoa - 3014; Fungi - 1211; Plants - 4865; Viruses - 29; Other Eukaryotes - 6268 (source: NCBI BLink). & (gnl|cdd|39828 : 263.0) no description available & (gnl|cdd|80345 : 100.0) no description available & (reliability: 722.0) & (original description: Putative RMR1, Description = Receptor homology region, transmembrane domain- and RING domain-containing protein 1, PFAM = PF13639;PF02225)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold400_154001-165080' '(at1g20780 : 216.0) Encodes a protein containing a U-box and an ARM domain.; senescence-associated E3 ubiquitin ligase 1 (SAUL1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of chlorophyll catabolic process, regulation of chlorophyll biosynthetic process, leaf senescence, regulation of abscisic acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G76390.2); Has 2790 Blast hits to 2660 proteins in 201 species: Archae - 0; Bacteria - 20; Metazoa - 434; Fungi - 161; Plants - 1969; Viruses - 3; Other Eukaryotes - 203 (source: NCBI BLink). & (gnl|cdd|47808 : 84.9) no description available & (reliability: 420.0) & (original description: Putative glysoja_015640, Description = U-box domain-containing protein 43, PFAM = PF05659;PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold512_271855-287839' '(at2g22120 : 447.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G11020.1). & (gnl|cdd|36822 : 82.0) no description available & (reliability: 894.0) & (original description: Putative ZNF2, Description = RING/FYVE/PHD zinc finger superfamily protein, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold613_329615-332475' '(at1g68180 : 142.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G56580.3); Has 9058 Blast hits to 9033 proteins in 265 species: Archae - 0; Bacteria - 0; Metazoa - 2534; Fungi - 573; Plants - 4692; Viruses - 31; Other Eukaryotes - 1228 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative RCOM_0065560, Description = Zinc finger protein, putative, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold648_605279-612090' '(at1g71020 : 636.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G23030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q64ha9|spl11_orysa : 422.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 95.3) no description available & (gnl|cdd|39425 : 88.2) no description available & (reliability: 1272.0) & (original description: Putative PUB10, Description = U-box domain-containing protein 10, PFAM = PF04564;PF00514;PF00514)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold720_344737-352260' '(at3g06140 : 297.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G19080.1); Has 7743 Blast hits to 5478 proteins in 376 species: Archae - 2; Bacteria - 144; Metazoa - 2405; Fungi - 531; Plants - 3352; Viruses - 272; Other Eukaryotes - 1037 (source: NCBI BLink). & (gnl|cdd|39466 : 260.0) no description available & (reliability: 594.0) & (original description: Putative LUL2, Description = Probable E3 ubiquitin-protein ligase LUL2, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold794_459625-462278' '(at3g25030 : 97.4) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G13100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 194.8) & (original description: Putative ZFL, Description = Zinc finger family protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold850_15942-18259' '(at2g35000 : 90.9) E3 ligase-like protein induced by chitin oligomers.; RING/U-box superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: defense response to fungus, response to chitin; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell, hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G35330.1); Has 9249 Blast hits to 9225 proteins in 281 species: Archae - 0; Bacteria - 6; Metazoa - 2393; Fungi - 760; Plants - 4794; Viruses - 39; Other Eukaryotes - 1257 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative , Description = RING-H2 finger ATL2-like protein, putative, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold964_340095-353833' '(at3g47550 : 211.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to salt stress; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G62460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36822 : 144.0) no description available & (reliability: 422.0) & (original description: Putative ZFP1, Description = E3 ubiquitin-protein ligase MARCH3, PFAM = PF12428;PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold1096_294610-301449' '(at5g01960 : 357.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G65040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39838 : 151.0) no description available & (reliability: 714.0) & (original description: Putative RNF1, Description = RING finger protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold1113_359084-365046' '(at3g08505 : 320.0) zinc finger (CCCH-type/C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36257 : 125.0) no description available & (reliability: 640.0) & (original description: Putative At3g63550, Description = Zinc finger CCCH domain-containing protein 69, PFAM = PF00097;PF00642;PF00642)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold1114_398189-404363' '(at2g23140 : 783.0) RING/U-box superfamily protein with ARM repeat domain; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G67340.1). & (q64ha9|spl11_orysa : 225.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|39425 : 95.9) no description available & (gnl|cdd|47808 : 95.7) no description available & (reliability: 1566.0) & (original description: Putative PUB4, Description = U-box domain-containing protein 4, PFAM = PF00514;PF00514;PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold1137_333031-335753' '(at2g42360 : 129.0) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G42350.1); Has 8862 Blast hits to 8837 proteins in 292 species: Archae - 0; Bacteria - 0; Metazoa - 2202; Fungi - 673; Plants - 4781; Viruses - 60; Other Eukaryotes - 1146 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative ATL41, Description = E3 ubiquitin-protein ligase ATL41, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold1257_297284-303407' '(at4g39140 : 257.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G21500.1); Has 1557 Blast hits to 280 proteins in 56 species: Archae - 0; Bacteria - 6; Metazoa - 62; Fungi - 44; Plants - 176; Viruses - 0; Other Eukaryotes - 1269 (source: NCBI BLink). & (reliability: 514.0) & (original description: Putative BnaA01g05370D, Description = BnaA01g05370D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold1379_454579-459625' '(at3g24800 : 294.0) Contains two ring finger domains and one ZZ domain. Week similarity to yeast Rad18p. Putative component of the N-end rule pathway (ubiquitin-dependent proteolysis).; proteolysis 1 (PRT1); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT1G18660.1); Has 4154 Blast hits to 3358 proteins in 276 species: Archae - 0; Bacteria - 0; Metazoa - 2882; Fungi - 341; Plants - 509; Viruses - 3; Other Eukaryotes - 419 (source: NCBI BLink). & (gnl|cdd|39361 : 80.8) no description available & (reliability: 588.0) & (original description: Putative PRT1, Description = E3 ubiquitin-protein ligase PRT1, PFAM = PF00569;PF13445;PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold1454_283626-307830' '(at4g00990 : 617.0) Transcription factor jumonji (jmjC) domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, RING-type (InterPro:IPR001841), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G11950.1); Has 966 Blast hits to 671 proteins in 113 species: Archae - 0; Bacteria - 8; Metazoa - 538; Fungi - 54; Plants - 301; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36570 : 355.0) no description available & (reliability: 1234.0) & (original description: Putative IBM1, Description = Lysine-specific demethylase 3B, PFAM = PF02373)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold1481_173360-175851' '(at1g15100 : 130.0) Encodes a putative RING-H2 finger protein RHA2a.; RING-H2 finger A2A (RHA2A); FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: response to salt stress, positive regulation of abscisic acid mediated signaling pathway, regulation of response to osmotic stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger protein 2B (TAIR:AT2G01150.1); Has 8620 Blast hits to 8597 proteins in 260 species: Archae - 0; Bacteria - 0; Metazoa - 2194; Fungi - 672; Plants - 4576; Viruses - 12; Other Eukaryotes - 1166 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative RHA2A, Description = E3 ubiquitin-protein ligase RHA2A, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold1506_162829-166070' '(at4g28890 : 319.0) RING/U-box superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: root stele, root endodermis, hypocotyl, root, primary root differentiation zone; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G20030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9lrb7|el5_orysa : 80.1) E3 ubiquitin-protein ligase EL5 (EC 6.3.2.-) - Oryza sativa (Rice) & (reliability: 638.0) & (original description: Putative ATL42, Description = E3 ubiquitin-protein ligase ATL42, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold1506_162841-167484' '(at4g28890 : 295.0) RING/U-box superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: root stele, root endodermis, hypocotyl, root, primary root differentiation zone; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G20030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9lrb7|el5_orysa : 80.1) E3 ubiquitin-protein ligase EL5 (EC 6.3.2.-) - Oryza sativa (Rice) & (reliability: 590.0) & (original description: Putative ATL12, Description = E3 ubiquitin-protein ligase ATL42, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold1886_23979-39210' '(at1g65430 : 780.0) ARIADNE 8 (ARI8); FUNCTIONS IN: ubiquitin-protein ligase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: IBR domain-containing protein (TAIR:AT2G31510.1); Has 2973 Blast hits to 2950 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 1311; Fungi - 559; Plants - 644; Viruses - 3; Other Eukaryotes - 456 (source: NCBI BLink). & (gnl|cdd|37026 : 397.0) no description available & (reliability: 1560.0) & (original description: Putative ARI8, Description = Probable E3 ubiquitin-protein ligase ARI8, PFAM = PF01485)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold1895_323131-326589' '(at3g48070 : 137.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G62910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37279 : 117.0) no description available & (reliability: 274.0) & (original description: Putative At5g62910, Description = At5g62910, PFAM = PF14570)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold1947_119794-122447' '(at4g03965 : 140.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G22250.1); Has 1224 Blast hits to 1224 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 580; Fungi - 72; Plants - 352; Viruses - 38; Other Eukaryotes - 182 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative At4g03965, Description = C3HC4 type RING-finger protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold2028_321067-325160' '(at3g27330 : 189.0) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF23) (TAIR:AT5G40720.1); Has 9172 Blast hits to 9085 proteins in 2351 species: Archae - 0; Bacteria - 208; Metazoa - 7155; Fungi - 537; Plants - 665; Viruses - 17; Other Eukaryotes - 590 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative Sb02g043730, Description = Putative uncharacterized protein Sb02g043730, PFAM = PF00097)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold2080_320191-337107' '(at3g53690 : 225.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G14250.1); Has 3158 Blast hits to 3141 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 1307; Fungi - 709; Plants - 671; Viruses - 0; Other Eukaryotes - 471 (source: NCBI BLink). & (gnl|cdd|37023 : 156.0) no description available & (reliability: 450.0) & (original description: Putative BnaA09g40490D, Description = BnaA09g40490D protein, PFAM = PF01485;PF00097)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold2084_356309-359185' '(at2g38970 : 280.0) Zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G54780.1); Has 4418 Blast hits to 4397 proteins in 764 species: Archae - 94; Bacteria - 1613; Metazoa - 1251; Fungi - 170; Plants - 535; Viruses - 5; Other Eukaryotes - 750 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative RZFP6, Description = C3HC4-type RING finger-containing protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold2099_168516-175467' '(at3g05670 : 132.0) RING/U-box protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein (TAIR:AT1G67180.1); Has 32410 Blast hits to 21304 proteins in 1066 species: Archae - 126; Bacteria - 4266; Metazoa - 11275; Fungi - 4969; Plants - 2419; Viruses - 550; Other Eukaryotes - 8805 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative PGSC0003DMG400004060, Description = PHD and RING finger domain-containing protein 1, PFAM = PF00628)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold2231_385841-390957' '(at5g38070 : 172.0) RING/FYVE/PHD zinc finger superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT2G01275.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36822 : 94.3) no description available & (reliability: 344.0) & (original description: Putative glysoja_016201, Description = E3 ubiquitin-protein ligase MARCH1, PFAM = PF12428;PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold2231_386799-390417' '(at5g38070 : 172.0) RING/FYVE/PHD zinc finger superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT2G01275.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36822 : 94.7) no description available & (reliability: 344.0) & (original description: Putative glysoja_016201, Description = E3 ubiquitin-protein ligase MARCH1, PFAM = PF12906;PF12428)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold2235_320402-325242' '(at5g22000 : 291.0) encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. Double mutant analyses with RHF1a suggests that RHF2a may be involved in targetting ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF2a is expressed in all four floral whorls and is present at ~8-fold higher levels than RHF1a in inflorescences by RT-PCR analyses.; RING-H2 group F2A (RHF2A); FUNCTIONS IN: zinc ion binding; INVOLVED IN: regulation of cell cycle, proteolysis involved in cellular protein catabolic process, megagametogenesis, microgametogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 group F1A (TAIR:AT4G14220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 582.0) & (original description: Putative ophe-8, Description = RING-H2 zinc finger protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold2266_93997-104339' '(at3g05545 : 264.0) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, PHD-type (InterPro:IPR001965); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G47700.1); Has 1560 Blast hits to 1269 proteins in 195 species: Archae - 0; Bacteria - 91; Metazoa - 627; Fungi - 277; Plants - 288; Viruses - 4; Other Eukaryotes - 273 (source: NCBI BLink). & (reliability: 528.0) & (original description: Putative vip2, Description = VIP2 protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold2274_228320-231471' '(at3g05200 : 164.0) Encodes a putative RING-H2 zinc finger protein ATL6 (ATL6).; ATL6; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: carbon/nitrogen insensitive 1 (TAIR:AT5G27420.1); Has 9947 Blast hits to 9919 proteins in 286 species: Archae - 0; Bacteria - 0; Metazoa - 2610; Fungi - 790; Plants - 5036; Viruses - 50; Other Eukaryotes - 1461 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative PGSC0003DMG400017762, Description = E3 ubiquitin-protein ligase ATL6, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold2556_146037-230711' '(at3g19950 : 148.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G55530.1); Has 11106 Blast hits to 11075 proteins in 297 species: Archae - 0; Bacteria - 6; Metazoa - 2940; Fungi - 1152; Plants - 5266; Viruses - 73; Other Eukaryotes - 1669 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative RHC1A, Description = E3 ubiquitin-protein ligase RING1, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold2672_222846-228570' '(at1g06770 : 189.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. The DRIP1-GFP fusion protein is nuclear-localized. DRIP1 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 1 (DRIP1); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 2 (TAIR:AT2G30580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative glysoja_002556, Description = E3 ubiquitin protein ligase DRIP2, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold2737_106852-112751' '(at5g15820 : 126.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G02340.1); Has 8420 Blast hits to 8405 proteins in 260 species: Archae - 0; Bacteria - 6; Metazoa - 2461; Fungi - 626; Plants - 4186; Viruses - 29; Other Eukaryotes - 1112 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative PGSC0003DMG400001386, Description = Zinc finger, RING/FYVE/PHD-type, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold2991_1-11188' '(at3g53690 : 163.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G14250.1); Has 3158 Blast hits to 3141 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 1307; Fungi - 709; Plants - 671; Viruses - 0; Other Eukaryotes - 471 (source: NCBI BLink). & (gnl|cdd|37023 : 125.0) no description available & (reliability: 326.0) & (original description: Putative RCOM_1205110, Description = Zinc finger protein, putative, PFAM = PF00097;PF16987;PF16987;PF16987;PF01485)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold2993_720-4863' '(at5g01830 : 618.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 17 (TAIR:AT1G29340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 213.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 98.8) no description available & (reliability: 1236.0) & (original description: Putative PUB16, Description = U-box domain-containing protein 16, PFAM = PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold3020_154549-159969' '(at3g55530 : 138.0) Encodes an intracellular membrane localized protein with E3 ligase activity that is involved in regulation of ABA signaling. Loss of function alleles show decreased sensitivity to ABA. Overexpression results in increased sensitivity to ABA.; SALT- AND DROUGHT-INDUCED RING FINGER1 (SDIR1); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G04790.1); Has 9775 Blast hits to 9747 proteins in 287 species: Archae - 0; Bacteria - 6; Metazoa - 2690; Fungi - 760; Plants - 4971; Viruses - 89; Other Eukaryotes - 1259 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative PGSC0003DMG400002152, Description = , PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold3089_435-7516' '(at2g38970 : 485.0) Zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G54780.1); Has 4418 Blast hits to 4397 proteins in 764 species: Archae - 94; Bacteria - 1613; Metazoa - 1251; Fungi - 170; Plants - 535; Viruses - 5; Other Eukaryotes - 750 (source: NCBI BLink). & (gnl|cdd|29239 : 157.0) no description available & (reliability: 970.0) & (original description: Putative RZFP6, Description = C3HC4-type RING finger-containing protein, PFAM = PF00092;PF14624;PF17123)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold3342_3736-8780' '(at4g03000 : 420.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G03365.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 840.0) & (original description: Putative BnaA09g01220D, Description = BnaA09g01220D protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold3553_18447-21634' '(at3g46620 : 206.0) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Protein of unknown function DUF1117 (InterPro:IPR010543); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT5G59550.1); Has 8876 Blast hits to 8844 proteins in 271 species: Archae - 0; Bacteria - 6; Metazoa - 2388; Fungi - 760; Plants - 4652; Viruses - 43; Other Eukaryotes - 1027 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative BnaC03g22210D, Description = BnaC03g22210D protein, PFAM = PF13639;PF06547;PF14369)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold3694_19929-31139' '(at5g44280 : 249.0) Encodes a nuclear localized protein with similarity to animal polycomb repressive core complex1 (PRC1) core component RING.Appears to function redundantly with ATRING1b, a close paralog. Both interact physically with CLF and LHP1 and appear to function together to repress class I KNOX gene expression.; RING 1A (RING1A); FUNCTIONS IN: zinc ion binding; INVOLVED IN: negative regulation of gene expression, epigenetic; LOCATED IN: nucleus, PRC1 complex; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: RING 1B (TAIR:AT1G03770.1); Has 9014 Blast hits to 7495 proteins in 568 species: Archae - 41; Bacteria - 677; Metazoa - 3346; Fungi - 1171; Plants - 610; Viruses - 87; Other Eukaryotes - 3082 (source: NCBI BLink). & (gnl|cdd|35532 : 166.0) no description available & (reliability: 498.0) & (original description: Putative RING1B, Description = Putative E3 ubiquitin-protein ligase RING1b, PFAM = PF13923)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold3742_146198-156252' '(at2g22120 : 379.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G11020.1). & (reliability: 758.0) & (original description: Putative ZNF2, Description = Zinc finger family protein, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold4394_61477-132818' '(at1g32360 : 337.0) Zinc finger (CCCH-type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT2G35430.1); Has 13421 Blast hits to 5509 proteins in 634 species: Archae - 13; Bacteria - 2784; Metazoa - 4906; Fungi - 574; Plants - 3348; Viruses - 263; Other Eukaryotes - 1533 (source: NCBI BLink). & (reliability: 674.0) & (original description: Putative C3H8, Description = Zinc finger CCCH domain-containing protein 56, PFAM = PF00642;PF00642)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold4495_56415-59122' '(at5g59550 : 84.7) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Protein of unknown function DUF1117 (InterPro:IPR010543); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G46620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative PGSC0003DMG400018972, Description = E3 ubiquitin-protein ligase RING1-like protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold4829_109440-120600' '(at1g32360 : 340.0) Zinc finger (CCCH-type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT2G35430.1); Has 13421 Blast hits to 5509 proteins in 634 species: Archae - 13; Bacteria - 2784; Metazoa - 4906; Fungi - 574; Plants - 3348; Viruses - 263; Other Eukaryotes - 1533 (source: NCBI BLink). & (reliability: 680.0) & (original description: Putative Os08g0159800, Description = Zinc finger CCCH domain-containing protein 56, PFAM = PF00642;PF00642)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold5130_15638-19399' '(gnl|cdd|36316 : 181.0) no description available & (at1g32740 : 157.0) SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: SBP (S-ribonuclease binding protein) family protein (TAIR:AT4G17680.1); Has 798 Blast hits to 798 proteins in 121 species: Archae - 0; Bacteria - 4; Metazoa - 316; Fungi - 15; Plants - 388; Viruses - 21; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative PGSC0003DMG400001841, Description = Baculoviral IAP repeat-containing protein 2, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold5253_130324-135521' '(at3g55530 : 126.0) Encodes an intracellular membrane localized protein with E3 ligase activity that is involved in regulation of ABA signaling. Loss of function alleles show decreased sensitivity to ABA. Overexpression results in increased sensitivity to ABA.; SALT- AND DROUGHT-INDUCED RING FINGER1 (SDIR1); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G04790.1); Has 9775 Blast hits to 9747 proteins in 287 species: Archae - 0; Bacteria - 6; Metazoa - 2690; Fungi - 760; Plants - 4971; Viruses - 89; Other Eukaryotes - 1259 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative PGSC0003DMG400002152, Description = , PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold5311_121033-124340' '(at3g58030 : 254.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G42030.1). & (gnl|cdd|36041 : 147.0) no description available & (reliability: 508.0) & (original description: Putative BnaA07g37970D, Description = BnaA07g37970D protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold5325_99580-110484' '(at2g26000 : 495.0) BRAP2 RING ZnF UBP domain-containing protein 2 (BRIZ2); FUNCTIONS IN: catalytic activity, zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: BRCA1-associated 2 (InterPro:IPR011422), Zinc finger, UBP-type (InterPro:IPR001607), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: zinc finger (ubiquitin-hydrolase) domain-containing protein (TAIR:AT2G42160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36022 : 397.0) no description available & (gnl|cdd|71023 : 104.0) no description available & (reliability: 990.0) & (original description: Putative BRIZ2, Description = RING domain containing protein BRIZ2, PFAM = PF02148;PF07576;PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold5698_63918-68141' '(at3g27330 : 157.0) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF23) (TAIR:AT5G40720.1); Has 9172 Blast hits to 9085 proteins in 2351 species: Archae - 0; Bacteria - 208; Metazoa - 7155; Fungi - 537; Plants - 665; Viruses - 17; Other Eukaryotes - 590 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative pco138005, Description = C3HC4-type RING zinc finger protein, PFAM = PF13923)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold5713_8609-13656' '(at2g46495 : 270.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G25410.1); Has 16199 Blast hits to 8554 proteins in 281 species: Archae - 0; Bacteria - 0; Metazoa - 3863; Fungi - 941; Plants - 9494; Viruses - 61; Other Eukaryotes - 1840 (source: NCBI BLink). & (reliability: 540.0) & (original description: Putative ATL21A, Description = Putative RING-H2 finger protein ATL21A, PFAM = PF13639;PF13947;PF14380)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold6630_34483-50119' '(at2g39810 : 864.0) A novel protein with a RING finger motif near the amino terminus. Negative regulator of cold responses. Functions as an E3 ligase required for the ubiquitination of ICE1. HOS1 physically interacts with ICE1 and mediates the ubiquitination of ICE1 both in vitro and in vivo. Overexpression represses the expression of CBFs and their downstream genes and confers increased sensitivity to freezing stress.; HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (HOS1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: response to cold, negative regulation of transcription, protein ubiquitination; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; Has 239 Blast hits to 237 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 0; Plants - 80; Viruses - 5; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 1728.0) & (original description: Putative HOS1, Description = E3 ubiquitin-protein ligase HOS1, PFAM = PF13934)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'nbv0.5scaffold8621_8431-18822' '(at3g56590 : 284.0) hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G10810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 516.0) & (original description: Putative BnaC08g27490D, Description = BnaC08g27490D protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00000152ctg011_19325-22736' '(at3g49810 : 532.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G65920.1); Has 2157 Blast hits to 2086 proteins in 103 species: Archae - 0; Bacteria - 14; Metazoa - 79; Fungi - 29; Plants - 1932; Viruses - 3; Other Eukaryotes - 100 (source: NCBI BLink). & (q64ha9|spl11_orysa : 106.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 93.8) no description available & (reliability: 1046.0) & (original description: Putative PUB31, Description = U-box domain-containing protein 31, PFAM = PF04564;PF05804)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00000386ctg002_1-3937' '(at1g73950 : 286.0) Transmembrane Fragile-X-F-associated protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane Fragile-X-F-associated protein (InterPro:IPR019396), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Transmembrane Fragile-X-F-associated protein (TAIR:AT1G18470.1); Has 2761 Blast hits to 2652 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 1645; Fungi - 8; Plants - 510; Viruses - 253; Other Eukaryotes - 345 (source: NCBI BLink). & (reliability: 572.0) & (original description: Putative At1g18470, Description = Transmembrane Fragile-X-F-associated protein, PFAM = PF10269)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00000386ctg002_1258-3965' '(at1g73950 : 240.0) Transmembrane Fragile-X-F-associated protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane Fragile-X-F-associated protein (InterPro:IPR019396), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Transmembrane Fragile-X-F-associated protein (TAIR:AT1G18470.1); Has 2761 Blast hits to 2652 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 1645; Fungi - 8; Plants - 510; Viruses - 253; Other Eukaryotes - 345 (source: NCBI BLink). & (reliability: 480.0) & (original description: Putative At1g18470, Description = Transmembrane Fragile-X-F-associated protein, PFAM = PF10269)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00000554ctg017_1-3632' '(at5g06420 : 398.0) Zinc finger (CCCH-type/C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; LOCATED IN: membrane; EXPRESSED IN: male gametophyte, pollen tube, leaf; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type/C3HC4-type RING finger) family protein (TAIR:AT1G01350.1); Has 883 Blast hits to 880 proteins in 224 species: Archae - 0; Bacteria - 1; Metazoa - 340; Fungi - 209; Plants - 163; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|37024 : 250.0) no description available & (gnl|cdd|34753 : 123.0) no description available & (reliability: 796.0) & (original description: Putative mdlc, Description = RING finger protein 113A, PFAM = PF00642;PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00000675ctg007_5030-9384' '(at5g01160 : 285.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C2H2-type (InterPro:IPR007087); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38143 : 147.0) no description available & (reliability: 570.0) & (original description: Putative BnaCnng03840D, Description = BnaCnng03840D protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00000997ctg036_5575-11146' '(at3g05870 : 150.0) Subunit of the anaphase promoting complex, a ubiquitin ligase complex that regulates progression through the cell cycle.; anaphase-promoting complex/cyclosome 11 (APC11); FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: regulation of mitotic cell cycle; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING-box 1 (TAIR:AT5G20570.1). & (gnl|cdd|36706 : 130.0) no description available & (gnl|cdd|34793 : 92.4) no description available & (reliability: 300.0) & (original description: Putative APC11, Description = Anaphase-promoting complex subunit 11, PFAM = PF12861)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00001627ctg007_3395-5752' '(at5g62910 : 145.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G48070.2); Has 749 Blast hits to 665 proteins in 188 species: Archae - 0; Bacteria - 6; Metazoa - 241; Fungi - 216; Plants - 135; Viruses - 4; Other Eukaryotes - 147 (source: NCBI BLink). & (gnl|cdd|37279 : 122.0) no description available & (reliability: 290.0) & (original description: Putative BnaCnng26100D, Description = BnaCnng26100D protein, PFAM = PF14570)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00001728ctg015_4997-11948' '(at2g02960 : 198.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G14260.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36822 : 138.0) no description available & (reliability: 396.0) & (original description: Putative ZFP1, Description = E3 ubiquitin-protein ligase MARCH2, PFAM = PF12428;PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00001728ctg015_5006-11963' '(at2g02960 : 196.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G14260.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36822 : 137.0) no description available & (reliability: 392.0) & (original description: Putative ZFP1, Description = E3 ubiquitin-protein ligase MARCH2, PFAM = PF12906;PF12428)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00002137ctg011_8918-14414' '(at5g05830 : 175.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G01070.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative BnaC09g49660D, Description = BnaC09g49660D protein, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00002679ctg007_203-5576' '(at1g71020 : 605.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G23030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q64ha9|spl11_orysa : 402.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 92.2) no description available & (gnl|cdd|39425 : 84.7) no description available & (reliability: 1210.0) & (original description: Putative PUB1, Description = Armadillo/beta-catenin repeat family protein, PFAM = PF04564;PF00514;PF00514)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00003051ctg006_392-6391' '(at4g19670 : 566.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT5G60250.1); Has 3330 Blast hits to 3305 proteins in 225 species: Archae - 1; Bacteria - 6; Metazoa - 1257; Fungi - 660; Plants - 920; Viruses - 0; Other Eukaryotes - 486 (source: NCBI BLink). & (gnl|cdd|37023 : 194.0) no description available & (reliability: 1132.0) & (original description: Putative RTRP3, Description = Reverse transcriptase-like domain-containing RBR protein, PFAM = PF01485;PF13456;PF00097)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00003197ctg010_6474-12871' '(at4g39140 : 236.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G21500.1); Has 1557 Blast hits to 280 proteins in 56 species: Archae - 0; Bacteria - 6; Metazoa - 62; Fungi - 44; Plants - 176; Viruses - 0; Other Eukaryotes - 1269 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative BnaA01g05370D, Description = BnaA01g05370D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00003587ctg004_12756-15586' '(at3g10910 : 140.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G05280.1); Has 8963 Blast hits to 8935 proteins in 281 species: Archae - 0; Bacteria - 6; Metazoa - 2174; Fungi - 625; Plants - 4988; Viruses - 47; Other Eukaryotes - 1123 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative ATL72, Description = RING-H2 finger protein ATL72, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00003862ctg001_12591-15960' '(at3g58030 : 249.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G42030.1). & (gnl|cdd|36041 : 148.0) no description available & (reliability: 498.0) & (original description: Putative RNF5, Description = Zinc finger, C3HC4 type (RING finger) protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00003909ctg000_855-3637' '(at3g61550 : 150.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G46160.1); Has 8101 Blast hits to 8077 proteins in 273 species: Archae - 0; Bacteria - 0; Metazoa - 1969; Fungi - 558; Plants - 4626; Viruses - 27; Other Eukaryotes - 921 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative ATL68, Description = RING-H2 finger protein ATL68, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00004460ctg012_740-3494' '(at5g22000 : 195.0) encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. Double mutant analyses with RHF1a suggests that RHF2a may be involved in targetting ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF2a is expressed in all four floral whorls and is present at ~8-fold higher levels than RHF1a in inflorescences by RT-PCR analyses.; RING-H2 group F2A (RHF2A); FUNCTIONS IN: zinc ion binding; INVOLVED IN: regulation of cell cycle, proteolysis involved in cellular protein catabolic process, megagametogenesis, microgametogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 group F1A (TAIR:AT4G14220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative RHF, Description = E3 ubiquitin-protein ligase RHF2A-like protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00004753ctg000_1-9789' '(at4g34100 : 933.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT4G32670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34782 : 102.0) no description available & (gnl|cdd|36822 : 90.8) no description available & (reliability: 1866.0) & (original description: Putative SUD1, Description = Probable E3 ubiquitin ligase SUD1, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00006158ctg000_1-4468' '(at2g31510 : 234.0) ARIADNE 7 (ARI7); FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G05890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37026 : 130.0) no description available & (reliability: 468.0) & (original description: Putative ARI2, Description = Putative E3 ubiquitin-protein ligase ARI8, PFAM = PF00097)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00006500ctg009_10555-15089' '(at3g14250 : 191.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: egg cell; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G53690.1); Has 3093 Blast hits to 3074 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 1283; Fungi - 653; Plants - 677; Viruses - 1; Other Eukaryotes - 479 (source: NCBI BLink). & (gnl|cdd|37023 : 160.0) no description available & (reliability: 382.0) & (original description: Putative BnaC03g38420D, Description = BnaC03g38420D protein, PFAM = PF01485;PF01485)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00006854ctg000_3653-8551' '(at5g10650 : 231.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G24870.2); Has 11297 Blast hits to 9396 proteins in 312 species: Archae - 0; Bacteria - 114; Metazoa - 2874; Fungi - 769; Plants - 4627; Viruses - 60; Other Eukaryotes - 2853 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative At5g10650, Description = At5g10650, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00007160ctg003_25387-29114' '(at2g22120 : 122.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G11020.1). & (reliability: 244.0) & (original description: Putative At2g22120, Description = Putative E3 ubiquitin-protein ligase MARCH8-like, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00007167ctg004_1-3848' '(at1g53190 : 145.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G15070.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative HIP1, Description = E3 ubiquitin ligase BIG BROTHER-like protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00007712ctg005_20287-22677' '(gnl|cdd|79262 : 186.0) no description available & (p06384|rk16_tobac : 184.0) Chloroplast 50S ribosomal protein L16 - Nicotiana tabacum (Common tobacco) & (atcg00790 : 171.0) chloroplast gene encoding a ribosomal protein L16, which is a constituent of 50S large ribosomal subunit; ribosomal protein L16 (RPL16); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L16 (InterPro:IPR000114), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L16, conserved site (InterPro:IPR020798); BEST Arabidopsis thaliana protein match is: PLANT U-BOX 12 (TAIR:AT2G28830.1). & (gnl|cdd|38632 : 114.0) no description available & (reliability: 312.0) & (original description: Putative rpl16, Description = 50S ribosomal protein L16, chloroplastic, PFAM = PF00252)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00008227ctg003_7639-11360' '(at2g15580 : 109.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 218.0) & (original description: Putative BnaA07g04160D, Description = BnaA07g04160D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00008257ctg048_2201-8543' '(at2g38970 : 763.0) Zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G54780.1); Has 4418 Blast hits to 4397 proteins in 764 species: Archae - 94; Bacteria - 1613; Metazoa - 1251; Fungi - 170; Plants - 535; Viruses - 5; Other Eukaryotes - 750 (source: NCBI BLink). & (gnl|cdd|29239 : 173.0) no description available & (reliability: 1526.0) & (original description: Putative BnaA06g04510D, Description = BnaA06g04510D protein, PFAM = PF14624;PF17123;PF00092)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00009362ctg005_13200-23276' '(at3g62240 : 743.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc ion binding;nucleic acid binding (TAIR:AT2G47090.1); Has 3461 Blast hits to 1592 proteins in 298 species: Archae - 0; Bacteria - 234; Metazoa - 759; Fungi - 420; Plants - 151; Viruses - 4; Other Eukaryotes - 1893 (source: NCBI BLink). & (gnl|cdd|37442 : 338.0) no description available & (gnl|cdd|34833 : 189.0) no description available & (reliability: 1486.0) & (original description: Putative Os05g0279400, Description = Os05g0279400 protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00009417ctg005_1196-6271' '(at5g22920 : 337.0) CHY-type/CTCHY-type/RING-type Zinc finger protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: CHY-type/CTCHY-type/RING-type Zinc finger protein (TAIR:AT5G25560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37151 : 214.0) no description available & (reliability: 674.0) & (original description: Putative MIEL1, Description = E3 ubiquitin-protein ligase MIEL1, PFAM = PF14599;PF05495)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00009820ctg001_847-8236' '(at5g60250 : 426.0) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G25370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37023 : 293.0) no description available & (reliability: 852.0) & (original description: Putative BnaA06g18480D, Description = BnaA06g18480D protein, PFAM = PF01485;PF01485;PF13456)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00010207ctg000_1-5519' '(at5g38895 : 218.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G15790.2). & (reliability: 436.0) & (original description: Putative At3g02290, Description = E3 ubiquitin-protein ligase At3g02290, PFAM = PF12678)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00010491ctg001_6756-14682' '(at4g14220 : 184.0) encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. RHF1a can interact with the cell cycle inhibitor ICK4/KRP6 in vitro. It apppears to target ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF1a is expressed in the carpels throughout floral development. It is expressed in various tissues of the anthers during the early stages of anther development but not in stage 12 flowers and beyond.; RING-H2 group F1A (RHF1A); FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: regulation of cell cycle, proteasomal protein catabolic process, megagametogenesis, microgametogenesis; LOCATED IN: membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 group F2A (TAIR:AT5G22000.3); Has 5179 Blast hits to 4938 proteins in 253 species: Archae - 0; Bacteria - 16; Metazoa - 1752; Fungi - 320; Plants - 2058; Viruses - 9; Other Eukaryotes - 1024 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative Zf, Description = E3 ubiquitin-protein ligase RHF2A-like protein, PFAM = PF12678)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00010686ctg022_5142-9663' '(at2g15530 : 80.5) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34040.1). & (reliability: 161.0) & (original description: Putative , Description = , PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00011315ctg006_9527-18247' '(at3g62970 : 350.0) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: CHY-type/CTCHY-type/RING-type Zinc finger protein (TAIR:AT5G18650.1); Has 819 Blast hits to 814 proteins in 181 species: Archae - 0; Bacteria - 4; Metazoa - 266; Fungi - 146; Plants - 268; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|37151 : 231.0) no description available & (reliability: 700.0) & (original description: Putative RCHY1, Description = RING finger and CHY zinc finger domain-containing protein 1, PFAM = PF14599;PF05495;PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00011395ctg011_7875-9589' '(at1g20823 : 182.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G76410.1); Has 9063 Blast hits to 9039 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 2341; Fungi - 637; Plants - 4964; Viruses - 26; Other Eukaryotes - 1095 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative RING1, Description = E3 ubiquitin ligase, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00011590ctg008_1-8166' '(at5g03450 : 239.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03750.1); Has 6680 Blast hits to 3674 proteins in 290 species: Archae - 4; Bacteria - 114; Metazoa - 3367; Fungi - 525; Plants - 736; Viruses - 186; Other Eukaryotes - 1748 (source: NCBI BLink). & (gnl|cdd|36858 : 102.0) no description available & (reliability: 478.0) & (original description: Putative RFWD3, Description = E3 ubiquitin-protein ligase RFWD3, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00011663ctg003_55599-57620' '(at1g11020 : 164.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT2G22120.2); Has 1259 Blast hits to 1258 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 590; Fungi - 144; Plants - 311; Viruses - 11; Other Eukaryotes - 203 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative ZNF2, Description = Zinc finger family protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00012379ctg002_18068-20413' '(at2g35910 : 117.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G06490.1); Has 8225 Blast hits to 8203 proteins in 288 species: Archae - 0; Bacteria - 0; Metazoa - 1997; Fungi - 507; Plants - 4688; Viruses - 66; Other Eukaryotes - 967 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative ATL67, Description = Putative RING-H2 finger protein ATL71, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00012379ctg002_18081-20425' '(at2g35910 : 116.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G06490.1); Has 8225 Blast hits to 8203 proteins in 288 species: Archae - 0; Bacteria - 0; Metazoa - 1997; Fungi - 507; Plants - 4688; Viruses - 66; Other Eukaryotes - 967 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative ATL67, Description = Putative RING-H2 finger protein ATL71, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00012402ctg000_1029-16562' '(at3g05870 : 147.0) Subunit of the anaphase promoting complex, a ubiquitin ligase complex that regulates progression through the cell cycle.; anaphase-promoting complex/cyclosome 11 (APC11); FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: regulation of mitotic cell cycle; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING-box 1 (TAIR:AT5G20570.1). & (gnl|cdd|36706 : 128.0) no description available & (gnl|cdd|34793 : 89.3) no description available & (reliability: 294.0) & (original description: Putative APC11, Description = Anaphase-promoting complex subunit 11, PFAM = PF12861)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00012434ctg006_5764-10887' '(at1g12760 : 322.0) Zinc finger, C3HC4 type (RING finger) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT1G63170.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 644.0) & (original description: Putative At1g12760, Description = E3 ubiquitin-protein ligase At1g12760, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00012843ctg001_12590-14245' '(at5g42200 : 133.0) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G49220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative ATL23, Description = E3 ubiquitin-protein ligase ATL23, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00013277ctg004_15928-27870' '(at4g28370 : 848.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G20650.2); Has 309 Blast hits to 308 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 74; Fungi - 25; Plants - 165; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|36046 : 580.0) no description available & (reliability: 1696.0) & (original description: Putative At4g28370, Description = At4g28370, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00013311ctg003_2378-10175' '(at2g45530 : 185.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G60580.4); Has 964 Blast hits to 960 proteins in 87 species: Archae - 0; Bacteria - 0; Metazoa - 324; Fungi - 6; Plants - 589; Viruses - 3; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 370.0) & (original description: Putative BnaC08g28030D, Description = BnaC08g28030D protein, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00013323ctg002_3295-5631' '(at3g05200 : 198.0) Encodes a putative RING-H2 zinc finger protein ATL6 (ATL6).; ATL6; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: carbon/nitrogen insensitive 1 (TAIR:AT5G27420.1); Has 9947 Blast hits to 9919 proteins in 286 species: Archae - 0; Bacteria - 0; Metazoa - 2610; Fungi - 790; Plants - 5036; Viruses - 50; Other Eukaryotes - 1461 (source: NCBI BLink). & (gnl|cdd|39828 : 82.4) no description available & (reliability: 396.0) & (original description: Putative ATL6, Description = E3 ubiquitin-protein ligase ATL6, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00013563ctg004_1827-5574' '(at5g54630 : 459.0) zinc finger protein-related; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT4G27240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 918.0) & (original description: Putative mrpi2, Description = C2H2-like zinc finger protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00014744ctg000_8834-15254' '(at4g01270 : 214.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01245.1); Has 5689 Blast hits to 5015 proteins in 477 species: Archae - 145; Bacteria - 387; Metazoa - 2946; Fungi - 366; Plants - 512; Viruses - 10; Other Eukaryotes - 1323 (source: NCBI BLink). & (gnl|cdd|36045 : 113.0) no description available & (reliability: 428.0) & (original description: Putative hip1, Description = A_IG002N01.19 protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00014931ctg005_3116-9518' '(at5g18650 : 414.0) CHY-type/CTCHY-type/RING-type Zinc finger protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G62970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37151 : 238.0) no description available & (reliability: 828.0) & (original description: Putative MIEL1, Description = E3 ubiquitin-protein ligase MIEL1, PFAM = PF13445;PF14599;PF05495)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00015297ctg001_1-2226' '(at5g05810 : 210.0) ATL43; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G20030.1); Has 8903 Blast hits to 8881 proteins in 285 species: Archae - 0; Bacteria - 2; Metazoa - 2283; Fungi - 641; Plants - 4839; Viruses - 72; Other Eukaryotes - 1066 (source: NCBI BLink). & (reliability: 420.0) & (original description: Putative ATL43, Description = RING-H2 finger protein ATL43, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00015551ctg010_10100-14434' '(at3g48070 : 142.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G62910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37279 : 124.0) no description available & (reliability: 284.0) & (original description: Putative BnaCnng26100D, Description = BnaCnng26100D protein, PFAM = PF14570)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00015751ctg003_1-7006' '(at1g74770 : 867.0) zinc ion binding; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Haemerythrin/HHE cation-binding motif (InterPro:IPR012312); BEST Arabidopsis thaliana protein match is: zinc ion binding;zinc ion binding (TAIR:AT1G18910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37151 : 283.0) no description available & (gnl|cdd|69040 : 84.6) no description available & (reliability: 1720.0) & (original description: Putative BTS, Description = Chy and ring finger domain-containing protein, PFAM = PF13639;PF14599;PF05495;PF01814)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00015967ctg030_219-3022' '(at3g29270 : 336.0) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G69330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 672.0) & (original description: Putative Sb01g043230, Description = Putative uncharacterized protein Sb01g043230, PFAM = PF13445)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00016021ctg016_840-3364' '(at1g45976 : 167.0) S-ribonuclease binding protein 1 (SBP1); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: SBP (S-ribonuclease binding protein) family protein (TAIR:AT1G60610.3); Has 1148 Blast hits to 1148 proteins in 158 species: Archae - 2; Bacteria - 4; Metazoa - 532; Fungi - 2; Plants - 446; Viruses - 53; Other Eukaryotes - 109 (source: NCBI BLink). & (gnl|cdd|36316 : 135.0) no description available & (reliability: 334.0) & (original description: Putative sbp1, Description = Putative S-ribonuclease binding protein SBP1, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00016039ctg007_80-2612' '(at5g06490 : 92.8) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G35910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 185.6) & (original description: Putative BnaC03g19770D, Description = BnaC03g19770D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00016101ctg003_1369-7164' '(at2g37150 : 279.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34040.1). & (reliability: 558.0) & (original description: Putative Pspzf, Description = DNA binding zinc finger protein (Pspzf), PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00016257ctg001_52351-55602' '(at1g20823 : 136.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G76410.1); Has 9063 Blast hits to 9039 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 2341; Fungi - 637; Plants - 4964; Viruses - 26; Other Eukaryotes - 1095 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative ATL8, Description = RING-H2 finger protein ATL8, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00016897ctg001_1-7153' '(at5g19430 : 197.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G12310.1). & (reliability: 394.0) & (original description: Putative BnaA03g07590D, Description = BnaA03g07590D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00017024ctg001_9786-16057' '(at5g18650 : 300.0) CHY-type/CTCHY-type/RING-type Zinc finger protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G62970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37151 : 178.0) no description available & (reliability: 600.0) & (original description: Putative RCHY, Description = RING finger and CHY zinc finger domain-containing protein 1, PFAM = PF05495;PF13445)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00017242ctg017_122-3462' '(at3g12920 : 213.0) SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G79110.2); Has 1634 Blast hits to 1631 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 874; Fungi - 0; Plants - 566; Viruses - 36; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|36316 : 167.0) no description available & (reliability: 426.0) & (original description: Putative BRG3, Description = Probable BOI-related E3 ubiquitin-protein ligase 3, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00017386ctg004_4219-8592' '(at5g05830 : 151.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G01070.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative PGSC0003DMG400030428, Description = Zinc finger, RING-CH-type, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00017645ctg002_8275-16538' '(at3g46510 : 804.0) Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. Can be phosphorylated in vitro by MLPK, ARK1, and ARK2 but not by SD1-29.; plant U-box 13 (PUB13); CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: PLANT U-BOX 12 (TAIR:AT2G28830.1); Has 8308 Blast hits to 5676 proteins in 314 species: Archae - 6; Bacteria - 52; Metazoa - 2498; Fungi - 809; Plants - 4013; Viruses - 3; Other Eukaryotes - 927 (source: NCBI BLink). & (q64ha9|spl11_orysa : 619.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 105.0) no description available & (gnl|cdd|39425 : 91.3) no description available & (reliability: 1608.0) & (original description: Putative PUB13, Description = U-box domain-containing protein 13, PFAM = PF05536;PF00514;PF00514;PF00514;PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00017852ctg012_893-4998' '(at1g04360 : 87.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G43420.1); Has 9268 Blast hits to 9239 proteins in 300 species: Archae - 0; Bacteria - 0; Metazoa - 2276; Fungi - 656; Plants - 4907; Viruses - 85; Other Eukaryotes - 1344 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative glysoja_005127, Description = E3 ubiquitin-protein ligase ATL59, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00018837ctg007_1-1868' '(at4g34100 : 199.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT4G32670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative CER9, Description = E3 ubiquitin-protein ligase MARCH6, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00019366ctg000_2697-6037' '(at3g06330 : 147.0) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G18760.1); Has 1679 Blast hits to 1519 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 662; Fungi - 124; Plants - 642; Viruses - 4; Other Eukaryotes - 247 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative RZFP5, Description = Zinc finger protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00019711ctg016_1-2016' '(at5g42940 : 102.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G45180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative glysoja_019579, Description = RING finger protein 165 family, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00020365ctg004_1-4842' '(at4g11680 : 221.0) Zinc finger, C3HC4 type (RING finger) family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT1G12760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative pco071747a, Description = Putative RING zinc finger domain superfamily protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00020377ctg006_1-7411' '(at1g50440 : 346.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G11020.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 692.0) & (original description: Putative BnaA05g15850D, Description = BnaA05g15850D protein, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00020704ctg015_2239-5387' '(at3g46620 : 253.0) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Protein of unknown function DUF1117 (InterPro:IPR010543); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT5G59550.1); Has 8876 Blast hits to 8844 proteins in 271 species: Archae - 0; Bacteria - 6; Metazoa - 2388; Fungi - 760; Plants - 4652; Viruses - 43; Other Eukaryotes - 1027 (source: NCBI BLink). & (gnl|cdd|70034 : 93.2) no description available & (reliability: 506.0) & (original description: Putative BnaC09g34840D, Description = BnaC09g34840D protein, PFAM = PF14369;PF06547;PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00021039ctg000_10645-16128' '(at1g65430 : 616.0) ARIADNE 8 (ARI8); FUNCTIONS IN: ubiquitin-protein ligase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: IBR domain-containing protein (TAIR:AT2G31510.1); Has 2973 Blast hits to 2950 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 1311; Fungi - 559; Plants - 644; Viruses - 3; Other Eukaryotes - 456 (source: NCBI BLink). & (gnl|cdd|37026 : 422.0) no description available & (gnl|cdd|47924 : 80.1) no description available & (reliability: 1232.0) & (original description: Putative ARI8, Description = Probable E3 ubiquitin-protein ligase ARI8, PFAM = PF01485;PF01485)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00021329ctg000_1-6637' '(at3g47990 : 438.0) SUGAR-INSENSITIVE 3 (SIS3); FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: sugar mediated signaling pathway; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G66070.1); Has 9412 Blast hits to 9385 proteins in 270 species: Archae - 0; Bacteria - 0; Metazoa - 2601; Fungi - 698; Plants - 4895; Viruses - 18; Other Eukaryotes - 1200 (source: NCBI BLink). & (reliability: 876.0) & (original description: Putative SIS3, Description = E3 ubiquitin-protein ligase SIS3, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00021331ctg000_7026-11023' '(at5g22000 : 323.0) encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. Double mutant analyses with RHF1a suggests that RHF2a may be involved in targetting ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF2a is expressed in all four floral whorls and is present at ~8-fold higher levels than RHF1a in inflorescences by RT-PCR analyses.; RING-H2 group F2A (RHF2A); FUNCTIONS IN: zinc ion binding; INVOLVED IN: regulation of cell cycle, proteolysis involved in cellular protein catabolic process, megagametogenesis, microgametogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 group F1A (TAIR:AT4G14220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 646.0) & (original description: Putative RHF2A, Description = E3 ubiquitin-protein ligase RHF2A, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00021406ctg007_598-8147' '(at2g44900 : 390.0) ARABIDILLO-1 and its homolog, ARABIDILLO -2, are unique among Arabidopsis Arm-repeat proteins in having an F-box motif and fall into a phylogenetically distinct subgroup from other plant Arm-repeat proteins Similar to arm repeat protein in rice and armadillo/beta-catenin repeat family protein / F-box family protein in Dictyostelium. ARABIDILLO-1 promote lateral root development. Mutant plants form fewer lateral roots, while ARABIDILLO-1-overexpressing lines produce more lateral roots than wild-type seedlings.; ARABIDILLO-1 (ARABIDILLO-1); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: lateral root development; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARABIDILLO-2 (TAIR:AT3G60350.1); Has 10074 Blast hits to 5287 proteins in 284 species: Archae - 0; Bacteria - 24; Metazoa - 4121; Fungi - 736; Plants - 4117; Viruses - 0; Other Eukaryotes - 1076 (source: NCBI BLink). & (reliability: 706.0) & (original description: Putative FBX5, Description = Protein ARABIDILLO 1, PFAM = PF00514;PF00514;PF00514)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00022489ctg001_24517-34311' '(at1g79810 : 462.0) Dominant suppressor of det1 phenotypes. Encodes a peroxisomal protein essential for Arabidopsis growth. Inserted directly from the cytosol into peroxisomes.; REVERSAL OF THE DET PHENOTYPE 3 (TED3); FUNCTIONS IN: zinc ion binding; INVOLVED IN: protein import into peroxisome matrix, fatty acid beta-oxidation, peroxisome organization, photomorphogenesis; LOCATED IN: cytosol, peroxisome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Pex, N-terminal (InterPro:IPR006845), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38090 : 288.0) no description available & (gnl|cdd|68334 : 158.0) no description available & (reliability: 924.0) & (original description: Putative PEX2, Description = Peroxisome biogenesis protein 2, PFAM = PF04757;PF00097)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00023104ctg004_1-4988' '(at2g15580 : 92.4) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 184.8) & (original description: Putative PGSC0003DMG400030735, Description = , PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00023351ctg000_12570-16018' '(at3g12920 : 222.0) SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G79110.2); Has 1634 Blast hits to 1631 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 874; Fungi - 0; Plants - 566; Viruses - 36; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|36316 : 168.0) no description available & (reliability: 444.0) & (original description: Putative BOI, Description = SBP (S-ribonuclease-binding protein) family protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00024104ctg011_52136-55753' '(at3g48070 : 184.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G62910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37279 : 136.0) no description available & (reliability: 368.0) & (original description: Putative RFP1, Description = C4C4-type RING finger protein, PFAM = PF14570)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00024424ctg001_1318-4732' '(at1g68180 : 131.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G56580.3); Has 9058 Blast hits to 9033 proteins in 265 species: Archae - 0; Bacteria - 0; Metazoa - 2534; Fungi - 573; Plants - 4692; Viruses - 31; Other Eukaryotes - 1228 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative KK1_017722, Description = RING finger protein 115 family, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00025512ctg002_29209-36563' '(at4g00990 : 311.0) Transcription factor jumonji (jmjC) domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, RING-type (InterPro:IPR001841), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G11950.1); Has 966 Blast hits to 671 proteins in 113 species: Archae - 0; Bacteria - 8; Metazoa - 538; Fungi - 54; Plants - 301; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36570 : 172.0) no description available & (reliability: 622.0) & (original description: Putative ENBP1, Description = Lysine-specific demethylase 3B, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00026354ctg001_110-5655' '(at2g44950 : 301.0) The gene encodes one of two orthologous E3 ubiquitin ligases in Arabidopsis that are involved in monoubiquitination of histone H2B.; histone mono-ubiquitination 1 (HUB1); FUNCTIONS IN: ubiquitin-protein ligase activity, protein homodimerization activity, zinc ion binding; INVOLVED IN: in 10 processes; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: histone mono-ubiquitination 2 (TAIR:AT1G55250.1); Has 39567 Blast hits to 24086 proteins in 1905 species: Archae - 719; Bacteria - 4806; Metazoa - 20260; Fungi - 3821; Plants - 2415; Viruses - 125; Other Eukaryotes - 7421 (source: NCBI BLink). & (gnl|cdd|36196 : 205.0) no description available & (reliability: 602.0) & (original description: Putative Sb10g028660, Description = Putative uncharacterized protein Sb10g028660, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00026717ctg001_17728-21524' '(at5g65200 : 483.0) Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays.; plant U-box 38 (PUB38); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein with ARM repeat domain (TAIR:AT5G62560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 114.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 966.0) & (original description: Putative PUB38, Description = U-box domain-containing protein 38, PFAM = PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00026922ctg008_1-5783' '(at1g67180 : 196.0) zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: transcription coactivators (TAIR:AT4G02110.1); Has 2482 Blast hits to 2442 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 1048; Fungi - 450; Plants - 465; Viruses - 61; Other Eukaryotes - 458 (source: NCBI BLink). & (gnl|cdd|36043 : 102.0) no description available & (reliability: 392.0) & (original description: Putative Sb02g012355, Description = Putative uncharacterized protein Sb02g012355, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00027294ctg001_17022-25869' '(at5g60580 : 300.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G09760.1); Has 1580 Blast hits to 1234 proteins in 158 species: Archae - 0; Bacteria - 10; Metazoa - 420; Fungi - 112; Plants - 626; Viruses - 18; Other Eukaryotes - 394 (source: NCBI BLink). & (gnl|cdd|36822 : 116.0) no description available & (reliability: 600.0) & (original description: Putative Os06g0677300, Description = Os06g0677300 protein, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00027354ctg000_20613-24297' '(at1g24440 : 318.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G13195.1); Has 869 Blast hits to 869 proteins in 155 species: Archae - 0; Bacteria - 0; Metazoa - 288; Fungi - 71; Plants - 339; Viruses - 31; Other Eukaryotes - 140 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative ubl, Description = E3 ubiquitin ligase, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00027448ctg001_5307-10174' '(at5g55970 : 359.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G26580.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 718.0) & (original description: Putative BnaA10g10110D, Description = BnaA10g10110D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00028389ctg000_26874-38767' '(at4g00990 : 517.0) Transcription factor jumonji (jmjC) domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, RING-type (InterPro:IPR001841), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G11950.1); Has 966 Blast hits to 671 proteins in 113 species: Archae - 0; Bacteria - 8; Metazoa - 538; Fungi - 54; Plants - 301; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36570 : 355.0) no description available & (reliability: 1034.0) & (original description: Putative IBM1, Description = Lysine-specific demethylase 3B, PFAM = PF02373)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00028389ctg000_26893-36521' '(at3g07610 : 469.0) IBM1 likely encodes a protein with histone H3mK9 demethylation activity. It may preferentially demethylate H3mK9 at low-copy loci to protect them from silencing by nearby heterochromatin by preventing the spread of cytosine methylation. BONSAI (At1g73177) is hypermethylated in ibm1 mutants. ibm1 mutants have morphological defects that become apparent at the F3 generation, including small narrow leaves, arrested flower development, and faulty pollen development. These phenotypes cannot result solely from the BONSAI hypermethylation. Aberrant phenotypes in ibm1 mutants in both DNA methylation and plant development can be suppressed by mutations in the KYP H3K9 methyltransferase or he CMT3 non CG-cytosine methylase.; increase in bonsai methylation 1 (IBM1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, histone demethylase activity (H3-K9 specific); INVOLVED IN: flower development, DNA methylation on cytosine, leaf development, pollen development, histone H3-K9 demethylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G11950.1). & (gnl|cdd|36570 : 335.0) no description available & (reliability: 938.0) & (original description: Putative IBM1, Description = Lysine-specific demethylase 3B, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00028455ctg002_163-5080' '(at3g19910 : 177.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G63530.2); Has 15086 Blast hits to 12507 proteins in 429 species: Archae - 8; Bacteria - 555; Metazoa - 4333; Fungi - 1497; Plants - 5032; Viruses - 175; Other Eukaryotes - 3486 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative Sb07g024936, Description = Putative uncharacterized protein Sb07g024936, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00029027ctg002_1-1624' '(at1g49230 : 149.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G49200.1); Has 9168 Blast hits to 9144 proteins in 279 species: Archae - 0; Bacteria - 0; Metazoa - 2452; Fungi - 610; Plants - 4926; Viruses - 41; Other Eukaryotes - 1139 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative ATL10, Description = RING-H2 finger protein ATL1L, PFAM = PF17123)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00030096ctg003_1-816' '(at1g68070 : 87.0) Zinc finger, C3HC4 type (RING finger) family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-finger protein for embryogenesis (TAIR:AT2G01735.1); Has 10060 Blast hits to 10035 proteins in 290 species: Archae - 0; Bacteria - 6; Metazoa - 2675; Fungi - 773; Plants - 5064; Viruses - 53; Other Eukaryotes - 1489 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative PGSC0003DMG400027772, Description = E3 ubiquitin protein ligase RIE1-like protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00030487ctg010_10136-13748' '(at5g42200 : 92.8) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G49220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 185.6) & (original description: Putative PGSC0003DMG400029328, Description = Ring finger protein, putative, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00031561ctg002_1-5776' '(at3g09760 : 391.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G03180.2); Has 1083 Blast hits to 1078 proteins in 125 species: Archae - 0; Bacteria - 2; Metazoa - 334; Fungi - 71; Plants - 602; Viruses - 25; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|36822 : 110.0) no description available & (reliability: 782.0) & (original description: Putative At3g09760, Description = At3g09760/F8A24.19, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00031836ctg008_660-7146' '(at4g03000 : 409.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G03365.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 818.0) & (original description: Putative AIRF1, Description = RING type E3 ligase, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00032772ctg005_20162-22869' '(at5g59550 : 84.3) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Protein of unknown function DUF1117 (InterPro:IPR010543); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G46620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative PGSC0003DMG400018972, Description = E3 ubiquitin-protein ligase RING1-like protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00032956ctg004_2263-5403' '(at4g28890 : 279.0) RING/U-box superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: root stele, root endodermis, hypocotyl, root, primary root differentiation zone; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G20030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 558.0) & (original description: Putative BnaA08g30720D, Description = BnaA08g30720D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00035792ctg002_26366-31328' '(at2g38970 : 494.0) Zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G54780.1); Has 4418 Blast hits to 4397 proteins in 764 species: Archae - 94; Bacteria - 1613; Metazoa - 1251; Fungi - 170; Plants - 535; Viruses - 5; Other Eukaryotes - 750 (source: NCBI BLink). & (gnl|cdd|29239 : 160.0) no description available & (reliability: 988.0) & (original description: Putative RZFP6, Description = C3HC4-type RING finger-containing protein, PFAM = PF17123;PF00092;PF14624)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00036883ctg001_392-2873' '(gnl|cdd|39466 : 95.5) no description available & (at3g09770 : 85.1) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G03200.1); Has 7619 Blast hits to 4715 proteins in 450 species: Archae - 8; Bacteria - 442; Metazoa - 2165; Fungi - 884; Plants - 2938; Viruses - 368; Other Eukaryotes - 814 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative LOG2, Description = E3 ubiquitin-protein ligase MGRN1, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00036939ctg009_13060-14584' '(at5g53110 : 87.8) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G46495.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative PGSC0003DMG400010495, Description = Kinase superfamily protein, putative, PFAM = PF13947)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00037426ctg004_1065-3860' '(at1g71980 : 129.0) Protease-associated (PA) RING/U-box zinc finger family protein; FUNCTIONS IN: peptidase activity, zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: Protease-associated (PA) RING/U-box zinc finger family protein (TAIR:AT1G22670.1); Has 15658 Blast hits to 9675 proteins in 411 species: Archae - 0; Bacteria - 271; Metazoa - 3014; Fungi - 1211; Plants - 4865; Viruses - 29; Other Eukaryotes - 6268 (source: NCBI BLink). & (gnl|cdd|80345 : 118.0) no description available & (gnl|cdd|39828 : 114.0) no description available & (reliability: 258.0) & (original description: Putative RMR1, Description = Receptor homology region, transmembrane domain- and RING domain-containing protein 2, PFAM = PF02225)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00037693ctg000_1339-7088' '(at3g06140 : 240.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G19080.1); Has 7743 Blast hits to 5478 proteins in 376 species: Archae - 2; Bacteria - 144; Metazoa - 2405; Fungi - 531; Plants - 3352; Viruses - 272; Other Eukaryotes - 1037 (source: NCBI BLink). & (gnl|cdd|39466 : 199.0) no description available & (reliability: 480.0) & (original description: Putative LUL2, Description = E3 ubiquitin-protein ligase MGRN1, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00037736ctg013_42159-44528' '(at2g42360 : 131.0) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G42350.1); Has 8862 Blast hits to 8837 proteins in 292 species: Archae - 0; Bacteria - 0; Metazoa - 2202; Fungi - 673; Plants - 4781; Viruses - 60; Other Eukaryotes - 1146 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative ATL41, Description = E3 ubiquitin-protein ligase ATL41, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00039382ctg003_360-4093' '(at5g03450 : 214.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03750.1); Has 6680 Blast hits to 3674 proteins in 290 species: Archae - 4; Bacteria - 114; Metazoa - 3367; Fungi - 525; Plants - 736; Viruses - 186; Other Eukaryotes - 1748 (source: NCBI BLink). & (gnl|cdd|36858 : 132.0) no description available & (reliability: 428.0) & (original description: Putative At5g03450, Description = E3 ubiquitin-protein ligase RFWD3, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00041452ctg000_6545-18795' '(at3g45630 : 351.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|37279 : 221.0) no description available & (gnl|cdd|34774 : 218.0) no description available & (reliability: 702.0) & (original description: Putative NOT4, Description = CCR4-NOT transcription complex subunit 4, PFAM = PF14570;PF00076)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00041547ctg002_8853-23134' '(at3g47990 : 551.0) SUGAR-INSENSITIVE 3 (SIS3); FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: sugar mediated signaling pathway; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G66070.1); Has 9412 Blast hits to 9385 proteins in 270 species: Archae - 0; Bacteria - 0; Metazoa - 2601; Fungi - 698; Plants - 4895; Viruses - 18; Other Eukaryotes - 1200 (source: NCBI BLink). & (reliability: 1102.0) & (original description: Putative SIS3, Description = E3 ubiquitin-protein ligase SIS3, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00042207ctg005_7613-14560' '(at3g16090 : 568.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G65040.2); Has 7341 Blast hits to 7321 proteins in 267 species: Archae - 0; Bacteria - 4; Metazoa - 2254; Fungi - 727; Plants - 3286; Viruses - 21; Other Eukaryotes - 1049 (source: NCBI BLink). & (gnl|cdd|36020 : 249.0) no description available & (gnl|cdd|34840 : 186.0) no description available & (reliability: 1136.0) & (original description: Putative HRD1A, Description = ERAD-associated E3 ubiquitin-protein ligase HRD1A, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00044226ctg005_11202-14777' '(at3g48070 : 182.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G62910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37279 : 137.0) no description available & (reliability: 364.0) & (original description: Putative RFP1, Description = C4C4-type RING finger protein, PFAM = PF14570)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00045597ctg000_1-4410' '(at4g33940 : 216.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box protein with domain of unknown function (DUF 1232) (TAIR:AT1G72175.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37375 : 104.0) no description available & (reliability: 432.0) & (original description: Putative At4g33940, Description = At4g33940, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00046283ctg002_2180-9170' '(at3g47160 : 303.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G58787.1). & (gnl|cdd|36257 : 132.0) no description available & (reliability: 606.0) & (original description: Putative ubl, Description = E3 ubiquitin ligase, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00047135ctg001_351-2467' '(at5g54630 : 176.0) zinc finger protein-related; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT4G27240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative mrpi1, Description = C2H2 zinc finger protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00047353ctg003_24025-27667' '(at4g30400 : 255.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to karrikin; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G18650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 510.0) & (original description: Putative ATL13, Description = RING-H2 finger protein ATL13, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00047882ctg000_7088-10694' '(at2g44410 : 166.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G58030.4); Has 1419 Blast hits to 1419 proteins in 219 species: Archae - 0; Bacteria - 0; Metazoa - 641; Fungi - 147; Plants - 430; Viruses - 10; Other Eukaryotes - 191 (source: NCBI BLink). & (gnl|cdd|36041 : 134.0) no description available & (reliability: 332.0) & (original description: Putative glysoja_031259, Description = E3 ubiquitin-protein ligase RMA2, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00048470ctg001_238-4289' '(at1g29340 : 337.0) Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity. It is required for cell death and full resistance specified by Arabidopsis RPM1 and RPS4 resistance proteins against Pseudomonas syringae pv tomato.; plant U-box 17 (PUB17); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: defense response to fungus, incompatible interaction, defense response, incompatible interaction, apoptosis, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G01830.1); Has 4178 Blast hits to 3456 proteins in 244 species: Archae - 2; Bacteria - 18; Metazoa - 476; Fungi - 388; Plants - 2844; Viruses - 3; Other Eukaryotes - 447 (source: NCBI BLink). & (q64ha9|spl11_orysa : 291.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 98.8) no description available & (gnl|cdd|39425 : 86.7) no description available & (reliability: 674.0) & (original description: Putative PUB1, Description = U-box domain-containing protein 1, PFAM = PF00514;PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00048625ctg005_21832-28756' '(at3g63530 : 201.0) Encodes a novel E3 ubiquitin ligase that acts as a central negative regulator of Arabidopsis floral organ size. Organ size is limited by restricting the period of proliferative growth, rather than the rate of growth and appears to act in a novel pathway, independent of ANT and JAG. Both mRNA and protein are expressed in all actively growing regions of the plant and the vasculature and the protein is rapidly turned over by proteasome-mediated degradation.; BIG BROTHER (BB); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G19910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative BB, Description = E3 ubiquitin ligase BIG BROTHER, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00049376ctg002_54-3307' '(at1g18470 : 171.0) Transmembrane Fragile-X-F-associated protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane Fragile-X-F-associated protein (InterPro:IPR019396); BEST Arabidopsis thaliana protein match is: Transmembrane Fragile-X-F-associated protein (TAIR:AT1G73950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative At1g18470, Description = Transmembrane Fragile-X-F-associated protein, PFAM = PF10269)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00049423ctg001_663-7219' '(at1g68070 : 394.0) Zinc finger, C3HC4 type (RING finger) family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-finger protein for embryogenesis (TAIR:AT2G01735.1); Has 10060 Blast hits to 10035 proteins in 290 species: Archae - 0; Bacteria - 6; Metazoa - 2675; Fungi - 773; Plants - 5064; Viruses - 53; Other Eukaryotes - 1489 (source: NCBI BLink). & (reliability: 788.0) & (original description: Putative RIE1, Description = E3 ubiquitin protein ligase RIE1, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00049478ctg001_1-1030' '(at3g58720 : 109.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G13430.3). & (reliability: 218.0) & (original description: Putative , Description = E3 ubiquitin-protein ligase RNF133 family, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00050473ctg002_27495-34724' '(at2g02960 : 225.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G14260.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36822 : 144.0) no description available & (reliability: 450.0) & (original description: Putative BnaA06g33920D, Description = BnaA06g33920D protein, PFAM = PF12906;PF12428)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00053964ctg000_9836-13210' '(at3g05200 : 165.0) Encodes a putative RING-H2 zinc finger protein ATL6 (ATL6).; ATL6; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: carbon/nitrogen insensitive 1 (TAIR:AT5G27420.1); Has 9947 Blast hits to 9919 proteins in 286 species: Archae - 0; Bacteria - 0; Metazoa - 2610; Fungi - 790; Plants - 5036; Viruses - 50; Other Eukaryotes - 1461 (source: NCBI BLink). & (reliability: 330.0) & (original description: Putative BnaAnng02520D, Description = E3 ubiquitin-protein ligase ATL6, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00054059ctg003_4710-9656' '(at4g34040 : 104.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G15530.3); Has 8873 Blast hits to 7809 proteins in 315 species: Archae - 0; Bacteria - 89; Metazoa - 2441; Fungi - 580; Plants - 3871; Viruses - 41; Other Eukaryotes - 1851 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative glysoja_008758, Description = E3 ubiquitin ligase BIG BROTHER-related, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00055742ctg001_1-1857' '(at1g45976 : 173.0) S-ribonuclease binding protein 1 (SBP1); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: SBP (S-ribonuclease binding protein) family protein (TAIR:AT1G60610.3); Has 1148 Blast hits to 1148 proteins in 158 species: Archae - 2; Bacteria - 4; Metazoa - 532; Fungi - 2; Plants - 446; Viruses - 53; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative sbp1, Description = S-ribonuclease binding protein 1, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00055943ctg000_6924-19318' '(at4g17910 : 356.0) transferases, transferring acyl groups; FUNCTIONS IN: transferase activity, transferring acyl groups; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: GWT1 (InterPro:IPR009447); Has 62 Blast hits to 62 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 21; Plants - 15; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|35632 : 191.0) no description available & (gnl|cdd|34666 : 188.0) no description available & (reliability: 712.0) & (original description: Putative At4g17910, Description = Uncharacterized protein At4g17910, PFAM = PF06423)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00056858ctg000_1-2948' '(at3g05200 : 172.0) Encodes a putative RING-H2 zinc finger protein ATL6 (ATL6).; ATL6; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: carbon/nitrogen insensitive 1 (TAIR:AT5G27420.1); Has 9947 Blast hits to 9919 proteins in 286 species: Archae - 0; Bacteria - 0; Metazoa - 2610; Fungi - 790; Plants - 5036; Viruses - 50; Other Eukaryotes - 1461 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative BnaAnng02520D, Description = RING-H2 finger protein ATL1N, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00057648ctg001_1-9721' '(at2g02960 : 113.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G14260.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative At1g14260, Description = RING/FYVE/PHD zinc finger-containing protein, PFAM = PF12428)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00058787ctg001_4708-7998' '(at1g72200 : 187.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G22500.1); Has 9343 Blast hits to 9316 proteins in 282 species: Archae - 0; Bacteria - 4; Metazoa - 2295; Fungi - 806; Plants - 4899; Viruses - 51; Other Eukaryotes - 1288 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative ATL6, Description = RING-H2 finger protein ATL3B, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben044scf00061533ctg000_1139-3638' '(at3g53690 : 94.4) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G14250.1); Has 3158 Blast hits to 3141 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 1307; Fungi - 709; Plants - 671; Viruses - 0; Other Eukaryotes - 471 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative PGSC0003DMG400034504, Description = , PFAM = PF01485)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101ctg15646_1-4670' '(at2g30580 : 186.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 2 (DRIP2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 1 (TAIR:AT1G06770.1); Has 1631 Blast hits to 1626 proteins in 163 species: Archae - 0; Bacteria - 2; Metazoa - 1227; Fungi - 58; Plants - 232; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative PGSC0003DMG400004205, Description = BnaC04g13880D protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101ctg15741_1822-4983' '(at4g28890 : 321.0) RING/U-box superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: root stele, root endodermis, hypocotyl, root, primary root differentiation zone; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G20030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9lrb7|el5_orysa : 80.1) E3 ubiquitin-protein ligase EL5 (EC 6.3.2.-) - Oryza sativa (Rice) & (reliability: 642.0) & (original description: Putative ATL42, Description = E3 ubiquitin-protein ligase ATL42, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00022_22615-31645' '(at2g26350 : 530.0) Zinc-binding peroxisomal integral membrane protein (PEX10). Inserted directly from the cytosol into peroxisomes and is involved in importing proteins into the peroxisome. Required for embryogenesis.; peroxin 10 (PEX10); FUNCTIONS IN: zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, peroxisome; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Pex, N-terminal (InterPro:IPR006845), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING membrane-anchor 1 (TAIR:AT4G03510.2); Has 4616 Blast hits to 4603 proteins in 297 species: Archae - 0; Bacteria - 0; Metazoa - 2406; Fungi - 531; Plants - 966; Viruses - 101; Other Eukaryotes - 612 (source: NCBI BLink). & (gnl|cdd|35538 : 219.0) no description available & (gnl|cdd|68334 : 118.0) no description available & (reliability: 1060.0) & (original description: Putative PEX10, Description = Peroxisome biogenesis factor 10, PFAM = PF04757;PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00033_713739-720383' '(at5g08750 : 355.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G63780.1); Has 309 Blast hits to 307 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 307; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 710.0) & (original description: Putative SHA1, Description = At5g63780, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00046_329318-335804' '(at5g14420 : 559.0) RING domain ligase2 (RGLG2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Copine (InterPro:IPR010734), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: RING domain ligase1 (TAIR:AT3G01650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36541 : 330.0) no description available & (gnl|cdd|29232 : 273.0) no description available & (reliability: 1118.0) & (original description: Putative RGLG2, Description = E3 ubiquitin-protein ligase RGLG2, PFAM = PF07002;PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00046_951656-955498' '(at5g40720 : 583.0) CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G27330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85620 : 127.0) no description available & (reliability: 1138.0) & (original description: Putative RCOM_0530710, Description = Glycosyltransferase family 92 protein RCOM_0530710, PFAM = PF01697)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00046_954985-959108' '(at3g27330 : 169.0) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF23) (TAIR:AT5G40720.1); Has 9172 Blast hits to 9085 proteins in 2351 species: Archae - 0; Bacteria - 208; Metazoa - 7155; Fungi - 537; Plants - 665; Viruses - 17; Other Eukaryotes - 590 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative Sb02g043730, Description = Putative uncharacterized protein Sb02g043730, PFAM = PF00097)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00058_306778-313214' '(at4g03000 : 427.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G03365.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 854.0) & (original description: Putative AIRF1, Description = RING type E3 ligase, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00063_1379651-1382734' '(at3g47550 : 90.1) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to salt stress; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G62460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative At1g14260, Description = Membrane associated ring finger 1,8, putative, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00073_372015-376329' '(at1g29340 : 830.0) Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity. It is required for cell death and full resistance specified by Arabidopsis RPM1 and RPS4 resistance proteins against Pseudomonas syringae pv tomato.; plant U-box 17 (PUB17); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: defense response to fungus, incompatible interaction, defense response, incompatible interaction, apoptosis, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G01830.1); Has 4178 Blast hits to 3456 proteins in 244 species: Archae - 2; Bacteria - 18; Metazoa - 476; Fungi - 388; Plants - 2844; Viruses - 3; Other Eukaryotes - 447 (source: NCBI BLink). & (q64ha9|spl11_orysa : 252.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 103.0) no description available & (reliability: 1660.0) & (original description: Putative PUB17, Description = U-box domain-containing protein 17, PFAM = PF00514;PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00095_901219-903656' '(at2g04240 : 134.0) Encodes a small protein with an N-terminal trans-membrane domain and a RING-H2 zinc finger motif located at the C-terminus. Gene expression is induced by salt and osmotic stress. Transcrips levels are induced by DELLA proteins and repressed by gibberellic acid. Involved in ABA metabolism.; XERICO; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: brassinosteroid-responsive RING-H2 (TAIR:AT3G61460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative XERICO, Description = Probable E3 ubiquitin-protein ligase XERICO, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00099_57603-67013' '(at5g22000 : 199.0) encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. Double mutant analyses with RHF1a suggests that RHF2a may be involved in targetting ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF2a is expressed in all four floral whorls and is present at ~8-fold higher levels than RHF1a in inflorescences by RT-PCR analyses.; RING-H2 group F2A (RHF2A); FUNCTIONS IN: zinc ion binding; INVOLVED IN: regulation of cell cycle, proteolysis involved in cellular protein catabolic process, megagametogenesis, microgametogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 group F1A (TAIR:AT4G14220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative RHF, Description = E3 ubiquitin-protein ligase RHF2A, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00103_35392-37928' '(at3g10910 : 120.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G05280.1); Has 8963 Blast hits to 8935 proteins in 281 species: Archae - 0; Bacteria - 6; Metazoa - 2174; Fungi - 625; Plants - 4988; Viruses - 47; Other Eukaryotes - 1123 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative ATL8, Description = RING-H2 finger protein ATL1L, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00107_37011-42902' '(at2g15530 : 254.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34040.1). & (reliability: 508.0) & (original description: Putative ZFP1, Description = C3HC4-type RING finger protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00116_395044-399655' '(at1g61620 : 421.0) phosphoinositide binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Nitric oxide synthase-interacting (InterPro:IPR016818), Zinc finger, RING-type (InterPro:IPR001841); Has 510 Blast hits to 510 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 167; Fungi - 129; Plants - 138; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|38249 : 357.0) no description available & (reliability: 842.0) & (original description: Putative PGSC0003DMG400022347, Description = Nitric oxide synthase-interacting protein homolog, PFAM = PF04641;PF15906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00146_137928-142873' '(at5g65200 : 439.0) Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays.; plant U-box 38 (PUB38); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein with ARM repeat domain (TAIR:AT5G62560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 106.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 878.0) & (original description: Putative PUB38, Description = U-box domain-containing protein 38, PFAM = PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00149_75426-85730' '(at5g01450 : 315.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G38185.2); Has 1494 Blast hits to 1490 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 838; Fungi - 48; Plants - 298; Viruses - 88; Other Eukaryotes - 222 (source: NCBI BLink). & (gnl|cdd|39476 : 102.0) no description available & (reliability: 630.0) & (original description: Putative BnaA03g17640D, Description = BnaA03g17640D protein, PFAM = PF16041;PF13920;PF16040)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00176_487068-490719' '(at5g54630 : 456.0) zinc finger protein-related; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT4G27240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 912.0) & (original description: Putative mrpi2, Description = C2H2-like zinc finger protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00177_411570-416465' '(at3g07360 : 422.0) The protein that is predicted to be encoded by this gene model lacks the U-box domain identified in the AT3G07360.1 gene model.; plant U-box 9 (PUB9); CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G18320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q64ha9|spl11_orysa : 225.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 95.3) no description available & (reliability: 844.0) & (original description: Putative PUB9, Description = U-box domain-containing protein 9, PFAM = PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00189_692234-703212' '(at4g01020 : 1847.0) helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related; FUNCTIONS IN: in 6 functions; LOCATED IN: intracellular, chloroplast; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, RING-type, conserved site (InterPro:IPR017907), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), K Homology (InterPro:IPR004087), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, C2H2-type (InterPro:IPR007087), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related (TAIR:AT5G10370.1); Has 13197 Blast hits to 12409 proteins in 1676 species: Archae - 4; Bacteria - 3384; Metazoa - 3503; Fungi - 1989; Plants - 1444; Viruses - 760; Other Eukaryotes - 2113 (source: NCBI BLink). & (gnl|cdd|36140 : 624.0) no description available & (gnl|cdd|31829 : 477.0) no description available & (reliability: 3664.0) & (original description: Putative At4g01020, Description = ATP-dependent RNA helicase DEAH11, chloroplastic, PFAM = PF00271;PF01485;PF04408;PF00270)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00220_173380-182503' '(at1g79810 : 412.0) Dominant suppressor of det1 phenotypes. Encodes a peroxisomal protein essential for Arabidopsis growth. Inserted directly from the cytosol into peroxisomes.; REVERSAL OF THE DET PHENOTYPE 3 (TED3); FUNCTIONS IN: zinc ion binding; INVOLVED IN: protein import into peroxisome matrix, fatty acid beta-oxidation, peroxisome organization, photomorphogenesis; LOCATED IN: cytosol, peroxisome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Pex, N-terminal (InterPro:IPR006845), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38090 : 244.0) no description available & (gnl|cdd|68334 : 155.0) no description available & (reliability: 824.0) & (original description: Putative PEX2, Description = Peroxisome biogenesis protein 2, PFAM = PF04757)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00240_140671-143438' '(at1g53820 : 125.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G72310.1); Has 9301 Blast hits to 9282 proteins in 297 species: Archae - 0; Bacteria - 0; Metazoa - 2391; Fungi - 736; Plants - 4843; Viruses - 80; Other Eukaryotes - 1251 (source: NCBI BLink). & (q9lrb7|el5_orysa : 85.1) E3 ubiquitin-protein ligase EL5 (EC 6.3.2.-) - Oryza sativa (Rice) & (reliability: 250.0) & (original description: Putative ACRE132, Description = Avr9/Cf-9 rapidly elicited protein 132, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00245_493486-502642' '(at3g47550 : 214.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to salt stress; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G62460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36822 : 156.0) no description available & (reliability: 428.0) & (original description: Putative ZFP1, Description = Zinc finger protein, PFAM = PF12906;PF12428)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00247_643723-653490' '(at3g62970 : 350.0) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: CHY-type/CTCHY-type/RING-type Zinc finger protein (TAIR:AT5G18650.1); Has 819 Blast hits to 814 proteins in 181 species: Archae - 0; Bacteria - 4; Metazoa - 266; Fungi - 146; Plants - 268; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|37151 : 232.0) no description available & (reliability: 700.0) & (original description: Putative MIEL1, Description = E3 ubiquitin-protein ligase MIEL1, PFAM = PF05495;PF14599;PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00271_412319-423057' '(at2g38970 : 483.0) Zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G54780.1); Has 4418 Blast hits to 4397 proteins in 764 species: Archae - 94; Bacteria - 1613; Metazoa - 1251; Fungi - 170; Plants - 535; Viruses - 5; Other Eukaryotes - 750 (source: NCBI BLink). & (gnl|cdd|29239 : 160.0) no description available & (reliability: 966.0) & (original description: Putative RZFP6, Description = C3HC4 type zinc finger protein, PFAM = PF00092;PF14624;PF17123)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00272_816012-822996' '(at2g02960 : 247.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G14260.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36822 : 144.0) no description available & (reliability: 494.0) & (original description: Putative BnaA06g33920D, Description = BnaA06g33920D protein, PFAM = PF12428;PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00293_703207-716007' '(at3g62240 : 559.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc ion binding;nucleic acid binding (TAIR:AT2G47090.1); Has 3461 Blast hits to 1592 proteins in 298 species: Archae - 0; Bacteria - 234; Metazoa - 759; Fungi - 420; Plants - 151; Viruses - 4; Other Eukaryotes - 1893 (source: NCBI BLink). & (gnl|cdd|37442 : 322.0) no description available & (gnl|cdd|34833 : 185.0) no description available & (reliability: 1118.0) & (original description: Putative Os05g0279400, Description = Os05g0279400 protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00305_127793-134355' '(at4g36550 : 317.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G67530.2); Has 2348 Blast hits to 2266 proteins in 141 species: Archae - 0; Bacteria - 20; Metazoa - 120; Fungi - 34; Plants - 2017; Viruses - 3; Other Eukaryotes - 154 (source: NCBI BLink). & (q64ha9|spl11_orysa : 96.3) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 90.3) no description available & (reliability: 634.0) & (original description: Putative bg55, Description = Bg55 protein, PFAM = PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00321_558380-561036' '(at2g23780 : 193.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G19310.1); Has 3846 Blast hits to 3838 proteins in 274 species: Archae - 0; Bacteria - 0; Metazoa - 2175; Fungi - 493; Plants - 714; Viruses - 21; Other Eukaryotes - 443 (source: NCBI BLink). & (gnl|cdd|36041 : 134.0) no description available & (reliability: 386.0) & (original description: Putative AIR1, Description = RING type E3 ligase AIR1, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00351_38025-41182' '(at4g37880 : 446.0) LisH/CRA/RING-U-box domains-containing protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein, CRA domain (InterPro:IPR019589), Zinc finger, RING-type (InterPro:IPR001841), CTLH, C-terminal LisH motif (InterPro:IPR006595), LisH dimerisation motif (InterPro:IPR006594), Ran binding protein-like, CRA domain (InterPro:IPR013144); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT2G22690.2); Has 833 Blast hits to 829 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 364; Fungi - 234; Plants - 138; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|38028 : 393.0) no description available & (gnl|cdd|34712 : 147.0) no description available & (reliability: 892.0) & (original description: Putative SIE3, Description = SIE3, PFAM = PF10607;PF13445)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00351_43190-47511' '(at5g49665 : 456.0) Zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Zinc finger (C3HC4-type RING finger) family protein (TAIR:AT2G22680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29239 : 151.0) no description available & (reliability: 912.0) & (original description: Putative WAV3, Description = At5g49665, PFAM = PF17123;PF00092)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00352_260839-270667' '(at1g26800 : 149.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G14200.1); Has 9899 Blast hits to 9869 proteins in 270 species: Archae - 0; Bacteria - 0; Metazoa - 2681; Fungi - 828; Plants - 5098; Viruses - 14; Other Eukaryotes - 1278 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative RING1, Description = E3 ubiquitin-protein ligase, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00361_539863-552978' '(at2g26350 : 512.0) Zinc-binding peroxisomal integral membrane protein (PEX10). Inserted directly from the cytosol into peroxisomes and is involved in importing proteins into the peroxisome. Required for embryogenesis.; peroxin 10 (PEX10); FUNCTIONS IN: zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, peroxisome; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Pex, N-terminal (InterPro:IPR006845), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING membrane-anchor 1 (TAIR:AT4G03510.2); Has 4616 Blast hits to 4603 proteins in 297 species: Archae - 0; Bacteria - 0; Metazoa - 2406; Fungi - 531; Plants - 966; Viruses - 101; Other Eukaryotes - 612 (source: NCBI BLink). & (gnl|cdd|35538 : 222.0) no description available & (gnl|cdd|68334 : 121.0) no description available & (reliability: 1024.0) & (original description: Putative BnaAnng35490D, Description = BnaAnng35490D protein, PFAM = PF04757;PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00369_1120877-1131623' '(at3g05545 : 252.0) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, PHD-type (InterPro:IPR001965); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G47700.1); Has 1560 Blast hits to 1269 proteins in 195 species: Archae - 0; Bacteria - 91; Metazoa - 627; Fungi - 277; Plants - 288; Viruses - 4; Other Eukaryotes - 273 (source: NCBI BLink). & (reliability: 504.0) & (original description: Putative BnaC05g46260D, Description = BnaC05g46260D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00370_29523-32830' '(at3g05200 : 142.0) Encodes a putative RING-H2 zinc finger protein ATL6 (ATL6).; ATL6; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: carbon/nitrogen insensitive 1 (TAIR:AT5G27420.1); Has 9947 Blast hits to 9919 proteins in 286 species: Archae - 0; Bacteria - 0; Metazoa - 2610; Fungi - 790; Plants - 5036; Viruses - 50; Other Eukaryotes - 1461 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative ATL6, Description = E3 ubiquitin-protein ligase ATL6, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00370_369512-375744' '(at3g05250 : 263.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); Has 547 Blast hits to 545 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 229; Fungi - 32; Plants - 178; Viruses - 65; Other Eukaryotes - 43 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative BnaC05g46520D, Description = BnaC05g46520D protein, PFAM = PF00097)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00378_200588-205212' '(at2g15530 : 115.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34040.1). & (reliability: 230.0) & (original description: Putative BnaCnng39930D, Description = E3 ubiquitin ligase BIG BROTHER-related, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00381_509375-512256' '(at1g20823 : 144.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G76410.1); Has 9063 Blast hits to 9039 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 2341; Fungi - 637; Plants - 4964; Viruses - 26; Other Eukaryotes - 1095 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative ATL80, Description = RING-H2 finger protein ATL80, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00398_723172-730251' '(at1g53190 : 201.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G15070.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative HIP1, Description = E3 ubiquitin ligase BIG BROTHER-related-like protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00415_577688-587339' '(at5g43420 : 251.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G04360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 502.0) & (original description: Putative ATL1, Description = RING-H2 finger protein ATL1, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00425_143372-147056' '(at5g62910 : 171.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G48070.2); Has 749 Blast hits to 665 proteins in 188 species: Archae - 0; Bacteria - 6; Metazoa - 241; Fungi - 216; Plants - 135; Viruses - 4; Other Eukaryotes - 147 (source: NCBI BLink). & (gnl|cdd|37279 : 144.0) no description available & (reliability: 342.0) & (original description: Putative RFP1, Description = C4C4-type RING finger protein, PFAM = PF14570)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00435_169292-172508' '(at3g20395 : 125.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G66070.1); Has 9570 Blast hits to 9551 proteins in 280 species: Archae - 0; Bacteria - 6; Metazoa - 2563; Fungi - 715; Plants - 4921; Viruses - 21; Other Eukaryotes - 1344 (source: NCBI BLink). & (gnl|cdd|39828 : 83.5) no description available & (reliability: 228.0) & (original description: Putative At3g20395, Description = RING-finger domain-containing protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00442_1066124-1069212' '(at5g17600 : 148.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G03550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative ATL54, Description = RING-H2 finger protein ATL54, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00468_168878-172724' '(at1g10650 : 252.0) SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: SBP (S-ribonuclease binding protein) family protein (TAIR:AT1G60610.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36316 : 160.0) no description available & (reliability: 504.0) & (original description: Putative At1g10650, Description = Putative S-ribonuclease binding protein SBP1, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00494_487540-498918' '(at1g71980 : 429.0) Protease-associated (PA) RING/U-box zinc finger family protein; FUNCTIONS IN: peptidase activity, zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: Protease-associated (PA) RING/U-box zinc finger family protein (TAIR:AT1G22670.1); Has 15658 Blast hits to 9675 proteins in 411 species: Archae - 0; Bacteria - 271; Metazoa - 3014; Fungi - 1211; Plants - 4865; Viruses - 29; Other Eukaryotes - 6268 (source: NCBI BLink). & (gnl|cdd|39828 : 319.0) no description available & (gnl|cdd|80345 : 155.0) no description available & (reliability: 858.0) & (original description: Putative RMR2, Description = Receptor homology region, transmembrane domain- and RING domain-containing protein 2, PFAM = PF02225;PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00535_51840-55033' '(at3g46620 : 207.0) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Protein of unknown function DUF1117 (InterPro:IPR010543); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT5G59550.1); Has 8876 Blast hits to 8844 proteins in 271 species: Archae - 0; Bacteria - 6; Metazoa - 2388; Fungi - 760; Plants - 4652; Viruses - 43; Other Eukaryotes - 1027 (source: NCBI BLink). & (gnl|cdd|70034 : 86.3) no description available & (reliability: 414.0) & (original description: Putative Sb09g001100, Description = Putative uncharacterized protein Sb09g001100, PFAM = PF06547;PF13639;PF14369)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00539_479526-482009' '(at5g42200 : 137.0) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G49220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative ATL23, Description = E3 ubiquitin-protein ligase ATL23, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00571_636961-652935' '(at3g08505 : 294.0) zinc finger (CCCH-type/C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36257 : 125.0) no description available & (reliability: 588.0) & (original description: Putative BnaA03g30350D, Description = BnaA03g30350D protein, PFAM = PF15663;PF00097)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00571_637928-652848' '(at3g08505 : 288.0) zinc finger (CCCH-type/C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36257 : 123.0) no description available & (reliability: 576.0) & (original description: Putative BnaA03g30350D, Description = BnaA03g30350D protein, PFAM = PF00642;PF00097)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00574_442513-445313' '(at1g69330 : 258.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G29270.2); Has 288 Blast hits to 287 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 134; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 516.0) & (original description: Putative Sb01g043230, Description = Putative uncharacterized protein Sb01g043230, PFAM = PF13445)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00592_772506-778277' '(at2g17730 : 276.0) Intrinsic thylakoid membrane protein that fixes RPOTmp on the stromal side of the thylakoid membrane.; NEP-interacting protein 2 (NIP2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G35840.1). & (reliability: 552.0) & (original description: Putative nip, Description = NEP1-interacting protein, PFAM = PF13639;PF13441)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00592_1615993-1618627' '(at1g20823 : 144.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G76410.1); Has 9063 Blast hits to 9039 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 2341; Fungi - 637; Plants - 4964; Viruses - 26; Other Eukaryotes - 1095 (source: NCBI BLink). & (gnl|cdd|39828 : 81.2) no description available & (reliability: 288.0) & (original description: Putative ATL44, Description = Probable E3 ubiquitin-protein ligase ATL44, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00603_423978-431923' '(at4g11680 : 374.0) Zinc finger, C3HC4 type (RING finger) family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT1G12760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 748.0) & (original description: Putative At4g11680, Description = E3 ubiquitin-protein ligase At4g11680, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00635_203529-206308' '(at3g29270 : 213.0) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G69330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative PGSC0003DMG400028383, Description = RING zinc finger protein, putative, expressed, PFAM = PF13445)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00644_160227-165303' '(at1g73760 : 222.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G17970.1); Has 8524 Blast hits to 8508 proteins in 269 species: Archae - 0; Bacteria - 6; Metazoa - 2401; Fungi - 632; Plants - 4276; Viruses - 14; Other Eukaryotes - 1195 (source: NCBI BLink). & (reliability: 444.0) & (original description: Putative BnaC08g17670D, Description = BnaC08g17670D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00662_69119-73238' '(at2g38185 : 122.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G38220.1). & (reliability: 228.0) & (original description: Putative TCM_034755, Description = RING/U-box superfamily protein isoform 2, PFAM = PF16040;PF13920;PF16041)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00689_63282-67426' '(at4g35840 : 325.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: NEP-interacting protein 2 (TAIR:AT2G17730.1); Has 8964 Blast hits to 8940 proteins in 268 species: Archae - 0; Bacteria - 2; Metazoa - 2132; Fungi - 649; Plants - 5031; Viruses - 28; Other Eukaryotes - 1122 (source: NCBI BLink). & (reliability: 650.0) & (original description: Putative NIP1, Description = NEP1-interacting protein 1, PFAM = PF13436;PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00712_587638-590204' '(at1g76410 : 126.0) ATL8; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G20823.1); Has 9001 Blast hits to 8977 proteins in 267 species: Archae - 0; Bacteria - 0; Metazoa - 2299; Fungi - 634; Plants - 4930; Viruses - 29; Other Eukaryotes - 1109 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative RING1, Description = E3 ubiquitin ligase, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00712_794399-799377' '(at1g20780 : 975.0) Encodes a protein containing a U-box and an ARM domain.; senescence-associated E3 ubiquitin ligase 1 (SAUL1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of chlorophyll catabolic process, regulation of chlorophyll biosynthetic process, leaf senescence, regulation of abscisic acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G76390.2); Has 2790 Blast hits to 2660 proteins in 201 species: Archae - 0; Bacteria - 20; Metazoa - 434; Fungi - 161; Plants - 1969; Viruses - 3; Other Eukaryotes - 203 (source: NCBI BLink). & (reliability: 1940.0) & (original description: Putative PUB43, Description = U-box domain-containing protein 43, PFAM = PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00725_430912-452410' '(at1g73950 : 660.0) Transmembrane Fragile-X-F-associated protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane Fragile-X-F-associated protein (InterPro:IPR019396), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Transmembrane Fragile-X-F-associated protein (TAIR:AT1G18470.1); Has 2761 Blast hits to 2652 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 1645; Fungi - 8; Plants - 510; Viruses - 253; Other Eukaryotes - 345 (source: NCBI BLink). & (reliability: 1320.0) & (original description: Putative Sb01g010680, Description = Putative uncharacterized protein Sb01g010680, PFAM = PF10269;PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00725_443350-446323' '(at1g18470 : 253.0) Transmembrane Fragile-X-F-associated protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane Fragile-X-F-associated protein (InterPro:IPR019396); BEST Arabidopsis thaliana protein match is: Transmembrane Fragile-X-F-associated protein (TAIR:AT1G73950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative At1g18470, Description = Transmembrane Fragile-X-F-associated protein, PFAM = PF10269)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00730_49059-51895' '(at2g29660 : 84.3) zinc finger (C2H2 type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein-related (TAIR:AT5G54630.1); Has 407 Blast hits to 407 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 28; Plants - 376; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00742_207547-214963' '(at1g09060 : 914.0) Zinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, RING-type (InterPro:IPR001841), Transcription factor jumonji (InterPro:IPR013129), WRC (InterPro:IPR014977), Cell division cycle-associated protein (InterPro:IPR018866); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT4G00990.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36570 : 244.0) no description available & (reliability: 1828.0) & (original description: Putative At1g09060, Description = WRC, zf-4CXXC-R1 transcription factor and jumonji domain-containing protein, PFAM = PF02373;PF08879)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00773_420376-422957' '(at3g10910 : 128.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G05280.1); Has 8963 Blast hits to 8935 proteins in 281 species: Archae - 0; Bacteria - 6; Metazoa - 2174; Fungi - 625; Plants - 4988; Viruses - 47; Other Eukaryotes - 1123 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative ATL73, Description = RING-H2 finger protein ATL73, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00777_188116-198047' '(at4g32600 : 310.0) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: protein binding, zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT1G80400.1); Has 7180 Blast hits to 7160 proteins in 223 species: Archae - 0; Bacteria - 6; Metazoa - 2398; Fungi - 545; Plants - 2870; Viruses - 33; Other Eukaryotes - 1328 (source: NCBI BLink). & (reliability: 620.0) & (original description: Putative Os05g0179000, Description = Os05g0179000 protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00782_47708-50193' '(at2g35910 : 100.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G06490.1); Has 8225 Blast hits to 8203 proteins in 288 species: Archae - 0; Bacteria - 0; Metazoa - 1997; Fungi - 507; Plants - 4688; Viruses - 66; Other Eukaryotes - 967 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative RCOM_0421540, Description = Ring finger protein, putative, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00802_13151-17196' '(at1g60190 : 501.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding, zinc ion binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 18 (TAIR:AT1G10560.1); Has 2852 Blast hits to 2737 proteins in 198 species: Archae - 2; Bacteria - 22; Metazoa - 274; Fungi - 109; Plants - 2200; Viruses - 3; Other Eukaryotes - 242 (source: NCBI BLink). & (q64ha9|spl11_orysa : 251.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 90.3) no description available & (reliability: 1002.0) & (original description: Putative glysoja_006880, Description = U-box domain-containing protein 19, PFAM = PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00807_11241-13648' '(at5g42200 : 116.0) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G49220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative ATL23, Description = RING-H2 finger protein ATL5J, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00812_231375-237526' '(at3g63530 : 112.0) Encodes a novel E3 ubiquitin ligase that acts as a central negative regulator of Arabidopsis floral organ size. Organ size is limited by restricting the period of proliferative growth, rather than the rate of growth and appears to act in a novel pathway, independent of ANT and JAG. Both mRNA and protein are expressed in all actively growing regions of the plant and the vasculature and the protein is rapidly turned over by proteasome-mediated degradation.; BIG BROTHER (BB); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G19910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative Sb02g030410, Description = Putative uncharacterized protein Sb02g030410, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00813_58528-74383' '(at3g63530 : 195.0) Encodes a novel E3 ubiquitin ligase that acts as a central negative regulator of Arabidopsis floral organ size. Organ size is limited by restricting the period of proliferative growth, rather than the rate of growth and appears to act in a novel pathway, independent of ANT and JAG. Both mRNA and protein are expressed in all actively growing regions of the plant and the vasculature and the protein is rapidly turned over by proteasome-mediated degradation.; BIG BROTHER (BB); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G19910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative NP8, Description = Integrins alpha chain family protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00858_36366-40370' '(at5g54630 : 487.0) zinc finger protein-related; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT4G27240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 974.0) & (original description: Putative mrpi2, Description = C2H2-like zinc finger protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00870_220474-223385' '(at1g53820 : 122.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G72310.1); Has 9301 Blast hits to 9282 proteins in 297 species: Archae - 0; Bacteria - 0; Metazoa - 2391; Fungi - 736; Plants - 4843; Viruses - 80; Other Eukaryotes - 1251 (source: NCBI BLink). & (q9lrb7|el5_orysa : 86.3) E3 ubiquitin-protein ligase EL5 (EC 6.3.2.-) - Oryza sativa (Rice) & (reliability: 244.0) & (original description: Putative ACRE132, Description = Avr9/Cf-9 rapidly elicited protein 132, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00973_50691-57991' '(at3g14250 : 161.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: egg cell; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G53690.1); Has 3093 Blast hits to 3074 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 1283; Fungi - 653; Plants - 677; Viruses - 1; Other Eukaryotes - 479 (source: NCBI BLink). & (gnl|cdd|37023 : 128.0) no description available & (reliability: 322.0) & (original description: Putative PGSC0003DMG400030956, Description = RING/U-box superfamily protein, putative isoform 1, PFAM = PF01485)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf00973_149084-153909' '(at3g14250 : 166.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: egg cell; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G53690.1); Has 3093 Blast hits to 3074 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 1283; Fungi - 653; Plants - 677; Viruses - 1; Other Eukaryotes - 479 (source: NCBI BLink). & (gnl|cdd|37023 : 133.0) no description available & (reliability: 332.0) & (original description: Putative PGSC0003DMG400030956, Description = Zinc finger protein, putative, PFAM = PF01485;PF01485)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01001_439730-446345' '(at5g12310 : 206.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G19430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative BnaA03g07590D, Description = BnaA03g07590D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01008_161628-172245' '(at5g44280 : 256.0) Encodes a nuclear localized protein with similarity to animal polycomb repressive core complex1 (PRC1) core component RING.Appears to function redundantly with ATRING1b, a close paralog. Both interact physically with CLF and LHP1 and appear to function together to repress class I KNOX gene expression.; RING 1A (RING1A); FUNCTIONS IN: zinc ion binding; INVOLVED IN: negative regulation of gene expression, epigenetic; LOCATED IN: nucleus, PRC1 complex; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: RING 1B (TAIR:AT1G03770.1); Has 9014 Blast hits to 7495 proteins in 568 species: Archae - 41; Bacteria - 677; Metazoa - 3346; Fungi - 1171; Plants - 610; Viruses - 87; Other Eukaryotes - 3082 (source: NCBI BLink). & (gnl|cdd|35532 : 167.0) no description available & (reliability: 512.0) & (original description: Putative RING1B, Description = Putative E3 ubiquitin-protein ligase RING1b, PFAM = PF13923)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01018_909728-912603' '(at3g25030 : 135.0) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G13100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative ZFL, Description = Zinc finger-like protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01026_245056-250880' '(at1g30860 : 138.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: stem, stamen, pollen tube; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G34920.1); Has 4912 Blast hits to 4241 proteins in 362 species: Archae - 9; Bacteria - 172; Metazoa - 2090; Fungi - 292; Plants - 512; Viruses - 97; Other Eukaryotes - 1740 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative PGSC0003DMG400011288, Description = Putative ovule protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01036_351900-354649' '(at4g27470 : 142.0) Encodes a RING finger E3 ubiquitin ligase.; RING membrane-anchor 3 (RMA3); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING membrane-anchor 1 (TAIR:AT4G03510.2); Has 2828 Blast hits to 2826 proteins in 265 species: Archae - 0; Bacteria - 0; Metazoa - 1348; Fungi - 459; Plants - 695; Viruses - 22; Other Eukaryotes - 304 (source: NCBI BLink). & (gnl|cdd|36041 : 139.0) no description available & (reliability: 284.0) & (original description: Putative MKB1, Description = MAKIBISHI 1, PFAM = PF00097)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01072_74568-91354' '(at2g26000 : 530.0) BRAP2 RING ZnF UBP domain-containing protein 2 (BRIZ2); FUNCTIONS IN: catalytic activity, zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: BRCA1-associated 2 (InterPro:IPR011422), Zinc finger, UBP-type (InterPro:IPR001607), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: zinc finger (ubiquitin-hydrolase) domain-containing protein (TAIR:AT2G42160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36022 : 447.0) no description available & (gnl|cdd|71023 : 107.0) no description available & (reliability: 1060.0) & (original description: Putative BRIZ2, Description = At2g26000, PFAM = PF13639;PF07576;PF02148)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01082_177282-198807' '(at2g44900 : 1232.0) ARABIDILLO-1 and its homolog, ARABIDILLO -2, are unique among Arabidopsis Arm-repeat proteins in having an F-box motif and fall into a phylogenetically distinct subgroup from other plant Arm-repeat proteins Similar to arm repeat protein in rice and armadillo/beta-catenin repeat family protein / F-box family protein in Dictyostelium. ARABIDILLO-1 promote lateral root development. Mutant plants form fewer lateral roots, while ARABIDILLO-1-overexpressing lines produce more lateral roots than wild-type seedlings.; ARABIDILLO-1 (ARABIDILLO-1); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: lateral root development; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARABIDILLO-2 (TAIR:AT3G60350.1); Has 10074 Blast hits to 5287 proteins in 284 species: Archae - 0; Bacteria - 24; Metazoa - 4121; Fungi - 736; Plants - 4117; Viruses - 0; Other Eukaryotes - 1076 (source: NCBI BLink). & (gnl|cdd|39425 : 107.0) no description available & (reliability: 2364.0) & (original description: Putative FBX5, Description = Protein ARABIDILLO 1, PFAM = PF12937;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01093_445041-448959' '(at5g05830 : 99.4) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G01070.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 198.8) & (original description: Putative PGSC0003DMG400026745, Description = RING/FYVE/PHD zinc finger protein, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01105_382696-388426' '(at2g38970 : 779.0) Zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G54780.1); Has 4418 Blast hits to 4397 proteins in 764 species: Archae - 94; Bacteria - 1613; Metazoa - 1251; Fungi - 170; Plants - 535; Viruses - 5; Other Eukaryotes - 750 (source: NCBI BLink). & (gnl|cdd|29239 : 169.0) no description available & (reliability: 1558.0) & (original description: Putative RZFP6, Description = C3HC4 type zinc finger protein, PFAM = PF14624;PF17123;PF00092)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01119_259849-265561' '(at1g53190 : 213.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G15070.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative Dk84, Description = Putative uncharacterized protein Dk84, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01123_133554-137092' '(at2g25410 : 85.5) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G46495.1); Has 9108 Blast hits to 9082 proteins in 297 species: Archae - 0; Bacteria - 0; Metazoa - 2133; Fungi - 633; Plants - 5126; Viruses - 43; Other Eukaryotes - 1173 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative PGSC0003DMG400026235, Description = RING/U-box superfamily protein, putative isoform 4, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01147_8368-11297' '(at4g35070 : 152.0) SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: S-ribonuclease binding protein 1 (TAIR:AT1G45976.1); Has 698 Blast hits to 689 proteins in 99 species: Archae - 0; Bacteria - 9; Metazoa - 204; Fungi - 4; Plants - 376; Viruses - 12; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|36316 : 128.0) no description available & (reliability: 304.0) & (original description: Putative At4g35070, Description = SBP (S-ribonuclease binding protein) family protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01147_555235-566257' '(at1g79810 : 483.0) Dominant suppressor of det1 phenotypes. Encodes a peroxisomal protein essential for Arabidopsis growth. Inserted directly from the cytosol into peroxisomes.; REVERSAL OF THE DET PHENOTYPE 3 (TED3); FUNCTIONS IN: zinc ion binding; INVOLVED IN: protein import into peroxisome matrix, fatty acid beta-oxidation, peroxisome organization, photomorphogenesis; LOCATED IN: cytosol, peroxisome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Pex, N-terminal (InterPro:IPR006845), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38090 : 291.0) no description available & (gnl|cdd|68334 : 157.0) no description available & (reliability: 966.0) & (original description: Putative PEX2, Description = Peroxisome biogenesis protein 2, PFAM = PF00097;PF04757)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01208_159090-161983' '(at2g40830 : 178.0) Encodes a putative RING-H2 finger protein RHC1a.; RING-H2 finger C1A (RHC1A); FUNCTIONS IN: zinc ion binding; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G56580.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative RHC1A, Description = Probable E3 ubiquitin-protein ligase RHC1A, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01209_52702-58918' '(at5g01160 : 283.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C2H2-type (InterPro:IPR007087); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38143 : 150.0) no description available & (reliability: 566.0) & (original description: Putative BnaCnng03840D, Description = BnaCnng03840D protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01300_236377-239528' '(at5g40250 : 290.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G23980.1); Has 9426 Blast hits to 9402 proteins in 296 species: Archae - 0; Bacteria - 0; Metazoa - 2235; Fungi - 712; Plants - 5071; Viruses - 76; Other Eukaryotes - 1332 (source: NCBI BLink). & (reliability: 580.0) & (original description: Putative ATL46, Description = RING-H2 finger protein ATL46, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01326_44603-46992' '(at1g26800 : 94.7) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G14200.1); Has 9899 Blast hits to 9869 proteins in 270 species: Archae - 0; Bacteria - 0; Metazoa - 2681; Fungi - 828; Plants - 5098; Viruses - 14; Other Eukaryotes - 1278 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative RING1, Description = E3 ubiquitin-protein ligase RING1, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01339_47760-74287' '(at2g31510 : 780.0) ARIADNE 7 (ARI7); FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G05890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37026 : 414.0) no description available & (reliability: 1560.0) & (original description: Putative ARI7, Description = Probable E3 ubiquitin-protein ligase ARI7, PFAM = PF01485;PF01485;PF00097)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01392_120910-127676' '(at1g20780 : 172.0) Encodes a protein containing a U-box and an ARM domain.; senescence-associated E3 ubiquitin ligase 1 (SAUL1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of chlorophyll catabolic process, regulation of chlorophyll biosynthetic process, leaf senescence, regulation of abscisic acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G76390.2); Has 2790 Blast hits to 2660 proteins in 201 species: Archae - 0; Bacteria - 20; Metazoa - 434; Fungi - 161; Plants - 1969; Viruses - 3; Other Eukaryotes - 203 (source: NCBI BLink). & (gnl|cdd|47808 : 82.6) no description available & (reliability: 334.0) & (original description: Putative glysoja_015640, Description = U-box domain-containing protein 43, PFAM = PF00514;PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01406_277694-284331' '(at5g05830 : 181.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G01070.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative At5g05830, Description = At5g05830, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01463_322869-325825' '(at5g40250 : 257.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G23980.1); Has 9426 Blast hits to 9402 proteins in 296 species: Archae - 0; Bacteria - 0; Metazoa - 2235; Fungi - 712; Plants - 5071; Viruses - 76; Other Eukaryotes - 1332 (source: NCBI BLink). & (reliability: 514.0) & (original description: Putative BnaA09g54630D, Description = BnaA09g54630D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01478_42932-53843' '(at3g19910 : 196.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G63530.2); Has 15086 Blast hits to 12507 proteins in 429 species: Archae - 8; Bacteria - 555; Metazoa - 4333; Fungi - 1497; Plants - 5032; Viruses - 175; Other Eukaryotes - 3486 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative BnaA01g25770D, Description = BnaA01g25770D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01500_419290-437137' '(at2g39810 : 859.0) A novel protein with a RING finger motif near the amino terminus. Negative regulator of cold responses. Functions as an E3 ligase required for the ubiquitination of ICE1. HOS1 physically interacts with ICE1 and mediates the ubiquitination of ICE1 both in vitro and in vivo. Overexpression represses the expression of CBFs and their downstream genes and confers increased sensitivity to freezing stress.; HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (HOS1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: response to cold, negative regulation of transcription, protein ubiquitination; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; Has 239 Blast hits to 237 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 0; Plants - 80; Viruses - 5; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 1718.0) & (original description: Putative HOS1, Description = E3 ubiquitin-protein ligase HOS1, PFAM = PF13934)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01502_141859-145280' '(at3g03550 : 194.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to karrikin; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G17600.1); Has 9886 Blast hits to 9859 proteins in 306 species: Archae - 0; Bacteria - 2; Metazoa - 2318; Fungi - 804; Plants - 5150; Viruses - 98; Other Eukaryotes - 1514 (source: NCBI BLink). & (gnl|cdd|39828 : 81.6) no description available & (reliability: 388.0) & (original description: Putative ATL51, Description = RING-H2 finger protein ATL51, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01526_1239009-1242377' '(at1g32740 : 169.0) SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: SBP (S-ribonuclease binding protein) family protein (TAIR:AT4G17680.1); Has 798 Blast hits to 798 proteins in 121 species: Archae - 0; Bacteria - 4; Metazoa - 316; Fungi - 15; Plants - 388; Viruses - 21; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|36316 : 159.0) no description available & (reliability: 338.0) & (original description: Putative At1g32740, Description = SBP (S-ribonuclease binding protein) family protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01582_891772-898493' '(at1g57820 : 802.0) Encodes a 645-amino acid methylcytosine-binding protein with a PHD domain, two RING finger domains, and an SRA domain that is involved in centromere heterochromatinization. This protein functions as an E3 ubiquitin ligase in vitro. The protein has been shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the former. It plays a role in the establishment/maintenance of chromatin structure during cell division and is localized in the nucleus. Plants over-expressing VIM1/ORTH2 show an inhibition in root growth and a delay in flowering. Both over-expression of GFP:ORTH2 and loss of ORTH2/VIM1 lead to decreased levels of DNA methylation. GFP:ORTH2 over-expressers also have increased levels of FWA transcripts.; VARIANT IN METHYLATION 1 (VIM1); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), SRA-YDG (InterPro:IPR003105), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT1G57800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|65922 : 203.0) no description available & (reliability: 1604.0) & (original description: Putative ORTH2, Description = E3 ubiquitin-protein ligase ORTHRUS 2, PFAM = PF02182;PF00628;PF13445;PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01586_172295-185205' '(at4g32600 : 363.0) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: protein binding, zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT1G80400.1); Has 7180 Blast hits to 7160 proteins in 223 species: Archae - 0; Bacteria - 6; Metazoa - 2398; Fungi - 545; Plants - 2870; Viruses - 33; Other Eukaryotes - 1328 (source: NCBI BLink). & (reliability: 726.0) & (original description: Putative BnaC01g05880D, Description = BnaC01g05880D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01623_1828785-1833440' '(at1g02610 : 184.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT4G02075.1); Has 1637 Blast hits to 1605 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 761; Fungi - 107; Plants - 616; Viruses - 18; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|36822 : 83.9) no description available & (reliability: 368.0) & (original description: Putative Pit1, Description = At4g02075, PFAM = PF12428;PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01627_247281-260396' '(at1g68820 : 630.0) Transmembrane Fragile-X-F-associated protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane Fragile-X-F-associated protein (InterPro:IPR019396), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Transmembrane Fragile-X-F-associated protein (TAIR:AT1G73950.1); Has 2761 Blast hits to 2715 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 1602; Fungi - 4; Plants - 542; Viruses - 213; Other Eukaryotes - 400 (source: NCBI BLink). & (reliability: 1260.0) & (original description: Putative At1g68820, Description = Putative uncharacterized protein At1g68820, PFAM = PF10269;PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01649_484250-486799' '(at3g10910 : 142.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G05280.1); Has 8963 Blast hits to 8935 proteins in 281 species: Archae - 0; Bacteria - 6; Metazoa - 2174; Fungi - 625; Plants - 4988; Viruses - 47; Other Eukaryotes - 1123 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative ATL72, Description = RING-H2 finger protein ATL72, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01681_696570-702691' '(at3g47550 : 162.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to salt stress; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G62460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36822 : 90.4) no description available & (reliability: 324.0) & (original description: Putative ZFP1, Description = Zinc finger protein, PFAM = PF12428;PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01697_993056-996035' '(at5g17600 : 185.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G03550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 370.0) & (original description: Putative ATL51, Description = RING-H2 finger protein ATL51, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01721_1020754-1087808' '(at5g10650 : 244.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G24870.2); Has 11297 Blast hits to 9396 proteins in 312 species: Archae - 0; Bacteria - 114; Metazoa - 2874; Fungi - 769; Plants - 4627; Viruses - 60; Other Eukaryotes - 2853 (source: NCBI BLink). & (reliability: 488.0) & (original description: Putative HIP1, Description = RING finger protein 165 family, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01723_14620-26667' '(at2g22010 : 1581.0) Encodes a protein predicted to act as a RING E3 ubiquitin ligase. It appears to regulate the stability of the KRP1/ICK1 cyclin dependent kinase inhibitor. Induced by beet severe curly virus (BSCTV) C4 protein.; related to KPC1 (RKP); FUNCTIONS IN: zinc ion binding; INVOLVED IN: regulation of cell cycle, response to virus, proteolysis involved in cellular protein catabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), SPla/RYanodine receptor subgroup (InterPro:IPR018355), B302 (SPRY)-like (InterPro:IPR001870), SPla/RYanodine receptor SPRY (InterPro:IPR003877). & (gnl|cdd|39890 : 359.0) no description available & (gnl|cdd|84907 : 118.0) no description available & (reliability: 3162.0) & (original description: Putative RKP, Description = E3 ubiquitin-protein ligase RKP, PFAM = PF10408;PF00622)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01773_916613-919338' '(gnl|cdd|36041 : 140.0) no description available & (at4g03510 : 127.0) RMA1 encodes a novel 28 kDa protein with a RING finger motif and a C-terminal membrane-anchoring domain that is involved in the secretory pathway. Has E3 ubiquitin ligase activity.; RING membrane-anchor 1 (RMA1); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING membrane-anchor 2 (TAIR:AT4G28270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative RMA1H1, Description = E3 ubiquitin-protein ligase RMA1H1, PFAM = PF00097)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01792_67654-73279' '(at5g10650 : 241.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G24870.2); Has 11297 Blast hits to 9396 proteins in 312 species: Archae - 0; Bacteria - 114; Metazoa - 2874; Fungi - 769; Plants - 4627; Viruses - 60; Other Eukaryotes - 2853 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative At5g10650, Description = At5g10650, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01818_236889-246404' '(at3g45630 : 361.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|37279 : 220.0) no description available & (gnl|cdd|34774 : 219.0) no description available & (reliability: 722.0) & (original description: Putative BnaC03g55430D, Description = BnaC03g55430D protein, PFAM = PF00076;PF14570)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01826_498818-503596' '(at1g24440 : 270.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G13195.1); Has 869 Blast hits to 869 proteins in 155 species: Archae - 0; Bacteria - 0; Metazoa - 288; Fungi - 71; Plants - 339; Viruses - 31; Other Eukaryotes - 140 (source: NCBI BLink). & (gnl|cdd|36257 : 89.0) no description available & (reliability: 540.0) & (original description: Putative ubl, Description = E3 ubiquitin ligase, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01853_46241-58276' '(at5g60250 : 340.0) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G25370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37023 : 254.0) no description available & (reliability: 680.0) & (original description: Putative BnaA06g18480D, Description = BnaA06g18480D protein, PFAM = PF13456;PF01485;PF01485)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01856_351181-354080' '(at3g16720 : 154.0) RING-H2 protein induced after exposure to chitin or inactivated crude cellulase preparations.; TOXICOS EN LEVADURA 2 (ATL2); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin, defense response; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G15975.1); Has 9711 Blast hits to 9689 proteins in 300 species: Archae - 0; Bacteria - 2; Metazoa - 2552; Fungi - 813; Plants - 5050; Viruses - 85; Other Eukaryotes - 1209 (source: NCBI BLink). & (q9lrb7|el5_orysa : 80.1) E3 ubiquitin-protein ligase EL5 (EC 6.3.2.-) - Oryza sativa (Rice) & (reliability: 308.0) & (original description: Putative ATL2, Description = RING-H2 finger protein ATL2, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01866_356486-359091' '(at1g04360 : 94.4) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G43420.1); Has 9268 Blast hits to 9239 proteins in 300 species: Archae - 0; Bacteria - 0; Metazoa - 2276; Fungi - 656; Plants - 4907; Viruses - 85; Other Eukaryotes - 1344 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative glysoja_008903, Description = RING-H2 finger protein ATL2, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01876_29903-43304' '(at2g30580 : 377.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 2 (DRIP2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 1 (TAIR:AT1G06770.1); Has 1631 Blast hits to 1626 proteins in 163 species: Archae - 0; Bacteria - 2; Metazoa - 1227; Fungi - 58; Plants - 232; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|37871 : 125.0) no description available & (reliability: 754.0) & (original description: Putative DRIP2, Description = E3 ubiquitin protein ligase DRIP2, PFAM = PF13923)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01903_132494-135021' '(at3g11110 : 97.8) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: stem, cotyledon, leaf whorl, leaf, stamen; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G27940.1); Has 9317 Blast hits to 9293 proteins in 287 species: Archae - 0; Bacteria - 0; Metazoa - 2264; Fungi - 653; Plants - 5062; Viruses - 56; Other Eukaryotes - 1282 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative ATL66, Description = RING-H2 finger protein ATL66, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01917_508879-511679' '(at1g69330 : 276.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G29270.2); Has 288 Blast hits to 287 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 134; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 552.0) & (original description: Putative BnaA06g30960D, Description = BnaA06g30960D protein, PFAM = PF13445)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01948_15973-22464' '(at5g14420 : 580.0) RING domain ligase2 (RGLG2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Copine (InterPro:IPR010734), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: RING domain ligase1 (TAIR:AT3G01650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36541 : 334.0) no description available & (gnl|cdd|29232 : 283.0) no description available & (reliability: 1160.0) & (original description: Putative RGLG2, Description = E3 ubiquitin-protein ligase RGLG2, PFAM = PF13920;PF07002)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01951_29330-33964' '(at5g59000 : 129.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G05830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative pco123421(364), Description = Zinc finger, RING-CH-type, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01956_1024487-1026977' '(at5g43420 : 235.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G04360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 470.0) & (original description: Putative ATL1, Description = RING-H2 finger protein ATL16, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf01959_474551-477481' '(at4g27470 : 155.0) Encodes a RING finger E3 ubiquitin ligase.; RING membrane-anchor 3 (RMA3); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING membrane-anchor 1 (TAIR:AT4G03510.2); Has 2828 Blast hits to 2826 proteins in 265 species: Archae - 0; Bacteria - 0; Metazoa - 1348; Fungi - 459; Plants - 695; Viruses - 22; Other Eukaryotes - 304 (source: NCBI BLink). & (gnl|cdd|36041 : 153.0) no description available & (reliability: 310.0) & (original description: Putative RMA3, Description = E3 ubiquitin-protein ligase RMA3, PFAM = PF13923)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02026_995884-1006829' '(at1g49230 : 155.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G49200.1); Has 9168 Blast hits to 9144 proteins in 279 species: Archae - 0; Bacteria - 0; Metazoa - 2452; Fungi - 610; Plants - 4926; Viruses - 41; Other Eukaryotes - 1139 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative ATL72, Description = RING-H2 finger protein ATL1L, PFAM = PF17123)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02026_1113686-1116390' '(at1g49230 : 192.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G49200.1); Has 9168 Blast hits to 9144 proteins in 279 species: Archae - 0; Bacteria - 0; Metazoa - 2452; Fungi - 610; Plants - 4926; Viruses - 41; Other Eukaryotes - 1139 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative ATL78, Description = RING-H2 finger protein ATL78, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02062_410875-426336' '(at3g63530 : 202.0) Encodes a novel E3 ubiquitin ligase that acts as a central negative regulator of Arabidopsis floral organ size. Organ size is limited by restricting the period of proliferative growth, rather than the rate of growth and appears to act in a novel pathway, independent of ANT and JAG. Both mRNA and protein are expressed in all actively growing regions of the plant and the vasculature and the protein is rapidly turned over by proteasome-mediated degradation.; BIG BROTHER (BB); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G19910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative NP8, Description = Integrins alpha chain family protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02063_408416-412488' '(at5g43420 : 250.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G04360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 500.0) & (original description: Putative ATL1, Description = RING-H2 finger protein ATL1, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02123_207544-210791' '(at2g44410 : 154.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G58030.4); Has 1419 Blast hits to 1419 proteins in 219 species: Archae - 0; Bacteria - 0; Metazoa - 641; Fungi - 147; Plants - 430; Viruses - 10; Other Eukaryotes - 191 (source: NCBI BLink). & (gnl|cdd|36041 : 130.0) no description available & (reliability: 308.0) & (original description: Putative glysoja_031259, Description = E3 ubiquitin-protein ligase RMA2, PFAM = PF14634)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02145_660014-667059' '(at1g11950 : 778.0) Transcription factor jumonji (jmjC) domain-containing protein; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G62310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36570 : 636.0) no description available & (reliability: 1502.0) & (original description: Putative IBM1, Description = Lysine-specific demethylase 3B, PFAM = PF02373;PF10497)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02151_120075-124660' '(at5g38895 : 130.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G15790.2). & (reliability: 260.0) & (original description: Putative RZFP4, Description = E3 ubiquitin-protein ligase, PFAM = PF12678)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02156_414031-420560' '(at2g38970 : 497.0) Zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G54780.1); Has 4418 Blast hits to 4397 proteins in 764 species: Archae - 94; Bacteria - 1613; Metazoa - 1251; Fungi - 170; Plants - 535; Viruses - 5; Other Eukaryotes - 750 (source: NCBI BLink). & (gnl|cdd|29239 : 156.0) no description available & (reliability: 994.0) & (original description: Putative RZFP6, Description = C3HC4-type RING finger-containing protein, PFAM = PF00092;PF17123;PF14624)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02156_1146866-1150028' '(at3g12920 : 219.0) SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G79110.2); Has 1634 Blast hits to 1631 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 874; Fungi - 0; Plants - 566; Viruses - 36; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|36316 : 167.0) no description available & (reliability: 438.0) & (original description: Putative BRG3, Description = Probable BOI-related E3 ubiquitin-protein ligase 3, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02215_136543-145907' '(at1g67180 : 316.0) zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: transcription coactivators (TAIR:AT4G02110.1); Has 2482 Blast hits to 2442 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 1048; Fungi - 450; Plants - 465; Viruses - 61; Other Eukaryotes - 458 (source: NCBI BLink). & (gnl|cdd|36043 : 105.0) no description available & (reliability: 632.0) & (original description: Putative BnaA02g12920D, Description = BnaA02g12920D protein, PFAM = PF12738;PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02237_151700-155484' '(at5g62910 : 151.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G48070.2); Has 749 Blast hits to 665 proteins in 188 species: Archae - 0; Bacteria - 6; Metazoa - 241; Fungi - 216; Plants - 135; Viruses - 4; Other Eukaryotes - 147 (source: NCBI BLink). & (gnl|cdd|37279 : 140.0) no description available & (reliability: 302.0) & (original description: Putative BnaCnng26100D, Description = BnaCnng26100D protein, PFAM = PF14570)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02240_918724-925776' '(at3g47160 : 311.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G58787.1). & (gnl|cdd|36257 : 131.0) no description available & (reliability: 622.0) & (original description: Putative ubl, Description = E3 ubiquitin ligase, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02253_1392995-1396425' '(at5g40140 : 398.0) RING/U-box superfamily protein with ARM repeat domain; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex, chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 38 (TAIR:AT5G65200.1); Has 3757 Blast hits to 2892 proteins in 207 species: Archae - 0; Bacteria - 10; Metazoa - 408; Fungi - 448; Plants - 2529; Viruses - 0; Other Eukaryotes - 362 (source: NCBI BLink). & (q64ha9|spl11_orysa : 134.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 796.0) & (original description: Putative PUB40, Description = U-box domain-containing protein 40, PFAM = PF04564;PF00514;PF00514)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02283_154269-158473' '(at2g46495 : 216.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G25410.1); Has 16199 Blast hits to 8554 proteins in 281 species: Archae - 0; Bacteria - 0; Metazoa - 3863; Fungi - 941; Plants - 9494; Viruses - 61; Other Eukaryotes - 1840 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative ATL20, Description = Putative RING-H2 finger protein ATL21A, PFAM = PF14380;PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02283_178084-183131' '(at2g46495 : 289.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G25410.1); Has 16199 Blast hits to 8554 proteins in 281 species: Archae - 0; Bacteria - 0; Metazoa - 3863; Fungi - 941; Plants - 9494; Viruses - 61; Other Eukaryotes - 1840 (source: NCBI BLink). & (reliability: 578.0) & (original description: Putative ATL21A, Description = Putative RING-H2 finger protein ATL21A, PFAM = PF14380;PF13947;PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02299_289179-297242' '(at4g21070 : 551.0) Encodes AtBRCA1, an ortholog of the human breast cancer susceptibility gene 1. Contains one N-terminal RING finger, two C-terminal BRCT and the p300/CBP interacting domain. Strongly induced by gamma rays, consistent with a putative role in DNA repair and in cell cycle control.; breast cancer susceptibility1 (BRCA1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: DNA repair, response to gamma radiation; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), BRCA1 (InterPro:IPR011364), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: breast cancer associated RING 1 (TAIR:AT1G04020.2); Has 8999 Blast hits to 8407 proteins in 1134 species: Archae - 0; Bacteria - 191; Metazoa - 6557; Fungi - 520; Plants - 721; Viruses - 32; Other Eukaryotes - 978 (source: NCBI BLink). & (gnl|cdd|39563 : 247.0) no description available & (reliability: 1102.0) & (original description: Putative ROW1, Description = Brca1 associated ring domain, putative, PFAM = PF16589;PF13923;PF00533;PF13771)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02310_496728-512000' '(at5g22000 : 309.0) encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. Double mutant analyses with RHF1a suggests that RHF2a may be involved in targetting ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF2a is expressed in all four floral whorls and is present at ~8-fold higher levels than RHF1a in inflorescences by RT-PCR analyses.; RING-H2 group F2A (RHF2A); FUNCTIONS IN: zinc ion binding; INVOLVED IN: regulation of cell cycle, proteolysis involved in cellular protein catabolic process, megagametogenesis, microgametogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 group F1A (TAIR:AT4G14220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 618.0) & (original description: Putative RHF2A, Description = E3 ubiquitin-protein ligase RHF2A, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02312_223269-234738' '(at1g11020 : 367.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT2G22120.2); Has 1259 Blast hits to 1258 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 590; Fungi - 144; Plants - 311; Viruses - 11; Other Eukaryotes - 203 (source: NCBI BLink). & (gnl|cdd|36822 : 98.1) no description available & (reliability: 734.0) & (original description: Putative ZNF2, Description = RING/FYVE/PHD zinc finger superfamily protein, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02360_353898-379754' '(at4g00990 : 727.0) Transcription factor jumonji (jmjC) domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, RING-type (InterPro:IPR001841), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G11950.1); Has 966 Blast hits to 671 proteins in 113 species: Archae - 0; Bacteria - 8; Metazoa - 538; Fungi - 54; Plants - 301; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36570 : 333.0) no description available & (reliability: 1454.0) & (original description: Putative IBM1, Description = Lysine-specific demethylase 3B, PFAM = PF02373)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02378_43036-46085' '(at4g35070 : 155.0) SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: S-ribonuclease binding protein 1 (TAIR:AT1G45976.1); Has 698 Blast hits to 689 proteins in 99 species: Archae - 0; Bacteria - 9; Metazoa - 204; Fungi - 4; Plants - 376; Viruses - 12; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|36316 : 122.0) no description available & (reliability: 310.0) & (original description: Putative At4g35070, Description = SBP (S-ribonuclease binding protein) family protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02404_293625-298748' '(at3g54850 : 746.0) Encodes a protein with a typical U-box domain followed by an Armadillo repeat region, a domain organization that is frequently found in plant U-box proteins. Displays ubiquitin ligase activity in vitro.; plant U-box 14 (PUB14); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 13 (TAIR:AT3G46510.1); Has 7501 Blast hits to 4963 proteins in 297 species: Archae - 2; Bacteria - 29; Metazoa - 1804; Fungi - 795; Plants - 4036; Viruses - 3; Other Eukaryotes - 832 (source: NCBI BLink). & (q64ha9|spl11_orysa : 561.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|39425 : 107.0) no description available & (gnl|cdd|47808 : 105.0) no description available & (reliability: 1492.0) & (original description: Putative PUB14, Description = U-box domain-containing protein 14, PFAM = PF04564;PF00514;PF00514)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02420_299020-316153' '(at4g25230 : 726.0) RPM1 interacting protein 2, has a CUE domain which is sufficient for the interaction with RPM1.Positive regulator of RPM1 and PRS2 mediated hypersensitive response.Functions as ubiquitin ligase and binds to RPM1.; RPM1 interacting protein 2 (RIN2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: RPM1 interacting protein 3 (TAIR:AT5G51450.1); Has 2005 Blast hits to 1973 proteins in 236 species: Archae - 0; Bacteria - 2; Metazoa - 699; Fungi - 246; Plants - 674; Viruses - 9; Other Eukaryotes - 375 (source: NCBI BLink). & (gnl|cdd|36020 : 211.0) no description available & (gnl|cdd|34840 : 90.9) no description available & (reliability: 1452.0) & (original description: Putative RIN2, Description = E3 ubiquitin protein ligase RIN2, PFAM = PF02845;PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02440_146450-168556' '(at4g21350 : 369.0) Encodes a U-box/ARM repeat protein required fore self-incompatibility.; plant U-box 8 (PUB8); FUNCTIONS IN: ubiquitin-protein ligase activity, binding, zinc ion binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 13 (TAIR:AT3G46510.1); Has 3561 Blast hits to 3109 proteins in 223 species: Archae - 0; Bacteria - 18; Metazoa - 344; Fungi - 298; Plants - 2564; Viruses - 3; Other Eukaryotes - 334 (source: NCBI BLink). & (q64ha9|spl11_orysa : 142.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 99.0) no description available & (reliability: 738.0) & (original description: Putative PUB8, Description = U-box domain-containing protein 8, PFAM = PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02459_224440-232786' '(at4g10160 : 135.0) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G10150.1); Has 9335 Blast hits to 9314 proteins in 290 species: Archae - 0; Bacteria - 6; Metazoa - 2290; Fungi - 731; Plants - 4944; Viruses - 53; Other Eukaryotes - 1311 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative ATL7, Description = RING-H2 finger protein ATL7, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02471_701501-704460' '(at3g60220 : 157.0) Encodes a putative RING-H2 zinc finger protein ATL4 (ATL4).; TOXICOS EN LEVADURA 4 (ATL4); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G72200.1); Has 8923 Blast hits to 8901 proteins in 292 species: Archae - 0; Bacteria - 8; Metazoa - 2301; Fungi - 667; Plants - 4759; Viruses - 54; Other Eukaryotes - 1134 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative BnaA09g38290D, Description = BnaA09g38290D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02482_332159-335670' '(at5g05280 : 101.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G10910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative ATL72, Description = RING-H2 finger protein ATL72, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02482_335923-338890' '(at3g10910 : 108.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G05280.1); Has 8963 Blast hits to 8935 proteins in 281 species: Archae - 0; Bacteria - 6; Metazoa - 2174; Fungi - 625; Plants - 4988; Viruses - 47; Other Eukaryotes - 1123 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative ATL72, Description = RING-H2 finger protein ATL72, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02507_289931-292683' '(at4g27470 : 145.0) Encodes a RING finger E3 ubiquitin ligase.; RING membrane-anchor 3 (RMA3); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING membrane-anchor 1 (TAIR:AT4G03510.2); Has 2828 Blast hits to 2826 proteins in 265 species: Archae - 0; Bacteria - 0; Metazoa - 1348; Fungi - 459; Plants - 695; Viruses - 22; Other Eukaryotes - 304 (source: NCBI BLink). & (gnl|cdd|36041 : 141.0) no description available & (reliability: 290.0) & (original description: Putative MKB1, Description = MAKIBISHI 1, PFAM = PF00097)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02509_712626-718006' '(at3g08505 : 323.0) zinc finger (CCCH-type/C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36257 : 133.0) no description available & (reliability: 646.0) & (original description: Putative At3g63550, Description = Zinc finger CCCH domain-containing protein 69, PFAM = PF00097;PF00642;PF00642)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02518_94544-100417' '(at1g53190 : 204.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G15070.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative Sb09g028550, Description = Putative uncharacterized protein Sb09g028550, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02541_997566-1010940' '(at3g08505 : 397.0) zinc finger (CCCH-type/C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36257 : 166.0) no description available & (reliability: 794.0) & (original description: Putative mkrn1, Description = E3 ubiquitin-protein ligase makorin, PFAM = PF00642;PF00097)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02541_1055080-1074351' '(at1g30860 : 175.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: stem, stamen, pollen tube; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G34920.1); Has 4912 Blast hits to 4241 proteins in 362 species: Archae - 9; Bacteria - 172; Metazoa - 2090; Fungi - 292; Plants - 512; Viruses - 97; Other Eukaryotes - 1740 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative PGSC0003DMG400011288, Description = Protein neuralized, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02603_107315-114350' '(at5g60710 : 760.0) Zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Zinc finger (C3HC4-type RING finger) family protein (TAIR:AT2G38970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29239 : 163.0) no description available & (reliability: 1520.0) & (original description: Putative RZFP6, Description = C3HC4 type zinc finger protein, PFAM = PF17123;PF14624;PF00092)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02621_588060-591006' '(at4g35070 : 144.0) SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: S-ribonuclease binding protein 1 (TAIR:AT1G45976.1); Has 698 Blast hits to 689 proteins in 99 species: Archae - 0; Bacteria - 9; Metazoa - 204; Fungi - 4; Plants - 376; Viruses - 12; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|36316 : 127.0) no description available & (reliability: 288.0) & (original description: Putative PGSC0003DMG400006187, Description = SBP (S-ribonuclease binding protein) family protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02665_1329884-1333554' '(at5g01980 : 216.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G08139.1); Has 7827 Blast hits to 7813 proteins in 270 species: Archae - 0; Bacteria - 9; Metazoa - 2445; Fungi - 565; Plants - 3731; Viruses - 72; Other Eukaryotes - 1005 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative PGSC0003DMG400027763, Description = Zinc finger, C3HC4 type (RING finger) protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02700_168316-172055' '(at4g26400 : 84.7) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G56340.1); Has 10466 Blast hits to 10426 proteins in 293 species: Archae - 0; Bacteria - 6; Metazoa - 2695; Fungi - 997; Plants - 5209; Viruses - 70; Other Eukaryotes - 1489 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative PGSC0003DMG400018972, Description = E3 ubiquitin-protein ligase RING1-like protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02720_5705-8145' '(at1g67856 : 94.4) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G24580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative RZFP1, Description = RING-H2 type zinc finger, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02737_85583-90924' '(at3g60080 : 127.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G44330.1); Has 9920 Blast hits to 9845 proteins in 282 species: Archae - 0; Bacteria - 98; Metazoa - 2725; Fungi - 927; Plants - 4887; Viruses - 7; Other Eukaryotes - 1276 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative BnaA05g19240D, Description = Cytokinesis negative regulator RCP1, PFAM = PF14369;PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02750_124330-131308' '(at5g08750 : 319.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G63780.1); Has 309 Blast hits to 307 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 307; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 638.0) & (original description: Putative SHA1, Description = At5g63780, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02752_1021845-1028123' '(at5g18650 : 414.0) CHY-type/CTCHY-type/RING-type Zinc finger protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G62970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37151 : 238.0) no description available & (reliability: 828.0) & (original description: Putative MIEL1, Description = E3 ubiquitin-protein ligase MIEL1, PFAM = PF14599;PF05495;PF13445)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02756_153689-162129' '(at3g07370 : 381.0) Encodes AtCHIP, a new class of E3 ubiquitin ligases with three tetratricopeptide repeats and a U-box domain, structurally similar to the animal CHIP proteins. Plays an important role in plant cellular metabolism under temperature stress conditions. Functions as an E3 ubiquitin ligase of protein phosphatase 2A subunits and alters plant response to abscisic acid treatment.; carboxyl terminus of HSC70-interacting protein (CHIP); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: response to salt stress, response to temperature stimulus, response to abscisic acid stimulus, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), U box domain (InterPro:IPR003613), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: protein phosphatase 5.2 (TAIR:AT2G42810.2); Has 6721 Blast hits to 5903 proteins in 442 species: Archae - 38; Bacteria - 482; Metazoa - 2236; Fungi - 1004; Plants - 1936; Viruses - 0; Other Eukaryotes - 1025 (source: NCBI BLink). & (gnl|cdd|39841 : 272.0) no description available & (gnl|cdd|86687 : 103.0) no description available & (reliability: 762.0) & (original description: Putative CHIP, Description = E3 ubiquitin-protein ligase CHIP, PFAM = PF12895;PF13181;PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02771_212630-215076' '(at2g37580 : 84.0) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G17905.1); Has 8117 Blast hits to 8098 proteins in 285 species: Archae - 0; Bacteria - 0; Metazoa - 1838; Fungi - 580; Plants - 4554; Viruses - 68; Other Eukaryotes - 1077 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative , Description = RING-H2 finger protein ATL2J, putative, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02786_136333-160522' '(at1g68820 : 250.0) Transmembrane Fragile-X-F-associated protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane Fragile-X-F-associated protein (InterPro:IPR019396), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Transmembrane Fragile-X-F-associated protein (TAIR:AT1G73950.1); Has 2761 Blast hits to 2715 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 1602; Fungi - 4; Plants - 542; Viruses - 213; Other Eukaryotes - 400 (source: NCBI BLink). & (reliability: 500.0) & (original description: Putative Os09g0410400, Description = Os09g0410400 protein, PFAM = PF10269;PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02793_1708031-1720535' '(at3g54360 : 461.0) zinc ion binding; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); Has 748 Blast hits to 691 proteins in 131 species: Archae - 16; Bacteria - 104; Metazoa - 470; Fungi - 16; Plants - 58; Viruses - 8; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 922.0) & (original description: Putative Os01g0104100, Description = Os01g0104100 protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02797_128678-131124' '(at2g04240 : 143.0) Encodes a small protein with an N-terminal trans-membrane domain and a RING-H2 zinc finger motif located at the C-terminus. Gene expression is induced by salt and osmotic stress. Transcrips levels are induced by DELLA proteins and repressed by gibberellic acid. Involved in ABA metabolism.; XERICO; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: brassinosteroid-responsive RING-H2 (TAIR:AT3G61460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative XERICO, Description = Probable E3 ubiquitin-protein ligase XERICO, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02812_244776-264251' '(at1g20823 : 148.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G76410.1); Has 9063 Blast hits to 9039 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 2341; Fungi - 637; Plants - 4964; Viruses - 26; Other Eukaryotes - 1095 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative ATL80, Description = RING-H2 finger protein ATL80, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02821_1213303-1262172' '(at4g17920 : 198.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G46650.1); Has 8779 Blast hits to 8757 proteins in 280 species: Archae - 0; Bacteria - 0; Metazoa - 2402; Fungi - 735; Plants - 4417; Viruses - 37; Other Eukaryotes - 1188 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative ATL29, Description = RING-H2 finger protein ATL29, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02821_1332591-1348674' '(at4g17910 : 108.0) transferases, transferring acyl groups; FUNCTIONS IN: transferase activity, transferring acyl groups; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: GWT1 (InterPro:IPR009447); Has 62 Blast hits to 62 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 21; Plants - 15; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative PIGW, Description = Phosphatidylinositol-glycan biosynthesis class W protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02824_438513-444617' '(at1g68940 : 761.0) Armadillo/beta-catenin-like repeat family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: senescence-associated E3 ubiquitin ligase 1 (TAIR:AT1G20780.1); Has 2072 Blast hits to 1938 proteins in 179 species: Archae - 0; Bacteria - 128; Metazoa - 110; Fungi - 40; Plants - 1633; Viruses - 3; Other Eukaryotes - 158 (source: NCBI BLink). & (reliability: 1522.0) & (original description: Putative PUB42, Description = Putative U-box domain-containing protein 42, PFAM = PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02909_158757-161665' '(at5g17600 : 183.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G03550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39828 : 80.0) no description available & (reliability: 366.0) & (original description: Putative RING1, Description = ATL RING-H2 finger protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02936_85358-88769' '(at3g49810 : 531.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G65920.1); Has 2157 Blast hits to 2086 proteins in 103 species: Archae - 0; Bacteria - 14; Metazoa - 79; Fungi - 29; Plants - 1932; Viruses - 3; Other Eukaryotes - 100 (source: NCBI BLink). & (q64ha9|spl11_orysa : 106.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 94.2) no description available & (reliability: 1050.0) & (original description: Putative PUB31, Description = U-box domain-containing protein 31, PFAM = PF05804;PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf02953_104535-107263' '(at4g22250 : 122.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G03965.1); Has 910 Blast hits to 910 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 334; Fungi - 67; Plants - 314; Viruses - 43; Other Eukaryotes - 152 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative At4g03965, Description = C3HC4 type RING-finger protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03012_463441-472266' '(at1g71980 : 404.0) Protease-associated (PA) RING/U-box zinc finger family protein; FUNCTIONS IN: peptidase activity, zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: Protease-associated (PA) RING/U-box zinc finger family protein (TAIR:AT1G22670.1); Has 15658 Blast hits to 9675 proteins in 411 species: Archae - 0; Bacteria - 271; Metazoa - 3014; Fungi - 1211; Plants - 4865; Viruses - 29; Other Eukaryotes - 6268 (source: NCBI BLink). & (gnl|cdd|39828 : 298.0) no description available & (gnl|cdd|80345 : 149.0) no description available & (reliability: 808.0) & (original description: Putative RMR1, Description = Receptor homology region, transmembrane domain- and RING domain-containing protein 1, PFAM = PF02225;PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03046_170466-173317' '(at4g17905 : 90.9) Putative RING-H2 finger protein ATL4H.; ATL4H; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G03550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative , Description = , PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03068_117469-121822' '(at5g49665 : 622.0) Zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Zinc finger (C3HC4-type RING finger) family protein (TAIR:AT2G22680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29239 : 183.0) no description available & (reliability: 1244.0) & (original description: Putative WAV3, Description = At5g49665, PFAM = PF13519;PF17123)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03077_267379-273351' '(at2g38185 : 125.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G38220.1). & (reliability: 234.0) & (original description: Putative TCM_034755, Description = RING/U-box superfamily protein isoform 2, PFAM = PF16040;PF16041;PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03085_388851-391573' '(at2g42350 : 108.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: stem, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G42360.1); Has 9654 Blast hits to 9629 proteins in 290 species: Archae - 0; Bacteria - 0; Metazoa - 2581; Fungi - 703; Plants - 5073; Viruses - 58; Other Eukaryotes - 1239 (source: NCBI BLink). & (q9lrb7|el5_orysa : 80.9) E3 ubiquitin-protein ligase EL5 (EC 6.3.2.-) - Oryza sativa (Rice) & (reliability: 216.0) & (original description: Putative ATL41, Description = E3 ubiquitin-protein ligase ATL41, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03085_821064-834714' '(at4g17910 : 372.0) transferases, transferring acyl groups; FUNCTIONS IN: transferase activity, transferring acyl groups; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: GWT1 (InterPro:IPR009447); Has 62 Blast hits to 62 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 21; Plants - 15; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|34666 : 199.0) no description available & (gnl|cdd|35632 : 193.0) no description available & (reliability: 744.0) & (original description: Putative At4g17910, Description = Uncharacterized protein At4g17910, PFAM = PF06423)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03099_76409-79353' '(at5g40250 : 298.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G23980.1); Has 9426 Blast hits to 9402 proteins in 296 species: Archae - 0; Bacteria - 0; Metazoa - 2235; Fungi - 712; Plants - 5071; Viruses - 76; Other Eukaryotes - 1332 (source: NCBI BLink). & (reliability: 596.0) & (original description: Putative ATL47, Description = RING-H2 finger protein ATL47, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03171_101326-107198' '(at3g05870 : 151.0) Subunit of the anaphase promoting complex, a ubiquitin ligase complex that regulates progression through the cell cycle.; anaphase-promoting complex/cyclosome 11 (APC11); FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: regulation of mitotic cell cycle; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING-box 1 (TAIR:AT5G20570.1). & (gnl|cdd|36706 : 131.0) no description available & (gnl|cdd|34793 : 92.4) no description available & (reliability: 302.0) & (original description: Putative APC11, Description = Anaphase-promoting complex subunit 11, PFAM = PF12861)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03189_43439-46941' '(at4g30400 : 243.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to karrikin; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G18650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative ATL13, Description = RING-H2 finger protein ATL13, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03208_634199-640756' '(at3g24800 : 297.0) Contains two ring finger domains and one ZZ domain. Week similarity to yeast Rad18p. Putative component of the N-end rule pathway (ubiquitin-dependent proteolysis).; proteolysis 1 (PRT1); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT1G18660.1); Has 4154 Blast hits to 3358 proteins in 276 species: Archae - 0; Bacteria - 0; Metazoa - 2882; Fungi - 341; Plants - 509; Viruses - 3; Other Eukaryotes - 419 (source: NCBI BLink). & (gnl|cdd|39361 : 81.6) no description available & (reliability: 594.0) & (original description: Putative PRT1, Description = E3 ubiquitin-protein ligase PRT1, PFAM = PF13445;PF00569;PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03210_77289-87124' '(at5g60580 : 308.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G09760.1); Has 1580 Blast hits to 1234 proteins in 158 species: Archae - 0; Bacteria - 10; Metazoa - 420; Fungi - 112; Plants - 626; Viruses - 18; Other Eukaryotes - 394 (source: NCBI BLink). & (gnl|cdd|36822 : 118.0) no description available & (reliability: 616.0) & (original description: Putative Sb10g027165, Description = Putative uncharacterized protein Sb10g027165, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03221_126911-130104' '(at3g19950 : 189.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G55530.1); Has 11106 Blast hits to 11075 proteins in 297 species: Archae - 0; Bacteria - 6; Metazoa - 2940; Fungi - 1152; Plants - 5266; Viruses - 73; Other Eukaryotes - 1669 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative At3g19950, Description = E3 ubiquitin-protein ligase RING1-like, PFAM = PF13639;PF14369)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03239_517255-519887' '(at3g61550 : 150.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G46160.1); Has 8101 Blast hits to 8077 proteins in 273 species: Archae - 0; Bacteria - 0; Metazoa - 1969; Fungi - 558; Plants - 4626; Viruses - 27; Other Eukaryotes - 921 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative ATL68, Description = RING-H2 finger protein ATL68, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03265_120174-122827' '(at3g25030 : 107.0) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G13100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative ZFL, Description = RING/U-box domain-containing protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03326_562468-570099' '(at1g32360 : 337.0) Zinc finger (CCCH-type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT2G35430.1); Has 13421 Blast hits to 5509 proteins in 634 species: Archae - 13; Bacteria - 2784; Metazoa - 4906; Fungi - 574; Plants - 3348; Viruses - 263; Other Eukaryotes - 1533 (source: NCBI BLink). & (reliability: 674.0) & (original description: Putative Os08g0159800, Description = Zinc finger CCCH domain-containing protein 56, PFAM = PF00642;PF00642)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03329_257464-261600' '(at5g01520 : 309.0) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G47160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36257 : 125.0) no description available & (reliability: 618.0) & (original description: Putative ubl, Description = RING finger protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03341_182579-190903' '(at3g16090 : 555.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G65040.2); Has 7341 Blast hits to 7321 proteins in 267 species: Archae - 0; Bacteria - 4; Metazoa - 2254; Fungi - 727; Plants - 3286; Viruses - 21; Other Eukaryotes - 1049 (source: NCBI BLink). & (gnl|cdd|36020 : 252.0) no description available & (gnl|cdd|34840 : 184.0) no description available & (reliability: 1110.0) & (original description: Putative HRD1A, Description = ERAD-associated E3 ubiquitin-protein ligase HRD1A, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03351_248560-253454' '(at2g01275 : 277.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G38070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36822 : 104.0) no description available & (reliability: 554.0) & (original description: Putative At2g01275, Description = At2g01275, PFAM = PF12906;PF12428)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03375_286775-309246' '(at4g00990 : 585.0) Transcription factor jumonji (jmjC) domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, RING-type (InterPro:IPR001841), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G11950.1); Has 966 Blast hits to 671 proteins in 113 species: Archae - 0; Bacteria - 8; Metazoa - 538; Fungi - 54; Plants - 301; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36570 : 352.0) no description available & (reliability: 1170.0) & (original description: Putative IBM1, Description = Lysine-specific demethylase 3B, PFAM = PF02373)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03398_807983-811510' '(at2g44410 : 164.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G58030.4); Has 1419 Blast hits to 1419 proteins in 219 species: Archae - 0; Bacteria - 0; Metazoa - 641; Fungi - 147; Plants - 430; Viruses - 10; Other Eukaryotes - 191 (source: NCBI BLink). & (gnl|cdd|36041 : 132.0) no description available & (reliability: 328.0) & (original description: Putative PGSC0003DMG400006310, Description = Zinc finger, C3HC4 type (RING finger) protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03436_121567-126854' '(at1g12760 : 316.0) Zinc finger, C3HC4 type (RING finger) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT1G63170.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 632.0) & (original description: Putative At4g11680, Description = E3 ubiquitin-protein ligase At4g11680, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03474_331153-333695' '(at1g26800 : 98.2) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G14200.1); Has 9899 Blast hits to 9869 proteins in 270 species: Archae - 0; Bacteria - 0; Metazoa - 2681; Fungi - 828; Plants - 5098; Viruses - 14; Other Eukaryotes - 1278 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative RING1, Description = Anaphase-promoting complex subunit 11 RING-H2 finger protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03479_589789-595632' '(at5g48655 : 144.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G07200.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative At5g48655, Description = Putative RING zinc finger, PFAM = PF13923)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03525_92553-95065' '(at5g05280 : 96.7) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G10910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative Sb10g026650, Description = Putative uncharacterized protein Sb10g026650, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03534_64501-68558' '(at1g10560 : 516.0) Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays.; plant U-box 18 (PUB18); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G60190.1); Has 3089 Blast hits to 2773 proteins in 228 species: Archae - 0; Bacteria - 22; Metazoa - 252; Fungi - 338; Plants - 2172; Viruses - 3; Other Eukaryotes - 302 (source: NCBI BLink). & (q64ha9|spl11_orysa : 230.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 92.2) no description available & (reliability: 1032.0) & (original description: Putative PUB18, Description = U-box domain-containing protein 18, PFAM = PF00514;PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03548_180841-186719' '(at1g57820 : 654.0) Encodes a 645-amino acid methylcytosine-binding protein with a PHD domain, two RING finger domains, and an SRA domain that is involved in centromere heterochromatinization. This protein functions as an E3 ubiquitin ligase in vitro. The protein has been shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the former. It plays a role in the establishment/maintenance of chromatin structure during cell division and is localized in the nucleus. Plants over-expressing VIM1/ORTH2 show an inhibition in root growth and a delay in flowering. Both over-expression of GFP:ORTH2 and loss of ORTH2/VIM1 lead to decreased levels of DNA methylation. GFP:ORTH2 over-expressers also have increased levels of FWA transcripts.; VARIANT IN METHYLATION 1 (VIM1); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), SRA-YDG (InterPro:IPR003105), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT1G57800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|65922 : 194.0) no description available & (reliability: 1308.0) & (original description: Putative ORTH2, Description = E3 ubiquitin-protein ligase ORTHRUS 2, PFAM = PF02182)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03595_1044791-1062380' '(at3g19910 : 218.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G63530.2); Has 15086 Blast hits to 12507 proteins in 429 species: Archae - 8; Bacteria - 555; Metazoa - 4333; Fungi - 1497; Plants - 5032; Viruses - 175; Other Eukaryotes - 3486 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative BnaA01g25770D, Description = BnaA01g25770D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03671_198579-208282' '(at4g14220 : 187.0) encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. RHF1a can interact with the cell cycle inhibitor ICK4/KRP6 in vitro. It apppears to target ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF1a is expressed in the carpels throughout floral development. It is expressed in various tissues of the anthers during the early stages of anther development but not in stage 12 flowers and beyond.; RING-H2 group F1A (RHF1A); FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: regulation of cell cycle, proteasomal protein catabolic process, megagametogenesis, microgametogenesis; LOCATED IN: membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 group F2A (TAIR:AT5G22000.3); Has 5179 Blast hits to 4938 proteins in 253 species: Archae - 0; Bacteria - 16; Metazoa - 1752; Fungi - 320; Plants - 2058; Viruses - 9; Other Eukaryotes - 1024 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative RHF1A, Description = E3 ubiquitin-protein ligase RHF1A, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03706_274834-280677' '(at1g02610 : 120.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT4G02075.1); Has 1637 Blast hits to 1605 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 761; Fungi - 107; Plants - 616; Viruses - 18; Other Eukaryotes - 135 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative BnaA10g01230D, Description = BnaA10g01230D protein, PFAM = PF12906;PF12428)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03738_82905-88589' '(at5g05830 : 159.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G01070.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative BnaCnng61870D, Description = BnaCnng61870D protein, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03751_302262-308574' '(at5g42940 : 310.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G45180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 620.0) & (original description: Putative ZFP1, Description = C3HC4-type RING finger protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03757_161817-168905' '(at5g22000 : 306.0) encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. Double mutant analyses with RHF1a suggests that RHF2a may be involved in targetting ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF2a is expressed in all four floral whorls and is present at ~8-fold higher levels than RHF1a in inflorescences by RT-PCR analyses.; RING-H2 group F2A (RHF2A); FUNCTIONS IN: zinc ion binding; INVOLVED IN: regulation of cell cycle, proteolysis involved in cellular protein catabolic process, megagametogenesis, microgametogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 group F1A (TAIR:AT4G14220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 612.0) & (original description: Putative Os03g0788800, Description = Os03g0788800 protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03757_598839-601345' '(at5g06490 : 134.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G35910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative ATL70, Description = RING-H2 finger protein ATL70, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03757_619559-622080' '(at5g06490 : 125.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G35910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39828 : 80.4) no description available & (reliability: 250.0) & (original description: Putative ATL70, Description = RING-H2 finger protein ATL70, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03764_558157-565064' '(at3g05670 : 261.0) RING/U-box protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein (TAIR:AT1G67180.1); Has 32410 Blast hits to 21304 proteins in 1066 species: Archae - 126; Bacteria - 4266; Metazoa - 11275; Fungi - 4969; Plants - 2419; Viruses - 550; Other Eukaryotes - 8805 (source: NCBI BLink). & (gnl|cdd|39631 : 98.6) no description available & (reliability: 522.0) & (original description: Putative At3g05670, Description = Putative nucleolin-like, PFAM = PF00628;PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03766_1633420-1636154' '(at1g72310 : 80.5) Encodes a putative RING-H2 zinc finger protein ATL3 (ATL3).; ATL3; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G53820.1); Has 10122 Blast hits to 10073 proteins in 295 species: Archae - 0; Bacteria - 0; Metazoa - 2687; Fungi - 787; Plants - 5131; Viruses - 60; Other Eukaryotes - 1457 (source: NCBI BLink). & (gnl|cdd|39828 : 80.0) no description available & (reliability: 161.0) & (original description: Putative PGSC0003DMG400006951, Description = RING-H2 finger protein ATL48, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03817_1363462-1367370' '(at3g48030 : 113.0) hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to hypoxia; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Hypoxia induced protein, conserved region (InterPro:IPR007667); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G23980.1); Has 9958 Blast hits to 9934 proteins in 295 species: Archae - 0; Bacteria - 6; Metazoa - 2435; Fungi - 930; Plants - 5148; Viruses - 46; Other Eukaryotes - 1393 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative higd2a, Description = RING-H2 finger protein ATL48, PFAM = PF04588)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03827_163248-168654' '(at4g33940 : 172.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box protein with domain of unknown function (DUF 1232) (TAIR:AT1G72175.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37375 : 86.6) no description available & (reliability: 344.0) & (original description: Putative At4g33940, Description = Armadillo repeat-containing protein, putative, PFAM = PF13445)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03858_61442-80291' '(at4g00990 : 749.0) Transcription factor jumonji (jmjC) domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, RING-type (InterPro:IPR001841), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G11950.1); Has 966 Blast hits to 671 proteins in 113 species: Archae - 0; Bacteria - 8; Metazoa - 538; Fungi - 54; Plants - 301; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36570 : 327.0) no description available & (reliability: 1498.0) & (original description: Putative BnaC09g13650D, Description = BnaC09g13650D protein, PFAM = PF02373)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03858_61505-80270' '(at4g00990 : 749.0) Transcription factor jumonji (jmjC) domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, RING-type (InterPro:IPR001841), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G11950.1); Has 966 Blast hits to 671 proteins in 113 species: Archae - 0; Bacteria - 8; Metazoa - 538; Fungi - 54; Plants - 301; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36570 : 326.0) no description available & (reliability: 1498.0) & (original description: Putative BnaC09g13650D, Description = BnaC09g13650D protein, PFAM = PF02373)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03904_38632-42046' '(at1g60360 : 133.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G19950.1); Has 9982 Blast hits to 9957 proteins in 273 species: Archae - 0; Bacteria - 6; Metazoa - 2754; Fungi - 1005; Plants - 4741; Viruses - 16; Other Eukaryotes - 1460 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative RCOM_0065560, Description = Zinc finger protein, putative, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03904_39150-42076' '(at1g60360 : 131.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G19950.1); Has 9982 Blast hits to 9957 proteins in 273 species: Archae - 0; Bacteria - 6; Metazoa - 2754; Fungi - 1005; Plants - 4741; Viruses - 16; Other Eukaryotes - 1460 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative RCOM_0065560, Description = Zinc finger protein, putative, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03917_52022-57176' '(at4g33940 : 189.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box protein with domain of unknown function (DUF 1232) (TAIR:AT1G72175.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37375 : 81.2) no description available & (reliability: 378.0) & (original description: Putative BnaC01g04390D, Description = BnaC01g04390D protein, PFAM = PF13445)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03937_291708-296901' '(at1g68180 : 142.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G56580.3); Has 9058 Blast hits to 9033 proteins in 265 species: Archae - 0; Bacteria - 0; Metazoa - 2534; Fungi - 573; Plants - 4692; Viruses - 31; Other Eukaryotes - 1228 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative csu180, Description = Zinc finger, C3HC4 type (RING finger) protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03944_361657-367663' '(at3g55530 : 324.0) Encodes an intracellular membrane localized protein with E3 ligase activity that is involved in regulation of ABA signaling. Loss of function alleles show decreased sensitivity to ABA. Overexpression results in increased sensitivity to ABA.; SALT- AND DROUGHT-INDUCED RING FINGER1 (SDIR1); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G04790.1); Has 9775 Blast hits to 9747 proteins in 287 species: Archae - 0; Bacteria - 6; Metazoa - 2690; Fungi - 760; Plants - 4971; Viruses - 89; Other Eukaryotes - 1259 (source: NCBI BLink). & (reliability: 648.0) & (original description: Putative SDIR1, Description = E3 ubiquitin-protein ligase SDIR1, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03949_818485-820901' '(at4g10160 : 90.1) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G10150.1); Has 9335 Blast hits to 9314 proteins in 290 species: Archae - 0; Bacteria - 6; Metazoa - 2290; Fungi - 731; Plants - 4944; Viruses - 53; Other Eukaryotes - 1311 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative ATL58, Description = BnaA02g23440D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03952_356284-359575' '(at5g53110 : 118.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G46495.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative ATL69, Description = Zinc finger family protein, PFAM = PF13947;PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03959_18547-21044' '(at1g15100 : 152.0) Encodes a putative RING-H2 finger protein RHA2a.; RING-H2 finger A2A (RHA2A); FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: response to salt stress, positive regulation of abscisic acid mediated signaling pathway, regulation of response to osmotic stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger protein 2B (TAIR:AT2G01150.1); Has 8620 Blast hits to 8597 proteins in 260 species: Archae - 0; Bacteria - 0; Metazoa - 2194; Fungi - 672; Plants - 4576; Viruses - 12; Other Eukaryotes - 1166 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative RHA2A, Description = E3 ubiquitin-protein ligase RHA2A, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf03969_502768-522460' '(at2g38970 : 501.0) Zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G54780.1); Has 4418 Blast hits to 4397 proteins in 764 species: Archae - 94; Bacteria - 1613; Metazoa - 1251; Fungi - 170; Plants - 535; Viruses - 5; Other Eukaryotes - 750 (source: NCBI BLink). & (gnl|cdd|29239 : 158.0) no description available & (reliability: 1002.0) & (original description: Putative RZFP6, Description = C3HC4 type zinc finger protein, PFAM = PF00092;PF17123;PF14624)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04003_766146-770850' '(at5g42940 : 86.7) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G45180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative , Description = RING finger protein 165, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04007_385752-390733' '(at1g45180 : 262.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G42940.1); Has 9233 Blast hits to 9191 proteins in 302 species: Archae - 0; Bacteria - 44; Metazoa - 2582; Fungi - 701; Plants - 4328; Viruses - 54; Other Eukaryotes - 1524 (source: NCBI BLink). & (reliability: 524.0) & (original description: Putative Sb09g028550, Description = Putative uncharacterized protein Sb09g028550, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04040_183770-188706' '(at5g10650 : 227.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G24870.2); Has 11297 Blast hits to 9396 proteins in 312 species: Archae - 0; Bacteria - 114; Metazoa - 2874; Fungi - 769; Plants - 4627; Viruses - 60; Other Eukaryotes - 2853 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative At5g10650, Description = At5g10650, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04044_2301817-2306562' '(at5g25560 : 398.0) CHY-type/CTCHY-type/RING-type Zinc finger protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: CHY-type/CTCHY-type/RING-type Zinc finger protein (TAIR:AT5G22920.1). & (gnl|cdd|37151 : 238.0) no description available & (reliability: 796.0) & (original description: Putative MIEL1, Description = E3 ubiquitin-protein ligase MIEL1, PFAM = PF05495;PF13639;PF14599)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04084_396674-411548' '(at3g05870 : 152.0) Subunit of the anaphase promoting complex, a ubiquitin ligase complex that regulates progression through the cell cycle.; anaphase-promoting complex/cyclosome 11 (APC11); FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: regulation of mitotic cell cycle; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING-box 1 (TAIR:AT5G20570.1). & (gnl|cdd|36706 : 131.0) no description available & (gnl|cdd|34793 : 90.5) no description available & (reliability: 304.0) & (original description: Putative APC11, Description = Anaphase-promoting complex subunit 11, PFAM = PF12861)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04107_77613-82656' '(at4g34370 : 597.0) ARIADNE 1 (ARI1); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G16090.1). & (gnl|cdd|37026 : 294.0) no description available & (reliability: 1194.0) & (original description: Putative ARI2, Description = Probable E3 ubiquitin-protein ligase ARI2, PFAM = PF01485;PF01485;PF00097)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04109_94545-100118' '(at2g01275 : 245.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G38070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36822 : 91.2) no description available & (reliability: 490.0) & (original description: Putative LOC100282425, Description = Protein binding protein, PFAM = PF12906;PF12428)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04122_68395-73303' '(at1g61620 : 419.0) phosphoinositide binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Nitric oxide synthase-interacting (InterPro:IPR016818), Zinc finger, RING-type (InterPro:IPR001841); Has 510 Blast hits to 510 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 167; Fungi - 129; Plants - 138; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|38249 : 358.0) no description available & (reliability: 838.0) & (original description: Putative PGSC0003DMG400022347, Description = Nitric oxide synthase-interacting protein homolog, PFAM = PF04641;PF15906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04122_304896-314679' '(at4g00990 : 424.0) Transcription factor jumonji (jmjC) domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, RING-type (InterPro:IPR001841), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G11950.1); Has 966 Blast hits to 671 proteins in 113 species: Archae - 0; Bacteria - 8; Metazoa - 538; Fungi - 54; Plants - 301; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36570 : 247.0) no description available & (reliability: 848.0) & (original description: Putative glysoja_014359, Description = Lysine-specific demethylase 3A-A, PFAM = PF02373;PF08879)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04122_309120-312489' '(at4g00990 : 125.0) Transcription factor jumonji (jmjC) domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, RING-type (InterPro:IPR001841), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G11950.1); Has 966 Blast hits to 671 proteins in 113 species: Archae - 0; Bacteria - 8; Metazoa - 538; Fungi - 54; Plants - 301; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36570 : 104.0) no description available & (reliability: 250.0) & (original description: Putative glysoja_014359, Description = Transcription factor jumonji (JmjC) domain protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04148_1-8926' '(at5g50170 : 1122.0) C2 calcium/lipid-binding and GRAM domain containing protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), GRAM (InterPro:IPR004182), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding and GRAM domain containing protein (TAIR:AT1G03370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36250 : 368.0) no description available & (reliability: 2026.0) & (original description: Putative At5g50170, Description = C2 and GRAM domain-containing protein At5g50170, PFAM = PF02893;PF00168;PF00168;PF16016;PF16016)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04158_364647-367857' '(at4g28890 : 282.0) RING/U-box superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: root stele, root endodermis, hypocotyl, root, primary root differentiation zone; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G20030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 564.0) & (original description: Putative ATL12, Description = Putative RING-H2 finger protein ATL12, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04159_260771-266278' '(gnl|cdd|36316 : 180.0) no description available & (at5g47050 : 124.0) SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: SBP (S-ribonuclease binding protein) family protein (TAIR:AT4G17680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative At1g32740, Description = SBP (S-ribonuclease binding protein) family protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04184_289238-296870' '(at5g60250 : 421.0) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G25370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37023 : 299.0) no description available & (reliability: 842.0) & (original description: Putative BnaAnng36580D, Description = BnaAnng36580D protein, PFAM = PF13456;PF01485;PF01485)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04252_73944-81857' '(at5g63970 : 484.0) Copine (Calcium-dependent phospholipid-binding protein) family; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Copine (InterPro:IPR010734), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: RING domain ligase1 (TAIR:AT3G01650.1); Has 1765 Blast hits to 1760 proteins in 138 species: Archae - 0; Bacteria - 0; Metazoa - 1037; Fungi - 2; Plants - 411; Viruses - 37; Other Eukaryotes - 278 (source: NCBI BLink). & (gnl|cdd|36541 : 308.0) no description available & (gnl|cdd|29232 : 281.0) no description available & (reliability: 968.0) & (original description: Putative At5g63970, Description = Putative uncharacterized protein At5g63970, PFAM = PF07002;PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04259_76429-80322' '(at5g14420 : 448.0) RING domain ligase2 (RGLG2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Copine (InterPro:IPR010734), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: RING domain ligase1 (TAIR:AT3G01650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36541 : 314.0) no description available & (gnl|cdd|29232 : 278.0) no description available & (reliability: 896.0) & (original description: Putative RGLG, Description = E3 ubiquitin-protein ligase RGLG, PFAM = PF07002)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04259_76432-79412' '(at5g14420 : 433.0) RING domain ligase2 (RGLG2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Copine (InterPro:IPR010734), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: RING domain ligase1 (TAIR:AT3G01650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36541 : 314.0) no description available & (gnl|cdd|29232 : 277.0) no description available & (reliability: 866.0) & (original description: Putative v1g239331, Description = Predicted protein, PFAM = PF07002)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04292_1118023-1120943' '(at1g55530 : 292.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G13430.3); Has 11045 Blast hits to 10950 proteins in 292 species: Archae - 0; Bacteria - 8; Metazoa - 3210; Fungi - 1082; Plants - 5106; Viruses - 41; Other Eukaryotes - 1598 (source: NCBI BLink). & (reliability: 584.0) & (original description: Putative RZFP9, Description = C3HC4 type zinc finger protein, PFAM = PF14369;PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04337_29905-33282' '(at4g28890 : 279.0) RING/U-box superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: root stele, root endodermis, hypocotyl, root, primary root differentiation zone; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G20030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 558.0) & (original description: Putative ATL42, Description = E3 ubiquitin-protein ligase ATL42, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04361_17827-31020' '(at2g30580 : 398.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 2 (DRIP2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 1 (TAIR:AT1G06770.1); Has 1631 Blast hits to 1626 proteins in 163 species: Archae - 0; Bacteria - 2; Metazoa - 1227; Fungi - 58; Plants - 232; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|37871 : 128.0) no description available & (reliability: 796.0) & (original description: Putative DRIP1, Description = E3 ubiquitin protein ligase DRIP1, PFAM = PF13923)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04414_56033-65317' '(at5g60580 : 434.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G09760.1); Has 1580 Blast hits to 1234 proteins in 158 species: Archae - 0; Bacteria - 10; Metazoa - 420; Fungi - 112; Plants - 626; Viruses - 18; Other Eukaryotes - 394 (source: NCBI BLink). & (gnl|cdd|36822 : 103.0) no description available & (reliability: 868.0) & (original description: Putative BnaA02g06200D, Description = BnaA02g06200D protein, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04431_415331-419517' '(at3g48030 : 114.0) hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to hypoxia; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Hypoxia induced protein, conserved region (InterPro:IPR007667); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G23980.1); Has 9958 Blast hits to 9934 proteins in 295 species: Archae - 0; Bacteria - 6; Metazoa - 2435; Fungi - 930; Plants - 5148; Viruses - 46; Other Eukaryotes - 1393 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative At3g48030, Description = Putative uncharacterized protein At3g48030, PFAM = PF04588)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04433_129823-137459' '(at1g54150 : 298.0) E3 Ubiquitin ligase family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), E3 Ubiquitin ligase (InterPro:IPR022170); BEST Arabidopsis thaliana protein match is: E3 Ubiquitin ligase family protein (TAIR:AT1G59560.1); Has 1960 Blast hits to 1959 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 1182; Fungi - 34; Plants - 350; Viruses - 140; Other Eukaryotes - 254 (source: NCBI BLink). & (gnl|cdd|36784 : 125.0) no description available & (reliability: 596.0) & (original description: Putative SPL2, Description = E3 ubiquitin-protein ligase SPL2, PFAM = PF13920;PF12483)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04455_275280-278461' '(at1g72200 : 246.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G22500.1); Has 9343 Blast hits to 9316 proteins in 282 species: Archae - 0; Bacteria - 4; Metazoa - 2295; Fungi - 806; Plants - 4899; Viruses - 51; Other Eukaryotes - 1288 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative ATL11, Description = RING-H2 finger protein ATL11, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04499_76519-79758' '(at3g12920 : 207.0) SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G79110.2); Has 1634 Blast hits to 1631 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 874; Fungi - 0; Plants - 566; Viruses - 36; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|36316 : 160.0) no description available & (reliability: 414.0) & (original description: Putative BRG3, Description = Probable BOI-related E3 ubiquitin-protein ligase 3, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04558_370311-373258' '(at2g40830 : 254.0) Encodes a putative RING-H2 finger protein RHC1a.; RING-H2 finger C1A (RHC1A); FUNCTIONS IN: zinc ion binding; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G56580.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 508.0) & (original description: Putative RHC1A, Description = Probable E3 ubiquitin-protein ligase RHC1A, PFAM = PF13639;PF14369)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04567_237691-297822' '(at5g23110 : 5585.0) Zinc finger, C3HC4 type (RING finger) family protein; FUNCTIONS IN: zinc ion binding, ATP binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Transmembrane Fragile-X-F-associated protein (TAIR:AT1G73950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 11170.0) & (original description: Putative BnaC07g49770D, Description = BnaC07g49770D protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04567_264814-288670' '(at5g23110 : 1815.0) Zinc finger, C3HC4 type (RING finger) family protein; FUNCTIONS IN: zinc ion binding, ATP binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Transmembrane Fragile-X-F-associated protein (TAIR:AT1G73950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 3630.0) & (original description: Putative At5g23110, Description = Sacsin, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04643_491160-511115' '(at5g03450 : 462.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03750.1); Has 6680 Blast hits to 3674 proteins in 290 species: Archae - 4; Bacteria - 114; Metazoa - 3367; Fungi - 525; Plants - 736; Viruses - 186; Other Eukaryotes - 1748 (source: NCBI BLink). & (gnl|cdd|36858 : 234.0) no description available & (reliability: 924.0) & (original description: Putative BnaAnng00650D, Description = BnaAnng00650D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04663_376289-385242' '(at4g32600 : 424.0) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: protein binding, zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT1G80400.1); Has 7180 Blast hits to 7160 proteins in 223 species: Archae - 0; Bacteria - 6; Metazoa - 2398; Fungi - 545; Plants - 2870; Viruses - 33; Other Eukaryotes - 1328 (source: NCBI BLink). & (reliability: 848.0) & (original description: Putative BnaC01g05880D, Description = BnaC01g05880D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04713_93839-96906' '(at5g17600 : 209.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G03550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 418.0) & (original description: Putative Os04g0590900, Description = E3 ubiquitin-protein ligase Os04g0590900, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04739_84380-88050' '(at5g55970 : 364.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G26580.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 728.0) & (original description: Putative At4g26580, Description = Os01g0703300 protein, PFAM = PF17123)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04765_284008-291155' '(at3g47160 : 311.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G58787.1). & (gnl|cdd|36257 : 129.0) no description available & (reliability: 622.0) & (original description: Putative ubl, Description = RING finger protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04781_10925-24535' '(at5g48655 : 145.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G07200.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative BnaC07g26650D, Description = BnaC07g26650D protein, PFAM = PF13923)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04782_88230-100488' '(at2g23140 : 796.0) RING/U-box superfamily protein with ARM repeat domain; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G67340.1). & (q64ha9|spl11_orysa : 223.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|39425 : 97.8) no description available & (gnl|cdd|47808 : 94.9) no description available & (reliability: 1592.0) & (original description: Putative PUB4, Description = U-box domain-containing protein 4, PFAM = PF00514;PF00514;PF00514;PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04793_34080-37300' '(at3g58030 : 253.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G42030.1). & (gnl|cdd|36041 : 147.0) no description available & (reliability: 506.0) & (original description: Putative BnaA07g37970D, Description = BnaA07g37970D protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04801_88562-99525' '(at3g47990 : 518.0) SUGAR-INSENSITIVE 3 (SIS3); FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: sugar mediated signaling pathway; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G66070.1); Has 9412 Blast hits to 9385 proteins in 270 species: Archae - 0; Bacteria - 0; Metazoa - 2601; Fungi - 698; Plants - 4895; Viruses - 18; Other Eukaryotes - 1200 (source: NCBI BLink). & (reliability: 1036.0) & (original description: Putative SIS3, Description = E3 ubiquitin-protein ligase SIS3, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04902_16565-22583' '(at4g36550 : 365.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G67530.2); Has 2348 Blast hits to 2266 proteins in 141 species: Archae - 0; Bacteria - 20; Metazoa - 120; Fungi - 34; Plants - 2017; Viruses - 3; Other Eukaryotes - 154 (source: NCBI BLink). & (q64ha9|spl11_orysa : 93.6) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 88.4) no description available & (reliability: 730.0) & (original description: Putative bg55, Description = Bg55 protein, PFAM = PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04918_817687-1159823' '(at5g05810 : 212.0) ATL43; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G20030.1); Has 8903 Blast hits to 8881 proteins in 285 species: Archae - 0; Bacteria - 2; Metazoa - 2283; Fungi - 641; Plants - 4839; Viruses - 72; Other Eukaryotes - 1066 (source: NCBI BLink). & (reliability: 424.0) & (original description: Putative ATL43, Description = RING-H2 finger protein ATL43, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04921_108119-110640' '(at2g35910 : 155.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G06490.1); Has 8225 Blast hits to 8203 proteins in 288 species: Archae - 0; Bacteria - 0; Metazoa - 1997; Fungi - 507; Plants - 4688; Viruses - 66; Other Eukaryotes - 967 (source: NCBI BLink). & (gnl|cdd|39828 : 85.1) no description available & (reliability: 310.0) & (original description: Putative ATL71, Description = Putative RING-H2 finger protein ATL71, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04950_797864-801060' '(at4g33565 : 130.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G72220.1); Has 9700 Blast hits to 9677 proteins in 303 species: Archae - 0; Bacteria - 6; Metazoa - 2357; Fungi - 776; Plants - 5096; Viruses - 103; Other Eukaryotes - 1362 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative ATL54, Description = RING-H2 finger protein ATL54, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf04995_292724-298491' '(at1g45976 : 333.0) S-ribonuclease binding protein 1 (SBP1); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: SBP (S-ribonuclease binding protein) family protein (TAIR:AT1G60610.3); Has 1148 Blast hits to 1148 proteins in 158 species: Archae - 2; Bacteria - 4; Metazoa - 532; Fungi - 2; Plants - 446; Viruses - 53; Other Eukaryotes - 109 (source: NCBI BLink). & (gnl|cdd|36316 : 166.0) no description available & (reliability: 666.0) & (original description: Putative sbp1, Description = S-ribonuclease binding protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05108_438637-441095' '(at2g04240 : 141.0) Encodes a small protein with an N-terminal trans-membrane domain and a RING-H2 zinc finger motif located at the C-terminus. Gene expression is induced by salt and osmotic stress. Transcrips levels are induced by DELLA proteins and repressed by gibberellic acid. Involved in ABA metabolism.; XERICO; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: brassinosteroid-responsive RING-H2 (TAIR:AT3G61460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative XERICO, Description = Probable E3 ubiquitin-protein ligase XERICO, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05123_89268-92510' '(at3g14250 : 255.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: egg cell; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G53690.1); Has 3093 Blast hits to 3074 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 1283; Fungi - 653; Plants - 677; Viruses - 1; Other Eukaryotes - 479 (source: NCBI BLink). & (gnl|cdd|37023 : 142.0) no description available & (reliability: 510.0) & (original description: Putative At3g14250, Description = RING/U-box superfamily protein, PFAM = PF01485;PF01485)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05123_191632-194541' '(at3g53690 : 94.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G14250.1); Has 3158 Blast hits to 3141 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 1307; Fungi - 709; Plants - 671; Viruses - 0; Other Eukaryotes - 471 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative PGSC0003DMG400034504, Description = , PFAM = PF01485)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05173_66181-80882' '(at3g60300 : 293.0) RWD domain-containing protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Zinc finger, RING-type (InterPro:IPR001841), RWD (InterPro:IPR006575). & (gnl|cdd|39646 : 83.6) no description available & (reliability: 586.0) & (original description: Putative BnaC04g22170D, Description = BnaC04g22170D protein, PFAM = PF05773)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05175_367621-377514' '(at1g68820 : 576.0) Transmembrane Fragile-X-F-associated protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane Fragile-X-F-associated protein (InterPro:IPR019396), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Transmembrane Fragile-X-F-associated protein (TAIR:AT1G73950.1); Has 2761 Blast hits to 2715 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 1602; Fungi - 4; Plants - 542; Viruses - 213; Other Eukaryotes - 400 (source: NCBI BLink). & (reliability: 1152.0) & (original description: Putative At1g68820, Description = Putative uncharacterized protein At1g68820, PFAM = PF10269;PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05226_527357-529902' '(at1g20823 : 154.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G76410.1); Has 9063 Blast hits to 9039 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 2341; Fungi - 637; Plants - 4964; Viruses - 26; Other Eukaryotes - 1095 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative ATL8, Description = RING-H2 finger protein ATL8, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05230_142089-151962' '(at5g14420 : 563.0) RING domain ligase2 (RGLG2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Copine (InterPro:IPR010734), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: RING domain ligase1 (TAIR:AT3G01650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36541 : 328.0) no description available & (gnl|cdd|29232 : 274.0) no description available & (reliability: 1126.0) & (original description: Putative RGLG2, Description = E3 ubiquitin-protein ligase RGLG2, PFAM = PF07002;PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05296_44459-64958' '(at2g39810 : 859.0) A novel protein with a RING finger motif near the amino terminus. Negative regulator of cold responses. Functions as an E3 ligase required for the ubiquitination of ICE1. HOS1 physically interacts with ICE1 and mediates the ubiquitination of ICE1 both in vitro and in vivo. Overexpression represses the expression of CBFs and their downstream genes and confers increased sensitivity to freezing stress.; HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (HOS1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: response to cold, negative regulation of transcription, protein ubiquitination; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; Has 239 Blast hits to 237 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 0; Plants - 80; Viruses - 5; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 1718.0) & (original description: Putative HOS1, Description = E3 ubiquitin-protein ligase HOS1, PFAM = PF13934)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05301_638429-643202' '(at4g03000 : 443.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G03365.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 886.0) & (original description: Putative BnaA09g01220D, Description = BnaA09g01220D protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05306_422535-426475' '(at5g02750 : 152.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G19950.1); Has 8586 Blast hits to 8564 proteins in 268 species: Archae - 0; Bacteria - 6; Metazoa - 2607; Fungi - 605; Plants - 4117; Viruses - 22; Other Eukaryotes - 1229 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative SGR9, Description = E3 ubiquitin-protein ligase SGR9, amyloplastic, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05319_516343-534172' '(at3g06140 : 308.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G19080.1); Has 7743 Blast hits to 5478 proteins in 376 species: Archae - 2; Bacteria - 144; Metazoa - 2405; Fungi - 531; Plants - 3352; Viruses - 272; Other Eukaryotes - 1037 (source: NCBI BLink). & (gnl|cdd|39466 : 266.0) no description available & (reliability: 616.0) & (original description: Putative LUL2, Description = Probable E3 ubiquitin-protein ligase LUL2, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05324_274480-279920' '(at3g47160 : 232.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G58787.1). & (reliability: 464.0) & (original description: Putative ubl, Description = RING finger protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05324_389110-394897' '(at1g24440 : 338.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G13195.1); Has 869 Blast hits to 869 proteins in 155 species: Archae - 0; Bacteria - 0; Metazoa - 288; Fungi - 71; Plants - 339; Viruses - 31; Other Eukaryotes - 140 (source: NCBI BLink). & (gnl|cdd|36257 : 94.4) no description available & (reliability: 676.0) & (original description: Putative ubl, Description = E3 ubiquitin ligase, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05349_268842-273464' '(at4g10160 : 136.0) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G10150.1); Has 9335 Blast hits to 9314 proteins in 290 species: Archae - 0; Bacteria - 6; Metazoa - 2290; Fungi - 731; Plants - 4944; Viruses - 53; Other Eukaryotes - 1311 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative ATL7, Description = RING-H2 zinc finger protein RHA4a, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05440_465327-468040' '(at4g03510 : 140.0) RMA1 encodes a novel 28 kDa protein with a RING finger motif and a C-terminal membrane-anchoring domain that is involved in the secretory pathway. Has E3 ubiquitin ligase activity.; RING membrane-anchor 1 (RMA1); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING membrane-anchor 2 (TAIR:AT4G28270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36041 : 135.0) no description available & (reliability: 280.0) & (original description: Putative RMA1H1, Description = E3 ubiquitin-protein ligase RMA1H1, PFAM = PF00097)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05486_193418-199426' '(at5g60580 : 376.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G09760.1); Has 1580 Blast hits to 1234 proteins in 158 species: Archae - 0; Bacteria - 10; Metazoa - 420; Fungi - 112; Plants - 626; Viruses - 18; Other Eukaryotes - 394 (source: NCBI BLink). & (gnl|cdd|36822 : 109.0) no description available & (reliability: 752.0) & (original description: Putative BnaA02g06200D, Description = BnaA02g06200D protein, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05486_238398-248918' '(at3g09770 : 357.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G03200.1); Has 7619 Blast hits to 4715 proteins in 450 species: Archae - 8; Bacteria - 442; Metazoa - 2165; Fungi - 884; Plants - 2938; Viruses - 368; Other Eukaryotes - 814 (source: NCBI BLink). & (gnl|cdd|39466 : 334.0) no description available & (reliability: 714.0) & (original description: Putative LOG2, Description = Probable E3 ubiquitin-protein ligase LOG2, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05551_37871-45741' '(at1g10650 : 254.0) SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: SBP (S-ribonuclease binding protein) family protein (TAIR:AT1G60610.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36316 : 152.0) no description available & (reliability: 508.0) & (original description: Putative At1g10650, Description = Putative S-ribonuclease binding protein SBP1, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05554_116689-129651' '(at2g44950 : 669.0) The gene encodes one of two orthologous E3 ubiquitin ligases in Arabidopsis that are involved in monoubiquitination of histone H2B.; histone mono-ubiquitination 1 (HUB1); FUNCTIONS IN: ubiquitin-protein ligase activity, protein homodimerization activity, zinc ion binding; INVOLVED IN: in 10 processes; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: histone mono-ubiquitination 2 (TAIR:AT1G55250.1); Has 39567 Blast hits to 24086 proteins in 1905 species: Archae - 719; Bacteria - 4806; Metazoa - 20260; Fungi - 3821; Plants - 2415; Viruses - 125; Other Eukaryotes - 7421 (source: NCBI BLink). & (gnl|cdd|36196 : 264.0) no description available & (reliability: 1338.0) & (original description: Putative HUB1, Description = E3 ubiquitin-protein ligase BRE1-like 1, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05588_372983-377865' '(at5g22000 : 318.0) encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. Double mutant analyses with RHF1a suggests that RHF2a may be involved in targetting ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF2a is expressed in all four floral whorls and is present at ~8-fold higher levels than RHF1a in inflorescences by RT-PCR analyses.; RING-H2 group F2A (RHF2A); FUNCTIONS IN: zinc ion binding; INVOLVED IN: regulation of cell cycle, proteolysis involved in cellular protein catabolic process, megagametogenesis, microgametogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 group F1A (TAIR:AT4G14220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative RHF2A, Description = E3 ubiquitin-protein ligase RHF2A, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05617_135063-142901' '(at1g20780 : 217.0) Encodes a protein containing a U-box and an ARM domain.; senescence-associated E3 ubiquitin ligase 1 (SAUL1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of chlorophyll catabolic process, regulation of chlorophyll biosynthetic process, leaf senescence, regulation of abscisic acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G76390.2); Has 2790 Blast hits to 2660 proteins in 201 species: Archae - 0; Bacteria - 20; Metazoa - 434; Fungi - 161; Plants - 1969; Viruses - 3; Other Eukaryotes - 203 (source: NCBI BLink). & (gnl|cdd|47808 : 85.3) no description available & (reliability: 418.0) & (original description: Putative glysoja_015640, Description = U-box domain-containing protein 43, PFAM = PF05659;PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05664_468466-476218' '(at5g45290 : 127.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT4G11680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39828 : 83.1) no description available & (reliability: 254.0) & (original description: Putative glysoja_022438, Description = RING-H2 finger protein ATL65, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05664_493787-499474' '(at2g15580 : 90.5) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 181.0) & (original description: Putative PGSC0003DMG400030735, Description = , PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05690_39411-45669' '(at4g39140 : 256.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G21500.1); Has 1557 Blast hits to 280 proteins in 56 species: Archae - 0; Bacteria - 6; Metazoa - 62; Fungi - 44; Plants - 176; Viruses - 0; Other Eukaryotes - 1269 (source: NCBI BLink). & (reliability: 512.0) & (original description: Putative BnaA01g05370D, Description = BnaA01g05370D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05720_637262-643723' '(at2g42160 : 463.0) BRAP2 RING ZnF UBP domain-containing protein 1 (BRIZ1); FUNCTIONS IN: catalytic activity, zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BRCA1-associated 2 (InterPro:IPR011422), Zinc finger, UBP-type (InterPro:IPR001607), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT2G26000.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36022 : 402.0) no description available & (gnl|cdd|71023 : 89.6) no description available & (reliability: 926.0) & (original description: Putative BRIZ1, Description = BRIZ1, PFAM = PF07576;PF02148)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05749_300593-305671' '(at1g49850 : 115.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G15580.1); Has 9155 Blast hits to 9129 proteins in 266 species: Archae - 0; Bacteria - 4; Metazoa - 2526; Fungi - 625; Plants - 4723; Viruses - 8; Other Eukaryotes - 1269 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative RHY1A, Description = Probable E3 ubiquitin-protein ligase RHY1A, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05836_613915-623337' '(at5g05830 : 191.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G01070.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative BnaC09g49660D, Description = BnaC09g49660D protein, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05869_12881-19421' '(at1g02860 : 401.0) Encodes a likely ubiquitin E3 ligase with RING and SPX domains that is involved in mediating immune responses. Targeted by MIR827.; nitrogen limitation adaptation (NLA); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related (TAIR:AT2G38920.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66759 : 85.1) no description available & (reliability: 802.0) & (original description: Putative BAH1, Description = E3 ubiquitin-protein ligase BAH1, PFAM = PF00097)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05942_161137-169725' '(at1g74770 : 740.0) zinc ion binding; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Haemerythrin/HHE cation-binding motif (InterPro:IPR012312); BEST Arabidopsis thaliana protein match is: zinc ion binding;zinc ion binding (TAIR:AT1G18910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1430.0) & (original description: Putative PGSC0003DMG400013184, Description = Putative RING finger protein C2F3.16, PFAM = PF05495;PF01814)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05955_26105-31740' '(at1g20780 : 141.0) Encodes a protein containing a U-box and an ARM domain.; senescence-associated E3 ubiquitin ligase 1 (SAUL1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of chlorophyll catabolic process, regulation of chlorophyll biosynthetic process, leaf senescence, regulation of abscisic acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G76390.2); Has 2790 Blast hits to 2660 proteins in 201 species: Archae - 0; Bacteria - 20; Metazoa - 434; Fungi - 161; Plants - 1969; Viruses - 3; Other Eukaryotes - 203 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative Sb03g045700, Description = Putative uncharacterized protein Sb03g045700, PFAM = PF05804)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05998_59659-68576' '(at1g32340 : 702.0) Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression is not detected under normal conditions and in response to cucumber mosaic virus or spermine.; NDR1/HIN1-like 8 (NHL8); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), RWD (InterPro:IPR006575); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G14250.1); Has 3653 Blast hits to 3199 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 1736; Fungi - 604; Plants - 670; Viruses - 7; Other Eukaryotes - 636 (source: NCBI BLink). & (gnl|cdd|37025 : 340.0) no description available & (reliability: 1404.0) & (original description: Putative Sb06g027130, Description = Putative uncharacterized protein Sb06g027130, PFAM = PF01485;PF01485;PF05773)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf05998_300893-303861' '(at4g17920 : 135.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G46650.1); Has 8779 Blast hits to 8757 proteins in 280 species: Archae - 0; Bacteria - 0; Metazoa - 2402; Fungi - 735; Plants - 4417; Viruses - 37; Other Eukaryotes - 1188 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative Csa_3G901170, Description = RING-H2 finger protein ATL29, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06023_88074-98313' '(at5g01960 : 550.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G65040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39838 : 165.0) no description available & (reliability: 1100.0) & (original description: Putative RNF1, Description = RING finger protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06023_90931-93659' '(at5g01960 : 190.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G65040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 380.0) & (original description: Putative RNF1, Description = RING finger and transmembrane domain-containing protein 2, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06087_143235-145939' '(at1g49230 : 204.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G49200.1); Has 9168 Blast hits to 9144 proteins in 279 species: Archae - 0; Bacteria - 0; Metazoa - 2452; Fungi - 610; Plants - 4926; Viruses - 41; Other Eukaryotes - 1139 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative ATL78, Description = RING-H2 finger protein ATL78, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06090_28935-33710' '(at1g71020 : 590.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G23030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q64ha9|spl11_orysa : 415.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|39425 : 99.0) no description available & (gnl|cdd|47808 : 94.2) no description available & (reliability: 1180.0) & (original description: Putative LOC100193248, Description = Putative ARM repeat-containing protein containing family protein, PFAM = PF04564;PF00514;PF00514)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06106_126924-130424' '(at4g35070 : 154.0) SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: S-ribonuclease binding protein 1 (TAIR:AT1G45976.1); Has 698 Blast hits to 689 proteins in 99 species: Archae - 0; Bacteria - 9; Metazoa - 204; Fungi - 4; Plants - 376; Viruses - 12; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|36316 : 111.0) no description available & (reliability: 308.0) & (original description: Putative At4g35070, Description = SBP (S-ribonuclease binding protein) family protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06123_32416-40953' '(at2g15530 : 81.3) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34040.1). & (reliability: 162.6) & (original description: Putative , Description = , PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06154_173346-178205' '(at4g10150 : 147.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G10160.1); Has 9409 Blast hits to 9387 proteins in 290 species: Archae - 0; Bacteria - 6; Metazoa - 2329; Fungi - 766; Plants - 4947; Viruses - 49; Other Eukaryotes - 1312 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative BnaA02g23440D, Description = BnaA02g23440D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06164_5219-7647' '(gnl|cdd|39828 : 83.1) no description available & (at1g23980 : 80.1) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G40250.1); Has 9283 Blast hits to 9263 proteins in 297 species: Archae - 0; Bacteria - 6; Metazoa - 2141; Fungi - 689; Plants - 5036; Viruses - 72; Other Eukaryotes - 1339 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative PGSC0003DMG400024595, Description = Zinc finger, RING/FYVE/PHD-type, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06170_71771-75021' '(at3g18930 : 204.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G03550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative ATL65, Description = RING-H2 finger protein ATL65, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06187_182365-194283' '(at3g26730 : 526.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); Has 5292 Blast hits to 2238 proteins in 281 species: Archae - 3; Bacteria - 121; Metazoa - 1602; Fungi - 487; Plants - 437; Viruses - 6; Other Eukaryotes - 2636 (source: NCBI BLink). & (gnl|cdd|37375 : 151.0) no description available & (reliability: 1052.0) & (original description: Putative BnaA02g28190D, Description = BnaA02g28190D protein, PFAM = PF00097)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06249_56921-70907' '(at3g47550 : 248.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to salt stress; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G62460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36822 : 150.0) no description available & (reliability: 496.0) & (original description: Putative ZFP1, Description = Zinc finger protein, PFAM = PF12906;PF12428)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06249_60240-69434' '(at2g02960 : 141.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G14260.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36822 : 81.2) no description available & (reliability: 282.0) & (original description: Putative At1g14260, Description = RING/FYVE/PHD zinc finger-containing protein, PFAM = PF12428)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06249_599428-602331' '(at3g14250 : 189.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: egg cell; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G53690.1); Has 3093 Blast hits to 3074 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 1283; Fungi - 653; Plants - 677; Viruses - 1; Other Eukaryotes - 479 (source: NCBI BLink). & (gnl|cdd|37023 : 128.0) no description available & (reliability: 378.0) & (original description: Putative Os09g0420000, Description = Putative ovule protein, PFAM = PF01485;PF01485)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06249_652127-655057' '(at3g14250 : 157.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: egg cell; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G53690.1); Has 3093 Blast hits to 3074 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 1283; Fungi - 653; Plants - 677; Viruses - 1; Other Eukaryotes - 479 (source: NCBI BLink). & (gnl|cdd|37023 : 131.0) no description available & (reliability: 314.0) & (original description: Putative LOC100381983, Description = Putative E3 ubiquitin-protein ligase RNF144A, PFAM = PF01485;PF01485)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06280_627168-630595' '(at5g40140 : 395.0) RING/U-box superfamily protein with ARM repeat domain; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex, chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 38 (TAIR:AT5G65200.1); Has 3757 Blast hits to 2892 proteins in 207 species: Archae - 0; Bacteria - 10; Metazoa - 408; Fungi - 448; Plants - 2529; Viruses - 0; Other Eukaryotes - 362 (source: NCBI BLink). & (q64ha9|spl11_orysa : 131.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 790.0) & (original description: Putative PUB40, Description = U-box domain-containing protein 40, PFAM = PF04564;PF00514;PF00514)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06291_359143-373457' '(at3g45630 : 368.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|37279 : 222.0) no description available & (gnl|cdd|34774 : 220.0) no description available & (reliability: 736.0) & (original description: Putative BnaC03g55430D, Description = BnaC03g55430D protein, PFAM = PF00076;PF14570)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06305_105820-122309' '(at3g06330 : 347.0) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G18760.1); Has 1679 Blast hits to 1519 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 662; Fungi - 124; Plants - 642; Viruses - 4; Other Eukaryotes - 247 (source: NCBI BLink). & (gnl|cdd|36822 : 109.0) no description available & (reliability: 694.0) & (original description: Putative RZFP5, Description = C3HC4 type zinc finger protein, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06305_113740-123072' '(at3g06330 : 350.0) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G18760.1); Has 1679 Blast hits to 1519 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 662; Fungi - 124; Plants - 642; Viruses - 4; Other Eukaryotes - 247 (source: NCBI BLink). & (gnl|cdd|36822 : 108.0) no description available & (reliability: 700.0) & (original description: Putative RZFP5, Description = C3HC4 type zinc finger protein, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06344_155555-166258' '(at4g34100 : 1489.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT4G32670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34782 : 137.0) no description available & (gnl|cdd|36822 : 92.0) no description available & (reliability: 2978.0) & (original description: Putative SUD1, Description = Probable E3 ubiquitin ligase SUD1, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06348_31141-34882' '(at1g04360 : 86.7) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G43420.1); Has 9268 Blast hits to 9239 proteins in 300 species: Archae - 0; Bacteria - 0; Metazoa - 2276; Fungi - 656; Plants - 4907; Viruses - 85; Other Eukaryotes - 1344 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative glysoja_005127, Description = E3 ubiquitin-protein ligase ATL59, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06388_261065-264375' '(at5g08139 : 155.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G60820.1); Has 9271 Blast hits to 9218 proteins in 288 species: Archae - 4; Bacteria - 19; Metazoa - 2506; Fungi - 730; Plants - 4517; Viruses - 59; Other Eukaryotes - 1436 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative RING1, Description = E3 ubiquitin-protein ligase RING1, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06441_165793-171073' '(at1g08050 : 140.0) Zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Zinc finger (C3HC4-type RING finger) family protein (TAIR:AT5G60710.1); Has 3591 Blast hits to 3577 proteins in 633 species: Archae - 55; Bacteria - 1268; Metazoa - 812; Fungi - 224; Plants - 715; Viruses - 5; Other Eukaryotes - 512 (source: NCBI BLink). & (gnl|cdd|29239 : 101.0) no description available & (reliability: 280.0) & (original description: Putative Sb02g020450, Description = Putative uncharacterized protein Sb02g020450, PFAM = PF13639;PF13519)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06463_45701-57610' '(at2g18670 : 85.1) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G30370.1); Has 8378 Blast hits to 8356 proteins in 272 species: Archae - 0; Bacteria - 0; Metazoa - 2196; Fungi - 602; Plants - 4554; Viruses - 20; Other Eukaryotes - 1006 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative PGSC0003DMG400027445, Description = Zinc finger, RING/FYVE/PHD-type, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06556_1064139-1067044' '(at3g16720 : 184.0) RING-H2 protein induced after exposure to chitin or inactivated crude cellulase preparations.; TOXICOS EN LEVADURA 2 (ATL2); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin, defense response; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G15975.1); Has 9711 Blast hits to 9689 proteins in 300 species: Archae - 0; Bacteria - 2; Metazoa - 2552; Fungi - 813; Plants - 5050; Viruses - 85; Other Eukaryotes - 1209 (source: NCBI BLink). & (q9lrb7|el5_orysa : 86.7) E3 ubiquitin-protein ligase EL5 (EC 6.3.2.-) - Oryza sativa (Rice) & (reliability: 368.0) & (original description: Putative ATL2, Description = RING-H2 finger protein ATL2, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06560_183471-189120' '(at5g15790 : 211.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G02290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative At3g02290, Description = E3 ubiquitin-protein ligase At3g02290, PFAM = PF12678)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06590_76568-82801' '(at3g45630 : 265.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|34774 : 133.0) no description available & (gnl|cdd|37279 : 131.0) no description available & (reliability: 530.0) & (original description: Putative BnaC03g55430D, Description = BnaC03g55430D protein, PFAM = PF14570)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06590_76604-87881' '(at3g45630 : 674.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|37279 : 244.0) no description available & (gnl|cdd|34774 : 217.0) no description available & (reliability: 1348.0) & (original description: Putative v1g104011, Description = Predicted protein, PFAM = PF14570;PF00076)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06674_576153-580057' '(at5g38895 : 221.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G15790.2). & (reliability: 442.0) & (original description: Putative At3g02290, Description = E3 ubiquitin-protein ligase At3g02290, PFAM = PF12678)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06716_181284-188661' '(at1g68070 : 261.0) Zinc finger, C3HC4 type (RING finger) family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-finger protein for embryogenesis (TAIR:AT2G01735.1); Has 10060 Blast hits to 10035 proteins in 290 species: Archae - 0; Bacteria - 6; Metazoa - 2675; Fungi - 773; Plants - 5064; Viruses - 53; Other Eukaryotes - 1489 (source: NCBI BLink). & (reliability: 522.0) & (original description: Putative RIE1, Description = E3 ubiquitin protein ligase RIE1, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06736_434134-443474' '(at1g01350 : 396.0) Zinc finger (CCCH-type/C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type/C3HC4-type RING finger) family protein (TAIR:AT5G06420.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37024 : 240.0) no description available & (gnl|cdd|34753 : 121.0) no description available & (reliability: 792.0) & (original description: Putative mdlc, Description = RING finger protein 113A, PFAM = PF00642;PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06752_32761-39919' '(at5g19430 : 178.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G12310.1). & (reliability: 356.0) & (original description: Putative BnaA03g07590D, Description = BnaA03g07590D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06772_109865-112812' '(gnl|cdd|71240 : 219.0) no description available & (at4g08460 : 216.0) FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1644) (TAIR:AT1G77770.1). & (reliability: 432.0) & (original description: Putative BnaA02g27710D, Description = BnaA02g27710D protein, PFAM = PF07800)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06812_18370-21029' '(at2g23780 : 168.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G19310.1); Has 3846 Blast hits to 3838 proteins in 274 species: Archae - 0; Bacteria - 0; Metazoa - 2175; Fungi - 493; Plants - 714; Viruses - 21; Other Eukaryotes - 443 (source: NCBI BLink). & (gnl|cdd|36041 : 160.0) no description available & (reliability: 336.0) & (original description: Putative DTR1, Description = RING type E3 ligase, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06939_300043-303134' '(at5g17600 : 149.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G03550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative ATL55, Description = RING-H2 finger protein ATL54, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06955_153653-179030' '(at4g00990 : 616.0) Transcription factor jumonji (jmjC) domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, RING-type (InterPro:IPR001841), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G11950.1); Has 966 Blast hits to 671 proteins in 113 species: Archae - 0; Bacteria - 8; Metazoa - 538; Fungi - 54; Plants - 301; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36570 : 355.0) no description available & (reliability: 1232.0) & (original description: Putative Sb01g015210, Description = Putative uncharacterized protein Sb01g015210, PFAM = PF02373)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06974_14877-18037' '(at5g40250 : 318.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G23980.1); Has 9426 Blast hits to 9402 proteins in 296 species: Archae - 0; Bacteria - 0; Metazoa - 2235; Fungi - 712; Plants - 5071; Viruses - 76; Other Eukaryotes - 1332 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative ATL46, Description = RING-H2 finger protein ATL46, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06996_132275-137832' '(at3g05670 : 261.0) RING/U-box protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein (TAIR:AT1G67180.1); Has 32410 Blast hits to 21304 proteins in 1066 species: Archae - 126; Bacteria - 4266; Metazoa - 11275; Fungi - 4969; Plants - 2419; Viruses - 550; Other Eukaryotes - 8805 (source: NCBI BLink). & (gnl|cdd|39631 : 97.4) no description available & (reliability: 522.0) & (original description: Putative BnaA03g29120D, Description = Putative nucleolin-like, PFAM = PF00628;PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf06999_254030-258294' '(at5g22920 : 162.0) CHY-type/CTCHY-type/RING-type Zinc finger protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: CHY-type/CTCHY-type/RING-type Zinc finger protein (TAIR:AT5G25560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37151 : 110.0) no description available & (reliability: 324.0) & (original description: Putative MIEL1, Description = RING finger and CHY zinc finger domain-containing protein 1, PFAM = PF05495;PF13445)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf07000_148905-159933' '(at3g08505 : 411.0) zinc finger (CCCH-type/C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36257 : 160.0) no description available & (reliability: 822.0) & (original description: Putative MKRN, Description = E3 ubiquitin-protein ligase makorin, PFAM = PF00097;PF00642;PF00642)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf07023_367758-382626' '(at3g56590 : 278.0) hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G10810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 510.0) & (original description: Putative BnaC08g27490D, Description = BnaC08g27490D protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf07044_339270-343997' '(at1g71020 : 605.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G23030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q64ha9|spl11_orysa : 425.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 94.5) no description available & (gnl|cdd|39425 : 84.7) no description available & (reliability: 1210.0) & (original description: Putative PUB10, Description = U-box domain-containing protein 10, PFAM = PF04564;PF00514;PF00514)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf07105_211676-214707' '(at1g04360 : 234.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G43420.1); Has 9268 Blast hits to 9239 proteins in 300 species: Archae - 0; Bacteria - 0; Metazoa - 2276; Fungi - 656; Plants - 4907; Viruses - 85; Other Eukaryotes - 1344 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative ATL1, Description = RING-H2 finger protein ATL1, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf07113_73986-79907' '(at1g24330 : 915.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G67530.2); Has 3064 Blast hits to 2955 proteins in 242 species: Archae - 0; Bacteria - 60; Metazoa - 394; Fungi - 149; Plants - 2167; Viruses - 3; Other Eukaryotes - 291 (source: NCBI BLink). & (q64ha9|spl11_orysa : 116.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 98.0) no description available & (reliability: 1830.0) & (original description: Putative PUB6, Description = U-box domain-containing protein 6, PFAM = PF04564;PF05804)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf07121_248173-256625' '(at3g54360 : 461.0) zinc ion binding; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); Has 748 Blast hits to 691 proteins in 131 species: Archae - 16; Bacteria - 104; Metazoa - 470; Fungi - 16; Plants - 58; Viruses - 8; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 922.0) & (original description: Putative BnaA07g16370D, Description = BnaA07g16370D protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf07162_173849-177324' '(at3g48070 : 179.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G62910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37279 : 132.0) no description available & (reliability: 358.0) & (original description: Putative RFP1, Description = C4C4-type RING finger protein, PFAM = PF14570)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf07327_103167-106485' '(at4g00335 : 137.0) RING-H2 finger B1A (RHB1A); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative RHB1A, Description = Probable E3 ubiquitin-protein ligase RHB1A, PFAM = PF12678)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf07417_180813-190032' '(at1g04790 : 184.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G55530.1); Has 9425 Blast hits to 9403 proteins in 278 species: Archae - 0; Bacteria - 0; Metazoa - 2591; Fungi - 765; Plants - 4746; Viruses - 72; Other Eukaryotes - 1251 (source: NCBI BLink). & (gnl|cdd|39828 : 81.2) no description available & (reliability: 368.0) & (original description: Putative BnaC08g27190D, Description = BnaC08g27190D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf07428_47664-50866' '(at3g07370 : 159.0) Encodes AtCHIP, a new class of E3 ubiquitin ligases with three tetratricopeptide repeats and a U-box domain, structurally similar to the animal CHIP proteins. Plays an important role in plant cellular metabolism under temperature stress conditions. Functions as an E3 ubiquitin ligase of protein phosphatase 2A subunits and alters plant response to abscisic acid treatment.; carboxyl terminus of HSC70-interacting protein (CHIP); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: response to salt stress, response to temperature stimulus, response to abscisic acid stimulus, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), U box domain (InterPro:IPR003613), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: protein phosphatase 5.2 (TAIR:AT2G42810.2); Has 6721 Blast hits to 5903 proteins in 442 species: Archae - 38; Bacteria - 482; Metazoa - 2236; Fungi - 1004; Plants - 1936; Viruses - 0; Other Eukaryotes - 1025 (source: NCBI BLink). & (gnl|cdd|39841 : 127.0) no description available & (reliability: 318.0) & (original description: Putative CHIP, Description = E3 ubiquitin-protein ligase CHIP, PFAM = PF00515;PF12895)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf07494_43161-53216' '(at2g22120 : 365.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G11020.1). & (reliability: 730.0) & (original description: Putative ZNF2, Description = E3 ubiquitin-protein ligase MARCH8, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf07508_1064048-1084113' '(at3g47550 : 210.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to salt stress; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G62460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36822 : 141.0) no description available & (reliability: 420.0) & (original description: Putative ZFP1, Description = E3 ubiquitin-protein ligase MARCH3, PFAM = PF12428;PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf07528_38570-69071' '(at4g03510 : 161.0) RMA1 encodes a novel 28 kDa protein with a RING finger motif and a C-terminal membrane-anchoring domain that is involved in the secretory pathway. Has E3 ubiquitin ligase activity.; RING membrane-anchor 1 (RMA1); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING membrane-anchor 2 (TAIR:AT4G28270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36041 : 144.0) no description available & (reliability: 322.0) & (original description: Putative RMA1H1, Description = E3 ubiquitin-protein ligase RMA1H1, PFAM = PF00097)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf07554_143383-151047' '(at2g45530 : 234.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G60580.4); Has 964 Blast hits to 960 proteins in 87 species: Archae - 0; Bacteria - 0; Metazoa - 324; Fungi - 6; Plants - 589; Viruses - 3; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative At2g45530, Description = At2g45530, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf07584_335601-342573' '(at3g47990 : 498.0) SUGAR-INSENSITIVE 3 (SIS3); FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: sugar mediated signaling pathway; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G66070.1); Has 9412 Blast hits to 9385 proteins in 270 species: Archae - 0; Bacteria - 0; Metazoa - 2601; Fungi - 698; Plants - 4895; Viruses - 18; Other Eukaryotes - 1200 (source: NCBI BLink). & (reliability: 996.0) & (original description: Putative SIS3, Description = E3 ubiquitin-protein ligase SIS3, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf07586_186337-196348' '(at5g01960 : 565.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G65040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39838 : 166.0) no description available & (reliability: 1130.0) & (original description: Putative RNF1, Description = RING finger protein, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf07608_128848-135013' '(at1g72220 : 142.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G33565.1); Has 9784 Blast hits to 9740 proteins in 308 species: Archae - 0; Bacteria - 7; Metazoa - 2351; Fungi - 909; Plants - 4998; Viruses - 86; Other Eukaryotes - 1433 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative ATL52, Description = RING-H2 finger protein ATL54, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf07614_273508-276422' '(at4g35070 : 165.0) SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: S-ribonuclease binding protein 1 (TAIR:AT1G45976.1); Has 698 Blast hits to 689 proteins in 99 species: Archae - 0; Bacteria - 9; Metazoa - 204; Fungi - 4; Plants - 376; Viruses - 12; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|36316 : 126.0) no description available & (reliability: 330.0) & (original description: Putative At4g35070, Description = At4g35070, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf07639_449062-452156' '(at3g60220 : 177.0) Encodes a putative RING-H2 zinc finger protein ATL4 (ATL4).; TOXICOS EN LEVADURA 4 (ATL4); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G72200.1); Has 8923 Blast hits to 8901 proteins in 292 species: Archae - 0; Bacteria - 8; Metazoa - 2301; Fungi - 667; Plants - 4759; Viruses - 54; Other Eukaryotes - 1134 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative ATL4, Description = E3 ubiquitin-protein ligase ATL4, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf07672_76359-80767' '(at5g05830 : 153.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G01070.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative At5g05830, Description = At5g05830, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf07741_575576-582357' '(at1g50440 : 348.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G11020.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36822 : 82.3) no description available & (reliability: 696.0) & (original description: Putative Os02g0132300, Description = Os02g0132300 protein, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf07742_242478-249031' '(at2g02960 : 224.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G14260.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36822 : 138.0) no description available & (reliability: 448.0) & (original description: Putative BnaA06g33920D, Description = BnaA06g33920D protein, PFAM = PF12906;PF12428)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf07880_154612-159931' '(at3g55530 : 139.0) Encodes an intracellular membrane localized protein with E3 ligase activity that is involved in regulation of ABA signaling. Loss of function alleles show decreased sensitivity to ABA. Overexpression results in increased sensitivity to ABA.; SALT- AND DROUGHT-INDUCED RING FINGER1 (SDIR1); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G04790.1); Has 9775 Blast hits to 9747 proteins in 287 species: Archae - 0; Bacteria - 6; Metazoa - 2690; Fungi - 760; Plants - 4971; Viruses - 89; Other Eukaryotes - 1259 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative PGSC0003DMG400002152, Description = , PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf07880_204649-207794' '(at3g46620 : 256.0) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Protein of unknown function DUF1117 (InterPro:IPR010543); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT5G59550.1); Has 8876 Blast hits to 8844 proteins in 271 species: Archae - 0; Bacteria - 6; Metazoa - 2388; Fungi - 760; Plants - 4652; Viruses - 43; Other Eukaryotes - 1027 (source: NCBI BLink). & (gnl|cdd|70034 : 91.6) no description available & (reliability: 512.0) & (original description: Putative BnaC04g05710D, Description = BnaC04g05710D protein, PFAM = PF13639;PF14369;PF06547)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf07883_435261-437983' '(at2g42360 : 126.0) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G42350.1); Has 8862 Blast hits to 8837 proteins in 292 species: Archae - 0; Bacteria - 0; Metazoa - 2202; Fungi - 673; Plants - 4781; Viruses - 60; Other Eukaryotes - 1146 (source: NCBI BLink). & (gnl|cdd|39828 : 80.0) no description available & (reliability: 252.0) & (original description: Putative ATL41, Description = E3 ubiquitin-protein ligase ATL41, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf08001_149517-157127' '(at2g14835 : 407.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39173 : 109.0) no description available & (reliability: 814.0) & (original description: Putative ZnFC3CH4, Description = Zinc finger family protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf08026_239453-245433' '(at2g35330 : 545.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G32530.1). & (reliability: 1090.0) & (original description: Putative MIP1, Description = MND1-interacting protein 1, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf08072_333351-347901' '(at2g38920 : 381.0) SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX (SYG1/Pho81/XPR1) domain-containing protein (TAIR:AT1G02860.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66759 : 80.8) no description available & (reliability: 762.0) & (original description: Putative BAH1, Description = Putative E3 ubiquitin-protein ligase BAH1-like 1, PFAM = PF13445)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf08199_329424-331962' '(at2g45530 : 120.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G60580.4); Has 964 Blast hits to 960 proteins in 87 species: Archae - 0; Bacteria - 0; Metazoa - 324; Fungi - 6; Plants - 589; Viruses - 3; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative Os10g0481450, Description = Os10g0481450 protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf08285_20967-24277' '(at5g08139 : 169.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G60820.1); Has 9271 Blast hits to 9218 proteins in 288 species: Archae - 4; Bacteria - 19; Metazoa - 2506; Fungi - 730; Plants - 4517; Viruses - 59; Other Eukaryotes - 1436 (source: NCBI BLink). & (gnl|cdd|39828 : 80.4) no description available & (reliability: 338.0) & (original description: Putative RING1, Description = Zinc finger, RING/FYVE/PHD-type, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf08318_79339-85836' '(at4g01270 : 211.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01245.1); Has 5689 Blast hits to 5015 proteins in 477 species: Archae - 145; Bacteria - 387; Metazoa - 2946; Fungi - 366; Plants - 512; Viruses - 10; Other Eukaryotes - 1323 (source: NCBI BLink). & (gnl|cdd|36045 : 109.0) no description available & (reliability: 422.0) & (original description: Putative hip1, Description = A_IG002N01.19 protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf08374_547234-558949' '(at5g44280 : 200.0) Encodes a nuclear localized protein with similarity to animal polycomb repressive core complex1 (PRC1) core component RING.Appears to function redundantly with ATRING1b, a close paralog. Both interact physically with CLF and LHP1 and appear to function together to repress class I KNOX gene expression.; RING 1A (RING1A); FUNCTIONS IN: zinc ion binding; INVOLVED IN: negative regulation of gene expression, epigenetic; LOCATED IN: nucleus, PRC1 complex; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: RING 1B (TAIR:AT1G03770.1); Has 9014 Blast hits to 7495 proteins in 568 species: Archae - 41; Bacteria - 677; Metazoa - 3346; Fungi - 1171; Plants - 610; Viruses - 87; Other Eukaryotes - 3082 (source: NCBI BLink). & (gnl|cdd|35532 : 158.0) no description available & (reliability: 400.0) & (original description: Putative RING1B, Description = Putative E3 ubiquitin-protein ligase RING1b, PFAM = PF13923)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf08374_786027-798822' '(at4g28370 : 864.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G20650.2); Has 309 Blast hits to 308 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 74; Fungi - 25; Plants - 165; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|36046 : 576.0) no description available & (reliability: 1728.0) & (original description: Putative At4g28370, Description = At4g28370, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf08388_66118-71790' '(at2g01275 : 225.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G38070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36822 : 97.0) no description available & (reliability: 450.0) & (original description: Putative Os01g0121200, Description = Os01g0121200 protein, PFAM = PF12906;PF12428)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf08446_41910-44608' '(gnl|cdd|36041 : 155.0) no description available & (at4g27470 : 149.0) Encodes a RING finger E3 ubiquitin ligase.; RING membrane-anchor 3 (RMA3); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING membrane-anchor 1 (TAIR:AT4G03510.2); Has 2828 Blast hits to 2826 proteins in 265 species: Archae - 0; Bacteria - 0; Metazoa - 1348; Fungi - 459; Plants - 695; Viruses - 22; Other Eukaryotes - 304 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative RMA1H1, Description = E3 ubiquitin-protein ligase RMA1H1, PFAM = PF00097)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf08447_888695-892671' '(at3g07360 : 516.0) The protein that is predicted to be encoded by this gene model lacks the U-box domain identified in the AT3G07360.1 gene model.; plant U-box 9 (PUB9); CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G18320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q64ha9|spl11_orysa : 250.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 94.9) no description available & (reliability: 1032.0) & (original description: Putative PUB9, Description = U-box domain-containing protein 9, PFAM = PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf08447_962448-993600' '(at3g07370 : 376.0) Encodes AtCHIP, a new class of E3 ubiquitin ligases with three tetratricopeptide repeats and a U-box domain, structurally similar to the animal CHIP proteins. Plays an important role in plant cellular metabolism under temperature stress conditions. Functions as an E3 ubiquitin ligase of protein phosphatase 2A subunits and alters plant response to abscisic acid treatment.; carboxyl terminus of HSC70-interacting protein (CHIP); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: response to salt stress, response to temperature stimulus, response to abscisic acid stimulus, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), U box domain (InterPro:IPR003613), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: protein phosphatase 5.2 (TAIR:AT2G42810.2); Has 6721 Blast hits to 5903 proteins in 442 species: Archae - 38; Bacteria - 482; Metazoa - 2236; Fungi - 1004; Plants - 1936; Viruses - 0; Other Eukaryotes - 1025 (source: NCBI BLink). & (gnl|cdd|39841 : 274.0) no description available & (gnl|cdd|86687 : 108.0) no description available & (reliability: 752.0) & (original description: Putative Sb07g001340, Description = Putative uncharacterized protein Sb07g001340, PFAM = PF12895;PF04564;PF13181)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf08531_322188-328789' '(at1g72175 : 233.0) FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1232 (InterPro:IPR010652), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box protein with domain of unknown function (DUF 1232) (TAIR:AT1G22510.1); Has 671 Blast hits to 671 proteins in 108 species: Archae - 0; Bacteria - 8; Metazoa - 504; Fungi - 36; Plants - 67; Viruses - 2; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|37375 : 97.4) no description available & (reliability: 466.0) & (original description: Putative mTRF24, Description = mTERF transcription factor, PFAM = PF13920;PF06803)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf08578_35670-39881' '(at5g40720 : 592.0) CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G27330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85620 : 127.0) no description available & (reliability: 1156.0) & (original description: Putative RCOM_0530710, Description = Glycosyltransferase family 92 protein RCOM_0530710, PFAM = PF01697)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf08678_159067-163566' '(at3g07360 : 406.0) The protein that is predicted to be encoded by this gene model lacks the U-box domain identified in the AT3G07360.1 gene model.; plant U-box 9 (PUB9); CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G18320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q64ha9|spl11_orysa : 212.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 95.7) no description available & (reliability: 812.0) & (original description: Putative PUB2, Description = U-box domain-containing protein 9, PFAM = PF00514;PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf08680_249319-252122' '(at3g29270 : 340.0) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G69330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 680.0) & (original description: Putative Sb01g043230, Description = Putative uncharacterized protein Sb01g043230, PFAM = PF13445)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf08724_250194-253962' '(at2g35000 : 100.0) E3 ligase-like protein induced by chitin oligomers.; RING/U-box superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: defense response to fungus, response to chitin; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell, hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G35330.1); Has 9249 Blast hits to 9225 proteins in 281 species: Archae - 0; Bacteria - 6; Metazoa - 2393; Fungi - 760; Plants - 4794; Viruses - 39; Other Eukaryotes - 1257 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative Sb04g031240, Description = Putative uncharacterized protein Sb04g031240, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf08812_800-4933' '(at5g41350 : 134.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger B1A (TAIR:AT4G00335.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative RZFP4, Description = C3HC4 type zinc finger protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf08818_86937-89749' '(at3g14250 : 213.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: egg cell; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G53690.1); Has 3093 Blast hits to 3074 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 1283; Fungi - 653; Plants - 677; Viruses - 1; Other Eukaryotes - 479 (source: NCBI BLink). & (gnl|cdd|37023 : 144.0) no description available & (reliability: 426.0) & (original description: Putative IBR2, Description = Putative in between ring finger domain protein, PFAM = PF00097;PF01485;PF01485)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf08844_214964-224310' '(at3g63530 : 201.0) Encodes a novel E3 ubiquitin ligase that acts as a central negative regulator of Arabidopsis floral organ size. Organ size is limited by restricting the period of proliferative growth, rather than the rate of growth and appears to act in a novel pathway, independent of ANT and JAG. Both mRNA and protein are expressed in all actively growing regions of the plant and the vasculature and the protein is rapidly turned over by proteasome-mediated degradation.; BIG BROTHER (BB); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G19910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative BB, Description = E3 ubiquitin ligase BIG BROTHER, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf08876_47396-63306' '(at3g47180 : 115.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G19910.1); Has 6899 Blast hits to 6791 proteins in 270 species: Archae - 0; Bacteria - 34; Metazoa - 1877; Fungi - 301; Plants - 3664; Viruses - 39; Other Eukaryotes - 984 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative Sb07g024936, Description = Putative uncharacterized protein Sb07g024936, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf08947_243105-258349' '(at1g65430 : 815.0) ARIADNE 8 (ARI8); FUNCTIONS IN: ubiquitin-protein ligase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: IBR domain-containing protein (TAIR:AT2G31510.1); Has 2973 Blast hits to 2950 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 1311; Fungi - 559; Plants - 644; Viruses - 3; Other Eukaryotes - 456 (source: NCBI BLink). & (gnl|cdd|37026 : 414.0) no description available & (reliability: 1630.0) & (original description: Putative ARI8, Description = Probable E3 ubiquitin-protein ligase ARI8, PFAM = PF01485;PF01485)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf09082_119970-122987' '(at5g05830 : 84.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G01070.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative PGSC0003DMG400020435, Description = E3 ubiquitin-protein ligase MARCH3, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf09107_19082-21058' '(at3g29270 : 233.0) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G69330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative PGSC0003DMG400028383, Description = RING zinc finger protein, putative, expressed, PFAM = PF13445)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf09132_20668-32783' '(at2g16090 : 752.0) ARIADNE 2 (ARI2); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34370.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37026 : 333.0) no description available & (reliability: 1504.0) & (original description: Putative ARI2, Description = Probable E3 ubiquitin-protein ligase ARI2, PFAM = PF01485;PF01485)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf09150_224477-233392' '(at5g18650 : 397.0) CHY-type/CTCHY-type/RING-type Zinc finger protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G62970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37151 : 227.0) no description available & (reliability: 794.0) & (original description: Putative RCHY, Description = RING finger and CHY zinc finger domain-containing protein 1, PFAM = PF05495;PF14599;PF00097)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf09225_102304-111412' '(at1g35330 : 80.1) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G09120.1); Has 10408 Blast hits to 10377 proteins in 292 species: Archae - 0; Bacteria - 6; Metazoa - 2682; Fungi - 924; Plants - 5266; Viruses - 48; Other Eukaryotes - 1482 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative L484_016785, Description = RING-H2 finger protein ATL32, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf09232_130288-134354' '(at5g01830 : 624.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 17 (TAIR:AT1G29340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 209.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 99.5) no description available & (reliability: 1248.0) & (original description: Putative PUB16, Description = U-box domain-containing protein 16, PFAM = PF00514;PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf09365_150624-169141' '(at1g74770 : 1066.0) zinc ion binding; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Haemerythrin/HHE cation-binding motif (InterPro:IPR012312); BEST Arabidopsis thaliana protein match is: zinc ion binding;zinc ion binding (TAIR:AT1G18910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37151 : 286.0) no description available & (gnl|cdd|69040 : 81.9) no description available & (reliability: 2064.0) & (original description: Putative At1g74770, Description = Zinc ion binding protein, PFAM = PF01814;PF01814;PF13639;PF05495;PF14599)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf09368_211988-215034' '(at4g33565 : 127.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G72220.1); Has 9700 Blast hits to 9677 proteins in 303 species: Archae - 0; Bacteria - 6; Metazoa - 2357; Fungi - 776; Plants - 5096; Viruses - 103; Other Eukaryotes - 1362 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative ATL53, Description = RING-H2 finger protein ATL54, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf09512_336323-347668' '(at4g01270 : 281.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01245.1); Has 5689 Blast hits to 5015 proteins in 477 species: Archae - 145; Bacteria - 387; Metazoa - 2946; Fungi - 366; Plants - 512; Viruses - 10; Other Eukaryotes - 1323 (source: NCBI BLink). & (gnl|cdd|36045 : 165.0) no description available & (reliability: 562.0) & (original description: Putative hip1, Description = Potyviral helper component protease-interacting protein 1, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf09599_62136-68115' '(at1g10650 : 315.0) SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: SBP (S-ribonuclease binding protein) family protein (TAIR:AT1G60610.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36316 : 160.0) no description available & (reliability: 630.0) & (original description: Putative At1g10650, Description = Putative S-ribonuclease binding protein SBP1, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf09701_74179-114862' '(at2g22120 : 485.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G11020.1). & (gnl|cdd|36822 : 80.8) no description available & (reliability: 970.0) & (original description: Putative ZNF2, Description = RING/FYVE/PHD zinc finger superfamily protein, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf09745_60101-67702' '(at5g63970 : 476.0) Copine (Calcium-dependent phospholipid-binding protein) family; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Copine (InterPro:IPR010734), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: RING domain ligase1 (TAIR:AT3G01650.1); Has 1765 Blast hits to 1760 proteins in 138 species: Archae - 0; Bacteria - 0; Metazoa - 1037; Fungi - 2; Plants - 411; Viruses - 37; Other Eukaryotes - 278 (source: NCBI BLink). & (gnl|cdd|36541 : 303.0) no description available & (gnl|cdd|29232 : 277.0) no description available & (reliability: 952.0) & (original description: Putative RGLG1, Description = E3 ubiquitin-protein ligase RGLG1, PFAM = PF07002)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf09791_20738-23397' '(at2g23780 : 213.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G19310.1); Has 3846 Blast hits to 3838 proteins in 274 species: Archae - 0; Bacteria - 0; Metazoa - 2175; Fungi - 493; Plants - 714; Viruses - 21; Other Eukaryotes - 443 (source: NCBI BLink). & (gnl|cdd|36041 : 160.0) no description available & (reliability: 426.0) & (original description: Putative DTR1, Description = RING type E3 ligase, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf09954_62436-65826' '(at2g44580 : 439.0) zinc ion binding; CONTAINS InterPro DOMAIN/s: Sister chromatid cohesion protein DCC1 (InterPro:IPR019128); Has 214 Blast hits to 211 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 115; Fungi - 49; Plants - 36; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|36017 : 288.0) no description available & (reliability: 878.0) & (original description: Putative At2g44580, Description = Zinc ion binding protein, PFAM = PF09724)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf10055_953399-966808' '(at5g45290 : 239.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT4G11680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 478.0) & (original description: Putative glysoja_003497, Description = E3 ubiquitin-protein ligase ATL9, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf10158_133294-137626' '(at1g32740 : 167.0) SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: SBP (S-ribonuclease binding protein) family protein (TAIR:AT4G17680.1); Has 798 Blast hits to 798 proteins in 121 species: Archae - 0; Bacteria - 4; Metazoa - 316; Fungi - 15; Plants - 388; Viruses - 21; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|36316 : 145.0) no description available & (reliability: 334.0) & (original description: Putative BnaC07g19870D, Description = BnaC07g19870D protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf10228_209776-212974' '(at5g02750 : 160.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G19950.1); Has 8586 Blast hits to 8564 proteins in 268 species: Archae - 0; Bacteria - 6; Metazoa - 2607; Fungi - 605; Plants - 4117; Viruses - 22; Other Eukaryotes - 1229 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative SGR9, Description = E3 ubiquitin-protein ligase SGR9, amyloplastic, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf10278_271835-421136' '(at1g72200 : 160.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G22500.1); Has 9343 Blast hits to 9316 proteins in 282 species: Archae - 0; Bacteria - 4; Metazoa - 2295; Fungi - 806; Plants - 4899; Viruses - 51; Other Eukaryotes - 1288 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative ATL6, Description = E3 ubiquitin-protein ligase ATL6, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf10278_276055-421190' '(at3g05200 : 159.0) Encodes a putative RING-H2 zinc finger protein ATL6 (ATL6).; ATL6; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: carbon/nitrogen insensitive 1 (TAIR:AT5G27420.1); Has 9947 Blast hits to 9919 proteins in 286 species: Archae - 0; Bacteria - 0; Metazoa - 2610; Fungi - 790; Plants - 5036; Viruses - 50; Other Eukaryotes - 1461 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative ATL35, Description = RING-H2 finger protein ATL1N, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf10412_77610-85351' '(at4g34370 : 585.0) ARIADNE 1 (ARI1); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G16090.1). & (gnl|cdd|37026 : 297.0) no description available & (reliability: 1170.0) & (original description: Putative ARI1, Description = IBR domain containing protein, expressed, PFAM = PF01485;PF01485)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf10436_331794-334573' '(at1g53820 : 123.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G72310.1); Has 9301 Blast hits to 9282 proteins in 297 species: Archae - 0; Bacteria - 0; Metazoa - 2391; Fungi - 736; Plants - 4843; Viruses - 80; Other Eukaryotes - 1251 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative ACRE132, Description = Avr9/Cf-9 rapidly elicited protein 132, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf10476_115521-125023' '(at5g45290 : 127.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT4G11680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative glysoja_022438, Description = RING-H2 finger protein ATL65, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf10636_48212-51678' '(at5g27420 : 187.0) Encodes CNI1 (Carbon/Nitrogen Insensitive1) (also named as ATL31), a RING type ubiquitin ligase that functions in the Carbon/Nitrogen response for growth phase transition in Arabidopsis seedlings.; carbon/nitrogen insensitive 1 (CNI1); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G05200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative ATL6, Description = E3 ubiquitin-protein ligase ATL6, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf11124_145073-149226' '(at5g48655 : 119.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G07200.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative BnaA01g32420D, Description = BnaA01g32420D protein, PFAM = PF13923)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf11261_67153-70614' '(at3g05200 : 200.0) Encodes a putative RING-H2 zinc finger protein ATL6 (ATL6).; ATL6; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: carbon/nitrogen insensitive 1 (TAIR:AT5G27420.1); Has 9947 Blast hits to 9919 proteins in 286 species: Archae - 0; Bacteria - 0; Metazoa - 2610; Fungi - 790; Plants - 5036; Viruses - 50; Other Eukaryotes - 1461 (source: NCBI BLink). & (gnl|cdd|39828 : 80.4) no description available & (reliability: 400.0) & (original description: Putative ATL6, Description = RING-H2 finger protein ATL3B, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf11261_220591-227976' '(at3g06140 : 298.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G19080.1); Has 7743 Blast hits to 5478 proteins in 376 species: Archae - 2; Bacteria - 144; Metazoa - 2405; Fungi - 531; Plants - 3352; Viruses - 272; Other Eukaryotes - 1037 (source: NCBI BLink). & (gnl|cdd|39466 : 253.0) no description available & (reliability: 596.0) & (original description: Putative LOG2, Description = E3 ubiquitin-protein ligase MGRN1, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf11261_220633-278852' '(at3g06140 : 299.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G19080.1); Has 7743 Blast hits to 5478 proteins in 376 species: Archae - 2; Bacteria - 144; Metazoa - 2405; Fungi - 531; Plants - 3352; Viruses - 272; Other Eukaryotes - 1037 (source: NCBI BLink). & (gnl|cdd|39466 : 255.0) no description available & (reliability: 598.0) & (original description: Putative LOG2, Description = Probable E3 ubiquitin-protein ligase LOG2, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf11560_11710-15226' '(at2g17730 : 314.0) Intrinsic thylakoid membrane protein that fixes RPOTmp on the stromal side of the thylakoid membrane.; NEP-interacting protein 2 (NIP2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G35840.1). & (reliability: 628.0) & (original description: Putative nip, Description = NEP1-interacting protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf11621_143430-149918' '(at4g39140 : 250.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G21500.1); Has 1557 Blast hits to 280 proteins in 56 species: Archae - 0; Bacteria - 6; Metazoa - 62; Fungi - 44; Plants - 176; Viruses - 0; Other Eukaryotes - 1269 (source: NCBI BLink). & (reliability: 500.0) & (original description: Putative BnaA01g05370D, Description = BnaA01g05370D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf11723_50877-61007' '(at1g63900 : 500.0) E3 Ubiquitin ligase family protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), E3 Ubiquitin ligase (InterPro:IPR022170); BEST Arabidopsis thaliana protein match is: E3 Ubiquitin ligase family protein (TAIR:AT1G59560.1). & (gnl|cdd|36784 : 244.0) no description available & (reliability: 1000.0) & (original description: Putative SP1, Description = E3 ubiquitin-protein ligase SP1, PFAM = PF13920;PF12483)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf11756_126119-139339' '(at3g45630 : 689.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|37279 : 262.0) no description available & (gnl|cdd|34774 : 215.0) no description available & (reliability: 1378.0) & (original description: Putative CNOT4, Description = CNOT4, PFAM = PF14570;PF00076)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf11837_10199-17446' '(at2g15530 : 228.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34040.1). & (reliability: 456.0) & (original description: Putative ZFP1, Description = C3HC4-type RING finger protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf11952_96838-104159' '(at3g05670 : 132.0) RING/U-box protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein (TAIR:AT1G67180.1); Has 32410 Blast hits to 21304 proteins in 1066 species: Archae - 126; Bacteria - 4266; Metazoa - 11275; Fungi - 4969; Plants - 2419; Viruses - 550; Other Eukaryotes - 8805 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative PGSC0003DMG400004060, Description = PHD and RING finger domain-containing protein 1, PFAM = PF00628)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf12037_120482-125440' '(at5g10650 : 254.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G24870.2); Has 11297 Blast hits to 9396 proteins in 312 species: Archae - 0; Bacteria - 114; Metazoa - 2874; Fungi - 769; Plants - 4627; Viruses - 60; Other Eukaryotes - 2853 (source: NCBI BLink). & (reliability: 508.0) & (original description: Putative At5g10650, Description = At5g10650, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf12092_101310-107564' '(at3g54790 : 579.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein with ARM repeat domain (TAIR:AT2G23140.2); Has 7003 Blast hits to 4423 proteins in 282 species: Archae - 0; Bacteria - 30; Metazoa - 1363; Fungi - 548; Plants - 4306; Viruses - 3; Other Eukaryotes - 753 (source: NCBI BLink). & (q64ha9|spl11_orysa : 186.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|39425 : 100.0) no description available & (gnl|cdd|47808 : 96.5) no description available & (reliability: 1158.0) & (original description: Putative PUB3, Description = U-box domain-containing protein 3, PFAM = PF00514;PF00514;PF00514;PF00514;PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf12159_993692-1014538' '(at2g30580 : 423.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 2 (DRIP2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 1 (TAIR:AT1G06770.1); Has 1631 Blast hits to 1626 proteins in 163 species: Archae - 0; Bacteria - 2; Metazoa - 1227; Fungi - 58; Plants - 232; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|37871 : 137.0) no description available & (reliability: 846.0) & (original description: Putative DRIP2, Description = E3 ubiquitin protein ligase DRIP2, PFAM = PF13923)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf12160_24549-40316' '(at1g47570 : 546.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); Has 1139 Blast hits to 1128 proteins in 149 species: Archae - 0; Bacteria - 0; Metazoa - 795; Fungi - 82; Plants - 91; Viruses - 39; Other Eukaryotes - 132 (source: NCBI BLink). & (reliability: 1092.0) & (original description: Putative BnaA05g07670D, Description = BnaA05g07670D protein, PFAM = PF00097)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf12422_137396-141509' '(at5g65200 : 479.0) Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays.; plant U-box 38 (PUB38); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein with ARM repeat domain (TAIR:AT5G62560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 112.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 958.0) & (original description: Putative PUB38, Description = U-box domain-containing protein 38, PFAM = PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf12469_42608-48287' '(at4g19670 : 565.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT5G60250.1); Has 3330 Blast hits to 3305 proteins in 225 species: Archae - 1; Bacteria - 6; Metazoa - 1257; Fungi - 660; Plants - 920; Viruses - 0; Other Eukaryotes - 486 (source: NCBI BLink). & (gnl|cdd|37023 : 198.0) no description available & (reliability: 1130.0) & (original description: Putative RTRP3, Description = Reverse transcriptase-like domain-containing RBR protein, PFAM = PF13456;PF00097;PF01485;PF01485)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf12672_41519-45251' '(at2g15580 : 114.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 228.0) & (original description: Putative BnaA07g04160D, Description = BnaA07g04160D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf12830_85977-99516' '(at1g67180 : 326.0) zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: transcription coactivators (TAIR:AT4G02110.1); Has 2482 Blast hits to 2442 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 1048; Fungi - 450; Plants - 465; Viruses - 61; Other Eukaryotes - 458 (source: NCBI BLink). & (gnl|cdd|36043 : 109.0) no description available & (reliability: 652.0) & (original description: Putative BnaA02g12920D, Description = BnaA02g12920D protein, PFAM = PF12738;PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf12987_54536-56997' '(at5g07040 : 114.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G53110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative ATL69, Description = Putative RING-H2 finger protein ATL69, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf13522_144835-161822' '(at3g46510 : 820.0) Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. Can be phosphorylated in vitro by MLPK, ARK1, and ARK2 but not by SD1-29.; plant U-box 13 (PUB13); CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: PLANT U-BOX 12 (TAIR:AT2G28830.1); Has 8308 Blast hits to 5676 proteins in 314 species: Archae - 6; Bacteria - 52; Metazoa - 2498; Fungi - 809; Plants - 4013; Viruses - 3; Other Eukaryotes - 927 (source: NCBI BLink). & (q64ha9|spl11_orysa : 632.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 104.0) no description available & (gnl|cdd|39425 : 91.7) no description available & (reliability: 1640.0) & (original description: Putative PUB13, Description = U-box domain-containing protein 13, PFAM = PF00514;PF00514;PF04564;PF05536)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf13621_128640-132084' '(at2g46495 : 147.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G25410.1); Has 16199 Blast hits to 8554 proteins in 281 species: Archae - 0; Bacteria - 0; Metazoa - 3863; Fungi - 941; Plants - 9494; Viruses - 61; Other Eukaryotes - 1840 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative , Description = RING-H2 finger protein ATL3K, putative, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf13621_254186-258124' '(at5g53110 : 118.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G46495.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative ATL20, Description = Putative RING-H2 finger protein ATL21A, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf13776_50939-56922' '(at1g71020 : 632.0) ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G23030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q64ha9|spl11_orysa : 421.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 95.7) no description available & (gnl|cdd|39425 : 88.2) no description available & (reliability: 1264.0) & (original description: Putative LOC100193248, Description = Putative ARM repeat-containing protein containing family protein, PFAM = PF04564;PF00514;PF00514)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf13831_50869-61309' '(at3g46510 : 832.0) Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. Can be phosphorylated in vitro by MLPK, ARK1, and ARK2 but not by SD1-29.; plant U-box 13 (PUB13); CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: PLANT U-BOX 12 (TAIR:AT2G28830.1); Has 8308 Blast hits to 5676 proteins in 314 species: Archae - 6; Bacteria - 52; Metazoa - 2498; Fungi - 809; Plants - 4013; Viruses - 3; Other Eukaryotes - 927 (source: NCBI BLink). & (q64ha9|spl11_orysa : 675.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|47808 : 104.0) no description available & (gnl|cdd|39425 : 98.2) no description available & (reliability: 1664.0) & (original description: Putative PUB13, Description = U-box domain-containing protein 13, PFAM = PF00514;PF00514;PF00514;PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf14101_214824-219206' '(at3g14250 : 196.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: egg cell; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G53690.1); Has 3093 Blast hits to 3074 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 1283; Fungi - 653; Plants - 677; Viruses - 1; Other Eukaryotes - 479 (source: NCBI BLink). & (gnl|cdd|37023 : 164.0) no description available & (reliability: 392.0) & (original description: Putative Ccrd_021468, Description = Zinc finger, C3HC4 RING-type, PFAM = PF01485;PF01485)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf14164_122017-124780' '(at2g46494 : 116.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G46495.1). & (reliability: 232.0) & (original description: Putative ATL69, Description = RING-H2 finger protein ATL1E, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf14390_12530-19135' '(at5g38895 : 226.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G15790.2). & (reliability: 452.0) & (original description: Putative At3g02290, Description = E3 ubiquitin-protein ligase At3g02290, PFAM = PF12678)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf14778_35122-38045' '(at3g05200 : 199.0) Encodes a putative RING-H2 zinc finger protein ATL6 (ATL6).; ATL6; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: carbon/nitrogen insensitive 1 (TAIR:AT5G27420.1); Has 9947 Blast hits to 9919 proteins in 286 species: Archae - 0; Bacteria - 0; Metazoa - 2610; Fungi - 790; Plants - 5036; Viruses - 50; Other Eukaryotes - 1461 (source: NCBI BLink). & (gnl|cdd|39828 : 82.4) no description available & (reliability: 398.0) & (original description: Putative ATL6, Description = E3 ubiquitin-protein ligase ATL6, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf14922_129346-137187' '(at1g20780 : 221.0) Encodes a protein containing a U-box and an ARM domain.; senescence-associated E3 ubiquitin ligase 1 (SAUL1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of chlorophyll catabolic process, regulation of chlorophyll biosynthetic process, leaf senescence, regulation of abscisic acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G76390.2); Has 2790 Blast hits to 2660 proteins in 201 species: Archae - 0; Bacteria - 20; Metazoa - 434; Fungi - 161; Plants - 1969; Viruses - 3; Other Eukaryotes - 203 (source: NCBI BLink). & (gnl|cdd|47808 : 86.4) no description available & (q64ha9|spl11_orysa : 84.7) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 428.0) & (original description: Putative glysoja_015640, Description = U-box domain-containing protein 43, PFAM = PF05659;PF04826;PF04564)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf15067_35259-43020' '(at3g61180 : 340.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT4G11680.1); Has 9287 Blast hits to 9262 proteins in 268 species: Archae - 0; Bacteria - 6; Metazoa - 2550; Fungi - 691; Plants - 4858; Viruses - 35; Other Eukaryotes - 1147 (source: NCBI BLink). & (reliability: 680.0) & (original description: Putative At4g11680, Description = E3 ubiquitin-protein ligase At4g11680, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf15166_245262-249921' '(at5g55970 : 376.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G26580.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 752.0) & (original description: Putative BnaA10g10110D, Description = BnaA10g10110D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf15391_245130-248167' '(at5g17600 : 187.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G03550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative ATL51, Description = RING-H2 finger protein ATL51, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf15435_64831-76624' '(at3g53690 : 160.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G14250.1); Has 3158 Blast hits to 3141 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 1307; Fungi - 709; Plants - 671; Viruses - 0; Other Eukaryotes - 471 (source: NCBI BLink). & (gnl|cdd|37023 : 121.0) no description available & (reliability: 320.0) & (original description: Putative RCOM_1205110, Description = Zinc finger protein, putative, PFAM = PF00097;PF16987;PF16987;PF01485)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf16092_93519-98413' '(at1g60360 : 203.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G19950.1); Has 9982 Blast hits to 9957 proteins in 273 species: Archae - 0; Bacteria - 6; Metazoa - 2754; Fungi - 1005; Plants - 4741; Viruses - 16; Other Eukaryotes - 1460 (source: NCBI BLink). & (reliability: 406.0) & (original description: Putative BnaA04g08560D, Description = BnaA04g08560D protein, PFAM = PF13639;PF14369)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf16127_18061-33081' '(at2g39100 : 223.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); Has 1875 Blast hits to 1873 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 654; Fungi - 156; Plants - 687; Viruses - 149; Other Eukaryotes - 229 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative BnaC04g46090D, Description = BnaC04g46090D protein, PFAM = PF13639;PF01480)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf17612_94901-101948' '(at1g03370 : 1372.0) C2 calcium/lipid-binding and GRAM domain containing protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), GRAM (InterPro:IPR004182), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding and GRAM domain containing protein (TAIR:AT5G50170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36250 : 394.0) no description available & (gnl|cdd|28912 : 100.0) no description available & (reliability: 2744.0) & (original description: Putative At1g03370, Description = C2 and GRAM domain-containing protein At1g03370, PFAM = PF00168;PF00168;PF02893;PF16016;PF16016)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf18057_6257-17103' '(at2g20650 : 866.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G28370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36046 : 592.0) no description available & (reliability: 1732.0) & (original description: Putative At2g20650, Description = At2g20650, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf18080_321029-325794' '(at5g01960 : 214.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G65040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39838 : 112.0) no description available & (reliability: 428.0) & (original description: Putative RNF1, Description = RING finger and transmembrane domain-containing protein 2, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf18099_8776-15559' '(at5g60580 : 414.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G09760.1); Has 1580 Blast hits to 1234 proteins in 158 species: Archae - 0; Bacteria - 10; Metazoa - 420; Fungi - 112; Plants - 626; Viruses - 18; Other Eukaryotes - 394 (source: NCBI BLink). & (gnl|cdd|36822 : 122.0) no description available & (reliability: 828.0) & (original description: Putative BnaA02g06200D, Description = BnaA02g06200D protein, PFAM = PF12906)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf19307_3310-7031' '(at2g15580 : 110.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 220.0) & (original description: Putative BnaA07g04160D, Description = BnaA07g04160D protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf20636_86225-88827' '(at1g76410 : 121.0) ATL8; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G20823.1); Has 9001 Blast hits to 8977 proteins in 267 species: Archae - 0; Bacteria - 0; Metazoa - 2299; Fungi - 634; Plants - 4930; Viruses - 29; Other Eukaryotes - 1109 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative ATL44, Description = Probable E3 ubiquitin-protein ligase ATL44, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf21584_6575-12864' '(at4g39140 : 236.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G21500.1); Has 1557 Blast hits to 280 proteins in 56 species: Archae - 0; Bacteria - 6; Metazoa - 62; Fungi - 44; Plants - 176; Viruses - 0; Other Eukaryotes - 1269 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative PGSC0003DMG400025731, Description = RING/U-box domain-containing protein, PFAM = PF13639)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf21890_78185-85432' '(at2g30580 : 166.0) Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.; DREB2A-interacting protein 2 (DRIP2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 1 (TAIR:AT1G06770.1); Has 1631 Blast hits to 1626 proteins in 163 species: Archae - 0; Bacteria - 2; Metazoa - 1227; Fungi - 58; Plants - 232; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative PGSC0003DMG400004205, Description = BnaC04g13880D protein, PFAM = )' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf25562_152738-155831' '(at3g12920 : 235.0) SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G79110.2); Has 1634 Blast hits to 1631 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 874; Fungi - 0; Plants - 566; Viruses - 36; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|36316 : 176.0) no description available & (reliability: 470.0) & (original description: Putative BRG3, Description = Probable BOI-related E3 ubiquitin-protein ligase 3, PFAM = PF13920)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf25893_21509-27017' '(at3g05250 : 247.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); Has 547 Blast hits to 545 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 229; Fungi - 32; Plants - 178; Viruses - 65; Other Eukaryotes - 43 (source: NCBI BLink). & (reliability: 494.0) & (original description: Putative At3g05250, Description = At3g05250, PFAM = PF00097)' T '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'niben101scf29144_28562-31098' '(at3g10910 : 134.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G05280.1); Has 8963 Blast hits to 8935 proteins in 281 species: Archae - 0; Bacteria - 6; Metazoa - 2174; Fungi - 625; Plants - 4988; Viruses - 47; Other Eukaryotes - 1123 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative ATL72, Description = RING-H2 finger protein ATL72, PFAM = PF13639)' T '29.5.11.4.3' 'protein.degradation.ubiquitin.E3.SCF' '' '' '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'nbv0.3scaffold16195_3171-8566' '(at1g75950 : 210.0) SKP1 is core component of the SCF family of E3 ubiquitin ligases and serves to tether the rest of the complex to an F-box protein, which provides specificity in binding to ubiquitin ligase substrate proteins. Predominately expressed from leptotene to pachytene. Negatively regulates recombination. Interacts with P0, a silencing suppressor protein encoded by poleroviruses by means of a conserved minimal F-box motif.; S phase kinase-associated protein 1 (SKP1); FUNCTIONS IN: ubiquitin-protein ligase activity, protein binding; INVOLVED IN: negative regulation of DNA recombination, response to cadmium ion, mitosis, male meiosis, ubiquitin-dependent protein catabolic process; LOCATED IN: in 7 components; EXPRESSED IN: 35 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein (TAIR:AT5G42190.1); Has 1455 Blast hits to 1451 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 552; Fungi - 179; Plants - 538; Viruses - 11; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|36935 : 197.0) no description available & (gnl|cdd|34800 : 141.0) no description available & (reliability: 420.0) & (original description: Putative ASK9, Description = SKP1-like protein 9, PFAM = PF01466;PF03931)' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'nbv0.3scaffold43957_74-7176' '(at3g61415 : 304.0) SKP1-like 21 (SK21); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: SCF ubiquitin ligase complex; EXPRESSED IN: stem, fruit, root, inflorescence, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 20 (TAIR:AT2G45950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36935 : 105.0) no description available & (reliability: 608.0) & (original description: Putative ASK21, Description = SKP1-like protein 21, PFAM = PF03931;PF01466)' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'nbv0.3scaffold77607_1853-4341' '(gnl|cdd|36935 : 126.0) no description available & (at1g20140 : 101.0) SKP1-like 4 (SK4); CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 3 (TAIR:AT2G25700.1); Has 1439 Blast hits to 1435 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 560; Fungi - 180; Plants - 528; Viruses - 11; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|34800 : 92.0) no description available & (reliability: 202.0) & (original description: Putative fap3, Description = Fimbriata-associated protein, PFAM = PF03931;PF01466)' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'nbv0.5scaffold1017_184463-188096' '(gnl|cdd|36935 : 123.0) no description available & (at1g20140 : 112.0) SKP1-like 4 (SK4); CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 3 (TAIR:AT2G25700.1); Has 1439 Blast hits to 1435 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 560; Fungi - 180; Plants - 528; Viruses - 11; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|47816 : 89.9) no description available & (reliability: 224.0) & (original description: Putative fap2, Description = Fimbriata-associated protein, PFAM = PF01466;PF03931)' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'nbv0.5scaffold2581_259451-263437' '(at1g75950 : 207.0) SKP1 is core component of the SCF family of E3 ubiquitin ligases and serves to tether the rest of the complex to an F-box protein, which provides specificity in binding to ubiquitin ligase substrate proteins. Predominately expressed from leptotene to pachytene. Negatively regulates recombination. Interacts with P0, a silencing suppressor protein encoded by poleroviruses by means of a conserved minimal F-box motif.; S phase kinase-associated protein 1 (SKP1); FUNCTIONS IN: ubiquitin-protein ligase activity, protein binding; INVOLVED IN: negative regulation of DNA recombination, response to cadmium ion, mitosis, male meiosis, ubiquitin-dependent protein catabolic process; LOCATED IN: in 7 components; EXPRESSED IN: 35 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein (TAIR:AT5G42190.1); Has 1455 Blast hits to 1451 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 552; Fungi - 179; Plants - 538; Viruses - 11; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|36935 : 199.0) no description available & (gnl|cdd|34800 : 141.0) no description available & (reliability: 414.0) & (original description: Putative fap1, Description = SCF ubiquitin ligase, SKP1 component, PFAM = PF01466;PF03931)' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'nbv0.5scaffold5551_135152-136949' '(at1g20140 : 126.0) SKP1-like 4 (SK4); CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 3 (TAIR:AT2G25700.1); Has 1439 Blast hits to 1435 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 560; Fungi - 180; Plants - 528; Viruses - 11; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|36935 : 111.0) no description available & (gnl|cdd|34800 : 95.5) no description available & (reliability: 252.0) & (original description: Putative ASK4, Description = SKP1-like protein 4, PFAM = PF03931;PF01466)' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'niben044scf00012723ctg003_2368-4838' '(gnl|cdd|36935 : 111.0) no description available & (at1g20140 : 102.0) SKP1-like 4 (SK4); CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 3 (TAIR:AT2G25700.1); Has 1439 Blast hits to 1435 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 560; Fungi - 180; Plants - 528; Viruses - 11; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|34800 : 92.4) no description available & (reliability: 204.0) & (original description: Putative SSK1, Description = SLF-interacting SKP1, PFAM = PF03931;PF01466)' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'niben044scf00014373ctg002_10717-15074' '(at1g75950 : 211.0) SKP1 is core component of the SCF family of E3 ubiquitin ligases and serves to tether the rest of the complex to an F-box protein, which provides specificity in binding to ubiquitin ligase substrate proteins. Predominately expressed from leptotene to pachytene. Negatively regulates recombination. Interacts with P0, a silencing suppressor protein encoded by poleroviruses by means of a conserved minimal F-box motif.; S phase kinase-associated protein 1 (SKP1); FUNCTIONS IN: ubiquitin-protein ligase activity, protein binding; INVOLVED IN: negative regulation of DNA recombination, response to cadmium ion, mitosis, male meiosis, ubiquitin-dependent protein catabolic process; LOCATED IN: in 7 components; EXPRESSED IN: 35 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein (TAIR:AT5G42190.1); Has 1455 Blast hits to 1451 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 552; Fungi - 179; Plants - 538; Viruses - 11; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|36935 : 197.0) no description available & (gnl|cdd|34800 : 136.0) no description available & (reliability: 422.0) & (original description: Putative fap2, Description = Fimbriata-associated protein, PFAM = PF01466;PF03931)' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'niben044scf00059551ctg000_1-3137' '(at5g42190 : 211.0) Similar to SKP1 in yeast and humans which are involved in mitotic cell cycle control and ubiquitin mediated proteolysis.; E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein; CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: S phase kinase-associated protein 1 (TAIR:AT1G75950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36935 : 202.0) no description available & (gnl|cdd|34800 : 141.0) no description available & (reliability: 422.0) & (original description: Putative fap2, Description = Fimbriata-associated protein, PFAM = PF03931;PF01466)' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'niben101scf00595_280506-288895' '(at3g61415 : 322.0) SKP1-like 21 (SK21); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: SCF ubiquitin ligase complex; EXPRESSED IN: stem, fruit, root, inflorescence, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 20 (TAIR:AT2G45950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36935 : 110.0) no description available & (reliability: 644.0) & (original description: Putative skp1, Description = S-phase kinase-associated protein 1, PFAM = PF03931;PF01466)' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'niben101scf00620_15996-297499' '(gnl|cdd|36935 : 128.0) no description available & (at1g20140 : 102.0) SKP1-like 4 (SK4); CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 3 (TAIR:AT2G25700.1); Has 1439 Blast hits to 1435 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 560; Fungi - 180; Plants - 528; Viruses - 11; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|34800 : 88.2) no description available & (reliability: 204.0) & (original description: Putative SSK1, Description = SLF-interacting SKP1, PFAM = PF03931;PF01466)' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'niben101scf00620_139288-141761' '(gnl|cdd|36935 : 110.0) no description available & (at1g20140 : 102.0) SKP1-like 4 (SK4); CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 3 (TAIR:AT2G25700.1); Has 1439 Blast hits to 1435 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 560; Fungi - 180; Plants - 528; Viruses - 11; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|34800 : 90.5) no description available & (reliability: 204.0) & (original description: Putative SSK1, Description = SLF-interacting SKP1, PFAM = PF01466;PF03931)' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'niben101scf00620_204087-206578' '(gnl|cdd|36935 : 113.0) no description available & (at1g20140 : 110.0) SKP1-like 4 (SK4); CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 3 (TAIR:AT2G25700.1); Has 1439 Blast hits to 1435 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 560; Fungi - 180; Plants - 528; Viruses - 11; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|34800 : 89.7) no description available & (reliability: 220.0) & (original description: Putative PSK4, Description = SCF ubiquitin ligase, SKP1 component, PFAM = PF01466;PF03931)' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'niben101scf00626_99787-107979' '(at3g61415 : 379.0) SKP1-like 21 (SK21); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: SCF ubiquitin ligase complex; EXPRESSED IN: stem, fruit, root, inflorescence, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 20 (TAIR:AT2G45950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36935 : 123.0) no description available & (reliability: 758.0) & (original description: Putative ASK21, Description = SKP1-like protein 21, PFAM = PF01466)' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'niben101scf00648_2698-5204' '(at1g20140 : 132.0) SKP1-like 4 (SK4); CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 3 (TAIR:AT2G25700.1); Has 1439 Blast hits to 1435 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 560; Fungi - 180; Plants - 528; Viruses - 11; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|36935 : 131.0) no description available & (gnl|cdd|34800 : 110.0) no description available & (reliability: 264.0) & (original description: Putative SSK3, Description = SLF-interacting SKP1-like protein 3, PFAM = PF01466;PF03931)' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'niben101scf00917_355547-359160' '(at1g47056 : 588.0) Encodes an F-box protein. Based on genetic analysis appears to be functionally redundant with VFB2,3, and 4. When expression of all 4 genes is reduced plants show defects in growth and reduced expression of auxin response genes.; VIER F-box proteine 1 (VFB1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: stomatal complex, sepal, root, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: VIER F-box proteine 3 (TAIR:AT4G07400.1); Has 4631 Blast hits to 2722 proteins in 229 species: Archae - 0; Bacteria - 68; Metazoa - 1574; Fungi - 394; Plants - 2158; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|37158 : 125.0) no description available & (reliability: 1102.0) & (original description: Putative At1g47056, Description = F-box protein At1g47056, PFAM = PF12937;PF13516;PF13516)' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'niben101scf01413_47215-70983' '(at1g20140 : 158.0) SKP1-like 4 (SK4); CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 3 (TAIR:AT2G25700.1); Has 1439 Blast hits to 1435 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 560; Fungi - 180; Plants - 528; Viruses - 11; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|36935 : 141.0) no description available & (gnl|cdd|34800 : 110.0) no description available & (reliability: 316.0) & (original description: Putative ASK4, Description = SKP1-like protein 4, PFAM = PF01466;PF03931)' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'niben101scf02658_65514-69485' '(at1g75950 : 211.0) SKP1 is core component of the SCF family of E3 ubiquitin ligases and serves to tether the rest of the complex to an F-box protein, which provides specificity in binding to ubiquitin ligase substrate proteins. Predominately expressed from leptotene to pachytene. Negatively regulates recombination. Interacts with P0, a silencing suppressor protein encoded by poleroviruses by means of a conserved minimal F-box motif.; S phase kinase-associated protein 1 (SKP1); FUNCTIONS IN: ubiquitin-protein ligase activity, protein binding; INVOLVED IN: negative regulation of DNA recombination, response to cadmium ion, mitosis, male meiosis, ubiquitin-dependent protein catabolic process; LOCATED IN: in 7 components; EXPRESSED IN: 35 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein (TAIR:AT5G42190.1); Has 1455 Blast hits to 1451 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 552; Fungi - 179; Plants - 538; Viruses - 11; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|36935 : 197.0) no description available & (gnl|cdd|34800 : 141.0) no description available & (reliability: 422.0) & (original description: Putative fap1, Description = SCF ubiquitin ligase, SKP1 component, PFAM = PF01466;PF03931)' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'niben101scf03252_100349-102855' '(gnl|cdd|36935 : 123.0) no description available & (at4g34470 : 115.0) SKP1-like 12 (SK12); FUNCTIONS IN: ubiquitin-protein ligase activity, protein binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 11 (TAIR:AT4G34210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34800 : 94.7) no description available & (reliability: 230.0) & (original description: Putative ASK10, Description = SKP1-like protein 10, PFAM = PF01466;PF03931)' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'niben101scf04079_263384-265878' '(at1g20140 : 129.0) SKP1-like 4 (SK4); CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 3 (TAIR:AT2G25700.1); Has 1439 Blast hits to 1435 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 560; Fungi - 180; Plants - 528; Viruses - 11; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|36935 : 123.0) no description available & (gnl|cdd|34800 : 106.0) no description available & (reliability: 258.0) & (original description: Putative ASK4, Description = SKP1-like protein 4, PFAM = PF01466;PF03931)' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'niben101scf05135_14754-18403' '(at1g47056 : 582.0) Encodes an F-box protein. Based on genetic analysis appears to be functionally redundant with VFB2,3, and 4. When expression of all 4 genes is reduced plants show defects in growth and reduced expression of auxin response genes.; VIER F-box proteine 1 (VFB1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: stomatal complex, sepal, root, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: VIER F-box proteine 3 (TAIR:AT4G07400.1); Has 4631 Blast hits to 2722 proteins in 229 species: Archae - 0; Bacteria - 68; Metazoa - 1574; Fungi - 394; Plants - 2158; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|37158 : 124.0) no description available & (reliability: 1150.0) & (original description: Putative At1g47056, Description = F-box protein At1g47056, PFAM = PF13516;PF13516;PF12937)' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'niben101scf05372_3184-7326' '(at5g59140 : 151.0) BTB/POZ domain-containing protein; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38683 : 99.3) no description available & (reliability: 302.0) & (original description: Putative TCEB1, Description = Transcription elongation factor B polypeptide 1, PFAM = PF03931)' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'niben101scf05458_67503-72318' '(at5g57900 : 294.0) F-box protein, interacts with SKP1/ASK1 subunit of SCF ubiquitin ligase in a glucose-dependent manner; SKP1 interacting partner 1 (SKIP1); CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT4G30640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37158 : 87.1) no description available & (reliability: 588.0) & (original description: Putative SKIP1, Description = F-box protein SKIP1, PFAM = )' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'niben101scf05848_9654-11451' '(at1g20140 : 119.0) SKP1-like 4 (SK4); CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 3 (TAIR:AT2G25700.1); Has 1439 Blast hits to 1435 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 560; Fungi - 180; Plants - 528; Viruses - 11; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|36935 : 106.0) no description available & (gnl|cdd|34800 : 96.3) no description available & (reliability: 238.0) & (original description: Putative fap1, Description = SKP1-like protein 1B, PFAM = PF01466;PF03931)' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'niben101scf06437_384802-387296' '(at1g20140 : 133.0) SKP1-like 4 (SK4); CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 3 (TAIR:AT2G25700.1); Has 1439 Blast hits to 1435 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 560; Fungi - 180; Plants - 528; Viruses - 11; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|36935 : 126.0) no description available & (gnl|cdd|34800 : 105.0) no description available & (reliability: 266.0) & (original description: Putative ASK4, Description = SKP1-like protein 4, PFAM = PF03931;PF01466)' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'niben101scf06809_101982-105816' '(at5g42190 : 213.0) Similar to SKP1 in yeast and humans which are involved in mitotic cell cycle control and ubiquitin mediated proteolysis.; E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein; CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: S phase kinase-associated protein 1 (TAIR:AT1G75950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36935 : 202.0) no description available & (gnl|cdd|34800 : 139.0) no description available & (reliability: 426.0) & (original description: Putative fap2, Description = Fimbriata-associated protein, PFAM = PF01466;PF03931)' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'niben101scf07614_392905-397371' '(at1g75950 : 212.0) SKP1 is core component of the SCF family of E3 ubiquitin ligases and serves to tether the rest of the complex to an F-box protein, which provides specificity in binding to ubiquitin ligase substrate proteins. Predominately expressed from leptotene to pachytene. Negatively regulates recombination. Interacts with P0, a silencing suppressor protein encoded by poleroviruses by means of a conserved minimal F-box motif.; S phase kinase-associated protein 1 (SKP1); FUNCTIONS IN: ubiquitin-protein ligase activity, protein binding; INVOLVED IN: negative regulation of DNA recombination, response to cadmium ion, mitosis, male meiosis, ubiquitin-dependent protein catabolic process; LOCATED IN: in 7 components; EXPRESSED IN: 35 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein (TAIR:AT5G42190.1); Has 1455 Blast hits to 1451 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 552; Fungi - 179; Plants - 538; Viruses - 11; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|36935 : 199.0) no description available & (gnl|cdd|34800 : 139.0) no description available & (reliability: 424.0) & (original description: Putative ASK13, Description = SKP1-like protein 13, PFAM = PF03931;PF01466)' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'niben101scf08053_143999-147802' '(gnl|cdd|36935 : 119.0) no description available & (at1g20140 : 110.0) SKP1-like 4 (SK4); CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 3 (TAIR:AT2G25700.1); Has 1439 Blast hits to 1435 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 560; Fungi - 180; Plants - 528; Viruses - 11; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|47816 : 85.3) no description available & (reliability: 220.0) & (original description: Putative fap2, Description = Fimbriata-associated protein, PFAM = PF03931;PF01466)' T '29.5.11.4.3.1' 'protein.degradation.ubiquitin.E3.SCF.SKP' 'niben101scf29276_977-3887' '(gnl|cdd|36935 : 129.0) no description available & (at1g20140 : 116.0) SKP1-like 4 (SK4); CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 3 (TAIR:AT2G25700.1); Has 1439 Blast hits to 1435 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 560; Fungi - 180; Plants - 528; Viruses - 11; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|34800 : 106.0) no description available & (reliability: 232.0) & (original description: Putative ASK11, Description = SKP1-like protein 11, PFAM = PF03931;PF01466)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold658_34843-39182' '(at5g49980 : 865.0) auxin F-box protein 5 (AFB5); CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT4G24390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37158 : 169.0) no description available & (reliability: 1672.0) & (original description: Putative At5g49980, Description = Transport inhibitor response 1-like protein, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold2323_78063-82460' '(at1g61330 : 95.1) FBD, F-box and Leucine Rich Repeat domains containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: FBD / Leucine Rich Repeat domains containing protein (TAIR:AT1G61320.1); Has 1015 Blast hits to 1010 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1009; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold3363_63296-72412' '(at5g45360 : 340.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Herpesvirus UL92 (InterPro:IPR004289); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 680.0) & (original description: Putative SKIP31, Description = F-box protein SKIP31, PFAM = PF12937;PF03048)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold4427_17078-21043' '(at2g18280 : 484.0) Member of TLP family; tubby like protein 2 (TLP2); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 3 (TAIR:AT2G47900.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37713 : 412.0) no description available & (gnl|cdd|85281 : 291.0) no description available & (reliability: 892.0) & (original description: Putative TULP5, Description = Tubby-like F-box protein 5, PFAM = PF01167;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold6163_43106-48073' '(at5g52880 : 197.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative , Description = F-box-like protein, PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold7915_3786-46623' '(at3g06240 : 187.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT4G12560.2); Has 2015 Blast hits to 1993 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2013; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative , Description = , PFAM = PF00646;PF07734;PF07734)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold12526_1983-17971' '(at2g27210 : 419.0) BRI1 suppressor 1 (BSU1)-like 3 (BSL3); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, iron ion binding, phosphoprotein phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Metallophosphoesterase (InterPro:IPR004843), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 2 (TAIR:AT1G08420.2). & (q2qm47|bsl2_orysa : 402.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35600 : 183.0) no description available & (reliability: 838.0) & (original description: Putative BSL1, Description = Serine/threonine-protein phosphatase, PFAM = PF13418;PF13418)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold13274_27927-33437' '(at1g27340 : 597.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G15710.1); Has 1110 Blast hits to 1104 proteins in 52 species: Archae - 0; Bacteria - 1; Metazoa - 2; Fungi - 0; Plants - 1106; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 1194.0) & (original description: Putative FBX6, Description = F-box only protein 6, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold17013_33472-37087' '(at1g67190 : 524.0) F-box/RNI-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT1G10780.1). & (reliability: 1048.0) & (original description: Putative At1g67190, Description = F-box/LRR-repeat protein At1g67190, PFAM = PF12937;PF12799)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold18126_18515-22245' '(at1g74875 : 89.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G67623.1); Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative PGSC0003DMG400021580, Description = F-box family protein, putative, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold22890_175-4353' '(at3g12350 : 374.0) F-box family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364). & (reliability: 748.0) & (original description: Putative , Description = , PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold23057_20353-23954' '(at1g47056 : 587.0) Encodes an F-box protein. Based on genetic analysis appears to be functionally redundant with VFB2,3, and 4. When expression of all 4 genes is reduced plants show defects in growth and reduced expression of auxin response genes.; VIER F-box proteine 1 (VFB1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: stomatal complex, sepal, root, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: VIER F-box proteine 3 (TAIR:AT4G07400.1); Has 4631 Blast hits to 2722 proteins in 229 species: Archae - 0; Bacteria - 68; Metazoa - 1574; Fungi - 394; Plants - 2158; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|37158 : 125.0) no description available & (reliability: 1174.0) & (original description: Putative At1g47056, Description = F-box protein At1g47056, PFAM = PF13516;PF13516;PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold27049_8053-12562' '(at3g26000 : 271.0) Ribonuclease inhibitor; BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT3G27290.1); Has 103 Blast hits to 103 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 22; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 542.0) & (original description: Putative , Description = , PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold31513_13929-17203' '(at2g02870 : 520.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G14330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39642 : 101.0) no description available & (reliability: 1040.0) & (original description: Putative SKIP11, Description = F-box/kelch-repeat protein SKIP11, PFAM = PF01344;PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold35575_4359-7513' '(at5g46170 : 479.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G18380.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 958.0) & (original description: Putative At5g46170, Description = F-box protein At5g46170, PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold36493_14408-18249' '(at5g39450 : 511.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G39460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1022.0) & (original description: Putative ARALYDRAFT_916356, Description = F-box family protein, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold37682_9839-20576' '(at1g78280 : 686.0) transferases, transferring glycosyl groups; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Transcription factor jumonji (InterPro:IPR013129), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06550.1); Has 1510 Blast hits to 1497 proteins in 307 species: Archae - 0; Bacteria - 312; Metazoa - 658; Fungi - 137; Plants - 199; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink). & (gnl|cdd|37341 : 424.0) no description available & (reliability: 1372.0) & (original description: Putative psr, Description = Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6, PFAM = PF12937;PF13621)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold38056_1-1707' '(at1g74510 : 193.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT2G02870.3); Has 7938 Blast hits to 4441 proteins in 274 species: Archae - 4; Bacteria - 392; Metazoa - 6058; Fungi - 35; Plants - 1067; Viruses - 39; Other Eukaryotes - 343 (source: NCBI BLink). & (reliability: 386.0) & (original description: Putative SKIP11, Description = F-box/kelch-repeat protein SKIP11, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold46378_6392-10449' '(at1g25280 : 593.0) Member of TLP family; tubby like protein 10 (TLP10); FUNCTIONS IN: phosphoric diester hydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 5 (TAIR:AT1G43640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37713 : 444.0) no description available & (gnl|cdd|85281 : 342.0) no description available & (reliability: 1122.0) & (original description: Putative TULP14, Description = Tubby-like F-box protein 14, PFAM = PF01167;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold50045_1928-7014' '(at5g07610 : 102.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G49610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold56750_1-5029' '(at1g70590 : 385.0) F-box family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein (TAIR:AT1G18260.1); Has 16059 Blast hits to 6577 proteins in 1289 species: Archae - 0; Bacteria - 11525; Metazoa - 502; Fungi - 723; Plants - 391; Viruses - 15; Other Eukaryotes - 2903 (source: NCBI BLink). & (gnl|cdd|36763 : 103.0) no description available & (gnl|cdd|31133 : 87.4) no description available & (reliability: 770.0) & (original description: Putative At1g70590, Description = F-box protein At1g70590, PFAM = PF00646;PF08238;PF08238;PF08238;PF08238;PF08238)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold58774_8326-12271' '(at4g05460 : 210.0) RNI-like superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT4G05497.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37158 : 101.0) no description available & (reliability: 420.0) & (original description: Putative SKIP19, Description = F-box protein SKIP19, PFAM = PF13516;PF13516;PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold59114_5190-10978' '(at4g03220 : 387.0) Protein with RNI-like/FBD-like domains; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT3G59210.4); Has 1478 Blast hits to 1464 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1476; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 774.0) & (original description: Putative At4g03220, Description = Putative F-box/FBD/LRR-repeat protein At4g03220, PFAM = PF00646;PF08387)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold62743_4377-8665' '(at4g15060 : 80.5) CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G55660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold66371_1403-9008' '(at5g27920 : 568.0) F-box family protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT5G01720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39542 : 118.0) no description available & (reliability: 1136.0) & (original description: Putative , Description = Ubiquitin-protein ligase, putative, PFAM = PF13516;PF13516;PF13516;PF13516;PF13516;PF13516;PF13516)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold73346_841-3961' '(at3g48880 : 400.0) RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT4G11580.1); Has 401 Blast hits to 392 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 52; Fungi - 0; Plants - 349; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 800.0) & (original description: Putative At3g48880, Description = F-box/LRR-repeat protein At3g48880, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold80720_1452-4666' '(at5g26960 : 399.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G67480.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 798.0) & (original description: Putative At5g26960, Description = F-box/kelch-repeat protein At5g26960, PFAM = PF01344;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold83997_764-4500' '(at5g42350 : 665.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G42360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1330.0) & (original description: Putative At5g42350, Description = F-box/kelch-repeat protein At5g42350, PFAM = PF00646;PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold87989_996-5750' '(at2g27210 : 369.0) BRI1 suppressor 1 (BSU1)-like 3 (BSL3); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, iron ion binding, phosphoprotein phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Metallophosphoesterase (InterPro:IPR004843), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 2 (TAIR:AT1G08420.2). & (q2qm47|bsl2_orysa : 337.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35600 : 165.0) no description available & (reliability: 738.0) & (original description: Putative BSL1, Description = Serine/threonine-protein phosphatase, PFAM = PF13418;PF13418)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.3scaffold89782_1188-4480' '(at4g22030 : 328.0) CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G04480.1); Has 486 Blast hits to 359 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 482; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative BnaA03g25450D, Description = BnaA03g25450D protein, PFAM = PF14476)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.5scaffold503_463624-467394' '(at1g47270 : 438.0) Member of TLP family; tubby like protein 6 (TLP6); FUNCTIONS IN: phosphoric diester hydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 2 (TAIR:AT2G18280.2). & (gnl|cdd|37713 : 376.0) no description available & (gnl|cdd|85281 : 267.0) no description available & (reliability: 876.0) & (original description: Putative TULP6, Description = Tubby-like F-box protein 6, PFAM = PF00646;PF01167)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.5scaffold767_387707-391318' '(at3g59200 : 148.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT4G14096.1); Has 2158 Blast hits to 2093 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2158; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative , Description = , PFAM = PF08387;PF07723;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.5scaffold857_380617-387843' '(at1g13570 : 124.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G56370.2); Has 1866 Blast hits to 1838 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1866; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.5scaffold972_12-287658' '(at2g27210 : 1566.0) BRI1 suppressor 1 (BSU1)-like 3 (BSL3); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, iron ion binding, phosphoprotein phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Metallophosphoesterase (InterPro:IPR004843), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 2 (TAIR:AT1G08420.2). & (q2qm47|bsl2_orysa : 1503.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35595 : 369.0) no description available & (gnl|cdd|47495 : 311.0) no description available & (reliability: 3132.0) & (original description: Putative BSL3, Description = Serine/threonine-protein phosphatase BSL3, PFAM = PF13418;PF13418;PF07646;PF00149)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.5scaffold990_391063-394277' '(at5g26960 : 389.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G67480.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 778.0) & (original description: Putative At5g26960, Description = Hypothetical_protein, PFAM = PF00646;PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.5scaffold1141_481645-492070' '(at2g02240 : 265.0) maternal effect embryo arrest 66 (MEE66); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B2 (TAIR:AT2G02250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 500.0) & (original description: Putative At2g02240, Description = F-box protein At2g02240, PFAM = PF14299)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.5scaffold1214_283898-287019' '(at3g48880 : 404.0) RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT4G11580.1); Has 401 Blast hits to 392 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 52; Fungi - 0; Plants - 349; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 808.0) & (original description: Putative At3g48880, Description = F-box/LRR-repeat protein At3g48880, PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.5scaffold1484_128377-134233' '(at1g55270 : 704.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G67480.2); Has 9614 Blast hits to 5501 proteins in 487 species: Archae - 10; Bacteria - 408; Metazoa - 7370; Fungi - 10; Plants - 1320; Viruses - 170; Other Eukaryotes - 326 (source: NCBI BLink). & (gnl|cdd|39642 : 134.0) no description available & (reliability: 1408.0) & (original description: Putative At1g55270, Description = F-box/kelch-repeat protein At1g55270, PFAM = PF01344;PF01344;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.5scaffold1561_250777-257818' '(at4g10925 : 322.0) Nuclear transport factor 2 (NTF2) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G23960.1). & (reliability: 644.0) & (original description: Putative SKIP8, Description = F-box protein SKIP8, PFAM = PF13474)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.5scaffold1792_302168-320289' '(at1g78280 : 1107.0) transferases, transferring glycosyl groups; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Transcription factor jumonji (InterPro:IPR013129), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06550.1); Has 1510 Blast hits to 1497 proteins in 307 species: Archae - 0; Bacteria - 312; Metazoa - 658; Fungi - 137; Plants - 199; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink). & (gnl|cdd|37341 : 424.0) no description available & (reliability: 2214.0) & (original description: Putative psr, Description = Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6, PFAM = PF13621;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.5scaffold1792_304361-320334' '(at1g78280 : 958.0) transferases, transferring glycosyl groups; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Transcription factor jumonji (InterPro:IPR013129), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06550.1); Has 1510 Blast hits to 1497 proteins in 307 species: Archae - 0; Bacteria - 312; Metazoa - 658; Fungi - 137; Plants - 199; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink). & (gnl|cdd|37341 : 430.0) no description available & (reliability: 1916.0) & (original description: Putative psr, Description = Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6, PFAM = PF00646;PF13621)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.5scaffold1797_313031-319485' '(at3g54650 : 546.0) FBL17; FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: generative cell mitosis, seed development, embryo development, ubiquitin-dependent protein catabolic process, pollen development; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); Has 1738 Blast hits to 1195 proteins in 149 species: Archae - 0; Bacteria - 27; Metazoa - 733; Fungi - 89; Plants - 663; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (reliability: 1092.0) & (original description: Putative FBL17, Description = F-box/LRR-repeat protein 17, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.5scaffold2116_194779-201701' '(at4g00755 : 220.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); Has 80 Blast hits to 80 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 11; Plants - 57; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative PGSC0003DMG400027774, Description = , PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.5scaffold2501_4138-6797' '(at4g24210 : 105.0) F-box protein that is involved in GA signaling. Regulates seed germination. Component of E3 ubiquitin complex. Interacts with DELLA proteins.; SLEEPY1 (SLY1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G48170.1); Has 122 Blast hits to 122 proteins in 25 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 9; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative GID2, Description = F-box protein GID2, PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.5scaffold2526_7851-16640' '(at3g58530 : 454.0) RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT5G23340.1); Has 9313 Blast hits to 3891 proteins in 246 species: Archae - 0; Bacteria - 470; Metazoa - 3686; Fungi - 1044; Plants - 3046; Viruses - 9; Other Eukaryotes - 1058 (source: NCBI BLink). & (gnl|cdd|39542 : 98.5) no description available & (reliability: 908.0) & (original description: Putative At3g58530, Description = F-box protein At3g58530, PFAM = PF13516;PF13516)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.5scaffold3213_202703-207064' '(at4g05460 : 191.0) RNI-like superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT4G05497.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37158 : 91.7) no description available & (reliability: 382.0) & (original description: Putative C6L9, Description = F-box protein SKIP19, PFAM = PF13516;PF13516;PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.5scaffold3757_122405-133137' '(at2g03530 : 504.0) Mediate high-affinity uracil and 5-FU (a toxic uracil analogue) transport when expressed in yeast and Xenopus oocytes.Involved in allantoin transport.; ureide permease 2 (UPS2); FUNCTIONS IN: uracil:cation symporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: ureide permease 1 (TAIR:AT2G03590.1); Has 297 Blast hits to 263 proteins in 72 species: Archae - 0; Bacteria - 145; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|70624 : 501.0) no description available & (q41706|upsa3_vigun : 457.0) Probable ureide permease A3 (VuA3) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 1008.0) & (original description: Putative UPS2, Description = Ureide permease 2, PFAM = PF07168)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.5scaffold3809_105330-108376' '(at4g04480 : 255.0) unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: flower, pollen tube; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT4G22030.1); Has 78 Blast hits to 78 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 502.0) & (original description: Putative BnaA03g25450D, Description = BnaA03g25450D protein, PFAM = PF14476)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.5scaffold4214_84390-88311' '(at5g39450 : 486.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G39460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 972.0) & (original description: Putative ARALYDRAFT_916356, Description = F-box family protein, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.5scaffold5145_60228-64001' '(gnl|cdd|39642 : 136.0) no description available & (at1g16250 : 92.8) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G63220.2); Has 9062 Blast hits to 5094 proteins in 277 species: Archae - 4; Bacteria - 620; Metazoa - 6949; Fungi - 23; Plants - 1110; Viruses - 34; Other Eukaryotes - 322 (source: NCBI BLink). & (reliability: 185.6) & (original description: Putative Sb04g036460, Description = Putative uncharacterized protein Sb04g036460, PFAM = PF01344;PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.5scaffold5307_113847-121014' '(at3g52030 : 240.0) F-box family protein with WD40/YVTN repeat doamin; FUNCTIONS IN: molecular_function unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), F-box domain, Skp2-like (InterPro:IPR022364), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781). & (reliability: 480.0) & (original description: Putative At3g52030, Description = F-box/WD-40 repeat-containing protein At3g52030, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.5scaffold5394_119376-130901' '(at5g63520 : 202.0) CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364), FIST C domain (InterPro:IPR019494), FIST domain, N-terminal (InterPro:IPR013702); Has 137 Blast hits to 137 proteins in 56 species: Archae - 0; Bacteria - 88; Metazoa - 6; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative At5g63520, Description = F-box/LRR-repeat protein At5g63520, PFAM = PF00646;PF08495)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.5scaffold6306_1962-5160' '(at1g55000 : 291.0) peptidoglycan-binding LysM domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), F-box domain, Skp2-like (InterPro:IPR022364), Peptidoglycan-binding Lysin subgroup (InterPro:IPR002482); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38061 : 103.0) no description available & (reliability: 582.0) & (original description: Putative At1g55000, Description = F-box protein At1g55000, PFAM = PF00646;PF01476)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.5scaffold6504_19051-22546' '(at3g06240 : 84.3) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT4G12560.2); Has 2015 Blast hits to 1993 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2013; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative PGSC0003DMG400013290, Description = Putative ovule protein, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.5scaffold7652_11337-14782' '(at2g17030 : 118.0) CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT2G17036.1); Has 414 Blast hits to 409 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 414; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF03478)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'nbv0.5scaffold9223_2071-4858' '(at4g05460 : 160.0) RNI-like superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT4G05497.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00000980ctg003_1790-7910' '(at1g13570 : 268.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G56370.2); Has 1866 Blast hits to 1838 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1866; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative At1g13570, Description = F-box/FBD/LRR-repeat protein At1g13570, PFAM = PF08387;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00001062ctg014_757-4466' '(at4g08980 : 302.0) Encodes an F-box gene that is a novel negative regulator of AGO1 protein levels and may play a role in ABA signalling and/or response.; F-BOX WITH WD-40 2 (FBW2); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process, posttranscriptional regulation of gene expression; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT4G05460.1); Has 1165 Blast hits to 1048 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 539; Fungi - 16; Plants - 571; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 604.0) & (original description: Putative FBW2, Description = F-box protein FBW2, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00001224ctg003_11011-12969' '(at4g12560 : 113.0) Encodes CPR30 (Constitutive Expresser of PR Genes 30), a F-Box protein that functions as a negative regulator of defense response.; CONSTITUTIVE EXPRESSER OF PR GENES 30 (CPR30); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: negative regulation of defense response; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box associated ubiquitination effector family protein (TAIR:AT4G22390.1); Has 1743 Blast hits to 1730 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1741; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00001907ctg027_11550-21215' '(at5g02930 : 103.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT5G02910.1); Has 2185 Blast hits to 2152 proteins in 42 species: Archae - 0; Bacteria - 2; Metazoa - 16; Fungi - 0; Plants - 2164; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00001923ctg002_12048-17188' '(at3g25750 : 96.3) CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT2G26160.1); Has 337 Blast hits to 336 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 337; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative , Description = , PFAM = PF03478)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00002176ctg015_3891-7895' '(at2g18280 : 458.0) Member of TLP family; tubby like protein 2 (TLP2); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 3 (TAIR:AT2G47900.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37713 : 391.0) no description available & (gnl|cdd|85281 : 278.0) no description available & (reliability: 854.0) & (original description: Putative TULP1, Description = Tubby-like F-box protein, PFAM = PF00646;PF01167)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00002513ctg001_9492-13256' '(at5g21040 : 622.0) Encodes an F-box containing protein that interacts physically with BHLH32 and appears to be involved in mediating phosphate starvation responses.; F-box protein 2 (FBX2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cellular response to phosphate starvation; LOCATED IN: SCF ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), F-box domain, cyclin-like (InterPro:IPR001810), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), F-box domain, Skp2-like (InterPro:IPR022364), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1). & (gnl|cdd|29257 : 120.0) no description available & (gnl|cdd|35495 : 90.9) no description available & (reliability: 1244.0) & (original description: Putative At5g21040, Description = F-box/WD-40 repeat-containing protein At5g21040, PFAM = PF00646;PF00400;PF00400)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00004630ctg004_1567-4290' '(at2g03530 : 229.0) Mediate high-affinity uracil and 5-FU (a toxic uracil analogue) transport when expressed in yeast and Xenopus oocytes.Involved in allantoin transport.; ureide permease 2 (UPS2); FUNCTIONS IN: uracil:cation symporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: ureide permease 1 (TAIR:AT2G03590.1); Has 297 Blast hits to 263 proteins in 72 species: Archae - 0; Bacteria - 145; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|70624 : 198.0) no description available & (q41706|upsa3_vigun : 176.0) Probable ureide permease A3 (VuA3) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 458.0) & (original description: Putative A3, Description = Putative ureide permease A3, PFAM = PF07168)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00005367ctg001_1-1786' '(at1g80570 : 651.0) RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT4G15475.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37158 : 89.0) no description available & (reliability: 1302.0) & (original description: Putative FBL14, Description = F-box/LRR-repeat protein 14, PFAM = PF12937;PF13516;PF13516)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00005655ctg019_25101-29952' '(at1g13570 : 134.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G56370.2); Has 1866 Blast hits to 1838 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1866; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00006361ctg002_1-10750' '(at2g27210 : 858.0) BRI1 suppressor 1 (BSU1)-like 3 (BSL3); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, iron ion binding, phosphoprotein phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Metallophosphoesterase (InterPro:IPR004843), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 2 (TAIR:AT1G08420.2). & (q2qm47|bsl2_orysa : 801.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35600 : 260.0) no description available & (reliability: 1716.0) & (original description: Putative BSL1, Description = Serine/threonine-protein phosphatase, PFAM = PF13418;PF13418;PF07646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00006392ctg000_233-2773' '(at3g26000 : 129.0) Ribonuclease inhibitor; BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT3G27290.1); Has 103 Blast hits to 103 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 22; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative SKIP14, Description = F-box protein SKIP14, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00006733ctg012_1686-6723' '(at2g25490 : 714.0) Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3.; EIN3-binding F box protein 1 (EBF1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: EIN3-binding F box protein 2 (TAIR:AT5G25350.1); Has 13069 Blast hits to 4728 proteins in 296 species: Archae - 0; Bacteria - 528; Metazoa - 5097; Fungi - 1628; Plants - 4199; Viruses - 9; Other Eukaryotes - 1608 (source: NCBI BLink). & (gnl|cdd|39542 : 149.0) no description available & (reliability: 1428.0) & (original description: Putative EBF1, Description = EIN3-binding F-box protein 1, PFAM = PF13516;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00006816ctg002_3988-7562' '(at5g49610 : 82.8) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G33530.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative , Description = Concanavalin A-like lectin/glucanase, subgroup, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00007356ctg017_4831-7740' '(at1g22040 : 561.0) Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G55270.1); Has 10813 Blast hits to 5578 proteins in 328 species: Archae - 18; Bacteria - 659; Metazoa - 8206; Fungi - 35; Plants - 1449; Viruses - 72; Other Eukaryotes - 374 (source: NCBI BLink). & (gnl|cdd|39642 : 123.0) no description available & (reliability: 1122.0) & (original description: Putative At1g22040, Description = F-box/kelch-repeat protein At1g22040, PFAM = PF12937;PF01344;PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00008300ctg006_9692-11987' '(at5g48170 : 101.0) encodes an F-box protein whose protein sequence is similar to SLY1, which belongs to SCF-SLY1 E3 ligase complex. SCF-SLY1 E3 ligase degrades DELLA proteins that are involved in promoting growth. Overexpression of SLY2 can partially compensate sly1-10 mutant phenotype of dwarfism.; SLEEPY2 (SLY2); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G24210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative Sb01g044060, Description = Putative uncharacterized protein Sb01g044060, PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00008387ctg005_13041-16480' '(at1g67190 : 528.0) F-box/RNI-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT1G10780.1). & (reliability: 1056.0) & (original description: Putative At1g67190, Description = F-box/LRR-repeat protein At1g67190, PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00008639ctg004_85-2816' '(at4g12560 : 95.1) Encodes CPR30 (Constitutive Expresser of PR Genes 30), a F-Box protein that functions as a negative regulator of defense response.; CONSTITUTIVE EXPRESSER OF PR GENES 30 (CPR30); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: negative regulation of defense response; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box associated ubiquitination effector family protein (TAIR:AT4G22390.1); Has 1743 Blast hits to 1730 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1741; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative , Description = Putative F-box domain containing protein, identical, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00009059ctg003_117-2917' '(at1g74510 : 186.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT2G02870.3); Has 7938 Blast hits to 4441 proteins in 274 species: Archae - 4; Bacteria - 392; Metazoa - 6058; Fungi - 35; Plants - 1067; Viruses - 39; Other Eukaryotes - 343 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative SKIP11, Description = F-box/kelch-repeat protein SKIP11, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00009661ctg010_1-7335' '(at3g52030 : 348.0) F-box family protein with WD40/YVTN repeat doamin; FUNCTIONS IN: molecular_function unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), F-box domain, Skp2-like (InterPro:IPR022364), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781). & (gnl|cdd|29257 : 80.4) no description available & (reliability: 696.0) & (original description: Putative BnaA03g57050D, Description = BnaA03g57050D protein, PFAM = PF00400)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00012763ctg018_3742-7630' '(at1g47270 : 458.0) Member of TLP family; tubby like protein 6 (TLP6); FUNCTIONS IN: phosphoric diester hydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 2 (TAIR:AT2G18280.2). & (gnl|cdd|37713 : 391.0) no description available & (gnl|cdd|85281 : 284.0) no description available & (reliability: 916.0) & (original description: Putative TULP6, Description = Tubby-like F-box protein 6, PFAM = PF00646;PF01167)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00013108ctg024_1-11375' '(at4g15475 : 657.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: EIN3-binding F box protein 2 (TAIR:AT5G25350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39542 : 134.0) no description available & (reliability: 1314.0) & (original description: Putative FBL4, Description = F-box/LRR-repeat protein 4, PFAM = PF13516;PF13516;PF13516;PF13516;PF13516;PF13516;PF13516)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00013314ctg013_6539-9547' '(at1g61340 : 93.6) F-box family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G21510.1). & (reliability: 184.0) & (original description: Putative)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00014139ctg002_1-4582' '(at3g26000 : 273.0) Ribonuclease inhibitor; BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT3G27290.1); Has 103 Blast hits to 103 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 22; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 546.0) & (original description: Putative , Description = , PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00017299ctg000_1-3643' '(at2g02360 : 153.0) phloem protein 2-B10 (PP2-B10); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G02240.1); Has 572 Blast hits to 558 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 567; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative PP2B2, Description = AtPP2-B2, PFAM = PF14299)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00017334ctg022_1-6785' '(at1g16250 : 502.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G63220.2); Has 9062 Blast hits to 5094 proteins in 277 species: Archae - 4; Bacteria - 620; Metazoa - 6949; Fungi - 23; Plants - 1110; Viruses - 34; Other Eukaryotes - 322 (source: NCBI BLink). & (gnl|cdd|39642 : 104.0) no description available & (reliability: 1004.0) & (original description: Putative At1g16250, Description = F-box/kelch-repeat protein At1g16250, PFAM = PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00018651ctg005_1-4668' '(at2g25490 : 602.0) Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3.; EIN3-binding F box protein 1 (EBF1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: EIN3-binding F box protein 2 (TAIR:AT5G25350.1); Has 13069 Blast hits to 4728 proteins in 296 species: Archae - 0; Bacteria - 528; Metazoa - 5097; Fungi - 1628; Plants - 4199; Viruses - 9; Other Eukaryotes - 1608 (source: NCBI BLink). & (gnl|cdd|37158 : 138.0) no description available & (reliability: 1204.0) & (original description: Putative EBF1, Description = EIN3-binding F box protein 1, PFAM = PF13516;PF13516;PF13516;PF13516;PF13516;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00018888ctg023_1-4084' '(at3g03360 : 105.0) F-box/RNI-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT3G18150.1); Has 2219 Blast hits to 2186 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 6; Plants - 2203; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative PGSC0003DMG400013717, Description = , PFAM = PF08387;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00019160ctg018_641-4021' '(at1g76920 : 441.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Kelch repeat type 2 (InterPro:IPR011498); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G61590.2); Has 279 Blast hits to 279 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 279; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 882.0) & (original description: Putative SKIP15, Description = SKP1-interacting partner 15, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00019800ctg006_4742-11893' '(at2g27210 : 708.0) BRI1 suppressor 1 (BSU1)-like 3 (BSL3); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, iron ion binding, phosphoprotein phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Metallophosphoesterase (InterPro:IPR004843), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 2 (TAIR:AT1G08420.2). & (q2qm47|bsl2_orysa : 706.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35595 : 348.0) no description available & (gnl|cdd|29063 : 294.0) no description available & (reliability: 1416.0) & (original description: Putative TOPP1, Description = Serine/threonine-protein phosphatase PP1 isozyme 1, PFAM = PF00149)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00019800ctg008_1732-5049' '(at2g27210 : 380.0) BRI1 suppressor 1 (BSU1)-like 3 (BSL3); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, iron ion binding, phosphoprotein phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Metallophosphoesterase (InterPro:IPR004843), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 2 (TAIR:AT1G08420.2). & (q2qm47|bsl2_orysa : 351.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35600 : 162.0) no description available & (reliability: 760.0) & (original description: Putative BSL1, Description = Serine/threonine-protein phosphatase, PFAM = PF13418)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00020113ctg004_1-4535' '(q2qm47|bsl2_orysa : 678.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (at2g27210 : 677.0) BRI1 suppressor 1 (BSU1)-like 3 (BSL3); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, iron ion binding, phosphoprotein phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Metallophosphoesterase (InterPro:IPR004843), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 2 (TAIR:AT1G08420.2). & (gnl|cdd|35595 : 346.0) no description available & (gnl|cdd|47495 : 295.0) no description available & (reliability: 1354.0) & (original description: Putative GLC7, Description = Serine/threonine-protein phosphatase PP1-2, PFAM = PF00149)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00021406ctg007_598-8147' '(at2g44900 : 390.0) ARABIDILLO-1 and its homolog, ARABIDILLO -2, are unique among Arabidopsis Arm-repeat proteins in having an F-box motif and fall into a phylogenetically distinct subgroup from other plant Arm-repeat proteins Similar to arm repeat protein in rice and armadillo/beta-catenin repeat family protein / F-box family protein in Dictyostelium. ARABIDILLO-1 promote lateral root development. Mutant plants form fewer lateral roots, while ARABIDILLO-1-overexpressing lines produce more lateral roots than wild-type seedlings.; ARABIDILLO-1 (ARABIDILLO-1); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: lateral root development; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARABIDILLO-2 (TAIR:AT3G60350.1); Has 10074 Blast hits to 5287 proteins in 284 species: Archae - 0; Bacteria - 24; Metazoa - 4121; Fungi - 736; Plants - 4117; Viruses - 0; Other Eukaryotes - 1076 (source: NCBI BLink). & (reliability: 780.0) & (original description: Putative FBX5, Description = Protein ARABIDILLO 1, PFAM = PF00514;PF00514;PF00514)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00025428ctg003_17549-24277' '(at1g70590 : 394.0) F-box family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein (TAIR:AT1G18260.1); Has 16059 Blast hits to 6577 proteins in 1289 species: Archae - 0; Bacteria - 11525; Metazoa - 502; Fungi - 723; Plants - 391; Viruses - 15; Other Eukaryotes - 2903 (source: NCBI BLink). & (gnl|cdd|36763 : 100.0) no description available & (gnl|cdd|31133 : 82.0) no description available & (reliability: 788.0) & (original description: Putative At1g70590, Description = F-box protein At1g70590, PFAM = PF12937;PF08238;PF08238;PF08238;PF08238;PF08238)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00025471ctg002_1-3069' '(at1g68050 : 902.0) Encodes FKF1, a flavin-binding kelch repeat F box protein, is clock-controlled, regulates transition to flowering. Forms a complex with GI on the CO promoter to regulate CO expression.; "flavin-binding, kelch repeat, f box 1" (FKF1); FUNCTIONS IN: ubiquitin-protein ligase activity, signal transducer activity; INVOLVED IN: response to blue light, positive regulation of flower development, circadian rhythm, ubiquitin-dependent protein catabolic process, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: whole plant, root tip, male gametophyte, leaf, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Kelch repeat type 2 (InterPro:IPR011498), F-box domain, Skp2-like (InterPro:IPR022364), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G57360.1); Has 8646 Blast hits to 5789 proteins in 832 species: Archae - 91; Bacteria - 2197; Metazoa - 2116; Fungi - 922; Plants - 2047; Viruses - 0; Other Eukaryotes - 1273 (source: NCBI BLink). & (q2r2w1|ado3_orysa : 825.0) Adagio-like protein 3 - Oryza sativa (Rice) & (gnl|cdd|35600 : 122.0) no description available & (reliability: 1804.0) & (original description: Putative ADO3, Description = Adagio protein 3, PFAM = PF00646;PF13415;PF13415;PF07646;PF13418)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00027842ctg003_13061-15798' '(at4g24210 : 85.9) F-box protein that is involved in GA signaling. Regulates seed germination. Component of E3 ubiquitin complex. Interacts with DELLA proteins.; SLEEPY1 (SLY1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G48170.1); Has 122 Blast hits to 122 proteins in 25 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 9; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative GID2, Description = F-box protein GID2, PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00029557ctg007_6330-9670' '(at4g08980 : 306.0) Encodes an F-box gene that is a novel negative regulator of AGO1 protein levels and may play a role in ABA signalling and/or response.; F-BOX WITH WD-40 2 (FBW2); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process, posttranscriptional regulation of gene expression; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT4G05460.1); Has 1165 Blast hits to 1048 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 539; Fungi - 16; Plants - 571; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 612.0) & (original description: Putative FBW2, Description = F-box protein FBW2, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00030225ctg000_461-10891' '(at5g02930 : 120.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT5G02910.1); Has 2185 Blast hits to 2152 proteins in 42 species: Archae - 0; Bacteria - 2; Metazoa - 16; Fungi - 0; Plants - 2164; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative , Description = , PFAM = PF00646;PF08387)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00030369ctg005_416-3396' '(at3g18150 : 107.0) RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT3G03360.1); Has 2180 Blast hits to 2140 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 2174; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00031247ctg002_2004-6666' '(at1g53320 : 417.0) Member of TLP family; tubby like protein 7 (TLP7); CONTAINS InterPro DOMAIN/s: Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 3 (TAIR:AT2G47900.2); Has 954 Blast hits to 946 proteins in 118 species: Archae - 0; Bacteria - 0; Metazoa - 352; Fungi - 19; Plants - 468; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37713 : 313.0) no description available & (gnl|cdd|85281 : 279.0) no description available & (reliability: 834.0) & (original description: Putative Os01g0674500, Description = Tubby-like F-box protein, PFAM = PF01167)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00031247ctg003_139-2531' '(at1g53320 : 92.4) Member of TLP family; tubby like protein 7 (TLP7); CONTAINS InterPro DOMAIN/s: Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 3 (TAIR:AT2G47900.2); Has 954 Blast hits to 946 proteins in 118 species: Archae - 0; Bacteria - 0; Metazoa - 352; Fungi - 19; Plants - 468; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37713 : 80.4) no description available & (reliability: 184.8) & (original description: Putative TULP2, Description = Tubby-like F-box protein, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00031331ctg012_10396-13505' '(at1g15670 : 333.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G80440.1); Has 1241 Blast hits to 1194 proteins in 125 species: Archae - 6; Bacteria - 99; Metazoa - 399; Fungi - 6; Plants - 685; Viruses - 3; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|39642 : 91.6) no description available & (reliability: 666.0) & (original description: Putative At1g15670, Description = F-box/kelch-repeat protein At1g15670, PFAM = PF01344;PF01344;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00033024ctg009_1-1676' '(at4g22030 : 116.0) CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G04480.1); Has 486 Blast hits to 359 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 482; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative PGSC0003DMG400016470, Description = F-box plant-like protein, putative, PFAM = PF14476)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00034600ctg008_1823-6752' '(at2g27210 : 444.0) BRI1 suppressor 1 (BSU1)-like 3 (BSL3); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, iron ion binding, phosphoprotein phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Metallophosphoesterase (InterPro:IPR004843), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 2 (TAIR:AT1G08420.2). & (q2qm47|bsl2_orysa : 417.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (reliability: 888.0) & (original description: Putative BSL1, Description = Serine/threonine-protein phosphatase, PFAM = PF07646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00034600ctg009_1-4877' '(at2g27210 : 721.0) BRI1 suppressor 1 (BSU1)-like 3 (BSL3); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, iron ion binding, phosphoprotein phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Metallophosphoesterase (InterPro:IPR004843), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 2 (TAIR:AT1G08420.2). & (q2qm47|bsl2_orysa : 715.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35595 : 348.0) no description available & (gnl|cdd|29063 : 295.0) no description available & (reliability: 1442.0) & (original description: Putative bimG, Description = Serine/threonine-protein phosphatase, PFAM = PF00149)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00039951ctg000_3829-7143' '(at4g12560 : 96.7) Encodes CPR30 (Constitutive Expresser of PR Genes 30), a F-Box protein that functions as a negative regulator of defense response.; CONSTITUTIVE EXPRESSER OF PR GENES 30 (CPR30); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: negative regulation of defense response; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box associated ubiquitination effector family protein (TAIR:AT4G22390.1); Has 1743 Blast hits to 1730 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1741; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative , Description = , PFAM = PF07734;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00049843ctg007_966-8315' '(at4g00755 : 282.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); Has 80 Blast hits to 80 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 11; Plants - 57; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 564.0) & (original description: Putative PGSC0003DMG400027774, Description = , PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben044scf00055351ctg001_1-1778' '(at5g49610 : 493.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G33530.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 986.0) & (original description: Putative At5g49610, Description = F-box protein At5g49610, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101ctg14375_1-2580' '(at5g07610 : 111.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G49610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101ctg14401_1-2620' '(at1g11620 : 89.4) F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box associated ubiquitination effector family protein (TAIR:AT1G31510.1); Has 2174 Blast hits to 2137 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2172; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative , Description = Putative ovule protein, PFAM = PF00646;PF08268)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101ctg14980_1619-3289' '(at4g22030 : 115.0) CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G04480.1); Has 486 Blast hits to 359 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 482; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative BnaA03g25450D, Description = F-box plant-like protein, putative, PFAM = PF14476)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00018_137089-140372' '(at1g76920 : 446.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Kelch repeat type 2 (InterPro:IPR011498); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G61590.2); Has 279 Blast hits to 279 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 279; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 892.0) & (original description: Putative SKIP15, Description = SKP1-interacting partner 15, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00022_633782-649364' '(at4g33210 : 1028.0) Encodes SLOMO (SLOW MOTION), a F-box protein required for auxin homeostasis and normal timing of lateral organ initiation at the shoot meristem.; SLOW MOTION (SLOMO); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT4G15475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39542 : 83.1) no description available & (reliability: 2056.0) & (original description: Putative FBL15, Description = F-box/LRR-repeat protein 15, PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00074_227839-231652' '(at1g08710 : 213.0) F-box family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; Has 110 Blast hits to 110 proteins in 39 species: Archae - 0; Bacteria - 4; Metazoa - 49; Fungi - 2; Plants - 38; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative SKIP24, Description = F-box protein SKIP24, PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00199_54269-66970' '(at3g52030 : 418.0) F-box family protein with WD40/YVTN repeat doamin; FUNCTIONS IN: molecular_function unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), F-box domain, Skp2-like (InterPro:IPR022364), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781). & (gnl|cdd|29257 : 85.8) no description available & (reliability: 836.0) & (original description: Putative At3g52030, Description = F-box/WD-40 repeat-containing protein At3g52030, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00212_164226-172533' '(at1g53320 : 513.0) Member of TLP family; tubby like protein 7 (TLP7); CONTAINS InterPro DOMAIN/s: Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 3 (TAIR:AT2G47900.2); Has 954 Blast hits to 946 proteins in 118 species: Archae - 0; Bacteria - 0; Metazoa - 352; Fungi - 19; Plants - 468; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|37713 : 390.0) no description available & (gnl|cdd|85281 : 283.0) no description available & (reliability: 1026.0) & (original description: Putative TULP7, Description = Tubby-like F-box protein 7, PFAM = PF01167;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00246_535844-539959' '(at2g47900 : 513.0) Member of TLP family; tubby like protein 3 (TLP3); FUNCTIONS IN: phosphoric diester hydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby-like protein 9 (TAIR:AT3G06380.1). & (gnl|cdd|37713 : 436.0) no description available & (gnl|cdd|85281 : 327.0) no description available & (reliability: 1026.0) & (original description: Putative TULP6, Description = Tubby-like F-box protein 6, PFAM = PF01167;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00305_178406-182297' '(at2g18280 : 483.0) Member of TLP family; tubby like protein 2 (TLP2); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 3 (TAIR:AT2G47900.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37713 : 410.0) no description available & (gnl|cdd|85281 : 292.0) no description available & (reliability: 880.0) & (original description: Putative TULP5, Description = Tubby-like F-box protein 5, PFAM = PF01167;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00369_2119143-2122034' '(at1g09155 : 218.0) phloem protein 2-B15 (PP2-B15); FUNCTIONS IN: carbohydrate binding; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: phloem protein 2-B13 (TAIR:AT1G56240.1); Has 535 Blast hits to 526 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 535; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 400.0) & (original description: Putative VBF, Description = AtPP2-B10, PFAM = PF12937;PF14299)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00397_312249-316597' '(at5g07670 : 439.0) RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT5G51380.1); Has 3082 Blast hits to 1820 proteins in 183 species: Archae - 0; Bacteria - 20; Metazoa - 1308; Fungi - 229; Plants - 1264; Viruses - 0; Other Eukaryotes - 261 (source: NCBI BLink). & (gnl|cdd|37158 : 86.3) no description available & (reliability: 878.0) & (original description: Putative RCOM_1500690, Description = Ubiquitin-protein ligase, putative, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00447_123917-127131' '(at3g61590 : 550.0) HAWAIIAN SKIRT (HWS); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: organ development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G15710.1). & (reliability: 1100.0) & (original description: Putative At3g61590, Description = F-box/kelch-repeat protein At3g61590, PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00471_150484-153653' '(at3g23880 : 80.5) F-box and associated interaction domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G06240.1); Has 2315 Blast hits to 2300 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2313; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative , Description = , PFAM = PF08268)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00509_486482-489681' '(at5g60570 : 557.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G26930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39642 : 108.0) no description available & (reliability: 1114.0) & (original description: Putative At5g60570, Description = F-box/kelch-repeat protein At5g60570, PFAM = PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00571_462314-468361' '(at1g55270 : 700.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G67480.2); Has 9614 Blast hits to 5501 proteins in 487 species: Archae - 10; Bacteria - 408; Metazoa - 7370; Fungi - 10; Plants - 1320; Viruses - 170; Other Eukaryotes - 326 (source: NCBI BLink). & (gnl|cdd|39642 : 142.0) no description available & (reliability: 1400.0) & (original description: Putative At1g55270, Description = F-box/kelch-repeat protein At1g55270, PFAM = PF01344;PF01344;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00592_39293-43037' '(at2g18280 : 461.0) Member of TLP family; tubby like protein 2 (TLP2); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 3 (TAIR:AT2G47900.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37713 : 410.0) no description available & (gnl|cdd|85281 : 284.0) no description available & (reliability: 838.0) & (original description: Putative TULP5, Description = Tubby-like F-box protein 5, PFAM = PF00646;PF01167)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00625_103011-109231' '(at4g03030 : 475.0) Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G63220.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39642 : 90.8) no description available & (reliability: 950.0) & (original description: Putative OR23, Description = F-box/kelch-repeat protein OR23, PFAM = PF01344;PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00637_351189-355854' '(at5g07610 : 115.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G49610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00646_657889-662664' '(at1g76900 : 583.0) Member of TLP family; tubby like protein 1 (TLP1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 10 (TAIR:AT1G25280.1); Has 1520 Blast hits to 1117 proteins in 153 species: Archae - 0; Bacteria - 107; Metazoa - 432; Fungi - 112; Plants - 488; Viruses - 57; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|37713 : 450.0) no description available & (gnl|cdd|85281 : 348.0) no description available & (reliability: 1140.0) & (original description: Putative TULP8, Description = Tubby-like F-box protein 8, PFAM = PF01167;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00663_539440-542690' '(at3g27150 : 371.0) Target gene of MIR2111-5p.; Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G40680.1); Has 8386 Blast hits to 4773 proteins in 282 species: Archae - 6; Bacteria - 402; Metazoa - 6487; Fungi - 23; Plants - 1074; Viruses - 50; Other Eukaryotes - 344 (source: NCBI BLink). & (gnl|cdd|39642 : 102.0) no description available & (reliability: 742.0) & (original description: Putative At3g27150, Description = F-box/kelch-repeat protein At3g27150, PFAM = PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00712_837224-841037' '(at5g42350 : 660.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G42360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1320.0) & (original description: Putative At5g42350, Description = F-box/kelch-repeat protein At5g42350, PFAM = PF01344;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00723_24930-28032' '(at4g08980 : 307.0) Encodes an F-box gene that is a novel negative regulator of AGO1 protein levels and may play a role in ABA signalling and/or response.; F-BOX WITH WD-40 2 (FBW2); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process, posttranscriptional regulation of gene expression; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT4G05460.1); Has 1165 Blast hits to 1048 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 539; Fungi - 16; Plants - 571; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 614.0) & (original description: Putative FBW2, Description = F-box protein FBW2, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00724_4604-8931' '(at1g23390 : 295.0) Kelch repeat-containing F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G24760.1); Has 146 Blast hits to 146 proteins in 15 species: Archae - 0; Bacteria - 1; Metazoa - 1; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 590.0) & (original description: Putative At1g23390, Description = F-box/kelch-repeat protein At1g23390, PFAM = PF13964;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00783_269820-272937' '(at4g08980 : 306.0) Encodes an F-box gene that is a novel negative regulator of AGO1 protein levels and may play a role in ABA signalling and/or response.; F-BOX WITH WD-40 2 (FBW2); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process, posttranscriptional regulation of gene expression; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT4G05460.1); Has 1165 Blast hits to 1048 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 539; Fungi - 16; Plants - 571; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 612.0) & (original description: Putative FBW2, Description = F-box protein FBW2, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00801_521323-525251' '(at2g26850 : 364.0) F-box family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G32560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 728.0) & (original description: Putative BnaC05g09840D, Description = BnaC05g09840D protein, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00812_184568-188734' '(at4g00755 : 308.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); Has 80 Blast hits to 80 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 11; Plants - 57; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 616.0) & (original description: Putative PGSC0003DMG400027774, Description = , PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00820_766746-770312' '(at4g08980 : 301.0) Encodes an F-box gene that is a novel negative regulator of AGO1 protein levels and may play a role in ABA signalling and/or response.; F-BOX WITH WD-40 2 (FBW2); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process, posttranscriptional regulation of gene expression; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT4G05460.1); Has 1165 Blast hits to 1048 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 539; Fungi - 16; Plants - 571; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 602.0) & (original description: Putative Sb04g027350, Description = Putative uncharacterized protein Sb04g027350, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00851_358959-377812' '(at2g27210 : 1542.0) BRI1 suppressor 1 (BSU1)-like 3 (BSL3); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, iron ion binding, phosphoprotein phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Metallophosphoesterase (InterPro:IPR004843), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 2 (TAIR:AT1G08420.2). & (q2qm47|bsl2_orysa : 1478.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35595 : 371.0) no description available & (gnl|cdd|47495 : 312.0) no description available & (reliability: 3084.0) & (original description: Putative bimG, Description = Serine/threonine-protein phosphatase, PFAM = PF07646;PF13418;PF13418;PF00149)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00885_582295-585449' '(at5g46170 : 470.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G18380.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 940.0) & (original description: Putative At5g46170, Description = F-box protein At5g46170, PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00890_91631-95717' '(at2g02360 : 224.0) phloem protein 2-B10 (PP2-B10); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G02240.1); Has 572 Blast hits to 558 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 567; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative PP2B6, Description = Putative F-box protein PP2-B6, PFAM = PF00646;PF14299)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00906_41247-44864' '(at1g67190 : 530.0) F-box/RNI-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT1G10780.1). & (reliability: 1060.0) & (original description: Putative At1g67190, Description = F-box/LRR-repeat protein At1g67190, PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00917_355547-359160' '(at1g47056 : 588.0) Encodes an F-box protein. Based on genetic analysis appears to be functionally redundant with VFB2,3, and 4. When expression of all 4 genes is reduced plants show defects in growth and reduced expression of auxin response genes.; VIER F-box proteine 1 (VFB1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: stomatal complex, sepal, root, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: VIER F-box proteine 3 (TAIR:AT4G07400.1); Has 4631 Blast hits to 2722 proteins in 229 species: Archae - 0; Bacteria - 68; Metazoa - 1574; Fungi - 394; Plants - 2158; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|37158 : 125.0) no description available & (reliability: 1176.0) & (original description: Putative At1g47056, Description = F-box protein At1g47056, PFAM = PF12937;PF13516;PF13516)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00927_11222-19669' '(at1g68050 : 986.0) Encodes FKF1, a flavin-binding kelch repeat F box protein, is clock-controlled, regulates transition to flowering. Forms a complex with GI on the CO promoter to regulate CO expression.; "flavin-binding, kelch repeat, f box 1" (FKF1); FUNCTIONS IN: ubiquitin-protein ligase activity, signal transducer activity; INVOLVED IN: response to blue light, positive regulation of flower development, circadian rhythm, ubiquitin-dependent protein catabolic process, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: whole plant, root tip, male gametophyte, leaf, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Kelch repeat type 2 (InterPro:IPR011498), F-box domain, Skp2-like (InterPro:IPR022364), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G57360.1); Has 8646 Blast hits to 5789 proteins in 832 species: Archae - 91; Bacteria - 2197; Metazoa - 2116; Fungi - 922; Plants - 2047; Viruses - 0; Other Eukaryotes - 1273 (source: NCBI BLink). & (q2r2w1|ado3_orysa : 892.0) Adagio-like protein 3 - Oryza sativa (Rice) & (gnl|cdd|35600 : 124.0) no description available & (reliability: 1972.0) & (original description: Putative ADO3, Description = Adagio protein 3, PFAM = PF00646;PF07646;PF13426;PF13415;PF13415;PF13418)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf00996_33777-37032' '(at3g07870 : 89.4) F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT3G23880.1); Has 2008 Blast hits to 1989 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2006; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01001_749741-753765' '(at4g18380 : 197.0) F-box family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G46170.1). & (reliability: 394.0) & (original description: Putative)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01022_32400-36377' '(at5g49610 : 491.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G33530.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 982.0) & (original description: Putative At5g49610, Description = F-box protein At5g49610, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01068_169889-173551' '(at2g42620 : 801.0) The mutations at MAX2 cause increased hypocotyl and petiole elongation in light-grown seedlings. Positional cloning identifies MAX2 as a member of the F-box leucine-rich repeat family of proteins. MAX2 is identical to ORE9, a proposed regulator of leaf senescence. Involved in positive regulation of light responses.; MORE AXILLARY BRANCHES 2 (MAX2); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT4G15475.1); Has 1122 Blast hits to 776 proteins in 97 species: Archae - 0; Bacteria - 2; Metazoa - 391; Fungi - 21; Plants - 636; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (q5vmp0|max2_orysa : 588.0) F-box/LRR-repeat MAX2 homolog (F-box and leucine-rich repeat MAX2 homolog) - Oryza sativa (Rice) & (reliability: 1602.0) & (original description: Putative MAX2A, Description = F-box/LRR-repeat MAX2 homolog A, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01082_177282-198807' '(at2g44900 : 1232.0) ARABIDILLO-1 and its homolog, ARABIDILLO -2, are unique among Arabidopsis Arm-repeat proteins in having an F-box motif and fall into a phylogenetically distinct subgroup from other plant Arm-repeat proteins Similar to arm repeat protein in rice and armadillo/beta-catenin repeat family protein / F-box family protein in Dictyostelium. ARABIDILLO-1 promote lateral root development. Mutant plants form fewer lateral roots, while ARABIDILLO-1-overexpressing lines produce more lateral roots than wild-type seedlings.; ARABIDILLO-1 (ARABIDILLO-1); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: lateral root development; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARABIDILLO-2 (TAIR:AT3G60350.1); Has 10074 Blast hits to 5287 proteins in 284 species: Archae - 0; Bacteria - 24; Metazoa - 4121; Fungi - 736; Plants - 4117; Viruses - 0; Other Eukaryotes - 1076 (source: NCBI BLink). & (gnl|cdd|39425 : 107.0) no description available & (reliability: 2464.0) & (original description: Putative FBX5, Description = Protein ARABIDILLO 1, PFAM = PF12937;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514;PF00514)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01150_68719-74285' '(at1g13570 : 124.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G56370.2); Has 1866 Blast hits to 1838 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1866; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01150_71157-74216' '(at1g13570 : 105.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G56370.2); Has 1866 Blast hits to 1838 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1866; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01166_901503-915719' '(at1g21760 : 529.0) This gene is predicted to encode an F-box protein that is evolutionarily conserved between Arabidopsis and other eukaryotes including S.cerevisiae and humans. It may play a role in regulating translation under conditions of temperature stress. FBP7 transcript levels are increased at high and low temperatures.; F-box protein 7 (FBP7); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); Has 471 Blast hits to 471 proteins in 160 species: Archae - 0; Bacteria - 0; Metazoa - 249; Fungi - 132; Plants - 70; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|38207 : 295.0) no description available & (reliability: 1058.0) & (original description: Putative SKIP32, Description = F-box protein 7, PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01192_71452-74925' '(at1g13570 : 221.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G56370.2); Has 1866 Blast hits to 1838 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1866; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative , Description = , PFAM = PF08387;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01192_786652-790388' '(gnl|cdd|39642 : 130.0) no description available & (at1g16250 : 94.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G63220.2); Has 9062 Blast hits to 5094 proteins in 277 species: Archae - 4; Bacteria - 620; Metazoa - 6949; Fungi - 23; Plants - 1110; Viruses - 34; Other Eukaryotes - 322 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative Sb04g036460, Description = Putative uncharacterized protein Sb04g036460, PFAM = PF01344;PF01344;PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01220_60992-91117' '(at3g24760 : 110.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Kelch repeat-containing F-box family protein (TAIR:AT1G23390.1); Has 250 Blast hits to 250 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 245; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative At3g24760, Description = F-box/kelch-repeat protein At3g24760, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01220_88332-91471' '(at3g24760 : 331.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Kelch repeat-containing F-box family protein (TAIR:AT1G23390.1); Has 250 Blast hits to 250 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 245; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 662.0) & (original description: Putative At3g24760, Description = F-box/kelch-repeat protein At3g24760, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01226_138560-148168' '(at5g63520 : 313.0) CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364), FIST C domain (InterPro:IPR019494), FIST domain, N-terminal (InterPro:IPR013702); Has 137 Blast hits to 137 proteins in 56 species: Archae - 0; Bacteria - 88; Metazoa - 6; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 626.0) & (original description: Putative At5g63520, Description = F-box/LRR-repeat protein At5g63520, PFAM = PF08495;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01227_123996-131591' '(at2g39940 : 811.0) Encodes a protein containing Leu-rich repeats and a degenerate F-box motif. Associates with AtCUL1, AtRbx1, and the Skp1-like proteins ASK1 and ASK2 to assemble SCF COI1 ubiquitin-ligase complexes in planta. A single amino acid substitution in the F-box motif of COI1 abolishes the formation of the SCF(COI1) complexes and results in loss of the JA response. Required for wound- and jasmonates-induced transcriptional regulation.; CORONATINE INSENSITIVE 1 (COI1); BEST Arabidopsis thaliana protein match is: GRR1-like protein 1 (TAIR:AT4G03190.1); Has 1742 Blast hits to 1380 proteins in 128 species: Archae - 0; Bacteria - 2; Metazoa - 463; Fungi - 47; Plants - 1165; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|37158 : 118.0) no description available & (reliability: 1622.0) & (original description: Putative COI1, Description = Coronatine-insensitive protein 1, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01230_52528-55891' '(at3g06240 : 101.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT4G12560.2); Has 2015 Blast hits to 1993 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2013; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01233_136074-142004' '(at2g25490 : 621.0) Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3.; EIN3-binding F box protein 1 (EBF1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: EIN3-binding F box protein 2 (TAIR:AT5G25350.1); Has 13069 Blast hits to 4728 proteins in 296 species: Archae - 0; Bacteria - 528; Metazoa - 5097; Fungi - 1628; Plants - 4199; Viruses - 9; Other Eukaryotes - 1608 (source: NCBI BLink). & (gnl|cdd|39542 : 112.0) no description available & (reliability: 1242.0) & (original description: Putative EBF1, Description = EIN3-binding F-box protein 1, PFAM = PF13516;PF13516;PF13516;PF13516;PF13516)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01237_1082841-1086037' '(at5g07610 : 198.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G49610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative PGSC0003DMG400007218, Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01273_133596-139078' '(at1g67480 : 441.0) Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G27420.1); Has 11510 Blast hits to 6062 proteins in 581 species: Archae - 21; Bacteria - 896; Metazoa - 8265; Fungi - 112; Plants - 1475; Viruses - 165; Other Eukaryotes - 576 (source: NCBI BLink). & (gnl|cdd|39642 : 141.0) no description available & (reliability: 882.0) & (original description: Putative At1g67480, Description = F-box/kelch-repeat protein At1g67480, PFAM = PF01344;PF01344;PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01375_244709-253129' '(at5g52880 : 196.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative , Description = F-box-like protein, PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01383_672151-675821' '(at5g21040 : 625.0) Encodes an F-box containing protein that interacts physically with BHLH32 and appears to be involved in mediating phosphate starvation responses.; F-box protein 2 (FBX2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cellular response to phosphate starvation; LOCATED IN: SCF ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), F-box domain, cyclin-like (InterPro:IPR001810), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), F-box domain, Skp2-like (InterPro:IPR022364), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1). & (gnl|cdd|29257 : 121.0) no description available & (gnl|cdd|35495 : 92.0) no description available & (reliability: 1250.0) & (original description: Putative At5g21040, Description = F-box/WD-40 repeat-containing protein At5g21040, PFAM = PF00646;PF00400;PF00400)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01386_53975-57078' '(at3g06240 : 183.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT4G12560.2); Has 2015 Blast hits to 1993 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2013; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative , Description = , PFAM = PF00646;PF07734)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01411_146358-149680' '(at1g74510 : 516.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT2G02870.3); Has 7938 Blast hits to 4441 proteins in 274 species: Archae - 4; Bacteria - 392; Metazoa - 6058; Fungi - 35; Plants - 1067; Viruses - 39; Other Eukaryotes - 343 (source: NCBI BLink). & (gnl|cdd|39642 : 92.4) no description available & (reliability: 1032.0) & (original description: Putative At1g74510, Description = F-box/kelch-repeat protein At1g74510, PFAM = PF01344;PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01423_601575-606326' '(at1g13570 : 135.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G56370.2); Has 1866 Blast hits to 1838 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1866; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01432_633392-638025' '(at5g67140 : 313.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT1G21410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 626.0) & (original description: Putative RCOM_1410170, Description = Ubiquitin-protein ligase, putative, PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01434_208960-212280' '(at1g55000 : 293.0) peptidoglycan-binding LysM domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), F-box domain, Skp2-like (InterPro:IPR022364), Peptidoglycan-binding Lysin subgroup (InterPro:IPR002482); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38061 : 101.0) no description available & (reliability: 586.0) & (original description: Putative At1g55000, Description = F-box protein At1g55000, PFAM = PF01476;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01450_107442-129345' '(at1g78280 : 1148.0) transferases, transferring glycosyl groups; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Transcription factor jumonji (InterPro:IPR013129), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06550.1); Has 1510 Blast hits to 1497 proteins in 307 species: Archae - 0; Bacteria - 312; Metazoa - 658; Fungi - 137; Plants - 199; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink). & (gnl|cdd|37341 : 422.0) no description available & (reliability: 2296.0) & (original description: Putative psr, Description = Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6, PFAM = PF00646;PF13621)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01481_114100-117265' '(at5g07610 : 102.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G49610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01481_114109-117329' '(at5g07610 : 150.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G49610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01529_371526-378132' '(at3g62980 : 663.0) Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation.; TRANSPORT INHIBITOR RESPONSE 1 (TIR1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: GRR1-like protein 1 (TAIR:AT4G03190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37158 : 157.0) no description available & (reliability: 1210.0) & (original description: Putative At5g49980, Description = Transport inhibitor response 1-like protein, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01545_277743-280993' '(at4g33160 : 327.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G27340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 654.0) & (original description: Putative FBX13, Description = F-box only protein 13, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01580_166897-206519' '(at2g17030 : 144.0) CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT2G17036.1); Has 414 Blast hits to 409 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 414; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative RCOM_1599830, Description = Ubiquitin-protein ligase, putative, PFAM = PF03478)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01718_933336-940210' '(at2g17020 : 650.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT1G55590.1); Has 4669 Blast hits to 2409 proteins in 221 species: Archae - 0; Bacteria - 377; Metazoa - 1922; Fungi - 539; Plants - 1335; Viruses - 3; Other Eukaryotes - 493 (source: NCBI BLink). & (reliability: 1300.0) & (original description: Putative FBL10, Description = F-box/LRR-repeat protein 10, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01750_317215-641614' '(at2g27210 : 1584.0) BRI1 suppressor 1 (BSU1)-like 3 (BSL3); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, iron ion binding, phosphoprotein phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Metallophosphoesterase (InterPro:IPR004843), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 2 (TAIR:AT1G08420.2). & (q2qm47|bsl2_orysa : 1522.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|35595 : 368.0) no description available & (gnl|cdd|47495 : 311.0) no description available & (reliability: 3168.0) & (original description: Putative BSL3, Description = Serine/threonine-protein phosphatase BSL3, PFAM = PF13418;PF13418;PF00149;PF07646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01757_191645-195722' '(at1g13570 : 148.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G56370.2); Has 1866 Blast hits to 1838 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1866; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative , Description = , PFAM = PF08387;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01788_78863-82306' '(at1g13570 : 184.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G56370.2); Has 1866 Blast hits to 1838 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1866; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative PGSC0003DMG404013246, Description = Putative F-box/FBD/LRR-repeat protein-like, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01788_118662-122136' '(at1g13570 : 149.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G56370.2); Has 1866 Blast hits to 1838 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1866; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative PGSC0003DMG404013246, Description = Putative F-box/FBD/LRR-repeat protein-like, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01848_287984-298409' '(at2g02240 : 262.0) maternal effect embryo arrest 66 (MEE66); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B2 (TAIR:AT2G02250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative At2g02240, Description = F-box protein At2g02240, PFAM = PF14299)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01876_179520-182554' '(at3g63220 : 502.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Kelch repeat type 1 (InterPro:IPR006652), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G16250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39642 : 109.0) no description available & (reliability: 1004.0) & (original description: Putative SKIP30, Description = Kelch repeat-containing F-box family protein, PFAM = PF01344;PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01886_145126-148169' '(at4g04480 : 253.0) unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: flower, pollen tube; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT4G22030.1); Has 78 Blast hits to 78 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative At4g22030, Description = F-box plant-like protein, putative, PFAM = PF14476)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01922_376421-379617' '(at3g23880 : 133.0) F-box and associated interaction domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G06240.1); Has 2315 Blast hits to 2300 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2313; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01968_91152-107493' '(at3g61350 : 329.0) Encodes an SKP1 interacting partner (SKIP4).; SKP1 interacting partner 4 (SKIP4); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G55270.1); Has 3566 Blast hits to 2975 proteins in 175 species: Archae - 6; Bacteria - 195; Metazoa - 2199; Fungi - 2; Plants - 1060; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|39642 : 87.4) no description available & (reliability: 658.0) & (original description: Putative SKIP4, Description = F-box/kelch-repeat protein SKIP4, PFAM = PF00646;PF01344;PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01972_288006-291040' '(at3g63220 : 506.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Kelch repeat type 1 (InterPro:IPR006652), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G16250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39642 : 122.0) no description available & (reliability: 1012.0) & (original description: Putative SKIP30, Description = F-box/kelch-repeat protein SKIP30, PFAM = PF01344;PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf01987_34549-37757' '(at3g07870 : 293.0) F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT3G23880.1); Has 2008 Blast hits to 1989 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2006; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 586.0) & (original description: Putative At3g07870, Description = F-box protein At3g07870, PFAM = PF07734;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf02006_327759-333850' '(at1g55270 : 726.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G67480.2); Has 9614 Blast hits to 5501 proteins in 487 species: Archae - 10; Bacteria - 408; Metazoa - 7370; Fungi - 10; Plants - 1320; Viruses - 170; Other Eukaryotes - 326 (source: NCBI BLink). & (gnl|cdd|39642 : 136.0) no description available & (reliability: 1452.0) & (original description: Putative At1g55270, Description = F-box/kelch-repeat protein At1g55270, PFAM = PF00646;PF01344;PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf02080_399960-403461' '(at1g13570 : 182.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G56370.2); Has 1866 Blast hits to 1838 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1866; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative , Description = Putative F-box/FBD/LRR-repeat protein-like, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf02112_263632-268406' '(at2g25490 : 586.0) Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3.; EIN3-binding F box protein 1 (EBF1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: EIN3-binding F box protein 2 (TAIR:AT5G25350.1); Has 13069 Blast hits to 4728 proteins in 296 species: Archae - 0; Bacteria - 528; Metazoa - 5097; Fungi - 1628; Plants - 4199; Viruses - 9; Other Eukaryotes - 1608 (source: NCBI BLink). & (gnl|cdd|37158 : 130.0) no description available & (reliability: 1172.0) & (original description: Putative EBF1, Description = EIN3-binding F box protein 1, PFAM = PF00646;PF13516;PF13516;PF13516;PF13516;PF13516)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf02128_16551-19966' '(at1g22040 : 558.0) Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G55270.1); Has 10813 Blast hits to 5578 proteins in 328 species: Archae - 18; Bacteria - 659; Metazoa - 8206; Fungi - 35; Plants - 1449; Viruses - 72; Other Eukaryotes - 374 (source: NCBI BLink). & (gnl|cdd|39642 : 121.0) no description available & (reliability: 1116.0) & (original description: Putative At1g22040, Description = F-box/kelch-repeat protein At1g22040, PFAM = PF12937;PF01344;PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf02153_47156-50286' '(at5g43190 : 263.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 2 (InterPro:IPR011498), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G27340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative At5g43190, Description = F-box/kelch-repeat protein At5g43190, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf02207_419641-424464' '(at1g23780 : 183.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G23770.1); Has 310 Blast hits to 310 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 0; Plants - 156; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf02280_797206-804709' '(at2g39940 : 808.0) Encodes a protein containing Leu-rich repeats and a degenerate F-box motif. Associates with AtCUL1, AtRbx1, and the Skp1-like proteins ASK1 and ASK2 to assemble SCF COI1 ubiquitin-ligase complexes in planta. A single amino acid substitution in the F-box motif of COI1 abolishes the formation of the SCF(COI1) complexes and results in loss of the JA response. Required for wound- and jasmonates-induced transcriptional regulation.; CORONATINE INSENSITIVE 1 (COI1); BEST Arabidopsis thaliana protein match is: GRR1-like protein 1 (TAIR:AT4G03190.1); Has 1742 Blast hits to 1380 proteins in 128 species: Archae - 0; Bacteria - 2; Metazoa - 463; Fungi - 47; Plants - 1165; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|37158 : 120.0) no description available & (reliability: 1616.0) & (original description: Putative COI1, Description = Coronatine-insensitive protein 1, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf02291_135948-139150' '(at2g40910 : 89.0) F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G40920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative , Description = , PFAM = PF00646;PF07734)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf02298_695725-698465' '(at4g21510 : 107.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G05010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf02321_35873-38582' '(at4g12560 : 95.1) Encodes CPR30 (Constitutive Expresser of PR Genes 30), a F-Box protein that functions as a negative regulator of defense response.; CONSTITUTIVE EXPRESSER OF PR GENES 30 (CPR30); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: negative regulation of defense response; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box associated ubiquitination effector family protein (TAIR:AT4G22390.1); Has 1743 Blast hits to 1730 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1741; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative , Description = , PFAM = PF07734)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf02325_379305-382926' '(at1g31350 : 297.0) KAR-UP F-box 1 (KUF1); CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G55270.1); Has 661 Blast hits to 661 proteins in 63 species: Archae - 0; Bacteria - 29; Metazoa - 81; Fungi - 0; Plants - 548; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 594.0) & (original description: Putative SKIP25, Description = F-box family protein, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf02425_434323-437546' '(at1g64295 : 112.0) F-box associated ubiquitination effector family protein; CONTAINS InterPro DOMAIN/s: F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box protein-related (TAIR:AT1G64290.1); Has 53 Blast hits to 53 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative PGSC0003DMG400046351, Description = , PFAM = PF08268)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf02510_215110-218886' '(at1g67190 : 568.0) F-box/RNI-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT1G10780.1). & (reliability: 1136.0) & (original description: Putative At1g67190, Description = F-box/LRR-repeat protein At1g67190, PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf02547_23373-26566' '(at2g36090 : 253.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G27310.1); Has 123 Blast hits to 123 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 123; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative BnaA05g08180D, Description = BnaA05g08180D protein, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf02606_569712-575492' '(at2g02240 : 258.0) maternal effect embryo arrest 66 (MEE66); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B2 (TAIR:AT2G02250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative At2g02240, Description = F-box protein At2g02240, PFAM = PF14299)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf02626_481514-484722' '(at3g23880 : 147.0) F-box and associated interaction domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G06240.1); Has 2315 Blast hits to 2300 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2313; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative POPTR_0008s20430g, Description = F-box family protein, PFAM = PF00646;PF07734)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf02626_660030-663154' '(at3g06240 : 137.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT4G12560.2); Has 2015 Blast hits to 1993 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2013; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf02639_117658-121140' '(at1g13570 : 124.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G56370.2); Has 1866 Blast hits to 1838 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1866; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative , Description = , PFAM = PF08387)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf02639_172647-176138' '(at1g13570 : 146.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G56370.2); Has 1866 Blast hits to 1838 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1866; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative , Description = , PFAM = PF08387)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf02647_97758-100285' '(at5g48170 : 102.0) encodes an F-box protein whose protein sequence is similar to SLY1, which belongs to SCF-SLY1 E3 ligase complex. SCF-SLY1 E3 ligase degrades DELLA proteins that are involved in promoting growth. Overexpression of SLY2 can partially compensate sly1-10 mutant phenotype of dwarfism.; SLEEPY2 (SLY2); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G24210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative Sb01g044060, Description = Putative uncharacterized protein Sb01g044060, PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf02902_40106-43347' '(at5g07610 : 207.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G49610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf02917_106326-109582' '(at1g67190 : 550.0) F-box/RNI-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT1G10780.1). & (reliability: 1100.0) & (original description: Putative Ccrd_009570, Description = F-box domain, cyclin-like protein, PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf02937_526214-532438' '(at1g70590 : 383.0) F-box family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein (TAIR:AT1G18260.1); Has 16059 Blast hits to 6577 proteins in 1289 species: Archae - 0; Bacteria - 11525; Metazoa - 502; Fungi - 723; Plants - 391; Viruses - 15; Other Eukaryotes - 2903 (source: NCBI BLink). & (gnl|cdd|36763 : 107.0) no description available & (gnl|cdd|31133 : 90.1) no description available & (reliability: 766.0) & (original description: Putative At1g70590, Description = F-box protein At1g70590, PFAM = PF08238;PF08238;PF08238;PF08238;PF08238;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf02989_99739-104143' '(at3g18150 : 139.0) RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT3G03360.1); Has 2180 Blast hits to 2140 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 2174; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf02989_130482-139749' '(at5g02930 : 103.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT5G02910.1); Has 2185 Blast hits to 2152 proteins in 42 species: Archae - 0; Bacteria - 2; Metazoa - 16; Fungi - 0; Plants - 2164; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf03000_40619-43986' '(at3g06240 : 83.2) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT4G12560.2); Has 2015 Blast hits to 1993 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2013; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative , Description = , PFAM = PF07734;PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf03039_183688-188649' '(at1g51550 : 474.0) Kelch repeat-containing F-box family protein; FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: LOV KELCH protein 2 (TAIR:AT2G18915.1); Has 5347 Blast hits to 2769 proteins in 302 species: Archae - 18; Bacteria - 180; Metazoa - 1718; Fungi - 754; Plants - 1496; Viruses - 0; Other Eukaryotes - 1181 (source: NCBI BLink). & (gnl|cdd|35600 : 153.0) no description available & (q5z8k3|ado1_orysa : 104.0) Adagio-like protein 1 - Oryza sativa (Rice) & (reliability: 948.0) & (original description: Putative At1g51550, Description = F-box/kelch-repeat protein At1g51550, PFAM = PF00646;PF13418;PF13418)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf03116_29679-32428' '(at5g39250 : 343.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); Has 68 Blast hits to 68 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 686.0) & (original description: Putative , Description = , PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf03164_764584-767690' '(at4g12560 : 119.0) Encodes CPR30 (Constitutive Expresser of PR Genes 30), a F-Box protein that functions as a negative regulator of defense response.; CONSTITUTIVE EXPRESSER OF PR GENES 30 (CPR30); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: negative regulation of defense response; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box associated ubiquitination effector family protein (TAIR:AT4G22390.1); Has 1743 Blast hits to 1730 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1741; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative , Description = , PFAM = PF07734)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf03164_764592-768020' '(at4g12560 : 110.0) Encodes CPR30 (Constitutive Expresser of PR Genes 30), a F-Box protein that functions as a negative regulator of defense response.; CONSTITUTIVE EXPRESSER OF PR GENES 30 (CPR30); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: negative regulation of defense response; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box associated ubiquitination effector family protein (TAIR:AT4G22390.1); Has 1743 Blast hits to 1730 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1741; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf03284_536640-539872' '(at5g07610 : 116.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G49610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf03405_246809-250358' '(at4g02440 : 370.0) EID1 is an F-box protein that functions as a negative regulator in phytochrome A (phyA)-specific light signalling. Expressed at all stages of plant development independently of light conditions, localizes to the nucleus, and forms nuclear speckles under continuous far-red light. Forms stable dimeric and trimeric complexes with several ASK proteins and Cullin1 in yeast and in planta.; EMPFINDLICHER IM DUNKELROTEN LICHT 1 (EID1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: photoperiodism, flowering, red, far-red light phototransduction, leaf development, regulation of photomorphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 91 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 740.0) & (original description: Putative EID1, Description = Phytochrome A-associated F-box protein, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf03449_324442-328620' '(at3g12350 : 375.0) F-box family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364). & (reliability: 750.0) & (original description: Putative , Description = , PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf03450_203518-206702' '(at3g63220 : 457.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Kelch repeat type 1 (InterPro:IPR006652), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G16250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39642 : 98.9) no description available & (reliability: 914.0) & (original description: Putative SKIP30, Description = F-box/kelch-repeat protein SKIP30, PFAM = PF01344;PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf03500_106990-113094' '(at2g39940 : 776.0) Encodes a protein containing Leu-rich repeats and a degenerate F-box motif. Associates with AtCUL1, AtRbx1, and the Skp1-like proteins ASK1 and ASK2 to assemble SCF COI1 ubiquitin-ligase complexes in planta. A single amino acid substitution in the F-box motif of COI1 abolishes the formation of the SCF(COI1) complexes and results in loss of the JA response. Required for wound- and jasmonates-induced transcriptional regulation.; CORONATINE INSENSITIVE 1 (COI1); BEST Arabidopsis thaliana protein match is: GRR1-like protein 1 (TAIR:AT4G03190.1); Has 1742 Blast hits to 1380 proteins in 128 species: Archae - 0; Bacteria - 2; Metazoa - 463; Fungi - 47; Plants - 1165; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|37158 : 99.0) no description available & (reliability: 1552.0) & (original description: Putative COI1, Description = Coronatine-insensitive protein 1, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf03574_143790-148133' '(at4g12560 : 92.4) Encodes CPR30 (Constitutive Expresser of PR Genes 30), a F-Box protein that functions as a negative regulator of defense response.; CONSTITUTIVE EXPRESSER OF PR GENES 30 (CPR30); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: negative regulation of defense response; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box associated ubiquitination effector family protein (TAIR:AT4G22390.1); Has 1743 Blast hits to 1730 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1741; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative , Description = , PFAM = PF07734;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf03600_481818-488067' '(at3g26000 : 277.0) Ribonuclease inhibitor; BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT3G27290.1); Has 103 Blast hits to 103 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 22; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 554.0) & (original description: Putative , Description = , PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf03645_396398-409452' '(at5g07610 : 95.5) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G49610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 191.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf03645_441378-444593' '(at5g07610 : 118.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G49610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf03693_405923-409002' '(at5g49610 : 80.1) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G33530.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf03755_201752-206086' '(at1g13570 : 80.5) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G56370.2); Has 1866 Blast hits to 1838 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1866; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf03791_145225-149814' '(at3g18150 : 112.0) RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT3G03360.1); Has 2180 Blast hits to 2140 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 2174; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative PGSC0003DMG400027796, Description = Putative ovule protein, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf03810_189281-192399' '(at4g12560 : 116.0) Encodes CPR30 (Constitutive Expresser of PR Genes 30), a F-Box protein that functions as a negative regulator of defense response.; CONSTITUTIVE EXPRESSER OF PR GENES 30 (CPR30); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: negative regulation of defense response; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box associated ubiquitination effector family protein (TAIR:AT4G22390.1); Has 1743 Blast hits to 1730 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1741; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative , Description = , PFAM = PF00646;PF07734)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf03855_350481-354634' '(at2g47900 : 517.0) Member of TLP family; tubby like protein 3 (TLP3); FUNCTIONS IN: phosphoric diester hydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby-like protein 9 (TAIR:AT3G06380.1). & (gnl|cdd|37713 : 439.0) no description available & (gnl|cdd|85281 : 322.0) no description available & (reliability: 1034.0) & (original description: Putative TULP6, Description = Tubby-like F-box protein 6, PFAM = PF01167;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf03911_16545-24533' '(at1g27340 : 596.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G15710.1); Has 1110 Blast hits to 1104 proteins in 52 species: Archae - 0; Bacteria - 1; Metazoa - 2; Fungi - 0; Plants - 1106; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 1192.0) & (original description: Putative Os01g0923900, Description = Os01g0923900 protein, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf03971_243170-248641' '(at2g03530 : 536.0) Mediate high-affinity uracil and 5-FU (a toxic uracil analogue) transport when expressed in yeast and Xenopus oocytes.Involved in allantoin transport.; ureide permease 2 (UPS2); FUNCTIONS IN: uracil:cation symporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: ureide permease 1 (TAIR:AT2G03590.1); Has 297 Blast hits to 263 proteins in 72 species: Archae - 0; Bacteria - 145; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|70624 : 513.0) no description available & (q41706|upsa3_vigun : 487.0) Probable ureide permease A3 (VuA3) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 1072.0) & (original description: Putative UPS2, Description = Ureide permease 2, PFAM = PF07168)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf03979_629935-641738' '(at5g57360 : 961.0) Encodes clock-associated PAS protein ZTL; Also known as FKF1-like protein 2 or ADAGIO1(ADO1). A protein containing a PAS domain ZTL contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. ZTL is the F-box component of an SCF complex implicated in the degradation of TOC1.; ZEITLUPE (ZTL); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Kelch repeat type 1 (InterPro:IPR006652), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), PAS fold (InterPro:IPR013767), Kelch repeat type 2 (InterPro:IPR011498), PAS (InterPro:IPR000014), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: LOV KELCH protein 2 (TAIR:AT2G18915.2); Has 8358 Blast hits to 5610 proteins in 807 species: Archae - 89; Bacteria - 2025; Metazoa - 1889; Fungi - 901; Plants - 2129; Viruses - 0; Other Eukaryotes - 1325 (source: NCBI BLink). & (q5z8k3|ado1_orysa : 908.0) Adagio-like protein 1 - Oryza sativa (Rice) & (gnl|cdd|35600 : 122.0) no description available & (reliability: 1922.0) & (original description: Putative ADO1, Description = Adagio protein 1, PFAM = PF13418;PF07646;PF07646;PF12937;PF13426;PF13415)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf04113_1777583-1781384' '(at1g47270 : 368.0) Member of TLP family; tubby like protein 6 (TLP6); FUNCTIONS IN: phosphoric diester hydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 2 (TAIR:AT2G18280.2). & (gnl|cdd|37713 : 320.0) no description available & (gnl|cdd|85281 : 232.0) no description available & (reliability: 736.0) & (original description: Putative TULP1, Description = Tubby-like F-box protein, PFAM = PF00646;PF01167)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf04185_350440-358755' '(at3g54480 : 369.0) Encodes an SKP1 interacting partner (SKIP5).; SKP1/ASK-interacting protein 5 (SKIP5); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); Has 36 Blast hits to 36 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 738.0) & (original description: Putative SKIP5, Description = F-box protein SKIP5, PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf04252_68090-74740' '(at3g54650 : 556.0) FBL17; FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: generative cell mitosis, seed development, embryo development, ubiquitin-dependent protein catabolic process, pollen development; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); Has 1738 Blast hits to 1195 proteins in 149 species: Archae - 0; Bacteria - 27; Metazoa - 733; Fungi - 89; Plants - 663; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (reliability: 1112.0) & (original description: Putative FBL17, Description = F-box/LRR-repeat protein 17, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf04253_9950-16502' '(at1g47790 : 86.3) F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT1G50870.1); Has 2366 Blast hits to 2317 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2364; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative , Description = Putative ovule protein, PFAM = PF00646;PF08268)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf04329_533607-538938' '(at1g57790 : 287.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G56470.1); Has 543 Blast hits to 532 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 541; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 574.0) & (original description: Putative At1g57790, Description = F-box/kelch-repeat protein At1g57790, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf04387_242610-245779' '(at3g07550 : 387.0) RNI-like superfamily protein; BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT5G23340.1); Has 6516 Blast hits to 2862 proteins in 227 species: Archae - 0; Bacteria - 210; Metazoa - 2727; Fungi - 707; Plants - 2248; Viruses - 0; Other Eukaryotes - 624 (source: NCBI BLink). & (gnl|cdd|39542 : 93.1) no description available & (reliability: 774.0) & (original description: Putative FBL12, Description = F-box/LRR-repeat protein 12, PFAM = PF12937;PF13516;PF13516)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf04419_184718-188058' '(at4g08980 : 294.0) Encodes an F-box gene that is a novel negative regulator of AGO1 protein levels and may play a role in ABA signalling and/or response.; F-BOX WITH WD-40 2 (FBW2); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process, posttranscriptional regulation of gene expression; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT4G05460.1); Has 1165 Blast hits to 1048 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 539; Fungi - 16; Plants - 571; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 588.0) & (original description: Putative FBW2, Description = F-box protein FBW2, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf04430_178410-181900' '(at1g13570 : 425.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G56370.2); Has 1866 Blast hits to 1838 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1866; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 850.0) & (original description: Putative At1g13570, Description = F-box/FBD/LRR-repeat protein At1g13570, PFAM = PF00646;PF08387)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf05002_89086-112549' '(at2g02870 : 531.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G14330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39642 : 104.0) no description available & (reliability: 1062.0) & (original description: Putative SKIP11, Description = F-box/kelch-repeat protein SKIP11, PFAM = PF01344;PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf05002_109275-113215' '(at2g02870 : 543.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G14330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39642 : 108.0) no description available & (reliability: 1086.0) & (original description: Putative At1g26930, Description = F-box/kelch-repeat protein At1g26930, PFAM = PF01344;PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf05009_13846-17576' '(at1g74875 : 92.4) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G67623.1); Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative PGSC0003DMG400021580, Description = , PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf05135_14754-18403' '(at1g47056 : 582.0) Encodes an F-box protein. Based on genetic analysis appears to be functionally redundant with VFB2,3, and 4. When expression of all 4 genes is reduced plants show defects in growth and reduced expression of auxin response genes.; VIER F-box proteine 1 (VFB1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: stomatal complex, sepal, root, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: VIER F-box proteine 3 (TAIR:AT4G07400.1); Has 4631 Blast hits to 2722 proteins in 229 species: Archae - 0; Bacteria - 68; Metazoa - 1574; Fungi - 394; Plants - 2158; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|37158 : 124.0) no description available & (reliability: 1164.0) & (original description: Putative At1g47056, Description = F-box protein At1g47056, PFAM = PF13516;PF13516;PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf05143_26124-28815' '(at4g21510 : 102.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G05010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf05217_47821-61713' '(at3g54480 : 367.0) Encodes an SKP1 interacting partner (SKIP5).; SKP1/ASK-interacting protein 5 (SKIP5); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); Has 36 Blast hits to 36 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 734.0) & (original description: Putative SKIP5, Description = E3 ubiquitin-protein ligase, PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf05241_6428-12456' '(at1g55590 : 470.0) RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT2G17020.1); Has 6075 Blast hits to 3000 proteins in 237 species: Archae - 0; Bacteria - 329; Metazoa - 2581; Fungi - 596; Plants - 1820; Viruses - 3; Other Eukaryotes - 746 (source: NCBI BLink). & (reliability: 940.0) & (original description: Putative ATB, Description = F-box protein At-B, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf05310_35920-39960' '(at1g25280 : 593.0) Member of TLP family; tubby like protein 10 (TLP10); FUNCTIONS IN: phosphoric diester hydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 5 (TAIR:AT1G43640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37713 : 445.0) no description available & (gnl|cdd|85281 : 343.0) no description available & (reliability: 1128.0) & (original description: Putative TULP14, Description = Tubby-like F-box protein 14, PFAM = PF01167;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf05316_169265-174118' '(at2g02240 : 254.0) maternal effect embryo arrest 66 (MEE66); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B2 (TAIR:AT2G02250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 504.0) & (original description: Putative At2g02240, Description = F-box protein At2g02240, PFAM = PF14299)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf05396_273563-279058' '(at5g46170 : 462.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G18380.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 924.0) & (original description: Putative At5g46170, Description = F-box protein At5g46170, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf05416_38229-45915' '(at2g03530 : 545.0) Mediate high-affinity uracil and 5-FU (a toxic uracil analogue) transport when expressed in yeast and Xenopus oocytes.Involved in allantoin transport.; ureide permease 2 (UPS2); FUNCTIONS IN: uracil:cation symporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: ureide permease 1 (TAIR:AT2G03590.1); Has 297 Blast hits to 263 proteins in 72 species: Archae - 0; Bacteria - 145; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|70624 : 520.0) no description available & (q41706|upsa3_vigun : 471.0) Probable ureide permease A3 (VuA3) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 1090.0) & (original description: Putative UPS2, Description = Ureide permease 2, PFAM = PF07168)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf05422_66671-69798' '(at5g07610 : 127.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G49610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf05438_524775-528082' '(at4g22030 : 318.0) CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G04480.1); Has 486 Blast hits to 359 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 482; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative MTR_4g132390, Description = F-box plant-like protein, putative, PFAM = PF14476)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf05438_541549-544736' '(at4g22030 : 336.0) CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G04480.1); Has 486 Blast hits to 359 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 482; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 672.0) & (original description: Putative BnaA03g25450D, Description = BnaA03g25450D protein, PFAM = PF14476)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf05458_67503-72318' '(at5g57900 : 294.0) F-box protein, interacts with SKP1/ASK1 subunit of SCF ubiquitin ligase in a glucose-dependent manner; SKP1 interacting partner 1 (SKIP1); CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT4G30640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37158 : 87.1) no description available & (reliability: 566.0) & (original description: Putative SKIP1, Description = F-box protein SKIP1, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf05610_265415-294695' '(at5g49610 : 83.2) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G33530.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf05615_362978-366249' '(at3g07870 : 106.0) F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT3G23880.1); Has 2008 Blast hits to 1989 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2006; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative , Description = , PFAM = PF07734;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf05645_76454-79740' '(at3g06240 : 96.3) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT4G12560.2); Has 2015 Blast hits to 1993 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2013; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative , Description = , PFAM = PF08268;PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf05645_149807-153847' '(at5g07670 : 477.0) RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT5G51380.1); Has 3082 Blast hits to 1820 proteins in 183 species: Archae - 0; Bacteria - 20; Metazoa - 1308; Fungi - 229; Plants - 1264; Viruses - 0; Other Eukaryotes - 261 (source: NCBI BLink). & (gnl|cdd|37158 : 89.4) no description available & (reliability: 954.0) & (original description: Putative RCOM_1500690, Description = Ubiquitin-protein ligase, putative, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf05680_37695-41314' '(at1g31350 : 258.0) KAR-UP F-box 1 (KUF1); CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G55270.1); Has 661 Blast hits to 661 proteins in 63 species: Archae - 0; Bacteria - 29; Metazoa - 81; Fungi - 0; Plants - 548; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 516.0) & (original description: Putative SKIP25, Description = F-box/kelch-repeat protein SKIP25, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf05732_204064-207500' '(at1g10780 : 493.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT1G67190.2); Has 253 Blast hits to 253 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 251; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 986.0) & (original description: Putative At1g10780, Description = F-box protein At1g10780, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf05799_54676-60655' '(at1g13570 : 221.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G56370.2); Has 1866 Blast hits to 1838 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1866; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative RCOM_1593380, Description = Ubiquitin-protein ligase, putative, PFAM = PF00646;PF08387)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf05824_1337770-1344148' '(at4g05460 : 247.0) RNI-like superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT4G05497.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37158 : 92.9) no description available & (reliability: 494.0) & (original description: Putative SKIP19, Description = F-box protein SKIP19, PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf05896_313500-317977' '(at4g15060 : 86.3) CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G55660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf05960_236134-238655' '(at5g48170 : 137.0) encodes an F-box protein whose protein sequence is similar to SLY1, which belongs to SCF-SLY1 E3 ligase complex. SCF-SLY1 E3 ligase degrades DELLA proteins that are involved in promoting growth. Overexpression of SLY2 can partially compensate sly1-10 mutant phenotype of dwarfism.; SLEEPY2 (SLY2); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G24210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative SNE, Description = F-box protein SNE, PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf05989_469810-473938' '(at1g13570 : 105.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G56370.2); Has 1866 Blast hits to 1838 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1866; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf05989_479667-489833' '(at1g13570 : 136.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G56370.2); Has 1866 Blast hits to 1838 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1866; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative , Description = , PFAM = PF08387;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf06019_54300-57331' '(at1g78100 : 290.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G22220.1); Has 149 Blast hits to 148 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 580.0) & (original description: Putative At1g22220, Description = F-box protein At1g22220, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf06176_155150-158338' '(at1g78100 : 291.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G22220.1); Has 149 Blast hits to 148 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 582.0) & (original description: Putative At1g78100, Description = F-box protein At1g78100, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf06420_85918-89243' '(at2g02870 : 560.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G14330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39642 : 127.0) no description available & (reliability: 1120.0) & (original description: Putative SKIP11, Description = F-box/kelch-repeat protein SKIP11, PFAM = PF01344;PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf06504_77891-84680' '(at4g10925 : 330.0) Nuclear transport factor 2 (NTF2) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G23960.1). & (reliability: 660.0) & (original description: Putative SKIP8, Description = F-box protein SKIP8, PFAM = PF13474)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf06631_122975-125742' '(at1g80440 : 351.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G15670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39642 : 96.2) no description available & (reliability: 702.0) & (original description: Putative At1g80440, Description = F-box/kelch-repeat protein At1g80440, PFAM = PF01344;PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf07054_539190-577640' '(at1g31350 : 314.0) KAR-UP F-box 1 (KUF1); CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G55270.1); Has 661 Blast hits to 661 proteins in 63 species: Archae - 0; Bacteria - 29; Metazoa - 81; Fungi - 0; Plants - 548; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 628.0) & (original description: Putative SKIP25, Description = F-box/kelch-repeat protein SKIP25, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf07152_517021-520256' '(at5g07610 : 145.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G49610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf07226_75289-84593' '(at5g45360 : 331.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Herpesvirus UL92 (InterPro:IPR004289); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 662.0) & (original description: Putative SKIP31, Description = F-box protein SKIP31, PFAM = PF12937;PF03048)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf07272_187839-193147' '(at1g76900 : 578.0) Member of TLP family; tubby like protein 1 (TLP1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 10 (TAIR:AT1G25280.1); Has 1520 Blast hits to 1117 proteins in 153 species: Archae - 0; Bacteria - 107; Metazoa - 432; Fungi - 112; Plants - 488; Viruses - 57; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|37713 : 434.0) no description available & (gnl|cdd|85281 : 335.0) no description available & (reliability: 1080.0) & (original description: Putative TULP8, Description = Tubby-like F-box protein 8, PFAM = PF01167;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf07372_72904-77447' '(at1g61330 : 98.6) FBD, F-box and Leucine Rich Repeat domains containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: FBD / Leucine Rich Repeat domains containing protein (TAIR:AT1G61320.1); Has 1015 Blast hits to 1010 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1009; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 197.2) & (original description: Putative)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf07372_96436-107585' '(at1g61340 : 94.0) F-box family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G21510.1). & (reliability: 181.8) & (original description: Putative)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf07398_106392-108880' '(at1g13570 : 82.8) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G56370.2); Has 1866 Blast hits to 1838 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1866; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf07398_134401-137850' '(at1g13570 : 145.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G56370.2); Has 1866 Blast hits to 1838 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1866; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf07398_134413-137904' '(at1g13570 : 144.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G56370.2); Has 1866 Blast hits to 1838 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1866; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf07462_211712-214965' '(at4g33160 : 316.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G27340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 632.0) & (original description: Putative FBX13, Description = F-box only protein 13, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf07589_124736-161601' '(at5g24560 : 138.0) phloem protein 2-B12 (PP2-B12); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B1 (TAIR:AT2G02230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative , Description = , PFAM = PF14299;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf07712_225623-229937' '(at5g49980 : 869.0) auxin F-box protein 5 (AFB5); CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT4G24390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37158 : 165.0) no description available & (reliability: 1676.0) & (original description: Putative At5g49980, Description = Transport inhibitor response 1-like protein, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf07778_426689-429948' '(at1g67190 : 534.0) F-box/RNI-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT1G10780.1). & (reliability: 1068.0) & (original description: Putative At1g67190, Description = F-box/LRR-repeat protein At1g67190, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf07895_132166-135647' '(at1g23780 : 177.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G23770.1); Has 310 Blast hits to 310 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 0; Plants - 156; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf08020_232514-235797' '(at4g12560 : 89.4) Encodes CPR30 (Constitutive Expresser of PR Genes 30), a F-Box protein that functions as a negative regulator of defense response.; CONSTITUTIVE EXPRESSER OF PR GENES 30 (CPR30); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: negative regulation of defense response; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box associated ubiquitination effector family protein (TAIR:AT4G22390.1); Has 1743 Blast hits to 1730 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1741; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative , Description = , PFAM = PF00646;PF07734)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf08121_120211-123284' '(at1g80440 : 314.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G15670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39642 : 88.9) no description available & (reliability: 628.0) & (original description: Putative At1g80440, Description = F-box/kelch-repeat protein At1g80440, PFAM = PF01344;PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf08193_29085-45142' '(at5g45360 : 308.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Herpesvirus UL92 (InterPro:IPR004289); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 616.0) & (original description: Putative SKIP31, Description = F-box protein SKIP31, PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf08508_314933-319933' '(at4g00755 : 285.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); Has 80 Blast hits to 80 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 11; Plants - 57; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 570.0) & (original description: Putative PGSC0003DMG400027774, Description = , PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf08516_299216-302698' '(at5g07610 : 144.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G49610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf08687_1-6382' '(at4g03220 : 398.0) Protein with RNI-like/FBD-like domains; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT3G59210.4); Has 1478 Blast hits to 1464 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1476; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 796.0) & (original description: Putative At4g03220, Description = Putative F-box/FBD/LRR-repeat protein At4g03220, PFAM = PF00646;PF08387)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf08918_342758-354123' '(at4g08980 : 142.0) Encodes an F-box gene that is a novel negative regulator of AGO1 protein levels and may play a role in ABA signalling and/or response.; F-BOX WITH WD-40 2 (FBW2); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process, posttranscriptional regulation of gene expression; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT4G05460.1); Has 1165 Blast hits to 1048 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 539; Fungi - 16; Plants - 571; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative , Description = , PFAM = PF12937;PF13516;PF13516)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf09100_128234-130731' '(at5g48170 : 128.0) encodes an F-box protein whose protein sequence is similar to SLY1, which belongs to SCF-SLY1 E3 ligase complex. SCF-SLY1 E3 ligase degrades DELLA proteins that are involved in promoting growth. Overexpression of SLY2 can partially compensate sly1-10 mutant phenotype of dwarfism.; SLEEPY2 (SLY2); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G24210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative SNE, Description = F-box protein SNE, PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf09141_243741-250592' '(at5g01720 : 655.0) RNI-like superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G27920.1); Has 15959 Blast hits to 6468 proteins in 357 species: Archae - 0; Bacteria - 920; Metazoa - 6194; Fungi - 1434; Plants - 4975; Viruses - 16; Other Eukaryotes - 2420 (source: NCBI BLink). & (gnl|cdd|39542 : 112.0) no description available & (reliability: 1310.0) & (original description: Putative FBL3, Description = F-box/LRR-repeat protein 3, PFAM = PF13516;PF13516;PF13516;PF13516)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf09150_426365-445599' '(at4g15475 : 725.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: EIN3-binding F box protein 2 (TAIR:AT5G25350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39542 : 134.0) no description available & (reliability: 1450.0) & (original description: Putative FBL4, Description = F-box/LRR-repeat protein 4, PFAM = PF13516;PF13516;PF13516;PF13516;PF13516;PF13516;PF13516;PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf09447_224323-229126' '(at3g12350 : 362.0) F-box family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364). & (reliability: 724.0) & (original description: Putative , Description = , PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf09544_196077-202242' '(at1g21410 : 520.0) AtSKP2;1 is a homolog of human SKP2, the human F-box protein that recruits E2F1. Contains an F-box motif at the N-terminal region and a C-terminal Leu-rich repeat domain. Forms part of an E3-ubiquitin-ligase SCF (Skp1, cullin, F-box) complex and recruits phosphorylated AtE2Fc, a transcriptional factor that might play a role in cell division and during the transition from skotomorphogenesis to photomorphogenesis. AtSKP2;1 (At1g21410) and AtSKP2;2 (At1g77000) may be duplicated genes.; SKP2A; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT1G77000.2); Has 8874 Blast hits to 3879 proteins in 263 species: Archae - 0; Bacteria - 386; Metazoa - 3510; Fungi - 1080; Plants - 2969; Viruses - 9; Other Eukaryotes - 920 (source: NCBI BLink). & (gnl|cdd|39542 : 117.0) no description available & (reliability: 1040.0) & (original description: Putative SKP2A, Description = F-box protein SKP2A, PFAM = PF13516;PF13516;PF13516;PF13516;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf09559_27217-31394' '(at2g42620 : 784.0) The mutations at MAX2 cause increased hypocotyl and petiole elongation in light-grown seedlings. Positional cloning identifies MAX2 as a member of the F-box leucine-rich repeat family of proteins. MAX2 is identical to ORE9, a proposed regulator of leaf senescence. Involved in positive regulation of light responses.; MORE AXILLARY BRANCHES 2 (MAX2); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT4G15475.1); Has 1122 Blast hits to 776 proteins in 97 species: Archae - 0; Bacteria - 2; Metazoa - 391; Fungi - 21; Plants - 636; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (q5vmp0|max2_orysa : 571.0) F-box/LRR-repeat MAX2 homolog (F-box and leucine-rich repeat MAX2 homolog) - Oryza sativa (Rice) & (reliability: 1568.0) & (original description: Putative MAX2A, Description = F-box/LRR-repeat MAX2 homolog A, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf09578_51626-54948' '(at2g02870 : 577.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G14330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39642 : 110.0) no description available & (reliability: 1154.0) & (original description: Putative SKIP11, Description = F-box/kelch-repeat protein SKIP11, PFAM = PF01344;PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf09589_35071-55908' '(at1g16250 : 505.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G63220.2); Has 9062 Blast hits to 5094 proteins in 277 species: Archae - 4; Bacteria - 620; Metazoa - 6949; Fungi - 23; Plants - 1110; Viruses - 34; Other Eukaryotes - 322 (source: NCBI BLink). & (gnl|cdd|39642 : 110.0) no description available & (reliability: 1010.0) & (original description: Putative At1g16250, Description = F-box/kelch-repeat protein At1g16250, PFAM = PF01344;PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf09817_177575-184818' '(at5g27920 : 602.0) F-box family protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT5G01720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39542 : 115.0) no description available & (reliability: 1204.0) & (original description: Putative RCOM_1433980, Description = Ubiquitin-protein ligase, putative, PFAM = PF13516;PF13516;PF13516;PF13516;PF13516;PF13516)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf09885_196153-199754' '(at1g47056 : 584.0) Encodes an F-box protein. Based on genetic analysis appears to be functionally redundant with VFB2,3, and 4. When expression of all 4 genes is reduced plants show defects in growth and reduced expression of auxin response genes.; VIER F-box proteine 1 (VFB1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: stomatal complex, sepal, root, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: VIER F-box proteine 3 (TAIR:AT4G07400.1); Has 4631 Blast hits to 2722 proteins in 229 species: Archae - 0; Bacteria - 68; Metazoa - 1574; Fungi - 394; Plants - 2158; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|37158 : 124.0) no description available & (reliability: 1168.0) & (original description: Putative At1g47056, Description = F-box protein At1g47056, PFAM = PF12937;PF13516;PF13516)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf10627_9210-23669' '(at4g33210 : 1054.0) Encodes SLOMO (SLOW MOTION), a F-box protein required for auxin homeostasis and normal timing of lateral organ initiation at the shoot meristem.; SLOW MOTION (SLOMO); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT4G15475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39542 : 85.4) no description available & (reliability: 2108.0) & (original description: Putative FBL15, Description = F-box/LRR-repeat protein 15, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf10708_293460-296122' '(at4g24210 : 94.0) F-box protein that is involved in GA signaling. Regulates seed germination. Component of E3 ubiquitin complex. Interacts with DELLA proteins.; SLEEPY1 (SLY1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G48170.1); Has 122 Blast hits to 122 proteins in 25 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 9; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative GID2, Description = F-box protein GID2, PFAM = PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf11616_83759-86958' '(at5g60570 : 533.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G26930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39642 : 108.0) no description available & (reliability: 1066.0) & (original description: Putative At5g60570, Description = F-box/kelch-repeat protein At5g60570, PFAM = PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf11724_482409-486020' '(at3g59200 : 142.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT4G14096.1); Has 2158 Blast hits to 2093 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2158; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative , Description = , PFAM = PF00646;PF07723;PF08387)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf12094_10815-14009' '(at3g06240 : 169.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT4G12560.2); Has 2015 Blast hits to 1993 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2013; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative , Description = , PFAM = PF12937;PF08268)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf12159_13331-21594' '(at4g02760 : 243.0) RNI-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT4G02740.1). & (gnl|cdd|39542 : 87.7) no description available & (reliability: 486.0) & (original description: Putative MTR_4g095000, Description = F-box protein, putative, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf12159_914427-921859' '(at3g54650 : 516.0) FBL17; FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: generative cell mitosis, seed development, embryo development, ubiquitin-dependent protein catabolic process, pollen development; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); Has 1738 Blast hits to 1195 proteins in 149 species: Archae - 0; Bacteria - 27; Metazoa - 733; Fungi - 89; Plants - 663; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (reliability: 1032.0) & (original description: Putative FBL17, Description = F-box/LRR-repeat protein 17, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf12609_77517-82507' '(at2g25490 : 717.0) Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3.; EIN3-binding F box protein 1 (EBF1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: EIN3-binding F box protein 2 (TAIR:AT5G25350.1); Has 13069 Blast hits to 4728 proteins in 296 species: Archae - 0; Bacteria - 528; Metazoa - 5097; Fungi - 1628; Plants - 4199; Viruses - 9; Other Eukaryotes - 1608 (source: NCBI BLink). & (gnl|cdd|37158 : 142.0) no description available & (reliability: 1434.0) & (original description: Putative EBF1, Description = EIN3-binding F-box protein 1, PFAM = PF13516;PF13516;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf13002_185600-203797' '(at2g44130 : 206.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G59940.1); Has 5544 Blast hits to 3569 proteins in 209 species: Archae - 8; Bacteria - 363; Metazoa - 3928; Fungi - 26; Plants - 960; Viruses - 5; Other Eukaryotes - 254 (source: NCBI BLink). & (gnl|cdd|39642 : 96.2) no description available & (reliability: 412.0) & (original description: Putative Ccrd_013213, Description = Galactose oxidase, beta-propeller, PFAM = PF12937;PF01344;PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf13676_284753-288826' '(at5g07670 : 473.0) RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT5G51380.1); Has 3082 Blast hits to 1820 proteins in 183 species: Archae - 0; Bacteria - 20; Metazoa - 1308; Fungi - 229; Plants - 1264; Viruses - 0; Other Eukaryotes - 261 (source: NCBI BLink). & (gnl|cdd|37158 : 91.7) no description available & (reliability: 946.0) & (original description: Putative RCOM_1500690, Description = Ubiquitin-protein ligase, putative, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf14102_41103-43942' '(at3g06240 : 144.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT4G12560.2); Has 2015 Blast hits to 1993 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2013; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf14115_16633-21316' '(at3g03360 : 114.0) F-box/RNI-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT3G18150.1); Has 2219 Blast hits to 2186 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 6; Plants - 2203; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative PGSC0003DMG400013717, Description = , PFAM = PF08387;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf14115_99442-105385' '(at3g03360 : 104.0) F-box/RNI-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT3G18150.1); Has 2219 Blast hits to 2186 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 6; Plants - 2203; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative PGSC0003DMG400013717, Description = , PFAM = PF08387;PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf14577_175198-178412' '(at1g30090 : 567.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT2G24540.1); Has 6648 Blast hits to 4175 proteins in 221 species: Archae - 14; Bacteria - 391; Metazoa - 4969; Fungi - 0; Plants - 1047; Viruses - 9; Other Eukaryotes - 218 (source: NCBI BLink). & (gnl|cdd|39642 : 127.0) no description available & (reliability: 1134.0) & (original description: Putative At1g30090, Description = F-box/kelch-repeat protein At1g30090, PFAM = PF00646;PF01344;PF01344)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf14714_96733-103283' '(at2g32560 : 420.0) F-box family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G26850.1); Has 86 Blast hits to 86 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 840.0) & (original description: Putative BnaA09g47460D, Description = BnaA09g47460D protein, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf14881_297899-314569' '(at4g15475 : 722.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: EIN3-binding F box protein 2 (TAIR:AT5G25350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39542 : 134.0) no description available & (reliability: 1444.0) & (original description: Putative FBL4, Description = F-box/LRR-repeat protein 4, PFAM = PF13516;PF13516;PF13516;PF13516;PF13516;PF13516;PF13516;PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf15263_92714-95751' '(at2g27310 : 250.0) F-box family protein; BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G36090.1); Has 105 Blast hits to 105 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 500.0) & (original description: Putative BnaA03g22470D, Description = BnaA03g22470D protein, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf15326_2766-5569' '(at3g07870 : 257.0) F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT3G23880.1); Has 2008 Blast hits to 1989 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2006; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 514.0) & (original description: Putative , Description = , PFAM = PF00646;PF07734)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf15394_43641-46915' '(at1g80570 : 641.0) RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT4G15475.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1282.0) & (original description: Putative FBL14, Description = F-box/LRR-repeat protein 14, PFAM = PF13516;PF13516;PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf16342_28924-33321' '(at3g26000 : 338.0) Ribonuclease inhibitor; BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT3G27290.1); Has 103 Blast hits to 103 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 22; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 676.0) & (original description: Putative SKIP14, Description = F-box protein SKIP14, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf16812_1-2622' '(at3g23880 : 149.0) F-box and associated interaction domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G06240.1); Has 2315 Blast hits to 2300 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2313; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative POPTR_0008s20430g, Description = F-box family protein, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf16812_4078-7213' '(at3g06240 : 125.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT4G12560.2); Has 2015 Blast hits to 1993 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2013; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative , Description = , PFAM = PF00646;PF07734)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf17652_38410-46328' '(at1g06110 : 495.0) SKP1/ASK-interacting protein 16 (SKIP16); CONTAINS InterPro DOMAIN/s: ApaG (InterPro:IPR007474); Has 2063 Blast hits to 2061 proteins in 779 species: Archae - 0; Bacteria - 1378; Metazoa - 194; Fungi - 63; Plants - 89; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39609 : 259.0) no description available & (gnl|cdd|67970 : 115.0) no description available & (reliability: 990.0) & (original description: Putative SKIP16, Description = F-box protein SKIP16, PFAM = PF09346;PF04379;PF12937)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf20904_163340-167481' '(at5g02700 : 86.3) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT3G28410.1); Has 2196 Blast hits to 2168 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 2186; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf23978_37263-43327' '(at2g47900 : 608.0) Member of TLP family; tubby like protein 3 (TLP3); FUNCTIONS IN: phosphoric diester hydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby-like protein 9 (TAIR:AT3G06380.1). & (gnl|cdd|37713 : 441.0) no description available & (gnl|cdd|85281 : 298.0) no description available & (reliability: 1216.0) & (original description: Putative TULP3, Description = Tubby-like F-box protein 3, PFAM = PF00646;PF01167)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf28181_81806-85014' '(at1g31350 : 325.0) KAR-UP F-box 1 (KUF1); CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G55270.1); Has 661 Blast hits to 661 proteins in 63 species: Archae - 0; Bacteria - 29; Metazoa - 81; Fungi - 0; Plants - 548; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 650.0) & (original description: Putative SKIP25, Description = F-box/kelch-repeat protein SKIP25, PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf28259_43438-54575' '(at4g00755 : 283.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); Has 80 Blast hits to 80 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 11; Plants - 57; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 566.0) & (original description: Putative PGSC0003DMG400027774, Description = , PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf28259_56489-63411' '(at4g00755 : 234.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); Has 80 Blast hits to 80 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 11; Plants - 57; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative PGSC0003DMG400027774, Description = , PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf28259_56549-61878' '(at4g00755 : 115.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); Has 80 Blast hits to 80 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 11; Plants - 57; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative PGSC0003DMG400027774, Description = , PFAM = )' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf33253_5037-8569' '(at1g13570 : 159.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G56370.2); Has 1866 Blast hits to 1838 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1866; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative PGSC0003DMG404013246, Description = Putative F-box/FBD/LRR-repeat protein-like, PFAM = PF00646)' T '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'niben101scf37888_129172-131438' '(at4g12560 : 87.0) Encodes CPR30 (Constitutive Expresser of PR Genes 30), a F-Box protein that functions as a negative regulator of defense response.; CONSTITUTIVE EXPRESSER OF PR GENES 30 (CPR30); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: negative regulation of defense response; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box associated ubiquitination effector family protein (TAIR:AT4G22390.1); Has 1743 Blast hits to 1730 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1741; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative , Description = , PFAM = PF00646)' T '29.5.11.4.3.3' 'protein.degradation.ubiquitin.E3.SCF.cullin' 'nbv0.3scaffold15721_24723-33070' '(at4g02570 : 1142.0) Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response.; cullin 1 (CUL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, conserved site (InterPro:IPR016157), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 2 (TAIR:AT1G02980.1). & (gnl|cdd|37377 : 691.0) no description available & (gnl|cdd|35206 : 348.0) no description available & (reliability: 2284.0) & (original description: Putative CUL1, Description = Cullin-1, PFAM = PF10557;PF00888;PF00888)' T '29.5.11.4.3.3' 'protein.degradation.ubiquitin.E3.SCF.cullin' 'nbv0.5scaffold885_443301-451687' '(at4g02570 : 140.0) Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response.; cullin 1 (CUL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, conserved site (InterPro:IPR016157), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 2 (TAIR:AT1G02980.1). & (gnl|cdd|37377 : 101.0) no description available & (reliability: 280.0) & (original description: Putative PGSC0003DMG400024743, Description = Cullin 1, putative isoform 1, PFAM = PF00888)' T '29.5.11.4.3.3' 'protein.degradation.ubiquitin.E3.SCF.cullin' 'niben044scf00003322ctg000_1149-9177' '(at5g46210 : 507.0) Arabidopsis CULLIN4 (CUL4) forms an E3 ubiquitin ligase with the CDD complex and a common catalytic subunit RBX1 in mediating light control of development. This CUL4-based E3 ligase is essential for the repression of photomorphogenesis. The partial loss of CUL4 function resulted in a constitutive photomorphogenic phenotype with respect to morphogenesis and light-regulated gene expression. CUL4 exhibits a synergistic genetic interaction with COP10 and DET1.; cullin4 (CUL4); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, N-terminal (InterPro:IPR001373), Cullin, conserved site (InterPro:IPR016157), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 3B (TAIR:AT1G69670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37378 : 295.0) no description available & (gnl|cdd|35206 : 132.0) no description available & (reliability: 1014.0) & (original description: Putative v1g90580, Description = Predicted protein, PFAM = PF00888)' T '29.5.11.4.3.3' 'protein.degradation.ubiquitin.E3.SCF.cullin' 'niben044scf00008149ctg003_260-5532' '(at1g30070 : 278.0) SGS domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Siah interacting protein, N-terminal (InterPro:IPR015120), CS-like domain (InterPro:IPR007052), SGS (InterPro:IPR007699), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G30060.1). & (gnl|cdd|38470 : 203.0) no description available & (reliability: 556.0) & (original description: Putative , Description = , PFAM = PF09032;PF04969)' T '29.5.11.4.3.3' 'protein.degradation.ubiquitin.E3.SCF.cullin' 'niben044scf00016946ctg003_4474-12162' '(at4g02570 : 1014.0) Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response.; cullin 1 (CUL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, conserved site (InterPro:IPR016157), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 2 (TAIR:AT1G02980.1). & (gnl|cdd|37377 : 655.0) no description available & (gnl|cdd|35206 : 361.0) no description available & (reliability: 2028.0) & (original description: Putative CUL1, Description = Cullin-1, PFAM = PF00888;PF10557)' T '29.5.11.4.3.3' 'protein.degradation.ubiquitin.E3.SCF.cullin' 'niben101scf01259_389780-394697' '(at1g30070 : 280.0) SGS domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Siah interacting protein, N-terminal (InterPro:IPR015120), CS-like domain (InterPro:IPR007052), SGS (InterPro:IPR007699), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G30060.1). & (gnl|cdd|38470 : 205.0) no description available & (reliability: 560.0) & (original description: Putative , Description = , PFAM = PF09032;PF04969)' T '29.5.11.4.3.3' 'protein.degradation.ubiquitin.E3.SCF.cullin' 'niben101scf02857_15615-49793' '(at5g46210 : 1146.0) Arabidopsis CULLIN4 (CUL4) forms an E3 ubiquitin ligase with the CDD complex and a common catalytic subunit RBX1 in mediating light control of development. This CUL4-based E3 ligase is essential for the repression of photomorphogenesis. The partial loss of CUL4 function resulted in a constitutive photomorphogenic phenotype with respect to morphogenesis and light-regulated gene expression. CUL4 exhibits a synergistic genetic interaction with COP10 and DET1.; cullin4 (CUL4); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, N-terminal (InterPro:IPR001373), Cullin, conserved site (InterPro:IPR016157), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 3B (TAIR:AT1G69670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37378 : 846.0) no description available & (gnl|cdd|35206 : 449.0) no description available & (reliability: 2292.0) & (original description: Putative CUL4, Description = Cullin-4, PFAM = PF00888;PF10557)' T '29.5.11.4.3.3' 'protein.degradation.ubiquitin.E3.SCF.cullin' 'niben101scf03094_536337-540859' '(at1g30070 : 267.0) SGS domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Siah interacting protein, N-terminal (InterPro:IPR015120), CS-like domain (InterPro:IPR007052), SGS (InterPro:IPR007699), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G30060.1). & (gnl|cdd|38470 : 214.0) no description available & (gnl|cdd|29314 : 81.6) no description available & (reliability: 534.0) & (original description: Putative , Description = , PFAM = PF09032;PF04969)' T '29.5.11.4.3.3' 'protein.degradation.ubiquitin.E3.SCF.cullin' 'niben101scf04019_827579-836050' '(at4g02570 : 1186.0) Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response.; cullin 1 (CUL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, conserved site (InterPro:IPR016157), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 2 (TAIR:AT1G02980.1). & (gnl|cdd|37377 : 724.0) no description available & (gnl|cdd|35206 : 376.0) no description available & (reliability: 2372.0) & (original description: Putative cul1D, Description = Cullin 1D, PFAM = PF10557;PF00888)' T '29.5.11.4.3.3' 'protein.degradation.ubiquitin.E3.SCF.cullin' 'niben101scf04967_457391-465108' '(at4g02570 : 1209.0) Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response.; cullin 1 (CUL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, conserved site (InterPro:IPR016157), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 2 (TAIR:AT1G02980.1). & (gnl|cdd|37377 : 765.0) no description available & (gnl|cdd|35206 : 376.0) no description available & (reliability: 2418.0) & (original description: Putative CUL1, Description = Cullin-1, PFAM = PF00888;PF10557)' T '29.5.11.4.3.3' 'protein.degradation.ubiquitin.E3.SCF.cullin' 'niben101scf06132_24036-33275' '(at4g02570 : 180.0) Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response.; cullin 1 (CUL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, conserved site (InterPro:IPR016157), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 2 (TAIR:AT1G02980.1). & (gnl|cdd|37377 : 127.0) no description available & (reliability: 360.0) & (original description: Putative PGSC0003DMG400024743, Description = Cullin 1, putative isoform 1, PFAM = PF00888)' T '29.5.11.4.3.3' 'protein.degradation.ubiquitin.E3.SCF.cullin' 'niben101scf20325_4462-12621' '(at4g02570 : 1150.0) Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response.; cullin 1 (CUL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, conserved site (InterPro:IPR016157), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 2 (TAIR:AT1G02980.1). & (gnl|cdd|37377 : 739.0) no description available & (gnl|cdd|35206 : 379.0) no description available & (reliability: 2300.0) & (original description: Putative CUL1, Description = Cullin-1, PFAM = PF00888;PF10557)' T '29.5.11.4.3.4' 'protein.degradation.ubiquitin.E3.SCF.RBX' 'niben101scf02749_2576-15852' '(at5g20570 : 172.0) Encodes a ring-box 1 like protein and component of the SCF ubiquitinization complex mediating auxin responses. Forms a E3 ubiquitin ligase complex with CUL3A and At1g21780.1 a BTB domain protein.; RING-box 1 (RBX1); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G42830.1); Has 1088 Blast hits to 1088 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 498; Fungi - 214; Plants - 176; Viruses - 3; Other Eukaryotes - 197 (source: NCBI BLink). & (gnl|cdd|38141 : 161.0) no description available & (gnl|cdd|34793 : 133.0) no description available & (reliability: 344.0) & (original description: Putative RBX1A, Description = RING-box protein 1a, PFAM = PF12678)' T '29.5.11.4.3.4' 'protein.degradation.ubiquitin.E3.SCF.RBX' 'niben101scf02763_326353-342890' '(at5g20570 : 179.0) Encodes a ring-box 1 like protein and component of the SCF ubiquitinization complex mediating auxin responses. Forms a E3 ubiquitin ligase complex with CUL3A and At1g21780.1 a BTB domain protein.; RING-box 1 (RBX1); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G42830.1); Has 1088 Blast hits to 1088 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 498; Fungi - 214; Plants - 176; Viruses - 3; Other Eukaryotes - 197 (source: NCBI BLink). & (gnl|cdd|38141 : 164.0) no description available & (gnl|cdd|34793 : 132.0) no description available & (reliability: 358.0) & (original description: Putative pip1, Description = RING-box protein 1, PFAM = PF12678)' T '29.5.11.4.3.4' 'protein.degradation.ubiquitin.E3.SCF.RBX' 'niben101scf04901_112110-129302' '(at5g20570 : 123.0) Encodes a ring-box 1 like protein and component of the SCF ubiquitinization complex mediating auxin responses. Forms a E3 ubiquitin ligase complex with CUL3A and At1g21780.1 a BTB domain protein.; RING-box 1 (RBX1); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G42830.1); Has 1088 Blast hits to 1088 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 498; Fungi - 214; Plants - 176; Viruses - 3; Other Eukaryotes - 197 (source: NCBI BLink). & (gnl|cdd|38141 : 105.0) no description available & (gnl|cdd|34793 : 82.0) no description available & (reliability: 246.0) & (original description: Putative RBX1, Description = RING-box protein 1, PFAM = PF12678)' T '29.5.11.4.3.4' 'protein.degradation.ubiquitin.E3.SCF.RBX' 'niben101scf05063_286220-299467' '(at5g20570 : 187.0) Encodes a ring-box 1 like protein and component of the SCF ubiquitinization complex mediating auxin responses. Forms a E3 ubiquitin ligase complex with CUL3A and At1g21780.1 a BTB domain protein.; RING-box 1 (RBX1); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G42830.1); Has 1088 Blast hits to 1088 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 498; Fungi - 214; Plants - 176; Viruses - 3; Other Eukaryotes - 197 (source: NCBI BLink). & (gnl|cdd|38141 : 163.0) no description available & (gnl|cdd|34793 : 132.0) no description available & (reliability: 374.0) & (original description: Putative RBX1A, Description = RING-box protein 1a, PFAM = PF12678)' T '29.5.11.4.4' 'protein.degradation.ubiquitin.E3.APC' 'nbv0.5scaffold56_1030787-1073161' '(at5g05560 : 1732.0) Arabidopsis thaliana E3 ubiquitin ligase; EMBRYO DEFECTIVE 2771 (EMB2771); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37069 : 1027.0) no description available & (reliability: 3464.0) & (original description: Putative APC1, Description = Anaphase-promoting complex subunit 1, PFAM = PF12859)' T '29.5.11.4.4' 'protein.degradation.ubiquitin.E3.APC' 'nbv0.5scaffold8361_29956-34014' '(at5g05560 : 108.0) Arabidopsis thaliana E3 ubiquitin ligase; EMBRYO DEFECTIVE 2771 (EMB2771); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative Sb09g016860, Description = Putative uncharacterized protein Sb09g016860, PFAM = )' T '29.5.11.4.4' 'protein.degradation.ubiquitin.E3.APC' 'niben044scf00008583ctg016_1903-6301' '(at5g05560 : 234.0) Arabidopsis thaliana E3 ubiquitin ligase; EMBRYO DEFECTIVE 2771 (EMB2771); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37069 : 100.0) no description available & (reliability: 468.0) & (original description: Putative APC1, Description = Anaphase-promoting complex subunit 1, PFAM = )' T '29.5.11.4.4' 'protein.degradation.ubiquitin.E3.APC' 'niben044scf00008583ctg019_1-18760' '(at5g05560 : 734.0) Arabidopsis thaliana E3 ubiquitin ligase; EMBRYO DEFECTIVE 2771 (EMB2771); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37069 : 457.0) no description available & (reliability: 1468.0) & (original description: Putative APC1, Description = Anaphase-promoting complex subunit 1, PFAM = )' T '29.5.11.4.4' 'protein.degradation.ubiquitin.E3.APC' 'niben044scf00015198ctg004_1-3652' '(at4g21530 : 209.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); Has 2387 Blast hits to 1893 proteins in 265 species: Archae - 2; Bacteria - 820; Metazoa - 693; Fungi - 413; Plants - 211; Viruses - 0; Other Eukaryotes - 248 (source: NCBI BLink). & (reliability: 418.0) & (original description: Putative APC4, Description = Anaphase-promoting complex subunit 4, PFAM = )' T '29.5.11.4.4' 'protein.degradation.ubiquitin.E3.APC' 'niben044scf00038059ctg001_2923-14018' '(at2g04660 : 812.0) a highly conserved ubiquitin-protein ligase involved in cell cycle regulation; anaphase-promoting complex/cyclosome 2 (APC2); FUNCTIONS IN: ubiquitin-protein ligase activity, ubiquitin protein ligase binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cullin homology (InterPro:IPR016158), Anaphase promoting complex subunit 2 (InterPro:IPR014786), Cullin, N-terminal (InterPro:IPR001373); BEST Arabidopsis thaliana protein match is: cullin4 (TAIR:AT5G46210.1); Has 1400 Blast hits to 1393 proteins in 217 species: Archae - 0; Bacteria - 0; Metazoa - 534; Fungi - 454; Plants - 255; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|37376 : 458.0) no description available & (gnl|cdd|85098 : 89.3) no description available & (reliability: 1624.0) & (original description: Putative APC2, Description = Anaphase-promoting complex subunit 2, PFAM = PF00888)' T '29.5.11.4.4' 'protein.degradation.ubiquitin.E3.APC' 'niben044scf00038059ctg002_1-3369' '(at2g04660 : 283.0) a highly conserved ubiquitin-protein ligase involved in cell cycle regulation; anaphase-promoting complex/cyclosome 2 (APC2); FUNCTIONS IN: ubiquitin-protein ligase activity, ubiquitin protein ligase binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cullin homology (InterPro:IPR016158), Anaphase promoting complex subunit 2 (InterPro:IPR014786), Cullin, N-terminal (InterPro:IPR001373); BEST Arabidopsis thaliana protein match is: cullin4 (TAIR:AT5G46210.1); Has 1400 Blast hits to 1393 proteins in 217 species: Archae - 0; Bacteria - 0; Metazoa - 534; Fungi - 454; Plants - 255; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|37376 : 249.0) no description available & (gnl|cdd|85098 : 93.1) no description available & (reliability: 566.0) & (original description: Putative APC2, Description = Anaphase-promoting complex subunit 2, PFAM = PF00888;PF08672)' T '29.5.11.4.4' 'protein.degradation.ubiquitin.E3.APC' 'niben101scf02764_161758-208306' '(at5g05560 : 1835.0) Arabidopsis thaliana E3 ubiquitin ligase; EMBRYO DEFECTIVE 2771 (EMB2771); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37069 : 1044.0) no description available & (reliability: 3670.0) & (original description: Putative APC1, Description = Anaphase-promoting complex subunit 1, PFAM = PF12859)' T '29.5.11.4.4' 'protein.degradation.ubiquitin.E3.APC' 'niben101scf02764_197145-199881' '(at5g05560 : 141.0) Arabidopsis thaliana E3 ubiquitin ligase; EMBRYO DEFECTIVE 2771 (EMB2771); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37069 : 111.0) no description available & (reliability: 282.0) & (original description: Putative apc1, Description = Anaphase-promoting complex subunit 1, PFAM = )' T '29.5.11.4.4' 'protein.degradation.ubiquitin.E3.APC' 'niben101scf07069_191791-226551' '(at4g21530 : 942.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); Has 2387 Blast hits to 1893 proteins in 265 species: Archae - 2; Bacteria - 820; Metazoa - 693; Fungi - 413; Plants - 211; Viruses - 0; Other Eukaryotes - 248 (source: NCBI BLink). & (gnl|cdd|39840 : 338.0) no description available & (reliability: 1884.0) & (original description: Putative APC4, Description = Anaphase-promoting complex subunit 4, PFAM = PF12894;PF12896)' T '29.5.11.4.4' 'protein.degradation.ubiquitin.E3.APC' 'niben101scf10322_260450-277065' '(at2g04660 : 1096.0) a highly conserved ubiquitin-protein ligase involved in cell cycle regulation; anaphase-promoting complex/cyclosome 2 (APC2); FUNCTIONS IN: ubiquitin-protein ligase activity, ubiquitin protein ligase binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cullin homology (InterPro:IPR016158), Anaphase promoting complex subunit 2 (InterPro:IPR014786), Cullin, N-terminal (InterPro:IPR001373); BEST Arabidopsis thaliana protein match is: cullin4 (TAIR:AT5G46210.1); Has 1400 Blast hits to 1393 proteins in 217 species: Archae - 0; Bacteria - 0; Metazoa - 534; Fungi - 454; Plants - 255; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|37376 : 707.0) no description available & (gnl|cdd|85098 : 184.0) no description available & (reliability: 2192.0) & (original description: Putative APC2, Description = Anaphase-promoting complex subunit 2, PFAM = PF08672;PF00888)' T '29.5.11.4.5' 'protein.degradation.ubiquitin.E3.BTB/POZ Cullin3' 'niben101scf07652_262246-266370' '(at4g08455 : 291.0) BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G01640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39642 : 91.2) no description available & (gnl|cdd|84929 : 83.4) no description available & (reliability: 582.0) & (original description: Putative At4g08455, Description = BTB/POZ domain-containing protein At4g08455, PFAM = PF00651)' T '29.5.11.4.5.1' 'protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.Cullin3' 'nbv0.3scaffold38919_1-8710' '(at1g26830 : 1189.0) Cullin, putative, similar to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with other components of E3 ligase complex suggesting it functions in RUB-modification. Forms complexes with BTB domain proteins forming a novel class of E3-based ubiquitin protein-ligase complexes. Mutant is early flowering and has a reduced sensitivity to far-red light. cul3a/cul3b homozygous/heterozygous plants are embryo lethal.; cullin 3 (CUL3); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 3B (TAIR:AT1G69670.1); Has 2310 Blast hits to 2269 proteins in 235 species: Archae - 0; Bacteria - 9; Metazoa - 1034; Fungi - 455; Plants - 372; Viruses - 0; Other Eukaryotes - 440 (source: NCBI BLink). & (gnl|cdd|37377 : 715.0) no description available & (gnl|cdd|35206 : 427.0) no description available & (reliability: 2378.0) & (original description: Putative CUL3A, Description = Cullin-3A, PFAM = PF00888;PF10557)' T '29.5.11.4.5.1' 'protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.Cullin3' 'niben101scf01326_511382-517246' '(at1g26830 : 1207.0) Cullin, putative, similar to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with other components of E3 ligase complex suggesting it functions in RUB-modification. Forms complexes with BTB domain proteins forming a novel class of E3-based ubiquitin protein-ligase complexes. Mutant is early flowering and has a reduced sensitivity to far-red light. cul3a/cul3b homozygous/heterozygous plants are embryo lethal.; cullin 3 (CUL3); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 3B (TAIR:AT1G69670.1); Has 2310 Blast hits to 2269 proteins in 235 species: Archae - 0; Bacteria - 9; Metazoa - 1034; Fungi - 455; Plants - 372; Viruses - 0; Other Eukaryotes - 440 (source: NCBI BLink). & (gnl|cdd|37377 : 727.0) no description available & (gnl|cdd|35206 : 450.0) no description available & (reliability: 2414.0) & (original description: Putative CUL3A, Description = Cullin-3A, PFAM = PF10557;PF00888)' T '29.5.11.4.5.1' 'protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.Cullin3' 'niben101scf06545_347127-354761' '(at1g26830 : 1198.0) Cullin, putative, similar to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with other components of E3 ligase complex suggesting it functions in RUB-modification. Forms complexes with BTB domain proteins forming a novel class of E3-based ubiquitin protein-ligase complexes. Mutant is early flowering and has a reduced sensitivity to far-red light. cul3a/cul3b homozygous/heterozygous plants are embryo lethal.; cullin 3 (CUL3); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 3B (TAIR:AT1G69670.1); Has 2310 Blast hits to 2269 proteins in 235 species: Archae - 0; Bacteria - 9; Metazoa - 1034; Fungi - 455; Plants - 372; Viruses - 0; Other Eukaryotes - 440 (source: NCBI BLink). & (gnl|cdd|37377 : 713.0) no description available & (gnl|cdd|35206 : 428.0) no description available & (reliability: 2396.0) & (original description: Putative CUL3A, Description = Cullin-3A, PFAM = PF00888;PF10557)' T '29.5.11.4.5.2' 'protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ' 'nbv0.3scaffold44216_478-12270' '(at3g06190 : 598.0) BTB-POZ and MATH domain 2 (BPM2); CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 1 (TAIR:AT5G19000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37198 : 101.0) no description available & (gnl|cdd|58100 : 95.1) no description available & (reliability: 1196.0) & (original description: Putative BPM2, Description = BTB/POZ and MATH domain-containing protein 2, PFAM = PF00651)' T '29.5.11.4.5.2' 'protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ' 'nbv0.3scaffold84141_1-5311' '(at3g06190 : 621.0) BTB-POZ and MATH domain 2 (BPM2); CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 1 (TAIR:AT5G19000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37198 : 95.3) no description available & (gnl|cdd|58100 : 93.6) no description available & (reliability: 1242.0) & (original description: Putative BPM2, Description = BTB/POZ and MATH domain-containing protein 2, PFAM = PF00651)' T '29.5.11.4.5.2' 'protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ' 'nbv0.5scaffold209_267675-272990' '(at1g21780 : 515.0) BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B.; BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G55760.1); Has 5195 Blast hits to 5164 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 3886; Fungi - 25; Plants - 983; Viruses - 68; Other Eukaryotes - 233 (source: NCBI BLink). & (gnl|cdd|84929 : 86.5) no description available & (reliability: 1030.0) & (original description: Putative At1g21780, Description = BTB/POZ domain-containing protein At1g21780, PFAM = PF00651)' T '29.5.11.4.5.2' 'protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ' 'nbv0.5scaffold2714_267352-278118' '(at2g39760 : 284.0) BPM3; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 1 (TAIR:AT5G19000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39642 : 100.0) no description available & (gnl|cdd|84929 : 94.6) no description available & (reliability: 568.0) & (original description: Putative BPM1, Description = BTB/POZ and MATH domain-containing protein 3, PFAM = PF00651)' T '29.5.11.4.5.2' 'protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ' 'niben044scf00004095ctg002_151-9966' '(at3g03740 : 538.0) BTB-POZ and MATH domain 4 (BPM4); CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 5 (TAIR:AT5G21010.1); Has 5789 Blast hits to 5682 proteins in 201 species: Archae - 0; Bacteria - 0; Metazoa - 3860; Fungi - 138; Plants - 1466; Viruses - 48; Other Eukaryotes - 277 (source: NCBI BLink). & (gnl|cdd|37198 : 98.8) no description available & (gnl|cdd|58100 : 95.9) no description available & (reliability: 992.0) & (original description: Putative BPM5, Description = BTB/POZ and MATH domain-containing protein 5, PFAM = PF00917;PF00651)' T '29.5.11.4.5.2' 'protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ' 'niben044scf00028174ctg010_1-4326' '(at2g39760 : 275.0) BPM3; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 1 (TAIR:AT5G19000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39642 : 94.3) no description available & (gnl|cdd|84929 : 92.3) no description available & (reliability: 550.0) & (original description: Putative BPM1, Description = BTB/POZ and MATH domain-containing protein 3, PFAM = PF00651)' T '29.5.11.4.5.2' 'protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ' 'niben044scf00043009ctg002_13468-20849' '(at5g63160 : 379.0) BTB and TAZ domain protein. Short-lived nuclear-cytoplasmic protein targeted for degradation by the 26S proteosome pathway. Acts redundantly with BT2 and BT3 during female gametophyte development.; BTB and TAZ domain protein 1 (BT1); CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 2 (TAIR:AT3G48360.1); Has 1462 Blast hits to 1460 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 839; Fungi - 0; Plants - 555; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|36989 : 209.0) no description available & (reliability: 758.0) & (original description: Putative BT1, Description = BTB/POZ and TAZ domain-containing protein 1, PFAM = PF00651;PF02135)' T '29.5.11.4.5.2' 'protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ' 'niben044scf00053993ctg000_1123-6216' '(at1g05690 : 380.0) BTB and TAZ domain protein. Acts redunantly with BT1 and BT2 during female gametophyte development. Acts with BT2 during male gametophyte development.; BTB and TAZ domain protein 3 (BT3); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: embryo sac development, pollen development; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 4 (TAIR:AT5G67480.2); Has 1903 Blast hits to 1903 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 1048; Fungi - 0; Plants - 775; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|36989 : 233.0) no description available & (reliability: 760.0) & (original description: Putative BT3, Description = BTB/POZ and TAZ domain-containing protein 3, PFAM = PF02135;PF00651)' T '29.5.11.4.5.2' 'protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ' 'niben101ctg15836_1-3883' '(at5g63160 : 373.0) BTB and TAZ domain protein. Short-lived nuclear-cytoplasmic protein targeted for degradation by the 26S proteosome pathway. Acts redundantly with BT2 and BT3 during female gametophyte development.; BTB and TAZ domain protein 1 (BT1); CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 2 (TAIR:AT3G48360.1); Has 1462 Blast hits to 1460 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 839; Fungi - 0; Plants - 555; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|36989 : 199.0) no description available & (reliability: 746.0) & (original description: Putative BT1, Description = BTB/POZ and TAZ domain-containing protein 1, PFAM = PF00651;PF02135)' T '29.5.11.4.5.2' 'protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ' 'niben101scf00168_1158580-1163542' '(at1g05690 : 380.0) BTB and TAZ domain protein. Acts redunantly with BT1 and BT2 during female gametophyte development. Acts with BT2 during male gametophyte development.; BTB and TAZ domain protein 3 (BT3); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: embryo sac development, pollen development; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 4 (TAIR:AT5G67480.2); Has 1903 Blast hits to 1903 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 1048; Fungi - 0; Plants - 775; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|36989 : 237.0) no description available & (reliability: 760.0) & (original description: Putative BT3, Description = BTB/POZ and TAZ domain-containing protein 3, PFAM = PF02135;PF00651)' T '29.5.11.4.5.2' 'protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ' 'niben101scf00862_98786-120256' '(at3g03740 : 531.0) BTB-POZ and MATH domain 4 (BPM4); CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 5 (TAIR:AT5G21010.1); Has 5789 Blast hits to 5682 proteins in 201 species: Archae - 0; Bacteria - 0; Metazoa - 3860; Fungi - 138; Plants - 1466; Viruses - 48; Other Eukaryotes - 277 (source: NCBI BLink). & (gnl|cdd|58100 : 94.0) no description available & (gnl|cdd|37198 : 91.5) no description available & (reliability: 1022.0) & (original description: Putative BPM4, Description = BTB/POZ and MATH domain-containing protein 4, PFAM = PF00651)' T '29.5.11.4.5.2' 'protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ' 'niben101scf00934_136668-144568' '(at3g06190 : 624.0) BTB-POZ and MATH domain 2 (BPM2); CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 1 (TAIR:AT5G19000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37198 : 94.9) no description available & (gnl|cdd|58100 : 92.8) no description available & (reliability: 1248.0) & (original description: Putative BPM2, Description = BTB/POZ and MATH domain-containing protein 2, PFAM = PF00651)' T '29.5.11.4.5.2' 'protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ' 'niben101scf01383_709322-718883' '(at3g03740 : 572.0) BTB-POZ and MATH domain 4 (BPM4); CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 5 (TAIR:AT5G21010.1); Has 5789 Blast hits to 5682 proteins in 201 species: Archae - 0; Bacteria - 0; Metazoa - 3860; Fungi - 138; Plants - 1466; Viruses - 48; Other Eukaryotes - 277 (source: NCBI BLink). & (gnl|cdd|58100 : 96.7) no description available & (gnl|cdd|37198 : 90.7) no description available & (reliability: 1056.0) & (original description: Putative BPM4, Description = BTB/POZ and MATH domain-containing protein 4, PFAM = PF00651)' T '29.5.11.4.5.2' 'protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ' 'niben101scf04783_49398-60647' '(at3g06190 : 600.0) BTB-POZ and MATH domain 2 (BPM2); CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 1 (TAIR:AT5G19000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37198 : 101.0) no description available & (gnl|cdd|58100 : 95.5) no description available & (reliability: 1200.0) & (original description: Putative BPM2, Description = BTB/POZ and MATH domain-containing protein 2, PFAM = PF00651)' T '29.5.11.4.5.2' 'protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ' 'niben101scf05574_261752-271128' '(at2g39760 : 466.0) BPM3; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 1 (TAIR:AT5G19000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84929 : 96.9) no description available & (gnl|cdd|39642 : 93.1) no description available & (reliability: 932.0) & (original description: Putative BPM1, Description = BTB/POZ and MATH domain-containing protein 3, PFAM = PF00651)' T '29.5.11.4.5.2' 'protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ' 'niben101scf05574_261810-272648' '(at2g39760 : 284.0) BPM3; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 1 (TAIR:AT5G19000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39642 : 101.0) no description available & (gnl|cdd|84929 : 94.2) no description available & (reliability: 568.0) & (original description: Putative BPM1, Description = BTB/POZ and MATH domain-containing protein 3, PFAM = PF00651)' T '29.5.11.4.5.2' 'protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ' 'niben101scf07018_170307-177573' '(at2g39760 : 528.0) BPM3; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 1 (TAIR:AT5G19000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58100 : 95.1) no description available & (gnl|cdd|39642 : 90.0) no description available & (reliability: 1056.0) & (original description: Putative BPM3, Description = BTB/POZ and MATH domain-containing protein 3, PFAM = PF00651)' T '29.5.11.4.5.2' 'protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ' 'niben101scf08544_264142-270583' '(at5g63160 : 375.0) BTB and TAZ domain protein. Short-lived nuclear-cytoplasmic protein targeted for degradation by the 26S proteosome pathway. Acts redundantly with BT2 and BT3 during female gametophyte development.; BTB and TAZ domain protein 1 (BT1); CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 2 (TAIR:AT3G48360.1); Has 1462 Blast hits to 1460 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 839; Fungi - 0; Plants - 555; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|36989 : 207.0) no description available & (reliability: 750.0) & (original description: Putative BT1, Description = BTB/POZ and TAZ domain-containing protein 1, PFAM = PF02135;PF00651)' T '29.5.11.4.5.2' 'protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ' 'niben101scf09987_11579-18806' '(at2g39760 : 479.0) BPM3; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 1 (TAIR:AT5G19000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39642 : 100.0) no description available & (gnl|cdd|84929 : 93.8) no description available & (reliability: 958.0) & (original description: Putative BPM3, Description = BTB/POZ and MATH domain-containing protein 3, PFAM = PF00651)' T '29.5.11.4.6' 'protein.degradation.ubiquitin.E3.DCX' 'nbv0.3scaffold19365_26894-50368' '(at4g05420 : 1987.0) Structurally similar to damaged DNA binding proteins.DDB1a is part of a 350 KDa nuclear localized DET1 protein complex. This complex may physically interact with histone tails and while bound to chromatin- repress transcription of genes involved in photomorphogenesis.; damaged DNA binding protein 1A (DDB1A); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: negative regulation of transcription, negative regulation of photomorphogenesis; LOCATED IN: nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: damaged DNA binding protein 1B (TAIR:AT4G21100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37108 : 1483.0) no description available & (gnl|cdd|66828 : 337.0) no description available & (q7xwp1|cpsf1_orysa : 81.3) Probable cleavage and polyadenylation specificity factor 160 kDa subunit (CPSF 160 kDa subunit) - Oryza sativa (Rice) & (reliability: 3974.0) & (original description: Putative DDB1, Description = DNA damage-binding protein 1, PFAM = PF10433;PF03178)' T '29.5.11.4.6' 'protein.degradation.ubiquitin.E3.DCX' 'nbv0.5scaffold802_8622-30888' '(at4g05420 : 1999.0) Structurally similar to damaged DNA binding proteins.DDB1a is part of a 350 KDa nuclear localized DET1 protein complex. This complex may physically interact with histone tails and while bound to chromatin- repress transcription of genes involved in photomorphogenesis.; damaged DNA binding protein 1A (DDB1A); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: negative regulation of transcription, negative regulation of photomorphogenesis; LOCATED IN: nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: damaged DNA binding protein 1B (TAIR:AT4G21100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37108 : 1489.0) no description available & (gnl|cdd|66828 : 345.0) no description available & (q7xwp1|cpsf1_orysa : 88.6) Probable cleavage and polyadenylation specificity factor 160 kDa subunit (CPSF 160 kDa subunit) - Oryza sativa (Rice) & (reliability: 3998.0) & (original description: Putative DDB1, Description = DNA damage-binding protein 1, PFAM = PF10433;PF03178)' T '29.5.11.4.6' 'protein.degradation.ubiquitin.E3.DCX' 'niben101scf01281_1052864-1076536' '(at4g05420 : 1934.0) Structurally similar to damaged DNA binding proteins.DDB1a is part of a 350 KDa nuclear localized DET1 protein complex. This complex may physically interact with histone tails and while bound to chromatin- repress transcription of genes involved in photomorphogenesis.; damaged DNA binding protein 1A (DDB1A); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: negative regulation of transcription, negative regulation of photomorphogenesis; LOCATED IN: nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: damaged DNA binding protein 1B (TAIR:AT4G21100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37108 : 1441.0) no description available & (gnl|cdd|66828 : 343.0) no description available & (q7xwp1|cpsf1_orysa : 86.7) Probable cleavage and polyadenylation specificity factor 160 kDa subunit (CPSF 160 kDa subunit) - Oryza sativa (Rice) & (reliability: 3868.0) & (original description: Putative DDB1, Description = DNA damage-binding protein 1, PFAM = PF10433;PF03178)' T '29.5.11.4.99' 'protein.degradation.ubiquitin.E3.unspecified' 'nbv0.3scaffold2079_77176-83026' '(at3g45620 : 592.0) This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase; Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G35140.1). & (gnl|cdd|36548 : 474.0) no description available & (gnl|cdd|29257 : 121.0) no description available & (reliability: 1184.0) & (original description: Putative pc326, Description = Nucleotide binding protein, PFAM = PF00400;PF00400)' T '29.5.11.4.99' 'protein.degradation.ubiquitin.E3.unspecified' 'niben101scf02171_74043-80337' '(at3g45620 : 618.0) This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase; Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G35140.1). & (gnl|cdd|36548 : 490.0) no description available & (gnl|cdd|29257 : 120.0) no description available & (reliability: 1236.0) & (original description: Putative DCAF8, Description = DCAF8, PFAM = PF00400;PF00400)' T '29.5.11.4.99' 'protein.degradation.ubiquitin.E3.unspecified' 'niben101scf08679_49823-64666' '(at1g55250 : 723.0) Encodes one of two orthologous E3 ubiquitin ligases in Arabidopsis that are involved in monoubiquitination of histone H2B.; histone mono-ubiquitination 2 (HUB2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: histone mono-ubiquitination 1 (TAIR:AT2G44950.1). & (gnl|cdd|36196 : 296.0) no description available & (reliability: 1446.0) & (original description: Putative HUB2, Description = E3 ubiquitin-protein ligase BRE1-like 2, PFAM = PF13920)' T '29.5.11.4.99' 'protein.degradation.ubiquitin.E3.unspecified' 'niben101scf14634_174076-179620' '(at3g45620 : 589.0) This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase; Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G35140.1). & (gnl|cdd|36548 : 484.0) no description available & (gnl|cdd|29257 : 120.0) no description available & (reliability: 1178.0) & (original description: Putative pc326, Description = Nucleotide binding protein, PFAM = PF00400;PF00400)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'nbv0.3scaffold2747_4184-13666' '(gnl|cdd|73067 : 359.0) no description available & (at4g17895 : 336.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 20 (UBP20); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 21 (TAIR:AT5G46740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37076 : 333.0) no description available & (reliability: 672.0) & (original description: Putative Sb01g028253, Description = Putative uncharacterized protein Sb01g028253, PFAM = PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'nbv0.3scaffold2747_13563-22614' '(at4g17890 : 402.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ARF-GAP domain 8 (AGD8); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 9 (TAIR:AT5G46750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35925 : 340.0) no description available & (gnl|cdd|85433 : 141.0) no description available & (reliability: 804.0) & (original description: Putative AGD8, Description = Probable ADP-ribosylation factor GTPase-activating protein AGD8, PFAM = PF01412)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'nbv0.3scaffold7385_26771-37353' '(at5g57990 : 548.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 23 (UBP23); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 19 (TAIR:AT2G24640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73067 : 440.0) no description available & (gnl|cdd|37076 : 418.0) no description available & (reliability: 1096.0) & (original description: Putative UBP23, Description = Ubiquitin carboxyl-terminal hydrolase 23, PFAM = PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'nbv0.3scaffold13996_19572-41732' '(at5g06600 : 1757.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37074 : 828.0) no description available & (gnl|cdd|34681 : 629.0) no description available & (reliability: 3514.0) & (original description: Putative Sb03g035900, Description = Putative uncharacterized protein Sb03g035900, PFAM = PF14533;PF00443;PF00917;PF12436)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'nbv0.3scaffold14220_37151-41183' '(at4g39370 : 149.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 27 (UBP27); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 23 (TAIR:AT5G57990.1). & (gnl|cdd|37079 : 93.6) no description available & (gnl|cdd|84777 : 80.0) no description available & (reliability: 298.0) & (original description: Putative UBP27, Description = Ubiquitin carboxyl-terminal hydrolase 27, PFAM = PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'nbv0.3scaffold15405_21946-33717' '(at4g39910 : 628.0) Encodes a nuclear ubiquitin-specific protease.; ubiquitin-specific protease 3 (UBP3); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 4 (TAIR:AT2G22310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73069 : 450.0) no description available & (gnl|cdd|37075 : 364.0) no description available & (reliability: 1256.0) & (original description: Putative UBP4, Description = Ubiquitin carboxyl-terminal hydrolase 4, PFAM = PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'nbv0.3scaffold19782_12070-25749' '(at5g22030 : 988.0) ubiquitin-specific protease 8 (UBP8); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 5 (TAIR:AT2G40930.1); Has 10748 Blast hits to 7392 proteins in 262 species: Archae - 0; Bacteria - 6; Metazoa - 5718; Fungi - 1753; Plants - 1297; Viruses - 10; Other Eukaryotes - 1964 (source: NCBI BLink). & (gnl|cdd|37081 : 504.0) no description available & (gnl|cdd|35119 : 422.0) no description available & (reliability: 1976.0) & (original description: Putative UBP8, Description = Ubiquitin carboxyl-terminal hydrolase 8, PFAM = PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'nbv0.3scaffold21673_17397-28421' '(gnl|cdd|73067 : 356.0) no description available & (gnl|cdd|37076 : 333.0) no description available & (at4g17895 : 332.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 20 (UBP20); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 21 (TAIR:AT5G46740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 664.0) & (original description: Putative Sb01g028253, Description = Putative uncharacterized protein Sb01g028253, PFAM = PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'nbv0.3scaffold25945_1-8608' '(at1g04860 : 580.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 2 (UBP2); FUNCTIONS IN: ubiquitin-specific protease activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome complex, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, UBP-type (InterPro:IPR001607), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 1 (TAIR:AT2G32780.1); Has 10400 Blast hits to 6714 proteins in 274 species: Archae - 0; Bacteria - 50; Metazoa - 5279; Fungi - 1927; Plants - 1459; Viruses - 5; Other Eukaryotes - 1680 (source: NCBI BLink). & (gnl|cdd|37084 : 295.0) no description available & (gnl|cdd|73073 : 158.0) no description available & (reliability: 1160.0) & (original description: Putative UBP1, Description = UBIQUITIN-SPECIFIC PROTEASE 2 family protein, PFAM = PF02148;PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'nbv0.5scaffold346_242263-288890' '(at5g06600 : 1691.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37074 : 759.0) no description available & (gnl|cdd|34681 : 584.0) no description available & (reliability: 3382.0) & (original description: Putative USP7, Description = Ubiquitin carboxyl-terminal hydrolase 12, PFAM = PF00917;PF14533;PF12436;PF12436;PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'nbv0.5scaffold3749_58643-84376' '(at5g06600 : 1761.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37074 : 824.0) no description available & (gnl|cdd|34681 : 625.0) no description available & (reliability: 3522.0) & (original description: Putative UBP12, Description = Ubiquitin specific protease 12, PFAM = PF12436;PF14533;PF00443;PF00917)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'nbv0.5scaffold4398_60440-69832' '(gnl|cdd|73067 : 359.0) no description available & (at4g17895 : 336.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 20 (UBP20); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 21 (TAIR:AT5G46740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37076 : 334.0) no description available & (reliability: 672.0) & (original description: Putative Sb01g028253, Description = Putative uncharacterized protein Sb01g028253, PFAM = PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben044scf00001217ctg016_1-4911' '(at4g30890 : 449.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 24 (UBP24); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 15 (TAIR:AT1G17110.2). & (gnl|cdd|37082 : 191.0) no description available & (gnl|cdd|84777 : 191.0) no description available & (reliability: 898.0) & (original description: Putative UBP24, Description = Ubiquitin carboxyl-terminal hydrolase 24, PFAM = PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben044scf00005313ctg000_1012-4617' '(at3g14400 : 375.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 25 (UBP25); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 23 (TAIR:AT5G57990.1); Has 8659 Blast hits to 7314 proteins in 254 species: Archae - 0; Bacteria - 9; Metazoa - 4447; Fungi - 1449; Plants - 1041; Viruses - 9; Other Eukaryotes - 1704 (source: NCBI BLink). & (gnl|cdd|73067 : 306.0) no description available & (gnl|cdd|37076 : 248.0) no description available & (reliability: 750.0) & (original description: Putative ubp16, Description = Ubiquitin carboxyl-terminal hydrolase 36, PFAM = PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben044scf00005704ctg007_1-5336' '(at4g24560 : 283.0) Encodes a ubiquitin-specific protease. There is no evidence for a phenotype in ubp16-1 mutants, however, double mutant analysis with ubp15 mutants reveals a role for UBP16 in plant development and cell proliferation.; ubiquitin-specific protease 16 (UBP16); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity, zinc ion binding; INVOLVED IN: cell proliferation, flower development, shoot development, root development, leaf development; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 17 (TAIR:AT5G65450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37076 : 231.0) no description available & (gnl|cdd|73067 : 206.0) no description available & (reliability: 566.0) & (original description: Putative UBP15, Description = Ubiquitin carboxyl-terminal hydrolase 15, PFAM = PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben044scf00006836ctg000_5741-19320' '(at3g14400 : 182.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 25 (UBP25); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 23 (TAIR:AT5G57990.1); Has 8659 Blast hits to 7314 proteins in 254 species: Archae - 0; Bacteria - 9; Metazoa - 4447; Fungi - 1449; Plants - 1041; Viruses - 9; Other Eukaryotes - 1704 (source: NCBI BLink). & (gnl|cdd|73067 : 100.0) no description available & (reliability: 364.0) & (original description: Putative glysoja_011370, Description = Ubiquitin carboxyl-terminal hydrolase 25, PFAM = PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben044scf00009855ctg008_1-9397' '(at5g57990 : 505.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 23 (UBP23); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 19 (TAIR:AT2G24640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73067 : 439.0) no description available & (gnl|cdd|37076 : 418.0) no description available & (reliability: 1010.0) & (original description: Putative USP17L6P, Description = Ubiquitin carboxyl-terminal hydrolase 17-like protein 6, PFAM = PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben044scf00011814ctg009_1-1364' '(at5g06600 : 133.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative UBP12, Description = Ubiquitin carboxyl-terminal hydrolase 12, PFAM = )' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben044scf00012989ctg044_2213-9088' '(at5g06600 : 724.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37074 : 388.0) no description available & (gnl|cdd|34681 : 363.0) no description available & (reliability: 1448.0) & (original description: Putative usp7, Description = Ubiquitin carboxyl-terminal hydrolase 12, PFAM = PF00917;PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben044scf00017071ctg008_17005-21507' '(at5g10790 : 553.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 22 (UBP22); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity, zinc ion binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, UBP-type (InterPro:IPR001607), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 23 (TAIR:AT5G57990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73066 : 380.0) no description available & (gnl|cdd|37078 : 330.0) no description available & (reliability: 1106.0) & (original description: Putative UBP22, Description = Ubiquitin carboxyl-terminal hydrolase 22, PFAM = PF02148;PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben044scf00017309ctg009_30426-45047' '(at2g40930 : 1215.0) Encodes ubiquitin-specific protease with nuclear localization signals that is likely to be involved in ubiquitin-mediated protein degradation.; ubiquitin-specific protease 5 (UBP5); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin-specific peptidase, DUSP domain (InterPro:IPR006615), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 9 (TAIR:AT4G10570.1); Has 10784 Blast hits to 7330 proteins in 261 species: Archae - 0; Bacteria - 2; Metazoa - 5578; Fungi - 1854; Plants - 1330; Viruses - 10; Other Eukaryotes - 2010 (source: NCBI BLink). & (gnl|cdd|37081 : 630.0) no description available & (gnl|cdd|35119 : 264.0) no description available & (reliability: 2430.0) & (original description: Putative UBP5, Description = Ubiquitin carboxyl-terminal hydrolase 5, PFAM = PF00443;PF06337)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben044scf00023009ctg025_12135-31349' '(at3g49600 : 1216.0) Encodes a ubiquitin-specific protease which catalyzes deubiquitination of histone H2B and is required for heterochromatin silencing.Loss of function mutations display autonomous endosperm development and embryo arrest. Loss of function also results in an increase in expression of the PcG complex target gene PHE1.; ubiquitin-specific protease 26 (UBP26); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: seed development; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin-specific peptidase, DUSP domain (InterPro:IPR006615), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 7210 Blast hits to 6677 proteins in 263 species: Archae - 0; Bacteria - 2; Metazoa - 3696; Fungi - 1305; Plants - 848; Viruses - 3; Other Eukaryotes - 1356 (source: NCBI BLink). & (gnl|cdd|37074 : 372.0) no description available & (gnl|cdd|73074 : 357.0) no description available & (reliability: 2432.0) & (original description: Putative UBP26, Description = Ubiquitin carboxyl-terminal hydrolase 26, PFAM = PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben044scf00024148ctg008_76-4859' '(at1g04860 : 501.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 2 (UBP2); FUNCTIONS IN: ubiquitin-specific protease activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome complex, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, UBP-type (InterPro:IPR001607), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 1 (TAIR:AT2G32780.1); Has 10400 Blast hits to 6714 proteins in 274 species: Archae - 0; Bacteria - 50; Metazoa - 5279; Fungi - 1927; Plants - 1459; Viruses - 5; Other Eukaryotes - 1680 (source: NCBI BLink). & (gnl|cdd|37084 : 288.0) no description available & (gnl|cdd|73073 : 147.0) no description available & (reliability: 1002.0) & (original description: Putative UBP1, Description = UBIQUITIN-SPECIFIC PROTEASE 2 family protein, PFAM = PF02148;PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben044scf00024595ctg005_1-2580' '(at4g30890 : 147.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 24 (UBP24); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 15 (TAIR:AT1G17110.2). & (gnl|cdd|84777 : 105.0) no description available & (gnl|cdd|37076 : 88.2) no description available & (reliability: 294.0) & (original description: Putative UBP24, Description = Ubiquitin carboxyl-terminal hydrolase 24, PFAM = PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben044scf00031171ctg001_1-7347' '(at4g30890 : 452.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 24 (UBP24); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 15 (TAIR:AT1G17110.2). & (gnl|cdd|84777 : 191.0) no description available & (gnl|cdd|37082 : 190.0) no description available & (reliability: 904.0) & (original description: Putative UBP24, Description = Ubiquitin carboxyl-terminal hydrolase 24, PFAM = PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf00052_854909-878696' '(at4g39910 : 640.0) Encodes a nuclear ubiquitin-specific protease.; ubiquitin-specific protease 3 (UBP3); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 4 (TAIR:AT2G22310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73069 : 458.0) no description available & (gnl|cdd|37075 : 372.0) no description available & (reliability: 1280.0) & (original description: Putative UBP4, Description = Ubiquitin carboxyl-terminal hydrolase 4, PFAM = PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf00207_646854-666109' '(at3g11910 : 787.0) ubiquitin-specific protease 13 (UBP13); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 12 (TAIR:AT5G06600.2). & (gnl|cdd|37074 : 307.0) no description available & (gnl|cdd|34681 : 127.0) no description available & (reliability: 1556.0) & (original description: Putative USP7, Description = Ubiquitin carboxyl-terminal hydrolase 12, PFAM = PF14533;PF12436)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf00293_238799-248021' '(at4g30890 : 439.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 24 (UBP24); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 15 (TAIR:AT1G17110.2). & (gnl|cdd|37082 : 202.0) no description available & (gnl|cdd|84777 : 200.0) no description available & (reliability: 878.0) & (original description: Putative UBP24, Description = Ubiquitin carboxyl-terminal hydrolase 24, PFAM = PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf00774_259757-270339' '(at5g57990 : 547.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 23 (UBP23); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 19 (TAIR:AT2G24640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73067 : 441.0) no description available & (gnl|cdd|37076 : 419.0) no description available & (reliability: 1094.0) & (original description: Putative UBP23, Description = Ubiquitin carboxyl-terminal hydrolase 23, PFAM = PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf00897_258854-274420' '(at3g14400 : 565.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 25 (UBP25); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 23 (TAIR:AT5G57990.1); Has 8659 Blast hits to 7314 proteins in 254 species: Archae - 0; Bacteria - 9; Metazoa - 4447; Fungi - 1449; Plants - 1041; Viruses - 9; Other Eukaryotes - 1704 (source: NCBI BLink). & (gnl|cdd|73067 : 410.0) no description available & (gnl|cdd|37076 : 312.0) no description available & (reliability: 1130.0) & (original description: Putative UBP25, Description = Ubiquitin carboxyl-terminal hydrolase 25, PFAM = PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf01171_590273-596030' '(at1g04860 : 605.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 2 (UBP2); FUNCTIONS IN: ubiquitin-specific protease activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome complex, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, UBP-type (InterPro:IPR001607), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 1 (TAIR:AT2G32780.1); Has 10400 Blast hits to 6714 proteins in 274 species: Archae - 0; Bacteria - 50; Metazoa - 5279; Fungi - 1927; Plants - 1459; Viruses - 5; Other Eukaryotes - 1680 (source: NCBI BLink). & (gnl|cdd|37084 : 291.0) no description available & (gnl|cdd|73073 : 158.0) no description available & (reliability: 1210.0) & (original description: Putative UBP1, Description = UBIQUITIN-SPECIFIC PROTEASE 2 family protein, PFAM = PF00443;PF02148)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf01279_94655-98953' '(at5g10790 : 558.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 22 (UBP22); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity, zinc ion binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, UBP-type (InterPro:IPR001607), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 23 (TAIR:AT5G57990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73066 : 380.0) no description available & (gnl|cdd|37078 : 329.0) no description available & (reliability: 1116.0) & (original description: Putative UBP22, Description = Ubiquitin carboxyl-terminal hydrolase 22, PFAM = PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf01304_581610-593997' '(at1g51710 : 687.0) Ubiquitin-specific protease 6 (UBP6). Deubiquinating enzyme. Interacts with calmodulin.; ubiquitin-specific protease 6 (UBP6); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 7 (TAIR:AT3G21280.1); Has 4803 Blast hits to 4486 proteins in 237 species: Archae - 0; Bacteria - 0; Metazoa - 2534; Fungi - 849; Plants - 654; Viruses - 2; Other Eukaryotes - 764 (source: NCBI BLink). & (gnl|cdd|37083 : 517.0) no description available & (gnl|cdd|73063 : 306.0) no description available & (reliability: 1374.0) & (original description: Putative UBP6, Description = Ubiquitin carboxyl-terminal hydrolase 6, PFAM = PF00443;PF00240)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf01566_75666-93056' '(at1g17110 : 671.0) Encodes a ubiquitin-specific protease, and its activity has been confirmed in an in vitro assay. ubp15 mutants have defects in cell proliferation, and the associated processes of leaf, root, stem, flower, and silique development. UBP15 can be found in the nucleus and cytoplasm in transient assays. Though UBP15 is expressed in many tissues, UBP15 transcript levels are higher in rosette leaves and inflorescences than in other parts of the plant.; ubiquitin-specific protease 15 (UBP15); CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 18 (TAIR:AT4G31670.1). & (gnl|cdd|37076 : 420.0) no description available & (gnl|cdd|73067 : 420.0) no description available & (reliability: 1342.0) & (original description: Putative UBP15, Description = Ubiquitin carboxyl-terminal hydrolase 15, PFAM = PF00443;PF01753)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf01683_373801-385636' '(at4g39370 : 312.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 27 (UBP27); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 23 (TAIR:AT5G57990.1). & (gnl|cdd|37079 : 113.0) no description available & (gnl|cdd|84777 : 103.0) no description available & (reliability: 624.0) & (original description: Putative UBP27, Description = Ubiquitin carboxyl-terminal hydrolase 27, PFAM = PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf02098_234900-249032' '(at2g40930 : 1206.0) Encodes ubiquitin-specific protease with nuclear localization signals that is likely to be involved in ubiquitin-mediated protein degradation.; ubiquitin-specific protease 5 (UBP5); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin-specific peptidase, DUSP domain (InterPro:IPR006615), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 9 (TAIR:AT4G10570.1); Has 10784 Blast hits to 7330 proteins in 261 species: Archae - 0; Bacteria - 2; Metazoa - 5578; Fungi - 1854; Plants - 1330; Viruses - 10; Other Eukaryotes - 2010 (source: NCBI BLink). & (gnl|cdd|37081 : 621.0) no description available & (gnl|cdd|35119 : 265.0) no description available & (reliability: 2412.0) & (original description: Putative UBP5, Description = Ubiquitin carboxyl-terminal hydrolase 5, PFAM = PF00443;PF06337)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf02605_281976-297399' '(at3g20630 : 1229.0) Encodes a ubiquitin-specific protease. Identical to TTN6. Loss of function mutations are embryo lethals, having development arrested at the preglobular/globular stage. Also involved in root responses to phosphate deficiency.; ubiquitin-specific protease 14 (UBP14); CONTAINS InterPro DOMAIN/s: Zinc finger, UBP-type (InterPro:IPR001607), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), UBA-like (InterPro:IPR009060), Ubiquitinyl hydrolase (InterPro:IPR016652); Has 2045 Blast hits to 1942 proteins in 227 species: Archae - 0; Bacteria - 2; Metazoa - 1042; Fungi - 463; Plants - 217; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink). & (gnl|cdd|36162 : 748.0) no description available & (gnl|cdd|34804 : 354.0) no description available & (reliability: 2458.0) & (original description: Putative UBP14, Description = Ubiquitin carboxyl-terminal hydrolase 14, PFAM = PF00627;PF00627;PF00443;PF02148)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf02725_598863-608019' '(at1g17110 : 670.0) Encodes a ubiquitin-specific protease, and its activity has been confirmed in an in vitro assay. ubp15 mutants have defects in cell proliferation, and the associated processes of leaf, root, stem, flower, and silique development. UBP15 can be found in the nucleus and cytoplasm in transient assays. Though UBP15 is expressed in many tissues, UBP15 transcript levels are higher in rosette leaves and inflorescences than in other parts of the plant.; ubiquitin-specific protease 15 (UBP15); CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 18 (TAIR:AT4G31670.1). & (gnl|cdd|73067 : 421.0) no description available & (gnl|cdd|37076 : 418.0) no description available & (reliability: 1340.0) & (original description: Putative UBP15, Description = Ubiquitin carboxyl-terminal hydrolase 15, PFAM = PF01753;PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf03410_371680-393947' '(at3g49600 : 1220.0) Encodes a ubiquitin-specific protease which catalyzes deubiquitination of histone H2B and is required for heterochromatin silencing.Loss of function mutations display autonomous endosperm development and embryo arrest. Loss of function also results in an increase in expression of the PcG complex target gene PHE1.; ubiquitin-specific protease 26 (UBP26); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: seed development; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin-specific peptidase, DUSP domain (InterPro:IPR006615), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 7210 Blast hits to 6677 proteins in 263 species: Archae - 0; Bacteria - 2; Metazoa - 3696; Fungi - 1305; Plants - 848; Viruses - 3; Other Eukaryotes - 1356 (source: NCBI BLink). & (gnl|cdd|37074 : 370.0) no description available & (gnl|cdd|73074 : 360.0) no description available & (reliability: 2440.0) & (original description: Putative UBP26, Description = Ubiquitin carboxyl-terminal hydrolase 26, PFAM = PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf03670_328021-340982' '(at4g24560 : 456.0) Encodes a ubiquitin-specific protease. There is no evidence for a phenotype in ubp16-1 mutants, however, double mutant analysis with ubp15 mutants reveals a role for UBP16 in plant development and cell proliferation.; ubiquitin-specific protease 16 (UBP16); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity, zinc ion binding; INVOLVED IN: cell proliferation, flower development, shoot development, root development, leaf development; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 17 (TAIR:AT5G65450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37076 : 398.0) no description available & (gnl|cdd|73067 : 366.0) no description available & (reliability: 912.0) & (original description: Putative UBP15, Description = Ubiquitin carboxyl-terminal hydrolase 17, PFAM = PF00443;PF01753)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf04418_1462851-1475075' '(at2g40930 : 1216.0) Encodes ubiquitin-specific protease with nuclear localization signals that is likely to be involved in ubiquitin-mediated protein degradation.; ubiquitin-specific protease 5 (UBP5); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin-specific peptidase, DUSP domain (InterPro:IPR006615), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 9 (TAIR:AT4G10570.1); Has 10784 Blast hits to 7330 proteins in 261 species: Archae - 0; Bacteria - 2; Metazoa - 5578; Fungi - 1854; Plants - 1330; Viruses - 10; Other Eukaryotes - 2010 (source: NCBI BLink). & (gnl|cdd|37081 : 630.0) no description available & (gnl|cdd|35119 : 254.0) no description available & (reliability: 2432.0) & (original description: Putative UBP5, Description = Ubiquitin carboxyl-terminal hydrolase 5, PFAM = PF06337;PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf05079_68820-79153' '(at5g57990 : 493.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 23 (UBP23); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 19 (TAIR:AT2G24640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73067 : 438.0) no description available & (gnl|cdd|37076 : 416.0) no description available & (reliability: 986.0) & (original description: Putative USP17L6P, Description = Ubiquitin carboxyl-terminal hydrolase 17-like protein 6, PFAM = PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf07463_109741-133534' '(at5g06600 : 1798.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37074 : 837.0) no description available & (gnl|cdd|34681 : 638.0) no description available & (reliability: 3596.0) & (original description: Putative UBP13, Description = Ubiquitin carboxyl-terminal hydrolase 13, PFAM = PF14533;PF12436;PF00443;PF00917)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf07773_38219-44201' '(at4g39910 : 630.0) Encodes a nuclear ubiquitin-specific protease.; ubiquitin-specific protease 3 (UBP3); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 4 (TAIR:AT2G22310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73069 : 452.0) no description available & (gnl|cdd|37075 : 361.0) no description available & (reliability: 1260.0) & (original description: Putative UBP4, Description = Ubiquitin carboxyl-terminal hydrolase 4, PFAM = PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf08443_85828-110238' '(at3g20630 : 1211.0) Encodes a ubiquitin-specific protease. Identical to TTN6. Loss of function mutations are embryo lethals, having development arrested at the preglobular/globular stage. Also involved in root responses to phosphate deficiency.; ubiquitin-specific protease 14 (UBP14); CONTAINS InterPro DOMAIN/s: Zinc finger, UBP-type (InterPro:IPR001607), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), UBA-like (InterPro:IPR009060), Ubiquitinyl hydrolase (InterPro:IPR016652); Has 2045 Blast hits to 1942 proteins in 227 species: Archae - 0; Bacteria - 2; Metazoa - 1042; Fungi - 463; Plants - 217; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink). & (gnl|cdd|36162 : 754.0) no description available & (gnl|cdd|34804 : 349.0) no description available & (reliability: 2422.0) & (original description: Putative UBP14, Description = Ubiquitin carboxyl-terminal hydrolase 14, PFAM = PF02148;PF00443;PF00627;PF00627)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf08478_640529-649246' '(at1g04860 : 555.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 2 (UBP2); FUNCTIONS IN: ubiquitin-specific protease activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome complex, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, UBP-type (InterPro:IPR001607), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 1 (TAIR:AT2G32780.1); Has 10400 Blast hits to 6714 proteins in 274 species: Archae - 0; Bacteria - 50; Metazoa - 5279; Fungi - 1927; Plants - 1459; Viruses - 5; Other Eukaryotes - 1680 (source: NCBI BLink). & (gnl|cdd|37084 : 396.0) no description available & (gnl|cdd|73073 : 158.0) no description available & (reliability: 1110.0) & (original description: Putative UBP1, Description = UBIQUITIN-SPECIFIC PROTEASE 2 family protein, PFAM = PF00443;PF02148)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf08672_106257-112427' '(gnl|cdd|73067 : 338.0) no description available & (at4g17895 : 329.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 20 (UBP20); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 21 (TAIR:AT5G46740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37076 : 321.0) no description available & (reliability: 658.0) & (original description: Putative Sb01g028253, Description = Putative uncharacterized protein Sb01g028253, PFAM = PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf09610_130073-181884' '(at5g06600 : 1618.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37074 : 701.0) no description available & (gnl|cdd|34681 : 519.0) no description available & (reliability: 3236.0) & (original description: Putative USP7, Description = Ubiquitin carboxyl-terminal hydrolase 12, PFAM = PF14533;PF12436;PF12436;PF00917;PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf09854_170743-296369' '(at5g06600 : 306.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37074 : 159.0) no description available & (gnl|cdd|58100 : 123.0) no description available & (reliability: 612.0) & (original description: Putative USP7, Description = Ubiquitin carboxyl-terminal hydrolase 12, PFAM = PF12436;PF00917)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf10920_178894-194331' '(at5g06600 : 1078.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37074 : 553.0) no description available & (gnl|cdd|34681 : 530.0) no description available & (reliability: 2156.0) & (original description: Putative usp7, Description = Ubiquitin carboxyl-terminal hydrolase 12, PFAM = PF00443;PF00917)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf11253_525705-535780' '(at5g46750 : 402.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ARF-GAP domain 9 (AGD9); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 8 (TAIR:AT4G17890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35925 : 339.0) no description available & (gnl|cdd|85433 : 147.0) no description available & (reliability: 800.0) & (original description: Putative AGD9, Description = Probable ADP-ribosylation factor GTPase-activating protein AGD9, PFAM = PF01412)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf11953_16237-36449' '(at5g06600 : 1733.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37074 : 821.0) no description available & (gnl|cdd|34681 : 624.0) no description available & (reliability: 3466.0) & (original description: Putative UBP12, Description = Ubiquitin specific protease 12, PFAM = PF12436;PF00443;PF14533;PF00917)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf12320_332948-340883' '(at4g30890 : 448.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 24 (UBP24); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 15 (TAIR:AT1G17110.2). & (gnl|cdd|84777 : 191.0) no description available & (gnl|cdd|37082 : 190.0) no description available & (reliability: 896.0) & (original description: Putative UBP24, Description = Ubiquitin carboxyl-terminal hydrolase 24, PFAM = PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf14872_81590-94614' '(at4g17890 : 435.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ARF-GAP domain 8 (AGD8); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 9 (TAIR:AT5G46750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35925 : 337.0) no description available & (gnl|cdd|85433 : 143.0) no description available & (reliability: 870.0) & (original description: Putative AGD8, Description = Probable ADP-ribosylation factor GTPase-activating protein AGD8, PFAM = PF01412)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf17430_75993-94818' '(at3g20630 : 1217.0) Encodes a ubiquitin-specific protease. Identical to TTN6. Loss of function mutations are embryo lethals, having development arrested at the preglobular/globular stage. Also involved in root responses to phosphate deficiency.; ubiquitin-specific protease 14 (UBP14); CONTAINS InterPro DOMAIN/s: Zinc finger, UBP-type (InterPro:IPR001607), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), UBA-like (InterPro:IPR009060), Ubiquitinyl hydrolase (InterPro:IPR016652); Has 2045 Blast hits to 1942 proteins in 227 species: Archae - 0; Bacteria - 2; Metazoa - 1042; Fungi - 463; Plants - 217; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink). & (gnl|cdd|36162 : 738.0) no description available & (gnl|cdd|34804 : 345.0) no description available & (reliability: 2434.0) & (original description: Putative Usp5, Description = RE70722p, PFAM = PF00627;PF00627;PF02148;PF00443)' T '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'niben101scf18484_57611-77782' '(at5g22030 : 1010.0) ubiquitin-specific protease 8 (UBP8); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 5 (TAIR:AT2G40930.1); Has 10748 Blast hits to 7392 proteins in 262 species: Archae - 0; Bacteria - 6; Metazoa - 5718; Fungi - 1753; Plants - 1297; Viruses - 10; Other Eukaryotes - 1964 (source: NCBI BLink). & (gnl|cdd|37081 : 515.0) no description available & (gnl|cdd|35119 : 424.0) no description available & (reliability: 2020.0) & (original description: Putative UBP8, Description = Ubiquitin carboxyl-terminal hydrolase 8, PFAM = PF00443)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'nbv0.3scaffold1843_19170-26587' '(at1g21720 : 387.0) 20S proteasome beta subunit PBC1 truncated protein (PBC1); proteasome beta subunit C1 (PBC1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit C2 (TAIR:AT1G77440.2); Has 3309 Blast hits to 3309 proteins in 436 species: Archae - 498; Bacteria - 34; Metazoa - 1257; Fungi - 828; Plants - 282; Viruses - 0; Other Eukaryotes - 410 (source: NCBI BLink). & (q9lst7|psb3_orysa : 369.0) Proteasome subunit beta type 3 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit beta-3) - Oryza sativa (Rice) & (gnl|cdd|35401 : 348.0) no description available & (gnl|cdd|48457 : 323.0) no description available & (reliability: 774.0) & (original description: Putative PBC1, Description = Proteasome subunit beta type-3-A, PFAM = PF00227;PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'nbv0.3scaffold2361_67668-75264' '(at1g79210 : 417.0) N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; FUNCTIONS IN: endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: defense response to bacterium, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: proteasome subunit PAB1 (TAIR:AT1G16470.2); Has 6770 Blast hits to 6769 proteins in 496 species: Archae - 887; Bacteria - 41; Metazoa - 2415; Fungi - 1555; Plants - 857; Viruses - 0; Other Eukaryotes - 1015 (source: NCBI BLink). & (q9lsu2|psa2_orysa : 406.0) Proteasome subunit alpha type 2 (EC 3.4.25.1) (20S proteasome alpha subunit B) (20S proteasome subunit alpha-2) - Oryza sativa (Rice) & (gnl|cdd|48448 : 398.0) no description available & (gnl|cdd|35402 : 368.0) no description available & (reliability: 834.0) & (original description: Putative pre8, Description = Probable proteasome subunit alpha type-2, PFAM = PF10584;PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'nbv0.3scaffold5094_11191-18804' '(at3g53970 : 192.0) proteasome inhibitor-related; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome Inhibitor PI31 (InterPro:IPR021625); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39958 : 178.0) no description available & (reliability: 384.0) & (original description: Putative At1g48530, Description = Putative proteasome inhibitor, PFAM = PF11566;PF08577)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'nbv0.3scaffold10570_42652-45479' '(at5g19990 : 142.0) 26S proteasome AAA-ATPase subunit; regulatory particle triple-A ATPase 6A (RPT6A); FUNCTIONS IN: ATPase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT5G20000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35947 : 117.0) no description available & (reliability: 284.0) & (original description: Putative let1, Description = 26S protease regulatory subunit 8, PFAM = )' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'nbv0.3scaffold14985_17833-26394' '(at2g19560 : 586.0) encodes a protein with a PAM domain involved in ethylene signaling. eer5 mutants show ethylene hypersensitivity in relation to hypocotyl elongation. EER5 interacts with EIN2 and with COP9 in Y2H assays. EIN3 protein levels are the same in WT and eer5-1 mutants. EER5 may be involved in promoting a dampening of the ethylene response.; ENHANCED ETHYLENE RESPONSE 5 (EER5); CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143); Has 771 Blast hits to 770 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 260; Fungi - 323; Plants - 58; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (gnl|cdd|37899 : 212.0) no description available & (gnl|cdd|35159 : 142.0) no description available & (reliability: 1172.0) & (original description: Putative EER5, Description = Enhanced ethylene response protein 5, PFAM = PF01399)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'nbv0.3scaffold21472_4676-10302' '(at5g15610 : 528.0) Proteasome component (PCI) domain protein; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: Proteasome component (PCI) domain protein (TAIR:AT3G02200.2); Has 694 Blast hits to 694 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 312; Fungi - 189; Plants - 98; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|37964 : 353.0) no description available & (reliability: 1056.0) & (original description: Putative At5g15610, Description = Eukaryotic translation initiation factor 3 subunit M, PFAM = PF01399)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'nbv0.3scaffold39342_4393-10710' '(q9m4t8|psa5_soybn : 450.0) Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S proteasome alpha subunit E) (20S proteasome subunit alpha-5) - Glycine max (Soybean) & (at1g53850 : 445.0) Encodes alpha5 subunit of 20s proteosome involved in protein degradation.; 20S proteasome alpha subunit E1 (PAE1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit E2 (TAIR:AT3G14290.1); Has 7954 Blast hits to 7950 proteins in 569 species: Archae - 901; Bacteria - 213; Metazoa - 2759; Fungi - 1863; Plants - 1012; Viruses - 0; Other Eukaryotes - 1206 (source: NCBI BLink). & (gnl|cdd|35397 : 396.0) no description available & (gnl|cdd|48451 : 382.0) no description available & (reliability: 890.0) & (original description: Putative PAE1, Description = Proteasome subunit alpha type-5-A, PFAM = PF10584;PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'nbv0.3scaffold54150_1-7566' '(at1g64520 : 396.0) regulatory particle non-ATPase 12A (RPN12a); FUNCTIONS IN: peptidase activity; INVOLVED IN: in 14 processes; LOCATED IN: proteasome complex, nucleus, proteasome regulatory particle, lid subcomplex, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 26S proteasome non-ATPase regulatory subunit Rpn12 (InterPro:IPR006746), SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); BEST Arabidopsis thaliana protein match is: regulatory particle non-ATPase 12B (TAIR:AT5G42040.1); Has 474 Blast hits to 474 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 195; Fungi - 129; Plants - 70; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|38361 : 314.0) no description available & (gnl|cdd|67037 : 111.0) no description available & (reliability: 792.0) & (original description: Putative RPN12A, Description = 26S proteasome non-ATPase regulatory subunit 8 homolog A, PFAM = PF10075)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'nbv0.3scaffold58735_4509-8005' '(at1g53750 : 167.0) 26S proteasome AAA-ATPase subunit RPT1a (RPT1a) mRNA,; regulatory particle triple-A 1A (RPT1A); FUNCTIONS IN: ATPase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: peptidyl-prolyl cis-trans isomerases;hydrolases;nucleoside-triphosphatases;ATP binding;nucleotide binding;ATPases (TAIR:AT1G53780.2); Has 30646 Blast hits to 28391 proteins in 3108 species: Archae - 1452; Bacteria - 10350; Metazoa - 4866; Fungi - 3564; Plants - 3128; Viruses - 30; Other Eukaryotes - 7256 (source: NCBI BLink). & (q9fxt9|prs7_orysa : 167.0) 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) - Oryza sativa (Rice) & (gnl|cdd|35948 : 157.0) no description available & (reliability: 334.0) & (original description: Putative mss1, Description = 26S protease regulatory subunit 7, PFAM = )' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'nbv0.3scaffold67549_2799-8016' '(at5g42790 : 417.0) encodes a protein with extensive homology to the largest subunit of the multicatalytic proteinase complex (proteasome). Negatively regulates thiol biosynthesis and arsenic tolerance.; proteasome alpha subunit F1 (PAF1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to arsenic, protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit F2 (TAIR:AT1G47250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36081 : 373.0) no description available & (p52428|psa1_orysa : 360.0) Proteasome subunit alpha type 1 (EC 3.4.25.1) (20S proteasome alpha subunit F) (20S proteasome subunit alpha-6) (Proteasome component C2) - Oryza sativa (Rice) & (gnl|cdd|48447 : 355.0) no description available & (reliability: 834.0) & (original description: Putative PAF1, Description = Proteasome subunit alpha type-1-A, PFAM = PF10584;PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'nbv0.5scaffold499_389984-397047' '(o24362|psa3_spiol : 311.0) Proteasome subunit alpha type 3 (EC 3.4.25.1) (20S proteasome alpha subunit G) (20S proteasome subunit alpha-7) (Proteasome component C8) - Spinacia oleracea (Spinach) & (at2g27020 : 302.0) Encodes 20S proteasome alpha 7 subunit PAG1.; 20S proteasome alpha subunit G1 (PAG1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, response to cold, ubiquitin-dependent protein catabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit E2 (TAIR:AT3G14290.1); Has 5862 Blast hits to 5858 proteins in 463 species: Archae - 870; Bacteria - 9; Metazoa - 1980; Fungi - 1345; Plants - 774; Viruses - 0; Other Eukaryotes - 884 (source: NCBI BLink). & (gnl|cdd|35405 : 272.0) no description available & (gnl|cdd|48449 : 250.0) no description available & (reliability: 604.0) & (original description: Putative pros, Description = Proteasome subunit alpha type, PFAM = PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'nbv0.5scaffold624_121499-144529' '(p54778|prs6b_soltu : 738.0) 26S protease regulatory subunit 6B homolog - Solanum tuberosum (Potato) & (at5g58290 : 719.0) 26S proteasome AAA-ATPase subunit RPT3 (RPT3) mRNA,; regulatory particle triple-A ATPase 3 (RPT3); FUNCTIONS IN: ATPase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, cell wall, nucleus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: regulatory particle AAA-ATPase 2A (TAIR:AT4G29040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35946 : 704.0) no description available & (gnl|cdd|31415 : 523.0) no description available & (reliability: 1438.0) & (original description: Putative RPT3, Description = 26S protease regulatory subunit 6B homolog, PFAM = PF00004)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'nbv0.5scaffold1313_50282-55626' '(at5g57950 : 267.0) 26S proteasome regulatory subunit, putative; CONTAINS InterPro DOMAIN/s: PDZ/DHR/GLGF (InterPro:IPR001478); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38339 : 191.0) no description available & (reliability: 534.0) & (original description: Putative At5g57950, Description = 26S proteasome non-ATPase regulatory subunit 9, PFAM = PF13180)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'nbv0.5scaffold1379_373756-383245' '(at2g32730 : 1412.0) 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit; FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cytosol, proteasome regulatory particle, base subcomplex, proteasome complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015), Armadillo-type fold (InterPro:IPR016024), 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (InterPro:IPR016642); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (TAIR:AT1G04810.1); Has 1219 Blast hits to 1116 proteins in 309 species: Archae - 13; Bacteria - 56; Metazoa - 400; Fungi - 388; Plants - 137; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|37273 : 1238.0) no description available & (gnl|cdd|34718 : 795.0) no description available & (reliability: 2824.0) & (original description: Putative RPN2B, Description = 26S proteasome non-ATPase regulatory subunit 1 homolog B, PFAM = PF13646;PF01851)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'nbv0.5scaffold2330_303923-312001' '(p54778|prs6b_soltu : 763.0) 26S protease regulatory subunit 6B homolog - Solanum tuberosum (Potato) & (at5g58290 : 718.0) 26S proteasome AAA-ATPase subunit RPT3 (RPT3) mRNA,; regulatory particle triple-A ATPase 3 (RPT3); FUNCTIONS IN: ATPase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, cell wall, nucleus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: regulatory particle AAA-ATPase 2A (TAIR:AT4G29040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35946 : 702.0) no description available & (gnl|cdd|31415 : 526.0) no description available & (reliability: 1436.0) & (original description: Putative rpt3, Description = 26S proteasome regulatory complex, PFAM = PF00004)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'nbv0.5scaffold2381_150481-155350' '(at4g19006 : 298.0) Proteasome component (PCI) domain protein; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: Proteasome component (PCI) domain protein (TAIR:AT5G45620.1); Has 1087 Blast hits to 1083 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 564; Fungi - 232; Plants - 168; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|38119 : 218.0) no description available & (reliability: 596.0) & (original description: Putative rpn9, Description = 26S proteasome non-ATPase regulatory subunit 13, PFAM = PF01399)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'nbv0.5scaffold2661_1-5238' '(at1g21720 : 310.0) 20S proteasome beta subunit PBC1 truncated protein (PBC1); proteasome beta subunit C1 (PBC1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit C2 (TAIR:AT1G77440.2); Has 3309 Blast hits to 3309 proteins in 436 species: Archae - 498; Bacteria - 34; Metazoa - 1257; Fungi - 828; Plants - 282; Viruses - 0; Other Eukaryotes - 410 (source: NCBI BLink). & (q9lst7|psb3_orysa : 300.0) Proteasome subunit beta type 3 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit beta-3) - Oryza sativa (Rice) & (gnl|cdd|35401 : 277.0) no description available & (gnl|cdd|48457 : 265.0) no description available & (reliability: 620.0) & (original description: Putative pakD, Description = Proteasome subunit beta type, PFAM = PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'nbv0.5scaffold3037_263764-278302' '(at5g09900 : 660.0) Encodes one of two isoforms for the 26S proteasome regulatory protein (RN) subunit RPN5. For many functions it acts redundantly with the paralogous gene RPN5b but also appears to exert independent effects.; EMBRYO DEFECTIVE 2107 (EMB2107); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: multicellular organismal development, ubiquitin-dependent protein catabolic process, embryo development ending in seed dormancy; LOCATED IN: proteasome complex, nucleus, proteasome regulatory particle, lid subcomplex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: regulatory particle non-ATPase subunit 5B (TAIR:AT5G64760.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36711 : 516.0) no description available & (gnl|cdd|34675 : 303.0) no description available & (reliability: 1320.0) & (original description: Putative RPN5B, Description = 26S proteasome non-ATPase regulatory subunit 12 homolog B, PFAM = PF01399)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'nbv0.5scaffold9438_6772-9649' '(at5g15610 : 146.0) Proteasome component (PCI) domain protein; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: Proteasome component (PCI) domain protein (TAIR:AT3G02200.2); Has 694 Blast hits to 694 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 312; Fungi - 189; Plants - 98; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|37964 : 111.0) no description available & (reliability: 292.0) & (original description: Putative At3g02200, Description = Eukaryotic translation initiation factor 3 subunit M, PFAM = PF01399)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben044scf00001478ctg011_22435-26842' '(at5g38660 : 218.0) mutant has Altered acclimation responses;; ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT (APE1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2854 (InterPro:IPR021275), Proteasome maturation factor UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana protein match is: Proteasome maturation factor UMP1 (TAIR:AT5G38650.1). & (gnl|cdd|38271 : 142.0) no description available & (gnl|cdd|68901 : 135.0) no description available & (reliability: 418.0) & (original description: Putative Sb08, Description = Putative uncharacterized protein Sb08, PFAM = PF05348)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben044scf00006786ctg001_1-2541' '(at4g31300 : 139.0) Encodes 20S proteasome subunit PBA1 (PBA1).; PBA1; FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to zinc ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome, subunit alpha/beta (InterPro:IPR001353), Peptidase T1A, proteasome beta-subunit (InterPro:IPR000243); BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit PBB2 (TAIR:AT5G40580.2). & (p93395|psb6_tobac : 123.0) Proteasome subunit beta type 6 precursor (EC 3.4.25.1) (Proteasome delta chain) (Tobacco cryptogein-induced protein 7) (tcI 7) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|48460 : 110.0) no description available & (gnl|cdd|35395 : 106.0) no description available & (reliability: 278.0) & (original description: Putative PBA1, Description = Proteasome subunit beta type-6, PFAM = PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben044scf00006897ctg002_19206-22304' '(p52427|psa4_spiol : 429.0) Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit alpha-3) (Proteasome 27 kDa subunit) - Spinacia oleracea (Spinach) & (at3g22110 : 412.0) Encodes the alpha-3 subunit of 20s proteasome.; 20S proteasome alpha subunit C1 (PAC1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT4G15165.1); Has 7432 Blast hits to 7428 proteins in 553 species: Archae - 896; Bacteria - 261; Metazoa - 2465; Fungi - 1789; Plants - 945; Viruses - 0; Other Eukaryotes - 1076 (source: NCBI BLink). & (gnl|cdd|48450 : 393.0) no description available & (gnl|cdd|35399 : 384.0) no description available & (reliability: 824.0) & (original description: Putative PAC1, Description = Proteasome subunit alpha type-4, PFAM = PF10584;PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben044scf00011408ctg013_146-7547' '(gnl|cdd|35961 : 816.0) no description available & (at3g03060 : 814.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATPase activity, zinc ion binding; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), Protein of unknown function DUF3523 (InterPro:IPR021911); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT5G16930.1); Has 38046 Blast hits to 31515 proteins in 3061 species: Archae - 1414; Bacteria - 11706; Metazoa - 8052; Fungi - 4459; Plants - 2737; Viruses - 110; Other Eukaryotes - 9568 (source: NCBI BLink). & (gnl|cdd|84432 : 108.0) no description available & (reliability: 1628.0) & (original description: Putative atad-3, Description = ATPase family AAA domain-containing protein 3, PFAM = PF12037;PF00004)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben044scf00012174ctg019_6319-13076' '(at4g29040 : 737.0) 26S proteasome AAA-ATPase subunit RPT2a (RPT2a) mRNA,; regulatory particle AAA-ATPase 2A (RPT2a); FUNCTIONS IN: ATPase activity; INVOLVED IN: in 17 processes; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT2G20140.1); Has 31112 Blast hits to 28760 proteins in 3112 species: Archae - 1431; Bacteria - 10308; Metazoa - 4877; Fungi - 3744; Plants - 3214; Viruses - 41; Other Eukaryotes - 7497 (source: NCBI BLink). & (gnl|cdd|35945 : 731.0) no description available & (p46466|prs4_orysa : 727.0) 26S protease regulatory subunit 4 homolog (TAT-binding protein homolog 2) - Oryza sativa (Rice) & (gnl|cdd|31415 : 524.0) no description available & (reliability: 1474.0) & (original description: Putative RPT2A, Description = 26S proteasome regulatory subunit 4 homolog A, PFAM = PF00004)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben044scf00013228ctg002_1-11629' '(at2g20580 : 1357.0) encoding the RPN subunits of the 26S proteasome; 26S proteasome regulatory subunit S2 1A (RPN1A); FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: regulation of cell cycle, protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit (InterPro:IPR016643), Armadillo-type fold (InterPro:IPR016024), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory subunit S2 1B (TAIR:AT4G28470.1); Has 1002 Blast hits to 968 proteins in 295 species: Archae - 0; Bacteria - 4; Metazoa - 376; Fungi - 294; Plants - 141; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|37216 : 1252.0) no description available & (gnl|cdd|34713 : 817.0) no description available & (reliability: 2714.0) & (original description: Putative RPN1A, Description = 26S proteasome non-ATPase regulatory subunit 2 homolog A, PFAM = PF01851;PF01851)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben044scf00015655ctg006_7855-17814' '(at1g64520 : 391.0) regulatory particle non-ATPase 12A (RPN12a); FUNCTIONS IN: peptidase activity; INVOLVED IN: in 14 processes; LOCATED IN: proteasome complex, nucleus, proteasome regulatory particle, lid subcomplex, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 26S proteasome non-ATPase regulatory subunit Rpn12 (InterPro:IPR006746), SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); BEST Arabidopsis thaliana protein match is: regulatory particle non-ATPase 12B (TAIR:AT5G42040.1); Has 474 Blast hits to 474 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 195; Fungi - 129; Plants - 70; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|38361 : 309.0) no description available & (gnl|cdd|67037 : 110.0) no description available & (reliability: 782.0) & (original description: Putative RPN12A, Description = 26S proteasome non-ATPase regulatory subunit 8 homolog A, PFAM = PF10075)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben044scf00017089ctg008_10946-23052' '(o82531|psb1_pethy : 429.0) Proteasome subunit beta type 1 (EC 3.4.25.1) (20S proteasome alpha subunit F) (20S proteasome subunit beta-6) - Petunia hybrida (Petunia) & (at3g60820 : 385.0) Encodes 20S proteasome beta subunit PBF1 (PBF1).; PBF1; FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: defense response to fungus, incompatible interaction, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: proteasome beta subunit C1 (TAIR:AT1G21720.1). & (gnl|cdd|48455 : 326.0) no description available & (gnl|cdd|35400 : 321.0) no description available & (reliability: 770.0) & (original description: Putative PBF1, Description = Proteasome subunit beta type-1, PFAM = PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben044scf00024234ctg010_15081-24745' '(p54778|prs6b_soltu : 763.0) 26S protease regulatory subunit 6B homolog - Solanum tuberosum (Potato) & (at5g58290 : 717.0) 26S proteasome AAA-ATPase subunit RPT3 (RPT3) mRNA,; regulatory particle triple-A ATPase 3 (RPT3); FUNCTIONS IN: ATPase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, cell wall, nucleus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: regulatory particle AAA-ATPase 2A (TAIR:AT4G29040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35946 : 700.0) no description available & (gnl|cdd|31415 : 524.0) no description available & (reliability: 1434.0) & (original description: Putative RPT3, Description = 26S protease regulatory subunit 6B homolog, PFAM = PF00004)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben044scf00029577ctg006_1-6668' '(at2g32730 : 992.0) 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit; FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cytosol, proteasome regulatory particle, base subcomplex, proteasome complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015), Armadillo-type fold (InterPro:IPR016024), 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (InterPro:IPR016642); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (TAIR:AT1G04810.1); Has 1219 Blast hits to 1116 proteins in 309 species: Archae - 13; Bacteria - 56; Metazoa - 400; Fungi - 388; Plants - 137; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|37273 : 816.0) no description available & (gnl|cdd|34718 : 521.0) no description available & (reliability: 1984.0) & (original description: Putative Psmd1, Description = 26S proteasome non-ATPase regulatory subunit 1, PFAM = PF01851)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben044scf00031397ctg003_3065-10569' '(at2g39990 : 383.0) translation initiation factor eIF2 p47 subunit homolog; eukaryotic translation initiation factor 2 (EIF2); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: pollen germination, translational initiation, embryo development; LOCATED IN: eukaryotic translation initiation factor 3 complex, nucleus, membrane, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: Mov34/MPN/PAD-1 family protein (TAIR:AT3G11270.2); Has 1103 Blast hits to 1103 proteins in 237 species: Archae - 0; Bacteria - 0; Metazoa - 465; Fungi - 269; Plants - 187; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (gnl|cdd|38186 : 343.0) no description available & (gnl|cdd|85425 : 97.0) no description available & (reliability: 766.0) & (original description: Putative TIF3F1, Description = Eukaryotic translation initiation factor 3 subunit F, PFAM = PF13012;PF01398)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben044scf00037558ctg009_3690-7775' '(at1g45000 : 682.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: proteasome complex, plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: regulatory particle triple-A ATPase 4A (TAIR:AT5G43010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35870 : 551.0) no description available & (gnl|cdd|31415 : 491.0) no description available & (q9fxt9|prs7_orysa : 320.0) 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) - Oryza sativa (Rice) & (reliability: 1364.0) & (original description: Putative RPT4B, Description = 26S protease regulatory subunit S10B homolog B, PFAM = PF00004)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben044scf00041417ctg008_7554-9746' '(p52427|psa4_spiol : 443.0) Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit alpha-3) (Proteasome 27 kDa subunit) - Spinacia oleracea (Spinach) & (at3g22110 : 440.0) Encodes the alpha-3 subunit of 20s proteasome.; 20S proteasome alpha subunit C1 (PAC1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT4G15165.1); Has 7432 Blast hits to 7428 proteins in 553 species: Archae - 896; Bacteria - 261; Metazoa - 2465; Fungi - 1789; Plants - 945; Viruses - 0; Other Eukaryotes - 1076 (source: NCBI BLink). & (gnl|cdd|48450 : 393.0) no description available & (gnl|cdd|35399 : 387.0) no description available & (reliability: 880.0) & (original description: Putative PAC1, Description = Proteasome subunit alpha type-4, PFAM = PF10584;PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben044scf00049407ctg014_11920-17503' '(at4g27680 : 404.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G53540.1); Has 30260 Blast hits to 27737 proteins in 3108 species: Archae - 1486; Bacteria - 10702; Metazoa - 4856; Fungi - 3534; Plants - 2690; Viruses - 34; Other Eukaryotes - 6958 (source: NCBI BLink). & (gnl|cdd|35956 : 321.0) no description available & (gnl|cdd|30812 : 146.0) no description available & (p54774|cdc48_soybn : 109.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 764.0) & (original description: Putative atad1, Description = ATPase family AAA domain-containing protein 1, PFAM = PF00004)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben044scf00058566ctg000_1-7049' '(gnl|cdd|35947 : 704.0) no description available & (at5g19990 : 702.0) 26S proteasome AAA-ATPase subunit; regulatory particle triple-A ATPase 6A (RPT6A); FUNCTIONS IN: ATPase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT5G20000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31415 : 542.0) no description available & (o64982|prs7_prupe : 333.0) 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) - Prunus persica (Peach) & (reliability: 1404.0) & (original description: Putative RPT6A, Description = 26S protease regulatory subunit 8 homolog A, PFAM = PF00004)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf00017_1-8523' '(p93395|psb6_tobac : 434.0) Proteasome subunit beta type 6 precursor (EC 3.4.25.1) (Proteasome delta chain) (Tobacco cryptogein-induced protein 7) (tcI 7) - Nicotiana tabacum (Common tobacco) & (at4g31300 : 389.0) Encodes 20S proteasome subunit PBA1 (PBA1).; PBA1; FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to zinc ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome, subunit alpha/beta (InterPro:IPR001353), Peptidase T1A, proteasome beta-subunit (InterPro:IPR000243); BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit PBB2 (TAIR:AT5G40580.2). & (gnl|cdd|35395 : 318.0) no description available & (gnl|cdd|48460 : 304.0) no description available & (reliability: 778.0) & (original description: Putative dapA, Description = Proteasome subunit beta type, PFAM = PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf00182_721897-734416' '(p93395|psb6_tobac : 407.0) Proteasome subunit beta type 6 precursor (EC 3.4.25.1) (Proteasome delta chain) (Tobacco cryptogein-induced protein 7) (tcI 7) - Nicotiana tabacum (Common tobacco) & (at4g31300 : 390.0) Encodes 20S proteasome subunit PBA1 (PBA1).; PBA1; FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to zinc ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome, subunit alpha/beta (InterPro:IPR001353), Peptidase T1A, proteasome beta-subunit (InterPro:IPR000243); BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit PBB2 (TAIR:AT5G40580.2). & (gnl|cdd|35395 : 323.0) no description available & (gnl|cdd|48460 : 308.0) no description available & (reliability: 780.0) & (original description: Putative psmB6, Description = Proteasome subunit beta type-6, PFAM = PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf00193_102001-105269' '(at1g29150 : 622.0) specifically interacts with FUS6/COP11 via the C-terminal domain of FUS6/COP11 and associates with an ATPase subunit of the 19S proteasome regulatory complex, AtS6A.; non-ATPase subunit 9 (ATS9); INVOLVED IN: response to cadmium ion, protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome complex, nucleus, proteasome regulatory particle, lid subcomplex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143); BEST Arabidopsis thaliana protein match is: proteasome family protein (TAIR:AT2G26990.1); Has 870 Blast hits to 851 proteins in 238 species: Archae - 0; Bacteria - 2; Metazoa - 296; Fungi - 224; Plants - 209; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (gnl|cdd|36676 : 520.0) no description available & (gnl|cdd|34760 : 393.0) no description available & (reliability: 1244.0) & (original description: Putative RPN6, Description = 26S proteasome non-ATPase regulatory subunit 11 homolog, PFAM = PF01399)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf00369_971192-977073' '(at3g05530 : 724.0) Encodes RPT5a (Regulatory Particle 5a), one of the six AAA-ATPases of the proteasome regulatory particle. Essential for gametophyte development. In Arabidopsis, the RPT5 subunit is encoded by two highly homologous genes, RPT5a and RPT5b. RPT5a and RPT5b show accession-dependent functional redundancy. In Wassilewskija (Ws) accession: mutant alleles of RPT5a displayed 50% pollen lethality, indicating that RPT5a is essential for male gametophyte development. In the Columbia (Col) accession, a rpt5a mutant allele did not display such a phenotype because the RPT5b Col allele complements the rpt5a defect in the male gametophyte, whereas the RPT5b Ws allele does not. Double rpt5a rpt5b mutants in Col background showed a complete male and female gametophyte lethal phenotype.; regulatory particle triple-A ATPase 5A (RPT5A); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: 26S proteasome AAA-ATPase subunit RPT5B (TAIR:AT1G09100.1); Has 33265 Blast hits to 30927 proteins in 3145 species: Archae - 1437; Bacteria - 12044; Metazoa - 4947; Fungi - 3672; Plants - 3322; Viruses - 56; Other Eukaryotes - 7787 (source: NCBI BLink). & (o23894|prs6a_bracm : 724.0) 26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1) - Brassica campestris (Field mustard) & (gnl|cdd|35871 : 721.0) no description available & (gnl|cdd|31415 : 503.0) no description available & (reliability: 1448.0) & (original description: Putative RPT5A, Description = 26S protease regulatory subunit 6A homolog A, PFAM = PF00004)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf00574_1096097-1104423' '(at5g05780 : 535.0) Encodes a putative 26S proteasome subunit RPN8a. The function of RPN8a and other 26S subunits may be required for specifying leaf adaxial identity.; RP non-ATPase subunit 8A (RPN8A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process, leaf morphogenesis; LOCATED IN: proteasome complex, proteasome regulatory particle, lid subcomplex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: Mov34/MPN/PAD-1 family protein (TAIR:AT3G11270.2). & (gnl|cdd|36769 : 445.0) no description available & (gnl|cdd|85425 : 113.0) no description available & (reliability: 1070.0) & (original description: Putative RPN8A, Description = 26S proteasome non-ATPase regulatory subunit 7 homolog A, PFAM = PF01398;PF13012)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf00612_309982-317131' '(at5g45620 : 570.0) Proteasome component (PCI) domain protein; BEST Arabidopsis thaliana protein match is: Proteasome component (PCI) domain protein (TAIR:AT4G19006.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38119 : 420.0) no description available & (reliability: 1140.0) & (original description: Putative RPN9A, Description = 26S proteasome non-ATPase regulatory subunit 13 homolog A, PFAM = PF01399)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf00747_1234038-1242100' '(at1g53750 : 795.0) 26S proteasome AAA-ATPase subunit RPT1a (RPT1a) mRNA,; regulatory particle triple-A 1A (RPT1A); FUNCTIONS IN: ATPase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: peptidyl-prolyl cis-trans isomerases;hydrolases;nucleoside-triphosphatases;ATP binding;nucleotide binding;ATPases (TAIR:AT1G53780.2); Has 30646 Blast hits to 28391 proteins in 3108 species: Archae - 1452; Bacteria - 10350; Metazoa - 4866; Fungi - 3564; Plants - 3128; Viruses - 30; Other Eukaryotes - 7256 (source: NCBI BLink). & (gnl|cdd|35948 : 792.0) no description available & (o64982|prs7_prupe : 791.0) 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) - Prunus persica (Peach) & (gnl|cdd|31415 : 545.0) no description available & (reliability: 1590.0) & (original description: Putative RPT1A, Description = 26S protease regulatory subunit 7 homolog A, PFAM = PF00004)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf00780_443933-451759' '(p93768|psmd3_tobac : 760.0) Probable 26S proteasome non-ATPase regulatory subunit 3 (26S proteasome subunit S3) (Nuclear antigen 21D7) - Nicotiana tabacum (Common tobacco) & (at1g20200 : 672.0) EMBRYO DEFECTIVE 2719 (EMB2719); FUNCTIONS IN: enzyme regulator activity; INVOLVED IN: ubiquitin-dependent protein catabolic process, embryo development ending in seed dormancy; LOCATED IN: proteasome complex, plasma membrane, proteasome regulatory particle, lid subcomplex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143), 26S proteasome regulatory subunit, C-terminal (InterPro:IPR013586); BEST Arabidopsis thaliana protein match is: PAM domain (PCI/PINT associated module) protein (TAIR:AT1G75990.1); Has 763 Blast hits to 760 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 312; Fungi - 164; Plants - 180; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|37792 : 621.0) no description available & (gnl|cdd|87512 : 106.0) no description available & (reliability: 1344.0) & (original description: Putative 21D7, Description = Probable 26S proteasome non-ATPase regulatory subunit 3, PFAM = PF01399;PF08375)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf01052_603324-609795' '(q8w425|psmd6_orysa : 614.0) 26S proteasome non-ATPase regulatory subunit 6 (26S proteasome regulatory particle non-ATPase subunit 7) (OsRPN7) - Oryza sativa (Rice) & (at4g24820 : 610.0) 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome complex, nucleus, plasma membrane, proteasome regulatory particle, lid subcomplex, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), 26S proteasome, regulatory subunit Rpn7 (InterPro:IPR019585); BEST Arabidopsis thaliana protein match is: 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain (TAIR:AT3G61140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35906 : 513.0) no description available & (gnl|cdd|34786 : 309.0) no description available & (reliability: 1220.0) & (original description: Putative RPN7, Description = 26S proteasome non-ATPase regulatory subunit 6 homolog, PFAM = PF10602;PF01399)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf01063_542366-550077' '(at3g03060 : 816.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATPase activity, zinc ion binding; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), Protein of unknown function DUF3523 (InterPro:IPR021911); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT5G16930.1); Has 38046 Blast hits to 31515 proteins in 3061 species: Archae - 1414; Bacteria - 11706; Metazoa - 8052; Fungi - 4459; Plants - 2737; Viruses - 110; Other Eukaryotes - 9568 (source: NCBI BLink). & (gnl|cdd|35961 : 811.0) no description available & (gnl|cdd|84432 : 108.0) no description available & (reliability: 1632.0) & (original description: Putative At3g03060, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF00004;PF12037)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf01068_558636-568385' '(at1g79210 : 422.0) N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; FUNCTIONS IN: endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: defense response to bacterium, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: proteasome subunit PAB1 (TAIR:AT1G16470.2); Has 6770 Blast hits to 6769 proteins in 496 species: Archae - 887; Bacteria - 41; Metazoa - 2415; Fungi - 1555; Plants - 857; Viruses - 0; Other Eukaryotes - 1015 (source: NCBI BLink). & (q9lsu2|psa2_orysa : 411.0) Proteasome subunit alpha type 2 (EC 3.4.25.1) (20S proteasome alpha subunit B) (20S proteasome subunit alpha-2) - Oryza sativa (Rice) & (gnl|cdd|48448 : 402.0) no description available & (gnl|cdd|35402 : 372.0) no description available & (reliability: 844.0) & (original description: Putative PAB1, Description = Proteasome subunit alpha type-2-A, PFAM = PF10584;PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf01085_241458-256912' '(p54778|prs6b_soltu : 742.0) 26S protease regulatory subunit 6B homolog - Solanum tuberosum (Potato) & (at5g58290 : 720.0) 26S proteasome AAA-ATPase subunit RPT3 (RPT3) mRNA,; regulatory particle triple-A ATPase 3 (RPT3); FUNCTIONS IN: ATPase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, cell wall, nucleus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: regulatory particle AAA-ATPase 2A (TAIR:AT4G29040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35946 : 704.0) no description available & (gnl|cdd|31415 : 524.0) no description available & (reliability: 1440.0) & (original description: Putative RPT3, Description = 26S protease regulatory subunit 6B homolog, PFAM = PF00004)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf01194_33607-50270' '(at4g27680 : 494.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G53540.1); Has 30260 Blast hits to 27737 proteins in 3108 species: Archae - 1486; Bacteria - 10702; Metazoa - 4856; Fungi - 3534; Plants - 2690; Viruses - 34; Other Eukaryotes - 6958 (source: NCBI BLink). & (gnl|cdd|35956 : 400.0) no description available & (gnl|cdd|30812 : 203.0) no description available & (p54774|cdc48_soybn : 154.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 962.0) & (original description: Putative atad1, Description = ATPase family AAA domain-containing protein 1, PFAM = PF00004)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf01220_277336-284051' '(gnl|cdd|35945 : 704.0) no description available & (at4g29040 : 702.0) 26S proteasome AAA-ATPase subunit RPT2a (RPT2a) mRNA,; regulatory particle AAA-ATPase 2A (RPT2a); FUNCTIONS IN: ATPase activity; INVOLVED IN: in 17 processes; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT2G20140.1); Has 31112 Blast hits to 28760 proteins in 3112 species: Archae - 1431; Bacteria - 10308; Metazoa - 4877; Fungi - 3744; Plants - 3214; Viruses - 41; Other Eukaryotes - 7497 (source: NCBI BLink). & (p46466|prs4_orysa : 692.0) 26S protease regulatory subunit 4 homolog (TAT-binding protein homolog 2) - Oryza sativa (Rice) & (gnl|cdd|31415 : 525.0) no description available & (reliability: 1404.0) & (original description: Putative RPT2A, Description = 26S proteasome regulatory subunit 4 homolog A, PFAM = PF00004)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf01259_1085296-1092842' '(q9m4t8|psa5_soybn : 450.0) Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S proteasome alpha subunit E) (20S proteasome subunit alpha-5) - Glycine max (Soybean) & (at3g14290 : 444.0) Encodes 20S proteasome subunit PAE2 (PAE2).; 20S proteasome alpha subunit E2 (PAE2); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit E1 (TAIR:AT1G53850.2); Has 8015 Blast hits to 8011 proteins in 570 species: Archae - 901; Bacteria - 216; Metazoa - 2770; Fungi - 1923; Plants - 1008; Viruses - 0; Other Eukaryotes - 1197 (source: NCBI BLink). & (gnl|cdd|35397 : 396.0) no description available & (gnl|cdd|48451 : 382.0) no description available & (reliability: 888.0) & (original description: Putative PAE1, Description = Proteasome subunit alpha type-5-A, PFAM = PF10584;PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf01462_264480-284794' '(at2g20580 : 1347.0) encoding the RPN subunits of the 26S proteasome; 26S proteasome regulatory subunit S2 1A (RPN1A); FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: regulation of cell cycle, protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit (InterPro:IPR016643), Armadillo-type fold (InterPro:IPR016024), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory subunit S2 1B (TAIR:AT4G28470.1); Has 1002 Blast hits to 968 proteins in 295 species: Archae - 0; Bacteria - 4; Metazoa - 376; Fungi - 294; Plants - 141; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|37216 : 1278.0) no description available & (gnl|cdd|34713 : 830.0) no description available & (reliability: 2694.0) & (original description: Putative RPN1A, Description = 26S proteasome non-ATPase regulatory subunit 2 homolog A, PFAM = PF01851;PF01851)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf01515_741071-748133' '(at5g19990 : 705.0) 26S proteasome AAA-ATPase subunit; regulatory particle triple-A ATPase 6A (RPT6A); FUNCTIONS IN: ATPase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT5G20000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35947 : 704.0) no description available & (gnl|cdd|31415 : 540.0) no description available & (o64982|prs7_prupe : 335.0) 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) - Prunus persica (Peach) & (reliability: 1410.0) & (original description: Putative RPT6A, Description = 26S protease regulatory subunit 8 homolog A, PFAM = PF00004)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf01550_120298-130828' '(at4g27680 : 629.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G53540.1); Has 30260 Blast hits to 27737 proteins in 3108 species: Archae - 1486; Bacteria - 10702; Metazoa - 4856; Fungi - 3534; Plants - 2690; Viruses - 34; Other Eukaryotes - 6958 (source: NCBI BLink). & (gnl|cdd|35956 : 455.0) no description available & (gnl|cdd|30812 : 205.0) no description available & (p54774|cdc48_soybn : 165.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 1186.0) & (original description: Putative atad1, Description = ATPase family AAA domain-containing protein 1, PFAM = PF00004)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf01633_75609-81630' '(at2g19560 : 600.0) encodes a protein with a PAM domain involved in ethylene signaling. eer5 mutants show ethylene hypersensitivity in relation to hypocotyl elongation. EER5 interacts with EIN2 and with COP9 in Y2H assays. EIN3 protein levels are the same in WT and eer5-1 mutants. EER5 may be involved in promoting a dampening of the ethylene response.; ENHANCED ETHYLENE RESPONSE 5 (EER5); CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143); Has 771 Blast hits to 770 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 260; Fungi - 323; Plants - 58; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (gnl|cdd|37899 : 210.0) no description available & (gnl|cdd|35159 : 142.0) no description available & (reliability: 1200.0) & (original description: Putative EER5, Description = Enhanced ethylene response protein 5, PFAM = PF01399)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf01671_718302-726906' '(at4g19006 : 601.0) Proteasome component (PCI) domain protein; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: Proteasome component (PCI) domain protein (TAIR:AT5G45620.1); Has 1087 Blast hits to 1083 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 564; Fungi - 232; Plants - 168; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|38119 : 422.0) no description available & (reliability: 1202.0) & (original description: Putative RPN9, Description = 26S proteasome regulatory subunit N9, PFAM = PF01399)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf01718_196673-201789' '(p93768|psmd3_tobac : 599.0) Probable 26S proteasome non-ATPase regulatory subunit 3 (26S proteasome subunit S3) (Nuclear antigen 21D7) - Nicotiana tabacum (Common tobacco) & (at1g20200 : 578.0) EMBRYO DEFECTIVE 2719 (EMB2719); FUNCTIONS IN: enzyme regulator activity; INVOLVED IN: ubiquitin-dependent protein catabolic process, embryo development ending in seed dormancy; LOCATED IN: proteasome complex, plasma membrane, proteasome regulatory particle, lid subcomplex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143), 26S proteasome regulatory subunit, C-terminal (InterPro:IPR013586); BEST Arabidopsis thaliana protein match is: PAM domain (PCI/PINT associated module) protein (TAIR:AT1G75990.1); Has 763 Blast hits to 760 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 312; Fungi - 164; Plants - 180; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|37792 : 501.0) no description available & (reliability: 1156.0) & (original description: Putative rpn3, Description = 26S proteasome non-ATPase regulatory subunit 3, PFAM = PF08375;PF01399)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf01738_469015-473532' '(p52427|psa4_spiol : 350.0) Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit alpha-3) (Proteasome 27 kDa subunit) - Spinacia oleracea (Spinach) & (at3g22110 : 333.0) Encodes the alpha-3 subunit of 20s proteasome.; 20S proteasome alpha subunit C1 (PAC1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT4G15165.1); Has 7432 Blast hits to 7428 proteins in 553 species: Archae - 896; Bacteria - 261; Metazoa - 2465; Fungi - 1789; Plants - 945; Viruses - 0; Other Eukaryotes - 1076 (source: NCBI BLink). & (gnl|cdd|48450 : 321.0) no description available & (gnl|cdd|35399 : 320.0) no description available & (reliability: 666.0) & (original description: Putative PAC1, Description = Proteasome subunit alpha type-4, PFAM = PF10584;PF00227;PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf01818_444592-454297' '(at1g21720 : 393.0) 20S proteasome beta subunit PBC1 truncated protein (PBC1); proteasome beta subunit C1 (PBC1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit C2 (TAIR:AT1G77440.2); Has 3309 Blast hits to 3309 proteins in 436 species: Archae - 498; Bacteria - 34; Metazoa - 1257; Fungi - 828; Plants - 282; Viruses - 0; Other Eukaryotes - 410 (source: NCBI BLink). & (q9lst7|psb3_orysa : 379.0) Proteasome subunit beta type 3 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit beta-3) - Oryza sativa (Rice) & (gnl|cdd|35401 : 356.0) no description available & (gnl|cdd|48457 : 336.0) no description available & (reliability: 786.0) & (original description: Putative psmb, Description = Proteasome subunit beta type, PFAM = PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf01848_156212-162347' '(at1g21720 : 309.0) 20S proteasome beta subunit PBC1 truncated protein (PBC1); proteasome beta subunit C1 (PBC1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit C2 (TAIR:AT1G77440.2); Has 3309 Blast hits to 3309 proteins in 436 species: Archae - 498; Bacteria - 34; Metazoa - 1257; Fungi - 828; Plants - 282; Viruses - 0; Other Eukaryotes - 410 (source: NCBI BLink). & (q9lst7|psb3_orysa : 298.0) Proteasome subunit beta type 3 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit beta-3) - Oryza sativa (Rice) & (gnl|cdd|35401 : 275.0) no description available & (gnl|cdd|48457 : 262.0) no description available & (reliability: 618.0) & (original description: Putative pakD, Description = Proteasome subunit beta type, PFAM = PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf02011_1013993-1025782' '(at1g64520 : 387.0) regulatory particle non-ATPase 12A (RPN12a); FUNCTIONS IN: peptidase activity; INVOLVED IN: in 14 processes; LOCATED IN: proteasome complex, nucleus, proteasome regulatory particle, lid subcomplex, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 26S proteasome non-ATPase regulatory subunit Rpn12 (InterPro:IPR006746), SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); BEST Arabidopsis thaliana protein match is: regulatory particle non-ATPase 12B (TAIR:AT5G42040.1); Has 474 Blast hits to 474 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 195; Fungi - 129; Plants - 70; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|38361 : 304.0) no description available & (gnl|cdd|67037 : 107.0) no description available & (reliability: 774.0) & (original description: Putative RPN12A, Description = 26S proteasome non-ATPase regulatory subunit 8 homolog A, PFAM = PF10075)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf02232_311531-318204' '(q9m4t8|psa5_soybn : 446.0) Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S proteasome alpha subunit E) (20S proteasome subunit alpha-5) - Glycine max (Soybean) & (at3g14290 : 438.0) Encodes 20S proteasome subunit PAE2 (PAE2).; 20S proteasome alpha subunit E2 (PAE2); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit E1 (TAIR:AT1G53850.2); Has 8015 Blast hits to 8011 proteins in 570 species: Archae - 901; Bacteria - 216; Metazoa - 2770; Fungi - 1923; Plants - 1008; Viruses - 0; Other Eukaryotes - 1197 (source: NCBI BLink). & (gnl|cdd|35397 : 395.0) no description available & (gnl|cdd|48451 : 380.0) no description available & (reliability: 876.0) & (original description: Putative PSMA5, Description = Proteasome subunit alpha type-5, PFAM = PF10584;PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf02242_321735-336271' '(at5g09900 : 653.0) Encodes one of two isoforms for the 26S proteasome regulatory protein (RN) subunit RPN5. For many functions it acts redundantly with the paralogous gene RPN5b but also appears to exert independent effects.; EMBRYO DEFECTIVE 2107 (EMB2107); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: multicellular organismal development, ubiquitin-dependent protein catabolic process, embryo development ending in seed dormancy; LOCATED IN: proteasome complex, nucleus, proteasome regulatory particle, lid subcomplex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: regulatory particle non-ATPase subunit 5B (TAIR:AT5G64760.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36711 : 514.0) no description available & (gnl|cdd|34675 : 306.0) no description available & (reliability: 1306.0) & (original description: Putative RPN5B, Description = 26S proteasome non-ATPase regulatory subunit 12 homolog B, PFAM = PF01399)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf02280_544846-553168' '(at2g39990 : 364.0) translation initiation factor eIF2 p47 subunit homolog; eukaryotic translation initiation factor 2 (EIF2); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: pollen germination, translational initiation, embryo development; LOCATED IN: eukaryotic translation initiation factor 3 complex, nucleus, membrane, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: Mov34/MPN/PAD-1 family protein (TAIR:AT3G11270.2); Has 1103 Blast hits to 1103 proteins in 237 species: Archae - 0; Bacteria - 0; Metazoa - 465; Fungi - 269; Plants - 187; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (gnl|cdd|38186 : 331.0) no description available & (gnl|cdd|85425 : 93.9) no description available & (reliability: 728.0) & (original description: Putative TIF3F1, Description = Eukaryotic translation initiation factor 3 subunit F, PFAM = PF13012;PF01398)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf02316_311815-318082' '(p54778|prs6b_soltu : 766.0) 26S protease regulatory subunit 6B homolog - Solanum tuberosum (Potato) & (at5g58290 : 716.0) 26S proteasome AAA-ATPase subunit RPT3 (RPT3) mRNA,; regulatory particle triple-A ATPase 3 (RPT3); FUNCTIONS IN: ATPase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, cell wall, nucleus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: regulatory particle AAA-ATPase 2A (TAIR:AT4G29040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35946 : 697.0) no description available & (gnl|cdd|31415 : 518.0) no description available & (reliability: 1432.0) & (original description: Putative RPT3, Description = 26S protease regulatory subunit 6B homolog, PFAM = PF00004)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf02479_116380-119123' '(p52427|psa4_spiol : 444.0) Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit alpha-3) (Proteasome 27 kDa subunit) - Spinacia oleracea (Spinach) & (at3g22110 : 441.0) Encodes the alpha-3 subunit of 20s proteasome.; 20S proteasome alpha subunit C1 (PAC1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT4G15165.1); Has 7432 Blast hits to 7428 proteins in 553 species: Archae - 896; Bacteria - 261; Metazoa - 2465; Fungi - 1789; Plants - 945; Viruses - 0; Other Eukaryotes - 1076 (source: NCBI BLink). & (gnl|cdd|48450 : 396.0) no description available & (gnl|cdd|35399 : 390.0) no description available & (reliability: 882.0) & (original description: Putative PAC2, Description = Putative proteasome subunit alpha type-4-B, PFAM = PF00227;PF10584)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf02487_48274-54817' '(o24361|psb5_spiol : 459.0) Proteasome subunit beta type 5 precursor (EC 3.4.25.1) (20S proteasome subunit E) (Proteasome epsilon chain) - Spinacia oleracea (Spinach) & (at3g26340 : 449.0) N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; FUNCTIONS IN: endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: proteolysis involved in cellular protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Peptidase T1A, proteasome beta-subunit (InterPro:IPR000243), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit E1 (TAIR:AT1G13060.1); Has 6541 Blast hits to 6534 proteins in 612 species: Archae - 835; Bacteria - 512; Metazoa - 2083; Fungi - 1372; Plants - 865; Viruses - 0; Other Eukaryotes - 874 (source: NCBI BLink). & (gnl|cdd|35396 : 390.0) no description available & (gnl|cdd|48459 : 345.0) no description available & (reliability: 898.0) & (original description: Putative psb5, Description = Proteasome subunit beta type, PFAM = PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf02606_444470-453722' '(at1g21720 : 395.0) 20S proteasome beta subunit PBC1 truncated protein (PBC1); proteasome beta subunit C1 (PBC1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit C2 (TAIR:AT1G77440.2); Has 3309 Blast hits to 3309 proteins in 436 species: Archae - 498; Bacteria - 34; Metazoa - 1257; Fungi - 828; Plants - 282; Viruses - 0; Other Eukaryotes - 410 (source: NCBI BLink). & (q9lst7|psb3_orysa : 377.0) Proteasome subunit beta type 3 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit beta-3) - Oryza sativa (Rice) & (gnl|cdd|35401 : 358.0) no description available & (gnl|cdd|48457 : 335.0) no description available & (reliability: 790.0) & (original description: Putative PBC1, Description = Proteasome subunit beta type-3-A, PFAM = PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf02657_42745-51568' '(at5g38660 : 213.0) mutant has Altered acclimation responses;; ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT (APE1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2854 (InterPro:IPR021275), Proteasome maturation factor UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana protein match is: Proteasome maturation factor UMP1 (TAIR:AT5G38650.1). & (gnl|cdd|68901 : 140.0) no description available & (gnl|cdd|38271 : 138.0) no description available & (reliability: 412.0) & (original description: Putative Sb08, Description = Putative uncharacterized protein Sb08, PFAM = PF05348)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf02873_264368-275490' '(at1g16470 : 422.0) Encodes 20S proteasome subunit PAB1 (PAB1).; proteasome subunit PAB1 (PAB1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to zinc ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT1G79210.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9lsu2|psa2_orysa : 411.0) Proteasome subunit alpha type 2 (EC 3.4.25.1) (20S proteasome alpha subunit B) (20S proteasome subunit alpha-2) - Oryza sativa (Rice) & (gnl|cdd|48448 : 402.0) no description available & (gnl|cdd|35402 : 374.0) no description available & (reliability: 840.0) & (original description: Putative PAB1, Description = Proteasome subunit alpha type-2-A, PFAM = PF00227;PF10584)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf03208_816045-831475' '(at2g32730 : 1384.0) 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit; FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cytosol, proteasome regulatory particle, base subcomplex, proteasome complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015), Armadillo-type fold (InterPro:IPR016024), 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (InterPro:IPR016642); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (TAIR:AT1G04810.1); Has 1219 Blast hits to 1116 proteins in 309 species: Archae - 13; Bacteria - 56; Metazoa - 400; Fungi - 388; Plants - 137; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|37273 : 1244.0) no description available & (gnl|cdd|34718 : 800.0) no description available & (reliability: 2768.0) & (original description: Putative psmD1, Description = 26S proteasome regulatory subunit S1, PFAM = PF01851;PF13646)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf03278_777510-791863' '(q9m4t8|psa5_soybn : 305.0) Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S proteasome alpha subunit E) (20S proteasome subunit alpha-5) - Glycine max (Soybean) & (at3g14290 : 296.0) Encodes 20S proteasome subunit PAE2 (PAE2).; 20S proteasome alpha subunit E2 (PAE2); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit E1 (TAIR:AT1G53850.2); Has 8015 Blast hits to 8011 proteins in 570 species: Archae - 901; Bacteria - 216; Metazoa - 2770; Fungi - 1923; Plants - 1008; Viruses - 0; Other Eukaryotes - 1197 (source: NCBI BLink). & (gnl|cdd|35397 : 267.0) no description available & (gnl|cdd|48451 : 248.0) no description available & (reliability: 592.0) & (original description: Putative pup2, Description = Proteasome subunit alpha type, PFAM = PF00227;PF10584)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf03341_40372-47962' '(gnl|cdd|35961 : 826.0) no description available & (at3g03060 : 813.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATPase activity, zinc ion binding; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), Protein of unknown function DUF3523 (InterPro:IPR021911); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT5G16930.1); Has 38046 Blast hits to 31515 proteins in 3061 species: Archae - 1414; Bacteria - 11706; Metazoa - 8052; Fungi - 4459; Plants - 2737; Viruses - 110; Other Eukaryotes - 9568 (source: NCBI BLink). & (gnl|cdd|84432 : 108.0) no description available & (reliability: 1626.0) & (original description: Putative v1g165363, Description = Predicted protein, PFAM = PF00004;PF12037)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf03712_19986-30095' '(o24361|psb5_spiol : 465.0) Proteasome subunit beta type 5 precursor (EC 3.4.25.1) (20S proteasome subunit E) (Proteasome epsilon chain) - Spinacia oleracea (Spinach) & (at3g26340 : 451.0) N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; FUNCTIONS IN: endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: proteolysis involved in cellular protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Peptidase T1A, proteasome beta-subunit (InterPro:IPR000243), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit E1 (TAIR:AT1G13060.1); Has 6541 Blast hits to 6534 proteins in 612 species: Archae - 835; Bacteria - 512; Metazoa - 2083; Fungi - 1372; Plants - 865; Viruses - 0; Other Eukaryotes - 874 (source: NCBI BLink). & (gnl|cdd|35396 : 393.0) no description available & (gnl|cdd|48459 : 346.0) no description available & (reliability: 902.0) & (original description: Putative psb5, Description = Proteasome subunit beta type, PFAM = PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf03819_427051-432507' '(at5g15610 : 531.0) Proteasome component (PCI) domain protein; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: Proteasome component (PCI) domain protein (TAIR:AT3G02200.2); Has 694 Blast hits to 694 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 312; Fungi - 189; Plants - 98; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|37964 : 356.0) no description available & (reliability: 1062.0) & (original description: Putative At5g15610, Description = Eukaryotic translation initiation factor 3 subunit M, PFAM = PF01399)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf03842_59399-69170' '(p54778|prs6b_soltu : 763.0) 26S protease regulatory subunit 6B homolog - Solanum tuberosum (Potato) & (at5g58290 : 716.0) 26S proteasome AAA-ATPase subunit RPT3 (RPT3) mRNA,; regulatory particle triple-A ATPase 3 (RPT3); FUNCTIONS IN: ATPase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, cell wall, nucleus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: regulatory particle AAA-ATPase 2A (TAIR:AT4G29040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35946 : 700.0) no description available & (gnl|cdd|31415 : 523.0) no description available & (reliability: 1432.0) & (original description: Putative RPT3, Description = 26S protease regulatory subunit 6B homolog, PFAM = PF00004)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf03962_120933-126277' '(at5g57950 : 275.0) 26S proteasome regulatory subunit, putative; CONTAINS InterPro DOMAIN/s: PDZ/DHR/GLGF (InterPro:IPR001478); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38339 : 189.0) no description available & (reliability: 550.0) & (original description: Putative At5g57950, Description = 26S proteasome non-ATPase regulatory subunit 9, PFAM = PF13180)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf04103_736291-745592' '(at5g19990 : 711.0) 26S proteasome AAA-ATPase subunit; regulatory particle triple-A ATPase 6A (RPT6A); FUNCTIONS IN: ATPase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT5G20000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35947 : 700.0) no description available & (gnl|cdd|31415 : 535.0) no description available & (o64982|prs7_prupe : 330.0) 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) - Prunus persica (Peach) & (reliability: 1422.0) & (original description: Putative RPT6A, Description = 26S protease regulatory subunit 8 homolog A, PFAM = PF00004)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf04300_507453-557970' '(gnl|cdd|35871 : 718.0) no description available & (at3g05530 : 709.0) Encodes RPT5a (Regulatory Particle 5a), one of the six AAA-ATPases of the proteasome regulatory particle. Essential for gametophyte development. In Arabidopsis, the RPT5 subunit is encoded by two highly homologous genes, RPT5a and RPT5b. RPT5a and RPT5b show accession-dependent functional redundancy. In Wassilewskija (Ws) accession: mutant alleles of RPT5a displayed 50% pollen lethality, indicating that RPT5a is essential for male gametophyte development. In the Columbia (Col) accession, a rpt5a mutant allele did not display such a phenotype because the RPT5b Col allele complements the rpt5a defect in the male gametophyte, whereas the RPT5b Ws allele does not. Double rpt5a rpt5b mutants in Col background showed a complete male and female gametophyte lethal phenotype.; regulatory particle triple-A ATPase 5A (RPT5A); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: 26S proteasome AAA-ATPase subunit RPT5B (TAIR:AT1G09100.1); Has 33265 Blast hits to 30927 proteins in 3145 species: Archae - 1437; Bacteria - 12044; Metazoa - 4947; Fungi - 3672; Plants - 3322; Viruses - 56; Other Eukaryotes - 7787 (source: NCBI BLink). & (o23894|prs6a_bracm : 708.0) 26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1) - Brassica campestris (Field mustard) & (gnl|cdd|31415 : 511.0) no description available & (reliability: 1418.0) & (original description: Putative RPT5A, Description = 26S protease regulatory subunit 6A homolog A, PFAM = PF00004)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf04528_1223413-1226039' '(p93395|psb6_tobac : 240.0) Proteasome subunit beta type 6 precursor (EC 3.4.25.1) (Proteasome delta chain) (Tobacco cryptogein-induced protein 7) (tcI 7) - Nicotiana tabacum (Common tobacco) & (at4g31300 : 225.0) Encodes 20S proteasome subunit PBA1 (PBA1).; PBA1; FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to zinc ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome, subunit alpha/beta (InterPro:IPR001353), Peptidase T1A, proteasome beta-subunit (InterPro:IPR000243); BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit PBB2 (TAIR:AT5G40580.2). & (gnl|cdd|35395 : 199.0) no description available & (gnl|cdd|48460 : 192.0) no description available & (reliability: 450.0) & (original description: Putative PBA1, Description = Proteasome subunit beta type, PFAM = PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf04549_890737-898108' '(at1g56450 : 412.0) 20S proteasome beta subunit PBG1 (PBG1) mRNA, complete cds; 20S proteasome beta subunit G1 (PBG1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, response to salt stress, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome endopeptidase complex, beta subunit (InterPro:IPR016295), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT4G31300.2); Has 2530 Blast hits to 2530 proteins in 413 species: Archae - 597; Bacteria - 46; Metazoa - 632; Fungi - 578; Plants - 277; Viruses - 0; Other Eukaryotes - 400 (source: NCBI BLink). & (gnl|cdd|35406 : 321.0) no description available & (gnl|cdd|48458 : 291.0) no description available & (reliability: 824.0) & (original description: Putative PBG1, Description = Proteasome subunit beta type-4, PFAM = PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf04745_204848-222646' '(at3g15180 : 519.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), 26S proteasome non-ATPase regulatory subunit 5 (InterPro:IPR019538). & (gnl|cdd|39614 : 415.0) no description available & (reliability: 1038.0) & (original description: Putative At3g15180, Description = ARM repeat superfamily protein, PFAM = PF10508)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf04901_88837-96679' '(q9xg77|psa6_tobac : 482.0) Proteasome subunit alpha type 6 (EC 3.4.25.1) (20S proteasome alpha subunit A) (20S proteasome subunit alpha-1) - Nicotiana tabacum (Common tobacco) & (at2g05840 : 447.0) Encodes 20S proteasome subunit PAA2 (PAA2).; 20S proteasome subunit PAA2 (PAA2); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome; EXPRESSED IN: fruit, guard cell, cultured cell; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: proteasome alpha subunit A1 (TAIR:AT5G35590.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35403 : 397.0) no description available & (gnl|cdd|48452 : 376.0) no description available & (reliability: 894.0) & (original description: Putative PAA1, Description = Proteasome subunit alpha type-6, PFAM = PF00227;PF10584)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf04940_68979-71722' '(o82530|psa4_pethy : 435.0) Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit alpha-3) - Petunia hybrida (Petunia) & (at3g22110 : 417.0) Encodes the alpha-3 subunit of 20s proteasome.; 20S proteasome alpha subunit C1 (PAC1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT4G15165.1); Has 7432 Blast hits to 7428 proteins in 553 species: Archae - 896; Bacteria - 261; Metazoa - 2465; Fungi - 1789; Plants - 945; Viruses - 0; Other Eukaryotes - 1076 (source: NCBI BLink). & (gnl|cdd|48450 : 396.0) no description available & (gnl|cdd|35399 : 383.0) no description available & (reliability: 834.0) & (original description: Putative PAC1, Description = Proteasome subunit alpha type-4-A, PFAM = PF10584;PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf04992_44200-56381' '(at2g20580 : 1322.0) encoding the RPN subunits of the 26S proteasome; 26S proteasome regulatory subunit S2 1A (RPN1A); FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: regulation of cell cycle, protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit (InterPro:IPR016643), Armadillo-type fold (InterPro:IPR016024), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory subunit S2 1B (TAIR:AT4G28470.1); Has 1002 Blast hits to 968 proteins in 295 species: Archae - 0; Bacteria - 4; Metazoa - 376; Fungi - 294; Plants - 141; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|37216 : 1289.0) no description available & (gnl|cdd|34713 : 823.0) no description available & (reliability: 2644.0) & (original description: Putative RPN1A, Description = 26S proteasome non-ATPase regulatory subunit 2 homolog A, PFAM = PF01851;PF01851)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf05300_286412-295573' '(at1g45000 : 728.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: proteasome complex, plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: regulatory particle triple-A ATPase 4A (TAIR:AT5G43010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35870 : 574.0) no description available & (gnl|cdd|31415 : 498.0) no description available & (q9fxt9|prs7_orysa : 324.0) 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) - Oryza sativa (Rice) & (reliability: 1456.0) & (original description: Putative RPT4B, Description = 26S protease regulatory subunit S10B homolog B, PFAM = PF00004)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf05712_3913-7241' '(at1g29150 : 540.0) specifically interacts with FUS6/COP11 via the C-terminal domain of FUS6/COP11 and associates with an ATPase subunit of the 19S proteasome regulatory complex, AtS6A.; non-ATPase subunit 9 (ATS9); INVOLVED IN: response to cadmium ion, protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome complex, nucleus, proteasome regulatory particle, lid subcomplex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143); BEST Arabidopsis thaliana protein match is: proteasome family protein (TAIR:AT2G26990.1); Has 870 Blast hits to 851 proteins in 238 species: Archae - 0; Bacteria - 2; Metazoa - 296; Fungi - 224; Plants - 209; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (gnl|cdd|36676 : 484.0) no description available & (gnl|cdd|34760 : 364.0) no description available & (reliability: 1080.0) & (original description: Putative RPN6, Description = 26S proteasome non-ATPase regulatory subunit 11 homolog, PFAM = PF01399)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf05761_242913-248621' '(at5g15610 : 543.0) Proteasome component (PCI) domain protein; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: Proteasome component (PCI) domain protein (TAIR:AT3G02200.2); Has 694 Blast hits to 694 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 312; Fungi - 189; Plants - 98; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|37964 : 344.0) no description available & (reliability: 1086.0) & (original description: Putative At5g15610, Description = Eukaryotic translation initiation factor 3 subunit M, PFAM = PF01399)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf06171_211125-217887' '(at5g42790 : 425.0) encodes a protein with extensive homology to the largest subunit of the multicatalytic proteinase complex (proteasome). Negatively regulates thiol biosynthesis and arsenic tolerance.; proteasome alpha subunit F1 (PAF1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to arsenic, protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit F2 (TAIR:AT1G47250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36081 : 380.0) no description available & (p52428|psa1_orysa : 367.0) Proteasome subunit alpha type 1 (EC 3.4.25.1) (20S proteasome alpha subunit F) (20S proteasome subunit alpha-6) (Proteasome component C2) - Oryza sativa (Rice) & (gnl|cdd|48447 : 361.0) no description available & (reliability: 850.0) & (original description: Putative PAF1, Description = Proteasome subunit alpha type-1, PFAM = PF00227;PF10584)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf06223_96401-138349' '(p52427|psa4_spiol : 430.0) Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit alpha-3) (Proteasome 27 kDa subunit) - Spinacia oleracea (Spinach) & (at3g22110 : 419.0) Encodes the alpha-3 subunit of 20s proteasome.; 20S proteasome alpha subunit C1 (PAC1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT4G15165.1); Has 7432 Blast hits to 7428 proteins in 553 species: Archae - 896; Bacteria - 261; Metazoa - 2465; Fungi - 1789; Plants - 945; Viruses - 0; Other Eukaryotes - 1076 (source: NCBI BLink). & (gnl|cdd|48450 : 391.0) no description available & (gnl|cdd|35399 : 387.0) no description available & (reliability: 838.0) & (original description: Putative PAC1, Description = Proteasome subunit alpha type-4, PFAM = PF00227;PF10584)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf06600_103393-108525' '(at3g27430 : 472.0) Encodes 20S proteasome beta subunit PBB1 (PBB1).; PBB1; FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase T1A, proteasome beta-subunit (InterPro:IPR000243), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit PBB2 (TAIR:AT5G40580.3). & (gnl|cdd|35394 : 406.0) no description available & (gnl|cdd|48461 : 344.0) no description available & (p93395|psb6_tobac : 105.0) Proteasome subunit beta type 6 precursor (EC 3.4.25.1) (Proteasome delta chain) (Tobacco cryptogein-induced protein 7) (tcI 7) - Nicotiana tabacum (Common tobacco) & (reliability: 944.0) & (original description: Putative psmb7, Description = Proteasome subunit beta type, PFAM = PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf06625_255312-273317' '(at5g53540 : 570.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G27680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35956 : 434.0) no description available & (gnl|cdd|30812 : 204.0) no description available & (p54774|cdc48_soybn : 170.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 1140.0) & (original description: Putative atad1b, Description = ATPase family AAA domain-containing protein 1-B, PFAM = PF00004)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf06716_48530-57212' '(o24362|psa3_spiol : 444.0) Proteasome subunit alpha type 3 (EC 3.4.25.1) (20S proteasome alpha subunit G) (20S proteasome subunit alpha-7) (Proteasome component C8) - Spinacia oleracea (Spinach) & (at2g27020 : 432.0) Encodes 20S proteasome alpha 7 subunit PAG1.; 20S proteasome alpha subunit G1 (PAG1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, response to cold, ubiquitin-dependent protein catabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit E2 (TAIR:AT3G14290.1); Has 5862 Blast hits to 5858 proteins in 463 species: Archae - 870; Bacteria - 9; Metazoa - 1980; Fungi - 1345; Plants - 774; Viruses - 0; Other Eukaryotes - 884 (source: NCBI BLink). & (gnl|cdd|35405 : 396.0) no description available & (gnl|cdd|48449 : 379.0) no description available & (reliability: 864.0) & (original description: Putative psmA3, Description = Proteasome subunit alpha type, PFAM = PF00227;PF10584)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf06996_302528-329835' '(at4g31300 : 139.0) Encodes 20S proteasome subunit PBA1 (PBA1).; PBA1; FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to zinc ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome, subunit alpha/beta (InterPro:IPR001353), Peptidase T1A, proteasome beta-subunit (InterPro:IPR000243); BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit PBB2 (TAIR:AT5G40580.2). & (p93395|psb6_tobac : 127.0) Proteasome subunit beta type 6 precursor (EC 3.4.25.1) (Proteasome delta chain) (Tobacco cryptogein-induced protein 7) (tcI 7) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|48460 : 114.0) no description available & (gnl|cdd|35395 : 109.0) no description available & (reliability: 278.0) & (original description: Putative PBA1, Description = Proteasome subunit beta type-6, PFAM = PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf06996_327584-330267' '(at4g31300 : 139.0) Encodes 20S proteasome subunit PBA1 (PBA1).; PBA1; FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to zinc ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome, subunit alpha/beta (InterPro:IPR001353), Peptidase T1A, proteasome beta-subunit (InterPro:IPR000243); BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit PBB2 (TAIR:AT5G40580.2). & (p93395|psb6_tobac : 130.0) Proteasome subunit beta type 6 precursor (EC 3.4.25.1) (Proteasome delta chain) (Tobacco cryptogein-induced protein 7) (tcI 7) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|48460 : 114.0) no description available & (gnl|cdd|35395 : 109.0) no description available & (reliability: 278.0) & (original description: Putative PBA1, Description = Proteasome subunit beta type, PFAM = PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf07066_209046-216900' '(q9sxu1|psa7_cicar : 414.0) Proteasome subunit alpha type 7 (EC 3.4.25.1) (20S proteasome alpha subunit D) (20S proteasome subunit alpha-4) - Cicer arietinum (Chickpea) (Garbanzo) & (at5g66140 : 402.0) Encodes alpha5 subunit of 20S proteosome complex involved in protein degradation.; proteasome alpha subunit D2 (PAD2); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, proteasome core complex, alpha-subunit complex, chloroplast, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit PAD1 (TAIR:AT3G51260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35404 : 373.0) no description available & (gnl|cdd|48453 : 366.0) no description available & (reliability: 804.0) & (original description: Putative PAD1, Description = Proteasome subunit alpha type-7, PFAM = PF10584;PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf07102_82394-93358' '(at3g53970 : 226.0) proteasome inhibitor-related; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome Inhibitor PI31 (InterPro:IPR021625); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39958 : 173.0) no description available & (reliability: 452.0) & (original description: Putative At3g53970, Description = Probable proteasome inhibitor, PFAM = PF08577;PF11566)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf07109_2873-16060' '(q9sxu1|psa7_cicar : 411.0) Proteasome subunit alpha type 7 (EC 3.4.25.1) (20S proteasome alpha subunit D) (20S proteasome subunit alpha-4) - Cicer arietinum (Chickpea) (Garbanzo) & (at3g51260 : 402.0) 20S proteosomal alpha subunits. Interacts with SnRK, SKP1/ASK1 during proteasomal binding of an SCF ubiquitin ligase.; 20S proteasome alpha subunit PAD1 (PAD1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: proteasome alpha subunit D2 (TAIR:AT5G66140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35404 : 374.0) no description available & (gnl|cdd|48453 : 365.0) no description available & (reliability: 798.0) & (original description: Putative PAD1, Description = Proteasome subunit alpha type-7, PFAM = PF10584;PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf07364_154134-160625' '(at5g23540 : 538.0) Mov34/MPN/PAD-1 family protein; INVOLVED IN: response to salt stress, protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome complex, nucleus, proteasome regulatory particle, lid subcomplex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: COP9-signalosome 5B (TAIR:AT1G71230.1); Has 1553 Blast hits to 1553 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 704; Fungi - 411; Plants - 244; Viruses - 0; Other Eukaryotes - 194 (source: NCBI BLink). & (gnl|cdd|36768 : 362.0) no description available & (gnl|cdd|47561 : 135.0) no description available & (reliability: 1076.0) & (original description: Putative RPN11, Description = 26S proteasome non-ATPase regulatory subunit 14 homolog, PFAM = PF13012;PF01398)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf08091_5910-12909' '(at1g45000 : 719.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: proteasome complex, plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: regulatory particle triple-A ATPase 4A (TAIR:AT5G43010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35870 : 575.0) no description available & (gnl|cdd|31415 : 497.0) no description available & (q9fxt9|prs7_orysa : 320.0) 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) - Oryza sativa (Rice) & (reliability: 1438.0) & (original description: Putative RPT4B, Description = 26S protease regulatory subunit S10B homolog B, PFAM = PF00004)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf08194_4603-22645' '(o82531|psb1_pethy : 432.0) Proteasome subunit beta type 1 (EC 3.4.25.1) (20S proteasome alpha subunit F) (20S proteasome subunit beta-6) - Petunia hybrida (Petunia) & (at3g60820 : 384.0) Encodes 20S proteasome beta subunit PBF1 (PBF1).; PBF1; FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: defense response to fungus, incompatible interaction, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: proteasome beta subunit C1 (TAIR:AT1G21720.1). & (gnl|cdd|48455 : 327.0) no description available & (gnl|cdd|35400 : 322.0) no description available & (reliability: 768.0) & (original description: Putative PBF1, Description = Proteasome subunit beta type-1, PFAM = PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf08298_407796-415275' '(gnl|cdd|35945 : 739.0) no description available & (at4g29040 : 735.0) 26S proteasome AAA-ATPase subunit RPT2a (RPT2a) mRNA,; regulatory particle AAA-ATPase 2A (RPT2a); FUNCTIONS IN: ATPase activity; INVOLVED IN: in 17 processes; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT2G20140.1); Has 31112 Blast hits to 28760 proteins in 3112 species: Archae - 1431; Bacteria - 10308; Metazoa - 4877; Fungi - 3744; Plants - 3214; Viruses - 41; Other Eukaryotes - 7497 (source: NCBI BLink). & (p46466|prs4_orysa : 727.0) 26S protease regulatory subunit 4 homolog (TAT-binding protein homolog 2) - Oryza sativa (Rice) & (gnl|cdd|31415 : 527.0) no description available & (reliability: 1470.0) & (original description: Putative RPT2A, Description = 26S proteasome regulatory subunit 4 homolog A, PFAM = PF00004)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf08326_179252-187360' '(at1g64520 : 396.0) regulatory particle non-ATPase 12A (RPN12a); FUNCTIONS IN: peptidase activity; INVOLVED IN: in 14 processes; LOCATED IN: proteasome complex, nucleus, proteasome regulatory particle, lid subcomplex, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 26S proteasome non-ATPase regulatory subunit Rpn12 (InterPro:IPR006746), SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); BEST Arabidopsis thaliana protein match is: regulatory particle non-ATPase 12B (TAIR:AT5G42040.1); Has 474 Blast hits to 474 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 195; Fungi - 129; Plants - 70; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|38361 : 312.0) no description available & (gnl|cdd|67037 : 108.0) no description available & (reliability: 792.0) & (original description: Putative RPN12A, Description = 26S proteasome non-ATPase regulatory subunit 8 homolog A, PFAM = PF10075)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf09547_267161-275376' '(at3g22630 : 353.0) Encodes 20S proteasome beta subunit PBD1 (PBD1).; 20S proteasome beta subunit D1 (PBD1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, apoplast, plasma membrane, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit D2 (TAIR:AT4G14800.1); Has 4110 Blast hits to 4110 proteins in 452 species: Archae - 623; Bacteria - 60; Metazoa - 1340; Fungi - 964; Plants - 536; Viruses - 0; Other Eukaryotes - 587 (source: NCBI BLink). & (q9lst6|psb2_orysa : 308.0) Proteasome subunit beta type 2 (EC 3.4.25.1) (20S proteasome alpha subunit D) (20S proteasome subunit beta-4) - Oryza sativa (Rice) & (gnl|cdd|48456 : 286.0) no description available & (gnl|cdd|35398 : 283.0) no description available & (reliability: 706.0) & (original description: Putative PBD1, Description = Proteasome subunit beta type-2-A, PFAM = PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf09774_481930-495842' '(gnl|cdd|37216 : 469.0) no description available & (at2g20580 : 452.0) encoding the RPN subunits of the 26S proteasome; 26S proteasome regulatory subunit S2 1A (RPN1A); FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: regulation of cell cycle, protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit (InterPro:IPR016643), Armadillo-type fold (InterPro:IPR016024), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory subunit S2 1B (TAIR:AT4G28470.1); Has 1002 Blast hits to 968 proteins in 295 species: Archae - 0; Bacteria - 4; Metazoa - 376; Fungi - 294; Plants - 141; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|34713 : 300.0) no description available & (reliability: 904.0) & (original description: Putative mts4, Description = 26S proteasome non-ATPase regulatory subunit 2, PFAM = )' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf09869_93432-103422' '(o24362|psa3_spiol : 448.0) Proteasome subunit alpha type 3 (EC 3.4.25.1) (20S proteasome alpha subunit G) (20S proteasome subunit alpha-7) (Proteasome component C8) - Spinacia oleracea (Spinach) & (at2g27020 : 440.0) Encodes 20S proteasome alpha 7 subunit PAG1.; 20S proteasome alpha subunit G1 (PAG1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, response to cold, ubiquitin-dependent protein catabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit E2 (TAIR:AT3G14290.1); Has 5862 Blast hits to 5858 proteins in 463 species: Archae - 870; Bacteria - 9; Metazoa - 1980; Fungi - 1345; Plants - 774; Viruses - 0; Other Eukaryotes - 884 (source: NCBI BLink). & (gnl|cdd|35405 : 396.0) no description available & (gnl|cdd|48449 : 379.0) no description available & (reliability: 880.0) & (original description: Putative PAG1, Description = Proteasome subunit alpha type-3, PFAM = PF10584;PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf09870_52747-60719' '(o82531|psb1_pethy : 424.0) Proteasome subunit beta type 1 (EC 3.4.25.1) (20S proteasome alpha subunit F) (20S proteasome subunit beta-6) - Petunia hybrida (Petunia) & (at3g60820 : 386.0) Encodes 20S proteasome beta subunit PBF1 (PBF1).; PBF1; FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: defense response to fungus, incompatible interaction, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: proteasome beta subunit C1 (TAIR:AT1G21720.1). & (gnl|cdd|48455 : 330.0) no description available & (gnl|cdd|35400 : 326.0) no description available & (reliability: 772.0) & (original description: Putative PBF1, Description = Proteasome subunit beta type-1, PFAM = PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf10305_183851-186274' '(at2g27020 : 152.0) Encodes 20S proteasome alpha 7 subunit PAG1.; 20S proteasome alpha subunit G1 (PAG1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, response to cold, ubiquitin-dependent protein catabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit E2 (TAIR:AT3G14290.1); Has 5862 Blast hits to 5858 proteins in 463 species: Archae - 870; Bacteria - 9; Metazoa - 1980; Fungi - 1345; Plants - 774; Viruses - 0; Other Eukaryotes - 884 (source: NCBI BLink). & (o24362|psa3_spiol : 150.0) Proteasome subunit alpha type 3 (EC 3.4.25.1) (20S proteasome alpha subunit G) (20S proteasome subunit alpha-7) (Proteasome component C8) - Spinacia oleracea (Spinach) & (gnl|cdd|48449 : 140.0) no description available & (gnl|cdd|35405 : 138.0) no description available & (reliability: 304.0) & (original description: Putative prtD, Description = Proteasome subunit alpha type, PFAM = PF10584;PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf10305_195342-209972' '(o24362|psa3_spiol : 307.0) Proteasome subunit alpha type 3 (EC 3.4.25.1) (20S proteasome alpha subunit G) (20S proteasome subunit alpha-7) (Proteasome component C8) - Spinacia oleracea (Spinach) & (at2g27020 : 298.0) Encodes 20S proteasome alpha 7 subunit PAG1.; 20S proteasome alpha subunit G1 (PAG1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, response to cold, ubiquitin-dependent protein catabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit E2 (TAIR:AT3G14290.1); Has 5862 Blast hits to 5858 proteins in 463 species: Archae - 870; Bacteria - 9; Metazoa - 1980; Fungi - 1345; Plants - 774; Viruses - 0; Other Eukaryotes - 884 (source: NCBI BLink). & (gnl|cdd|35405 : 270.0) no description available & (gnl|cdd|48449 : 249.0) no description available & (reliability: 596.0) & (original description: Putative pros, Description = Proteasome subunit alpha type, PFAM = PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf10438_79-12158' '(at5g09900 : 648.0) Encodes one of two isoforms for the 26S proteasome regulatory protein (RN) subunit RPN5. For many functions it acts redundantly with the paralogous gene RPN5b but also appears to exert independent effects.; EMBRYO DEFECTIVE 2107 (EMB2107); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: multicellular organismal development, ubiquitin-dependent protein catabolic process, embryo development ending in seed dormancy; LOCATED IN: proteasome complex, nucleus, proteasome regulatory particle, lid subcomplex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: regulatory particle non-ATPase subunit 5B (TAIR:AT5G64760.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36711 : 506.0) no description available & (gnl|cdd|34675 : 297.0) no description available & (reliability: 1296.0) & (original description: Putative RPN5B, Description = 26S proteasome non-ATPase regulatory subunit 12 homolog B, PFAM = PF01399)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf11078_174989-198968' '(q9m4t8|psa5_soybn : 203.0) Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S proteasome alpha subunit E) (20S proteasome subunit alpha-5) - Glycine max (Soybean) & (at3g14290 : 199.0) Encodes 20S proteasome subunit PAE2 (PAE2).; 20S proteasome alpha subunit E2 (PAE2); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit E1 (TAIR:AT1G53850.2); Has 8015 Blast hits to 8011 proteins in 570 species: Archae - 901; Bacteria - 216; Metazoa - 2770; Fungi - 1923; Plants - 1008; Viruses - 0; Other Eukaryotes - 1197 (source: NCBI BLink). & (gnl|cdd|35397 : 167.0) no description available & (gnl|cdd|48451 : 159.0) no description available & (reliability: 398.0) & (original description: Putative pup2, Description = Proteasome subunit alpha type, PFAM = PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf11232_31303-37047' '(at5g38660 : 220.0) mutant has Altered acclimation responses;; ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT (APE1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2854 (InterPro:IPR021275), Proteasome maturation factor UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana protein match is: Proteasome maturation factor UMP1 (TAIR:AT5G38650.1). & (gnl|cdd|38271 : 144.0) no description available & (gnl|cdd|68901 : 138.0) no description available & (reliability: 426.0) & (original description: Putative Sb08, Description = Putative uncharacterized protein Sb08, PFAM = PF05348)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf12083_43780-49379' '(q06364|psmd3_dauca : 582.0) Probable 26S proteasome non-ATPase regulatory subunit 3 (26S proteasome subunit S3) (Nuclear antigen 21D7) - Daucus carota (Carrot) & (at1g20200 : 561.0) EMBRYO DEFECTIVE 2719 (EMB2719); FUNCTIONS IN: enzyme regulator activity; INVOLVED IN: ubiquitin-dependent protein catabolic process, embryo development ending in seed dormancy; LOCATED IN: proteasome complex, plasma membrane, proteasome regulatory particle, lid subcomplex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143), 26S proteasome regulatory subunit, C-terminal (InterPro:IPR013586); BEST Arabidopsis thaliana protein match is: PAM domain (PCI/PINT associated module) protein (TAIR:AT1G75990.1); Has 763 Blast hits to 760 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 312; Fungi - 164; Plants - 180; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|37792 : 486.0) no description available & (reliability: 1122.0) & (original description: Putative 21D7, Description = Probable 26S proteasome non-ATPase regulatory subunit 3, PFAM = PF01399;PF08375)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf12083_49467-55962' '(p93768|psmd3_tobac : 864.0) Probable 26S proteasome non-ATPase regulatory subunit 3 (26S proteasome subunit S3) (Nuclear antigen 21D7) - Nicotiana tabacum (Common tobacco) & (at1g75990 : 709.0) PAM domain (PCI/PINT associated module) protein; FUNCTIONS IN: enzyme regulator activity; INVOLVED IN: protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome complex, plasma membrane, proteasome regulatory particle, lid subcomplex, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143), 26S proteasome regulatory subunit, C-terminal (InterPro:IPR013586); BEST Arabidopsis thaliana protein match is: PAM domain (PCI/PINT associated module) protein (TAIR:AT1G20200.1); Has 740 Blast hits to 739 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 146; Plants - 168; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|37792 : 620.0) no description available & (gnl|cdd|87512 : 105.0) no description available & (reliability: 1418.0) & (original description: Putative 21D7, Description = Probable 26S proteasome non-ATPase regulatory subunit 3, PFAM = PF08375;PF01399)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf12443_156593-164209' '(q9xg77|psa6_tobac : 483.0) Proteasome subunit alpha type 6 (EC 3.4.25.1) (20S proteasome alpha subunit A) (20S proteasome subunit alpha-1) - Nicotiana tabacum (Common tobacco) & (at2g05840 : 448.0) Encodes 20S proteasome subunit PAA2 (PAA2).; 20S proteasome subunit PAA2 (PAA2); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome; EXPRESSED IN: fruit, guard cell, cultured cell; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: proteasome alpha subunit A1 (TAIR:AT5G35590.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35403 : 398.0) no description available & (gnl|cdd|48452 : 377.0) no description available & (reliability: 896.0) & (original description: Putative PAA1, Description = Proteasome subunit alpha type-6, PFAM = PF00227;PF10584)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf12941_9658-27530' '(at1g56450 : 401.0) 20S proteasome beta subunit PBG1 (PBG1) mRNA, complete cds; 20S proteasome beta subunit G1 (PBG1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, response to salt stress, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome endopeptidase complex, beta subunit (InterPro:IPR016295), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT4G31300.2); Has 2530 Blast hits to 2530 proteins in 413 species: Archae - 597; Bacteria - 46; Metazoa - 632; Fungi - 578; Plants - 277; Viruses - 0; Other Eukaryotes - 400 (source: NCBI BLink). & (gnl|cdd|35406 : 314.0) no description available & (gnl|cdd|48458 : 286.0) no description available & (reliability: 802.0) & (original description: Putative Psb4, Description = Proteasome subunit beta type, PFAM = PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf15836_298286-317510' '(at1g56450 : 408.0) 20S proteasome beta subunit PBG1 (PBG1) mRNA, complete cds; 20S proteasome beta subunit G1 (PBG1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, response to salt stress, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome endopeptidase complex, beta subunit (InterPro:IPR016295), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT4G31300.2); Has 2530 Blast hits to 2530 proteins in 413 species: Archae - 597; Bacteria - 46; Metazoa - 632; Fungi - 578; Plants - 277; Viruses - 0; Other Eukaryotes - 400 (source: NCBI BLink). & (gnl|cdd|35406 : 318.0) no description available & (gnl|cdd|48458 : 290.0) no description available & (reliability: 816.0) & (original description: Putative PSMB4, Description = Proteasome subunit beta type-4, PFAM = PF00227)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf17496_60688-67525' '(at2g39990 : 370.0) translation initiation factor eIF2 p47 subunit homolog; eukaryotic translation initiation factor 2 (EIF2); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: pollen germination, translational initiation, embryo development; LOCATED IN: eukaryotic translation initiation factor 3 complex, nucleus, membrane, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: Mov34/MPN/PAD-1 family protein (TAIR:AT3G11270.2); Has 1103 Blast hits to 1103 proteins in 237 species: Archae - 0; Bacteria - 0; Metazoa - 465; Fungi - 269; Plants - 187; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (gnl|cdd|38186 : 334.0) no description available & (gnl|cdd|85425 : 97.7) no description available & (reliability: 740.0) & (original description: Putative TIF3F1, Description = Eukaryotic translation initiation factor 3 subunit F, PFAM = PF01398;PF13012)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf20652_1-14852' '(at5g43010 : 686.0) 26S proteasome AAA-ATPase subunit RPT4a (RPT4a) mRNA,; regulatory particle triple-A ATPase 4A (RPT4A); FUNCTIONS IN: ATPase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G45000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35870 : 554.0) no description available & (gnl|cdd|31415 : 495.0) no description available & (o64982|prs7_prupe : 323.0) 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) - Prunus persica (Peach) & (reliability: 1372.0) & (original description: Putative rpt4, Description = 26S protease regulatory subunit 10B, PFAM = PF00004)' T '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'niben101scf27265_67114-74256' '(at3g27430 : 473.0) Encodes 20S proteasome beta subunit PBB1 (PBB1).; PBB1; FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase T1A, proteasome beta-subunit (InterPro:IPR000243), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit PBB2 (TAIR:AT5G40580.3). & (gnl|cdd|35394 : 406.0) no description available & (gnl|cdd|48461 : 347.0) no description available & (p93395|psb6_tobac : 107.0) Proteasome subunit beta type 6 precursor (EC 3.4.25.1) (Proteasome delta chain) (Tobacco cryptogein-induced protein 7) (tcI 7) - Nicotiana tabacum (Common tobacco) & (reliability: 946.0) & (original description: Putative PBB1, Description = Proteasome subunit beta type-7-A, PFAM = PF00227)' T '29.5.30' 'protein.degradation.prolyl protease' '' '' '29.5.31' 'protein.degradation.alanine protease' '' '' '29.6' 'protein.folding' 'nbv0.3scaffold6939_1-3850' '(at5g55200 : 148.0) Co-chaperone GrpE family protein; FUNCTIONS IN: copper ion binding, ATP binding; INVOLVED IN: protein folding, protein import into mitochondrial matrix; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GrpE nucleotide exchange factor (InterPro:IPR000740), GrpE nucleotide exchange factor, head (InterPro:IPR009012), GrpE nucleotide exchange factor, coiled-coil (InterPro:IPR013805); BEST Arabidopsis thaliana protein match is: Co-chaperone GrpE family protein (TAIR:AT4G26780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38213 : 95.9) no description available & (reliability: 296.0) & (original description: Putative AR192, Description = GrpE protein homolog, PFAM = PF01025)' T '29.6' 'protein.folding' 'nbv0.3scaffold14583_1657-10347' '(at5g42000 : 249.0) ORMDL family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding; LOCATED IN: integral to membrane, endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ORMDL (InterPro:IPR007203); BEST Arabidopsis thaliana protein match is: ORMDL family protein (TAIR:AT1G01230.1); Has 531 Blast hits to 531 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 274; Fungi - 143; Plants - 90; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|38529 : 197.0) no description available & (gnl|cdd|67668 : 183.0) no description available & (reliability: 498.0) & (original description: Putative At5g42000, Description = At5g42000, PFAM = PF04061)' T '29.6' 'protein.folding' 'nbv0.3scaffold16727_6654-16606' '(gnl|cdd|48153 : 888.0) no description available & (at5g20890 : 867.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: anchored to plasma membrane, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), T-complex protein 1, beta subunit (InterPro:IPR012716), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G11830.1); Has 19831 Blast hits to 19435 proteins in 3922 species: Archae - 807; Bacteria - 9602; Metazoa - 2181; Fungi - 1427; Plants - 861; Viruses - 0; Other Eukaryotes - 4953 (source: NCBI BLink). & (gnl|cdd|35584 : 840.0) no description available & (p54411|tcpe2_avesa : 270.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1734.0) & (original description: Putative cct2, Description = Chaperonin containing TCP1, subunit 2 (Beta), PFAM = PF00118)' T '29.6' 'protein.folding' 'nbv0.3scaffold26034_22643-26607' '(p26413|hsp70_soybn : 982.0) Heat shock 70 kDa protein - Glycine max (Soybean) & (at1g16030 : 974.0) heat shock protein 70B (Hsp70b); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: cytosol, cell wall, plasma membrane, chloroplast, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (TAIR:AT3G12580.1); Has 33913 Blast hits to 33562 proteins in 4835 species: Archae - 164; Bacteria - 16454; Metazoa - 3784; Fungi - 1785; Plants - 1262; Viruses - 309; Other Eukaryotes - 10155 (source: NCBI BLink). & (gnl|cdd|84440 : 891.0) no description available & (gnl|cdd|35323 : 889.0) no description available & (reliability: 1868.0) & (original description: Putative SSA3, Description = Heat shock protein SSA3, PFAM = PF00012)' T '29.6' 'protein.folding' 'nbv0.3scaffold30998_6368-14944' '(gnl|cdd|48153 : 670.0) no description available & (at5g20890 : 643.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: anchored to plasma membrane, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), T-complex protein 1, beta subunit (InterPro:IPR012716), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G11830.1); Has 19831 Blast hits to 19435 proteins in 3922 species: Archae - 807; Bacteria - 9602; Metazoa - 2181; Fungi - 1427; Plants - 861; Viruses - 0; Other Eukaryotes - 4953 (source: NCBI BLink). & (gnl|cdd|35584 : 635.0) no description available & (p54411|tcpe2_avesa : 190.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1286.0) & (original description: Putative cct2, Description = T-complex protein 1 subunit beta, PFAM = PF00118)' T '29.6' 'protein.folding' 'nbv0.3scaffold31651_71-8114' '(at5g17710 : 173.0) embryo defective 1241 (EMB1241); FUNCTIONS IN: copper ion binding; INVOLVED IN: protein folding, embryo development ending in seed dormancy; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GrpE nucleotide exchange factor (InterPro:IPR000740), GrpE nucleotide exchange factor, coiled-coil (InterPro:IPR013805), GrpE nucleotide exchange factor, head (InterPro:IPR009012); BEST Arabidopsis thaliana protein match is: Co-chaperone GrpE family protein (TAIR:AT1G36390.2); Has 8394 Blast hits to 8358 proteins in 2682 species: Archae - 138; Bacteria - 5138; Metazoa - 231; Fungi - 167; Plants - 159; Viruses - 7; Other Eukaryotes - 2554 (source: NCBI BLink). & (gnl|cdd|30921 : 144.0) no description available & (gnl|cdd|38213 : 89.3) no description available & (reliability: 346.0) & (original description: Putative grpE, Description = Protein GrpE, PFAM = PF01025)' T '29.6' 'protein.folding' 'nbv0.3scaffold33812_1-13267' '(at5g49510 : 261.0) prefoldin 3 (PFD3); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin alpha-like (InterPro:IPR004127), Prefoldin (InterPro:IPR009053), Prefoldin, subunit 3 (InterPro:IPR016655); Has 406 Blast hits to 406 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 158; Fungi - 133; Plants - 37; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (gnl|cdd|38523 : 202.0) no description available & (gnl|cdd|86212 : 81.8) no description available & (reliability: 522.0) & (original description: Putative PFD3, Description = Prefoldin subunit 3, PFAM = PF02996)' T '29.6' 'protein.folding' 'nbv0.3scaffold34412_1-9987' '(at5g13410 : 325.0) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT4G19830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35772 : 119.0) no description available & (reliability: 650.0) & (original description: Putative FBP19, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00254)' T '29.6' 'protein.folding' 'nbv0.3scaffold41421_4060-10648' '(at2g43560 : 261.0) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FK506-binding protein 13 (TAIR:AT5G45680.1); Has 8823 Blast hits to 8572 proteins in 1646 species: Archae - 42; Bacteria - 4685; Metazoa - 1489; Fungi - 464; Plants - 749; Viruses - 0; Other Eukaryotes - 1394 (source: NCBI BLink). & (gnl|cdd|35772 : 131.0) no description available & (gnl|cdd|30891 : 102.0) no description available & (reliability: 522.0) & (original description: Putative fbp, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00254)' T '29.6' 'protein.folding' 'nbv0.3scaffold44483_8103-15510' '(at3g60370 : 264.0) Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined.; FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, oxidoreductase activity, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: photosystem II assembly; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT4G19830.1); Has 7131 Blast hits to 6812 proteins in 1455 species: Archae - 6; Bacteria - 3821; Metazoa - 1227; Fungi - 400; Plants - 644; Viruses - 0; Other Eukaryotes - 1033 (source: NCBI BLink). & (gnl|cdd|35772 : 85.9) no description available & (gnl|cdd|30891 : 85.1) no description available & (reliability: 528.0) & (original description: Putative FKBP20-2, Description = Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic, PFAM = PF00254)' T '29.6' 'protein.folding' 'nbv0.3scaffold44926_12638-17208' '(at1g75690 : 176.0) DnaJ/Hsp40 cysteine-rich domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 581 Blast hits to 563 proteins in 197 species: Archae - 4; Bacteria - 299; Metazoa - 12; Fungi - 21; Plants - 163; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative SPA, Description = Protein SPA, chloroplastic, PFAM = )' T '29.6' 'protein.folding' 'nbv0.3scaffold50369_9741-15043' '(at4g26555 : 109.0) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT4G19830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative T15N24, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = )' T '29.6' 'protein.folding' 'nbv0.3scaffold52461_5979-13423' '(at3g10060 : 286.0) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT1G20810.1); Has 8406 Blast hits to 7908 proteins in 1571 species: Archae - 44; Bacteria - 4267; Metazoa - 1616; Fungi - 433; Plants - 872; Viruses - 0; Other Eukaryotes - 1174 (source: NCBI BLink). & (gnl|cdd|35772 : 144.0) no description available & (gnl|cdd|30891 : 105.0) no description available & (reliability: 572.0) & (original description: Putative fkpB, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00254)' T '29.6' 'protein.folding' 'nbv0.3scaffold54705_12595-14944' '(p09189|hsp7c_pethy : 191.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at5g02500 : 189.0) encodes a member of heat shock protein 70 family.; heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cold, response to virus, response to heat; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35324 : 149.0) no description available & (gnl|cdd|84440 : 131.0) no description available & (reliability: 378.0) & (original description: Putative hsc1, Description = Heat shock protein 70, PFAM = PF00012)' T '29.6' 'protein.folding' 'nbv0.3scaffold54900_9669-13481' '(at4g39710 : 237.0) FK506-binding protein 16-2 (FKBP16-2); FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: chloroplast thylakoid membrane, chloroplast thylakoid lumen; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FK506-binding protein 13 (TAIR:AT5G45680.1). & (gnl|cdd|30891 : 109.0) no description available & (gnl|cdd|35769 : 108.0) no description available & (reliability: 474.0) & (original description: Putative FKBP13, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00254)' T '29.6' 'protein.folding' 'nbv0.3scaffold55745_5258-11623' '(at5g48570 : 480.0) FKBP-type peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity, calmodulin binding; INVOLVED IN: protein folding; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: rotamase FKBP 1 (TAIR:AT3G25230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43207|fkb70_wheat : 457.0) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) & (gnl|cdd|35763 : 227.0) no description available & (gnl|cdd|30891 : 124.0) no description available & (reliability: 922.0) & (original description: Putative FKBP65, Description = Peptidyl-prolyl cis-trans isomerase FKBP65, PFAM = PF00515;PF00254;PF00254;PF00254)' T '29.6' 'protein.folding' 'nbv0.3scaffold82803_1-6633' '(at5g42000 : 266.0) ORMDL family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding; LOCATED IN: integral to membrane, endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ORMDL (InterPro:IPR007203); BEST Arabidopsis thaliana protein match is: ORMDL family protein (TAIR:AT1G01230.1); Has 531 Blast hits to 531 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 274; Fungi - 143; Plants - 90; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|38529 : 200.0) no description available & (gnl|cdd|67668 : 185.0) no description available & (reliability: 532.0) & (original description: Putative At5g42000, Description = At5g42000, PFAM = PF04061)' T '29.6' 'protein.folding' 'nbv0.5scaffold432_36728-40406' '(at3g06778 : 102.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G19570.1); Has 18848 Blast hits to 18845 proteins in 3064 species: Archae - 137; Bacteria - 8171; Metazoa - 3106; Fungi - 1452; Plants - 1923; Viruses - 12; Other Eukaryotes - 4047 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative , Description = , PFAM = PF00226)' T '29.6' 'protein.folding' 'nbv0.5scaffold456_467547-471019' '(at5g02500 : 725.0) encodes a member of heat shock protein 70 family.; heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cold, response to virus, response to heat; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p09189|hsp7c_pethy : 718.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (gnl|cdd|84440 : 610.0) no description available & (gnl|cdd|35323 : 607.0) no description available & (reliability: 1450.0) & (original description: Putative hspB, Description = Heat shock protein 70, PFAM = PF00012)' T '29.6' 'protein.folding' 'nbv0.5scaffold636_334192-342331' '(at4g25340 : 291.0) Encodes a member of the FKBP-type immunophilin family that functions as a histone chaparone. Binds to 18S rDNA and represses its expression.; FK506 BINDING PROTEIN 53 (FKBP53); CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT5G05420.1). & (gnl|cdd|35772 : 136.0) no description available & (gnl|cdd|30891 : 128.0) no description available & (q41649|fkb15_vicfa : 89.4) FK506-binding protein 2 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (15 kDa FKBP) (FKBP-15) - Vicia faba (Broad bean) & (reliability: 582.0) & (original description: Putative FKBP53, Description = Peptidyl-prolyl cis-trans isomerase FKBP53, PFAM = PF00254)' T '29.6' 'protein.folding' 'nbv0.5scaffold870_17925-30179' '(at5g26360 : 934.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), T-complex protein 1, gamma subunit (InterPro:IPR012719), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G11830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|73351 : 771.0) no description available & (gnl|cdd|35585 : 731.0) no description available & (p54411|tcpe2_avesa : 263.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1868.0) & (original description: Putative CCT3, Description = T-complex protein 1 subunit gamma, PFAM = PF00118)' T '29.6' 'protein.folding' 'nbv0.5scaffold904_128365-164027' '(at1g20810 : 230.0) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid lumen, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G10060.1); Has 1763 Blast hits to 1744 proteins in 606 species: Archae - 0; Bacteria - 1027; Metazoa - 95; Fungi - 57; Plants - 263; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink). & (gnl|cdd|35772 : 111.0) no description available & (reliability: 460.0) & (original description: Putative FKBP18, Description = Peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic, PFAM = PF00254)' T '29.6' 'protein.folding' 'nbv0.5scaffold958_445671-452900' '(at4g26555 : 236.0) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT4G19830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative BnaA03g48100D, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00254)' T '29.6' 'protein.folding' 'nbv0.5scaffold1579_153165-159172' '(at3g25230 : 738.0) Encodes a a high molecular weight member of the FK506 binding protein (FKBP) family. It has three FKBP12-like domains, tetratricopeptide repeats, and a putative calmodulin binding domain. Modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs.; rotamase FKBP 1 (ROF1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-type peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT5G48570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43207|fkb70_wheat : 683.0) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) & (gnl|cdd|35763 : 293.0) no description available & (gnl|cdd|84647 : 138.0) no description available & (reliability: 1476.0) & (original description: Putative FKBP62, Description = Peptidyl-prolyl cis-trans isomerase FKBP62, PFAM = PF00254;PF00254;PF00254;PF00515)' T '29.6' 'protein.folding' 'nbv0.5scaffold2381_57407-64197' '(at3g23990 : 859.0) mitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria.; heat shock protein 60 (HSP60); FUNCTIONS IN: copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, response to cyclopentenone, chaperone-mediated protein complex assembly, response to heat, mitochondrion organization; LOCATED IN: cytosol, cytosolic ribosome, mitochondrion, plasma membrane, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: heat shock protein 60-2 (TAIR:AT2G33210.1); Has 33706 Blast hits to 33652 proteins in 8680 species: Archae - 676; Bacteria - 21745; Metazoa - 1618; Fungi - 1515; Plants - 790; Viruses - 2; Other Eukaryotes - 7360 (source: NCBI BLink). & (q05046|ch62_cucma : 858.0) Chaperonin CPN60-2, mitochondrial precursor (HSP60-2) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|48161 : 758.0) no description available & (gnl|cdd|35577 : 660.0) no description available & (reliability: 1718.0) & (original description: Putative acnA, Description = Protein Cpn60, PFAM = PF00118)' T '29.6' 'protein.folding' 'nbv0.5scaffold4157_203704-206198' '(at5g20720 : 185.0) Encodes a chloroplast co-chaperonin with similarity to CPN21 from spinach, E.coli GroES.; chaperonin 20 (CPN20); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn10 (InterPro:IPR020818), GroES-like (InterPro:IPR011032), Chaperonin Cpn10, conserved site (InterPro:IPR018369), Chaperonin 21, chloroplast (InterPro:IPR017416), Chaperonin Cpn10, subgroup (InterPro:IPR001476); BEST Arabidopsis thaliana protein match is: chaperonin 10 (TAIR:AT1G14980.1). & (q02073|ch10c_spiol : 167.0) 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10) - Spinacia oleracea (Spinach) & (gnl|cdd|80634 : 92.4) no description available & (gnl|cdd|36854 : 84.6) no description available & (reliability: 370.0) & (original description: Putative cp10, Description = 10 kDa chaperonin, PFAM = PF00166;PF00166)' T '29.6' 'protein.folding' 'nbv0.5scaffold4753_124255-130344' '(at2g43560 : 201.0) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FK506-binding protein 13 (TAIR:AT5G45680.1); Has 8823 Blast hits to 8572 proteins in 1646 species: Archae - 42; Bacteria - 4685; Metazoa - 1489; Fungi - 464; Plants - 749; Viruses - 0; Other Eukaryotes - 1394 (source: NCBI BLink). & (gnl|cdd|35772 : 113.0) no description available & (gnl|cdd|30891 : 89.7) no description available & (reliability: 402.0) & (original description: Putative FKBP, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00254)' T '29.6' 'protein.folding' 'nbv0.5scaffold6606_70643-79437' '(at3g17668 : 114.0) ENHANCER OF ATNSI ACTIVITY (ENA); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 136 Blast hits to 128 proteins in 43 species: Archae - 2; Bacteria - 19; Metazoa - 39; Fungi - 2; Plants - 45; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative , Description = Protein disulfide-isomerase LQY1-like protein, PFAM = )' T '29.6' 'protein.folding' 'nbv0.5scaffold8318_1687-5563' '(p09189|hsp7c_pethy : 566.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at3g12580 : 565.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (gnl|cdd|84440 : 520.0) no description available & (gnl|cdd|35323 : 492.0) no description available & (reliability: 1130.0) & (original description: Putative hspB, Description = Heat shock protein 70, PFAM = PF00012)' T '29.6' 'protein.folding' 'nbv0.5scaffold9206_4472-14002' '(at4g19830 : 265.0) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: chloroplast thylakoid lumen; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT4G26555.1); Has 5413 Blast hits to 5325 proteins in 1280 species: Archae - 56; Bacteria - 2447; Metazoa - 955; Fungi - 366; Plants - 719; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (gnl|cdd|35772 : 117.0) no description available & (reliability: 530.0) & (original description: Putative BnaA08g09340D, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00254)' T '29.6' 'protein.folding' 'niben044scf00007473ctg017_152-2783' '(at5g17710 : 188.0) embryo defective 1241 (EMB1241); FUNCTIONS IN: copper ion binding; INVOLVED IN: protein folding, embryo development ending in seed dormancy; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GrpE nucleotide exchange factor (InterPro:IPR000740), GrpE nucleotide exchange factor, coiled-coil (InterPro:IPR013805), GrpE nucleotide exchange factor, head (InterPro:IPR009012); BEST Arabidopsis thaliana protein match is: Co-chaperone GrpE family protein (TAIR:AT1G36390.2); Has 8394 Blast hits to 8358 proteins in 2682 species: Archae - 138; Bacteria - 5138; Metazoa - 231; Fungi - 167; Plants - 159; Viruses - 7; Other Eukaryotes - 2554 (source: NCBI BLink). & (gnl|cdd|30921 : 86.9) no description available & (reliability: 376.0) & (original description: Putative grpE, Description = GrpE protein homolog, PFAM = PF01025)' T '29.6' 'protein.folding' 'niben044scf00007841ctg008_710-7242' '(at3g03960 : 504.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin TCP-1, conserved site (InterPro:IPR002194), T-complex protein 1, theta subunit (InterPro:IPR012721); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G18190.1); Has 15495 Blast hits to 15419 proteins in 3442 species: Archae - 801; Bacteria - 7598; Metazoa - 1836; Fungi - 1369; Plants - 680; Viruses - 0; Other Eukaryotes - 3211 (source: NCBI BLink). & (gnl|cdd|35583 : 381.0) no description available & (gnl|cdd|73352 : 361.0) no description available & (p54411|tcpe2_avesa : 123.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1008.0) & (original description: Putative DaCCT8, Description = Chaperonin theta subunit, PFAM = PF00118)' T '29.6' 'protein.folding' 'niben044scf00007841ctg009_1-5674' '(at3g03960 : 357.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin TCP-1, conserved site (InterPro:IPR002194), T-complex protein 1, theta subunit (InterPro:IPR012721); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G18190.1); Has 15495 Blast hits to 15419 proteins in 3442 species: Archae - 801; Bacteria - 7598; Metazoa - 1836; Fungi - 1369; Plants - 680; Viruses - 0; Other Eukaryotes - 3211 (source: NCBI BLink). & (gnl|cdd|73352 : 315.0) no description available & (gnl|cdd|35583 : 282.0) no description available & (reliability: 714.0) & (original description: Putative cct8, Description = T-complex protein 1 subunit theta, PFAM = PF00118)' T '29.6' 'protein.folding' 'niben044scf00008462ctg002_5739-18745' '(at5g12430 : 546.0) Heat shock protein DnaJ with tetratricopeptide repeat; FUNCTIONS IN: heat shock protein binding, binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Heat shock protein DnaJ with tetratricopeptide repeat (TAIR:AT2G41520.1); Has 27844 Blast hits to 24585 proteins in 3132 species: Archae - 222; Bacteria - 9738; Metazoa - 5941; Fungi - 3019; Plants - 3250; Viruses - 11; Other Eukaryotes - 5663 (source: NCBI BLink). & (gnl|cdd|35770 : 138.0) no description available & (reliability: 1092.0) & (original description: Putative BnaA10g30100D, Description = BnaA10g30100D protein, PFAM = PF00226)' T '29.6' 'protein.folding' 'niben044scf00010973ctg002_1-5917' '(q05046|ch62_cucma : 918.0) Chaperonin CPN60-2, mitochondrial precursor (HSP60-2) - Cucurbita maxima (Pumpkin) (Winter squash) & (at3g23990 : 904.0) mitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria.; heat shock protein 60 (HSP60); FUNCTIONS IN: copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, response to cyclopentenone, chaperone-mediated protein complex assembly, response to heat, mitochondrion organization; LOCATED IN: cytosol, cytosolic ribosome, mitochondrion, plasma membrane, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: heat shock protein 60-2 (TAIR:AT2G33210.1); Has 33706 Blast hits to 33652 proteins in 8680 species: Archae - 676; Bacteria - 21745; Metazoa - 1618; Fungi - 1515; Plants - 790; Viruses - 2; Other Eukaryotes - 7360 (source: NCBI BLink). & (gnl|cdd|48161 : 777.0) no description available & (gnl|cdd|35577 : 688.0) no description available & (reliability: 1808.0) & (original description: Putative acnA, Description = Protein Cpn60, PFAM = PF00118)' T '29.6' 'protein.folding' 'niben044scf00011567ctg001_1402-8809' '(at3g60370 : 264.0) Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined.; FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, oxidoreductase activity, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: photosystem II assembly; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT4G19830.1); Has 7131 Blast hits to 6812 proteins in 1455 species: Archae - 6; Bacteria - 3821; Metazoa - 1227; Fungi - 400; Plants - 644; Viruses - 0; Other Eukaryotes - 1033 (source: NCBI BLink). & (gnl|cdd|35772 : 85.9) no description available & (gnl|cdd|30891 : 84.7) no description available & (reliability: 528.0) & (original description: Putative FKBP20-2, Description = Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic, PFAM = PF00254)' T '29.6' 'protein.folding' 'niben044scf00012304ctg010_1281-10934' '(at3g15120 : 1214.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: cell division cycle protein 48-related / CDC48-related (TAIR:AT1G05910.1); Has 80986 Blast hits to 58843 proteins in 3591 species: Archae - 1718; Bacteria - 20912; Metazoa - 22400; Fungi - 8848; Plants - 5536; Viruses - 480; Other Eukaryotes - 21092 (source: NCBI BLink). & (gnl|cdd|35951 : 482.0) no description available & (gnl|cdd|30812 : 223.0) no description available & (p54774|cdc48_soybn : 200.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 2428.0) & (original description: Putative pi026, Description = ATPase family AAA domain-containing protein 2B, PFAM = PF13771;PF00004)' T '29.6' 'protein.folding' 'niben044scf00014417ctg003_1-4984' '(at4g26555 : 228.0) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT4G19830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative Sb04g006780, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00254)' T '29.6' 'protein.folding' 'niben044scf00016495ctg017_1894-5135' '(at5g55220 : 100.0) trigger factor type chaperone family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, C-terminal, bacterial (InterPro:IPR008880), Trigger factor (InterPro:IPR005215), Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative TIG, Description = Trigger factor type chaperone family protein, PFAM = PF05698)' T '29.6' 'protein.folding' 'niben044scf00019145ctg001_2681-9720' '(q05046|ch62_cucma : 850.0) Chaperonin CPN60-2, mitochondrial precursor (HSP60-2) - Cucurbita maxima (Pumpkin) (Winter squash) & (at3g23990 : 847.0) mitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria.; heat shock protein 60 (HSP60); FUNCTIONS IN: copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, response to cyclopentenone, chaperone-mediated protein complex assembly, response to heat, mitochondrion organization; LOCATED IN: cytosol, cytosolic ribosome, mitochondrion, plasma membrane, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: heat shock protein 60-2 (TAIR:AT2G33210.1); Has 33706 Blast hits to 33652 proteins in 8680 species: Archae - 676; Bacteria - 21745; Metazoa - 1618; Fungi - 1515; Plants - 790; Viruses - 2; Other Eukaryotes - 7360 (source: NCBI BLink). & (gnl|cdd|48161 : 744.0) no description available & (gnl|cdd|35577 : 650.0) no description available & (reliability: 1694.0) & (original description: Putative acnA, Description = Protein Cpn60, PFAM = PF00118)' T '29.6' 'protein.folding' 'niben044scf00019265ctg001_9985-12269' '(at5g43260 : 111.0) chaperone protein dnaJ-related; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative At5g43260, Description = Chaperone protein dnaJ-like protein, PFAM = )' T '29.6' 'protein.folding' 'niben044scf00020865ctg002_1-2368' '(at3g60210 : 187.0) GroES-like family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn10 (InterPro:IPR020818), GroES-like (InterPro:IPR011032), Chaperonin Cpn10, subgroup (InterPro:IPR001476); BEST Arabidopsis thaliana protein match is: chloroplast chaperonin 10 (TAIR:AT2G44650.1); Has 3302 Blast hits to 3296 proteins in 900 species: Archae - 7; Bacteria - 1960; Metazoa - 11; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 1153 (source: NCBI BLink). & (gnl|cdd|36854 : 94.2) no description available & (reliability: 374.0) & (original description: Putative cpn10, Description = Chloroplast chaperonin 10, PFAM = PF00166)' T '29.6' 'protein.folding' 'niben044scf00022232ctg001_431-3893' '(at3g18190 : 824.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin TCP-1, conserved site (InterPro:IPR002194), T-complex protein 1, delta subunit (InterPro:IPR012717); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT1G24510.1); Has 19273 Blast hits to 19203 proteins in 3973 species: Archae - 808; Bacteria - 9512; Metazoa - 2051; Fungi - 1477; Plants - 841; Viruses - 2; Other Eukaryotes - 4582 (source: NCBI BLink). & (gnl|cdd|48155 : 816.0) no description available & (gnl|cdd|35579 : 782.0) no description available & (p54411|tcpe2_avesa : 269.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1648.0) & (original description: Putative CCT4, Description = T-complex protein 1 subunit delta, PFAM = PF00118)' T '29.6' 'protein.folding' 'niben044scf00022307ctg004_44200-49643' '(p09189|hsp7c_pethy : 784.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at5g02500 : 775.0) encodes a member of heat shock protein 70 family.; heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cold, response to virus, response to heat; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84440 : 684.0) no description available & (gnl|cdd|35323 : 660.0) no description available & (reliability: 1550.0) & (original description: Putative hspB, Description = Heat shock protein 70, PFAM = PF00012)' T '29.6' 'protein.folding' 'niben044scf00026501ctg007_4808-11798' '(at3g12340 : 249.0) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: chloroplast thylakoid lumen; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FK506 BINDING PROTEIN 53 (TAIR:AT4G25340.1); Has 13564 Blast hits to 11813 proteins in 1771 species: Archae - 96; Bacteria - 5418; Metazoa - 3305; Fungi - 956; Plants - 1045; Viruses - 29; Other Eukaryotes - 2715 (source: NCBI BLink). & (gnl|cdd|35772 : 122.0) no description available & (gnl|cdd|30891 : 102.0) no description available & (reliability: 498.0) & (original description: Putative FKB53, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00254)' T '29.6' 'protein.folding' 'niben044scf00028762ctg011_210-3774' '(at5g48570 : 192.0) FKBP-type peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity, calmodulin binding; INVOLVED IN: protein folding; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: rotamase FKBP 1 (TAIR:AT3G25230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43207|fkb70_wheat : 178.0) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) & (gnl|cdd|35763 : 95.0) no description available & (gnl|cdd|84647 : 84.1) no description available & (reliability: 348.0) & (original description: Putative ROF1, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00254;PF00254)' T '29.6' 'protein.folding' 'niben044scf00031145ctg000_1-9729' '(at5g13410 : 320.0) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT4G19830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35772 : 123.0) no description available & (reliability: 640.0) & (original description: Putative FKBP19, Description = Peptidyl-prolyl cis-trans isomerase FKBP19, chloroplastic, PFAM = PF00254)' T '29.6' 'protein.folding' 'niben044scf00034779ctg001_1-7265' '(at4g25340 : 274.0) Encodes a member of the FKBP-type immunophilin family that functions as a histone chaparone. Binds to 18S rDNA and represses its expression.; FK506 BINDING PROTEIN 53 (FKBP53); CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT5G05420.1). & (gnl|cdd|35772 : 130.0) no description available & (gnl|cdd|30891 : 123.0) no description available & (q41649|fkb15_vicfa : 89.0) FK506-binding protein 2 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (15 kDa FKBP) (FKBP-15) - Vicia faba (Broad bean) & (reliability: 548.0) & (original description: Putative FKBP53, Description = Peptidyl-prolyl cis-trans isomerase FKBP53, PFAM = PF00254)' T '29.6' 'protein.folding' 'niben044scf00034791ctg000_322-4932' '(at3g13470 : 787.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, protein refolding, cellular protein metabolic process; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: chaperonin 60 beta (TAIR:AT1G55490.2); Has 34219 Blast hits to 34175 proteins in 8725 species: Archae - 803; Bacteria - 21843; Metazoa - 1743; Fungi - 1612; Plants - 836; Viruses - 2; Other Eukaryotes - 7380 (source: NCBI BLink). & (p21241|rubb_brana : 785.0) RuBisCO large subunit-binding protein subunit beta, chloroplast precursor (60 kDa chaperonin subunit beta) (CPN-60 beta) - Brassica napus (Rape) & (gnl|cdd|48161 : 668.0) no description available & (gnl|cdd|35577 : 569.0) no description available & (reliability: 1574.0) & (original description: Putative cpnL, Description = 60 kDa chaperonin, PFAM = PF00118)' T '29.6' 'protein.folding' 'niben044scf00043503ctg006_5055-10801' '(at4g26780 : 244.0) unknown function; AR192; FUNCTIONS IN: copper ion binding; INVOLVED IN: protein folding, protein import into mitochondrial matrix; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GrpE nucleotide exchange factor (InterPro:IPR000740), GrpE nucleotide exchange factor, head (InterPro:IPR009012), GrpE nucleotide exchange factor, coiled-coil (InterPro:IPR013805); BEST Arabidopsis thaliana protein match is: Co-chaperone GrpE family protein (TAIR:AT5G55200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38213 : 186.0) no description available & (gnl|cdd|85192 : 153.0) no description available & (reliability: 488.0) & (original description: Putative AR192, Description = GrpE protein homolog, PFAM = PF01025)' T '29.6' 'protein.folding' 'niben044scf00054171ctg001_5094-10878' '(at2g38000 : 554.0) chaperone protein dnaJ-related; Has 1004 Blast hits to 976 proteins in 392 species: Archae - 24; Bacteria - 688; Metazoa - 92; Fungi - 4; Plants - 51; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink). & (gnl|cdd|38024 : 376.0) no description available & (reliability: 1108.0) & (original description: Putative)' T '29.6' 'protein.folding' 'niben044scf00057302ctg000_1-10718' '(gnl|cdd|48157 : 934.0) no description available & (at3g11830 : 902.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), T-complex protein 1, eta subunit (InterPro:IPR012720), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: T-complex protein 1 alpha subunit (TAIR:AT3G20050.1). & (gnl|cdd|35582 : 879.0) no description available & (p54411|tcpe2_avesa : 243.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1804.0) & (original description: Putative CCT7, Description = T-complex protein 1 subunit eta, PFAM = PF00118)' T '29.6' 'protein.folding' 'niben101scf00077_562992-569357' '(at5g48570 : 448.0) FKBP-type peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity, calmodulin binding; INVOLVED IN: protein folding; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: rotamase FKBP 1 (TAIR:AT3G25230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43207|fkb70_wheat : 435.0) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) & (gnl|cdd|35763 : 223.0) no description available & (gnl|cdd|30891 : 124.0) no description available & (reliability: 870.0) & (original description: Putative FKBP62, Description = Peptidyl-prolyl cis-trans isomerase FKBP62, PFAM = PF00515;PF00254;PF00254;PF00254)' T '29.6' 'protein.folding' 'niben101scf00087_156505-163540' '(at2g24395 : 122.0) chaperone protein dnaJ-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 31 Blast hits to 31 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative)' T '29.6' 'protein.folding' 'niben101scf00215_14850-24988' '(at5g17710 : 255.0) embryo defective 1241 (EMB1241); FUNCTIONS IN: copper ion binding; INVOLVED IN: protein folding, embryo development ending in seed dormancy; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GrpE nucleotide exchange factor (InterPro:IPR000740), GrpE nucleotide exchange factor, coiled-coil (InterPro:IPR013805), GrpE nucleotide exchange factor, head (InterPro:IPR009012); BEST Arabidopsis thaliana protein match is: Co-chaperone GrpE family protein (TAIR:AT1G36390.2); Has 8394 Blast hits to 8358 proteins in 2682 species: Archae - 138; Bacteria - 5138; Metazoa - 231; Fungi - 167; Plants - 159; Viruses - 7; Other Eukaryotes - 2554 (source: NCBI BLink). & (gnl|cdd|30921 : 141.0) no description available & (gnl|cdd|38213 : 115.0) no description available & (reliability: 510.0) & (original description: Putative grpE, Description = GrpE protein homolog, PFAM = PF01025)' T '29.6' 'protein.folding' 'niben101scf00293_536915-547857' '(at2g30410 : 132.0) mutant has embryo defect; enlarged embryo cells and endosperm nuclei; Tubulin Folding Cofactor A; KIESEL (KIS); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: tubulin complex assembly, cytokinesis; LOCATED IN: microtubule; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tubulin binding cofactor A (InterPro:IPR004226). & (gnl|cdd|38680 : 83.9) no description available & (reliability: 264.0) & (original description: Putative TFCA, Description = Tubulin-folding cofactor A, PFAM = PF02970)' T '29.6' 'protein.folding' 'niben101scf00360_360261-365139' '(at2g24395 : 114.0) chaperone protein dnaJ-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 31 Blast hits to 31 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative)' T '29.6' 'protein.folding' 'niben101scf00381_308205-311342' '(at5g55220 : 111.0) trigger factor type chaperone family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, C-terminal, bacterial (InterPro:IPR008880), Trigger factor (InterPro:IPR005215), Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative TIG, Description = Trigger factor type chaperone family protein, PFAM = PF05698)' T '29.6' 'protein.folding' 'niben101scf00397_13021-26616' '(gnl|cdd|48152 : 874.0) no description available & (at3g20050 : 847.0) Encodes a putative cytoplasmic chaperonin that is similar to mouse Tcp-1 (t complex polypeptide 1).; T-complex protein 1 alpha subunit (TCP-1); FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin TCP-1, conserved site (InterPro:IPR002194), T-complex protein 1, alpha subunit (InterPro:IPR012715); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G11830.1); Has 17155 Blast hits to 17114 proteins in 3594 species: Archae - 808; Bacteria - 7960; Metazoa - 2159; Fungi - 1408; Plants - 801; Viruses - 0; Other Eukaryotes - 4019 (source: NCBI BLink). & (gnl|cdd|35581 : 719.0) no description available & (p54411|tcpe2_avesa : 226.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1694.0) & (original description: Putative CCT1, Description = T-complex protein 1 subunit alpha, PFAM = PF00118)' T '29.6' 'protein.folding' 'niben101scf00430_87642-103588' '(at1g17350 : 377.0) NADH:ubiquinone oxidoreductase intermediate-associated protein 30; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (InterPro:IPR013857); BEST Arabidopsis thaliana protein match is: NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (TAIR:AT1G72420.1); Has 442 Blast hits to 442 proteins in 172 species: Archae - 0; Bacteria - 91; Metazoa - 109; Fungi - 74; Plants - 102; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|37646 : 219.0) no description available & (gnl|cdd|87565 : 150.0) no description available & (reliability: 718.0) & (original description: Putative At1g17350, Description = Probable complex I intermediate-associated protein 30, PFAM = PF08547)' T '29.6' 'protein.folding' 'niben101scf00449_697631-702498' '(p09189|hsp7c_pethy : 1098.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at5g02500 : 1095.0) encodes a member of heat shock protein 70 family.; heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cold, response to virus, response to heat; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35323 : 905.0) no description available & (gnl|cdd|84440 : 898.0) no description available & (reliability: 2190.0) & (original description: Putative HSP70, Description = Heat shock cognate 70 kDa protein, PFAM = PF00012)' T '29.6' 'protein.folding' 'niben101scf00682_486310-494340' '(at3g10060 : 254.0) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT1G20810.1); Has 8406 Blast hits to 7908 proteins in 1571 species: Archae - 44; Bacteria - 4267; Metazoa - 1616; Fungi - 433; Plants - 872; Viruses - 0; Other Eukaryotes - 1174 (source: NCBI BLink). & (gnl|cdd|35772 : 135.0) no description available & (gnl|cdd|30891 : 97.8) no description available & (reliability: 508.0) & (original description: Putative fkpB, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00254)' T '29.6' 'protein.folding' 'niben101scf00712_663502-671001' '(at1g20810 : 247.0) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid lumen, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G10060.1); Has 1763 Blast hits to 1744 proteins in 606 species: Archae - 0; Bacteria - 1027; Metazoa - 95; Fungi - 57; Plants - 263; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink). & (gnl|cdd|35772 : 110.0) no description available & (reliability: 494.0) & (original description: Putative PPI, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00254)' T '29.6' 'protein.folding' 'niben101scf00894_151296-160628' '(at3g02530 : 929.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: response to cadmium ion, response to zinc ion; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), T-complex protein 1, zeta subunit (InterPro:IPR012722), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT5G16070.1); Has 18475 Blast hits to 17833 proteins in 3650 species: Archae - 805; Bacteria - 8777; Metazoa - 2106; Fungi - 1471; Plants - 861; Viruses - 0; Other Eukaryotes - 4455 (source: NCBI BLink). & (gnl|cdd|73353 : 802.0) no description available & (gnl|cdd|35580 : 750.0) no description available & (p54411|tcpe2_avesa : 188.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1858.0) & (original description: Putative CCT6A, Description = T-complex protein 1 subunit zeta 1, PFAM = PF00118)' T '29.6' 'protein.folding' 'niben101scf00986_85790-91895' '(at5g13410 : 307.0) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT4G19830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35772 : 121.0) no description available & (reliability: 614.0) & (original description: Putative FBP19, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00254)' T '29.6' 'protein.folding' 'niben101scf01005_114808-125688' '(o04287|fkb12_vicfa : 180.0) Peptidyl-prolyl isomerase FKBP12 (EC 5.2.1.8) (12 kDa FK506-binding protein) (12 kDa FKBP) (FKBP-12) (Immunophilin FKBP12) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Vicia faba (Broad bean) & (at5g64350 : 176.0) FK506-binding protein 12 (FKBP12); FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: chloroplast thylakoid lumen; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G55520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35764 : 139.0) no description available & (gnl|cdd|30891 : 102.0) no description available & (reliability: 352.0) & (original description: Putative FKBP12, Description = Peptidyl-prolyl cis-trans isomerase FKBP12, PFAM = PF00254)' T '29.6' 'protein.folding' 'niben101scf01091_33295-38678' '(o49939|tlp40_spiol : 643.0) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (40 kDa thylakoid lumen PPIase) (40 kDa thylakoid lumen rotamase) - Spinacia oleracea (Spinach) & (at3g01480 : 630.0) Encodes a chloroplast cyclophilin functioning in the assembly and maintenance of photosystem II (PSII) supercomplexes.; cyclophilin 38 (CYP38); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, photosystem II assembly, photosystem II stabilization, defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G15520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29395 : 269.0) no description available & (reliability: 1260.0) & (original description: Putative CYP38, Description = Peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic, PFAM = PF00160)' T '29.6' 'protein.folding' 'niben101scf01124_2310882-2314617' '(at4g24810 : 102.0) similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147); Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G50330.1). & (reliability: 200.0) & (original description: Putative TIG, Description = Trigger factor type chaperone family protein, PFAM = PF03109;PF05698)' T '29.6' 'protein.folding' 'niben101scf01181_339540-342336' '(at1g18170 : 239.0) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT1G73655.1); Has 2743 Blast hits to 2728 proteins in 885 species: Archae - 0; Bacteria - 1518; Metazoa - 283; Fungi - 83; Plants - 455; Viruses - 0; Other Eukaryotes - 404 (source: NCBI BLink). & (gnl|cdd|35772 : 135.0) no description available & (reliability: 478.0) & (original description: Putative FKBP17-3, Description = Peptidyl-prolyl cis-trans isomerase FKBP17-3, chloroplastic, PFAM = PF00254)' T '29.6' 'protein.folding' 'niben101scf01374_613956-619853' '(at1g55490 : 843.0) encodes the beta subunit of the chloroplast chaperonin 60, a homologue of bacterial GroEL. Mutants in this gene develops lesions on its leaves, expresses systemic acquired resistance (SAR) and develops accelerated cell death to heat shock stress. The protein has molecular chaperone activity for suppressing protein aggregation in vitro.; chaperonin 60 beta (CPN60B); FUNCTIONS IN: protein binding; INVOLVED IN: protein folding, systemic acquired resistance, cell death, response to cold, chaperone mediated protein folding requiring cofactor; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G13470.1); Has 34209 Blast hits to 34175 proteins in 8723 species: Archae - 804; Bacteria - 21846; Metazoa - 1741; Fungi - 1612; Plants - 841; Viruses - 2; Other Eukaryotes - 7363 (source: NCBI BLink). & (p08927|rubb_pea : 828.0) RuBisCO large subunit-binding protein subunit beta, chloroplast precursor (60 kDa chaperonin subunit beta) (CPN-60 beta) - Pisum sativum (Garden pea) & (gnl|cdd|48161 : 702.0) no description available & (gnl|cdd|35577 : 606.0) no description available & (reliability: 1676.0) & (original description: Putative cpnL, Description = 60 kDa chaperonin, PFAM = PF00118)' T '29.6' 'protein.folding' 'niben101scf01382_243784-247945' '(p26413|hsp70_soybn : 981.0) Heat shock 70 kDa protein - Glycine max (Soybean) & (at1g16030 : 969.0) heat shock protein 70B (Hsp70b); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: cytosol, cell wall, plasma membrane, chloroplast, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (TAIR:AT3G12580.1); Has 33913 Blast hits to 33562 proteins in 4835 species: Archae - 164; Bacteria - 16454; Metazoa - 3784; Fungi - 1785; Plants - 1262; Viruses - 309; Other Eukaryotes - 10155 (source: NCBI BLink). & (gnl|cdd|84440 : 892.0) no description available & (gnl|cdd|35323 : 890.0) no description available & (reliability: 1886.0) & (original description: Putative SSA3, Description = Heat shock protein SSA3, PFAM = PF00012)' T '29.6' 'protein.folding' 'niben101scf01523_40805-50622' '(at5g42000 : 266.0) ORMDL family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding; LOCATED IN: integral to membrane, endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ORMDL (InterPro:IPR007203); BEST Arabidopsis thaliana protein match is: ORMDL family protein (TAIR:AT1G01230.1); Has 531 Blast hits to 531 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 274; Fungi - 143; Plants - 90; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|38529 : 200.0) no description available & (gnl|cdd|67668 : 185.0) no description available & (reliability: 532.0) & (original description: Putative At5g42000, Description = At5g42000, PFAM = PF04061)' T '29.6' 'protein.folding' 'niben101scf01594_544025-547352' '(at1g14980 : 153.0) Encodes mitochondrial-localized chaperonin 10 that complements the E.coli groES mutant. Its mRNA is upregulated in response to heat shock treatment and is expressed uniformly in various organs.; chaperonin 10 (CPN10); FUNCTIONS IN: copper ion binding, chaperone binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn10 (InterPro:IPR020818), GroES-like (InterPro:IPR011032), Chaperonin Cpn10, conserved site (InterPro:IPR018369), Chaperonin Cpn10, subgroup (InterPro:IPR001476); BEST Arabidopsis thaliana protein match is: GroES-like family protein (TAIR:AT1G23100.1); Has 9195 Blast hits to 9085 proteins in 2839 species: Archae - 7; Bacteria - 6160; Metazoa - 328; Fungi - 119; Plants - 343; Viruses - 2; Other Eukaryotes - 2236 (source: NCBI BLink). & (q96539|ch10_brana : 152.0) 10 kDa chaperonin (Protein CPN10) (Protein groES) - Brassica napus (Rape) & (gnl|cdd|36854 : 124.0) no description available & (gnl|cdd|73192 : 102.0) no description available & (reliability: 306.0) & (original description: Putative CPN10, Description = 10 kDa chaperonin, PFAM = PF00166)' T '29.6' 'protein.folding' 'niben101scf01703_250230-257036' '(at5g17710 : 191.0) embryo defective 1241 (EMB1241); FUNCTIONS IN: copper ion binding; INVOLVED IN: protein folding, embryo development ending in seed dormancy; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GrpE nucleotide exchange factor (InterPro:IPR000740), GrpE nucleotide exchange factor, coiled-coil (InterPro:IPR013805), GrpE nucleotide exchange factor, head (InterPro:IPR009012); BEST Arabidopsis thaliana protein match is: Co-chaperone GrpE family protein (TAIR:AT1G36390.2); Has 8394 Blast hits to 8358 proteins in 2682 species: Archae - 138; Bacteria - 5138; Metazoa - 231; Fungi - 167; Plants - 159; Viruses - 7; Other Eukaryotes - 2554 (source: NCBI BLink). & (gnl|cdd|30921 : 143.0) no description available & (gnl|cdd|38213 : 89.3) no description available & (reliability: 382.0) & (original description: Putative grpE, Description = Protein GrpE, PFAM = PF01025)' T '29.6' 'protein.folding' 'niben101scf01791_303041-313491' '(at5g26360 : 957.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), T-complex protein 1, gamma subunit (InterPro:IPR012719), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G11830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|73351 : 786.0) no description available & (gnl|cdd|35585 : 752.0) no description available & (p54411|tcpe2_avesa : 271.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1914.0) & (original description: Putative CCT3, Description = T-complex protein 1 subunit gamma, PFAM = PF00118)' T '29.6' 'protein.folding' 'niben101scf01818_686816-695739' '(at5g13410 : 299.0) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT4G19830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35772 : 115.0) no description available & (reliability: 598.0) & (original description: Putative PGSC0003DMG401028027, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00254)' T '29.6' 'protein.folding' 'niben101scf01833_128706-138289' '(at5g49510 : 266.0) prefoldin 3 (PFD3); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin alpha-like (InterPro:IPR004127), Prefoldin (InterPro:IPR009053), Prefoldin, subunit 3 (InterPro:IPR016655); Has 406 Blast hits to 406 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 158; Fungi - 133; Plants - 37; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (gnl|cdd|38523 : 207.0) no description available & (gnl|cdd|86212 : 82.6) no description available & (reliability: 532.0) & (original description: Putative vbp1, Description = Prefoldin subunit 3, PFAM = PF02996)' T '29.6' 'protein.folding' 'niben101scf02078_633752-642649' '(at3g13860 : 781.0) heat shock protein 60-3A (HSP60-3A); FUNCTIONS IN: ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: heat shock protein 60 (TAIR:AT3G23990.1); Has 33806 Blast hits to 33780 proteins in 8724 species: Archae - 691; Bacteria - 21872; Metazoa - 1598; Fungi - 1587; Plants - 751; Viruses - 2; Other Eukaryotes - 7305 (source: NCBI BLink). & (gnl|cdd|48161 : 714.0) no description available & (q05046|ch62_cucma : 706.0) Chaperonin CPN60-2, mitochondrial precursor (HSP60-2) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|35577 : 604.0) no description available & (reliability: 1562.0) & (original description: Putative dmdA, Description = Protein Cpn60, PFAM = PF00118)' T '29.6' 'protein.folding' 'niben101scf02124_147651-152021' '(p26413|hsp70_soybn : 1063.0) Heat shock 70 kDa protein - Glycine max (Soybean) & (at1g16030 : 1050.0) heat shock protein 70B (Hsp70b); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: cytosol, cell wall, plasma membrane, chloroplast, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (TAIR:AT3G12580.1); Has 33913 Blast hits to 33562 proteins in 4835 species: Archae - 164; Bacteria - 16454; Metazoa - 3784; Fungi - 1785; Plants - 1262; Viruses - 309; Other Eukaryotes - 10155 (source: NCBI BLink). & (gnl|cdd|35323 : 908.0) no description available & (gnl|cdd|84440 : 893.0) no description available & (reliability: 2026.0) & (original description: Putative HSP70, Description = Heat shock 70 kDa protein, PFAM = PF00012)' T '29.6' 'protein.folding' 'niben101scf02230_203812-214448' '(at5g17710 : 239.0) embryo defective 1241 (EMB1241); FUNCTIONS IN: copper ion binding; INVOLVED IN: protein folding, embryo development ending in seed dormancy; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GrpE nucleotide exchange factor (InterPro:IPR000740), GrpE nucleotide exchange factor, coiled-coil (InterPro:IPR013805), GrpE nucleotide exchange factor, head (InterPro:IPR009012); BEST Arabidopsis thaliana protein match is: Co-chaperone GrpE family protein (TAIR:AT1G36390.2); Has 8394 Blast hits to 8358 proteins in 2682 species: Archae - 138; Bacteria - 5138; Metazoa - 231; Fungi - 167; Plants - 159; Viruses - 7; Other Eukaryotes - 2554 (source: NCBI BLink). & (gnl|cdd|30921 : 140.0) no description available & (gnl|cdd|38213 : 116.0) no description available & (reliability: 478.0) & (original description: Putative grpE, Description = GrpE protein homolog, PFAM = PF01025)' T '29.6' 'protein.folding' 'niben101scf02437_694906-701179' '(at5g20720 : 307.0) Encodes a chloroplast co-chaperonin with similarity to CPN21 from spinach, E.coli GroES.; chaperonin 20 (CPN20); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn10 (InterPro:IPR020818), GroES-like (InterPro:IPR011032), Chaperonin Cpn10, conserved site (InterPro:IPR018369), Chaperonin 21, chloroplast (InterPro:IPR017416), Chaperonin Cpn10, subgroup (InterPro:IPR001476); BEST Arabidopsis thaliana protein match is: chaperonin 10 (TAIR:AT1G14980.1). & (q02073|ch10c_spiol : 287.0) 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10) - Spinacia oleracea (Spinach) & (gnl|cdd|80634 : 110.0) no description available & (gnl|cdd|36854 : 98.0) no description available & (reliability: 614.0) & (original description: Putative cp10, Description = 10 kDa chaperonin, PFAM = PF00166;PF00166)' T '29.6' 'protein.folding' 'niben101scf02462_317973-336856' '(at1g29990 : 155.0) Encodes a cytoplastic protein with similarity to yeast prefoldin6, a subunit of the prefoldin complex. The PFD complex is thought to function along with the TCP ring complex to properly fold microtubule proteins.; prefoldin 6 (PFD6); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding, cortical microtubule organization; LOCATED IN: prefoldin complex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin beta-like (InterPro:IPR002777), Prefoldin (InterPro:IPR009053); Has 469 Blast hits to 469 proteins in 236 species: Archae - 55; Bacteria - 6; Metazoa - 162; Fungi - 121; Plants - 38; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|38688 : 106.0) no description available & (reliability: 310.0) & (original description: Putative pfdn6, Description = MGC154905 protein, PFAM = PF01920)' T '29.6' 'protein.folding' 'niben101scf02730_104461-109401' '(at3g01480 : 645.0) Encodes a chloroplast cyclophilin functioning in the assembly and maintenance of photosystem II (PSII) supercomplexes.; cyclophilin 38 (CYP38); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, photosystem II assembly, photosystem II stabilization, defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G15520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o49939|tlp40_spiol : 636.0) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (40 kDa thylakoid lumen PPIase) (40 kDa thylakoid lumen rotamase) - Spinacia oleracea (Spinach) & (gnl|cdd|29395 : 268.0) no description available & (reliability: 1290.0) & (original description: Putative CYP38, Description = Peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic, PFAM = PF00160)' T '29.6' 'protein.folding' 'niben101scf02744_25138-29392' '(at5g20720 : 327.0) Encodes a chloroplast co-chaperonin with similarity to CPN21 from spinach, E.coli GroES.; chaperonin 20 (CPN20); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn10 (InterPro:IPR020818), GroES-like (InterPro:IPR011032), Chaperonin Cpn10, conserved site (InterPro:IPR018369), Chaperonin 21, chloroplast (InterPro:IPR017416), Chaperonin Cpn10, subgroup (InterPro:IPR001476); BEST Arabidopsis thaliana protein match is: chaperonin 10 (TAIR:AT1G14980.1). & (q02073|ch10c_spiol : 291.0) 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10) - Spinacia oleracea (Spinach) & (gnl|cdd|80634 : 116.0) no description available & (gnl|cdd|36854 : 107.0) no description available & (reliability: 654.0) & (original description: Putative cp10, Description = 10 kDa chaperonin, PFAM = PF00166;PF00166)' T '29.6' 'protein.folding' 'niben101scf02756_29668-35756' '(at3g25230 : 737.0) Encodes a a high molecular weight member of the FK506 binding protein (FKBP) family. It has three FKBP12-like domains, tetratricopeptide repeats, and a putative calmodulin binding domain. Modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs.; rotamase FKBP 1 (ROF1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-type peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT5G48570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43207|fkb70_wheat : 689.0) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) & (gnl|cdd|35763 : 295.0) no description available & (gnl|cdd|84647 : 139.0) no description available & (reliability: 1474.0) & (original description: Putative FKBP62, Description = Peptidyl-prolyl cis-trans isomerase FKBP62, PFAM = PF00254;PF00254;PF00254;PF00515)' T '29.6' 'protein.folding' 'niben101scf02771_132776-137895' '(p09189|hsp7c_pethy : 1097.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at3g12580 : 1092.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (gnl|cdd|35323 : 898.0) no description available & (gnl|cdd|84440 : 896.0) no description available & (reliability: 2180.0) & (original description: Putative hspB, Description = Heat shock protein 70, PFAM = PF00012)' T '29.6' 'protein.folding' 'niben101scf02772_544361-564052' '(at3g02530 : 927.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: response to cadmium ion, response to zinc ion; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), T-complex protein 1, zeta subunit (InterPro:IPR012722), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT5G16070.1); Has 18475 Blast hits to 17833 proteins in 3650 species: Archae - 805; Bacteria - 8777; Metazoa - 2106; Fungi - 1471; Plants - 861; Viruses - 0; Other Eukaryotes - 4455 (source: NCBI BLink). & (gnl|cdd|73353 : 808.0) no description available & (gnl|cdd|35580 : 753.0) no description available & (p54411|tcpe2_avesa : 190.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1854.0) & (original description: Putative CCT6A, Description = T-complex protein 1 subunit zeta 1, PFAM = PF00118)' T '29.6' 'protein.folding' 'niben101scf02836_341278-346510' '(at2g07340 : 144.0) PREFOLDIN 1 (PFD1); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin beta-like (InterPro:IPR002777), Prefoldin (InterPro:IPR009053); Has 281 Blast hits to 281 proteins in 130 species: Archae - 13; Bacteria - 2; Metazoa - 136; Fungi - 51; Plants - 52; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative PFD1, Description = At2g07350/T13E11.12, PFAM = PF01920)' T '29.6' 'protein.folding' 'niben101scf02842_79482-86493' '(at3g23990 : 860.0) mitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria.; heat shock protein 60 (HSP60); FUNCTIONS IN: copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, response to cyclopentenone, chaperone-mediated protein complex assembly, response to heat, mitochondrion organization; LOCATED IN: cytosol, cytosolic ribosome, mitochondrion, plasma membrane, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: heat shock protein 60-2 (TAIR:AT2G33210.1); Has 33706 Blast hits to 33652 proteins in 8680 species: Archae - 676; Bacteria - 21745; Metazoa - 1618; Fungi - 1515; Plants - 790; Viruses - 2; Other Eukaryotes - 7360 (source: NCBI BLink). & (q05046|ch62_cucma : 859.0) Chaperonin CPN60-2, mitochondrial precursor (HSP60-2) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|48161 : 758.0) no description available & (gnl|cdd|35577 : 661.0) no description available & (reliability: 1720.0) & (original description: Putative acnA, Description = Protein Cpn60, PFAM = PF00118)' T '29.6' 'protein.folding' 'niben101scf02912_78428-84432' '(at3g25230 : 741.0) Encodes a a high molecular weight member of the FK506 binding protein (FKBP) family. It has three FKBP12-like domains, tetratricopeptide repeats, and a putative calmodulin binding domain. Modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs.; rotamase FKBP 1 (ROF1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-type peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT5G48570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43207|fkb70_wheat : 717.0) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) & (gnl|cdd|35763 : 304.0) no description available & (gnl|cdd|84647 : 137.0) no description available & (reliability: 1482.0) & (original description: Putative PGSC0003DMG400007177, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00515;PF00254;PF00254;PF00254)' T '29.6' 'protein.folding' 'niben101scf02945_244599-248277' '(at3g06778 : 135.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G19570.1); Has 18848 Blast hits to 18845 proteins in 3064 species: Archae - 137; Bacteria - 8171; Metazoa - 3106; Fungi - 1452; Plants - 1923; Viruses - 12; Other Eukaryotes - 4047 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative , Description = , PFAM = PF00226)' T '29.6' 'protein.folding' 'niben101scf03070_345709-366521' '(at5g49510 : 268.0) prefoldin 3 (PFD3); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin alpha-like (InterPro:IPR004127), Prefoldin (InterPro:IPR009053), Prefoldin, subunit 3 (InterPro:IPR016655); Has 406 Blast hits to 406 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 158; Fungi - 133; Plants - 37; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (gnl|cdd|38523 : 210.0) no description available & (gnl|cdd|86212 : 86.4) no description available & (reliability: 536.0) & (original description: Putative VBP1, Description = Prefoldin subunit 3, PFAM = PF02996)' T '29.6' 'protein.folding' 'niben101scf03070_363598-366524' '(at5g49510 : 156.0) prefoldin 3 (PFD3); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin alpha-like (InterPro:IPR004127), Prefoldin (InterPro:IPR009053), Prefoldin, subunit 3 (InterPro:IPR016655); Has 406 Blast hits to 406 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 158; Fungi - 133; Plants - 37; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (gnl|cdd|38523 : 123.0) no description available & (reliability: 312.0) & (original description: Putative vbp1, Description = Prefoldin subunit 3, PFAM = PF02996)' T '29.6' 'protein.folding' 'niben101scf03076_190333-197524' '(at5g18820 : 715.0) embryo defective 3007 (EMB3007); FUNCTIONS IN: ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: chaperonin-60alpha (TAIR:AT2G28000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|48161 : 662.0) no description available & (p08926|ruba_pea : 651.0) RuBisCO large subunit-binding protein subunit alpha, chloroplast precursor (60 kDa chaperonin subunit alpha) (CPN-60 alpha) - Pisum sativum (Garden pea) & (gnl|cdd|35577 : 542.0) no description available & (reliability: 1430.0) & (original description: Putative groL, Description = GroEL protein, PFAM = PF00118)' T '29.6' 'protein.folding' 'niben101scf03197_684859-691863' '(q05046|ch62_cucma : 915.0) Chaperonin CPN60-2, mitochondrial precursor (HSP60-2) - Cucurbita maxima (Pumpkin) (Winter squash) & (at3g23990 : 902.0) mitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria.; heat shock protein 60 (HSP60); FUNCTIONS IN: copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, response to cyclopentenone, chaperone-mediated protein complex assembly, response to heat, mitochondrion organization; LOCATED IN: cytosol, cytosolic ribosome, mitochondrion, plasma membrane, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: heat shock protein 60-2 (TAIR:AT2G33210.1); Has 33706 Blast hits to 33652 proteins in 8680 species: Archae - 676; Bacteria - 21745; Metazoa - 1618; Fungi - 1515; Plants - 790; Viruses - 2; Other Eukaryotes - 7360 (source: NCBI BLink). & (gnl|cdd|48161 : 772.0) no description available & (gnl|cdd|35577 : 687.0) no description available & (reliability: 1804.0) & (original description: Putative hspA, Description = Chaperonin 60, PFAM = PF00118)' T '29.6' 'protein.folding' 'niben101scf03264_307675-315265' '(at3g21640 : 530.0) encodes a 42 kDa FK506-binding protein (AtFKBP42) that possesses similarity to multidomain peptidyl-prolyl cis/trans isomerases (PPIases, EC 5.2.1.8), which are known to be components of mammalian steroid hormone receptor complexes. The protein appears to be localized to the plasma membrane by electron microscopy and binds to HSP90.1 and calmodulin in vitro. It also aggregates citrate synthase in vitro but does NOT show PPIase activity in vivo. Mutants are reduced in size and exhibit disoriented growth in all organs.; TWISTED DWARF 1 (TWD1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: rotamase FKBP 1 (TAIR:AT3G25230.2); Has 6043 Blast hits to 5631 proteins in 871 species: Archae - 12; Bacteria - 1331; Metazoa - 2461; Fungi - 414; Plants - 774; Viruses - 0; Other Eukaryotes - 1051 (source: NCBI BLink). & (gnl|cdd|35763 : 259.0) no description available & (q43207|fkb70_wheat : 117.0) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) & (reliability: 1060.0) & (original description: Putative FKBP42, Description = Peptidyl-prolyl cis-trans isomerase FKBP42, PFAM = PF00254)' T '29.6' 'protein.folding' 'niben101scf03384_17334-19618' '(at5g43260 : 110.0) chaperone protein dnaJ-related; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative At5g43260, Description = Chaperone protein dnaJ-like protein, PFAM = )' T '29.6' 'protein.folding' 'niben101scf03481_75327-83480' '(at3g10060 : 285.0) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT1G20810.1); Has 8406 Blast hits to 7908 proteins in 1571 species: Archae - 44; Bacteria - 4267; Metazoa - 1616; Fungi - 433; Plants - 872; Viruses - 0; Other Eukaryotes - 1174 (source: NCBI BLink). & (gnl|cdd|35772 : 148.0) no description available & (gnl|cdd|30891 : 105.0) no description available & (reliability: 570.0) & (original description: Putative fkpB, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00254)' T '29.6' 'protein.folding' 'niben101scf03550_76688-81988' '(at3g18190 : 824.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin TCP-1, conserved site (InterPro:IPR002194), T-complex protein 1, delta subunit (InterPro:IPR012717); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT1G24510.1); Has 19273 Blast hits to 19203 proteins in 3973 species: Archae - 808; Bacteria - 9512; Metazoa - 2051; Fungi - 1477; Plants - 841; Viruses - 2; Other Eukaryotes - 4582 (source: NCBI BLink). & (gnl|cdd|48155 : 817.0) no description available & (gnl|cdd|35579 : 782.0) no description available & (p54411|tcpe2_avesa : 269.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1648.0) & (original description: Putative CCT4, Description = T-complex protein 1 subunit delta, PFAM = PF00118)' T '29.6' 'protein.folding' 'niben101scf03651_520607-535074' '(at5g12430 : 548.0) Heat shock protein DnaJ with tetratricopeptide repeat; FUNCTIONS IN: heat shock protein binding, binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Heat shock protein DnaJ with tetratricopeptide repeat (TAIR:AT2G41520.1); Has 27844 Blast hits to 24585 proteins in 3132 species: Archae - 222; Bacteria - 9738; Metazoa - 5941; Fungi - 3019; Plants - 3250; Viruses - 11; Other Eukaryotes - 5663 (source: NCBI BLink). & (gnl|cdd|35770 : 143.0) no description available & (reliability: 1096.0) & (original description: Putative BnaA10g30100D, Description = BnaA10g30100D protein, PFAM = PF00226)' T '29.6' 'protein.folding' 'niben101scf03718_404062-421262' '(at5g49510 : 273.0) prefoldin 3 (PFD3); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin alpha-like (InterPro:IPR004127), Prefoldin (InterPro:IPR009053), Prefoldin, subunit 3 (InterPro:IPR016655); Has 406 Blast hits to 406 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 158; Fungi - 133; Plants - 37; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (gnl|cdd|38523 : 208.0) no description available & (gnl|cdd|86212 : 87.6) no description available & (reliability: 546.0) & (original description: Putative vbp1, Description = Prefoldin subunit 3, PFAM = PF02996)' T '29.6' 'protein.folding' 'niben101scf04170_268079-279190' '(at5g42000 : 250.0) ORMDL family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding; LOCATED IN: integral to membrane, endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ORMDL (InterPro:IPR007203); BEST Arabidopsis thaliana protein match is: ORMDL family protein (TAIR:AT1G01230.1); Has 531 Blast hits to 531 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 274; Fungi - 143; Plants - 90; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|38529 : 200.0) no description available & (gnl|cdd|67668 : 185.0) no description available & (reliability: 500.0) & (original description: Putative At5g42000, Description = At5g42000, PFAM = PF04061)' T '29.6' 'protein.folding' 'niben101scf04375_812087-842007' '(at5g26360 : 936.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), T-complex protein 1, gamma subunit (InterPro:IPR012719), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G11830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|73351 : 774.0) no description available & (gnl|cdd|35585 : 738.0) no description available & (p54411|tcpe2_avesa : 265.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1872.0) & (original description: Putative CCT3, Description = T-complex protein 1 subunit gamma, PFAM = PF00118)' T '29.6' 'protein.folding' 'niben101scf04375_1146942-1150249' '(at1g14980 : 150.0) Encodes mitochondrial-localized chaperonin 10 that complements the E.coli groES mutant. Its mRNA is upregulated in response to heat shock treatment and is expressed uniformly in various organs.; chaperonin 10 (CPN10); FUNCTIONS IN: copper ion binding, chaperone binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn10 (InterPro:IPR020818), GroES-like (InterPro:IPR011032), Chaperonin Cpn10, conserved site (InterPro:IPR018369), Chaperonin Cpn10, subgroup (InterPro:IPR001476); BEST Arabidopsis thaliana protein match is: GroES-like family protein (TAIR:AT1G23100.1); Has 9195 Blast hits to 9085 proteins in 2839 species: Archae - 7; Bacteria - 6160; Metazoa - 328; Fungi - 119; Plants - 343; Viruses - 2; Other Eukaryotes - 2236 (source: NCBI BLink). & (q96539|ch10_brana : 149.0) 10 kDa chaperonin (Protein CPN10) (Protein groES) - Brassica napus (Rape) & (gnl|cdd|36854 : 118.0) no description available & (gnl|cdd|73192 : 98.7) no description available & (reliability: 300.0) & (original description: Putative hspe1, Description = Heat shock 10 protein 1 (Chaperonin 10), PFAM = PF00166)' T '29.6' 'protein.folding' 'niben101scf04382_412009-417122' '(at3g55520 : 225.0) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: chloroplast thylakoid lumen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-type peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT5G48570.1); Has 8353 Blast hits to 7666 proteins in 1517 species: Archae - 10; Bacteria - 3980; Metazoa - 1950; Fungi - 483; Plants - 752; Viruses - 0; Other Eukaryotes - 1178 (source: NCBI BLink). & (gnl|cdd|35763 : 118.0) no description available & (gnl|cdd|84647 : 101.0) no description available & (q43207|fkb70_wheat : 92.4) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) & (reliability: 450.0) & (original description: Putative fkbp4, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00254)' T '29.6' 'protein.folding' 'niben101scf04490_1769-5247' '(p09189|hsp7c_pethy : 830.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at3g12580 : 795.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (gnl|cdd|35324 : 665.0) no description available & (gnl|cdd|84440 : 650.0) no description available & (reliability: 1570.0) & (original description: Putative hspB, Description = Heat shock protein 70, PFAM = PF00012)' T '29.6' 'protein.folding' 'niben101scf04560_327762-339670' '(gnl|cdd|48153 : 888.0) no description available & (at5g20890 : 873.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: anchored to plasma membrane, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), T-complex protein 1, beta subunit (InterPro:IPR012716), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G11830.1); Has 19831 Blast hits to 19435 proteins in 3922 species: Archae - 807; Bacteria - 9602; Metazoa - 2181; Fungi - 1427; Plants - 861; Viruses - 0; Other Eukaryotes - 4953 (source: NCBI BLink). & (gnl|cdd|35584 : 839.0) no description available & (p54411|tcpe2_avesa : 275.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1746.0) & (original description: Putative CCT2, Description = T-complex protein 1 subunit beta, PFAM = PF00118)' T '29.6' 'protein.folding' 'niben101scf04632_1051451-1056089' '(at5g17840 : 132.0) DnaJ/Hsp40 cysteine-rich domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative Ccrd_018343, Description = Heat shock protein DnaJ, cysteine-rich domain-containing protein, PFAM = )' T '29.6' 'protein.folding' 'niben101scf04745_755050-764638' '(at3g15120 : 1219.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: cell division cycle protein 48-related / CDC48-related (TAIR:AT1G05910.1); Has 80986 Blast hits to 58843 proteins in 3591 species: Archae - 1718; Bacteria - 20912; Metazoa - 22400; Fungi - 8848; Plants - 5536; Viruses - 480; Other Eukaryotes - 21092 (source: NCBI BLink). & (gnl|cdd|35951 : 480.0) no description available & (gnl|cdd|30812 : 222.0) no description available & (p54774|cdc48_soybn : 199.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 2438.0) & (original description: Putative ATAD2B, Description = ATPase family AAA domain-containing protein 2B isoform 1, PFAM = PF00004;PF13771)' T '29.6' 'protein.folding' 'niben101scf04847_362167-379296' '(at4g26555 : 206.0) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT4G19830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative T15N24, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00254)' T '29.6' 'protein.folding' 'niben101scf04886_548247-553178' '(p09189|hsp7c_pethy : 1096.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at3g12580 : 1092.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (gnl|cdd|35323 : 898.0) no description available & (gnl|cdd|84440 : 896.0) no description available & (reliability: 2176.0) & (original description: Putative hsp70, Description = 70kDa heat shock protein, PFAM = PF00012)' T '29.6' 'protein.folding' 'niben101scf05389_7981-13552' '(p09189|hsp7c_pethy : 1069.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at5g02500 : 1065.0) encodes a member of heat shock protein 70 family.; heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cold, response to virus, response to heat; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35323 : 896.0) no description available & (gnl|cdd|84440 : 885.0) no description available & (reliability: 2130.0) & (original description: Putative hspB, Description = Heat shock protein 70, PFAM = PF00012)' T '29.6' 'protein.folding' 'niben101scf05389_9797-100257' '(p09189|hsp7c_pethy : 226.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at5g02500 : 224.0) encodes a member of heat shock protein 70 family.; heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cold, response to virus, response to heat; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35324 : 181.0) no description available & (gnl|cdd|84440 : 163.0) no description available & (reliability: 448.0) & (original description: Putative hsc1, Description = Heat shock protein 70, PFAM = PF00012)' T '29.6' 'protein.folding' 'niben101scf05411_285586-290489' '(at1g75690 : 163.0) DnaJ/Hsp40 cysteine-rich domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 581 Blast hits to 563 proteins in 197 species: Archae - 4; Bacteria - 299; Metazoa - 12; Fungi - 21; Plants - 163; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative SPA, Description = Protein SPA, chloroplastic, PFAM = )' T '29.6' 'protein.folding' 'niben101scf05506_670687-675510' '(at3g12580 : 464.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (p29357|hsp7e_spiol : 459.0) Chloroplast envelope membrane 70 kDa heat shock-related protein - Spinacia oleracea (Spinach) & (gnl|cdd|35323 : 412.0) no description available & (gnl|cdd|84440 : 378.0) no description available & (reliability: 918.0) & (original description: Putative hspB, Description = Heat shock protein 70, PFAM = PF00012)' T '29.6' 'protein.folding' 'niben101scf05692_854468-861415' '(at4g26780 : 225.0) unknown function; AR192; FUNCTIONS IN: copper ion binding; INVOLVED IN: protein folding, protein import into mitochondrial matrix; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GrpE nucleotide exchange factor (InterPro:IPR000740), GrpE nucleotide exchange factor, head (InterPro:IPR009012), GrpE nucleotide exchange factor, coiled-coil (InterPro:IPR013805); BEST Arabidopsis thaliana protein match is: Co-chaperone GrpE family protein (TAIR:AT5G55200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38213 : 186.0) no description available & (gnl|cdd|85192 : 155.0) no description available & (reliability: 450.0) & (original description: Putative GrpE1, Description = GrpE protein homolog, PFAM = PF01025)' T '29.6' 'protein.folding' 'niben101scf05692_862707-873801' '(at5g55220 : 622.0) trigger factor type chaperone family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, C-terminal, bacterial (InterPro:IPR008880), Trigger factor (InterPro:IPR005215), Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80879 : 186.0) no description available & (reliability: 1244.0) & (original description: Putative TIG, Description = Trigger factor-like protein TIG, Chloroplastic, PFAM = PF05697;PF05698)' T '29.6' 'protein.folding' 'niben101scf05850_52220-69235' '(at5g12430 : 635.0) Heat shock protein DnaJ with tetratricopeptide repeat; FUNCTIONS IN: heat shock protein binding, binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Heat shock protein DnaJ with tetratricopeptide repeat (TAIR:AT2G41520.1); Has 27844 Blast hits to 24585 proteins in 3132 species: Archae - 222; Bacteria - 9738; Metazoa - 5941; Fungi - 3019; Plants - 3250; Viruses - 11; Other Eukaryotes - 5663 (source: NCBI BLink). & (gnl|cdd|35770 : 127.0) no description available & (reliability: 1270.0) & (original description: Putative BnaA10g30100D, Description = BnaA10g30100D protein, PFAM = PF13181;PF13181;PF00226)' T '29.6' 'protein.folding' 'niben101scf06180_104583-127753' '(gnl|cdd|48157 : 936.0) no description available & (gnl|cdd|35582 : 879.0) no description available & (at3g11830 : 877.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), T-complex protein 1, eta subunit (InterPro:IPR012720), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: T-complex protein 1 alpha subunit (TAIR:AT3G20050.1). & (p54411|tcpe2_avesa : 232.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1754.0) & (original description: Putative CCT7, Description = T-complex protein 1 subunit eta, PFAM = PF00118)' T '29.6' 'protein.folding' 'niben101scf06423_108994-115715' '(at2g43560 : 256.0) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FK506-binding protein 13 (TAIR:AT5G45680.1); Has 8823 Blast hits to 8572 proteins in 1646 species: Archae - 42; Bacteria - 4685; Metazoa - 1489; Fungi - 464; Plants - 749; Viruses - 0; Other Eukaryotes - 1394 (source: NCBI BLink). & (gnl|cdd|35772 : 133.0) no description available & (gnl|cdd|30891 : 105.0) no description available & (reliability: 512.0) & (original description: Putative fbp, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00254)' T '29.6' 'protein.folding' 'niben101scf07001_218657-223238' '(o04287|fkb12_vicfa : 181.0) Peptidyl-prolyl isomerase FKBP12 (EC 5.2.1.8) (12 kDa FK506-binding protein) (12 kDa FKBP) (FKBP-12) (Immunophilin FKBP12) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Vicia faba (Broad bean) & (at5g64350 : 177.0) FK506-binding protein 12 (FKBP12); FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: chloroplast thylakoid lumen; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G55520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35764 : 137.0) no description available & (gnl|cdd|30891 : 100.0) no description available & (reliability: 354.0) & (original description: Putative FKBP12, Description = Peptidyl-prolyl cis-trans isomerase FKBP12, PFAM = PF00254)' T '29.6' 'protein.folding' 'niben101scf07236_62929-69826' '(at2g43560 : 263.0) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FK506-binding protein 13 (TAIR:AT5G45680.1); Has 8823 Blast hits to 8572 proteins in 1646 species: Archae - 42; Bacteria - 4685; Metazoa - 1489; Fungi - 464; Plants - 749; Viruses - 0; Other Eukaryotes - 1394 (source: NCBI BLink). & (gnl|cdd|35772 : 131.0) no description available & (gnl|cdd|30891 : 102.0) no description available & (reliability: 526.0) & (original description: Putative fbp, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00254)' T '29.6' 'protein.folding' 'niben101scf07428_158856-164904' '(at3g25230 : 722.0) Encodes a a high molecular weight member of the FK506 binding protein (FKBP) family. It has three FKBP12-like domains, tetratricopeptide repeats, and a putative calmodulin binding domain. Modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs.; rotamase FKBP 1 (ROF1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-type peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT5G48570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43207|fkb70_wheat : 690.0) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) & (gnl|cdd|35763 : 304.0) no description available & (gnl|cdd|84647 : 131.0) no description available & (reliability: 1444.0) & (original description: Putative FKBP62, Description = Peptidyl-prolyl cis-trans isomerase FKBP62, PFAM = PF00515;PF00254;PF00254;PF00254)' T '29.6' 'protein.folding' 'niben101scf07639_487286-493092' '(at3g60210 : 156.0) GroES-like family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn10 (InterPro:IPR020818), GroES-like (InterPro:IPR011032), Chaperonin Cpn10, subgroup (InterPro:IPR001476); BEST Arabidopsis thaliana protein match is: chloroplast chaperonin 10 (TAIR:AT2G44650.1); Has 3302 Blast hits to 3296 proteins in 900 species: Archae - 7; Bacteria - 1960; Metazoa - 11; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 1153 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative cpn10, Description = CHL-CPN10, PFAM = PF00166)' T '29.6' 'protein.folding' 'niben101scf08606_28310-42222' '(gnl|cdd|48152 : 876.0) no description available & (at3g20050 : 846.0) Encodes a putative cytoplasmic chaperonin that is similar to mouse Tcp-1 (t complex polypeptide 1).; T-complex protein 1 alpha subunit (TCP-1); FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin TCP-1, conserved site (InterPro:IPR002194), T-complex protein 1, alpha subunit (InterPro:IPR012715); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G11830.1); Has 17155 Blast hits to 17114 proteins in 3594 species: Archae - 808; Bacteria - 7960; Metazoa - 2159; Fungi - 1408; Plants - 801; Viruses - 0; Other Eukaryotes - 4019 (source: NCBI BLink). & (gnl|cdd|35581 : 718.0) no description available & (p54411|tcpe2_avesa : 227.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1692.0) & (original description: Putative CCT1, Description = T-complex protein 1 subunit alpha, PFAM = PF00118)' T '29.6' 'protein.folding' 'niben101scf08651_465223-468718' '(at5g20720 : 327.0) Encodes a chloroplast co-chaperonin with similarity to CPN21 from spinach, E.coli GroES.; chaperonin 20 (CPN20); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn10 (InterPro:IPR020818), GroES-like (InterPro:IPR011032), Chaperonin Cpn10, conserved site (InterPro:IPR018369), Chaperonin 21, chloroplast (InterPro:IPR017416), Chaperonin Cpn10, subgroup (InterPro:IPR001476); BEST Arabidopsis thaliana protein match is: chaperonin 10 (TAIR:AT1G14980.1). & (q02073|ch10c_spiol : 292.0) 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10) - Spinacia oleracea (Spinach) & (gnl|cdd|80634 : 115.0) no description available & (gnl|cdd|36854 : 106.0) no description available & (reliability: 654.0) & (original description: Putative pco135715c, Description = Chaperonin, PFAM = PF00166;PF00166)' T '29.6' 'protein.folding' 'niben101scf08651_466489-469346' '(at5g20720 : 188.0) Encodes a chloroplast co-chaperonin with similarity to CPN21 from spinach, E.coli GroES.; chaperonin 20 (CPN20); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn10 (InterPro:IPR020818), GroES-like (InterPro:IPR011032), Chaperonin Cpn10, conserved site (InterPro:IPR018369), Chaperonin 21, chloroplast (InterPro:IPR017416), Chaperonin Cpn10, subgroup (InterPro:IPR001476); BEST Arabidopsis thaliana protein match is: chaperonin 10 (TAIR:AT1G14980.1). & (q02073|ch10c_spiol : 170.0) 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10) - Spinacia oleracea (Spinach) & (gnl|cdd|80634 : 92.8) no description available & (gnl|cdd|36854 : 85.3) no description available & (reliability: 376.0) & (original description: Putative cp10, Description = 10 kDa chaperonin, PFAM = PF00166;PF00166)' T '29.6' 'protein.folding' 'niben101scf08898_65874-72731' '(at3g13470 : 853.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, protein refolding, cellular protein metabolic process; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: chaperonin 60 beta (TAIR:AT1G55490.2); Has 34219 Blast hits to 34175 proteins in 8725 species: Archae - 803; Bacteria - 21843; Metazoa - 1743; Fungi - 1612; Plants - 836; Viruses - 2; Other Eukaryotes - 7380 (source: NCBI BLink). & (p21241|rubb_brana : 834.0) RuBisCO large subunit-binding protein subunit beta, chloroplast precursor (60 kDa chaperonin subunit beta) (CPN-60 beta) - Brassica napus (Rape) & (gnl|cdd|80448 : 702.0) no description available & (gnl|cdd|35577 : 615.0) no description available & (reliability: 1706.0) & (original description: Putative cpnL, Description = 60 kDa chaperonin, PFAM = PF00118)' T '29.6' 'protein.folding' 'niben101scf09089_178903-185316' '(at5g06130 : 370.0) chaperone protein dnaJ-related; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G61670.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 740.0) & (original description: Putative dnaj, Description = Dnaj-like zinc-finger protein isoform, PFAM = )' T '29.6' 'protein.folding' 'niben101scf09262_143167-148889' '(at5g20720 : 314.0) Encodes a chloroplast co-chaperonin with similarity to CPN21 from spinach, E.coli GroES.; chaperonin 20 (CPN20); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn10 (InterPro:IPR020818), GroES-like (InterPro:IPR011032), Chaperonin Cpn10, conserved site (InterPro:IPR018369), Chaperonin 21, chloroplast (InterPro:IPR017416), Chaperonin Cpn10, subgroup (InterPro:IPR001476); BEST Arabidopsis thaliana protein match is: chaperonin 10 (TAIR:AT1G14980.1). & (q02073|ch10c_spiol : 290.0) 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10) - Spinacia oleracea (Spinach) & (gnl|cdd|80634 : 114.0) no description available & (gnl|cdd|36854 : 103.0) no description available & (reliability: 628.0) & (original description: Putative cp10, Description = 10 kDa chaperonin, PFAM = PF00166;PF00166)' T '29.6' 'protein.folding' 'niben101scf09363_23979-29438' '(at1g55490 : 840.0) encodes the beta subunit of the chloroplast chaperonin 60, a homologue of bacterial GroEL. Mutants in this gene develops lesions on its leaves, expresses systemic acquired resistance (SAR) and develops accelerated cell death to heat shock stress. The protein has molecular chaperone activity for suppressing protein aggregation in vitro.; chaperonin 60 beta (CPN60B); FUNCTIONS IN: protein binding; INVOLVED IN: protein folding, systemic acquired resistance, cell death, response to cold, chaperone mediated protein folding requiring cofactor; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G13470.1); Has 34209 Blast hits to 34175 proteins in 8723 species: Archae - 804; Bacteria - 21846; Metazoa - 1741; Fungi - 1612; Plants - 841; Viruses - 2; Other Eukaryotes - 7363 (source: NCBI BLink). & (p08927|rubb_pea : 829.0) RuBisCO large subunit-binding protein subunit beta, chloroplast precursor (60 kDa chaperonin subunit beta) (CPN-60 beta) - Pisum sativum (Garden pea) & (gnl|cdd|48161 : 706.0) no description available & (gnl|cdd|35577 : 612.0) no description available & (reliability: 1670.0) & (original description: Putative groL, Description = 60 kDa chaperonin, PFAM = PF00118)' T '29.6' 'protein.folding' 'niben101scf09516_75937-87979' '(at3g12340 : 248.0) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: chloroplast thylakoid lumen; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FK506 BINDING PROTEIN 53 (TAIR:AT4G25340.1); Has 13564 Blast hits to 11813 proteins in 1771 species: Archae - 96; Bacteria - 5418; Metazoa - 3305; Fungi - 956; Plants - 1045; Viruses - 29; Other Eukaryotes - 2715 (source: NCBI BLink). & (gnl|cdd|35772 : 125.0) no description available & (gnl|cdd|30891 : 107.0) no description available & (reliability: 496.0) & (original description: Putative PGSC0003DMG400012775, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00254)' T '29.6' 'protein.folding' 'niben101scf09928_108522-110025' '(p09189|hsp7c_pethy : 180.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at1g16030 : 176.0) heat shock protein 70B (Hsp70b); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: cytosol, cell wall, plasma membrane, chloroplast, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (TAIR:AT3G12580.1); Has 33913 Blast hits to 33562 proteins in 4835 species: Archae - 164; Bacteria - 16454; Metazoa - 3784; Fungi - 1785; Plants - 1262; Viruses - 309; Other Eukaryotes - 10155 (source: NCBI BLink). & (gnl|cdd|35323 : 146.0) no description available & (gnl|cdd|84440 : 101.0) no description available & (reliability: 348.0) & (original description: Putative Hsp70, Description = Heat shock protein 70, PFAM = PF00012)' T '29.6' 'protein.folding' 'niben101scf09928_110026-111838' '(p26413|hsp70_soybn : 424.0) Heat shock 70 kDa protein - Glycine max (Soybean) & (at3g12580 : 422.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (gnl|cdd|84440 : 394.0) no description available & (gnl|cdd|35324 : 385.0) no description available & (reliability: 838.0) & (original description: Putative hspB, Description = Heat shock protein 70, PFAM = PF00012)' T '29.6' 'protein.folding' 'niben101scf10126_73917-79701' '(at2g38000 : 535.0) chaperone protein dnaJ-related; Has 1004 Blast hits to 976 proteins in 392 species: Archae - 24; Bacteria - 688; Metazoa - 92; Fungi - 4; Plants - 51; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink). & (gnl|cdd|38024 : 370.0) no description available & (reliability: 1070.0) & (original description: Putative)' T '29.6' 'protein.folding' 'niben101scf10234_43275-48060' '(at3g17668 : 99.8) ENHANCER OF ATNSI ACTIVITY (ENA); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 136 Blast hits to 128 proteins in 43 species: Archae - 2; Bacteria - 19; Metazoa - 39; Fungi - 2; Plants - 45; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (reliability: 199.6) & (original description: Putative , Description = Protein disulfide-isomerase LQY1-like protein, PFAM = )' T '29.6' 'protein.folding' 'niben101scf10476_147171-152671' '(at3g60210 : 184.0) GroES-like family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn10 (InterPro:IPR020818), GroES-like (InterPro:IPR011032), Chaperonin Cpn10, subgroup (InterPro:IPR001476); BEST Arabidopsis thaliana protein match is: chloroplast chaperonin 10 (TAIR:AT2G44650.1); Has 3302 Blast hits to 3296 proteins in 900 species: Archae - 7; Bacteria - 1960; Metazoa - 11; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 1153 (source: NCBI BLink). & (gnl|cdd|36854 : 94.6) no description available & (reliability: 368.0) & (original description: Putative cpn10, Description = Chloroplast chaperonin 10, PFAM = PF00166)' T '29.6' 'protein.folding' 'niben101scf10796_12660-18746' '(at4g26555 : 132.0) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT4G19830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative T15N24, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = )' T '29.6' 'protein.folding' 'niben101scf11130_9026-16037' '(at2g34860 : 184.0) embryo sac development arrest 3 (EDA3); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: megagametogenesis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 773 Blast hits to 773 proteins in 260 species: Archae - 32; Bacteria - 427; Metazoa - 13; Fungi - 2; Plants - 175; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative EDA3, Description = DnaJ/Hsp40 cysteine-rich domain protein, PFAM = )' T '29.6' 'protein.folding' 'niben101scf11601_24266-26697' '(at3g22480 : 160.0) prefoldin 2 (PDF2); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin beta-like (InterPro:IPR002777), Prefoldin (InterPro:IPR009053); Has 423 Blast hits to 423 proteins in 206 species: Archae - 15; Bacteria - 0; Metazoa - 139; Fungi - 122; Plants - 68; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (gnl|cdd|39301 : 129.0) no description available & (reliability: 320.0) & (original description: Putative At3g22480, Description = Probable prefoldin subunit 2, PFAM = PF01920)' T '29.6' 'protein.folding' 'niben101scf11694_37076-41759' '(at5g20720 : 327.0) Encodes a chloroplast co-chaperonin with similarity to CPN21 from spinach, E.coli GroES.; chaperonin 20 (CPN20); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn10 (InterPro:IPR020818), GroES-like (InterPro:IPR011032), Chaperonin Cpn10, conserved site (InterPro:IPR018369), Chaperonin 21, chloroplast (InterPro:IPR017416), Chaperonin Cpn10, subgroup (InterPro:IPR001476); BEST Arabidopsis thaliana protein match is: chaperonin 10 (TAIR:AT1G14980.1). & (q02073|ch10c_spiol : 300.0) 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10) - Spinacia oleracea (Spinach) & (gnl|cdd|80634 : 113.0) no description available & (gnl|cdd|36854 : 109.0) no description available & (reliability: 654.0) & (original description: Putative CPN21, Description = 20 kDa chaperonin, chloroplastic, PFAM = PF00166;PF00166)' T '29.6' 'protein.folding' 'niben101scf11895_299376-307950' '(at5g55220 : 618.0) trigger factor type chaperone family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, C-terminal, bacterial (InterPro:IPR008880), Trigger factor (InterPro:IPR005215), Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80879 : 184.0) no description available & (reliability: 1236.0) & (original description: Putative TIG, Description = Trigger factor-like protein TIG, Chloroplastic, PFAM = PF05698;PF05697)' T '29.6' 'protein.folding' 'niben101scf12154_125691-130836' '(at5g02500 : 1067.0) encodes a member of heat shock protein 70 family.; heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cold, response to virus, response to heat; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p09189|hsp7c_pethy : 1067.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (gnl|cdd|35323 : 895.0) no description available & (gnl|cdd|84440 : 885.0) no description available & (reliability: 2134.0) & (original description: Putative LIM18, Description = HSP70, PFAM = PF00012)' T '29.6' 'protein.folding' 'niben101scf12414_408804-416371' '(at4g25340 : 273.0) Encodes a member of the FKBP-type immunophilin family that functions as a histone chaparone. Binds to 18S rDNA and represses its expression.; FK506 BINDING PROTEIN 53 (FKBP53); CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT5G05420.1). & (gnl|cdd|35772 : 130.0) no description available & (gnl|cdd|30891 : 124.0) no description available & (q41649|fkb15_vicfa : 89.4) FK506-binding protein 2 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (15 kDa FKBP) (FKBP-15) - Vicia faba (Broad bean) & (reliability: 546.0) & (original description: Putative FKBP53, Description = Peptidyl-prolyl cis-trans isomerase FKBP53, PFAM = PF00254)' T '29.6' 'protein.folding' 'niben101scf12801_61583-74553' '(at3g03960 : 863.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin TCP-1, conserved site (InterPro:IPR002194), T-complex protein 1, theta subunit (InterPro:IPR012721); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G18190.1); Has 15495 Blast hits to 15419 proteins in 3442 species: Archae - 801; Bacteria - 7598; Metazoa - 1836; Fungi - 1369; Plants - 680; Viruses - 0; Other Eukaryotes - 3211 (source: NCBI BLink). & (gnl|cdd|73352 : 675.0) no description available & (gnl|cdd|35583 : 663.0) no description available & (p54411|tcpe2_avesa : 189.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1726.0) & (original description: Putative CCT8, Description = T-complex protein 1 subunit theta, PFAM = PF00118)' T '29.6' 'protein.folding' 'niben101scf12868_62121-66949' '(p09189|hsp7c_pethy : 1097.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at3g12580 : 1094.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (gnl|cdd|35323 : 905.0) no description available & (gnl|cdd|84440 : 890.0) no description available & (reliability: 2186.0) & (original description: Putative HSP70, Description = Heat shock cognate 70 kDa protein, PFAM = PF00012)' T '29.6' 'protein.folding' 'niben101scf13595_64032-81113' '(at1g01230 : 269.0) ORMDL family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding; LOCATED IN: integral to membrane, endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ORMDL (InterPro:IPR007203); BEST Arabidopsis thaliana protein match is: ORMDL family protein (TAIR:AT5G42000.1); Has 538 Blast hits to 538 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 276; Fungi - 148; Plants - 90; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|38529 : 207.0) no description available & (gnl|cdd|67668 : 192.0) no description available & (reliability: 538.0) & (original description: Putative Sb06g025660, Description = Putative uncharacterized protein Sb06g025660, PFAM = PF04061)' T '29.6' 'protein.folding' 'niben101scf14922_20566-40680' '(at1g01230 : 239.0) ORMDL family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding; LOCATED IN: integral to membrane, endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ORMDL (InterPro:IPR007203); BEST Arabidopsis thaliana protein match is: ORMDL family protein (TAIR:AT5G42000.1); Has 538 Blast hits to 538 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 276; Fungi - 148; Plants - 90; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|38529 : 202.0) no description available & (gnl|cdd|67668 : 186.0) no description available & (reliability: 478.0) & (original description: Putative pco123957, Description = ORMDL family protein, PFAM = PF04061)' T '29.6' 'protein.folding' 'niben101scf15158_13697-20960' '(at1g26230 : 759.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein refolding, cellular protein metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: chaperonin 60 beta (TAIR:AT1G55490.2). & (p08927|rubb_pea : 667.0) RuBisCO large subunit-binding protein subunit beta, chloroplast precursor (60 kDa chaperonin subunit beta) (CPN-60 beta) - Pisum sativum (Garden pea) & (gnl|cdd|48161 : 615.0) no description available & (gnl|cdd|35577 : 558.0) no description available & (reliability: 1518.0) & (original description: Putative groL, Description = GroEL protein, PFAM = PF00118)' T '29.6' 'protein.folding' 'niben101scf15532_248584-254002' '(at4g26780 : 251.0) unknown function; AR192; FUNCTIONS IN: copper ion binding; INVOLVED IN: protein folding, protein import into mitochondrial matrix; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GrpE nucleotide exchange factor (InterPro:IPR000740), GrpE nucleotide exchange factor, head (InterPro:IPR009012), GrpE nucleotide exchange factor, coiled-coil (InterPro:IPR013805); BEST Arabidopsis thaliana protein match is: Co-chaperone GrpE family protein (TAIR:AT5G55200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38213 : 182.0) no description available & (gnl|cdd|85192 : 153.0) no description available & (reliability: 502.0) & (original description: Putative GrpE2, Description = GrpE protein homolog, PFAM = PF01025)' T '29.6' 'protein.folding' 'niben101scf29076_12606-19699' '(q05046|ch62_cucma : 896.0) Chaperonin CPN60-2, mitochondrial precursor (HSP60-2) - Cucurbita maxima (Pumpkin) (Winter squash) & (at3g23990 : 895.0) mitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria.; heat shock protein 60 (HSP60); FUNCTIONS IN: copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, response to cyclopentenone, chaperone-mediated protein complex assembly, response to heat, mitochondrion organization; LOCATED IN: cytosol, cytosolic ribosome, mitochondrion, plasma membrane, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: heat shock protein 60-2 (TAIR:AT2G33210.1); Has 33706 Blast hits to 33652 proteins in 8680 species: Archae - 676; Bacteria - 21745; Metazoa - 1618; Fungi - 1515; Plants - 790; Viruses - 2; Other Eukaryotes - 7360 (source: NCBI BLink). & (gnl|cdd|48161 : 793.0) no description available & (gnl|cdd|35577 : 693.0) no description available & (reliability: 1790.0) & (original description: Putative dmdA, Description = Protein Cpn60, PFAM = PF00118)' T '29.6' 'protein.folding' 'niben101scf36540_12771-16663' '(at4g39710 : 236.0) FK506-binding protein 16-2 (FKBP16-2); FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: chloroplast thylakoid membrane, chloroplast thylakoid lumen; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FK506-binding protein 13 (TAIR:AT5G45680.1). & (gnl|cdd|30891 : 112.0) no description available & (gnl|cdd|35769 : 108.0) no description available & (reliability: 472.0) & (original description: Putative FKBP13, Description = Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic, PFAM = PF00254)' T '29.6.1' 'protein.folding.prefoldin and trigger factor' '' '' '29.6.2' 'protein.folding.chaperones and co-chaperones' '' '' '29.6.2.1' 'protein.folding.chaperones and co-chaperones.small HSPs' '' '' '29.6.2.1.1' 'protein.folding.chaperones and co-chaperones.small HSPs.chaperones' '' '' '29.6.2.1.2' 'protein.folding.chaperones and co-chaperones.small HSPs.co-chaperones' '' '' '29.6.2.2' 'protein.folding.chaperones and co-chaperones.HSP60s' '' '' '29.6.2.2.1' 'protein.folding.chaperones and co-chaperones.HSP60s.cytosolic' '' '' '29.6.2.2.1.1' 'protein.folding.chaperones and co-chaperones.HSP60s.cytosolic.chaperones' '' '' '29.6.2.2.1.2' 'protein.folding.chaperones and co-chaperones.HSP60s.cytosolic.co-chaperones' '' '' '29.6.2.2.2' 'protein.folding.chaperones and co-chaperones.HSP60s.organelle' '' '' '29.6.2.2.2.1' 'protein.folding.chaperones and co-chaperones.HSP60s.organelle.chaperones' '' '' '29.6.2.2.2.2' 'protein.folding.chaperones and co-chaperones.HSP60s.organelle.co-chaperones' '' '' '29.6.2.3' 'protein.folding.chaperones and co-chaperones.HSP70s' '' '' '29.6.2.3.1' 'protein.folding.chaperones and co-chaperones.HSP70s.chaperones' '' '' '29.6.2.3.2' 'protein.folding.chaperones and co-chaperones.HSP70s.co-chaperones' '' '' '29.6.2.3.2.1' 'protein.folding.chaperones and co-chaperones.HSP70s.co-chaperones.nucleotide exchange factor' '' '' '29.6.2.3.2.2' 'protein.folding.chaperones and co-chaperones.HSP70s.co-chaperones.J-domain' '' '' '29.6.2.4' 'protein.folding.chaperones and co-chaperones.HSP90s' '' '' '29.6.2.4.1' 'protein.folding.chaperones and co-chaperones.HSP90s.chaperones' '' '' '29.6.2.4.2' 'protein.folding.chaperones and co-chaperones.HSP90s.co-chaperones' '' '' '29.6.2.5' 'protein.folding.chaperones and co-chaperones.HSP100s' '' '' '29.6.2.5.1' 'protein.folding.chaperones and co-chaperones.HSP100s.chaperones' '' '' '29.6.2.5.2' 'protein.folding.chaperones and co-chaperones.HSP100s.co-chaperones' '' '' '29.6.3' 'protein.folding.immunophilins (IMM)' '' '' '29.6.3.1' 'protein.folding.immunophilins (IMM).FKBPs' '' '' '29.6.3.2' 'protein.folding.immunophilins (IMM).cyclophilins' '' '' '29.7' 'protein.glycosylation' 'nbv0.3scaffold335_1-2830' '(at3g27540 : 305.0) beta-1,4-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 17 (InterPro:IPR006813); BEST Arabidopsis thaliana protein match is: beta-1,4-N-acetylglucosaminyltransferase family protein (TAIR:AT5G14480.1); Has 1196 Blast hits to 1196 proteins in 92 species: Archae - 0; Bacteria - 43; Metazoa - 59; Fungi - 34; Plants - 126; Viruses - 4; Other Eukaryotes - 930 (source: NCBI BLink). & (gnl|cdd|68302 : 232.0) no description available & (reliability: 570.0) & (original description: Putative poGNT3, Description = Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase, PFAM = PF04724)' T '29.7' 'protein.glycosylation' 'nbv0.3scaffold639_172-3218' '(at5g19980 : 449.0) Encodes a Golgi-localized nucleotide-sugar transporter.; golgi nucleotide sugar transporter 4 (GONST4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: golgi nucleotide sugar transporter 3 (TAIR:AT1G76340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36657 : 238.0) no description available & (reliability: 898.0) & (original description: Putative GONST4, Description = GDP-mannose transporter GONST4, PFAM = PF03151)' T '29.7' 'protein.glycosylation' 'nbv0.3scaffold2564_40489-44599' '(at1g12990 : 657.0) beta-1,4-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 17 (InterPro:IPR006813); BEST Arabidopsis thaliana protein match is: beta-1,4-N-acetylglucosaminyltransferase family protein (TAIR:AT1G67880.1); Has 1071 Blast hits to 1070 proteins in 91 species: Archae - 0; Bacteria - 41; Metazoa - 59; Fungi - 34; Plants - 127; Viruses - 4; Other Eukaryotes - 806 (source: NCBI BLink). & (gnl|cdd|68302 : 566.0) no description available & (reliability: 1288.0) & (original description: Putative poGNT3, Description = Beta 1,4 N-acetylglucosaminyltransferase, PFAM = PF04724)' T '29.7' 'protein.glycosylation' 'nbv0.3scaffold23217_12963-18399' '(at1g08280 : 379.0) Glycosyltransferase family 29 (sialyltransferase) family protein; FUNCTIONS IN: sialyltransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endomembrane system, integral to Golgi membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Sialyltransferase (InterPro:IPR012163), Glycosyl transferase, family 29 (InterPro:IPR001675); Has 2035 Blast hits to 2021 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 1803; Fungi - 0; Plants - 152; Viruses - 18; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|37903 : 147.0) no description available & (gnl|cdd|64632 : 92.4) no description available & (reliability: 758.0) & (original description: Putative stv1, Description = CAZy family GT29 glycosyltransferase, PFAM = PF00777)' T '29.7' 'protein.glycosylation' 'nbv0.3scaffold30499_12942-22257' '(at4g32120 : 482.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT2G25300.1); Has 596 Blast hits to 595 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 165; Fungi - 0; Plants - 427; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|37499 : 296.0) no description available & (gnl|cdd|85659 : 99.6) no description available & (reliability: 962.0) & (original description: Putative HPGT2, Description = Hydroxyproline O-galactosyltransferase HPGT2, PFAM = PF13334;PF01762)' T '29.7' 'protein.glycosylation' 'nbv0.3scaffold49984_6198-14539' '(at5g66680 : 566.0) Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins.; DEFECTIVE GLYCOSYLATION (DGL1); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: plant-type cell wall organization, protein amino acid N-linked glycosylation via asparagine, unidimensional cell growth; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit (InterPro:IPR005013); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37965 : 507.0) no description available & (gnl|cdd|66985 : 391.0) no description available & (reliability: 1132.0) & (original description: Putative OST48, Description = Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit, PFAM = PF03345)' T '29.7' 'protein.glycosylation' 'nbv0.3scaffold86279_573-3463' '(at5g57500 : 308.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT3G06440.1); Has 442 Blast hits to 440 proteins in 59 species: Archae - 0; Bacteria - 0; Metazoa - 117; Fungi - 23; Plants - 226; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|37498 : 106.0) no description available & (reliability: 616.0) & (original description: Putative hypro1, Description = Hexosyltransferase, PFAM = PF01762)' T '29.7' 'protein.glycosylation' 'nbv0.5scaffold2767_77633-87539' '(at2g47760 : 438.0) asparagine-linked glycosylation 3 (ALG3); CONTAINS InterPro DOMAIN/s: Glycosyltransferase, ALG3 (InterPro:IPR007873); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37973 : 388.0) no description available & (gnl|cdd|68768 : 376.0) no description available & (reliability: 876.0) & (original description: Putative ALG3, Description = Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase, PFAM = PF05208)' T '29.7' 'protein.glycosylation' 'nbv0.5scaffold3896_214289-220199' '(at5g62620 : 853.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, sugar binding, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G74800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37498 : 308.0) no description available & (gnl|cdd|85659 : 89.2) no description available & (reliability: 1680.0) & (original description: Putative GALT6, Description = Hydroxyproline O-galactosyltransferase GALT6, PFAM = PF01762;PF00337)' T '29.7' 'protein.glycosylation' 'nbv0.5scaffold4717_1669-8041' '(at1g20575 : 373.0) Nucleotide-diphospho-sugar transferases superfamily protein; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT2G39630.1); Has 22705 Blast hits to 22656 proteins in 2589 species: Archae - 933; Bacteria - 16103; Metazoa - 288; Fungi - 260; Plants - 98; Viruses - 23; Other Eukaryotes - 5000 (source: NCBI BLink). & (gnl|cdd|38189 : 338.0) no description available & (gnl|cdd|84843 : 117.0) no description available & (reliability: 746.0) & (original description: Putative DPM1, Description = Dolichol-phosphate mannosyltransferase subunit 1, PFAM = PF00535)' T '29.7' 'protein.glycosylation' 'niben044scf00003016ctg016_20376-32288' '(at3g04240 : 1561.0) Has O-linked N-acetyl glucosamine transferase activity. Similar to Arabidopsis SPY gene.; secret agent (SEC); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1); Has 114710 Blast hits to 35863 proteins in 2480 species: Archae - 3197; Bacteria - 54774; Metazoa - 16661; Fungi - 4580; Plants - 3873; Viruses - 0; Other Eukaryotes - 31625 (source: NCBI BLink). & (gnl|cdd|39826 : 1295.0) no description available & (gnl|cdd|33700 : 329.0) no description available & (o82422|spy_horvu : 269.0) Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-) (HvSPY) - Hordeum vulgare (Barley) & (reliability: 3122.0) & (original description: Putative SEC, Description = Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC, PFAM = PF13414;PF13414;PF13424;PF00515;PF00515;PF00515;PF13844;PF13844)' T '29.7' 'protein.glycosylation' 'niben044scf00004542ctg000_1182-4140' '(at1g77810 : 425.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, beta-1,3-galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: Golgi apparatus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G22015.1); Has 1466 Blast hits to 1450 proteins in 99 species: Archae - 0; Bacteria - 2; Metazoa - 868; Fungi - 0; Plants - 552; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|37499 : 319.0) no description available & (gnl|cdd|85659 : 126.0) no description available & (reliability: 850.0) & (original description: Putative LOC100192541, Description = Hexosyltransferase, PFAM = PF01762)' T '29.7' 'protein.glycosylation' 'niben044scf00009495ctg011_582-5812' '(at3g06440 : 607.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: galactosyltransferase1 (TAIR:AT1G26810.1); Has 2239 Blast hits to 2201 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 1648; Fungi - 5; Plants - 523; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|37498 : 271.0) no description available & (gnl|cdd|85659 : 118.0) no description available & (reliability: 1214.0) & (original description: Putative GALT3, Description = Hydroxyproline O-galactosyltransferase GALT3, PFAM = PF01762;PF00337)' T '29.7' 'protein.glycosylation' 'niben044scf00010044ctg007_6707-10368' '(at1g53290 : 298.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT3G14960.1); Has 1329 Blast hits to 1318 proteins in 99 species: Archae - 0; Bacteria - 2; Metazoa - 702; Fungi - 0; Plants - 592; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|37499 : 209.0) no description available & (reliability: 596.0) & (original description: Putative GalT1, Description = Hexosyltransferase, PFAM = PF01762)' T '29.7' 'protein.glycosylation' 'niben044scf00010044ctg009_792-4112' '(at1g53290 : 217.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT3G14960.1); Has 1329 Blast hits to 1318 proteins in 99 species: Archae - 0; Bacteria - 2; Metazoa - 702; Fungi - 0; Plants - 592; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|37499 : 136.0) no description available & (reliability: 434.0) & (original description: Putative GalT1, Description = Hexosyltransferase, PFAM = PF01762)' T '29.7' 'protein.glycosylation' 'niben044scf00013664ctg016_10551-14327' '(at1g27600 : 341.0) Encodes a member of the GT43 family glycosyltransferases involved in glucuronoxylan biosynthesis: AT2G37090 (IRX9) and AT1G27600 (IRX9-L or I9H, IRX9 homolog); AT4G36890 (IRX14) and AT5G67230 (IRX14-L or I14H, IRX14 homolog). They form two functionally non-redundant groups essential for the normal elongation of glucuronoxylan backbone. I9H functions redundantly with IRX9, I14H is redundant with IRX14. IRX9 or I9H do not complement IRX14, IRX14 or I14H do not complement IRX9.; IRREGULAR XYLEM 9-LIKE (IRX9-L); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 43 (InterPro:IPR005027); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT2G37090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|48336 : 244.0) no description available & (gnl|cdd|36689 : 214.0) no description available & (reliability: 682.0) & (original description: Putative IRX9H, Description = Probable beta-1,4-xylosyltransferase IRX9H, PFAM = PF03360)' T '29.7' 'protein.glycosylation' 'niben044scf00020103ctg000_123-8699' '(at3g48820 : 694.0) Encodes a homolog of the animal sialyltransferases but sialyltransferase activity was not detected (Plant Biology 2009, 11:284). Located in the Golgi apparatus.; Glycosyltransferase family 29 (sialyltransferase) family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, sialyltransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: Golgi apparatus, membrane; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 29 (InterPro:IPR001675); BEST Arabidopsis thaliana protein match is: MALE GAMETOPHYTE DEFECTIVE 2 (TAIR:AT1G08660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37903 : 168.0) no description available & (gnl|cdd|64632 : 81.2) no description available & (reliability: 1388.0) & (original description: Putative SIA2, Description = Sialyltransferase-like protein 2, PFAM = PF00777;PF00777)' T '29.7' 'protein.glycosylation' 'niben044scf00023511ctg014_445-6295' '(at1g05170 : 628.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT2G32430.1); Has 1305 Blast hits to 1290 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 665; Fungi - 0; Plants - 601; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|37499 : 415.0) no description available & (gnl|cdd|85659 : 171.0) no description available & (reliability: 1256.0) & (original description: Putative B3GALT2, Description = Probable beta-1,3-galactosyltransferase 2, PFAM = PF01762;PF13334)' T '29.7' 'protein.glycosylation' 'niben044scf00026436ctg000_5530-14310' '(at2g01720 : 551.0) Ribophorin I; FUNCTIONS IN: oligosaccharyl transferase activity, dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribophorin I (InterPro:IPR007676); BEST Arabidopsis thaliana protein match is: Ribophorin I (TAIR:AT1G76400.1); Has 386 Blast hits to 386 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 127; Plants - 63; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|68178 : 488.0) no description available & (gnl|cdd|37502 : 483.0) no description available & (reliability: 1102.0) & (original description: Putative OST1B, Description = Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B, PFAM = PF04597)' T '29.7' 'protein.glycosylation' 'niben044scf00030682ctg003_14566-19171' '(at1g33430 : 536.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: pollen exine formation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G32930.1). & (gnl|cdd|37499 : 386.0) no description available & (gnl|cdd|85659 : 150.0) no description available & (reliability: 1072.0) & (original description: Putative B3GALT8, Description = Probable beta-1,3-galactosyltransferase 8, PFAM = PF13334;PF01762)' T '29.7' 'protein.glycosylation' 'niben044scf00035030ctg010_1-3926' '(at1g11755 : 207.0) Encodes a cis-prenyltransferase, involved in dolichol biosynthesis. Wilted leaves in mutants due to cell membrane lesions. Mutants have increased drought tolerance, but hypersensitve to dark stress.; LEAF WILTING 1 (LEW1); CONTAINS InterPro DOMAIN/s: Di-trans-poly-cis-decaprenylcistransferase-like (InterPro:IPR001441); Has 155 Blast hits to 155 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 51; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative RTA, Description = Cis-prenyltransferase interacting protein, PFAM = )' T '29.7' 'protein.glycosylation' 'niben044scf00037674ctg010_546-7835' '(at4g18270 : 366.0) Encodes protein similar to similar to bacterial translocase I (mra Y). Expressed during flower bud development.; translocase 11 (TRANS11); CONTAINS InterPro DOMAIN/s: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site (InterPro:IPR018480), Phospho-N-acetylmuramoyl-pentapeptide transferase (InterPro:IPR003524), Glycosyl transferase, family 4 (InterPro:IPR000715), Glycosyl transferase, family 4, conserved region (InterPro:IPR018481); Has 1367 Blast hits to 1365 proteins in 548 species: Archae - 16; Bacteria - 1334; Metazoa - 1; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|80518 : 256.0) no description available & (reliability: 732.0) & (original description: Putative mraY, Description = Phospho-N-acetylmuramoyl-pentapeptide-transferase, PFAM = PF10555;PF00953)' T '29.7' 'protein.glycosylation' 'niben044scf00039745ctg010_2924-8734' '(gnl|cdd|37973 : 317.0) no description available & (at2g47760 : 295.0) asparagine-linked glycosylation 3 (ALG3); CONTAINS InterPro DOMAIN/s: Glycosyltransferase, ALG3 (InterPro:IPR007873); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68768 : 284.0) no description available & (reliability: 590.0) & (original description: Putative ALG3, Description = Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase, PFAM = PF05208)' T '29.7' 'protein.glycosylation' 'niben044scf00051830ctg000_12682-19221' '(at2g41490 : 535.0) UDP-GlcNAc:dolichol phosphate N-acetylglucosamine-1-phosphate transferase; UDP-glcnac-adolichol phosphate glcnac-1-p-transferase (GPT); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 4, conserved region (InterPro:IPR018481); BEST Arabidopsis thaliana protein match is: Glycosyl transferase family 4 protein (TAIR:AT3G57220.1); Has 6620 Blast hits to 6619 proteins in 2189 species: Archae - 133; Bacteria - 5202; Metazoa - 126; Fungi - 129; Plants - 61; Viruses - 0; Other Eukaryotes - 969 (source: NCBI BLink). & (gnl|cdd|37999 : 407.0) no description available & (gnl|cdd|85146 : 152.0) no description available & (reliability: 1070.0) & (original description: Putative alg7, Description = UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase, PFAM = PF00953)' T '29.7' 'protein.glycosylation' 'niben101scf00024_250572-255626' '(at5g62620 : 926.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, sugar binding, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G74800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37498 : 307.0) no description available & (gnl|cdd|84703 : 89.2) no description available & (reliability: 1780.0) & (original description: Putative BnaAnng17780D, Description = BnaAnng17780D protein, PFAM = PF01762;PF00337)' T '29.7' 'protein.glycosylation' 'niben101scf00025_8985-20892' '(at4g18270 : 341.0) Encodes protein similar to similar to bacterial translocase I (mra Y). Expressed during flower bud development.; translocase 11 (TRANS11); CONTAINS InterPro DOMAIN/s: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site (InterPro:IPR018480), Phospho-N-acetylmuramoyl-pentapeptide transferase (InterPro:IPR003524), Glycosyl transferase, family 4 (InterPro:IPR000715), Glycosyl transferase, family 4, conserved region (InterPro:IPR018481); Has 1367 Blast hits to 1365 proteins in 548 species: Archae - 16; Bacteria - 1334; Metazoa - 1; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|80518 : 253.0) no description available & (reliability: 682.0) & (original description: Putative mraY, Description = Phospho-N-acetylmuramoyl-pentapeptide-transferase, PFAM = PF10555;PF00953)' T '29.7' 'protein.glycosylation' 'niben101scf00087_423262-429212' '(at1g77810 : 531.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, beta-1,3-galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: Golgi apparatus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G22015.1); Has 1466 Blast hits to 1450 proteins in 99 species: Archae - 0; Bacteria - 2; Metazoa - 868; Fungi - 0; Plants - 552; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|37499 : 385.0) no description available & (gnl|cdd|85659 : 156.0) no description available & (reliability: 1062.0) & (original description: Putative B3GALT7, Description = Beta-1,3-galactosyltransferase 7, PFAM = PF13334;PF01762)' T '29.7' 'protein.glycosylation' 'niben101scf00376_354236-362652' '(at3g48820 : 716.0) Encodes a homolog of the animal sialyltransferases but sialyltransferase activity was not detected (Plant Biology 2009, 11:284). Located in the Golgi apparatus.; Glycosyltransferase family 29 (sialyltransferase) family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, sialyltransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: Golgi apparatus, membrane; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 29 (InterPro:IPR001675); BEST Arabidopsis thaliana protein match is: MALE GAMETOPHYTE DEFECTIVE 2 (TAIR:AT1G08660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37903 : 169.0) no description available & (gnl|cdd|64632 : 84.7) no description available & (reliability: 1432.0) & (original description: Putative SIA2, Description = Sialyltransferase-like protein 2, PFAM = PF00777;PF00777)' T '29.7' 'protein.glycosylation' 'niben101scf00435_301932-305763' '(at1g05170 : 330.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT2G32430.1); Has 1305 Blast hits to 1290 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 665; Fungi - 0; Plants - 601; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|37499 : 269.0) no description available & (gnl|cdd|85659 : 112.0) no description available & (reliability: 660.0) & (original description: Putative PYL11, Description = Hexosyltransferase, PFAM = PF01762)' T '29.7' 'protein.glycosylation' 'niben101scf00488_474652-480045' '(at5g62620 : 889.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, sugar binding, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G74800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37498 : 316.0) no description available & (gnl|cdd|84703 : 90.7) no description available & (reliability: 1714.0) & (original description: Putative GALT6, Description = Hydroxyproline O-galactosyltransferase GALT6, PFAM = PF00337;PF01762)' T '29.7' 'protein.glycosylation' 'niben101scf00543_211920-217880' '(at5g62620 : 877.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, sugar binding, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G74800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37498 : 313.0) no description available & (gnl|cdd|85659 : 91.9) no description available & (reliability: 1728.0) & (original description: Putative GALT5, Description = Hydroxyproline O-galactosyltransferase GALT5, PFAM = PF00337;PF01762)' T '29.7' 'protein.glycosylation' 'niben101scf00681_42826-47094' '(at3g27540 : 630.0) beta-1,4-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 17 (InterPro:IPR006813); BEST Arabidopsis thaliana protein match is: beta-1,4-N-acetylglucosaminyltransferase family protein (TAIR:AT5G14480.1); Has 1196 Blast hits to 1196 proteins in 92 species: Archae - 0; Bacteria - 43; Metazoa - 59; Fungi - 34; Plants - 126; Viruses - 4; Other Eukaryotes - 930 (source: NCBI BLink). & (gnl|cdd|68302 : 536.0) no description available & (reliability: 1206.0) & (original description: Putative poGNT3, Description = Beta 1,4 N-acetylglucosaminyltransferase, PFAM = PF04724)' T '29.7' 'protein.glycosylation' 'niben101scf00712_607220-626663' '(at1g76400 : 743.0) Ribophorin I; FUNCTIONS IN: oligosaccharyl transferase activity, dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribophorin I (InterPro:IPR007676); BEST Arabidopsis thaliana protein match is: Ribophorin I (TAIR:AT2G01720.1); Has 398 Blast hits to 398 proteins in 180 species: Archae - 2; Bacteria - 2; Metazoa - 149; Fungi - 127; Plants - 63; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|37502 : 589.0) no description available & (gnl|cdd|68178 : 513.0) no description available & (reliability: 1486.0) & (original description: Putative OST1A, Description = Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A, PFAM = PF04597)' T '29.7' 'protein.glycosylation' 'niben101scf00962_295487-320859' '(at1g77810 : 602.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, beta-1,3-galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: Golgi apparatus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G22015.1); Has 1466 Blast hits to 1450 proteins in 99 species: Archae - 0; Bacteria - 2; Metazoa - 868; Fungi - 0; Plants - 552; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|37499 : 404.0) no description available & (gnl|cdd|85659 : 156.0) no description available & (reliability: 1204.0) & (original description: Putative B3GALT7, Description = Beta-1,3-galactosyltransferase 7, PFAM = PF13334;PF01762)' T '29.7' 'protein.glycosylation' 'niben101scf01002_1145037-1154719' '(at1g53290 : 508.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT3G14960.1); Has 1329 Blast hits to 1318 proteins in 99 species: Archae - 0; Bacteria - 2; Metazoa - 702; Fungi - 0; Plants - 592; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|37499 : 343.0) no description available & (gnl|cdd|85659 : 100.0) no description available & (reliability: 1016.0) & (original description: Putative B3GALT14, Description = Probable beta-1,3-galactosyltransferase 14, PFAM = PF01762)' T '29.7' 'protein.glycosylation' 'niben101scf01049_269996-283806' '(at5g66680 : 645.0) Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins.; DEFECTIVE GLYCOSYLATION (DGL1); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: plant-type cell wall organization, protein amino acid N-linked glycosylation via asparagine, unidimensional cell growth; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit (InterPro:IPR005013); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37965 : 538.0) no description available & (gnl|cdd|66985 : 413.0) no description available & (reliability: 1290.0) & (original description: Putative OST48, Description = Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit, PFAM = PF03345)' T '29.7' 'protein.glycosylation' 'niben101scf01105_261600-275812' '(at2g01720 : 540.0) Ribophorin I; FUNCTIONS IN: oligosaccharyl transferase activity, dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribophorin I (InterPro:IPR007676); BEST Arabidopsis thaliana protein match is: Ribophorin I (TAIR:AT1G76400.1); Has 386 Blast hits to 386 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 127; Plants - 63; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|68178 : 493.0) no description available & (gnl|cdd|37502 : 488.0) no description available & (reliability: 1080.0) & (original description: Putative OST1B, Description = Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B, PFAM = PF04597)' T '29.7' 'protein.glycosylation' 'niben101scf01188_548541-561326' '(at3g04240 : 1573.0) Has O-linked N-acetyl glucosamine transferase activity. Similar to Arabidopsis SPY gene.; secret agent (SEC); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1); Has 114710 Blast hits to 35863 proteins in 2480 species: Archae - 3197; Bacteria - 54774; Metazoa - 16661; Fungi - 4580; Plants - 3873; Viruses - 0; Other Eukaryotes - 31625 (source: NCBI BLink). & (gnl|cdd|39826 : 1288.0) no description available & (gnl|cdd|33700 : 336.0) no description available & (o82422|spy_horvu : 288.0) Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-) (HvSPY) - Hordeum vulgare (Barley) & (reliability: 3146.0) & (original description: Putative SEC, Description = Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC, PFAM = PF13414;PF13844;PF13844;PF13424;PF00515;PF00515;PF00515;PF00515)' T '29.7' 'protein.glycosylation' 'niben101scf01269_1277586-1283296' '(at1g05170 : 650.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT2G32430.1); Has 1305 Blast hits to 1290 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 665; Fungi - 0; Plants - 601; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|37499 : 422.0) no description available & (gnl|cdd|85659 : 164.0) no description available & (reliability: 1300.0) & (original description: Putative B3GALT2, Description = Probable beta-1,3-galactosyltransferase 2, PFAM = PF01762;PF13334)' T '29.7' 'protein.glycosylation' 'niben101scf01334_696407-704436' '(at3g06440 : 622.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: galactosyltransferase1 (TAIR:AT1G26810.1); Has 2239 Blast hits to 2201 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 1648; Fungi - 5; Plants - 523; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|37498 : 276.0) no description available & (gnl|cdd|85659 : 118.0) no description available & (reliability: 1244.0) & (original description: Putative GALT3, Description = Hydroxyproline O-galactosyltransferase GALT3, PFAM = PF01762;PF00337)' T '29.7' 'protein.glycosylation' 'niben101scf01438_233878-236849' '(at5g57500 : 482.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT3G06440.1); Has 442 Blast hits to 440 proteins in 59 species: Archae - 0; Bacteria - 0; Metazoa - 117; Fungi - 23; Plants - 226; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|37498 : 136.0) no description available & (reliability: 964.0) & (original description: Putative hypro1, Description = Hexosyltransferase, PFAM = PF01762)' T '29.7' 'protein.glycosylation' 'niben101scf01521_1619718-1630850' '(at2g47760 : 478.0) asparagine-linked glycosylation 3 (ALG3); CONTAINS InterPro DOMAIN/s: Glycosyltransferase, ALG3 (InterPro:IPR007873); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37973 : 462.0) no description available & (gnl|cdd|68768 : 423.0) no description available & (reliability: 956.0) & (original description: Putative ALG3, Description = Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase, PFAM = PF05208)' T '29.7' 'protein.glycosylation' 'niben101scf02571_120588-125712' '(at5g62620 : 875.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, sugar binding, galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G74800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37498 : 307.0) no description available & (gnl|cdd|84703 : 102.0) no description available & (reliability: 1658.0) & (original description: Putative GALT6, Description = Hydroxyproline O-galactosyltransferase GALT6, PFAM = PF01762;PF00337)' T '29.7' 'protein.glycosylation' 'niben101scf02706_74247-118412' '(at2g25300 : 476.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G32120.1); Has 600 Blast hits to 599 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 168; Fungi - 0; Plants - 429; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|37499 : 293.0) no description available & (gnl|cdd|85659 : 100.0) no description available & (reliability: 952.0) & (original description: Putative HPGT2, Description = Hexosyltransferase, PFAM = PF01762;PF13334)' T '29.7' 'protein.glycosylation' 'niben101scf02785_65431-71152' '(at1g08280 : 382.0) Glycosyltransferase family 29 (sialyltransferase) family protein; FUNCTIONS IN: sialyltransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endomembrane system, integral to Golgi membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Sialyltransferase (InterPro:IPR012163), Glycosyl transferase, family 29 (InterPro:IPR001675); Has 2035 Blast hits to 2021 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 1803; Fungi - 0; Plants - 152; Viruses - 18; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|37903 : 148.0) no description available & (gnl|cdd|64632 : 91.6) no description available & (reliability: 764.0) & (original description: Putative stv1, Description = Sialyltransferase-like protein, PFAM = PF00777)' T '29.7' 'protein.glycosylation' 'niben101scf02858_177897-186918' '(at1g11755 : 206.0) Encodes a cis-prenyltransferase, involved in dolichol biosynthesis. Wilted leaves in mutants due to cell membrane lesions. Mutants have increased drought tolerance, but hypersensitve to dark stress.; LEAF WILTING 1 (LEW1); CONTAINS InterPro DOMAIN/s: Di-trans-poly-cis-decaprenylcistransferase-like (InterPro:IPR001441); Has 155 Blast hits to 155 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 51; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative RTA, Description = Cis-prenyltransferase interacting protein, PFAM = )' T '29.7' 'protein.glycosylation' 'niben101scf03045_1734517-1738809' '(at1g12990 : 661.0) beta-1,4-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 17 (InterPro:IPR006813); BEST Arabidopsis thaliana protein match is: beta-1,4-N-acetylglucosaminyltransferase family protein (TAIR:AT1G67880.1); Has 1071 Blast hits to 1070 proteins in 91 species: Archae - 0; Bacteria - 41; Metazoa - 59; Fungi - 34; Plants - 127; Viruses - 4; Other Eukaryotes - 806 (source: NCBI BLink). & (gnl|cdd|68302 : 572.0) no description available & (reliability: 1304.0) & (original description: Putative poGNT3, Description = Beta 1,4 N-acetylglucosaminyltransferase, PFAM = PF04724)' T '29.7' 'protein.glycosylation' 'niben101scf03143_524911-541888' '(at1g12990 : 657.0) beta-1,4-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 17 (InterPro:IPR006813); BEST Arabidopsis thaliana protein match is: beta-1,4-N-acetylglucosaminyltransferase family protein (TAIR:AT1G67880.1); Has 1071 Blast hits to 1070 proteins in 91 species: Archae - 0; Bacteria - 41; Metazoa - 59; Fungi - 34; Plants - 127; Viruses - 4; Other Eukaryotes - 806 (source: NCBI BLink). & (gnl|cdd|68302 : 567.0) no description available & (reliability: 1284.0) & (original description: Putative poGNT3, Description = Beta 1,4 N-acetylglucosaminyltransferase, PFAM = PF04724)' T '29.7' 'protein.glycosylation' 'niben101scf03210_65595-68119' '(at5g57500 : 192.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT3G06440.1); Has 442 Blast hits to 440 proteins in 59 species: Archae - 0; Bacteria - 0; Metazoa - 117; Fungi - 23; Plants - 226; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative PGSC0003DMG400000937, Description = Hexosyltransferase, PFAM = )' T '29.7' 'protein.glycosylation' 'niben101scf03338_143243-151660' '(at1g27600 : 444.0) Encodes a member of the GT43 family glycosyltransferases involved in glucuronoxylan biosynthesis: AT2G37090 (IRX9) and AT1G27600 (IRX9-L or I9H, IRX9 homolog); AT4G36890 (IRX14) and AT5G67230 (IRX14-L or I14H, IRX14 homolog). They form two functionally non-redundant groups essential for the normal elongation of glucuronoxylan backbone. I9H functions redundantly with IRX9, I14H is redundant with IRX14. IRX9 or I9H do not complement IRX14, IRX14 or I14H do not complement IRX9.; IRREGULAR XYLEM 9-LIKE (IRX9-L); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 43 (InterPro:IPR005027); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT2G37090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|48336 : 295.0) no description available & (gnl|cdd|36689 : 276.0) no description available & (reliability: 888.0) & (original description: Putative IRX9H, Description = Probable beta-1,4-xylosyltransferase IRX9H, PFAM = PF03360)' T '29.7' 'protein.glycosylation' 'niben101scf03439_76577-92211' '(at1g53290 : 482.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT3G14960.1); Has 1329 Blast hits to 1318 proteins in 99 species: Archae - 0; Bacteria - 2; Metazoa - 702; Fungi - 0; Plants - 592; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|37499 : 339.0) no description available & (gnl|cdd|85659 : 94.2) no description available & (reliability: 964.0) & (original description: Putative B3GALT14, Description = Probable beta-1,3-galactosyltransferase 14, PFAM = PF01762)' T '29.7' 'protein.glycosylation' 'niben101scf03497_1233622-1236704' '(at5g57500 : 482.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT3G06440.1); Has 442 Blast hits to 440 proteins in 59 species: Archae - 0; Bacteria - 0; Metazoa - 117; Fungi - 23; Plants - 226; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|37498 : 140.0) no description available & (reliability: 964.0) & (original description: Putative BnaC03g12910D, Description = Hexosyltransferase, PFAM = PF01762)' T '29.7' 'protein.glycosylation' 'niben101scf03710_319012-327636' '(at1g11755 : 235.0) Encodes a cis-prenyltransferase, involved in dolichol biosynthesis. Wilted leaves in mutants due to cell membrane lesions. Mutants have increased drought tolerance, but hypersensitve to dark stress.; LEAF WILTING 1 (LEW1); CONTAINS InterPro DOMAIN/s: Di-trans-poly-cis-decaprenylcistransferase-like (InterPro:IPR001441); Has 155 Blast hits to 155 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 51; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 470.0) & (original description: Putative LEW1, Description = Cis-prenyltransferase, dehydrodolichyl diphosphate synthase, PFAM = )' T '29.7' 'protein.glycosylation' 'niben101scf03723_290280-295992' '(at1g05170 : 633.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT2G32430.1); Has 1305 Blast hits to 1290 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 665; Fungi - 0; Plants - 601; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|37499 : 418.0) no description available & (gnl|cdd|85659 : 172.0) no description available & (reliability: 1266.0) & (original description: Putative B3GALT2, Description = Probable beta-1,3-galactosyltransferase 2, PFAM = PF13334;PF01762)' T '29.7' 'protein.glycosylation' 'niben101scf03864_48897-56051' '(at1g32930 : 600.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G05170.1); Has 1058 Blast hits to 1054 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 501; Fungi - 0; Plants - 540; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|37499 : 399.0) no description available & (gnl|cdd|85659 : 161.0) no description available & (reliability: 1200.0) & (original description: Putative GALT31A, Description = Beta-1,6-galactosyltransferase GALT31A, PFAM = PF01762;PF13334)' T '29.7' 'protein.glycosylation' 'niben101scf04177_577918-581924' '(at1g27600 : 339.0) Encodes a member of the GT43 family glycosyltransferases involved in glucuronoxylan biosynthesis: AT2G37090 (IRX9) and AT1G27600 (IRX9-L or I9H, IRX9 homolog); AT4G36890 (IRX14) and AT5G67230 (IRX14-L or I14H, IRX14 homolog). They form two functionally non-redundant groups essential for the normal elongation of glucuronoxylan backbone. I9H functions redundantly with IRX9, I14H is redundant with IRX14. IRX9 or I9H do not complement IRX14, IRX14 or I14H do not complement IRX9.; IRREGULAR XYLEM 9-LIKE (IRX9-L); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 43 (InterPro:IPR005027); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT2G37090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|48336 : 240.0) no description available & (gnl|cdd|36689 : 211.0) no description available & (reliability: 678.0) & (original description: Putative Os01g0675500, Description = Probable glucuronosyltransferase Os01g0675500, PFAM = PF03360)' T '29.7' 'protein.glycosylation' 'niben101scf04477_213743-221693' '(at4g26940 : 180.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G05170.1); Has 729 Blast hits to 729 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 285; Fungi - 1; Plants - 429; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|37499 : 100.0) no description available & (reliability: 334.0) & (original description: Putative PYL11, Description = Hexosyltransferase, PFAM = PF01762;PF13334)' T '29.7' 'protein.glycosylation' 'niben101scf04488_99741-112781' '(at3g04240 : 1621.0) Has O-linked N-acetyl glucosamine transferase activity. Similar to Arabidopsis SPY gene.; secret agent (SEC); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1); Has 114710 Blast hits to 35863 proteins in 2480 species: Archae - 3197; Bacteria - 54774; Metazoa - 16661; Fungi - 4580; Plants - 3873; Viruses - 0; Other Eukaryotes - 31625 (source: NCBI BLink). & (gnl|cdd|39826 : 1297.0) no description available & (gnl|cdd|33700 : 335.0) no description available & (q6yzi0|spy_orysa : 300.0) Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-) - Oryza sativa (Rice) & (reliability: 3242.0) & (original description: Putative SEC, Description = Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC, PFAM = PF13414;PF13844;PF13844;PF00515;PF00515;PF00515;PF00515;PF13181;PF13181;PF13181)' T '29.7' 'protein.glycosylation' 'niben101scf04688_211081-214244' '(at1g08280 : 316.0) Glycosyltransferase family 29 (sialyltransferase) family protein; FUNCTIONS IN: sialyltransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endomembrane system, integral to Golgi membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Sialyltransferase (InterPro:IPR012163), Glycosyl transferase, family 29 (InterPro:IPR001675); Has 2035 Blast hits to 2021 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 1803; Fungi - 0; Plants - 152; Viruses - 18; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|37903 : 139.0) no description available & (gnl|cdd|64632 : 85.5) no description available & (reliability: 632.0) & (original description: Putative stv1, Description = Sialyltransferase-like protein, PFAM = PF00777;PF00777)' T '29.7' 'protein.glycosylation' 'niben101scf05592_3729-14811' '(at1g20575 : 370.0) Nucleotide-diphospho-sugar transferases superfamily protein; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT2G39630.1); Has 22705 Blast hits to 22656 proteins in 2589 species: Archae - 933; Bacteria - 16103; Metazoa - 288; Fungi - 260; Plants - 98; Viruses - 23; Other Eukaryotes - 5000 (source: NCBI BLink). & (gnl|cdd|38189 : 336.0) no description available & (gnl|cdd|84843 : 117.0) no description available & (reliability: 740.0) & (original description: Putative DPM1, Description = Dolichol-phosphate mannosyltransferase subunit 1, PFAM = PF00535)' T '29.7' 'protein.glycosylation' 'niben101scf05883_10838-19221' '(at5g66680 : 588.0) Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins.; DEFECTIVE GLYCOSYLATION (DGL1); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: plant-type cell wall organization, protein amino acid N-linked glycosylation via asparagine, unidimensional cell growth; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit (InterPro:IPR005013); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37965 : 529.0) no description available & (gnl|cdd|66985 : 410.0) no description available & (reliability: 1176.0) & (original description: Putative OST48, Description = Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit, PFAM = PF03345)' T '29.7' 'protein.glycosylation' 'niben101scf06187_206238-215372' '(at1g08660 : 767.0) MALE GAMETOPHYTE DEFECTIVE 2 (MGP2); FUNCTIONS IN: transferase activity, transferring glycosyl groups, sialyltransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: Golgi apparatus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 29 (InterPro:IPR001675); BEST Arabidopsis thaliana protein match is: Glycosyltransferase family 29 (sialyltransferase) family protein (TAIR:AT3G48820.1); Has 1514 Blast hits to 1511 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 1320; Fungi - 0; Plants - 145; Viruses - 13; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|37903 : 103.0) no description available & (reliability: 1534.0) & (original description: Putative SIA1, Description = Sialyltransferase-like protein 1, PFAM = PF00777)' T '29.7' 'protein.glycosylation' 'niben101scf06525_143953-156542' '(at3g04240 : 1433.0) Has O-linked N-acetyl glucosamine transferase activity. Similar to Arabidopsis SPY gene.; secret agent (SEC); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1); Has 114710 Blast hits to 35863 proteins in 2480 species: Archae - 3197; Bacteria - 54774; Metazoa - 16661; Fungi - 4580; Plants - 3873; Viruses - 0; Other Eukaryotes - 31625 (source: NCBI BLink). & (gnl|cdd|39826 : 1183.0) no description available & (gnl|cdd|33700 : 338.0) no description available & (q6yzi0|spy_orysa : 295.0) Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-) - Oryza sativa (Rice) & (reliability: 2866.0) & (original description: Putative ogt, Description = UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit, PFAM = PF13844;PF13844;PF13181;PF13181;PF00515;PF00515;PF00515;PF00515;PF13414)' T '29.7' 'protein.glycosylation' 'niben101scf06525_145134-159506' '(at3g04240 : 1595.0) Has O-linked N-acetyl glucosamine transferase activity. Similar to Arabidopsis SPY gene.; secret agent (SEC); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1); Has 114710 Blast hits to 35863 proteins in 2480 species: Archae - 3197; Bacteria - 54774; Metazoa - 16661; Fungi - 4580; Plants - 3873; Viruses - 0; Other Eukaryotes - 31625 (source: NCBI BLink). & (gnl|cdd|39826 : 1297.0) no description available & (gnl|cdd|33700 : 337.0) no description available & (q6yzi0|spy_orysa : 294.0) Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-) - Oryza sativa (Rice) & (reliability: 3190.0) & (original description: Putative ogt, Description = UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit, PFAM = PF13844;PF13844;PF13181;PF13181;PF00515;PF00515;PF00515;PF00515;PF13414)' T '29.7' 'protein.glycosylation' 'niben101scf06649_62586-65632' '(at5g19980 : 447.0) Encodes a Golgi-localized nucleotide-sugar transporter.; golgi nucleotide sugar transporter 4 (GONST4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: golgi nucleotide sugar transporter 3 (TAIR:AT1G76340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36657 : 237.0) no description available & (reliability: 894.0) & (original description: Putative GONST4, Description = GDP-mannose transporter GONST4, PFAM = PF03151)' T '29.7' 'protein.glycosylation' 'niben101scf06778_601344-607574' '(at1g77810 : 526.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, beta-1,3-galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: Golgi apparatus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G22015.1); Has 1466 Blast hits to 1450 proteins in 99 species: Archae - 0; Bacteria - 2; Metazoa - 868; Fungi - 0; Plants - 552; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|37499 : 386.0) no description available & (gnl|cdd|85659 : 154.0) no description available & (reliability: 1052.0) & (original description: Putative B3GALT7, Description = Beta-1,3-galactosyltransferase 7, PFAM = PF13334;PF01762)' T '29.7' 'protein.glycosylation' 'niben101scf07788_536502-540549' '(at1g67880 : 623.0) beta-1,4-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 17 (InterPro:IPR006813); BEST Arabidopsis thaliana protein match is: beta-1,4-N-acetylglucosaminyltransferase family protein (TAIR:AT1G12990.1); Has 985 Blast hits to 984 proteins in 94 species: Archae - 0; Bacteria - 41; Metazoa - 63; Fungi - 34; Plants - 129; Viruses - 4; Other Eukaryotes - 714 (source: NCBI BLink). & (gnl|cdd|68302 : 556.0) no description available & (reliability: 1246.0) & (original description: Putative poGNT3, Description = Beta 1,4 N-acetylglucosaminyltransferase, PFAM = PF04724)' T '29.7' 'protein.glycosylation' 'niben101scf08175_160510-162878' '(at1g27600 : 154.0) Encodes a member of the GT43 family glycosyltransferases involved in glucuronoxylan biosynthesis: AT2G37090 (IRX9) and AT1G27600 (IRX9-L or I9H, IRX9 homolog); AT4G36890 (IRX14) and AT5G67230 (IRX14-L or I14H, IRX14 homolog). They form two functionally non-redundant groups essential for the normal elongation of glucuronoxylan backbone. I9H functions redundantly with IRX9, I14H is redundant with IRX14. IRX9 or I9H do not complement IRX14, IRX14 or I14H do not complement IRX9.; IRREGULAR XYLEM 9-LIKE (IRX9-L); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 43 (InterPro:IPR005027); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT2G37090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|48336 : 86.4) no description available & (reliability: 308.0) & (original description: Putative IRX9H, Description = Putative beta-1,4-xylosyltransferase IRX9H, PFAM = PF03360)' T '29.7' 'protein.glycosylation' 'niben101scf08698_210958-219222' '(at4g21060 : 941.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT5G62620.1); Has 2343 Blast hits to 2302 proteins in 116 species: Archae - 0; Bacteria - 6; Metazoa - 1700; Fungi - 8; Plants - 556; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|37498 : 294.0) no description available & (gnl|cdd|85659 : 99.2) no description available & (reliability: 1882.0) & (original description: Putative GALT2, Description = Hydroxyproline O-galactosyltransferase GALT2, PFAM = PF00337;PF01762)' T '29.7' 'protein.glycosylation' 'niben101scf08698_210961-218649' '(at4g21060 : 719.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT5G62620.1); Has 2343 Blast hits to 2302 proteins in 116 species: Archae - 0; Bacteria - 6; Metazoa - 1700; Fungi - 8; Plants - 556; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|37498 : 184.0) no description available & (reliability: 1438.0) & (original description: Putative GALT2, Description = Hydroxyproline O-galactosyltransferase GALT2, PFAM = PF00337;PF01762)' T '29.7' 'protein.glycosylation' 'niben101scf08776_26362-32494' '(at1g27600 : 343.0) Encodes a member of the GT43 family glycosyltransferases involved in glucuronoxylan biosynthesis: AT2G37090 (IRX9) and AT1G27600 (IRX9-L or I9H, IRX9 homolog); AT4G36890 (IRX14) and AT5G67230 (IRX14-L or I14H, IRX14 homolog). They form two functionally non-redundant groups essential for the normal elongation of glucuronoxylan backbone. I9H functions redundantly with IRX9, I14H is redundant with IRX14. IRX9 or I9H do not complement IRX14, IRX14 or I14H do not complement IRX9.; IRREGULAR XYLEM 9-LIKE (IRX9-L); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 43 (InterPro:IPR005027); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT2G37090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|48336 : 258.0) no description available & (gnl|cdd|36689 : 227.0) no description available & (reliability: 686.0) & (original description: Putative IRX9H, Description = Probable beta-1,4-xylosyltransferase IRX9H, PFAM = PF03360)' T '29.7' 'protein.glycosylation' 'niben101scf10086_403273-407128' '(at1g27600 : 314.0) Encodes a member of the GT43 family glycosyltransferases involved in glucuronoxylan biosynthesis: AT2G37090 (IRX9) and AT1G27600 (IRX9-L or I9H, IRX9 homolog); AT4G36890 (IRX14) and AT5G67230 (IRX14-L or I14H, IRX14 homolog). They form two functionally non-redundant groups essential for the normal elongation of glucuronoxylan backbone. I9H functions redundantly with IRX9, I14H is redundant with IRX14. IRX9 or I9H do not complement IRX14, IRX14 or I14H do not complement IRX9.; IRREGULAR XYLEM 9-LIKE (IRX9-L); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 43 (InterPro:IPR005027); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT2G37090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|48336 : 233.0) no description available & (gnl|cdd|36689 : 203.0) no description available & (reliability: 628.0) & (original description: Putative gt43, Description = Beta3-glucuronyltransferase, PFAM = PF03360)' T '29.7' 'protein.glycosylation' 'niben101scf11084_368364-378002' '(at2g41490 : 502.0) UDP-GlcNAc:dolichol phosphate N-acetylglucosamine-1-phosphate transferase; UDP-glcnac-adolichol phosphate glcnac-1-p-transferase (GPT); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 4, conserved region (InterPro:IPR018481); BEST Arabidopsis thaliana protein match is: Glycosyl transferase family 4 protein (TAIR:AT3G57220.1); Has 6620 Blast hits to 6619 proteins in 2189 species: Archae - 133; Bacteria - 5202; Metazoa - 126; Fungi - 129; Plants - 61; Viruses - 0; Other Eukaryotes - 969 (source: NCBI BLink). & (gnl|cdd|37999 : 403.0) no description available & (gnl|cdd|85146 : 151.0) no description available & (reliability: 1004.0) & (original description: Putative alg7, Description = UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase, PFAM = PF00953)' T '29.7' 'protein.glycosylation' 'niben101scf21257_20753-33887' '(at5g66680 : 486.0) Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins.; DEFECTIVE GLYCOSYLATION (DGL1); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: plant-type cell wall organization, protein amino acid N-linked glycosylation via asparagine, unidimensional cell growth; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit (InterPro:IPR005013); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37965 : 454.0) no description available & (gnl|cdd|66985 : 347.0) no description available & (reliability: 972.0) & (original description: Putative OST48, Description = Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit, PFAM = PF03345)' T '29.7.1' 'protein.glycosylation.mannosyl-oligosaccharide glucosidase I' '' '' '29.7.2' 'protein.glycosylation.mannosyl-oligosaccharide glucosidase II' '' '' '29.7.3' 'protein.glycosylation.mannosyl-oligosaccharide alpha-1,2-mannosidase' 'nbv0.5scaffold1309_53595-71368' '(at1g51590 : 815.0) Encodes an alpha-mannosidase I enzyme responsible for N-glycan maturation.; alpha-mannosidase 1 (MNS1); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 47 (InterPro:IPR001382); BEST Arabidopsis thaliana protein match is: alpha-mannosidase 2 (TAIR:AT3G21160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37415 : 566.0) no description available & (gnl|cdd|85516 : 447.0) no description available & (reliability: 1630.0) & (original description: Putative 13888, Description = alpha-1,2-Mannosidase, PFAM = PF01532)' T '29.7.3' 'protein.glycosylation.mannosyl-oligosaccharide alpha-1,2-mannosidase' 'niben101scf00234_309358-328866' '(at1g51590 : 837.0) Encodes an alpha-mannosidase I enzyme responsible for N-glycan maturation.; alpha-mannosidase 1 (MNS1); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 47 (InterPro:IPR001382); BEST Arabidopsis thaliana protein match is: alpha-mannosidase 2 (TAIR:AT3G21160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37415 : 581.0) no description available & (gnl|cdd|85516 : 459.0) no description available & (reliability: 1674.0) & (original description: Putative MNS1, Description = Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1, PFAM = PF01532)' T '29.7.3' 'protein.glycosylation.mannosyl-oligosaccharide alpha-1,2-mannosidase' 'niben101scf03039_423236-436497' '(at1g51590 : 814.0) Encodes an alpha-mannosidase I enzyme responsible for N-glycan maturation.; alpha-mannosidase 1 (MNS1); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 47 (InterPro:IPR001382); BEST Arabidopsis thaliana protein match is: alpha-mannosidase 2 (TAIR:AT3G21160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37415 : 568.0) no description available & (gnl|cdd|85516 : 463.0) no description available & (reliability: 1628.0) & (original description: Putative man1a1, Description = alpha-1,2-Mannosidase, PFAM = PF01532)' T '29.7.3' 'protein.glycosylation.mannosyl-oligosaccharide alpha-1,2-mannosidase' 'niben101scf06499_114782-124064' '(at1g51590 : 779.0) Encodes an alpha-mannosidase I enzyme responsible for N-glycan maturation.; alpha-mannosidase 1 (MNS1); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 47 (InterPro:IPR001382); BEST Arabidopsis thaliana protein match is: alpha-mannosidase 2 (TAIR:AT3G21160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37415 : 565.0) no description available & (gnl|cdd|85516 : 463.0) no description available & (reliability: 1558.0) & (original description: Putative MAN1A1, Description = Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA, PFAM = PF01532)' T '29.7.3' 'protein.glycosylation.mannosyl-oligosaccharide alpha-1,2-mannosidase' 'niben101scf07741_417760-436983' '(at1g51590 : 841.0) Encodes an alpha-mannosidase I enzyme responsible for N-glycan maturation.; alpha-mannosidase 1 (MNS1); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 47 (InterPro:IPR001382); BEST Arabidopsis thaliana protein match is: alpha-mannosidase 2 (TAIR:AT3G21160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37415 : 575.0) no description available & (gnl|cdd|85516 : 455.0) no description available & (reliability: 1682.0) & (original description: Putative MNS1, Description = Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1, PFAM = PF01532)' T '29.7.4' 'protein.glycosylation.UDP-glucose glycoprotein glucosyltransferase' 'nbv0.5scaffold609_381094-384021' '(at1g71220 : 296.0) Encodes UDP-glucose:glycoprotein glucosyltransferase. Non-receptor component required for EFR-mediated immunity. Mutants show de-repressed anthocyanin accumulation in the presence of elf18, and EFR accumulation and signalling.; EMS-mutagenized bri1 suppressor 1 (EBS1); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495), UDP-glucose:Glycoprotein Glucosyltransferase (InterPro:IPR009448). & (gnl|cdd|37090 : 208.0) no description available & (gnl|cdd|69921 : 173.0) no description available & (reliability: 592.0) & (original description: Putative v1g142868, Description = Predicted protein, PFAM = PF06427)' T '29.7.4' 'protein.glycosylation.UDP-glucose glycoprotein glucosyltransferase' 'niben101scf02122_226779-251953' '(at1g71220 : 2184.0) Encodes UDP-glucose:glycoprotein glucosyltransferase. Non-receptor component required for EFR-mediated immunity. Mutants show de-repressed anthocyanin accumulation in the presence of elf18, and EFR accumulation and signalling.; EMS-mutagenized bri1 suppressor 1 (EBS1); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495), UDP-glucose:Glycoprotein Glucosyltransferase (InterPro:IPR009448). & (gnl|cdd|37090 : 1449.0) no description available & (gnl|cdd|69921 : 246.0) no description available & (reliability: 4368.0) & (original description: Putative UGGT, Description = UDP-glucose:glycoprotein glucosyltransferase, PFAM = PF06427)' T '29.7.4' 'protein.glycosylation.UDP-glucose glycoprotein glucosyltransferase' 'niben101scf02122_245539-248466' '(at1g71220 : 299.0) Encodes UDP-glucose:glycoprotein glucosyltransferase. Non-receptor component required for EFR-mediated immunity. Mutants show de-repressed anthocyanin accumulation in the presence of elf18, and EFR accumulation and signalling.; EMS-mutagenized bri1 suppressor 1 (EBS1); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495), UDP-glucose:Glycoprotein Glucosyltransferase (InterPro:IPR009448). & (gnl|cdd|37090 : 210.0) no description available & (gnl|cdd|69921 : 175.0) no description available & (reliability: 598.0) & (original description: Putative v1g142868, Description = Predicted protein, PFAM = PF06427)' T '29.7.4' 'protein.glycosylation.UDP-glucose glycoprotein glucosyltransferase' 'niben101scf03468_410058-436010' '(at1g71220 : 2175.0) Encodes UDP-glucose:glycoprotein glucosyltransferase. Non-receptor component required for EFR-mediated immunity. Mutants show de-repressed anthocyanin accumulation in the presence of elf18, and EFR accumulation and signalling.; EMS-mutagenized bri1 suppressor 1 (EBS1); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495), UDP-glucose:Glycoprotein Glucosyltransferase (InterPro:IPR009448). & (gnl|cdd|37090 : 1449.0) no description available & (gnl|cdd|69921 : 245.0) no description available & (reliability: 4350.0) & (original description: Putative UGGT, Description = UDP-glucose:glycoprotein glucosyltransferase, PFAM = PF06427)' T '29.7.5' 'protein.glycosylation.alpha-1,3-mannosyl-glycoprotein-beta-1,2-N-acetylglucosaminyltransferase(GnTI)' 'nbv0.3scaffold6737_49149-58567' '(at3g55260 : 652.0) Encodes a protein with β-hexosaminidase activity (the enzyme is active with p-nitrophenyl-β-N-acetylglucosaminide as substrate but displayed only a minor activity toward p-nitrophenyl-β-N-acetylgalactosaminide). The enzyme displays no distinct preference for a specific terminal GlcNAc residue and indeed cleaved the asialoagalactodabsylglycopeptide GnGn to a mixture of products.; beta-hexosaminidase 1 (HEXO1); FUNCTIONS IN: hexosaminidase activity, beta-N-acetylhexosaminidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 20, catalytic core (InterPro:IPR015883), Beta-N-acetylhexosaminidase, subunit a/b (InterPro:IPR015882), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 20 (InterPro:IPR001540), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-hexosaminidase 3 (TAIR:AT1G65590.1); Has 3779 Blast hits to 3705 proteins in 735 species: Archae - 2; Bacteria - 2420; Metazoa - 475; Fungi - 222; Plants - 128; Viruses - 0; Other Eukaryotes - 532 (source: NCBI BLink). & (gnl|cdd|37710 : 460.0) no description available & (gnl|cdd|84986 : 276.0) no description available & (reliability: 1304.0) & (original description: Putative 18960, Description = Predicted protein, PFAM = PF00728)' T '29.7.5' 'protein.glycosylation.alpha-1,3-mannosyl-glycoprotein-beta-1,2-N-acetylglucosaminyltransferase(GnTI)' 'nbv0.5scaffold28_959493-966841' '(at1g05590 : 752.0) Encodes a protein with β-hexosaminidase activity (the enzyme is active with p-nitrophenyl-β-N-acetylglucosaminide as substrate but displayed only a minor activity toward p-nitrophenyl-β-N-acetylgalactosaminide). Chitotriose-PA was digested almost completely overnight by a 50% ammonium sulfate fraction of a supernatant yeast expressing AtHEX3.; beta-hexosaminidase 2 (HEXO2); FUNCTIONS IN: UDP-glucosyltransferase activity, hexosaminidase activity, beta-N-acetylhexosaminidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 20, catalytic core (InterPro:IPR015883), Beta-N-acetylhexosaminidase, subunit a/b (InterPro:IPR015882), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 20 (InterPro:IPR001540), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-hexosaminidase 1 (TAIR:AT3G55260.1); Has 3806 Blast hits to 3725 proteins in 709 species: Archae - 2; Bacteria - 2403; Metazoa - 477; Fungi - 234; Plants - 128; Viruses - 0; Other Eukaryotes - 562 (source: NCBI BLink). & (gnl|cdd|37710 : 499.0) no description available & (gnl|cdd|84986 : 324.0) no description available & (reliability: 1504.0) & (original description: Putative HEXO2, Description = Beta-hexosaminidase 2, PFAM = PF14845;PF00728)' T '29.7.5' 'protein.glycosylation.alpha-1,3-mannosyl-glycoprotein-beta-1,2-N-acetylglucosaminyltransferase(GnTI)' 'nbv0.5scaffold1022_263182-275846' '(at3g55260 : 784.0) Encodes a protein with β-hexosaminidase activity (the enzyme is active with p-nitrophenyl-β-N-acetylglucosaminide as substrate but displayed only a minor activity toward p-nitrophenyl-β-N-acetylgalactosaminide). The enzyme displays no distinct preference for a specific terminal GlcNAc residue and indeed cleaved the asialoagalactodabsylglycopeptide GnGn to a mixture of products.; beta-hexosaminidase 1 (HEXO1); FUNCTIONS IN: hexosaminidase activity, beta-N-acetylhexosaminidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 20, catalytic core (InterPro:IPR015883), Beta-N-acetylhexosaminidase, subunit a/b (InterPro:IPR015882), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 20 (InterPro:IPR001540), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-hexosaminidase 3 (TAIR:AT1G65590.1); Has 3779 Blast hits to 3705 proteins in 735 species: Archae - 2; Bacteria - 2420; Metazoa - 475; Fungi - 222; Plants - 128; Viruses - 0; Other Eukaryotes - 532 (source: NCBI BLink). & (gnl|cdd|37710 : 518.0) no description available & (gnl|cdd|84986 : 270.0) no description available & (reliability: 1568.0) & (original description: Putative HEXO1, Description = Beta-hexosaminidase 1, PFAM = PF00728;PF14845)' T '29.7.5' 'protein.glycosylation.alpha-1,3-mannosyl-glycoprotein-beta-1,2-N-acetylglucosaminyltransferase(GnTI)' 'niben044scf00003864ctg021_2076-11648' '(at1g65590 : 770.0) Encodes a protein with beta-hexosaminidase activity. Located on the plasma membrane.; beta-hexosaminidase 3 (HEXO3); FUNCTIONS IN: hexosaminidase activity, beta-N-acetylhexosaminidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plasma membrane, plant-type cell wall; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 20, catalytic core (InterPro:IPR015883), Beta-N-acetylhexosaminidase, subunit a/b (InterPro:IPR015882), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 20 (InterPro:IPR001540), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-hexosaminidase 1 (TAIR:AT3G55260.1); Has 3849 Blast hits to 3760 proteins in 723 species: Archae - 6; Bacteria - 2490; Metazoa - 475; Fungi - 225; Plants - 125; Viruses - 0; Other Eukaryotes - 528 (source: NCBI BLink). & (gnl|cdd|37710 : 454.0) no description available & (gnl|cdd|84986 : 309.0) no description available & (reliability: 1540.0) & (original description: Putative 18960, Description = Predicted protein, PFAM = PF14845;PF00728)' T '29.7.5' 'protein.glycosylation.alpha-1,3-mannosyl-glycoprotein-beta-1,2-N-acetylglucosaminyltransferase(GnTI)' 'niben101scf00747_1200158-1207943' '(at5g50420 : 677.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G17270.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1288.0) & (original description: Putative fut13, Description = GDP-fucose protein-O-fucosyltransferase 2, PFAM = PF10250)' T '29.7.5' 'protein.glycosylation.alpha-1,3-mannosyl-glycoprotein-beta-1,2-N-acetylglucosaminyltransferase(GnTI)' 'niben101scf01176_163863-176264' '(at4g38240 : 689.0) Encodes N-acetyl glucosaminyl transferase I, the first enzyme in the pathway of complex glycan biosynthesis.; COMPLEX GLYCAN LESS 1 (CGL1); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 13 (InterPro:IPR004139). & (gnl|cdd|86231 : 670.0) no description available & (gnl|cdd|36627 : 442.0) no description available & (reliability: 1378.0) & (original description: Putative GNTI, Description = Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, PFAM = PF03071)' T '29.7.5' 'protein.glycosylation.alpha-1,3-mannosyl-glycoprotein-beta-1,2-N-acetylglucosaminyltransferase(GnTI)' 'niben101scf01283_118807-124317' '(at5g50420 : 622.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G17270.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1184.0) & (original description: Putative fut13, Description = GDP-fucose protein-O-fucosyltransferase 2, PFAM = PF10250)' T '29.7.5' 'protein.glycosylation.alpha-1,3-mannosyl-glycoprotein-beta-1,2-N-acetylglucosaminyltransferase(GnTI)' 'niben101scf02405_194500-201529' '(at1g65590 : 769.0) Encodes a protein with beta-hexosaminidase activity. Located on the plasma membrane.; beta-hexosaminidase 3 (HEXO3); FUNCTIONS IN: hexosaminidase activity, beta-N-acetylhexosaminidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plasma membrane, plant-type cell wall; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 20, catalytic core (InterPro:IPR015883), Beta-N-acetylhexosaminidase, subunit a/b (InterPro:IPR015882), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 20 (InterPro:IPR001540), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-hexosaminidase 1 (TAIR:AT3G55260.1); Has 3849 Blast hits to 3760 proteins in 723 species: Archae - 6; Bacteria - 2490; Metazoa - 475; Fungi - 225; Plants - 125; Viruses - 0; Other Eukaryotes - 528 (source: NCBI BLink). & (gnl|cdd|37710 : 455.0) no description available & (gnl|cdd|84986 : 304.0) no description available & (reliability: 1538.0) & (original description: Putative HEXO3, Description = Beta-hexosaminidase 3, PFAM = PF00728;PF14845)' T '29.7.5' 'protein.glycosylation.alpha-1,3-mannosyl-glycoprotein-beta-1,2-N-acetylglucosaminyltransferase(GnTI)' 'niben101scf03794_129894-143607' '(at3g55260 : 799.0) Encodes a protein with β-hexosaminidase activity (the enzyme is active with p-nitrophenyl-β-N-acetylglucosaminide as substrate but displayed only a minor activity toward p-nitrophenyl-β-N-acetylgalactosaminide). The enzyme displays no distinct preference for a specific terminal GlcNAc residue and indeed cleaved the asialoagalactodabsylglycopeptide GnGn to a mixture of products.; beta-hexosaminidase 1 (HEXO1); FUNCTIONS IN: hexosaminidase activity, beta-N-acetylhexosaminidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 20, catalytic core (InterPro:IPR015883), Beta-N-acetylhexosaminidase, subunit a/b (InterPro:IPR015882), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 20 (InterPro:IPR001540), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-hexosaminidase 3 (TAIR:AT1G65590.1); Has 3779 Blast hits to 3705 proteins in 735 species: Archae - 2; Bacteria - 2420; Metazoa - 475; Fungi - 222; Plants - 128; Viruses - 0; Other Eukaryotes - 532 (source: NCBI BLink). & (gnl|cdd|37710 : 519.0) no description available & (gnl|cdd|84986 : 268.0) no description available & (reliability: 1598.0) & (original description: Putative Os05g0415700, Description = Beta-hexosaminidase, PFAM = PF00728;PF14845)' T '29.7.5' 'protein.glycosylation.alpha-1,3-mannosyl-glycoprotein-beta-1,2-N-acetylglucosaminyltransferase(GnTI)' 'niben101scf04294_670763-675176' '(at4g38240 : 258.0) Encodes N-acetyl glucosaminyl transferase I, the first enzyme in the pathway of complex glycan biosynthesis.; COMPLEX GLYCAN LESS 1 (CGL1); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 13 (InterPro:IPR004139). & (gnl|cdd|86231 : 256.0) no description available & (gnl|cdd|36627 : 180.0) no description available & (reliability: 516.0) & (original description: Putative gntI, Description = Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, PFAM = PF03071)' T '29.7.6' 'protein.glycosylation.beta-1,4-mannosyl-glucoprotein-beta-1,4-N-acetylglucosaminyltransferase' '' '' '29.7.7' 'protein.glycosylation.mannosyl-oligosaccharide-1,3-1,6-alpha-mannosidase(GMII)' 'niben044scf00044664ctg000_29584-40351' '(at5g14950 : 1627.0) Encodes a golgi alpha-mannosidase, an enzyme responsible for the formation of major complex-type N-glycans.; golgi alpha-mannosidase II (GMII); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Glycoside hydrolase/deacetylase, beta/alpha-barrel (InterPro:IPR011330), Glycoside hydrolase, family 38, central domain (InterPro:IPR015341), Glycoside hydrolase, family 38, core (InterPro:IPR000602), Glycosyl hydrolases 38, C-terminal (InterPro:IPR011682); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 38 protein (TAIR:AT5G66150.1); Has 2033 Blast hits to 1987 proteins in 497 species: Archae - 20; Bacteria - 870; Metazoa - 708; Fungi - 131; Plants - 147; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|37169 : 1176.0) no description available & (gnl|cdd|85226 : 262.0) no description available & (reliability: 3254.0) & (original description: Putative GMII, Description = Alpha-mannosidase 2, PFAM = PF01074;PF07748;PF09261)' T '29.7.8' 'protein.glycosylation.alpha-1,6-mannosyl-glycoprotein-beta-1,2-N-acetylglucosaminyltransferase(GnTII)' 'nbv0.3scaffold6737_49149-58567' '(at3g55260 : 652.0) Encodes a protein with β-hexosaminidase activity (the enzyme is active with p-nitrophenyl-β-N-acetylglucosaminide as substrate but displayed only a minor activity toward p-nitrophenyl-β-N-acetylgalactosaminide). The enzyme displays no distinct preference for a specific terminal GlcNAc residue and indeed cleaved the asialoagalactodabsylglycopeptide GnGn to a mixture of products.; beta-hexosaminidase 1 (HEXO1); FUNCTIONS IN: hexosaminidase activity, beta-N-acetylhexosaminidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 20, catalytic core (InterPro:IPR015883), Beta-N-acetylhexosaminidase, subunit a/b (InterPro:IPR015882), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 20 (InterPro:IPR001540), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-hexosaminidase 3 (TAIR:AT1G65590.1); Has 3779 Blast hits to 3705 proteins in 735 species: Archae - 2; Bacteria - 2420; Metazoa - 475; Fungi - 222; Plants - 128; Viruses - 0; Other Eukaryotes - 532 (source: NCBI BLink). & (gnl|cdd|37710 : 460.0) no description available & (gnl|cdd|84986 : 276.0) no description available & (reliability: 1304.0) & (original description: Putative 18960, Description = Predicted protein, PFAM = PF00728)' T '29.7.8' 'protein.glycosylation.alpha-1,6-mannosyl-glycoprotein-beta-1,2-N-acetylglucosaminyltransferase(GnTII)' 'nbv0.5scaffold28_959493-966841' '(at1g05590 : 752.0) Encodes a protein with β-hexosaminidase activity (the enzyme is active with p-nitrophenyl-β-N-acetylglucosaminide as substrate but displayed only a minor activity toward p-nitrophenyl-β-N-acetylgalactosaminide). Chitotriose-PA was digested almost completely overnight by a 50% ammonium sulfate fraction of a supernatant yeast expressing AtHEX3.; beta-hexosaminidase 2 (HEXO2); FUNCTIONS IN: UDP-glucosyltransferase activity, hexosaminidase activity, beta-N-acetylhexosaminidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 20, catalytic core (InterPro:IPR015883), Beta-N-acetylhexosaminidase, subunit a/b (InterPro:IPR015882), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 20 (InterPro:IPR001540), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-hexosaminidase 1 (TAIR:AT3G55260.1); Has 3806 Blast hits to 3725 proteins in 709 species: Archae - 2; Bacteria - 2403; Metazoa - 477; Fungi - 234; Plants - 128; Viruses - 0; Other Eukaryotes - 562 (source: NCBI BLink). & (gnl|cdd|37710 : 499.0) no description available & (gnl|cdd|84986 : 324.0) no description available & (reliability: 1504.0) & (original description: Putative HEXO2, Description = Beta-hexosaminidase 2, PFAM = PF14845;PF00728)' T '29.7.8' 'protein.glycosylation.alpha-1,6-mannosyl-glycoprotein-beta-1,2-N-acetylglucosaminyltransferase(GnTII)' 'nbv0.5scaffold1022_263182-275846' '(at3g55260 : 784.0) Encodes a protein with β-hexosaminidase activity (the enzyme is active with p-nitrophenyl-β-N-acetylglucosaminide as substrate but displayed only a minor activity toward p-nitrophenyl-β-N-acetylgalactosaminide). The enzyme displays no distinct preference for a specific terminal GlcNAc residue and indeed cleaved the asialoagalactodabsylglycopeptide GnGn to a mixture of products.; beta-hexosaminidase 1 (HEXO1); FUNCTIONS IN: hexosaminidase activity, beta-N-acetylhexosaminidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 20, catalytic core (InterPro:IPR015883), Beta-N-acetylhexosaminidase, subunit a/b (InterPro:IPR015882), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 20 (InterPro:IPR001540), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-hexosaminidase 3 (TAIR:AT1G65590.1); Has 3779 Blast hits to 3705 proteins in 735 species: Archae - 2; Bacteria - 2420; Metazoa - 475; Fungi - 222; Plants - 128; Viruses - 0; Other Eukaryotes - 532 (source: NCBI BLink). & (gnl|cdd|37710 : 518.0) no description available & (gnl|cdd|84986 : 270.0) no description available & (reliability: 1568.0) & (original description: Putative HEXO1, Description = Beta-hexosaminidase 1, PFAM = PF00728;PF14845)' T '29.7.8' 'protein.glycosylation.alpha-1,6-mannosyl-glycoprotein-beta-1,2-N-acetylglucosaminyltransferase(GnTII)' 'niben044scf00003864ctg021_2076-11648' '(at1g65590 : 770.0) Encodes a protein with beta-hexosaminidase activity. Located on the plasma membrane.; beta-hexosaminidase 3 (HEXO3); FUNCTIONS IN: hexosaminidase activity, beta-N-acetylhexosaminidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plasma membrane, plant-type cell wall; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 20, catalytic core (InterPro:IPR015883), Beta-N-acetylhexosaminidase, subunit a/b (InterPro:IPR015882), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 20 (InterPro:IPR001540), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-hexosaminidase 1 (TAIR:AT3G55260.1); Has 3849 Blast hits to 3760 proteins in 723 species: Archae - 6; Bacteria - 2490; Metazoa - 475; Fungi - 225; Plants - 125; Viruses - 0; Other Eukaryotes - 528 (source: NCBI BLink). & (gnl|cdd|37710 : 454.0) no description available & (gnl|cdd|84986 : 309.0) no description available & (reliability: 1540.0) & (original description: Putative 18960, Description = Predicted protein, PFAM = PF14845;PF00728)' T '29.7.8' 'protein.glycosylation.alpha-1,6-mannosyl-glycoprotein-beta-1,2-N-acetylglucosaminyltransferase(GnTII)' 'niben101scf02405_194500-201529' '(at1g65590 : 769.0) Encodes a protein with beta-hexosaminidase activity. Located on the plasma membrane.; beta-hexosaminidase 3 (HEXO3); FUNCTIONS IN: hexosaminidase activity, beta-N-acetylhexosaminidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plasma membrane, plant-type cell wall; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 20, catalytic core (InterPro:IPR015883), Beta-N-acetylhexosaminidase, subunit a/b (InterPro:IPR015882), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 20 (InterPro:IPR001540), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-hexosaminidase 1 (TAIR:AT3G55260.1); Has 3849 Blast hits to 3760 proteins in 723 species: Archae - 6; Bacteria - 2490; Metazoa - 475; Fungi - 225; Plants - 125; Viruses - 0; Other Eukaryotes - 528 (source: NCBI BLink). & (gnl|cdd|37710 : 455.0) no description available & (gnl|cdd|84986 : 304.0) no description available & (reliability: 1538.0) & (original description: Putative HEXO3, Description = Beta-hexosaminidase 3, PFAM = PF00728;PF14845)' T '29.7.8' 'protein.glycosylation.alpha-1,6-mannosyl-glycoprotein-beta-1,2-N-acetylglucosaminyltransferase(GnTII)' 'niben101scf03794_129894-143607' '(at3g55260 : 799.0) Encodes a protein with β-hexosaminidase activity (the enzyme is active with p-nitrophenyl-β-N-acetylglucosaminide as substrate but displayed only a minor activity toward p-nitrophenyl-β-N-acetylgalactosaminide). The enzyme displays no distinct preference for a specific terminal GlcNAc residue and indeed cleaved the asialoagalactodabsylglycopeptide GnGn to a mixture of products.; beta-hexosaminidase 1 (HEXO1); FUNCTIONS IN: hexosaminidase activity, beta-N-acetylhexosaminidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 20, catalytic core (InterPro:IPR015883), Beta-N-acetylhexosaminidase, subunit a/b (InterPro:IPR015882), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 20 (InterPro:IPR001540), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-hexosaminidase 3 (TAIR:AT1G65590.1); Has 3779 Blast hits to 3705 proteins in 735 species: Archae - 2; Bacteria - 2420; Metazoa - 475; Fungi - 222; Plants - 128; Viruses - 0; Other Eukaryotes - 532 (source: NCBI BLink). & (gnl|cdd|37710 : 519.0) no description available & (gnl|cdd|84986 : 268.0) no description available & (reliability: 1598.0) & (original description: Putative Os05g0415700, Description = Beta-hexosaminidase, PFAM = PF00728;PF14845)' T '29.7.8' 'protein.glycosylation.alpha-1,6-mannosyl-glycoprotein-beta-1,2-N-acetylglucosaminyltransferase(GnTII)' 'niben101scf16329_34380-37666' '(at2g05320 : 599.0) beta-1,2-N-acetylglucosaminyltransferase II; FUNCTIONS IN: acetylglucosaminyltransferase activity, alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity; INVOLVED IN: oligosaccharide biosynthetic process; LOCATED IN: Golgi stack, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: N-acetylglucosaminyltransferase II (InterPro:IPR007754); Has 211 Blast hits to 180 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 183; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|38002 : 461.0) no description available & (gnl|cdd|68628 : 437.0) no description available & (reliability: 1198.0) & (original description: Putative gnt1, Description = Beta 1,2 N-acetylglucosaminyltransferase, PFAM = PF05060)' T '29.7.9' 'protein.glycosylation.beta-1,2-xylosyltransferase(beta-1,2-XylT)' 'niben044scf00021765ctg009_302-5786' '(at5g55500 : 661.0) Encodes a beta-1,2-xylosyltransferase that is glycosylated at two positions.; "beta-1,2-xylosyltransferase" (XYLT); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39896 : 229.0) no description available & (reliability: 1322.0) & (original description: Putative xylt, Description = Putative beta-(1,2)-xylosyltransferase, PFAM = PF04577)' T '29.7.9' 'protein.glycosylation.beta-1,2-xylosyltransferase(beta-1,2-XylT)' 'niben101scf04205_351539-356961' '(at5g55500 : 665.0) Encodes a beta-1,2-xylosyltransferase that is glycosylated at two positions.; "beta-1,2-xylosyltransferase" (XYLT); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39896 : 230.0) no description available & (reliability: 1330.0) & (original description: Putative xylt, Description = Putative beta-(1,2)-xylosyltransferase, PFAM = PF04577)' T '29.7.9' 'protein.glycosylation.beta-1,2-xylosyltransferase(beta-1,2-XylT)' 'niben101scf04551_242972-248790' '(at5g55500 : 645.0) Encodes a beta-1,2-xylosyltransferase that is glycosylated at two positions.; "beta-1,2-xylosyltransferase" (XYLT); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39896 : 224.0) no description available & (reliability: 1290.0) & (original description: Putative xylt, Description = Putative beta-(1,2)-xylosyltransferase, PFAM = PF04577)' T '29.7.10' 'protein.glycosylation.alpha-1,3-fucosyltransferase(alpha-1,3-FucT)' 'nbv0.3scaffold17106_22918-37136' '(at1g49710 : 657.0) Encodes a protein with core α1,3-fucosyltransferase activity.; fucosyltransferase 12 (FUT12); FUNCTIONS IN: transferase activity, transferring glycosyl groups, fucosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: Golgi apparatus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 10 (InterPro:IPR001503); BEST Arabidopsis thaliana protein match is: fucosyltransferase 11 (TAIR:AT3G19280.1); Has 1527 Blast hits to 1523 proteins in 197 species: Archae - 4; Bacteria - 161; Metazoa - 1008; Fungi - 0; Plants - 130; Viruses - 3; Other Eukaryotes - 221 (source: NCBI BLink). & (gnl|cdd|37830 : 239.0) no description available & (gnl|cdd|85069 : 104.0) no description available & (reliability: 1314.0) & (original description: Putative FUT12, Description = Putative fucosyltransferase-like protein, PFAM = PF00852)' T '29.7.10' 'protein.glycosylation.alpha-1,3-fucosyltransferase(alpha-1,3-FucT)' 'niben101scf01272_1-8001' '(at3g19280 : 652.0) Encodes a protein with core α1,3-fucosyltransferase activity.; fucosyltransferase 11 (FUT11); FUNCTIONS IN: 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity, transferase activity, transferring glycosyl groups, fucosyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 10 (InterPro:IPR001503); BEST Arabidopsis thaliana protein match is: fucosyltransferase 12 (TAIR:AT1G49710.1); Has 1598 Blast hits to 1593 proteins in 204 species: Archae - 4; Bacteria - 180; Metazoa - 1025; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 257 (source: NCBI BLink). & (gnl|cdd|37830 : 236.0) no description available & (gnl|cdd|85069 : 109.0) no description available & (reliability: 1304.0) & (original description: Putative FUT12, Description = Putative fucosyltransferase-like protein, PFAM = PF00852)' T '29.7.10' 'protein.glycosylation.alpha-1,3-fucosyltransferase(alpha-1,3-FucT)' 'niben101scf05447_448929-452523' '(at3g19280 : 650.0) Encodes a protein with core α1,3-fucosyltransferase activity.; fucosyltransferase 11 (FUT11); FUNCTIONS IN: 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity, transferase activity, transferring glycosyl groups, fucosyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 10 (InterPro:IPR001503); BEST Arabidopsis thaliana protein match is: fucosyltransferase 12 (TAIR:AT1G49710.1); Has 1598 Blast hits to 1593 proteins in 204 species: Archae - 4; Bacteria - 180; Metazoa - 1025; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 257 (source: NCBI BLink). & (gnl|cdd|37830 : 239.0) no description available & (gnl|cdd|85069 : 100.0) no description available & (reliability: 1300.0) & (original description: Putative FUT12, Description = Putative fucosyltransferase-like protein, PFAM = PF00852)' T '29.7.10' 'protein.glycosylation.alpha-1,3-fucosyltransferase(alpha-1,3-FucT)' 'niben101scf05494_207615-215559' '(at3g19280 : 662.0) Encodes a protein with core α1,3-fucosyltransferase activity.; fucosyltransferase 11 (FUT11); FUNCTIONS IN: 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity, transferase activity, transferring glycosyl groups, fucosyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 10 (InterPro:IPR001503); BEST Arabidopsis thaliana protein match is: fucosyltransferase 12 (TAIR:AT1G49710.1); Has 1598 Blast hits to 1593 proteins in 204 species: Archae - 4; Bacteria - 180; Metazoa - 1025; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 257 (source: NCBI BLink). & (gnl|cdd|37830 : 246.0) no description available & (gnl|cdd|85069 : 105.0) no description available & (reliability: 1324.0) & (original description: Putative fuct, Description = Alpha 1,3-fucosyltransferase, PFAM = PF00852)' T '29.7.11' 'protein.glycosylation.alpha-N-acetylglucosaminidase' '' '' '29.7.12' 'protein.glycosylation.beta-1,3-galactosyltransferase(beta-1,3-GalT)' 'niben044scf00030448ctg006_6034-11616' '(at1g26810 : 826.0) Encodes a protein with β1,3-galactosyltransferase activity involved in the biosynthesis of the Lewis a epitope of certain glycoproteins.; galactosyltransferase1 (GALT1); CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT3G06440.1); Has 2303 Blast hits to 2268 proteins in 112 species: Archae - 0; Bacteria - 4; Metazoa - 1677; Fungi - 5; Plants - 568; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|37498 : 274.0) no description available & (gnl|cdd|85659 : 118.0) no description available & (reliability: 1652.0) & (original description: Putative GALT1, Description = Beta-1,3-galactosyltransferase GALT1, PFAM = PF01762;PF00337)' T '29.7.12' 'protein.glycosylation.beta-1,3-galactosyltransferase(beta-1,3-GalT)' 'niben101scf09597_21103-26435' '(at1g26810 : 764.0) Encodes a protein with β1,3-galactosyltransferase activity involved in the biosynthesis of the Lewis a epitope of certain glycoproteins.; galactosyltransferase1 (GALT1); CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT3G06440.1); Has 2303 Blast hits to 2268 proteins in 112 species: Archae - 0; Bacteria - 4; Metazoa - 1677; Fungi - 5; Plants - 568; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|37498 : 232.0) no description available & (gnl|cdd|84703 : 93.0) no description available & (reliability: 1528.0) & (original description: Putative GALT1, Description = Beta-1,3-galactosyltransferase GALT1, PFAM = PF00337;PF01762;PF01762)' T '29.7.13' 'protein.glycosylation.alpha-1,4-fucosyltransferase(alpha-1,4-FucT)' 'niben044scf00003886ctg025_1-6274' '(at1g71990 : 603.0) This gene encodes a Lewis-type alpha 1,4-fucosyltransferase; fucosyltransferase 13 (FUT13); FUNCTIONS IN: transferase activity, transferring glycosyl groups, fucosyltransferase activity; INVOLVED IN: Lewis a epitope biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 10 (InterPro:IPR001503), Alpha-(1, 3)-fucosyltransferase/alpha-(1, 4)-fucosyltransferase, plant (InterPro:IPR017177); BEST Arabidopsis thaliana protein match is: fucosyltransferase 11 (TAIR:AT3G19280.1); Has 1516 Blast hits to 1512 proteins in 188 species: Archae - 4; Bacteria - 145; Metazoa - 1010; Fungi - 0; Plants - 129; Viruses - 3; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|37830 : 240.0) no description available & (gnl|cdd|85069 : 88.9) no description available & (reliability: 1206.0) & (original description: Putative FUT13, Description = Alpha-(1,4)-fucosyltransferase, PFAM = PF00852)' T '29.7.13' 'protein.glycosylation.alpha-1,4-fucosyltransferase(alpha-1,4-FucT)' 'niben044scf00019342ctg012_3601-9239' '(at1g71990 : 594.0) This gene encodes a Lewis-type alpha 1,4-fucosyltransferase; fucosyltransferase 13 (FUT13); FUNCTIONS IN: transferase activity, transferring glycosyl groups, fucosyltransferase activity; INVOLVED IN: Lewis a epitope biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 10 (InterPro:IPR001503), Alpha-(1, 3)-fucosyltransferase/alpha-(1, 4)-fucosyltransferase, plant (InterPro:IPR017177); BEST Arabidopsis thaliana protein match is: fucosyltransferase 11 (TAIR:AT3G19280.1); Has 1516 Blast hits to 1512 proteins in 188 species: Archae - 4; Bacteria - 145; Metazoa - 1010; Fungi - 0; Plants - 129; Viruses - 3; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|37830 : 232.0) no description available & (gnl|cdd|85069 : 90.5) no description available & (reliability: 1188.0) & (original description: Putative fucT, Description = GDP-Fuc:Gal-beta-1,3GlcNAc-R alpha1,4-fucosyltransferase, PFAM = PF00852)' T '29.7.13' 'protein.glycosylation.alpha-1,4-fucosyltransferase(alpha-1,4-FucT)' 'niben101scf02272_26738-32376' '(at1g71990 : 598.0) This gene encodes a Lewis-type alpha 1,4-fucosyltransferase; fucosyltransferase 13 (FUT13); FUNCTIONS IN: transferase activity, transferring glycosyl groups, fucosyltransferase activity; INVOLVED IN: Lewis a epitope biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 10 (InterPro:IPR001503), Alpha-(1, 3)-fucosyltransferase/alpha-(1, 4)-fucosyltransferase, plant (InterPro:IPR017177); BEST Arabidopsis thaliana protein match is: fucosyltransferase 11 (TAIR:AT3G19280.1); Has 1516 Blast hits to 1512 proteins in 188 species: Archae - 4; Bacteria - 145; Metazoa - 1010; Fungi - 0; Plants - 129; Viruses - 3; Other Eukaryotes - 225 (source: NCBI BLink). & (gnl|cdd|37830 : 231.0) no description available & (gnl|cdd|85069 : 90.1) no description available & (reliability: 1196.0) & (original description: Putative fucT, Description = GDP-Fuc:Gal-beta-1,3GlcNAc-R alpha1,4-fucosyltransferase, PFAM = PF00852)' T '29.8' 'protein.assembly and cofactor ligation' 'nbv0.3scaffold10807_44829-47192' '(p12222|ycf1_tobac : 240.0) Putative membrane protein ycf1 (ORF 1901) - Nicotiana tabacum (Common tobacco) & (atcg01130 : 224.0) hypothetical protein; YCF1.2; FUNCTIONS IN: protein binding; LOCATED IN: chloroplast, membrane; EXPRESSED IN: cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Ycf1 (InterPro:IPR008896); BEST Arabidopsis thaliana protein match is: Ycf1 protein (TAIR:ATCG01000.1). & (gnl|cdd|86942 : 179.0) no description available & (reliability: 448.0) & (original description: Putative ycf1, Description = Hypothetical chloroplast RF1, PFAM = PF05758)' T '29.8' 'protein.assembly and cofactor ligation' 'nbv0.3scaffold12143_40860-45001' '(at5g49940 : 253.0) Encodes a protein containing the NFU domain and functions as a molecular scaffold for iron-sulfur cluster assembly and delivery. Homologous to the cyanobacterial CNFU protein and is targeted to the chloroplast.; NIFU-like protein 2 (NFU2); FUNCTIONS IN: structural molecule activity; INVOLVED IN: chloroplast organization, iron-sulfur cluster assembly; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NIF system FeS cluster assembly, NifU, C-terminal (InterPro:IPR001075); BEST Arabidopsis thaliana protein match is: NFU domain protein 3 (TAIR:AT4G25910.1); Has 5633 Blast hits to 5549 proteins in 1523 species: Archae - 23; Bacteria - 2985; Metazoa - 160; Fungi - 151; Plants - 263; Viruses - 3; Other Eukaryotes - 2048 (source: NCBI BLink). & (q84lk7|nifu1_orysa : 212.0) NifU-like protein 1, chloroplast precursor (OsNifu1) - Oryza sativa (Rice) & (gnl|cdd|37569 : 156.0) no description available & (gnl|cdd|64941 : 91.4) no description available & (reliability: 506.0) & (original description: Putative NIFU1, Description = Iron-sulfur cluster assembly protein, PFAM = PF01106;PF01106)' T '29.8' 'protein.assembly and cofactor ligation' 'nbv0.3scaffold19809_1-6456' '(at1g59840 : 357.0) cofactor assembly of complex C (CCB4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome b6f complex assembly; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2930 (InterPro:IPR021325); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 714.0) & (original description: Putative CCB4, Description = Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic, PFAM = PF11152)' T '29.8' 'protein.assembly and cofactor ligation' 'nbv0.3scaffold29295_18139-22773' '(at1g64810 : 536.0) chloroplast APO1; ACCUMULATION OF PHOTOSYSTEM ONE 1 (APO1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF794, plant (InterPro:IPR008512); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF794) (TAIR:AT5G57930.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69172 : 480.0) no description available & (reliability: 1072.0) & (original description: Putative APO1, Description = APO protein 1, chloroplastic, PFAM = PF05634;PF05634)' T '29.8' 'protein.assembly and cofactor ligation' 'nbv0.3scaffold41426_3251-11443' '(at5g54290 : 201.0) Encodes CcdA, a thylakoid membrane protein required for the transfer of reducing equivalents from stroma to thylakoid lumen.; CcdA; CONTAINS InterPro DOMAIN/s: Cytochrome c assembly protein, transmembrane domain (InterPro:IPR003834). & (reliability: 402.0) & (original description: Putative ccdA, Description = Cytochrome c biogenesis protein transmembrane region, PFAM = PF02683)' T '29.8' 'protein.assembly and cofactor ligation' 'nbv0.3scaffold50129_10123-15131' '(at5g23120 : 212.0) encodes a stability and/or assembly factor of photosystem II; HIGH CHLOROPHYLL FLUORESCENCE 136 (HCF136); INVOLVED IN: response to cadmium ion, plastid organization, protein complex assembly; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BNR repeat (InterPro:IPR002860), Photosystem II stability/assembly factor, HCF136 (InterPro:IPR016705), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5z5a8|p2saf_orysa : 209.0) Photosystem II stability/assembly factor HCF136, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|34127 : 95.1) no description available & (reliability: 424.0) & (original description: Putative ycf48, Description = Ycf48-like protein, PFAM = PF14870)' T '29.8' 'protein.assembly and cofactor ligation' 'nbv0.3scaffold61872_1-6220' '(at5g23120 : 413.0) encodes a stability and/or assembly factor of photosystem II; HIGH CHLOROPHYLL FLUORESCENCE 136 (HCF136); INVOLVED IN: response to cadmium ion, plastid organization, protein complex assembly; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BNR repeat (InterPro:IPR002860), Photosystem II stability/assembly factor, HCF136 (InterPro:IPR016705), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5z5a8|p2saf_orysa : 409.0) Photosystem II stability/assembly factor HCF136, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|34127 : 167.0) no description available & (gnl|cdd|38720 : 166.0) no description available & (reliability: 826.0) & (original description: Putative hcf, Description = Ycf48-like protein, PFAM = PF14870)' T '29.8' 'protein.assembly and cofactor ligation' 'nbv0.5scaffold20_1584979-1590926' '(gnl|cdd|38571 : 244.0) no description available & (at4g22220 : 235.0) Encodes a mitochondrial protein similar to E.coli IscU. In bacteria, IscU is a scaffold protein accepting sulfur and iron to build a transient Fe-S cluster,which is subsequently transferred to a target apoprotein.; ISU1; CONTAINS InterPro DOMAIN/s: NIF system FeS cluster assembly, NifU, N-terminal (InterPro:IPR002871), ISC system FeS cluster assembly, IscU scaffold (InterPro:IPR011339); BEST Arabidopsis thaliana protein match is: ISCU-like 3 (TAIR:AT4G04080.1); Has 5453 Blast hits to 5453 proteins in 1998 species: Archae - 110; Bacteria - 3654; Metazoa - 148; Fungi - 154; Plants - 89; Viruses - 0; Other Eukaryotes - 1298 (source: NCBI BLink). & (gnl|cdd|83830 : 222.0) no description available & (reliability: 470.0) & (original description: Putative ISU1, Description = Iron-sulfur cluster assembly protein 1, PFAM = PF01592)' T '29.8' 'protein.assembly and cofactor ligation' 'nbv0.5scaffold6460_41415-56585' '(at3g10670 : 124.0) Plastidic SufC-like ATP-binding cassette/ATPase essential for Arabidopsis embryogenesis. Involved in the biogenesis and/or repair of oxidatively damaged FeñS clusters. Expressed in embryos and meristems.; non-intrinsic ABC protein 7 (NAP7); FUNCTIONS IN: protein binding, ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: iron-sulfur cluster assembly, thylakoid membrane organization, embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase SufC, SUF system FeS cluster assembly (InterPro:IPR010230), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT4G33460.1); Has 256475 Blast hits to 243565 proteins in 3618 species: Archae - 5159; Bacteria - 209774; Metazoa - 3736; Fungi - 3348; Plants - 2780; Viruses - 4; Other Eukaryotes - 31674 (source: NCBI BLink). & (gnl|cdd|79343 : 109.0) no description available & (reliability: 248.0) & (original description: Putative sufC, Description = FeS assembly ATPase SufC, PFAM = PF00005)' T '29.8' 'protein.assembly and cofactor ligation' 'nbv0.5scaffold7813_50511-53964' '(p12204|ycf3_tobac : 330.0) Photosystem I assembly protein ycf3 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79251 : 309.0) no description available & (atcg00360 : 235.0) Encodes a protein required for photosystem I assembly and stability. In Chlamydomonas reinhardtii, this protein seems to act as a PSI specific chaperone facilitating the assembly of the complex by interacting with PsaA and PsaD. A loss of function mutation in tobacco leads to a loss of photosystem I.; YCF3; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1). & (reliability: 470.0) & (original description: Putative ycf3, Description = Photosystem I assembly protein Ycf3, PFAM = PF00515)' T '29.8' 'protein.assembly and cofactor ligation' 'nbv0.5scaffold8786_29571-32557' '(gnl|cdd|79244 : 684.0) no description available & (p09976|ycf2_tobac : 583.0) Protein ycf2 - Nicotiana tabacum (Common tobacco) & (atcg01280 : 547.0) hypothetical protein; YCF2.2; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Chloroplast Ycf2 (InterPro:IPR008543); BEST Arabidopsis thaliana protein match is: Chloroplast Ycf2;ATPase, AAA type, core (TAIR:ATCG00860.1). & (reliability: 1094.0) & (original description: Putative ycf2, Description = Probable ATPase, PFAM = PF00004)' T '29.8' 'protein.assembly and cofactor ligation' 'niben044scf00001379ctg000_3018-8678' '(at3g10670 : 418.0) Plastidic SufC-like ATP-binding cassette/ATPase essential for Arabidopsis embryogenesis. Involved in the biogenesis and/or repair of oxidatively damaged FeñS clusters. Expressed in embryos and meristems.; non-intrinsic ABC protein 7 (NAP7); FUNCTIONS IN: protein binding, ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: iron-sulfur cluster assembly, thylakoid membrane organization, embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase SufC, SUF system FeS cluster assembly (InterPro:IPR010230), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT4G33460.1); Has 256475 Blast hits to 243565 proteins in 3618 species: Archae - 5159; Bacteria - 209774; Metazoa - 3736; Fungi - 3348; Plants - 2780; Viruses - 4; Other Eukaryotes - 31674 (source: NCBI BLink). & (gnl|cdd|79343 : 344.0) no description available & (gnl|cdd|35278 : 88.0) no description available & (reliability: 836.0) & (original description: Putative sufC, Description = Iron-sulfur cluster assembly protein, PFAM = PF00005)' T '29.8' 'protein.assembly and cofactor ligation' 'niben044scf00002556ctg008_18354-21361' '(gnl|cdd|38571 : 186.0) no description available & (at4g22220 : 177.0) Encodes a mitochondrial protein similar to E.coli IscU. In bacteria, IscU is a scaffold protein accepting sulfur and iron to build a transient Fe-S cluster,which is subsequently transferred to a target apoprotein.; ISU1; CONTAINS InterPro DOMAIN/s: NIF system FeS cluster assembly, NifU, N-terminal (InterPro:IPR002871), ISC system FeS cluster assembly, IscU scaffold (InterPro:IPR011339); BEST Arabidopsis thaliana protein match is: ISCU-like 3 (TAIR:AT4G04080.1); Has 5453 Blast hits to 5453 proteins in 1998 species: Archae - 110; Bacteria - 3654; Metazoa - 148; Fungi - 154; Plants - 89; Viruses - 0; Other Eukaryotes - 1298 (source: NCBI BLink). & (gnl|cdd|83830 : 171.0) no description available & (reliability: 354.0) & (original description: Putative ISCU, Description = ISCU, PFAM = PF01592)' T '29.8' 'protein.assembly and cofactor ligation' 'niben044scf00003423ctg016_802-5314' '(at1g64810 : 525.0) chloroplast APO1; ACCUMULATION OF PHOTOSYSTEM ONE 1 (APO1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF794, plant (InterPro:IPR008512); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF794) (TAIR:AT5G57930.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69172 : 474.0) no description available & (reliability: 1050.0) & (original description: Putative APO1, Description = APO protein 1, chloroplastic, PFAM = PF05634;PF05634)' T '29.8' 'protein.assembly and cofactor ligation' 'niben044scf00016145ctg007_6483-11457' '(at4g37200 : 283.0) Encodes thioredoxin-like protein with disulfide reductase activity that is involved in the biogenesis of the plastid cytochrome b6f complex. Protein is located in the thylakoid membrane with the C-terminal hydrophilic portion, containing the thioredoxin like domain, extending into the thylakoid lumen.; HIGH CHLOROPHYLL FLUORESCENCE 164 (HCF164); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cytochrome b6f complex assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast thylakoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin X (TAIR:AT1G50320.1); Has 12708 Blast hits to 12383 proteins in 2440 species: Archae - 136; Bacteria - 7708; Metazoa - 1002; Fungi - 428; Plants - 950; Viruses - 3; Other Eukaryotes - 2481 (source: NCBI BLink). & (gnl|cdd|48499 : 212.0) no description available & (reliability: 566.0) & (original description: Putative HCF164, Description = Thioredoxin-like protein HCF164, chloroplastic, PFAM = PF00085)' T '29.8' 'protein.assembly and cofactor ligation' 'niben044scf00024071ctg005_1-7637' '(at1g59840 : 358.0) cofactor assembly of complex C (CCB4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome b6f complex assembly; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2930 (InterPro:IPR021325); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 716.0) & (original description: Putative CCB4, Description = Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic, PFAM = PF11152)' T '29.8' 'protein.assembly and cofactor ligation' 'niben044scf00031456ctg004_1-4574' '(at3g10670 : 150.0) Plastidic SufC-like ATP-binding cassette/ATPase essential for Arabidopsis embryogenesis. Involved in the biogenesis and/or repair of oxidatively damaged FeñS clusters. Expressed in embryos and meristems.; non-intrinsic ABC protein 7 (NAP7); FUNCTIONS IN: protein binding, ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: iron-sulfur cluster assembly, thylakoid membrane organization, embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase SufC, SUF system FeS cluster assembly (InterPro:IPR010230), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT4G33460.1); Has 256475 Blast hits to 243565 proteins in 3618 species: Archae - 5159; Bacteria - 209774; Metazoa - 3736; Fungi - 3348; Plants - 2780; Viruses - 4; Other Eukaryotes - 31674 (source: NCBI BLink). & (gnl|cdd|79343 : 113.0) no description available & (reliability: 300.0) & (original description: Putative sufC, Description = FeS assembly ATPase SufC, PFAM = )' T '29.8' 'protein.assembly and cofactor ligation' 'niben044scf00044787ctg001_5196-13828' '(at5g23120 : 559.0) encodes a stability and/or assembly factor of photosystem II; HIGH CHLOROPHYLL FLUORESCENCE 136 (HCF136); INVOLVED IN: response to cadmium ion, plastid organization, protein complex assembly; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BNR repeat (InterPro:IPR002860), Photosystem II stability/assembly factor, HCF136 (InterPro:IPR016705), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5z5a8|p2saf_orysa : 551.0) Photosystem II stability/assembly factor HCF136, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|38720 : 231.0) no description available & (gnl|cdd|34127 : 228.0) no description available & (reliability: 1118.0) & (original description: Putative HCF136, Description = Photosystem II stability/assembly factor HCF136, chloroplastic, PFAM = PF14870)' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf00051_93722-98548' '(at4g04770 : 870.0) Encodes an iron-stimulated ATPase. A member of the NAP subfamily of ABC transporters. Involved in Fe-S cluster assembly. Similar to SufB. Involved in the regulation of iron homeostasis. Able to form homodimers. Interacts with AtNAP7 inside the chloroplast.; ATP binding cassette protein 1 (ABC1); FUNCTIONS IN: protein binding, ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: cellular iron ion homeostasis, regulation of response to red or far red light, iron-sulfur cluster assembly; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SUF system FeS cluster assembly, SufB (InterPro:IPR010231), SUF system FeS cluster assembly, SufBD (InterPro:IPR000825); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD superfamily protein (TAIR:AT5G44316.1); Has 12037 Blast hits to 11965 proteins in 1962 species: Archae - 330; Bacteria - 6550; Metazoa - 4; Fungi - 1; Plants - 99; Viruses - 0; Other Eukaryotes - 5053 (source: NCBI BLink). & (gnl|cdd|83989 : 869.0) no description available & (reliability: 1740.0) & (original description: Putative ABCI8, Description = UPF0051 protein ABCI8, chloroplastic, PFAM = PF01458)' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf00083_189133-193997' '(at4g04770 : 863.0) Encodes an iron-stimulated ATPase. A member of the NAP subfamily of ABC transporters. Involved in Fe-S cluster assembly. Similar to SufB. Involved in the regulation of iron homeostasis. Able to form homodimers. Interacts with AtNAP7 inside the chloroplast.; ATP binding cassette protein 1 (ABC1); FUNCTIONS IN: protein binding, ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: cellular iron ion homeostasis, regulation of response to red or far red light, iron-sulfur cluster assembly; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SUF system FeS cluster assembly, SufB (InterPro:IPR010231), SUF system FeS cluster assembly, SufBD (InterPro:IPR000825); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD superfamily protein (TAIR:AT5G44316.1); Has 12037 Blast hits to 11965 proteins in 1962 species: Archae - 330; Bacteria - 6550; Metazoa - 4; Fungi - 1; Plants - 99; Viruses - 0; Other Eukaryotes - 5053 (source: NCBI BLink). & (gnl|cdd|83989 : 863.0) no description available & (reliability: 1726.0) & (original description: Putative sufB, Description = FeS assembly protein SufB, PFAM = PF01458)' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf00173_73367-82488' '(at3g20970 : 341.0) Encodes a protein containing the NFU domain that may be involved in iron-sulfur cluster assembly. Part of a five member gene family, more closely related to NFU5 than to NFU1,2, and 3. Targeted to the mitochondrion.; NFU domain protein 4 (NFU4); CONTAINS InterPro DOMAIN/s: NIF system FeS cluster assembly, NifU, C-terminal (InterPro:IPR001075), HIRA-interacting protein 5 (InterPro:IPR017065), NIF system FeS cluster assembly, NifU-like scaffold, N-terminal (InterPro:IPR014824); BEST Arabidopsis thaliana protein match is: NFU domain protein 5 (TAIR:AT1G51390.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37569 : 228.0) no description available & (gnl|cdd|87610 : 141.0) no description available & (reliability: 682.0) & (original description: Putative NIFU5, Description = NifU-like protein 5, mitochondrial, PFAM = PF01106;PF08712)' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf00558_67748-71522' '(p12204|ycf3_tobac : 308.0) Photosystem I assembly protein ycf3 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79251 : 287.0) no description available & (atcg00360 : 216.0) Encodes a protein required for photosystem I assembly and stability. In Chlamydomonas reinhardtii, this protein seems to act as a PSI specific chaperone facilitating the assembly of the complex by interacting with PsaA and PsaD. A loss of function mutation in tobacco leads to a loss of photosystem I.; YCF3; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1). & (reliability: 432.0) & (original description: Putative ycf3, Description = Photosystem I assembly protein Ycf3, PFAM = PF00515)' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf01063_962702-968454' '(at5g17170 : 286.0) enhancer of sos3-1 (ENH1); FUNCTIONS IN: metal ion binding; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: protein containing PDZ domain, a K-box domain, and a TPR region (TAIR:AT1G55480.1); Has 199 Blast hits to 197 proteins in 82 species: Archae - 0; Bacteria - 101; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 572.0) & (original description: Putative ENH1, Description = Putative uncharacterized protein At5g17170, PFAM = )' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf01577_151098-159695' '(at1g59840 : 360.0) cofactor assembly of complex C (CCB4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome b6f complex assembly; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2930 (InterPro:IPR021325); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 720.0) & (original description: Putative CCB4, Description = Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic, PFAM = PF11152)' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf01767_395702-404463' '(at3g20970 : 338.0) Encodes a protein containing the NFU domain that may be involved in iron-sulfur cluster assembly. Part of a five member gene family, more closely related to NFU5 than to NFU1,2, and 3. Targeted to the mitochondrion.; NFU domain protein 4 (NFU4); CONTAINS InterPro DOMAIN/s: NIF system FeS cluster assembly, NifU, C-terminal (InterPro:IPR001075), HIRA-interacting protein 5 (InterPro:IPR017065), NIF system FeS cluster assembly, NifU-like scaffold, N-terminal (InterPro:IPR014824); BEST Arabidopsis thaliana protein match is: NFU domain protein 5 (TAIR:AT1G51390.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37569 : 232.0) no description available & (gnl|cdd|87610 : 144.0) no description available & (reliability: 676.0) & (original description: Putative Nfu1, Description = NFU1 iron-sulfur cluster scaffold homolog, mitochondrial, PFAM = PF01106;PF08712)' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf01970_94141-110431' '(at5g49940 : 248.0) Encodes a protein containing the NFU domain and functions as a molecular scaffold for iron-sulfur cluster assembly and delivery. Homologous to the cyanobacterial CNFU protein and is targeted to the chloroplast.; NIFU-like protein 2 (NFU2); FUNCTIONS IN: structural molecule activity; INVOLVED IN: chloroplast organization, iron-sulfur cluster assembly; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NIF system FeS cluster assembly, NifU, C-terminal (InterPro:IPR001075); BEST Arabidopsis thaliana protein match is: NFU domain protein 3 (TAIR:AT4G25910.1); Has 5633 Blast hits to 5549 proteins in 1523 species: Archae - 23; Bacteria - 2985; Metazoa - 160; Fungi - 151; Plants - 263; Viruses - 3; Other Eukaryotes - 2048 (source: NCBI BLink). & (q84lk7|nifu1_orysa : 211.0) NifU-like protein 1, chloroplast precursor (OsNifu1) - Oryza sativa (Rice) & (gnl|cdd|37569 : 161.0) no description available & (gnl|cdd|64941 : 91.4) no description available & (reliability: 496.0) & (original description: Putative NIFU1, Description = Iron-sulfur cluster assembly protein, PFAM = PF01106;PF01106)' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf02601_526658-769873' '(gnl|cdd|79244 : 561.0) no description available & (p09976|ycf2_tobac : 464.0) Protein ycf2 - Nicotiana tabacum (Common tobacco) & (atcg01280 : 436.0) hypothetical protein; YCF2.2; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Chloroplast Ycf2 (InterPro:IPR008543); BEST Arabidopsis thaliana protein match is: Chloroplast Ycf2;ATPase, AAA type, core (TAIR:ATCG00860.1). & (reliability: 872.0) & (original description: Putative ycf2, Description = Probable ATPase, PFAM = PF00004)' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf03346_1-1918' '(p12216|ccsa_tobac : 461.0) Cytochrome c biogenesis protein ccsA - Nicotiana tabacum (Common tobacco) & (gnl|cdd|79263 : 458.0) no description available & (atcg01040 : 320.0) hypothetical protein; YCF5; INVOLVED IN: respiratory chain complex IV assembly, protein complex assembly; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c assembly protein (InterPro:IPR002541), Cytochrome c-type biogenesis protein CcsA (InterPro:IPR017562). & (reliability: 640.0) & (original description: Putative ccsA, Description = Cytochrome c biogenesis protein CcsA, PFAM = PF01578)' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf03507_94777-100154' '(at4g04770 : 867.0) Encodes an iron-stimulated ATPase. A member of the NAP subfamily of ABC transporters. Involved in Fe-S cluster assembly. Similar to SufB. Involved in the regulation of iron homeostasis. Able to form homodimers. Interacts with AtNAP7 inside the chloroplast.; ATP binding cassette protein 1 (ABC1); FUNCTIONS IN: protein binding, ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: cellular iron ion homeostasis, regulation of response to red or far red light, iron-sulfur cluster assembly; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SUF system FeS cluster assembly, SufB (InterPro:IPR010231), SUF system FeS cluster assembly, SufBD (InterPro:IPR000825); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD superfamily protein (TAIR:AT5G44316.1); Has 12037 Blast hits to 11965 proteins in 1962 species: Archae - 330; Bacteria - 6550; Metazoa - 4; Fungi - 1; Plants - 99; Viruses - 0; Other Eukaryotes - 5053 (source: NCBI BLink). & (gnl|cdd|83989 : 866.0) no description available & (reliability: 1734.0) & (original description: Putative ABCI8, Description = UPF0051 protein ABCI8, chloroplastic, PFAM = PF01458)' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf03595_451388-460324' '(at5g23120 : 552.0) encodes a stability and/or assembly factor of photosystem II; HIGH CHLOROPHYLL FLUORESCENCE 136 (HCF136); INVOLVED IN: response to cadmium ion, plastid organization, protein complex assembly; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BNR repeat (InterPro:IPR002860), Photosystem II stability/assembly factor, HCF136 (InterPro:IPR016705), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5z5a8|p2saf_orysa : 543.0) Photosystem II stability/assembly factor HCF136, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|34127 : 232.0) no description available & (gnl|cdd|38720 : 230.0) no description available & (reliability: 1104.0) & (original description: Putative HCF136, Description = Photosystem II stability/assembly factor HCF136, chloroplastic, PFAM = PF14870)' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf03939_553042-575511' '(gnl|cdd|38571 : 246.0) no description available & (at4g22220 : 234.0) Encodes a mitochondrial protein similar to E.coli IscU. In bacteria, IscU is a scaffold protein accepting sulfur and iron to build a transient Fe-S cluster,which is subsequently transferred to a target apoprotein.; ISU1; CONTAINS InterPro DOMAIN/s: NIF system FeS cluster assembly, NifU, N-terminal (InterPro:IPR002871), ISC system FeS cluster assembly, IscU scaffold (InterPro:IPR011339); BEST Arabidopsis thaliana protein match is: ISCU-like 3 (TAIR:AT4G04080.1); Has 5453 Blast hits to 5453 proteins in 1998 species: Archae - 110; Bacteria - 3654; Metazoa - 148; Fungi - 154; Plants - 89; Viruses - 0; Other Eukaryotes - 1298 (source: NCBI BLink). & (gnl|cdd|83830 : 221.0) no description available & (reliability: 468.0) & (original description: Putative ISU1, Description = Iron-sulfur cluster assembly protein 1, PFAM = PF01592)' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf04011_801495-805099' '(at4g25910 : 207.0) Encodes a protein containing the NFU domain that may be involved in iron-sulfur cluster assembly. Part of a five member gene family, more closely related to NFU1 and 2 than to NFU4 and 5. Targeted to the chloroplast.; NFU domain protein 3 (NFU3); CONTAINS InterPro DOMAIN/s: NIF system FeS cluster assembly, NifU, C-terminal (InterPro:IPR001075); BEST Arabidopsis thaliana protein match is: NIFU-like protein 2 (TAIR:AT5G49940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37569 : 165.0) no description available & (q84lk7|nifu1_orysa : 142.0) NifU-like protein 1, chloroplast precursor (OsNifu1) - Oryza sativa (Rice) & (gnl|cdd|64941 : 92.9) no description available & (reliability: 414.0) & (original description: Putative NIFU3, Description = NifU-like protein 3, chloroplastic, PFAM = PF01106;PF01106)' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf04504_246057-260930' '(at5g54290 : 206.0) Encodes CcdA, a thylakoid membrane protein required for the transfer of reducing equivalents from stroma to thylakoid lumen.; CcdA; CONTAINS InterPro DOMAIN/s: Cytochrome c assembly protein, transmembrane domain (InterPro:IPR003834). & (reliability: 412.0) & (original description: Putative ccdA, Description = Cytochrome c biogenesis protein transmembrane region, PFAM = PF02683)' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf04504_246062-260362' '(at5g54290 : 354.0) Encodes CcdA, a thylakoid membrane protein required for the transfer of reducing equivalents from stroma to thylakoid lumen.; CcdA; CONTAINS InterPro DOMAIN/s: Cytochrome c assembly protein, transmembrane domain (InterPro:IPR003834). & (gnl|cdd|66377 : 133.0) no description available & (reliability: 708.0) & (original description: Putative CCDA, Description = Cytochrome c-type biogenesis ccda-like chloroplastic protein, PFAM = PF02683)' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf06412_417453-423325' '(at4g01940 : 223.0) Encodes a protein containing the NFU domain that may be involved in iron-sulfur cluster assembly. Part of a five member gene family, more closely related to NFU2 and 3 than to NFU4 and 5. Targeted to the chloroplast.; NFU domain protein 1 (NFU1); CONTAINS InterPro DOMAIN/s: NIF system FeS cluster assembly, NifU, C-terminal (InterPro:IPR001075); BEST Arabidopsis thaliana protein match is: NIFU-like protein 2 (TAIR:AT5G49940.1); Has 4565 Blast hits to 4561 proteins in 1155 species: Archae - 11; Bacteria - 2225; Metazoa - 159; Fungi - 160; Plants - 186; Viruses - 3; Other Eukaryotes - 1821 (source: NCBI BLink). & (gnl|cdd|37569 : 92.0) no description available & (gnl|cdd|64941 : 81.8) no description available & (reliability: 446.0) & (original description: Putative NIFU1, Description = NifU-like protein 1, chloroplastic, PFAM = PF01106;PF01106)' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf06876_190858-192499' '(at1g54500 : 159.0) Rubredoxin-like superfamily protein; FUNCTIONS IN: electron carrier activity, metal ion binding; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubredoxin, iron-binding site (InterPro:IPR018527), Rubredoxin-type Fe(Cys)4 protein (InterPro:IPR004039); Has 3108 Blast hits to 3080 proteins in 1023 species: Archae - 186; Bacteria - 2587; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 283 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative rub, Description = Rubredoxin, PFAM = PF00301)' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf07191_232290-237051' '(at5g23120 : 219.0) encodes a stability and/or assembly factor of photosystem II; HIGH CHLOROPHYLL FLUORESCENCE 136 (HCF136); INVOLVED IN: response to cadmium ion, plastid organization, protein complex assembly; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BNR repeat (InterPro:IPR002860), Photosystem II stability/assembly factor, HCF136 (InterPro:IPR016705), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5z5a8|p2saf_orysa : 216.0) Photosystem II stability/assembly factor HCF136, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|34127 : 96.3) no description available & (gnl|cdd|38720 : 80.4) no description available & (reliability: 438.0) & (original description: Putative ycf48, Description = Ycf48-like protein, PFAM = PF14870)' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf07823_76425-79408' '(p12222|ycf1_tobac : 580.0) Putative membrane protein ycf1 (ORF 1901) - Nicotiana tabacum (Common tobacco) & (atcg01130 : 474.0) hypothetical protein; YCF1.2; FUNCTIONS IN: protein binding; LOCATED IN: chloroplast, membrane; EXPRESSED IN: cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Ycf1 (InterPro:IPR008896); BEST Arabidopsis thaliana protein match is: Ycf1 protein (TAIR:ATCG01000.1). & (gnl|cdd|86942 : 430.0) no description available & (reliability: 948.0) & (original description: Putative ycf1, Description = Ycf1, PFAM = PF05758)' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf08341_664015-672857' '(at3g24430 : 815.0) encodes a MRP-like protein with a nucleotide-binding domain.; HIGH-CHLOROPHYLL-FLUORESCENCE 101 (HCF101); FUNCTIONS IN: ATP binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mrp, conserved site (InterPro:IPR000808), Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376), Protein of unknown function DUF59 (InterPro:IPR002744), ATPase-like, ParA/MinD (InterPro:IPR019591); BEST Arabidopsis thaliana protein match is: IND1(iron-sulfur protein required for NADH dehydrogenase)-like (TAIR:AT4G19540.1); Has 16372 Blast hits to 16340 proteins in 2775 species: Archae - 600; Bacteria - 10162; Metazoa - 436; Fungi - 428; Plants - 202; Viruses - 0; Other Eukaryotes - 4544 (source: NCBI BLink). & (gnl|cdd|38232 : 313.0) no description available & (gnl|cdd|73300 : 237.0) no description available & (reliability: 1630.0) & (original description: Putative HCF101, Description = Fe-S cluster assembly factor HCF101, chloroplastic, PFAM = PF06155;PF10609;PF01883)' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf08984_469484-475550' '(at3g26710 : 312.0) cofactor assembly of complex C (CCB1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome b6f complex assembly; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3529 (InterPro:IPR021919); Has 212 Blast hits to 212 proteins in 63 species: Archae - 0; Bacteria - 77; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 624.0) & (original description: Putative CCB1, Description = Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1, chloroplastic, PFAM = PF12046)' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf09078_166495-172201' '(at4g01940 : 220.0) Encodes a protein containing the NFU domain that may be involved in iron-sulfur cluster assembly. Part of a five member gene family, more closely related to NFU2 and 3 than to NFU4 and 5. Targeted to the chloroplast.; NFU domain protein 1 (NFU1); CONTAINS InterPro DOMAIN/s: NIF system FeS cluster assembly, NifU, C-terminal (InterPro:IPR001075); BEST Arabidopsis thaliana protein match is: NIFU-like protein 2 (TAIR:AT5G49940.1); Has 4565 Blast hits to 4561 proteins in 1155 species: Archae - 11; Bacteria - 2225; Metazoa - 159; Fungi - 160; Plants - 186; Viruses - 3; Other Eukaryotes - 1821 (source: NCBI BLink). & (gnl|cdd|37569 : 88.6) no description available & (gnl|cdd|64941 : 80.6) no description available & (reliability: 440.0) & (original description: Putative cnfU, Description = Thioredoxin-like protein, PFAM = PF01106;PF01106)' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf11178_176288-178839' '(gnl|cdd|79254 : 320.0) no description available & (p12207|ycf4_tobac : 289.0) Photosystem I assembly protein ycf4 - Nicotiana tabacum (Common tobacco) & (atcg00520 : 251.0) Encodes a protein required for photosystem I assembly and stability. In cyanobacteria, loss of function mutation in this gene increases PSII/PSI ratio without any influence on photoautotrophic growth.; YCF4; FUNCTIONS IN: unfolded protein binding; INVOLVED IN: photosystem I assembly; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I assembly protein Ycf4 (InterPro:IPR003359). & (reliability: 502.0) & (original description: Putative ycf4, Description = Photosystem I assembly protein Ycf4, PFAM = PF02392)' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf11383_35247-37864' '(at1g54500 : 162.0) Rubredoxin-like superfamily protein; FUNCTIONS IN: electron carrier activity, metal ion binding; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubredoxin, iron-binding site (InterPro:IPR018527), Rubredoxin-type Fe(Cys)4 protein (InterPro:IPR004039); Has 3108 Blast hits to 3080 proteins in 1023 species: Archae - 186; Bacteria - 2587; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 283 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative rub, Description = Rubredoxin, PFAM = PF00301)' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf11468_77396-89471' '(at3g10670 : 180.0) Plastidic SufC-like ATP-binding cassette/ATPase essential for Arabidopsis embryogenesis. Involved in the biogenesis and/or repair of oxidatively damaged FeñS clusters. Expressed in embryos and meristems.; non-intrinsic ABC protein 7 (NAP7); FUNCTIONS IN: protein binding, ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: iron-sulfur cluster assembly, thylakoid membrane organization, embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase SufC, SUF system FeS cluster assembly (InterPro:IPR010230), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT4G33460.1); Has 256475 Blast hits to 243565 proteins in 3618 species: Archae - 5159; Bacteria - 209774; Metazoa - 3736; Fungi - 3348; Plants - 2780; Viruses - 4; Other Eukaryotes - 31674 (source: NCBI BLink). & (gnl|cdd|30745 : 141.0) no description available & (reliability: 360.0) & (original description: Putative sufC, Description = ABC transporter ABCI.6, PFAM = )' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf11895_307951-312936' '(at4g37200 : 305.0) Encodes thioredoxin-like protein with disulfide reductase activity that is involved in the biogenesis of the plastid cytochrome b6f complex. Protein is located in the thylakoid membrane with the C-terminal hydrophilic portion, containing the thioredoxin like domain, extending into the thylakoid lumen.; HIGH CHLOROPHYLL FLUORESCENCE 164 (HCF164); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cytochrome b6f complex assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast thylakoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin X (TAIR:AT1G50320.1); Has 12708 Blast hits to 12383 proteins in 2440 species: Archae - 136; Bacteria - 7708; Metazoa - 1002; Fungi - 428; Plants - 950; Viruses - 3; Other Eukaryotes - 2481 (source: NCBI BLink). & (gnl|cdd|48499 : 216.0) no description available & (reliability: 610.0) & (original description: Putative txlA, Description = Thioredoxin-like protein, PFAM = PF00085)' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf19155_17884-23983' '(at5g45680 : 211.0) Peptidyl-Prolyl Isomerase located in chloroplast thylakoid lumen; FK506-binding protein 13 (FKBP13); FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid lumen, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FK506-binding protein 16-2 (TAIR:AT4G39710.1); Has 10267 Blast hits to 9756 proteins in 1768 species: Archae - 130; Bacteria - 5575; Metazoa - 1746; Fungi - 494; Plants - 780; Viruses - 0; Other Eukaryotes - 1542 (source: NCBI BLink). & (gnl|cdd|35769 : 133.0) no description available & (gnl|cdd|30891 : 132.0) no description available & (q41649|fkb15_vicfa : 85.5) FK506-binding protein 2 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (15 kDa FKBP) (FKBP-15) - Vicia faba (Broad bean) & (reliability: 422.0) & (original description: Putative FKBP13, Description = Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic, PFAM = PF00254)' T '29.8' 'protein.assembly and cofactor ligation' 'niben101scf30958_23835-32787' '(at3g24430 : 814.0) encodes a MRP-like protein with a nucleotide-binding domain.; HIGH-CHLOROPHYLL-FLUORESCENCE 101 (HCF101); FUNCTIONS IN: ATP binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mrp, conserved site (InterPro:IPR000808), Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376), Protein of unknown function DUF59 (InterPro:IPR002744), ATPase-like, ParA/MinD (InterPro:IPR019591); BEST Arabidopsis thaliana protein match is: IND1(iron-sulfur protein required for NADH dehydrogenase)-like (TAIR:AT4G19540.1); Has 16372 Blast hits to 16340 proteins in 2775 species: Archae - 600; Bacteria - 10162; Metazoa - 436; Fungi - 428; Plants - 202; Viruses - 0; Other Eukaryotes - 4544 (source: NCBI BLink). & (gnl|cdd|38232 : 312.0) no description available & (gnl|cdd|83937 : 239.0) no description available & (reliability: 1628.0) & (original description: Putative mrp, Description = Iron-sulfur cluster carrier protein, PFAM = PF10609;PF01883;PF06155)' T '30' 'signalling' '' '' '30.1' 'signalling.in sugar and nutrient physiology' 'nbv0.3scaffold277_65479-69095' '(gnl|cdd|67150 : 206.0) no description available & (at1g66350 : 196.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8s4w7|gai1_vitvi : 184.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 388.0) & (original description: Putative GRAS2, Description = GRAS family protein, PFAM = PF03514)' T '30.1' 'signalling.in sugar and nutrient physiology' 'nbv0.3scaffold5200_44943-64712' '(q8s4w7|gai1_vitvi : 202.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g14920 : 189.0) Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA.; GIBBERELLIC ACID INSENSITIVE (GAI); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT2G01570.1); Has 2718 Blast hits to 2657 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2714; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 370.0) & (original description: Putative DELLA2, Description = DELLA protein 2, PFAM = PF03514)' T '30.1' 'signalling.in sugar and nutrient physiology' 'nbv0.3scaffold8467_5298-10363' '(at4g35290 : 1098.0) Encodes a putative glutamate receptor like-protein, member of Putative ligand-gated ion channel subunit family; glutamate receptor 2 (GLUR2); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus, cellular sodium ion homeostasis, cellular potassium ion homeostasis; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 2 (TAIR:AT2G17260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7xp59|glr31_orysa : 920.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (gnl|cdd|36270 : 429.0) no description available & (gnl|cdd|84482 : 219.0) no description available & (reliability: 2196.0) & (original description: Putative ACL1, Description = Glutamate receptor, PFAM = PF00497;PF01094;PF00060)' T '30.1' 'signalling.in sugar and nutrient physiology' 'nbv0.3scaffold18161_27117-31095' '(at5g55850 : 95.9) NOI protein; NOI; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to nitrate; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: RPM1-interacting protein 4 (RIN4) family protein (TAIR:AT2G04410.1). & (gnl|cdd|69165 : 82.9) no description available & (reliability: 191.8) & (original description: Putative NOI, Description = BnaC03g51060D protein, PFAM = PF05627)' T '30.1' 'signalling.in sugar and nutrient physiology' 'nbv0.3scaffold18179_16296-29764' '(at4g01900 : 190.0) encodes a PII protein that may function as part of a signal transduction network involved in perceiving the status of carbon and organic nitrogen. Forms a protein complex with N-acetylglutamate kinase and regulates the kinase activity by relieving the feedback inhibition of the kinase by arginine. Regulates acetyl-CoA carboxylase activity.; GLNB1 homolog (GLB1); FUNCTIONS IN: acetylglutamate kinase regulator activity; INVOLVED IN: response to light stimulus, nitrogen compound metabolic process, regulation of arginine biosynthetic process via ornithine, anthocyanin biosynthetic process, response to sucrose stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal (InterPro:IPR015867), Nitrogen regulatory protein PII (InterPro:IPR002187), Nitrogen regulatory protein PII, conserved site (InterPro:IPR017918), Nitrogen regulatory PII-like, alpha/beta (InterPro:IPR011322); Has 6977 Blast hits to 6975 proteins in 1636 species: Archae - 359; Bacteria - 5100; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 1458 (source: NCBI BLink). & (gnl|cdd|30695 : 113.0) no description available & (reliability: 380.0) & (original description: Putative GLB1, Description = Nitrogen regulatory protein P-II homolog, PFAM = PF00543)' T '30.1' 'signalling.in sugar and nutrient physiology' 'nbv0.3scaffold19691_28534-32340' '(gnl|cdd|70010 : 261.0) no description available & (at3g54040 : 159.0) PAR1 protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PAR1 (InterPro:IPR009489); BEST Arabidopsis thaliana protein match is: PAR1 protein (TAIR:AT5G52390.1); Has 82 Blast hits to 82 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative BnaA04g04370D, Description = BnaA04g04370D protein, PFAM = PF06521)' T '30.1' 'signalling.in sugar and nutrient physiology' 'nbv0.3scaffold26660_12320-17815' '(gnl|cdd|67150 : 330.0) no description available & (q8s4w7|gai1_vitvi : 309.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 299.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 576.0) & (original description: Putative ATA, Description = Transcription factor, PFAM = PF03514)' T '30.1' 'signalling.in sugar and nutrient physiology' 'nbv0.3scaffold41925_12621-18533' '(at4g16360 : 346.0) 5'-AMP-activated protein kinase beta-2 subunit protein; FUNCTIONS IN: AMP-activated protein kinase activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 5-AMP-activated protein kinase, beta subunit, interaction domain (InterPro:IPR006828); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase beta-2 subunit protein (TAIR:AT5G21170.1). & (gnl|cdd|36829 : 179.0) no description available & (gnl|cdd|30346 : 112.0) no description available & (reliability: 692.0) & (original description: Putative KINB2, Description = SNF1-related protein kinase regulatory subunit beta-2, PFAM = PF16561;PF04739)' T '30.1' 'signalling.in sugar and nutrient physiology' 'nbv0.3scaffold48337_29-4660' '(at2g04410 : 85.5) RPM1-interacting protein 4 (RIN4) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: RPM1-interacting protein 4 (RIN4) family protein (TAIR:AT5G55850.3); Has 281 Blast hits to 280 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 279; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative At2g04410, Description = RPM1-interacting protein 4-like protein, PFAM = PF05627)' T '30.1' 'signalling.in sugar and nutrient physiology' 'nbv0.3scaffold56859_1-7616' '(at3g01090 : 419.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase; SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02723|rkin1_secce : 343.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (gnl|cdd|35803 : 295.0) no description available & (gnl|cdd|29142 : 259.0) no description available & (reliability: 838.0) & (original description: Putative SNF1, Description = SNF1, PFAM = PF00069;PF02149)' T '30.1' 'signalling.in sugar and nutrient physiology' 'nbv0.3scaffold72292_1-8784' '(at4g15900 : 498.0) Mutations confer hypersensitivity to glucose and sucrose and augments sensitivity to cytokinin, ethylene, ABA and auxin. Encodes a nuclear WD40 protein that is imported into the nucleus. Essential for plant innate immunity. Interacts with MOS4 and AtCDC5. It is also predicted to have two DWD motifs. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase, and may affect the stability of AKIN10.; pleiotropic regulatory locus 1 (PRL1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G16650.1); Has 84704 Blast hits to 34179 proteins in 878 species: Archae - 64; Bacteria - 9610; Metazoa - 34201; Fungi - 18356; Plants - 10881; Viruses - 0; Other Eukaryotes - 11592 (source: NCBI BLink). & (gnl|cdd|35506 : 473.0) no description available & (gnl|cdd|29257 : 209.0) no description available & (p93107|pf20_chlre : 99.4) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 996.0) & (original description: Putative PLRG1, Description = Pleiotropic regulator 1-like protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '30.1' 'signalling.in sugar and nutrient physiology' 'nbv0.3scaffold88501_1-2603' '(at5g64260 : 409.0) EXORDIUM like 2 (EXL2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: EXORDIUM like 4 (TAIR:AT5G09440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68252 : 390.0) no description available & (reliability: 818.0) & (original description: Putative EXL2, Description = Protein EXORDIUM-like 2, PFAM = PF04674)' T '30.1' 'signalling.in sugar and nutrient physiology' 'nbv0.3scaffold90452_1164-4726' '(gnl|cdd|70010 : 176.0) no description available & (at5g52390 : 119.0) PAR1 protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: PAR1 (InterPro:IPR009489); BEST Arabidopsis thaliana protein match is: PAR1 protein (TAIR:AT3G54040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative BnaA04g04370D, Description = BnaA04g04370D protein, PFAM = PF06521)' T '30.1' 'signalling.in sugar and nutrient physiology' 'nbv0.3scaffold135547_1-1448' '(q84tq7|gai_goshi : 540.0) DELLA protein GAI (Gibberellic acid-insensitive mutant protein) (GhGAI) - Gossypium hirsutum (Upland cotton) & (at2g01570 : 486.0) Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.; REPRESSOR OF GA1-3 1 (RGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT1G14920.1); Has 2724 Blast hits to 2666 proteins in 317 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 4; Plants - 2709; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|67150 : 321.0) no description available & (reliability: 924.0) & (original description: Putative d8, Description = DELLA protein DWARF8, PFAM = PF03514;PF12041)' T '30.1' 'signalling.in sugar and nutrient physiology' 'nbv0.5scaffold26_43608-47488' '(gnl|cdd|67150 : 202.0) no description available & (at1g66350 : 176.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8s4w7|gai1_vitvi : 172.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 346.0) & (original description: Putative GRAS2, Description = GRAS family protein, PFAM = PF03514)' T '30.1' 'signalling.in sugar and nutrient physiology' 'nbv0.5scaffold871_376403-382917' '(at2g29120 : 704.0) member of Putative ligand-gated ion channel subunit family; glutamate receptor 2.7 (GLR2.7); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: vacuole; EXPRESSED IN: stem, cotyledon, leaf whorl, leaf, stamen; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 2.8 (TAIR:AT2G29110.1); Has 5217 Blast hits to 5121 proteins in 549 species: Archae - 76; Bacteria - 910; Metazoa - 3278; Fungi - 0; Plants - 643; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink). & (gnl|cdd|36270 : 406.0) no description available & (q7xp59|glr31_orysa : 352.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (gnl|cdd|85237 : 211.0) no description available & (reliability: 1408.0) & (original description: Putative GLR3, Description = Glutamate receptor, PFAM = PF00060;PF01094;PF00497)' T '30.1' 'signalling.in sugar and nutrient physiology' 'nbv0.5scaffold1119_97121-156704' '(gnl|cdd|68252 : 293.0) no description available & (at4g08950 : 275.0) EXORDIUM (EXO); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to brassinosteroid stimulus; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: Phosphate-responsive 1 family protein (TAIR:AT1G35140.1); Has 398 Blast hits to 398 proteins in 24 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 550.0) & (original description: Putative EXL1, Description = Phosphate-responsive 1 family protein, PFAM = PF04674)' T '30.1' 'signalling.in sugar and nutrient physiology' 'nbv0.5scaffold1345_34932-42671' '(at3g01090 : 422.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase; SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02723|rkin1_secce : 345.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (gnl|cdd|35803 : 298.0) no description available & (gnl|cdd|29142 : 262.0) no description available & (reliability: 844.0) & (original description: Putative snfA, Description = 5'-AMP-activated protein kinase catalytic subunit alpha-2, PFAM = PF00069;PF02149)' T '30.1' 'signalling.in sugar and nutrient physiology' 'nbv0.5scaffold1969_676-11530' '(at3g01090 : 822.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase; SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02723|rkin1_secce : 632.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (gnl|cdd|35808 : 369.0) no description available & (gnl|cdd|29142 : 311.0) no description available & (reliability: 1644.0) & (original description: Putative KIN10, Description = SNF1-related protein kinase catalytic subunit alpha KIN10, PFAM = PF00627;PF00069)' T '30.1' 'signalling.in sugar and nutrient physiology' 'nbv0.5scaffold6266_9739-15234' '(gnl|cdd|67150 : 331.0) no description available & (q8s4w7|gai1_vitvi : 310.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 299.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 578.0) & (original description: Putative ATA, Description = Transcription factor, PFAM = PF03514)' T '30.1' 'signalling.in sugar and nutrient physiology' 'nbv0.5scaffold7913_1-6139' '(at3g01090 : 697.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase; SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02723|rkin1_secce : 580.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (gnl|cdd|35808 : 352.0) no description available & (gnl|cdd|29142 : 300.0) no description available & (reliability: 1394.0) & (original description: Putative PKIN1, Description = SNF1-related protein kinase, PFAM = PF00069;PF02149)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben044scf00001507ctg005_9025-12721' '(at3g12890 : 119.0) Encodes a protein belonging to a class of CCT (CONSTANS, CONSTANS-like, TOC1) domain proteins. The protein contains a 43 amino acid-long sequence with high homology to the CCT domain but does not have any B-box or GATA-type zinc finger domains. Functions as a transcriptional activator and regulates the expression of at least a subset of sugar-inducible genes.; activator of spomin::LUC2 (ASML2); CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT5G41380.1); Has 1405 Blast hits to 1405 proteins in 99 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1344; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative PGSC0003DMG400022124, Description = CCT motif family protein, PFAM = PF06203)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben044scf00003256ctg021_1876-5440' '(gnl|cdd|67150 : 143.0) no description available & (q5ne24|nsp2_medtr : 107.0) Nodulation signaling pathway 2 protein - Medicago truncatula (Barrel medic) & (at5g17490 : 90.5) DELLA subfamily member involved in GA signal transduction; RGA-like protein 3 (RGL3); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative GRAS5, Description = GRAS5, PFAM = PF03514)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben044scf00004697ctg000_1-1127' '(at5g64260 : 135.0) EXORDIUM like 2 (EXL2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: EXORDIUM like 4 (TAIR:AT5G09440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68252 : 101.0) no description available & (reliability: 270.0) & (original description: Putative EXL2, Description = Phosphate-responsive 1 family protein, PFAM = PF04674)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben044scf00006675ctg009_19530-25593' '(at2g24720 : 499.0) member of Putative ligand-gated ion channel subunit family; glutamate receptor 2.2 (GLR2.2); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 2.3 (TAIR:AT2G24710.1); Has 5780 Blast hits to 5641 proteins in 724 species: Archae - 68; Bacteria - 1382; Metazoa - 3425; Fungi - 0; Plants - 653; Viruses - 0; Other Eukaryotes - 252 (source: NCBI BLink). & (q7xp59|glr31_orysa : 229.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (gnl|cdd|85237 : 207.0) no description available & (gnl|cdd|36270 : 182.0) no description available & (reliability: 998.0) & (original description: Putative Os09g0428600, Description = Os09g0428600 protein, PFAM = PF01094)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben044scf00010002ctg016_2629-6458' '(gnl|cdd|67150 : 257.0) no description available & (q8s4w7|gai1_vitvi : 254.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g14920 : 253.0) Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA.; GIBBERELLIC ACID INSENSITIVE (GAI); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT2G01570.1); Has 2718 Blast hits to 2657 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2714; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative GRAS32, Description = GRAS32 protein, PFAM = PF03514)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben044scf00010041ctg003_1496-5321' '(q8s4w7|gai1_vitvi : 717.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at2g01570 : 661.0) Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.; REPRESSOR OF GA1-3 1 (RGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT1G14920.1); Has 2724 Blast hits to 2666 proteins in 317 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 4; Plants - 2709; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|67150 : 352.0) no description available & (reliability: 1282.0) & (original description: Putative GAI, Description = DELLA protein GAI, PFAM = PF12041;PF03514)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben044scf00011451ctg002_2711-10085' '(at1g05200 : 1199.0) member of Putative ligand-gated ion channel subunit family; glutamate receptor 3.4 (GLR3.4); FUNCTIONS IN: protein binding, intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Glutamate receptor-related (InterPro:IPR015683), GPCR, family 3, gamma-aminobutyric acid receptor, type B (InterPro:IPR002455), Extracellular ligand-binding receptor (InterPro:IPR001828), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 3.5 (TAIR:AT2G32390.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7xp59|glr31_orysa : 973.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (gnl|cdd|36270 : 449.0) no description available & (gnl|cdd|84482 : 231.0) no description available & (reliability: 2398.0) & (original description: Putative PGSC0003DMG400005267, Description = Glutamate receptor, PFAM = PF01094;PF00060;PF00497)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben044scf00012180ctg026_1-6645' '(at1g08490 : 490.0) Chloroplastic NifS-like protein that can catalyze the conversion of cysteine into alanine and elemental sulfur (S(0)) and of selenocysteine into alanine and elemental Se (Se(0)). Overexpression enhances selenium tolerance and accumulation.; chloroplastic NIFS-like cysteine desulfurase (CPNIFS); FUNCTIONS IN: transaminase activity, selenocysteine lyase activity, cysteine desulfurase activity; INVOLVED IN: iron incorporation into metallo-sulfur cluster, response to selenium ion, sulfur metabolic process, selenium metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Cysteine desulfurase, SufS (InterPro:IPR010970), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: nitrogen fixation S (NIFS)-like 1 (TAIR:AT5G65720.1); Has 22660 Blast hits to 22653 proteins in 2897 species: Archae - 350; Bacteria - 15408; Metazoa - 379; Fungi - 404; Plants - 268; Viruses - 1; Other Eukaryotes - 5850 (source: NCBI BLink). & (gnl|cdd|30866 : 357.0) no description available & (gnl|cdd|36762 : 251.0) no description available & (reliability: 980.0) & (original description: Putative csd, Description = Cysteine desulfurase, PFAM = PF00266)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben044scf00019202ctg009_17616-20554' '(gnl|cdd|68252 : 440.0) no description available & (at4g08950 : 418.0) EXORDIUM (EXO); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to brassinosteroid stimulus; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: Phosphate-responsive 1 family protein (TAIR:AT1G35140.1); Has 398 Blast hits to 398 proteins in 24 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 836.0) & (original description: Putative EXO, Description = Protein EXORDIUM, PFAM = PF04674)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben044scf00019931ctg002_18-9292' '(at3g01090 : 856.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase; SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02723|rkin1_secce : 660.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (gnl|cdd|35808 : 368.0) no description available & (gnl|cdd|29142 : 310.0) no description available & (reliability: 1712.0) & (original description: Putative KIN10, Description = SNF1-related protein kinase catalytic subunit alpha KIN10, PFAM = PF02149;PF00069;PF00627)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben044scf00020699ctg002_520-6115' '(at2g29110 : 775.0) member of Putative ligand-gated ion channel subunit family; glutamate receptor 2.8 (GLR2.8); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 2.9 (TAIR:AT2G29100.1); Has 5212 Blast hits to 5102 proteins in 531 species: Archae - 73; Bacteria - 810; Metazoa - 3457; Fungi - 0; Plants - 647; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (q7xp59|glr31_orysa : 474.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (gnl|cdd|36270 : 425.0) no description available & (gnl|cdd|84482 : 233.0) no description available & (reliability: 1550.0) & (original description: Putative PGSC0003DMG400026518, Description = Glutamate receptor, PFAM = PF00497;PF01094;PF00060)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben044scf00024468ctg001_3812-9157' '(at4g35290 : 1095.0) Encodes a putative glutamate receptor like-protein, member of Putative ligand-gated ion channel subunit family; glutamate receptor 2 (GLUR2); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus, cellular sodium ion homeostasis, cellular potassium ion homeostasis; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 2 (TAIR:AT2G17260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7xp59|glr31_orysa : 908.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (gnl|cdd|36270 : 424.0) no description available & (gnl|cdd|84482 : 214.0) no description available & (reliability: 2190.0) & (original description: Putative ACL1, Description = Glutamate receptor, PFAM = PF00060;PF01094;PF00497)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben044scf00027265ctg003_1906-9245' '(at1g05200 : 1212.0) member of Putative ligand-gated ion channel subunit family; glutamate receptor 3.4 (GLR3.4); FUNCTIONS IN: protein binding, intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Glutamate receptor-related (InterPro:IPR015683), GPCR, family 3, gamma-aminobutyric acid receptor, type B (InterPro:IPR002455), Extracellular ligand-binding receptor (InterPro:IPR001828), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 3.5 (TAIR:AT2G32390.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7xp59|glr31_orysa : 992.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (gnl|cdd|36270 : 457.0) no description available & (gnl|cdd|84482 : 240.0) no description available & (reliability: 2424.0) & (original description: Putative ACL1, Description = Glutamate receptor, PFAM = PF01094;PF00060;PF00497)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben044scf00042250ctg003_4860-10933' '(at5g55850 : 90.9) NOI protein; NOI; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to nitrate; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: RPM1-interacting protein 4 (RIN4) family protein (TAIR:AT2G04410.1). & (gnl|cdd|69165 : 83.3) no description available & (reliability: 181.8) & (original description: Putative NOI, Description = RPM1-interacting protein 4 (RIN4) family protein isoform 2, PFAM = PF05627)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben044scf00057436ctg000_7041-10651' '(gnl|cdd|67150 : 245.0) no description available & (q8s4w7|gai1_vitvi : 238.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 237.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 434.0) & (original description: Putative GRAS34, Description = GRAS34 protein, PFAM = PF03514)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101ctg14473_1-2685' '(gnl|cdd|70010 : 296.0) no description available & (at5g52390 : 197.0) PAR1 protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: PAR1 (InterPro:IPR009489); BEST Arabidopsis thaliana protein match is: PAR1 protein (TAIR:AT3G54040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative At5g52390, Description = PAR1 protein, PFAM = PF06521)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf00063_510003-516210' '(at3g01090 : 731.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase; SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02723|rkin1_secce : 620.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (gnl|cdd|35808 : 362.0) no description available & (gnl|cdd|29142 : 306.0) no description available & (reliability: 1462.0) & (original description: Putative KIN10, Description = SNF1-related protein kinase catalytic subunit alpha KIN10, PFAM = PF02149;PF00069;PF00627)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf00069_1406419-1428348' '(at5g39790 : 264.0) Encodes a chloroplast localized protein with starch binding activity that may be involved in carbohydrate metabolism.; 5'-AMP-activated protein kinase-related; BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase-related (TAIR:AT1G27070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 528.0) & (original description: Putative PTST, Description = 5'-AMP-activated protein kinase subunit beta-1, PFAM = PF16561)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf00090_348425-356882' '(at2g29100 : 355.0) member of Putative ligand-gated ion channel subunit family; glutamate receptor 2.9 (GLR2.9); FUNCTIONS IN: protein binding, intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: central cell; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 2.8 (TAIR:AT2G29110.1); Has 5155 Blast hits to 5039 proteins in 487 species: Archae - 44; Bacteria - 751; Metazoa - 3546; Fungi - 0; Plants - 638; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (q7xp59|glr31_orysa : 274.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (gnl|cdd|36270 : 254.0) no description available & (gnl|cdd|84482 : 133.0) no description available & (reliability: 710.0) & (original description: Putative PGSC0003DMG400007968, Description = Glutamate receptor, PFAM = PF00497;PF01094;PF00060)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf00234_143699-148985' '(at2g29110 : 773.0) member of Putative ligand-gated ion channel subunit family; glutamate receptor 2.8 (GLR2.8); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 2.9 (TAIR:AT2G29100.1); Has 5212 Blast hits to 5102 proteins in 531 species: Archae - 73; Bacteria - 810; Metazoa - 3457; Fungi - 0; Plants - 647; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (q7xp59|glr31_orysa : 471.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (gnl|cdd|36270 : 379.0) no description available & (gnl|cdd|84482 : 200.0) no description available & (reliability: 1546.0) & (original description: Putative PGSC0003DMG400009186, Description = Glutamate receptor, PFAM = PF00060;PF00497;PF01094)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf00268_459199-466477' '(at2g04410 : 99.4) RPM1-interacting protein 4 (RIN4) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: RPM1-interacting protein 4 (RIN4) family protein (TAIR:AT5G55850.3); Has 281 Blast hits to 280 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 279; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|69165 : 84.0) no description available & (reliability: 181.8) & (original description: Putative At2g04410, Description = RPM1-interacting protein 4-like protein, PFAM = PF05627)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf00414_1058802-1065095' '(at5g55850 : 93.2) NOI protein; NOI; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to nitrate; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: RPM1-interacting protein 4 (RIN4) family protein (TAIR:AT2G04410.1). & (gnl|cdd|69165 : 84.4) no description available & (reliability: 186.4) & (original description: Putative NOI, Description = BnaC03g51060D protein, PFAM = PF05627)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf00687_37152-43616' '(at4g01900 : 181.0) encodes a PII protein that may function as part of a signal transduction network involved in perceiving the status of carbon and organic nitrogen. Forms a protein complex with N-acetylglutamate kinase and regulates the kinase activity by relieving the feedback inhibition of the kinase by arginine. Regulates acetyl-CoA carboxylase activity.; GLNB1 homolog (GLB1); FUNCTIONS IN: acetylglutamate kinase regulator activity; INVOLVED IN: response to light stimulus, nitrogen compound metabolic process, regulation of arginine biosynthetic process via ornithine, anthocyanin biosynthetic process, response to sucrose stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal (InterPro:IPR015867), Nitrogen regulatory protein PII (InterPro:IPR002187), Nitrogen regulatory protein PII, conserved site (InterPro:IPR017918), Nitrogen regulatory PII-like, alpha/beta (InterPro:IPR011322); Has 6977 Blast hits to 6975 proteins in 1636 species: Archae - 359; Bacteria - 5100; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 1458 (source: NCBI BLink). & (gnl|cdd|84850 : 102.0) no description available & (reliability: 362.0) & (original description: Putative glb, Description = Nitrogen regulatory protein P-II, PFAM = PF00543)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf00747_1355096-1367995' '(at2g29110 : 758.0) member of Putative ligand-gated ion channel subunit family; glutamate receptor 2.8 (GLR2.8); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 2.9 (TAIR:AT2G29100.1); Has 5212 Blast hits to 5102 proteins in 531 species: Archae - 73; Bacteria - 810; Metazoa - 3457; Fungi - 0; Plants - 647; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (q7xp59|glr31_orysa : 453.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (gnl|cdd|36270 : 425.0) no description available & (gnl|cdd|84482 : 233.0) no description available & (reliability: 1516.0) & (original description: Putative GLR3, Description = Glutamate receptor, PFAM = PF00060;PF00497;PF01094)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf00747_1362587-1368032' '(at2g29110 : 758.0) member of Putative ligand-gated ion channel subunit family; glutamate receptor 2.8 (GLR2.8); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 2.9 (TAIR:AT2G29100.1); Has 5212 Blast hits to 5102 proteins in 531 species: Archae - 73; Bacteria - 810; Metazoa - 3457; Fungi - 0; Plants - 647; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (q7xp59|glr31_orysa : 452.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (gnl|cdd|36270 : 424.0) no description available & (gnl|cdd|84482 : 233.0) no description available & (reliability: 1516.0) & (original description: Putative ACRE141, Description = Glutamate receptor, PFAM = PF01094;PF00060;PF00497)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf00891_506338-513360' '(at1g05200 : 1173.0) member of Putative ligand-gated ion channel subunit family; glutamate receptor 3.4 (GLR3.4); FUNCTIONS IN: protein binding, intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Glutamate receptor-related (InterPro:IPR015683), GPCR, family 3, gamma-aminobutyric acid receptor, type B (InterPro:IPR002455), Extracellular ligand-binding receptor (InterPro:IPR001828), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 3.5 (TAIR:AT2G32390.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7xp59|glr31_orysa : 942.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (gnl|cdd|36270 : 455.0) no description available & (gnl|cdd|84482 : 236.0) no description available & (reliability: 2346.0) & (original description: Putative ACL1, Description = Glutamate receptor, PFAM = PF01094;PF00060;PF00497)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf01100_156400-162590' '(at2g04410 : 85.9) RPM1-interacting protein 4 (RIN4) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: RPM1-interacting protein 4 (RIN4) family protein (TAIR:AT5G55850.3); Has 281 Blast hits to 280 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 279; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative At2g04410, Description = RPM1-interacting protein 4-like protein, PFAM = PF05627)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf01212_196431-202132' '(at2g29100 : 432.0) member of Putative ligand-gated ion channel subunit family; glutamate receptor 2.9 (GLR2.9); FUNCTIONS IN: protein binding, intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: central cell; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 2.8 (TAIR:AT2G29110.1); Has 5155 Blast hits to 5039 proteins in 487 species: Archae - 44; Bacteria - 751; Metazoa - 3546; Fungi - 0; Plants - 638; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (q7xp59|glr31_orysa : 329.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (gnl|cdd|36270 : 290.0) no description available & (gnl|cdd|84482 : 180.0) no description available & (reliability: 864.0) & (original description: Putative SlGLR1.2, Description = Glutamate receptor, PFAM = PF00060;PF00497;PF01094)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf01221_596296-599615' '(gnl|cdd|67150 : 176.0) no description available & (at1g66350 : 130.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q6ei06|gaip_cucma : 121.0) DELLA protein GAIP (Gibberellic acid-insensitive phloem protein) (GAIP) (CmGAIP) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 252.0) & (original description: Putative GRAS41, Description = DELLA protein GAI1, putative, PFAM = PF03514)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf01221_596536-599639' '(gnl|cdd|67150 : 174.0) no description available & (at3g03450 : 101.0) Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.; RGA-like 2 (RGL2); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2697 Blast hits to 2637 proteins in 314 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2690; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q6ei06|gaip_cucma : 97.8) DELLA protein GAIP (Gibberellic acid-insensitive phloem protein) (GAIP) (CmGAIP) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 202.0) & (original description: Putative GRAS38, Description = GRAS family transcription factor, putative, PFAM = PF03514)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf01278_1089378-1093074' '(at3g12890 : 117.0) Encodes a protein belonging to a class of CCT (CONSTANS, CONSTANS-like, TOC1) domain proteins. The protein contains a 43 amino acid-long sequence with high homology to the CCT domain but does not have any B-box or GATA-type zinc finger domains. Functions as a transcriptional activator and regulates the expression of at least a subset of sugar-inducible genes.; activator of spomin::LUC2 (ASML2); CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT5G41380.1); Has 1405 Blast hits to 1405 proteins in 99 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1344; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative ASL2, Description = CCT motif family protein, PFAM = PF06203)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf01353_99074-102265' '(gnl|cdd|67150 : 229.0) no description available & (at3g03450 : 186.0) Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.; RGA-like 2 (RGL2); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2697 Blast hits to 2637 proteins in 314 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2690; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q8s4w7|gai1_vitvi : 176.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 372.0) & (original description: Putative GRAS2, Description = GRAS family transcription factor, PFAM = PF03514)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf01365_673693-677087' '(gnl|cdd|67150 : 239.0) no description available & (at2g04890 : 190.0) Encodes a scarecrow-like protein (SCL21). Member of GRAS gene family.; SCARECROW-like 21 (SCL21); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G48150.2); Has 2478 Blast hits to 2441 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2474; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8s4w7|gai1_vitvi : 187.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 364.0) & (original description: Putative glysoja_024156, Description = DELLA protein GAI, PFAM = PF03514)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf01406_296614-300449' '(gnl|cdd|70010 : 231.0) no description available & (at3g54040 : 170.0) PAR1 protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PAR1 (InterPro:IPR009489); BEST Arabidopsis thaliana protein match is: PAR1 protein (TAIR:AT5G52390.1); Has 82 Blast hits to 82 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative BnaA04g04370D, Description = BnaA04g04370D protein, PFAM = PF06521)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf01552_223990-235429' '(at3g01090 : 667.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase; SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02723|rkin1_secce : 559.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (gnl|cdd|35808 : 349.0) no description available & (gnl|cdd|29142 : 304.0) no description available & (reliability: 1334.0) & (original description: Putative PKIN1, Description = SNF1-related protein kinase, PFAM = PF02149;PF00069)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf01628_114962-118643' '(gnl|cdd|70010 : 134.0) no description available & (at3g54040 : 81.3) PAR1 protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PAR1 (InterPro:IPR009489); BEST Arabidopsis thaliana protein match is: PAR1 protein (TAIR:AT5G52390.1); Has 82 Blast hits to 82 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative PGSC0003DMG400011087, Description = PAR1-like protein, PFAM = PF06521)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf01695_133488-154477' '(at4g16360 : 327.0) 5'-AMP-activated protein kinase beta-2 subunit protein; FUNCTIONS IN: AMP-activated protein kinase activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 5-AMP-activated protein kinase, beta subunit, interaction domain (InterPro:IPR006828); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase beta-2 subunit protein (TAIR:AT5G21170.1). & (gnl|cdd|36829 : 179.0) no description available & (gnl|cdd|30346 : 113.0) no description available & (reliability: 654.0) & (original description: Putative KINB1, Description = SNF1-related protein kinase regulatory subunit beta-1, PFAM = PF16561;PF04739)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf01849_350142-356511' '(at5g55850 : 95.5) NOI protein; NOI; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to nitrate; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: RPM1-interacting protein 4 (RIN4) family protein (TAIR:AT2G04410.1). & (gnl|cdd|69165 : 83.3) no description available & (reliability: 191.0) & (original description: Putative NOI, Description = BnaC03g51060D protein, PFAM = PF05627)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf01851_158541-219488' '(at2g29120 : 785.0) member of Putative ligand-gated ion channel subunit family; glutamate receptor 2.7 (GLR2.7); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: vacuole; EXPRESSED IN: stem, cotyledon, leaf whorl, leaf, stamen; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 2.8 (TAIR:AT2G29110.1); Has 5217 Blast hits to 5121 proteins in 549 species: Archae - 76; Bacteria - 910; Metazoa - 3278; Fungi - 0; Plants - 643; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink). & (q7xp59|glr31_orysa : 445.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (gnl|cdd|36270 : 415.0) no description available & (gnl|cdd|85237 : 211.0) no description available & (reliability: 1570.0) & (original description: Putative GLR3, Description = Glutamate receptor, PFAM = PF00497;PF00060;PF01094)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf01951_13623-20006' '(gnl|cdd|70010 : 185.0) no description available & (at3g54040 : 141.0) PAR1 protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PAR1 (InterPro:IPR009489); BEST Arabidopsis thaliana protein match is: PAR1 protein (TAIR:AT5G52390.1); Has 82 Blast hits to 82 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative At3g54040, Description = PAR1 protein, PFAM = PF06521)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf02111_1694588-1698204' '(gnl|cdd|67150 : 207.0) no description available & (at3g03450 : 197.0) Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.; RGA-like 2 (RGL2); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2697 Blast hits to 2637 proteins in 314 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2690; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q8s4w7|gai1_vitvi : 184.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 394.0) & (original description: Putative GRAS41, Description = GRAS41 protein, PFAM = PF03514)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf02133_893878-1058966' '(at5g55850 : 93.2) NOI protein; NOI; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to nitrate; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: RPM1-interacting protein 4 (RIN4) family protein (TAIR:AT2G04410.1). & (gnl|cdd|69165 : 81.3) no description available & (reliability: 186.4) & (original description: Putative NOI, Description = BnaC03g51060D protein, PFAM = PF05627)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf02188_304608-310101' '(gnl|cdd|67150 : 327.0) no description available & (q8s4w7|gai1_vitvi : 300.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 295.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 562.0) & (original description: Putative ATA, Description = Transcription factor, PFAM = PF03514)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf02307_43198-50061' '(at1g42540 : 1232.0) member of Putative ligand-gated ion channel subunit family; glutamate receptor 3.3 (GLR3.3); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), GPCR, family 3, gamma-aminobutyric acid receptor, type B (InterPro:IPR002455), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 3.6 (TAIR:AT3G51480.1); Has 6567 Blast hits to 6430 proteins in 489 species: Archae - 28; Bacteria - 758; Metazoa - 4571; Fungi - 0; Plants - 644; Viruses - 2; Other Eukaryotes - 564 (source: NCBI BLink). & (q7xp59|glr31_orysa : 1043.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (gnl|cdd|36270 : 460.0) no description available & (gnl|cdd|85237 : 238.0) no description available & (reliability: 2464.0) & (original description: Putative ACL1, Description = Glutamate receptor, PFAM = PF00060;PF01094;PF00497)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf02537_483886-486815' '(gnl|cdd|68252 : 363.0) no description available & (at5g64260 : 361.0) EXORDIUM like 2 (EXL2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: EXORDIUM like 4 (TAIR:AT5G09440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 722.0) & (original description: Putative EXL2, Description = Protein EXORDIUM-like 2, PFAM = PF04674)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf02537_554832-557797' '(gnl|cdd|68252 : 406.0) no description available & (at4g08950 : 372.0) EXORDIUM (EXO); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to brassinosteroid stimulus; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: Phosphate-responsive 1 family protein (TAIR:AT1G35140.1); Has 398 Blast hits to 398 proteins in 24 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 744.0) & (original description: Putative EXO, Description = Protein EXORDIUM, PFAM = PF04674)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf02537_571988-574944' '(gnl|cdd|68252 : 440.0) no description available & (at4g08950 : 413.0) EXORDIUM (EXO); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to brassinosteroid stimulus; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: Phosphate-responsive 1 family protein (TAIR:AT1G35140.1); Has 398 Blast hits to 398 proteins in 24 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 826.0) & (original description: Putative Os10g0376400, Description = Os10g0376400 protein, PFAM = PF04674)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf02537_674255-677187' '(gnl|cdd|68252 : 341.0) no description available & (at4g08950 : 316.0) EXORDIUM (EXO); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to brassinosteroid stimulus; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: Phosphate-responsive 1 family protein (TAIR:AT1G35140.1); Has 398 Blast hits to 398 proteins in 24 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 632.0) & (original description: Putative Os02g0756800, Description = Os02g0756800 protein, PFAM = PF04674)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf02612_8996-12797' '(q8s4w7|gai1_vitvi : 697.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at2g01570 : 643.0) Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.; REPRESSOR OF GA1-3 1 (RGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT1G14920.1); Has 2724 Blast hits to 2666 proteins in 317 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 4; Plants - 2709; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|67150 : 323.0) no description available & (reliability: 1238.0) & (original description: Putative GAI, Description = DELLA protein GAI, PFAM = PF12041;PF03514)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf02668_541522-558274' '(at2g13440 : 1057.0) glucose-inhibited division family A protein; FUNCTIONS IN: FAD binding; INVOLVED IN: tRNA processing, tRNA wobble uridine modification; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-inhibited division protein A-related (InterPro:IPR002218), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Glucose-inhibited division protein A (InterPro:IPR004416), Glucose-inhibited division protein A-related, conserved site (InterPro:IPR020595); Has 12829 Blast hits to 12787 proteins in 2525 species: Archae - 2; Bacteria - 6632; Metazoa - 144; Fungi - 175; Plants - 52; Viruses - 0; Other Eukaryotes - 5824 (source: NCBI BLink). & (gnl|cdd|81465 : 951.0) no description available & (gnl|cdd|37522 : 863.0) no description available & (reliability: 2114.0) & (original description: Putative gidA, Description = tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG, PFAM = PF13932;PF01134)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf02724_25468-44244' '(at1g08490 : 663.0) Chloroplastic NifS-like protein that can catalyze the conversion of cysteine into alanine and elemental sulfur (S(0)) and of selenocysteine into alanine and elemental Se (Se(0)). Overexpression enhances selenium tolerance and accumulation.; chloroplastic NIFS-like cysteine desulfurase (CPNIFS); FUNCTIONS IN: transaminase activity, selenocysteine lyase activity, cysteine desulfurase activity; INVOLVED IN: iron incorporation into metallo-sulfur cluster, response to selenium ion, sulfur metabolic process, selenium metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Cysteine desulfurase, SufS (InterPro:IPR010970), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: nitrogen fixation S (NIFS)-like 1 (TAIR:AT5G65720.1); Has 22660 Blast hits to 22653 proteins in 2897 species: Archae - 350; Bacteria - 15408; Metazoa - 379; Fungi - 404; Plants - 268; Viruses - 1; Other Eukaryotes - 5850 (source: NCBI BLink). & (gnl|cdd|30866 : 479.0) no description available & (gnl|cdd|36762 : 286.0) no description available & (reliability: 1326.0) & (original description: Putative NFS2, Description = Cysteine desulfurase 1, chloroplastic, PFAM = PF00266)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf03129_199693-214828' '(at4g16360 : 332.0) 5'-AMP-activated protein kinase beta-2 subunit protein; FUNCTIONS IN: AMP-activated protein kinase activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 5-AMP-activated protein kinase, beta subunit, interaction domain (InterPro:IPR006828); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase beta-2 subunit protein (TAIR:AT5G21170.1). & (gnl|cdd|36829 : 178.0) no description available & (gnl|cdd|30346 : 115.0) no description available & (reliability: 664.0) & (original description: Putative KINB1, Description = SNF1-related protein kinase regulatory subunit beta-1, PFAM = PF16561;PF04739)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf03202_1307706-1345029' '(gnl|cdd|67150 : 145.0) no description available & (q5ne24|nsp2_medtr : 105.0) Nodulation signaling pathway 2 protein - Medicago truncatula (Barrel medic) & (at5g17490 : 90.5) DELLA subfamily member involved in GA signal transduction; RGA-like protein 3 (RGL3); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative GRAS5, Description = GRAS5, PFAM = PF03514)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf03240_49836-55165' '(q8s4w7|gai1_vitvi : 384.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at3g03450 : 360.0) Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.; RGA-like 2 (RGL2); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2697 Blast hits to 2637 proteins in 314 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2690; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|67150 : 256.0) no description available & (reliability: 720.0) & (original description: Putative RGL, Description = ELLA domain GRAS family transcription factor, PFAM = PF03514)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf03473_87067-90529' '(gnl|cdd|67150 : 238.0) no description available & (q8s4w7|gai1_vitvi : 187.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at5g48150 : 185.0) Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway.; phytochrome a signal transduction 1 (PAT1); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 21 (TAIR:AT2G04890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative glysoja_024156, Description = DELLA protein GAI, PFAM = PF03514)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf03647_328334-331990' '(gnl|cdd|70010 : 237.0) no description available & (at3g54040 : 177.0) PAR1 protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PAR1 (InterPro:IPR009489); BEST Arabidopsis thaliana protein match is: PAR1 protein (TAIR:AT5G52390.1); Has 82 Blast hits to 82 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative BnaA04g04370D, Description = BnaA04g04370D protein, PFAM = PF06521)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf04185_9108-12610' '(q5ne24|nsp2_medtr : 214.0) Nodulation signaling pathway 2 protein - Medicago truncatula (Barrel medic) & (gnl|cdd|67150 : 206.0) no description available & (at4g08250 : 160.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2377 Blast hits to 2344 proteins in 299 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2375; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative glysoja_021752, Description = Nodulation-signaling pathway 2 protein, PFAM = PF03514)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf04260_260010-266756' '(at2g29120 : 736.0) member of Putative ligand-gated ion channel subunit family; glutamate receptor 2.7 (GLR2.7); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: vacuole; EXPRESSED IN: stem, cotyledon, leaf whorl, leaf, stamen; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 2.8 (TAIR:AT2G29110.1); Has 5217 Blast hits to 5121 proteins in 549 species: Archae - 76; Bacteria - 910; Metazoa - 3278; Fungi - 0; Plants - 643; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink). & (gnl|cdd|36270 : 425.0) no description available & (q7xp59|glr31_orysa : 373.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (gnl|cdd|84482 : 217.0) no description available & (reliability: 1472.0) & (original description: Putative GLR3, Description = Glutamate receptor, PFAM = PF00497;PF01094;PF00060)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf04260_367959-376960' '(at2g29120 : 756.0) member of Putative ligand-gated ion channel subunit family; glutamate receptor 2.7 (GLR2.7); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: vacuole; EXPRESSED IN: stem, cotyledon, leaf whorl, leaf, stamen; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 2.8 (TAIR:AT2G29110.1); Has 5217 Blast hits to 5121 proteins in 549 species: Archae - 76; Bacteria - 910; Metazoa - 3278; Fungi - 0; Plants - 643; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink). & (q7xp59|glr31_orysa : 411.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (gnl|cdd|36270 : 398.0) no description available & (gnl|cdd|84482 : 218.0) no description available & (reliability: 1512.0) & (original description: Putative GLR3, Description = Glutamate receptor, PFAM = PF01094;PF00060;PF00497)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf04322_50043-56519' '(at2g32400 : 870.0) Glr5; glutamate receptor 5 (GLR5); FUNCTIONS IN: protein binding, intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), GPCR, family 3, gamma-aminobutyric acid receptor, type B (InterPro:IPR002455), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 3.4 (TAIR:AT1G05200.2); Has 6965 Blast hits to 6802 proteins in 627 species: Archae - 64; Bacteria - 977; Metazoa - 4763; Fungi - 0; Plants - 634; Viruses - 0; Other Eukaryotes - 527 (source: NCBI BLink). & (q7xp59|glr31_orysa : 729.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (gnl|cdd|36270 : 379.0) no description available & (gnl|cdd|85237 : 206.0) no description available & (reliability: 1740.0) & (original description: Putative ACL1, Description = Glutamate receptor, PFAM = PF01094;PF00497;PF00060)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf04650_131255-136855' '(at4g16360 : 223.0) 5'-AMP-activated protein kinase beta-2 subunit protein; FUNCTIONS IN: AMP-activated protein kinase activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 5-AMP-activated protein kinase, beta subunit, interaction domain (InterPro:IPR006828); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase beta-2 subunit protein (TAIR:AT5G21170.1). & (gnl|cdd|36829 : 131.0) no description available & (gnl|cdd|30346 : 104.0) no description available & (reliability: 446.0) & (original description: Putative GAL83, Description = SNF1-related protein kinase regulatory subunit beta-1, PFAM = PF16561;PF04739)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf04819_437888-441625' '(gnl|cdd|67150 : 220.0) no description available & (q8s4w7|gai1_vitvi : 175.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 169.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative GRAS2, Description = GRAS family protein, PFAM = PF03514)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf05553_482896-643633' '(gnl|cdd|68252 : 444.0) no description available & (at4g08950 : 416.0) EXORDIUM (EXO); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to brassinosteroid stimulus; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: Phosphate-responsive 1 family protein (TAIR:AT1G35140.1); Has 398 Blast hits to 398 proteins in 24 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 832.0) & (original description: Putative EXO, Description = Protein EXORDIUM, PFAM = PF04674)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf05553_648291-651247' '(gnl|cdd|68252 : 440.0) no description available & (at4g08950 : 406.0) EXORDIUM (EXO); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to brassinosteroid stimulus; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: Phosphate-responsive 1 family protein (TAIR:AT1G35140.1); Has 398 Blast hits to 398 proteins in 24 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 812.0) & (original description: Putative EXL1, Description = Protein EXORDIUM-like 1, PFAM = PF04674)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf05811_197076-201009' '(gnl|cdd|70010 : 192.0) no description available & (at5g52390 : 157.0) PAR1 protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: PAR1 (InterPro:IPR009489); BEST Arabidopsis thaliana protein match is: PAR1 protein (TAIR:AT3G54040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative BnaA04g04370D, Description = BnaA04g04370D protein, PFAM = PF06521)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf05829_20159-24311' '(at5g55850 : 81.6) NOI protein; NOI; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to nitrate; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: RPM1-interacting protein 4 (RIN4) family protein (TAIR:AT2G04410.1). & (reliability: 163.2) & (original description: Putative At2g04410, Description = RPM1-interacting protein 4-like protein, PFAM = PF05627)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf05928_45031-49598' '(at3g01090 : 179.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase; SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02723|rkin1_secce : 148.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (reliability: 358.0) & (original description: Putative snrk1, Description = SNF1-related protein kinase, PFAM = PF02149)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf06026_16716-24330' '(at3g01090 : 652.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase; SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02723|rkin1_secce : 466.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (gnl|cdd|35803 : 314.0) no description available & (gnl|cdd|29142 : 273.0) no description available & (reliability: 1304.0) & (original description: Putative KIN10, Description = SNF1-related protein kinase catalytic subunit alpha KIN10, PFAM = PF00069;PF02149)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf06077_310507-316958' '(at3g51480 : 1074.0) member of Putative ligand-gated ion channel subunit family; glutamate receptor 3.6 (GLR3.6); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), GPCR, family 3, gamma-aminobutyric acid receptor, type B (InterPro:IPR002455), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 3.3 (TAIR:AT1G42540.1); Has 6142 Blast hits to 5992 proteins in 427 species: Archae - 49; Bacteria - 557; Metazoa - 4617; Fungi - 0; Plants - 640; Viruses - 0; Other Eukaryotes - 279 (source: NCBI BLink). & (q7xp59|glr31_orysa : 981.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (gnl|cdd|36270 : 434.0) no description available & (gnl|cdd|85237 : 236.0) no description available & (reliability: 2148.0) & (original description: Putative ACL1, Description = Glutamate receptor, PFAM = PF00060;PF00497;PF01094)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf07168_351763-363066' '(at4g15900 : 702.0) Mutations confer hypersensitivity to glucose and sucrose and augments sensitivity to cytokinin, ethylene, ABA and auxin. Encodes a nuclear WD40 protein that is imported into the nucleus. Essential for plant innate immunity. Interacts with MOS4 and AtCDC5. It is also predicted to have two DWD motifs. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase, and may affect the stability of AKIN10.; pleiotropic regulatory locus 1 (PRL1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G16650.1); Has 84704 Blast hits to 34179 proteins in 878 species: Archae - 64; Bacteria - 9610; Metazoa - 34201; Fungi - 18356; Plants - 10881; Viruses - 0; Other Eukaryotes - 11592 (source: NCBI BLink). & (gnl|cdd|35506 : 640.0) no description available & (gnl|cdd|29257 : 250.0) no description available & (p93107|pf20_chlre : 113.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1404.0) & (original description: Putative PRL1, Description = Protein pleiotropic regulatory locus 1, PFAM = PF00400;PF00400;PF00400;PF00400)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf08357_512110-520828' '(at3g01090 : 857.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase; SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02723|rkin1_secce : 658.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (gnl|cdd|35808 : 368.0) no description available & (gnl|cdd|29142 : 310.0) no description available & (reliability: 1714.0) & (original description: Putative KIN10, Description = SNF1-related protein kinase catalytic subunit alpha KIN10, PFAM = PF00627;PF00069;PF02149)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf08433_64199-67924' '(gnl|cdd|68252 : 352.0) no description available & (at5g64260 : 337.0) EXORDIUM like 2 (EXL2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: EXORDIUM like 4 (TAIR:AT5G09440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 674.0) & (original description: Putative BnaC02g00880D, Description = BnaC02g00880D protein, PFAM = PF04674)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf08564_112666-116179' '(at3g12890 : 119.0) Encodes a protein belonging to a class of CCT (CONSTANS, CONSTANS-like, TOC1) domain proteins. The protein contains a 43 amino acid-long sequence with high homology to the CCT domain but does not have any B-box or GATA-type zinc finger domains. Functions as a transcriptional activator and regulates the expression of at least a subset of sugar-inducible genes.; activator of spomin::LUC2 (ASML2); CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT5G41380.1); Has 1405 Blast hits to 1405 proteins in 99 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1344; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative PGSC0003DMG400022124, Description = CCT motif family protein, PFAM = PF06203)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf09178_133954-144083' '(at1g08490 : 667.0) Chloroplastic NifS-like protein that can catalyze the conversion of cysteine into alanine and elemental sulfur (S(0)) and of selenocysteine into alanine and elemental Se (Se(0)). Overexpression enhances selenium tolerance and accumulation.; chloroplastic NIFS-like cysteine desulfurase (CPNIFS); FUNCTIONS IN: transaminase activity, selenocysteine lyase activity, cysteine desulfurase activity; INVOLVED IN: iron incorporation into metallo-sulfur cluster, response to selenium ion, sulfur metabolic process, selenium metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Cysteine desulfurase, SufS (InterPro:IPR010970), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: nitrogen fixation S (NIFS)-like 1 (TAIR:AT5G65720.1); Has 22660 Blast hits to 22653 proteins in 2897 species: Archae - 350; Bacteria - 15408; Metazoa - 379; Fungi - 404; Plants - 268; Viruses - 1; Other Eukaryotes - 5850 (source: NCBI BLink). & (gnl|cdd|30866 : 476.0) no description available & (gnl|cdd|36762 : 287.0) no description available & (reliability: 1334.0) & (original description: Putative NFS2, Description = Cysteine desulfurase 1, chloroplastic, PFAM = PF00266)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf09740_82404-86435' '(gnl|cdd|70010 : 281.0) no description available & (at5g52390 : 200.0) PAR1 protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: PAR1 (InterPro:IPR009489); BEST Arabidopsis thaliana protein match is: PAR1 protein (TAIR:AT3G54040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 400.0) & (original description: Putative At5g52390, Description = PAR1 protein, PFAM = PF06521)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf12330_301416-316102' '(at4g16360 : 346.0) 5'-AMP-activated protein kinase beta-2 subunit protein; FUNCTIONS IN: AMP-activated protein kinase activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 5-AMP-activated protein kinase, beta subunit, interaction domain (InterPro:IPR006828); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase beta-2 subunit protein (TAIR:AT5G21170.1). & (gnl|cdd|36829 : 182.0) no description available & (gnl|cdd|30346 : 115.0) no description available & (reliability: 692.0) & (original description: Putative KINB2, Description = SNF1-related protein kinase regulatory subunit beta-2, PFAM = PF16561;PF04739)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf12885_330010-335517' '(at4g16360 : 230.0) 5'-AMP-activated protein kinase beta-2 subunit protein; FUNCTIONS IN: AMP-activated protein kinase activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 5-AMP-activated protein kinase, beta subunit, interaction domain (InterPro:IPR006828); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase beta-2 subunit protein (TAIR:AT5G21170.1). & (gnl|cdd|36829 : 121.0) no description available & (gnl|cdd|30346 : 96.8) no description available & (reliability: 460.0) & (original description: Putative KINB2, Description = SNF1-related protein kinase regulatory subunit beta-2, PFAM = PF16561;PF04739)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf17051_26903-39840' '(at3g01090 : 825.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase; SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02723|rkin1_secce : 635.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (gnl|cdd|35808 : 367.0) no description available & (gnl|cdd|29142 : 310.0) no description available & (reliability: 1650.0) & (original description: Putative SNF1, Description = SNF1, PFAM = PF00627;PF00069)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf27527_105256-108928' '(gnl|cdd|70010 : 260.0) no description available & (at3g54040 : 160.0) PAR1 protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PAR1 (InterPro:IPR009489); BEST Arabidopsis thaliana protein match is: PAR1 protein (TAIR:AT5G52390.1); Has 82 Blast hits to 82 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative BnaA04g04370D, Description = BnaA04g04370D protein, PFAM = PF06521)' T '30.1' 'signalling.in sugar and nutrient physiology' 'niben101scf36944_44910-47839' '(at5g64260 : 362.0) EXORDIUM like 2 (EXL2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: EXORDIUM like 4 (TAIR:AT5G09440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68252 : 359.0) no description available & (reliability: 724.0) & (original description: Putative EXL2, Description = Protein EXORDIUM-like 2, PFAM = PF04674)' T '30.1.1' 'signalling.in sugar and nutrient physiology' '' '' '30.1.2' 'signalling.in sugar and nutrient physiology.pyruvate dehydrogenase kinase' 'niben044scf00013968ctg008_19145-23144' '(at3g06483 : 594.0) Pyruvate dehydrogenase kinase (PDK) specifically phosphorylates the E1α subunit of the pyruvate dehydrogenase complex (PDC) on a Ser residue using ATP as a phosphate donor. PDK is a unique type of protein kinase having a His-kinase-like sequence but Ser-kinase activity. Site-directed mutagenesis and structural analysis indicate that PDK belongs to the GHKL superfamily.; pyruvate dehydrogenase kinase (PDK); FUNCTIONS IN: ATP binding, pyruvate dehydrogenase (acetyl-transferring) kinase activity, histidine phosphotransfer kinase activity; INVOLVED IN: signal transduction, peptidyl-histidine phosphorylation, phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, core (InterPro:IPR005467), Branched-chain alpha-ketoacid dehydrogenase kinase/Pyruvate dehydrogenase kinase, mitochondrial (InterPro:IPR018955), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); Has 1925 Blast hits to 1799 proteins in 531 species: Archae - 0; Bacteria - 712; Metazoa - 467; Fungi - 468; Plants - 102; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|36006 : 326.0) no description available & (reliability: 1188.0) & (original description: Putative PDK, Description = [Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial, PFAM = PF10436;PF02518)' T '30.1.2' 'signalling.in sugar and nutrient physiology.pyruvate dehydrogenase kinase' 'niben101scf01236_38325-44269' '(at3g06483 : 608.0) Pyruvate dehydrogenase kinase (PDK) specifically phosphorylates the E1α subunit of the pyruvate dehydrogenase complex (PDC) on a Ser residue using ATP as a phosphate donor. PDK is a unique type of protein kinase having a His-kinase-like sequence but Ser-kinase activity. Site-directed mutagenesis and structural analysis indicate that PDK belongs to the GHKL superfamily.; pyruvate dehydrogenase kinase (PDK); FUNCTIONS IN: ATP binding, pyruvate dehydrogenase (acetyl-transferring) kinase activity, histidine phosphotransfer kinase activity; INVOLVED IN: signal transduction, peptidyl-histidine phosphorylation, phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, core (InterPro:IPR005467), Branched-chain alpha-ketoacid dehydrogenase kinase/Pyruvate dehydrogenase kinase, mitochondrial (InterPro:IPR018955), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); Has 1925 Blast hits to 1799 proteins in 531 species: Archae - 0; Bacteria - 712; Metazoa - 467; Fungi - 468; Plants - 102; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|36006 : 322.0) no description available & (reliability: 1216.0) & (original description: Putative PDK, Description = [Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial, PFAM = PF10436;PF02518)' T '30.1.2' 'signalling.in sugar and nutrient physiology.pyruvate dehydrogenase kinase' 'niben101scf02517_28757-33659' '(at3g06483 : 595.0) Pyruvate dehydrogenase kinase (PDK) specifically phosphorylates the E1α subunit of the pyruvate dehydrogenase complex (PDC) on a Ser residue using ATP as a phosphate donor. PDK is a unique type of protein kinase having a His-kinase-like sequence but Ser-kinase activity. Site-directed mutagenesis and structural analysis indicate that PDK belongs to the GHKL superfamily.; pyruvate dehydrogenase kinase (PDK); FUNCTIONS IN: ATP binding, pyruvate dehydrogenase (acetyl-transferring) kinase activity, histidine phosphotransfer kinase activity; INVOLVED IN: signal transduction, peptidyl-histidine phosphorylation, phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, core (InterPro:IPR005467), Branched-chain alpha-ketoacid dehydrogenase kinase/Pyruvate dehydrogenase kinase, mitochondrial (InterPro:IPR018955), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); Has 1925 Blast hits to 1799 proteins in 531 species: Archae - 0; Bacteria - 712; Metazoa - 467; Fungi - 468; Plants - 102; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|36006 : 326.0) no description available & (reliability: 1190.0) & (original description: Putative PDK, Description = [Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial, PFAM = PF10436;PF02518)' T '30.2' 'signalling.receptor kinases' 'nbv0.3scaffold4356_57733-61948' '(at4g35470 : 590.0) Encodes PIRL4, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.; plant intracellular ras group-related LRR 4 (PIRL4); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 5 (TAIR:AT2G17440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35693 : 172.0) no description available & (p93194|rpk1_iponi : 84.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1180.0) & (original description: Putative PIRL4, Description = Plant intracellular Ras-group-related LRR protein 4, PFAM = PF13855;PF13855;PF13855)' T '30.2' 'signalling.receptor kinases' 'niben101scf02812_36255-40430' '(at4g35470 : 606.0) Encodes PIRL4, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.; plant intracellular ras group-related LRR 4 (PIRL4); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 5 (TAIR:AT2G17440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35693 : 175.0) no description available & (p93194|rpk1_iponi : 84.7) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|34495 : 83.9) no description available & (reliability: 1212.0) & (original description: Putative PIRL4, Description = Plant intracellular Ras-group-related LRR protein 4, PFAM = PF13855;PF13855)' T '30.2' 'signalling.receptor kinases' 'niben101scf06822_76960-81968' '(at4g35470 : 386.0) Encodes PIRL4, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.; plant intracellular ras group-related LRR 4 (PIRL4); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 5 (TAIR:AT2G17440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35693 : 146.0) no description available & (gnl|cdd|34495 : 87.7) no description available & (reliability: 772.0) & (original description: Putative IRL5, Description = Plant intracellular Ras-group-related LRR protein 5, PFAM = PF13855;PF13855)' T '30.2' 'signalling.receptor kinases' 'niben101scf07027_418039-422278' '(at4g35470 : 583.0) Encodes PIRL4, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.; plant intracellular ras group-related LRR 4 (PIRL4); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 5 (TAIR:AT2G17440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35693 : 166.0) no description available & (gnl|cdd|34495 : 88.5) no description available & (p93194|rpk1_iponi : 81.3) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1166.0) & (original description: Putative PIRL4, Description = Plant intracellular Ras-group-related LRR protein 4, PFAM = PF00560;PF13855;PF13855)' T '30.2.1' 'signalling.receptor kinases.leucine rich repeat I' 'nbv0.3scaffold352_126087-131728' '(gnl|cdd|36401 : 167.0) no description available & (at1g24030 : 117.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 120365 Blast hits to 119013 proteins in 4490 species: Archae - 114; Bacteria - 14164; Metazoa - 43937; Fungi - 10244; Plants - 33641; Viruses - 447; Other Eukaryotes - 17818 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 103.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 86.0) no description available & (reliability: 228.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF07714;PF00069)' T '30.2.1' 'signalling.receptor kinases.leucine rich repeat I' 'nbv0.3scaffold3282_65793-74766' '(q8l4h4|nork_medtr : 842.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|36401 : 350.0) no description available & (at2g29000 : 326.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G28960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|87344 : 159.0) no description available & (reliability: 594.0) & (original description: Putative NORK, Description = Nodulation receptor kinase, PFAM = PF07714;PF12819)' T '30.2.1' 'signalling.receptor kinases.leucine rich repeat I' 'nbv0.3scaffold21492_24309-31730' '(gnl|cdd|36401 : 145.0) no description available & (at1g11050 : 116.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor-like kinase in in flowers 3 (TAIR:AT2G48010.1); Has 115297 Blast hits to 114175 proteins in 4324 species: Archae - 104; Bacteria - 13350; Metazoa - 42303; Fungi - 9816; Plants - 32853; Viruses - 335; Other Eukaryotes - 16536 (source: NCBI BLink). & (gnl|cdd|29142 : 107.0) no description available & (o24585|cri4_maize : 89.7) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 224.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF00069)' T '30.2.1' 'signalling.receptor kinases.leucine rich repeat I' 'nbv0.5scaffold5676_1746-7341' '(at4g29990 : 291.0) Leucine-rich repeat transmembrane protein kinase protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, leaf whorl, root; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: FLG22-induced receptor-like kinase 1 (TAIR:AT2G19190.1); Has 171907 Blast hits to 132045 proteins in 5043 species: Archae - 136; Bacteria - 15038; Metazoa - 48082; Fungi - 11262; Plants - 76060; Viruses - 464; Other Eukaryotes - 20865 (source: NCBI BLink). & (q8l4h4|nork_medtr : 85.5) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 582.0) & (original description: Putative Os05g0525400, Description = Os05g0525400 protein, PFAM = PF12819)' T '30.2.1' 'signalling.receptor kinases.leucine rich repeat I' 'niben044scf00005698ctg028_1888-7707' '(gnl|cdd|36401 : 167.0) no description available & (at1g24030 : 117.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 120365 Blast hits to 119013 proteins in 4490 species: Archae - 114; Bacteria - 14164; Metazoa - 43937; Fungi - 10244; Plants - 33641; Viruses - 447; Other Eukaryotes - 17818 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 105.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47550 : 87.6) no description available & (reliability: 230.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF07714;PF00069)' T '30.2.1' 'signalling.receptor kinases.leucine rich repeat I' 'niben044scf00006992ctg005_21987-23509' '(at5g54590 : 93.2) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G15730.2); Has 122839 Blast hits to 121076 proteins in 4427 species: Archae - 107; Bacteria - 13574; Metazoa - 46062; Fungi - 10515; Plants - 33930; Viruses - 482; Other Eukaryotes - 18169 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative CRLK1, Description = Putative LRR receptor-like serine/threonine-protein kinase At5g48740 family, PFAM = )' T '30.2.1' 'signalling.receptor kinases.leucine rich repeat I' 'niben044scf00006992ctg006_1-6342' '(at5g54590 : 519.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G15730.2); Has 122839 Blast hits to 121076 proteins in 4427 species: Archae - 107; Bacteria - 13574; Metazoa - 46062; Fungi - 10515; Plants - 33930; Viruses - 482; Other Eukaryotes - 18169 (source: NCBI BLink). & (gnl|cdd|36401 : 280.0) no description available & (q8l4h4|nork_medtr : 208.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 176.0) no description available & (reliability: 1038.0) & (original description: Putative Os06g0283300, Description = Os06g0283300 protein, PFAM = PF07714)' T '30.2.1' 'signalling.receptor kinases.leucine rich repeat I' 'niben044scf00038168ctg005_1-11585' '(at2g37050 : 1238.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G67720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8lkz1|nork_pea : 386.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|36401 : 349.0) no description available & (gnl|cdd|47549 : 169.0) no description available & (reliability: 2476.0) & (original description: Putative At1g67720, Description = Probable LRR receptor-like serine/threonine-protein kinase At1g67720, PFAM = PF00069;PF13855;PF12819)' T '30.2.1' 'signalling.receptor kinases.leucine rich repeat I' 'niben101scf00177_911277-919523' '(gnl|cdd|36401 : 267.0) no description available & (at5g40380 : 194.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (CRK42); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (TAIR:AT1G70530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29142 : 172.0) no description available & (o24585|cri4_maize : 158.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 370.0) & (original description: Putative Sb08g000610, Description = Putative uncharacterized protein Sb08g000610, PFAM = PF00069)' T '30.2.1' 'signalling.receptor kinases.leucine rich repeat I' 'niben101scf00858_177201-185451' '(at5g54590 : 603.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G15730.2); Has 122839 Blast hits to 121076 proteins in 4427 species: Archae - 107; Bacteria - 13574; Metazoa - 46062; Fungi - 10515; Plants - 33930; Viruses - 482; Other Eukaryotes - 18169 (source: NCBI BLink). & (gnl|cdd|36401 : 324.0) no description available & (q8l4h4|nork_medtr : 223.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 186.0) no description available & (reliability: 1206.0) & (original description: Putative CRLK1, Description = Calcium/calmodulin-regulated receptor-like kinase 1, PFAM = PF07714)' T '30.2.1' 'signalling.receptor kinases.leucine rich repeat I' 'niben101scf01018_258130-264984' '(at5g48740 : 1107.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G67720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8lkz1|nork_pea : 382.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|36401 : 337.0) no description available & (gnl|cdd|29142 : 175.0) no description available & (reliability: 2214.0) & (original description: Putative At5g48740, Description = Probable LRR receptor-like serine/threonine-protein kinase At5g48740, PFAM = PF12819;PF13855;PF00069)' T '30.2.1' 'signalling.receptor kinases.leucine rich repeat I' 'niben101scf01477_4451-13752' '(q8lkz1|nork_pea : 891.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (at1g67720 : 365.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G37050.3); Has 172111 Blast hits to 130582 proteins in 4641 species: Archae - 151; Bacteria - 14946; Metazoa - 47791; Fungi - 11011; Plants - 76783; Viruses - 518; Other Eukaryotes - 20911 (source: NCBI BLink). & (gnl|cdd|36401 : 352.0) no description available & (gnl|cdd|87344 : 159.0) no description available & (reliability: 700.0) & (original description: Putative NORK, Description = Nodulation receptor kinase, PFAM = PF12819;PF07714)' T '30.2.1' 'signalling.receptor kinases.leucine rich repeat I' 'niben101scf02738_820933-826763' '(at5g15730 : 516.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G54590.2); Has 117437 Blast hits to 116208 proteins in 4662 species: Archae - 111; Bacteria - 12502; Metazoa - 44353; Fungi - 9876; Plants - 32963; Viruses - 432; Other Eukaryotes - 17200 (source: NCBI BLink). & (gnl|cdd|36401 : 306.0) no description available & (q8lkz1|nork_pea : 211.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 188.0) no description available & (reliability: 1032.0) & (original description: Putative CRLK2, Description = Calcium/calmodulin-regulated receptor-like kinase 2, PFAM = PF07714)' T '30.2.1' 'signalling.receptor kinases.leucine rich repeat I' 'niben101scf03534_51831-55923' '(gnl|cdd|36401 : 273.0) no description available & (at4g02010 : 199.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G20300.1); Has 117558 Blast hits to 116281 proteins in 4412 species: Archae - 107; Bacteria - 13740; Metazoa - 43399; Fungi - 9953; Plants - 33036; Viruses - 373; Other Eukaryotes - 16950 (source: NCBI BLink). & (q8l4h4|nork_medtr : 191.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47550 : 155.0) no description available & (reliability: 388.0) & (original description: Putative pto, Description = Putative receptor-like protein kinase, PFAM = PF00069)' T '30.2.1' 'signalling.receptor kinases.leucine rich repeat I' 'niben101scf04207_150615-170393' '(at2g37050 : 1251.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G67720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8lkz1|nork_pea : 390.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|36401 : 359.0) no description available & (gnl|cdd|47549 : 176.0) no description available & (reliability: 2502.0) & (original description: Putative BnaA05g07360D, Description = BnaA05g07360D protein, PFAM = PF12819;PF07714;PF13855)' T '30.2.1' 'signalling.receptor kinases.leucine rich repeat I' 'niben101scf11560_20679-24959' '(gnl|cdd|36401 : 335.0) no description available & (at5g54380 : 253.0) Encodes THESEUS1 (THE1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth.; THESEUS1 (THE1); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: hercules receptor kinase 1 (TAIR:AT3G46290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8l4h4|nork_medtr : 232.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 154.0) no description available & (reliability: 478.0) & (original description: Putative ANX1, Description = Receptor-like protein kinase THESEUS 1, PFAM = PF00069)' T '30.2.1' 'signalling.receptor kinases.leucine rich repeat I' 'niben101scf15393_79571-83083' '(at4g29990 : 306.0) Leucine-rich repeat transmembrane protein kinase protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, leaf whorl, root; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: FLG22-induced receptor-like kinase 1 (TAIR:AT2G19190.1); Has 171907 Blast hits to 132045 proteins in 5043 species: Archae - 136; Bacteria - 15038; Metazoa - 48082; Fungi - 11262; Plants - 76060; Viruses - 464; Other Eukaryotes - 20865 (source: NCBI BLink). & (q8lkz1|nork_pea : 82.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 612.0) & (original description: Putative Os05g0525400, Description = Os05g0525400 protein, PFAM = PF12819)' T '30.2.1' 'signalling.receptor kinases.leucine rich repeat I' 'niben101scf25583_29642-32505' '(at5g15730 : 144.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G54590.2); Has 117437 Blast hits to 116208 proteins in 4662 species: Archae - 111; Bacteria - 12502; Metazoa - 44353; Fungi - 9876; Plants - 32963; Viruses - 432; Other Eukaryotes - 17200 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative CRLK1, Description = Putative leucine-rich repeat receptor-like serine/threonine-protein kinase, PFAM = )' T '30.2.2' 'signalling.receptor kinases.leucine rich repeat II' 'nbv0.3scaffold4422_59217-68778' '(at4g33430 : 910.0) Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1 and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome.; BRI1-associated receptor kinase (BAK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: somatic embryogenesis receptor-like kinase 4 (TAIR:AT2G13790.1). & (gnl|cdd|36401 : 354.0) no description available & (q8lkz1|nork_pea : 236.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 168.0) no description available & (reliability: 1680.0) & (original description: Putative BAK1, Description = BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, PFAM = PF08263;PF00069)' T '30.2.2' 'signalling.receptor kinases.leucine rich repeat II' 'nbv0.5scaffold568_382080-388656' '(at1g60800 : 898.0) NSP-interacting kinase 3 (NIK3); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NSP-interacting kinase 2 (TAIR:AT3G25560.1); Has 179068 Blast hits to 122128 proteins in 4509 species: Archae - 118; Bacteria - 15693; Metazoa - 45449; Fungi - 8996; Plants - 88569; Viruses - 414; Other Eukaryotes - 19829 (source: NCBI BLink). & (gnl|cdd|36401 : 345.0) no description available & (q8lpb4|pskr_dauca : 237.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 164.0) no description available & (reliability: 1796.0) & (original description: Putative NIK3, Description = Protein NSP-INTERACTING KINASE 3, PFAM = PF08263;PF00069;PF13855)' T '30.2.2' 'signalling.receptor kinases.leucine rich repeat II' 'nbv0.5scaffold6679_88103-93216' '(at5g45780 : 576.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NSP-interacting kinase 3 (TAIR:AT1G60800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 336.0) no description available & (q8lpb4|pskr_dauca : 224.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 164.0) no description available & (reliability: 1152.0) & (original description: Putative BAK1, Description = BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, putative, PFAM = PF00069)' T '30.2.2' 'signalling.receptor kinases.leucine rich repeat II' 'niben044scf00003411ctg012_2079-5953' '(at4g33430 : 117.0) Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1 and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome.; BRI1-associated receptor kinase (BAK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: somatic embryogenesis receptor-like kinase 4 (TAIR:AT2G13790.1). & (reliability: 226.0) & (original description: Putative lrr1, Description = BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, PFAM = PF08263)' T '30.2.2' 'signalling.receptor kinases.leucine rich repeat II' 'niben044scf00004528ctg003_5870-13809' '(at1g34210 : 1014.0) Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production.; somatic embryogenesis receptor-like kinase 2 (SERK2); FUNCTIONS IN: kinase activity; INVOLVED IN: pollen maturation, microsporogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: somatic embryogenesis receptor-like kinase 1 (TAIR:AT1G71830.1); Has 175230 Blast hits to 121098 proteins in 4288 species: Archae - 125; Bacteria - 16192; Metazoa - 44525; Fungi - 8981; Plants - 85819; Viruses - 391; Other Eukaryotes - 19197 (source: NCBI BLink). & (gnl|cdd|36401 : 354.0) no description available & (q8lpb4|pskr_dauca : 230.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 168.0) no description available & (reliability: 2028.0) & (original description: Putative SERK1, Description = Somatic embryogenesis receptor kinase 1, PFAM = PF08263;PF00069;PF12799)' T '30.2.2' 'signalling.receptor kinases.leucine rich repeat II' 'niben044scf00025463ctg015_19802-29342' '(at5g63710 : 758.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT5G10290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 333.0) no description available & (q8lpb4|pskr_dauca : 258.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|88314 : 163.0) no description available & (reliability: 1516.0) & (original description: Putative serk, Description = BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, PFAM = PF07714;PF13855;PF08263)' T '30.2.2' 'signalling.receptor kinases.leucine rich repeat II' 'niben044scf00027370ctg010_11682-19121' '(at5g10290 : 883.0) leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G65240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 339.0) no description available & (q8lpb4|pskr_dauca : 266.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|88314 : 160.0) no description available & (reliability: 1766.0) & (original description: Putative serk, Description = BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, PFAM = PF13855;PF08263;PF00069)' T '30.2.2' 'signalling.receptor kinases.leucine rich repeat II' 'niben101scf00140_290377-299538' '(at5g10290 : 855.0) leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G65240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 345.0) no description available & (q8lpb4|pskr_dauca : 265.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|88314 : 161.0) no description available & (reliability: 1710.0) & (original description: Putative serk, Description = BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, PFAM = PF00069;PF00560;PF08263)' T '30.2.2' 'signalling.receptor kinases.leucine rich repeat II' 'niben101scf00244_453054-456049' '(at5g10290 : 129.0) leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G65240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative upk, Description = BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, PFAM = PF12799)' T '30.2.2' 'signalling.receptor kinases.leucine rich repeat II' 'niben101scf00821_1610345-1613765' '(at1g71830 : 183.0) Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production. later; somatic embryogenesis receptor-like kinase 1 (SERK1); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: plasma membrane, protein complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: somatic embryogenesis receptor-like kinase 2 (TAIR:AT1G34210.1); Has 181670 Blast hits to 121787 proteins in 4268 species: Archae - 123; Bacteria - 18224; Metazoa - 45784; Fungi - 8994; Plants - 88758; Viruses - 411; Other Eukaryotes - 19376 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative lrr1, Description = Putative somatic embryogenesis receptor kinase leucine-rich repeat protein 1, PFAM = PF08263;PF13855)' T '30.2.2' 'signalling.receptor kinases.leucine rich repeat II' 'niben101scf00941_198457-207153' '(at1g34210 : 1014.0) Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production.; somatic embryogenesis receptor-like kinase 2 (SERK2); FUNCTIONS IN: kinase activity; INVOLVED IN: pollen maturation, microsporogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: somatic embryogenesis receptor-like kinase 1 (TAIR:AT1G71830.1); Has 175230 Blast hits to 121098 proteins in 4288 species: Archae - 125; Bacteria - 16192; Metazoa - 44525; Fungi - 8981; Plants - 85819; Viruses - 391; Other Eukaryotes - 19197 (source: NCBI BLink). & (gnl|cdd|36401 : 354.0) no description available & (q8lpb4|pskr_dauca : 230.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 168.0) no description available & (reliability: 2028.0) & (original description: Putative SERK1, Description = Somatic embryogenesis receptor kinase 1, PFAM = PF00069;PF08263;PF12799)' T '30.2.2' 'signalling.receptor kinases.leucine rich repeat II' 'niben101scf01594_723117-732651' '(at5g63710 : 775.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT5G10290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 333.0) no description available & (q8lpb4|pskr_dauca : 253.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|88314 : 163.0) no description available & (reliability: 1550.0) & (original description: Putative serk, Description = BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, PFAM = PF07714;PF13855;PF08263)' T '30.2.2' 'signalling.receptor kinases.leucine rich repeat II' 'niben101scf01742_657209-665024' '(at1g60800 : 847.0) NSP-interacting kinase 3 (NIK3); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NSP-interacting kinase 2 (TAIR:AT3G25560.1); Has 179068 Blast hits to 122128 proteins in 4509 species: Archae - 118; Bacteria - 15693; Metazoa - 45449; Fungi - 8996; Plants - 88569; Viruses - 414; Other Eukaryotes - 19829 (source: NCBI BLink). & (gnl|cdd|36401 : 338.0) no description available & (q8lpb4|pskr_dauca : 257.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 162.0) no description available & (reliability: 1694.0) & (original description: Putative NIK3, Description = Protein NSP-INTERACTING KINASE 3, PFAM = PF08263;PF13855;PF00069)' T '30.2.2' 'signalling.receptor kinases.leucine rich repeat II' 'niben101scf02513_1212351-1225639' '(at4g33430 : 922.0) Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1 and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome.; BRI1-associated receptor kinase (BAK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: somatic embryogenesis receptor-like kinase 4 (TAIR:AT2G13790.1). & (gnl|cdd|36401 : 355.0) no description available & (q8lpb4|pskr_dauca : 234.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 161.0) no description available & (reliability: 1714.0) & (original description: Putative SERK2, Description = Somatic embryogenesis receptor kinase 2, PFAM = PF08263;PF00069)' T '30.2.2' 'signalling.receptor kinases.leucine rich repeat II' 'niben101scf02531_148016-154494' '(at5g45780 : 742.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NSP-interacting kinase 3 (TAIR:AT1G60800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 334.0) no description available & (q8lpb4|pskr_dauca : 238.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 163.0) no description available & (reliability: 1484.0) & (original description: Putative serk, Description = Protein NSP-INTERACTING KINASE 1, PFAM = PF00069;PF08263)' T '30.2.2' 'signalling.receptor kinases.leucine rich repeat II' 'niben101scf02738_341949-347134' '(at5g16000 : 956.0) NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP).; NSP-interacting kinase 1 (NIK1); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NSP-interacting kinase 2 (TAIR:AT3G25560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 335.0) no description available & (q8lpb4|pskr_dauca : 283.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 161.0) no description available & (reliability: 1912.0) & (original description: Putative NIK1, Description = Protein NSP-INTERACTING KINASE 1, PFAM = PF13855;PF00069;PF08263)' T '30.2.2' 'signalling.receptor kinases.leucine rich repeat II' 'niben101scf03045_816860-823676' '(at1g60800 : 907.0) NSP-interacting kinase 3 (NIK3); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NSP-interacting kinase 2 (TAIR:AT3G25560.1); Has 179068 Blast hits to 122128 proteins in 4509 species: Archae - 118; Bacteria - 15693; Metazoa - 45449; Fungi - 8996; Plants - 88569; Viruses - 414; Other Eukaryotes - 19829 (source: NCBI BLink). & (gnl|cdd|36401 : 344.0) no description available & (q8l4h4|nork_medtr : 232.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 165.0) no description available & (reliability: 1814.0) & (original description: Putative NIK3, Description = Protein NSP-INTERACTING KINASE 3, PFAM = PF13855;PF00069;PF08263)' T '30.2.2' 'signalling.receptor kinases.leucine rich repeat II' 'niben101scf04375_1032287-1086884' '(at5g63710 : 758.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT5G10290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 336.0) no description available & (q8lpb4|pskr_dauca : 259.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 163.0) no description available & (reliability: 1516.0) & (original description: Putative serk, Description = BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, PFAM = PF08263;PF00560;PF00069)' T '30.2.2' 'signalling.receptor kinases.leucine rich repeat II' 'niben101scf04709_121031-131179' '(at5g10290 : 860.0) leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G65240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 338.0) no description available & (q8lpb4|pskr_dauca : 267.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|88314 : 160.0) no description available & (reliability: 1720.0) & (original description: Putative serk, Description = BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, PFAM = PF13855;PF00069;PF08263)' T '30.2.2' 'signalling.receptor kinases.leucine rich repeat II' 'niben101scf07695_195551-203380' '(at2g23950 : 876.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT4G30520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 339.0) no description available & (q8lpb4|pskr_dauca : 285.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 163.0) no description available & (reliability: 1752.0) & (original description: Putative rk1, Description = Protein NSP-INTERACTING KINASE 1, PFAM = PF08263;PF00069)' T '30.2.2' 'signalling.receptor kinases.leucine rich repeat II' 'niben101scf09409_166531-173165' '(at5g16000 : 915.0) NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP).; NSP-interacting kinase 1 (NIK1); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NSP-interacting kinase 2 (TAIR:AT3G25560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 337.0) no description available & (q8lpb4|pskr_dauca : 271.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 161.0) no description available & (reliability: 1830.0) & (original description: Putative NIK2, Description = Protein NSP-INTERACTING KINASE 2, PFAM = PF08263;PF00069;PF13855)' T '30.2.2' 'signalling.receptor kinases.leucine rich repeat II' 'niben101scf11779_215448-227040' '(at4g33430 : 934.0) Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1 and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome.; BRI1-associated receptor kinase (BAK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: somatic embryogenesis receptor-like kinase 4 (TAIR:AT2G13790.1). & (gnl|cdd|36401 : 353.0) no description available & (q8lkz1|nork_pea : 236.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 170.0) no description available & (reliability: 1760.0) & (original description: Putative BAK1, Description = BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, PFAM = PF00069;PF08263)' T '30.2.2' 'signalling.receptor kinases.leucine rich repeat II' 'niben101scf12866_138509-144716' '(at5g45780 : 734.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NSP-interacting kinase 3 (TAIR:AT1G60800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 335.0) no description available & (q8lpb4|pskr_dauca : 247.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 165.0) no description available & (reliability: 1468.0) & (original description: Putative serk, Description = Protein NSP-INTERACTING KINASE 1, PFAM = PF08263;PF00069)' T '30.2.2' 'signalling.receptor kinases.leucine rich repeat II' 'niben101scf16106_97555-102892' '(at5g16000 : 926.0) NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP).; NSP-interacting kinase 1 (NIK1); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NSP-interacting kinase 2 (TAIR:AT3G25560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 336.0) no description available & (q8lpb4|pskr_dauca : 280.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 160.0) no description available & (reliability: 1852.0) & (original description: Putative NIK1, Description = Protein NSP-INTERACTING KINASE 1, PFAM = PF08263;PF00069)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'nbv0.3scaffold7811_29874-34119' '(at2g26730 : 182.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G58300.2); Has 147963 Blast hits to 108487 proteins in 3857 species: Archae - 104; Bacteria - 12149; Metazoa - 40706; Fungi - 7620; Plants - 70847; Viruses - 383; Other Eukaryotes - 16154 (source: NCBI BLink). & (gnl|cdd|36401 : 181.0) no description available & (q8lpb4|pskr_dauca : 112.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 101.0) no description available & (reliability: 364.0) & (original description: Putative glysoja_045931, Description = Putative inactive receptor kinase, PFAM = PF07714;PF08263)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'nbv0.3scaffold9187_23553-29735' '(at2g26730 : 249.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G58300.2); Has 147963 Blast hits to 108487 proteins in 3857 species: Archae - 104; Bacteria - 12149; Metazoa - 40706; Fungi - 7620; Plants - 70847; Viruses - 383; Other Eukaryotes - 16154 (source: NCBI BLink). & (gnl|cdd|36401 : 210.0) no description available & (q8lpb4|pskr_dauca : 152.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 135.0) no description available & (reliability: 498.0) & (original description: Putative PGSC0003DMG400012588, Description = Putative inactive receptor kinase, PFAM = PF00069;PF08263)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'nbv0.3scaffold9187_23616-29774' '(at2g26730 : 247.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G58300.2); Has 147963 Blast hits to 108487 proteins in 3857 species: Archae - 104; Bacteria - 12149; Metazoa - 40706; Fungi - 7620; Plants - 70847; Viruses - 383; Other Eukaryotes - 16154 (source: NCBI BLink). & (gnl|cdd|36401 : 210.0) no description available & (q8lpb4|pskr_dauca : 151.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 136.0) no description available & (reliability: 494.0) & (original description: Putative glysoja_005561, Description = Putative inactive receptor kinase, PFAM = PF00069;PF08263)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'nbv0.3scaffold19862_20170-25161' '(at5g43020 : 662.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G67200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 198.0) no description available & (q8lpb4|pskr_dauca : 137.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 135.0) no description available & (reliability: 1324.0) & (original description: Putative At5g67200, Description = Probable inactive receptor kinase At5g67200, PFAM = PF07714;PF13855)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'nbv0.3scaffold25487_11273-17013' '(at5g35390 : 517.0) Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis.; Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: apical plasma membrane, apical part of cell; EXPRESSED IN: sepal, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G07040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 191.0) no description available & (q8lpb4|pskr_dauca : 172.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 111.0) no description available & (reliability: 1034.0) & (original description: Putative PRK1, Description = Pollen receptor-like kinase 1, PFAM = PF00069;PF13855)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'nbv0.3scaffold27741_13454-19027' '(at4g20940 : 908.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: signal transduction, N-terminal protein myristoylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G10020.1); Has 124696 Blast hits to 48167 proteins in 1508 species: Archae - 53; Bacteria - 7002; Metazoa - 34401; Fungi - 1693; Plants - 72944; Viruses - 23; Other Eukaryotes - 8580 (source: NCBI BLink). & (gnl|cdd|36401 : 211.0) no description available & (p93194|rpk1_iponi : 157.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|47549 : 116.0) no description available & (reliability: 1816.0) & (original description: Putative At4g20940, Description = Probable LRR receptor-like serine/threonine-protein kinase At4g20940, PFAM = PF07714;PF00560;PF13516;PF13516;PF13855;PF13855;PF08263)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'nbv0.3scaffold55322_3791-8572' '(at1g48480 : 632.0) Arabidopsis thaliana receptor-like protein kinase (RKL1) gene; receptor-like kinase 1 (RKL1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: receptor-like kinase 902 (TAIR:AT3G17840.1); Has 150712 Blast hits to 111636 proteins in 3789 species: Archae - 114; Bacteria - 11711; Metazoa - 42617; Fungi - 8101; Plants - 71209; Viruses - 324; Other Eukaryotes - 16636 (source: NCBI BLink). & (gnl|cdd|36401 : 242.0) no description available & (q8lpb4|pskr_dauca : 178.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 146.0) no description available & (reliability: 1264.0) & (original description: Putative RKL1, Description = Probable inactive receptor kinase At1g48480, PFAM = PF00069;PF08263)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'nbv0.3scaffold64326_2349-7600' '(at3g24660 : 815.0) member of Receptor kinase-like protein family; transmembrane kinase-like 1 (TMKL1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: inflorescence meristem receptor-like kinase 2 (TAIR:AT3G51740.1); Has 102882 Blast hits to 72978 proteins in 2721 species: Archae - 76; Bacteria - 8021; Metazoa - 22133; Fungi - 3923; Plants - 58593; Viruses - 201; Other Eukaryotes - 9935 (source: NCBI BLink). & (gnl|cdd|36401 : 208.0) no description available & (q8lpb4|pskr_dauca : 115.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|88314 : 109.0) no description available & (reliability: 1630.0) & (original description: Putative TMKL1, Description = Putative kinase-like protein TMKL1, PFAM = PF07714)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'nbv0.3scaffold64899_1-4564' '(at3g42880 : 537.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G20690.1); Has 99886 Blast hits to 64132 proteins in 3251 species: Archae - 77; Bacteria - 7250; Metazoa - 18347; Fungi - 2712; Plants - 63147; Viruses - 166; Other Eukaryotes - 8187 (source: NCBI BLink). & (gnl|cdd|36401 : 206.0) no description available & (q8lpb4|pskr_dauca : 194.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 118.0) no description available & (reliability: 1074.0) & (original description: Putative PRK3, Description = Pollen receptor-like kinase 3, PFAM = PF00069;PF08263;PF00560)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'nbv0.3scaffold71992_1781-7555' '(at4g23740 : 678.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G64210.1); Has 133447 Blast hits to 93425 proteins in 3201 species: Archae - 108; Bacteria - 9755; Metazoa - 33158; Fungi - 5971; Plants - 69957; Viruses - 278; Other Eukaryotes - 14220 (source: NCBI BLink). & (gnl|cdd|36401 : 219.0) no description available & (q8lpb4|pskr_dauca : 158.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|88314 : 120.0) no description available & (reliability: 1356.0) & (original description: Putative At4g23740, Description = Probable inactive receptor kinase At4g23740, PFAM = PF08263;PF00560;PF00560;PF00069)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'nbv0.5scaffold152_86279-93791' '(at3g57830 : 581.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G42290.1); Has 115878 Blast hits to 74055 proteins in 2436 species: Archae - 82; Bacteria - 7967; Metazoa - 22555; Fungi - 3788; Plants - 70683; Viruses - 150; Other Eukaryotes - 10653 (source: NCBI BLink). & (gnl|cdd|36401 : 211.0) no description available & (p93194|rpk1_iponi : 139.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|87344 : 131.0) no description available & (reliability: 1162.0) & (original description: Putative BnaA09g37080D, Description = BnaA09g37080D protein, PFAM = PF13855;PF08263;PF07714)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'nbv0.5scaffold713_560691-566074' '(at1g48480 : 576.0) Arabidopsis thaliana receptor-like protein kinase (RKL1) gene; receptor-like kinase 1 (RKL1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: receptor-like kinase 902 (TAIR:AT3G17840.1); Has 150712 Blast hits to 111636 proteins in 3789 species: Archae - 114; Bacteria - 11711; Metazoa - 42617; Fungi - 8101; Plants - 71209; Viruses - 324; Other Eukaryotes - 16636 (source: NCBI BLink). & (gnl|cdd|36401 : 243.0) no description available & (q8lpb4|pskr_dauca : 160.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 141.0) no description available & (reliability: 1152.0) & (original description: Putative RKL1, Description = Probable inactive receptor kinase At1g48480, PFAM = PF13855;PF08263;PF00069)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'nbv0.5scaffold1010_324337-328112' '(at4g20940 : 522.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: signal transduction, N-terminal protein myristoylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G10020.1); Has 124696 Blast hits to 48167 proteins in 1508 species: Archae - 53; Bacteria - 7002; Metazoa - 34401; Fungi - 1693; Plants - 72944; Viruses - 23; Other Eukaryotes - 8580 (source: NCBI BLink). & (p93194|rpk1_iponi : 131.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 100.0) no description available & (reliability: 1044.0) & (original description: Putative At4g20940, Description = Leucine-rich repeat family protein, PFAM = PF08263;PF13516;PF13516;PF00560)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'nbv0.5scaffold1389_187650-193871' '(at2g26730 : 249.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G58300.2); Has 147963 Blast hits to 108487 proteins in 3857 species: Archae - 104; Bacteria - 12149; Metazoa - 40706; Fungi - 7620; Plants - 70847; Viruses - 383; Other Eukaryotes - 16154 (source: NCBI BLink). & (gnl|cdd|36401 : 210.0) no description available & (q8lpb4|pskr_dauca : 152.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 135.0) no description available & (reliability: 498.0) & (original description: Putative glysoja_005561, Description = Putative inactive receptor kinase, PFAM = PF00069;PF08263)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'nbv0.5scaffold2250_282739-288257' '(at1g68400 : 261.0) leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G26730.1); Has 160938 Blast hits to 120966 proteins in 4540 species: Archae - 117; Bacteria - 17746; Metazoa - 43976; Fungi - 9280; Plants - 71738; Viruses - 378; Other Eukaryotes - 17703 (source: NCBI BLink). & (gnl|cdd|36401 : 198.0) no description available & (q8lkz1|nork_pea : 126.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 102.0) no description available & (reliability: 522.0) & (original description: Putative PXC1, Description = Putative inactive receptor kinase, PFAM = PF13855;PF08263;PF07714)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'nbv0.5scaffold2508_223475-230835' '(at5g35390 : 561.0) Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis.; Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: apical plasma membrane, apical part of cell; EXPRESSED IN: sepal, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G07040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 195.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 189.0) no description available & (gnl|cdd|84488 : 112.0) no description available & (reliability: 1122.0) & (original description: Putative At4g31250, Description = Probable LRR receptor-like serine/threonine-protein kinase At4g31250, PFAM = PF13855;PF00069;PF08263)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'nbv0.5scaffold3090_227284-231890' '(at2g36570 : 557.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT1G68400.1); Has 135980 Blast hits to 106098 proteins in 4276 species: Archae - 124; Bacteria - 13214; Metazoa - 37456; Fungi - 7266; Plants - 62446; Viruses - 283; Other Eukaryotes - 15191 (source: NCBI BLink). & (gnl|cdd|36401 : 257.0) no description available & (q8lpb4|pskr_dauca : 179.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|88314 : 147.0) no description available & (reliability: 1114.0) & (original description: Putative PXC1, Description = Leucine-rich repeat receptor-like protein kinase PXC1, PFAM = PF07714;PF08263;PF00560)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'nbv0.5scaffold3669_57859-62264' '(at5g58300 : 705.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G08680.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 239.0) no description available & (q8lkz1|nork_pea : 178.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|88314 : 136.0) no description available & (reliability: 1410.0) & (original description: Putative At5g58300, Description = Probable inactive receptor kinase At5g58300, PFAM = PF00069;PF08263)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben044scf00000229ctg006_17030-21721' '(at1g48480 : 645.0) Arabidopsis thaliana receptor-like protein kinase (RKL1) gene; receptor-like kinase 1 (RKL1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: receptor-like kinase 902 (TAIR:AT3G17840.1); Has 150712 Blast hits to 111636 proteins in 3789 species: Archae - 114; Bacteria - 11711; Metazoa - 42617; Fungi - 8101; Plants - 71209; Viruses - 324; Other Eukaryotes - 16636 (source: NCBI BLink). & (gnl|cdd|36401 : 243.0) no description available & (q8lpb4|pskr_dauca : 172.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 151.0) no description available & (reliability: 1290.0) & (original description: Putative RKL1, Description = Probable inactive receptor kinase At1g48480, PFAM = PF00069;PF08263)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben044scf00002272ctg024_5051-9619' '(at5g58300 : 506.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G08680.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 257.0) no description available & (q8lpb4|pskr_dauca : 160.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 145.0) no description available & (reliability: 1012.0) & (original description: Putative At5g58300, Description = Probable inactive receptor kinase At5g58300, PFAM = PF00560;PF00560;PF08263;PF00069)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben044scf00002673ctg006_1-4970' '(at4g37250 : 719.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G23300.1); Has 127505 Blast hits to 87004 proteins in 3796 species: Archae - 113; Bacteria - 9564; Metazoa - 32249; Fungi - 5071; Plants - 68196; Viruses - 226; Other Eukaryotes - 12086 (source: NCBI BLink). & (gnl|cdd|36401 : 217.0) no description available & (p17801|kpro_maize : 130.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47550 : 121.0) no description available & (reliability: 1438.0) & (original description: Putative At4g37250, Description = Probable LRR receptor-like serine/threonine-protein kinase At4g37250, PFAM = PF00069;PF13855;PF08263)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben044scf00007533ctg006_730-6405' '(at4g37250 : 654.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G23300.1); Has 127505 Blast hits to 87004 proteins in 3796 species: Archae - 113; Bacteria - 9564; Metazoa - 32249; Fungi - 5071; Plants - 68196; Viruses - 226; Other Eukaryotes - 12086 (source: NCBI BLink). & (gnl|cdd|36401 : 204.0) no description available & (p17801|kpro_maize : 135.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 127.0) no description available & (reliability: 1308.0) & (original description: Putative At4g34220, Description = Receptor protein kinase-like protein At4g34220, PFAM = PF08263;PF00560;PF13855;PF00069)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben044scf00011115ctg000_1-2930' '(at5g35390 : 237.0) Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis.; Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: apical plasma membrane, apical part of cell; EXPRESSED IN: sepal, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G07040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 84.8) no description available & (reliability: 474.0) & (original description: Putative PRK1, Description = Putative LRR receptor-like serine/threonine-protein kinase RLK, PFAM = PF00560;PF07714;PF08263;PF13855)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben044scf00012132ctg006_1-4219' '(at2g36570 : 733.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT1G68400.1); Has 135980 Blast hits to 106098 proteins in 4276 species: Archae - 124; Bacteria - 13214; Metazoa - 37456; Fungi - 7266; Plants - 62446; Viruses - 283; Other Eukaryotes - 15191 (source: NCBI BLink). & (gnl|cdd|36401 : 254.0) no description available & (q8lpb4|pskr_dauca : 178.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|88314 : 146.0) no description available & (reliability: 1466.0) & (original description: Putative PXC1, Description = Leucine-rich repeat receptor-like protein kinase PXC1, PFAM = PF08263;PF00560;PF00560;PF00069)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben044scf00013749ctg013_10680-16536' '(at4g37250 : 756.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G23300.1); Has 127505 Blast hits to 87004 proteins in 3796 species: Archae - 113; Bacteria - 9564; Metazoa - 32249; Fungi - 5071; Plants - 68196; Viruses - 226; Other Eukaryotes - 12086 (source: NCBI BLink). & (gnl|cdd|36401 : 218.0) no description available & (p17801|kpro_maize : 127.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47550 : 120.0) no description available & (reliability: 1512.0) & (original description: Putative RLK, Description = LRR-RLK, PFAM = PF13855;PF00069;PF08263)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben044scf00021145ctg007_4150-8953' '(at3g42880 : 502.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G20690.1); Has 99886 Blast hits to 64132 proteins in 3251 species: Archae - 77; Bacteria - 7250; Metazoa - 18347; Fungi - 2712; Plants - 63147; Viruses - 166; Other Eukaryotes - 8187 (source: NCBI BLink). & (gnl|cdd|36401 : 209.0) no description available & (q8lpb4|pskr_dauca : 148.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 117.0) no description available & (reliability: 1004.0) & (original description: Putative PRK3, Description = Pollen receptor-like kinase 3, PFAM = PF00069;PF08263;PF13855)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben044scf00033783ctg007_17150-22512' '(at5g35390 : 513.0) Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis.; Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: apical plasma membrane, apical part of cell; EXPRESSED IN: sepal, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G07040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 191.0) no description available & (q8lpb4|pskr_dauca : 178.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 113.0) no description available & (reliability: 1026.0) & (original description: Putative PRK1, Description = Pollen receptor-like kinase 1, PFAM = PF00069)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben044scf00055038ctg003_2003-6624' '(at2g36570 : 739.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT1G68400.1); Has 135980 Blast hits to 106098 proteins in 4276 species: Archae - 124; Bacteria - 13214; Metazoa - 37456; Fungi - 7266; Plants - 62446; Viruses - 283; Other Eukaryotes - 15191 (source: NCBI BLink). & (gnl|cdd|36401 : 254.0) no description available & (q8lpb4|pskr_dauca : 181.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|88314 : 147.0) no description available & (reliability: 1478.0) & (original description: Putative PXC1, Description = Leucine-rich repeat receptor-like protein kinase PXC1, PFAM = PF08263;PF07714;PF00560)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf00114_28769-36471' '(at1g10850 : 739.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G60630.1); Has 141918 Blast hits to 107530 proteins in 3087 species: Archae - 92; Bacteria - 12469; Metazoa - 36374; Fungi - 8455; Plants - 68016; Viruses - 276; Other Eukaryotes - 16236 (source: NCBI BLink). & (gnl|cdd|36401 : 196.0) no description available & (q8lpb4|pskr_dauca : 144.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 141.0) no description available & (reliability: 1478.0) & (original description: Putative At1g60630, Description = Inactive leucine-rich repeat receptor-like serine/threonine-protein kinase At1g60630, PFAM = PF00069;PF08263)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf00152_619451-622015' '(at4g36180 : 87.4) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT1G75640.1); Has 274404 Blast hits to 147338 proteins in 4291 species: Archae - 207; Bacteria - 28458; Metazoa - 89754; Fungi - 12028; Plants - 112070; Viruses - 470; Other Eukaryotes - 31417 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative At1g25320, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF00560)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf00168_377573-379315' '(at3g56100 : 91.7) Protein kinase expressed in meristematic cells. Phosphorylates AGL24.; meristematic receptor-like kinase (MRLK); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: inflorescence meristem receptor-like kinase 2 (TAIR:AT3G51740.1); Has 154347 Blast hits to 110289 proteins in 3296 species: Archae - 124; Bacteria - 13554; Metazoa - 45622; Fungi - 8090; Plants - 69121; Viruses - 344; Other Eukaryotes - 17492 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative PGSC0003DMG400005590, Description = Receptor like protein 15, putative, PFAM = PF00560;PF00560)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf00262_442838-447417' '(at5g58300 : 491.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G08680.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 249.0) no description available & (q8lpb4|pskr_dauca : 160.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 143.0) no description available & (reliability: 982.0) & (original description: Putative At5g58300, Description = Probable inactive receptor kinase At5g58300, PFAM = PF08263;PF00069;PF13855;PF00560)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf00298_232592-237135' '(at3g42880 : 576.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G20690.1); Has 99886 Blast hits to 64132 proteins in 3251 species: Archae - 77; Bacteria - 7250; Metazoa - 18347; Fungi - 2712; Plants - 63147; Viruses - 166; Other Eukaryotes - 8187 (source: NCBI BLink). & (gnl|cdd|36401 : 198.0) no description available & (q8lpb4|pskr_dauca : 143.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|88314 : 117.0) no description available & (reliability: 1152.0) & (original description: Putative PRK3, Description = Pollen receptor-like kinase 3, PFAM = PF00069;PF08263)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf00338_901578-906636' '(at5g35390 : 301.0) Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis.; Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: apical plasma membrane, apical part of cell; EXPRESSED IN: sepal, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G07040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 211.0) no description available & (q8lpb4|pskr_dauca : 177.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 135.0) no description available & (reliability: 602.0) & (original description: Putative Sb01g018440, Description = Putative uncharacterized protein Sb01g018440, PFAM = PF08263;PF07714)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf00360_421513-428873' '(at4g31250 : 490.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, embryo, leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G35390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 189.0) no description available & (q8lpb4|pskr_dauca : 171.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 112.0) no description available & (reliability: 980.0) & (original description: Putative At4g31250, Description = Probable LRR receptor-like serine/threonine-protein kinase At4g31250, PFAM = PF08263;PF00069;PF13855)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf00408_36306-43818' '(at3g57830 : 338.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G42290.1); Has 115878 Blast hits to 74055 proteins in 2436 species: Archae - 82; Bacteria - 7967; Metazoa - 22555; Fungi - 3788; Plants - 70683; Viruses - 150; Other Eukaryotes - 10653 (source: NCBI BLink). & (gnl|cdd|36401 : 204.0) no description available & (p93194|rpk1_iponi : 138.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|87344 : 129.0) no description available & (reliability: 676.0) & (original description: Putative BnaA09g37080D, Description = BnaA09g37080D protein, PFAM = PF13855;PF08263;PF07714)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf00773_101061-105389' '(at5g58300 : 685.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G08680.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 246.0) no description available & (q8lpb4|pskr_dauca : 234.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|88314 : 144.0) no description available & (reliability: 1370.0) & (original description: Putative At5g58300, Description = Probable inactive receptor kinase At5g58300, PFAM = PF08263;PF00069)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf00919_600116-607563' '(at5g10020 : 1073.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G27060.1); Has 139678 Blast hits to 85602 proteins in 3004 species: Archae - 100; Bacteria - 15783; Metazoa - 35548; Fungi - 4368; Plants - 70555; Viruses - 172; Other Eukaryotes - 13152 (source: NCBI BLink). & (gnl|cdd|36401 : 195.0) no description available & (p93194|rpk1_iponi : 177.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|29142 : 110.0) no description available & (reliability: 2146.0) & (original description: Putative At5g10020, Description = Probable inactive receptor kinase At5g10020, PFAM = PF12799;PF00560;PF13855;PF13855;PF08263;PF00069)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf00935_25862-31082' '(at1g68400 : 731.0) leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G26730.1); Has 160938 Blast hits to 120966 proteins in 4540 species: Archae - 117; Bacteria - 17746; Metazoa - 43976; Fungi - 9280; Plants - 71738; Viruses - 378; Other Eukaryotes - 17703 (source: NCBI BLink). & (gnl|cdd|36401 : 257.0) no description available & (q8lpb4|pskr_dauca : 182.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 148.0) no description available & (reliability: 1462.0) & (original description: Putative At1g68400, Description = Probable leucine-rich repeat receptor-like protein kinase At1g68400, PFAM = PF00069;PF08263)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf01085_282222-286834' '(at3g08680 : 604.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G58300.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 248.0) no description available & (q8lpb4|pskr_dauca : 151.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 141.0) no description available & (reliability: 1208.0) & (original description: Putative At3g08680, Description = Probable inactive receptor kinase At3g08680, PFAM = PF00069;PF08263;PF00560;PF00560)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf01237_742535-747513' '(at3g51740 : 750.0) encodes a leucine-repeat receptor kinase expressed in inflorescence meristem. Locus association was made from performing sequence analysis with IMK3 (MRLK) whose locus association was provided by the authors.; inflorescence meristem receptor-like kinase 2 (IMK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cell wall, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: meristematic receptor-like kinase (TAIR:AT3G56100.1); Has 188484 Blast hits to 128319 proteins in 4033 species: Archae - 136; Bacteria - 17470; Metazoa - 63423; Fungi - 9529; Plants - 75715; Viruses - 437; Other Eukaryotes - 21774 (source: NCBI BLink). & (gnl|cdd|36401 : 260.0) no description available & (q8lpb4|pskr_dauca : 254.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 150.0) no description available & (reliability: 1376.0) & (original description: Putative rhg1g, Description = Probably inactive leucine-rich repeat receptor-like protein kinase IMK2, PFAM = PF13855;PF13855;PF07714;PF08263)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf01395_56202-62146' '(at4g20940 : 907.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: signal transduction, N-terminal protein myristoylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G10020.1); Has 124696 Blast hits to 48167 proteins in 1508 species: Archae - 53; Bacteria - 7002; Metazoa - 34401; Fungi - 1693; Plants - 72944; Viruses - 23; Other Eukaryotes - 8580 (source: NCBI BLink). & (gnl|cdd|36401 : 208.0) no description available & (p93194|rpk1_iponi : 157.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|47549 : 117.0) no description available & (reliability: 1814.0) & (original description: Putative At4g20940, Description = Probable LRR receptor-like serine/threonine-protein kinase At4g20940, PFAM = PF13516;PF13516;PF13855;PF13855;PF00560;PF07714;PF08263)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf01463_327225-332219' '(at5g05160 : 301.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G58300.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 193.0) no description available & (q8lpb4|pskr_dauca : 153.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 103.0) no description available & (reliability: 602.0) & (original description: Putative glysoja_045931, Description = Putative inactive receptor kinase, PFAM = PF08263;PF07714)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf01940_25825-30596' '(at1g48480 : 642.0) Arabidopsis thaliana receptor-like protein kinase (RKL1) gene; receptor-like kinase 1 (RKL1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: receptor-like kinase 902 (TAIR:AT3G17840.1); Has 150712 Blast hits to 111636 proteins in 3789 species: Archae - 114; Bacteria - 11711; Metazoa - 42617; Fungi - 8101; Plants - 71209; Viruses - 324; Other Eukaryotes - 16636 (source: NCBI BLink). & (gnl|cdd|36401 : 246.0) no description available & (q8lpb4|pskr_dauca : 168.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 151.0) no description available & (reliability: 1284.0) & (original description: Putative RKL1, Description = Probable inactive receptor kinase At1g48480, PFAM = PF08263;PF00069)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf02460_576062-580351' '(at3g42880 : 562.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G20690.1); Has 99886 Blast hits to 64132 proteins in 3251 species: Archae - 77; Bacteria - 7250; Metazoa - 18347; Fungi - 2712; Plants - 63147; Viruses - 166; Other Eukaryotes - 8187 (source: NCBI BLink). & (gnl|cdd|36401 : 192.0) no description available & (q8l4h4|nork_medtr : 132.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 115.0) no description available & (reliability: 1124.0) & (original description: Putative PRK3, Description = Pollen receptor-like kinase 3, PFAM = PF00069;PF13855;PF08263;PF00560)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf02513_503264-509485' '(at2g26730 : 228.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G58300.2); Has 147963 Blast hits to 108487 proteins in 3857 species: Archae - 104; Bacteria - 12149; Metazoa - 40706; Fungi - 7620; Plants - 70847; Viruses - 383; Other Eukaryotes - 16154 (source: NCBI BLink). & (gnl|cdd|36401 : 180.0) no description available & (q8lpb4|pskr_dauca : 130.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 121.0) no description available & (reliability: 456.0) & (original description: Putative glysoja_005561, Description = Putative inactive receptor kinase, PFAM = PF08263;PF00069)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf02575_22082-26590' '(at5g67200 : 657.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G50230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 176.0) no description available & (gnl|cdd|84488 : 137.0) no description available & (q8lpb4|pskr_dauca : 121.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1314.0) & (original description: Putative At5g67200, Description = Probable inactive receptor kinase At5g67200, PFAM = PF00069)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf02790_226677-233062' '(at2g26730 : 687.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G58300.2); Has 147963 Blast hits to 108487 proteins in 3857 species: Archae - 104; Bacteria - 12149; Metazoa - 40706; Fungi - 7620; Plants - 70847; Viruses - 383; Other Eukaryotes - 16154 (source: NCBI BLink). & (gnl|cdd|36401 : 231.0) no description available & (gnl|cdd|29142 : 136.0) no description available & (q8lpb4|pskr_dauca : 131.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1374.0) & (original description: Putative At2g26730, Description = Probable inactive receptor kinase At2g26730, PFAM = PF00069;PF08263;PF13855)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf02832_425087-430815' '(at4g37250 : 629.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G23300.1); Has 127505 Blast hits to 87004 proteins in 3796 species: Archae - 113; Bacteria - 9564; Metazoa - 32249; Fungi - 5071; Plants - 68196; Viruses - 226; Other Eukaryotes - 12086 (source: NCBI BLink). & (gnl|cdd|36401 : 203.0) no description available & (p17801|kpro_maize : 133.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47550 : 128.0) no description available & (reliability: 1258.0) & (original description: Putative At4g37250, Description = Probable LRR receptor-like serine/threonine-protein kinase At4g37250, PFAM = PF00560;PF13855;PF08263;PF00069)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf02854_203711-208839' '(at1g48480 : 509.0) Arabidopsis thaliana receptor-like protein kinase (RKL1) gene; receptor-like kinase 1 (RKL1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: receptor-like kinase 902 (TAIR:AT3G17840.1); Has 150712 Blast hits to 111636 proteins in 3789 species: Archae - 114; Bacteria - 11711; Metazoa - 42617; Fungi - 8101; Plants - 71209; Viruses - 324; Other Eukaryotes - 16636 (source: NCBI BLink). & (gnl|cdd|36401 : 202.0) no description available & (gnl|cdd|84488 : 136.0) no description available & (q8lpb4|pskr_dauca : 134.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1018.0) & (original description: Putative RKL1, Description = Probable inactive receptor kinase At1g48480, PFAM = PF13855;PF08263;PF00069)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf03061_44066-53678' '(at2g26730 : 339.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G58300.2); Has 147963 Blast hits to 108487 proteins in 3857 species: Archae - 104; Bacteria - 12149; Metazoa - 40706; Fungi - 7620; Plants - 70847; Viruses - 383; Other Eukaryotes - 16154 (source: NCBI BLink). & (gnl|cdd|36401 : 143.0) no description available & (q8lpb4|pskr_dauca : 100.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 96.4) no description available & (reliability: 678.0) & (original description: Putative Os03g0712400, Description = Os03g0712400 protein, PFAM = PF00069)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf03817_1261580-1270964' '(at2g26730 : 184.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G58300.2); Has 147963 Blast hits to 108487 proteins in 3857 species: Archae - 104; Bacteria - 12149; Metazoa - 40706; Fungi - 7620; Plants - 70847; Viruses - 383; Other Eukaryotes - 16154 (source: NCBI BLink). & (gnl|cdd|36401 : 182.0) no description available & (q8lpb4|pskr_dauca : 115.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 101.0) no description available & (reliability: 368.0) & (original description: Putative DIPM2, Description = Putative inactive receptor kinase, PFAM = PF07714;PF00847;PF00847)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf03817_1262060-1266304' '(at2g26730 : 182.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G58300.2); Has 147963 Blast hits to 108487 proteins in 3857 species: Archae - 104; Bacteria - 12149; Metazoa - 40706; Fungi - 7620; Plants - 70847; Viruses - 383; Other Eukaryotes - 16154 (source: NCBI BLink). & (gnl|cdd|36401 : 180.0) no description available & (q8lpb4|pskr_dauca : 112.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 100.0) no description available & (reliability: 364.0) & (original description: Putative glysoja_045931, Description = Putative inactive receptor kinase, PFAM = PF07714;PF08263)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf03985_544056-548347' '(at5g58300 : 130.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G08680.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 127.0) no description available & (q8lpb4|pskr_dauca : 82.8) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 260.0) & (original description: Putative PGSC0003DMG400012157, Description = Leucine-rich repeat protein kinase family protein, putative, PFAM = PF07714)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf04123_121019-125279' '(at5g58300 : 652.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G08680.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 237.0) no description available & (gnl|cdd|88314 : 135.0) no description available & (q8lpb4|pskr_dauca : 132.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1304.0) & (original description: Putative RKL1, Description = Putative inactive receptor kinase, PFAM = PF08263;PF07714)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf04292_53198-57721' '(at3g51740 : 785.0) encodes a leucine-repeat receptor kinase expressed in inflorescence meristem. Locus association was made from performing sequence analysis with IMK3 (MRLK) whose locus association was provided by the authors.; inflorescence meristem receptor-like kinase 2 (IMK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cell wall, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: meristematic receptor-like kinase (TAIR:AT3G56100.1); Has 188484 Blast hits to 128319 proteins in 4033 species: Archae - 136; Bacteria - 17470; Metazoa - 63423; Fungi - 9529; Plants - 75715; Viruses - 437; Other Eukaryotes - 21774 (source: NCBI BLink). & (gnl|cdd|36401 : 272.0) no description available & (q8lpb4|pskr_dauca : 176.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 159.0) no description available & (reliability: 1464.0) & (original description: Putative IMK3, Description = Probable leucine-rich repeat receptor-like protein kinase IMK3, PFAM = PF13855;PF08263;PF07714;PF00560)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf04903_220687-224893' '(at5g58300 : 701.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G08680.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 239.0) no description available & (q8lkz1|nork_pea : 179.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|88314 : 136.0) no description available & (reliability: 1402.0) & (original description: Putative At5g05160, Description = Probable leucine-rich repeat receptor-like protein kinase At5g05160, PFAM = PF00069;PF08263)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf04903_220711-225160' '(at5g58300 : 702.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G08680.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 239.0) no description available & (q8lkz1|nork_pea : 180.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|88314 : 136.0) no description available & (reliability: 1404.0) & (original description: Putative At5g58300, Description = Probable inactive receptor kinase At5g58300, PFAM = PF08263;PF00069)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf05262_122088-126353' '(at4g23740 : 567.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G64210.1); Has 133447 Blast hits to 93425 proteins in 3201 species: Archae - 108; Bacteria - 9755; Metazoa - 33158; Fungi - 5971; Plants - 69957; Viruses - 278; Other Eukaryotes - 14220 (source: NCBI BLink). & (gnl|cdd|36401 : 232.0) no description available & (q8lpb4|pskr_dauca : 134.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|88314 : 131.0) no description available & (reliability: 1134.0) & (original description: Putative At4g23740, Description = Probable inactive receptor kinase At4g23740, PFAM = PF00069;PF00560;PF00560;PF08263;PF13855)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf05627_35802-40067' '(at2g01210 : 921.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast stroma, chloroplast, plasma membrane, plant-type cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G25320.1); Has 133812 Blast hits to 98087 proteins in 4104 species: Archae - 103; Bacteria - 11207; Metazoa - 34549; Fungi - 6957; Plants - 66297; Viruses - 188; Other Eukaryotes - 14511 (source: NCBI BLink). & (gnl|cdd|36401 : 251.0) no description available & (q8lpb4|pskr_dauca : 165.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 126.0) no description available & (reliability: 1842.0) & (original description: Putative ZAR1, Description = Receptor protein kinase-like protein ZAR1, PFAM = PF08263;PF00069;PF13855)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf06081_389666-395184' '(at1g68400 : 409.0) leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G26730.1); Has 160938 Blast hits to 120966 proteins in 4540 species: Archae - 117; Bacteria - 17746; Metazoa - 43976; Fungi - 9280; Plants - 71738; Viruses - 378; Other Eukaryotes - 17703 (source: NCBI BLink). & (gnl|cdd|36401 : 199.0) no description available & (p93194|rpk1_iponi : 134.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|29142 : 102.0) no description available & (reliability: 818.0) & (original description: Putative DIPM2, Description = Putative receptor kinase, PFAM = PF13855;PF08263;PF07714)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf06144_118733-122256' '(at4g20940 : 519.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: signal transduction, N-terminal protein myristoylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G10020.1); Has 124696 Blast hits to 48167 proteins in 1508 species: Archae - 53; Bacteria - 7002; Metazoa - 34401; Fungi - 1693; Plants - 72944; Viruses - 23; Other Eukaryotes - 8580 (source: NCBI BLink). & (p93194|rpk1_iponi : 120.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|39396 : 101.0) no description available & (reliability: 1038.0) & (original description: Putative At4g20940, Description = Leucine-rich repeat family protein, PFAM = PF13516;PF13516;PF13855;PF08263)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf06204_60877-64946' '(at5g53320 : 198.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: hypocotyl, sepal, root, guard cell, cultured cell; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G24100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 173.0) no description available & (p93194|rpk1_iponi : 127.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|84488 : 101.0) no description available & (reliability: 396.0) & (original description: Putative PGSC0003DMG400022189, Description = Putative inactive receptor kinase At5g53320 family, PFAM = PF13855;PF00069)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf06565_339580-343581' '(at5g58300 : 694.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G08680.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 244.0) no description available & (q8lpb4|pskr_dauca : 167.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|88314 : 139.0) no description available & (reliability: 1388.0) & (original description: Putative At5g58300, Description = Probable inactive receptor kinase At5g58300, PFAM = PF00069;PF00560;PF08263)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf06898_90956-97651' '(at4g20940 : 922.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: signal transduction, N-terminal protein myristoylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G10020.1); Has 124696 Blast hits to 48167 proteins in 1508 species: Archae - 53; Bacteria - 7002; Metazoa - 34401; Fungi - 1693; Plants - 72944; Viruses - 23; Other Eukaryotes - 8580 (source: NCBI BLink). & (gnl|cdd|36401 : 210.0) no description available & (p93194|rpk1_iponi : 194.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|47549 : 114.0) no description available & (reliability: 1844.0) & (original description: Putative At4g20940, Description = Probable LRR receptor-like serine/threonine-protein kinase At4g20940, PFAM = PF08263;PF07714;PF13516;PF13516;PF13855;PF13855)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf07643_9485-14068' '(at4g23740 : 566.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G64210.1); Has 133447 Blast hits to 93425 proteins in 3201 species: Archae - 108; Bacteria - 9755; Metazoa - 33158; Fungi - 5971; Plants - 69957; Viruses - 278; Other Eukaryotes - 14220 (source: NCBI BLink). & (gnl|cdd|36401 : 232.0) no description available & (q8lpb4|pskr_dauca : 139.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|88314 : 132.0) no description available & (reliability: 1132.0) & (original description: Putative At5g53320, Description = Probable inactive receptor kinase At5g53320, PFAM = PF00560;PF00560;PF00069;PF13855;PF08263)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf07681_100504-106647' '(at2g27060 : 578.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G10020.1); Has 117505 Blast hits to 68268 proteins in 2350 species: Archae - 92; Bacteria - 11270; Metazoa - 27205; Fungi - 2913; Plants - 66366; Viruses - 137; Other Eukaryotes - 9522 (source: NCBI BLink). & (gnl|cdd|36401 : 195.0) no description available & (p93194|rpk1_iponi : 145.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|47549 : 89.5) no description available & (reliability: 1156.0) & (original description: Putative At2g27060, Description = Leucine-rich repeat protein kinase-like protein, PFAM = PF07714;PF13855;PF13855;PF08263)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf08706_225797-230221' '(at5g07620 : 372.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G61570.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 206.0) no description available & (q8l4h4|nork_medtr : 128.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|84488 : 119.0) no description available & (reliability: 744.0) & (original description: Putative At5g07620, Description = Protein kinase family protein, PFAM = PF00069)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf09334_470997-474209' '(at3g17840 : 265.0) Encodes a receptor-like kinase found at the cell surface of various tissues. Its function remains unknown.; receptor-like kinase 902 (RLK902); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor-like kinase 1 (TAIR:AT1G48480.1); Has 143949 Blast hits to 109803 proteins in 3756 species: Archae - 98; Bacteria - 11788; Metazoa - 41712; Fungi - 7708; Plants - 66121; Viruses - 325; Other Eukaryotes - 16197 (source: NCBI BLink). & (gnl|cdd|36401 : 206.0) no description available & (q8lpb4|pskr_dauca : 158.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 119.0) no description available & (reliability: 530.0) & (original description: Putative RKL1, Description = Putative inactive receptor kinase, PFAM = PF00069)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf09618_71514-77388' '(at1g67510 : 934.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G01210.1); Has 143953 Blast hits to 102465 proteins in 3529 species: Archae - 126; Bacteria - 14252; Metazoa - 36189; Fungi - 7617; Plants - 70099; Viruses - 200; Other Eukaryotes - 15470 (source: NCBI BLink). & (gnl|cdd|36401 : 254.0) no description available & (q8lpb4|pskr_dauca : 173.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 146.0) no description available & (reliability: 1868.0) & (original description: Putative ZAR1, Description = Receptor protein kinase-like protein ZAR1, PFAM = PF00069;PF13855;PF13855;PF08263)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf09706_97215-102163' '(at3g42880 : 539.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G20690.1); Has 99886 Blast hits to 64132 proteins in 3251 species: Archae - 77; Bacteria - 7250; Metazoa - 18347; Fungi - 2712; Plants - 63147; Viruses - 166; Other Eukaryotes - 8187 (source: NCBI BLink). & (gnl|cdd|36401 : 206.0) no description available & (q8lpb4|pskr_dauca : 200.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 118.0) no description available & (reliability: 1078.0) & (original description: Putative Sb10g006480, Description = Putative uncharacterized protein Sb10g006480, PFAM = PF08263;PF00560;PF00069)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf10152_427353-431346' '(at3g56100 : 730.0) Protein kinase expressed in meristematic cells. Phosphorylates AGL24.; meristematic receptor-like kinase (MRLK); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: inflorescence meristem receptor-like kinase 2 (TAIR:AT3G51740.1); Has 154347 Blast hits to 110289 proteins in 3296 species: Archae - 124; Bacteria - 13554; Metazoa - 45622; Fungi - 8090; Plants - 69121; Viruses - 344; Other Eukaryotes - 17492 (source: NCBI BLink). & (gnl|cdd|36401 : 274.0) no description available & (q8lpb4|pskr_dauca : 187.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 158.0) no description available & (reliability: 1460.0) & (original description: Putative IMK3, Description = Probable leucine-rich repeat receptor-like protein kinase IMK3, PFAM = PF07714;PF13855;PF13855;PF08263)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf11153_17264-22946' '(at5g35390 : 554.0) Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis.; Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: apical plasma membrane, apical part of cell; EXPRESSED IN: sepal, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G07040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 199.0) no description available & (p17801|kpro_maize : 133.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 113.0) no description available & (reliability: 1108.0) & (original description: Putative PRK1, Description = Pollen receptor-like kinase 1, PFAM = PF13855;PF08263;PF00069)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf11312_225644-230447' '(at3g42880 : 508.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G20690.1); Has 99886 Blast hits to 64132 proteins in 3251 species: Archae - 77; Bacteria - 7250; Metazoa - 18347; Fungi - 2712; Plants - 63147; Viruses - 166; Other Eukaryotes - 8187 (source: NCBI BLink). & (gnl|cdd|36401 : 199.0) no description available & (q8lpb4|pskr_dauca : 151.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 115.0) no description available & (reliability: 1016.0) & (original description: Putative PRK3, Description = Pollen receptor-like kinase 3, PFAM = PF00069;PF08263;PF13855)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf11524_33393-38823' '(at1g48480 : 588.0) Arabidopsis thaliana receptor-like protein kinase (RKL1) gene; receptor-like kinase 1 (RKL1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: receptor-like kinase 902 (TAIR:AT3G17840.1); Has 150712 Blast hits to 111636 proteins in 3789 species: Archae - 114; Bacteria - 11711; Metazoa - 42617; Fungi - 8101; Plants - 71209; Viruses - 324; Other Eukaryotes - 16636 (source: NCBI BLink). & (gnl|cdd|36401 : 240.0) no description available & (q8lpb4|pskr_dauca : 163.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 139.0) no description available & (reliability: 1176.0) & (original description: Putative RKL1, Description = Probable inactive receptor kinase At1g48480, PFAM = PF13855;PF00069;PF08263)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf11814_39725-44861' '(at3g24660 : 807.0) member of Receptor kinase-like protein family; transmembrane kinase-like 1 (TMKL1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: inflorescence meristem receptor-like kinase 2 (TAIR:AT3G51740.1); Has 102882 Blast hits to 72978 proteins in 2721 species: Archae - 76; Bacteria - 8021; Metazoa - 22133; Fungi - 3923; Plants - 58593; Viruses - 201; Other Eukaryotes - 9935 (source: NCBI BLink). & (gnl|cdd|36401 : 213.0) no description available & (q8lpb4|pskr_dauca : 122.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|88314 : 104.0) no description available & (reliability: 1614.0) & (original description: Putative TMKL1, Description = Putative kinase-like protein TMKL1, PFAM = PF07714)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf18343_81643-87994' '(at2g26730 : 454.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G58300.2); Has 147963 Blast hits to 108487 proteins in 3857 species: Archae - 104; Bacteria - 12149; Metazoa - 40706; Fungi - 7620; Plants - 70847; Viruses - 383; Other Eukaryotes - 16154 (source: NCBI BLink). & (gnl|cdd|36401 : 228.0) no description available & (gnl|cdd|29142 : 133.0) no description available & (q8lpb4|pskr_dauca : 128.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 908.0) & (original description: Putative Os01g0607900, Description = Os01g0607900 protein, PFAM = PF08263;PF00069)' T '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'niben101scf21684_27626-31313' '(at5g58300 : 648.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G08680.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 239.0) no description available & (gnl|cdd|88314 : 134.0) no description available & (q8lpb4|pskr_dauca : 130.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1296.0) & (original description: Putative RKL1, Description = Putative inactive receptor kinase, PFAM = PF07714;PF08263)' T '30.2.4' 'signalling.receptor kinases.leucine rich repeat IV' 'nbv0.3scaffold20430_12677-18104' '(at4g22730 : 738.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G51560.1); Has 137585 Blast hits to 82845 proteins in 2335 species: Archae - 76; Bacteria - 8092; Metazoa - 33995; Fungi - 4579; Plants - 77671; Viruses - 189; Other Eukaryotes - 12983 (source: NCBI BLink). & (gnl|cdd|36401 : 235.0) no description available & (q8l4h4|nork_medtr : 158.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 142.0) no description available & (reliability: 1476.0) & (original description: Putative RLK, Description = Leucine rich repeat receptor kinase, putative, PFAM = PF07714;PF00560;PF08263)' T '30.2.4' 'signalling.receptor kinases.leucine rich repeat IV' 'nbv0.3scaffold37022_14453-19538' '(at5g51560 : 795.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G45340.1); Has 121137 Blast hits to 67280 proteins in 2103 species: Archae - 75; Bacteria - 4844; Metazoa - 26993; Fungi - 2860; Plants - 75694; Viruses - 184; Other Eukaryotes - 10487 (source: NCBI BLink). & (gnl|cdd|36401 : 231.0) no description available & (q8l4h4|nork_medtr : 149.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 142.0) no description available & (reliability: 1590.0) & (original description: Putative RLK, Description = LRR receptor-like protein kinase, PFAM = PF08263;PF07714)' T '30.2.4' 'signalling.receptor kinases.leucine rich repeat IV' 'nbv0.5scaffold880_331275-337059' '(at2g25790 : 850.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT4G28650.1); Has 153683 Blast hits to 57628 proteins in 1967 species: Archae - 59; Bacteria - 14832; Metazoa - 38909; Fungi - 1966; Plants - 84929; Viruses - 21; Other Eukaryotes - 12967 (source: NCBI BLink). & (p93194|rpk1_iponi : 369.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 159.0) no description available & (reliability: 1700.0) & (original description: Putative At2g25790, Description = Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790, PFAM = PF00560;PF00069;PF08263;PF13855;PF13855;PF13855)' T '30.2.4' 'signalling.receptor kinases.leucine rich repeat IV' 'nbv0.5scaffold3524_82925-86523' '(at5g20480 : 150.0) Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.; EF-TU receptor (EFR); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47090.1); Has 211073 Blast hits to 132033 proteins in 4602 species: Archae - 167; Bacteria - 19808; Metazoa - 69159; Fungi - 9873; Plants - 87247; Viruses - 333; Other Eukaryotes - 24486 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 132.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35665 : 91.6) no description available & (reliability: 280.0) & (original description: Putative PGSC0003DMG400007611, Description = Non-specific serine/threonine protein kinase, PFAM = PF08263;PF13855;PF13855)' T '30.2.4' 'signalling.receptor kinases.leucine rich repeat IV' 'niben044scf00004388ctg037_425-3909' '(at3g24240 : 134.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT5G48940.1); Has 246558 Blast hits to 135557 proteins in 3810 species: Archae - 176; Bacteria - 24262; Metazoa - 71588; Fungi - 10499; Plants - 111580; Viruses - 361; Other Eukaryotes - 28092 (source: NCBI BLink). & (p93194|rpk1_iponi : 129.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 94.3) no description available & (reliability: 242.0) & (original description: Putative PGSC0003DMG400001016, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF13516)' T '30.2.4' 'signalling.receptor kinases.leucine rich repeat IV' 'niben044scf00050199ctg002_6461-12282' '(at2g25790 : 853.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT4G28650.1); Has 153683 Blast hits to 57628 proteins in 1967 species: Archae - 59; Bacteria - 14832; Metazoa - 38909; Fungi - 1966; Plants - 84929; Viruses - 21; Other Eukaryotes - 12967 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 317.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35838 : 159.0) no description available & (reliability: 1706.0) & (original description: Putative At2g25790, Description = Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790, PFAM = PF13855;PF13855;PF13855;PF13855;PF00069;PF07714;PF08263)' T '30.2.4' 'signalling.receptor kinases.leucine rich repeat IV' 'niben101scf00168_377573-379315' '(at3g56100 : 91.7) Protein kinase expressed in meristematic cells. Phosphorylates AGL24.; meristematic receptor-like kinase (MRLK); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: inflorescence meristem receptor-like kinase 2 (TAIR:AT3G51740.1); Has 154347 Blast hits to 110289 proteins in 3296 species: Archae - 124; Bacteria - 13554; Metazoa - 45622; Fungi - 8090; Plants - 69121; Viruses - 344; Other Eukaryotes - 17492 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative PGSC0003DMG400005590, Description = Receptor like protein 15, putative, PFAM = PF00560;PF00560)' T '30.2.4' 'signalling.receptor kinases.leucine rich repeat IV' 'niben101scf00439_1151647-1157056' '(at4g22730 : 674.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G51560.1); Has 137585 Blast hits to 82845 proteins in 2335 species: Archae - 76; Bacteria - 8092; Metazoa - 33995; Fungi - 4579; Plants - 77671; Viruses - 189; Other Eukaryotes - 12983 (source: NCBI BLink). & (gnl|cdd|36401 : 235.0) no description available & (q8l4h4|nork_medtr : 158.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 142.0) no description available & (reliability: 1348.0) & (original description: Putative RLK, Description = Leucine rich repeat receptor kinase, putative, PFAM = PF08263;PF07714)' T '30.2.4' 'signalling.receptor kinases.leucine rich repeat IV' 'niben101scf02566_424164-429948' '(at2g25790 : 853.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT4G28650.1); Has 153683 Blast hits to 57628 proteins in 1967 species: Archae - 59; Bacteria - 14832; Metazoa - 38909; Fungi - 1966; Plants - 84929; Viruses - 21; Other Eukaryotes - 12967 (source: NCBI BLink). & (p93194|rpk1_iponi : 374.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 167.0) no description available & (gnl|cdd|47550 : 87.2) no description available & (reliability: 1706.0) & (original description: Putative At2g25790, Description = Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790, PFAM = PF00560;PF00069;PF08263;PF13855;PF13855;PF13855)' T '30.2.4' 'signalling.receptor kinases.leucine rich repeat IV' 'niben101scf04416_10166-86009' '(at2g45340 : 798.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G51560.1); Has 128804 Blast hits to 78819 proteins in 2294 species: Archae - 81; Bacteria - 6216; Metazoa - 31402; Fungi - 3884; Plants - 74763; Viruses - 171; Other Eukaryotes - 12287 (source: NCBI BLink). & (gnl|cdd|36401 : 237.0) no description available & (q8l4h4|nork_medtr : 156.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|88314 : 142.0) no description available & (reliability: 1596.0) & (original description: Putative RLK, Description = LRR receptor-like protein kinase, PFAM = PF08263;PF13855;PF07714;PF00560)' T '30.2.4' 'signalling.receptor kinases.leucine rich repeat IV' 'niben101scf12414_180645-185829' '(at5g51560 : 796.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G45340.1); Has 121137 Blast hits to 67280 proteins in 2103 species: Archae - 75; Bacteria - 4844; Metazoa - 26993; Fungi - 2860; Plants - 75694; Viruses - 184; Other Eukaryotes - 10487 (source: NCBI BLink). & (gnl|cdd|36401 : 224.0) no description available & (q8l4h4|nork_medtr : 144.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|88314 : 138.0) no description available & (reliability: 1592.0) & (original description: Putative RLK, Description = LRR receptor-like protein kinase, PFAM = PF08263;PF07714)' T '30.2.4' 'signalling.receptor kinases.leucine rich repeat IV' 'niben101scf12866_59404-62225' '(at2g25790 : 131.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT4G28650.1); Has 153683 Blast hits to 57628 proteins in 1967 species: Archae - 59; Bacteria - 14832; Metazoa - 38909; Fungi - 1966; Plants - 84929; Viruses - 21; Other Eukaryotes - 12967 (source: NCBI BLink). & (p93194|rpk1_iponi : 108.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 92.4) no description available & (reliability: 262.0) & (original description: Putative BnaCnng18680D, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF13855)' T '30.2.5' 'signalling.receptor kinases.leucine rich repeat V' 'nbv0.3scaffold352_126087-131728' '(gnl|cdd|36401 : 167.0) no description available & (at1g24030 : 117.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 120365 Blast hits to 119013 proteins in 4490 species: Archae - 114; Bacteria - 14164; Metazoa - 43937; Fungi - 10244; Plants - 33641; Viruses - 447; Other Eukaryotes - 17818 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 103.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 86.0) no description available & (reliability: 214.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF07714;PF00069)' T '30.2.5' 'signalling.receptor kinases.leucine rich repeat V' 'nbv0.3scaffold23080_1533-11979' '(at4g03390 : 502.0) STRUBBELIG-receptor family 3 (SRF3); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 1 (TAIR:AT2G20850.1); Has 154480 Blast hits to 110338 proteins in 3974 species: Archae - 96; Bacteria - 13338; Metazoa - 40210; Fungi - 7879; Plants - 76281; Viruses - 315; Other Eukaryotes - 16361 (source: NCBI BLink). & (gnl|cdd|36401 : 308.0) no description available & (q8l4h4|nork_medtr : 190.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 149.0) no description available & (reliability: 1004.0) & (original description: Putative LRPK, Description = Protein STRUBBELIG-RECEPTOR FAMILY 3, PFAM = PF07714;PF13855)' T '30.2.5' 'signalling.receptor kinases.leucine rich repeat V' 'nbv0.3scaffold48992_2839-14374' '(at4g03390 : 533.0) STRUBBELIG-receptor family 3 (SRF3); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 1 (TAIR:AT2G20850.1); Has 154480 Blast hits to 110338 proteins in 3974 species: Archae - 96; Bacteria - 13338; Metazoa - 40210; Fungi - 7879; Plants - 76281; Viruses - 315; Other Eukaryotes - 16361 (source: NCBI BLink). & (gnl|cdd|36401 : 301.0) no description available & (q8lpb4|pskr_dauca : 189.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 151.0) no description available & (reliability: 1066.0) & (original description: Putative SRF8, Description = Protein STRUBBELIG-RECEPTOR FAMILY 8, PFAM = PF00560;PF07714;PF13855)' T '30.2.5' 'signalling.receptor kinases.leucine rich repeat V' 'nbv0.5scaffold17_269845-281145' '(at4g03390 : 761.0) STRUBBELIG-receptor family 3 (SRF3); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 1 (TAIR:AT2G20850.1); Has 154480 Blast hits to 110338 proteins in 3974 species: Archae - 96; Bacteria - 13338; Metazoa - 40210; Fungi - 7879; Plants - 76281; Viruses - 315; Other Eukaryotes - 16361 (source: NCBI BLink). & (gnl|cdd|36401 : 311.0) no description available & (q8l4h4|nork_medtr : 191.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 149.0) no description available & (reliability: 1522.0) & (original description: Putative SRF8, Description = Protein STRUBBELIG-RECEPTOR FAMILY 8, PFAM = PF07714;PF08263;PF13855)' T '30.2.5' 'signalling.receptor kinases.leucine rich repeat V' 'nbv0.5scaffold2780_186523-191379' '(at3g13065 : 227.0) STRUBBELIG-receptor family 4 (SRF4); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 5 (TAIR:AT1G78980.1); Has 161934 Blast hits to 117397 proteins in 3485 species: Archae - 127; Bacteria - 13410; Metazoa - 46563; Fungi - 8828; Plants - 74801; Viruses - 375; Other Eukaryotes - 17830 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative ltk3, Description = Protein STRUBBELIG-RECEPTOR FAMILY 6, PFAM = PF08263;PF13855)' T '30.2.5' 'signalling.receptor kinases.leucine rich repeat V' 'nbv0.5scaffold3513_10091-18892' '(at1g53730 : 717.0) STRUBBELIG-receptor family 6 (SRF6); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 7 (TAIR:AT3G14350.1); Has 158289 Blast hits to 119426 proteins in 3465 species: Archae - 133; Bacteria - 16895; Metazoa - 46669; Fungi - 8281; Plants - 68201; Viruses - 301; Other Eukaryotes - 17809 (source: NCBI BLink). & (gnl|cdd|36401 : 302.0) no description available & (q8lkz1|nork_pea : 183.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 153.0) no description available & (reliability: 1434.0) & (original description: Putative SRF6, Description = Protein STRUBBELIG-RECEPTOR FAMILY 6, PFAM = PF13855;PF08263;PF07714)' T '30.2.5' 'signalling.receptor kinases.leucine rich repeat V' 'nbv0.5scaffold5832_39207-50822' '(at4g03390 : 533.0) STRUBBELIG-receptor family 3 (SRF3); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 1 (TAIR:AT2G20850.1); Has 154480 Blast hits to 110338 proteins in 3974 species: Archae - 96; Bacteria - 13338; Metazoa - 40210; Fungi - 7879; Plants - 76281; Viruses - 315; Other Eukaryotes - 16361 (source: NCBI BLink). & (gnl|cdd|36401 : 302.0) no description available & (q8lpb4|pskr_dauca : 188.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 151.0) no description available & (reliability: 1066.0) & (original description: Putative SRF3, Description = Protein STRUBBELIG-RECEPTOR FAMILY 3, PFAM = PF13855;PF00560;PF07714)' T '30.2.5' 'signalling.receptor kinases.leucine rich repeat V' 'niben044scf00006756ctg004_3459-10544' '(at5g06820 : 684.0) STRUBBELIG-receptor family 2 (SRF2); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 8 (TAIR:AT4G22130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 309.0) no description available & (q8lkz1|nork_pea : 180.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|29142 : 151.0) no description available & (reliability: 1368.0) & (original description: Putative SRF2, Description = Protein STRUBBELIG-RECEPTOR FAMILY 2, PFAM = PF13855;PF00069;PF13516;PF08263)' T '30.2.5' 'signalling.receptor kinases.leucine rich repeat V' 'niben044scf00020940ctg000_11456-18868' '(at1g53730 : 584.0) STRUBBELIG-receptor family 6 (SRF6); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 7 (TAIR:AT3G14350.1); Has 158289 Blast hits to 119426 proteins in 3465 species: Archae - 133; Bacteria - 16895; Metazoa - 46669; Fungi - 8281; Plants - 68201; Viruses - 301; Other Eukaryotes - 17809 (source: NCBI BLink). & (gnl|cdd|36401 : 304.0) no description available & (q8lkz1|nork_pea : 181.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|29142 : 146.0) no description available & (reliability: 1168.0) & (original description: Putative LRR2, Description = Leucine-rich repeat protein, PFAM = PF07714;PF13855)' T '30.2.5' 'signalling.receptor kinases.leucine rich repeat V' 'niben044scf00031711ctg002_8098-16648' '(at1g53730 : 549.0) STRUBBELIG-receptor family 6 (SRF6); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 7 (TAIR:AT3G14350.1); Has 158289 Blast hits to 119426 proteins in 3465 species: Archae - 133; Bacteria - 16895; Metazoa - 46669; Fungi - 8281; Plants - 68201; Viruses - 301; Other Eukaryotes - 17809 (source: NCBI BLink). & (gnl|cdd|36401 : 337.0) no description available & (q8l4h4|nork_medtr : 204.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 168.0) no description available & (reliability: 1098.0) & (original description: Putative SRF6, Description = Protein STRUBBELIG-RECEPTOR FAMILY 6, PFAM = PF08263;PF07714;PF13516)' T '30.2.5' 'signalling.receptor kinases.leucine rich repeat V' 'niben101scf00180_419350-429762' '(at4g03390 : 640.0) STRUBBELIG-receptor family 3 (SRF3); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 1 (TAIR:AT2G20850.1); Has 154480 Blast hits to 110338 proteins in 3974 species: Archae - 96; Bacteria - 13338; Metazoa - 40210; Fungi - 7879; Plants - 76281; Viruses - 315; Other Eukaryotes - 16361 (source: NCBI BLink). & (gnl|cdd|36401 : 291.0) no description available & (o24585|cri4_maize : 177.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 161.0) no description available & (reliability: 1280.0) & (original description: Putative SRF3, Description = Protein STRUBBELIG-RECEPTOR FAMILY 3, PFAM = PF07714;PF13855)' T '30.2.5' 'signalling.receptor kinases.leucine rich repeat V' 'niben101scf00870_112081-119438' '(at1g53730 : 454.0) STRUBBELIG-receptor family 6 (SRF6); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 7 (TAIR:AT3G14350.1); Has 158289 Blast hits to 119426 proteins in 3465 species: Archae - 133; Bacteria - 16895; Metazoa - 46669; Fungi - 8281; Plants - 68201; Viruses - 301; Other Eukaryotes - 17809 (source: NCBI BLink). & (gnl|cdd|36401 : 330.0) no description available & (q8l4h4|nork_medtr : 200.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 159.0) no description available & (reliability: 908.0) & (original description: Putative SRF7, Description = Protein STRUBBELIG-RECEPTOR FAMILY 7, PFAM = PF13855;PF08263;PF07714;PF13516)' T '30.2.5' 'signalling.receptor kinases.leucine rich repeat V' 'niben101scf01192_556376-572254' '(at4g03390 : 509.0) STRUBBELIG-receptor family 3 (SRF3); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 1 (TAIR:AT2G20850.1); Has 154480 Blast hits to 110338 proteins in 3974 species: Archae - 96; Bacteria - 13338; Metazoa - 40210; Fungi - 7879; Plants - 76281; Viruses - 315; Other Eukaryotes - 16361 (source: NCBI BLink). & (gnl|cdd|36401 : 315.0) no description available & (q8l4h4|nork_medtr : 199.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 150.0) no description available & (reliability: 1018.0) & (original description: Putative SRF3, Description = Protein STRUBBELIG-RECEPTOR FAMILY 3, PFAM = PF13855;PF07714)' T '30.2.5' 'signalling.receptor kinases.leucine rich repeat V' 'niben101scf02145_377812-386493' '(at4g22130 : 885.0) STRUBBELIG-receptor family 8 (SRF8); FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 6 (TAIR:AT1G53730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 341.0) no description available & (q8l4h4|nork_medtr : 202.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 165.0) no description available & (reliability: 1770.0) & (original description: Putative SRF8, Description = Protein STRUBBELIG-RECEPTOR FAMILY 8, PFAM = PF13855;PF00069;PF08263)' T '30.2.5' 'signalling.receptor kinases.leucine rich repeat V' 'niben101scf02459_2230-9580' '(at1g78980 : 469.0) STRUBBELIG-receptor family 5 (SRF5); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 4 (TAIR:AT3G13065.1); Has 170876 Blast hits to 124647 proteins in 4182 species: Archae - 145; Bacteria - 15263; Metazoa - 50770; Fungi - 9097; Plants - 76380; Viruses - 385; Other Eukaryotes - 18836 (source: NCBI BLink). & (gnl|cdd|36401 : 287.0) no description available & (q8l4h4|nork_medtr : 179.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 151.0) no description available & (reliability: 938.0) & (original description: Putative LRPK, Description = Protein STRUBBELIG-RECEPTOR FAMILY 6, PFAM = PF07714)' T '30.2.5' 'signalling.receptor kinases.leucine rich repeat V' 'niben101scf02459_2627-14881' '(at1g78980 : 634.0) STRUBBELIG-receptor family 5 (SRF5); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 4 (TAIR:AT3G13065.1); Has 170876 Blast hits to 124647 proteins in 4182 species: Archae - 145; Bacteria - 15263; Metazoa - 50770; Fungi - 9097; Plants - 76380; Viruses - 385; Other Eukaryotes - 18836 (source: NCBI BLink). & (gnl|cdd|36401 : 288.0) no description available & (q8l4h4|nork_medtr : 179.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 153.0) no description available & (reliability: 1268.0) & (original description: Putative SRF5, Description = Protein STRUBBELIG-RECEPTOR FAMILY 5, PFAM = PF13855;PF07714;PF08263)' T '30.2.5' 'signalling.receptor kinases.leucine rich repeat V' 'niben101scf02733_86231-97775' '(at4g03390 : 766.0) STRUBBELIG-receptor family 3 (SRF3); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 1 (TAIR:AT2G20850.1); Has 154480 Blast hits to 110338 proteins in 3974 species: Archae - 96; Bacteria - 13338; Metazoa - 40210; Fungi - 7879; Plants - 76281; Viruses - 315; Other Eukaryotes - 16361 (source: NCBI BLink). & (gnl|cdd|36401 : 310.0) no description available & (q8l4h4|nork_medtr : 192.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 146.0) no description available & (reliability: 1532.0) & (original description: Putative SRF3, Description = Protein STRUBBELIG-RECEPTOR FAMILY 3, PFAM = PF07714;PF08263;PF13855)' T '30.2.5' 'signalling.receptor kinases.leucine rich repeat V' 'niben101scf05349_136959-142304' '(at3g13065 : 221.0) STRUBBELIG-receptor family 4 (SRF4); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 5 (TAIR:AT1G78980.1); Has 161934 Blast hits to 117397 proteins in 3485 species: Archae - 127; Bacteria - 13410; Metazoa - 46563; Fungi - 8828; Plants - 74801; Viruses - 375; Other Eukaryotes - 17830 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative ltk3, Description = Protein STRUBBELIG-RECEPTOR FAMILY 6, PFAM = PF08263;PF13855)' T '30.2.5' 'signalling.receptor kinases.leucine rich repeat V' 'niben101scf07488_74009-85892' '(at4g03390 : 514.0) STRUBBELIG-receptor family 3 (SRF3); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 1 (TAIR:AT2G20850.1); Has 154480 Blast hits to 110338 proteins in 3974 species: Archae - 96; Bacteria - 13338; Metazoa - 40210; Fungi - 7879; Plants - 76281; Viruses - 315; Other Eukaryotes - 16361 (source: NCBI BLink). & (gnl|cdd|36401 : 318.0) no description available & (q8l4h4|nork_medtr : 181.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 152.0) no description available & (reliability: 1028.0) & (original description: Putative SRF3, Description = Protein STRUBBELIG-RECEPTOR FAMILY 3, PFAM = PF13855;PF07714)' T '30.2.5' 'signalling.receptor kinases.leucine rich repeat V' 'niben101scf16185_33353-41969' '(at1g53730 : 756.0) STRUBBELIG-receptor family 6 (SRF6); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 7 (TAIR:AT3G14350.1); Has 158289 Blast hits to 119426 proteins in 3465 species: Archae - 133; Bacteria - 16895; Metazoa - 46669; Fungi - 8281; Plants - 68201; Viruses - 301; Other Eukaryotes - 17809 (source: NCBI BLink). & (gnl|cdd|36401 : 337.0) no description available & (q8l4h4|nork_medtr : 204.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 164.0) no description available & (reliability: 1512.0) & (original description: Putative SRF6, Description = Protein STRUBBELIG-RECEPTOR FAMILY 6, PFAM = PF07714;PF13516;PF08263)' T '30.2.6' 'signalling.receptor kinases.leucine rich repeat VI' 'nbv0.3scaffold4234_8029-13944' '(at1g14390 : 591.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G02780.1); Has 96517 Blast hits to 51613 proteins in 1566 species: Archae - 24; Bacteria - 6061; Metazoa - 18233; Fungi - 1323; Plants - 64840; Viruses - 89; Other Eukaryotes - 5947 (source: NCBI BLink). & (gnl|cdd|36401 : 191.0) no description available & (q8l4h4|nork_medtr : 135.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 107.0) no description available & (reliability: 1182.0) & (original description: Putative At1g14390, Description = Probable LRR receptor-like serine/threonine-protein kinase At1g14390, PFAM = PF13855;PF00069)' T '30.2.6' 'signalling.receptor kinases.leucine rich repeat VI' 'nbv0.3scaffold25621_14123-24218' '(at4g18640 : 555.0) Required for root hair elongation during tip growth.; morphogenesis of root hair 1 (MRH1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, root hair cell differentiation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G45840.2); Has 77438 Blast hits to 37028 proteins in 1172 species: Archae - 20; Bacteria - 1270; Metazoa - 6142; Fungi - 481; Plants - 65385; Viruses - 62; Other Eukaryotes - 4078 (source: NCBI BLink). & (gnl|cdd|36401 : 209.0) no description available & (q8lkz1|nork_pea : 126.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 102.0) no description available & (reliability: 1110.0) & (original description: Putative MDIS1, Description = Protein MALE DISCOVERER 1, PFAM = PF08263;PF13855;PF07714)' T '30.2.6' 'signalling.receptor kinases.leucine rich repeat VI' 'nbv0.3scaffold30017_16696-24120' '(at4g18640 : 569.0) Required for root hair elongation during tip growth.; morphogenesis of root hair 1 (MRH1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, root hair cell differentiation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G45840.2); Has 77438 Blast hits to 37028 proteins in 1172 species: Archae - 20; Bacteria - 1270; Metazoa - 6142; Fungi - 481; Plants - 65385; Viruses - 62; Other Eukaryotes - 4078 (source: NCBI BLink). & (gnl|cdd|36401 : 200.0) no description available & (q8lkz1|nork_pea : 114.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 94.8) no description available & (reliability: 1138.0) & (original description: Putative stkP, Description = Ser-Thr protein kinase, PFAM = PF08263;PF13855;PF07714)' T '30.2.6' 'signalling.receptor kinases.leucine rich repeat VI' 'niben044scf00025854ctg002_1-5355' '(at3g03770 : 740.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G14210.1). & (gnl|cdd|36401 : 192.0) no description available & (q8lkz1|nork_pea : 125.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|84488 : 87.3) no description available & (reliability: 1480.0) & (original description: Putative At3g03770, Description = Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770, PFAM = PF07714;PF13855)' T '30.2.6' 'signalling.receptor kinases.leucine rich repeat VI' 'niben044scf00053696ctg004_2840-4684' '(at5g14210 : 157.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G03770.2); Has 111153 Blast hits to 61478 proteins in 2137 species: Archae - 27; Bacteria - 5463; Metazoa - 27639; Fungi - 2569; Plants - 67603; Viruses - 117; Other Eukaryotes - 7735 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative LLR, Description = Putative inactive leucine-rich repeat receptor-like protein kinase, PFAM = )' T '30.2.6' 'signalling.receptor kinases.leucine rich repeat VI' 'niben044scf00058907ctg000_2001-4631' '(at4g18640 : 102.0) Required for root hair elongation during tip growth.; morphogenesis of root hair 1 (MRH1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, root hair cell differentiation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G45840.2); Has 77438 Blast hits to 37028 proteins in 1172 species: Archae - 20; Bacteria - 1270; Metazoa - 6142; Fungi - 481; Plants - 65385; Viruses - 62; Other Eukaryotes - 4078 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative MRH1, Description = Putative LRR receptor-like serine/threonine-protein kinase MRH1, PFAM = PF08263)' T '30.2.6' 'signalling.receptor kinases.leucine rich repeat VI' 'niben101scf00109_683557-690421' '(at5g14210 : 794.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G03770.2); Has 111153 Blast hits to 61478 proteins in 2137 species: Archae - 27; Bacteria - 5463; Metazoa - 27639; Fungi - 2569; Plants - 67603; Viruses - 117; Other Eukaryotes - 7735 (source: NCBI BLink). & (gnl|cdd|36401 : 203.0) no description available & (o24585|cri4_maize : 131.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|88314 : 94.1) no description available & (reliability: 1588.0) & (original description: Putative At3g03770, Description = Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770, PFAM = PF07714;PF13855)' T '30.2.6' 'signalling.receptor kinases.leucine rich repeat VI' 'niben101scf00133_633087-639578' '(at3g56050 : 417.0) Protein kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT2G40270.1); Has 41170 Blast hits to 40839 proteins in 1653 species: Archae - 20; Bacteria - 2328; Metazoa - 11695; Fungi - 793; Plants - 23080; Viruses - 152; Other Eukaryotes - 3102 (source: NCBI BLink). & (gnl|cdd|36401 : 225.0) no description available & (q8lkz1|nork_pea : 130.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 121.0) no description available & (reliability: 802.0) & (original description: Putative MDIS2, Description = Protein MALE DISCOVERER 2, PFAM = PF08263;PF07714;PF07714)' T '30.2.6' 'signalling.receptor kinases.leucine rich repeat VI' 'niben101scf01093_543680-551104' '(at4g18640 : 588.0) Required for root hair elongation during tip growth.; morphogenesis of root hair 1 (MRH1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, root hair cell differentiation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G45840.2); Has 77438 Blast hits to 37028 proteins in 1172 species: Archae - 20; Bacteria - 1270; Metazoa - 6142; Fungi - 481; Plants - 65385; Viruses - 62; Other Eukaryotes - 4078 (source: NCBI BLink). & (gnl|cdd|36401 : 200.0) no description available & (q8lkz1|nork_pea : 114.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 94.8) no description available & (reliability: 1176.0) & (original description: Putative MDIS2, Description = Protein MALE DISCOVERER 2, PFAM = PF13855;PF07714;PF08263)' T '30.2.6' 'signalling.receptor kinases.leucine rich repeat VI' 'niben101scf02167_92618-99143' '(at3g03770 : 709.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G14210.1). & (gnl|cdd|36401 : 183.0) no description available & (q8lpb4|pskr_dauca : 161.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 96.0) no description available & (reliability: 1418.0) & (original description: Putative At3g03770, Description = Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770, PFAM = PF13855;PF07714)' T '30.2.6' 'signalling.receptor kinases.leucine rich repeat VI' 'niben101scf02169_67739-74438' '(at2g40270 : 436.0) Protein kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT3G56050.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 228.0) no description available & (q8l4h4|nork_medtr : 134.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 122.0) no description available & (reliability: 834.0) & (original description: Putative stkP, Description = Ser-Thr protein kinase, PFAM = PF13855;PF07714;PF07714;PF08263)' T '30.2.6' 'signalling.receptor kinases.leucine rich repeat VI' 'niben101scf02638_108769-118877' '(at5g45840 : 571.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT4G18640.1). & (gnl|cdd|36401 : 209.0) no description available & (q8lkz1|nork_pea : 126.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 101.0) no description available & (reliability: 1142.0) & (original description: Putative MDIS1, Description = Protein MALE DISCOVERER 1, PFAM = PF13855;PF08263;PF07714)' T '30.2.6' 'signalling.receptor kinases.leucine rich repeat VI' 'niben101scf03093_11842-17926' '(at1g63430 : 870.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT5G41180.1). & (gnl|cdd|36401 : 206.0) no description available & (q8lpb4|pskr_dauca : 163.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|88314 : 90.6) no description available & (reliability: 1740.0) & (original description: Putative At1g63430, Description = Probable LRR receptor-like serine/threonine-protein kinase At1g63430, PFAM = PF08263;PF07714;PF13855)' T '30.2.6' 'signalling.receptor kinases.leucine rich repeat VI' 'niben101scf03227_345011-351083' '(at3g03770 : 793.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G14210.1). & (gnl|cdd|36401 : 192.0) no description available & (q8lpb4|pskr_dauca : 145.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 83.8) no description available & (reliability: 1586.0) & (original description: Putative At3g03770, Description = Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770, PFAM = PF07714;PF08263;PF13855)' T '30.2.6' 'signalling.receptor kinases.leucine rich repeat VI' 'niben101scf03766_240484-247091' '(at5g14210 : 731.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G03770.2); Has 111153 Blast hits to 61478 proteins in 2137 species: Archae - 27; Bacteria - 5463; Metazoa - 27639; Fungi - 2569; Plants - 67603; Viruses - 117; Other Eukaryotes - 7735 (source: NCBI BLink). & (gnl|cdd|36401 : 205.0) no description available & (q8l4h4|nork_medtr : 118.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|88314 : 92.5) no description available & (reliability: 1462.0) & (original description: Putative LLR, Description = Leucine-rich repeat kinase-like protein, PFAM = PF13855;PF07714)' T '30.2.6' 'signalling.receptor kinases.leucine rich repeat VI' 'niben101scf07531_35268-41992' '(at1g63430 : 867.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT5G41180.1). & (gnl|cdd|36401 : 209.0) no description available & (q8lpb4|pskr_dauca : 155.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|88314 : 92.9) no description available & (reliability: 1734.0) & (original description: Putative Sb06g033400, Description = Putative uncharacterized protein Sb06g033400, PFAM = PF08263;PF00560;PF07714)' T '30.2.6' 'signalling.receptor kinases.leucine rich repeat VI' 'niben101scf07736_146928-153477' '(at1g63430 : 867.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT5G41180.1). & (gnl|cdd|36401 : 206.0) no description available & (q8lpb4|pskr_dauca : 160.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 87.9) no description available & (reliability: 1734.0) & (original description: Putative At1g63430, Description = Probable LRR receptor-like serine/threonine-protein kinase At1g63430, PFAM = PF08263;PF07714)' T '30.2.6' 'signalling.receptor kinases.leucine rich repeat VI' 'niben101scf13962_30150-37638' '(at4g18640 : 631.0) Required for root hair elongation during tip growth.; morphogenesis of root hair 1 (MRH1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, root hair cell differentiation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G45840.2); Has 77438 Blast hits to 37028 proteins in 1172 species: Archae - 20; Bacteria - 1270; Metazoa - 6142; Fungi - 481; Plants - 65385; Viruses - 62; Other Eukaryotes - 4078 (source: NCBI BLink). & (gnl|cdd|36401 : 206.0) no description available & (q8lpb4|pskr_dauca : 117.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|88314 : 100.0) no description available & (reliability: 1262.0) & (original description: Putative MDIS2, Description = Protein MALE DISCOVERER 2, PFAM = PF07714;PF08263;PF13855)' T '30.2.7' 'signalling.receptor kinases.leucine rich repeat VII' 'nbv0.3scaffold46713_1-2367' '(at1g35710 : 137.0) Protein kinase family protein with leucine-rich repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT4G08850.1); Has 304074 Blast hits to 147448 proteins in 4766 species: Archae - 178; Bacteria - 29187; Metazoa - 106993; Fungi - 12531; Plants - 120860; Viruses - 430; Other Eukaryotes - 33895 (source: NCBI BLink). & (p93194|rpk1_iponi : 128.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 91.6) no description available & (reliability: 268.0) & (original description: Putative PGSC0003DMG400004164, Description = Non-specific serine/threonine protein kinase, PFAM = PF00560;PF13855;PF13855)' T '30.2.7' 'signalling.receptor kinases.leucine rich repeat VII' 'nbv0.3scaffold87007_1-2656' '(at1g12460 : 518.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT1G62950.1); Has 167349 Blast hits to 109630 proteins in 4084 species: Archae - 101; Bacteria - 12513; Metazoa - 51063; Fungi - 7396; Plants - 77075; Viruses - 193; Other Eukaryotes - 19008 (source: NCBI BLink). & (p93194|rpk1_iponi : 193.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35693 : 114.0) no description available & (reliability: 1036.0) & (original description: Putative At1g12460, Description = Putative LRR receptor-like serine/threonine-protein kinase, PFAM = PF00560;PF13855;PF08263)' T '30.2.7' 'signalling.receptor kinases.leucine rich repeat VII' 'nbv0.3scaffold90401_1-2481' '(at3g28040 : 459.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G56370.1); Has 223464 Blast hits to 137757 proteins in 4468 species: Archae - 159; Bacteria - 21919; Metazoa - 74524; Fungi - 10664; Plants - 90017; Viruses - 245; Other Eukaryotes - 25936 (source: NCBI BLink). & (p93194|rpk1_iponi : 154.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 105.0) no description available & (reliability: 918.0) & (original description: Putative PXC2, Description = Probably inactive leucine-rich repeat receptor-like protein kinase, PFAM = PF12799;PF08263;PF13855;PF13855;PF00560;PF13516;PF13516)' T '30.2.7' 'signalling.receptor kinases.leucine rich repeat VII' 'nbv0.3scaffold93463_3080-4907' '(at1g12460 : 439.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT1G62950.1); Has 167349 Blast hits to 109630 proteins in 4084 species: Archae - 101; Bacteria - 12513; Metazoa - 51063; Fungi - 7396; Plants - 77075; Viruses - 193; Other Eukaryotes - 19008 (source: NCBI BLink). & (gnl|cdd|36401 : 250.0) no description available & (q8l4h4|nork_medtr : 159.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 123.0) no description available & (reliability: 878.0) & (original description: Putative IRK, Description = Putative LRR receptor-like serine/threonine-protein kinase At1g12460 family, PFAM = PF07714)' T '30.2.7' 'signalling.receptor kinases.leucine rich repeat VII' 'nbv0.5scaffold3524_82925-86523' '(at5g20480 : 150.0) Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.; EF-TU receptor (EFR); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47090.1); Has 211073 Blast hits to 132033 proteins in 4602 species: Archae - 167; Bacteria - 19808; Metazoa - 69159; Fungi - 9873; Plants - 87247; Viruses - 333; Other Eukaryotes - 24486 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 132.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35665 : 91.6) no description available & (reliability: 282.0) & (original description: Putative PGSC0003DMG400007611, Description = Non-specific serine/threonine protein kinase, PFAM = PF08263;PF13855;PF13855)' T '30.2.7' 'signalling.receptor kinases.leucine rich repeat VII' 'nbv0.5scaffold5712_8022-34780' '(at5g46330 : 160.0) Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB.; FLAGELLIN-SENSITIVE 2 (FLS2); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 147.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 107.0) no description available & (reliability: 302.0) & (original description: Putative PGSC0003DMG400001016, Description = Non-specific serine/threonine protein kinase, PFAM = PF00560;PF13855;PF13855)' T '30.2.7' 'signalling.receptor kinases.leucine rich repeat VII' 'niben044scf00004388ctg037_425-3909' '(at3g24240 : 134.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT5G48940.1); Has 246558 Blast hits to 135557 proteins in 3810 species: Archae - 176; Bacteria - 24262; Metazoa - 71588; Fungi - 10499; Plants - 111580; Viruses - 361; Other Eukaryotes - 28092 (source: NCBI BLink). & (p93194|rpk1_iponi : 129.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 94.3) no description available & (reliability: 266.0) & (original description: Putative PGSC0003DMG400001016, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF13516)' T '30.2.7' 'signalling.receptor kinases.leucine rich repeat VII' 'niben044scf00006598ctg021_2097-7632' '(at1g75640 : 1135.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT4G36180.1); Has 252963 Blast hits to 139481 proteins in 4227 species: Archae - 190; Bacteria - 23104; Metazoa - 78698; Fungi - 11188; Plants - 110092; Viruses - 401; Other Eukaryotes - 29290 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 320.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 258.0) no description available & (gnl|cdd|84488 : 144.0) no description available & (reliability: 2270.0) & (original description: Putative At4g36180, Description = Probable LRR receptor-like serine/threonine-protein kinase At4g36180, PFAM = PF00560;PF08263;PF00069;PF13855;PF13855;PF13855;PF13855)' T '30.2.7' 'signalling.receptor kinases.leucine rich repeat VII' 'niben044scf00031792ctg000_1-2723' '(at2g25470 : 207.0) receptor like protein 21 (RLP21); INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: hypocotyl; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 14 (TAIR:AT1G74180.1); Has 123339 Blast hits to 32686 proteins in 1192 species: Archae - 50; Bacteria - 9219; Metazoa - 30627; Fungi - 1506; Plants - 72809; Viruses - 37; Other Eukaryotes - 9091 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 174.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35665 : 98.6) no description available & (reliability: 382.0) & (original description: Putative PGSC0003DMG400023396, Description = Leucine-rich repeat receptor protein kinase EXS, putative, PFAM = PF13855;PF13855;PF13855)' T '30.2.7' 'signalling.receptor kinases.leucine rich repeat VII' 'niben044scf00034380ctg000_21233-26607' '(at4g36180 : 1301.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT1G75640.1); Has 274404 Blast hits to 147338 proteins in 4291 species: Archae - 207; Bacteria - 28458; Metazoa - 89754; Fungi - 12028; Plants - 112070; Viruses - 470; Other Eukaryotes - 31417 (source: NCBI BLink). & (p93194|rpk1_iponi : 272.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 261.0) no description available & (gnl|cdd|29142 : 144.0) no description available & (reliability: 2602.0) & (original description: Putative At4g36180, Description = Probable LRR receptor-like serine/threonine-protein kinase At4g36180, PFAM = PF13516;PF13516;PF00069;PF00560;PF13855;PF13855;PF13855;PF08263)' T '30.2.7' 'signalling.receptor kinases.leucine rich repeat VII' 'niben101scf00152_619451-622015' '(at4g36180 : 87.4) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT1G75640.1); Has 274404 Blast hits to 147338 proteins in 4291 species: Archae - 207; Bacteria - 28458; Metazoa - 89754; Fungi - 12028; Plants - 112070; Viruses - 470; Other Eukaryotes - 31417 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative At1g25320, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF00560)' T '30.2.7' 'signalling.receptor kinases.leucine rich repeat VII' 'niben101scf00168_377573-379315' '(at3g56100 : 91.7) Protein kinase expressed in meristematic cells. Phosphorylates AGL24.; meristematic receptor-like kinase (MRLK); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: inflorescence meristem receptor-like kinase 2 (TAIR:AT3G51740.1); Has 154347 Blast hits to 110289 proteins in 3296 species: Archae - 124; Bacteria - 13554; Metazoa - 45622; Fungi - 8090; Plants - 69121; Viruses - 344; Other Eukaryotes - 17492 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative PGSC0003DMG400005590, Description = Receptor like protein 15, putative, PFAM = PF00560;PF00560)' T '30.2.7' 'signalling.receptor kinases.leucine rich repeat VII' 'niben101scf00270_767574-773193' '(at3g28040 : 1062.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G56370.1); Has 223464 Blast hits to 137757 proteins in 4468 species: Archae - 159; Bacteria - 21919; Metazoa - 74524; Fungi - 10664; Plants - 90017; Viruses - 245; Other Eukaryotes - 25936 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 278.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 254.0) no description available & (gnl|cdd|84488 : 155.0) no description available & (reliability: 2124.0) & (original description: Putative At3g28040, Description = Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040, PFAM = PF13855;PF13855;PF13855;PF00069;PF08263;PF12799)' T '30.2.7' 'signalling.receptor kinases.leucine rich repeat VII' 'niben101scf00773_338822-344390' '(at3g56370 : 1082.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G01890.1); Has 218234 Blast hits to 138588 proteins in 4594 species: Archae - 166; Bacteria - 19582; Metazoa - 73931; Fungi - 10568; Plants - 87830; Viruses - 425; Other Eukaryotes - 25732 (source: NCBI BLink). & (gnl|cdd|36401 : 239.0) no description available & (p93194|rpk1_iponi : 238.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|87344 : 157.0) no description available & (reliability: 2164.0) & (original description: Putative IRK, Description = Probable LRR receptor-like serine/threonine-protein kinase IRK, PFAM = PF07714;PF00560;PF00560;PF00560;PF13855;PF13855;PF08263)' T '30.2.7' 'signalling.receptor kinases.leucine rich repeat VII' 'niben101scf01203_234711-239829' '(at5g45800 : 660.0) maternal effect embryo arrest 62 (MEE62); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, embryo development ending in seed dormancy; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G24230.1); Has 86435 Blast hits to 54726 proteins in 1691 species: Archae - 65; Bacteria - 6179; Metazoa - 19674; Fungi - 1594; Plants - 54067; Viruses - 116; Other Eukaryotes - 4740 (source: NCBI BLink). & (gnl|cdd|36401 : 224.0) no description available & (q8lpb4|pskr_dauca : 142.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|88314 : 115.0) no description available & (reliability: 1320.0) & (original description: Putative Os06g0544100, Description = Os06g0544100 protein, PFAM = PF13855;PF07714)' T '30.2.7' 'signalling.receptor kinases.leucine rich repeat VII' 'niben101scf01205_228264-233698' '(at1g75640 : 1132.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT4G36180.1); Has 252963 Blast hits to 139481 proteins in 4227 species: Archae - 190; Bacteria - 23104; Metazoa - 78698; Fungi - 11188; Plants - 110092; Viruses - 401; Other Eukaryotes - 29290 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 314.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 261.0) no description available & (gnl|cdd|84488 : 146.0) no description available & (reliability: 2264.0) & (original description: Putative At4g36180, Description = Probable LRR receptor-like serine/threonine-protein kinase At4g36180, PFAM = PF13855;PF13855;PF13855;PF00069;PF00560;PF00560;PF08263)' T '30.2.7' 'signalling.receptor kinases.leucine rich repeat VII' 'niben101scf02862_35623-43220' '(at4g36180 : 1276.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT1G75640.1); Has 274404 Blast hits to 147338 proteins in 4291 species: Archae - 207; Bacteria - 28458; Metazoa - 89754; Fungi - 12028; Plants - 112070; Viruses - 470; Other Eukaryotes - 31417 (source: NCBI BLink). & (p93194|rpk1_iponi : 300.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 255.0) no description available & (gnl|cdd|29142 : 137.0) no description available & (reliability: 2552.0) & (original description: Putative At4g36180, Description = Probable LRR receptor-like serine/threonine-protein kinase At4g36180, PFAM = PF13855;PF13855;PF13855;PF00069;PF13516;PF13516;PF13516;PF00560;PF08263)' T '30.2.7' 'signalling.receptor kinases.leucine rich repeat VII' 'niben101scf03262_283839-288394' '(at2g24230 : 1069.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G58150.1); Has 160590 Blast hits to 111718 proteins in 3143 species: Archae - 143; Bacteria - 16976; Metazoa - 54491; Fungi - 7303; Plants - 65091; Viruses - 227; Other Eukaryotes - 16359 (source: NCBI BLink). & (gnl|cdd|36401 : 273.0) no description available & (q8lpb4|pskr_dauca : 270.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 139.0) no description available & (reliability: 2138.0) & (original description: Putative At2g24230, Description = Probable LRR receptor-like serine/threonine-protein kinase At2g24230, PFAM = PF13516;PF13516;PF13855;PF13855;PF07714)' T '30.2.7' 'signalling.receptor kinases.leucine rich repeat VII' 'niben101scf04334_147142-152717' '(at4g36180 : 1212.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT1G75640.1); Has 274404 Blast hits to 147338 proteins in 4291 species: Archae - 207; Bacteria - 28458; Metazoa - 89754; Fungi - 12028; Plants - 112070; Viruses - 470; Other Eukaryotes - 31417 (source: NCBI BLink). & (p93194|rpk1_iponi : 288.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 261.0) no description available & (gnl|cdd|29142 : 137.0) no description available & (reliability: 2424.0) & (original description: Putative PGSC0003DMG400022565, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF13855;PF13855;PF13855;PF00069;PF08263)' T '30.2.7' 'signalling.receptor kinases.leucine rich repeat VII' 'niben101scf04609_38487-154850' '(at5g46330 : 158.0) Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB.; FLAGELLIN-SENSITIVE 2 (FLS2); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 139.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 108.0) no description available & (reliability: 288.0) & (original description: Putative PGSC0003DMG400004164, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF13855;PF00560)' T '30.2.7' 'signalling.receptor kinases.leucine rich repeat VII' 'niben101scf05977_144758-149173' '(at1g12460 : 1073.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT1G62950.1); Has 167349 Blast hits to 109630 proteins in 4084 species: Archae - 101; Bacteria - 12513; Metazoa - 51063; Fungi - 7396; Plants - 77075; Viruses - 193; Other Eukaryotes - 19008 (source: NCBI BLink). & (p93194|rpk1_iponi : 314.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 260.0) no description available & (gnl|cdd|87344 : 134.0) no description available & (reliability: 2146.0) & (original description: Putative At1g12460, Description = Probable LRR receptor-like serine/threonine-protein kinase At1g12460, PFAM = PF13855;PF13855;PF08263;PF00069)' T '30.2.7' 'signalling.receptor kinases.leucine rich repeat VII' 'niben101scf06603_203761-208852' '(at3g56370 : 1001.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G01890.1); Has 218234 Blast hits to 138588 proteins in 4594 species: Archae - 166; Bacteria - 19582; Metazoa - 73931; Fungi - 10568; Plants - 87830; Viruses - 425; Other Eukaryotes - 25732 (source: NCBI BLink). & (p93194|rpk1_iponi : 323.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 238.0) no description available & (gnl|cdd|88314 : 158.0) no description available & (reliability: 2002.0) & (original description: Putative IRK, Description = Probable LRR receptor-like serine/threonine-protein kinase IRK, PFAM = PF12799;PF13855;PF13855;PF13855;PF13516;PF13516;PF08263;PF07714)' T '30.2.7' 'signalling.receptor kinases.leucine rich repeat VII' 'niben101scf06909_180257-185414' '(at3g56370 : 1045.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G01890.1); Has 218234 Blast hits to 138588 proteins in 4594 species: Archae - 166; Bacteria - 19582; Metazoa - 73931; Fungi - 10568; Plants - 87830; Viruses - 425; Other Eukaryotes - 25732 (source: NCBI BLink). & (p93194|rpk1_iponi : 353.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 239.0) no description available & (gnl|cdd|87344 : 155.0) no description available & (reliability: 2090.0) & (original description: Putative IRK, Description = Probable LRR receptor-like serine/threonine-protein kinase IRK, PFAM = PF08263;PF13516;PF13855;PF13855;PF12799;PF07714;PF00560)' T '30.2.7' 'signalling.receptor kinases.leucine rich repeat VII' 'niben101scf12866_59404-62225' '(at2g25790 : 131.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT4G28650.1); Has 153683 Blast hits to 57628 proteins in 1967 species: Archae - 59; Bacteria - 14832; Metazoa - 38909; Fungi - 1966; Plants - 84929; Viruses - 21; Other Eukaryotes - 12967 (source: NCBI BLink). & (p93194|rpk1_iponi : 108.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 92.4) no description available & (reliability: 244.0) & (original description: Putative BnaCnng18680D, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF13855)' T '30.2.7' 'signalling.receptor kinases.leucine rich repeat VII' 'niben101scf15916_8027-13389' '(at3g56370 : 989.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G01890.1); Has 218234 Blast hits to 138588 proteins in 4594 species: Archae - 166; Bacteria - 19582; Metazoa - 73931; Fungi - 10568; Plants - 87830; Viruses - 425; Other Eukaryotes - 25732 (source: NCBI BLink). & (gnl|cdd|36401 : 238.0) no description available & (p93194|rpk1_iponi : 192.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|87344 : 156.0) no description available & (reliability: 1978.0) & (original description: Putative IRK, Description = Probable LRR receptor-like serine/threonine-protein kinase IRK, PFAM = PF13516;PF07714;PF13855;PF13855;PF13855;PF08263)' T '30.2.8' 'signalling.receptor kinases.leucine rich repeat VIII' '' '' '30.2.8.1' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-1' 'nbv0.3scaffold352_126087-131728' '(gnl|cdd|36401 : 167.0) no description available & (at1g24030 : 117.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 120365 Blast hits to 119013 proteins in 4490 species: Archae - 114; Bacteria - 14164; Metazoa - 43937; Fungi - 10244; Plants - 33641; Viruses - 447; Other Eukaryotes - 17818 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 103.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 86.0) no description available & (reliability: 232.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF07714;PF00069)' T '30.2.8.1' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-1' 'nbv0.3scaffold21582_20547-29158' '(at5g49760 : 941.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G49770.1); Has 176974 Blast hits to 136078 proteins in 4850 species: Archae - 147; Bacteria - 18062; Metazoa - 52743; Fungi - 11116; Plants - 72814; Viruses - 462; Other Eukaryotes - 21630 (source: NCBI BLink). & (gnl|cdd|36401 : 355.0) no description available & (q8lkz1|nork_pea : 249.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 182.0) no description available & (reliability: 1882.0) & (original description: Putative Sb09g006630, Description = Putative uncharacterized protein Sb09g006630, PFAM = PF07714)' T '30.2.8.1' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-1' 'nbv0.3scaffold24010_8571-20366' '(at1g06840 : 887.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G01950.1); Has 194453 Blast hits to 138780 proteins in 4845 species: Archae - 155; Bacteria - 17954; Metazoa - 60073; Fungi - 10970; Plants - 82493; Viruses - 385; Other Eukaryotes - 22423 (source: NCBI BLink). & (gnl|cdd|36401 : 333.0) no description available & (q8l4h4|nork_medtr : 225.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 181.0) no description available & (reliability: 1774.0) & (original description: Putative At1g06840, Description = Probable LRR receptor-like serine/threonine-protein kinase At1g06840, PFAM = PF08263;PF07714)' T '30.2.8.1' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-1' 'nbv0.3scaffold25662_4991-16238' '(at1g06840 : 661.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G01950.1); Has 194453 Blast hits to 138780 proteins in 4845 species: Archae - 155; Bacteria - 17954; Metazoa - 60073; Fungi - 10970; Plants - 82493; Viruses - 385; Other Eukaryotes - 22423 (source: NCBI BLink). & (gnl|cdd|36401 : 338.0) no description available & (q8l4h4|nork_medtr : 234.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 178.0) no description available & (reliability: 1322.0) & (original description: Putative In29, Description = Leucine-rich repeat transmembrane protein kinase, PFAM = PF00069)' T '30.2.8.1' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-1' 'nbv0.5scaffold3050_93107-102410' '(at5g49760 : 994.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G49770.1); Has 176974 Blast hits to 136078 proteins in 4850 species: Archae - 147; Bacteria - 18062; Metazoa - 52743; Fungi - 11116; Plants - 72814; Viruses - 462; Other Eukaryotes - 21630 (source: NCBI BLink). & (gnl|cdd|36401 : 355.0) no description available & (q8lkz1|nork_pea : 249.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 182.0) no description available & (reliability: 1988.0) & (original description: Putative At5g49770, Description = Probable leucine-rich repeat receptor-like protein kinase At5g49770, PFAM = PF07714)' T '30.2.8.1' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-1' 'nbv0.5scaffold3483_195581-218648' '(at5g01950 : 1055.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G06840.1); Has 195622 Blast hits to 137374 proteins in 5075 species: Archae - 144; Bacteria - 18537; Metazoa - 60927; Fungi - 10261; Plants - 82888; Viruses - 345; Other Eukaryotes - 22520 (source: NCBI BLink). & (gnl|cdd|36401 : 340.0) no description available & (q8l4h4|nork_medtr : 229.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 185.0) no description available & (reliability: 2110.0) & (original description: Putative At3g53590, Description = Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At3g53590, PFAM = PF08263;PF07714)' T '30.2.8.1' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-1' 'niben044scf00000795ctg003_210-21416' '(at5g49760 : 997.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G49770.1); Has 176974 Blast hits to 136078 proteins in 4850 species: Archae - 147; Bacteria - 18062; Metazoa - 52743; Fungi - 11116; Plants - 72814; Viruses - 462; Other Eukaryotes - 21630 (source: NCBI BLink). & (gnl|cdd|36401 : 361.0) no description available & (q8l4h4|nork_medtr : 253.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 184.0) no description available & (reliability: 1994.0) & (original description: Putative At5g49770, Description = Probable leucine-rich repeat receptor-like protein kinase At5g49770, PFAM = PF07714)' T '30.2.8.1' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-1' 'niben044scf00000795ctg003_5700-20403' '(at1g79620 : 243.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G49760.1); Has 173131 Blast hits to 132948 proteins in 4769 species: Archae - 163; Bacteria - 18653; Metazoa - 51943; Fungi - 10632; Plants - 70309; Viruses - 438; Other Eukaryotes - 20993 (source: NCBI BLink). & (gnl|cdd|36401 : 224.0) no description available & (q8l4h4|nork_medtr : 157.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 139.0) no description available & (reliability: 486.0) & (original description: Putative In29, Description = Putative leucine-rich repeat receptor-like protein kinase, PFAM = PF07714)' T '30.2.8.1' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-1' 'niben044scf00005698ctg028_1888-7707' '(gnl|cdd|36401 : 167.0) no description available & (at1g24030 : 117.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 120365 Blast hits to 119013 proteins in 4490 species: Archae - 114; Bacteria - 14164; Metazoa - 43937; Fungi - 10244; Plants - 33641; Viruses - 447; Other Eukaryotes - 17818 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 105.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47550 : 87.6) no description available & (reliability: 228.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF07714;PF00069)' T '30.2.8.1' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-1' 'niben044scf00006751ctg000_8261-19620' '(at5g01950 : 361.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G06840.1); Has 195622 Blast hits to 137374 proteins in 5075 species: Archae - 144; Bacteria - 18537; Metazoa - 60927; Fungi - 10261; Plants - 82888; Viruses - 345; Other Eukaryotes - 22520 (source: NCBI BLink). & (reliability: 722.0) & (original description: Putative At1g06840, Description = Putative LRR receptor-like serine/threonine-protein kinase, PFAM = PF08263)' T '30.2.8.1' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-1' 'niben044scf00006751ctg007_1-3738' '(at1g06840 : 501.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G01950.1); Has 194453 Blast hits to 138780 proteins in 4845 species: Archae - 155; Bacteria - 17954; Metazoa - 60073; Fungi - 10970; Plants - 82493; Viruses - 385; Other Eukaryotes - 22423 (source: NCBI BLink). & (gnl|cdd|36401 : 344.0) no description available & (q8lkz1|nork_pea : 238.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 184.0) no description available & (reliability: 1002.0) & (original description: Putative In29, Description = Leucine-rich repeat transmembrane protein kinase, PFAM = PF07714)' T '30.2.8.1' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-1' 'niben044scf00014113ctg008_1-2812' '(at1g06840 : 132.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G01950.1); Has 194453 Blast hits to 138780 proteins in 4845 species: Archae - 155; Bacteria - 17954; Metazoa - 60073; Fungi - 10970; Plants - 82493; Viruses - 385; Other Eukaryotes - 22423 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative At1g06840, Description = Putative LRR receptor-like serine/threonine-protein kinase, PFAM = )' T '30.2.8.1' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-1' 'niben044scf00055094ctg003_1-2447' '(gnl|cdd|36401 : 195.0) no description available & (at1g79620 : 134.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G49760.1); Has 173131 Blast hits to 132948 proteins in 4769 species: Archae - 163; Bacteria - 18653; Metazoa - 51943; Fungi - 10632; Plants - 70309; Viruses - 438; Other Eukaryotes - 20993 (source: NCBI BLink). & (q8l4h4|nork_medtr : 117.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 109.0) no description available & (reliability: 268.0) & (original description: Putative At3g26700, Description = Putative leucine-rich repeat receptor-like protein kinase, PFAM = PF07714)' T '30.2.8.1' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-1' 'niben101scf00177_911277-919523' '(gnl|cdd|36401 : 267.0) no description available & (at5g40380 : 194.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (CRK42); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (TAIR:AT1G70530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29142 : 172.0) no description available & (o24585|cri4_maize : 158.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 362.0) & (original description: Putative Sb08g000610, Description = Putative uncharacterized protein Sb08g000610, PFAM = PF00069)' T '30.2.8.1' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-1' 'niben101scf03021_27175-42332' '(at1g79620 : 868.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G49760.1); Has 173131 Blast hits to 132948 proteins in 4769 species: Archae - 163; Bacteria - 18653; Metazoa - 51943; Fungi - 10632; Plants - 70309; Viruses - 438; Other Eukaryotes - 20993 (source: NCBI BLink). & (gnl|cdd|36401 : 347.0) no description available & (q8l4h4|nork_medtr : 211.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 186.0) no description available & (reliability: 1736.0) & (original description: Putative At5g49770, Description = Probable leucine-rich repeat receptor-like protein kinase At5g49770, PFAM = PF07714)' T '30.2.8.1' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-1' 'niben101scf03021_30355-120806' '(at1g79620 : 252.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G49760.1); Has 173131 Blast hits to 132948 proteins in 4769 species: Archae - 163; Bacteria - 18653; Metazoa - 51943; Fungi - 10632; Plants - 70309; Viruses - 438; Other Eukaryotes - 20993 (source: NCBI BLink). & (gnl|cdd|36401 : 221.0) no description available & (q8l4h4|nork_medtr : 157.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 136.0) no description available & (reliability: 504.0) & (original description: Putative In29, Description = Putative leucine-rich repeat receptor-like protein kinase, PFAM = PF07714)' T '30.2.8.1' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-1' 'niben101scf03021_34393-42281' '(at1g79620 : 345.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G49760.1); Has 173131 Blast hits to 132948 proteins in 4769 species: Archae - 163; Bacteria - 18653; Metazoa - 51943; Fungi - 10632; Plants - 70309; Viruses - 438; Other Eukaryotes - 20993 (source: NCBI BLink). & (p93194|rpk1_iponi : 115.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 690.0) & (original description: Putative MpRLK15, Description = Putative leucine-rich repeat receptor-like protein kinase, PFAM = )' T '30.2.8.1' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-1' 'niben101scf03534_51831-55923' '(gnl|cdd|36401 : 273.0) no description available & (at4g02010 : 199.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G20300.1); Has 117558 Blast hits to 116281 proteins in 4412 species: Archae - 107; Bacteria - 13740; Metazoa - 43399; Fungi - 9953; Plants - 33036; Viruses - 373; Other Eukaryotes - 16950 (source: NCBI BLink). & (q8l4h4|nork_medtr : 191.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47550 : 155.0) no description available & (reliability: 364.0) & (original description: Putative pto, Description = Putative receptor-like protein kinase, PFAM = PF00069)' T '30.2.8.1' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-1' 'niben101scf05011_191154-200025' '(at1g79620 : 1391.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G49760.1); Has 173131 Blast hits to 132948 proteins in 4769 species: Archae - 163; Bacteria - 18653; Metazoa - 51943; Fungi - 10632; Plants - 70309; Viruses - 438; Other Eukaryotes - 20993 (source: NCBI BLink). & (gnl|cdd|36401 : 357.0) no description available & (q8l4h4|nork_medtr : 253.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 174.0) no description available & (reliability: 2782.0) & (original description: Putative At5g49770, Description = Probable leucine-rich repeat receptor-like protein kinase At5g49770, PFAM = PF08263;PF07714;PF13855)' T '30.2.8.1' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-1' 'niben101scf07893_67412-72951' '(gnl|cdd|36401 : 124.0) no description available & (at1g79620 : 80.9) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G49760.1); Has 173131 Blast hits to 132948 proteins in 4769 species: Archae - 163; Bacteria - 18653; Metazoa - 51943; Fungi - 10632; Plants - 70309; Viruses - 438; Other Eukaryotes - 20993 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF00069;PF07714)' T '30.2.8.1' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-1' 'niben101scf09906_222092-257566' '(at1g06840 : 890.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G01950.1); Has 194453 Blast hits to 138780 proteins in 4845 species: Archae - 155; Bacteria - 17954; Metazoa - 60073; Fungi - 10970; Plants - 82493; Viruses - 385; Other Eukaryotes - 22423 (source: NCBI BLink). & (gnl|cdd|36401 : 340.0) no description available & (q8l4h4|nork_medtr : 230.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 181.0) no description available & (reliability: 1780.0) & (original description: Putative PGSC0003DMG400031228, Description = Putative LRR receptor-like serine/threonine-protein kinase, PFAM = PF00069;PF08263)' T '30.2.8.1' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-1' 'niben101scf09906_269976-282630' '(at5g01950 : 1038.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G06840.1); Has 195622 Blast hits to 137374 proteins in 5075 species: Archae - 144; Bacteria - 18537; Metazoa - 60927; Fungi - 10261; Plants - 82888; Viruses - 345; Other Eukaryotes - 22520 (source: NCBI BLink). & (gnl|cdd|36401 : 337.0) no description available & (q8l4h4|nork_medtr : 228.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 181.0) no description available & (reliability: 2076.0) & (original description: Putative At1g06840, Description = Probable LRR receptor-like serine/threonine-protein kinase At1g06840, PFAM = PF07714;PF08263)' T '30.2.8.1' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-1' 'niben101scf11560_20679-24959' '(gnl|cdd|36401 : 335.0) no description available & (at5g54380 : 253.0) Encodes THESEUS1 (THE1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth.; THESEUS1 (THE1); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: hercules receptor kinase 1 (TAIR:AT3G46290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8l4h4|nork_medtr : 232.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 154.0) no description available & (reliability: 476.0) & (original description: Putative ANX1, Description = Receptor-like protein kinase THESEUS 1, PFAM = PF00069)' T '30.2.8.1' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-1' 'niben101scf15604_2267-13248' '(at5g49760 : 804.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G49770.1); Has 176974 Blast hits to 136078 proteins in 4850 species: Archae - 147; Bacteria - 18062; Metazoa - 52743; Fungi - 11116; Plants - 72814; Viruses - 462; Other Eukaryotes - 21630 (source: NCBI BLink). & (gnl|cdd|36401 : 354.0) no description available & (o24585|cri4_maize : 229.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 192.0) no description available & (reliability: 1608.0) & (original description: Putative At5g49770, Description = Probable leucine-rich repeat receptor-like protein kinase At5g49770, PFAM = PF07714;PF08263)' T '30.2.8.1' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-1' 'niben101scf26330_53481-70511' '(at1g06840 : 1095.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G01950.1); Has 194453 Blast hits to 138780 proteins in 4845 species: Archae - 155; Bacteria - 17954; Metazoa - 60073; Fungi - 10970; Plants - 82493; Viruses - 385; Other Eukaryotes - 22423 (source: NCBI BLink). & (gnl|cdd|36401 : 352.0) no description available & (q8lkz1|nork_pea : 212.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 183.0) no description available & (reliability: 2190.0) & (original description: Putative At1g06840, Description = Probable LRR receptor-like serine/threonine-protein kinase At1g06840, PFAM = PF07714;PF08263)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'nbv0.3scaffold11769_2540-7765' '(at3g09010 : 492.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G16670.1); Has 118495 Blast hits to 117144 proteins in 4669 species: Archae - 109; Bacteria - 13491; Metazoa - 44039; Fungi - 9996; Plants - 33355; Viruses - 385; Other Eukaryotes - 17120 (source: NCBI BLink). & (gnl|cdd|36401 : 370.0) no description available & (q8lkz1|nork_pea : 204.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 181.0) no description available & (reliability: 984.0) & (original description: Putative BnaC03g36260D, Description = BnaC03g36260D protein, PFAM = PF07714)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'nbv0.3scaffold12936_2702-16458' '(at1g53440 : 1174.0) Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G53430.1); Has 190921 Blast hits to 136069 proteins in 4848 species: Archae - 114; Bacteria - 18757; Metazoa - 52699; Fungi - 11122; Plants - 85531; Viruses - 458; Other Eukaryotes - 22240 (source: NCBI BLink). & (gnl|cdd|36401 : 359.0) no description available & (q8l4h4|nork_medtr : 239.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 180.0) no description available & (reliability: 2348.0) & (original description: Putative At1g53430, Description = Probable LRR receptor-like serine/threonine-protein kinase At1g53430, PFAM = PF11721;PF07714;PF00560;PF00560)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'nbv0.3scaffold19741_6743-9989' '(at1g16670 : 303.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G09010.1); Has 119178 Blast hits to 117668 proteins in 4361 species: Archae - 113; Bacteria - 13232; Metazoa - 43958; Fungi - 10262; Plants - 33662; Viruses - 406; Other Eukaryotes - 17545 (source: NCBI BLink). & (gnl|cdd|36401 : 243.0) no description available & (q8l4h4|nork_medtr : 156.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 132.0) no description available & (reliability: 606.0) & (original description: Putative At1g16670, Description = Receptor-like kinase, PFAM = PF00069)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'nbv0.3scaffold34924_1638-10487' '(at1g56130 : 462.0) Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G56140.1); Has 183160 Blast hits to 131873 proteins in 4617 species: Archae - 129; Bacteria - 16542; Metazoa - 50297; Fungi - 10850; Plants - 82984; Viruses - 436; Other Eukaryotes - 21922 (source: NCBI BLink). & (p93194|rpk1_iponi : 131.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 924.0) & (original description: Putative BnaC06g31350D, Description = BnaC06g31350D protein, PFAM = PF13855;PF11721)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'nbv0.3scaffold45383_5280-11225' '(gnl|cdd|36401 : 349.0) no description available & (at1g56140 : 341.0) Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G56130.1); Has 186029 Blast hits to 134018 proteins in 4752 species: Archae - 143; Bacteria - 15786; Metazoa - 51681; Fungi - 11229; Plants - 84240; Viruses - 441; Other Eukaryotes - 22509 (source: NCBI BLink). & (q8l4h4|nork_medtr : 210.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 172.0) no description available & (reliability: 682.0) & (original description: Putative Os04g0658700, Description = OSJNBa0011F23.11 protein, PFAM = PF00069)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'nbv0.3scaffold46713_1-2367' '(at1g35710 : 137.0) Protein kinase family protein with leucine-rich repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT4G08850.1); Has 304074 Blast hits to 147448 proteins in 4766 species: Archae - 178; Bacteria - 29187; Metazoa - 106993; Fungi - 12531; Plants - 120860; Viruses - 430; Other Eukaryotes - 33895 (source: NCBI BLink). & (p93194|rpk1_iponi : 128.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 91.6) no description available & (reliability: 252.0) & (original description: Putative PGSC0003DMG400004164, Description = Non-specific serine/threonine protein kinase, PFAM = PF00560;PF13855;PF13855)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'nbv0.3scaffold49733_1896-12545' '(at1g07650 : 912.0) Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G53430.1). & (gnl|cdd|36401 : 368.0) no description available & (q8l4h4|nork_medtr : 233.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 178.0) no description available & (reliability: 1824.0) & (original description: Putative At1g53420, Description = Probable LRR receptor-like serine/threonine-protein kinase At1g53420, PFAM = PF11721;PF07714)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'nbv0.5scaffold77_758103-770587' '(at1g07650 : 1275.0) Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G53430.1). & (gnl|cdd|36401 : 359.0) no description available & (q8l4h4|nork_medtr : 242.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|88314 : 186.0) no description available & (reliability: 2550.0) & (original description: Putative At1g07650, Description = Probable LRR receptor-like serine/threonine-protein kinase At1g07650, PFAM = PF13855;PF13855;PF11721;PF07714)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'nbv0.5scaffold115_532303-547134' '(at3g09010 : 402.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G16670.1); Has 118495 Blast hits to 117144 proteins in 4669 species: Archae - 109; Bacteria - 13491; Metazoa - 44039; Fungi - 9996; Plants - 33355; Viruses - 385; Other Eukaryotes - 17120 (source: NCBI BLink). & (gnl|cdd|36401 : 360.0) no description available & (q8lpb4|pskr_dauca : 220.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 182.0) no description available & (reliability: 804.0) & (original description: Putative Os04g0679200, Description = OSJNBb0017I01.6 protein, PFAM = PF00069)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'nbv0.5scaffold1810_347604-362838' '(at1g29750 : 1099.0) Receptor-like serine/threonine kinase (RKF1). The putative extracellular domain of the RKF1 protein contains 13 tandem repeats of leucine-rich sequences. Expressed in early flower primordial, stamen, and pollen grains.; receptor-like kinase in flowers 1 (RKF1); FUNCTIONS IN: protein serine/threonine kinase activity, receptor signaling protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT3G14840.2); Has 173330 Blast hits to 127712 proteins in 4547 species: Archae - 123; Bacteria - 16375; Metazoa - 48014; Fungi - 10256; Plants - 77963; Viruses - 389; Other Eukaryotes - 20210 (source: NCBI BLink). & (gnl|cdd|36401 : 362.0) no description available & (q8l4h4|nork_medtr : 208.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 180.0) no description available & (reliability: 2198.0) & (original description: Putative RKF1, Description = Probable LRR receptor-like serine/threonine-protein kinase RFK1, PFAM = PF07714;PF11721)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'nbv0.5scaffold6622_72487-76690' '(at1g16670 : 262.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G09010.1); Has 119178 Blast hits to 117668 proteins in 4361 species: Archae - 113; Bacteria - 13232; Metazoa - 43958; Fungi - 10262; Plants - 33662; Viruses - 406; Other Eukaryotes - 17545 (source: NCBI BLink). & (gnl|cdd|36401 : 261.0) no description available & (o24585|cri4_maize : 157.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 121.0) no description available & (reliability: 524.0) & (original description: Putative Os12g0611100, Description = Os12g0611100 protein, PFAM = PF00069)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'niben044scf00008700ctg003_1-8553' '(at1g29750 : 439.0) Receptor-like serine/threonine kinase (RKF1). The putative extracellular domain of the RKF1 protein contains 13 tandem repeats of leucine-rich sequences. Expressed in early flower primordial, stamen, and pollen grains.; receptor-like kinase in flowers 1 (RKF1); FUNCTIONS IN: protein serine/threonine kinase activity, receptor signaling protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT3G14840.2); Has 173330 Blast hits to 127712 proteins in 4547 species: Archae - 123; Bacteria - 16375; Metazoa - 48014; Fungi - 10256; Plants - 77963; Viruses - 389; Other Eukaryotes - 20210 (source: NCBI BLink). & (p93194|rpk1_iponi : 123.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 878.0) & (original description: Putative RKF1, Description = LRR receptor-like kinase, PFAM = PF13855)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'niben044scf00008700ctg008_1496-4825' '(at1g29750 : 435.0) Receptor-like serine/threonine kinase (RKF1). The putative extracellular domain of the RKF1 protein contains 13 tandem repeats of leucine-rich sequences. Expressed in early flower primordial, stamen, and pollen grains.; receptor-like kinase in flowers 1 (RKF1); FUNCTIONS IN: protein serine/threonine kinase activity, receptor signaling protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT3G14840.2); Has 173330 Blast hits to 127712 proteins in 4547 species: Archae - 123; Bacteria - 16375; Metazoa - 48014; Fungi - 10256; Plants - 77963; Viruses - 389; Other Eukaryotes - 20210 (source: NCBI BLink). & (gnl|cdd|36401 : 359.0) no description available & (q8l4h4|nork_medtr : 210.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 177.0) no description available & (reliability: 870.0) & (original description: Putative RKF1, Description = LRR receptor-like kinase, PFAM = PF07714;PF12330)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'niben044scf00012465ctg000_1243-12502' '(at3g09010 : 409.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G16670.1); Has 118495 Blast hits to 117144 proteins in 4669 species: Archae - 109; Bacteria - 13491; Metazoa - 44039; Fungi - 9996; Plants - 33355; Viruses - 385; Other Eukaryotes - 17120 (source: NCBI BLink). & (gnl|cdd|36401 : 355.0) no description available & (q8lpb4|pskr_dauca : 213.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 167.0) no description available & (reliability: 818.0) & (original description: Putative Os04g0679200, Description = OSJNBb0017I01.6 protein, PFAM = PF00069)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'niben044scf00014560ctg000_1116-4087' '(at1g07650 : 123.0) Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G53430.1). & (reliability: 246.0) & (original description: Putative BnaA03g33570D, Description = Putative leucine-rich repeat receptor-like serine/threonine-protein kinase, PFAM = PF11721)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'niben044scf00040311ctg000_13914-21040' '(at1g29750 : 382.0) Receptor-like serine/threonine kinase (RKF1). The putative extracellular domain of the RKF1 protein contains 13 tandem repeats of leucine-rich sequences. Expressed in early flower primordial, stamen, and pollen grains.; receptor-like kinase in flowers 1 (RKF1); FUNCTIONS IN: protein serine/threonine kinase activity, receptor signaling protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT3G14840.2); Has 173330 Blast hits to 127712 proteins in 4547 species: Archae - 123; Bacteria - 16375; Metazoa - 48014; Fungi - 10256; Plants - 77963; Viruses - 389; Other Eukaryotes - 20210 (source: NCBI BLink). & (p93194|rpk1_iponi : 96.3) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 764.0) & (original description: Putative BnaC06g29580D, Description = BnaC06g29580D protein, PFAM = PF13855)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'niben044scf00056911ctg000_1-10367' '(at1g56130 : 772.0) Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G56140.1); Has 183160 Blast hits to 131873 proteins in 4617 species: Archae - 129; Bacteria - 16542; Metazoa - 50297; Fungi - 10850; Plants - 82984; Viruses - 436; Other Eukaryotes - 21922 (source: NCBI BLink). & (p93194|rpk1_iponi : 112.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35693 : 85.4) no description available & (reliability: 1544.0) & (original description: Putative BnaC06g31350D, Description = BnaC06g31350D protein, PFAM = PF13855;PF11721)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'niben101scf00120_243572-255483' '(at3g09010 : 388.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G16670.1); Has 118495 Blast hits to 117144 proteins in 4669 species: Archae - 109; Bacteria - 13491; Metazoa - 44039; Fungi - 9996; Plants - 33355; Viruses - 385; Other Eukaryotes - 17120 (source: NCBI BLink). & (gnl|cdd|36401 : 359.0) no description available & (q8lpb4|pskr_dauca : 209.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 179.0) no description available & (reliability: 776.0) & (original description: Putative Os04g0679200, Description = OSJNBb0017I01.6 protein, PFAM = PF00069)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'niben101scf00177_911277-919523' '(gnl|cdd|36401 : 267.0) no description available & (at5g40380 : 194.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (CRK42); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (TAIR:AT1G70530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29142 : 172.0) no description available & (o24585|cri4_maize : 158.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 372.0) & (original description: Putative Sb08g000610, Description = Putative uncharacterized protein Sb08g000610, PFAM = PF00069)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'niben101scf01002_842244-845768' '(at1g16670 : 295.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G09010.1); Has 119178 Blast hits to 117668 proteins in 4361 species: Archae - 113; Bacteria - 13232; Metazoa - 43958; Fungi - 10262; Plants - 33662; Viruses - 406; Other Eukaryotes - 17545 (source: NCBI BLink). & (gnl|cdd|36401 : 238.0) no description available & (q8l4h4|nork_medtr : 151.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 131.0) no description available & (reliability: 590.0) & (original description: Putative At1g16670, Description = Receptor-like kinase, PFAM = PF00069)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'niben101scf01218_91544-100495' '(at1g56140 : 426.0) Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G56130.1); Has 186029 Blast hits to 134018 proteins in 4752 species: Archae - 143; Bacteria - 15786; Metazoa - 51681; Fungi - 11229; Plants - 84240; Viruses - 441; Other Eukaryotes - 22509 (source: NCBI BLink). & (p93194|rpk1_iponi : 124.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 852.0) & (original description: Putative BnaC06g31350D, Description = BnaC06g31350D protein, PFAM = PF11721;PF13855)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'niben101scf01409_73493-79089' '(gnl|cdd|36401 : 344.0) no description available & (at1g56140 : 333.0) Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G56130.1); Has 186029 Blast hits to 134018 proteins in 4752 species: Archae - 143; Bacteria - 15786; Metazoa - 51681; Fungi - 11229; Plants - 84240; Viruses - 441; Other Eukaryotes - 22509 (source: NCBI BLink). & (q8l4h4|nork_medtr : 210.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 173.0) no description available & (reliability: 666.0) & (original description: Putative Os04g0658700, Description = OSJNBa0011F23.11 protein, PFAM = PF07714)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'niben101scf01519_108769-124037' '(at1g53440 : 1150.0) Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G53430.1); Has 190921 Blast hits to 136069 proteins in 4848 species: Archae - 114; Bacteria - 18757; Metazoa - 52699; Fungi - 11122; Plants - 85531; Viruses - 458; Other Eukaryotes - 22240 (source: NCBI BLink). & (gnl|cdd|36401 : 359.0) no description available & (q8l4h4|nork_medtr : 239.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 180.0) no description available & (reliability: 2300.0) & (original description: Putative At1g53430, Description = Probable LRR receptor-like serine/threonine-protein kinase At1g53430, PFAM = PF00560;PF00560;PF11721;PF07714)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'niben101scf02269_169517-174565' '(at3g09010 : 496.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G16670.1); Has 118495 Blast hits to 117144 proteins in 4669 species: Archae - 109; Bacteria - 13491; Metazoa - 44039; Fungi - 9996; Plants - 33355; Viruses - 385; Other Eukaryotes - 17120 (source: NCBI BLink). & (gnl|cdd|36401 : 359.0) no description available & (q8lkz1|nork_pea : 196.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 170.0) no description available & (reliability: 992.0) & (original description: Putative BnaC03g36260D, Description = BnaC03g36260D protein, PFAM = PF00069)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'niben101scf02357_883868-896352' '(at1g07650 : 1170.0) Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G53430.1). & (gnl|cdd|36401 : 290.0) no description available & (q8l4h4|nork_medtr : 189.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 134.0) no description available & (reliability: 2340.0) & (original description: Putative At1g07650, Description = Probable LRR receptor-like serine/threonine-protein kinase At1g07650, PFAM = PF13855;PF13855;PF00069;PF11721)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'niben101scf03534_51831-55923' '(gnl|cdd|36401 : 273.0) no description available & (at4g02010 : 199.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G20300.1); Has 117558 Blast hits to 116281 proteins in 4412 species: Archae - 107; Bacteria - 13740; Metazoa - 43399; Fungi - 9953; Plants - 33036; Viruses - 373; Other Eukaryotes - 16950 (source: NCBI BLink). & (q8l4h4|nork_medtr : 191.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47550 : 155.0) no description available & (reliability: 364.0) & (original description: Putative pto, Description = Putative receptor-like protein kinase, PFAM = PF00069)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'niben101scf05299_39171-46066' '(at4g21390 : 334.0) B120; FUNCTIONS IN: protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61610.1); Has 119638 Blast hits to 117946 proteins in 4361 species: Archae - 104; Bacteria - 13356; Metazoa - 43759; Fungi - 9937; Plants - 34742; Viruses - 415; Other Eukaryotes - 17325 (source: NCBI BLink). & (gnl|cdd|36401 : 334.0) no description available & (q8lkz1|nork_pea : 196.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 175.0) no description available & (reliability: 616.0) & (original description: Putative BnaA07g38960D, Description = BnaA07g38960D protein, PFAM = PF07714)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'niben101scf05412_118270-123777' '(at3g09010 : 487.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G16670.1); Has 118495 Blast hits to 117144 proteins in 4669 species: Archae - 109; Bacteria - 13491; Metazoa - 44039; Fungi - 9996; Plants - 33355; Viruses - 385; Other Eukaryotes - 17120 (source: NCBI BLink). & (gnl|cdd|36401 : 367.0) no description available & (q8lkz1|nork_pea : 207.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 184.0) no description available & (reliability: 974.0) & (original description: Putative At3g09010, Description = Protein kinase, PFAM = PF07714)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'niben101scf05948_3847-16181' '(at1g29750 : 1102.0) Receptor-like serine/threonine kinase (RKF1). The putative extracellular domain of the RKF1 protein contains 13 tandem repeats of leucine-rich sequences. Expressed in early flower primordial, stamen, and pollen grains.; receptor-like kinase in flowers 1 (RKF1); FUNCTIONS IN: protein serine/threonine kinase activity, receptor signaling protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT3G14840.2); Has 173330 Blast hits to 127712 proteins in 4547 species: Archae - 123; Bacteria - 16375; Metazoa - 48014; Fungi - 10256; Plants - 77963; Viruses - 389; Other Eukaryotes - 20210 (source: NCBI BLink). & (gnl|cdd|36401 : 363.0) no description available & (q8l4h4|nork_medtr : 230.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 177.0) no description available & (reliability: 2204.0) & (original description: Putative RKF1, Description = Probable LRR receptor-like serine/threonine-protein kinase RFK1, PFAM = PF11721;PF13855;PF07714)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'niben101scf06123_372667-376773' '(at1g16670 : 356.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G09010.1); Has 119178 Blast hits to 117668 proteins in 4361 species: Archae - 113; Bacteria - 13232; Metazoa - 43958; Fungi - 10262; Plants - 33662; Viruses - 406; Other Eukaryotes - 17545 (source: NCBI BLink). & (gnl|cdd|36401 : 337.0) no description available & (q8lpb4|pskr_dauca : 204.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 170.0) no description available & (reliability: 712.0) & (original description: Putative At1g16670, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'niben101scf06928_157730-161695' '(at1g16670 : 358.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G09010.1); Has 119178 Blast hits to 117668 proteins in 4361 species: Archae - 113; Bacteria - 13232; Metazoa - 43958; Fungi - 10262; Plants - 33662; Viruses - 406; Other Eukaryotes - 17545 (source: NCBI BLink). & (gnl|cdd|36401 : 333.0) no description available & (q8lpb4|pskr_dauca : 209.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 171.0) no description available & (reliability: 716.0) & (original description: Putative At1g16670, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'niben101scf08564_63903-79118' '(at1g56130 : 1241.0) Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G56140.1); Has 183160 Blast hits to 131873 proteins in 4617 species: Archae - 129; Bacteria - 16542; Metazoa - 50297; Fungi - 10850; Plants - 82984; Viruses - 436; Other Eukaryotes - 21922 (source: NCBI BLink). & (gnl|cdd|36401 : 370.0) no description available & (q8lkz1|nork_pea : 209.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|88314 : 175.0) no description available & (reliability: 2482.0) & (original description: Putative At1g56130, Description = Probable LRR receptor-like serine/threonine-protein kinase At1g56130, PFAM = PF13855;PF00069;PF11721)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'niben101scf15425_73092-84255' '(at3g09010 : 409.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G16670.1); Has 118495 Blast hits to 117144 proteins in 4669 species: Archae - 109; Bacteria - 13491; Metazoa - 44039; Fungi - 9996; Plants - 33355; Viruses - 385; Other Eukaryotes - 17120 (source: NCBI BLink). & (gnl|cdd|36401 : 354.0) no description available & (q8lpb4|pskr_dauca : 214.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 168.0) no description available & (reliability: 818.0) & (original description: Putative Os04g0679200, Description = OSJNBb0017I01.6 protein, PFAM = PF00069)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'niben101scf17372_144157-148860' '(at1g16670 : 513.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G09010.1); Has 119178 Blast hits to 117668 proteins in 4361 species: Archae - 113; Bacteria - 13232; Metazoa - 43958; Fungi - 10262; Plants - 33662; Viruses - 406; Other Eukaryotes - 17545 (source: NCBI BLink). & (gnl|cdd|36401 : 346.0) no description available & (q8l4h4|nork_medtr : 218.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 177.0) no description available & (reliability: 1026.0) & (original description: Putative BnaA06g11200D, Description = BnaA06g11200D protein, PFAM = PF00069)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'niben101scf19479_18175-22378' '(at1g16670 : 338.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G09010.1); Has 119178 Blast hits to 117668 proteins in 4361 species: Archae - 113; Bacteria - 13232; Metazoa - 43958; Fungi - 10262; Plants - 33662; Viruses - 406; Other Eukaryotes - 17545 (source: NCBI BLink). & (gnl|cdd|36401 : 332.0) no description available & (q8l4h4|nork_medtr : 211.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 170.0) no description available & (reliability: 676.0) & (original description: Putative At1g16670, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'niben101scf21007_55203-74631' '(at1g29750 : 1014.0) Receptor-like serine/threonine kinase (RKF1). The putative extracellular domain of the RKF1 protein contains 13 tandem repeats of leucine-rich sequences. Expressed in early flower primordial, stamen, and pollen grains.; receptor-like kinase in flowers 1 (RKF1); FUNCTIONS IN: protein serine/threonine kinase activity, receptor signaling protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT3G14840.2); Has 173330 Blast hits to 127712 proteins in 4547 species: Archae - 123; Bacteria - 16375; Metazoa - 48014; Fungi - 10256; Plants - 77963; Viruses - 389; Other Eukaryotes - 20210 (source: NCBI BLink). & (gnl|cdd|36401 : 362.0) no description available & (q8l4h4|nork_medtr : 208.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 180.0) no description available & (reliability: 2028.0) & (original description: Putative RKF1, Description = Probable LRR receptor-like serine/threonine-protein kinase RFK1, PFAM = PF07714;PF11721)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'niben101scf30867_27928-30461' '(at1g07650 : 121.0) Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G53430.1). & (reliability: 242.0) & (original description: Putative At1g53430, Description = LRR receptor-like kinase, PFAM = PF11721)' T '30.2.8.2' 'signalling.receptor kinases.leucine rich repeat VIII.VIII-2' 'niben101scf30867_30462-35520' '(at3g14840 : 207.0) Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G53420.1); Has 185540 Blast hits to 134573 proteins in 4786 species: Archae - 122; Bacteria - 17971; Metazoa - 51218; Fungi - 10628; Plants - 83318; Viruses - 446; Other Eukaryotes - 21837 (source: NCBI BLink). & (p93194|rpk1_iponi : 92.4) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 414.0) & (original description: Putative MBP_81C12.36, Description = Leucine-rich repeat-containing protein / serine/threonine protein kinase-related, PFAM = )' T '30.2.9' 'signalling.receptor kinases.leucine rich repeat IX' 'nbv0.5scaffold2037_199937-206896' '(at2g01820 : 814.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: pollen development; LOCATED IN: plasma membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: transmembrane kinase 1 (TAIR:AT1G66150.1); Has 179395 Blast hits to 141441 proteins in 4928 species: Archae - 173; Bacteria - 19044; Metazoa - 57542; Fungi - 11766; Plants - 68071; Viruses - 436; Other Eukaryotes - 22363 (source: NCBI BLink). & (gnl|cdd|36401 : 348.0) no description available & (o24585|cri4_maize : 208.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 179.0) no description available & (reliability: 1628.0) & (original description: Putative TMK4, Description = Receptor-like kinase TMK4, PFAM = PF07714;PF08263;PF08263)' T '30.2.9' 'signalling.receptor kinases.leucine rich repeat IX' 'niben044scf00015675ctg002_10693-15979' '(at1g66150 : 848.0) receptor-like transmembrane kinase I (TMK1); transmembrane kinase 1 (TMK1); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity; INVOLVED IN: signal transduction; LOCATED IN: extracellular region, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G01820.1); Has 173049 Blast hits to 137802 proteins in 4904 species: Archae - 168; Bacteria - 18898; Metazoa - 54853; Fungi - 11361; Plants - 66018; Viruses - 436; Other Eukaryotes - 21315 (source: NCBI BLink). & (gnl|cdd|36401 : 346.0) no description available & (o24585|cri4_maize : 214.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 182.0) no description available & (reliability: 1696.0) & (original description: Putative TMK4, Description = Receptor-like kinase TMK4, PFAM = PF08263;PF08263;PF07714;PF13855)' T '30.2.9' 'signalling.receptor kinases.leucine rich repeat IX' 'niben044scf00022436ctg011_443-5758' '(at2g01820 : 809.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: pollen development; LOCATED IN: plasma membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: transmembrane kinase 1 (TAIR:AT1G66150.1); Has 179395 Blast hits to 141441 proteins in 4928 species: Archae - 173; Bacteria - 19044; Metazoa - 57542; Fungi - 11766; Plants - 68071; Viruses - 436; Other Eukaryotes - 22363 (source: NCBI BLink). & (gnl|cdd|36401 : 345.0) no description available & (o24585|cri4_maize : 214.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 181.0) no description available & (reliability: 1618.0) & (original description: Putative BLK1, Description = Putative receptor protein kinase TMK1, PFAM = PF13855;PF08263;PF08263;PF07714)' T '30.2.9' 'signalling.receptor kinases.leucine rich repeat IX' 'niben044scf00049710ctg002_2001-7628' '(at2g01820 : 711.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: pollen development; LOCATED IN: plasma membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: transmembrane kinase 1 (TAIR:AT1G66150.1); Has 179395 Blast hits to 141441 proteins in 4928 species: Archae - 173; Bacteria - 19044; Metazoa - 57542; Fungi - 11766; Plants - 68071; Viruses - 436; Other Eukaryotes - 22363 (source: NCBI BLink). & (gnl|cdd|36401 : 338.0) no description available & (o24585|cri4_maize : 199.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 179.0) no description available & (reliability: 1422.0) & (original description: Putative CT268, Description = Putative receptor-like protein kinase, PFAM = PF08263;PF08263;PF07714)' T '30.2.9' 'signalling.receptor kinases.leucine rich repeat IX' 'niben101scf01209_100731-106369' '(at1g66150 : 1271.0) receptor-like transmembrane kinase I (TMK1); transmembrane kinase 1 (TMK1); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity; INVOLVED IN: signal transduction; LOCATED IN: extracellular region, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G01820.1); Has 173049 Blast hits to 137802 proteins in 4904 species: Archae - 168; Bacteria - 18898; Metazoa - 54853; Fungi - 11361; Plants - 66018; Viruses - 436; Other Eukaryotes - 21315 (source: NCBI BLink). & (gnl|cdd|36401 : 341.0) no description available & (q8l4h4|nork_medtr : 206.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 180.0) no description available & (reliability: 2542.0) & (original description: Putative TMK1, Description = Receptor protein kinase TMK1, PFAM = PF13855;PF08263;PF08263;PF00069)' T '30.2.9' 'signalling.receptor kinases.leucine rich repeat IX' 'niben101scf01975_403169-408595' '(at1g66150 : 856.0) receptor-like transmembrane kinase I (TMK1); transmembrane kinase 1 (TMK1); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity; INVOLVED IN: signal transduction; LOCATED IN: extracellular region, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G01820.1); Has 173049 Blast hits to 137802 proteins in 4904 species: Archae - 168; Bacteria - 18898; Metazoa - 54853; Fungi - 11361; Plants - 66018; Viruses - 436; Other Eukaryotes - 21315 (source: NCBI BLink). & (gnl|cdd|36401 : 347.0) no description available & (o24585|cri4_maize : 207.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 180.0) no description available & (reliability: 1712.0) & (original description: Putative TMK4, Description = Receptor-like kinase TMK4, PFAM = PF07714;PF08263;PF08263)' T '30.2.9' 'signalling.receptor kinases.leucine rich repeat IX' 'niben101scf03504_545515-552045' '(at2g01820 : 700.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: pollen development; LOCATED IN: plasma membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: transmembrane kinase 1 (TAIR:AT1G66150.1); Has 179395 Blast hits to 141441 proteins in 4928 species: Archae - 173; Bacteria - 19044; Metazoa - 57542; Fungi - 11766; Plants - 68071; Viruses - 436; Other Eukaryotes - 22363 (source: NCBI BLink). & (gnl|cdd|36401 : 331.0) no description available & (q8lpb4|pskr_dauca : 199.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 179.0) no description available & (reliability: 1400.0) & (original description: Putative CT268, Description = Putative receptor-like protein kinase, PFAM = PF08263;PF08263;PF00069)' T '30.2.9' 'signalling.receptor kinases.leucine rich repeat IX' 'niben101scf04861_169679-175255' '(at2g01820 : 1030.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: pollen development; LOCATED IN: plasma membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: transmembrane kinase 1 (TAIR:AT1G66150.1); Has 179395 Blast hits to 141441 proteins in 4928 species: Archae - 173; Bacteria - 19044; Metazoa - 57542; Fungi - 11766; Plants - 68071; Viruses - 436; Other Eukaryotes - 22363 (source: NCBI BLink). & (gnl|cdd|36401 : 337.0) no description available & (q8lpb4|pskr_dauca : 206.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47550 : 190.0) no description available & (reliability: 2060.0) & (original description: Putative MpRLK1, Description = Receptor-like kinase, PFAM = PF00069;PF08263;PF08263;PF12799)' T '30.2.9' 'signalling.receptor kinases.leucine rich repeat IX' 'niben101scf05071_17215-22761' '(at1g66150 : 1274.0) receptor-like transmembrane kinase I (TMK1); transmembrane kinase 1 (TMK1); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity; INVOLVED IN: signal transduction; LOCATED IN: extracellular region, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G01820.1); Has 173049 Blast hits to 137802 proteins in 4904 species: Archae - 168; Bacteria - 18898; Metazoa - 54853; Fungi - 11361; Plants - 66018; Viruses - 436; Other Eukaryotes - 21315 (source: NCBI BLink). & (gnl|cdd|36401 : 345.0) no description available & (o24585|cri4_maize : 207.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 180.0) no description available & (reliability: 2548.0) & (original description: Putative BLK1, Description = Putative receptor protein kinase TMK1, PFAM = PF08263;PF08263;PF00069)' T '30.2.9' 'signalling.receptor kinases.leucine rich repeat IX' 'niben101scf06441_10886-16435' '(at1g66150 : 1238.0) receptor-like transmembrane kinase I (TMK1); transmembrane kinase 1 (TMK1); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity; INVOLVED IN: signal transduction; LOCATED IN: extracellular region, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G01820.1); Has 173049 Blast hits to 137802 proteins in 4904 species: Archae - 168; Bacteria - 18898; Metazoa - 54853; Fungi - 11361; Plants - 66018; Viruses - 436; Other Eukaryotes - 21315 (source: NCBI BLink). & (gnl|cdd|36401 : 340.0) no description available & (q8lpb4|pskr_dauca : 205.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 178.0) no description available & (reliability: 2476.0) & (original description: Putative TMK1, Description = Receptor protein kinase TMK1, PFAM = PF08263;PF08263;PF00069)' T '30.2.9' 'signalling.receptor kinases.leucine rich repeat IX' 'niben101scf08447_85795-90902' '(at3g23750 : 549.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: transmembrane kinase 1 (TAIR:AT1G66150.1); Has 176104 Blast hits to 138784 proteins in 5021 species: Archae - 174; Bacteria - 16889; Metazoa - 56819; Fungi - 11325; Plants - 68733; Viruses - 454; Other Eukaryotes - 21710 (source: NCBI BLink). & (gnl|cdd|36401 : 345.0) no description available & (o24585|cri4_maize : 202.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 179.0) no description available & (reliability: 1098.0) & (original description: Putative TMK4, Description = Receptor-like kinase TMK4, PFAM = PF08263;PF08263;PF07714)' T '30.2.9' 'signalling.receptor kinases.leucine rich repeat IX' 'niben101scf10608_5197-10415' '(at3g23750 : 631.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: transmembrane kinase 1 (TAIR:AT1G66150.1); Has 176104 Blast hits to 138784 proteins in 5021 species: Archae - 174; Bacteria - 16889; Metazoa - 56819; Fungi - 11325; Plants - 68733; Viruses - 454; Other Eukaryotes - 21710 (source: NCBI BLink). & (gnl|cdd|36401 : 343.0) no description available & (o24585|cri4_maize : 214.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 183.0) no description available & (reliability: 1262.0) & (original description: Putative BnaC01g43590D, Description = BnaC01g43590D protein, PFAM = PF07714;PF13855;PF08263;PF08263)' T '30.2.9' 'signalling.receptor kinases.leucine rich repeat IX' 'niben101scf10889_219402-225129' '(at2g01820 : 1027.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: pollen development; LOCATED IN: plasma membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: transmembrane kinase 1 (TAIR:AT1G66150.1); Has 179395 Blast hits to 141441 proteins in 4928 species: Archae - 173; Bacteria - 19044; Metazoa - 57542; Fungi - 11766; Plants - 68071; Viruses - 436; Other Eukaryotes - 22363 (source: NCBI BLink). & (gnl|cdd|36401 : 338.0) no description available & (q8lpb4|pskr_dauca : 203.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47550 : 189.0) no description available & (reliability: 2054.0) & (original description: Putative TMK1, Description = Receptor protein kinase TMK1, PFAM = PF00069;PF08263;PF08263;PF12799)' T '30.2.9' 'signalling.receptor kinases.leucine rich repeat IX' 'niben101scf14096_49817-55160' '(at2g01820 : 751.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: pollen development; LOCATED IN: plasma membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: transmembrane kinase 1 (TAIR:AT1G66150.1); Has 179395 Blast hits to 141441 proteins in 4928 species: Archae - 173; Bacteria - 19044; Metazoa - 57542; Fungi - 11766; Plants - 68071; Viruses - 436; Other Eukaryotes - 22363 (source: NCBI BLink). & (gnl|cdd|36401 : 336.0) no description available & (q8lkz1|nork_pea : 185.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 177.0) no description available & (reliability: 1502.0) & (original description: Putative TMK3, Description = Receptor-like kinase TMK3, PFAM = PF07714;PF13855;PF08263;PF08263)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'nbv0.3scaffold352_126087-131728' '(gnl|cdd|36401 : 167.0) no description available & (at1g24030 : 117.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 120365 Blast hits to 119013 proteins in 4490 species: Archae - 114; Bacteria - 14164; Metazoa - 43937; Fungi - 10244; Plants - 33641; Viruses - 447; Other Eukaryotes - 17818 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 103.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 86.0) no description available & (reliability: 226.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF07714;PF00069)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'nbv0.3scaffold28518_5552-10830' '(at1g72300 : 1140.0) Encodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of PSY1. PSY1 is an 18-aa tyrosine-sulfated glycopeptide encoded by AT5G58650 that promotes cellular proliferation and expansion.; Leucine-rich receptor-like protein kinase family protein; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor like protein 2 (TAIR:AT1G17240.1); Has 184889 Blast hits to 127916 proteins in 4307 species: Archae - 126; Bacteria - 18793; Metazoa - 54455; Fungi - 9661; Plants - 78637; Viruses - 498; Other Eukaryotes - 22719 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 780.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 335.0) no description available & (gnl|cdd|87344 : 152.0) no description available & (reliability: 2280.0) & (original description: Putative PSYR1, Description = Tyrosine-sulfated glycopeptide receptor 1, PFAM = PF13855;PF13855;PF13855;PF00069;PF08263)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'nbv0.3scaffold53348_3849-7654' '(at3g28450 : 681.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G27190.1); Has 101664 Blast hits to 59951 proteins in 2302 species: Archae - 40; Bacteria - 6408; Metazoa - 16028; Fungi - 2446; Plants - 69126; Viruses - 161; Other Eukaryotes - 7455 (source: NCBI BLink). & (gnl|cdd|36401 : 257.0) no description available & (q8lpb4|pskr_dauca : 209.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 106.0) no description available & (reliability: 1362.0) & (original description: Putative BIR2, Description = Inactive LRR receptor-like serine/threonine-protein kinase BIR2, PFAM = PF13516;PF13516;PF08263;PF07714)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'nbv0.3scaffold87751_1-5798' '(q8lpb4|pskr_dauca : 1220.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (at2g02220 : 1155.0) Encodes a protein interacting with phytosulfokine, a five amino acid sulfated peptide (YIYTQ).; phytosulfokin receptor 1 (PSKR1); FUNCTIONS IN: peptide receptor activity, protein serine/threonine kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, response to wounding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phytosylfokine-alpha receptor 2 (TAIR:AT5G53890.1); Has 188205 Blast hits to 128830 proteins in 4018 species: Archae - 120; Bacteria - 18455; Metazoa - 56562; Fungi - 9680; Plants - 79633; Viruses - 405; Other Eukaryotes - 23350 (source: NCBI BLink). & (gnl|cdd|36401 : 338.0) no description available & (gnl|cdd|84488 : 165.0) no description available & (reliability: 2310.0) & (original description: Putative PSKR, Description = Phytosulfokine receptor 1, PFAM = PF00560;PF00069;PF13855;PF08263)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'nbv0.5scaffold254_835690-852146' '(q8lpb4|pskr_dauca : 1246.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (at2g02220 : 1194.0) Encodes a protein interacting with phytosulfokine, a five amino acid sulfated peptide (YIYTQ).; phytosulfokin receptor 1 (PSKR1); FUNCTIONS IN: peptide receptor activity, protein serine/threonine kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, response to wounding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phytosylfokine-alpha receptor 2 (TAIR:AT5G53890.1); Has 188205 Blast hits to 128830 proteins in 4018 species: Archae - 120; Bacteria - 18455; Metazoa - 56562; Fungi - 9680; Plants - 79633; Viruses - 405; Other Eukaryotes - 23350 (source: NCBI BLink). & (gnl|cdd|36401 : 337.0) no description available & (gnl|cdd|84488 : 162.0) no description available & (reliability: 2388.0) & (original description: Putative PSKR2, Description = Phytosulfokine receptor 2, PFAM = PF08263;PF13855;PF13855;PF00069;PF12799)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'nbv0.5scaffold3524_82925-86523' '(at5g20480 : 150.0) Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.; EF-TU receptor (EFR); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47090.1); Has 211073 Blast hits to 132033 proteins in 4602 species: Archae - 167; Bacteria - 19808; Metazoa - 69159; Fungi - 9873; Plants - 87247; Viruses - 333; Other Eukaryotes - 24486 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 132.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35665 : 91.6) no description available & (reliability: 288.0) & (original description: Putative PGSC0003DMG400007611, Description = Non-specific serine/threonine protein kinase, PFAM = PF08263;PF13855;PF13855)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'nbv0.5scaffold5712_8022-34780' '(at5g46330 : 160.0) Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB.; FLAGELLIN-SENSITIVE 2 (FLS2); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 147.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 107.0) no description available & (reliability: 294.0) & (original description: Putative PGSC0003DMG400001016, Description = Non-specific serine/threonine protein kinase, PFAM = PF00560;PF13855;PF13855)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'niben044scf00001525ctg036_3681-8658' '(at2g41820 : 1151.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT2G33170.1); Has 158259 Blast hits to 89796 proteins in 3550 species: Archae - 104; Bacteria - 14087; Metazoa - 43911; Fungi - 4831; Plants - 79030; Viruses - 167; Other Eukaryotes - 16129 (source: NCBI BLink). & (p93194|rpk1_iponi : 358.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 218.0) no description available & (gnl|cdd|84488 : 103.0) no description available & (reliability: 2302.0) & (original description: Putative PXC3, Description = Leucine-rich repeat receptor-like tyrosine-protein kinase, PFAM = PF07714;PF00560)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'niben044scf00005698ctg028_1888-7707' '(gnl|cdd|36401 : 167.0) no description available & (at1g24030 : 117.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 120365 Blast hits to 119013 proteins in 4490 species: Archae - 114; Bacteria - 14164; Metazoa - 43937; Fungi - 10244; Plants - 33641; Viruses - 447; Other Eukaryotes - 17818 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 105.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47550 : 87.6) no description available & (reliability: 230.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF07714;PF00069)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'niben044scf00028720ctg007_3282-8205' '(at1g55610 : 1425.0) mutant has Altered vascular cell differentiation; LRR Receptor Kinase; BRI1 like (BRL1); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: BRI1-like 3 (TAIR:AT3G13380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 442.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 337.0) no description available & (gnl|cdd|47549 : 165.0) no description available & (reliability: 2850.0) & (original description: Putative BRL1, Description = Serine/threonine-protein kinase BRI1-like 1, PFAM = PF00560;PF00069;PF13516;PF13516;PF13855;PF13855;PF08263)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'niben044scf00052609ctg002_1-3594' '(at5g48380 : 727.0) Encodes a BAK1-interacting receptor-like kinase named BIR1. Negatively regulates multiple plant resistance signaling pathways, one of which is the SOBIR1(AT2G31880)-dependent pathway.; BAK1-interacting receptor-like kinase 1 (BIR1); FUNCTIONS IN: protein kinase activity; INVOLVED IN: negative regulation of defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G28450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 323.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 301.0) no description available & (gnl|cdd|87344 : 126.0) no description available & (reliability: 1454.0) & (original description: Putative At5g48380, Description = Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380, PFAM = PF07714)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'niben101scf00128_218674-222479' '(at3g28450 : 682.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G27190.1); Has 101664 Blast hits to 59951 proteins in 2302 species: Archae - 40; Bacteria - 6408; Metazoa - 16028; Fungi - 2446; Plants - 69126; Viruses - 161; Other Eukaryotes - 7455 (source: NCBI BLink). & (gnl|cdd|36401 : 259.0) no description available & (q8lpb4|pskr_dauca : 210.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 109.0) no description available & (reliability: 1364.0) & (original description: Putative BIR2, Description = Inactive LRR receptor-like serine/threonine-protein kinase BIR2, PFAM = PF08263;PF07714;PF13516;PF13516)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'niben101scf00168_377573-379315' '(at3g56100 : 91.7) Protein kinase expressed in meristematic cells. Phosphorylates AGL24.; meristematic receptor-like kinase (MRLK); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: inflorescence meristem receptor-like kinase 2 (TAIR:AT3G51740.1); Has 154347 Blast hits to 110289 proteins in 3296 species: Archae - 124; Bacteria - 13554; Metazoa - 45622; Fungi - 8090; Plants - 69121; Viruses - 344; Other Eukaryotes - 17492 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative PGSC0003DMG400005590, Description = Receptor like protein 15, putative, PFAM = PF00560;PF00560)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'niben101scf00177_911277-919523' '(gnl|cdd|36401 : 267.0) no description available & (at5g40380 : 194.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (CRK42); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (TAIR:AT1G70530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29142 : 172.0) no description available & (o24585|cri4_maize : 158.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 350.0) & (original description: Putative Sb08g000610, Description = Putative uncharacterized protein Sb08g000610, PFAM = PF00069)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'niben101scf00985_758752-763579' '(at2g41820 : 1099.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT2G33170.1); Has 158259 Blast hits to 89796 proteins in 3550 species: Archae - 104; Bacteria - 14087; Metazoa - 43911; Fungi - 4831; Plants - 79030; Viruses - 167; Other Eukaryotes - 16129 (source: NCBI BLink). & (p93194|rpk1_iponi : 342.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 216.0) no description available & (gnl|cdd|84488 : 103.0) no description available & (reliability: 2198.0) & (original description: Putative PXC3, Description = Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3, PFAM = PF13855;PF00560;PF00560;PF07714)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'niben101scf01148_4162-8283' '(at5g48380 : 732.0) Encodes a BAK1-interacting receptor-like kinase named BIR1. Negatively regulates multiple plant resistance signaling pathways, one of which is the SOBIR1(AT2G31880)-dependent pathway.; BAK1-interacting receptor-like kinase 1 (BIR1); FUNCTIONS IN: protein kinase activity; INVOLVED IN: negative regulation of defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G28450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 318.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 303.0) no description available & (gnl|cdd|87344 : 128.0) no description available & (reliability: 1464.0) & (original description: Putative At5g48380, Description = Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380, PFAM = PF07714)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'niben101scf01203_43268-106447' '(at3g47570 : 543.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (p93194|rpk1_iponi : 381.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 245.0) no description available & (gnl|cdd|84488 : 156.0) no description available & (reliability: 996.0) & (original description: Putative glysoja_018717, Description = LRR receptor-like serine/threonine-protein kinase GSO1, PFAM = PF13855;PF13855;PF13855;PF00069;PF08263)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'niben101scf01225_430272-432883' '(at5g48380 : 139.0) Encodes a BAK1-interacting receptor-like kinase named BIR1. Negatively regulates multiple plant resistance signaling pathways, one of which is the SOBIR1(AT2G31880)-dependent pathway.; BAK1-interacting receptor-like kinase 1 (BIR1); FUNCTIONS IN: protein kinase activity; INVOLVED IN: negative regulation of defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G28450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 137.0) no description available & (q8lpb4|pskr_dauca : 100.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 278.0) & (original description: Putative DcRLK1, Description = Probably inactive leucine-rich repeat receptor-like protein kinase, PFAM = PF07714)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'niben101scf01453_794297-797427' '(at5g42440 : 369.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: phytosulfokin receptor 1 (TAIR:AT2G02220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 315.0) no description available & (q8lpb4|pskr_dauca : 246.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 168.0) no description available & (reliability: 738.0) & (original description: Putative At5g42440, Description = At5g42440, PFAM = PF07714)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'niben101scf01593_615666-620788' '(at5g53890 : 1144.0) Encodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of phytosulfokine (PSK), which is a 5-aa tyrosine-sulfated peptide that primarily promotes cellular proliferation.; phytosylfokine-alpha receptor 2 (PSKR2); FUNCTIONS IN: peptide receptor activity, protein serine/threonine kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, response to wounding; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phytosulfokin receptor 1 (TAIR:AT2G02220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 837.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 333.0) no description available & (gnl|cdd|47549 : 168.0) no description available & (reliability: 2288.0) & (original description: Putative PSKR2, Description = Phytosulfokine receptor 2, PFAM = PF13855;PF00069;PF08263;PF00560;PF00560;PF00560)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'niben101scf02174_15095-17589' '(at4g08850 : 136.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein with leucine-rich repeat domain (TAIR:AT1G35710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 120.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 256.0) & (original description: Putative PGSC0003DMG400004164, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'niben101scf03036_769615-775388' '(at5g07280 : 791.0) Encodes EMS1 (EXCESS MICROSPOROCYTES1), a putative leucine-rich repeat receptor protein kinase that controls somatic and reproductive cell fates in Arabidopsis anther.; EXCESS MICROSPOROCYTES1 (EMS1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 396.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 328.0) no description available & (gnl|cdd|47549 : 162.0) no description available & (reliability: 1582.0) & (original description: Putative MSP1, Description = Leucine-rich repeat receptor protein kinase MSP1, PFAM = PF00560;PF00560;PF00069;PF08263;PF13855;PF13855)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'niben101scf03534_51831-55923' '(gnl|cdd|36401 : 273.0) no description available & (at4g02010 : 199.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G20300.1); Has 117558 Blast hits to 116281 proteins in 4412 species: Archae - 107; Bacteria - 13740; Metazoa - 43399; Fungi - 9953; Plants - 33036; Viruses - 373; Other Eukaryotes - 16950 (source: NCBI BLink). & (q8l4h4|nork_medtr : 191.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47550 : 155.0) no description available & (reliability: 364.0) & (original description: Putative pto, Description = Putative receptor-like protein kinase, PFAM = PF00069)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'niben101scf04096_696001-701681' '(at5g07280 : 1207.0) Encodes EMS1 (EXCESS MICROSPOROCYTES1), a putative leucine-rich repeat receptor protein kinase that controls somatic and reproductive cell fates in Arabidopsis anther.; EXCESS MICROSPOROCYTES1 (EMS1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 468.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 340.0) no description available & (gnl|cdd|47549 : 180.0) no description available & (reliability: 2414.0) & (original description: Putative EMS1, Description = Leucine-rich repeat receptor protein kinase EMS1, PFAM = PF13855;PF13855;PF07714;PF08263)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'niben101scf04554_144066-146734' '(at5g48380 : 207.0) Encodes a BAK1-interacting receptor-like kinase named BIR1. Negatively regulates multiple plant resistance signaling pathways, one of which is the SOBIR1(AT2G31880)-dependent pathway.; BAK1-interacting receptor-like kinase 1 (BIR1); FUNCTIONS IN: protein kinase activity; INVOLVED IN: negative regulation of defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G28450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative BnaC03g35320D, Description = BnaC03g35320D protein, PFAM = PF08263)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'niben101scf06775_141291-145724' '(at2g41820 : 1155.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT2G33170.1); Has 158259 Blast hits to 89796 proteins in 3550 species: Archae - 104; Bacteria - 14087; Metazoa - 43911; Fungi - 4831; Plants - 79030; Viruses - 167; Other Eukaryotes - 16129 (source: NCBI BLink). & (p93194|rpk1_iponi : 369.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 224.0) no description available & (gnl|cdd|29142 : 106.0) no description available & (reliability: 2310.0) & (original description: Putative PXC3, Description = Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3, PFAM = PF07714;PF13855;PF00560)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'niben101scf06807_277600-281453' '(at1g27190 : 622.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G69990.1); Has 109141 Blast hits to 65135 proteins in 2350 species: Archae - 52; Bacteria - 7607; Metazoa - 18517; Fungi - 2536; Plants - 71890; Viruses - 144; Other Eukaryotes - 8395 (source: NCBI BLink). & (gnl|cdd|36401 : 271.0) no description available & (q8lpb4|pskr_dauca : 205.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 126.0) no description available & (reliability: 1244.0) & (original description: Putative At1g27190, Description = Probable inactive receptor kinase At1g27190, PFAM = PF07714;PF08263)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'niben101scf09811_29480-34446' '(at5g53890 : 1157.0) Encodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of phytosulfokine (PSK), which is a 5-aa tyrosine-sulfated peptide that primarily promotes cellular proliferation.; phytosylfokine-alpha receptor 2 (PSKR2); FUNCTIONS IN: peptide receptor activity, protein serine/threonine kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, response to wounding; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phytosulfokin receptor 1 (TAIR:AT2G02220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 833.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 332.0) no description available & (gnl|cdd|47549 : 166.0) no description available & (reliability: 2314.0) & (original description: Putative PSKR2, Description = Phytosulfokine receptor 2, PFAM = PF13855;PF13855;PF00069;PF00560;PF00560;PF00560;PF08263)' T '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'niben101scf20124_57780-63201' '(at1g34420 : 709.0) leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G41820.1); Has 146592 Blast hits to 61165 proteins in 1949 species: Archae - 41; Bacteria - 12464; Metazoa - 44749; Fungi - 1974; Plants - 76166; Viruses - 76; Other Eukaryotes - 11122 (source: NCBI BLink). & (p93194|rpk1_iponi : 265.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 198.0) no description available & (gnl|cdd|29142 : 91.8) no description available & (reliability: 1418.0) & (original description: Putative RLP65, Description = Leucine Rich Repeat family protein, expressed, PFAM = PF00560;PF00560;PF08263;PF13855;PF07714)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'nbv0.3scaffold952_24889-31229' '(at5g65710 : 981.0) HAESA-like 2 (HSL2); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: HAESA-like 1 (TAIR:AT1G28440.1); Has 209953 Blast hits to 136246 proteins in 4591 species: Archae - 161; Bacteria - 21175; Metazoa - 62961; Fungi - 10773; Plants - 89081; Viruses - 373; Other Eukaryotes - 25429 (source: NCBI BLink). & (p93194|rpk1_iponi : 450.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 286.0) no description available & (gnl|cdd|47550 : 163.0) no description available & (reliability: 1962.0) & (original description: Putative HSL2, Description = LRR receptor-like serine/threonine-protein kinase HSL2, PFAM = PF00069;PF13855;PF13855;PF08263)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'nbv0.3scaffold25254_608-5714' '(at5g25930 : 944.0) Protein kinase family protein with leucine-rich repeat domain; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor like protein 52 (TAIR:AT5G25910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 386.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 265.0) no description available & (gnl|cdd|29142 : 139.0) no description available & (reliability: 1888.0) & (original description: Putative BnaA06g27970D, Description = BnaA06g27970D protein, PFAM = PF00069;PF08263;PF13855;PF13855;PF00560;PF00560)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'nbv0.3scaffold46713_1-2367' '(at1g35710 : 137.0) Protein kinase family protein with leucine-rich repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT4G08850.1); Has 304074 Blast hits to 147448 proteins in 4766 species: Archae - 178; Bacteria - 29187; Metazoa - 106993; Fungi - 12531; Plants - 120860; Viruses - 430; Other Eukaryotes - 33895 (source: NCBI BLink). & (p93194|rpk1_iponi : 128.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 91.6) no description available & (reliability: 270.0) & (original description: Putative PGSC0003DMG400004164, Description = Non-specific serine/threonine protein kinase, PFAM = PF00560;PF13855;PF13855)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'nbv0.3scaffold62080_1-5587' '(at3g47090 : 545.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 208488 Blast hits to 131556 proteins in 4837 species: Archae - 167; Bacteria - 21304; Metazoa - 66210; Fungi - 9769; Plants - 86245; Viruses - 308; Other Eukaryotes - 24485 (source: NCBI BLink). & (p93194|rpk1_iponi : 419.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 231.0) no description available & (gnl|cdd|29142 : 146.0) no description available & (reliability: 988.0) & (original description: Putative PGSC0003DMG400028438, Description = Non-specific serine/threonine protein kinase, PFAM = PF08263;PF13855;PF13855;PF13855;PF13855;PF00560;PF00560;PF00069)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'nbv0.3scaffold147893_1-1110' '(at5g48940 : 202.0) Leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; EXPRESSED IN: root, cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT3G24240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p93194|rpk1_iponi : 85.1) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 404.0) & (original description: Putative upk, Description = LRR receptor-like serine/threonine-protein kinase RCH1, PFAM = PF08263;PF13855)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'nbv0.5scaffold562_367827-370291' '(at5g65700 : 215.0) Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM2,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM1 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs.; BARELY ANY MERISTEM 1 (BAM1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT3G49670.1). & (gnl|cdd|36401 : 122.0) no description available & (p93194|rpk1_iponi : 92.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 430.0) & (original description: Putative har1, Description = Non-specific serine/threonine protein kinase, PFAM = PF00069)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'nbv0.5scaffold893_204205-209899' '(at5g49660 : 1071.0) Leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT1G09970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 398.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 290.0) no description available & (gnl|cdd|84488 : 161.0) no description available & (reliability: 2142.0) & (original description: Putative Sb08g022790, Description = Putative uncharacterized protein Sb08g022790, PFAM = PF13855;PF00560;PF00069)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'nbv0.5scaffold3524_82925-86523' '(at5g20480 : 150.0) Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.; EF-TU receptor (EFR); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47090.1); Has 211073 Blast hits to 132033 proteins in 4602 species: Archae - 167; Bacteria - 19808; Metazoa - 69159; Fungi - 9873; Plants - 87247; Viruses - 333; Other Eukaryotes - 24486 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 132.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35665 : 91.6) no description available & (reliability: 300.0) & (original description: Putative PGSC0003DMG400007611, Description = Non-specific serine/threonine protein kinase, PFAM = PF08263;PF13855;PF13855)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'nbv0.5scaffold3609_150098-156095' '(at5g61480 : 1198.0) PHLOEM INTERCALATED WITH XYLEM (PXY); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT4G28650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 465.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 295.0) no description available & (gnl|cdd|47550 : 161.0) no description available & (reliability: 2396.0) & (original description: Putative TDR, Description = Leucine-rich repeat receptor-like protein kinase TDR, PFAM = PF13855;PF00560;PF08263;PF00069)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'nbv0.5scaffold5712_3404-11141' '(at3g47570 : 544.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (p93194|rpk1_iponi : 425.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 235.0) no description available & (gnl|cdd|29142 : 147.0) no description available & (reliability: 1026.0) & (original description: Putative PGSC0003DMG400010351, Description = Non-specific serine/threonine protein kinase, PFAM = PF08263;PF00069;PF13855;PF13855;PF13855;PF00560)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'nbv0.5scaffold5712_8022-34780' '(at5g46330 : 160.0) Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB.; FLAGELLIN-SENSITIVE 2 (FLS2); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 147.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 107.0) no description available & (reliability: 312.0) & (original description: Putative PGSC0003DMG400001016, Description = Non-specific serine/threonine protein kinase, PFAM = PF00560;PF13855;PF13855)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'nbv0.5scaffold8557_29739-34909' '(at5g65700 : 1257.0) Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM2,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM1 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs.; BARELY ANY MERISTEM 1 (BAM1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT3G49670.1). & (p93194|rpk1_iponi : 388.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 314.0) no description available & (gnl|cdd|87344 : 166.0) no description available & (reliability: 2514.0) & (original description: Putative har1, Description = Non-specific serine/threonine protein kinase, PFAM = PF13516;PF00560;PF00069)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben044scf00004101ctg015_1-5296' '(p93194|rpk1_iponi : 619.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (at1g73080 : 597.0) Encodes a leucine-rich repeat receptor kinase. Functions as a receptor for AtPep1 to amplify innate immunity response to pathogen attacks.; PEP1 receptor 1 (PEPR1); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: response to jasmonic acid stimulus, protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, response to wounding, innate immune response; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: PEP1 receptor 2 (TAIR:AT1G17750.1); Has 241126 Blast hits to 137730 proteins in 4689 species: Archae - 172; Bacteria - 22281; Metazoa - 70921; Fungi - 11252; Plants - 107317; Viruses - 391; Other Eukaryotes - 28792 (source: NCBI BLink). & (gnl|cdd|36401 : 256.0) no description available & (gnl|cdd|29142 : 154.0) no description available & (reliability: 1194.0) & (original description: Putative Sb07g027920, Description = Putative uncharacterized protein Sb07g027920, PFAM = PF00069;PF08263)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben044scf00004388ctg037_425-3909' '(at3g24240 : 134.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT5G48940.1); Has 246558 Blast hits to 135557 proteins in 3810 species: Archae - 176; Bacteria - 24262; Metazoa - 71588; Fungi - 10499; Plants - 111580; Viruses - 361; Other Eukaryotes - 28092 (source: NCBI BLink). & (p93194|rpk1_iponi : 129.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 94.3) no description available & (reliability: 268.0) & (original description: Putative PGSC0003DMG400001016, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF13516)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben044scf00006500ctg009_43361-48650' '(at1g09970 : 1108.0) RLK7 belongs to a leucine-rich repeat class of receptor-likekinase (LRR-RLKs). It is involved in the control of germination speed and the tolerance to oxidant stress.; LRR XI-23; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid autophosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G19700.1); Has 205125 Blast hits to 136515 proteins in 4580 species: Archae - 168; Bacteria - 22290; Metazoa - 61642; Fungi - 10712; Plants - 85268; Viruses - 403; Other Eukaryotes - 24642 (source: NCBI BLink). & (gnl|cdd|36401 : 291.0) no description available & (p93194|rpk1_iponi : 271.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|29142 : 158.0) no description available & (reliability: 2216.0) & (original description: Putative IKU2, Description = Receptor-like protein kinase HAIKU2, PFAM = PF00069;PF08263)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben044scf00007066ctg007_7154-13126' '(at5g65700 : 1493.0) Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM2,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM1 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs.; BARELY ANY MERISTEM 1 (BAM1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT3G49670.1). & (p93194|rpk1_iponi : 493.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 315.0) no description available & (gnl|cdd|87344 : 166.0) no description available & (reliability: 2986.0) & (original description: Putative BAM1, Description = Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1, PFAM = PF08263;PF13855;PF13516;PF00069;PF12799)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben044scf00009177ctg001_1-5181' '(at1g28440 : 1276.0) HAESA-like 1 (HSL1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT4G28490.1); Has 214855 Blast hits to 132793 proteins in 4138 species: Archae - 139; Bacteria - 23060; Metazoa - 65756; Fungi - 10225; Plants - 90032; Viruses - 401; Other Eukaryotes - 25242 (source: NCBI BLink). & (p93194|rpk1_iponi : 440.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 291.0) no description available & (gnl|cdd|29142 : 156.0) no description available & (reliability: 2552.0) & (original description: Putative grlk5, Description = Non-specific serine/threonine protein kinase, PFAM = PF00069;PF13855;PF08263)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben044scf00015116ctg018_6188-12027' '(at5g63930 : 1205.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT2G33170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 363.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 316.0) no description available & (gnl|cdd|84488 : 166.0) no description available & (reliability: 2410.0) & (original description: Putative At5g63930, Description = Probable leucine-rich repeat receptor-like protein kinase At5g63930, PFAM = PF00560;PF00560;PF00069;PF08263)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben044scf00028720ctg007_3282-8205' '(at1g55610 : 1425.0) mutant has Altered vascular cell differentiation; LRR Receptor Kinase; BRI1 like (BRL1); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: BRI1-like 3 (TAIR:AT3G13380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 442.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 337.0) no description available & (gnl|cdd|47549 : 165.0) no description available & (reliability: 2850.0) & (original description: Putative BRL1, Description = Serine/threonine-protein kinase BRI1-like 1, PFAM = PF00560;PF00069;PF13516;PF13516;PF13855;PF13855;PF08263)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben044scf00031792ctg000_1-2723' '(at2g25470 : 207.0) receptor like protein 21 (RLP21); INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: hypocotyl; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 14 (TAIR:AT1G74180.1); Has 123339 Blast hits to 32686 proteins in 1192 species: Archae - 50; Bacteria - 9219; Metazoa - 30627; Fungi - 1506; Plants - 72809; Viruses - 37; Other Eukaryotes - 9091 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 174.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35665 : 98.6) no description available & (reliability: 374.0) & (original description: Putative PGSC0003DMG400023396, Description = Leucine-rich repeat receptor protein kinase EXS, putative, PFAM = PF13855;PF13855;PF13855)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben044scf00032382ctg001_21486-28024' '(at4g20270 : 1002.0) Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function.; BARELY ANY MERISTEM 3 (BAM3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: regulation of meristem growth, protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, leaf development, floral organ development; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G65700.2); Has 219938 Blast hits to 139586 proteins in 4977 species: Archae - 151; Bacteria - 21929; Metazoa - 70277; Fungi - 10656; Plants - 90391; Viruses - 423; Other Eukaryotes - 26111 (source: NCBI BLink). & (p93194|rpk1_iponi : 445.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 298.0) no description available & (gnl|cdd|87344 : 159.0) no description available & (reliability: 1986.0) & (original description: Putative BAM3, Description = Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3, PFAM = PF00560;PF08263;PF00069;PF13855)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben044scf00037616ctg000_857-4932' '(at2g31880 : 692.0) Encodes a putative leucine rich repeat transmembrane protein that is expressed in response to Pseudomonas syringae. Expression of SRRLK may be required for silencing via lsiRNAs. Regulates cell death and innate immunity.; SUPPRESSOR OF BIR1 1 (SOBIR1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, positive regulation of defense response, negative regulation of floral organ abscission, positive regulation of cell death; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G63930.1); Has 176453 Blast hits to 132218 proteins in 4789 species: Archae - 165; Bacteria - 16198; Metazoa - 50399; Fungi - 11231; Plants - 77353; Viruses - 425; Other Eukaryotes - 20682 (source: NCBI BLink). & (gnl|cdd|36401 : 257.0) no description available & (p93194|rpk1_iponi : 209.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|29142 : 171.0) no description available & (reliability: 1384.0) & (original description: Putative SOBIR1, Description = Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1, PFAM = PF00069;PF12799;PF00560)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben044scf00037942ctg003_1311-7033' '(at5g65700 : 1278.0) Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM2,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM1 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs.; BARELY ANY MERISTEM 1 (BAM1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT3G49670.1). & (p93194|rpk1_iponi : 405.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 315.0) no description available & (gnl|cdd|87344 : 166.0) no description available & (reliability: 2556.0) & (original description: Putative har1, Description = Non-specific serine/threonine protein kinase, PFAM = PF13516;PF00560;PF00069)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben044scf00051752ctg002_1-5155' '(at4g20140 : 1345.0) Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis.; GASSHO1 (GSO1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, embryo development, epidermis development; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT5G44700.1); Has 301150 Blast hits to 144127 proteins in 5007 species: Archae - 193; Bacteria - 28594; Metazoa - 96322; Fungi - 11667; Plants - 129816; Viruses - 411; Other Eukaryotes - 34147 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 384.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 288.0) no description available & (gnl|cdd|84488 : 175.0) no description available & (reliability: 2690.0) & (original description: Putative GSO1, Description = LRR receptor-like serine/threonine-protein kinase GSO1, PFAM = PF08263;PF13855;PF13855;PF13855;PF00560;PF00560;PF00069)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben044scf00053594ctg002_1-2876' '(at3g47090 : 182.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 208488 Blast hits to 131556 proteins in 4837 species: Archae - 167; Bacteria - 21304; Metazoa - 66210; Fungi - 9769; Plants - 86245; Viruses - 308; Other Eukaryotes - 24485 (source: NCBI BLink). & (p93194|rpk1_iponi : 158.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 83.2) no description available & (reliability: 346.0) & (original description: Putative TCM_031965, Description = Serine-threonine protein kinase, PFAM = PF00560;PF08263;PF13855;PF13855)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf00168_377573-379315' '(at3g56100 : 91.7) Protein kinase expressed in meristematic cells. Phosphorylates AGL24.; meristematic receptor-like kinase (MRLK); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: inflorescence meristem receptor-like kinase 2 (TAIR:AT3G51740.1); Has 154347 Blast hits to 110289 proteins in 3296 species: Archae - 124; Bacteria - 13554; Metazoa - 45622; Fungi - 8090; Plants - 69121; Viruses - 344; Other Eukaryotes - 17492 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative PGSC0003DMG400005590, Description = Receptor like protein 15, putative, PFAM = PF00560;PF00560)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf00239_928917-935693' '(at3g47570 : 512.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (p93194|rpk1_iponi : 436.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 252.0) no description available & (gnl|cdd|87344 : 159.0) no description available & (reliability: 954.0) & (original description: Putative PGSC0003DMG400022000, Description = Non-specific serine/threonine protein kinase, PFAM = PF00069;PF08263;PF13855;PF13855;PF13855;PF13855)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf00541_508442-514060' '(at3g24240 : 907.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT5G48940.1); Has 246558 Blast hits to 135557 proteins in 3810 species: Archae - 176; Bacteria - 24262; Metazoa - 71588; Fungi - 10499; Plants - 111580; Viruses - 361; Other Eukaryotes - 28092 (source: NCBI BLink). & (p93194|rpk1_iponi : 440.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 275.0) no description available & (gnl|cdd|29142 : 145.0) no description available & (reliability: 1814.0) & (original description: Putative upk, Description = LRR receptor-like serine/threonine-protein kinase RCH1, PFAM = PF08263;PF00560;PF00560;PF00560;PF13855;PF13855;PF13855;PF00069)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf00541_508523-511086' '(at5g48940 : 85.5) Leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; EXPRESSED IN: root, cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT3G24240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative upk, Description = LRR receptor-like serine/threonine-protein kinase RCH1, PFAM = PF00560;PF08263;PF13855)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf00675_443841-449280' '(at5g56040 : 1312.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT4G26540.1); Has 231331 Blast hits to 125911 proteins in 4380 species: Archae - 141; Bacteria - 23597; Metazoa - 71861; Fungi - 8804; Plants - 101197; Viruses - 340; Other Eukaryotes - 25391 (source: NCBI BLink). & (p93194|rpk1_iponi : 483.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 269.0) no description available & (gnl|cdd|29142 : 134.0) no description available & (reliability: 2624.0) & (original description: Putative upk, Description = Receptor-like protein kinase 2, PFAM = PF00069;PF08263;PF13855;PF13855)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf00904_289323-296062' '(at5g65700 : 1420.0) Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM2,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM1 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs.; BARELY ANY MERISTEM 1 (BAM1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT3G49670.1). & (p93194|rpk1_iponi : 471.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 311.0) no description available & (gnl|cdd|87344 : 161.0) no description available & (reliability: 2840.0) & (original description: Putative BAM1, Description = Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1, PFAM = PF08263;PF07714;PF00560;PF00560;PF00560)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf01203_43268-106447' '(at3g47570 : 543.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (p93194|rpk1_iponi : 381.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 245.0) no description available & (gnl|cdd|84488 : 156.0) no description available & (reliability: 1028.0) & (original description: Putative glysoja_018717, Description = LRR receptor-like serine/threonine-protein kinase GSO1, PFAM = PF13855;PF13855;PF13855;PF00069;PF08263)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf01267_1122953-1129391' '(at5g49660 : 1050.0) Leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT1G09970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 287.0) no description available & (p93194|rpk1_iponi : 206.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|84488 : 161.0) no description available & (reliability: 2100.0) & (original description: Putative Sb08g022790, Description = Putative uncharacterized protein Sb08g022790, PFAM = PF00069;PF13855;PF00560)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf01711_109897-118220' '(at4g20270 : 1010.0) Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function.; BARELY ANY MERISTEM 3 (BAM3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: regulation of meristem growth, protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, leaf development, floral organ development; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G65700.2); Has 219938 Blast hits to 139586 proteins in 4977 species: Archae - 151; Bacteria - 21929; Metazoa - 70277; Fungi - 10656; Plants - 90391; Viruses - 423; Other Eukaryotes - 26111 (source: NCBI BLink). & (p93194|rpk1_iponi : 455.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 297.0) no description available & (gnl|cdd|87344 : 156.0) no description available & (reliability: 1990.0) & (original description: Putative BAM3, Description = Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3, PFAM = PF00560;PF08263;PF07714)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf02039_422-5585' '(at1g08590 : 1126.0) similar to CLV1-like leucine rich repeat transmembrane receptor-like protein kinase (Ipomoea nil) (U77888); Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, leaf; EXPRESSED DURING: LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT4G28650.1); Has 238620 Blast hits to 145276 proteins in 3605 species: Archae - 165; Bacteria - 22033; Metazoa - 74123; Fungi - 11983; Plants - 100762; Viruses - 458; Other Eukaryotes - 29096 (source: NCBI BLink). & (gnl|cdd|36401 : 284.0) no description available & (p93194|rpk1_iponi : 257.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|84488 : 163.0) no description available & (reliability: 2252.0) & (original description: Putative PXL1, Description = Leucine-rich repeat receptor-like protein kinase PXL1, PFAM = PF13516;PF08263;PF13855;PF13855;PF00069)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf02123_1089080-1092398' '(at3g20820 : 424.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction, defense response; LOCATED IN: apoplast, cell wall, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G12940.1); Has 70868 Blast hits to 23934 proteins in 998 species: Archae - 25; Bacteria - 4468; Metazoa - 12756; Fungi - 677; Plants - 48104; Viruses - 0; Other Eukaryotes - 4838 (source: NCBI BLink). & (p93194|rpk1_iponi : 148.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 94.3) no description available & (reliability: 784.0) & (original description: Putative lrr, Description = Leucine rich repeat protein, PFAM = PF13855;PF13855;PF08263)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf02174_15095-17589' '(at4g08850 : 136.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein with leucine-rich repeat domain (TAIR:AT1G35710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 120.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 270.0) & (original description: Putative PGSC0003DMG400004164, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf02216_144465-149906' '(at3g20820 : 447.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction, defense response; LOCATED IN: apoplast, cell wall, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G12940.1); Has 70868 Blast hits to 23934 proteins in 998 species: Archae - 25; Bacteria - 4468; Metazoa - 12756; Fungi - 677; Plants - 48104; Viruses - 0; Other Eukaryotes - 4838 (source: NCBI BLink). & (p58823|pgip3_phavu : 140.0) Polygalacturonase inhibitor 3 precursor (Polygalacturonase-inhibiting protein) (PGIP-2) (PGIP-3) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|35665 : 83.9) no description available & (reliability: 852.0) & (original description: Putative lrr, Description = Leucine rich repeat protein, PFAM = PF13855;PF13855;PF08263)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf02217_507423-512673' '(at5g25930 : 986.0) Protein kinase family protein with leucine-rich repeat domain; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor like protein 52 (TAIR:AT5G25910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 399.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 290.0) no description available & (gnl|cdd|29142 : 159.0) no description available & (reliability: 1972.0) & (original description: Putative HSL1, Description = Receptor-like protein kinase HSL1, PFAM = PF00069;PF00560;PF00560;PF08263;PF13855;PF13855)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf02417_111071-117211' '(at5g65710 : 978.0) HAESA-like 2 (HSL2); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: HAESA-like 1 (TAIR:AT1G28440.1); Has 209953 Blast hits to 136246 proteins in 4591 species: Archae - 161; Bacteria - 21175; Metazoa - 62961; Fungi - 10773; Plants - 89081; Viruses - 373; Other Eukaryotes - 25429 (source: NCBI BLink). & (p93194|rpk1_iponi : 451.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 285.0) no description available & (gnl|cdd|47550 : 163.0) no description available & (reliability: 1956.0) & (original description: Putative HSL2, Description = LRR receptor-like serine/threonine-protein kinase HSL2, PFAM = PF00069;PF13855;PF13855;PF08263)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf02509_1165350-1168453' '(at3g20820 : 437.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction, defense response; LOCATED IN: apoplast, cell wall, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G12940.1); Has 70868 Blast hits to 23934 proteins in 998 species: Archae - 25; Bacteria - 4468; Metazoa - 12756; Fungi - 677; Plants - 48104; Viruses - 0; Other Eukaryotes - 4838 (source: NCBI BLink). & (p93194|rpk1_iponi : 140.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 95.5) no description available & (reliability: 838.0) & (original description: Putative lrr, Description = DNA-damage-repair/toleration protein DRT100, PFAM = PF13855;PF13855;PF08263)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf02531_69217-76450' '(at4g20140 : 512.0) Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis.; GASSHO1 (GSO1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, embryo development, epidermis development; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT5G44700.1); Has 301150 Blast hits to 144127 proteins in 5007 species: Archae - 193; Bacteria - 28594; Metazoa - 96322; Fungi - 11667; Plants - 129816; Viruses - 411; Other Eukaryotes - 34147 (source: NCBI BLink). & (p93194|rpk1_iponi : 421.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 246.0) no description available & (gnl|cdd|84488 : 161.0) no description available & (reliability: 1024.0) & (original description: Putative PGSC0003DMG400028474, Description = Leucine-rich repeat protein kinase family protein, putative, PFAM = PF08263;PF00069;PF13855;PF13855;PF13855;PF13855)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf02531_112917-119750' '(at3g47570 : 514.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (p93194|rpk1_iponi : 330.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 251.0) no description available & (gnl|cdd|84488 : 161.0) no description available & (reliability: 930.0) & (original description: Putative glysoja_018717, Description = LRR receptor-like serine/threonine-protein kinase GSO1, PFAM = PF00069;PF08263;PF13855;PF13855;PF13855)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf02878_373736-379309' '(at3g24240 : 1321.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT5G48940.1); Has 246558 Blast hits to 135557 proteins in 3810 species: Archae - 176; Bacteria - 24262; Metazoa - 71588; Fungi - 10499; Plants - 111580; Viruses - 361; Other Eukaryotes - 28092 (source: NCBI BLink). & (p93194|rpk1_iponi : 513.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 291.0) no description available & (gnl|cdd|87344 : 158.0) no description available & (reliability: 2642.0) & (original description: Putative RCH2, Description = Receptor-like protein kinase 2, PFAM = PF00069;PF13855;PF13855)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf03169_264667-270197' '(at1g28440 : 1298.0) HAESA-like 1 (HSL1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT4G28490.1); Has 214855 Blast hits to 132793 proteins in 4138 species: Archae - 139; Bacteria - 23060; Metazoa - 65756; Fungi - 10225; Plants - 90032; Viruses - 401; Other Eukaryotes - 25242 (source: NCBI BLink). & (p93194|rpk1_iponi : 452.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 293.0) no description available & (gnl|cdd|29142 : 156.0) no description available & (reliability: 2596.0) & (original description: Putative HSL1, Description = Receptor-like protein kinase HSL1, PFAM = PF00560;PF00069;PF08263;PF13855)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf03251_125885-130956' '(at5g49660 : 922.0) Leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT1G09970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 280.0) no description available & (p93194|rpk1_iponi : 198.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|84488 : 165.0) no description available & (reliability: 1844.0) & (original description: Putative Sb08g022790, Description = Putative uncharacterized protein Sb08g022790, PFAM = PF08263;PF00069)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf03445_162496-167423' '(at4g20140 : 623.0) Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis.; GASSHO1 (GSO1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, embryo development, epidermis development; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT5G44700.1); Has 301150 Blast hits to 144127 proteins in 5007 species: Archae - 193; Bacteria - 28594; Metazoa - 96322; Fungi - 11667; Plants - 129816; Viruses - 411; Other Eukaryotes - 34147 (source: NCBI BLink). & (p93194|rpk1_iponi : 313.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 141.0) no description available & (reliability: 1246.0) & (original description: Putative Sb09g005150, Description = Putative uncharacterized protein Sb09g005150, PFAM = PF13855;PF13855;PF12799;PF08263;PF00560;PF00560;PF13516)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf03445_563007-568982' '(at4g26540 : 1003.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: inflorescence meristem; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G56040.2); Has 218237 Blast hits to 120439 proteins in 3896 species: Archae - 151; Bacteria - 20470; Metazoa - 64079; Fungi - 7848; Plants - 101542; Viruses - 308; Other Eukaryotes - 23839 (source: NCBI BLink). & (p93194|rpk1_iponi : 500.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 292.0) no description available & (gnl|cdd|84488 : 159.0) no description available & (reliability: 2006.0) & (original description: Putative upk, Description = Receptor-like protein kinase 2, PFAM = PF13855;PF13855;PF13855;PF08263;PF00069)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf03467_42481-48649' '(at2g33170 : 1195.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G63930.1); Has 252347 Blast hits to 139850 proteins in 4875 species: Archae - 176; Bacteria - 22560; Metazoa - 76410; Fungi - 11433; Plants - 110453; Viruses - 462; Other Eukaryotes - 30853 (source: NCBI BLink). & (p93194|rpk1_iponi : 530.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 311.0) no description available & (gnl|cdd|84488 : 167.0) no description available & (reliability: 2390.0) & (original description: Putative At5g63930, Description = Probable leucine-rich repeat receptor-like protein kinase At5g63930, PFAM = PF08263;PF13855;PF00560;PF00069)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf03685_8406-13533' '(at5g25930 : 949.0) Protein kinase family protein with leucine-rich repeat domain; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor like protein 52 (TAIR:AT5G25910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 310.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 285.0) no description available & (gnl|cdd|29142 : 170.0) no description available & (reliability: 1898.0) & (original description: Putative Os05g0522600, Description = Os05g0522600 protein, PFAM = PF00560;PF08263;PF00069)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf03816_141203-145104' '(at2g31880 : 683.0) Encodes a putative leucine rich repeat transmembrane protein that is expressed in response to Pseudomonas syringae. Expression of SRRLK may be required for silencing via lsiRNAs. Regulates cell death and innate immunity.; SUPPRESSOR OF BIR1 1 (SOBIR1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, positive regulation of defense response, negative regulation of floral organ abscission, positive regulation of cell death; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G63930.1); Has 176453 Blast hits to 132218 proteins in 4789 species: Archae - 165; Bacteria - 16198; Metazoa - 50399; Fungi - 11231; Plants - 77353; Viruses - 425; Other Eukaryotes - 20682 (source: NCBI BLink). & (gnl|cdd|36401 : 252.0) no description available & (p93194|rpk1_iponi : 203.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|47550 : 173.0) no description available & (reliability: 1366.0) & (original description: Putative SOBIR1, Description = Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1, PFAM = PF12799;PF13855;PF00069)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf04053_367903-373985' '(at1g09970 : 962.0) RLK7 belongs to a leucine-rich repeat class of receptor-likekinase (LRR-RLKs). It is involved in the control of germination speed and the tolerance to oxidant stress.; LRR XI-23; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid autophosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G19700.1); Has 205125 Blast hits to 136515 proteins in 4580 species: Archae - 168; Bacteria - 22290; Metazoa - 61642; Fungi - 10712; Plants - 85268; Viruses - 403; Other Eukaryotes - 24642 (source: NCBI BLink). & (p93194|rpk1_iponi : 370.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 285.0) no description available & (gnl|cdd|29142 : 162.0) no description available & (reliability: 1924.0) & (original description: Putative IKU2, Description = Receptor-like protein kinase HAIKU2, PFAM = PF00069;PF08263)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf04174_53349-59053' '(at1g17230 : 1209.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G63930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 504.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 261.0) no description available & (gnl|cdd|84488 : 140.0) no description available & (reliability: 2418.0) & (original description: Putative At1g17230, Description = Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230, PFAM = PF00069;PF00069;PF13855;PF08263)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf04253_413384-419077' '(at5g65700 : 1414.0) Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM2,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM1 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs.; BARELY ANY MERISTEM 1 (BAM1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT3G49670.1). & (p93194|rpk1_iponi : 464.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 279.0) no description available & (gnl|cdd|87344 : 149.0) no description available & (reliability: 2828.0) & (original description: Putative BAM1, Description = Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1, PFAM = PF13516;PF12799;PF08263;PF07714;PF13855)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf04609_38487-154850' '(at5g46330 : 158.0) Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB.; FLAGELLIN-SENSITIVE 2 (FLS2); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 139.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 108.0) no description available & (reliability: 306.0) & (original description: Putative PGSC0003DMG400004164, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF13855;PF00560)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf04609_150843-158580' '(at3g47570 : 542.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (p93194|rpk1_iponi : 422.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 235.0) no description available & (gnl|cdd|29142 : 146.0) no description available & (reliability: 1004.0) & (original description: Putative PGSC0003DMG400020848, Description = Non-specific serine/threonine protein kinase, PFAM = PF08263;PF13855;PF13855;PF13855;PF00560;PF00069)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf05190_53666-60062' '(at1g28440 : 1045.0) HAESA-like 1 (HSL1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT4G28490.1); Has 214855 Blast hits to 132793 proteins in 4138 species: Archae - 139; Bacteria - 23060; Metazoa - 65756; Fungi - 10225; Plants - 90032; Viruses - 401; Other Eukaryotes - 25242 (source: NCBI BLink). & (p93194|rpk1_iponi : 441.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 297.0) no description available & (gnl|cdd|29142 : 168.0) no description available & (reliability: 2090.0) & (original description: Putative grlk5, Description = Non-specific serine/threonine protein kinase, PFAM = PF00560;PF13855;PF13855;PF00069;PF08263)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf05896_261694-266888' '(at1g72180 : 985.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: HAESA-like 1 (TAIR:AT1G28440.1); Has 222922 Blast hits to 143384 proteins in 4612 species: Archae - 143; Bacteria - 22250; Metazoa - 69718; Fungi - 11673; Plants - 90830; Viruses - 408; Other Eukaryotes - 27900 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 356.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 278.0) no description available & (gnl|cdd|84488 : 171.0) no description available & (reliability: 1970.0) & (original description: Putative BnaC06g33240D, Description = Non-specific serine/threonine protein kinase, PFAM = PF08263;PF00069;PF13855;PF13855)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf06509_250173-256024' '(at5g25930 : 915.0) Protein kinase family protein with leucine-rich repeat domain; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor like protein 52 (TAIR:AT5G25910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 352.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 281.0) no description available & (gnl|cdd|29142 : 168.0) no description available & (reliability: 1830.0) & (original description: Putative Os02g0228300, Description = Os02g0228300 protein, PFAM = PF00069;PF08263;PF13855)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf07034_683089-686630' '(at1g35710 : 243.0) Protein kinase family protein with leucine-rich repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT4G08850.1); Has 304074 Blast hits to 147448 proteins in 4766 species: Archae - 178; Bacteria - 29187; Metazoa - 106993; Fungi - 12531; Plants - 120860; Viruses - 430; Other Eukaryotes - 33895 (source: NCBI BLink). & (p93194|rpk1_iponi : 214.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 128.0) no description available & (reliability: 464.0) & (original description: Putative PGSC0003DMG400003544, Description = Receptor-like protein kinase 2, PFAM = PF13855;PF13855;PF13855;PF13855;PF08263)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf07741_113589-119015' '(p93194|rpk1_iponi : 1325.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (at1g73080 : 949.0) Encodes a leucine-rich repeat receptor kinase. Functions as a receptor for AtPep1 to amplify innate immunity response to pathogen attacks.; PEP1 receptor 1 (PEPR1); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: response to jasmonic acid stimulus, protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, response to wounding, innate immune response; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: PEP1 receptor 2 (TAIR:AT1G17750.1); Has 241126 Blast hits to 137730 proteins in 4689 species: Archae - 172; Bacteria - 22281; Metazoa - 70921; Fungi - 11252; Plants - 107317; Viruses - 391; Other Eukaryotes - 28792 (source: NCBI BLink). & (gnl|cdd|36401 : 272.0) no description available & (gnl|cdd|29142 : 162.0) no description available & (reliability: 1898.0) & (original description: Putative INRPK1, Description = Receptor-like protein kinase, PFAM = PF08263;PF13855;PF00069)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf08308_413639-419081' '(at1g34110 : 1315.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT3G24240.1); Has 229810 Blast hits to 121355 proteins in 3638 species: Archae - 147; Bacteria - 18757; Metazoa - 70622; Fungi - 9447; Plants - 104379; Viruses - 381; Other Eukaryotes - 26077 (source: NCBI BLink). & (p93194|rpk1_iponi : 472.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 283.0) no description available & (gnl|cdd|84488 : 164.0) no description available & (reliability: 2630.0) & (original description: Putative upk, Description = Receptor-like protein kinase 2, PFAM = PF13855;PF13855;PF13855;PF00069;PF08263)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf08526_113851-119479' '(at1g34110 : 1230.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT3G24240.1); Has 229810 Blast hits to 121355 proteins in 3638 species: Archae - 147; Bacteria - 18757; Metazoa - 70622; Fungi - 9447; Plants - 104379; Viruses - 381; Other Eukaryotes - 26077 (source: NCBI BLink). & (p93194|rpk1_iponi : 454.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 290.0) no description available & (gnl|cdd|84488 : 163.0) no description available & (reliability: 2460.0) & (original description: Putative upk, Description = Receptor-like protein kinase 2, PFAM = PF08263;PF00069;PF13855;PF13855;PF13855;PF13855)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf09590_261530-267369' '(at5g63930 : 1193.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT2G33170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 372.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 317.0) no description available & (gnl|cdd|84488 : 166.0) no description available & (reliability: 2386.0) & (original description: Putative At2g33170, Description = Probable leucine-rich repeat receptor-like protein kinase At2g33170, PFAM = PF00069;PF00560;PF00560;PF08263)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf09708_82171-88465' '(at4g20270 : 1102.0) Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function.; BARELY ANY MERISTEM 3 (BAM3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: regulation of meristem growth, protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, leaf development, floral organ development; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G65700.2); Has 219938 Blast hits to 139586 proteins in 4977 species: Archae - 151; Bacteria - 21929; Metazoa - 70277; Fungi - 10656; Plants - 90391; Viruses - 423; Other Eukaryotes - 26111 (source: NCBI BLink). & (p93194|rpk1_iponi : 452.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 300.0) no description available & (gnl|cdd|84488 : 150.0) no description available & (reliability: 1996.0) & (original description: Putative BAM3, Description = Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3, PFAM = PF13855;PF00069;PF00560;PF08263)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf09774_1-5309' '(at1g28440 : 1013.0) HAESA-like 1 (HSL1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT4G28490.1); Has 214855 Blast hits to 132793 proteins in 4138 species: Archae - 139; Bacteria - 23060; Metazoa - 65756; Fungi - 10225; Plants - 90032; Viruses - 401; Other Eukaryotes - 25242 (source: NCBI BLink). & (p93194|rpk1_iponi : 424.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 299.0) no description available & (gnl|cdd|29142 : 164.0) no description available & (reliability: 2026.0) & (original description: Putative HSL1, Description = Receptor-like protein kinase HSL1, PFAM = PF13855;PF13855;PF13855;PF00069;PF08263)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf09924_149648-156073' '(at1g75820 : 1139.0) Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain.; CLAVATA 1 (CLV1); CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G65700.2); Has 209359 Blast hits to 134993 proteins in 4611 species: Archae - 138; Bacteria - 19949; Metazoa - 62202; Fungi - 10385; Plants - 91018; Viruses - 406; Other Eukaryotes - 25261 (source: NCBI BLink). & (p93194|rpk1_iponi : 434.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 291.0) no description available & (gnl|cdd|87344 : 158.0) no description available & (reliability: 2278.0) & (original description: Putative CLV1, Description = Receptor protein kinase CLAVATA1, PFAM = PF00560;PF13855;PF13855;PF13855;PF07714;PF08263)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf11535_205789-210622' '(at4g28650 : 1314.0) Leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, guard cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT1G08590.1); Has 236312 Blast hits to 142770 proteins in 4269 species: Archae - 150; Bacteria - 21752; Metazoa - 75925; Fungi - 11533; Plants - 97988; Viruses - 432; Other Eukaryotes - 28532 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 426.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 289.0) no description available & (gnl|cdd|84488 : 174.0) no description available & (reliability: 2628.0) & (original description: Putative MIK1, Description = MDIS1-interacting receptor like kinase 1, PFAM = PF08263;PF13855;PF13855;PF00069)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf12866_59404-62225' '(at2g25790 : 131.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT4G28650.1); Has 153683 Blast hits to 57628 proteins in 1967 species: Archae - 59; Bacteria - 14832; Metazoa - 38909; Fungi - 1966; Plants - 84929; Viruses - 21; Other Eukaryotes - 12967 (source: NCBI BLink). & (p93194|rpk1_iponi : 108.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 92.4) no description available & (reliability: 256.0) & (original description: Putative BnaCnng18680D, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF13855)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf14101_130157-135409' '(at1g09970 : 1104.0) RLK7 belongs to a leucine-rich repeat class of receptor-likekinase (LRR-RLKs). It is involved in the control of germination speed and the tolerance to oxidant stress.; LRR XI-23; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid autophosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G19700.1); Has 205125 Blast hits to 136515 proteins in 4580 species: Archae - 168; Bacteria - 22290; Metazoa - 61642; Fungi - 10712; Plants - 85268; Viruses - 403; Other Eukaryotes - 24642 (source: NCBI BLink). & (p93194|rpk1_iponi : 423.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 291.0) no description available & (gnl|cdd|29142 : 156.0) no description available & (reliability: 2208.0) & (original description: Putative BnaC08g13910D, Description = BnaC08g13910D protein, PFAM = PF00069;PF08263)' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf16622_251387-253743' '(at3g24240 : 176.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT5G48940.1); Has 246558 Blast hits to 135557 proteins in 3810 species: Archae - 176; Bacteria - 24262; Metazoa - 71588; Fungi - 10499; Plants - 111580; Viruses - 361; Other Eukaryotes - 28092 (source: NCBI BLink). & (p93194|rpk1_iponi : 89.4) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 352.0) & (original description: Putative upk, Description = Non-specific serine/threonine protein kinase, PFAM = )' T '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'niben101scf21140_133793-139269' '(at5g48940 : 1311.0) Leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; EXPRESSED IN: root, cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT3G24240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p93194|rpk1_iponi : 489.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 300.0) no description available & (gnl|cdd|88314 : 158.0) no description available & (reliability: 2622.0) & (original description: Putative RCH1, Description = LRR receptor-like serine/threonine-protein kinase RCH1, PFAM = PF00069;PF00560;PF13855;PF08263)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'nbv0.3scaffold34906_16809-22115' '(at4g08850 : 746.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein with leucine-rich repeat domain (TAIR:AT1G35710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 437.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 234.0) no description available & (gnl|cdd|29142 : 148.0) no description available & (reliability: 1492.0) & (original description: Putative glysoja_001037, Description = Putative LRR receptor-like serine/threonine-protein kinase, PFAM = PF00069;PF08263;PF13855;PF13855)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'nbv0.3scaffold42015_5419-10960' '(at3g47570 : 775.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (p93194|rpk1_iponi : 352.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 264.0) no description available & (gnl|cdd|29142 : 148.0) no description available & (reliability: 1550.0) & (original description: Putative At3g47570, Description = Probable LRR receptor-like serine/threonine-protein kinase At3g47570, PFAM = PF13855;PF13855;PF00069;PF08263)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'nbv0.3scaffold46713_1-2367' '(at1g35710 : 137.0) Protein kinase family protein with leucine-rich repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT4G08850.1); Has 304074 Blast hits to 147448 proteins in 4766 species: Archae - 178; Bacteria - 29187; Metazoa - 106993; Fungi - 12531; Plants - 120860; Viruses - 430; Other Eukaryotes - 33895 (source: NCBI BLink). & (p93194|rpk1_iponi : 128.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 91.6) no description available & (reliability: 274.0) & (original description: Putative PGSC0003DMG400004164, Description = Non-specific serine/threonine protein kinase, PFAM = PF00560;PF13855;PF13855)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'nbv0.3scaffold50850_98-5656' '(at3g47570 : 347.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (gnl|cdd|36401 : 255.0) no description available & (gnl|cdd|47549 : 163.0) no description available & (q8lpb4|pskr_dauca : 159.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 694.0) & (original description: Putative MTR_8g470950, Description = LRR receptor-like kinase family protein, PFAM = PF00560;PF13855;PF00069)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'nbv0.3scaffold62080_1-5587' '(at3g47090 : 545.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 208488 Blast hits to 131556 proteins in 4837 species: Archae - 167; Bacteria - 21304; Metazoa - 66210; Fungi - 9769; Plants - 86245; Viruses - 308; Other Eukaryotes - 24485 (source: NCBI BLink). & (p93194|rpk1_iponi : 419.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 231.0) no description available & (gnl|cdd|29142 : 146.0) no description available & (reliability: 1090.0) & (original description: Putative PGSC0003DMG400028438, Description = Non-specific serine/threonine protein kinase, PFAM = PF08263;PF13855;PF13855;PF13855;PF13855;PF00560;PF00560;PF00069)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'nbv0.5scaffold1691_400106-405803' '(at3g47570 : 719.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (p93194|rpk1_iponi : 348.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 257.0) no description available & (gnl|cdd|84488 : 149.0) no description available & (reliability: 1438.0) & (original description: Putative PGSC0003DMG400011932, Description = LRR receptor-like kinase family protein, PFAM = PF00069;PF08263;PF00560)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'nbv0.5scaffold1981_341992-346485' '(at4g08850 : 683.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein with leucine-rich repeat domain (TAIR:AT1G35710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 355.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 245.0) no description available & (gnl|cdd|29142 : 154.0) no description available & (reliability: 1366.0) & (original description: Putative MIK2, Description = LRR receptor-like kinase family protein, PFAM = PF13855;PF00560;PF00069)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'nbv0.5scaffold2003_210328-234868' '(at3g47570 : 424.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (gnl|cdd|36401 : 243.0) no description available & (p93194|rpk1_iponi : 182.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|47549 : 152.0) no description available & (reliability: 848.0) & (original description: Putative PGSC0003DMG400001016, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF13855;PF00069;PF00560)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'nbv0.5scaffold2045_38401-43757' '(at3g47570 : 756.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 302.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 265.0) no description available & (gnl|cdd|84488 : 147.0) no description available & (reliability: 1512.0) & (original description: Putative At3g47570, Description = Probable LRR receptor-like serine/threonine-protein kinase At3g47570, PFAM = PF00069;PF13855;PF13855;PF08263)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'nbv0.5scaffold2283_291131-320451' '(at4g08850 : 589.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein with leucine-rich repeat domain (TAIR:AT1G35710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 359.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35693 : 126.0) no description available & (reliability: 1178.0) & (original description: Putative MTR_090s0057, Description = Receptor protein kinase-like protein, PFAM = PF13855;PF13855;PF13855;PF07714;PF08263)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'nbv0.5scaffold3524_82925-86523' '(at5g20480 : 150.0) Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.; EF-TU receptor (EFR); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47090.1); Has 211073 Blast hits to 132033 proteins in 4602 species: Archae - 167; Bacteria - 19808; Metazoa - 69159; Fungi - 9873; Plants - 87247; Viruses - 333; Other Eukaryotes - 24486 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 132.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35665 : 91.6) no description available & (reliability: 300.0) & (original description: Putative PGSC0003DMG400007611, Description = Non-specific serine/threonine protein kinase, PFAM = PF08263;PF13855;PF13855)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'nbv0.5scaffold5712_3404-11141' '(at3g47570 : 544.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (p93194|rpk1_iponi : 425.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 235.0) no description available & (gnl|cdd|29142 : 147.0) no description available & (reliability: 1088.0) & (original description: Putative PGSC0003DMG400010351, Description = Non-specific serine/threonine protein kinase, PFAM = PF08263;PF00069;PF13855;PF13855;PF13855;PF00560)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'nbv0.5scaffold5712_8022-34780' '(at5g46330 : 160.0) Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB.; FLAGELLIN-SENSITIVE 2 (FLS2); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 147.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 107.0) no description available & (reliability: 320.0) & (original description: Putative PGSC0003DMG400001016, Description = Non-specific serine/threonine protein kinase, PFAM = PF00560;PF13855;PF13855)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben044scf00001917ctg003_4073-6977' '(at5g20480 : 166.0) Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.; EF-TU receptor (EFR); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47090.1); Has 211073 Blast hits to 132033 proteins in 4602 species: Archae - 167; Bacteria - 19808; Metazoa - 69159; Fungi - 9873; Plants - 87247; Viruses - 333; Other Eukaryotes - 24486 (source: NCBI BLink). & (p93194|rpk1_iponi : 124.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 332.0) & (original description: Putative TRKe, Description = Non-specific serine/threonine protein kinase, PFAM = PF08263;PF13855)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben044scf00004388ctg037_425-3909' '(at3g24240 : 134.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT5G48940.1); Has 246558 Blast hits to 135557 proteins in 3810 species: Archae - 176; Bacteria - 24262; Metazoa - 71588; Fungi - 10499; Plants - 111580; Viruses - 361; Other Eukaryotes - 28092 (source: NCBI BLink). & (p93194|rpk1_iponi : 129.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 94.3) no description available & (reliability: 268.0) & (original description: Putative PGSC0003DMG400001016, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF13516)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben044scf00018922ctg007_2347-6433' '(at3g47090 : 378.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 208488 Blast hits to 131556 proteins in 4837 species: Archae - 167; Bacteria - 21304; Metazoa - 66210; Fungi - 9769; Plants - 86245; Viruses - 308; Other Eukaryotes - 24485 (source: NCBI BLink). & (gnl|cdd|36401 : 226.0) no description available & (p93194|rpk1_iponi : 150.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|47550 : 138.0) no description available & (reliability: 756.0) & (original description: Putative At3g47090, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF07714)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben044scf00024381ctg005_10017-12780' '(at5g20480 : 129.0) Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.; EF-TU receptor (EFR); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47090.1); Has 211073 Blast hits to 132033 proteins in 4602 species: Archae - 167; Bacteria - 19808; Metazoa - 69159; Fungi - 9873; Plants - 87247; Viruses - 333; Other Eukaryotes - 24486 (source: NCBI BLink). & (p93194|rpk1_iponi : 90.5) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 258.0) & (original description: Putative TRKe, Description = Non-specific serine/threonine protein kinase, PFAM = PF00560;PF08263;PF13855)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben044scf00040589ctg002_2254-6157' '(at4g08850 : 518.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein with leucine-rich repeat domain (TAIR:AT1G35710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 286.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 167.0) no description available & (gnl|cdd|87344 : 106.0) no description available & (reliability: 1036.0) & (original description: Putative BnaC05g27560D, Description = BnaC05g27560D protein, PFAM = PF07714;PF12799;PF13855)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben044scf00053594ctg002_1-2876' '(at3g47090 : 182.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 208488 Blast hits to 131556 proteins in 4837 species: Archae - 167; Bacteria - 21304; Metazoa - 66210; Fungi - 9769; Plants - 86245; Viruses - 308; Other Eukaryotes - 24485 (source: NCBI BLink). & (p93194|rpk1_iponi : 158.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 83.2) no description available & (reliability: 364.0) & (original description: Putative TCM_031965, Description = Serine-threonine protein kinase, PFAM = PF00560;PF08263;PF13855;PF13855)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf00239_928917-935693' '(at3g47570 : 512.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (p93194|rpk1_iponi : 436.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 252.0) no description available & (gnl|cdd|87344 : 159.0) no description available & (reliability: 1024.0) & (original description: Putative PGSC0003DMG400022000, Description = Non-specific serine/threonine protein kinase, PFAM = PF00069;PF08263;PF13855;PF13855;PF13855;PF13855)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf00348_130426-133969' '(at3g47570 : 359.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (gnl|cdd|36401 : 257.0) no description available & (q8lpb4|pskr_dauca : 246.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 159.0) no description available & (reliability: 718.0) & (original description: Putative PGSC0003DMG400015081, Description = Non-specific serine/threonine protein kinase, PFAM = PF00069;PF13855)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf00887_348102-353310' '(at3g47570 : 800.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 361.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 264.0) no description available & (gnl|cdd|29142 : 143.0) no description available & (reliability: 1600.0) & (original description: Putative At3g47570, Description = Probable LRR receptor-like serine/threonine-protein kinase At3g47570, PFAM = PF13855;PF13855;PF13855;PF08263;PF00069;PF00560)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf00894_312158-317710' '(at3g47570 : 529.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (p93194|rpk1_iponi : 395.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 258.0) no description available & (gnl|cdd|87344 : 153.0) no description available & (reliability: 1058.0) & (original description: Putative PGSC0003DMG400018752, Description = Leucine-rich repeat protein kinase family protein, putative, PFAM = PF13855;PF13855;PF08263;PF00069)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf00894_312814-315511' '(at3g47570 : 320.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (p93194|rpk1_iponi : 196.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 186.0) no description available & (gnl|cdd|84488 : 124.0) no description available & (reliability: 640.0) & (original description: Putative PGSC0003DMG400001016, Description = Non-specific serine/threonine protein kinase, PFAM = PF00069;PF13855)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf01071_243515-248291' '(at4g08850 : 623.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein with leucine-rich repeat domain (TAIR:AT1G35710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 344.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 256.0) no description available & (gnl|cdd|47550 : 157.0) no description available & (reliability: 1246.0) & (original description: Putative PnLRK1, Description = Leucine-rich repeat receptor-like protein kinase 1, PFAM = PF00560;PF00069;PF08263)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf01203_43268-106447' '(at3g47570 : 543.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (p93194|rpk1_iponi : 381.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 245.0) no description available & (gnl|cdd|84488 : 156.0) no description available & (reliability: 1086.0) & (original description: Putative glysoja_018717, Description = LRR receptor-like serine/threonine-protein kinase GSO1, PFAM = PF13855;PF13855;PF13855;PF00069;PF08263)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf01382_645036-650241' '(at2g24130 : 1017.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47570.1); Has 211952 Blast hits to 136025 proteins in 5092 species: Archae - 179; Bacteria - 23123; Metazoa - 70875; Fungi - 10647; Plants - 82602; Viruses - 325; Other Eukaryotes - 24201 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 250.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 236.0) no description available & (gnl|cdd|29142 : 153.0) no description available & (reliability: 2034.0) & (original description: Putative At2g24130, Description = Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130, PFAM = PF08263;PF00069;PF00560;PF13516;PF13516;PF13855;PF13855;PF13855)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf01694_903852-906262' '(at3g47090 : 91.7) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 208488 Blast hits to 131556 proteins in 4837 species: Archae - 167; Bacteria - 21304; Metazoa - 66210; Fungi - 9769; Plants - 86245; Viruses - 308; Other Eukaryotes - 24485 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative At3g47090, Description = Non-specific serine/threonine protein kinase, PFAM = PF07714)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf01785_994944-1000890' '(at5g46330 : 1054.0) Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB.; FLAGELLIN-SENSITIVE 2 (FLS2); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 461.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 271.0) no description available & (gnl|cdd|84488 : 161.0) no description available & (reliability: 2108.0) & (original description: Putative FLS2, Description = LRR receptor-like serine/threonine-protein kinase FLS2, PFAM = PF00560;PF13855;PF13855;PF13855;PF08263;PF00069;PF13516;PF13516)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf01917_397611-400630' '(at1g33590 : 132.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction, response to karrikin, defense response; LOCATED IN: cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G33600.1); Has 74647 Blast hits to 28620 proteins in 1034 species: Archae - 16; Bacteria - 6743; Metazoa - 19007; Fungi - 704; Plants - 43140; Viruses - 2; Other Eukaryotes - 5035 (source: NCBI BLink). & (gnl|cdd|35665 : 105.0) no description available & (p93194|rpk1_iponi : 93.6) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 244.0) & (original description: Putative Shy, Description = Leucine rich repeat protein, PFAM = PF13855;PF00560;PF00560;PF00560;PF00560;PF08263)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf02156_1448384-1453906' '(at5g46330 : 541.0) Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB.; FLAGELLIN-SENSITIVE 2 (FLS2); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 396.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 243.0) no description available & (gnl|cdd|47550 : 143.0) no description available & (reliability: 1082.0) & (original description: Putative PGSC0003DMG400010351, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF13855;PF13855;PF13855;PF00069;PF08263)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf02156_1451231-1454579' '(gnl|cdd|36401 : 147.0) no description available & (at3g47570 : 145.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (p93194|rpk1_iponi : 105.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|29142 : 87.6) no description available & (reliability: 290.0) & (original description: Putative PGSC0003DMG400001016, Description = LRR-RLK, PFAM = PF00069)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf02174_15095-17589' '(at4g08850 : 136.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein with leucine-rich repeat domain (TAIR:AT1G35710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 120.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 272.0) & (original description: Putative PGSC0003DMG400004164, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf02373_385642-389545' '(at4g08850 : 553.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein with leucine-rich repeat domain (TAIR:AT1G35710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 295.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 167.0) no description available & (gnl|cdd|87344 : 106.0) no description available & (reliability: 1106.0) & (original description: Putative BnaC05g27560D, Description = BnaC05g27560D protein, PFAM = PF13855;PF07714;PF00560)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf02373_387831-390289' '(at4g08850 : 152.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein with leucine-rich repeat domain (TAIR:AT1G35710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative EILP, Description = LRR-RLK, PFAM = PF08263;PF13516)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf02531_69217-76450' '(at4g20140 : 512.0) Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis.; GASSHO1 (GSO1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, embryo development, epidermis development; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT5G44700.1); Has 301150 Blast hits to 144127 proteins in 5007 species: Archae - 193; Bacteria - 28594; Metazoa - 96322; Fungi - 11667; Plants - 129816; Viruses - 411; Other Eukaryotes - 34147 (source: NCBI BLink). & (p93194|rpk1_iponi : 421.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 246.0) no description available & (gnl|cdd|84488 : 161.0) no description available & (reliability: 1024.0) & (original description: Putative PGSC0003DMG400028474, Description = Leucine-rich repeat protein kinase family protein, putative, PFAM = PF08263;PF00069;PF13855;PF13855;PF13855;PF13855)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf02531_112917-119750' '(at3g47570 : 514.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (p93194|rpk1_iponi : 330.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 251.0) no description available & (gnl|cdd|84488 : 161.0) no description available & (reliability: 1028.0) & (original description: Putative glysoja_018717, Description = LRR receptor-like serine/threonine-protein kinase GSO1, PFAM = PF00069;PF08263;PF13855;PF13855;PF13855)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf02827_745017-750171' '(at3g47570 : 697.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (p93194|rpk1_iponi : 339.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 247.0) no description available & (gnl|cdd|47550 : 146.0) no description available & (reliability: 1394.0) & (original description: Putative RCOM_0066150, Description = Receptor-kinase, putative, PFAM = PF13855;PF08263;PF00069)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf03329_252538-257463' '(at3g47570 : 676.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (p93194|rpk1_iponi : 286.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 246.0) no description available & (gnl|cdd|29142 : 147.0) no description available & (reliability: 1352.0) & (original description: Putative BnaA09g32250D, Description = BnaA09g32250D protein, PFAM = PF00560;PF00560;PF00069;PF08263;PF13855)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf03365_531187-537057' '(at4g08850 : 674.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein with leucine-rich repeat domain (TAIR:AT1G35710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 500.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 274.0) no description available & (gnl|cdd|29142 : 174.0) no description available & (reliability: 1348.0) & (original description: Putative Os10g0468500, Description = Leucine Rich Repeat family protein, expressed, PFAM = PF00560;PF08263;PF00069;PF13855;PF13855;PF13855;PF13855;PF13855)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf03374_795938-800864' '(at3g47570 : 450.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 318.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 255.0) no description available & (gnl|cdd|47549 : 163.0) no description available & (reliability: 900.0) & (original description: Putative PGSC0003DMG400001016, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF13855;PF00069;PF00560)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf03374_796088-800276' '(at3g47570 : 347.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 244.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 236.0) no description available & (gnl|cdd|87344 : 153.0) no description available & (reliability: 694.0) & (original description: Putative PGSC0003DMG400015081, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF00069)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf03374_800277-802648' '(at5g39390 : 91.3) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: EF-TU receptor (TAIR:AT5G20480.1); Has 105441 Blast hits to 101727 proteins in 4175 species: Archae - 121; Bacteria - 11886; Metazoa - 36736; Fungi - 8087; Plants - 34277; Viruses - 298; Other Eukaryotes - 14036 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative PGSC0003DMG400001016, Description = LRR-RLK, PFAM = PF08263)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf03455_145964-149884' '(at5g46330 : 1083.0) Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB.; FLAGELLIN-SENSITIVE 2 (FLS2); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 477.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 268.0) no description available & (gnl|cdd|29142 : 158.0) no description available & (reliability: 2166.0) & (original description: Putative FLS2, Description = Flagellin-sensing 2-like protein, PFAM = PF08263;PF13855;PF00069)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf04094_362146-412815' '(at4g08850 : 93.2) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein with leucine-rich repeat domain (TAIR:AT1G35710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative MIK2, Description = Leucine-rich repeat receptor-like protein kinase family protein, putative, PFAM = PF07714)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf04094_410372-418730' '(at4g08850 : 737.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein with leucine-rich repeat domain (TAIR:AT1G35710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 432.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 233.0) no description available & (gnl|cdd|29142 : 149.0) no description available & (reliability: 1474.0) & (original description: Putative glysoja_001037, Description = Putative LRR receptor-like serine/threonine-protein kinase, PFAM = PF08263;PF00069;PF13855;PF13855)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf04191_252157-256073' '(at4g08850 : 293.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein with leucine-rich repeat domain (TAIR:AT1G35710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 268.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35693 : 132.0) no description available & (reliability: 586.0) & (original description: Putative PGPS/D4, Description = Putative LRR receptor-like serine/threonine-protein kinase At4g08850 family, PFAM = PF08263;PF00560;PF00560;PF13855;PF13855;PF13855;PF13855)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf04350_3298-6284' '(at5g20480 : 168.0) Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.; EF-TU receptor (EFR); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47090.1); Has 211073 Blast hits to 132033 proteins in 4602 species: Archae - 167; Bacteria - 19808; Metazoa - 69159; Fungi - 9873; Plants - 87247; Viruses - 333; Other Eukaryotes - 24486 (source: NCBI BLink). & (p93194|rpk1_iponi : 124.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 336.0) & (original description: Putative TRKe, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF08263)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf04609_38487-154850' '(at5g46330 : 158.0) Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB.; FLAGELLIN-SENSITIVE 2 (FLS2); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 139.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 108.0) no description available & (reliability: 316.0) & (original description: Putative PGSC0003DMG400004164, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF13855;PF00560)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf04609_150843-158580' '(at3g47570 : 542.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (p93194|rpk1_iponi : 422.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 235.0) no description available & (gnl|cdd|29142 : 146.0) no description available & (reliability: 1084.0) & (original description: Putative PGSC0003DMG400020848, Description = Non-specific serine/threonine protein kinase, PFAM = PF08263;PF13855;PF13855;PF13855;PF00560;PF00069)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf05177_279590-284788' '(at3g47570 : 690.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (p93194|rpk1_iponi : 336.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 263.0) no description available & (gnl|cdd|87344 : 152.0) no description available & (reliability: 1380.0) & (original description: Putative PGSC0003DMG400030443, Description = Alkyl transferase, PFAM = PF08263;PF00069;PF00560;PF00560;PF13855)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf05516_84541-90431' '(at4g08850 : 693.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein with leucine-rich repeat domain (TAIR:AT1G35710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 509.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 267.0) no description available & (gnl|cdd|29142 : 174.0) no description available & (reliability: 1386.0) & (original description: Putative PGSC0003DMG400003790, Description = Putative LRR receptor-like serine/threonine-protein kinase, PFAM = PF08263;PF13855;PF13855;PF00069;PF00560)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf05811_164576-166925' '(at5g20480 : 131.0) Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.; EF-TU receptor (EFR); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47090.1); Has 211073 Blast hits to 132033 proteins in 4602 species: Archae - 167; Bacteria - 19808; Metazoa - 69159; Fungi - 9873; Plants - 87247; Viruses - 333; Other Eukaryotes - 24486 (source: NCBI BLink). & (p93194|rpk1_iponi : 105.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 262.0) & (original description: Putative TCM_036169, Description = Receptor like protein 33, PFAM = PF08263;PF00560)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf05811_862887-868804' '(at5g46330 : 525.0) Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB.; FLAGELLIN-SENSITIVE 2 (FLS2); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 427.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 235.0) no description available & (gnl|cdd|47549 : 140.0) no description available & (reliability: 1050.0) & (original description: Putative PGSC0003DMG400010351, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF13855;PF00069;PF08263)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf06774_222372-225202' '(at5g20480 : 146.0) Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.; EF-TU receptor (EFR); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47090.1); Has 211073 Blast hits to 132033 proteins in 4602 species: Archae - 167; Bacteria - 19808; Metazoa - 69159; Fungi - 9873; Plants - 87247; Viruses - 333; Other Eukaryotes - 24486 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 100.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 292.0) & (original description: Putative PGSC0003DMG400006065, Description = Non-specific serine/threonine protein kinase, PFAM = PF08263;PF13855)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf06774_224669-227741' '(gnl|cdd|36401 : 272.0) no description available & (at3g47580 : 244.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47090.1); Has 205192 Blast hits to 128567 proteins in 4736 species: Archae - 173; Bacteria - 19530; Metazoa - 65101; Fungi - 9747; Plants - 86373; Viruses - 300; Other Eukaryotes - 23968 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 176.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 152.0) no description available & (reliability: 488.0) & (original description: Putative PGSC0003DMG402023640, Description = Non-specific serine/threonine protein kinase, PFAM = PF00069)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf07034_683089-686630' '(at1g35710 : 243.0) Protein kinase family protein with leucine-rich repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT4G08850.1); Has 304074 Blast hits to 147448 proteins in 4766 species: Archae - 178; Bacteria - 29187; Metazoa - 106993; Fungi - 12531; Plants - 120860; Viruses - 430; Other Eukaryotes - 33895 (source: NCBI BLink). & (p93194|rpk1_iponi : 214.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 128.0) no description available & (reliability: 486.0) & (original description: Putative PGSC0003DMG400003544, Description = Receptor-like protein kinase 2, PFAM = PF13855;PF13855;PF13855;PF13855;PF08263)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf07123ctg010_2215-5124' '(at1g35710 : 457.0) Protein kinase family protein with leucine-rich repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT4G08850.1); Has 304074 Blast hits to 147448 proteins in 4766 species: Archae - 178; Bacteria - 29187; Metazoa - 106993; Fungi - 12531; Plants - 120860; Viruses - 430; Other Eukaryotes - 33895 (source: NCBI BLink). & (p93194|rpk1_iponi : 326.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35693 : 157.0) no description available & (reliability: 914.0) & (original description: Putative EILP, Description = Elicitor-inducible LRR receptor-like protein EILP, PFAM = PF08263;PF13855;PF13855)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf07463_198155-201846' '(at3g47570 : 246.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (p93194|rpk1_iponi : 173.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 103.0) no description available & (reliability: 492.0) & (original description: Putative PGSC0003DMG400000996, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF08263;PF00560)' T '30.2.12' 'signalling.receptor kinases.leucine rich repeat XII' 'niben101scf12866_59404-62225' '(at2g25790 : 131.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT4G28650.1); Has 153683 Blast hits to 57628 proteins in 1967 species: Archae - 59; Bacteria - 14832; Metazoa - 38909; Fungi - 1966; Plants - 84929; Viruses - 21; Other Eukaryotes - 12967 (source: NCBI BLink). & (p93194|rpk1_iponi : 108.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 92.4) no description available & (reliability: 248.0) & (original description: Putative BnaCnng18680D, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF13855)' T '30.2.13' 'signalling.receptor kinases.leucine rich repeat XIII' 'nbv0.3scaffold56388_528-15589' '(at2g35620 : 838.0) Encodes a plasma membrane localized leucine-rich repeat receptor kinase that is involved in cell wall elongation. Loss of function mutations of FEI1 and FEI2 exhibit defects in root and hypocotyl cell elongation. Double mutants are defective in cell wall biosynthesis and have thick hypocotyls, and short, thick roots.; FEI 2 (FEI2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G31420.2). & (gnl|cdd|36401 : 304.0) no description available & (q8lpb4|pskr_dauca : 301.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 163.0) no description available & (reliability: 1676.0) & (original description: Putative FEI1, Description = LRR receptor-like serine/threonine-protein kinase FEI 1, PFAM = PF13855;PF08263;PF00069)' T '30.2.13' 'signalling.receptor kinases.leucine rich repeat XIII' 'nbv0.5scaffold2638_206516-210410' '(at1g78530 : 442.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G31420.2); Has 119357 Blast hits to 118005 proteins in 4373 species: Archae - 119; Bacteria - 14010; Metazoa - 43545; Fungi - 10336; Plants - 33459; Viruses - 443; Other Eukaryotes - 17445 (source: NCBI BLink). & (gnl|cdd|36401 : 283.0) no description available & (q8lpb4|pskr_dauca : 214.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 139.0) no description available & (reliability: 884.0) & (original description: Putative At1g78530, Description = Receptor-like serine/threonine-protein kinase At1g78530, PFAM = PF00069;PF00069)' T '30.2.13' 'signalling.receptor kinases.leucine rich repeat XIII' 'niben044scf00032709ctg000_2565-16191' '(at2g35620 : 813.0) Encodes a plasma membrane localized leucine-rich repeat receptor kinase that is involved in cell wall elongation. Loss of function mutations of FEI1 and FEI2 exhibit defects in root and hypocotyl cell elongation. Double mutants are defective in cell wall biosynthesis and have thick hypocotyls, and short, thick roots.; FEI 2 (FEI2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G31420.2). & (gnl|cdd|36401 : 302.0) no description available & (q8lpb4|pskr_dauca : 248.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 162.0) no description available & (reliability: 1626.0) & (original description: Putative FEI1, Description = LRR receptor-like serine/threonine-protein kinase FEI 1, PFAM = PF00069;PF08263;PF13855)' T '30.2.13' 'signalling.receptor kinases.leucine rich repeat XIII' 'niben044scf00056913ctg001_14-14633' '(at2g35620 : 642.0) Encodes a plasma membrane localized leucine-rich repeat receptor kinase that is involved in cell wall elongation. Loss of function mutations of FEI1 and FEI2 exhibit defects in root and hypocotyl cell elongation. Double mutants are defective in cell wall biosynthesis and have thick hypocotyls, and short, thick roots.; FEI 2 (FEI2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G31420.2). & (gnl|cdd|36401 : 265.0) no description available & (q8lpb4|pskr_dauca : 220.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 154.0) no description available & (reliability: 1284.0) & (original description: Putative At1g78530, Description = Receptor-like serine/threonine-protein kinase At1g78530, PFAM = PF00069;PF08263)' T '30.2.13' 'signalling.receptor kinases.leucine rich repeat XIII' 'niben101scf00168_377573-379315' '(at3g56100 : 91.7) Protein kinase expressed in meristematic cells. Phosphorylates AGL24.; meristematic receptor-like kinase (MRLK); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: inflorescence meristem receptor-like kinase 2 (TAIR:AT3G51740.1); Has 154347 Blast hits to 110289 proteins in 3296 species: Archae - 124; Bacteria - 13554; Metazoa - 45622; Fungi - 8090; Plants - 69121; Viruses - 344; Other Eukaryotes - 17492 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative PGSC0003DMG400005590, Description = Receptor like protein 15, putative, PFAM = PF00560;PF00560)' T '30.2.13' 'signalling.receptor kinases.leucine rich repeat XIII' 'niben101scf00177_911277-919523' '(gnl|cdd|36401 : 267.0) no description available & (at5g40380 : 194.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (CRK42); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (TAIR:AT1G70530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29142 : 172.0) no description available & (o24585|cri4_maize : 158.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 354.0) & (original description: Putative Sb08g000610, Description = Putative uncharacterized protein Sb08g000610, PFAM = PF00069)' T '30.2.13' 'signalling.receptor kinases.leucine rich repeat XIII' 'niben101scf01983_154303-158197' '(at1g78530 : 491.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G31420.2); Has 119357 Blast hits to 118005 proteins in 4373 species: Archae - 119; Bacteria - 14010; Metazoa - 43545; Fungi - 10336; Plants - 33459; Viruses - 443; Other Eukaryotes - 17445 (source: NCBI BLink). & (gnl|cdd|36401 : 318.0) no description available & (q8lpb4|pskr_dauca : 245.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 164.0) no description available & (reliability: 982.0) & (original description: Putative At1g78530, Description = Receptor-like serine/threonine-protein kinase At1g78530, PFAM = PF00069)' T '30.2.13' 'signalling.receptor kinases.leucine rich repeat XIII' 'niben101scf02174_15095-17589' '(at4g08850 : 136.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein with leucine-rich repeat domain (TAIR:AT1G35710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 120.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 248.0) & (original description: Putative PGSC0003DMG400004164, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855)' T '30.2.13' 'signalling.receptor kinases.leucine rich repeat XIII' 'niben101scf03619_334875-348865' '(at2g35620 : 846.0) Encodes a plasma membrane localized leucine-rich repeat receptor kinase that is involved in cell wall elongation. Loss of function mutations of FEI1 and FEI2 exhibit defects in root and hypocotyl cell elongation. Double mutants are defective in cell wall biosynthesis and have thick hypocotyls, and short, thick roots.; FEI 2 (FEI2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G31420.2). & (gnl|cdd|36401 : 303.0) no description available & (q8lpb4|pskr_dauca : 300.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 163.0) no description available & (reliability: 1692.0) & (original description: Putative FEI1, Description = LRR receptor-like serine/threonine-protein kinase FEI 1, PFAM = PF08263;PF13855;PF00069)' T '30.2.13' 'signalling.receptor kinases.leucine rich repeat XIII' 'niben101scf03907_186612-194318' '(at5g62230 : 1343.0) Encodes a receptor-like kinase that, together with ER and ERL2 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. Along with erl2 functionally compensates for loss of erecta during integument development.; ERECTA-like 1 (ERL1); FUNCTIONS IN: kinase activity; INVOLVED IN: stomatal complex morphogenesis, embryo sac development, ovule development; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: ERECTA-like 2 (TAIR:AT5G07180.1). & (p93194|rpk1_iponi : 402.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 321.0) no description available & (gnl|cdd|29142 : 162.0) no description available & (reliability: 2686.0) & (original description: Putative ERL1, Description = LRR receptor-like serine/threonine-protein kinase ERL1, PFAM = PF13855;PF13855;PF08263;PF13516;PF13516;PF00069)' T '30.2.13' 'signalling.receptor kinases.leucine rich repeat XIII' 'niben101scf03925_203933-207326' '(at3g05660 : 88.2) receptor like protein 33 (RLP33); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 32 (TAIR:AT3G05650.1); Has 122499 Blast hits to 32804 proteins in 1196 species: Archae - 55; Bacteria - 8957; Metazoa - 28470; Fungi - 1471; Plants - 73451; Viruses - 13; Other Eukaryotes - 10082 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative Eix1, Description = EIX receptor 1, PFAM = PF00560;PF13855;PF08263)' T '30.2.13' 'signalling.receptor kinases.leucine rich repeat XIII' 'niben101scf07054_238525-266461' '(at1g31420 : 884.0) Encodes a plasma membrane localized leucine-rich repeat receptor kinase that is involved in cell wall elongation. Loss of function mutations of FEI1 and FEI2 exhibit defects in root and hypocotyl cell elongation. Double mutants are defective in cell wall biosynthesis and have thick hypocotyls, and short, thick roots.; FEI 1 (FEI1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, plant-type cell wall organization, unidimensional cell growth; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G35620.2). & (q8lpb4|pskr_dauca : 310.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 309.0) no description available & (gnl|cdd|29142 : 166.0) no description available & (reliability: 1768.0) & (original description: Putative FEI1, Description = LRR receptor-like serine/threonine-protein kinase FEI 1, PFAM = PF08263;PF00069)' T '30.2.13' 'signalling.receptor kinases.leucine rich repeat XIII' 'niben101scf07395_119301-126556' '(at5g62710 : 932.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G31420.2); Has 175257 Blast hits to 128076 proteins in 4599 species: Archae - 150; Bacteria - 15408; Metazoa - 46877; Fungi - 10024; Plants - 81619; Viruses - 466; Other Eukaryotes - 20713 (source: NCBI BLink). & (gnl|cdd|36401 : 320.0) no description available & (q8lpb4|pskr_dauca : 307.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 173.0) no description available & (reliability: 1864.0) & (original description: Putative FEI1, Description = LRR receptor-like serine/threonine-protein kinase FEI 1, PFAM = PF00069;PF08263;PF00560)' T '30.2.13' 'signalling.receptor kinases.leucine rich repeat XIII' 'niben101scf12866_59404-62225' '(at2g25790 : 131.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT4G28650.1); Has 153683 Blast hits to 57628 proteins in 1967 species: Archae - 59; Bacteria - 14832; Metazoa - 38909; Fungi - 1966; Plants - 84929; Viruses - 21; Other Eukaryotes - 12967 (source: NCBI BLink). & (p93194|rpk1_iponi : 108.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 92.4) no description available & (reliability: 246.0) & (original description: Putative BnaCnng18680D, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF13855)' T '30.2.13' 'signalling.receptor kinases.leucine rich repeat XIII' 'niben101scf20268_24576-32580' '(at2g26330 : 1441.0) Homologous to receptor protein kinases. Involved in specification of organs originating from the shoot apical meristem. Contains a cytoplasmic protein kinase catalytic domain, a transmembrane region, and an extracellular leucine-rich repeat. ER has been identified as a quantitative trait locus for transpiration efficiency by influencing epidermal and mesophyll development, stomatal density and porosity of leaves. It has been implicated in resistance to the bacterium Ralstonia solanacearum and to the necrotrophic fungus Plectosphaerella cucumerina. Together with ERL1 and ERL2, ER governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes.; ERECTA (ER); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ERECTA-like 2 (TAIR:AT5G07180.1); Has 231155 Blast hits to 140492 proteins in 4172 species: Archae - 144; Bacteria - 21921; Metazoa - 82313; Fungi - 10847; Plants - 87687; Viruses - 446; Other Eukaryotes - 27797 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 358.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|36401 : 319.0) no description available & (gnl|cdd|47549 : 157.0) no description available & (reliability: 2882.0) & (original description: Putative ERECTA, Description = LRR receptor-like serine/threonine-protein kinase ERECTA, PFAM = PF13855;PF13855;PF00069;PF08263)' T '30.2.14' 'signalling.receptor kinases.leucine rich repeat XIV' 'nbv0.3scaffold24929_20269-29029' '(at2g16250 : 717.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT4G39270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 222.0) no description available & (q8lpb4|pskr_dauca : 143.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 92.6) no description available & (reliability: 1434.0) & (original description: Putative At2g16250, Description = Probable LRR receptor-like serine/threonine-protein kinase At2g16250, PFAM = PF07714;PF13855;PF13855)' T '30.2.14' 'signalling.receptor kinases.leucine rich repeat XIV' 'nbv0.5scaffold617_596943-599582' '(at2g16250 : 191.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT4G39270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative PXL1, Description = Putative LRR receptor-like serine/threonine-protein kinase, PFAM = PF00560;PF08263;PF13855)' T '30.2.14' 'signalling.receptor kinases.leucine rich repeat XIV' 'nbv0.5scaffold4018_189721-207768' '(at5g51350 : 874.0) Leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G61480.1); Has 108404 Blast hits to 45100 proteins in 1144 species: Archae - 34; Bacteria - 5225; Metazoa - 23563; Fungi - 1032; Plants - 70560; Viruses - 18; Other Eukaryotes - 7972 (source: NCBI BLink). & (p93194|rpk1_iponi : 317.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 149.0) no description available & (gnl|cdd|47549 : 83.3) no description available & (reliability: 1748.0) & (original description: Putative BnaC08g27040D, Description = BnaC08g27040D protein, PFAM = PF07714;PF13855;PF00560;PF00560)' T '30.2.14' 'signalling.receptor kinases.leucine rich repeat XIV' 'niben044scf00004388ctg037_425-3909' '(at3g24240 : 134.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT5G48940.1); Has 246558 Blast hits to 135557 proteins in 3810 species: Archae - 176; Bacteria - 24262; Metazoa - 71588; Fungi - 10499; Plants - 111580; Viruses - 361; Other Eukaryotes - 28092 (source: NCBI BLink). & (p93194|rpk1_iponi : 129.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 94.3) no description available & (reliability: 250.0) & (original description: Putative PGSC0003DMG400001016, Description = Non-specific serine/threonine protein kinase, PFAM = PF13855;PF13516)' T '30.2.14' 'signalling.receptor kinases.leucine rich repeat XIV' 'niben044scf00011442ctg002_553-5706' '(at5g51350 : 892.0) Leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G61480.1); Has 108404 Blast hits to 45100 proteins in 1144 species: Archae - 34; Bacteria - 5225; Metazoa - 23563; Fungi - 1032; Plants - 70560; Viruses - 18; Other Eukaryotes - 7972 (source: NCBI BLink). & (p93194|rpk1_iponi : 313.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 147.0) no description available & (gnl|cdd|47549 : 89.5) no description available & (reliability: 1784.0) & (original description: Putative BnaC08g27040D, Description = BnaC08g27040D protein, PFAM = PF08263;PF00560;PF07714)' T '30.2.14' 'signalling.receptor kinases.leucine rich repeat XIV' 'niben101scf00055_383109-391465' '(at2g16250 : 690.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT4G39270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 217.0) no description available & (q8lpb4|pskr_dauca : 191.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|88314 : 92.2) no description available & (reliability: 1380.0) & (original description: Putative PGSC0003DMG400015458, Description = Putative LRR receptor-like serine/threonine-protein kinase, PFAM = PF07714;PF13855;PF13855)' T '30.2.14' 'signalling.receptor kinases.leucine rich repeat XIV' 'niben101scf00091_58655-68072' '(at2g16250 : 733.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT4G39270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 223.0) no description available & (q8lpb4|pskr_dauca : 142.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|88314 : 96.4) no description available & (reliability: 1466.0) & (original description: Putative At2g16250, Description = Probable LRR receptor-like serine/threonine-protein kinase At2g16250, PFAM = PF07714;PF13855;PF13855)' T '30.2.14' 'signalling.receptor kinases.leucine rich repeat XIV' 'niben101scf07255_164842-173640' '(at2g16250 : 458.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT4G39270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 217.0) no description available & (q8lpb4|pskr_dauca : 130.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 92.6) no description available & (reliability: 916.0) & (original description: Putative At2g16250, Description = Probable LRR receptor-like serine/threonine-protein kinase At2g16250, PFAM = PF13855;PF13855;PF07714)' T '30.2.14' 'signalling.receptor kinases.leucine rich repeat XIV' 'niben101scf11936_35266-40306' '(at5g51350 : 896.0) Leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G61480.1); Has 108404 Blast hits to 45100 proteins in 1144 species: Archae - 34; Bacteria - 5225; Metazoa - 23563; Fungi - 1032; Plants - 70560; Viruses - 18; Other Eukaryotes - 7972 (source: NCBI BLink). & (p93194|rpk1_iponi : 315.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 149.0) no description available & (gnl|cdd|47549 : 83.3) no description available & (reliability: 1792.0) & (original description: Putative BnaC08g27040D, Description = BnaC08g27040D protein, PFAM = PF08263;PF13855;PF00560;PF00560;PF07714)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'nbv0.3scaffold3735_86221-90752' '(at5g38280 : 348.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 299.0) no description available & (p17801|kpro_maize : 190.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 171.0) no description available & (reliability: 696.0) & (original description: Putative glysoja_028070, Description = Putative receptor-like protein kinase, PFAM = PF13947;PF00069)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'nbv0.3scaffold4847_59137-63043' '(at1g66920 : 331.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1). & (gnl|cdd|36401 : 291.0) no description available & (p17801|kpro_maize : 198.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 165.0) no description available & (reliability: 626.0) & (original description: Putative drpk1, Description = Receptor-like kinase, PFAM = PF13947;PF00069)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'nbv0.3scaffold4847_63045-66534' '(at5g38280 : 348.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 300.0) no description available & (p17801|kpro_maize : 191.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 178.0) no description available & (reliability: 696.0) & (original description: Putative glysoja_028070, Description = Putative receptor-like protein kinase, PFAM = PF00069;PF13947)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'nbv0.3scaffold35280_9719-14656' '(at4g18250 : 362.0) receptor serine/threonine kinase, putative; FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, LP.02 two leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 120088 Blast hits to 117149 proteins in 4431 species: Archae - 164; Bacteria - 12523; Metazoa - 44044; Fungi - 10148; Plants - 35501; Viruses - 371; Other Eukaryotes - 17337 (source: NCBI BLink). & (gnl|cdd|36401 : 312.0) no description available & (p17801|kpro_maize : 197.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 164.0) no description available & (reliability: 724.0) & (original description: Putative Os04g0177000, Description = Os04g0177000 protein, PFAM = PF14380;PF00069)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'nbv0.3scaffold35280_9776-14713' '(at5g38260 : 363.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 311.0) no description available & (p17801|kpro_maize : 197.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 164.0) no description available & (reliability: 726.0) & (original description: Putative glysoja_021226, Description = Putative receptor-like protein kinase, PFAM = PF00069;PF14380)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'nbv0.5scaffold1066_241186-245814' '(at5g38280 : 330.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 290.0) no description available & (p17801|kpro_maize : 188.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 167.0) no description available & (reliability: 660.0) & (original description: Putative PGSC0003DMG400010701, Description = Stress-induced receptor-like kinase, PFAM = PF00069;PF13947)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'nbv0.5scaffold1380_130405-150040' '(at5g38260 : 342.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 274.0) no description available & (p17801|kpro_maize : 194.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 170.0) no description available & (reliability: 660.0) & (original description: Putative glysoja_028070, Description = Putative receptor-like protein kinase, PFAM = PF13947;PF00069)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'nbv0.5scaffold1631_131871-412560' '(at1g70250 : 312.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 214.0) no description available & (p17801|kpro_maize : 147.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 118.0) no description available & (reliability: 624.0) & (original description: Putative KK1_035972, Description = Putative receptor-like protein kinase At5g39020 family, PFAM = PF00069)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'nbv0.5scaffold3655_87658-91595' '(at5g38280 : 355.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 297.0) no description available & (p17801|kpro_maize : 192.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 169.0) no description available & (reliability: 710.0) & (original description: Putative PGSC0003DMG400010484, Description = Stress-induced receptor-like kinase, PFAM = PF00069)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'nbv0.5scaffold3655_155523-159639' '(at5g38280 : 347.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 300.0) no description available & (p17801|kpro_maize : 191.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 178.0) no description available & (reliability: 694.0) & (original description: Putative PGSC0003DMG400020899, Description = Stress-induced receptor-like kinase, PFAM = PF00069;PF13947)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'niben044scf00005266ctg002_1-4145' '(at5g38280 : 348.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 300.0) no description available & (p17801|kpro_maize : 191.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 177.0) no description available & (reliability: 696.0) & (original description: Putative glysoja_033594, Description = Putative receptor-like protein kinase, PFAM = PF13947;PF00069)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'niben044scf00005266ctg003_1-2204' '(at1g70250 : 281.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 248.0) no description available & (p17801|kpro_maize : 160.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 138.0) no description available & (reliability: 562.0) & (original description: Putative drpk1, Description = Receptor-like kinase, PFAM = PF00069)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'niben044scf00005266ctg007_7847-12072' '(at5g38280 : 351.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 298.0) no description available & (p17801|kpro_maize : 191.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 170.0) no description available & (reliability: 702.0) & (original description: Putative PGSC0003DMG400010484, Description = Stress-induced receptor-like kinase, PFAM = PF13947;PF00069)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'niben044scf00005963ctg017_1005-5633' '(at5g38280 : 330.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 290.0) no description available & (p17801|kpro_maize : 188.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 167.0) no description available & (reliability: 660.0) & (original description: Putative PGSC0003DMG400031485, Description = Stress-induced receptor-like kinase, PFAM = PF13947;PF00069)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'niben044scf00026280ctg006_1-2254' '(gnl|cdd|36401 : 288.0) no description available & (at5g38280 : 286.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p17801|kpro_maize : 170.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 170.0) no description available & (reliability: 572.0) & (original description: Putative glysoja_036704, Description = Putative receptor-like protein kinase, PFAM = PF00069)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'niben044scf00027232ctg000_1-1492' '(at1g70250 : 129.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 89.8) no description available & (reliability: 258.0) & (original description: Putative drpk1, Description = Receptor-like kinase, PFAM = PF00069)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'niben044scf00029680ctg004_2945-6016' '(at1g67000 : 318.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66930.1); Has 113853 Blast hits to 112150 proteins in 4512 species: Archae - 151; Bacteria - 11870; Metazoa - 43414; Fungi - 9147; Plants - 32426; Viruses - 293; Other Eukaryotes - 16552 (source: NCBI BLink). & (gnl|cdd|36401 : 288.0) no description available & (p17801|kpro_maize : 196.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 165.0) no description available & (reliability: 620.0) & (original description: Putative drpk1, Description = Receptor-like kinase, PFAM = PF00069)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'niben044scf00030827ctg001_6893-11996' '(at5g38260 : 361.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 291.0) no description available & (p17801|kpro_maize : 199.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 168.0) no description available & (reliability: 664.0) & (original description: Putative glysoja_028070, Description = Putative receptor-like protein kinase, PFAM = PF13947;PF00069;PF14380)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'niben044scf00055754ctg000_3233-6569' '(at1g70250 : 309.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 213.0) no description available & (p17801|kpro_maize : 145.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 116.0) no description available & (reliability: 618.0) & (original description: Putative KK1_035972, Description = Putative receptor-like protein kinase At5g39020 family, PFAM = PF00069)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'niben101ctg15354_819-3947' '(at5g38280 : 156.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 152.0) no description available & (p17801|kpro_maize : 116.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 101.0) no description available & (reliability: 312.0) & (original description: Putative PGSC0003DMG400010499, Description = PR5-like receptor kinase, PFAM = PF13947;PF07714)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'niben101scf00307_128035-131150' '(at1g70250 : 385.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 293.0) no description available & (p17801|kpro_maize : 197.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 166.0) no description available & (reliability: 770.0) & (original description: Putative Os04g0177000, Description = Os04g0177000 protein, PFAM = PF07714)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'niben101scf00530_1123866-1147086' '(at5g38260 : 348.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 275.0) no description available & (p17801|kpro_maize : 192.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 170.0) no description available & (reliability: 660.0) & (original description: Putative L484_014044, Description = Putative receptor-like protein kinase, PFAM = PF00069;PF13947)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'niben101scf00530_1136856-1142994' '(at5g38260 : 365.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 291.0) no description available & (p17801|kpro_maize : 194.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 168.0) no description available & (reliability: 662.0) & (original description: Putative glysoja_028070, Description = Putative receptor-like protein kinase, PFAM = PF00069;PF13947;PF14380)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'niben101scf01831_163236-166545' '(q9fsg7|tp1a_maldo : 259.0) Thaumatin-like protein 1a precursor (Allergen Mal d 2) (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|47535 : 241.0) no description available & (at4g38670 : 236.0) Pathogenesis-related thaumatin superfamily protein; INVOLVED IN: response to other organism; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT4G36010.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative TL1, Description = Thaumatin-like protein 1a, PFAM = PF00314)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'niben101scf01831_194436-197464' '(at2g17860 : 195.0) Pathogenesis-related thaumatin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT4G36010.2); Has 1602 Blast hits to 1583 proteins in 180 species: Archae - 0; Bacteria - 43; Metazoa - 56; Fungi - 78; Plants - 1409; Viruses - 4; Other Eukaryotes - 12 (source: NCBI BLink). & (q9fsg7|tp1a_maldo : 194.0) Thaumatin-like protein 1a precursor (Allergen Mal d 2) (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|47535 : 185.0) no description available & (reliability: 390.0) & (original description: Putative pr5, Description = Pathogenesis-related thaumatin family protein, PFAM = PF00314)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'niben101scf03363_229230-231818' '(gnl|cdd|36401 : 140.0) no description available & (at5g38280 : 119.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47549 : 105.0) no description available & (reliability: 238.0) & (original description: Putative PGSC0003DMG400004553, Description = Stress-induced receptor-like kinase, PFAM = PF07714)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'niben101scf04869_650988-655203' '(at5g38280 : 348.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 299.0) no description available & (p17801|kpro_maize : 190.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 171.0) no description available & (reliability: 696.0) & (original description: Putative PGSC0003DMG400031485, Description = Stress-induced receptor-like kinase, PFAM = PF13947;PF00069)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'niben101scf04943_232373-237340' '(at5g38260 : 363.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 312.0) no description available & (p17801|kpro_maize : 197.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 164.0) no description available & (reliability: 724.0) & (original description: Putative glysoja_021226, Description = Putative receptor-like protein kinase, PFAM = PF00069;PF14380)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'niben101scf05731_14519-116736' '(at1g70250 : 311.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 215.0) no description available & (p17801|kpro_maize : 147.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 119.0) no description available & (reliability: 622.0) & (original description: Putative glysoja_019068, Description = Putative receptor-like protein kinase, PFAM = PF00069)' T '30.2.15' 'signalling.receptor kinases.thaumatin like' 'niben101scf11071_269562-273711' '(at1g66910 : 382.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66930.1); Has 113951 Blast hits to 112305 proteins in 4393 species: Archae - 178; Bacteria - 12361; Metazoa - 42729; Fungi - 9627; Plants - 32494; Viruses - 324; Other Eukaryotes - 16238 (source: NCBI BLink). & (gnl|cdd|36401 : 298.0) no description available & (p17801|kpro_maize : 181.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 169.0) no description available & (reliability: 738.0) & (original description: Putative Sb03g006765, Description = Putative uncharacterized protein Sb03g006765, PFAM = PF14380;PF00069)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'nbv0.3scaffold352_126087-131728' '(gnl|cdd|36401 : 167.0) no description available & (at1g24030 : 117.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 120365 Blast hits to 119013 proteins in 4490 species: Archae - 114; Bacteria - 14164; Metazoa - 43937; Fungi - 10244; Plants - 33641; Viruses - 447; Other Eukaryotes - 17818 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 103.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 86.0) no description available & (reliability: 216.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF07714;PF00069)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'nbv0.3scaffold4847_59137-63043' '(at1g66920 : 331.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1). & (gnl|cdd|36401 : 291.0) no description available & (p17801|kpro_maize : 198.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 165.0) no description available & (reliability: 610.0) & (original description: Putative drpk1, Description = Receptor-like kinase, PFAM = PF13947;PF00069)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'nbv0.3scaffold4847_63045-66534' '(at5g38280 : 348.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 300.0) no description available & (p17801|kpro_maize : 191.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 178.0) no description available & (reliability: 628.0) & (original description: Putative glysoja_028070, Description = Putative receptor-like protein kinase, PFAM = PF00069;PF13947)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'nbv0.3scaffold35280_9719-14656' '(at4g18250 : 362.0) receptor serine/threonine kinase, putative; FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, LP.02 two leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 120088 Blast hits to 117149 proteins in 4431 species: Archae - 164; Bacteria - 12523; Metazoa - 44044; Fungi - 10148; Plants - 35501; Viruses - 371; Other Eukaryotes - 17337 (source: NCBI BLink). & (gnl|cdd|36401 : 312.0) no description available & (p17801|kpro_maize : 197.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 164.0) no description available & (reliability: 710.0) & (original description: Putative Os04g0177000, Description = Os04g0177000 protein, PFAM = PF14380;PF00069)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'nbv0.3scaffold35280_9776-14713' '(at5g38260 : 363.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 311.0) no description available & (p17801|kpro_maize : 197.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 164.0) no description available & (reliability: 708.0) & (original description: Putative glysoja_021226, Description = Putative receptor-like protein kinase, PFAM = PF00069;PF14380)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'nbv0.5scaffold1154_174629-179142' '(at3g46290 : 1025.0) Encodes HERCULES1 (HERK1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth.; hercules receptor kinase 1 (HERK1); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: brassinosteroid mediated signaling pathway, post-embryonic development, response to brassinosteroid stimulus, unidimensional cell growth, regulation of unidimensional cell growth; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G59700.1); Has 116300 Blast hits to 115060 proteins in 4658 species: Archae - 101; Bacteria - 13233; Metazoa - 43205; Fungi - 9848; Plants - 32844; Viruses - 378; Other Eukaryotes - 16691 (source: NCBI BLink). & (gnl|cdd|36401 : 382.0) no description available & (q8l4h4|nork_medtr : 265.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 173.0) no description available & (reliability: 2050.0) & (original description: Putative At5g59700, Description = Probable receptor-like protein kinase At5g59700, PFAM = PF12819;PF07714)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'nbv0.5scaffold1380_130405-150040' '(at5g38260 : 342.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 274.0) no description available & (p17801|kpro_maize : 194.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 170.0) no description available & (reliability: 620.0) & (original description: Putative glysoja_028070, Description = Putative receptor-like protein kinase, PFAM = PF13947;PF00069)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'nbv0.5scaffold1631_131871-412560' '(at1g70250 : 312.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 214.0) no description available & (p17801|kpro_maize : 147.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 118.0) no description available & (reliability: 608.0) & (original description: Putative KK1_035972, Description = Putative receptor-like protein kinase At5g39020 family, PFAM = PF00069)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'nbv0.5scaffold2350_313875-318518' '(at5g24010 : 581.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: hercules receptor kinase 1 (TAIR:AT3G46290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 357.0) no description available & (q8l4h4|nork_medtr : 258.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 168.0) no description available & (reliability: 1162.0) & (original description: Putative At2g23200, Description = Probable receptor-like protein kinase At2g23200, PFAM = PF12819;PF07714)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'nbv0.5scaffold3655_155523-159639' '(at5g38280 : 347.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 300.0) no description available & (p17801|kpro_maize : 191.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 178.0) no description available & (reliability: 628.0) & (original description: Putative PGSC0003DMG400020899, Description = Stress-induced receptor-like kinase, PFAM = PF00069;PF13947)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'nbv0.5scaffold4949_113415-118009' '(at1g30570 : 1003.0) Encodes HERCULES2 (HERK2), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth.; hercules receptor kinase 2 (HERK2); FUNCTIONS IN: kinase activity; INVOLVED IN: response to brassinosteroid stimulus, unidimensional cell growth; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase family protein (TAIR:AT5G54380.1); Has 114546 Blast hits to 113143 proteins in 4406 species: Archae - 97; Bacteria - 12871; Metazoa - 42415; Fungi - 9727; Plants - 32943; Viruses - 349; Other Eukaryotes - 16144 (source: NCBI BLink). & (gnl|cdd|36401 : 375.0) no description available & (q8l4h4|nork_medtr : 244.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 176.0) no description available & (reliability: 2006.0) & (original description: Putative At1g30570, Description = Probable receptor-like protein kinase At1g30570, PFAM = PF12819;PF07714)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'nbv0.5scaffold8452_23422-27442' '(at5g54380 : 1167.0) Encodes THESEUS1 (THE1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth.; THESEUS1 (THE1); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: hercules receptor kinase 1 (TAIR:AT3G46290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 400.0) no description available & (q8l4h4|nork_medtr : 270.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 173.0) no description available & (reliability: 2334.0) & (original description: Putative THE1, Description = Receptor-like protein kinase THESEUS 1, PFAM = PF12819;PF07714)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'nbv0.5scaffold10200_497-3643' '(at3g46290 : 540.0) Encodes HERCULES1 (HERK1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth.; hercules receptor kinase 1 (HERK1); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: brassinosteroid mediated signaling pathway, post-embryonic development, response to brassinosteroid stimulus, unidimensional cell growth, regulation of unidimensional cell growth; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G59700.1); Has 116300 Blast hits to 115060 proteins in 4658 species: Archae - 101; Bacteria - 13233; Metazoa - 43205; Fungi - 9848; Plants - 32844; Viruses - 378; Other Eukaryotes - 16691 (source: NCBI BLink). & (gnl|cdd|36401 : 374.0) no description available & (q8l4h4|nork_medtr : 250.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|88314 : 173.0) no description available & (reliability: 1080.0) & (original description: Putative pto, Description = Pto kinase, PFAM = PF07714)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben044scf00002317ctg018_899-5828' '(at1g30570 : 983.0) Encodes HERCULES2 (HERK2), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth.; hercules receptor kinase 2 (HERK2); FUNCTIONS IN: kinase activity; INVOLVED IN: response to brassinosteroid stimulus, unidimensional cell growth; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase family protein (TAIR:AT5G54380.1); Has 114546 Blast hits to 113143 proteins in 4406 species: Archae - 97; Bacteria - 12871; Metazoa - 42415; Fungi - 9727; Plants - 32943; Viruses - 349; Other Eukaryotes - 16144 (source: NCBI BLink). & (gnl|cdd|36401 : 376.0) no description available & (q8l4h4|nork_medtr : 244.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 177.0) no description available & (reliability: 1966.0) & (original description: Putative At1g30570, Description = Probable receptor-like protein kinase At1g30570, PFAM = PF12819;PF07714)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben044scf00003068ctg005_3278-7876' '(at5g54380 : 1168.0) Encodes THESEUS1 (THE1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth.; THESEUS1 (THE1); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: hercules receptor kinase 1 (TAIR:AT3G46290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 400.0) no description available & (q8l4h4|nork_medtr : 271.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 175.0) no description available & (reliability: 2336.0) & (original description: Putative THE1, Description = Receptor-like protein kinase THESEUS 1, PFAM = PF12819;PF07714)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben044scf00005266ctg002_1-4145' '(at5g38280 : 348.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 300.0) no description available & (p17801|kpro_maize : 191.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 177.0) no description available & (reliability: 628.0) & (original description: Putative glysoja_033594, Description = Putative receptor-like protein kinase, PFAM = PF13947;PF00069)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben044scf00005266ctg003_1-2204' '(at1g70250 : 281.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 248.0) no description available & (p17801|kpro_maize : 160.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 138.0) no description available & (reliability: 530.0) & (original description: Putative drpk1, Description = Receptor-like kinase, PFAM = PF00069)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben044scf00005698ctg028_1888-7707' '(gnl|cdd|36401 : 167.0) no description available & (at1g24030 : 117.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 120365 Blast hits to 119013 proteins in 4490 species: Archae - 114; Bacteria - 14164; Metazoa - 43937; Fungi - 10244; Plants - 33641; Viruses - 447; Other Eukaryotes - 17818 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 105.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47550 : 87.6) no description available & (reliability: 216.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF07714;PF00069)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben044scf00008166ctg002_1-2174' '(at5g39030 : 249.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Malectin/receptor-like protein kinase family protein (TAIR:AT5G39020.1); Has 115892 Blast hits to 114373 proteins in 4327 species: Archae - 137; Bacteria - 12603; Metazoa - 43642; Fungi - 9860; Plants - 32580; Viruses - 298; Other Eukaryotes - 16772 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative AAK1, Description = Receptor-like protein kinase FERONIA, PFAM = PF12819)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben044scf00008803ctg003_10328-13496' '(at3g46290 : 479.0) Encodes HERCULES1 (HERK1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth.; hercules receptor kinase 1 (HERK1); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: brassinosteroid mediated signaling pathway, post-embryonic development, response to brassinosteroid stimulus, unidimensional cell growth, regulation of unidimensional cell growth; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G59700.1); Has 116300 Blast hits to 115060 proteins in 4658 species: Archae - 101; Bacteria - 13233; Metazoa - 43205; Fungi - 9848; Plants - 32844; Viruses - 378; Other Eukaryotes - 16691 (source: NCBI BLink). & (gnl|cdd|36401 : 351.0) no description available & (q8l4h4|nork_medtr : 247.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 173.0) no description available & (reliability: 958.0) & (original description: Putative fen, Description = Receptor-like protein kinase HERK 1, PFAM = PF07714)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben044scf00027232ctg000_1-1492' '(at1g70250 : 129.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 89.8) no description available & (reliability: 246.0) & (original description: Putative drpk1, Description = Receptor-like kinase, PFAM = PF00069)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben044scf00029680ctg004_2945-6016' '(at1g67000 : 318.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66930.1); Has 113853 Blast hits to 112150 proteins in 4512 species: Archae - 151; Bacteria - 11870; Metazoa - 43414; Fungi - 9147; Plants - 32426; Viruses - 293; Other Eukaryotes - 16552 (source: NCBI BLink). & (gnl|cdd|36401 : 288.0) no description available & (p17801|kpro_maize : 196.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 165.0) no description available & (reliability: 602.0) & (original description: Putative drpk1, Description = Receptor-like kinase, PFAM = PF00069)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben044scf00055094ctg003_1-2447' '(gnl|cdd|36401 : 195.0) no description available & (at1g79620 : 134.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G49760.1); Has 173131 Blast hits to 132948 proteins in 4769 species: Archae - 163; Bacteria - 18653; Metazoa - 51943; Fungi - 10632; Plants - 70309; Viruses - 438; Other Eukaryotes - 20993 (source: NCBI BLink). & (q8l4h4|nork_medtr : 117.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 109.0) no description available & (reliability: 268.0) & (original description: Putative At3g26700, Description = Putative leucine-rich repeat receptor-like protein kinase, PFAM = PF07714)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben044scf00055754ctg000_3233-6569' '(at1g70250 : 309.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 213.0) no description available & (p17801|kpro_maize : 145.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 116.0) no description available & (reliability: 606.0) & (original description: Putative KK1_035972, Description = Putative receptor-like protein kinase At5g39020 family, PFAM = PF00069)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben101scf00063_515494-534696' '(at5g61350 : 987.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, flower, cultured cell; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Malectin/receptor-like protein kinase family protein (TAIR:AT4G39110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 389.0) no description available & (q8lkz1|nork_pea : 276.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 176.0) no description available & (reliability: 1974.0) & (original description: Putative At5g61350, Description = Probable receptor-like protein kinase At5g61350, PFAM = PF02190;PF07714;PF13923;PF12819)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben101scf00177_911277-919523' '(gnl|cdd|36401 : 267.0) no description available & (at5g40380 : 194.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (CRK42); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (TAIR:AT1G70530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29142 : 172.0) no description available & (o24585|cri4_maize : 158.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 366.0) & (original description: Putative Sb08g000610, Description = Putative uncharacterized protein Sb08g000610, PFAM = PF00069)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben101scf00307_128035-131150' '(at1g70250 : 385.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 293.0) no description available & (p17801|kpro_maize : 197.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 166.0) no description available & (reliability: 756.0) & (original description: Putative Os04g0177000, Description = Os04g0177000 protein, PFAM = PF07714)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben101scf00687_833399-838032' '(at3g04690 : 795.0) Receptor-like kinase required for maintenance of pollen tube growth. Display polar localization at the plasma membrane of the pollen tube tip.; ANXUR1 (ANX1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: pollen tube growth; LOCATED IN: apical plasma membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Malectin/receptor-like protein kinase family protein (TAIR:AT5G28680.1); Has 116261 Blast hits to 114696 proteins in 4495 species: Archae - 97; Bacteria - 13075; Metazoa - 43488; Fungi - 9623; Plants - 32771; Viruses - 440; Other Eukaryotes - 16767 (source: NCBI BLink). & (gnl|cdd|36401 : 382.0) no description available & (q8lkz1|nork_pea : 229.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 176.0) no description available & (reliability: 1590.0) & (original description: Putative AAK1, Description = Receptor-like protein kinase FERONIA, PFAM = PF07714;PF12819)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben101scf01934_509901-514583' '(at3g04690 : 953.0) Receptor-like kinase required for maintenance of pollen tube growth. Display polar localization at the plasma membrane of the pollen tube tip.; ANXUR1 (ANX1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: pollen tube growth; LOCATED IN: apical plasma membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Malectin/receptor-like protein kinase family protein (TAIR:AT5G28680.1); Has 116261 Blast hits to 114696 proteins in 4495 species: Archae - 97; Bacteria - 13075; Metazoa - 43488; Fungi - 9623; Plants - 32771; Viruses - 440; Other Eukaryotes - 16767 (source: NCBI BLink). & (gnl|cdd|36401 : 379.0) no description available & (q8l4h4|nork_medtr : 267.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 178.0) no description available & (reliability: 1906.0) & (original description: Putative ANX1, Description = Receptor-like protein kinase ANXUR1, PFAM = PF12819;PF07714)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben101scf01984_11145-74750' '(at3g46290 : 484.0) Encodes HERCULES1 (HERK1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth.; hercules receptor kinase 1 (HERK1); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: brassinosteroid mediated signaling pathway, post-embryonic development, response to brassinosteroid stimulus, unidimensional cell growth, regulation of unidimensional cell growth; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G59700.1); Has 116300 Blast hits to 115060 proteins in 4658 species: Archae - 101; Bacteria - 13233; Metazoa - 43205; Fungi - 9848; Plants - 32844; Viruses - 378; Other Eukaryotes - 16691 (source: NCBI BLink). & (gnl|cdd|36401 : 353.0) no description available & (q8l4h4|nork_medtr : 247.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 173.0) no description available & (reliability: 968.0) & (original description: Putative pto, Description = Pto kinase, PFAM = PF07714)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben101scf02290_196298-200378' '(at1g66920 : 321.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1). & (gnl|cdd|36401 : 289.0) no description available & (p17801|kpro_maize : 166.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 163.0) no description available & (reliability: 584.0) & (original description: Putative RKO_3, Description = Ser/Thr receptor-like kinase, putative, expressed, PFAM = PF00069;PF13947)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben101scf02449_260701-265417' '(at3g46290 : 1009.0) Encodes HERCULES1 (HERK1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth.; hercules receptor kinase 1 (HERK1); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: brassinosteroid mediated signaling pathway, post-embryonic development, response to brassinosteroid stimulus, unidimensional cell growth, regulation of unidimensional cell growth; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G59700.1); Has 116300 Blast hits to 115060 proteins in 4658 species: Archae - 101; Bacteria - 13233; Metazoa - 43205; Fungi - 9848; Plants - 32844; Viruses - 378; Other Eukaryotes - 16691 (source: NCBI BLink). & (gnl|cdd|36401 : 382.0) no description available & (q8l4h4|nork_medtr : 263.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 173.0) no description available & (reliability: 2018.0) & (original description: Putative HERK1, Description = Receptor-like protein kinase HERK 1, PFAM = PF07714;PF12819)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben101scf02639_385981-390224' '(at3g46290 : 764.0) Encodes HERCULES1 (HERK1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth.; hercules receptor kinase 1 (HERK1); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: brassinosteroid mediated signaling pathway, post-embryonic development, response to brassinosteroid stimulus, unidimensional cell growth, regulation of unidimensional cell growth; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G59700.1); Has 116300 Blast hits to 115060 proteins in 4658 species: Archae - 101; Bacteria - 13233; Metazoa - 43205; Fungi - 9848; Plants - 32844; Viruses - 378; Other Eukaryotes - 16691 (source: NCBI BLink). & (gnl|cdd|36401 : 387.0) no description available & (q8l4h4|nork_medtr : 244.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 176.0) no description available & (reliability: 1528.0) & (original description: Putative HERK1, Description = Receptor-like protein kinase HERK 1, PFAM = PF07714;PF12819)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben101scf02712_13352-17862' '(at5g54380 : 1078.0) Encodes THESEUS1 (THE1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth.; THESEUS1 (THE1); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: hercules receptor kinase 1 (TAIR:AT3G46290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 378.0) no description available & (q8l4h4|nork_medtr : 252.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 174.0) no description available & (reliability: 2156.0) & (original description: Putative THE1, Description = Receptor-like protein kinase THESEUS 1, PFAM = PF12819;PF07714)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben101scf03407_213541-218054' '(at5g54380 : 1051.0) Encodes THESEUS1 (THE1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth.; THESEUS1 (THE1); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: hercules receptor kinase 1 (TAIR:AT3G46290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 389.0) no description available & (q8l4h4|nork_medtr : 258.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 174.0) no description available & (reliability: 2102.0) & (original description: Putative THE1, Description = Receptor-like protein kinase THESEUS 1, PFAM = PF12819;PF07714)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben101scf03534_51831-55923' '(gnl|cdd|36401 : 273.0) no description available & (at4g02010 : 199.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G20300.1); Has 117558 Blast hits to 116281 proteins in 4412 species: Archae - 107; Bacteria - 13740; Metazoa - 43399; Fungi - 9953; Plants - 33036; Viruses - 373; Other Eukaryotes - 16950 (source: NCBI BLink). & (q8l4h4|nork_medtr : 191.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47550 : 155.0) no description available & (reliability: 396.0) & (original description: Putative pto, Description = Putative receptor-like protein kinase, PFAM = PF00069)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben101scf03905_171187-175748' '(at3g04690 : 940.0) Receptor-like kinase required for maintenance of pollen tube growth. Display polar localization at the plasma membrane of the pollen tube tip.; ANXUR1 (ANX1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: pollen tube growth; LOCATED IN: apical plasma membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Malectin/receptor-like protein kinase family protein (TAIR:AT5G28680.1); Has 116261 Blast hits to 114696 proteins in 4495 species: Archae - 97; Bacteria - 13075; Metazoa - 43488; Fungi - 9623; Plants - 32771; Viruses - 440; Other Eukaryotes - 16767 (source: NCBI BLink). & (gnl|cdd|36401 : 382.0) no description available & (q8l4h4|nork_medtr : 264.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|88314 : 180.0) no description available & (reliability: 1880.0) & (original description: Putative ANX1, Description = Receptor-like protein kinase ANXUR1, PFAM = PF07714;PF12819)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben101scf03939_44922-49411' '(at3g46290 : 992.0) Encodes HERCULES1 (HERK1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth.; hercules receptor kinase 1 (HERK1); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: brassinosteroid mediated signaling pathway, post-embryonic development, response to brassinosteroid stimulus, unidimensional cell growth, regulation of unidimensional cell growth; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G59700.1); Has 116300 Blast hits to 115060 proteins in 4658 species: Archae - 101; Bacteria - 13233; Metazoa - 43205; Fungi - 9848; Plants - 32844; Viruses - 378; Other Eukaryotes - 16691 (source: NCBI BLink). & (gnl|cdd|36401 : 372.0) no description available & (q8l4h4|nork_medtr : 240.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 174.0) no description available & (reliability: 1984.0) & (original description: Putative HERK1, Description = Receptor-like protein kinase HERK 1, PFAM = PF07714;PF12819)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben101scf04123_264058-268721' '(at3g51550 : 1235.0) Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception.; FERONIA (FER); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: pollen tube reception, post-embryonic development, protein amino acid autophosphorylation; LOCATED IN: filiform apparatus, plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Malectin/receptor-like protein kinase family protein (TAIR:AT3G04690.1); Has 113642 Blast hits to 112400 proteins in 4384 species: Archae - 101; Bacteria - 12955; Metazoa - 42231; Fungi - 9220; Plants - 32542; Viruses - 402; Other Eukaryotes - 16191 (source: NCBI BLink). & (gnl|cdd|36401 : 390.0) no description available & (q8l4h4|nork_medtr : 261.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|88314 : 174.0) no description available & (reliability: 2470.0) & (original description: Putative BnaC02g39350D, Description = BnaC02g39350D protein, PFAM = PF12819;PF07714)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben101scf04861_28487-33132' '(at4g39110 : 1006.0) Malectin/receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Malectin/receptor-like protein kinase family protein (TAIR:AT2G21480.1); Has 114802 Blast hits to 113634 proteins in 4321 species: Archae - 99; Bacteria - 12985; Metazoa - 42549; Fungi - 9629; Plants - 32923; Viruses - 364; Other Eukaryotes - 16253 (source: NCBI BLink). & (gnl|cdd|36401 : 389.0) no description available & (q8l4h4|nork_medtr : 259.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 169.0) no description available & (reliability: 2012.0) & (original description: Putative At4g39110, Description = Probable receptor-like protein kinase At4g39110, PFAM = PF07714;PF12819)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben101scf04943_232373-237340' '(at5g38260 : 363.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 312.0) no description available & (p17801|kpro_maize : 197.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 164.0) no description available & (reliability: 706.0) & (original description: Putative glysoja_021226, Description = Putative receptor-like protein kinase, PFAM = PF00069;PF14380)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben101scf05300_185401-189962' '(at4g39110 : 1000.0) Malectin/receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Malectin/receptor-like protein kinase family protein (TAIR:AT2G21480.1); Has 114802 Blast hits to 113634 proteins in 4321 species: Archae - 99; Bacteria - 12985; Metazoa - 42549; Fungi - 9629; Plants - 32923; Viruses - 364; Other Eukaryotes - 16253 (source: NCBI BLink). & (gnl|cdd|36401 : 397.0) no description available & (q8l4h4|nork_medtr : 270.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 171.0) no description available & (reliability: 2000.0) & (original description: Putative Os06g0126250, Description = Os06g0126250 protein, PFAM = PF12819;PF07714)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben101scf05731_14519-116736' '(at1g70250 : 311.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 215.0) no description available & (p17801|kpro_maize : 147.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 119.0) no description available & (reliability: 606.0) & (original description: Putative glysoja_019068, Description = Putative receptor-like protein kinase, PFAM = PF00069)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben101scf07619_25958-30621' '(at3g51550 : 1234.0) Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception.; FERONIA (FER); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: pollen tube reception, post-embryonic development, protein amino acid autophosphorylation; LOCATED IN: filiform apparatus, plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Malectin/receptor-like protein kinase family protein (TAIR:AT3G04690.1); Has 113642 Blast hits to 112400 proteins in 4384 species: Archae - 101; Bacteria - 12955; Metazoa - 42231; Fungi - 9220; Plants - 32542; Viruses - 402; Other Eukaryotes - 16191 (source: NCBI BLink). & (gnl|cdd|36401 : 391.0) no description available & (q8l4h4|nork_medtr : 259.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|88314 : 175.0) no description available & (reliability: 2468.0) & (original description: Putative FER, Description = Receptor-like protein kinase FERONIA, PFAM = PF12819;PF07714)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben101scf08500_152954-157528' '(at5g24010 : 936.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: hercules receptor kinase 1 (TAIR:AT3G46290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 382.0) no description available & (q8l4h4|nork_medtr : 244.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 171.0) no description available & (reliability: 1872.0) & (original description: Putative At5g24010, Description = Probable receptor-like protein kinase At5g24010, PFAM = PF07714;PF12819)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben101scf10015_549057-553612' '(at5g54380 : 762.0) Encodes THESEUS1 (THE1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth.; THESEUS1 (THE1); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: hercules receptor kinase 1 (TAIR:AT3G46290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 380.0) no description available & (q8l4h4|nork_medtr : 242.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 168.0) no description available & (reliability: 1524.0) & (original description: Putative At5g61350, Description = Probable receptor-like protein kinase At5g61350, PFAM = PF07714;PF12819)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben101scf10015_1108706-1113144' '(at3g46290 : 754.0) Encodes HERCULES1 (HERK1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth.; hercules receptor kinase 1 (HERK1); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: brassinosteroid mediated signaling pathway, post-embryonic development, response to brassinosteroid stimulus, unidimensional cell growth, regulation of unidimensional cell growth; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G59700.1); Has 116300 Blast hits to 115060 proteins in 4658 species: Archae - 101; Bacteria - 13233; Metazoa - 43205; Fungi - 9848; Plants - 32844; Viruses - 378; Other Eukaryotes - 16691 (source: NCBI BLink). & (gnl|cdd|36401 : 380.0) no description available & (q8l4h4|nork_medtr : 232.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 177.0) no description available & (reliability: 1508.0) & (original description: Putative HERK1, Description = Receptor-like protein kinase HERK 1, PFAM = PF07714;PF12819)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben101scf11071_269562-273711' '(at1g66910 : 382.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66930.1); Has 113951 Blast hits to 112305 proteins in 4393 species: Archae - 178; Bacteria - 12361; Metazoa - 42729; Fungi - 9627; Plants - 32494; Viruses - 324; Other Eukaryotes - 16238 (source: NCBI BLink). & (gnl|cdd|36401 : 298.0) no description available & (p17801|kpro_maize : 181.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 169.0) no description available & (reliability: 688.0) & (original description: Putative Sb03g006765, Description = Putative uncharacterized protein Sb03g006765, PFAM = PF14380;PF00069)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben101scf11560_20679-24959' '(gnl|cdd|36401 : 335.0) no description available & (at5g54380 : 253.0) Encodes THESEUS1 (THE1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth.; THESEUS1 (THE1); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: hercules receptor kinase 1 (TAIR:AT3G46290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8l4h4|nork_medtr : 232.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 154.0) no description available & (reliability: 506.0) & (original description: Putative ANX1, Description = Receptor-like protein kinase THESEUS 1, PFAM = PF00069)' T '30.2.16' 'signalling.receptor kinases.Catharanthus roseus-like RLK1' 'niben101scf25768_8394-13226' '(at3g51550 : 743.0) Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception.; FERONIA (FER); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: pollen tube reception, post-embryonic development, protein amino acid autophosphorylation; LOCATED IN: filiform apparatus, plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Malectin/receptor-like protein kinase family protein (TAIR:AT3G04690.1); Has 113642 Blast hits to 112400 proteins in 4384 species: Archae - 101; Bacteria - 12955; Metazoa - 42231; Fungi - 9220; Plants - 32542; Viruses - 402; Other Eukaryotes - 16191 (source: NCBI BLink). & (gnl|cdd|36401 : 386.0) no description available & (q8l4h4|nork_medtr : 254.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 175.0) no description available & (reliability: 1486.0) & (original description: Putative At5g39000, Description = Putative receptor-like protein kinase At5g39000, PFAM = PF12819;PF07714)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'nbv0.3scaffold352_126087-131728' '(gnl|cdd|36401 : 167.0) no description available & (at1g24030 : 117.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 120365 Blast hits to 119013 proteins in 4490 species: Archae - 114; Bacteria - 14164; Metazoa - 43937; Fungi - 10244; Plants - 33641; Viruses - 447; Other Eukaryotes - 17818 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 103.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 86.0) no description available & (reliability: 220.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF07714;PF00069)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'nbv0.3scaffold21492_24309-31730' '(gnl|cdd|36401 : 145.0) no description available & (at1g11050 : 116.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor-like kinase in in flowers 3 (TAIR:AT2G48010.1); Has 115297 Blast hits to 114175 proteins in 4324 species: Archae - 104; Bacteria - 13350; Metazoa - 42303; Fungi - 9816; Plants - 32853; Viruses - 335; Other Eukaryotes - 16536 (source: NCBI BLink). & (gnl|cdd|29142 : 107.0) no description available & (o24585|cri4_maize : 89.7) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 226.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF00069)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'nbv0.3scaffold26763_14390-20562' '(at3g16030 : 220.0) CALLUS EXPRESSION OF RBCS 101 (CES101); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT4G21390.1); Has 121576 Blast hits to 119500 proteins in 4422 species: Archae - 101; Bacteria - 13477; Metazoa - 44302; Fungi - 10440; Plants - 35232; Viruses - 450; Other Eukaryotes - 17574 (source: NCBI BLink). & (gnl|cdd|36401 : 189.0) no description available & (p07761|slsg6_braol : 137.0) S-locus-specific glycoprotein S6 precursor (SLSG-6) - Brassica oleracea (Wild cabbage) & (gnl|cdd|47549 : 109.0) no description available & (reliability: 402.0) & (original description: Putative At1g67520, Description = Serine/threonine-protein kinase PBS1, putative, PFAM = PF08276;PF07714;PF01453)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'nbv0.3scaffold28537_12653-15222' '(at4g27300 : 151.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT4G27290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 92.9) no description available & (reliability: 282.0) & (original description: Putative SRK, Description = Serine/threonine-protein kinase, PFAM = PF07714)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'nbv0.3scaffold56814_4251-12873' '(at3g16030 : 356.0) CALLUS EXPRESSION OF RBCS 101 (CES101); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT4G21390.1); Has 121576 Blast hits to 119500 proteins in 4422 species: Archae - 101; Bacteria - 13477; Metazoa - 44302; Fungi - 10440; Plants - 35232; Viruses - 450; Other Eukaryotes - 17574 (source: NCBI BLink). & (gnl|cdd|36401 : 314.0) no description available & (gnl|cdd|47913 : 231.0) no description available & (q8l4h4|nork_medtr : 207.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 700.0) & (original description: Putative Chrk1, Description = Receptor-like kinase CHRK1, PFAM = PF00704;PF07714)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'nbv0.3scaffold59476_1-2490' '(at4g23160 : 114.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative rTeg1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'nbv0.3scaffold61887_4160-7559' '(at4g23160 : 249.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (p10978|polx_tobac : 157.0) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco) & (reliability: 498.0) & (original description: Putative rTeg1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'nbv0.3scaffold71341_426-8261' '(at4g23180 : 115.0) Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307); cysteine-rich RLK (RECEPTOR-like protein kinase) 10 (CRK10); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (TAIR:AT4G23160.1); Has 124145 Blast hits to 122467 proteins in 4564 species: Archae - 110; Bacteria - 14159; Metazoa - 45299; Fungi - 10862; Plants - 34986; Viruses - 473; Other Eukaryotes - 18256 (source: NCBI BLink). & (gnl|cdd|36401 : 91.3) no description available & (reliability: 230.0) & (original description: Putative SRK, Description = Serine/threonine-protein kinase, PFAM = PF07714)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'nbv0.3scaffold79770_1004-3465' '(at4g23160 : 128.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (gnl|cdd|87352 : 99.0) no description available & (p10978|polx_tobac : 89.0) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco) & (reliability: 256.0) & (original description: Putative rTeg1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF07727)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'nbv0.3scaffold90233_1-1781' '(p10978|polx_tobac : 106.0) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco) & (at4g23160 : 87.4) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative pol, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'nbv0.3scaffold118398_1-2285' '(p10978|polx_tobac : 393.0) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco) & (gnl|cdd|87352 : 228.0) no description available & (at4g23160 : 213.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative POLX, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF07727)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'nbv0.3scaffold129392_336-1684' '(gnl|cdd|87352 : 152.0) no description available & (at4g23160 : 112.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (p10978|polx_tobac : 95.5) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco) & (reliability: 224.0) & (original description: Putative rTeg1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF07727)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'nbv0.3scaffold140550_1-1296' '(gnl|cdd|87352 : 143.0) no description available & (p10978|polx_tobac : 98.6) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco) & (at4g23160 : 90.5) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative RT, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF07727)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'nbv0.5scaffold58_1019755-1024876' '(at4g23160 : 126.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (gnl|cdd|87352 : 120.0) no description available & (reliability: 252.0) & (original description: Putative rTeg1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF07727)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'nbv0.5scaffold220_688851-691436' '(at4g23160 : 114.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (gnl|cdd|87352 : 105.0) no description available & (reliability: 228.0) & (original description: Putative rTeg1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF07727)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'nbv0.5scaffold1040_193439-203946' '(at5g40380 : 536.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (CRK42); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (TAIR:AT1G70530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 278.0) no description available & (q8lpb4|pskr_dauca : 185.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 163.0) no description available & (reliability: 1072.0) & (original description: Putative CRK1, Description = Cysteine-rich receptor-like protein kinase 42, PFAM = PF00069;PF01657)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'nbv0.5scaffold1357_358279-360971' '(gnl|cdd|87352 : 126.0) no description available & (at4g23160 : 89.7) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative gag, Description = Retrotransposon protein, putative, Ty1-copia subclass, PFAM = PF07727)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'nbv0.5scaffold1606_80039-82620' '(p10978|polx_tobac : 146.0) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco) & (at4g23160 : 140.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (gnl|cdd|87352 : 101.0) no description available & (reliability: 280.0) & (original description: Putative rTeg1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF07727)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'nbv0.5scaffold1606_80186-82782' '(p10978|polx_tobac : 156.0) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco) & (at4g23160 : 155.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative RF12, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'nbv0.5scaffold1949_233585-300586' '(at4g27290 : 128.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor kinase 3 (TAIR:AT4G21380.1); Has 125077 Blast hits to 123040 proteins in 4681 species: Archae - 101; Bacteria - 14188; Metazoa - 45583; Fungi - 10059; Plants - 36201; Viruses - 449; Other Eukaryotes - 18496 (source: NCBI BLink). & (gnl|cdd|36401 : 91.3) no description available & (reliability: 242.0) & (original description: Putative SRK, Description = Serine/threonine-protein kinase, PFAM = PF07714)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'nbv0.5scaffold1957_154100-156774' '(gnl|cdd|87352 : 162.0) no description available & (at4g23160 : 122.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (p10978|polx_tobac : 119.0) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco) & (reliability: 244.0) & (original description: Putative rTeg1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF07727)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'nbv0.5scaffold2007_272192-274817' '(at4g23160 : 114.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (p10978|polx_tobac : 84.0) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco) & (reliability: 228.0) & (original description: Putative rTeg1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'nbv0.5scaffold3262_196643-199055' '(gnl|cdd|87352 : 118.0) no description available & (at4g23160 : 105.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative rTeg1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF07727)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'nbv0.5scaffold4690_148616-151371' '(at4g23160 : 228.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (p10978|polx_tobac : 154.0) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco) & (gnl|cdd|87352 : 114.0) no description available & (reliability: 456.0) & (original description: Putative rTeg1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF07727)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'nbv0.5scaffold7362_68261-70692' '(gnl|cdd|87352 : 125.0) no description available & (at4g23160 : 92.4) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (p10978|polx_tobac : 82.8) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco) & (reliability: 184.8) & (original description: Putative gag, Description = Retrotransposon protein, putative, Ty1-copia subclass, PFAM = PF07727)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'nbv0.5scaffold78234_1-491' '(at4g23160 : 104.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (p10978|polx_tobac : 89.4) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco) & (reliability: 208.0) & (original description: Putative rTeg1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben044scf00000836ctg000_8228-10900' '(p10978|polx_tobac : 95.9) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco) & (at4g23160 : 81.3) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative glysoja_025782, Description = Copia-type polyprotein, PFAM = )' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben044scf00002927ctg008_1925-8541' '(p51614|chit3_vitvi : 394.0) Acidic endochitinase precursor (EC 3.2.1.14) - Vitis vinifera (Grape) & (at5g24090 : 393.0) Chitinase A (class III) expressed exclusively under environmental stress conditions.; chitinase A (CHIA); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to salt stress, response to cold, cellular response to water deprivation, response to wounding, response to light intensity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, chitinase active site (InterPro:IPR001579), Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39899 : 334.0) no description available & (gnl|cdd|47549 : 169.0) no description available & (reliability: 726.0) & (original description: Putative CHIB1, Description = Acidic endochitinase, PFAM = PF07714;PF00704)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben044scf00005698ctg028_1888-7707' '(gnl|cdd|36401 : 167.0) no description available & (at1g24030 : 117.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 120365 Blast hits to 119013 proteins in 4490 species: Archae - 114; Bacteria - 14164; Metazoa - 43937; Fungi - 10244; Plants - 33641; Viruses - 447; Other Eukaryotes - 17818 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 105.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47550 : 87.6) no description available & (reliability: 220.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF07714;PF00069)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben044scf00006597ctg009_1-1307' '(gnl|cdd|87352 : 160.0) no description available & (at4g23160 : 118.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (p10978|polx_tobac : 114.0) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco) & (reliability: 236.0) & (original description: Putative gag, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF07727)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben044scf00007694ctg019_1-2011' '(at4g27300 : 194.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT4G27290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 122.0) no description available & (reliability: 368.0) & (original description: Putative SRK, Description = Serine/threonine-protein kinase, PFAM = PF07714)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben044scf00008108ctg003_1419-3847' '(gnl|cdd|87352 : 188.0) no description available & (at4g23160 : 99.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (p10978|polx_tobac : 95.1) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco) & (reliability: 198.0) & (original description: Putative rTeg1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF07727)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben044scf00010599ctg000_29385-32244' '(at4g23160 : 226.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (p10978|polx_tobac : 149.0) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco) & (gnl|cdd|87352 : 108.0) no description available & (reliability: 452.0) & (original description: Putative rTeg1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF07727)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben044scf00011856ctg002_1-2829' '(at4g23160 : 206.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (p10978|polx_tobac : 129.0) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco) & (reliability: 412.0) & (original description: Putative rTeg1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben044scf00012275ctg002_2546-5343' '(at5g40380 : 186.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (CRK42); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (TAIR:AT1G70530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative CRK42, Description = Cysteine-rich receptor-like protein kinase 42, PFAM = PF01657;PF01657)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben044scf00013772ctg005_6854-8804' '(gnl|cdd|87352 : 121.0) no description available & (at4g23160 : 90.9) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative gag, Description = Retrotransposon protein, putative, Ty1-copia subclass, PFAM = PF07727)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben044scf00019421ctg001_11902-17394' '(at2g01660 : 268.0) Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.; plasmodesmata-located protein 6 (PDLP6); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: plasmodesmata-located protein 7 (TAIR:AT5G37660.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative CRRSP12, Description = Cysteine-rich repeat secretory protein 12, PFAM = PF01657;PF01657)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben044scf00032216ctg010_5136-9574' '(at1g11330 : 384.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-1 13 (TAIR:AT1G11350.1). & (gnl|cdd|36401 : 302.0) no description available & (q8lkz1|nork_pea : 192.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 166.0) no description available & (reliability: 730.0) & (original description: Putative SRK, Description = Serine/threonine-protein kinase, PFAM = PF00069;PF11883)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben044scf00055094ctg003_1-2447' '(gnl|cdd|36401 : 195.0) no description available & (at1g79620 : 134.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G49760.1); Has 173131 Blast hits to 132948 proteins in 4769 species: Archae - 163; Bacteria - 18653; Metazoa - 51943; Fungi - 10632; Plants - 70309; Viruses - 438; Other Eukaryotes - 20993 (source: NCBI BLink). & (q8l4h4|nork_medtr : 117.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 109.0) no description available & (reliability: 244.0) & (original description: Putative At3g26700, Description = Putative leucine-rich repeat receptor-like protein kinase, PFAM = PF07714)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf00167_25305-27864' '(at4g23160 : 82.8) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf00176_774197-779614' '(at4g21410 : 503.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 29 (CRK29); FUNCTIONS IN: kinase activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 28 (TAIR:AT4G21400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 345.0) no description available & (gnl|cdd|87344 : 183.0) no description available & (q8lkz1|nork_pea : 181.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 1006.0) & (original description: Putative CRK10, Description = Cysteine-rich receptor-like protein kinase 10, PFAM = PF07714;PF01657;PF01657)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf00177_911277-919523' '(gnl|cdd|36401 : 267.0) no description available & (at5g40380 : 194.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (CRK42); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (TAIR:AT1G70530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29142 : 172.0) no description available & (o24585|cri4_maize : 158.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 388.0) & (original description: Putative Sb08g000610, Description = Putative uncharacterized protein Sb08g000610, PFAM = PF00069)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf00301_479712-482167' '(at4g23160 : 121.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative At2g04490, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf01033_54555-60894' '(at1g70740 : 493.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 10 (TAIR:AT4G23180.1). & (gnl|cdd|36401 : 354.0) no description available & (q8lpb4|pskr_dauca : 222.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 184.0) no description available & (reliability: 986.0) & (original description: Putative BnaC06g31880D, Description = BnaC06g31880D protein, PFAM = PF07714)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf01033_188852-194205' '(at2g01660 : 248.0) Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.; plasmodesmata-located protein 6 (PDLP6); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: plasmodesmata-located protein 7 (TAIR:AT5G37660.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 496.0) & (original description: Putative CRRSP12, Description = Cysteine-rich repeat secretory protein 12, PFAM = PF01657;PF01657)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf01078_54833-61600' '(at5g40380 : 572.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (CRK42); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (TAIR:AT1G70530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 292.0) no description available & (q8l4h4|nork_medtr : 196.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 160.0) no description available & (reliability: 1144.0) & (original description: Putative CRK42, Description = Cysteine-rich receptor-like protein kinase 42, PFAM = PF01657;PF01657;PF00069)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf01230_152657-157388' '(at1g70520 : 822.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 2 (CRK2); FUNCTIONS IN: kinase activity; INVOLVED IN: response to ozone; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 123193 Blast hits to 121713 proteins in 4855 species: Archae - 110; Bacteria - 13886; Metazoa - 45515; Fungi - 10581; Plants - 34413; Viruses - 473; Other Eukaryotes - 18215 (source: NCBI BLink). & (gnl|cdd|36401 : 336.0) no description available & (q8l4h4|nork_medtr : 207.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 168.0) no description available & (reliability: 1644.0) & (original description: Putative CRK2, Description = Cysteine-rich receptor-like protein kinase 42, PFAM = PF01657;PF01657;PF07714)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf01826_524171-526704' '(at4g03230 : 154.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G11340.1); Has 120947 Blast hits to 117758 proteins in 4568 species: Archae - 89; Bacteria - 13334; Metazoa - 43594; Fungi - 9240; Plants - 36995; Viruses - 386; Other Eukaryotes - 17309 (source: NCBI BLink). & (gnl|cdd|36401 : 101.0) no description available & (reliability: 306.0) & (original description: Putative IRK1, Description = Serine/threonine-protein kinase, PFAM = PF07714;PF11883)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf01984_161205-165789' '(at1g70520 : 839.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 2 (CRK2); FUNCTIONS IN: kinase activity; INVOLVED IN: response to ozone; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 123193 Blast hits to 121713 proteins in 4855 species: Archae - 110; Bacteria - 13886; Metazoa - 45515; Fungi - 10581; Plants - 34413; Viruses - 473; Other Eukaryotes - 18215 (source: NCBI BLink). & (gnl|cdd|36401 : 340.0) no description available & (q8lkz1|nork_pea : 210.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|29142 : 169.0) no description available & (reliability: 1678.0) & (original description: Putative CRK2, Description = Cysteine-rich receptor-like protein kinase 2, PFAM = PF01657;PF01657;PF00069)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf02077_1015195-1017776' '(p10978|polx_tobac : 137.0) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco) & (at4g23160 : 134.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (gnl|cdd|87352 : 108.0) no description available & (reliability: 268.0) & (original description: Putative rTeg1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF07727)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf02939_186815-190635' '(at1g04520 : 311.0) plasmodesmata-located protein 2 (PDLP2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, plasmodesmata-mediated intercellular transport; LOCATED IN: plasmodesma; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: plasmodesmata-located protein 3 (TAIR:AT2G33330.1); Has 1091 Blast hits to 1028 proteins in 65 species: Archae - 0; Bacteria - 64; Metazoa - 5; Fungi - 13; Plants - 1007; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 598.0) & (original description: Putative CRRSP3, Description = Cysteine-rich repeat secretory protein 3, PFAM = PF01657;PF01657)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf03048_474145-478871' '(at1g04520 : 300.0) plasmodesmata-located protein 2 (PDLP2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, plasmodesmata-mediated intercellular transport; LOCATED IN: plasmodesma; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: plasmodesmata-located protein 3 (TAIR:AT2G33330.1); Has 1091 Blast hits to 1028 proteins in 65 species: Archae - 0; Bacteria - 64; Metazoa - 5; Fungi - 13; Plants - 1007; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 588.0) & (original description: Putative CRRSP3, Description = Cysteine-rich repeat secretory protein 3, PFAM = PF01657;PF01657)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf03154_58897-61361' '(at4g23160 : 85.5) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative gag, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf03362_640276-646144' '(at1g70530 : 743.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (CRK3); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 119727 Blast hits to 118238 proteins in 4920 species: Archae - 112; Bacteria - 13995; Metazoa - 44248; Fungi - 9864; Plants - 33587; Viruses - 452; Other Eukaryotes - 17469 (source: NCBI BLink). & (gnl|cdd|36401 : 330.0) no description available & (q8l4h4|nork_medtr : 192.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 175.0) no description available & (reliability: 1486.0) & (original description: Putative CRK3, Description = Cysteine-rich receptor-like protein kinase 3, PFAM = PF00069;PF01657;PF01657)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf03456_14699-18331' '(at1g04520 : 254.0) plasmodesmata-located protein 2 (PDLP2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, plasmodesmata-mediated intercellular transport; LOCATED IN: plasmodesma; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: plasmodesmata-located protein 3 (TAIR:AT2G33330.1); Has 1091 Blast hits to 1028 proteins in 65 species: Archae - 0; Bacteria - 64; Metazoa - 5; Fungi - 13; Plants - 1007; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 484.0) & (original description: Putative CRRSP3, Description = Cysteine-rich repeat secretory protein 3, PFAM = PF01657;PF01657)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf03595_1960586-1963106' '(at4g27300 : 158.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT4G27290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 91.7) no description available & (reliability: 288.0) & (original description: Putative SRK, Description = Serine/threonine-protein kinase, PFAM = PF07714)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf03653_259396-264685' '(at1g70530 : 383.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (CRK3); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 119727 Blast hits to 118238 proteins in 4920 species: Archae - 112; Bacteria - 13995; Metazoa - 44248; Fungi - 9864; Plants - 33587; Viruses - 452; Other Eukaryotes - 17469 (source: NCBI BLink). & (gnl|cdd|36401 : 360.0) no description available & (q8lkz1|nork_pea : 212.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 181.0) no description available & (reliability: 766.0) & (original description: Putative Os11g0470500, Description = Os11g0470500 protein, PFAM = PF07714;PF01657;PF01657)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf04555_264091-270672' '(at5g24090 : 392.0) Chitinase A (class III) expressed exclusively under environmental stress conditions.; chitinase A (CHIA); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to salt stress, response to cold, cellular response to water deprivation, response to wounding, response to light intensity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, chitinase active site (InterPro:IPR001579), Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p51614|chit3_vitvi : 392.0) Acidic endochitinase precursor (EC 3.2.1.14) - Vitis vinifera (Grape) & (gnl|cdd|39899 : 336.0) no description available & (gnl|cdd|47549 : 173.0) no description available & (reliability: 728.0) & (original description: Putative achi, Description = Serine/threonine-protein kinase, PFAM = PF00704;PF07714)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf05299_39171-46066' '(at4g21390 : 334.0) B120; FUNCTIONS IN: protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61610.1); Has 119638 Blast hits to 117946 proteins in 4361 species: Archae - 104; Bacteria - 13356; Metazoa - 43759; Fungi - 9937; Plants - 34742; Viruses - 415; Other Eukaryotes - 17325 (source: NCBI BLink). & (gnl|cdd|36401 : 334.0) no description available & (q8lkz1|nork_pea : 196.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 175.0) no description available & (reliability: 662.0) & (original description: Putative BnaA07g38960D, Description = BnaA07g38960D protein, PFAM = PF07714)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf06050_183950-186980' '(at4g23160 : 149.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (p10978|polx_tobac : 114.0) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco) & (gnl|cdd|87352 : 94.0) no description available & (reliability: 298.0) & (original description: Putative rTeg1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf06113_118312-123668' '(at4g23180 : 541.0) Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307); cysteine-rich RLK (RECEPTOR-like protein kinase) 10 (CRK10); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (TAIR:AT4G23160.1); Has 124145 Blast hits to 122467 proteins in 4564 species: Archae - 110; Bacteria - 14159; Metazoa - 45299; Fungi - 10862; Plants - 34986; Viruses - 473; Other Eukaryotes - 18256 (source: NCBI BLink). & (gnl|cdd|36401 : 340.0) no description available & (q8lkz1|nork_pea : 199.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 180.0) no description available & (reliability: 1082.0) & (original description: Putative CRK10, Description = Cysteine-rich receptor-like protein kinase 10, PFAM = PF07714;PF01657;PF01657)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf06155_1-13783' '(at3g04370 : 103.0) Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.; plasmodesmata-located protein 4 (PDLP4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: plasmodesmata-located protein 2 (TAIR:AT1G04520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative , Description = , PFAM = PF01657)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf06295_557741-563549' '(at4g23290 : 341.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 21 (CRK21); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 30 (TAIR:AT4G11460.1); Has 118308 Blast hits to 116879 proteins in 4391 species: Archae - 92; Bacteria - 13400; Metazoa - 43403; Fungi - 10140; Plants - 33618; Viruses - 391; Other Eukaryotes - 17264 (source: NCBI BLink). & (gnl|cdd|36401 : 313.0) no description available & (gnl|cdd|47913 : 235.0) no description available & (q8lpb4|pskr_dauca : 203.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 682.0) & (original description: Putative Chrk1, Description = Receptor-like kinase CHRK1, PFAM = PF07714;PF00704)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf07019_354700-363323' '(at4g28670 : 475.0) FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 2 (TAIR:AT1G70520.1); Has 117021 Blast hits to 115588 proteins in 4482 species: Archae - 87; Bacteria - 12256; Metazoa - 43536; Fungi - 10005; Plants - 33534; Viruses - 536; Other Eukaryotes - 17067 (source: NCBI BLink). & (gnl|cdd|36401 : 322.0) no description available & (q8lpb4|pskr_dauca : 190.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 168.0) no description available & (reliability: 950.0) & (original description: Putative CRK43, Description = Putative cysteine-rich receptor-like protein kinase 43, PFAM = PF01657;PF01657;PF00069)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf08341_16093-22555' '(at3g16030 : 388.0) CALLUS EXPRESSION OF RBCS 101 (CES101); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT4G21390.1); Has 121576 Blast hits to 119500 proteins in 4422 species: Archae - 101; Bacteria - 13477; Metazoa - 44302; Fungi - 10440; Plants - 35232; Viruses - 450; Other Eukaryotes - 17574 (source: NCBI BLink). & (gnl|cdd|36401 : 338.0) no description available & (q8lkz1|nork_pea : 207.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 171.0) no description available & (reliability: 734.0) & (original description: Putative CES101, Description = G-type lectin S-receptor-like serine/threonine-protein kinase CES101, PFAM = PF01453;PF08276;PF07714)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf08522_185102-188228' '(at4g23160 : 90.9) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative rTeg1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf11535_35152-38148' '(at1g04520 : 243.0) plasmodesmata-located protein 2 (PDLP2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, plasmodesmata-mediated intercellular transport; LOCATED IN: plasmodesma; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: plasmodesmata-located protein 3 (TAIR:AT2G33330.1); Has 1091 Blast hits to 1028 proteins in 65 species: Archae - 0; Bacteria - 64; Metazoa - 5; Fungi - 13; Plants - 1007; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative CRRSP3, Description = Cysteine-rich repeat secretory protein 3, PFAM = PF01657;PF01657)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf16150_62581-67178' '(at1g70520 : 798.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 2 (CRK2); FUNCTIONS IN: kinase activity; INVOLVED IN: response to ozone; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 123193 Blast hits to 121713 proteins in 4855 species: Archae - 110; Bacteria - 13886; Metazoa - 45515; Fungi - 10581; Plants - 34413; Viruses - 473; Other Eukaryotes - 18215 (source: NCBI BLink). & (gnl|cdd|36401 : 335.0) no description available & (q8l4h4|nork_medtr : 207.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 168.0) no description available & (reliability: 1596.0) & (original description: Putative CRK2, Description = Cysteine-rich receptor-like protein kinase 2, PFAM = PF01657;PF01657;PF07714)' T '30.2.17' 'signalling.receptor kinases.DUF 26' 'niben101scf17164_21816-28598' '(at5g40380 : 664.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (CRK42); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (TAIR:AT1G70530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 318.0) no description available & (q8l4h4|nork_medtr : 206.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 161.0) no description available & (reliability: 1328.0) & (original description: Putative CRK42, Description = Cysteine-rich receptor-like protein kinase 42, PFAM = PF00069;PF01657;PF01657)' T '30.2.18' 'signalling.receptor kinases.extensin' 'nbv0.3scaffold352_126087-131728' '(gnl|cdd|36401 : 167.0) no description available & (at1g24030 : 117.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 120365 Blast hits to 119013 proteins in 4490 species: Archae - 114; Bacteria - 14164; Metazoa - 43937; Fungi - 10244; Plants - 33641; Viruses - 447; Other Eukaryotes - 17818 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 103.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 86.0) no description available & (reliability: 214.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF07714;PF00069)' T '30.2.18' 'signalling.receptor kinases.extensin' 'nbv0.3scaffold13975_778-9223' '(at4g02010 : 829.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G20300.1); Has 117558 Blast hits to 116281 proteins in 4412 species: Archae - 107; Bacteria - 13740; Metazoa - 43399; Fungi - 9953; Plants - 33036; Viruses - 373; Other Eukaryotes - 16950 (source: NCBI BLink). & (gnl|cdd|36401 : 397.0) no description available & (q8l4h4|nork_medtr : 226.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 169.0) no description available & (reliability: 1658.0) & (original description: Putative coi2, Description = Receptor-like serine/threonine-protein kinase ALE2, PFAM = PF00069)' T '30.2.18' 'signalling.receptor kinases.extensin' 'nbv0.3scaffold32198_12833-19931' '(at5g56890 : 187.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G20300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative glysoja_031454, Description = Receptor-like serine/threonine-protein kinase ALE2, PFAM = )' T '30.2.18' 'signalling.receptor kinases.extensin' 'nbv0.5scaffold963_234022-243322' '(at5g56890 : 721.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G20300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 401.0) no description available & (q8lkz1|nork_pea : 242.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 189.0) no description available & (reliability: 1442.0) & (original description: Putative ALE2, Description = Receptor-like serine/threonine-protein kinase ALE2, PFAM = PF07714)' T '30.2.18' 'signalling.receptor kinases.extensin' 'niben044scf00015145ctg022_2271-8691' '(at2g20300 : 872.0) Encodes ABNORMAL LEAF SHAPE 2 (ALE2), a receptor-like protein kinase (RLK) with a cluster of basic amino acid residues followed by a cysteine-containing sequence in the putative extracellular domain. Function together with ACR4 (Arabidopsis homolog of the Crinkly4) and ALE1 in positively regulating protoderm-specific gene expression and for the formation of leafy organs. ale2 mutants have various epidermal defects, including disorganization of epidermis-related tissues, defects in the leaf cuticle and the fusion of organs.; Abnormal Leaf Shape 2 (ALE2); FUNCTIONS IN: kinase activity; INVOLVED IN: shoot development, organ formation, protoderm histogenesis, cuticle development; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G56890.1); Has 119232 Blast hits to 117654 proteins in 4402 species: Archae - 117; Bacteria - 14202; Metazoa - 43938; Fungi - 9729; Plants - 33678; Viruses - 349; Other Eukaryotes - 17219 (source: NCBI BLink). & (gnl|cdd|36401 : 395.0) no description available & (q8l4h4|nork_medtr : 261.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 181.0) no description available & (reliability: 1744.0) & (original description: Putative coi2, Description = CMV 1a interacting protein 2, PFAM = PF07714)' T '30.2.18' 'signalling.receptor kinases.extensin' 'niben044scf00030427ctg001_10170-18540' '(at4g02010 : 854.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G20300.1); Has 117558 Blast hits to 116281 proteins in 4412 species: Archae - 107; Bacteria - 13740; Metazoa - 43399; Fungi - 9953; Plants - 33036; Viruses - 373; Other Eukaryotes - 16950 (source: NCBI BLink). & (gnl|cdd|36401 : 393.0) no description available & (q8l4h4|nork_medtr : 226.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 169.0) no description available & (reliability: 1708.0) & (original description: Putative coi2, Description = Receptor-like serine/threonine-protein kinase ALE2, PFAM = PF00069)' T '30.2.18' 'signalling.receptor kinases.extensin' 'niben101scf00177_911277-919523' '(gnl|cdd|36401 : 267.0) no description available & (at5g40380 : 194.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (CRK42); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (TAIR:AT1G70530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29142 : 172.0) no description available & (o24585|cri4_maize : 158.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 370.0) & (original description: Putative Sb08g000610, Description = Putative uncharacterized protein Sb08g000610, PFAM = PF00069)' T '30.2.18' 'signalling.receptor kinases.extensin' 'niben101scf00370_183035-188469' '(at1g54820 : 431.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G58690.1); Has 106030 Blast hits to 104996 proteins in 3211 species: Archae - 91; Bacteria - 12815; Metazoa - 37555; Fungi - 8802; Plants - 31337; Viruses - 314; Other Eukaryotes - 15116 (source: NCBI BLink). & (gnl|cdd|36401 : 358.0) no description available & (o24585|cri4_maize : 215.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|88314 : 164.0) no description available & (reliability: 862.0) & (original description: Putative coi2, Description = Serine/threonine-protein kinase PBS1, PFAM = PF00069)' T '30.2.18' 'signalling.receptor kinases.extensin' 'niben101scf00793_794419-941306' '(at4g02010 : 863.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G20300.1); Has 117558 Blast hits to 116281 proteins in 4412 species: Archae - 107; Bacteria - 13740; Metazoa - 43399; Fungi - 9953; Plants - 33036; Viruses - 373; Other Eukaryotes - 16950 (source: NCBI BLink). & (gnl|cdd|36401 : 397.0) no description available & (q8l4h4|nork_medtr : 226.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 169.0) no description available & (reliability: 1726.0) & (original description: Putative coi2, Description = Receptor-like serine/threonine-protein kinase ALE2, PFAM = PF00069)' T '30.2.18' 'signalling.receptor kinases.extensin' 'niben101scf02078_428983-439846' '(at5g56890 : 691.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G20300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 390.0) no description available & (q8lkz1|nork_pea : 255.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 179.0) no description available & (reliability: 1382.0) & (original description: Putative coi2, Description = Receptor-like serine/threonine-protein kinase ALE2, PFAM = PF07714)' T '30.2.18' 'signalling.receptor kinases.extensin' 'niben101scf02142_295281-304873' '(at5g56890 : 723.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G20300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 401.0) no description available & (q8lkz1|nork_pea : 243.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 189.0) no description available & (reliability: 1446.0) & (original description: Putative ALE2, Description = Receptor-like serine/threonine-protein kinase ALE2, PFAM = PF07714)' T '30.2.18' 'signalling.receptor kinases.extensin' 'niben101scf03276_459-6563' '(at3g58690 : 593.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G54820.1); Has 119556 Blast hits to 118228 proteins in 3954 species: Archae - 119; Bacteria - 14059; Metazoa - 43160; Fungi - 10190; Plants - 33928; Viruses - 396; Other Eukaryotes - 17704 (source: NCBI BLink). & (gnl|cdd|36401 : 370.0) no description available & (q8l4h4|nork_medtr : 257.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 171.0) no description available & (reliability: 1186.0) & (original description: Putative At3g58690, Description = Protein kinase family protein, PFAM = PF07714)' T '30.2.18' 'signalling.receptor kinases.extensin' 'niben101scf03534_51831-55923' '(gnl|cdd|36401 : 273.0) no description available & (at4g02010 : 199.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G20300.1); Has 117558 Blast hits to 116281 proteins in 4412 species: Archae - 107; Bacteria - 13740; Metazoa - 43399; Fungi - 9953; Plants - 33036; Viruses - 373; Other Eukaryotes - 16950 (source: NCBI BLink). & (q8l4h4|nork_medtr : 191.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47550 : 155.0) no description available & (reliability: 398.0) & (original description: Putative pto, Description = Putative receptor-like protein kinase, PFAM = PF00069)' T '30.2.18' 'signalling.receptor kinases.extensin' 'niben101scf04172_516961-531014' '(at2g20300 : 863.0) Encodes ABNORMAL LEAF SHAPE 2 (ALE2), a receptor-like protein kinase (RLK) with a cluster of basic amino acid residues followed by a cysteine-containing sequence in the putative extracellular domain. Function together with ACR4 (Arabidopsis homolog of the Crinkly4) and ALE1 in positively regulating protoderm-specific gene expression and for the formation of leafy organs. ale2 mutants have various epidermal defects, including disorganization of epidermis-related tissues, defects in the leaf cuticle and the fusion of organs.; Abnormal Leaf Shape 2 (ALE2); FUNCTIONS IN: kinase activity; INVOLVED IN: shoot development, organ formation, protoderm histogenesis, cuticle development; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G56890.1); Has 119232 Blast hits to 117654 proteins in 4402 species: Archae - 117; Bacteria - 14202; Metazoa - 43938; Fungi - 9729; Plants - 33678; Viruses - 349; Other Eukaryotes - 17219 (source: NCBI BLink). & (gnl|cdd|36401 : 400.0) no description available & (q8l4h4|nork_medtr : 261.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 182.0) no description available & (reliability: 1726.0) & (original description: Putative coi2, Description = CMV 1a interacting protein 2, PFAM = PF07714)' T '30.2.18' 'signalling.receptor kinases.extensin' 'niben101scf04232_100342-108533' '(at4g02010 : 851.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G20300.1); Has 117558 Blast hits to 116281 proteins in 4412 species: Archae - 107; Bacteria - 13740; Metazoa - 43399; Fungi - 9953; Plants - 33036; Viruses - 373; Other Eukaryotes - 16950 (source: NCBI BLink). & (gnl|cdd|36401 : 394.0) no description available & (q8l4h4|nork_medtr : 226.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 170.0) no description available & (reliability: 1702.0) & (original description: Putative coi2, Description = Receptor-like serine/threonine-protein kinase ALE2, PFAM = PF00069)' T '30.2.18' 'signalling.receptor kinases.extensin' 'niben101scf22806_23324-30422' '(at5g56890 : 205.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G20300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 410.0) & (original description: Putative glysoja_023351, Description = Receptor-like serine/threonine-protein kinase ALE2, PFAM = )' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'nbv0.3scaffold4402_79-4199' '(at5g10530 : 484.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G65600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 331.0) no description available & (gnl|cdd|29142 : 191.0) no description available & (q8lpb4|pskr_dauca : 171.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 968.0) & (original description: Putative LecRK, Description = Clade XVII lectin receptor kinase, PFAM = PF00139;PF00069)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'nbv0.3scaffold17541_1517-7081' '(at5g06740 : 425.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Legume lectin, beta chain, Mn/Ca-binding site (InterPro:IPR019825); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G55830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 312.0) no description available & (gnl|cdd|84552 : 186.0) no description available & (q8lpb4|pskr_dauca : 169.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 850.0) & (original description: Putative LecRK, Description = Clade XVI lectin receptor kinase, PFAM = PF00139;PF00069)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'nbv0.3scaffold21492_24309-31730' '(gnl|cdd|36401 : 145.0) no description available & (at1g11050 : 116.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor-like kinase in in flowers 3 (TAIR:AT2G48010.1); Has 115297 Blast hits to 114175 proteins in 4324 species: Archae - 104; Bacteria - 13350; Metazoa - 42303; Fungi - 9816; Plants - 32853; Viruses - 335; Other Eukaryotes - 16536 (source: NCBI BLink). & (gnl|cdd|29142 : 107.0) no description available & (o24585|cri4_maize : 89.7) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 210.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF00069)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'nbv0.5scaffold9508_11374-18093' '(at4g04960 : 365.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT4G28350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 294.0) no description available & (q8lpb4|pskr_dauca : 184.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 161.0) no description available & (reliability: 730.0) & (original description: Putative 3, Description = L-type lectin-domain containing receptor kinase S.4, PFAM = PF00069)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'nbv0.5scaffold74906_1-507' '(at4g04960 : 87.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT4G28350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative LecRK, Description = L-type lectin-domain containing receptor kinase VII.1, PFAM = PF00139)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben044scf00006201ctg003_271-3995' '(at5g42120 : 619.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Legume lectin, beta chain, Mn/Ca-binding site (InterPro:IPR019825); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G55830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 299.0) no description available & (q8lpb4|pskr_dauca : 191.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84552 : 158.0) no description available & (reliability: 1238.0) & (original description: Putative LECRKS6, Description = L-type lectin-domain containing receptor kinase S.6, PFAM = PF00139;PF07714)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben044scf00025429ctg000_10958-13474' '(at4g04960 : 278.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT4G28350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84552 : 212.0) no description available & (reliability: 556.0) & (original description: Putative 2, Description = L-type lectin-domain receptor kinase IV.2-like protein, PFAM = PF00139)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben044scf00052378ctg001_15249-17728' '(gnl|cdd|84552 : 116.0) no description available & (at3g55550 : 88.2) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G53810.1); Has 119390 Blast hits to 117908 proteins in 4651 species: Archae - 98; Bacteria - 13453; Metazoa - 44108; Fungi - 10128; Plants - 34151; Viruses - 398; Other Eukaryotes - 17054 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative , Description = Alpha-amylase inhibitor alpha subunit family protein, PFAM = PF00139)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben044scf00056619ctg000_3297-7132' '(at3g55550 : 678.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G53810.1); Has 119390 Blast hits to 117908 proteins in 4651 species: Archae - 98; Bacteria - 13453; Metazoa - 44108; Fungi - 10128; Plants - 34151; Viruses - 398; Other Eukaryotes - 17054 (source: NCBI BLink). & (gnl|cdd|36401 : 331.0) no description available & (gnl|cdd|84552 : 269.0) no description available & (q8lpb4|pskr_dauca : 182.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1356.0) & (original description: Putative LECRKS4, Description = L-type lectin-domain containing receptor kinase S.4, PFAM = PF00139;PF00069)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101ctg12623_1-1601' '(at5g10530 : 206.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G65600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 120.0) no description available & (gnl|cdd|47549 : 89.1) no description available & (q8l4h4|nork_medtr : 80.1) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 412.0) & (original description: Putative LecRK, Description = Clade XVIII lectin receptor kinase, PFAM = PF00069;PF00139;PF00139)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101scf00096_429788-433824' '(at5g06740 : 632.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Legume lectin, beta chain, Mn/Ca-binding site (InterPro:IPR019825); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G55830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 286.0) no description available & (gnl|cdd|84552 : 187.0) no description available & (q8lpb4|pskr_dauca : 172.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1264.0) & (original description: Putative LECRKS5, Description = Probable L-type lectin-domain containing receptor kinase S.5, PFAM = PF00139;PF00069)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101scf00904_383414-387333' '(at5g10530 : 393.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G65600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 240.0) no description available & (gnl|cdd|29142 : 131.0) no description available & (q8l4h4|nork_medtr : 128.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 786.0) & (original description: Putative LecRK, Description = Clade IX lectin receptor kinase, PFAM = PF00139;PF00069;PF00069)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101scf01154_1838824-1845284' '(at5g06740 : 433.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Legume lectin, beta chain, Mn/Ca-binding site (InterPro:IPR019825); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G55830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 314.0) no description available & (gnl|cdd|84552 : 184.0) no description available & (q8lpb4|pskr_dauca : 169.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 866.0) & (original description: Putative LecRK, Description = Clade XVI lectin receptor kinase, PFAM = PF00139;PF00069)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101scf01333_123936-128449' '(at2g32800 : 913.0) AP4.3A; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G53810.1); Has 158212 Blast hits to 101795 proteins in 4184 species: Archae - 108; Bacteria - 18021; Metazoa - 52899; Fungi - 11286; Plants - 55530; Viruses - 412; Other Eukaryotes - 19956 (source: NCBI BLink). & (gnl|cdd|36401 : 278.0) no description available & (q8lpb4|pskr_dauca : 202.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 161.0) no description available & (reliability: 1826.0) & (original description: Putative LECRKS2, Description = Receptor like protein kinase S.2, PFAM = PF07714;PF00069)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101scf01656_83190-88528' '(at5g55830 : 248.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G53380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 195.0) no description available & (gnl|cdd|84552 : 190.0) no description available & (q8lpb4|pskr_dauca : 120.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 496.0) & (original description: Putative LecRK, Description = Clade XV lectin receptor kinase, PFAM = PF00069;PF00139)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101scf01677_246646-251313' '(at5g06740 : 224.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Legume lectin, beta chain, Mn/Ca-binding site (InterPro:IPR019825); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G55830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84552 : 159.0) no description available & (gnl|cdd|36401 : 138.0) no description available & (p16270|lecn_pea : 83.2) Nonseed lectin precursor - Pisum sativum (Garden pea) & (reliability: 448.0) & (original description: Putative LecRK, Description = Clade XVI lectin receptor kinase, PFAM = PF00139;PF00069)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101scf01858_84070-88238' '(at5g06740 : 346.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Legume lectin, beta chain, Mn/Ca-binding site (InterPro:IPR019825); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G55830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 300.0) no description available & (q8lpb4|pskr_dauca : 173.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 169.0) no description available & (reliability: 692.0) & (original description: Putative LecRK, Description = Lectin receptor kinase, PFAM = PF00139;PF00069)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101scf01999_578663-582783' '(at5g10530 : 487.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G65600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 331.0) no description available & (gnl|cdd|29142 : 191.0) no description available & (q8lpb4|pskr_dauca : 170.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 974.0) & (original description: Putative LECRK91, Description = L-type lectin-domain containing receptor kinase IX.1, PFAM = PF00139;PF00069)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101scf02085_1249781-1253119' '(at3g55550 : 472.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G53810.1); Has 119390 Blast hits to 117908 proteins in 4651 species: Archae - 98; Bacteria - 13453; Metazoa - 44108; Fungi - 10128; Plants - 34151; Viruses - 398; Other Eukaryotes - 17054 (source: NCBI BLink). & (gnl|cdd|36401 : 283.0) no description available & (q8lpb4|pskr_dauca : 172.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 137.0) no description available & (reliability: 944.0) & (original description: Putative LecRK, Description = Lectin receptor kinase, PFAM = PF00069;PF00139)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101scf02583_533-4539' '(at2g37710 : 721.0) Induced in response to Salicylic acid.; receptor lectin kinase (RLK); FUNCTIONS IN: kinase activity; INVOLVED IN: response to salicylic acid stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G53810.1); Has 113290 Blast hits to 111820 proteins in 4637 species: Archae - 92; Bacteria - 13273; Metazoa - 41290; Fungi - 9298; Plants - 33316; Viruses - 357; Other Eukaryotes - 15664 (source: NCBI BLink). & (gnl|cdd|36401 : 324.0) no description available & (gnl|cdd|84552 : 270.0) no description available & (q8lpb4|pskr_dauca : 190.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1356.0) & (original description: Putative LECRK41, Description = L-type lectin-domain containing receptor kinase IV.1, PFAM = PF00069;PF00139)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101scf02583_137131-141437' '(at3g55550 : 697.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G53810.1); Has 119390 Blast hits to 117908 proteins in 4651 species: Archae - 98; Bacteria - 13453; Metazoa - 44108; Fungi - 10128; Plants - 34151; Viruses - 398; Other Eukaryotes - 17054 (source: NCBI BLink). & (gnl|cdd|36401 : 332.0) no description available & (gnl|cdd|84552 : 269.0) no description available & (q8lpb4|pskr_dauca : 182.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1394.0) & (original description: Putative LECRKS4, Description = L-type lectin-domain containing receptor kinase S.4, PFAM = PF00139;PF00069)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101scf02740_984611-988587' '(at5g10530 : 723.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G65600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 333.0) no description available & (gnl|cdd|84552 : 201.0) no description available & (o24585|cri4_maize : 176.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 1446.0) & (original description: Putative LECRK91, Description = L-type lectin-domain containing receptor kinase IX.1, PFAM = PF00069;PF00139)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101scf03202_1212291-1216327' '(at5g01550 : 625.0) Encodes LecRKA4.2, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination.; lectin receptor kinase a4.1 (LECRKA4.2); FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: abscisic acid mediated signaling pathway, seed germination; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: lectin receptor kinase a4.3 (TAIR:AT5G01560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 308.0) no description available & (gnl|cdd|84552 : 260.0) no description available & (q8lpb4|pskr_dauca : 206.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1220.0) & (original description: Putative LECRK63, Description = Lectin-domain containing receptor kinase VI.3, PFAM = PF00069;PF00139)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101scf03376_526095-530215' '(at5g10530 : 486.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G65600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 335.0) no description available & (gnl|cdd|84552 : 204.0) no description available & (q8lpb4|pskr_dauca : 176.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 972.0) & (original description: Putative LECRK91, Description = L-type lectin-domain containing receptor kinase IX.1, PFAM = PF00139;PF00069)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101scf03768_391126-395111' '(at5g55830 : 246.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G53380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 199.0) no description available & (gnl|cdd|84552 : 186.0) no description available & (q8lpb4|pskr_dauca : 120.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 492.0) & (original description: Putative LecRK, Description = Clade XV lectin receptor kinase, PFAM = PF07714;PF00139)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101scf03944_530514-534586' '(at3g55550 : 769.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G53810.1); Has 119390 Blast hits to 117908 proteins in 4651 species: Archae - 98; Bacteria - 13453; Metazoa - 44108; Fungi - 10128; Plants - 34151; Viruses - 398; Other Eukaryotes - 17054 (source: NCBI BLink). & (gnl|cdd|36401 : 326.0) no description available & (gnl|cdd|84552 : 265.0) no description available & (q8lpb4|pskr_dauca : 207.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1538.0) & (original description: Putative LECRKS4, Description = L-type lectin-domain containing receptor kinase S.4, PFAM = PF00139;PF00069)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101scf05629_18537-22609' '(at3g55550 : 781.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G53810.1); Has 119390 Blast hits to 117908 proteins in 4651 species: Archae - 98; Bacteria - 13453; Metazoa - 44108; Fungi - 10128; Plants - 34151; Viruses - 398; Other Eukaryotes - 17054 (source: NCBI BLink). & (gnl|cdd|36401 : 325.0) no description available & (gnl|cdd|84552 : 260.0) no description available & (q8lpb4|pskr_dauca : 202.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1562.0) & (original description: Putative LecRK, Description = Lectin receptor kinase, PFAM = PF00139;PF00069)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101scf06725_273230-277242' '(at5g55830 : 841.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G53380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 318.0) no description available & (gnl|cdd|84552 : 216.0) no description available & (q8l4h4|nork_medtr : 197.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1682.0) & (original description: Putative LECRKS7, Description = Probable L-type lectin-domain containing receptor kinase S.7, PFAM = PF00069;PF00139)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101scf07589_101985-106105' '(at5g10530 : 541.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G65600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 326.0) no description available & (q8l4h4|nork_medtr : 193.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 180.0) no description available & (reliability: 1082.0) & (original description: Putative LECRK91, Description = L-type lectin-domain containing receptor kinase IX.1, PFAM = PF00069;PF00139)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101scf07640_209613-216475' '(at5g06740 : 396.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Legume lectin, beta chain, Mn/Ca-binding site (InterPro:IPR019825); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G55830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 307.0) no description available & (gnl|cdd|84552 : 185.0) no description available & (q8lkz1|nork_pea : 170.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 792.0) & (original description: Putative LecRK, Description = Clade XVI lectin receptor kinase, PFAM = PF00069;PF00139)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101scf07690_17617-21789' '(at5g42120 : 601.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Legume lectin, beta chain, Mn/Ca-binding site (InterPro:IPR019825); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G55830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 303.0) no description available & (q8lpb4|pskr_dauca : 193.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84552 : 158.0) no description available & (reliability: 1202.0) & (original description: Putative LecRK, Description = Clade XIII lectin receptor kinase, PFAM = PF00139;PF00069)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101scf08446_416848-420957' '(at4g04960 : 768.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT4G28350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 312.0) no description available & (gnl|cdd|84552 : 241.0) no description available & (q8lpb4|pskr_dauca : 197.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1536.0) & (original description: Putative LECRK71, Description = L-type lectin-domain containing receptor kinase VII.1, PFAM = PF00139;PF00069)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101scf09133_301571-305320' '(at5g06740 : 450.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Legume lectin, beta chain, Mn/Ca-binding site (InterPro:IPR019825); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G55830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 216.0) no description available & (gnl|cdd|84552 : 175.0) no description available & (q8lpb4|pskr_dauca : 129.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 900.0) & (original description: Putative LECRKS5, Description = Probable L-type lectin-domain containing receptor kinase S.5, PFAM = PF00069;PF00139)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101scf16532_43800-48185' '(at5g42120 : 625.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Legume lectin, beta chain, Mn/Ca-binding site (InterPro:IPR019825); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G55830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 308.0) no description available & (q8lpb4|pskr_dauca : 194.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84552 : 160.0) no description available & (reliability: 1250.0) & (original description: Putative LECRKS6, Description = L-type lectin-domain containing receptor kinase S.6, PFAM = PF00139;PF07714)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101scf17983_13837-18075' '(at3g55550 : 549.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G53810.1); Has 119390 Blast hits to 117908 proteins in 4651 species: Archae - 98; Bacteria - 13453; Metazoa - 44108; Fungi - 10128; Plants - 34151; Viruses - 398; Other Eukaryotes - 17054 (source: NCBI BLink). & (gnl|cdd|36401 : 266.0) no description available & (gnl|cdd|84552 : 223.0) no description available & (p17801|kpro_maize : 167.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 1098.0) & (original description: Putative LecRK, Description = Clade XI lectin receptor kinase, PFAM = PF00069;PF00139)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101scf21897_8224-12257' '(at5g01550 : 611.0) Encodes LecRKA4.2, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination.; lectin receptor kinase a4.1 (LECRKA4.2); FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: abscisic acid mediated signaling pathway, seed germination; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: lectin receptor kinase a4.3 (TAIR:AT5G01560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 313.0) no description available & (gnl|cdd|84552 : 255.0) no description available & (q8lpb4|pskr_dauca : 204.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1220.0) & (original description: Putative LECRK63, Description = Lectin-domain containing receptor kinase VI.3, PFAM = PF00069;PF00139)' T '30.2.19' 'signalling.receptor kinases.legume-lectin' 'niben101scf28115_68561-72558' '(at2g37710 : 695.0) Induced in response to Salicylic acid.; receptor lectin kinase (RLK); FUNCTIONS IN: kinase activity; INVOLVED IN: response to salicylic acid stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G53810.1); Has 113290 Blast hits to 111820 proteins in 4637 species: Archae - 92; Bacteria - 13273; Metazoa - 41290; Fungi - 9298; Plants - 33316; Viruses - 357; Other Eukaryotes - 15664 (source: NCBI BLink). & (gnl|cdd|36401 : 325.0) no description available & (gnl|cdd|84552 : 289.0) no description available & (q8lpb4|pskr_dauca : 189.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1358.0) & (original description: Putative LECRK41, Description = L-type lectin-domain containing receptor kinase IV.1, PFAM = PF00069;PF00139)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'nbv0.3scaffold3735_86221-90752' '(at5g38280 : 348.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 299.0) no description available & (p17801|kpro_maize : 190.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 171.0) no description available & (reliability: 694.0) & (original description: Putative glysoja_028070, Description = Putative receptor-like protein kinase, PFAM = PF13947;PF00069)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'nbv0.3scaffold4847_59137-63043' '(at1g66920 : 331.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1). & (gnl|cdd|36401 : 291.0) no description available & (p17801|kpro_maize : 198.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 165.0) no description available & (reliability: 662.0) & (original description: Putative drpk1, Description = Receptor-like kinase, PFAM = PF13947;PF00069)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'nbv0.3scaffold4847_63045-66534' '(at5g38280 : 348.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 300.0) no description available & (p17801|kpro_maize : 191.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 178.0) no description available & (reliability: 690.0) & (original description: Putative glysoja_028070, Description = Putative receptor-like protein kinase, PFAM = PF00069;PF13947)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'nbv0.3scaffold23870_13028-26758' '(at1g18390 : 545.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66880.1); Has 128125 Blast hits to 126473 proteins in 4812 species: Archae - 110; Bacteria - 14433; Metazoa - 47787; Fungi - 10757; Plants - 35416; Viruses - 568; Other Eukaryotes - 19054 (source: NCBI BLink). & (gnl|cdd|36401 : 348.0) no description available & (q8l4h4|nork_medtr : 208.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 183.0) no description available & (reliability: 1090.0) & (original description: Putative LRK10L1, Description = Putative serine/threonine-protein kinase, PFAM = PF13947;PF14380;PF00069)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'nbv0.3scaffold35280_9719-14656' '(at4g18250 : 362.0) receptor serine/threonine kinase, putative; FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, LP.02 two leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 120088 Blast hits to 117149 proteins in 4431 species: Archae - 164; Bacteria - 12523; Metazoa - 44044; Fungi - 10148; Plants - 35501; Viruses - 371; Other Eukaryotes - 17337 (source: NCBI BLink). & (gnl|cdd|36401 : 312.0) no description available & (p17801|kpro_maize : 197.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 164.0) no description available & (reliability: 724.0) & (original description: Putative Os04g0177000, Description = Os04g0177000 protein, PFAM = PF14380;PF00069)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'nbv0.3scaffold35280_9776-14713' '(at5g38260 : 363.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 311.0) no description available & (p17801|kpro_maize : 197.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 164.0) no description available & (reliability: 726.0) & (original description: Putative glysoja_021226, Description = Putative receptor-like protein kinase, PFAM = PF00069;PF14380)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'nbv0.3scaffold48217_9319-13906' '(at1g25390 : 443.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18390.2); Has 125531 Blast hits to 123961 proteins in 4878 species: Archae - 118; Bacteria - 14377; Metazoa - 46593; Fungi - 10981; Plants - 34187; Viruses - 597; Other Eukaryotes - 18678 (source: NCBI BLink). & (gnl|cdd|36401 : 307.0) no description available & (q8l4h4|nork_medtr : 191.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 169.0) no description available & (reliability: 886.0) & (original description: Putative LRK10L1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'nbv0.3scaffold54324_1271-6310' '(at1g25390 : 509.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18390.2); Has 125531 Blast hits to 123961 proteins in 4878 species: Archae - 118; Bacteria - 14377; Metazoa - 46593; Fungi - 10981; Plants - 34187; Viruses - 597; Other Eukaryotes - 18678 (source: NCBI BLink). & (gnl|cdd|36401 : 343.0) no description available & (q8lkz1|nork_pea : 216.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|29142 : 170.0) no description available & (reliability: 1018.0) & (original description: Putative LRK10L1, Description = Putative serine/threonine-protein kinase, PFAM = PF14380;PF00069)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'nbv0.3scaffold61999_453-6553' '(at1g18390 : 525.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66880.1); Has 128125 Blast hits to 126473 proteins in 4812 species: Archae - 110; Bacteria - 14433; Metazoa - 47787; Fungi - 10757; Plants - 35416; Viruses - 568; Other Eukaryotes - 19054 (source: NCBI BLink). & (gnl|cdd|36401 : 346.0) no description available & (q8l4h4|nork_medtr : 215.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 179.0) no description available & (reliability: 1050.0) & (original description: Putative LRK10L1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069;PF13947;PF14380)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'nbv0.5scaffold1066_241186-245814' '(at5g38280 : 330.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 290.0) no description available & (p17801|kpro_maize : 188.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 167.0) no description available & (reliability: 634.0) & (original description: Putative PGSC0003DMG400010701, Description = Stress-induced receptor-like kinase, PFAM = PF00069;PF13947)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'nbv0.5scaffold1380_130405-150040' '(at5g38260 : 342.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 274.0) no description available & (p17801|kpro_maize : 194.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 170.0) no description available & (reliability: 684.0) & (original description: Putative glysoja_028070, Description = Putative receptor-like protein kinase, PFAM = PF13947;PF00069)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'nbv0.5scaffold1631_131871-412560' '(at1g70250 : 312.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 214.0) no description available & (p17801|kpro_maize : 147.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 118.0) no description available & (reliability: 592.0) & (original description: Putative KK1_035972, Description = Putative receptor-like protein kinase At5g39020 family, PFAM = PF00069)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'nbv0.5scaffold2318_130525-138616' '(at1g66980 : 103.0) Encodes SNC4 (suppressor of npr1-1, constitutive 4), an atypical receptor-like kinase with two predicted extracellular glycerophosphoryl diester phosphodiesterase domains.; suppressor of npr1-1 constitutive 4 (SNC4); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Protein kinase, catalytic domain (InterPro:IPR000719), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: SHV3-like 2 (TAIR:AT1G66970.1); Has 115599 Blast hits to 113492 proteins in 4573 species: Archae - 153; Bacteria - 13353; Metazoa - 42961; Fungi - 9619; Plants - 32809; Viruses - 285; Other Eukaryotes - 16419 (source: NCBI BLink). & (gnl|cdd|36401 : 87.8) no description available & (reliability: 194.2) & (original description: Putative PGSC0003DMG400010495, Description = Receptor-like kinase, PFAM = PF07714)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'nbv0.5scaffold3655_87658-91595' '(at5g38280 : 355.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 297.0) no description available & (p17801|kpro_maize : 192.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 169.0) no description available & (reliability: 674.0) & (original description: Putative PGSC0003DMG400010484, Description = Stress-induced receptor-like kinase, PFAM = PF00069)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'nbv0.5scaffold3655_155523-159639' '(at5g38280 : 347.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 300.0) no description available & (p17801|kpro_maize : 191.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 178.0) no description available & (reliability: 694.0) & (original description: Putative PGSC0003DMG400020899, Description = Stress-induced receptor-like kinase, PFAM = PF00069;PF13947)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben044scf00005266ctg002_1-4145' '(at5g38280 : 348.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 300.0) no description available & (p17801|kpro_maize : 191.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 177.0) no description available & (reliability: 690.0) & (original description: Putative glysoja_033594, Description = Putative receptor-like protein kinase, PFAM = PF13947;PF00069)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben044scf00005266ctg003_1-2204' '(at1g70250 : 281.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 248.0) no description available & (p17801|kpro_maize : 160.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 138.0) no description available & (reliability: 556.0) & (original description: Putative drpk1, Description = Receptor-like kinase, PFAM = PF00069)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben044scf00005266ctg007_7847-12072' '(at5g38280 : 351.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 298.0) no description available & (p17801|kpro_maize : 191.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 170.0) no description available & (reliability: 668.0) & (original description: Putative PGSC0003DMG400010484, Description = Stress-induced receptor-like kinase, PFAM = PF13947;PF00069)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben044scf00005963ctg017_1005-5633' '(at5g38280 : 330.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 290.0) no description available & (p17801|kpro_maize : 188.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 167.0) no description available & (reliability: 636.0) & (original description: Putative PGSC0003DMG400031485, Description = Stress-induced receptor-like kinase, PFAM = PF13947;PF00069)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben044scf00013151ctg008_1772-6997' '(at1g25390 : 477.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18390.2); Has 125531 Blast hits to 123961 proteins in 4878 species: Archae - 118; Bacteria - 14377; Metazoa - 46593; Fungi - 10981; Plants - 34187; Viruses - 597; Other Eukaryotes - 18678 (source: NCBI BLink). & (gnl|cdd|36401 : 335.0) no description available & (q8l4h4|nork_medtr : 208.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 169.0) no description available & (reliability: 954.0) & (original description: Putative LRK10L1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben044scf00017942ctg004_1140-5648' '(at1g18390 : 612.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66880.1); Has 128125 Blast hits to 126473 proteins in 4812 species: Archae - 110; Bacteria - 14433; Metazoa - 47787; Fungi - 10757; Plants - 35416; Viruses - 568; Other Eukaryotes - 19054 (source: NCBI BLink). & (gnl|cdd|36401 : 342.0) no description available & (q8l4h4|nork_medtr : 205.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 179.0) no description available & (reliability: 1224.0) & (original description: Putative LRK10L1, Description = Putative serine/threonine-protein kinase, PFAM = PF14380;PF00069;PF13947)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben044scf00026280ctg006_1-2254' '(gnl|cdd|36401 : 288.0) no description available & (at5g38280 : 286.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p17801|kpro_maize : 170.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 170.0) no description available & (reliability: 528.0) & (original description: Putative glysoja_036704, Description = Putative receptor-like protein kinase, PFAM = PF00069)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben044scf00027232ctg000_1-1492' '(at1g70250 : 129.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 89.8) no description available & (reliability: 250.0) & (original description: Putative drpk1, Description = Receptor-like kinase, PFAM = PF00069)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben044scf00029680ctg004_2945-6016' '(at1g67000 : 318.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66930.1); Has 113853 Blast hits to 112150 proteins in 4512 species: Archae - 151; Bacteria - 11870; Metazoa - 43414; Fungi - 9147; Plants - 32426; Viruses - 293; Other Eukaryotes - 16552 (source: NCBI BLink). & (gnl|cdd|36401 : 288.0) no description available & (p17801|kpro_maize : 196.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 165.0) no description available & (reliability: 636.0) & (original description: Putative drpk1, Description = Receptor-like kinase, PFAM = PF00069)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben044scf00030827ctg001_6893-11996' '(at5g38260 : 361.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 291.0) no description available & (p17801|kpro_maize : 199.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 168.0) no description available & (reliability: 722.0) & (original description: Putative glysoja_028070, Description = Putative receptor-like protein kinase, PFAM = PF13947;PF00069;PF14380)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben044scf00055754ctg000_3233-6569' '(at1g70250 : 309.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 213.0) no description available & (p17801|kpro_maize : 145.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 116.0) no description available & (reliability: 592.0) & (original description: Putative KK1_035972, Description = Putative receptor-like protein kinase At5g39020 family, PFAM = PF00069)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben101ctg15354_819-3947' '(at5g38280 : 156.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 152.0) no description available & (p17801|kpro_maize : 116.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 101.0) no description available & (reliability: 302.0) & (original description: Putative PGSC0003DMG400010499, Description = PR5-like receptor kinase, PFAM = PF13947;PF07714)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben101scf00307_59433-65416' '(at1g18390 : 579.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66880.1); Has 128125 Blast hits to 126473 proteins in 4812 species: Archae - 110; Bacteria - 14433; Metazoa - 47787; Fungi - 10757; Plants - 35416; Viruses - 568; Other Eukaryotes - 19054 (source: NCBI BLink). & (gnl|cdd|36401 : 339.0) no description available & (q8l4h4|nork_medtr : 243.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 175.0) no description available & (reliability: 1158.0) & (original description: Putative LRK10L1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069;PF14380;PF13947)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben101scf00307_69402-74088' '(at1g25390 : 479.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18390.2); Has 125531 Blast hits to 123961 proteins in 4878 species: Archae - 118; Bacteria - 14377; Metazoa - 46593; Fungi - 10981; Plants - 34187; Viruses - 597; Other Eukaryotes - 18678 (source: NCBI BLink). & (gnl|cdd|36401 : 335.0) no description available & (q8l4h4|nork_medtr : 202.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 170.0) no description available & (reliability: 958.0) & (original description: Putative LRK10L1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069;PF14380)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben101scf00307_69817-73128' '(at1g25390 : 117.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18390.2); Has 125531 Blast hits to 123961 proteins in 4878 species: Archae - 118; Bacteria - 14377; Metazoa - 46593; Fungi - 10981; Plants - 34187; Viruses - 597; Other Eukaryotes - 18678 (source: NCBI BLink). & (gnl|cdd|36401 : 87.5) no description available & (reliability: 234.0) & (original description: Putative BnaC05g20690D, Description = Putative serine/threonine-protein kinase, PFAM = PF14380;PF07714)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben101scf00307_76837-80406' '(at1g25390 : 441.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18390.2); Has 125531 Blast hits to 123961 proteins in 4878 species: Archae - 118; Bacteria - 14377; Metazoa - 46593; Fungi - 10981; Plants - 34187; Viruses - 597; Other Eukaryotes - 18678 (source: NCBI BLink). & (gnl|cdd|36401 : 337.0) no description available & (q8lkz1|nork_pea : 208.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|29142 : 163.0) no description available & (reliability: 882.0) & (original description: Putative LRK10L1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben101scf00307_86210-91099' '(at1g25390 : 486.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18390.2); Has 125531 Blast hits to 123961 proteins in 4878 species: Archae - 118; Bacteria - 14377; Metazoa - 46593; Fungi - 10981; Plants - 34187; Viruses - 597; Other Eukaryotes - 18678 (source: NCBI BLink). & (gnl|cdd|36401 : 335.0) no description available & (q8l4h4|nork_medtr : 209.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 170.0) no description available & (reliability: 972.0) & (original description: Putative glysoja_048807, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben101scf00307_128035-131150' '(at1g70250 : 385.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 293.0) no description available & (p17801|kpro_maize : 197.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 166.0) no description available & (reliability: 746.0) & (original description: Putative Os04g0177000, Description = Os04g0177000 protein, PFAM = PF07714)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben101scf00428_689482-941809' '(at1g18390 : 541.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66880.1); Has 128125 Blast hits to 126473 proteins in 4812 species: Archae - 110; Bacteria - 14433; Metazoa - 47787; Fungi - 10757; Plants - 35416; Viruses - 568; Other Eukaryotes - 19054 (source: NCBI BLink). & (gnl|cdd|36401 : 347.0) no description available & (q8l4h4|nork_medtr : 216.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 180.0) no description available & (reliability: 1082.0) & (original description: Putative LRK10L1, Description = Putative serine/threonine-protein kinase, PFAM = PF13947;PF14380;PF00069)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben101scf00530_1123866-1147086' '(at5g38260 : 348.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 275.0) no description available & (p17801|kpro_maize : 192.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 170.0) no description available & (reliability: 696.0) & (original description: Putative L484_014044, Description = Putative receptor-like protein kinase, PFAM = PF00069;PF13947)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben101scf00530_1136856-1142994' '(at5g38260 : 365.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 291.0) no description available & (p17801|kpro_maize : 194.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 168.0) no description available & (reliability: 730.0) & (original description: Putative glysoja_028070, Description = Putative receptor-like protein kinase, PFAM = PF00069;PF13947;PF14380)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben101scf00898_168177-171975' '(at1g69910 : 632.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18390.2); Has 106258 Blast hits to 105319 proteins in 3703 species: Archae - 85; Bacteria - 12159; Metazoa - 38843; Fungi - 8194; Plants - 31841; Viruses - 323; Other Eukaryotes - 14813 (source: NCBI BLink). & (gnl|cdd|36401 : 316.0) no description available & (o24585|cri4_maize : 189.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 165.0) no description available & (reliability: 1264.0) & (original description: Putative WAKL14, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben101scf02290_196298-200378' '(at1g66920 : 321.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1). & (gnl|cdd|36401 : 289.0) no description available & (p17801|kpro_maize : 166.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 163.0) no description available & (reliability: 642.0) & (original description: Putative RKO_3, Description = Ser/Thr receptor-like kinase, putative, expressed, PFAM = PF00069;PF13947)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben101scf03363_229230-231818' '(gnl|cdd|36401 : 140.0) no description available & (at5g38280 : 119.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47549 : 105.0) no description available & (reliability: 226.0) & (original description: Putative PGSC0003DMG400004553, Description = Stress-induced receptor-like kinase, PFAM = PF07714)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben101scf04869_650988-655203' '(at5g38280 : 348.0) putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase; PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 299.0) no description available & (p17801|kpro_maize : 190.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 171.0) no description available & (reliability: 696.0) & (original description: Putative PGSC0003DMG400031485, Description = Stress-induced receptor-like kinase, PFAM = PF13947;PF00069)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben101scf04943_111751-116452' '(at1g25390 : 499.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18390.2); Has 125531 Blast hits to 123961 proteins in 4878 species: Archae - 118; Bacteria - 14377; Metazoa - 46593; Fungi - 10981; Plants - 34187; Viruses - 597; Other Eukaryotes - 18678 (source: NCBI BLink). & (gnl|cdd|36401 : 340.0) no description available & (q8lkz1|nork_pea : 216.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|29142 : 173.0) no description available & (reliability: 998.0) & (original description: Putative LRK10L1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069;PF14380)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben101scf04943_148975-158529' '(at5g38260 : 424.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 303.0) no description available & (p17801|kpro_maize : 205.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 163.0) no description available & (reliability: 848.0) & (original description: Putative Sb03g031700, Description = Putative uncharacterized protein Sb03g031700, PFAM = PF14380;PF13947;PF00069)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben101scf04943_232373-237340' '(at5g38260 : 363.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 312.0) no description available & (p17801|kpro_maize : 197.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 164.0) no description available & (reliability: 726.0) & (original description: Putative glysoja_021226, Description = Putative receptor-like protein kinase, PFAM = PF00069;PF14380)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben101scf05731_14519-116736' '(at1g70250 : 311.0) Encodes a Protease inhibitor/seed storage/LTP family protein; receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). & (gnl|cdd|36401 : 215.0) no description available & (p17801|kpro_maize : 147.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 119.0) no description available & (reliability: 594.0) & (original description: Putative glysoja_019068, Description = Putative receptor-like protein kinase, PFAM = PF00069)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben101scf06394_861041-890659' '(at5g38210 : 535.0) Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 351.0) no description available & (q8l4h4|nork_medtr : 219.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 181.0) no description available & (reliability: 1070.0) & (original description: Putative LRK10L1, Description = Putative serine/threonine-protein kinase, PFAM = PF13947;PF00069;PF14380)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben101scf06958_47022-50920' '(at1g69910 : 647.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18390.2); Has 106258 Blast hits to 105319 proteins in 3703 species: Archae - 85; Bacteria - 12159; Metazoa - 38843; Fungi - 8194; Plants - 31841; Viruses - 323; Other Eukaryotes - 14813 (source: NCBI BLink). & (gnl|cdd|36401 : 313.0) no description available & (o24585|cri4_maize : 187.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 165.0) no description available & (reliability: 1294.0) & (original description: Putative WAKL14, Description = Putative serine/threonine-protein kinase, PFAM = PF00069)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben101scf11071_254914-269561' '(at1g18390 : 536.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66880.1); Has 128125 Blast hits to 126473 proteins in 4812 species: Archae - 110; Bacteria - 14433; Metazoa - 47787; Fungi - 10757; Plants - 35416; Viruses - 568; Other Eukaryotes - 19054 (source: NCBI BLink). & (gnl|cdd|36401 : 349.0) no description available & (q8l4h4|nork_medtr : 209.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 183.0) no description available & (reliability: 1072.0) & (original description: Putative BnaC06g27850D, Description = BnaC06g27850D protein, PFAM = PF14380;PF00069;PF13947)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben101scf11071_269562-273711' '(at1g66910 : 382.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66930.1); Has 113951 Blast hits to 112305 proteins in 4393 species: Archae - 178; Bacteria - 12361; Metazoa - 42729; Fungi - 9627; Plants - 32494; Viruses - 324; Other Eukaryotes - 16238 (source: NCBI BLink). & (gnl|cdd|36401 : 298.0) no description available & (p17801|kpro_maize : 181.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 169.0) no description available & (reliability: 764.0) & (original description: Putative Sb03g006765, Description = Putative uncharacterized protein Sb03g006765, PFAM = PF14380;PF00069)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben101scf13018_13251-26056' '(at5g38210 : 530.0) Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 350.0) no description available & (q8l4h4|nork_medtr : 207.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 180.0) no description available & (reliability: 1060.0) & (original description: Putative LRK10L1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069;PF14380;PF13947)' T '30.2.20' 'signalling.receptor kinases.wheat LRK10 like' 'niben101scf21489_61566-66605' '(at1g25390 : 513.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18390.2); Has 125531 Blast hits to 123961 proteins in 4878 species: Archae - 118; Bacteria - 14377; Metazoa - 46593; Fungi - 10981; Plants - 34187; Viruses - 597; Other Eukaryotes - 18678 (source: NCBI BLink). & (gnl|cdd|36401 : 342.0) no description available & (q8lkz1|nork_pea : 216.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|29142 : 170.0) no description available & (reliability: 1026.0) & (original description: Putative LRK10L1, Description = Putative serine/threonine-protein kinase, PFAM = PF00069;PF14380)' T '30.2.21' 'signalling.receptor kinases.lysine motif' 'nbv0.3scaffold1720_59698-63517' '(gnl|cdd|36401 : 211.0) no description available & (at3g21630 : 184.0) LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane.; chitin elicitor receptor kinase 1 (CERK1); FUNCTIONS IN: transmembrane receptor protein kinase activity, receptor signaling protein activity, kinase activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to chitin, detection of molecule of fungal origin; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (TAIR:AT1G51940.1); Has 117788 Blast hits to 116484 proteins in 4898 species: Archae - 166; Bacteria - 13638; Metazoa - 43401; Fungi - 9900; Plants - 32885; Viruses - 579; Other Eukaryotes - 17219 (source: NCBI BLink). & (p17801|kpro_maize : 113.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 110.0) no description available & (reliability: 368.0) & (original description: Putative LYS15, Description = LysM type receptor kinase, PFAM = PF07714)' T '30.2.21' 'signalling.receptor kinases.lysine motif' 'nbv0.5scaffold610_176101-198633' '(at3g21630 : 668.0) LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane.; chitin elicitor receptor kinase 1 (CERK1); FUNCTIONS IN: transmembrane receptor protein kinase activity, receptor signaling protein activity, kinase activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to chitin, detection of molecule of fungal origin; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (TAIR:AT1G51940.1); Has 117788 Blast hits to 116484 proteins in 4898 species: Archae - 166; Bacteria - 13638; Metazoa - 43401; Fungi - 9900; Plants - 32885; Viruses - 579; Other Eukaryotes - 17219 (source: NCBI BLink). & (gnl|cdd|36401 : 318.0) no description available & (o24585|cri4_maize : 187.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 181.0) no description available & (reliability: 1336.0) & (original description: Putative lyk2, Description = Putative LysM domain containing receptor kinase, PFAM = PF01476;PF07714)' T '30.2.21' 'signalling.receptor kinases.lysine motif' 'nbv0.5scaffold2425_153956-173586' '(at3g21630 : 649.0) LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane.; chitin elicitor receptor kinase 1 (CERK1); FUNCTIONS IN: transmembrane receptor protein kinase activity, receptor signaling protein activity, kinase activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to chitin, detection of molecule of fungal origin; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (TAIR:AT1G51940.1); Has 117788 Blast hits to 116484 proteins in 4898 species: Archae - 166; Bacteria - 13638; Metazoa - 43401; Fungi - 9900; Plants - 32885; Viruses - 579; Other Eukaryotes - 17219 (source: NCBI BLink). & (gnl|cdd|36401 : 305.0) no description available & (o24585|cri4_maize : 179.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 169.0) no description available & (reliability: 1298.0) & (original description: Putative lyk1, Description = LysM type receptor kinase, PFAM = PF07714;PF01476)' T '30.2.21' 'signalling.receptor kinases.lysine motif' 'nbv0.5scaffold3852_91003-94811' '(at3g21630 : 205.0) LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane.; chitin elicitor receptor kinase 1 (CERK1); FUNCTIONS IN: transmembrane receptor protein kinase activity, receptor signaling protein activity, kinase activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to chitin, detection of molecule of fungal origin; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (TAIR:AT1G51940.1); Has 117788 Blast hits to 116484 proteins in 4898 species: Archae - 166; Bacteria - 13638; Metazoa - 43401; Fungi - 9900; Plants - 32885; Viruses - 579; Other Eukaryotes - 17219 (source: NCBI BLink). & (reliability: 410.0) & (original description: Putative lyk1, Description = Putative LysM domain containing receptor kinase, PFAM = )' T '30.2.21' 'signalling.receptor kinases.lysine motif' 'nbv0.5scaffold5108_87208-90607' '(gnl|cdd|36401 : 142.0) no description available & (at3g21630 : 117.0) LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane.; chitin elicitor receptor kinase 1 (CERK1); FUNCTIONS IN: transmembrane receptor protein kinase activity, receptor signaling protein activity, kinase activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to chitin, detection of molecule of fungal origin; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (TAIR:AT1G51940.1); Has 117788 Blast hits to 116484 proteins in 4898 species: Archae - 166; Bacteria - 13638; Metazoa - 43401; Fungi - 9900; Plants - 32885; Viruses - 579; Other Eukaryotes - 17219 (source: NCBI BLink). & (gnl|cdd|87344 : 80.6) no description available & (reliability: 234.0) & (original description: Putative LYS15, Description = Proline-rich receptor-like protein kinase PERK10, PFAM = PF07714)' T '30.2.21' 'signalling.receptor kinases.lysine motif' 'niben044scf00005934ctg000_5013-12058' '(at1g51940 : 792.0) protein kinase family protein / peptidoglycan-binding LysM domain-containing protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Peptidoglycan-binding Lysin subgroup (InterPro:IPR002482), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: chitin elicitor receptor kinase 1 (TAIR:AT3G21630.1); Has 117626 Blast hits to 116415 proteins in 4493 species: Archae - 110; Bacteria - 13527; Metazoa - 43649; Fungi - 10139; Plants - 32288; Viruses - 471; Other Eukaryotes - 17442 (source: NCBI BLink). & (gnl|cdd|36401 : 299.0) no description available & (q8lpb4|pskr_dauca : 192.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 176.0) no description available & (reliability: 1584.0) & (original description: Putative LYK3, Description = LysM domain receptor-like kinase 3, PFAM = PF00069)' T '30.2.21' 'signalling.receptor kinases.lysine motif' 'niben044scf00012728ctg004_1-6167' '(gnl|cdd|36401 : 284.0) no description available & (at2g33580 : 252.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, cell wall macromolecule catabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (TAIR:AT2G23770.1); Has 102109 Blast hits to 101070 proteins in 4036 species: Archae - 73; Bacteria - 10993; Metazoa - 38718; Fungi - 7726; Plants - 30221; Viruses - 349; Other Eukaryotes - 14029 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 162.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|84488 : 161.0) no description available & (reliability: 504.0) & (original description: Putative Os02g0681700, Description = Os02g0681700 protein, PFAM = PF00069;PF01476)' T '30.2.21' 'signalling.receptor kinases.lysine motif' 'niben044scf00013378ctg014_9047-12855' '(at3g21630 : 210.0) LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane.; chitin elicitor receptor kinase 1 (CERK1); FUNCTIONS IN: transmembrane receptor protein kinase activity, receptor signaling protein activity, kinase activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to chitin, detection of molecule of fungal origin; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (TAIR:AT1G51940.1); Has 117788 Blast hits to 116484 proteins in 4898 species: Archae - 166; Bacteria - 13638; Metazoa - 43401; Fungi - 9900; Plants - 32885; Viruses - 579; Other Eukaryotes - 17219 (source: NCBI BLink). & (reliability: 420.0) & (original description: Putative lyk2, Description = LysM domain-containing receptor-like kinase 4 family protein, PFAM = )' T '30.2.21' 'signalling.receptor kinases.lysine motif' 'niben044scf00037790ctg008_1-5061' '(at3g21630 : 194.0) LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane.; chitin elicitor receptor kinase 1 (CERK1); FUNCTIONS IN: transmembrane receptor protein kinase activity, receptor signaling protein activity, kinase activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to chitin, detection of molecule of fungal origin; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (TAIR:AT1G51940.1); Has 117788 Blast hits to 116484 proteins in 4898 species: Archae - 166; Bacteria - 13638; Metazoa - 43401; Fungi - 9900; Plants - 32885; Viruses - 579; Other Eukaryotes - 17219 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative lyk1, Description = Putative LysM domain containing receptor kinase, PFAM = PF01476)' T '30.2.21' 'signalling.receptor kinases.lysine motif' 'niben101scf00415_11346-16898' '(gnl|cdd|36401 : 283.0) no description available & (at2g33580 : 244.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, cell wall macromolecule catabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (TAIR:AT2G23770.1); Has 102109 Blast hits to 101070 proteins in 4036 species: Archae - 73; Bacteria - 10993; Metazoa - 38718; Fungi - 7726; Plants - 30221; Viruses - 349; Other Eukaryotes - 14029 (source: NCBI BLink). & (p17801|kpro_maize : 166.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 162.0) no description available & (reliability: 488.0) & (original description: Putative Os02g0681700, Description = Os02g0681700 protein, PFAM = PF01476;PF00069)' T '30.2.21' 'signalling.receptor kinases.lysine motif' 'niben101scf01037_454187-463310' '(at3g21630 : 671.0) LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane.; chitin elicitor receptor kinase 1 (CERK1); FUNCTIONS IN: transmembrane receptor protein kinase activity, receptor signaling protein activity, kinase activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to chitin, detection of molecule of fungal origin; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (TAIR:AT1G51940.1); Has 117788 Blast hits to 116484 proteins in 4898 species: Archae - 166; Bacteria - 13638; Metazoa - 43401; Fungi - 9900; Plants - 32885; Viruses - 579; Other Eukaryotes - 17219 (source: NCBI BLink). & (gnl|cdd|36401 : 317.0) no description available & (o24585|cri4_maize : 187.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 180.0) no description available & (reliability: 1342.0) & (original description: Putative lyk2, Description = Putative LysM domain containing receptor kinase, PFAM = PF01476;PF01476;PF07714)' T '30.2.21' 'signalling.receptor kinases.lysine motif' 'niben101scf01189_68305-72152' '(at2g23770 : 324.0) protein kinase family protein / peptidoglycan-binding LysM domain-containing protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: stem, leaf whorl, root, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Immunoglobulin-like (InterPro:IPR007110), Protein kinase, catalytic domain (InterPro:IPR000719), Peptidoglycan-binding Lysin subgroup (InterPro:IPR002482), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G33580.1); Has 93408 Blast hits to 92552 proteins in 3130 species: Archae - 75; Bacteria - 9623; Metazoa - 34895; Fungi - 6839; Plants - 28747; Viruses - 328; Other Eukaryotes - 12901 (source: NCBI BLink). & (gnl|cdd|36401 : 234.0) no description available & (gnl|cdd|87344 : 142.0) no description available & (q8lpb4|pskr_dauca : 130.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 648.0) & (original description: Putative LYR3, Description = Lysin motif receptor-like kinase 3, PFAM = PF01476;PF07714)' T '30.2.21' 'signalling.receptor kinases.lysine motif' 'niben101scf02145_464314-478192' '(at3g21630 : 641.0) LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane.; chitin elicitor receptor kinase 1 (CERK1); FUNCTIONS IN: transmembrane receptor protein kinase activity, receptor signaling protein activity, kinase activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to chitin, detection of molecule of fungal origin; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (TAIR:AT1G51940.1); Has 117788 Blast hits to 116484 proteins in 4898 species: Archae - 166; Bacteria - 13638; Metazoa - 43401; Fungi - 9900; Plants - 32885; Viruses - 579; Other Eukaryotes - 17219 (source: NCBI BLink). & (gnl|cdd|36401 : 322.0) no description available & (o24585|cri4_maize : 193.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 178.0) no description available & (reliability: 1282.0) & (original description: Putative lyk2, Description = Putative LysM domain containing receptor kinase, PFAM = PF07714)' T '30.2.21' 'signalling.receptor kinases.lysine motif' 'niben101scf02145_491121-497213' '(at3g21630 : 624.0) LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane.; chitin elicitor receptor kinase 1 (CERK1); FUNCTIONS IN: transmembrane receptor protein kinase activity, receptor signaling protein activity, kinase activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to chitin, detection of molecule of fungal origin; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (TAIR:AT1G51940.1); Has 117788 Blast hits to 116484 proteins in 4898 species: Archae - 166; Bacteria - 13638; Metazoa - 43401; Fungi - 9900; Plants - 32885; Viruses - 579; Other Eukaryotes - 17219 (source: NCBI BLink). & (gnl|cdd|36401 : 306.0) no description available & (o24585|cri4_maize : 182.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 173.0) no description available & (reliability: 1248.0) & (original description: Putative lyk1, Description = LysM type receptor kinase, PFAM = PF07714;PF01476)' T '30.2.21' 'signalling.receptor kinases.lysine motif' 'niben101scf02172_575766-580326' '(at1g51940 : 365.0) protein kinase family protein / peptidoglycan-binding LysM domain-containing protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Peptidoglycan-binding Lysin subgroup (InterPro:IPR002482), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: chitin elicitor receptor kinase 1 (TAIR:AT3G21630.1); Has 117626 Blast hits to 116415 proteins in 4493 species: Archae - 110; Bacteria - 13527; Metazoa - 43649; Fungi - 10139; Plants - 32288; Viruses - 471; Other Eukaryotes - 17442 (source: NCBI BLink). & (gnl|cdd|36401 : 297.0) no description available & (q8lpb4|pskr_dauca : 190.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 175.0) no description available & (reliability: 730.0) & (original description: Putative LYS3, Description = LysM type receptor kinase, PFAM = PF01476;PF00069)' T '30.2.21' 'signalling.receptor kinases.lysine motif' 'niben101scf02215_584766-588595' '(gnl|cdd|36401 : 212.0) no description available & (at2g33580 : 209.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, cell wall macromolecule catabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (TAIR:AT2G23770.1); Has 102109 Blast hits to 101070 proteins in 4036 species: Archae - 73; Bacteria - 10993; Metazoa - 38718; Fungi - 7726; Plants - 30221; Viruses - 349; Other Eukaryotes - 14029 (source: NCBI BLink). & (p17801|kpro_maize : 117.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 110.0) no description available & (reliability: 418.0) & (original description: Putative NFP, Description = Serine/threonine receptor-like kinase NFP, PFAM = PF00069)' T '30.2.21' 'signalling.receptor kinases.lysine motif' 'niben101scf02953_125937-132138' '(at3g21630 : 624.0) LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane.; chitin elicitor receptor kinase 1 (CERK1); FUNCTIONS IN: transmembrane receptor protein kinase activity, receptor signaling protein activity, kinase activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to chitin, detection of molecule of fungal origin; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (TAIR:AT1G51940.1); Has 117788 Blast hits to 116484 proteins in 4898 species: Archae - 166; Bacteria - 13638; Metazoa - 43401; Fungi - 9900; Plants - 32885; Viruses - 579; Other Eukaryotes - 17219 (source: NCBI BLink). & (gnl|cdd|36401 : 305.0) no description available & (o24585|cri4_maize : 185.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 173.0) no description available & (reliability: 1248.0) & (original description: Putative lyk2, Description = Putative LysM domain containing receptor kinase, PFAM = PF07714;PF01476)' T '30.2.21' 'signalling.receptor kinases.lysine motif' 'niben101scf07013_100119-123488' '(at3g21630 : 652.0) LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane.; chitin elicitor receptor kinase 1 (CERK1); FUNCTIONS IN: transmembrane receptor protein kinase activity, receptor signaling protein activity, kinase activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to chitin, detection of molecule of fungal origin; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (TAIR:AT1G51940.1); Has 117788 Blast hits to 116484 proteins in 4898 species: Archae - 166; Bacteria - 13638; Metazoa - 43401; Fungi - 9900; Plants - 32885; Viruses - 579; Other Eukaryotes - 17219 (source: NCBI BLink). & (gnl|cdd|36401 : 305.0) no description available & (o24585|cri4_maize : 181.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 170.0) no description available & (reliability: 1304.0) & (original description: Putative lyk2, Description = Putative LysM domain containing receptor kinase, PFAM = PF07714;PF01476)' T '30.2.21' 'signalling.receptor kinases.lysine motif' 'niben101scf07688_146173-150074' '(gnl|cdd|36401 : 211.0) no description available & (at3g21630 : 186.0) LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane.; chitin elicitor receptor kinase 1 (CERK1); FUNCTIONS IN: transmembrane receptor protein kinase activity, receptor signaling protein activity, kinase activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to chitin, detection of molecule of fungal origin; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (TAIR:AT1G51940.1); Has 117788 Blast hits to 116484 proteins in 4898 species: Archae - 166; Bacteria - 13638; Metazoa - 43401; Fungi - 9900; Plants - 32885; Viruses - 579; Other Eukaryotes - 17219 (source: NCBI BLink). & (p17801|kpro_maize : 112.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 111.0) no description available & (reliability: 372.0) & (original description: Putative LYS15, Description = LysM type receptor kinase, PFAM = PF07714)' T '30.2.21' 'signalling.receptor kinases.lysine motif' 'niben101scf07688_146481-149880' '(gnl|cdd|36401 : 142.0) no description available & (at3g21630 : 117.0) LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane.; chitin elicitor receptor kinase 1 (CERK1); FUNCTIONS IN: transmembrane receptor protein kinase activity, receptor signaling protein activity, kinase activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to chitin, detection of molecule of fungal origin; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (TAIR:AT1G51940.1); Has 117788 Blast hits to 116484 proteins in 4898 species: Archae - 166; Bacteria - 13638; Metazoa - 43401; Fungi - 9900; Plants - 32885; Viruses - 579; Other Eukaryotes - 17219 (source: NCBI BLink). & (gnl|cdd|87344 : 80.6) no description available & (reliability: 234.0) & (original description: Putative LYS15, Description = Proline-rich receptor-like protein kinase PERK10, PFAM = PF07714)' T '30.2.21' 'signalling.receptor kinases.lysine motif' 'niben101scf09604_163111-166966' '(at2g23770 : 474.0) protein kinase family protein / peptidoglycan-binding LysM domain-containing protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: stem, leaf whorl, root, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Immunoglobulin-like (InterPro:IPR007110), Protein kinase, catalytic domain (InterPro:IPR000719), Peptidoglycan-binding Lysin subgroup (InterPro:IPR002482), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G33580.1); Has 93408 Blast hits to 92552 proteins in 3130 species: Archae - 75; Bacteria - 9623; Metazoa - 34895; Fungi - 6839; Plants - 28747; Viruses - 328; Other Eukaryotes - 12901 (source: NCBI BLink). & (gnl|cdd|36401 : 257.0) no description available & (q8l4h4|nork_medtr : 160.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 152.0) no description available & (reliability: 948.0) & (original description: Putative LYK4, Description = LysM domain receptor-like kinase 4, PFAM = PF01476;PF07714)' T '30.2.21' 'signalling.receptor kinases.lysine motif' 'niben101scf10650_141633-149196' '(at1g51940 : 798.0) protein kinase family protein / peptidoglycan-binding LysM domain-containing protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Peptidoglycan-binding Lysin subgroup (InterPro:IPR002482), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: chitin elicitor receptor kinase 1 (TAIR:AT3G21630.1); Has 117626 Blast hits to 116415 proteins in 4493 species: Archae - 110; Bacteria - 13527; Metazoa - 43649; Fungi - 10139; Plants - 32288; Viruses - 471; Other Eukaryotes - 17442 (source: NCBI BLink). & (gnl|cdd|36401 : 298.0) no description available & (q8lpb4|pskr_dauca : 192.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 178.0) no description available & (reliability: 1596.0) & (original description: Putative LYK3, Description = LysM domain receptor-like kinase 3, PFAM = PF07714;PF01476)' T '30.2.21' 'signalling.receptor kinases.lysine motif' 'niben101scf15156_153181-159695' '(at3g21630 : 190.0) LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane.; chitin elicitor receptor kinase 1 (CERK1); FUNCTIONS IN: transmembrane receptor protein kinase activity, receptor signaling protein activity, kinase activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to chitin, detection of molecule of fungal origin; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (TAIR:AT1G51940.1); Has 117788 Blast hits to 116484 proteins in 4898 species: Archae - 166; Bacteria - 13638; Metazoa - 43401; Fungi - 9900; Plants - 32885; Viruses - 579; Other Eukaryotes - 17219 (source: NCBI BLink). & (reliability: 380.0) & (original description: Putative nfr1c, Description = Proline-rich receptor-like protein kinase PERK8, PFAM = )' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'nbv0.3scaffold352_126087-131728' '(gnl|cdd|36401 : 167.0) no description available & (at1g24030 : 117.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 120365 Blast hits to 119013 proteins in 4490 species: Archae - 114; Bacteria - 14164; Metazoa - 43937; Fungi - 10244; Plants - 33641; Viruses - 447; Other Eukaryotes - 17818 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 103.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 86.0) no description available & (reliability: 216.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF07714;PF00069)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'nbv0.3scaffold4725_1-14567' '(at3g24550 : 420.0) encodes an ortholog of Brassica napus proline extensin-like receptor kinase. Expression of the brassica gene is induced by wounding and fungal infection.; proline extensin-like receptor kinase 1 (PERK1); FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to fungus, response to wounding; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: roline-rich extensin-like receptor kinase 4 (TAIR:AT2G18470.1); Has 334655 Blast hits to 210931 proteins in 5790 species: Archae - 702; Bacteria - 55907; Metazoa - 123975; Fungi - 45755; Plants - 52676; Viruses - 6745; Other Eukaryotes - 48895 (source: NCBI BLink). & (gnl|cdd|36401 : 384.0) no description available & (q8l4h4|nork_medtr : 218.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 161.0) no description available & (reliability: 840.0) & (original description: Putative BnaA01g04270D, Description = BnaA01g04270D protein, PFAM = PF00069)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'nbv0.3scaffold20552_5937-11057' '(at2g18470 : 488.0) Proline-rich extensin-like receptor kinase 4. Functions at an early stage of ABA signalling inhibiting primary root cell elongation by perturbing Ca2+ homeostasis.; roline-rich extensin-like receptor kinase 4 (PERK4); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: proline extensin-like receptor kinase 1 (TAIR:AT3G24550.1); Has 204492 Blast hits to 156803 proteins in 5113 species: Archae - 274; Bacteria - 30506; Metazoa - 74357; Fungi - 20978; Plants - 40817; Viruses - 2896; Other Eukaryotes - 34664 (source: NCBI BLink). & (gnl|cdd|36401 : 399.0) no description available & (q8lpb4|pskr_dauca : 247.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 179.0) no description available & (reliability: 976.0) & (original description: Putative PERK4, Description = Proline-rich receptor-like protein kinase PERK4, PFAM = PF07714)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'nbv0.3scaffold21492_24309-31730' '(gnl|cdd|36401 : 145.0) no description available & (at1g11050 : 116.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor-like kinase in in flowers 3 (TAIR:AT2G48010.1); Has 115297 Blast hits to 114175 proteins in 4324 species: Archae - 104; Bacteria - 13350; Metazoa - 42303; Fungi - 9816; Plants - 32853; Viruses - 335; Other Eukaryotes - 16536 (source: NCBI BLink). & (gnl|cdd|29142 : 107.0) no description available & (o24585|cri4_maize : 89.7) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 210.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF00069)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'nbv0.3scaffold36925_10755-20566' '(at1g68690 : 525.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: proline-rich extensin-like receptor kinase 10 (TAIR:AT1G26150.1); Has 570812 Blast hits to 252659 proteins in 6239 species: Archae - 1199; Bacteria - 114498; Metazoa - 211977; Fungi - 79751; Plants - 80044; Viruses - 11567; Other Eukaryotes - 71776 (source: NCBI BLink). & (gnl|cdd|36401 : 416.0) no description available & (q8lpb4|pskr_dauca : 256.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 186.0) no description available & (reliability: 1050.0) & (original description: Putative Sb03g008430, Description = Putative uncharacterized protein Sb03g008430, PFAM = PF00069)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'nbv0.3scaffold54345_1-8635' '(at4g32710 : 422.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: proline extensin-like receptor kinase 1 (TAIR:AT3G24550.1); Has 121602 Blast hits to 120272 proteins in 4520 species: Archae - 116; Bacteria - 14308; Metazoa - 44161; Fungi - 10677; Plants - 33872; Viruses - 404; Other Eukaryotes - 18064 (source: NCBI BLink). & (gnl|cdd|36401 : 385.0) no description available & (q8lpb4|pskr_dauca : 221.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 162.0) no description available & (reliability: 844.0) & (original description: Putative PERK1, Description = Proline-rich receptor-like protein kinase PERK4, PFAM = PF00069)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'nbv0.5scaffold276_203588-211024' '(at5g38560 : 402.0) Protein kinase superfamily protein; FUNCTIONS IN: structural constituent of cell wall, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Pistil-specific extensin-like protein (InterPro:IPR003882), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G68690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 370.0) no description available & (q8lpb4|pskr_dauca : 243.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 178.0) no description available & (reliability: 804.0) & (original description: Putative IGI1, Description = Proline-rich receptor-like protein kinase PERK9, PFAM = PF00069)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'nbv0.5scaffold1245_136655-146373' '(at3g24550 : 424.0) encodes an ortholog of Brassica napus proline extensin-like receptor kinase. Expression of the brassica gene is induced by wounding and fungal infection.; proline extensin-like receptor kinase 1 (PERK1); FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to fungus, response to wounding; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: roline-rich extensin-like receptor kinase 4 (TAIR:AT2G18470.1); Has 334655 Blast hits to 210931 proteins in 5790 species: Archae - 702; Bacteria - 55907; Metazoa - 123975; Fungi - 45755; Plants - 52676; Viruses - 6745; Other Eukaryotes - 48895 (source: NCBI BLink). & (gnl|cdd|36401 : 384.0) no description available & (q8l4h4|nork_medtr : 218.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 160.0) no description available & (reliability: 848.0) & (original description: Putative BnaA01g04270D, Description = BnaA01g04270D protein, PFAM = PF00069)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'nbv0.5scaffold1568_22082-127425' '(at2g18470 : 488.0) Proline-rich extensin-like receptor kinase 4. Functions at an early stage of ABA signalling inhibiting primary root cell elongation by perturbing Ca2+ homeostasis.; roline-rich extensin-like receptor kinase 4 (PERK4); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: proline extensin-like receptor kinase 1 (TAIR:AT3G24550.1); Has 204492 Blast hits to 156803 proteins in 5113 species: Archae - 274; Bacteria - 30506; Metazoa - 74357; Fungi - 20978; Plants - 40817; Viruses - 2896; Other Eukaryotes - 34664 (source: NCBI BLink). & (gnl|cdd|36401 : 398.0) no description available & (q8lpb4|pskr_dauca : 247.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 180.0) no description available & (reliability: 976.0) & (original description: Putative PERK4, Description = Proline-rich receptor-like protein kinase PERK4, PFAM = PF07714)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben044scf00003034ctg018_11120-18015' '(at1g68690 : 580.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: proline-rich extensin-like receptor kinase 10 (TAIR:AT1G26150.1); Has 570812 Blast hits to 252659 proteins in 6239 species: Archae - 1199; Bacteria - 114498; Metazoa - 211977; Fungi - 79751; Plants - 80044; Viruses - 11567; Other Eukaryotes - 71776 (source: NCBI BLink). & (gnl|cdd|36401 : 430.0) no description available & (q8lpb4|pskr_dauca : 269.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 183.0) no description available & (reliability: 1160.0) & (original description: Putative PERK13, Description = Proline-rich receptor-like protein kinase PERK13, PFAM = PF00069)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben044scf00004644ctg001_12477-18290' '(at5g38560 : 403.0) Protein kinase superfamily protein; FUNCTIONS IN: structural constituent of cell wall, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Pistil-specific extensin-like protein (InterPro:IPR003882), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G68690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 373.0) no description available & (q8lpb4|pskr_dauca : 243.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 187.0) no description available & (reliability: 806.0) & (original description: Putative IGI1, Description = Proline-rich receptor-like protein kinase PERK9, PFAM = PF00069)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben044scf00005698ctg028_1888-7707' '(gnl|cdd|36401 : 167.0) no description available & (at1g24030 : 117.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 120365 Blast hits to 119013 proteins in 4490 species: Archae - 114; Bacteria - 14164; Metazoa - 43937; Fungi - 10244; Plants - 33641; Viruses - 447; Other Eukaryotes - 17818 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 105.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47550 : 87.6) no description available & (reliability: 212.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF07714;PF00069)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben044scf00011545ctg006_38359-48904' '(at3g24550 : 527.0) encodes an ortholog of Brassica napus proline extensin-like receptor kinase. Expression of the brassica gene is induced by wounding and fungal infection.; proline extensin-like receptor kinase 1 (PERK1); FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to fungus, response to wounding; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: roline-rich extensin-like receptor kinase 4 (TAIR:AT2G18470.1); Has 334655 Blast hits to 210931 proteins in 5790 species: Archae - 702; Bacteria - 55907; Metazoa - 123975; Fungi - 45755; Plants - 52676; Viruses - 6745; Other Eukaryotes - 48895 (source: NCBI BLink). & (gnl|cdd|36401 : 411.0) no description available & (q8lpb4|pskr_dauca : 240.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 177.0) no description available & (reliability: 1054.0) & (original description: Putative PERK1, Description = Proline-rich receptor-like protein kinase PERK4, PFAM = PF07714)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben044scf00019210ctg018_4082-11092' '(at2g18470 : 494.0) Proline-rich extensin-like receptor kinase 4. Functions at an early stage of ABA signalling inhibiting primary root cell elongation by perturbing Ca2+ homeostasis.; roline-rich extensin-like receptor kinase 4 (PERK4); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: proline extensin-like receptor kinase 1 (TAIR:AT3G24550.1); Has 204492 Blast hits to 156803 proteins in 5113 species: Archae - 274; Bacteria - 30506; Metazoa - 74357; Fungi - 20978; Plants - 40817; Viruses - 2896; Other Eukaryotes - 34664 (source: NCBI BLink). & (gnl|cdd|36401 : 393.0) no description available & (q8lpb4|pskr_dauca : 261.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 175.0) no description available & (reliability: 988.0) & (original description: Putative BnaA07g36160D, Description = BnaA07g36160D protein, PFAM = PF07204;PF07714)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben044scf00027220ctg002_925-8055' '(at3g13690 : 751.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT1G55200.1); Has 113730 Blast hits to 112457 proteins in 4634 species: Archae - 101; Bacteria - 13731; Metazoa - 41958; Fungi - 9110; Plants - 32440; Viruses - 341; Other Eukaryotes - 16049 (source: NCBI BLink). & (gnl|cdd|36401 : 391.0) no description available & (q8lkz1|nork_pea : 231.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 160.0) no description available & (reliability: 1502.0) & (original description: Putative BnaA03g32990D, Description = BnaA03g32990D protein, PFAM = PF07714)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben044scf00027220ctg002_1460-5402' '(at1g55200 : 248.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT3G13690.1); Has 111250 Blast hits to 110104 proteins in 4418 species: Archae - 103; Bacteria - 13376; Metazoa - 40845; Fungi - 8892; Plants - 32313; Viruses - 311; Other Eukaryotes - 15410 (source: NCBI BLink). & (gnl|cdd|36401 : 197.0) no description available & (q8lkz1|nork_pea : 127.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|84488 : 98.0) no description available & (reliability: 496.0) & (original description: Putative Dsk1, Description = Inactive protein kinase, PFAM = PF00069)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben044scf00055094ctg003_1-2447' '(gnl|cdd|36401 : 195.0) no description available & (at1g79620 : 134.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G49760.1); Has 173131 Blast hits to 132948 proteins in 4769 species: Archae - 163; Bacteria - 18653; Metazoa - 51943; Fungi - 10632; Plants - 70309; Viruses - 438; Other Eukaryotes - 20993 (source: NCBI BLink). & (q8l4h4|nork_medtr : 117.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 109.0) no description available & (reliability: 246.0) & (original description: Putative At3g26700, Description = Putative leucine-rich repeat receptor-like protein kinase, PFAM = PF07714)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben101scf00177_911277-919523' '(gnl|cdd|36401 : 267.0) no description available & (at5g40380 : 194.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (CRK42); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (TAIR:AT1G70530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29142 : 172.0) no description available & (o24585|cri4_maize : 158.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 372.0) & (original description: Putative Sb08g000610, Description = Putative uncharacterized protein Sb08g000610, PFAM = PF00069)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben101scf00465_192219-199434' '(at1g68690 : 550.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: proline-rich extensin-like receptor kinase 10 (TAIR:AT1G26150.1); Has 570812 Blast hits to 252659 proteins in 6239 species: Archae - 1199; Bacteria - 114498; Metazoa - 211977; Fungi - 79751; Plants - 80044; Viruses - 11567; Other Eukaryotes - 71776 (source: NCBI BLink). & (gnl|cdd|36401 : 434.0) no description available & (q8lpb4|pskr_dauca : 271.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 184.0) no description available & (reliability: 1100.0) & (original description: Putative PERK13, Description = Proline-rich receptor-like protein kinase PERK13, PFAM = PF00069)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben101scf01267_145981-153042' '(at3g24550 : 644.0) encodes an ortholog of Brassica napus proline extensin-like receptor kinase. Expression of the brassica gene is induced by wounding and fungal infection.; proline extensin-like receptor kinase 1 (PERK1); FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to fungus, response to wounding; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: roline-rich extensin-like receptor kinase 4 (TAIR:AT2G18470.1); Has 334655 Blast hits to 210931 proteins in 5790 species: Archae - 702; Bacteria - 55907; Metazoa - 123975; Fungi - 45755; Plants - 52676; Viruses - 6745; Other Eukaryotes - 48895 (source: NCBI BLink). & (gnl|cdd|36401 : 434.0) no description available & (q8lpb4|pskr_dauca : 251.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 176.0) no description available & (reliability: 1288.0) & (original description: Putative PERK5, Description = Proline-rich receptor-like protein kinase PERK5, PFAM = PF07714)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben101scf02322_271386-277828' '(at3g13690 : 496.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT1G55200.1); Has 113730 Blast hits to 112457 proteins in 4634 species: Archae - 101; Bacteria - 13731; Metazoa - 41958; Fungi - 9110; Plants - 32440; Viruses - 341; Other Eukaryotes - 16049 (source: NCBI BLink). & (gnl|cdd|36401 : 312.0) no description available & (q8lpb4|pskr_dauca : 183.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 151.0) no description available & (reliability: 992.0) & (original description: Putative Dsk1, Description = Dual-specific kinase DSK1, PFAM = PF07714)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben101scf02354_498507-540397' '(at4g32710 : 423.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: proline extensin-like receptor kinase 1 (TAIR:AT3G24550.1); Has 121602 Blast hits to 120272 proteins in 4520 species: Archae - 116; Bacteria - 14308; Metazoa - 44161; Fungi - 10677; Plants - 33872; Viruses - 404; Other Eukaryotes - 18064 (source: NCBI BLink). & (gnl|cdd|36401 : 387.0) no description available & (q8lpb4|pskr_dauca : 221.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 163.0) no description available & (reliability: 846.0) & (original description: Putative BnaA01g04270D, Description = BnaA01g04270D protein, PFAM = PF00069)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben101scf02366_104799-116659' '(at2g18470 : 390.0) Proline-rich extensin-like receptor kinase 4. Functions at an early stage of ABA signalling inhibiting primary root cell elongation by perturbing Ca2+ homeostasis.; roline-rich extensin-like receptor kinase 4 (PERK4); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: proline extensin-like receptor kinase 1 (TAIR:AT3G24550.1); Has 204492 Blast hits to 156803 proteins in 5113 species: Archae - 274; Bacteria - 30506; Metazoa - 74357; Fungi - 20978; Plants - 40817; Viruses - 2896; Other Eukaryotes - 34664 (source: NCBI BLink). & (gnl|cdd|36401 : 369.0) no description available & (q8lpb4|pskr_dauca : 254.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 181.0) no description available & (reliability: 780.0) & (original description: Putative IGI1, Description = Proline-rich receptor-like protein kinase PERK4, PFAM = PF07714)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben101scf02563_416567-423917' '(at2g18470 : 527.0) Proline-rich extensin-like receptor kinase 4. Functions at an early stage of ABA signalling inhibiting primary root cell elongation by perturbing Ca2+ homeostasis.; roline-rich extensin-like receptor kinase 4 (PERK4); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: proline extensin-like receptor kinase 1 (TAIR:AT3G24550.1); Has 204492 Blast hits to 156803 proteins in 5113 species: Archae - 274; Bacteria - 30506; Metazoa - 74357; Fungi - 20978; Plants - 40817; Viruses - 2896; Other Eukaryotes - 34664 (source: NCBI BLink). & (gnl|cdd|36401 : 418.0) no description available & (q8lpb4|pskr_dauca : 256.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 182.0) no description available & (reliability: 1054.0) & (original description: Putative BnaA09g30960D, Description = BnaA09g30960D protein, PFAM = PF07714)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben101scf02997_217075-222128' '(at3g13690 : 610.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT1G55200.1); Has 113730 Blast hits to 112457 proteins in 4634 species: Archae - 101; Bacteria - 13731; Metazoa - 41958; Fungi - 9110; Plants - 32440; Viruses - 341; Other Eukaryotes - 16049 (source: NCBI BLink). & (gnl|cdd|36401 : 373.0) no description available & (q8lkz1|nork_pea : 233.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 143.0) no description available & (reliability: 1220.0) & (original description: Putative At3g13690, Description = AT3G13690 protein, PFAM = PF00069)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben101scf03778_256082-262104' '(at3g13690 : 1001.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT1G55200.1); Has 113730 Blast hits to 112457 proteins in 4634 species: Archae - 101; Bacteria - 13731; Metazoa - 41958; Fungi - 9110; Plants - 32440; Viruses - 341; Other Eukaryotes - 16049 (source: NCBI BLink). & (gnl|cdd|36401 : 392.0) no description available & (q8lkz1|nork_pea : 240.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 165.0) no description available & (reliability: 2002.0) & (original description: Putative Dsk1, Description = Dual-specific kinase DSK1, PFAM = PF00069)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben101scf04145_35882-41463' '(at3g24550 : 525.0) encodes an ortholog of Brassica napus proline extensin-like receptor kinase. Expression of the brassica gene is induced by wounding and fungal infection.; proline extensin-like receptor kinase 1 (PERK1); FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to fungus, response to wounding; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: roline-rich extensin-like receptor kinase 4 (TAIR:AT2G18470.1); Has 334655 Blast hits to 210931 proteins in 5790 species: Archae - 702; Bacteria - 55907; Metazoa - 123975; Fungi - 45755; Plants - 52676; Viruses - 6745; Other Eukaryotes - 48895 (source: NCBI BLink). & (gnl|cdd|36401 : 412.0) no description available & (q8lpb4|pskr_dauca : 255.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 178.0) no description available & (reliability: 1050.0) & (original description: Putative Os03g0226901, Description = Os03g0226901 protein, PFAM = PF07714)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben101scf04778_178274-185287' '(at2g18470 : 494.0) Proline-rich extensin-like receptor kinase 4. Functions at an early stage of ABA signalling inhibiting primary root cell elongation by perturbing Ca2+ homeostasis.; roline-rich extensin-like receptor kinase 4 (PERK4); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: proline extensin-like receptor kinase 1 (TAIR:AT3G24550.1); Has 204492 Blast hits to 156803 proteins in 5113 species: Archae - 274; Bacteria - 30506; Metazoa - 74357; Fungi - 20978; Plants - 40817; Viruses - 2896; Other Eukaryotes - 34664 (source: NCBI BLink). & (gnl|cdd|36401 : 392.0) no description available & (q8lpb4|pskr_dauca : 264.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 177.0) no description available & (reliability: 988.0) & (original description: Putative Sb01g027400, Description = Putative uncharacterized protein Sb01g027400, PFAM = PF07204;PF07714)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben101scf04889_131089-145618' '(at3g13690 : 679.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT1G55200.1); Has 113730 Blast hits to 112457 proteins in 4634 species: Archae - 101; Bacteria - 13731; Metazoa - 41958; Fungi - 9110; Plants - 32440; Viruses - 341; Other Eukaryotes - 16049 (source: NCBI BLink). & (gnl|cdd|36401 : 336.0) no description available & (q8lpb4|pskr_dauca : 203.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 154.0) no description available & (reliability: 1358.0) & (original description: Putative BnaA03g32990D, Description = BnaA03g32990D protein, PFAM = PF07714)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben101scf04889_131960-145610' '(at3g13690 : 689.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT1G55200.1); Has 113730 Blast hits to 112457 proteins in 4634 species: Archae - 101; Bacteria - 13731; Metazoa - 41958; Fungi - 9110; Plants - 32440; Viruses - 341; Other Eukaryotes - 16049 (source: NCBI BLink). & (gnl|cdd|36401 : 392.0) no description available & (q8lkz1|nork_pea : 232.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 158.0) no description available & (reliability: 1378.0) & (original description: Putative Dsk1, Description = Inactive protein kinase, PFAM = PF07714)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben101scf05078_622846-632154' '(at1g68690 : 550.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: proline-rich extensin-like receptor kinase 10 (TAIR:AT1G26150.1); Has 570812 Blast hits to 252659 proteins in 6239 species: Archae - 1199; Bacteria - 114498; Metazoa - 211977; Fungi - 79751; Plants - 80044; Viruses - 11567; Other Eukaryotes - 71776 (source: NCBI BLink). & (gnl|cdd|36401 : 423.0) no description available & (q8lpb4|pskr_dauca : 254.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47550 : 173.0) no description available & (reliability: 1100.0) & (original description: Putative BnaA09g30960D, Description = BnaA09g30960D protein, PFAM = PF00069)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben101scf05610_256931-264397' '(at2g18470 : 467.0) Proline-rich extensin-like receptor kinase 4. Functions at an early stage of ABA signalling inhibiting primary root cell elongation by perturbing Ca2+ homeostasis.; roline-rich extensin-like receptor kinase 4 (PERK4); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: proline extensin-like receptor kinase 1 (TAIR:AT3G24550.1); Has 204492 Blast hits to 156803 proteins in 5113 species: Archae - 274; Bacteria - 30506; Metazoa - 74357; Fungi - 20978; Plants - 40817; Viruses - 2896; Other Eukaryotes - 34664 (source: NCBI BLink). & (gnl|cdd|36401 : 396.0) no description available & (q8lpb4|pskr_dauca : 235.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 181.0) no description available & (reliability: 934.0) & (original description: Putative PERK5, Description = Proline-rich receptor-like protein kinase PERK5, PFAM = PF07714)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben101scf05678_208426-216626' '(at5g38560 : 604.0) Protein kinase superfamily protein; FUNCTIONS IN: structural constituent of cell wall, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Pistil-specific extensin-like protein (InterPro:IPR003882), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G68690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 437.0) no description available & (q8lpb4|pskr_dauca : 275.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 179.0) no description available & (reliability: 1208.0) & (original description: Putative Sb03g008430, Description = Putative uncharacterized protein Sb03g008430, PFAM = PF00069)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben101scf07008_133372-146927' '(at3g24550 : 535.0) encodes an ortholog of Brassica napus proline extensin-like receptor kinase. Expression of the brassica gene is induced by wounding and fungal infection.; proline extensin-like receptor kinase 1 (PERK1); FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to fungus, response to wounding; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: roline-rich extensin-like receptor kinase 4 (TAIR:AT2G18470.1); Has 334655 Blast hits to 210931 proteins in 5790 species: Archae - 702; Bacteria - 55907; Metazoa - 123975; Fungi - 45755; Plants - 52676; Viruses - 6745; Other Eukaryotes - 48895 (source: NCBI BLink). & (gnl|cdd|36401 : 416.0) no description available & (q8lpb4|pskr_dauca : 243.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 178.0) no description available & (reliability: 1070.0) & (original description: Putative Sb09g007240, Description = Putative uncharacterized protein Sb09g007240, PFAM = PF07714)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben101scf07606_61146-68254' '(at2g18470 : 468.0) Proline-rich extensin-like receptor kinase 4. Functions at an early stage of ABA signalling inhibiting primary root cell elongation by perturbing Ca2+ homeostasis.; roline-rich extensin-like receptor kinase 4 (PERK4); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: proline extensin-like receptor kinase 1 (TAIR:AT3G24550.1); Has 204492 Blast hits to 156803 proteins in 5113 species: Archae - 274; Bacteria - 30506; Metazoa - 74357; Fungi - 20978; Plants - 40817; Viruses - 2896; Other Eukaryotes - 34664 (source: NCBI BLink). & (gnl|cdd|36401 : 390.0) no description available & (q8lpb4|pskr_dauca : 241.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 174.0) no description available & (reliability: 936.0) & (original description: Putative PERK1, Description = Proline-rich receptor-like protein kinase PERK4, PFAM = PF07714)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben101scf08127_1173854-1183848' '(at1g68690 : 525.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: proline-rich extensin-like receptor kinase 10 (TAIR:AT1G26150.1); Has 570812 Blast hits to 252659 proteins in 6239 species: Archae - 1199; Bacteria - 114498; Metazoa - 211977; Fungi - 79751; Plants - 80044; Viruses - 11567; Other Eukaryotes - 71776 (source: NCBI BLink). & (gnl|cdd|36401 : 416.0) no description available & (q8lpb4|pskr_dauca : 256.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 187.0) no description available & (reliability: 1050.0) & (original description: Putative Sb03g008430, Description = Putative uncharacterized protein Sb03g008430, PFAM = PF00069)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben101scf08151_129372-139348' '(at3g24550 : 583.0) encodes an ortholog of Brassica napus proline extensin-like receptor kinase. Expression of the brassica gene is induced by wounding and fungal infection.; proline extensin-like receptor kinase 1 (PERK1); FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to fungus, response to wounding; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: roline-rich extensin-like receptor kinase 4 (TAIR:AT2G18470.1); Has 334655 Blast hits to 210931 proteins in 5790 species: Archae - 702; Bacteria - 55907; Metazoa - 123975; Fungi - 45755; Plants - 52676; Viruses - 6745; Other Eukaryotes - 48895 (source: NCBI BLink). & (gnl|cdd|36401 : 432.0) no description available & (q8lpb4|pskr_dauca : 253.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 176.0) no description available & (reliability: 1166.0) & (original description: Putative PERK1, Description = Proline-rich receptor-like protein kinase PERK1, PFAM = PF07714)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben101scf09544_115761-133063' '(at1g55200 : 353.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT3G13690.1); Has 111250 Blast hits to 110104 proteins in 4418 species: Archae - 103; Bacteria - 13376; Metazoa - 40845; Fungi - 8892; Plants - 32313; Viruses - 311; Other Eukaryotes - 15410 (source: NCBI BLink). & (gnl|cdd|36401 : 340.0) no description available & (q8l4h4|nork_medtr : 209.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|88314 : 145.0) no description available & (reliability: 706.0) & (original description: Putative Sb03g041780, Description = Putative uncharacterized protein Sb03g041780, PFAM = PF00069)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben101scf10556_77243-86063' '(gnl|cdd|36401 : 308.0) no description available & (at3g13690 : 288.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT1G55200.1); Has 113730 Blast hits to 112457 proteins in 4634 species: Archae - 101; Bacteria - 13731; Metazoa - 41958; Fungi - 9110; Plants - 32440; Viruses - 341; Other Eukaryotes - 16049 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 206.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 176.0) no description available & (reliability: 576.0) & (original description: Putative PERK3, Description = Inactive protein kinase, PFAM = PF07714)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben101scf11232_135749-144359' '(at5g38560 : 460.0) Protein kinase superfamily protein; FUNCTIONS IN: structural constituent of cell wall, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Pistil-specific extensin-like protein (InterPro:IPR003882), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G68690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 326.0) no description available & (q8lpb4|pskr_dauca : 210.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 133.0) no description available & (reliability: 920.0) & (original description: Putative IGI1, Description = Proline-rich receptor-like protein kinase PERK9, PFAM = PF07714)' T '30.2.22' 'signalling.receptor kinases.proline extensin like' 'niben101scf12134_23667-28757' '(at2g18470 : 488.0) Proline-rich extensin-like receptor kinase 4. Functions at an early stage of ABA signalling inhibiting primary root cell elongation by perturbing Ca2+ homeostasis.; roline-rich extensin-like receptor kinase 4 (PERK4); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: proline extensin-like receptor kinase 1 (TAIR:AT3G24550.1); Has 204492 Blast hits to 156803 proteins in 5113 species: Archae - 274; Bacteria - 30506; Metazoa - 74357; Fungi - 20978; Plants - 40817; Viruses - 2896; Other Eukaryotes - 34664 (source: NCBI BLink). & (gnl|cdd|36401 : 400.0) no description available & (q8lpb4|pskr_dauca : 247.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 183.0) no description available & (reliability: 976.0) & (original description: Putative PERK7, Description = Proline-rich receptor-like protein kinase PERK7, PFAM = PF07714)' T '30.2.23' 'signalling.receptor kinases.RKF3 like' 'nbv0.3scaffold21492_24309-31730' '(gnl|cdd|36401 : 145.0) no description available & (at1g11050 : 116.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor-like kinase in in flowers 3 (TAIR:AT2G48010.1); Has 115297 Blast hits to 114175 proteins in 4324 species: Archae - 104; Bacteria - 13350; Metazoa - 42303; Fungi - 9816; Plants - 32853; Viruses - 335; Other Eukaryotes - 16536 (source: NCBI BLink). & (gnl|cdd|29142 : 107.0) no description available & (o24585|cri4_maize : 89.7) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 232.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF00069)' T '30.2.23' 'signalling.receptor kinases.RKF3 like' 'nbv0.3scaffold46699_10086-13948' '(at1g11050 : 565.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor-like kinase in in flowers 3 (TAIR:AT2G48010.1); Has 115297 Blast hits to 114175 proteins in 4324 species: Archae - 104; Bacteria - 13350; Metazoa - 42303; Fungi - 9816; Plants - 32853; Viruses - 335; Other Eukaryotes - 16536 (source: NCBI BLink). & (gnl|cdd|36401 : 333.0) no description available & (q8l4h4|nork_medtr : 216.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 161.0) no description available & (reliability: 1130.0) & (original description: Putative At1g11050, Description = Probable receptor-like protein kinase At1g11050, PFAM = PF00069)' T '30.2.23' 'signalling.receptor kinases.RKF3 like' 'nbv0.5scaffold2887_134839-138779' '(at2g48010 : 666.0) receptor-like serine/threonine kinase (RKF3); receptor-like kinase in in flowers 3 (RKF3); FUNCTIONS IN: receptor signaling protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G11050.1); Has 112833 Blast hits to 111726 proteins in 4356 species: Archae - 97; Bacteria - 12546; Metazoa - 41926; Fungi - 9138; Plants - 32648; Viruses - 383; Other Eukaryotes - 16095 (source: NCBI BLink). & (gnl|cdd|36401 : 354.0) no description available & (q8l4h4|nork_medtr : 211.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 160.0) no description available & (reliability: 1332.0) & (original description: Putative RKF3, Description = Probable LRR receptor-like serine/threonine-protein kinase RKF3, PFAM = PF00069)' T '30.2.23' 'signalling.receptor kinases.RKF3 like' 'niben101scf00177_911277-919523' '(gnl|cdd|36401 : 267.0) no description available & (at5g40380 : 194.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (CRK42); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (TAIR:AT1G70530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29142 : 172.0) no description available & (o24585|cri4_maize : 158.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 368.0) & (original description: Putative Sb08g000610, Description = Putative uncharacterized protein Sb08g000610, PFAM = PF00069)' T '30.2.23' 'signalling.receptor kinases.RKF3 like' 'niben101scf00430_175917-179779' '(at1g11050 : 551.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor-like kinase in in flowers 3 (TAIR:AT2G48010.1); Has 115297 Blast hits to 114175 proteins in 4324 species: Archae - 104; Bacteria - 13350; Metazoa - 42303; Fungi - 9816; Plants - 32853; Viruses - 335; Other Eukaryotes - 16536 (source: NCBI BLink). & (gnl|cdd|36401 : 334.0) no description available & (q8l4h4|nork_medtr : 215.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 161.0) no description available & (reliability: 1102.0) & (original description: Putative At1g11050, Description = Probable receptor-like protein kinase At1g11050, PFAM = PF00069)' T '30.2.23' 'signalling.receptor kinases.RKF3 like' 'niben101scf02122_171735-175672' '(at1g11050 : 785.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor-like kinase in in flowers 3 (TAIR:AT2G48010.1); Has 115297 Blast hits to 114175 proteins in 4324 species: Archae - 104; Bacteria - 13350; Metazoa - 42303; Fungi - 9816; Plants - 32853; Viruses - 335; Other Eukaryotes - 16536 (source: NCBI BLink). & (gnl|cdd|36401 : 342.0) no description available & (q8l4h4|nork_medtr : 200.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 165.0) no description available & (reliability: 1570.0) & (original description: Putative At1g11050, Description = Probable receptor-like protein kinase At1g11050, PFAM = PF00069)' T '30.2.23' 'signalling.receptor kinases.RKF3 like' 'niben101scf03468_323831-327768' '(at1g11050 : 781.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor-like kinase in in flowers 3 (TAIR:AT2G48010.1); Has 115297 Blast hits to 114175 proteins in 4324 species: Archae - 104; Bacteria - 13350; Metazoa - 42303; Fungi - 9816; Plants - 32853; Viruses - 335; Other Eukaryotes - 16536 (source: NCBI BLink). & (gnl|cdd|36401 : 340.0) no description available & (q8l4h4|nork_medtr : 202.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 164.0) no description available & (reliability: 1562.0) & (original description: Putative At1g11050, Description = Probable receptor-like protein kinase At1g11050, PFAM = PF00069)' T '30.2.23' 'signalling.receptor kinases.RKF3 like' 'niben101scf03534_51831-55923' '(gnl|cdd|36401 : 273.0) no description available & (at4g02010 : 199.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G20300.1); Has 117558 Blast hits to 116281 proteins in 4412 species: Archae - 107; Bacteria - 13740; Metazoa - 43399; Fungi - 9953; Plants - 33036; Viruses - 373; Other Eukaryotes - 16950 (source: NCBI BLink). & (q8l4h4|nork_medtr : 191.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47550 : 155.0) no description available & (reliability: 380.0) & (original description: Putative pto, Description = Putative receptor-like protein kinase, PFAM = PF00069)' T '30.2.23' 'signalling.receptor kinases.RKF3 like' 'niben101scf05301_473028-476959' '(at2g48010 : 759.0) receptor-like serine/threonine kinase (RKF3); receptor-like kinase in in flowers 3 (RKF3); FUNCTIONS IN: receptor signaling protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G11050.1); Has 112833 Blast hits to 111726 proteins in 4356 species: Archae - 97; Bacteria - 12546; Metazoa - 41926; Fungi - 9138; Plants - 32648; Viruses - 383; Other Eukaryotes - 16095 (source: NCBI BLink). & (gnl|cdd|36401 : 356.0) no description available & (q8l4h4|nork_medtr : 211.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 161.0) no description available & (reliability: 1518.0) & (original description: Putative RKF3, Description = Probable LRR receptor-like serine/threonine-protein kinase RKF3, PFAM = PF00069)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'nbv0.3scaffold2434_32073-37735' '(at5g24080 : 668.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 332.0) no description available & (p17801|kpro_maize : 320.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 165.0) no description available & (reliability: 1336.0) & (original description: Putative At5g24080, Description = G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080, PFAM = PF00954;PF01453;PF00069)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'nbv0.3scaffold26763_14390-20562' '(at3g16030 : 220.0) CALLUS EXPRESSION OF RBCS 101 (CES101); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT4G21390.1); Has 121576 Blast hits to 119500 proteins in 4422 species: Archae - 101; Bacteria - 13477; Metazoa - 44302; Fungi - 10440; Plants - 35232; Viruses - 450; Other Eukaryotes - 17574 (source: NCBI BLink). & (gnl|cdd|36401 : 189.0) no description available & (p07761|slsg6_braol : 137.0) S-locus-specific glycoprotein S6 precursor (SLSG-6) - Brassica oleracea (Wild cabbage) & (gnl|cdd|47549 : 109.0) no description available & (reliability: 408.0) & (original description: Putative At1g67520, Description = Serine/threonine-protein kinase PBS1, putative, PFAM = PF08276;PF07714;PF01453)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'nbv0.3scaffold28537_12653-15222' '(at4g27300 : 151.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT4G27290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 92.9) no description available & (reliability: 302.0) & (original description: Putative SRK, Description = Serine/threonine-protein kinase, PFAM = PF07714)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'nbv0.3scaffold32600_17450-23494' '(at4g21380 : 599.0) encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels.; receptor kinase 3 (RK3); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), S-locus, receptor kinase (InterPro:IPR022126); BEST Arabidopsis thaliana protein match is: receptor kinase 2 (TAIR:AT1G65800.1); Has 120297 Blast hits to 118488 proteins in 4631 species: Archae - 97; Bacteria - 13304; Metazoa - 44101; Fungi - 10092; Plants - 34714; Viruses - 410; Other Eukaryotes - 17579 (source: NCBI BLink). & (gnl|cdd|36401 : 329.0) no description available & (q8lkz1|nork_pea : 209.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 178.0) no description available & (reliability: 1198.0) & (original description: Putative srk29, Description = Serine/threonine-protein kinase, PFAM = PF08276;PF12398;PF07714;PF11883)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'nbv0.3scaffold41991_15746-18499' '(at4g27290 : 176.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor kinase 3 (TAIR:AT4G21380.1); Has 125077 Blast hits to 123040 proteins in 4681 species: Archae - 101; Bacteria - 14188; Metazoa - 45583; Fungi - 10059; Plants - 36201; Viruses - 449; Other Eukaryotes - 18496 (source: NCBI BLink). & (p17840|slsg3_braol : 113.0) S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage) & (gnl|cdd|71710 : 83.8) no description available & (reliability: 352.0) & (original description: Putative At4g27290, Description = Serine/threonine-protein kinase, PFAM = PF08276)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'nbv0.3scaffold56814_4251-12873' '(at3g16030 : 356.0) CALLUS EXPRESSION OF RBCS 101 (CES101); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT4G21390.1); Has 121576 Blast hits to 119500 proteins in 4422 species: Archae - 101; Bacteria - 13477; Metazoa - 44302; Fungi - 10440; Plants - 35232; Viruses - 450; Other Eukaryotes - 17574 (source: NCBI BLink). & (gnl|cdd|36401 : 314.0) no description available & (gnl|cdd|47913 : 231.0) no description available & (q8l4h4|nork_medtr : 207.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 702.0) & (original description: Putative Chrk1, Description = Receptor-like kinase CHRK1, PFAM = PF00704;PF07714)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'nbv0.3scaffold60426_2342-7453' '(at4g27290 : 862.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor kinase 3 (TAIR:AT4G21380.1); Has 125077 Blast hits to 123040 proteins in 4681 species: Archae - 101; Bacteria - 14188; Metazoa - 45583; Fungi - 10059; Plants - 36201; Viruses - 449; Other Eukaryotes - 18496 (source: NCBI BLink). & (gnl|cdd|36401 : 315.0) no description available & (p17840|slsg3_braol : 314.0) S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage) & (gnl|cdd|47549 : 177.0) no description available & (reliability: 1724.0) & (original description: Putative PGSC0003DMG401004946, Description = Serine/threonine-protein kinase, PFAM = PF00954;PF07714;PF01453;PF08276;PF11883)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'nbv0.3scaffold71341_426-8261' '(at4g23180 : 115.0) Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307); cysteine-rich RLK (RECEPTOR-like protein kinase) 10 (CRK10); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (TAIR:AT4G23160.1); Has 124145 Blast hits to 122467 proteins in 4564 species: Archae - 110; Bacteria - 14159; Metazoa - 45299; Fungi - 10862; Plants - 34986; Viruses - 473; Other Eukaryotes - 18256 (source: NCBI BLink). & (gnl|cdd|36401 : 91.3) no description available & (reliability: 228.0) & (original description: Putative SRK, Description = Serine/threonine-protein kinase, PFAM = PF07714)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'nbv0.3scaffold71341_2450-8320' '(at4g27290 : 832.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor kinase 3 (TAIR:AT4G21380.1); Has 125077 Blast hits to 123040 proteins in 4681 species: Archae - 101; Bacteria - 14188; Metazoa - 45583; Fungi - 10059; Plants - 36201; Viruses - 449; Other Eukaryotes - 18496 (source: NCBI BLink). & (p17840|slsg3_braol : 336.0) S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage) & (gnl|cdd|36401 : 319.0) no description available & (gnl|cdd|47549 : 179.0) no description available & (reliability: 1664.0) & (original description: Putative PGSC0003DMG400019241, Description = Serine/threonine-protein kinase, PFAM = PF00069;PF00954;PF01453;PF11883;PF08276)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'nbv0.5scaffold292_34169-39162' '(at4g03230 : 383.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G11340.1); Has 120947 Blast hits to 117758 proteins in 4568 species: Archae - 89; Bacteria - 13334; Metazoa - 43594; Fungi - 9240; Plants - 36995; Viruses - 386; Other Eukaryotes - 17309 (source: NCBI BLink). & (gnl|cdd|36401 : 297.0) no description available & (q8lpb4|pskr_dauca : 188.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|87344 : 169.0) no description available & (reliability: 716.0) & (original description: Putative rlk1, Description = Serine/threonine-protein kinase, PFAM = PF07714)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'nbv0.5scaffold683_355029-360483' '(at1g65800 : 629.0) encodes a putative receptor-like serine/threonine protein kinases that is similar to brassica self-incompatibility (S) locus. expressed in specifically in cotyledons, leaves, and sepals, in correlation with the maturation of these structures.; receptor kinase 2 (RK2); CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Protein kinase, ATP binding site (InterPro:IPR017441), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), S-locus, receptor kinase (InterPro:IPR022126), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor kinase 1 (TAIR:AT1G65790.1); Has 122202 Blast hits to 120473 proteins in 4562 species: Archae - 111; Bacteria - 13838; Metazoa - 44423; Fungi - 10348; Plants - 34995; Viruses - 424; Other Eukaryotes - 18063 (source: NCBI BLink). & (gnl|cdd|36401 : 320.0) no description available & (p07761|slsg6_braol : 307.0) S-locus-specific glycoprotein S6 precursor (SLSG-6) - Brassica oleracea (Wild cabbage) & (gnl|cdd|47549 : 179.0) no description available & (reliability: 1258.0) & (original description: Putative NbSGLP, Description = S locus glycoprotein like protein, PFAM = PF00069;PF08276;PF01453;PF00954;PF11883)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'nbv0.5scaffold696_602974-606864' '(at5g60900 : 341.0) Encodes a receptor-like protein kinase.; receptor-like protein kinase 1 (RLK1); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: lectin protein kinase family protein (TAIR:AT1G34300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 295.0) no description available & (p17801|kpro_maize : 192.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 141.0) no description available & (reliability: 616.0) & (original description: Putative glysoja_022454, Description = Serine/threonine-protein kinase, PFAM = PF00954;PF07714;PF01453)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'nbv0.5scaffold1949_233585-300586' '(at4g27290 : 128.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor kinase 3 (TAIR:AT4G21380.1); Has 125077 Blast hits to 123040 proteins in 4681 species: Archae - 101; Bacteria - 14188; Metazoa - 45583; Fungi - 10059; Plants - 36201; Viruses - 449; Other Eukaryotes - 18496 (source: NCBI BLink). & (gnl|cdd|36401 : 91.3) no description available & (reliability: 256.0) & (original description: Putative SRK, Description = Serine/threonine-protein kinase, PFAM = PF07714)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'nbv0.5scaffold1949_380407-386373' '(at4g27290 : 831.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor kinase 3 (TAIR:AT4G21380.1); Has 125077 Blast hits to 123040 proteins in 4681 species: Archae - 101; Bacteria - 14188; Metazoa - 45583; Fungi - 10059; Plants - 36201; Viruses - 449; Other Eukaryotes - 18496 (source: NCBI BLink). & (p17840|slsg3_braol : 344.0) S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage) & (gnl|cdd|36401 : 316.0) no description available & (gnl|cdd|47549 : 184.0) no description available & (reliability: 1662.0) & (original description: Putative SRK, Description = S-locus receptor kinase, PFAM = PF07714;PF08276;PF00954;PF01453;PF11883)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'nbv0.5scaffold5431_4107-10457' '(at4g21390 : 435.0) B120; FUNCTIONS IN: protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61610.1); Has 119638 Blast hits to 117946 proteins in 4361 species: Archae - 104; Bacteria - 13356; Metazoa - 43759; Fungi - 9937; Plants - 34742; Viruses - 415; Other Eukaryotes - 17325 (source: NCBI BLink). & (gnl|cdd|36401 : 285.0) no description available & (q8lkz1|nork_pea : 193.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 172.0) no description available & (reliability: 870.0) & (original description: Putative PGSC0003DMG400001059, Description = Cysteine-rich RLK (Receptor-like kinase) protein, PFAM = PF08276;PF01453;PF07714)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben044scf00002424ctg003_1162-6958' '(at1g61390 : 720.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: carbohydrate binding, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; CONTAINS InterPro DOMAIN/s: Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-1 29 (TAIR:AT1G61380.1); Has 121755 Blast hits to 120061 proteins in 4542 species: Archae - 112; Bacteria - 13453; Metazoa - 45372; Fungi - 9712; Plants - 35005; Viruses - 409; Other Eukaryotes - 17692 (source: NCBI BLink). & (gnl|cdd|36401 : 309.0) no description available & (p07761|slsg6_braol : 291.0) S-locus-specific glycoprotein S6 precursor (SLSG-6) - Brassica oleracea (Wild cabbage) & (gnl|cdd|47549 : 165.0) no description available & (reliability: 1440.0) & (original description: Putative At1g61390, Description = G-type lectin S-receptor-like serine/threonine-protein kinase At1g61390, PFAM = PF00954;PF01453;PF08276;PF07714)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben044scf00002927ctg008_1925-8541' '(p51614|chit3_vitvi : 394.0) Acidic endochitinase precursor (EC 3.2.1.14) - Vitis vinifera (Grape) & (at5g24090 : 393.0) Chitinase A (class III) expressed exclusively under environmental stress conditions.; chitinase A (CHIA); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to salt stress, response to cold, cellular response to water deprivation, response to wounding, response to light intensity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, chitinase active site (InterPro:IPR001579), Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39899 : 334.0) no description available & (gnl|cdd|47549 : 169.0) no description available & (reliability: 732.0) & (original description: Putative CHIB1, Description = Acidic endochitinase, PFAM = PF07714;PF00704)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben044scf00007694ctg019_1-2011' '(at4g27300 : 194.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT4G27290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 122.0) no description available & (reliability: 388.0) & (original description: Putative SRK, Description = Serine/threonine-protein kinase, PFAM = PF07714)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben044scf00007871ctg017_1-4274' '(at1g34300 : 892.0) lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 120498 Blast hits to 118775 proteins in 4615 species: Archae - 117; Bacteria - 12995; Metazoa - 44949; Fungi - 10067; Plants - 34445; Viruses - 432; Other Eukaryotes - 17493 (source: NCBI BLink). & (gnl|cdd|36401 : 327.0) no description available & (p17801|kpro_maize : 257.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 172.0) no description available & (reliability: 1784.0) & (original description: Putative At1g34300, Description = G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300, PFAM = PF00954;PF01453;PF00069)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben044scf00016727ctg013_20850-26468' '(at4g27290 : 709.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor kinase 3 (TAIR:AT4G21380.1); Has 125077 Blast hits to 123040 proteins in 4681 species: Archae - 101; Bacteria - 14188; Metazoa - 45583; Fungi - 10059; Plants - 36201; Viruses - 449; Other Eukaryotes - 18496 (source: NCBI BLink). & (p07761|slsg6_braol : 306.0) S-locus-specific glycoprotein S6 precursor (SLSG-6) - Brassica oleracea (Wild cabbage) & (gnl|cdd|36401 : 305.0) no description available & (gnl|cdd|47549 : 174.0) no description available & (reliability: 1418.0) & (original description: Putative NbSGLP, Description = S locus glycoprotein like protein, PFAM = PF00954;PF08276;PF01453;PF00069)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben044scf00030850ctg002_7816-13754' '(at4g27290 : 503.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor kinase 3 (TAIR:AT4G21380.1); Has 125077 Blast hits to 123040 proteins in 4681 species: Archae - 101; Bacteria - 14188; Metazoa - 45583; Fungi - 10059; Plants - 36201; Viruses - 449; Other Eukaryotes - 18496 (source: NCBI BLink). & (gnl|cdd|36401 : 319.0) no description available & (q8lkz1|nork_pea : 209.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|29142 : 177.0) no description available & (reliability: 1006.0) & (original description: Putative PGSC0003DMG400044943, Description = Serine/threonine-protein kinase, PFAM = PF00954;PF08276;PF00069)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben044scf00032216ctg010_5136-9574' '(at1g11330 : 384.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-1 13 (TAIR:AT1G11350.1). & (gnl|cdd|36401 : 302.0) no description available & (q8lkz1|nork_pea : 192.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 166.0) no description available & (reliability: 762.0) & (original description: Putative SRK, Description = Serine/threonine-protein kinase, PFAM = PF00069;PF11883)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben044scf00036050ctg002_11224-12764' '(p17840|slsg3_braol : 101.0) S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage) & (at4g21380 : 97.1) encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels.; receptor kinase 3 (RK3); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), S-locus, receptor kinase (InterPro:IPR022126); BEST Arabidopsis thaliana protein match is: receptor kinase 2 (TAIR:AT1G65800.1); Has 120297 Blast hits to 118488 proteins in 4631 species: Archae - 97; Bacteria - 13304; Metazoa - 44101; Fungi - 10092; Plants - 34714; Viruses - 410; Other Eukaryotes - 17579 (source: NCBI BLink). & (gnl|cdd|47452 : 80.0) no description available & (reliability: 194.2) & (original description: Putative PGSC0003DMG402013876, Description = Serine/threonine-protein kinase, PFAM = PF01453)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben044scf00036050ctg005_206-5564' '(at1g11340 : 838.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), EGF-like, type 3 (InterPro:IPR000742), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G11410.1); Has 123060 Blast hits to 121063 proteins in 4656 species: Archae - 122; Bacteria - 13729; Metazoa - 45275; Fungi - 10148; Plants - 35343; Viruses - 433; Other Eukaryotes - 18010 (source: NCBI BLink). & (gnl|cdd|36401 : 336.0) no description available & (p17840|slsg3_braol : 323.0) S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage) & (gnl|cdd|47549 : 182.0) no description available & (reliability: 1656.0) & (original description: Putative RKS1, Description = G-type lectin S-receptor-like serine/threonine-protein kinase RKS1, PFAM = PF00954;PF01453;PF08276;PF07714)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben044scf00049539ctg002_406-6473' '(at4g27290 : 845.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor kinase 3 (TAIR:AT4G21380.1); Has 125077 Blast hits to 123040 proteins in 4681 species: Archae - 101; Bacteria - 14188; Metazoa - 45583; Fungi - 10059; Plants - 36201; Viruses - 449; Other Eukaryotes - 18496 (source: NCBI BLink). & (p17840|slsg3_braol : 346.0) S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage) & (gnl|cdd|36401 : 318.0) no description available & (gnl|cdd|47549 : 186.0) no description available & (reliability: 1690.0) & (original description: Putative SRK, Description = S-locus receptor kinase, PFAM = PF07714;PF00954;PF01453;PF08276;PF11883)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf00177_911277-919523' '(gnl|cdd|36401 : 267.0) no description available & (at5g40380 : 194.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (CRK42); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (TAIR:AT1G70530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29142 : 172.0) no description available & (o24585|cri4_maize : 158.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 350.0) & (original description: Putative Sb08g000610, Description = Putative uncharacterized protein Sb08g000610, PFAM = PF00069)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf00213_120710-125052' '(at5g60900 : 376.0) Encodes a receptor-like protein kinase.; receptor-like protein kinase 1 (RLK1); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: lectin protein kinase family protein (TAIR:AT1G34300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 323.0) no description available & (p17801|kpro_maize : 318.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 187.0) no description available & (reliability: 692.0) & (original description: Putative Sb03g046880, Description = Serine/threonine-protein kinase, PFAM = PF00954;PF00069;PF01453)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf00560_1161430-1167026' '(at4g21390 : 863.0) B120; FUNCTIONS IN: protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61610.1); Has 119638 Blast hits to 117946 proteins in 4361 species: Archae - 104; Bacteria - 13356; Metazoa - 43759; Fungi - 9937; Plants - 34742; Viruses - 415; Other Eukaryotes - 17325 (source: NCBI BLink). & (gnl|cdd|36401 : 332.0) no description available & (p17840|slsg3_braol : 263.0) S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage) & (gnl|cdd|47549 : 175.0) no description available & (reliability: 1726.0) & (original description: Putative B120, Description = G-type lectin S-receptor-like serine/threonine-protein kinase B120, PFAM = PF01453;PF00954;PF08276;PF07714)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf00927_1378571-1383689' '(at1g11330 : 776.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-1 13 (TAIR:AT1G11350.1). & (gnl|cdd|36401 : 320.0) no description available & (p17801|kpro_maize : 273.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 174.0) no description available & (reliability: 1450.0) & (original description: Putative At1g11330, Description = G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330, PFAM = PF01453;PF08276;PF00954;PF07714)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf01232_74534-80196' '(at5g24080 : 668.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 332.0) no description available & (p17801|kpro_maize : 311.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 164.0) no description available & (reliability: 1336.0) & (original description: Putative At5g24080, Description = G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080, PFAM = PF00069;PF01453;PF00954)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf01555_212572-217212' '(p17801|kpro_maize : 572.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (at4g00340 : 342.0) Encodes a receptor-like protein kinase that is expressed in roots.; receptor-like protein kinase 4 (RLK4); FUNCTIONS IN: sugar binding, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 118915 Blast hits to 117390 proteins in 4385 species: Archae - 97; Bacteria - 13085; Metazoa - 43904; Fungi - 9417; Plants - 35014; Viruses - 433; Other Eukaryotes - 16965 (source: NCBI BLink). & (gnl|cdd|36401 : 299.0) no description available & (gnl|cdd|84488 : 165.0) no description available & (reliability: 638.0) & (original description: Putative PGSC0003DMG400003313, Description = Serine/threonine-protein kinase, PFAM = PF00954;PF01453;PF00069)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf01685_342315-347455' '(at4g21380 : 629.0) encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels.; receptor kinase 3 (RK3); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), S-locus, receptor kinase (InterPro:IPR022126); BEST Arabidopsis thaliana protein match is: receptor kinase 2 (TAIR:AT1G65800.1); Has 120297 Blast hits to 118488 proteins in 4631 species: Archae - 97; Bacteria - 13304; Metazoa - 44101; Fungi - 10092; Plants - 34714; Viruses - 410; Other Eukaryotes - 17579 (source: NCBI BLink). & (gnl|cdd|36401 : 322.0) no description available & (p07761|slsg6_braol : 253.0) S-locus-specific glycoprotein S6 precursor (SLSG-6) - Brassica oleracea (Wild cabbage) & (gnl|cdd|47549 : 171.0) no description available & (reliability: 1258.0) & (original description: Putative At4g03230, Description = G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230, PFAM = PF07714;PF08276;PF01453;PF00954)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf01696_722339-726711' '(at1g34300 : 363.0) lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 120498 Blast hits to 118775 proteins in 4615 species: Archae - 117; Bacteria - 12995; Metazoa - 44949; Fungi - 10067; Plants - 34445; Viruses - 432; Other Eukaryotes - 17493 (source: NCBI BLink). & (p17801|kpro_maize : 330.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|36401 : 316.0) no description available & (gnl|cdd|84488 : 169.0) no description available & (reliability: 726.0) & (original description: Putative Os10g0101000, Description = Serine/threonine-protein kinase, PFAM = PF01453;PF00069;PF00954)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf01735_276586-281096' '(at1g34300 : 880.0) lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 120498 Blast hits to 118775 proteins in 4615 species: Archae - 117; Bacteria - 12995; Metazoa - 44949; Fungi - 10067; Plants - 34445; Viruses - 432; Other Eukaryotes - 17493 (source: NCBI BLink). & (p17801|kpro_maize : 327.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|36401 : 325.0) no description available & (gnl|cdd|87344 : 170.0) no description available & (reliability: 1760.0) & (original description: Putative At1g34300, Description = G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300, PFAM = PF00069;PF00954;PF01453)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf01826_524171-526704' '(at4g03230 : 154.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G11340.1); Has 120947 Blast hits to 117758 proteins in 4568 species: Archae - 89; Bacteria - 13334; Metazoa - 43594; Fungi - 9240; Plants - 36995; Viruses - 386; Other Eukaryotes - 17309 (source: NCBI BLink). & (gnl|cdd|36401 : 101.0) no description available & (reliability: 300.0) & (original description: Putative IRK1, Description = Serine/threonine-protein kinase, PFAM = PF07714;PF11883)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf02305_61976-133856' '(at1g11300 : 1588.0) protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;kinases;carbohydrate binding; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G11330.2); Has 247442 Blast hits to 123826 proteins in 4585 species: Archae - 216; Bacteria - 26920; Metazoa - 91063; Fungi - 20518; Plants - 70734; Viruses - 831; Other Eukaryotes - 37160 (source: NCBI BLink). & (gnl|cdd|36401 : 346.0) no description available & (p17840|slsg3_braol : 254.0) S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage) & (gnl|cdd|47549 : 184.0) no description available & (reliability: 3176.0) & (original description: Putative B120, Description = Serine/threonine-protein kinase, PFAM = PF01453;PF01453;PF07714;PF07714;PF11883;PF11883;PF08276;PF08276;PF00954;PF00954)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf02305_62048-67002' '(at1g11330 : 807.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-1 13 (TAIR:AT1G11350.1). & (gnl|cdd|36401 : 344.0) no description available & (p17801|kpro_maize : 233.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 185.0) no description available & (reliability: 1590.0) & (original description: Putative BnaA09g47660D, Description = BnaA09g47660D protein, PFAM = PF01453;PF07714;PF00954;PF00954;PF08276;PF11883)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf02366_329954-336154' '(at1g61380 : 715.0) S-domain-1 29 (SD1-29); FUNCTIONS IN: carbohydrate binding, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid autophosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61390.1); Has 117235 Blast hits to 115670 proteins in 4264 species: Archae - 108; Bacteria - 12715; Metazoa - 42954; Fungi - 9640; Plants - 34538; Viruses - 385; Other Eukaryotes - 16895 (source: NCBI BLink). & (gnl|cdd|36401 : 335.0) no description available & (p17840|slsg3_braol : 289.0) S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage) & (gnl|cdd|47549 : 178.0) no description available & (reliability: 1430.0) & (original description: Putative At1g61550, Description = G-type lectin S-receptor-like serine/threonine-protein kinase At1g61550, PFAM = PF00954;PF11883;PF08276;PF01453;PF07714)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf02411_58081-63141' '(at1g11330 : 721.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-1 13 (TAIR:AT1G11350.1). & (gnl|cdd|36401 : 275.0) no description available & (p17840|slsg3_braol : 238.0) S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage) & (gnl|cdd|85147 : 155.0) no description available & (reliability: 1406.0) & (original description: Putative B120, Description = Serine/threonine-protein kinase, PFAM = PF08276;PF00069;PF01453;PF00954;PF11883)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf02440_237163-243005' '(at4g27290 : 501.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor kinase 3 (TAIR:AT4G21380.1); Has 125077 Blast hits to 123040 proteins in 4681 species: Archae - 101; Bacteria - 14188; Metazoa - 45583; Fungi - 10059; Plants - 36201; Viruses - 449; Other Eukaryotes - 18496 (source: NCBI BLink). & (gnl|cdd|36401 : 324.0) no description available & (q8lkz1|nork_pea : 212.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|29142 : 177.0) no description available & (reliability: 1002.0) & (original description: Putative PGSC0003DMG400044943, Description = Serine/threonine-protein kinase, PFAM = PF00954;PF00069;PF08276)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf02440_245948-260399' '(at4g21380 : 931.0) encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels.; receptor kinase 3 (RK3); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), S-locus, receptor kinase (InterPro:IPR022126); BEST Arabidopsis thaliana protein match is: receptor kinase 2 (TAIR:AT1G65800.1); Has 120297 Blast hits to 118488 proteins in 4631 species: Archae - 97; Bacteria - 13304; Metazoa - 44101; Fungi - 10092; Plants - 34714; Viruses - 410; Other Eukaryotes - 17579 (source: NCBI BLink). & (p07761|slsg6_braol : 393.0) S-locus-specific glycoprotein S6 precursor (SLSG-6) - Brassica oleracea (Wild cabbage) & (gnl|cdd|36401 : 333.0) no description available & (gnl|cdd|47549 : 183.0) no description available & (reliability: 1862.0) & (original description: Putative SD18, Description = Receptor-like serine/threonine-protein kinase SD1-8, PFAM = PF11883;PF00954;PF01453;PF08276;PF12398;PF07714)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf02563_205405-211493' '(at1g61380 : 727.0) S-domain-1 29 (SD1-29); FUNCTIONS IN: carbohydrate binding, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid autophosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61390.1); Has 117235 Blast hits to 115670 proteins in 4264 species: Archae - 108; Bacteria - 12715; Metazoa - 42954; Fungi - 9640; Plants - 34538; Viruses - 385; Other Eukaryotes - 16895 (source: NCBI BLink). & (gnl|cdd|36401 : 337.0) no description available & (p17840|slsg3_braol : 300.0) S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage) & (gnl|cdd|47549 : 179.0) no description available & (reliability: 1454.0) & (original description: Putative SD129, Description = G-type lectin S-receptor-like serine/threonine-protein kinase SD1-29, PFAM = PF00954;PF01453;PF08276;PF11883;PF07714)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf02605_939146-949071' '(at4g27290 : 806.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor kinase 3 (TAIR:AT4G21380.1); Has 125077 Blast hits to 123040 proteins in 4681 species: Archae - 101; Bacteria - 14188; Metazoa - 45583; Fungi - 10059; Plants - 36201; Viruses - 449; Other Eukaryotes - 18496 (source: NCBI BLink). & (p07761|slsg6_braol : 335.0) S-locus-specific glycoprotein S6 precursor (SLSG-6) - Brassica oleracea (Wild cabbage) & (gnl|cdd|36401 : 329.0) no description available & (gnl|cdd|47549 : 181.0) no description available & (reliability: 1612.0) & (original description: Putative glysoja_039336, Description = Serine/threonine-protein kinase, PFAM = PF08276;PF01453;PF07714;PF00954)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf02605_1135154-1139884' '(at4g27290 : 867.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor kinase 3 (TAIR:AT4G21380.1); Has 125077 Blast hits to 123040 proteins in 4681 species: Archae - 101; Bacteria - 14188; Metazoa - 45583; Fungi - 10059; Plants - 36201; Viruses - 449; Other Eukaryotes - 18496 (source: NCBI BLink). & (p07761|slsg6_braol : 343.0) S-locus-specific glycoprotein S6 precursor (SLSG-6) - Brassica oleracea (Wild cabbage) & (gnl|cdd|36401 : 318.0) no description available & (gnl|cdd|47549 : 176.0) no description available & (reliability: 1734.0) & (original description: Putative PGSC0003DMG400019241, Description = Serine/threonine-protein kinase, PFAM = PF07714;PF00954;PF11883;PF01453;PF08276)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf03595_1960586-1963106' '(at4g27300 : 158.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT4G27290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 91.7) no description available & (reliability: 316.0) & (original description: Putative SRK, Description = Serine/threonine-protein kinase, PFAM = PF07714)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf04555_264091-270672' '(at5g24090 : 392.0) Chitinase A (class III) expressed exclusively under environmental stress conditions.; chitinase A (CHIA); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to salt stress, response to cold, cellular response to water deprivation, response to wounding, response to light intensity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, chitinase active site (InterPro:IPR001579), Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p51614|chit3_vitvi : 392.0) Acidic endochitinase precursor (EC 3.2.1.14) - Vitis vinifera (Grape) & (gnl|cdd|39899 : 336.0) no description available & (gnl|cdd|47549 : 173.0) no description available & (reliability: 738.0) & (original description: Putative achi, Description = Serine/threonine-protein kinase, PFAM = PF00704;PF07714)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf04570_129325-134494' '(at1g11340 : 637.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), EGF-like, type 3 (InterPro:IPR000742), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G11410.1); Has 123060 Blast hits to 121063 proteins in 4656 species: Archae - 122; Bacteria - 13729; Metazoa - 45275; Fungi - 10148; Plants - 35343; Viruses - 433; Other Eukaryotes - 18010 (source: NCBI BLink). & (gnl|cdd|36401 : 336.0) no description available & (p17801|kpro_maize : 256.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 174.0) no description available & (reliability: 1254.0) & (original description: Putative ARK3, Description = Serine/threonine-protein kinase, PFAM = PF08276;PF00954;PF07714;PF01453)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf04817_74577-79875' '(at4g21390 : 830.0) B120; FUNCTIONS IN: protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61610.1); Has 119638 Blast hits to 117946 proteins in 4361 species: Archae - 104; Bacteria - 13356; Metazoa - 43759; Fungi - 9937; Plants - 34742; Viruses - 415; Other Eukaryotes - 17325 (source: NCBI BLink). & (gnl|cdd|36401 : 326.0) no description available & (p17840|slsg3_braol : 226.0) S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage) & (gnl|cdd|47549 : 176.0) no description available & (reliability: 1660.0) & (original description: Putative B120, Description = G-type lectin S-receptor-like serine/threonine-protein kinase B120, PFAM = PF07714;PF00954;PF08276;PF01453;PF11883)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf05137_292193-296604' '(p17801|kpro_maize : 689.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (at1g34300 : 360.0) lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 120498 Blast hits to 118775 proteins in 4615 species: Archae - 117; Bacteria - 12995; Metazoa - 44949; Fungi - 10067; Plants - 34445; Viruses - 432; Other Eukaryotes - 17493 (source: NCBI BLink). & (gnl|cdd|36401 : 278.0) no description available & (gnl|cdd|84488 : 173.0) no description available & (reliability: 720.0) & (original description: Putative PK1, Description = Putative receptor protein kinase ZmPK1, PFAM = PF14295;PF00069;PF01453;PF00954)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf05295_510373-515834' '(at4g21380 : 611.0) encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels.; receptor kinase 3 (RK3); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), S-locus, receptor kinase (InterPro:IPR022126); BEST Arabidopsis thaliana protein match is: receptor kinase 2 (TAIR:AT1G65800.1); Has 120297 Blast hits to 118488 proteins in 4631 species: Archae - 97; Bacteria - 13304; Metazoa - 44101; Fungi - 10092; Plants - 34714; Viruses - 410; Other Eukaryotes - 17579 (source: NCBI BLink). & (gnl|cdd|36401 : 335.0) no description available & (p17801|kpro_maize : 265.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47549 : 174.0) no description available & (reliability: 1222.0) & (original description: Putative At4g03230, Description = G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230, PFAM = PF00954;PF01453;PF08276;PF07714)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf05299_39171-46066' '(at4g21390 : 334.0) B120; FUNCTIONS IN: protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61610.1); Has 119638 Blast hits to 117946 proteins in 4361 species: Archae - 104; Bacteria - 13356; Metazoa - 43759; Fungi - 9937; Plants - 34742; Viruses - 415; Other Eukaryotes - 17325 (source: NCBI BLink). & (gnl|cdd|36401 : 334.0) no description available & (q8lkz1|nork_pea : 196.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 175.0) no description available & (reliability: 668.0) & (original description: Putative BnaA07g38960D, Description = BnaA07g38960D protein, PFAM = PF07714)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf05862_146765-153761' '(at4g27290 : 843.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor kinase 3 (TAIR:AT4G21380.1); Has 125077 Blast hits to 123040 proteins in 4681 species: Archae - 101; Bacteria - 14188; Metazoa - 45583; Fungi - 10059; Plants - 36201; Viruses - 449; Other Eukaryotes - 18496 (source: NCBI BLink). & (p07761|slsg6_braol : 351.0) S-locus-specific glycoprotein S6 precursor (SLSG-6) - Brassica oleracea (Wild cabbage) & (gnl|cdd|36401 : 319.0) no description available & (gnl|cdd|47549 : 179.0) no description available & (reliability: 1686.0) & (original description: Putative IRK1, Description = Serine/threonine-protein kinase, PFAM = PF01453;PF08276;PF00954;PF11883;PF07714)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf06050_117507-123186' '(at4g27290 : 725.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor kinase 3 (TAIR:AT4G21380.1); Has 125077 Blast hits to 123040 proteins in 4681 species: Archae - 101; Bacteria - 14188; Metazoa - 45583; Fungi - 10059; Plants - 36201; Viruses - 449; Other Eukaryotes - 18496 (source: NCBI BLink). & (gnl|cdd|36401 : 322.0) no description available & (p07761|slsg6_braol : 306.0) S-locus-specific glycoprotein S6 precursor (SLSG-6) - Brassica oleracea (Wild cabbage) & (gnl|cdd|47549 : 179.0) no description available & (reliability: 1450.0) & (original description: Putative NbSGLP, Description = S locus glycoprotein like protein, PFAM = PF00954;PF08276;PF11883;PF00069;PF01453)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf06295_557741-563549' '(at4g23290 : 341.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 21 (CRK21); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 30 (TAIR:AT4G11460.1); Has 118308 Blast hits to 116879 proteins in 4391 species: Archae - 92; Bacteria - 13400; Metazoa - 43403; Fungi - 10140; Plants - 33618; Viruses - 391; Other Eukaryotes - 17264 (source: NCBI BLink). & (gnl|cdd|36401 : 313.0) no description available & (gnl|cdd|47913 : 235.0) no description available & (q8lpb4|pskr_dauca : 203.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 656.0) & (original description: Putative Chrk1, Description = Receptor-like kinase CHRK1, PFAM = PF07714;PF00704)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf06332_385063-391497' '(at4g27290 : 803.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor kinase 3 (TAIR:AT4G21380.1); Has 125077 Blast hits to 123040 proteins in 4681 species: Archae - 101; Bacteria - 14188; Metazoa - 45583; Fungi - 10059; Plants - 36201; Viruses - 449; Other Eukaryotes - 18496 (source: NCBI BLink). & (gnl|cdd|36401 : 319.0) no description available & (p07761|slsg6_braol : 293.0) S-locus-specific glycoprotein S6 precursor (SLSG-6) - Brassica oleracea (Wild cabbage) & (gnl|cdd|88314 : 183.0) no description available & (reliability: 1606.0) & (original description: Putative PGSC0003DMG400019238, Description = Serine/threonine-protein kinase, PFAM = PF00954;PF01453;PF08276;PF07714)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf06578_1-6231' '(at1g11340 : 838.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), EGF-like, type 3 (InterPro:IPR000742), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G11410.1); Has 123060 Blast hits to 121063 proteins in 4656 species: Archae - 122; Bacteria - 13729; Metazoa - 45275; Fungi - 10148; Plants - 35343; Viruses - 433; Other Eukaryotes - 18010 (source: NCBI BLink). & (gnl|cdd|36401 : 333.0) no description available & (p17840|slsg3_braol : 328.0) S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage) & (gnl|cdd|47549 : 181.0) no description available & (reliability: 1616.0) & (original description: Putative RKS1, Description = G-type lectin S-receptor-like serine/threonine-protein kinase RKS1, PFAM = PF08276;PF01453;PF00954;PF07714)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf06578_15209-25695' '(at4g21380 : 907.0) encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels.; receptor kinase 3 (RK3); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), S-locus, receptor kinase (InterPro:IPR022126); BEST Arabidopsis thaliana protein match is: receptor kinase 2 (TAIR:AT1G65800.1); Has 120297 Blast hits to 118488 proteins in 4631 species: Archae - 97; Bacteria - 13304; Metazoa - 44101; Fungi - 10092; Plants - 34714; Viruses - 410; Other Eukaryotes - 17579 (source: NCBI BLink). & (p17840|slsg3_braol : 398.0) S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage) & (gnl|cdd|36401 : 335.0) no description available & (gnl|cdd|47549 : 185.0) no description available & (reliability: 1814.0) & (original description: Putative SD18, Description = Receptor-like serine/threonine-protein kinase SD1-8, PFAM = PF08276;PF01453;PF11883;PF07714;PF12398;PF00954)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf08341_16093-22555' '(at3g16030 : 388.0) CALLUS EXPRESSION OF RBCS 101 (CES101); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT4G21390.1); Has 121576 Blast hits to 119500 proteins in 4422 species: Archae - 101; Bacteria - 13477; Metazoa - 44302; Fungi - 10440; Plants - 35232; Viruses - 450; Other Eukaryotes - 17574 (source: NCBI BLink). & (gnl|cdd|36401 : 338.0) no description available & (q8lkz1|nork_pea : 207.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 171.0) no description available & (reliability: 738.0) & (original description: Putative CES101, Description = G-type lectin S-receptor-like serine/threonine-protein kinase CES101, PFAM = PF01453;PF08276;PF07714)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf08341_29698-36234' '(at4g21390 : 476.0) B120; FUNCTIONS IN: protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61610.1); Has 119638 Blast hits to 117946 proteins in 4361 species: Archae - 104; Bacteria - 13356; Metazoa - 43759; Fungi - 9937; Plants - 34742; Viruses - 415; Other Eukaryotes - 17325 (source: NCBI BLink). & (gnl|cdd|36401 : 334.0) no description available & (q8lkz1|nork_pea : 205.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 174.0) no description available & (reliability: 952.0) & (original description: Putative CES101, Description = Cysteine-rich RLK (Receptor-like kinase) protein, PFAM = PF01453;PF07714;PF08276)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf08472_307820-313063' '(at4g27290 : 801.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor kinase 3 (TAIR:AT4G21380.1); Has 125077 Blast hits to 123040 proteins in 4681 species: Archae - 101; Bacteria - 14188; Metazoa - 45583; Fungi - 10059; Plants - 36201; Viruses - 449; Other Eukaryotes - 18496 (source: NCBI BLink). & (gnl|cdd|36401 : 324.0) no description available & (p07761|slsg6_braol : 320.0) S-locus-specific glycoprotein S6 precursor (SLSG-6) - Brassica oleracea (Wild cabbage) & (gnl|cdd|47549 : 183.0) no description available & (reliability: 1602.0) & (original description: Putative SRK, Description = S-locus receptor kinase, PFAM = PF01453;PF08276;PF07714;PF11883;PF00954)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf08472_323863-327902' '(at4g27290 : 474.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor kinase 3 (TAIR:AT4G21380.1); Has 125077 Blast hits to 123040 proteins in 4681 species: Archae - 101; Bacteria - 14188; Metazoa - 45583; Fungi - 10059; Plants - 36201; Viruses - 449; Other Eukaryotes - 18496 (source: NCBI BLink). & (p17840|slsg3_braol : 307.0) S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage) & (gnl|cdd|85147 : 128.0) no description available & (reliability: 948.0) & (original description: Putative ISG3, Description = Serine/threonine-protein kinase, PFAM = PF08276;PF01453;PF00954)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf10120_151859-242605' '(at4g27290 : 245.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor kinase 3 (TAIR:AT4G21380.1); Has 125077 Blast hits to 123040 proteins in 4681 species: Archae - 101; Bacteria - 14188; Metazoa - 45583; Fungi - 10059; Plants - 36201; Viruses - 449; Other Eukaryotes - 18496 (source: NCBI BLink). & (p17840|slsg3_braol : 181.0) S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage) & (gnl|cdd|28910 : 106.0) no description available & (reliability: 490.0) & (original description: Putative ISG3, Description = Serine/threonine-protein kinase, PFAM = PF00954;PF01453)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf10846_39436-71594' '(at4g27290 : 526.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor kinase 3 (TAIR:AT4G21380.1); Has 125077 Blast hits to 123040 proteins in 4681 species: Archae - 101; Bacteria - 14188; Metazoa - 45583; Fungi - 10059; Plants - 36201; Viruses - 449; Other Eukaryotes - 18496 (source: NCBI BLink). & (gnl|cdd|36401 : 322.0) no description available & (q8lkz1|nork_pea : 209.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 176.0) no description available & (reliability: 1052.0) & (original description: Putative SRK, Description = Serine/threonine-protein kinase, PFAM = PF08276;PF00069;PF00069)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf10846_65645-71657' '(at4g27290 : 853.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor kinase 3 (TAIR:AT4G21380.1); Has 125077 Blast hits to 123040 proteins in 4681 species: Archae - 101; Bacteria - 14188; Metazoa - 45583; Fungi - 10059; Plants - 36201; Viruses - 449; Other Eukaryotes - 18496 (source: NCBI BLink). & (p17840|slsg3_braol : 329.0) S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage) & (gnl|cdd|36401 : 325.0) no description available & (gnl|cdd|47549 : 178.0) no description available & (reliability: 1706.0) & (original description: Putative At4g27290, Description = G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290, PFAM = PF01453;PF11883;PF00069;PF08276;PF00954)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf13776_279947-283115' '(at4g03230 : 241.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G11340.1); Has 120947 Blast hits to 117758 proteins in 4568 species: Archae - 89; Bacteria - 13334; Metazoa - 43594; Fungi - 9240; Plants - 36995; Viruses - 386; Other Eukaryotes - 17309 (source: NCBI BLink). & (gnl|cdd|36401 : 179.0) no description available & (q8l4h4|nork_medtr : 129.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 114.0) no description available & (reliability: 442.0) & (original description: Putative stk, Description = Serine/threonine-protein kinase, PFAM = PF07714)' T '30.2.24' 'signalling.receptor kinases.S-locus glycoprotein like' 'niben101scf17891_470046-476064' '(at5g24080 : 698.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36401 : 327.0) no description available & (p17801|kpro_maize : 219.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 159.0) no description available & (reliability: 1396.0) & (original description: Putative At5g24080, Description = G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080, PFAM = PF01453;PF00069;PF00954)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'nbv0.3scaffold352_126087-131728' '(gnl|cdd|36401 : 167.0) no description available & (at1g24030 : 117.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 120365 Blast hits to 119013 proteins in 4490 species: Archae - 114; Bacteria - 14164; Metazoa - 43937; Fungi - 10244; Plants - 33641; Viruses - 447; Other Eukaryotes - 17818 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 103.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 86.0) no description available & (reliability: 230.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF07714;PF00069)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'nbv0.3scaffold5975_40129-46655' '(at1g21270 : 397.0) cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase.; wall-associated kinase 2 (WAK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: cellular water homeostasis, protein amino acid phosphorylation, oligosaccharide metabolic process, unidimensional cell growth, response to salicylic acid stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding (InterPro:IPR001881), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), EGF-like region, conserved site (InterPro:IPR013032), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-type aspartate/asparagine hydroxylation site (InterPro:IPR000152), EGF calcium-binding (InterPro:IPR013091), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: wall associated kinase 5 (TAIR:AT1G21230.1); Has 140654 Blast hits to 123720 proteins in 4781 species: Archae - 129; Bacteria - 13911; Metazoa - 65181; Fungi - 9585; Plants - 33448; Viruses - 437; Other Eukaryotes - 17963 (source: NCBI BLink). & (gnl|cdd|36401 : 201.0) no description available & (gnl|cdd|29142 : 120.0) no description available & (o24585|cri4_maize : 97.4) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 794.0) & (original description: Putative WAK1, Description = Wall-associated receptor kinase-like protein, PFAM = PF13947;PF00069;PF07645)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'nbv0.3scaffold8491_13066-16425' '(at1g21270 : 382.0) cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase.; wall-associated kinase 2 (WAK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: cellular water homeostasis, protein amino acid phosphorylation, oligosaccharide metabolic process, unidimensional cell growth, response to salicylic acid stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding (InterPro:IPR001881), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), EGF-like region, conserved site (InterPro:IPR013032), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-type aspartate/asparagine hydroxylation site (InterPro:IPR000152), EGF calcium-binding (InterPro:IPR013091), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: wall associated kinase 5 (TAIR:AT1G21230.1); Has 140654 Blast hits to 123720 proteins in 4781 species: Archae - 129; Bacteria - 13911; Metazoa - 65181; Fungi - 9585; Plants - 33448; Viruses - 437; Other Eukaryotes - 17963 (source: NCBI BLink). & (gnl|cdd|36401 : 330.0) no description available & (o24585|cri4_maize : 206.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 177.0) no description available & (reliability: 764.0) & (original description: Putative Os04g0598600, Description = Os04g0598600 protein, PFAM = PF07645;PF00069)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'nbv0.3scaffold21492_24309-31730' '(gnl|cdd|36401 : 145.0) no description available & (at1g11050 : 116.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor-like kinase in in flowers 3 (TAIR:AT2G48010.1); Has 115297 Blast hits to 114175 proteins in 4324 species: Archae - 104; Bacteria - 13350; Metazoa - 42303; Fungi - 9816; Plants - 32853; Viruses - 335; Other Eukaryotes - 16536 (source: NCBI BLink). & (gnl|cdd|29142 : 107.0) no description available & (o24585|cri4_maize : 89.7) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 210.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF00069)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'nbv0.3scaffold27709_14789-20874' '(at5g02070 : 709.0) Protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G53840.1); Has 114140 Blast hits to 113200 proteins in 4569 species: Archae - 121; Bacteria - 12456; Metazoa - 42740; Fungi - 9504; Plants - 32338; Viruses - 412; Other Eukaryotes - 16569 (source: NCBI BLink). & (gnl|cdd|36401 : 335.0) no description available & (o24585|cri4_maize : 201.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 159.0) no description available & (reliability: 1418.0) & (original description: Putative WAKL20, Description = Wall-associated receptor kinase-like 20, PFAM = PF13947;PF00069)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'nbv0.3scaffold48020_8221-12440' '(at1g21230 : 317.0) encodes a wall-associated kinase; wall associated kinase 5 (WAK5); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding (InterPro:IPR001881), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-type aspartate/asparagine hydroxylation site (InterPro:IPR000152), EGF calcium-binding (InterPro:IPR013091), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: cell wall-associated kinase (TAIR:AT1G21250.1); Has 137298 Blast hits to 123121 proteins in 4733 species: Archae - 125; Bacteria - 14072; Metazoa - 61552; Fungi - 9626; Plants - 33595; Viruses - 427; Other Eukaryotes - 17901 (source: NCBI BLink). & (gnl|cdd|36401 : 298.0) no description available & (gnl|cdd|29142 : 166.0) no description available & (o24585|cri4_maize : 152.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 634.0) & (original description: Putative WAK1, Description = Wall-associated receptor kinase-like protein, PFAM = PF00069)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'nbv0.5scaffold3523_81214-103764' '(at1g21270 : 540.0) cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase.; wall-associated kinase 2 (WAK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: cellular water homeostasis, protein amino acid phosphorylation, oligosaccharide metabolic process, unidimensional cell growth, response to salicylic acid stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding (InterPro:IPR001881), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), EGF-like region, conserved site (InterPro:IPR013032), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-type aspartate/asparagine hydroxylation site (InterPro:IPR000152), EGF calcium-binding (InterPro:IPR013091), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: wall associated kinase 5 (TAIR:AT1G21230.1); Has 140654 Blast hits to 123720 proteins in 4781 species: Archae - 129; Bacteria - 13911; Metazoa - 65181; Fungi - 9585; Plants - 33448; Viruses - 437; Other Eukaryotes - 17963 (source: NCBI BLink). & (gnl|cdd|36401 : 337.0) no description available & (o24585|cri4_maize : 200.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 187.0) no description available & (reliability: 1080.0) & (original description: Putative WAK2, Description = Wall-associated receptor kinase 2, PFAM = PF07645;PF00069;PF13947)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'nbv0.5scaffold8876_1-3384' '(at2g23450 : 438.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like (InterPro:IPR006210), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G66790.1); Has 113981 Blast hits to 112485 proteins in 3193 species: Archae - 103; Bacteria - 12981; Metazoa - 41291; Fungi - 9532; Plants - 32683; Viruses - 360; Other Eukaryotes - 17031 (source: NCBI BLink). & (gnl|cdd|36401 : 231.0) no description available & (gnl|cdd|29142 : 139.0) no description available & (q8l4h4|nork_medtr : 130.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 876.0) & (original description: Putative WAKL14, Description = Wall-associated receptor kinase-like 14, PFAM = PF00069)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'niben044scf00005698ctg028_1888-7707' '(gnl|cdd|36401 : 167.0) no description available & (at1g24030 : 117.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 120365 Blast hits to 119013 proteins in 4490 species: Archae - 114; Bacteria - 14164; Metazoa - 43937; Fungi - 10244; Plants - 33641; Viruses - 447; Other Eukaryotes - 17818 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 105.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47550 : 87.6) no description available & (reliability: 224.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF07714;PF00069)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'niben044scf00011055ctg000_1834-5175' '(at1g21270 : 377.0) cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase.; wall-associated kinase 2 (WAK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: cellular water homeostasis, protein amino acid phosphorylation, oligosaccharide metabolic process, unidimensional cell growth, response to salicylic acid stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding (InterPro:IPR001881), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), EGF-like region, conserved site (InterPro:IPR013032), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-type aspartate/asparagine hydroxylation site (InterPro:IPR000152), EGF calcium-binding (InterPro:IPR013091), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: wall associated kinase 5 (TAIR:AT1G21230.1); Has 140654 Blast hits to 123720 proteins in 4781 species: Archae - 129; Bacteria - 13911; Metazoa - 65181; Fungi - 9585; Plants - 33448; Viruses - 437; Other Eukaryotes - 17963 (source: NCBI BLink). & (gnl|cdd|36401 : 319.0) no description available & (o24585|cri4_maize : 195.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 178.0) no description available & (reliability: 754.0) & (original description: Putative Os04g0598600, Description = Os04g0598600 protein, PFAM = PF07645;PF00069)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'niben044scf00011055ctg002_2618-9730' '(at1g21270 : 542.0) cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase.; wall-associated kinase 2 (WAK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: cellular water homeostasis, protein amino acid phosphorylation, oligosaccharide metabolic process, unidimensional cell growth, response to salicylic acid stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding (InterPro:IPR001881), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), EGF-like region, conserved site (InterPro:IPR013032), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-type aspartate/asparagine hydroxylation site (InterPro:IPR000152), EGF calcium-binding (InterPro:IPR013091), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: wall associated kinase 5 (TAIR:AT1G21230.1); Has 140654 Blast hits to 123720 proteins in 4781 species: Archae - 129; Bacteria - 13911; Metazoa - 65181; Fungi - 9585; Plants - 33448; Viruses - 437; Other Eukaryotes - 17963 (source: NCBI BLink). & (gnl|cdd|36401 : 342.0) no description available & (o24585|cri4_maize : 198.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 184.0) no description available & (reliability: 1084.0) & (original description: Putative WAK2, Description = Wall-associated receptor kinase 2, PFAM = PF13947;PF07645;PF00069)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'niben044scf00011055ctg002_3716-8493' '(at1g21270 : 103.0) cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase.; wall-associated kinase 2 (WAK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: cellular water homeostasis, protein amino acid phosphorylation, oligosaccharide metabolic process, unidimensional cell growth, response to salicylic acid stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding (InterPro:IPR001881), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), EGF-like region, conserved site (InterPro:IPR013032), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-type aspartate/asparagine hydroxylation site (InterPro:IPR000152), EGF calcium-binding (InterPro:IPR013091), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: wall associated kinase 5 (TAIR:AT1G21230.1); Has 140654 Blast hits to 123720 proteins in 4781 species: Archae - 129; Bacteria - 13911; Metazoa - 65181; Fungi - 9585; Plants - 33448; Viruses - 437; Other Eukaryotes - 17963 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative WAK1, Description = Wall-associated receptor kinase-like protein, PFAM = PF07645;PF00008)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'niben044scf00055094ctg003_1-2447' '(gnl|cdd|36401 : 195.0) no description available & (at1g79620 : 134.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G49760.1); Has 173131 Blast hits to 132948 proteins in 4769 species: Archae - 163; Bacteria - 18653; Metazoa - 51943; Fungi - 10632; Plants - 70309; Viruses - 438; Other Eukaryotes - 20993 (source: NCBI BLink). & (q8l4h4|nork_medtr : 117.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 109.0) no description available & (reliability: 246.0) & (original description: Putative At3g26700, Description = Putative leucine-rich repeat receptor-like protein kinase, PFAM = PF07714)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'niben101scf00149_1013502-1021385' '(at1g21270 : 546.0) cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase.; wall-associated kinase 2 (WAK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: cellular water homeostasis, protein amino acid phosphorylation, oligosaccharide metabolic process, unidimensional cell growth, response to salicylic acid stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding (InterPro:IPR001881), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), EGF-like region, conserved site (InterPro:IPR013032), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-type aspartate/asparagine hydroxylation site (InterPro:IPR000152), EGF calcium-binding (InterPro:IPR013091), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: wall associated kinase 5 (TAIR:AT1G21230.1); Has 140654 Blast hits to 123720 proteins in 4781 species: Archae - 129; Bacteria - 13911; Metazoa - 65181; Fungi - 9585; Plants - 33448; Viruses - 437; Other Eukaryotes - 17963 (source: NCBI BLink). & (gnl|cdd|36401 : 346.0) no description available & (o24585|cri4_maize : 205.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 189.0) no description available & (reliability: 1092.0) & (original description: Putative WAK2, Description = Wall-associated receptor kinase 2, PFAM = PF13947;PF00069;PF07645)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'niben101scf00149_1014593-1037514' '(at1g21270 : 101.0) cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase.; wall-associated kinase 2 (WAK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: cellular water homeostasis, protein amino acid phosphorylation, oligosaccharide metabolic process, unidimensional cell growth, response to salicylic acid stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding (InterPro:IPR001881), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), EGF-like region, conserved site (InterPro:IPR013032), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-type aspartate/asparagine hydroxylation site (InterPro:IPR000152), EGF calcium-binding (InterPro:IPR013091), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: wall associated kinase 5 (TAIR:AT1G21230.1); Has 140654 Blast hits to 123720 proteins in 4781 species: Archae - 129; Bacteria - 13911; Metazoa - 65181; Fungi - 9585; Plants - 33448; Viruses - 437; Other Eukaryotes - 17963 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative PGSC0003DMG400011792, Description = Wall-associated receptor kinase-like protein, PFAM = PF07645;PF00008)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'niben101scf00149_1030612-1038686' '(at1g21270 : 543.0) cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase.; wall-associated kinase 2 (WAK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: cellular water homeostasis, protein amino acid phosphorylation, oligosaccharide metabolic process, unidimensional cell growth, response to salicylic acid stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding (InterPro:IPR001881), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), EGF-like region, conserved site (InterPro:IPR013032), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-type aspartate/asparagine hydroxylation site (InterPro:IPR000152), EGF calcium-binding (InterPro:IPR013091), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: wall associated kinase 5 (TAIR:AT1G21230.1); Has 140654 Blast hits to 123720 proteins in 4781 species: Archae - 129; Bacteria - 13911; Metazoa - 65181; Fungi - 9585; Plants - 33448; Viruses - 437; Other Eukaryotes - 17963 (source: NCBI BLink). & (gnl|cdd|36401 : 342.0) no description available & (o24585|cri4_maize : 204.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 191.0) no description available & (reliability: 1086.0) & (original description: Putative WAK2, Description = Wall-associated receptor kinase 2, PFAM = PF07645;PF13947;PF00069)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'niben101scf00149_1037574-1040023' '(at1g79670 : 164.0) Encodes a receptor-like kinase that does not contain an extracellular leucine-rich repeat domain. A novel type of dominant disease-resistance protein that confers resistance to a broad spectrum of Fusarium races.; RESISTANCE TO FUSARIUM OXYSPORUM 1 (RFO1); FUNCTIONS IN: kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system, integral to membrane, cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Wall-associated kinase (InterPro:IPR013695), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: wall associated kinase-like 2 (TAIR:AT1G16130.1); Has 120550 Blast hits to 118930 proteins in 4262 species: Archae - 142; Bacteria - 13516; Metazoa - 44650; Fungi - 10334; Plants - 33695; Viruses - 488; Other Eukaryotes - 17725 (source: NCBI BLink). & (gnl|cdd|36401 : 148.0) no description available & (o24585|cri4_maize : 117.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 328.0) & (original description: Putative BnaC08g01030D, Description = Wall-associated receptor kinase-like protein, PFAM = PF00069)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'niben101scf00177_911277-919523' '(gnl|cdd|36401 : 267.0) no description available & (at5g40380 : 194.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (CRK42); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (TAIR:AT1G70530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29142 : 172.0) no description available & (o24585|cri4_maize : 158.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 368.0) & (original description: Putative Sb08g000610, Description = Putative uncharacterized protein Sb08g000610, PFAM = PF00069)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'niben101scf00369_2558307-2560927' '(at5g02070 : 142.0) Protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G53840.1); Has 114140 Blast hits to 113200 proteins in 4569 species: Archae - 121; Bacteria - 12456; Metazoa - 42740; Fungi - 9504; Plants - 32338; Viruses - 412; Other Eukaryotes - 16569 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative TCM_026724, Description = Wall-associated receptor kinase-like 20, PFAM = PF13947)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'niben101scf00682_492922-497346' '(at5g02070 : 506.0) Protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G53840.1); Has 114140 Blast hits to 113200 proteins in 4569 species: Archae - 121; Bacteria - 12456; Metazoa - 42740; Fungi - 9504; Plants - 32338; Viruses - 412; Other Eukaryotes - 16569 (source: NCBI BLink). & (gnl|cdd|36401 : 359.0) no description available & (q8l4h4|nork_medtr : 218.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 176.0) no description available & (reliability: 1012.0) & (original description: Putative Sb06g027360, Description = Putative uncharacterized protein Sb06g027360, PFAM = PF00069;PF13947)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'niben101scf00682_493632-497388' '(at5g02070 : 514.0) Protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G53840.1); Has 114140 Blast hits to 113200 proteins in 4569 species: Archae - 121; Bacteria - 12456; Metazoa - 42740; Fungi - 9504; Plants - 32338; Viruses - 412; Other Eukaryotes - 16569 (source: NCBI BLink). & (gnl|cdd|36401 : 361.0) no description available & (q8l4h4|nork_medtr : 219.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 177.0) no description available & (reliability: 1028.0) & (original description: Putative WAKL20, Description = Wall-associated receptor kinase-like 20, PFAM = PF13947;PF00069)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'niben101scf02608_112256-119418' '(at2g23450 : 704.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like (InterPro:IPR006210), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G66790.1); Has 113981 Blast hits to 112485 proteins in 3193 species: Archae - 103; Bacteria - 12981; Metazoa - 41291; Fungi - 9532; Plants - 32683; Viruses - 360; Other Eukaryotes - 17031 (source: NCBI BLink). & (gnl|cdd|36401 : 357.0) no description available & (q8l4h4|nork_medtr : 218.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 174.0) no description available & (reliability: 1408.0) & (original description: Putative WAKL14, Description = Wall-associated receptor kinase-like 14, PFAM = PF00069)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'niben101scf03202_361629-367937' '(at1g21270 : 555.0) cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase.; wall-associated kinase 2 (WAK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: cellular water homeostasis, protein amino acid phosphorylation, oligosaccharide metabolic process, unidimensional cell growth, response to salicylic acid stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding (InterPro:IPR001881), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), EGF-like region, conserved site (InterPro:IPR013032), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-type aspartate/asparagine hydroxylation site (InterPro:IPR000152), EGF calcium-binding (InterPro:IPR013091), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: wall associated kinase 5 (TAIR:AT1G21230.1); Has 140654 Blast hits to 123720 proteins in 4781 species: Archae - 129; Bacteria - 13911; Metazoa - 65181; Fungi - 9585; Plants - 33448; Viruses - 437; Other Eukaryotes - 17963 (source: NCBI BLink). & (gnl|cdd|36401 : 331.0) no description available & (o24585|cri4_maize : 201.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 183.0) no description available & (reliability: 1110.0) & (original description: Putative WAK2, Description = Wall-associated receptor kinase 2, PFAM = PF13947;PF00069;PF07645)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'niben101scf03202_396065-402780' '(at1g21270 : 521.0) cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase.; wall-associated kinase 2 (WAK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: cellular water homeostasis, protein amino acid phosphorylation, oligosaccharide metabolic process, unidimensional cell growth, response to salicylic acid stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding (InterPro:IPR001881), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), EGF-like region, conserved site (InterPro:IPR013032), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-type aspartate/asparagine hydroxylation site (InterPro:IPR000152), EGF calcium-binding (InterPro:IPR013091), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: wall associated kinase 5 (TAIR:AT1G21230.1); Has 140654 Blast hits to 123720 proteins in 4781 species: Archae - 129; Bacteria - 13911; Metazoa - 65181; Fungi - 9585; Plants - 33448; Viruses - 437; Other Eukaryotes - 17963 (source: NCBI BLink). & (gnl|cdd|36401 : 336.0) no description available & (o24585|cri4_maize : 202.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 181.0) no description available & (reliability: 1042.0) & (original description: Putative WAK2, Description = Wall-associated receptor kinase 2, PFAM = PF13947;PF07645;PF00069)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'niben101scf03472_40763-50567' '(at1g21270 : 404.0) cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase.; wall-associated kinase 2 (WAK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: cellular water homeostasis, protein amino acid phosphorylation, oligosaccharide metabolic process, unidimensional cell growth, response to salicylic acid stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding (InterPro:IPR001881), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), EGF-like region, conserved site (InterPro:IPR013032), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-type aspartate/asparagine hydroxylation site (InterPro:IPR000152), EGF calcium-binding (InterPro:IPR013091), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: wall associated kinase 5 (TAIR:AT1G21230.1); Has 140654 Blast hits to 123720 proteins in 4781 species: Archae - 129; Bacteria - 13911; Metazoa - 65181; Fungi - 9585; Plants - 33448; Viruses - 437; Other Eukaryotes - 17963 (source: NCBI BLink). & (gnl|cdd|36401 : 320.0) no description available & (o24585|cri4_maize : 185.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 173.0) no description available & (reliability: 808.0) & (original description: Putative RFO1, Description = Wall-associated receptor kinase-like protein, PFAM = PF07645;PF00069)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'niben101scf03472_42758-44581' '(at1g19390 : 128.0) Wall-associated kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Wall-associated kinase (InterPro:IPR013695), EGF-like calcium-binding, conserved site (InterPro:IPR018097), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: wall-associated kinase, putative (TAIR:AT4G31100.1); Has 120805 Blast hits to 118813 proteins in 4422 species: Archae - 117; Bacteria - 13519; Metazoa - 45006; Fungi - 10268; Plants - 33776; Viruses - 486; Other Eukaryotes - 17633 (source: NCBI BLink). & (gnl|cdd|36401 : 92.1) no description available & (reliability: 256.0) & (original description: Putative WAKL1, Description = Wall associated kinase-like 6, putative, PFAM = PF00069)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'niben101scf03534_51831-55923' '(gnl|cdd|36401 : 273.0) no description available & (at4g02010 : 199.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G20300.1); Has 117558 Blast hits to 116281 proteins in 4412 species: Archae - 107; Bacteria - 13740; Metazoa - 43399; Fungi - 9953; Plants - 33036; Viruses - 373; Other Eukaryotes - 16950 (source: NCBI BLink). & (q8l4h4|nork_medtr : 191.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47550 : 155.0) no description available & (reliability: 364.0) & (original description: Putative pto, Description = Putative receptor-like protein kinase, PFAM = PF00069)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'niben101scf04445_142592-148686' '(at5g02070 : 746.0) Protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G53840.1); Has 114140 Blast hits to 113200 proteins in 4569 species: Archae - 121; Bacteria - 12456; Metazoa - 42740; Fungi - 9504; Plants - 32338; Viruses - 412; Other Eukaryotes - 16569 (source: NCBI BLink). & (gnl|cdd|36401 : 335.0) no description available & (o24585|cri4_maize : 216.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 159.0) no description available & (reliability: 1492.0) & (original description: Putative WAKL20, Description = Wall-associated receptor kinase-like 20, PFAM = PF00069;PF13947)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'niben101scf05799_287635-294729' '(at2g23450 : 625.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like (InterPro:IPR006210), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G66790.1); Has 113981 Blast hits to 112485 proteins in 3193 species: Archae - 103; Bacteria - 12981; Metazoa - 41291; Fungi - 9532; Plants - 32683; Viruses - 360; Other Eukaryotes - 17031 (source: NCBI BLink). & (gnl|cdd|36401 : 340.0) no description available & (q8l4h4|nork_medtr : 213.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 170.0) no description available & (reliability: 1250.0) & (original description: Putative WAKL14, Description = Wall-associated receptor kinase-like 14, PFAM = PF00069)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'niben101scf10330_230809-236711' '(at5g02070 : 628.0) Protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G53840.1); Has 114140 Blast hits to 113200 proteins in 4569 species: Archae - 121; Bacteria - 12456; Metazoa - 42740; Fungi - 9504; Plants - 32338; Viruses - 412; Other Eukaryotes - 16569 (source: NCBI BLink). & (gnl|cdd|36401 : 355.0) no description available & (q8l4h4|nork_medtr : 226.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 172.0) no description available & (reliability: 1256.0) & (original description: Putative WAKL20, Description = Wall-associated receptor kinase-like 20, PFAM = PF07714;PF13947)' T '30.2.25' 'signalling.receptor kinases.wall associated kinase' 'niben101scf20037_54374-62865' '(at1g16120 : 504.0) wall-associated kinase like; wall associated kinase-like 1 (WAKL1); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system, integral to membrane, cell wall; CONTAINS InterPro DOMAIN/s: Wall-associated kinase (InterPro:IPR013695), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: wall associated kinase-like 5 (TAIR:AT1G16160.1); Has 123437 Blast hits to 121647 proteins in 4379 species: Archae - 141; Bacteria - 14104; Metazoa - 45195; Fungi - 10752; Plants - 34405; Viruses - 501; Other Eukaryotes - 18339 (source: NCBI BLink). & (gnl|cdd|36401 : 325.0) no description available & (o24585|cri4_maize : 192.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|29142 : 178.0) no description available & (reliability: 1008.0) & (original description: Putative WAKL1, Description = Wall-associated receptor kinase-like 1, PFAM = PF13947;PF00069)' T '30.2.26' 'signalling.receptor kinases.crinkly like' 'nbv0.3scaffold13712_2113-6413' '(at3g09780 : 911.0) CRINKLY4 related 1 (CCR1); FUNCTIONS IN: protein serine/threonine kinase activity, receptor activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: TNFR/CD27/30/40/95 cysteine-rich region (InterPro:IPR001368), Protein kinase, ATP binding site (InterPro:IPR017441), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: CRINKLY4 related 2 (TAIR:AT2G39180.1); Has 92283 Blast hits to 90862 proteins in 3897 species: Archae - 88; Bacteria - 8648; Metazoa - 34704; Fungi - 6843; Plants - 29398; Viruses - 212; Other Eukaryotes - 12390 (source: NCBI BLink). & (gnl|cdd|36401 : 281.0) no description available & (o24585|cri4_maize : 195.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 155.0) no description available & (reliability: 1822.0) & (original description: Putative CCR1, Description = Serine/threonine-protein kinase-like protein CCR1, PFAM = PF00069)' T '30.2.26' 'signalling.receptor kinases.crinkly like' 'nbv0.3scaffold23479_12450-17195' '(at3g59420 : 1187.0) Encodes a membrane localized protein with similarity to receptor kinases which is involved in epidermal cell differentiation. Flowers of mutants have disorganized ovule integument growth and abnormal sepal margins. In the roots, mutants initiate more lateral roots but fewer laterals actually emerge due to defects in lateral root formation. Mutants also display disorganized columella. The root phenotypes can be traced to abnormalities in asymmetric divisions in the pericycle and root apex. Conflicting data regarding the role of the kinase domain- which may or may not be required for function. Complementation studies indicate that the C-terminal domain is also not required for signaling function. May be regulated by protein turnover which is mediated by endocytic processes.; crinkly4 (CR4); CONTAINS InterPro DOMAIN/s: TNFR/CD27/30/40/95 cysteine-rich region (InterPro:IPR001368), Protein kinase, ATP binding site (InterPro:IPR017441), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: CRINKLY4 related 2 (TAIR:AT2G39180.1); Has 114508 Blast hits to 112789 proteins in 4411 species: Archae - 95; Bacteria - 12671; Metazoa - 42599; Fungi - 9662; Plants - 32482; Viruses - 390; Other Eukaryotes - 16609 (source: NCBI BLink). & (o24585|cri4_maize : 1090.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|36401 : 342.0) no description available & (gnl|cdd|47549 : 165.0) no description available & (reliability: 2374.0) & (original description: Putative ACR4, Description = Putative serine/threonine-protein kinase-like protein CCR3, PFAM = PF00069;PF13540)' T '30.2.26' 'signalling.receptor kinases.crinkly like' 'nbv0.3scaffold52107_3814-6872' '(at3g09780 : 176.0) CRINKLY4 related 1 (CCR1); FUNCTIONS IN: protein serine/threonine kinase activity, receptor activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: TNFR/CD27/30/40/95 cysteine-rich region (InterPro:IPR001368), Protein kinase, ATP binding site (InterPro:IPR017441), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: CRINKLY4 related 2 (TAIR:AT2G39180.1); Has 92283 Blast hits to 90862 proteins in 3897 species: Archae - 88; Bacteria - 8648; Metazoa - 34704; Fungi - 6843; Plants - 29398; Viruses - 212; Other Eukaryotes - 12390 (source: NCBI BLink). & (gnl|cdd|36401 : 150.0) no description available & (o24585|cri4_maize : 114.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 87.1) no description available & (reliability: 352.0) & (original description: Putative CCR1, Description = Serine/threonine-protein kinase-like protein CCR1, PFAM = PF07714)' T '30.2.26' 'signalling.receptor kinases.crinkly like' 'nbv0.5scaffold100_494526-498904' '(at3g55950 : 750.0) CRINKLY4 related 3 (CCR3); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: CRINKLY4 related 4 (TAIR:AT5G47850.1); Has 117697 Blast hits to 115463 proteins in 4296 species: Archae - 105; Bacteria - 13273; Metazoa - 42642; Fungi - 9844; Plants - 33569; Viruses - 607; Other Eukaryotes - 17657 (source: NCBI BLink). & (gnl|cdd|36401 : 351.0) no description available & (o24585|cri4_maize : 242.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|88314 : 174.0) no description available & (reliability: 1500.0) & (original description: Putative CCR3, Description = Putative serine/threonine-protein kinase-like protein CCR3, PFAM = PF13540;PF00069)' T '30.2.26' 'signalling.receptor kinases.crinkly like' 'nbv0.5scaffold431_126393-131071' '(at3g59420 : 1205.0) Encodes a membrane localized protein with similarity to receptor kinases which is involved in epidermal cell differentiation. Flowers of mutants have disorganized ovule integument growth and abnormal sepal margins. In the roots, mutants initiate more lateral roots but fewer laterals actually emerge due to defects in lateral root formation. Mutants also display disorganized columella. The root phenotypes can be traced to abnormalities in asymmetric divisions in the pericycle and root apex. Conflicting data regarding the role of the kinase domain- which may or may not be required for function. Complementation studies indicate that the C-terminal domain is also not required for signaling function. May be regulated by protein turnover which is mediated by endocytic processes.; crinkly4 (CR4); CONTAINS InterPro DOMAIN/s: TNFR/CD27/30/40/95 cysteine-rich region (InterPro:IPR001368), Protein kinase, ATP binding site (InterPro:IPR017441), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: CRINKLY4 related 2 (TAIR:AT2G39180.1); Has 114508 Blast hits to 112789 proteins in 4411 species: Archae - 95; Bacteria - 12671; Metazoa - 42599; Fungi - 9662; Plants - 32482; Viruses - 390; Other Eukaryotes - 16609 (source: NCBI BLink). & (o24585|cri4_maize : 1129.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|36401 : 347.0) no description available & (gnl|cdd|47549 : 166.0) no description available & (reliability: 2410.0) & (original description: Putative ACR4, Description = Putative serine/threonine-protein kinase-like protein CCR3, PFAM = PF00069;PF13540)' T '30.2.26' 'signalling.receptor kinases.crinkly like' 'nbv0.5scaffold2423_196655-199586' '(gnl|cdd|36401 : 151.0) no description available & (at3g09780 : 149.0) CRINKLY4 related 1 (CCR1); FUNCTIONS IN: protein serine/threonine kinase activity, receptor activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: TNFR/CD27/30/40/95 cysteine-rich region (InterPro:IPR001368), Protein kinase, ATP binding site (InterPro:IPR017441), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: CRINKLY4 related 2 (TAIR:AT2G39180.1); Has 92283 Blast hits to 90862 proteins in 3897 species: Archae - 88; Bacteria - 8648; Metazoa - 34704; Fungi - 6843; Plants - 29398; Viruses - 212; Other Eukaryotes - 12390 (source: NCBI BLink). & (o24585|cri4_maize : 97.8) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 87.1) no description available & (reliability: 298.0) & (original description: Putative pk2, Description = Serine/threonine-protein kinase PBS1, PFAM = PF07714)' T '30.2.26' 'signalling.receptor kinases.crinkly like' 'nbv0.5scaffold4392_145079-149754' '(at3g59420 : 1208.0) Encodes a membrane localized protein with similarity to receptor kinases which is involved in epidermal cell differentiation. Flowers of mutants have disorganized ovule integument growth and abnormal sepal margins. In the roots, mutants initiate more lateral roots but fewer laterals actually emerge due to defects in lateral root formation. Mutants also display disorganized columella. The root phenotypes can be traced to abnormalities in asymmetric divisions in the pericycle and root apex. Conflicting data regarding the role of the kinase domain- which may or may not be required for function. Complementation studies indicate that the C-terminal domain is also not required for signaling function. May be regulated by protein turnover which is mediated by endocytic processes.; crinkly4 (CR4); CONTAINS InterPro DOMAIN/s: TNFR/CD27/30/40/95 cysteine-rich region (InterPro:IPR001368), Protein kinase, ATP binding site (InterPro:IPR017441), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: CRINKLY4 related 2 (TAIR:AT2G39180.1); Has 114508 Blast hits to 112789 proteins in 4411 species: Archae - 95; Bacteria - 12671; Metazoa - 42599; Fungi - 9662; Plants - 32482; Viruses - 390; Other Eukaryotes - 16609 (source: NCBI BLink). & (o24585|cri4_maize : 1115.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|36401 : 348.0) no description available & (gnl|cdd|47549 : 166.0) no description available & (reliability: 2416.0) & (original description: Putative ACR4, Description = Serine/threonine-protein kinase-like protein ACR4, PFAM = PF00069;PF13540)' T '30.2.26' 'signalling.receptor kinases.crinkly like' 'nbv0.5scaffold4786_53092-56150' '(at3g09780 : 261.0) CRINKLY4 related 1 (CCR1); FUNCTIONS IN: protein serine/threonine kinase activity, receptor activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: TNFR/CD27/30/40/95 cysteine-rich region (InterPro:IPR001368), Protein kinase, ATP binding site (InterPro:IPR017441), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: CRINKLY4 related 2 (TAIR:AT2G39180.1); Has 92283 Blast hits to 90862 proteins in 3897 species: Archae - 88; Bacteria - 8648; Metazoa - 34704; Fungi - 6843; Plants - 29398; Viruses - 212; Other Eukaryotes - 12390 (source: NCBI BLink). & (gnl|cdd|36401 : 187.0) no description available & (o24585|cri4_maize : 145.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 117.0) no description available & (reliability: 522.0) & (original description: Putative ACR4, Description = Serine/threonine-protein kinase-like protein CCR1, PFAM = PF07714)' T '30.2.26' 'signalling.receptor kinases.crinkly like' 'niben101scf00318_372856-377319' '(at3g55950 : 805.0) CRINKLY4 related 3 (CCR3); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: CRINKLY4 related 4 (TAIR:AT5G47850.1); Has 117697 Blast hits to 115463 proteins in 4296 species: Archae - 105; Bacteria - 13273; Metazoa - 42642; Fungi - 9844; Plants - 33569; Viruses - 607; Other Eukaryotes - 17657 (source: NCBI BLink). & (gnl|cdd|36401 : 350.0) no description available & (o24585|cri4_maize : 241.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|88314 : 174.0) no description available & (reliability: 1610.0) & (original description: Putative CCR3, Description = Putative serine/threonine-protein kinase-like protein CCR3, PFAM = PF00069;PF13540)' T '30.2.26' 'signalling.receptor kinases.crinkly like' 'niben101scf02517_340590-345446' '(at3g59420 : 1208.0) Encodes a membrane localized protein with similarity to receptor kinases which is involved in epidermal cell differentiation. Flowers of mutants have disorganized ovule integument growth and abnormal sepal margins. In the roots, mutants initiate more lateral roots but fewer laterals actually emerge due to defects in lateral root formation. Mutants also display disorganized columella. The root phenotypes can be traced to abnormalities in asymmetric divisions in the pericycle and root apex. Conflicting data regarding the role of the kinase domain- which may or may not be required for function. Complementation studies indicate that the C-terminal domain is also not required for signaling function. May be regulated by protein turnover which is mediated by endocytic processes.; crinkly4 (CR4); CONTAINS InterPro DOMAIN/s: TNFR/CD27/30/40/95 cysteine-rich region (InterPro:IPR001368), Protein kinase, ATP binding site (InterPro:IPR017441), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: CRINKLY4 related 2 (TAIR:AT2G39180.1); Has 114508 Blast hits to 112789 proteins in 4411 species: Archae - 95; Bacteria - 12671; Metazoa - 42599; Fungi - 9662; Plants - 32482; Viruses - 390; Other Eukaryotes - 16609 (source: NCBI BLink). & (o24585|cri4_maize : 1114.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|36401 : 349.0) no description available & (gnl|cdd|47549 : 166.0) no description available & (reliability: 2416.0) & (original description: Putative ACR4, Description = Serine/threonine-protein kinase-like protein ACR4, PFAM = PF00069;PF13540)' T '30.2.26' 'signalling.receptor kinases.crinkly like' 'niben101scf03534_51831-55923' '(gnl|cdd|36401 : 273.0) no description available & (at4g02010 : 199.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G20300.1); Has 117558 Blast hits to 116281 proteins in 4412 species: Archae - 107; Bacteria - 13740; Metazoa - 43399; Fungi - 9953; Plants - 33036; Viruses - 373; Other Eukaryotes - 16950 (source: NCBI BLink). & (q8l4h4|nork_medtr : 191.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47550 : 155.0) no description available & (reliability: 362.0) & (original description: Putative pto, Description = Putative receptor-like protein kinase, PFAM = PF00069)' T '30.2.26' 'signalling.receptor kinases.crinkly like' 'niben101scf03572_362763-366148' '(at3g51990 : 388.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G28390.2); Has 110531 Blast hits to 109509 proteins in 4468 species: Archae - 125; Bacteria - 12250; Metazoa - 41494; Fungi - 9129; Plants - 31227; Viruses - 433; Other Eukaryotes - 15873 (source: NCBI BLink). & (gnl|cdd|36401 : 296.0) no description available & (o24585|cri4_maize : 265.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 156.0) no description available & (reliability: 776.0) & (original description: Putative At3g51990, Description = Serine/threonine-protein kinase-like protein At3g51990, PFAM = PF00069)' T '30.2.26' 'signalling.receptor kinases.crinkly like' 'niben101scf05321_214502-240640' '(at1g28390 : 391.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G51990.1). & (gnl|cdd|36401 : 305.0) no description available & (o24585|cri4_maize : 244.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 156.0) no description available & (reliability: 782.0) & (original description: Putative At1g28390, Description = Serine/threonine-protein kinase-like protein At1g28390, PFAM = PF07714)' T '30.2.26' 'signalling.receptor kinases.crinkly like' 'niben101scf06928_16369-141523' '(at3g09780 : 231.0) CRINKLY4 related 1 (CCR1); FUNCTIONS IN: protein serine/threonine kinase activity, receptor activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: TNFR/CD27/30/40/95 cysteine-rich region (InterPro:IPR001368), Protein kinase, ATP binding site (InterPro:IPR017441), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: CRINKLY4 related 2 (TAIR:AT2G39180.1); Has 92283 Blast hits to 90862 proteins in 3897 species: Archae - 88; Bacteria - 8648; Metazoa - 34704; Fungi - 6843; Plants - 29398; Viruses - 212; Other Eukaryotes - 12390 (source: NCBI BLink). & (gnl|cdd|36401 : 189.0) no description available & (o24585|cri4_maize : 124.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 119.0) no description available & (reliability: 462.0) & (original description: Putative ACR4, Description = Serine/threonine-protein kinase PBS1, PFAM = PF07714)' T '30.2.26' 'signalling.receptor kinases.crinkly like' 'niben101scf06928_137424-141724' '(at3g09780 : 875.0) CRINKLY4 related 1 (CCR1); FUNCTIONS IN: protein serine/threonine kinase activity, receptor activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: TNFR/CD27/30/40/95 cysteine-rich region (InterPro:IPR001368), Protein kinase, ATP binding site (InterPro:IPR017441), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: CRINKLY4 related 2 (TAIR:AT2G39180.1); Has 92283 Blast hits to 90862 proteins in 3897 species: Archae - 88; Bacteria - 8648; Metazoa - 34704; Fungi - 6843; Plants - 29398; Viruses - 212; Other Eukaryotes - 12390 (source: NCBI BLink). & (gnl|cdd|36401 : 281.0) no description available & (o24585|cri4_maize : 195.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|87344 : 155.0) no description available & (reliability: 1750.0) & (original description: Putative CCR1, Description = Serine/threonine-protein kinase-like protein CCR1, PFAM = PF00069;PF00020)' T '30.2.26' 'signalling.receptor kinases.crinkly like' 'niben101scf08621_486955-491327' '(at5g47850 : 694.0) CRINKLY4 related 4 (CCR4); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: CRINKLY4 related 3 (TAIR:AT3G55950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 347.0) no description available & (o24585|cri4_maize : 270.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 176.0) no description available & (reliability: 1388.0) & (original description: Putative CCR4, Description = Serine/threonine-protein kinase-like protein CCR4, PFAM = PF13540;PF13540;PF00069)' T '30.2.26' 'signalling.receptor kinases.crinkly like' 'niben101scf14649_13030-16142' '(gnl|cdd|36401 : 260.0) no description available & (at5g23170 : 246.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G28390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24585|cri4_maize : 187.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|47550 : 130.0) no description available & (reliability: 492.0) & (original description: Putative At5g23170, Description = Serine/threonine-protein kinase-like protein At5g23170, PFAM = PF00069)' T '30.2.27' 'signalling.receptor kinases.C-Lectin' 'nbv0.3scaffold25377_1-7081' '(at1g52310 : 695.0) protein kinase family protein / C-type lectin domain-containing protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C-type lectin (InterPro:IPR001304), Protein kinase, catalytic domain (InterPro:IPR000719), C-type lectin fold (InterPro:IPR016187), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), C-type lectin-like (InterPro:IPR016186); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G61860.1); Has 99398 Blast hits to 98054 proteins in 3684 species: Archae - 81; Bacteria - 11858; Metazoa - 37328; Fungi - 6469; Plants - 30414; Viruses - 265; Other Eukaryotes - 12983 (source: NCBI BLink). & (gnl|cdd|36401 : 303.0) no description available & (q8lpb4|pskr_dauca : 197.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|88314 : 141.0) no description available & (reliability: 1390.0) & (original description: Putative At1g52310, Description = C-type lectin receptor-like tyrosine-protein kinase At1g52310, PFAM = PF07714;PF00059)' T '30.2.27' 'signalling.receptor kinases.C-Lectin' 'niben101scf01154_2039046-2047146' '(at1g52310 : 688.0) protein kinase family protein / C-type lectin domain-containing protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C-type lectin (InterPro:IPR001304), Protein kinase, catalytic domain (InterPro:IPR000719), C-type lectin fold (InterPro:IPR016187), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), C-type lectin-like (InterPro:IPR016186); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G61860.1); Has 99398 Blast hits to 98054 proteins in 3684 species: Archae - 81; Bacteria - 11858; Metazoa - 37328; Fungi - 6469; Plants - 30414; Viruses - 265; Other Eukaryotes - 12983 (source: NCBI BLink). & (gnl|cdd|36401 : 304.0) no description available & (q8lpb4|pskr_dauca : 198.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|88314 : 141.0) no description available & (reliability: 1376.0) & (original description: Putative At1g52310, Description = C-type lectin receptor-like tyrosine-protein kinase At1g52310, PFAM = PF00059;PF07714)' T '30.2.99' 'signalling.receptor kinases.misc' 'nbv0.3scaffold352_126087-131728' '(gnl|cdd|36401 : 167.0) no description available & (at1g24030 : 117.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 120365 Blast hits to 119013 proteins in 4490 species: Archae - 114; Bacteria - 14164; Metazoa - 43937; Fungi - 10244; Plants - 33641; Viruses - 447; Other Eukaryotes - 17818 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 103.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 86.0) no description available & (reliability: 224.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF07714;PF00069)' T '30.2.99' 'signalling.receptor kinases.misc' 'nbv0.3scaffold3282_65793-74766' '(q8l4h4|nork_medtr : 842.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|36401 : 350.0) no description available & (at2g29000 : 326.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G28960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|87344 : 159.0) no description available & (reliability: 622.0) & (original description: Putative NORK, Description = Nodulation receptor kinase, PFAM = PF07714;PF12819)' T '30.2.99' 'signalling.receptor kinases.misc' 'nbv0.3scaffold21492_24309-31730' '(gnl|cdd|36401 : 145.0) no description available & (at1g11050 : 116.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor-like kinase in in flowers 3 (TAIR:AT2G48010.1); Has 115297 Blast hits to 114175 proteins in 4324 species: Archae - 104; Bacteria - 13350; Metazoa - 42303; Fungi - 9816; Plants - 32853; Viruses - 335; Other Eukaryotes - 16536 (source: NCBI BLink). & (gnl|cdd|29142 : 107.0) no description available & (o24585|cri4_maize : 89.7) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 228.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF00069)' T '30.2.99' 'signalling.receptor kinases.misc' 'nbv0.3scaffold22294_3819-7207' '(at3g19320 : 395.0) Leucine-rich repeat (LRR) family protein; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G49750.1); Has 128497 Blast hits to 47794 proteins in 2067 species: Archae - 184; Bacteria - 14728; Metazoa - 28641; Fungi - 6922; Plants - 61680; Viruses - 2227; Other Eukaryotes - 14115 (source: NCBI BLink). & (p93194|rpk1_iponi : 114.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 790.0) & (original description: Putative Os04g0505200, Description = OSJNBa0014K14.21 protein, PFAM = )' T '30.2.99' 'signalling.receptor kinases.misc' 'nbv0.3scaffold24501_23483-26847' '(at1g33260 : 299.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G10390.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 276.0) no description available & (q8l4h4|nork_medtr : 170.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 154.0) no description available & (reliability: 598.0) & (original description: Putative At1g33260, Description = Probable receptor-like protein kinase At1g33260, PFAM = PF00069)' T '30.2.99' 'signalling.receptor kinases.misc' 'nbv0.3scaffold30044_1-4006' '(at3g02130 : 815.0) receptor-like protein kinase 2 (RPK2); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: lignin metabolic process, protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, pollen maturation, anther dehiscence; LOCATED IN: plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor-like protein kinase 1 (TAIR:AT1G69270.1); Has 212351 Blast hits to 140653 proteins in 4689 species: Archae - 161; Bacteria - 19257; Metazoa - 62611; Fungi - 11388; Plants - 92974; Viruses - 608; Other Eukaryotes - 25352 (source: NCBI BLink). & (p93194|rpk1_iponi : 283.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 182.0) no description available & (gnl|cdd|29142 : 131.0) no description available & (reliability: 1630.0) & (original description: Putative RPK2, Description = LRR receptor-like serine/threonine-protein kinase RPK2, PFAM = PF00069;PF08263;PF12799;PF13855)' T '30.2.99' 'signalling.receptor kinases.misc' 'nbv0.3scaffold48756_1-12311' '(at2g28250 : 549.0) NCRK; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G10620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 338.0) no description available & (q8lkz1|nork_pea : 211.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|87344 : 159.0) no description available & (reliability: 1098.0) & (original description: Putative NCRK, Description = Receptor-like serine/threonine-protein kinase NCRK, PFAM = PF00069)' T '30.2.99' 'signalling.receptor kinases.misc' 'nbv0.3scaffold52963_10520-14131' '(gnl|cdd|36401 : 345.0) no description available & (at1g52540 : 302.0) Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G15890.1); Has 98543 Blast hits to 97377 proteins in 3831 species: Archae - 68; Bacteria - 11032; Metazoa - 36701; Fungi - 6941; Plants - 30133; Viruses - 293; Other Eukaryotes - 13375 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 214.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 158.0) no description available & (reliability: 596.0) & (original description: Putative PERK1, Description = PTI1-like tyrosine-protein kinase, PFAM = PF00069)' T '30.2.99' 'signalling.receptor kinases.misc' 'nbv0.3scaffold58948_1-5048' '(at1g52540 : 432.0) Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G15890.1); Has 98543 Blast hits to 97377 proteins in 3831 species: Archae - 68; Bacteria - 11032; Metazoa - 36701; Fungi - 6941; Plants - 30133; Viruses - 293; Other Eukaryotes - 13375 (source: NCBI BLink). & (gnl|cdd|36401 : 370.0) no description available & (q8lpb4|pskr_dauca : 235.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 167.0) no description available & (reliability: 846.0) & (original description: Putative At3g15890, Description = PTI1-like tyrosine-protein kinase At3g15890, PFAM = PF00069)' T '30.2.99' 'signalling.receptor kinases.misc' 'nbv0.3scaffold86968_132-3494' '(p10290|mybc_maize : 197.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (at3g13540 : 196.0) Encodes a member of the MYB family of transcriptional regulators. MYB5 act as a negative regulator of trichome branching and play a role in the correct formation of the seed coat and possibly the formation the underlying endosperm layers. Loss of function mutations have defects in seed coat mucilage and columella cells as well as trichome defects (smaller and reduced number of branches).; myb domain protein 5 (MYB5); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 17 (TAIR:AT3G61250.1); Has 8972 Blast hits to 8275 proteins in 512 species: Archae - 0; Bacteria - 0; Metazoa - 834; Fungi - 461; Plants - 5987; Viruses - 3; Other Eukaryotes - 1687 (source: NCBI BLink). & (gnl|cdd|35271 : 182.0) no description available & (reliability: 368.0) & (original description: Putative MYB8, Description = Putative R2R3 MYB protein 8, PFAM = PF00249;PF00249)' T '30.2.99' 'signalling.receptor kinases.misc' 'nbv0.5scaffold39_1180153-1183515' '(at1g22640 : 197.0) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression; myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (p10290|mybc_maize : 196.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (gnl|cdd|35271 : 182.0) no description available & (reliability: 366.0) & (original description: Putative MYB6, Description = MYB6, PFAM = PF00249;PF00249)' T '30.2.99' 'signalling.receptor kinases.misc' 'nbv0.5scaffold1473_349077-352860' '(gnl|cdd|36401 : 345.0) no description available & (at1g52540 : 326.0) Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G15890.1); Has 98543 Blast hits to 97377 proteins in 3831 species: Archae - 68; Bacteria - 11032; Metazoa - 36701; Fungi - 6941; Plants - 30133; Viruses - 293; Other Eukaryotes - 13375 (source: NCBI BLink). & (q8lkz1|nork_pea : 235.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 161.0) no description available & (reliability: 640.0) & (original description: Putative Os09g0531701, Description = Os09g0531701 protein, PFAM = PF00069)' T '30.2.99' 'signalling.receptor kinases.misc' 'nbv0.5scaffold4497_21094-63867' '(q7xbh4|myb4_orysa : 152.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 150.0) no description available & (at3g23250 : 149.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative lbm1, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T '30.2.99' 'signalling.receptor kinases.misc' 'nbv0.5scaffold5676_1746-7341' '(at4g29990 : 291.0) Leucine-rich repeat transmembrane protein kinase protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, leaf whorl, root; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: FLG22-induced receptor-like kinase 1 (TAIR:AT2G19190.1); Has 171907 Blast hits to 132045 proteins in 5043 species: Archae - 136; Bacteria - 15038; Metazoa - 48082; Fungi - 11262; Plants - 76060; Viruses - 464; Other Eukaryotes - 20865 (source: NCBI BLink). & (q8l4h4|nork_medtr : 85.5) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 554.0) & (original description: Putative Os05g0525400, Description = Os05g0525400 protein, PFAM = PF12819)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben044scf00004867ctg009_6488-10595' '(gnl|cdd|36401 : 343.0) no description available & (at1g52540 : 299.0) Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G15890.1); Has 98543 Blast hits to 97377 proteins in 3831 species: Archae - 68; Bacteria - 11032; Metazoa - 36701; Fungi - 6941; Plants - 30133; Viruses - 293; Other Eukaryotes - 13375 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 214.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 158.0) no description available & (reliability: 594.0) & (original description: Putative At3g15890, Description = PTI1-like tyrosine-protein kinase At3g15890, PFAM = PF00069)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben044scf00005698ctg028_1888-7707' '(gnl|cdd|36401 : 167.0) no description available & (at1g24030 : 117.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 120365 Blast hits to 119013 proteins in 4490 species: Archae - 114; Bacteria - 14164; Metazoa - 43937; Fungi - 10244; Plants - 33641; Viruses - 447; Other Eukaryotes - 17818 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 105.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47550 : 87.6) no description available & (reliability: 232.0) & (original description: Putative PGSC0003DMG400005318, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF07714;PF00069)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben044scf00008756ctg019_3588-8736' '(at3g02130 : 588.0) receptor-like protein kinase 2 (RPK2); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: lignin metabolic process, protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, pollen maturation, anther dehiscence; LOCATED IN: plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor-like protein kinase 1 (TAIR:AT1G69270.1); Has 212351 Blast hits to 140653 proteins in 4689 species: Archae - 161; Bacteria - 19257; Metazoa - 62611; Fungi - 11388; Plants - 92974; Viruses - 608; Other Eukaryotes - 25352 (source: NCBI BLink). & (gnl|cdd|36401 : 216.0) no description available & (p93194|rpk1_iponi : 192.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|47550 : 127.0) no description available & (reliability: 1176.0) & (original description: Putative RPK1, Description = LRR receptor-like serine/threonine-protein kinase RPK2, PFAM = PF08263;PF00069;PF12799;PF13855)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben044scf00023850ctg006_338-4187' '(at3g21510 : 184.0) Encodes AHP1, one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).; histidine-containing phosphotransmitter 1 (AHP1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, phosphotransfer (Hpt) domain (InterPro:IPR008207); BEST Arabidopsis thaliana protein match is: histidine-containing phosphotransfer factor 5 (TAIR:AT1G03430.1); Has 358 Blast hits to 357 proteins in 69 species: Archae - 2; Bacteria - 42; Metazoa - 0; Fungi - 41; Plants - 268; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|39944 : 156.0) no description available & (q6vak4|hp1_orysa : 125.0) Histidine-containing phosphotransfer protein 1 (OsHP1) - Oryza sativa (Rice) & (reliability: 354.0) & (original description: Putative hpt2, Description = Putative histidine-containing phosphotransfer protein 2, PFAM = PF01627)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben044scf00024853ctg014_9193-11334' '(q7xbh4|myb4_orysa : 153.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (gnl|cdd|35271 : 153.0) no description available & (at4g21440 : 152.0) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.; MYB-like 102 (MYB102); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative lbm1, Description = Myb-related protein Myb4, PFAM = PF00249;PF00249)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben044scf00027047ctg012_1-5815' '(at3g15610 : 542.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G52730.1); Has 43706 Blast hits to 23089 proteins in 800 species: Archae - 76; Bacteria - 7357; Metazoa - 15603; Fungi - 10314; Plants - 4879; Viruses - 0; Other Eukaryotes - 5477 (source: NCBI BLink). & (gnl|cdd|35499 : 502.0) no description available & (gnl|cdd|29257 : 156.0) no description available & (reliability: 1032.0) & (original description: Putative strap, Description = Serine-threonine kinase receptor-associated protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben044scf00031792ctg000_1-2723' '(at2g25470 : 207.0) receptor like protein 21 (RLP21); INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: hypocotyl; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 14 (TAIR:AT1G74180.1); Has 123339 Blast hits to 32686 proteins in 1192 species: Archae - 50; Bacteria - 9219; Metazoa - 30627; Fungi - 1506; Plants - 72809; Viruses - 37; Other Eukaryotes - 9091 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 174.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35665 : 98.6) no description available & (reliability: 400.0) & (original description: Putative PGSC0003DMG400023396, Description = Leucine-rich repeat receptor protein kinase EXS, putative, PFAM = PF13855;PF13855;PF13855)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben044scf00032590ctg000_713-2472' '(at1g74190 : 112.0) receptor like protein 15 (RLP15); INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 13 (TAIR:AT1G74170.1); Has 128946 Blast hits to 31204 proteins in 1189 species: Archae - 49; Bacteria - 10411; Metazoa - 29723; Fungi - 1446; Plants - 77583; Viruses - 38; Other Eukaryotes - 9696 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 89.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 214.0) & (original description: Putative Eix1, Description = Receptor-like protein, PFAM = PF13516;PF12799;PF00560)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben044scf00033310ctg002_14639-17534' '(at5g13290 : 430.0) Encodes a protein with predicted Ser/Thr kinase activity and membrane localization that is involved in the CLV3 signaling pathway that represses WUS expression in the meristem. Loss of function of CRN can suppress the phenotype caused by overexpression of CLV3. SOL2 isolated as a suppressor of root- specific overexpression of CLE19, a clavata3 like gene. sol2 partially suppresses the short root phenotype caused by CLE19 overexpression. Mutant flowers have extra carpels.; CORYNE (CRN); FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: regulation of meristem growth, regulation of root meristem growth, meristem maintenance, regulation of flower development; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G31880.1); Has 55771 Blast hits to 55472 proteins in 1453 species: Archae - 44; Bacteria - 2468; Metazoa - 16951; Fungi - 4037; Plants - 25285; Viruses - 100; Other Eukaryotes - 6886 (source: NCBI BLink). & (gnl|cdd|36401 : 226.0) no description available & (q8lpb4|pskr_dauca : 162.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 131.0) no description available & (reliability: 860.0) & (original description: Putative CRN, Description = Inactive leucine-rich repeat receptor-like protein kinase CORYNE, PFAM = PF00069)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben044scf00038108ctg001_3165-5822' '(at3g19320 : 358.0) Leucine-rich repeat (LRR) family protein; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G49750.1); Has 128497 Blast hits to 47794 proteins in 2067 species: Archae - 184; Bacteria - 14728; Metazoa - 28641; Fungi - 6922; Plants - 61680; Viruses - 2227; Other Eukaryotes - 14115 (source: NCBI BLink). & (p93194|rpk1_iponi : 102.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 716.0) & (original description: Putative At4g06744, Description = Uncharacterized protein At4g06744, PFAM = PF13516)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben044scf00055094ctg003_1-2447' '(gnl|cdd|36401 : 195.0) no description available & (at1g79620 : 134.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G49760.1); Has 173131 Blast hits to 132948 proteins in 4769 species: Archae - 163; Bacteria - 18653; Metazoa - 51943; Fungi - 10632; Plants - 70309; Viruses - 438; Other Eukaryotes - 20993 (source: NCBI BLink). & (q8l4h4|nork_medtr : 117.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 109.0) no description available & (reliability: 248.0) & (original description: Putative At3g26700, Description = Putative leucine-rich repeat receptor-like protein kinase, PFAM = PF07714)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf00168_377573-379315' '(at3g56100 : 91.7) Protein kinase expressed in meristematic cells. Phosphorylates AGL24.; meristematic receptor-like kinase (MRLK); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: inflorescence meristem receptor-like kinase 2 (TAIR:AT3G51740.1); Has 154347 Blast hits to 110289 proteins in 3296 species: Archae - 124; Bacteria - 13554; Metazoa - 45622; Fungi - 8090; Plants - 69121; Viruses - 344; Other Eukaryotes - 17492 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative PGSC0003DMG400005590, Description = Receptor like protein 15, putative, PFAM = PF00560;PF00560)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf00168_379316-381272' '(at1g74170 : 115.0) receptor like protein 13 (RLP13); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 15 (TAIR:AT1G74190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 84.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 224.0) & (original description: Putative At1g74170, Description = Leucine-rich repeat-containing protein, PFAM = PF00560)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf00177_911277-919523' '(gnl|cdd|36401 : 267.0) no description available & (at5g40380 : 194.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (CRK42); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (TAIR:AT1G70530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29142 : 172.0) no description available & (o24585|cri4_maize : 158.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 374.0) & (original description: Putative Sb08g000610, Description = Putative uncharacterized protein Sb08g000610, PFAM = PF00069)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf00280_266928-270562' '(at3g19320 : 229.0) Leucine-rich repeat (LRR) family protein; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G49750.1); Has 128497 Blast hits to 47794 proteins in 2067 species: Archae - 184; Bacteria - 14728; Metazoa - 28641; Fungi - 6922; Plants - 61680; Viruses - 2227; Other Eukaryotes - 14115 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative PEX4, Description = Uncharacterized protein At4g06744 family, PFAM = )' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf00497_958270-963215' '(at5g13290 : 432.0) Encodes a protein with predicted Ser/Thr kinase activity and membrane localization that is involved in the CLV3 signaling pathway that represses WUS expression in the meristem. Loss of function of CRN can suppress the phenotype caused by overexpression of CLV3. SOL2 isolated as a suppressor of root- specific overexpression of CLE19, a clavata3 like gene. sol2 partially suppresses the short root phenotype caused by CLE19 overexpression. Mutant flowers have extra carpels.; CORYNE (CRN); FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: regulation of meristem growth, regulation of root meristem growth, meristem maintenance, regulation of flower development; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G31880.1); Has 55771 Blast hits to 55472 proteins in 1453 species: Archae - 44; Bacteria - 2468; Metazoa - 16951; Fungi - 4037; Plants - 25285; Viruses - 100; Other Eukaryotes - 6886 (source: NCBI BLink). & (gnl|cdd|36401 : 225.0) no description available & (q8lpb4|pskr_dauca : 162.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 131.0) no description available & (reliability: 864.0) & (original description: Putative CRN, Description = Inactive leucine-rich repeat receptor-like protein kinase CORYNE, PFAM = PF00069)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf00690_782855-787957' '(at5g06940 : 853.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: HAESA-like 1 (TAIR:AT1G28440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 308.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 243.0) no description available & (gnl|cdd|29142 : 143.0) no description available & (reliability: 1706.0) & (original description: Putative At5g06940, Description = Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940, PFAM = PF00069;PF13855;PF13855;PF08263)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf00766_98488-106690' '(at1g67840 : 551.0) Encodes a chloroplast sensor kinase (CSK) that shares common ancestors with cyanobacterial histidine sensor kinases. CSK is synthesised in the cytosol and imported into the chloroplast as a protein precusor. CSK is autophosphorylated and required for control of transcription of chloroplast genes by the redox state of an electron carrier connecting photosystems I and II.; chloroplast sensor kinase (CSK); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1102.0) & (original description: Putative CSK, Description = Chloroplast sensor kinase, chloroplastic, PFAM = )' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf00797_108675-112037' '(at1g22640 : 197.0) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression; myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (p10290|mybc_maize : 197.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (gnl|cdd|35271 : 186.0) no description available & (reliability: 364.0) & (original description: Putative MYB6, Description = MYB6, PFAM = PF00249;PF00249)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf01477_4451-13752' '(q8lkz1|nork_pea : 891.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (at1g67720 : 365.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G37050.3); Has 172111 Blast hits to 130582 proteins in 4641 species: Archae - 151; Bacteria - 14946; Metazoa - 47791; Fungi - 11011; Plants - 76783; Viruses - 518; Other Eukaryotes - 20911 (source: NCBI BLink). & (gnl|cdd|36401 : 352.0) no description available & (gnl|cdd|87344 : 159.0) no description available & (reliability: 730.0) & (original description: Putative NORK, Description = Nodulation receptor kinase, PFAM = PF12819;PF07714)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf01515_290476-294387' '(at5g13290 : 433.0) Encodes a protein with predicted Ser/Thr kinase activity and membrane localization that is involved in the CLV3 signaling pathway that represses WUS expression in the meristem. Loss of function of CRN can suppress the phenotype caused by overexpression of CLV3. SOL2 isolated as a suppressor of root- specific overexpression of CLE19, a clavata3 like gene. sol2 partially suppresses the short root phenotype caused by CLE19 overexpression. Mutant flowers have extra carpels.; CORYNE (CRN); FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: regulation of meristem growth, regulation of root meristem growth, meristem maintenance, regulation of flower development; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G31880.1); Has 55771 Blast hits to 55472 proteins in 1453 species: Archae - 44; Bacteria - 2468; Metazoa - 16951; Fungi - 4037; Plants - 25285; Viruses - 100; Other Eukaryotes - 6886 (source: NCBI BLink). & (gnl|cdd|36401 : 225.0) no description available & (q8lpb4|pskr_dauca : 160.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 129.0) no description available & (reliability: 866.0) & (original description: Putative CRN, Description = Inactive leucine-rich repeat receptor-like protein kinase CORYNE, PFAM = PF00069)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf01635_493585-499012' '(gnl|cdd|36401 : 364.0) no description available & (at1g52540 : 325.0) Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G15890.1); Has 98543 Blast hits to 97377 proteins in 3831 species: Archae - 68; Bacteria - 11032; Metazoa - 36701; Fungi - 6941; Plants - 30133; Viruses - 293; Other Eukaryotes - 13375 (source: NCBI BLink). & (q8l4h4|nork_medtr : 218.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 159.0) no description available & (reliability: 622.0) & (original description: Putative At3g15890, Description = PTI1-like tyrosine-protein kinase At3g15890, PFAM = PF00069)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf02289_730995-736384' '(at3g02130 : 1318.0) receptor-like protein kinase 2 (RPK2); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: lignin metabolic process, protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, pollen maturation, anther dehiscence; LOCATED IN: plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor-like protein kinase 1 (TAIR:AT1G69270.1); Has 212351 Blast hits to 140653 proteins in 4689 species: Archae - 161; Bacteria - 19257; Metazoa - 62611; Fungi - 11388; Plants - 92974; Viruses - 608; Other Eukaryotes - 25352 (source: NCBI BLink). & (gnl|cdd|36401 : 307.0) no description available & (p93194|rpk1_iponi : 231.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|29142 : 169.0) no description available & (reliability: 2636.0) & (original description: Putative RPK2, Description = LRR receptor-like serine/threonine-protein kinase RPK2, PFAM = PF08263;PF00069;PF13855;PF13855)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf02430_771495-774001' '(at5g01740 : 161.0) Nuclear transport factor 2 (NTF2) family protein; CONTAINS InterPro DOMAIN/s: Wound-induced protein, Wun1 (InterPro:IPR009798); BEST Arabidopsis thaliana protein match is: senescence associated gene 20 (TAIR:AT3G10985.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70566 : 109.0) no description available & (reliability: 322.0) & (original description: Putative , Description = Predicted protein, PFAM = PF07107)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf02583_533-4539' '(at2g37710 : 721.0) Induced in response to Salicylic acid.; receptor lectin kinase (RLK); FUNCTIONS IN: kinase activity; INVOLVED IN: response to salicylic acid stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G53810.1); Has 113290 Blast hits to 111820 proteins in 4637 species: Archae - 92; Bacteria - 13273; Metazoa - 41290; Fungi - 9298; Plants - 33316; Viruses - 357; Other Eukaryotes - 15664 (source: NCBI BLink). & (gnl|cdd|36401 : 324.0) no description available & (gnl|cdd|84552 : 270.0) no description available & (q8lpb4|pskr_dauca : 190.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1442.0) & (original description: Putative LECRK41, Description = L-type lectin-domain containing receptor kinase IV.1, PFAM = PF00069;PF00139)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf02603_135567-148742' '(at2g28250 : 596.0) NCRK; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G10620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 338.0) no description available & (q8l4h4|nork_medtr : 211.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|87344 : 160.0) no description available & (reliability: 1192.0) & (original description: Putative NCRK, Description = Receptor-like serine/threonine-protein kinase NCRK, PFAM = PF00069)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf02819_339428-346827' '(at1g52540 : 452.0) Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G15890.1); Has 98543 Blast hits to 97377 proteins in 3831 species: Archae - 68; Bacteria - 11032; Metazoa - 36701; Fungi - 6941; Plants - 30133; Viruses - 293; Other Eukaryotes - 13375 (source: NCBI BLink). & (gnl|cdd|36401 : 371.0) no description available & (q8lpb4|pskr_dauca : 233.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 166.0) no description available & (reliability: 878.0) & (original description: Putative At3g15890, Description = PTI1-like tyrosine-protein kinase At3g15890, PFAM = PF00069)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf02854_52242-56081' '(at5g37660 : 276.0) Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.; plasmodesmata-located protein 7 (PDLP7); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: plasmodesmata-located protein 6 (TAIR:AT2G01660.1); Has 1354 Blast hits to 1280 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1352; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 552.0) & (original description: Putative CRRSP60, Description = Cysteine-rich repeat secretory protein 60, PFAM = PF01657;PF01657)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf03009_480270-489669' '(at3g19320 : 295.0) Leucine-rich repeat (LRR) family protein; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G49750.1); Has 128497 Blast hits to 47794 proteins in 2067 species: Archae - 184; Bacteria - 14728; Metazoa - 28641; Fungi - 6922; Plants - 61680; Viruses - 2227; Other Eukaryotes - 14115 (source: NCBI BLink). & (p93194|rpk1_iponi : 89.4) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|37135 : 86.2) no description available & (reliability: 590.0) & (original description: Putative LRX3, Description = Uncharacterized protein At4g06744 family, PFAM = PF13516)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf03096_91958-94701' '(at3g22060 : 245.0) contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069, however this protein does not have the protein kinase domain; Receptor-like protein kinase-related family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: cell wall, vacuole; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF26) (TAIR:AT3G58310.1); Has 1682 Blast hits to 1490 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1682; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 490.0) & (original description: Putative CRRSP38, Description = Cysteine-rich repeat secretory protein 38, PFAM = PF01657;PF01657)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf03202_1212291-1216327' '(at5g01550 : 625.0) Encodes LecRKA4.2, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination.; lectin receptor kinase a4.1 (LECRKA4.2); FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: abscisic acid mediated signaling pathway, seed germination; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: lectin receptor kinase a4.3 (TAIR:AT5G01560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 308.0) no description available & (gnl|cdd|84552 : 260.0) no description available & (q8lpb4|pskr_dauca : 206.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1250.0) & (original description: Putative LECRK63, Description = Lectin-domain containing receptor kinase VI.3, PFAM = PF00069;PF00139)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf03304_166030-173041' '(at2g46850 : 563.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G23450.1); Has 23990 Blast hits to 23702 proteins in 525 species: Archae - 2; Bacteria - 138; Metazoa - 2283; Fungi - 196; Plants - 20657; Viruses - 25; Other Eukaryotes - 689 (source: NCBI BLink). & (gnl|cdd|36401 : 184.0) no description available & (q8l4h4|nork_medtr : 91.7) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1126.0) & (original description: Putative At2g46850, Description = Probably inactive receptor-like protein kinase At2g46850, PFAM = PF13947;PF07714)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf03427_562696-565712' '(at5g46080 : 288.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: crinkly4 (TAIR:AT3G59420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 228.0) no description available & (q8lpb4|pskr_dauca : 144.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 116.0) no description available & (reliability: 576.0) & (original description: Putative At5g46080, Description = Protein kinase family protein, PFAM = PF00069)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf03534_51831-55923' '(gnl|cdd|36401 : 273.0) no description available & (at4g02010 : 199.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G20300.1); Has 117558 Blast hits to 116281 proteins in 4412 species: Archae - 107; Bacteria - 13740; Metazoa - 43399; Fungi - 9953; Plants - 33036; Viruses - 373; Other Eukaryotes - 16950 (source: NCBI BLink). & (q8l4h4|nork_medtr : 191.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47550 : 155.0) no description available & (reliability: 370.0) & (original description: Putative pto, Description = Putative receptor-like protein kinase, PFAM = PF00069)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf03600_127211-131756' '(at3g01840 : 432.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G33580.1); Has 52720 Blast hits to 52395 proteins in 2921 species: Archae - 39; Bacteria - 3156; Metazoa - 18439; Fungi - 2605; Plants - 22696; Viruses - 193; Other Eukaryotes - 5592 (source: NCBI BLink). & (gnl|cdd|36401 : 232.0) no description available & (gnl|cdd|88314 : 126.0) no description available & (q8l4h4|nork_medtr : 118.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 864.0) & (original description: Putative LYK2, Description = Protein LYK2, PFAM = PF01476;PF00069)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf03965_367740-371126' '(p10290|mybc_maize : 195.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (at1g22640 : 193.0) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression; myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (gnl|cdd|35271 : 177.0) no description available & (reliability: 368.0) & (original description: Putative MYB6, Description = MYB6, PFAM = PF00249;PF00249)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf04103_444388-459499' '(at3g15610 : 480.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G52730.1); Has 43706 Blast hits to 23089 proteins in 800 species: Archae - 76; Bacteria - 7357; Metazoa - 15603; Fungi - 10314; Plants - 4879; Viruses - 0; Other Eukaryotes - 5477 (source: NCBI BLink). & (gnl|cdd|35499 : 450.0) no description available & (gnl|cdd|29257 : 145.0) no description available & (reliability: 918.0) & (original description: Putative strap, Description = Serine-threonine kinase receptor-associated protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf04161_18113-31037' '(at1g67720 : 1273.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G37050.3); Has 172111 Blast hits to 130582 proteins in 4641 species: Archae - 151; Bacteria - 14946; Metazoa - 47791; Fungi - 11011; Plants - 76783; Viruses - 518; Other Eukaryotes - 20911 (source: NCBI BLink). & (q8lkz1|nork_pea : 428.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|36401 : 340.0) no description available & (gnl|cdd|47549 : 164.0) no description available & (reliability: 2546.0) & (original description: Putative PGSC0003DMG400010746, Description = Putative LRR receptor-like serine/threonine-protein kinase, PFAM = PF00560;PF07714;PF12819)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf04400_398074-403442' '(at3g02130 : 981.0) receptor-like protein kinase 2 (RPK2); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: lignin metabolic process, protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, pollen maturation, anther dehiscence; LOCATED IN: plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor-like protein kinase 1 (TAIR:AT1G69270.1); Has 212351 Blast hits to 140653 proteins in 4689 species: Archae - 161; Bacteria - 19257; Metazoa - 62611; Fungi - 11388; Plants - 92974; Viruses - 608; Other Eukaryotes - 25352 (source: NCBI BLink). & (p93194|rpk1_iponi : 337.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 291.0) no description available & (gnl|cdd|29142 : 171.0) no description available & (reliability: 1962.0) & (original description: Putative RPK1, Description = LRR receptor-like serine/threonine-protein kinase RPK2, PFAM = PF08263;PF00069;PF12799;PF13855)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf05324_311581-320258' '(at1g67720 : 1286.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G37050.3); Has 172111 Blast hits to 130582 proteins in 4641 species: Archae - 151; Bacteria - 14946; Metazoa - 47791; Fungi - 11011; Plants - 76783; Viruses - 518; Other Eukaryotes - 20911 (source: NCBI BLink). & (q8lkz1|nork_pea : 440.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|36401 : 351.0) no description available & (gnl|cdd|47549 : 178.0) no description available & (reliability: 2572.0) & (original description: Putative At1g67720, Description = Probable LRR receptor-like serine/threonine-protein kinase At1g67720, PFAM = PF00560;PF12819;PF07714)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf06151_222049-230895' '(at3g05990 : 570.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G19230.1); Has 48781 Blast hits to 12236 proteins in 453 species: Archae - 4; Bacteria - 457; Metazoa - 323; Fungi - 23; Plants - 45747; Viruses - 0; Other Eukaryotes - 2227 (source: NCBI BLink). & (q8lkz1|nork_pea : 143.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 1140.0) & (original description: Putative glysoja_034372, Description = Putative LRR receptor-like serine/threonine-protein kinase, PFAM = PF08263;PF12819)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf06437_39165-42202' '(at4g10390 : 288.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to wounding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G33260.1); Has 108313 Blast hits to 107330 proteins in 4134 species: Archae - 96; Bacteria - 12123; Metazoa - 38925; Fungi - 9468; Plants - 31439; Viruses - 422; Other Eukaryotes - 15840 (source: NCBI BLink). & (gnl|cdd|36401 : 270.0) no description available & (q8l4h4|nork_medtr : 149.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|84488 : 142.0) no description available & (reliability: 576.0) & (original description: Putative At4g10390, Description = Probable receptor-like protein kinase At4g10390, PFAM = PF00069)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf06789_321071-327920' '(at3g05990 : 579.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G19230.1); Has 48781 Blast hits to 12236 proteins in 453 species: Archae - 4; Bacteria - 457; Metazoa - 323; Fungi - 23; Plants - 45747; Viruses - 0; Other Eukaryotes - 2227 (source: NCBI BLink). & (q8lkz1|nork_pea : 147.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 1158.0) & (original description: Putative BnaC05g45830D, Description = BnaC05g45830D protein, PFAM = PF08263;PF12819)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf07169_115388-118197' '(at3g49750 : 305.0) receptor like protein 44 (RLP44); INVOLVED IN: signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 57 (TAIR:AT5G65830.1); Has 65414 Blast hits to 15809 proteins in 634 species: Archae - 17; Bacteria - 2183; Metazoa - 2191; Fungi - 213; Plants - 57499; Viruses - 0; Other Eukaryotes - 3311 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative RLP57, Description = At5g65830, PFAM = PF13855)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf07278_162245-169535' '(at3g19300 : 704.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G49730.1); Has 120929 Blast hits to 119432 proteins in 4683 species: Archae - 125; Bacteria - 14225; Metazoa - 45087; Fungi - 10031; Plants - 33279; Viruses - 564; Other Eukaryotes - 17618 (source: NCBI BLink). & (gnl|cdd|36401 : 345.0) no description available & (q8l4h4|nork_medtr : 194.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|29142 : 171.0) no description available & (reliability: 1408.0) & (original description: Putative At1g49730, Description = Probable receptor-like protein kinase At1g49730, PFAM = PF00069)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf08873_172826-176838' '(at1g15530 : 753.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: carbohydrate binding, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: synergid, cultured cell; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Legume lectin, beta chain, Mn/Ca-binding site (InterPro:IPR019825); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT4G29050.1); Has 122402 Blast hits to 120886 proteins in 4615 species: Archae - 112; Bacteria - 13960; Metazoa - 45016; Fungi - 10521; Plants - 34601; Viruses - 479; Other Eukaryotes - 17713 (source: NCBI BLink). & (gnl|cdd|36401 : 315.0) no description available & (gnl|cdd|84552 : 218.0) no description available & (q8lpb4|pskr_dauca : 208.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1506.0) & (original description: Putative LECRKS1, Description = L-type lectin-domain containing receptor kinase S.1, PFAM = PF00139;PF00069)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf09654_149311-152559' '(at5g37660 : 262.0) Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.; plasmodesmata-located protein 7 (PDLP7); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: plasmodesmata-located protein 6 (TAIR:AT2G01660.1); Has 1354 Blast hits to 1280 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1352; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 524.0) & (original description: Putative CRRSP2, Description = Cysteine-rich repeat secretory protein 2, PFAM = PF01657;PF01657)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf09665_141894-145872' '(at3g60720 : 259.0) Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.; plasmodesmata-located protein 8 (PDLP8); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: plasmodesmata-located protein 6 (TAIR:AT2G01660.1); Has 1563 Blast hits to 1343 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 1557; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 518.0) & (original description: Putative CRRSP15, Description = Cysteine-rich repeat secretory protein 15, PFAM = PF01657;PF01657)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf10225_133261-137044' '(gnl|cdd|36401 : 347.0) no description available & (at1g52540 : 326.0) Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G15890.1); Has 98543 Blast hits to 97377 proteins in 3831 species: Archae - 68; Bacteria - 11032; Metazoa - 36701; Fungi - 6941; Plants - 30133; Viruses - 293; Other Eukaryotes - 13375 (source: NCBI BLink). & (q8lkz1|nork_pea : 235.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 161.0) no description available & (reliability: 640.0) & (original description: Putative At3g15890, Description = PTI1-like tyrosine-protein kinase At3g15890, PFAM = PF00069)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf11037_334349-337695' '(at5g20050 : 415.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-domain-2 5 (TAIR:AT4G32300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 297.0) no description available & (p17801|kpro_maize : 180.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|84488 : 153.0) no description available & (reliability: 830.0) & (original description: Putative At5g20050, Description = Probable receptor-like protein kinase At5g20050, PFAM = PF00069)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf11560_20679-24959' '(gnl|cdd|36401 : 335.0) no description available & (at5g54380 : 253.0) Encodes THESEUS1 (THE1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth.; THESEUS1 (THE1); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: hercules receptor kinase 1 (TAIR:AT3G46290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8l4h4|nork_medtr : 232.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 154.0) no description available & (reliability: 470.0) & (original description: Putative ANX1, Description = Receptor-like protein kinase THESEUS 1, PFAM = PF00069)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf12735_62825-68389' '(at3g02130 : 1318.0) receptor-like protein kinase 2 (RPK2); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: lignin metabolic process, protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, pollen maturation, anther dehiscence; LOCATED IN: plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor-like protein kinase 1 (TAIR:AT1G69270.1); Has 212351 Blast hits to 140653 proteins in 4689 species: Archae - 161; Bacteria - 19257; Metazoa - 62611; Fungi - 11388; Plants - 92974; Viruses - 608; Other Eukaryotes - 25352 (source: NCBI BLink). & (gnl|cdd|36401 : 308.0) no description available & (q8lpb4|pskr_dauca : 223.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|29142 : 169.0) no description available & (reliability: 2636.0) & (original description: Putative RPK2, Description = LRR receptor-like serine/threonine-protein kinase RPK2, PFAM = PF00560;PF08263;PF00069;PF13855;PF13855)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf13549_33078-37667' '(at3g21510 : 167.0) Encodes AHP1, one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).; histidine-containing phosphotransmitter 1 (AHP1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, phosphotransfer (Hpt) domain (InterPro:IPR008207); BEST Arabidopsis thaliana protein match is: histidine-containing phosphotransfer factor 5 (TAIR:AT1G03430.1); Has 358 Blast hits to 357 proteins in 69 species: Archae - 2; Bacteria - 42; Metazoa - 0; Fungi - 41; Plants - 268; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|39944 : 146.0) no description available & (q6vak4|hp1_orysa : 118.0) Histidine-containing phosphotransfer protein 1 (OsHP1) - Oryza sativa (Rice) & (reliability: 326.0) & (original description: Putative HPT5, Description = Histidine phosphotransfer protein HPT5, PFAM = PF01627)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf13926_100420-103808' '(at3g19320 : 395.0) Leucine-rich repeat (LRR) family protein; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G49750.1); Has 128497 Blast hits to 47794 proteins in 2067 species: Archae - 184; Bacteria - 14728; Metazoa - 28641; Fungi - 6922; Plants - 61680; Viruses - 2227; Other Eukaryotes - 14115 (source: NCBI BLink). & (p93194|rpk1_iponi : 114.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 790.0) & (original description: Putative At4g06744, Description = Uncharacterized protein At4g06744, PFAM = )' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf15077_90468-97224' '(at3g15610 : 543.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G52730.1); Has 43706 Blast hits to 23089 proteins in 800 species: Archae - 76; Bacteria - 7357; Metazoa - 15603; Fungi - 10314; Plants - 4879; Viruses - 0; Other Eukaryotes - 5477 (source: NCBI BLink). & (gnl|cdd|35499 : 510.0) no description available & (gnl|cdd|29257 : 158.0) no description available & (reliability: 1048.0) & (original description: Putative strap, Description = Serine-threonine kinase receptor-associated protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf15156_103574-108015' '(at3g21510 : 171.0) Encodes AHP1, one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).; histidine-containing phosphotransmitter 1 (AHP1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, phosphotransfer (Hpt) domain (InterPro:IPR008207); BEST Arabidopsis thaliana protein match is: histidine-containing phosphotransfer factor 5 (TAIR:AT1G03430.1); Has 358 Blast hits to 357 proteins in 69 species: Archae - 2; Bacteria - 42; Metazoa - 0; Fungi - 41; Plants - 268; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|39944 : 148.0) no description available & (q6vak4|hp1_orysa : 122.0) Histidine-containing phosphotransfer protein 1 (OsHP1) - Oryza sativa (Rice) & (reliability: 324.0) & (original description: Putative hpt7, Description = Putative histidine phosphotransfer protein 7, PFAM = PF01627)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf15393_79571-83083' '(at4g29990 : 306.0) Leucine-rich repeat transmembrane protein kinase protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, leaf whorl, root; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: FLG22-induced receptor-like kinase 1 (TAIR:AT2G19190.1); Has 171907 Blast hits to 132045 proteins in 5043 species: Archae - 136; Bacteria - 15038; Metazoa - 48082; Fungi - 11262; Plants - 76060; Viruses - 464; Other Eukaryotes - 20865 (source: NCBI BLink). & (q8lkz1|nork_pea : 82.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 588.0) & (original description: Putative Os05g0525400, Description = Os05g0525400 protein, PFAM = PF12819)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf16585_323347-326711' '(at1g33260 : 298.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G10390.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36401 : 276.0) no description available & (q8lkz1|nork_pea : 170.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|29142 : 154.0) no description available & (reliability: 596.0) & (original description: Putative At1g33260, Description = Probable receptor-like protein kinase At1g33260, PFAM = PF00069)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf17094_194180-199287' '(at5g06940 : 882.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: HAESA-like 1 (TAIR:AT1G28440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 325.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 245.0) no description available & (gnl|cdd|29142 : 142.0) no description available & (reliability: 1764.0) & (original description: Putative At5g06940, Description = Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940, PFAM = PF13855;PF13855;PF08263;PF00560;PF00069)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf21897_8224-12257' '(at5g01550 : 611.0) Encodes LecRKA4.2, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination.; lectin receptor kinase a4.1 (LECRKA4.2); FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: abscisic acid mediated signaling pathway, seed germination; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: lectin receptor kinase a4.3 (TAIR:AT5G01560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36401 : 313.0) no description available & (gnl|cdd|84552 : 255.0) no description available & (q8lpb4|pskr_dauca : 204.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1222.0) & (original description: Putative LECRK63, Description = Lectin-domain containing receptor kinase VI.3, PFAM = PF00069;PF00139)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf28115_68561-72558' '(at2g37710 : 695.0) Induced in response to Salicylic acid.; receptor lectin kinase (RLK); FUNCTIONS IN: kinase activity; INVOLVED IN: response to salicylic acid stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G53810.1); Has 113290 Blast hits to 111820 proteins in 4637 species: Archae - 92; Bacteria - 13273; Metazoa - 41290; Fungi - 9298; Plants - 33316; Viruses - 357; Other Eukaryotes - 15664 (source: NCBI BLink). & (gnl|cdd|36401 : 325.0) no description available & (gnl|cdd|84552 : 289.0) no description available & (q8lpb4|pskr_dauca : 189.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1390.0) & (original description: Putative LECRK41, Description = L-type lectin-domain containing receptor kinase IV.1, PFAM = PF00069;PF00139)' T '30.2.99' 'signalling.receptor kinases.misc' 'niben101scf34895_33028-36169' '(at3g23250 : 174.0) Member of the R2R3 factor gene family.; myb domain protein 15 (MYB15); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 13 (TAIR:AT1G06180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35271 : 172.0) no description available & (q7xbh4|myb4_orysa : 171.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 328.0) & (original description: Putative MYB72, Description = MYB-related transcription factor, PFAM = PF00249;PF00249)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold1545_25235-34994' '(at1g08450 : 536.0) Encodes one of three Arabidopsis calreticulins. In CRT-deficient mouse fibroblasts, this protein restores ER Ca2+ levels. Non-receptor component required for EFR-mediated immunity. Mutants show de-repressed anthocyanin accumulation in the presence of elf18, and EFR accumulation and signalling.; calreticulin 3 (CRT3); FUNCTIONS IN: unfolded protein binding, calcium ion binding; INVOLVED IN: in 6 processes; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P (InterPro:IPR009033), Calreticulin/calnexin (InterPro:IPR001580), Calreticulin/calnexin, conserved site (InterPro:IPR018124), Calreticulin (InterPro:IPR009169), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: calreticulin 1a (TAIR:AT1G56340.2). & (gnl|cdd|35893 : 417.0) no description available & (q40401|calr_nicpl : 413.0) Calreticulin precursor - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|84651 : 321.0) no description available & (reliability: 1072.0) & (original description: Putative CRT3, Description = Calreticulin-3, PFAM = PF00262;PF00262)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold1684_72848-83591' '(at1g53590 : 760.0) NTMC2T6.1; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G14590.2); Has 5916 Blast hits to 4916 proteins in 346 species: Archae - 2; Bacteria - 105; Metazoa - 3154; Fungi - 722; Plants - 1160; Viruses - 7; Other Eukaryotes - 766 (source: NCBI BLink). & (gnl|cdd|34643 : 138.0) no description available & (reliability: 1492.0) & (original description: Putative NTMC2T6.1, Description = C2 domain-containing protein At1g53590, PFAM = PF00168)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold1905_14200-18763' '(at3g16490 : 168.0) IQ-domain 26 (IQD26); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 27 (TAIR:AT1G51960.1); Has 778 Blast hits to 763 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 10; Plants - 755; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative IQD3, Description = Calmodulin-binding family protein, PFAM = PF00612;PF00612;PF13178)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold2188_54513-61387' '(at2g17890 : 781.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 16 (CPK16); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 18 (TAIR:AT4G36070.1); Has 126765 Blast hits to 124478 proteins in 3942 species: Archae - 195; Bacteria - 14619; Metazoa - 47448; Fungi - 14527; Plants - 27603; Viruses - 509; Other Eukaryotes - 21864 (source: NCBI BLink). & (p53681|crk_dauca : 424.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 364.0) no description available & (gnl|cdd|47550 : 260.0) no description available & (reliability: 1556.0) & (original description: Putative CPK28, Description = Calcium-dependent protein kinase 28, PFAM = PF00069;PF13499;PF13202)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold2583_49309-51911' '(q09011|cast_soltu : 204.0) Calcium-binding protein CAST - Solanum tuberosum (Potato) & (at4g20780 : 197.0) Calcium sensor involved in trichome branching.; calmodulin like 42 (CML42); FUNCTIONS IN: calcium ion binding; INVOLVED IN: trichome branching; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin like 43 (TAIR:AT5G44460.1); Has 15351 Blast hits to 11255 proteins in 1265 species: Archae - 0; Bacteria - 33; Metazoa - 5903; Fungi - 3155; Plants - 4145; Viruses - 2; Other Eukaryotes - 2113 (source: NCBI BLink). & (gnl|cdd|35250 : 101.0) no description available & (reliability: 394.0) & (original description: Putative CML24, Description = Calcium-binding protein CML42, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold4843_28313-32006' '(at4g14750 : 206.0) IQ-domain 19 (IQD19); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 26 (TAIR:AT3G16490.1); Has 2338 Blast hits to 1945 proteins in 201 species: Archae - 4; Bacteria - 168; Metazoa - 612; Fungi - 134; Plants - 1079; Viruses - 66; Other Eukaryotes - 275 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative IQD3, Description = Calmodulin-binding family protein, PFAM = PF00612;PF00612;PF13178)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold4915_1-12750' '(at2g27480 : 204.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G04170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35260 : 187.0) no description available & (reliability: 408.0) & (original description: Putative CML48, Description = Probable calcium-binding protein CML48, PFAM = PF00036;PF13202)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold6189_27012-39511' '(at5g28900 : 753.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, cytoplasm; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G28850.2); Has 645 Blast hits to 644 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 308; Fungi - 2; Plants - 148; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|37773 : 588.0) no description available & (reliability: 1506.0) & (original description: Putative B''BETA, Description = Serine/threonine protein phosphatase 2A regulatory subunit B''beta, PFAM = PF13202;PF13499)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold6944_30163-32750' '(at1g76650 : 114.0) calmodulin-like 38 (CML38); CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G76640.1). & (gnl|cdd|35250 : 104.0) no description available & (reliability: 228.0) & (original description: Putative CML38, Description = Calcium-binding protein CML38, PFAM = PF13833;PF13833)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold8001_27772-43945' '(at4g21820 : 788.0) binding;calmodulin binding; FUNCTIONS IN: calmodulin binding, binding; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Armadillo (InterPro:IPR000225), Calponin-like actin-binding (InterPro:IPR001715), Armadillo-type fold (InterPro:IPR016024), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin 2 (TAIR:AT5G43900.1); Has 3955 Blast hits to 2210 proteins in 242 species: Archae - 0; Bacteria - 4; Metazoa - 3047; Fungi - 265; Plants - 324; Viruses - 0; Other Eukaryotes - 315 (source: NCBI BLink). & (gnl|cdd|35387 : 314.0) no description available & (reliability: 1576.0) & (original description: Putative MTR_4g131940, Description = Abnormal spindle-like microcephaly-associated-like protein, putative, PFAM = PF00612;PF00612;PF00612;PF00612;PF00612;PF00612;PF00612;PF00612;PF00612;PF00612;PF00612;PF00612;PF00307;PF00514)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold8323_45108-50162' '(gnl|cdd|71325 : 98.4) no description available & (at5g62570 : 88.2) Calmodulin binding protein-like; FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT4G25800.2). & (reliability: 176.4) & (original description: Putative PGSC0003DMG400024478, Description = , PFAM = PF07887)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold8323_45428-50150' '(gnl|cdd|71325 : 98.0) no description available & (at5g62570 : 88.6) Calmodulin binding protein-like; FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT4G25800.2). & (reliability: 177.2) & (original description: Putative PGSC0003DMG400024478, Description = , PFAM = PF07887;PF07887)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold9378_31245-33747' '(at4g27280 : 100.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to karrikin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: pinoid-binding protein 1 (TAIR:AT5G54490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative PBP1, Description = Calcium-binding protein PBP1, PFAM = PF13833)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold10152_3261-11057' '(at1g53210 : 605.0) sodium/calcium exchanger family protein / calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: transmembrane transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, membrane, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Sodium/calcium exchanger membrane region (InterPro:IPR004837), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G29020.1); Has 622 Blast hits to 603 proteins in 166 species: Archae - 12; Bacteria - 69; Metazoa - 8; Fungi - 194; Plants - 285; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 1210.0) & (original description: Putative DcNCX1, Description = Sodium/calcium exchanger protein, PFAM = PF13499;PF01699;PF01699)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold11710_1433-6912' '(at4g34150 : 208.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: soybean gene regulated by cold-2 (TAIR:AT1G09070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36248 : 99.6) no description available & (reliability: 416.0) & (original description: Putative At4g34150, Description = AT4g34150/F28A23_90, PFAM = PF00168)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold12118_24674-32978' '(at5g12180 : 859.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 17 (CPK17); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of pollen tube growth, protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 34 (TAIR:AT5G19360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p53683|cdpk2_orysa : 680.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (gnl|cdd|35255 : 407.0) no description available & (gnl|cdd|29142 : 279.0) no description available & (reliability: 1718.0) & (original description: Putative CPK34, Description = Calcium-dependent protein kinase 34, PFAM = PF00069;PF13499;PF13499)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold12825_35095-38754' '(at2g17290 : 719.0) Encodes calcium dependent protein kinase 6 (CPK6), a member of the Arabidopsis CDPK gene family. CDPKs contain an intrinsic Ca2+-activation domain with four EF hand Ca2+-binding sites. CDPKs protein kinases have been proposed to function in multiple plant signal transduction pathways downstream of [Ca2+]cyt elevations, thus transducing various physiological responses. CPK6 is expressed in both guard cells and mesophyll cells. Functions in guard cell ion channel regulation. ABA and Ca(2+) activation of slow-type anion channels and, interestingly, ABA activation of plasma membrane Ca(2+)-permeable channels were impaired in independent alleles of single and double cpk3cpk6 mutant guard cells. Furthermore, ABA- and Ca(2+)-induced stomatal closing were partially impaired in these cpk3cpk6 mutant alleles. CPK3 is also a member of the Arabidopsis CDPK family.; calcium dependent protein kinase 6 (CPK6); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of anion channel activity, protein amino acid phosphorylation, N-terminal protein myristoylation, abscisic acid mediated signaling pathway, regulation of stomatal movement; LOCATED IN: cytosol, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calmodulin-domain protein kinase 5 (TAIR:AT4G35310.1); Has 133264 Blast hits to 125497 proteins in 3863 species: Archae - 149; Bacteria - 13464; Metazoa - 49073; Fungi - 17503; Plants - 30048; Viruses - 473; Other Eukaryotes - 22554 (source: NCBI BLink). & (p53684|cdpk3_orysa : 592.0) Calcium-dependent protein kinase, isoform 11 (EC 2.7.11.1) (CDPK 11) - Oryza sativa (Rice) & (gnl|cdd|35255 : 407.0) no description available & (gnl|cdd|29142 : 267.0) no description available & (reliability: 1438.0) & (original description: Putative CDPK2, Description = Calcium-dependent protein kinase 2, PFAM = PF00069;PF00036)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold16026_33878-37926' '(at5g13460 : 183.0) IQ-domain 11 (IQD11); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 12 (TAIR:AT5G03960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative IQD11, Description = Iq-domain 14, putative isoform 1, PFAM = PF00612;PF13178)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold16840_1877-9091' '(at5g66210 : 767.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p53681|crk_dauca : 439.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 371.0) no description available & (gnl|cdd|29142 : 261.0) no description available & (reliability: 1534.0) & (original description: Putative CPK16, Description = Calcium-dependent protein kinase 16, PFAM = PF13202;PF13499;PF00069)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold18594_772-8095' '(at5g62570 : 456.0) Calmodulin binding protein-like; FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT4G25800.2). & (gnl|cdd|71325 : 393.0) no description available & (reliability: 912.0) & (original description: Putative CBP60A, Description = Calmodulin-binding protein 60 A, PFAM = PF07887)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold19495_5340-20744' '(at3g18430 : 215.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: calmodulin 9 (TAIR:AT3G51920.1). & (gnl|cdd|35257 : 96.2) no description available & (reliability: 430.0) & (original description: Putative At3g18430, Description = Calcineurin b subunit (Protein phosphatase 2b regulatory subunit)-like protein, PFAM = PF13499)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold22341_1665-8700' '(at1g74690 : 228.0) IQ-domain 31 (IQD31); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 30 (TAIR:AT1G18840.2); Has 8498 Blast hits to 6418 proteins in 674 species: Archae - 21; Bacteria - 823; Metazoa - 3400; Fungi - 838; Plants - 1044; Viruses - 44; Other Eukaryotes - 2328 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative IQD31, Description = Protein IQ-DOMAIN 31, PFAM = PF13178;PF00612;PF00612)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold24187_4272-10245' '(gnl|cdd|71325 : 334.0) no description available & (at4g25800 : 307.0) Calmodulin-binding protein; FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT5G57580.1); Has 340 Blast hits to 325 proteins in 25 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 333; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 614.0) & (original description: Putative TCB60, Description = Calmodulin-binding protein, PFAM = PF07887)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold29378_1391-7341' '(at3g13460 : 577.0) Physically interacts with CIPK1.; evolutionarily conserved C-terminal region 2 (ECT2); FUNCTIONS IN: protein binding; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 4 (TAIR:AT1G55500.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37112 : 384.0) no description available & (gnl|cdd|67749 : 161.0) no description available & (reliability: 1154.0) & (original description: Putative ECT2, Description = AT3g13460/MRP15_10, PFAM = PF04146)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold30299_16907-22565' '(gnl|cdd|35425 : 564.0) no description available & (at3g21180 : 555.0) one of the type IIB calcium pump isoforms. encodes an autoinhibited Ca(2+)-ATPase that contains an N-terminal calmodulin binding autoinhibitory domain.; autoinhibited Ca(2+)-ATPase 9 (ACA9); FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: single fertilization, pollen development; LOCATED IN: plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type cation exchange, alpha subunit (InterPro:IPR006069), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: autoinhibited Ca2+ -ATPase, isoform 8 (TAIR:AT5G57110.2); Has 46757 Blast hits to 34166 proteins in 3170 species: Archae - 936; Bacteria - 32145; Metazoa - 4117; Fungi - 2726; Plants - 2106; Viruses - 3; Other Eukaryotes - 4724 (source: NCBI BLink). & (q2qmx9|aca1_orysa : 360.0) Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) - Oryza sativa (Rice) & (gnl|cdd|30822 : 253.0) no description available & (reliability: 1110.0) & (original description: Putative pca1, Description = Calcium-transporting ATPase, PFAM = PF00702;PF00689)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold33824_11570-19303' '(at5g37710 : 571.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity, calmodulin binding; INVOLVED IN: lipid catabolic process, lipid metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), Mono-/di-acylglycerol lipase, N-terminal (InterPro:IPR005592); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G49050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37299 : 283.0) no description available & (gnl|cdd|85661 : 94.2) no description available & (reliability: 1142.0) & (original description: Putative CaMBP, Description = Calmodulin-binding protein, PFAM = PF01764;PF03893)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold37908_12318-18930' '(at1g64850 : 177.0) Calcium-binding EF hand family protein; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37445.1); Has 71 Blast hits to 71 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative Sb06g027480, Description = Putative uncharacterized protein Sb06g027480, PFAM = )' T '30.3' 'signalling.calcium' 'nbv0.3scaffold41448_9271-15103' '(at3g13460 : 558.0) Physically interacts with CIPK1.; evolutionarily conserved C-terminal region 2 (ECT2); FUNCTIONS IN: protein binding; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 4 (TAIR:AT1G55500.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37112 : 358.0) no description available & (gnl|cdd|67749 : 162.0) no description available & (reliability: 1116.0) & (original description: Putative ECT2, Description = AT3g13460/MRP15_10, PFAM = PF04146)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold43371_7012-11354' '(gnl|cdd|71278 : 125.0) no description available & (at2g38800 : 112.0) Plant calmodulin-binding protein-related; CONTAINS InterPro DOMAIN/s: Calmodulin-binding protein, plant (InterPro:IPR012417); BEST Arabidopsis thaliana protein match is: Plant calmodulin-binding protein-related (TAIR:AT3G54570.1); Has 4321 Blast hits to 2381 proteins in 392 species: Archae - 26; Bacteria - 2334; Metazoa - 540; Fungi - 255; Plants - 198; Viruses - 28; Other Eukaryotes - 940 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative Zm.64915, Description = Plant calmodulin-binding-like protein, PFAM = PF07839)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold44292_7976-11877' '(at3g16490 : 247.0) IQ-domain 26 (IQD26); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 27 (TAIR:AT1G51960.1); Has 778 Blast hits to 763 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 10; Plants - 755; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 494.0) & (original description: Putative IQD3, Description = IQ-domain 21, putative isoform 1, PFAM = PF13178;PF00612;PF00612)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold44380_7171-13957' '(at3g52870 : 507.0) IQ calmodulin-binding motif family protein; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT3G58480.1); Has 341 Blast hits to 277 proteins in 58 species: Archae - 0; Bacteria - 26; Metazoa - 0; Fungi - 100; Plants - 209; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 1014.0) & (original description: Putative BnaA01g03820D, Description = BnaA01g03820D protein, PFAM = )' T '30.3' 'signalling.calcium' 'nbv0.3scaffold49110_10557-15522' '(q40401|calr_nicpl : 531.0) Calreticulin precursor - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09210 : 466.0) Encodes one of three Arabidopsis calreticulins.; calreticulin 1b (CRT1b); FUNCTIONS IN: unfolded protein binding, calcium ion binding; INVOLVED IN: response to oxidative stress, response to salt stress; LOCATED IN: mitochondrion, endoplasmic reticulum, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P (InterPro:IPR009033), Calreticulin/calnexin (InterPro:IPR001580), Calreticulin/calnexin, conserved site (InterPro:IPR018124), Calreticulin (InterPro:IPR009169), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: calreticulin 1a (TAIR:AT1G56340.1); Has 5507 Blast hits to 3456 proteins in 438 species: Archae - 6; Bacteria - 291; Metazoa - 2217; Fungi - 528; Plants - 416; Viruses - 176; Other Eukaryotes - 1873 (source: NCBI BLink). & (gnl|cdd|35893 : 429.0) no description available & (gnl|cdd|84651 : 246.0) no description available & (reliability: 932.0) & (original description: Putative calr, Description = Calreticulin, PFAM = PF00262;PF00262)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold51158_6920-13750' '(at3g15050 : 187.0) IQ-domain 10 (IQD10); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 9 (TAIR:AT2G33990.1); Has 647 Blast hits to 643 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 647; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative iqd9, Description = IQ-domain 9 protein, PFAM = PF00612)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold52740_2485-7203' '(at1g76040 : 750.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 29 (CPK29); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 21 (TAIR:AT4G04720.1); Has 142530 Blast hits to 132137 proteins in 3984 species: Archae - 133; Bacteria - 14530; Metazoa - 52901; Fungi - 18639; Plants - 31038; Viruses - 504; Other Eukaryotes - 24785 (source: NCBI BLink). & (p53683|cdpk2_orysa : 706.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (gnl|cdd|35255 : 380.0) no description available & (gnl|cdd|29142 : 270.0) no description available & (reliability: 1500.0) & (original description: Putative CPK29, Description = Calcium-dependent protein kinase 29, PFAM = PF13499;PF13499;PF00069)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold52957_11976-20225' '(at2g41140 : 868.0) Encodes CDPK-related kinase 1 (CRK1).; CDPK-related kinase 1 (CRK1); FUNCTIONS IN: calcium-dependent protein serine/threonine phosphatase activity, calmodulin-dependent protein kinase activity, kinase activity, calcium ion binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G56760.1); Has 116311 Blast hits to 114570 proteins in 3026 species: Archae - 154; Bacteria - 14640; Metazoa - 43033; Fungi - 12673; Plants - 24419; Viruses - 507; Other Eukaryotes - 20885 (source: NCBI BLink). & (p53681|crk_dauca : 757.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 353.0) no description available & (gnl|cdd|29142 : 265.0) no description available & (reliability: 1724.0) & (original description: Putative CRK1, Description = CDPK-related kinase 1, PFAM = PF00069)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold55134_6103-8132' '(at3g03000 : 206.0) Calmodulin like protein localized in the plant vacuolar compartment with a function of binding and modifying the activity of a tonoplast transporter (AtNHX1) from within the vacuole in a Ca+2- and pH-dependent manner; EF hand calcium-binding protein family; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G32250.1); Has 24706 Blast hits to 18078 proteins in 1578 species: Archae - 2; Bacteria - 105; Metazoa - 9402; Fungi - 6368; Plants - 5242; Viruses - 0; Other Eukaryotes - 3587 (source: NCBI BLink). & (gnl|cdd|35250 : 134.0) no description available & (gnl|cdd|34727 : 110.0) no description available & (p04352|calm_chlre : 107.0) Calmodulin (CaM) - Chlamydomonas reinhardtii & (reliability: 412.0) & (original description: Putative CML18, Description = Probable calcium-binding protein CML18, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold57228_4653-9659' '(at3g15050 : 197.0) IQ-domain 10 (IQD10); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 9 (TAIR:AT2G33990.1); Has 647 Blast hits to 643 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 647; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative iqd9, Description = IQ-domain 9 protein, PFAM = PF00612)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold66218_5024-7593' '(at5g39670 : 105.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G29000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative CML30, Description = Putative calcium-binding protein CML45-like, PFAM = PF13499)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold66695_1-2991' '(at3g52870 : 82.8) IQ calmodulin-binding motif family protein; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT3G58480.1); Has 341 Blast hits to 277 proteins in 58 species: Archae - 0; Bacteria - 26; Metazoa - 0; Fungi - 100; Plants - 209; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative IQM3, Description = IQ domain-containing protein IQM3, PFAM = )' T '30.3' 'signalling.calcium' 'nbv0.3scaffold68279_5205-8176' '(at2g26530 : 88.2) unknown function; AR781; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT2G15760.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|71256 : 86.7) no description available & (reliability: 174.0) & (original description: Putative PGSC0003DMG400007993, Description = Pheromone receptor-like protein, PFAM = PF07816)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold70189_537-5530' '(at1g05150 : 1178.0) Calcium-binding tetratricopeptide family protein; FUNCTIONS IN: binding, zinc ion binding, calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), EF-HAND 2 (InterPro:IPR018249), Zinc finger, ZZ-type (InterPro:IPR000433), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Calcium-binding tetratricopeptide family protein (TAIR:AT2G32450.1); Has 35451 Blast hits to 16647 proteins in 1701 species: Archae - 1586; Bacteria - 18304; Metazoa - 4207; Fungi - 680; Plants - 951; Viruses - 0; Other Eukaryotes - 9723 (source: NCBI BLink). & (gnl|cdd|39826 : 105.0) no description available & (reliability: 2356.0) & (original description: Putative Sb10g029770, Description = Putative uncharacterized protein Sb10g029770, PFAM = PF13414;PF13432;PF13432)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold70239_2450-7220' '(at5g03040 : 217.0) IQ-domain 2 (iqd2); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 1 (TAIR:AT3G09710.1). & (reliability: 434.0) & (original description: Putative pco155237, Description = Orphans transcription factor, PFAM = PF00612)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold74304_478-2796' '(at2g43290 : 138.0) Encodes calmodulin-like MSS3.; multicopy suppressors of snf4 deficiency in yeast 3 (MSS3); FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G59440.1); Has 26796 Blast hits to 17896 proteins in 1618 species: Archae - 9; Bacteria - 273; Metazoa - 11544; Fungi - 5684; Plants - 5303; Viruses - 2; Other Eukaryotes - 3981 (source: NCBI BLink). & (gnl|cdd|35250 : 118.0) no description available & (p04352|calm_chlre : 86.3) Calmodulin (CaM) - Chlamydomonas reinhardtii & (gnl|cdd|34727 : 81.1) no description available & (reliability: 276.0) & (original description: Putative CML3, Description = Calmodulin-like protein 3, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold78043_1746-7504' '(at3g17470 : 650.0) Ca2+-activated RelA/spot homolog (CRSH); FUNCTIONS IN: GTP diphosphokinase activity, calcium ion binding; INVOLVED IN: guanosine tetraphosphate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 3 (TAIR:AT1G54130.1); Has 14021 Blast hits to 13962 proteins in 3173 species: Archae - 6; Bacteria - 8120; Metazoa - 1259; Fungi - 992; Plants - 727; Viruses - 0; Other Eukaryotes - 2917 (source: NCBI BLink). & (gnl|cdd|36372 : 443.0) no description available & (gnl|cdd|30665 : 197.0) no description available & (reliability: 1300.0) & (original description: Putative CRSH, Description = Probable GTP diphosphokinase CRSH, chloroplastic, PFAM = PF13328;PF04607;PF13499)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold78578_1-4177' '(at5g62390 : 249.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. Localized to the ER. Necessary for the proper maintenance of the unfolded protein response during heat and cold tolerance.; BCL-2-associated athanogene 7 (BAG7); FUNCTIONS IN: protein binding, calmodulin binding; INVOLVED IN: protein folding, cellular response to unfolded protein, cellular response to cold, cellular response to heat; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); Has 7138 Blast hits to 4774 proteins in 502 species: Archae - 15; Bacteria - 776; Metazoa - 2268; Fungi - 700; Plants - 404; Viruses - 26; Other Eukaryotes - 2949 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative BAG7, Description = BAG family molecular chaperone regulator 7, PFAM = PF02179)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold87398_1223-5854' '(at5g03040 : 249.0) IQ-domain 2 (iqd2); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 1 (TAIR:AT3G09710.1). & (reliability: 498.0) & (original description: Putative iqd2, Description = Protein IQ-DOMAIN 1, PFAM = PF00612;PF13178)' T '30.3' 'signalling.calcium' 'nbv0.3scaffold97148_1546-4404' '(at2g27030 : 170.0) encodes a calmodulin that has higher affinity to kinesin-like calmodulin binding motor protein than CAM4 or CAM6.; calmodulin 5 (CAM5); FUNCTIONS IN: calcium ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 3 (TAIR:AT3G56800.1); Has 36011 Blast hits to 23475 proteins in 1766 species: Archae - 4; Bacteria - 234; Metazoa - 15635; Fungi - 7487; Plants - 7311; Viruses - 0; Other Eukaryotes - 5340 (source: NCBI BLink). & (p27164|calm3_pethy : 167.0) Calmodulin-related protein - Petunia hybrida (Petunia) & (gnl|cdd|35250 : 131.0) no description available & (gnl|cdd|34727 : 122.0) no description available & (reliability: 340.0) & (original description: Putative CML8, Description = Calmodulin-like protein 8, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold214_176975-181964' '(at3g58480 : 510.0) calmodulin-binding family protein; BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT3G13600.1); Has 404 Blast hits to 327 proteins in 76 species: Archae - 0; Bacteria - 22; Metazoa - 8; Fungi - 105; Plants - 225; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 1020.0) & (original description: Putative IQM6, Description = IQ domain-containing protein IQM6, PFAM = )' T '30.3' 'signalling.calcium' 'nbv0.5scaffold273_636132-655127' '(at5g28850 : 539.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G28900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37773 : 409.0) no description available & (reliability: 1078.0) & (original description: Putative P2R3B, Description = Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha, PFAM = PF13499)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold312_661611-667389' '(at5g24270 : 187.0) encodes a calcium sensor that is essential for K+ nutrition, K+/Na+ selectivity, and salt tolerance. The protein is similar to calcineurin B. Lines carrying recessive mutations are hypersensitive to Na+ and Li+ stresses and is unable to grow in low K+. The growth defect is rescued by extracellular calcium.; SALT OVERLY SENSITIVE 3 (SOS3); CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like protein 8 (TAIR:AT1G64480.1). & (gnl|cdd|35257 : 110.0) no description available & (reliability: 374.0) & (original description: Putative cBL9, Description = Calcineurin B-like protein 4-1, PFAM = PF00036;PF13202)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold372_762553-780647' '(at1g21630 : 681.0) Calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EPS15 homology (EH) (InterPro:IPR000261), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT1G20760.1). & (gnl|cdd|36216 : 133.0) no description available & (gnl|cdd|47376 : 91.1) no description available & (reliability: 1362.0) & (original description: Putative BnaC05g16920D, Description = BnaC05g16920D protein, PFAM = PF12763;PF13202)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold476_422673-428088' '(q40401|calr_nicpl : 531.0) Calreticulin precursor - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09210 : 466.0) Encodes one of three Arabidopsis calreticulins.; calreticulin 1b (CRT1b); FUNCTIONS IN: unfolded protein binding, calcium ion binding; INVOLVED IN: response to oxidative stress, response to salt stress; LOCATED IN: mitochondrion, endoplasmic reticulum, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P (InterPro:IPR009033), Calreticulin/calnexin (InterPro:IPR001580), Calreticulin/calnexin, conserved site (InterPro:IPR018124), Calreticulin (InterPro:IPR009169), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: calreticulin 1a (TAIR:AT1G56340.1); Has 5507 Blast hits to 3456 proteins in 438 species: Archae - 6; Bacteria - 291; Metazoa - 2217; Fungi - 528; Plants - 416; Viruses - 176; Other Eukaryotes - 1873 (source: NCBI BLink). & (gnl|cdd|35893 : 435.0) no description available & (gnl|cdd|84651 : 243.0) no description available & (reliability: 932.0) & (original description: Putative CAL1, Description = Calreticulin, PFAM = PF00262;PF00262)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold525_249433-254589' '(gnl|cdd|35425 : 499.0) no description available & (at3g63380 : 396.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: calcium ion transport, cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT3G22910.1); Has 46574 Blast hits to 34715 proteins in 3214 species: Archae - 909; Bacteria - 32032; Metazoa - 4086; Fungi - 2666; Plants - 2162; Viruses - 3; Other Eukaryotes - 4716 (source: NCBI BLink). & (gnl|cdd|30822 : 267.0) no description available & (q6atv4|aca2_orysa : 231.0) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (reliability: 792.0) & (original description: Putative , Description = , PFAM = PF00122;PF00689)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold529_478931-482987' '(at3g15050 : 172.0) IQ-domain 10 (IQD10); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 9 (TAIR:AT2G33990.1); Has 647 Blast hits to 643 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 647; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative iqd9, Description = IQ-domain 9 protein, PFAM = )' T '30.3' 'signalling.calcium' 'nbv0.5scaffold577_378831-389671' '(at1g74690 : 227.0) IQ-domain 31 (IQD31); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 30 (TAIR:AT1G18840.2); Has 8498 Blast hits to 6418 proteins in 674 species: Archae - 21; Bacteria - 823; Metazoa - 3400; Fungi - 838; Plants - 1044; Viruses - 44; Other Eukaryotes - 2328 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative IQD5, Description = IQ-domain 21, putative isoform 1, PFAM = PF00612;PF00612;PF13178)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold630_130321-135453' '(at2g17290 : 901.0) Encodes calcium dependent protein kinase 6 (CPK6), a member of the Arabidopsis CDPK gene family. CDPKs contain an intrinsic Ca2+-activation domain with four EF hand Ca2+-binding sites. CDPKs protein kinases have been proposed to function in multiple plant signal transduction pathways downstream of [Ca2+]cyt elevations, thus transducing various physiological responses. CPK6 is expressed in both guard cells and mesophyll cells. Functions in guard cell ion channel regulation. ABA and Ca(2+) activation of slow-type anion channels and, interestingly, ABA activation of plasma membrane Ca(2+)-permeable channels were impaired in independent alleles of single and double cpk3cpk6 mutant guard cells. Furthermore, ABA- and Ca(2+)-induced stomatal closing were partially impaired in these cpk3cpk6 mutant alleles. CPK3 is also a member of the Arabidopsis CDPK family.; calcium dependent protein kinase 6 (CPK6); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of anion channel activity, protein amino acid phosphorylation, N-terminal protein myristoylation, abscisic acid mediated signaling pathway, regulation of stomatal movement; LOCATED IN: cytosol, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calmodulin-domain protein kinase 5 (TAIR:AT4G35310.1); Has 133264 Blast hits to 125497 proteins in 3863 species: Archae - 149; Bacteria - 13464; Metazoa - 49073; Fungi - 17503; Plants - 30048; Viruses - 473; Other Eukaryotes - 22554 (source: NCBI BLink). & (p53684|cdpk3_orysa : 743.0) Calcium-dependent protein kinase, isoform 11 (EC 2.7.11.1) (CDPK 11) - Oryza sativa (Rice) & (gnl|cdd|35255 : 404.0) no description available & (gnl|cdd|29142 : 270.0) no description available & (reliability: 1802.0) & (original description: Putative CPK5, Description = Calcium-dependent protein kinase 5, PFAM = PF13499;PF13499;PF00069)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold642_303125-307254' '(at5g24270 : 275.0) encodes a calcium sensor that is essential for K+ nutrition, K+/Na+ selectivity, and salt tolerance. The protein is similar to calcineurin B. Lines carrying recessive mutations are hypersensitive to Na+ and Li+ stresses and is unable to grow in low K+. The growth defect is rescued by extracellular calcium.; SALT OVERLY SENSITIVE 3 (SOS3); CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like protein 8 (TAIR:AT1G64480.1). & (gnl|cdd|35257 : 146.0) no description available & (reliability: 550.0) & (original description: Putative cbl, Description = Calcineurin B-like molecule, PFAM = PF13833;PF13499)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold662_73764-76354' '(at5g39670 : 90.9) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G29000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative CML30, Description = Putative calcium-binding protein CML30, PFAM = PF13499)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold762_236430-238913' '(at1g50700 : 182.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 33 (CPK33); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calmodulin-domain protein kinase 9 (TAIR:AT3G20410.1); Has 135838 Blast hits to 127860 proteins in 4028 species: Archae - 164; Bacteria - 14368; Metazoa - 50670; Fungi - 18182; Plants - 28418; Viruses - 488; Other Eukaryotes - 23548 (source: NCBI BLink). & (p53683|cdpk2_orysa : 181.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (reliability: 364.0) & (original description: Putative cpk1, Description = Calcium-dependent protein kinase 3, PFAM = PF13499;PF13202)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold785_57291-69804' '(at3g20290 : 787.0) Encodes AtEHD1, one of the Arabidopsis Eps15 homology domain proteins involved in endocytosis (AtEHD2, At4g05520).; EPS15 homology domain 1 (EHD1); FUNCTIONS IN: GTP binding, GTPase activity, calcium ion binding; INVOLVED IN: endocytosis; LOCATED IN: endosome, microsome, membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EPS15 homology (EH) (InterPro:IPR000261), Dynamin, GTPase domain (InterPro:IPR001401), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: EPS15 homology domain 2 (TAIR:AT4G05520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37165 : 606.0) no description available & (gnl|cdd|84713 : 98.1) no description available & (reliability: 1574.0) & (original description: Putative EHD1, Description = EH domain-containing protein 1, PFAM = PF12763;PF16880;PF00350)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold842_119692-493041' '(at5g08580 : 118.0) Calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT4G27790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39424 : 90.8) no description available & (reliability: 236.0) & (original description: Putative At5g08580, Description = Calcium-binding EF hand family protein, PFAM = PF13499;PF13833)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold851_17919-41014' '(at4g04720 : 810.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 21 (CPK21); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 15 (TAIR:AT4G21940.1); Has 137194 Blast hits to 129287 proteins in 3977 species: Archae - 168; Bacteria - 14125; Metazoa - 50898; Fungi - 18038; Plants - 29874; Viruses - 499; Other Eukaryotes - 23592 (source: NCBI BLink). & (p53683|cdpk2_orysa : 800.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (gnl|cdd|35255 : 420.0) no description available & (gnl|cdd|29142 : 278.0) no description available & (reliability: 1620.0) & (original description: Putative CPK21, Description = Calcium-dependent protein kinase 21, PFAM = PF13499;PF13499;PF00069)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold994_320851-325208' '(at3g13600 : 316.0) calmodulin-binding family protein; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT3G58480.1); Has 2440 Blast hits to 1727 proteins in 273 species: Archae - 4; Bacteria - 163; Metazoa - 734; Fungi - 252; Plants - 308; Viruses - 55; Other Eukaryotes - 924 (source: NCBI BLink). & (reliability: 632.0) & (original description: Putative IQM1, Description = Calmodulin-binding family protein, PFAM = )' T '30.3' 'signalling.calcium' 'nbv0.5scaffold1125_133877-136368' '(at4g27280 : 145.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to karrikin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: pinoid-binding protein 1 (TAIR:AT5G54490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative ccd1, Description = EF-hand Ca2+-binding protein CCD1, PFAM = PF13833)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold1240_255702-268868' '(at5g56360 : 389.0) Encodes PSL4, beat-subunit of endoplasmic reticulum-resident glucosidase II, which is essential for stable accumulation and quality control of the elf18 receptor EFR but not the flg22 receptor FLS2.; PRIORITY IN SWEET LIFE 4 (PSL4); FUNCTIONS IN: calmodulin binding; INVOLVED IN: defense response to bacterium; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate receptor, binding (InterPro:IPR009011); BEST Arabidopsis thaliana protein match is: protein kinase C substrate, heavy chain-related (TAIR:AT2G42390.1); Has 58797 Blast hits to 35699 proteins in 2008 species: Archae - 449; Bacteria - 9679; Metazoa - 21420; Fungi - 7377; Plants - 2361; Viruses - 398; Other Eukaryotes - 17113 (source: NCBI BLink). & (gnl|cdd|37608 : 277.0) no description available & (reliability: 778.0) & (original description: Putative PSL4, Description = Glucosidase 2 subunit beta, PFAM = PF12999;PF13015)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold1501_251293-261487' '(at3g61050 : 606.0) NTMC2T4; FUNCTIONS IN: lipid binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: male gametophyte, cultured cell, callus, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G61030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34643 : 145.0) no description available & (reliability: 1212.0) & (original description: Putative BnaA07g18880D, Description = BnaA07g18880D protein, PFAM = PF00168;PF17047)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold1553_130931-137301' '(at3g61050 : 324.0) NTMC2T4; FUNCTIONS IN: lipid binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: male gametophyte, cultured cell, callus, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G61030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 648.0) & (original description: Putative NTMC2T4, Description = Integral membrane single C2 domain protein, PFAM = PF17047)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold1706_25-9031' '(p53683|cdpk2_orysa : 780.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (at4g04720 : 776.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 21 (CPK21); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 15 (TAIR:AT4G21940.1); Has 137194 Blast hits to 129287 proteins in 3977 species: Archae - 168; Bacteria - 14125; Metazoa - 50898; Fungi - 18038; Plants - 29874; Viruses - 499; Other Eukaryotes - 23592 (source: NCBI BLink). & (gnl|cdd|35255 : 407.0) no description available & (gnl|cdd|29142 : 271.0) no description available & (reliability: 1552.0) & (original description: Putative cpk1, Description = Calcium-dependent protein kinase, PFAM = PF13499;PF13499;PF00069)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold2184_7413-11768' '(at5g03040 : 254.0) IQ-domain 2 (iqd2); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 1 (TAIR:AT3G09710.1). & (reliability: 508.0) & (original description: Putative iqd2, Description = AT5g03040/F15A17_70, PFAM = PF00612;PF13178)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold2376_45511-90453' '(at5g12180 : 694.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 17 (CPK17); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of pollen tube growth, protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 34 (TAIR:AT5G19360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p53683|cdpk2_orysa : 554.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (gnl|cdd|35255 : 410.0) no description available & (gnl|cdd|29142 : 282.0) no description available & (reliability: 1388.0) & (original description: Putative cpk1, Description = Calcium-dependent protein kinase, PFAM = PF00036;PF00069)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold2951_205582-214840' '(at3g52870 : 498.0) IQ calmodulin-binding motif family protein; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT3G58480.1); Has 341 Blast hits to 277 proteins in 58 species: Archae - 0; Bacteria - 26; Metazoa - 0; Fungi - 100; Plants - 209; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 996.0) & (original description: Putative IQM3, Description = IQ domain-containing protein IQM3, PFAM = )' T '30.3' 'signalling.calcium' 'nbv0.5scaffold3379_175372-182349' '(at2g17890 : 786.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 16 (CPK16); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 18 (TAIR:AT4G36070.1); Has 126765 Blast hits to 124478 proteins in 3942 species: Archae - 195; Bacteria - 14619; Metazoa - 47448; Fungi - 14527; Plants - 27603; Viruses - 509; Other Eukaryotes - 21864 (source: NCBI BLink). & (p53681|crk_dauca : 429.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 367.0) no description available & (gnl|cdd|47550 : 269.0) no description available & (reliability: 1554.0) & (original description: Putative CPK16, Description = Calcium-dependent protein kinase 16, PFAM = PF00069;PF13499;PF13202)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold3721_200561-216748' '(at4g21820 : 815.0) binding;calmodulin binding; FUNCTIONS IN: calmodulin binding, binding; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Armadillo (InterPro:IPR000225), Calponin-like actin-binding (InterPro:IPR001715), Armadillo-type fold (InterPro:IPR016024), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin 2 (TAIR:AT5G43900.1); Has 3955 Blast hits to 2210 proteins in 242 species: Archae - 0; Bacteria - 4; Metazoa - 3047; Fungi - 265; Plants - 324; Viruses - 0; Other Eukaryotes - 315 (source: NCBI BLink). & (gnl|cdd|35387 : 317.0) no description available & (reliability: 1630.0) & (original description: Putative MTR_4g131940, Description = Abnormal spindle-like microcephaly-associated-like protein, putative, PFAM = PF00612;PF00612;PF00612;PF00612;PF00612;PF00612;PF00612;PF00612;PF00612;PF00612;PF00612;PF00612;PF00514;PF00307)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold4039_101836-108641' '(at4g34150 : 113.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: soybean gene regulated by cold-2 (TAIR:AT1G09070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative At4g34150, Description = AT4g34150/F28A23_90, PFAM = PF00168)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold4052_85596-91425' '(at3g13460 : 570.0) Physically interacts with CIPK1.; evolutionarily conserved C-terminal region 2 (ECT2); FUNCTIONS IN: protein binding; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 4 (TAIR:AT1G55500.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37112 : 378.0) no description available & (gnl|cdd|67749 : 162.0) no description available & (reliability: 1140.0) & (original description: Putative ECT2, Description = AT3g13460/MRP15_10, PFAM = PF04146)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold4547_91750-102642' '(at3g56690 : 863.0) encodes a protein similar to ATPases and binds to calmodulin in vitro. This is a single-copy gene and is expressed in all tissues examined.; Cam interacting protein 111 (CIP111); FUNCTIONS IN: ATPase activity, calmodulin binding; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 63578 Blast hits to 32942 proteins in 3240 species: Archae - 2541; Bacteria - 24762; Metazoa - 9322; Fungi - 6853; Plants - 5967; Viruses - 72; Other Eukaryotes - 14061 (source: NCBI BLink). & (gnl|cdd|35952 : 652.0) no description available & (q96372|cdc48_capan : 424.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (gnl|cdd|30812 : 290.0) no description available & (reliability: 1726.0) & (original description: Putative CIP111, Description = Calmodulin-interacting protein 111, PFAM = PF00004;PF00004)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold4580_36435-55293' '(at5g57110 : 1454.0) Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane.; "autoinhibited Ca2+ -ATPase, isoform 8" (ACA8); FUNCTIONS IN: protein self-association, calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: autoinhibited Ca(2+)-ATPase 10 (TAIR:AT4G29900.1); Has 45517 Blast hits to 34552 proteins in 3221 species: Archae - 872; Bacteria - 31142; Metazoa - 4022; Fungi - 2709; Plants - 2112; Viruses - 3; Other Eukaryotes - 4657 (source: NCBI BLink). & (gnl|cdd|35425 : 1419.0) no description available & (q2qmx9|aca1_orysa : 858.0) Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) - Oryza sativa (Rice) & (gnl|cdd|30822 : 621.0) no description available & (reliability: 2886.0) & (original description: Putative ACA8, Description = Calcium-transporting ATPase 8, plasma membrane-type, PFAM = PF00689;PF00122;PF00702;PF12515;PF00690)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold4932_62887-68468' '(gnl|cdd|68610 : 234.0) no description available & (at1g70680 : 194.0) Caleosin-related family protein; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: Caleosin-related family protein (TAIR:AT1G70670.1); Has 342 Blast hits to 337 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 281; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative PXG3, Description = Probable peroxygenase 3, PFAM = PF05042)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold5257_146869-153923' '(at1g05500 : 701.0) Encodes a endomembrane-localized synaptotagmin. Synaptotagmin family proteins are calcium sensors that regulate exocytosis in mammalian cells.; NTMC2T2.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT5G11100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34643 : 130.0) no description available & (gnl|cdd|36246 : 100.0) no description available & (reliability: 1354.0) & (original description: Putative SYT5, Description = Synaptotagmin-5, PFAM = PF17047;PF00168;PF00168)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold5978_28315-32008' '(at4g14750 : 181.0) IQ-domain 19 (IQD19); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 26 (TAIR:AT3G16490.1); Has 2338 Blast hits to 1945 proteins in 201 species: Archae - 4; Bacteria - 168; Metazoa - 612; Fungi - 134; Plants - 1079; Viruses - 66; Other Eukaryotes - 275 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative IQD5, Description = F3H7.10 protein, PFAM = PF13178)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold6724_88939-91544' '(q09011|cast_soltu : 235.0) Calcium-binding protein CAST - Solanum tuberosum (Potato) & (at4g20780 : 175.0) Calcium sensor involved in trichome branching.; calmodulin like 42 (CML42); FUNCTIONS IN: calcium ion binding; INVOLVED IN: trichome branching; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin like 43 (TAIR:AT5G44460.1); Has 15351 Blast hits to 11255 proteins in 1265 species: Archae - 0; Bacteria - 33; Metazoa - 5903; Fungi - 3155; Plants - 4145; Viruses - 2; Other Eukaryotes - 2113 (source: NCBI BLink). & (gnl|cdd|35250 : 97.4) no description available & (reliability: 350.0) & (original description: Putative CML21, Description = Calcium-binding protein CML42, PFAM = PF13405;PF13499)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold7254_53322-66355' '(at3g59820 : 793.0) LETM1-like protein; LOCATED IN: mitochondrion; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), LETM1-like (InterPro:IPR011685); BEST Arabidopsis thaliana protein match is: LETM1-like protein (TAIR:AT1G65540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36261 : 379.0) no description available & (gnl|cdd|87368 : 339.0) no description available & (reliability: 1586.0) & (original description: Putative cbp1, Description = Ca2+ binding protein cbp1, PFAM = PF07766)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold7635_54413-59103' '(at5g03040 : 209.0) IQ-domain 2 (iqd2); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 1 (TAIR:AT3G09710.1). & (reliability: 418.0) & (original description: Putative iqd2, Description = Protein IQ-DOMAIN 1, PFAM = PF00612;PF13178)' T '30.3' 'signalling.calcium' 'nbv0.5scaffold8765_24018-28671' '(at1g72670 : 239.0) IQ-domain 8 (iqd8); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 7 (TAIR:AT1G17480.1); Has 845 Blast hits to 839 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 13; Plants - 782; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 478.0) & (original description: Putative IQD5, Description = Calmodulin binding protein IQD22, PFAM = PF00612;PF00612)' T '30.3' 'signalling.calcium' 'niben044ctg26229140_2588-7115' '(gnl|cdd|68610 : 161.0) no description available & (at2g33380 : 146.0) Encodes a calcium binding protein whose mRNA is induced upon treatment with NaCl, ABA and in response to dessication. mRNA expression under drought conditions is apparent particularly in leaves and flowers. Isoform of caleosin with a role as a peroxygenase involved in oxylipin metabolism during biotic and abiotic stress.; RESPONSIVE TO DESSICATION 20 (RD20); FUNCTIONS IN: lipoxygenase activity, calcium ion binding; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast membrane, microsome, vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: caleosin-related family protein (TAIR:AT5G29560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative Clo1, Description = Calcium binding family protein, PFAM = PF05042)' T '30.3' 'signalling.calcium' 'niben044scf00000389ctg008_1-4068' '(at5g12480 : 639.0) calmodulin-domain protein kinase CDPK isoform 7 (CPK7); calmodulin-domain protein kinase 7 (CPK7); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 19 (TAIR:AT5G19450.2); Has 104543 Blast hits to 101042 proteins in 3590 species: Archae - 138; Bacteria - 12396; Metazoa - 40131; Fungi - 14132; Plants - 17107; Viruses - 370; Other Eukaryotes - 20269 (source: NCBI BLink). & (p53684|cdpk3_orysa : 452.0) Calcium-dependent protein kinase, isoform 11 (EC 2.7.11.1) (CDPK 11) - Oryza sativa (Rice) & (gnl|cdd|35255 : 404.0) no description available & (gnl|cdd|47550 : 279.0) no description available & (reliability: 1278.0) & (original description: Putative cpk1, Description = Calcium-dependent protein kinase, PFAM = PF00069)' T '30.3' 'signalling.calcium' 'niben044scf00000864ctg001_468-5284' '(at5g03040 : 270.0) IQ-domain 2 (iqd2); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 1 (TAIR:AT3G09710.1). & (reliability: 540.0) & (original description: Putative iqd2, Description = Protein IQ-DOMAIN 1, PFAM = PF00612)' T '30.3' 'signalling.calcium' 'niben044scf00000890ctg010_12152-15313' '(at1g74690 : 116.0) IQ-domain 31 (IQD31); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 30 (TAIR:AT1G18840.2); Has 8498 Blast hits to 6418 proteins in 674 species: Archae - 21; Bacteria - 823; Metazoa - 3400; Fungi - 838; Plants - 1044; Viruses - 44; Other Eukaryotes - 2328 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative , Description = IQ-domain 28, putative isoform 1, PFAM = PF13178)' T '30.3' 'signalling.calcium' 'niben044scf00000970ctg002_69669-80261' '(at1g27770 : 1617.0) Encodes a chloroplast envelope Ca2+-ATPase with an N-terminal autoinhibitor.; autoinhibited Ca2+-ATPase 1 (ACA1); FUNCTIONS IN: calcium channel activity, calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: cation transport, calcium ion transport, ATP biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, chloroplast inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type cation exchange, alpha subunit (InterPro:IPR006069), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: calcium ATPase 2 (TAIR:AT4G37640.1); Has 48793 Blast hits to 33205 proteins in 3149 species: Archae - 856; Bacteria - 30326; Metazoa - 5666; Fungi - 3781; Plants - 2732; Viruses - 4; Other Eukaryotes - 5428 (source: NCBI BLink). & (q2qmx9|aca1_orysa : 1588.0) Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) - Oryza sativa (Rice) & (gnl|cdd|35425 : 1417.0) no description available & (gnl|cdd|30822 : 577.0) no description available & (reliability: 3176.0) & (original description: Putative ACA1, Description = Calcium-transporting ATPase 1, chloroplastic, PFAM = PF13246;PF00702;PF12515;PF00122;PF00689;PF00690)' T '30.3' 'signalling.calcium' 'niben044scf00001703ctg022_2103-7291' '(at3g13460 : 558.0) Physically interacts with CIPK1.; evolutionarily conserved C-terminal region 2 (ECT2); FUNCTIONS IN: protein binding; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 4 (TAIR:AT1G55500.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37112 : 385.0) no description available & (gnl|cdd|67749 : 161.0) no description available & (reliability: 1116.0) & (original description: Putative BnaCnng01040D, Description = BnaCnng01040D protein, PFAM = PF04146)' T '30.3' 'signalling.calcium' 'niben044scf00001703ctg028_9344-15515' '(at3g13460 : 588.0) Physically interacts with CIPK1.; evolutionarily conserved C-terminal region 2 (ECT2); FUNCTIONS IN: protein binding; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 4 (TAIR:AT1G55500.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37112 : 370.0) no description available & (gnl|cdd|67749 : 162.0) no description available & (reliability: 1176.0) & (original description: Putative ECT2, Description = AT3g13460/MRP15_10, PFAM = PF04146)' T '30.3' 'signalling.calcium' 'niben044scf00001888ctg011_5236-9949' '(at5g03960 : 162.0) IQ-domain 12 (IQD12); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 11 (TAIR:AT5G13460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative BnaAnng00890D, Description = BnaAnng00890D protein, PFAM = PF13178;PF00612;PF00612)' T '30.3' 'signalling.calcium' 'niben044scf00002207ctg022_4377-6727' '(at4g27280 : 118.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to karrikin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: pinoid-binding protein 1 (TAIR:AT5G54490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative PBP1, Description = Calcium-binding protein PBP1, PFAM = PF13833)' T '30.3' 'signalling.calcium' 'niben044scf00002414ctg000_4992-10960' '(at5g24430 : 547.0) Calcium-dependent protein kinase (CDPK) family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Calcium-dependent protein kinase (CDPK) family protein (TAIR:AT3G49370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p53681|crk_dauca : 492.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 251.0) no description available & (gnl|cdd|29142 : 190.0) no description available & (reliability: 1094.0) & (original description: Putative CRK1, Description = CDPK-related protein kinase, PFAM = PF00069)' T '30.3' 'signalling.calcium' 'niben044scf00002714ctg003_11210-18366' '(at2g17890 : 833.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 16 (CPK16); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 18 (TAIR:AT4G36070.1); Has 126765 Blast hits to 124478 proteins in 3942 species: Archae - 195; Bacteria - 14619; Metazoa - 47448; Fungi - 14527; Plants - 27603; Viruses - 509; Other Eukaryotes - 21864 (source: NCBI BLink). & (p53681|crk_dauca : 450.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 369.0) no description available & (gnl|cdd|47550 : 265.0) no description available & (reliability: 1662.0) & (original description: Putative CPK16, Description = Calcium-dependent protein kinase 16, PFAM = PF00069;PF13833;PF13499)' T '30.3' 'signalling.calcium' 'niben044scf00003231ctg003_9163-21244' '(at5g56360 : 402.0) Encodes PSL4, beat-subunit of endoplasmic reticulum-resident glucosidase II, which is essential for stable accumulation and quality control of the elf18 receptor EFR but not the flg22 receptor FLS2.; PRIORITY IN SWEET LIFE 4 (PSL4); FUNCTIONS IN: calmodulin binding; INVOLVED IN: defense response to bacterium; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate receptor, binding (InterPro:IPR009011); BEST Arabidopsis thaliana protein match is: protein kinase C substrate, heavy chain-related (TAIR:AT2G42390.1); Has 58797 Blast hits to 35699 proteins in 2008 species: Archae - 449; Bacteria - 9679; Metazoa - 21420; Fungi - 7377; Plants - 2361; Viruses - 398; Other Eukaryotes - 17113 (source: NCBI BLink). & (gnl|cdd|37608 : 143.0) no description available & (reliability: 804.0) & (original description: Putative PSL4, Description = Glucosidase 2 subunit beta, PFAM = PF13015;PF12999)' T '30.3' 'signalling.calcium' 'niben044scf00003505ctg010_9843-11246' '(at3g25600 : 226.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family (TAIR:AT1G18530.1); Has 23107 Blast hits to 15210 proteins in 1505 species: Archae - 1; Bacteria - 136; Metazoa - 8522; Fungi - 5826; Plants - 5264; Viruses - 0; Other Eukaryotes - 3358 (source: NCBI BLink). & (gnl|cdd|35250 : 118.0) no description available & (p27164|calm3_pethy : 105.0) Calmodulin-related protein - Petunia hybrida (Petunia) & (gnl|cdd|34727 : 83.0) no description available & (reliability: 452.0) & (original description: Putative CML16, Description = Probable calcium-binding protein CML16, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben044scf00003854ctg013_5249-7838' '(at3g13460 : 125.0) Physically interacts with CIPK1.; evolutionarily conserved C-terminal region 2 (ECT2); FUNCTIONS IN: protein binding; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 4 (TAIR:AT1G55500.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative ECT2, Description = CIPK1 interacting protein ECT2, PFAM = )' T '30.3' 'signalling.calcium' 'niben044scf00004130ctg007_2220-8554' '(at3g59690 : 306.0) IQ-domain 13 (IQD13); FUNCTIONS IN: calmodulin binding; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 14 (TAIR:AT2G43680.1); Has 1694 Blast hits to 1201 proteins in 100 species: Archae - 0; Bacteria - 16; Metazoa - 93; Fungi - 40; Plants - 1224; Viruses - 44; Other Eukaryotes - 277 (source: NCBI BLink). & (reliability: 612.0) & (original description: Putative IQD13, Description = IQ-domain 3 isoform 2, PFAM = PF00612;PF13178)' T '30.3' 'signalling.calcium' 'niben044scf00006020ctg001_480-6247' '(at5g24270 : 225.0) encodes a calcium sensor that is essential for K+ nutrition, K+/Na+ selectivity, and salt tolerance. The protein is similar to calcineurin B. Lines carrying recessive mutations are hypersensitive to Na+ and Li+ stresses and is unable to grow in low K+. The growth defect is rescued by extracellular calcium.; SALT OVERLY SENSITIVE 3 (SOS3); CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like protein 8 (TAIR:AT1G64480.1). & (gnl|cdd|35257 : 128.0) no description available & (reliability: 450.0) & (original description: Putative CBL5, Description = CBL protein, PFAM = PF00036;PF13202;PF13202)' T '30.3' 'signalling.calcium' 'niben044scf00006355ctg006_249-5951' '(at2g31500 : 674.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 24 (CPK24); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 19 (TAIR:AT5G19450.2); Has 123765 Blast hits to 119993 proteins in 3778 species: Archae - 168; Bacteria - 14541; Metazoa - 46326; Fungi - 15514; Plants - 24284; Viruses - 457; Other Eukaryotes - 22475 (source: NCBI BLink). & (p49101|cdpk2_maize : 456.0) Calcium-dependent protein kinase 2 (EC 2.7.11.1) (CDPK 2) - Zea mays (Maize) & (gnl|cdd|35255 : 379.0) no description available & (gnl|cdd|29142 : 282.0) no description available & (reliability: 1348.0) & (original description: Putative CPK24, Description = Calcium-dependent protein kinase 24, PFAM = PF13499;PF00069;PF13202)' T '30.3' 'signalling.calcium' 'niben044scf00006808ctg009_13451-15780' '(at1g24620 : 81.6) EF hand calcium-binding protein family; FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to cold; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G18210.2); Has 28159 Blast hits to 18576 proteins in 1591 species: Archae - 2; Bacteria - 225; Metazoa - 10723; Fungi - 6999; Plants - 5954; Viruses - 2; Other Eukaryotes - 4254 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative CML25, Description = Calcium-binding EF-hand, PFAM = PF13499)' T '30.3' 'signalling.calcium' 'niben044scf00007435ctg011_10174-13573' '(at2g15760 : 132.0) Protein of unknown function (DUF1645); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT2G26530.2); Has 171 Blast hits to 167 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|71256 : 82.5) no description available & (reliability: 264.0) & (original description: Putative At2g15760, Description = At2g15760, PFAM = PF07816)' T '30.3' 'signalling.calcium' 'niben044scf00008083ctg016_1-9191' '(at3g22190 : 209.0) IQ-domain 5 (IQD5); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 6 (TAIR:AT2G26180.1). & (reliability: 418.0) & (original description: Putative IQD5, Description = Protein IQ-domain 5, PFAM = PF00612)' T '30.3' 'signalling.calcium' 'niben044scf00008518ctg005_5484-8047' '(at5g39670 : 100.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G29000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative CML30, Description = Putative calcium-binding protein CML45-like, PFAM = PF13499)' T '30.3' 'signalling.calcium' 'niben044scf00009588ctg002_9421-15518' '(at3g49050 : 574.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity, calmodulin binding; INVOLVED IN: lipid catabolic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), Mono-/di-acylglycerol lipase, N-terminal (InterPro:IPR005592); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G00500.2); Has 551 Blast hits to 551 proteins in 136 species: Archae - 0; Bacteria - 6; Metazoa - 153; Fungi - 88; Plants - 205; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (gnl|cdd|37299 : 308.0) no description available & (gnl|cdd|73213 : 109.0) no description available & (reliability: 1148.0) & (original description: Putative BnaC03g32080D, Description = BnaC03g32080D protein, PFAM = PF03893;PF01764)' T '30.3' 'signalling.calcium' 'niben044scf00009706ctg001_3464-11417' '(at5g37710 : 625.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity, calmodulin binding; INVOLVED IN: lipid catabolic process, lipid metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), Mono-/di-acylglycerol lipase, N-terminal (InterPro:IPR005592); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G49050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37299 : 316.0) no description available & (gnl|cdd|85661 : 95.8) no description available & (reliability: 1250.0) & (original description: Putative At5g37710, Description = Lipase class 3 family protein / putative calmodulin-binding heat-shock protein, PFAM = PF03893;PF01764)' T '30.3' 'signalling.calcium' 'niben044scf00010232ctg030_1-9783' '(at5g04220 : 590.0) SYTC; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: synaptotagmin A (TAIR:AT2G20990.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34643 : 168.0) no description available & (gnl|cdd|36246 : 91.4) no description available & (reliability: 1180.0) & (original description: Putative SYT3, Description = Synaptotagmin-3, PFAM = PF17047;PF00168;PF00168)' T '30.3' 'signalling.calcium' 'niben044scf00010331ctg006_19941-22428' '(at3g20410 : 152.0) calmodulin-domain protein kinase CDPK isoform 9 (CPK9); calmodulin-domain protein kinase 9 (CPK9); FUNCTIONS IN: calmodulin-dependent protein kinase activity, kinase activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 33 (TAIR:AT1G50700.1); Has 135370 Blast hits to 127423 proteins in 3989 species: Archae - 163; Bacteria - 13987; Metazoa - 51029; Fungi - 18072; Plants - 28065; Viruses - 501; Other Eukaryotes - 23553 (source: NCBI BLink). & (p53683|cdpk2_orysa : 152.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (reliability: 304.0) & (original description: Putative cpk1, Description = Calcium-dependent protein kinase 3, PFAM = PF13499)' T '30.3' 'signalling.calcium' 'niben044scf00010738ctg005_972-10485' '(at5g07300 : 719.0) Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms.; BONZAI 2 (BON2); FUNCTIONS IN: calcium-dependent phospholipid binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36541 : 493.0) no description available & (gnl|cdd|29232 : 302.0) no description available & (reliability: 1438.0) & (original description: Putative BON2, Description = Protein BONZAI 2, PFAM = PF07002;PF00168;PF00168)' T '30.3' 'signalling.calcium' 'niben044scf00011240ctg004_11546-17974' '(at3g20290 : 742.0) Encodes AtEHD1, one of the Arabidopsis Eps15 homology domain proteins involved in endocytosis (AtEHD2, At4g05520).; EPS15 homology domain 1 (EHD1); FUNCTIONS IN: GTP binding, GTPase activity, calcium ion binding; INVOLVED IN: endocytosis; LOCATED IN: endosome, microsome, membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EPS15 homology (EH) (InterPro:IPR000261), Dynamin, GTPase domain (InterPro:IPR001401), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: EPS15 homology domain 2 (TAIR:AT4G05520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37165 : 585.0) no description available & (gnl|cdd|84713 : 96.9) no description available & (reliability: 1484.0) & (original description: Putative EHD1, Description = EH domain-containing protein 1, PFAM = PF00350;PF16880)' T '30.3' 'signalling.calcium' 'niben044scf00011316ctg006_127-6861' '(at5g56360 : 185.0) Encodes PSL4, beat-subunit of endoplasmic reticulum-resident glucosidase II, which is essential for stable accumulation and quality control of the elf18 receptor EFR but not the flg22 receptor FLS2.; PRIORITY IN SWEET LIFE 4 (PSL4); FUNCTIONS IN: calmodulin binding; INVOLVED IN: defense response to bacterium; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate receptor, binding (InterPro:IPR009011); BEST Arabidopsis thaliana protein match is: protein kinase C substrate, heavy chain-related (TAIR:AT2G42390.1); Has 58797 Blast hits to 35699 proteins in 2008 species: Archae - 449; Bacteria - 9679; Metazoa - 21420; Fungi - 7377; Plants - 2361; Viruses - 398; Other Eukaryotes - 17113 (source: NCBI BLink). & (gnl|cdd|37608 : 182.0) no description available & (reliability: 370.0) & (original description: Putative GLU2B, Description = GLU2B, PFAM = PF12999)' T '30.3' 'signalling.calcium' 'niben044scf00011316ctg007_1-6325' '(at5g56360 : 223.0) Encodes PSL4, beat-subunit of endoplasmic reticulum-resident glucosidase II, which is essential for stable accumulation and quality control of the elf18 receptor EFR but not the flg22 receptor FLS2.; PRIORITY IN SWEET LIFE 4 (PSL4); FUNCTIONS IN: calmodulin binding; INVOLVED IN: defense response to bacterium; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate receptor, binding (InterPro:IPR009011); BEST Arabidopsis thaliana protein match is: protein kinase C substrate, heavy chain-related (TAIR:AT2G42390.1); Has 58797 Blast hits to 35699 proteins in 2008 species: Archae - 449; Bacteria - 9679; Metazoa - 21420; Fungi - 7377; Plants - 2361; Viruses - 398; Other Eukaryotes - 17113 (source: NCBI BLink). & (gnl|cdd|37608 : 113.0) no description available & (reliability: 446.0) & (original description: Putative PSL4, Description = Glucosidase 2 subunit beta, PFAM = PF13015)' T '30.3' 'signalling.calcium' 'niben044scf00011660ctg002_683-7092' '(at3g59690 : 202.0) IQ-domain 13 (IQD13); FUNCTIONS IN: calmodulin binding; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 14 (TAIR:AT2G43680.1); Has 1694 Blast hits to 1201 proteins in 100 species: Archae - 0; Bacteria - 16; Metazoa - 93; Fungi - 40; Plants - 1224; Viruses - 44; Other Eukaryotes - 277 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative , Description = ARAD1A13222p, PFAM = PF13178)' T '30.3' 'signalling.calcium' 'niben044scf00011683ctg019_20133-23312' '(at2g15760 : 145.0) Protein of unknown function (DUF1645); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT2G26530.2); Has 171 Blast hits to 167 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|71256 : 82.1) no description available & (reliability: 290.0) & (original description: Putative At2g15760, Description = Pheromone receptor-like protein, PFAM = PF07816)' T '30.3' 'signalling.calcium' 'niben044scf00013033ctg009_4115-10391' '(gnl|cdd|71325 : 381.0) no description available & (at1g73805 : 379.0) Calmodulin binding protein-like; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT5G57580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 758.0) & (original description: Putative BnaA07g22510D, Description = BnaA07g22510D protein, PFAM = PF07887)' T '30.3' 'signalling.calcium' 'niben044scf00015198ctg004_4099-12762' '(at5g57580 : 511.0) Calmodulin-binding protein; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT4G25800.2); Has 341 Blast hits to 322 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 339; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|71325 : 246.0) no description available & (reliability: 1022.0) & (original description: Putative TCB60, Description = Calmodulin-binding protein, PFAM = PF07887;PF07887)' T '30.3' 'signalling.calcium' 'niben044scf00015928ctg008_1-7578' '(at4g28600 : 690.0) encodes a calmodulin-binding protein that is expressed in pollen, suspension culture cells, flowers, and fruits.; no pollen germination related 2 (NPGR2); FUNCTIONS IN: calmodulin binding; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT2G43040.1); Has 2060 Blast hits to 1763 proteins in 357 species: Archae - 278; Bacteria - 547; Metazoa - 329; Fungi - 78; Plants - 247; Viruses - 0; Other Eukaryotes - 581 (source: NCBI BLink). & (gnl|cdd|39364 : 506.0) no description available & (reliability: 1380.0) & (original description: Putative NPG, Description = At2g43040, PFAM = PF13181)' T '30.3' 'signalling.calcium' 'niben044scf00015944ctg013_28180-33235' '(at4g17615 : 331.0) Member of AtCBL (Calcineurin B-like Calcium Sensor Proteins) family. Protein level is increased upon high salt, mannitol, and cold stresses. CBL1 interacts with CIPK23 and recruits the kinase to the plasma membrane where the substrate(s) of CIPK23 may reside. CBL1 localization is regulated by protein modification including myristolation and acylation.; calcineurin B-like protein 1 (CBL1); FUNCTIONS IN: calcium ion binding; INVOLVED IN: in 8 processes; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like protein 9 (TAIR:AT5G47100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35257 : 155.0) no description available & (reliability: 662.0) & (original description: Putative CBL1, Description = Calcineurin B-like protein 1, PFAM = PF13499)' T '30.3' 'signalling.calcium' 'niben044scf00015967ctg001_1-3145' '(at3g29310 : 94.0) calmodulin-binding protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 948 Blast hits to 846 proteins in 195 species: Archae - 0; Bacteria - 37; Metazoa - 375; Fungi - 99; Plants - 124; Viruses - 14; Other Eukaryotes - 299 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative)' T '30.3' 'signalling.calcium' 'niben044scf00016602ctg009_4479-11763' '(at1g74690 : 213.0) IQ-domain 31 (IQD31); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 30 (TAIR:AT1G18840.2); Has 8498 Blast hits to 6418 proteins in 674 species: Archae - 21; Bacteria - 823; Metazoa - 3400; Fungi - 838; Plants - 1044; Viruses - 44; Other Eukaryotes - 2328 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative IQD5, Description = F3H7.10 protein, PFAM = PF13178;PF00612;PF00612)' T '30.3' 'signalling.calcium' 'niben044scf00018254ctg000_25672-28536' '(at2g15760 : 105.0) Protein of unknown function (DUF1645); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT2G26530.2); Has 171 Blast hits to 167 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative , Description = , PFAM = PF07816)' T '30.3' 'signalling.calcium' 'niben044scf00019041ctg009_1-6084' '(at2g27480 : 95.1) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G04170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35260 : 89.2) no description available & (reliability: 190.2) & (original description: Putative plp, Description = Calcium-binding EF-hand protein, PFAM = )' T '30.3' 'signalling.calcium' 'niben044scf00019431ctg018_18495-28530' '(at1g05500 : 797.0) Encodes a endomembrane-localized synaptotagmin. Synaptotagmin family proteins are calcium sensors that regulate exocytosis in mammalian cells.; NTMC2T2.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT5G11100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34643 : 128.0) no description available & (gnl|cdd|36246 : 102.0) no description available & (reliability: 1436.0) & (original description: Putative SYT5, Description = Synaptotagmin-5, PFAM = PF00168;PF00168;PF17047)' T '30.3' 'signalling.calcium' 'niben044scf00019536ctg006_35351-44447' '(at3g13460 : 383.0) Physically interacts with CIPK1.; evolutionarily conserved C-terminal region 2 (ECT2); FUNCTIONS IN: protein binding; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 4 (TAIR:AT1G55500.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37112 : 351.0) no description available & (gnl|cdd|67749 : 157.0) no description available & (reliability: 766.0) & (original description: Putative BnaCnng23940D, Description = BnaCnng23940D protein, PFAM = PF04146)' T '30.3' 'signalling.calcium' 'niben044scf00019673ctg008_2795-5490' '(at1g76650 : 115.0) calmodulin-like 38 (CML38); CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G76640.1). & (gnl|cdd|35250 : 103.0) no description available & (reliability: 230.0) & (original description: Putative CML38, Description = Calcium-binding protein CML38, PFAM = PF13833;PF13833)' T '30.3' 'signalling.calcium' 'niben044scf00020271ctg000_876-6872' '(at5g57580 : 636.0) Calmodulin-binding protein; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT4G25800.2); Has 341 Blast hits to 322 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 339; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|71325 : 468.0) no description available & (reliability: 1272.0) & (original description: Putative CBP60B, Description = Calmodulin-binding protein 60 B, PFAM = PF07887)' T '30.3' 'signalling.calcium' 'niben044scf00020434ctg003_1-4542' '(at3g59820 : 508.0) LETM1-like protein; LOCATED IN: mitochondrion; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), LETM1-like (InterPro:IPR011685); BEST Arabidopsis thaliana protein match is: LETM1-like protein (TAIR:AT1G65540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36261 : 292.0) no description available & (gnl|cdd|87368 : 261.0) no description available & (reliability: 1016.0) & (original description: Putative cbp1, Description = LETM1 and EF-hand domain-containing protein 1, mitochondrial, PFAM = PF07766)' T '30.3' 'signalling.calcium' 'niben044scf00021117ctg018_6343-13593' '(at1g19870 : 260.0) IQ-domain 32 (iqd32); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 31 (TAIR:AT1G74690.1); Has 9103 Blast hits to 6594 proteins in 683 species: Archae - 22; Bacteria - 1108; Metazoa - 3792; Fungi - 1037; Plants - 1107; Viruses - 33; Other Eukaryotes - 2004 (source: NCBI BLink). & (reliability: 520.0) & (original description: Putative TCM_034188, Description = Iq-domain 32, putative isoform 3, PFAM = PF13178;PF00612;PF00612)' T '30.3' 'signalling.calcium' 'niben044scf00021408ctg019_7249-12615' '(at1g01110 : 258.0) IQ-domain 18 (IQD18); FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 17 (TAIR:AT4G00820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 516.0) & (original description: Putative IQD22, Description = Calmodulin binding protein IQD22, PFAM = PF13178;PF00612;PF00612)' T '30.3' 'signalling.calcium' 'niben044scf00021897ctg001_12086-17952' '(at4g26570 : 370.0) member of AtCBLs (Calcineurin B-like Calcium Sensor Proteins); calcineurin B-like 3 (CBL3); FUNCTIONS IN: calcium ion binding; INVOLVED IN: detection of calcium ion; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like protein 2 (TAIR:AT5G55990.1); Has 7988 Blast hits to 7953 proteins in 833 species: Archae - 0; Bacteria - 10; Metazoa - 3891; Fungi - 1253; Plants - 1902; Viruses - 0; Other Eukaryotes - 932 (source: NCBI BLink). & (gnl|cdd|35257 : 175.0) no description available & (reliability: 740.0) & (original description: Putative CBL3, Description = Calcineurin B-like protein 3, PFAM = PF13499;PF13833)' T '30.3' 'signalling.calcium' 'niben044scf00022363ctg005_2944-7971' '(at3g58480 : 517.0) calmodulin-binding family protein; BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT3G13600.1); Has 404 Blast hits to 327 proteins in 76 species: Archae - 0; Bacteria - 22; Metazoa - 8; Fungi - 105; Plants - 225; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 1034.0) & (original description: Putative IQM6, Description = IQ domain-containing protein IQM6, PFAM = )' T '30.3' 'signalling.calcium' 'niben044scf00022704ctg018_414-4751' '(at5g13460 : 184.0) IQ-domain 11 (IQD11); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 12 (TAIR:AT5G03960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative IQD11, Description = Iq-domain 14, putative isoform 1, PFAM = PF13178;PF00612)' T '30.3' 'signalling.calcium' 'niben044scf00022880ctg006_12029-14725' '(at3g10190 : 156.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT2G41410.1); Has 18786 Blast hits to 12756 proteins in 1414 species: Archae - 1; Bacteria - 149; Metazoa - 7817; Fungi - 3299; Plants - 4581; Viruses - 0; Other Eukaryotes - 2939 (source: NCBI BLink). & (gnl|cdd|35250 : 113.0) no description available & (gnl|cdd|34727 : 83.8) no description available & (p27164|calm3_pethy : 82.0) Calmodulin-related protein - Petunia hybrida (Petunia) & (reliability: 312.0) & (original description: Putative CML36, Description = Probable calcium-binding protein CML36, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben044scf00023238ctg004_3143-7134' '(q6ret7|ccamk_medtr : 273.0) Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3 (EC 2.7.11.17) (Does not make infections protein 3) (CCaMK DMI3) (MtCCaMK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47550 : 170.0) no description available & (gnl|cdd|35255 : 168.0) no description available & (at5g12180 : 134.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 17 (CPK17); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of pollen tube growth, protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 34 (TAIR:AT5G19360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative DMI3, Description = Calcium/calmodulin dependent protein kinase, PFAM = PF00069)' T '30.3' 'signalling.calcium' 'niben044scf00023313ctg019_1-5409' '(at5g28850 : 654.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G28900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37773 : 509.0) no description available & (reliability: 1308.0) & (original description: Putative P2R3B, Description = Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, PFAM = PF13499)' T '30.3' 'signalling.calcium' 'niben044scf00023313ctg021_1-1063' '(at5g28850 : 107.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G28900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37773 : 88.5) no description available & (reliability: 214.0) & (original description: Putative B''ALPHA, Description = Calcium-binding EF-hand, PFAM = )' T '30.3' 'signalling.calcium' 'niben044scf00025169ctg001_1-3219' '(at5g03960 : 158.0) IQ-domain 12 (IQD12); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 11 (TAIR:AT5G13460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative BnaAnng00890D, Description = BnaAnng00890D protein, PFAM = PF13178;PF00612;PF00612)' T '30.3' 'signalling.calcium' 'niben044scf00026063ctg001_14675-17219' '(at5g57110 : 82.0) Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane.; "autoinhibited Ca2+ -ATPase, isoform 8" (ACA8); FUNCTIONS IN: protein self-association, calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: autoinhibited Ca(2+)-ATPase 10 (TAIR:AT4G29900.1); Has 45517 Blast hits to 34552 proteins in 3221 species: Archae - 872; Bacteria - 31142; Metazoa - 4022; Fungi - 2709; Plants - 2112; Viruses - 3; Other Eukaryotes - 4657 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative pca1, Description = Calcium-transporting ATPase, PFAM = PF00122)' T '30.3' 'signalling.calcium' 'niben044scf00027106ctg013_8594-13888' '(at4g09570 : 796.0) Encodes a member of Calcium Dependent Protein Kinase (CDPK) gene family.Positive regulator of ABA signaling. Phosphorylates ABA responsive transcription factors ABF1 and ABF4.; calcium-dependent protein kinase 4 (CPK4); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 2 (TAIR:AT1G35670.1); Has 132709 Blast hits to 123975 proteins in 4221 species: Archae - 161; Bacteria - 14258; Metazoa - 49454; Fungi - 17991; Plants - 27137; Viruses - 592; Other Eukaryotes - 23116 (source: NCBI BLink). & (p28583|cdpk_soybn : 773.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (gnl|cdd|35255 : 396.0) no description available & (gnl|cdd|29142 : 278.0) no description available & (reliability: 1592.0) & (original description: Putative CPK11, Description = Calcium-dependent protein kinase 11, PFAM = PF00069;PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben044scf00027973ctg005_4855-9292' '(at2g26180 : 335.0) IQ-domain 6 (IQD6); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 8 (TAIR:AT1G72670.1); Has 885 Blast hits to 872 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 22; Fungi - 10; Plants - 828; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 670.0) & (original description: Putative IQD3, Description = Protein IQ-DOMAIN 1, PFAM = PF13178)' T '30.3' 'signalling.calcium' 'niben044scf00028307ctg002_1823-6602' '(at5g03040 : 265.0) IQ-domain 2 (iqd2); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 1 (TAIR:AT3G09710.1). & (reliability: 530.0) & (original description: Putative iqd2, Description = AT5g03040/F15A17_70, PFAM = PF00612;PF13178)' T '30.3' 'signalling.calcium' 'niben044scf00028348ctg000_1-4605' '(at5g04170 : 274.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G10300.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35260 : 211.0) no description available & (reliability: 548.0) & (original description: Putative CML49, Description = Probable calcium-binding protein CML49, PFAM = PF13202;PF13202)' T '30.3' 'signalling.calcium' 'niben044scf00029252ctg011_21767-25796' '(at4g26570 : 270.0) member of AtCBLs (Calcineurin B-like Calcium Sensor Proteins); calcineurin B-like 3 (CBL3); FUNCTIONS IN: calcium ion binding; INVOLVED IN: detection of calcium ion; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like protein 2 (TAIR:AT5G55990.1); Has 7988 Blast hits to 7953 proteins in 833 species: Archae - 0; Bacteria - 10; Metazoa - 3891; Fungi - 1253; Plants - 1902; Viruses - 0; Other Eukaryotes - 932 (source: NCBI BLink). & (gnl|cdd|35257 : 123.0) no description available & (reliability: 540.0) & (original description: Putative cBL9, Description = Calcineurin B-like protein 3, PFAM = )' T '30.3' 'signalling.calcium' 'niben044scf00031837ctg004_24902-27758' '(gnl|cdd|35425 : 134.0) no description available & (at5g57110 : 105.0) Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane.; "autoinhibited Ca2+ -ATPase, isoform 8" (ACA8); FUNCTIONS IN: protein self-association, calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: autoinhibited Ca(2+)-ATPase 10 (TAIR:AT4G29900.1); Has 45517 Blast hits to 34552 proteins in 3221 species: Archae - 872; Bacteria - 31142; Metazoa - 4022; Fungi - 2709; Plants - 2112; Viruses - 3; Other Eukaryotes - 4657 (source: NCBI BLink). & (q6atv4|aca2_orysa : 90.1) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (reliability: 208.0) & (original description: Putative pca1, Description = Calcium-transporting ATPase, PFAM = )' T '30.3' 'signalling.calcium' 'niben044scf00031973ctg000_1936-7329' '(at2g17290 : 911.0) Encodes calcium dependent protein kinase 6 (CPK6), a member of the Arabidopsis CDPK gene family. CDPKs contain an intrinsic Ca2+-activation domain with four EF hand Ca2+-binding sites. CDPKs protein kinases have been proposed to function in multiple plant signal transduction pathways downstream of [Ca2+]cyt elevations, thus transducing various physiological responses. CPK6 is expressed in both guard cells and mesophyll cells. Functions in guard cell ion channel regulation. ABA and Ca(2+) activation of slow-type anion channels and, interestingly, ABA activation of plasma membrane Ca(2+)-permeable channels were impaired in independent alleles of single and double cpk3cpk6 mutant guard cells. Furthermore, ABA- and Ca(2+)-induced stomatal closing were partially impaired in these cpk3cpk6 mutant alleles. CPK3 is also a member of the Arabidopsis CDPK family.; calcium dependent protein kinase 6 (CPK6); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of anion channel activity, protein amino acid phosphorylation, N-terminal protein myristoylation, abscisic acid mediated signaling pathway, regulation of stomatal movement; LOCATED IN: cytosol, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calmodulin-domain protein kinase 5 (TAIR:AT4G35310.1); Has 133264 Blast hits to 125497 proteins in 3863 species: Archae - 149; Bacteria - 13464; Metazoa - 49073; Fungi - 17503; Plants - 30048; Viruses - 473; Other Eukaryotes - 22554 (source: NCBI BLink). & (p53684|cdpk3_orysa : 743.0) Calcium-dependent protein kinase, isoform 11 (EC 2.7.11.1) (CDPK 11) - Oryza sativa (Rice) & (gnl|cdd|35255 : 407.0) no description available & (gnl|cdd|29142 : 273.0) no description available & (reliability: 1822.0) & (original description: Putative CPK5, Description = Calcium-dependent protein kinase 5, PFAM = PF00069;PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben044scf00031973ctg000_2182-6024' '(at2g17290 : 717.0) Encodes calcium dependent protein kinase 6 (CPK6), a member of the Arabidopsis CDPK gene family. CDPKs contain an intrinsic Ca2+-activation domain with four EF hand Ca2+-binding sites. CDPKs protein kinases have been proposed to function in multiple plant signal transduction pathways downstream of [Ca2+]cyt elevations, thus transducing various physiological responses. CPK6 is expressed in both guard cells and mesophyll cells. Functions in guard cell ion channel regulation. ABA and Ca(2+) activation of slow-type anion channels and, interestingly, ABA activation of plasma membrane Ca(2+)-permeable channels were impaired in independent alleles of single and double cpk3cpk6 mutant guard cells. Furthermore, ABA- and Ca(2+)-induced stomatal closing were partially impaired in these cpk3cpk6 mutant alleles. CPK3 is also a member of the Arabidopsis CDPK family.; calcium dependent protein kinase 6 (CPK6); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of anion channel activity, protein amino acid phosphorylation, N-terminal protein myristoylation, abscisic acid mediated signaling pathway, regulation of stomatal movement; LOCATED IN: cytosol, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calmodulin-domain protein kinase 5 (TAIR:AT4G35310.1); Has 133264 Blast hits to 125497 proteins in 3863 species: Archae - 149; Bacteria - 13464; Metazoa - 49073; Fungi - 17503; Plants - 30048; Viruses - 473; Other Eukaryotes - 22554 (source: NCBI BLink). & (p53684|cdpk3_orysa : 592.0) Calcium-dependent protein kinase, isoform 11 (EC 2.7.11.1) (CDPK 11) - Oryza sativa (Rice) & (gnl|cdd|35255 : 407.0) no description available & (gnl|cdd|29142 : 268.0) no description available & (reliability: 1434.0) & (original description: Putative cpk9, Description = Calcium-dependent protein kinase 1, PFAM = PF00036;PF00069)' T '30.3' 'signalling.calcium' 'niben044scf00032057ctg007_1-5228' '(at3g52870 : 174.0) IQ calmodulin-binding motif family protein; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT3G58480.1); Has 341 Blast hits to 277 proteins in 58 species: Archae - 0; Bacteria - 26; Metazoa - 0; Fungi - 100; Plants - 209; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative IQM1, Description = Calmodulin-binding family protein, PFAM = )' T '30.3' 'signalling.calcium' 'niben044scf00032261ctg006_1-7331' '(at3g51850 : 704.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 13 (CPK13); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 30 (TAIR:AT1G74740.1); Has 124889 Blast hits to 118841 proteins in 3848 species: Archae - 180; Bacteria - 14009; Metazoa - 46910; Fungi - 16716; Plants - 24454; Viruses - 407; Other Eukaryotes - 22213 (source: NCBI BLink). & (p28583|cdpk_soybn : 446.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (gnl|cdd|35255 : 375.0) no description available & (gnl|cdd|29142 : 263.0) no description available & (reliability: 1408.0) & (original description: Putative cpk1, Description = Calcium-dependent protein kinase, PFAM = PF00036;PF00069)' T '30.3' 'signalling.calcium' 'niben044scf00034247ctg025_3400-8625' '(at3g13460 : 201.0) Physically interacts with CIPK1.; evolutionarily conserved C-terminal region 2 (ECT2); FUNCTIONS IN: protein binding; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 4 (TAIR:AT1G55500.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37112 : 175.0) no description available & (gnl|cdd|67749 : 133.0) no description available & (reliability: 402.0) & (original description: Putative ECT1, Description = Yth domain-containing protein, putative, PFAM = PF04146)' T '30.3' 'signalling.calcium' 'niben044scf00034797ctg003_978-5758' '(gnl|cdd|35425 : 851.0) no description available & (at3g22910 : 749.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: cation transport, calcium ion transport, metabolic process, ATP biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT3G63380.1); Has 44077 Blast hits to 34142 proteins in 3178 species: Archae - 842; Bacteria - 29879; Metazoa - 3977; Fungi - 2621; Plants - 2012; Viruses - 3; Other Eukaryotes - 4743 (source: NCBI BLink). & (q2qmx9|aca1_orysa : 463.0) Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) - Oryza sativa (Rice) & (gnl|cdd|30822 : 455.0) no description available & (reliability: 1498.0) & (original description: Putative pca1, Description = Calcium-transporting ATPase, PFAM = PF00122;PF00702;PF00690)' T '30.3' 'signalling.calcium' 'niben044scf00035335ctg007_1-4366' '(q40401|calr_nicpl : 590.0) Calreticulin precursor - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09210 : 516.0) Encodes one of three Arabidopsis calreticulins.; calreticulin 1b (CRT1b); FUNCTIONS IN: unfolded protein binding, calcium ion binding; INVOLVED IN: response to oxidative stress, response to salt stress; LOCATED IN: mitochondrion, endoplasmic reticulum, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P (InterPro:IPR009033), Calreticulin/calnexin (InterPro:IPR001580), Calreticulin/calnexin, conserved site (InterPro:IPR018124), Calreticulin (InterPro:IPR009169), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: calreticulin 1a (TAIR:AT1G56340.1); Has 5507 Blast hits to 3456 proteins in 438 species: Archae - 6; Bacteria - 291; Metazoa - 2217; Fungi - 528; Plants - 416; Viruses - 176; Other Eukaryotes - 1873 (source: NCBI BLink). & (gnl|cdd|35893 : 486.0) no description available & (gnl|cdd|84651 : 318.0) no description available & (reliability: 1032.0) & (original description: Putative CAL1, Description = Calreticulin, PFAM = PF00262;PF00262)' T '30.3' 'signalling.calcium' 'niben044scf00037523ctg000_5207-10153' '(at3g15050 : 199.0) IQ-domain 10 (IQD10); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 9 (TAIR:AT2G33990.1); Has 647 Blast hits to 643 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 647; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative iqd9, Description = V-type proton ATPase proteolipid subunit, PFAM = PF00612)' T '30.3' 'signalling.calcium' 'niben044scf00039768ctg003_6401-21187' '(p28583|cdpk_soybn : 798.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (at1g35670 : 772.0) Encodes a Ca(2+)-dependent, calmodulin-independent protein kinase that is rapidly induced by drought and high-salt stress but not by low-temperature stress or heat stress. Positive regulator of ABA signaling. Phosphorylates ABA responsive transcription factors ABF1 and ABF4.; calcium-dependent protein kinase 2 (CDPK2); FUNCTIONS IN: calmodulin-dependent protein kinase activity, kinase activity; INVOLVED IN: response to water deprivation, response to salt stress, protein amino acid phosphorylation, positive regulation of abscisic acid mediated signaling pathway; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 4 (TAIR:AT4G09570.1); Has 134131 Blast hits to 125244 proteins in 4234 species: Archae - 175; Bacteria - 14420; Metazoa - 49980; Fungi - 18055; Plants - 27559; Viruses - 606; Other Eukaryotes - 23336 (source: NCBI BLink). & (gnl|cdd|35255 : 398.0) no description available & (gnl|cdd|29142 : 278.0) no description available & (reliability: 1544.0) & (original description: Putative cpk9, Description = Calcium-dependent protein kinase 1, PFAM = PF13499;PF13499;PF00069)' T '30.3' 'signalling.calcium' 'niben044scf00040193ctg001_1027-7928' '(at1g53590 : 738.0) NTMC2T6.1; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G14590.2); Has 5916 Blast hits to 4916 proteins in 346 species: Archae - 2; Bacteria - 105; Metazoa - 3154; Fungi - 722; Plants - 1160; Viruses - 7; Other Eukaryotes - 766 (source: NCBI BLink). & (gnl|cdd|34643 : 129.0) no description available & (reliability: 1438.0) & (original description: Putative NTMC2T6.1, Description = C2 domain-containing protein At1g53590, PFAM = PF00168)' T '30.3' 'signalling.calcium' 'niben044scf00040669ctg002_53-7078' '(at4g28600 : 634.0) encodes a calmodulin-binding protein that is expressed in pollen, suspension culture cells, flowers, and fruits.; no pollen germination related 2 (NPGR2); FUNCTIONS IN: calmodulin binding; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT2G43040.1); Has 2060 Blast hits to 1763 proteins in 357 species: Archae - 278; Bacteria - 547; Metazoa - 329; Fungi - 78; Plants - 247; Viruses - 0; Other Eukaryotes - 581 (source: NCBI BLink). & (gnl|cdd|39364 : 519.0) no description available & (reliability: 1268.0) & (original description: Putative NPGR2, Description = At4g28600, PFAM = PF13181)' T '30.3' 'signalling.calcium' 'niben044scf00047822ctg002_683-13515' '(at1g21630 : 457.0) Calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EPS15 homology (EH) (InterPro:IPR000261), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT1G20760.1). & (gnl|cdd|36216 : 104.0) no description available & (reliability: 914.0) & (original description: Putative pco108452, Description = Calcium-binding EF hand-like protein, PFAM = PF12763)' T '30.3' 'signalling.calcium' 'niben044scf00048319ctg006_4682-15204' '(at2g46700 : 823.0) CDPK-related kinase 3 (CRK3); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Calcium-dependent protein kinase (CDPK) family protein (TAIR:AT5G24430.1); Has 97610 Blast hits to 96449 proteins in 2853 species: Archae - 105; Bacteria - 12972; Metazoa - 36079; Fungi - 11803; Plants - 17625; Viruses - 411; Other Eukaryotes - 18615 (source: NCBI BLink). & (p53681|crk_dauca : 667.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 354.0) no description available & (gnl|cdd|29142 : 269.0) no description available & (reliability: 1646.0) & (original description: Putative CRK3, Description = CDPK-related kinase 3, PFAM = PF00069)' T '30.3' 'signalling.calcium' 'niben044scf00051747ctg001_1-3192' '(at4g27790 : 298.0) Calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT5G08580.1); Has 4096 Blast hits to 3931 proteins in 669 species: Archae - 0; Bacteria - 5; Metazoa - 1396; Fungi - 738; Plants - 1509; Viruses - 0; Other Eukaryotes - 448 (source: NCBI BLink). & (gnl|cdd|39424 : 182.0) no description available & (reliability: 596.0) & (original description: Putative BnaA01g16670D, Description = BnaA01g16670D protein, PFAM = PF13202)' T '30.3' 'signalling.calcium' 'niben044scf00051979ctg000_2030-8938' '(at1g74740 : 865.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 30 (CPK30); FUNCTIONS IN: calmodulin-dependent protein kinase activity, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation, abscisic acid mediated signaling pathway; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 1 (TAIR:AT1G18890.1); Has 129906 Blast hits to 123880 proteins in 3943 species: Archae - 178; Bacteria - 14335; Metazoa - 48347; Fungi - 17163; Plants - 26785; Viruses - 481; Other Eukaryotes - 22617 (source: NCBI BLink). & (p53683|cdpk2_orysa : 538.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (gnl|cdd|35255 : 394.0) no description available & (gnl|cdd|29142 : 272.0) no description available & (reliability: 1730.0) & (original description: Putative CPK30, Description = Calcium-dependent protein kinase 30, PFAM = PF00069;PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben044scf00054107ctg001_278-4959' '(at3g49260 : 126.0) IQ-domain 21 (iqd21); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 2 (TAIR:AT5G03040.3). & (reliability: 252.0) & (original description: Putative IQD5, Description = IQ calmodulin-binding motif family protein, expressed, PFAM = PF00612;PF00612;PF13178)' T '30.3' 'signalling.calcium' 'niben044scf00056807ctg000_1392-5827' '(at4g21940 : 335.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 15 (CPK15); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 21 (TAIR:AT4G04720.1). & (p53683|cdpk2_orysa : 329.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (gnl|cdd|35250 : 106.0) no description available & (gnl|cdd|34727 : 93.4) no description available & (reliability: 670.0) & (original description: Putative cpk1, Description = Calcium-dependent protein kinase, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben044scf00056807ctg005_1713-6517' '(p28582|cdpk_dauca : 487.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (at4g04720 : 469.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 21 (CPK21); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 15 (TAIR:AT4G21940.1); Has 137194 Blast hits to 129287 proteins in 3977 species: Archae - 168; Bacteria - 14125; Metazoa - 50898; Fungi - 18038; Plants - 29874; Viruses - 499; Other Eukaryotes - 23592 (source: NCBI BLink). & (gnl|cdd|35255 : 362.0) no description available & (gnl|cdd|29142 : 268.0) no description available & (reliability: 938.0) & (original description: Putative cpk1, Description = Calcium-dependent protein kinase, PFAM = PF00069)' T '30.3' 'signalling.calcium' 'niben044scf00059209ctg000_3913-9536' '(at3g57530 : 839.0) Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitro; calcium-dependent protein kinase 32 (CPK32); FUNCTIONS IN: protein binding, calcium-dependent protein kinase C activity, calmodulin-dependent protein kinase activity, kinase activity; INVOLVED IN: response to salt stress, protein amino acid phosphorylation, N-terminal protein myristoylation, abscisic acid mediated signaling pathway; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 14 (TAIR:AT2G41860.1); Has 119294 Blast hits to 116101 proteins in 3724 species: Archae - 161; Bacteria - 14072; Metazoa - 45815; Fungi - 14807; Plants - 21931; Viruses - 443; Other Eukaryotes - 22065 (source: NCBI BLink). & (p28583|cdpk_soybn : 513.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (gnl|cdd|35255 : 396.0) no description available & (gnl|cdd|47550 : 285.0) no description available & (reliability: 1678.0) & (original description: Putative CPK32, Description = Calcium-dependent protein kinase 32, PFAM = PF13499;PF00069;PF13833)' T '30.3' 'signalling.calcium' 'niben101scf00035_121883-138308' '(at1g65540 : 758.0) LETM1-like protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), LETM1-like (InterPro:IPR011685); BEST Arabidopsis thaliana protein match is: LETM1-like protein (TAIR:AT3G59820.1); Has 7253 Blast hits to 6279 proteins in 764 species: Archae - 76; Bacteria - 1084; Metazoa - 3311; Fungi - 589; Plants - 471; Viruses - 24; Other Eukaryotes - 1698 (source: NCBI BLink). & (gnl|cdd|36261 : 373.0) no description available & (gnl|cdd|87368 : 339.0) no description available & (reliability: 1516.0) & (original description: Putative cbp1, Description = Ca2+ binding protein cbp1, PFAM = PF07766)' T '30.3' 'signalling.calcium' 'niben101scf00057_8676-13395' '(at1g76040 : 751.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 29 (CPK29); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 21 (TAIR:AT4G04720.1); Has 142530 Blast hits to 132137 proteins in 3984 species: Archae - 133; Bacteria - 14530; Metazoa - 52901; Fungi - 18639; Plants - 31038; Viruses - 504; Other Eukaryotes - 24785 (source: NCBI BLink). & (p53683|cdpk2_orysa : 706.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (gnl|cdd|35255 : 382.0) no description available & (gnl|cdd|29142 : 269.0) no description available & (reliability: 1502.0) & (original description: Putative CPK29, Description = Calcium-dependent protein kinase 29, PFAM = PF13499;PF13499;PF00069)' T '30.3' 'signalling.calcium' 'niben101scf00069_1600825-1603076' '(q8vwy6|polc1_tobac : 142.0) Polcalcin Nic t 1 (Calcium-binding pollen allergen Nic t 1) - Nicotiana tabacum (Common tobacco) & (at3g03430 : 101.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: pollen calcium-binding protein 1 (TAIR:AT5G17480.1); Has 11605 Blast hits to 7790 proteins in 1100 species: Archae - 2; Bacteria - 49; Metazoa - 4145; Fungi - 2353; Plants - 3498; Viruses - 0; Other Eukaryotes - 1558 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative Nict1, Description = Polcalcin Nic t 1, PFAM = PF13499)' T '30.3' 'signalling.calcium' 'niben101scf00083_1077-25246' '(at4g04720 : 808.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 21 (CPK21); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 15 (TAIR:AT4G21940.1); Has 137194 Blast hits to 129287 proteins in 3977 species: Archae - 168; Bacteria - 14125; Metazoa - 50898; Fungi - 18038; Plants - 29874; Viruses - 499; Other Eukaryotes - 23592 (source: NCBI BLink). & (p53683|cdpk2_orysa : 800.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (gnl|cdd|35255 : 420.0) no description available & (gnl|cdd|29142 : 279.0) no description available & (reliability: 1616.0) & (original description: Putative cpk1, Description = Calcium-dependent protein kinase, PFAM = PF13499;PF13499;PF00069)' T '30.3' 'signalling.calcium' 'niben101scf00109_721051-723473' '(at1g76650 : 134.0) calmodulin-like 38 (CML38); CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G76640.1). & (gnl|cdd|35250 : 98.2) no description available & (reliability: 268.0) & (original description: Putative CML19, Description = Putative calcium-binding protein CML19, PFAM = PF13833;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf00135_79157-86318' '(at4g38810 : 468.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcium-binding EF hand family protein (TAIR:AT5G28830.1); Has 314 Blast hits to 218 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 310; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 936.0) & (original description: Putative ef, Description = EF-hands-containing protein, PFAM = )' T '30.3' 'signalling.calcium' 'niben101scf00149_294737-305724' '(at3g51850 : 934.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 13 (CPK13); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 30 (TAIR:AT1G74740.1); Has 124889 Blast hits to 118841 proteins in 3848 species: Archae - 180; Bacteria - 14009; Metazoa - 46910; Fungi - 16716; Plants - 24454; Viruses - 407; Other Eukaryotes - 22213 (source: NCBI BLink). & (p53683|cdpk2_orysa : 548.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (gnl|cdd|35255 : 379.0) no description available & (gnl|cdd|29142 : 268.0) no description available & (reliability: 1868.0) & (original description: Putative CPK13, Description = Calcium-dependent protein kinase 13, PFAM = PF00069;PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf00230_102820-106527' '(at5g24270 : 304.0) encodes a calcium sensor that is essential for K+ nutrition, K+/Na+ selectivity, and salt tolerance. The protein is similar to calcineurin B. Lines carrying recessive mutations are hypersensitive to Na+ and Li+ stresses and is unable to grow in low K+. The growth defect is rescued by extracellular calcium.; SALT OVERLY SENSITIVE 3 (SOS3); CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like protein 8 (TAIR:AT1G64480.1). & (gnl|cdd|35257 : 171.0) no description available & (reliability: 608.0) & (original description: Putative cbl, Description = Calcineurin B-like molecule, PFAM = PF13499)' T '30.3' 'signalling.calcium' 'niben101scf00259_272385-278230' '(at3g57330 : 1321.0) autoinhibited Ca2+-ATPase 11 (ACA11); FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: defense response to bacterium, negative regulation of programmed cell death, anion homeostasis; LOCATED IN: plant-type vacuole membrane, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: autoinhibited Ca(2+)-ATPase, isoform 4 (TAIR:AT2G41560.1); Has 45492 Blast hits to 34566 proteins in 3220 species: Archae - 840; Bacteria - 31068; Metazoa - 4067; Fungi - 2704; Plants - 2054; Viruses - 3; Other Eukaryotes - 4756 (source: NCBI BLink). & (gnl|cdd|35425 : 1266.0) no description available & (q2ras0|aca5_orysa : 1244.0) Probable calcium-transporting ATPase 5, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 5) - Oryza sativa (Rice) & (gnl|cdd|30822 : 590.0) no description available & (reliability: 2642.0) & (original description: Putative pca1, Description = Calcium-transporting ATPase, PFAM = PF00122;PF00689;PF00690;PF00702)' T '30.3' 'signalling.calcium' 'niben101scf00290_63381-75563' '(at5g56360 : 456.0) Encodes PSL4, beat-subunit of endoplasmic reticulum-resident glucosidase II, which is essential for stable accumulation and quality control of the elf18 receptor EFR but not the flg22 receptor FLS2.; PRIORITY IN SWEET LIFE 4 (PSL4); FUNCTIONS IN: calmodulin binding; INVOLVED IN: defense response to bacterium; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate receptor, binding (InterPro:IPR009011); BEST Arabidopsis thaliana protein match is: protein kinase C substrate, heavy chain-related (TAIR:AT2G42390.1); Has 58797 Blast hits to 35699 proteins in 2008 species: Archae - 449; Bacteria - 9679; Metazoa - 21420; Fungi - 7377; Plants - 2361; Viruses - 398; Other Eukaryotes - 17113 (source: NCBI BLink). & (gnl|cdd|37608 : 316.0) no description available & (reliability: 912.0) & (original description: Putative PSL4, Description = Glucosidase 2 subunit beta, PFAM = PF12999;PF13015)' T '30.3' 'signalling.calcium' 'niben101scf00309_265568-271227' '(at4g14750 : 195.0) IQ-domain 19 (IQD19); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 26 (TAIR:AT3G16490.1); Has 2338 Blast hits to 1945 proteins in 201 species: Archae - 4; Bacteria - 168; Metazoa - 612; Fungi - 134; Plants - 1079; Viruses - 66; Other Eukaryotes - 275 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative iqd2, Description = Calmodulin-binding family protein, PFAM = PF00612;PF00612;PF13178)' T '30.3' 'signalling.calcium' 'niben101scf00339_809418-817500' '(at1g74690 : 182.0) IQ-domain 31 (IQD31); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 30 (TAIR:AT1G18840.2); Has 8498 Blast hits to 6418 proteins in 674 species: Archae - 21; Bacteria - 823; Metazoa - 3400; Fungi - 838; Plants - 1044; Viruses - 44; Other Eukaryotes - 2328 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative IQD5, Description = IQ-domain 21, putative isoform 1, PFAM = PF13178;PF00612;PF00612)' T '30.3' 'signalling.calcium' 'niben101scf00362_36290-42554' '(gnl|cdd|71278 : 144.0) no description available & (at5g04020 : 106.0) calmodulin binding; FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Calmodulin-binding protein, plant (InterPro:IPR012417); BEST Arabidopsis thaliana protein match is: Plant calmodulin-binding protein-related (TAIR:AT2G38800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative Zm.64915, Description = Calcium/calmodulin protein kinase, PFAM = PF07839;PF07839)' T '30.3' 'signalling.calcium' 'niben101scf00372_282434-285405' '(at2g15760 : 152.0) Protein of unknown function (DUF1645); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT2G26530.2); Has 171 Blast hits to 167 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|71256 : 80.5) no description available & (reliability: 304.0) & (original description: Putative At2g15760, Description = At2g15760, PFAM = PF07816)' T '30.3' 'signalling.calcium' 'niben101scf00381_906948-927009' '(at1g21630 : 712.0) Calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EPS15 homology (EH) (InterPro:IPR000261), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT1G20760.1). & (gnl|cdd|36216 : 137.0) no description available & (gnl|cdd|47376 : 93.4) no description available & (reliability: 1424.0) & (original description: Putative BnaA07g10930D, Description = BnaA07g10930D protein, PFAM = PF13202;PF12763)' T '30.3' 'signalling.calcium' 'niben101scf00414_601001-612264' '(at5g55990 : 369.0) Encodes a member of the Arabidopsis CBL (Calcineurin B-like Calcium Sensor) protein family.; calcineurin B-like protein 2 (CBL2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: calcium-mediated signaling; LOCATED IN: cytosolic ribosome, plant-type vacuole membrane, vacuole, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like 3 (TAIR:AT4G26570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35257 : 169.0) no description available & (reliability: 738.0) & (original description: Putative CBL3, Description = Calcineurin B-like protein 3, PFAM = PF13833;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf00428_956715-961139' '(at1g73805 : 387.0) Calmodulin binding protein-like; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT5G57580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71325 : 346.0) no description available & (reliability: 774.0) & (original description: Putative SARD1, Description = Protein SAR DEFICIENT 1, PFAM = PF07887)' T '30.3' 'signalling.calcium' 'niben101scf00435_215220-221646' '(p49101|cdpk2_maize : 790.0) Calcium-dependent protein kinase 2 (EC 2.7.11.1) (CDPK 2) - Zea mays (Maize) & (at3g20410 : 785.0) calmodulin-domain protein kinase CDPK isoform 9 (CPK9); calmodulin-domain protein kinase 9 (CPK9); FUNCTIONS IN: calmodulin-dependent protein kinase activity, kinase activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 33 (TAIR:AT1G50700.1); Has 135370 Blast hits to 127423 proteins in 3989 species: Archae - 163; Bacteria - 13987; Metazoa - 51029; Fungi - 18072; Plants - 28065; Viruses - 501; Other Eukaryotes - 23553 (source: NCBI BLink). & (gnl|cdd|35255 : 402.0) no description available & (gnl|cdd|29142 : 278.0) no description available & (reliability: 1570.0) & (original description: Putative CPK9, Description = Calcium-dependent protein kinase 9, PFAM = PF13499;PF13499;PF00069)' T '30.3' 'signalling.calcium' 'niben101scf00453_324428-329198' '(at5g03960 : 140.0) IQ-domain 12 (IQD12); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 11 (TAIR:AT5G13460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative BnaAnng00890D, Description = BnaAnng00890D protein, PFAM = PF13178;PF00612;PF00612)' T '30.3' 'signalling.calcium' 'niben101scf00466_538736-544545' '(q40401|calr_nicpl : 645.0) Calreticulin precursor - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g09210 : 559.0) Encodes one of three Arabidopsis calreticulins.; calreticulin 1b (CRT1b); FUNCTIONS IN: unfolded protein binding, calcium ion binding; INVOLVED IN: response to oxidative stress, response to salt stress; LOCATED IN: mitochondrion, endoplasmic reticulum, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P (InterPro:IPR009033), Calreticulin/calnexin (InterPro:IPR001580), Calreticulin/calnexin, conserved site (InterPro:IPR018124), Calreticulin (InterPro:IPR009169), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: calreticulin 1a (TAIR:AT1G56340.1); Has 5507 Blast hits to 3456 proteins in 438 species: Archae - 6; Bacteria - 291; Metazoa - 2217; Fungi - 528; Plants - 416; Viruses - 176; Other Eukaryotes - 1873 (source: NCBI BLink). & (gnl|cdd|35893 : 493.0) no description available & (gnl|cdd|84651 : 334.0) no description available & (reliability: 1118.0) & (original description: Putative CAL1, Description = Calreticulin, PFAM = PF00262;PF00262)' T '30.3' 'signalling.calcium' 'niben101scf00487_501197-514886' '(at5g56360 : 429.0) Encodes PSL4, beat-subunit of endoplasmic reticulum-resident glucosidase II, which is essential for stable accumulation and quality control of the elf18 receptor EFR but not the flg22 receptor FLS2.; PRIORITY IN SWEET LIFE 4 (PSL4); FUNCTIONS IN: calmodulin binding; INVOLVED IN: defense response to bacterium; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate receptor, binding (InterPro:IPR009011); BEST Arabidopsis thaliana protein match is: protein kinase C substrate, heavy chain-related (TAIR:AT2G42390.1); Has 58797 Blast hits to 35699 proteins in 2008 species: Archae - 449; Bacteria - 9679; Metazoa - 21420; Fungi - 7377; Plants - 2361; Viruses - 398; Other Eukaryotes - 17113 (source: NCBI BLink). & (gnl|cdd|37608 : 303.0) no description available & (reliability: 858.0) & (original description: Putative PSL4, Description = Glucosidase 2 subunit beta, PFAM = PF13015;PF12999)' T '30.3' 'signalling.calcium' 'niben101scf00492_458317-463540' '(at3g10300 : 289.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G04170.1). & (gnl|cdd|35260 : 214.0) no description available & (reliability: 578.0) & (original description: Putative CML49, Description = Probable calcium-binding protein CML49, PFAM = PF13405;PF13202)' T '30.3' 'signalling.calcium' 'niben101scf00539_572976-580532' '(at1g76040 : 728.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 29 (CPK29); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 21 (TAIR:AT4G04720.1); Has 142530 Blast hits to 132137 proteins in 3984 species: Archae - 133; Bacteria - 14530; Metazoa - 52901; Fungi - 18639; Plants - 31038; Viruses - 504; Other Eukaryotes - 24785 (source: NCBI BLink). & (p53683|cdpk2_orysa : 697.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (gnl|cdd|35255 : 383.0) no description available & (gnl|cdd|29142 : 274.0) no description available & (reliability: 1456.0) & (original description: Putative cdpk4, Description = Calcium-dependent protein kinase, PFAM = PF00069;PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf00553_169929-175184' '(at4g00820 : 318.0) IQ-domain 17 (iqd17); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 18 (TAIR:AT1G01110.2); Has 1332 Blast hits to 1131 proteins in 120 species: Archae - 0; Bacteria - 14; Metazoa - 172; Fungi - 58; Plants - 857; Viruses - 43; Other Eukaryotes - 188 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative IQD5, Description = Calmodulin binding protein IQD22, PFAM = PF13178;PF00612;PF00612)' T '30.3' 'signalling.calcium' 'niben101scf00578_573495-575845' '(at4g27280 : 118.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to karrikin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: pinoid-binding protein 1 (TAIR:AT5G54490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative PBP1, Description = Calcium-binding protein PBP1, PFAM = PF13833)' T '30.3' 'signalling.calcium' 'niben101scf00579_139282-141539' '(q8vwy7|polc2_tobac : 145.0) Polcalcin Nic t 2 (Calcium-binding pollen allergen Nic t 2) - Nicotiana tabacum (Common tobacco) & (at3g03430 : 99.8) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: pollen calcium-binding protein 1 (TAIR:AT5G17480.1); Has 11605 Blast hits to 7790 proteins in 1100 species: Archae - 2; Bacteria - 49; Metazoa - 4145; Fungi - 2353; Plants - 3498; Viruses - 0; Other Eukaryotes - 1558 (source: NCBI BLink). & (reliability: 199.6) & (original description: Putative Nict2, Description = Polcalcin Nic t 2, PFAM = PF13499)' T '30.3' 'signalling.calcium' 'niben101scf00595_419641-429628' '(at3g49050 : 626.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity, calmodulin binding; INVOLVED IN: lipid catabolic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), Mono-/di-acylglycerol lipase, N-terminal (InterPro:IPR005592); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G00500.2); Has 551 Blast hits to 551 proteins in 136 species: Archae - 0; Bacteria - 6; Metazoa - 153; Fungi - 88; Plants - 205; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (gnl|cdd|37299 : 374.0) no description available & (gnl|cdd|73213 : 103.0) no description available & (reliability: 1252.0) & (original description: Putative CaMBP, Description = Calmodulin-binding protein, PFAM = PF03893;PF01764)' T '30.3' 'signalling.calcium' 'niben101scf00596_75320-92087' '(at5g12180 : 852.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 17 (CPK17); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of pollen tube growth, protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 34 (TAIR:AT5G19360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p53683|cdpk2_orysa : 671.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (gnl|cdd|35255 : 402.0) no description available & (gnl|cdd|29142 : 278.0) no description available & (reliability: 1704.0) & (original description: Putative CPK34, Description = Calcium-dependent protein kinase 34, PFAM = PF00069;PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf00611_1203093-1207870' '(at4g33050 : 542.0) embryo sac development arrest 39 (EDA39); FUNCTIONS IN: calmodulin binding; INVOLVED IN: polar nucleus fusion, response to chitin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT2G26190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1084.0) & (original description: Putative IQM5, Description = IQ domain-containing protein IQM5, PFAM = )' T '30.3' 'signalling.calcium' 'niben101scf00711_279008-281664' '(at3g10190 : 122.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT2G41410.1); Has 18786 Blast hits to 12756 proteins in 1414 species: Archae - 1; Bacteria - 149; Metazoa - 7817; Fungi - 3299; Plants - 4581; Viruses - 0; Other Eukaryotes - 2939 (source: NCBI BLink). & (gnl|cdd|35250 : 115.0) no description available & (gnl|cdd|34727 : 83.4) no description available & (reliability: 244.0) & (original description: Putative CML36, Description = Probable calcium-binding protein CML36, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf00712_1069896-1081814' '(at1g20760 : 617.0) Calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EPS15 homology (EH) (InterPro:IPR000261), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT1G21630.1); Has 12017 Blast hits to 4944 proteins in 443 species: Archae - 20; Bacteria - 3590; Metazoa - 3650; Fungi - 1736; Plants - 412; Viruses - 16; Other Eukaryotes - 2593 (source: NCBI BLink). & (gnl|cdd|36216 : 154.0) no description available & (gnl|cdd|28934 : 86.8) no description available & (reliability: 1234.0) & (original description: Putative BnaC07g15190D, Description = BnaC07g15190D protein, PFAM = PF13202;PF12763)' T '30.3' 'signalling.calcium' 'niben101scf00730_184981-189394' '(at5g03040 : 253.0) IQ-domain 2 (iqd2); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 1 (TAIR:AT3G09710.1). & (reliability: 506.0) & (original description: Putative iqd2, Description = AT5g03040/F15A17_70, PFAM = PF00612;PF13178)' T '30.3' 'signalling.calcium' 'niben101scf00741_256441-264002' '(at4g23060 : 127.0) IQ-domain 22 (IQD22); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 26 (TAIR:AT3G16490.1); Has 890 Blast hits to 763 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 3; Plants - 728; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative IQD5, Description = Calmodulin binding protein IQD22, PFAM = PF00612;PF00612;PF13178)' T '30.3' 'signalling.calcium' 'niben101scf00765_285197-289725' '(at1g64850 : 228.0) Calcium-binding EF hand family protein; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37445.1); Has 71 Blast hits to 71 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative Sb06g027480, Description = Putative uncharacterized protein Sb06g027480, PFAM = )' T '30.3' 'signalling.calcium' 'niben101scf00790_57999-68876' '(at1g53590 : 649.0) NTMC2T6.1; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G14590.2); Has 5916 Blast hits to 4916 proteins in 346 species: Archae - 2; Bacteria - 105; Metazoa - 3154; Fungi - 722; Plants - 1160; Viruses - 7; Other Eukaryotes - 766 (source: NCBI BLink). & (gnl|cdd|34643 : 98.9) no description available & (reliability: 1272.0) & (original description: Putative PGSC0003DMG400007079, Description = C2 domain-containing protein-like, PFAM = PF00168)' T '30.3' 'signalling.calcium' 'niben101scf00797_1708061-1714249' '(at2g27030 : 248.0) encodes a calmodulin that has higher affinity to kinesin-like calmodulin binding motor protein than CAM4 or CAM6.; calmodulin 5 (CAM5); FUNCTIONS IN: calcium ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 3 (TAIR:AT3G56800.1); Has 36011 Blast hits to 23475 proteins in 1766 species: Archae - 4; Bacteria - 234; Metazoa - 15635; Fungi - 7487; Plants - 7311; Viruses - 0; Other Eukaryotes - 5340 (source: NCBI BLink). & (p27164|calm3_pethy : 246.0) Calmodulin-related protein - Petunia hybrida (Petunia) & (gnl|cdd|34727 : 157.0) no description available & (gnl|cdd|35250 : 156.0) no description available & (reliability: 496.0) & (original description: Putative CAM7, Description = Calmodulin-7, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf00800_269989-275196' '(at5g12480 : 836.0) calmodulin-domain protein kinase CDPK isoform 7 (CPK7); calmodulin-domain protein kinase 7 (CPK7); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 19 (TAIR:AT5G19450.2); Has 104543 Blast hits to 101042 proteins in 3590 species: Archae - 138; Bacteria - 12396; Metazoa - 40131; Fungi - 14132; Plants - 17107; Viruses - 370; Other Eukaryotes - 20269 (source: NCBI BLink). & (p28583|cdpk_soybn : 514.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (gnl|cdd|35255 : 392.0) no description available & (gnl|cdd|29142 : 283.0) no description available & (reliability: 1672.0) & (original description: Putative CPK7, Description = Calcium-dependent protein kinase 7, PFAM = PF13833;PF00069;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf00809_38744-45755' '(at4g28600 : 643.0) encodes a calmodulin-binding protein that is expressed in pollen, suspension culture cells, flowers, and fruits.; no pollen germination related 2 (NPGR2); FUNCTIONS IN: calmodulin binding; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT2G43040.1); Has 2060 Blast hits to 1763 proteins in 357 species: Archae - 278; Bacteria - 547; Metazoa - 329; Fungi - 78; Plants - 247; Viruses - 0; Other Eukaryotes - 581 (source: NCBI BLink). & (gnl|cdd|39364 : 514.0) no description available & (reliability: 1286.0) & (original description: Putative NPG, Description = At2g43040, PFAM = PF13181)' T '30.3' 'signalling.calcium' 'niben101scf00991_592852-599389' '(at4g37640 : 1662.0) Encodes a calmodulin-regulated Ca(2+)-pump located in the endoplasmic reticulum. Belongs to plant 2B ATPase's with an N-terminal autoinhibitor.; calcium ATPase 2 (ACA2); FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding, calcium ion transmembrane transporter activity; INVOLVED IN: transport; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: Cation transporter/ E1-E2 ATPase family protein (TAIR:AT2G22950.1); Has 47430 Blast hits to 34684 proteins in 3201 species: Archae - 904; Bacteria - 32793; Metazoa - 4036; Fungi - 2849; Plants - 2078; Viruses - 3; Other Eukaryotes - 4767 (source: NCBI BLink). & (q2qmx9|aca1_orysa : 1583.0) Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) - Oryza sativa (Rice) & (gnl|cdd|35425 : 1412.0) no description available & (gnl|cdd|30822 : 574.0) no description available & (reliability: 3324.0) & (original description: Putative ACA2, Description = Calcium-transporting ATPase 2, plasma membrane-type, PFAM = PF00690;PF00122;PF00689;PF12515;PF13246)' T '30.3' 'signalling.calcium' 'niben101scf01002_195572-211183' '(at1g53210 : 639.0) sodium/calcium exchanger family protein / calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: transmembrane transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, membrane, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Sodium/calcium exchanger membrane region (InterPro:IPR004837), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G29020.1); Has 622 Blast hits to 603 proteins in 166 species: Archae - 12; Bacteria - 69; Metazoa - 8; Fungi - 194; Plants - 285; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 1278.0) & (original description: Putative BnaA05g14600D, Description = BnaA05g14600D protein, PFAM = PF01699;PF01699;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf01027_250035-258286' '(at4g23650 : 757.0) Encodes calcium dependent protein kinase 3 (CPK3), a member of the Arabidopsis CDPK gene family. CDPKs contain an intrinsic Ca2+-activation domain with four EF hand Ca2+-binding sites. CDPKs protein kinases have been proposed to function in multiple plant signal transduction pathways downstream of [Ca2+]cyt elevations, thus transducing various physiological responses. CPK3 is expressed in both guard cells and mesophyll cells. Functions in guard cell ion channel regulation. ABA and Ca(2+) activation of slow-type anion channels and, interestingly, ABA activation of plasma membrane Ca(2+)-permeable channels were impaired in independent alleles of single and double cpk3cpk6 mutant guard cells. Furthermore, ABA- and Ca(2+)-induced stomatal closing were partially impaired in these cpk3cpk6 mutant alleles. CPK6 is also a member of the Arabidopsis CDPK family.; calcium-dependent protein kinase 6 (CDPK6); FUNCTIONS IN: calmodulin-dependent protein kinase activity, protein kinase activity, kinase activity; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 17 (TAIR:AT5G12180.1); Has 137650 Blast hits to 128872 proteins in 4025 species: Archae - 155; Bacteria - 13983; Metazoa - 52031; Fungi - 17582; Plants - 29890; Viruses - 500; Other Eukaryotes - 23509 (source: NCBI BLink). & (p53683|cdpk2_orysa : 656.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (gnl|cdd|35255 : 397.0) no description available & (gnl|cdd|29142 : 277.0) no description available & (reliability: 1514.0) & (original description: Putative CPK3, Description = Calcium-dependent protein kinase 3, PFAM = PF00069;PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf01063_387822-389838' '(at3g03000 : 208.0) Calmodulin like protein localized in the plant vacuolar compartment with a function of binding and modifying the activity of a tonoplast transporter (AtNHX1) from within the vacuole in a Ca+2- and pH-dependent manner; EF hand calcium-binding protein family; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G32250.1); Has 24706 Blast hits to 18078 proteins in 1578 species: Archae - 2; Bacteria - 105; Metazoa - 9402; Fungi - 6368; Plants - 5242; Viruses - 0; Other Eukaryotes - 3587 (source: NCBI BLink). & (gnl|cdd|35250 : 137.0) no description available & (gnl|cdd|34727 : 109.0) no description available & (p04353|calm_spiol : 108.0) Calmodulin (CaM) - Spinacia oleracea (Spinach) & (reliability: 416.0) & (original description: Putative CML17, Description = Probable calcium-binding protein CML17, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf01112_222326-230500' '(at1g14380 : 221.0) IQ-domain 28 (IQD28); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 29 (TAIR:AT2G02790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative IQD28, Description = At1g14380, PFAM = PF13178;PF00612;PF00612;PF00612)' T '30.3' 'signalling.calcium' 'niben101scf01119_12450-21368' '(at1g53210 : 634.0) sodium/calcium exchanger family protein / calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: transmembrane transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, membrane, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Sodium/calcium exchanger membrane region (InterPro:IPR004837), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G29020.1); Has 622 Blast hits to 603 proteins in 166 species: Archae - 12; Bacteria - 69; Metazoa - 8; Fungi - 194; Plants - 285; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 1268.0) & (original description: Putative DcNCX1, Description = Sodium/calcium exchanger protein, PFAM = PF01699;PF01699;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf01176_17303-20962' '(at2g17290 : 701.0) Encodes calcium dependent protein kinase 6 (CPK6), a member of the Arabidopsis CDPK gene family. CDPKs contain an intrinsic Ca2+-activation domain with four EF hand Ca2+-binding sites. CDPKs protein kinases have been proposed to function in multiple plant signal transduction pathways downstream of [Ca2+]cyt elevations, thus transducing various physiological responses. CPK6 is expressed in both guard cells and mesophyll cells. Functions in guard cell ion channel regulation. ABA and Ca(2+) activation of slow-type anion channels and, interestingly, ABA activation of plasma membrane Ca(2+)-permeable channels were impaired in independent alleles of single and double cpk3cpk6 mutant guard cells. Furthermore, ABA- and Ca(2+)-induced stomatal closing were partially impaired in these cpk3cpk6 mutant alleles. CPK3 is also a member of the Arabidopsis CDPK family.; calcium dependent protein kinase 6 (CPK6); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of anion channel activity, protein amino acid phosphorylation, N-terminal protein myristoylation, abscisic acid mediated signaling pathway, regulation of stomatal movement; LOCATED IN: cytosol, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calmodulin-domain protein kinase 5 (TAIR:AT4G35310.1); Has 133264 Blast hits to 125497 proteins in 3863 species: Archae - 149; Bacteria - 13464; Metazoa - 49073; Fungi - 17503; Plants - 30048; Viruses - 473; Other Eukaryotes - 22554 (source: NCBI BLink). & (p53684|cdpk3_orysa : 580.0) Calcium-dependent protein kinase, isoform 11 (EC 2.7.11.1) (CDPK 11) - Oryza sativa (Rice) & (gnl|cdd|35255 : 405.0) no description available & (gnl|cdd|29142 : 267.0) no description available & (reliability: 1402.0) & (original description: Putative cpk9, Description = Calcium-dependent protein kinase 1, PFAM = PF00069;PF00036)' T '30.3' 'signalling.calcium' 'niben101scf01191_681298-686732' '(at2g17290 : 877.0) Encodes calcium dependent protein kinase 6 (CPK6), a member of the Arabidopsis CDPK gene family. CDPKs contain an intrinsic Ca2+-activation domain with four EF hand Ca2+-binding sites. CDPKs protein kinases have been proposed to function in multiple plant signal transduction pathways downstream of [Ca2+]cyt elevations, thus transducing various physiological responses. CPK6 is expressed in both guard cells and mesophyll cells. Functions in guard cell ion channel regulation. ABA and Ca(2+) activation of slow-type anion channels and, interestingly, ABA activation of plasma membrane Ca(2+)-permeable channels were impaired in independent alleles of single and double cpk3cpk6 mutant guard cells. Furthermore, ABA- and Ca(2+)-induced stomatal closing were partially impaired in these cpk3cpk6 mutant alleles. CPK3 is also a member of the Arabidopsis CDPK family.; calcium dependent protein kinase 6 (CPK6); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of anion channel activity, protein amino acid phosphorylation, N-terminal protein myristoylation, abscisic acid mediated signaling pathway, regulation of stomatal movement; LOCATED IN: cytosol, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calmodulin-domain protein kinase 5 (TAIR:AT4G35310.1); Has 133264 Blast hits to 125497 proteins in 3863 species: Archae - 149; Bacteria - 13464; Metazoa - 49073; Fungi - 17503; Plants - 30048; Viruses - 473; Other Eukaryotes - 22554 (source: NCBI BLink). & (p53684|cdpk3_orysa : 735.0) Calcium-dependent protein kinase, isoform 11 (EC 2.7.11.1) (CDPK 11) - Oryza sativa (Rice) & (gnl|cdd|35255 : 408.0) no description available & (gnl|cdd|29142 : 272.0) no description available & (reliability: 1754.0) & (original description: Putative CPK5, Description = Calcium-dependent protein kinase 5, PFAM = PF13499;PF13499;PF00069)' T '30.3' 'signalling.calcium' 'niben101scf01196_163358-165909' '(at1g24620 : 174.0) EF hand calcium-binding protein family; FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to cold; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G18210.2); Has 28159 Blast hits to 18576 proteins in 1591 species: Archae - 2; Bacteria - 225; Metazoa - 10723; Fungi - 6999; Plants - 5954; Viruses - 2; Other Eukaryotes - 4254 (source: NCBI BLink). & (gnl|cdd|35250 : 124.0) no description available & (p27164|calm3_pethy : 115.0) Calmodulin-related protein - Petunia hybrida (Petunia) & (gnl|cdd|34727 : 96.5) no description available & (reliability: 348.0) & (original description: Putative CML10, Description = Probable calcium-binding protein CML10, PFAM = PF13833;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf01212_55203-64427' '(at3g15050 : 160.0) IQ-domain 10 (IQD10); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 9 (TAIR:AT2G33990.1); Has 647 Blast hits to 643 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 647; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative iqd9, Description = IQ-domain 9 protein, PFAM = PF00612)' T '30.3' 'signalling.calcium' 'niben101scf01212_108206-114413' '(at1g53210 : 224.0) sodium/calcium exchanger family protein / calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: transmembrane transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, membrane, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Sodium/calcium exchanger membrane region (InterPro:IPR004837), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G29020.1); Has 622 Blast hits to 603 proteins in 166 species: Archae - 12; Bacteria - 69; Metazoa - 8; Fungi - 194; Plants - 285; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative PGSC0003DMG400012820, Description = Os01g0212400 protein, PFAM = PF01699;PF01699;PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf01236_20849-32458' '(at3g17470 : 673.0) Ca2+-activated RelA/spot homolog (CRSH); FUNCTIONS IN: GTP diphosphokinase activity, calcium ion binding; INVOLVED IN: guanosine tetraphosphate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 3 (TAIR:AT1G54130.1); Has 14021 Blast hits to 13962 proteins in 3173 species: Archae - 6; Bacteria - 8120; Metazoa - 1259; Fungi - 992; Plants - 727; Viruses - 0; Other Eukaryotes - 2917 (source: NCBI BLink). & (gnl|cdd|36372 : 456.0) no description available & (gnl|cdd|30665 : 203.0) no description available & (reliability: 1346.0) & (original description: Putative CRSH, Description = Probable GTP diphosphokinase CRSH, chloroplastic, PFAM = PF13499;PF04607;PF13328)' T '30.3' 'signalling.calcium' 'niben101scf01269_783475-791359' '(p53683|cdpk2_orysa : 799.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (at3g20410 : 789.0) calmodulin-domain protein kinase CDPK isoform 9 (CPK9); calmodulin-domain protein kinase 9 (CPK9); FUNCTIONS IN: calmodulin-dependent protein kinase activity, kinase activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 33 (TAIR:AT1G50700.1); Has 135370 Blast hits to 127423 proteins in 3989 species: Archae - 163; Bacteria - 13987; Metazoa - 51029; Fungi - 18072; Plants - 28065; Viruses - 501; Other Eukaryotes - 23553 (source: NCBI BLink). & (gnl|cdd|35255 : 407.0) no description available & (gnl|cdd|29142 : 282.0) no description available & (reliability: 1578.0) & (original description: Putative CPK2, Description = Calcium-dependent protein kinase isoform 2, PFAM = PF13499;PF13499;PF00069)' T '30.3' 'signalling.calcium' 'niben101scf01323_453646-456197' '(at5g40190 : 217.0) Identified in a screen for calmodulin-binding proteins obtained from an auxin treated cDNA library.; RNA ligase/cyclic nucleotide phosphodiesterase family protein; FUNCTIONS IN: calmodulin binding; INVOLVED IN: RNA metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA ligase/cyclic nucleotide phosphodiesterase (InterPro:IPR009097); BEST Arabidopsis thaliana protein match is: RNA ligase/cyclic nucleotide phosphodiesterase family protein (TAIR:AT3G28140.1); Has 227 Blast hits to 227 proteins in 109 species: Archae - 0; Bacteria - 185; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 434.0) & (original description: Putative At3g28140, Description = Putative uncharacterized protein At3g28140/MMG15_15, PFAM = PF13563)' T '30.3' 'signalling.calcium' 'niben101scf01326_866667-873634' '(at1g74690 : 211.0) IQ-domain 31 (IQD31); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 30 (TAIR:AT1G18840.2); Has 8498 Blast hits to 6418 proteins in 674 species: Archae - 21; Bacteria - 823; Metazoa - 3400; Fungi - 838; Plants - 1044; Viruses - 44; Other Eukaryotes - 2328 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative IQD5, Description = F3H7.10 protein, PFAM = PF13178;PF00612;PF00612)' T '30.3' 'signalling.calcium' 'niben101scf01339_73366-79221' '(at2g31500 : 725.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 24 (CPK24); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 19 (TAIR:AT5G19450.2); Has 123765 Blast hits to 119993 proteins in 3778 species: Archae - 168; Bacteria - 14541; Metazoa - 46326; Fungi - 15514; Plants - 24284; Viruses - 457; Other Eukaryotes - 22475 (source: NCBI BLink). & (p49101|cdpk2_maize : 492.0) Calcium-dependent protein kinase 2 (EC 2.7.11.1) (CDPK 2) - Zea mays (Maize) & (gnl|cdd|35255 : 381.0) no description available & (gnl|cdd|29142 : 282.0) no description available & (reliability: 1450.0) & (original description: Putative CPK24, Description = Calcium-dependent protein kinase 24, PFAM = PF00069;PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf01350_773370-775918' '(at2g15680 : 173.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family (TAIR:AT5G37770.1); Has 22221 Blast hits to 15732 proteins in 1476 species: Archae - 2; Bacteria - 203; Metazoa - 8340; Fungi - 5009; Plants - 5639; Viruses - 0; Other Eukaryotes - 3028 (source: NCBI BLink). & (gnl|cdd|35250 : 108.0) no description available & (gnl|cdd|34727 : 86.4) no description available & (p04352|calm_chlre : 80.1) Calmodulin (CaM) - Chlamydomonas reinhardtii & (reliability: 346.0) & (original description: Putative CML1, Description = Calmodulin-like protein 1, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf01382_539998-547724' '(at3g18430 : 218.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: calmodulin 9 (TAIR:AT3G51920.1). & (gnl|cdd|35257 : 113.0) no description available & (reliability: 436.0) & (original description: Putative CNB, Description = Protein phosphatase 3, regulatory subunit, PFAM = PF13499)' T '30.3' 'signalling.calcium' 'niben101scf01442_91068-100549' '(at3g52870 : 492.0) IQ calmodulin-binding motif family protein; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT3G58480.1); Has 341 Blast hits to 277 proteins in 58 species: Archae - 0; Bacteria - 26; Metazoa - 0; Fungi - 100; Plants - 209; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 984.0) & (original description: Putative IQM3, Description = IQ domain-containing protein IQM3, PFAM = )' T '30.3' 'signalling.calcium' 'niben101scf01442_91236-99350' '(at3g52870 : 385.0) IQ calmodulin-binding motif family protein; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT3G58480.1); Has 341 Blast hits to 277 proteins in 58 species: Archae - 0; Bacteria - 26; Metazoa - 0; Fungi - 100; Plants - 209; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 770.0) & (original description: Putative IQM1, Description = Calmodulin-binding family protein, PFAM = )' T '30.3' 'signalling.calcium' 'niben101scf01463_761771-767947' '(at5g62570 : 274.0) Calmodulin binding protein-like; FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT4G25800.2). & (gnl|cdd|71325 : 257.0) no description available & (reliability: 548.0) & (original description: Putative CBP60A, Description = BnaA06g22060D protein, PFAM = PF07887)' T '30.3' 'signalling.calcium' 'niben101scf01463_769071-778432' '(gnl|cdd|71325 : 203.0) no description available & (at5g62570 : 172.0) Calmodulin binding protein-like; FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT4G25800.2). & (reliability: 344.0) & (original description: Putative PGSC0003DMG401024480, Description = , PFAM = PF07887)' T '30.3' 'signalling.calcium' 'niben101scf01463_841707-848993' '(gnl|cdd|71325 : 200.0) no description available & (at5g62570 : 169.0) Calmodulin binding protein-like; FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT4G25800.2). & (reliability: 338.0) & (original description: Putative PGSC0003DMG400024477, Description = , PFAM = PF07887;PF07887)' T '30.3' 'signalling.calcium' 'niben101scf01463_876041-882705' '(at5g62570 : 456.0) Calmodulin binding protein-like; FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT4G25800.2). & (gnl|cdd|71325 : 395.0) no description available & (reliability: 912.0) & (original description: Putative CBP60A, Description = Calmodulin-binding protein 60 A, PFAM = PF07887)' T '30.3' 'signalling.calcium' 'niben101scf01478_944674-948066' '(at5g08580 : 119.0) Calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT4G27790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39424 : 89.3) no description available & (reliability: 238.0) & (original description: Putative At5g08580, Description = Calcium-binding EF hand family protein, PFAM = PF13833;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf01556_478181-484428' '(at4g05520 : 796.0) Encodes AtEHD2, one of the Arabidopsis Eps15 homology domain proteins involved in endocytosis (AtEHD1, At3g20290).; EPS15 homology domain 2 (EHD2); FUNCTIONS IN: GTP binding, GTPase activity, calcium ion binding; INVOLVED IN: endocytosis; LOCATED IN: plasma membrane, microsome, membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EPS15 homology (EH) (InterPro:IPR000261), Dynamin, GTPase domain (InterPro:IPR001401), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: EPS15 homology domain 1 (TAIR:AT3G20290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37165 : 586.0) no description available & (gnl|cdd|84713 : 99.2) no description available & (reliability: 1592.0) & (original description: Putative ehd4, Description = Ehd4 protein, PFAM = PF00350;PF16880;PF12763)' T '30.3' 'signalling.calcium' 'niben101scf01574_888636-891822' '(at2g15760 : 137.0) Protein of unknown function (DUF1645); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT2G26530.2); Has 171 Blast hits to 167 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|71256 : 84.4) no description available & (reliability: 274.0) & (original description: Putative At2g15760, Description = At2g15760, PFAM = PF07816)' T '30.3' 'signalling.calcium' 'niben101scf01582_166663-172407' '(at4g32060 : 466.0) calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); Has 1096 Blast hits to 1078 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 829; Fungi - 82; Plants - 97; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|37854 : 319.0) no description available & (reliability: 932.0) & (original description: Putative glysoja_011637, Description = Calcium uptake protein 1, mitochondrial, PFAM = PF13833;PF13833;PF00036)' T '30.3' 'signalling.calcium' 'niben101scf01596_1089127-1094567' '(q39817|calx_soybn : 630.0) Calnexin homolog precursor - Glycine max (Soybean) & (at5g61790 : 621.0) calnexin 1 (CNX1); FUNCTIONS IN: unfolded protein binding, calcium ion binding; INVOLVED IN: protein folding; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P (InterPro:IPR009033), Calreticulin/calnexin (InterPro:IPR001580), Calreticulin/calnexin, conserved site (InterPro:IPR018124), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); BEST Arabidopsis thaliana protein match is: Calreticulin family protein (TAIR:AT5G07340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35894 : 528.0) no description available & (gnl|cdd|84651 : 432.0) no description available & (reliability: 1242.0) & (original description: Putative CNX1, Description = Calnexin homolog 1, PFAM = PF00262)' T '30.3' 'signalling.calcium' 'niben101scf01596_1189013-1194851' '(q39817|calx_soybn : 595.0) Calnexin homolog precursor - Glycine max (Soybean) & (at5g61790 : 586.0) calnexin 1 (CNX1); FUNCTIONS IN: unfolded protein binding, calcium ion binding; INVOLVED IN: protein folding; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P (InterPro:IPR009033), Calreticulin/calnexin (InterPro:IPR001580), Calreticulin/calnexin, conserved site (InterPro:IPR018124), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); BEST Arabidopsis thaliana protein match is: Calreticulin family protein (TAIR:AT5G07340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35894 : 532.0) no description available & (gnl|cdd|84651 : 429.0) no description available & (reliability: 1172.0) & (original description: Putative CANX, Description = Calnexin, PFAM = PF00262)' T '30.3' 'signalling.calcium' 'niben101scf01634_425168-429476' '(at5g03960 : 167.0) IQ-domain 12 (IQD12); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 11 (TAIR:AT5G13460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative POPTR_0001s05840g, Description = Calmodulin-binding family protein, PFAM = PF13178;PF00612;PF00612)' T '30.3' 'signalling.calcium' 'niben101scf01634_688077-701379' '(at2g41560 : 1389.0) encodes a calmodulin-regulated Ca(2+)-ATPase that improves salt tolerance in yeast. localized to the vacuole.; "autoinhibited Ca(2+)-ATPase, isoform 4" (ACA4); FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: in 6 processes; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: autoinhibited Ca2+-ATPase 11 (TAIR:AT3G57330.1); Has 45699 Blast hits to 34603 proteins in 3211 species: Archae - 845; Bacteria - 31242; Metazoa - 4073; Fungi - 2705; Plants - 2048; Viruses - 3; Other Eukaryotes - 4783 (source: NCBI BLink). & (gnl|cdd|35425 : 1351.0) no description available & (q2qy12|aca4_orysa : 1343.0) Probable calcium-transporting ATPase 4, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 4) - Oryza sativa (Rice) & (gnl|cdd|30822 : 600.0) no description available & (reliability: 2778.0) & (original description: Putative ACA4, Description = Calcium-transporting ATPase 4, plasma membrane-type, PFAM = PF12515;PF00690;PF00122;PF00689;PF00702)' T '30.3' 'signalling.calcium' 'niben101scf01685_960731-963087' '(at4g27280 : 112.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to karrikin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: pinoid-binding protein 1 (TAIR:AT5G54490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative ccd1, Description = Calcium-binding EF-hand protein, PFAM = PF13833)' T '30.3' 'signalling.calcium' 'niben101scf01696_648023-662574' '(at5g28830 : 280.0) calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT4G38810.2); Has 259 Blast hits to 210 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative BnaC09g02790D, Description = BnaC09g02790D protein, PFAM = )' T '30.3' 'signalling.calcium' 'niben101scf01697_2345342-2352960' '(at4g32060 : 467.0) calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); Has 1096 Blast hits to 1078 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 829; Fungi - 82; Plants - 97; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|37854 : 318.0) no description available & (reliability: 934.0) & (original description: Putative pco137410b, Description = Calcium uptake protein 1, mitochondrial, PFAM = PF13833;PF13833;PF00036)' T '30.3' 'signalling.calcium' 'niben101scf01740_1429936-1454831' '(at1g08860 : 753.0) Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Overexpression of this gene suppresses bon1-1 phenotypes. Double mutant analyses with bon1-1 suggest that BON1 and BON3 have overlapping functions in maintaining cellular homeostasis and inhibiting cell death.; BONZAI 3 (BON3); FUNCTIONS IN: calcium-dependent phospholipid binding; INVOLVED IN: N-terminal protein myristoylation, cellular homeostasis, positive regulation of cellular defense response, negative regulation of cell death; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.4); Has 1559 Blast hits to 1479 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 903; Fungi - 12; Plants - 319; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). & (gnl|cdd|36541 : 500.0) no description available & (gnl|cdd|29232 : 302.0) no description available & (reliability: 1506.0) & (original description: Putative BON3, Description = Protein BONZAI 3, PFAM = PF07002;PF00168;PF00168)' T '30.3' 'signalling.calcium' 'niben101scf01740_1447901-1454795' '(at1g08860 : 397.0) Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Overexpression of this gene suppresses bon1-1 phenotypes. Double mutant analyses with bon1-1 suggest that BON1 and BON3 have overlapping functions in maintaining cellular homeostasis and inhibiting cell death.; BONZAI 3 (BON3); FUNCTIONS IN: calcium-dependent phospholipid binding; INVOLVED IN: N-terminal protein myristoylation, cellular homeostasis, positive regulation of cellular defense response, negative regulation of cell death; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.4); Has 1559 Blast hits to 1479 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 903; Fungi - 12; Plants - 319; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). & (gnl|cdd|36541 : 295.0) no description available & (gnl|cdd|29232 : 275.0) no description available & (reliability: 794.0) & (original description: Putative cpnC, Description = Calcium-dependent phospholipid-binding copine family protein, PFAM = PF07002;PF07002)' T '30.3' 'signalling.calcium' 'niben101scf01752_582809-601668' '(at3g20290 : 813.0) Encodes AtEHD1, one of the Arabidopsis Eps15 homology domain proteins involved in endocytosis (AtEHD2, At4g05520).; EPS15 homology domain 1 (EHD1); FUNCTIONS IN: GTP binding, GTPase activity, calcium ion binding; INVOLVED IN: endocytosis; LOCATED IN: endosome, microsome, membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EPS15 homology (EH) (InterPro:IPR000261), Dynamin, GTPase domain (InterPro:IPR001401), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: EPS15 homology domain 2 (TAIR:AT4G05520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37165 : 606.0) no description available & (gnl|cdd|84713 : 98.1) no description available & (reliability: 1626.0) & (original description: Putative EHD1, Description = EH domain-containing protein 1, PFAM = PF16880;PF00350;PF12763)' T '30.3' 'signalling.calcium' 'niben101scf01764_166806-169342' '(at1g18530 : 216.0) EF hand calcium-binding protein family; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G25600.1); Has 21367 Blast hits to 15094 proteins in 1525 species: Archae - 2; Bacteria - 175; Metazoa - 8057; Fungi - 4921; Plants - 4996; Viruses - 2; Other Eukaryotes - 3214 (source: NCBI BLink). & (gnl|cdd|35250 : 122.0) no description available & (p27164|calm3_pethy : 109.0) Calmodulin-related protein - Petunia hybrida (Petunia) & (gnl|cdd|34727 : 94.5) no description available & (reliability: 432.0) & (original description: Putative CML15, Description = Probable calcium-binding protein CML15, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf01777_294364-298171' '(at2g26180 : 310.0) IQ-domain 6 (IQD6); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 8 (TAIR:AT1G72670.1); Has 885 Blast hits to 872 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 22; Fungi - 10; Plants - 828; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 620.0) & (original description: Putative iqd2, Description = Protein IQ-DOMAIN 1, PFAM = PF13178;PF00612)' T '30.3' 'signalling.calcium' 'niben101scf01812_349842-357705' '(at2g38910 : 836.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 20 (CPK20); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium dependent protein kinase 1 (TAIR:AT5G04870.1); Has 134628 Blast hits to 127183 proteins in 3957 species: Archae - 159; Bacteria - 14419; Metazoa - 50012; Fungi - 17942; Plants - 28393; Viruses - 493; Other Eukaryotes - 23210 (source: NCBI BLink). & (p28583|cdpk_soybn : 665.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (gnl|cdd|35255 : 402.0) no description available & (gnl|cdd|29142 : 280.0) no description available & (reliability: 1672.0) & (original description: Putative CPK20, Description = Calcium-dependent protein kinase 20, PFAM = PF00069;PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf01927_309255-313818' '(at3g16490 : 144.0) IQ-domain 26 (IQD26); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 27 (TAIR:AT1G51960.1); Has 778 Blast hits to 763 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 10; Plants - 755; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative IQD3, Description = Calmodulin-binding family protein, PFAM = PF13178;PF00612;PF00612)' T '30.3' 'signalling.calcium' 'niben101scf01998_368254-372530' '(at4g33050 : 555.0) embryo sac development arrest 39 (EDA39); FUNCTIONS IN: calmodulin binding; INVOLVED IN: polar nucleus fusion, response to chitin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT2G26190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1110.0) & (original description: Putative IQM1, Description = IQ domain-containing protein IQM1, PFAM = )' T '30.3' 'signalling.calcium' 'niben101scf01998_412703-417170' '(at2g26180 : 337.0) IQ-domain 6 (IQD6); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 8 (TAIR:AT1G72670.1); Has 885 Blast hits to 872 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 22; Fungi - 10; Plants - 828; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 674.0) & (original description: Putative IQD3, Description = Calmodulin binding protein IQD22, PFAM = PF13178)' T '30.3' 'signalling.calcium' 'niben101scf01999_370993-384278' '(at3g56690 : 888.0) encodes a protein similar to ATPases and binds to calmodulin in vitro. This is a single-copy gene and is expressed in all tissues examined.; Cam interacting protein 111 (CIP111); FUNCTIONS IN: ATPase activity, calmodulin binding; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 63578 Blast hits to 32942 proteins in 3240 species: Archae - 2541; Bacteria - 24762; Metazoa - 9322; Fungi - 6853; Plants - 5967; Viruses - 72; Other Eukaryotes - 14061 (source: NCBI BLink). & (gnl|cdd|35952 : 654.0) no description available & (q96372|cdc48_capan : 424.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (gnl|cdd|30812 : 293.0) no description available & (reliability: 1776.0) & (original description: Putative CIP111, Description = Calmodulin-interacting protein 111, PFAM = PF00004;PF00004)' T '30.3' 'signalling.calcium' 'niben101scf02011_793421-804421' '(at5g24270 : 262.0) encodes a calcium sensor that is essential for K+ nutrition, K+/Na+ selectivity, and salt tolerance. The protein is similar to calcineurin B. Lines carrying recessive mutations are hypersensitive to Na+ and Li+ stresses and is unable to grow in low K+. The growth defect is rescued by extracellular calcium.; SALT OVERLY SENSITIVE 3 (SOS3); CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like protein 8 (TAIR:AT1G64480.1). & (gnl|cdd|35257 : 151.0) no description available & (reliability: 524.0) & (original description: Putative cbl, Description = Calcineurin B-like molecule, PFAM = PF13202;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf02015_739349-749143' '(at3g13460 : 421.0) Physically interacts with CIPK1.; evolutionarily conserved C-terminal region 2 (ECT2); FUNCTIONS IN: protein binding; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 4 (TAIR:AT1G55500.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37112 : 352.0) no description available & (gnl|cdd|67749 : 160.0) no description available & (reliability: 842.0) & (original description: Putative BnaC05g47600D, Description = BnaA05g37280D protein, PFAM = PF04146)' T '30.3' 'signalling.calcium' 'niben101scf02039_504658-523634' '(at5g03040 : 220.0) IQ-domain 2 (iqd2); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 1 (TAIR:AT3G09710.1). & (reliability: 440.0) & (original description: Putative pco155237, Description = Orphans transcription factor, PFAM = PF00612)' T '30.3' 'signalling.calcium' 'niben101scf02077_445781-452387' '(at5g62570 : 418.0) Calmodulin binding protein-like; FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT4G25800.2). & (gnl|cdd|71325 : 375.0) no description available & (reliability: 836.0) & (original description: Putative Os01g0134700, Description = Calmodulin-binding protein-like, PFAM = PF07887)' T '30.3' 'signalling.calcium' 'niben101scf02085_1455170-1464707' '(at3g51850 : 921.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 13 (CPK13); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 30 (TAIR:AT1G74740.1); Has 124889 Blast hits to 118841 proteins in 3848 species: Archae - 180; Bacteria - 14009; Metazoa - 46910; Fungi - 16716; Plants - 24454; Viruses - 407; Other Eukaryotes - 22213 (source: NCBI BLink). & (p53683|cdpk2_orysa : 536.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (gnl|cdd|35255 : 375.0) no description available & (gnl|cdd|29142 : 263.0) no description available & (reliability: 1842.0) & (original description: Putative CPK13, Description = Calcium-dependent protein kinase 13, PFAM = PF00069;PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf02107_417007-428239' '(at4g32060 : 486.0) calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); Has 1096 Blast hits to 1078 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 829; Fungi - 82; Plants - 97; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|37854 : 349.0) no description available & (reliability: 972.0) & (original description: Putative glysoja_032340, Description = Calcium uptake protein 1, mitochondrial, PFAM = PF13202;PF00036;PF13833)' T '30.3' 'signalling.calcium' 'niben101scf02195_128645-133866' '(at3g50770 : 164.0) calmodulin-like 41 (CML41); FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin-like 38 (TAIR:AT1G76650.3); Has 18492 Blast hits to 11277 proteins in 1402 species: Archae - 0; Bacteria - 68; Metazoa - 6531; Fungi - 4523; Plants - 4805; Viruses - 0; Other Eukaryotes - 2565 (source: NCBI BLink). & (gnl|cdd|35250 : 110.0) no description available & (p04352|calm_chlre : 84.0) Calmodulin (CaM) - Chlamydomonas reinhardtii & (reliability: 328.0) & (original description: Putative CML41, Description = Probable calcium-binding protein CML41, PFAM = PF13833;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf02245_66592-69062' '(at1g66400 : 130.0) Encodes a calmodulin-like protein. Regulates nitric oxide levels and transition to flowering.; calmodulin like 23 (CML23); FUNCTIONS IN: calcium ion binding; INVOLVED IN: regulation of flower development, regulation of nitric oxide metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family (TAIR:AT5G37770.1); Has 30871 Blast hits to 18969 proteins in 1622 species: Archae - 1; Bacteria - 165; Metazoa - 12615; Fungi - 7465; Plants - 6190; Viruses - 4; Other Eukaryotes - 4431 (source: NCBI BLink). & (gnl|cdd|35250 : 120.0) no description available & (p04352|calm_chlre : 88.6) Calmodulin (CaM) - Chlamydomonas reinhardtii & (gnl|cdd|34727 : 85.7) no description available & (reliability: 260.0) & (original description: Putative cbl1, Description = Calcium binding protein, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf02282_63842-70763' '(at4g37640 : 1683.0) Encodes a calmodulin-regulated Ca(2+)-pump located in the endoplasmic reticulum. Belongs to plant 2B ATPase's with an N-terminal autoinhibitor.; calcium ATPase 2 (ACA2); FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding, calcium ion transmembrane transporter activity; INVOLVED IN: transport; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: Cation transporter/ E1-E2 ATPase family protein (TAIR:AT2G22950.1); Has 47430 Blast hits to 34684 proteins in 3201 species: Archae - 904; Bacteria - 32793; Metazoa - 4036; Fungi - 2849; Plants - 2078; Viruses - 3; Other Eukaryotes - 4767 (source: NCBI BLink). & (q2qmx9|aca1_orysa : 1583.0) Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) - Oryza sativa (Rice) & (gnl|cdd|35425 : 1415.0) no description available & (gnl|cdd|30822 : 579.0) no description available & (reliability: 3366.0) & (original description: Putative ACA2, Description = Calcium-transporting ATPase 2, plasma membrane-type, PFAM = PF13246;PF00122;PF12515;PF00690;PF00689)' T '30.3' 'signalling.calcium' 'niben101scf02305_27259-29600' '(at4g27280 : 115.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to karrikin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: pinoid-binding protein 1 (TAIR:AT5G54490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative ccd1, Description = EF-hand Ca2+-binding protein CCD1, PFAM = PF13833)' T '30.3' 'signalling.calcium' 'niben101scf02408_11394-13210' '(at2g15680 : 190.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family (TAIR:AT5G37770.1); Has 22221 Blast hits to 15732 proteins in 1476 species: Archae - 2; Bacteria - 203; Metazoa - 8340; Fungi - 5009; Plants - 5639; Viruses - 0; Other Eukaryotes - 3028 (source: NCBI BLink). & (gnl|cdd|35250 : 107.0) no description available & (gnl|cdd|34727 : 89.9) no description available & (p04352|calm_chlre : 82.4) Calmodulin (CaM) - Chlamydomonas reinhardtii & (reliability: 380.0) & (original description: Putative CML1, Description = Calmodulin-like protein 1, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf02413_342273-351660' '(at5g57580 : 795.0) Calmodulin-binding protein; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT4G25800.2); Has 341 Blast hits to 322 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 339; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|71325 : 510.0) no description available & (reliability: 1590.0) & (original description: Putative CBP60B, Description = Calmodulin-binding protein 60 B, PFAM = PF07887)' T '30.3' 'signalling.calcium' 'niben101scf02420_469089-471529' '(at1g12310 : 243.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, nucleus, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G62820.1); Has 15156 Blast hits to 13043 proteins in 1439 species: Archae - 0; Bacteria - 35; Metazoa - 6065; Fungi - 3861; Plants - 3197; Viruses - 0; Other Eukaryotes - 1998 (source: NCBI BLink). & (p27164|calm3_pethy : 131.0) Calmodulin-related protein - Petunia hybrida (Petunia) & (gnl|cdd|35250 : 117.0) no description available & (gnl|cdd|34727 : 108.0) no description available & (reliability: 482.0) & (original description: Putative calA, Description = Calmodulin, PFAM = PF13405;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf02455_128338-131523' '(at3g18430 : 216.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: calmodulin 9 (TAIR:AT3G51920.1). & (gnl|cdd|35257 : 98.1) no description available & (reliability: 432.0) & (original description: Putative CNB, Description = Calcineurin subunit B, PFAM = PF13499)' T '30.3' 'signalling.calcium' 'niben101scf02455_128369-145519' '(at3g18430 : 213.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: calmodulin 9 (TAIR:AT3G51920.1). & (gnl|cdd|35257 : 95.0) no description available & (reliability: 426.0) & (original description: Putative At3g18430, Description = Calcineurin subunit B, PFAM = PF13499)' T '30.3' 'signalling.calcium' 'niben101scf02474_108914-124349' '(at3g18430 : 265.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: calmodulin 9 (TAIR:AT3G51920.1). & (gnl|cdd|35257 : 115.0) no description available & (reliability: 530.0) & (original description: Putative CNB, Description = Protein phosphatase 3, regulatory subunit, PFAM = PF13499)' T '30.3' 'signalling.calcium' 'niben101scf02510_572759-589966' '(at2g27480 : 204.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G04170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35260 : 182.0) no description available & (reliability: 408.0) & (original description: Putative CML48, Description = Probable calcium-binding protein CML48, PFAM = PF13202;PF00036)' T '30.3' 'signalling.calcium' 'niben101scf02565_27687-31852' '(at1g64480 : 227.0) calcineurin B-like protein 8, member of plant-specific family of calcium sensor proteins containing 3 EF-hand motifs; calcineurin B-like protein 8 (CBL8); CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Calcineurin B protein (InterPro:IPR015757), Recoverin (InterPro:IPR001125), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), EF-HAND 2 (InterPro:IPR018249); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G24270.2); Has 8036 Blast hits to 8016 proteins in 760 species: Archae - 0; Bacteria - 12; Metazoa - 3984; Fungi - 1032; Plants - 1911; Viruses - 0; Other Eukaryotes - 1097 (source: NCBI BLink). & (gnl|cdd|35257 : 160.0) no description available & (reliability: 454.0) & (original description: Putative CBL4, Description = Calcineurin B-like protein 4, PFAM = PF00036;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf02638_187757-202455' '(at4g32060 : 506.0) calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); Has 1096 Blast hits to 1078 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 829; Fungi - 82; Plants - 97; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|37854 : 348.0) no description available & (reliability: 1012.0) & (original description: Putative glysoja_032340, Description = Calcium uptake protein 1, mitochondrial, PFAM = PF00036;PF13202;PF13833)' T '30.3' 'signalling.calcium' 'niben101scf02755_620741-624742' '(at4g27790 : 303.0) Calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT5G08580.1); Has 4096 Blast hits to 3931 proteins in 669 species: Archae - 0; Bacteria - 5; Metazoa - 1396; Fungi - 738; Plants - 1509; Viruses - 0; Other Eukaryotes - 448 (source: NCBI BLink). & (gnl|cdd|39424 : 189.0) no description available & (reliability: 606.0) & (original description: Putative BnaA01g16670D, Description = BnaA01g16670D protein, PFAM = PF13202)' T '30.3' 'signalling.calcium' 'niben101scf02790_73827-78377' '(at5g57010 : 530.0) calmodulin-binding family protein; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT4G33050.3); Has 390 Blast hits to 271 proteins in 57 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 100; Plants - 264; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 1060.0) & (original description: Putative IQM5, Description = IQ domain-containing protein IQM5, PFAM = )' T '30.3' 'signalling.calcium' 'niben101scf02831_468556-473100' '(at1g72670 : 242.0) IQ-domain 8 (iqd8); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 7 (TAIR:AT1G17480.1); Has 845 Blast hits to 839 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 13; Plants - 782; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 484.0) & (original description: Putative IQD5, Description = Calmodulin binding protein IQD22, PFAM = PF00612;PF00612)' T '30.3' 'signalling.calcium' 'niben101scf02832_111190-116548' '(at4g34150 : 202.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: soybean gene regulated by cold-2 (TAIR:AT1G09070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36248 : 98.4) no description available & (reliability: 404.0) & (original description: Putative At4g34150, Description = AT4g34150/F28A23_90, PFAM = PF00168)' T '30.3' 'signalling.calcium' 'niben101scf02840_460242-462832' '(at5g39670 : 97.8) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G29000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative CML30, Description = Putative calcium-binding protein CML30, PFAM = PF13499)' T '30.3' 'signalling.calcium' 'niben101scf02854_898806-905972' '(at5g37710 : 602.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity, calmodulin binding; INVOLVED IN: lipid catabolic process, lipid metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), Mono-/di-acylglycerol lipase, N-terminal (InterPro:IPR005592); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G49050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37299 : 316.0) no description available & (gnl|cdd|85661 : 98.5) no description available & (reliability: 1204.0) & (original description: Putative CaMBP, Description = Calmodulin-binding protein, PFAM = PF03893;PF01764)' T '30.3' 'signalling.calcium' 'niben101scf02891_162796-184744' '(q6ret7|ccamk_medtr : 723.0) Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3 (EC 2.7.11.17) (Does not make infections protein 3) (CCaMK DMI3) (MtCCaMK) - Medicago truncatula (Barrel medic) & (gnl|cdd|35255 : 249.0) no description available & (at5g12180 : 247.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 17 (CPK17); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of pollen tube growth, protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 34 (TAIR:AT5G19360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29142 : 243.0) no description available & (reliability: 494.0) & (original description: Putative CCAMK, Description = Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase, PFAM = PF00069;PF13202;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf02922_297031-301661' '(at5g15430 : 87.8) Plant calmodulin-binding protein-related; CONTAINS InterPro DOMAIN/s: Calmodulin-binding protein, plant (InterPro:IPR012417); BEST Arabidopsis thaliana protein match is: Plant calmodulin-binding protein-related (TAIR:AT5G39380.1); Has 2981 Blast hits to 2520 proteins in 284 species: Archae - 2; Bacteria - 98; Metazoa - 1113; Fungi - 263; Plants - 238; Viruses - 17; Other Eukaryotes - 1250 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative , Description = , PFAM = PF07839)' T '30.3' 'signalling.calcium' 'niben101scf02971_368475-376481' '(at1g53590 : 743.0) NTMC2T6.1; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G14590.2); Has 5916 Blast hits to 4916 proteins in 346 species: Archae - 2; Bacteria - 105; Metazoa - 3154; Fungi - 722; Plants - 1160; Viruses - 7; Other Eukaryotes - 766 (source: NCBI BLink). & (gnl|cdd|34643 : 128.0) no description available & (reliability: 1442.0) & (original description: Putative NTMC2T6.1, Description = C2 domain-containing protein At1g53590, PFAM = PF00168)' T '30.3' 'signalling.calcium' 'niben101scf02972_239604-245416' '(at5g24270 : 199.0) encodes a calcium sensor that is essential for K+ nutrition, K+/Na+ selectivity, and salt tolerance. The protein is similar to calcineurin B. Lines carrying recessive mutations are hypersensitive to Na+ and Li+ stresses and is unable to grow in low K+. The growth defect is rescued by extracellular calcium.; SALT OVERLY SENSITIVE 3 (SOS3); CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like protein 8 (TAIR:AT1G64480.1). & (gnl|cdd|35257 : 120.0) no description available & (reliability: 398.0) & (original description: Putative CBL5, Description = Calcineurin B-like protein 5, PFAM = PF13202;PF13202;PF00036)' T '30.3' 'signalling.calcium' 'niben101scf02983_19381-26669' '(at5g54130 : 691.0) Calcium-binding endonuclease/exonuclease/phosphatase family; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Calcium-binding endonuclease/exonuclease/phosphatase family (TAIR:AT1G02270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37549 : 237.0) no description available & (reliability: 1382.0) & (original description: Putative At1g02270, Description = Uncharacterized calcium-binding protein At1g02270, PFAM = PF03372)' T '30.3' 'signalling.calcium' 'niben101scf03049_25833-28327' '(at5g49480 : 119.0) AtCP1 encodes a novel Ca2+-binding protein, which shares sequence similarities with calmodulins. The expression of AtCP1 is induced by NaCl.; Ca2+-binding protein 1 (CP1); FUNCTIONS IN: calcium ion binding; INVOLVED IN: hyperosmotic salinity response; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 1 (TAIR:AT5G37780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative CP1, Description = AT5g49480, PFAM = PF13405;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf03064_68133-75491' '(at4g28600 : 590.0) encodes a calmodulin-binding protein that is expressed in pollen, suspension culture cells, flowers, and fruits.; no pollen germination related 2 (NPGR2); FUNCTIONS IN: calmodulin binding; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT2G43040.1); Has 2060 Blast hits to 1763 proteins in 357 species: Archae - 278; Bacteria - 547; Metazoa - 329; Fungi - 78; Plants - 247; Viruses - 0; Other Eukaryotes - 581 (source: NCBI BLink). & (gnl|cdd|39364 : 478.0) no description available & (reliability: 1180.0) & (original description: Putative NPG, Description = Tetratricopeptide repeat protein 7B, PFAM = PF13181)' T '30.3' 'signalling.calcium' 'niben101scf03069_61434-64206' '(at1g12310 : 251.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, nucleus, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G62820.1); Has 15156 Blast hits to 13043 proteins in 1439 species: Archae - 0; Bacteria - 35; Metazoa - 6065; Fungi - 3861; Plants - 3197; Viruses - 0; Other Eukaryotes - 1998 (source: NCBI BLink). & (p04352|calm_chlre : 138.0) Calmodulin (CaM) - Chlamydomonas reinhardtii & (gnl|cdd|35250 : 120.0) no description available & (gnl|cdd|34727 : 109.0) no description available & (reliability: 498.0) & (original description: Putative zbf3, Description = Calmodulin, PFAM = PF13405;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf03069_349076-356070' '(p27164|calm3_pethy : 273.0) Calmodulin-related protein - Petunia hybrida (Petunia) & (at2g27030 : 259.0) encodes a calmodulin that has higher affinity to kinesin-like calmodulin binding motor protein than CAM4 or CAM6.; calmodulin 5 (CAM5); FUNCTIONS IN: calcium ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 3 (TAIR:AT3G56800.1); Has 36011 Blast hits to 23475 proteins in 1766 species: Archae - 4; Bacteria - 234; Metazoa - 15635; Fungi - 7487; Plants - 7311; Viruses - 0; Other Eukaryotes - 5340 (source: NCBI BLink). & (gnl|cdd|35250 : 165.0) no description available & (gnl|cdd|34727 : 159.0) no description available & (reliability: 518.0) & (original description: Putative CAM53, Description = Calmodulin-related protein, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf03100_183735-186448' '(at2g43290 : 132.0) Encodes calmodulin-like MSS3.; multicopy suppressors of snf4 deficiency in yeast 3 (MSS3); FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G59440.1); Has 26796 Blast hits to 17896 proteins in 1618 species: Archae - 9; Bacteria - 273; Metazoa - 11544; Fungi - 5684; Plants - 5303; Viruses - 2; Other Eukaryotes - 3981 (source: NCBI BLink). & (gnl|cdd|35250 : 116.0) no description available & (reliability: 264.0) & (original description: Putative cbp1, Description = EF hand calcium-binding family protein, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf03104_368628-383916' '(at4g21820 : 986.0) binding;calmodulin binding; FUNCTIONS IN: calmodulin binding, binding; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Armadillo (InterPro:IPR000225), Calponin-like actin-binding (InterPro:IPR001715), Armadillo-type fold (InterPro:IPR016024), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin 2 (TAIR:AT5G43900.1); Has 3955 Blast hits to 2210 proteins in 242 species: Archae - 0; Bacteria - 4; Metazoa - 3047; Fungi - 265; Plants - 324; Viruses - 0; Other Eukaryotes - 315 (source: NCBI BLink). & (gnl|cdd|35387 : 319.0) no description available & (reliability: 1972.0) & (original description: Putative BnaA01g11650D, Description = BnaA01g11650D protein, PFAM = PF00612;PF00612;PF00612;PF00612;PF00612;PF00612;PF00612;PF00612;PF00307;PF00514)' T '30.3' 'signalling.calcium' 'niben101scf03205_88932-93485' '(at3g13600 : 623.0) calmodulin-binding family protein; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT3G58480.1); Has 2440 Blast hits to 1727 proteins in 273 species: Archae - 4; Bacteria - 163; Metazoa - 734; Fungi - 252; Plants - 308; Viruses - 55; Other Eukaryotes - 924 (source: NCBI BLink). & (reliability: 1246.0) & (original description: Putative IQM6, Description = IQ domain-containing protein IQM6, PFAM = )' T '30.3' 'signalling.calcium' 'niben101scf03205_89076-91599' '(at3g13600 : 151.0) calmodulin-binding family protein; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT3G58480.1); Has 2440 Blast hits to 1727 proteins in 273 species: Archae - 4; Bacteria - 163; Metazoa - 734; Fungi - 252; Plants - 308; Viruses - 55; Other Eukaryotes - 924 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative IQM2, Description = Calmodulin-binding family protein, PFAM = )' T '30.3' 'signalling.calcium' 'niben101scf03337_709276-714986' '(at1g73440 : 110.0) calmodulin-related; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Ubiquitin interacting motif (InterPro:IPR003903); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT4G00140.1); Has 2048 Blast hits to 2029 proteins in 336 species: Archae - 0; Bacteria - 7; Metazoa - 605; Fungi - 146; Plants - 781; Viruses - 0; Other Eukaryotes - 509 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative PGSC0003DMG400025974, Description = Calmodulin-related, putative isoform 1, PFAM = PF13499)' T '30.3' 'signalling.calcium' 'niben101scf03377_483481-489827' '(at5g04870 : 907.0) A calcium-dependent protein kinase that can phosphorylate phenylalanine ammonia lyase (PAL), a key enzyme in pathogen defense.; calcium dependent protein kinase 1 (CPK1); FUNCTIONS IN: protein binding, calmodulin-dependent protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: peroxisome, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calmodulin-domain protein kinase cdpk isoform 2 (TAIR:AT3G10660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p28583|cdpk_soybn : 700.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (gnl|cdd|35255 : 406.0) no description available & (gnl|cdd|29142 : 279.0) no description available & (reliability: 1814.0) & (original description: Putative CPK1, Description = Calcium-dependent protein kinase 1, PFAM = PF13499;PF13499;PF00069)' T '30.3' 'signalling.calcium' 'niben101scf03449_108700-113734' '(at1g27460 : 806.0) encodes a calmodulin-binding protein that is expressed in pollen, suspension culture cells, flowers, and fruits.; no pollen germination related 1 (NPGR1); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT2G43040.1); Has 2043 Blast hits to 1708 proteins in 322 species: Archae - 185; Bacteria - 626; Metazoa - 573; Fungi - 23; Plants - 162; Viruses - 0; Other Eukaryotes - 474 (source: NCBI BLink). & (gnl|cdd|39364 : 503.0) no description available & (reliability: 1612.0) & (original description: Putative NPGR1, Description = At1g27460/F17L21_26, PFAM = )' T '30.3' 'signalling.calcium' 'niben101scf03457_162872-169271' '(at3g59690 : 228.0) IQ-domain 13 (IQD13); FUNCTIONS IN: calmodulin binding; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 14 (TAIR:AT2G43680.1); Has 1694 Blast hits to 1201 proteins in 100 species: Archae - 0; Bacteria - 16; Metazoa - 93; Fungi - 40; Plants - 1224; Viruses - 44; Other Eukaryotes - 277 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative , Description = ARAD1A13222p, PFAM = PF13178)' T '30.3' 'signalling.calcium' 'niben101scf03531_44877-49171' '(at5g57110 : 209.0) Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane.; "autoinhibited Ca2+ -ATPase, isoform 8" (ACA8); FUNCTIONS IN: protein self-association, calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: autoinhibited Ca(2+)-ATPase 10 (TAIR:AT4G29900.1); Has 45517 Blast hits to 34552 proteins in 3221 species: Archae - 872; Bacteria - 31142; Metazoa - 4022; Fungi - 2709; Plants - 2112; Viruses - 3; Other Eukaryotes - 4657 (source: NCBI BLink). & (gnl|cdd|35425 : 205.0) no description available & (q2ras0|aca5_orysa : 151.0) Probable calcium-transporting ATPase 5, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 5) - Oryza sativa (Rice) & (gnl|cdd|30822 : 119.0) no description available & (reliability: 408.0) & (original description: Putative PGSC0003DMG400010018, Description = , PFAM = PF00689;PF00122)' T '30.3' 'signalling.calcium' 'niben101scf03548_216550-231095' '(at5g61910 : 806.0) DCD (Development and Cell Death) domain protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 membrane targeting protein (InterPro:IPR018029), Kelch related (InterPro:IPR013089), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Calcium-dependent phospholipid-binding Copine family protein (TAIR:AT5G61900.3). & (gnl|cdd|36541 : 513.0) no description available & (gnl|cdd|29232 : 318.0) no description available & (reliability: 1610.0) & (original description: Putative BON2, Description = Protein BONZAI 2, PFAM = PF00168;PF00168;PF07002)' T '30.3' 'signalling.calcium' 'niben101scf03573_111590-125290' '(at2g27030 : 171.0) encodes a calmodulin that has higher affinity to kinesin-like calmodulin binding motor protein than CAM4 or CAM6.; calmodulin 5 (CAM5); FUNCTIONS IN: calcium ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 3 (TAIR:AT3G56800.1); Has 36011 Blast hits to 23475 proteins in 1766 species: Archae - 4; Bacteria - 234; Metazoa - 15635; Fungi - 7487; Plants - 7311; Viruses - 0; Other Eukaryotes - 5340 (source: NCBI BLink). & (p27164|calm3_pethy : 171.0) Calmodulin-related protein - Petunia hybrida (Petunia) & (gnl|cdd|35250 : 121.0) no description available & (gnl|cdd|34727 : 115.0) no description available & (reliability: 342.0) & (original description: Putative CML8, Description = Calmodulin-like protein 8, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf03634_981385-992857' '(at5g04870 : 800.0) A calcium-dependent protein kinase that can phosphorylate phenylalanine ammonia lyase (PAL), a key enzyme in pathogen defense.; calcium dependent protein kinase 1 (CPK1); FUNCTIONS IN: protein binding, calmodulin-dependent protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: peroxisome, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calmodulin-domain protein kinase cdpk isoform 2 (TAIR:AT3G10660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p28583|cdpk_soybn : 687.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (gnl|cdd|35255 : 397.0) no description available & (gnl|cdd|29142 : 271.0) no description available & (reliability: 1600.0) & (original description: Putative cpk9, Description = Calcium-dependent protein kinase 1, PFAM = PF13499;PF00069;PF13833)' T '30.3' 'signalling.calcium' 'niben101scf03638_508779-511267' '(at3g03000 : 213.0) Calmodulin like protein localized in the plant vacuolar compartment with a function of binding and modifying the activity of a tonoplast transporter (AtNHX1) from within the vacuole in a Ca+2- and pH-dependent manner; EF hand calcium-binding protein family; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G32250.1); Has 24706 Blast hits to 18078 proteins in 1578 species: Archae - 2; Bacteria - 105; Metazoa - 9402; Fungi - 6368; Plants - 5242; Viruses - 0; Other Eukaryotes - 3587 (source: NCBI BLink). & (gnl|cdd|35250 : 136.0) no description available & (p04352|calm_chlre : 113.0) Calmodulin (CaM) - Chlamydomonas reinhardtii & (gnl|cdd|34727 : 104.0) no description available & (reliability: 426.0) & (original description: Putative CML17, Description = Probable calcium-binding protein CML17, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf03651_595864-601062' '(at3g10300 : 308.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G04170.1). & (gnl|cdd|35260 : 203.0) no description available & (reliability: 616.0) & (original description: Putative CML49, Description = Probable calcium-binding protein CML49, PFAM = PF00036;PF13405)' T '30.3' 'signalling.calcium' 'niben101scf03737_461140-463859' '(at2g43290 : 148.0) Encodes calmodulin-like MSS3.; multicopy suppressors of snf4 deficiency in yeast 3 (MSS3); FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G59440.1); Has 26796 Blast hits to 17896 proteins in 1618 species: Archae - 9; Bacteria - 273; Metazoa - 11544; Fungi - 5684; Plants - 5303; Viruses - 2; Other Eukaryotes - 3981 (source: NCBI BLink). & (gnl|cdd|35250 : 123.0) no description available & (p04352|calm_chlre : 91.7) Calmodulin (CaM) - Chlamydomonas reinhardtii & (gnl|cdd|34727 : 85.7) no description available & (reliability: 296.0) & (original description: Putative cbp1, Description = EF hand calcium-binding family protein, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf03757_373891-381684' '(at5g04870 : 761.0) A calcium-dependent protein kinase that can phosphorylate phenylalanine ammonia lyase (PAL), a key enzyme in pathogen defense.; calcium dependent protein kinase 1 (CPK1); FUNCTIONS IN: protein binding, calmodulin-dependent protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: peroxisome, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calmodulin-domain protein kinase cdpk isoform 2 (TAIR:AT3G10660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p28583|cdpk_soybn : 669.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (gnl|cdd|35255 : 398.0) no description available & (gnl|cdd|29142 : 277.0) no description available & (reliability: 1522.0) & (original description: Putative CPK2, Description = Calcium-dependent protein kinase 2, PFAM = PF00069;PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf03761_105345-107707' '(at2g46600 : 154.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: pinoid-binding protein 1 (TAIR:AT5G54490.1); Has 2760 Blast hits to 2760 proteins in 443 species: Archae - 0; Bacteria - 4; Metazoa - 1146; Fungi - 226; Plants - 931; Viruses - 0; Other Eukaryotes - 453 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative KIC, Description = Calcium-binding protein KIC, PFAM = PF13833)' T '30.3' 'signalling.calcium' 'niben101scf03777_163500-169124' '(q39817|calx_soybn : 598.0) Calnexin homolog precursor - Glycine max (Soybean) & (at5g61790 : 594.0) calnexin 1 (CNX1); FUNCTIONS IN: unfolded protein binding, calcium ion binding; INVOLVED IN: protein folding; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P (InterPro:IPR009033), Calreticulin/calnexin (InterPro:IPR001580), Calreticulin/calnexin, conserved site (InterPro:IPR018124), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); BEST Arabidopsis thaliana protein match is: Calreticulin family protein (TAIR:AT5G07340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35894 : 534.0) no description available & (gnl|cdd|84651 : 430.0) no description available & (reliability: 1188.0) & (original description: Putative CNX1, Description = Calnexin homolog 1, PFAM = PF00262)' T '30.3' 'signalling.calcium' 'niben101scf03839_383863-389815' '(at4g33000 : 292.0) Encodes a member of the calcineurin B-like calcium sensor gene family. Mediates salt tolerance by regulating ion homeostasis in Arabidopsis.; calcineurin B-like protein 10 (CBL10); CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like 3 (TAIR:AT4G26570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35257 : 161.0) no description available & (reliability: 584.0) & (original description: Putative CBL10, Description = Calcineurin B-like protein 10, PFAM = PF13499;PF13833)' T '30.3' 'signalling.calcium' 'niben101scf03850_234688-249339' '(at5g24270 : 180.0) encodes a calcium sensor that is essential for K+ nutrition, K+/Na+ selectivity, and salt tolerance. The protein is similar to calcineurin B. Lines carrying recessive mutations are hypersensitive to Na+ and Li+ stresses and is unable to grow in low K+. The growth defect is rescued by extracellular calcium.; SALT OVERLY SENSITIVE 3 (SOS3); CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like protein 8 (TAIR:AT1G64480.1). & (gnl|cdd|35257 : 104.0) no description available & (reliability: 360.0) & (original description: Putative cbl, Description = Calcineurin B-like molecule, PFAM = PF00036;PF13202;PF13202)' T '30.3' 'signalling.calcium' 'niben101scf03852_95958-101556' '(at4g17615 : 337.0) Member of AtCBL (Calcineurin B-like Calcium Sensor Proteins) family. Protein level is increased upon high salt, mannitol, and cold stresses. CBL1 interacts with CIPK23 and recruits the kinase to the plasma membrane where the substrate(s) of CIPK23 may reside. CBL1 localization is regulated by protein modification including myristolation and acylation.; calcineurin B-like protein 1 (CBL1); FUNCTIONS IN: calcium ion binding; INVOLVED IN: in 8 processes; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like protein 9 (TAIR:AT5G47100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35257 : 155.0) no description available & (reliability: 674.0) & (original description: Putative CBL1, Description = Calcineurin B-like protein 1, PFAM = PF13499;PF13833)' T '30.3' 'signalling.calcium' 'niben101scf03927_92718-99538' '(gnl|cdd|35425 : 1316.0) no description available & (at3g63380 : 1227.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: calcium ion transport, cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT3G22910.1); Has 46574 Blast hits to 34715 proteins in 3214 species: Archae - 909; Bacteria - 32032; Metazoa - 4086; Fungi - 2666; Plants - 2162; Viruses - 3; Other Eukaryotes - 4716 (source: NCBI BLink). & (q2ras0|aca5_orysa : 769.0) Probable calcium-transporting ATPase 5, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 5) - Oryza sativa (Rice) & (gnl|cdd|30822 : 604.0) no description available & (reliability: 2454.0) & (original description: Putative ACA12, Description = Calcium-transporting ATPase 12, plasma membrane-type, PFAM = PF00689;PF00702;PF00690;PF00122)' T '30.3' 'signalling.calcium' 'niben101scf03927_350771-356017' '(gnl|cdd|35425 : 827.0) no description available & (at3g63380 : 781.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: calcium ion transport, cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT3G22910.1); Has 46574 Blast hits to 34715 proteins in 3214 species: Archae - 909; Bacteria - 32032; Metazoa - 4086; Fungi - 2666; Plants - 2162; Viruses - 3; Other Eukaryotes - 4716 (source: NCBI BLink). & (q2ras0|aca5_orysa : 494.0) Probable calcium-transporting ATPase 5, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 5) - Oryza sativa (Rice) & (gnl|cdd|30822 : 450.0) no description available & (reliability: 1562.0) & (original description: Putative PGSC0003DMG400043830, Description = Calcium-transporting ATPase, PFAM = PF00689;PF00690;PF00122)' T '30.3' 'signalling.calcium' 'niben101scf03953_384840-388076' '(at2g15760 : 107.0) Protein of unknown function (DUF1645); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT2G26530.2); Has 171 Blast hits to 167 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|71256 : 83.2) no description available & (reliability: 214.0) & (original description: Putative At2g15760, Description = At2g15760, PFAM = PF07816)' T '30.3' 'signalling.calcium' 'niben101scf04038_50065-52691' '(at3g10190 : 157.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT2G41410.1); Has 18786 Blast hits to 12756 proteins in 1414 species: Archae - 1; Bacteria - 149; Metazoa - 7817; Fungi - 3299; Plants - 4581; Viruses - 0; Other Eukaryotes - 2939 (source: NCBI BLink). & (gnl|cdd|35250 : 116.0) no description available & (gnl|cdd|34727 : 86.1) no description available & (p27164|calm3_pethy : 83.2) Calmodulin-related protein - Petunia hybrida (Petunia) & (reliability: 314.0) & (original description: Putative CML36, Description = Probable calcium-binding protein CML36, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf04081_56266-58814' '(at5g40190 : 243.0) Identified in a screen for calmodulin-binding proteins obtained from an auxin treated cDNA library.; RNA ligase/cyclic nucleotide phosphodiesterase family protein; FUNCTIONS IN: calmodulin binding; INVOLVED IN: RNA metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA ligase/cyclic nucleotide phosphodiesterase (InterPro:IPR009097); BEST Arabidopsis thaliana protein match is: RNA ligase/cyclic nucleotide phosphodiesterase family protein (TAIR:AT3G28140.1); Has 227 Blast hits to 227 proteins in 109 species: Archae - 0; Bacteria - 185; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative At3g28140, Description = Putative uncharacterized protein At3g28140/MMG15_15, PFAM = PF13563)' T '30.3' 'signalling.calcium' 'niben101scf04117_957899-965960' '(at4g26570 : 271.0) member of AtCBLs (Calcineurin B-like Calcium Sensor Proteins); calcineurin B-like 3 (CBL3); FUNCTIONS IN: calcium ion binding; INVOLVED IN: detection of calcium ion; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like protein 2 (TAIR:AT5G55990.1); Has 7988 Blast hits to 7953 proteins in 833 species: Archae - 0; Bacteria - 10; Metazoa - 3891; Fungi - 1253; Plants - 1902; Viruses - 0; Other Eukaryotes - 932 (source: NCBI BLink). & (gnl|cdd|35257 : 146.0) no description available & (reliability: 542.0) & (original description: Putative CBL3, Description = Calcineurin B-like protein 3, PFAM = )' T '30.3' 'signalling.calcium' 'niben101scf04123_174557-177159' '(q09011|cast_soltu : 211.0) Calcium-binding protein CAST - Solanum tuberosum (Potato) & (at4g20780 : 201.0) Calcium sensor involved in trichome branching.; calmodulin like 42 (CML42); FUNCTIONS IN: calcium ion binding; INVOLVED IN: trichome branching; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin like 43 (TAIR:AT5G44460.1); Has 15351 Blast hits to 11255 proteins in 1265 species: Archae - 0; Bacteria - 33; Metazoa - 5903; Fungi - 3155; Plants - 4145; Viruses - 2; Other Eukaryotes - 2113 (source: NCBI BLink). & (gnl|cdd|35250 : 102.0) no description available & (reliability: 402.0) & (original description: Putative CML21, Description = Calcium-binding protein CML42, PFAM = PF13499;PF13405)' T '30.3' 'signalling.calcium' 'niben101scf04133_346669-349232' '(at5g39670 : 112.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G29000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative BnaA07g14750D, Description = BnaA07g14750D protein, PFAM = PF13499)' T '30.3' 'signalling.calcium' 'niben101scf04216_798583-804095' '(at1g35670 : 800.0) Encodes a Ca(2+)-dependent, calmodulin-independent protein kinase that is rapidly induced by drought and high-salt stress but not by low-temperature stress or heat stress. Positive regulator of ABA signaling. Phosphorylates ABA responsive transcription factors ABF1 and ABF4.; calcium-dependent protein kinase 2 (CDPK2); FUNCTIONS IN: calmodulin-dependent protein kinase activity, kinase activity; INVOLVED IN: response to water deprivation, response to salt stress, protein amino acid phosphorylation, positive regulation of abscisic acid mediated signaling pathway; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 4 (TAIR:AT4G09570.1); Has 134131 Blast hits to 125244 proteins in 4234 species: Archae - 175; Bacteria - 14420; Metazoa - 49980; Fungi - 18055; Plants - 27559; Viruses - 606; Other Eukaryotes - 23336 (source: NCBI BLink). & (p28583|cdpk_soybn : 778.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (gnl|cdd|35255 : 404.0) no description available & (gnl|cdd|29142 : 284.0) no description available & (reliability: 1600.0) & (original description: Putative CPK11, Description = Calcium-dependent protein kinase 11, PFAM = PF13499;PF13499;PF00069)' T '30.3' 'signalling.calcium' 'niben101scf04217_547223-549663' '(at1g12310 : 243.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, nucleus, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G62820.1); Has 15156 Blast hits to 13043 proteins in 1439 species: Archae - 0; Bacteria - 35; Metazoa - 6065; Fungi - 3861; Plants - 3197; Viruses - 0; Other Eukaryotes - 1998 (source: NCBI BLink). & (p27164|calm3_pethy : 133.0) Calmodulin-related protein - Petunia hybrida (Petunia) & (gnl|cdd|35250 : 117.0) no description available & (gnl|cdd|34727 : 106.0) no description available & (reliability: 484.0) & (original description: Putative calA, Description = Calmodulin, PFAM = PF13405;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf04249_61953-65432' '(at3g13460 : 142.0) Physically interacts with CIPK1.; evolutionarily conserved C-terminal region 2 (ECT2); FUNCTIONS IN: protein binding; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 4 (TAIR:AT1G55500.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative ECT2, Description = CIPK1 interacting protein ECT2, PFAM = )' T '30.3' 'signalling.calcium' 'niben101scf04249_100004-105269' '(at3g13460 : 565.0) Physically interacts with CIPK1.; evolutionarily conserved C-terminal region 2 (ECT2); FUNCTIONS IN: protein binding; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 4 (TAIR:AT1G55500.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37112 : 385.0) no description available & (gnl|cdd|67749 : 161.0) no description available & (reliability: 1130.0) & (original description: Putative BnaA01g30090D, Description = BnaA01g30090D protein, PFAM = PF04146)' T '30.3' 'signalling.calcium' 'niben101scf04331_258530-262431' '(at4g14750 : 207.0) IQ-domain 19 (IQD19); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 26 (TAIR:AT3G16490.1); Has 2338 Blast hits to 1945 proteins in 201 species: Archae - 4; Bacteria - 168; Metazoa - 612; Fungi - 134; Plants - 1079; Viruses - 66; Other Eukaryotes - 275 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative IQD3, Description = Calmodulin-binding family protein, PFAM = PF00612;PF00612;PF13178)' T '30.3' 'signalling.calcium' 'niben101scf04375_451529-460951' '(at1g08450 : 531.0) Encodes one of three Arabidopsis calreticulins. In CRT-deficient mouse fibroblasts, this protein restores ER Ca2+ levels. Non-receptor component required for EFR-mediated immunity. Mutants show de-repressed anthocyanin accumulation in the presence of elf18, and EFR accumulation and signalling.; calreticulin 3 (CRT3); FUNCTIONS IN: unfolded protein binding, calcium ion binding; INVOLVED IN: in 6 processes; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P (InterPro:IPR009033), Calreticulin/calnexin (InterPro:IPR001580), Calreticulin/calnexin, conserved site (InterPro:IPR018124), Calreticulin (InterPro:IPR009169), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: calreticulin 1a (TAIR:AT1G56340.2). & (gnl|cdd|35893 : 414.0) no description available & (q40401|calr_nicpl : 411.0) Calreticulin precursor - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|84651 : 320.0) no description available & (reliability: 1062.0) & (original description: Putative crtA, Description = Calreticulin, PFAM = PF00262;PF00262)' T '30.3' 'signalling.calcium' 'niben101scf04411_409545-416288' '(gnl|cdd|71278 : 144.0) no description available & (at5g04020 : 109.0) calmodulin binding; FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Calmodulin-binding protein, plant (InterPro:IPR012417); BEST Arabidopsis thaliana protein match is: Plant calmodulin-binding protein-related (TAIR:AT2G38800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative Zm.64915, Description = Calcium/calmodulin protein kinase, PFAM = PF07839;PF07839)' T '30.3' 'signalling.calcium' 'niben101scf04431_156408-168272' '(at3g22190 : 195.0) IQ-domain 5 (IQD5); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 6 (TAIR:AT2G26180.1). & (reliability: 390.0) & (original description: Putative IQD5, Description = Protein IQ-domain 5, PFAM = PF00612)' T '30.3' 'signalling.calcium' 'niben101scf04556_174206-176622' '(at2g44310 : 171.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT1G54530.1); Has 278 Blast hits to 269 proteins in 34 species: Archae - 0; Bacteria - 3; Metazoa - 2; Fungi - 2; Plants - 243; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative At2g44310, Description = Calcium-binding EF-hand-containing protein, PFAM = PF13499)' T '30.3' 'signalling.calcium' 'niben101scf04640_303774-316469' '(at2g43040 : 957.0) encodes a calmodulin-binding protein that is expressed specifically in pollen and is required for pollen development.; no pollen germination 1 (NPG1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: no pollen germination related 2 (TAIR:AT4G28600.1); Has 573 Blast hits to 561 proteins in 155 species: Archae - 29; Bacteria - 89; Metazoa - 223; Fungi - 37; Plants - 141; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|39364 : 570.0) no description available & (reliability: 1914.0) & (original description: Putative NPG, Description = At2g43040, PFAM = PF13432;PF13176)' T '30.3' 'signalling.calcium' 'niben101scf04679_36410-45168' '(at1g05500 : 796.0) Encodes a endomembrane-localized synaptotagmin. Synaptotagmin family proteins are calcium sensors that regulate exocytosis in mammalian cells.; NTMC2T2.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT5G11100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34643 : 140.0) no description available & (gnl|cdd|36246 : 106.0) no description available & (reliability: 1566.0) & (original description: Putative SYT4, Description = Synaptotagmin-4, PFAM = PF00168;PF00168;PF17047)' T '30.3' 'signalling.calcium' 'niben101scf04722_63485-73064' '(at3g51850 : 941.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 13 (CPK13); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 30 (TAIR:AT1G74740.1); Has 124889 Blast hits to 118841 proteins in 3848 species: Archae - 180; Bacteria - 14009; Metazoa - 46910; Fungi - 16716; Plants - 24454; Viruses - 407; Other Eukaryotes - 22213 (source: NCBI BLink). & (p53683|cdpk2_orysa : 548.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (gnl|cdd|35255 : 382.0) no description available & (gnl|cdd|29142 : 269.0) no description available & (reliability: 1882.0) & (original description: Putative CPK13, Description = Calcium-dependent protein kinase 13, PFAM = PF13499;PF13499;PF00069)' T '30.3' 'signalling.calcium' 'niben101scf04732_51387-59528' '(at5g12180 : 885.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 17 (CPK17); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of pollen tube growth, protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 34 (TAIR:AT5G19360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p53683|cdpk2_orysa : 688.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (gnl|cdd|35255 : 398.0) no description available & (gnl|cdd|29142 : 277.0) no description available & (reliability: 1770.0) & (original description: Putative CPK34, Description = Calcium-dependent protein kinase 34, PFAM = PF13499;PF13499;PF00069)' T '30.3' 'signalling.calcium' 'niben101scf04738_530472-538709' '(at5g04870 : 854.0) A calcium-dependent protein kinase that can phosphorylate phenylalanine ammonia lyase (PAL), a key enzyme in pathogen defense.; calcium dependent protein kinase 1 (CPK1); FUNCTIONS IN: protein binding, calmodulin-dependent protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: peroxisome, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calmodulin-domain protein kinase cdpk isoform 2 (TAIR:AT3G10660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p28583|cdpk_soybn : 673.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (gnl|cdd|35255 : 407.0) no description available & (gnl|cdd|29142 : 277.0) no description available & (reliability: 1708.0) & (original description: Putative CPK5, Description = Calcium-dependent protein kinase 5, PFAM = PF00069;PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf04782_239208-241459' '(q8vwy6|polc1_tobac : 141.0) Polcalcin Nic t 1 (Calcium-binding pollen allergen Nic t 1) - Nicotiana tabacum (Common tobacco) & (at3g03430 : 101.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: pollen calcium-binding protein 1 (TAIR:AT5G17480.1); Has 11605 Blast hits to 7790 proteins in 1100 species: Archae - 2; Bacteria - 49; Metazoa - 4145; Fungi - 2353; Plants - 3498; Viruses - 0; Other Eukaryotes - 1558 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative Nict1, Description = Polcalcin Nic t 1, PFAM = PF13499)' T '30.3' 'signalling.calcium' 'niben101scf04808_33654-53899' '(at5g57110 : 1457.0) Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane.; "autoinhibited Ca2+ -ATPase, isoform 8" (ACA8); FUNCTIONS IN: protein self-association, calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: autoinhibited Ca(2+)-ATPase 10 (TAIR:AT4G29900.1); Has 45517 Blast hits to 34552 proteins in 3221 species: Archae - 872; Bacteria - 31142; Metazoa - 4022; Fungi - 2709; Plants - 2112; Viruses - 3; Other Eukaryotes - 4657 (source: NCBI BLink). & (gnl|cdd|35425 : 1423.0) no description available & (q2qmx9|aca1_orysa : 860.0) Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) - Oryza sativa (Rice) & (gnl|cdd|30822 : 621.0) no description available & (reliability: 2906.0) & (original description: Putative ACA8, Description = Calcium-transporting ATPase 8, plasma membrane-type, PFAM = PF00689;PF00122;PF00690;PF00702;PF12515)' T '30.3' 'signalling.calcium' 'niben101scf04813_313395-316000' '(at1g24620 : 117.0) EF hand calcium-binding protein family; FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to cold; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G18210.2); Has 28159 Blast hits to 18576 proteins in 1591 species: Archae - 2; Bacteria - 225; Metazoa - 10723; Fungi - 6999; Plants - 5954; Viruses - 2; Other Eukaryotes - 4254 (source: NCBI BLink). & (gnl|cdd|35250 : 112.0) no description available & (p04352|calm_chlre : 95.1) Calmodulin (CaM) - Chlamydomonas reinhardtii & (gnl|cdd|34727 : 86.4) no description available & (reliability: 234.0) & (original description: Putative CML10, Description = Probable calcium-binding protein CML10, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf04847_310244-315194' '(at4g26570 : 323.0) member of AtCBLs (Calcineurin B-like Calcium Sensor Proteins); calcineurin B-like 3 (CBL3); FUNCTIONS IN: calcium ion binding; INVOLVED IN: detection of calcium ion; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like protein 2 (TAIR:AT5G55990.1); Has 7988 Blast hits to 7953 proteins in 833 species: Archae - 0; Bacteria - 10; Metazoa - 3891; Fungi - 1253; Plants - 1902; Viruses - 0; Other Eukaryotes - 932 (source: NCBI BLink). & (gnl|cdd|35257 : 167.0) no description available & (reliability: 646.0) & (original description: Putative cBL9, Description = Calcineurin B-like protein 1, PFAM = PF13833;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf04864_398180-404313' '(at3g56760 : 597.0) Protein kinase superfamily protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CDPK-related kinase 1 (TAIR:AT2G41140.1); Has 115971 Blast hits to 114244 proteins in 3013 species: Archae - 152; Bacteria - 14469; Metazoa - 43130; Fungi - 12702; Plants - 24192; Viruses - 490; Other Eukaryotes - 20836 (source: NCBI BLink). & (p53681|crk_dauca : 518.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 333.0) no description available & (gnl|cdd|29142 : 262.0) no description available & (reliability: 1194.0) & (original description: Putative crk2, Description = CDPK-related protein kinase, PFAM = PF00069)' T '30.3' 'signalling.calcium' 'niben101scf04864_401795-405525' '(at2g41140 : 362.0) Encodes CDPK-related kinase 1 (CRK1).; CDPK-related kinase 1 (CRK1); FUNCTIONS IN: calcium-dependent protein serine/threonine phosphatase activity, calmodulin-dependent protein kinase activity, kinase activity, calcium ion binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G56760.1); Has 116311 Blast hits to 114570 proteins in 3026 species: Archae - 154; Bacteria - 14640; Metazoa - 43033; Fungi - 12673; Plants - 24419; Viruses - 507; Other Eukaryotes - 20885 (source: NCBI BLink). & (p53681|crk_dauca : 300.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 130.0) no description available & (gnl|cdd|29142 : 87.2) no description available & (reliability: 692.0) & (original description: Putative crk2, Description = CDPK-related protein kinase, PFAM = PF00069)' T '30.3' 'signalling.calcium' 'niben101scf04918_11531-21156' '(at1g05500 : 828.0) Encodes a endomembrane-localized synaptotagmin. Synaptotagmin family proteins are calcium sensors that regulate exocytosis in mammalian cells.; NTMC2T2.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT5G11100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34643 : 139.0) no description available & (gnl|cdd|36246 : 106.0) no description available & (reliability: 1566.0) & (original description: Putative SYT5, Description = Synaptotagmin-5, PFAM = PF00168;PF00168;PF17047)' T '30.3' 'signalling.calcium' 'niben101scf04918_11797-19233' '(at1g05500 : 657.0) Encodes a endomembrane-localized synaptotagmin. Synaptotagmin family proteins are calcium sensors that regulate exocytosis in mammalian cells.; NTMC2T2.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT5G11100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34643 : 113.0) no description available & (gnl|cdd|36246 : 102.0) no description available & (reliability: 1272.0) & (original description: Putative SYT4, Description = Extended synaptotagmin-3, PFAM = PF00168;PF00168;PF17047)' T '30.3' 'signalling.calcium' 'niben101scf04953_1270202-1274981' '(at5g03040 : 266.0) IQ-domain 2 (iqd2); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 1 (TAIR:AT3G09710.1). & (reliability: 532.0) & (original description: Putative iqd2, Description = Protein IQ-DOMAIN 1, PFAM = PF13178;PF00612)' T '30.3' 'signalling.calcium' 'niben101scf04954_517434-523964' '(at5g04220 : 612.0) SYTC; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: synaptotagmin A (TAIR:AT2G20990.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34643 : 157.0) no description available & (gnl|cdd|36246 : 93.3) no description available & (reliability: 1224.0) & (original description: Putative SYT3, Description = Synaptotagmin-3, PFAM = PF17047;PF00168;PF00168)' T '30.3' 'signalling.calcium' 'niben101scf05011_68961-75125' '(at3g52870 : 459.0) IQ calmodulin-binding motif family protein; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT3G58480.1); Has 341 Blast hits to 277 proteins in 58 species: Archae - 0; Bacteria - 26; Metazoa - 0; Fungi - 100; Plants - 209; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 918.0) & (original description: Putative IQM1, Description = Calmodulin-binding family protein, PFAM = )' T '30.3' 'signalling.calcium' 'niben101scf05029_278781-281257' '(at1g21550 : 105.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin like 42 (TAIR:AT4G20780.1); Has 8971 Blast hits to 8616 proteins in 1133 species: Archae - 0; Bacteria - 20; Metazoa - 2955; Fungi - 1509; Plants - 3114; Viruses - 0; Other Eukaryotes - 1373 (source: NCBI BLink). & (gnl|cdd|35250 : 81.6) no description available & (reliability: 210.0) & (original description: Putative CML44, Description = Calcium-binding family protein, PFAM = PF13202;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf05029_306747-309196' '(at1g21550 : 107.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin like 42 (TAIR:AT4G20780.1); Has 8971 Blast hits to 8616 proteins in 1133 species: Archae - 0; Bacteria - 20; Metazoa - 2955; Fungi - 1509; Plants - 3114; Viruses - 0; Other Eukaryotes - 1373 (source: NCBI BLink). & (gnl|cdd|35250 : 87.4) no description available & (reliability: 214.0) & (original description: Putative CML44, Description = Probable calcium-binding protein CML44, PFAM = PF13499;PF00036)' T '30.3' 'signalling.calcium' 'niben101scf05043_198530-203439' '(at1g27460 : 803.0) encodes a calmodulin-binding protein that is expressed in pollen, suspension culture cells, flowers, and fruits.; no pollen germination related 1 (NPGR1); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT2G43040.1); Has 2043 Blast hits to 1708 proteins in 322 species: Archae - 185; Bacteria - 626; Metazoa - 573; Fungi - 23; Plants - 162; Viruses - 0; Other Eukaryotes - 474 (source: NCBI BLink). & (gnl|cdd|39364 : 511.0) no description available & (reliability: 1606.0) & (original description: Putative Sb01g043840, Description = Putative uncharacterized protein Sb01g043840, PFAM = )' T '30.3' 'signalling.calcium' 'niben101scf05061_36768-46345' '(at5g57580 : 676.0) Calmodulin-binding protein; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT4G25800.2); Has 341 Blast hits to 322 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 339; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|71325 : 468.0) no description available & (reliability: 1352.0) & (original description: Putative CBP60B, Description = Calmodulin-binding protein 60 B, PFAM = PF07887)' T '30.3' 'signalling.calcium' 'niben101scf05078_618545-621024' '(at3g25600 : 197.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family (TAIR:AT1G18530.1); Has 23107 Blast hits to 15210 proteins in 1505 species: Archae - 1; Bacteria - 136; Metazoa - 8522; Fungi - 5826; Plants - 5264; Viruses - 0; Other Eukaryotes - 3358 (source: NCBI BLink). & (gnl|cdd|35250 : 123.0) no description available & (gnl|cdd|34727 : 88.4) no description available & (p27164|calm3_pethy : 87.4) Calmodulin-related protein - Petunia hybrida (Petunia) & (reliability: 394.0) & (original description: Putative CML16, Description = Probable calcium-binding protein CML16, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf05339_30999-46438' '(at2g45670 : 717.0) calcineurin B subunit-related; FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); Has 326 Blast hits to 325 proteins in 88 species: Archae - 0; Bacteria - 9; Metazoa - 188; Fungi - 2; Plants - 96; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|39865 : 115.0) no description available & (gnl|cdd|30553 : 80.0) no description available & (reliability: 1434.0) & (original description: Putative LPEAT2, Description = Lysophospholipid acyltransferase LPEAT2, PFAM = PF13833;PF01553)' T '30.3' 'signalling.calcium' 'niben101scf05363_14335-17306' '(at2g15760 : 89.4) Protein of unknown function (DUF1645); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT2G26530.2); Has 171 Blast hits to 167 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative PGSC0003DMG400007993, Description = DUF1645 family protein, PFAM = PF07816)' T '30.3' 'signalling.calcium' 'niben101scf05369_179716-188535' '(at1g14380 : 228.0) IQ-domain 28 (IQD28); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 29 (TAIR:AT2G02790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative IQD28, Description = At1g14380, PFAM = PF00612;PF00612;PF00612;PF13178)' T '30.3' 'signalling.calcium' 'niben101scf05407_60-2515' '(at3g07490 : 192.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ARF-GAP domain 11 (AGD11); FUNCTIONS IN: calcium ion binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Parvalbumin (InterPro:IPR008080), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT2G43290.1); Has 25143 Blast hits to 16842 proteins in 1503 species: Archae - 3; Bacteria - 170; Metazoa - 10890; Fungi - 4135; Plants - 6085; Viruses - 0; Other Eukaryotes - 3860 (source: NCBI BLink). & (gnl|cdd|35250 : 120.0) no description available & (gnl|cdd|34727 : 94.5) no description available & (p04352|calm_chlre : 81.6) Calmodulin (CaM) - Chlamydomonas reinhardtii & (reliability: 384.0) & (original description: Putative CML3, Description = Calmodulin-like protein 3, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf05483_28131-35042' '(at1g64850 : 242.0) Calcium-binding EF hand family protein; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37445.1); Has 71 Blast hits to 71 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 484.0) & (original description: Putative Sb06g027480, Description = Putative uncharacterized protein Sb06g027480, PFAM = )' T '30.3' 'signalling.calcium' 'niben101scf05516_395279-402711' '(at4g28600 : 661.0) encodes a calmodulin-binding protein that is expressed in pollen, suspension culture cells, flowers, and fruits.; no pollen germination related 2 (NPGR2); FUNCTIONS IN: calmodulin binding; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT2G43040.1); Has 2060 Blast hits to 1763 proteins in 357 species: Archae - 278; Bacteria - 547; Metazoa - 329; Fungi - 78; Plants - 247; Viruses - 0; Other Eukaryotes - 581 (source: NCBI BLink). & (gnl|cdd|39364 : 484.0) no description available & (reliability: 1322.0) & (original description: Putative NPG, Description = At2g43040, PFAM = PF13432;PF13181)' T '30.3' 'signalling.calcium' 'niben101scf05562_39168-43957' '(at4g17615 : 318.0) Member of AtCBL (Calcineurin B-like Calcium Sensor Proteins) family. Protein level is increased upon high salt, mannitol, and cold stresses. CBL1 interacts with CIPK23 and recruits the kinase to the plasma membrane where the substrate(s) of CIPK23 may reside. CBL1 localization is regulated by protein modification including myristolation and acylation.; calcineurin B-like protein 1 (CBL1); FUNCTIONS IN: calcium ion binding; INVOLVED IN: in 8 processes; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like protein 9 (TAIR:AT5G47100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35257 : 158.0) no description available & (reliability: 636.0) & (original description: Putative CBL6, Description = Calcineurin B-like protein 6, PFAM = PF13833;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf05565_216152-221534' '(at2g27030 : 233.0) encodes a calmodulin that has higher affinity to kinesin-like calmodulin binding motor protein than CAM4 or CAM6.; calmodulin 5 (CAM5); FUNCTIONS IN: calcium ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 3 (TAIR:AT3G56800.1); Has 36011 Blast hits to 23475 proteins in 1766 species: Archae - 4; Bacteria - 234; Metazoa - 15635; Fungi - 7487; Plants - 7311; Viruses - 0; Other Eukaryotes - 5340 (source: NCBI BLink). & (p27164|calm3_pethy : 232.0) Calmodulin-related protein - Petunia hybrida (Petunia) & (gnl|cdd|34727 : 155.0) no description available & (gnl|cdd|35250 : 153.0) no description available & (reliability: 466.0) & (original description: Putative PCM1, Description = Calmodulin-1, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf05588_458756-461358' '(at1g76650 : 133.0) calmodulin-like 38 (CML38); CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G76640.1). & (gnl|cdd|35250 : 95.9) no description available & (reliability: 266.0) & (original description: Putative CML25, Description = Probable calcium-binding protein CML25/26, PFAM = PF13499;PF13833)' T '30.3' 'signalling.calcium' 'niben101scf05675_13112-20120' '(at5g28830 : 288.0) calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT4G38810.2); Has 259 Blast hits to 210 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 576.0) & (original description: Putative BnaC09g02790D, Description = BnaC09g02790D protein, PFAM = )' T '30.3' 'signalling.calcium' 'niben101scf05692_803905-811064' '(at3g20290 : 908.0) Encodes AtEHD1, one of the Arabidopsis Eps15 homology domain proteins involved in endocytosis (AtEHD2, At4g05520).; EPS15 homology domain 1 (EHD1); FUNCTIONS IN: GTP binding, GTPase activity, calcium ion binding; INVOLVED IN: endocytosis; LOCATED IN: endosome, microsome, membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EPS15 homology (EH) (InterPro:IPR000261), Dynamin, GTPase domain (InterPro:IPR001401), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: EPS15 homology domain 2 (TAIR:AT4G05520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37165 : 604.0) no description available & (gnl|cdd|84713 : 99.0) no description available & (reliability: 1816.0) & (original description: Putative EHD1, Description = EH domain-containing protein 1, PFAM = PF16880;PF00350;PF12763)' T '30.3' 'signalling.calcium' 'niben101scf05805_269528-277123' '(at2g17890 : 793.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 16 (CPK16); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 18 (TAIR:AT4G36070.1); Has 126765 Blast hits to 124478 proteins in 3942 species: Archae - 195; Bacteria - 14619; Metazoa - 47448; Fungi - 14527; Plants - 27603; Viruses - 509; Other Eukaryotes - 21864 (source: NCBI BLink). & (p53681|crk_dauca : 431.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 370.0) no description available & (gnl|cdd|47550 : 272.0) no description available & (reliability: 1572.0) & (original description: Putative CPK16, Description = Calcium-dependent protein kinase 16, PFAM = PF00069;PF13499;PF13202)' T '30.3' 'signalling.calcium' 'niben101scf05813_298330-300412' '(at2g15680 : 144.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family (TAIR:AT5G37770.1); Has 22221 Blast hits to 15732 proteins in 1476 species: Archae - 2; Bacteria - 203; Metazoa - 8340; Fungi - 5009; Plants - 5639; Viruses - 0; Other Eukaryotes - 3028 (source: NCBI BLink). & (gnl|cdd|35250 : 111.0) no description available & (gnl|cdd|34727 : 83.4) no description available & (p04352|calm_chlre : 81.6) Calmodulin (CaM) - Chlamydomonas reinhardtii & (reliability: 288.0) & (original description: Putative CML1, Description = Calmodulin-like protein 1, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf05860_25313-30484' '(gnl|cdd|35425 : 503.0) no description available & (at3g63380 : 398.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: calcium ion transport, cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT3G22910.1); Has 46574 Blast hits to 34715 proteins in 3214 species: Archae - 909; Bacteria - 32032; Metazoa - 4086; Fungi - 2666; Plants - 2162; Viruses - 3; Other Eukaryotes - 4716 (source: NCBI BLink). & (gnl|cdd|30822 : 266.0) no description available & (q6atv4|aca2_orysa : 232.0) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (reliability: 796.0) & (original description: Putative , Description = , PFAM = PF00122;PF00689)' T '30.3' 'signalling.calcium' 'niben101scf05862_98725-115720' '(at4g27280 : 134.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to karrikin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: pinoid-binding protein 1 (TAIR:AT5G54490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative PBP1, Description = Calcium-binding protein PBP1, PFAM = PF13833)' T '30.3' 'signalling.calcium' 'niben101scf06077_156250-175099' '(at1g21630 : 675.0) Calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EPS15 homology (EH) (InterPro:IPR000261), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT1G20760.1). & (gnl|cdd|36216 : 136.0) no description available & (gnl|cdd|47376 : 90.7) no description available & (reliability: 1350.0) & (original description: Putative BnaA07g10930D, Description = BnaA07g10930D protein, PFAM = PF12763;PF13202)' T '30.3' 'signalling.calcium' 'niben101scf06093_53110-59578' '(at5g12480 : 860.0) calmodulin-domain protein kinase CDPK isoform 7 (CPK7); calmodulin-domain protein kinase 7 (CPK7); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 19 (TAIR:AT5G19450.2); Has 104543 Blast hits to 101042 proteins in 3590 species: Archae - 138; Bacteria - 12396; Metazoa - 40131; Fungi - 14132; Plants - 17107; Viruses - 370; Other Eukaryotes - 20269 (source: NCBI BLink). & (p53683|cdpk2_orysa : 537.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (gnl|cdd|35255 : 399.0) no description available & (gnl|cdd|47550 : 279.0) no description available & (reliability: 1720.0) & (original description: Putative CPK7, Description = Calcium-dependent protein kinase 7, PFAM = PF00069;PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf06155_45776-53484' '(at5g03040 : 166.0) IQ-domain 2 (iqd2); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 1 (TAIR:AT3G09710.1). & (reliability: 332.0) & (original description: Putative LOC100274440, Description = IQD1, PFAM = PF00612)' T '30.3' 'signalling.calcium' 'niben101scf06172_127639-134674' '(at1g74690 : 228.0) IQ-domain 31 (IQD31); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 30 (TAIR:AT1G18840.2); Has 8498 Blast hits to 6418 proteins in 674 species: Archae - 21; Bacteria - 823; Metazoa - 3400; Fungi - 838; Plants - 1044; Viruses - 44; Other Eukaryotes - 2328 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative IQD31, Description = Protein IQ-DOMAIN 31, PFAM = PF13178;PF00612;PF00612)' T '30.3' 'signalling.calcium' 'niben101scf06184_176036-187176' '(at2g46700 : 828.0) CDPK-related kinase 3 (CRK3); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Calcium-dependent protein kinase (CDPK) family protein (TAIR:AT5G24430.1); Has 97610 Blast hits to 96449 proteins in 2853 species: Archae - 105; Bacteria - 12972; Metazoa - 36079; Fungi - 11803; Plants - 17625; Viruses - 411; Other Eukaryotes - 18615 (source: NCBI BLink). & (p53681|crk_dauca : 670.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 355.0) no description available & (gnl|cdd|29142 : 270.0) no description available & (reliability: 1656.0) & (original description: Putative CRK3, Description = CDPK-related kinase 3, PFAM = PF00069)' T '30.3' 'signalling.calcium' 'niben101scf06222_119205-127471' '(at5g57580 : 734.0) Calmodulin-binding protein; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT4G25800.2); Has 341 Blast hits to 322 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 339; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|71325 : 486.0) no description available & (reliability: 1468.0) & (original description: Putative TCB60, Description = Calmodulin-binding protein, PFAM = PF07887)' T '30.3' 'signalling.calcium' 'niben101scf06408_105599-117117' '(at3g51850 : 924.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 13 (CPK13); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 30 (TAIR:AT1G74740.1); Has 124889 Blast hits to 118841 proteins in 3848 species: Archae - 180; Bacteria - 14009; Metazoa - 46910; Fungi - 16716; Plants - 24454; Viruses - 407; Other Eukaryotes - 22213 (source: NCBI BLink). & (p28583|cdpk_soybn : 533.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (gnl|cdd|35255 : 376.0) no description available & (gnl|cdd|29142 : 263.0) no description available & (reliability: 1848.0) & (original description: Putative cdpk3, Description = Calcium-dependent protein kinase, PFAM = PF13499;PF13499;PF00069)' T '30.3' 'signalling.calcium' 'niben101scf06467_462761-472519' '(at1g27770 : 1616.0) Encodes a chloroplast envelope Ca2+-ATPase with an N-terminal autoinhibitor.; autoinhibited Ca2+-ATPase 1 (ACA1); FUNCTIONS IN: calcium channel activity, calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: cation transport, calcium ion transport, ATP biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, chloroplast inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type cation exchange, alpha subunit (InterPro:IPR006069), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: calcium ATPase 2 (TAIR:AT4G37640.1); Has 48793 Blast hits to 33205 proteins in 3149 species: Archae - 856; Bacteria - 30326; Metazoa - 5666; Fungi - 3781; Plants - 2732; Viruses - 4; Other Eukaryotes - 5428 (source: NCBI BLink). & (q2qmx9|aca1_orysa : 1584.0) Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) - Oryza sativa (Rice) & (gnl|cdd|35425 : 1416.0) no description available & (gnl|cdd|30822 : 577.0) no description available & (reliability: 3184.0) & (original description: Putative ACA1, Description = Calcium-transporting ATPase 1, chloroplastic, PFAM = PF13246;PF00690;PF00689;PF12515;PF00122;PF00702)' T '30.3' 'signalling.calcium' 'niben101scf06509_143746-148264' '(at3g16490 : 159.0) IQ-domain 26 (IQD26); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 27 (TAIR:AT1G51960.1); Has 778 Blast hits to 763 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 10; Plants - 755; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative IQD3, Description = Calmodulin-binding family protein, PFAM = PF13178;PF00612;PF00612)' T '30.3' 'signalling.calcium' 'niben101scf06578_63075-65411' '(at4g27280 : 95.1) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to karrikin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: pinoid-binding protein 1 (TAIR:AT5G54490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative ccd1, Description = Calcium-binding EF-hand protein, PFAM = PF13833)' T '30.3' 'signalling.calcium' 'niben101scf06621_368644-378829' '(at5g61900 : 778.0) Encodes a plasma-membrane localized, copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Mutants exhibit temperature-sensitive growth defects and increased hypersensitive response where permissive conditions are low temperature (22 degrees Celsius) and low humidity. Gene is expressed at 22 but not at 28 (restrictive condition) degrees. Lethality of double mutants with BON3 can be partially suppressed by SNC1. Double mutants show defects in development that are genetically separable from hypersensitive/cell death response.; BONZAI 1 (BON1); FUNCTIONS IN: calcium-dependent phospholipid binding; INVOLVED IN: in 7 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36541 : 509.0) no description available & (gnl|cdd|29232 : 314.0) no description available & (reliability: 1556.0) & (original description: Putative BON1, Description = Protein BONZAI 1, PFAM = PF07002;PF00168;PF00168)' T '30.3' 'signalling.calcium' 'niben101scf06639_121493-125622' '(at5g24270 : 308.0) encodes a calcium sensor that is essential for K+ nutrition, K+/Na+ selectivity, and salt tolerance. The protein is similar to calcineurin B. Lines carrying recessive mutations are hypersensitive to Na+ and Li+ stresses and is unable to grow in low K+. The growth defect is rescued by extracellular calcium.; SALT OVERLY SENSITIVE 3 (SOS3); CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like protein 8 (TAIR:AT1G64480.1). & (gnl|cdd|35257 : 172.0) no description available & (reliability: 616.0) & (original description: Putative cbl, Description = Calcineurin B-like molecule, PFAM = PF13499;PF13833)' T '30.3' 'signalling.calcium' 'niben101scf06996_389312-395498' '(gnl|cdd|71325 : 334.0) no description available & (at4g25800 : 309.0) Calmodulin-binding protein; FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT5G57580.1); Has 340 Blast hits to 325 proteins in 25 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 333; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 618.0) & (original description: Putative TCB60, Description = Calmodulin-binding protein 60-C, PFAM = PF07887)' T '30.3' 'signalling.calcium' 'niben101scf07015_96611-108595' '(at5g28850 : 561.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G28900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37773 : 410.0) no description available & (reliability: 1122.0) & (original description: Putative P2R3B, Description = Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha, PFAM = PF13499)' T '30.3' 'signalling.calcium' 'niben101scf07019_100008-106677' '(at2g17890 : 769.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 16 (CPK16); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 18 (TAIR:AT4G36070.1); Has 126765 Blast hits to 124478 proteins in 3942 species: Archae - 195; Bacteria - 14619; Metazoa - 47448; Fungi - 14527; Plants - 27603; Viruses - 509; Other Eukaryotes - 21864 (source: NCBI BLink). & (p53681|crk_dauca : 442.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 370.0) no description available & (gnl|cdd|47550 : 263.0) no description available & (reliability: 1534.0) & (original description: Putative CPK16, Description = Calcium-dependent protein kinase 16, PFAM = PF00069;PF13833;PF13202)' T '30.3' 'signalling.calcium' 'niben101scf07027_696397-720956' '(at1g21630 : 697.0) Calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EPS15 homology (EH) (InterPro:IPR000261), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT1G20760.1). & (gnl|cdd|36216 : 149.0) no description available & (gnl|cdd|47376 : 93.8) no description available & (reliability: 1394.0) & (original description: Putative Os06g0728600, Description = Os06g0728600 protein, PFAM = PF13202;PF12763)' T '30.3' 'signalling.calcium' 'niben101scf07123_66315-70554' '(at2g27030 : 275.0) encodes a calmodulin that has higher affinity to kinesin-like calmodulin binding motor protein than CAM4 or CAM6.; calmodulin 5 (CAM5); FUNCTIONS IN: calcium ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 3 (TAIR:AT3G56800.1); Has 36011 Blast hits to 23475 proteins in 1766 species: Archae - 4; Bacteria - 234; Metazoa - 15635; Fungi - 7487; Plants - 7311; Viruses - 0; Other Eukaryotes - 5340 (source: NCBI BLink). & (p27164|calm3_pethy : 272.0) Calmodulin-related protein - Petunia hybrida (Petunia) & (gnl|cdd|35250 : 172.0) no description available & (gnl|cdd|34727 : 167.0) no description available & (reliability: 550.0) & (original description: Putative calA, Description = Calmodulin, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf07303_234562-236927' '(at4g27280 : 116.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to karrikin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: pinoid-binding protein 1 (TAIR:AT5G54490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative KRP1, Description = AT4g27280/M4I22_90, PFAM = PF13833)' T '30.3' 'signalling.calcium' 'niben101scf07339_263761-282008' '(at3g51380 : 87.0) IQ-domain 20 (IQD20); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 21 (TAIR:AT3G49260.3); Has 730 Blast hits to 729 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 3; Plants - 702; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative IQD3, Description = IQ-domain 21, putative isoform 1, PFAM = PF00612)' T '30.3' 'signalling.calcium' 'niben101scf07383_1235133-1237582' '(at3g07490 : 194.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ARF-GAP domain 11 (AGD11); FUNCTIONS IN: calcium ion binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Parvalbumin (InterPro:IPR008080), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT2G43290.1); Has 25143 Blast hits to 16842 proteins in 1503 species: Archae - 3; Bacteria - 170; Metazoa - 10890; Fungi - 4135; Plants - 6085; Viruses - 0; Other Eukaryotes - 3860 (source: NCBI BLink). & (gnl|cdd|35250 : 115.0) no description available & (p04352|calm_chlre : 94.0) Calmodulin (CaM) - Chlamydomonas reinhardtii & (gnl|cdd|34727 : 92.2) no description available & (reliability: 388.0) & (original description: Putative cbp1, Description = Calmodulin-like protein 7, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf07391_301386-310077' '(at4g23060 : 159.0) IQ-domain 22 (IQD22); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 26 (TAIR:AT3G16490.1); Has 890 Blast hits to 763 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 3; Plants - 728; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative IQD22, Description = Calmodulin binding protein IQD22, PFAM = PF13178;PF00612;PF00612)' T '30.3' 'signalling.calcium' 'niben101scf07451_660-3157' '(at1g18210 : 157.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family (TAIR:AT1G73630.1); Has 26408 Blast hits to 16156 proteins in 1551 species: Archae - 2; Bacteria - 177; Metazoa - 9876; Fungi - 6429; Plants - 6014; Viruses - 0; Other Eukaryotes - 3910 (source: NCBI BLink). & (gnl|cdd|35250 : 122.0) no description available & (p04352|calm_chlre : 92.0) Calmodulin (CaM) - Chlamydomonas reinhardtii & (gnl|cdd|34727 : 89.9) no description available & (reliability: 314.0) & (original description: Putative cbl1, Description = Calmodulin 24-like protein, PFAM = PF13499;PF13833)' T '30.3' 'signalling.calcium' 'niben101scf07459_106217-114703' '(at3g61050 : 610.0) NTMC2T4; FUNCTIONS IN: lipid binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: male gametophyte, cultured cell, callus, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G61030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34643 : 143.0) no description available & (reliability: 1220.0) & (original description: Putative BnaA07g18880D, Description = BnaA07g18880D protein, PFAM = PF17047;PF00168)' T '30.3' 'signalling.calcium' 'niben101scf07532_315641-318078' '(at1g12310 : 247.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, nucleus, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G62820.1); Has 15156 Blast hits to 13043 proteins in 1439 species: Archae - 0; Bacteria - 35; Metazoa - 6065; Fungi - 3861; Plants - 3197; Viruses - 0; Other Eukaryotes - 1998 (source: NCBI BLink). & (p27164|calm3_pethy : 134.0) Calmodulin-related protein - Petunia hybrida (Petunia) & (gnl|cdd|35250 : 117.0) no description available & (gnl|cdd|34727 : 108.0) no description available & (reliability: 490.0) & (original description: Putative CML13, Description = Probable calcium-binding protein CML13, PFAM = PF13405;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf07532_379160-386588' '(p27164|calm3_pethy : 272.0) Calmodulin-related protein - Petunia hybrida (Petunia) & (at2g27030 : 258.0) encodes a calmodulin that has higher affinity to kinesin-like calmodulin binding motor protein than CAM4 or CAM6.; calmodulin 5 (CAM5); FUNCTIONS IN: calcium ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 3 (TAIR:AT3G56800.1); Has 36011 Blast hits to 23475 proteins in 1766 species: Archae - 4; Bacteria - 234; Metazoa - 15635; Fungi - 7487; Plants - 7311; Viruses - 0; Other Eukaryotes - 5340 (source: NCBI BLink). & (gnl|cdd|35250 : 165.0) no description available & (gnl|cdd|34727 : 159.0) no description available & (reliability: 516.0) & (original description: Putative CAM53, Description = Calmodulin-related protein, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf07586_80163-82768' '(q09011|cast_soltu : 230.0) Calcium-binding protein CAST - Solanum tuberosum (Potato) & (at4g20780 : 170.0) Calcium sensor involved in trichome branching.; calmodulin like 42 (CML42); FUNCTIONS IN: calcium ion binding; INVOLVED IN: trichome branching; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin like 43 (TAIR:AT5G44460.1); Has 15351 Blast hits to 11255 proteins in 1265 species: Archae - 0; Bacteria - 33; Metazoa - 5903; Fungi - 3155; Plants - 4145; Viruses - 2; Other Eukaryotes - 2113 (source: NCBI BLink). & (gnl|cdd|35250 : 96.6) no description available & (reliability: 340.0) & (original description: Putative CML24, Description = Calcium-binding protein CML42, PFAM = PF13499;PF13202)' T '30.3' 'signalling.calcium' 'niben101scf07608_33278-36410' '(at2g27030 : 170.0) encodes a calmodulin that has higher affinity to kinesin-like calmodulin binding motor protein than CAM4 or CAM6.; calmodulin 5 (CAM5); FUNCTIONS IN: calcium ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 3 (TAIR:AT3G56800.1); Has 36011 Blast hits to 23475 proteins in 1766 species: Archae - 4; Bacteria - 234; Metazoa - 15635; Fungi - 7487; Plants - 7311; Viruses - 0; Other Eukaryotes - 5340 (source: NCBI BLink). & (p27164|calm3_pethy : 167.0) Calmodulin-related protein - Petunia hybrida (Petunia) & (gnl|cdd|35250 : 129.0) no description available & (gnl|cdd|34727 : 118.0) no description available & (reliability: 340.0) & (original description: Putative calA, Description = Calmodulin, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf07741_251419-270559' '(at3g21180 : 1483.0) one of the type IIB calcium pump isoforms. encodes an autoinhibited Ca(2+)-ATPase that contains an N-terminal calmodulin binding autoinhibitory domain.; autoinhibited Ca(2+)-ATPase 9 (ACA9); FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: single fertilization, pollen development; LOCATED IN: plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type cation exchange, alpha subunit (InterPro:IPR006069), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: autoinhibited Ca2+ -ATPase, isoform 8 (TAIR:AT5G57110.2); Has 46757 Blast hits to 34166 proteins in 3170 species: Archae - 936; Bacteria - 32145; Metazoa - 4117; Fungi - 2726; Plants - 2106; Viruses - 3; Other Eukaryotes - 4724 (source: NCBI BLink). & (gnl|cdd|35425 : 1368.0) no description available & (q2qmx9|aca1_orysa : 823.0) Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) - Oryza sativa (Rice) & (gnl|cdd|30822 : 588.0) no description available & (reliability: 2966.0) & (original description: Putative ACA9, Description = Calcium-transporting ATPase 9, plasma membrane-type, PFAM = PF12515;PF00122;PF00702;PF00690;PF00689)' T '30.3' 'signalling.calcium' 'niben101scf08000_46554-50284' '(at3g51380 : 80.1) IQ-domain 20 (IQD20); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 21 (TAIR:AT3G49260.3); Has 730 Blast hits to 729 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 3; Plants - 702; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative IQD13, Description = IQ-domain 21, putative isoform 1, PFAM = PF00612)' T '30.3' 'signalling.calcium' 'niben101scf08035_25350-27823' '(at5g37770 : 150.0) Encodes a protein with 40% similarity to calmodulin. Binds Ca(2+) and, as a consequence, undergoes conformational changes. CML24 expression occurs in all major organs, and transcript levels are increased from 2- to 15-fold in plants subjected to touch, darkness, heat, cold, hydrogen peroxide, abscisic acid (ABA), and indole-3-acetic acid. However, CML24 protein accumulation changes were not detectable. The putative CML24 regulatory region confers reporter expression at sites of predicted mechanical stress; in regions undergoing growth; in vascular tissues and various floral organs; and in stomata, trichomes, and hydathodes. CML24-underexpressing transgenics are resistant to ABA inhibition of germination and seedling growth, are defective in long-day induction of flowering, and have enhanced tolerance to CoCl(2), molybdic acid, ZnSO(4), and MgCl(2). Also regulates nitric oxide levels.; TOUCH 2 (TCH2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: in 13 processes; LOCATED IN: plasma membrane, actin cytoskeleton; EXPRESSED IN: 34 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin like 23 (TAIR:AT1G66400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35250 : 132.0) no description available & (p27164|calm3_pethy : 105.0) Calmodulin-related protein - Petunia hybrida (Petunia) & (gnl|cdd|34727 : 96.8) no description available & (reliability: 300.0) & (original description: Putative CML23, Description = Probable calcium-binding protein CML23, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf08078_312431-319473' '(at1g19870 : 185.0) IQ-domain 32 (iqd32); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 31 (TAIR:AT1G74690.1); Has 9103 Blast hits to 6594 proteins in 683 species: Archae - 22; Bacteria - 1108; Metazoa - 3792; Fungi - 1037; Plants - 1107; Viruses - 33; Other Eukaryotes - 2004 (source: NCBI BLink). & (reliability: 370.0) & (original description: Putative TCM_034188, Description = Iq-domain 32, putative isoform 3, PFAM = PF00612)' T '30.3' 'signalling.calcium' 'niben101scf08081_385431-402450' '(at3g61050 : 615.0) NTMC2T4; FUNCTIONS IN: lipid binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: male gametophyte, cultured cell, callus, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G61030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34643 : 145.0) no description available & (reliability: 1230.0) & (original description: Putative SYT4, Description = Extended synaptotagmin-3, PFAM = PF17047;PF00168)' T '30.3' 'signalling.calcium' 'niben101scf08097_303393-312399' '(p53683|cdpk2_orysa : 779.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (at4g04720 : 775.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 21 (CPK21); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 15 (TAIR:AT4G21940.1); Has 137194 Blast hits to 129287 proteins in 3977 species: Archae - 168; Bacteria - 14125; Metazoa - 50898; Fungi - 18038; Plants - 29874; Viruses - 499; Other Eukaryotes - 23592 (source: NCBI BLink). & (gnl|cdd|35255 : 407.0) no description available & (gnl|cdd|29142 : 272.0) no description available & (reliability: 1550.0) & (original description: Putative cpk1, Description = Calcium-dependent protein kinase, PFAM = PF00069;PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf08127_1240117-1242123' '(at3g25600 : 199.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family (TAIR:AT1G18530.1); Has 23107 Blast hits to 15210 proteins in 1505 species: Archae - 1; Bacteria - 136; Metazoa - 8522; Fungi - 5826; Plants - 5264; Viruses - 0; Other Eukaryotes - 3358 (source: NCBI BLink). & (gnl|cdd|35250 : 118.0) no description available & (p27164|calm3_pethy : 87.8) Calmodulin-related protein - Petunia hybrida (Petunia) & (gnl|cdd|34727 : 84.9) no description available & (reliability: 398.0) & (original description: Putative CML16, Description = Probable calcium-binding protein CML16, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf08206_274508-284190' '(at5g24430 : 713.0) Calcium-dependent protein kinase (CDPK) family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Calcium-dependent protein kinase (CDPK) family protein (TAIR:AT3G49370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p53681|crk_dauca : 642.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 357.0) no description available & (gnl|cdd|29142 : 275.0) no description available & (reliability: 1426.0) & (original description: Putative CRK4, Description = CDPK-related kinase 4, PFAM = PF00069)' T '30.3' 'signalling.calcium' 'niben101scf08357_184991-187560' '(at5g39670 : 97.4) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G29000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 194.8) & (original description: Putative CML30, Description = Putative calcium-binding protein CML45-like, PFAM = PF13499)' T '30.3' 'signalling.calcium' 'niben101scf08368_299737-308667' '(at1g24620 : 184.0) EF hand calcium-binding protein family; FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to cold; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G18210.2); Has 28159 Blast hits to 18576 proteins in 1591 species: Archae - 2; Bacteria - 225; Metazoa - 10723; Fungi - 6999; Plants - 5954; Viruses - 2; Other Eukaryotes - 4254 (source: NCBI BLink). & (gnl|cdd|35250 : 122.0) no description available & (q6f332|calm2_orysa : 113.0) Calmodulin-2 (CaM-2) - Oryza sativa (Rice) & (gnl|cdd|34727 : 96.8) no description available & (reliability: 368.0) & (original description: Putative CML10, Description = Probable calcium-binding protein CML10, PFAM = PF13499;PF13833)' T '30.3' 'signalling.calcium' 'niben101scf08470_350201-354008' '(at2g27030 : 201.0) encodes a calmodulin that has higher affinity to kinesin-like calmodulin binding motor protein than CAM4 or CAM6.; calmodulin 5 (CAM5); FUNCTIONS IN: calcium ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 3 (TAIR:AT3G56800.1); Has 36011 Blast hits to 23475 proteins in 1766 species: Archae - 4; Bacteria - 234; Metazoa - 15635; Fungi - 7487; Plants - 7311; Viruses - 0; Other Eukaryotes - 5340 (source: NCBI BLink). & (p27164|calm3_pethy : 197.0) Calmodulin-related protein - Petunia hybrida (Petunia) & (gnl|cdd|35250 : 144.0) no description available & (gnl|cdd|34727 : 139.0) no description available & (reliability: 402.0) & (original description: Putative CML8, Description = Calmodulin-like protein 8, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf08476_28574-34831' '(at3g59690 : 314.0) IQ-domain 13 (IQD13); FUNCTIONS IN: calmodulin binding; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 14 (TAIR:AT2G43680.1); Has 1694 Blast hits to 1201 proteins in 100 species: Archae - 0; Bacteria - 16; Metazoa - 93; Fungi - 40; Plants - 1224; Viruses - 44; Other Eukaryotes - 277 (source: NCBI BLink). & (reliability: 628.0) & (original description: Putative IQD13, Description = IQ-domain 3 isoform 2, PFAM = PF13178;PF00612)' T '30.3' 'signalling.calcium' 'niben101scf08680_203307-209333' '(at5g39380 : 108.0) Plant calmodulin-binding protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Calmodulin-binding protein, plant (InterPro:IPR012417); BEST Arabidopsis thaliana protein match is: Plant calmodulin-binding protein-related (TAIR:AT5G15430.1); Has 1562 Blast hits to 1366 proteins in 187 species: Archae - 0; Bacteria - 45; Metazoa - 751; Fungi - 101; Plants - 192; Viruses - 10; Other Eukaryotes - 463 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative At5g07820, Description = Os12g0506500 protein, PFAM = PF07839)' T '30.3' 'signalling.calcium' 'niben101scf08691_91242-100067' '(at5g04220 : 577.0) SYTC; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: synaptotagmin A (TAIR:AT2G20990.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34643 : 163.0) no description available & (gnl|cdd|36246 : 91.4) no description available & (reliability: 1154.0) & (original description: Putative SYT3, Description = Synaptotagmin-3, PFAM = PF17047;PF00168;PF00168)' T '30.3' 'signalling.calcium' 'niben101scf08716_112075-119270' '(at5g12180 : 865.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 17 (CPK17); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of pollen tube growth, protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 34 (TAIR:AT5G19360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p53683|cdpk2_orysa : 686.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (gnl|cdd|35255 : 396.0) no description available & (gnl|cdd|29142 : 274.0) no description available & (reliability: 1730.0) & (original description: Putative CPK34, Description = Calcium-dependent protein kinase 34, PFAM = PF13499;PF13499;PF00069)' T '30.3' 'signalling.calcium' 'niben101scf08820_245750-253199' '(at3g51850 : 911.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 13 (CPK13); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 30 (TAIR:AT1G74740.1); Has 124889 Blast hits to 118841 proteins in 3848 species: Archae - 180; Bacteria - 14009; Metazoa - 46910; Fungi - 16716; Plants - 24454; Viruses - 407; Other Eukaryotes - 22213 (source: NCBI BLink). & (p53683|cdpk2_orysa : 549.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (gnl|cdd|35255 : 374.0) no description available & (gnl|cdd|29142 : 263.0) no description available & (reliability: 1822.0) & (original description: Putative CPK13, Description = Calcium-dependent protein kinase 13, PFAM = PF13499;PF13499;PF00069)' T '30.3' 'signalling.calcium' 'niben101scf08918_218826-223134' '(at5g13460 : 185.0) IQ-domain 11 (IQD11); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 12 (TAIR:AT5G03960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 370.0) & (original description: Putative IQD11, Description = Iq-domain 14, putative isoform 1, PFAM = PF13178;PF00612)' T '30.3' 'signalling.calcium' 'niben101scf08926_172994-175599' '(q09011|cast_soltu : 231.0) Calcium-binding protein CAST - Solanum tuberosum (Potato) & (at4g20780 : 174.0) Calcium sensor involved in trichome branching.; calmodulin like 42 (CML42); FUNCTIONS IN: calcium ion binding; INVOLVED IN: trichome branching; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin like 43 (TAIR:AT5G44460.1); Has 15351 Blast hits to 11255 proteins in 1265 species: Archae - 0; Bacteria - 33; Metazoa - 5903; Fungi - 3155; Plants - 4145; Viruses - 2; Other Eukaryotes - 2113 (source: NCBI BLink). & (gnl|cdd|35250 : 96.3) no description available & (reliability: 348.0) & (original description: Putative CML42, Description = Calcium-binding protein CML42, PFAM = PF13499;PF13405)' T '30.3' 'signalling.calcium' 'niben101scf09112_363376-377814' '(gnl|cdd|83278 : 718.0) no description available & (gnl|cdd|35424 : 309.0) no description available & (q6atv4|aca2_orysa : 166.0) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (at5g57350 : 162.0) member of Plasma membrane H+-ATPase family; H(+)-ATPase 3 (HA3); FUNCTIONS IN: ATPase activity, hydrogen-exporting ATPase activity, phosphorylative mechanism; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 2 (TAIR:AT4G30190.1). & (reliability: 320.0) & (original description: Putative mgtA, Description = Magnesium-importing ATPase, PFAM = PF00122;PF00702;PF00690)' T '30.3' 'signalling.calcium' 'niben101scf09116_263749-272326' '(at4g28600 : 686.0) encodes a calmodulin-binding protein that is expressed in pollen, suspension culture cells, flowers, and fruits.; no pollen germination related 2 (NPGR2); FUNCTIONS IN: calmodulin binding; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT2G43040.1); Has 2060 Blast hits to 1763 proteins in 357 species: Archae - 278; Bacteria - 547; Metazoa - 329; Fungi - 78; Plants - 247; Viruses - 0; Other Eukaryotes - 581 (source: NCBI BLink). & (gnl|cdd|39364 : 514.0) no description available & (reliability: 1372.0) & (original description: Putative NPG, Description = At2g43040, PFAM = )' T '30.3' 'signalling.calcium' 'niben101scf09276_12129-16053' '(at3g16490 : 263.0) IQ-domain 26 (IQD26); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 27 (TAIR:AT1G51960.1); Has 778 Blast hits to 763 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 10; Plants - 755; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative IQD3, Description = Calmodulin-binding family protein, PFAM = PF13178;PF00612;PF00612)' T '30.3' 'signalling.calcium' 'niben101scf09296_122563-128256' '(at3g57530 : 839.0) Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitro; calcium-dependent protein kinase 32 (CPK32); FUNCTIONS IN: protein binding, calcium-dependent protein kinase C activity, calmodulin-dependent protein kinase activity, kinase activity; INVOLVED IN: response to salt stress, protein amino acid phosphorylation, N-terminal protein myristoylation, abscisic acid mediated signaling pathway; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 14 (TAIR:AT2G41860.1); Has 119294 Blast hits to 116101 proteins in 3724 species: Archae - 161; Bacteria - 14072; Metazoa - 45815; Fungi - 14807; Plants - 21931; Viruses - 443; Other Eukaryotes - 22065 (source: NCBI BLink). & (p28583|cdpk_soybn : 512.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (gnl|cdd|35255 : 397.0) no description available & (gnl|cdd|47550 : 285.0) no description available & (reliability: 1678.0) & (original description: Putative CPK32, Description = Calcium-dependent protein kinase 32, PFAM = PF13499;PF00069;PF13833)' T '30.3' 'signalling.calcium' 'niben101scf09310_104853-110854' '(at3g13460 : 562.0) Physically interacts with CIPK1.; evolutionarily conserved C-terminal region 2 (ECT2); FUNCTIONS IN: protein binding; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 4 (TAIR:AT1G55500.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37112 : 383.0) no description available & (gnl|cdd|67749 : 162.0) no description available & (reliability: 1124.0) & (original description: Putative ECT1, Description = AT3G03950 protein, PFAM = PF04146)' T '30.3' 'signalling.calcium' 'niben101scf09345_90762-98849' '(at2g17890 : 833.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 16 (CPK16); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 18 (TAIR:AT4G36070.1); Has 126765 Blast hits to 124478 proteins in 3942 species: Archae - 195; Bacteria - 14619; Metazoa - 47448; Fungi - 14527; Plants - 27603; Viruses - 509; Other Eukaryotes - 21864 (source: NCBI BLink). & (p53681|crk_dauca : 446.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (gnl|cdd|35255 : 371.0) no description available & (gnl|cdd|29142 : 263.0) no description available & (reliability: 1662.0) & (original description: Putative CPK16, Description = Calcium-dependent protein kinase 16, PFAM = PF00069;PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf09365_58766-67702' '(at1g74740 : 863.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 30 (CPK30); FUNCTIONS IN: calmodulin-dependent protein kinase activity, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation, abscisic acid mediated signaling pathway; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 1 (TAIR:AT1G18890.1); Has 129906 Blast hits to 123880 proteins in 3943 species: Archae - 178; Bacteria - 14335; Metazoa - 48347; Fungi - 17163; Plants - 26785; Viruses - 481; Other Eukaryotes - 22617 (source: NCBI BLink). & (p53683|cdpk2_orysa : 535.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (gnl|cdd|35255 : 390.0) no description available & (gnl|cdd|29142 : 266.0) no description available & (reliability: 1726.0) & (original description: Putative CPK30, Description = Calcium-dependent protein kinase 30, PFAM = PF00069;PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf09459_235300-239304' '(at3g24110 : 225.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT4G26470.1); Has 7639 Blast hits to 6370 proteins in 881 species: Archae - 1; Bacteria - 23; Metazoa - 3335; Fungi - 878; Plants - 2363; Viruses - 0; Other Eukaryotes - 1039 (source: NCBI BLink). & (gnl|cdd|35250 : 88.2) no description available & (reliability: 450.0) & (original description: Putative CML22, Description = Probable calcium-binding protein CML22, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf09554_77760-81292' '(at3g29310 : 94.0) calmodulin-binding protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 948 Blast hits to 846 proteins in 195 species: Archae - 0; Bacteria - 37; Metazoa - 375; Fungi - 99; Plants - 124; Viruses - 14; Other Eukaryotes - 299 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative BAG1, Description = Bcl-2-associated athanogene 8, PFAM = )' T '30.3' 'signalling.calcium' 'niben101scf09554_78175-81297' '(at3g29310 : 93.6) calmodulin-binding protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 948 Blast hits to 846 proteins in 195 species: Archae - 0; Bacteria - 37; Metazoa - 375; Fungi - 99; Plants - 124; Viruses - 14; Other Eukaryotes - 299 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative)' T '30.3' 'signalling.calcium' 'niben101scf09554_231653-235839' '(at5g39380 : 95.5) Plant calmodulin-binding protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Calmodulin-binding protein, plant (InterPro:IPR012417); BEST Arabidopsis thaliana protein match is: Plant calmodulin-binding protein-related (TAIR:AT5G15430.1); Has 1562 Blast hits to 1366 proteins in 187 species: Archae - 0; Bacteria - 45; Metazoa - 751; Fungi - 101; Plants - 192; Viruses - 10; Other Eukaryotes - 463 (source: NCBI BLink). & (reliability: 191.0) & (original description: Putative At5g07820, Description = Calmodulin-binding protein-like protein, PFAM = PF07839)' T '30.3' 'signalling.calcium' 'niben101scf09654_296895-304628' '(at5g37710 : 568.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity, calmodulin binding; INVOLVED IN: lipid catabolic process, lipid metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), Mono-/di-acylglycerol lipase, N-terminal (InterPro:IPR005592); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G49050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37299 : 284.0) no description available & (gnl|cdd|85661 : 94.6) no description available & (reliability: 1136.0) & (original description: Putative pco139551, Description = Calmodulin-binding heat-shock protein, PFAM = PF01764;PF03893)' T '30.3' 'signalling.calcium' 'niben101scf09867_139680-146753' '(at2g17290 : 928.0) Encodes calcium dependent protein kinase 6 (CPK6), a member of the Arabidopsis CDPK gene family. CDPKs contain an intrinsic Ca2+-activation domain with four EF hand Ca2+-binding sites. CDPKs protein kinases have been proposed to function in multiple plant signal transduction pathways downstream of [Ca2+]cyt elevations, thus transducing various physiological responses. CPK6 is expressed in both guard cells and mesophyll cells. Functions in guard cell ion channel regulation. ABA and Ca(2+) activation of slow-type anion channels and, interestingly, ABA activation of plasma membrane Ca(2+)-permeable channels were impaired in independent alleles of single and double cpk3cpk6 mutant guard cells. Furthermore, ABA- and Ca(2+)-induced stomatal closing were partially impaired in these cpk3cpk6 mutant alleles. CPK3 is also a member of the Arabidopsis CDPK family.; calcium dependent protein kinase 6 (CPK6); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of anion channel activity, protein amino acid phosphorylation, N-terminal protein myristoylation, abscisic acid mediated signaling pathway, regulation of stomatal movement; LOCATED IN: cytosol, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calmodulin-domain protein kinase 5 (TAIR:AT4G35310.1); Has 133264 Blast hits to 125497 proteins in 3863 species: Archae - 149; Bacteria - 13464; Metazoa - 49073; Fungi - 17503; Plants - 30048; Viruses - 473; Other Eukaryotes - 22554 (source: NCBI BLink). & (p53684|cdpk3_orysa : 746.0) Calcium-dependent protein kinase, isoform 11 (EC 2.7.11.1) (CDPK 11) - Oryza sativa (Rice) & (gnl|cdd|35255 : 420.0) no description available & (gnl|cdd|29142 : 279.0) no description available & (reliability: 1856.0) & (original description: Putative CPK4, Description = Calcium-dependent protein kinase 4, PFAM = PF00069;PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf10061_66999-76456' '(at4g17615 : 347.0) Member of AtCBL (Calcineurin B-like Calcium Sensor Proteins) family. Protein level is increased upon high salt, mannitol, and cold stresses. CBL1 interacts with CIPK23 and recruits the kinase to the plasma membrane where the substrate(s) of CIPK23 may reside. CBL1 localization is regulated by protein modification including myristolation and acylation.; calcineurin B-like protein 1 (CBL1); FUNCTIONS IN: calcium ion binding; INVOLVED IN: in 8 processes; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like protein 9 (TAIR:AT5G47100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35257 : 163.0) no description available & (reliability: 694.0) & (original description: Putative CBL1, Description = Calcineurin B-like protein 1, PFAM = PF13499)' T '30.3' 'signalling.calcium' 'niben101scf10196_181752-188097' '(at3g49050 : 556.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity, calmodulin binding; INVOLVED IN: lipid catabolic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), Mono-/di-acylglycerol lipase, N-terminal (InterPro:IPR005592); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G00500.2); Has 551 Blast hits to 551 proteins in 136 species: Archae - 0; Bacteria - 6; Metazoa - 153; Fungi - 88; Plants - 205; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (gnl|cdd|37299 : 297.0) no description available & (gnl|cdd|73213 : 109.0) no description available & (reliability: 1112.0) & (original description: Putative CaMBP, Description = Calmodulin-binding protein, PFAM = PF01764;PF03893)' T '30.3' 'signalling.calcium' 'niben101scf10259_83534-95861' '(at3g61050 : 600.0) NTMC2T4; FUNCTIONS IN: lipid binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: male gametophyte, cultured cell, callus, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G61030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34643 : 133.0) no description available & (reliability: 1200.0) & (original description: Putative SYT4, Description = Integral membrane single C2 domain protein, PFAM = PF00168;PF17047)' T '30.3' 'signalling.calcium' 'niben101scf10314_430476-466328' '(at5g28850 : 821.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G28900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37773 : 618.0) no description available & (reliability: 1642.0) & (original description: Putative B''BETA, Description = Serine/threonine protein phosphatase 2A regulatory subunit B''beta, PFAM = PF13499)' T '30.3' 'signalling.calcium' 'niben101scf10329_400372-411082' '(at5g08580 : 421.0) Calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT4G27790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39424 : 231.0) no description available & (reliability: 842.0) & (original description: Putative BnaC03g03690D, Description = BnaC03g03690D protein, PFAM = PF13499;PF13202;PF13833)' T '30.3' 'signalling.calcium' 'niben101scf10498_218218-226432' '(at5g19450 : 885.0) calcium-dependent protein kinase (CDPK19) mRNA, complete; calcium-dependent protein kinase 19 (CDPK19); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: calmodulin-domain protein kinase 7 (TAIR:AT5G12480.1); Has 121368 Blast hits to 118532 proteins in 3727 species: Archae - 180; Bacteria - 14366; Metazoa - 46503; Fungi - 14729; Plants - 22919; Viruses - 459; Other Eukaryotes - 22212 (source: NCBI BLink). & (p53683|cdpk2_orysa : 536.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (gnl|cdd|35255 : 391.0) no description available & (gnl|cdd|29142 : 282.0) no description available & (reliability: 1770.0) & (original description: Putative CPK8, Description = Calcium-dependent protein kinase 8, PFAM = PF13499;PF13499;PF00069)' T '30.3' 'signalling.calcium' 'niben101scf10502_135951-140327' '(at3g13600 : 608.0) calmodulin-binding family protein; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT3G58480.1); Has 2440 Blast hits to 1727 proteins in 273 species: Archae - 4; Bacteria - 163; Metazoa - 734; Fungi - 252; Plants - 308; Viruses - 55; Other Eukaryotes - 924 (source: NCBI BLink). & (reliability: 1216.0) & (original description: Putative IQM2, Description = IQ domain-containing protein IQM2, PFAM = )' T '30.3' 'signalling.calcium' 'niben101scf10620_15900-33070' '(p28583|cdpk_soybn : 800.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (at1g35670 : 774.0) Encodes a Ca(2+)-dependent, calmodulin-independent protein kinase that is rapidly induced by drought and high-salt stress but not by low-temperature stress or heat stress. Positive regulator of ABA signaling. Phosphorylates ABA responsive transcription factors ABF1 and ABF4.; calcium-dependent protein kinase 2 (CDPK2); FUNCTIONS IN: calmodulin-dependent protein kinase activity, kinase activity; INVOLVED IN: response to water deprivation, response to salt stress, protein amino acid phosphorylation, positive regulation of abscisic acid mediated signaling pathway; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 4 (TAIR:AT4G09570.1); Has 134131 Blast hits to 125244 proteins in 4234 species: Archae - 175; Bacteria - 14420; Metazoa - 49980; Fungi - 18055; Plants - 27559; Viruses - 606; Other Eukaryotes - 23336 (source: NCBI BLink). & (gnl|cdd|35255 : 400.0) no description available & (gnl|cdd|29142 : 279.0) no description available & (reliability: 1548.0) & (original description: Putative cpk9, Description = Calcium-dependent protein kinase 1, PFAM = PF00069;PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf10749_298648-301135' '(at1g50700 : 182.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 33 (CPK33); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calmodulin-domain protein kinase 9 (TAIR:AT3G20410.1); Has 135838 Blast hits to 127860 proteins in 4028 species: Archae - 164; Bacteria - 14368; Metazoa - 50670; Fungi - 18182; Plants - 28418; Viruses - 488; Other Eukaryotes - 23548 (source: NCBI BLink). & (p53683|cdpk2_orysa : 179.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (reliability: 364.0) & (original description: Putative cpk1, Description = Calcium-dependent protein kinase 3, PFAM = PF13499;PF13202)' T '30.3' 'signalling.calcium' 'niben101scf10796_57089-61723' '(at5g55990 : 374.0) Encodes a member of the Arabidopsis CBL (Calcineurin B-like Calcium Sensor) protein family.; calcineurin B-like protein 2 (CBL2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: calcium-mediated signaling; LOCATED IN: cytosolic ribosome, plant-type vacuole membrane, vacuole, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like 3 (TAIR:AT4G26570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35257 : 175.0) no description available & (reliability: 748.0) & (original description: Putative CBL2, Description = Calcineurin B-like protein 2, PFAM = PF13499;PF13833)' T '30.3' 'signalling.calcium' 'niben101scf10834_323053-331241' '(at1g08450 : 542.0) Encodes one of three Arabidopsis calreticulins. In CRT-deficient mouse fibroblasts, this protein restores ER Ca2+ levels. Non-receptor component required for EFR-mediated immunity. Mutants show de-repressed anthocyanin accumulation in the presence of elf18, and EFR accumulation and signalling.; calreticulin 3 (CRT3); FUNCTIONS IN: unfolded protein binding, calcium ion binding; INVOLVED IN: in 6 processes; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P (InterPro:IPR009033), Calreticulin/calnexin (InterPro:IPR001580), Calreticulin/calnexin, conserved site (InterPro:IPR018124), Calreticulin (InterPro:IPR009169), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: calreticulin 1a (TAIR:AT1G56340.2). & (gnl|cdd|35893 : 430.0) no description available & (q40401|calr_nicpl : 418.0) Calreticulin precursor - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|84651 : 331.0) no description available & (reliability: 1084.0) & (original description: Putative CALR, Description = Calreticulin, PFAM = PF00262;PF00262)' T '30.3' 'signalling.calcium' 'niben101scf11071_480911-487314' '(gnl|cdd|71325 : 367.0) no description available & (at1g73805 : 346.0) Calmodulin binding protein-like; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT5G57580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 692.0) & (original description: Putative Os01g0134700, Description = Calmodulin-binding protein-like, PFAM = PF07887)' T '30.3' 'signalling.calcium' 'niben101scf11084_13835-25558' '(at3g57330 : 1419.0) autoinhibited Ca2+-ATPase 11 (ACA11); FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: defense response to bacterium, negative regulation of programmed cell death, anion homeostasis; LOCATED IN: plant-type vacuole membrane, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: autoinhibited Ca(2+)-ATPase, isoform 4 (TAIR:AT2G41560.1); Has 45492 Blast hits to 34566 proteins in 3220 species: Archae - 840; Bacteria - 31068; Metazoa - 4067; Fungi - 2704; Plants - 2054; Viruses - 3; Other Eukaryotes - 4756 (source: NCBI BLink). & (q2qy12|aca4_orysa : 1367.0) Probable calcium-transporting ATPase 4, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 4) - Oryza sativa (Rice) & (gnl|cdd|35425 : 1362.0) no description available & (gnl|cdd|30822 : 603.0) no description available & (reliability: 2838.0) & (original description: Putative ACA11, Description = Putative calcium-transporting ATPase 11, plasma membrane-type, PFAM = PF12515;PF00690;PF00702;PF00689;PF00122)' T '30.3' 'signalling.calcium' 'niben101scf11105_200762-204646' '(at5g42380 : 112.0) calmodulin like 37 (CML37); FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to ozone; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin-like 38 (TAIR:AT1G76650.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35250 : 102.0) no description available & (reliability: 224.0) & (original description: Putative CML38, Description = Calcium-binding protein CML38, PFAM = PF13833;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf11154_93465-103548' '(at1g05500 : 836.0) Encodes a endomembrane-localized synaptotagmin. Synaptotagmin family proteins are calcium sensors that regulate exocytosis in mammalian cells.; NTMC2T2.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT5G11100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34643 : 147.0) no description available & (gnl|cdd|36246 : 102.0) no description available & (reliability: 1516.0) & (original description: Putative SYT5, Description = Synaptotagmin-5, PFAM = PF00168;PF00168;PF17047)' T '30.3' 'signalling.calcium' 'niben101scf11305_193612-196286' '(at2g41410 : 143.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G10190.1); Has 13145 Blast hits to 9942 proteins in 1264 species: Archae - 0; Bacteria - 67; Metazoa - 5109; Fungi - 2319; Plants - 3772; Viruses - 0; Other Eukaryotes - 1878 (source: NCBI BLink). & (gnl|cdd|35250 : 115.0) no description available & (reliability: 286.0) & (original description: Putative CML35, Description = Probable calcium-binding protein CML35, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf12589_52632-60060' '(at2g38910 : 844.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 20 (CPK20); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium dependent protein kinase 1 (TAIR:AT5G04870.1); Has 134628 Blast hits to 127183 proteins in 3957 species: Archae - 159; Bacteria - 14419; Metazoa - 50012; Fungi - 17942; Plants - 28393; Viruses - 493; Other Eukaryotes - 23210 (source: NCBI BLink). & (p28583|cdpk_soybn : 649.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (gnl|cdd|35255 : 401.0) no description available & (gnl|cdd|29142 : 271.0) no description available & (reliability: 1688.0) & (original description: Putative CPK20, Description = Calcium-dependent protein kinase 20, PFAM = PF13499;PF13499;PF00069)' T '30.3' 'signalling.calcium' 'niben101scf12589_52676-55828' '(at2g38910 : 290.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 20 (CPK20); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium dependent protein kinase 1 (TAIR:AT5G04870.1); Has 134628 Blast hits to 127183 proteins in 3957 species: Archae - 159; Bacteria - 14419; Metazoa - 50012; Fungi - 17942; Plants - 28393; Viruses - 493; Other Eukaryotes - 23210 (source: NCBI BLink). & (p28583|cdpk_soybn : 252.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (gnl|cdd|35250 : 92.8) no description available & (reliability: 580.0) & (original description: Putative cpk12, Description = Calcium-dependent protein kinase 1, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf13289_13784-16343' '(at1g76650 : 113.0) calmodulin-like 38 (CML38); CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G76640.1). & (gnl|cdd|35250 : 107.0) no description available & (reliability: 226.0) & (original description: Putative CML38, Description = Calcium-binding protein CML38, PFAM = PF13833;PF13833)' T '30.3' 'signalling.calcium' 'niben101scf13289_55713-58300' '(at1g76650 : 114.0) calmodulin-like 38 (CML38); CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G76640.1). & (gnl|cdd|35250 : 105.0) no description available & (reliability: 228.0) & (original description: Putative CML37, Description = Calcium-binding protein CML37, PFAM = PF13833;PF13833)' T '30.3' 'signalling.calcium' 'niben101scf13361_113572-121269' '(at3g52870 : 506.0) IQ calmodulin-binding motif family protein; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT3G58480.1); Has 341 Blast hits to 277 proteins in 58 species: Archae - 0; Bacteria - 26; Metazoa - 0; Fungi - 100; Plants - 209; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 1012.0) & (original description: Putative IQM3, Description = IQ domain-containing protein IQM3, PFAM = )' T '30.3' 'signalling.calcium' 'niben101scf13391_114138-122266' '(at5g04870 : 758.0) A calcium-dependent protein kinase that can phosphorylate phenylalanine ammonia lyase (PAL), a key enzyme in pathogen defense.; calcium dependent protein kinase 1 (CPK1); FUNCTIONS IN: protein binding, calmodulin-dependent protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: peroxisome, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calmodulin-domain protein kinase cdpk isoform 2 (TAIR:AT3G10660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p28583|cdpk_soybn : 662.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (gnl|cdd|35255 : 391.0) no description available & (gnl|cdd|29142 : 275.0) no description available & (reliability: 1516.0) & (original description: Putative CDPK, Description = Calcium-dependent calmodulin-independent protein kinase, PFAM = PF00069;PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf13666_7662-11818' '(gnl|cdd|71278 : 119.0) no description available & (at2g38800 : 110.0) Plant calmodulin-binding protein-related; CONTAINS InterPro DOMAIN/s: Calmodulin-binding protein, plant (InterPro:IPR012417); BEST Arabidopsis thaliana protein match is: Plant calmodulin-binding protein-related (TAIR:AT3G54570.1); Has 4321 Blast hits to 2381 proteins in 392 species: Archae - 26; Bacteria - 2334; Metazoa - 540; Fungi - 255; Plants - 198; Viruses - 28; Other Eukaryotes - 940 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative Zm.64915, Description = Plant calmodulin-binding-like protein, PFAM = PF07839)' T '30.3' 'signalling.calcium' 'niben101scf13926_113990-120795' '(at4g34150 : 189.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: soybean gene regulated by cold-2 (TAIR:AT1G09070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36248 : 96.1) no description available & (reliability: 378.0) & (original description: Putative At4g34150, Description = AT4g34150/F28A23_90, PFAM = PF00168)' T '30.3' 'signalling.calcium' 'niben101scf14233_50096-73638' '(at5g07300 : 778.0) Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms.; BONZAI 2 (BON2); FUNCTIONS IN: calcium-dependent phospholipid binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36541 : 502.0) no description available & (gnl|cdd|29232 : 303.0) no description available & (reliability: 1556.0) & (original description: Putative BON2, Description = Protein BONZAI 2, PFAM = PF00168;PF00168;PF07002)' T '30.3' 'signalling.calcium' 'niben101scf15166_295770-302892' '(at4g26570 : 370.0) member of AtCBLs (Calcineurin B-like Calcium Sensor Proteins); calcineurin B-like 3 (CBL3); FUNCTIONS IN: calcium ion binding; INVOLVED IN: detection of calcium ion; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like protein 2 (TAIR:AT5G55990.1); Has 7988 Blast hits to 7953 proteins in 833 species: Archae - 0; Bacteria - 10; Metazoa - 3891; Fungi - 1253; Plants - 1902; Viruses - 0; Other Eukaryotes - 932 (source: NCBI BLink). & (gnl|cdd|35257 : 177.0) no description available & (reliability: 740.0) & (original description: Putative CBL3, Description = Calcineurin B-like protein 3, PFAM = PF13833;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf15327_114878-118266' '(at3g50770 : 166.0) calmodulin-like 41 (CML41); FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin-like 38 (TAIR:AT1G76650.3); Has 18492 Blast hits to 11277 proteins in 1402 species: Archae - 0; Bacteria - 68; Metazoa - 6531; Fungi - 4523; Plants - 4805; Viruses - 0; Other Eukaryotes - 2565 (source: NCBI BLink). & (gnl|cdd|35250 : 110.0) no description available & (p04352|calm_chlre : 82.8) Calmodulin (CaM) - Chlamydomonas reinhardtii & (reliability: 332.0) & (original description: Putative CML41, Description = Probable calcium-binding protein CML41, PFAM = PF13833;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf15532_218248-228411' '(at3g20290 : 888.0) Encodes AtEHD1, one of the Arabidopsis Eps15 homology domain proteins involved in endocytosis (AtEHD2, At4g05520).; EPS15 homology domain 1 (EHD1); FUNCTIONS IN: GTP binding, GTPase activity, calcium ion binding; INVOLVED IN: endocytosis; LOCATED IN: endosome, microsome, membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EPS15 homology (EH) (InterPro:IPR000261), Dynamin, GTPase domain (InterPro:IPR001401), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: EPS15 homology domain 2 (TAIR:AT4G05520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37165 : 588.0) no description available & (gnl|cdd|84713 : 98.5) no description available & (reliability: 1776.0) & (original description: Putative EHD1, Description = EH domain-containing protein 1, PFAM = PF16880;PF12763;PF00350)' T '30.3' 'signalling.calcium' 'niben101scf16651_14989-17459' '(at1g18210 : 165.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family (TAIR:AT1G73630.1); Has 26408 Blast hits to 16156 proteins in 1551 species: Archae - 2; Bacteria - 177; Metazoa - 9876; Fungi - 6429; Plants - 6014; Viruses - 0; Other Eukaryotes - 3910 (source: NCBI BLink). & (gnl|cdd|35250 : 125.0) no description available & (p13868|calm1_soltu : 98.6) Calmodulin-1 (CaM-1) - Solanum tuberosum (Potato) & (gnl|cdd|34727 : 96.5) no description available & (reliability: 330.0) & (original description: Putative cbl1, Description = Calmodulin 24-like protein, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf16833_12164-16172' '(at2g27030 : 248.0) encodes a calmodulin that has higher affinity to kinesin-like calmodulin binding motor protein than CAM4 or CAM6.; calmodulin 5 (CAM5); FUNCTIONS IN: calcium ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 3 (TAIR:AT3G56800.1); Has 36011 Blast hits to 23475 proteins in 1766 species: Archae - 4; Bacteria - 234; Metazoa - 15635; Fungi - 7487; Plants - 7311; Viruses - 0; Other Eukaryotes - 5340 (source: NCBI BLink). & (p27164|calm3_pethy : 245.0) Calmodulin-related protein - Petunia hybrida (Petunia) & (gnl|cdd|34727 : 156.0) no description available & (gnl|cdd|35250 : 155.0) no description available & (reliability: 496.0) & (original description: Putative CAM7, Description = Calmodulin-7, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf17629_22400-26814' '(at1g05150 : 1151.0) Calcium-binding tetratricopeptide family protein; FUNCTIONS IN: binding, zinc ion binding, calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), EF-HAND 2 (InterPro:IPR018249), Zinc finger, ZZ-type (InterPro:IPR000433), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Calcium-binding tetratricopeptide family protein (TAIR:AT2G32450.1); Has 35451 Blast hits to 16647 proteins in 1701 species: Archae - 1586; Bacteria - 18304; Metazoa - 4207; Fungi - 680; Plants - 951; Viruses - 0; Other Eukaryotes - 9723 (source: NCBI BLink). & (gnl|cdd|39826 : 107.0) no description available & (reliability: 2302.0) & (original description: Putative At1g05150, Description = Uncharacterized TPR repeat-containing protein At1g05150, PFAM = PF13414;PF13432)' T '30.3' 'signalling.calcium' 'niben101scf17776_69669-80880' '(q6ret7|ccamk_medtr : 686.0) Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3 (EC 2.7.11.17) (Does not make infections protein 3) (CCaMK DMI3) (MtCCaMK) - Medicago truncatula (Barrel medic) & (gnl|cdd|35255 : 250.0) no description available & (at5g12180 : 238.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 17 (CPK17); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of pollen tube growth, protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 34 (TAIR:AT5G19360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29142 : 233.0) no description available & (reliability: 476.0) & (original description: Putative CCaMK, Description = Calcium/calmodulin dependent protein kinase, PFAM = PF13499;PF13202;PF00069)' T '30.3' 'signalling.calcium' 'niben101scf18039_1604-3951' '(at5g54490 : 117.0) Encodes a PINOID (PID)-binding protein containing putative EF-hand calcium-binding motifs. The interaction is dependent on the presence of calcium. mRNA expression is up-regulated by auxin. Not a phosphorylation target of PID, likely acts upstream of PID to regulate the activity of this protein in response to changes in calcium levels.; pinoid-binding protein 1 (PBP1); CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT4G27280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative ccd1, Description = Calcium-binding EF-hand protein, PFAM = PF13833)' T '30.3' 'signalling.calcium' 'niben101scf18068_154327-157718' '(gnl|cdd|71278 : 125.0) no description available & (at2g38800 : 107.0) Plant calmodulin-binding protein-related; CONTAINS InterPro DOMAIN/s: Calmodulin-binding protein, plant (InterPro:IPR012417); BEST Arabidopsis thaliana protein match is: Plant calmodulin-binding protein-related (TAIR:AT3G54570.1); Has 4321 Blast hits to 2381 proteins in 392 species: Archae - 26; Bacteria - 2334; Metazoa - 540; Fungi - 255; Plants - 198; Viruses - 28; Other Eukaryotes - 940 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative Zm.64915, Description = Plant calmodulin-binding-like protein, PFAM = PF07839)' T '30.3' 'signalling.calcium' 'niben101scf18955_17213-26301' '(at3g52870 : 516.0) IQ calmodulin-binding motif family protein; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT3G58480.1); Has 341 Blast hits to 277 proteins in 58 species: Archae - 0; Bacteria - 26; Metazoa - 0; Fungi - 100; Plants - 209; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 1032.0) & (original description: Putative IQM3, Description = IQ domain-containing protein IQM3, PFAM = )' T '30.3' 'signalling.calcium' 'niben101scf19315_50938-56366' '(at3g58480 : 527.0) calmodulin-binding family protein; BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT3G13600.1); Has 404 Blast hits to 327 proteins in 76 species: Archae - 0; Bacteria - 22; Metazoa - 8; Fungi - 105; Plants - 225; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 1054.0) & (original description: Putative IQM6, Description = IQ domain-containing protein IQM6, PFAM = )' T '30.3' 'signalling.calcium' 'niben101scf19911_10533-15027' '(at1g73805 : 395.0) Calmodulin binding protein-like; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT5G57580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71325 : 355.0) no description available & (reliability: 790.0) & (original description: Putative SARD1, Description = Protein SAR DEFICIENT 1, PFAM = PF07887)' T '30.3' 'signalling.calcium' 'niben101scf20000_60432-80708' '(at5g28850 : 791.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G28900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37773 : 605.0) no description available & (reliability: 1582.0) & (original description: Putative BnaCnng72610D, Description = BnaCnng72610D protein, PFAM = PF13499)' T '30.3' 'signalling.calcium' 'niben101scf20564_9624-12298' '(at2g41410 : 138.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G10190.1); Has 13145 Blast hits to 9942 proteins in 1264 species: Archae - 0; Bacteria - 67; Metazoa - 5109; Fungi - 2319; Plants - 3772; Viruses - 0; Other Eukaryotes - 1878 (source: NCBI BLink). & (gnl|cdd|35250 : 112.0) no description available & (reliability: 276.0) & (original description: Putative CML35, Description = Calmodulin-like family protein, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf21301_110133-112582' '(at3g07490 : 198.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ARF-GAP domain 11 (AGD11); FUNCTIONS IN: calcium ion binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Parvalbumin (InterPro:IPR008080), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT2G43290.1); Has 25143 Blast hits to 16842 proteins in 1503 species: Archae - 3; Bacteria - 170; Metazoa - 10890; Fungi - 4135; Plants - 6085; Viruses - 0; Other Eukaryotes - 3860 (source: NCBI BLink). & (gnl|cdd|35250 : 117.0) no description available & (p04352|calm_chlre : 98.2) Calmodulin (CaM) - Chlamydomonas reinhardtii & (gnl|cdd|34727 : 92.2) no description available & (reliability: 396.0) & (original description: Putative CML3, Description = Calmodulin-like protein 3, PFAM = PF13499;PF13499)' T '30.3' 'signalling.calcium' 'niben101scf21817_88008-93192' '(at5g03040 : 231.0) IQ-domain 2 (iqd2); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 1 (TAIR:AT3G09710.1). & (reliability: 462.0) & (original description: Putative iqd2, Description = AT5g03040/F15A17_70, PFAM = PF13178;PF00612)' T '30.3' 'signalling.calcium' 'niben101scf23355_142302-149455' '(at5g04220 : 404.0) SYTC; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: synaptotagmin A (TAIR:AT2G20990.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34643 : 118.0) no description available & (gnl|cdd|36246 : 88.3) no description available & (reliability: 808.0) & (original description: Putative SYT1, Description = Calcium lipid binding protein, putative, PFAM = PF00168;PF00168)' T '30.3' 'signalling.calcium' 'niben101scf25602_14288-18139' '(at2g27030 : 247.0) encodes a calmodulin that has higher affinity to kinesin-like calmodulin binding motor protein than CAM4 or CAM6.; calmodulin 5 (CAM5); FUNCTIONS IN: calcium ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 3 (TAIR:AT3G56800.1); Has 36011 Blast hits to 23475 proteins in 1766 species: Archae - 4; Bacteria - 234; Metazoa - 15635; Fungi - 7487; Plants - 7311; Viruses - 0; Other Eukaryotes - 5340 (source: NCBI BLink). & (p27164|calm3_pethy : 244.0) Calmodulin-related protein - Petunia hybrida (Petunia) & (gnl|cdd|35250 : 156.0) no description available & (gnl|cdd|34727 : 156.0) no description available & (reliability: 494.0) & (original description: Putative CCM1, Description = Calmodulin, PFAM = PF13499;PF13499)' T '30.4' 'signalling.phosphinositides' 'nbv0.3scaffold6619_1-12939' '(at2g15900 : 862.0) Phox-associated domain;Phox-like;Sorting nexin, C-terminal; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PX-associated, sorting nexin 13 (InterPro:IPR013996), Sorting nexin, C-terminal (InterPro:IPR013937), Phox-like (InterPro:IPR001683), Phox-associated domain (InterPro:IPR003114); BEST Arabidopsis thaliana protein match is: Phox-associated domain;Phox-like;Sorting nexin, C-terminal (TAIR:AT1G15240.2); Has 1078 Blast hits to 871 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 658; Fungi - 203; Plants - 141; Viruses - 2; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 1724.0) & (original description: Putative At2g15900, Description = Sorting nexin-16, PFAM = PF02194;PF08628)' T '30.4' 'signalling.phosphinositides' 'nbv0.3scaffold63610_1-10921' '(at2g17930 : 2174.0) Phosphatidylinositol 3- and 4-kinase family protein with FAT domain; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), PIK-related kinase, FAT (InterPro:IPR003151), PIK-related kinase (InterPro:IPR014009), Armadillo-type fold (InterPro:IPR016024), PIK-related kinase, FATC (InterPro:IPR003152), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases (TAIR:AT4G36080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36107 : 1286.0) no description available & (reliability: 4348.0) & (original description: Putative BnaCnng66780D, Description = BnaCnng66780D protein, PFAM = )' T '30.4' 'signalling.phosphinositides' 'nbv0.3scaffold65002_1-10552' '(at3g14205 : 845.0) Phosphoinositide phosphatase family protein; FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2094 Blast hits to 1659 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 659; Plants - 270; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (gnl|cdd|37099 : 751.0) no description available & (gnl|cdd|66103 : 282.0) no description available & (reliability: 1690.0) & (original description: Putative SAC4, Description = Phosphoinositide phosphatase SAC4, PFAM = PF02383)' T '30.4' 'signalling.phosphinositides' 'nbv0.3scaffold83877_1-5463' '(at3g14205 : 322.0) Phosphoinositide phosphatase family protein; FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2094 Blast hits to 1659 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 659; Plants - 270; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (gnl|cdd|37099 : 265.0) no description available & (gnl|cdd|66103 : 121.0) no description available & (reliability: 644.0) & (original description: Putative FIG4, Description = Polyphosphoinositide phosphatase, PFAM = PF02383)' T '30.4' 'signalling.phosphinositides' 'nbv0.5scaffold8_653715-686483' '(at3g59770 : 2040.0) Encodes a phosphoinositide phosphatase. The sac9 null mutant accumulates elevated levels of PtdIns(4,5)P2 and Ins(1,4,5)P3. The mutant plants have characteristics of constitutive stress responses.; SUPPRESSOR OF ACTIN 9 (SAC9); CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202), Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT1G17340.1). & (gnl|cdd|37099 : 469.0) no description available & (gnl|cdd|34909 : 108.0) no description available & (reliability: 4080.0) & (original description: Putative SAC9, Description = Probable phosphoinositide phosphatase SAC9, PFAM = PF00397;PF02383)' T '30.4' 'signalling.phosphinositides' 'nbv0.5scaffold1362_260928-264651' '(at4g20260 : 134.0) Encodes a Ca2+ and Cu2+ binding protein. N-terminal myristylation on glycine 2 appears to enable it to associate tightly with the plasma membrane. Recombinant PCaP1 interacts strongly with phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2) and PtdIns (3,4,5)P3, and weakly with PtdIns(3,5)P2 and PtdIns(4,5). It also interacts with calmodulin (CaM) in a calcium-dependent manner. CaM does not interfere with PCaP1 membrane localization but does weaken interactions between it and the PtdInsPs. PCaP1 has an apparent Kd of 10 uM for Cu2+ and can bind six ions per protein. Transcript levels for PCaP1 first fall and then rise following exposure to CuCl2. Mannitol, sorbitol, and the flg22 oligopeptide also increase expression levels.; plasma-membrane associated cation-binding protein 1 (PCAP1); FUNCTIONS IN: calmodulin binding, copper ion binding, phosphatidylinositol-3,4,5-trisphosphate binding, phosphatidylinositol-3,5-bisphosphate binding, calcium ion binding; INVOLVED IN: response to cold, N-terminal peptidyl-glycine N-myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 34 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DREPP plasma membrane polypeptide (InterPro:IPR008469). & (gnl|cdd|69100 : 105.0) no description available & (reliability: 268.0) & (original description: Putative rs1, Description = DREPP4 protein, PFAM = PF05558)' T '30.4' 'signalling.phosphinositides' 'nbv0.5scaffold1568_208221-244104' '(at1g49340 : 2598.0) Encodes a phosphatidylinositol 4-kinase that is expressed in inflorescences and shoots.; ATPI4K ALPHA; FUNCTIONS IN: 1-phosphatidylinositol 4-kinase activity, inositol or phosphatidylinositol kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: shoot, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), Phosphoinositide 3-kinase, accessory (PIK) domain (InterPro:IPR001263), Phosphatidylinositol Kinase (InterPro:IPR015433), Armadillo-type fold (InterPro:IPR016024), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G51040.1); Has 2472 Blast hits to 2328 proteins in 267 species: Archae - 0; Bacteria - 0; Metazoa - 1180; Fungi - 474; Plants - 245; Viruses - 4; Other Eukaryotes - 569 (source: NCBI BLink). & (gnl|cdd|36120 : 1407.0) no description available & (gnl|cdd|29058 : 441.0) no description available & (p42347|pi3k1_soybn : 154.0) Phosphatidylinositol 3-kinase, root isoform (EC 2.7.1.137) (PI3-kinase) (PtdIns-3-kinase) (PI3K) (SPI3K-5) - Glycine max (Soybean) & (reliability: 5196.0) & (original description: Putative pi4K1, Description = Phosphatidylinositol 4-kinase, PFAM = PF00613;PF00454)' T '30.4' 'signalling.phosphinositides' 'nbv0.5scaffold5533_137588-141507' '(at2g03890 : 827.0) Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains.; phosphoinositide 4-kinase gamma 7 (PI4K GAMMA 7); FUNCTIONS IN: inositol or phosphatidylinositol kinase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase family protein (TAIR:AT1G13640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37592 : 314.0) no description available & (gnl|cdd|84784 : 118.0) no description available & (reliability: 1654.0) & (original description: Putative PI4KG7, Description = Phosphatidylinositol 4-kinase gamma 7, PFAM = PF00454)' T '30.4' 'signalling.phosphinositides' 'nbv0.5scaffold6074_8746-12451' '(at4g20260 : 141.0) Encodes a Ca2+ and Cu2+ binding protein. N-terminal myristylation on glycine 2 appears to enable it to associate tightly with the plasma membrane. Recombinant PCaP1 interacts strongly with phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2) and PtdIns (3,4,5)P3, and weakly with PtdIns(3,5)P2 and PtdIns(4,5). It also interacts with calmodulin (CaM) in a calcium-dependent manner. CaM does not interfere with PCaP1 membrane localization but does weaken interactions between it and the PtdInsPs. PCaP1 has an apparent Kd of 10 uM for Cu2+ and can bind six ions per protein. Transcript levels for PCaP1 first fall and then rise following exposure to CuCl2. Mannitol, sorbitol, and the flg22 oligopeptide also increase expression levels.; plasma-membrane associated cation-binding protein 1 (PCAP1); FUNCTIONS IN: calmodulin binding, copper ion binding, phosphatidylinositol-3,4,5-trisphosphate binding, phosphatidylinositol-3,5-bisphosphate binding, calcium ion binding; INVOLVED IN: response to cold, N-terminal peptidyl-glycine N-myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 34 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DREPP plasma membrane polypeptide (InterPro:IPR008469). & (gnl|cdd|69100 : 105.0) no description available & (p83649|srs1_orysa : 89.7) Salt-stress root protein RS1 - Oryza sativa (Rice) & (reliability: 282.0) & (original description: Putative drepp4, Description = 22 kDa polypeptide, PFAM = PF05558)' T '30.4' 'signalling.phosphinositides' 'nbv0.5scaffold6995_1572-16073' '(at2g15900 : 1017.0) Phox-associated domain;Phox-like;Sorting nexin, C-terminal; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PX-associated, sorting nexin 13 (InterPro:IPR013996), Sorting nexin, C-terminal (InterPro:IPR013937), Phox-like (InterPro:IPR001683), Phox-associated domain (InterPro:IPR003114); BEST Arabidopsis thaliana protein match is: Phox-associated domain;Phox-like;Sorting nexin, C-terminal (TAIR:AT1G15240.2); Has 1078 Blast hits to 871 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 658; Fungi - 203; Plants - 141; Viruses - 2; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|85027 : 82.7) no description available & (reliability: 2034.0) & (original description: Putative At2g15900, Description = Phox domain-containing protein, PFAM = PF02194;PF00787;PF08628)' T '30.4' 'signalling.phosphinositides' 'niben044scf00001037ctg011_1-7704' '(at4g36080 : 534.0) phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), PIK-related kinase, FAT (InterPro:IPR003151), PIK-related kinase (InterPro:IPR014009), Armadillo-type fold (InterPro:IPR016024), PIK-related kinase, FATC (InterPro:IPR003152), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (TAIR:AT2G17930.1). & (gnl|cdd|36107 : 277.0) no description available & (reliability: 1068.0) & (original description: Putative tra1, Description = Phosphotransferases/inositol or phosphatidylinositol kinases, PFAM = )' T '30.4' 'signalling.phosphinositides' 'niben044scf00004926ctg016_5225-7911' '(at1g22620 : 142.0) SAC domain phosphoinositide (3,5)P2 phosphatase. Colocalized with a Golgi Marker. Required for normal cell morphogenesis, cell wall synthesis, and actin organization.; suppressor of actin 1 (ATSAC1); CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT3G14205.1); Has 2374 Blast hits to 1664 proteins in 228 species: Archae - 0; Bacteria - 0; Metazoa - 925; Fungi - 777; Plants - 320; Viruses - 0; Other Eukaryotes - 352 (source: NCBI BLink). & (gnl|cdd|37099 : 81.2) no description available & (reliability: 284.0) & (original description: Putative FIG4, Description = Polyphosphoinositide phosphatase, PFAM = )' T '30.4' 'signalling.phosphinositides' 'niben044scf00009268ctg006_1879-4364' '(at5g05710 : 230.0) Pleckstrin homology (PH) domain superfamily protein; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: pleckstrin homologue 1 (TAIR:AT2G29700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative PH1, Description = AtPH1, PFAM = PF00169)' T '30.4' 'signalling.phosphinositides' 'niben044scf00015734ctg029_40171-62094' '(at3g59770 : 1238.0) Encodes a phosphoinositide phosphatase. The sac9 null mutant accumulates elevated levels of PtdIns(4,5)P2 and Ins(1,4,5)P3. The mutant plants have characteristics of constitutive stress responses.; SUPPRESSOR OF ACTIN 9 (SAC9); CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202), Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT1G17340.1). & (gnl|cdd|37099 : 156.0) no description available & (reliability: 2476.0) & (original description: Putative CFS, Description = Synaptojanin, N-terminal, PFAM = )' T '30.4' 'signalling.phosphinositides' 'niben044scf00015734ctg031_3871-6473' '(at3g59770 : 301.0) Encodes a phosphoinositide phosphatase. The sac9 null mutant accumulates elevated levels of PtdIns(4,5)P2 and Ins(1,4,5)P3. The mutant plants have characteristics of constitutive stress responses.; SUPPRESSOR OF ACTIN 9 (SAC9); CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202), Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT1G17340.1). & (gnl|cdd|37099 : 164.0) no description available & (reliability: 602.0) & (original description: Putative Sb04g038155, Description = Putative uncharacterized protein Sb04g038155, PFAM = PF02383)' T '30.4' 'signalling.phosphinositides' 'niben044scf00017378ctg001_1687-5734' '(at2g03890 : 865.0) Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains.; phosphoinositide 4-kinase gamma 7 (PI4K GAMMA 7); FUNCTIONS IN: inositol or phosphatidylinositol kinase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase family protein (TAIR:AT1G13640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37592 : 317.0) no description available & (gnl|cdd|84784 : 115.0) no description available & (reliability: 1730.0) & (original description: Putative pk, Description = Putative phosphatidylinositol 4-kinase type 2-beta, PFAM = PF00454)' T '30.4' 'signalling.phosphinositides' 'niben044scf00021298ctg011_12913-15461' '(at2g29700 : 216.0) Encodes a protein containing one PH (pleckstrin homology) domain with a short N-terminal extension; pleckstrin homologue 1 (PH1); CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Pleckstrin homology (PH) domain superfamily protein (TAIR:AT5G05710.1); Has 2358 Blast hits to 2352 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 1854; Fungi - 32; Plants - 108; Viruses - 3; Other Eukaryotes - 361 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative PH1, Description = Pleckstrin homology domain-containing protein 1, PFAM = PF00169)' T '30.4' 'signalling.phosphinositides' 'niben044scf00022042ctg012_890-7780' '(at3g43220 : 537.0) Phosphoinositide phosphatase family protein; FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2101 Blast hits to 1628 proteins in 221 species: Archae - 0; Bacteria - 0; Metazoa - 799; Fungi - 628; Plants - 328; Viruses - 0; Other Eukaryotes - 346 (source: NCBI BLink). & (gnl|cdd|37099 : 454.0) no description available & (gnl|cdd|66103 : 133.0) no description available & (reliability: 1062.0) & (original description: Putative FIG4, Description = Polyphosphoinositide phosphatase, PFAM = PF02383)' T '30.4' 'signalling.phosphinositides' 'niben044scf00023258ctg001_1-16547' '(at2g17930 : 4408.0) Phosphatidylinositol 3- and 4-kinase family protein with FAT domain; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), PIK-related kinase, FAT (InterPro:IPR003151), PIK-related kinase (InterPro:IPR014009), Armadillo-type fold (InterPro:IPR016024), PIK-related kinase, FATC (InterPro:IPR003152), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases (TAIR:AT4G36080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36107 : 2487.0) no description available & (gnl|cdd|34637 : 176.0) no description available & (reliability: 8816.0) & (original description: Putative BnaA09g09370D, Description = BnaA09g09370D protein, PFAM = PF02260;PF02259;PF00454)' T '30.4' 'signalling.phosphinositides' 'niben044scf00033554ctg001_6526-12310' '(at3g14205 : 331.0) Phosphoinositide phosphatase family protein; FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2094 Blast hits to 1659 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 659; Plants - 270; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (gnl|cdd|37099 : 270.0) no description available & (gnl|cdd|66103 : 122.0) no description available & (reliability: 662.0) & (original description: Putative FIG4, Description = Polyphosphoinositide phosphatase, PFAM = PF02383)' T '30.4' 'signalling.phosphinositides' 'niben101scf00077_50556-54271' '(at2g40850 : 481.0) phosphoinositide 4-kinase gamma 1 (PI4K GAMMA 1); FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: tapetum, microspore; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G56600.2); Has 555 Blast hits to 545 proteins in 145 species: Archae - 0; Bacteria - 2; Metazoa - 130; Fungi - 70; Plants - 264; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). & (gnl|cdd|37592 : 267.0) no description available & (gnl|cdd|84784 : 125.0) no description available & (reliability: 962.0) & (original description: Putative PI4KG1, Description = Phosphatidylinositol 4-kinase gamma 1, PFAM = PF00454)' T '30.4' 'signalling.phosphinositides' 'niben101scf00585_227949-239869' '(at5g66020 : 976.0) Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. non-consensus AT donor splice site at exon 7, TA donor splice site at exon 10, AT acceptor splice at exon 13.; SUPPRESSOR OF ACTIN 1B (ATSAC1B); CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT3G51460.1); Has 1740 Blast hits to 1632 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 569; Fungi - 574; Plants - 290; Viruses - 0; Other Eukaryotes - 307 (source: NCBI BLink). & (gnl|cdd|37100 : 710.0) no description available & (gnl|cdd|34909 : 331.0) no description available & (reliability: 1952.0) & (original description: Putative SAC6, Description = Phosphoinositide phosphatase SAC6, PFAM = PF02383)' T '30.4' 'signalling.phosphinositides' 'niben101scf00700_497398-501751' '(at4g20260 : 141.0) Encodes a Ca2+ and Cu2+ binding protein. N-terminal myristylation on glycine 2 appears to enable it to associate tightly with the plasma membrane. Recombinant PCaP1 interacts strongly with phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2) and PtdIns (3,4,5)P3, and weakly with PtdIns(3,5)P2 and PtdIns(4,5). It also interacts with calmodulin (CaM) in a calcium-dependent manner. CaM does not interfere with PCaP1 membrane localization but does weaken interactions between it and the PtdInsPs. PCaP1 has an apparent Kd of 10 uM for Cu2+ and can bind six ions per protein. Transcript levels for PCaP1 first fall and then rise following exposure to CuCl2. Mannitol, sorbitol, and the flg22 oligopeptide also increase expression levels.; plasma-membrane associated cation-binding protein 1 (PCAP1); FUNCTIONS IN: calmodulin binding, copper ion binding, phosphatidylinositol-3,4,5-trisphosphate binding, phosphatidylinositol-3,5-bisphosphate binding, calcium ion binding; INVOLVED IN: response to cold, N-terminal peptidyl-glycine N-myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 34 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DREPP plasma membrane polypeptide (InterPro:IPR008469). & (gnl|cdd|69100 : 102.0) no description available & (p83649|srs1_orysa : 89.7) Salt-stress root protein RS1 - Oryza sativa (Rice) & (reliability: 282.0) & (original description: Putative PCAP1, Description = Plasma membrane-associated cation-binding protein 1, PFAM = PF05558)' T '30.4' 'signalling.phosphinositides' 'niben101scf01049_474859-517117' '(at1g49340 : 1686.0) Encodes a phosphatidylinositol 4-kinase that is expressed in inflorescences and shoots.; ATPI4K ALPHA; FUNCTIONS IN: 1-phosphatidylinositol 4-kinase activity, inositol or phosphatidylinositol kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: shoot, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), Phosphoinositide 3-kinase, accessory (PIK) domain (InterPro:IPR001263), Phosphatidylinositol Kinase (InterPro:IPR015433), Armadillo-type fold (InterPro:IPR016024), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G51040.1); Has 2472 Blast hits to 2328 proteins in 267 species: Archae - 0; Bacteria - 0; Metazoa - 1180; Fungi - 474; Plants - 245; Viruses - 4; Other Eukaryotes - 569 (source: NCBI BLink). & (gnl|cdd|36120 : 697.0) no description available & (gnl|cdd|29058 : 441.0) no description available & (p42348|pi3k2_soybn : 122.0) Phosphatidylinositol 3-kinase, nodule isoform (EC 2.7.1.137) (PI3-kinase) (PtdIns-3-kinase) (PI3K) (SPI3K-1) - Glycine max (Soybean) & (reliability: 3372.0) & (original description: Putative PI4KA, Description = PI4KA, PFAM = PF00454)' T '30.4' 'signalling.phosphinositides' 'niben101scf01049_485927-488515' '(at1g49340 : 223.0) Encodes a phosphatidylinositol 4-kinase that is expressed in inflorescences and shoots.; ATPI4K ALPHA; FUNCTIONS IN: 1-phosphatidylinositol 4-kinase activity, inositol or phosphatidylinositol kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: shoot, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), Phosphoinositide 3-kinase, accessory (PIK) domain (InterPro:IPR001263), Phosphatidylinositol Kinase (InterPro:IPR015433), Armadillo-type fold (InterPro:IPR016024), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G51040.1); Has 2472 Blast hits to 2328 proteins in 267 species: Archae - 0; Bacteria - 0; Metazoa - 1180; Fungi - 474; Plants - 245; Viruses - 4; Other Eukaryotes - 569 (source: NCBI BLink). & (gnl|cdd|36120 : 163.0) no description available & (reliability: 446.0) & (original description: Putative pi4K1, Description = Phosphatidylinositol 4-kinase alpha, PFAM = )' T '30.4' 'signalling.phosphinositides' 'niben101scf01498_1158351-1176220' '(at1g22620 : 1379.0) SAC domain phosphoinositide (3,5)P2 phosphatase. Colocalized with a Golgi Marker. Required for normal cell morphogenesis, cell wall synthesis, and actin organization.; suppressor of actin 1 (ATSAC1); CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT3G14205.1); Has 2374 Blast hits to 1664 proteins in 228 species: Archae - 0; Bacteria - 0; Metazoa - 925; Fungi - 777; Plants - 320; Viruses - 0; Other Eukaryotes - 352 (source: NCBI BLink). & (gnl|cdd|37099 : 934.0) no description available & (gnl|cdd|66103 : 331.0) no description available & (reliability: 2758.0) & (original description: Putative SAC1, Description = Phosphoinositide phosphatase SAC1, PFAM = PF02383)' T '30.4' 'signalling.phosphinositides' 'niben101scf01694_923782-926213' '(at2g29700 : 214.0) Encodes a protein containing one PH (pleckstrin homology) domain with a short N-terminal extension; pleckstrin homologue 1 (PH1); CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Pleckstrin homology (PH) domain superfamily protein (TAIR:AT5G05710.1); Has 2358 Blast hits to 2352 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 1854; Fungi - 32; Plants - 108; Viruses - 3; Other Eukaryotes - 361 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative PH1, Description = Pleckstrin homology domain-containing protein 1, PFAM = PF00169)' T '30.4' 'signalling.phosphinositides' 'niben101scf02203_345243-369957' '(at5g66020 : 976.0) Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. non-consensus AT donor splice site at exon 7, TA donor splice site at exon 10, AT acceptor splice at exon 13.; SUPPRESSOR OF ACTIN 1B (ATSAC1B); CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT3G51460.1); Has 1740 Blast hits to 1632 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 569; Fungi - 574; Plants - 290; Viruses - 0; Other Eukaryotes - 307 (source: NCBI BLink). & (gnl|cdd|37100 : 714.0) no description available & (gnl|cdd|34909 : 333.0) no description available & (reliability: 1952.0) & (original description: Putative SAC7, Description = Phosphoinositide phosphatase SAC7, PFAM = PF02383)' T '30.4' 'signalling.phosphinositides' 'niben101scf02824_228152-232071' '(at2g03890 : 872.0) Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains.; phosphoinositide 4-kinase gamma 7 (PI4K GAMMA 7); FUNCTIONS IN: inositol or phosphatidylinositol kinase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase family protein (TAIR:AT1G13640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37592 : 314.0) no description available & (gnl|cdd|84784 : 117.0) no description available & (reliability: 1744.0) & (original description: Putative PI4KG7, Description = Phosphatidylinositol 4-kinase gamma 7, PFAM = PF00454)' T '30.4' 'signalling.phosphinositides' 'niben101scf03392_998102-1027701' '(at3g59770 : 1252.0) Encodes a phosphoinositide phosphatase. The sac9 null mutant accumulates elevated levels of PtdIns(4,5)P2 and Ins(1,4,5)P3. The mutant plants have characteristics of constitutive stress responses.; SUPPRESSOR OF ACTIN 9 (SAC9); CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202), Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT1G17340.1). & (gnl|cdd|37099 : 160.0) no description available & (reliability: 2504.0) & (original description: Putative CFS, Description = Synaptojanin, N-terminal, PFAM = )' T '30.4' 'signalling.phosphinositides' 'niben101scf03392_1001380-1042607' '(at3g59770 : 2026.0) Encodes a phosphoinositide phosphatase. The sac9 null mutant accumulates elevated levels of PtdIns(4,5)P2 and Ins(1,4,5)P3. The mutant plants have characteristics of constitutive stress responses.; SUPPRESSOR OF ACTIN 9 (SAC9); CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202), Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT1G17340.1). & (gnl|cdd|37099 : 468.0) no description available & (gnl|cdd|34909 : 110.0) no description available & (reliability: 4052.0) & (original description: Putative SAC9, Description = Probable phosphoinositide phosphatase SAC9, PFAM = PF02383;PF00397)' T '30.4' 'signalling.phosphinositides' 'niben101scf03776_10464-55801' '(at5g20840 : 914.0) Phosphoinositide phosphatase family protein; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT3G43220.1); Has 1872 Blast hits to 1673 proteins in 232 species: Archae - 0; Bacteria - 12; Metazoa - 657; Fungi - 613; Plants - 279; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink). & (gnl|cdd|37099 : 767.0) no description available & (gnl|cdd|66103 : 280.0) no description available & (reliability: 1828.0) & (original description: Putative SAC4, Description = Phosphoinositide phosphatase SAC4, PFAM = PF02383)' T '30.4' 'signalling.phosphinositides' 'niben101scf03776_34609-40178' '(at3g43220 : 346.0) Phosphoinositide phosphatase family protein; FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2101 Blast hits to 1628 proteins in 221 species: Archae - 0; Bacteria - 0; Metazoa - 799; Fungi - 628; Plants - 328; Viruses - 0; Other Eukaryotes - 346 (source: NCBI BLink). & (gnl|cdd|37099 : 303.0) no description available & (gnl|cdd|66103 : 133.0) no description available & (reliability: 676.0) & (original description: Putative FIG4, Description = Polyphosphoinositide phosphatase, PFAM = PF02383)' T '30.4' 'signalling.phosphinositides' 'niben101scf04187_243388-247307' '(at2g03890 : 874.0) Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains.; phosphoinositide 4-kinase gamma 7 (PI4K GAMMA 7); FUNCTIONS IN: inositol or phosphatidylinositol kinase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase family protein (TAIR:AT1G13640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37592 : 317.0) no description available & (gnl|cdd|84784 : 115.0) no description available & (reliability: 1748.0) & (original description: Putative PI4KG7, Description = Phosphatidylinositol 4-kinase gamma 7, PFAM = PF00454)' T '30.4' 'signalling.phosphinositides' 'niben101scf05307_343804-356128' '(at3g51830 : 845.0) putative transmembrane protein G5p (AtG5) mRNA, complete; SAC domain-containing protein 8 (SAC8); FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G66020.1). & (gnl|cdd|37100 : 507.0) no description available & (gnl|cdd|34909 : 317.0) no description available & (reliability: 1690.0) & (original description: Putative SAC8, Description = Phosphoinositide phosphatase SAC8, PFAM = PF02383)' T '30.4' 'signalling.phosphinositides' 'niben101scf05468_1050415-1071518' '(at3g59770 : 1366.0) Encodes a phosphoinositide phosphatase. The sac9 null mutant accumulates elevated levels of PtdIns(4,5)P2 and Ins(1,4,5)P3. The mutant plants have characteristics of constitutive stress responses.; SUPPRESSOR OF ACTIN 9 (SAC9); CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202), Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT1G17340.1). & (gnl|cdd|37099 : 453.0) no description available & (gnl|cdd|34909 : 105.0) no description available & (reliability: 2732.0) & (original description: Putative Sb04g038155, Description = Putative uncharacterized protein Sb04g038155, PFAM = PF02383;PF00397)' T '30.4' 'signalling.phosphinositides' 'niben101scf07763_303518-314870' '(at3g14205 : 869.0) Phosphoinositide phosphatase family protein; FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2094 Blast hits to 1659 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 659; Plants - 270; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (gnl|cdd|37099 : 777.0) no description available & (gnl|cdd|66103 : 284.0) no description available & (reliability: 1738.0) & (original description: Putative SAC2, Description = Phosphoinositide phosphatase SAC2, PFAM = PF02383)' T '30.4' 'signalling.phosphinositides' 'niben101scf08127_243746-247662' '(at2g03890 : 900.0) Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains.; phosphoinositide 4-kinase gamma 7 (PI4K GAMMA 7); FUNCTIONS IN: inositol or phosphatidylinositol kinase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase family protein (TAIR:AT1G13640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37592 : 313.0) no description available & (gnl|cdd|84784 : 116.0) no description available & (reliability: 1800.0) & (original description: Putative PI4KG7, Description = Phosphatidylinositol 4-kinase gamma 7, PFAM = PF00454)' T '30.4' 'signalling.phosphinositides' 'niben101scf08407_135319-146379' '(at3g14205 : 900.0) Phosphoinositide phosphatase family protein; FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2094 Blast hits to 1659 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 659; Plants - 270; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (gnl|cdd|37099 : 808.0) no description available & (gnl|cdd|66103 : 301.0) no description available & (reliability: 1800.0) & (original description: Putative SAC2, Description = Phosphoinositide phosphatase SAC2, PFAM = PF02383)' T '30.4' 'signalling.phosphinositides' 'niben101scf11107_1346-50532' '(at2g17930 : 4271.0) Phosphatidylinositol 3- and 4-kinase family protein with FAT domain; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), PIK-related kinase, FAT (InterPro:IPR003151), PIK-related kinase (InterPro:IPR014009), Armadillo-type fold (InterPro:IPR016024), PIK-related kinase, FATC (InterPro:IPR003152), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases (TAIR:AT4G36080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36107 : 2356.0) no description available & (gnl|cdd|34637 : 173.0) no description available & (reliability: 8542.0) & (original description: Putative At2g17930, Description = Putative uncharacterized protein At2g17930, PFAM = PF02259;PF02260;PF00454)' T '30.4' 'signalling.phosphinositides' 'niben101scf11886_189358-193081' '(at4g20260 : 134.0) Encodes a Ca2+ and Cu2+ binding protein. N-terminal myristylation on glycine 2 appears to enable it to associate tightly with the plasma membrane. Recombinant PCaP1 interacts strongly with phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2) and PtdIns (3,4,5)P3, and weakly with PtdIns(3,5)P2 and PtdIns(4,5). It also interacts with calmodulin (CaM) in a calcium-dependent manner. CaM does not interfere with PCaP1 membrane localization but does weaken interactions between it and the PtdInsPs. PCaP1 has an apparent Kd of 10 uM for Cu2+ and can bind six ions per protein. Transcript levels for PCaP1 first fall and then rise following exposure to CuCl2. Mannitol, sorbitol, and the flg22 oligopeptide also increase expression levels.; plasma-membrane associated cation-binding protein 1 (PCAP1); FUNCTIONS IN: calmodulin binding, copper ion binding, phosphatidylinositol-3,4,5-trisphosphate binding, phosphatidylinositol-3,5-bisphosphate binding, calcium ion binding; INVOLVED IN: response to cold, N-terminal peptidyl-glycine N-myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 34 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DREPP plasma membrane polypeptide (InterPro:IPR008469). & (gnl|cdd|69100 : 106.0) no description available & (reliability: 268.0) & (original description: Putative rs1, Description = Plasma-membrane associated cation-binding protein 1, PFAM = PF05558)' T '30.4' 'signalling.phosphinositides' 'niben101scf12686_63696-78649' '(at2g15900 : 1016.0) Phox-associated domain;Phox-like;Sorting nexin, C-terminal; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PX-associated, sorting nexin 13 (InterPro:IPR013996), Sorting nexin, C-terminal (InterPro:IPR013937), Phox-like (InterPro:IPR001683), Phox-associated domain (InterPro:IPR003114); BEST Arabidopsis thaliana protein match is: Phox-associated domain;Phox-like;Sorting nexin, C-terminal (TAIR:AT1G15240.2); Has 1078 Blast hits to 871 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 658; Fungi - 203; Plants - 141; Viruses - 2; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|85027 : 85.1) no description available & (reliability: 2032.0) & (original description: Putative At2g15900, Description = Phox domain-containing protein, PFAM = PF02194;PF00787;PF08628)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'nbv0.3scaffold6845_36599-46673' '(gnl|cdd|35451 : 871.0) no description available & (at4g33240 : 507.0) Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization.; FORMS APLOID AND BINUCLEATE CELLS 1A (FAB1A); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT3G14270.1). & (gnl|cdd|73183 : 274.0) no description available & (reliability: 1014.0) & (original description: Putative FAB1D, Description = 1-phosphatidylinositol-3-phosphate 5-kinase FAB1, PFAM = PF01504;PF01504;PF00118)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'nbv0.3scaffold8285_29751-42808' '(at1g34260 : 338.0) Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown.; FORMS APLOID AND BINUCLEATE CELLS 1A (FAB1D); FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: phosphatidylinositol metabolic process, cellular protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: FORMS APLOID AND BINUCLEATE CELLS 1C (TAIR:AT1G71010.1); Has 3115 Blast hits to 2757 proteins in 368 species: Archae - 419; Bacteria - 0; Metazoa - 983; Fungi - 610; Plants - 538; Viruses - 0; Other Eukaryotes - 565 (source: NCBI BLink). & (gnl|cdd|35451 : 335.0) no description available & (gnl|cdd|48151 : 268.0) no description available & (reliability: 676.0) & (original description: Putative FAB1A, Description = 1-phosphatidylinositol-3-phosphate 5-kinase FAB1, PFAM = PF00118;PF01504)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'nbv0.3scaffold17138_1-5112' '(at1g21980 : 449.0) Type I phosphatidylinositol-4-phosphate 5-kinase. Preferentially phosphorylates PtdIns4P. Induced by water stress and abscisic acid in Arabidopsis thaliana. Expressed in procambial cells of leaves, flowers and roots. A N-terminal Membrane Occupation and Recognition Nexus (MORN)affects enzyme activity and distribution.; phosphatidylinositol-4-phosphate 5-kinase 1 (PIP5K1); CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase 2 (TAIR:AT1G77740.1); Has 28574 Blast hits to 7954 proteins in 630 species: Archae - 0; Bacteria - 3995; Metazoa - 4425; Fungi - 453; Plants - 2526; Viruses - 0; Other Eukaryotes - 17175 (source: NCBI BLink). & (gnl|cdd|35450 : 414.0) no description available & (gnl|cdd|47658 : 323.0) no description available & (q6ex42|pi5k1_orysa : 303.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (reliability: 898.0) & (original description: Putative P5K1, Description = Phosphatidylinositol-4-phosphate 5-kinase family protein, PFAM = PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF01504)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'nbv0.3scaffold25643_16300-21468' '(at3g56960 : 1017.0) Encodes a protein with phosphatidylinositol-4-phosphate 5-kinase activity that plays a role in pollen tip growth. The enzyme localizes to the apical plasma membrane and adjacent cytosolic region of pollen tubes. Overexpression of this gene leads to increased deposition of pectin in the cell wall at the tip of the pollen tube and causes altered pollen tube morphology.; phosphatidyl inositol monophosphate 5 kinase 4 (PIP5K4); CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol- 4-phosphate 5-kinase 5 (TAIR:AT2G41210.1); Has 27454 Blast hits to 7705 proteins in 602 species: Archae - 2; Bacteria - 4208; Metazoa - 4073; Fungi - 443; Plants - 2320; Viruses - 0; Other Eukaryotes - 16408 (source: NCBI BLink). & (q6ex42|pi5k1_orysa : 553.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (gnl|cdd|35450 : 493.0) no description available & (gnl|cdd|47658 : 380.0) no description available & (reliability: 2034.0) & (original description: Putative PIP5K4, Description = Phosphatidylinositol 4-phosphate 5-kinase 4, PFAM = PF01504;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'nbv0.3scaffold27800_4061-10052' '(at4g17080 : 290.0) Histone H3 K4-specific methyltransferase SET7/9 family protein; CONTAINS InterPro DOMAIN/s: MORN motif (InterPro:IPR003409); BEST Arabidopsis thaliana protein match is: Histone H3 K4-specific methyltransferase SET7/9 family protein (TAIR:AT2G35170.1); Has 26543 Blast hits to 6479 proteins in 565 species: Archae - 0; Bacteria - 4119; Metazoa - 3892; Fungi - 164; Plants - 2567; Viruses - 0; Other Eukaryotes - 15801 (source: NCBI BLink). & (gnl|cdd|35452 : 160.0) no description available & (gnl|cdd|34261 : 88.1) no description available & (reliability: 580.0) & (original description: Putative BnaC06g20770D, Description = BnaC06g20770D protein, PFAM = PF02493;PF02493;PF02493;PF02493;PF02493;PF02493)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'nbv0.5scaffold126_878412-891469' '(at1g34260 : 337.0) Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown.; FORMS APLOID AND BINUCLEATE CELLS 1A (FAB1D); FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: phosphatidylinositol metabolic process, cellular protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: FORMS APLOID AND BINUCLEATE CELLS 1C (TAIR:AT1G71010.1); Has 3115 Blast hits to 2757 proteins in 368 species: Archae - 419; Bacteria - 0; Metazoa - 983; Fungi - 610; Plants - 538; Viruses - 0; Other Eukaryotes - 565 (source: NCBI BLink). & (gnl|cdd|35451 : 335.0) no description available & (gnl|cdd|48151 : 268.0) no description available & (reliability: 674.0) & (original description: Putative FAB1A, Description = 1-phosphatidylinositol-3-phosphate 5-kinase FAB1, PFAM = PF01504;PF00118)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'nbv0.5scaffold609_121552-133353' '(at1g60890 : 993.0) Phosphatidylinositol-4-phosphate 5-kinase family protein; FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: phosphatidylinositol metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT1G10900.1). & (q6ex42|pi5k1_orysa : 823.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (gnl|cdd|35450 : 467.0) no description available & (gnl|cdd|47658 : 363.0) no description available & (reliability: 1986.0) & (original description: Putative PIP5K8, Description = Phosphatidylinositol 4-phosphate 5-kinase 8, PFAM = PF01504;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'nbv0.5scaffold939_64632-71772' '(at4g17080 : 366.0) Histone H3 K4-specific methyltransferase SET7/9 family protein; CONTAINS InterPro DOMAIN/s: MORN motif (InterPro:IPR003409); BEST Arabidopsis thaliana protein match is: Histone H3 K4-specific methyltransferase SET7/9 family protein (TAIR:AT2G35170.1); Has 26543 Blast hits to 6479 proteins in 565 species: Archae - 0; Bacteria - 4119; Metazoa - 3892; Fungi - 164; Plants - 2567; Viruses - 0; Other Eukaryotes - 15801 (source: NCBI BLink). & (gnl|cdd|35452 : 204.0) no description available & (gnl|cdd|34261 : 86.2) no description available & (reliability: 732.0) & (original description: Putative dl4570w, Description = Putative uncharacterized protein AT4g17080, PFAM = PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'nbv0.5scaffold2643_297536-308467' '(at3g09920 : 1213.0) phosphatidyl inositol monophosphate 5 kinase (PIP5K9); FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: carbohydrate metabolic process, cellular amino acid metabolic process; LOCATED IN: cytosol, nucleus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT1G60890.1). & (q6ex42|pi5k1_orysa : 756.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (gnl|cdd|35450 : 504.0) no description available & (gnl|cdd|47658 : 365.0) no description available & (reliability: 2426.0) & (original description: Putative PIP5K9, Description = Phosphatidylinositol 4-phosphate 5-kinase 9, PFAM = PF01504;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'nbv0.5scaffold7491_28833-31272' '(at3g14270 : 86.3) Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization.; FORMS APLOID AND BINUCLEATE CELLS 1B (FAB1B); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion binding;1-phosphatidylinositol-3-phosphate 5-kinases (TAIR:AT4G33240.2); Has 8765 Blast hits to 8134 proteins in 458 species: Archae - 587; Bacteria - 13; Metazoa - 3836; Fungi - 1744; Plants - 978; Viruses - 3; Other Eukaryotes - 1604 (source: NCBI BLink). & (gnl|cdd|35451 : 80.4) no description available & (reliability: 172.6) & (original description: Putative FAB1B, Description = 1-phosphatidylinositol-3-phosphate 5-kinase FAB1, PFAM = )' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben044scf00002361ctg001_724-3313' '(at4g33240 : 172.0) Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization.; FORMS APLOID AND BINUCLEATE CELLS 1A (FAB1A); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT3G14270.1). & (reliability: 344.0) & (original description: Putative FAB1A, Description = 1-phosphatidylinositol-3-phosphate 5-kinase FAB1, PFAM = PF01363)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben044scf00008957ctg009_830-7178' '(at3g56960 : 926.0) Encodes a protein with phosphatidylinositol-4-phosphate 5-kinase activity that plays a role in pollen tip growth. The enzyme localizes to the apical plasma membrane and adjacent cytosolic region of pollen tubes. Overexpression of this gene leads to increased deposition of pectin in the cell wall at the tip of the pollen tube and causes altered pollen tube morphology.; phosphatidyl inositol monophosphate 5 kinase 4 (PIP5K4); CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol- 4-phosphate 5-kinase 5 (TAIR:AT2G41210.1); Has 27454 Blast hits to 7705 proteins in 602 species: Archae - 2; Bacteria - 4208; Metazoa - 4073; Fungi - 443; Plants - 2320; Viruses - 0; Other Eukaryotes - 16408 (source: NCBI BLink). & (gnl|cdd|35450 : 433.0) no description available & (gnl|cdd|47658 : 363.0) no description available & (q6ex42|pi5k1_orysa : 317.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (reliability: 1852.0) & (original description: Putative P5K1, Description = Phosphatidylinositol-4-phosphate 5-kinase family protein, PFAM = PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF01504)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben044scf00012385ctg000_220-11774' '(at3g14270 : 1942.0) Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization.; FORMS APLOID AND BINUCLEATE CELLS 1B (FAB1B); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion binding;1-phosphatidylinositol-3-phosphate 5-kinases (TAIR:AT4G33240.2); Has 8765 Blast hits to 8134 proteins in 458 species: Archae - 587; Bacteria - 13; Metazoa - 3836; Fungi - 1744; Plants - 978; Viruses - 3; Other Eukaryotes - 1604 (source: NCBI BLink). & (gnl|cdd|35451 : 1567.0) no description available & (gnl|cdd|48151 : 381.0) no description available & (reliability: 3884.0) & (original description: Putative FAB1B, Description = 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B, PFAM = PF00118;PF01363;PF01504)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben044scf00032317ctg007_1-7173' '(at3g09920 : 950.0) phosphatidyl inositol monophosphate 5 kinase (PIP5K9); FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: carbohydrate metabolic process, cellular amino acid metabolic process; LOCATED IN: cytosol, nucleus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT1G60890.1). & (q6ex42|pi5k1_orysa : 573.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (gnl|cdd|35450 : 363.0) no description available & (gnl|cdd|47658 : 267.0) no description available & (reliability: 1900.0) & (original description: Putative Os02g0822500, Description = Os02g0822500 protein, PFAM = PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF01504)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben044scf00038016ctg000_2672-4642' '(at3g14270 : 182.0) Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization.; FORMS APLOID AND BINUCLEATE CELLS 1B (FAB1B); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion binding;1-phosphatidylinositol-3-phosphate 5-kinases (TAIR:AT4G33240.2); Has 8765 Blast hits to 8134 proteins in 458 species: Archae - 587; Bacteria - 13; Metazoa - 3836; Fungi - 1744; Plants - 978; Viruses - 3; Other Eukaryotes - 1604 (source: NCBI BLink). & (gnl|cdd|35451 : 174.0) no description available & (gnl|cdd|73183 : 114.0) no description available & (reliability: 364.0) & (original description: Putative fab1, Description = 1-phosphatidylinositol-3-phosphate 5-kinase-like, PFAM = PF01504)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben044scf00038016ctg001_1-9579' '(at3g14270 : 1756.0) Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization.; FORMS APLOID AND BINUCLEATE CELLS 1B (FAB1B); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion binding;1-phosphatidylinositol-3-phosphate 5-kinases (TAIR:AT4G33240.2); Has 8765 Blast hits to 8134 proteins in 458 species: Archae - 587; Bacteria - 13; Metazoa - 3836; Fungi - 1744; Plants - 978; Viruses - 3; Other Eukaryotes - 1604 (source: NCBI BLink). & (gnl|cdd|35451 : 1385.0) no description available & (gnl|cdd|48151 : 387.0) no description available & (p54411|tcpe2_avesa : 80.5) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 3512.0) & (original description: Putative BnaC05g42630D, Description = BnaC05g42630D protein, PFAM = PF00118;PF01363;PF01504)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben101scf00781_334021-338227' '(at1g21920 : 370.0) Histone H3 K4-specific methyltransferase SET7/9 family protein; CONTAINS InterPro DOMAIN/s: MORN motif (InterPro:IPR003409); BEST Arabidopsis thaliana protein match is: Histone H3 K4-specific methyltransferase SET7/9 family protein (TAIR:AT1G77660.1); Has 24355 Blast hits to 6247 proteins in 541 species: Archae - 0; Bacteria - 3533; Metazoa - 3700; Fungi - 215; Plants - 2241; Viruses - 0; Other Eukaryotes - 14666 (source: NCBI BLink). & (gnl|cdd|35452 : 204.0) no description available & (q6ex42|pi5k1_orysa : 105.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (reliability: 740.0) & (original description: Putative BnaC05g17280D, Description = BnaC05g17280D protein, PFAM = PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben101scf00801_163460-168747' '(at3g56960 : 1025.0) Encodes a protein with phosphatidylinositol-4-phosphate 5-kinase activity that plays a role in pollen tip growth. The enzyme localizes to the apical plasma membrane and adjacent cytosolic region of pollen tubes. Overexpression of this gene leads to increased deposition of pectin in the cell wall at the tip of the pollen tube and causes altered pollen tube morphology.; phosphatidyl inositol monophosphate 5 kinase 4 (PIP5K4); CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol- 4-phosphate 5-kinase 5 (TAIR:AT2G41210.1); Has 27454 Blast hits to 7705 proteins in 602 species: Archae - 2; Bacteria - 4208; Metazoa - 4073; Fungi - 443; Plants - 2320; Viruses - 0; Other Eukaryotes - 16408 (source: NCBI BLink). & (q6ex42|pi5k1_orysa : 555.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (gnl|cdd|35450 : 501.0) no description available & (gnl|cdd|47658 : 390.0) no description available & (reliability: 2050.0) & (original description: Putative PIP5K4, Description = Phosphatidylinositol 4-phosphate 5-kinase 4, PFAM = PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF01504)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben101scf01102_290487-297708' '(at3g07960 : 1043.0) Phosphatidylinositol-4-phosphate 5-kinase family protein; FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: phosphatidylinositol metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol- 4-phosphate 5-kinase 5 (TAIR:AT2G41210.1); Has 28977 Blast hits to 7880 proteins in 615 species: Archae - 0; Bacteria - 4479; Metazoa - 4240; Fungi - 468; Plants - 2497; Viruses - 0; Other Eukaryotes - 17293 (source: NCBI BLink). & (q6ex42|pi5k1_orysa : 590.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (gnl|cdd|35450 : 516.0) no description available & (gnl|cdd|47658 : 391.0) no description available & (reliability: 2086.0) & (original description: Putative P5K1, Description = Phosphatidylinositol-4-phosphate 5-kinase family protein, PFAM = PF01504;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben101scf01209_272044-279318' '(at1g21980 : 807.0) Type I phosphatidylinositol-4-phosphate 5-kinase. Preferentially phosphorylates PtdIns4P. Induced by water stress and abscisic acid in Arabidopsis thaliana. Expressed in procambial cells of leaves, flowers and roots. A N-terminal Membrane Occupation and Recognition Nexus (MORN)affects enzyme activity and distribution.; phosphatidylinositol-4-phosphate 5-kinase 1 (PIP5K1); CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase 2 (TAIR:AT1G77740.1); Has 28574 Blast hits to 7954 proteins in 630 species: Archae - 0; Bacteria - 3995; Metazoa - 4425; Fungi - 453; Plants - 2526; Viruses - 0; Other Eukaryotes - 17175 (source: NCBI BLink). & (gnl|cdd|35450 : 479.0) no description available & (gnl|cdd|47658 : 376.0) no description available & (q6ex42|pi5k1_orysa : 353.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (reliability: 1614.0) & (original description: Putative PIP5K1, Description = Phosphatidylinositol 4-phosphate 5-kinase 1, PFAM = PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF01504)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben101scf01412_24653-36144' '(at3g14270 : 1981.0) Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization.; FORMS APLOID AND BINUCLEATE CELLS 1B (FAB1B); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion binding;1-phosphatidylinositol-3-phosphate 5-kinases (TAIR:AT4G33240.2); Has 8765 Blast hits to 8134 proteins in 458 species: Archae - 587; Bacteria - 13; Metazoa - 3836; Fungi - 1744; Plants - 978; Viruses - 3; Other Eukaryotes - 1604 (source: NCBI BLink). & (gnl|cdd|35451 : 1564.0) no description available & (gnl|cdd|48151 : 389.0) no description available & (reliability: 3962.0) & (original description: Putative FAB1B, Description = 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B, PFAM = PF01363;PF00118;PF01504)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben101scf01745_592023-597284' '(at4g17080 : 437.0) Histone H3 K4-specific methyltransferase SET7/9 family protein; CONTAINS InterPro DOMAIN/s: MORN motif (InterPro:IPR003409); BEST Arabidopsis thaliana protein match is: Histone H3 K4-specific methyltransferase SET7/9 family protein (TAIR:AT2G35170.1); Has 26543 Blast hits to 6479 proteins in 565 species: Archae - 0; Bacteria - 4119; Metazoa - 3892; Fungi - 164; Plants - 2567; Viruses - 0; Other Eukaryotes - 15801 (source: NCBI BLink). & (gnl|cdd|35452 : 213.0) no description available & (q6ex42|pi5k1_orysa : 105.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (gnl|cdd|34261 : 84.6) no description available & (reliability: 874.0) & (original description: Putative dl4570w, Description = Putative uncharacterized protein AT4g17080, PFAM = PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben101scf01954_139880-150044' '(at3g07960 : 1046.0) Phosphatidylinositol-4-phosphate 5-kinase family protein; FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: phosphatidylinositol metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol- 4-phosphate 5-kinase 5 (TAIR:AT2G41210.1); Has 28977 Blast hits to 7880 proteins in 615 species: Archae - 0; Bacteria - 4479; Metazoa - 4240; Fungi - 468; Plants - 2497; Viruses - 0; Other Eukaryotes - 17293 (source: NCBI BLink). & (q6ex42|pi5k1_orysa : 590.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (gnl|cdd|35450 : 517.0) no description available & (gnl|cdd|47658 : 391.0) no description available & (reliability: 2092.0) & (original description: Putative PIP5K6, Description = Phosphatidylinositol 4-phosphate 5-kinase 6, PFAM = PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF01504)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben101scf02122_36738-54245' '(at1g60890 : 986.0) Phosphatidylinositol-4-phosphate 5-kinase family protein; FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: phosphatidylinositol metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT1G10900.1). & (q6ex42|pi5k1_orysa : 812.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (gnl|cdd|35450 : 466.0) no description available & (gnl|cdd|47658 : 361.0) no description available & (reliability: 1972.0) & (original description: Putative PIP5K8, Description = Phosphatidylinositol 4-phosphate 5-kinase 8, PFAM = PF01504;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben101scf02429_116990-122907' '(at1g21980 : 1150.0) Type I phosphatidylinositol-4-phosphate 5-kinase. Preferentially phosphorylates PtdIns4P. Induced by water stress and abscisic acid in Arabidopsis thaliana. Expressed in procambial cells of leaves, flowers and roots. A N-terminal Membrane Occupation and Recognition Nexus (MORN)affects enzyme activity and distribution.; phosphatidylinositol-4-phosphate 5-kinase 1 (PIP5K1); CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase 2 (TAIR:AT1G77740.1); Has 28574 Blast hits to 7954 proteins in 630 species: Archae - 0; Bacteria - 3995; Metazoa - 4425; Fungi - 453; Plants - 2526; Viruses - 0; Other Eukaryotes - 17175 (source: NCBI BLink). & (q6ex42|pi5k1_orysa : 600.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (gnl|cdd|35450 : 538.0) no description available & (gnl|cdd|47658 : 388.0) no description available & (reliability: 2300.0) & (original description: Putative PIP5K2, Description = Phosphatidylinositol 4-phosphate 5-kinase 2, PFAM = PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF01504)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben101scf02613_693116-705082' '(gnl|cdd|35451 : 971.0) no description available & (at3g14270 : 721.0) Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization.; FORMS APLOID AND BINUCLEATE CELLS 1B (FAB1B); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion binding;1-phosphatidylinositol-3-phosphate 5-kinases (TAIR:AT4G33240.2); Has 8765 Blast hits to 8134 proteins in 458 species: Archae - 587; Bacteria - 13; Metazoa - 3836; Fungi - 1744; Plants - 978; Viruses - 3; Other Eukaryotes - 1604 (source: NCBI BLink). & (gnl|cdd|48151 : 275.0) no description available & (reliability: 1442.0) & (original description: Putative glysoja_000448, Description = 1-phosphatidylinositol-3-phosphate 5-kinase, PFAM = PF00118;PF01504;PF01504)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben101scf02768_50807-57117' '(at4g17080 : 364.0) Histone H3 K4-specific methyltransferase SET7/9 family protein; CONTAINS InterPro DOMAIN/s: MORN motif (InterPro:IPR003409); BEST Arabidopsis thaliana protein match is: Histone H3 K4-specific methyltransferase SET7/9 family protein (TAIR:AT2G35170.1); Has 26543 Blast hits to 6479 proteins in 565 species: Archae - 0; Bacteria - 4119; Metazoa - 3892; Fungi - 164; Plants - 2567; Viruses - 0; Other Eukaryotes - 15801 (source: NCBI BLink). & (gnl|cdd|35452 : 210.0) no description available & (gnl|cdd|34261 : 87.3) no description available & (reliability: 728.0) & (original description: Putative BnaC07g14190D, Description = BnaC07g14190D protein, PFAM = PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben101scf03340_827072-837199' '(gnl|cdd|35451 : 979.0) no description available & (at1g34260 : 540.0) Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown.; FORMS APLOID AND BINUCLEATE CELLS 1A (FAB1D); FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: phosphatidylinositol metabolic process, cellular protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: FORMS APLOID AND BINUCLEATE CELLS 1C (TAIR:AT1G71010.1); Has 3115 Blast hits to 2757 proteins in 368 species: Archae - 419; Bacteria - 0; Metazoa - 983; Fungi - 610; Plants - 538; Viruses - 0; Other Eukaryotes - 565 (source: NCBI BLink). & (gnl|cdd|73183 : 275.0) no description available & (reliability: 1080.0) & (original description: Putative KK1_027087, Description = 1-phosphatidylinositol-3-phosphate 5-kinase, PFAM = PF00118;PF01504;PF01504)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben101scf05827_596944-608297' '(at3g14270 : 1941.0) Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization.; FORMS APLOID AND BINUCLEATE CELLS 1B (FAB1B); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion binding;1-phosphatidylinositol-3-phosphate 5-kinases (TAIR:AT4G33240.2); Has 8765 Blast hits to 8134 proteins in 458 species: Archae - 587; Bacteria - 13; Metazoa - 3836; Fungi - 1744; Plants - 978; Viruses - 3; Other Eukaryotes - 1604 (source: NCBI BLink). & (gnl|cdd|35451 : 1570.0) no description available & (gnl|cdd|48151 : 381.0) no description available & (reliability: 3882.0) & (original description: Putative FAB1B, Description = 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B, PFAM = PF01504;PF00118;PF01363)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben101scf07044_312337-322822' '(at1g71010 : 1070.0) Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown.; FORMS APLOID AND BINUCLEATE CELLS 1C (FAB1C); FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: phosphatidylinositol metabolic process, cellular protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT3G14270.1); Has 4961 Blast hits to 4644 proteins in 430 species: Archae - 584; Bacteria - 4; Metazoa - 1658; Fungi - 1043; Plants - 685; Viruses - 0; Other Eukaryotes - 987 (source: NCBI BLink). & (gnl|cdd|35451 : 866.0) no description available & (gnl|cdd|73183 : 314.0) no description available & (reliability: 2140.0) & (original description: Putative FAB1A, Description = 1-phosphatidylinositol-3-phosphate 5-kinase FAB1, PFAM = PF01504;PF00118)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben101scf09595_512256-520749' '(at1g34260 : 341.0) Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown.; FORMS APLOID AND BINUCLEATE CELLS 1A (FAB1D); FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: phosphatidylinositol metabolic process, cellular protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: FORMS APLOID AND BINUCLEATE CELLS 1C (TAIR:AT1G71010.1); Has 3115 Blast hits to 2757 proteins in 368 species: Archae - 419; Bacteria - 0; Metazoa - 983; Fungi - 610; Plants - 538; Viruses - 0; Other Eukaryotes - 565 (source: NCBI BLink). & (gnl|cdd|35451 : 329.0) no description available & (gnl|cdd|48151 : 265.0) no description available & (reliability: 682.0) & (original description: Putative FAB1A, Description = 1-phosphatidylinositol-3-phosphate 5-kinase FAB1, PFAM = PF01504;PF00118)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben101scf10323_93854-106686' '(at1g71010 : 1493.0) Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown.; FORMS APLOID AND BINUCLEATE CELLS 1C (FAB1C); FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: phosphatidylinositol metabolic process, cellular protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT3G14270.1); Has 4961 Blast hits to 4644 proteins in 430 species: Archae - 584; Bacteria - 4; Metazoa - 1658; Fungi - 1043; Plants - 685; Viruses - 0; Other Eukaryotes - 987 (source: NCBI BLink). & (gnl|cdd|35451 : 1303.0) no description available & (gnl|cdd|48151 : 366.0) no description available & (reliability: 2986.0) & (original description: Putative Os06g0259000, Description = Os06g0259000 protein, PFAM = PF00118;PF01504;PF01504)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben101scf10630_192987-267361' '(gnl|cdd|35451 : 415.0) no description available & (at3g14270 : 356.0) Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization.; FORMS APLOID AND BINUCLEATE CELLS 1B (FAB1B); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion binding;1-phosphatidylinositol-3-phosphate 5-kinases (TAIR:AT4G33240.2); Has 8765 Blast hits to 8134 proteins in 458 species: Archae - 587; Bacteria - 13; Metazoa - 3836; Fungi - 1744; Plants - 978; Viruses - 3; Other Eukaryotes - 1604 (source: NCBI BLink). & (reliability: 712.0) & (original description: Putative FAB1A, Description = 1-phosphatidylinositol-3-phosphate 5-kinase FAB1, PFAM = )' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben101scf10630_258148-278917' '(gnl|cdd|35451 : 1455.0) no description available & (at3g14270 : 961.0) Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization.; FORMS APLOID AND BINUCLEATE CELLS 1B (FAB1B); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion binding;1-phosphatidylinositol-3-phosphate 5-kinases (TAIR:AT4G33240.2); Has 8765 Blast hits to 8134 proteins in 458 species: Archae - 587; Bacteria - 13; Metazoa - 3836; Fungi - 1744; Plants - 978; Viruses - 3; Other Eukaryotes - 1604 (source: NCBI BLink). & (gnl|cdd|48151 : 373.0) no description available & (reliability: 1922.0) & (original description: Putative FAB1A, Description = 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A, PFAM = PF01363;PF00118;PF01504)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben101scf12277_222163-226139' '(at1g21920 : 376.0) Histone H3 K4-specific methyltransferase SET7/9 family protein; CONTAINS InterPro DOMAIN/s: MORN motif (InterPro:IPR003409); BEST Arabidopsis thaliana protein match is: Histone H3 K4-specific methyltransferase SET7/9 family protein (TAIR:AT1G77660.1); Has 24355 Blast hits to 6247 proteins in 541 species: Archae - 0; Bacteria - 3533; Metazoa - 3700; Fungi - 215; Plants - 2241; Viruses - 0; Other Eukaryotes - 14666 (source: NCBI BLink). & (gnl|cdd|35452 : 199.0) no description available & (q6ex42|pi5k1_orysa : 107.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (reliability: 752.0) & (original description: Putative BnaC05g17280D, Description = BnaC05g17280D protein, PFAM = PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben101scf12339_25428-36701' '(at3g14270 : 1885.0) Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization.; FORMS APLOID AND BINUCLEATE CELLS 1B (FAB1B); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion binding;1-phosphatidylinositol-3-phosphate 5-kinases (TAIR:AT4G33240.2); Has 8765 Blast hits to 8134 proteins in 458 species: Archae - 587; Bacteria - 13; Metazoa - 3836; Fungi - 1744; Plants - 978; Viruses - 3; Other Eukaryotes - 1604 (source: NCBI BLink). & (gnl|cdd|35451 : 1516.0) no description available & (gnl|cdd|48151 : 379.0) no description available & (reliability: 3770.0) & (original description: Putative FAB1B, Description = 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B, PFAM = PF00118;PF01504;PF01363)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben101scf14010_62974-70810' '(at3g09920 : 1160.0) phosphatidyl inositol monophosphate 5 kinase (PIP5K9); FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: carbohydrate metabolic process, cellular amino acid metabolic process; LOCATED IN: cytosol, nucleus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT1G60890.1). & (q6ex42|pi5k1_orysa : 727.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (gnl|cdd|35450 : 486.0) no description available & (gnl|cdd|47658 : 359.0) no description available & (reliability: 2320.0) & (original description: Putative PIP5K9, Description = Phosphatidylinositol 4-phosphate 5-kinase 9, PFAM = PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF02493;PF01504)' T '30.4.1' 'signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase' 'niben101scf20101_63979-74591' '(at1g71010 : 1544.0) Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown.; FORMS APLOID AND BINUCLEATE CELLS 1C (FAB1C); FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: phosphatidylinositol metabolic process, cellular protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT3G14270.1); Has 4961 Blast hits to 4644 proteins in 430 species: Archae - 584; Bacteria - 4; Metazoa - 1658; Fungi - 1043; Plants - 685; Viruses - 0; Other Eukaryotes - 987 (source: NCBI BLink). & (gnl|cdd|35451 : 1294.0) no description available & (gnl|cdd|48151 : 372.0) no description available & (reliability: 3088.0) & (original description: Putative FAB1C, Description = Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C, PFAM = PF00118;PF01504)' T '30.4.2' 'signalling.phosphinositides.phosphatidylinositol 4-kinase' 'niben101scf01049_485927-488515' '(at1g49340 : 223.0) Encodes a phosphatidylinositol 4-kinase that is expressed in inflorescences and shoots.; ATPI4K ALPHA; FUNCTIONS IN: 1-phosphatidylinositol 4-kinase activity, inositol or phosphatidylinositol kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: shoot, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), Phosphoinositide 3-kinase, accessory (PIK) domain (InterPro:IPR001263), Phosphatidylinositol Kinase (InterPro:IPR015433), Armadillo-type fold (InterPro:IPR016024), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G51040.1); Has 2472 Blast hits to 2328 proteins in 267 species: Archae - 0; Bacteria - 0; Metazoa - 1180; Fungi - 474; Plants - 245; Viruses - 4; Other Eukaryotes - 569 (source: NCBI BLink). & (gnl|cdd|36120 : 163.0) no description available & (reliability: 402.0) & (original description: Putative pi4K1, Description = Phosphatidylinositol 4-kinase alpha, PFAM = )' T '30.4.2' 'signalling.phosphinositides.phosphatidylinositol 4-kinase' 'niben101scf01795_1901621-1914936' '(at5g64070 : 457.0) Encodes a phosphatidylinositol 4-OH kinase, PI-4Kbeta1. Arabidopsis contains 12 PI-4Ks in three separate families: PI-4Kalphs, PI-4kbeta, and PI-4Kgamma. PI-4Kbeta1 is 83% identical to PI-4kbeta2 encoded by At5g09350. Interacts with the RabA4b GTPase. Important for polarized root hair growth as the loss of this gene and its close relative PI-4kbeta2, leads to the formation of abnormal root hairs.; phosphatidylinositol 4-OH kinase beta1 (PI-4KBETA1); FUNCTIONS IN: 1-phosphatidylinositol 4-kinase activity; INVOLVED IN: phosphoinositide biosynthetic process, root hair cell tip growth, pollen tube growth; LOCATED IN: cytosol, nucleus, membrane; EXPRESSED IN: male gametophyte, root hair tip, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), Phosphatidylinositol Kinase (InterPro:IPR015433), Armadillo-type fold (InterPro:IPR016024), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: phosphatidylinositol 4-OH kinase beta2 (TAIR:AT5G09350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36121 : 404.0) no description available & (gnl|cdd|29058 : 356.0) no description available & (p42348|pi3k2_soybn : 96.3) Phosphatidylinositol 3-kinase, nodule isoform (EC 2.7.1.137) (PI3-kinase) (PtdIns-3-kinase) (PI3K) (SPI3K-1) - Glycine max (Soybean) & (reliability: 914.0) & (original description: Putative pi4k1, Description = Phophatdylinositol 4-kinase, PFAM = PF00454)' T '30.4.2' 'signalling.phosphinositides.phosphatidylinositol 4-kinase' 'niben101scf01795_1914207-1918487' '(at5g64070 : 347.0) Encodes a phosphatidylinositol 4-OH kinase, PI-4Kbeta1. Arabidopsis contains 12 PI-4Ks in three separate families: PI-4Kalphs, PI-4kbeta, and PI-4Kgamma. PI-4Kbeta1 is 83% identical to PI-4kbeta2 encoded by At5g09350. Interacts with the RabA4b GTPase. Important for polarized root hair growth as the loss of this gene and its close relative PI-4kbeta2, leads to the formation of abnormal root hairs.; phosphatidylinositol 4-OH kinase beta1 (PI-4KBETA1); FUNCTIONS IN: 1-phosphatidylinositol 4-kinase activity; INVOLVED IN: phosphoinositide biosynthetic process, root hair cell tip growth, pollen tube growth; LOCATED IN: cytosol, nucleus, membrane; EXPRESSED IN: male gametophyte, root hair tip, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), Phosphatidylinositol Kinase (InterPro:IPR015433), Armadillo-type fold (InterPro:IPR016024), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: phosphatidylinositol 4-OH kinase beta2 (TAIR:AT5G09350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36121 : 222.0) no description available & (reliability: 694.0) & (original description: Putative PI4K, Description = Phosphatidylinositol 4-kinase beta 1, PFAM = )' T '30.4.2' 'signalling.phosphinositides.phosphatidylinositol 4-kinase' 'niben101scf04420_116061-152142' '(at5g64070 : 1423.0) Encodes a phosphatidylinositol 4-OH kinase, PI-4Kbeta1. Arabidopsis contains 12 PI-4Ks in three separate families: PI-4Kalphs, PI-4kbeta, and PI-4Kgamma. PI-4Kbeta1 is 83% identical to PI-4kbeta2 encoded by At5g09350. Interacts with the RabA4b GTPase. Important for polarized root hair growth as the loss of this gene and its close relative PI-4kbeta2, leads to the formation of abnormal root hairs.; phosphatidylinositol 4-OH kinase beta1 (PI-4KBETA1); FUNCTIONS IN: 1-phosphatidylinositol 4-kinase activity; INVOLVED IN: phosphoinositide biosynthetic process, root hair cell tip growth, pollen tube growth; LOCATED IN: cytosol, nucleus, membrane; EXPRESSED IN: male gametophyte, root hair tip, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), Phosphatidylinositol Kinase (InterPro:IPR015433), Armadillo-type fold (InterPro:IPR016024), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: phosphatidylinositol 4-OH kinase beta2 (TAIR:AT5G09350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36121 : 816.0) no description available & (gnl|cdd|29058 : 431.0) no description available & (p42348|pi3k2_soybn : 115.0) Phosphatidylinositol 3-kinase, nodule isoform (EC 2.7.1.137) (PI3-kinase) (PtdIns-3-kinase) (PI3K) (SPI3K-1) - Glycine max (Soybean) & (reliability: 2846.0) & (original description: Putative PI4KB1, Description = Phosphatidylinositol 4-kinase beta 1, PFAM = PF00454)' T '30.4.3' 'signalling.phosphinositides.bis(5''-nucleosyl)-tetraphosphatase' 'nbv0.5scaffold4900_46687-54080' '(at1g30110 : 237.0) nudix hydrolase homolog 25 (NUDX25); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 26 (TAIR:AT3G10620.1). & (gnl|cdd|72891 : 154.0) no description available & (reliability: 474.0) & (original description: Putative NUDT25, Description = Nudix hydrolase 25, PFAM = PF00293)' T '30.4.3' 'signalling.phosphinositides.bis(5''-nucleosyl)-tetraphosphatase' 'niben044scf00012901ctg010_1-3845' '(at1g30110 : 142.0) nudix hydrolase homolog 25 (NUDX25); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 26 (TAIR:AT3G10620.1). & (gnl|cdd|72891 : 98.7) no description available & (reliability: 284.0) & (original description: Putative nudH, Description = Nudix hydrolase 26, chloroplastic, PFAM = PF00293)' T '30.4.3' 'signalling.phosphinositides.bis(5''-nucleosyl)-tetraphosphatase' 'niben101scf04845_138457-145850' '(at1g30110 : 281.0) nudix hydrolase homolog 25 (NUDX25); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 26 (TAIR:AT3G10620.1). & (gnl|cdd|72891 : 192.0) no description available & (reliability: 562.0) & (original description: Putative NUDT25, Description = Nudix hydrolase 25, PFAM = PF00293)' T '30.4.3' 'signalling.phosphinositides.bis(5''-nucleosyl)-tetraphosphatase' 'niben101scf08230_71242-77606' '(at3g10620 : 276.0) nudix hydrolase homolog 26 (NUDX26); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 27 (TAIR:AT5G06340.1); Has 4741 Blast hits to 4739 proteins in 1213 species: Archae - 2; Bacteria - 2928; Metazoa - 13; Fungi - 1; Plants - 97; Viruses - 0; Other Eukaryotes - 1700 (source: NCBI BLink). & (gnl|cdd|72891 : 196.0) no description available & (reliability: 552.0) & (original description: Putative NUDT26, Description = Nudix hydrolase 26, chloroplastic, PFAM = PF00293)' T '30.4.4' 'signalling.phosphinositides.phosphoinositide phospholipase C' 'nbv0.3scaffold25983_9894-20258' '(at5g58700 : 746.0) phosphatidylinositol-speciwc phospholipase C4 (PLC4); FUNCTIONS IN: phosphoinositide phospholipase C activity, phospholipase C activity, phosphoric diester hydrolase activity; INVOLVED IN: signal transduction, intracellular signaling pathway, lipid metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase C, phosphoinositol-specific (InterPro:IPR001192), Phospholipase C, phosphatidylinositol-specific, Y domain (InterPro:IPR001711), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Phosphoinositide-specific phospholipase C family protein (TAIR:AT2G40116.1); Has 2441 Blast hits to 1951 proteins in 262 species: Archae - 0; Bacteria - 0; Metazoa - 1601; Fungi - 365; Plants - 252; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (gnl|cdd|35390 : 686.0) no description available & (gnl|cdd|73182 : 187.0) no description available & (reliability: 1492.0) & (original description: Putative plc3, Description = Phosphoinositide phospholipase C, PFAM = PF00168;PF00387;PF00388)' T '30.4.4' 'signalling.phosphinositides.phosphoinositide phospholipase C' 'nbv0.5scaffold271_365716-743124' '(at2g40116 : 415.0) Phosphoinositide-specific phospholipase C family protein; FUNCTIONS IN: phospholipase C activity, phosphoinositide phospholipase C activity, phosphoric diester hydrolase activity; INVOLVED IN: signal transduction, intracellular signaling pathway, lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphoinositol-specific, EF-hand-like (InterPro:IPR015359), Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase C, phosphoinositol-specific (InterPro:IPR001192), C2 calcium-dependent membrane targeting (InterPro:IPR000008), Phospholipase C, phosphatidylinositol-specific, Y domain (InterPro:IPR001711); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-speciwc phospholipase C4 (TAIR:AT5G58700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35390 : 352.0) no description available & (gnl|cdd|73182 : 178.0) no description available & (reliability: 830.0) & (original description: Putative plc1, Description = Phosphoinositide phospholipase C, PFAM = PF00388;PF09279;PF00168;PF00387)' T '30.4.4' 'signalling.phosphinositides.phosphoinositide phospholipase C' 'nbv0.5scaffold850_530377-537411' '(at5g58670 : 525.0) phosphatidylinositol-specific phospholipase C is induced to a significant extent under various environmental stresses, such as dehydration, salinity, and low temperature. May play a role in secondary ABA response. There are two genes called ATPLC1, one corresponding to AT4g38530 and one corresponding ot AT5g58670 (this one).; phospholipase C1 (PLC1); CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphoinositol-specific, EF-hand-like (InterPro:IPR015359), Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), EF-Hand 1, calcium-binding site (InterPro:IPR018247), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase C, phosphoinositol-specific (InterPro:IPR001192), Phospholipase C, phosphatidylinositol-specific, Y domain (InterPro:IPR001711), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase C1 (TAIR:AT4G38530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35390 : 512.0) no description available & (gnl|cdd|73182 : 195.0) no description available & (reliability: 1050.0) & (original description: Putative plc3, Description = Phosphoinositide phospholipase C, PFAM = PF00388;PF00387;PF09279;PF00168)' T '30.4.4' 'signalling.phosphinositides.phosphoinositide phospholipase C' 'niben044scf00047373ctg003_1-6443' '(at3g08510 : 603.0) Phosphoinositide-specific phospholipase C (PI-PLC), catalyzes hydrolysis of phosphatidylinositol 4,5-bisphosphate into inositol 1,4,5-trisphosphate and diacylglycerol.; phospholipase C 2; FUNCTIONS IN: phospholipase C activity; INVOLVED IN: signal transduction, intracellular signaling pathway, lipid metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphoinositol-specific, EF-hand-like (InterPro:IPR015359), Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase C, phosphoinositol-specific (InterPro:IPR001192), Phospholipase C, phosphatidylinositol-specific, Y domain (InterPro:IPR001711), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Phosphoinositide-specific phospholipase C family protein (TAIR:AT3G55940.1); Has 2455 Blast hits to 1965 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 1631; Fungi - 365; Plants - 250; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink). & (gnl|cdd|35390 : 510.0) no description available & (gnl|cdd|73182 : 215.0) no description available & (reliability: 1206.0) & (original description: Putative PLC2, Description = Phosphoinositide phospholipase C, PFAM = PF00388;PF00168;PF00387)' T '30.4.4' 'signalling.phosphinositides.phosphoinositide phospholipase C' 'niben101scf00318_283016-289618' '(at2g40116 : 753.0) Phosphoinositide-specific phospholipase C family protein; FUNCTIONS IN: phospholipase C activity, phosphoinositide phospholipase C activity, phosphoric diester hydrolase activity; INVOLVED IN: signal transduction, intracellular signaling pathway, lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphoinositol-specific, EF-hand-like (InterPro:IPR015359), Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase C, phosphoinositol-specific (InterPro:IPR001192), C2 calcium-dependent membrane targeting (InterPro:IPR000008), Phospholipase C, phosphatidylinositol-specific, Y domain (InterPro:IPR001711); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-speciwc phospholipase C4 (TAIR:AT5G58700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35390 : 667.0) no description available & (gnl|cdd|73182 : 182.0) no description available & (reliability: 1506.0) & (original description: Putative PLC6, Description = Phosphoinositide phospholipase C 6, PFAM = PF00388;PF00168;PF00387;PF09279)' T '30.4.4' 'signalling.phosphinositides.phosphoinositide phospholipase C' 'niben101scf00573_495947-503559' '(at5g58670 : 570.0) phosphatidylinositol-specific phospholipase C is induced to a significant extent under various environmental stresses, such as dehydration, salinity, and low temperature. May play a role in secondary ABA response. There are two genes called ATPLC1, one corresponding to AT4g38530 and one corresponding ot AT5g58670 (this one).; phospholipase C1 (PLC1); CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphoinositol-specific, EF-hand-like (InterPro:IPR015359), Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), EF-Hand 1, calcium-binding site (InterPro:IPR018247), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase C, phosphoinositol-specific (InterPro:IPR001192), Phospholipase C, phosphatidylinositol-specific, Y domain (InterPro:IPR001711), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase C1 (TAIR:AT4G38530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35390 : 561.0) no description available & (gnl|cdd|73182 : 237.0) no description available & (reliability: 1140.0) & (original description: Putative plc, Description = Phosphoinositide phospholipase C, PFAM = PF09279;PF00387;PF00388;PF00168)' T '30.4.4' 'signalling.phosphinositides.phosphoinositide phospholipase C' 'niben101scf01802_78941-84623' '(at4g36945 : 470.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phospholipase C activity, phosphoric diester hydrolase activity; INVOLVED IN: intracellular signaling pathway, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT3G19310.1); Has 486 Blast hits to 483 proteins in 111 species: Archae - 0; Bacteria - 90; Metazoa - 8; Fungi - 169; Plants - 156; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 940.0) & (original description: Putative LjNUF, Description = Putative uncharacterized protein LjNUF, PFAM = )' T '30.4.4' 'signalling.phosphinositides.phosphoinositide phospholipase C' 'niben101scf02221_17038-26607' '(at3g08510 : 728.0) Phosphoinositide-specific phospholipase C (PI-PLC), catalyzes hydrolysis of phosphatidylinositol 4,5-bisphosphate into inositol 1,4,5-trisphosphate and diacylglycerol.; phospholipase C 2; FUNCTIONS IN: phospholipase C activity; INVOLVED IN: signal transduction, intracellular signaling pathway, lipid metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphoinositol-specific, EF-hand-like (InterPro:IPR015359), Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase C, phosphoinositol-specific (InterPro:IPR001192), Phospholipase C, phosphatidylinositol-specific, Y domain (InterPro:IPR001711), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Phosphoinositide-specific phospholipase C family protein (TAIR:AT3G55940.1); Has 2455 Blast hits to 1965 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 1631; Fungi - 365; Plants - 250; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink). & (gnl|cdd|35390 : 672.0) no description available & (gnl|cdd|73182 : 238.0) no description available & (reliability: 1456.0) & (original description: Putative plc3, Description = Phosphoinositide phospholipase C, PFAM = PF00388;PF00387;PF00168;PF09279)' T '30.4.4' 'signalling.phosphinositides.phosphoinositide phospholipase C' 'niben101scf02280_192658-202113' '(at3g08510 : 809.0) Phosphoinositide-specific phospholipase C (PI-PLC), catalyzes hydrolysis of phosphatidylinositol 4,5-bisphosphate into inositol 1,4,5-trisphosphate and diacylglycerol.; phospholipase C 2; FUNCTIONS IN: phospholipase C activity; INVOLVED IN: signal transduction, intracellular signaling pathway, lipid metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphoinositol-specific, EF-hand-like (InterPro:IPR015359), Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase C, phosphoinositol-specific (InterPro:IPR001192), Phospholipase C, phosphatidylinositol-specific, Y domain (InterPro:IPR001711), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Phosphoinositide-specific phospholipase C family protein (TAIR:AT3G55940.1); Has 2455 Blast hits to 1965 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 1631; Fungi - 365; Plants - 250; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink). & (gnl|cdd|35390 : 664.0) no description available & (gnl|cdd|73182 : 173.0) no description available & (reliability: 1618.0) & (original description: Putative plc3, Description = Phosphoinositide phospholipase C, PFAM = PF00387;PF00168;PF00388;PF09279)' T '30.4.4' 'signalling.phosphinositides.phosphoinositide phospholipase C' 'niben101scf04003_399289-409493' '(at4g36945 : 471.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phospholipase C activity, phosphoric diester hydrolase activity; INVOLVED IN: intracellular signaling pathway, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT3G19310.1); Has 486 Blast hits to 483 proteins in 111 species: Archae - 0; Bacteria - 90; Metazoa - 8; Fungi - 169; Plants - 156; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 942.0) & (original description: Putative LjNUF, Description = Putative uncharacterized protein LjNUF, PFAM = )' T '30.4.4' 'signalling.phosphinositides.phosphoinositide phospholipase C' 'niben101scf04093_72946-81162' '(at3g08510 : 580.0) Phosphoinositide-specific phospholipase C (PI-PLC), catalyzes hydrolysis of phosphatidylinositol 4,5-bisphosphate into inositol 1,4,5-trisphosphate and diacylglycerol.; phospholipase C 2; FUNCTIONS IN: phospholipase C activity; INVOLVED IN: signal transduction, intracellular signaling pathway, lipid metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphoinositol-specific, EF-hand-like (InterPro:IPR015359), Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase C, phosphoinositol-specific (InterPro:IPR001192), Phospholipase C, phosphatidylinositol-specific, Y domain (InterPro:IPR001711), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Phosphoinositide-specific phospholipase C family protein (TAIR:AT3G55940.1); Has 2455 Blast hits to 1965 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 1631; Fungi - 365; Plants - 250; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink). & (gnl|cdd|35390 : 500.0) no description available & (gnl|cdd|73182 : 173.0) no description available & (reliability: 1160.0) & (original description: Putative plc, Description = Phosphoinositide phospholipase C, PFAM = PF00168;PF00387;PF00388)' T '30.4.4' 'signalling.phosphinositides.phosphoinositide phospholipase C' 'niben101scf05954_200754-211149' '(at2g40116 : 429.0) Phosphoinositide-specific phospholipase C family protein; FUNCTIONS IN: phospholipase C activity, phosphoinositide phospholipase C activity, phosphoric diester hydrolase activity; INVOLVED IN: signal transduction, intracellular signaling pathway, lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphoinositol-specific, EF-hand-like (InterPro:IPR015359), Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase C, phosphoinositol-specific (InterPro:IPR001192), C2 calcium-dependent membrane targeting (InterPro:IPR000008), Phospholipase C, phosphatidylinositol-specific, Y domain (InterPro:IPR001711); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-speciwc phospholipase C4 (TAIR:AT5G58700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35390 : 362.0) no description available & (gnl|cdd|73182 : 179.0) no description available & (reliability: 858.0) & (original description: Putative plc1, Description = Phosphoinositide phospholipase C, PFAM = PF00168;PF09279;PF00387;PF00388)' T '30.4.4' 'signalling.phosphinositides.phosphoinositide phospholipase C' 'niben101scf11417_55757-64765' '(at5g58700 : 766.0) phosphatidylinositol-speciwc phospholipase C4 (PLC4); FUNCTIONS IN: phosphoinositide phospholipase C activity, phospholipase C activity, phosphoric diester hydrolase activity; INVOLVED IN: signal transduction, intracellular signaling pathway, lipid metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase C, phosphoinositol-specific (InterPro:IPR001192), Phospholipase C, phosphatidylinositol-specific, Y domain (InterPro:IPR001711), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Phosphoinositide-specific phospholipase C family protein (TAIR:AT2G40116.1); Has 2441 Blast hits to 1951 proteins in 262 species: Archae - 0; Bacteria - 0; Metazoa - 1601; Fungi - 365; Plants - 252; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (gnl|cdd|35390 : 690.0) no description available & (gnl|cdd|73182 : 186.0) no description available & (reliability: 1532.0) & (original description: Putative plc3, Description = Phosphoinositide phospholipase C, PFAM = PF00388;PF00387;PF00168)' T '30.4.5' 'signalling.phosphinositides.inositol-1,3,4-trisphosphate 5/6-kinase' 'nbv0.3scaffold27121_1-13864' '(at2g43980 : 186.0) "inositol 1,3,4-trisphosphate 5/6-kinase 4" (ITPK4); FUNCTIONS IN: magnesium ion binding, inositol-1,3,4-trisphosphate 5/6-kinase activity, catalytic activity, ATP binding, inositol tetrakisphosphate 1-kinase activity; INVOLVED IN: inositol trisphosphate metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol-tetrakisphosphate 1-kinase, uncharacterised-N-terminal (InterPro:IPR017418), Inositol 1, 3, 4-trisphosphate 56-kinase (InterPro:IPR008656); BEST Arabidopsis thaliana protein match is: Inositol 1,3,4-trisphosphate 5/6-kinase family protein (TAIR:AT4G08170.2); Has 388 Blast hits to 384 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 95; Fungi - 0; Plants - 245; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative PGSC0003DMG400025215, Description = Inositol-tetrakisphosphate 1-kinase, PFAM = PF05770)' T '30.4.5' 'signalling.phosphinositides.inositol-1,3,4-trisphosphate 5/6-kinase' 'nbv0.3scaffold27121_701-13964' '(at2g43980 : 157.0) "inositol 1,3,4-trisphosphate 5/6-kinase 4" (ITPK4); FUNCTIONS IN: magnesium ion binding, inositol-1,3,4-trisphosphate 5/6-kinase activity, catalytic activity, ATP binding, inositol tetrakisphosphate 1-kinase activity; INVOLVED IN: inositol trisphosphate metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol-tetrakisphosphate 1-kinase, uncharacterised-N-terminal (InterPro:IPR017418), Inositol 1, 3, 4-trisphosphate 56-kinase (InterPro:IPR008656); BEST Arabidopsis thaliana protein match is: Inositol 1,3,4-trisphosphate 5/6-kinase family protein (TAIR:AT4G08170.2); Has 388 Blast hits to 384 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 95; Fungi - 0; Plants - 245; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative PGSC0003DMG400025215, Description = Inositol-tetrakisphosphate 1-kinase, PFAM = PF05770)' T '30.4.5' 'signalling.phosphinositides.inositol-1,3,4-trisphosphate 5/6-kinase' 'nbv0.5scaffold141_725891-742136' '(at2g43980 : 384.0) "inositol 1,3,4-trisphosphate 5/6-kinase 4" (ITPK4); FUNCTIONS IN: magnesium ion binding, inositol-1,3,4-trisphosphate 5/6-kinase activity, catalytic activity, ATP binding, inositol tetrakisphosphate 1-kinase activity; INVOLVED IN: inositol trisphosphate metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol-tetrakisphosphate 1-kinase, uncharacterised-N-terminal (InterPro:IPR017418), Inositol 1, 3, 4-trisphosphate 56-kinase (InterPro:IPR008656); BEST Arabidopsis thaliana protein match is: Inositol 1,3,4-trisphosphate 5/6-kinase family protein (TAIR:AT4G08170.2); Has 388 Blast hits to 384 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 95; Fungi - 0; Plants - 245; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|86947 : 123.0) no description available & (q84y01|itpk1_maize : 95.9) Inositol-tetrakisphosphate 1-kinase 1 (EC 2.7.1.134) (Inositol-triphosphate 5/6-kinase 1) (EC 2.7.1.159) (Inositol 1,3,4-trisphosphate 5/6-kinase 1) (Ins(1,3,4)P(3) 5/6-kinase 1) (ZmIpk) (Low phytic acid protein 2) - Zea mays (Maize) & (reliability: 768.0) & (original description: Putative ITPK, Description = Putative inositol 1,3,4-trisphosphate 5/6-kinase family protein, PFAM = PF05770)' T '30.4.5' 'signalling.phosphinositides.inositol-1,3,4-trisphosphate 5/6-kinase' 'nbv0.5scaffold7878_44072-47154' '(q84y01|itpk1_maize : 391.0) Inositol-tetrakisphosphate 1-kinase 1 (EC 2.7.1.134) (Inositol-triphosphate 5/6-kinase 1) (EC 2.7.1.159) (Inositol 1,3,4-trisphosphate 5/6-kinase 1) (Ins(1,3,4)P(3) 5/6-kinase 1) (ZmIpk) (Low phytic acid protein 2) - Zea mays (Maize) & (gnl|cdd|86947 : 382.0) no description available & (at5g16760 : 363.0) Encodes a inositol 1,3,4-trisphosphate 5/6-kinase.; Inositol 1,3,4-trisphosphate 5/6-kinase family protein; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, catalytic activity; INVOLVED IN: inositol and derivative phosphorylation; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Inositol-tetrakisphosphate 1-kinase (InterPro:IPR017427), ATP-grasp fold (InterPro:IPR011761), Inositol 1, 3, 4-trisphosphate 56-kinase (InterPro:IPR008656); BEST Arabidopsis thaliana protein match is: Inositol 1,3,4-trisphosphate 5/6-kinase family protein (TAIR:AT4G08170.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 726.0) & (original description: Putative ipka, Description = Inositol-tetrakisphosphate 1-kinase, PFAM = PF05770)' T '30.4.5' 'signalling.phosphinositides.inositol-1,3,4-trisphosphate 5/6-kinase' 'niben101scf00168_494325-525155' '(at2g43980 : 460.0) "inositol 1,3,4-trisphosphate 5/6-kinase 4" (ITPK4); FUNCTIONS IN: magnesium ion binding, inositol-1,3,4-trisphosphate 5/6-kinase activity, catalytic activity, ATP binding, inositol tetrakisphosphate 1-kinase activity; INVOLVED IN: inositol trisphosphate metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol-tetrakisphosphate 1-kinase, uncharacterised-N-terminal (InterPro:IPR017418), Inositol 1, 3, 4-trisphosphate 56-kinase (InterPro:IPR008656); BEST Arabidopsis thaliana protein match is: Inositol 1,3,4-trisphosphate 5/6-kinase family protein (TAIR:AT4G08170.2); Has 388 Blast hits to 384 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 95; Fungi - 0; Plants - 245; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|86947 : 124.0) no description available & (q84y01|itpk1_maize : 97.1) Inositol-tetrakisphosphate 1-kinase 1 (EC 2.7.1.134) (Inositol-triphosphate 5/6-kinase 1) (EC 2.7.1.159) (Inositol 1,3,4-trisphosphate 5/6-kinase 1) (Ins(1,3,4)P(3) 5/6-kinase 1) (ZmIpk) (Low phytic acid protein 2) - Zea mays (Maize) & (reliability: 920.0) & (original description: Putative ITPK4, Description = Inositol 1,3,4-trisphosphate 5/6-kinase 4, PFAM = PF05770)' T '30.4.5' 'signalling.phosphinositides.inositol-1,3,4-trisphosphate 5/6-kinase' 'niben101scf02249_543171-546121' '(gnl|cdd|86947 : 375.0) no description available & (at5g16760 : 333.0) Encodes a inositol 1,3,4-trisphosphate 5/6-kinase.; Inositol 1,3,4-trisphosphate 5/6-kinase family protein; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, catalytic activity; INVOLVED IN: inositol and derivative phosphorylation; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Inositol-tetrakisphosphate 1-kinase (InterPro:IPR017427), ATP-grasp fold (InterPro:IPR011761), Inositol 1, 3, 4-trisphosphate 56-kinase (InterPro:IPR008656); BEST Arabidopsis thaliana protein match is: Inositol 1,3,4-trisphosphate 5/6-kinase family protein (TAIR:AT4G08170.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q84y01|itpk1_maize : 331.0) Inositol-tetrakisphosphate 1-kinase 1 (EC 2.7.1.134) (Inositol-triphosphate 5/6-kinase 1) (EC 2.7.1.159) (Inositol 1,3,4-trisphosphate 5/6-kinase 1) (Ins(1,3,4)P(3) 5/6-kinase 1) (ZmIpk) (Low phytic acid protein 2) - Zea mays (Maize) & (reliability: 666.0) & (original description: Putative ipka, Description = Inositol-tetrakisphosphate 1-kinase, PFAM = PF05770)' T '30.4.5' 'signalling.phosphinositides.inositol-1,3,4-trisphosphate 5/6-kinase' 'niben101scf02348_1105514-1115020' '(gnl|cdd|86947 : 428.0) no description available & (at4g08170 : 375.0) Inositol 1,3,4-trisphosphate 5/6-kinase family protein; FUNCTIONS IN: magnesium ion binding, inositol-1,3,4-trisphosphate 5/6-kinase activity, catalytic activity, ATP binding, inositol tetrakisphosphate 1-kinase activity; INVOLVED IN: response to wounding; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATP-grasp fold (InterPro:IPR011761), Inositol 1, 3, 4-trisphosphate 56-kinase (InterPro:IPR008656); BEST Arabidopsis thaliana protein match is: Inositol 1,3,4-trisphosphate 5/6-kinase family protein (TAIR:AT4G33770.1). & (q84y01|itpk1_maize : 207.0) Inositol-tetrakisphosphate 1-kinase 1 (EC 2.7.1.134) (Inositol-triphosphate 5/6-kinase 1) (EC 2.7.1.159) (Inositol 1,3,4-trisphosphate 5/6-kinase 1) (Ins(1,3,4)P(3) 5/6-kinase 1) (ZmIpk) (Low phytic acid protein 2) - Zea mays (Maize) & (reliability: 750.0) & (original description: Putative ipK3, Description = Inositol-tetrakisphosphate 1-kinase, PFAM = PF05770)' T '30.4.5' 'signalling.phosphinositides.inositol-1,3,4-trisphosphate 5/6-kinase' 'niben101scf02375_139703-149837' '(gnl|cdd|86947 : 409.0) no description available & (at4g08170 : 399.0) Inositol 1,3,4-trisphosphate 5/6-kinase family protein; FUNCTIONS IN: magnesium ion binding, inositol-1,3,4-trisphosphate 5/6-kinase activity, catalytic activity, ATP binding, inositol tetrakisphosphate 1-kinase activity; INVOLVED IN: response to wounding; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATP-grasp fold (InterPro:IPR011761), Inositol 1, 3, 4-trisphosphate 56-kinase (InterPro:IPR008656); BEST Arabidopsis thaliana protein match is: Inositol 1,3,4-trisphosphate 5/6-kinase family protein (TAIR:AT4G33770.1). & (q84y01|itpk1_maize : 212.0) Inositol-tetrakisphosphate 1-kinase 1 (EC 2.7.1.134) (Inositol-triphosphate 5/6-kinase 1) (EC 2.7.1.159) (Inositol 1,3,4-trisphosphate 5/6-kinase 1) (Ins(1,3,4)P(3) 5/6-kinase 1) (ZmIpk) (Low phytic acid protein 2) - Zea mays (Maize) & (reliability: 798.0) & (original description: Putative ipK3, Description = Inositol-tetrakisphosphate 1-kinase, PFAM = PF05770)' T '30.4.5' 'signalling.phosphinositides.inositol-1,3,4-trisphosphate 5/6-kinase' 'niben101scf02564_897203-912882' '(at4g08170 : 463.0) Inositol 1,3,4-trisphosphate 5/6-kinase family protein; FUNCTIONS IN: magnesium ion binding, inositol-1,3,4-trisphosphate 5/6-kinase activity, catalytic activity, ATP binding, inositol tetrakisphosphate 1-kinase activity; INVOLVED IN: response to wounding; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATP-grasp fold (InterPro:IPR011761), Inositol 1, 3, 4-trisphosphate 56-kinase (InterPro:IPR008656); BEST Arabidopsis thaliana protein match is: Inositol 1,3,4-trisphosphate 5/6-kinase family protein (TAIR:AT4G33770.1). & (gnl|cdd|86947 : 424.0) no description available & (q84y01|itpk1_maize : 254.0) Inositol-tetrakisphosphate 1-kinase 1 (EC 2.7.1.134) (Inositol-triphosphate 5/6-kinase 1) (EC 2.7.1.159) (Inositol 1,3,4-trisphosphate 5/6-kinase 1) (Ins(1,3,4)P(3) 5/6-kinase 1) (ZmIpk) (Low phytic acid protein 2) - Zea mays (Maize) & (reliability: 926.0) & (original description: Putative ITPK3, Description = Inositol-tetrakisphosphate 1-kinase 3, PFAM = PF05770)' T '30.4.5' 'signalling.phosphinositides.inositol-1,3,4-trisphosphate 5/6-kinase' 'niben101scf05998_130226-133308' '(q84y01|itpk1_maize : 391.0) Inositol-tetrakisphosphate 1-kinase 1 (EC 2.7.1.134) (Inositol-triphosphate 5/6-kinase 1) (EC 2.7.1.159) (Inositol 1,3,4-trisphosphate 5/6-kinase 1) (Ins(1,3,4)P(3) 5/6-kinase 1) (ZmIpk) (Low phytic acid protein 2) - Zea mays (Maize) & (gnl|cdd|86947 : 386.0) no description available & (at5g16760 : 367.0) Encodes a inositol 1,3,4-trisphosphate 5/6-kinase.; Inositol 1,3,4-trisphosphate 5/6-kinase family protein; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, catalytic activity; INVOLVED IN: inositol and derivative phosphorylation; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Inositol-tetrakisphosphate 1-kinase (InterPro:IPR017427), ATP-grasp fold (InterPro:IPR011761), Inositol 1, 3, 4-trisphosphate 56-kinase (InterPro:IPR008656); BEST Arabidopsis thaliana protein match is: Inositol 1,3,4-trisphosphate 5/6-kinase family protein (TAIR:AT4G08170.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 734.0) & (original description: Putative ipka, Description = Inositol-tetrakisphosphate 1-kinase, PFAM = PF05770)' T '30.4.5' 'signalling.phosphinositides.inositol-1,3,4-trisphosphate 5/6-kinase' 'niben101scf10781_295515-303858' '(gnl|cdd|86947 : 428.0) no description available & (at4g08170 : 380.0) Inositol 1,3,4-trisphosphate 5/6-kinase family protein; FUNCTIONS IN: magnesium ion binding, inositol-1,3,4-trisphosphate 5/6-kinase activity, catalytic activity, ATP binding, inositol tetrakisphosphate 1-kinase activity; INVOLVED IN: response to wounding; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATP-grasp fold (InterPro:IPR011761), Inositol 1, 3, 4-trisphosphate 56-kinase (InterPro:IPR008656); BEST Arabidopsis thaliana protein match is: Inositol 1,3,4-trisphosphate 5/6-kinase family protein (TAIR:AT4G33770.1). & (q84y01|itpk1_maize : 207.0) Inositol-tetrakisphosphate 1-kinase 1 (EC 2.7.1.134) (Inositol-triphosphate 5/6-kinase 1) (EC 2.7.1.159) (Inositol 1,3,4-trisphosphate 5/6-kinase 1) (Ins(1,3,4)P(3) 5/6-kinase 1) (ZmIpk) (Low phytic acid protein 2) - Zea mays (Maize) & (reliability: 760.0) & (original description: Putative ITPK3, Description = Inositol-tetrakisphosphate 1-kinase 3, PFAM = PF05770)' T '30.4.5' 'signalling.phosphinositides.inositol-1,3,4-trisphosphate 5/6-kinase' 'niben101scf13742_15668-18714' '(gnl|cdd|86947 : 343.0) no description available & (q84y01|itpk1_maize : 301.0) Inositol-tetrakisphosphate 1-kinase 1 (EC 2.7.1.134) (Inositol-triphosphate 5/6-kinase 1) (EC 2.7.1.159) (Inositol 1,3,4-trisphosphate 5/6-kinase 1) (Ins(1,3,4)P(3) 5/6-kinase 1) (ZmIpk) (Low phytic acid protein 2) - Zea mays (Maize) & (at5g16760 : 300.0) Encodes a inositol 1,3,4-trisphosphate 5/6-kinase.; Inositol 1,3,4-trisphosphate 5/6-kinase family protein; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, catalytic activity; INVOLVED IN: inositol and derivative phosphorylation; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Inositol-tetrakisphosphate 1-kinase (InterPro:IPR017427), ATP-grasp fold (InterPro:IPR011761), Inositol 1, 3, 4-trisphosphate 56-kinase (InterPro:IPR008656); BEST Arabidopsis thaliana protein match is: Inositol 1,3,4-trisphosphate 5/6-kinase family protein (TAIR:AT4G08170.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 600.0) & (original description: Putative ipka, Description = Inositol-tetrakisphosphate 1-kinase, PFAM = PF05770)' T '30.4.6' 'signaling.phosphinositides.phosphatidylinositol-4,5-bisphosphate 3-kinase' '' '' '30.4.7' 'signaling.phosphinositides.phosphatidylinositol-4-phosphate 3-kinase' '' '' '30.4.8' 'signaling.phosphinositides.phosphatidylinositol phosphatidylinositol 3-kinase' '' '' '30.5' 'signalling.G-proteins' 'nbv0.3scaffold1404_92108-95386' '(at4g28950 : 346.0) A member of ROP GTPase gene family.; RHO-related protein from plants 9 (ROP9); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Ras small GTPase, Ras type (InterPro:IPR003577), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RHO-related protein from plants 10 (TAIR:AT3G48040.1); Has 24641 Blast hits to 24616 proteins in 674 species: Archae - 9; Bacteria - 56; Metazoa - 12738; Fungi - 3855; Plants - 2680; Viruses - 20; Other Eukaryotes - 5283 (source: NCBI BLink). & (q68y52|rac2_orysa : 342.0) Rac-like GTP-binding protein 2 (OsRac2) - Oryza sativa (Rice) & (gnl|cdd|58016 : 326.0) no description available & (gnl|cdd|35614 : 279.0) no description available & (reliability: 692.0) & (original description: Putative rac1, Description = Putative rac protein, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold1466_88789-93229' '(at3g62560 : 332.0) Ras-related small GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: secretion-associated RAS super family 2 (TAIR:AT4G02080.1); Has 6828 Blast hits to 6826 proteins in 379 species: Archae - 2; Bacteria - 48; Metazoa - 3250; Fungi - 1258; Plants - 1101; Viruses - 0; Other Eukaryotes - 1169 (source: NCBI BLink). & (gnl|cdd|35300 : 332.0) no description available & (o04266|sar1a_bracm : 328.0) GTP-binding protein SAR1A - Brassica campestris (Field mustard) & (gnl|cdd|57938 : 327.0) no description available & (reliability: 664.0) & (original description: Putative SAR2, Description = GTP-binding protein SAR2, PFAM = PF00025)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold2199_1-2952' '(at3g15680 : 139.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT5G25490.1); Has 1825 Blast hits to 997 proteins in 170 species: Archae - 0; Bacteria - 2; Metazoa - 978; Fungi - 140; Plants - 475; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|39399 : 112.0) no description available & (reliability: 278.0) & (original description: Putative At3g15680, Description = At3g15680, PFAM = PF00641;PF00641;PF00641)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold3002_51748-73892' '(gnl|cdd|81586 : 1085.0) no description available & (at5g08650 : 1048.0) Small GTP-binding protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), GTP-binding protein LepA, C-terminal (InterPro:IPR013842), Protein synthesis factor, GTP-binding (InterPro:IPR000795), GTP-binding protein LepA (InterPro:IPR006297), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Small GTP-binding protein (TAIR:AT5G39900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35683 : 847.0) no description available & (q9fe64|efgm_orysa : 96.3) Elongation factor G, mitochondrial precursor (mEF-G) - Oryza sativa (Rice) & (reliability: 2096.0) & (original description: Putative lepA, Description = EF-4, PFAM = PF00009;PF03144;PF00679;PF06421)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold4222_5872-7890' '(at5g56230 : 145.0) prenylated RAB acceptor 1.G2 (PRA1.G2); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: prenylated RAB acceptor 1.G1 (TAIR:AT1G55640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38352 : 143.0) no description available & (gnl|cdd|86276 : 111.0) no description available & (reliability: 290.0) & (original description: Putative PRA1G2, Description = AtPRA1.G2, PFAM = PF03208)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold9731_43966-52099' '(at5g15930 : 496.0) Encodes a putative plant adhesion molecule.; plant adhesion molecule 1 (PAM1); FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT3G02460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36318 : 231.0) no description available & (gnl|cdd|34807 : 187.0) no description available & (reliability: 978.0) & (original description: Putative PAM1, Description = Plant adhesion molecule 1, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold9848_38596-47054' '(gnl|cdd|35300 : 329.0) no description available & (gnl|cdd|57938 : 328.0) no description available & (at4g02080 : 299.0) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.; secretion-associated RAS super family 2 (SAR2); FUNCTIONS IN: GTP binding; INVOLVED IN: intracellular protein transport; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT3G62560.1); Has 6784 Blast hits to 6782 proteins in 374 species: Archae - 2; Bacteria - 40; Metazoa - 3245; Fungi - 1245; Plants - 1081; Viruses - 0; Other Eukaryotes - 1171 (source: NCBI BLink). & (o04266|sar1a_bracm : 294.0) GTP-binding protein SAR1A - Brassica campestris (Field mustard) & (reliability: 598.0) & (original description: Putative sar1, Description = Small COPII coat GTPase SAR1, PFAM = PF00025)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold10074_20220-25470' '(p93397|gbb1_tobac : 757.0) Guanine nucleotide-binding protein subunit beta 1 - Nicotiana tabacum (Common tobacco) & (at4g34460 : 597.0) Encodes the heterotrimeric G-protein beta subunit and is involved in organ shape. A significant fraction of the protein is found in the ER. Mutants carrying null alleles express similar fruit phenotypes, as seen in er plants, but differ from er in that the stem is only slightly shorter than that in the wild type, the pedicel is slightly longer than that in the wild type, and the leaves are rounder than those in er mutants. Gene is expressed in all tissues examined, with highest expression level found in siliques. It is involved in resistance to Plectosphaerella cucumerina. The predicted protein has two DWD motifs. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase; GTP binding protein beta 1 (AGB1); FUNCTIONS IN: protein binding, GTPase activity, nucleotide binding; INVOLVED IN: in 11 processes; LOCATED IN: endoplasmic reticulum, plasma membrane, CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), Guanine nucleotide-binding protein, beta subunit (InterPro:IPR016346), WD40 repeat (InterPro:IPR001680), G-protein, beta subunit (InterPro:IPR001632), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein (TAIR:AT5G67320.1); Has 59918 Blast hits to 28704 proteins in 832 species: Archae - 54; Bacteria - 8355; Metazoa - 23550; Fungi - 12390; Plants - 7677; Viruses - 0; Other Eukaryotes - 7892 (source: NCBI BLink). & (gnl|cdd|35507 : 432.0) no description available & (gnl|cdd|29257 : 212.0) no description available & (reliability: 1194.0) & (original description: Putative gb1, Description = Guanine nucleotide-binding protein subunit beta, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold10657_7443-13059' '(at4g17170 : 377.0) member of RAB gene family; RAB GTPase homolog B1C (RABB1C); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: ER to Golgi vesicle-mediated transport, pollen sperm cell differentiation, cell growth; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: GTP-binding 2 (TAIR:AT4G35860.1); Has 27116 Blast hits to 27043 proteins in 734 species: Archae - 17; Bacteria - 131; Metazoa - 14131; Fungi - 4055; Plants - 2966; Viruses - 20; Other Eukaryotes - 5796 (source: NCBI BLink). & (p49104|rab2b_maize : 368.0) Ras-related protein Rab-2-B - Zea mays (Maize) & (gnl|cdd|35321 : 357.0) no description available & (gnl|cdd|57952 : 337.0) no description available & (reliability: 754.0) & (original description: Putative RABB1C, Description = Ras-related protein RABB1c, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold11879_17050-23003' '(at5g22400 : 422.0) Rho GTPase activating protein with PAK-box/P21-Rho-binding domain; FUNCTIONS IN: Rac GTPase activator activity; INVOLVED IN: signal transduction; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095), Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198); BEST Arabidopsis thaliana protein match is: rac GTPase activating protein (TAIR:AT3G11490.1); Has 3977 Blast hits to 3976 proteins in 184 species: Archae - 0; Bacteria - 0; Metazoa - 2927; Fungi - 443; Plants - 206; Viruses - 0; Other Eukaryotes - 401 (source: NCBI BLink). & (gnl|cdd|39471 : 291.0) no description available & (gnl|cdd|63840 : 108.0) no description available & (reliability: 844.0) & (original description: Putative ROPGAP1, Description = Rho GTPase-activating protein 1, PFAM = PF00786;PF00620)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold16679_8144-31203' '(at4g12640 : 506.0) RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Spen paralogue and orthologue SPOC, C-terminal (InterPro:IPR012921), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (TAIR:AT2G43410.4); Has 8554 Blast hits to 7148 proteins in 405 species: Archae - 8; Bacteria - 199; Metazoa - 4614; Fungi - 1472; Plants - 1436; Viruses - 0; Other Eukaryotes - 825 (source: NCBI BLink). & (gnl|cdd|71185 : 84.6) no description available & (reliability: 1012.0) & (original description: Putative FPA1, Description = Flowering time control protein FPA1, PFAM = PF07744;PF00076;PF00076)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold16964_27573-35944' '(p93564|gpa1_soltu : 714.0) Guanine nucleotide-binding protein alpha-1 subunit (GP-alpha-1) - Solanum tuberosum (Potato) & (at2g26300 : 647.0) Encodes an alpha subunit of a heterotrimeric GTP-binding protein. The active GTP-bound form of GPA1 binds to the GTG1 and GTG2 abscisic acid (ABA) receptors and appears to affect their GTPase and GTP-binding activity, and hence, ABA binding abilities. GPA1 is a positive regulator in ABA-mediated inhibition of stomatal opening. Plants with recessive mutant alleles have complex phenotypes including: reduced brassinolide response, reduced cell divisions, round leaves, short hypocotyls. It is likely to be involved in the signaling events that trigger unfolded protein response-associated cell death. GPA1 is also involved in sugar signaling.; G protein alpha subunit 1 (GP ALPHA 1); FUNCTIONS IN: in 6 functions; INVOLVED IN: in 16 processes; LOCATED IN: plasma membrane, endoplasmic reticulum membrane, heterotrimeric G-protein complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plant G-protein, alpha subunit (InterPro:IPR002976), Guanine nucleotide binding protein (G-protein), alpha subunit (InterPro:IPR001019), G protein alpha subunit, helical insertion (InterPro:IPR011025); BEST Arabidopsis thaliana protein match is: extra-large GTP-binding protein 3 (TAIR:AT1G31930.3); Has 3745 Blast hits to 3647 proteins in 408 species: Archae - 0; Bacteria - 0; Metazoa - 2360; Fungi - 766; Plants - 268; Viruses - 0; Other Eukaryotes - 351 (source: NCBI BLink). & (gnl|cdd|84818 : 378.0) no description available & (gnl|cdd|35305 : 365.0) no description available & (reliability: 1294.0) & (original description: Putative GPA1, Description = Guanine nucleotide-binding protein alpha-1 subunit, PFAM = PF00503)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold17609_15808-20442' '(q40521|rb11b_tobac : 399.0) Ras-related protein Rab11B - Nicotiana tabacum (Common tobacco) & (at5g60860 : 362.0) RAB GTPase homolog A1F (RABA1f); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1G (TAIR:AT3G15060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35310 : 340.0) no description available & (gnl|cdd|57954 : 323.0) no description available & (reliability: 724.0) & (original description: Putative RAB11B, Description = Ras-related protein Rab11B, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold21820_1031-6075' '(at4g13730 : 372.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT1G04830.1). & (gnl|cdd|39767 : 327.0) no description available & (gnl|cdd|47500 : 132.0) no description available & (reliability: 744.0) & (original description: Putative Sb03g043240, Description = Putative uncharacterized protein Sb03g043240, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold23042_23045-30713' '(at3g07890 : 602.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G37290.1); Has 5103 Blast hits to 5093 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 2600; Fungi - 1061; Plants - 534; Viruses - 0; Other Eukaryotes - 908 (source: NCBI BLink). & (gnl|cdd|37269 : 279.0) no description available & (gnl|cdd|47500 : 189.0) no description available & (reliability: 1204.0) & (original description: Putative At3g07890, Description = At3g07890, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold27980_11870-19036' '(at2g41670 : 538.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G10650.1); Has 3980 Blast hits to 3980 proteins in 1445 species: Archae - 109; Bacteria - 2376; Metazoa - 398; Fungi - 429; Plants - 195; Viruses - 0; Other Eukaryotes - 473 (source: NCBI BLink). & (gnl|cdd|37696 : 263.0) no description available & (gnl|cdd|83086 : 181.0) no description available & (reliability: 1076.0) & (original description: Putative SIN2, Description = Short integuments 2, mitochondrial, PFAM = PF01926)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold29610_4861-17490' '(at3g55020 : 811.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G39280.1); Has 8291 Blast hits to 7654 proteins in 526 species: Archae - 15; Bacteria - 632; Metazoa - 4273; Fungi - 1225; Plants - 609; Viruses - 33; Other Eukaryotes - 1504 (source: NCBI BLink). & (gnl|cdd|37269 : 251.0) no description available & (gnl|cdd|47500 : 175.0) no description available & (reliability: 1622.0) & (original description: Putative Sb03g039030, Description = Putative uncharacterized protein Sb03g039030, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold31141_18206-22200' '(at5g10260 : 348.0) RAB GTPase homolog H1E (RABH1e); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab6-related (InterPro:IPR015600); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog H1D (TAIR:AT2G22290.1); Has 27017 Blast hits to 26988 proteins in 737 species: Archae - 21; Bacteria - 160; Metazoa - 14299; Fungi - 3762; Plants - 2966; Viruses - 20; Other Eukaryotes - 5789 (source: NCBI BLink). & (gnl|cdd|35317 : 314.0) no description available & (gnl|cdd|57947 : 277.0) no description available & (q40723|rgp2_orysa : 134.0) Ras-related protein RGP2 (GTP-binding regulatory protein RGP2) - Oryza sativa (Rice) & (reliability: 696.0) & (original description: Putative RABH1E, Description = Ras-related protein RABH1e, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold36628_9737-19626' '(q6z808|rac3_orysa : 365.0) Rac-like GTP-binding protein 3 (OsRac3) - Oryza sativa (Rice) & (at5g62880 : 357.0) A member of ROP GTPase gene family.; RAC-like 10 (RAC10); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras small GTPase, Rab type (InterPro:IPR003579), Ras (InterPro:IPR013753), Ras small GTPase, Ras type (InterPro:IPR003577), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RHO-related protein from plants 10 (TAIR:AT3G48040.1); Has 24116 Blast hits to 24088 proteins in 664 species: Archae - 8; Bacteria - 52; Metazoa - 12643; Fungi - 3430; Plants - 2696; Viruses - 20; Other Eukaryotes - 5267 (source: NCBI BLink). & (gnl|cdd|58016 : 341.0) no description available & (gnl|cdd|35614 : 283.0) no description available & (reliability: 714.0) & (original description: Putative RAC3, Description = Rac-like GTP-binding protein 3, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold38278_1-9932' '(gnl|cdd|84060 : 294.0) no description available & (gnl|cdd|36702 : 222.0) no description available & (at5g18570 : 142.0) Encodes AtObgC, a plant ortholog of bacterial Obg. AtObgC is a chloroplast-targeting GTPase essential for early embryogenesis. Mutations in this locus result in embryo lethality. The protein is dually localized in the stroma and the inner envelope membrane and is involved in thylakoid membrane biogenesis.; EMBRYO DEFECTIVE 269 (EMB269); FUNCTIONS IN: GTPase activity; INVOLVED IN: response to light stimulus, thylakoid membrane organization, embryo development, embryo development ending in seed dormancy; LOCATED IN: chloroplast, chloroplast stroma, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG subdomain (InterPro:IPR006169), GTP-binding protein GTP1/OBG, C-terminal (InterPro:IPR015349), GTP1/OBG (InterPro:IPR006073), GTP1/OBG, conserved site (InterPro:IPR006074), GTP-binding protein, HSR1-related (InterPro:IPR002917), GTP-binding protein Obg/CgtA (InterPro:IPR014100); BEST Arabidopsis thaliana protein match is: GTP-binding protein Obg/CgtA (TAIR:AT1G07615.1); Has 23458 Blast hits to 23162 proteins in 3000 species: Archae - 644; Bacteria - 14053; Metazoa - 1121; Fungi - 826; Plants - 464; Viruses - 52; Other Eukaryotes - 6298 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative obg, Description = GTPase Obg, PFAM = PF01018;PF01926)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold39538_2467-4786' '(gnl|cdd|35504 : 121.0) no description available & (at3g15470 : 120.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G54200.1); Has 35932 Blast hits to 22007 proteins in 749 species: Archae - 56; Bacteria - 5680; Metazoa - 13723; Fungi - 7656; Plants - 4267; Viruses - 6; Other Eukaryotes - 4544 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative At2g37670, Description = WD repeat-containing protein 44, PFAM = )' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold42045_1-4654' '(at1g09630 : 348.0) Encodes a putative GTP-binding protein. Associates with organelles on a pathway from the Golgi to the plasma membrane in interphase. In dividing cells acts at the cell plate.; RAB GTPase 11C (RAB11c); FUNCTIONS IN: GTP binding; INVOLVED IN: cytokinesis; LOCATED IN: endosome, plasma membrane, cell plate; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A2B (TAIR:AT1G07410.1); Has 27576 Blast hits to 27520 proteins in 758 species: Archae - 26; Bacteria - 154; Metazoa - 14618; Fungi - 3770; Plants - 3044; Viruses - 20; Other Eukaryotes - 5944 (source: NCBI BLink). & (gnl|cdd|35310 : 326.0) no description available & (gnl|cdd|57954 : 324.0) no description available & (q39434|rb2bv_betvu : 315.0) Ras-related protein Rab2BV - Beta vulgaris (Sugar beet) & (reliability: 696.0) & (original description: Putative RABA2A, Description = Ras-related protein RABA2a, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold42077_882-12518' '(at5g13300 : 783.0) Belongs to 15-member small GTPase gene family, ARF-GAP domain proteins (AGD); corresponds to AGD3, and is one of four proteins belonging to class 1, together with AGD1, AGD2 and AGD4. The protein contains four domains: BAR domain, PH domain, an ARF-GAP domain, and two Ankyrin repeats. In sfc mutants, the secondary and tertiary veins of cotyledons, leaves, sepals and petals are largely replaced by small segments of discontinuous veins. sfc mutants have exaggerated responses to auxin.; SCARFACE (SFC); FUNCTIONS IN: ARF GTPase activator activity, phosphoinositide binding; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, phloem or xylem histogenesis, leaf morphogenesis; LOCATED IN: cytosol, trans-Golgi network transport vesicle, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), Pleckstrin homology-type (InterPro:IPR011993), Ankyrin repeat-containing domain (InterPro:IPR020683), BAR (InterPro:IPR004148), Pleckstrin homology (InterPro:IPR001849), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 1 (TAIR:AT5G61980.1); Has 64753 Blast hits to 27558 proteins in 1221 species: Archae - 110; Bacteria - 5131; Metazoa - 34265; Fungi - 4887; Plants - 2591; Viruses - 654; Other Eukaryotes - 17115 (source: NCBI BLink). & (gnl|cdd|35741 : 407.0) no description available & (gnl|cdd|85433 : 124.0) no description available & (reliability: 1566.0) & (original description: Putative AGD1, Description = ADP-ribosylation factor GTPase-activating protein AGD1, PFAM = PF13637;PF16746;PF00169;PF01412)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold42446_11598-17511' '(at5g22400 : 349.0) Rho GTPase activating protein with PAK-box/P21-Rho-binding domain; FUNCTIONS IN: Rac GTPase activator activity; INVOLVED IN: signal transduction; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095), Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198); BEST Arabidopsis thaliana protein match is: rac GTPase activating protein (TAIR:AT3G11490.1); Has 3977 Blast hits to 3976 proteins in 184 species: Archae - 0; Bacteria - 0; Metazoa - 2927; Fungi - 443; Plants - 206; Viruses - 0; Other Eukaryotes - 401 (source: NCBI BLink). & (gnl|cdd|39471 : 230.0) no description available & (gnl|cdd|63840 : 103.0) no description available & (reliability: 698.0) & (original description: Putative glysoja_040938, Description = Rho GTPase-activating protein gacA, PFAM = PF00620)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold43020_1-18026' '(at2g43490 : 735.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT3G59570.1). & (gnl|cdd|37408 : 151.0) no description available & (gnl|cdd|47500 : 131.0) no description available & (reliability: 1470.0) & (original description: Putative At2g43490, Description = RAB GTPase activator protein, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold45903_1838-16267' '(at5g06120 : 879.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04490.1). & (gnl|cdd|36624 : 770.0) no description available & (reliability: 1758.0) & (original description: Putative mot59, Description = Exportin-7, PFAM = )' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold46556_7984-11171' '(at1g10870 : 119.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD4 belongs to the Class 1, together with AGD1, AGD2, and AGD3.; ARF-GAP domain 4 (AGD4); FUNCTIONS IN: ARF GTPase activator activity, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), Pleckstrin homology-type (InterPro:IPR011993), Ankyrin repeat-containing domain (InterPro:IPR020683), BAR (InterPro:IPR004148), Pleckstrin homology (InterPro:IPR001849), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 2 (TAIR:AT1G60860.1); Has 23403 Blast hits to 15248 proteins in 655 species: Archae - 77; Bacteria - 1735; Metazoa - 12296; Fungi - 2244; Plants - 1395; Viruses - 252; Other Eukaryotes - 5404 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative dsc1, Description = ADP-ribosylation factor GTPase-activating protein AGD3, PFAM = )' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold47100_1-16293' '(at1g31930 : 862.0) Encodes XLG3 (extra-large G protein 3) that shows significant similarity to the G protein alpha subunit in its C terminal region. Involved in the regulation of root morphological and growth responses.; extra-large GTP-binding protein 3 (XLG3); FUNCTIONS IN: signal transducer activity, guanyl nucleotide binding; INVOLVED IN: in 11 processes; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Guanine nucleotide binding protein (G-protein), alpha subunit (InterPro:IPR001019), G protein alpha subunit, helical insertion (InterPro:IPR011025); BEST Arabidopsis thaliana protein match is: extra-large G-protein 1 (TAIR:AT2G23460.1). & (gnl|cdd|35305 : 274.0) no description available & (gnl|cdd|57932 : 267.0) no description available & (p93163|gpa2_soybn : 184.0) Guanine nucleotide-binding protein alpha-2 subunit (GP-alpha-2) - Glycine max (Soybean) & (reliability: 1724.0) & (original description: Putative GPA1, Description = GPA1 heterotrimeric G protein alpha subunit protein, PFAM = PF00503)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold48339_977-15295' '(at5g54780 : 390.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT4G27100.2); Has 4120 Blast hits to 4004 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 2315; Fungi - 731; Plants - 615; Viruses - 0; Other Eukaryotes - 459 (source: NCBI BLink). & (gnl|cdd|37408 : 211.0) no description available & (gnl|cdd|47500 : 84.6) no description available & (reliability: 780.0) & (original description: Putative Os11g0587500, Description = Os11g0587500 protein, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold48394_5371-14305' '(gnl|cdd|35301 : 313.0) no description available & (gnl|cdd|57953 : 307.0) no description available & (at5g59840 : 306.0) Ras-related small GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 8A (TAIR:AT3G46060.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q39433|rb1bv_betvu : 293.0) Ras-related protein RAB1BV - Beta vulgaris (Sugar beet) & (reliability: 612.0) & (original description: Putative YPTV2, Description = GTP-binding protein yptV2, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold52287_1-8736' '(at5g52580 : 167.0) RabGAP/TBC domain-containing protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195), Protein of unknown function DUF3548 (InterPro:IPR021935); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT4G27100.2). & (reliability: 334.0) & (original description: Putative umc2070, Description = RabGAP/TBC domain-containing protein, PFAM = PF12068)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold53599_4376-7159' '(q40193|rb11c_lotja : 355.0) Ras-related protein Rab11C - Lotus japonicus & (at1g07410 : 352.0) RAB GTPase homolog A2B (RABA2b); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: intracellular protein transport, signal transduction, nucleocytoplasmic transport, protein transport, small GTPase mediated signal transduction; LOCATED IN: endosome, plasma membrane, cell plate; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041), ADP-ribosylation factor (InterPro:IPR006688), Ras (InterPro:IPR013753), Ras small GTPase, Ras type (InterPro:IPR003577), Rab11-related (InterPro:IPR015595), Small GTPase, Rho type (InterPro:IPR003578), Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A2D (TAIR:AT5G59150.1); Has 28965 Blast hits to 28914 proteins in 772 species: Archae - 29; Bacteria - 152; Metazoa - 15139; Fungi - 4328; Plants - 3313; Viruses - 20; Other Eukaryotes - 5984 (source: NCBI BLink). & (gnl|cdd|35310 : 329.0) no description available & (gnl|cdd|57954 : 315.0) no description available & (reliability: 704.0) & (original description: Putative RAB11C, Description = Ras-related protein Rab11C, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold53874_3236-6570' '(at5g17790 : 136.0) Encodes a 85.9 kDa protein containing novel repeats and zinc fingers described as protein interaction domains. VAR3 is a part of a protein complex required for normal chloroplast and palisade cell development. Mutants display a variegated phenotype due to somatic areas lacking or containing developmentally retarded chloroplasts and greatly reduced numbers of palisade cells.; VARIEGATED 3 (VAR3); FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: chloroplast organization; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: zinc finger (Ran-binding) family protein (TAIR:AT1G55040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative VAR3, Description = Zinc finger protein VAR3, chloroplastic, PFAM = )' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold54990_5270-12063' '(at5g45130 : 337.0) small GTP binding protein; RAB homolog 1 (RHA1); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab5-related (InterPro:IPR015599); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT4G19640.1); Has 26267 Blast hits to 26237 proteins in 716 species: Archae - 26; Bacteria - 136; Metazoa - 13722; Fungi - 3681; Plants - 2979; Viruses - 20; Other Eukaryotes - 5703 (source: NCBI BLink). & (p29687|rab5_tobac : 319.0) Ras-related protein Rab5 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|57946 : 289.0) no description available & (gnl|cdd|35315 : 281.0) no description available & (reliability: 674.0) & (original description: Putative RABF2B, Description = Ras-related protein RABF2b, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold58595_3378-9747' '(at2g23460 : 744.0) encodes a novel G-alpha protein that shares similarity to plant, yeast, and animal G-alpha proteins at the C-terminus. It contains an N-terminus that is as large as the C-terminus, is a member of a small family, and is expressed in all tissues examined, including roots, leaves, stems, flowers, and fruits.; extra-large G-protein 1 (XLG1); FUNCTIONS IN: signal transducer activity, guanyl nucleotide binding; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Guanine nucleotide binding protein (G-protein), alpha subunit (InterPro:IPR001019), G protein alpha subunit, helical insertion (InterPro:IPR011025); BEST Arabidopsis thaliana protein match is: extra-large GTP-binding protein 3 (TAIR:AT1G31930.3); Has 3427 Blast hits to 3422 proteins in 394 species: Archae - 0; Bacteria - 2; Metazoa - 2220; Fungi - 618; Plants - 355; Viruses - 0; Other Eukaryotes - 232 (source: NCBI BLink). & (gnl|cdd|35305 : 239.0) no description available & (gnl|cdd|57932 : 223.0) no description available & (p93163|gpa2_soybn : 147.0) Guanine nucleotide-binding protein alpha-2 subunit (GP-alpha-2) - Glycine max (Soybean) & (reliability: 1488.0) & (original description: Putative BnaC08g41460D, Description = BnaC08g41460D protein, PFAM = PF00503)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold63500_29-3879' '(at1g24130 : 346.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, heterotrimeric G-protein complex; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G50120.1); Has 45824 Blast hits to 22056 proteins in 757 species: Archae - 54; Bacteria - 6419; Metazoa - 16905; Fungi - 10404; Plants - 5900; Viruses - 0; Other Eukaryotes - 6142 (source: NCBI BLink). & (gnl|cdd|29257 : 149.0) no description available & (gnl|cdd|35540 : 98.5) no description available & (reliability: 628.0) & (original description: Putative BnaA09g29760D, Description = BnaA09g29760D protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold63522_3416-9642' '(at5g18570 : 604.0) Encodes AtObgC, a plant ortholog of bacterial Obg. AtObgC is a chloroplast-targeting GTPase essential for early embryogenesis. Mutations in this locus result in embryo lethality. The protein is dually localized in the stroma and the inner envelope membrane and is involved in thylakoid membrane biogenesis.; EMBRYO DEFECTIVE 269 (EMB269); FUNCTIONS IN: GTPase activity; INVOLVED IN: response to light stimulus, thylakoid membrane organization, embryo development, embryo development ending in seed dormancy; LOCATED IN: chloroplast, chloroplast stroma, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG subdomain (InterPro:IPR006169), GTP-binding protein GTP1/OBG, C-terminal (InterPro:IPR015349), GTP1/OBG (InterPro:IPR006073), GTP1/OBG, conserved site (InterPro:IPR006074), GTP-binding protein, HSR1-related (InterPro:IPR002917), GTP-binding protein Obg/CgtA (InterPro:IPR014100); BEST Arabidopsis thaliana protein match is: GTP-binding protein Obg/CgtA (TAIR:AT1G07615.1); Has 23458 Blast hits to 23162 proteins in 3000 species: Archae - 644; Bacteria - 14053; Metazoa - 1121; Fungi - 826; Plants - 464; Viruses - 52; Other Eukaryotes - 6298 (source: NCBI BLink). & (gnl|cdd|84060 : 488.0) no description available & (gnl|cdd|36702 : 285.0) no description available & (reliability: 1208.0) & (original description: Putative obg, Description = GTPase Obg, PFAM = PF01018;PF01926;PF09269)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold78362_54-7493' '(at3g05010 : 351.0) Protein of unknown function, transmembrane-40; CONTAINS InterPro DOMAIN/s: Protein of unknown function, transmembrane-40 (InterPro:IPR018781); BEST Arabidopsis thaliana protein match is: Protein of unknown function, transmembrane-40 (TAIR:AT5G27210.1); Has 134 Blast hits to 134 proteins in 47 species: Archae - 0; Bacteria - 6; Metazoa - 78; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|39736 : 257.0) no description available & (reliability: 702.0) & (original description: Putative At3g05010, Description = Candidate G-protein coupled receptor 2, PFAM = PF10160)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold84243_608-3678' '(at5g47520 : 353.0) RAB GTPase homolog A5A (RABA5a); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A5D (TAIR:AT2G31680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35310 : 291.0) no description available & (gnl|cdd|57954 : 287.0) no description available & (q40191|rb11a_lotja : 244.0) Ras-related protein Rab11A - Lotus japonicus & (reliability: 706.0) & (original description: Putative RABA5A, Description = Ras-related protein RABA5a, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold85942_1-1190' '(at3g24620 : 243.0) Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.; RHO guanyl-nucleotide exchange factor 8 (ROPGEF8); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 9 (TAIR:AT4G13240.1); Has 311 Blast hits to 307 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 309; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|67377 : 206.0) no description available & (reliability: 486.0) & (original description: Putative KPP, Description = Rop guanine nucleotide exchange factor 1, PFAM = PF03759)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold101763_356-3823' '(p93340|gblp_nicpl : 624.0) Guanine nucleotide-binding protein subunit beta-like protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g18080 : 520.0) Encodes the Arabidopsis thaliana homolog of the tobacco WD-40 repeat ArcA gene.; ATARCA; FUNCTIONS IN: nucleotide binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosolic ribosome, chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B (TAIR:AT1G48630.1); Has 86693 Blast hits to 36128 proteins in 955 species: Archae - 98; Bacteria - 10140; Metazoa - 33986; Fungi - 19643; Plants - 11429; Viruses - 3; Other Eukaryotes - 11394 (source: NCBI BLink). & (gnl|cdd|35500 : 447.0) no description available & (gnl|cdd|29257 : 234.0) no description available & (reliability: 1030.0) & (original description: Putative ARCA, Description = Guanine nucleotide-binding protein subunit beta-like protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'nbv0.3scaffold120997_1-1737' '(at1g24290 : 366.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; EXPRESSED IN: shoot apex, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), ATPase, AAA-type, core (InterPro:IPR003959), MgsA AAA+ ATPase C-terminal (InterPro:IPR021886), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: replication factor C subunit 3 (TAIR:AT1G77470.1); Has 22422 Blast hits to 22383 proteins in 2992 species: Archae - 614; Bacteria - 15728; Metazoa - 553; Fungi - 700; Plants - 273; Viruses - 62; Other Eukaryotes - 4492 (source: NCBI BLink). & (gnl|cdd|37239 : 340.0) no description available & (gnl|cdd|32437 : 274.0) no description available & (reliability: 732.0) & (original description: Putative WRIP1, Description = WRIP1, PFAM = PF12002;PF16193)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold34_177482-222933' '(at5g06120 : 1469.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04490.1). & (gnl|cdd|36624 : 1276.0) no description available & (reliability: 2938.0) & (original description: Putative mot59, Description = Putative uncharacterized protein mot59, PFAM = PF03810)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold243_278623-282370' '(p93340|gblp_nicpl : 551.0) Guanine nucleotide-binding protein subunit beta-like protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g18080 : 455.0) Encodes the Arabidopsis thaliana homolog of the tobacco WD-40 repeat ArcA gene.; ATARCA; FUNCTIONS IN: nucleotide binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosolic ribosome, chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B (TAIR:AT1G48630.1); Has 86693 Blast hits to 36128 proteins in 955 species: Archae - 98; Bacteria - 10140; Metazoa - 33986; Fungi - 19643; Plants - 11429; Viruses - 3; Other Eukaryotes - 11394 (source: NCBI BLink). & (gnl|cdd|35500 : 387.0) no description available & (gnl|cdd|29257 : 192.0) no description available & (reliability: 902.0) & (original description: Putative RACK1, Description = Receptor of-activated protein C kinase 1, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold341_358614-364827' '(at1g06060 : 249.0) LisH and RanBPM domains containing protein; CONTAINS InterPro DOMAIN/s: Ran binding protein, CRA domain (InterPro:IPR019589), CTLH, C-terminal LisH motif (InterPro:IPR006595), LisH dimerisation motif (InterPro:IPR006594), Ran binding protein-like, CRA domain (InterPro:IPR013144); BEST Arabidopsis thaliana protein match is: SPla/RYanodine receptor (SPRY) domain-containing protein (TAIR:AT1G35470.2); Has 872 Blast hits to 770 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 465; Fungi - 136; Plants - 208; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|37870 : 150.0) no description available & (reliability: 498.0) & (original description: Putative glysoja_009251, Description = UPF0559 protein, PFAM = PF10607)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold341_358688-363066' '(at1g06060 : 153.0) LisH and RanBPM domains containing protein; CONTAINS InterPro DOMAIN/s: Ran binding protein, CRA domain (InterPro:IPR019589), CTLH, C-terminal LisH motif (InterPro:IPR006595), LisH dimerisation motif (InterPro:IPR006594), Ran binding protein-like, CRA domain (InterPro:IPR013144); BEST Arabidopsis thaliana protein match is: SPla/RYanodine receptor (SPRY) domain-containing protein (TAIR:AT1G35470.2); Has 872 Blast hits to 770 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 465; Fungi - 136; Plants - 208; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative glysoja_009251, Description = UPF0559 protein, PFAM = PF10607)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold429_718436-727951' '(q43463|rab7_soybn : 370.0) Ras-related protein Rab7 - Glycine max (Soybean) & (at4g09720 : 344.0) RAB GTPase homolog G3A (RABG3A); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: intracellular protein transport, signal transduction, nucleocytoplasmic transport, protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041), Ras (InterPro:IPR013753), Ras small GTPase, Ras type (InterPro:IPR003577), Small GTPase, Rho type (InterPro:IPR003578), Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog G3B (TAIR:AT1G22740.1). & (gnl|cdd|35615 : 313.0) no description available & (gnl|cdd|57948 : 288.0) no description available & (reliability: 688.0) & (original description: Putative rab7, Description = Ras-related protein Rab7, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold481_386976-393423' '(at5g18570 : 598.0) Encodes AtObgC, a plant ortholog of bacterial Obg. AtObgC is a chloroplast-targeting GTPase essential for early embryogenesis. Mutations in this locus result in embryo lethality. The protein is dually localized in the stroma and the inner envelope membrane and is involved in thylakoid membrane biogenesis.; EMBRYO DEFECTIVE 269 (EMB269); FUNCTIONS IN: GTPase activity; INVOLVED IN: response to light stimulus, thylakoid membrane organization, embryo development, embryo development ending in seed dormancy; LOCATED IN: chloroplast, chloroplast stroma, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG subdomain (InterPro:IPR006169), GTP-binding protein GTP1/OBG, C-terminal (InterPro:IPR015349), GTP1/OBG (InterPro:IPR006073), GTP1/OBG, conserved site (InterPro:IPR006074), GTP-binding protein, HSR1-related (InterPro:IPR002917), GTP-binding protein Obg/CgtA (InterPro:IPR014100); BEST Arabidopsis thaliana protein match is: GTP-binding protein Obg/CgtA (TAIR:AT1G07615.1); Has 23458 Blast hits to 23162 proteins in 3000 species: Archae - 644; Bacteria - 14053; Metazoa - 1121; Fungi - 826; Plants - 464; Viruses - 52; Other Eukaryotes - 6298 (source: NCBI BLink). & (gnl|cdd|84060 : 488.0) no description available & (gnl|cdd|36702 : 284.0) no description available & (reliability: 1196.0) & (original description: Putative OBGL, Description = GTP-binding protein OBGC, chloroplastic, PFAM = PF01018;PF01926;PF09269)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold521_696936-717437' '(at4g38200 : 2190.0) SEC7-like guanine nucleotide exchange family protein; FUNCTIONS IN: binding, ARF guanyl-nucleotide exchange factor activity, guanyl-nucleotide exchange factor activity; INVOLVED IN: regulation of ARF protein signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904), Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF1981, SEC7 associated (InterPro:IPR015403); BEST Arabidopsis thaliana protein match is: SEC7-like guanine nucleotide exchange family protein (TAIR:AT4G35380.1); Has 2912 Blast hits to 2618 proteins in 244 species: Archae - 0; Bacteria - 32; Metazoa - 1541; Fungi - 604; Plants - 295; Viruses - 0; Other Eukaryotes - 440 (source: NCBI BLink). & (gnl|cdd|36147 : 1382.0) no description available & (gnl|cdd|34895 : 274.0) no description available & (reliability: 4380.0) & (original description: Putative BIG1, Description = Brefeldin A-inhibited guanine nucleotide-exchange protein 1, PFAM = PF16213;PF09324;PF01369;PF12783)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold537_205189-260279' '(at3g43300 : 2248.0) AtMIN7 is an immunity associated Arabidopsis protein targeted by HopM1, a conserved Pseudomonas syringae virulence protein. AtMIN7 encodes one of the eight members of the Arabidopsis adenosine diphosphate (ADP) ribosylation factor (ARF) guanine nucleotide exchange factor (GEF) protein family. The AFR GEF proteins are key components of the vesicle trafficking system in eukaryotic cells. HopM1 mediates the destruction of AtMIN7 via the host proteasome.; HOPM interactor 7 (ATMIN7); CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904), Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF1981, SEC7 associated (InterPro:IPR015403); BEST Arabidopsis thaliana protein match is: SEC7-like guanine nucleotide exchange family protein (TAIR:AT1G01960.1). & (gnl|cdd|36147 : 1145.0) no description available & (gnl|cdd|34895 : 262.0) no description available & (reliability: 4496.0) & (original description: Putative BIG5, Description = Brefeldin A-inhibited guanine nucleotide-exchange protein 5, PFAM = PF01369;PF16206;PF09324;PF12783;PF16213)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold566_424838-518104' '(o04369|rac1_lotja : 249.0) Rac-like GTP-binding protein RAC1 - Lotus japonicus & (at1g75840 : 247.0) Belongs to the plant-specific ROP group of Rho GTPases; localized to the plasma membrane of tips of root hairs; involved in polar growth control.; RAC-like GTP binding protein 5 (ARAC5); CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RHO-related protein from plants 2 (TAIR:AT1G20090.1); Has 24632 Blast hits to 24606 proteins in 682 species: Archae - 9; Bacteria - 69; Metazoa - 12688; Fungi - 3833; Plants - 2700; Viruses - 20; Other Eukaryotes - 5313 (source: NCBI BLink). & (gnl|cdd|58016 : 233.0) no description available & (gnl|cdd|35614 : 216.0) no description available & (reliability: 494.0) & (original description: Putative rac1, Description = Ras-related C3 botulinum toxin substrate 1, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold630_614810-627423' '(at5g27540 : 853.0) Encodes a protein with similarity to GTPases that is localized to the mitochondrion. Involved in embryogenesis, pollen tube growth and required for mitochondrial development.; MIRO-related GTP-ase 1 (MIRO1); FUNCTIONS IN: GTP binding; INVOLVED IN: pollen tube growth, mitochondrion organization, embryo development, embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF hand associated, type-1 (InterPro:IPR013566), Mitochondrial Rho-like (InterPro:IPR013684), EF hand associated, type-2 (InterPro:IPR013567), Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Mitochondrial Rho GTPase (InterPro:IPR021181), MIRO (InterPro:IPR020860); BEST Arabidopsis thaliana protein match is: MIRO-related GTP-ase 2 (TAIR:AT3G63150.1); Has 8016 Blast hits to 7980 proteins in 467 species: Archae - 6; Bacteria - 176; Metazoa - 4167; Fungi - 1485; Plants - 887; Viruses - 0; Other Eukaryotes - 1295 (source: NCBI BLink). & (gnl|cdd|36919 : 747.0) no description available & (gnl|cdd|57976 : 246.0) no description available & (reliability: 1706.0) & (original description: Putative MIRO1, Description = Mitochondrial Rho GTPase 1, PFAM = PF08356;PF00071;PF00071;PF08355)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold631_535374-539855' '(gnl|cdd|35504 : 440.0) no description available & (at1g48870 : 365.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: protein phosphatase type 2A regulator activity, signal transducer activity; INVOLVED IN: signal transduction; LOCATED IN: protein phosphatase type 2A complex, heterotrimeric G-protein complex; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory subunit PR55 (InterPro:IPR000009), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G64610.2); Has 34005 Blast hits to 22076 proteins in 685 species: Archae - 42; Bacteria - 5652; Metazoa - 12986; Fungi - 7325; Plants - 3866; Viruses - 0; Other Eukaryotes - 4134 (source: NCBI BLink). & (gnl|cdd|29257 : 113.0) no description available & (reliability: 730.0) & (original description: Putative BnaC06g02280D, Description = BnaC06g02280D protein, PFAM = PF00400;PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold676_459727-469352' '(at3g11730 : 222.0) Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. It has also been identified as an isoprenylated protein.; ATFP8; FUNCTIONS IN: GTP binding, myosin XI tail binding, GTP-dependent protein binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 1A (TAIR:AT5G47200.1); Has 29795 Blast hits to 29734 proteins in 779 species: Archae - 25; Bacteria - 142; Metazoa - 15645; Fungi - 4180; Plants - 3599; Viruses - 20; Other Eukaryotes - 6184 (source: NCBI BLink). & (gnl|cdd|57955 : 219.0) no description available & (p40392|ric1_orysa : 213.0) Ras-related protein RIC1 - Oryza sativa (Rice) & (gnl|cdd|35307 : 205.0) no description available & (reliability: 444.0) & (original description: Putative rab1, Description = GTP-binding protein ypt1, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold924_352871-366848' '(at5g61530 : 517.0) small G protein family protein / RhoGAP family protein; FUNCTIONS IN: Rho GTPase activator activity; INVOLVED IN: signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198). & (gnl|cdd|63840 : 119.0) no description available & (gnl|cdd|39607 : 90.5) no description available & (reliability: 1034.0) & (original description: Putative At5g61530, Description = Uncharacterized Rho GTPase-activating protein At5g61530, PFAM = PF00620)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold937_402466-409813' '(at4g27540 : 218.0) prenylated RAB acceptor 1.H (PRA1.H); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative PRA1H, Description = PRA1 family protein H, PFAM = PF03208)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold1055_47860-55504' '(q43463|rab7_soybn : 390.0) Ras-related protein Rab7 - Glycine max (Soybean) & (at4g09720 : 362.0) RAB GTPase homolog G3A (RABG3A); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: intracellular protein transport, signal transduction, nucleocytoplasmic transport, protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041), Ras (InterPro:IPR013753), Ras small GTPase, Ras type (InterPro:IPR003577), Small GTPase, Rho type (InterPro:IPR003578), Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog G3B (TAIR:AT1G22740.1). & (gnl|cdd|35615 : 333.0) no description available & (gnl|cdd|57948 : 309.0) no description available & (reliability: 724.0) & (original description: Putative rab7, Description = Ras-related protein Rab7, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold1216_463851-478661' '(at1g31650 : 503.0) Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.; RHO guanyl-nucleotide exchange factor 14 (ROPGEF14); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 7 (TAIR:AT5G02010.1); Has 302 Blast hits to 301 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 302; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67377 : 471.0) no description available & (reliability: 1006.0) & (original description: Putative ROPGEF14, Description = Rop guanine nucleotide exchange factor 14, PFAM = PF03759)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold1547_94677-98966' '(at4g02730 : 428.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 105879 Blast hits to 41942 proteins in 964 species: Archae - 68; Bacteria - 10657; Metazoa - 43181; Fungi - 22509; Plants - 14298; Viruses - 12; Other Eukaryotes - 15154 (source: NCBI BLink). & (gnl|cdd|35487 : 280.0) no description available & (gnl|cdd|29257 : 254.0) no description available & (p49027|gblp_orysa : 111.0) Guanine nucleotide-binding protein subunit beta-like protein (GPB-LR) (RWD) - Oryza sativa (Rice) & (reliability: 856.0) & (original description: Putative WDR5B, Description = COMPASS-like H3K4 histone methylase component WDR5B, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold1643_295211-319803' '(at1g03160 : 787.0) A new plant-specific member of the dynamin superfamily; defines a new protein class within the dynamin superfamily of membrane remodeling GTPases that regulates organization of the thylakoid network in plants. Targeted to chloroplasts and associated with thylakoid and envelope membranes as punctate structures. Knockout mutants have abnormalities in chloroplast and thylakoid morphology, including disorganized grana stacks and alterations in the relative proportions of grana and stroma thylakoids. Overexpression of FZL-GFP also conferred defects in thylakoid organization.; FZO-like (FZL); FUNCTIONS IN: thiamin-phosphate diphosphorylase activity, GTP binding, GTPase activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, thylakoid membrane organization; LOCATED IN: chloroplast membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiamine monophosphate synthase (InterPro:IPR003733), Protein synthesis factor, GTP-binding (InterPro:IPR000795); Has 4303 Blast hits to 3755 proteins in 1119 species: Archae - 53; Bacteria - 3491; Metazoa - 428; Fungi - 84; Plants - 61; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink). & (gnl|cdd|35669 : 231.0) no description available & (gnl|cdd|84713 : 90.7) no description available & (reliability: 1574.0) & (original description: Putative iniA, Description = Uncharacterized protein in xynA 3'region, PFAM = PF01926;PF02581)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold1674_41042-58269' '(gnl|cdd|39447 : 325.0) no description available & (at2g03150 : 262.0) embryo defective 1579 (emb1579); FUNCTIONS IN: binding, calcium ion binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 524.0) & (original description: Putative Sb10g022236, Description = Putative uncharacterized protein Sb10g022236, PFAM = PF14443)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold2109_257358-263352' '(at3g07050 : 585.0) GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917), GNL3L/Grn1 putative GTPase (InterPro:IPR014813); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT1G52980.1); Has 11622 Blast hits to 10428 proteins in 1861 species: Archae - 158; Bacteria - 5948; Metazoa - 1715; Fungi - 910; Plants - 502; Viruses - 28; Other Eukaryotes - 2361 (source: NCBI BLink). & (gnl|cdd|37695 : 431.0) no description available & (gnl|cdd|57931 : 274.0) no description available & (reliability: 1170.0) & (original description: Putative NSN1, Description = Guanine nucleotide-binding protein-like NSN1, PFAM = PF01926;PF08701)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold2215_354085-357083' '(at3g07880 : 227.0) SUPERCENTIPEDE1 (SCN1); FUNCTIONS IN: Rho GDP-dissociation inhibitor activity; INVOLVED IN: root epidermal cell differentiation, cell tip growth; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), RHO protein GDP dissociation inhibitor (InterPro:IPR000406); BEST Arabidopsis thaliana protein match is: Immunoglobulin E-set superfamily protein (TAIR:AT1G62450.1); Has 660 Blast hits to 660 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 325; Fungi - 162; Plants - 120; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|38415 : 202.0) no description available & (gnl|cdd|65863 : 96.3) no description available & (reliability: 454.0) & (original description: Putative Sb10g012130, Description = Putative uncharacterized protein Sb10g012130, PFAM = PF02115)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold2259_222961-241184' '(at5g52580 : 635.0) RabGAP/TBC domain-containing protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195), Protein of unknown function DUF3548 (InterPro:IPR021935); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT4G27100.2). & (gnl|cdd|37435 : 99.8) no description available & (reliability: 1270.0) & (original description: Putative At5g52580, Description = RabGAP/TBC domain-containing protein, PFAM = PF00566;PF00566;PF12068)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold2292_140442-152423' '(at5g17790 : 342.0) Encodes a 85.9 kDa protein containing novel repeats and zinc fingers described as protein interaction domains. VAR3 is a part of a protein complex required for normal chloroplast and palisade cell development. Mutants display a variegated phenotype due to somatic areas lacking or containing developmentally retarded chloroplasts and greatly reduced numbers of palisade cells.; VARIEGATED 3 (VAR3); FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: chloroplast organization; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: zinc finger (Ran-binding) family protein (TAIR:AT1G55040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39399 : 84.0) no description available & (reliability: 684.0) & (original description: Putative glysoja_021670, Description = Zinc finger protein VAR3, chloroplastic, PFAM = PF00641;PF00641)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold2294_410943-422579' '(at1g56050 : 327.0) GTP-binding protein-related; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF933 (InterPro:IPR013029), TGS-like (InterPro:IPR012676), GTP1/OBG (InterPro:IPR006073), Conserved hypothetical protein CHP00092 (InterPro:IPR004396), GTP-binding protein, HSR1-related (InterPro:IPR002917), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: GTP binding (TAIR:AT1G30580.1); Has 18400 Blast hits to 18396 proteins in 3002 species: Archae - 377; Bacteria - 10244; Metazoa - 785; Fungi - 603; Plants - 304; Viruses - 0; Other Eukaryotes - 6087 (source: NCBI BLink). & (gnl|cdd|83103 : 318.0) no description available & (gnl|cdd|36704 : 210.0) no description available & (reliability: 654.0) & (original description: Putative engD, Description = Ribosome-binding ATPase YchF, PFAM = PF06071)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold2468_139460-155511' '(at3g55020 : 734.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G39280.1); Has 8291 Blast hits to 7654 proteins in 526 species: Archae - 15; Bacteria - 632; Metazoa - 4273; Fungi - 1225; Plants - 609; Viruses - 33; Other Eukaryotes - 1504 (source: NCBI BLink). & (gnl|cdd|37269 : 243.0) no description available & (gnl|cdd|47500 : 158.0) no description available & (reliability: 1468.0) & (original description: Putative BnaC08g25870D, Description = BnaC08g25870D protein, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold2571_82061-145898' '(at4g16340 : 2830.0) mutant has Seedling lethal; Cotyledon, leaf-shape, trichome defects; Putative Cytoskeletal Protein; SPIKE1 (SPK1); FUNCTIONS IN: GTPase binding, GTP binding, guanyl-nucleotide exchange factor activity; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dedicator of cytokinesis (InterPro:IPR010703); Has 1667 Blast hits to 1104 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 1334; Fungi - 77; Plants - 63; Viruses - 0; Other Eukaryotes - 193 (source: NCBI BLink). & (gnl|cdd|37208 : 924.0) no description available & (gnl|cdd|70391 : 245.0) no description available & (reliability: 5660.0) & (original description: Putative SPK1, Description = Guanine nucleotide exchange factor SPIKE 1, PFAM = PF14429;PF06920)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold2803_253944-264478' '(at3g59920 : 755.0) RAB GDP DISSOCIATION INHIBITOR 2; RAB GDP dissociation inhibitor 2 (GDI2); FUNCTIONS IN: RAB GDP-dissociation inhibitor activity; INVOLVED IN: regulation of GTPase activity, protein transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rab GTPase activator (InterPro:IPR002005), GDP dissociation inhibitor (InterPro:IPR018203), Rab GDI protein (InterPro:IPR000806); BEST Arabidopsis thaliana protein match is: guanosine nucleotide diphosphate dissociation inhibitor 1 (TAIR:AT2G44100.1); Has 1316 Blast hits to 1212 proteins in 257 species: Archae - 2; Bacteria - 2; Metazoa - 653; Fungi - 287; Plants - 181; Viruses - 0; Other Eukaryotes - 191 (source: NCBI BLink). & (gnl|cdd|64840 : 690.0) no description available & (gnl|cdd|36652 : 619.0) no description available & (reliability: 1510.0) & (original description: Putative gdi, Description = Rab GDP dissociation inhibitor alpha, PFAM = PF00996)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold2900_15604-23102' '(at5g03530 : 220.0) Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. CFP:RabC2a appears to co-localize with peroxisomes.; RAB GTPase homolog C2A (RABC2A); FUNCTIONS IN: GTP binding, myosin XI tail binding, GTP-dependent protein binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction, regulation of transcription, DNA-dependent; LOCATED IN: peroxisome; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ras (InterPro:IPR013753), Small GTP-binding protein (InterPro:IPR005225), Ras GTPase (InterPro:IPR001806), Ras small GTPase, Rab type (InterPro:IPR003579), Small GTPase (InterPro:IPR020851), RNA polymerase sigma factor 54, interaction (InterPro:IPR002078), Rab18 (InterPro:IPR015598); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog C2B (TAIR:AT3G09910.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|57949 : 195.0) no description available & (gnl|cdd|35303 : 193.0) no description available & (p36862|yptv3_volca : 158.0) GTP-binding protein yptV3 - Volvox carteri & (reliability: 440.0) & (original description: Putative rab1, Description = Ras-related protein Rab-18, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold3218_184078-187406' '(at1g52380 : 233.0) NUP50 (Nucleoporin 50 kDa) protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular transport; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein 1 (InterPro:IPR000156), Pleckstrin homology-type (InterPro:IPR011993), Nuclear pore complex, NUP2/50/61 (InterPro:IPR015007); BEST Arabidopsis thaliana protein match is: NUP50 (Nucleoporin 50 kDa) protein (TAIR:AT3G15970.1); Has 1614 Blast hits to 1303 proteins in 238 species: Archae - 0; Bacteria - 48; Metazoa - 835; Fungi - 410; Plants - 179; Viruses - 3; Other Eukaryotes - 139 (source: NCBI BLink). & (gnl|cdd|29845 : 104.0) no description available & (reliability: 466.0) & (original description: Putative NbNup50c, Description = Nuclear pore complex protein Nup50c, PFAM = PF08911;PF00638)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold3539_199315-206611' '(at3g59920 : 779.0) RAB GDP DISSOCIATION INHIBITOR 2; RAB GDP dissociation inhibitor 2 (GDI2); FUNCTIONS IN: RAB GDP-dissociation inhibitor activity; INVOLVED IN: regulation of GTPase activity, protein transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rab GTPase activator (InterPro:IPR002005), GDP dissociation inhibitor (InterPro:IPR018203), Rab GDI protein (InterPro:IPR000806); BEST Arabidopsis thaliana protein match is: guanosine nucleotide diphosphate dissociation inhibitor 1 (TAIR:AT2G44100.1); Has 1316 Blast hits to 1212 proteins in 257 species: Archae - 2; Bacteria - 2; Metazoa - 653; Fungi - 287; Plants - 181; Viruses - 0; Other Eukaryotes - 191 (source: NCBI BLink). & (gnl|cdd|64840 : 718.0) no description available & (gnl|cdd|36652 : 643.0) no description available & (reliability: 1558.0) & (original description: Putative gdiV1, Description = GDP dissociation inhibitor protein GDIV1p, PFAM = PF00996)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold3727_12867-34074' '(at4g39520 : 622.0) Encodes a member of the DRG (developmentally regulated G-protein) family. Has GTPase activity.; GTP-binding protein-related; FUNCTIONS IN: GDP binding, GTP binding, GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), TGS (InterPro:IPR004095), GTP1/OBG (InterPro:IPR006073), GTP1/OBG, conserved site (InterPro:IPR006074), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: developmentally regulated G-protein 1 (TAIR:AT1G17470.2); Has 19252 Blast hits to 19228 proteins in 2957 species: Archae - 773; Bacteria - 12312; Metazoa - 831; Fungi - 661; Plants - 370; Viruses - 0; Other Eukaryotes - 4305 (source: NCBI BLink). & (gnl|cdd|36700 : 596.0) no description available & (gnl|cdd|31357 : 517.0) no description available & (reliability: 1244.0) & (original description: Putative DRG3, Description = Developmentally-regulated G-protein 3, PFAM = PF16897;PF02824;PF01926)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold3738_135367-187145' '(at4g27540 : 171.0) prenylated RAB acceptor 1.H (PRA1.H); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative PRA1H, Description = PRA1 family protein H, PFAM = PF03208)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold3833_3074-7647' '(at5g58590 : 216.0) Encodes a Ran-binding protein 1 homolog (RanBP1).; RAN binding protein 1 (RANBP1); FUNCTIONS IN: protein binding; INVOLVED IN: protein import into nucleus, translocation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein 1 (InterPro:IPR000156), Pleckstrin homology-type (InterPro:IPR011993); BEST Arabidopsis thaliana protein match is: Pleckstrin homology (PH) domain superfamily protein (TAIR:AT2G30060.1); Has 1560 Blast hits to 1231 proteins in 240 species: Archae - 0; Bacteria - 8; Metazoa - 836; Fungi - 365; Plants - 158; Viruses - 15; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|29845 : 135.0) no description available & (gnl|cdd|36082 : 84.0) no description available & (reliability: 432.0) & (original description: Putative sbp1, Description = Ran-specific GTPase-activating protein, PFAM = PF00638)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold4278_134495-144352' '(at4g28550 : 545.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: sperm cell, root, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G20440.2); Has 4375 Blast hits to 4233 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 2348; Fungi - 794; Plants - 640; Viruses - 0; Other Eukaryotes - 593 (source: NCBI BLink). & (gnl|cdd|37408 : 308.0) no description available & (gnl|cdd|47500 : 125.0) no description available & (reliability: 1090.0) & (original description: Putative Sb04g036660, Description = Putative uncharacterized protein Sb04g036660, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold4460_76921-95215' '(at1g18070 : 706.0) Translation elongation factor EF1A/initiation factor IF2gamma family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT5G60390.3). & (gnl|cdd|35680 : 633.0) no description available & (gnl|cdd|34853 : 451.0) no description available & (p29521|ef1a1_dauca : 259.0) Elongation factor 1-alpha (EF-1-alpha) - Daucus carota (Carrot) & (reliability: 1412.0) & (original description: Putative GSPT1, Description = Eukaryotic peptide chain release factor GTP-binding subunit ERF3A, PFAM = PF03144;PF00009;PF03143)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold4626_82005-87217' '(gnl|cdd|36886 : 306.0) no description available & (at5g54840 : 294.0) Monomeric G protein. Expressed in the root quiescent center, flowers, and leaf guard cells and hydathodes.; SGP1; FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTPase (InterPro:IPR020851), Mitochondrial Rho-like (InterPro:IPR013684), GTPase, Tem1 (InterPro:IPR017231); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT3G21700.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58011 : 285.0) no description available & (reliability: 588.0) & (original description: Putative spg1, Description = Septum-promoting GTP-binding protein 1, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold4751_65126-75397' '(at4g21520 : 527.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G08390.1); Has 9857 Blast hits to 6114 proteins in 421 species: Archae - 34; Bacteria - 3288; Metazoa - 2459; Fungi - 1903; Plants - 847; Viruses - 0; Other Eukaryotes - 1326 (source: NCBI BLink). & (gnl|cdd|38130 : 401.0) no description available & (gnl|cdd|29257 : 97.0) no description available & (reliability: 1054.0) & (original description: Putative v1g108790, Description = Predicted protein, PFAM = PF00400)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold5118_11412-53173' '(at1g10870 : 872.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD4 belongs to the Class 1, together with AGD1, AGD2, and AGD3.; ARF-GAP domain 4 (AGD4); FUNCTIONS IN: ARF GTPase activator activity, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), Pleckstrin homology-type (InterPro:IPR011993), Ankyrin repeat-containing domain (InterPro:IPR020683), BAR (InterPro:IPR004148), Pleckstrin homology (InterPro:IPR001849), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 2 (TAIR:AT1G60860.1); Has 23403 Blast hits to 15248 proteins in 655 species: Archae - 77; Bacteria - 1735; Metazoa - 12296; Fungi - 2244; Plants - 1395; Viruses - 252; Other Eukaryotes - 5404 (source: NCBI BLink). & (gnl|cdd|35741 : 478.0) no description available & (gnl|cdd|85433 : 140.0) no description available & (reliability: 1744.0) & (original description: Putative AGD4, Description = ADP-ribosylation factor GTPase-activating protein AGD4, PFAM = PF00169;PF12796;PF01412;PF16746)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold5190_66395-68430' '(at5g56230 : 145.0) prenylated RAB acceptor 1.G2 (PRA1.G2); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: prenylated RAB acceptor 1.G1 (TAIR:AT1G55640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38352 : 141.0) no description available & (gnl|cdd|86276 : 109.0) no description available & (reliability: 290.0) & (original description: Putative PRA1G2, Description = PRA1 family protein G2, PFAM = PF03208)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold5273_47382-90943' '(at4g24580 : 365.0) Encodes a Rho GTPase-activating protein that interacts with ROP1 (a Rho GTPase) and regulates pollen tube development. This protein can be observed at the apical tip of growing pollen tubes and on endocytic vesicles traveling to this region of the pollen tube.; ROP1 ENHANCER 1 (REN1); CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Rho GTPase activation protein (RhoGAP) with PH domain (TAIR:AT5G12150.1); Has 23967 Blast hits to 18190 proteins in 1193 species: Archae - 153; Bacteria - 3871; Metazoa - 11779; Fungi - 2242; Plants - 901; Viruses - 71; Other Eukaryotes - 4950 (source: NCBI BLink). & (gnl|cdd|39472 : 187.0) no description available & (gnl|cdd|84905 : 86.8) no description available & (reliability: 694.0) & (original description: Putative REN1, Description = Pleckstrin homology domain-containing protein, PFAM = PF00169;PF00620)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold5273_66917-91068' '(at5g12150 : 150.0) Encodes a protein with similarity to REN1, a Rho GTPase activating protein.; Rho GTPase activation protein (RhoGAP) with PH domain; FUNCTIONS IN: Rho GTPase activator activity, phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Rho GTPase activation protein (InterPro:IPR008936), Pleckstrin homology (InterPro:IPR001849), RhoGAP (InterPro:IPR000198); BEST Arabidopsis thaliana protein match is: Rho GTPase activation protein (RhoGAP) with PH domain (TAIR:AT5G19390.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative REN1, Description = Pleckstrin homology domain-containing protein, PFAM = PF00169)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold5914_38603-43126' '(at3g07880 : 241.0) SUPERCENTIPEDE1 (SCN1); FUNCTIONS IN: Rho GDP-dissociation inhibitor activity; INVOLVED IN: root epidermal cell differentiation, cell tip growth; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), RHO protein GDP dissociation inhibitor (InterPro:IPR000406); BEST Arabidopsis thaliana protein match is: Immunoglobulin E-set superfamily protein (TAIR:AT1G62450.1); Has 660 Blast hits to 660 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 325; Fungi - 162; Plants - 120; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|38415 : 209.0) no description available & (gnl|cdd|65863 : 87.8) no description available & (reliability: 482.0) & (original description: Putative BnaC05g44140D, Description = BnaC05g44140D protein, PFAM = PF02115)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold7170_136-11524' '(at3g11730 : 341.0) Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. It has also been identified as an isoprenylated protein.; ATFP8; FUNCTIONS IN: GTP binding, myosin XI tail binding, GTP-dependent protein binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 1A (TAIR:AT5G47200.1); Has 29795 Blast hits to 29734 proteins in 779 species: Archae - 25; Bacteria - 142; Metazoa - 15645; Fungi - 4180; Plants - 3599; Viruses - 20; Other Eukaryotes - 6184 (source: NCBI BLink). & (p40392|ric1_orysa : 329.0) Ras-related protein RIC1 - Oryza sativa (Rice) & (gnl|cdd|57955 : 314.0) no description available & (gnl|cdd|35307 : 310.0) no description available & (reliability: 682.0) & (original description: Putative RABD1, Description = Ras-related protein RABD1, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold8190_12928-16060' '(at5g17790 : 237.0) Encodes a 85.9 kDa protein containing novel repeats and zinc fingers described as protein interaction domains. VAR3 is a part of a protein complex required for normal chloroplast and palisade cell development. Mutants display a variegated phenotype due to somatic areas lacking or containing developmentally retarded chloroplasts and greatly reduced numbers of palisade cells.; VARIEGATED 3 (VAR3); FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: chloroplast organization; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: zinc finger (Ran-binding) family protein (TAIR:AT1G55040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 474.0) & (original description: Putative VAR3, Description = Zinc finger protein VAR3, chloroplastic, PFAM = PF00641)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold9297_18883-21461' '(gnl|cdd|57952 : 207.0) no description available & (gnl|cdd|35321 : 202.0) no description available & (at4g17170 : 196.0) member of RAB gene family; RAB GTPase homolog B1C (RABB1C); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: ER to Golgi vesicle-mediated transport, pollen sperm cell differentiation, cell growth; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: GTP-binding 2 (TAIR:AT4G35860.1); Has 27116 Blast hits to 27043 proteins in 734 species: Archae - 17; Bacteria - 131; Metazoa - 14131; Fungi - 4055; Plants - 2966; Viruses - 20; Other Eukaryotes - 5796 (source: NCBI BLink). & (p49104|rab2b_maize : 195.0) Ras-related protein Rab-2-B - Zea mays (Maize) & (reliability: 392.0) & (original description: Putative RAB2, Description = Ras-related protein Rab-2, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'nbv0.5scaffold9570_10571-17208' '(at2g23460 : 749.0) encodes a novel G-alpha protein that shares similarity to plant, yeast, and animal G-alpha proteins at the C-terminus. It contains an N-terminus that is as large as the C-terminus, is a member of a small family, and is expressed in all tissues examined, including roots, leaves, stems, flowers, and fruits.; extra-large G-protein 1 (XLG1); FUNCTIONS IN: signal transducer activity, guanyl nucleotide binding; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Guanine nucleotide binding protein (G-protein), alpha subunit (InterPro:IPR001019), G protein alpha subunit, helical insertion (InterPro:IPR011025); BEST Arabidopsis thaliana protein match is: extra-large GTP-binding protein 3 (TAIR:AT1G31930.3); Has 3427 Blast hits to 3422 proteins in 394 species: Archae - 0; Bacteria - 2; Metazoa - 2220; Fungi - 618; Plants - 355; Viruses - 0; Other Eukaryotes - 232 (source: NCBI BLink). & (gnl|cdd|35305 : 242.0) no description available & (gnl|cdd|57932 : 226.0) no description available & (p93163|gpa2_soybn : 162.0) Guanine nucleotide-binding protein alpha-2 subunit (GP-alpha-2) - Glycine max (Soybean) & (reliability: 1498.0) & (original description: Putative XLG1, Description = Extra-large guanine nucleotide-binding protein 1, PFAM = PF00503)' T '30.5' 'signalling.G-proteins' 'niben044scf00000385ctg002_32194-33806' '(q01111|ypt3_nicpl : 268.0) Ras-related protein YPT3 - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g06400 : 214.0) small GTP-binding protein (ara-2); ARA-2; FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1C (TAIR:AT5G45750.1); Has 26542 Blast hits to 26487 proteins in 734 species: Archae - 28; Bacteria - 140; Metazoa - 13950; Fungi - 3642; Plants - 2996; Viruses - 20; Other Eukaryotes - 5766 (source: NCBI BLink). & (gnl|cdd|35310 : 209.0) no description available & (gnl|cdd|57954 : 178.0) no description available & (reliability: 428.0) & (original description: Putative rab, Description = Ras-related protein Rab-11A, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben044scf00000837ctg011_6718-9541' '(at1g31930 : 256.0) Encodes XLG3 (extra-large G protein 3) that shows significant similarity to the G protein alpha subunit in its C terminal region. Involved in the regulation of root morphological and growth responses.; extra-large GTP-binding protein 3 (XLG3); FUNCTIONS IN: signal transducer activity, guanyl nucleotide binding; INVOLVED IN: in 11 processes; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Guanine nucleotide binding protein (G-protein), alpha subunit (InterPro:IPR001019), G protein alpha subunit, helical insertion (InterPro:IPR011025); BEST Arabidopsis thaliana protein match is: extra-large G-protein 1 (TAIR:AT2G23460.1). & (gnl|cdd|35305 : 153.0) no description available & (gnl|cdd|57932 : 144.0) no description available & (p49082|gpa1_lotja : 100.0) Guanine nucleotide-binding protein alpha-1 subunit (GP-alpha-1) - Lotus japonicus & (reliability: 512.0) & (original description: Putative GPA1, Description = Guanine nucleotide-binding protein alpha-2 subunit, PFAM = PF00503)' T '30.5' 'signalling.G-proteins' 'niben044scf00001388ctg000_13679-21248' '(o82626|erg_antma : 275.0) GTP-binding protein ERG - Antirrhinum majus (Garden snapdragon) & (at1g30960 : 266.0) GTP-binding family protein; FUNCTIONS IN: RNA binding, GTP binding; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, prokaryotic type (InterPro:IPR009019), K Homology, type 2 (InterPro:IPR004044), Small GTP-binding protein (InterPro:IPR005225), GTP-binding protein Era (InterPro:IPR005662), GTP-binding protein, HSR1-related (InterPro:IPR002917), K homology-like, alpha/beta (InterPro:IPR015946); BEST Arabidopsis thaliana protein match is: RNA binding;GTP binding (TAIR:AT5G66470.1); Has 21534 Blast hits to 19384 proteins in 2851 species: Archae - 72; Bacteria - 16256; Metazoa - 383; Fungi - 140; Plants - 214; Viruses - 0; Other Eukaryotes - 4469 (source: NCBI BLink). & (gnl|cdd|36637 : 179.0) no description available & (gnl|cdd|58046 : 154.0) no description available & (reliability: 532.0) & (original description: Putative ERG, Description = GTP-binding protein ERG, PFAM = PF01926)' T '30.5' 'signalling.G-proteins' 'niben044scf00001388ctg001_65-2746' '(o82626|erg_antma : 195.0) GTP-binding protein ERG - Antirrhinum majus (Garden snapdragon) & (at1g30960 : 171.0) GTP-binding family protein; FUNCTIONS IN: RNA binding, GTP binding; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, prokaryotic type (InterPro:IPR009019), K Homology, type 2 (InterPro:IPR004044), Small GTP-binding protein (InterPro:IPR005225), GTP-binding protein Era (InterPro:IPR005662), GTP-binding protein, HSR1-related (InterPro:IPR002917), K homology-like, alpha/beta (InterPro:IPR015946); BEST Arabidopsis thaliana protein match is: RNA binding;GTP binding (TAIR:AT5G66470.1); Has 21534 Blast hits to 19384 proteins in 2851 species: Archae - 72; Bacteria - 16256; Metazoa - 383; Fungi - 140; Plants - 214; Viruses - 0; Other Eukaryotes - 4469 (source: NCBI BLink). & (gnl|cdd|36637 : 126.0) no description available & (gnl|cdd|80503 : 90.5) no description available & (reliability: 342.0) & (original description: Putative ERG, Description = GTP-binding protein ERG, PFAM = PF07650)' T '30.5' 'signalling.G-proteins' 'niben044scf00004703ctg006_1-3795' '(at1g02130 : 353.0) Belongs to the Rab1 GTPase subfamily. This small GTP-binding protein is required in ER to Golgi transportation.; RAS 5 (RA-5); FUNCTIONS IN: GTP binding; INVOLVED IN: response to cadmium ion, ER to Golgi vesicle-mediated transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 1A (TAIR:AT5G47200.1); Has 30420 Blast hits to 30350 proteins in 816 species: Archae - 27; Bacteria - 199; Metazoa - 15882; Fungi - 4318; Plants - 3658; Viruses - 20; Other Eukaryotes - 6316 (source: NCBI BLink). & (p40392|ric1_orysa : 348.0) Ras-related protein RIC1 - Oryza sativa (Rice) & (gnl|cdd|35307 : 320.0) no description available & (gnl|cdd|57955 : 317.0) no description available & (reliability: 706.0) & (original description: Putative RABD2A, Description = Ras-related protein RABD2a, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben044scf00005165ctg004_1991-14026' '(at4g07410 : 939.0) Transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT1G27470.1); Has 10654 Blast hits to 6476 proteins in 452 species: Archae - 14; Bacteria - 3757; Metazoa - 2166; Fungi - 2748; Plants - 788; Viruses - 0; Other Eukaryotes - 1181 (source: NCBI BLink). & (gnl|cdd|37259 : 491.0) no description available & (gnl|cdd|29257 : 90.1) no description available & (reliability: 1878.0) & (original description: Putative At1g27470, Description = Putative uncharacterized protein At1g27470, PFAM = PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'niben044scf00005607ctg012_1-2308' '(at5g46070 : 151.0) Guanylate-binding family protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: immune response; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Guanylate-binding protein, N-terminal (InterPro:IPR015894), Guanylate-binding protein, C-terminal (InterPro:IPR003191); BEST Arabidopsis thaliana protein match is: guanylate-binding family protein (TAIR:AT1G03830.2); Has 135716 Blast hits to 74856 proteins in 3470 species: Archae - 1642; Bacteria - 27962; Metazoa - 58309; Fungi - 11332; Plants - 7596; Viruses - 496; Other Eukaryotes - 28379 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative At5g46070, Description = Interferon-induced guanylate-binding protein 2, PFAM = )' T '30.5' 'signalling.G-proteins' 'niben044scf00007021ctg004_1-2322' '(at5g06120 : 145.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04490.1). & (gnl|cdd|36624 : 124.0) no description available & (reliability: 290.0) & (original description: Putative At5g06120, Description = BnaC09g49320D protein, PFAM = )' T '30.5' 'signalling.G-proteins' 'niben044scf00007598ctg009_1-8537' '(at5g46070 : 613.0) Guanylate-binding family protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: immune response; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Guanylate-binding protein, N-terminal (InterPro:IPR015894), Guanylate-binding protein, C-terminal (InterPro:IPR003191); BEST Arabidopsis thaliana protein match is: guanylate-binding family protein (TAIR:AT1G03830.2); Has 135716 Blast hits to 74856 proteins in 3470 species: Archae - 1642; Bacteria - 27962; Metazoa - 58309; Fungi - 11332; Plants - 7596; Viruses - 496; Other Eukaryotes - 28379 (source: NCBI BLink). & (gnl|cdd|85935 : 208.0) no description available & (gnl|cdd|37248 : 169.0) no description available & (reliability: 1226.0) & (original description: Putative NAEGRDRAFT_65393, Description = Predicted protein, PFAM = PF02841;PF02263)' T '30.5' 'signalling.G-proteins' 'niben044scf00007993ctg038_6375-10540' '(at3g07410 : 308.0) RAB GTPase homolog A5B (RABA5b); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G43130.1); Has 27936 Blast hits to 27886 proteins in 749 species: Archae - 21; Bacteria - 143; Metazoa - 14734; Fungi - 3835; Plants - 3288; Viruses - 20; Other Eukaryotes - 5895 (source: NCBI BLink). & (gnl|cdd|35310 : 275.0) no description available & (gnl|cdd|57954 : 273.0) no description available & (q39572|yptc6_chlre : 221.0) Ras-related protein YPTC6 - Chlamydomonas reinhardtii & (reliability: 616.0) & (original description: Putative RABA5B, Description = Ras-related protein RABA5b, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben044scf00007999ctg000_1898-16791' '(at1g18070 : 733.0) Translation elongation factor EF1A/initiation factor IF2gamma family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT5G60390.3). & (gnl|cdd|35680 : 637.0) no description available & (gnl|cdd|34853 : 451.0) no description available & (p29521|ef1a1_dauca : 277.0) Elongation factor 1-alpha (EF-1-alpha) - Daucus carota (Carrot) & (reliability: 1466.0) & (original description: Putative GSPT1, Description = Eukaryotic peptide chain release factor GTP-binding subunit ERF3A, PFAM = PF03144;PF03143;PF00009)' T '30.5' 'signalling.G-proteins' 'niben044scf00008116ctg002_1-5923' '(at3g07890 : 664.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G37290.1); Has 5103 Blast hits to 5093 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 2600; Fungi - 1061; Plants - 534; Viruses - 0; Other Eukaryotes - 908 (source: NCBI BLink). & (gnl|cdd|37269 : 296.0) no description available & (gnl|cdd|47500 : 194.0) no description available & (reliability: 1328.0) & (original description: Putative At3g07890, Description = At3g07890, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben044scf00008268ctg001_63871-68725' '(at4g21520 : 219.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G08390.1); Has 9857 Blast hits to 6114 proteins in 421 species: Archae - 34; Bacteria - 3288; Metazoa - 2459; Fungi - 1903; Plants - 847; Viruses - 0; Other Eukaryotes - 1326 (source: NCBI BLink). & (gnl|cdd|38130 : 181.0) no description available & (reliability: 438.0) & (original description: Putative Gnb5, Description = Telomerase Cajal body protein 1, PFAM = )' T '30.5' 'signalling.G-proteins' 'niben044scf00008740ctg008_1-3479' '(at5g05000 : 360.0) Outer membrane GTPase protein that may function in import of nuclear encoded proteins into the chloroplast. Phosphorylation of the G-domains regulate translocon assembly.; translocon at the outer envelope membrane of chloroplasts 34 (TOC34); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: protein targeting to chloroplast, chloroplast localization; LOCATED IN: chloroplast outer membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703), Chloroplast protein import component Toc34 (InterPro:IPR005688); BEST Arabidopsis thaliana protein match is: translocon at the outer envelope membrane of chloroplasts 33 (TAIR:AT1G02280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41009|toc34_pea : 356.0) Translocase of chloroplast 34 (EC 3.6.5.-) (34 kDa chloroplast outer envelope protein) (GTP-binding protein OEP34) (GTP-binding protein IAP34) - Pisum sativum (Garden pea) & (gnl|cdd|57945 : 327.0) no description available & (reliability: 648.0) & (original description: Putative TOC34, Description = Translocase of chloroplast 34, chloroplastic, PFAM = PF04548)' T '30.5' 'signalling.G-proteins' 'niben044scf00009090ctg014_2346-7166' '(at3g49350 : 505.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT5G24390.1); Has 4289 Blast hits to 3657 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 2316; Fungi - 775; Plants - 693; Viruses - 0; Other Eukaryotes - 505 (source: NCBI BLink). & (gnl|cdd|37408 : 313.0) no description available & (gnl|cdd|47500 : 106.0) no description available & (reliability: 1010.0) & (original description: Putative KK1_048266, Description = GTPase-activating protein gyp7, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben044scf00009468ctg005_1845-6310' '(at4g02730 : 427.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 105879 Blast hits to 41942 proteins in 964 species: Archae - 68; Bacteria - 10657; Metazoa - 43181; Fungi - 22509; Plants - 14298; Viruses - 12; Other Eukaryotes - 15154 (source: NCBI BLink). & (gnl|cdd|35487 : 279.0) no description available & (gnl|cdd|29257 : 252.0) no description available & (p49027|gblp_orysa : 111.0) Guanine nucleotide-binding protein subunit beta-like protein (GPB-LR) (RWD) - Oryza sativa (Rice) & (reliability: 854.0) & (original description: Putative WDR5B, Description = COMPASS-like H3K4 histone methylase component WDR5B, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'niben044scf00009615ctg020_12275-19326' '(at3g54190 : 811.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G38630.1); Has 138 Blast hits to 136 proteins in 32 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 1622.0) & (original description: Putative)' T '30.5' 'signalling.G-proteins' 'niben044scf00010672ctg024_1-4234' '(at5g60860 : 387.0) RAB GTPase homolog A1F (RABA1f); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1G (TAIR:AT3G15060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q40521|rb11b_tobac : 382.0) Ras-related protein Rab11B - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35310 : 345.0) no description available & (gnl|cdd|57954 : 320.0) no description available & (reliability: 774.0) & (original description: Putative RABA1F, Description = Ras-related protein RABA1f, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben044scf00011122ctg016_252-2664' '(at5g22400 : 112.0) Rho GTPase activating protein with PAK-box/P21-Rho-binding domain; FUNCTIONS IN: Rac GTPase activator activity; INVOLVED IN: signal transduction; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095), Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198); BEST Arabidopsis thaliana protein match is: rac GTPase activating protein (TAIR:AT3G11490.1); Has 3977 Blast hits to 3976 proteins in 184 species: Archae - 0; Bacteria - 0; Metazoa - 2927; Fungi - 443; Plants - 206; Viruses - 0; Other Eukaryotes - 401 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative pco061957, Description = Rho GTPase-activating protein gacA, PFAM = PF00786)' T '30.5' 'signalling.G-proteins' 'niben044scf00011193ctg005_1-7079' '(at1g52980 : 743.0) GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917), NGP1, N-terminal (InterPro:IPR012971); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT3G07050.1); Has 37841 Blast hits to 9407 proteins in 1963 species: Archae - 139; Bacteria - 33291; Metazoa - 1149; Fungi - 897; Plants - 387; Viruses - 125; Other Eukaryotes - 1853 (source: NCBI BLink). & (gnl|cdd|37634 : 651.0) no description available & (gnl|cdd|57929 : 302.0) no description available & (reliability: 1486.0) & (original description: Putative NUG2, Description = Nuclear/nucleolar GTPase 2, PFAM = PF08153;PF01926)' T '30.5' 'signalling.G-proteins' 'niben044scf00012704ctg008_1-7774' '(at2g44100 : 741.0) GDP dissociation inhibitor involved in vesicular membrane traffic; guanosine nucleotide diphosphate dissociation inhibitor 1 (GDI1); CONTAINS InterPro DOMAIN/s: Rab GTPase activator (InterPro:IPR002005), GDP dissociation inhibitor (InterPro:IPR018203), Rab GDI protein (InterPro:IPR000806); BEST Arabidopsis thaliana protein match is: RAB GDP dissociation inhibitor 2 (TAIR:AT3G59920.1); Has 1320 Blast hits to 1214 proteins in 252 species: Archae - 2; Bacteria - 0; Metazoa - 653; Fungi - 281; Plants - 182; Viruses - 0; Other Eukaryotes - 202 (source: NCBI BLink). & (gnl|cdd|64840 : 692.0) no description available & (gnl|cdd|36652 : 613.0) no description available & (reliability: 1482.0) & (original description: Putative gdi, Description = GDP dissociation inhibitor, PFAM = PF00996)' T '30.5' 'signalling.G-proteins' 'niben044scf00013027ctg002_15264-45729' '(at3g49180 : 479.0) ROOT INITIATION DEFECTIVE 3 (RID3); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G11160.1); Has 42486 Blast hits to 21489 proteins in 714 species: Archae - 48; Bacteria - 7251; Metazoa - 15456; Fungi - 9258; Plants - 4698; Viruses - 0; Other Eukaryotes - 5775 (source: NCBI BLink). & (gnl|cdd|35865 : 301.0) no description available & (gnl|cdd|29257 : 115.0) no description available & (reliability: 958.0) & (original description: Putative RID3, Description = Protein ROOT INITIATION DEFECTIVE 3, PFAM = PF00400;PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'niben044scf00013323ctg002_6159-12281' '(at4g35860 : 224.0) GTP-binding protein ATGB2; GTP-binding 2 (GB2); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Ras small GTPase, Rab type (InterPro:IPR003579), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog B1C (TAIR:AT4G17170.1); Has 23664 Blast hits to 23631 proteins in 677 species: Archae - 2; Bacteria - 77; Metazoa - 12254; Fungi - 3226; Plants - 2690; Viruses - 20; Other Eukaryotes - 5395 (source: NCBI BLink). & (q39570|yptc4_chlre : 189.0) GTP-binding protein YPTC4 - Chlamydomonas reinhardtii & (gnl|cdd|35321 : 174.0) no description available & (gnl|cdd|57952 : 151.0) no description available & (reliability: 448.0) & (original description: Putative RAB2A, Description = Ras-related protein Rab-2A, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben044scf00014042ctg001_3926-11103' '(at3g49350 : 569.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT5G24390.1); Has 4289 Blast hits to 3657 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 2316; Fungi - 775; Plants - 693; Viruses - 0; Other Eukaryotes - 505 (source: NCBI BLink). & (gnl|cdd|37408 : 344.0) no description available & (gnl|cdd|47500 : 121.0) no description available & (reliability: 1138.0) & (original description: Putative BnaUnng00190D, Description = BnaUnng00190D protein, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben044scf00014306ctg000_1-3480' '(at3g55020 : 138.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G39280.1); Has 8291 Blast hits to 7654 proteins in 526 species: Archae - 15; Bacteria - 632; Metazoa - 4273; Fungi - 1225; Plants - 609; Viruses - 33; Other Eukaryotes - 1504 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative At2g37290, Description = TBC1 domain family member 8B, PFAM = )' T '30.5' 'signalling.G-proteins' 'niben044scf00014940ctg006_1-17162' '(gnl|cdd|39447 : 333.0) no description available & (at2g03150 : 263.0) embryo defective 1579 (emb1579); FUNCTIONS IN: binding, calcium ion binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative At2g03150, Description = DBC1/CARP1-like protein, PFAM = PF14443)' T '30.5' 'signalling.G-proteins' 'niben044scf00014969ctg001_22096-27769' '(at3g07880 : 131.0) SUPERCENTIPEDE1 (SCN1); FUNCTIONS IN: Rho GDP-dissociation inhibitor activity; INVOLVED IN: root epidermal cell differentiation, cell tip growth; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), RHO protein GDP dissociation inhibitor (InterPro:IPR000406); BEST Arabidopsis thaliana protein match is: Immunoglobulin E-set superfamily protein (TAIR:AT1G62450.1); Has 660 Blast hits to 660 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 325; Fungi - 162; Plants - 120; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|38415 : 119.0) no description available & (reliability: 262.0) & (original description: Putative RhoGDI1, Description = Rho guanine dissociation inhibitor, PFAM = PF02115)' T '30.5' 'signalling.G-proteins' 'niben044scf00015794ctg008_3915-14690' '(at5g17790 : 342.0) Encodes a 85.9 kDa protein containing novel repeats and zinc fingers described as protein interaction domains. VAR3 is a part of a protein complex required for normal chloroplast and palisade cell development. Mutants display a variegated phenotype due to somatic areas lacking or containing developmentally retarded chloroplasts and greatly reduced numbers of palisade cells.; VARIEGATED 3 (VAR3); FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: chloroplast organization; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: zinc finger (Ran-binding) family protein (TAIR:AT1G55040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 684.0) & (original description: Putative glysoja_021670, Description = Zinc finger protein VAR3, chloroplastic, PFAM = PF00641;PF00641)' T '30.5' 'signalling.G-proteins' 'niben044scf00016714ctg001_1-6197' '(at4g38200 : 537.0) SEC7-like guanine nucleotide exchange family protein; FUNCTIONS IN: binding, ARF guanyl-nucleotide exchange factor activity, guanyl-nucleotide exchange factor activity; INVOLVED IN: regulation of ARF protein signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904), Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF1981, SEC7 associated (InterPro:IPR015403); BEST Arabidopsis thaliana protein match is: SEC7-like guanine nucleotide exchange family protein (TAIR:AT4G35380.1); Has 2912 Blast hits to 2618 proteins in 244 species: Archae - 0; Bacteria - 32; Metazoa - 1541; Fungi - 604; Plants - 295; Viruses - 0; Other Eukaryotes - 440 (source: NCBI BLink). & (gnl|cdd|36147 : 368.0) no description available & (reliability: 1074.0) & (original description: Putative BIG1, Description = Brefeldin A-inhibited guanine nucleotide-exchange protein 2, PFAM = PF16213;PF12783)' T '30.5' 'signalling.G-proteins' 'niben044scf00016864ctg015_1-4195' '(at5g18570 : 469.0) Encodes AtObgC, a plant ortholog of bacterial Obg. AtObgC is a chloroplast-targeting GTPase essential for early embryogenesis. Mutations in this locus result in embryo lethality. The protein is dually localized in the stroma and the inner envelope membrane and is involved in thylakoid membrane biogenesis.; EMBRYO DEFECTIVE 269 (EMB269); FUNCTIONS IN: GTPase activity; INVOLVED IN: response to light stimulus, thylakoid membrane organization, embryo development, embryo development ending in seed dormancy; LOCATED IN: chloroplast, chloroplast stroma, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG subdomain (InterPro:IPR006169), GTP-binding protein GTP1/OBG, C-terminal (InterPro:IPR015349), GTP1/OBG (InterPro:IPR006073), GTP1/OBG, conserved site (InterPro:IPR006074), GTP-binding protein, HSR1-related (InterPro:IPR002917), GTP-binding protein Obg/CgtA (InterPro:IPR014100); BEST Arabidopsis thaliana protein match is: GTP-binding protein Obg/CgtA (TAIR:AT1G07615.1); Has 23458 Blast hits to 23162 proteins in 3000 species: Archae - 644; Bacteria - 14053; Metazoa - 1121; Fungi - 826; Plants - 464; Viruses - 52; Other Eukaryotes - 6298 (source: NCBI BLink). & (gnl|cdd|84060 : 434.0) no description available & (gnl|cdd|36702 : 282.0) no description available & (reliability: 938.0) & (original description: Putative obg, Description = GTPase Obg, PFAM = PF01018;PF01926)' T '30.5' 'signalling.G-proteins' 'niben044scf00017553ctg003_1-12134' '(at5g52580 : 582.0) RabGAP/TBC domain-containing protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195), Protein of unknown function DUF3548 (InterPro:IPR021935); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT4G27100.2). & (gnl|cdd|37408 : 296.0) no description available & (gnl|cdd|47500 : 161.0) no description available & (reliability: 1164.0) & (original description: Putative gyp7, Description = GTPase-activating protein GYP7, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben044scf00018433ctg001_12432-15407' '(at2g38360 : 197.0) prenylated RAB acceptor 1.B4 (PRA1.B4); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: prenylated RAB acceptor 1.B5 (TAIR:AT5G01640.1); Has 506 Blast hits to 506 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 53; Plants - 299; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|38352 : 193.0) no description available & (gnl|cdd|86276 : 159.0) no description available & (reliability: 358.0) & (original description: Putative PRA1B4, Description = PRA1 family protein B4, PFAM = PF03208)' T '30.5' 'signalling.G-proteins' 'niben044scf00019031ctg003_1-8583' '(at4g13730 : 568.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT1G04830.1). & (gnl|cdd|39767 : 421.0) no description available & (gnl|cdd|47500 : 133.0) no description available & (reliability: 1136.0) & (original description: Putative At1g04830, Description = RabGAP/TBC domain-containing protein, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben044scf00019745ctg024_5510-8662' '(at1g10870 : 121.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD4 belongs to the Class 1, together with AGD1, AGD2, and AGD3.; ARF-GAP domain 4 (AGD4); FUNCTIONS IN: ARF GTPase activator activity, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), Pleckstrin homology-type (InterPro:IPR011993), Ankyrin repeat-containing domain (InterPro:IPR020683), BAR (InterPro:IPR004148), Pleckstrin homology (InterPro:IPR001849), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 2 (TAIR:AT1G60860.1); Has 23403 Blast hits to 15248 proteins in 655 species: Archae - 77; Bacteria - 1735; Metazoa - 12296; Fungi - 2244; Plants - 1395; Viruses - 252; Other Eukaryotes - 5404 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative dsc1, Description = ADP-ribosylation factor GTPase-activating protein AGD3, PFAM = )' T '30.5' 'signalling.G-proteins' 'niben044scf00020551ctg013_417-4392' '(o04369|rac1_lotja : 251.0) Rac-like GTP-binding protein RAC1 - Lotus japonicus & (at1g75840 : 248.0) Belongs to the plant-specific ROP group of Rho GTPases; localized to the plasma membrane of tips of root hairs; involved in polar growth control.; RAC-like GTP binding protein 5 (ARAC5); CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RHO-related protein from plants 2 (TAIR:AT1G20090.1); Has 24632 Blast hits to 24606 proteins in 682 species: Archae - 9; Bacteria - 69; Metazoa - 12688; Fungi - 3833; Plants - 2700; Viruses - 20; Other Eukaryotes - 5313 (source: NCBI BLink). & (gnl|cdd|58016 : 236.0) no description available & (gnl|cdd|35614 : 219.0) no description available & (reliability: 496.0) & (original description: Putative rac1, Description = Ras-related C3 botulinum toxin substrate 1, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben044scf00020706ctg015_863-4894' '(at1g01700 : 563.0) Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.; RHO guanyl-nucleotide exchange factor 2 (ROPGEF2); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 3 (TAIR:AT4G00460.2); Has 308 Blast hits to 304 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 308; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67377 : 521.0) no description available & (reliability: 1126.0) & (original description: Putative ROPGEF3, Description = Rop guanine nucleotide exchange factor 3, PFAM = PF03759)' T '30.5' 'signalling.G-proteins' 'niben044scf00020891ctg005_1-4077' '(at5g15930 : 555.0) Encodes a putative plant adhesion molecule.; plant adhesion molecule 1 (PAM1); FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT3G02460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36318 : 248.0) no description available & (gnl|cdd|34807 : 191.0) no description available & (reliability: 1098.0) & (original description: Putative PAM1, Description = Plant adhesion molecule 1, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben044scf00021599ctg011_2429-7299' '(at4g04900 : 85.9) encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Most similar to RIC9 and RIC11 (subfamily group I). Gene is expressed predominantly in roots, leaves, and seedlings.; ROP-interactive CRIB motif-containing protein 10 (RIC10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen tube growth; LOCATED IN: cytoplasm; EXPRESSED IN: seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095); BEST Arabidopsis thaliana protein match is: PAK-box/P21-Rho-binding family protein (TAIR:AT4G21745.1); Has 685 Blast hits to 255 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 53; Fungi - 27; Plants - 173; Viruses - 0; Other Eukaryotes - 432 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative EFTS, Description = CRIB domain-containing protein RIC10, PFAM = PF00786)' T '30.5' 'signalling.G-proteins' 'niben044scf00023730ctg003_4171-8762' '(at4g29830 : 412.0) The protein is composed of repeats of WD motif which is involved in protein complex formation. The gene is involved in flower timing and flower development. This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase. Loss of gene function leads to a redistribution of H3K4me3 and K3K36me2 modifications within genes but not a change in the overall abundance of these modifications within chromatin.; vernalization independence 3 (VIP3); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: histone H3-K4 methylation, histone H3-K36 methylation, negative regulation of flower development; LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related (TAIR:AT2G41500.1); Has 81424 Blast hits to 33679 proteins in 849 species: Archae - 94; Bacteria - 9736; Metazoa - 32144; Fungi - 18699; Plants - 10476; Viruses - 0; Other Eukaryotes - 10275 (source: NCBI BLink). & (gnl|cdd|29257 : 188.0) no description available & (gnl|cdd|35493 : 138.0) no description available & (reliability: 824.0) & (original description: Putative VIP3, Description = WD repeat-containing protein VIP3, PFAM = PF00400;PF00400;PF00400;PF00400;PF12894)' T '30.5' 'signalling.G-proteins' 'niben044scf00025772ctg003_2714-5808' '(at3g05010 : 143.0) Protein of unknown function, transmembrane-40; CONTAINS InterPro DOMAIN/s: Protein of unknown function, transmembrane-40 (InterPro:IPR018781); BEST Arabidopsis thaliana protein match is: Protein of unknown function, transmembrane-40 (TAIR:AT5G27210.1); Has 134 Blast hits to 134 proteins in 47 species: Archae - 0; Bacteria - 6; Metazoa - 78; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|39736 : 121.0) no description available & (reliability: 286.0) & (original description: Putative At3g05010, Description = Transmembrane protein, putative, PFAM = PF10160)' T '30.5' 'signalling.G-proteins' 'niben044scf00025772ctg004_397-3175' '(at3g05010 : 170.0) Protein of unknown function, transmembrane-40; CONTAINS InterPro DOMAIN/s: Protein of unknown function, transmembrane-40 (InterPro:IPR018781); BEST Arabidopsis thaliana protein match is: Protein of unknown function, transmembrane-40 (TAIR:AT5G27210.1); Has 134 Blast hits to 134 proteins in 47 species: Archae - 0; Bacteria - 6; Metazoa - 78; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|39736 : 127.0) no description available & (reliability: 340.0) & (original description: Putative At3g05010, Description = Transmembrane protein, putative, PFAM = PF10160)' T '30.5' 'signalling.G-proteins' 'niben044scf00027353ctg010_1-9975' '(at5g54840 : 308.0) Monomeric G protein. Expressed in the root quiescent center, flowers, and leaf guard cells and hydathodes.; SGP1; FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTPase (InterPro:IPR020851), Mitochondrial Rho-like (InterPro:IPR013684), GTPase, Tem1 (InterPro:IPR017231); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT3G21700.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36886 : 282.0) no description available & (gnl|cdd|58011 : 272.0) no description available & (reliability: 616.0) & (original description: Putative sgp1, Description = Monomeric G protein SGP1, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben044scf00028604ctg005_10564-16504' '(at5g46070 : 210.0) Guanylate-binding family protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: immune response; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Guanylate-binding protein, N-terminal (InterPro:IPR015894), Guanylate-binding protein, C-terminal (InterPro:IPR003191); BEST Arabidopsis thaliana protein match is: guanylate-binding family protein (TAIR:AT1G03830.2); Has 135716 Blast hits to 74856 proteins in 3470 species: Archae - 1642; Bacteria - 27962; Metazoa - 58309; Fungi - 11332; Plants - 7596; Viruses - 496; Other Eukaryotes - 28379 (source: NCBI BLink). & (gnl|cdd|37248 : 124.0) no description available & (gnl|cdd|57943 : 108.0) no description available & (reliability: 420.0) & (original description: Putative At1g03830, Description = Putative ovule protein, PFAM = PF02263)' T '30.5' 'signalling.G-proteins' 'niben044scf00028604ctg005_10621-20558' '(at5g46070 : 873.0) Guanylate-binding family protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: immune response; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Guanylate-binding protein, N-terminal (InterPro:IPR015894), Guanylate-binding protein, C-terminal (InterPro:IPR003191); BEST Arabidopsis thaliana protein match is: guanylate-binding family protein (TAIR:AT1G03830.2); Has 135716 Blast hits to 74856 proteins in 3470 species: Archae - 1642; Bacteria - 27962; Metazoa - 58309; Fungi - 11332; Plants - 7596; Viruses - 496; Other Eukaryotes - 28379 (source: NCBI BLink). & (gnl|cdd|85935 : 216.0) no description available & (gnl|cdd|37248 : 158.0) no description available & (reliability: 1746.0) & (original description: Putative Os05g0563100, Description = Os05g0563100 protein, PFAM = PF02263;PF02841)' T '30.5' 'signalling.G-proteins' 'niben044scf00028604ctg006_1-2526' '(at5g46070 : 225.0) Guanylate-binding family protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: immune response; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Guanylate-binding protein, N-terminal (InterPro:IPR015894), Guanylate-binding protein, C-terminal (InterPro:IPR003191); BEST Arabidopsis thaliana protein match is: guanylate-binding family protein (TAIR:AT1G03830.2); Has 135716 Blast hits to 74856 proteins in 3470 species: Archae - 1642; Bacteria - 27962; Metazoa - 58309; Fungi - 11332; Plants - 7596; Viruses - 496; Other Eukaryotes - 28379 (source: NCBI BLink). & (reliability: 450.0) & (original description: Putative At5g46070, Description = Interferon-induced guanylate-binding protein 2, PFAM = )' T '30.5' 'signalling.G-proteins' 'niben044scf00029532ctg005_2762-10546' '(at1g31650 : 615.0) Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.; RHO guanyl-nucleotide exchange factor 14 (ROPGEF14); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 7 (TAIR:AT5G02010.1); Has 302 Blast hits to 301 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 302; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67377 : 501.0) no description available & (reliability: 1230.0) & (original description: Putative ROPGEF14, Description = Rop guanine nucleotide exchange factor 14, PFAM = PF03759)' T '30.5' 'signalling.G-proteins' 'niben044scf00029621ctg009_1-14351' '(at4g24580 : 610.0) Encodes a Rho GTPase-activating protein that interacts with ROP1 (a Rho GTPase) and regulates pollen tube development. This protein can be observed at the apical tip of growing pollen tubes and on endocytic vesicles traveling to this region of the pollen tube.; ROP1 ENHANCER 1 (REN1); CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Rho GTPase activation protein (RhoGAP) with PH domain (TAIR:AT5G12150.1); Has 23967 Blast hits to 18190 proteins in 1193 species: Archae - 153; Bacteria - 3871; Metazoa - 11779; Fungi - 2242; Plants - 901; Viruses - 71; Other Eukaryotes - 4950 (source: NCBI BLink). & (gnl|cdd|39472 : 327.0) no description available & (gnl|cdd|63840 : 114.0) no description available & (reliability: 1132.0) & (original description: Putative ROPGAP6, Description = Rho GTPase-activating protein 6, PFAM = PF00169;PF00620;PF14389)' T '30.5' 'signalling.G-proteins' 'niben044scf00032903ctg006_4562-11327' '(at4g27100 : 634.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT5G54780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37408 : 355.0) no description available & (gnl|cdd|47500 : 132.0) no description available & (reliability: 1268.0) & (original description: Putative Os07g0525400, Description = GTPase activating protein-like, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben044scf00033815ctg003_1-7958' '(at5g03530 : 333.0) Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. CFP:RabC2a appears to co-localize with peroxisomes.; RAB GTPase homolog C2A (RABC2A); FUNCTIONS IN: GTP binding, myosin XI tail binding, GTP-dependent protein binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction, regulation of transcription, DNA-dependent; LOCATED IN: peroxisome; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ras (InterPro:IPR013753), Small GTP-binding protein (InterPro:IPR005225), Ras GTPase (InterPro:IPR001806), Ras small GTPase, Rab type (InterPro:IPR003579), Small GTPase (InterPro:IPR020851), RNA polymerase sigma factor 54, interaction (InterPro:IPR002078), Rab18 (InterPro:IPR015598); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog C2B (TAIR:AT3G09910.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35303 : 304.0) no description available & (gnl|cdd|57949 : 262.0) no description available & (p36862|yptv3_volca : 201.0) GTP-binding protein yptV3 - Volvox carteri & (reliability: 666.0) & (original description: Putative RABC2A, Description = Ras-related protein RABC2a, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben044scf00034363ctg008_546-4152' '(at5g17790 : 114.0) Encodes a 85.9 kDa protein containing novel repeats and zinc fingers described as protein interaction domains. VAR3 is a part of a protein complex required for normal chloroplast and palisade cell development. Mutants display a variegated phenotype due to somatic areas lacking or containing developmentally retarded chloroplasts and greatly reduced numbers of palisade cells.; VARIEGATED 3 (VAR3); FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: chloroplast organization; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: zinc finger (Ran-binding) family protein (TAIR:AT1G55040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative BnaA03g06720D, Description = Zinc finger protein VAR3, chloroplastic, PFAM = )' T '30.5' 'signalling.G-proteins' 'niben044scf00036252ctg017_499-4722' '(at3g11490 : 328.0) rac GTPase activating protein; FUNCTIONS IN: Rac GTPase activator activity; INVOLVED IN: signal transduction; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095), Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198); BEST Arabidopsis thaliana protein match is: Rho GTPase activating protein with PAK-box/P21-Rho-binding domain (TAIR:AT5G22400.1); Has 4440 Blast hits to 4438 proteins in 184 species: Archae - 0; Bacteria - 0; Metazoa - 3286; Fungi - 515; Plants - 197; Viruses - 0; Other Eukaryotes - 442 (source: NCBI BLink). & (gnl|cdd|39471 : 240.0) no description available & (gnl|cdd|47652 : 108.0) no description available & (reliability: 656.0) & (original description: Putative pco061957, Description = Rho GTPase-activating protein gacA, PFAM = PF00620)' T '30.5' 'signalling.G-proteins' 'niben044scf00039647ctg004_1-6335' '(at2g23460 : 711.0) encodes a novel G-alpha protein that shares similarity to plant, yeast, and animal G-alpha proteins at the C-terminus. It contains an N-terminus that is as large as the C-terminus, is a member of a small family, and is expressed in all tissues examined, including roots, leaves, stems, flowers, and fruits.; extra-large G-protein 1 (XLG1); FUNCTIONS IN: signal transducer activity, guanyl nucleotide binding; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Guanine nucleotide binding protein (G-protein), alpha subunit (InterPro:IPR001019), G protein alpha subunit, helical insertion (InterPro:IPR011025); BEST Arabidopsis thaliana protein match is: extra-large GTP-binding protein 3 (TAIR:AT1G31930.3); Has 3427 Blast hits to 3422 proteins in 394 species: Archae - 0; Bacteria - 2; Metazoa - 2220; Fungi - 618; Plants - 355; Viruses - 0; Other Eukaryotes - 232 (source: NCBI BLink). & (gnl|cdd|35305 : 238.0) no description available & (gnl|cdd|57932 : 222.0) no description available & (p93163|gpa2_soybn : 146.0) Guanine nucleotide-binding protein alpha-2 subunit (GP-alpha-2) - Glycine max (Soybean) & (reliability: 1422.0) & (original description: Putative XLG1, Description = Extra-large guanine nucleotide-binding protein 1, PFAM = PF00503)' T '30.5' 'signalling.G-proteins' 'niben044scf00039776ctg003_1-4210' '(at3g07050 : 584.0) GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917), GNL3L/Grn1 putative GTPase (InterPro:IPR014813); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT1G52980.1); Has 11622 Blast hits to 10428 proteins in 1861 species: Archae - 158; Bacteria - 5948; Metazoa - 1715; Fungi - 910; Plants - 502; Viruses - 28; Other Eukaryotes - 2361 (source: NCBI BLink). & (gnl|cdd|37695 : 366.0) no description available & (gnl|cdd|57931 : 284.0) no description available & (reliability: 1168.0) & (original description: Putative NSN1, Description = Guanine nucleotide-binding protein-like NSN1, PFAM = PF01926)' T '30.5' 'signalling.G-proteins' 'niben044scf00040185ctg007_4623-8518' '(at5g58590 : 218.0) Encodes a Ran-binding protein 1 homolog (RanBP1).; RAN binding protein 1 (RANBP1); FUNCTIONS IN: protein binding; INVOLVED IN: protein import into nucleus, translocation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein 1 (InterPro:IPR000156), Pleckstrin homology-type (InterPro:IPR011993); BEST Arabidopsis thaliana protein match is: Pleckstrin homology (PH) domain superfamily protein (TAIR:AT2G30060.1); Has 1560 Blast hits to 1231 proteins in 240 species: Archae - 0; Bacteria - 8; Metazoa - 836; Fungi - 365; Plants - 158; Viruses - 15; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|29845 : 139.0) no description available & (gnl|cdd|36082 : 88.6) no description available & (reliability: 436.0) & (original description: Putative sbp1, Description = Ran-specific GTPase-activating protein, PFAM = PF00638)' T '30.5' 'signalling.G-proteins' 'niben044scf00040769ctg006_2843-11418' '(at3g54840 : 344.0) Encodes a novel Rab-like GTP-ase that is localized to the peripheral membrane of the endosome.; ARA6; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab5-related (InterPro:IPR015599); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT4G19640.1); Has 25937 Blast hits to 25894 proteins in 712 species: Archae - 24; Bacteria - 131; Metazoa - 13614; Fungi - 3531; Plants - 2862; Viruses - 20; Other Eukaryotes - 5755 (source: NCBI BLink). & (gnl|cdd|57946 : 273.0) no description available & (gnl|cdd|35315 : 236.0) no description available & (p29687|rab5_tobac : 217.0) Ras-related protein Rab5 - Nicotiana tabacum (Common tobacco) & (reliability: 688.0) & (original description: Putative RABF1, Description = Ras-related protein RABF1, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben044scf00041681ctg002_1-7640' '(at5g52580 : 256.0) RabGAP/TBC domain-containing protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195), Protein of unknown function DUF3548 (InterPro:IPR021935); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT4G27100.2). & (reliability: 512.0) & (original description: Putative umc2070, Description = RabGAP/TBC domain-containing protein, PFAM = PF12068)' T '30.5' 'signalling.G-proteins' 'niben044scf00042453ctg007_1924-3371' '(at1g52240 : 82.0) Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily .; RHO guanyl-nucleotide exchange factor 11 (ROPGEF11); CONTAINS InterPro DOMAIN/s: Dynein light chain, type 1/2 (InterPro:IPR001372); BEST Arabidopsis thaliana protein match is: Dynein light chain type 1 family protein (TAIR:AT3G16120.1); Has 1254 Blast hits to 1252 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 666; Fungi - 103; Plants - 255; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative KPP, Description = Rop guanine nucleotide exchange factor, PFAM = PF03759)' T '30.5' 'signalling.G-proteins' 'niben044scf00042866ctg000_1-11783' '(at4g03100 : 451.0) Rho GTPase activating protein with PAK-box/P21-Rho-binding domain; FUNCTIONS IN: Rac GTPase activator activity; INVOLVED IN: signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095), Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198); BEST Arabidopsis thaliana protein match is: Rho GTPase activating protein with PAK-box/P21-Rho-binding domain (TAIR:AT5G22400.1); Has 3907 Blast hits to 3903 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 2865; Fungi - 460; Plants - 187; Viruses - 0; Other Eukaryotes - 395 (source: NCBI BLink). & (gnl|cdd|39471 : 286.0) no description available & (gnl|cdd|63840 : 106.0) no description available & (reliability: 902.0) & (original description: Putative ROPGAP2, Description = Rho GTPase-activating protein 2, PFAM = PF00786;PF00620)' T '30.5' 'signalling.G-proteins' 'niben044scf00042991ctg009_67-7485' '(at4g13350 : 224.0) Encodes a GTPase that interacts with nuclear shuttle proteins (NSPs) from a number of different plant viruses. The gene is widely expressed and NIG transcript levels do not rise in response to viral infection. This cytoplasmic protein does not directly interact with a viral movement protein (MP), but, it does promote the movement of NSP from the nucleus to the cytoplasm. Overexpression of NIG in Arabidopsis plants renders them more sensitive to geminivirus infection.; NSP (nuclear shuttle protein)-interacting GTPase (NIG); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: nucleocytoplasmic transport, response to virus; LOCATED IN: cytosol, cytoplasm; EXPRESSED IN: flower, root, cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ArfGap/RecO-like zinc finger domain-containing protein (TAIR:AT4G32630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35921 : 123.0) no description available & (reliability: 448.0) & (original description: Putative BnaCnng14610D, Description = BnaCnng14610D protein, PFAM = PF01412)' T '30.5' 'signalling.G-proteins' 'niben044scf00044490ctg001_1-12036' '(at3g55020 : 825.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G39280.1); Has 8291 Blast hits to 7654 proteins in 526 species: Archae - 15; Bacteria - 632; Metazoa - 4273; Fungi - 1225; Plants - 609; Viruses - 33; Other Eukaryotes - 1504 (source: NCBI BLink). & (gnl|cdd|37269 : 258.0) no description available & (gnl|cdd|47500 : 172.0) no description available & (reliability: 1650.0) & (original description: Putative At3g55020, Description = RabGAP/TBC domain-containing protein, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben044scf00045495ctg005_4659-6998' '(at5g56230 : 142.0) prenylated RAB acceptor 1.G2 (PRA1.G2); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: prenylated RAB acceptor 1.G1 (TAIR:AT1G55640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38352 : 140.0) no description available & (gnl|cdd|86276 : 109.0) no description available & (reliability: 284.0) & (original description: Putative PRA1G2, Description = PRA1 family protein G2, PFAM = PF03208)' T '30.5' 'signalling.G-proteins' 'niben044scf00045685ctg006_1791-10026' '(at4g05410 : 472.0) Encodes a nucleolar protein with seven WD40-repeats that plays a role in embryo sac development and is critical for the correct positioning of the division plane of zygote and the apical cell lineage in Arabidopsis. YAO may act by modulating nucleolar function, such as rRNA biogenesis, during early embryogenesis and gametogenesis.; YAOZHE (YAO); FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: acceptance of pollen, mitochondrial fission, embryo sac development, embryo development ending in seed dormancy; LOCATED IN: nucleolus, anaphase-promoting complex, small nucleolar ribonucleoprotein complex, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G21130.1); Has 47131 Blast hits to 24802 proteins in 761 species: Archae - 50; Bacteria - 6358; Metazoa - 18156; Fungi - 10195; Plants - 5539; Viruses - 94; Other Eukaryotes - 6739 (source: NCBI BLink). & (gnl|cdd|35520 : 459.0) no description available & (gnl|cdd|29257 : 141.0) no description available & (o24076|gblp_medsa : 87.4) Guanine nucleotide-binding protein subunit beta-like protein - Medicago sativa (Alfalfa) & (reliability: 944.0) & (original description: Putative YAO, Description = U3 snoRNP-associated protein-like YAO, PFAM = PF00400;PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'niben044scf00047399ctg002_2874-9061' '(at4g38430 : 554.0) Member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily, also known as DUF315). Interacts with ROP1 but the whole protein lacks Rho guanyl-nucleotide exchange factor activity in vitro. The DUF315/PRONE domain is sufficient to confer RopGEF catalytic activity.; rho guanyl-nucleotide exchange factor 1 (ROPGEF1); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 7 (TAIR:AT5G02010.1); Has 308 Blast hits to 304 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 308; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67377 : 468.0) no description available & (reliability: 1108.0) & (original description: Putative ROPGEF1, Description = Rop guanine nucleotide exchange factor 1, PFAM = PF03759)' T '30.5' 'signalling.G-proteins' 'niben044scf00048017ctg000_1-5686' '(p29687|rab5_tobac : 365.0) Ras-related protein Rab5 - Nicotiana tabacum (Common tobacco) & (at5g45130 : 307.0) small GTP binding protein; RAB homolog 1 (RHA1); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab5-related (InterPro:IPR015599); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT4G19640.1); Has 26267 Blast hits to 26237 proteins in 716 species: Archae - 26; Bacteria - 136; Metazoa - 13722; Fungi - 3681; Plants - 2979; Viruses - 20; Other Eukaryotes - 5703 (source: NCBI BLink). & (gnl|cdd|57946 : 285.0) no description available & (gnl|cdd|35315 : 273.0) no description available & (reliability: 614.0) & (original description: Putative RAB5, Description = Ras-related protein Rab5, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben044scf00051393ctg000_15883-19211' '(at1g52380 : 249.0) NUP50 (Nucleoporin 50 kDa) protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular transport; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein 1 (InterPro:IPR000156), Pleckstrin homology-type (InterPro:IPR011993), Nuclear pore complex, NUP2/50/61 (InterPro:IPR015007); BEST Arabidopsis thaliana protein match is: NUP50 (Nucleoporin 50 kDa) protein (TAIR:AT3G15970.1); Has 1614 Blast hits to 1303 proteins in 238 species: Archae - 0; Bacteria - 48; Metazoa - 835; Fungi - 410; Plants - 179; Viruses - 3; Other Eukaryotes - 139 (source: NCBI BLink). & (gnl|cdd|29845 : 104.0) no description available & (reliability: 498.0) & (original description: Putative NUP50B, Description = Nuclear pore complex protein NUP50B, PFAM = PF00638;PF08911)' T '30.5' 'signalling.G-proteins' 'niben044scf00054520ctg000_1-9350' '(at1g31930 : 806.0) Encodes XLG3 (extra-large G protein 3) that shows significant similarity to the G protein alpha subunit in its C terminal region. Involved in the regulation of root morphological and growth responses.; extra-large GTP-binding protein 3 (XLG3); FUNCTIONS IN: signal transducer activity, guanyl nucleotide binding; INVOLVED IN: in 11 processes; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Guanine nucleotide binding protein (G-protein), alpha subunit (InterPro:IPR001019), G protein alpha subunit, helical insertion (InterPro:IPR011025); BEST Arabidopsis thaliana protein match is: extra-large G-protein 1 (TAIR:AT2G23460.1). & (gnl|cdd|35305 : 153.0) no description available & (gnl|cdd|57932 : 148.0) no description available & (p93163|gpa2_soybn : 92.4) Guanine nucleotide-binding protein alpha-2 subunit (GP-alpha-2) - Glycine max (Soybean) & (reliability: 1612.0) & (original description: Putative gpa-2, Description = Guanine nucleotide-binding protein alpha-2 subunit, PFAM = PF00503)' T '30.5' 'signalling.G-proteins' 'niben044scf00055868ctg000_18260-27348' '(at1g50300 : 313.0) TBP-associated factor 15 (TAF15); FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: TBP-associated factor 15B (TAIR:AT5G58470.2); Has 11021 Blast hits to 6677 proteins in 384 species: Archae - 8; Bacteria - 254; Metazoa - 5533; Fungi - 1360; Plants - 1875; Viruses - 14; Other Eukaryotes - 1977 (source: NCBI BLink). & (gnl|cdd|37206 : 99.7) no description available & (reliability: 626.0) & (original description: Putative TAF15, Description = Transcription initiation factor TFIID subunit 15, PFAM = PF00641;PF00641;PF00076)' T '30.5' 'signalling.G-proteins' 'niben101scf00046_798462-809798' '(at5g39960 : 653.0) GTP binding;GTP binding; FUNCTIONS IN: GTP binding; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding, EngA (InterPro:IPR016484), Small GTP-binding protein (InterPro:IPR005225), GTP1/OBG (InterPro:IPR006073), Guanylate kinase (InterPro:IPR008144), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT3G12080.1); Has 25797 Blast hits to 22413 proteins in 2944 species: Archae - 203; Bacteria - 19262; Metazoa - 305; Fungi - 220; Plants - 200; Viruses - 0; Other Eukaryotes - 5607 (source: NCBI BLink). & (gnl|cdd|80507 : 400.0) no description available & (gnl|cdd|36405 : 325.0) no description available & (reliability: 1306.0) & (original description: Putative der, Description = GTPase Der, PFAM = PF01926;PF01926;PF14714)' T '30.5' 'signalling.G-proteins' 'niben101scf00046_806347-809813' '(at5g39960 : 251.0) GTP binding;GTP binding; FUNCTIONS IN: GTP binding; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding, EngA (InterPro:IPR016484), Small GTP-binding protein (InterPro:IPR005225), GTP1/OBG (InterPro:IPR006073), Guanylate kinase (InterPro:IPR008144), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT3G12080.1); Has 25797 Blast hits to 22413 proteins in 2944 species: Archae - 203; Bacteria - 19262; Metazoa - 305; Fungi - 220; Plants - 200; Viruses - 0; Other Eukaryotes - 5607 (source: NCBI BLink). & (gnl|cdd|80507 : 172.0) no description available & (gnl|cdd|36405 : 118.0) no description available & (reliability: 502.0) & (original description: Putative der, Description = GTP-binding protein EngA, PFAM = PF01926)' T '30.5' 'signalling.G-proteins' 'niben101scf00050_84042-87866' '(o04369|rac1_lotja : 238.0) Rac-like GTP-binding protein RAC1 - Lotus japonicus & (at3g51300 : 236.0) Encodes a pollen-specific Rop GTPase, member of the Rho family of small GTP binding proteins that interacts with RIC3 and RIC4 to control tip growth in pollen tubes. These three proteins promote the proper targeting of exocytic vesicles in the pollen tube tip. ROP1 activity is regulated by the REN1 GTPase activator protein.; RHO-related protein from plants 1 (ROP1); CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: Arabidopsis RAC-like 1 (TAIR:AT2G17800.2); Has 24331 Blast hits to 24300 proteins in 680 species: Archae - 9; Bacteria - 65; Metazoa - 12719; Fungi - 3503; Plants - 2700; Viruses - 20; Other Eukaryotes - 5315 (source: NCBI BLink). & (gnl|cdd|58016 : 223.0) no description available & (gnl|cdd|35614 : 207.0) no description available & (reliability: 472.0) & (original description: Putative rac1, Description = Ras-related C3 botulinum toxin substrate 1, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf00080_50098-62911' '(at4g07410 : 948.0) Transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT1G27470.1); Has 10654 Blast hits to 6476 proteins in 452 species: Archae - 14; Bacteria - 3757; Metazoa - 2166; Fungi - 2748; Plants - 788; Viruses - 0; Other Eukaryotes - 1181 (source: NCBI BLink). & (gnl|cdd|37259 : 483.0) no description available & (gnl|cdd|29257 : 83.1) no description available & (reliability: 1896.0) & (original description: Putative At1g27470, Description = Putative uncharacterized protein At1g27470, PFAM = PF00400)' T '30.5' 'signalling.G-proteins' 'niben101scf00121_11950-18180' '(p93340|gblp_nicpl : 594.0) Guanine nucleotide-binding protein subunit beta-like protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g18080 : 529.0) Encodes the Arabidopsis thaliana homolog of the tobacco WD-40 repeat ArcA gene.; ATARCA; FUNCTIONS IN: nucleotide binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosolic ribosome, chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B (TAIR:AT1G48630.1); Has 86693 Blast hits to 36128 proteins in 955 species: Archae - 98; Bacteria - 10140; Metazoa - 33986; Fungi - 19643; Plants - 11429; Viruses - 3; Other Eukaryotes - 11394 (source: NCBI BLink). & (gnl|cdd|35500 : 449.0) no description available & (gnl|cdd|29257 : 230.0) no description available & (reliability: 1040.0) & (original description: Putative ARCA, Description = Guanine nucleotide-binding protein subunit beta-like protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'niben101scf00138_94927-167866' '(at3g43300 : 2308.0) AtMIN7 is an immunity associated Arabidopsis protein targeted by HopM1, a conserved Pseudomonas syringae virulence protein. AtMIN7 encodes one of the eight members of the Arabidopsis adenosine diphosphate (ADP) ribosylation factor (ARF) guanine nucleotide exchange factor (GEF) protein family. The AFR GEF proteins are key components of the vesicle trafficking system in eukaryotic cells. HopM1 mediates the destruction of AtMIN7 via the host proteasome.; HOPM interactor 7 (ATMIN7); CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904), Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF1981, SEC7 associated (InterPro:IPR015403); BEST Arabidopsis thaliana protein match is: SEC7-like guanine nucleotide exchange family protein (TAIR:AT1G01960.1). & (gnl|cdd|36147 : 1144.0) no description available & (gnl|cdd|34895 : 257.0) no description available & (reliability: 4616.0) & (original description: Putative BIG5, Description = Brefeldin A-inhibited guanine nucleotide-exchange protein 5, PFAM = PF12783;PF16213;PF09324;PF01369)' T '30.5' 'signalling.G-proteins' 'niben101scf00143_242564-251754' '(gnl|cdd|57955 : 247.0) no description available & (gnl|cdd|35307 : 241.0) no description available & (at3g11730 : 234.0) Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. It has also been identified as an isoprenylated protein.; ATFP8; FUNCTIONS IN: GTP binding, myosin XI tail binding, GTP-dependent protein binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 1A (TAIR:AT5G47200.1); Has 29795 Blast hits to 29734 proteins in 779 species: Archae - 25; Bacteria - 142; Metazoa - 15645; Fungi - 4180; Plants - 3599; Viruses - 20; Other Eukaryotes - 6184 (source: NCBI BLink). & (p40392|ric1_orysa : 231.0) Ras-related protein RIC1 - Oryza sativa (Rice) & (reliability: 468.0) & (original description: Putative YPT1, Description = GTP-binding protein YPT1, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf00146_209899-213101' '(at5g50120 : 369.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G24130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29257 : 133.0) no description available & (gnl|cdd|35495 : 94.3) no description available & (reliability: 738.0) & (original description: Putative At5g50120, Description = Similarity to GTP-binding regulatory protein and WD-repeat protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'niben101scf00157_507141-513680' '(at4g27100 : 643.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT5G54780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37408 : 353.0) no description available & (gnl|cdd|47500 : 134.0) no description available & (reliability: 1286.0) & (original description: Putative At2g20440, Description = Putative ovule protein, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben101scf00196_5971-14745' '(at3g63150 : 816.0) Encodes a calcium binding GTPases that is localized to the mitochondrion and is involved in salt stress response.; MIRO-related GTP-ase 2 (MIRO2); CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF hand associated, type-1 (InterPro:IPR013566), EF hand associated, type-2 (InterPro:IPR013567), Mitochondrial Rho-like (InterPro:IPR013684), Small GTPase, Rho type (InterPro:IPR003578), Ras GTPase (InterPro:IPR001806), Ras small GTPase, Rab type (InterPro:IPR003579), Mitochondrial Rho GTPase (InterPro:IPR021181), EF-HAND 2 (InterPro:IPR018249), MIRO (InterPro:IPR020860); BEST Arabidopsis thaliana protein match is: MIRO-related GTP-ase 1 (TAIR:AT5G27540.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36919 : 741.0) no description available & (gnl|cdd|57976 : 242.0) no description available & (reliability: 1632.0) & (original description: Putative MIRO2, Description = Mitochondrial Rho GTPase 2, PFAM = PF08355;PF00071;PF00071;PF08356)' T '30.5' 'signalling.G-proteins' 'niben101scf00225_817919-827422' '(at3g49350 : 574.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT5G24390.1); Has 4289 Blast hits to 3657 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 2316; Fungi - 775; Plants - 693; Viruses - 0; Other Eukaryotes - 505 (source: NCBI BLink). & (gnl|cdd|37408 : 343.0) no description available & (gnl|cdd|47500 : 121.0) no description available & (reliability: 1148.0) & (original description: Putative BnaUnng00190D, Description = BnaUnng00190D protein, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben101scf00270_1206706-1211636' '(at2g43120 : 421.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: stem, flower; CONTAINS InterPro DOMAIN/s: Pirin, C-terminal (InterPro:IPR008778), Pirin (InterPro:IPR012093), Cupin, RmlC-type (InterPro:IPR011051), Pirin, N-terminal (InterPro:IPR003829); BEST Arabidopsis thaliana protein match is: pirin (TAIR:AT3G59220.1); Has 7357 Blast hits to 7357 proteins in 1454 species: Archae - 66; Bacteria - 4603; Metazoa - 71; Fungi - 219; Plants - 125; Viruses - 0; Other Eukaryotes - 2273 (source: NCBI BLink). & (gnl|cdd|31927 : 222.0) no description available & (reliability: 764.0) & (original description: Putative yhhW, Description = Quercetin 2,3-dioxygenase, PFAM = PF02678;PF05726)' T '30.5' 'signalling.G-proteins' 'niben101scf00314_137085-156032' '(at3g07880 : 175.0) SUPERCENTIPEDE1 (SCN1); FUNCTIONS IN: Rho GDP-dissociation inhibitor activity; INVOLVED IN: root epidermal cell differentiation, cell tip growth; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), RHO protein GDP dissociation inhibitor (InterPro:IPR000406); BEST Arabidopsis thaliana protein match is: Immunoglobulin E-set superfamily protein (TAIR:AT1G62450.1); Has 660 Blast hits to 660 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 325; Fungi - 162; Plants - 120; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|38415 : 165.0) no description available & (gnl|cdd|65863 : 104.0) no description available & (reliability: 350.0) & (original description: Putative RhoGDI1, Description = Rho guanine dissociation inhibitor, PFAM = PF02115)' T '30.5' 'signalling.G-proteins' 'niben101scf00331_201516-260183' '(at5g06120 : 1457.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04490.1). & (gnl|cdd|36624 : 1265.0) no description available & (reliability: 2914.0) & (original description: Putative mot59, Description = Putative uncharacterized protein mot59, PFAM = PF03810)' T '30.5' 'signalling.G-proteins' 'niben101scf00332_506271-510680' '(at4g02080 : 353.0) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.; secretion-associated RAS super family 2 (SAR2); FUNCTIONS IN: GTP binding; INVOLVED IN: intracellular protein transport; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT3G62560.1); Has 6784 Blast hits to 6782 proteins in 374 species: Archae - 2; Bacteria - 40; Metazoa - 3245; Fungi - 1245; Plants - 1081; Viruses - 0; Other Eukaryotes - 1171 (source: NCBI BLink). & (o04266|sar1a_bracm : 349.0) GTP-binding protein SAR1A - Brassica campestris (Field mustard) & (gnl|cdd|35300 : 329.0) no description available & (gnl|cdd|57938 : 327.0) no description available & (reliability: 706.0) & (original description: Putative SAR1A, Description = GTP-binding protein SAR1A, PFAM = PF00025)' T '30.5' 'signalling.G-proteins' 'niben101scf00339_714665-723577' '(at5g39900 : 986.0) Small GTP-binding protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein LepA (InterPro:IPR006297), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), GTP-binding protein LepA, C-terminal (InterPro:IPR013842), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Small GTP-binding protein (TAIR:AT5G08650.1); Has 79800 Blast hits to 74702 proteins in 10641 species: Archae - 1192; Bacteria - 44258; Metazoa - 8966; Fungi - 6189; Plants - 1305; Viruses - 1; Other Eukaryotes - 17889 (source: NCBI BLink). & (gnl|cdd|81586 : 901.0) no description available & (gnl|cdd|35683 : 892.0) no description available & (o23755|ef2_betvu : 101.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (reliability: 1972.0) & (original description: Putative guf1, Description = EF-4, PFAM = PF00679;PF00009;PF06421)' T '30.5' 'signalling.G-proteins' 'niben101scf00349_96093-99400' '(at3g15680 : 136.0) Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT5G25490.1); Has 1825 Blast hits to 997 proteins in 170 species: Archae - 0; Bacteria - 2; Metazoa - 978; Fungi - 140; Plants - 475; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|39399 : 110.0) no description available & (reliability: 272.0) & (original description: Putative At3g15680, Description = At3g15680, PFAM = PF00641;PF00641;PF00641)' T '30.5' 'signalling.G-proteins' 'niben101scf00391_16918-27768' '(at4g27100 : 657.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT5G54780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37408 : 371.0) no description available & (gnl|cdd|47500 : 133.0) no description available & (reliability: 1314.0) & (original description: Putative At4g27100, Description = Putative uncharacterized protein At4g27100, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben101scf00397_1093442-1100830' '(at5g09550 : 775.0) GDP dissociation inhibitor family protein / Rab GTPase activator family protein; FUNCTIONS IN: RAB GDP-dissociation inhibitor activity; INVOLVED IN: regulation of GTPase activity, protein transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Rab GTPase activator (InterPro:IPR002005), GDP dissociation inhibitor (InterPro:IPR018203), Rab GDI protein (InterPro:IPR000806); BEST Arabidopsis thaliana protein match is: RAB GDP dissociation inhibitor 2 (TAIR:AT3G59920.1); Has 1326 Blast hits to 1219 proteins in 259 species: Archae - 2; Bacteria - 4; Metazoa - 658; Fungi - 290; Plants - 182; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (gnl|cdd|64840 : 691.0) no description available & (gnl|cdd|36652 : 630.0) no description available & (reliability: 1550.0) & (original description: Putative gdi, Description = Rab GDP dissociation inhibitor alpha, PFAM = PF00996)' T '30.5' 'signalling.G-proteins' 'niben101scf00402_244464-252733' '(at5g15930 : 500.0) Encodes a putative plant adhesion molecule.; plant adhesion molecule 1 (PAM1); FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT3G02460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36318 : 234.0) no description available & (gnl|cdd|47500 : 189.0) no description available & (reliability: 986.0) & (original description: Putative Os08g0412600, Description = Os08g0412600 protein, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben101scf00449_474371-481260' '(at3g46060 : 323.0) small GTP-binding protein (ara-3); ARA3; FUNCTIONS IN: GTP binding; INVOLVED IN: ethylene mediated signaling pathway; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT5G59840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35301 : 314.0) no description available & (gnl|cdd|57953 : 309.0) no description available & (q39433|rb1bv_betvu : 307.0) Ras-related protein RAB1BV - Beta vulgaris (Sugar beet) & (reliability: 646.0) & (original description: Putative RABE1C, Description = Ras-related protein RABE1c, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf00457_485373-495438' '(at5g03530 : 330.0) Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. CFP:RabC2a appears to co-localize with peroxisomes.; RAB GTPase homolog C2A (RABC2A); FUNCTIONS IN: GTP binding, myosin XI tail binding, GTP-dependent protein binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction, regulation of transcription, DNA-dependent; LOCATED IN: peroxisome; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ras (InterPro:IPR013753), Small GTP-binding protein (InterPro:IPR005225), Ras GTPase (InterPro:IPR001806), Ras small GTPase, Rab type (InterPro:IPR003579), Small GTPase (InterPro:IPR020851), RNA polymerase sigma factor 54, interaction (InterPro:IPR002078), Rab18 (InterPro:IPR015598); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog C2B (TAIR:AT3G09910.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35303 : 300.0) no description available & (gnl|cdd|57949 : 260.0) no description available & (p36862|yptv3_volca : 196.0) GTP-binding protein yptV3 - Volvox carteri & (reliability: 660.0) & (original description: Putative RABC2A, Description = Ras-related protein RABC2a, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf00463_71852-78285' '(q01111|ypt3_nicpl : 421.0) Ras-related protein YPT3 - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g06400 : 347.0) small GTP-binding protein (ara-2); ARA-2; FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1C (TAIR:AT5G45750.1); Has 26542 Blast hits to 26487 proteins in 734 species: Archae - 28; Bacteria - 140; Metazoa - 13950; Fungi - 3642; Plants - 2996; Viruses - 20; Other Eukaryotes - 5766 (source: NCBI BLink). & (gnl|cdd|35310 : 339.0) no description available & (gnl|cdd|57954 : 315.0) no description available & (reliability: 694.0) & (original description: Putative YPT3, Description = Ras-related protein YPT3, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf00495_55768-121922' '(at3g05010 : 303.0) Protein of unknown function, transmembrane-40; CONTAINS InterPro DOMAIN/s: Protein of unknown function, transmembrane-40 (InterPro:IPR018781); BEST Arabidopsis thaliana protein match is: Protein of unknown function, transmembrane-40 (TAIR:AT5G27210.1); Has 134 Blast hits to 134 proteins in 47 species: Archae - 0; Bacteria - 6; Metazoa - 78; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|39736 : 243.0) no description available & (reliability: 606.0) & (original description: Putative At3g05010, Description = Candidate G-protein coupled receptor 2, PFAM = PF10160)' T '30.5' 'signalling.G-proteins' 'niben101scf00497_834451-850776' '(at5g13300 : 1125.0) Belongs to 15-member small GTPase gene family, ARF-GAP domain proteins (AGD); corresponds to AGD3, and is one of four proteins belonging to class 1, together with AGD1, AGD2 and AGD4. The protein contains four domains: BAR domain, PH domain, an ARF-GAP domain, and two Ankyrin repeats. In sfc mutants, the secondary and tertiary veins of cotyledons, leaves, sepals and petals are largely replaced by small segments of discontinuous veins. sfc mutants have exaggerated responses to auxin.; SCARFACE (SFC); FUNCTIONS IN: ARF GTPase activator activity, phosphoinositide binding; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, phloem or xylem histogenesis, leaf morphogenesis; LOCATED IN: cytosol, trans-Golgi network transport vesicle, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), Pleckstrin homology-type (InterPro:IPR011993), Ankyrin repeat-containing domain (InterPro:IPR020683), BAR (InterPro:IPR004148), Pleckstrin homology (InterPro:IPR001849), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 1 (TAIR:AT5G61980.1); Has 64753 Blast hits to 27558 proteins in 1221 species: Archae - 110; Bacteria - 5131; Metazoa - 34265; Fungi - 4887; Plants - 2591; Viruses - 654; Other Eukaryotes - 17115 (source: NCBI BLink). & (gnl|cdd|35741 : 560.0) no description available & (gnl|cdd|85433 : 130.0) no description available & (reliability: 2250.0) & (original description: Putative AGD3, Description = ADP-ribosylation factor GTPase-activating protein AGD3, PFAM = PF12796;PF00169;PF16746;PF01412)' T '30.5' 'signalling.G-proteins' 'niben101scf00644_45644-50700' '(at1g73640 : 290.0) RAB GTPase homolog A6A (RABA6a); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A6B (TAIR:AT1G18200.1); Has 27212 Blast hits to 27171 proteins in 728 species: Archae - 24; Bacteria - 131; Metazoa - 14579; Fungi - 3674; Plants - 3000; Viruses - 20; Other Eukaryotes - 5784 (source: NCBI BLink). & (gnl|cdd|35310 : 279.0) no description available & (gnl|cdd|57954 : 272.0) no description available & (q40521|rb11b_tobac : 234.0) Ras-related protein Rab11B - Nicotiana tabacum (Common tobacco) & (reliability: 580.0) & (original description: Putative RABA6A, Description = Ras-related protein RABA6a, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf00648_4089-12423' '(at3g54840 : 333.0) Encodes a novel Rab-like GTP-ase that is localized to the peripheral membrane of the endosome.; ARA6; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab5-related (InterPro:IPR015599); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT4G19640.1); Has 25937 Blast hits to 25894 proteins in 712 species: Archae - 24; Bacteria - 131; Metazoa - 13614; Fungi - 3531; Plants - 2862; Viruses - 20; Other Eukaryotes - 5755 (source: NCBI BLink). & (gnl|cdd|57946 : 275.0) no description available & (gnl|cdd|35315 : 237.0) no description available & (p29687|rab5_tobac : 210.0) Ras-related protein Rab5 - Nicotiana tabacum (Common tobacco) & (reliability: 666.0) & (original description: Putative RABF1, Description = Ras-related protein RABF1, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf00684_26907-37017' '(at3g53610 : 325.0) GTPase AtRAB8 (atrab8); RAB GTPase homolog 8 (RAB8); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT5G59840.1); Has 29736 Blast hits to 29676 proteins in 811 species: Archae - 22; Bacteria - 184; Metazoa - 15446; Fungi - 4267; Plants - 3567; Viruses - 20; Other Eukaryotes - 6230 (source: NCBI BLink). & (gnl|cdd|35301 : 316.0) no description available & (gnl|cdd|57953 : 309.0) no description available & (q39433|rb1bv_betvu : 308.0) Ras-related protein RAB1BV - Beta vulgaris (Sugar beet) & (reliability: 650.0) & (original description: Putative RABE1C, Description = Ras-related protein RABE1c, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf00684_270769-286373' '(at1g43890 : 175.0) ras-related small GTPase; RAB GTPASE HOMOLOG B18 (RAB18); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab18 (InterPro:IPR015598); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog C2A (TAIR:AT5G03530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35303 : 164.0) no description available & (gnl|cdd|57949 : 163.0) no description available & (p36862|yptv3_volca : 119.0) GTP-binding protein yptV3 - Volvox carteri & (reliability: 350.0) & (original description: Putative rab18, Description = Ras-related protein Rab-18, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf00792_131505-140925' '(at5g03530 : 301.0) Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. CFP:RabC2a appears to co-localize with peroxisomes.; RAB GTPase homolog C2A (RABC2A); FUNCTIONS IN: GTP binding, myosin XI tail binding, GTP-dependent protein binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction, regulation of transcription, DNA-dependent; LOCATED IN: peroxisome; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ras (InterPro:IPR013753), Small GTP-binding protein (InterPro:IPR005225), Ras GTPase (InterPro:IPR001806), Ras small GTPase, Rab type (InterPro:IPR003579), Small GTPase (InterPro:IPR020851), RNA polymerase sigma factor 54, interaction (InterPro:IPR002078), Rab18 (InterPro:IPR015598); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog C2B (TAIR:AT3G09910.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35303 : 278.0) no description available & (gnl|cdd|57949 : 253.0) no description available & (p36862|yptv3_volca : 200.0) GTP-binding protein yptV3 - Volvox carteri & (reliability: 602.0) & (original description: Putative RABC2A, Description = Ras-related protein RABC2a, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf00811_1021334-1027195' '(at3g07890 : 658.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G37290.1); Has 5103 Blast hits to 5093 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 2600; Fungi - 1061; Plants - 534; Viruses - 0; Other Eukaryotes - 908 (source: NCBI BLink). & (gnl|cdd|37269 : 295.0) no description available & (gnl|cdd|47500 : 193.0) no description available & (reliability: 1316.0) & (original description: Putative At3g07890, Description = At3g07890, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben101scf00822_168429-172665' '(at5g10260 : 370.0) RAB GTPase homolog H1E (RABH1e); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab6-related (InterPro:IPR015600); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog H1D (TAIR:AT2G22290.1); Has 27017 Blast hits to 26988 proteins in 737 species: Archae - 21; Bacteria - 160; Metazoa - 14299; Fungi - 3762; Plants - 2966; Viruses - 20; Other Eukaryotes - 5789 (source: NCBI BLink). & (gnl|cdd|35317 : 334.0) no description available & (gnl|cdd|57947 : 297.0) no description available & (p31583|rhn1_nicpl : 151.0) Ras-related protein RHN1 - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 740.0) & (original description: Putative ryh1, Description = GTP-binding protein ryh1, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf00887_592909-600416' '(at3g17660 : 177.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes; AGD15 belongs to the class 4, together with AGD14.; ARF-GAP domain 15 (AGD15); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 5 (TAIR:AT5G54310.1); Has 3532 Blast hits to 3530 proteins in 241 species: Archae - 0; Bacteria - 0; Metazoa - 1821; Fungi - 633; Plants - 551; Viruses - 0; Other Eukaryotes - 527 (source: NCBI BLink). & (gnl|cdd|35922 : 129.0) no description available & (gnl|cdd|85433 : 123.0) no description available & (reliability: 354.0) & (original description: Putative smap1, Description = Stromal membrane-associated protein 1, PFAM = PF01412)' T '30.5' 'signalling.G-proteins' 'niben101scf00895_46063-56034' '(at4g27540 : 222.0) prenylated RAB acceptor 1.H (PRA1.H); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 444.0) & (original description: Putative PRA1H, Description = PRA1 family protein H, PFAM = PF03208)' T '30.5' 'signalling.G-proteins' 'niben101scf00944_762873-767891' '(at1g04450 : 84.3) Encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). It interacts with Rop1 and is involved in pollen tube growth and function, and exocytosis in the pollen tube tip. The protein most similar to RIC1 (family subgroup III). Gene is expressed predominantly in inflorescence and flower tissue. Interacts with ROP1 to modulate calcium ion influxes required to generate tip-focused calcium gradients.It; ROP-interactive CRIB motif-containing protein 3 (RIC3); FUNCTIONS IN: protein binding; INVOLVED IN: in 7 processes; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095); BEST Arabidopsis thaliana protein match is: ROP-interactive CRIB motif-containing protein 1 (TAIR:AT2G33460.1); Has 189 Blast hits to 189 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative EFTS, Description = CRIB domain-containing protein RIC10, PFAM = PF00786)' T '30.5' 'signalling.G-proteins' 'niben101scf00961_112834-129651' '(at2g38840 : 996.0) Guanylate-binding family protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: immune response; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Guanylate-binding protein, N-terminal (InterPro:IPR015894), Guanylate-binding protein, C-terminal (InterPro:IPR003191); BEST Arabidopsis thaliana protein match is: Guanylate-binding family protein (TAIR:AT5G46070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|57943 : 170.0) no description available & (gnl|cdd|37248 : 97.3) no description available & (reliability: 1992.0) & (original description: Putative BnaC03g21700D, Description = BnaC03g21700D protein, PFAM = PF02841;PF02263)' T '30.5' 'signalling.G-proteins' 'niben101scf00985_606183-609245' '(at3g12160 : 358.0) Encodes RABA4D, a member of the Arabidopsis RabA4 subfamily of Rab GTPase proteins. It is transported in exocytic vesicles to the apical tip of pollen tubes where it appears to promote tip growth. Proper localization of RabA4d depends on ROP1, RIC3, and RIC4 activity.; RAB GTPase homolog A4D (RABA4D); FUNCTIONS IN: GTP binding; INVOLVED IN: regulation of pollen tube growth, pollen tube growth, pollen tube development; LOCATED IN: exocytic vesicle, apical part of cell; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A4C (TAIR:AT5G47960.1); Has 28921 Blast hits to 28882 proteins in 778 species: Archae - 24; Bacteria - 155; Metazoa - 15072; Fungi - 4263; Plants - 3370; Viruses - 20; Other Eukaryotes - 6017 (source: NCBI BLink). & (p25766|rgp1_orysa : 345.0) Ras-related protein RGP1 (GTP-binding regulatory protein RGP1) - Oryza sativa (Rice) & (gnl|cdd|35310 : 324.0) no description available & (gnl|cdd|57954 : 310.0) no description available & (reliability: 716.0) & (original description: Putative RABA4D, Description = Ras-related protein RABA4d, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf00988_688466-703079' '(p93398|gbb2_tobac : 726.0) Guanine nucleotide-binding protein subunit beta 2 - Nicotiana tabacum (Common tobacco) & (at4g34460 : 600.0) Encodes the heterotrimeric G-protein beta subunit and is involved in organ shape. A significant fraction of the protein is found in the ER. Mutants carrying null alleles express similar fruit phenotypes, as seen in er plants, but differ from er in that the stem is only slightly shorter than that in the wild type, the pedicel is slightly longer than that in the wild type, and the leaves are rounder than those in er mutants. Gene is expressed in all tissues examined, with highest expression level found in siliques. It is involved in resistance to Plectosphaerella cucumerina. The predicted protein has two DWD motifs. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase; GTP binding protein beta 1 (AGB1); FUNCTIONS IN: protein binding, GTPase activity, nucleotide binding; INVOLVED IN: in 11 processes; LOCATED IN: endoplasmic reticulum, plasma membrane, CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), Guanine nucleotide-binding protein, beta subunit (InterPro:IPR016346), WD40 repeat (InterPro:IPR001680), G-protein, beta subunit (InterPro:IPR001632), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein (TAIR:AT5G67320.1); Has 59918 Blast hits to 28704 proteins in 832 species: Archae - 54; Bacteria - 8355; Metazoa - 23550; Fungi - 12390; Plants - 7677; Viruses - 0; Other Eukaryotes - 7892 (source: NCBI BLink). & (gnl|cdd|35507 : 441.0) no description available & (gnl|cdd|29257 : 221.0) no description available & (reliability: 1200.0) & (original description: Putative gb1, Description = Guanine nucleotide-binding protein subunit beta, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'niben101scf01006_311786-332996' '(at5g42080 : 1014.0) Encodes a dynamin-like protein related to phragmoplastin. Mutations in this gene, in combination with mutation in ADL1E, result in defects in embryogenesis, cell plate formation and trichome branching. Also controls vascular patterning in combination with VAN3 and GNOM. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis.; dynamin-like protein (DL1); CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1B (TAIR:AT3G61760.1). & (gnl|cdd|35667 : 562.0) no description available & (gnl|cdd|64873 : 270.0) no description available & (reliability: 2028.0) & (original description: Putative dnm1, Description = Dynamin, PFAM = PF02212;PF00350;PF01031)' T '30.5' 'signalling.G-proteins' 'niben101scf01006_844923-850547' '(gnl|cdd|35615 : 292.0) no description available & (gnl|cdd|57948 : 278.0) no description available & (q43463|rab7_soybn : 274.0) Ras-related protein Rab7 - Glycine max (Soybean) & (at1g22740 : 266.0) GTP-binding protein Rab7; RAB GTPase homolog G3B (RABG3B); FUNCTIONS IN: GTP binding; INVOLVED IN: intracellular protein transport, signal transduction, nucleocytoplasmic transport, protein transport, small GTPase mediated signal transduction; LOCATED IN: vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041), Ras (InterPro:IPR013753), Ras small GTPase, Ras type (InterPro:IPR003577), Small GTPase, Rho type (InterPro:IPR003578), Small GTP-binding protein (InterPro:IPR005225), Ras GTPase (InterPro:IPR001806), Small GTPase (InterPro:IPR020851), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog G3A (TAIR:AT4G09720.1); Has 25691 Blast hits to 25666 proteins in 724 species: Archae - 21; Bacteria - 135; Metazoa - 13533; Fungi - 3489; Plants - 2837; Viruses - 20; Other Eukaryotes - 5656 (source: NCBI BLink). & (reliability: 532.0) & (original description: Putative rab7, Description = Ras-related protein Rab7, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf01094_311157-314893' '(at5g45970 : 342.0) Encodes a Rac-like protein ARAC2. A member of ROP GTPase gene family.; RAC-like 2 (RAC2); FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RAC-like 3 (TAIR:AT4G35020.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q41253|rac13_goshi : 341.0) Rac-like GTP-binding protein RAC13 - Gossypium hirsutum (Upland cotton) & (gnl|cdd|58016 : 327.0) no description available & (gnl|cdd|35614 : 289.0) no description available & (reliability: 684.0) & (original description: Putative RAC7, Description = Rac-like GTP-binding protein 7, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf01147_108210-113002' '(at1g79860 : 545.0) Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth Growth.; RHO guanyl-nucleotide exchange factor 12 (ROPGEF12); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 11 (TAIR:AT1G52240.1); Has 305 Blast hits to 303 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 305; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67377 : 470.0) no description available & (reliability: 1090.0) & (original description: Putative ROPGEF12, Description = Rop guanine nucleotide exchange factor 12, PFAM = PF03759)' T '30.5' 'signalling.G-proteins' 'niben101scf01181_61995-66118' '(p93340|gblp_nicpl : 582.0) Guanine nucleotide-binding protein subunit beta-like protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g18130 : 523.0) Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1C has no phenotype on its own and probably acts redundantly with RACK1A and RACK1B.; receptor for activated C kinase 1C (RACK1C_AT); FUNCTIONS IN: nucleotide binding; INVOLVED IN: shoot development, root development; LOCATED IN: nucleolus, heterotrimeric G-protein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B (TAIR:AT1G48630.1); Has 88582 Blast hits to 37057 proteins in 965 species: Archae - 74; Bacteria - 10338; Metazoa - 34853; Fungi - 20136; Plants - 11319; Viruses - 6; Other Eukaryotes - 11856 (source: NCBI BLink). & (gnl|cdd|35500 : 447.0) no description available & (gnl|cdd|29257 : 232.0) no description available & (reliability: 1042.0) & (original description: Putative ARCA, Description = Guanine nucleotide-binding protein subunit beta-like protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'niben101scf01188_953008-964085' '(at1g02130 : 373.0) Belongs to the Rab1 GTPase subfamily. This small GTP-binding protein is required in ER to Golgi transportation.; RAS 5 (RA-5); FUNCTIONS IN: GTP binding; INVOLVED IN: response to cadmium ion, ER to Golgi vesicle-mediated transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 1A (TAIR:AT5G47200.1); Has 30420 Blast hits to 30350 proteins in 816 species: Archae - 27; Bacteria - 199; Metazoa - 15882; Fungi - 4318; Plants - 3658; Viruses - 20; Other Eukaryotes - 6316 (source: NCBI BLink). & (p40392|ric1_orysa : 362.0) Ras-related protein RIC1 - Oryza sativa (Rice) & (gnl|cdd|35307 : 329.0) no description available & (gnl|cdd|57955 : 318.0) no description available & (reliability: 746.0) & (original description: Putative RABD2A, Description = Ras-related protein RABD2a, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf01226_299371-308913' '(at2g41670 : 528.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G10650.1); Has 3980 Blast hits to 3980 proteins in 1445 species: Archae - 109; Bacteria - 2376; Metazoa - 398; Fungi - 429; Plants - 195; Viruses - 0; Other Eukaryotes - 473 (source: NCBI BLink). & (gnl|cdd|37696 : 279.0) no description available & (gnl|cdd|83086 : 185.0) no description available & (reliability: 1056.0) & (original description: Putative DGP1, Description = Mitochondrial GTPase 1, PFAM = PF01926)' T '30.5' 'signalling.G-proteins' 'niben101scf01226_303361-310012' '(at2g41670 : 367.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G10650.1); Has 3980 Blast hits to 3980 proteins in 1445 species: Archae - 109; Bacteria - 2376; Metazoa - 398; Fungi - 429; Plants - 195; Viruses - 0; Other Eukaryotes - 473 (source: NCBI BLink). & (gnl|cdd|37696 : 173.0) no description available & (gnl|cdd|83086 : 83.7) no description available & (reliability: 734.0) & (original description: Putative mtg1, Description = Mitochondrial GTPase 1, PFAM = PF01926)' T '30.5' 'signalling.G-proteins' 'niben101scf01249_334864-339714' '(at1g31930 : 380.0) Encodes XLG3 (extra-large G protein 3) that shows significant similarity to the G protein alpha subunit in its C terminal region. Involved in the regulation of root morphological and growth responses.; extra-large GTP-binding protein 3 (XLG3); FUNCTIONS IN: signal transducer activity, guanyl nucleotide binding; INVOLVED IN: in 11 processes; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Guanine nucleotide binding protein (G-protein), alpha subunit (InterPro:IPR001019), G protein alpha subunit, helical insertion (InterPro:IPR011025); BEST Arabidopsis thaliana protein match is: extra-large G-protein 1 (TAIR:AT2G23460.1). & (gnl|cdd|35305 : 204.0) no description available & (gnl|cdd|57932 : 199.0) no description available & (p93163|gpa2_soybn : 145.0) Guanine nucleotide-binding protein alpha-2 subunit (GP-alpha-2) - Glycine max (Soybean) & (reliability: 760.0) & (original description: Putative Os10g0117800, Description = Os10g0117800 protein, PFAM = PF00503)' T '30.5' 'signalling.G-proteins' 'niben101scf01295_706742-713706' '(at5g18570 : 611.0) Encodes AtObgC, a plant ortholog of bacterial Obg. AtObgC is a chloroplast-targeting GTPase essential for early embryogenesis. Mutations in this locus result in embryo lethality. The protein is dually localized in the stroma and the inner envelope membrane and is involved in thylakoid membrane biogenesis.; EMBRYO DEFECTIVE 269 (EMB269); FUNCTIONS IN: GTPase activity; INVOLVED IN: response to light stimulus, thylakoid membrane organization, embryo development, embryo development ending in seed dormancy; LOCATED IN: chloroplast, chloroplast stroma, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG subdomain (InterPro:IPR006169), GTP-binding protein GTP1/OBG, C-terminal (InterPro:IPR015349), GTP1/OBG (InterPro:IPR006073), GTP1/OBG, conserved site (InterPro:IPR006074), GTP-binding protein, HSR1-related (InterPro:IPR002917), GTP-binding protein Obg/CgtA (InterPro:IPR014100); BEST Arabidopsis thaliana protein match is: GTP-binding protein Obg/CgtA (TAIR:AT1G07615.1); Has 23458 Blast hits to 23162 proteins in 3000 species: Archae - 644; Bacteria - 14053; Metazoa - 1121; Fungi - 826; Plants - 464; Viruses - 52; Other Eukaryotes - 6298 (source: NCBI BLink). & (gnl|cdd|84060 : 493.0) no description available & (gnl|cdd|36702 : 285.0) no description available & (reliability: 1222.0) & (original description: Putative OBGL, Description = GTP-binding protein OBGC, chloroplastic, PFAM = PF01018;PF01926;PF09269)' T '30.5' 'signalling.G-proteins' 'niben101scf01328_112754-120048' '(at4g17170 : 377.0) member of RAB gene family; RAB GTPase homolog B1C (RABB1C); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: ER to Golgi vesicle-mediated transport, pollen sperm cell differentiation, cell growth; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: GTP-binding 2 (TAIR:AT4G35860.1); Has 27116 Blast hits to 27043 proteins in 734 species: Archae - 17; Bacteria - 131; Metazoa - 14131; Fungi - 4055; Plants - 2966; Viruses - 20; Other Eukaryotes - 5796 (source: NCBI BLink). & (p49104|rab2b_maize : 368.0) Ras-related protein Rab-2-B - Zea mays (Maize) & (gnl|cdd|35321 : 361.0) no description available & (gnl|cdd|57952 : 342.0) no description available & (reliability: 754.0) & (original description: Putative RABB1B, Description = Ras-related protein RABB1b, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf01374_108665-113344' '(at1g79860 : 529.0) Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth Growth.; RHO guanyl-nucleotide exchange factor 12 (ROPGEF12); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 11 (TAIR:AT1G52240.1); Has 305 Blast hits to 303 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 305; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67377 : 469.0) no description available & (reliability: 1058.0) & (original description: Putative ROPGEF8, Description = Rho guanine nucleotide exchange factor 8, PFAM = PF03759)' T '30.5' 'signalling.G-proteins' 'niben101scf01376_405947-411821' '(at2g31680 : 330.0) RAB GTPase homolog A5D (RABA5d); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A5E (TAIR:AT1G05810.1); Has 27628 Blast hits to 27593 proteins in 754 species: Archae - 22; Bacteria - 125; Metazoa - 14573; Fungi - 3749; Plants - 3264; Viruses - 20; Other Eukaryotes - 5875 (source: NCBI BLink). & (gnl|cdd|35310 : 291.0) no description available & (gnl|cdd|57954 : 280.0) no description available & (q40191|rb11a_lotja : 243.0) Ras-related protein Rab11A - Lotus japonicus & (reliability: 660.0) & (original description: Putative gmr2, Description = GTPase, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf01376_424475-428963' '(at2g43120 : 399.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: stem, flower; CONTAINS InterPro DOMAIN/s: Pirin, C-terminal (InterPro:IPR008778), Pirin (InterPro:IPR012093), Cupin, RmlC-type (InterPro:IPR011051), Pirin, N-terminal (InterPro:IPR003829); BEST Arabidopsis thaliana protein match is: pirin (TAIR:AT3G59220.1); Has 7357 Blast hits to 7357 proteins in 1454 species: Archae - 66; Bacteria - 4603; Metazoa - 71; Fungi - 219; Plants - 125; Viruses - 0; Other Eukaryotes - 2273 (source: NCBI BLink). & (gnl|cdd|31927 : 217.0) no description available & (reliability: 722.0) & (original description: Putative yhhW, Description = Quercetin 2,3-dioxygenase, PFAM = PF05726;PF02678)' T '30.5' 'signalling.G-proteins' 'niben101scf01396_771797-775738' '(p41918|rana1_tobac : 437.0) GTP-binding nuclear protein Ran-A1 - Nicotiana tabacum (Common tobacco) & (at5g55190 : 428.0) A member of RAN GTPase gene family. Encodes a small soluble GTP-binding protein. Likely to be involved in nuclear translocation of proteins. May also be involved in cell cycle progression.; RAN GTPase 3 (RAN3); FUNCTIONS IN: protein binding, GTP binding, GTPase activity; INVOLVED IN: protein import into nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753); BEST Arabidopsis thaliana protein match is: RAS-related nuclear protein-1 (TAIR:AT5G20010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35319 : 359.0) no description available & (gnl|cdd|57936 : 348.0) no description available & (reliability: 856.0) & (original description: Putative RAN3, Description = GTP-binding nuclear protein Ran-3, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf01466_49341-54761' '(q40522|rb11d_tobac : 411.0) Ras-related protein Rab11D - Nicotiana tabacum (Common tobacco) & (at5g65270 : 379.0) RAB GTPase homolog A4A (RABA4a); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A4B (TAIR:AT4G39990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35310 : 327.0) no description available & (gnl|cdd|57954 : 307.0) no description available & (reliability: 758.0) & (original description: Putative RAB11C, Description = Ras-related protein Rab11C, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf01497_650367-652572' '(at4g35750 : 329.0) SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); BEST Arabidopsis thaliana protein match is: SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (TAIR:AT3G10210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37844 : 132.0) no description available & (reliability: 658.0) & (original description: Putative , Description = Putative sucrose-phosphatase 2, PFAM = PF13716)' T '30.5' 'signalling.G-proteins' 'niben101scf01502_26196-31556' '(at1g50920 : 900.0) Nucleolar GTP-binding protein; FUNCTIONS IN: GTP binding, nucleotide binding; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), Nucleolar GTP-binding 1 (InterPro:IPR010674), NOG, C-terminal (InterPro:IPR012973); BEST Arabidopsis thaliana protein match is: Nucleolar GTP-binding protein (TAIR:AT1G10300.1); Has 9379 Blast hits to 9179 proteins in 2035 species: Archae - 370; Bacteria - 5195; Metazoa - 1143; Fungi - 469; Plants - 325; Viruses - 0; Other Eukaryotes - 1877 (source: NCBI BLink). & (gnl|cdd|36703 : 782.0) no description available & (gnl|cdd|31281 : 367.0) no description available & (reliability: 1800.0) & (original description: Putative nog1, Description = Nucleolar GTP-binding protein 1, PFAM = PF08155;PF06858)' T '30.5' 'signalling.G-proteins' 'niben101scf01515_48923-60970' '(at5g13300 : 1121.0) Belongs to 15-member small GTPase gene family, ARF-GAP domain proteins (AGD); corresponds to AGD3, and is one of four proteins belonging to class 1, together with AGD1, AGD2 and AGD4. The protein contains four domains: BAR domain, PH domain, an ARF-GAP domain, and two Ankyrin repeats. In sfc mutants, the secondary and tertiary veins of cotyledons, leaves, sepals and petals are largely replaced by small segments of discontinuous veins. sfc mutants have exaggerated responses to auxin.; SCARFACE (SFC); FUNCTIONS IN: ARF GTPase activator activity, phosphoinositide binding; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, phloem or xylem histogenesis, leaf morphogenesis; LOCATED IN: cytosol, trans-Golgi network transport vesicle, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), Pleckstrin homology-type (InterPro:IPR011993), Ankyrin repeat-containing domain (InterPro:IPR020683), BAR (InterPro:IPR004148), Pleckstrin homology (InterPro:IPR001849), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 1 (TAIR:AT5G61980.1); Has 64753 Blast hits to 27558 proteins in 1221 species: Archae - 110; Bacteria - 5131; Metazoa - 34265; Fungi - 4887; Plants - 2591; Viruses - 654; Other Eukaryotes - 17115 (source: NCBI BLink). & (gnl|cdd|35741 : 557.0) no description available & (gnl|cdd|85433 : 131.0) no description available & (reliability: 2242.0) & (original description: Putative AGD3, Description = ADP-ribosylation factor GTPase-activating protein AGD3, PFAM = PF16746;PF12796;PF00169;PF01412)' T '30.5' 'signalling.G-proteins' 'niben101scf01580_11040-18458' '(at4g38430 : 555.0) Member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily, also known as DUF315). Interacts with ROP1 but the whole protein lacks Rho guanyl-nucleotide exchange factor activity in vitro. The DUF315/PRONE domain is sufficient to confer RopGEF catalytic activity.; rho guanyl-nucleotide exchange factor 1 (ROPGEF1); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 7 (TAIR:AT5G02010.1); Has 308 Blast hits to 304 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 308; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67377 : 463.0) no description available & (reliability: 1110.0) & (original description: Putative ROPGEF1, Description = Rop guanine nucleotide exchange factor 1, PFAM = PF03759)' T '30.5' 'signalling.G-proteins' 'niben101scf01580_206575-209684' '(at4g35750 : 238.0) SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); BEST Arabidopsis thaliana protein match is: SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (TAIR:AT3G10210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37844 : 106.0) no description available & (reliability: 476.0) & (original description: Putative , Description = , PFAM = PF13716)' T '30.5' 'signalling.G-proteins' 'niben101scf01607_118336-122733' '(at5g60860 : 386.0) RAB GTPase homolog A1F (RABA1f); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1G (TAIR:AT3G15060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q40521|rb11b_tobac : 379.0) Ras-related protein Rab11B - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35310 : 341.0) no description available & (gnl|cdd|57954 : 320.0) no description available & (reliability: 772.0) & (original description: Putative RABA1F, Description = Ras-related protein RABA1f, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf01625_149258-160308' '(at4g17170 : 377.0) member of RAB gene family; RAB GTPase homolog B1C (RABB1C); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: ER to Golgi vesicle-mediated transport, pollen sperm cell differentiation, cell growth; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: GTP-binding 2 (TAIR:AT4G35860.1); Has 27116 Blast hits to 27043 proteins in 734 species: Archae - 17; Bacteria - 131; Metazoa - 14131; Fungi - 4055; Plants - 2966; Viruses - 20; Other Eukaryotes - 5796 (source: NCBI BLink). & (p49103|rab2a_maize : 369.0) Ras-related protein Rab-2-A - Zea mays (Maize) & (gnl|cdd|35321 : 357.0) no description available & (gnl|cdd|57952 : 339.0) no description available & (reliability: 754.0) & (original description: Putative RABB1C, Description = Ras-related protein RABB1c, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf01664_258673-262855' '(q39435|rac1_betvu : 360.0) Rac-like GTP-binding protein RHO1 (RHO1Bv) - Beta vulgaris (Sugar beet) & (at3g51300 : 356.0) Encodes a pollen-specific Rop GTPase, member of the Rho family of small GTP binding proteins that interacts with RIC3 and RIC4 to control tip growth in pollen tubes. These three proteins promote the proper targeting of exocytic vesicles in the pollen tube tip. ROP1 activity is regulated by the REN1 GTPase activator protein.; RHO-related protein from plants 1 (ROP1); CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: Arabidopsis RAC-like 1 (TAIR:AT2G17800.2); Has 24331 Blast hits to 24300 proteins in 680 species: Archae - 9; Bacteria - 65; Metazoa - 12719; Fungi - 3503; Plants - 2700; Viruses - 20; Other Eukaryotes - 5315 (source: NCBI BLink). & (gnl|cdd|58016 : 332.0) no description available & (gnl|cdd|35614 : 292.0) no description available & (reliability: 712.0) & (original description: Putative rac1, Description = Rac-like GTP-binding protein 3, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf01746_377652-383894' '(at5g10260 : 371.0) RAB GTPase homolog H1E (RABH1e); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab6-related (InterPro:IPR015600); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog H1D (TAIR:AT2G22290.1); Has 27017 Blast hits to 26988 proteins in 737 species: Archae - 21; Bacteria - 160; Metazoa - 14299; Fungi - 3762; Plants - 2966; Viruses - 20; Other Eukaryotes - 5789 (source: NCBI BLink). & (gnl|cdd|35317 : 332.0) no description available & (gnl|cdd|57947 : 299.0) no description available & (p31583|rhn1_nicpl : 147.0) Ras-related protein RHN1 - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 742.0) & (original description: Putative RABH1E, Description = Ras-related protein RABH1e, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf01773_344189-370011' '(at4g01860 : 1209.0) Transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36192 : 458.0) no description available & (reliability: 2418.0) & (original description: Putative At4g01860, Description = At4g01860, PFAM = PF00400)' T '30.5' 'signalling.G-proteins' 'niben101scf01773_354996-357678' '(at4g01860 : 142.0) Transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative At4g01860, Description = WD repeat-containing protein 6, PFAM = )' T '30.5' 'signalling.G-proteins' 'niben101scf01811_230160-234948' '(at1g24130 : 390.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, heterotrimeric G-protein complex; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G50120.1); Has 45824 Blast hits to 22056 proteins in 757 species: Archae - 54; Bacteria - 6419; Metazoa - 16905; Fungi - 10404; Plants - 5900; Viruses - 0; Other Eukaryotes - 6142 (source: NCBI BLink). & (gnl|cdd|29257 : 142.0) no description available & (gnl|cdd|35540 : 101.0) no description available & (reliability: 718.0) & (original description: Putative BnaA09g29760D, Description = BnaA09g29760D protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'niben101scf01818_150250-170344' '(at3g55020 : 776.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G39280.1); Has 8291 Blast hits to 7654 proteins in 526 species: Archae - 15; Bacteria - 632; Metazoa - 4273; Fungi - 1225; Plants - 609; Viruses - 33; Other Eukaryotes - 1504 (source: NCBI BLink). & (gnl|cdd|37269 : 257.0) no description available & (gnl|cdd|47500 : 174.0) no description available & (reliability: 1552.0) & (original description: Putative ARALYDRAFT_665455, Description = Predicted protein, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben101scf01854_65538-80544' '(at1g50300 : 322.0) TBP-associated factor 15 (TAF15); FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: TBP-associated factor 15B (TAIR:AT5G58470.2); Has 11021 Blast hits to 6677 proteins in 384 species: Archae - 8; Bacteria - 254; Metazoa - 5533; Fungi - 1360; Plants - 1875; Viruses - 14; Other Eukaryotes - 1977 (source: NCBI BLink). & (gnl|cdd|37206 : 100.0) no description available & (reliability: 644.0) & (original description: Putative TAF15, Description = Transcription initiation factor TFIID subunit 15, PFAM = PF00641;PF00641;PF00076)' T '30.5' 'signalling.G-proteins' 'niben101scf01942_447036-456623' '(q43463|rab7_soybn : 395.0) Ras-related protein Rab7 - Glycine max (Soybean) & (at4g09720 : 368.0) RAB GTPase homolog G3A (RABG3A); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: intracellular protein transport, signal transduction, nucleocytoplasmic transport, protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041), Ras (InterPro:IPR013753), Ras small GTPase, Ras type (InterPro:IPR003577), Small GTPase, Rho type (InterPro:IPR003578), Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog G3B (TAIR:AT1G22740.1). & (gnl|cdd|35615 : 337.0) no description available & (gnl|cdd|57948 : 313.0) no description available & (reliability: 736.0) & (original description: Putative rab7, Description = Ras-related protein Rab7, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf01959_742936-751289' '(at1g52980 : 745.0) GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917), NGP1, N-terminal (InterPro:IPR012971); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT3G07050.1); Has 37841 Blast hits to 9407 proteins in 1963 species: Archae - 139; Bacteria - 33291; Metazoa - 1149; Fungi - 897; Plants - 387; Viruses - 125; Other Eukaryotes - 1853 (source: NCBI BLink). & (gnl|cdd|37634 : 663.0) no description available & (gnl|cdd|57929 : 304.0) no description available & (reliability: 1490.0) & (original description: Putative NUG2, Description = Nuclear/nucleolar GTPase 2, PFAM = PF08153;PF01926)' T '30.5' 'signalling.G-proteins' 'niben101scf01993_538246-549232' '(at3g11730 : 220.0) Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. It has also been identified as an isoprenylated protein.; ATFP8; FUNCTIONS IN: GTP binding, myosin XI tail binding, GTP-dependent protein binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 1A (TAIR:AT5G47200.1); Has 29795 Blast hits to 29734 proteins in 779 species: Archae - 25; Bacteria - 142; Metazoa - 15645; Fungi - 4180; Plants - 3599; Viruses - 20; Other Eukaryotes - 6184 (source: NCBI BLink). & (gnl|cdd|57955 : 217.0) no description available & (p40392|ric1_orysa : 211.0) Ras-related protein RIC1 - Oryza sativa (Rice) & (gnl|cdd|35307 : 206.0) no description available & (reliability: 440.0) & (original description: Putative rab1, Description = GTP-binding protein ypt1, PFAM = PF00071;PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf02001_191826-196686' '(at3g51300 : 360.0) Encodes a pollen-specific Rop GTPase, member of the Rho family of small GTP binding proteins that interacts with RIC3 and RIC4 to control tip growth in pollen tubes. These three proteins promote the proper targeting of exocytic vesicles in the pollen tube tip. ROP1 activity is regulated by the REN1 GTPase activator protein.; RHO-related protein from plants 1 (ROP1); CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: Arabidopsis RAC-like 1 (TAIR:AT2G17800.2); Has 24331 Blast hits to 24300 proteins in 680 species: Archae - 9; Bacteria - 65; Metazoa - 12719; Fungi - 3503; Plants - 2700; Viruses - 20; Other Eukaryotes - 5315 (source: NCBI BLink). & (q39435|rac1_betvu : 359.0) Rac-like GTP-binding protein RHO1 (RHO1Bv) - Beta vulgaris (Sugar beet) & (gnl|cdd|58016 : 333.0) no description available & (gnl|cdd|35614 : 292.0) no description available & (reliability: 720.0) & (original description: Putative ARAC11, Description = Rac-like GTP-binding protein ARAC11, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf02021_64405-81122' '(at1g03160 : 806.0) A new plant-specific member of the dynamin superfamily; defines a new protein class within the dynamin superfamily of membrane remodeling GTPases that regulates organization of the thylakoid network in plants. Targeted to chloroplasts and associated with thylakoid and envelope membranes as punctate structures. Knockout mutants have abnormalities in chloroplast and thylakoid morphology, including disorganized grana stacks and alterations in the relative proportions of grana and stroma thylakoids. Overexpression of FZL-GFP also conferred defects in thylakoid organization.; FZO-like (FZL); FUNCTIONS IN: thiamin-phosphate diphosphorylase activity, GTP binding, GTPase activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, thylakoid membrane organization; LOCATED IN: chloroplast membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiamine monophosphate synthase (InterPro:IPR003733), Protein synthesis factor, GTP-binding (InterPro:IPR000795); Has 4303 Blast hits to 3755 proteins in 1119 species: Archae - 53; Bacteria - 3491; Metazoa - 428; Fungi - 84; Plants - 61; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink). & (gnl|cdd|35669 : 234.0) no description available & (gnl|cdd|84713 : 90.0) no description available & (reliability: 1612.0) & (original description: Putative FZL, Description = Probable transmembrane GTPase FZO-like, chloroplastic, PFAM = PF01926;PF02581)' T '30.5' 'signalling.G-proteins' 'niben101scf02021_117922-121523' '(at3g63130 : 620.0) Encodes a RAN GTPase activating protein involved in nuclear import, cell plate formation and mitotic spindle formation.; RAN GTPase activating protein 1 (RANGAP1); FUNCTIONS IN: RAN GTPase activator activity; INVOLVED IN: M phase specific microtubule process, protein import into nucleus; LOCATED IN: nuclear envelope, cell plate; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: RAN GTPase activating protein 2 (TAIR:AT5G19320.1). & (gnl|cdd|37120 : 334.0) no description available & (gnl|cdd|29015 : 124.0) no description available & (reliability: 1240.0) & (original description: Putative RANGAP1, Description = RAN GTPase-activating protein 1, PFAM = PF13943;PF13516;PF13516;PF13516)' T '30.5' 'signalling.G-proteins' 'niben101scf02030_276868-279913' '(at1g52380 : 226.0) NUP50 (Nucleoporin 50 kDa) protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular transport; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein 1 (InterPro:IPR000156), Pleckstrin homology-type (InterPro:IPR011993), Nuclear pore complex, NUP2/50/61 (InterPro:IPR015007); BEST Arabidopsis thaliana protein match is: NUP50 (Nucleoporin 50 kDa) protein (TAIR:AT3G15970.1); Has 1614 Blast hits to 1303 proteins in 238 species: Archae - 0; Bacteria - 48; Metazoa - 835; Fungi - 410; Plants - 179; Viruses - 3; Other Eukaryotes - 139 (source: NCBI BLink). & (gnl|cdd|29845 : 99.2) no description available & (reliability: 452.0) & (original description: Putative NUP50A, Description = Nuclear pore complex protein NUP50A, PFAM = PF08911;PF00638)' T '30.5' 'signalling.G-proteins' 'niben101scf02081_248387-252335' '(at1g01700 : 531.0) Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.; RHO guanyl-nucleotide exchange factor 2 (ROPGEF2); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 3 (TAIR:AT4G00460.2); Has 308 Blast hits to 304 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 308; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67377 : 507.0) no description available & (reliability: 1062.0) & (original description: Putative ROPGEF3, Description = Rop guanine nucleotide exchange factor 3, PFAM = PF03759)' T '30.5' 'signalling.G-proteins' 'niben101scf02086_179075-194206' '(at2g37290 : 699.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT3G55020.1). & (gnl|cdd|37269 : 240.0) no description available & (gnl|cdd|47500 : 181.0) no description available & (reliability: 1398.0) & (original description: Putative Sb03g039030, Description = Putative uncharacterized protein Sb03g039030, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben101scf02112_37476-55741' '(at5g52580 : 894.0) RabGAP/TBC domain-containing protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195), Protein of unknown function DUF3548 (InterPro:IPR021935); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT4G27100.2). & (gnl|cdd|37408 : 307.0) no description available & (gnl|cdd|47500 : 179.0) no description available & (reliability: 1788.0) & (original description: Putative At5g52580, Description = RabGAP/TBC domain-containing protein, PFAM = PF00566;PF12068)' T '30.5' 'signalling.G-proteins' 'niben101scf02197_11794-14447' '(gnl|cdd|35321 : 231.0) no description available & (gnl|cdd|57952 : 230.0) no description available & (at4g17170 : 222.0) member of RAB gene family; RAB GTPase homolog B1C (RABB1C); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: ER to Golgi vesicle-mediated transport, pollen sperm cell differentiation, cell growth; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: GTP-binding 2 (TAIR:AT4G35860.1); Has 27116 Blast hits to 27043 proteins in 734 species: Archae - 17; Bacteria - 131; Metazoa - 14131; Fungi - 4055; Plants - 2966; Viruses - 20; Other Eukaryotes - 5796 (source: NCBI BLink). & (p49104|rab2b_maize : 221.0) Ras-related protein Rab-2-B - Zea mays (Maize) & (reliability: 444.0) & (original description: Putative rab2, Description = Ras-related protein Rab-2A, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf02216_312826-319466' '(p25766|rgp1_orysa : 349.0) Ras-related protein RGP1 (GTP-binding regulatory protein RGP1) - Oryza sativa (Rice) & (at3g12160 : 339.0) Encodes RABA4D, a member of the Arabidopsis RabA4 subfamily of Rab GTPase proteins. It is transported in exocytic vesicles to the apical tip of pollen tubes where it appears to promote tip growth. Proper localization of RabA4d depends on ROP1, RIC3, and RIC4 activity.; RAB GTPase homolog A4D (RABA4D); FUNCTIONS IN: GTP binding; INVOLVED IN: regulation of pollen tube growth, pollen tube growth, pollen tube development; LOCATED IN: exocytic vesicle, apical part of cell; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A4C (TAIR:AT5G47960.1); Has 28921 Blast hits to 28882 proteins in 778 species: Archae - 24; Bacteria - 155; Metazoa - 15072; Fungi - 4263; Plants - 3370; Viruses - 20; Other Eukaryotes - 6017 (source: NCBI BLink). & (gnl|cdd|35310 : 326.0) no description available & (gnl|cdd|57954 : 312.0) no description available & (reliability: 678.0) & (original description: Putative RGP1, Description = Ras-related protein RGP1, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf02351_504139-534496' '(at4g12640 : 504.0) RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Spen paralogue and orthologue SPOC, C-terminal (InterPro:IPR012921), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (TAIR:AT2G43410.4); Has 8554 Blast hits to 7148 proteins in 405 species: Archae - 8; Bacteria - 199; Metazoa - 4614; Fungi - 1472; Plants - 1436; Viruses - 0; Other Eukaryotes - 825 (source: NCBI BLink). & (gnl|cdd|71185 : 84.6) no description available & (reliability: 1008.0) & (original description: Putative FPA, Description = Flowering time control protein FPA, PFAM = PF00076;PF00076;PF07744)' T '30.5' 'signalling.G-proteins' 'niben101scf02401_102076-107090' '(p93340|gblp_nicpl : 606.0) Guanine nucleotide-binding protein subunit beta-like protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g18130 : 504.0) Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1C has no phenotype on its own and probably acts redundantly with RACK1A and RACK1B.; receptor for activated C kinase 1C (RACK1C_AT); FUNCTIONS IN: nucleotide binding; INVOLVED IN: shoot development, root development; LOCATED IN: nucleolus, heterotrimeric G-protein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B (TAIR:AT1G48630.1); Has 88582 Blast hits to 37057 proteins in 965 species: Archae - 74; Bacteria - 10338; Metazoa - 34853; Fungi - 20136; Plants - 11319; Viruses - 6; Other Eukaryotes - 11856 (source: NCBI BLink). & (gnl|cdd|35500 : 433.0) no description available & (gnl|cdd|29257 : 226.0) no description available & (reliability: 1000.0) & (original description: Putative ARCA, Description = Guanine nucleotide-binding protein subunit beta-like protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'niben101scf02425_563685-568505' '(at4g29830 : 420.0) The protein is composed of repeats of WD motif which is involved in protein complex formation. The gene is involved in flower timing and flower development. This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase. Loss of gene function leads to a redistribution of H3K4me3 and K3K36me2 modifications within genes but not a change in the overall abundance of these modifications within chromatin.; vernalization independence 3 (VIP3); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: histone H3-K4 methylation, histone H3-K36 methylation, negative regulation of flower development; LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related (TAIR:AT2G41500.1); Has 81424 Blast hits to 33679 proteins in 849 species: Archae - 94; Bacteria - 9736; Metazoa - 32144; Fungi - 18699; Plants - 10476; Viruses - 0; Other Eukaryotes - 10275 (source: NCBI BLink). & (gnl|cdd|29257 : 189.0) no description available & (gnl|cdd|35493 : 139.0) no description available & (reliability: 840.0) & (original description: Putative VIP3, Description = WD repeat-containing protein VIP3, PFAM = PF12894;PF00400;PF00400;PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'niben101scf02426_128836-169782' '(at1g10870 : 915.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD4 belongs to the Class 1, together with AGD1, AGD2, and AGD3.; ARF-GAP domain 4 (AGD4); FUNCTIONS IN: ARF GTPase activator activity, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), Pleckstrin homology-type (InterPro:IPR011993), Ankyrin repeat-containing domain (InterPro:IPR020683), BAR (InterPro:IPR004148), Pleckstrin homology (InterPro:IPR001849), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 2 (TAIR:AT1G60860.1); Has 23403 Blast hits to 15248 proteins in 655 species: Archae - 77; Bacteria - 1735; Metazoa - 12296; Fungi - 2244; Plants - 1395; Viruses - 252; Other Eukaryotes - 5404 (source: NCBI BLink). & (gnl|cdd|35741 : 507.0) no description available & (gnl|cdd|85433 : 140.0) no description available & (reliability: 1830.0) & (original description: Putative AGD4, Description = ADP-ribosylation factor GTPase-activating protein AGD4, PFAM = PF12796;PF00169;PF16746;PF01412)' T '30.5' 'signalling.G-proteins' 'niben101scf02426_279625-297972' '(at2g03150 : 388.0) embryo defective 1579 (emb1579); FUNCTIONS IN: binding, calcium ion binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39447 : 331.0) no description available & (reliability: 776.0) & (original description: Putative Sb10g022236, Description = Putative uncharacterized protein Sb10g022236, PFAM = PF14443)' T '30.5' 'signalling.G-proteins' 'niben101scf02531_288932-297263' '(at5g45760 : 425.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29257 : 83.5) no description available & (reliability: 850.0) & (original description: Putative WDR53, Description = WD40-containing protein, PFAM = PF00400)' T '30.5' 'signalling.G-proteins' 'niben101scf02541_145864-151452' '(at4g04900 : 85.1) encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Most similar to RIC9 and RIC11 (subfamily group I). Gene is expressed predominantly in roots, leaves, and seedlings.; ROP-interactive CRIB motif-containing protein 10 (RIC10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen tube growth; LOCATED IN: cytoplasm; EXPRESSED IN: seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095); BEST Arabidopsis thaliana protein match is: PAK-box/P21-Rho-binding family protein (TAIR:AT4G21745.1); Has 685 Blast hits to 255 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 53; Fungi - 27; Plants - 173; Viruses - 0; Other Eukaryotes - 432 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative EFTS, Description = CRIB domain-containing protein RIC10, PFAM = PF00786)' T '30.5' 'signalling.G-proteins' 'niben101scf02606_53215-60046' '(gnl|cdd|35301 : 317.0) no description available & (at5g59840 : 313.0) Ras-related small GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 8A (TAIR:AT3G46060.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|57953 : 311.0) no description available & (q39433|rb1bv_betvu : 294.0) Ras-related protein RAB1BV - Beta vulgaris (Sugar beet) & (reliability: 626.0) & (original description: Putative rab8A, Description = Ras-related protein Rab-8A, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf02621_357870-363713' '(q6ep31|rac5_orysa : 352.0) Rac-like GTP-binding protein 5 (OsRac5) (GTPase protein RacD) - Oryza sativa (Rice) & (at4g35020 : 348.0) A member of ROP GTPase gene family; Encodes a Rho-like GTP binding protein.; RAC-like 3 (RAC3); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras small GTPase, Rab type (InterPro:IPR003579), Ras (InterPro:IPR013753), Ras small GTPase, Ras type (InterPro:IPR003577), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RAC-like GTP binding protein 5 (TAIR:AT1G75840.1). & (gnl|cdd|58016 : 337.0) no description available & (gnl|cdd|35614 : 298.0) no description available & (reliability: 696.0) & (original description: Putative ARAC3, Description = Rac-like GTP-binding protein ARAC3, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf02693_62529-71496' '(gnl|cdd|35300 : 329.0) no description available & (gnl|cdd|57938 : 329.0) no description available & (at4g02080 : 275.0) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.; secretion-associated RAS super family 2 (SAR2); FUNCTIONS IN: GTP binding; INVOLVED IN: intracellular protein transport; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT3G62560.1); Has 6784 Blast hits to 6782 proteins in 374 species: Archae - 2; Bacteria - 40; Metazoa - 3245; Fungi - 1245; Plants - 1081; Viruses - 0; Other Eukaryotes - 1171 (source: NCBI BLink). & (o04266|sar1a_bracm : 271.0) GTP-binding protein SAR1A - Brassica campestris (Field mustard) & (reliability: 550.0) & (original description: Putative SAR1B, Description = GTP-binding protein SAR1B, PFAM = PF00025)' T '30.5' 'signalling.G-proteins' 'niben101scf02791_103403-115875' '(at1g43890 : 352.0) ras-related small GTPase; RAB GTPASE HOMOLOG B18 (RAB18); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab18 (InterPro:IPR015598); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog C2A (TAIR:AT5G03530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35303 : 318.0) no description available & (gnl|cdd|57949 : 274.0) no description available & (p36862|yptv3_volca : 226.0) GTP-binding protein yptV3 - Volvox carteri & (reliability: 704.0) & (original description: Putative RABC1, Description = Ras-related protein RABC1, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf02816_1664038-1681550' '(at3g60860 : 2499.0) SEC7-like guanine nucleotide exchange family protein; FUNCTIONS IN: binding, ARF guanyl-nucleotide exchange factor activity, guanyl-nucleotide exchange factor activity; INVOLVED IN: regulation of ARF protein signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904), Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF1981, SEC7 associated (InterPro:IPR015403); BEST Arabidopsis thaliana protein match is: SEC7-like guanine nucleotide exchange family protein (TAIR:AT1G01960.1); Has 2962 Blast hits to 2694 proteins in 246 species: Archae - 0; Bacteria - 33; Metazoa - 1475; Fungi - 672; Plants - 315; Viruses - 0; Other Eukaryotes - 467 (source: NCBI BLink). & (gnl|cdd|36147 : 1537.0) no description available & (gnl|cdd|34895 : 335.0) no description available & (reliability: 4998.0) & (original description: Putative BIG2, Description = Brefeldin A-inhibited guanine nucleotide-exchange protein 2, PFAM = PF12783;PF16213;PF09324;PF01369;PF16206)' T '30.5' 'signalling.G-proteins' 'niben101scf02837_489626-497841' '(at3g59920 : 771.0) RAB GDP DISSOCIATION INHIBITOR 2; RAB GDP dissociation inhibitor 2 (GDI2); FUNCTIONS IN: RAB GDP-dissociation inhibitor activity; INVOLVED IN: regulation of GTPase activity, protein transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rab GTPase activator (InterPro:IPR002005), GDP dissociation inhibitor (InterPro:IPR018203), Rab GDI protein (InterPro:IPR000806); BEST Arabidopsis thaliana protein match is: guanosine nucleotide diphosphate dissociation inhibitor 1 (TAIR:AT2G44100.1); Has 1316 Blast hits to 1212 proteins in 257 species: Archae - 2; Bacteria - 2; Metazoa - 653; Fungi - 287; Plants - 181; Viruses - 0; Other Eukaryotes - 191 (source: NCBI BLink). & (gnl|cdd|64840 : 713.0) no description available & (gnl|cdd|36652 : 639.0) no description available & (reliability: 1542.0) & (original description: Putative gdi, Description = Rab GDP dissociation inhibitor alpha, PFAM = PF00996)' T '30.5' 'signalling.G-proteins' 'niben101scf02892_136744-142127' '(at1g09630 : 349.0) Encodes a putative GTP-binding protein. Associates with organelles on a pathway from the Golgi to the plasma membrane in interphase. In dividing cells acts at the cell plate.; RAB GTPase 11C (RAB11c); FUNCTIONS IN: GTP binding; INVOLVED IN: cytokinesis; LOCATED IN: endosome, plasma membrane, cell plate; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A2B (TAIR:AT1G07410.1); Has 27576 Blast hits to 27520 proteins in 758 species: Archae - 26; Bacteria - 154; Metazoa - 14618; Fungi - 3770; Plants - 3044; Viruses - 20; Other Eukaryotes - 5944 (source: NCBI BLink). & (gnl|cdd|35310 : 326.0) no description available & (gnl|cdd|57954 : 324.0) no description available & (q39434|rb2bv_betvu : 315.0) Ras-related protein Rab2BV - Beta vulgaris (Sugar beet) & (reliability: 698.0) & (original description: Putative RABA2A, Description = Ras-related protein RABA2a, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf02911_533036-537974' '(at3g07880 : 291.0) SUPERCENTIPEDE1 (SCN1); FUNCTIONS IN: Rho GDP-dissociation inhibitor activity; INVOLVED IN: root epidermal cell differentiation, cell tip growth; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), RHO protein GDP dissociation inhibitor (InterPro:IPR000406); BEST Arabidopsis thaliana protein match is: Immunoglobulin E-set superfamily protein (TAIR:AT1G62450.1); Has 660 Blast hits to 660 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 325; Fungi - 162; Plants - 120; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|38415 : 250.0) no description available & (gnl|cdd|65863 : 110.0) no description available & (reliability: 582.0) & (original description: Putative rhoGDI1, Description = Rho GDP dissociation inhibitor 1, PFAM = PF02115)' T '30.5' 'signalling.G-proteins' 'niben101scf02911_622096-625112' '(at5g47520 : 357.0) RAB GTPase homolog A5A (RABA5a); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A5D (TAIR:AT2G31680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35310 : 288.0) no description available & (gnl|cdd|57954 : 282.0) no description available & (q40191|rb11a_lotja : 242.0) Ras-related protein Rab11A - Lotus japonicus & (reliability: 714.0) & (original description: Putative RABA5A, Description = Ras-related protein RABA5a, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf02976_128462-136529' '(at5g45130 : 338.0) small GTP binding protein; RAB homolog 1 (RHA1); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab5-related (InterPro:IPR015599); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT4G19640.1); Has 26267 Blast hits to 26237 proteins in 716 species: Archae - 26; Bacteria - 136; Metazoa - 13722; Fungi - 3681; Plants - 2979; Viruses - 20; Other Eukaryotes - 5703 (source: NCBI BLink). & (p29687|rab5_tobac : 319.0) Ras-related protein Rab5 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|57946 : 288.0) no description available & (gnl|cdd|35315 : 281.0) no description available & (reliability: 676.0) & (original description: Putative RABF2B, Description = Ras-related protein RABF2b, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf02989_285129-295517' '(at4g21520 : 562.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G08390.1); Has 9857 Blast hits to 6114 proteins in 421 species: Archae - 34; Bacteria - 3288; Metazoa - 2459; Fungi - 1903; Plants - 847; Viruses - 0; Other Eukaryotes - 1326 (source: NCBI BLink). & (gnl|cdd|38130 : 429.0) no description available & (gnl|cdd|29257 : 95.4) no description available & (reliability: 1124.0) & (original description: Putative v1g108790, Description = Predicted protein, PFAM = PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'niben101scf02989_285692-290843' '(at4g21520 : 268.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G08390.1); Has 9857 Blast hits to 6114 proteins in 421 species: Archae - 34; Bacteria - 3288; Metazoa - 2459; Fungi - 1903; Plants - 847; Viruses - 0; Other Eukaryotes - 1326 (source: NCBI BLink). & (gnl|cdd|38130 : 215.0) no description available & (reliability: 536.0) & (original description: Putative Gnb5, Description = Telomerase Cajal body protein 1, PFAM = )' T '30.5' 'signalling.G-proteins' 'niben101scf03004_117146-138954' '(at4g38200 : 2205.0) SEC7-like guanine nucleotide exchange family protein; FUNCTIONS IN: binding, ARF guanyl-nucleotide exchange factor activity, guanyl-nucleotide exchange factor activity; INVOLVED IN: regulation of ARF protein signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904), Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF1981, SEC7 associated (InterPro:IPR015403); BEST Arabidopsis thaliana protein match is: SEC7-like guanine nucleotide exchange family protein (TAIR:AT4G35380.1); Has 2912 Blast hits to 2618 proteins in 244 species: Archae - 0; Bacteria - 32; Metazoa - 1541; Fungi - 604; Plants - 295; Viruses - 0; Other Eukaryotes - 440 (source: NCBI BLink). & (gnl|cdd|36147 : 1395.0) no description available & (gnl|cdd|34895 : 276.0) no description available & (reliability: 4410.0) & (original description: Putative BIG1, Description = Brefeldin A-inhibited guanine nucleotide-exchange protein 1, PFAM = PF12783;PF01369;PF16213;PF09324)' T '30.5' 'signalling.G-proteins' 'niben101scf03023_200635-205189' '(at5g60860 : 375.0) RAB GTPase homolog A1F (RABA1f); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1G (TAIR:AT3G15060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q40521|rb11b_tobac : 372.0) Ras-related protein Rab11B - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35310 : 339.0) no description available & (gnl|cdd|57954 : 317.0) no description available & (reliability: 750.0) & (original description: Putative rab, Description = Ras-related protein Rab-11A, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf03164_426592-430879' '(at4g28950 : 359.0) A member of ROP GTPase gene family.; RHO-related protein from plants 9 (ROP9); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Ras small GTPase, Ras type (InterPro:IPR003577), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RHO-related protein from plants 10 (TAIR:AT3G48040.1); Has 24641 Blast hits to 24616 proteins in 674 species: Archae - 9; Bacteria - 56; Metazoa - 12738; Fungi - 3855; Plants - 2680; Viruses - 20; Other Eukaryotes - 5283 (source: NCBI BLink). & (q68y52|rac2_orysa : 345.0) Rac-like GTP-binding protein 2 (OsRac2) - Oryza sativa (Rice) & (gnl|cdd|58016 : 330.0) no description available & (gnl|cdd|35614 : 281.0) no description available & (reliability: 718.0) & (original description: Putative rac1, Description = Putative rac protein, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf03169_443224-456490' '(at5g46070 : 1075.0) Guanylate-binding family protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: immune response; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Guanylate-binding protein, N-terminal (InterPro:IPR015894), Guanylate-binding protein, C-terminal (InterPro:IPR003191); BEST Arabidopsis thaliana protein match is: guanylate-binding family protein (TAIR:AT1G03830.2); Has 135716 Blast hits to 74856 proteins in 3470 species: Archae - 1642; Bacteria - 27962; Metazoa - 58309; Fungi - 11332; Plants - 7596; Viruses - 496; Other Eukaryotes - 28379 (source: NCBI BLink). & (gnl|cdd|85935 : 214.0) no description available & (gnl|cdd|37248 : 155.0) no description available & (reliability: 2150.0) & (original description: Putative Sb09g028440, Description = Putative uncharacterized protein Sb09g028440, PFAM = PF02263;PF02841)' T '30.5' 'signalling.G-proteins' 'niben101scf03215_316313-328351' '(at3g21700 : 290.0) Monomeric G protein. Expressed in root epidermal cells that are destined to become atrichoblasts. Also expressed during pollen development and in the pollen tube tip.; SGP2; FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Mitochondrial Rho-like (InterPro:IPR013684), GTPase, Tem1 (InterPro:IPR017231); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT5G54840.1); Has 12242 Blast hits to 12235 proteins in 404 species: Archae - 2; Bacteria - 22; Metazoa - 5958; Fungi - 1374; Plants - 1920; Viruses - 3; Other Eukaryotes - 2963 (source: NCBI BLink). & (gnl|cdd|36886 : 284.0) no description available & (gnl|cdd|58011 : 265.0) no description available & (reliability: 530.0) & (original description: Putative sgp1, Description = Monomeric G protein SGP1, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf03221_145060-154834' '(at3g17660 : 230.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes; AGD15 belongs to the class 4, together with AGD14.; ARF-GAP domain 15 (AGD15); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 5 (TAIR:AT5G54310.1); Has 3532 Blast hits to 3530 proteins in 241 species: Archae - 0; Bacteria - 0; Metazoa - 1821; Fungi - 633; Plants - 551; Viruses - 0; Other Eukaryotes - 527 (source: NCBI BLink). & (gnl|cdd|35922 : 164.0) no description available & (gnl|cdd|85433 : 143.0) no description available & (reliability: 460.0) & (original description: Putative AGD15, Description = Probable ADP-ribosylation factor GTPase-activating protein AGD15, PFAM = PF01412)' T '30.5' 'signalling.G-proteins' 'niben101scf03227_522508-528288' '(at5g17790 : 87.8) Encodes a 85.9 kDa protein containing novel repeats and zinc fingers described as protein interaction domains. VAR3 is a part of a protein complex required for normal chloroplast and palisade cell development. Mutants display a variegated phenotype due to somatic areas lacking or containing developmentally retarded chloroplasts and greatly reduced numbers of palisade cells.; VARIEGATED 3 (VAR3); FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: chloroplast organization; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: zinc finger (Ran-binding) family protein (TAIR:AT1G55040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative BnaA03g06720D, Description = Zinc finger protein VAR3, chloroplastic, PFAM = )' T '30.5' 'signalling.G-proteins' 'niben101scf03287_46772-52467' '(at1g52240 : 161.0) Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily .; RHO guanyl-nucleotide exchange factor 11 (ROPGEF11); CONTAINS InterPro DOMAIN/s: Dynein light chain, type 1/2 (InterPro:IPR001372); BEST Arabidopsis thaliana protein match is: Dynein light chain type 1 family protein (TAIR:AT3G16120.1); Has 1254 Blast hits to 1252 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 666; Fungi - 103; Plants - 255; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|38640 : 123.0) no description available & (gnl|cdd|85315 : 99.6) no description available & (q39580|dyl1_chlre : 84.0) Dynein 8 kDa light chain, flagellar outer arm - Chlamydomonas reinhardtii & (reliability: 322.0) & (original description: Putative umc1060, Description = Dynein light chain LC6, flagellar outer arm, PFAM = PF01221)' T '30.5' 'signalling.G-proteins' 'niben101scf03548_349481-373116' '(at5g13300 : 989.0) Belongs to 15-member small GTPase gene family, ARF-GAP domain proteins (AGD); corresponds to AGD3, and is one of four proteins belonging to class 1, together with AGD1, AGD2 and AGD4. The protein contains four domains: BAR domain, PH domain, an ARF-GAP domain, and two Ankyrin repeats. In sfc mutants, the secondary and tertiary veins of cotyledons, leaves, sepals and petals are largely replaced by small segments of discontinuous veins. sfc mutants have exaggerated responses to auxin.; SCARFACE (SFC); FUNCTIONS IN: ARF GTPase activator activity, phosphoinositide binding; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, phloem or xylem histogenesis, leaf morphogenesis; LOCATED IN: cytosol, trans-Golgi network transport vesicle, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), Pleckstrin homology-type (InterPro:IPR011993), Ankyrin repeat-containing domain (InterPro:IPR020683), BAR (InterPro:IPR004148), Pleckstrin homology (InterPro:IPR001849), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 1 (TAIR:AT5G61980.1); Has 64753 Blast hits to 27558 proteins in 1221 species: Archae - 110; Bacteria - 5131; Metazoa - 34265; Fungi - 4887; Plants - 2591; Viruses - 654; Other Eukaryotes - 17115 (source: NCBI BLink). & (gnl|cdd|35741 : 503.0) no description available & (gnl|cdd|85433 : 138.0) no description available & (reliability: 1978.0) & (original description: Putative AGD3, Description = ADP-ribosylation factor GTPase-activating protein AGD3, PFAM = PF00169;PF01412;PF16746;PF13637)' T '30.5' 'signalling.G-proteins' 'niben101scf03595_1577191-1583678' '(at3g18610 : 169.0) Encodes ATNUC-L2 (NUCLEOLIN LIKE 2).; nucleolin like 2 (NUC-L2); FUNCTIONS IN: nucleotide binding, nucleic acid binding; EXPRESSED IN: egg cell, cultured cell; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: nucleolin like 1 (TAIR:AT1G48920.1); Has 220619 Blast hits to 110675 proteins in 3421 species: Archae - 647; Bacteria - 30556; Metazoa - 92066; Fungi - 36057; Plants - 14337; Viruses - 1241; Other Eukaryotes - 45715 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative NNF1, Description = Tobacco nucleolin, PFAM = PF00076;PF00076)' T '30.5' 'signalling.G-proteins' 'niben101scf03634_167585-185172' '(at5g17790 : 348.0) Encodes a 85.9 kDa protein containing novel repeats and zinc fingers described as protein interaction domains. VAR3 is a part of a protein complex required for normal chloroplast and palisade cell development. Mutants display a variegated phenotype due to somatic areas lacking or containing developmentally retarded chloroplasts and greatly reduced numbers of palisade cells.; VARIEGATED 3 (VAR3); FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: chloroplast organization; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: zinc finger (Ran-binding) family protein (TAIR:AT1G55040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39399 : 80.9) no description available & (reliability: 696.0) & (original description: Putative glysoja_021670, Description = Zinc finger protein VAR3, chloroplastic, PFAM = PF00641;PF00641)' T '30.5' 'signalling.G-proteins' 'niben101scf03679_206777-216858' '(at3g54190 : 786.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G38630.1); Has 138 Blast hits to 136 proteins in 32 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 1572.0) & (original description: Putative)' T '30.5' 'signalling.G-proteins' 'niben101scf03716_20153-26944' '(at5g58590 : 224.0) Encodes a Ran-binding protein 1 homolog (RanBP1).; RAN binding protein 1 (RANBP1); FUNCTIONS IN: protein binding; INVOLVED IN: protein import into nucleus, translocation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein 1 (InterPro:IPR000156), Pleckstrin homology-type (InterPro:IPR011993); BEST Arabidopsis thaliana protein match is: Pleckstrin homology (PH) domain superfamily protein (TAIR:AT2G30060.1); Has 1560 Blast hits to 1231 proteins in 240 species: Archae - 0; Bacteria - 8; Metazoa - 836; Fungi - 365; Plants - 158; Viruses - 15; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|29845 : 135.0) no description available & (gnl|cdd|36082 : 96.3) no description available & (reliability: 448.0) & (original description: Putative RANBP1B, Description = Ran-binding protein 1 homolog b, PFAM = PF00638)' T '30.5' 'signalling.G-proteins' 'niben101scf03737_285389-307199' '(at5g52580 : 549.0) RabGAP/TBC domain-containing protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195), Protein of unknown function DUF3548 (InterPro:IPR021935); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT4G27100.2). & (gnl|cdd|37408 : 293.0) no description available & (gnl|cdd|47500 : 170.0) no description available & (reliability: 1098.0) & (original description: Putative gyp7, Description = GTPase-activating protein GYP7, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben101scf03775_120370-128904' '(p29687|rab5_tobac : 367.0) Ras-related protein Rab5 - Nicotiana tabacum (Common tobacco) & (at5g45130 : 309.0) small GTP binding protein; RAB homolog 1 (RHA1); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab5-related (InterPro:IPR015599); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT4G19640.1); Has 26267 Blast hits to 26237 proteins in 716 species: Archae - 26; Bacteria - 136; Metazoa - 13722; Fungi - 3681; Plants - 2979; Viruses - 20; Other Eukaryotes - 5703 (source: NCBI BLink). & (gnl|cdd|57946 : 288.0) no description available & (gnl|cdd|35315 : 279.0) no description available & (reliability: 618.0) & (original description: Putative RAB5, Description = Ras-related protein Rab5, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf03778_228061-230606' '(at1g55190 : 188.0) PRA7; INVOLVED IN: vesicle-mediated transport; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: PRA1 (Prenylated rab acceptor) family protein (TAIR:AT3G13720.1); Has 523 Blast hits to 523 proteins in 128 species: Archae - 0; Bacteria - 0; Metazoa - 75; Fungi - 90; Plants - 309; Viruses - 6; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|38352 : 186.0) no description available & (gnl|cdd|86276 : 144.0) no description available & (reliability: 344.0) & (original description: Putative PRA1F2, Description = PRA1 family protein F2, PFAM = PF03208)' T '30.5' 'signalling.G-proteins' 'niben101scf03779_909807-912590' '(q40193|rb11c_lotja : 352.0) Ras-related protein Rab11C - Lotus japonicus & (at1g07410 : 348.0) RAB GTPase homolog A2B (RABA2b); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: intracellular protein transport, signal transduction, nucleocytoplasmic transport, protein transport, small GTPase mediated signal transduction; LOCATED IN: endosome, plasma membrane, cell plate; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041), ADP-ribosylation factor (InterPro:IPR006688), Ras (InterPro:IPR013753), Ras small GTPase, Ras type (InterPro:IPR003577), Rab11-related (InterPro:IPR015595), Small GTPase, Rho type (InterPro:IPR003578), Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A2D (TAIR:AT5G59150.1); Has 28965 Blast hits to 28914 proteins in 772 species: Archae - 29; Bacteria - 152; Metazoa - 15139; Fungi - 4328; Plants - 3313; Viruses - 20; Other Eukaryotes - 5984 (source: NCBI BLink). & (gnl|cdd|35310 : 327.0) no description available & (gnl|cdd|57954 : 315.0) no description available & (reliability: 696.0) & (original description: Putative RGP2, Description = Ras-related protein RGP2, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf03809_272025-279490' '(at5g61530 : 508.0) small G protein family protein / RhoGAP family protein; FUNCTIONS IN: Rho GTPase activator activity; INVOLVED IN: signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198). & (gnl|cdd|84905 : 120.0) no description available & (gnl|cdd|39607 : 86.2) no description available & (reliability: 1016.0) & (original description: Putative At5g61530, Description = Uncharacterized Rho GTPase-activating protein At5g61530, PFAM = PF00620)' T '30.5' 'signalling.G-proteins' 'niben101scf03817_1109249-1118596' '(at1g08410 : 706.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G27200.1); Has 7267 Blast hits to 7158 proteins in 1932 species: Archae - 109; Bacteria - 4700; Metazoa - 622; Fungi - 502; Plants - 285; Viruses - 0; Other Eukaryotes - 1049 (source: NCBI BLink). & (gnl|cdd|36638 : 536.0) no description available & (gnl|cdd|31355 : 167.0) no description available & (reliability: 1412.0) & (original description: Putative lsg1, Description = Large subunit GTPase 1, PFAM = PF01926)' T '30.5' 'signalling.G-proteins' 'niben101scf03842_994092-1000020' '(at5g58590 : 221.0) Encodes a Ran-binding protein 1 homolog (RanBP1).; RAN binding protein 1 (RANBP1); FUNCTIONS IN: protein binding; INVOLVED IN: protein import into nucleus, translocation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein 1 (InterPro:IPR000156), Pleckstrin homology-type (InterPro:IPR011993); BEST Arabidopsis thaliana protein match is: Pleckstrin homology (PH) domain superfamily protein (TAIR:AT2G30060.1); Has 1560 Blast hits to 1231 proteins in 240 species: Archae - 0; Bacteria - 8; Metazoa - 836; Fungi - 365; Plants - 158; Viruses - 15; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|29845 : 137.0) no description available & (gnl|cdd|36082 : 91.7) no description available & (reliability: 442.0) & (original description: Putative sbp1, Description = Ran-specific GTPase-activating protein, PFAM = PF00638)' T '30.5' 'signalling.G-proteins' 'niben101scf03849_3346-9042' '(at5g02010 : 615.0) Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.; RHO guanyl-nucleotide exchange factor 7 (ROPGEF7); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: ROP guanine nucleotide exchange factor 5 (TAIR:AT5G05940.1); Has 310 Blast hits to 307 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 308; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|67377 : 525.0) no description available & (reliability: 1230.0) & (original description: Putative ROPGEF7, Description = Rop guanine nucleotide exchange factor 7, PFAM = PF03759)' T '30.5' 'signalling.G-proteins' 'niben101scf03865_634755-639581' '(at4g35750 : 258.0) SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); BEST Arabidopsis thaliana protein match is: SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (TAIR:AT3G10210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37844 : 98.5) no description available & (reliability: 516.0) & (original description: Putative , Description = , PFAM = PF13716)' T '30.5' 'signalling.G-proteins' 'niben101scf04033_320456-329767' '(at5g22400 : 462.0) Rho GTPase activating protein with PAK-box/P21-Rho-binding domain; FUNCTIONS IN: Rac GTPase activator activity; INVOLVED IN: signal transduction; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095), Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198); BEST Arabidopsis thaliana protein match is: rac GTPase activating protein (TAIR:AT3G11490.1); Has 3977 Blast hits to 3976 proteins in 184 species: Archae - 0; Bacteria - 0; Metazoa - 2927; Fungi - 443; Plants - 206; Viruses - 0; Other Eukaryotes - 401 (source: NCBI BLink). & (gnl|cdd|39471 : 285.0) no description available & (gnl|cdd|63840 : 106.0) no description available & (reliability: 924.0) & (original description: Putative ROPGAP1, Description = Rho GTPase-activating protein 1, PFAM = PF00620;PF00786)' T '30.5' 'signalling.G-proteins' 'niben101scf04073_22972-45014' '(at4g27100 : 631.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT5G54780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37408 : 354.0) no description available & (gnl|cdd|47500 : 131.0) no description available & (reliability: 1262.0) & (original description: Putative At4g27100, Description = Putative uncharacterized protein At4g27100, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben101scf04096_228671-242295' '(at4g25540 : 1159.0) encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH3 heterodimers bound 'insertion-deletion' DNA with three nucleotides (+AAG) or one nucleotide (+T) looped out much better than they bound DNA with a base/base mispair (T/G).; homolog of DNA mismatch repair protein MSH3 (MSH3); CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695); BEST Arabidopsis thaliana protein match is: MUTS homolog 6 (TAIR:AT4G02070.2); Has 14547 Blast hits to 13713 proteins in 2703 species: Archae - 153; Bacteria - 9793; Metazoa - 705; Fungi - 864; Plants - 451; Viruses - 3; Other Eukaryotes - 2578 (source: NCBI BLink). & (gnl|cdd|35439 : 976.0) no description available & (gnl|cdd|30598 : 509.0) no description available & (q9xgc9|msh2_maize : 204.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 2318.0) & (original description: Putative MSH3, Description = DNA mismatch repair protein MSH3, PFAM = PF05190;PF05192;PF01624;PF05188;PF00488)' T '30.5' 'signalling.G-proteins' 'niben101scf04283_824781-829063' '(at5g27540 : 461.0) Encodes a protein with similarity to GTPases that is localized to the mitochondrion. Involved in embryogenesis, pollen tube growth and required for mitochondrial development.; MIRO-related GTP-ase 1 (MIRO1); FUNCTIONS IN: GTP binding; INVOLVED IN: pollen tube growth, mitochondrion organization, embryo development, embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF hand associated, type-1 (InterPro:IPR013566), Mitochondrial Rho-like (InterPro:IPR013684), EF hand associated, type-2 (InterPro:IPR013567), Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Mitochondrial Rho GTPase (InterPro:IPR021181), MIRO (InterPro:IPR020860); BEST Arabidopsis thaliana protein match is: MIRO-related GTP-ase 2 (TAIR:AT3G63150.1); Has 8016 Blast hits to 7980 proteins in 467 species: Archae - 6; Bacteria - 176; Metazoa - 4167; Fungi - 1485; Plants - 887; Viruses - 0; Other Eukaryotes - 1295 (source: NCBI BLink). & (gnl|cdd|36919 : 438.0) no description available & (gnl|cdd|57976 : 239.0) no description available & (reliability: 922.0) & (original description: Putative MIRO2, Description = MIRO2, PFAM = PF00071;PF08356)' T '30.5' 'signalling.G-proteins' 'niben101scf04286_160631-166071' '(at1g31930 : 426.0) Encodes XLG3 (extra-large G protein 3) that shows significant similarity to the G protein alpha subunit in its C terminal region. Involved in the regulation of root morphological and growth responses.; extra-large GTP-binding protein 3 (XLG3); FUNCTIONS IN: signal transducer activity, guanyl nucleotide binding; INVOLVED IN: in 11 processes; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Guanine nucleotide binding protein (G-protein), alpha subunit (InterPro:IPR001019), G protein alpha subunit, helical insertion (InterPro:IPR011025); BEST Arabidopsis thaliana protein match is: extra-large G-protein 1 (TAIR:AT2G23460.1). & (reliability: 852.0) & (original description: Putative BnaC08g41460D, Description = BnaC08g41460D protein, PFAM = )' T '30.5' 'signalling.G-proteins' 'niben101scf04329_687344-693297' '(at5g22400 : 397.0) Rho GTPase activating protein with PAK-box/P21-Rho-binding domain; FUNCTIONS IN: Rac GTPase activator activity; INVOLVED IN: signal transduction; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095), Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198); BEST Arabidopsis thaliana protein match is: rac GTPase activating protein (TAIR:AT3G11490.1); Has 3977 Blast hits to 3976 proteins in 184 species: Archae - 0; Bacteria - 0; Metazoa - 2927; Fungi - 443; Plants - 206; Viruses - 0; Other Eukaryotes - 401 (source: NCBI BLink). & (gnl|cdd|39471 : 301.0) no description available & (gnl|cdd|63840 : 109.0) no description available & (reliability: 794.0) & (original description: Putative ROPGAP1, Description = Rho GTPase-activating protein 1, PFAM = PF00786;PF00620)' T '30.5' 'signalling.G-proteins' 'niben101scf04339_442483-451981' '(at5g54840 : 321.0) Monomeric G protein. Expressed in the root quiescent center, flowers, and leaf guard cells and hydathodes.; SGP1; FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTPase (InterPro:IPR020851), Mitochondrial Rho-like (InterPro:IPR013684), GTPase, Tem1 (InterPro:IPR017231); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT3G21700.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36886 : 296.0) no description available & (gnl|cdd|58011 : 281.0) no description available & (reliability: 642.0) & (original description: Putative sgp1, Description = Monomeric G protein SGP1, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf04383_165361-173184' '(at2g23460 : 724.0) encodes a novel G-alpha protein that shares similarity to plant, yeast, and animal G-alpha proteins at the C-terminus. It contains an N-terminus that is as large as the C-terminus, is a member of a small family, and is expressed in all tissues examined, including roots, leaves, stems, flowers, and fruits.; extra-large G-protein 1 (XLG1); FUNCTIONS IN: signal transducer activity, guanyl nucleotide binding; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Guanine nucleotide binding protein (G-protein), alpha subunit (InterPro:IPR001019), G protein alpha subunit, helical insertion (InterPro:IPR011025); BEST Arabidopsis thaliana protein match is: extra-large GTP-binding protein 3 (TAIR:AT1G31930.3); Has 3427 Blast hits to 3422 proteins in 394 species: Archae - 0; Bacteria - 2; Metazoa - 2220; Fungi - 618; Plants - 355; Viruses - 0; Other Eukaryotes - 232 (source: NCBI BLink). & (gnl|cdd|35305 : 242.0) no description available & (gnl|cdd|57932 : 225.0) no description available & (p93163|gpa2_soybn : 161.0) Guanine nucleotide-binding protein alpha-2 subunit (GP-alpha-2) - Glycine max (Soybean) & (reliability: 1448.0) & (original description: Putative XLG1, Description = Extra-large guanine nucleotide-binding protein 1, PFAM = PF00503)' T '30.5' 'signalling.G-proteins' 'niben101scf04424_464770-467823' '(at1g52380 : 268.0) NUP50 (Nucleoporin 50 kDa) protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular transport; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein 1 (InterPro:IPR000156), Pleckstrin homology-type (InterPro:IPR011993), Nuclear pore complex, NUP2/50/61 (InterPro:IPR015007); BEST Arabidopsis thaliana protein match is: NUP50 (Nucleoporin 50 kDa) protein (TAIR:AT3G15970.1); Has 1614 Blast hits to 1303 proteins in 238 species: Archae - 0; Bacteria - 48; Metazoa - 835; Fungi - 410; Plants - 179; Viruses - 3; Other Eukaryotes - 139 (source: NCBI BLink). & (gnl|cdd|29845 : 106.0) no description available & (reliability: 536.0) & (original description: Putative NUP50B, Description = Nuclear pore complex protein NUP50B, PFAM = PF08911;PF00638)' T '30.5' 'signalling.G-proteins' 'niben101scf04473_246061-250455' '(gnl|cdd|35300 : 334.0) no description available & (gnl|cdd|57938 : 329.0) no description available & (at4g02080 : 306.0) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.; secretion-associated RAS super family 2 (SAR2); FUNCTIONS IN: GTP binding; INVOLVED IN: intracellular protein transport; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT3G62560.1); Has 6784 Blast hits to 6782 proteins in 374 species: Archae - 2; Bacteria - 40; Metazoa - 3245; Fungi - 1245; Plants - 1081; Viruses - 0; Other Eukaryotes - 1171 (source: NCBI BLink). & (o04266|sar1a_bracm : 303.0) GTP-binding protein SAR1A - Brassica campestris (Field mustard) & (reliability: 612.0) & (original description: Putative SAR1A, Description = GTP-binding protein SAR1A, PFAM = PF00025)' T '30.5' 'signalling.G-proteins' 'niben101scf04494_97796-100072' '(at1g52240 : 161.0) Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily .; RHO guanyl-nucleotide exchange factor 11 (ROPGEF11); CONTAINS InterPro DOMAIN/s: Dynein light chain, type 1/2 (InterPro:IPR001372); BEST Arabidopsis thaliana protein match is: Dynein light chain type 1 family protein (TAIR:AT3G16120.1); Has 1254 Blast hits to 1252 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 666; Fungi - 103; Plants - 255; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|38640 : 120.0) no description available & (gnl|cdd|85315 : 95.0) no description available & (q39580|dyl1_chlre : 80.1) Dynein 8 kDa light chain, flagellar outer arm - Chlamydomonas reinhardtii & (reliability: 322.0) & (original description: Putative BnaC05g37270D, Description = BnaC05g37270D protein, PFAM = PF01221)' T '30.5' 'signalling.G-proteins' 'niben101scf04778_38439-47094' '(p31022|rab7_pea : 398.0) Ras-related protein Rab7 - Pisum sativum (Garden pea) & (at3g18820 : 396.0) RAB GTPase homolog G3F (RAB7B); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog G3E (TAIR:AT1G49300.2); Has 26432 Blast hits to 26399 proteins in 759 species: Archae - 38; Bacteria - 171; Metazoa - 13566; Fungi - 4011; Plants - 2887; Viruses - 20; Other Eukaryotes - 5739 (source: NCBI BLink). & (gnl|cdd|35615 : 345.0) no description available & (gnl|cdd|57948 : 332.0) no description available & (reliability: 792.0) & (original description: Putative rab7, Description = Ras-related protein Rab7, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf04785_90177-100867' '(at3g05010 : 322.0) Protein of unknown function, transmembrane-40; CONTAINS InterPro DOMAIN/s: Protein of unknown function, transmembrane-40 (InterPro:IPR018781); BEST Arabidopsis thaliana protein match is: Protein of unknown function, transmembrane-40 (TAIR:AT5G27210.1); Has 134 Blast hits to 134 proteins in 47 species: Archae - 0; Bacteria - 6; Metazoa - 78; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|39736 : 263.0) no description available & (reliability: 644.0) & (original description: Putative At3g05010, Description = Candidate G-protein coupled receptor 2, PFAM = PF10160)' T '30.5' 'signalling.G-proteins' 'niben101scf04886_53000-59282' '(at2g37670 : 743.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G02430.1); Has 38438 Blast hits to 23319 proteins in 700 species: Archae - 52; Bacteria - 5411; Metazoa - 15006; Fungi - 8500; Plants - 4706; Viruses - 3; Other Eukaryotes - 4760 (source: NCBI BLink). & (gnl|cdd|35504 : 520.0) no description available & (gnl|cdd|29257 : 133.0) no description available & (reliability: 1354.0) & (original description: Putative At2g37670, Description = Putative WD-40 repeat protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'niben101scf04926_662370-668923' '(at3g54190 : 812.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G38630.1); Has 138 Blast hits to 136 proteins in 32 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 1624.0) & (original description: Putative)' T '30.5' 'signalling.G-proteins' 'niben101scf05009_249182-268938' '(at3g55020 : 820.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G39280.1); Has 8291 Blast hits to 7654 proteins in 526 species: Archae - 15; Bacteria - 632; Metazoa - 4273; Fungi - 1225; Plants - 609; Viruses - 33; Other Eukaryotes - 1504 (source: NCBI BLink). & (gnl|cdd|37269 : 259.0) no description available & (gnl|cdd|47500 : 173.0) no description available & (reliability: 1640.0) & (original description: Putative BnaC08g25870D, Description = BnaC08g25870D protein, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben101scf05044_90387-93730' '(at1g52380 : 242.0) NUP50 (Nucleoporin 50 kDa) protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular transport; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein 1 (InterPro:IPR000156), Pleckstrin homology-type (InterPro:IPR011993), Nuclear pore complex, NUP2/50/61 (InterPro:IPR015007); BEST Arabidopsis thaliana protein match is: NUP50 (Nucleoporin 50 kDa) protein (TAIR:AT3G15970.1); Has 1614 Blast hits to 1303 proteins in 238 species: Archae - 0; Bacteria - 48; Metazoa - 835; Fungi - 410; Plants - 179; Viruses - 3; Other Eukaryotes - 139 (source: NCBI BLink). & (gnl|cdd|29845 : 101.0) no description available & (reliability: 484.0) & (original description: Putative NUP50A, Description = Nuclear pore complex protein NUP50A, PFAM = PF00638;PF08911)' T '30.5' 'signalling.G-proteins' 'niben101scf05063_4258-9887' '(q39435|rac1_betvu : 354.0) Rac-like GTP-binding protein RHO1 (RHO1Bv) - Beta vulgaris (Sugar beet) & (at3g51300 : 352.0) Encodes a pollen-specific Rop GTPase, member of the Rho family of small GTP binding proteins that interacts with RIC3 and RIC4 to control tip growth in pollen tubes. These three proteins promote the proper targeting of exocytic vesicles in the pollen tube tip. ROP1 activity is regulated by the REN1 GTPase activator protein.; RHO-related protein from plants 1 (ROP1); CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: Arabidopsis RAC-like 1 (TAIR:AT2G17800.2); Has 24331 Blast hits to 24300 proteins in 680 species: Archae - 9; Bacteria - 65; Metazoa - 12719; Fungi - 3503; Plants - 2700; Viruses - 20; Other Eukaryotes - 5315 (source: NCBI BLink). & (gnl|cdd|58016 : 334.0) no description available & (gnl|cdd|35614 : 294.0) no description available & (reliability: 704.0) & (original description: Putative ARAC11, Description = Rac-like GTP-binding protein ARAC11, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf05094_65972-70903' '(at5g05940 : 626.0) Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.; ROP guanine nucleotide exchange factor 5 (ROPGEF5); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 7 (TAIR:AT5G02010.1); Has 303 Blast hits to 301 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 303; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67377 : 532.0) no description available & (reliability: 1252.0) & (original description: Putative ROPGEF5, Description = Rop guanine nucleotide exchange factor 5, PFAM = PF03759)' T '30.5' 'signalling.G-proteins' 'niben101scf05137_246838-254353' '(at3g11402 : 298.0) Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), Prenylated rab acceptor PRA1 (InterPro:IPR004895), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT3G11385.1). & (gnl|cdd|86276 : 105.0) no description available & (reliability: 550.0) & (original description: Putative PRA1A1, Description = PRA1 family protein A1, PFAM = PF03208)' T '30.5' 'signalling.G-proteins' 'niben101scf05173_35216-40611' '(at1g02130 : 363.0) Belongs to the Rab1 GTPase subfamily. This small GTP-binding protein is required in ER to Golgi transportation.; RAS 5 (RA-5); FUNCTIONS IN: GTP binding; INVOLVED IN: response to cadmium ion, ER to Golgi vesicle-mediated transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 1A (TAIR:AT5G47200.1); Has 30420 Blast hits to 30350 proteins in 816 species: Archae - 27; Bacteria - 199; Metazoa - 15882; Fungi - 4318; Plants - 3658; Viruses - 20; Other Eukaryotes - 6316 (source: NCBI BLink). & (p40392|ric1_orysa : 362.0) Ras-related protein RIC1 - Oryza sativa (Rice) & (gnl|cdd|35307 : 328.0) no description available & (gnl|cdd|57955 : 319.0) no description available & (reliability: 726.0) & (original description: Putative RABD2A, Description = Ras-related protein RABD2a, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf05183_905425-916536' '(at2g44100 : 789.0) GDP dissociation inhibitor involved in vesicular membrane traffic; guanosine nucleotide diphosphate dissociation inhibitor 1 (GDI1); CONTAINS InterPro DOMAIN/s: Rab GTPase activator (InterPro:IPR002005), GDP dissociation inhibitor (InterPro:IPR018203), Rab GDI protein (InterPro:IPR000806); BEST Arabidopsis thaliana protein match is: RAB GDP dissociation inhibitor 2 (TAIR:AT3G59920.1); Has 1320 Blast hits to 1214 proteins in 252 species: Archae - 2; Bacteria - 0; Metazoa - 653; Fungi - 281; Plants - 182; Viruses - 0; Other Eukaryotes - 202 (source: NCBI BLink). & (gnl|cdd|64840 : 721.0) no description available & (gnl|cdd|36652 : 650.0) no description available & (reliability: 1578.0) & (original description: Putative gdi, Description = GDP dissociation inhibitor, PFAM = PF00996)' T '30.5' 'signalling.G-proteins' 'niben101scf05201_877436-907222' '(at5g19390 : 831.0) Encodes a protein with similarity to REN1, a Rho GTPase activating protein.; Rho GTPase activation protein (RhoGAP) with PH domain; FUNCTIONS IN: Rho GTPase activator activity, phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Rho GTPase activation protein (InterPro:IPR008936), Pleckstrin homology (InterPro:IPR001849), RhoGAP (InterPro:IPR000198); BEST Arabidopsis thaliana protein match is: Rho GTPase activation protein (RhoGAP) with PH domain (TAIR:AT5G12150.2); Has 4185 Blast hits to 4168 proteins in 202 species: Archae - 0; Bacteria - 9; Metazoa - 3193; Fungi - 416; Plants - 210; Viruses - 0; Other Eukaryotes - 357 (source: NCBI BLink). & (gnl|cdd|39472 : 456.0) no description available & (gnl|cdd|84905 : 128.0) no description available & (reliability: 1568.0) & (original description: Putative ROPGAP7, Description = Rho GTPase-activating protein 7, PFAM = PF14389;PF00620;PF00169)' T '30.5' 'signalling.G-proteins' 'niben101scf05269_368259-377995' '(at1g78010 : 665.0) tRNA modification GTPase, putative; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: small GTPase mediated signal transduction, tRNA modification; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Ras GTPase (InterPro:IPR001806), tRNA modification GTPase TrmE (InterPro:IPR004520), GTP-binding protein TrmE, N-terminal (InterPro:IPR018948), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT3G12080.1); Has 37224 Blast hits to 31482 proteins in 3092 species: Archae - 387; Bacteria - 27903; Metazoa - 467; Fungi - 287; Plants - 322; Viruses - 0; Other Eukaryotes - 7858 (source: NCBI BLink). & (gnl|cdd|81504 : 490.0) no description available & (gnl|cdd|36405 : 414.0) no description available & (reliability: 1330.0) & (original description: Putative mnmE, Description = tRNA modification GTPase MnmE, PFAM = PF10396;PF01926;PF12631)' T '30.5' 'signalling.G-proteins' 'niben101scf05283_26003-34441' '(at4g05410 : 481.0) Encodes a nucleolar protein with seven WD40-repeats that plays a role in embryo sac development and is critical for the correct positioning of the division plane of zygote and the apical cell lineage in Arabidopsis. YAO may act by modulating nucleolar function, such as rRNA biogenesis, during early embryogenesis and gametogenesis.; YAOZHE (YAO); FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: acceptance of pollen, mitochondrial fission, embryo sac development, embryo development ending in seed dormancy; LOCATED IN: nucleolus, anaphase-promoting complex, small nucleolar ribonucleoprotein complex, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G21130.1); Has 47131 Blast hits to 24802 proteins in 761 species: Archae - 50; Bacteria - 6358; Metazoa - 18156; Fungi - 10195; Plants - 5539; Viruses - 94; Other Eukaryotes - 6739 (source: NCBI BLink). & (gnl|cdd|35520 : 457.0) no description available & (gnl|cdd|29257 : 142.0) no description available & (o24076|gblp_medsa : 87.0) Guanine nucleotide-binding protein subunit beta-like protein - Medicago sativa (Alfalfa) & (reliability: 962.0) & (original description: Putative YAO, Description = U3 snoRNP-associated protein-like YAO, PFAM = PF00400;PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'niben101scf05336_14709-20496' '(at4g02080 : 340.0) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.; secretion-associated RAS super family 2 (SAR2); FUNCTIONS IN: GTP binding; INVOLVED IN: intracellular protein transport; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT3G62560.1); Has 6784 Blast hits to 6782 proteins in 374 species: Archae - 2; Bacteria - 40; Metazoa - 3245; Fungi - 1245; Plants - 1081; Viruses - 0; Other Eukaryotes - 1171 (source: NCBI BLink). & (o04266|sar1a_bracm : 335.0) GTP-binding protein SAR1A - Brassica campestris (Field mustard) & (gnl|cdd|35300 : 324.0) no description available & (gnl|cdd|57938 : 322.0) no description available & (reliability: 680.0) & (original description: Putative sar1, Description = GTP-binding protein SAR1b, PFAM = PF00025)' T '30.5' 'signalling.G-proteins' 'niben101scf05351_14167-18050' '(q40523|rb11a_tobac : 383.0) Ras-related protein Rab11A - Nicotiana tabacum (Common tobacco) & (at1g07410 : 355.0) RAB GTPase homolog A2B (RABA2b); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: intracellular protein transport, signal transduction, nucleocytoplasmic transport, protein transport, small GTPase mediated signal transduction; LOCATED IN: endosome, plasma membrane, cell plate; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041), ADP-ribosylation factor (InterPro:IPR006688), Ras (InterPro:IPR013753), Ras small GTPase, Ras type (InterPro:IPR003577), Rab11-related (InterPro:IPR015595), Small GTPase, Rho type (InterPro:IPR003578), Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A2D (TAIR:AT5G59150.1); Has 28965 Blast hits to 28914 proteins in 772 species: Archae - 29; Bacteria - 152; Metazoa - 15139; Fungi - 4328; Plants - 3313; Viruses - 20; Other Eukaryotes - 5984 (source: NCBI BLink). & (gnl|cdd|35310 : 341.0) no description available & (gnl|cdd|57954 : 316.0) no description available & (reliability: 710.0) & (original description: Putative RAB11A, Description = Ras-related protein Rab11A, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf05381_443550-452405' '(at3g22942 : 84.0) heterotrimeric G-protein gamma subunit 2(AGG2); G-protein gamma subunit 2 (AGG2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: basipetal auxin transport, seed germination, lateral root development; LOCATED IN: plasma membrane, heterotrimeric G-protein complex; EXPRESSED IN: hydathode, root cortex, root epidermis, differentiation zone, guard cell; BEST Arabidopsis thaliana protein match is: Ggamma-subunit 1 (TAIR:AT3G63420.2); Has 82 Blast hits to 82 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative GG2, Description = Guanine nucleotide-binding protein subunit gamma 2, PFAM = PF00631)' T '30.5' 'signalling.G-proteins' 'niben101scf05385_105155-111507' '(at4g38430 : 498.0) Member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily, also known as DUF315). Interacts with ROP1 but the whole protein lacks Rho guanyl-nucleotide exchange factor activity in vitro. The DUF315/PRONE domain is sufficient to confer RopGEF catalytic activity.; rho guanyl-nucleotide exchange factor 1 (ROPGEF1); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 7 (TAIR:AT5G02010.1); Has 308 Blast hits to 304 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 308; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67377 : 412.0) no description available & (reliability: 996.0) & (original description: Putative ROPGEF1, Description = Rop guanine nucleotide exchange factor 1, PFAM = PF03759)' T '30.5' 'signalling.G-proteins' 'niben101scf05389_114482-119968' '(at2g37670 : 719.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G02430.1); Has 38438 Blast hits to 23319 proteins in 700 species: Archae - 52; Bacteria - 5411; Metazoa - 15006; Fungi - 8500; Plants - 4706; Viruses - 3; Other Eukaryotes - 4760 (source: NCBI BLink). & (gnl|cdd|35504 : 543.0) no description available & (gnl|cdd|29257 : 137.0) no description available & (reliability: 1426.0) & (original description: Putative BnaC03g00750D, Description = BnaC03g00750D protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'niben101scf05391_131910-135277' '(at5g60860 : 367.0) RAB GTPase homolog A1F (RABA1f); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1G (TAIR:AT3G15060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q40521|rb11b_tobac : 363.0) Ras-related protein Rab11B - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35310 : 344.0) no description available & (gnl|cdd|57954 : 315.0) no description available & (reliability: 734.0) & (original description: Putative RABA1F, Description = Ras-related protein RABA1f, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf05391_240738-255146' '(at5g46070 : 1112.0) Guanylate-binding family protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: immune response; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Guanylate-binding protein, N-terminal (InterPro:IPR015894), Guanylate-binding protein, C-terminal (InterPro:IPR003191); BEST Arabidopsis thaliana protein match is: guanylate-binding family protein (TAIR:AT1G03830.2); Has 135716 Blast hits to 74856 proteins in 3470 species: Archae - 1642; Bacteria - 27962; Metazoa - 58309; Fungi - 11332; Plants - 7596; Viruses - 496; Other Eukaryotes - 28379 (source: NCBI BLink). & (gnl|cdd|85935 : 216.0) no description available & (gnl|cdd|37248 : 152.0) no description available & (reliability: 2224.0) & (original description: Putative At5g46070, Description = Guanylate-binding protein, PFAM = PF02841;PF02263)' T '30.5' 'signalling.G-proteins' 'niben101scf05516_325009-359455' '(at3g07880 : 189.0) SUPERCENTIPEDE1 (SCN1); FUNCTIONS IN: Rho GDP-dissociation inhibitor activity; INVOLVED IN: root epidermal cell differentiation, cell tip growth; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), RHO protein GDP dissociation inhibitor (InterPro:IPR000406); BEST Arabidopsis thaliana protein match is: Immunoglobulin E-set superfamily protein (TAIR:AT1G62450.1); Has 660 Blast hits to 660 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 325; Fungi - 162; Plants - 120; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|38415 : 182.0) no description available & (gnl|cdd|65863 : 107.0) no description available & (reliability: 378.0) & (original description: Putative rhoGDI1, Description = Rho GDP dissociation inhibitor 1, PFAM = PF02115)' T '30.5' 'signalling.G-proteins' 'niben101scf05559_255359-263565' '(at4g02790 : 428.0) GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917), GTP-binding protein, ribosome biogenesis, YlqF (InterPro:IPR019991); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G41670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|83086 : 295.0) no description available & (gnl|cdd|37695 : 252.0) no description available & (reliability: 856.0) & (original description: Putative DGP3, Description = DAR GTPase 3, chloroplastic, PFAM = PF01926)' T '30.5' 'signalling.G-proteins' 'niben101scf05617_195382-198971' '(at1g01200 : 300.0) RAB GTPase homolog A3 (RABA3); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: endosome, nucleus, cell plate; EXPRESSED IN: lateral root cap, hypocotyl, root, flower, epidermis; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A4C (TAIR:AT5G47960.1); Has 27164 Blast hits to 27137 proteins in 734 species: Archae - 19; Bacteria - 134; Metazoa - 14292; Fungi - 3779; Plants - 3194; Viruses - 20; Other Eukaryotes - 5726 (source: NCBI BLink). & (gnl|cdd|35310 : 293.0) no description available & (gnl|cdd|57954 : 293.0) no description available & (p25766|rgp1_orysa : 278.0) Ras-related protein RGP1 (GTP-binding regulatory protein RGP1) - Oryza sativa (Rice) & (reliability: 600.0) & (original description: Putative pra2, Description = PRA2, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf05674_481216-491671' '(at2g23460 : 1019.0) encodes a novel G-alpha protein that shares similarity to plant, yeast, and animal G-alpha proteins at the C-terminus. It contains an N-terminus that is as large as the C-terminus, is a member of a small family, and is expressed in all tissues examined, including roots, leaves, stems, flowers, and fruits.; extra-large G-protein 1 (XLG1); FUNCTIONS IN: signal transducer activity, guanyl nucleotide binding; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Guanine nucleotide binding protein (G-protein), alpha subunit (InterPro:IPR001019), G protein alpha subunit, helical insertion (InterPro:IPR011025); BEST Arabidopsis thaliana protein match is: extra-large GTP-binding protein 3 (TAIR:AT1G31930.3); Has 3427 Blast hits to 3422 proteins in 394 species: Archae - 0; Bacteria - 2; Metazoa - 2220; Fungi - 618; Plants - 355; Viruses - 0; Other Eukaryotes - 232 (source: NCBI BLink). & (gnl|cdd|35305 : 267.0) no description available & (gnl|cdd|57932 : 250.0) no description available & (o04279|gpa2_pea : 167.0) Guanine nucleotide-binding protein alpha-2 subunit (GP-alpha-2) - Pisum sativum (Garden pea) & (reliability: 2038.0) & (original description: Putative XLG1, Description = Extra-large guanine nucleotide-binding protein 1, PFAM = PF00503)' T '30.5' 'signalling.G-proteins' 'niben101scf05709_72970-80072' '(q9xer8|rab7_goshi : 397.0) Ras-related protein Rab7 - Gossypium hirsutum (Upland cotton) & (at1g52280 : 390.0) RAB GTPase homolog G3D (RABG3d); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog G3C (TAIR:AT3G16100.1); Has 26220 Blast hits to 26194 proteins in 779 species: Archae - 32; Bacteria - 221; Metazoa - 13502; Fungi - 3923; Plants - 2848; Viruses - 20; Other Eukaryotes - 5674 (source: NCBI BLink). & (gnl|cdd|35615 : 343.0) no description available & (gnl|cdd|57948 : 329.0) no description available & (reliability: 780.0) & (original description: Putative RABG3D, Description = Ras-related protein RABG3d, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf05709_217375-223128' '(at1g79860 : 550.0) Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth Growth.; RHO guanyl-nucleotide exchange factor 12 (ROPGEF12); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 11 (TAIR:AT1G52240.1); Has 305 Blast hits to 303 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 305; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67377 : 469.0) no description available & (reliability: 1100.0) & (original description: Putative ROPGEF12, Description = Rop guanine nucleotide exchange factor 12, PFAM = PF03759)' T '30.5' 'signalling.G-proteins' 'niben101scf05811_298430-302519' '(q40193|rb11c_lotja : 365.0) Ras-related protein Rab11C - Lotus japonicus & (at1g07410 : 354.0) RAB GTPase homolog A2B (RABA2b); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: intracellular protein transport, signal transduction, nucleocytoplasmic transport, protein transport, small GTPase mediated signal transduction; LOCATED IN: endosome, plasma membrane, cell plate; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041), ADP-ribosylation factor (InterPro:IPR006688), Ras (InterPro:IPR013753), Ras small GTPase, Ras type (InterPro:IPR003577), Rab11-related (InterPro:IPR015595), Small GTPase, Rho type (InterPro:IPR003578), Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A2D (TAIR:AT5G59150.1); Has 28965 Blast hits to 28914 proteins in 772 species: Archae - 29; Bacteria - 152; Metazoa - 15139; Fungi - 4328; Plants - 3313; Viruses - 20; Other Eukaryotes - 5984 (source: NCBI BLink). & (gnl|cdd|35310 : 339.0) no description available & (gnl|cdd|57954 : 314.0) no description available & (reliability: 708.0) & (original description: Putative RAB11C, Description = Ras-related protein Rab11C, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf05849_11513-14178' '(at2g38360 : 219.0) prenylated RAB acceptor 1.B4 (PRA1.B4); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: prenylated RAB acceptor 1.B5 (TAIR:AT5G01640.1); Has 506 Blast hits to 506 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 53; Plants - 299; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|38352 : 201.0) no description available & (gnl|cdd|86276 : 171.0) no description available & (reliability: 396.0) & (original description: Putative PRA1B4, Description = PRA1 family protein B4, PFAM = PF03208)' T '30.5' 'signalling.G-proteins' 'niben101scf05880_196508-201608' '(at5g58590 : 216.0) Encodes a Ran-binding protein 1 homolog (RanBP1).; RAN binding protein 1 (RANBP1); FUNCTIONS IN: protein binding; INVOLVED IN: protein import into nucleus, translocation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein 1 (InterPro:IPR000156), Pleckstrin homology-type (InterPro:IPR011993); BEST Arabidopsis thaliana protein match is: Pleckstrin homology (PH) domain superfamily protein (TAIR:AT2G30060.1); Has 1560 Blast hits to 1231 proteins in 240 species: Archae - 0; Bacteria - 8; Metazoa - 836; Fungi - 365; Plants - 158; Viruses - 15; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|29845 : 133.0) no description available & (gnl|cdd|36082 : 90.2) no description available & (reliability: 432.0) & (original description: Putative RANG, Description = Ran-specific GTPase-activating protein, PFAM = PF00638)' T '30.5' 'signalling.G-proteins' 'niben101scf05912_173172-175702' '(at1g24290 : 81.6) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; EXPRESSED IN: shoot apex, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), ATPase, AAA-type, core (InterPro:IPR003959), MgsA AAA+ ATPase C-terminal (InterPro:IPR021886), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: replication factor C subunit 3 (TAIR:AT1G77470.1); Has 22422 Blast hits to 22383 proteins in 2992 species: Archae - 614; Bacteria - 15728; Metazoa - 553; Fungi - 700; Plants - 273; Viruses - 62; Other Eukaryotes - 4492 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative PGSC0003DMG400014180, Description = Putative ovule protein, PFAM = PF00627)' T '30.5' 'signalling.G-proteins' 'niben101scf06023_294563-300933' '(at3g12160 : 360.0) Encodes RABA4D, a member of the Arabidopsis RabA4 subfamily of Rab GTPase proteins. It is transported in exocytic vesicles to the apical tip of pollen tubes where it appears to promote tip growth. Proper localization of RabA4d depends on ROP1, RIC3, and RIC4 activity.; RAB GTPase homolog A4D (RABA4D); FUNCTIONS IN: GTP binding; INVOLVED IN: regulation of pollen tube growth, pollen tube growth, pollen tube development; LOCATED IN: exocytic vesicle, apical part of cell; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A4C (TAIR:AT5G47960.1); Has 28921 Blast hits to 28882 proteins in 778 species: Archae - 24; Bacteria - 155; Metazoa - 15072; Fungi - 4263; Plants - 3370; Viruses - 20; Other Eukaryotes - 6017 (source: NCBI BLink). & (p25766|rgp1_orysa : 331.0) Ras-related protein RGP1 (GTP-binding regulatory protein RGP1) - Oryza sativa (Rice) & (gnl|cdd|35310 : 319.0) no description available & (gnl|cdd|57954 : 308.0) no description available & (reliability: 720.0) & (original description: Putative RABA4D, Description = Ras-related protein RABA4d, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf06028_8245-19013' '(p93564|gpa1_soltu : 715.0) Guanine nucleotide-binding protein alpha-1 subunit (GP-alpha-1) - Solanum tuberosum (Potato) & (at2g26300 : 648.0) Encodes an alpha subunit of a heterotrimeric GTP-binding protein. The active GTP-bound form of GPA1 binds to the GTG1 and GTG2 abscisic acid (ABA) receptors and appears to affect their GTPase and GTP-binding activity, and hence, ABA binding abilities. GPA1 is a positive regulator in ABA-mediated inhibition of stomatal opening. Plants with recessive mutant alleles have complex phenotypes including: reduced brassinolide response, reduced cell divisions, round leaves, short hypocotyls. It is likely to be involved in the signaling events that trigger unfolded protein response-associated cell death. GPA1 is also involved in sugar signaling.; G protein alpha subunit 1 (GP ALPHA 1); FUNCTIONS IN: in 6 functions; INVOLVED IN: in 16 processes; LOCATED IN: plasma membrane, endoplasmic reticulum membrane, heterotrimeric G-protein complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plant G-protein, alpha subunit (InterPro:IPR002976), Guanine nucleotide binding protein (G-protein), alpha subunit (InterPro:IPR001019), G protein alpha subunit, helical insertion (InterPro:IPR011025); BEST Arabidopsis thaliana protein match is: extra-large GTP-binding protein 3 (TAIR:AT1G31930.3); Has 3745 Blast hits to 3647 proteins in 408 species: Archae - 0; Bacteria - 0; Metazoa - 2360; Fungi - 766; Plants - 268; Viruses - 0; Other Eukaryotes - 351 (source: NCBI BLink). & (gnl|cdd|84818 : 379.0) no description available & (gnl|cdd|35305 : 368.0) no description available & (reliability: 1296.0) & (original description: Putative GPA1, Description = Guanine nucleotide-binding protein alpha-1 subunit, PFAM = PF00503)' T '30.5' 'signalling.G-proteins' 'niben101scf06078_238635-244336' '(q05737|yptm2_maize : 378.0) GTP-binding protein YPTM2 - Zea mays (Maize) & (at1g02130 : 375.0) Belongs to the Rab1 GTPase subfamily. This small GTP-binding protein is required in ER to Golgi transportation.; RAS 5 (RA-5); FUNCTIONS IN: GTP binding; INVOLVED IN: response to cadmium ion, ER to Golgi vesicle-mediated transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 1A (TAIR:AT5G47200.1); Has 30420 Blast hits to 30350 proteins in 816 species: Archae - 27; Bacteria - 199; Metazoa - 15882; Fungi - 4318; Plants - 3658; Viruses - 20; Other Eukaryotes - 6316 (source: NCBI BLink). & (gnl|cdd|35307 : 336.0) no description available & (gnl|cdd|57955 : 327.0) no description available & (reliability: 750.0) & (original description: Putative RABD2C, Description = Ras-related protein RABD2c, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf06087_1339055-1351587' '(at5g64730 : 491.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35537 : 420.0) no description available & (gnl|cdd|29257 : 194.0) no description available & (reliability: 982.0) & (original description: Putative wdr83, Description = WD repeat domain-containing protein 83, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'niben101scf06100_171809-199497' '(at1g31930 : 860.0) Encodes XLG3 (extra-large G protein 3) that shows significant similarity to the G protein alpha subunit in its C terminal region. Involved in the regulation of root morphological and growth responses.; extra-large GTP-binding protein 3 (XLG3); FUNCTIONS IN: signal transducer activity, guanyl nucleotide binding; INVOLVED IN: in 11 processes; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Guanine nucleotide binding protein (G-protein), alpha subunit (InterPro:IPR001019), G protein alpha subunit, helical insertion (InterPro:IPR011025); BEST Arabidopsis thaliana protein match is: extra-large G-protein 1 (TAIR:AT2G23460.1). & (gnl|cdd|35305 : 272.0) no description available & (gnl|cdd|57932 : 263.0) no description available & (p93163|gpa2_soybn : 183.0) Guanine nucleotide-binding protein alpha-2 subunit (GP-alpha-2) - Glycine max (Soybean) & (reliability: 1720.0) & (original description: Putative GPA1, Description = GPA1 heterotrimeric G protein alpha subunit protein, PFAM = PF00503)' T '30.5' 'signalling.G-proteins' 'niben101scf06261_43661-50855' '(at3g49180 : 497.0) ROOT INITIATION DEFECTIVE 3 (RID3); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G11160.1); Has 42486 Blast hits to 21489 proteins in 714 species: Archae - 48; Bacteria - 7251; Metazoa - 15456; Fungi - 9258; Plants - 4698; Viruses - 0; Other Eukaryotes - 5775 (source: NCBI BLink). & (gnl|cdd|35865 : 316.0) no description available & (gnl|cdd|29257 : 116.0) no description available & (reliability: 994.0) & (original description: Putative RID3, Description = Protein ROOT INITIATION DEFECTIVE 3, PFAM = PF00400;PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'niben101scf06356_49439-91503' '(at2g30710 : 635.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT1G04830.2); Has 4509 Blast hits to 4436 proteins in 233 species: Archae - 0; Bacteria - 0; Metazoa - 2389; Fungi - 783; Plants - 598; Viruses - 0; Other Eukaryotes - 739 (source: NCBI BLink). & (gnl|cdd|36308 : 456.0) no description available & (gnl|cdd|47500 : 156.0) no description available & (reliability: 1270.0) & (original description: Putative 18615, Description = Predicted protein, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben101scf06525_85683-91303' '(at3g07410 : 305.0) RAB GTPase homolog A5B (RABA5b); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G43130.1); Has 27936 Blast hits to 27886 proteins in 749 species: Archae - 21; Bacteria - 143; Metazoa - 14734; Fungi - 3835; Plants - 3288; Viruses - 20; Other Eukaryotes - 5895 (source: NCBI BLink). & (gnl|cdd|35310 : 277.0) no description available & (gnl|cdd|57954 : 272.0) no description available & (q39572|yptc6_chlre : 221.0) Ras-related protein YPTC6 - Chlamydomonas reinhardtii & (reliability: 610.0) & (original description: Putative gmr2, Description = GTPase, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf06621_118371-121303' '(at1g24290 : 441.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; EXPRESSED IN: shoot apex, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), ATPase, AAA-type, core (InterPro:IPR003959), MgsA AAA+ ATPase C-terminal (InterPro:IPR021886), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: replication factor C subunit 3 (TAIR:AT1G77470.1); Has 22422 Blast hits to 22383 proteins in 2992 species: Archae - 614; Bacteria - 15728; Metazoa - 553; Fungi - 700; Plants - 273; Viruses - 62; Other Eukaryotes - 4492 (source: NCBI BLink). & (gnl|cdd|37239 : 400.0) no description available & (gnl|cdd|32437 : 324.0) no description available & (reliability: 882.0) & (original description: Putative WHIP, Description = Werner helicase interacting protein, PFAM = PF16193;PF12002)' T '30.5' 'signalling.G-proteins' 'niben101scf06641_192864-197790' '(gnl|cdd|35615 : 291.0) no description available & (q43463|rab7_soybn : 284.0) Ras-related protein Rab7 - Glycine max (Soybean) & (gnl|cdd|57948 : 277.0) no description available & (at4g09720 : 269.0) RAB GTPase homolog G3A (RABG3A); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: intracellular protein transport, signal transduction, nucleocytoplasmic transport, protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041), Ras (InterPro:IPR013753), Ras small GTPase, Ras type (InterPro:IPR003577), Small GTPase, Rho type (InterPro:IPR003578), Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog G3B (TAIR:AT1G22740.1). & (reliability: 538.0) & (original description: Putative rab7, Description = Ras-related protein Rab7, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf06726_6116-12804' '(p93397|gbb1_tobac : 730.0) Guanine nucleotide-binding protein subunit beta 1 - Nicotiana tabacum (Common tobacco) & (at4g34460 : 595.0) Encodes the heterotrimeric G-protein beta subunit and is involved in organ shape. A significant fraction of the protein is found in the ER. Mutants carrying null alleles express similar fruit phenotypes, as seen in er plants, but differ from er in that the stem is only slightly shorter than that in the wild type, the pedicel is slightly longer than that in the wild type, and the leaves are rounder than those in er mutants. Gene is expressed in all tissues examined, with highest expression level found in siliques. It is involved in resistance to Plectosphaerella cucumerina. The predicted protein has two DWD motifs. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase; GTP binding protein beta 1 (AGB1); FUNCTIONS IN: protein binding, GTPase activity, nucleotide binding; INVOLVED IN: in 11 processes; LOCATED IN: endoplasmic reticulum, plasma membrane, CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), Guanine nucleotide-binding protein, beta subunit (InterPro:IPR016346), WD40 repeat (InterPro:IPR001680), G-protein, beta subunit (InterPro:IPR001632), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein (TAIR:AT5G67320.1); Has 59918 Blast hits to 28704 proteins in 832 species: Archae - 54; Bacteria - 8355; Metazoa - 23550; Fungi - 12390; Plants - 7677; Viruses - 0; Other Eukaryotes - 7892 (source: NCBI BLink). & (gnl|cdd|35507 : 438.0) no description available & (gnl|cdd|29257 : 215.0) no description available & (reliability: 1190.0) & (original description: Putative gb1, Description = Guanine nucleotide-binding protein subunit beta, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'niben101scf06726_101694-109688' '(at3g18820 : 400.0) RAB GTPase homolog G3F (RAB7B); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog G3E (TAIR:AT1G49300.2); Has 26432 Blast hits to 26399 proteins in 759 species: Archae - 38; Bacteria - 171; Metazoa - 13566; Fungi - 4011; Plants - 2887; Viruses - 20; Other Eukaryotes - 5739 (source: NCBI BLink). & (p31022|rab7_pea : 400.0) Ras-related protein Rab7 - Pisum sativum (Garden pea) & (gnl|cdd|35615 : 346.0) no description available & (gnl|cdd|57948 : 333.0) no description available & (reliability: 800.0) & (original description: Putative RABG3E, Description = Ras-related protein RABG3e, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf06738_64152-72520' '(at2g41670 : 548.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G10650.1); Has 3980 Blast hits to 3980 proteins in 1445 species: Archae - 109; Bacteria - 2376; Metazoa - 398; Fungi - 429; Plants - 195; Viruses - 0; Other Eukaryotes - 473 (source: NCBI BLink). & (gnl|cdd|37696 : 274.0) no description available & (gnl|cdd|83086 : 186.0) no description available & (reliability: 1096.0) & (original description: Putative SIN2, Description = Short integuments 2, mitochondrial, PFAM = PF01926)' T '30.5' 'signalling.G-proteins' 'niben101scf06782_87425-101799' '(at3g12080 : 808.0) embryo defective 2738 (emb2738); FUNCTIONS IN: GTP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), GTP-binding, EngA (InterPro:IPR016484), GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: GTP binding;GTP binding (TAIR:AT5G39960.1); Has 46500 Blast hits to 25681 proteins in 2968 species: Archae - 249; Bacteria - 36237; Metazoa - 387; Fungi - 432; Plants - 421; Viruses - 0; Other Eukaryotes - 8774 (source: NCBI BLink). & (gnl|cdd|80507 : 514.0) no description available & (gnl|cdd|36405 : 380.0) no description available & (reliability: 1616.0) & (original description: Putative der, Description = GTPase Der, PFAM = PF01926;PF01926;PF14714)' T '30.5' 'signalling.G-proteins' 'niben101scf06789_452156-455793' '(at5g19320 : 577.0) Encodes RAN GTPase activating protein 2. The protein is localized to the nuclear envelope during interphase.; RAN GTPase activating protein 2 (RANGAP2); FUNCTIONS IN: RAN GTPase activator activity; INVOLVED IN: response to salt stress, nucleocytoplasmic transport; LOCATED IN: nuclear envelope, endoplasmic reticulum, plasma membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RAN GTPase activating protein 1 (TAIR:AT3G63130.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37120 : 334.0) no description available & (gnl|cdd|29015 : 113.0) no description available & (reliability: 1154.0) & (original description: Putative RANGAP2, Description = RAN GTPase-activating protein 2, PFAM = PF13516;PF13516;PF13516;PF13943)' T '30.5' 'signalling.G-proteins' 'niben101scf07008_146564-152485' '(q9xer8|rab7_goshi : 397.0) Ras-related protein Rab7 - Gossypium hirsutum (Upland cotton) & (at1g52280 : 389.0) RAB GTPase homolog G3D (RABG3d); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog G3C (TAIR:AT3G16100.1); Has 26220 Blast hits to 26194 proteins in 779 species: Archae - 32; Bacteria - 221; Metazoa - 13502; Fungi - 3923; Plants - 2848; Viruses - 20; Other Eukaryotes - 5674 (source: NCBI BLink). & (gnl|cdd|35615 : 339.0) no description available & (gnl|cdd|57948 : 325.0) no description available & (reliability: 778.0) & (original description: Putative RABG3D, Description = Ras-related protein RABG3d, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf07031_165-5249' '(at5g02010 : 636.0) Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.; RHO guanyl-nucleotide exchange factor 7 (ROPGEF7); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: ROP guanine nucleotide exchange factor 5 (TAIR:AT5G05940.1); Has 310 Blast hits to 307 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 308; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|67377 : 537.0) no description available & (reliability: 1272.0) & (original description: Putative ROPGEF7, Description = Rop guanine nucleotide exchange factor 7, PFAM = PF03759)' T '30.5' 'signalling.G-proteins' 'niben101scf07109_477973-481917' '(o04369|rac1_lotja : 197.0) Rac-like GTP-binding protein RAC1 - Lotus japonicus & (at1g75840 : 196.0) Belongs to the plant-specific ROP group of Rho GTPases; localized to the plasma membrane of tips of root hairs; involved in polar growth control.; RAC-like GTP binding protein 5 (ARAC5); CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RHO-related protein from plants 2 (TAIR:AT1G20090.1); Has 24632 Blast hits to 24606 proteins in 682 species: Archae - 9; Bacteria - 69; Metazoa - 12688; Fungi - 3833; Plants - 2700; Viruses - 20; Other Eukaryotes - 5313 (source: NCBI BLink). & (gnl|cdd|58016 : 186.0) no description available & (gnl|cdd|35614 : 165.0) no description available & (reliability: 392.0) & (original description: Putative rac1, Description = Rac-like GTP-binding protein 3, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf07189_17984-21728' '(at1g24130 : 365.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, heterotrimeric G-protein complex; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G50120.1); Has 45824 Blast hits to 22056 proteins in 757 species: Archae - 54; Bacteria - 6419; Metazoa - 16905; Fungi - 10404; Plants - 5900; Viruses - 0; Other Eukaryotes - 6142 (source: NCBI BLink). & (gnl|cdd|29257 : 145.0) no description available & (gnl|cdd|35540 : 98.5) no description available & (reliability: 666.0) & (original description: Putative BnaA09g29760D, Description = BnaA09g29760D protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'niben101scf07194_43851-49108' '(at5g54840 : 322.0) Monomeric G protein. Expressed in the root quiescent center, flowers, and leaf guard cells and hydathodes.; SGP1; FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTPase (InterPro:IPR020851), Mitochondrial Rho-like (InterPro:IPR013684), GTPase, Tem1 (InterPro:IPR017231); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT3G21700.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36886 : 311.0) no description available & (gnl|cdd|58011 : 291.0) no description available & (reliability: 644.0) & (original description: Putative sgp1, Description = Monomeric G protein SGP1, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf07253_240284-255497' '(p31583|rhn1_nicpl : 309.0) Ras-related protein RHN1 - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g45130 : 258.0) small GTP binding protein; RAB homolog 1 (RHA1); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab5-related (InterPro:IPR015599); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT4G19640.1); Has 26267 Blast hits to 26237 proteins in 716 species: Archae - 26; Bacteria - 136; Metazoa - 13722; Fungi - 3681; Plants - 2979; Viruses - 20; Other Eukaryotes - 5703 (source: NCBI BLink). & (gnl|cdd|57946 : 230.0) no description available & (gnl|cdd|35315 : 228.0) no description available & (reliability: 516.0) & (original description: Putative RAB5B, Description = Ras-related protein Rab-5B isoform 2, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf07372_61016-72414' '(at4g21520 : 532.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G08390.1); Has 9857 Blast hits to 6114 proteins in 421 species: Archae - 34; Bacteria - 3288; Metazoa - 2459; Fungi - 1903; Plants - 847; Viruses - 0; Other Eukaryotes - 1326 (source: NCBI BLink). & (gnl|cdd|38130 : 401.0) no description available & (gnl|cdd|29257 : 98.5) no description available & (reliability: 1064.0) & (original description: Putative Gnb5, Description = Telomerase Cajal body protein 1, PFAM = PF00400)' T '30.5' 'signalling.G-proteins' 'niben101scf07497_174735-193955' '(at4g07410 : 957.0) Transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT1G27470.1); Has 10654 Blast hits to 6476 proteins in 452 species: Archae - 14; Bacteria - 3757; Metazoa - 2166; Fungi - 2748; Plants - 788; Viruses - 0; Other Eukaryotes - 1181 (source: NCBI BLink). & (gnl|cdd|37259 : 497.0) no description available & (gnl|cdd|29257 : 94.3) no description available & (reliability: 1914.0) & (original description: Putative At1g27470, Description = Putative uncharacterized protein At1g27470, PFAM = PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'niben101scf07499_22972-47796' '(at2g44610 : 358.0) Encodes a GTP-binding protein with similarity to yeast YPT6 . RAB6 can complement the yeast YTP mutant.; RAB6A; FUNCTIONS IN: protein binding, GTP binding; INVOLVED IN: secretion by cell; LOCATED IN: plasma membrane, membrane fraction; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab6-related (InterPro:IPR015600); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog H1E (TAIR:AT5G10260.1); Has 26612 Blast hits to 26583 proteins in 727 species: Archae - 21; Bacteria - 159; Metazoa - 14143; Fungi - 3598; Plants - 2938; Viruses - 20; Other Eukaryotes - 5733 (source: NCBI BLink). & (gnl|cdd|35317 : 328.0) no description available & (gnl|cdd|57947 : 297.0) no description available & (p31583|rhn1_nicpl : 146.0) Ras-related protein RHN1 - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 716.0) & (original description: Putative RABH1B, Description = Ras-related protein RABH1b, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf07503_10293-32390' '(at5g13300 : 756.0) Belongs to 15-member small GTPase gene family, ARF-GAP domain proteins (AGD); corresponds to AGD3, and is one of four proteins belonging to class 1, together with AGD1, AGD2 and AGD4. The protein contains four domains: BAR domain, PH domain, an ARF-GAP domain, and two Ankyrin repeats. In sfc mutants, the secondary and tertiary veins of cotyledons, leaves, sepals and petals are largely replaced by small segments of discontinuous veins. sfc mutants have exaggerated responses to auxin.; SCARFACE (SFC); FUNCTIONS IN: ARF GTPase activator activity, phosphoinositide binding; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, phloem or xylem histogenesis, leaf morphogenesis; LOCATED IN: cytosol, trans-Golgi network transport vesicle, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), Pleckstrin homology-type (InterPro:IPR011993), Ankyrin repeat-containing domain (InterPro:IPR020683), BAR (InterPro:IPR004148), Pleckstrin homology (InterPro:IPR001849), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 1 (TAIR:AT5G61980.1); Has 64753 Blast hits to 27558 proteins in 1221 species: Archae - 110; Bacteria - 5131; Metazoa - 34265; Fungi - 4887; Plants - 2591; Viruses - 654; Other Eukaryotes - 17115 (source: NCBI BLink). & (gnl|cdd|35741 : 423.0) no description available & (gnl|cdd|85433 : 142.0) no description available & (reliability: 1512.0) & (original description: Putative AGD3, Description = ADP-ribosylation factor GTPase-activating protein AGD3, PFAM = PF16746;PF01412;PF00169;PF12796)' T '30.5' 'signalling.G-proteins' 'niben101scf07579_12925-19966' '(at5g13300 : 188.0) Belongs to 15-member small GTPase gene family, ARF-GAP domain proteins (AGD); corresponds to AGD3, and is one of four proteins belonging to class 1, together with AGD1, AGD2 and AGD4. The protein contains four domains: BAR domain, PH domain, an ARF-GAP domain, and two Ankyrin repeats. In sfc mutants, the secondary and tertiary veins of cotyledons, leaves, sepals and petals are largely replaced by small segments of discontinuous veins. sfc mutants have exaggerated responses to auxin.; SCARFACE (SFC); FUNCTIONS IN: ARF GTPase activator activity, phosphoinositide binding; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, phloem or xylem histogenesis, leaf morphogenesis; LOCATED IN: cytosol, trans-Golgi network transport vesicle, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), Pleckstrin homology-type (InterPro:IPR011993), Ankyrin repeat-containing domain (InterPro:IPR020683), BAR (InterPro:IPR004148), Pleckstrin homology (InterPro:IPR001849), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 1 (TAIR:AT5G61980.1); Has 64753 Blast hits to 27558 proteins in 1221 species: Archae - 110; Bacteria - 5131; Metazoa - 34265; Fungi - 4887; Plants - 2591; Viruses - 654; Other Eukaryotes - 17115 (source: NCBI BLink). & (gnl|cdd|35741 : 80.8) no description available & (reliability: 376.0) & (original description: Putative dsc1, Description = ADP-ribosylation factor GTPase-activating protein AGD3, PFAM = PF16746)' T '30.5' 'signalling.G-proteins' 'niben101scf07765_147132-176259' '(at1g31650 : 487.0) Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.; RHO guanyl-nucleotide exchange factor 14 (ROPGEF14); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 7 (TAIR:AT5G02010.1); Has 302 Blast hits to 301 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 302; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67377 : 461.0) no description available & (reliability: 974.0) & (original description: Putative KPP, Description = Rop guanine nucleotide exchange factor 1, PFAM = PF03759)' T '30.5' 'signalling.G-proteins' 'niben101scf07790_11035-15666' '(at4g04900 : 84.7) encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Most similar to RIC9 and RIC11 (subfamily group I). Gene is expressed predominantly in roots, leaves, and seedlings.; ROP-interactive CRIB motif-containing protein 10 (RIC10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen tube growth; LOCATED IN: cytoplasm; EXPRESSED IN: seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095); BEST Arabidopsis thaliana protein match is: PAK-box/P21-Rho-binding family protein (TAIR:AT4G21745.1); Has 685 Blast hits to 255 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 53; Fungi - 27; Plants - 173; Viruses - 0; Other Eukaryotes - 432 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative RIC5, Description = CRIB domain-containing protein RIC10, PFAM = PF00786)' T '30.5' 'signalling.G-proteins' 'niben101scf07842_123169-130268' '(at3g49350 : 583.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT5G24390.1); Has 4289 Blast hits to 3657 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 2316; Fungi - 775; Plants - 693; Viruses - 0; Other Eukaryotes - 505 (source: NCBI BLink). & (gnl|cdd|37408 : 352.0) no description available & (gnl|cdd|47500 : 122.0) no description available & (reliability: 1166.0) & (original description: Putative At3g49350, Description = At3g49350, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben101scf08033_103712-108570' '(at1g06060 : 246.0) LisH and RanBPM domains containing protein; CONTAINS InterPro DOMAIN/s: Ran binding protein, CRA domain (InterPro:IPR019589), CTLH, C-terminal LisH motif (InterPro:IPR006595), LisH dimerisation motif (InterPro:IPR006594), Ran binding protein-like, CRA domain (InterPro:IPR013144); BEST Arabidopsis thaliana protein match is: SPla/RYanodine receptor (SPRY) domain-containing protein (TAIR:AT1G35470.2); Has 872 Blast hits to 770 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 465; Fungi - 136; Plants - 208; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|37870 : 150.0) no description available & (reliability: 492.0) & (original description: Putative glysoja_009251, Description = UPF0559 protein, PFAM = PF10607)' T '30.5' 'signalling.G-proteins' 'niben101scf08033_103888-108496' '(at1g06060 : 153.0) LisH and RanBPM domains containing protein; CONTAINS InterPro DOMAIN/s: Ran binding protein, CRA domain (InterPro:IPR019589), CTLH, C-terminal LisH motif (InterPro:IPR006595), LisH dimerisation motif (InterPro:IPR006594), Ran binding protein-like, CRA domain (InterPro:IPR013144); BEST Arabidopsis thaliana protein match is: SPla/RYanodine receptor (SPRY) domain-containing protein (TAIR:AT1G35470.2); Has 872 Blast hits to 770 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 465; Fungi - 136; Plants - 208; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative glysoja_009251, Description = UPF0559 protein, PFAM = PF10607)' T '30.5' 'signalling.G-proteins' 'niben101scf08033_118581-129129' '(gnl|cdd|84060 : 296.0) no description available & (gnl|cdd|36702 : 224.0) no description available & (at5g18570 : 141.0) Encodes AtObgC, a plant ortholog of bacterial Obg. AtObgC is a chloroplast-targeting GTPase essential for early embryogenesis. Mutations in this locus result in embryo lethality. The protein is dually localized in the stroma and the inner envelope membrane and is involved in thylakoid membrane biogenesis.; EMBRYO DEFECTIVE 269 (EMB269); FUNCTIONS IN: GTPase activity; INVOLVED IN: response to light stimulus, thylakoid membrane organization, embryo development, embryo development ending in seed dormancy; LOCATED IN: chloroplast, chloroplast stroma, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG subdomain (InterPro:IPR006169), GTP-binding protein GTP1/OBG, C-terminal (InterPro:IPR015349), GTP1/OBG (InterPro:IPR006073), GTP1/OBG, conserved site (InterPro:IPR006074), GTP-binding protein, HSR1-related (InterPro:IPR002917), GTP-binding protein Obg/CgtA (InterPro:IPR014100); BEST Arabidopsis thaliana protein match is: GTP-binding protein Obg/CgtA (TAIR:AT1G07615.1); Has 23458 Blast hits to 23162 proteins in 3000 species: Archae - 644; Bacteria - 14053; Metazoa - 1121; Fungi - 826; Plants - 464; Viruses - 52; Other Eukaryotes - 6298 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative cgtA, Description = GTPase Obg, PFAM = PF01018;PF01926)' T '30.5' 'signalling.G-proteins' 'niben101scf08039_15414-29415' '(at3g07890 : 672.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G37290.1); Has 5103 Blast hits to 5093 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 2600; Fungi - 1061; Plants - 534; Viruses - 0; Other Eukaryotes - 908 (source: NCBI BLink). & (gnl|cdd|37269 : 293.0) no description available & (gnl|cdd|47500 : 192.0) no description available & (reliability: 1344.0) & (original description: Putative TBC1D2, Description = TBC1 domain family member 2A, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben101scf08121_222752-226080' '(at1g52380 : 223.0) NUP50 (Nucleoporin 50 kDa) protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular transport; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein 1 (InterPro:IPR000156), Pleckstrin homology-type (InterPro:IPR011993), Nuclear pore complex, NUP2/50/61 (InterPro:IPR015007); BEST Arabidopsis thaliana protein match is: NUP50 (Nucleoporin 50 kDa) protein (TAIR:AT3G15970.1); Has 1614 Blast hits to 1303 proteins in 238 species: Archae - 0; Bacteria - 48; Metazoa - 835; Fungi - 410; Plants - 179; Viruses - 3; Other Eukaryotes - 139 (source: NCBI BLink). & (gnl|cdd|29845 : 103.0) no description available & (reliability: 446.0) & (original description: Putative NbNup50c, Description = Nuclear pore complex protein Nup50c, PFAM = PF08911;PF00638)' T '30.5' 'signalling.G-proteins' 'niben101scf08151_23746-30444' '(at3g24620 : 566.0) Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.; RHO guanyl-nucleotide exchange factor 8 (ROPGEF8); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 9 (TAIR:AT4G13240.1); Has 311 Blast hits to 307 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 309; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|67377 : 496.0) no description available & (reliability: 1132.0) & (original description: Putative ROPGEF8, Description = Rho guanine nucleotide exchange factor 8, PFAM = PF03759)' T '30.5' 'signalling.G-proteins' 'niben101scf08179_363827-368789' '(at1g02130 : 377.0) Belongs to the Rab1 GTPase subfamily. This small GTP-binding protein is required in ER to Golgi transportation.; RAS 5 (RA-5); FUNCTIONS IN: GTP binding; INVOLVED IN: response to cadmium ion, ER to Golgi vesicle-mediated transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 1A (TAIR:AT5G47200.1); Has 30420 Blast hits to 30350 proteins in 816 species: Archae - 27; Bacteria - 199; Metazoa - 15882; Fungi - 4318; Plants - 3658; Viruses - 20; Other Eukaryotes - 6316 (source: NCBI BLink). & (p40392|ric1_orysa : 365.0) Ras-related protein RIC1 - Oryza sativa (Rice) & (gnl|cdd|35307 : 334.0) no description available & (gnl|cdd|57955 : 324.0) no description available & (reliability: 754.0) & (original description: Putative RABD2A, Description = Ras-related protein RABD2a, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf08195_234372-239416' '(at4g13730 : 369.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT1G04830.1). & (gnl|cdd|39767 : 328.0) no description available & (gnl|cdd|47500 : 131.0) no description available & (reliability: 738.0) & (original description: Putative Sb03g043240, Description = Putative uncharacterized protein Sb03g043240, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben101scf08242_62308-67782' '(gnl|cdd|58016 : 318.0) no description available & (at5g45970 : 312.0) Encodes a Rac-like protein ARAC2. A member of ROP GTPase gene family.; RAC-like 2 (RAC2); FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RAC-like 3 (TAIR:AT4G35020.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q41254|rac9_goshi : 310.0) Rac-like GTP-binding protein RAC9 - Gossypium hirsutum (Upland cotton) & (gnl|cdd|35614 : 296.0) no description available & (reliability: 624.0) & (original description: Putative RAC7, Description = Rac-like GTP-binding protein 7, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf08293_186629-195287' '(at1g02130 : 374.0) Belongs to the Rab1 GTPase subfamily. This small GTP-binding protein is required in ER to Golgi transportation.; RAS 5 (RA-5); FUNCTIONS IN: GTP binding; INVOLVED IN: response to cadmium ion, ER to Golgi vesicle-mediated transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 1A (TAIR:AT5G47200.1); Has 30420 Blast hits to 30350 proteins in 816 species: Archae - 27; Bacteria - 199; Metazoa - 15882; Fungi - 4318; Plants - 3658; Viruses - 20; Other Eukaryotes - 6316 (source: NCBI BLink). & (p40392|ric1_orysa : 365.0) Ras-related protein RIC1 - Oryza sativa (Rice) & (gnl|cdd|35307 : 329.0) no description available & (gnl|cdd|57955 : 322.0) no description available & (reliability: 748.0) & (original description: Putative YPTM1, Description = GTP-binding protein YPTM1, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf08341_181800-186442' '(at5g55190 : 414.0) A member of RAN GTPase gene family. Encodes a small soluble GTP-binding protein. Likely to be involved in nuclear translocation of proteins. May also be involved in cell cycle progression.; RAN GTPase 3 (RAN3); FUNCTIONS IN: protein binding, GTP binding, GTPase activity; INVOLVED IN: protein import into nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753); BEST Arabidopsis thaliana protein match is: RAS-related nuclear protein-1 (TAIR:AT5G20010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p41919|ranb1_tobac : 414.0) GTP-binding nuclear protein Ran-B1 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35319 : 355.0) no description available & (gnl|cdd|57936 : 345.0) no description available & (reliability: 828.0) & (original description: Putative gsp1, Description = GTP-binding nuclear protein, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf08341_599563-611090' '(at4g13350 : 271.0) Encodes a GTPase that interacts with nuclear shuttle proteins (NSPs) from a number of different plant viruses. The gene is widely expressed and NIG transcript levels do not rise in response to viral infection. This cytoplasmic protein does not directly interact with a viral movement protein (MP), but, it does promote the movement of NSP from the nucleus to the cytoplasm. Overexpression of NIG in Arabidopsis plants renders them more sensitive to geminivirus infection.; NSP (nuclear shuttle protein)-interacting GTPase (NIG); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: nucleocytoplasmic transport, response to virus; LOCATED IN: cytosol, cytoplasm; EXPRESSED IN: flower, root, cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ArfGap/RecO-like zinc finger domain-containing protein (TAIR:AT4G32630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35921 : 153.0) no description available & (gnl|cdd|85433 : 89.2) no description available & (reliability: 542.0) & (original description: Putative BnaCnng14610D, Description = BnaCnng14610D protein, PFAM = PF01412)' T '30.5' 'signalling.G-proteins' 'niben101scf08478_362724-375300' '(at4g13730 : 573.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT1G04830.1). & (gnl|cdd|39767 : 425.0) no description available & (gnl|cdd|47500 : 131.0) no description available & (reliability: 1146.0) & (original description: Putative At1g04830, Description = RabGAP/TBC domain-containing protein, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben101scf08513_40075-55961' '(at1g31650 : 629.0) Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.; RHO guanyl-nucleotide exchange factor 14 (ROPGEF14); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 7 (TAIR:AT5G02010.1); Has 302 Blast hits to 301 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 302; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67377 : 511.0) no description available & (reliability: 1258.0) & (original description: Putative ROPGEF14, Description = Rop guanine nucleotide exchange factor 14, PFAM = PF03759)' T '30.5' 'signalling.G-proteins' 'niben101scf08586_264167-284106' '(at1g18070 : 738.0) Translation elongation factor EF1A/initiation factor IF2gamma family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT5G60390.3). & (gnl|cdd|35680 : 633.0) no description available & (gnl|cdd|34853 : 449.0) no description available & (p29521|ef1a1_dauca : 277.0) Elongation factor 1-alpha (EF-1-alpha) - Daucus carota (Carrot) & (reliability: 1476.0) & (original description: Putative gspt1, Description = Eukaryotic peptide chain release factor GTP-binding subunit ERF3B, PFAM = PF03144;PF03143;PF00009)' T '30.5' 'signalling.G-proteins' 'niben101scf08653_59985-73665' '(at1g18070 : 741.0) Translation elongation factor EF1A/initiation factor IF2gamma family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT5G60390.3). & (gnl|cdd|35680 : 627.0) no description available & (gnl|cdd|34853 : 447.0) no description available & (p29521|ef1a1_dauca : 277.0) Elongation factor 1-alpha (EF-1-alpha) - Daucus carota (Carrot) & (reliability: 1482.0) & (original description: Putative ELF, Description = Ef1alpha-like factor, PFAM = PF00009;PF03143;PF03144)' T '30.5' 'signalling.G-proteins' 'niben101scf08675_80003-85531' '(at1g48570 : 333.0) zinc finger (Ran-binding) family protein; FUNCTIONS IN: binding, zinc ion binding; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.2); Has 1648 Blast hits to 939 proteins in 174 species: Archae - 0; Bacteria - 8; Metazoa - 430; Fungi - 191; Plants - 717; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). & (gnl|cdd|39399 : 132.0) no description available & (reliability: 666.0) & (original description: Putative At1g48570, Description = Putative uncharacterized protein At1g48570, PFAM = PF00641;PF00641)' T '30.5' 'signalling.G-proteins' 'niben101scf08690_174855-189561' '(at5g42080 : 1033.0) Encodes a dynamin-like protein related to phragmoplastin. Mutations in this gene, in combination with mutation in ADL1E, result in defects in embryogenesis, cell plate formation and trichome branching. Also controls vascular patterning in combination with VAN3 and GNOM. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis.; dynamin-like protein (DL1); CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1B (TAIR:AT3G61760.1). & (gnl|cdd|35667 : 576.0) no description available & (gnl|cdd|64873 : 268.0) no description available & (reliability: 2066.0) & (original description: Putative dnm1, Description = Dynamin, PFAM = PF02212;PF01031;PF00350)' T '30.5' 'signalling.G-proteins' 'niben101scf09004_294845-336561' '(at5g19390 : 882.0) Encodes a protein with similarity to REN1, a Rho GTPase activating protein.; Rho GTPase activation protein (RhoGAP) with PH domain; FUNCTIONS IN: Rho GTPase activator activity, phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Rho GTPase activation protein (InterPro:IPR008936), Pleckstrin homology (InterPro:IPR001849), RhoGAP (InterPro:IPR000198); BEST Arabidopsis thaliana protein match is: Rho GTPase activation protein (RhoGAP) with PH domain (TAIR:AT5G12150.2); Has 4185 Blast hits to 4168 proteins in 202 species: Archae - 0; Bacteria - 9; Metazoa - 3193; Fungi - 416; Plants - 210; Viruses - 0; Other Eukaryotes - 357 (source: NCBI BLink). & (gnl|cdd|39472 : 475.0) no description available & (gnl|cdd|84905 : 126.0) no description available & (reliability: 1608.0) & (original description: Putative ROPGAP7, Description = Rho GTPase-activating protein 7, PFAM = PF00620;PF00169;PF14389)' T '30.5' 'signalling.G-proteins' 'niben101scf09116_299293-303207' '(at4g28550 : 192.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: sperm cell, root, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G20440.2); Has 4375 Blast hits to 4233 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 2348; Fungi - 794; Plants - 640; Viruses - 0; Other Eukaryotes - 593 (source: NCBI BLink). & (gnl|cdd|37408 : 134.0) no description available & (gnl|cdd|47500 : 86.9) no description available & (reliability: 384.0) & (original description: Putative At2g20440, Description = RabGAP/TBC domain-containing family protein, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben101scf09203_100847-105177' '(at3g62560 : 333.0) Ras-related small GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: secretion-associated RAS super family 2 (TAIR:AT4G02080.1); Has 6828 Blast hits to 6826 proteins in 379 species: Archae - 2; Bacteria - 48; Metazoa - 3250; Fungi - 1258; Plants - 1101; Viruses - 0; Other Eukaryotes - 1169 (source: NCBI BLink). & (gnl|cdd|35300 : 330.0) no description available & (o04266|sar1a_bracm : 329.0) GTP-binding protein SAR1A - Brassica campestris (Field mustard) & (gnl|cdd|57938 : 326.0) no description available & (reliability: 666.0) & (original description: Putative SAR2, Description = GTP-binding protein SAR2, PFAM = PF00025)' T '30.5' 'signalling.G-proteins' 'niben101scf09211_11570-18242' '(at1g48270 : 458.0) encodes a protein similar to G-coupled receptor with 7 transmembrane regions. Overexpression studies suggest this gene is involved in dormancy and flowering. Reduction of expression results in decreased sensitivity to cytokinin.; G-protein-coupled receptor 1 (GCR1); FUNCTIONS IN: G-protein coupled receptor activity; INVOLVED IN: in 7 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: G-protein-coupled receptor, GCR1 putative (InterPro:IPR022340), GPCR, family 2-like (InterPro:IPR017981), GCR1-cAMP receptor (InterPro:IPR022343); Has 592 Blast hits to 590 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 324; Fungi - 88; Plants - 42; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (reliability: 916.0) & (original description: Putative GCR1, Description = G-protein coupled receptor 1, PFAM = PF05462)' T '30.5' 'signalling.G-proteins' 'niben101scf09596_11406-26475' '(at5g03520 : 315.0) RAB GTPase homolog 8C (RAB8C); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog E1E (TAIR:AT3G09900.1); Has 25713 Blast hits to 25688 proteins in 729 species: Archae - 2; Bacteria - 99; Metazoa - 13473; Fungi - 3651; Plants - 2845; Viruses - 20; Other Eukaryotes - 5623 (source: NCBI BLink). & (gnl|cdd|35301 : 315.0) no description available & (gnl|cdd|57953 : 309.0) no description available & (q39433|rb1bv_betvu : 301.0) Ras-related protein RAB1BV - Beta vulgaris (Sugar beet) & (reliability: 630.0) & (original description: Putative RABE1C, Description = Ras-related protein RABE1c, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf09792_90250-103644' '(at4g28550 : 531.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: sperm cell, root, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G20440.2); Has 4375 Blast hits to 4233 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 2348; Fungi - 794; Plants - 640; Viruses - 0; Other Eukaryotes - 593 (source: NCBI BLink). & (gnl|cdd|37408 : 308.0) no description available & (gnl|cdd|47500 : 124.0) no description available & (reliability: 1062.0) & (original description: Putative At4g28550, Description = At4g28550, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben101scf09819_99880-104361' '(gnl|cdd|35504 : 446.0) no description available & (at5g53500 : 364.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G24320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29257 : 114.0) no description available & (reliability: 726.0) & (original description: Putative BnaC06g02280D, Description = BnaC06g02280D protein, PFAM = PF00400;PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'niben101scf09878_55071-64235' '(at5g57960 : 693.0) GTP-binding protein, HflX; FUNCTIONS IN: GTP binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HflX (InterPro:IPR016496), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: GTP-binding protein, HflX (TAIR:AT3G49725.1); Has 31952 Blast hits to 30531 proteins in 2948 species: Archae - 298; Bacteria - 25096; Metazoa - 510; Fungi - 190; Plants - 240; Viruses - 0; Other Eukaryotes - 5618 (source: NCBI BLink). & (gnl|cdd|35631 : 456.0) no description available & (gnl|cdd|32443 : 428.0) no description available & (reliability: 1386.0) & (original description: Putative hflX, Description = GTPase HflX, PFAM = PF01926;PF16360;PF13167)' T '30.5' 'signalling.G-proteins' 'niben101scf09951_70084-80356' '(at2g46710 : 430.0) Rho GTPase activating protein with PAK-box/P21-Rho-binding domain; FUNCTIONS IN: Rac GTPase activator activity; INVOLVED IN: signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095), Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198); BEST Arabidopsis thaliana protein match is: Rho GTPase activating protein with PAK-box/P21-Rho-binding domain (TAIR:AT4G03100.1); Has 3093 Blast hits to 3092 proteins in 169 species: Archae - 0; Bacteria - 0; Metazoa - 2259; Fungi - 327; Plants - 185; Viruses - 0; Other Eukaryotes - 322 (source: NCBI BLink). & (gnl|cdd|39471 : 294.0) no description available & (gnl|cdd|63840 : 112.0) no description available & (reliability: 860.0) & (original description: Putative ROPGAP3, Description = Rho GTPase-activating protein 3, PFAM = PF00620)' T '30.5' 'signalling.G-proteins' 'niben101scf09987_253907-257436' '(at1g07410 : 357.0) RAB GTPase homolog A2B (RABA2b); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: intracellular protein transport, signal transduction, nucleocytoplasmic transport, protein transport, small GTPase mediated signal transduction; LOCATED IN: endosome, plasma membrane, cell plate; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041), ADP-ribosylation factor (InterPro:IPR006688), Ras (InterPro:IPR013753), Ras small GTPase, Ras type (InterPro:IPR003577), Rab11-related (InterPro:IPR015595), Small GTPase, Rho type (InterPro:IPR003578), Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A2D (TAIR:AT5G59150.1); Has 28965 Blast hits to 28914 proteins in 772 species: Archae - 29; Bacteria - 152; Metazoa - 15139; Fungi - 4328; Plants - 3313; Viruses - 20; Other Eukaryotes - 5984 (source: NCBI BLink). & (q40193|rb11c_lotja : 357.0) Ras-related protein Rab11C - Lotus japonicus & (gnl|cdd|35310 : 334.0) no description available & (gnl|cdd|57954 : 317.0) no description available & (reliability: 714.0) & (original description: Putative RABA2B, Description = Ras-related protein RABA2b, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf09997_51816-55789' '(at3g24620 : 534.0) Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.; RHO guanyl-nucleotide exchange factor 8 (ROPGEF8); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 9 (TAIR:AT4G13240.1); Has 311 Blast hits to 307 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 309; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|67377 : 483.0) no description available & (reliability: 1068.0) & (original description: Putative BnaA07g19700D, Description = BnaA07g19700D protein, PFAM = PF03759)' T '30.5' 'signalling.G-proteins' 'niben101scf10007_54789-71907' '(at4g39520 : 622.0) Encodes a member of the DRG (developmentally regulated G-protein) family. Has GTPase activity.; GTP-binding protein-related; FUNCTIONS IN: GDP binding, GTP binding, GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), TGS (InterPro:IPR004095), GTP1/OBG (InterPro:IPR006073), GTP1/OBG, conserved site (InterPro:IPR006074), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: developmentally regulated G-protein 1 (TAIR:AT1G17470.2); Has 19252 Blast hits to 19228 proteins in 2957 species: Archae - 773; Bacteria - 12312; Metazoa - 831; Fungi - 661; Plants - 370; Viruses - 0; Other Eukaryotes - 4305 (source: NCBI BLink). & (gnl|cdd|36700 : 596.0) no description available & (gnl|cdd|31357 : 517.0) no description available & (reliability: 1244.0) & (original description: Putative DRG3, Description = Developmentally-regulated G-protein 3, PFAM = PF16897;PF02824;PF01926)' T '30.5' 'signalling.G-proteins' 'niben101scf10053_33728-47291' '(at5g27540 : 857.0) Encodes a protein with similarity to GTPases that is localized to the mitochondrion. Involved in embryogenesis, pollen tube growth and required for mitochondrial development.; MIRO-related GTP-ase 1 (MIRO1); FUNCTIONS IN: GTP binding; INVOLVED IN: pollen tube growth, mitochondrion organization, embryo development, embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF hand associated, type-1 (InterPro:IPR013566), Mitochondrial Rho-like (InterPro:IPR013684), EF hand associated, type-2 (InterPro:IPR013567), Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Mitochondrial Rho GTPase (InterPro:IPR021181), MIRO (InterPro:IPR020860); BEST Arabidopsis thaliana protein match is: MIRO-related GTP-ase 2 (TAIR:AT3G63150.1); Has 8016 Blast hits to 7980 proteins in 467 species: Archae - 6; Bacteria - 176; Metazoa - 4167; Fungi - 1485; Plants - 887; Viruses - 0; Other Eukaryotes - 1295 (source: NCBI BLink). & (gnl|cdd|36919 : 752.0) no description available & (gnl|cdd|57976 : 247.0) no description available & (reliability: 1714.0) & (original description: Putative MIRO1, Description = Mitochondrial Rho GTPase 1, PFAM = PF08356;PF08355;PF00071;PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf10074_101346-103984' '(at5g56230 : 142.0) prenylated RAB acceptor 1.G2 (PRA1.G2); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: prenylated RAB acceptor 1.G1 (TAIR:AT1G55640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38352 : 140.0) no description available & (gnl|cdd|86276 : 108.0) no description available & (reliability: 284.0) & (original description: Putative PRA1G2, Description = PRA1 family protein G2, PFAM = PF03208)' T '30.5' 'signalling.G-proteins' 'niben101scf10124_355659-378716' '(at5g52580 : 631.0) RabGAP/TBC domain-containing protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195), Protein of unknown function DUF3548 (InterPro:IPR021935); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT4G27100.2). & (gnl|cdd|37408 : 187.0) no description available & (gnl|cdd|47500 : 89.6) no description available & (reliability: 1262.0) & (original description: Putative umc2070, Description = RabGAP/TBC domain-containing protein, PFAM = PF12068;PF00566;PF00566)' T '30.5' 'signalling.G-proteins' 'niben101scf10124_356345-359787' '(at5g52580 : 244.0) RabGAP/TBC domain-containing protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195), Protein of unknown function DUF3548 (InterPro:IPR021935); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT4G27100.2). & (gnl|cdd|37408 : 106.0) no description available & (reliability: 488.0) & (original description: Putative umc2070, Description = RabGAP/TBC domain-containing protein, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben101scf10144_200369-207880' '(at1g55040 : 488.0) zinc finger (Ran-binding) family protein; FUNCTIONS IN: binding, zinc ion binding; LOCATED IN: nucleus; EXPRESSED IN: cultured cell, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.1); Has 22562 Blast hits to 12307 proteins in 1055 species: Archae - 52; Bacteria - 6108; Metazoa - 7873; Fungi - 2055; Plants - 2458; Viruses - 215; Other Eukaryotes - 3801 (source: NCBI BLink). & (gnl|cdd|39399 : 135.0) no description available & (reliability: 976.0) & (original description: Putative Sb02g009630, Description = Putative uncharacterized protein Sb02g009630, PFAM = PF00641;PF00641)' T '30.5' 'signalling.G-proteins' 'niben101scf10152_368754-371407' '(gnl|cdd|38352 : 193.0) no description available & (at2g38360 : 190.0) prenylated RAB acceptor 1.B4 (PRA1.B4); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: prenylated RAB acceptor 1.B5 (TAIR:AT5G01640.1); Has 506 Blast hits to 506 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 53; Plants - 299; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|86276 : 155.0) no description available & (reliability: 358.0) & (original description: Putative PRA1B4, Description = PRA1 family protein B4, PFAM = PF03208)' T '30.5' 'signalling.G-proteins' 'niben101scf10268_13664-21359' '(at5g45750 : 359.0) RAB GTPase homolog A1C (RABA1c); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane, nucleus, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1D (TAIR:AT4G18800.1); Has 28355 Blast hits to 28298 proteins in 771 species: Archae - 32; Bacteria - 162; Metazoa - 14720; Fungi - 4238; Plants - 3283; Viruses - 20; Other Eukaryotes - 5900 (source: NCBI BLink). & (p40393|ric2_orysa : 348.0) Ras-related protein RIC2 - Oryza sativa (Rice) & (gnl|cdd|35310 : 340.0) no description available & (gnl|cdd|57954 : 318.0) no description available & (reliability: 718.0) & (original description: Putative rab, Description = Small GTP Rab11, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf10388_196123-198437' '(gnl|cdd|35504 : 121.0) no description available & (at3g15470 : 118.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G54200.1); Has 35932 Blast hits to 22007 proteins in 749 species: Archae - 56; Bacteria - 5680; Metazoa - 13723; Fungi - 7656; Plants - 4267; Viruses - 6; Other Eukaryotes - 4544 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative At2g37670, Description = WD repeat-containing protein 44, PFAM = PF00400)' T '30.5' 'signalling.G-proteins' 'niben101scf10476_262722-267978' '(at2g44610 : 358.0) Encodes a GTP-binding protein with similarity to yeast YPT6 . RAB6 can complement the yeast YTP mutant.; RAB6A; FUNCTIONS IN: protein binding, GTP binding; INVOLVED IN: secretion by cell; LOCATED IN: plasma membrane, membrane fraction; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab6-related (InterPro:IPR015600); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog H1E (TAIR:AT5G10260.1); Has 26612 Blast hits to 26583 proteins in 727 species: Archae - 21; Bacteria - 159; Metazoa - 14143; Fungi - 3598; Plants - 2938; Viruses - 20; Other Eukaryotes - 5733 (source: NCBI BLink). & (gnl|cdd|35317 : 334.0) no description available & (gnl|cdd|57947 : 299.0) no description available & (p31583|rhn1_nicpl : 146.0) Ras-related protein RHN1 - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 716.0) & (original description: Putative RABH1B, Description = Ras-related protein RABH1b, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf10579_213996-224424' '(q6z808|rac3_orysa : 293.0) Rac-like GTP-binding protein 3 (OsRac3) - Oryza sativa (Rice) & (at3g48040 : 283.0) Encodes a member of the Rop subfamily of Rho GTPases in Arabidopsis that contains a putative farnesylation motif. It is localized to the plasma membrane and involved in the negative regulation of ABA signalling.; RHO-related protein from plants 10 (ROP10); CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RAC-like 10 (TAIR:AT5G62880.1); Has 24141 Blast hits to 24113 proteins in 664 species: Archae - 8; Bacteria - 48; Metazoa - 12688; Fungi - 3443; Plants - 2679; Viruses - 20; Other Eukaryotes - 5255 (source: NCBI BLink). & (gnl|cdd|58016 : 268.0) no description available & (gnl|cdd|35614 : 219.0) no description available & (reliability: 566.0) & (original description: Putative rac1, Description = Rac-like GTP-binding protein 3, PFAM = PF00071;PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf10918_50594-62491' '(at2g20440 : 571.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT4G28550.1); Has 4119 Blast hits to 3964 proteins in 226 species: Archae - 0; Bacteria - 0; Metazoa - 2231; Fungi - 720; Plants - 635; Viruses - 0; Other Eukaryotes - 533 (source: NCBI BLink). & (gnl|cdd|37408 : 330.0) no description available & (gnl|cdd|47500 : 127.0) no description available & (reliability: 1142.0) & (original description: Putative At2g20440, Description = RabGAP/TBC domain-containing protein, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben101scf10918_52991-55894' '(at4g28550 : 190.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: sperm cell, root, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G20440.2); Has 4375 Blast hits to 4233 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 2348; Fungi - 794; Plants - 640; Viruses - 0; Other Eukaryotes - 593 (source: NCBI BLink). & (gnl|cdd|37408 : 124.0) no description available & (gnl|cdd|47500 : 86.1) no description available & (reliability: 380.0) & (original description: Putative At2g20440, Description = RabGAP/TBC domain-containing family protein, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben101scf11356_797-5091' '(at3g07410 : 325.0) RAB GTPase homolog A5B (RABA5b); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G43130.1); Has 27936 Blast hits to 27886 proteins in 749 species: Archae - 21; Bacteria - 143; Metazoa - 14734; Fungi - 3835; Plants - 3288; Viruses - 20; Other Eukaryotes - 5895 (source: NCBI BLink). & (gnl|cdd|35310 : 276.0) no description available & (gnl|cdd|57954 : 274.0) no description available & (q39572|yptc6_chlre : 232.0) Ras-related protein YPTC6 - Chlamydomonas reinhardtii & (reliability: 650.0) & (original description: Putative RABA5B, Description = Ras-related protein RABA5b, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf11362_185136-189737' '(at5g60860 : 389.0) RAB GTPase homolog A1F (RABA1f); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1G (TAIR:AT3G15060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q40521|rb11b_tobac : 383.0) Ras-related protein Rab11B - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35310 : 345.0) no description available & (gnl|cdd|57954 : 320.0) no description available & (reliability: 778.0) & (original description: Putative RABA1F, Description = Ras-related protein RABA1f, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf11709_266710-271919' '(at3g07880 : 285.0) SUPERCENTIPEDE1 (SCN1); FUNCTIONS IN: Rho GDP-dissociation inhibitor activity; INVOLVED IN: root epidermal cell differentiation, cell tip growth; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), RHO protein GDP dissociation inhibitor (InterPro:IPR000406); BEST Arabidopsis thaliana protein match is: Immunoglobulin E-set superfamily protein (TAIR:AT1G62450.1); Has 660 Blast hits to 660 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 325; Fungi - 162; Plants - 120; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|38415 : 246.0) no description available & (gnl|cdd|65863 : 104.0) no description available & (reliability: 570.0) & (original description: Putative GDI1, Description = Rho GDP-dissociation inhibitor 1, PFAM = PF02115)' T '30.5' 'signalling.G-proteins' 'niben101scf12017_451092-519965' '(at4g16340 : 2797.0) mutant has Seedling lethal; Cotyledon, leaf-shape, trichome defects; Putative Cytoskeletal Protein; SPIKE1 (SPK1); FUNCTIONS IN: GTPase binding, GTP binding, guanyl-nucleotide exchange factor activity; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dedicator of cytokinesis (InterPro:IPR010703); Has 1667 Blast hits to 1104 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 1334; Fungi - 77; Plants - 63; Viruses - 0; Other Eukaryotes - 193 (source: NCBI BLink). & (gnl|cdd|37208 : 919.0) no description available & (gnl|cdd|70391 : 247.0) no description available & (reliability: 5594.0) & (original description: Putative SPK1, Description = Guanine nucleotide exchange factor SPIKE 1, PFAM = PF14429;PF06920)' T '30.5' 'signalling.G-proteins' 'niben101scf12045_735370-737993' '(gnl|cdd|38352 : 171.0) no description available & (gnl|cdd|86276 : 138.0) no description available & (at1g08770 : 118.0) prenylated RAB acceptor 1.E (PRA1.E); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: PRA1 (Prenylated rab acceptor) family protein (TAIR:AT1G55190.1); Has 522 Blast hits to 522 proteins in 132 species: Archae - 0; Bacteria - 0; Metazoa - 107; Fungi - 87; Plants - 296; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative PRA4, Description = PRA1 family protein F2, PFAM = PF03208)' T '30.5' 'signalling.G-proteins' 'niben101scf12159_880972-896270' '(at2g38840 : 741.0) Guanylate-binding family protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: immune response; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Guanylate-binding protein, N-terminal (InterPro:IPR015894), Guanylate-binding protein, C-terminal (InterPro:IPR003191); BEST Arabidopsis thaliana protein match is: Guanylate-binding family protein (TAIR:AT5G46070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|57943 : 165.0) no description available & (gnl|cdd|37248 : 86.9) no description available & (reliability: 1482.0) & (original description: Putative TCM_004228, Description = Guanylate-binding family protein isoform 2, PFAM = PF02263;PF02841)' T '30.5' 'signalling.G-proteins' 'niben101scf13141_69809-80595' '(at3g49350 : 569.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT5G24390.1); Has 4289 Blast hits to 3657 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 2316; Fungi - 775; Plants - 693; Viruses - 0; Other Eukaryotes - 505 (source: NCBI BLink). & (gnl|cdd|37408 : 352.0) no description available & (gnl|cdd|47500 : 117.0) no description available & (reliability: 1138.0) & (original description: Putative BnaUnng00190D, Description = BnaUnng00190D protein, PFAM = PF00566)' T '30.5' 'signalling.G-proteins' 'niben101scf13185_181747-188002' '(at3g07880 : 166.0) SUPERCENTIPEDE1 (SCN1); FUNCTIONS IN: Rho GDP-dissociation inhibitor activity; INVOLVED IN: root epidermal cell differentiation, cell tip growth; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), RHO protein GDP dissociation inhibitor (InterPro:IPR000406); BEST Arabidopsis thaliana protein match is: Immunoglobulin E-set superfamily protein (TAIR:AT1G62450.1); Has 660 Blast hits to 660 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 325; Fungi - 162; Plants - 120; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|38415 : 158.0) no description available & (gnl|cdd|65863 : 97.8) no description available & (reliability: 332.0) & (original description: Putative GDI1, Description = Rho GDP-dissociation inhibitor 1, PFAM = PF02115)' T '30.5' 'signalling.G-proteins' 'niben101scf13594_336896-346672' '(at2g23460 : 1093.0) encodes a novel G-alpha protein that shares similarity to plant, yeast, and animal G-alpha proteins at the C-terminus. It contains an N-terminus that is as large as the C-terminus, is a member of a small family, and is expressed in all tissues examined, including roots, leaves, stems, flowers, and fruits.; extra-large G-protein 1 (XLG1); FUNCTIONS IN: signal transducer activity, guanyl nucleotide binding; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Guanine nucleotide binding protein (G-protein), alpha subunit (InterPro:IPR001019), G protein alpha subunit, helical insertion (InterPro:IPR011025); BEST Arabidopsis thaliana protein match is: extra-large GTP-binding protein 3 (TAIR:AT1G31930.3); Has 3427 Blast hits to 3422 proteins in 394 species: Archae - 0; Bacteria - 2; Metazoa - 2220; Fungi - 618; Plants - 355; Viruses - 0; Other Eukaryotes - 232 (source: NCBI BLink). & (gnl|cdd|35305 : 263.0) no description available & (gnl|cdd|57932 : 248.0) no description available & (o04279|gpa2_pea : 165.0) Guanine nucleotide-binding protein alpha-2 subunit (GP-alpha-2) - Pisum sativum (Garden pea) & (reliability: 2186.0) & (original description: Putative XLG1, Description = Extra-large guanine nucleotide-binding protein 1, PFAM = PF00503)' T '30.5' 'signalling.G-proteins' 'niben101scf13741_68261-93541' '(at1g56050 : 600.0) GTP-binding protein-related; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF933 (InterPro:IPR013029), TGS-like (InterPro:IPR012676), GTP1/OBG (InterPro:IPR006073), Conserved hypothetical protein CHP00092 (InterPro:IPR004396), GTP-binding protein, HSR1-related (InterPro:IPR002917), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: GTP binding (TAIR:AT1G30580.1); Has 18400 Blast hits to 18396 proteins in 3002 species: Archae - 377; Bacteria - 10244; Metazoa - 785; Fungi - 603; Plants - 304; Viruses - 0; Other Eukaryotes - 6087 (source: NCBI BLink). & (gnl|cdd|83103 : 583.0) no description available & (gnl|cdd|36704 : 420.0) no description available & (reliability: 1200.0) & (original description: Putative ychF, Description = Ribosome-binding ATPase YchF, PFAM = PF01926;PF06071)' T '30.5' 'signalling.G-proteins' 'niben101scf14012_90600-101198' '(gnl|cdd|81586 : 320.0) no description available & (at5g08650 : 307.0) Small GTP-binding protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), GTP-binding protein LepA, C-terminal (InterPro:IPR013842), Protein synthesis factor, GTP-binding (InterPro:IPR000795), GTP-binding protein LepA (InterPro:IPR006297), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Small GTP-binding protein (TAIR:AT5G39900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35683 : 264.0) no description available & (o23755|ef2_betvu : 98.2) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (reliability: 614.0) & (original description: Putative lepA, Description = EF-4, PFAM = PF00009)' T '30.5' 'signalling.G-proteins' 'niben101scf14778_38046-43961' '(at4g35860 : 399.0) GTP-binding protein ATGB2; GTP-binding 2 (GB2); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Ras small GTPase, Rab type (InterPro:IPR003579), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog B1C (TAIR:AT4G17170.1); Has 23664 Blast hits to 23631 proteins in 677 species: Archae - 2; Bacteria - 77; Metazoa - 12254; Fungi - 3226; Plants - 2690; Viruses - 20; Other Eukaryotes - 5395 (source: NCBI BLink). & (q39570|yptc4_chlre : 356.0) GTP-binding protein YPTC4 - Chlamydomonas reinhardtii & (gnl|cdd|35321 : 351.0) no description available & (gnl|cdd|57952 : 333.0) no description available & (reliability: 798.0) & (original description: Putative RABB1B, Description = Ras-related protein RABB1b, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf15131_10298-15405' '(at3g07880 : 290.0) SUPERCENTIPEDE1 (SCN1); FUNCTIONS IN: Rho GDP-dissociation inhibitor activity; INVOLVED IN: root epidermal cell differentiation, cell tip growth; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), RHO protein GDP dissociation inhibitor (InterPro:IPR000406); BEST Arabidopsis thaliana protein match is: Immunoglobulin E-set superfamily protein (TAIR:AT1G62450.1); Has 660 Blast hits to 660 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 325; Fungi - 162; Plants - 120; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|38415 : 251.0) no description available & (gnl|cdd|65863 : 115.0) no description available & (reliability: 580.0) & (original description: Putative GDI1, Description = Rho GDP-dissociation inhibitor 1, PFAM = PF02115)' T '30.5' 'signalling.G-proteins' 'niben101scf16332_87086-94678' '(at5g64813 : 446.0) The LIP1 gene encodes a small GTPase that influences the light input pathway of the plant circadian network. An MBP:LIP1 fusion protein has GTP hydrolyzing abilities in vitro. In plants, LIP1 seems to play a negative role in regulating circadian period that can be suppressed by light. LIP1 also seems to negatively affect light-pulse-dependent resetting of the clock, especially during the first portion of the subjective evening. LIP1 expression levels are not significantly affected by the circadian clock in seedlings grown under LL conditions. The levels of the YFP:LIP1 protein expressed under the control of the 35S promoter, shows a low amplitude variation, with protein levels peaking near the beginning of subjective night under LL conditions. In hypocotyl epidermal cells of dark and light-grown seedlings, a YFP:LIP1 fusion protein can be seen in the cytoplasm and the nucleus, and does not cluster in nuclear speckles. LIP1 may also be involved in photomorphogenesis.; Light Insensitive Period1 (LIP1); FUNCTIONS IN: GTPase activity; INVOLVED IN: circadian regulation of gene expression, photomorphogenesis; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), RNA polymerase sigma factor 54, interaction (InterPro:IPR002078); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT5G09910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|57985 : 255.0) no description available & (reliability: 892.0) & (original description: Putative At5g64813, Description = Uncharacterized GTP-binding protein At5g64813, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf16705_5933-13229' '(at3g11730 : 346.0) Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. It has also been identified as an isoprenylated protein.; ATFP8; FUNCTIONS IN: GTP binding, myosin XI tail binding, GTP-dependent protein binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 1A (TAIR:AT5G47200.1); Has 29795 Blast hits to 29734 proteins in 779 species: Archae - 25; Bacteria - 142; Metazoa - 15645; Fungi - 4180; Plants - 3599; Viruses - 20; Other Eukaryotes - 6184 (source: NCBI BLink). & (p40392|ric1_orysa : 333.0) Ras-related protein RIC1 - Oryza sativa (Rice) & (gnl|cdd|57955 : 317.0) no description available & (gnl|cdd|35307 : 313.0) no description available & (reliability: 692.0) & (original description: Putative RABD1, Description = Ras-related protein RABD1, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf18551_1-7737' '(q40522|rb11d_tobac : 435.0) Ras-related protein Rab11D - Nicotiana tabacum (Common tobacco) & (at5g65270 : 382.0) RAB GTPase homolog A4A (RABA4a); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A4B (TAIR:AT4G39990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35310 : 326.0) no description available & (gnl|cdd|57954 : 309.0) no description available & (reliability: 764.0) & (original description: Putative RAB11C, Description = Ras-related protein Rab11C, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf20512_144858-149832' '(q40521|rb11b_tobac : 417.0) Ras-related protein Rab11B - Nicotiana tabacum (Common tobacco) & (at5g60860 : 379.0) RAB GTPase homolog A1F (RABA1f); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1G (TAIR:AT3G15060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35310 : 342.0) no description available & (gnl|cdd|57954 : 323.0) no description available & (reliability: 758.0) & (original description: Putative RAB11B, Description = Ras-related protein Rab11B, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf21468_23707-28968' '(at5g52210 : 330.0) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.; GTP-binding protein 1 (GB1); FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor A1F (TAIR:AT1G10630.1); Has 10306 Blast hits to 10286 proteins in 478 species: Archae - 29; Bacteria - 165; Metazoa - 4931; Fungi - 1428; Plants - 1618; Viruses - 0; Other Eukaryotes - 2135 (source: NCBI BLink). & (gnl|cdd|58043 : 249.0) no description available & (gnl|cdd|35299 : 246.0) no description available & (p51823|arf2_orysa : 121.0) ADP-ribosylation factor 2 - Oryza sativa (Rice) & (reliability: 660.0) & (original description: Putative arf7, Description = Small Arf-related GTPase, PFAM = PF00025)' T '30.5' 'signalling.G-proteins' 'niben101scf22195_98712-106172' '(at4g02730 : 424.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 105879 Blast hits to 41942 proteins in 964 species: Archae - 68; Bacteria - 10657; Metazoa - 43181; Fungi - 22509; Plants - 14298; Viruses - 12; Other Eukaryotes - 15154 (source: NCBI BLink). & (gnl|cdd|35487 : 280.0) no description available & (gnl|cdd|29257 : 251.0) no description available & (p25387|gblp_chlre : 107.0) Guanine nucleotide-binding protein subunit beta-like protein - Chlamydomonas reinhardtii & (reliability: 848.0) & (original description: Putative WDR5B, Description = COMPASS-like H3K4 histone methylase component WDR5B, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '30.5' 'signalling.G-proteins' 'niben101scf22318_19307-30613' '(at3g06540 : 500.0) Rab escort protein (REP); FUNCTIONS IN: RAB GDP-dissociation inhibitor activity; INVOLVED IN: intracellular protein transport, regulation of GTPase activity, protein transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rab GTPase activator (InterPro:IPR002005), Rab protein geranylgeranyltransferase component A, eukaryota (InterPro:IPR016664), Yeast Mrs6p protein (InterPro:IPR000632), GDP dissociation inhibitor (InterPro:IPR018203); BEST Arabidopsis thaliana protein match is: guanosine nucleotide diphosphate dissociation inhibitor 1 (TAIR:AT2G44100.1); Has 1226 Blast hits to 1117 proteins in 247 species: Archae - 0; Bacteria - 2; Metazoa - 578; Fungi - 292; Plants - 178; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (gnl|cdd|39606 : 343.0) no description available & (gnl|cdd|64840 : 183.0) no description available & (reliability: 1000.0) & (original description: Putative REP, Description = Rab escort protein 1, PFAM = PF00996;PF00996)' T '30.5' 'signalling.G-proteins' 'niben101scf24384_15118-19691' '(at5g58590 : 214.0) Encodes a Ran-binding protein 1 homolog (RanBP1).; RAN binding protein 1 (RANBP1); FUNCTIONS IN: protein binding; INVOLVED IN: protein import into nucleus, translocation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein 1 (InterPro:IPR000156), Pleckstrin homology-type (InterPro:IPR011993); BEST Arabidopsis thaliana protein match is: Pleckstrin homology (PH) domain superfamily protein (TAIR:AT2G30060.1); Has 1560 Blast hits to 1231 proteins in 240 species: Archae - 0; Bacteria - 8; Metazoa - 836; Fungi - 365; Plants - 158; Viruses - 15; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|29845 : 133.0) no description available & (gnl|cdd|36082 : 82.1) no description available & (reliability: 428.0) & (original description: Putative RANBP1, Description = Ran-specific GTPase-activating protein, PFAM = PF00638)' T '30.5' 'signalling.G-proteins' 'niben101scf24608_16762-22014' '(at4g38430 : 681.0) Member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily, also known as DUF315). Interacts with ROP1 but the whole protein lacks Rho guanyl-nucleotide exchange factor activity in vitro. The DUF315/PRONE domain is sufficient to confer RopGEF catalytic activity.; rho guanyl-nucleotide exchange factor 1 (ROPGEF1); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 7 (TAIR:AT5G02010.1); Has 308 Blast hits to 304 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 308; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67377 : 475.0) no description available & (reliability: 1362.0) & (original description: Putative ROPGEF1, Description = Rop guanine nucleotide exchange factor 1, PFAM = PF03759)' T '30.5' 'signalling.G-proteins' 'niben101scf28100_32835-40205' '(gnl|cdd|57946 : 275.0) no description available & (gnl|cdd|35315 : 256.0) no description available & (p31583|rhn1_nicpl : 251.0) Ras-related protein RHN1 - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g45130 : 237.0) small GTP binding protein; RAB homolog 1 (RHA1); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab5-related (InterPro:IPR015599); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT4G19640.1); Has 26267 Blast hits to 26237 proteins in 716 species: Archae - 26; Bacteria - 136; Metazoa - 13722; Fungi - 3681; Plants - 2979; Viruses - 20; Other Eukaryotes - 5703 (source: NCBI BLink). & (reliability: 474.0) & (original description: Putative mras, Description = Ras-related protein Rab-5C, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf28100_32920-40166' '(gnl|cdd|57946 : 273.0) no description available & (gnl|cdd|35315 : 250.0) no description available & (p29687|rab5_tobac : 235.0) Ras-related protein Rab5 - Nicotiana tabacum (Common tobacco) & (at5g45130 : 228.0) small GTP binding protein; RAB homolog 1 (RHA1); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab5-related (InterPro:IPR015599); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT4G19640.1); Has 26267 Blast hits to 26237 proteins in 716 species: Archae - 26; Bacteria - 136; Metazoa - 13722; Fungi - 3681; Plants - 2979; Viruses - 20; Other Eukaryotes - 5703 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative mras, Description = Ras-related protein Rab-5C, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf29276_6462-11675' '(at3g54840 : 224.0) Encodes a novel Rab-like GTP-ase that is localized to the peripheral membrane of the endosome.; ARA6; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab5-related (InterPro:IPR015599); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT4G19640.1); Has 25937 Blast hits to 25894 proteins in 712 species: Archae - 24; Bacteria - 131; Metazoa - 13614; Fungi - 3531; Plants - 2862; Viruses - 20; Other Eukaryotes - 5755 (source: NCBI BLink). & (gnl|cdd|57946 : 177.0) no description available & (gnl|cdd|35315 : 151.0) no description available & (p31583|rhn1_nicpl : 134.0) Ras-related protein RHN1 - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 448.0) & (original description: Putative ara6, Description = Ras-related protein Rab-5C, PFAM = PF00071)' T '30.5' 'signalling.G-proteins' 'niben101scf29530_1-11273' '(at4g03100 : 451.0) Rho GTPase activating protein with PAK-box/P21-Rho-binding domain; FUNCTIONS IN: Rac GTPase activator activity; INVOLVED IN: signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095), Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198); BEST Arabidopsis thaliana protein match is: Rho GTPase activating protein with PAK-box/P21-Rho-binding domain (TAIR:AT5G22400.1); Has 3907 Blast hits to 3903 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 2865; Fungi - 460; Plants - 187; Viruses - 0; Other Eukaryotes - 395 (source: NCBI BLink). & (gnl|cdd|39471 : 288.0) no description available & (gnl|cdd|63840 : 108.0) no description available & (reliability: 902.0) & (original description: Putative ROPGAP2, Description = Rho GTPase-activating protein 2, PFAM = PF00786;PF00620)' T '30.6' 'signalling.MAP kinases' 'nbv0.3scaffold2899_1-19510' '(at5g49470 : 628.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT1G67890.1). & (gnl|cdd|35413 : 326.0) no description available & (gnl|cdd|87344 : 251.0) no description available & (q8l4h4|nork_medtr : 118.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1200.0) & (original description: Putative EDR1, Description = Serine/threonine-protein kinase CTR1, PFAM = PF07714)' T '30.6' 'signalling.MAP kinases' 'nbv0.3scaffold6130_45133-54673' '(at4g08500 : 406.0) Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301. Mediates cold, salt, cadmium and wounding stress signalling. Phosphorylates MEK1.; MAPK/ERK kinase kinase 1 (MEKK1); FUNCTIONS IN: protein binding, kinase binding, DNA binding, MAP kinase kinase kinase activity, kinase activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 9 (TAIR:AT4G08480.1); Has 132336 Blast hits to 130259 proteins in 4567 species: Archae - 142; Bacteria - 14700; Metazoa - 49430; Fungi - 12971; Plants - 32949; Viruses - 685; Other Eukaryotes - 21459 (source: NCBI BLink). & (gnl|cdd|35419 : 283.0) no description available & (gnl|cdd|29142 : 267.0) no description available & (q5qn75|m2k1_orysa : 124.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 812.0) & (original description: Putative MEKK1, Description = Mitogen-activated protein kinase kinase kinase 1, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'nbv0.3scaffold8087_14994-20198' '(at5g67130 : 550.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phospholipase C activity, phosphoric diester hydrolase activity; INVOLVED IN: intracellular signaling pathway, lipid metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT1G49740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1100.0) & (original description: Putative LjNUF, Description = PLC-like phosphodiesterases superfamily protein, PFAM = )' T '30.6' 'signalling.MAP kinases' 'nbv0.3scaffold10849_14592-39630' '(at1g08720 : 726.0) enhanced disease resistance 1 (EDR1) confers resistance to powdery mildew disease caused by the fungus Erysiphe cichoracearum; ENHANCED DISEASE RESISTANCE 1 (EDR1); FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, MAP kinase kinase kinase activity, kinase activity; INVOLVED IN: in 7 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G11850.1); Has 120792 Blast hits to 119043 proteins in 4682 species: Archae - 98; Bacteria - 12672; Metazoa - 46002; Fungi - 10646; Plants - 32815; Viruses - 475; Other Eukaryotes - 18084 (source: NCBI BLink). & (gnl|cdd|35413 : 242.0) no description available & (gnl|cdd|29142 : 182.0) no description available & (o24585|cri4_maize : 90.5) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 1452.0) & (original description: Putative EDR1, Description = Serine/threonine-protein kinase EDR1, PFAM = PF14381;PF07714)' T '30.6' 'signalling.MAP kinases' 'nbv0.3scaffold19755_9320-18706' '(at1g73670 : 637.0) member of MAP Kinase; MAP kinase 15 (MPK15); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18150.3); Has 118424 Blast hits to 117259 proteins in 3821 species: Archae - 110; Bacteria - 13457; Metazoa - 43793; Fungi - 12258; Plants - 28693; Viruses - 571; Other Eukaryotes - 19542 (source: NCBI BLink). & (q53n72|mpk15_orysa : 622.0) Mitogen-activated protein kinase 15 (EC 2.7.11.24) (MAP kinase 15) - Oryza sativa (Rice) & (gnl|cdd|35879 : 474.0) no description available & (gnl|cdd|29142 : 270.0) no description available & (reliability: 1274.0) & (original description: Putative MPK15, Description = Mitogen-activated protein kinase 15, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'nbv0.3scaffold37090_5881-10212' '(at3g06620 : 275.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, catalytic domain (InterPro:IPR000719), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT5G49470.3); Has 125703 Blast hits to 124182 proteins in 4625 species: Archae - 237; Bacteria - 14697; Metazoa - 46775; Fungi - 11283; Plants - 33084; Viruses - 499; Other Eukaryotes - 19128 (source: NCBI BLink). & (reliability: 540.0) & (original description: Putative At1g67890, Description = Tyrosine protein kinase, PFAM = PF00989)' T '30.6' 'signalling.MAP kinases' 'nbv0.3scaffold41947_5492-14819' '(at5g49470 : 828.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT1G67890.1). & (gnl|cdd|35413 : 333.0) no description available & (gnl|cdd|87344 : 254.0) no description available & (q8l4h4|nork_medtr : 120.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1630.0) & (original description: Putative At5g49470, Description = PAS domain-containing protein tyrosine kinase, PFAM = PF00989;PF07714)' T '30.6' 'signalling.MAP kinases' 'nbv0.3scaffold44444_8503-17408' '(at5g56580 : 567.0) Encodes a member of the MAP Kinase Kinase family of proteins. It can phosphorylate MPK12 in vitro and it can be dephosphorylated by MKP2 in vitro.; MAP kinase kinase 6 (MKK6); FUNCTIONS IN: MAP kinase kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: MAP kinase kinase 2 (TAIR:AT4G29810.1); Has 125172 Blast hits to 123800 proteins in 4446 species: Archae - 151; Bacteria - 14363; Metazoa - 46867; Fungi - 12279; Plants - 30893; Viruses - 513; Other Eukaryotes - 20106 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 522.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (gnl|cdd|35801 : 425.0) no description available & (gnl|cdd|47550 : 243.0) no description available & (reliability: 1134.0) & (original description: Putative nqk1, Description = NQK1 MAPKK, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'nbv0.3scaffold56304_1-16874' '(at3g13530 : 1296.0) MAP3K epsilon protein kinase 1 is functionally redundant with MAP3Ke2. Required for pollen development but not essential. map3ke1;map3ke2 double-mutant pollen grains develop plasma membrane irregularities following pollen mitosis I. Localized primarily in the plasma membrane. Expressed in leaf trichomes, root columella cells and developing ovules.; mitogen-activated protein kinase kinase kinase 7 (MAPKKK7); FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: plasma membrane organization, pollen development; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: ovule developmental stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 6 (TAIR:AT3G07980.1); Has 137235 Blast hits to 134768 proteins in 5401 species: Archae - 190; Bacteria - 15422; Metazoa - 52001; Fungi - 13364; Plants - 33616; Viruses - 670; Other Eukaryotes - 21972 (source: NCBI BLink). & (gnl|cdd|29142 : 267.0) no description available & (gnl|cdd|35419 : 263.0) no description available & (q5qn75|m2k1_orysa : 125.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 2592.0) & (original description: Putative M3KE1, Description = MAP3K epsilon protein kinase 1, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'nbv0.3scaffold58522_782-7535' '(at5g66850 : 494.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 5 (MAPKKK5); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G63700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35419 : 293.0) no description available & (gnl|cdd|47550 : 268.0) no description available & (q5qn75|m2k1_orysa : 117.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 988.0) & (original description: Putative MAPKKKg, Description = Protein kinase, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'nbv0.3scaffold60451_310-9698' '(at4g23050 : 462.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity, signal transducer activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT5G49470.3); Has 125163 Blast hits to 123569 proteins in 4990 species: Archae - 182; Bacteria - 13357; Metazoa - 47772; Fungi - 11074; Plants - 33184; Viruses - 511; Other Eukaryotes - 19083 (source: NCBI BLink). & (gnl|cdd|35413 : 254.0) no description available & (gnl|cdd|87344 : 209.0) no description available & (o24585|cri4_maize : 110.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 924.0) & (original description: Putative CTR1, Description = Serine/threonine-protein kinase CTR1, PFAM = PF13426;PF07714)' T '30.6' 'signalling.MAP kinases' 'nbv0.3scaffold79913_1-2957' '(at5g11620 : 152.0) SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-related; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, SWIM-type (InterPro:IPR007527), Zinc finger, RING-type (InterPro:IPR001841); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative BnaC09g44980D, Description = BnaC09g44980D protein, PFAM = PF13639;PF04434)' T '30.6' 'signalling.MAP kinases' 'nbv0.3scaffold81612_2502-6844' '(at5g49470 : 296.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT1G67890.1). & (gnl|cdd|35413 : 187.0) no description available & (gnl|cdd|87344 : 151.0) no description available & (q8l4h4|nork_medtr : 91.3) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 566.0) & (original description: Putative CTR, Description = Serine/threonine-protein kinase CTR1, PFAM = PF07714)' T '30.6' 'signalling.MAP kinases' 'nbv0.5scaffold205_581262-596253' '(q40532|ntf4_tobac : 737.0) Mitogen-activated protein kinase homolog NTF4 (EC 2.7.11.24) (P45) - Nicotiana tabacum (Common tobacco) & (at2g43790 : 665.0) Encodes a MAP kinase induced by pathogens, ethylene biosynthesis, oxidative stress and osmotic stress.Also involved in ovule development. Homozygous mutants in a MPK3 heterozygous background are female sterile due to defects in integument development.MPK6 appears to be associated with the microsomal compartment and may be involved in mediating secretory processes.; MAP kinase 6 (MPK6); FUNCTIONS IN: MAP kinase activity, kinase activity; INVOLVED IN: in 20 processes; LOCATED IN: trans-Golgi network, preprophase band, phragmoplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), JNK MAP kinase (InterPro:IPR008351), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase 3 (TAIR:AT3G45640.1); Has 124968 Blast hits to 123484 proteins in 4565 species: Archae - 94; Bacteria - 13025; Metazoa - 47222; Fungi - 12634; Plants - 30512; Viruses - 574; Other Eukaryotes - 20907 (source: NCBI BLink). & (gnl|cdd|35879 : 510.0) no description available & (gnl|cdd|29142 : 265.0) no description available & (reliability: 1330.0) & (original description: Putative MMK1, Description = Mitogen-activated protein kinase homolog MMK1, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'nbv0.5scaffold340_616275-621479' '(at5g67130 : 550.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phospholipase C activity, phosphoric diester hydrolase activity; INVOLVED IN: intracellular signaling pathway, lipid metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT1G49740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1100.0) & (original description: Putative At5g67130, Description = PI-PLC X domain-containing protein At5g67130, PFAM = )' T '30.6' 'signalling.MAP kinases' 'nbv0.5scaffold845_10144-30843' '(at5g49470 : 731.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT1G67890.1). & (gnl|cdd|35413 : 330.0) no description available & (gnl|cdd|87344 : 257.0) no description available & (q8l4h4|nork_medtr : 116.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1416.0) & (original description: Putative CTR1, Description = Serine/threonine-protein kinase CTR1, PFAM = PF00989;PF07714)' T '30.6' 'signalling.MAP kinases' 'nbv0.5scaffold901_6149-25281' '(at3g15220 : 699.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytoplasm, spindle; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G53165.2); Has 133641 Blast hits to 131568 proteins in 4406 species: Archae - 196; Bacteria - 15456; Metazoa - 49688; Fungi - 12950; Plants - 32844; Viruses - 666; Other Eukaryotes - 21841 (source: NCBI BLink). & (gnl|cdd|35422 : 468.0) no description available & (gnl|cdd|29142 : 299.0) no description available & (q5qn75|m2k1_orysa : 148.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1398.0) & (original description: Putative stk25a, Description = Zgc:92836, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'nbv0.5scaffold1673_397491-405652' '(gnl|cdd|35804 : 407.0) no description available & (at5g58350 : 396.0) Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.; with no lysine (K) kinase 4 (WNK4); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 5 (TAIR:AT3G51630.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47550 : 146.0) no description available & (reliability: 792.0) & (original description: Putative oipk, Description = WNK kinase, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'nbv0.5scaffold1680_235405-242046' '(at5g58350 : 456.0) Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.; with no lysine (K) kinase 4 (WNK4); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 5 (TAIR:AT3G51630.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35804 : 405.0) no description available & (gnl|cdd|29142 : 151.0) no description available & (q5qn75|m2k1_orysa : 83.2) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 912.0) & (original description: Putative oipk, Description = Mitogen-activated protein kinase, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'nbv0.5scaffold2626_4617-11661' '(q53n72|mpk15_orysa : 611.0) Mitogen-activated protein kinase 15 (EC 2.7.11.24) (MAP kinase 15) - Oryza sativa (Rice) & (at1g73670 : 609.0) member of MAP Kinase; MAP kinase 15 (MPK15); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18150.3); Has 118424 Blast hits to 117259 proteins in 3821 species: Archae - 110; Bacteria - 13457; Metazoa - 43793; Fungi - 12258; Plants - 28693; Viruses - 571; Other Eukaryotes - 19542 (source: NCBI BLink). & (gnl|cdd|35879 : 456.0) no description available & (gnl|cdd|29142 : 253.0) no description available & (reliability: 1218.0) & (original description: Putative mpk6, Description = Mitogen-activated protein kinase, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'nbv0.5scaffold3010_192105-195172' '(at3g21220 : 477.0) Encodes a mitogen-activated kinase kinase, dual specific protein kinase that is expressed in vegetative tissues and floral buds. Involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK4.In plants with both MKK5 and MKK6 levels reduced by RNAi plants, floral organs do not abscise suggestion a role for both proteins in mediating floral organ abscission.; MAP kinase kinase 5 (MKK5); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase 4 (TAIR:AT1G51660.1); Has 130143 Blast hits to 128581 proteins in 4761 species: Archae - 120; Bacteria - 15121; Metazoa - 48301; Fungi - 12721; Plants - 32333; Viruses - 542; Other Eukaryotes - 21005 (source: NCBI BLink). & (gnl|cdd|35801 : 365.0) no description available & (gnl|cdd|47550 : 250.0) no description available & (q5qn75|m2k1_orysa : 229.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 954.0) & (original description: Putative MKK4, Description = Mitogen-activated protein kinase kinase 4, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'nbv0.5scaffold3308_205900-220388' '(at4g08500 : 420.0) Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301. Mediates cold, salt, cadmium and wounding stress signalling. Phosphorylates MEK1.; MAPK/ERK kinase kinase 1 (MEKK1); FUNCTIONS IN: protein binding, kinase binding, DNA binding, MAP kinase kinase kinase activity, kinase activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 9 (TAIR:AT4G08480.1); Has 132336 Blast hits to 130259 proteins in 4567 species: Archae - 142; Bacteria - 14700; Metazoa - 49430; Fungi - 12971; Plants - 32949; Viruses - 685; Other Eukaryotes - 21459 (source: NCBI BLink). & (gnl|cdd|35419 : 283.0) no description available & (gnl|cdd|29142 : 268.0) no description available & (q6x4a2|cipk1_orysa : 122.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 840.0) & (original description: Putative MEKK1, Description = Mitogen-activated protein kinase kinase kinase 1, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'nbv0.5scaffold3817_3970-13029' '(at4g23050 : 408.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity, signal transducer activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT5G49470.3); Has 125163 Blast hits to 123569 proteins in 4990 species: Archae - 182; Bacteria - 13357; Metazoa - 47772; Fungi - 11074; Plants - 33184; Viruses - 511; Other Eukaryotes - 19083 (source: NCBI BLink). & (gnl|cdd|35413 : 300.0) no description available & (gnl|cdd|87344 : 248.0) no description available & (q8l4h4|nork_medtr : 122.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 816.0) & (original description: Putative BnaCnng32230D, Description = BnaCnng32230D protein, PFAM = PF07714;PF13426)' T '30.6' 'signalling.MAP kinases' 'nbv0.5scaffold4458_187358-190395' '(at3g45640 : 176.0) Encodes a mitogen-activated kinase whose mRNA levels increase in response to touch, cold, salinity stress and chitin oligomers.Also functions in ovule development. Heterozygous MPK3 mutants in a homozygous MPK6 background are female sterile due to defects in integument development. MPK3 can be dephosphorylated by MKP2 in vitro.; mitogen-activated protein kinase 3 (MPK3); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: MAP kinase 6 (TAIR:AT2G43790.1); Has 124285 Blast hits to 122929 proteins in 4636 species: Archae - 100; Bacteria - 13249; Metazoa - 47024; Fungi - 12588; Plants - 30092; Viruses - 485; Other Eukaryotes - 20747 (source: NCBI BLink). & (q40532|ntf4_tobac : 152.0) Mitogen-activated protein kinase homolog NTF4 (EC 2.7.11.24) (P45) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35879 : 103.0) no description available & (reliability: 352.0) & (original description: Putative mpkb, Description = Mitogen-activated protein kinase, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'nbv0.5scaffold6964_63531-69413' '(gnl|cdd|35419 : 227.0) no description available & (gnl|cdd|29142 : 198.0) no description available & (at3g50310 : 177.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 20 (MAPKKK20); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 19 (TAIR:AT5G67080.1); Has 114114 Blast hits to 112767 proteins in 3610 species: Archae - 125; Bacteria - 11707; Metazoa - 43224; Fungi - 11427; Plants - 28864; Viruses - 487; Other Eukaryotes - 18280 (source: NCBI BLink). & (p53683|cdpk2_orysa : 100.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (reliability: 324.0) & (original description: Putative PGSC0003DMG400014807, Description = Mitogen-activated protein kinase kinase kinase 21, putative, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben044scf00001100ctg032_1-7081' '(at1g63700 : 705.0) Member of MEKK subfamily, a component of the stomatal development regulatory pathway. Mutations in this locus result in embryo lethality.; YODA (YDA); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: stomatal complex morphogenesis, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 3 (TAIR:AT1G53570.1); Has 133707 Blast hits to 131404 proteins in 4998 species: Archae - 148; Bacteria - 15191; Metazoa - 50613; Fungi - 12908; Plants - 32496; Viruses - 572; Other Eukaryotes - 21779 (source: NCBI BLink). & (gnl|cdd|35419 : 313.0) no description available & (gnl|cdd|29142 : 299.0) no description available & (q6x4a2|cipk1_orysa : 136.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1410.0) & (original description: Putative YDA, Description = Mitogen-activated protein kinase kinase kinase YODA, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben044scf00001730ctg001_1226-9878' '(at1g73670 : 765.0) member of MAP Kinase; MAP kinase 15 (MPK15); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18150.3); Has 118424 Blast hits to 117259 proteins in 3821 species: Archae - 110; Bacteria - 13457; Metazoa - 43793; Fungi - 12258; Plants - 28693; Viruses - 571; Other Eukaryotes - 19542 (source: NCBI BLink). & (q5z9j0|mpk12_orysa : 737.0) Mitogen-activated protein kinase 12 (EC 2.7.11.24) (MAP kinase 12) (OsBWMK1) (Blast- and wound-induced MAP kinase 1) (MAP kinase 1) (OsMAPK1) - Oryza sativa (Rice) & (gnl|cdd|35879 : 482.0) no description available & (gnl|cdd|29142 : 260.0) no description available & (reliability: 1530.0) & (original description: Putative MPK15, Description = Mitogen-activated protein kinase 15, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben044scf00001781ctg001_1-6674' '(at1g49740 : 542.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phospholipase C activity, phosphoric diester hydrolase activity; INVOLVED IN: intracellular signaling pathway, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT3G19310.1); Has 451 Blast hits to 448 proteins in 104 species: Archae - 0; Bacteria - 81; Metazoa - 8; Fungi - 159; Plants - 152; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (reliability: 1084.0) & (original description: Putative LjNUF, Description = Putative uncharacterized protein LjNUF, PFAM = )' T '30.6' 'signalling.MAP kinases' 'niben044scf00002751ctg010_6482-16108' '(at3g18040 : 803.0) Encodes a protein with similarity to MAP kinases (MAPK9).Expressed preferentially in guard cells and appears to be involved in reactive oxygen species mediated ABA signaling.; MAP kinase 9 (MPK9); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: MAP kinase 15 (TAIR:AT1G73670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5z9j0|mpk12_orysa : 764.0) Mitogen-activated protein kinase 12 (EC 2.7.11.24) (MAP kinase 12) (OsBWMK1) (Blast- and wound-induced MAP kinase 1) (MAP kinase 1) (OsMAPK1) - Oryza sativa (Rice) & (gnl|cdd|35879 : 481.0) no description available & (gnl|cdd|29142 : 265.0) no description available & (reliability: 1606.0) & (original description: Putative MPK9, Description = Mitogen-activated protein kinase 9, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben044scf00006307ctg003_5878-12359' '(at3g51630 : 531.0) Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases.; with no lysine (K) kinase 5 (WNK5); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 4 (TAIR:AT5G58350.1). & (gnl|cdd|35804 : 467.0) no description available & (gnl|cdd|47550 : 189.0) no description available & (q5qn75|m2k1_orysa : 80.1) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1062.0) & (original description: Putative FLR, Description = Mitogen-activated protein kinase, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben044scf00007599ctg001_210-2986' '(gnl|cdd|35419 : 284.0) no description available & (gnl|cdd|29142 : 250.0) no description available & (at5g55090 : 237.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 15 (MAPKKK15); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 16 (TAIR:AT4G26890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 126.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 442.0) & (original description: Putative BnaC08g12350D, Description = BnaC08g12350D protein, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben044scf00008935ctg000_1-12368' '(at1g73660 : 998.0) Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance.; protein tyrosine kinase family protein; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Ubiquitin interacting motif (InterPro:IPR003903), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18160.1); Has 126827 Blast hits to 124278 proteins in 4857 species: Archae - 98; Bacteria - 13376; Metazoa - 48156; Fungi - 11388; Plants - 33654; Viruses - 503; Other Eukaryotes - 19652 (source: NCBI BLink). & (gnl|cdd|35413 : 332.0) no description available & (gnl|cdd|87344 : 257.0) no description available & (q8lpb4|pskr_dauca : 105.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1934.0) & (original description: Putative MAPK, Description = Mitogen-activated protein kinase, PFAM = PF07714;PF14381)' T '30.6' 'signalling.MAP kinases' 'niben044scf00008984ctg003_1168-9690' '(at5g66850 : 440.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 5 (MAPKKK5); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G63700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35419 : 298.0) no description available & (gnl|cdd|47550 : 271.0) no description available & (q6x4a2|cipk1_orysa : 115.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 880.0) & (original description: Putative MAPKKK5, Description = Mitogen-activated protein kinase kinase kinase 5, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben044scf00009260ctg001_15290-33739' '(at3g15220 : 683.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytoplasm, spindle; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G53165.2); Has 133641 Blast hits to 131568 proteins in 4406 species: Archae - 196; Bacteria - 15456; Metazoa - 49688; Fungi - 12950; Plants - 32844; Viruses - 666; Other Eukaryotes - 21841 (source: NCBI BLink). & (gnl|cdd|35422 : 470.0) no description available & (gnl|cdd|29142 : 295.0) no description available & (q5qn75|m2k1_orysa : 151.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1366.0) & (original description: Putative stk25a, Description = Zgc:92836, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben044scf00010086ctg002_2823-7758' '(at4g29810 : 504.0) encodes a MAP kinase kinase 2 that regulates MPK6 and MPK4 in response to cold and salt stresses. Co-expression with MEKK1 in protoplasts activated MKK2 activity, suggesting that MEKK1 may be a regulator of MKK2.; MAP kinase kinase 2 (MKK2); FUNCTIONS IN: MAP kinase kinase activity, kinase activity; INVOLVED IN: cold acclimation, MAPKKK cascade, response to salt stress, response to cold, defense response, incompatible interaction; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: MAP kinase/ ERK kinase 1 (TAIR:AT4G26070.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35801 : 425.0) no description available & (q5qn75|m2k1_orysa : 415.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 255.0) no description available & (reliability: 1008.0) & (original description: Putative mek1, Description = MAP kinase kinase, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben044scf00012713ctg015_1-2826' '(at3g21220 : 471.0) Encodes a mitogen-activated kinase kinase, dual specific protein kinase that is expressed in vegetative tissues and floral buds. Involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK4.In plants with both MKK5 and MKK6 levels reduced by RNAi plants, floral organs do not abscise suggestion a role for both proteins in mediating floral organ abscission.; MAP kinase kinase 5 (MKK5); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase 4 (TAIR:AT1G51660.1); Has 130143 Blast hits to 128581 proteins in 4761 species: Archae - 120; Bacteria - 15121; Metazoa - 48301; Fungi - 12721; Plants - 32333; Viruses - 542; Other Eukaryotes - 21005 (source: NCBI BLink). & (gnl|cdd|35801 : 363.0) no description available & (gnl|cdd|47550 : 253.0) no description available & (q5qn75|m2k1_orysa : 230.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 942.0) & (original description: Putative MKK4, Description = Mitogen-activated protein kinase kinase 4, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben044scf00012999ctg007_3728-5930' '(at1g53570 : 251.0) MEK kinase (MAP3Ka); mitogen-activated protein kinase kinase kinase 3 (MAP3KA); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Mitogen activated protein kinase kinase kinase 3 (InterPro:IPR015748), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G63700.1). & (gnl|cdd|35419 : 216.0) no description available & (gnl|cdd|47550 : 192.0) no description available & (q5qn75|m2k1_orysa : 109.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 502.0) & (original description: Putative ANP1, Description = Mitogen-activated protein kinase kinase kinase 2, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben044scf00016165ctg009_1-1950' '(at3g45640 : 166.0) Encodes a mitogen-activated kinase whose mRNA levels increase in response to touch, cold, salinity stress and chitin oligomers.Also functions in ovule development. Heterozygous MPK3 mutants in a homozygous MPK6 background are female sterile due to defects in integument development. MPK3 can be dephosphorylated by MKP2 in vitro.; mitogen-activated protein kinase 3 (MPK3); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: MAP kinase 6 (TAIR:AT2G43790.1); Has 124285 Blast hits to 122929 proteins in 4636 species: Archae - 100; Bacteria - 13249; Metazoa - 47024; Fungi - 12588; Plants - 30092; Viruses - 485; Other Eukaryotes - 20747 (source: NCBI BLink). & (q40532|ntf4_tobac : 151.0) Mitogen-activated protein kinase homolog NTF4 (EC 2.7.11.24) (P45) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35879 : 107.0) no description available & (reliability: 332.0) & (original description: Putative mpkb, Description = Mitogen-activated protein kinase, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben044scf00020459ctg005_2523-9647' '(at1g73670 : 657.0) member of MAP Kinase; MAP kinase 15 (MPK15); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18150.3); Has 118424 Blast hits to 117259 proteins in 3821 species: Archae - 110; Bacteria - 13457; Metazoa - 43793; Fungi - 12258; Plants - 28693; Viruses - 571; Other Eukaryotes - 19542 (source: NCBI BLink). & (q5z9j0|mpk12_orysa : 640.0) Mitogen-activated protein kinase 12 (EC 2.7.11.24) (MAP kinase 12) (OsBWMK1) (Blast- and wound-induced MAP kinase 1) (MAP kinase 1) (OsMAPK1) - Oryza sativa (Rice) & (gnl|cdd|35879 : 456.0) no description available & (gnl|cdd|29142 : 258.0) no description available & (reliability: 1314.0) & (original description: Putative MPK11, Description = MAP kinase, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben044scf00023028ctg001_8700-12452' '(at1g59580 : 184.0) encodes a mitogen-activated kinase involved in innate immunity; mitogen-activated protein kinase homolog 2 (MPK2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase 1 (TAIR:AT1G10210.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q40517|ntf3_tobac : 184.0) Mitogen-activated protein kinase homolog NTF3 (EC 2.7.11.24) (P43) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35879 : 163.0) no description available & (gnl|cdd|47550 : 132.0) no description available & (reliability: 368.0) & (original description: Putative mpkb, Description = Mitogen-activated protein kinase, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben044scf00024903ctg001_3346-8076' '(at5g66850 : 279.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 5 (MAPKKK5); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G63700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35419 : 177.0) no description available & (gnl|cdd|47550 : 176.0) no description available & (q6x4a2|cipk1_orysa : 88.6) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 558.0) & (original description: Putative MAP3KA, Description = Mitogen-activated protein kinase kinase kinase 2, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben044scf00026059ctg004_1-6047' '(q5zci1|mpk10_orysa : 811.0) Mitogen-activated protein kinase 10 (EC 2.7.11.24) (MAP kinase 10) - Oryza sativa (Rice) & (at2g42880 : 802.0) member of MAP Kinase; MAP kinase 20 (MPK20); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: MAP kinase 19 (TAIR:AT3G14720.1); Has 119531 Blast hits to 118315 proteins in 3667 species: Archae - 102; Bacteria - 13281; Metazoa - 43923; Fungi - 12334; Plants - 29390; Viruses - 579; Other Eukaryotes - 19922 (source: NCBI BLink). & (gnl|cdd|35879 : 488.0) no description available & (gnl|cdd|29142 : 265.0) no description available & (reliability: 1604.0) & (original description: Putative MPK10, Description = Mitogen-activated protein kinase 10, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben044scf00031309ctg003_1381-7857' '(at5g58350 : 606.0) Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.; with no lysine (K) kinase 4 (WNK4); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 5 (TAIR:AT3G51630.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35804 : 553.0) no description available & (gnl|cdd|47550 : 196.0) no description available & (q75kk8|mpk14_orysa : 83.2) Mitogen-activated protein kinase 14 (EC 2.7.11.24) (MAP kinase 14) - Oryza sativa (Rice) & (reliability: 1212.0) & (original description: Putative oipk, Description = Mitogen-activated protein kinase, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben044scf00039152ctg005_10064-17460' '(at1g73660 : 632.0) Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance.; protein tyrosine kinase family protein; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Ubiquitin interacting motif (InterPro:IPR003903), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18160.1); Has 126827 Blast hits to 124278 proteins in 4857 species: Archae - 98; Bacteria - 13376; Metazoa - 48156; Fungi - 11388; Plants - 33654; Viruses - 503; Other Eukaryotes - 19652 (source: NCBI BLink). & (reliability: 1186.0) & (original description: Putative Os06g0232100, Description = Os06g0232100 protein, PFAM = PF14381)' T '30.6' 'signalling.MAP kinases' 'niben044scf00042695ctg000_1315-8921' '(q40517|ntf3_tobac : 731.0) Mitogen-activated protein kinase homolog NTF3 (EC 2.7.11.24) (P43) - Nicotiana tabacum (Common tobacco) & (at1g10210 : 642.0) Encodes ATMPK1.; mitogen-activated protein kinase 1 (ATMPK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase homolog 2 (TAIR:AT1G59580.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35879 : 512.0) no description available & (gnl|cdd|29142 : 267.0) no description available & (reliability: 1284.0) & (original description: Putative NTF3, Description = Mitogen-activated protein kinase homolog NTF3, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben044scf00048655ctg006_1592-11054' '(at4g01370 : 691.0) Encodes a nuclear and cytoplasmically localized MAP kinase involved in mediating responses to pathogens. Its substrates include MKS1 and probably MAP65-1.The MAP65-1 interaction is involved in mediating cortical microtuble organization.; MAP kinase 4 (MPK4); FUNCTIONS IN: MAP kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), JNK MAP kinase (InterPro:IPR008351), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: MAP kinase 11 (TAIR:AT1G01560.2); Has 123445 Blast hits to 122024 proteins in 4656 species: Archae - 100; Bacteria - 13145; Metazoa - 47072; Fungi - 12439; Plants - 29862; Viruses - 477; Other Eukaryotes - 20350 (source: NCBI BLink). & (q40353|mmk2_medsa : 687.0) Mitogen-activated protein kinase homolog MMK2 (EC 2.7.11.24) - Medicago sativa (Alfalfa) & (gnl|cdd|35879 : 536.0) no description available & (gnl|cdd|29142 : 273.0) no description available & (reliability: 1382.0) & (original description: Putative MPK4, Description = Mitogen-activated protein kinase 4, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben044scf00055601ctg002_1520-6135' '(at3g45640 : 648.0) Encodes a mitogen-activated kinase whose mRNA levels increase in response to touch, cold, salinity stress and chitin oligomers.Also functions in ovule development. Heterozygous MPK3 mutants in a homozygous MPK6 background are female sterile due to defects in integument development. MPK3 can be dephosphorylated by MKP2 in vitro.; mitogen-activated protein kinase 3 (MPK3); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: MAP kinase 6 (TAIR:AT2G43790.1); Has 124285 Blast hits to 122929 proteins in 4636 species: Archae - 100; Bacteria - 13249; Metazoa - 47024; Fungi - 12588; Plants - 30092; Viruses - 485; Other Eukaryotes - 20747 (source: NCBI BLink). & (q40532|ntf4_tobac : 589.0) Mitogen-activated protein kinase homolog NTF4 (EC 2.7.11.24) (P45) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35879 : 491.0) no description available & (gnl|cdd|29142 : 254.0) no description available & (reliability: 1296.0) & (original description: Putative MPK3, Description = Mitogen-activated protein kinase 3, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben044scf00057089ctg004_5278-11668' '(gnl|cdd|35804 : 555.0) no description available & (at3g18750 : 521.0) Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.; with no lysine (K) kinase 6 (WNK6); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G49160.2). & (gnl|cdd|47550 : 207.0) no description available & (q5qn75|m2k1_orysa : 84.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 966.0) & (original description: Putative WNK4, Description = Probable serine/threonine-protein kinase WNK4, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf00219_305389-319917' '(at5g66850 : 439.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 5 (MAPKKK5); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G63700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35419 : 290.0) no description available & (gnl|cdd|47550 : 267.0) no description available & (q6x4a2|cipk1_orysa : 109.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 878.0) & (original description: Putative BnaC02g44030D, Description = BnaC02g44030D protein, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf00338_962843-971722' '(at5g40440 : 847.0) encodes a mitogen-activated protein kinase kinase; mitogen-activated protein kinase kinase 3 (MKK3); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: MAP kinase kinase 6 (TAIR:AT5G56580.1); Has 122843 Blast hits to 121436 proteins in 4056 species: Archae - 133; Bacteria - 13736; Metazoa - 45702; Fungi - 12099; Plants - 30883; Viruses - 510; Other Eukaryotes - 19780 (source: NCBI BLink). & (gnl|cdd|35801 : 353.0) no description available & (q5qn75|m2k1_orysa : 247.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (gnl|cdd|29142 : 239.0) no description available & (reliability: 1694.0) & (original description: Putative MKK3, Description = Mitogen-activated protein kinase kinase 3, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf00421_127484-132595' '(at4g01370 : 671.0) Encodes a nuclear and cytoplasmically localized MAP kinase involved in mediating responses to pathogens. Its substrates include MKS1 and probably MAP65-1.The MAP65-1 interaction is involved in mediating cortical microtuble organization.; MAP kinase 4 (MPK4); FUNCTIONS IN: MAP kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), JNK MAP kinase (InterPro:IPR008351), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: MAP kinase 11 (TAIR:AT1G01560.2); Has 123445 Blast hits to 122024 proteins in 4656 species: Archae - 100; Bacteria - 13145; Metazoa - 47072; Fungi - 12439; Plants - 29862; Viruses - 477; Other Eukaryotes - 20350 (source: NCBI BLink). & (q40353|mmk2_medsa : 662.0) Mitogen-activated protein kinase homolog MMK2 (EC 2.7.11.24) - Medicago sativa (Alfalfa) & (gnl|cdd|35879 : 526.0) no description available & (gnl|cdd|29142 : 268.0) no description available & (reliability: 1342.0) & (original description: Putative MPK4, Description = Mitogen-activated protein kinase 4, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf00448_491295-494329' '(at5g55090 : 318.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 15 (MAPKKK15); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 16 (TAIR:AT4G26890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35419 : 288.0) no description available & (gnl|cdd|29142 : 242.0) no description available & (q5qn75|m2k1_orysa : 117.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 588.0) & (original description: Putative BnaC04g12300D, Description = BnaC04g12300D protein, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf00520_1239411-1242655' '(at5g55090 : 320.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 15 (MAPKKK15); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 16 (TAIR:AT4G26890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35419 : 284.0) no description available & (gnl|cdd|29142 : 238.0) no description available & (q5qn75|m2k1_orysa : 110.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 612.0) & (original description: Putative MAPKKK17, Description = Mitogen-activated protein kinase kinase kinase 17, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf00595_201016-208720' '(at1g63700 : 702.0) Member of MEKK subfamily, a component of the stomatal development regulatory pathway. Mutations in this locus result in embryo lethality.; YODA (YDA); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: stomatal complex morphogenesis, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 3 (TAIR:AT1G53570.1); Has 133707 Blast hits to 131404 proteins in 4998 species: Archae - 148; Bacteria - 15191; Metazoa - 50613; Fungi - 12908; Plants - 32496; Viruses - 572; Other Eukaryotes - 21779 (source: NCBI BLink). & (gnl|cdd|35419 : 311.0) no description available & (gnl|cdd|29142 : 297.0) no description available & (q6x4a2|cipk1_orysa : 139.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1404.0) & (original description: Putative YDA, Description = Mitogen-activated protein kinase kinase kinase YODA, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf00626_18709-26362' '(at1g63700 : 718.0) Member of MEKK subfamily, a component of the stomatal development regulatory pathway. Mutations in this locus result in embryo lethality.; YODA (YDA); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: stomatal complex morphogenesis, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 3 (TAIR:AT1G53570.1); Has 133707 Blast hits to 131404 proteins in 4998 species: Archae - 148; Bacteria - 15191; Metazoa - 50613; Fungi - 12908; Plants - 32496; Viruses - 572; Other Eukaryotes - 21779 (source: NCBI BLink). & (gnl|cdd|35419 : 310.0) no description available & (gnl|cdd|29142 : 295.0) no description available & (q6x4a2|cipk1_orysa : 133.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1436.0) & (original description: Putative YDA, Description = Mitogen-activated protein kinase kinase kinase 2, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf00741_195801-205189' '(at4g23050 : 520.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity, signal transducer activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT5G49470.3); Has 125163 Blast hits to 123569 proteins in 4990 species: Archae - 182; Bacteria - 13357; Metazoa - 47772; Fungi - 11074; Plants - 33184; Viruses - 511; Other Eukaryotes - 19083 (source: NCBI BLink). & (gnl|cdd|35413 : 296.0) no description available & (gnl|cdd|87344 : 235.0) no description available & (o24585|cri4_maize : 112.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 1040.0) & (original description: Putative CTR1, Description = Serine/threonine-protein kinase CTR1, PFAM = PF07714;PF13426)' T '30.6' 'signalling.MAP kinases' 'niben101scf00747_1344618-1347503' '(at3g21220 : 343.0) Encodes a mitogen-activated kinase kinase, dual specific protein kinase that is expressed in vegetative tissues and floral buds. Involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK4.In plants with both MKK5 and MKK6 levels reduced by RNAi plants, floral organs do not abscise suggestion a role for both proteins in mediating floral organ abscission.; MAP kinase kinase 5 (MKK5); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase 4 (TAIR:AT1G51660.1); Has 130143 Blast hits to 128581 proteins in 4761 species: Archae - 120; Bacteria - 15121; Metazoa - 48301; Fungi - 12721; Plants - 32333; Viruses - 542; Other Eukaryotes - 21005 (source: NCBI BLink). & (gnl|cdd|35801 : 306.0) no description available & (gnl|cdd|29142 : 231.0) no description available & (q5qn75|m2k1_orysa : 203.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 686.0) & (original description: Putative MKK9, Description = Mitogen-activated protein kinase kinase 9, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf00961_180988-184642' '(at5g11620 : 144.0) SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-related; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, SWIM-type (InterPro:IPR007527), Zinc finger, RING-type (InterPro:IPR001841); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative BnaC09g44980D, Description = BnaC09g44980D protein, PFAM = PF04434;PF13639)' T '30.6' 'signalling.MAP kinases' 'niben101scf00990_228676-251514' '(at5g56580 : 567.0) Encodes a member of the MAP Kinase Kinase family of proteins. It can phosphorylate MPK12 in vitro and it can be dephosphorylated by MKP2 in vitro.; MAP kinase kinase 6 (MKK6); FUNCTIONS IN: MAP kinase kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: MAP kinase kinase 2 (TAIR:AT4G29810.1); Has 125172 Blast hits to 123800 proteins in 4446 species: Archae - 151; Bacteria - 14363; Metazoa - 46867; Fungi - 12279; Plants - 30893; Viruses - 513; Other Eukaryotes - 20106 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 521.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (gnl|cdd|35801 : 425.0) no description available & (gnl|cdd|47550 : 244.0) no description available & (reliability: 1134.0) & (original description: Putative nqk1, Description = NQK1 MAPKK, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf01022_284472-295221' '(at5g49470 : 837.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT1G67890.1). & (gnl|cdd|35413 : 332.0) no description available & (gnl|cdd|87344 : 258.0) no description available & (q8l4h4|nork_medtr : 120.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1642.0) & (original description: Putative At5g49470, Description = PAS domain-containing protein tyrosine kinase, PFAM = PF00989;PF07714)' T '30.6' 'signalling.MAP kinases' 'niben101scf01022_326128-382418' '(at5g49470 : 798.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT1G67890.1). & (gnl|cdd|35413 : 332.0) no description available & (gnl|cdd|87344 : 258.0) no description available & (q8l4h4|nork_medtr : 116.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1556.0) & (original description: Putative CTR1, Description = Serine/threonine-protein kinase CTR1, PFAM = PF13426;PF07714)' T '30.6' 'signalling.MAP kinases' 'niben101scf01056_301936-304897' '(at5g11620 : 172.0) SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-related; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, SWIM-type (InterPro:IPR007527), Zinc finger, RING-type (InterPro:IPR001841); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative BnaC09g44980D, Description = BnaC09g44980D protein, PFAM = PF04434;PF13639)' T '30.6' 'signalling.MAP kinases' 'niben101scf01111_454032-458693' '(at4g23050 : 345.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity, signal transducer activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT5G49470.3); Has 125163 Blast hits to 123569 proteins in 4990 species: Archae - 182; Bacteria - 13357; Metazoa - 47772; Fungi - 11074; Plants - 33184; Viruses - 511; Other Eukaryotes - 19083 (source: NCBI BLink). & (gnl|cdd|35413 : 249.0) no description available & (gnl|cdd|87344 : 212.0) no description available & (q8lkz1|nork_pea : 106.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 690.0) & (original description: Putative CTR1, Description = Serine/threonine-protein kinase CTR1, PFAM = PF07714)' T '30.6' 'signalling.MAP kinases' 'niben101scf01181_323869-340158' '(at1g73660 : 527.0) Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance.; protein tyrosine kinase family protein; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Ubiquitin interacting motif (InterPro:IPR003903), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18160.1); Has 126827 Blast hits to 124278 proteins in 4857 species: Archae - 98; Bacteria - 13376; Metazoa - 48156; Fungi - 11388; Plants - 33654; Viruses - 503; Other Eukaryotes - 19652 (source: NCBI BLink). & (gnl|cdd|35413 : 327.0) no description available & (gnl|cdd|87344 : 251.0) no description available & (q8lpb4|pskr_dauca : 101.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1002.0) & (original description: Putative MAPK, Description = Mitogen-activated protein kinase, PFAM = PF07714;PF14381)' T '30.6' 'signalling.MAP kinases' 'niben101scf01181_336754-339539' '(at1g73660 : 176.0) Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance.; protein tyrosine kinase family protein; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Ubiquitin interacting motif (InterPro:IPR003903), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18160.1); Has 126827 Blast hits to 124278 proteins in 4857 species: Archae - 98; Bacteria - 13376; Metazoa - 48156; Fungi - 11388; Plants - 33654; Viruses - 503; Other Eukaryotes - 19652 (source: NCBI BLink). & (gnl|cdd|35413 : 126.0) no description available & (gnl|cdd|87344 : 97.9) no description available & (reliability: 332.0) & (original description: Putative Sb04g007765, Description = Putative uncharacterized protein Sb04g007765, PFAM = PF07714)' T '30.6' 'signalling.MAP kinases' 'niben101scf01222_286199-295053' '(at1g73670 : 617.0) member of MAP Kinase; MAP kinase 15 (MPK15); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18150.3); Has 118424 Blast hits to 117259 proteins in 3821 species: Archae - 110; Bacteria - 13457; Metazoa - 43793; Fungi - 12258; Plants - 28693; Viruses - 571; Other Eukaryotes - 19542 (source: NCBI BLink). & (q5z9j0|mpk12_orysa : 605.0) Mitogen-activated protein kinase 12 (EC 2.7.11.24) (MAP kinase 12) (OsBWMK1) (Blast- and wound-induced MAP kinase 1) (MAP kinase 1) (OsMAPK1) - Oryza sativa (Rice) & (gnl|cdd|35879 : 449.0) no description available & (gnl|cdd|29142 : 253.0) no description available & (reliability: 1234.0) & (original description: Putative MPK9, Description = Mitogen-activated protein kinase 9, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf01249_449344-452318' '(gnl|cdd|35801 : 385.0) no description available & (at1g73500 : 374.0) member of MAP Kinase Kinase family. Autophosphorylates and also phosphorylates MPK3 and MPK6. Independently involved in ethylene and calmalexin biosynthesis. Induces transcription of ACS2, ACS6, ERF1, ERF2, ERF5, ERF6, CYP79B2, CYP79B3, CYP71A13 and PAD3.; MAP kinase kinase 9 (MKK9); FUNCTIONS IN: protein kinase activator activity, MAP kinase kinase activity, kinase activity; INVOLVED IN: in 7 processes; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: MAP kinase kinase 7 (TAIR:AT1G18350.1); Has 126854 Blast hits to 125581 proteins in 4823 species: Archae - 172; Bacteria - 14892; Metazoa - 47012; Fungi - 12114; Plants - 31822; Viruses - 500; Other Eukaryotes - 20342 (source: NCBI BLink). & (gnl|cdd|29142 : 248.0) no description available & (q5qn75|m2k1_orysa : 209.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 748.0) & (original description: Putative MKK9, Description = Mitogen-activated protein kinase kinase 9, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf01283_279554-282672' '(at3g21220 : 467.0) Encodes a mitogen-activated kinase kinase, dual specific protein kinase that is expressed in vegetative tissues and floral buds. Involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK4.In plants with both MKK5 and MKK6 levels reduced by RNAi plants, floral organs do not abscise suggestion a role for both proteins in mediating floral organ abscission.; MAP kinase kinase 5 (MKK5); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase 4 (TAIR:AT1G51660.1); Has 130143 Blast hits to 128581 proteins in 4761 species: Archae - 120; Bacteria - 15121; Metazoa - 48301; Fungi - 12721; Plants - 32333; Viruses - 542; Other Eukaryotes - 21005 (source: NCBI BLink). & (gnl|cdd|35801 : 359.0) no description available & (gnl|cdd|47550 : 249.0) no description available & (q5qn75|m2k1_orysa : 225.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 934.0) & (original description: Putative MKK4, Description = Mitogen-activated protein kinase kinase 4, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf01290_231422-241865' '(at5g58350 : 601.0) Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.; with no lysine (K) kinase 4 (WNK4); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 5 (TAIR:AT3G51630.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35804 : 562.0) no description available & (gnl|cdd|47550 : 198.0) no description available & (q5qn75|m2k1_orysa : 83.6) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1202.0) & (original description: Putative oipk, Description = Mitogen-activated protein kinase, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf01414_88188-94847' '(at2g42880 : 805.0) member of MAP Kinase; MAP kinase 20 (MPK20); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: MAP kinase 19 (TAIR:AT3G14720.1); Has 119531 Blast hits to 118315 proteins in 3667 species: Archae - 102; Bacteria - 13281; Metazoa - 43923; Fungi - 12334; Plants - 29390; Viruses - 579; Other Eukaryotes - 19922 (source: NCBI BLink). & (q5zci1|mpk10_orysa : 803.0) Mitogen-activated protein kinase 10 (EC 2.7.11.24) (MAP kinase 10) - Oryza sativa (Rice) & (gnl|cdd|35879 : 485.0) no description available & (gnl|cdd|29142 : 263.0) no description available & (reliability: 1610.0) & (original description: Putative MPK10, Description = Mitogen-activated protein kinase 10, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf01587_270453-293317' '(at3g13530 : 1798.0) MAP3K epsilon protein kinase 1 is functionally redundant with MAP3Ke2. Required for pollen development but not essential. map3ke1;map3ke2 double-mutant pollen grains develop plasma membrane irregularities following pollen mitosis I. Localized primarily in the plasma membrane. Expressed in leaf trichomes, root columella cells and developing ovules.; mitogen-activated protein kinase kinase kinase 7 (MAPKKK7); FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: plasma membrane organization, pollen development; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: ovule developmental stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 6 (TAIR:AT3G07980.1); Has 137235 Blast hits to 134768 proteins in 5401 species: Archae - 190; Bacteria - 15422; Metazoa - 52001; Fungi - 13364; Plants - 33616; Viruses - 670; Other Eukaryotes - 21972 (source: NCBI BLink). & (gnl|cdd|29142 : 281.0) no description available & (gnl|cdd|35419 : 278.0) no description available & (q6x4a2|cipk1_orysa : 128.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 3596.0) & (original description: Putative M3KE1, Description = MAP3K epsilon protein kinase 1, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf01655_94888-100661' '(q40353|mmk2_medsa : 654.0) Mitogen-activated protein kinase homolog MMK2 (EC 2.7.11.24) - Medicago sativa (Alfalfa) & (at4g01370 : 651.0) Encodes a nuclear and cytoplasmically localized MAP kinase involved in mediating responses to pathogens. Its substrates include MKS1 and probably MAP65-1.The MAP65-1 interaction is involved in mediating cortical microtuble organization.; MAP kinase 4 (MPK4); FUNCTIONS IN: MAP kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), JNK MAP kinase (InterPro:IPR008351), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: MAP kinase 11 (TAIR:AT1G01560.2); Has 123445 Blast hits to 122024 proteins in 4656 species: Archae - 100; Bacteria - 13145; Metazoa - 47072; Fungi - 12439; Plants - 29862; Viruses - 477; Other Eukaryotes - 20350 (source: NCBI BLink). & (gnl|cdd|35879 : 507.0) no description available & (gnl|cdd|29142 : 265.0) no description available & (reliability: 1302.0) & (original description: Putative MMK2, Description = Mitogen-activated protein kinase homolog MMK2, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf01802_78941-84623' '(at4g36945 : 470.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phospholipase C activity, phosphoric diester hydrolase activity; INVOLVED IN: intracellular signaling pathway, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT3G19310.1); Has 486 Blast hits to 483 proteins in 111 species: Archae - 0; Bacteria - 90; Metazoa - 8; Fungi - 169; Plants - 156; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 936.0) & (original description: Putative LjNUF, Description = Putative uncharacterized protein LjNUF, PFAM = )' T '30.6' 'signalling.MAP kinases' 'niben101scf01892_230799-237850' '(at3g14720 : 730.0) member of MAP Kinase; MAP kinase 19 (MPK19); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase 18 (TAIR:AT1G53510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5zci1|mpk10_orysa : 697.0) Mitogen-activated protein kinase 10 (EC 2.7.11.24) (MAP kinase 10) - Oryza sativa (Rice) & (gnl|cdd|35879 : 457.0) no description available & (gnl|cdd|29142 : 253.0) no description available & (reliability: 1460.0) & (original description: Putative MPK19, Description = Mitogen-activated protein kinase 19, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf01931_748085-753650' '(q40531|ntf6_tobac : 751.0) Mitogen-activated protein kinase homolog NTF6 (EC 2.7.11.24) (P43) - Nicotiana tabacum (Common tobacco) & (at4g01370 : 591.0) Encodes a nuclear and cytoplasmically localized MAP kinase involved in mediating responses to pathogens. Its substrates include MKS1 and probably MAP65-1.The MAP65-1 interaction is involved in mediating cortical microtuble organization.; MAP kinase 4 (MPK4); FUNCTIONS IN: MAP kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), JNK MAP kinase (InterPro:IPR008351), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: MAP kinase 11 (TAIR:AT1G01560.2); Has 123445 Blast hits to 122024 proteins in 4656 species: Archae - 100; Bacteria - 13145; Metazoa - 47072; Fungi - 12439; Plants - 29862; Viruses - 477; Other Eukaryotes - 20350 (source: NCBI BLink). & (gnl|cdd|35879 : 504.0) no description available & (gnl|cdd|29142 : 266.0) no description available & (reliability: 1182.0) & (original description: Putative NTF6, Description = Mitogen-activated protein kinase homolog NTF6, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf01983_406279-412947' '(at3g14720 : 790.0) member of MAP Kinase; MAP kinase 19 (MPK19); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase 18 (TAIR:AT1G53510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5sn53|mpk8_orysa : 718.0) Mitogen-activated protein kinase 8 (EC 2.7.11.24) (MAP kinase 8) (OsWJUMK1) (Wound- and JA-uninducible MAP kinase 1) - Oryza sativa (Rice) & (gnl|cdd|35879 : 468.0) no description available & (gnl|cdd|29142 : 262.0) no description available & (reliability: 1580.0) & (original description: Putative MPK19, Description = Mitogen-activated protein kinase 19, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf02171_91193-97136' '(at3g45640 : 642.0) Encodes a mitogen-activated kinase whose mRNA levels increase in response to touch, cold, salinity stress and chitin oligomers.Also functions in ovule development. Heterozygous MPK3 mutants in a homozygous MPK6 background are female sterile due to defects in integument development. MPK3 can be dephosphorylated by MKP2 in vitro.; mitogen-activated protein kinase 3 (MPK3); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: MAP kinase 6 (TAIR:AT2G43790.1); Has 124285 Blast hits to 122929 proteins in 4636 species: Archae - 100; Bacteria - 13249; Metazoa - 47024; Fungi - 12588; Plants - 30092; Viruses - 485; Other Eukaryotes - 20747 (source: NCBI BLink). & (q40532|ntf4_tobac : 589.0) Mitogen-activated protein kinase homolog NTF4 (EC 2.7.11.24) (P45) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35879 : 503.0) no description available & (gnl|cdd|29142 : 260.0) no description available & (reliability: 1284.0) & (original description: Putative MPK3, Description = Mitogen-activated protein kinase 3, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf02318_38177-57160' '(at3g15220 : 757.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytoplasm, spindle; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G53165.2); Has 133641 Blast hits to 131568 proteins in 4406 species: Archae - 196; Bacteria - 15456; Metazoa - 49688; Fungi - 12950; Plants - 32844; Viruses - 666; Other Eukaryotes - 21841 (source: NCBI BLink). & (gnl|cdd|35422 : 494.0) no description available & (gnl|cdd|29142 : 300.0) no description available & (q5qn75|m2k1_orysa : 148.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1514.0) & (original description: Putative stk25a, Description = Zgc:92836, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf02368_13473-28393' '(at4g23050 : 281.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity, signal transducer activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT5G49470.3); Has 125163 Blast hits to 123569 proteins in 4990 species: Archae - 182; Bacteria - 13357; Metazoa - 47772; Fungi - 11074; Plants - 33184; Viruses - 511; Other Eukaryotes - 19083 (source: NCBI BLink). & (gnl|cdd|35413 : 213.0) no description available & (gnl|cdd|87344 : 154.0) no description available & (q8l4h4|nork_medtr : 91.3) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 562.0) & (original description: Putative ARK, Description = Serine/threonine-protein kinase CTR1, PFAM = PF07714)' T '30.6' 'signalling.MAP kinases' 'niben101scf02401_275974-284327' '(at1g73670 : 766.0) member of MAP Kinase; MAP kinase 15 (MPK15); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18150.3); Has 118424 Blast hits to 117259 proteins in 3821 species: Archae - 110; Bacteria - 13457; Metazoa - 43793; Fungi - 12258; Plants - 28693; Viruses - 571; Other Eukaryotes - 19542 (source: NCBI BLink). & (q5z9j0|mpk12_orysa : 738.0) Mitogen-activated protein kinase 12 (EC 2.7.11.24) (MAP kinase 12) (OsBWMK1) (Blast- and wound-induced MAP kinase 1) (MAP kinase 1) (OsMAPK1) - Oryza sativa (Rice) & (gnl|cdd|35879 : 480.0) no description available & (gnl|cdd|29142 : 260.0) no description available & (reliability: 1532.0) & (original description: Putative MPK9, Description = Mitogen-activated protein kinase 9, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf02480_317279-340812' '(at5g11850 : 822.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein tyrosine kinase family protein (TAIR:AT1G73660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 318.0) no description available & (gnl|cdd|87344 : 245.0) no description available & (q8lpb4|pskr_dauca : 112.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1644.0) & (original description: Putative MAPK, Description = Mitogen-activated protein kinase, PFAM = PF14381;PF07714)' T '30.6' 'signalling.MAP kinases' 'niben101scf02485_221465-229806' '(at5g19010 : 861.0) member of MAP Kinase; mitogen-activated protein kinase 16 (MPK16); FUNCTIONS IN: MAP kinase activity; INVOLVED IN: signal transduction; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: MAP kinase 9 (TAIR:AT3G18040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q75kk8|mpk14_orysa : 813.0) Mitogen-activated protein kinase 14 (EC 2.7.11.24) (MAP kinase 14) - Oryza sativa (Rice) & (gnl|cdd|35879 : 494.0) no description available & (gnl|cdd|29142 : 265.0) no description available & (reliability: 1722.0) & (original description: Putative MPK16, Description = Mitogen-activated protein kinase 16, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf02618_23199-33158' '(at1g73670 : 660.0) member of MAP Kinase; MAP kinase 15 (MPK15); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18150.3); Has 118424 Blast hits to 117259 proteins in 3821 species: Archae - 110; Bacteria - 13457; Metazoa - 43793; Fungi - 12258; Plants - 28693; Viruses - 571; Other Eukaryotes - 19542 (source: NCBI BLink). & (q53n72|mpk15_orysa : 644.0) Mitogen-activated protein kinase 15 (EC 2.7.11.24) (MAP kinase 15) - Oryza sativa (Rice) & (gnl|cdd|35879 : 473.0) no description available & (gnl|cdd|29142 : 269.0) no description available & (reliability: 1320.0) & (original description: Putative MPK11, Description = MAP kinase, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf02631_342694-345489' '(at1g49740 : 152.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phospholipase C activity, phosphoric diester hydrolase activity; INVOLVED IN: intracellular signaling pathway, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT3G19310.1); Has 451 Blast hits to 448 proteins in 104 species: Archae - 0; Bacteria - 81; Metazoa - 8; Fungi - 159; Plants - 152; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative LjNUF, Description = PI-PLC X domain-containing protein, PFAM = )' T '30.6' 'signalling.MAP kinases' 'niben101scf02790_323369-335631' '(at4g29810 : 505.0) encodes a MAP kinase kinase 2 that regulates MPK6 and MPK4 in response to cold and salt stresses. Co-expression with MEKK1 in protoplasts activated MKK2 activity, suggesting that MEKK1 may be a regulator of MKK2.; MAP kinase kinase 2 (MKK2); FUNCTIONS IN: MAP kinase kinase activity, kinase activity; INVOLVED IN: cold acclimation, MAPKKK cascade, response to salt stress, response to cold, defense response, incompatible interaction; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: MAP kinase/ ERK kinase 1 (TAIR:AT4G26070.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35801 : 423.0) no description available & (q5qn75|m2k1_orysa : 416.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (gnl|cdd|47550 : 256.0) no description available & (reliability: 1010.0) & (original description: Putative mek1, Description = MAP kinase kinase, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf03291_118051-139395' '(at5g49470 : 809.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT1G67890.1). & (gnl|cdd|35413 : 329.0) no description available & (gnl|cdd|87344 : 251.0) no description available & (q8l4h4|nork_medtr : 119.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1608.0) & (original description: Putative At5g49470, Description = PAS domain-containing protein tyrosine kinase, PFAM = PF07714;PF00989)' T '30.6' 'signalling.MAP kinases' 'niben101scf03307_45375-54751' '(at5g56580 : 496.0) Encodes a member of the MAP Kinase Kinase family of proteins. It can phosphorylate MPK12 in vitro and it can be dephosphorylated by MKP2 in vitro.; MAP kinase kinase 6 (MKK6); FUNCTIONS IN: MAP kinase kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: MAP kinase kinase 2 (TAIR:AT4G29810.1); Has 125172 Blast hits to 123800 proteins in 4446 species: Archae - 151; Bacteria - 14363; Metazoa - 46867; Fungi - 12279; Plants - 30893; Viruses - 513; Other Eukaryotes - 20106 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 458.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (gnl|cdd|35801 : 379.0) no description available & (gnl|cdd|47550 : 215.0) no description available & (reliability: 992.0) & (original description: Putative nqk1, Description = NQK1 MAPKK, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf03720_197815-205792' '(at1g67890 : 169.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, catalytic domain (InterPro:IPR000719), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT5G49470.3); Has 127928 Blast hits to 126175 proteins in 4896 species: Archae - 310; Bacteria - 16027; Metazoa - 47209; Fungi - 11347; Plants - 33277; Viruses - 520; Other Eukaryotes - 19238 (source: NCBI BLink). & (gnl|cdd|35413 : 114.0) no description available & (reliability: 338.0) & (original description: Putative Sb04g007765, Description = Putative uncharacterized protein Sb04g007765, PFAM = PF07714)' T '30.6' 'signalling.MAP kinases' 'niben101scf03761_80184-86589' '(gnl|cdd|35804 : 555.0) no description available & (at3g18750 : 521.0) Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.; with no lysine (K) kinase 6 (WNK6); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G49160.2). & (gnl|cdd|47550 : 206.0) no description available & (q5qn75|m2k1_orysa : 83.6) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 966.0) & (original description: Putative WNK4, Description = Probable serine/threonine-protein kinase WNK4, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf03906_311103-321947' '(at4g08500 : 376.0) Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301. Mediates cold, salt, cadmium and wounding stress signalling. Phosphorylates MEK1.; MAPK/ERK kinase kinase 1 (MEKK1); FUNCTIONS IN: protein binding, kinase binding, DNA binding, MAP kinase kinase kinase activity, kinase activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 9 (TAIR:AT4G08480.1); Has 132336 Blast hits to 130259 proteins in 4567 species: Archae - 142; Bacteria - 14700; Metazoa - 49430; Fungi - 12971; Plants - 32949; Viruses - 685; Other Eukaryotes - 21459 (source: NCBI BLink). & (gnl|cdd|35419 : 281.0) no description available & (gnl|cdd|29142 : 270.0) no description available & (q5qn75|m2k1_orysa : 127.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 752.0) & (original description: Putative MEKK1, Description = Mitogen-activated protein kinase kinase kinase 1, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf04003_399289-409493' '(at4g36945 : 471.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phospholipase C activity, phosphoric diester hydrolase activity; INVOLVED IN: intracellular signaling pathway, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT3G19310.1); Has 486 Blast hits to 483 proteins in 111 species: Archae - 0; Bacteria - 90; Metazoa - 8; Fungi - 169; Plants - 156; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 938.0) & (original description: Putative LjNUF, Description = Putative uncharacterized protein LjNUF, PFAM = )' T '30.6' 'signalling.MAP kinases' 'niben101scf04754_443171-446195' '(gnl|cdd|35804 : 357.0) no description available & (at3g18750 : 301.0) Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.; with no lysine (K) kinase 6 (WNK6); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G49160.2). & (gnl|cdd|29142 : 170.0) no description available & (reliability: 596.0) & (original description: Putative oipk, Description = WNK kinase, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf04783_41196-49666' '(at5g19010 : 870.0) member of MAP Kinase; mitogen-activated protein kinase 16 (MPK16); FUNCTIONS IN: MAP kinase activity; INVOLVED IN: signal transduction; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: MAP kinase 9 (TAIR:AT3G18040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q75kk8|mpk14_orysa : 818.0) Mitogen-activated protein kinase 14 (EC 2.7.11.24) (MAP kinase 14) - Oryza sativa (Rice) & (gnl|cdd|35879 : 494.0) no description available & (gnl|cdd|29142 : 263.0) no description available & (reliability: 1740.0) & (original description: Putative MPK16, Description = Mitogen-activated protein kinase 16, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf05363_471053-478368' '(at5g66850 : 422.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 5 (MAPKKK5); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G63700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35419 : 270.0) no description available & (gnl|cdd|29142 : 249.0) no description available & (p29619|cdc22_orysa : 101.0) Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Oryza sativa (Rice) & (reliability: 844.0) & (original description: Putative MAPKKK5, Description = Mitogen-activated protein kinase kinase kinase 5, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf05813_1034004-1040107' '(at5g66850 : 491.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 5 (MAPKKK5); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G63700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35419 : 296.0) no description available & (gnl|cdd|47550 : 268.0) no description available & (q5qn75|m2k1_orysa : 123.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 982.0) & (original description: Putative MAPKKKg, Description = Protein kinase, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf06186_587356-590379' '(at1g63700 : 236.0) Member of MEKK subfamily, a component of the stomatal development regulatory pathway. Mutations in this locus result in embryo lethality.; YODA (YDA); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: stomatal complex morphogenesis, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 3 (TAIR:AT1G53570.1); Has 133707 Blast hits to 131404 proteins in 4998 species: Archae - 148; Bacteria - 15191; Metazoa - 50613; Fungi - 12908; Plants - 32496; Viruses - 572; Other Eukaryotes - 21779 (source: NCBI BLink). & (gnl|cdd|35419 : 147.0) no description available & (gnl|cdd|47550 : 145.0) no description available & (q6x4a2|cipk1_orysa : 85.5) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 472.0) & (original description: Putative YDA, Description = Mitogen-activated protein kinase kinase kinase 2, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf06682_62909-71841' '(at5g66850 : 407.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 5 (MAPKKK5); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G63700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35419 : 256.0) no description available & (gnl|cdd|29142 : 237.0) no description available & (p29619|cdc22_orysa : 100.0) Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Oryza sativa (Rice) & (reliability: 814.0) & (original description: Putative YDA, Description = Mitogen-activated protein kinase kinase kinase 2, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf06772_131131-145964' '(at4g08500 : 422.0) Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301. Mediates cold, salt, cadmium and wounding stress signalling. Phosphorylates MEK1.; MAPK/ERK kinase kinase 1 (MEKK1); FUNCTIONS IN: protein binding, kinase binding, DNA binding, MAP kinase kinase kinase activity, kinase activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 9 (TAIR:AT4G08480.1); Has 132336 Blast hits to 130259 proteins in 4567 species: Archae - 142; Bacteria - 14700; Metazoa - 49430; Fungi - 12971; Plants - 32949; Viruses - 685; Other Eukaryotes - 21459 (source: NCBI BLink). & (gnl|cdd|35419 : 283.0) no description available & (gnl|cdd|29142 : 267.0) no description available & (q5qn75|m2k1_orysa : 124.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 844.0) & (original description: Putative MEKK1, Description = Mitogen-activated protein kinase kinase kinase 1, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf07276_20636-30660' '(q40532|ntf4_tobac : 767.0) Mitogen-activated protein kinase homolog NTF4 (EC 2.7.11.24) (P45) - Nicotiana tabacum (Common tobacco) & (at2g43790 : 674.0) Encodes a MAP kinase induced by pathogens, ethylene biosynthesis, oxidative stress and osmotic stress.Also involved in ovule development. Homozygous mutants in a MPK3 heterozygous background are female sterile due to defects in integument development.MPK6 appears to be associated with the microsomal compartment and may be involved in mediating secretory processes.; MAP kinase 6 (MPK6); FUNCTIONS IN: MAP kinase activity, kinase activity; INVOLVED IN: in 20 processes; LOCATED IN: trans-Golgi network, preprophase band, phragmoplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), JNK MAP kinase (InterPro:IPR008351), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase 3 (TAIR:AT3G45640.1); Has 124968 Blast hits to 123484 proteins in 4565 species: Archae - 94; Bacteria - 13025; Metazoa - 47222; Fungi - 12634; Plants - 30512; Viruses - 574; Other Eukaryotes - 20907 (source: NCBI BLink). & (gnl|cdd|35879 : 513.0) no description available & (gnl|cdd|29142 : 271.0) no description available & (reliability: 1348.0) & (original description: Putative MMK1, Description = Mitogen-activated protein kinase homolog MMK1, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf07278_220313-229074' '(at1g49740 : 541.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phospholipase C activity, phosphoric diester hydrolase activity; INVOLVED IN: intracellular signaling pathway, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT3G19310.1); Has 451 Blast hits to 448 proteins in 104 species: Archae - 0; Bacteria - 81; Metazoa - 8; Fungi - 159; Plants - 152; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (reliability: 1082.0) & (original description: Putative LjNUF, Description = Putative uncharacterized protein LjNUF, PFAM = )' T '30.6' 'signalling.MAP kinases' 'niben101scf07489_159975-166728' '(at5g66850 : 496.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 5 (MAPKKK5); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G63700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35419 : 293.0) no description available & (gnl|cdd|47550 : 268.0) no description available & (q5qn75|m2k1_orysa : 117.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 992.0) & (original description: Putative MAPKKKg, Description = Protein kinase, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf07576_492584-501280' '(at4g01370 : 691.0) Encodes a nuclear and cytoplasmically localized MAP kinase involved in mediating responses to pathogens. Its substrates include MKS1 and probably MAP65-1.The MAP65-1 interaction is involved in mediating cortical microtuble organization.; MAP kinase 4 (MPK4); FUNCTIONS IN: MAP kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), JNK MAP kinase (InterPro:IPR008351), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: MAP kinase 11 (TAIR:AT1G01560.2); Has 123445 Blast hits to 122024 proteins in 4656 species: Archae - 100; Bacteria - 13145; Metazoa - 47072; Fungi - 12439; Plants - 29862; Viruses - 477; Other Eukaryotes - 20350 (source: NCBI BLink). & (q40353|mmk2_medsa : 684.0) Mitogen-activated protein kinase homolog MMK2 (EC 2.7.11.24) - Medicago sativa (Alfalfa) & (gnl|cdd|35879 : 534.0) no description available & (gnl|cdd|29142 : 272.0) no description available & (reliability: 1382.0) & (original description: Putative MPK4, Description = Mitogen-activated protein kinase 4, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf08586_593221-608676' '(at1g73660 : 1033.0) Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance.; protein tyrosine kinase family protein; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Ubiquitin interacting motif (InterPro:IPR003903), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18160.1); Has 126827 Blast hits to 124278 proteins in 4857 species: Archae - 98; Bacteria - 13376; Metazoa - 48156; Fungi - 11388; Plants - 33654; Viruses - 503; Other Eukaryotes - 19652 (source: NCBI BLink). & (gnl|cdd|35413 : 335.0) no description available & (gnl|cdd|87344 : 257.0) no description available & (q8lpb4|pskr_dauca : 102.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1966.0) & (original description: Putative BnaA07g31020D, Description = BnaA07g31020D protein, PFAM = PF14381;PF07714)' T '30.6' 'signalling.MAP kinases' 'niben101scf08814_113754-121105' '(q40517|ntf3_tobac : 735.0) Mitogen-activated protein kinase homolog NTF3 (EC 2.7.11.24) (P43) - Nicotiana tabacum (Common tobacco) & (at1g10210 : 645.0) Encodes ATMPK1.; mitogen-activated protein kinase 1 (ATMPK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase homolog 2 (TAIR:AT1G59580.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35879 : 516.0) no description available & (gnl|cdd|29142 : 267.0) no description available & (reliability: 1290.0) & (original description: Putative NTF3, Description = Mitogen-activated protein kinase homolog NTF3, PFAM = PF00069;PF12330)' T '30.6' 'signalling.MAP kinases' 'niben101scf09063_65010-72150' '(at1g53570 : 527.0) MEK kinase (MAP3Ka); mitogen-activated protein kinase kinase kinase 3 (MAP3KA); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Mitogen activated protein kinase kinase kinase 3 (InterPro:IPR015748), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G63700.1). & (gnl|cdd|35419 : 312.0) no description available & (gnl|cdd|29142 : 297.0) no description available & (q6x4a2|cipk1_orysa : 139.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1054.0) & (original description: Putative MAPKKK, Description = Mitogen-activated protein kinase kinase kinase, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf10103_398947-404592' '(at4g29810 : 517.0) encodes a MAP kinase kinase 2 that regulates MPK6 and MPK4 in response to cold and salt stresses. Co-expression with MEKK1 in protoplasts activated MKK2 activity, suggesting that MEKK1 may be a regulator of MKK2.; MAP kinase kinase 2 (MKK2); FUNCTIONS IN: MAP kinase kinase activity, kinase activity; INVOLVED IN: cold acclimation, MAPKKK cascade, response to salt stress, response to cold, defense response, incompatible interaction; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: MAP kinase/ ERK kinase 1 (TAIR:AT4G26070.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 460.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (gnl|cdd|35801 : 432.0) no description available & (gnl|cdd|47550 : 262.0) no description available & (reliability: 1034.0) & (original description: Putative mek1, Description = MAP kinase kinase, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf10200_12023-21356' '(at3g18040 : 764.0) Encodes a protein with similarity to MAP kinases (MAPK9).Expressed preferentially in guard cells and appears to be involved in reactive oxygen species mediated ABA signaling.; MAP kinase 9 (MPK9); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: MAP kinase 15 (TAIR:AT1G73670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5z9j0|mpk12_orysa : 732.0) Mitogen-activated protein kinase 12 (EC 2.7.11.24) (MAP kinase 12) (OsBWMK1) (Blast- and wound-induced MAP kinase 1) (MAP kinase 1) (OsMAPK1) - Oryza sativa (Rice) & (gnl|cdd|35879 : 481.0) no description available & (gnl|cdd|29142 : 262.0) no description available & (reliability: 1528.0) & (original description: Putative MPK9, Description = Mitogen-activated protein kinase 9, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf12289_135867-138934' '(gnl|cdd|35419 : 278.0) no description available & (gnl|cdd|29142 : 243.0) no description available & (at5g55090 : 236.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 15 (MAPKKK15); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 16 (TAIR:AT4G26890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 121.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 440.0) & (original description: Putative BnaC08g12350D, Description = BnaC08g12350D protein, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf16132_18913-45079' '(at1g08720 : 705.0) enhanced disease resistance 1 (EDR1) confers resistance to powdery mildew disease caused by the fungus Erysiphe cichoracearum; ENHANCED DISEASE RESISTANCE 1 (EDR1); FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, MAP kinase kinase kinase activity, kinase activity; INVOLVED IN: in 7 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G11850.1); Has 120792 Blast hits to 119043 proteins in 4682 species: Archae - 98; Bacteria - 12672; Metazoa - 46002; Fungi - 10646; Plants - 32815; Viruses - 475; Other Eukaryotes - 18084 (source: NCBI BLink). & (gnl|cdd|35413 : 245.0) no description available & (gnl|cdd|29142 : 187.0) no description available & (o24585|cri4_maize : 91.7) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 1410.0) & (original description: Putative EDR1, Description = Serine/threonine-protein kinase EDR1, PFAM = PF14381;PF07714)' T '30.6' 'signalling.MAP kinases' 'niben101scf17398_93393-99812' '(at2g18170 : 647.0) MAP kinase 7 (MPK7); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase 14 (TAIR:AT4G36450.1); Has 121649 Blast hits to 120256 proteins in 4623 species: Archae - 97; Bacteria - 12437; Metazoa - 46483; Fungi - 12286; Plants - 29603; Viruses - 478; Other Eukaryotes - 20265 (source: NCBI BLink). & (q40517|ntf3_tobac : 640.0) Mitogen-activated protein kinase homolog NTF3 (EC 2.7.11.24) (P43) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35879 : 486.0) no description available & (gnl|cdd|29142 : 263.0) no description available & (reliability: 1294.0) & (original description: Putative MPK14, Description = Mitogen-activated protein kinase 14, PFAM = PF00069;PF12330)' T '30.6' 'signalling.MAP kinases' 'niben101scf17849_291669-314381' '(q40532|ntf4_tobac : 748.0) Mitogen-activated protein kinase homolog NTF4 (EC 2.7.11.24) (P45) - Nicotiana tabacum (Common tobacco) & (at2g43790 : 675.0) Encodes a MAP kinase induced by pathogens, ethylene biosynthesis, oxidative stress and osmotic stress.Also involved in ovule development. Homozygous mutants in a MPK3 heterozygous background are female sterile due to defects in integument development.MPK6 appears to be associated with the microsomal compartment and may be involved in mediating secretory processes.; MAP kinase 6 (MPK6); FUNCTIONS IN: MAP kinase activity, kinase activity; INVOLVED IN: in 20 processes; LOCATED IN: trans-Golgi network, preprophase band, phragmoplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), JNK MAP kinase (InterPro:IPR008351), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase 3 (TAIR:AT3G45640.1); Has 124968 Blast hits to 123484 proteins in 4565 species: Archae - 94; Bacteria - 13025; Metazoa - 47222; Fungi - 12634; Plants - 30512; Viruses - 574; Other Eukaryotes - 20907 (source: NCBI BLink). & (gnl|cdd|35879 : 507.0) no description available & (gnl|cdd|29142 : 263.0) no description available & (reliability: 1350.0) & (original description: Putative MMK1, Description = Mitogen-activated protein kinase homolog MMK1, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf20176_12659-22551' '(gnl|cdd|35804 : 556.0) no description available & (at5g58350 : 538.0) Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.; with no lysine (K) kinase 4 (WNK4); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 5 (TAIR:AT3G51630.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|47550 : 191.0) no description available & (reliability: 1076.0) & (original description: Putative oipk, Description = Mitogen-activated protein kinase, PFAM = PF00069)' T '30.6' 'signalling.MAP kinases' 'niben101scf32698_2171-8965' '(q40517|ntf3_tobac : 718.0) Mitogen-activated protein kinase homolog NTF3 (EC 2.7.11.24) (P43) - Nicotiana tabacum (Common tobacco) & (at1g10210 : 669.0) Encodes ATMPK1.; mitogen-activated protein kinase 1 (ATMPK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase homolog 2 (TAIR:AT1G59580.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35879 : 505.0) no description available & (gnl|cdd|29142 : 265.0) no description available & (reliability: 1338.0) & (original description: Putative NTF3, Description = Mitogen-activated protein kinase homolog NTF3, PFAM = PF00069)' T '30.7' 'signalling.14-3-3 proteins' 'nbv0.3scaffold95812_882-4138' '(o49998|1433f_tobac : 421.0) 14-3-3-like protein F - Nicotiana tabacum (Common tobacco) & (at1g78300 : 375.0) G-box binding factor GF14 omega encoding a 14-3-3 protein; general regulatory factor 2 (GRF2); FUNCTIONS IN: protein phosphorylated amino acid binding; INVOLVED IN: brassinosteroid mediated signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: GF14 protein phi chain (TAIR:AT1G35160.1); Has 2698 Blast hits to 2688 proteins in 383 species: Archae - 0; Bacteria - 0; Metazoa - 1259; Fungi - 318; Plants - 766; Viruses - 0; Other Eukaryotes - 355 (source: NCBI BLink). & (gnl|cdd|84639 : 370.0) no description available & (gnl|cdd|36059 : 325.0) no description available & (reliability: 750.0) & (original description: Putative fttB, Description = 14-3-3 protein epsilon, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'nbv0.5scaffold189_894052-904417' '(at1g26480 : 372.0) 14-3-3 protein GF14iota (grf12); general regulatory factor 12 (GRF12); FUNCTIONS IN: protein phosphorylated amino acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 9 (TAIR:AT2G42590.3); Has 2719 Blast hits to 2708 proteins in 388 species: Archae - 0; Bacteria - 8; Metazoa - 1259; Fungi - 334; Plants - 765; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink). & (gnl|cdd|84639 : 358.0) no description available & (p42654|1433b_vicfa : 343.0) 14-3-3-like protein B (VFA-1433B) - Vicia faba (Broad bean) & (gnl|cdd|36059 : 321.0) no description available & (reliability: 744.0) & (original description: Putative fttB, Description = 14-3-3 protein epsilon, PFAM = PF03141;PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'nbv0.5scaffold1515_307516-310809' '(o49998|1433f_tobac : 407.0) 14-3-3-like protein F - Nicotiana tabacum (Common tobacco) & (at1g78300 : 374.0) G-box binding factor GF14 omega encoding a 14-3-3 protein; general regulatory factor 2 (GRF2); FUNCTIONS IN: protein phosphorylated amino acid binding; INVOLVED IN: brassinosteroid mediated signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: GF14 protein phi chain (TAIR:AT1G35160.1); Has 2698 Blast hits to 2688 proteins in 383 species: Archae - 0; Bacteria - 0; Metazoa - 1259; Fungi - 318; Plants - 766; Viruses - 0; Other Eukaryotes - 355 (source: NCBI BLink). & (gnl|cdd|84639 : 362.0) no description available & (gnl|cdd|36059 : 322.0) no description available & (reliability: 748.0) & (original description: Putative fttB, Description = 14-3-3 protein epsilon, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'nbv0.5scaffold5211_13229-17845' '(o49997|1433e_tobac : 446.0) 14-3-3-like protein E - Nicotiana tabacum (Common tobacco) & (at5g38480 : 391.0) general regulatory factor, a 14-3-3 gene; general regulatory factor 3 (GRF3); FUNCTIONS IN: protein phosphorylated amino acid binding, ATP binding; LOCATED IN: mitochondrion, cell wall, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 7 (TAIR:AT3G02520.1); Has 2749 Blast hits to 2739 proteins in 391 species: Archae - 0; Bacteria - 6; Metazoa - 1263; Fungi - 337; Plants - 766; Viruses - 0; Other Eukaryotes - 377 (source: NCBI BLink). & (gnl|cdd|84639 : 380.0) no description available & (gnl|cdd|36059 : 343.0) no description available & (reliability: 782.0) & (original description: Putative GRF3, Description = 14-3-3-like protein GF14 psi, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'nbv0.5scaffold11425_1-2629' '(p93784|14335_soltu : 344.0) 14-3-3-like protein 16R - Solanum tuberosum (Potato) & (at1g78300 : 325.0) G-box binding factor GF14 omega encoding a 14-3-3 protein; general regulatory factor 2 (GRF2); FUNCTIONS IN: protein phosphorylated amino acid binding; INVOLVED IN: brassinosteroid mediated signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: GF14 protein phi chain (TAIR:AT1G35160.1); Has 2698 Blast hits to 2688 proteins in 383 species: Archae - 0; Bacteria - 0; Metazoa - 1259; Fungi - 318; Plants - 766; Viruses - 0; Other Eukaryotes - 355 (source: NCBI BLink). & (gnl|cdd|84639 : 309.0) no description available & (gnl|cdd|36059 : 268.0) no description available & (reliability: 650.0) & (original description: Putative fttB, Description = 14-3-3 protein epsilon, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben044scf00005441ctg019_41069-46027' '(q41246|1433_tobac : 388.0) 14-3-3-like protein - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84639 : 378.0) no description available & (at1g34760 : 360.0) Encodes a 14-3-3 protein. Binds H+-ATPase in response to blue light.; general regulatory factor 11 (GRF11); CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 12 (TAIR:AT1G26480.1); Has 2697 Blast hits to 2689 proteins in 382 species: Archae - 0; Bacteria - 0; Metazoa - 1262; Fungi - 298; Plants - 762; Viruses - 0; Other Eukaryotes - 375 (source: NCBI BLink). & (gnl|cdd|36059 : 352.0) no description available & (reliability: 720.0) & (original description: Putative GRF11, Description = 14-3-3-like protein GF14 omicron, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben044scf00005441ctg019_41111-44542' '(gnl|cdd|84639 : 262.0) no description available & (q41246|1433_tobac : 246.0) 14-3-3-like protein - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36059 : 246.0) no description available & (at1g22300 : 227.0) Encodes a 14-3-3 protein. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1.; general regulatory factor 10 (GRF10); FUNCTIONS IN: protein phosphorylated amino acid binding, ATP binding; INVOLVED IN: brassinosteroid mediated signaling pathway; LOCATED IN: mitochondrion, chloroplast stroma, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 11 (TAIR:AT1G34760.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative fttB, Description = 14-3-3 protein epsilon, PFAM = PF00244;PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben044scf00006901ctg001_6776-10053' '(p93784|14335_soltu : 440.0) 14-3-3-like protein 16R - Solanum tuberosum (Potato) & (at1g78300 : 407.0) G-box binding factor GF14 omega encoding a 14-3-3 protein; general regulatory factor 2 (GRF2); FUNCTIONS IN: protein phosphorylated amino acid binding; INVOLVED IN: brassinosteroid mediated signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: GF14 protein phi chain (TAIR:AT1G35160.1); Has 2698 Blast hits to 2688 proteins in 383 species: Archae - 0; Bacteria - 0; Metazoa - 1259; Fungi - 318; Plants - 766; Viruses - 0; Other Eukaryotes - 355 (source: NCBI BLink). & (gnl|cdd|84639 : 387.0) no description available & (gnl|cdd|36059 : 349.0) no description available & (reliability: 814.0) & (original description: Putative GRF2, Description = 14-3-3-like protein GF14 omega, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben044scf00011932ctg005_31062-37204' '(p42654|1433b_vicfa : 405.0) 14-3-3-like protein B (VFA-1433B) - Vicia faba (Broad bean) & (gnl|cdd|84639 : 390.0) no description available & (at2g42590 : 373.0) 14-3-3 gene. Binds calcium and displays induced structural changes.; general regulatory factor 9 (GRF9); FUNCTIONS IN: protein phosphorylated amino acid binding, calcium ion binding; LOCATED IN: chloroplast stroma, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 12 (TAIR:AT1G26480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36059 : 350.0) no description available & (reliability: 746.0) & (original description: Putative GRF9, Description = 14-3-3-like protein GF14 mu, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben044scf00013456ctg008_25058-31125' '(at1g26480 : 389.0) 14-3-3 protein GF14iota (grf12); general regulatory factor 12 (GRF12); FUNCTIONS IN: protein phosphorylated amino acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 9 (TAIR:AT2G42590.3); Has 2719 Blast hits to 2708 proteins in 388 species: Archae - 0; Bacteria - 8; Metazoa - 1259; Fungi - 334; Plants - 765; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink). & (gnl|cdd|84639 : 373.0) no description available & (q96453|1433d_soybn : 365.0) 14-3-3-like protein D (SGF14D) - Glycine max (Soybean) & (gnl|cdd|36059 : 345.0) no description available & (reliability: 778.0) & (original description: Putative GRF9, Description = 14-3-3-like protein GF14 mu, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben044scf00017559ctg015_17780-22590' '(q96451|1433b_soybn : 381.0) 14-3-3-like protein B (SGF14B) (Fragment) - Glycine max (Soybean) & (at5g65430 : 370.0) member of 14-3-3 proteins. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1; general regulatory factor 8 (GRF8); CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: G-box regulating factor 6 (TAIR:AT5G10450.3). & (gnl|cdd|84639 : 354.0) no description available & (gnl|cdd|36059 : 316.0) no description available & (reliability: 740.0) & (original description: Putative GRF8, Description = 14-3-3-like protein GF14 kappa, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben044scf00043433ctg001_47-5037' '(gnl|cdd|84639 : 361.0) no description available & (p42654|1433b_vicfa : 350.0) 14-3-3-like protein B (VFA-1433B) - Vicia faba (Broad bean) & (gnl|cdd|36059 : 323.0) no description available & (at1g34760 : 320.0) Encodes a 14-3-3 protein. Binds H+-ATPase in response to blue light.; general regulatory factor 11 (GRF11); CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 12 (TAIR:AT1G26480.1); Has 2697 Blast hits to 2689 proteins in 382 species: Archae - 0; Bacteria - 0; Metazoa - 1262; Fungi - 298; Plants - 762; Viruses - 0; Other Eukaryotes - 375 (source: NCBI BLink). & (reliability: 640.0) & (original description: Putative YWHAG, Description = 14-3-3 protein gamma, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben101scf00477_53421-58947' '(q41246|1433_tobac : 420.0) 14-3-3-like protein - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84639 : 380.0) no description available & (at1g34760 : 377.0) Encodes a 14-3-3 protein. Binds H+-ATPase in response to blue light.; general regulatory factor 11 (GRF11); CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 12 (TAIR:AT1G26480.1); Has 2697 Blast hits to 2689 proteins in 382 species: Archae - 0; Bacteria - 0; Metazoa - 1262; Fungi - 298; Plants - 762; Viruses - 0; Other Eukaryotes - 375 (source: NCBI BLink). & (gnl|cdd|36059 : 355.0) no description available & (reliability: 754.0) & (original description: Putative GRF11, Description = 14-3-3-like protein GF14 omicron, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben101scf00477_54771-58393' '(q41246|1433_tobac : 276.0) 14-3-3-like protein - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84639 : 261.0) no description available & (gnl|cdd|36059 : 248.0) no description available & (at2g42590 : 246.0) 14-3-3 gene. Binds calcium and displays induced structural changes.; general regulatory factor 9 (GRF9); FUNCTIONS IN: protein phosphorylated amino acid binding, calcium ion binding; LOCATED IN: chloroplast stroma, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 12 (TAIR:AT1G26480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative YWHAB, Description = 14-3-3 protein beta/alpha, PFAM = PF00244;PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben101scf00635_732915-847079' '(at1g26480 : 372.0) 14-3-3 protein GF14iota (grf12); general regulatory factor 12 (GRF12); FUNCTIONS IN: protein phosphorylated amino acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 9 (TAIR:AT2G42590.3); Has 2719 Blast hits to 2708 proteins in 388 species: Archae - 0; Bacteria - 8; Metazoa - 1259; Fungi - 334; Plants - 765; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink). & (gnl|cdd|84639 : 370.0) no description available & (q96453|1433d_soybn : 357.0) 14-3-3-like protein D (SGF14D) - Glycine max (Soybean) & (gnl|cdd|36059 : 335.0) no description available & (reliability: 744.0) & (original description: Putative fttB, Description = 14-3-3 protein epsilon, PFAM = PF03141;PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben101scf01397_101968-105319' '(o49998|1433f_tobac : 451.0) 14-3-3-like protein F - Nicotiana tabacum (Common tobacco) & (at1g78300 : 405.0) G-box binding factor GF14 omega encoding a 14-3-3 protein; general regulatory factor 2 (GRF2); FUNCTIONS IN: protein phosphorylated amino acid binding; INVOLVED IN: brassinosteroid mediated signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: GF14 protein phi chain (TAIR:AT1G35160.1); Has 2698 Blast hits to 2688 proteins in 383 species: Archae - 0; Bacteria - 0; Metazoa - 1259; Fungi - 318; Plants - 766; Viruses - 0; Other Eukaryotes - 355 (source: NCBI BLink). & (gnl|cdd|84639 : 389.0) no description available & (gnl|cdd|36059 : 349.0) no description available & (reliability: 810.0) & (original description: Putative GRF2, Description = 14-3-3-like protein GF14 omega, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben101scf01710_150720-164753' '(q96453|1433d_soybn : 403.0) 14-3-3-like protein D (SGF14D) - Glycine max (Soybean) & (gnl|cdd|84639 : 388.0) no description available & (at2g42590 : 371.0) 14-3-3 gene. Binds calcium and displays induced structural changes.; general regulatory factor 9 (GRF9); FUNCTIONS IN: protein phosphorylated amino acid binding, calcium ion binding; LOCATED IN: chloroplast stroma, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 12 (TAIR:AT1G26480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36059 : 349.0) no description available & (reliability: 742.0) & (original description: Putative GRF9, Description = 14-3-3-like protein GF14 mu, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben101scf02156_254566-259346' '(p93259|1433_mescr : 407.0) 14-3-3-like protein (G-box-binding factor) - Mesembryanthemum crystallinum (Common ice plant) & (at3g02520 : 400.0) Encodes GF14 ν, a 14-3-3 protein isoform (14-3-3ν).; general regulatory factor 7 (GRF7); FUNCTIONS IN: protein phosphorylated amino acid binding; LOCATED IN: nuclear envelope, chloroplast stroma, plasma membrane, chloroplast, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 3 (TAIR:AT5G38480.1); Has 2692 Blast hits to 2682 proteins in 382 species: Archae - 0; Bacteria - 0; Metazoa - 1258; Fungi - 312; Plants - 765; Viruses - 0; Other Eukaryotes - 357 (source: NCBI BLink). & (gnl|cdd|84639 : 392.0) no description available & (gnl|cdd|36059 : 350.0) no description available & (reliability: 800.0) & (original description: Putative GF14C, Description = 14-3-3-like protein GF14-C, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben101scf02366_689801-694793' '(o49997|1433e_tobac : 419.0) 14-3-3-like protein E - Nicotiana tabacum (Common tobacco) & (at5g38480 : 401.0) general regulatory factor, a 14-3-3 gene; general regulatory factor 3 (GRF3); FUNCTIONS IN: protein phosphorylated amino acid binding, ATP binding; LOCATED IN: mitochondrion, cell wall, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 7 (TAIR:AT3G02520.1); Has 2749 Blast hits to 2739 proteins in 391 species: Archae - 0; Bacteria - 6; Metazoa - 1263; Fungi - 337; Plants - 766; Viruses - 0; Other Eukaryotes - 377 (source: NCBI BLink). & (gnl|cdd|84639 : 378.0) no description available & (gnl|cdd|36059 : 341.0) no description available & (reliability: 802.0) & (original description: Putative GRF3, Description = 14-3-3-like protein GF14 psi, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben101scf02367_408160-411918' '(p93343|1433c_tobac : 460.0) 14-3-3-like protein C (14-3-3-like protein B) - Nicotiana tabacum (Common tobacco) & (at4g09000 : 402.0) Encodes a 14-3-3 gene, designated GRF1 chi (for general regulatory factor1-G-box factor 14-3-3 homolog isoform chi). The major native forms of 14-3-3s are homo- and hetero-dimers, the biological functions of which are to interact physically with specific client proteins and thereby effect a change in the client. As a result, 14-3-3s are involved in a vast array of processes such as the response to stress, cell-cycle control, and apoptosis, serving as adapters, activators, and repressors. There are currently 133 full-length sequences available.; general regulatory factor 1 (GRF1); CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: GF14 protein phi chain (TAIR:AT1G35160.2); Has 2700 Blast hits to 2690 proteins in 380 species: Archae - 0; Bacteria - 6; Metazoa - 1254; Fungi - 308; Plants - 767; Viruses - 0; Other Eukaryotes - 365 (source: NCBI BLink). & (gnl|cdd|47446 : 400.0) no description available & (gnl|cdd|36059 : 349.0) no description available & (reliability: 804.0) & (original description: Putative GRF4, Description = 14-3-3-like protein GF14 phi, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben101scf02537_1396363-1419040' '(gnl|cdd|84639 : 376.0) no description available & (q41246|1433_tobac : 367.0) 14-3-3-like protein - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36059 : 350.0) no description available & (at1g22300 : 349.0) Encodes a 14-3-3 protein. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1.; general regulatory factor 10 (GRF10); FUNCTIONS IN: protein phosphorylated amino acid binding, ATP binding; INVOLVED IN: brassinosteroid mediated signaling pathway; LOCATED IN: mitochondrion, chloroplast stroma, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 11 (TAIR:AT1G34760.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 698.0) & (original description: Putative GRF11, Description = 14-3-3-like protein GF14 omicron, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben101scf03015_340369-345475' '(o49997|1433e_tobac : 449.0) 14-3-3-like protein E - Nicotiana tabacum (Common tobacco) & (at5g38480 : 394.0) general regulatory factor, a 14-3-3 gene; general regulatory factor 3 (GRF3); FUNCTIONS IN: protein phosphorylated amino acid binding, ATP binding; LOCATED IN: mitochondrion, cell wall, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 7 (TAIR:AT3G02520.1); Has 2749 Blast hits to 2739 proteins in 391 species: Archae - 0; Bacteria - 6; Metazoa - 1263; Fungi - 337; Plants - 766; Viruses - 0; Other Eukaryotes - 377 (source: NCBI BLink). & (gnl|cdd|84639 : 383.0) no description available & (gnl|cdd|36059 : 344.0) no description available & (reliability: 788.0) & (original description: Putative GRF3, Description = 14-3-3-like protein GF14 psi, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben101scf04475_30668-36761' '(o49996|1433d_tobac : 426.0) 14-3-3-like protein D - Nicotiana tabacum (Common tobacco) & (at5g65430 : 369.0) member of 14-3-3 proteins. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1; general regulatory factor 8 (GRF8); CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: G-box regulating factor 6 (TAIR:AT5G10450.3). & (gnl|cdd|84639 : 359.0) no description available & (gnl|cdd|36059 : 319.0) no description available & (reliability: 738.0) & (original description: Putative fttB, Description = 14-3-3 protein epsilon, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben101scf04570_666342-669582' '(o49998|1433f_tobac : 445.0) 14-3-3-like protein F - Nicotiana tabacum (Common tobacco) & (at1g78300 : 397.0) G-box binding factor GF14 omega encoding a 14-3-3 protein; general regulatory factor 2 (GRF2); FUNCTIONS IN: protein phosphorylated amino acid binding; INVOLVED IN: brassinosteroid mediated signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: GF14 protein phi chain (TAIR:AT1G35160.1); Has 2698 Blast hits to 2688 proteins in 383 species: Archae - 0; Bacteria - 0; Metazoa - 1259; Fungi - 318; Plants - 766; Viruses - 0; Other Eukaryotes - 355 (source: NCBI BLink). & (gnl|cdd|84639 : 385.0) no description available & (gnl|cdd|36059 : 343.0) no description available & (reliability: 794.0) & (original description: Putative fttB, Description = 14-3-3 protein epsilon, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben101scf05959_166963-170436' '(p93342|1433a_tobac : 451.0) 14-3-3-like protein A - Nicotiana tabacum (Common tobacco) & (at1g78300 : 398.0) G-box binding factor GF14 omega encoding a 14-3-3 protein; general regulatory factor 2 (GRF2); FUNCTIONS IN: protein phosphorylated amino acid binding; INVOLVED IN: brassinosteroid mediated signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: GF14 protein phi chain (TAIR:AT1G35160.1); Has 2698 Blast hits to 2688 proteins in 383 species: Archae - 0; Bacteria - 0; Metazoa - 1259; Fungi - 318; Plants - 766; Viruses - 0; Other Eukaryotes - 355 (source: NCBI BLink). & (gnl|cdd|84639 : 388.0) no description available & (gnl|cdd|36059 : 347.0) no description available & (reliability: 796.0) & (original description: Putative fttB, Description = 14-3-3 protein epsilon, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben101scf06183_296771-305051' '(p42654|1433b_vicfa : 407.0) 14-3-3-like protein B (VFA-1433B) - Vicia faba (Broad bean) & (gnl|cdd|84639 : 388.0) no description available & (at2g42590 : 365.0) 14-3-3 gene. Binds calcium and displays induced structural changes.; general regulatory factor 9 (GRF9); FUNCTIONS IN: protein phosphorylated amino acid binding, calcium ion binding; LOCATED IN: chloroplast stroma, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 12 (TAIR:AT1G26480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36059 : 349.0) no description available & (reliability: 730.0) & (original description: Putative rad25, Description = DNA damage checkpoint protein rad25, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben101scf06516_536325-540821' '(q96451|1433b_soybn : 381.0) 14-3-3-like protein B (SGF14B) (Fragment) - Glycine max (Soybean) & (at5g65430 : 370.0) member of 14-3-3 proteins. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1; general regulatory factor 8 (GRF8); CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: G-box regulating factor 6 (TAIR:AT5G10450.3). & (gnl|cdd|84639 : 353.0) no description available & (gnl|cdd|36059 : 316.0) no description available & (reliability: 740.0) & (original description: Putative GRF8, Description = 14-3-3-like protein GF14 kappa, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben101scf07381_292092-295388' '(p93784|14335_soltu : 440.0) 14-3-3-like protein 16R - Solanum tuberosum (Potato) & (at1g78300 : 406.0) G-box binding factor GF14 omega encoding a 14-3-3 protein; general regulatory factor 2 (GRF2); FUNCTIONS IN: protein phosphorylated amino acid binding; INVOLVED IN: brassinosteroid mediated signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: GF14 protein phi chain (TAIR:AT1G35160.1); Has 2698 Blast hits to 2688 proteins in 383 species: Archae - 0; Bacteria - 0; Metazoa - 1259; Fungi - 318; Plants - 766; Viruses - 0; Other Eukaryotes - 355 (source: NCBI BLink). & (gnl|cdd|84639 : 386.0) no description available & (gnl|cdd|36059 : 346.0) no description available & (reliability: 812.0) & (original description: Putative GRF2, Description = 14-3-3-like protein GF14 omega, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben101scf07398_305169-309727' '(at1g26480 : 362.0) 14-3-3 protein GF14iota (grf12); general regulatory factor 12 (GRF12); FUNCTIONS IN: protein phosphorylated amino acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 9 (TAIR:AT2G42590.3); Has 2719 Blast hits to 2708 proteins in 388 species: Archae - 0; Bacteria - 8; Metazoa - 1259; Fungi - 334; Plants - 765; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink). & (gnl|cdd|84639 : 361.0) no description available & (p42654|1433b_vicfa : 342.0) 14-3-3-like protein B (VFA-1433B) - Vicia faba (Broad bean) & (gnl|cdd|36059 : 326.0) no description available & (reliability: 724.0) & (original description: Putative GF14, Description = 14-3-3 protein, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben101scf09559_190990-197124' '(gnl|cdd|84639 : 385.0) no description available & (p42654|1433b_vicfa : 360.0) 14-3-3-like protein B (VFA-1433B) - Vicia faba (Broad bean) & (gnl|cdd|36059 : 346.0) no description available & (at1g34760 : 337.0) Encodes a 14-3-3 protein. Binds H+-ATPase in response to blue light.; general regulatory factor 11 (GRF11); CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 12 (TAIR:AT1G26480.1); Has 2697 Blast hits to 2689 proteins in 382 species: Archae - 0; Bacteria - 0; Metazoa - 1262; Fungi - 298; Plants - 762; Viruses - 0; Other Eukaryotes - 375 (source: NCBI BLink). & (reliability: 674.0) & (original description: Putative fttB, Description = 14-3-3 protein epsilon, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben101scf10278_110333-115023' '(o49995|1433b_tobac : 452.0) 14-3-3-like protein B - Nicotiana tabacum (Common tobacco) & (at1g78300 : 394.0) G-box binding factor GF14 omega encoding a 14-3-3 protein; general regulatory factor 2 (GRF2); FUNCTIONS IN: protein phosphorylated amino acid binding; INVOLVED IN: brassinosteroid mediated signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: GF14 protein phi chain (TAIR:AT1G35160.1); Has 2698 Blast hits to 2688 proteins in 383 species: Archae - 0; Bacteria - 0; Metazoa - 1259; Fungi - 318; Plants - 766; Viruses - 0; Other Eukaryotes - 355 (source: NCBI BLink). & (gnl|cdd|84639 : 390.0) no description available & (gnl|cdd|36059 : 349.0) no description available & (reliability: 788.0) & (original description: Putative YWHAE, Description = 14-3-3 protein epsilon, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben101scf10757_45724-58441' '(o49996|1433d_tobac : 419.0) 14-3-3-like protein D - Nicotiana tabacum (Common tobacco) & (at5g65430 : 361.0) member of 14-3-3 proteins. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1; general regulatory factor 8 (GRF8); CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: G-box regulating factor 6 (TAIR:AT5G10450.3). & (gnl|cdd|84639 : 354.0) no description available & (gnl|cdd|36059 : 316.0) no description available & (reliability: 722.0) & (original description: Putative fttB, Description = 14-3-3 protein epsilon, PFAM = PF00244)' T '30.7' 'signalling.14-3-3 proteins' 'niben101scf18551_104624-108107' '(p93342|1433a_tobac : 449.0) 14-3-3-like protein A - Nicotiana tabacum (Common tobacco) & (at1g78300 : 396.0) G-box binding factor GF14 omega encoding a 14-3-3 protein; general regulatory factor 2 (GRF2); FUNCTIONS IN: protein phosphorylated amino acid binding; INVOLVED IN: brassinosteroid mediated signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: GF14 protein phi chain (TAIR:AT1G35160.1); Has 2698 Blast hits to 2688 proteins in 383 species: Archae - 0; Bacteria - 0; Metazoa - 1259; Fungi - 318; Plants - 766; Viruses - 0; Other Eukaryotes - 355 (source: NCBI BLink). & (gnl|cdd|84639 : 388.0) no description available & (gnl|cdd|36059 : 347.0) no description available & (reliability: 792.0) & (original description: Putative fttB, Description = 14-3-3-like protein, PFAM = PF00244)' T '30.8' 'signalling.misc' 'nbv0.3scaffold22435_8921-12115' '(at1g48050 : 136.0) Ku80 and ku70 form the heterodimer complex Ku, required for proper maintenance of the telomeric C strand. Ku regulates the extension of the telomeric G strand. Interacts with WEX, and this interaction stimulates the WEX exonuclease activity. Binds double stranded DNA breaks as a heterodimer with Ku70, involved in non-homologous end joining repair. Mutants are defective in T-DNA integration. Over expression confers increased resistance to DNA damage agents and increased susceptibility to T-DNA transformation.; KU80; FUNCTIONS IN: double-stranded DNA binding, protein binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ku70/Ku80, N-terminal alpha/beta (InterPro:IPR005161), DNA helicase, ATP-dependent, Ku type (InterPro:IPR006164), Spen Paralogue and Orthologue SPOC, C-terminal-like (InterPro:IPR016194), Ku70/Ku80 C-terminal arm (InterPro:IPR005160), Ku, C-terminal (InterPro:IPR014893); Has 786 Blast hits to 750 proteins in 217 species: Archae - 0; Bacteria - 40; Metazoa - 246; Fungi - 345; Plants - 62; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative KU80, Description = ATP-dependent DNA helicase 2 subunit KU80, PFAM = PF03731)' T '30.8' 'signalling.misc' 'nbv0.3scaffold71492_7349-8967' '(at4g14010 : 88.6) Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.; ralf-like 32 (RALFL32); CONTAINS InterPro DOMAIN/s: Rapid ALkalinization Factor (InterPro:IPR008801); BEST Arabidopsis thaliana protein match is: ralf-like 33 (TAIR:AT4G15800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative BnaA04g06370D, Description = BnaA04g06370D protein, PFAM = PF05498)' T '30.8' 'signalling.misc' 'nbv0.3scaffold86829_3173-5520' '(at4g15800 : 114.0) Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.; ralf-like 33 (RALFL33); CONTAINS InterPro DOMAIN/s: Rapid ALkalinization Factor (InterPro:IPR008801); BEST Arabidopsis thaliana protein match is: rapid alkalinization factor 23 (TAIR:AT3G16570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69043 : 91.2) no description available & (reliability: 228.0) & (original description: Putative RALFL33, Description = Protein RALF-like 33, PFAM = PF05498)' T '30.8' 'signalling.misc' 'nbv0.5scaffold1225_257347-260549' '(at5g67070 : 112.0) Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.; ralf-like 34 (RALFL34); CONTAINS InterPro DOMAIN/s: Rapid ALkalinization Factor (InterPro:IPR008801); BEST Arabidopsis thaliana protein match is: rapid alkalinization factor 23 (TAIR:AT3G16570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative RALFL34, Description = Protein RALF-like 34, PFAM = PF05498)' T '30.8' 'signalling.misc' 'niben101scf00215_43295-46618' '(at1g08700 : 382.0) Encodes a protein similar to animal presenilin whose expression is increased in response to potassium (K+) deprivation.; Presenilin-1 (PS1); INVOLVED IN: intracellular signaling pathway; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22A, presenilin (InterPro:IPR001108); BEST Arabidopsis thaliana protein match is: Presenilin-2 (TAIR:AT2G29900.1); Has 596 Blast hits to 445 proteins in 109 species: Archae - 4; Bacteria - 0; Metazoa - 417; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|37947 : 359.0) no description available & (gnl|cdd|85231 : 227.0) no description available & (reliability: 764.0) & (original description: Putative At1g08700, Description = Presenilin-like protein At1g08700, PFAM = PF01080)' T '30.8' 'signalling.misc' 'niben101scf00246_95861-98244' '(gnl|cdd|69043 : 97.0) no description available & (at4g15800 : 94.4) Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.; ralf-like 33 (RALFL33); CONTAINS InterPro DOMAIN/s: Rapid ALkalinization Factor (InterPro:IPR008801); BEST Arabidopsis thaliana protein match is: rapid alkalinization factor 23 (TAIR:AT3G16570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative RALF, Description = Rapid alkalinization factor 1, PFAM = PF05498)' T '30.8' 'signalling.misc' 'niben101scf00343_931660-933989' '(at4g14010 : 97.8) Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.; ralf-like 32 (RALFL32); CONTAINS InterPro DOMAIN/s: Rapid ALkalinization Factor (InterPro:IPR008801); BEST Arabidopsis thaliana protein match is: ralf-like 33 (TAIR:AT4G15800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative RALFL32, Description = Protein RALF-like 32, PFAM = PF05498)' T '30.8' 'signalling.misc' 'niben101scf00369_414083-416427' '(at4g15800 : 113.0) Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.; ralf-like 33 (RALFL33); CONTAINS InterPro DOMAIN/s: Rapid ALkalinization Factor (InterPro:IPR008801); BEST Arabidopsis thaliana protein match is: rapid alkalinization factor 23 (TAIR:AT3G16570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69043 : 93.5) no description available & (reliability: 226.0) & (original description: Putative RALF, Description = Rapid alkalinization factor, PFAM = PF05498)' T '30.8' 'signalling.misc' 'niben101scf01143_1271536-1274840' '(at2g29900 : 369.0) Presenilin-2 (PS2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular signaling pathway; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22A, presenilin (InterPro:IPR001108); BEST Arabidopsis thaliana protein match is: Presenilin-1 (TAIR:AT1G08700.1); Has 475 Blast hits to 452 proteins in 108 species: Archae - 2; Bacteria - 0; Metazoa - 334; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|37947 : 356.0) no description available & (gnl|cdd|85231 : 204.0) no description available & (reliability: 738.0) & (original description: Putative psenA, Description = Presenilin, PFAM = PF01080)' T '30.8' 'signalling.misc' 'niben101scf02709_8061-10435' '(gnl|cdd|69043 : 98.5) no description available & (at4g15800 : 98.2) Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.; ralf-like 33 (RALFL33); CONTAINS InterPro DOMAIN/s: Rapid ALkalinization Factor (InterPro:IPR008801); BEST Arabidopsis thaliana protein match is: rapid alkalinization factor 23 (TAIR:AT3G16570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative RALFL33, Description = Protein RALF-like 33, PFAM = PF05498)' T '30.8' 'signalling.misc' 'niben101scf03486_425815-438174' '(at1g48050 : 814.0) Ku80 and ku70 form the heterodimer complex Ku, required for proper maintenance of the telomeric C strand. Ku regulates the extension of the telomeric G strand. Interacts with WEX, and this interaction stimulates the WEX exonuclease activity. Binds double stranded DNA breaks as a heterodimer with Ku70, involved in non-homologous end joining repair. Mutants are defective in T-DNA integration. Over expression confers increased resistance to DNA damage agents and increased susceptibility to T-DNA transformation.; KU80; FUNCTIONS IN: double-stranded DNA binding, protein binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ku70/Ku80, N-terminal alpha/beta (InterPro:IPR005161), DNA helicase, ATP-dependent, Ku type (InterPro:IPR006164), Spen Paralogue and Orthologue SPOC, C-terminal-like (InterPro:IPR016194), Ku70/Ku80 C-terminal arm (InterPro:IPR005160), Ku, C-terminal (InterPro:IPR014893); Has 786 Blast hits to 750 proteins in 217 species: Archae - 0; Bacteria - 40; Metazoa - 246; Fungi - 345; Plants - 62; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|63882 : 280.0) no description available & (gnl|cdd|37537 : 184.0) no description available & (reliability: 1628.0) & (original description: Putative KU80, Description = ATP-dependent DNA helicase 2 subunit KU80, PFAM = PF03731;PF03730;PF08785;PF02735)' T '30.8' 'signalling.misc' 'niben101scf03486_435018-439371' '(at1g48050 : 138.0) Ku80 and ku70 form the heterodimer complex Ku, required for proper maintenance of the telomeric C strand. Ku regulates the extension of the telomeric G strand. Interacts with WEX, and this interaction stimulates the WEX exonuclease activity. Binds double stranded DNA breaks as a heterodimer with Ku70, involved in non-homologous end joining repair. Mutants are defective in T-DNA integration. Over expression confers increased resistance to DNA damage agents and increased susceptibility to T-DNA transformation.; KU80; FUNCTIONS IN: double-stranded DNA binding, protein binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ku70/Ku80, N-terminal alpha/beta (InterPro:IPR005161), DNA helicase, ATP-dependent, Ku type (InterPro:IPR006164), Spen Paralogue and Orthologue SPOC, C-terminal-like (InterPro:IPR016194), Ku70/Ku80 C-terminal arm (InterPro:IPR005160), Ku, C-terminal (InterPro:IPR014893); Has 786 Blast hits to 750 proteins in 217 species: Archae - 0; Bacteria - 40; Metazoa - 246; Fungi - 345; Plants - 62; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative KU80, Description = ATP-dependent DNA helicase 2 subunit KU80, PFAM = PF03731)' T '30.8' 'signalling.misc' 'niben101scf03488_201961-204383' '(at4g13950 : 99.0) Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.; ralf-like 31 (RALFL31); CONTAINS InterPro DOMAIN/s: Rapid ALkalinization Factor (InterPro:IPR008801); BEST Arabidopsis thaliana protein match is: ralf-like 24 (TAIR:AT3G23805.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69043 : 95.8) no description available & (reliability: 198.0) & (original description: Putative RALF, Description = Rapid ALkalinization Factor, PFAM = PF05498)' T '30.8' 'signalling.misc' 'niben101scf06518_302217-304558' '(at5g67070 : 118.0) Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.; ralf-like 34 (RALFL34); CONTAINS InterPro DOMAIN/s: Rapid ALkalinization Factor (InterPro:IPR008801); BEST Arabidopsis thaliana protein match is: rapid alkalinization factor 23 (TAIR:AT3G16570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative RALFL34, Description = Protein RALF-like 34, PFAM = PF05498)' T '30.8' 'signalling.misc' 'niben101scf06628_128057-130404' '(at4g15800 : 117.0) Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.; ralf-like 33 (RALFL33); CONTAINS InterPro DOMAIN/s: Rapid ALkalinization Factor (InterPro:IPR008801); BEST Arabidopsis thaliana protein match is: rapid alkalinization factor 23 (TAIR:AT3G16570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69043 : 90.0) no description available & (reliability: 234.0) & (original description: Putative RALF, Description = Rapid alkalinization factor, PFAM = PF05498)' T '30.8' 'signalling.misc' 'niben101scf07563_41560-44708' '(at2g15320 : 350.0) Leucine-rich repeat (LRR) family protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G66330.1); Has 72264 Blast hits to 25708 proteins in 980 species: Archae - 21; Bacteria - 3279; Metazoa - 16942; Fungi - 630; Plants - 47007; Viruses - 0; Other Eukaryotes - 4385 (source: NCBI BLink). & (gnl|cdd|39396 : 90.1) no description available & (q8lpb4|pskr_dauca : 80.9) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 700.0) & (original description: Putative At2g15320, Description = Leucine-rich repeat-containing protein, PFAM = PF13855;PF13855;PF00560;PF08263)' T '30.8' 'signalling.misc' 'niben101scf12112_204225-206683' '(gnl|cdd|69043 : 99.7) no description available & (at4g13950 : 99.4) Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.; ralf-like 31 (RALFL31); CONTAINS InterPro DOMAIN/s: Rapid ALkalinization Factor (InterPro:IPR008801); BEST Arabidopsis thaliana protein match is: ralf-like 24 (TAIR:AT3G23805.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 198.8) & (original description: Putative RALF, Description = RALFL33, putative, PFAM = PF05498)' T '30.9' 'signalling.lipids' 'nbv0.3scaffold15755_5571-23581' '(at4g32160 : 582.0) Phox (PX) domain-containing protein; CONTAINS InterPro DOMAIN/s: Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: Phox (PX) domain-containing protein (TAIR:AT2G25350.1); Has 33521 Blast hits to 21186 proteins in 1483 species: Archae - 481; Bacteria - 3615; Metazoa - 17372; Fungi - 2745; Plants - 1628; Viruses - 165; Other Eukaryotes - 7515 (source: NCBI BLink). & (reliability: 1164.0) & (original description: Putative At4g32160, Description = Phox (PX) domain-containing protein, PFAM = PF00787)' T '30.9' 'signalling.lipids' 'nbv0.3scaffold52204_1-12121' '(p42347|pi3k1_soybn : 1384.0) Phosphatidylinositol 3-kinase, root isoform (EC 2.7.1.137) (PI3-kinase) (PtdIns-3-kinase) (PI3K) (SPI3K-5) - Glycine max (Soybean) & (at1g60490 : 1325.0) Encodes a phosphatidylinositol 3-kinase that is expressed in most plant tissues. Defects in VPS34 affect a number of cellular processes. Loss of function mutations are not transmitted through the male gametophyte due to defects in microgametogenesis therefore it is difficult to assess the effects of loss of VPS34 function in the whole plant. Involved in salt-stress responses.; vacuolar protein sorting 34 (VPS34); FUNCTIONS IN: 1-phosphatidylinositol-3-kinase activity, inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: oxygen and reactive oxygen species metabolic process, response to salt stress, endocytosis, N-terminal protein myristoylation, microgametogenesis; LOCATED IN: phosphoinositide 3-kinase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), Phosphoinositide 3-kinase, accessory (PIK) domain (InterPro:IPR001263), Phosphoinositide 3-kinase, C2 (InterPro:IPR002420), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Protein kinase-like domain (InterPro:IPR011009), Phosphatidylinositol Kinase (InterPro:IPR015433), Phosphatidylinositol 3-kinase, Vps34 type (InterPro:IPR008290), Armadillo-type fold (InterPro:IPR016024), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase family protein (TAIR:AT1G49340.1); Has 3550 Blast hits to 3392 proteins in 278 species: Archae - 0; Bacteria - 0; Metazoa - 1514; Fungi - 819; Plants - 335; Viruses - 4; Other Eukaryotes - 878 (source: NCBI BLink). & (gnl|cdd|36124 : 992.0) no description available & (gnl|cdd|29061 : 588.0) no description available & (reliability: 2650.0) & (original description: Putative pik5, Description = Phosphatidylinositol 3-kinase, PFAM = PF00613;PF00792;PF00454)' T '30.9' 'signalling.lipids' 'nbv0.5scaffold3735_146667-159334' '(p42347|pi3k1_soybn : 1324.0) Phosphatidylinositol 3-kinase, root isoform (EC 2.7.1.137) (PI3-kinase) (PtdIns-3-kinase) (PI3K) (SPI3K-5) - Glycine max (Soybean) & (at1g60490 : 1268.0) Encodes a phosphatidylinositol 3-kinase that is expressed in most plant tissues. Defects in VPS34 affect a number of cellular processes. Loss of function mutations are not transmitted through the male gametophyte due to defects in microgametogenesis therefore it is difficult to assess the effects of loss of VPS34 function in the whole plant. Involved in salt-stress responses.; vacuolar protein sorting 34 (VPS34); FUNCTIONS IN: 1-phosphatidylinositol-3-kinase activity, inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: oxygen and reactive oxygen species metabolic process, response to salt stress, endocytosis, N-terminal protein myristoylation, microgametogenesis; LOCATED IN: phosphoinositide 3-kinase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), Phosphoinositide 3-kinase, accessory (PIK) domain (InterPro:IPR001263), Phosphoinositide 3-kinase, C2 (InterPro:IPR002420), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Protein kinase-like domain (InterPro:IPR011009), Phosphatidylinositol Kinase (InterPro:IPR015433), Phosphatidylinositol 3-kinase, Vps34 type (InterPro:IPR008290), Armadillo-type fold (InterPro:IPR016024), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase family protein (TAIR:AT1G49340.1); Has 3550 Blast hits to 3392 proteins in 278 species: Archae - 0; Bacteria - 0; Metazoa - 1514; Fungi - 819; Plants - 335; Viruses - 4; Other Eukaryotes - 878 (source: NCBI BLink). & (gnl|cdd|36124 : 952.0) no description available & (gnl|cdd|29061 : 589.0) no description available & (reliability: 2536.0) & (original description: Putative pik3c3, Description = Phosphatidylinositol 3-kinase, PFAM = PF00613;PF00454;PF00792)' T '30.9' 'signalling.lipids' 'niben044scf00009268ctg006_1879-4364' '(at5g05710 : 230.0) Pleckstrin homology (PH) domain superfamily protein; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: pleckstrin homologue 1 (TAIR:AT2G29700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative PH1, Description = AtPH1, PFAM = PF00169)' T '30.9' 'signalling.lipids' 'niben044scf00021298ctg011_12913-15461' '(at2g29700 : 216.0) Encodes a protein containing one PH (pleckstrin homology) domain with a short N-terminal extension; pleckstrin homologue 1 (PH1); CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Pleckstrin homology (PH) domain superfamily protein (TAIR:AT5G05710.1); Has 2358 Blast hits to 2352 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 1854; Fungi - 32; Plants - 108; Viruses - 3; Other Eukaryotes - 361 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative PH1, Description = Pleckstrin homology domain-containing protein 1, PFAM = PF00169)' T '30.9' 'signalling.lipids' 'niben044scf00042070ctg001_5182-13596' '(at4g32160 : 451.0) Phox (PX) domain-containing protein; CONTAINS InterPro DOMAIN/s: Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: Phox (PX) domain-containing protein (TAIR:AT2G25350.1); Has 33521 Blast hits to 21186 proteins in 1483 species: Archae - 481; Bacteria - 3615; Metazoa - 17372; Fungi - 2745; Plants - 1628; Viruses - 165; Other Eukaryotes - 7515 (source: NCBI BLink). & (reliability: 902.0) & (original description: Putative BnaA03g51930D, Description = BnaA03g51930D protein, PFAM = PF00787)' T '30.9' 'signalling.lipids' 'niben044scf00053527ctg001_4110-11259' '(at3g13062 : 360.0) Polyketide cyclase/dehydrase and lipid transport superfamily protein; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT1G55960.1); Has 323 Blast hits to 323 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 142; Fungi - 0; Plants - 155; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|37972 : 193.0) no description available & (gnl|cdd|29139 : 94.7) no description available & (reliability: 684.0) & (original description: Putative BnaCnng63240D, Description = BnaCnng63240D protein, PFAM = PF01852)' T '30.9' 'signalling.lipids' 'niben101scf01694_923782-926213' '(at2g29700 : 214.0) Encodes a protein containing one PH (pleckstrin homology) domain with a short N-terminal extension; pleckstrin homologue 1 (PH1); CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Pleckstrin homology (PH) domain superfamily protein (TAIR:AT5G05710.1); Has 2358 Blast hits to 2352 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 1854; Fungi - 32; Plants - 108; Viruses - 3; Other Eukaryotes - 361 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative PH1, Description = Pleckstrin homology domain-containing protein 1, PFAM = PF00169)' T '30.9' 'signalling.lipids' 'niben101scf02280_416911-419342' '(at5g05710 : 219.0) Pleckstrin homology (PH) domain superfamily protein; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: pleckstrin homologue 1 (TAIR:AT2G29700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative PH1, Description = Pleckstrin homology domain-containing protein 1, PFAM = PF00169)' T '30.9' 'signalling.lipids' 'niben101scf02358_249056-261961' '(p42347|pi3k1_soybn : 1389.0) Phosphatidylinositol 3-kinase, root isoform (EC 2.7.1.137) (PI3-kinase) (PtdIns-3-kinase) (PI3K) (SPI3K-5) - Glycine max (Soybean) & (at1g60490 : 1324.0) Encodes a phosphatidylinositol 3-kinase that is expressed in most plant tissues. Defects in VPS34 affect a number of cellular processes. Loss of function mutations are not transmitted through the male gametophyte due to defects in microgametogenesis therefore it is difficult to assess the effects of loss of VPS34 function in the whole plant. Involved in salt-stress responses.; vacuolar protein sorting 34 (VPS34); FUNCTIONS IN: 1-phosphatidylinositol-3-kinase activity, inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: oxygen and reactive oxygen species metabolic process, response to salt stress, endocytosis, N-terminal protein myristoylation, microgametogenesis; LOCATED IN: phosphoinositide 3-kinase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), Phosphoinositide 3-kinase, accessory (PIK) domain (InterPro:IPR001263), Phosphoinositide 3-kinase, C2 (InterPro:IPR002420), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Protein kinase-like domain (InterPro:IPR011009), Phosphatidylinositol Kinase (InterPro:IPR015433), Phosphatidylinositol 3-kinase, Vps34 type (InterPro:IPR008290), Armadillo-type fold (InterPro:IPR016024), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase family protein (TAIR:AT1G49340.1); Has 3550 Blast hits to 3392 proteins in 278 species: Archae - 0; Bacteria - 0; Metazoa - 1514; Fungi - 819; Plants - 335; Viruses - 4; Other Eukaryotes - 878 (source: NCBI BLink). & (gnl|cdd|36124 : 994.0) no description available & (gnl|cdd|29061 : 588.0) no description available & (reliability: 2648.0) & (original description: Putative pik5, Description = Phosphatidylinositol 3-kinase, PFAM = PF00613;PF00454;PF00792)' T '30.9' 'signalling.lipids' 'niben101scf04651_13709-39709' '(at4g32160 : 570.0) Phox (PX) domain-containing protein; CONTAINS InterPro DOMAIN/s: Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: Phox (PX) domain-containing protein (TAIR:AT2G25350.1); Has 33521 Blast hits to 21186 proteins in 1483 species: Archae - 481; Bacteria - 3615; Metazoa - 17372; Fungi - 2745; Plants - 1628; Viruses - 165; Other Eukaryotes - 7515 (source: NCBI BLink). & (reliability: 1140.0) & (original description: Putative At4g32160, Description = Phox (PX) domain-containing protein, PFAM = PF00787)' T '30.9' 'signalling.lipids' 'niben101scf04954_121810-131380' '(at2g28320 : 936.0) Pleckstrin homology (PH) and lipid-binding START domains-containing protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769), Pleckstrin homology-type (InterPro:IPR011993), Lipid-binding START (InterPro:IPR002913), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Pleckstrin homology (PH) and lipid-binding START domains-containing protein (TAIR:AT3G54800.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70520 : 253.0) no description available & (reliability: 1802.0) & (original description: Putative At2g28320, Description = Pleckstrin homology (PH) and lipid-binding START domain-containing protein, PFAM = PF01852;PF00169;PF07059)' T '30.9' 'signalling.lipids' 'niben101scf06091_567415-577058' '(at3g15920 : 426.0) Phox (PX) domain-containing protein; CONTAINS InterPro DOMAIN/s: Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: Phox (PX) domain-containing protein (TAIR:AT4G32160.1); Has 39660 Blast hits to 24703 proteins in 1619 species: Archae - 570; Bacteria - 4339; Metazoa - 20583; Fungi - 3176; Plants - 1789; Viruses - 109; Other Eukaryotes - 9094 (source: NCBI BLink). & (reliability: 852.0) & (original description: Putative BnaC07g43680D, Description = BnaC07g43680D protein, PFAM = PF00787)' T '30.9' 'signalling.lipids' 'niben101scf11153_72550-79434' '(at3g13062 : 316.0) Polyketide cyclase/dehydrase and lipid transport superfamily protein; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT1G55960.1); Has 323 Blast hits to 323 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 142; Fungi - 0; Plants - 155; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|37972 : 190.0) no description available & (gnl|cdd|29139 : 94.3) no description available & (reliability: 606.0) & (original description: Putative At1g55960, Description = BnaA01g30080D protein, PFAM = PF01852)' T '30.9' 'signalling.lipids' 'niben101scf24322_18865-21296' '(at5g05710 : 222.0) Pleckstrin homology (PH) domain superfamily protein; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: pleckstrin homologue 1 (TAIR:AT2G29700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 444.0) & (original description: Putative PH1, Description = Pleckstrin homology domain-containing protein 1, PFAM = PF00169)' T '30.10' 'signalling.phosphorelay' 'nbv0.3scaffold13991_39316-45174' '(at3g16360 : 121.0) Encodes AHP4, a histidine-containing phosphotransmitter involved in Histidine (His)-to-Aspartate (Asp) phosphorelay signal transduction. AHP4 is one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).; HPT phosphotransmitter 4 (AHP4); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, phosphotransfer (Hpt) domain (InterPro:IPR008207); BEST Arabidopsis thaliana protein match is: histidine-containing phosphotransmitter 2 (TAIR:AT3G29350.1). & (gnl|cdd|39944 : 106.0) no description available & (reliability: 242.0) & (original description: Putative hpt4, Description = Histidine-containing phosphotransfer protein 4, PFAM = )' T '30.10' 'signalling.phosphorelay' 'nbv0.3scaffold57380_6461-10617' '(at3g16360 : 103.0) Encodes AHP4, a histidine-containing phosphotransmitter involved in Histidine (His)-to-Aspartate (Asp) phosphorelay signal transduction. AHP4 is one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).; HPT phosphotransmitter 4 (AHP4); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, phosphotransfer (Hpt) domain (InterPro:IPR008207); BEST Arabidopsis thaliana protein match is: histidine-containing phosphotransmitter 2 (TAIR:AT3G29350.1). & (reliability: 206.0) & (original description: Putative)' T '30.10' 'signalling.phosphorelay' 'nbv0.3scaffold86094_472-6070' '(at3g16360 : 166.0) Encodes AHP4, a histidine-containing phosphotransmitter involved in Histidine (His)-to-Aspartate (Asp) phosphorelay signal transduction. AHP4 is one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).; HPT phosphotransmitter 4 (AHP4); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, phosphotransfer (Hpt) domain (InterPro:IPR008207); BEST Arabidopsis thaliana protein match is: histidine-containing phosphotransmitter 2 (TAIR:AT3G29350.1). & (gnl|cdd|39944 : 136.0) no description available & (q6vak4|hp1_orysa : 95.5) Histidine-containing phosphotransfer protein 1 (OsHP1) - Oryza sativa (Rice) & (reliability: 332.0) & (original description: Putative hpt4, Description = Histidine phosphotransfer protein, PFAM = PF01627)' T '30.10' 'signalling.phosphorelay' 'nbv0.5scaffold6773_47761-53709' '(at3g16360 : 119.0) Encodes AHP4, a histidine-containing phosphotransmitter involved in Histidine (His)-to-Aspartate (Asp) phosphorelay signal transduction. AHP4 is one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).; HPT phosphotransmitter 4 (AHP4); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, phosphotransfer (Hpt) domain (InterPro:IPR008207); BEST Arabidopsis thaliana protein match is: histidine-containing phosphotransmitter 2 (TAIR:AT3G29350.1). & (gnl|cdd|39944 : 103.0) no description available & (reliability: 238.0) & (original description: Putative hpt4, Description = Histidine-containing phosphotransfer protein 4, PFAM = )' T '30.10' 'signalling.phosphorelay' 'niben044scf00023850ctg006_338-4187' '(at3g21510 : 184.0) Encodes AHP1, one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).; histidine-containing phosphotransmitter 1 (AHP1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, phosphotransfer (Hpt) domain (InterPro:IPR008207); BEST Arabidopsis thaliana protein match is: histidine-containing phosphotransfer factor 5 (TAIR:AT1G03430.1); Has 358 Blast hits to 357 proteins in 69 species: Archae - 2; Bacteria - 42; Metazoa - 0; Fungi - 41; Plants - 268; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|39944 : 156.0) no description available & (q6vak4|hp1_orysa : 125.0) Histidine-containing phosphotransfer protein 1 (OsHP1) - Oryza sativa (Rice) & (reliability: 368.0) & (original description: Putative hpt2, Description = Putative histidine-containing phosphotransfer protein 2, PFAM = PF01627)' T '30.10' 'signalling.phosphorelay' 'niben101scf00745_334155-341195' '(at3g16360 : 88.2) Encodes AHP4, a histidine-containing phosphotransmitter involved in Histidine (His)-to-Aspartate (Asp) phosphorelay signal transduction. AHP4 is one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).; HPT phosphotransmitter 4 (AHP4); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, phosphotransfer (Hpt) domain (InterPro:IPR008207); BEST Arabidopsis thaliana protein match is: histidine-containing phosphotransmitter 2 (TAIR:AT3G29350.1). & (reliability: 176.4) & (original description: Putative hpt4, Description = Histidine phosphotransfer protein, PFAM = )' T '30.10' 'signalling.phosphorelay' 'niben101scf01415_17599-23517' '(at3g21510 : 157.0) Encodes AHP1, one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).; histidine-containing phosphotransmitter 1 (AHP1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, phosphotransfer (Hpt) domain (InterPro:IPR008207); BEST Arabidopsis thaliana protein match is: histidine-containing phosphotransfer factor 5 (TAIR:AT1G03430.1); Has 358 Blast hits to 357 proteins in 69 species: Archae - 2; Bacteria - 42; Metazoa - 0; Fungi - 41; Plants - 268; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|39944 : 156.0) no description available & (q6vak4|hp1_orysa : 100.0) Histidine-containing phosphotransfer protein 1 (OsHP1) - Oryza sativa (Rice) & (reliability: 314.0) & (original description: Putative hpt7, Description = Putative histidine phosphotransfer protein 7, PFAM = PF01627)' T '30.10' 'signalling.phosphorelay' 'niben101scf02217_653636-659902' '(at3g16360 : 87.4) Encodes AHP4, a histidine-containing phosphotransmitter involved in Histidine (His)-to-Aspartate (Asp) phosphorelay signal transduction. AHP4 is one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).; HPT phosphotransmitter 4 (AHP4); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, phosphotransfer (Hpt) domain (InterPro:IPR008207); BEST Arabidopsis thaliana protein match is: histidine-containing phosphotransmitter 2 (TAIR:AT3G29350.1). & (reliability: 174.8) & (original description: Putative hpt4, Description = Histidine phosphotransfer protein, PFAM = )' T '30.10' 'signalling.phosphorelay' 'niben101scf02819_120191-123473' '(at1g80100 : 198.0) AHP6 lacks the conserved histidine residue (Asn83 in AHP6b), which is required for phosphotransfer, present in the other AHPs. AHP6 does not appear to have phosphotransfer activity. Acts as an inhibitor of cytokinin signaling by interacting with the phosphorelay machinery. Expressed in developing protoxylem and associated pericycle cell files. Negative regulator of cytokinin signaling. Expression is down-regulated by cytokinins. There are two alternatively spliced genes for this locus, AHP6a and AHP6b, differing in the length of the first exon. In ahp6-2 seedlings, only the AHP6a transcript is present. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).; histidine phosphotransfer protein 6 (HP6); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, phosphotransfer (Hpt) domain (InterPro:IPR008207); BEST Arabidopsis thaliana protein match is: histidine-containing phosphotransfer factor 5 (TAIR:AT1G03430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39944 : 145.0) no description available & (reliability: 396.0) & (original description: Putative AHP6, Description = Pseudo histidine-containing phosphotransfer protein 6, PFAM = PF01627)' T '30.10' 'signalling.phosphorelay' 'niben101scf10650_23469-27915' '(at3g16360 : 198.0) Encodes AHP4, a histidine-containing phosphotransmitter involved in Histidine (His)-to-Aspartate (Asp) phosphorelay signal transduction. AHP4 is one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).; HPT phosphotransmitter 4 (AHP4); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, phosphotransfer (Hpt) domain (InterPro:IPR008207); BEST Arabidopsis thaliana protein match is: histidine-containing phosphotransmitter 2 (TAIR:AT3G29350.1). & (gnl|cdd|39944 : 143.0) no description available & (q6vak4|hp1_orysa : 105.0) Histidine-containing phosphotransfer protein 1 (OsHP1) - Oryza sativa (Rice) & (reliability: 396.0) & (original description: Putative hpt4, Description = Histidine phosphotransfer protein, PFAM = PF01627)' T '30.10' 'signalling.phosphorelay' 'niben101scf11723_202894-207991' '(at3g21510 : 172.0) Encodes AHP1, one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).; histidine-containing phosphotransmitter 1 (AHP1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, phosphotransfer (Hpt) domain (InterPro:IPR008207); BEST Arabidopsis thaliana protein match is: histidine-containing phosphotransfer factor 5 (TAIR:AT1G03430.1); Has 358 Blast hits to 357 proteins in 69 species: Archae - 2; Bacteria - 42; Metazoa - 0; Fungi - 41; Plants - 268; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|39944 : 159.0) no description available & (q6vak4|hp1_orysa : 112.0) Histidine-containing phosphotransfer protein 1 (OsHP1) - Oryza sativa (Rice) & (reliability: 344.0) & (original description: Putative hpt2, Description = Putative histidine-containing phosphotransfer protein 2, PFAM = PF01627)' T '30.10' 'signalling.phosphorelay' 'niben101scf13549_33078-37667' '(at3g21510 : 167.0) Encodes AHP1, one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).; histidine-containing phosphotransmitter 1 (AHP1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, phosphotransfer (Hpt) domain (InterPro:IPR008207); BEST Arabidopsis thaliana protein match is: histidine-containing phosphotransfer factor 5 (TAIR:AT1G03430.1); Has 358 Blast hits to 357 proteins in 69 species: Archae - 2; Bacteria - 42; Metazoa - 0; Fungi - 41; Plants - 268; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|39944 : 146.0) no description available & (q6vak4|hp1_orysa : 118.0) Histidine-containing phosphotransfer protein 1 (OsHP1) - Oryza sativa (Rice) & (reliability: 334.0) & (original description: Putative HPT5, Description = Histidine phosphotransfer protein HPT5, PFAM = PF01627)' T '30.10' 'signalling.phosphorelay' 'niben101scf15156_103574-108015' '(at3g21510 : 171.0) Encodes AHP1, one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).; histidine-containing phosphotransmitter 1 (AHP1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, phosphotransfer (Hpt) domain (InterPro:IPR008207); BEST Arabidopsis thaliana protein match is: histidine-containing phosphotransfer factor 5 (TAIR:AT1G03430.1); Has 358 Blast hits to 357 proteins in 69 species: Archae - 2; Bacteria - 42; Metazoa - 0; Fungi - 41; Plants - 268; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|39944 : 148.0) no description available & (q6vak4|hp1_orysa : 122.0) Histidine-containing phosphotransfer protein 1 (OsHP1) - Oryza sativa (Rice) & (reliability: 342.0) & (original description: Putative hpt7, Description = Putative histidine phosphotransfer protein 7, PFAM = PF01627)' T '30.11' 'signalling.light' 'nbv0.3scaffold2008_3201-42240' '(at1g25540 : 580.0) Encodes a nuclear protein that acts in a phyB pathway (but downstream of phyB) and induces flowering in response to suboptimal light conditions. Mutants are hypo-responsive to far-red and hyper-responsive to red light and flower late under long day conditions. Also shown to be a Mediator subunit regulating jasmonate-dependent defense.; PHYTOCHROME AND FLOWERING TIME 1 (PFT1); FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: in 8 processes; LOCATED IN: mediator complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med25, von Willebrand factor type A (InterPro:IPR021419); Has 143907 Blast hits to 47238 proteins in 2114 species: Archae - 36; Bacteria - 15136; Metazoa - 49480; Fungi - 14034; Plants - 10447; Viruses - 822; Other Eukaryotes - 53952 (source: NCBI BLink). & (reliability: 1160.0) & (original description: Putative BnaCnng04590D, Description = BnaCnng04590D protein, PFAM = PF11265)' T '30.11' 'signalling.light' 'nbv0.3scaffold9188_10498-14683' '(at1g55080 : 102.0) MED9; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G29580.1); Has 67203 Blast hits to 25757 proteins in 1293 species: Archae - 12; Bacteria - 4374; Metazoa - 24340; Fungi - 7940; Plants - 5927; Viruses - 273; Other Eukaryotes - 24337 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative MED9, Description = Mediator of RNA polymerase II transcription subunit 9, PFAM = )' T '30.11' 'signalling.light' 'nbv0.3scaffold10656_5796-17039' '(at4g11110 : 723.0) Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA2 primarily regulates seedling development in darkness and has little function in light-grown seedlings or adult plants.; SPA1-related 2 (SPA2); FUNCTIONS IN: protein binding, signal transducer activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), Protein kinase, catalytic domain (InterPro:IPR000719), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA (suppressor of phyA-105) protein family (TAIR:AT2G46340.1); Has 34047 Blast hits to 20982 proteins in 883 species: Archae - 38; Bacteria - 5461; Metazoa - 12841; Fungi - 7307; Plants - 4015; Viruses - 10; Other Eukaryotes - 4375 (source: NCBI BLink). & (p93471|cop1_pea : 260.0) E3 ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive photomorphogenesis protein 1) - Pisum sativum (Garden pea) & (gnl|cdd|36251 : 108.0) no description available & (gnl|cdd|29257 : 80.4) no description available & (reliability: 1446.0) & (original description: Putative rfwd2, Description = Protein SPA1-RELATED 2, PFAM = )' T '30.11' 'signalling.light' 'nbv0.3scaffold12695_9586-16272' '(p55004|phye_iponi : 1756.0) Phytochrome E - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (at4g18130 : 1403.0) member of Histidine Kinase; phytochrome E (PHYE); FUNCTIONS IN: protein histidine kinase activity, G-protein coupled photoreceptor activity, signal transducer activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phytochrome, central region (InterPro:IPR013515), Signal transduction histidine kinase, core (InterPro:IPR005467), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Phytochrome chromophore attachment domain (InterPro:IPR016132), ATPase-like, ATP-binding domain (InterPro:IPR003594), PAS fold-2 (InterPro:IPR013654), Phytochrome A/B/C/D/E (InterPro:IPR012129), Phytochrome (InterPro:IPR001294), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Phytochrome chromophore binding site (InterPro:IPR013516), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: phytochrome B (TAIR:AT2G18790.1); Has 25391 Blast hits to 25044 proteins in 3724 species: Archae - 289; Bacteria - 19481; Metazoa - 8; Fungi - 476; Plants - 4006; Viruses - 9; Other Eukaryotes - 1122 (source: NCBI BLink). & (gnl|cdd|33974 : 347.0) no description available & (reliability: 2806.0) & (original description: Putative PHYE, Description = Phytochrome E, PFAM = PF00512;PF00360;PF02518;PF08446;PF01590;PF00989;PF00989)' T '30.11' 'signalling.light' 'nbv0.3scaffold22189_25801-31111' '(at4g29080 : 236.0) phytochrome-associated protein 2 (PAP2); phytochrome-associated protein 2 (PAP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of translation; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 8 (TAIR:AT2G22670.4); Has 2237 Blast hits to 2234 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 2235; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66035 : 215.0) no description available & (q6at33|iaa19_orysa : 181.0) Auxin-responsive protein IAA19 (Indoleacetic acid-induced protein 19) - Oryza sativa (Rice) & (reliability: 472.0) & (original description: Putative IAA27, Description = Auxin-responsive protein IAA27, PFAM = PF02309)' T '30.11' 'signalling.light' 'nbv0.3scaffold23404_1-5033' '(at3g19850 : 474.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G50280.1); Has 817 Blast hits to 802 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 810; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|66659 : 207.0) no description available & (q5ks50|nph3_orysa : 114.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (reliability: 948.0) & (original description: Putative At3g19850, Description = BTB/POZ domain-containing protein At3g19850, PFAM = PF03000)' T '30.11' 'signalling.light' 'nbv0.3scaffold25184_692-5342' '(at5g59560 : 132.0) Encodes a novel protein conserved in higher eukaryotes. Normal function of the protein is required for normal oscillator function during circadian rhythm. Mutant analyses also suggest a role in phytochrome B (phyB)-mediated light signaling.; SENSITIVITY TO RED LIGHT REDUCED 1 (SRR1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of circadian rhythm, red, far-red light phototransduction; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sensitivity To Red Light Reduced-like, SRR1 (InterPro:IPR012942); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38341 : 105.0) no description available & (reliability: 264.0) & (original description: Putative PGSC0003DMG400006032, Description = , PFAM = PF13456;PF07985)' T '30.11' 'signalling.light' 'nbv0.3scaffold26365_2544-6169' '(at4g17230 : 606.0) Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family.; SCARECROW-like 13 (SCL13); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: scarecrow-like 5 (TAIR:AT1G50600.1); Has 2512 Blast hits to 2467 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 516.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 336.0) no description available & (reliability: 1212.0) & (original description: Putative SCL13, Description = Scarecrow-like protein 13, PFAM = PF03514)' T '30.11' 'signalling.light' 'nbv0.3scaffold33663_174-6354' '(at5g10250 : 454.0) Encodes a protein with an N-terminal BTB/POZ domain and a C-terminal NPH3 family domain. dot3 mutants have defects in shoot and primary root growth and produce an aberrant parallel venation pattern in juvenile leaves.; DEFECTIVELY ORGANIZED TRIBUTARIES 3 (DOT3); FUNCTIONS IN: signal transducer activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf primordium; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT5G64330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5ks50|nph3_orysa : 311.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 203.0) no description available & (reliability: 908.0) & (original description: Putative DOT3, Description = BTB/POZ domain-containing protein DOT3, PFAM = PF03000;PF00651)' T '30.11' 'signalling.light' 'nbv0.3scaffold39579_1916-4854' '(at2g02950 : 90.5) Encodes a basic soluble protein which can independently bind to either PHYA or PHYB, regardless of whether the phytochromes are in the Pr or Pfr state. PKS1 can be phosphorylated by oat phyA in vitro in a light regulated manner. It is postulated to be a negative regulator of phyB signalling.; phytochrome kinase substrate 1 (PKS1); BEST Arabidopsis thaliana protein match is: phytochrome kinase substrate 2 (TAIR:AT1G14280.1); Has 564 Blast hits to 331 proteins in 102 species: Archae - 0; Bacteria - 114; Metazoa - 82; Fungi - 26; Plants - 127; Viruses - 0; Other Eukaryotes - 215 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative PGSC0003DMG400033102, Description = Phytochrome kinase substrate, putative, PFAM = )' T '30.11' 'signalling.light' 'nbv0.3scaffold46380_1280-6261' '(at4g15090 : 989.0) Encodes a nuclear localized protein involved in far red light response signaling. Loss of function mutants are defective in far red light responses. Interacts with homologous gene FHY3.; FAR-RED IMPAIRED RESPONSE 1 (FAR1); CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: far-red elongated hypocotyls 3 (TAIR:AT3G22170.2); Has 1639 Blast hits to 1460 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 107; Plants - 1519; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|86237 : 107.0) no description available & (reliability: 1978.0) & (original description: Putative FAR1, Description = Protein FAR-RED IMPAIRED RESPONSE 1, PFAM = PF03101;PF10551;PF04434)' T '30.11' 'signalling.light' 'nbv0.3scaffold64649_92-7589' '(at2g37680 : 352.0) CONTAINS InterPro DOMAIN/s: Vacuolar import/degradation protein Vid24 (InterPro:IPR018618); Has 318 Blast hits to 317 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 184; Plants - 51; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|39835 : 125.0) no description available & (gnl|cdd|34677 : 101.0) no description available & (reliability: 704.0) & (original description: Putative , Description = L-type lectin-domain containing receptor kinase IV.1, PFAM = PF09783)' T '30.11' 'signalling.light' 'nbv0.3scaffold66240_1331-9199' '(at3g18890 : 385.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G34460.1); Has 26348 Blast hits to 17063 proteins in 1661 species: Archae - 97; Bacteria - 5228; Metazoa - 9723; Fungi - 4680; Plants - 1695; Viruses - 652; Other Eukaryotes - 4273 (source: NCBI BLink). & (gnl|cdd|36417 : 194.0) no description available & (reliability: 770.0) & (original description: Putative TIC62, Description = Protein TIC 62, chloroplastic, PFAM = PF13460)' T '30.11' 'signalling.light' 'nbv0.3scaffold75972_2153-7833' '(at2g14820 : 674.0) A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis.; NAKED PINS IN YUC MUTANTS 2 (NPY2); FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypophysis, root meristem; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT5G67440.1); Has 895 Blast hits to 867 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 2; Plants - 877; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (q5ks50|nph3_orysa : 317.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 283.0) no description available & (reliability: 1348.0) & (original description: Putative NPY2, Description = BTB/POZ domain-containing protein NPY2, PFAM = PF00651;PF03000)' T '30.11' 'signalling.light' 'nbv0.3scaffold124364_398-1926' '(at5g66560 : 161.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT3G50840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative BZIP22, Description = Phototropic-responsive NPH3 family protein, PFAM = )' T '30.11' 'signalling.light' 'nbv0.5scaffold69_1273535-1287467' '(at3g45780 : 1309.0) Blue-light photoreceptor. Contains a light activated serine-threonine kinase domain and LOV1 and LOV2 repeats. Mutants are defective in blue-light response. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT1 undergoes blue-light-dependent autophosphorylation. At least eight phosphorylation sites have been identified in PHOT1. Phosphorylation of serine851 in the activation loop of PHOT1 appears to be required for stomatal opening, chloroplast accumulation, leaf flattening, and phototropism, and phosphorylation of serine849 may also contribute to the regulation of these responses. Phosphorylation-dependent binding of 14-3-3 proteins to the Hinge1 region of PHOT1 appears to require serine350 and serine376.; phototropin 1 (PHOT1); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, FMN binding, kinase activity, blue light photoreceptor activity; INVOLVED IN: in 8 processes; LOCATED IN: internal side of plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: phototropin 2 (TAIR:AT5G58140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35830 : 449.0) no description available & (p15792|kpk1_phavu : 323.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|29142 : 258.0) no description available & (reliability: 2618.0) & (original description: Putative PHOT1, Description = Phototropin-1, PFAM = PF00069;PF13426;PF13426)' T '30.11' 'signalling.light' 'nbv0.5scaffold180_547959-564248' '(at1g67310 : 702.0) Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains; FUNCTIONS IN: calmodulin binding, transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Ankyrin repeat-containing domain (InterPro:IPR020683), CG-1 (InterPro:IPR005559), Cell surface receptor IPT/TIG (InterPro:IPR002909), Ankyrin repeat (InterPro:IPR002110), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: signal responsive 1 (TAIR:AT2G22300.2); Has 4214 Blast hits to 2978 proteins in 268 species: Archae - 9; Bacteria - 179; Metazoa - 1855; Fungi - 220; Plants - 413; Viruses - 4; Other Eukaryotes - 1534 (source: NCBI BLink). & (gnl|cdd|35740 : 609.0) no description available & (gnl|cdd|67472 : 199.0) no description available & (reliability: 1404.0) & (original description: Putative CMTA4, Description = Calmodulin-binding transcription activator 4, PFAM = PF01833;PF03859;PF00612;PF00612;PF12796)' T '30.11' 'signalling.light' 'nbv0.5scaffold182_413450-416455' '(at2g43280 : 139.0) Far-red impaired responsive (FAR1) family protein; CONTAINS InterPro DOMAIN/s: Transcription factor, FAR1-related (InterPro:IPR004330); BEST Arabidopsis thaliana protein match is: Far-red impaired responsive (FAR1) family protein (TAIR:AT3G07500.1); Has 806 Blast hits to 746 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 806; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86237 : 97.7) no description available & (reliability: 278.0) & (original description: Putative At4g12850, Description = At4g12850, PFAM = PF03101)' T '30.11' 'signalling.light' 'nbv0.5scaffold182_423781-461890' '(at3g07500 : 216.0) Far-red impaired responsive (FAR1) family protein; CONTAINS InterPro DOMAIN/s: Transcription factor, FAR1-related (InterPro:IPR004330); BEST Arabidopsis thaliana protein match is: Far-red impaired responsive (FAR1) family protein (TAIR:AT2G43280.1); Has 895 Blast hits to 827 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 895; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86237 : 97.3) no description available & (reliability: 432.0) & (original description: Putative BnaA05g30130D, Description = BnaA05g30130D protein, PFAM = PF03101)' T '30.11' 'signalling.light' 'nbv0.5scaffold216_591182-620104' '(at1g25540 : 407.0) Encodes a nuclear protein that acts in a phyB pathway (but downstream of phyB) and induces flowering in response to suboptimal light conditions. Mutants are hypo-responsive to far-red and hyper-responsive to red light and flower late under long day conditions. Also shown to be a Mediator subunit regulating jasmonate-dependent defense.; PHYTOCHROME AND FLOWERING TIME 1 (PFT1); FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: in 8 processes; LOCATED IN: mediator complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med25, von Willebrand factor type A (InterPro:IPR021419); Has 143907 Blast hits to 47238 proteins in 2114 species: Archae - 36; Bacteria - 15136; Metazoa - 49480; Fungi - 14034; Plants - 10447; Viruses - 822; Other Eukaryotes - 53952 (source: NCBI BLink). & (reliability: 814.0) & (original description: Putative PFT1, Description = Mediator of RNA polymerase II transcription subunit 25, PFAM = PF11265)' T '30.11' 'signalling.light' 'nbv0.5scaffold624_168710-173285' '(at2g30520 : 836.0) light inducible root phototropism 2 encoding a signal transducer of the phototropic response in Arabidopsis; ROOT PHOTOTROPISM 2 (RPT2); FUNCTIONS IN: signal transducer activity; INVOLVED IN: phototropism; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT5G67385.1); Has 865 Blast hits to 833 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 860; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q5ks50|nph3_orysa : 286.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 259.0) no description available & (reliability: 1672.0) & (original description: Putative RPT2, Description = Root phototropism protein 2, PFAM = PF00651;PF03000)' T '30.11' 'signalling.light' 'nbv0.5scaffold887_420901-424210' '(at4g38180 : 168.0) FAR1-related sequence 5 (FRS5); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 3 (TAIR:AT2G27110.2); Has 1793 Blast hits to 1580 proteins in 47 species: Archae - 2; Bacteria - 0; Metazoa - 4; Fungi - 136; Plants - 1646; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative Os11g0681300, Description = Os11g0681300 protein, PFAM = PF10551)' T '30.11' 'signalling.light' 'nbv0.5scaffold1361_89077-96955' '(at3g18890 : 393.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G34460.1); Has 26348 Blast hits to 17063 proteins in 1661 species: Archae - 97; Bacteria - 5228; Metazoa - 9723; Fungi - 4680; Plants - 1695; Viruses - 652; Other Eukaryotes - 4273 (source: NCBI BLink). & (gnl|cdd|36417 : 198.0) no description available & (reliability: 786.0) & (original description: Putative TIC62, Description = Protein TIC 62, chloroplastic, PFAM = PF13460)' T '30.11' 'signalling.light' 'nbv0.5scaffold1698_83371-87592' '(at5g66560 : 688.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT3G50840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5ks50|nph3_orysa : 301.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 276.0) no description available & (reliability: 1376.0) & (original description: Putative At5g66560, Description = BTB/POZ domain-containing protein At5g66560, PFAM = PF00651;PF03000)' T '30.11' 'signalling.light' 'nbv0.5scaffold1895_156554-180562' '(at4g38170 : 536.0) FAR1-related sequence 9 (FRS9); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PMZ-type (InterPro:IPR006564), MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 5 (TAIR:AT4G38180.1); Has 1073 Blast hits to 1051 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 2; Plants - 1067; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1060.0) & (original description: Putative FRS9, Description = Protein FAR1-RELATED SEQUENCE 9, PFAM = PF04434;PF10551)' T '30.11' 'signalling.light' 'nbv0.5scaffold2154_38883-44134' '(at4g29080 : 213.0) phytochrome-associated protein 2 (PAP2); phytochrome-associated protein 2 (PAP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of translation; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 8 (TAIR:AT2G22670.4); Has 2237 Blast hits to 2234 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 2235; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66035 : 177.0) no description available & (q6at33|iaa19_orysa : 167.0) Auxin-responsive protein IAA19 (Indoleacetic acid-induced protein 19) - Oryza sativa (Rice) & (reliability: 426.0) & (original description: Putative AUX6, Description = Auxin-responsive protein, PFAM = PF02309)' T '30.11' 'signalling.light' 'nbv0.5scaffold2186_288879-292637' '(gnl|cdd|68427 : 216.0) no description available & (at3g04510 : 207.0) LIGHT SENSITIVE HYPOCOTYLS 2 (LSH2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT5G28490.1); Has 309 Blast hits to 309 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative LSH2, Description = Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 2, PFAM = PF04852)' T '30.11' 'signalling.light' 'nbv0.5scaffold2492_28604-32157' '(at5g04190 : 84.0) Encodes phytochrome kinase substrate 4, a phytochrome signaling component involved in phototropism.; phytochrome kinase substrate 4 (PKS4); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative PGSC0003DMG400028120, Description = Phytochrome kinase substrate-related family protein, PFAM = )' T '30.11' 'signalling.light' 'nbv0.5scaffold2749_98679-119118' '(at1g25540 : 537.0) Encodes a nuclear protein that acts in a phyB pathway (but downstream of phyB) and induces flowering in response to suboptimal light conditions. Mutants are hypo-responsive to far-red and hyper-responsive to red light and flower late under long day conditions. Also shown to be a Mediator subunit regulating jasmonate-dependent defense.; PHYTOCHROME AND FLOWERING TIME 1 (PFT1); FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: in 8 processes; LOCATED IN: mediator complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med25, von Willebrand factor type A (InterPro:IPR021419); Has 143907 Blast hits to 47238 proteins in 2114 species: Archae - 36; Bacteria - 15136; Metazoa - 49480; Fungi - 14034; Plants - 10447; Viruses - 822; Other Eukaryotes - 53952 (source: NCBI BLink). & (reliability: 1074.0) & (original description: Putative BnaCnng04590D, Description = BnaCnng04590D protein, PFAM = PF11265)' T '30.11' 'signalling.light' 'nbv0.5scaffold3251_44596-49368' '(at2g46340 : 297.0) Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA1 is a PHYA signaling intermediate, putative regulator of PHYA signaling pathway. Light responsive repressor of photomorphogenesis. Involved in regulating circadian rhythms and flowering time in plants. Under constant light, the abundance of SPA1 protein exhibited circadian regulation, whereas under constant darkness, SPA1 protein levels remained unchanged. In addition, the spa1-3 mutation slightly shortened circadian period of CCA1, TOC1/PRR1 and SPA1 transcript accumulation under constant light.; SUPPRESSOR OF PHYA-105 1 (SPA1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), Protein kinase, catalytic domain (InterPro:IPR000719), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA1-related 2 (TAIR:AT4G11110.1); Has 31438 Blast hits to 19748 proteins in 684 species: Archae - 32; Bacteria - 4770; Metazoa - 12431; Fungi - 6743; Plants - 3442; Viruses - 2; Other Eukaryotes - 4018 (source: NCBI BLink). & (p93471|cop1_pea : 179.0) E3 ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive photomorphogenesis protein 1) - Pisum sativum (Garden pea) & (reliability: 594.0) & (original description: Putative cop1, Description = E3 ubiquitin-protein ligase RFWD2, PFAM = PF00400)' T '30.11' 'signalling.light' 'nbv0.5scaffold3582_207683-222736' '(at2g43280 : 186.0) Far-red impaired responsive (FAR1) family protein; CONTAINS InterPro DOMAIN/s: Transcription factor, FAR1-related (InterPro:IPR004330); BEST Arabidopsis thaliana protein match is: Far-red impaired responsive (FAR1) family protein (TAIR:AT3G07500.1); Has 806 Blast hits to 746 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 806; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86237 : 102.0) no description available & (reliability: 372.0) & (original description: Putative At2g43280, Description = Far-red impaired responsive 1-like protein, PFAM = PF03101)' T '30.11' 'signalling.light' 'nbv0.5scaffold4798_100321-108754' '(at4g11110 : 672.0) Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA2 primarily regulates seedling development in darkness and has little function in light-grown seedlings or adult plants.; SPA1-related 2 (SPA2); FUNCTIONS IN: protein binding, signal transducer activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), Protein kinase, catalytic domain (InterPro:IPR000719), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA (suppressor of phyA-105) protein family (TAIR:AT2G46340.1); Has 34047 Blast hits to 20982 proteins in 883 species: Archae - 38; Bacteria - 5461; Metazoa - 12841; Fungi - 7307; Plants - 4015; Viruses - 10; Other Eukaryotes - 4375 (source: NCBI BLink). & (p93471|cop1_pea : 250.0) E3 ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive photomorphogenesis protein 1) - Pisum sativum (Garden pea) & (gnl|cdd|29257 : 111.0) no description available & (gnl|cdd|36251 : 109.0) no description available & (reliability: 1344.0) & (original description: Putative SPA1, Description = Protein SUPPRESSOR OF PHYA-105 1, PFAM = PF00400)' T '30.11' 'signalling.light' 'nbv0.5scaffold5539_97579-103390' '(at3g59470 : 253.0) Far-red impaired responsive (FAR1) family protein; INVOLVED IN: response to red or far red light; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, FAR1-related (InterPro:IPR004330); BEST Arabidopsis thaliana protein match is: Far-red impaired responsive (FAR1) family protein (TAIR:AT3G07500.1). & (gnl|cdd|86237 : 111.0) no description available & (reliability: 506.0) & (original description: Putative BnaC06g17370D, Description = BnaC06g17370D protein, PFAM = PF03101)' T '30.11' 'signalling.light' 'nbv0.5scaffold5986_43483-47108' '(at4g17230 : 608.0) Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family.; SCARECROW-like 13 (SCL13); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: scarecrow-like 5 (TAIR:AT1G50600.1); Has 2512 Blast hits to 2467 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 516.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 335.0) no description available & (reliability: 1216.0) & (original description: Putative SCL13, Description = Scarecrow-like protein 13, PFAM = PF03514)' T '30.11' 'signalling.light' 'nbv0.5scaffold7219_62266-67516' '(at1g53090 : 560.0) Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA4 (and SPA3) predominantly regulates elongation growth in adult plants.; SPA1-related 4 (SPA4); FUNCTIONS IN: protein binding, signal transducer activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), Protein kinase, catalytic domain (InterPro:IPR000719), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA1-related 3 (TAIR:AT3G15354.1); Has 39467 Blast hits to 23259 proteins in 713 species: Archae - 38; Bacteria - 5854; Metazoa - 15099; Fungi - 8579; Plants - 4750; Viruses - 0; Other Eukaryotes - 5147 (source: NCBI BLink). & (p93471|cop1_pea : 176.0) E3 ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive photomorphogenesis protein 1) - Pisum sativum (Garden pea) & (gnl|cdd|36251 : 129.0) no description available & (reliability: 1120.0) & (original description: Putative SPA4, Description = Protein SPA1-RELATED 4, PFAM = PF00400)' T '30.11' 'signalling.light' 'nbv0.5scaffold8602_8689-11137' '(at5g03250 : 94.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G30440.1); Has 979 Blast hits to 958 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 98; Fungi - 0; Plants - 876; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66659 : 90.7) no description available & (reliability: 188.0) & (original description: Putative BZIP22, Description = Phototropic-responsive NPH3 family protein, PFAM = PF03000;PF03000)' T '30.11' 'signalling.light' 'niben044scf00000420ctg009_1-3499' '(at2g02710 : 322.0) Encodes a putative blue light receptor protein.; PAS/LOV PROTEIN C (PLPC); FUNCTIONS IN: two-component sensor activity, signal transducer activity; INVOLVED IN: signal transduction, regulation of transcription, DNA-dependent, two-component signal transduction system (phosphorelay); LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700); BEST Arabidopsis thaliana protein match is: phototropin 2 (TAIR:AT5G58140.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 644.0) & (original description: Putative PAC, Description = PAC motif-containing protein, PFAM = PF13426;PF13426)' T '30.11' 'signalling.light' 'niben044scf00001800ctg008_666-9108' '(at1g25540 : 179.0) Encodes a nuclear protein that acts in a phyB pathway (but downstream of phyB) and induces flowering in response to suboptimal light conditions. Mutants are hypo-responsive to far-red and hyper-responsive to red light and flower late under long day conditions. Also shown to be a Mediator subunit regulating jasmonate-dependent defense.; PHYTOCHROME AND FLOWERING TIME 1 (PFT1); FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: in 8 processes; LOCATED IN: mediator complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med25, von Willebrand factor type A (InterPro:IPR021419); Has 143907 Blast hits to 47238 proteins in 2114 species: Archae - 36; Bacteria - 15136; Metazoa - 49480; Fungi - 14034; Plants - 10447; Viruses - 822; Other Eukaryotes - 53952 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative PGSC0003DMG401000817, Description = Mediator complex, subunit Med25, von Willebrand factor type A, PFAM = )' T '30.11' 'signalling.light' 'niben044scf00005441ctg012_13720-19594' '(at4g08920 : 812.0) Encodes CRY1, a flavin-type blue-light photoreceptor with ATP binding and autophosphorylation activity. Functions in perception of blue / green ratio of light. The photoreceptor may be involved in electron transport. Mutant phenotype displays a blue light-dependent inhibition of hypocotyl elongation. Photoreceptor activity requires light-induced homodimerisation of the N-terminal CNT1 domains of CRY1. Involved in blue-light induced stomatal opening. The C-terminal domain of the protein undergoes a light dependent conformational change. Also involved in response to circadian rhythm. Mutants exhibit long hypocotyl under blue light and are out of phase in their response to circadian rhythm. CRY1 is present in the nucleus and cytoplasm. Different subcellular pools of CRY1 have different functions during photomorphogenesis of Arabidopsis seedlings.; cryptochrome 1 (CRY1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal (InterPro:IPR018394), DNA photolyase, N-terminal (InterPro:IPR006050), Cryptochrome C-terminal (InterPro:IPR020978), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101), Cryptochrome, plant (InterPro:IPR014134), Cryptochrome/DNA photolyase, class 1 (InterPro:IPR002081); BEST Arabidopsis thaliana protein match is: cryptochrome 2 (TAIR:AT1G04400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p40115|phr1_sinal : 492.0) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA photolyase) (Photoreactivating enzyme) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|35355 : 405.0) no description available & (gnl|cdd|86321 : 329.0) no description available & (reliability: 1624.0) & (original description: Putative cry1, Description = Cryptochrome 1, PFAM = PF00875;PF00875;PF12546;PF03441)' T '30.11' 'signalling.light' 'niben044scf00008775ctg007_5925-14374' '(at4g38180 : 790.0) FAR1-related sequence 5 (FRS5); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 3 (TAIR:AT2G27110.2); Has 1793 Blast hits to 1580 proteins in 47 species: Archae - 2; Bacteria - 0; Metazoa - 4; Fungi - 136; Plants - 1646; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|86237 : 121.0) no description available & (reliability: 1580.0) & (original description: Putative FRS5, Description = Protein FAR1-RELATED SEQUENCE 5, PFAM = PF10551;PF04434;PF03101)' T '30.11' 'signalling.light' 'niben044scf00009259ctg001_1-4121' '(at2g02710 : 209.0) Encodes a putative blue light receptor protein.; PAS/LOV PROTEIN C (PLPC); FUNCTIONS IN: two-component sensor activity, signal transducer activity; INVOLVED IN: signal transduction, regulation of transcription, DNA-dependent, two-component signal transduction system (phosphorelay); LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700); BEST Arabidopsis thaliana protein match is: phototropin 2 (TAIR:AT5G58140.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 418.0) & (original description: Putative FBX4, Description = Putative LOV domain-containing protein, PFAM = PF13426)' T '30.11' 'signalling.light' 'niben044scf00009404ctg003_3893-9762' '(at5g67385 : 767.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT3G49970.1); Has 920 Blast hits to 899 proteins in 47 species: Archae - 0; Bacteria - 4; Metazoa - 39; Fungi - 6; Plants - 863; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q5ks50|nph3_orysa : 335.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 291.0) no description available & (reliability: 1534.0) & (original description: Putative At5g67385, Description = BTB/POZ domain-containing protein At5g67385, PFAM = PF00651;PF03000)' T '30.11' 'signalling.light' 'niben044scf00010336ctg017_1-4408' '(at4g18810 : 241.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (InterPro:IPR013857), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: high chlorophyll fluorescence phenotype 173 (TAIR:AT1G16720.1). & (gnl|cdd|36417 : 82.0) no description available & (reliability: 482.0) & (original description: Putative apha_01567, Description = NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30, PFAM = PF08547)' T '30.11' 'signalling.light' 'niben044scf00012724ctg010_4851-8644' '(at5g66560 : 698.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT3G50840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5ks50|nph3_orysa : 298.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 277.0) no description available & (reliability: 1396.0) & (original description: Putative At5g66560, Description = BTB/POZ domain-containing protein At5g66560, PFAM = PF03000;PF00651)' T '30.11' 'signalling.light' 'niben044scf00012920ctg010_736-4929' '(at3g55850 : 239.0) Encodes a product that might regulate nucleo-cytoplasmic trafficking of an intermediate(s) involved in phyA signal transduction. Differs from isoform 2 only in the first few N-terminal amino acids.; LONG AFTER FAR-RED 3 (LAF3); FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds; INVOLVED IN: biological_process unknown; LOCATED IN: perinuclear region of cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amidohydrolase 3 (InterPro:IPR013108), Metal-dependent hydrolase, composite domain (InterPro:IPR011059); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30043 : 161.0) no description available & (reliability: 478.0) & (original description: Putative LAF3, Description = Putative amidohydrolase ytcJ, PFAM = PF07969)' T '30.11' 'signalling.light' 'niben044scf00013020ctg013_4768-6449' '(at4g38180 : 118.0) FAR1-related sequence 5 (FRS5); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 3 (TAIR:AT2G27110.2); Has 1793 Blast hits to 1580 proteins in 47 species: Archae - 2; Bacteria - 0; Metazoa - 4; Fungi - 136; Plants - 1646; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative , Description = , PFAM = PF10551)' T '30.11' 'signalling.light' 'niben044scf00013974ctg007_3314-11428' '(at3g22380 : 186.0) Encodes a nucleus-acting plant-specific clock regulator working close to the central oscillator and affecting the circadian gating of light responses. Circadian gating is the alteration of circadian phase according to the photoperiod of the entraining day/light cycle and the rhythmic antagonism of light responses in the early subjective night. TIC differentially regulates CCA1 and PRR9 from LHY, with LHY expression as a dominant genetic target of TIC action.; TIME FOR COFFEE (TIC); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of circadian rhythm; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: TIC-like (TAIR:AT3G63180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative TIC, Description = Protein TIME FOR COFFEE, PFAM = )' T '30.11' 'signalling.light' 'niben044scf00014422ctg014_1668-9441' '(at2g21150 : 437.0) XAP5 family protein involved in light regulation of the circadian clock and photomorphogenesis. Nuclear localized.; XAP5 CIRCADIAN TIMEKEEPER (XCT); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of circadian rhythm, response to blue light, response to red light, regulation of photomorphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: XAP5 protein (InterPro:IPR007005); Has 1721 Blast hits to 1474 proteins in 237 species: Archae - 2; Bacteria - 40; Metazoa - 614; Fungi - 190; Plants - 85; Viruses - 22; Other Eukaryotes - 768 (source: NCBI BLink). & (gnl|cdd|38105 : 369.0) no description available & (gnl|cdd|68493 : 294.0) no description available & (reliability: 874.0) & (original description: Putative XCT, Description = Protein XAP5 CIRCADIAN TIMEKEEPER, PFAM = PF04921)' T '30.11' 'signalling.light' 'niben044scf00015230ctg008_1519-9747' '(at3g22380 : 296.0) Encodes a nucleus-acting plant-specific clock regulator working close to the central oscillator and affecting the circadian gating of light responses. Circadian gating is the alteration of circadian phase according to the photoperiod of the entraining day/light cycle and the rhythmic antagonism of light responses in the early subjective night. TIC differentially regulates CCA1 and PRR9 from LHY, with LHY expression as a dominant genetic target of TIC action.; TIME FOR COFFEE (TIC); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of circadian rhythm; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: TIC-like (TAIR:AT3G63180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 592.0) & (original description: Putative TCM_020585, Description = Time for coffee, putative isoform 1, PFAM = )' T '30.11' 'signalling.light' 'niben044scf00015795ctg011_3020-9094' '(at5g03250 : 700.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G30440.1); Has 979 Blast hits to 958 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 98; Fungi - 0; Plants - 876; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (q5ks50|nph3_orysa : 354.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 269.0) no description available & (reliability: 1400.0) & (original description: Putative At5g03250, Description = BTB/POZ domain-containing protein At5g03250, PFAM = PF00651;PF03000)' T '30.11' 'signalling.light' 'niben044scf00016417ctg004_6557-9522' '(at5g59560 : 237.0) Encodes a novel protein conserved in higher eukaryotes. Normal function of the protein is required for normal oscillator function during circadian rhythm. Mutant analyses also suggest a role in phytochrome B (phyB)-mediated light signaling.; SENSITIVITY TO RED LIGHT REDUCED 1 (SRR1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of circadian rhythm, red, far-red light phototransduction; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sensitivity To Red Light Reduced-like, SRR1 (InterPro:IPR012942); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38341 : 164.0) no description available & (reliability: 474.0) & (original description: Putative SRR1, Description = Protein SENSITIVITY TO RED LIGHT REDUCED 1, PFAM = PF07985)' T '30.11' 'signalling.light' 'niben044scf00016517ctg000_180-6037' '(at3g08570 : 662.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT3G08660.1); Has 979 Blast hits to 951 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 96; Fungi - 0; Plants - 880; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|66659 : 259.0) no description available & (q5ks50|nph3_orysa : 217.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (reliability: 1324.0) & (original description: Putative At3g08570, Description = BTB/POZ domain-containing protein At3g08570, PFAM = PF00651;PF03000)' T '30.11' 'signalling.light' 'niben044scf00017798ctg015_7997-16707' '(at5g65540 : 468.0) unknown protein; Has 6825 Blast hits to 3811 proteins in 289 species: Archae - 0; Bacteria - 184; Metazoa - 2139; Fungi - 760; Plants - 816; Viruses - 52; Other Eukaryotes - 2874 (source: NCBI BLink). & (reliability: 936.0) & (original description: Putative TCM_000971, Description = Transcription initiation factor TFIID subunit 8, putative isoform 1, PFAM = )' T '30.11' 'signalling.light' 'niben044scf00020899ctg003_1-6240' '(at3g15354 : 810.0) Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA3 (and SPA4) predominantly regulates elongation growth in adult plants.; SPA1-related 3 (SPA3); FUNCTIONS IN: protein binding, signal transducer activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), Serine/threonine-protein kinase domain (InterPro:IPR002290), WD40 repeat (InterPro:IPR001680), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), WD40 repeat-like-containing domain (InterPro:IPR011046), Protein kinase, catalytic domain (InterPro:IPR000719), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA1-related 4 (TAIR:AT1G53090.2); Has 21839 Blast hits to 15304 proteins in 547 species: Archae - 20; Bacteria - 4030; Metazoa - 7396; Fungi - 4798; Plants - 2703; Viruses - 2; Other Eukaryotes - 2890 (source: NCBI BLink). & (p93471|cop1_pea : 311.0) E3 ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive photomorphogenesis protein 1) - Pisum sativum (Garden pea) & (gnl|cdd|36251 : 127.0) no description available & (gnl|cdd|29257 : 127.0) no description available & (reliability: 1620.0) & (original description: Putative SPA3, Description = Protein SPA1-RELATED 3, PFAM = PF00400;PF00400)' T '30.11' 'signalling.light' 'niben044scf00021109ctg010_17418-22818' '(at1g76320 : 855.0) FAR1-related sequence 4 (FRS4); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FRS (FAR1 Related Sequences) transcription factor family (TAIR:AT4G15090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86237 : 103.0) no description available & (reliability: 1710.0) & (original description: Putative FRS4, Description = Protein FAR1-RELATED SEQUENCE 4, PFAM = PF03101;PF04434;PF10551)' T '30.11' 'signalling.light' 'niben044scf00023580ctg002_4297-14692' '(at3g07500 : 221.0) Far-red impaired responsive (FAR1) family protein; CONTAINS InterPro DOMAIN/s: Transcription factor, FAR1-related (InterPro:IPR004330); BEST Arabidopsis thaliana protein match is: Far-red impaired responsive (FAR1) family protein (TAIR:AT2G43280.1); Has 895 Blast hits to 827 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 895; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86237 : 103.0) no description available & (reliability: 442.0) & (original description: Putative BnaA05g30130D, Description = BnaA05g30130D protein, PFAM = PF03101)' T '30.11' 'signalling.light' 'niben044scf00026087ctg005_25916-30425' '(at3g06250 : 903.0) FAR1-related sequence 7 (FRS7); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 12 (TAIR:AT5G18960.1); Has 2099 Blast hits to 1278 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 21; Plants - 2069; Viruses - 2; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86237 : 100.0) no description available & (reliability: 1806.0) & (original description: Putative FRS7, Description = Protein FAR1-RELATED SEQUENCE 7, PFAM = PF04434;PF03101;PF03101;PF10551)' T '30.11' 'signalling.light' 'niben044scf00028475ctg004_1744-12275' '(at1g53090 : 868.0) Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA4 (and SPA3) predominantly regulates elongation growth in adult plants.; SPA1-related 4 (SPA4); FUNCTIONS IN: protein binding, signal transducer activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), Protein kinase, catalytic domain (InterPro:IPR000719), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA1-related 3 (TAIR:AT3G15354.1); Has 39467 Blast hits to 23259 proteins in 713 species: Archae - 38; Bacteria - 5854; Metazoa - 15099; Fungi - 8579; Plants - 4750; Viruses - 0; Other Eukaryotes - 5147 (source: NCBI BLink). & (p93471|cop1_pea : 340.0) E3 ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive photomorphogenesis protein 1) - Pisum sativum (Garden pea) & (gnl|cdd|36251 : 135.0) no description available & (gnl|cdd|29257 : 129.0) no description available & (reliability: 1736.0) & (original description: Putative SPA3, Description = Protein SPA1-RELATED 3, PFAM = PF00400;PF00400)' T '30.11' 'signalling.light' 'niben044scf00036195ctg004_1504-6863' '(at2g47590 : 494.0) photolyase/blue light photoreceptor PHR2 (PHR2) mRNA,; photolyase/blue-light receptor 2 (PHR2); FUNCTIONS IN: DNA photolyase activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101); BEST Arabidopsis thaliana protein match is: cryptochrome 3 (TAIR:AT5G24850.1); Has 4854 Blast hits to 4851 proteins in 1205 species: Archae - 82; Bacteria - 2283; Metazoa - 348; Fungi - 105; Plants - 417; Viruses - 0; Other Eukaryotes - 1619 (source: NCBI BLink). & (q651u1|cryd_orysa : 212.0) Cryptochrome DASH, chloroplast/mitochondrial precursor - Oryza sativa (Rice) & (gnl|cdd|35355 : 212.0) no description available & (gnl|cdd|30764 : 159.0) no description available & (reliability: 988.0) & (original description: Putative PHR2, Description = Blue-light photoreceptor PHR2, PFAM = PF00875)' T '30.11' 'signalling.light' 'niben044scf00038623ctg007_3153-6715' '(at5g48150 : 696.0) Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway.; phytochrome a signal transduction 1 (PAT1); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 21 (TAIR:AT2G04890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 610.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 362.0) no description available & (reliability: 1392.0) & (original description: Putative PAT1, Description = Scarecrow-like transcription factor PAT1, PFAM = PF03514)' T '30.11' 'signalling.light' 'niben044scf00043014ctg003_1-6351' '(p55004|phye_iponi : 1748.0) Phytochrome E - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (at4g18130 : 1400.0) member of Histidine Kinase; phytochrome E (PHYE); FUNCTIONS IN: protein histidine kinase activity, G-protein coupled photoreceptor activity, signal transducer activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phytochrome, central region (InterPro:IPR013515), Signal transduction histidine kinase, core (InterPro:IPR005467), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Phytochrome chromophore attachment domain (InterPro:IPR016132), ATPase-like, ATP-binding domain (InterPro:IPR003594), PAS fold-2 (InterPro:IPR013654), Phytochrome A/B/C/D/E (InterPro:IPR012129), Phytochrome (InterPro:IPR001294), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Phytochrome chromophore binding site (InterPro:IPR013516), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: phytochrome B (TAIR:AT2G18790.1); Has 25391 Blast hits to 25044 proteins in 3724 species: Archae - 289; Bacteria - 19481; Metazoa - 8; Fungi - 476; Plants - 4006; Viruses - 9; Other Eukaryotes - 1122 (source: NCBI BLink). & (gnl|cdd|33974 : 347.0) no description available & (reliability: 2800.0) & (original description: Putative PHYE, Description = Phytochrome E, PFAM = PF08446;PF02518;PF01590;PF00512;PF00360;PF00989;PF00989)' T '30.11' 'signalling.light' 'niben044scf00043874ctg007_386-2939' '(at2g37680 : 177.0) CONTAINS InterPro DOMAIN/s: Vacuolar import/degradation protein Vid24 (InterPro:IPR018618); Has 318 Blast hits to 317 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 184; Plants - 51; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative , Description = L-type lectin-domain containing receptor kinase IV.1, PFAM = PF09783)' T '30.11' 'signalling.light' 'niben044scf00043990ctg003_16833-22507' '(at5g10250 : 539.0) Encodes a protein with an N-terminal BTB/POZ domain and a C-terminal NPH3 family domain. dot3 mutants have defects in shoot and primary root growth and produce an aberrant parallel venation pattern in juvenile leaves.; DEFECTIVELY ORGANIZED TRIBUTARIES 3 (DOT3); FUNCTIONS IN: signal transducer activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf primordium; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT5G64330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5ks50|nph3_orysa : 400.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 243.0) no description available & (reliability: 1078.0) & (original description: Putative DOT3, Description = BTB/POZ domain-containing protein DOT3, PFAM = PF00651;PF03000)' T '30.11' 'signalling.light' 'niben044scf00049584ctg001_3832-10846' '(at1g04400 : 707.0) Blue light receptor mediating blue-light regulated cotyledon expansion and flowering time. Positive regulator of the flowering-time gene CONSTANS. This gene possesses a light-induced CNT2 N-terminal homodimerisation domain.Involved in blue-light induced stomatal opening. Involved in triggering chromatin decondensation. An 80-residue motif (NC80) is sufficient to confer CRY2's physiological function. It is proposed that the PHR domain and the C-terminal tail of the unphosphorylated CRY2 form a "closed" conformation to suppress the NC80 motif in the absence of light. In response to blue light, the C-terminal tail of CRY2 is phosphorylated and electrostatically repelled from the surface of the PHR domain to form an "open" conformation, resulting in derepression of the NC80 motif and signal transduction to trigger photomorphogenic responses. Cry2 phosphorylation and degradation both occur in the nucleus.; cryptochrome 2 (CRY2); FUNCTIONS IN: protein homodimerization activity, blue light photoreceptor activity; INVOLVED IN: in 9 processes; LOCATED IN: nucleus, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal (InterPro:IPR018394), DNA photolyase, N-terminal (InterPro:IPR006050), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101), Cryptochrome, plant (InterPro:IPR014134), Cryptochrome/DNA photolyase, class 1 (InterPro:IPR002081); BEST Arabidopsis thaliana protein match is: cryptochrome 1 (TAIR:AT4G08920.1); Has 10129 Blast hits to 10113 proteins in 1516 species: Archae - 99; Bacteria - 3201; Metazoa - 386; Fungi - 148; Plants - 723; Viruses - 2; Other Eukaryotes - 5570 (source: NCBI BLink). & (p40115|phr1_sinal : 662.0) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA photolyase) (Photoreactivating enzyme) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|35355 : 388.0) no description available & (gnl|cdd|86321 : 322.0) no description available & (reliability: 1414.0) & (original description: Putative cry2, Description = Cryptochrome 2, PFAM = PF03441;PF00875)' T '30.11' 'signalling.light' 'niben101scf00159_815202-820394' '(at5g48130 : 597.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT4G31820.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66659 : 148.0) no description available & (q5ks50|nph3_orysa : 129.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (reliability: 1194.0) & (original description: Putative At5g48130, Description = BTB/POZ domain-containing protein At5g48130, PFAM = PF03000)' T '30.11' 'signalling.light' 'niben101scf00163_491949-501660' '(at4g38180 : 790.0) FAR1-related sequence 5 (FRS5); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 3 (TAIR:AT2G27110.2); Has 1793 Blast hits to 1580 proteins in 47 species: Archae - 2; Bacteria - 0; Metazoa - 4; Fungi - 136; Plants - 1646; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|86237 : 121.0) no description available & (reliability: 1580.0) & (original description: Putative FRS5, Description = Protein FAR1-RELATED SEQUENCE 5, PFAM = PF03101;PF10551;PF04434)' T '30.11' 'signalling.light' 'niben101scf00170_589721-603626' '(at3g45780 : 1314.0) Blue-light photoreceptor. Contains a light activated serine-threonine kinase domain and LOV1 and LOV2 repeats. Mutants are defective in blue-light response. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT1 undergoes blue-light-dependent autophosphorylation. At least eight phosphorylation sites have been identified in PHOT1. Phosphorylation of serine851 in the activation loop of PHOT1 appears to be required for stomatal opening, chloroplast accumulation, leaf flattening, and phototropism, and phosphorylation of serine849 may also contribute to the regulation of these responses. Phosphorylation-dependent binding of 14-3-3 proteins to the Hinge1 region of PHOT1 appears to require serine350 and serine376.; phototropin 1 (PHOT1); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, FMN binding, kinase activity, blue light photoreceptor activity; INVOLVED IN: in 8 processes; LOCATED IN: internal side of plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: phototropin 2 (TAIR:AT5G58140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35830 : 448.0) no description available & (p15792|kpk1_phavu : 321.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|29142 : 257.0) no description available & (reliability: 2628.0) & (original description: Putative PHOT1, Description = Phototropin-1, PFAM = PF00069;PF13426;PF13426)' T '30.11' 'signalling.light' 'niben101scf00176_224582-228656' '(at3g22104 : 311.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT3G19850.1); Has 844 Blast hits to 828 proteins in 39 species: Archae - 0; Bacteria - 4; Metazoa - 27; Fungi - 3; Plants - 786; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|66659 : 169.0) no description available & (q5ks50|nph3_orysa : 93.6) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (reliability: 622.0) & (original description: Putative At3g22104, Description = BTB/POZ domain-containing protein At3g22104, PFAM = PF03000)' T '30.11' 'signalling.light' 'niben101scf00217_209868-218077' '(at3g59470 : 277.0) Far-red impaired responsive (FAR1) family protein; INVOLVED IN: response to red or far red light; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, FAR1-related (InterPro:IPR004330); BEST Arabidopsis thaliana protein match is: Far-red impaired responsive (FAR1) family protein (TAIR:AT3G07500.1). & (gnl|cdd|86237 : 111.0) no description available & (reliability: 554.0) & (original description: Putative FRS5, Description = Protein FAR1-RELATED SEQUENCE 5, PFAM = PF03101)' T '30.11' 'signalling.light' 'niben101scf00217_209931-241454' '(at3g59470 : 199.0) Far-red impaired responsive (FAR1) family protein; INVOLVED IN: response to red or far red light; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, FAR1-related (InterPro:IPR004330); BEST Arabidopsis thaliana protein match is: Far-red impaired responsive (FAR1) family protein (TAIR:AT3G07500.1). & (gnl|cdd|86237 : 112.0) no description available & (reliability: 398.0) & (original description: Putative FRS5, Description = Protein FAR1-RELATED SEQUENCE 5, PFAM = PF03101)' T '30.11' 'signalling.light' 'niben101scf00217_253878-258876' '(at2g43280 : 132.0) Far-red impaired responsive (FAR1) family protein; CONTAINS InterPro DOMAIN/s: Transcription factor, FAR1-related (InterPro:IPR004330); BEST Arabidopsis thaliana protein match is: Far-red impaired responsive (FAR1) family protein (TAIR:AT3G07500.1); Has 806 Blast hits to 746 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 806; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative At2g43280, Description = Far-red impaired responsive 1-like protein, PFAM = PF03101)' T '30.11' 'signalling.light' 'niben101scf00271_539727-544139' '(at1g55080 : 118.0) MED9; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G29580.1); Has 67203 Blast hits to 25757 proteins in 1293 species: Archae - 12; Bacteria - 4374; Metazoa - 24340; Fungi - 7940; Plants - 5927; Viruses - 273; Other Eukaryotes - 24337 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative MED9, Description = Mediator of RNA polymerase II transcription subunit 9, PFAM = )' T '30.11' 'signalling.light' 'niben101scf00318_5494-7958' '(gnl|cdd|70474 : 84.7) no description available & (at2g40080 : 80.9) Encodes a novel nuclear 111 amino-acid phytochrome-regulated component of a negative feedback loop involving the circadian clock central oscillator components CCA1 and LHY. ELF4 is necessary for light-induced expression of both CCA1 and LHY, and conversely, CCA1 and LHY act negatively on light-induced ELF4 expression. ELF4 promotes clock accuracy and is required for sustained rhythms in the absence of daily light/dark cycles. It is involved in the phyB-mediated constant red light induced seedling de-etiolation process and may function to coregulate the expression of a subset of phyB-regulated genes.; EARLY FLOWERING 4 (ELF4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1313 (InterPro:IPR009741); BEST Arabidopsis thaliana protein match is: ELF4-like 1 (TAIR:AT2G29950.1); Has 150 Blast hits to 149 proteins in 35 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 146; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative ELF4, Description = Protein EARLY FLOWERING 4, PFAM = PF07011)' T '30.11' 'signalling.light' 'niben101scf00470_348918-355789' '(at2g46340 : 776.0) Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA1 is a PHYA signaling intermediate, putative regulator of PHYA signaling pathway. Light responsive repressor of photomorphogenesis. Involved in regulating circadian rhythms and flowering time in plants. Under constant light, the abundance of SPA1 protein exhibited circadian regulation, whereas under constant darkness, SPA1 protein levels remained unchanged. In addition, the spa1-3 mutation slightly shortened circadian period of CCA1, TOC1/PRR1 and SPA1 transcript accumulation under constant light.; SUPPRESSOR OF PHYA-105 1 (SPA1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), Protein kinase, catalytic domain (InterPro:IPR000719), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA1-related 2 (TAIR:AT4G11110.1); Has 31438 Blast hits to 19748 proteins in 684 species: Archae - 32; Bacteria - 4770; Metazoa - 12431; Fungi - 6743; Plants - 3442; Viruses - 2; Other Eukaryotes - 4018 (source: NCBI BLink). & (p93471|cop1_pea : 335.0) E3 ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive photomorphogenesis protein 1) - Pisum sativum (Garden pea) & (gnl|cdd|29257 : 113.0) no description available & (gnl|cdd|36251 : 101.0) no description available & (reliability: 1552.0) & (original description: Putative SPA1, Description = Protein SUPPRESSOR OF PHYA-105 1, PFAM = PF00400;PF00400)' T '30.11' 'signalling.light' 'niben101scf00573_593896-596273' '(gnl|cdd|70474 : 87.8) no description available & (at2g40080 : 80.5) Encodes a novel nuclear 111 amino-acid phytochrome-regulated component of a negative feedback loop involving the circadian clock central oscillator components CCA1 and LHY. ELF4 is necessary for light-induced expression of both CCA1 and LHY, and conversely, CCA1 and LHY act negatively on light-induced ELF4 expression. ELF4 promotes clock accuracy and is required for sustained rhythms in the absence of daily light/dark cycles. It is involved in the phyB-mediated constant red light induced seedling de-etiolation process and may function to coregulate the expression of a subset of phyB-regulated genes.; EARLY FLOWERING 4 (ELF4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1313 (InterPro:IPR009741); BEST Arabidopsis thaliana protein match is: ELF4-like 1 (TAIR:AT2G29950.1); Has 150 Blast hits to 149 proteins in 35 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 146; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative EFL1, Description = Early flowering 4, PFAM = PF07011)' T '30.11' 'signalling.light' 'niben101scf00698_202786-207354' '(at2g43010 : 149.0) Isolated as a semidominant mutation defective in red -light responses. Encodes a nuclear localized bHLH protein that interacts with active PhyB protein. Negatively regulates phyB mediated red light responses. Involved in shade avoidance response. Protein abundance is negatively regulated by PhyB.; phytochrome interacting factor 4 (PIF4); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome interacting factor 3-like 6 (TAIR:AT3G59060.1); Has 4535 Blast hits to 4529 proteins in 355 species: Archae - 0; Bacteria - 0; Metazoa - 936; Fungi - 188; Plants - 3370; Viruses - 2; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative bHLH7, Description = Putative HLH DNA-binding domain superfamily protein, PFAM = PF00010)' T '30.11' 'signalling.light' 'niben101scf00765_222204-226121' '(at5g17580 : 368.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, sepal; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT3G03510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66659 : 204.0) no description available & (q5ks50|nph3_orysa : 173.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (reliability: 736.0) & (original description: Putative At5g17580, Description = BTB/POZ domain-containing protein At5g17580, PFAM = PF03000)' T '30.11' 'signalling.light' 'niben101scf00783_519954-526100' '(at5g10250 : 557.0) Encodes a protein with an N-terminal BTB/POZ domain and a C-terminal NPH3 family domain. dot3 mutants have defects in shoot and primary root growth and produce an aberrant parallel venation pattern in juvenile leaves.; DEFECTIVELY ORGANIZED TRIBUTARIES 3 (DOT3); FUNCTIONS IN: signal transducer activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf primordium; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT5G64330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5ks50|nph3_orysa : 430.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 254.0) no description available & (reliability: 1114.0) & (original description: Putative DOT3, Description = BTB/POZ domain-containing protein DOT3, PFAM = PF00651;PF03000)' T '30.11' 'signalling.light' 'niben101scf00858_291087-294835' '(q69vg1|cigr1_orysa : 590.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (at5g48150 : 486.0) Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway.; phytochrome a signal transduction 1 (PAT1); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 21 (TAIR:AT2G04890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67150 : 314.0) no description available & (reliability: 972.0) & (original description: Putative CIGR1, Description = Chitin-inducible gibberellin-responsive protein 1, PFAM = PF03514)' T '30.11' 'signalling.light' 'niben101scf00928_63635-66471' '(at5g59560 : 242.0) Encodes a novel protein conserved in higher eukaryotes. Normal function of the protein is required for normal oscillator function during circadian rhythm. Mutant analyses also suggest a role in phytochrome B (phyB)-mediated light signaling.; SENSITIVITY TO RED LIGHT REDUCED 1 (SRR1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of circadian rhythm, red, far-red light phototransduction; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sensitivity To Red Light Reduced-like, SRR1 (InterPro:IPR012942); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38341 : 180.0) no description available & (reliability: 484.0) & (original description: Putative SRR1, Description = Protein SENSITIVITY TO RED LIGHT REDUCED 1, PFAM = PF07985)' T '30.11' 'signalling.light' 'niben101scf01005_167366-172036' '(at5g64330 : 944.0) Involved in blue light response signaling pathway; interacts with the blue light photoreceptor NPH1.Null mutations abolish phototrophic responses of etiolated seedlings to low fluence blue light. Protein contains multiple protein-protein interaction domains.; NON-PHOTOTROPIC HYPOCOTYL 3 (NPH3); CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G30440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5ks50|nph3_orysa : 779.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 306.0) no description available & (reliability: 1888.0) & (original description: Putative CPT1, Description = Coleoptile phototropism protein 1, PFAM = PF03000)' T '30.11' 'signalling.light' 'niben101scf01018_126800-132254' '(at5g48800 : 802.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT3G08570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5ks50|nph3_orysa : 310.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 273.0) no description available & (reliability: 1604.0) & (original description: Putative At5g48800, Description = BTB/POZ domain-containing protein At5g48800, PFAM = PF03000;PF00651)' T '30.11' 'signalling.light' 'niben101scf01085_166317-171009' '(at2g30520 : 837.0) light inducible root phototropism 2 encoding a signal transducer of the phototropic response in Arabidopsis; ROOT PHOTOTROPISM 2 (RPT2); FUNCTIONS IN: signal transducer activity; INVOLVED IN: phototropism; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT5G67385.1); Has 865 Blast hits to 833 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 860; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q5ks50|nph3_orysa : 281.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 256.0) no description available & (reliability: 1674.0) & (original description: Putative RPT2, Description = Root phototropism protein 2, PFAM = PF03000;PF00651)' T '30.11' 'signalling.light' 'niben101scf01115_79320-83994' '(at2g47590 : 502.0) photolyase/blue light photoreceptor PHR2 (PHR2) mRNA,; photolyase/blue-light receptor 2 (PHR2); FUNCTIONS IN: DNA photolyase activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101); BEST Arabidopsis thaliana protein match is: cryptochrome 3 (TAIR:AT5G24850.1); Has 4854 Blast hits to 4851 proteins in 1205 species: Archae - 82; Bacteria - 2283; Metazoa - 348; Fungi - 105; Plants - 417; Viruses - 0; Other Eukaryotes - 1619 (source: NCBI BLink). & (gnl|cdd|35355 : 219.0) no description available & (q651u1|cryd_orysa : 210.0) Cryptochrome DASH, chloroplast/mitochondrial precursor - Oryza sativa (Rice) & (gnl|cdd|30764 : 160.0) no description available & (reliability: 1004.0) & (original description: Putative PHR2, Description = Blue-light photoreceptor PHR2, PFAM = PF00875)' T '30.11' 'signalling.light' 'niben101scf01124_1632082-1637063' '(at4g15090 : 1031.0) Encodes a nuclear localized protein involved in far red light response signaling. Loss of function mutants are defective in far red light responses. Interacts with homologous gene FHY3.; FAR-RED IMPAIRED RESPONSE 1 (FAR1); CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: far-red elongated hypocotyls 3 (TAIR:AT3G22170.2); Has 1639 Blast hits to 1460 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 107; Plants - 1519; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|86237 : 108.0) no description available & (reliability: 2062.0) & (original description: Putative FAR1, Description = Protein FAR-RED IMPAIRED RESPONSE 1, PFAM = PF04434;PF10551;PF03101)' T '30.11' 'signalling.light' 'niben101scf01131_20801-26489' '(at5g67385 : 655.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT3G49970.1); Has 920 Blast hits to 899 proteins in 47 species: Archae - 0; Bacteria - 4; Metazoa - 39; Fungi - 6; Plants - 863; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q5ks50|nph3_orysa : 303.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 257.0) no description available & (reliability: 1310.0) & (original description: Putative At5g67385, Description = BTB/POZ domain-containing protein At5g67385, PFAM = PF03000;PF00651)' T '30.11' 'signalling.light' 'niben101scf01142_12492-16751' '(at1g80010 : 486.0) FAR1-related sequence 8 (FRS8); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 6 (TAIR:AT1G52520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86237 : 97.3) no description available & (reliability: 972.0) & (original description: Putative FRS6, Description = Protein FAR1-RELATED SEQUENCE 6, PFAM = PF03101;PF10551;PF04434)' T '30.11' 'signalling.light' 'niben101scf01154_218081-241688' '(at3g45780 : 1316.0) Blue-light photoreceptor. Contains a light activated serine-threonine kinase domain and LOV1 and LOV2 repeats. Mutants are defective in blue-light response. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT1 undergoes blue-light-dependent autophosphorylation. At least eight phosphorylation sites have been identified in PHOT1. Phosphorylation of serine851 in the activation loop of PHOT1 appears to be required for stomatal opening, chloroplast accumulation, leaf flattening, and phototropism, and phosphorylation of serine849 may also contribute to the regulation of these responses. Phosphorylation-dependent binding of 14-3-3 proteins to the Hinge1 region of PHOT1 appears to require serine350 and serine376.; phototropin 1 (PHOT1); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, FMN binding, kinase activity, blue light photoreceptor activity; INVOLVED IN: in 8 processes; LOCATED IN: internal side of plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: phototropin 2 (TAIR:AT5G58140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35830 : 446.0) no description available & (p15792|kpk1_phavu : 322.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|29142 : 257.0) no description available & (reliability: 2632.0) & (original description: Putative PHOT1, Description = Phototropin-1, PFAM = PF00069;PF13426;PF13426)' T '30.11' 'signalling.light' 'niben101scf01167_544124-550053' '(at4g08920 : 956.0) Encodes CRY1, a flavin-type blue-light photoreceptor with ATP binding and autophosphorylation activity. Functions in perception of blue / green ratio of light. The photoreceptor may be involved in electron transport. Mutant phenotype displays a blue light-dependent inhibition of hypocotyl elongation. Photoreceptor activity requires light-induced homodimerisation of the N-terminal CNT1 domains of CRY1. Involved in blue-light induced stomatal opening. The C-terminal domain of the protein undergoes a light dependent conformational change. Also involved in response to circadian rhythm. Mutants exhibit long hypocotyl under blue light and are out of phase in their response to circadian rhythm. CRY1 is present in the nucleus and cytoplasm. Different subcellular pools of CRY1 have different functions during photomorphogenesis of Arabidopsis seedlings.; cryptochrome 1 (CRY1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal (InterPro:IPR018394), DNA photolyase, N-terminal (InterPro:IPR006050), Cryptochrome C-terminal (InterPro:IPR020978), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101), Cryptochrome, plant (InterPro:IPR014134), Cryptochrome/DNA photolyase, class 1 (InterPro:IPR002081); BEST Arabidopsis thaliana protein match is: cryptochrome 2 (TAIR:AT1G04400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p40115|phr1_sinal : 596.0) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA photolyase) (Photoreactivating enzyme) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|35355 : 485.0) no description available & (gnl|cdd|86321 : 330.0) no description available & (reliability: 1912.0) & (original description: Putative cry1, Description = Cryptochrome 1, PFAM = PF03441;PF12546;PF00875)' T '30.11' 'signalling.light' 'niben101scf01175_515010-524152' '(at1g53090 : 900.0) Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA4 (and SPA3) predominantly regulates elongation growth in adult plants.; SPA1-related 4 (SPA4); FUNCTIONS IN: protein binding, signal transducer activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), Protein kinase, catalytic domain (InterPro:IPR000719), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA1-related 3 (TAIR:AT3G15354.1); Has 39467 Blast hits to 23259 proteins in 713 species: Archae - 38; Bacteria - 5854; Metazoa - 15099; Fungi - 8579; Plants - 4750; Viruses - 0; Other Eukaryotes - 5147 (source: NCBI BLink). & (p93471|cop1_pea : 352.0) E3 ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive photomorphogenesis protein 1) - Pisum sativum (Garden pea) & (gnl|cdd|29257 : 132.0) no description available & (gnl|cdd|36251 : 128.0) no description available & (reliability: 1800.0) & (original description: Putative SPA3, Description = Protein SPA1-RELATED 3, PFAM = PF00400;PF00400)' T '30.11' 'signalling.light' 'niben101scf01221_596536-599639' '(gnl|cdd|67150 : 174.0) no description available & (at3g03450 : 101.0) Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.; RGA-like 2 (RGL2); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2697 Blast hits to 2637 proteins in 314 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2690; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q6ei06|gaip_cucma : 97.8) DELLA protein GAIP (Gibberellic acid-insensitive phloem protein) (GAIP) (CmGAIP) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 183.4) & (original description: Putative GRAS38, Description = GRAS family transcription factor, putative, PFAM = PF03514)' T '30.11' 'signalling.light' 'niben101scf01234_276768-280393' '(at4g17230 : 610.0) Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family.; SCARECROW-like 13 (SCL13); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: scarecrow-like 5 (TAIR:AT1G50600.1); Has 2512 Blast hits to 2467 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 520.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 340.0) no description available & (reliability: 1220.0) & (original description: Putative SCL13, Description = SCL domain class transcription factor, PFAM = PF03514)' T '30.11' 'signalling.light' 'niben101scf01258_96346-102041' '(at3g59470 : 245.0) Far-red impaired responsive (FAR1) family protein; INVOLVED IN: response to red or far red light; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, FAR1-related (InterPro:IPR004330); BEST Arabidopsis thaliana protein match is: Far-red impaired responsive (FAR1) family protein (TAIR:AT3G07500.1). & (gnl|cdd|86237 : 110.0) no description available & (reliability: 490.0) & (original description: Putative BnaC06g17370D, Description = BnaC06g17370D protein, PFAM = PF03101)' T '30.11' 'signalling.light' 'niben101scf01281_1023632-1030514' '(at1g30440 : 951.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT5G03250.1); Has 895 Blast hits to 867 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 883; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|66659 : 310.0) no description available & (q5ks50|nph3_orysa : 241.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (reliability: 1902.0) & (original description: Putative At1g30440, Description = BTB/POZ domain-containing protein At1g30440, PFAM = PF03000;PF00651)' T '30.11' 'signalling.light' 'niben101scf01365_673693-677087' '(gnl|cdd|67150 : 239.0) no description available & (at2g04890 : 190.0) Encodes a scarecrow-like protein (SCL21). Member of GRAS gene family.; SCARECROW-like 21 (SCL21); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G48150.2); Has 2478 Blast hits to 2441 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2474; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8s4w7|gai1_vitvi : 187.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 370.0) & (original description: Putative glysoja_024156, Description = DELLA protein GAI, PFAM = PF03514)' T '30.11' 'signalling.light' 'niben101scf01372_905245-908246' '(at3g22840 : 152.0) Encodes an early light-inducible protein.; EARLY LIGHT-INDUCABLE PROTEIN (ELIP1); BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT4G14690.1); Has 319 Blast hits to 319 proteins in 50 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 259; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (p11432|eli_pea : 150.0) Early light-induced protein, chloroplast precursor (ELIP) - Pisum sativum (Garden pea) & (reliability: 304.0) & (original description: Putative elip, Description = Early light-induced protein, PFAM = PF00504)' T '30.11' 'signalling.light' 'niben101scf01521_853806-860575' '(at2g02710 : 357.0) Encodes a putative blue light receptor protein.; PAS/LOV PROTEIN C (PLPC); FUNCTIONS IN: two-component sensor activity, signal transducer activity; INVOLVED IN: signal transduction, regulation of transcription, DNA-dependent, two-component signal transduction system (phosphorelay); LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700); BEST Arabidopsis thaliana protein match is: phototropin 2 (TAIR:AT5G58140.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 714.0) & (original description: Putative LLP, Description = LOV/LOV protein, PFAM = PF13426;PF13426)' T '30.11' 'signalling.light' 'niben101scf01557_117020-125545' '(at3g44820 : 727.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G30440.1); Has 907 Blast hits to 880 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi - 0; Plants - 873; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (q5ks50|nph3_orysa : 293.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 259.0) no description available & (reliability: 1454.0) & (original description: Putative At3g44820, Description = BTB/POZ domain-containing protein At3g44820, PFAM = PF00651;PF03000)' T '30.11' 'signalling.light' 'niben101scf01572_257928-268257' '(at5g03250 : 707.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G30440.1); Has 979 Blast hits to 958 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 98; Fungi - 0; Plants - 876; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (q5ks50|nph3_orysa : 353.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 264.0) no description available & (reliability: 1414.0) & (original description: Putative At5g03250, Description = BTB/POZ domain-containing protein At5g03250, PFAM = PF03000;PF00651)' T '30.11' 'signalling.light' 'niben101scf01623_1024729-1029996' '(at1g10240 : 816.0) FAR1-related sequence 11 (FRS11); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 10 (TAIR:AT5G28530.1); Has 1389 Blast hits to 1253 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 83; Plants - 1296; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|86237 : 91.5) no description available & (reliability: 1632.0) & (original description: Putative FRS11, Description = Protein FAR1-RELATED SEQUENCE 11, PFAM = PF03101;PF10551;PF04434)' T '30.11' 'signalling.light' 'niben101scf01670_518240-532366' '(at4g38180 : 1127.0) FAR1-related sequence 5 (FRS5); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 3 (TAIR:AT2G27110.2); Has 1793 Blast hits to 1580 proteins in 47 species: Archae - 2; Bacteria - 0; Metazoa - 4; Fungi - 136; Plants - 1646; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|86237 : 126.0) no description available & (reliability: 2254.0) & (original description: Putative FRS5, Description = Protein FAR1-RELATED SEQUENCE 5, PFAM = PF03101;PF04434;PF10551)' T '30.11' 'signalling.light' 'niben101scf01724_142563-147281' '(at5g64330 : 947.0) Involved in blue light response signaling pathway; interacts with the blue light photoreceptor NPH1.Null mutations abolish phototrophic responses of etiolated seedlings to low fluence blue light. Protein contains multiple protein-protein interaction domains.; NON-PHOTOTROPIC HYPOCOTYL 3 (NPH3); CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G30440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5ks50|nph3_orysa : 779.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 302.0) no description available & (reliability: 1894.0) & (original description: Putative RPT3, Description = Root phototropism protein 3, PFAM = PF00651;PF03000)' T '30.11' 'signalling.light' 'niben101scf01734_182755-193163' '(at3g07500 : 217.0) Far-red impaired responsive (FAR1) family protein; CONTAINS InterPro DOMAIN/s: Transcription factor, FAR1-related (InterPro:IPR004330); BEST Arabidopsis thaliana protein match is: Far-red impaired responsive (FAR1) family protein (TAIR:AT2G43280.1); Has 895 Blast hits to 827 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 895; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86237 : 97.7) no description available & (reliability: 434.0) & (original description: Putative BnaA05g30130D, Description = BnaA05g30130D protein, PFAM = PF03101)' T '30.11' 'signalling.light' 'niben101scf01734_200488-223272' '(at2g43280 : 182.0) Far-red impaired responsive (FAR1) family protein; CONTAINS InterPro DOMAIN/s: Transcription factor, FAR1-related (InterPro:IPR004330); BEST Arabidopsis thaliana protein match is: Far-red impaired responsive (FAR1) family protein (TAIR:AT3G07500.1); Has 806 Blast hits to 746 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 806; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86237 : 99.0) no description available & (reliability: 364.0) & (original description: Putative At2g43280, Description = Far-red impaired responsive 1-like protein, PFAM = PF03101)' T '30.11' 'signalling.light' 'niben101scf01734_246045-249368' '(at2g43280 : 119.0) Far-red impaired responsive (FAR1) family protein; CONTAINS InterPro DOMAIN/s: Transcription factor, FAR1-related (InterPro:IPR004330); BEST Arabidopsis thaliana protein match is: Far-red impaired responsive (FAR1) family protein (TAIR:AT3G07500.1); Has 806 Blast hits to 746 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 806; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86237 : 106.0) no description available & (reliability: 238.0) & (original description: Putative At2g43280, Description = Far-red impaired responsive 1-like protein, PFAM = PF03101)' T '30.11' 'signalling.light' 'niben101scf01739_345422-350089' '(at4g19990 : 141.0) FAR1-related sequence 1 (FRS1); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FRS (FAR1 Related Sequences) transcription factor family (TAIR:AT4G15090.1). & (gnl|cdd|86237 : 88.4) no description available & (reliability: 282.0) & (original description: Putative FAR1, Description = FRS (FAR1 Related Sequences) transcription factor family, PFAM = PF03101)' T '30.11' 'signalling.light' 'niben101scf01740_773191-789960' '(gnl|cdd|35740 : 521.0) no description available & (at1g67310 : 518.0) Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains; FUNCTIONS IN: calmodulin binding, transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Ankyrin repeat-containing domain (InterPro:IPR020683), CG-1 (InterPro:IPR005559), Cell surface receptor IPT/TIG (InterPro:IPR002909), Ankyrin repeat (InterPro:IPR002110), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: signal responsive 1 (TAIR:AT2G22300.2); Has 4214 Blast hits to 2978 proteins in 268 species: Archae - 9; Bacteria - 179; Metazoa - 1855; Fungi - 220; Plants - 413; Viruses - 4; Other Eukaryotes - 1534 (source: NCBI BLink). & (gnl|cdd|67472 : 119.0) no description available & (reliability: 1036.0) & (original description: Putative ER66, Description = ER66 protein, PFAM = PF03859;PF12796;PF00612;PF00612;PF01833)' T '30.11' 'signalling.light' 'niben101scf01775_125345-165473' '(p33530|phya1_tobac : 2217.0) Phytochrome A1 - Nicotiana tabacum (Common tobacco) & (at1g09570 : 1792.0) Light-labile cytoplasmic red/far-red light photoreceptor involved in the regulation of photomorphogenesis. It exists in two inter-convertible forms: Pr and Pfr (active) and functions as a dimer.The N terminus carries a single tetrapyrrole chromophore, and the C terminus is involved in dimerization. It is the sole photoreceptor mediating the FR high irradiance response (HIR). Major regulator in red-light induction of phototropic enhancement. Involved in the regulation of de-etiolation. Involved in gravitropism and phototropism. Requires FHY1 for nuclear accumulation.; phytochrome A (PHYA); CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Phytochrome, central region (InterPro:IPR013515), Signal transduction histidine kinase, core (InterPro:IPR005467), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Phytochrome chromophore attachment domain (InterPro:IPR016132), ATPase-like, ATP-binding domain (InterPro:IPR003594), PAS fold-2 (InterPro:IPR013654), Phytochrome (InterPro:IPR001294), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Phytochrome chromophore binding site (InterPro:IPR013516), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: phytochrome B (TAIR:AT2G18790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84719 : 350.0) no description available & (reliability: 3584.0) & (original description: Putative PHYA, Description = Phytochrome A, PFAM = PF02518;PF01590;PF00360;PF00512;PF08446;PF00989;PF00989)' T '30.11' 'signalling.light' 'niben101scf01785_130310-137408' '(p55004|phye_iponi : 1758.0) Phytochrome E - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (at4g18130 : 1403.0) member of Histidine Kinase; phytochrome E (PHYE); FUNCTIONS IN: protein histidine kinase activity, G-protein coupled photoreceptor activity, signal transducer activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phytochrome, central region (InterPro:IPR013515), Signal transduction histidine kinase, core (InterPro:IPR005467), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Phytochrome chromophore attachment domain (InterPro:IPR016132), ATPase-like, ATP-binding domain (InterPro:IPR003594), PAS fold-2 (InterPro:IPR013654), Phytochrome A/B/C/D/E (InterPro:IPR012129), Phytochrome (InterPro:IPR001294), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Phytochrome chromophore binding site (InterPro:IPR013516), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: phytochrome B (TAIR:AT2G18790.1); Has 25391 Blast hits to 25044 proteins in 3724 species: Archae - 289; Bacteria - 19481; Metazoa - 8; Fungi - 476; Plants - 4006; Viruses - 9; Other Eukaryotes - 1122 (source: NCBI BLink). & (gnl|cdd|33974 : 348.0) no description available & (reliability: 2806.0) & (original description: Putative PHYE, Description = Phytochrome E, PFAM = PF00989;PF00989;PF01590;PF02518;PF00512;PF00360;PF08446)' T '30.11' 'signalling.light' 'niben101scf01938_266963-270513' '(at5g04190 : 81.3) Encodes phytochrome kinase substrate 4, a phytochrome signaling component involved in phototropism.; phytochrome kinase substrate 4 (PKS4); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative PGSC0003DMG400028120, Description = Phytochrome kinase substrate-related family protein, PFAM = )' T '30.11' 'signalling.light' 'niben101scf01943_1092852-1096483' '(at5g48150 : 682.0) Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway.; phytochrome a signal transduction 1 (PAT1); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 21 (TAIR:AT2G04890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 600.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 357.0) no description available & (reliability: 1364.0) & (original description: Putative PAT1, Description = Scarecrow-like transcription factor PAT1, PFAM = PF03514)' T '30.11' 'signalling.light' 'niben101scf02048_79707-83338' '(at4g17230 : 603.0) Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family.; SCARECROW-like 13 (SCL13); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: scarecrow-like 5 (TAIR:AT1G50600.1); Has 2512 Blast hits to 2467 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 525.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 342.0) no description available & (reliability: 1206.0) & (original description: Putative SCL13, Description = Scarecrow-like protein 13, PFAM = PF03514)' T '30.11' 'signalling.light' 'niben101scf02078_533648-538971' '(at1g76320 : 856.0) FAR1-related sequence 4 (FRS4); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FRS (FAR1 Related Sequences) transcription factor family (TAIR:AT4G15090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86237 : 101.0) no description available & (reliability: 1712.0) & (original description: Putative FRS4, Description = Protein FAR1-RELATED SEQUENCE 4, PFAM = PF04434;PF03101;PF10551)' T '30.11' 'signalling.light' 'niben101scf02085_1274970-1285320' '(at2g37680 : 359.0) CONTAINS InterPro DOMAIN/s: Vacuolar import/degradation protein Vid24 (InterPro:IPR018618); Has 318 Blast hits to 317 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 184; Plants - 51; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|39835 : 124.0) no description available & (gnl|cdd|34677 : 100.0) no description available & (reliability: 718.0) & (original description: Putative , Description = L-type lectin-domain containing receptor kinase IV.1, PFAM = PF09783)' T '30.11' 'signalling.light' 'niben101scf02237_84746-89940' '(at4g38170 : 527.0) FAR1-related sequence 9 (FRS9); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PMZ-type (InterPro:IPR006564), MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 5 (TAIR:AT4G38180.1); Has 1073 Blast hits to 1051 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 2; Plants - 1067; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1028.0) & (original description: Putative FRS9, Description = Protein FAR1-RELATED SEQUENCE 9, PFAM = PF04434;PF10551)' T '30.11' 'signalling.light' 'niben101scf02323_298500-303473' '(at5g64330 : 950.0) Involved in blue light response signaling pathway; interacts with the blue light photoreceptor NPH1.Null mutations abolish phototrophic responses of etiolated seedlings to low fluence blue light. Protein contains multiple protein-protein interaction domains.; NON-PHOTOTROPIC HYPOCOTYL 3 (NPH3); CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G30440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5ks50|nph3_orysa : 779.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 306.0) no description available & (reliability: 1900.0) & (original description: Putative RPT3, Description = Root phototropism protein 3, PFAM = PF03000)' T '30.11' 'signalling.light' 'niben101scf02474_312371-320675' '(at1g52520 : 875.0) FAR1-related sequence 6 (FRS6); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 8 (TAIR:AT1G80010.1); Has 1626 Blast hits to 1478 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 91; Plants - 1518; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|86237 : 92.7) no description available & (reliability: 1750.0) & (original description: Putative FRS6, Description = Protein FAR1-RELATED SEQUENCE 6, PFAM = PF03101;PF10551;PF04434)' T '30.11' 'signalling.light' 'niben101scf02572_193509-197300' '(at4g29080 : 257.0) phytochrome-associated protein 2 (PAP2); phytochrome-associated protein 2 (PAP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of translation; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 8 (TAIR:AT2G22670.4); Has 2237 Blast hits to 2234 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 2235; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66035 : 231.0) no description available & (q5z749|iaa21_orysa : 207.0) Auxin-responsive protein IAA21 (Indoleacetic acid-induced protein 21) - Oryza sativa (Rice) & (reliability: 514.0) & (original description: Putative IAA27, Description = Auxin-responsive protein IAA27, PFAM = PF02309)' T '30.11' 'signalling.light' 'niben101scf02602_128414-164734' '(at1g53090 : 858.0) Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA4 (and SPA3) predominantly regulates elongation growth in adult plants.; SPA1-related 4 (SPA4); FUNCTIONS IN: protein binding, signal transducer activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), Protein kinase, catalytic domain (InterPro:IPR000719), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA1-related 3 (TAIR:AT3G15354.1); Has 39467 Blast hits to 23259 proteins in 713 species: Archae - 38; Bacteria - 5854; Metazoa - 15099; Fungi - 8579; Plants - 4750; Viruses - 0; Other Eukaryotes - 5147 (source: NCBI BLink). & (p93471|cop1_pea : 336.0) E3 ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive photomorphogenesis protein 1) - Pisum sativum (Garden pea) & (gnl|cdd|36251 : 134.0) no description available & (gnl|cdd|29257 : 129.0) no description available & (reliability: 1716.0) & (original description: Putative SPA3, Description = Protein SPA1-RELATED 3, PFAM = PF00400;PF00400)' T '30.11' 'signalling.light' 'niben101scf02608_367383-371616' '(at5g66560 : 689.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT3G50840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5ks50|nph3_orysa : 293.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 276.0) no description available & (reliability: 1378.0) & (original description: Putative At5g66560, Description = BTB/POZ domain-containing protein At5g66560, PFAM = PF00651;PF03000)' T '30.11' 'signalling.light' 'niben101scf02720_424806-429194' '(at1g67900 : 652.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT3G26490.1). & (q5ks50|nph3_orysa : 278.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 260.0) no description available & (reliability: 1304.0) & (original description: Putative At1g67900, Description = BTB/POZ domain-containing protein At1g67900, PFAM = PF03000)' T '30.11' 'signalling.light' 'niben101scf02724_416117-419065' '(gnl|cdd|68427 : 235.0) no description available & (at5g28490 : 223.0) Encodes a nuclear protein that mediates light regulation of seedling development in a phytochrome-dependent manner.; LIGHT-DEPENDENT SHORT HYPOCOTYLS 1 (LSH1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT3G04510.1); Has 311 Blast hits to 311 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative LSH1, Description = Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1, PFAM = PF04852)' T '30.11' 'signalling.light' 'niben101scf02739_180698-188937' '(at3g22380 : 160.0) Encodes a nucleus-acting plant-specific clock regulator working close to the central oscillator and affecting the circadian gating of light responses. Circadian gating is the alteration of circadian phase according to the photoperiod of the entraining day/light cycle and the rhythmic antagonism of light responses in the early subjective night. TIC differentially regulates CCA1 and PRR9 from LHY, with LHY expression as a dominant genetic target of TIC action.; TIME FOR COFFEE (TIC); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of circadian rhythm; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: TIC-like (TAIR:AT3G63180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative PGSC0003DMG400031808, Description = Putative ovule protein, PFAM = )' T '30.11' 'signalling.light' 'niben101scf02751_422132-427685' '(at4g08920 : 873.0) Encodes CRY1, a flavin-type blue-light photoreceptor with ATP binding and autophosphorylation activity. Functions in perception of blue / green ratio of light. The photoreceptor may be involved in electron transport. Mutant phenotype displays a blue light-dependent inhibition of hypocotyl elongation. Photoreceptor activity requires light-induced homodimerisation of the N-terminal CNT1 domains of CRY1. Involved in blue-light induced stomatal opening. The C-terminal domain of the protein undergoes a light dependent conformational change. Also involved in response to circadian rhythm. Mutants exhibit long hypocotyl under blue light and are out of phase in their response to circadian rhythm. CRY1 is present in the nucleus and cytoplasm. Different subcellular pools of CRY1 have different functions during photomorphogenesis of Arabidopsis seedlings.; cryptochrome 1 (CRY1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal (InterPro:IPR018394), DNA photolyase, N-terminal (InterPro:IPR006050), Cryptochrome C-terminal (InterPro:IPR020978), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101), Cryptochrome, plant (InterPro:IPR014134), Cryptochrome/DNA photolyase, class 1 (InterPro:IPR002081); BEST Arabidopsis thaliana protein match is: cryptochrome 2 (TAIR:AT1G04400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p40115|phr1_sinal : 577.0) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA photolyase) (Photoreactivating enzyme) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|35355 : 465.0) no description available & (gnl|cdd|86321 : 317.0) no description available & (reliability: 1746.0) & (original description: Putative cry1, Description = Cryptochrome 1, PFAM = PF03441;PF12546;PF00875)' T '30.11' 'signalling.light' 'niben101scf02911_705964-709526' '(at4g17230 : 566.0) Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family.; SCARECROW-like 13 (SCL13); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: scarecrow-like 5 (TAIR:AT1G50600.1); Has 2512 Blast hits to 2467 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 500.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 335.0) no description available & (reliability: 1132.0) & (original description: Putative SCL13, Description = Scarecrow-like protein 13, PFAM = PF03514)' T '30.11' 'signalling.light' 'niben101scf03045_1675490-1680026' '(at1g67900 : 703.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT3G26490.1). & (q5ks50|nph3_orysa : 308.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 258.0) no description available & (reliability: 1406.0) & (original description: Putative NPY2, Description = BTB/POZ domain-containing protein NPY1, PFAM = PF03000)' T '30.11' 'signalling.light' 'niben101scf03206_53397-59177' '(at5g03250 : 717.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G30440.1); Has 979 Blast hits to 958 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 98; Fungi - 0; Plants - 876; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (q5ks50|nph3_orysa : 338.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 286.0) no description available & (reliability: 1434.0) & (original description: Putative At5g03250, Description = BTB/POZ domain-containing protein At5g03250, PFAM = PF03000;PF00651)' T '30.11' 'signalling.light' 'niben101scf03254_500248-539719' '(at1g25540 : 603.0) Encodes a nuclear protein that acts in a phyB pathway (but downstream of phyB) and induces flowering in response to suboptimal light conditions. Mutants are hypo-responsive to far-red and hyper-responsive to red light and flower late under long day conditions. Also shown to be a Mediator subunit regulating jasmonate-dependent defense.; PHYTOCHROME AND FLOWERING TIME 1 (PFT1); FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: in 8 processes; LOCATED IN: mediator complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med25, von Willebrand factor type A (InterPro:IPR021419); Has 143907 Blast hits to 47238 proteins in 2114 species: Archae - 36; Bacteria - 15136; Metazoa - 49480; Fungi - 14034; Plants - 10447; Viruses - 822; Other Eukaryotes - 53952 (source: NCBI BLink). & (gnl|cdd|38804 : 86.3) no description available & (reliability: 1206.0) & (original description: Putative MED25, Description = Mediator of RNA polymerase II transcription subunit 25, PFAM = PF11265)' T '30.11' 'signalling.light' 'niben101scf03265_48902-54979' '(at5g48800 : 775.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT3G08570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5ks50|nph3_orysa : 310.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 265.0) no description available & (reliability: 1550.0) & (original description: Putative At5g48800, Description = BTB/POZ domain-containing protein At5g48800, PFAM = PF03000;PF00651)' T '30.11' 'signalling.light' 'niben101scf03291_835-10923' '(p29130|phyb_tobac : 2253.0) Phytochrome B - Nicotiana tabacum (Common tobacco) & (at2g18790 : 1847.0) Red/far-red photoreceptor involved in the regulation of de-etiolation. Exists in two inter-convertible forms: Pr and Pfr (active). Involved in the light-promotion of seed germination and in the shade avoidance response.; phytochrome B (PHYB); CONTAINS InterPro DOMAIN/s: Phytochrome, central region (InterPro:IPR013515), Signal transduction histidine kinase, core (InterPro:IPR005467), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Phytochrome chromophore attachment domain (InterPro:IPR016132), ATPase-like, ATP-binding domain (InterPro:IPR003594), PAS fold-2 (InterPro:IPR013654), Phytochrome A/B/C/D/E (InterPro:IPR012129), Phytochrome (InterPro:IPR001294), Phytochrome chromophore binding site (InterPro:IPR013516), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: phytochrome D (TAIR:AT4G16250.1); Has 25059 Blast hits to 24774 proteins in 3701 species: Archae - 266; Bacteria - 19279; Metazoa - 9; Fungi - 493; Plants - 3930; Viruses - 5; Other Eukaryotes - 1077 (source: NCBI BLink). & (gnl|cdd|84719 : 360.0) no description available & (reliability: 3694.0) & (original description: Putative PHYB1, Description = Phytochrome B1, PFAM = PF02518;PF00360;PF00512;PF00989;PF00989;PF08446;PF01590)' T '30.11' 'signalling.light' 'niben101scf03321_659403-679455' '(at3g55850 : 695.0) Encodes a product that might regulate nucleo-cytoplasmic trafficking of an intermediate(s) involved in phyA signal transduction. Differs from isoform 2 only in the first few N-terminal amino acids.; LONG AFTER FAR-RED 3 (LAF3); FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds; INVOLVED IN: biological_process unknown; LOCATED IN: perinuclear region of cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amidohydrolase 3 (InterPro:IPR013108), Metal-dependent hydrolase, composite domain (InterPro:IPR011059); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30043 : 461.0) no description available & (reliability: 1390.0) & (original description: Putative LAF3, Description = Amidohydrolase family protein, PFAM = PF07969)' T '30.11' 'signalling.light' 'niben101scf03422_139349-143187' '(at4g29080 : 259.0) phytochrome-associated protein 2 (PAP2); phytochrome-associated protein 2 (PAP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of translation; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 8 (TAIR:AT2G22670.4); Has 2237 Blast hits to 2234 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 2235; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66035 : 230.0) no description available & (q5z749|iaa21_orysa : 213.0) Auxin-responsive protein IAA21 (Indoleacetic acid-induced protein 21) - Oryza sativa (Rice) & (reliability: 518.0) & (original description: Putative IAA14, Description = Auxin-responsive protein IAA14, PFAM = PF02309)' T '30.11' 'signalling.light' 'niben101scf03435_49843-53531' '(gnl|cdd|68427 : 209.0) no description available & (at5g28490 : 205.0) Encodes a nuclear protein that mediates light regulation of seedling development in a phytochrome-dependent manner.; LIGHT-DEPENDENT SHORT HYPOCOTYLS 1 (LSH1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT3G04510.1); Has 311 Blast hits to 311 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 410.0) & (original description: Putative ELE, Description = Protein ELONGATED EMPTY GLUME, PFAM = PF04852)' T '30.11' 'signalling.light' 'niben101scf03473_87067-90529' '(gnl|cdd|67150 : 238.0) no description available & (q8s4w7|gai1_vitvi : 187.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at5g48150 : 185.0) Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway.; phytochrome a signal transduction 1 (PAT1); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 21 (TAIR:AT2G04890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 370.0) & (original description: Putative glysoja_024156, Description = DELLA protein GAI, PFAM = PF03514)' T '30.11' 'signalling.light' 'niben101scf03482_55396-58721' '(at1g18810 : 89.0) phytochrome kinase substrate-related; BEST Arabidopsis thaliana protein match is: phytochrome kinase substrate 1 (TAIR:AT2G02950.1); Has 458 Blast hits to 394 proteins in 45 species: Archae - 0; Bacteria - 2; Metazoa - 60; Fungi - 9; Plants - 109; Viruses - 2; Other Eukaryotes - 276 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative RCOM_1514990, Description = Phytochrome kinase substrate, putative, PFAM = )' T '30.11' 'signalling.light' 'niben101scf03541_2332-16303' '(at4g17230 : 609.0) Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family.; SCARECROW-like 13 (SCL13); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: scarecrow-like 5 (TAIR:AT1G50600.1); Has 2512 Blast hits to 2467 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 522.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 339.0) no description available & (reliability: 1218.0) & (original description: Putative SCL13, Description = Scarecrow-like protein 13, PFAM = PF03514)' T '30.11' 'signalling.light' 'niben101scf03549_20632-26362' '(at5g67385 : 771.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT3G49970.1); Has 920 Blast hits to 899 proteins in 47 species: Archae - 0; Bacteria - 4; Metazoa - 39; Fungi - 6; Plants - 863; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q5ks50|nph3_orysa : 343.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 285.0) no description available & (reliability: 1542.0) & (original description: Putative At5g67385, Description = BTB/POZ domain-containing protein At5g67385, PFAM = PF00651;PF03000)' T '30.11' 'signalling.light' 'niben101scf03701_171819-177101' '(at4g29080 : 255.0) phytochrome-associated protein 2 (PAP2); phytochrome-associated protein 2 (PAP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of translation; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 8 (TAIR:AT2G22670.4); Has 2237 Blast hits to 2234 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 2235; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66035 : 219.0) no description available & (p0c132|iaa30_orysa : 203.0) Auxin-responsive protein IAA30 (Indoleacetic acid-induced protein 30) - Oryza sativa (Rice) & (reliability: 510.0) & (original description: Putative IAA4, Description = Auxin-responsive protein, PFAM = PF02309)' T '30.11' 'signalling.light' 'niben101scf03747_300937-306548' '(at2g14820 : 650.0) A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis.; NAKED PINS IN YUC MUTANTS 2 (NPY2); FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypophysis, root meristem; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT5G67440.1); Has 895 Blast hits to 867 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 2; Plants - 877; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (q5ks50|nph3_orysa : 358.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 293.0) no description available & (reliability: 1300.0) & (original description: Putative NPY2, Description = BTB/POZ domain-containing protein NPY2, PFAM = PF00651;PF03000)' T '30.11' 'signalling.light' 'niben101scf03905_133143-143315' '(p29130|phyb_tobac : 2258.0) Phytochrome B - Nicotiana tabacum (Common tobacco) & (at2g18790 : 1840.0) Red/far-red photoreceptor involved in the regulation of de-etiolation. Exists in two inter-convertible forms: Pr and Pfr (active). Involved in the light-promotion of seed germination and in the shade avoidance response.; phytochrome B (PHYB); CONTAINS InterPro DOMAIN/s: Phytochrome, central region (InterPro:IPR013515), Signal transduction histidine kinase, core (InterPro:IPR005467), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Phytochrome chromophore attachment domain (InterPro:IPR016132), ATPase-like, ATP-binding domain (InterPro:IPR003594), PAS fold-2 (InterPro:IPR013654), Phytochrome A/B/C/D/E (InterPro:IPR012129), Phytochrome (InterPro:IPR001294), Phytochrome chromophore binding site (InterPro:IPR013516), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: phytochrome D (TAIR:AT4G16250.1); Has 25059 Blast hits to 24774 proteins in 3701 species: Archae - 266; Bacteria - 19279; Metazoa - 9; Fungi - 493; Plants - 3930; Viruses - 5; Other Eukaryotes - 1077 (source: NCBI BLink). & (gnl|cdd|84719 : 355.0) no description available & (reliability: 3680.0) & (original description: Putative PHYB1, Description = Phytochrome B1, PFAM = PF08446;PF00512;PF00989;PF00989;PF00360;PF02518;PF01590)' T '30.11' 'signalling.light' 'niben101scf03911_546348-555782' '(gnl|cdd|35740 : 613.0) no description available & (at1g67310 : 552.0) Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains; FUNCTIONS IN: calmodulin binding, transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Ankyrin repeat-containing domain (InterPro:IPR020683), CG-1 (InterPro:IPR005559), Cell surface receptor IPT/TIG (InterPro:IPR002909), Ankyrin repeat (InterPro:IPR002110), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: signal responsive 1 (TAIR:AT2G22300.2); Has 4214 Blast hits to 2978 proteins in 268 species: Archae - 9; Bacteria - 179; Metazoa - 1855; Fungi - 220; Plants - 413; Viruses - 4; Other Eukaryotes - 1534 (source: NCBI BLink). & (gnl|cdd|67472 : 196.0) no description available & (reliability: 1104.0) & (original description: Putative CMTA4, Description = Calmodulin-binding transcription activator 4, PFAM = PF01833;PF03859;PF12796;PF00612;PF00612)' T '30.11' 'signalling.light' 'niben101scf03944_61583-70982' '(p29130|phyb_tobac : 1964.0) Phytochrome B - Nicotiana tabacum (Common tobacco) & (at2g18790 : 1736.0) Red/far-red photoreceptor involved in the regulation of de-etiolation. Exists in two inter-convertible forms: Pr and Pfr (active). Involved in the light-promotion of seed germination and in the shade avoidance response.; phytochrome B (PHYB); CONTAINS InterPro DOMAIN/s: Phytochrome, central region (InterPro:IPR013515), Signal transduction histidine kinase, core (InterPro:IPR005467), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Phytochrome chromophore attachment domain (InterPro:IPR016132), ATPase-like, ATP-binding domain (InterPro:IPR003594), PAS fold-2 (InterPro:IPR013654), Phytochrome A/B/C/D/E (InterPro:IPR012129), Phytochrome (InterPro:IPR001294), Phytochrome chromophore binding site (InterPro:IPR013516), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: phytochrome D (TAIR:AT4G16250.1); Has 25059 Blast hits to 24774 proteins in 3701 species: Archae - 266; Bacteria - 19279; Metazoa - 9; Fungi - 493; Plants - 3930; Viruses - 5; Other Eukaryotes - 1077 (source: NCBI BLink). & (gnl|cdd|84719 : 341.0) no description available & (reliability: 3472.0) & (original description: Putative PHYB2, Description = Phytochrome, PFAM = PF01590;PF00360;PF02518;PF00989;PF00989;PF08446;PF00512)' T '30.11' 'signalling.light' 'niben101scf03969_203605-207790' '(at1g55080 : 88.6) MED9; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G29580.1); Has 67203 Blast hits to 25757 proteins in 1293 species: Archae - 12; Bacteria - 4374; Metazoa - 24340; Fungi - 7940; Plants - 5927; Viruses - 273; Other Eukaryotes - 24337 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative MED9, Description = Mediator of RNA polymerase II transcription subunit 9, PFAM = )' T '30.11' 'signalling.light' 'niben101scf03973_190407-196808' '(at3g44820 : 761.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G30440.1); Has 907 Blast hits to 880 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi - 0; Plants - 873; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (q5ks50|nph3_orysa : 303.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 259.0) no description available & (reliability: 1522.0) & (original description: Putative At3g44820, Description = BTB/POZ domain-containing protein At3g44820, PFAM = PF00651;PF03000)' T '30.11' 'signalling.light' 'niben101scf03985_207081-218655' '(at4g11110 : 816.0) Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA2 primarily regulates seedling development in darkness and has little function in light-grown seedlings or adult plants.; SPA1-related 2 (SPA2); FUNCTIONS IN: protein binding, signal transducer activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), Protein kinase, catalytic domain (InterPro:IPR000719), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA (suppressor of phyA-105) protein family (TAIR:AT2G46340.1); Has 34047 Blast hits to 20982 proteins in 883 species: Archae - 38; Bacteria - 5461; Metazoa - 12841; Fungi - 7307; Plants - 4015; Viruses - 10; Other Eukaryotes - 4375 (source: NCBI BLink). & (p93471|cop1_pea : 341.0) E3 ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive photomorphogenesis protein 1) - Pisum sativum (Garden pea) & (gnl|cdd|29257 : 124.0) no description available & (gnl|cdd|36251 : 115.0) no description available & (reliability: 1632.0) & (original description: Putative SPA2, Description = Protein SPA1-RELATED 2, PFAM = PF00400)' T '30.11' 'signalling.light' 'niben101scf04019_494865-501326' '(at1g03010 : 808.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus, pollen tube growth; EXPRESSED IN: leaf apex, inflorescence meristem, cauline leaf, root, flower; EXPRESSED DURING: M germinated pollen stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT2G47860.1); Has 882 Blast hits to 854 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 870; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|66659 : 277.0) no description available & (q5ks50|nph3_orysa : 182.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (reliability: 1616.0) & (original description: Putative At1g03010, Description = BTB/POZ domain-containing protein At1g03010, PFAM = PF00651;PF03000)' T '30.11' 'signalling.light' 'niben101scf04044_1768355-1770825' '(gnl|cdd|70474 : 86.2) no description available & (at2g40080 : 82.8) Encodes a novel nuclear 111 amino-acid phytochrome-regulated component of a negative feedback loop involving the circadian clock central oscillator components CCA1 and LHY. ELF4 is necessary for light-induced expression of both CCA1 and LHY, and conversely, CCA1 and LHY act negatively on light-induced ELF4 expression. ELF4 promotes clock accuracy and is required for sustained rhythms in the absence of daily light/dark cycles. It is involved in the phyB-mediated constant red light induced seedling de-etiolation process and may function to coregulate the expression of a subset of phyB-regulated genes.; EARLY FLOWERING 4 (ELF4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1313 (InterPro:IPR009741); BEST Arabidopsis thaliana protein match is: ELF4-like 1 (TAIR:AT2G29950.1); Has 150 Blast hits to 149 proteins in 35 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 146; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative ELF4, Description = Protein EARLY FLOWERING 4, PFAM = PF07011)' T '30.11' 'signalling.light' 'niben101scf04290_351157-354548' '(at1g18810 : 103.0) phytochrome kinase substrate-related; BEST Arabidopsis thaliana protein match is: phytochrome kinase substrate 1 (TAIR:AT2G02950.1); Has 458 Blast hits to 394 proteins in 45 species: Archae - 0; Bacteria - 2; Metazoa - 60; Fungi - 9; Plants - 109; Viruses - 2; Other Eukaryotes - 276 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative PGSC0003DMG400033102, Description = Phytochrome kinase substrate 1, putative, PFAM = )' T '30.11' 'signalling.light' 'niben101scf04820_253555-258097' '(at1g52770 : 487.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT3G15570.1); Has 830 Blast hits to 821 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 829; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66659 : 259.0) no description available & (q5ks50|nph3_orysa : 244.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (reliability: 974.0) & (original description: Putative BnaA05g23950D, Description = BnaA05g23950D protein, PFAM = PF03000)' T '30.11' 'signalling.light' 'niben101scf04954_289549-296784' '(at5g03250 : 713.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G30440.1); Has 979 Blast hits to 958 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 98; Fungi - 0; Plants - 876; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (q5ks50|nph3_orysa : 352.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 269.0) no description available & (reliability: 1426.0) & (original description: Putative At5g03250, Description = BTB/POZ domain-containing protein At5g03250, PFAM = PF00651;PF03000)' T '30.11' 'signalling.light' 'niben101scf05178_22519-30277' '(at1g52520 : 621.0) FAR1-related sequence 6 (FRS6); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 8 (TAIR:AT1G80010.1); Has 1626 Blast hits to 1478 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 91; Plants - 1518; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|86237 : 95.0) no description available & (reliability: 1242.0) & (original description: Putative FRS6, Description = Protein FAR1-RELATED SEQUENCE 6, PFAM = PF03101;PF10551;PF04434)' T '30.11' 'signalling.light' 'niben101scf05178_22778-27369' '(at1g52520 : 521.0) FAR1-related sequence 6 (FRS6); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, PMZ-type (InterPro:IPR006564), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 8 (TAIR:AT1G80010.1); Has 1626 Blast hits to 1478 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 91; Plants - 1518; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|86237 : 94.6) no description available & (reliability: 1042.0) & (original description: Putative FRS6, Description = Protein FAR1-RELATED SEQUENCE 6, PFAM = PF10551;PF03101)' T '30.11' 'signalling.light' 'niben101scf05726_193504-197810' '(at1g25540 : 145.0) Encodes a nuclear protein that acts in a phyB pathway (but downstream of phyB) and induces flowering in response to suboptimal light conditions. Mutants are hypo-responsive to far-red and hyper-responsive to red light and flower late under long day conditions. Also shown to be a Mediator subunit regulating jasmonate-dependent defense.; PHYTOCHROME AND FLOWERING TIME 1 (PFT1); FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: in 8 processes; LOCATED IN: mediator complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med25, von Willebrand factor type A (InterPro:IPR021419); Has 143907 Blast hits to 47238 proteins in 2114 species: Archae - 36; Bacteria - 15136; Metazoa - 49480; Fungi - 14034; Plants - 10447; Viruses - 822; Other Eukaryotes - 53952 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative PFT1, Description = Mediator of RNA polymerase II transcription subunit 25, PFAM = )' T '30.11' 'signalling.light' 'niben101scf05749_40635-47364' '(at2g14820 : 691.0) A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis.; NAKED PINS IN YUC MUTANTS 2 (NPY2); FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypophysis, root meristem; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT5G67440.1); Has 895 Blast hits to 867 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 2; Plants - 877; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (q5ks50|nph3_orysa : 326.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 301.0) no description available & (reliability: 1382.0) & (original description: Putative NPY2, Description = BTB/POZ domain-containing protein NPY2, PFAM = PF00651;PF03000)' T '30.11' 'signalling.light' 'niben101scf05962_485506-488793' '(p11432|eli_pea : 174.0) Early light-induced protein, chloroplast precursor (ELIP) - Pisum sativum (Garden pea) & (at3g22840 : 173.0) Encodes an early light-inducible protein.; EARLY LIGHT-INDUCABLE PROTEIN (ELIP1); BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT4G14690.1); Has 319 Blast hits to 319 proteins in 50 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 259; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative elip, Description = Early light-induced protein, PFAM = PF00504)' T '30.11' 'signalling.light' 'niben101scf06193_73680-78379' '(at3g22104 : 383.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT3G19850.1); Has 844 Blast hits to 828 proteins in 39 species: Archae - 0; Bacteria - 4; Metazoa - 27; Fungi - 3; Plants - 786; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|66659 : 161.0) no description available & (q5ks50|nph3_orysa : 94.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (reliability: 766.0) & (original description: Putative At3g22104, Description = BTB/POZ domain-containing protein At3g22104, PFAM = PF03000)' T '30.11' 'signalling.light' 'niben101scf06203_281570-289106' '(at3g18890 : 382.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G34460.1); Has 26348 Blast hits to 17063 proteins in 1661 species: Archae - 97; Bacteria - 5228; Metazoa - 9723; Fungi - 4680; Plants - 1695; Viruses - 652; Other Eukaryotes - 4273 (source: NCBI BLink). & (gnl|cdd|36417 : 191.0) no description available & (reliability: 764.0) & (original description: Putative TIC62, Description = Protein TIC 62, chloroplastic, PFAM = PF13460)' T '30.11' 'signalling.light' 'niben101scf06332_198450-202195' '(q69vg1|cigr1_orysa : 583.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (at5g48150 : 503.0) Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway.; phytochrome a signal transduction 1 (PAT1); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 21 (TAIR:AT2G04890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67150 : 304.0) no description available & (reliability: 1006.0) & (original description: Putative CIGR1, Description = Chitin-inducible gibberellin-responsive protein 1, PFAM = PF03514)' T '30.11' 'signalling.light' 'niben101scf06392_223795-228128' '(at3g06250 : 886.0) FAR1-related sequence 7 (FRS7); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 12 (TAIR:AT5G18960.1); Has 2099 Blast hits to 1278 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 21; Plants - 2069; Viruses - 2; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86237 : 101.0) no description available & (reliability: 1772.0) & (original description: Putative FRS7, Description = Protein FAR1-RELATED SEQUENCE 7, PFAM = PF03101;PF03101;PF10551;PF04434)' T '30.11' 'signalling.light' 'niben101scf06507_55292-59936' '(at2g30520 : 837.0) light inducible root phototropism 2 encoding a signal transducer of the phototropic response in Arabidopsis; ROOT PHOTOTROPISM 2 (RPT2); FUNCTIONS IN: signal transducer activity; INVOLVED IN: phototropism; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT5G67385.1); Has 865 Blast hits to 833 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 860; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q5ks50|nph3_orysa : 280.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 260.0) no description available & (reliability: 1674.0) & (original description: Putative RPT2, Description = Root phototropism protein 2, PFAM = PF03000;PF00651)' T '30.11' 'signalling.light' 'niben101scf06528_380579-389198' '(at4g31820 : 613.0) A member of the NPY family genes (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Encodes a protein with similarity to NHP3. Contains BTB/POZ domain. Promoter region has canonical auxin response element binding site and Wus binding site. Co-localizes to the late endosome with PID. Regulates cotyledon development through control of PIN1 polarity in concert with PID. Also involved in sepal and gynoecia development.; ENHANCER OF PINOID (ENP); FUNCTIONS IN: signal transducer activity; INVOLVED IN: in 8 processes; LOCATED IN: late endosome, plasma membrane; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT5G67440.1); Has 898 Blast hits to 870 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 2; Plants - 875; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (q5ks50|nph3_orysa : 336.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 254.0) no description available & (reliability: 1226.0) & (original description: Putative NPY1, Description = BTB/POZ domain-containing protein NPY1, PFAM = PF00651;PF03000)' T '30.11' 'signalling.light' 'niben101scf06779_53266-62453' '(at1g04400 : 784.0) Blue light receptor mediating blue-light regulated cotyledon expansion and flowering time. Positive regulator of the flowering-time gene CONSTANS. This gene possesses a light-induced CNT2 N-terminal homodimerisation domain.Involved in blue-light induced stomatal opening. Involved in triggering chromatin decondensation. An 80-residue motif (NC80) is sufficient to confer CRY2's physiological function. It is proposed that the PHR domain and the C-terminal tail of the unphosphorylated CRY2 form a "closed" conformation to suppress the NC80 motif in the absence of light. In response to blue light, the C-terminal tail of CRY2 is phosphorylated and electrostatically repelled from the surface of the PHR domain to form an "open" conformation, resulting in derepression of the NC80 motif and signal transduction to trigger photomorphogenic responses. Cry2 phosphorylation and degradation both occur in the nucleus.; cryptochrome 2 (CRY2); FUNCTIONS IN: protein homodimerization activity, blue light photoreceptor activity; INVOLVED IN: in 9 processes; LOCATED IN: nucleus, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal (InterPro:IPR018394), DNA photolyase, N-terminal (InterPro:IPR006050), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101), Cryptochrome, plant (InterPro:IPR014134), Cryptochrome/DNA photolyase, class 1 (InterPro:IPR002081); BEST Arabidopsis thaliana protein match is: cryptochrome 1 (TAIR:AT4G08920.1); Has 10129 Blast hits to 10113 proteins in 1516 species: Archae - 99; Bacteria - 3201; Metazoa - 386; Fungi - 148; Plants - 723; Viruses - 2; Other Eukaryotes - 5570 (source: NCBI BLink). & (p40115|phr1_sinal : 738.0) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA photolyase) (Photoreactivating enzyme) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|35355 : 440.0) no description available & (gnl|cdd|30764 : 348.0) no description available & (reliability: 1568.0) & (original description: Putative cry2, Description = Cryptochrome 2, PFAM = PF00875;PF03441)' T '30.11' 'signalling.light' 'niben101scf07018_18180-20584' '(gnl|cdd|70474 : 85.4) no description available & (at2g40080 : 81.6) Encodes a novel nuclear 111 amino-acid phytochrome-regulated component of a negative feedback loop involving the circadian clock central oscillator components CCA1 and LHY. ELF4 is necessary for light-induced expression of both CCA1 and LHY, and conversely, CCA1 and LHY act negatively on light-induced ELF4 expression. ELF4 promotes clock accuracy and is required for sustained rhythms in the absence of daily light/dark cycles. It is involved in the phyB-mediated constant red light induced seedling de-etiolation process and may function to coregulate the expression of a subset of phyB-regulated genes.; EARLY FLOWERING 4 (ELF4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1313 (InterPro:IPR009741); BEST Arabidopsis thaliana protein match is: ELF4-like 1 (TAIR:AT2G29950.1); Has 150 Blast hits to 149 proteins in 35 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 146; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative ELF4, Description = Early flowering protein, PFAM = PF07011)' T '30.11' 'signalling.light' 'niben101scf07058_60077-63498' '(at1g14280 : 119.0) Encodes phytochrome kinase substrate 2. PKS proteins are critical for hypocotyl phototropism. Forms a complex with Phot1, Phot2 and NPH3.; phytochrome kinase substrate 2 (PKS2); BEST Arabidopsis thaliana protein match is: phytochrome kinase substrate 1 (TAIR:AT2G02950.1); Has 337 Blast hits to 325 proteins in 29 species: Archae - 0; Bacteria - 2; Metazoa - 13; Fungi - 6; Plants - 286; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative)' T '30.11' 'signalling.light' 'niben101scf07230_80661-85912' '(at4g29080 : 244.0) phytochrome-associated protein 2 (PAP2); phytochrome-associated protein 2 (PAP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of translation; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 8 (TAIR:AT2G22670.4); Has 2237 Blast hits to 2234 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 2235; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66035 : 196.0) no description available & (q5z749|iaa21_orysa : 186.0) Auxin-responsive protein IAA21 (Indoleacetic acid-induced protein 21) - Oryza sativa (Rice) & (reliability: 488.0) & (original description: Putative IAA8, Description = Auxin-responsive protein IAA8, PFAM = PF02309)' T '30.11' 'signalling.light' 'niben101scf07511_377088-386255' '(at5g65540 : 459.0) unknown protein; Has 6825 Blast hits to 3811 proteins in 289 species: Archae - 0; Bacteria - 184; Metazoa - 2139; Fungi - 760; Plants - 816; Viruses - 52; Other Eukaryotes - 2874 (source: NCBI BLink). & (reliability: 918.0) & (original description: Putative TCM_000971, Description = Transcription initiation factor TFIID subunit 8, putative isoform 1, PFAM = )' T '30.11' 'signalling.light' 'niben101scf08050_13743-18185' '(at1g67900 : 689.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT3G26490.1). & (q5ks50|nph3_orysa : 293.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 260.0) no description available & (reliability: 1378.0) & (original description: Putative At1g67900, Description = BTB/POZ domain-containing protein At1g67900, PFAM = PF03000)' T '30.11' 'signalling.light' 'niben101scf08811_2054-5298' '(at5g48150 : 612.0) Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway.; phytochrome a signal transduction 1 (PAT1); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 21 (TAIR:AT2G04890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 588.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 351.0) no description available & (reliability: 1224.0) & (original description: Putative CIGR2, Description = Chitin-inducible gibberellin-responsive protein 2, PFAM = PF03514)' T '30.11' 'signalling.light' 'niben101scf08984_334580-340415' '(at3g19850 : 468.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G50280.1); Has 817 Blast hits to 802 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 810; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|66659 : 207.0) no description available & (q5ks50|nph3_orysa : 114.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (reliability: 936.0) & (original description: Putative At3g19850, Description = BTB/POZ domain-containing protein At3g19850, PFAM = PF03000)' T '30.11' 'signalling.light' 'niben101scf09335_111083-136316' '(at1g25540 : 413.0) Encodes a nuclear protein that acts in a phyB pathway (but downstream of phyB) and induces flowering in response to suboptimal light conditions. Mutants are hypo-responsive to far-red and hyper-responsive to red light and flower late under long day conditions. Also shown to be a Mediator subunit regulating jasmonate-dependent defense.; PHYTOCHROME AND FLOWERING TIME 1 (PFT1); FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: in 8 processes; LOCATED IN: mediator complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med25, von Willebrand factor type A (InterPro:IPR021419); Has 143907 Blast hits to 47238 proteins in 2114 species: Archae - 36; Bacteria - 15136; Metazoa - 49480; Fungi - 14034; Plants - 10447; Viruses - 822; Other Eukaryotes - 53952 (source: NCBI BLink). & (reliability: 826.0) & (original description: Putative PFT1, Description = Mediator of RNA polymerase II transcription subunit 25, PFAM = PF11265)' T '30.11' 'signalling.light' 'niben101scf09353_279619-287119' '(at1g09530 : 128.0) Transcription factor interacting with photoreceptors phyA and phyB. Forms a ternary complex in vitro with G-box element of the promoters of LHY, CCA1. Acts as a negative regulator of phyB signalling. It degrades rapidly after irradiation of dark grown seedlings in a process controlled by phytochromes. Does not play a significant role in controlling light input and function of the circadian clockwork. Binds to G- and E-boxes, but not to other ACEs. Binds to anthocyanin biosynthetic genes in a light- and HY5-independent fashion. PIF3 function as a transcriptional activator can be functionally and mechanistically separated from its role in repression of PhyB mediated processes.; phytochrome interacting factor 3 (PIF3); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome interacting factor 3-like 1 (TAIR:AT2G46970.1); Has 4326 Blast hits to 4310 proteins in 315 species: Archae - 0; Bacteria - 2; Metazoa - 732; Fungi - 183; Plants - 3377; Viruses - 7; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative bHLH7, Description = Transcription factor PIF1, PFAM = PF00010)' T '30.11' 'signalling.light' 'niben101scf10048_1-2617' '(at5g48150 : 655.0) Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway.; phytochrome a signal transduction 1 (PAT1); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 21 (TAIR:AT2G04890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 584.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 360.0) no description available & (reliability: 1310.0) & (original description: Putative PAT1, Description = Scarecrow-like transcription factor PAT1, PFAM = PF03514)' T '30.11' 'signalling.light' 'niben101scf10056_90722-103359' '(at4g38170 : 598.0) FAR1-related sequence 9 (FRS9); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PMZ-type (InterPro:IPR006564), MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 5 (TAIR:AT4G38180.1); Has 1073 Blast hits to 1051 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 2; Plants - 1067; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1146.0) & (original description: Putative FRS9, Description = Protein FAR1-RELATED SEQUENCE 9, PFAM = PF10551;PF04434)' T '30.11' 'signalling.light' 'niben101scf10262_59454-62595' '(at5g67385 : 307.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT3G49970.1); Has 920 Blast hits to 899 proteins in 47 species: Archae - 0; Bacteria - 4; Metazoa - 39; Fungi - 6; Plants - 863; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q5ks50|nph3_orysa : 129.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (reliability: 614.0) & (original description: Putative 5, Description = Phototropic-responsive NPH3 family protein, PFAM = PF03000;PF00651)' T '30.11' 'signalling.light' 'niben101scf10268_77238-90527' '(at4g18810 : 775.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (InterPro:IPR013857), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: high chlorophyll fluorescence phenotype 173 (TAIR:AT1G16720.1). & (gnl|cdd|36417 : 195.0) no description available & (gnl|cdd|87565 : 175.0) no description available & (reliability: 1550.0) & (original description: Putative apha_01567, Description = NADH:ubiquinone oxidoreductase complex I intermed iate-associated protein 30, PFAM = PF08547;PF13460;PF13460)' T '30.11' 'signalling.light' 'niben101scf12852_422660-429108' '(at1g09530 : 195.0) Transcription factor interacting with photoreceptors phyA and phyB. Forms a ternary complex in vitro with G-box element of the promoters of LHY, CCA1. Acts as a negative regulator of phyB signalling. It degrades rapidly after irradiation of dark grown seedlings in a process controlled by phytochromes. Does not play a significant role in controlling light input and function of the circadian clockwork. Binds to G- and E-boxes, but not to other ACEs. Binds to anthocyanin biosynthetic genes in a light- and HY5-independent fashion. PIF3 function as a transcriptional activator can be functionally and mechanistically separated from its role in repression of PhyB mediated processes.; phytochrome interacting factor 3 (PIF3); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome interacting factor 3-like 1 (TAIR:AT2G46970.1); Has 4326 Blast hits to 4310 proteins in 315 species: Archae - 0; Bacteria - 2; Metazoa - 732; Fungi - 183; Plants - 3377; Viruses - 7; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative bHLH7, Description = Transcription factor PIF1, PFAM = PF00010)' T '30.11' 'signalling.light' 'niben101scf13748_145455-150713' '(at1g03010 : 809.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus, pollen tube growth; EXPRESSED IN: leaf apex, inflorescence meristem, cauline leaf, root, flower; EXPRESSED DURING: M germinated pollen stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT2G47860.1); Has 882 Blast hits to 854 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 870; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|66659 : 279.0) no description available & (q5ks50|nph3_orysa : 179.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (reliability: 1618.0) & (original description: Putative At1g03010, Description = BTB/POZ domain-containing protein At1g03010, PFAM = PF03000;PF00651)' T '30.11' 'signalling.light' 'niben101scf15437_187770-191518' '(q69vg1|cigr1_orysa : 615.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (at5g48150 : 511.0) Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway.; phytochrome a signal transduction 1 (PAT1); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 21 (TAIR:AT2G04890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67150 : 319.0) no description available & (reliability: 1022.0) & (original description: Putative CIGR1, Description = Chitin-inducible gibberellin-responsive protein 1, PFAM = PF03514)' T '30.11' 'signalling.light' 'niben101scf15543_46313-53042' '(at2g14820 : 654.0) A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis.; NAKED PINS IN YUC MUTANTS 2 (NPY2); FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypophysis, root meristem; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT5G67440.1); Has 895 Blast hits to 867 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 2; Plants - 877; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (q5ks50|nph3_orysa : 359.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 306.0) no description available & (reliability: 1308.0) & (original description: Putative NPY2, Description = BTB/POZ domain-containing protein NPY2, PFAM = PF00651;PF03000)' T '30.11' 'signalling.light' 'niben101scf16329_89155-98185' '(q9zwi9|phyc_orysa : 1488.0) Phytochrome C - Oryza sativa (Rice) & (at5g35840 : 1402.0) Encodes the apoprotein of phytochrome;one of a family of photoreceptors that modulate plant growth and development.; phytochrome C (PHYC); FUNCTIONS IN: protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Phytochrome, central region (InterPro:IPR013515), Signal transduction histidine kinase, core (InterPro:IPR005467), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Phytochrome chromophore attachment domain (InterPro:IPR016132), ATPase-like, ATP-binding domain (InterPro:IPR003594), PAS fold-2 (InterPro:IPR013654), Phytochrome A/B/C/D/E (InterPro:IPR012129), Phytochrome (InterPro:IPR001294), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Phytochrome chromophore binding site (InterPro:IPR013516), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: phytochrome A (TAIR:AT1G09570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84719 : 360.0) no description available & (reliability: 2804.0) & (original description: Putative phyC, Description = Phytochrome C, PFAM = PF02518;PF00989;PF00989;PF00360;PF01590;PF08446)' T '30.11' 'signalling.light' 'niben101scf16888_26964-43296' '(at2g21150 : 439.0) XAP5 family protein involved in light regulation of the circadian clock and photomorphogenesis. Nuclear localized.; XAP5 CIRCADIAN TIMEKEEPER (XCT); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of circadian rhythm, response to blue light, response to red light, regulation of photomorphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: XAP5 protein (InterPro:IPR007005); Has 1721 Blast hits to 1474 proteins in 237 species: Archae - 2; Bacteria - 40; Metazoa - 614; Fungi - 190; Plants - 85; Viruses - 22; Other Eukaryotes - 768 (source: NCBI BLink). & (gnl|cdd|38105 : 371.0) no description available & (gnl|cdd|68493 : 296.0) no description available & (reliability: 878.0) & (original description: Putative XCT, Description = Protein XAP5 CIRCADIAN TIMEKEEPER, PFAM = PF04921)' T '30.11' 'signalling.light' 'niben101scf17540_4343-13425' '(at2g02710 : 390.0) Encodes a putative blue light receptor protein.; PAS/LOV PROTEIN C (PLPC); FUNCTIONS IN: two-component sensor activity, signal transducer activity; INVOLVED IN: signal transduction, regulation of transcription, DNA-dependent, two-component signal transduction system (phosphorelay); LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700); BEST Arabidopsis thaliana protein match is: phototropin 2 (TAIR:AT5G58140.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35722 : 83.6) no description available & (reliability: 780.0) & (original description: Putative TLP1, Description = Protein TWIN LOV 1, PFAM = PF13426;PF13426)' T '30.11' 'signalling.light' 'niben101scf17594_96125-105272' '(at1g10240 : 1125.0) FAR1-related sequence 11 (FRS11); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 10 (TAIR:AT5G28530.1); Has 1389 Blast hits to 1253 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 83; Plants - 1296; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|86237 : 90.4) no description available & (reliability: 2250.0) & (original description: Putative FRS11, Description = Protein FAR1-RELATED SEQUENCE 11, PFAM = PF04434;PF03101;PF10551)' T '30.11' 'signalling.light' 'niben101scf17983_53152-55990' '(at2g37680 : 243.0) CONTAINS InterPro DOMAIN/s: Vacuolar import/degradation protein Vid24 (InterPro:IPR018618); Has 318 Blast hits to 317 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 184; Plants - 51; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|39835 : 91.2) no description available & (gnl|cdd|34677 : 87.4) no description available & (reliability: 486.0) & (original description: Putative , Description = L-type lectin-domain containing receptor kinase IV.1, PFAM = PF09783)' T '30.11' 'signalling.light' 'niben101scf20325_25059-30191' '(at1g03010 : 753.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus, pollen tube growth; EXPRESSED IN: leaf apex, inflorescence meristem, cauline leaf, root, flower; EXPRESSED DURING: M germinated pollen stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT2G47860.1); Has 882 Blast hits to 854 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 870; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|66659 : 274.0) no description available & (q5ks50|nph3_orysa : 196.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (reliability: 1506.0) & (original description: Putative At3g08660, Description = Putative BTB/POZ domain-containing protein At3g08660, PFAM = PF03000;PF00651)' T '30.11' 'signalling.light' 'niben101scf22538_21614-23591' '(at5g59560 : 270.0) Encodes a novel protein conserved in higher eukaryotes. Normal function of the protein is required for normal oscillator function during circadian rhythm. Mutant analyses also suggest a role in phytochrome B (phyB)-mediated light signaling.; SENSITIVITY TO RED LIGHT REDUCED 1 (SRR1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of circadian rhythm, red, far-red light phototransduction; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sensitivity To Red Light Reduced-like, SRR1 (InterPro:IPR012942); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38341 : 175.0) no description available & (reliability: 540.0) & (original description: Putative SRR1, Description = Protein SENSITIVITY TO RED LIGHT REDUCED 1, PFAM = PF07985)' T '30.11' 'signalling.light' 'niben101scf26477_8544-14851' '(at5g10250 : 544.0) Encodes a protein with an N-terminal BTB/POZ domain and a C-terminal NPH3 family domain. dot3 mutants have defects in shoot and primary root growth and produce an aberrant parallel venation pattern in juvenile leaves.; DEFECTIVELY ORGANIZED TRIBUTARIES 3 (DOT3); FUNCTIONS IN: signal transducer activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf primordium; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT5G64330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5ks50|nph3_orysa : 367.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (gnl|cdd|66659 : 243.0) no description available & (reliability: 1088.0) & (original description: Putative DOT3, Description = BTB/POZ domain-containing protein DOT3, PFAM = PF03000;PF00651)' T '30.11' 'signalling.light' 'niben101scf28593_87629-92462' '(at4g29080 : 268.0) phytochrome-associated protein 2 (PAP2); phytochrome-associated protein 2 (PAP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of translation; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 8 (TAIR:AT2G22670.4); Has 2237 Blast hits to 2234 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 2235; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66035 : 237.0) no description available & (q5z749|iaa21_orysa : 225.0) Auxin-responsive protein IAA21 (Indoleacetic acid-induced protein 21) - Oryza sativa (Rice) & (reliability: 536.0) & (original description: Putative IAA27, Description = Auxin-responsive protein IAA27, PFAM = PF02309)' T '30.11' 'signalling.light' 'niben101scf35862_9613-18336' '(at3g19850 : 465.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G50280.1); Has 817 Blast hits to 802 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 810; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|66659 : 210.0) no description available & (q5ks50|nph3_orysa : 120.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (reliability: 930.0) & (original description: Putative MTR_1g035720, Description = Phototropic-responsive NPH3 family protein, PFAM = PF03000)' T '30.11.1' 'signalling.light.COP9 signalosome' 'nbv0.3scaffold13250_1949-12019' '(at1g02090 : 342.0) encodes a phosphoprotein that is a subunit of the COP9 signalosome. Mutants exhibit constitutive photomorphogenic phenotype.; FUSCA 5 (FUS5); CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38460 : 289.0) no description available & (reliability: 684.0) & (original description: Putative CSN7, Description = COP9 signalosome complex subunit 7, PFAM = PF01399)' T '30.11.1' 'signalling.light.COP9 signalosome' 'nbv0.3scaffold19633_14576-21633' '(at5g56280 : 471.0) one of two genes encoding subunit 6 of COP9 signalosome complex. Protein contains a MPR1p and PAD1p N-terminal (MPN) domain at the N-terminal region and belongs to the Mov34 superfamily. Mutant and antisense expression result in a number of developmental defects and in ubiquitin/proteasome-mediated protein degradation.; COP9 signalosome subunit 6A (CSN6A); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: COP9 signalosome subunit 6B (TAIR:AT4G26430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38260 : 394.0) no description available & (reliability: 942.0) & (original description: Putative CSN6A, Description = COP9 signalosome complex subunit 6a, PFAM = PF13012;PF01398)' T '30.11.1' 'signalling.light.COP9 signalosome' 'niben044scf00001187ctg008_212-11418' '(at5g43310 : 670.0) COP1-interacting protein-related; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: COP1-interacting protein 7 (TAIR:AT4G27430.2). & (reliability: 1340.0) & (original description: Putative CIP7, Description = COP1-interacting-like protein, PFAM = )' T '30.11.1' 'signalling.light.COP9 signalosome' 'niben044scf00003094ctg015_601-10068' '(at5g42970 : 559.0) encodes subunit 4 of COP9 signalosome complex. sequence is similar to a subunit of the 19S regulatory particle of the 26S proteasome. recessive mutation causes derepression of photomorphogenesis.; CONSTITUTIVE PHOTOMORPHOGENIC 8 (COP8); FUNCTIONS IN: protein binding; INVOLVED IN: cullin deneddylation, negative regulation of photomorphogenesis, G2 phase of mitotic cell cycle, photomorphogenesis; LOCATED IN: signalosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: regulatory particle non-ATPase subunit 5B (TAIR:AT5G64760.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36710 : 442.0) no description available & (reliability: 1118.0) & (original description: Putative CSN4, Description = COP9 signalosome complex subunit 4, PFAM = PF01399)' T '30.11.1' 'signalling.light.COP9 signalosome' 'niben044scf00008200ctg012_18166-25177' '(at5g14250 : 469.0) Encodes subunit 3 of the COP9 signalosome.; CONSTITUTIVE PHOTOMORPHOGENIC 13 (COP13); CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); Has 402 Blast hits to 401 proteins in 151 species: Archae - 0; Bacteria - 0; Metazoa - 218; Fungi - 81; Plants - 54; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|37793 : 360.0) no description available & (reliability: 938.0) & (original description: Putative CSN3, Description = COP9 signalosome complex subunit 3, PFAM = PF01399)' T '30.11.1' 'signalling.light.COP9 signalosome' 'niben044scf00017992ctg001_13837-16402' '(at4g14110 : 161.0) Represses photomorphogenesis and induces skotomorphogenesis in the dark. A component of the COP9 signalosome complex.; CONSTITUTIVE PHOTOMORPHOGENIC 9 (COP9); CONTAINS InterPro DOMAIN/s: COP9 signalosome, subunit CSN8 (InterPro:IPR019280); Has 218 Blast hits to 218 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 136; Fungi - 17; Plants - 54; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|39615 : 158.0) no description available & (reliability: 322.0) & (original description: Putative COP9, Description = COP9 signalosome complex subunit 8, PFAM = PF10075)' T '30.11.1' 'signalling.light.COP9 signalosome' 'niben044scf00036003ctg001_12176-18984' '(gnl|cdd|35383 : 162.0) no description available & (at5g41790 : 141.0) encodes a protein that physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. expression is not regulated by light.; COP1-interactive protein 1 (CIP1); FUNCTIONS IN: protein binding; INVOLVED IN: regulation of protein import into nucleus; LOCATED IN: cytoskeleton, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G64330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31389 : 92.4) no description available & (reliability: 282.0) & (original description: Putative PGSC0003DMG400012303, Description = Putative myosin-4-like, PFAM = PF07765)' T '30.11.1' 'signalling.light.COP9 signalosome' 'niben044scf00052542ctg000_7241-13689' '(at5g56280 : 403.0) one of two genes encoding subunit 6 of COP9 signalosome complex. Protein contains a MPR1p and PAD1p N-terminal (MPN) domain at the N-terminal region and belongs to the Mov34 superfamily. Mutant and antisense expression result in a number of developmental defects and in ubiquitin/proteasome-mediated protein degradation.; COP9 signalosome subunit 6A (CSN6A); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: COP9 signalosome subunit 6B (TAIR:AT4G26430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38260 : 338.0) no description available & (reliability: 806.0) & (original description: Putative CSN6A, Description = COP9 signalosome complex subunit 6a, PFAM = PF13012;PF01398)' T '30.11.1' 'signalling.light.COP9 signalosome' 'niben101scf00222_10832-22194' '(at2g26990 : 629.0) Represses photomorphogenesis and induces skotomorphogenesis in the dark.; FUSCA 12 (FUS12); INVOLVED IN: cullin deneddylation, photomorphogenesis, protein catabolic process; LOCATED IN: signalosome, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143); BEST Arabidopsis thaliana protein match is: non-ATPase subunit 9 (TAIR:AT1G29150.1); Has 881 Blast hits to 877 proteins in 239 species: Archae - 2; Bacteria - 9; Metazoa - 323; Fungi - 235; Plants - 190; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|36677 : 606.0) no description available & (reliability: 1258.0) & (original description: Putative CSN2, Description = COP9 signalosome complex subunit 2, PFAM = PF01399)' T '30.11.1' 'signalling.light.COP9 signalosome' 'niben101scf00646_409185-415303' '(at4g14110 : 274.0) Represses photomorphogenesis and induces skotomorphogenesis in the dark. A component of the COP9 signalosome complex.; CONSTITUTIVE PHOTOMORPHOGENIC 9 (COP9); CONTAINS InterPro DOMAIN/s: COP9 signalosome, subunit CSN8 (InterPro:IPR019280); Has 218 Blast hits to 218 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 136; Fungi - 17; Plants - 54; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|39615 : 259.0) no description available & (reliability: 548.0) & (original description: Putative CSN8, Description = COP9 signalosome complex subunit 8, PFAM = PF10075)' T '30.11.1' 'signalling.light.COP9 signalosome' 'niben101scf00987_257765-269129' '(at5g43310 : 661.0) COP1-interacting protein-related; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: COP1-interacting protein 7 (TAIR:AT4G27430.2). & (reliability: 1322.0) & (original description: Putative PGSC0003DMG400017216, Description = COP1-interacting-like protein, PFAM = )' T '30.11.1' 'signalling.light.COP9 signalosome' 'niben101scf01159_16754-32686' '(at1g02090 : 342.0) encodes a phosphoprotein that is a subunit of the COP9 signalosome. Mutants exhibit constitutive photomorphogenic phenotype.; FUSCA 5 (FUS5); CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38460 : 294.0) no description available & (reliability: 684.0) & (original description: Putative CSN7, Description = COP9 signalosome complex subunit 7, PFAM = PF01399)' T '30.11.1' 'signalling.light.COP9 signalosome' 'niben101scf01371_600342-609953' '(at5g42970 : 563.0) encodes subunit 4 of COP9 signalosome complex. sequence is similar to a subunit of the 19S regulatory particle of the 26S proteasome. recessive mutation causes derepression of photomorphogenesis.; CONSTITUTIVE PHOTOMORPHOGENIC 8 (COP8); FUNCTIONS IN: protein binding; INVOLVED IN: cullin deneddylation, negative regulation of photomorphogenesis, G2 phase of mitotic cell cycle, photomorphogenesis; LOCATED IN: signalosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: regulatory particle non-ATPase subunit 5B (TAIR:AT5G64760.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36710 : 445.0) no description available & (reliability: 1126.0) & (original description: Putative CSN4, Description = COP9 signalosome complex subunit 4, PFAM = PF01399)' T '30.11.1' 'signalling.light.COP9 signalosome' 'niben101scf02187_166708-176846' '(at5g14250 : 469.0) Encodes subunit 3 of the COP9 signalosome.; CONSTITUTIVE PHOTOMORPHOGENIC 13 (COP13); CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); Has 402 Blast hits to 401 proteins in 151 species: Archae - 0; Bacteria - 0; Metazoa - 218; Fungi - 81; Plants - 54; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|37793 : 355.0) no description available & (reliability: 938.0) & (original description: Putative CSN3, Description = COP9 signalosome complex subunit 3, PFAM = PF01399)' T '30.11.1' 'signalling.light.COP9 signalosome' 'niben101scf02225_363892-372453' '(at2g26990 : 720.0) Represses photomorphogenesis and induces skotomorphogenesis in the dark.; FUSCA 12 (FUS12); INVOLVED IN: cullin deneddylation, photomorphogenesis, protein catabolic process; LOCATED IN: signalosome, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143); BEST Arabidopsis thaliana protein match is: non-ATPase subunit 9 (TAIR:AT1G29150.1); Has 881 Blast hits to 877 proteins in 239 species: Archae - 2; Bacteria - 9; Metazoa - 323; Fungi - 235; Plants - 190; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|36677 : 690.0) no description available & (gnl|cdd|34760 : 99.3) no description available & (reliability: 1440.0) & (original description: Putative CSN2, Description = COP9 signalosome complex subunit 2, PFAM = PF01399)' T '30.11.1' 'signalling.light.COP9 signalosome' 'niben101scf02525_320064-332778' '(at5g43310 : 639.0) COP1-interacting protein-related; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: COP1-interacting protein 7 (TAIR:AT4G27430.2). & (reliability: 1278.0) & (original description: Putative CIP7, Description = COP1-interacting protein-related, putative isoform 4, PFAM = )' T '30.11.1' 'signalling.light.COP9 signalosome' 'niben101scf02972_2447-8049' '(at5g41790 : 108.0) encodes a protein that physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. expression is not regulated by light.; COP1-interactive protein 1 (CIP1); FUNCTIONS IN: protein binding; INVOLVED IN: regulation of protein import into nucleus; LOCATED IN: cytoskeleton, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G64330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35383 : 81.4) no description available & (reliability: 216.0) & (original description: Putative PGSC0003DMG400005787, Description = Putative intracellular protein transport protein USO1-like, PFAM = PF07765)' T '30.11.1' 'signalling.light.COP9 signalosome' 'niben101scf03600_278653-286574' '(at5g14250 : 523.0) Encodes subunit 3 of the COP9 signalosome.; CONSTITUTIVE PHOTOMORPHOGENIC 13 (COP13); CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); Has 402 Blast hits to 401 proteins in 151 species: Archae - 0; Bacteria - 0; Metazoa - 218; Fungi - 81; Plants - 54; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|37793 : 386.0) no description available & (reliability: 1046.0) & (original description: Putative CSN3, Description = COP9 signalosome complex subunit 3, PFAM = PF01399)' T '30.11.1' 'signalling.light.COP9 signalosome' 'niben101scf03733_99603-107605' '(at5g56280 : 494.0) one of two genes encoding subunit 6 of COP9 signalosome complex. Protein contains a MPR1p and PAD1p N-terminal (MPN) domain at the N-terminal region and belongs to the Mov34 superfamily. Mutant and antisense expression result in a number of developmental defects and in ubiquitin/proteasome-mediated protein degradation.; COP9 signalosome subunit 6A (CSN6A); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: COP9 signalosome subunit 6B (TAIR:AT4G26430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38260 : 389.0) no description available & (reliability: 988.0) & (original description: Putative CSN6A, Description = COP9 signalosome complex subunit 6a, PFAM = PF13012;PF01398)' T '30.11.1' 'signalling.light.COP9 signalosome' 'niben101scf03985_263398-269880' '(at5g41790 : 164.0) encodes a protein that physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. expression is not regulated by light.; COP1-interactive protein 1 (CIP1); FUNCTIONS IN: protein binding; INVOLVED IN: regulation of protein import into nucleus; LOCATED IN: cytoskeleton, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G64330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35383 : 156.0) no description available & (gnl|cdd|31389 : 90.1) no description available & (reliability: 328.0) & (original description: Putative PGSC0003DMG400012303, Description = Putative myosin-4-like, PFAM = PF07765)' T '30.11.1' 'signalling.light.COP9 signalosome' 'niben101scf04010_152292-170467' '(at5g56280 : 470.0) one of two genes encoding subunit 6 of COP9 signalosome complex. Protein contains a MPR1p and PAD1p N-terminal (MPN) domain at the N-terminal region and belongs to the Mov34 superfamily. Mutant and antisense expression result in a number of developmental defects and in ubiquitin/proteasome-mediated protein degradation.; COP9 signalosome subunit 6A (CSN6A); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: COP9 signalosome subunit 6B (TAIR:AT4G26430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38260 : 392.0) no description available & (reliability: 940.0) & (original description: Putative CSN6A, Description = COP9 signalosome complex subunit 6a, PFAM = PF01398;PF13012)' T '30.11.1' 'signalling.light.COP9 signalosome' 'niben101scf04209_251057-255754' '(at5g41790 : 118.0) encodes a protein that physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. expression is not regulated by light.; COP1-interactive protein 1 (CIP1); FUNCTIONS IN: protein binding; INVOLVED IN: regulation of protein import into nucleus; LOCATED IN: cytoskeleton, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G64330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35383 : 91.8) no description available & (reliability: 236.0) & (original description: Putative PGSC0003DMG400004988, Description = Putative intracellular protein transport protein USO1-like, PFAM = PF07765)' T '30.11.1' 'signalling.light.COP9 signalosome' 'niben101scf05173_562534-572031' '(at1g02090 : 290.0) encodes a phosphoprotein that is a subunit of the COP9 signalosome. Mutants exhibit constitutive photomorphogenic phenotype.; FUSCA 5 (FUS5); CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38460 : 252.0) no description available & (reliability: 580.0) & (original description: Putative CSN7, Description = COP9 signalosome complex subunit 7, PFAM = PF01399)' T '30.11.1' 'signalling.light.COP9 signalosome' 'niben101scf05311_93961-106648' '(at1g22920 : 574.0) AJH1 encodes a protein similar to JAB1, a specific mammalian coactivator of AP-1 transcription. Encodes a subunit of the COP9 complex that is involved in protein deneddylation. Plants with mutations in CSN5A and CSN5B have a de-etiolated phenotype.; COP9 signalosome 5A (CSN5A); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: COP9-signalosome 5B (TAIR:AT1G71230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36767 : 552.0) no description available & (gnl|cdd|47561 : 127.0) no description available & (reliability: 1148.0) & (original description: Putative CSN5A, Description = COP9 signalosome complex subunit 5a, PFAM = PF01398)' T '30.11.1' 'signalling.light.COP9 signalosome' 'niben101scf06668_421443-426162' '(at5g41790 : 114.0) encodes a protein that physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. expression is not regulated by light.; COP1-interactive protein 1 (CIP1); FUNCTIONS IN: protein binding; INVOLVED IN: regulation of protein import into nucleus; LOCATED IN: cytoskeleton, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G64330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35383 : 95.3) no description available & (reliability: 228.0) & (original description: Putative PGSC0003DMG400004988, Description = Putative intracellular protein transport protein USO1-like, PFAM = PF07765)' T '30.11.1' 'signalling.light.COP9 signalosome' 'niben101scf06702_34888-52416' '(at1g22920 : 574.0) AJH1 encodes a protein similar to JAB1, a specific mammalian coactivator of AP-1 transcription. Encodes a subunit of the COP9 complex that is involved in protein deneddylation. Plants with mutations in CSN5A and CSN5B have a de-etiolated phenotype.; COP9 signalosome 5A (CSN5A); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: COP9-signalosome 5B (TAIR:AT1G71230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36767 : 550.0) no description available & (gnl|cdd|47561 : 127.0) no description available & (reliability: 1148.0) & (original description: Putative CSN5B, Description = COP9 signalosome complex subunit 5b, PFAM = PF01398)' T '30.11.1' 'signalling.light.COP9 signalosome' 'niben101scf09004_106429-126565' '(at2g26990 : 689.0) Represses photomorphogenesis and induces skotomorphogenesis in the dark.; FUSCA 12 (FUS12); INVOLVED IN: cullin deneddylation, photomorphogenesis, protein catabolic process; LOCATED IN: signalosome, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143); BEST Arabidopsis thaliana protein match is: non-ATPase subunit 9 (TAIR:AT1G29150.1); Has 881 Blast hits to 877 proteins in 239 species: Archae - 2; Bacteria - 9; Metazoa - 323; Fungi - 235; Plants - 190; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|36677 : 686.0) no description available & (gnl|cdd|34760 : 103.0) no description available & (reliability: 1378.0) & (original description: Putative CSN2, Description = COP9 signalosome complex subunit 2, PFAM = PF01399)' T '30.11.1' 'signalling.light.COP9 signalosome' 'niben101scf15067_517812-523767' '(at3g61140 : 660.0) Represses photomorphogenesis and induces skotomorphogenesis in the dark. Component of the nuclear-localized COP9 complex. Mutants display striking purple coloration due to anthocyanin accumulation in their cotyledons, first become defective during embryogenesis and exhibit limited seedling development.; FUSCA 6 (FUS6); CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), 26S proteasome, regulatory subunit Rpn7 (InterPro:IPR019585); BEST Arabidopsis thaliana protein match is: COP9 signalosome complex-related / CSN complex-related (TAIR:AT3G12850.1); Has 1199 Blast hits to 1198 proteins in 240 species: Archae - 0; Bacteria - 0; Metazoa - 515; Fungi - 231; Plants - 316; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (gnl|cdd|35905 : 467.0) no description available & (gnl|cdd|34786 : 89.3) no description available & (reliability: 1320.0) & (original description: Putative CSN1, Description = COP9 signalosome complex subunit 1, PFAM = PF10602;PF01399)' T '30.11.2' 'signalling.light.red light' '' '' '30.11.3' 'signalling.light.blue light' '' '' '30.12' 'signalling.gravity' 'nbv0.3scaffold57335_2243-11640' '(at1g68370 : 284.0) DnaJ-like protein with homology to coiled coils found in cytoskeleton-interacting proteins.; ALTERED RESPONSE TO GRAVITY 1 (ARG1); CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: ARG1-like 1 (TAIR:AT1G24120.1); Has 24672 Blast hits to 24665 proteins in 3308 species: Archae - 176; Bacteria - 9653; Metazoa - 4287; Fungi - 2463; Plants - 2622; Viruses - 27; Other Eukaryotes - 5444 (source: NCBI BLink). & (gnl|cdd|35932 : 148.0) no description available & (reliability: 568.0) & (original description: Putative ARG1, Description = Chaperone protein dnaJ 15, PFAM = PF00226)' T '30.12' 'signalling.gravity' 'niben101scf00307_368993-397444' '(at1g68370 : 614.0) DnaJ-like protein with homology to coiled coils found in cytoskeleton-interacting proteins.; ALTERED RESPONSE TO GRAVITY 1 (ARG1); CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: ARG1-like 1 (TAIR:AT1G24120.1); Has 24672 Blast hits to 24665 proteins in 3308 species: Archae - 176; Bacteria - 9653; Metazoa - 4287; Fungi - 2463; Plants - 2622; Viruses - 27; Other Eukaryotes - 5444 (source: NCBI BLink). & (gnl|cdd|35932 : 313.0) no description available & (gnl|cdd|30832 : 113.0) no description available & (reliability: 1228.0) & (original description: Putative ATJ15, Description = Chaperone protein dnaJ 15, PFAM = PF00226)' T '30.12' 'signalling.gravity' 'niben101scf05731_93-9891' '(at1g68370 : 605.0) DnaJ-like protein with homology to coiled coils found in cytoskeleton-interacting proteins.; ALTERED RESPONSE TO GRAVITY 1 (ARG1); CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: ARG1-like 1 (TAIR:AT1G24120.1); Has 24672 Blast hits to 24665 proteins in 3308 species: Archae - 176; Bacteria - 9653; Metazoa - 4287; Fungi - 2463; Plants - 2622; Viruses - 27; Other Eukaryotes - 5444 (source: NCBI BLink). & (gnl|cdd|35932 : 311.0) no description available & (gnl|cdd|30832 : 113.0) no description available & (reliability: 1210.0) & (original description: Putative ATJ15, Description = Chaperone protein dnaJ 15, PFAM = PF00226)' T '30.13' 'signalling.stress' '' '' '30.13.1' 'signalling.stress.biotic' '' '' '30.13.2' 'signalling.stress.abiotic' '' '' '30.14' 'signalling.cyclic nucleotides' '' '' '30.99' 'signalling.unspecified' 'nbv0.3scaffold74767_521-6003' '(at1g78610 : 715.0) mechanosensitive channel of small conductance-like 6 (MSL6); INVOLVED IN: transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Membrane protein, At2g17000, predicted (InterPro:IPR016688), Mechanosensitive ion channel MscS (InterPro:IPR006685), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: mechanosensitive channel of small conductance-like 4 (TAIR:AT1G53470.1); Has 3617 Blast hits to 3602 proteins in 1077 species: Archae - 172; Bacteria - 2574; Metazoa - 1; Fungi - 205; Plants - 217; Viruses - 0; Other Eukaryotes - 448 (source: NCBI BLink). & (gnl|cdd|39829 : 652.0) no description available & (gnl|cdd|64773 : 86.0) no description available & (reliability: 1430.0) & (original description: Putative MSL4, Description = Mechanosensitive ion channel protein 4, PFAM = PF00924)' T '30.99' 'signalling.unspecified' 'nbv0.5scaffold5273_47382-90943' '(at4g24580 : 365.0) Encodes a Rho GTPase-activating protein that interacts with ROP1 (a Rho GTPase) and regulates pollen tube development. This protein can be observed at the apical tip of growing pollen tubes and on endocytic vesicles traveling to this region of the pollen tube.; ROP1 ENHANCER 1 (REN1); CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Rho GTPase activation protein (RhoGAP) with PH domain (TAIR:AT5G12150.1); Has 23967 Blast hits to 18190 proteins in 1193 species: Archae - 153; Bacteria - 3871; Metazoa - 11779; Fungi - 2242; Plants - 901; Viruses - 71; Other Eukaryotes - 4950 (source: NCBI BLink). & (gnl|cdd|39472 : 187.0) no description available & (gnl|cdd|84905 : 86.8) no description available & (reliability: 730.0) & (original description: Putative REN1, Description = Pleckstrin homology domain-containing protein, PFAM = PF00169;PF00620)' T '30.99' 'signalling.unspecified' 'nbv0.5scaffold5273_66917-91068' '(at5g12150 : 150.0) Encodes a protein with similarity to REN1, a Rho GTPase activating protein.; Rho GTPase activation protein (RhoGAP) with PH domain; FUNCTIONS IN: Rho GTPase activator activity, phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Rho GTPase activation protein (InterPro:IPR008936), Pleckstrin homology (InterPro:IPR001849), RhoGAP (InterPro:IPR000198); BEST Arabidopsis thaliana protein match is: Rho GTPase activation protein (RhoGAP) with PH domain (TAIR:AT5G19390.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative REN1, Description = Pleckstrin homology domain-containing protein, PFAM = PF00169)' T '30.99' 'signalling.unspecified' 'niben044scf00005538ctg002_1-5897' '(at1g78610 : 691.0) mechanosensitive channel of small conductance-like 6 (MSL6); INVOLVED IN: transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Membrane protein, At2g17000, predicted (InterPro:IPR016688), Mechanosensitive ion channel MscS (InterPro:IPR006685), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: mechanosensitive channel of small conductance-like 4 (TAIR:AT1G53470.1); Has 3617 Blast hits to 3602 proteins in 1077 species: Archae - 172; Bacteria - 2574; Metazoa - 1; Fungi - 205; Plants - 217; Viruses - 0; Other Eukaryotes - 448 (source: NCBI BLink). & (gnl|cdd|39829 : 656.0) no description available & (gnl|cdd|64773 : 89.9) no description available & (reliability: 1382.0) & (original description: Putative MSL6, Description = Mechanosensitive ion channel protein 6, PFAM = PF00924)' T '30.99' 'signalling.unspecified' 'niben044scf00008837ctg024_4661-7832' '(at2g20410 : 179.0) RNA-binding ASCH domain protein; CONTAINS InterPro DOMAIN/s: ASCH domain (InterPro:IPR007374); Has 281 Blast hits to 281 proteins in 129 species: Archae - 2; Bacteria - 93; Metazoa - 106; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative At2g20410, Description = Activating signal cointegrator-related family protein, PFAM = )' T '30.99' 'signalling.unspecified' 'niben044scf00029621ctg009_1-14351' '(at4g24580 : 610.0) Encodes a Rho GTPase-activating protein that interacts with ROP1 (a Rho GTPase) and regulates pollen tube development. This protein can be observed at the apical tip of growing pollen tubes and on endocytic vesicles traveling to this region of the pollen tube.; ROP1 ENHANCER 1 (REN1); CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Rho GTPase activation protein (RhoGAP) with PH domain (TAIR:AT5G12150.1); Has 23967 Blast hits to 18190 proteins in 1193 species: Archae - 153; Bacteria - 3871; Metazoa - 11779; Fungi - 2242; Plants - 901; Viruses - 71; Other Eukaryotes - 4950 (source: NCBI BLink). & (gnl|cdd|39472 : 327.0) no description available & (gnl|cdd|63840 : 114.0) no description available & (reliability: 1220.0) & (original description: Putative ROPGAP6, Description = Rho GTPase-activating protein 6, PFAM = PF00169;PF00620;PF14389)' T '30.99' 'signalling.unspecified' 'niben101scf00057_62991-69016' '(at3g14810 : 701.0) mechanosensitive channel of small conductance-like 5 (MSL5); INVOLVED IN: transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Membrane protein, At2g17000, predicted (InterPro:IPR016688), Mechanosensitive ion channel MscS (InterPro:IPR006685), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: mechanosensitive channel of small conductance-like 4 (TAIR:AT1G53470.1). & (gnl|cdd|39829 : 638.0) no description available & (gnl|cdd|64773 : 90.7) no description available & (reliability: 1394.0) & (original description: Putative MSL6, Description = Mechanosensitive ion channel protein 6, PFAM = PF00924)' T '30.99' 'signalling.unspecified' 'niben101scf00057_96350-102319' '(at1g78610 : 498.0) mechanosensitive channel of small conductance-like 6 (MSL6); INVOLVED IN: transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Membrane protein, At2g17000, predicted (InterPro:IPR016688), Mechanosensitive ion channel MscS (InterPro:IPR006685), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: mechanosensitive channel of small conductance-like 4 (TAIR:AT1G53470.1); Has 3617 Blast hits to 3602 proteins in 1077 species: Archae - 172; Bacteria - 2574; Metazoa - 1; Fungi - 205; Plants - 217; Viruses - 0; Other Eukaryotes - 448 (source: NCBI BLink). & (gnl|cdd|39829 : 433.0) no description available & (gnl|cdd|64773 : 89.5) no description available & (reliability: 996.0) & (original description: Putative MSL4, Description = Mechanosensitive ion channel protein 8, PFAM = PF00924)' T '30.99' 'signalling.unspecified' 'niben101scf00057_97205-101405' '(gnl|cdd|39829 : 153.0) no description available & (at2g17010 : 139.0) Mechanosensitive ion channel family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Membrane protein, At2g17000, predicted (InterPro:IPR016688), Mechanosensitive ion channel MscS (InterPro:IPR006685), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Mechanosensitive ion channel family protein (TAIR:AT2G17000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative MSL4, Description = Mechanosensitive ion channel protein 8, PFAM = PF00924)' T '30.99' 'signalling.unspecified' 'niben101scf00807_348311-353793' '(at1g78610 : 693.0) mechanosensitive channel of small conductance-like 6 (MSL6); INVOLVED IN: transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Membrane protein, At2g17000, predicted (InterPro:IPR016688), Mechanosensitive ion channel MscS (InterPro:IPR006685), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: mechanosensitive channel of small conductance-like 4 (TAIR:AT1G53470.1); Has 3617 Blast hits to 3602 proteins in 1077 species: Archae - 172; Bacteria - 2574; Metazoa - 1; Fungi - 205; Plants - 217; Viruses - 0; Other Eukaryotes - 448 (source: NCBI BLink). & (gnl|cdd|39829 : 642.0) no description available & (gnl|cdd|64773 : 86.0) no description available & (reliability: 1386.0) & (original description: Putative MSL4, Description = Mechanosensitive ion channel protein 10, PFAM = PF00924)' T '30.99' 'signalling.unspecified' 'niben101scf01267_333568-392812' '(at4g24580 : 239.0) Encodes a Rho GTPase-activating protein that interacts with ROP1 (a Rho GTPase) and regulates pollen tube development. This protein can be observed at the apical tip of growing pollen tubes and on endocytic vesicles traveling to this region of the pollen tube.; ROP1 ENHANCER 1 (REN1); CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Rho GTPase activation protein (RhoGAP) with PH domain (TAIR:AT5G12150.1); Has 23967 Blast hits to 18190 proteins in 1193 species: Archae - 153; Bacteria - 3871; Metazoa - 11779; Fungi - 2242; Plants - 901; Viruses - 71; Other Eukaryotes - 4950 (source: NCBI BLink). & (gnl|cdd|39472 : 174.0) no description available & (gnl|cdd|84905 : 84.5) no description available & (reliability: 478.0) & (original description: Putative REN1, Description = Pleckstrin homology domain-containing protein, PFAM = PF00620)' T '30.99' 'signalling.unspecified' 'niben101scf01580_255497-261713' '(at1g78610 : 696.0) mechanosensitive channel of small conductance-like 6 (MSL6); INVOLVED IN: transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Membrane protein, At2g17000, predicted (InterPro:IPR016688), Mechanosensitive ion channel MscS (InterPro:IPR006685), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: mechanosensitive channel of small conductance-like 4 (TAIR:AT1G53470.1); Has 3617 Blast hits to 3602 proteins in 1077 species: Archae - 172; Bacteria - 2574; Metazoa - 1; Fungi - 205; Plants - 217; Viruses - 0; Other Eukaryotes - 448 (source: NCBI BLink). & (gnl|cdd|39829 : 655.0) no description available & (gnl|cdd|64773 : 89.9) no description available & (reliability: 1392.0) & (original description: Putative MSL6, Description = Mechanosensitive ion channel protein 6, PFAM = PF00924)' T '30.99' 'signalling.unspecified' 'niben101scf02625_588954-600454' '(at5g05850 : 404.0) Encodes PIRL1, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction. PIRL1 (AT5G05850) and PIRL9 (AT3G11330) are genetically redundant and are required for differentiation of microspores into pollen.; plant intracellular ras group-related LRR 1 (PIRL1); INVOLVED IN: microgametogenesis, pollen development; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 9 (TAIR:AT3G11330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35693 : 135.0) no description available & (gnl|cdd|34495 : 91.6) no description available & (reliability: 808.0) & (original description: Putative PIRL1, Description = Plant intracellular Ras-group-related LRR protein 1, PFAM = PF13855;PF13855)' T '30.99' 'signalling.unspecified' 'niben101scf02659_244469-270471' '(at4g24580 : 636.0) Encodes a Rho GTPase-activating protein that interacts with ROP1 (a Rho GTPase) and regulates pollen tube development. This protein can be observed at the apical tip of growing pollen tubes and on endocytic vesicles traveling to this region of the pollen tube.; ROP1 ENHANCER 1 (REN1); CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Rho GTPase activation protein (RhoGAP) with PH domain (TAIR:AT5G12150.1); Has 23967 Blast hits to 18190 proteins in 1193 species: Archae - 153; Bacteria - 3871; Metazoa - 11779; Fungi - 2242; Plants - 901; Viruses - 71; Other Eukaryotes - 4950 (source: NCBI BLink). & (gnl|cdd|39472 : 325.0) no description available & (gnl|cdd|84905 : 114.0) no description available & (reliability: 1272.0) & (original description: Putative REN1, Description = Rho GTPase-activating protein REN1, PFAM = PF00169;PF14389;PF00620)' T '30.99' 'signalling.unspecified' 'niben101scf04628_80119-85890' '(at5g05850 : 442.0) Encodes PIRL1, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction. PIRL1 (AT5G05850) and PIRL9 (AT3G11330) are genetically redundant and are required for differentiation of microspores into pollen.; plant intracellular ras group-related LRR 1 (PIRL1); INVOLVED IN: microgametogenesis, pollen development; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 9 (TAIR:AT3G11330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35693 : 132.0) no description available & (gnl|cdd|34495 : 88.1) no description available & (reliability: 884.0) & (original description: Putative PIRL1, Description = Plant intracellular Ras-group-related LRR protein 1, PFAM = PF13855;PF13855;PF13855)' T '30.99' 'signalling.unspecified' 'niben101scf06779_355041-361624' '(at2g20410 : 253.0) RNA-binding ASCH domain protein; CONTAINS InterPro DOMAIN/s: ASCH domain (InterPro:IPR007374); Has 281 Blast hits to 281 proteins in 129 species: Archae - 2; Bacteria - 93; Metazoa - 106; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative mal, Description = Activating signal cointegrator 1, PFAM = PF04266)' T '30.99' 'signalling.unspecified' 'niben101scf06790_22358-86794' '(at4g24580 : 356.0) Encodes a Rho GTPase-activating protein that interacts with ROP1 (a Rho GTPase) and regulates pollen tube development. This protein can be observed at the apical tip of growing pollen tubes and on endocytic vesicles traveling to this region of the pollen tube.; ROP1 ENHANCER 1 (REN1); CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Rho GTPase activation protein (RhoGAP) with PH domain (TAIR:AT5G12150.1); Has 23967 Blast hits to 18190 proteins in 1193 species: Archae - 153; Bacteria - 3871; Metazoa - 11779; Fungi - 2242; Plants - 901; Viruses - 71; Other Eukaryotes - 4950 (source: NCBI BLink). & (gnl|cdd|39472 : 244.0) no description available & (gnl|cdd|84905 : 112.0) no description available & (reliability: 712.0) & (original description: Putative REN1, Description = Pleckstrin homology domain-containing protein, PFAM = PF00620;PF14389)' T '30.99' 'signalling.unspecified' 'niben101scf06981_19465-26459' '(at1g78610 : 793.0) mechanosensitive channel of small conductance-like 6 (MSL6); INVOLVED IN: transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Membrane protein, At2g17000, predicted (InterPro:IPR016688), Mechanosensitive ion channel MscS (InterPro:IPR006685), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: mechanosensitive channel of small conductance-like 4 (TAIR:AT1G53470.1); Has 3617 Blast hits to 3602 proteins in 1077 species: Archae - 172; Bacteria - 2574; Metazoa - 1; Fungi - 205; Plants - 217; Viruses - 0; Other Eukaryotes - 448 (source: NCBI BLink). & (gnl|cdd|39829 : 678.0) no description available & (gnl|cdd|64773 : 104.0) no description available & (reliability: 1586.0) & (original description: Putative MSL8, Description = Mechanosensitive ion channel protein 8, PFAM = PF00924)' T '30.99' 'signalling.unspecified' 'niben101scf07018_623255-649344' '(at5g05930 : 267.0) guanylyl cyclase 1 (GC1); CONTAINS InterPro DOMAIN/s: Guanylyl cyclase (InterPro:IPR018616); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39821 : 175.0) no description available & (reliability: 534.0) & (original description: Putative , Description = Guanylyl cyclase, PFAM = PF09778)' T '30.99' 'signalling.unspecified' 'niben101scf07018_623401-649439' '(at5g05930 : 268.0) guanylyl cyclase 1 (GC1); CONTAINS InterPro DOMAIN/s: Guanylyl cyclase (InterPro:IPR018616); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39821 : 176.0) no description available & (reliability: 536.0) & (original description: Putative , Description = Guanylyl cyclase, PFAM = PF09778)' T '30.99' 'signalling.unspecified' 'niben101scf07671_132884-137974' '(at4g24580 : 80.5) Encodes a Rho GTPase-activating protein that interacts with ROP1 (a Rho GTPase) and regulates pollen tube development. This protein can be observed at the apical tip of growing pollen tubes and on endocytic vesicles traveling to this region of the pollen tube.; ROP1 ENHANCER 1 (REN1); CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Rho GTPase activation protein (RhoGAP) with PH domain (TAIR:AT5G12150.1); Has 23967 Blast hits to 18190 proteins in 1193 species: Archae - 153; Bacteria - 3871; Metazoa - 11779; Fungi - 2242; Plants - 901; Viruses - 71; Other Eukaryotes - 4950 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative REN1, Description = Pleckstrin homology domain-containing family protein, PFAM = PF00169)' T '30.99' 'signalling.unspecified' 'niben101scf11108_56089-64983' '(at5g12080 : 637.0) mechanosensitive channel of small conductance-like 10 (MSL10); FUNCTIONS IN: mechanically-gated ion channel activity; INVOLVED IN: detection of mechanical stimulus; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Membrane protein, At2g17000, predicted (InterPro:IPR016688), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920), Mechanosensitive ion channel MscS (InterPro:IPR006685); BEST Arabidopsis thaliana protein match is: mechanosensitive channel of small conductance-like 9 (TAIR:AT5G19520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39829 : 562.0) no description available & (gnl|cdd|64773 : 89.5) no description available & (reliability: 1274.0) & (original description: Putative MSL10, Description = Mechanosensitive ion channel protein 10, PFAM = PF00924)' T '30.99' 'signalling.unspecified' 'niben101scf24948_18418-45003' '(at5g05930 : 270.0) guanylyl cyclase 1 (GC1); CONTAINS InterPro DOMAIN/s: Guanylyl cyclase (InterPro:IPR018616); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39821 : 173.0) no description available & (reliability: 540.0) & (original description: Putative , Description = Guanylyl cyclase, PFAM = PF09778)' T '30.1001' 'signaling' 'camp' 'Second messenger signaling pathway; MAPK signaling pathway; purine metabolism; cell cycle' M '30.1002' 'signaling' 'n-butyryl-homoserine lactone' 'signaling, HOMOSERINE LACTONE-MEDIATED GENE REGULATION IN PLANT-ASSOCIATED BACTERIA' M '30.1003' 'signaling' 'n-decanoyl-homoserine lactone' 'signaling, HOMOSERINE LACTONE-MEDIATED GENE REGULATION IN PLANT-ASSOCIATED BACTERIA' M '30.1004' 'signaling' 'n-dodecanoyl-homoserine lactone' 'signaling, HOMOSERINE LACTONE-MEDIATED GENE REGULATION IN PLANT-ASSOCIATED BACTERIA' M '30.1005' 'signaling' 'n-heptanoyl-homoserine lactone' 'signaling, HOMOSERINE LACTONE-MEDIATED GENE REGULATION IN PLANT-ASSOCIATED BACTERIA' M '30.1006' 'signaling' 'n-hexanoyl-homoserine lactone' 'signaling, HOMOSERINE LACTONE-MEDIATED GENE REGULATION IN PLANT-ASSOCIATED BACTERIA' M '30.1007' 'signaling' 'n-(beta-oxoocaproyl)-homoserine lactone' 'signaling, HOMOSERINE LACTONE-MEDIATED GENE REGULATION IN PLANT-ASSOCIATED BACTERIA' M '30.1008' 'signaling' 'n-octanoyl-homoserine lactone' 'signaling, HOMOSERINE LACTONE-MEDIATED GENE REGULATION IN PLANT-ASSOCIATED BACTERIA' M '30.1009' 'signaling' 'n-tetradecanoyl-homoserine lactone' 'signaling, HOMOSERINE LACTONE-MEDIATED GENE REGULATION IN PLANT-ASSOCIATED BACTERIA' M '31' 'cell' 'nbv0.5scaffold6581_8443-12107' '(at5g52060 : 298.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 1 (BAG1); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 3 (TAIR:AT5G07220.1); Has 385 Blast hits to 385 proteins in 61 species: Archae - 0; Bacteria - 4; Metazoa - 126; Fungi - 8; Plants - 222; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|39562 : 154.0) no description available & (gnl|cdd|29214 : 102.0) no description available & (reliability: 542.0) & (original description: Putative BAG1, Description = BAG family molecular chaperone regulator 1, PFAM = PF00240;PF02179)' T '31' 'cell' 'niben101scf00627_573491-577311' '(at5g52060 : 273.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 1 (BAG1); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 3 (TAIR:AT5G07220.1); Has 385 Blast hits to 385 proteins in 61 species: Archae - 0; Bacteria - 4; Metazoa - 126; Fungi - 8; Plants - 222; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|39562 : 139.0) no description available & (gnl|cdd|29214 : 96.1) no description available & (reliability: 498.0) & (original description: Putative BAG1, Description = BAG family molecular chaperone regulator 1, PFAM = PF00240;PF02179)' T '31' 'cell' 'niben101scf05824_1576462-1583939' '(at5g07220 : 170.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 3 (BAG3); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 2 (TAIR:AT5G62100.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29214 : 96.4) no description available & (gnl|cdd|39562 : 89.7) no description available & (reliability: 332.0) & (original description: Putative Sb03g038830, Description = Putative uncharacterized protein Sb03g038830, PFAM = PF02179;PF00240)' T '31' 'cell' 'niben101scf05824_1576563-1583936' '(at5g07220 : 150.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 3 (BAG3); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 2 (TAIR:AT5G62100.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29214 : 97.2) no description available & (gnl|cdd|39562 : 83.2) no description available & (reliability: 284.0) & (original description: Putative BAG1, Description = BAG family molecular chaperone regulator, PFAM = PF00240;PF02179)' T '31' 'cell' 'niben101scf07391_11358-15266' '(at5g07220 : 201.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 3 (BAG3); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 2 (TAIR:AT5G62100.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39562 : 127.0) no description available & (gnl|cdd|29214 : 91.0) no description available & (reliability: 370.0) & (original description: Putative BAG1, Description = BAG family molecular chaperone regulator 1, PFAM = PF00240;PF02179)' T '31' 'cell' 'niben101scf10753_109000-113117' '(at5g07220 : 204.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 3 (BAG3); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 2 (TAIR:AT5G62100.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39562 : 126.0) no description available & (gnl|cdd|29214 : 91.4) no description available & (reliability: 374.0) & (original description: Putative BAG3, Description = BAG family molecular chaperone regulator 3, PFAM = PF00240;PF02179)' T '31.1' 'cell.organisation' 'nbv0.3scaffold912_14322-23351' '(at2g34560 : 527.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G80350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35957 : 451.0) no description available & (gnl|cdd|30812 : 233.0) no description available & (q96372|cdc48_capan : 176.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 1054.0) & (original description: Putative KAT2, Description = Katanin p60 catalytic subunit, PFAM = PF00004)' T '31.1' 'cell.organisation' 'nbv0.3scaffold2651_36654-42604' '(gnl|cdd|29162 : 183.0) no description available & (gnl|cdd|36867 : 181.0) no description available & (at4g16520 : 177.0) autophagy 8f (ATG8F); CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT3G60640.1); Has 1518 Blast hits to 1516 proteins in 273 species: Archae - 0; Bacteria - 0; Metazoa - 724; Fungi - 178; Plants - 302; Viruses - 3; Other Eukaryotes - 311 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative ATG8F, Description = Autophagy-related protein 8f, PFAM = PF02991)' T '31.1' 'cell.organisation' 'nbv0.3scaffold2708_67420-75209' '(at1g43700 : 173.0) Encodes a VirE2-interacting protein. VIP1 mediates nuclear translocation of VirE2 via its amino half, and interacts with histone H2A via it carboxyl half.; VIRE2-interacting protein 1 (VIP1); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to sulfate starvation, sulfate transport, DNA mediated transformation, nuclear import; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT1G06070.1); Has 1450 Blast hits to 1450 proteins in 153 species: Archae - 0; Bacteria - 51; Metazoa - 59; Fungi - 47; Plants - 1254; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 162.0) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 346.0) & (original description: Putative rsg, Description = BZIP transcriptional activator RSG, PFAM = PF00170)' T '31.1' 'cell.organisation' 'nbv0.3scaffold2708_68705-74703' '(at1g43700 : 139.0) Encodes a VirE2-interacting protein. VIP1 mediates nuclear translocation of VirE2 via its amino half, and interacts with histone H2A via it carboxyl half.; VIRE2-interacting protein 1 (VIP1); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to sulfate starvation, sulfate transport, DNA mediated transformation, nuclear import; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT1G06070.1); Has 1450 Blast hits to 1450 proteins in 153 species: Archae - 0; Bacteria - 51; Metazoa - 59; Fungi - 47; Plants - 1254; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 128.0) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 278.0) & (original description: Putative rsg, Description = BZIP transcription factor, PFAM = PF00170)' T '31.1' 'cell.organisation' 'nbv0.3scaffold4113_12325-20923' '(at1g73860 : 779.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; EXPRESSED IN: petal, sepal, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G18410.1); Has 138507 Blast hits to 76202 proteins in 2961 species: Archae - 1220; Bacteria - 20098; Metazoa - 63175; Fungi - 11698; Plants - 7059; Viruses - 430; Other Eukaryotes - 34827 (source: NCBI BLink). & (gnl|cdd|35460 : 447.0) no description available & (gnl|cdd|30088 : 424.0) no description available & (p46869|fla10_chlre : 173.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1558.0) & (original description: Putative kch2, Description = Kinesin-like protein, PFAM = PF00225;PF00307)' T '31.1' 'cell.organisation' 'nbv0.3scaffold4427_17078-21043' '(at2g18280 : 484.0) Member of TLP family; tubby like protein 2 (TLP2); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 3 (TAIR:AT2G47900.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37713 : 412.0) no description available & (gnl|cdd|85281 : 291.0) no description available & (reliability: 968.0) & (original description: Putative TULP5, Description = Tubby-like F-box protein 5, PFAM = PF01167;PF00646)' T '31.1' 'cell.organisation' 'nbv0.3scaffold5452_12485-17639' '(at1g12710 : 367.0) This gene is predicted to encode a protein with a PP2 domain. This domain in present in lectins found in squash and cucumber, suggesting that this protein could potentially have carbohydrate binding capabilities.; phloem protein 2-A12 (PP2-A12); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: phloem protein 2-A11 (TAIR:AT1G63090.1); Has 458 Blast hits to 452 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 456; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 734.0) & (original description: Putative P2A12, Description = F-box protein PP2-A12, PFAM = PF14299)' T '31.1' 'cell.organisation' 'nbv0.3scaffold6012_18886-24159' '(at4g19150 : 179.0) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G09890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29261 : 118.0) no description available & (gnl|cdd|39379 : 98.5) no description available & (reliability: 358.0) & (original description: Putative ANK, Description = Ankrin, PFAM = PF13637;PF12796)' T '31.1' 'cell.organisation' 'nbv0.3scaffold7919_41139-47592' '(at3g54170 : 114.0) Encodes protein that binds FKBP12. This interaction is disrupted by FK506 but not by cyclosporin A.; FKBP12 interacting protein 37 (FIP37); Has 21268 Blast hits to 13212 proteins in 1142 species: Archae - 433; Bacteria - 2157; Metazoa - 10991; Fungi - 1638; Plants - 938; Viruses - 51; Other Eukaryotes - 5060 (source: NCBI BLink). & (gnl|cdd|38202 : 85.2) no description available & (reliability: 228.0) & (original description: Putative FIP37, Description = FKBP12-interacting protein of 37 kDa, PFAM = )' T '31.1' 'cell.organisation' 'nbv0.3scaffold7993_44001-53491' '(at1g59540 : 801.0) Encodes a kinesin-like protein.; ZCF125; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30096 : 457.0) no description available & (gnl|cdd|35463 : 427.0) no description available & (p46869|fla10_chlre : 241.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1602.0) & (original description: Putative KIN7N, Description = Kinesin-like protein KIN-7N, PFAM = PF00225)' T '31.1' 'cell.organisation' 'nbv0.3scaffold10733_12592-17234' '(o82572|prof1_ricco : 221.0) Profilin-1 - Ricinus communis (Castor bean) & (at5g56600 : 192.0) Encodes profilin3, a low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton. Originally known as profilin5, and later named profilin3. Expressed in vegetative organs.; profilin 3 (PRF3); FUNCTIONS IN: actin binding; INVOLVED IN: cytoskeleton organization, actin cytoskeleton organization; LOCATED IN: nucleus, actin cytoskeleton, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Profilin/allergen (InterPro:IPR002097), Profilin, plant (InterPro:IPR005455); BEST Arabidopsis thaliana protein match is: profilin 1 (TAIR:AT2G19760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36966 : 167.0) no description available & (gnl|cdd|84632 : 154.0) no description available & (reliability: 384.0) & (original description: Putative pf1, Description = Profilin, PFAM = PF00235)' T '31.1' 'cell.organisation' 'nbv0.3scaffold12146_2219-6549' '(at1g70140 : 451.0) Encodes a group I formin. Binds to F-actin barbed ends. Has severing actin filaments activity. Binds profilin. Involved in the initiation and tip growth of root hairs through regulation of actin cytoskeleton.; formin 8 (FH8); FUNCTIONS IN: actin binding, profilin binding, actin filament binding; INVOLVED IN: actin nucleation, cell tip growth; LOCATED IN: cell-cell junction, plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin homologue 4 (TAIR:AT1G24150.1); Has 22376 Blast hits to 12386 proteins in 831 species: Archae - 31; Bacteria - 2621; Metazoa - 7710; Fungi - 2231; Plants - 6132; Viruses - 1038; Other Eukaryotes - 2613 (source: NCBI BLink). & (gnl|cdd|85898 : 326.0) no description available & (gnl|cdd|37133 : 286.0) no description available & (reliability: 902.0) & (original description: Putative FH8, Description = Formin-like protein 8, PFAM = PF02181;PF06003)' T '31.1' 'cell.organisation' 'nbv0.3scaffold12608_1-6301' '(at2g33385 : 274.0) actin-related protein C2B (arpc2b); CONTAINS InterPro DOMAIN/s: Arp2/3 complex, 34kDa subunit p34-Arc (InterPro:IPR007188); BEST Arabidopsis thaliana protein match is: Arp2/3 complex, 34 kD subunit p34-Arc (TAIR:AT1G30825.1). & (reliability: 548.0) & (original description: Putative ARPC2B, Description = ARPC2B, PFAM = PF04045)' T '31.1' 'cell.organisation' 'nbv0.3scaffold13326_15018-33130' '(at5g07740 : 676.0) actin binding; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; EXPRESSED IN: shoot apex, stem; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Tensin phosphatase, C2 domain (InterPro:IPR014020), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 protein (TAIR:AT5G07770.1). & (gnl|cdd|85898 : 378.0) no description available & (gnl|cdd|37135 : 288.0) no description available & (reliability: 1352.0) & (original description: Putative FH19, Description = Formin-like protein 19, PFAM = PF10409;PF02181)' T '31.1' 'cell.organisation' 'nbv0.3scaffold13657_15610-19036' '(at3g04710 : 152.0) ankyrin repeat family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Tetratricopeptide-like helical (InterPro:IPR011990), Ankyrin repeat-containing domain (InterPro:IPR020683), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1685) (TAIR:AT3G04700.1). & (gnl|cdd|71376 : 109.0) no description available & (reliability: 304.0) & (original description: Putative , Description = , PFAM = PF07939)' T '31.1' 'cell.organisation' 'nbv0.3scaffold14812_27843-36795' '(at3g60830 : 588.0) Encodes an actin-related protein required for normal embryogenesis, plant architecture and floral organ abscission.; actin-related protein 7 (ARP7); CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 12219 Blast hits to 11995 proteins in 2504 species: Archae - 0; Bacteria - 50; Metazoa - 5224; Fungi - 3189; Plants - 1407; Viruses - 2; Other Eukaryotes - 2347 (source: NCBI BLink). & (gnl|cdd|35895 : 306.0) no description available & (gnl|cdd|28896 : 273.0) no description available & (p30173|act13_soltu : 231.0) Actin-101 - Solanum tuberosum (Potato) & (reliability: 1176.0) & (original description: Putative ARP7, Description = Actin-related protein 7, PFAM = PF00022;PF00022)' T '31.1' 'cell.organisation' 'nbv0.3scaffold15191_4006-9918' '(at5g65860 : 530.0) ankyrin repeat family protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Arginine N-methyltransferase 2 (InterPro:IPR017408), Methyltransferase type 11 (InterPro:IPR013216), Ankyrin repeat (InterPro:IPR002110); Has 14669 Blast hits to 7820 proteins in 738 species: Archae - 65; Bacteria - 1760; Metazoa - 7798; Fungi - 1170; Plants - 439; Viruses - 38; Other Eukaryotes - 3399 (source: NCBI BLink). & (gnl|cdd|36921 : 359.0) no description available & (reliability: 1060.0) & (original description: Putative 33022, Description = Predicted protein, PFAM = PF12796)' T '31.1' 'cell.organisation' 'nbv0.3scaffold15480_27556-33321' '(at5g08120 : 155.0) Microtubule-associated and viral movement protein binding protein. Negatively regulates KN1 association to plasmodesmata and, consequently, cell-to-cell transport. Involved in the alignment of cortical microtubules, the patterning of stomata and in restricting tobamoviral infections.; movement protein binding protein 2C (MPB2C); Has 5726 Blast hits to 4344 proteins in 670 species: Archae - 77; Bacteria - 646; Metazoa - 3260; Fungi - 443; Plants - 256; Viruses - 12; Other Eukaryotes - 1032 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative MPB2C, Description = Microtubule-associated protein, PFAM = )' T '31.1' 'cell.organisation' 'nbv0.3scaffold16126_18598-30850' '(at1g13180 : 733.0) Mutant has defect in trichome cell expansion and actin organization resulting in a distorted trichome phenotype.; DISTORTED TRICHOMES 1 (DIS1); FUNCTIONS IN: actin binding, structural constituent of cytoskeleton, ATP binding; INVOLVED IN: actin filament organization, multidimensional cell growth, cell morphogenesis, trichome morphogenesis; LOCATED IN: Arp2/3 protein complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000), Actin-related protein 3 (InterPro:IPR015623); BEST Arabidopsis thaliana protein match is: Actin-like ATPase superfamily protein (TAIR:AT2G42100.1); Has 12406 Blast hits to 12242 proteins in 2483 species: Archae - 6; Bacteria - 5; Metazoa - 5339; Fungi - 3178; Plants - 1454; Viruses - 2; Other Eukaryotes - 2422 (source: NCBI BLink). & (gnl|cdd|35897 : 622.0) no description available & (gnl|cdd|28896 : 416.0) no description available & (p20904|act_volca : 221.0) Actin - Volvox carteri & (reliability: 1466.0) & (original description: Putative ARP3, Description = Actin-related protein 3, PFAM = PF00022)' T '31.1' 'cell.organisation' 'nbv0.3scaffold17139_2677-11095' '(at3g18670 : 123.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G04700.1); Has 4772 Blast hits to 3121 proteins in 218 species: Archae - 7; Bacteria - 222; Metazoa - 2187; Fungi - 197; Plants - 1396; Viruses - 2; Other Eukaryotes - 761 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative glysoja_020149, Description = Ankyrin repeat-containing protein, PFAM = PF12796;PF13962)' T '31.1' 'cell.organisation' 'nbv0.3scaffold18056_1-3159' '(at3g53000 : 211.0) phloem protein 2-A15 (PP2-A15); FUNCTIONS IN: carbohydrate binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 510 Blast hits to 504 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 510; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative P2A12, Description = AtPP2-A12, PFAM = )' T '31.1' 'cell.organisation' 'nbv0.3scaffold18907_27581-32417' '(at5g40160 : 224.0) Encodes ankyrin repeat protein EMB506. Mutations in this locus result in embryo lethality.; embryo defective 506 (EMB506); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat protein (TAIR:AT5G66055.1); Has 90387 Blast hits to 29284 proteins in 1374 species: Archae - 134; Bacteria - 8440; Metazoa - 46466; Fungi - 7182; Plants - 3258; Viruses - 1346; Other Eukaryotes - 23561 (source: NCBI BLink). & (gnl|cdd|29261 : 118.0) no description available & (gnl|cdd|39379 : 90.0) no description available & (reliability: 448.0) & (original description: Putative EMB139, Description = Ankyrin repeat domain-containing protein, PFAM = PF12796;PF12796)' T '31.1' 'cell.organisation' 'nbv0.3scaffold19918_142-13247' '(at1g21730 : 590.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G06670.1); Has 16169 Blast hits to 14119 proteins in 580 species: Archae - 38; Bacteria - 464; Metazoa - 7403; Fungi - 1809; Plants - 2013; Viruses - 19; Other Eukaryotes - 4423 (source: NCBI BLink). & (gnl|cdd|30096 : 252.0) no description available & (gnl|cdd|35463 : 226.0) no description available & (p46869|fla10_chlre : 128.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1180.0) & (original description: Putative KIN7L, Description = Kinesin-like protein KIN-7L, chloroplastic, PFAM = PF00225)' T '31.1' 'cell.organisation' 'nbv0.3scaffold21619_16398-29828' '(at1g63640 : 768.0) P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (TAIR:AT5G41310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35460 : 478.0) no description available & (gnl|cdd|30088 : 412.0) no description available & (p46869|fla10_chlre : 203.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1536.0) & (original description: Putative kch2, Description = Kinesin-like protein, PFAM = PF00307;PF00225)' T '31.1' 'cell.organisation' 'nbv0.3scaffold22975_18217-30424' '(at2g35490 : 317.0) Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: fibrillin (TAIR:AT4G04020.1); Has 422 Blast hits to 421 proteins in 82 species: Archae - 0; Bacteria - 91; Metazoa - 1; Fungi - 0; Plants - 314; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (q9zp40|pg1_pea : 310.0) Plastoglobulin-1, chloroplast precursor - Pisum sativum (Garden pea) & (gnl|cdd|68332 : 187.0) no description available & (reliability: 634.0) & (original description: Putative PAP3, Description = Plastid lipid-associated protein 3, chloroplastic, PFAM = PF04755)' T '31.1' 'cell.organisation' 'nbv0.3scaffold23901_6120-14953' '(at5g40160 : 278.0) Encodes ankyrin repeat protein EMB506. Mutations in this locus result in embryo lethality.; embryo defective 506 (EMB506); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat protein (TAIR:AT5G66055.1); Has 90387 Blast hits to 29284 proteins in 1374 species: Archae - 134; Bacteria - 8440; Metazoa - 46466; Fungi - 7182; Plants - 3258; Viruses - 1346; Other Eukaryotes - 23561 (source: NCBI BLink). & (gnl|cdd|29261 : 120.0) no description available & (gnl|cdd|35729 : 104.0) no description available & (reliability: 556.0) & (original description: Putative EMB506, Description = Ankyrin repeat domain-containing protein EMB506, chloroplastic, PFAM = PF12796)' T '31.1' 'cell.organisation' 'nbv0.3scaffold24401_13457-29508' '(at1g20060 : 339.0) ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G60930.1); Has 10625 Blast hits to 10139 proteins in 419 species: Archae - 2; Bacteria - 255; Metazoa - 4769; Fungi - 1373; Plants - 1690; Viruses - 3; Other Eukaryotes - 2533 (source: NCBI BLink). & (gnl|cdd|30083 : 236.0) no description available & (gnl|cdd|35463 : 197.0) no description available & (reliability: 678.0) & (original description: Putative KIN6, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'nbv0.3scaffold24892_17747-22238' '(at3g18670 : 184.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G04700.1); Has 4772 Blast hits to 3121 proteins in 218 species: Archae - 7; Bacteria - 222; Metazoa - 2187; Fungi - 197; Plants - 1396; Viruses - 2; Other Eukaryotes - 761 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative At5g35810, Description = Ankyrin repeat family protein, PFAM = PF13962)' T '31.1' 'cell.organisation' 'nbv0.3scaffold25102_11549-24490' '(at5g07740 : 676.0) actin binding; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; EXPRESSED IN: shoot apex, stem; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Tensin phosphatase, C2 domain (InterPro:IPR014020), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 protein (TAIR:AT5G07770.1). & (gnl|cdd|85898 : 385.0) no description available & (gnl|cdd|37135 : 300.0) no description available & (reliability: 1352.0) & (original description: Putative FH19, Description = Formin-like protein 19, PFAM = PF10409;PF02181)' T '31.1' 'cell.organisation' 'nbv0.3scaffold25655_7780-16943' '(at5g12320 : 167.0) ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G19150.1); Has 86458 Blast hits to 28632 proteins in 1360 species: Archae - 129; Bacteria - 7616; Metazoa - 44184; Fungi - 6856; Plants - 3179; Viruses - 915; Other Eukaryotes - 23579 (source: NCBI BLink). & (gnl|cdd|29261 : 104.0) no description available & (gnl|cdd|35728 : 87.0) no description available & (reliability: 334.0) & (original description: Putative BcARP, Description = Ankyrin repeats protein, PFAM = PF13857)' T '31.1' 'cell.organisation' 'nbv0.3scaffold26327_862-7726' '(at5g53400 : 242.0) Encodes BOBBER1 (BOB1), a non-canonical small heat shock protein required for both development and thermotolerance. BOB1 is cytoplasmic at basal temperatures but forms heat shock granules containing canonical small heat shock proteins at high temperatures.; BOBBER1 (BOB1); CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT4G27890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37476 : 197.0) no description available & (reliability: 484.0) & (original description: Putative BOB1, Description = Protein BOBBER 1, PFAM = PF04969)' T '31.1' 'cell.organisation' 'nbv0.3scaffold27405_13360-21081' '(at4g35450 : 370.0) Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.; ankyrin repeat-containing protein 2 (AKR2); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1). & (gnl|cdd|29261 : 120.0) no description available & (gnl|cdd|39379 : 85.8) no description available & (reliability: 740.0) & (original description: Putative AKR2B, Description = Ankyrin repeat domain-containing protein 2B, PFAM = PF12796)' T '31.1' 'cell.organisation' 'nbv0.3scaffold28253_9986-14346' '(at3g01750 : 456.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G04140.1); Has 30372 Blast hits to 15038 proteins in 745 species: Archae - 53; Bacteria - 2422; Metazoa - 15116; Fungi - 2165; Plants - 2906; Viruses - 97; Other Eukaryotes - 7613 (source: NCBI BLink). & (gnl|cdd|29261 : 89.8) no description available & (gnl|cdd|35729 : 84.7) no description available & (reliability: 912.0) & (original description: Putative pco067020, Description = E3 ubiquitin-protein ligase mib1, PFAM = PF12796)' T '31.1' 'cell.organisation' 'nbv0.3scaffold28582_698-8339' '(at5g35700 : 976.0) fimbrin-like protein 2 (FIM2); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actinin-type, actin-binding, conserved site (InterPro:IPR001589), Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715); BEST Arabidopsis thaliana protein match is: Actin binding Calponin homology (CH) domain-containing protein (TAIR:AT2G04750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35269 : 913.0) no description available & (gnl|cdd|34673 : 239.0) no description available & (reliability: 1952.0) & (original description: Putative FIM5, Description = Fimbrin-5, PFAM = PF00307;PF00307;PF00307;PF00307)' T '31.1' 'cell.organisation' 'nbv0.3scaffold29216_11436-17431' '(at1g04780 : 769.0) Ankyrin repeat family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Protein of unknown function DUF3424 (InterPro:IPR021832), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G24210.1); Has 1138 Blast hits to 827 proteins in 107 species: Archae - 2; Bacteria - 12; Metazoa - 639; Fungi - 18; Plants - 352; Viruses - 2; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|35742 : 322.0) no description available & (reliability: 1538.0) & (original description: Putative At1g04780, Description = Ankyrin repeat-containing protein, PFAM = PF11904)' T '31.1' 'cell.organisation' 'nbv0.3scaffold31476_11083-23691' '(at5g60930 : 1119.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G47820.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35465 : 598.0) no description available & (gnl|cdd|30094 : 483.0) no description available & (p46869|fla10_chlre : 253.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2238.0) & (original description: Putative KIN4C, Description = Kinesin-like protein KIN-4C, PFAM = PF00225)' T '31.1' 'cell.organisation' 'nbv0.3scaffold32310_6851-15551' '(at4g19410 : 151.0) Pectinacetylesterase family protein; FUNCTIONS IN: actin binding, carboxylesterase activity; INVOLVED IN: cytoskeleton organization; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963), Profilin/allergen (InterPro:IPR002097); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G45280.2). & (reliability: 300.0) & (original description: Putative F383_20995, Description = Putative heat shock factor, PFAM = PF00235)' T '31.1' 'cell.organisation' 'nbv0.3scaffold34061_17354-22614' '(at3g24530 : 691.0) AAA-type ATPase family protein / ankyrin repeat family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Ankyrin repeat-containing domain (InterPro:IPR020683), CbxX/CfqX (InterPro:IPR000641), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 1 in Arabidopsis thaliana (TAIR:AT2G28840.1); Has 62125 Blast hits to 27268 proteins in 1602 species: Archae - 369; Bacteria - 7189; Metazoa - 29752; Fungi - 5124; Plants - 2920; Viruses - 566; Other Eukaryotes - 16205 (source: NCBI BLink). & (gnl|cdd|35949 : 172.0) no description available & (gnl|cdd|29261 : 85.9) no description available & (reliability: 1382.0) & (original description: Putative v1g62711, Description = Predicted protein, PFAM = PF00004;PF12796)' T '31.1' 'cell.organisation' 'nbv0.3scaffold37173_1-20284' '(at5g18410 : 1231.0) distorted trichomes and exhibits a diffuse actin cytoskeleton; PIROGI 121 (PIR121); FUNCTIONS IN: transcription activator activity; INVOLVED IN: actin nucleation, trichome morphogenesis, actin cytoskeleton organization; LOCATED IN: SCAR complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytoplasmic FMR1-interacting (InterPro:IPR008081); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38742 : 366.0) no description available & (gnl|cdd|69514 : 363.0) no description available & (reliability: 2462.0) & (original description: Putative KLK, Description = Protein PIR, PFAM = PF05994;PF05994;PF07159)' T '31.1' 'cell.organisation' 'nbv0.3scaffold38168_6821-14446' '(at4g21270 : 843.0) Encodes a kinesin-like motor protein heavy chain. Loss of function mutations have reduced fertility and are defective in spindle formation in male meiosis.; kinesin 1 (ATK1); CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 5 (TAIR:AT4G05190.1); Has 113981 Blast hits to 63024 proteins in 3025 species: Archae - 1256; Bacteria - 16796; Metazoa - 54341; Fungi - 9779; Plants - 6646; Viruses - 430; Other Eukaryotes - 24733 (source: NCBI BLink). & (gnl|cdd|35460 : 503.0) no description available & (gnl|cdd|30088 : 483.0) no description available & (p46870|klp1_chlre : 205.0) Kinesin-like protein KLP1 - Chlamydomonas reinhardtii & (reliability: 1686.0) & (original description: Putative ATK1, Description = Kinesin-1, PFAM = PF00225)' T '31.1' 'cell.organisation' 'nbv0.3scaffold39792_10704-17957' '(at3g53000 : 441.0) phloem protein 2-A15 (PP2-A15); FUNCTIONS IN: carbohydrate binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 510 Blast hits to 504 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 510; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 882.0) & (original description: Putative PP2A15, Description = F-box protein PP2-A15, PFAM = PF14299)' T '31.1' 'cell.organisation' 'nbv0.3scaffold40393_1-7047' '(at5g23910 : 322.0) ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT5G02370.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30098 : 214.0) no description available & (gnl|cdd|35463 : 183.0) no description available & (o23826|k125_tobac : 107.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 644.0) & (original description: Putative PGSC0003DMG400015789, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'nbv0.3scaffold40659_5048-14496' '(at3g45850 : 894.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28620.1). & (gnl|cdd|35464 : 732.0) no description available & (o23826|k125_tobac : 622.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (gnl|cdd|30086 : 474.0) no description available & (reliability: 1788.0) & (original description: Putative cos2, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'nbv0.3scaffold41660_6267-18644' '(at2g30910 : 577.0) actin-related protein C1A (ARPC1A); FUNCTIONS IN: actin binding, nucleotide binding; INVOLVED IN: actin filament organization; LOCATED IN: Arp2/3 protein complex, nucleus, cytoplasm; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), Actin-related protein 2/3 complex, subunit 1 (InterPro:IPR017383), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: actin-related protein C1B (TAIR:AT2G31300.1). & (gnl|cdd|36736 : 428.0) no description available & (reliability: 1154.0) & (original description: Putative ARPC1A, Description = Actin-related protein 2/3 complex subunit 1A, PFAM = PF00400;PF12894)' T '31.1' 'cell.organisation' 'nbv0.3scaffold41988_12924-18342' '(gnl|cdd|36037 : 164.0) no description available & (at5g12380 : 93.2) annexin 8 (ANNAT8); FUNCTIONS IN: calcium-dependent phospholipid binding, calcium ion binding; INVOLVED IN: response to water deprivation, response to salt stress, response to cold, response to heat; EXPRESSED IN: embryo, pedicel, synergid; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464), Annexin, type plant (InterPro:IPR009118); BEST Arabidopsis thaliana protein match is: annexin 7 (TAIR:AT5G10230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative ANN14, Description = Annexin 14, PFAM = PF00191;PF00191;PF00191)' T '31.1' 'cell.organisation' 'nbv0.3scaffold42425_13036-16889' '(at3g18950 : 497.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G49450.1); Has 30107 Blast hits to 16274 proteins in 601 species: Archae - 20; Bacteria - 4381; Metazoa - 11289; Fungi - 6965; Plants - 3765; Viruses - 0; Other Eukaryotes - 3687 (source: NCBI BLink). & (gnl|cdd|29257 : 139.0) no description available & (gnl|cdd|35495 : 84.7) no description available & (reliability: 912.0) & (original description: Putative wdrp, Description = F-box and wd40 domain protein, putative, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '31.1' 'cell.organisation' 'nbv0.3scaffold42531_5386-16090' '(at3g10310 : 758.0) P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 4 (TAIR:AT5G27000.1); Has 11194 Blast hits to 10379 proteins in 346 species: Archae - 2; Bacteria - 8; Metazoa - 5167; Fungi - 1411; Plants - 1943; Viruses - 0; Other Eukaryotes - 2663 (source: NCBI BLink). & (gnl|cdd|35460 : 447.0) no description available & (gnl|cdd|30088 : 413.0) no description available & (p46870|klp1_chlre : 190.0) Kinesin-like protein KLP1 - Chlamydomonas reinhardtii & (reliability: 1516.0) & (original description: Putative kch2, Description = Kinesin-like protein, PFAM = PF00307;PF00225)' T '31.1' 'cell.organisation' 'nbv0.3scaffold45102_6046-14862' '(at5g48460 : 1013.0) Actin binding Calponin homology (CH) domain-containing protein; FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actinin-type, actin-binding, conserved site (InterPro:IPR001589), Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715); BEST Arabidopsis thaliana protein match is: fimbrin-like protein 2 (TAIR:AT5G35700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35269 : 878.0) no description available & (gnl|cdd|34673 : 231.0) no description available & (reliability: 2026.0) & (original description: Putative FIM2, Description = Fimbrin-2, PFAM = PF00307;PF00307;PF00307;PF00307)' T '31.1' 'cell.organisation' 'nbv0.3scaffold46378_6392-10449' '(at1g25280 : 593.0) Member of TLP family; tubby like protein 10 (TLP10); FUNCTIONS IN: phosphoric diester hydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 5 (TAIR:AT1G43640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37713 : 444.0) no description available & (gnl|cdd|85281 : 342.0) no description available & (reliability: 1186.0) & (original description: Putative TULP14, Description = Tubby-like F-box protein 14, PFAM = PF01167;PF00646)' T '31.1' 'cell.organisation' 'nbv0.3scaffold48122_210-6804' '(at1g18370 : 1302.0) Encodes a kinesin HINKEL. Required for cytokinesis in pollen. Mutant has cytokinesis defects; seedling lethal.; HINKEL (HIK); FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: response to cyclopentenone, cellularization of the embryo sac, gametophyte development, pollen development, cytokinesis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT3G43210.1); Has 14045 Blast hits to 12964 proteins in 525 species: Archae - 35; Bacteria - 375; Metazoa - 6535; Fungi - 1633; Plants - 1984; Viruses - 5; Other Eukaryotes - 3478 (source: NCBI BLink). & (gnl|cdd|35463 : 470.0) no description available & (gnl|cdd|30096 : 417.0) no description available & (p46869|fla10_chlre : 216.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2604.0) & (original description: Putative NACK1, Description = Kinesin-like protein NACK1, PFAM = PF00225;PF11995)' T '31.1' 'cell.organisation' 'nbv0.3scaffold49197_5509-8579' '(at2g21950 : 371.0) Encodes an SKP1 interacting partner (SKIP6).; SKP1 interacting partner 6 (SKIP6); CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT4G39550.1); Has 5633 Blast hits to 4259 proteins in 231 species: Archae - 10; Bacteria - 283; Metazoa - 3617; Fungi - 16; Plants - 1462; Viruses - 63; Other Eukaryotes - 182 (source: NCBI BLink). & (gnl|cdd|39642 : 108.0) no description available & (reliability: 742.0) & (original description: Putative SKIP6, Description = F-box/kelch-repeat protein SKIP6, PFAM = PF01344;PF01344;PF00646)' T '31.1' 'cell.organisation' 'nbv0.3scaffold49710_1670-14794' '(at4g18950 : 570.0) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Integrin-linked protein kinase (InterPro:IPR016253), Ankyrin repeat-containing domain (InterPro:IPR020683), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G58760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 232.0) no description available & (gnl|cdd|87344 : 189.0) no description available & (q6x4a2|cipk1_orysa : 106.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1140.0) & (original description: Putative APK1, Description = Ankyrin-kinase protein, PFAM = PF07714;PF12796)' T '31.1' 'cell.organisation' 'nbv0.3scaffold50162_7036-14335' '(at2g21300 : 885.0) ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT4G38950.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35463 : 460.0) no description available & (gnl|cdd|30096 : 405.0) no description available & (p46869|fla10_chlre : 223.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1770.0) & (original description: Putative KIN7E, Description = Kinesin-like protein KIN-7E, PFAM = PF11995;PF00225)' T '31.1' 'cell.organisation' 'nbv0.3scaffold53877_2477-12683' '(at3g18670 : 274.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G04700.1); Has 4772 Blast hits to 3121 proteins in 218 species: Archae - 7; Bacteria - 222; Metazoa - 2187; Fungi - 197; Plants - 1396; Viruses - 2; Other Eukaryotes - 761 (source: NCBI BLink). & (reliability: 548.0) & (original description: Putative At5g35810, Description = Ankyrin repeat family protein, PFAM = PF13962)' T '31.1' 'cell.organisation' 'nbv0.3scaffold61404_324-5526' '(at2g38750 : 275.0) Annexins are a family of calcium dependent membrane binding proteins though to be involved in Golgi mediated secretion. This is one of four annexins identified in Arabidopsis.; annexin 4 (ANNAT4); FUNCTIONS IN: calcium-dependent phospholipid binding, calcium ion binding; INVOLVED IN: in 6 processes; LOCATED IN: cell surface; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin (InterPro:IPR001464); BEST Arabidopsis thaliana protein match is: annexin 8 (TAIR:AT5G12380.1); Has 2371 Blast hits to 2094 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 1728; Fungi - 90; Plants - 415; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|36037 : 218.0) no description available & (p51074|anx4_fraan : 171.0) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (reliability: 550.0) & (original description: Putative ANN4, Description = Annexin D4, PFAM = PF00191;PF00191;PF00191)' T '31.1' 'cell.organisation' 'nbv0.3scaffold61438_2764-5232' '(p80471|lipc_soltu : 179.0) Light-induced protein, chloroplast precursor (Chloroplastic drought-induced stress protein CDSP-34) - Solanum tuberosum (Potato) & (at4g22240 : 158.0) Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: fruit, guard cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: fibrillin (TAIR:AT4G04020.1); Has 461 Blast hits to 460 proteins in 78 species: Archae - 0; Bacteria - 75; Metazoa - 0; Fungi - 0; Plants - 360; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|68332 : 100.0) no description available & (reliability: 316.0) & (original description: Putative CHRC, Description = Probable plastid-lipid-associated protein 2, chloroplastic, PFAM = PF04755)' T '31.1' 'cell.organisation' 'nbv0.3scaffold66651_1-6503' '(at3g57890 : 393.0) Tubulin binding cofactor C domain-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CARP motif (InterPro:IPR006599), C-CAP/cofactor C-like domain (InterPro:IPR017901), Tubulin binding cofactor C (InterPro:IPR012945); BEST Arabidopsis thaliana protein match is: C-CAP/cofactor C-like domain-containing protein (TAIR:AT2G42230.2). & (gnl|cdd|39617 : 261.0) no description available & (reliability: 752.0) & (original description: Putative TBCC, Description = TBCC domain-containing protein 1, PFAM = )' T '31.1' 'cell.organisation' 'nbv0.3scaffold69895_448-6686' '(at5g20350 : 660.0) Encodes a protein containing ankyrin and DHHC-CRD domain. Acts to restrict the size of the swelling that forms at the beginning of root hair cell growth, possibly by a mechanism that requires RHD1. Mutant displays defects in both root hair and pollen tube growth.; TIP GROWTH DEFECTIVE 1 (TIP1); FUNCTIONS IN: acyl binding, S-acyltransferase activity; INVOLVED IN: response to salt stress, cell tip growth; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein with DHHC zinc finger domain (TAIR:AT2G14255.1); Has 74376 Blast hits to 32836 proteins in 1312 species: Archae - 100; Bacteria - 6632; Metazoa - 35576; Fungi - 7192; Plants - 4422; Viruses - 788; Other Eukaryotes - 19666 (source: NCBI BLink). & (gnl|cdd|35729 : 231.0) no description available & (gnl|cdd|34870 : 127.0) no description available & (reliability: 1320.0) & (original description: Putative kiaa0946, Description = S-acyltransferase, PFAM = PF01529;PF12796)' T '31.1' 'cell.organisation' 'nbv0.3scaffold75398_1-7940' '(at2g47500 : 689.0) P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 4 (TAIR:AT5G27000.1); Has 11938 Blast hits to 11443 proteins in 432 species: Archae - 0; Bacteria - 1; Metazoa - 5987; Fungi - 1397; Plants - 1883; Viruses - 0; Other Eukaryotes - 2670 (source: NCBI BLink). & (gnl|cdd|35460 : 267.0) no description available & (gnl|cdd|30088 : 252.0) no description available & (o23826|k125_tobac : 108.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 1378.0) & (original description: Putative kch2, Description = Kinesin-like protein, PFAM = PF00225;PF00307)' T '31.1' 'cell.organisation' 'nbv0.3scaffold85302_298-3823' '(gnl|cdd|38640 : 99.2) no description available & (at5g20110 : 92.4) Dynein light chain type 1 family protein; FUNCTIONS IN: microtubule motor activity; INVOLVED IN: microtubule-based process; LOCATED IN: microtubule associated complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Dynein light chain, type 1/2 (InterPro:IPR001372); BEST Arabidopsis thaliana protein match is: Dynein light chain type 1 family protein (TAIR:AT1G23220.1); Has 1201 Blast hits to 1201 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 594; Fungi - 104; Plants - 259; Viruses - 0; Other Eukaryotes - 244 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative vfPIP, Description = Dynein light chain type 1 family protein, PFAM = PF01221)' T '31.1' 'cell.organisation' 'nbv0.3scaffold88736_3749-5638' '(at5g43070 : 95.9) WPP family members contains an NE targeting domain. This domain, called the WPP domain after a highly conserved Trp-Pro-Pro motif, is necessary and sufficient for NE targeting of WPP1. RNAi suppression of WPP1 resulted in reduced mitotic activity.; WPP domain protein 1 (WPP1); BEST Arabidopsis thaliana protein match is: WPP domain protein 2 (TAIR:AT1G47200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative MAF1, Description = MFP1 attachment factor 1, PFAM = PF13943)' T '31.1' 'cell.organisation' 'nbv0.3scaffold90787_2538-5311' '(at3g50390 : 252.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G26490.1); Has 33178 Blast hits to 17374 proteins in 678 species: Archae - 38; Bacteria - 5184; Metazoa - 12049; Fungi - 7688; Plants - 3936; Viruses - 0; Other Eukaryotes - 4283 (source: NCBI BLink). & (gnl|cdd|29257 : 139.0) no description available & (gnl|cdd|35495 : 85.5) no description available & (reliability: 504.0) & (original description: Putative At3g50390, Description = F-box and wd40 domain protein, putative, PFAM = PF00400;PF00400;PF00400)' T '31.1' 'cell.organisation' 'nbv0.3scaffold99350_1427-4124' '(at5g15500 : 223.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G10720.1); Has 18283 Blast hits to 10029 proteins in 436 species: Archae - 21; Bacteria - 1142; Metazoa - 9586; Fungi - 1012; Plants - 1920; Viruses - 51; Other Eukaryotes - 4551 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative BnaC03g14470D, Description = BnaC03g14470D protein, PFAM = PF13962;PF12796;PF13857)' T '31.1' 'cell.organisation' 'nbv0.3scaffold111236_1011-2835' '(at2g04740 : 229.0) ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Ankyrin repeat-containing domain (InterPro:IPR020683), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35731 : 191.0) no description available & (reliability: 458.0) & (original description: Putative abtb1, Description = BTB/POZ domain-containing protein At2g04740, PFAM = PF13637)' T '31.1' 'cell.organisation' 'nbv0.5scaffold5_1313729-1319532' '(at1g80350 : 639.0) encodes a p60 katanin protein that is expressed throughout the plant. Required for the specification of cell fates from early in development (in the meristem) through differentiation and for normal postmitotic organization of cortical microtubules into transverse arrays in root epidermis cells. Mutants display cytoskeletal defects.; ECTOPIC ROOT HAIR 3 (ERH3); FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: trichome branching, cortical microtubule organization, multidimensional cell growth, plant-type cell wall biogenesis, microtubule cytoskeleton organization; LOCATED IN: katanin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Vps4 oligomerisation, C-terminal (InterPro:IPR015415); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G34560.1); Has 31677 Blast hits to 29370 proteins in 3124 species: Archae - 1478; Bacteria - 12054; Metazoa - 4742; Fungi - 3292; Plants - 2928; Viruses - 23; Other Eukaryotes - 7160 (source: NCBI BLink). & (gnl|cdd|35957 : 490.0) no description available & (gnl|cdd|30812 : 192.0) no description available & (p54774|cdc48_soybn : 150.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 1278.0) & (original description: Putative AAA1, Description = Katanin p60 ATPase-containing subunit A1, PFAM = PF00004)' T '31.1' 'cell.organisation' 'nbv0.5scaffold184_757612-821087' '(at3g10180 : 1024.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G59540.1); Has 155291 Blast hits to 84008 proteins in 3275 species: Archae - 1854; Bacteria - 27736; Metazoa - 67441; Fungi - 13681; Plants - 10077; Viruses - 530; Other Eukaryotes - 33972 (source: NCBI BLink). & (gnl|cdd|30096 : 424.0) no description available & (gnl|cdd|35463 : 383.0) no description available & (p46869|fla10_chlre : 231.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2048.0) & (original description: Putative KIN7O, Description = Kinesin-like protein KIN-7O, PFAM = PF00225)' T '31.1' 'cell.organisation' 'nbv0.5scaffold203_120709-134671' '(at3g18670 : 221.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G04700.1); Has 4772 Blast hits to 3121 proteins in 218 species: Archae - 7; Bacteria - 222; Metazoa - 2187; Fungi - 197; Plants - 1396; Viruses - 2; Other Eukaryotes - 761 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative TCM_037539, Description = Ankyrin repeat-containing-like protein, PFAM = PF13962;PF12796)' T '31.1' 'cell.organisation' 'nbv0.5scaffold253_469232-474003' '(at1g42550 : 718.0) Encodes a plant-specific protein of unknown function that appears to be conserved among angiosperms.; PLASTID MOVEMENT IMPAIRED1 (PMI1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chloroplast relocation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G20610.1); Has 1448 Blast hits to 1079 proteins in 174 species: Archae - 4; Bacteria - 103; Metazoa - 395; Fungi - 128; Plants - 164; Viruses - 85; Other Eukaryotes - 569 (source: NCBI BLink). & (reliability: 1436.0) & (original description: Putative PMI1, Description = Protein PLASTID MOVEMENT IMPAIRED 1, PFAM = PF10358)' T '31.1' 'cell.organisation' 'nbv0.5scaffold270_612362-620488' '(at2g47500 : 800.0) P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 4 (TAIR:AT5G27000.1); Has 11938 Blast hits to 11443 proteins in 432 species: Archae - 0; Bacteria - 1; Metazoa - 5987; Fungi - 1397; Plants - 1883; Viruses - 0; Other Eukaryotes - 2670 (source: NCBI BLink). & (gnl|cdd|35460 : 286.0) no description available & (gnl|cdd|30088 : 266.0) no description available & (o23826|k125_tobac : 112.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 1600.0) & (original description: Putative kch2, Description = Kinesin-related protein, PFAM = PF00307;PF00225)' T '31.1' 'cell.organisation' 'nbv0.5scaffold277_122669-300948' '(at3g17360 : 693.0) PHRAGMOPLAST ORIENTING KINESIN 1 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK1 constructs were more limited than those for POK2; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls.; phragmoplast orienting kinesin 1 (POK1); FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: cytokinesis; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast orienting kinesin 2 (TAIR:AT3G19050.1); Has 97051 Blast hits to 52483 proteins in 2606 species: Archae - 1597; Bacteria - 13842; Metazoa - 45578; Fungi - 8395; Plants - 6409; Viruses - 244; Other Eukaryotes - 20986 (source: NCBI BLink). & (gnl|cdd|30095 : 502.0) no description available & (gnl|cdd|39481 : 382.0) no description available & (p46869|fla10_chlre : 263.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1386.0) & (original description: Putative kif15, Description = Kinesin-like protein KIF15, PFAM = PF00225)' T '31.1' 'cell.organisation' 'nbv0.5scaffold314_105608-111292' '(gnl|cdd|72813 : 246.0) no description available & (at1g21810 : 241.0) Plant protein of unknown function (DUF869); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G77580.1); Has 79141 Blast hits to 43153 proteins in 2526 species: Archae - 1269; Bacteria - 11097; Metazoa - 38829; Fungi - 6739; Plants - 4917; Viruses - 325; Other Eukaryotes - 15965 (source: NCBI BLink). & (reliability: 444.0) & (original description: Putative FPP, Description = Filament-like plant protein, PFAM = PF05911;PF05911;PF05911;PF05911)' T '31.1' 'cell.organisation' 'nbv0.5scaffold354_347735-374354' '(at2g35490 : 315.0) Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: fibrillin (TAIR:AT4G04020.1); Has 422 Blast hits to 421 proteins in 82 species: Archae - 0; Bacteria - 91; Metazoa - 1; Fungi - 0; Plants - 314; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (q9zp40|pg1_pea : 310.0) Plastoglobulin-1, chloroplast precursor - Pisum sativum (Garden pea) & (gnl|cdd|68332 : 193.0) no description available & (reliability: 630.0) & (original description: Putative PAP3, Description = Plastid lipid-associated protein 3, chloroplastic, PFAM = PF04755)' T '31.1' 'cell.organisation' 'nbv0.5scaffold457_680322-710861' '(gnl|cdd|36867 : 113.0) no description available & (gnl|cdd|79982 : 113.0) no description available & (at1g62040 : 103.0) autophagy 8c (ATG8C); FUNCTIONS IN: microtubule binding; INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G21980.2). & (reliability: 204.0) & (original description: Putative atg8, Description = Autophagy-related protein, PFAM = PF02991)' T '31.1' 'cell.organisation' 'nbv0.5scaffold488_36930-63806' '(at1g30825 : 421.0) Involved in trichome maturation. mutant displays enlarged trichomes; DISTORTED TRICHOMES 2 (DIS2); CONTAINS InterPro DOMAIN/s: Arp2/3 complex, 34kDa subunit p34-Arc (InterPro:IPR007188); BEST Arabidopsis thaliana protein match is: actin-related protein C2B (TAIR:AT2G33385.2); Has 407 Blast hits to 407 proteins in 172 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 133; Plants - 82; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|38037 : 177.0) no description available & (gnl|cdd|67653 : 161.0) no description available & (reliability: 842.0) & (original description: Putative ARPC2A, Description = Actin-related protein 2/3 complex subunit 2A, PFAM = PF04045)' T '31.1' 'cell.organisation' 'nbv0.5scaffold503_463624-467394' '(at1g47270 : 438.0) Member of TLP family; tubby like protein 6 (TLP6); FUNCTIONS IN: phosphoric diester hydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 2 (TAIR:AT2G18280.2). & (gnl|cdd|37713 : 376.0) no description available & (gnl|cdd|85281 : 267.0) no description available & (reliability: 798.0) & (original description: Putative TULP6, Description = Tubby-like F-box protein 6, PFAM = PF00646;PF01167)' T '31.1' 'cell.organisation' 'nbv0.5scaffold515_694386-716463' '(at1g55550 : 488.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: mitochondrion; EXPRESSED IN: seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G27950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30088 : 406.0) no description available & (gnl|cdd|35460 : 343.0) no description available & (o23826|k125_tobac : 159.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 976.0) & (original description: Putative kifc1, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'nbv0.5scaffold525_604591-613550' '(gnl|cdd|35269 : 941.0) no description available & (at4g26700 : 939.0) fimbrin-like protein; fimbrin 1 (FIM1); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actinin-type, actin-binding, conserved site (InterPro:IPR001589), Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715); BEST Arabidopsis thaliana protein match is: Actin binding Calponin homology (CH) domain-containing protein (TAIR:AT5G55400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34673 : 228.0) no description available & (reliability: 1878.0) & (original description: Putative FIM5, Description = Fimbrin-5, PFAM = PF00307;PF00307;PF00307;PF00307)' T '31.1' 'cell.organisation' 'nbv0.5scaffold590_63445-68579' '(at1g52080 : 260.0) unknown function; AR791; FUNCTIONS IN: actin binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Hydroxyproline-rich glycoprotein family protein (TAIR:AT3G25690.2); Has 24282 Blast hits to 16377 proteins in 1084 species: Archae - 431; Bacteria - 1887; Metazoa - 12444; Fungi - 1813; Plants - 1044; Viruses - 150; Other Eukaryotes - 6513 (source: NCBI BLink). & (reliability: 520.0) & (original description: Putative AR791, Description = Actin binding family protein, putative isoform 2, PFAM = )' T '31.1' 'cell.organisation' 'nbv0.5scaffold931_378215-384617' '(at4g14330 : 699.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: phragmoplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 1 (TAIR:AT4G21270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35464 : 348.0) no description available & (gnl|cdd|47468 : 259.0) no description available & (o23826|k125_tobac : 124.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 1398.0) & (original description: Putative PAKRP2, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'nbv0.5scaffold1020_356875-365827' '(at3g60830 : 592.0) Encodes an actin-related protein required for normal embryogenesis, plant architecture and floral organ abscission.; actin-related protein 7 (ARP7); CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 12219 Blast hits to 11995 proteins in 2504 species: Archae - 0; Bacteria - 50; Metazoa - 5224; Fungi - 3189; Plants - 1407; Viruses - 2; Other Eukaryotes - 2347 (source: NCBI BLink). & (gnl|cdd|35895 : 306.0) no description available & (gnl|cdd|28896 : 269.0) no description available & (p30173|act13_soltu : 231.0) Actin-101 - Solanum tuberosum (Potato) & (reliability: 1184.0) & (original description: Putative ARP7, Description = Actin-related protein 7, PFAM = PF00022;PF00022)' T '31.1' 'cell.organisation' 'nbv0.5scaffold1022_482511-488270' '(at3g12360 : 747.0) Encodes a protein with an ankyrin motif and transmembrane domains that is involved in salt tolerance. Expressed throughout the plant and localized to the plasma membrane. Loss of function mutations show an increased tolerance to salt based on assaying seedling growth in the presence of salt. In the mutants, induction of genes required for production of reactive oxygen species is reduced suggesting that itn1 promotes ROS production.; INCREASED TOLERANCE TO NACL (ITN1); INVOLVED IN: response to salt stress; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G09550.1); Has 61607 Blast hits to 26705 proteins in 1191 species: Archae - 49; Bacteria - 5778; Metazoa - 28187; Fungi - 6605; Plants - 4929; Viruses - 594; Other Eukaryotes - 15465 (source: NCBI BLink). & (gnl|cdd|35729 : 112.0) no description available & (gnl|cdd|29261 : 93.2) no description available & (reliability: 1356.0) & (original description: Putative At3g12360, Description = Ankyrin repeat-containing protein At3g12360, PFAM = PF13962;PF12796;PF12796;PF00023)' T '31.1' 'cell.organisation' 'nbv0.5scaffold1097_61078-73996' '(at5g60930 : 1096.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G47820.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35465 : 609.0) no description available & (gnl|cdd|30094 : 484.0) no description available & (p46869|fla10_chlre : 251.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2192.0) & (original description: Putative KIN4C, Description = Kinesin-like protein KIN-4C, PFAM = PF00225)' T '31.1' 'cell.organisation' 'nbv0.5scaffold1141_481645-492070' '(at2g02240 : 265.0) maternal effect embryo arrest 66 (MEE66); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B2 (TAIR:AT2G02250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 530.0) & (original description: Putative At2g02240, Description = F-box protein At2g02240, PFAM = PF14299)' T '31.1' 'cell.organisation' 'nbv0.5scaffold1169_397964-403713' '(at5g08120 : 172.0) Microtubule-associated and viral movement protein binding protein. Negatively regulates KN1 association to plasmodesmata and, consequently, cell-to-cell transport. Involved in the alignment of cortical microtubules, the patterning of stomata and in restricting tobamoviral infections.; movement protein binding protein 2C (MPB2C); Has 5726 Blast hits to 4344 proteins in 670 species: Archae - 77; Bacteria - 646; Metazoa - 3260; Fungi - 443; Plants - 256; Viruses - 12; Other Eukaryotes - 1032 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative MPB2C, Description = Microtubule-associated protein, PFAM = )' T '31.1' 'cell.organisation' 'nbv0.5scaffold1199_201914-216933' '(at4g18950 : 228.0) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Integrin-linked protein kinase (InterPro:IPR016253), Ankyrin repeat-containing domain (InterPro:IPR020683), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G58760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 134.0) no description available & (gnl|cdd|87344 : 114.0) no description available & (reliability: 456.0) & (original description: Putative PGSC0003DMG401030595, Description = Integrin-linked protein kinase family, PFAM = PF13857;PF07714)' T '31.1' 'cell.organisation' 'nbv0.5scaffold1212_105964-109034' '(at2g21950 : 315.0) Encodes an SKP1 interacting partner (SKIP6).; SKP1 interacting partner 6 (SKIP6); CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT4G39550.1); Has 5633 Blast hits to 4259 proteins in 231 species: Archae - 10; Bacteria - 283; Metazoa - 3617; Fungi - 16; Plants - 1462; Viruses - 63; Other Eukaryotes - 182 (source: NCBI BLink). & (gnl|cdd|39642 : 103.0) no description available & (reliability: 630.0) & (original description: Putative SKIP6, Description = F-box/kelch-repeat protein SKIP6, PFAM = PF01344;PF01344;PF00646)' T '31.1' 'cell.organisation' 'nbv0.5scaffold1229_407739-415162' '(at3g63480 : 524.0) ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast-associated kinesin-related protein 1 (TAIR:AT4G14150.1); Has 10148 Blast hits to 9733 proteins in 305 species: Archae - 0; Bacteria - 0; Metazoa - 4474; Fungi - 1347; Plants - 1834; Viruses - 0; Other Eukaryotes - 2493 (source: NCBI BLink). & (gnl|cdd|30091 : 408.0) no description available & (gnl|cdd|35461 : 348.0) no description available & (p46869|fla10_chlre : 203.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1048.0) & (original description: Putative KIN1, Description = Kinesin-like protein KIN-1, PFAM = PF00225)' T '31.1' 'cell.organisation' 'nbv0.5scaffold1322_314071-322962' '(at1g18450 : 359.0) Encodes a gene similar to actin-related proteins in other organisms. Member of nuclear ARP family of genes. Component of chromatin remodeling complexes, involved in chromatin-mediated gene regulation. Phenotype of the arp4-1 mutant allele revealed partial sterility due to defects in anther development. Targeting the distinct, 3' UTR of AtARP4 transcripts with RNA interference caused a drastic reduction in the level of AtARP4 protein expression, and resulted in strong pleiotropic phenotypes such as altered organization of plant organs, early flowering, delayed flower senescence and high levels of sterility. Western blot analysis and immunolabelling demonstrated a clear correlation between reductions in the level of AtARP4 expression and severity of the phenotypes.; actin-related protein 4 (ARP4); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: long-day photoperiodism, flowering, chromatin organization, pollen sperm cell differentiation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: actin-11 (TAIR:AT3G12110.1); Has 13669 Blast hits to 13362 proteins in 2792 species: Archae - 2; Bacteria - 480; Metazoa - 5593; Fungi - 3430; Plants - 1457; Viruses - 2; Other Eukaryotes - 2705 (source: NCBI BLink). & (gnl|cdd|35898 : 263.0) no description available & (gnl|cdd|84448 : 227.0) no description available & (p30167|act3_soltu : 144.0) Actin-58 - Solanum tuberosum (Potato) & (reliability: 718.0) & (original description: Putative arpD, Description = Actin-related protein 4, PFAM = PF00022)' T '31.1' 'cell.organisation' 'nbv0.5scaffold1328_330226-341009' '(at3g16630 : 996.0) Kinesin-13A localized to entire Golgi stacks. Involved in trichome development.; KINESIN-13A; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: trichome morphogenesis; LOCATED IN: Golgi stack, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT3G16060.1); Has 9814 Blast hits to 9502 proteins in 306 species: Archae - 4; Bacteria - 2; Metazoa - 4282; Fungi - 1345; Plants - 1799; Viruses - 0; Other Eukaryotes - 2382 (source: NCBI BLink). & (gnl|cdd|35467 : 546.0) no description available & (gnl|cdd|30089 : 476.0) no description available & (p46869|fla10_chlre : 157.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1992.0) & (original description: Putative kif6, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'nbv0.5scaffold1827_1440-61996' '(at5g18410 : 2110.0) distorted trichomes and exhibits a diffuse actin cytoskeleton; PIROGI 121 (PIR121); FUNCTIONS IN: transcription activator activity; INVOLVED IN: actin nucleation, trichome morphogenesis, actin cytoskeleton organization; LOCATED IN: SCAR complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytoplasmic FMR1-interacting (InterPro:IPR008081); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69514 : 586.0) no description available & (gnl|cdd|38742 : 580.0) no description available & (reliability: 4220.0) & (original description: Putative KLK, Description = Protein PIR, PFAM = PF05994;PF07159)' T '31.1' 'cell.organisation' 'nbv0.5scaffold1976_345043-355918' '(at2g22610 : 1021.0) Di-glucose binding protein with Kinesin motor domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Malectin/receptor-like protein kinase (InterPro:IPR021720), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Kinesin motor domain (TAIR:AT1G72250.2). & (gnl|cdd|30088 : 472.0) no description available & (gnl|cdd|35460 : 457.0) no description available & (p46869|fla10_chlre : 216.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2042.0) & (original description: Putative v1g161891, Description = Kinesin-like protein, PFAM = PF00225;PF11721)' T '31.1' 'cell.organisation' 'nbv0.5scaffold2023_161083-171376' '(at3g04710 : 327.0) ankyrin repeat family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Tetratricopeptide-like helical (InterPro:IPR011990), Ankyrin repeat-containing domain (InterPro:IPR020683), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1685) (TAIR:AT3G04700.1). & (gnl|cdd|35768 : 135.0) no description available & (gnl|cdd|29261 : 83.6) no description available & (q43468|stip_soybn : 81.6) Heat shock protein STI (Stress-inducible protein) (GmSTI) - Glycine max (Soybean) & (reliability: 654.0) & (original description: Putative pco141871, Description = Os02g0493050 protein, PFAM = PF12796)' T '31.1' 'cell.organisation' 'nbv0.5scaffold2233_251719-261193' '(at3g45850 : 931.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28620.1). & (gnl|cdd|35464 : 763.0) no description available & (o23826|k125_tobac : 654.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (gnl|cdd|30086 : 478.0) no description available & (reliability: 1862.0) & (original description: Putative cos2, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'nbv0.5scaffold2248_137575-154493' '(at5g07740 : 679.0) actin binding; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; EXPRESSED IN: shoot apex, stem; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Tensin phosphatase, C2 domain (InterPro:IPR014020), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 protein (TAIR:AT5G07770.1). & (gnl|cdd|85898 : 386.0) no description available & (gnl|cdd|37135 : 293.0) no description available & (reliability: 1358.0) & (original description: Putative BnaC02g01460D, Description = Formin-like protein, PFAM = PF10409;PF02181)' T '31.1' 'cell.organisation' 'nbv0.5scaffold2262_78187-83142' '(at1g52080 : 278.0) unknown function; AR791; FUNCTIONS IN: actin binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Hydroxyproline-rich glycoprotein family protein (TAIR:AT3G25690.2); Has 24282 Blast hits to 16377 proteins in 1084 species: Archae - 431; Bacteria - 1887; Metazoa - 12444; Fungi - 1813; Plants - 1044; Viruses - 150; Other Eukaryotes - 6513 (source: NCBI BLink). & (reliability: 556.0) & (original description: Putative AR791, Description = Actin binding family protein, putative isoform 2, PFAM = )' T '31.1' 'cell.organisation' 'nbv0.5scaffold2371_305952-310561' '(at2g37080 : 264.0) ROP interactive partner 3 (RIP3); LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: ROP interactive partner 4 (TAIR:AT3G53350.1); Has 147635 Blast hits to 77239 proteins in 3391 species: Archae - 1987; Bacteria - 30902; Metazoa - 62424; Fungi - 12574; Plants - 8109; Viruses - 683; Other Eukaryotes - 30956 (source: NCBI BLink). & (reliability: 528.0) & (original description: Putative p70, Description = P70 protein, PFAM = )' T '31.1' 'cell.organisation' 'nbv0.5scaffold2410_52057-57211' '(at3g61060 : 360.0) phloem protein 2-A13 (PP2-A13); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 718.0) & (original description: Putative P2A12, Description = F-box protein PP2-A12, PFAM = PF14299)' T '31.1' 'cell.organisation' 'nbv0.5scaffold2465_108418-114698' '(at1g72250 : 464.0) Di-glucose binding protein with Kinesin motor domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Malectin/receptor-like protein kinase (InterPro:IPR021720), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Kinesin motor domain (TAIR:AT2G22610.2). & (gnl|cdd|30088 : 269.0) no description available & (gnl|cdd|35460 : 253.0) no description available & (p46869|fla10_chlre : 126.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 928.0) & (original description: Putative ATK4, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'nbv0.5scaffold2670_18145-21299' '(at5g09810 : 634.0) Member of Actin gene family.Mutants are defective in germination and root growth.; actin 7 (ACT7); FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, nucleolus, cell wall, cytoskeleton, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15241 Blast hits to 14839 proteins in 3047 species: Archae - 8; Bacteria - 21; Metazoa - 5732; Fungi - 5247; Plants - 1603; Viruses - 2; Other Eukaryotes - 2628 (source: NCBI BLink). & (p30164|act1_pea : 634.0) Actin-1 - Pisum sativum (Garden pea) & (gnl|cdd|35895 : 535.0) no description available & (gnl|cdd|28896 : 496.0) no description available & (reliability: 1146.0) & (original description: Putative act, Description = Actin, PFAM = PF00022)' T '31.1' 'cell.organisation' 'nbv0.5scaffold2774_39975-42460' '(p93587|act1_soltu : 300.0) Actin-42 (Fragment) - Solanum tuberosum (Potato) & (at5g09810 : 293.0) Member of Actin gene family.Mutants are defective in germination and root growth.; actin 7 (ACT7); FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, nucleolus, cell wall, cytoskeleton, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15241 Blast hits to 14839 proteins in 3047 species: Archae - 8; Bacteria - 21; Metazoa - 5732; Fungi - 5247; Plants - 1603; Viruses - 2; Other Eukaryotes - 2628 (source: NCBI BLink). & (gnl|cdd|35895 : 251.0) no description available & (gnl|cdd|28896 : 228.0) no description available & (reliability: 544.0) & (original description: Putative act, Description = Actin, PFAM = PF00022)' T '31.1' 'cell.organisation' 'nbv0.5scaffold2851_3689-35642' '(at2g35630 : 2616.0) Member of the MAP215 family of microtubule-associated proteins required to establish interphase arrays of cortical microtubules.Mutants have defects in cytokinesis during pollen development. Vegetative phenotypes observed in temperature sensitive mutants include left-handed organ twisting, isotropic cell expansion and impairment of root hair polarity.; MICROTUBULE ORGANIZATION 1 (MOR1); CONTAINS InterPro DOMAIN/s: HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28155.1); Has 1070 Blast hits to 718 proteins in 196 species: Archae - 0; Bacteria - 4; Metazoa - 490; Fungi - 304; Plants - 106; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|37031 : 501.0) no description available & (reliability: 5232.0) & (original description: Putative MOR1, Description = Protein MOR1, PFAM = PF12348)' T '31.1' 'cell.organisation' 'nbv0.5scaffold2990_162637-166028' '(gnl|cdd|39379 : 127.0) no description available & (gnl|cdd|29261 : 106.0) no description available & (at2g03430 : 93.2) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat protein (TAIR:AT5G66055.1); Has 130068 Blast hits to 38689 proteins in 1585 species: Archae - 162; Bacteria - 14649; Metazoa - 59864; Fungi - 13189; Plants - 7735; Viruses - 2061; Other Eukaryotes - 32408 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 82.8) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 186.4) & (original description: Putative Vpyl, Description = Ankyrin repeat, PH and SEC7 domain secG-like protein, PFAM = PF12796;PF12796;PF12796)' T '31.1' 'cell.organisation' 'nbv0.5scaffold3384_234622-245371' '(at3g19050 : 474.0) PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls.; phragmoplast orienting kinesin 2 (POK2); FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: cytokinesis; EXPRESSED IN: root vascular system, primary root tip, lateral root primordium; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast orienting kinesin 1 (TAIR:AT3G17360.1); Has 204267 Blast hits to 80386 proteins in 3219 species: Archae - 3327; Bacteria - 35963; Metazoa - 90351; Fungi - 17822; Plants - 12667; Viruses - 746; Other Eukaryotes - 43391 (source: NCBI BLink). & (gnl|cdd|35383 : 109.0) no description available & (reliability: 948.0) & (original description: Putative POK2, Description = Putative ovule protein, PFAM = )' T '31.1' 'cell.organisation' 'nbv0.5scaffold3597_22535-25835' '(gnl|cdd|29162 : 183.0) no description available & (gnl|cdd|36867 : 179.0) no description available & (at1g62040 : 175.0) autophagy 8c (ATG8C); FUNCTIONS IN: microtubule binding; INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G21980.2). & (reliability: 338.0) & (original description: Putative ATG8C, Description = Autophagy-related protein 8C, PFAM = PF02991)' T '31.1' 'cell.organisation' 'nbv0.5scaffold3955_198343-211343' '(at1g80350 : 481.0) encodes a p60 katanin protein that is expressed throughout the plant. Required for the specification of cell fates from early in development (in the meristem) through differentiation and for normal postmitotic organization of cortical microtubules into transverse arrays in root epidermis cells. Mutants display cytoskeletal defects.; ECTOPIC ROOT HAIR 3 (ERH3); FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: trichome branching, cortical microtubule organization, multidimensional cell growth, plant-type cell wall biogenesis, microtubule cytoskeleton organization; LOCATED IN: katanin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Vps4 oligomerisation, C-terminal (InterPro:IPR015415); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G34560.1); Has 31677 Blast hits to 29370 proteins in 3124 species: Archae - 1478; Bacteria - 12054; Metazoa - 4742; Fungi - 3292; Plants - 2928; Viruses - 23; Other Eukaryotes - 7160 (source: NCBI BLink). & (gnl|cdd|35957 : 469.0) no description available & (gnl|cdd|30812 : 242.0) no description available & (q96372|cdc48_capan : 193.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 962.0) & (original description: Putative KATL1, Description = Katanin p60 ATPase-containing subunit A-like 1, PFAM = PF09336;PF00004)' T '31.1' 'cell.organisation' 'nbv0.5scaffold3974_31065-44006' '(at5g07740 : 676.0) actin binding; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; EXPRESSED IN: shoot apex, stem; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Tensin phosphatase, C2 domain (InterPro:IPR014020), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 protein (TAIR:AT5G07770.1). & (gnl|cdd|85898 : 393.0) no description available & (gnl|cdd|37135 : 292.0) no description available & (reliability: 1352.0) & (original description: Putative PGSC0003DMG400024560, Description = Formin-like protein, PFAM = PF02181;PF10409)' T '31.1' 'cell.organisation' 'nbv0.5scaffold4171_193204-202296' '(at1g43700 : 140.0) Encodes a VirE2-interacting protein. VIP1 mediates nuclear translocation of VirE2 via its amino half, and interacts with histone H2A via it carboxyl half.; VIRE2-interacting protein 1 (VIP1); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to sulfate starvation, sulfate transport, DNA mediated transformation, nuclear import; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT1G06070.1); Has 1450 Blast hits to 1450 proteins in 153 species: Archae - 0; Bacteria - 51; Metazoa - 59; Fungi - 47; Plants - 1254; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 125.0) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 280.0) & (original description: Putative rsg, Description = BZIP transcription factor, PFAM = PF00170)' T '31.1' 'cell.organisation' 'nbv0.5scaffold4171_193678-203596' '(at1g43700 : 196.0) Encodes a VirE2-interacting protein. VIP1 mediates nuclear translocation of VirE2 via its amino half, and interacts with histone H2A via it carboxyl half.; VIRE2-interacting protein 1 (VIP1); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to sulfate starvation, sulfate transport, DNA mediated transformation, nuclear import; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT1G06070.1); Has 1450 Blast hits to 1450 proteins in 153 species: Archae - 0; Bacteria - 51; Metazoa - 59; Fungi - 47; Plants - 1254; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 163.0) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 392.0) & (original description: Putative rsg, Description = BZIP transcriptional activator RSG, PFAM = PF00170)' T '31.1' 'cell.organisation' 'nbv0.5scaffold4331_908-11188' '(at4g35450 : 380.0) Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.; ankyrin repeat-containing protein 2 (AKR2); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1). & (gnl|cdd|29261 : 117.0) no description available & (gnl|cdd|39379 : 90.8) no description available & (reliability: 760.0) & (original description: Putative TIP3, Description = TGB12K interacting protein 3, PFAM = PF12796)' T '31.1' 'cell.organisation' 'nbv0.5scaffold4442_97994-114499' '(at1g35720 : 113.0) Encodes a member of the annexin gene family, a diverse, multigene family of calcium-dependent, membrane-binding proteins. The protein was determined to have peroxidase activity. This activity is thought to be dependent on the presence of post-translational modifications (most likely phosphorylation). The protein was shown to be present as a mixture of monomer and homodimer. The homodimerization seems to be dependent on the presence of Ca2+ or H2O2. The dimerization was prevented by the addition of DTT, β-mercaptoethanol and TCEP. Annat1 mRNA is expressed in flowers, roots,leaves and stems and is most abundant in stems. mRNA levels are increased in response to oxidative stress. Developmental expression patterns suggest a role in Golgi-mediated polysaccharide secretion.; annexin 1 (ANNAT1); FUNCTIONS IN: in 7 functions; INVOLVED IN: in 8 processes; LOCATED IN: in 10 components; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464), Annexin, type plant (InterPro:IPR009118); BEST Arabidopsis thaliana protein match is: annexin 2 (TAIR:AT5G65020.1); Has 3809 Blast hits to 2217 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 2893; Fungi - 160; Plants - 482; Viruses - 0; Other Eukaryotes - 274 (source: NCBI BLink). & (gnl|cdd|36037 : 101.0) no description available & (p51074|anx4_fraan : 85.9) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (reliability: 226.0) & (original description: Putative an34, Description = Annexin, PFAM = PF00191)' T '31.1' 'cell.organisation' 'nbv0.5scaffold4591_145447-148861' '(at3g50390 : 259.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G26490.1); Has 33178 Blast hits to 17374 proteins in 678 species: Archae - 38; Bacteria - 5184; Metazoa - 12049; Fungi - 7688; Plants - 3936; Viruses - 0; Other Eukaryotes - 4283 (source: NCBI BLink). & (gnl|cdd|29257 : 144.0) no description available & (gnl|cdd|35495 : 89.7) no description available & (reliability: 518.0) & (original description: Putative glysoja_017805, Description = Lissencephaly-1 like, PFAM = PF00400;PF00400;PF00400)' T '31.1' 'cell.organisation' 'nbv0.5scaffold5394_108810-119107' '(at3g10310 : 775.0) P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 4 (TAIR:AT5G27000.1); Has 11194 Blast hits to 10379 proteins in 346 species: Archae - 2; Bacteria - 8; Metazoa - 5167; Fungi - 1411; Plants - 1943; Viruses - 0; Other Eukaryotes - 2663 (source: NCBI BLink). & (gnl|cdd|35460 : 447.0) no description available & (gnl|cdd|30088 : 413.0) no description available & (p46870|klp1_chlre : 190.0) Kinesin-like protein KLP1 - Chlamydomonas reinhardtii & (reliability: 1550.0) & (original description: Putative kch2, Description = Kinesin-like protein, PFAM = PF00307;PF00225)' T '31.1' 'cell.organisation' 'nbv0.5scaffold5590_76967-90791' '(at4g18950 : 585.0) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Integrin-linked protein kinase (InterPro:IPR016253), Ankyrin repeat-containing domain (InterPro:IPR020683), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G58760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 243.0) no description available & (gnl|cdd|84488 : 188.0) no description available & (q6x4a2|cipk1_orysa : 108.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1170.0) & (original description: Putative APK1, Description = Ankyrin-kinase protein, PFAM = PF07714;PF12796)' T '31.1' 'cell.organisation' 'nbv0.5scaffold5663_68214-84980' '(at1g20060 : 338.0) ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G60930.1); Has 10625 Blast hits to 10139 proteins in 419 species: Archae - 2; Bacteria - 255; Metazoa - 4769; Fungi - 1373; Plants - 1690; Viruses - 3; Other Eukaryotes - 2533 (source: NCBI BLink). & (gnl|cdd|30083 : 237.0) no description available & (gnl|cdd|35463 : 198.0) no description available & (reliability: 676.0) & (original description: Putative KIN6, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'nbv0.5scaffold6613_50409-54625' '(at1g74790 : 531.0) catalytics; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Soluble quinoprotein glucose/sorbosone dehydrogenase (InterPro:IPR011041), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: hipl2 protein precursor (TAIR:AT5G62630.1); Has 3691 Blast hits to 3691 proteins in 820 species: Archae - 60; Bacteria - 1937; Metazoa - 139; Fungi - 4; Plants - 281; Viruses - 0; Other Eukaryotes - 1270 (source: NCBI BLink). & (reliability: 1062.0) & (original description: Putative hipl1, Description = HIPL1 protein, PFAM = PF07995)' T '31.1' 'cell.organisation' 'nbv0.5scaffold6909_1963-10142' '(at3g53000 : 422.0) phloem protein 2-A15 (PP2-A15); FUNCTIONS IN: carbohydrate binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 510 Blast hits to 504 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 510; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 844.0) & (original description: Putative PP2A15, Description = F-box protein PP2-A15, PFAM = PF14299)' T '31.1' 'cell.organisation' 'nbv0.5scaffold6964_2906-12143' '(at3g45850 : 1338.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28620.1). & (gnl|cdd|35464 : 1009.0) no description available & (o23826|k125_tobac : 790.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (gnl|cdd|30086 : 530.0) no description available & (reliability: 2676.0) & (original description: Putative KIN5D, Description = Kinesin-like protein KIN-5D, PFAM = PF00225)' T '31.1' 'cell.organisation' 'nbv0.5scaffold7505_34650-39486' '(at5g40160 : 285.0) Encodes ankyrin repeat protein EMB506. Mutations in this locus result in embryo lethality.; embryo defective 506 (EMB506); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat protein (TAIR:AT5G66055.1); Has 90387 Blast hits to 29284 proteins in 1374 species: Archae - 134; Bacteria - 8440; Metazoa - 46466; Fungi - 7182; Plants - 3258; Viruses - 1346; Other Eukaryotes - 23561 (source: NCBI BLink). & (gnl|cdd|29261 : 120.0) no description available & (gnl|cdd|35729 : 109.0) no description available & (reliability: 570.0) & (original description: Putative EMB506, Description = Ankyrin repeat domain-containing protein EMB506, chloroplastic, PFAM = PF12796)' T '31.1' 'cell.organisation' 'nbv0.5scaffold8012_19558-52079' '(at5g07740 : 667.0) actin binding; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; EXPRESSED IN: shoot apex, stem; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Tensin phosphatase, C2 domain (InterPro:IPR014020), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 protein (TAIR:AT5G07770.1). & (gnl|cdd|85898 : 336.0) no description available & (gnl|cdd|37135 : 242.0) no description available & (reliability: 1334.0) & (original description: Putative FH12, Description = Formin-like protein, PFAM = PF02181;PF02181;PF10409)' T '31.1' 'cell.organisation' 'nbv0.5scaffold8417_14151-20875' '(at2g01680 : 679.0) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT2G31820.1); Has 36872 Blast hits to 17947 proteins in 711 species: Archae - 48; Bacteria - 2509; Metazoa - 18623; Fungi - 3211; Plants - 2983; Viruses - 164; Other Eukaryotes - 9334 (source: NCBI BLink). & (gnl|cdd|39379 : 100.0) no description available & (gnl|cdd|29261 : 93.6) no description available & (reliability: 1358.0) & (original description: Putative At2g01680, Description = Ankyrin repeat-containing protein At2g01680, PFAM = PF12796;PF12796;PF13962)' T '31.1' 'cell.organisation' 'nbv0.5scaffold11613_1244-3159' '(at2g18280 : 204.0) Member of TLP family; tubby like protein 2 (TLP2); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 3 (TAIR:AT2G47900.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37713 : 149.0) no description available & (reliability: 408.0) & (original description: Putative TULP1, Description = Tubby-like F-box protein, PFAM = PF00646;PF01167)' T '31.1' 'cell.organisation' 'niben044scf00000055ctg001_1378-6109' '(at1g42550 : 719.0) Encodes a plant-specific protein of unknown function that appears to be conserved among angiosperms.; PLASTID MOVEMENT IMPAIRED1 (PMI1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chloroplast relocation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G20610.1); Has 1448 Blast hits to 1079 proteins in 174 species: Archae - 4; Bacteria - 103; Metazoa - 395; Fungi - 128; Plants - 164; Viruses - 85; Other Eukaryotes - 569 (source: NCBI BLink). & (reliability: 1438.0) & (original description: Putative PMI1, Description = Protein PLASTID MOVEMENT IMPAIRED 1, PFAM = PF10358)' T '31.1' 'cell.organisation' 'niben044scf00000449ctg003_297-10035' '(at1g18450 : 226.0) Encodes a gene similar to actin-related proteins in other organisms. Member of nuclear ARP family of genes. Component of chromatin remodeling complexes, involved in chromatin-mediated gene regulation. Phenotype of the arp4-1 mutant allele revealed partial sterility due to defects in anther development. Targeting the distinct, 3' UTR of AtARP4 transcripts with RNA interference caused a drastic reduction in the level of AtARP4 protein expression, and resulted in strong pleiotropic phenotypes such as altered organization of plant organs, early flowering, delayed flower senescence and high levels of sterility. Western blot analysis and immunolabelling demonstrated a clear correlation between reductions in the level of AtARP4 expression and severity of the phenotypes.; actin-related protein 4 (ARP4); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: long-day photoperiodism, flowering, chromatin organization, pollen sperm cell differentiation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: actin-11 (TAIR:AT3G12110.1); Has 13669 Blast hits to 13362 proteins in 2792 species: Archae - 2; Bacteria - 480; Metazoa - 5593; Fungi - 3430; Plants - 1457; Viruses - 2; Other Eukaryotes - 2705 (source: NCBI BLink). & (gnl|cdd|84448 : 190.0) no description available & (gnl|cdd|35898 : 188.0) no description available & (p53491|act_acecl : 120.0) Actin (Fragment) - Acetabularia cliftonii (Green alga) & (reliability: 452.0) & (original description: Putative arpD, Description = Actin-like protein 6A, PFAM = PF00022)' T '31.1' 'cell.organisation' 'niben044scf00000449ctg003_4351-11097' '(at1g18450 : 150.0) Encodes a gene similar to actin-related proteins in other organisms. Member of nuclear ARP family of genes. Component of chromatin remodeling complexes, involved in chromatin-mediated gene regulation. Phenotype of the arp4-1 mutant allele revealed partial sterility due to defects in anther development. Targeting the distinct, 3' UTR of AtARP4 transcripts with RNA interference caused a drastic reduction in the level of AtARP4 protein expression, and resulted in strong pleiotropic phenotypes such as altered organization of plant organs, early flowering, delayed flower senescence and high levels of sterility. Western blot analysis and immunolabelling demonstrated a clear correlation between reductions in the level of AtARP4 expression and severity of the phenotypes.; actin-related protein 4 (ARP4); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: long-day photoperiodism, flowering, chromatin organization, pollen sperm cell differentiation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: actin-11 (TAIR:AT3G12110.1); Has 13669 Blast hits to 13362 proteins in 2792 species: Archae - 2; Bacteria - 480; Metazoa - 5593; Fungi - 3430; Plants - 1457; Viruses - 2; Other Eukaryotes - 2705 (source: NCBI BLink). & (gnl|cdd|35898 : 105.0) no description available & (gnl|cdd|84448 : 104.0) no description available & (reliability: 300.0) & (original description: Putative ARP4, Description = Actin-related protein 4, PFAM = PF00022)' T '31.1' 'cell.organisation' 'niben044scf00000881ctg025_1-2503' '(at2g21950 : 363.0) Encodes an SKP1 interacting partner (SKIP6).; SKP1 interacting partner 6 (SKIP6); CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT4G39550.1); Has 5633 Blast hits to 4259 proteins in 231 species: Archae - 10; Bacteria - 283; Metazoa - 3617; Fungi - 16; Plants - 1462; Viruses - 63; Other Eukaryotes - 182 (source: NCBI BLink). & (gnl|cdd|39642 : 110.0) no description available & (reliability: 726.0) & (original description: Putative SKIP6, Description = F-box/kelch-repeat protein SKIP6, PFAM = PF01344;PF01344;PF00646)' T '31.1' 'cell.organisation' 'niben044scf00000891ctg005_86-3639' '(at4g10840 : 580.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G27960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37051 : 263.0) no description available & (reliability: 1160.0) & (original description: Putative umc2530, Description = Nephrocystin-3, PFAM = PF13424;PF13424)' T '31.1' 'cell.organisation' 'niben044scf00001741ctg002_1-10437' '(at5g65460 : 838.0) Kinesin that binds cyclin-dependent kinase CDKA;1 as homodimer or as heterodimer with KCA1; kinesin like protein for actin based chloroplast movement 2 (KAC2); FUNCTIONS IN: microtubule binding, protein binding, microtubule motor activity; INVOLVED IN: chloroplast avoidance movement, chloroplast accumulation movement; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin like protein for actin based chloroplast movement 1 (TAIR:AT5G10470.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35460 : 139.0) no description available & (reliability: 1676.0) & (original description: Putative KAC1, Description = Geminivirus Rep-interacting motor protein, PFAM = )' T '31.1' 'cell.organisation' 'niben044scf00002176ctg015_3891-7895' '(at2g18280 : 458.0) Member of TLP family; tubby like protein 2 (TLP2); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 3 (TAIR:AT2G47900.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37713 : 391.0) no description available & (gnl|cdd|85281 : 278.0) no description available & (reliability: 916.0) & (original description: Putative TULP1, Description = Tubby-like F-box protein, PFAM = PF00646;PF01167)' T '31.1' 'cell.organisation' 'niben044scf00002385ctg000_1-1989' '(at1g43700 : 83.2) Encodes a VirE2-interacting protein. VIP1 mediates nuclear translocation of VirE2 via its amino half, and interacts with histone H2A via it carboxyl half.; VIRE2-interacting protein 1 (VIP1); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to sulfate starvation, sulfate transport, DNA mediated transformation, nuclear import; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT1G06070.1); Has 1450 Blast hits to 1450 proteins in 153 species: Archae - 0; Bacteria - 51; Metazoa - 59; Fungi - 47; Plants - 1254; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative rsg, Description = Putative transcription factor PosF21, PFAM = )' T '31.1' 'cell.organisation' 'niben044scf00002538ctg001_3627-7088' '(p30171|act11_soltu : 605.0) Actin-97 - Solanum tuberosum (Potato) & (at5g09810 : 597.0) Member of Actin gene family.Mutants are defective in germination and root growth.; actin 7 (ACT7); FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, nucleolus, cell wall, cytoskeleton, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15241 Blast hits to 14839 proteins in 3047 species: Archae - 8; Bacteria - 21; Metazoa - 5732; Fungi - 5247; Plants - 1603; Viruses - 2; Other Eukaryotes - 2628 (source: NCBI BLink). & (gnl|cdd|35895 : 517.0) no description available & (gnl|cdd|84448 : 473.0) no description available & (reliability: 1082.0) & (original description: Putative act, Description = Actin, PFAM = PF00022)' T '31.1' 'cell.organisation' 'niben044scf00002812ctg013_20242-25759' '(at4g35450 : 380.0) Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.; ankyrin repeat-containing protein 2 (AKR2); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1). & (gnl|cdd|29261 : 117.0) no description available & (gnl|cdd|39379 : 90.8) no description available & (reliability: 760.0) & (original description: Putative AKR2B, Description = Ankyrin repeat domain-containing protein 2B, PFAM = PF12796)' T '31.1' 'cell.organisation' 'niben044scf00002845ctg006_1323-4578' '(at1g01950 : 314.0) Encodes a member of the armadillo/beta-catenin repeat kinesin motor family. Mutants have twisted roots due to abnormal cell file rotation; the phenotype is dependent on microtubules.; armadillo repeat kinesin 2 (ARK2); FUNCTIONS IN: microtubule motor activity, binding, ATP binding; INVOLVED IN: root development; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: armadillo repeat kinesin 3 (TAIR:AT1G12430.1); Has 18598 Blast hits to 15978 proteins in 689 species: Archae - 52; Bacteria - 737; Metazoa - 7861; Fungi - 1903; Plants - 2828; Viruses - 15; Other Eukaryotes - 5202 (source: NCBI BLink). & (reliability: 628.0) & (original description: Putative ARK1, Description = Kinesin-like protein, PFAM = )' T '31.1' 'cell.organisation' 'niben044scf00002845ctg008_1-8687' '(at1g12430 : 714.0) Encodes the kinesin-like protein PAK has an Armadillo motif tail and is involved in guard cell development in Arabidopsis (from Genbank record AF159052).However, no defect in stomatal complexes has been observed in loss of function mutations.; armadillo repeat kinesin 3 (ARK3); FUNCTIONS IN: microtubule motor activity, binding, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: armadillo repeat kinesin 2 (TAIR:AT1G01950.1). & (gnl|cdd|35461 : 329.0) no description available & (gnl|cdd|84623 : 318.0) no description available & (p46870|klp1_chlre : 180.0) Kinesin-like protein KLP1 - Chlamydomonas reinhardtii & (reliability: 1428.0) & (original description: Putative kif3, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben044scf00003316ctg007_2470-7097' '(gnl|cdd|29162 : 191.0) no description available & (at1g62040 : 189.0) autophagy 8c (ATG8C); FUNCTIONS IN: microtubule binding; INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G21980.2). & (gnl|cdd|36867 : 188.0) no description available & (reliability: 362.0) & (original description: Putative ATG8C, Description = Autophagy-related protein 8C, PFAM = PF02991)' T '31.1' 'cell.organisation' 'niben044scf00003513ctg005_10595-14034' '(at2g28840 : 509.0) XB3 ortholog 1 in Arabidopsis thaliana (XBAT31); FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 3 in Arabidopsis thaliana (TAIR:AT5G07270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29261 : 110.0) no description available & (gnl|cdd|35729 : 103.0) no description available & (reliability: 1018.0) & (original description: Putative XBAT31, Description = Putative E3 ubiquitin-protein ligase XBAT31, PFAM = PF12796;PF13857;PF13637)' T '31.1' 'cell.organisation' 'niben044scf00003904ctg010_7849-27314' '(at1g55550 : 480.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: mitochondrion; EXPRESSED IN: seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G27950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30088 : 408.0) no description available & (gnl|cdd|35460 : 330.0) no description available & (o23826|k125_tobac : 159.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 960.0) & (original description: Putative kifc3, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben044scf00004498ctg000_1665-6170' '(at1g74790 : 743.0) catalytics; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Soluble quinoprotein glucose/sorbosone dehydrogenase (InterPro:IPR011041), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: hipl2 protein precursor (TAIR:AT5G62630.1); Has 3691 Blast hits to 3691 proteins in 820 species: Archae - 60; Bacteria - 1937; Metazoa - 139; Fungi - 4; Plants - 281; Viruses - 0; Other Eukaryotes - 1270 (source: NCBI BLink). & (gnl|cdd|32316 : 92.8) no description available & (reliability: 1486.0) & (original description: Putative hipl1, Description = Hedgehog-interacting protein 1, PFAM = PF07995)' T '31.1' 'cell.organisation' 'niben044scf00004897ctg007_1-5638' '(at2g01680 : 671.0) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT2G31820.1); Has 36872 Blast hits to 17947 proteins in 711 species: Archae - 48; Bacteria - 2509; Metazoa - 18623; Fungi - 3211; Plants - 2983; Viruses - 164; Other Eukaryotes - 9334 (source: NCBI BLink). & (gnl|cdd|35729 : 102.0) no description available & (gnl|cdd|29261 : 95.9) no description available & (reliability: 1342.0) & (original description: Putative At2g01680, Description = Ankyrin repeat-containing protein At2g01680, PFAM = PF00023;PF12796;PF12796;PF13962)' T '31.1' 'cell.organisation' 'niben044scf00005744ctg006_16707-21071' '(at2g31820 : 465.0) Ankyrin repeat family protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT1G05640.1); Has 69909 Blast hits to 28585 proteins in 1153 species: Archae - 97; Bacteria - 6878; Metazoa - 33005; Fungi - 7349; Plants - 5597; Viruses - 621; Other Eukaryotes - 16362 (source: NCBI BLink). & (gnl|cdd|29261 : 82.8) no description available & (reliability: 930.0) & (original description: Putative IGN1, Description = Ankyrin repeat-containing protein, PFAM = PF13857;PF13962;PF13637)' T '31.1' 'cell.organisation' 'niben044scf00005744ctg006_17025-21072' '(at2g31820 : 331.0) Ankyrin repeat family protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT1G05640.1); Has 69909 Blast hits to 28585 proteins in 1153 species: Archae - 97; Bacteria - 6878; Metazoa - 33005; Fungi - 7349; Plants - 5597; Viruses - 621; Other Eukaryotes - 16362 (source: NCBI BLink). & (gnl|cdd|29261 : 80.5) no description available & (reliability: 662.0) & (original description: Putative BnaCnng28210D, Description = BnaCnng28210D protein, PFAM = PF13637;PF13962;PF13857)' T '31.1' 'cell.organisation' 'niben044scf00006149ctg005_12924-16342' '(gnl|cdd|39379 : 125.0) no description available & (gnl|cdd|29261 : 105.0) no description available & (at2g03430 : 91.3) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat protein (TAIR:AT5G66055.1); Has 130068 Blast hits to 38689 proteins in 1585 species: Archae - 162; Bacteria - 14649; Metazoa - 59864; Fungi - 13189; Plants - 7735; Viruses - 2061; Other Eukaryotes - 32408 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 83.2) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 182.6) & (original description: Putative Vpyl, Description = Ankyrin repeat, PH and SEC7 domain secG-like protein, PFAM = PF12796;PF12796;PF13637)' T '31.1' 'cell.organisation' 'niben044scf00006315ctg016_134-9560' '(at5g17410 : 790.0) Spc97 / Spc98 family of spindle pole body (SBP) component; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: spindle pole body component 98 (TAIR:AT5G06680.1); Has 1351 Blast hits to 1243 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 645; Fungi - 324; Plants - 181; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (gnl|cdd|37212 : 560.0) no description available & (gnl|cdd|67734 : 378.0) no description available & (q9sc88|gcp4_medtr : 89.0) Gamma-tubulin complex component 4 homolog - Medicago truncatula (Barrel medic) & (reliability: 1580.0) & (original description: Putative GCP2, Description = Gamma-tubulin complex component 2, PFAM = PF04130)' T '31.1' 'cell.organisation' 'niben044scf00006803ctg007_1758-5387' '(at1g21730 : 162.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G06670.1); Has 16169 Blast hits to 14119 proteins in 580 species: Archae - 38; Bacteria - 464; Metazoa - 7403; Fungi - 1809; Plants - 2013; Viruses - 19; Other Eukaryotes - 4423 (source: NCBI BLink). & (gnl|cdd|30096 : 145.0) no description available & (gnl|cdd|35463 : 142.0) no description available & (reliability: 324.0) & (original description: Putative kipA, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben044scf00006803ctg008_1538-10462' '(at1g21730 : 437.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G06670.1); Has 16169 Blast hits to 14119 proteins in 580 species: Archae - 38; Bacteria - 464; Metazoa - 7403; Fungi - 1809; Plants - 2013; Viruses - 19; Other Eukaryotes - 4423 (source: NCBI BLink). & (gnl|cdd|35463 : 122.0) no description available & (gnl|cdd|30096 : 104.0) no description available & (reliability: 874.0) & (original description: Putative kif11, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben044scf00006820ctg008_9894-15580' '(at1g72250 : 833.0) Di-glucose binding protein with Kinesin motor domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Malectin/receptor-like protein kinase (InterPro:IPR021720), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Kinesin motor domain (TAIR:AT2G22610.2). & (gnl|cdd|30088 : 480.0) no description available & (gnl|cdd|35460 : 438.0) no description available & (p46869|fla10_chlre : 211.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1666.0) & (original description: Putative kch2, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben044scf00007370ctg008_2159-7711' '(at2g37080 : 274.0) ROP interactive partner 3 (RIP3); LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: ROP interactive partner 4 (TAIR:AT3G53350.1); Has 147635 Blast hits to 77239 proteins in 3391 species: Archae - 1987; Bacteria - 30902; Metazoa - 62424; Fungi - 12574; Plants - 8109; Viruses - 683; Other Eukaryotes - 30956 (source: NCBI BLink). & (reliability: 548.0) & (original description: Putative p70, Description = P70 protein, PFAM = )' T '31.1' 'cell.organisation' 'niben044scf00007385ctg005_682-6749' '(at5g08120 : 164.0) Microtubule-associated and viral movement protein binding protein. Negatively regulates KN1 association to plasmodesmata and, consequently, cell-to-cell transport. Involved in the alignment of cortical microtubules, the patterning of stomata and in restricting tobamoviral infections.; movement protein binding protein 2C (MPB2C); Has 5726 Blast hits to 4344 proteins in 670 species: Archae - 77; Bacteria - 646; Metazoa - 3260; Fungi - 443; Plants - 256; Viruses - 12; Other Eukaryotes - 1032 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative MPB2Cb, Description = MPB2C-like protein, PFAM = )' T '31.1' 'cell.organisation' 'niben044scf00009306ctg008_1812-16261' '(at3g10180 : 263.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G59540.1); Has 155291 Blast hits to 84008 proteins in 3275 species: Archae - 1854; Bacteria - 27736; Metazoa - 67441; Fungi - 13681; Plants - 10077; Viruses - 530; Other Eukaryotes - 33972 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative KIN7O, Description = Centromere-associated protein E, PFAM = )' T '31.1' 'cell.organisation' 'niben044scf00009485ctg000_1-2002' '(at2g37420 : 153.0) ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G45850.2); Has 44433 Blast hits to 32365 proteins in 1868 species: Archae - 445; Bacteria - 6202; Metazoa - 19487; Fungi - 4140; Plants - 3247; Viruses - 113; Other Eukaryotes - 10799 (source: NCBI BLink). & (o23826|k125_tobac : 138.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35464 : 130.0) no description available & (gnl|cdd|30086 : 119.0) no description available & (reliability: 306.0) & (original description: Putative KIN4, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben044scf00009856ctg012_1078-4129' '(at5g09820 : 104.0) Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: Plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT3G26070.1); Has 405 Blast hits to 405 proteins in 80 species: Archae - 0; Bacteria - 95; Metazoa - 0; Fungi - 0; Plants - 302; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative FBN5, Description = Os04g0422000 protein, PFAM = PF04755)' T '31.1' 'cell.organisation' 'niben044scf00009866ctg004_15397-19978' '(at5g65020 : 381.0) Annexins are calcium binding proteins that are localized in the cytoplasm. When cytosolic Ca2+ increases, they relocate to the plasma membrane. They may be involved in the Golgi-mediated secretion of polysaccharides.; annexin 2 (ANNAT2); FUNCTIONS IN: calcium-dependent phospholipid binding, calcium ion binding; INVOLVED IN: polysaccharide transport, response to water deprivation, response to salt stress, response to cold, response to heat; LOCATED IN: cytosol, nucleus, cell surface; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464), Annexin, type plant (InterPro:IPR009118); BEST Arabidopsis thaliana protein match is: annexin 7 (TAIR:AT5G10230.1); Has 4555 Blast hits to 2244 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 3503; Fungi - 207; Plants - 559; Viruses - 0; Other Eukaryotes - 286 (source: NCBI BLink). & (gnl|cdd|36037 : 352.0) no description available & (p51074|anx4_fraan : 314.0) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (reliability: 762.0) & (original description: Putative ANN2, Description = Annexin D2, PFAM = PF00191;PF00191;PF00191;PF00191)' T '31.1' 'cell.organisation' 'niben044scf00011129ctg000_1244-5410' '(p80471|lipc_soltu : 435.0) Light-induced protein, chloroplast precursor (Chloroplastic drought-induced stress protein CDSP-34) - Solanum tuberosum (Potato) & (at4g04020 : 296.0) Fibrillin precursor protein. The fibrillin preprotein, but not the mature protein interacts with ABI2. Regulated by abscisic acid response regulators. Involved in abscisic acid-mediated photoprotection.; fibrillin (FIB); FUNCTIONS IN: structural molecule activity; INVOLVED IN: photoinhibition, response to cold, response to abscisic acid stimulus; LOCATED IN: in 8 components; EXPRESSED IN: fruit, guard cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: Plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT4G22240.1); Has 435 Blast hits to 434 proteins in 78 species: Archae - 0; Bacteria - 75; Metazoa - 0; Fungi - 0; Plants - 340; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|68332 : 224.0) no description available & (reliability: 592.0) & (original description: Putative CHRC, Description = Plastid lipid-associated protein 3, chloroplastic, PFAM = PF04755)' T '31.1' 'cell.organisation' 'niben044scf00012420ctg002_1-12670' '(at2g35630 : 1808.0) Member of the MAP215 family of microtubule-associated proteins required to establish interphase arrays of cortical microtubules.Mutants have defects in cytokinesis during pollen development. Vegetative phenotypes observed in temperature sensitive mutants include left-handed organ twisting, isotropic cell expansion and impairment of root hair polarity.; MICROTUBULE ORGANIZATION 1 (MOR1); CONTAINS InterPro DOMAIN/s: HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28155.1); Has 1070 Blast hits to 718 proteins in 196 species: Archae - 0; Bacteria - 4; Metazoa - 490; Fungi - 304; Plants - 106; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|37031 : 495.0) no description available & (reliability: 3616.0) & (original description: Putative GEM1, Description = Protein MOR1, PFAM = )' T '31.1' 'cell.organisation' 'niben044scf00012650ctg008_4488-8363' '(at3g23280 : 87.8) XB3 ortholog 5 in Arabidopsis thaliana (XBAT35); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 4 in Arabidopsis thaliana (TAIR:AT4G14365.1); Has 26382 Blast hits to 15025 proteins in 882 species: Archae - 61; Bacteria - 2221; Metazoa - 14003; Fungi - 1495; Plants - 1186; Viruses - 392; Other Eukaryotes - 7024 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative XBAT35, Description = Zinc finger family protein, PFAM = PF13920)' T '31.1' 'cell.organisation' 'niben044scf00012763ctg018_3742-7630' '(at1g47270 : 458.0) Member of TLP family; tubby like protein 6 (TLP6); FUNCTIONS IN: phosphoric diester hydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 2 (TAIR:AT2G18280.2). & (gnl|cdd|37713 : 391.0) no description available & (gnl|cdd|85281 : 284.0) no description available & (reliability: 842.0) & (original description: Putative TULP6, Description = Tubby-like F-box protein 6, PFAM = PF00646;PF01167)' T '31.1' 'cell.organisation' 'niben044scf00012918ctg006_1-6532' '(at4g18950 : 228.0) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Integrin-linked protein kinase (InterPro:IPR016253), Ankyrin repeat-containing domain (InterPro:IPR020683), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G58760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 134.0) no description available & (gnl|cdd|87344 : 112.0) no description available & (reliability: 456.0) & (original description: Putative PGSC0003DMG401030595, Description = Integrin-linked protein kinase family, PFAM = PF07714;PF12796)' T '31.1' 'cell.organisation' 'niben044scf00013101ctg003_2784-6946' '(at4g39050 : 306.0) Kinesin motor family protein; FUNCTIONS IN: microtubule motor activity, zinc ion binding, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Zinc finger, RING-type (InterPro:IPR001841), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: Kinesin motor family protein (TAIR:AT2G21380.1); Has 46191 Blast hits to 32952 proteins in 1570 species: Archae - 362; Bacteria - 3539; Metazoa - 22005; Fungi - 4349; Plants - 4299; Viruses - 335; Other Eukaryotes - 11302 (source: NCBI BLink). & (gnl|cdd|30096 : 216.0) no description available & (gnl|cdd|35463 : 198.0) no description available & (p46869|fla10_chlre : 112.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 612.0) & (original description: Putative cenpe, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben044scf00013475ctg016_1-7843' '(at1g20060 : 352.0) ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G60930.1); Has 10625 Blast hits to 10139 proteins in 419 species: Archae - 2; Bacteria - 255; Metazoa - 4769; Fungi - 1373; Plants - 1690; Viruses - 3; Other Eukaryotes - 2533 (source: NCBI BLink). & (gnl|cdd|30083 : 237.0) no description available & (gnl|cdd|35463 : 199.0) no description available & (reliability: 704.0) & (original description: Putative KIN6, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben044scf00013649ctg003_743-6346' '(at1g52080 : 234.0) unknown function; AR791; FUNCTIONS IN: actin binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Hydroxyproline-rich glycoprotein family protein (TAIR:AT3G25690.2); Has 24282 Blast hits to 16377 proteins in 1084 species: Archae - 431; Bacteria - 1887; Metazoa - 12444; Fungi - 1813; Plants - 1044; Viruses - 150; Other Eukaryotes - 6513 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative AR791, Description = CHUP1-like protein, PFAM = )' T '31.1' 'cell.organisation' 'niben044scf00013845ctg000_7402-23948' '(at1g20060 : 387.0) ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G60930.1); Has 10625 Blast hits to 10139 proteins in 419 species: Archae - 2; Bacteria - 255; Metazoa - 4769; Fungi - 1373; Plants - 1690; Viruses - 3; Other Eukaryotes - 2533 (source: NCBI BLink). & (gnl|cdd|30083 : 235.0) no description available & (gnl|cdd|35463 : 193.0) no description available & (o23826|k125_tobac : 90.9) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 774.0) & (original description: Putative KIN6, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben044scf00013964ctg014_1-4134' '(at3g09890 : 224.0) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing protein 2 (TAIR:AT4G35450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29261 : 99.0) no description available & (gnl|cdd|35729 : 89.7) no description available & (reliability: 448.0) & (original description: Putative BnaC03g35800D, Description = BnaC03g35800D protein, PFAM = PF12796;PF13857)' T '31.1' 'cell.organisation' 'niben044scf00014090ctg006_203-6498' '(at5g02130 : 356.0) mutant has Growth rate reduction, increased salt sensitivity; Putative Kinesin Light Chain; NDP1; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990); Has 225 Blast hits to 173 proteins in 57 species: Archae - 4; Bacteria - 100; Metazoa - 49; Fungi - 9; Plants - 38; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 712.0) & (original description: Putative NDP1, Description = At5g02130, PFAM = )' T '31.1' 'cell.organisation' 'niben044scf00015148ctg000_2061-6105' '(at5g53400 : 194.0) Encodes BOBBER1 (BOB1), a non-canonical small heat shock protein required for both development and thermotolerance. BOB1 is cytoplasmic at basal temperatures but forms heat shock granules containing canonical small heat shock proteins at high temperatures.; BOBBER1 (BOB1); CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT4G27890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37476 : 178.0) no description available & (reliability: 388.0) & (original description: Putative nudC, Description = Nuclear migration protein nudC, PFAM = PF04969)' T '31.1' 'cell.organisation' 'niben044scf00015148ctg001_1-2518' '(at4g27890 : 207.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G53400.1); Has 1077 Blast hits to 1040 proteins in 209 species: Archae - 0; Bacteria - 27; Metazoa - 492; Fungi - 104; Plants - 168; Viruses - 0; Other Eukaryotes - 286 (source: NCBI BLink). & (gnl|cdd|37476 : 178.0) no description available & (reliability: 410.0) & (original description: Putative nudC, Description = Nuclear movement protein nudC, PFAM = PF04969)' T '31.1' 'cell.organisation' 'niben044scf00015425ctg023_3566-6862' '(at1g62040 : 192.0) autophagy 8c (ATG8C); FUNCTIONS IN: microtubule binding; INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G21980.2). & (gnl|cdd|29162 : 184.0) no description available & (gnl|cdd|36867 : 180.0) no description available & (reliability: 374.0) & (original description: Putative apg8, Description = Autophagy-related protein, PFAM = PF02991)' T '31.1' 'cell.organisation' 'niben044scf00015609ctg007_4748-10298' '(at5g19940 : 252.0) Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); Has 21 Blast hits to 21 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 504.0) & (original description: Putative FBN6, Description = Plastid-lipid associated protein PAP / fibrillin family protein isoform 1, PFAM = PF04755)' T '31.1' 'cell.organisation' 'niben044scf00015613ctg005_805-10758' '(at5g47820 : 461.0) encodes a kinesin-like protein with an N-terminal microtubule binding motor domain. Protein is localized to the periphery of the cytoplasm and mutants in the gene exhibit altered orientation of cellulose microfibrils and reduced mechanical strength of fibers.; FRAGILE FIBER 1 (FRA1); CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT3G50240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30094 : 322.0) no description available & (gnl|cdd|35465 : 281.0) no description available & (p46869|fla10_chlre : 182.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 922.0) & (original description: Putative KI21B, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben044scf00015633ctg005_6637-17410' '(at2g34150 : 236.0) Encodes a member of the SCAR family.These proteins are part of a complex (WAVE) complex.The SCAR subunit activates the ARP2/3 complex which in turn act as a nucleator for actin filaments.; SCAR family protein; BEST Arabidopsis thaliana protein match is: SCAR family protein (TAIR:AT1G29170.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5qna6|scrl2_orysa : 198.0) SCAR-like protein 2 - Oryza sativa (Rice) & (reliability: 472.0) & (original description: Putative DIS3, Description = Protein SCAR2, PFAM = )' T '31.1' 'cell.organisation' 'niben044scf00016248ctg001_3006-14986' '(at3g53000 : 424.0) phloem protein 2-A15 (PP2-A15); FUNCTIONS IN: carbohydrate binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 510 Blast hits to 504 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 510; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 848.0) & (original description: Putative PP2A15, Description = F-box protein PP2-A15, PFAM = PF14299)' T '31.1' 'cell.organisation' 'niben044scf00017299ctg000_1-3643' '(at2g02360 : 153.0) phloem protein 2-B10 (PP2-B10); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G02240.1); Has 572 Blast hits to 558 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 567; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative PP2B2, Description = AtPP2-B2, PFAM = PF14299)' T '31.1' 'cell.organisation' 'niben044scf00017482ctg000_32656-42229' '(at3g58760 : 464.0) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT4G18950.1); Has 165609 Blast hits to 134537 proteins in 4793 species: Archae - 244; Bacteria - 16399; Metazoa - 69591; Fungi - 13531; Plants - 33415; Viruses - 845; Other Eukaryotes - 31584 (source: NCBI BLink). & (gnl|cdd|35413 : 244.0) no description available & (gnl|cdd|87344 : 198.0) no description available & (q6x4a2|cipk1_orysa : 112.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 882.0) & (original description: Putative APK1, Description = Ankyrin-kinase protein, PFAM = PF07714)' T '31.1' 'cell.organisation' 'niben044scf00018590ctg003_1-11204' '(at4g39050 : 1044.0) Kinesin motor family protein; FUNCTIONS IN: microtubule motor activity, zinc ion binding, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Zinc finger, RING-type (InterPro:IPR001841), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: Kinesin motor family protein (TAIR:AT2G21380.1); Has 46191 Blast hits to 32952 proteins in 1570 species: Archae - 362; Bacteria - 3539; Metazoa - 22005; Fungi - 4349; Plants - 4299; Viruses - 335; Other Eukaryotes - 11302 (source: NCBI BLink). & (gnl|cdd|35463 : 464.0) no description available & (gnl|cdd|30096 : 462.0) no description available & (p46869|fla10_chlre : 216.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2088.0) & (original description: Putative KIN7D, Description = Kinesin-like protein KIN-7D, mitochondrial, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben044scf00018726ctg004_1-6398' '(at2g34560 : 388.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G80350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35957 : 323.0) no description available & (gnl|cdd|30812 : 172.0) no description available & (p54774|cdc48_soybn : 145.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 776.0) & (original description: Putative katB, Description = Katanin p60 ATPase-containing subunit A-like 2, PFAM = PF00004)' T '31.1' 'cell.organisation' 'niben044scf00019258ctg000_1-8823' '(at5g48460 : 1011.0) Actin binding Calponin homology (CH) domain-containing protein; FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actinin-type, actin-binding, conserved site (InterPro:IPR001589), Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715); BEST Arabidopsis thaliana protein match is: fimbrin-like protein 2 (TAIR:AT5G35700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35269 : 880.0) no description available & (gnl|cdd|34673 : 238.0) no description available & (reliability: 2022.0) & (original description: Putative FIM5, Description = Fimbrin-5, PFAM = PF00307;PF00307;PF00307;PF00307)' T '31.1' 'cell.organisation' 'niben044scf00020273ctg009_141-3645' '(at3g04710 : 173.0) ankyrin repeat family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Tetratricopeptide-like helical (InterPro:IPR011990), Ankyrin repeat-containing domain (InterPro:IPR020683), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1685) (TAIR:AT3G04700.1). & (reliability: 346.0) & (original description: Putative At3g04710, Description = Carboxylate clamp-tetratricopeptide repeat protein, PFAM = PF12796)' T '31.1' 'cell.organisation' 'niben044scf00020337ctg011_5470-17195' '(at5g65930 : 1635.0) encodes a novel member of the kinesin superfamily of motor proteins. recessive mutations have reduced number of trichome branches.; ZWICHEL (ZWI); CONTAINS InterPro DOMAIN/s: FERM central domain (InterPro:IPR019748), Prismane-like (InterPro:IPR011254), MyTH4 domain (InterPro:IPR000857), Kinesin, motor domain (InterPro:IPR001752), Band 4.1 domain (InterPro:IPR019749), FERM, N-terminal (InterPro:IPR018979), Kinesin, motor region, conserved site (InterPro:IPR019821), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352), FERM domain (InterPro:IPR000299); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Kinesin motor domain (TAIR:AT2G22610.2). & (gnl|cdd|30088 : 448.0) no description available & (gnl|cdd|35460 : 408.0) no description available & (p46869|fla10_chlre : 214.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 3270.0) & (original description: Putative KCBP, Description = Kinesin-like calmodulin-binding protein, PFAM = PF09379;PF00373;PF00225;PF00784)' T '31.1' 'cell.organisation' 'niben044scf00020769ctg015_2389-8163' '(gnl|cdd|72813 : 316.0) no description available & (at1g77580 : 268.0) Plant protein of unknown function (DUF869); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G21810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative FPP, Description = Filament-like plant protein, PFAM = PF05911;PF05911;PF05911;PF05911)' T '31.1' 'cell.organisation' 'niben044scf00020854ctg012_3367-4966' '(at3g53000 : 220.0) phloem protein 2-A15 (PP2-A15); FUNCTIONS IN: carbohydrate binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 510 Blast hits to 504 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 510; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative P2A12, Description = AtPP2-A11, PFAM = PF14299)' T '31.1' 'cell.organisation' 'niben044scf00020854ctg014_1-1893' '(at3g53000 : 165.0) phloem protein 2-A15 (PP2-A15); FUNCTIONS IN: carbohydrate binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 510 Blast hits to 504 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 510; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 330.0) & (original description: Putative PP2A15, Description = AtPP2-A15, PFAM = )' T '31.1' 'cell.organisation' 'niben044scf00020989ctg002_128-12621' '(at3g50390 : 261.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G26490.1); Has 33178 Blast hits to 17374 proteins in 678 species: Archae - 38; Bacteria - 5184; Metazoa - 12049; Fungi - 7688; Plants - 3936; Viruses - 0; Other Eukaryotes - 4283 (source: NCBI BLink). & (gnl|cdd|29257 : 146.0) no description available & (gnl|cdd|35502 : 90.5) no description available & (reliability: 522.0) & (original description: Putative glysoja_017805, Description = Lissencephaly-1 like, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '31.1' 'cell.organisation' 'niben044scf00021942ctg000_1-4027' '(at3g54870 : 102.0) Armadillo-repeat containing kinesin-related protein. Plays a role during transition to root-hair tip growth.Mutants have short, branched root hairs and an excess of endoplasmic microtubles. Phenotype suggests ARK1 plays a role in modulating microtubule depolymerization during root hair tip growth.; MORPHOGENESIS OF ROOT HAIR 2 (MRH2); FUNCTIONS IN: microtubule binding, actin binding, microtubule motor activity; INVOLVED IN: root hair cell tip growth, root hair cell differentiation, regulation of microtubule polymerization or depolymerization; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: armadillo repeat kinesin 3 (TAIR:AT1G12430.1); Has 140801 Blast hits to 75642 proteins in 3085 species: Archae - 1274; Bacteria - 19600; Metazoa - 61665; Fungi - 11208; Plants - 7696; Viruses - 409; Other Eukaryotes - 38949 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative ARK1, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben044scf00022158ctg002_9769-16136' '(at1g18370 : 1312.0) Encodes a kinesin HINKEL. Required for cytokinesis in pollen. Mutant has cytokinesis defects; seedling lethal.; HINKEL (HIK); FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: response to cyclopentenone, cellularization of the embryo sac, gametophyte development, pollen development, cytokinesis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT3G43210.1); Has 14045 Blast hits to 12964 proteins in 525 species: Archae - 35; Bacteria - 375; Metazoa - 6535; Fungi - 1633; Plants - 1984; Viruses - 5; Other Eukaryotes - 3478 (source: NCBI BLink). & (gnl|cdd|35463 : 472.0) no description available & (gnl|cdd|30096 : 418.0) no description available & (p46869|fla10_chlre : 216.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2624.0) & (original description: Putative NACK1, Description = Kinesin-like protein NACK1, PFAM = PF11995;PF00225)' T '31.1' 'cell.organisation' 'niben044scf00022651ctg005_1055-3033' '(at1g43700 : 81.6) Encodes a VirE2-interacting protein. VIP1 mediates nuclear translocation of VirE2 via its amino half, and interacts with histone H2A via it carboxyl half.; VIRE2-interacting protein 1 (VIP1); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to sulfate starvation, sulfate transport, DNA mediated transformation, nuclear import; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT1G06070.1); Has 1450 Blast hits to 1450 proteins in 153 species: Archae - 0; Bacteria - 51; Metazoa - 59; Fungi - 47; Plants - 1254; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative rsg, Description = Putative transcription factor PosF21, PFAM = )' T '31.1' 'cell.organisation' 'niben044scf00024053ctg001_46-8985' '(at2g47500 : 1102.0) P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 4 (TAIR:AT5G27000.1); Has 11938 Blast hits to 11443 proteins in 432 species: Archae - 0; Bacteria - 1; Metazoa - 5987; Fungi - 1397; Plants - 1883; Viruses - 0; Other Eukaryotes - 2670 (source: NCBI BLink). & (gnl|cdd|35460 : 473.0) no description available & (gnl|cdd|30088 : 451.0) no description available & (p46870|klp1_chlre : 201.0) Kinesin-like protein KLP1 - Chlamydomonas reinhardtii & (reliability: 2204.0) & (original description: Putative kch2, Description = Kinesin-related protein, PFAM = PF00307;PF00225)' T '31.1' 'cell.organisation' 'niben044scf00024729ctg002_4808-8044' '(at3g04700 : 145.0) CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT3G04710.3); Has 200 Blast hits to 200 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|71376 : 109.0) no description available & (reliability: 288.0) & (original description: Putative , Description = , PFAM = PF07939)' T '31.1' 'cell.organisation' 'niben044scf00025297ctg003_2091-8770' '(at3g27000 : 740.0) encodes a protein whose sequence is similar to actin-related proteins (ARPs) in other organisms. its transcript level is down regulated by light and is expressed in very low levels in all organs examined.; actin related protein 2 (ARP2); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: in 7 processes; LOCATED IN: Arp2/3 protein complex; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: Actin-like ATPase superfamily protein (TAIR:AT2G42100.1); Has 13000 Blast hits to 12789 proteins in 2576 species: Archae - 4; Bacteria - 10; Metazoa - 5530; Fungi - 3345; Plants - 1585; Viruses - 2; Other Eukaryotes - 2524 (source: NCBI BLink). & (gnl|cdd|35896 : 674.0) no description available & (gnl|cdd|47597 : 459.0) no description available & (p53498|act_chlre : 368.0) Actin - Chlamydomonas reinhardtii & (reliability: 1480.0) & (original description: Putative ARP2, Description = Actin-related protein 2, PFAM = PF00022)' T '31.1' 'cell.organisation' 'niben044scf00025584ctg008_1-7494' '(at5g07740 : 682.0) actin binding; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; EXPRESSED IN: shoot apex, stem; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Tensin phosphatase, C2 domain (InterPro:IPR014020), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 protein (TAIR:AT5G07770.1). & (gnl|cdd|85898 : 151.0) no description available & (gnl|cdd|37135 : 140.0) no description available & (reliability: 1364.0) & (original description: Putative FH12, Description = Formin-like protein, PFAM = PF02181;PF10409)' T '31.1' 'cell.organisation' 'niben044scf00027303ctg002_699-3516' '(at3g09890 : 201.0) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing protein 2 (TAIR:AT4G35450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29261 : 96.7) no description available & (reliability: 402.0) & (original description: Putative Os03g0145800, Description = Os03g0145800 protein, PFAM = PF12796;PF12796)' T '31.1' 'cell.organisation' 'niben044scf00029270ctg004_7558-13206' '(at3g12360 : 675.0) Encodes a protein with an ankyrin motif and transmembrane domains that is involved in salt tolerance. Expressed throughout the plant and localized to the plasma membrane. Loss of function mutations show an increased tolerance to salt based on assaying seedling growth in the presence of salt. In the mutants, induction of genes required for production of reactive oxygen species is reduced suggesting that itn1 promotes ROS production.; INCREASED TOLERANCE TO NACL (ITN1); INVOLVED IN: response to salt stress; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G09550.1); Has 61607 Blast hits to 26705 proteins in 1191 species: Archae - 49; Bacteria - 5778; Metazoa - 28187; Fungi - 6605; Plants - 4929; Viruses - 594; Other Eukaryotes - 15465 (source: NCBI BLink). & (gnl|cdd|35728 : 99.7) no description available & (gnl|cdd|29261 : 94.0) no description available & (reliability: 1220.0) & (original description: Putative At3g12360, Description = Ankyrin repeat-containing protein At3g12360, PFAM = PF12796;PF12796;PF12796;PF13962)' T '31.1' 'cell.organisation' 'niben044scf00030826ctg002_128-17194' '(at1g35720 : 114.0) Encodes a member of the annexin gene family, a diverse, multigene family of calcium-dependent, membrane-binding proteins. The protein was determined to have peroxidase activity. This activity is thought to be dependent on the presence of post-translational modifications (most likely phosphorylation). The protein was shown to be present as a mixture of monomer and homodimer. The homodimerization seems to be dependent on the presence of Ca2+ or H2O2. The dimerization was prevented by the addition of DTT, β-mercaptoethanol and TCEP. Annat1 mRNA is expressed in flowers, roots,leaves and stems and is most abundant in stems. mRNA levels are increased in response to oxidative stress. Developmental expression patterns suggest a role in Golgi-mediated polysaccharide secretion.; annexin 1 (ANNAT1); FUNCTIONS IN: in 7 functions; INVOLVED IN: in 8 processes; LOCATED IN: in 10 components; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464), Annexin, type plant (InterPro:IPR009118); BEST Arabidopsis thaliana protein match is: annexin 2 (TAIR:AT5G65020.1); Has 3809 Blast hits to 2217 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 2893; Fungi - 160; Plants - 482; Viruses - 0; Other Eukaryotes - 274 (source: NCBI BLink). & (gnl|cdd|36037 : 99.9) no description available & (p51074|anx4_fraan : 86.3) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (reliability: 228.0) & (original description: Putative an34, Description = Annexin, PFAM = PF00191)' T '31.1' 'cell.organisation' 'niben044scf00034386ctg002_142-4683' '(at3g09890 : 195.0) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing protein 2 (TAIR:AT4G35450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29261 : 94.0) no description available & (gnl|cdd|39379 : 80.8) no description available & (reliability: 390.0) & (original description: Putative At3g09890, Description = BRCA1-associated RING domain protein 1, PFAM = PF12796;PF00023)' T '31.1' 'cell.organisation' 'niben044scf00036998ctg000_4158-7413' '(at3g09550 : 340.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G12360.1); Has 55803 Blast hits to 24932 proteins in 1099 species: Archae - 58; Bacteria - 5470; Metazoa - 27318; Fungi - 5824; Plants - 4263; Viruses - 331; Other Eukaryotes - 12539 (source: NCBI BLink). & (gnl|cdd|35729 : 95.1) no description available & (gnl|cdd|29261 : 92.5) no description available & (reliability: 680.0) & (original description: Putative IGN1, Description = Ankyrin repeat-containing protein, PFAM = PF12796;PF12796)' T '31.1' 'cell.organisation' 'niben044scf00038547ctg002_2220-8189' '(at5g66055 : 404.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; ankyrin repeat protein (AKRP); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G40160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29261 : 119.0) no description available & (gnl|cdd|39613 : 97.0) no description available & (reliability: 808.0) & (original description: Putative AKRP, Description = Ankyrin repeat domain-containing protein, chloroplastic, PFAM = PF12796)' T '31.1' 'cell.organisation' 'niben044scf00040129ctg003_9858-15839' '(at2g46910 : 214.0) Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: Plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT4G22240.1); Has 233 Blast hits to 231 proteins in 72 species: Archae - 0; Bacteria - 57; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative FBN8, Description = 26S protease regulatory subunit 8 like A, PFAM = PF04755)' T '31.1' 'cell.organisation' 'niben044scf00041215ctg002_1-3168' '(gnl|cdd|35269 : 439.0) no description available & (at4g26700 : 434.0) fimbrin-like protein; fimbrin 1 (FIM1); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actinin-type, actin-binding, conserved site (InterPro:IPR001589), Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715); BEST Arabidopsis thaliana protein match is: Actin binding Calponin homology (CH) domain-containing protein (TAIR:AT5G55400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 868.0) & (original description: Putative fimD, Description = Plastin-1, PFAM = PF00307)' T '31.1' 'cell.organisation' 'niben044scf00044816ctg002_4432-21553' '(at3g19050 : 1337.0) PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls.; phragmoplast orienting kinesin 2 (POK2); FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: cytokinesis; EXPRESSED IN: root vascular system, primary root tip, lateral root primordium; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast orienting kinesin 1 (TAIR:AT3G17360.1); Has 204267 Blast hits to 80386 proteins in 3219 species: Archae - 3327; Bacteria - 35963; Metazoa - 90351; Fungi - 17822; Plants - 12667; Viruses - 746; Other Eukaryotes - 43391 (source: NCBI BLink). & (gnl|cdd|30095 : 484.0) no description available & (gnl|cdd|39481 : 353.0) no description available & (p46869|fla10_chlre : 246.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2674.0) & (original description: Putative kif15, Description = Kinesin-like protein KIF15, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben044scf00046383ctg000_375-9989' '(at1g63640 : 882.0) P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (TAIR:AT5G41310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35460 : 492.0) no description available & (gnl|cdd|30088 : 416.0) no description available & (p46869|fla10_chlre : 191.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1764.0) & (original description: Putative predicted gene, Description = Putative kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben044scf00049941ctg005_683-3226' '(at5g65460 : 149.0) Kinesin that binds cyclin-dependent kinase CDKA;1 as homodimer or as heterodimer with KCA1; kinesin like protein for actin based chloroplast movement 2 (KAC2); FUNCTIONS IN: microtubule binding, protein binding, microtubule motor activity; INVOLVED IN: chloroplast avoidance movement, chloroplast accumulation movement; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin like protein for actin based chloroplast movement 1 (TAIR:AT5G10470.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative KAC1, Description = Geminivirus Rep-interacting motor protein, PFAM = )' T '31.1' 'cell.organisation' 'niben044scf00050092ctg004_1-10796' '(o23826|k125_tobac : 1716.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (at2g36200 : 1215.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28620.1). & (gnl|cdd|35464 : 924.0) no description available & (gnl|cdd|30086 : 557.0) no description available & (reliability: 2430.0) & (original description: Putative KIN5C, Description = Kinesin-like protein KIN-5C, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben044scf00051222ctg001_1815-15440' '(at5g07740 : 679.0) actin binding; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; EXPRESSED IN: shoot apex, stem; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Tensin phosphatase, C2 domain (InterPro:IPR014020), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 protein (TAIR:AT5G07770.1). & (gnl|cdd|85898 : 394.0) no description available & (gnl|cdd|37135 : 291.0) no description available & (reliability: 1358.0) & (original description: Putative PGSC0003DMG400024560, Description = Formin-like protein, PFAM = PF10409;PF02181)' T '31.1' 'cell.organisation' 'niben044scf00051434ctg004_1-8577' '(at2g31820 : 369.0) Ankyrin repeat family protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT1G05640.1); Has 69909 Blast hits to 28585 proteins in 1153 species: Archae - 97; Bacteria - 6878; Metazoa - 33005; Fungi - 7349; Plants - 5597; Viruses - 621; Other Eukaryotes - 16362 (source: NCBI BLink). & (gnl|cdd|29261 : 97.5) no description available & (gnl|cdd|35730 : 95.8) no description available & (reliability: 738.0) & (original description: Putative IGN1, Description = Ankyrin repeat-containing protein, PFAM = PF12796;PF12796;PF12796)' T '31.1' 'cell.organisation' 'niben044scf00052233ctg000_157-5674' '(gnl|cdd|36037 : 180.0) no description available & (at5g12380 : 100.0) annexin 8 (ANNAT8); FUNCTIONS IN: calcium-dependent phospholipid binding, calcium ion binding; INVOLVED IN: response to water deprivation, response to salt stress, response to cold, response to heat; EXPRESSED IN: embryo, pedicel, synergid; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464), Annexin, type plant (InterPro:IPR009118); BEST Arabidopsis thaliana protein match is: annexin 7 (TAIR:AT5G10230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p51074|anx4_fraan : 92.0) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (reliability: 200.0) & (original description: Putative Ann3, Description = Annexin, PFAM = PF00191;PF00191;PF00191)' T '31.1' 'cell.organisation' 'niben044scf00054420ctg000_7742-11848' '(at1g62050 : 608.0) Ankyrin repeat family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Protein of unknown function DUF3424 (InterPro:IPR021832), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT1G11740.1); Has 1256 Blast hits to 984 proteins in 147 species: Archae - 0; Bacteria - 27; Metazoa - 615; Fungi - 59; Plants - 389; Viruses - 2; Other Eukaryotes - 164 (source: NCBI BLink). & (gnl|cdd|35742 : 455.0) no description available & (reliability: 1216.0) & (original description: Putative BnaA03g59780D, Description = BnaA03g59780D protein, PFAM = PF12796;PF11904)' T '31.1' 'cell.organisation' 'niben044scf00054918ctg002_52998-54577' '(at5g56180 : 160.0) encodes a protein whose sequence is similar to actin-related proteins (ARPs) in other organisms. Member of nuclear ARP family of genes.; actin-related protein 8 (ARP8); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: actin 9 (TAIR:AT2G42090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative ARP8, Description = Actin-related protein 8, PFAM = PF00022)' T '31.1' 'cell.organisation' 'niben044scf00054918ctg003_1-7734' '(at5g56180 : 496.0) encodes a protein whose sequence is similar to actin-related proteins (ARPs) in other organisms. Member of nuclear ARP family of genes.; actin-related protein 8 (ARP8); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: actin 9 (TAIR:AT2G42090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|28896 : 114.0) no description available & (gnl|cdd|35895 : 112.0) no description available & (reliability: 992.0) & (original description: Putative Os04g0667700, Description = Os04g0667700 protein, PFAM = PF00022;PF00646)' T '31.1' 'cell.organisation' 'niben044scf00055125ctg000_10386-19899' '(at3g45850 : 1333.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28620.1). & (gnl|cdd|35464 : 1007.0) no description available & (o23826|k125_tobac : 779.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (gnl|cdd|30086 : 532.0) no description available & (reliability: 2666.0) & (original description: Putative KIN5D, Description = Kinesin-like protein KIN-5D, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben044scf00058684ctg001_1-6479' '(at2g26210 : 163.0) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110). & (reliability: 326.0) & (original description: Putative Sb02g039390, Description = Putative uncharacterized protein Sb02g039390, PFAM = PF13857;PF01363)' T '31.1' 'cell.organisation' 'niben044scf00059429ctg001_326-3507' '(at5g09810 : 602.0) Member of Actin gene family.Mutants are defective in germination and root growth.; actin 7 (ACT7); FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, nucleolus, cell wall, cytoskeleton, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15241 Blast hits to 14839 proteins in 3047 species: Archae - 8; Bacteria - 21; Metazoa - 5732; Fungi - 5247; Plants - 1603; Viruses - 2; Other Eukaryotes - 2628 (source: NCBI BLink). & (p30164|act1_pea : 600.0) Actin-1 - Pisum sativum (Garden pea) & (gnl|cdd|35895 : 522.0) no description available & (gnl|cdd|28896 : 478.0) no description available & (reliability: 1092.0) & (original description: Putative act, Description = Actin, PFAM = PF00022)' T '31.1' 'cell.organisation' 'niben101ctg13864_495-2224' '(at2g22640 : 120.0) Component of the WAVE protein complex which act as activators of ARP2/3 complex involved in actin nucleation. Required for trichome morphogenesis. Required for accumulation of SCAR1 protein in vivo. Selectively stabilizes SCAR2.; BRICK1 (BRK1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8rw98|brk1_maize : 114.0) Protein BRICK1 - Zea mays (Maize) & (reliability: 240.0) & (original description: Putative BRK1, Description = Protein BRICK 1, PFAM = )' T '31.1' 'cell.organisation' 'niben101ctg14866_1-3038' '(at1g08790 : 169.0) Protein of unknown function (DUF1685); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1685) (TAIR:AT5G28690.1); Has 235 Blast hits to 235 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 234; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|71376 : 111.0) no description available & (reliability: 318.0) & (original description: Putative , Description = , PFAM = PF07939)' T '31.1' 'cell.organisation' 'niben101ctg15750_2922-4986' '(p13362|act1_orysa : 163.0) Actin-1 - Oryza sativa (Rice) & (at3g18780 : 162.0) Encodes an actin that is constitutively expressed in vegetative structures but not pollen. ACT2 is involved in tip growth of root hairs.; actin 2 (ACT2); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: in 7 processes; LOCATED IN: nucleus, membrane, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 8 (TAIR:AT1G49240.1); Has 15142 Blast hits to 14749 proteins in 3039 species: Archae - 6; Bacteria - 12; Metazoa - 5705; Fungi - 5217; Plants - 1599; Viruses - 2; Other Eukaryotes - 2601 (source: NCBI BLink). & (gnl|cdd|35895 : 149.0) no description available & (gnl|cdd|84448 : 142.0) no description available & (reliability: 306.0) & (original description: Putative act, Description = Actin, PFAM = PF00022)' T '31.1' 'cell.organisation' 'niben101ctg16222_1438-7692' '(at3g18670 : 127.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G04700.1); Has 4772 Blast hits to 3121 proteins in 218 species: Archae - 7; Bacteria - 222; Metazoa - 2187; Fungi - 197; Plants - 1396; Viruses - 2; Other Eukaryotes - 761 (source: NCBI BLink). & (gnl|cdd|29261 : 80.5) no description available & (reliability: 254.0) & (original description: Putative SDM1_28t00016, Description = Putative ankyrin repeat containing protein, identical, PFAM = PF12796;PF13962)' T '31.1' 'cell.organisation' 'niben101ctg16325_3593-9538' '(at1g18550 : 744.0) ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G49650.1); Has 10638 Blast hits to 10129 proteins in 307 species: Archae - 0; Bacteria - 6; Metazoa - 4775; Fungi - 1386; Plants - 1857; Viruses - 0; Other Eukaryotes - 2614 (source: NCBI BLink). & (gnl|cdd|30092 : 459.0) no description available & (gnl|cdd|35463 : 374.0) no description available & (p46869|fla10_chlre : 202.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1488.0) & (original description: Putative kif19, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf00024_175700-180405' '(at5g62630 : 582.0) hipl2 protein precursor (HIPL2); FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Soluble quinoprotein glucose/sorbosone dehydrogenase (InterPro:IPR011041), Folate receptor, conserved region (InterPro:IPR018143), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: catalytics (TAIR:AT1G74790.1); Has 3498 Blast hits to 3492 proteins in 823 species: Archae - 55; Bacteria - 1934; Metazoa - 143; Fungi - 4; Plants - 281; Viruses - 0; Other Eukaryotes - 1081 (source: NCBI BLink). & (reliability: 1146.0) & (original description: Putative hipl1, Description = Hedgehog-interacting protein 1, PFAM = PF07995)' T '31.1' 'cell.organisation' 'niben101scf00051_498957-504937' '(gnl|cdd|36867 : 186.0) no description available & (gnl|cdd|29162 : 185.0) no description available & (at1g62040 : 184.0) autophagy 8c (ATG8C); FUNCTIONS IN: microtubule binding; INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G21980.2). & (reliability: 354.0) & (original description: Putative ATG8C, Description = Autophagy-related protein 8C, PFAM = PF02991)' T '31.1' 'cell.organisation' 'niben101scf00063_412746-436565' '(at5g07740 : 686.0) actin binding; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; EXPRESSED IN: shoot apex, stem; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Tensin phosphatase, C2 domain (InterPro:IPR014020), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 protein (TAIR:AT5G07770.1). & (gnl|cdd|85898 : 370.0) no description available & (gnl|cdd|37133 : 311.0) no description available & (reliability: 1372.0) & (original description: Putative FH19, Description = Formin-like protein 19, PFAM = PF10409;PF02181)' T '31.1' 'cell.organisation' 'niben101scf00069_364941-375316' '(at3g49650 : 860.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT1G18550.1); Has 11521 Blast hits to 10970 proteins in 399 species: Archae - 16; Bacteria - 121; Metazoa - 4988; Fungi - 1461; Plants - 1855; Viruses - 76; Other Eukaryotes - 3004 (source: NCBI BLink). & (gnl|cdd|30092 : 460.0) no description available & (gnl|cdd|35463 : 395.0) no description available & (p46869|fla10_chlre : 211.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1720.0) & (original description: Putative kif19, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf00085_481111-494925' '(q93yi9|prof_capan : 248.0) Profilin (Minor food allergen Cap a 2) - Capsicum annuum (Bell pepper) & (at5g56600 : 221.0) Encodes profilin3, a low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton. Originally known as profilin5, and later named profilin3. Expressed in vegetative organs.; profilin 3 (PRF3); FUNCTIONS IN: actin binding; INVOLVED IN: cytoskeleton organization, actin cytoskeleton organization; LOCATED IN: nucleus, actin cytoskeleton, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Profilin/allergen (InterPro:IPR002097), Profilin, plant (InterPro:IPR005455); BEST Arabidopsis thaliana protein match is: profilin 1 (TAIR:AT2G19760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36966 : 167.0) no description available & (gnl|cdd|84632 : 157.0) no description available & (reliability: 442.0) & (original description: Putative pf1, Description = Profilin, PFAM = PF00235)' T '31.1' 'cell.organisation' 'niben101scf00090_165794-170688' '(gnl|cdd|36037 : 370.0) no description available & (at1g68090 : 362.0) Encodes a calcium-binding protein annexin (AnnAt5).; annexin 5 (ANN5); FUNCTIONS IN: calcium-dependent phospholipid binding, calcium ion binding; INVOLVED IN: response to red or far red light, response to water deprivation, response to salt stress, response to cold, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464); BEST Arabidopsis thaliana protein match is: annexin 7 (TAIR:AT5G10230.1); Has 4912 Blast hits to 2269 proteins in 210 species: Archae - 0; Bacteria - 0; Metazoa - 3806; Fungi - 262; Plants - 507; Viruses - 0; Other Eukaryotes - 337 (source: NCBI BLink). & (p51074|anx4_fraan : 212.0) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (gnl|cdd|79507 : 89.0) no description available & (reliability: 724.0) & (original description: Putative ANN5, Description = Annexin D5, PFAM = PF00191;PF00191;PF00191;PF00191)' T '31.1' 'cell.organisation' 'niben101scf00109_576676-585749' '(at5g14230 : 861.0) CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink). & (gnl|cdd|39379 : 116.0) no description available & (gnl|cdd|29261 : 87.8) no description available & (reliability: 1722.0) & (original description: Putative BnaC03g06320D, Description = BnaC03g06320D protein, PFAM = PF12796;PF12796;PF12796)' T '31.1' 'cell.organisation' 'niben101scf00168_714511-719692' '(at2g31820 : 642.0) Ankyrin repeat family protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT1G05640.1); Has 69909 Blast hits to 28585 proteins in 1153 species: Archae - 97; Bacteria - 6878; Metazoa - 33005; Fungi - 7349; Plants - 5597; Viruses - 621; Other Eukaryotes - 16362 (source: NCBI BLink). & (gnl|cdd|35728 : 107.0) no description available & (gnl|cdd|29261 : 99.4) no description available & (reliability: 1284.0) & (original description: Putative At5g02620, Description = Ankyrin repeat-containing protein At5g02620, PFAM = PF13962;PF12796;PF12796;PF12796)' T '31.1' 'cell.organisation' 'niben101scf00260_102561-106138' '(at1g35720 : 382.0) Encodes a member of the annexin gene family, a diverse, multigene family of calcium-dependent, membrane-binding proteins. The protein was determined to have peroxidase activity. This activity is thought to be dependent on the presence of post-translational modifications (most likely phosphorylation). The protein was shown to be present as a mixture of monomer and homodimer. The homodimerization seems to be dependent on the presence of Ca2+ or H2O2. The dimerization was prevented by the addition of DTT, β-mercaptoethanol and TCEP. Annat1 mRNA is expressed in flowers, roots,leaves and stems and is most abundant in stems. mRNA levels are increased in response to oxidative stress. Developmental expression patterns suggest a role in Golgi-mediated polysaccharide secretion.; annexin 1 (ANNAT1); FUNCTIONS IN: in 7 functions; INVOLVED IN: in 8 processes; LOCATED IN: in 10 components; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464), Annexin, type plant (InterPro:IPR009118); BEST Arabidopsis thaliana protein match is: annexin 2 (TAIR:AT5G65020.1); Has 3809 Blast hits to 2217 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 2893; Fungi - 160; Plants - 482; Viruses - 0; Other Eukaryotes - 274 (source: NCBI BLink). & (gnl|cdd|36037 : 329.0) no description available & (p51074|anx4_fraan : 286.0) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (reliability: 764.0) & (original description: Putative an34, Description = Annexin, PFAM = PF00191;PF00191;PF00191;PF00191)' T '31.1' 'cell.organisation' 'niben101scf00270_1558249-1563290' '(at3g18670 : 119.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G04700.1); Has 4772 Blast hits to 3121 proteins in 218 species: Archae - 7; Bacteria - 222; Metazoa - 2187; Fungi - 197; Plants - 1396; Viruses - 2; Other Eukaryotes - 761 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative PGSC0003DMG400025386, Description = Putative ankyrin repeat containing protein, identical, PFAM = PF13962;PF12796)' T '31.1' 'cell.organisation' 'niben101scf00293_284377-287594' '(at3g51930 : 479.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G26490.1); Has 18652 Blast hits to 11636 proteins in 586 species: Archae - 30; Bacteria - 3325; Metazoa - 6348; Fungi - 4425; Plants - 2130; Viruses - 0; Other Eukaryotes - 2394 (source: NCBI BLink). & (gnl|cdd|29257 : 126.0) no description available & (gnl|cdd|35495 : 87.4) no description available & (reliability: 958.0) & (original description: Putative FGENESH2, Description = Transducin family protein / WD-40 repeat family protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '31.1' 'cell.organisation' 'niben101scf00294_253332-259774' '(at2g37080 : 289.0) ROP interactive partner 3 (RIP3); LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: ROP interactive partner 4 (TAIR:AT3G53350.1); Has 147635 Blast hits to 77239 proteins in 3391 species: Archae - 1987; Bacteria - 30902; Metazoa - 62424; Fungi - 12574; Plants - 8109; Viruses - 683; Other Eukaryotes - 30956 (source: NCBI BLink). & (reliability: 578.0) & (original description: Putative p70, Description = P70 protein, PFAM = )' T '31.1' 'cell.organisation' 'niben101scf00305_178406-182297' '(at2g18280 : 483.0) Member of TLP family; tubby like protein 2 (TLP2); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 3 (TAIR:AT2G47900.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37713 : 410.0) no description available & (gnl|cdd|85281 : 292.0) no description available & (reliability: 966.0) & (original description: Putative TULP5, Description = Tubby-like F-box protein 5, PFAM = PF01167;PF00646)' T '31.1' 'cell.organisation' 'niben101scf00314_222165-234064' '(at3g23670 : 1143.0) Microtubule motor kinesin PAKRP1L/Kinesin-12B. Together with PAKRP1/Kinesin-12A, serve as linkers of the plus ends of antiparallel microtubules in the phragmoplast.; KINESIN-12B; FUNCTIONS IN: microtubule motor activity, plus-end-directed microtubule motor activity; INVOLVED IN: phragmoplast assembly, microgametogenesis; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin-related protein (InterPro:IPR010544), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast-associated kinesin-related protein 1 (TAIR:AT4G14150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70035 : 552.0) no description available & (gnl|cdd|39481 : 376.0) no description available & (p46869|fla10_chlre : 238.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2286.0) & (original description: Putative KIN12B, Description = Kinesin-like protein KIN12B, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf00317_652563-661152' '(at3g03490 : 239.0) Encodes one of two PEX19 peroxin isoforms. It is predominantly cytosolic and forms dimers.; peroxin 19-1 (PEX19-1); CONTAINS InterPro DOMAIN/s: Pex19 protein (InterPro:IPR006708); BEST Arabidopsis thaliana protein match is: peroxin 19-2 (TAIR:AT5G17550.1); Has 637 Blast hits to 625 proteins in 250 species: Archae - 3; Bacteria - 161; Metazoa - 169; Fungi - 149; Plants - 43; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|38343 : 161.0) no description available & (gnl|cdd|68195 : 136.0) no description available & (reliability: 478.0) & (original description: Putative PEX19-1, Description = Peroxisome biogenesis protein 19-1, PFAM = PF04614)' T '31.1' 'cell.organisation' 'niben101scf00332_910863-916464' '(at5g17900 : 341.0) microfibrillar-associated protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: extracellular region; CONTAINS InterPro DOMAIN/s: Micro-fibrillar-associated 1, C-terminal (InterPro:IPR009730); BEST Arabidopsis thaliana protein match is: microfibrillar-associated protein-related (TAIR:AT4G08580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36639 : 260.0) no description available & (gnl|cdd|70456 : 200.0) no description available & (reliability: 670.0) & (original description: Putative Mfap1, Description = Microfibrillar-associated protein 1, PFAM = PF06991)' T '31.1' 'cell.organisation' 'niben101scf00337_362828-368841' '(at5g08120 : 178.0) Microtubule-associated and viral movement protein binding protein. Negatively regulates KN1 association to plasmodesmata and, consequently, cell-to-cell transport. Involved in the alignment of cortical microtubules, the patterning of stomata and in restricting tobamoviral infections.; movement protein binding protein 2C (MPB2C); Has 5726 Blast hits to 4344 proteins in 670 species: Archae - 77; Bacteria - 646; Metazoa - 3260; Fungi - 443; Plants - 256; Viruses - 12; Other Eukaryotes - 1032 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative MPB2Cb, Description = MPB2C-like protein, PFAM = )' T '31.1' 'cell.organisation' 'niben101scf00345_231195-251783' '(at5g37590 : 479.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1); Has 6183 Blast hits to 2629 proteins in 327 species: Archae - 94; Bacteria - 1884; Metazoa - 2136; Fungi - 1054; Plants - 282; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (gnl|cdd|37051 : 133.0) no description available & (reliability: 958.0) & (original description: Putative PGSC0003DMG400013236, Description = OSJNBa0009K15.24 protein, PFAM = PF13424;PF13424;PF13424)' T '31.1' 'cell.organisation' 'niben101scf00367_209377-215493' '(at4g14330 : 664.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: phragmoplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 1 (TAIR:AT4G21270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35464 : 376.0) no description available & (gnl|cdd|30083 : 247.0) no description available & (o23826|k125_tobac : 114.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 1328.0) & (original description: Putative PAKRP2, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf00367_209568-215475' '(at4g14330 : 668.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: phragmoplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 1 (TAIR:AT4G21270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35464 : 376.0) no description available & (gnl|cdd|30083 : 249.0) no description available & (o23826|k125_tobac : 112.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 1336.0) & (original description: Putative BnaC04g28810D, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf00367_272671-278452' '(at3g23400 : 288.0) fibrillin 4 (FIB4); FUNCTIONS IN: structural molecule activity; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: Plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT3G26070.1); Has 367 Blast hits to 365 proteins in 76 species: Archae - 0; Bacteria - 87; Metazoa - 0; Fungi - 0; Plants - 273; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|68332 : 149.0) no description available & (reliability: 576.0) & (original description: Putative HrBP1, Description = Harpin binding protein 1, PFAM = PF04755)' T '31.1' 'cell.organisation' 'niben101scf00369_2084204-2087441' '(at1g09155 : 262.0) phloem protein 2-B15 (PP2-B15); FUNCTIONS IN: carbohydrate binding; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: phloem protein 2-B13 (TAIR:AT1G56240.1); Has 535 Blast hits to 526 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 535; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 524.0) & (original description: Putative PP2B15, Description = F-box protein PP2-B15, PFAM = PF14299;PF00646)' T '31.1' 'cell.organisation' 'niben101scf00369_2119143-2122034' '(at1g09155 : 218.0) phloem protein 2-B15 (PP2-B15); FUNCTIONS IN: carbohydrate binding; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: phloem protein 2-B13 (TAIR:AT1G56240.1); Has 535 Blast hits to 526 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 535; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative VBF, Description = AtPP2-B10, PFAM = PF12937;PF14299)' T '31.1' 'cell.organisation' 'niben101scf00369_2128193-2131221' '(at1g09155 : 252.0) phloem protein 2-B15 (PP2-B15); FUNCTIONS IN: carbohydrate binding; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: phloem protein 2-B13 (TAIR:AT1G56240.1); Has 535 Blast hits to 526 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 535; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 504.0) & (original description: Putative PP2B15, Description = F-box protein PP2-B15, PFAM = PF14299;PF00646)' T '31.1' 'cell.organisation' 'niben101scf00409_492654-495793' '(at5g64920 : 175.0) Encodes a RING-H2 protein that interacts with the RING finger domain of COP1. CIP8 exhibits a strong interaction with the E2 ubiquitin conjugating enzyme AtUBC8 through its N-terminal domain and promotes ubiquitination in an E2-dependent fashion in vitro. It is possible that the AtUBC8-CIP8 module might interact with COP1 in vivo, thereby participating in proteasome-mediated degradation of HY5.; COP1-interacting protein 8 (CIP8); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G01980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative CIP8, Description = E3 ubiquitin-protein ligase CIP8, PFAM = PF14369;PF13639)' T '31.1' 'cell.organisation' 'niben101scf00428_835121-841715' '(at1g18370 : 1307.0) Encodes a kinesin HINKEL. Required for cytokinesis in pollen. Mutant has cytokinesis defects; seedling lethal.; HINKEL (HIK); FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: response to cyclopentenone, cellularization of the embryo sac, gametophyte development, pollen development, cytokinesis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT3G43210.1); Has 14045 Blast hits to 12964 proteins in 525 species: Archae - 35; Bacteria - 375; Metazoa - 6535; Fungi - 1633; Plants - 1984; Viruses - 5; Other Eukaryotes - 3478 (source: NCBI BLink). & (gnl|cdd|35463 : 472.0) no description available & (gnl|cdd|30096 : 418.0) no description available & (p46869|fla10_chlre : 216.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2614.0) & (original description: Putative NACK1, Description = Kinesin-like protein NACK1, PFAM = PF11995;PF00225)' T '31.1' 'cell.organisation' 'niben101scf00444_189966-194411' '(at2g28840 : 605.0) XB3 ortholog 1 in Arabidopsis thaliana (XBAT31); FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 3 in Arabidopsis thaliana (TAIR:AT5G07270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29261 : 104.0) no description available & (gnl|cdd|39379 : 91.9) no description available & (reliability: 1210.0) & (original description: Putative XBAT31, Description = Putative E3 ubiquitin-protein ligase XBAT31, PFAM = PF13606;PF12796;PF12796)' T '31.1' 'cell.organisation' 'niben101scf00457_495270-499460' '(at3g09890 : 197.0) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing protein 2 (TAIR:AT4G35450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29261 : 95.5) no description available & (gnl|cdd|39379 : 81.2) no description available & (reliability: 394.0) & (original description: Putative Os03g0145800, Description = Os03g0145800 protein, PFAM = PF00023;PF12796)' T '31.1' 'cell.organisation' 'niben101scf00457_495439-503699' '(at3g09890 : 212.0) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing protein 2 (TAIR:AT4G35450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29261 : 95.9) no description available & (gnl|cdd|39379 : 88.9) no description available & (reliability: 424.0) & (original description: Putative At3g09890, Description = Ankyrin repeat-containing protein, PFAM = PF00023;PF12796)' T '31.1' 'cell.organisation' 'niben101scf00466_85504-94443' '(at2g21300 : 876.0) ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT4G38950.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35463 : 455.0) no description available & (gnl|cdd|30096 : 402.0) no description available & (p46869|fla10_chlre : 222.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1752.0) & (original description: Putative KIN7F, Description = Kinesin-like protein KIN-7F, PFAM = PF00225;PF11995)' T '31.1' 'cell.organisation' 'niben101scf00488_688884-691914' '(at5g20110 : 129.0) Dynein light chain type 1 family protein; FUNCTIONS IN: microtubule motor activity; INVOLVED IN: microtubule-based process; LOCATED IN: microtubule associated complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Dynein light chain, type 1/2 (InterPro:IPR001372); BEST Arabidopsis thaliana protein match is: Dynein light chain type 1 family protein (TAIR:AT1G23220.1); Has 1201 Blast hits to 1201 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 594; Fungi - 104; Plants - 259; Viruses - 0; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|38640 : 99.6) no description available & (reliability: 258.0) & (original description: Putative vfPIP, Description = Dynein light chain, PFAM = PF01221)' T '31.1' 'cell.organisation' 'niben101scf00501_266478-274394' '(at3g23280 : 415.0) XB3 ortholog 5 in Arabidopsis thaliana (XBAT35); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 4 in Arabidopsis thaliana (TAIR:AT4G14365.1); Has 26382 Blast hits to 15025 proteins in 882 species: Archae - 61; Bacteria - 2221; Metazoa - 14003; Fungi - 1495; Plants - 1186; Viruses - 392; Other Eukaryotes - 7024 (source: NCBI BLink). & (gnl|cdd|29261 : 90.5) no description available & (reliability: 830.0) & (original description: Putative XBAT35, Description = Putative E3 ubiquitin-protein ligase XBAT35, PFAM = PF13920;PF13637;PF00023)' T '31.1' 'cell.organisation' 'niben101scf00536_443921-456777' '(at1g04780 : 808.0) Ankyrin repeat family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Protein of unknown function DUF3424 (InterPro:IPR021832), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G24210.1); Has 1138 Blast hits to 827 proteins in 107 species: Archae - 2; Bacteria - 12; Metazoa - 639; Fungi - 18; Plants - 352; Viruses - 2; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|35742 : 319.0) no description available & (reliability: 1616.0) & (original description: Putative At1g04780, Description = Ankyrin repeat-containing protein, PFAM = PF11904)' T '31.1' 'cell.organisation' 'niben101scf00551_101016-105070' '(o65812|prof1_hevbr : 212.0) Profilin-1 (Pollen allergen Hev b 8.0101) - Hevea brasiliensis (Para rubber tree) & (at5g56600 : 187.0) Encodes profilin3, a low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton. Originally known as profilin5, and later named profilin3. Expressed in vegetative organs.; profilin 3 (PRF3); FUNCTIONS IN: actin binding; INVOLVED IN: cytoskeleton organization, actin cytoskeleton organization; LOCATED IN: nucleus, actin cytoskeleton, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Profilin/allergen (InterPro:IPR002097), Profilin, plant (InterPro:IPR005455); BEST Arabidopsis thaliana protein match is: profilin 1 (TAIR:AT2G19760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36966 : 166.0) no description available & (gnl|cdd|84632 : 161.0) no description available & (reliability: 374.0) & (original description: Putative pf1, Description = Profilin, PFAM = PF00235)' T '31.1' 'cell.organisation' 'niben101scf00592_39293-43037' '(at2g18280 : 461.0) Member of TLP family; tubby like protein 2 (TLP2); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 3 (TAIR:AT2G47900.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37713 : 410.0) no description available & (gnl|cdd|85281 : 284.0) no description available & (reliability: 922.0) & (original description: Putative TULP5, Description = Tubby-like F-box protein 5, PFAM = PF00646;PF01167)' T '31.1' 'cell.organisation' 'niben101scf00635_55518-61281' '(at2g03430 : 292.0) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat protein (TAIR:AT5G66055.1); Has 130068 Blast hits to 38689 proteins in 1585 species: Archae - 162; Bacteria - 14649; Metazoa - 59864; Fungi - 13189; Plants - 7735; Viruses - 2061; Other Eukaryotes - 32408 (source: NCBI BLink). & (gnl|cdd|39613 : 211.0) no description available & (gnl|cdd|29261 : 136.0) no description available & (q8vyx2|akt1_orysa : 84.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 584.0) & (original description: Putative BnaA09g19310D, Description = BnaA09g19310D protein, PFAM = PF12796;PF13637)' T '31.1' 'cell.organisation' 'niben101scf00646_657889-662664' '(at1g76900 : 583.0) Member of TLP family; tubby like protein 1 (TLP1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 10 (TAIR:AT1G25280.1); Has 1520 Blast hits to 1117 proteins in 153 species: Archae - 0; Bacteria - 107; Metazoa - 432; Fungi - 112; Plants - 488; Viruses - 57; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|37713 : 450.0) no description available & (gnl|cdd|85281 : 348.0) no description available & (reliability: 1166.0) & (original description: Putative TULP8, Description = Tubby-like F-box protein 8, PFAM = PF01167;PF00646)' T '31.1' 'cell.organisation' 'niben101scf00646_702091-705507' '(p30173|act13_soltu : 706.0) Actin-101 - Solanum tuberosum (Potato) & (at3g12110 : 692.0) Encodes an actin that is expressed predominantly during reproductive development.; actin-11 (ACT11); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: response to cyclopentenone, actin cytoskeleton organization; LOCATED IN: mitochondrion, cytoskeleton, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15186 Blast hits to 14782 proteins in 3039 species: Archae - 6; Bacteria - 12; Metazoa - 5717; Fungi - 5233; Plants - 1598; Viruses - 2; Other Eukaryotes - 2618 (source: NCBI BLink). & (gnl|cdd|35895 : 584.0) no description available & (gnl|cdd|28896 : 539.0) no description available & (reliability: 1256.0) & (original description: Putative act, Description = Actin, PFAM = PF00022)' T '31.1' 'cell.organisation' 'niben101scf00675_314970-319959' '(at1g68090 : 360.0) Encodes a calcium-binding protein annexin (AnnAt5).; annexin 5 (ANN5); FUNCTIONS IN: calcium-dependent phospholipid binding, calcium ion binding; INVOLVED IN: response to red or far red light, response to water deprivation, response to salt stress, response to cold, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464); BEST Arabidopsis thaliana protein match is: annexin 7 (TAIR:AT5G10230.1); Has 4912 Blast hits to 2269 proteins in 210 species: Archae - 0; Bacteria - 0; Metazoa - 3806; Fungi - 262; Plants - 507; Viruses - 0; Other Eukaryotes - 337 (source: NCBI BLink). & (gnl|cdd|36037 : 359.0) no description available & (p51074|anx4_fraan : 199.0) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (gnl|cdd|79507 : 88.2) no description available & (reliability: 720.0) & (original description: Putative ANXA13, Description = Annexin A13, PFAM = PF00191;PF00191;PF00191;PF00191)' T '31.1' 'cell.organisation' 'niben101scf00683_313416-322014' '(at3g20150 : 708.0) Kinesin motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin-related protein (InterPro:IPR010544), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast-associated kinesin-related protein, putative (TAIR:AT3G23670.1); Has 35666 Blast hits to 25760 proteins in 1172 species: Archae - 323; Bacteria - 1981; Metazoa - 18692; Fungi - 3316; Plants - 2878; Viruses - 57; Other Eukaryotes - 8419 (source: NCBI BLink). & (gnl|cdd|70035 : 635.0) no description available & (gnl|cdd|39481 : 313.0) no description available & (p46869|fla10_chlre : 187.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1416.0) & (original description: Putative KRP, Description = Kinesin-related protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf00684_90524-108924' '(at2g37420 : 957.0) ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G45850.2); Has 44433 Blast hits to 32365 proteins in 1868 species: Archae - 445; Bacteria - 6202; Metazoa - 19487; Fungi - 4140; Plants - 3247; Viruses - 113; Other Eukaryotes - 10799 (source: NCBI BLink). & (gnl|cdd|35464 : 855.0) no description available & (o23826|k125_tobac : 652.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (gnl|cdd|30086 : 518.0) no description available & (reliability: 1914.0) & (original description: Putative KIN5B, Description = Kinesin-like protein KIN-5B, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf00742_246332-261789' '(at1g11160 : 697.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G61210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35488 : 305.0) no description available & (gnl|cdd|29257 : 214.0) no description available & (p93107|pf20_chlre : 108.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1394.0) & (original description: Putative kat80, Description = Katanin p80 WD40 repeat-containing subunit B1 homolog, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF13925)' T '31.1' 'cell.organisation' 'niben101scf00745_4478-8946' '(o82572|prof1_ricco : 222.0) Profilin-1 - Ricinus communis (Castor bean) & (at5g56600 : 197.0) Encodes profilin3, a low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton. Originally known as profilin5, and later named profilin3. Expressed in vegetative organs.; profilin 3 (PRF3); FUNCTIONS IN: actin binding; INVOLVED IN: cytoskeleton organization, actin cytoskeleton organization; LOCATED IN: nucleus, actin cytoskeleton, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Profilin/allergen (InterPro:IPR002097), Profilin, plant (InterPro:IPR005455); BEST Arabidopsis thaliana protein match is: profilin 1 (TAIR:AT2G19760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36966 : 170.0) no description available & (gnl|cdd|84632 : 157.0) no description available & (reliability: 394.0) & (original description: Putative pf1, Description = Profilin, PFAM = PF00235)' T '31.1' 'cell.organisation' 'niben101scf00812_189647-194118' '(at3g61060 : 324.0) phloem protein 2-A13 (PP2-A13); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 616.0) & (original description: Putative PP2A13, Description = F-box protein PP2-A13, PFAM = PF00646;PF14299)' T '31.1' 'cell.organisation' 'niben101scf00883_469629-491021' '(at4g39050 : 1251.0) Kinesin motor family protein; FUNCTIONS IN: microtubule motor activity, zinc ion binding, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Zinc finger, RING-type (InterPro:IPR001841), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: Kinesin motor family protein (TAIR:AT2G21380.1); Has 46191 Blast hits to 32952 proteins in 1570 species: Archae - 362; Bacteria - 3539; Metazoa - 22005; Fungi - 4349; Plants - 4299; Viruses - 335; Other Eukaryotes - 11302 (source: NCBI BLink). & (gnl|cdd|35463 : 465.0) no description available & (gnl|cdd|30096 : 463.0) no description available & (p46869|fla10_chlre : 222.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2502.0) & (original description: Putative KIN7D, Description = Kinesin-like protein KIN-7D, mitochondrial, PFAM = PF13920;PF00225)' T '31.1' 'cell.organisation' 'niben101scf00883_857775-865368' '(at2g21300 : 857.0) ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT4G38950.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35463 : 455.0) no description available & (gnl|cdd|30096 : 406.0) no description available & (p46869|fla10_chlre : 213.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1714.0) & (original description: Putative KIN7E, Description = Kinesin-like protein KIN-7E, PFAM = PF00225;PF11995)' T '31.1' 'cell.organisation' 'niben101scf00890_91631-95717' '(at2g02360 : 224.0) phloem protein 2-B10 (PP2-B10); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G02240.1); Has 572 Blast hits to 558 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 567; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative PP2B6, Description = Putative F-box protein PP2-B6, PFAM = PF00646;PF14299)' T '31.1' 'cell.organisation' 'niben101scf00998_54233-62984' '(at3g57890 : 800.0) Tubulin binding cofactor C domain-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CARP motif (InterPro:IPR006599), C-CAP/cofactor C-like domain (InterPro:IPR017901), Tubulin binding cofactor C (InterPro:IPR012945); BEST Arabidopsis thaliana protein match is: C-CAP/cofactor C-like domain-containing protein (TAIR:AT2G42230.2). & (gnl|cdd|39617 : 560.0) no description available & (gnl|cdd|87422 : 146.0) no description available & (reliability: 1560.0) & (original description: Putative TBCC, Description = Tublin binding cofactor C, PFAM = PF07986)' T '31.1' 'cell.organisation' 'niben101scf01009_50567-55492' '(at1g07710 : 543.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT5G60070.1); Has 71061 Blast hits to 30444 proteins in 1217 species: Archae - 72; Bacteria - 7320; Metazoa - 31750; Fungi - 7301; Plants - 5738; Viruses - 586; Other Eukaryotes - 18294 (source: NCBI BLink). & (gnl|cdd|35728 : 104.0) no description available & (gnl|cdd|29261 : 102.0) no description available & (reliability: 1086.0) & (original description: Putative At5g02620, Description = Ankyrin repeat-containing protein At5g02620, PFAM = PF12796;PF12796;PF13857;PF13962)' T '31.1' 'cell.organisation' 'niben101scf01013_642612-649041' '(at4g14330 : 708.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: phragmoplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 1 (TAIR:AT4G21270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35464 : 353.0) no description available & (gnl|cdd|47468 : 249.0) no description available & (o23826|k125_tobac : 119.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 1416.0) & (original description: Putative PAKRP2, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf01072_446500-450246' '(at4g10720 : 207.0) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G54620.1); Has 21804 Blast hits to 10802 proteins in 484 species: Archae - 19; Bacteria - 1454; Metazoa - 11942; Fungi - 1177; Plants - 2277; Viruses - 52; Other Eukaryotes - 4883 (source: NCBI BLink). & (gnl|cdd|29261 : 86.3) no description available & (gnl|cdd|39379 : 81.5) no description available & (reliability: 414.0) & (original description: Putative ANK, Description = Ankyrin repeat-containing protein, putative, PFAM = PF12796;PF12796;PF00023;PF13962)' T '31.1' 'cell.organisation' 'niben101scf01072_448898-452408' '(at5g15500 : 217.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G10720.1); Has 18283 Blast hits to 10029 proteins in 436 species: Archae - 21; Bacteria - 1142; Metazoa - 9586; Fungi - 1012; Plants - 1920; Viruses - 51; Other Eukaryotes - 4551 (source: NCBI BLink). & (gnl|cdd|29261 : 80.5) no description available & (reliability: 434.0) & (original description: Putative BnaC03g14470D, Description = BnaC03g14470D protein, PFAM = PF13857;PF13962;PF12796)' T '31.1' 'cell.organisation' 'niben101scf01143_150390-157903' '(at5g08120 : 178.0) Microtubule-associated and viral movement protein binding protein. Negatively regulates KN1 association to plasmodesmata and, consequently, cell-to-cell transport. Involved in the alignment of cortical microtubules, the patterning of stomata and in restricting tobamoviral infections.; movement protein binding protein 2C (MPB2C); Has 5726 Blast hits to 4344 proteins in 670 species: Archae - 77; Bacteria - 646; Metazoa - 3260; Fungi - 443; Plants - 256; Viruses - 12; Other Eukaryotes - 1032 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative MPB2C, Description = Microtubule-associated protein, PFAM = )' T '31.1' 'cell.organisation' 'niben101scf01150_19085-26248' '(at1g43700 : 199.0) Encodes a VirE2-interacting protein. VIP1 mediates nuclear translocation of VirE2 via its amino half, and interacts with histone H2A via it carboxyl half.; VIRE2-interacting protein 1 (VIP1); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to sulfate starvation, sulfate transport, DNA mediated transformation, nuclear import; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT1G06070.1); Has 1450 Blast hits to 1450 proteins in 153 species: Archae - 0; Bacteria - 51; Metazoa - 59; Fungi - 47; Plants - 1254; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (q69il4|rf2a_orysa : 167.0) Transcription factor RF2a - Oryza sativa (Rice) & (reliability: 398.0) & (original description: Putative rsg, Description = BZIP transcriptional activator RSG, PFAM = PF00170)' T '31.1' 'cell.organisation' 'niben101scf01150_176075-179370' '(at3g33520 : 594.0) Encodes ACTIN-RELATED PROTEIN6 (ARP6), a putative component of a chromatin-remodeling complex. Required for both histone acetylation and methylation of the FLC chromatin in Arabidopsis. Along with PIE1 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6). Incorporation of this variant histone into chromatin mediates the ambient temperature response. Located at specific regions of the nuclear periphery. Expression throughout plants shown by in-situ and immunolocalization methods. Mutants show defects in fertility, leaf, flower and inflorescence development and shorter flowering times. ARP6 also is involved in globally controlling developmental responses to ambient temperature.; actin-related protein 6 (ARP6); CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 12358 Blast hits to 12072 proteins in 2463 species: Archae - 0; Bacteria - 4; Metazoa - 5326; Fungi - 3155; Plants - 1501; Viruses - 2; Other Eukaryotes - 2370 (source: NCBI BLink). & (gnl|cdd|28896 : 316.0) no description available & (gnl|cdd|35899 : 313.0) no description available & (p20904|act_volca : 200.0) Actin - Volvox carteri & (reliability: 1188.0) & (original description: Putative act6, Description = Actin related protein 6, PFAM = PF00022)' T '31.1' 'cell.organisation' 'niben101scf01154_1866209-1879287' '(at5g65930 : 1628.0) encodes a novel member of the kinesin superfamily of motor proteins. recessive mutations have reduced number of trichome branches.; ZWICHEL (ZWI); CONTAINS InterPro DOMAIN/s: FERM central domain (InterPro:IPR019748), Prismane-like (InterPro:IPR011254), MyTH4 domain (InterPro:IPR000857), Kinesin, motor domain (InterPro:IPR001752), Band 4.1 domain (InterPro:IPR019749), FERM, N-terminal (InterPro:IPR018979), Kinesin, motor region, conserved site (InterPro:IPR019821), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352), FERM domain (InterPro:IPR000299); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Kinesin motor domain (TAIR:AT2G22610.2). & (gnl|cdd|30088 : 446.0) no description available & (gnl|cdd|35460 : 405.0) no description available & (p46869|fla10_chlre : 211.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 3256.0) & (original description: Putative KCBP, Description = Kinesin-like calmodulin-binding protein, PFAM = PF00784;PF00373;PF00225;PF09379)' T '31.1' 'cell.organisation' 'niben101scf01166_799904-807959' '(gnl|cdd|72813 : 255.0) no description available & (at1g77580 : 212.0) Plant protein of unknown function (DUF869); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G21810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 424.0) & (original description: Putative FPP, Description = Filament-like plant protein, PFAM = PF05911;PF05911;PF05911;PF05911)' T '31.1' 'cell.organisation' 'niben101scf01171_995436-1001131' '(at1g04780 : 664.0) Ankyrin repeat family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Protein of unknown function DUF3424 (InterPro:IPR021832), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G24210.1); Has 1138 Blast hits to 827 proteins in 107 species: Archae - 2; Bacteria - 12; Metazoa - 639; Fungi - 18; Plants - 352; Viruses - 2; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|35742 : 447.0) no description available & (reliability: 1328.0) & (original description: Putative At1g04780, Description = Ankyrin repeat-containing protein, PFAM = PF11904)' T '31.1' 'cell.organisation' 'niben101scf01171_997647-1000915' '(at1g04780 : 514.0) Ankyrin repeat family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Protein of unknown function DUF3424 (InterPro:IPR021832), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G24210.1); Has 1138 Blast hits to 827 proteins in 107 species: Archae - 2; Bacteria - 12; Metazoa - 639; Fungi - 18; Plants - 352; Viruses - 2; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|35742 : 359.0) no description available & (reliability: 1028.0) & (original description: Putative At1g04780, Description = Ankyrin repeat-containing protein, PFAM = PF11904)' T '31.1' 'cell.organisation' 'niben101scf01181_53428-61572' '(at1g48635 : 388.0) peroxin 3 (PEX3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: peroxisome organization; LOCATED IN: mitochondrion, peroxisome, integral to peroxisomal membrane; CONTAINS InterPro DOMAIN/s: Peroxin-3 (InterPro:IPR006966); BEST Arabidopsis thaliana protein match is: peroxin 3-1 (TAIR:AT3G18160.1); Has 293 Blast hits to 293 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 111; Plants - 49; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|39645 : 227.0) no description available & (gnl|cdd|68456 : 107.0) no description available & (reliability: 776.0) & (original description: Putative PEX3, Description = Peroxisome biogenesis protein 3-2, PFAM = PF04882)' T '31.1' 'cell.organisation' 'niben101scf01205_58348-65782' '(at2g21300 : 635.0) ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT4G38950.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35463 : 430.0) no description available & (gnl|cdd|30096 : 408.0) no description available & (p46869|fla10_chlre : 184.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1270.0) & (original description: Putative DBS1, Description = Kinesin-like protein, PFAM = PF00225;PF11995)' T '31.1' 'cell.organisation' 'niben101scf01226_147845-150586' '(at3g10310 : 90.5) P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 4 (TAIR:AT5G27000.1); Has 11194 Blast hits to 10379 proteins in 346 species: Archae - 2; Bacteria - 8; Metazoa - 5167; Fungi - 1411; Plants - 1943; Viruses - 0; Other Eukaryotes - 2663 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative At3g10310, Description = Kinesin-like protein, PFAM = )' T '31.1' 'cell.organisation' 'niben101scf01240_564500-568779' '(at5g20110 : 160.0) Dynein light chain type 1 family protein; FUNCTIONS IN: microtubule motor activity; INVOLVED IN: microtubule-based process; LOCATED IN: microtubule associated complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Dynein light chain, type 1/2 (InterPro:IPR001372); BEST Arabidopsis thaliana protein match is: Dynein light chain type 1 family protein (TAIR:AT1G23220.1); Has 1201 Blast hits to 1201 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 594; Fungi - 104; Plants - 259; Viruses - 0; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|38640 : 109.0) no description available & (gnl|cdd|85315 : 83.8) no description available & (reliability: 320.0) & (original description: Putative vfPIP, Description = Dynein light chain type 1 family protein, PFAM = PF01221)' T '31.1' 'cell.organisation' 'niben101scf01240_564542-567021' '(at5g20110 : 80.5) Dynein light chain type 1 family protein; FUNCTIONS IN: microtubule motor activity; INVOLVED IN: microtubule-based process; LOCATED IN: microtubule associated complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Dynein light chain, type 1/2 (InterPro:IPR001372); BEST Arabidopsis thaliana protein match is: Dynein light chain type 1 family protein (TAIR:AT1G23220.1); Has 1201 Blast hits to 1201 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 594; Fungi - 104; Plants - 259; Viruses - 0; Other Eukaryotes - 244 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative At5g20110, Description = Axonemal dynein light chain, putative, PFAM = )' T '31.1' 'cell.organisation' 'niben101scf01259_487368-504715' '(at2g34560 : 553.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G80350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35957 : 440.0) no description available & (gnl|cdd|30812 : 227.0) no description available & (p54774|cdc48_soybn : 184.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 1106.0) & (original description: Putative KAT2, Description = Katanin p60 catalytic subunit, PFAM = PF00004)' T '31.1' 'cell.organisation' 'niben101scf01274_223338-292281' '(at3g10180 : 1044.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G59540.1); Has 155291 Blast hits to 84008 proteins in 3275 species: Archae - 1854; Bacteria - 27736; Metazoa - 67441; Fungi - 13681; Plants - 10077; Viruses - 530; Other Eukaryotes - 33972 (source: NCBI BLink). & (gnl|cdd|30096 : 424.0) no description available & (gnl|cdd|35463 : 381.0) no description available & (p46869|fla10_chlre : 230.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2088.0) & (original description: Putative KIN7O, Description = Kinesin-like protein KIN-7O, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf01274_252558-275568' '(at3g10180 : 592.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G59540.1); Has 155291 Blast hits to 84008 proteins in 3275 species: Archae - 1854; Bacteria - 27736; Metazoa - 67441; Fungi - 13681; Plants - 10077; Viruses - 530; Other Eukaryotes - 33972 (source: NCBI BLink). & (gnl|cdd|35463 : 219.0) no description available & (gnl|cdd|30096 : 214.0) no description available & (p46869|fla10_chlre : 137.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1184.0) & (original description: Putative kif4, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf01304_1443865-1448008' '(q9st99|prof2_tobac : 204.0) Profilin-2 - Nicotiana tabacum (Common tobacco) & (at2g19770 : 177.0) Encodes profilin 5, originally named profilin 4 (PRO4/PFN4). Low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton. Pollen-specific plant profilin present predominantly in mature pollen and growing pollen tubes.; profilin 5 (PRF5); CONTAINS InterPro DOMAIN/s: Profilin/allergen (InterPro:IPR002097), Profilin, plant (InterPro:IPR005455); BEST Arabidopsis thaliana protein match is: profilin 4 (TAIR:AT4G29340.1); Has 915 Blast hits to 914 proteins in 244 species: Archae - 0; Bacteria - 2; Metazoa - 138; Fungi - 121; Plants - 583; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|36966 : 168.0) no description available & (gnl|cdd|84632 : 160.0) no description available & (reliability: 354.0) & (original description: Putative PRO2, Description = Profilin-2, PFAM = PF00235)' T '31.1' 'cell.organisation' 'niben101scf01501_129080-133818' '(q5jmf2|abil5_orysa : 110.0) Probable protein ABIL5 (Abl interactor-like protein 5) - Oryza sativa (Rice) & (at5g24310 : 86.7) One of four ABI-like proteins. Involved in trichome morphogenesis, root elongation. Associates with microtubules.; ABL interactor-like protein 3 (ABIL3); BEST Arabidopsis thaliana protein match is: ABL interactor-like protein 2 (TAIR:AT3G49290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative)' T '31.1' 'cell.organisation' 'niben101scf01531_379430-385805' '(at5g08120 : 142.0) Microtubule-associated and viral movement protein binding protein. Negatively regulates KN1 association to plasmodesmata and, consequently, cell-to-cell transport. Involved in the alignment of cortical microtubules, the patterning of stomata and in restricting tobamoviral infections.; movement protein binding protein 2C (MPB2C); Has 5726 Blast hits to 4344 proteins in 670 species: Archae - 77; Bacteria - 646; Metazoa - 3260; Fungi - 443; Plants - 256; Viruses - 12; Other Eukaryotes - 1032 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative MPB2Cb, Description = MPB2C-like protein, PFAM = )' T '31.1' 'cell.organisation' 'niben101scf01534_141309-147082' '(at2g38760 : 372.0) Annexins are calcium binding proteins that are localized in the cytoplasm. When cytosolic Ca2+ increases, they relocate to the plasma membrane.; annexin 3 (ANNAT3); FUNCTIONS IN: calcium-dependent phospholipid binding, calcium ion binding; INVOLVED IN: response to water deprivation, response to salt stress, response to cold, response to heat; LOCATED IN: vacuole, cell surface; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464); BEST Arabidopsis thaliana protein match is: annexin 8 (TAIR:AT5G12380.1); Has 3905 Blast hits to 2209 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 3079; Fungi - 145; Plants - 448; Viruses - 0; Other Eukaryotes - 233 (source: NCBI BLink). & (gnl|cdd|36037 : 299.0) no description available & (p51074|anx4_fraan : 255.0) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (reliability: 744.0) & (original description: Putative ANN3, Description = Annexin D3, PFAM = PF00191;PF00191;PF00191;PF00191)' T '31.1' 'cell.organisation' 'niben101scf01534_169813-174241' '(at2g38750 : 281.0) Annexins are a family of calcium dependent membrane binding proteins though to be involved in Golgi mediated secretion. This is one of four annexins identified in Arabidopsis.; annexin 4 (ANNAT4); FUNCTIONS IN: calcium-dependent phospholipid binding, calcium ion binding; INVOLVED IN: in 6 processes; LOCATED IN: cell surface; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin (InterPro:IPR001464); BEST Arabidopsis thaliana protein match is: annexin 8 (TAIR:AT5G12380.1); Has 2371 Blast hits to 2094 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 1728; Fungi - 90; Plants - 415; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|36037 : 211.0) no description available & (p51074|anx4_fraan : 172.0) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (reliability: 562.0) & (original description: Putative BnaC04g45910D, Description = BnaC04g45910D protein, PFAM = PF00191;PF00191;PF00191)' T '31.1' 'cell.organisation' 'niben101scf01534_181514-185540' '(at2g38760 : 293.0) Annexins are calcium binding proteins that are localized in the cytoplasm. When cytosolic Ca2+ increases, they relocate to the plasma membrane.; annexin 3 (ANNAT3); FUNCTIONS IN: calcium-dependent phospholipid binding, calcium ion binding; INVOLVED IN: response to water deprivation, response to salt stress, response to cold, response to heat; LOCATED IN: vacuole, cell surface; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464); BEST Arabidopsis thaliana protein match is: annexin 8 (TAIR:AT5G12380.1); Has 3905 Blast hits to 2209 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 3079; Fungi - 145; Plants - 448; Viruses - 0; Other Eukaryotes - 233 (source: NCBI BLink). & (gnl|cdd|36037 : 235.0) no description available & (p51074|anx4_fraan : 194.0) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (reliability: 586.0) & (original description: Putative anx2, Description = Annexin, PFAM = PF00191;PF00191;PF00191)' T '31.1' 'cell.organisation' 'niben101scf01534_203983-208824' '(at2g38750 : 285.0) Annexins are a family of calcium dependent membrane binding proteins though to be involved in Golgi mediated secretion. This is one of four annexins identified in Arabidopsis.; annexin 4 (ANNAT4); FUNCTIONS IN: calcium-dependent phospholipid binding, calcium ion binding; INVOLVED IN: in 6 processes; LOCATED IN: cell surface; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin (InterPro:IPR001464); BEST Arabidopsis thaliana protein match is: annexin 8 (TAIR:AT5G12380.1); Has 2371 Blast hits to 2094 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 1728; Fungi - 90; Plants - 415; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|36037 : 215.0) no description available & (p51074|anx4_fraan : 173.0) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (reliability: 570.0) & (original description: Putative ANN4, Description = Annexin D4, PFAM = PF00191;PF00191;PF00191)' T '31.1' 'cell.organisation' 'niben101scf01538_84916-91444' '(at2g38750 : 260.0) Annexins are a family of calcium dependent membrane binding proteins though to be involved in Golgi mediated secretion. This is one of four annexins identified in Arabidopsis.; annexin 4 (ANNAT4); FUNCTIONS IN: calcium-dependent phospholipid binding, calcium ion binding; INVOLVED IN: in 6 processes; LOCATED IN: cell surface; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin (InterPro:IPR001464); BEST Arabidopsis thaliana protein match is: annexin 8 (TAIR:AT5G12380.1); Has 2371 Blast hits to 2094 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 1728; Fungi - 90; Plants - 415; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|36037 : 210.0) no description available & (p51074|anx4_fraan : 168.0) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (reliability: 520.0) & (original description: Putative ANN4, Description = Annexin D4, PFAM = PF00191;PF00191)' T '31.1' 'cell.organisation' 'niben101scf01585_294981-303572' '(at4g19400 : 187.0) Profilin family protein; FUNCTIONS IN: actin binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: actin cytoskeleton; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Profilin/allergen (InterPro:IPR002097); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative F383_20995, Description = Putative heat shock factor, PFAM = PF00235)' T '31.1' 'cell.organisation' 'niben101scf01623_441404-451025' '(at2g47500 : 1113.0) P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 4 (TAIR:AT5G27000.1); Has 11938 Blast hits to 11443 proteins in 432 species: Archae - 0; Bacteria - 1; Metazoa - 5987; Fungi - 1397; Plants - 1883; Viruses - 0; Other Eukaryotes - 2670 (source: NCBI BLink). & (gnl|cdd|35460 : 467.0) no description available & (gnl|cdd|30088 : 444.0) no description available & (p46869|fla10_chlre : 198.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2226.0) & (original description: Putative kch2, Description = Kinesin-related protein, PFAM = PF00225;PF00307)' T '31.1' 'cell.organisation' 'niben101scf01695_3406-11387' '(at5g48160 : 666.0) Encodes a nuclear PHD finger protein that is functionally redundant with OBE1 and plays an important role in the maintenance and/or establishment of the root and shoot apical meristems.; OBERON2 (OBE2); FUNCTIONS IN: zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth, C globular stage, B proembryo stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423, plant (InterPro:IPR004082), Zinc finger, PHD-type (InterPro:IPR001965); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1423) (TAIR:AT3G07780.1); Has 2495 Blast hits to 2042 proteins in 337 species: Archae - 17; Bacteria - 243; Metazoa - 768; Fungi - 203; Plants - 349; Viruses - 34; Other Eukaryotes - 881 (source: NCBI BLink). & (gnl|cdd|70683 : 557.0) no description available & (reliability: 1332.0) & (original description: Putative PVIP, Description = OBERON-like protein, PFAM = PF16312;PF07227)' T '31.1' 'cell.organisation' 'niben101scf01695_308849-640083' '(at3g16630 : 1041.0) Kinesin-13A localized to entire Golgi stacks. Involved in trichome development.; KINESIN-13A; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: trichome morphogenesis; LOCATED IN: Golgi stack, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT3G16060.1); Has 9814 Blast hits to 9502 proteins in 306 species: Archae - 4; Bacteria - 2; Metazoa - 4282; Fungi - 1345; Plants - 1799; Viruses - 0; Other Eukaryotes - 2382 (source: NCBI BLink). & (gnl|cdd|35467 : 556.0) no description available & (gnl|cdd|30089 : 480.0) no description available & (p46869|fla10_chlre : 159.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2082.0) & (original description: Putative kif6, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf01696_245078-259980' '(at3g04710 : 551.0) ankyrin repeat family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Tetratricopeptide-like helical (InterPro:IPR011990), Ankyrin repeat-containing domain (InterPro:IPR020683), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1685) (TAIR:AT3G04700.1). & (gnl|cdd|35768 : 131.0) no description available & (gnl|cdd|29261 : 112.0) no description available & (q43468|stip_soybn : 81.6) Heat shock protein STI (Stress-inducible protein) (GmSTI) - Glycine max (Soybean) & (reliability: 1102.0) & (original description: Putative pco141871, Description = Ankyrin-1, PFAM = PF12796;PF12796;PF12796)' T '31.1' 'cell.organisation' 'niben101scf01721_161789-173362' '(at2g31820 : 640.0) Ankyrin repeat family protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT1G05640.1); Has 69909 Blast hits to 28585 proteins in 1153 species: Archae - 97; Bacteria - 6878; Metazoa - 33005; Fungi - 7349; Plants - 5597; Viruses - 621; Other Eukaryotes - 16362 (source: NCBI BLink). & (gnl|cdd|29261 : 102.0) no description available & (gnl|cdd|35730 : 95.1) no description available & (reliability: 1280.0) & (original description: Putative Os01g0837000, Description = Os01g0837000 protein, PFAM = PF13857;PF13962;PF12796;PF12796)' T '31.1' 'cell.organisation' 'niben101scf01731_1115411-1136239' '(at3g03490 : 242.0) Encodes one of two PEX19 peroxin isoforms. It is predominantly cytosolic and forms dimers.; peroxin 19-1 (PEX19-1); CONTAINS InterPro DOMAIN/s: Pex19 protein (InterPro:IPR006708); BEST Arabidopsis thaliana protein match is: peroxin 19-2 (TAIR:AT5G17550.1); Has 637 Blast hits to 625 proteins in 250 species: Archae - 3; Bacteria - 161; Metazoa - 169; Fungi - 149; Plants - 43; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|38343 : 165.0) no description available & (gnl|cdd|68195 : 138.0) no description available & (reliability: 484.0) & (original description: Putative PEX19-1, Description = Peroxisome biogenesis protein 19-1, PFAM = PF04614)' T '31.1' 'cell.organisation' 'niben101scf01764_372945-377783' '(at1g27500 : 751.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G27960.1); Has 11165 Blast hits to 5021 proteins in 667 species: Archae - 177; Bacteria - 3877; Metazoa - 4684; Fungi - 753; Plants - 379; Viruses - 0; Other Eukaryotes - 1295 (source: NCBI BLink). & (gnl|cdd|37051 : 355.0) no description available & (reliability: 1502.0) & (original description: Putative At3g27960, Description = Kinesin light chain-like protein, PFAM = PF13424;PF13424;PF13176;PF13181)' T '31.1' 'cell.organisation' 'niben101scf01848_287984-298409' '(at2g02240 : 262.0) maternal effect embryo arrest 66 (MEE66); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B2 (TAIR:AT2G02250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 524.0) & (original description: Putative At2g02240, Description = F-box protein At2g02240, PFAM = PF14299)' T '31.1' 'cell.organisation' 'niben101scf01851_351429-356446' '(at3g53000 : 447.0) phloem protein 2-A15 (PP2-A15); FUNCTIONS IN: carbohydrate binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 510 Blast hits to 504 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 510; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 894.0) & (original description: Putative PP2A15, Description = F-box protein PP2-A15, PFAM = PF14299)' T '31.1' 'cell.organisation' 'niben101scf01871_40333-43501' '(at5g43070 : 92.4) WPP family members contains an NE targeting domain. This domain, called the WPP domain after a highly conserved Trp-Pro-Pro motif, is necessary and sufficient for NE targeting of WPP1. RNAi suppression of WPP1 resulted in reduced mitotic activity.; WPP domain protein 1 (WPP1); BEST Arabidopsis thaliana protein match is: WPP domain protein 2 (TAIR:AT1G47200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative MAF1, Description = MFP1 attachment factor 1, PFAM = PF13943)' T '31.1' 'cell.organisation' 'niben101scf01936_622217-626783' '(at5g65020 : 441.0) Annexins are calcium binding proteins that are localized in the cytoplasm. When cytosolic Ca2+ increases, they relocate to the plasma membrane. They may be involved in the Golgi-mediated secretion of polysaccharides.; annexin 2 (ANNAT2); FUNCTIONS IN: calcium-dependent phospholipid binding, calcium ion binding; INVOLVED IN: polysaccharide transport, response to water deprivation, response to salt stress, response to cold, response to heat; LOCATED IN: cytosol, nucleus, cell surface; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464), Annexin, type plant (InterPro:IPR009118); BEST Arabidopsis thaliana protein match is: annexin 7 (TAIR:AT5G10230.1); Has 4555 Blast hits to 2244 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 3503; Fungi - 207; Plants - 559; Viruses - 0; Other Eukaryotes - 286 (source: NCBI BLink). & (gnl|cdd|36037 : 391.0) no description available & (p51074|anx4_fraan : 323.0) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (reliability: 882.0) & (original description: Putative ANN2, Description = Annexin D2, PFAM = PF00191;PF00191;PF00191;PF00191)' T '31.1' 'cell.organisation' 'niben101scf01959_378641-381155' '(gnl|cdd|38640 : 100.0) no description available & (at1g23220 : 89.0) Dynein light chain type 1 family protein; FUNCTIONS IN: microtubule motor activity; INVOLVED IN: microtubule-based process; LOCATED IN: microtubule associated complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dynein light chain, type 1/2 (InterPro:IPR001372); BEST Arabidopsis thaliana protein match is: Dynein light chain type 1 family protein (TAIR:AT5G20110.1); Has 1246 Blast hits to 1246 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 642; Fungi - 104; Plants - 252; Viruses - 0; Other Eukaryotes - 248 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative vfPIP, Description = Dynein light chain type 1 family protein, PFAM = PF01221)' T '31.1' 'cell.organisation' 'niben101scf01966_50691-56589' '(at5g53400 : 281.0) Encodes BOBBER1 (BOB1), a non-canonical small heat shock protein required for both development and thermotolerance. BOB1 is cytoplasmic at basal temperatures but forms heat shock granules containing canonical small heat shock proteins at high temperatures.; BOBBER1 (BOB1); CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT4G27890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37476 : 207.0) no description available & (reliability: 562.0) & (original description: Putative BOB1, Description = Protein BOBBER 1, PFAM = PF04969)' T '31.1' 'cell.organisation' 'niben101scf01985_485236-490440' '(gnl|cdd|39379 : 125.0) no description available & (gnl|cdd|29261 : 106.0) no description available & (at2g03430 : 91.3) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat protein (TAIR:AT5G66055.1); Has 130068 Blast hits to 38689 proteins in 1585 species: Archae - 162; Bacteria - 14649; Metazoa - 59864; Fungi - 13189; Plants - 7735; Viruses - 2061; Other Eukaryotes - 32408 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 83.2) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 182.6) & (original description: Putative Vpyl, Description = Ankyrin repeat, PH and SEC7 domain secG-like protein, PFAM = PF12796;PF12796;PF12796)' T '31.1' 'cell.organisation' 'niben101scf01988_59405-70492' '(at3g10310 : 772.0) P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 4 (TAIR:AT5G27000.1); Has 11194 Blast hits to 10379 proteins in 346 species: Archae - 2; Bacteria - 8; Metazoa - 5167; Fungi - 1411; Plants - 1943; Viruses - 0; Other Eukaryotes - 2663 (source: NCBI BLink). & (gnl|cdd|35460 : 446.0) no description available & (gnl|cdd|30088 : 413.0) no description available & (p46870|klp1_chlre : 190.0) Kinesin-like protein KLP1 - Chlamydomonas reinhardtii & (reliability: 1544.0) & (original description: Putative kch2, Description = Kinesin-like protein, PFAM = PF00225;PF00307)' T '31.1' 'cell.organisation' 'niben101scf01994_303816-309187' '(at2g37080 : 271.0) ROP interactive partner 3 (RIP3); LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: ROP interactive partner 4 (TAIR:AT3G53350.1); Has 147635 Blast hits to 77239 proteins in 3391 species: Archae - 1987; Bacteria - 30902; Metazoa - 62424; Fungi - 12574; Plants - 8109; Viruses - 683; Other Eukaryotes - 30956 (source: NCBI BLink). & (gnl|cdd|35383 : 80.3) no description available & (reliability: 542.0) & (original description: Putative p70, Description = P70 protein, PFAM = )' T '31.1' 'cell.organisation' 'niben101scf02001_81554-87523' '(at5g66055 : 400.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; ankyrin repeat protein (AKRP); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G40160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29261 : 119.0) no description available & (gnl|cdd|35729 : 96.6) no description available & (reliability: 800.0) & (original description: Putative AKRP, Description = Ankyrin repeat domain-containing protein, chloroplastic, PFAM = PF12796)' T '31.1' 'cell.organisation' 'niben101scf02016_21901-28906' '(at4g35450 : 370.0) Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.; ankyrin repeat-containing protein 2 (AKR2); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1). & (gnl|cdd|29261 : 120.0) no description available & (gnl|cdd|39379 : 85.8) no description available & (reliability: 740.0) & (original description: Putative AKR2B, Description = Ankyrin repeat domain-containing protein 2B, PFAM = PF12796)' T '31.1' 'cell.organisation' 'niben101scf02060_775678-779821' '(at4g15930 : 158.0) Dynein light chain type 1 family protein; FUNCTIONS IN: microtubule motor activity; INVOLVED IN: microtubule-based process; LOCATED IN: microtubule associated complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dynein light chain, type 1/2, conserved site (InterPro:IPR019763), Dynein light chain, type 1/2 (InterPro:IPR001372); BEST Arabidopsis thaliana protein match is: Dynein light chain type 1 family protein (TAIR:AT5G20110.1); Has 1403 Blast hits to 1403 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 730; Fungi - 108; Plants - 264; Viruses - 0; Other Eukaryotes - 301 (source: NCBI BLink). & (gnl|cdd|85315 : 129.0) no description available & (q39580|dyl1_chlre : 127.0) Dynein 8 kDa light chain, flagellar outer arm - Chlamydomonas reinhardtii & (gnl|cdd|38640 : 123.0) no description available & (reliability: 316.0) & (original description: Putative DYNLL2, Description = Dynein light chain 2, cytoplasmic, PFAM = PF01221)' T '31.1' 'cell.organisation' 'niben101scf02063_665360-669021' '(at3g26070 : 244.0) Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT3G26080.1); Has 483 Blast hits to 479 proteins in 86 species: Archae - 0; Bacteria - 99; Metazoa - 0; Fungi - 0; Plants - 334; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|68332 : 118.0) no description available & (reliability: 488.0) & (original description: Putative PAP4, Description = AtPGL25, PFAM = PF04755)' T '31.1' 'cell.organisation' 'niben101scf02090_241697-248427' '(at3g18670 : 212.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G04700.1); Has 4772 Blast hits to 3121 proteins in 218 species: Archae - 7; Bacteria - 222; Metazoa - 2187; Fungi - 197; Plants - 1396; Viruses - 2; Other Eukaryotes - 761 (source: NCBI BLink). & (reliability: 424.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF14244;PF12796;PF13962)' T '31.1' 'cell.organisation' 'niben101scf02172_761572-775145' '(at5g07740 : 677.0) actin binding; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; EXPRESSED IN: shoot apex, stem; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Tensin phosphatase, C2 domain (InterPro:IPR014020), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 protein (TAIR:AT5G07770.1). & (gnl|cdd|85898 : 359.0) no description available & (gnl|cdd|37133 : 273.0) no description available & (reliability: 1354.0) & (original description: Putative FH19, Description = Formin-like protein 19, PFAM = PF02181;PF10409)' T '31.1' 'cell.organisation' 'niben101scf02188_263490-277863' '(at3g27000 : 753.0) encodes a protein whose sequence is similar to actin-related proteins (ARPs) in other organisms. its transcript level is down regulated by light and is expressed in very low levels in all organs examined.; actin related protein 2 (ARP2); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: in 7 processes; LOCATED IN: Arp2/3 protein complex; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: Actin-like ATPase superfamily protein (TAIR:AT2G42100.1); Has 13000 Blast hits to 12789 proteins in 2576 species: Archae - 4; Bacteria - 10; Metazoa - 5530; Fungi - 3345; Plants - 1585; Viruses - 2; Other Eukaryotes - 2524 (source: NCBI BLink). & (gnl|cdd|35896 : 685.0) no description available & (gnl|cdd|47597 : 463.0) no description available & (p53498|act_chlre : 366.0) Actin - Chlamydomonas reinhardtii & (reliability: 1506.0) & (original description: Putative ARP2, Description = Actin-related protein 2, PFAM = PF00022)' T '31.1' 'cell.organisation' 'niben101scf02190_421788-430663' '(at2g31820 : 695.0) Ankyrin repeat family protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT1G05640.1); Has 69909 Blast hits to 28585 proteins in 1153 species: Archae - 97; Bacteria - 6878; Metazoa - 33005; Fungi - 7349; Plants - 5597; Viruses - 621; Other Eukaryotes - 16362 (source: NCBI BLink). & (gnl|cdd|35727 : 111.0) no description available & (gnl|cdd|29261 : 94.0) no description available & (reliability: 1390.0) & (original description: Putative BnaA04g18530D, Description = BnaA04g18530D protein, PFAM = PF12796;PF12796;PF13857;PF13962)' T '31.1' 'cell.organisation' 'niben101scf02191_4021-19261' '(at1g43700 : 204.0) Encodes a VirE2-interacting protein. VIP1 mediates nuclear translocation of VirE2 via its amino half, and interacts with histone H2A via it carboxyl half.; VIRE2-interacting protein 1 (VIP1); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to sulfate starvation, sulfate transport, DNA mediated transformation, nuclear import; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT1G06070.1); Has 1450 Blast hits to 1450 proteins in 153 species: Archae - 0; Bacteria - 51; Metazoa - 59; Fungi - 47; Plants - 1254; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (q69il4|rf2a_orysa : 164.0) Transcription factor RF2a - Oryza sativa (Rice) & (reliability: 408.0) & (original description: Putative rsg, Description = BZIP transcriptional activator RSG, PFAM = PF00170)' T '31.1' 'cell.organisation' 'niben101scf02195_389756-393446' '(at3g50390 : 482.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G26490.1); Has 33178 Blast hits to 17374 proteins in 678 species: Archae - 38; Bacteria - 5184; Metazoa - 12049; Fungi - 7688; Plants - 3936; Viruses - 0; Other Eukaryotes - 4283 (source: NCBI BLink). & (gnl|cdd|29257 : 159.0) no description available & (gnl|cdd|35495 : 104.0) no description available & (reliability: 964.0) & (original description: Putative wdrp, Description = Transducin/WD40 repeat-like superfamily protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '31.1' 'cell.organisation' 'niben101scf02232_567809-577974' '(at2g34560 : 502.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G80350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35957 : 452.0) no description available & (gnl|cdd|30812 : 234.0) no description available & (q96372|cdc48_capan : 169.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 1004.0) & (original description: Putative KAT2, Description = Katanin p60 catalytic subunit, PFAM = PF00004)' T '31.1' 'cell.organisation' 'niben101scf02278_199761-207554' '(at3g24530 : 739.0) AAA-type ATPase family protein / ankyrin repeat family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Ankyrin repeat-containing domain (InterPro:IPR020683), CbxX/CfqX (InterPro:IPR000641), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 1 in Arabidopsis thaliana (TAIR:AT2G28840.1); Has 62125 Blast hits to 27268 proteins in 1602 species: Archae - 369; Bacteria - 7189; Metazoa - 29752; Fungi - 5124; Plants - 2920; Viruses - 566; Other Eukaryotes - 16205 (source: NCBI BLink). & (gnl|cdd|35949 : 176.0) no description available & (gnl|cdd|29261 : 92.5) no description available & (reliability: 1478.0) & (original description: Putative v1g62711, Description = Predicted protein, PFAM = PF00004;PF12796)' T '31.1' 'cell.organisation' 'niben101scf02290_719210-725300' '(at5g53400 : 278.0) Encodes BOBBER1 (BOB1), a non-canonical small heat shock protein required for both development and thermotolerance. BOB1 is cytoplasmic at basal temperatures but forms heat shock granules containing canonical small heat shock proteins at high temperatures.; BOBBER1 (BOB1); CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT4G27890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37476 : 202.0) no description available & (reliability: 556.0) & (original description: Putative nudC, Description = Nuclear migration protein nudC, PFAM = PF04969)' T '31.1' 'cell.organisation' 'niben101scf02303_80878-85147' '(at1g07710 : 586.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT5G60070.1); Has 71061 Blast hits to 30444 proteins in 1217 species: Archae - 72; Bacteria - 7320; Metazoa - 31750; Fungi - 7301; Plants - 5738; Viruses - 586; Other Eukaryotes - 18294 (source: NCBI BLink). & (gnl|cdd|35729 : 107.0) no description available & (gnl|cdd|29261 : 102.0) no description available & (reliability: 1172.0) & (original description: Putative At5g02620, Description = Ankyrin repeat-containing protein At5g02620, PFAM = PF12796;PF12796;PF12796;PF13962)' T '31.1' 'cell.organisation' 'niben101scf02351_794433-802372' '(at1g72250 : 434.0) Di-glucose binding protein with Kinesin motor domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Malectin/receptor-like protein kinase (InterPro:IPR021720), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Kinesin motor domain (TAIR:AT2G22610.2). & (gnl|cdd|30088 : 260.0) no description available & (gnl|cdd|35460 : 234.0) no description available & (p46869|fla10_chlre : 119.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 868.0) & (original description: Putative LOC100193929, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf02373_556307-559545' '(at1g35720 : 392.0) Encodes a member of the annexin gene family, a diverse, multigene family of calcium-dependent, membrane-binding proteins. The protein was determined to have peroxidase activity. This activity is thought to be dependent on the presence of post-translational modifications (most likely phosphorylation). The protein was shown to be present as a mixture of monomer and homodimer. The homodimerization seems to be dependent on the presence of Ca2+ or H2O2. The dimerization was prevented by the addition of DTT, β-mercaptoethanol and TCEP. Annat1 mRNA is expressed in flowers, roots,leaves and stems and is most abundant in stems. mRNA levels are increased in response to oxidative stress. Developmental expression patterns suggest a role in Golgi-mediated polysaccharide secretion.; annexin 1 (ANNAT1); FUNCTIONS IN: in 7 functions; INVOLVED IN: in 8 processes; LOCATED IN: in 10 components; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464), Annexin, type plant (InterPro:IPR009118); BEST Arabidopsis thaliana protein match is: annexin 2 (TAIR:AT5G65020.1); Has 3809 Blast hits to 2217 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 2893; Fungi - 160; Plants - 482; Viruses - 0; Other Eukaryotes - 274 (source: NCBI BLink). & (gnl|cdd|36037 : 341.0) no description available & (p51074|anx4_fraan : 293.0) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (reliability: 784.0) & (original description: Putative an34, Description = Annexin, PFAM = PF00191;PF00191;PF00191;PF00191)' T '31.1' 'cell.organisation' 'niben101scf02401_53023-67347' '(at1g48635 : 404.0) peroxin 3 (PEX3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: peroxisome organization; LOCATED IN: mitochondrion, peroxisome, integral to peroxisomal membrane; CONTAINS InterPro DOMAIN/s: Peroxin-3 (InterPro:IPR006966); BEST Arabidopsis thaliana protein match is: peroxin 3-1 (TAIR:AT3G18160.1); Has 293 Blast hits to 293 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 111; Plants - 49; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|39645 : 232.0) no description available & (gnl|cdd|68456 : 108.0) no description available & (reliability: 808.0) & (original description: Putative PEX3, Description = Peroxisome biogenesis protein 3-2, PFAM = PF04882)' T '31.1' 'cell.organisation' 'niben101scf02404_165132-185106' '(at3g54870 : 815.0) Armadillo-repeat containing kinesin-related protein. Plays a role during transition to root-hair tip growth.Mutants have short, branched root hairs and an excess of endoplasmic microtubles. Phenotype suggests ARK1 plays a role in modulating microtubule depolymerization during root hair tip growth.; MORPHOGENESIS OF ROOT HAIR 2 (MRH2); FUNCTIONS IN: microtubule binding, actin binding, microtubule motor activity; INVOLVED IN: root hair cell tip growth, root hair cell differentiation, regulation of microtubule polymerization or depolymerization; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: armadillo repeat kinesin 3 (TAIR:AT1G12430.1); Has 140801 Blast hits to 75642 proteins in 3085 species: Archae - 1274; Bacteria - 19600; Metazoa - 61665; Fungi - 11208; Plants - 7696; Viruses - 409; Other Eukaryotes - 38949 (source: NCBI BLink). & (gnl|cdd|35461 : 358.0) no description available & (gnl|cdd|84623 : 316.0) no description available & (o23826|k125_tobac : 186.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 1630.0) & (original description: Putative ARK1, Description = Armadillo repeat-containing kinesin-like protein 1, PFAM = PF00514;PF00225)' T '31.1' 'cell.organisation' 'niben101scf02427_476021-480543' '(at5g65860 : 537.0) ankyrin repeat family protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Arginine N-methyltransferase 2 (InterPro:IPR017408), Methyltransferase type 11 (InterPro:IPR013216), Ankyrin repeat (InterPro:IPR002110); Has 14669 Blast hits to 7820 proteins in 738 species: Archae - 65; Bacteria - 1760; Metazoa - 7798; Fungi - 1170; Plants - 439; Viruses - 38; Other Eukaryotes - 3399 (source: NCBI BLink). & (gnl|cdd|36921 : 363.0) no description available & (reliability: 1074.0) & (original description: Putative 33022, Description = Predicted protein, PFAM = PF12796)' T '31.1' 'cell.organisation' 'niben101scf02430_401704-413273' '(at2g38440 : 304.0) Encodes a subunit of the WAVE complex. The WAVE complex is required for activation of ARP2/3 complex which functions in actin microfilament nucleation and branching. Mutations cause defects in both the actin and microtubule cytoskeletons that result in aberrant epidermal cell expansion. itb1 mutants showed irregularities in trichome branch positioning and expansion. The SHD domain of this protein binds to BRK1 and overexpression of the SHD domain results in a dominant negative phenotype.; SCAR homolog 2 (SCAR2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: SCAR complex, plasma membrane, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding WH2 (InterPro:IPR003124); BEST Arabidopsis thaliana protein match is: SCAR family protein 4 (TAIR:AT5G01730.1); Has 5162 Blast hits to 2275 proteins in 363 species: Archae - 24; Bacteria - 2785; Metazoa - 880; Fungi - 591; Plants - 224; Viruses - 0; Other Eukaryotes - 658 (source: NCBI BLink). & (q84tx2|scrl1_orysa : 223.0) SCAR-like protein 1 - Oryza sativa (Rice) & (reliability: 608.0) & (original description: Putative Sb02g043823, Description = Putative uncharacterized protein Sb02g043823, PFAM = )' T '31.1' 'cell.organisation' 'niben101scf02455_176441-183176' '(at1g80480 : 562.0) plastid transcriptionally active 17 (PTAC17); LOCATED IN: plastid chromosome, chloroplast stroma, chloroplast, nucleoid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495), Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal (InterPro:IPR011629); BEST Arabidopsis thaliana protein match is: Cobalamin biosynthesis CobW-like protein (TAIR:AT1G15730.1); Has 22612 Blast hits to 14499 proteins in 1972 species: Archae - 190; Bacteria - 10146; Metazoa - 2946; Fungi - 801; Plants - 655; Viruses - 16; Other Eukaryotes - 7858 (source: NCBI BLink). & (gnl|cdd|37954 : 457.0) no description available & (gnl|cdd|30869 : 308.0) no description available & (reliability: 1106.0) & (original description: Putative PTAC17, Description = Cobalamin synthesis protein P47K, PFAM = PF02492;PF07683)' T '31.1' 'cell.organisation' 'niben101scf02466_170892-185646' '(at5g02370 : 583.0) ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, DNA binding, ATP binding; INVOLVED IN: DNA repair, microtubule-based movement; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Helix-hairpin-helix DNA-binding motif, class 1 (InterPro:IPR003583), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT5G23910.1); Has 10070 Blast hits to 9659 proteins in 326 species: Archae - 0; Bacteria - 33; Metazoa - 4508; Fungi - 1335; Plants - 1813; Viruses - 0; Other Eukaryotes - 2381 (source: NCBI BLink). & (gnl|cdd|30098 : 373.0) no description available & (gnl|cdd|35463 : 292.0) no description available & (p46869|fla10_chlre : 154.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1166.0) & (original description: Putative kif22, Description = Kinesin-like protein, PFAM = PF12836;PF00225)' T '31.1' 'cell.organisation' 'niben101scf02508_749951-753881' '(q9st99|prof2_tobac : 207.0) Profilin-2 - Nicotiana tabacum (Common tobacco) & (at2g19770 : 174.0) Encodes profilin 5, originally named profilin 4 (PRO4/PFN4). Low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton. Pollen-specific plant profilin present predominantly in mature pollen and growing pollen tubes.; profilin 5 (PRF5); CONTAINS InterPro DOMAIN/s: Profilin/allergen (InterPro:IPR002097), Profilin, plant (InterPro:IPR005455); BEST Arabidopsis thaliana protein match is: profilin 4 (TAIR:AT4G29340.1); Has 915 Blast hits to 914 proteins in 244 species: Archae - 0; Bacteria - 2; Metazoa - 138; Fungi - 121; Plants - 583; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|36966 : 165.0) no description available & (gnl|cdd|84632 : 159.0) no description available & (reliability: 348.0) & (original description: Putative PRO2, Description = Profilin-2, PFAM = PF00235)' T '31.1' 'cell.organisation' 'niben101scf02522_192389-195517' '(at1g13330 : 273.0) Encodes the Arabidopsis Hop2 homologue. In other species, Hop2 is proposed to be involved in inter-homolog bias in double strand break repair.; Arabidopsis Hop2 homolog (AHP2); CONTAINS InterPro DOMAIN/s: Tat binding protein 1-interacting (InterPro:IPR010776); Has 3022 Blast hits to 2708 proteins in 418 species: Archae - 82; Bacteria - 427; Metazoa - 1139; Fungi - 246; Plants - 98; Viruses - 21; Other Eukaryotes - 1009 (source: NCBI BLink). & (gnl|cdd|39803 : 198.0) no description available & (gnl|cdd|70565 : 133.0) no description available & (reliability: 546.0) & (original description: Putative HOP2, Description = Homologous-pairing protein 2 homolog, PFAM = PF07106)' T '31.1' 'cell.organisation' 'niben101scf02525_15257-20158' '(at4g16144 : 95.9) Encodes AMSH3, a deubiquitinating enzyme that hydrolyzes K48- and K63-linked ubiquitin chains in vitro. Required for intracellular trafficking and vacuole biogenesis.; associated molecule with the SH3 domain of STAM 3 (AMSH3); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: associated molecule with the SH3 domain of STAM 1 (TAIR:AT1G48790.1); Has 901 Blast hits to 707 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 373; Fungi - 228; Plants - 224; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 185.6) & (original description: Putative PGSC0003DMG400007555, Description = XB3 in, putative isoform 1, PFAM = PF08969;PF13920)' T '31.1' 'cell.organisation' 'niben101scf02525_425888-432154' '(at4g14330 : 668.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: phragmoplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 1 (TAIR:AT4G21270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35464 : 380.0) no description available & (gnl|cdd|30083 : 252.0) no description available & (o23826|k125_tobac : 117.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 1336.0) & (original description: Putative BnaA08g17270D, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf02525_438344-446576' '(at3g23400 : 261.0) fibrillin 4 (FIB4); FUNCTIONS IN: structural molecule activity; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: Plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT3G26070.1); Has 367 Blast hits to 365 proteins in 76 species: Archae - 0; Bacteria - 87; Metazoa - 0; Fungi - 0; Plants - 273; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|68332 : 149.0) no description available & (reliability: 522.0) & (original description: Putative HrBP1, Description = Harpin binding protein 1, PFAM = PF04755)' T '31.1' 'cell.organisation' 'niben101scf02571_183879-195821' '(at1g74790 : 877.0) catalytics; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Soluble quinoprotein glucose/sorbosone dehydrogenase (InterPro:IPR011041), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: hipl2 protein precursor (TAIR:AT5G62630.1); Has 3691 Blast hits to 3691 proteins in 820 species: Archae - 60; Bacteria - 1937; Metazoa - 139; Fungi - 4; Plants - 281; Viruses - 0; Other Eukaryotes - 1270 (source: NCBI BLink). & (gnl|cdd|32316 : 80.1) no description available & (reliability: 1754.0) & (original description: Putative HIPL1, Description = HIPL1 protein, PFAM = PF07995)' T '31.1' 'cell.organisation' 'niben101scf02605_17896-20717' '(at4g27360 : 122.0) Dynein light chain type 1 family protein; FUNCTIONS IN: microtubule motor activity; INVOLVED IN: microtubule-based process; LOCATED IN: microtubule associated complex; CONTAINS InterPro DOMAIN/s: Dynein light chain, type 1/2 (InterPro:IPR001372); BEST Arabidopsis thaliana protein match is: Dynein light chain type 1 family protein (TAIR:AT3G16120.1); Has 1221 Blast hits to 1219 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 628; Fungi - 103; Plants - 253; Viruses - 0; Other Eukaryotes - 237 (source: NCBI BLink). & (gnl|cdd|38640 : 114.0) no description available & (gnl|cdd|85315 : 93.8) no description available & (reliability: 244.0) & (original description: Putative ctp, Description = Dynein light chain 1, cytoplasmic, PFAM = PF01221)' T '31.1' 'cell.organisation' 'niben101scf02606_569712-575492' '(at2g02240 : 258.0) maternal effect embryo arrest 66 (MEE66); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B2 (TAIR:AT2G02250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 516.0) & (original description: Putative At2g02240, Description = F-box protein At2g02240, PFAM = PF14299)' T '31.1' 'cell.organisation' 'niben101scf02752_44329-58074' '(at5g18580 : 816.0) fass mutants have aberrant cell shapes due to defects in arrangement of cortical microtubules. Encodes a protein highly conserved in higher plants and similar in its C-terminal part to B' regulatory subunits of type 2A protein phosphatases. Interacts with an Arabidopsis type A subunit of PP2A in the yeast two-hybrid system.; FASS 1 (FASS); CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G28850.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37773 : 447.0) no description available & (reliability: 1632.0) & (original description: Putative TON2, Description = Probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2, PFAM = PF13499)' T '31.1' 'cell.organisation' 'niben101scf02792_249020-254871' '(at2g38760 : 377.0) Annexins are calcium binding proteins that are localized in the cytoplasm. When cytosolic Ca2+ increases, they relocate to the plasma membrane.; annexin 3 (ANNAT3); FUNCTIONS IN: calcium-dependent phospholipid binding, calcium ion binding; INVOLVED IN: response to water deprivation, response to salt stress, response to cold, response to heat; LOCATED IN: vacuole, cell surface; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464); BEST Arabidopsis thaliana protein match is: annexin 8 (TAIR:AT5G12380.1); Has 3905 Blast hits to 2209 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 3079; Fungi - 145; Plants - 448; Viruses - 0; Other Eukaryotes - 233 (source: NCBI BLink). & (gnl|cdd|36037 : 305.0) no description available & (p51074|anx4_fraan : 264.0) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (reliability: 754.0) & (original description: Putative an34, Description = Annexin, PFAM = PF00191;PF00191;PF00191;PF00191)' T '31.1' 'cell.organisation' 'niben101scf02792_276501-281072' '(at2g38750 : 273.0) Annexins are a family of calcium dependent membrane binding proteins though to be involved in Golgi mediated secretion. This is one of four annexins identified in Arabidopsis.; annexin 4 (ANNAT4); FUNCTIONS IN: calcium-dependent phospholipid binding, calcium ion binding; INVOLVED IN: in 6 processes; LOCATED IN: cell surface; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin (InterPro:IPR001464); BEST Arabidopsis thaliana protein match is: annexin 8 (TAIR:AT5G12380.1); Has 2371 Blast hits to 2094 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 1728; Fungi - 90; Plants - 415; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|36037 : 219.0) no description available & (p51074|anx4_fraan : 170.0) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (reliability: 546.0) & (original description: Putative Ann5, Description = Ann5 protein, PFAM = PF00191;PF00191;PF00191)' T '31.1' 'cell.organisation' 'niben101scf02792_302172-307406' '(at2g38760 : 386.0) Annexins are calcium binding proteins that are localized in the cytoplasm. When cytosolic Ca2+ increases, they relocate to the plasma membrane.; annexin 3 (ANNAT3); FUNCTIONS IN: calcium-dependent phospholipid binding, calcium ion binding; INVOLVED IN: response to water deprivation, response to salt stress, response to cold, response to heat; LOCATED IN: vacuole, cell surface; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464); BEST Arabidopsis thaliana protein match is: annexin 8 (TAIR:AT5G12380.1); Has 3905 Blast hits to 2209 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 3079; Fungi - 145; Plants - 448; Viruses - 0; Other Eukaryotes - 233 (source: NCBI BLink). & (gnl|cdd|36037 : 322.0) no description available & (p51074|anx4_fraan : 275.0) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (reliability: 772.0) & (original description: Putative ANN3, Description = Annexin D3, PFAM = PF00191;PF00191;PF00191;PF00191)' T '31.1' 'cell.organisation' 'niben101scf02803_1-26168' '(at3g54870 : 818.0) Armadillo-repeat containing kinesin-related protein. Plays a role during transition to root-hair tip growth.Mutants have short, branched root hairs and an excess of endoplasmic microtubles. Phenotype suggests ARK1 plays a role in modulating microtubule depolymerization during root hair tip growth.; MORPHOGENESIS OF ROOT HAIR 2 (MRH2); FUNCTIONS IN: microtubule binding, actin binding, microtubule motor activity; INVOLVED IN: root hair cell tip growth, root hair cell differentiation, regulation of microtubule polymerization or depolymerization; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: armadillo repeat kinesin 3 (TAIR:AT1G12430.1); Has 140801 Blast hits to 75642 proteins in 3085 species: Archae - 1274; Bacteria - 19600; Metazoa - 61665; Fungi - 11208; Plants - 7696; Viruses - 409; Other Eukaryotes - 38949 (source: NCBI BLink). & (gnl|cdd|35461 : 364.0) no description available & (gnl|cdd|84623 : 319.0) no description available & (o23826|k125_tobac : 191.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 1636.0) & (original description: Putative kif3, Description = Kinesin-like protein, PFAM = PF00514;PF00225)' T '31.1' 'cell.organisation' 'niben101scf02822_667574-682602' '(at5g17410 : 931.0) Spc97 / Spc98 family of spindle pole body (SBP) component; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: spindle pole body component 98 (TAIR:AT5G06680.1); Has 1351 Blast hits to 1243 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 645; Fungi - 324; Plants - 181; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (gnl|cdd|37212 : 630.0) no description available & (gnl|cdd|67734 : 406.0) no description available & (q9sc88|gcp4_medtr : 89.4) Gamma-tubulin complex component 4 homolog - Medicago truncatula (Barrel medic) & (reliability: 1862.0) & (original description: Putative GCP2, Description = Gamma-tubulin complex component 2, PFAM = PF04130)' T '31.1' 'cell.organisation' 'niben101scf02828_84880-96193' '(at4g18950 : 212.0) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Integrin-linked protein kinase (InterPro:IPR016253), Ankyrin repeat-containing domain (InterPro:IPR020683), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G58760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 118.0) no description available & (gnl|cdd|29142 : 107.0) no description available & (reliability: 424.0) & (original description: Putative PGSC0003DMG401030595, Description = Ankyrin-kinase, putative, PFAM = PF13857;PF00069)' T '31.1' 'cell.organisation' 'niben101scf02839_293265-299068' '(at5g53400 : 290.0) Encodes BOBBER1 (BOB1), a non-canonical small heat shock protein required for both development and thermotolerance. BOB1 is cytoplasmic at basal temperatures but forms heat shock granules containing canonical small heat shock proteins at high temperatures.; BOBBER1 (BOB1); CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT4G27890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37476 : 217.0) no description available & (reliability: 580.0) & (original description: Putative BOB1, Description = Protein BOBBER 1, PFAM = PF04969)' T '31.1' 'cell.organisation' 'niben101scf02852_47168-57451' '(at5g48160 : 615.0) Encodes a nuclear PHD finger protein that is functionally redundant with OBE1 and plays an important role in the maintenance and/or establishment of the root and shoot apical meristems.; OBERON2 (OBE2); FUNCTIONS IN: zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth, C globular stage, B proembryo stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423, plant (InterPro:IPR004082), Zinc finger, PHD-type (InterPro:IPR001965); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1423) (TAIR:AT3G07780.1); Has 2495 Blast hits to 2042 proteins in 337 species: Archae - 17; Bacteria - 243; Metazoa - 768; Fungi - 203; Plants - 349; Viruses - 34; Other Eukaryotes - 881 (source: NCBI BLink). & (gnl|cdd|70683 : 530.0) no description available & (reliability: 1230.0) & (original description: Putative OBE2, Description = Protein OBERON 2, PFAM = PF07227;PF16312)' T '31.1' 'cell.organisation' 'niben101scf02864_550536-558358' '(at5g66310 : 584.0) ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT3G51150.2); Has 12086 Blast hits to 11258 proteins in 438 species: Archae - 14; Bacteria - 210; Metazoa - 5156; Fungi - 1590; Plants - 1989; Viruses - 17; Other Eukaryotes - 3110 (source: NCBI BLink). & (gnl|cdd|35463 : 447.0) no description available & (gnl|cdd|30096 : 426.0) no description available & (p46869|fla10_chlre : 220.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1168.0) & (original description: Putative PGSC0003DMG400012011, Description = Kinesin-like protein, PFAM = PF11995;PF00225)' T '31.1' 'cell.organisation' 'niben101scf02881_532465-541063' '(at1g73860 : 783.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; EXPRESSED IN: petal, sepal, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G18410.1); Has 138507 Blast hits to 76202 proteins in 2961 species: Archae - 1220; Bacteria - 20098; Metazoa - 63175; Fungi - 11698; Plants - 7059; Viruses - 430; Other Eukaryotes - 34827 (source: NCBI BLink). & (gnl|cdd|35460 : 438.0) no description available & (gnl|cdd|30088 : 410.0) no description available & (p46869|fla10_chlre : 172.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1566.0) & (original description: Putative kch2, Description = Kinesin-like protein, PFAM = PF00307;PF00225)' T '31.1' 'cell.organisation' 'niben101scf02903_114724-133582' '(at3g54070 : 202.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G35810.1); Has 10613 Blast hits to 6237 proteins in 350 species: Archae - 27; Bacteria - 619; Metazoa - 5584; Fungi - 682; Plants - 1506; Viruses - 31; Other Eukaryotes - 2164 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative At5g35810, Description = Ankyrin repeat family protein, PFAM = PF13962;PF12796)' T '31.1' 'cell.organisation' 'niben101scf02953_75074-79270' '(p80471|lipc_soltu : 407.0) Light-induced protein, chloroplast precursor (Chloroplastic drought-induced stress protein CDSP-34) - Solanum tuberosum (Potato) & (at4g22240 : 285.0) Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: fruit, guard cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: fibrillin (TAIR:AT4G04020.1); Has 461 Blast hits to 460 proteins in 78 species: Archae - 0; Bacteria - 75; Metazoa - 0; Fungi - 0; Plants - 360; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|68332 : 222.0) no description available & (reliability: 570.0) & (original description: Putative CHRC, Description = Plastid lipid-associated protein 3, chloroplastic, PFAM = PF04755)' T '31.1' 'cell.organisation' 'niben101scf02953_75290-77758' '(p80471|lipc_soltu : 179.0) Light-induced protein, chloroplast precursor (Chloroplastic drought-induced stress protein CDSP-34) - Solanum tuberosum (Potato) & (at4g22240 : 158.0) Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: fruit, guard cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: fibrillin (TAIR:AT4G04020.1); Has 461 Blast hits to 460 proteins in 78 species: Archae - 0; Bacteria - 75; Metazoa - 0; Fungi - 0; Plants - 360; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|68332 : 100.0) no description available & (reliability: 316.0) & (original description: Putative CHRC, Description = Probable plastid-lipid-associated protein 2, chloroplastic, PFAM = PF04755)' T '31.1' 'cell.organisation' 'niben101scf02974_56060-66822' '(at1g63640 : 763.0) P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (TAIR:AT5G41310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35460 : 476.0) no description available & (gnl|cdd|30088 : 413.0) no description available & (p46869|fla10_chlre : 200.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1526.0) & (original description: Putative kch2, Description = Kinesin-like protein, PFAM = PF00225;PF00307)' T '31.1' 'cell.organisation' 'niben101scf02982_26351-30486' '(at5g53400 : 196.0) Encodes BOBBER1 (BOB1), a non-canonical small heat shock protein required for both development and thermotolerance. BOB1 is cytoplasmic at basal temperatures but forms heat shock granules containing canonical small heat shock proteins at high temperatures.; BOBBER1 (BOB1); CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT4G27890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37476 : 173.0) no description available & (reliability: 392.0) & (original description: Putative nudC, Description = Nuclear migration protein nudC, PFAM = PF04969)' T '31.1' 'cell.organisation' 'niben101scf03048_96918-103588' '(at4g14330 : 717.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: phragmoplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 1 (TAIR:AT4G21270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35464 : 351.0) no description available & (gnl|cdd|30083 : 253.0) no description available & (o23826|k125_tobac : 114.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 1434.0) & (original description: Putative IDP471, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf03049_426906-464636' '(at3g17360 : 671.0) PHRAGMOPLAST ORIENTING KINESIN 1 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK1 constructs were more limited than those for POK2; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls.; phragmoplast orienting kinesin 1 (POK1); FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: cytokinesis; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast orienting kinesin 2 (TAIR:AT3G19050.1); Has 97051 Blast hits to 52483 proteins in 2606 species: Archae - 1597; Bacteria - 13842; Metazoa - 45578; Fungi - 8395; Plants - 6409; Viruses - 244; Other Eukaryotes - 20986 (source: NCBI BLink). & (gnl|cdd|30095 : 496.0) no description available & (gnl|cdd|39481 : 363.0) no description available & (p46869|fla10_chlre : 251.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1342.0) & (original description: Putative kif15, Description = Kinesin-like protein KIF15, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf03062_541734-546098' '(gnl|cdd|39379 : 142.0) no description available & (gnl|cdd|29261 : 113.0) no description available & (at2g31820 : 95.5) Ankyrin repeat family protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT1G05640.1); Has 69909 Blast hits to 28585 proteins in 1153 species: Archae - 97; Bacteria - 6878; Metazoa - 33005; Fungi - 7349; Plants - 5597; Viruses - 621; Other Eukaryotes - 16362 (source: NCBI BLink). & (reliability: 191.0) & (original description: Putative Os01g0829100, Description = Os01g0829100 protein, PFAM = PF12796;PF12796;PF00635;PF13606)' T '31.1' 'cell.organisation' 'niben101scf03080_309563-327022' '(at3g19050 : 1695.0) PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls.; phragmoplast orienting kinesin 2 (POK2); FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: cytokinesis; EXPRESSED IN: root vascular system, primary root tip, lateral root primordium; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast orienting kinesin 1 (TAIR:AT3G17360.1); Has 204267 Blast hits to 80386 proteins in 3219 species: Archae - 3327; Bacteria - 35963; Metazoa - 90351; Fungi - 17822; Plants - 12667; Viruses - 746; Other Eukaryotes - 43391 (source: NCBI BLink). & (gnl|cdd|30095 : 422.0) no description available & (gnl|cdd|39481 : 327.0) no description available & (p46869|fla10_chlre : 230.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 3390.0) & (original description: Putative TBK8, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf03082_157868-165765' '(at4g35450 : 370.0) Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.; ankyrin repeat-containing protein 2 (AKR2); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1). & (gnl|cdd|29261 : 120.0) no description available & (gnl|cdd|39379 : 85.4) no description available & (reliability: 740.0) & (original description: Putative AKR2B, Description = Ankyrin repeat domain-containing protein 2B, PFAM = PF12796)' T '31.1' 'cell.organisation' 'niben101scf03091_75509-80482' '(at3g03490 : 241.0) Encodes one of two PEX19 peroxin isoforms. It is predominantly cytosolic and forms dimers.; peroxin 19-1 (PEX19-1); CONTAINS InterPro DOMAIN/s: Pex19 protein (InterPro:IPR006708); BEST Arabidopsis thaliana protein match is: peroxin 19-2 (TAIR:AT5G17550.1); Has 637 Blast hits to 625 proteins in 250 species: Archae - 3; Bacteria - 161; Metazoa - 169; Fungi - 149; Plants - 43; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|38343 : 160.0) no description available & (gnl|cdd|68195 : 136.0) no description available & (reliability: 482.0) & (original description: Putative Sb04g032760, Description = Putative uncharacterized protein Sb04g032760, PFAM = PF04614)' T '31.1' 'cell.organisation' 'niben101scf03107_180355-190886' '(gnl|cdd|35269 : 925.0) no description available & (at4g26700 : 923.0) fimbrin-like protein; fimbrin 1 (FIM1); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actinin-type, actin-binding, conserved site (InterPro:IPR001589), Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715); BEST Arabidopsis thaliana protein match is: Actin binding Calponin homology (CH) domain-containing protein (TAIR:AT5G55400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34673 : 218.0) no description available & (reliability: 1846.0) & (original description: Putative fimD, Description = Fimbrin, PFAM = PF00307;PF00307;PF00307;PF00307)' T '31.1' 'cell.organisation' 'niben101scf03160_129067-142567' '(at1g30825 : 421.0) Involved in trichome maturation. mutant displays enlarged trichomes; DISTORTED TRICHOMES 2 (DIS2); CONTAINS InterPro DOMAIN/s: Arp2/3 complex, 34kDa subunit p34-Arc (InterPro:IPR007188); BEST Arabidopsis thaliana protein match is: actin-related protein C2B (TAIR:AT2G33385.2); Has 407 Blast hits to 407 proteins in 172 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 133; Plants - 82; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|38037 : 180.0) no description available & (gnl|cdd|67653 : 163.0) no description available & (reliability: 842.0) & (original description: Putative ARPC2A, Description = Actin-related protein 2/3 complex subunit 2A, PFAM = PF04045)' T '31.1' 'cell.organisation' 'niben101scf03188_32384-37759' '(at5g67270 : 368.0) encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis.; end binding protein 1C (EB1C); CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), EB1, C-terminal (InterPro:IPR004953); BEST Arabidopsis thaliana protein match is: microtubule end binding protein EB1A (TAIR:AT3G47690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38210 : 254.0) no description available & (gnl|cdd|34814 : 132.0) no description available & (reliability: 736.0) & (original description: Putative EB1C, Description = Microtubule-associated protein RP/EB family member 1C, PFAM = PF00307;PF03271)' T '31.1' 'cell.organisation' 'niben101scf03274_177807-189164' '(at5g19940 : 266.0) Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); Has 21 Blast hits to 21 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 532.0) & (original description: Putative PAP8, Description = Probable plastid-lipid-associated protein 8, chloroplastic, PFAM = PF04755;PF04755)' T '31.1' 'cell.organisation' 'niben101scf03280_88474-99863' '(at5g65930 : 834.0) encodes a novel member of the kinesin superfamily of motor proteins. recessive mutations have reduced number of trichome branches.; ZWICHEL (ZWI); CONTAINS InterPro DOMAIN/s: FERM central domain (InterPro:IPR019748), Prismane-like (InterPro:IPR011254), MyTH4 domain (InterPro:IPR000857), Kinesin, motor domain (InterPro:IPR001752), Band 4.1 domain (InterPro:IPR019749), FERM, N-terminal (InterPro:IPR018979), Kinesin, motor region, conserved site (InterPro:IPR019821), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352), FERM domain (InterPro:IPR000299); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Kinesin motor domain (TAIR:AT2G22610.2). & (gnl|cdd|30088 : 444.0) no description available & (gnl|cdd|35460 : 396.0) no description available & (p46869|fla10_chlre : 213.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1668.0) & (original description: Putative Kin8, Description = Kinesin-like protein, PFAM = PF00155;PF00225;PF00784)' T '31.1' 'cell.organisation' 'niben101scf03287_46772-52467' '(at1g52240 : 161.0) Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily .; RHO guanyl-nucleotide exchange factor 11 (ROPGEF11); CONTAINS InterPro DOMAIN/s: Dynein light chain, type 1/2 (InterPro:IPR001372); BEST Arabidopsis thaliana protein match is: Dynein light chain type 1 family protein (TAIR:AT3G16120.1); Has 1254 Blast hits to 1252 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 666; Fungi - 103; Plants - 255; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|38640 : 123.0) no description available & (gnl|cdd|85315 : 99.6) no description available & (q39580|dyl1_chlre : 84.0) Dynein 8 kDa light chain, flagellar outer arm - Chlamydomonas reinhardtii & (reliability: 306.0) & (original description: Putative umc1060, Description = Dynein light chain LC6, flagellar outer arm, PFAM = PF01221)' T '31.1' 'cell.organisation' 'niben101scf03366_90725-107980' '(at3g23280 : 338.0) XB3 ortholog 5 in Arabidopsis thaliana (XBAT35); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 4 in Arabidopsis thaliana (TAIR:AT4G14365.1); Has 26382 Blast hits to 15025 proteins in 882 species: Archae - 61; Bacteria - 2221; Metazoa - 14003; Fungi - 1495; Plants - 1186; Viruses - 392; Other Eukaryotes - 7024 (source: NCBI BLink). & (gnl|cdd|29261 : 89.4) no description available & (reliability: 676.0) & (original description: Putative dl3220c, Description = XB3 in, putative isoform 1, PFAM = PF00023;PF00023;PF13920)' T '31.1' 'cell.organisation' 'niben101scf03373_475741-480472' '(at5g65020 : 437.0) Annexins are calcium binding proteins that are localized in the cytoplasm. When cytosolic Ca2+ increases, they relocate to the plasma membrane. They may be involved in the Golgi-mediated secretion of polysaccharides.; annexin 2 (ANNAT2); FUNCTIONS IN: calcium-dependent phospholipid binding, calcium ion binding; INVOLVED IN: polysaccharide transport, response to water deprivation, response to salt stress, response to cold, response to heat; LOCATED IN: cytosol, nucleus, cell surface; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464), Annexin, type plant (InterPro:IPR009118); BEST Arabidopsis thaliana protein match is: annexin 7 (TAIR:AT5G10230.1); Has 4555 Blast hits to 2244 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 3503; Fungi - 207; Plants - 559; Viruses - 0; Other Eukaryotes - 286 (source: NCBI BLink). & (gnl|cdd|36037 : 392.0) no description available & (p51074|anx4_fraan : 323.0) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (reliability: 874.0) & (original description: Putative ANN2, Description = Annexin D2, PFAM = PF00191;PF00191;PF00191;PF00191)' T '31.1' 'cell.organisation' 'niben101scf03374_114573-121695' '(at4g16520 : 204.0) autophagy 8f (ATG8F); CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT3G60640.1); Has 1518 Blast hits to 1516 proteins in 273 species: Archae - 0; Bacteria - 0; Metazoa - 724; Fungi - 178; Plants - 302; Viruses - 3; Other Eukaryotes - 311 (source: NCBI BLink). & (gnl|cdd|29162 : 186.0) no description available & (gnl|cdd|36867 : 184.0) no description available & (reliability: 380.0) & (original description: Putative ATG8F, Description = Autophagy-related protein 8f, PFAM = PF02991)' T '31.1' 'cell.organisation' 'niben101scf03419_1257247-1268940' '(at1g59540 : 811.0) Encodes a kinesin-like protein.; ZCF125; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30096 : 453.0) no description available & (gnl|cdd|35463 : 432.0) no description available & (p46869|fla10_chlre : 246.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1622.0) & (original description: Putative KIN7N, Description = Kinesin-like protein KIN-7N, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf03436_326771-332733' '(at1g12710 : 360.0) This gene is predicted to encode a protein with a PP2 domain. This domain in present in lectins found in squash and cucumber, suggesting that this protein could potentially have carbohydrate binding capabilities.; phloem protein 2-A12 (PP2-A12); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: phloem protein 2-A11 (TAIR:AT1G63090.1); Has 458 Blast hits to 452 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 456; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 720.0) & (original description: Putative P2A12, Description = F-box protein PP2-A12, PFAM = PF14299)' T '31.1' 'cell.organisation' 'niben101scf03450_152491-161618' '(at3g23280 : 419.0) XB3 ortholog 5 in Arabidopsis thaliana (XBAT35); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 4 in Arabidopsis thaliana (TAIR:AT4G14365.1); Has 26382 Blast hits to 15025 proteins in 882 species: Archae - 61; Bacteria - 2221; Metazoa - 14003; Fungi - 1495; Plants - 1186; Viruses - 392; Other Eukaryotes - 7024 (source: NCBI BLink). & (gnl|cdd|29261 : 92.8) no description available & (reliability: 838.0) & (original description: Putative XBAT35, Description = Putative E3 ubiquitin-protein ligase XBAT35, PFAM = PF13920;PF00023;PF13637)' T '31.1' 'cell.organisation' 'niben101scf03479_485527-502374' '(at3g18670 : 268.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G04700.1); Has 4772 Blast hits to 3121 proteins in 218 species: Archae - 7; Bacteria - 222; Metazoa - 2187; Fungi - 197; Plants - 1396; Viruses - 2; Other Eukaryotes - 761 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative At5g35810, Description = Ankyrin repeat family protein, PFAM = PF12796;PF13962)' T '31.1' 'cell.organisation' 'niben101scf03488_653078-659582' '(at4g14147 : 284.0) actin-related protein 2/3 complex 34kDa subunit family / arp2/3 complex 34kDa subunit family; ARPC4; CONTAINS InterPro DOMAIN/s: ARP23 complex 20kDa subunit (InterPro:IPR008384). & (gnl|cdd|37087 : 247.0) no description available & (gnl|cdd|69385 : 242.0) no description available & (reliability: 568.0) & (original description: Putative ARPC4, Description = Actin-related protein 2/3 complex subunit 4, PFAM = PF05856)' T '31.1' 'cell.organisation' 'niben101scf03488_830868-839574' '(at3g18670 : 123.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G04700.1); Has 4772 Blast hits to 3121 proteins in 218 species: Archae - 7; Bacteria - 222; Metazoa - 2187; Fungi - 197; Plants - 1396; Viruses - 2; Other Eukaryotes - 761 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative PGSC0003DMG400004656, Description = Ankyrin repeat-containing protein At3g12360 family, PFAM = PF13962;PF12796)' T '31.1' 'cell.organisation' 'niben101scf03488_830955-839837' '(at3g18670 : 123.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G04700.1); Has 4772 Blast hits to 3121 proteins in 218 species: Archae - 7; Bacteria - 222; Metazoa - 2187; Fungi - 197; Plants - 1396; Viruses - 2; Other Eukaryotes - 761 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative PGSC0003DMG400004656, Description = Ankyrin repeat-containing protein At3g12360 family, PFAM = PF13962;PF12796)' T '31.1' 'cell.organisation' 'niben101scf03491_100848-105751' '(at1g42550 : 706.0) Encodes a plant-specific protein of unknown function that appears to be conserved among angiosperms.; PLASTID MOVEMENT IMPAIRED1 (PMI1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chloroplast relocation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G20610.1); Has 1448 Blast hits to 1079 proteins in 174 species: Archae - 4; Bacteria - 103; Metazoa - 395; Fungi - 128; Plants - 164; Viruses - 85; Other Eukaryotes - 569 (source: NCBI BLink). & (reliability: 1412.0) & (original description: Putative PMI1, Description = Plastid movement impaired protein, PFAM = PF10358)' T '31.1' 'cell.organisation' 'niben101scf03494_1021993-1041263' '(at3g57890 : 788.0) Tubulin binding cofactor C domain-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CARP motif (InterPro:IPR006599), C-CAP/cofactor C-like domain (InterPro:IPR017901), Tubulin binding cofactor C (InterPro:IPR012945); BEST Arabidopsis thaliana protein match is: C-CAP/cofactor C-like domain-containing protein (TAIR:AT2G42230.2). & (gnl|cdd|39617 : 553.0) no description available & (gnl|cdd|87422 : 145.0) no description available & (reliability: 1526.0) & (original description: Putative TBCC, Description = Tublin binding cofactor C, PFAM = PF07986)' T '31.1' 'cell.organisation' 'niben101scf03577_174879-187703' '(at3g23670 : 1139.0) Microtubule motor kinesin PAKRP1L/Kinesin-12B. Together with PAKRP1/Kinesin-12A, serve as linkers of the plus ends of antiparallel microtubules in the phragmoplast.; KINESIN-12B; FUNCTIONS IN: microtubule motor activity, plus-end-directed microtubule motor activity; INVOLVED IN: phragmoplast assembly, microgametogenesis; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin-related protein (InterPro:IPR010544), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast-associated kinesin-related protein 1 (TAIR:AT4G14150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70035 : 538.0) no description available & (gnl|cdd|39481 : 375.0) no description available & (p46869|fla10_chlre : 229.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2278.0) & (original description: Putative KIN12B, Description = Kinesin-like protein KIN12B, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf03600_461752-466529' '(at3g01750 : 612.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G04140.1); Has 30372 Blast hits to 15038 proteins in 745 species: Archae - 53; Bacteria - 2422; Metazoa - 15116; Fungi - 2165; Plants - 2906; Viruses - 97; Other Eukaryotes - 7613 (source: NCBI BLink). & (gnl|cdd|29261 : 91.7) no description available & (reliability: 1224.0) & (original description: Putative Sb04g025150, Description = Putative uncharacterized protein Sb04g025150, PFAM = PF12796;PF13857)' T '31.1' 'cell.organisation' 'niben101scf03634_590918-597574' '(gnl|cdd|36037 : 190.0) no description available & (at2g38760 : 105.0) Annexins are calcium binding proteins that are localized in the cytoplasm. When cytosolic Ca2+ increases, they relocate to the plasma membrane.; annexin 3 (ANNAT3); FUNCTIONS IN: calcium-dependent phospholipid binding, calcium ion binding; INVOLVED IN: response to water deprivation, response to salt stress, response to cold, response to heat; LOCATED IN: vacuole, cell surface; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464); BEST Arabidopsis thaliana protein match is: annexin 8 (TAIR:AT5G12380.1); Has 3905 Blast hits to 2209 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 3079; Fungi - 145; Plants - 448; Viruses - 0; Other Eukaryotes - 233 (source: NCBI BLink). & (p51074|anx4_fraan : 98.2) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (reliability: 210.0) & (original description: Putative Ann3, Description = Annexin, PFAM = PF00191;PF00191;PF00191)' T '31.1' 'cell.organisation' 'niben101scf03638_60928-67862' '(at1g80480 : 421.0) plastid transcriptionally active 17 (PTAC17); LOCATED IN: plastid chromosome, chloroplast stroma, chloroplast, nucleoid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495), Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal (InterPro:IPR011629); BEST Arabidopsis thaliana protein match is: Cobalamin biosynthesis CobW-like protein (TAIR:AT1G15730.1); Has 22612 Blast hits to 14499 proteins in 1972 species: Archae - 190; Bacteria - 10146; Metazoa - 2946; Fungi - 801; Plants - 655; Viruses - 16; Other Eukaryotes - 7858 (source: NCBI BLink). & (gnl|cdd|37954 : 379.0) no description available & (gnl|cdd|30869 : 319.0) no description available & (reliability: 812.0) & (original description: Putative F7H2.7, Description = At1g15730/F7H2_7, PFAM = PF07683;PF02492)' T '31.1' 'cell.organisation' 'niben101scf03661_191342-194058' '(at1g47750 : 248.0) member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation.; peroxin 11A (PEX11A); CONTAINS InterPro DOMAIN/s: Peroxisomal biogenesis factor 11 (InterPro:IPR008733); BEST Arabidopsis thaliana protein match is: peroxin 11B (TAIR:AT3G47430.1); Has 271 Blast hits to 271 proteins in 59 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 15; Plants - 188; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|86907 : 148.0) no description available & (gnl|cdd|39388 : 98.1) no description available & (reliability: 496.0) & (original description: Putative PEX11A, Description = Peroxisomal membrane protein 11A, PFAM = PF05648)' T '31.1' 'cell.organisation' 'niben101scf03706_304841-315571' '(at2g47500 : 1140.0) P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 4 (TAIR:AT5G27000.1); Has 11938 Blast hits to 11443 proteins in 432 species: Archae - 0; Bacteria - 1; Metazoa - 5987; Fungi - 1397; Plants - 1883; Viruses - 0; Other Eukaryotes - 2670 (source: NCBI BLink). & (gnl|cdd|35460 : 476.0) no description available & (gnl|cdd|30088 : 449.0) no description available & (p46869|fla10_chlre : 202.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2280.0) & (original description: Putative kch2, Description = Kinesin-related protein, PFAM = PF00225;PF00307)' T '31.1' 'cell.organisation' 'niben101scf03710_1150559-1185899' '(at1g21730 : 848.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G06670.1); Has 16169 Blast hits to 14119 proteins in 580 species: Archae - 38; Bacteria - 464; Metazoa - 7403; Fungi - 1809; Plants - 2013; Viruses - 19; Other Eukaryotes - 4423 (source: NCBI BLink). & (gnl|cdd|30096 : 452.0) no description available & (gnl|cdd|35463 : 401.0) no description available & (p46869|fla10_chlre : 223.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1696.0) & (original description: Putative KIN7E, Description = Kinesin-like protein KIN-7E, chloroplastic, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf03710_1169170-1185959' '(at1g21730 : 434.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G06670.1); Has 16169 Blast hits to 14119 proteins in 580 species: Archae - 38; Bacteria - 464; Metazoa - 7403; Fungi - 1809; Plants - 2013; Viruses - 19; Other Eukaryotes - 4423 (source: NCBI BLink). & (gnl|cdd|30096 : 347.0) no description available & (gnl|cdd|35463 : 304.0) no description available & (p46869|fla10_chlre : 169.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 868.0) & (original description: Putative cenpe, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf03710_1177702-1181349' '(at1g21730 : 159.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G06670.1); Has 16169 Blast hits to 14119 proteins in 580 species: Archae - 38; Bacteria - 464; Metazoa - 7403; Fungi - 1809; Plants - 2013; Viruses - 19; Other Eukaryotes - 4423 (source: NCBI BLink). & (gnl|cdd|30096 : 141.0) no description available & (gnl|cdd|35463 : 139.0) no description available & (reliability: 318.0) & (original description: Putative kipA, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf03722_45191-54865' '(at3g45850 : 1290.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28620.1). & (gnl|cdd|35464 : 996.0) no description available & (o23826|k125_tobac : 782.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (gnl|cdd|30086 : 529.0) no description available & (reliability: 2580.0) & (original description: Putative KIN5D, Description = Kinesin-like protein KIN-5D, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf03733_709541-714005' '(at2g28840 : 624.0) XB3 ortholog 1 in Arabidopsis thaliana (XBAT31); FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 3 in Arabidopsis thaliana (TAIR:AT5G07270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29261 : 107.0) no description available & (gnl|cdd|35729 : 100.0) no description available & (reliability: 1248.0) & (original description: Putative XBAT31, Description = Putative E3 ubiquitin-protein ligase XBAT31, PFAM = PF12796;PF12796;PF00023)' T '31.1' 'cell.organisation' 'niben101scf03801_695339-710786' '(at2g26210 : 162.0) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110). & (reliability: 324.0) & (original description: Putative Sb02g039390, Description = Putative uncharacterized protein Sb02g039390, PFAM = PF13857;PF01363)' T '31.1' 'cell.organisation' 'niben101scf03805_115942-138689' '(at1g55550 : 484.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: mitochondrion; EXPRESSED IN: seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G27950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30088 : 405.0) no description available & (gnl|cdd|35460 : 326.0) no description available & (o23826|k125_tobac : 159.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 968.0) & (original description: Putative kifc3, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf03873_223200-228690' '(at2g38760 : 341.0) Annexins are calcium binding proteins that are localized in the cytoplasm. When cytosolic Ca2+ increases, they relocate to the plasma membrane.; annexin 3 (ANNAT3); FUNCTIONS IN: calcium-dependent phospholipid binding, calcium ion binding; INVOLVED IN: response to water deprivation, response to salt stress, response to cold, response to heat; LOCATED IN: vacuole, cell surface; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464); BEST Arabidopsis thaliana protein match is: annexin 8 (TAIR:AT5G12380.1); Has 3905 Blast hits to 2209 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 3079; Fungi - 145; Plants - 448; Viruses - 0; Other Eukaryotes - 233 (source: NCBI BLink). & (gnl|cdd|36037 : 312.0) no description available & (p51074|anx4_fraan : 259.0) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (reliability: 682.0) & (original description: Putative ANN3, Description = Annexin D3, PFAM = PF00191;PF00191;PF00191;PF00191)' T '31.1' 'cell.organisation' 'niben101scf03883_638537-645230' '(at5g04730 : 115.0) Ankyrin-repeat containing protein; BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G04700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative SDM1_28t00016, Description = Putative ankyrin repeat containing protein, identical, PFAM = PF13962;PF12796)' T '31.1' 'cell.organisation' 'niben101scf03930_559290-574431' '(at5g62500 : 372.0) encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis.; end binding protein 1B (EB1B); FUNCTIONS IN: microtubule binding; INVOLVED IN: thigmotropism, cytoskeleton organization, positive gravitropism; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), EB1, C-terminal (InterPro:IPR004953); BEST Arabidopsis thaliana protein match is: microtubule end binding protein EB1A (TAIR:AT3G47690.1); Has 1005 Blast hits to 968 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 581; Fungi - 144; Plants - 110; Viruses - 3; Other Eukaryotes - 167 (source: NCBI BLink). & (gnl|cdd|38210 : 250.0) no description available & (gnl|cdd|34814 : 128.0) no description available & (reliability: 744.0) & (original description: Putative EB1B, Description = Microtubule-associated protein RP/EB family member 1B, PFAM = PF03271;PF00307)' T '31.1' 'cell.organisation' 'niben101scf03937_217491-224379' '(at3g26070 : 215.0) Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT3G26080.1); Has 483 Blast hits to 479 proteins in 86 species: Archae - 0; Bacteria - 99; Metazoa - 0; Fungi - 0; Plants - 334; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|68332 : 111.0) no description available & (reliability: 430.0) & (original description: Putative PAP4, Description = AtPGL25, PFAM = PF04755)' T '31.1' 'cell.organisation' 'niben101scf03945_24440-27913' '(at1g01820 : 388.0) member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation.; peroxin 11c (PEX11C); CONTAINS InterPro DOMAIN/s: Peroxisomal biogenesis factor 11 (InterPro:IPR008733); BEST Arabidopsis thaliana protein match is: peroxin 11D (TAIR:AT2G45740.3); Has 289 Blast hits to 289 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 41; Plants - 179; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|39388 : 218.0) no description available & (gnl|cdd|86907 : 175.0) no description available & (reliability: 776.0) & (original description: Putative PEX11D, Description = Peroxisomal membrane protein 11D, PFAM = PF05648)' T '31.1' 'cell.organisation' 'niben101scf04015_214095-221964' '(at3g63480 : 501.0) ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast-associated kinesin-related protein 1 (TAIR:AT4G14150.1); Has 10148 Blast hits to 9733 proteins in 305 species: Archae - 0; Bacteria - 0; Metazoa - 4474; Fungi - 1347; Plants - 1834; Viruses - 0; Other Eukaryotes - 2493 (source: NCBI BLink). & (gnl|cdd|30091 : 391.0) no description available & (gnl|cdd|35461 : 338.0) no description available & (p46869|fla10_chlre : 196.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1002.0) & (original description: Putative KIN1, Description = Kinesin-like protein KIN-1, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf04021_745029-810084' '(at1g01820 : 373.0) member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation.; peroxin 11c (PEX11C); CONTAINS InterPro DOMAIN/s: Peroxisomal biogenesis factor 11 (InterPro:IPR008733); BEST Arabidopsis thaliana protein match is: peroxin 11D (TAIR:AT2G45740.3); Has 289 Blast hits to 289 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 41; Plants - 179; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|39388 : 216.0) no description available & (gnl|cdd|86907 : 171.0) no description available & (reliability: 746.0) & (original description: Putative PEX11C, Description = Peroxisomal membrane protein 11C, PFAM = PF05648)' T '31.1' 'cell.organisation' 'niben101scf04028_334651-351410' '(at1g35720 : 120.0) Encodes a member of the annexin gene family, a diverse, multigene family of calcium-dependent, membrane-binding proteins. The protein was determined to have peroxidase activity. This activity is thought to be dependent on the presence of post-translational modifications (most likely phosphorylation). The protein was shown to be present as a mixture of monomer and homodimer. The homodimerization seems to be dependent on the presence of Ca2+ or H2O2. The dimerization was prevented by the addition of DTT, β-mercaptoethanol and TCEP. Annat1 mRNA is expressed in flowers, roots,leaves and stems and is most abundant in stems. mRNA levels are increased in response to oxidative stress. Developmental expression patterns suggest a role in Golgi-mediated polysaccharide secretion.; annexin 1 (ANNAT1); FUNCTIONS IN: in 7 functions; INVOLVED IN: in 8 processes; LOCATED IN: in 10 components; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464), Annexin, type plant (InterPro:IPR009118); BEST Arabidopsis thaliana protein match is: annexin 2 (TAIR:AT5G65020.1); Has 3809 Blast hits to 2217 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 2893; Fungi - 160; Plants - 482; Viruses - 0; Other Eukaryotes - 274 (source: NCBI BLink). & (gnl|cdd|36037 : 104.0) no description available & (p51074|anx4_fraan : 89.7) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (reliability: 240.0) & (original description: Putative an34, Description = Annexin, PFAM = PF00191)' T '31.1' 'cell.organisation' 'niben101scf04040_1030045-1033649' '(at4g10720 : 152.0) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G54620.1); Has 21804 Blast hits to 10802 proteins in 484 species: Archae - 19; Bacteria - 1454; Metazoa - 11942; Fungi - 1177; Plants - 2277; Viruses - 52; Other Eukaryotes - 4883 (source: NCBI BLink). & (gnl|cdd|35730 : 90.1) no description available & (gnl|cdd|29261 : 86.7) no description available & (reliability: 304.0) & (original description: Putative ORF33, Description = Ankyrin repeat family protein, PFAM = PF13637;PF13962;PF12796;PF12796)' T '31.1' 'cell.organisation' 'niben101scf04052_31234-45995' '(gnl|cdd|36037 : 299.0) no description available & (at1g68090 : 295.0) Encodes a calcium-binding protein annexin (AnnAt5).; annexin 5 (ANN5); FUNCTIONS IN: calcium-dependent phospholipid binding, calcium ion binding; INVOLVED IN: response to red or far red light, response to water deprivation, response to salt stress, response to cold, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464); BEST Arabidopsis thaliana protein match is: annexin 7 (TAIR:AT5G10230.1); Has 4912 Blast hits to 2269 proteins in 210 species: Archae - 0; Bacteria - 0; Metazoa - 3806; Fungi - 262; Plants - 507; Viruses - 0; Other Eukaryotes - 337 (source: NCBI BLink). & (p51074|anx4_fraan : 146.0) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (reliability: 590.0) & (original description: Putative ANN5, Description = Annexin D5, PFAM = PF00191;PF00191;PF00191;PF00191)' T '31.1' 'cell.organisation' 'niben101scf04083_276469-286764' '(at5g53080 : 471.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37051 : 199.0) no description available & (reliability: 942.0) & (original description: Putative RCOM_0642950, Description = Kinesin light chain, putative, PFAM = PF13374;PF13424;PF13424)' T '31.1' 'cell.organisation' 'niben101scf04096_773125-780977' '(at5g07270 : 676.0) XB3 ortholog 3 in Arabidopsis thaliana (XBAT33); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 53429 Blast hits to 23032 proteins in 965 species: Archae - 65; Bacteria - 4348; Metazoa - 27793; Fungi - 4781; Plants - 2636; Viruses - 380; Other Eukaryotes - 13426 (source: NCBI BLink). & (gnl|cdd|35729 : 96.2) no description available & (gnl|cdd|29261 : 94.0) no description available & (reliability: 1352.0) & (original description: Putative XBAT33, Description = E3 ubiquitin-protein ligase XBAT33, PFAM = PF12796;PF00023;PF13857)' T '31.1' 'cell.organisation' 'niben101scf04113_1777583-1781384' '(at1g47270 : 368.0) Member of TLP family; tubby like protein 6 (TLP6); FUNCTIONS IN: phosphoric diester hydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 2 (TAIR:AT2G18280.2). & (gnl|cdd|37713 : 320.0) no description available & (gnl|cdd|85281 : 232.0) no description available & (reliability: 684.0) & (original description: Putative TULP1, Description = Tubby-like F-box protein, PFAM = PF00646;PF01167)' T '31.1' 'cell.organisation' 'niben101scf04156_55240-62357' '(at5g53080 : 469.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37051 : 201.0) no description available & (reliability: 938.0) & (original description: Putative RCOM_0642950, Description = Kinesin light chain, putative, PFAM = PF13424;PF13424;PF13424;PF13374)' T '31.1' 'cell.organisation' 'niben101scf04191_490708-494210' '(at5g35830 : 112.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G54070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative PGSC0003DMG400010430, Description = Ankyrin repeat-containing protein, PFAM = )' T '31.1' 'cell.organisation' 'niben101scf04339_959907-966862' '(at2g05630 : 127.0) in the Arabidopsis autophagy pathway; ATG8D; FUNCTIONS IN: microtubule binding; INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT1G62040.2); Has 1504 Blast hits to 1502 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 717; Fungi - 172; Plants - 303; Viruses - 3; Other Eukaryotes - 309 (source: NCBI BLink). & (gnl|cdd|29162 : 117.0) no description available & (gnl|cdd|36867 : 114.0) no description available & (reliability: 254.0) & (original description: Putative apg8, Description = Autophagy-related protein, PFAM = PF02991;PF02991)' T '31.1' 'cell.organisation' 'niben101scf04383_110318-114171' '(at3g18950 : 464.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G49450.1); Has 30107 Blast hits to 16274 proteins in 601 species: Archae - 20; Bacteria - 4381; Metazoa - 11289; Fungi - 6965; Plants - 3765; Viruses - 0; Other Eukaryotes - 3687 (source: NCBI BLink). & (gnl|cdd|29257 : 127.0) no description available & (gnl|cdd|35495 : 82.8) no description available & (reliability: 844.0) & (original description: Putative wdrp, Description = WD-40 repeat family protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '31.1' 'cell.organisation' 'niben101scf04384_57085-64057' '(at4g27430 : 369.0) Positive regulator of light-regulated genes. Novel nuclear protein which requires light for its high level expression.; COP1-interacting protein 7 (CIP7); FUNCTIONS IN: transcription activator activity; INVOLVED IN: chlorophyll biosynthetic process, response to light stimulus, anthocyanin biosynthetic process; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR class), putative (TAIR:AT1G61100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 738.0) & (original description: Putative)' T '31.1' 'cell.organisation' 'niben101scf04384_395006-427955' '(at2g35630 : 1475.0) Member of the MAP215 family of microtubule-associated proteins required to establish interphase arrays of cortical microtubules.Mutants have defects in cytokinesis during pollen development. Vegetative phenotypes observed in temperature sensitive mutants include left-handed organ twisting, isotropic cell expansion and impairment of root hair polarity.; MICROTUBULE ORGANIZATION 1 (MOR1); CONTAINS InterPro DOMAIN/s: HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28155.1); Has 1070 Blast hits to 718 proteins in 196 species: Archae - 0; Bacteria - 4; Metazoa - 490; Fungi - 304; Plants - 106; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|37031 : 374.0) no description available & (reliability: 2950.0) & (original description: Putative GEM1, Description = Protein MOR1, PFAM = PF12348)' T '31.1' 'cell.organisation' 'niben101scf04396_354658-359799' '(at5g27950 : 609.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G55550.1); Has 10282 Blast hits to 9806 proteins in 314 species: Archae - 0; Bacteria - 8; Metazoa - 4569; Fungi - 1388; Plants - 1826; Viruses - 0; Other Eukaryotes - 2491 (source: NCBI BLink). & (gnl|cdd|30088 : 413.0) no description available & (gnl|cdd|35460 : 302.0) no description available & (p46869|fla10_chlre : 151.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1218.0) & (original description: Putative TBK5, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf04446_77426-83555' '(at1g62040 : 209.0) autophagy 8c (ATG8C); FUNCTIONS IN: microtubule binding; INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G21980.2). & (gnl|cdd|36867 : 186.0) no description available & (gnl|cdd|29162 : 185.0) no description available & (reliability: 392.0) & (original description: Putative ATG8D, Description = Autophagy-related protein 8d, PFAM = PF02991)' T '31.1' 'cell.organisation' 'niben101scf04446_77465-107646' '(at1g62040 : 119.0) autophagy 8c (ATG8C); FUNCTIONS IN: microtubule binding; INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G21980.2). & (gnl|cdd|79982 : 111.0) no description available & (gnl|cdd|36867 : 110.0) no description available & (reliability: 234.0) & (original description: Putative atg8, Description = Autophagy-related protein, PFAM = PF02991)' T '31.1' 'cell.organisation' 'niben101scf04487_460478-464650' '(p51074|anx4_fraan : 375.0) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (at5g12380 : 338.0) annexin 8 (ANNAT8); FUNCTIONS IN: calcium-dependent phospholipid binding, calcium ion binding; INVOLVED IN: response to water deprivation, response to salt stress, response to cold, response to heat; EXPRESSED IN: embryo, pedicel, synergid; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464), Annexin, type plant (InterPro:IPR009118); BEST Arabidopsis thaliana protein match is: annexin 7 (TAIR:AT5G10230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36037 : 285.0) no description available & (reliability: 676.0) & (original description: Putative AnnAh6, Description = Annexin, PFAM = PF00191;PF00191;PF00191;PF00191)' T '31.1' 'cell.organisation' 'niben101scf04494_97796-100072' '(at1g52240 : 161.0) Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily .; RHO guanyl-nucleotide exchange factor 11 (ROPGEF11); CONTAINS InterPro DOMAIN/s: Dynein light chain, type 1/2 (InterPro:IPR001372); BEST Arabidopsis thaliana protein match is: Dynein light chain type 1 family protein (TAIR:AT3G16120.1); Has 1254 Blast hits to 1252 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 666; Fungi - 103; Plants - 255; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (gnl|cdd|38640 : 120.0) no description available & (gnl|cdd|85315 : 95.0) no description available & (q39580|dyl1_chlre : 80.1) Dynein 8 kDa light chain, flagellar outer arm - Chlamydomonas reinhardtii & (reliability: 300.0) & (original description: Putative BnaC05g37270D, Description = BnaC05g37270D protein, PFAM = PF01221)' T '31.1' 'cell.organisation' 'niben101scf04585_52375-61936' '(at1g13180 : 774.0) Mutant has defect in trichome cell expansion and actin organization resulting in a distorted trichome phenotype.; DISTORTED TRICHOMES 1 (DIS1); FUNCTIONS IN: actin binding, structural constituent of cytoskeleton, ATP binding; INVOLVED IN: actin filament organization, multidimensional cell growth, cell morphogenesis, trichome morphogenesis; LOCATED IN: Arp2/3 protein complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000), Actin-related protein 3 (InterPro:IPR015623); BEST Arabidopsis thaliana protein match is: Actin-like ATPase superfamily protein (TAIR:AT2G42100.1); Has 12406 Blast hits to 12242 proteins in 2483 species: Archae - 6; Bacteria - 5; Metazoa - 5339; Fungi - 3178; Plants - 1454; Viruses - 2; Other Eukaryotes - 2422 (source: NCBI BLink). & (gnl|cdd|35897 : 615.0) no description available & (gnl|cdd|28896 : 413.0) no description available & (p53498|act_chlre : 236.0) Actin - Chlamydomonas reinhardtii & (reliability: 1548.0) & (original description: Putative ARP3, Description = Actin-related protein 3, PFAM = PF00022)' T '31.1' 'cell.organisation' 'niben101scf04654_265528-269859' '(at1g70140 : 481.0) Encodes a group I formin. Binds to F-actin barbed ends. Has severing actin filaments activity. Binds profilin. Involved in the initiation and tip growth of root hairs through regulation of actin cytoskeleton.; formin 8 (FH8); FUNCTIONS IN: actin binding, profilin binding, actin filament binding; INVOLVED IN: actin nucleation, cell tip growth; LOCATED IN: cell-cell junction, plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin homologue 4 (TAIR:AT1G24150.1); Has 22376 Blast hits to 12386 proteins in 831 species: Archae - 31; Bacteria - 2621; Metazoa - 7710; Fungi - 2231; Plants - 6132; Viruses - 1038; Other Eukaryotes - 2613 (source: NCBI BLink). & (gnl|cdd|85898 : 327.0) no description available & (gnl|cdd|37133 : 286.0) no description available & (reliability: 962.0) & (original description: Putative FH4, Description = Formin-like protein 4, PFAM = PF02181)' T '31.1' 'cell.organisation' 'niben101scf04664_402238-414721' '(at4g39050 : 1135.0) Kinesin motor family protein; FUNCTIONS IN: microtubule motor activity, zinc ion binding, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Zinc finger, RING-type (InterPro:IPR001841), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: Kinesin motor family protein (TAIR:AT2G21380.1); Has 46191 Blast hits to 32952 proteins in 1570 species: Archae - 362; Bacteria - 3539; Metazoa - 22005; Fungi - 4349; Plants - 4299; Viruses - 335; Other Eukaryotes - 11302 (source: NCBI BLink). & (gnl|cdd|35463 : 464.0) no description available & (gnl|cdd|30096 : 463.0) no description available & (p46869|fla10_chlre : 219.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2270.0) & (original description: Putative kif11, Description = Kinesin-like protein, PFAM = PF13920;PF00225)' T '31.1' 'cell.organisation' 'niben101scf04706_203858-239300' '(at5g65460 : 1572.0) Kinesin that binds cyclin-dependent kinase CDKA;1 as homodimer or as heterodimer with KCA1; kinesin like protein for actin based chloroplast movement 2 (KAC2); FUNCTIONS IN: microtubule binding, protein binding, microtubule motor activity; INVOLVED IN: chloroplast avoidance movement, chloroplast accumulation movement; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin like protein for actin based chloroplast movement 1 (TAIR:AT5G10470.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30088 : 291.0) no description available & (gnl|cdd|35460 : 279.0) no description available & (o23826|k125_tobac : 129.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 3144.0) & (original description: Putative KCA2, Description = Kinesin-like protein KCA2, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf04712_37294-48965' '(at2g14680 : 420.0) maternal effect embryo arrest 13 (MEE13); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages. & (reliability: 840.0) & (original description: Putative MEE13, Description = Myosin heavy chain-related protein, PFAM = )' T '31.1' 'cell.organisation' 'niben101scf04760_24801-33570' '(at1g18450 : 360.0) Encodes a gene similar to actin-related proteins in other organisms. Member of nuclear ARP family of genes. Component of chromatin remodeling complexes, involved in chromatin-mediated gene regulation. Phenotype of the arp4-1 mutant allele revealed partial sterility due to defects in anther development. Targeting the distinct, 3' UTR of AtARP4 transcripts with RNA interference caused a drastic reduction in the level of AtARP4 protein expression, and resulted in strong pleiotropic phenotypes such as altered organization of plant organs, early flowering, delayed flower senescence and high levels of sterility. Western blot analysis and immunolabelling demonstrated a clear correlation between reductions in the level of AtARP4 expression and severity of the phenotypes.; actin-related protein 4 (ARP4); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: long-day photoperiodism, flowering, chromatin organization, pollen sperm cell differentiation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: actin-11 (TAIR:AT3G12110.1); Has 13669 Blast hits to 13362 proteins in 2792 species: Archae - 2; Bacteria - 480; Metazoa - 5593; Fungi - 3430; Plants - 1457; Viruses - 2; Other Eukaryotes - 2705 (source: NCBI BLink). & (gnl|cdd|35898 : 265.0) no description available & (gnl|cdd|84448 : 231.0) no description available & (p30167|act3_soltu : 147.0) Actin-58 - Solanum tuberosum (Potato) & (reliability: 720.0) & (original description: Putative act, Description = Actin, PFAM = PF00022)' T '31.1' 'cell.organisation' 'niben101scf04760_25044-45933' '(at1g18450 : 693.0) Encodes a gene similar to actin-related proteins in other organisms. Member of nuclear ARP family of genes. Component of chromatin remodeling complexes, involved in chromatin-mediated gene regulation. Phenotype of the arp4-1 mutant allele revealed partial sterility due to defects in anther development. Targeting the distinct, 3' UTR of AtARP4 transcripts with RNA interference caused a drastic reduction in the level of AtARP4 protein expression, and resulted in strong pleiotropic phenotypes such as altered organization of plant organs, early flowering, delayed flower senescence and high levels of sterility. Western blot analysis and immunolabelling demonstrated a clear correlation between reductions in the level of AtARP4 expression and severity of the phenotypes.; actin-related protein 4 (ARP4); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: long-day photoperiodism, flowering, chromatin organization, pollen sperm cell differentiation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: actin-11 (TAIR:AT3G12110.1); Has 13669 Blast hits to 13362 proteins in 2792 species: Archae - 2; Bacteria - 480; Metazoa - 5593; Fungi - 3430; Plants - 1457; Viruses - 2; Other Eukaryotes - 2705 (source: NCBI BLink). & (gnl|cdd|35898 : 534.0) no description available & (gnl|cdd|84448 : 491.0) no description available & (p20904|act_volca : 287.0) Actin - Volvox carteri & (reliability: 1386.0) & (original description: Putative ARP4, Description = Actin-related protein 4, PFAM = PF00022)' T '31.1' 'cell.organisation' 'niben101scf04767_78733-94104' '(at4g39050 : 1208.0) Kinesin motor family protein; FUNCTIONS IN: microtubule motor activity, zinc ion binding, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Zinc finger, RING-type (InterPro:IPR001841), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: Kinesin motor family protein (TAIR:AT2G21380.1); Has 46191 Blast hits to 32952 proteins in 1570 species: Archae - 362; Bacteria - 3539; Metazoa - 22005; Fungi - 4349; Plants - 4299; Viruses - 335; Other Eukaryotes - 11302 (source: NCBI BLink). & (gnl|cdd|30096 : 456.0) no description available & (gnl|cdd|35463 : 454.0) no description available & (p46869|fla10_chlre : 214.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2416.0) & (original description: Putative KIN7D, Description = Kinesin-like protein KIN-7D, mitochondrial, PFAM = PF13920;PF00225)' T '31.1' 'cell.organisation' 'niben101scf04787_375431-379160' '(at3g18950 : 461.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G49450.1); Has 30107 Blast hits to 16274 proteins in 601 species: Archae - 20; Bacteria - 4381; Metazoa - 11289; Fungi - 6965; Plants - 3765; Viruses - 0; Other Eukaryotes - 3687 (source: NCBI BLink). & (gnl|cdd|29257 : 118.0) no description available & (gnl|cdd|35495 : 81.3) no description available & (reliability: 848.0) & (original description: Putative wdrp, Description = WD-40 repeat family protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '31.1' 'cell.organisation' 'niben101scf04813_202587-225232' '(at1g01950 : 1051.0) Encodes a member of the armadillo/beta-catenin repeat kinesin motor family. Mutants have twisted roots due to abnormal cell file rotation; the phenotype is dependent on microtubules.; armadillo repeat kinesin 2 (ARK2); FUNCTIONS IN: microtubule motor activity, binding, ATP binding; INVOLVED IN: root development; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: armadillo repeat kinesin 3 (TAIR:AT1G12430.1); Has 18598 Blast hits to 15978 proteins in 689 species: Archae - 52; Bacteria - 737; Metazoa - 7861; Fungi - 1903; Plants - 2828; Viruses - 15; Other Eukaryotes - 5202 (source: NCBI BLink). & (gnl|cdd|35461 : 350.0) no description available & (gnl|cdd|84623 : 328.0) no description available & (p46869|fla10_chlre : 189.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2102.0) & (original description: Putative ARK2, Description = Armadillo repeat-containing kinesin-like protein 2, PFAM = PF00514;PF00225)' T '31.1' 'cell.organisation' 'niben101scf04905_299766-305114' '(at3g01750 : 523.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G04140.1); Has 30372 Blast hits to 15038 proteins in 745 species: Archae - 53; Bacteria - 2422; Metazoa - 15116; Fungi - 2165; Plants - 2906; Viruses - 97; Other Eukaryotes - 7613 (source: NCBI BLink). & (gnl|cdd|29261 : 92.1) no description available & (gnl|cdd|35729 : 90.1) no description available & (reliability: 1046.0) & (original description: Putative Os02g0601700, Description = Ankyrin repeat-like protein, PFAM = PF13857;PF12796)' T '31.1' 'cell.organisation' 'niben101scf04918_312339-317983' '(at1g60430 : 323.0) actin-related protein C3 (ARPC3); CONTAINS InterPro DOMAIN/s: ARP2/3 complex, p21-Arc subunit (InterPro:IPR007204); Has 457 Blast hits to 457 proteins in 188 species: Archae - 0; Bacteria - 0; Metazoa - 232; Fungi - 135; Plants - 39; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (gnl|cdd|67669 : 249.0) no description available & (gnl|cdd|38365 : 237.0) no description available & (reliability: 646.0) & (original description: Putative ARPC3, Description = Actin-related protein 2/3 complex subunit 3, PFAM = PF04062)' T '31.1' 'cell.organisation' 'niben101scf04953_1296460-1302296' '(at2g37080 : 255.0) ROP interactive partner 3 (RIP3); LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: ROP interactive partner 4 (TAIR:AT3G53350.1); Has 147635 Blast hits to 77239 proteins in 3391 species: Archae - 1987; Bacteria - 30902; Metazoa - 62424; Fungi - 12574; Plants - 8109; Viruses - 683; Other Eukaryotes - 30956 (source: NCBI BLink). & (reliability: 510.0) & (original description: Putative p70, Description = P70 protein, PFAM = )' T '31.1' 'cell.organisation' 'niben101scf04980_3046-40059' '(at2g35490 : 299.0) Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: fibrillin (TAIR:AT4G04020.1); Has 422 Blast hits to 421 proteins in 82 species: Archae - 0; Bacteria - 91; Metazoa - 1; Fungi - 0; Plants - 314; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (q9zp40|pg1_pea : 298.0) Plastoglobulin-1, chloroplast precursor - Pisum sativum (Garden pea) & (gnl|cdd|68332 : 186.0) no description available & (reliability: 598.0) & (original description: Putative CHRC, Description = Plastid lipid-associated protein 3, chloroplastic, PFAM = PF04755)' T '31.1' 'cell.organisation' 'niben101scf05014_128815-131847' '(at5g20110 : 125.0) Dynein light chain type 1 family protein; FUNCTIONS IN: microtubule motor activity; INVOLVED IN: microtubule-based process; LOCATED IN: microtubule associated complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Dynein light chain, type 1/2 (InterPro:IPR001372); BEST Arabidopsis thaliana protein match is: Dynein light chain type 1 family protein (TAIR:AT1G23220.1); Has 1201 Blast hits to 1201 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 594; Fungi - 104; Plants - 259; Viruses - 0; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|38640 : 98.4) no description available & (reliability: 250.0) & (original description: Putative vfPIP, Description = Dynein light chain, PFAM = PF01221)' T '31.1' 'cell.organisation' 'niben101scf05035_218277-224682' '(at3g24530 : 731.0) AAA-type ATPase family protein / ankyrin repeat family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Ankyrin repeat-containing domain (InterPro:IPR020683), CbxX/CfqX (InterPro:IPR000641), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 1 in Arabidopsis thaliana (TAIR:AT2G28840.1); Has 62125 Blast hits to 27268 proteins in 1602 species: Archae - 369; Bacteria - 7189; Metazoa - 29752; Fungi - 5124; Plants - 2920; Viruses - 566; Other Eukaryotes - 16205 (source: NCBI BLink). & (gnl|cdd|35949 : 178.0) no description available & (gnl|cdd|29261 : 100.0) no description available & (reliability: 1462.0) & (original description: Putative v1g62711, Description = Predicted protein, PFAM = PF00023;PF12796;PF00004)' T '31.1' 'cell.organisation' 'niben101scf05077_64241-78206' '(at3g44050 : 936.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast orienting kinesin 2 (TAIR:AT3G19050.1); Has 120776 Blast hits to 67955 proteins in 2875 species: Archae - 1602; Bacteria - 19178; Metazoa - 52262; Fungi - 9870; Plants - 7347; Viruses - 361; Other Eukaryotes - 30156 (source: NCBI BLink). & (gnl|cdd|30095 : 473.0) no description available & (gnl|cdd|39481 : 377.0) no description available & (p46869|fla10_chlre : 231.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1872.0) & (original description: Putative TBK7, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf05107_48999-56173' '(at1g51110 : 491.0) Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: Plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT3G26070.1); Has 329 Blast hits to 327 proteins in 75 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi - 0; Plants - 242; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|68332 : 138.0) no description available & (reliability: 982.0) & (original description: Putative PAP12, Description = Probable plastid-lipid-associated protein 12, chloroplastic, PFAM = PF04755)' T '31.1' 'cell.organisation' 'niben101scf05111_178693-181763' '(at2g21950 : 323.0) Encodes an SKP1 interacting partner (SKIP6).; SKP1 interacting partner 6 (SKIP6); CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT4G39550.1); Has 5633 Blast hits to 4259 proteins in 231 species: Archae - 10; Bacteria - 283; Metazoa - 3617; Fungi - 16; Plants - 1462; Viruses - 63; Other Eukaryotes - 182 (source: NCBI BLink). & (gnl|cdd|39642 : 103.0) no description available & (reliability: 646.0) & (original description: Putative SKIP6, Description = F-box/kelch-repeat protein SKIP6, PFAM = PF01344;PF01344;PF00646)' T '31.1' 'cell.organisation' 'niben101scf05118_545823-556535' '(at1g14000 : 303.0) Encodes a protein with similarity to members of the C1 subgroup of MAP kinase kinase kinases. Interacts physically with the receptor kinase BRL2/VH1 and appears to be involved in auxin and brassinosteriod signaling.; VH1-interacting kinase (VIK); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G58760.1); Has 139285 Blast hits to 133759 proteins in 5118 species: Archae - 180; Bacteria - 15286; Metazoa - 53967; Fungi - 12530; Plants - 33711; Viruses - 527; Other Eukaryotes - 23084 (source: NCBI BLink). & (gnl|cdd|35413 : 233.0) no description available & (gnl|cdd|29142 : 214.0) no description available & (q8l4h4|nork_medtr : 117.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 602.0) & (original description: Putative Sb02g040300, Description = Putative uncharacterized protein Sb02g040300, PFAM = PF07714;PF12796)' T '31.1' 'cell.organisation' 'niben101scf05124_55378-60650' '(at1g52080 : 231.0) unknown function; AR791; FUNCTIONS IN: actin binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Hydroxyproline-rich glycoprotein family protein (TAIR:AT3G25690.2); Has 24282 Blast hits to 16377 proteins in 1084 species: Archae - 431; Bacteria - 1887; Metazoa - 12444; Fungi - 1813; Plants - 1044; Viruses - 150; Other Eukaryotes - 6513 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative AR791, Description = CHUP1-like protein, PFAM = )' T '31.1' 'cell.organisation' 'niben101scf05231_206779-216490' '(at3g16630 : 947.0) Kinesin-13A localized to entire Golgi stacks. Involved in trichome development.; KINESIN-13A; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: trichome morphogenesis; LOCATED IN: Golgi stack, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT3G16060.1); Has 9814 Blast hits to 9502 proteins in 306 species: Archae - 4; Bacteria - 2; Metazoa - 4282; Fungi - 1345; Plants - 1799; Viruses - 0; Other Eukaryotes - 2382 (source: NCBI BLink). & (gnl|cdd|35467 : 560.0) no description available & (gnl|cdd|30089 : 478.0) no description available & (p46869|fla10_chlre : 158.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1894.0) & (original description: Putative kif2, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf05298_702409-709447' '(p51074|anx4_fraan : 387.0) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (at5g12380 : 352.0) annexin 8 (ANNAT8); FUNCTIONS IN: calcium-dependent phospholipid binding, calcium ion binding; INVOLVED IN: response to water deprivation, response to salt stress, response to cold, response to heat; EXPRESSED IN: embryo, pedicel, synergid; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464), Annexin, type plant (InterPro:IPR009118); BEST Arabidopsis thaliana protein match is: annexin 7 (TAIR:AT5G10230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36037 : 301.0) no description available & (reliability: 704.0) & (original description: Putative an34, Description = Annexin, PFAM = PF00191;PF00191;PF00191;PF00191)' T '31.1' 'cell.organisation' 'niben101scf05310_35920-39960' '(at1g25280 : 593.0) Member of TLP family; tubby like protein 10 (TLP10); FUNCTIONS IN: phosphoric diester hydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 5 (TAIR:AT1G43640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37713 : 445.0) no description available & (gnl|cdd|85281 : 343.0) no description available & (reliability: 1186.0) & (original description: Putative TULP14, Description = Tubby-like F-box protein 14, PFAM = PF01167;PF00646)' T '31.1' 'cell.organisation' 'niben101scf05316_169265-174118' '(at2g02240 : 254.0) maternal effect embryo arrest 66 (MEE66); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B2 (TAIR:AT2G02250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 508.0) & (original description: Putative At2g02240, Description = F-box protein At2g02240, PFAM = PF14299)' T '31.1' 'cell.organisation' 'niben101scf05554_626840-675425' '(at5g18410 : 2128.0) distorted trichomes and exhibits a diffuse actin cytoskeleton; PIROGI 121 (PIR121); FUNCTIONS IN: transcription activator activity; INVOLVED IN: actin nucleation, trichome morphogenesis, actin cytoskeleton organization; LOCATED IN: SCAR complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytoplasmic FMR1-interacting (InterPro:IPR008081); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69514 : 584.0) no description available & (gnl|cdd|38742 : 583.0) no description available & (reliability: 4256.0) & (original description: Putative PIR, Description = Protein PIR, PFAM = PF05994;PF07159)' T '31.1' 'cell.organisation' 'niben101scf05645_670413-673087' '(at3g47430 : 267.0) member of the peroxin11 (PEX11) gene family, located on the peroxisome membrane, controls peroxisome proliferation.; peroxin 11B (PEX11B); CONTAINS InterPro DOMAIN/s: Peroxisomal biogenesis factor 11 (InterPro:IPR008733); BEST Arabidopsis thaliana protein match is: peroxin 11A (TAIR:AT1G47750.1); Has 320 Blast hits to 320 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 77; Fungi - 85; Plants - 134; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|86907 : 193.0) no description available & (gnl|cdd|39388 : 176.0) no description available & (reliability: 534.0) & (original description: Putative PEX11B, Description = Peroxisomal biogenesis factor 11 family protein, PFAM = PF05648)' T '31.1' 'cell.organisation' 'niben101scf05674_655096-658535' '(at3g50390 : 492.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G26490.1); Has 33178 Blast hits to 17374 proteins in 678 species: Archae - 38; Bacteria - 5184; Metazoa - 12049; Fungi - 7688; Plants - 3936; Viruses - 0; Other Eukaryotes - 4283 (source: NCBI BLink). & (gnl|cdd|29257 : 143.0) no description available & (gnl|cdd|35487 : 96.4) no description available & (reliability: 984.0) & (original description: Putative wdrp, Description = WD-40 repeat family protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '31.1' 'cell.organisation' 'niben101scf05711_507231-526471' '(at3g12020 : 1019.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G06670.1). & (gnl|cdd|30096 : 453.0) no description available & (gnl|cdd|35463 : 375.0) no description available & (p46869|fla10_chlre : 219.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2038.0) & (original description: Putative KIN7K, Description = Kinesin-like protein KIN-7K, chloroplastic, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf05732_103517-109296' '(at3g26070 : 153.0) Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT3G26080.1); Has 483 Blast hits to 479 proteins in 86 species: Archae - 0; Bacteria - 99; Metazoa - 0; Fungi - 0; Plants - 334; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|68332 : 81.6) no description available & (reliability: 306.0) & (original description: Putative PAP4, Description = AtPGL25, PFAM = PF04755)' T '31.1' 'cell.organisation' 'niben101scf05791_83110-111709' '(at5g47820 : 1193.0) encodes a kinesin-like protein with an N-terminal microtubule binding motor domain. Protein is localized to the periphery of the cytoplasm and mutants in the gene exhibit altered orientation of cellulose microfibrils and reduced mechanical strength of fibers.; FRAGILE FIBER 1 (FRA1); CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT3G50240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30094 : 510.0) no description available & (gnl|cdd|35465 : 438.0) no description available & (p46869|fla10_chlre : 241.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2386.0) & (original description: Putative KIN4A, Description = Kinesin-like protein KIN-4A, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf05818_106673-110806' '(q9st98|prof3_tobac : 234.0) Profilin-3 - Nicotiana tabacum (Common tobacco) & (at2g19770 : 196.0) Encodes profilin 5, originally named profilin 4 (PRO4/PFN4). Low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton. Pollen-specific plant profilin present predominantly in mature pollen and growing pollen tubes.; profilin 5 (PRF5); CONTAINS InterPro DOMAIN/s: Profilin/allergen (InterPro:IPR002097), Profilin, plant (InterPro:IPR005455); BEST Arabidopsis thaliana protein match is: profilin 4 (TAIR:AT4G29340.1); Has 915 Blast hits to 914 proteins in 244 species: Archae - 0; Bacteria - 2; Metazoa - 138; Fungi - 121; Plants - 583; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|36966 : 166.0) no description available & (gnl|cdd|84632 : 159.0) no description available & (reliability: 392.0) & (original description: Putative PRO2, Description = Profilin-2, PFAM = PF00235)' T '31.1' 'cell.organisation' 'niben101scf05818_155347-160957' '(at1g52080 : 269.0) unknown function; AR791; FUNCTIONS IN: actin binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Hydroxyproline-rich glycoprotein family protein (TAIR:AT3G25690.2); Has 24282 Blast hits to 16377 proteins in 1084 species: Archae - 431; Bacteria - 1887; Metazoa - 12444; Fungi - 1813; Plants - 1044; Viruses - 150; Other Eukaryotes - 6513 (source: NCBI BLink). & (reliability: 538.0) & (original description: Putative AR791, Description = Actin binding family protein, putative isoform 2, PFAM = )' T '31.1' 'cell.organisation' 'niben101scf05845_166252-169678' '(at3g04700 : 152.0) CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT3G04710.3); Has 200 Blast hits to 200 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|71376 : 110.0) no description available & (reliability: 304.0) & (original description: Putative , Description = , PFAM = PF07939)' T '31.1' 'cell.organisation' 'niben101scf05855_296360-305509' '(at4g01710 : 235.0) belongs to the DIS(distorted) gene family. Encodes a actin polymerization factor. Involved in cell expansion of trichome.; CROOKED (CRK); CONTAINS InterPro DOMAIN/s: ARP2/3 complex 16kDa subunit (p16-Arc) (InterPro:IPR006789); BEST Arabidopsis thaliana protein match is: ARP2/3 complex 16 kDa subunit (p16-Arc) (TAIR:AT5G65274.1); Has 360 Blast hits to 360 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 256; Fungi - 50; Plants - 40; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|38590 : 150.0) no description available & (gnl|cdd|68277 : 146.0) no description available & (reliability: 470.0) & (original description: Putative ARPC5A, Description = Actin-related protein 2/3 complex subunit 5A, PFAM = PF04699)' T '31.1' 'cell.organisation' 'niben101scf05875_19547-30693' '(at1g63640 : 879.0) P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (TAIR:AT5G41310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35460 : 490.0) no description available & (gnl|cdd|30088 : 416.0) no description available & (p46869|fla10_chlre : 192.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1758.0) & (original description: Putative predicted gene, Description = Putative kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf05895_250720-261842' '(at5g66310 : 743.0) ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT3G51150.2); Has 12086 Blast hits to 11258 proteins in 438 species: Archae - 14; Bacteria - 210; Metazoa - 5156; Fungi - 1590; Plants - 1989; Viruses - 17; Other Eukaryotes - 3110 (source: NCBI BLink). & (gnl|cdd|35463 : 447.0) no description available & (gnl|cdd|30096 : 422.0) no description available & (p46869|fla10_chlre : 221.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1486.0) & (original description: Putative KIN7H, Description = Kinesin-like protein KIN-7H, PFAM = PF00225;PF11995)' T '31.1' 'cell.organisation' 'niben101scf06000_514648-519532' '(at5g07840 : 209.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G61230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29261 : 97.8) no description available & (gnl|cdd|39613 : 81.6) no description available & (reliability: 418.0) & (original description: Putative Sb04g000390, Description = Putative uncharacterized protein Sb04g000390, PFAM = PF12796;PF13606)' T '31.1' 'cell.organisation' 'niben101scf06158_178633-192846' '(at3g58760 : 573.0) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT4G18950.1); Has 165609 Blast hits to 134537 proteins in 4793 species: Archae - 244; Bacteria - 16399; Metazoa - 69591; Fungi - 13531; Plants - 33415; Viruses - 845; Other Eukaryotes - 31584 (source: NCBI BLink). & (gnl|cdd|35413 : 248.0) no description available & (gnl|cdd|87344 : 200.0) no description available & (q6x4a2|cipk1_orysa : 106.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1106.0) & (original description: Putative APK1, Description = Ankyrin-kinase protein, PFAM = PF12796;PF07714)' T '31.1' 'cell.organisation' 'niben101scf06186_880058-887460' '(at5g23910 : 334.0) ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT5G02370.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30098 : 214.0) no description available & (gnl|cdd|35463 : 183.0) no description available & (o23826|k125_tobac : 107.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 668.0) & (original description: Putative PGSC0003DMG400015789, Description = Kinesin-like protein, PFAM = PF12836;PF00225)' T '31.1' 'cell.organisation' 'niben101scf06236_417618-421805' '(at3g61060 : 362.0) phloem protein 2-A13 (PP2-A13); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 682.0) & (original description: Putative PP2A13, Description = F-box protein PP2-A13, PFAM = PF14299;PF00646)' T '31.1' 'cell.organisation' 'niben101scf06349_35049-38762' '(at3g27960 : 744.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: pollen tube growth; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G27500.1); Has 11593 Blast hits to 4983 proteins in 549 species: Archae - 196; Bacteria - 3972; Metazoa - 4777; Fungi - 883; Plants - 387; Viruses - 3; Other Eukaryotes - 1375 (source: NCBI BLink). & (gnl|cdd|37051 : 324.0) no description available & (reliability: 1488.0) & (original description: Putative At3g27960, Description = Kinesin light chain-like protein, PFAM = PF13181;PF13181;PF13424;PF13424)' T '31.1' 'cell.organisation' 'niben101scf06525_10813-31368' '(at3g23670 : 1115.0) Microtubule motor kinesin PAKRP1L/Kinesin-12B. Together with PAKRP1/Kinesin-12A, serve as linkers of the plus ends of antiparallel microtubules in the phragmoplast.; KINESIN-12B; FUNCTIONS IN: microtubule motor activity, plus-end-directed microtubule motor activity; INVOLVED IN: phragmoplast assembly, microgametogenesis; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin-related protein (InterPro:IPR010544), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast-associated kinesin-related protein 1 (TAIR:AT4G14150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70035 : 543.0) no description available & (gnl|cdd|39481 : 372.0) no description available & (p46869|fla10_chlre : 231.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2230.0) & (original description: Putative KIN12B, Description = Kinesin-like protein KIN12B, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf06556_53158-58924' '(at4g15930 : 150.0) Dynein light chain type 1 family protein; FUNCTIONS IN: microtubule motor activity; INVOLVED IN: microtubule-based process; LOCATED IN: microtubule associated complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dynein light chain, type 1/2, conserved site (InterPro:IPR019763), Dynein light chain, type 1/2 (InterPro:IPR001372); BEST Arabidopsis thaliana protein match is: Dynein light chain type 1 family protein (TAIR:AT5G20110.1); Has 1403 Blast hits to 1403 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 730; Fungi - 108; Plants - 264; Viruses - 0; Other Eukaryotes - 301 (source: NCBI BLink). & (gnl|cdd|85315 : 128.0) no description available & (q39580|dyl1_chlre : 126.0) Dynein 8 kDa light chain, flagellar outer arm - Chlamydomonas reinhardtii & (gnl|cdd|38640 : 121.0) no description available & (reliability: 300.0) & (original description: Putative DYNLL2, Description = Dynein light chain 2, cytoplasmic, PFAM = PF01221)' T '31.1' 'cell.organisation' 'niben101scf06653_94442-111043' '(at2g30910 : 522.0) actin-related protein C1A (ARPC1A); FUNCTIONS IN: actin binding, nucleotide binding; INVOLVED IN: actin filament organization; LOCATED IN: Arp2/3 protein complex, nucleus, cytoplasm; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), Actin-related protein 2/3 complex, subunit 1 (InterPro:IPR017383), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: actin-related protein C1B (TAIR:AT2G31300.1). & (gnl|cdd|36736 : 380.0) no description available & (reliability: 1044.0) & (original description: Putative ARPC1A, Description = Actin-related protein 2/3 complex subunit 1A, PFAM = PF00400;PF12894)' T '31.1' 'cell.organisation' 'niben101scf06653_165242-169747' '(at1g70140 : 503.0) Encodes a group I formin. Binds to F-actin barbed ends. Has severing actin filaments activity. Binds profilin. Involved in the initiation and tip growth of root hairs through regulation of actin cytoskeleton.; formin 8 (FH8); FUNCTIONS IN: actin binding, profilin binding, actin filament binding; INVOLVED IN: actin nucleation, cell tip growth; LOCATED IN: cell-cell junction, plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin homologue 4 (TAIR:AT1G24150.1); Has 22376 Blast hits to 12386 proteins in 831 species: Archae - 31; Bacteria - 2621; Metazoa - 7710; Fungi - 2231; Plants - 6132; Viruses - 1038; Other Eukaryotes - 2613 (source: NCBI BLink). & (gnl|cdd|85898 : 324.0) no description available & (gnl|cdd|37133 : 282.0) no description available & (reliability: 1006.0) & (original description: Putative FH8, Description = Formin-like protein 8, PFAM = PF02181)' T '31.1' 'cell.organisation' 'niben101scf06700_460520-519505' '(at3g44730 : 1089.0) kinesin-like protein 1 (KP1); FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (TAIR:AT2G47500.1); Has 10649 Blast hits to 10123 proteins in 338 species: Archae - 0; Bacteria - 46; Metazoa - 4773; Fungi - 1367; Plants - 1910; Viruses - 0; Other Eukaryotes - 2553 (source: NCBI BLink). & (gnl|cdd|35460 : 464.0) no description available & (gnl|cdd|30088 : 418.0) no description available & (p46869|fla10_chlre : 213.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2178.0) & (original description: Putative KP1, Description = Kinesin KP1, PFAM = PF00307;PF00225)' T '31.1' 'cell.organisation' 'niben101scf06814_106823-111775' '(q9zp40|pg1_pea : 291.0) Plastoglobulin-1, chloroplast precursor - Pisum sativum (Garden pea) & (at2g35490 : 286.0) Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: fibrillin (TAIR:AT4G04020.1); Has 422 Blast hits to 421 proteins in 82 species: Archae - 0; Bacteria - 91; Metazoa - 1; Fungi - 0; Plants - 314; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|68332 : 190.0) no description available & (reliability: 572.0) & (original description: Putative PAP3, Description = Probable plastid-lipid-associated protein 3, chloroplastic, PFAM = PF04755)' T '31.1' 'cell.organisation' 'niben101scf06836_167447-171834' '(at1g62040 : 209.0) autophagy 8c (ATG8C); FUNCTIONS IN: microtubule binding; INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G21980.2). & (gnl|cdd|29162 : 190.0) no description available & (gnl|cdd|36867 : 188.0) no description available & (reliability: 390.0) & (original description: Putative ATG8C, Description = Autophagy-related protein 8C, PFAM = PF02991)' T '31.1' 'cell.organisation' 'niben101scf06872_394839-405107' '(at3g49650 : 853.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT1G18550.1); Has 11521 Blast hits to 10970 proteins in 399 species: Archae - 16; Bacteria - 121; Metazoa - 4988; Fungi - 1461; Plants - 1855; Viruses - 76; Other Eukaryotes - 3004 (source: NCBI BLink). & (gnl|cdd|30092 : 458.0) no description available & (gnl|cdd|35463 : 397.0) no description available & (p46869|fla10_chlre : 206.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1706.0) & (original description: Putative kif19, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf06954_170334-175568' '(at5g09820 : 271.0) Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: Plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT3G26070.1); Has 405 Blast hits to 405 proteins in 80 species: Archae - 0; Bacteria - 95; Metazoa - 0; Fungi - 0; Plants - 302; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|68332 : 148.0) no description available & (q6k439|pap2_orysa : 92.4) Probable plastid-lipid-associated protein 2, chloroplast precursor (Fibrillin-like protein 2) - Oryza sativa (Rice) & (reliability: 542.0) & (original description: Putative PAP7, Description = Probable plastid-lipid-associated protein 7, chloroplastic, PFAM = PF04755)' T '31.1' 'cell.organisation' 'niben101scf06958_346708-351805' '(at1g74790 : 803.0) catalytics; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Soluble quinoprotein glucose/sorbosone dehydrogenase (InterPro:IPR011041), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: hipl2 protein precursor (TAIR:AT5G62630.1); Has 3691 Blast hits to 3691 proteins in 820 species: Archae - 60; Bacteria - 1937; Metazoa - 139; Fungi - 4; Plants - 281; Viruses - 0; Other Eukaryotes - 1270 (source: NCBI BLink). & (gnl|cdd|32316 : 83.5) no description available & (reliability: 1606.0) & (original description: Putative hipl1, Description = HIPL1 protein, PFAM = PF07995)' T '31.1' 'cell.organisation' 'niben101scf07007_123778-131977' '(at4g27430 : 448.0) Positive regulator of light-regulated genes. Novel nuclear protein which requires light for its high level expression.; COP1-interacting protein 7 (CIP7); FUNCTIONS IN: transcription activator activity; INVOLVED IN: chlorophyll biosynthetic process, response to light stimulus, anthocyanin biosynthetic process; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR class), putative (TAIR:AT1G61100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 896.0) & (original description: Putative CIP7, Description = COP1-interacting protein 7 (CIP7)-like protein, PFAM = )' T '31.1' 'cell.organisation' 'niben101scf07008_44842-52500' '(at3g16060 : 877.0) ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G16630.2); Has 9813 Blast hits to 9533 proteins in 306 species: Archae - 0; Bacteria - 4; Metazoa - 4228; Fungi - 1343; Plants - 1851; Viruses - 0; Other Eukaryotes - 2387 (source: NCBI BLink). & (gnl|cdd|35467 : 538.0) no description available & (gnl|cdd|30089 : 468.0) no description available & (o23826|k125_tobac : 160.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 1754.0) & (original description: Putative 10310, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf07026_21366-39196' '(at3g54170 : 128.0) Encodes protein that binds FKBP12. This interaction is disrupted by FK506 but not by cyclosporin A.; FKBP12 interacting protein 37 (FIP37); Has 21268 Blast hits to 13212 proteins in 1142 species: Archae - 433; Bacteria - 2157; Metazoa - 10991; Fungi - 1638; Plants - 938; Viruses - 51; Other Eukaryotes - 5060 (source: NCBI BLink). & (gnl|cdd|38202 : 93.7) no description available & (reliability: 256.0) & (original description: Putative FIP37, Description = FKBP12-interacting protein of 37 kDa, PFAM = PF09486)' T '31.1' 'cell.organisation' 'niben101scf07026_25149-44523' '(at3g54170 : 285.0) Encodes protein that binds FKBP12. This interaction is disrupted by FK506 but not by cyclosporin A.; FKBP12 interacting protein 37 (FIP37); Has 21268 Blast hits to 13212 proteins in 1142 species: Archae - 433; Bacteria - 2157; Metazoa - 10991; Fungi - 1638; Plants - 938; Viruses - 51; Other Eukaryotes - 5060 (source: NCBI BLink). & (gnl|cdd|38202 : 265.0) no description available & (reliability: 570.0) & (original description: Putative FIP37, Description = FKBP12-interacting protein of 37 kDa, PFAM = PF17098)' T '31.1' 'cell.organisation' 'niben101scf07040_372240-380609' '(at2g47500 : 974.0) P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 4 (TAIR:AT5G27000.1); Has 11938 Blast hits to 11443 proteins in 432 species: Archae - 0; Bacteria - 1; Metazoa - 5987; Fungi - 1397; Plants - 1883; Viruses - 0; Other Eukaryotes - 2670 (source: NCBI BLink). & (gnl|cdd|35460 : 462.0) no description available & (gnl|cdd|30088 : 444.0) no description available & (o23826|k125_tobac : 209.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 1948.0) & (original description: Putative ATK4, Description = Kinesin-4, PFAM = PF00225;PF00307)' T '31.1' 'cell.organisation' 'niben101scf07223_443793-448565' '(at3g09550 : 752.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G12360.1); Has 55803 Blast hits to 24932 proteins in 1099 species: Archae - 58; Bacteria - 5470; Metazoa - 27318; Fungi - 5824; Plants - 4263; Viruses - 331; Other Eukaryotes - 12539 (source: NCBI BLink). & (gnl|cdd|35729 : 112.0) no description available & (gnl|cdd|29261 : 94.8) no description available & (reliability: 1504.0) & (original description: Putative At3g12360, Description = Ankyrin repeat-containing protein At3g12360, PFAM = PF13962;PF00023;PF12796;PF12796)' T '31.1' 'cell.organisation' 'niben101scf07231_49258-86838' '(at5g07740 : 667.0) actin binding; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; EXPRESSED IN: shoot apex, stem; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Tensin phosphatase, C2 domain (InterPro:IPR014020), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 protein (TAIR:AT5G07770.1). & (gnl|cdd|85898 : 378.0) no description available & (gnl|cdd|37133 : 265.0) no description available & (reliability: 1334.0) & (original description: Putative FH12, Description = Formin-like protein, PFAM = PF02181;PF10409)' T '31.1' 'cell.organisation' 'niben101scf07272_187839-193147' '(at1g76900 : 578.0) Member of TLP family; tubby like protein 1 (TLP1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 10 (TAIR:AT1G25280.1); Has 1520 Blast hits to 1117 proteins in 153 species: Archae - 0; Bacteria - 107; Metazoa - 432; Fungi - 112; Plants - 488; Viruses - 57; Other Eukaryotes - 324 (source: NCBI BLink). & (gnl|cdd|37713 : 434.0) no description available & (gnl|cdd|85281 : 335.0) no description available & (reliability: 1156.0) & (original description: Putative TULP8, Description = Tubby-like F-box protein 8, PFAM = PF01167;PF00646)' T '31.1' 'cell.organisation' 'niben101scf07383_345182-352111' '(at1g80350 : 789.0) encodes a p60 katanin protein that is expressed throughout the plant. Required for the specification of cell fates from early in development (in the meristem) through differentiation and for normal postmitotic organization of cortical microtubules into transverse arrays in root epidermis cells. Mutants display cytoskeletal defects.; ECTOPIC ROOT HAIR 3 (ERH3); FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: trichome branching, cortical microtubule organization, multidimensional cell growth, plant-type cell wall biogenesis, microtubule cytoskeleton organization; LOCATED IN: katanin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Vps4 oligomerisation, C-terminal (InterPro:IPR015415); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G34560.1); Has 31677 Blast hits to 29370 proteins in 3124 species: Archae - 1478; Bacteria - 12054; Metazoa - 4742; Fungi - 3292; Plants - 2928; Viruses - 23; Other Eukaryotes - 7160 (source: NCBI BLink). & (gnl|cdd|35957 : 611.0) no description available & (gnl|cdd|30812 : 237.0) no description available & (p54774|cdc48_soybn : 191.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 1578.0) & (original description: Putative AAA1, Description = Katanin p60 ATPase-containing subunit A1, PFAM = PF09336;PF00004)' T '31.1' 'cell.organisation' 'niben101scf07393_141086-154177' '(at3g53000 : 441.0) phloem protein 2-A15 (PP2-A15); FUNCTIONS IN: carbohydrate binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 510 Blast hits to 504 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 510; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 882.0) & (original description: Putative PP2A15, Description = F-box protein PP2-A15, PFAM = PF14299)' T '31.1' 'cell.organisation' 'niben101scf07417_90448-93584' '(at5g64920 : 177.0) Encodes a RING-H2 protein that interacts with the RING finger domain of COP1. CIP8 exhibits a strong interaction with the E2 ubiquitin conjugating enzyme AtUBC8 through its N-terminal domain and promotes ubiquitination in an E2-dependent fashion in vitro. It is possible that the AtUBC8-CIP8 module might interact with COP1 in vivo, thereby participating in proteasome-mediated degradation of HY5.; COP1-interacting protein 8 (CIP8); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G01980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative CIP8, Description = E3 ubiquitin-protein ligase CIP8, PFAM = PF13639;PF14369)' T '31.1' 'cell.organisation' 'niben101scf07589_124736-161601' '(at5g24560 : 138.0) phloem protein 2-B12 (PP2-B12); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B1 (TAIR:AT2G02230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative , Description = , PFAM = PF14299;PF00646)' T '31.1' 'cell.organisation' 'niben101scf07645_17380-27656' '(o23826|k125_tobac : 1522.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (at2g36200 : 1227.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28620.1). & (gnl|cdd|35464 : 926.0) no description available & (gnl|cdd|30086 : 555.0) no description available & (reliability: 2454.0) & (original description: Putative KIN5A, Description = Kinesin-like protein KIN-5A, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf07744_36038-40428' '(at3g01750 : 622.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G04140.1); Has 30372 Blast hits to 15038 proteins in 745 species: Archae - 53; Bacteria - 2422; Metazoa - 15116; Fungi - 2165; Plants - 2906; Viruses - 97; Other Eukaryotes - 7613 (source: NCBI BLink). & (gnl|cdd|29261 : 97.1) no description available & (gnl|cdd|35729 : 88.2) no description available & (reliability: 1244.0) & (original description: Putative BnaC03g32310D, Description = BnaC03g32310D protein, PFAM = PF00023;PF12796)' T '31.1' 'cell.organisation' 'niben101scf07793_122119-129231' '(at3g54170 : 107.0) Encodes protein that binds FKBP12. This interaction is disrupted by FK506 but not by cyclosporin A.; FKBP12 interacting protein 37 (FIP37); Has 21268 Blast hits to 13212 proteins in 1142 species: Archae - 433; Bacteria - 2157; Metazoa - 10991; Fungi - 1638; Plants - 938; Viruses - 51; Other Eukaryotes - 5060 (source: NCBI BLink). & (gnl|cdd|38202 : 81.7) no description available & (reliability: 214.0) & (original description: Putative FIP37, Description = FKBP12-interacting protein of 37 kDa, PFAM = )' T '31.1' 'cell.organisation' 'niben101scf07801_45775-48350' '(at5g43070 : 93.6) WPP family members contains an NE targeting domain. This domain, called the WPP domain after a highly conserved Trp-Pro-Pro motif, is necessary and sufficient for NE targeting of WPP1. RNAi suppression of WPP1 resulted in reduced mitotic activity.; WPP domain protein 1 (WPP1); BEST Arabidopsis thaliana protein match is: WPP domain protein 2 (TAIR:AT1G47200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative MAF1, Description = MFP1 attachment factor 1, PFAM = PF13943)' T '31.1' 'cell.organisation' 'niben101scf08006_232527-245361' '(at3g23670 : 1154.0) Microtubule motor kinesin PAKRP1L/Kinesin-12B. Together with PAKRP1/Kinesin-12A, serve as linkers of the plus ends of antiparallel microtubules in the phragmoplast.; KINESIN-12B; FUNCTIONS IN: microtubule motor activity, plus-end-directed microtubule motor activity; INVOLVED IN: phragmoplast assembly, microgametogenesis; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin-related protein (InterPro:IPR010544), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast-associated kinesin-related protein 1 (TAIR:AT4G14150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70035 : 552.0) no description available & (gnl|cdd|39481 : 370.0) no description available & (p46869|fla10_chlre : 238.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2308.0) & (original description: Putative KIN12B, Description = Kinesin-like protein KIN12B, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf08242_233758-237242' '(at5g51160 : 233.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G10720.1); Has 23468 Blast hits to 11643 proteins in 579 species: Archae - 38; Bacteria - 1696; Metazoa - 12874; Fungi - 1168; Plants - 2550; Viruses - 45; Other Eukaryotes - 5097 (source: NCBI BLink). & (gnl|cdd|29261 : 92.1) no description available & (gnl|cdd|35730 : 82.8) no description available & (reliability: 466.0) & (original description: Putative BnaA05g04290D, Description = BnaA05g04290D protein, PFAM = PF12796;PF12796;PF13962;PF00023)' T '31.1' 'cell.organisation' 'niben101scf08272_22745-41601' '(at3g60830 : 588.0) Encodes an actin-related protein required for normal embryogenesis, plant architecture and floral organ abscission.; actin-related protein 7 (ARP7); CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 12219 Blast hits to 11995 proteins in 2504 species: Archae - 0; Bacteria - 50; Metazoa - 5224; Fungi - 3189; Plants - 1407; Viruses - 2; Other Eukaryotes - 2347 (source: NCBI BLink). & (gnl|cdd|35895 : 303.0) no description available & (gnl|cdd|28896 : 269.0) no description available & (p30173|act13_soltu : 229.0) Actin-101 - Solanum tuberosum (Potato) & (reliability: 1176.0) & (original description: Putative ARP7, Description = Actin-related protein 7, PFAM = PF00022;PF00022)' T '31.1' 'cell.organisation' 'niben101scf08341_1175939-1189279' '(at3g24530 : 725.0) AAA-type ATPase family protein / ankyrin repeat family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Ankyrin repeat-containing domain (InterPro:IPR020683), CbxX/CfqX (InterPro:IPR000641), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 1 in Arabidopsis thaliana (TAIR:AT2G28840.1); Has 62125 Blast hits to 27268 proteins in 1602 species: Archae - 369; Bacteria - 7189; Metazoa - 29752; Fungi - 5124; Plants - 2920; Viruses - 566; Other Eukaryotes - 16205 (source: NCBI BLink). & (gnl|cdd|35949 : 173.0) no description available & (gnl|cdd|29261 : 90.9) no description available & (reliability: 1450.0) & (original description: Putative v1g62711, Description = Predicted protein, PFAM = PF00004;PF12796)' T '31.1' 'cell.organisation' 'niben101scf08390_489956-497403' '(at1g23220 : 181.0) Dynein light chain type 1 family protein; FUNCTIONS IN: microtubule motor activity; INVOLVED IN: microtubule-based process; LOCATED IN: microtubule associated complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dynein light chain, type 1/2 (InterPro:IPR001372); BEST Arabidopsis thaliana protein match is: Dynein light chain type 1 family protein (TAIR:AT5G20110.1); Has 1246 Blast hits to 1246 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 642; Fungi - 104; Plants - 252; Viruses - 0; Other Eukaryotes - 248 (source: NCBI BLink). & (gnl|cdd|38640 : 111.0) no description available & (gnl|cdd|85315 : 85.0) no description available & (reliability: 362.0) & (original description: Putative vfPIP, Description = Dynein light chain type 1 family protein, PFAM = PF01221)' T '31.1' 'cell.organisation' 'niben101scf08519_234561-249144' '(at5g12320 : 168.0) ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G19150.1); Has 86458 Blast hits to 28632 proteins in 1360 species: Archae - 129; Bacteria - 7616; Metazoa - 44184; Fungi - 6856; Plants - 3179; Viruses - 915; Other Eukaryotes - 23579 (source: NCBI BLink). & (gnl|cdd|29261 : 104.0) no description available & (gnl|cdd|39379 : 83.9) no description available & (reliability: 336.0) & (original description: Putative BcARP, Description = Ankyrin repeats protein, PFAM = PF13857)' T '31.1' 'cell.organisation' 'niben101scf08574_53727-63069' '(at3g20150 : 701.0) Kinesin motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin-related protein (InterPro:IPR010544), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast-associated kinesin-related protein, putative (TAIR:AT3G23670.1); Has 35666 Blast hits to 25760 proteins in 1172 species: Archae - 323; Bacteria - 1981; Metazoa - 18692; Fungi - 3316; Plants - 2878; Viruses - 57; Other Eukaryotes - 8419 (source: NCBI BLink). & (gnl|cdd|70035 : 640.0) no description available & (gnl|cdd|39481 : 315.0) no description available & (p46869|fla10_chlre : 189.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1402.0) & (original description: Putative KRP, Description = Kinesin-related protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf08635_45111-49467' '(at4g00030 : 266.0) Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); Has 184 Blast hits to 184 proteins in 36 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|68332 : 113.0) no description available & (reliability: 532.0) & (original description: Putative PAP11, Description = Probable plastid-lipid-associated protein 11, PFAM = PF04755)' T '31.1' 'cell.organisation' 'niben101scf08640_12954-17562' '(gnl|cdd|29162 : 181.0) no description available & (gnl|cdd|36867 : 178.0) no description available & (at4g16520 : 175.0) autophagy 8f (ATG8F); CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT3G60640.1); Has 1518 Blast hits to 1516 proteins in 273 species: Archae - 0; Bacteria - 0; Metazoa - 724; Fungi - 178; Plants - 302; Viruses - 3; Other Eukaryotes - 311 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative ATG8F, Description = Autophagy-related protein 8f, PFAM = PF02991)' T '31.1' 'cell.organisation' 'niben101scf08709_234912-254072' '(at3g12380 : 869.0) Encodes a gene similar to actin-related proteins in other organisms. Member of nuclear ARP gene family.; actin-related protein 5 (ARP5); CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: Actin-like ATPase superfamily protein (TAIR:AT2G42100.1). & (gnl|cdd|35900 : 577.0) no description available & (gnl|cdd|28896 : 162.0) no description available & (p23343|act1_dauca : 104.0) Actin-1 - Daucus carota (Carrot) & (reliability: 1738.0) & (original description: Putative ARP5, Description = Actin-related protein 5, PFAM = PF00022;PF00022)' T '31.1' 'cell.organisation' 'niben101scf08773_7944-16837' '(at1g48635 : 392.0) peroxin 3 (PEX3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: peroxisome organization; LOCATED IN: mitochondrion, peroxisome, integral to peroxisomal membrane; CONTAINS InterPro DOMAIN/s: Peroxin-3 (InterPro:IPR006966); BEST Arabidopsis thaliana protein match is: peroxin 3-1 (TAIR:AT3G18160.1); Has 293 Blast hits to 293 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 111; Plants - 49; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|39645 : 229.0) no description available & (gnl|cdd|68456 : 105.0) no description available & (reliability: 784.0) & (original description: Putative PEX3, Description = Peroxisome biogenesis protein 3-2, PFAM = PF04882)' T '31.1' 'cell.organisation' 'niben101scf08783_150565-165061' '(at1g24460 : 681.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31570.1). & (gnl|cdd|35383 : 90.7) no description available & (reliability: 1362.0) & (original description: Putative , Description = Putative sporulation-specific protein 15-like, PFAM = )' T '31.1' 'cell.organisation' 'niben101scf08894_149219-153994' '(at1g07710 : 573.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT5G60070.1); Has 71061 Blast hits to 30444 proteins in 1217 species: Archae - 72; Bacteria - 7320; Metazoa - 31750; Fungi - 7301; Plants - 5738; Viruses - 586; Other Eukaryotes - 18294 (source: NCBI BLink). & (gnl|cdd|35728 : 108.0) no description available & (gnl|cdd|29261 : 100.0) no description available & (reliability: 1146.0) & (original description: Putative At5g02620, Description = Ankyrin repeat-containing protein At5g02620, PFAM = PF13637;PF00023;PF13962;PF12796;PF12796)' T '31.1' 'cell.organisation' 'niben101scf08991_252509-257145' '(at1g62050 : 612.0) Ankyrin repeat family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Protein of unknown function DUF3424 (InterPro:IPR021832), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT1G11740.1); Has 1256 Blast hits to 984 proteins in 147 species: Archae - 0; Bacteria - 27; Metazoa - 615; Fungi - 59; Plants - 389; Viruses - 2; Other Eukaryotes - 164 (source: NCBI BLink). & (gnl|cdd|35742 : 458.0) no description available & (reliability: 1224.0) & (original description: Putative BnaA03g59780D, Description = BnaA03g59780D protein, PFAM = PF12796;PF11904)' T '31.1' 'cell.organisation' 'niben101scf08991_263297-267903' '(gnl|cdd|29162 : 191.0) no description available & (at1g62040 : 189.0) autophagy 8c (ATG8C); FUNCTIONS IN: microtubule binding; INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G21980.2). & (gnl|cdd|36867 : 189.0) no description available & (reliability: 352.0) & (original description: Putative ATG8C, Description = Autophagy-related protein 8C, PFAM = PF02991)' T '31.1' 'cell.organisation' 'niben101scf09010_122846-131424' '(at2g21300 : 826.0) ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT4G38950.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35463 : 446.0) no description available & (gnl|cdd|30096 : 405.0) no description available & (p46869|fla10_chlre : 211.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1652.0) & (original description: Putative DBS1, Description = Kinesin-like protein, PFAM = PF00225;PF11995)' T '31.1' 'cell.organisation' 'niben101scf09127_85189-91933' '(at5g27550 : 754.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Kinesin motor domain (TAIR:AT2G22610.2); Has 10360 Blast hits to 10027 proteins in 304 species: Archae - 0; Bacteria - 2; Metazoa - 4607; Fungi - 1315; Plants - 1897; Viruses - 0; Other Eukaryotes - 2539 (source: NCBI BLink). & (gnl|cdd|30088 : 445.0) no description available & (gnl|cdd|35460 : 421.0) no description available & (o23826|k125_tobac : 204.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 1508.0) & (original description: Putative v1g161891, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf09189_123938-138761' '(at1g12430 : 1012.0) Encodes the kinesin-like protein PAK has an Armadillo motif tail and is involved in guard cell development in Arabidopsis (from Genbank record AF159052).However, no defect in stomatal complexes has been observed in loss of function mutations.; armadillo repeat kinesin 3 (ARK3); FUNCTIONS IN: microtubule motor activity, binding, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: armadillo repeat kinesin 2 (TAIR:AT1G01950.1). & (gnl|cdd|35461 : 342.0) no description available & (gnl|cdd|84623 : 324.0) no description available & (o23826|k125_tobac : 181.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 2024.0) & (original description: Putative ARK3, Description = Armadillo repeat-containing kinesin-like protein 3, PFAM = PF00225;PF00514)' T '31.1' 'cell.organisation' 'niben101scf09217_202553-206719' '(p80471|lipc_soltu : 429.0) Light-induced protein, chloroplast precursor (Chloroplastic drought-induced stress protein CDSP-34) - Solanum tuberosum (Potato) & (at4g22240 : 315.0) Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: fruit, guard cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: fibrillin (TAIR:AT4G04020.1); Has 461 Blast hits to 460 proteins in 78 species: Archae - 0; Bacteria - 75; Metazoa - 0; Fungi - 0; Plants - 360; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|68332 : 226.0) no description available & (reliability: 630.0) & (original description: Putative PAP2, Description = Probable plastid-lipid-associated protein 2, chloroplastic, PFAM = PF04755)' T '31.1' 'cell.organisation' 'niben101scf09234_158427-163668' '(at5g27950 : 614.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G55550.1); Has 10282 Blast hits to 9806 proteins in 314 species: Archae - 0; Bacteria - 8; Metazoa - 4569; Fungi - 1388; Plants - 1826; Viruses - 0; Other Eukaryotes - 2491 (source: NCBI BLink). & (gnl|cdd|30088 : 413.0) no description available & (gnl|cdd|35460 : 303.0) no description available & (p46869|fla10_chlre : 153.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1228.0) & (original description: Putative TBK5, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf09238_270024-286964' '(at1g23220 : 179.0) Dynein light chain type 1 family protein; FUNCTIONS IN: microtubule motor activity; INVOLVED IN: microtubule-based process; LOCATED IN: microtubule associated complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dynein light chain, type 1/2 (InterPro:IPR001372); BEST Arabidopsis thaliana protein match is: Dynein light chain type 1 family protein (TAIR:AT5G20110.1); Has 1246 Blast hits to 1246 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 642; Fungi - 104; Plants - 252; Viruses - 0; Other Eukaryotes - 248 (source: NCBI BLink). & (gnl|cdd|38640 : 111.0) no description available & (gnl|cdd|85315 : 85.0) no description available & (reliability: 358.0) & (original description: Putative vfPIP, Description = Dynein light chain type 1 family protein, PFAM = PF01221)' T '31.1' 'cell.organisation' 'niben101scf09343_91537-98958' '(at4g21270 : 834.0) Encodes a kinesin-like motor protein heavy chain. Loss of function mutations have reduced fertility and are defective in spindle formation in male meiosis.; kinesin 1 (ATK1); CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 5 (TAIR:AT4G05190.1); Has 113981 Blast hits to 63024 proteins in 3025 species: Archae - 1256; Bacteria - 16796; Metazoa - 54341; Fungi - 9779; Plants - 6646; Viruses - 430; Other Eukaryotes - 24733 (source: NCBI BLink). & (gnl|cdd|35460 : 504.0) no description available & (gnl|cdd|30088 : 484.0) no description available & (p46870|klp1_chlre : 207.0) Kinesin-like protein KLP1 - Chlamydomonas reinhardtii & (reliability: 1668.0) & (original description: Putative kif2, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf09433_163911-170331' '(at2g46225 : 309.0) Encodes a subunit of the WAVE complex. The WAVE complex is required for activation of ARP2/3 complex which functions in actin microfilament nucleation and branching. One of four ABI-like proteins.; ABI-1-like 1 (ABIL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: actin nucleation, trichome morphogenesis; LOCATED IN: SCAR complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: ABL interactor-like protein 3 (TAIR:AT5G24310.1). & (q9axa6|abil1_orysa : 251.0) Probable protein ABIL1 (Abl interactor-like protein 1) - Oryza sativa (Rice) & (gnl|cdd|37757 : 89.8) no description available & (reliability: 618.0) & (original description: Putative ABIL1, Description = Protein ABIL1, PFAM = )' T '31.1' 'cell.organisation' 'niben101scf09535_95339-112495' '(at1g80350 : 485.0) encodes a p60 katanin protein that is expressed throughout the plant. Required for the specification of cell fates from early in development (in the meristem) through differentiation and for normal postmitotic organization of cortical microtubules into transverse arrays in root epidermis cells. Mutants display cytoskeletal defects.; ECTOPIC ROOT HAIR 3 (ERH3); FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: trichome branching, cortical microtubule organization, multidimensional cell growth, plant-type cell wall biogenesis, microtubule cytoskeleton organization; LOCATED IN: katanin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Vps4 oligomerisation, C-terminal (InterPro:IPR015415); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G34560.1); Has 31677 Blast hits to 29370 proteins in 3124 species: Archae - 1478; Bacteria - 12054; Metazoa - 4742; Fungi - 3292; Plants - 2928; Viruses - 23; Other Eukaryotes - 7160 (source: NCBI BLink). & (gnl|cdd|35957 : 470.0) no description available & (gnl|cdd|30812 : 248.0) no description available & (q96372|cdc48_capan : 194.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 970.0) & (original description: Putative KATL1, Description = Katanin p60 ATPase-containing subunit A-like 1, PFAM = PF00004;PF09336)' T '31.1' 'cell.organisation' 'niben101scf09582_182183-193899' '(at5g56180 : 656.0) encodes a protein whose sequence is similar to actin-related proteins (ARPs) in other organisms. Member of nuclear ARP family of genes.; actin-related protein 8 (ARP8); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: actin 9 (TAIR:AT2G42090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35895 : 187.0) no description available & (gnl|cdd|28896 : 180.0) no description available & (p53498|act_chlre : 134.0) Actin - Chlamydomonas reinhardtii & (reliability: 1312.0) & (original description: Putative ARP8, Description = Actin-related protein 8, PFAM = PF00646;PF00022;PF00022)' T '31.1' 'cell.organisation' 'niben101scf09792_440226-450685' '(at3g23280 : 88.2) XB3 ortholog 5 in Arabidopsis thaliana (XBAT35); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 4 in Arabidopsis thaliana (TAIR:AT4G14365.1); Has 26382 Blast hits to 15025 proteins in 882 species: Archae - 61; Bacteria - 2221; Metazoa - 14003; Fungi - 1495; Plants - 1186; Viruses - 392; Other Eukaryotes - 7024 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative XBAT35, Description = Zinc finger family protein, PFAM = PF13920)' T '31.1' 'cell.organisation' 'niben101scf09929_11497-16340' '(at1g60430 : 321.0) actin-related protein C3 (ARPC3); CONTAINS InterPro DOMAIN/s: ARP2/3 complex, p21-Arc subunit (InterPro:IPR007204); Has 457 Blast hits to 457 proteins in 188 species: Archae - 0; Bacteria - 0; Metazoa - 232; Fungi - 135; Plants - 39; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (gnl|cdd|67669 : 246.0) no description available & (gnl|cdd|38365 : 234.0) no description available & (reliability: 642.0) & (original description: Putative ARPC3, Description = Actin-related protein 2/3 complex subunit 3, PFAM = PF04062)' T '31.1' 'cell.organisation' 'niben101scf10055_840169-847958' '(at4g19410 : 147.0) Pectinacetylesterase family protein; FUNCTIONS IN: actin binding, carboxylesterase activity; INVOLVED IN: cytoskeleton organization; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963), Profilin/allergen (InterPro:IPR002097); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G45280.2). & (reliability: 290.0) & (original description: Putative F383_20995, Description = Putative heat shock factor, PFAM = PF00235)' T '31.1' 'cell.organisation' 'niben101scf10086_119336-129125' '(at2g46910 : 323.0) Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: Plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT4G22240.1); Has 233 Blast hits to 231 proteins in 72 species: Archae - 0; Bacteria - 57; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 646.0) & (original description: Putative PAP10, Description = Probable plastid-lipid-associated protein 10, chloroplastic, PFAM = PF04755)' T '31.1' 'cell.organisation' 'niben101scf10157_307655-315468' '(at3g43210 : 1080.0) Encodes a kinesin TETRASPORE. Required for cytokinesis in pollen. In mutants, all four microspore nuclei remain within the same cytoplasm after meiosis.; TETRASPORE (TES); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT1G18370.1); Has 14242 Blast hits to 13167 proteins in 521 species: Archae - 65; Bacteria - 318; Metazoa - 6487; Fungi - 1661; Plants - 2059; Viruses - 3; Other Eukaryotes - 3649 (source: NCBI BLink). & (gnl|cdd|35463 : 422.0) no description available & (gnl|cdd|30096 : 406.0) no description available & (p46869|fla10_chlre : 188.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2160.0) & (original description: Putative NACK2, Description = Kinesin-like protein NACK2, PFAM = PF00225;PF11995)' T '31.1' 'cell.organisation' 'niben101scf10158_83069-95505' '(at4g03500 : 160.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G03460.1); Has 38634 Blast hits to 17459 proteins in 653 species: Archae - 49; Bacteria - 2374; Metazoa - 20314; Fungi - 3164; Plants - 3215; Viruses - 213; Other Eukaryotes - 9305 (source: NCBI BLink). & (gnl|cdd|29261 : 83.6) no description available & (reliability: 320.0) & (original description: Putative , Description = , PFAM = PF13962;PF12796;PF12796)' T '31.1' 'cell.organisation' 'niben101scf10324_32369-40359' '(at2g33385 : 380.0) actin-related protein C2B (arpc2b); CONTAINS InterPro DOMAIN/s: Arp2/3 complex, 34kDa subunit p34-Arc (InterPro:IPR007188); BEST Arabidopsis thaliana protein match is: Arp2/3 complex, 34 kD subunit p34-Arc (TAIR:AT1G30825.1). & (gnl|cdd|67653 : 83.8) no description available & (gnl|cdd|38037 : 81.2) no description available & (reliability: 760.0) & (original description: Putative ARPC2B, Description = Actin-related protein 2/3 complex subunit 2B, PFAM = PF04045)' T '31.1' 'cell.organisation' 'niben101scf10366_50370-54948' '(at1g27500 : 761.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G27960.1); Has 11165 Blast hits to 5021 proteins in 667 species: Archae - 177; Bacteria - 3877; Metazoa - 4684; Fungi - 753; Plants - 379; Viruses - 0; Other Eukaryotes - 1295 (source: NCBI BLink). & (gnl|cdd|37051 : 355.0) no description available & (reliability: 1522.0) & (original description: Putative At3g27960, Description = Kinesin light chain-like protein, PFAM = PF13181;PF13424;PF13424;PF13374)' T '31.1' 'cell.organisation' 'niben101scf10528_351987-357643' '(gnl|cdd|72813 : 312.0) no description available & (at1g77580 : 289.0) Plant protein of unknown function (DUF869); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G21810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 578.0) & (original description: Putative FPP3, Description = Filament-like plant protein 3, PFAM = PF05911;PF05911;PF05911;PF05911)' T '31.1' 'cell.organisation' 'niben101scf10635_256250-263273' '(at2g01680 : 665.0) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT2G31820.1); Has 36872 Blast hits to 17947 proteins in 711 species: Archae - 48; Bacteria - 2509; Metazoa - 18623; Fungi - 3211; Plants - 2983; Viruses - 164; Other Eukaryotes - 9334 (source: NCBI BLink). & (gnl|cdd|39379 : 101.0) no description available & (gnl|cdd|29261 : 96.3) no description available & (reliability: 1330.0) & (original description: Putative At2g01680, Description = Ankyrin repeat-containing protein At2g01680, PFAM = PF12796;PF12796;PF13962)' T '31.1' 'cell.organisation' 'niben101scf10708_34201-36767' '(at5g43070 : 96.7) WPP family members contains an NE targeting domain. This domain, called the WPP domain after a highly conserved Trp-Pro-Pro motif, is necessary and sufficient for NE targeting of WPP1. RNAi suppression of WPP1 resulted in reduced mitotic activity.; WPP domain protein 1 (WPP1); BEST Arabidopsis thaliana protein match is: WPP domain protein 2 (TAIR:AT1G47200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative MAF1, Description = MFP1 attachment factor 1, PFAM = PF13943)' T '31.1' 'cell.organisation' 'niben101scf10753_37487-42168' '(at1g12710 : 369.0) This gene is predicted to encode a protein with a PP2 domain. This domain in present in lectins found in squash and cucumber, suggesting that this protein could potentially have carbohydrate binding capabilities.; phloem protein 2-A12 (PP2-A12); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: phloem protein 2-A11 (TAIR:AT1G63090.1); Has 458 Blast hits to 452 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 456; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 738.0) & (original description: Putative P2A12, Description = F-box protein PP2-A12, PFAM = PF14299)' T '31.1' 'cell.organisation' 'niben101scf11009_134773-140595' '(at2g37080 : 278.0) ROP interactive partner 3 (RIP3); LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: ROP interactive partner 4 (TAIR:AT3G53350.1); Has 147635 Blast hits to 77239 proteins in 3391 species: Archae - 1987; Bacteria - 30902; Metazoa - 62424; Fungi - 12574; Plants - 8109; Viruses - 683; Other Eukaryotes - 30956 (source: NCBI BLink). & (reliability: 556.0) & (original description: Putative p70, Description = P70 protein, PFAM = )' T '31.1' 'cell.organisation' 'niben101scf11103_115270-135993' '(at1g55550 : 516.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: mitochondrion; EXPRESSED IN: seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G27950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30088 : 408.0) no description available & (gnl|cdd|35460 : 342.0) no description available & (o23826|k125_tobac : 159.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 1032.0) & (original description: Putative kifc3, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf11751_7981-12252' '(at3g09890 : 199.0) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing protein 2 (TAIR:AT4G35450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29261 : 96.3) no description available & (gnl|cdd|35729 : 88.9) no description available & (reliability: 398.0) & (original description: Putative BnaC03g35800D, Description = BnaC03g35800D protein, PFAM = PF12796;PF12796)' T '31.1' 'cell.organisation' 'niben101scf11991_42041-64635' '(at5g58160 : 555.0) actin binding; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Actin-binding FH2 (InterPro:IPR015425), Tensin phosphatase, C2 domain (InterPro:IPR014020); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (Formin Homology) protein (TAIR:AT2G25050.1); Has 66030 Blast hits to 44960 proteins in 1807 species: Archae - 80; Bacteria - 11670; Metazoa - 27723; Fungi - 9802; Plants - 6854; Viruses - 1874; Other Eukaryotes - 8027 (source: NCBI BLink). & (reliability: 1046.0) & (original description: Putative FH12, Description = Formin-like protein, PFAM = PF10409)' T '31.1' 'cell.organisation' 'niben101scf12205_1-15713' '(at4g18950 : 572.0) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Integrin-linked protein kinase (InterPro:IPR016253), Ankyrin repeat-containing domain (InterPro:IPR020683), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G58760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35413 : 234.0) no description available & (gnl|cdd|84488 : 188.0) no description available & (q6x4a2|cipk1_orysa : 108.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1144.0) & (original description: Putative APK1, Description = Ankyrin-kinase protein, PFAM = PF07714;PF12796)' T '31.1' 'cell.organisation' 'niben101scf12216_23270-36426' '(at5g47820 : 1399.0) encodes a kinesin-like protein with an N-terminal microtubule binding motor domain. Protein is localized to the periphery of the cytoplasm and mutants in the gene exhibit altered orientation of cellulose microfibrils and reduced mechanical strength of fibers.; FRAGILE FIBER 1 (FRA1); CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT3G50240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35465 : 614.0) no description available & (gnl|cdd|30094 : 523.0) no description available & (p46869|fla10_chlre : 243.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2798.0) & (original description: Putative BC2, Description = Kinesin-like protein, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf12762_42478-51272' '(at5g40160 : 280.0) Encodes ankyrin repeat protein EMB506. Mutations in this locus result in embryo lethality.; embryo defective 506 (EMB506); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat protein (TAIR:AT5G66055.1); Has 90387 Blast hits to 29284 proteins in 1374 species: Archae - 134; Bacteria - 8440; Metazoa - 46466; Fungi - 7182; Plants - 3258; Viruses - 1346; Other Eukaryotes - 23561 (source: NCBI BLink). & (gnl|cdd|29261 : 120.0) no description available & (gnl|cdd|35729 : 103.0) no description available & (reliability: 560.0) & (original description: Putative EMB506, Description = Ankyrin repeat domain-containing protein EMB506, chloroplastic, PFAM = PF12796)' T '31.1' 'cell.organisation' 'niben101scf13843_56839-61420' '(at5g65020 : 369.0) Annexins are calcium binding proteins that are localized in the cytoplasm. When cytosolic Ca2+ increases, they relocate to the plasma membrane. They may be involved in the Golgi-mediated secretion of polysaccharides.; annexin 2 (ANNAT2); FUNCTIONS IN: calcium-dependent phospholipid binding, calcium ion binding; INVOLVED IN: polysaccharide transport, response to water deprivation, response to salt stress, response to cold, response to heat; LOCATED IN: cytosol, nucleus, cell surface; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464), Annexin, type plant (InterPro:IPR009118); BEST Arabidopsis thaliana protein match is: annexin 7 (TAIR:AT5G10230.1); Has 4555 Blast hits to 2244 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 3503; Fungi - 207; Plants - 559; Viruses - 0; Other Eukaryotes - 286 (source: NCBI BLink). & (gnl|cdd|36037 : 341.0) no description available & (p51074|anx4_fraan : 303.0) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (reliability: 738.0) & (original description: Putative an34, Description = Annexin, PFAM = PF00191;PF00191;PF00191;PF00191)' T '31.1' 'cell.organisation' 'niben101scf13856_27492-38099' '(o23826|k125_tobac : 1705.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (at2g36200 : 1218.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28620.1). & (gnl|cdd|35464 : 913.0) no description available & (gnl|cdd|30086 : 558.0) no description available & (reliability: 2436.0) & (original description: Putative KIN5C, Description = Kinesin-like protein KIN-5C, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf14394_234788-241099' '(at4g10840 : 816.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G27960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37051 : 360.0) no description available & (reliability: 1632.0) & (original description: Putative Sb04g000780, Description = Putative uncharacterized protein Sb04g000780, PFAM = PF13424;PF13424;PF13424;PF13374)' T '31.1' 'cell.organisation' 'niben101scf14643_23519-30727' '(at5g35700 : 976.0) fimbrin-like protein 2 (FIM2); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actinin-type, actin-binding, conserved site (InterPro:IPR001589), Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715); BEST Arabidopsis thaliana protein match is: Actin binding Calponin homology (CH) domain-containing protein (TAIR:AT2G04750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35269 : 913.0) no description available & (gnl|cdd|34673 : 239.0) no description available & (reliability: 1952.0) & (original description: Putative FIM5, Description = Fimbrin-5, PFAM = PF00307;PF00307;PF00307;PF00307)' T '31.1' 'cell.organisation' 'niben101scf14643_30728-37276' '(at2g04740 : 772.0) ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Ankyrin repeat-containing domain (InterPro:IPR020683), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35731 : 419.0) no description available & (reliability: 1544.0) & (original description: Putative At2g04740, Description = BTB/POZ domain-containing protein At2g04740, PFAM = PF13637;PF00651;PF00651)' T '31.1' 'cell.organisation' 'niben101scf15100_36177-49471' '(at3g18670 : 311.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G04700.1); Has 4772 Blast hits to 3121 proteins in 218 species: Archae - 7; Bacteria - 222; Metazoa - 2187; Fungi - 197; Plants - 1396; Viruses - 2; Other Eukaryotes - 761 (source: NCBI BLink). & (reliability: 622.0) & (original description: Putative At5g35810, Description = Ankyrin repeat family protein, PFAM = PF13962)' T '31.1' 'cell.organisation' 'niben101scf16437_52757-62308' '(at5g54670 : 834.0) Encodes a truncated KatC polypeptide (KatC(207-754)), which includes the carboxyl-terminal region of KatC. This was expressed in Escherichia coli and was shown to possess microtubule-stimulated ATPase activity.; kinesin 3 (ATK3); FUNCTIONS IN: microtubule binding, microtubule motor activity, ATPase activity; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 2 (TAIR:AT4G27180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35460 : 514.0) no description available & (gnl|cdd|30088 : 492.0) no description available & (p46870|klp1_chlre : 189.0) Kinesin-like protein KLP1 - Chlamydomonas reinhardtii & (reliability: 1668.0) & (original description: Putative ATK1, Description = Kinesin-1, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf16733_131194-137815' '(at5g08120 : 155.0) Microtubule-associated and viral movement protein binding protein. Negatively regulates KN1 association to plasmodesmata and, consequently, cell-to-cell transport. Involved in the alignment of cortical microtubules, the patterning of stomata and in restricting tobamoviral infections.; movement protein binding protein 2C (MPB2C); Has 5726 Blast hits to 4344 proteins in 670 species: Archae - 77; Bacteria - 646; Metazoa - 3260; Fungi - 443; Plants - 256; Viruses - 12; Other Eukaryotes - 1032 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative MPB2C, Description = Microtubule-associated protein, PFAM = )' T '31.1' 'cell.organisation' 'niben101scf16733_131230-137835' '(at5g08120 : 170.0) Microtubule-associated and viral movement protein binding protein. Negatively regulates KN1 association to plasmodesmata and, consequently, cell-to-cell transport. Involved in the alignment of cortical microtubules, the patterning of stomata and in restricting tobamoviral infections.; movement protein binding protein 2C (MPB2C); Has 5726 Blast hits to 4344 proteins in 670 species: Archae - 77; Bacteria - 646; Metazoa - 3260; Fungi - 443; Plants - 256; Viruses - 12; Other Eukaryotes - 1032 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative MPB2C, Description = Microtubule-associated protein, PFAM = )' T '31.1' 'cell.organisation' 'niben101scf17552_2255-16412' '(at5g20350 : 870.0) Encodes a protein containing ankyrin and DHHC-CRD domain. Acts to restrict the size of the swelling that forms at the beginning of root hair cell growth, possibly by a mechanism that requires RHD1. Mutant displays defects in both root hair and pollen tube growth.; TIP GROWTH DEFECTIVE 1 (TIP1); FUNCTIONS IN: acyl binding, S-acyltransferase activity; INVOLVED IN: response to salt stress, cell tip growth; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein with DHHC zinc finger domain (TAIR:AT2G14255.1); Has 74376 Blast hits to 32836 proteins in 1312 species: Archae - 100; Bacteria - 6632; Metazoa - 35576; Fungi - 7192; Plants - 4422; Viruses - 788; Other Eukaryotes - 19666 (source: NCBI BLink). & (gnl|cdd|35729 : 375.0) no description available & (gnl|cdd|34870 : 132.0) no description available & (reliability: 1740.0) & (original description: Putative PAT24, Description = Protein S-acyltransferase 24, PFAM = PF12796;PF12796;PF01529)' T '31.1' 'cell.organisation' 'niben101scf18001_175893-180604' '(at1g07710 : 578.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT5G60070.1); Has 71061 Blast hits to 30444 proteins in 1217 species: Archae - 72; Bacteria - 7320; Metazoa - 31750; Fungi - 7301; Plants - 5738; Viruses - 586; Other Eukaryotes - 18294 (source: NCBI BLink). & (gnl|cdd|35729 : 109.0) no description available & (gnl|cdd|29261 : 96.3) no description available & (reliability: 1156.0) & (original description: Putative IGN1, Description = Ankyrin repeat-containing protein, PFAM = PF13962;PF12796;PF12796;PF12796;PF12796)' T '31.1' 'cell.organisation' 'niben101scf18667_212245-227156' '(at1g43700 : 194.0) Encodes a VirE2-interacting protein. VIP1 mediates nuclear translocation of VirE2 via its amino half, and interacts with histone H2A via it carboxyl half.; VIRE2-interacting protein 1 (VIP1); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to sulfate starvation, sulfate transport, DNA mediated transformation, nuclear import; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT1G06070.1); Has 1450 Blast hits to 1450 proteins in 153 species: Archae - 0; Bacteria - 51; Metazoa - 59; Fungi - 47; Plants - 1254; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (q6s4p4|rf2b_orysa : 164.0) Transcription factor RF2b - Oryza sativa (Rice) & (reliability: 388.0) & (original description: Putative rsg, Description = BZIP transcriptional activator RSG, PFAM = PF00170)' T '31.1' 'cell.organisation' 'niben101scf19932_100731-105137' '(at3g61060 : 314.0) phloem protein 2-A13 (PP2-A13); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 608.0) & (original description: Putative P2A12, Description = AtPP2-A11, PFAM = PF14299;PF00646)' T '31.1' 'cell.organisation' 'niben101scf21125_6236-19073' '(at1g13180 : 732.0) Mutant has defect in trichome cell expansion and actin organization resulting in a distorted trichome phenotype.; DISTORTED TRICHOMES 1 (DIS1); FUNCTIONS IN: actin binding, structural constituent of cytoskeleton, ATP binding; INVOLVED IN: actin filament organization, multidimensional cell growth, cell morphogenesis, trichome morphogenesis; LOCATED IN: Arp2/3 protein complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000), Actin-related protein 3 (InterPro:IPR015623); BEST Arabidopsis thaliana protein match is: Actin-like ATPase superfamily protein (TAIR:AT2G42100.1); Has 12406 Blast hits to 12242 proteins in 2483 species: Archae - 6; Bacteria - 5; Metazoa - 5339; Fungi - 3178; Plants - 1454; Viruses - 2; Other Eukaryotes - 2422 (source: NCBI BLink). & (gnl|cdd|35897 : 620.0) no description available & (gnl|cdd|28896 : 415.0) no description available & (p20904|act_volca : 221.0) Actin - Volvox carteri & (reliability: 1464.0) & (original description: Putative ARP3, Description = Actin-related protein 3, PFAM = PF00022)' T '31.1' 'cell.organisation' 'niben101scf22524_60048-74424' '(gnl|cdd|38640 : 100.0) no description available & (at1g23220 : 89.0) Dynein light chain type 1 family protein; FUNCTIONS IN: microtubule motor activity; INVOLVED IN: microtubule-based process; LOCATED IN: microtubule associated complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dynein light chain, type 1/2 (InterPro:IPR001372); BEST Arabidopsis thaliana protein match is: Dynein light chain type 1 family protein (TAIR:AT5G20110.1); Has 1246 Blast hits to 1246 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 642; Fungi - 104; Plants - 252; Viruses - 0; Other Eukaryotes - 248 (source: NCBI BLink). & (gnl|cdd|85315 : 81.9) no description available & (reliability: 178.0) & (original description: Putative vfPIP, Description = Dynein light chain type 1 family protein, PFAM = PF01221)' T '31.1' 'cell.organisation' 'niben101scf23874_13549-22748' '(at5g48460 : 1009.0) Actin binding Calponin homology (CH) domain-containing protein; FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actinin-type, actin-binding, conserved site (InterPro:IPR001589), Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715); BEST Arabidopsis thaliana protein match is: fimbrin-like protein 2 (TAIR:AT5G35700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35269 : 881.0) no description available & (gnl|cdd|34673 : 236.0) no description available & (reliability: 2018.0) & (original description: Putative FIM2, Description = Fimbrin-2, PFAM = PF00307;PF00307;PF00307;PF00307)' T '31.1' 'cell.organisation' 'niben101scf24082_52264-56544' '(at3g50390 : 226.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G26490.1); Has 33178 Blast hits to 17374 proteins in 678 species: Archae - 38; Bacteria - 5184; Metazoa - 12049; Fungi - 7688; Plants - 3936; Viruses - 0; Other Eukaryotes - 4283 (source: NCBI BLink). & (gnl|cdd|29257 : 120.0) no description available & (gnl|cdd|35487 : 81.4) no description available & (reliability: 452.0) & (original description: Putative PGSC0003DMG400026464, Description = F-box and wd40 domain protein, putative, PFAM = PF11715;PF00400;PF00400)' T '31.1' 'cell.organisation' 'niben101scf25394_125730-139095' '(at5g47820 : 1434.0) encodes a kinesin-like protein with an N-terminal microtubule binding motor domain. Protein is localized to the periphery of the cytoplasm and mutants in the gene exhibit altered orientation of cellulose microfibrils and reduced mechanical strength of fibers.; FRAGILE FIBER 1 (FRA1); CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT3G50240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35465 : 629.0) no description available & (gnl|cdd|30094 : 522.0) no description available & (p46869|fla10_chlre : 240.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2868.0) & (original description: Putative KIN4A, Description = Kinesin-like protein KIN-4A, PFAM = PF00225)' T '31.1' 'cell.organisation' 'niben101scf28115_202927-211185' '(at5g02130 : 375.0) mutant has Growth rate reduction, increased salt sensitivity; Putative Kinesin Light Chain; NDP1; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990); Has 225 Blast hits to 173 proteins in 57 species: Archae - 4; Bacteria - 100; Metazoa - 49; Fungi - 9; Plants - 38; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 750.0) & (original description: Putative NDP1, Description = At5g02130, PFAM = )' T '31.1' 'cell.organisation' 'niben101scf28259_62318-65799' '(at1g01820 : 389.0) member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation.; peroxin 11c (PEX11C); CONTAINS InterPro DOMAIN/s: Peroxisomal biogenesis factor 11 (InterPro:IPR008733); BEST Arabidopsis thaliana protein match is: peroxin 11D (TAIR:AT2G45740.3); Has 289 Blast hits to 289 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 41; Plants - 179; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|39388 : 216.0) no description available & (gnl|cdd|86907 : 175.0) no description available & (reliability: 778.0) & (original description: Putative PEX11C, Description = Peroxisomal membrane protein 11C, PFAM = PF05648)' T '31.1.1' 'cell.organisation.cytoskeleton' '' '' '31.1.1.1' 'cell.organisation.cytoskeleton.actin' '' '' '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'nbv0.3scaffold20046_17500-20938' '(at5g09810 : 733.0) Member of Actin gene family.Mutants are defective in germination and root growth.; actin 7 (ACT7); FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, nucleolus, cell wall, cytoskeleton, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15241 Blast hits to 14839 proteins in 3047 species: Archae - 8; Bacteria - 21; Metazoa - 5732; Fungi - 5247; Plants - 1603; Viruses - 2; Other Eukaryotes - 2628 (source: NCBI BLink). & (p17299|act3_orysa : 724.0) Actin-3 - Oryza sativa (Rice) & (gnl|cdd|35895 : 608.0) no description available & (gnl|cdd|84448 : 546.0) no description available & (reliability: 1466.0) & (original description: Putative g11666, Description = Putative actin, PFAM = PF00022)' T '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'nbv0.3scaffold27789_16340-20072' '(o81221|act_goshi : 722.0) Actin - Gossypium hirsutum (Upland cotton) & (at3g53750 : 718.0) Member of the Actin gene family. Expressed in mature pollen.; actin 3 (ACT3); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: cytoskeleton organization; LOCATED IN: cell wall, cytoskeleton, nucleus; EXPRESSED IN: male gametophyte, seed; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 1 (TAIR:AT2G37620.2); Has 15230 Blast hits to 14806 proteins in 3046 species: Archae - 8; Bacteria - 15; Metazoa - 5741; Fungi - 5229; Plants - 1611; Viruses - 2; Other Eukaryotes - 2624 (source: NCBI BLink). & (gnl|cdd|35895 : 593.0) no description available & (gnl|cdd|28896 : 539.0) no description available & (reliability: 1436.0) & (original description: Putative act, Description = Actin, PFAM = PF00022)' T '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'nbv0.5scaffold2670_18145-21299' '(at5g09810 : 634.0) Member of Actin gene family.Mutants are defective in germination and root growth.; actin 7 (ACT7); FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, nucleolus, cell wall, cytoskeleton, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15241 Blast hits to 14839 proteins in 3047 species: Archae - 8; Bacteria - 21; Metazoa - 5732; Fungi - 5247; Plants - 1603; Viruses - 2; Other Eukaryotes - 2628 (source: NCBI BLink). & (p30164|act1_pea : 634.0) Actin-1 - Pisum sativum (Garden pea) & (gnl|cdd|35895 : 535.0) no description available & (gnl|cdd|28896 : 496.0) no description available & (reliability: 1268.0) & (original description: Putative act, Description = Actin, PFAM = PF00022)' T '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'nbv0.5scaffold2774_39975-42460' '(p93587|act1_soltu : 300.0) Actin-42 (Fragment) - Solanum tuberosum (Potato) & (at5g09810 : 293.0) Member of Actin gene family.Mutants are defective in germination and root growth.; actin 7 (ACT7); FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, nucleolus, cell wall, cytoskeleton, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15241 Blast hits to 14839 proteins in 3047 species: Archae - 8; Bacteria - 21; Metazoa - 5732; Fungi - 5247; Plants - 1603; Viruses - 2; Other Eukaryotes - 2628 (source: NCBI BLink). & (gnl|cdd|35895 : 251.0) no description available & (gnl|cdd|28896 : 228.0) no description available & (reliability: 586.0) & (original description: Putative act, Description = Actin, PFAM = PF00022)' T '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'nbv0.5scaffold4968_101345-108203' '(p93376|act6_tobac : 404.0) Actin-103 (Fragment) - Nicotiana tabacum (Common tobacco) & (at5g09810 : 403.0) Member of Actin gene family.Mutants are defective in germination and root growth.; actin 7 (ACT7); FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, nucleolus, cell wall, cytoskeleton, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15241 Blast hits to 14839 proteins in 3047 species: Archae - 8; Bacteria - 21; Metazoa - 5732; Fungi - 5247; Plants - 1603; Viruses - 2; Other Eukaryotes - 2628 (source: NCBI BLink). & (gnl|cdd|35895 : 342.0) no description available & (gnl|cdd|28896 : 300.0) no description available & (reliability: 806.0) & (original description: Putative act, Description = Actin, PFAM = PF00022)' T '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'niben044scf00002538ctg001_3627-7088' '(p30171|act11_soltu : 605.0) Actin-97 - Solanum tuberosum (Potato) & (at5g09810 : 597.0) Member of Actin gene family.Mutants are defective in germination and root growth.; actin 7 (ACT7); FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, nucleolus, cell wall, cytoskeleton, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15241 Blast hits to 14839 proteins in 3047 species: Archae - 8; Bacteria - 21; Metazoa - 5732; Fungi - 5247; Plants - 1603; Viruses - 2; Other Eukaryotes - 2628 (source: NCBI BLink). & (gnl|cdd|35895 : 517.0) no description available & (gnl|cdd|84448 : 473.0) no description available & (reliability: 1194.0) & (original description: Putative act, Description = Actin, PFAM = PF00022)' T '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'niben044scf00002744ctg003_1217-4794' '(at5g09810 : 744.0) Member of Actin gene family.Mutants are defective in germination and root growth.; actin 7 (ACT7); FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, nucleolus, cell wall, cytoskeleton, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15241 Blast hits to 14839 proteins in 3047 species: Archae - 8; Bacteria - 21; Metazoa - 5732; Fungi - 5247; Plants - 1603; Viruses - 2; Other Eukaryotes - 2628 (source: NCBI BLink). & (p30167|act3_soltu : 741.0) Actin-58 - Solanum tuberosum (Potato) & (gnl|cdd|35895 : 630.0) no description available & (gnl|cdd|28896 : 576.0) no description available & (reliability: 1488.0) & (original description: Putative ACT7, Description = Actin-7, PFAM = PF00022)' T '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'niben044scf00058812ctg000_10806-14899' '(q05214|act1_tobac : 769.0) Actin - Nicotiana tabacum (Common tobacco) & (at3g12110 : 761.0) Encodes an actin that is expressed predominantly during reproductive development.; actin-11 (ACT11); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: response to cyclopentenone, actin cytoskeleton organization; LOCATED IN: mitochondrion, cytoskeleton, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15186 Blast hits to 14782 proteins in 3039 species: Archae - 6; Bacteria - 12; Metazoa - 5717; Fungi - 5233; Plants - 1598; Viruses - 2; Other Eukaryotes - 2618 (source: NCBI BLink). & (gnl|cdd|35895 : 634.0) no description available & (gnl|cdd|84448 : 577.0) no description available & (reliability: 1522.0) & (original description: Putative ACT7, Description = Actin-7, PFAM = PF00022)' T '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'niben044scf00059429ctg001_326-3507' '(at5g09810 : 602.0) Member of Actin gene family.Mutants are defective in germination and root growth.; actin 7 (ACT7); FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, nucleolus, cell wall, cytoskeleton, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15241 Blast hits to 14839 proteins in 3047 species: Archae - 8; Bacteria - 21; Metazoa - 5732; Fungi - 5247; Plants - 1603; Viruses - 2; Other Eukaryotes - 2628 (source: NCBI BLink). & (p30164|act1_pea : 600.0) Actin-1 - Pisum sativum (Garden pea) & (gnl|cdd|35895 : 522.0) no description available & (gnl|cdd|28896 : 478.0) no description available & (reliability: 1204.0) & (original description: Putative act, Description = Actin, PFAM = PF00022)' T '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'niben101ctg15750_2922-4986' '(p13362|act1_orysa : 163.0) Actin-1 - Oryza sativa (Rice) & (at3g18780 : 162.0) Encodes an actin that is constitutively expressed in vegetative structures but not pollen. ACT2 is involved in tip growth of root hairs.; actin 2 (ACT2); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: in 7 processes; LOCATED IN: nucleus, membrane, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 8 (TAIR:AT1G49240.1); Has 15142 Blast hits to 14749 proteins in 3039 species: Archae - 6; Bacteria - 12; Metazoa - 5705; Fungi - 5217; Plants - 1599; Viruses - 2; Other Eukaryotes - 2601 (source: NCBI BLink). & (gnl|cdd|35895 : 149.0) no description available & (gnl|cdd|84448 : 142.0) no description available & (reliability: 324.0) & (original description: Putative act, Description = Actin, PFAM = PF00022)' T '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'niben101scf00096_414662-418386' '(o81221|act_goshi : 722.0) Actin - Gossypium hirsutum (Upland cotton) & (at3g53750 : 717.0) Member of the Actin gene family. Expressed in mature pollen.; actin 3 (ACT3); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: cytoskeleton organization; LOCATED IN: cell wall, cytoskeleton, nucleus; EXPRESSED IN: male gametophyte, seed; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 1 (TAIR:AT2G37620.2); Has 15230 Blast hits to 14806 proteins in 3046 species: Archae - 8; Bacteria - 15; Metazoa - 5741; Fungi - 5229; Plants - 1611; Viruses - 2; Other Eukaryotes - 2624 (source: NCBI BLink). & (gnl|cdd|35895 : 593.0) no description available & (gnl|cdd|28896 : 539.0) no description available & (reliability: 1434.0) & (original description: Putative act, Description = Actin, PFAM = PF00022)' T '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'niben101scf00444_84800-88348' '(q05214|act1_tobac : 744.0) Actin - Nicotiana tabacum (Common tobacco) & (at3g12110 : 740.0) Encodes an actin that is expressed predominantly during reproductive development.; actin-11 (ACT11); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: response to cyclopentenone, actin cytoskeleton organization; LOCATED IN: mitochondrion, cytoskeleton, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15186 Blast hits to 14782 proteins in 3039 species: Archae - 6; Bacteria - 12; Metazoa - 5717; Fungi - 5233; Plants - 1598; Viruses - 2; Other Eukaryotes - 2618 (source: NCBI BLink). & (gnl|cdd|35895 : 631.0) no description available & (gnl|cdd|84448 : 575.0) no description available & (reliability: 1480.0) & (original description: Putative ACTII, Description = Actin-2, PFAM = PF00022)' T '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'niben101scf00646_702091-705507' '(p30173|act13_soltu : 706.0) Actin-101 - Solanum tuberosum (Potato) & (at3g12110 : 692.0) Encodes an actin that is expressed predominantly during reproductive development.; actin-11 (ACT11); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: response to cyclopentenone, actin cytoskeleton organization; LOCATED IN: mitochondrion, cytoskeleton, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15186 Blast hits to 14782 proteins in 3039 species: Archae - 6; Bacteria - 12; Metazoa - 5717; Fungi - 5233; Plants - 1598; Viruses - 2; Other Eukaryotes - 2618 (source: NCBI BLink). & (gnl|cdd|35895 : 584.0) no description available & (gnl|cdd|28896 : 539.0) no description available & (reliability: 1384.0) & (original description: Putative act, Description = Actin, PFAM = PF00022)' T '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'niben101scf00672_50435-53565' '(at5g09810 : 691.0) Member of Actin gene family.Mutants are defective in germination and root growth.; actin 7 (ACT7); FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, nucleolus, cell wall, cytoskeleton, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15241 Blast hits to 14839 proteins in 3047 species: Archae - 8; Bacteria - 21; Metazoa - 5732; Fungi - 5247; Plants - 1603; Viruses - 2; Other Eukaryotes - 2628 (source: NCBI BLink). & (p30171|act11_soltu : 686.0) Actin-97 - Solanum tuberosum (Potato) & (gnl|cdd|35895 : 578.0) no description available & (gnl|cdd|84448 : 517.0) no description available & (reliability: 1382.0) & (original description: Putative act, Description = Actin, PFAM = PF00022)' T '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'niben101scf01317_93669-98240' '(p30168|act6_soltu : 756.0) Actin-71 - Solanum tuberosum (Potato) & (at3g53750 : 753.0) Member of the Actin gene family. Expressed in mature pollen.; actin 3 (ACT3); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: cytoskeleton organization; LOCATED IN: cell wall, cytoskeleton, nucleus; EXPRESSED IN: male gametophyte, seed; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 1 (TAIR:AT2G37620.2); Has 15230 Blast hits to 14806 proteins in 3046 species: Archae - 8; Bacteria - 15; Metazoa - 5741; Fungi - 5229; Plants - 1611; Viruses - 2; Other Eukaryotes - 2624 (source: NCBI BLink). & (gnl|cdd|35895 : 629.0) no description available & (gnl|cdd|84448 : 574.0) no description available & (reliability: 1506.0) & (original description: Putative SAC1, Description = Actin-1, PFAM = PF00022)' T '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'niben101scf01982_97603-101402' '(q05214|act1_tobac : 761.0) Actin - Nicotiana tabacum (Common tobacco) & (at3g12110 : 755.0) Encodes an actin that is expressed predominantly during reproductive development.; actin-11 (ACT11); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: response to cyclopentenone, actin cytoskeleton organization; LOCATED IN: mitochondrion, cytoskeleton, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15186 Blast hits to 14782 proteins in 3039 species: Archae - 6; Bacteria - 12; Metazoa - 5717; Fungi - 5233; Plants - 1598; Viruses - 2; Other Eukaryotes - 2618 (source: NCBI BLink). & (gnl|cdd|35895 : 631.0) no description available & (gnl|cdd|84448 : 574.0) no description available & (reliability: 1510.0) & (original description: Putative ACTA1, Description = Actin, alpha skeletal muscle, PFAM = PF00022)' T '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'niben101scf02008_32530-36621' '(p30171|act11_soltu : 763.0) Actin-97 - Solanum tuberosum (Potato) & (at3g12110 : 756.0) Encodes an actin that is expressed predominantly during reproductive development.; actin-11 (ACT11); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: response to cyclopentenone, actin cytoskeleton organization; LOCATED IN: mitochondrion, cytoskeleton, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15186 Blast hits to 14782 proteins in 3039 species: Archae - 6; Bacteria - 12; Metazoa - 5717; Fungi - 5233; Plants - 1598; Viruses - 2; Other Eukaryotes - 2618 (source: NCBI BLink). & (gnl|cdd|35895 : 631.0) no description available & (gnl|cdd|84448 : 576.0) no description available & (reliability: 1512.0) & (original description: Putative ACT7, Description = Actin-7, PFAM = PF00022)' T '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'niben101scf02119_78148-82034' '(o81221|act_goshi : 743.0) Actin - Gossypium hirsutum (Upland cotton) & (at5g59370 : 742.0) Encodes one of eight Arabidopsis actins. ACT4 belongs to the reproductive actin subclass which is predominantly expressed in developing and reproductive tissues, such as pollen, pollen tubes, ovules, and developing seeds. Expression of the ACT4/GUS fusion was restricted to young vascular tissues, tapetum, and developing and mature pollen.; actin 4 (ACT4); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: actin cytoskeleton organization; LOCATED IN: mitochondrion; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin-12 (TAIR:AT3G46520.1); Has 15130 Blast hits to 14740 proteins in 3013 species: Archae - 8; Bacteria - 8; Metazoa - 5679; Fungi - 5217; Plants - 1603; Viruses - 2; Other Eukaryotes - 2613 (source: NCBI BLink). & (gnl|cdd|35895 : 626.0) no description available & (gnl|cdd|84448 : 575.0) no description available & (reliability: 1484.0) & (original description: Putative AC75, Description = Actin-75, PFAM = PF00022)' T '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'niben101scf02517_1686493-1689776' '(q05214|act1_tobac : 439.0) Actin - Nicotiana tabacum (Common tobacco) & (at3g46520 : 437.0) Member of actin subclass composed of ACT12 and ACT4. RNA is expressed at very low levels in vegetative organs, low levels in flowers and very high levels in pollen. Expression of an ACT12/GUS fusion was found in vascular tissues, tapetum, developing and mature pollen, the root cap and in a ring of pericycle tissues during lateral root initiation and early development.; actin-12 (ACT12); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: cytoskeleton organization; LOCATED IN: mitochondrion, cytoskeleton; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 4 (TAIR:AT5G59370.2); Has 15176 Blast hits to 14784 proteins in 3040 species: Archae - 8; Bacteria - 8; Metazoa - 5711; Fungi - 5220; Plants - 1602; Viruses - 2; Other Eukaryotes - 2625 (source: NCBI BLink). & (gnl|cdd|35895 : 354.0) no description available & (gnl|cdd|28896 : 324.0) no description available & (reliability: 874.0) & (original description: Putative act, Description = Actin, PFAM = PF00022;PF00022)' T '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'niben101scf03410_250475-253882' '(at5g09810 : 767.0) Member of Actin gene family.Mutants are defective in germination and root growth.; actin 7 (ACT7); FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, nucleolus, cell wall, cytoskeleton, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15241 Blast hits to 14839 proteins in 3047 species: Archae - 8; Bacteria - 21; Metazoa - 5732; Fungi - 5247; Plants - 1603; Viruses - 2; Other Eukaryotes - 2628 (source: NCBI BLink). & (p17299|act3_orysa : 758.0) Actin-3 - Oryza sativa (Rice) & (gnl|cdd|35895 : 633.0) no description available & (gnl|cdd|84448 : 575.0) no description available & (reliability: 1534.0) & (original description: Putative ACT7, Description = Actin-7, PFAM = PF00022)' T '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'niben101scf03493_54600-58417' '(p30171|act11_soltu : 765.0) Actin-97 - Solanum tuberosum (Potato) & (at5g09810 : 763.0) Member of Actin gene family.Mutants are defective in germination and root growth.; actin 7 (ACT7); FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, nucleolus, cell wall, cytoskeleton, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15241 Blast hits to 14839 proteins in 3047 species: Archae - 8; Bacteria - 21; Metazoa - 5732; Fungi - 5247; Plants - 1603; Viruses - 2; Other Eukaryotes - 2628 (source: NCBI BLink). & (gnl|cdd|35895 : 630.0) no description available & (gnl|cdd|84448 : 571.0) no description available & (reliability: 1526.0) & (original description: Putative ACT7, Description = Actin-7, PFAM = PF00022)' T '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'niben101scf04140_97639-101422' '(p30173|act13_soltu : 768.0) Actin-101 - Solanum tuberosum (Potato) & (at3g12110 : 758.0) Encodes an actin that is expressed predominantly during reproductive development.; actin-11 (ACT11); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: response to cyclopentenone, actin cytoskeleton organization; LOCATED IN: mitochondrion, cytoskeleton, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15186 Blast hits to 14782 proteins in 3039 species: Archae - 6; Bacteria - 12; Metazoa - 5717; Fungi - 5233; Plants - 1598; Viruses - 2; Other Eukaryotes - 2618 (source: NCBI BLink). & (gnl|cdd|35895 : 634.0) no description available & (gnl|cdd|84448 : 579.0) no description available & (reliability: 1516.0) & (original description: Putative act1, Description = Major actin, PFAM = PF00022)' T '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'niben101scf06087_199318-202756' '(at5g09810 : 766.0) Member of Actin gene family.Mutants are defective in germination and root growth.; actin 7 (ACT7); FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, nucleolus, cell wall, cytoskeleton, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15241 Blast hits to 14839 proteins in 3047 species: Archae - 8; Bacteria - 21; Metazoa - 5732; Fungi - 5247; Plants - 1603; Viruses - 2; Other Eukaryotes - 2628 (source: NCBI BLink). & (p17299|act3_orysa : 759.0) Actin-3 - Oryza sativa (Rice) & (gnl|cdd|35895 : 634.0) no description available & (gnl|cdd|84448 : 577.0) no description available & (reliability: 1532.0) & (original description: Putative act, Description = Actin, PFAM = PF00022)' T '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'niben101scf06954_25749-367783' '(p93376|act6_tobac : 412.0) Actin-103 (Fragment) - Nicotiana tabacum (Common tobacco) & (at5g09810 : 405.0) Member of Actin gene family.Mutants are defective in germination and root growth.; actin 7 (ACT7); FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, nucleolus, cell wall, cytoskeleton, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15241 Blast hits to 14839 proteins in 3047 species: Archae - 8; Bacteria - 21; Metazoa - 5732; Fungi - 5247; Plants - 1603; Viruses - 2; Other Eukaryotes - 2628 (source: NCBI BLink). & (gnl|cdd|35895 : 343.0) no description available & (gnl|cdd|28896 : 304.0) no description available & (reliability: 810.0) & (original description: Putative act, Description = Actin, PFAM = PF00022)' T '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'niben101scf07140_80753-84477' '(at5g09810 : 743.0) Member of Actin gene family.Mutants are defective in germination and root growth.; actin 7 (ACT7); FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, nucleolus, cell wall, cytoskeleton, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15241 Blast hits to 14839 proteins in 3047 species: Archae - 8; Bacteria - 21; Metazoa - 5732; Fungi - 5247; Plants - 1603; Viruses - 2; Other Eukaryotes - 2628 (source: NCBI BLink). & (p30167|act3_soltu : 742.0) Actin-58 - Solanum tuberosum (Potato) & (gnl|cdd|35895 : 629.0) no description available & (gnl|cdd|28896 : 575.0) no description available & (reliability: 1486.0) & (original description: Putative ACT7, Description = Actin-7, PFAM = PF00022)' T '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'niben101scf20549_25342-29447' '(q05214|act1_tobac : 765.0) Actin - Nicotiana tabacum (Common tobacco) & (at3g12110 : 758.0) Encodes an actin that is expressed predominantly during reproductive development.; actin-11 (ACT11); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: response to cyclopentenone, actin cytoskeleton organization; LOCATED IN: mitochondrion, cytoskeleton, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15186 Blast hits to 14782 proteins in 3039 species: Archae - 6; Bacteria - 12; Metazoa - 5717; Fungi - 5233; Plants - 1598; Viruses - 2; Other Eukaryotes - 2618 (source: NCBI BLink). & (gnl|cdd|35895 : 632.0) no description available & (gnl|cdd|84448 : 574.0) no description available & (reliability: 1516.0) & (original description: Putative ACT7, Description = Actin-7, PFAM = PF00022)' T '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'niben101scf28062_28523-31958' '(p30173|act13_soltu : 733.0) Actin-101 - Solanum tuberosum (Potato) & (at3g12110 : 729.0) Encodes an actin that is expressed predominantly during reproductive development.; actin-11 (ACT11); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: response to cyclopentenone, actin cytoskeleton organization; LOCATED IN: mitochondrion, cytoskeleton, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15186 Blast hits to 14782 proteins in 3039 species: Archae - 6; Bacteria - 12; Metazoa - 5717; Fungi - 5233; Plants - 1598; Viruses - 2; Other Eukaryotes - 2618 (source: NCBI BLink). & (gnl|cdd|35895 : 623.0) no description available & (gnl|cdd|84448 : 576.0) no description available & (reliability: 1458.0) & (original description: Putative fia, Description = Actin domain-containing protein, PFAM = PF00022)' T '31.1.1.1.2' 'cell.organisation.cytoskeleton.actin.actin depolymerizing factors' 'nbv0.3scaffold61574_9422-11470' '(at2g16700 : 219.0) Encodes actin depolymerizing factor 5 (ADF5).; actin depolymerizing factor 5 (ADF5); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diguanylate phosphodiesterase, predicted (InterPro:IPR001633), Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 9 (TAIR:AT4G34970.1). & (q8sag3|adf_vitvi : 178.0) Actin-depolymerizing factor (ADF) - Vitis vinifera (Grape) & (gnl|cdd|36946 : 160.0) no description available & (gnl|cdd|28897 : 138.0) no description available & (reliability: 438.0) & (original description: Putative ADF5, Description = Actin-depolymerizing factor 5, PFAM = PF00241)' T '31.1.1.1.2' 'cell.organisation.cytoskeleton.actin.actin depolymerizing factors' 'nbv0.5scaffold1878_389290-394398' '(at2g31200 : 229.0) Encodes actin depolymerizing factor 6 (ADF6).; actin depolymerizing factor 6 (ADF6); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 1 (TAIR:AT3G46010.2); Has 1444 Blast hits to 1440 proteins in 268 species: Archae - 0; Bacteria - 3; Metazoa - 597; Fungi - 161; Plants - 515; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (q8sag3|adf_vitvi : 222.0) Actin-depolymerizing factor (ADF) - Vitis vinifera (Grape) & (gnl|cdd|36946 : 180.0) no description available & (gnl|cdd|28897 : 156.0) no description available & (reliability: 458.0) & (original description: Putative ADF6, Description = Actin-depolymerizing factor 6, PFAM = PF00241)' T '31.1.1.1.2' 'cell.organisation.cytoskeleton.actin.actin depolymerizing factors' 'niben101scf00223_448008-451069' '(q9fvi1|adf2_pethy : 237.0) Actin-depolymerizing factor 2 (ADF 2) - Petunia hybrida (Petunia) & (at5g59880 : 229.0) Encodes actin depolymerizing factor 3 (ADF3).; actin depolymerizing factor 3 (ADF3); FUNCTIONS IN: actin binding; INVOLVED IN: response to oxidative stress, response to cadmium ion; LOCATED IN: mitochondrion, intracellular, chloroplast, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 1 (TAIR:AT3G46010.1); Has 1140 Blast hits to 1140 proteins in 246 species: Archae - 0; Bacteria - 3; Metazoa - 383; Fungi - 126; Plants - 514; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (gnl|cdd|36946 : 183.0) no description available & (gnl|cdd|28897 : 146.0) no description available & (reliability: 458.0) & (original description: Putative ADF3, Description = Actin-depolymerizing factor 3, PFAM = PF00241)' T '31.1.1.1.2' 'cell.organisation.cytoskeleton.actin.actin depolymerizing factors' 'niben101scf00449_515177-518503' '(q9fvi1|adf2_pethy : 265.0) Actin-depolymerizing factor 2 (ADF 2) - Petunia hybrida (Petunia) & (at5g59890 : 236.0) actin depolymerizing factor 4 (ADF4) mRNA, complete cds; actin depolymerizing factor 4 (ADF4); FUNCTIONS IN: actin binding; INVOLVED IN: defense response signaling pathway, resistance gene-dependent, defense response to bacterium; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 1 (TAIR:AT3G46010.2); Has 1456 Blast hits to 1455 proteins in 265 species: Archae - 0; Bacteria - 5; Metazoa - 592; Fungi - 174; Plants - 513; Viruses - 0; Other Eukaryotes - 172 (source: NCBI BLink). & (gnl|cdd|36946 : 193.0) no description available & (gnl|cdd|28897 : 153.0) no description available & (reliability: 472.0) & (original description: Putative ADF2, Description = Actin-depolymerizing factor 2, PFAM = PF00241)' T '31.1.1.1.2' 'cell.organisation.cytoskeleton.actin.actin depolymerizing factors' 'niben101scf01090_251475-255243' '(q8sag3|adf_vitvi : 212.0) Actin-depolymerizing factor (ADF) - Vitis vinifera (Grape) & (at2g31200 : 193.0) Encodes actin depolymerizing factor 6 (ADF6).; actin depolymerizing factor 6 (ADF6); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 1 (TAIR:AT3G46010.2); Has 1444 Blast hits to 1440 proteins in 268 species: Archae - 0; Bacteria - 3; Metazoa - 597; Fungi - 161; Plants - 515; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (gnl|cdd|36946 : 177.0) no description available & (gnl|cdd|28897 : 156.0) no description available & (reliability: 386.0) & (original description: Putative adf, Description = Actin-depolymerizing factor, PFAM = PF00241)' T '31.1.1.1.2' 'cell.organisation.cytoskeleton.actin.actin depolymerizing factors' 'niben101scf01841_123355-126013' '(q9fvi2|adf1_pethy : 229.0) Actin-depolymerizing factor 1 (ADF 1) - Petunia hybrida (Petunia) & (at5g59890 : 214.0) actin depolymerizing factor 4 (ADF4) mRNA, complete cds; actin depolymerizing factor 4 (ADF4); FUNCTIONS IN: actin binding; INVOLVED IN: defense response signaling pathway, resistance gene-dependent, defense response to bacterium; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 1 (TAIR:AT3G46010.2); Has 1456 Blast hits to 1455 proteins in 265 species: Archae - 0; Bacteria - 5; Metazoa - 592; Fungi - 174; Plants - 513; Viruses - 0; Other Eukaryotes - 172 (source: NCBI BLink). & (gnl|cdd|36946 : 197.0) no description available & (gnl|cdd|28897 : 156.0) no description available & (reliability: 428.0) & (original description: Putative ADF1, Description = Actin-depolymerizing factor 1, PFAM = PF00241)' T '31.1.1.1.2' 'cell.organisation.cytoskeleton.actin.actin depolymerizing factors' 'niben101scf03088_425849-428520' '(q9fvi1|adf2_pethy : 238.0) Actin-depolymerizing factor 2 (ADF 2) - Petunia hybrida (Petunia) & (at5g59890 : 234.0) actin depolymerizing factor 4 (ADF4) mRNA, complete cds; actin depolymerizing factor 4 (ADF4); FUNCTIONS IN: actin binding; INVOLVED IN: defense response signaling pathway, resistance gene-dependent, defense response to bacterium; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 1 (TAIR:AT3G46010.2); Has 1456 Blast hits to 1455 proteins in 265 species: Archae - 0; Bacteria - 5; Metazoa - 592; Fungi - 174; Plants - 513; Viruses - 0; Other Eukaryotes - 172 (source: NCBI BLink). & (gnl|cdd|36946 : 187.0) no description available & (gnl|cdd|28897 : 150.0) no description available & (reliability: 468.0) & (original description: Putative ADF2, Description = Actin-depolymerizing factor 2, PFAM = PF00241)' T '31.1.1.1.2' 'cell.organisation.cytoskeleton.actin.actin depolymerizing factors' 'niben101scf04212_116341-119966' '(at2g16700 : 237.0) Encodes actin depolymerizing factor 5 (ADF5).; actin depolymerizing factor 5 (ADF5); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diguanylate phosphodiesterase, predicted (InterPro:IPR001633), Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 9 (TAIR:AT4G34970.1). & (q8sag3|adf_vitvi : 178.0) Actin-depolymerizing factor (ADF) - Vitis vinifera (Grape) & (gnl|cdd|36946 : 166.0) no description available & (gnl|cdd|28897 : 140.0) no description available & (reliability: 474.0) & (original description: Putative ADF5, Description = Actin-depolymerizing factor 5, PFAM = PF00241)' T '31.1.1.1.2' 'cell.organisation.cytoskeleton.actin.actin depolymerizing factors' 'niben101scf04874_99485-103490' '(at1g01750 : 198.0) actin depolymerizing factor 11 (ADF11); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 8 (TAIR:AT4G00680.1); Has 1654 Blast hits to 1631 proteins in 274 species: Archae - 0; Bacteria - 5; Metazoa - 781; Fungi - 163; Plants - 515; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (p30175|adf_lillo : 192.0) Actin-depolymerizing factor (ADF) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|36946 : 177.0) no description available & (gnl|cdd|28897 : 151.0) no description available & (reliability: 396.0) & (original description: Putative ADF12, Description = Actin-depolymerizing factor 12, PFAM = PF00241)' T '31.1.1.1.2' 'cell.organisation.cytoskeleton.actin.actin depolymerizing factors' 'niben101scf05767_96344-99123' '(at4g25590 : 243.0) actin depolymerizing factor 7 (ADF7); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 10 (TAIR:AT5G52360.1); Has 1500 Blast hits to 1497 proteins in 263 species: Archae - 0; Bacteria - 3; Metazoa - 654; Fungi - 151; Plants - 513; Viruses - 0; Other Eukaryotes - 179 (source: NCBI BLink). & (q9fvi1|adf2_pethy : 214.0) Actin-depolymerizing factor 2 (ADF 2) - Petunia hybrida (Petunia) & (gnl|cdd|36946 : 183.0) no description available & (gnl|cdd|28897 : 146.0) no description available & (reliability: 486.0) & (original description: Putative ADF7, Description = Actin-depolymerizing factor 7, PFAM = PF00241)' T '31.1.1.1.2' 'cell.organisation.cytoskeleton.actin.actin depolymerizing factors' 'niben101scf08081_49747-54184' '(at1g01750 : 193.0) actin depolymerizing factor 11 (ADF11); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 8 (TAIR:AT4G00680.1); Has 1654 Blast hits to 1631 proteins in 274 species: Archae - 0; Bacteria - 5; Metazoa - 781; Fungi - 163; Plants - 515; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (p30175|adf_lillo : 186.0) Actin-depolymerizing factor (ADF) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|36946 : 180.0) no description available & (gnl|cdd|28897 : 150.0) no description available & (reliability: 386.0) & (original description: Putative ADF10, Description = Actin-depolymerizing factor 10, PFAM = PF00241)' T '31.1.1.1.2' 'cell.organisation.cytoskeleton.actin.actin depolymerizing factors' 'niben101scf15568_78778-82465' '(at1g01750 : 187.0) actin depolymerizing factor 11 (ADF11); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 8 (TAIR:AT4G00680.1); Has 1654 Blast hits to 1631 proteins in 274 species: Archae - 0; Bacteria - 5; Metazoa - 781; Fungi - 163; Plants - 515; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (p30175|adf_lillo : 179.0) Actin-depolymerizing factor (ADF) - Lilium longiflorum (Trumpet lily) & (gnl|cdd|36946 : 178.0) no description available & (gnl|cdd|28897 : 149.0) no description available & (reliability: 374.0) & (original description: Putative ADF12, Description = Actin-depolymerizing factor 12, PFAM = PF00241)' T '31.1.1.1.3' 'cell.organisation.cytoskeleton.actin.actin binding' 'niben101scf01798_539089-566243' '(at4g30160 : 1369.0) Arabidopsis thaliana VILLIN4; villin 4 (VLN4); FUNCTIONS IN: actin binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gelsolin (InterPro:IPR007122), Villin headpiece (InterPro:IPR003128), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: villin, putative (TAIR:AT5G57320.1). & (gnl|cdd|35664 : 946.0) no description available & (gnl|cdd|47591 : 89.7) no description available & (reliability: 2738.0) & (original description: Putative VLN4, Description = Villin-4, PFAM = PF02209;PF00626;PF00626;PF00626;PF00626)' T '31.1.1.1.3' 'cell.organisation.cytoskeleton.actin.actin binding' 'niben101scf02690_146635-158696' '(at2g41740 : 1216.0) Encodes a protein with high homology to animal villin.; villin 2 (VLN2); FUNCTIONS IN: actin binding, protein binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gelsolin (InterPro:IPR007122), Villin headpiece (InterPro:IPR003128), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: villin 3 (TAIR:AT3G57410.1); Has 3753 Blast hits to 2353 proteins in 268 species: Archae - 0; Bacteria - 52; Metazoa - 2426; Fungi - 285; Plants - 242; Viruses - 2; Other Eukaryotes - 746 (source: NCBI BLink). & (gnl|cdd|35664 : 901.0) no description available & (gnl|cdd|47591 : 82.0) no description available & (reliability: 2432.0) & (original description: Putative VLN3, Description = Villin-3, PFAM = PF00626;PF00626;PF00626;PF00626;PF00626;PF00626;PF02209)' T '31.1.1.1.3' 'cell.organisation.cytoskeleton.actin.actin binding' 'niben101scf03708_158314-195569' '(at4g30160 : 1373.0) Arabidopsis thaliana VILLIN4; villin 4 (VLN4); FUNCTIONS IN: actin binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gelsolin (InterPro:IPR007122), Villin headpiece (InterPro:IPR003128), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: villin, putative (TAIR:AT5G57320.1). & (gnl|cdd|35664 : 950.0) no description available & (gnl|cdd|47591 : 89.7) no description available & (reliability: 2746.0) & (original description: Putative VLN4, Description = Villin-4, PFAM = PF02209;PF00626;PF00626;PF00626;PF00626)' T '31.1.1.1.3' 'cell.organisation.cytoskeleton.actin.actin binding' 'niben101scf12711_130696-143174' '(at2g41740 : 1209.0) Encodes a protein with high homology to animal villin.; villin 2 (VLN2); FUNCTIONS IN: actin binding, protein binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gelsolin (InterPro:IPR007122), Villin headpiece (InterPro:IPR003128), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: villin 3 (TAIR:AT3G57410.1); Has 3753 Blast hits to 2353 proteins in 268 species: Archae - 0; Bacteria - 52; Metazoa - 2426; Fungi - 285; Plants - 242; Viruses - 2; Other Eukaryotes - 746 (source: NCBI BLink). & (gnl|cdd|35664 : 897.0) no description available & (gnl|cdd|47591 : 85.4) no description available & (reliability: 2418.0) & (original description: Putative VLN2, Description = Villin-2, PFAM = PF00626;PF00626;PF00626;PF00626;PF00626;PF00626;PF02209)' T '31.1.1.1.3.5' 'cell.organisation.cytoskeleton.actin.actin binding.actin capping' '' '' '31.1.1.1.3.5.1' 'cell.organisation.cytoskeleton.actin.actin binding.actin capping.alpha SU' 'nbv0.3scaffold27568_10912-19824' '(at3g05520 : 382.0) Subunits of heterodimeric actin filament capping protein Capz superfamily; FUNCTIONS IN: actin binding; INVOLVED IN: actin cytoskeleton organization; LOCATED IN: F-actin capping protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-actin capping protein, alpha subunit, actin binding (InterPro:IPR018315), F-actin capping protein, alpha subunit (InterPro:IPR002189), F-actin capping protein, alpha subunit, conserved site (InterPro:IPR017865); Has 69 Blast hits to 69 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 37; Fungi - 15; Plants - 8; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|36054 : 225.0) no description available & (gnl|cdd|85350 : 150.0) no description available & (reliability: 764.0) & (original description: Putative At3g05520, Description = F-actin-capping protein subunit alpha, PFAM = PF01267)' T '31.1.1.1.3.5.1' 'cell.organisation.cytoskeleton.actin.actin binding.actin capping.alpha SU' 'niben044scf00036709ctg007_1-2858' '(at3g05520 : 139.0) Subunits of heterodimeric actin filament capping protein Capz superfamily; FUNCTIONS IN: actin binding; INVOLVED IN: actin cytoskeleton organization; LOCATED IN: F-actin capping protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-actin capping protein, alpha subunit, actin binding (InterPro:IPR018315), F-actin capping protein, alpha subunit (InterPro:IPR002189), F-actin capping protein, alpha subunit, conserved site (InterPro:IPR017865); Has 69 Blast hits to 69 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 37; Fungi - 15; Plants - 8; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|36054 : 98.9) no description available & (reliability: 278.0) & (original description: Putative At3g05520, Description = F-actin-capping protein subunit alpha, PFAM = PF01267)' T '31.1.1.1.3.5.1' 'cell.organisation.cytoskeleton.actin.actin binding.actin capping.alpha SU' 'niben101scf00369_900899-910156' '(at3g05520 : 456.0) Subunits of heterodimeric actin filament capping protein Capz superfamily; FUNCTIONS IN: actin binding; INVOLVED IN: actin cytoskeleton organization; LOCATED IN: F-actin capping protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-actin capping protein, alpha subunit, actin binding (InterPro:IPR018315), F-actin capping protein, alpha subunit (InterPro:IPR002189), F-actin capping protein, alpha subunit, conserved site (InterPro:IPR017865); Has 69 Blast hits to 69 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 37; Fungi - 15; Plants - 8; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|36054 : 284.0) no description available & (gnl|cdd|85350 : 193.0) no description available & (reliability: 912.0) & (original description: Putative At3g05520, Description = F-actin-capping protein subunit alpha, PFAM = PF01267)' T '31.1.1.1.3.5.2' 'cell.organisation.cytoskeleton.actin.actin binding.actin capping.beta SU' 'niben044scf00002766ctg000_1-8886' '(at1g71790 : 371.0) Subunits of heterodimeric actin filament capping protein Capz superfamily; FUNCTIONS IN: actin binding; INVOLVED IN: actin cytoskeleton organization; LOCATED IN: F-actin capping protein complex, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-actin capping protein, beta subunit conserved site (InterPro:IPR019771), F-actin capping protein, beta subunit (InterPro:IPR001698); Has 482 Blast hits to 480 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 232; Fungi - 143; Plants - 34; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|64950 : 238.0) no description available & (gnl|cdd|38384 : 220.0) no description available & (reliability: 742.0) & (original description: Putative abpE, Description = F-actin-capping protein subunit beta, PFAM = PF01115)' T '31.1.1.1.3.5.2' 'cell.organisation.cytoskeleton.actin.actin binding.actin capping.beta SU' 'niben101scf09649_324577-340088' '(at1g71790 : 404.0) Subunits of heterodimeric actin filament capping protein Capz superfamily; FUNCTIONS IN: actin binding; INVOLVED IN: actin cytoskeleton organization; LOCATED IN: F-actin capping protein complex, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-actin capping protein, beta subunit conserved site (InterPro:IPR019771), F-actin capping protein, beta subunit (InterPro:IPR001698); Has 482 Blast hits to 480 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 232; Fungi - 143; Plants - 34; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|64950 : 281.0) no description available & (gnl|cdd|38384 : 266.0) no description available & (reliability: 808.0) & (original description: Putative abpE, Description = F-actin-capping protein subunit beta, PFAM = PF01115)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'nbv0.3scaffold4337_2613-11060' '(at1g80260 : 845.0) embryo defective 1427 (emb1427); FUNCTIONS IN: tubulin binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: spindle pole, microtubule organizing center; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G20570.1); Has 1146 Blast hits to 1005 proteins in 166 species: Archae - 0; Bacteria - 0; Metazoa - 591; Fungi - 250; Plants - 182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|37276 : 104.0) no description available & (gnl|cdd|67734 : 96.5) no description available & (reliability: 1690.0) & (original description: Putative emb1427, Description = Gamma-tubulin complex component, PFAM = PF04130)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'nbv0.3scaffold11897_14718-19251' '(gnl|cdd|30217 : 927.0) no description available & (q9zrr5|tba3_horvu : 869.0) Tubulin alpha-3 chain - Hordeum vulgare (Barley) & (at4g14960 : 864.0) Encodes an alpha-tubulin isoform required for right handed helical growth.; TUA6; FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: response to salt stress, microtubule cytoskeleton organization, cellular response to gravity; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-2 chain (TAIR:AT1G50010.1); Has 22664 Blast hits to 22566 proteins in 4681 species: Archae - 4; Bacteria - 25; Metazoa - 4398; Fungi - 13427; Plants - 1532; Viruses - 0; Other Eukaryotes - 3278 (source: NCBI BLink). & (gnl|cdd|36590 : 723.0) no description available & (reliability: 1728.0) & (original description: Putative TUBA1, Description = Tubulin alpha-1 chain, PFAM = PF03953;PF00091)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'nbv0.3scaffold16282_18311-32965' '(at3g43610 : 541.0) Spc97 / Spc98 family of spindle pole body (SBP) component; FUNCTIONS IN: tubulin binding; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: chloroplast, spindle pole, microtubule organizing center; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: spindle pole body component 98 (TAIR:AT5G06680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37211 : 112.0) no description available & (gnl|cdd|67734 : 89.2) no description available & (reliability: 1082.0) & (original description: Putative BnaAnng37470D, Description = Gamma-tubulin complex component, PFAM = PF04130)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'nbv0.3scaffold66043_1756-9968' '(at3g10220 : 342.0) Encodes a tubulin-binding cofactor. Homozygous mutant plants are embryo lethal. Heterozygous mutant plants showed increased ploidy and higher numbers of spindles and phragmoplasts, suggesting a role in cell division.; tubulin folding cofactor B; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: tubulin complex assembly, embryo development, cell division; LOCATED IN: nucleus, cytoplasm, phragmoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytoskeleton-associated protein, CAP-Gly (InterPro:IPR000938); Has 1750 Blast hits to 1417 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 1247; Fungi - 285; Plants - 70; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|38416 : 229.0) no description available & (gnl|cdd|29191 : 103.0) no description available & (reliability: 684.0) & (original description: Putative TFCB, Description = Tubulin-folding cofactor B, PFAM = PF14560;PF01302)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'nbv0.3scaffold66651_1-6503' '(at3g57890 : 393.0) Tubulin binding cofactor C domain-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CARP motif (InterPro:IPR006599), C-CAP/cofactor C-like domain (InterPro:IPR017901), Tubulin binding cofactor C (InterPro:IPR012945); BEST Arabidopsis thaliana protein match is: C-CAP/cofactor C-like domain-containing protein (TAIR:AT2G42230.2). & (gnl|cdd|39617 : 261.0) no description available & (reliability: 786.0) & (original description: Putative TBCC, Description = TBCC domain-containing protein 1, PFAM = )' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'nbv0.5scaffold818_386886-463139' '(at3g10220 : 342.0) Encodes a tubulin-binding cofactor. Homozygous mutant plants are embryo lethal. Heterozygous mutant plants showed increased ploidy and higher numbers of spindles and phragmoplasts, suggesting a role in cell division.; tubulin folding cofactor B; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: tubulin complex assembly, embryo development, cell division; LOCATED IN: nucleus, cytoplasm, phragmoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytoskeleton-associated protein, CAP-Gly (InterPro:IPR000938); Has 1750 Blast hits to 1417 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 1247; Fungi - 285; Plants - 70; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|38416 : 226.0) no description available & (gnl|cdd|29191 : 104.0) no description available & (reliability: 684.0) & (original description: Putative TFCB, Description = Tubulin-folding cofactor B, PFAM = PF14560;PF01302)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'nbv0.5scaffold1652_72406-77221' '(at5g06680 : 1072.0) Encodes protein similar to yeast SCP98. Yeast SCP98 is essential for the microtubule nucleation activity of the gamma-tubulin ring complexes.; spindle pole body component 98 (SPC98); CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259), Gamma tubulin complex protein 3 (InterPro:IPR015697); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT5G17410.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37211 : 622.0) no description available & (gnl|cdd|67734 : 439.0) no description available & (q9sc88|gcp4_medtr : 88.2) Gamma-tubulin complex component 4 homolog - Medicago truncatula (Barrel medic) & (reliability: 2144.0) & (original description: Putative GCP3, Description = Gamma-tubulin complex component 3, PFAM = PF04130)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'nbv0.5scaffold3136_71806-93029' '(at3g43610 : 404.0) Spc97 / Spc98 family of spindle pole body (SBP) component; FUNCTIONS IN: tubulin binding; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: chloroplast, spindle pole, microtubule organizing center; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: spindle pole body component 98 (TAIR:AT5G06680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67734 : 113.0) no description available & (gnl|cdd|37211 : 111.0) no description available & (reliability: 808.0) & (original description: Putative Sb06g025620, Description = Gamma-tubulin complex component, PFAM = PF04130)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'nbv0.5scaffold8100_12565-39518' '(at1g71440 : 639.0) Encodes tubulin-folding cofactor E. Mutant embryos consist of one or a few grossly enlarged cells, surrounded by an endosperm that fails to cellularize and contains a few big nuclei.; PFIFFERLING (PFI); INVOLVED IN: tubulin complex assembly, embryo development ending in seed dormancy, cytokinesis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytoskeleton-associated protein, CAP-Gly (InterPro:IPR000938); Has 7270 Blast hits to 6366 proteins in 489 species: Archae - 4; Bacteria - 1949; Metazoa - 3435; Fungi - 492; Plants - 819; Viruses - 0; Other Eukaryotes - 571 (source: NCBI BLink). & (gnl|cdd|38193 : 275.0) no description available & (gnl|cdd|85375 : 89.4) no description available & (reliability: 1278.0) & (original description: Putative TFCE, Description = Tubulin-folding cofactor E, PFAM = PF01302)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben044scf00003775ctg001_3338-8583' '(gnl|cdd|30217 : 906.0) no description available & (at5g19780 : 813.0) Encodes an isoform of alpha tubulin. Closely related to adjacent gene TUA3 suggesting recent duplication.; tubulin alpha-5 (TUA5); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: response to cadmium ion, microtubule-based process; LOCATED IN: tubulin complex, cytosol, cell wall, membrane; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-3 (TAIR:AT5G19770.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p33627|tba6_maize : 811.0) Tubulin alpha-6 chain (Alpha-6 tubulin) - Zea mays (Maize) & (gnl|cdd|36590 : 701.0) no description available & (reliability: 1626.0) & (original description: Putative ALTBN, Description = Tubulin alpha-1B chain, PFAM = PF00091;PF03953)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben044scf00006458ctg010_7730-12016' '(gnl|cdd|30217 : 928.0) no description available & (q9zrr5|tba3_horvu : 863.0) Tubulin alpha-3 chain - Hordeum vulgare (Barley) & (at4g14960 : 861.0) Encodes an alpha-tubulin isoform required for right handed helical growth.; TUA6; FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: response to salt stress, microtubule cytoskeleton organization, cellular response to gravity; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-2 chain (TAIR:AT1G50010.1); Has 22664 Blast hits to 22566 proteins in 4681 species: Archae - 4; Bacteria - 25; Metazoa - 4398; Fungi - 13427; Plants - 1532; Viruses - 0; Other Eukaryotes - 3278 (source: NCBI BLink). & (gnl|cdd|36590 : 724.0) no description available & (reliability: 1722.0) & (original description: Putative TUBA1, Description = Tubulin alpha-1 chain, PFAM = PF03953;PF00091)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben044scf00013449ctg000_1704-10316' '(at1g71440 : 404.0) Encodes tubulin-folding cofactor E. Mutant embryos consist of one or a few grossly enlarged cells, surrounded by an endosperm that fails to cellularize and contains a few big nuclei.; PFIFFERLING (PFI); INVOLVED IN: tubulin complex assembly, embryo development ending in seed dormancy, cytokinesis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytoskeleton-associated protein, CAP-Gly (InterPro:IPR000938); Has 7270 Blast hits to 6366 proteins in 489 species: Archae - 4; Bacteria - 1949; Metazoa - 3435; Fungi - 492; Plants - 819; Viruses - 0; Other Eukaryotes - 571 (source: NCBI BLink). & (gnl|cdd|38193 : 232.0) no description available & (reliability: 808.0) & (original description: Putative PFI, Description = AtTFCE, PFAM = )' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben044scf00016857ctg008_4721-20209' '(at3g43610 : 620.0) Spc97 / Spc98 family of spindle pole body (SBP) component; FUNCTIONS IN: tubulin binding; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: chloroplast, spindle pole, microtubule organizing center; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: spindle pole body component 98 (TAIR:AT5G06680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37211 : 115.0) no description available & (gnl|cdd|67734 : 113.0) no description available & (reliability: 1240.0) & (original description: Putative BnaAnng37470D, Description = Gamma-tubulin complex component, PFAM = PF04130)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben044scf00016857ctg008_5770-13206' '(at3g43610 : 280.0) Spc97 / Spc98 family of spindle pole body (SBP) component; FUNCTIONS IN: tubulin binding; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: chloroplast, spindle pole, microtubule organizing center; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: spindle pole body component 98 (TAIR:AT5G06680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67734 : 112.0) no description available & (reliability: 560.0) & (original description: Putative SDM1_2t00015, Description = Gamma-tubulin complex component, PFAM = PF04130)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben044scf00017353ctg001_1-2170' '(at1g80260 : 224.0) embryo defective 1427 (emb1427); FUNCTIONS IN: tubulin binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: spindle pole, microtubule organizing center; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G20570.1); Has 1146 Blast hits to 1005 proteins in 166 species: Archae - 0; Bacteria - 0; Metazoa - 591; Fungi - 250; Plants - 182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative emb1427, Description = Gamma-tubulin complex component, PFAM = )' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben044scf00024466ctg005_1646-5023' '(at4g39920 : 296.0) Microtubule-folding cofactor, produces assembly-competent alpha-/beta-tubulin heterodimers.; PORCINO (POR); FUNCTIONS IN: binding; INVOLVED IN: tubulin complex assembly, cytokinesis; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CARP motif (InterPro:IPR006599), C-CAP/cofactor C-like domain (InterPro:IPR017901), Tubulin binding cofactor C (InterPro:IPR012945); Has 497 Blast hits to 493 proteins in 165 species: Archae - 0; Bacteria - 11; Metazoa - 222; Fungi - 88; Plants - 54; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|37723 : 203.0) no description available & (gnl|cdd|87422 : 144.0) no description available & (reliability: 592.0) & (original description: Putative TFCC, Description = Tubulin-folding cofactor C, PFAM = PF07986;PF16752)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben044scf00031457ctg001_1242-6359' '(at5g06680 : 1082.0) Encodes protein similar to yeast SCP98. Yeast SCP98 is essential for the microtubule nucleation activity of the gamma-tubulin ring complexes.; spindle pole body component 98 (SPC98); CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259), Gamma tubulin complex protein 3 (InterPro:IPR015697); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT5G17410.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37211 : 626.0) no description available & (gnl|cdd|67734 : 448.0) no description available & (q9sc88|gcp4_medtr : 87.4) Gamma-tubulin complex component 4 homolog - Medicago truncatula (Barrel medic) & (reliability: 2164.0) & (original description: Putative GCP3, Description = Gamma-tubulin complex component 3, PFAM = PF04130)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben044scf00041473ctg004_19-9008' '(at5g66410 : 243.0) Encodes a protein that functions in microtubule assembly. Plants with reduced levels of both PLP3a (At3g50960) and PLP3b show defects in cytokinesis, cortical microtubule array formation, oriented cell growth, and maintenance of proper ploidy.; phosducin-like protein 3 homolog (PLP3b); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: phosducin-like protein 3 homolog (TAIR:AT3G50960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36885 : 224.0) no description available & (gnl|cdd|48538 : 159.0) no description available & (reliability: 480.0) & (original description: Putative PLP3A, Description = Thioredoxin domain-containing protein PLP3A, PFAM = )' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf00150_57552-63151' '(gnl|cdd|30217 : 909.0) no description available & (at5g19780 : 818.0) Encodes an isoform of alpha tubulin. Closely related to adjacent gene TUA3 suggesting recent duplication.; tubulin alpha-5 (TUA5); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: response to cadmium ion, microtubule-based process; LOCATED IN: tubulin complex, cytosol, cell wall, membrane; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-3 (TAIR:AT5G19770.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p33627|tba6_maize : 815.0) Tubulin alpha-6 chain (Alpha-6 tubulin) - Zea mays (Maize) & (gnl|cdd|36590 : 705.0) no description available & (reliability: 1636.0) & (original description: Putative TUBA1, Description = Tubulin alpha-1 chain, PFAM = PF03953;PF00091)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf00626_243720-248429' '(gnl|cdd|30218 : 895.0) no description available & (at5g23860 : 875.0) beta-tubulin, preferentially expressed in endodermal and phloem cells of primary roots and in the vascular tissues of leaves, stems, and flowers.; tubulin beta 8 (TUB8); CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin beta chain 3 (TAIR:AT5G62700.1). & (q8h7u1|tbb2_orysa : 872.0) Tubulin beta-2 chain (Beta-2 tubulin) - Oryza sativa (Rice) & (gnl|cdd|36589 : 567.0) no description available & (reliability: 1750.0) & (original description: Putative TUBB4, Description = Tubulin beta-4 chain, PFAM = PF00091;PF03953)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf00783_485086-488208' '(at4g39920 : 178.0) Microtubule-folding cofactor, produces assembly-competent alpha-/beta-tubulin heterodimers.; PORCINO (POR); FUNCTIONS IN: binding; INVOLVED IN: tubulin complex assembly, cytokinesis; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CARP motif (InterPro:IPR006599), C-CAP/cofactor C-like domain (InterPro:IPR017901), Tubulin binding cofactor C (InterPro:IPR012945); Has 497 Blast hits to 493 proteins in 165 species: Archae - 0; Bacteria - 11; Metazoa - 222; Fungi - 88; Plants - 54; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|87422 : 135.0) no description available & (gnl|cdd|37723 : 124.0) no description available & (reliability: 356.0) & (original description: Putative POR, Description = Tubulin-specific chaperone C, PFAM = PF07986)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf00783_485703-488788' '(at4g39920 : 268.0) Microtubule-folding cofactor, produces assembly-competent alpha-/beta-tubulin heterodimers.; PORCINO (POR); FUNCTIONS IN: binding; INVOLVED IN: tubulin complex assembly, cytokinesis; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CARP motif (InterPro:IPR006599), C-CAP/cofactor C-like domain (InterPro:IPR017901), Tubulin binding cofactor C (InterPro:IPR012945); Has 497 Blast hits to 493 proteins in 165 species: Archae - 0; Bacteria - 11; Metazoa - 222; Fungi - 88; Plants - 54; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|37723 : 201.0) no description available & (gnl|cdd|87422 : 143.0) no description available & (reliability: 536.0) & (original description: Putative TFCC, Description = Tubulin-folding cofactor C, PFAM = PF16752;PF07986)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf00998_54233-62984' '(at3g57890 : 800.0) Tubulin binding cofactor C domain-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CARP motif (InterPro:IPR006599), C-CAP/cofactor C-like domain (InterPro:IPR017901), Tubulin binding cofactor C (InterPro:IPR012945); BEST Arabidopsis thaliana protein match is: C-CAP/cofactor C-like domain-containing protein (TAIR:AT2G42230.2). & (gnl|cdd|39617 : 560.0) no description available & (gnl|cdd|87422 : 146.0) no description available & (reliability: 1600.0) & (original description: Putative TBCC, Description = Tublin binding cofactor C, PFAM = PF07986)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf01115_50914-68653' '(at3g53760 : 913.0) Encodes GCP4 (gamma-Tubulin Complex Protein 4), required for microtubule organization.; GAMMA-TUBULIN COMPLEX PROTEIN 4 (GCP4); CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: spindle pole body component 98 (TAIR:AT5G06680.1); Has 1249 Blast hits to 1181 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 551; Fungi - 320; Plants - 155; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (q9sc88|gcp4_medtr : 906.0) Gamma-tubulin complex component 4 homolog - Medicago truncatula (Barrel medic) & (gnl|cdd|37276 : 672.0) no description available & (gnl|cdd|67734 : 336.0) no description available & (reliability: 1826.0) & (original description: Putative GCP4, Description = Gamma-tubulin complex component 4, PFAM = PF04130)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf01319_407060-411424' '(gnl|cdd|30218 : 889.0) no description available & (p46264|tbb2_soltu : 858.0) Tubulin beta-2 chain (Beta-2 tubulin) - Solanum tuberosum (Potato) & (at1g75780 : 841.0) beta tubulin gene downregulated by phytochrome A (phyA)-mediated far-red light high-irradiance and the phytochrome B (phyB)-mediated red light high-irradiance responses; tubulin beta-1 chain (TUB1); FUNCTIONS IN: structural molecule activity, GTP binding, GTPase activity; INVOLVED IN: response to light stimulus, unidimensional cell growth; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin beta-5 chain (TAIR:AT1G20010.1); Has 23671 Blast hits to 23575 proteins in 4891 species: Archae - 36; Bacteria - 42; Metazoa - 4470; Fungi - 14216; Plants - 1549; Viruses - 0; Other Eukaryotes - 3358 (source: NCBI BLink). & (gnl|cdd|36589 : 566.0) no description available & (reliability: 1682.0) & (original description: Putative BETA, Description = Tubulin beta-1 chain, PFAM = PF00091;PF03953)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf01326_532307-536172' '(gnl|cdd|30217 : 926.0) no description available & (q9zrr5|tba3_horvu : 861.0) Tubulin alpha-3 chain - Hordeum vulgare (Barley) & (at4g14960 : 855.0) Encodes an alpha-tubulin isoform required for right handed helical growth.; TUA6; FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: response to salt stress, microtubule cytoskeleton organization, cellular response to gravity; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-2 chain (TAIR:AT1G50010.1); Has 22664 Blast hits to 22566 proteins in 4681 species: Archae - 4; Bacteria - 25; Metazoa - 4398; Fungi - 13427; Plants - 1532; Viruses - 0; Other Eukaryotes - 3278 (source: NCBI BLink). & (gnl|cdd|36590 : 721.0) no description available & (reliability: 1710.0) & (original description: Putative TUBA1, Description = Tubulin alpha-1 chain, PFAM = PF00091;PF03953)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf01445_28621-36352' '(at1g77550 : 1102.0) tubulin-tyrosine ligases;tubulin-tyrosine ligases; FUNCTIONS IN: tubulin-tyrosine ligase activity; INVOLVED IN: protein modification process; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Tubulin-tyrosine ligase (InterPro:IPR004344); Has 1977 Blast hits to 1869 proteins in 143 species: Archae - 0; Bacteria - 8; Metazoa - 1192; Fungi - 29; Plants - 92; Viruses - 0; Other Eukaryotes - 656 (source: NCBI BLink). & (gnl|cdd|37366 : 593.0) no description available & (gnl|cdd|86249 : 187.0) no description available & (reliability: 2204.0) & (original description: Putative At1g77550, Description = At1g77550, PFAM = PF03133)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf01746_368455-371498' '(at4g39920 : 292.0) Microtubule-folding cofactor, produces assembly-competent alpha-/beta-tubulin heterodimers.; PORCINO (POR); FUNCTIONS IN: binding; INVOLVED IN: tubulin complex assembly, cytokinesis; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CARP motif (InterPro:IPR006599), C-CAP/cofactor C-like domain (InterPro:IPR017901), Tubulin binding cofactor C (InterPro:IPR012945); Has 497 Blast hits to 493 proteins in 165 species: Archae - 0; Bacteria - 11; Metazoa - 222; Fungi - 88; Plants - 54; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|37723 : 202.0) no description available & (gnl|cdd|87422 : 140.0) no description available & (reliability: 584.0) & (original description: Putative TFCC, Description = Tubulin-folding cofactor C, PFAM = PF07986;PF16752)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf01797_109061-113541' '(gnl|cdd|30217 : 927.0) no description available & (q9zrr5|tba3_horvu : 868.0) Tubulin alpha-3 chain - Hordeum vulgare (Barley) & (at4g14960 : 865.0) Encodes an alpha-tubulin isoform required for right handed helical growth.; TUA6; FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: response to salt stress, microtubule cytoskeleton organization, cellular response to gravity; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-2 chain (TAIR:AT1G50010.1); Has 22664 Blast hits to 22566 proteins in 4681 species: Archae - 4; Bacteria - 25; Metazoa - 4398; Fungi - 13427; Plants - 1532; Viruses - 0; Other Eukaryotes - 3278 (source: NCBI BLink). & (gnl|cdd|36590 : 724.0) no description available & (reliability: 1730.0) & (original description: Putative TUBA1, Description = Tubulin alpha-1 chain, PFAM = PF03953;PF00091)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf02108_111216-127267' '(at3g10220 : 350.0) Encodes a tubulin-binding cofactor. Homozygous mutant plants are embryo lethal. Heterozygous mutant plants showed increased ploidy and higher numbers of spindles and phragmoplasts, suggesting a role in cell division.; tubulin folding cofactor B; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: tubulin complex assembly, embryo development, cell division; LOCATED IN: nucleus, cytoplasm, phragmoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytoskeleton-associated protein, CAP-Gly (InterPro:IPR000938); Has 1750 Blast hits to 1417 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 1247; Fungi - 285; Plants - 70; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|38416 : 246.0) no description available & (gnl|cdd|29191 : 106.0) no description available & (reliability: 700.0) & (original description: Putative TFCB, Description = Tubulin-folding cofactor B, PFAM = PF01302;PF14560)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf02108_111462-127084' '(at3g10220 : 349.0) Encodes a tubulin-binding cofactor. Homozygous mutant plants are embryo lethal. Heterozygous mutant plants showed increased ploidy and higher numbers of spindles and phragmoplasts, suggesting a role in cell division.; tubulin folding cofactor B; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: tubulin complex assembly, embryo development, cell division; LOCATED IN: nucleus, cytoplasm, phragmoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytoskeleton-associated protein, CAP-Gly (InterPro:IPR000938); Has 1750 Blast hits to 1417 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 1247; Fungi - 285; Plants - 70; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|38416 : 237.0) no description available & (gnl|cdd|29191 : 106.0) no description available & (reliability: 698.0) & (original description: Putative TFCB, Description = Tubulin-folding cofactor B, PFAM = PF14560;PF01302)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf02182_1418905-1446465' '(at1g71440 : 634.0) Encodes tubulin-folding cofactor E. Mutant embryos consist of one or a few grossly enlarged cells, surrounded by an endosperm that fails to cellularize and contains a few big nuclei.; PFIFFERLING (PFI); INVOLVED IN: tubulin complex assembly, embryo development ending in seed dormancy, cytokinesis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytoskeleton-associated protein, CAP-Gly (InterPro:IPR000938); Has 7270 Blast hits to 6366 proteins in 489 species: Archae - 4; Bacteria - 1949; Metazoa - 3435; Fungi - 492; Plants - 819; Viruses - 0; Other Eukaryotes - 571 (source: NCBI BLink). & (gnl|cdd|38193 : 277.0) no description available & (gnl|cdd|85375 : 91.8) no description available & (reliability: 1268.0) & (original description: Putative PFI, Description = AtTFCE, PFAM = PF01302)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf03243_52667-58162' '(gnl|cdd|30217 : 913.0) no description available & (q96460|tba2_horvu : 850.0) Tubulin alpha-2 chain - Hordeum vulgare (Barley) & (at1g50010 : 848.0) Encodes alpha-2,4 tubulin. TUA2 and TUA4 encode identical proteins.; tubulin alpha-2 chain (TUA2); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: microtubule-based process, response to salt stress; LOCATED IN: tubulin complex, cytosol, cell wall, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-4 chain (TAIR:AT1G04820.1); Has 22626 Blast hits to 22529 proteins in 4679 species: Archae - 4; Bacteria - 25; Metazoa - 4391; Fungi - 13400; Plants - 1532; Viruses - 0; Other Eukaryotes - 3274 (source: NCBI BLink). & (gnl|cdd|36590 : 705.0) no description available & (reliability: 1696.0) & (original description: Putative TUBA1, Description = Tubulin alpha-1 chain, PFAM = PF03953;PF00091)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf03251_13575-18399' '(gnl|cdd|30217 : 927.0) no description available & (q9zrr5|tba3_horvu : 865.0) Tubulin alpha-3 chain - Hordeum vulgare (Barley) & (at4g14960 : 858.0) Encodes an alpha-tubulin isoform required for right handed helical growth.; TUA6; FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: response to salt stress, microtubule cytoskeleton organization, cellular response to gravity; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-2 chain (TAIR:AT1G50010.1); Has 22664 Blast hits to 22566 proteins in 4681 species: Archae - 4; Bacteria - 25; Metazoa - 4398; Fungi - 13427; Plants - 1532; Viruses - 0; Other Eukaryotes - 3278 (source: NCBI BLink). & (gnl|cdd|36590 : 722.0) no description available & (reliability: 1716.0) & (original description: Putative TUBA1, Description = Tubulin alpha-1 chain, PFAM = PF00091;PF03953)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf03275_1474-12501' '(gnl|cdd|30217 : 207.0) no description available & (gnl|cdd|36590 : 178.0) no description available & (at5g19780 : 168.0) Encodes an isoform of alpha tubulin. Closely related to adjacent gene TUA3 suggesting recent duplication.; tubulin alpha-5 (TUA5); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: response to cadmium ion, microtubule-based process; LOCATED IN: tubulin complex, cytosol, cell wall, membrane; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-3 (TAIR:AT5G19770.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p28752|tba1_orysa : 167.0) Tubulin alpha-1 chain - Oryza sativa (Rice) & (reliability: 336.0) & (original description: Putative anf1, Description = Alpha-tubulin, PFAM = PF00091)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf03329_175808-180086' '(gnl|cdd|30218 : 894.0) no description available & (q8h7u1|tbb2_orysa : 868.0) Tubulin beta-2 chain (Beta-2 tubulin) - Oryza sativa (Rice) & (at5g23860 : 864.0) beta-tubulin, preferentially expressed in endodermal and phloem cells of primary roots and in the vascular tissues of leaves, stems, and flowers.; tubulin beta 8 (TUB8); CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin beta chain 3 (TAIR:AT5G62700.1). & (gnl|cdd|36589 : 569.0) no description available & (reliability: 1728.0) & (original description: Putative benA, Description = Beta-tubulin, PFAM = PF00091;PF03953)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf03494_1021993-1041263' '(at3g57890 : 788.0) Tubulin binding cofactor C domain-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CARP motif (InterPro:IPR006599), C-CAP/cofactor C-like domain (InterPro:IPR017901), Tubulin binding cofactor C (InterPro:IPR012945); BEST Arabidopsis thaliana protein match is: C-CAP/cofactor C-like domain-containing protein (TAIR:AT2G42230.2). & (gnl|cdd|39617 : 553.0) no description available & (gnl|cdd|87422 : 145.0) no description available & (reliability: 1576.0) & (original description: Putative TBCC, Description = Tublin binding cofactor C, PFAM = PF07986)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf05048_75070-78740' '(gnl|cdd|30218 : 896.0) no description available & (q8h7u1|tbb2_orysa : 877.0) Tubulin beta-2 chain (Beta-2 tubulin) - Oryza sativa (Rice) & (at5g23860 : 872.0) beta-tubulin, preferentially expressed in endodermal and phloem cells of primary roots and in the vascular tissues of leaves, stems, and flowers.; tubulin beta 8 (TUB8); CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin beta chain 3 (TAIR:AT5G62700.1). & (gnl|cdd|36589 : 570.0) no description available & (reliability: 1744.0) & (original description: Putative TUBB7, Description = Tubulin beta-7 chain, PFAM = PF03953;PF00091)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf05363_453376-464563' '(at1g80260 : 940.0) embryo defective 1427 (emb1427); FUNCTIONS IN: tubulin binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: spindle pole, microtubule organizing center; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G20570.1); Has 1146 Blast hits to 1005 proteins in 166 species: Archae - 0; Bacteria - 0; Metazoa - 591; Fungi - 250; Plants - 182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|37276 : 104.0) no description available & (gnl|cdd|67734 : 96.5) no description available & (reliability: 1880.0) & (original description: Putative emb1427, Description = Gamma-tubulin complex component, PFAM = PF04130)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf05811_191005-196171' '(gnl|cdd|30218 : 894.0) no description available & (at5g23860 : 864.0) beta-tubulin, preferentially expressed in endodermal and phloem cells of primary roots and in the vascular tissues of leaves, stems, and flowers.; tubulin beta 8 (TUB8); CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin beta chain 3 (TAIR:AT5G62700.1). & (q8h7u1|tbb2_orysa : 862.0) Tubulin beta-2 chain (Beta-2 tubulin) - Oryza sativa (Rice) & (gnl|cdd|36589 : 567.0) no description available & (reliability: 1728.0) & (original description: Putative benA, Description = Beta-tubulin, PFAM = PF03953;PF00091)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf06831_93734-98232' '(gnl|cdd|30218 : 895.0) no description available & (q43594|tbb1_orysa : 880.0) Tubulin beta-1 chain (Beta-1 tubulin) - Oryza sativa (Rice) & (at5g12250 : 872.0) Encodes a beta-tubulin. Expression of TUB6 has been shown to decrease in response to cold treatment.; beta-6 tubulin (TUB6); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: microtubule-based process, response to salt stress, response to cold; LOCATED IN: microtubule cytoskeleton, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin beta chain 3 (TAIR:AT5G62700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36589 : 565.0) no description available & (reliability: 1744.0) & (original description: Putative TUBB4, Description = Tubulin beta-4 chain, PFAM = PF03953;PF00091)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf06898_12041-16650' '(gnl|cdd|30218 : 899.0) no description available & (p46265|tbb5_orysa : 862.0) Tubulin beta-5 chain (Beta-5 tubulin) - Oryza sativa (Rice) & (at5g12250 : 847.0) Encodes a beta-tubulin. Expression of TUB6 has been shown to decrease in response to cold treatment.; beta-6 tubulin (TUB6); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: microtubule-based process, response to salt stress, response to cold; LOCATED IN: microtubule cytoskeleton, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin beta chain 3 (TAIR:AT5G62700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36589 : 570.0) no description available & (reliability: 1694.0) & (original description: Putative TUBB4, Description = Tubulin beta-4 chain, PFAM = PF00091;PF03953)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf08030_36014-61476' '(at3g43610 : 360.0) Spc97 / Spc98 family of spindle pole body (SBP) component; FUNCTIONS IN: tubulin binding; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: chloroplast, spindle pole, microtubule organizing center; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: spindle pole body component 98 (TAIR:AT5G06680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67734 : 113.0) no description available & (gnl|cdd|37211 : 111.0) no description available & (reliability: 720.0) & (original description: Putative Os04g0566800, Description = Gamma-tubulin complex component, PFAM = PF04130)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf08137_612729-619917' '(at3g10220 : 302.0) Encodes a tubulin-binding cofactor. Homozygous mutant plants are embryo lethal. Heterozygous mutant plants showed increased ploidy and higher numbers of spindles and phragmoplasts, suggesting a role in cell division.; tubulin folding cofactor B; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: tubulin complex assembly, embryo development, cell division; LOCATED IN: nucleus, cytoplasm, phragmoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytoskeleton-associated protein, CAP-Gly (InterPro:IPR000938); Has 1750 Blast hits to 1417 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 1247; Fungi - 285; Plants - 70; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|38416 : 183.0) no description available & (gnl|cdd|29191 : 103.0) no description available & (reliability: 604.0) & (original description: Putative TFCB, Description = Tubulin-folding cofactor B, PFAM = PF14560;PF01302)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf08415_48865-53598' '(gnl|cdd|30218 : 892.0) no description available & (at5g23860 : 853.0) beta-tubulin, preferentially expressed in endodermal and phloem cells of primary roots and in the vascular tissues of leaves, stems, and flowers.; tubulin beta 8 (TUB8); CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin beta chain 3 (TAIR:AT5G62700.1). & (q8h7u1|tbb2_orysa : 847.0) Tubulin beta-2 chain (Beta-2 tubulin) - Oryza sativa (Rice) & (gnl|cdd|36589 : 562.0) no description available & (reliability: 1706.0) & (original description: Putative tubB, Description = Tubulin beta chain, nucleomorph, PFAM = PF00091;PF03953)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf08580_5678-11520' '(at5g66410 : 259.0) Encodes a protein that functions in microtubule assembly. Plants with reduced levels of both PLP3a (At3g50960) and PLP3b show defects in cytokinesis, cortical microtubule array formation, oriented cell growth, and maintenance of proper ploidy.; phosducin-like protein 3 homolog (PLP3b); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: phosducin-like protein 3 homolog (TAIR:AT3G50960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36885 : 235.0) no description available & (gnl|cdd|48538 : 170.0) no description available & (reliability: 516.0) & (original description: Putative phlp3, Description = Phosducin-like protein 3, PFAM = PF00085)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf08653_653291-657549' '(gnl|cdd|30218 : 881.0) no description available & (q9zrb0|tbb3_wheat : 838.0) Tubulin beta-3 chain (Beta-3 tubulin) - Triticum aestivum (Wheat) & (at5g12250 : 837.0) Encodes a beta-tubulin. Expression of TUB6 has been shown to decrease in response to cold treatment.; beta-6 tubulin (TUB6); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: microtubule-based process, response to salt stress, response to cold; LOCATED IN: microtubule cytoskeleton, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin beta chain 3 (TAIR:AT5G62700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36589 : 550.0) no description available & (reliability: 1674.0) & (original description: Putative benA, Description = Beta-tubulin, PFAM = PF03953;PF00091)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf09025_244209-255876' '(at3g61650 : 938.0) Required for centrosomal and noncentrosomal microtubule nucleation. Involved in specification of cell identity, such as stomatal patterning. Constitutively expressed throughout plant.; gamma-tubulin (TUBG1); FUNCTIONS IN: structural molecule activity, GTP binding, GTPase activity; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, microtubule, plasma membrane, cytoplasm; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Gamma tubulin (InterPro:IPR002454), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: gamma-tubulin complex protein 2 (TAIR:AT5G05620.1); Has 22646 Blast hits to 22602 proteins in 4766 species: Archae - 19; Bacteria - 43; Metazoa - 4166; Fungi - 13770; Plants - 1412; Viruses - 0; Other Eukaryotes - 3236 (source: NCBI BLink). & (q9xfg3|tbg_phypa : 903.0) Tubulin gamma chain (Gamma tubulin) - Physcomitrella patens (Moss) & (gnl|cdd|30219 : 779.0) no description available & (gnl|cdd|36588 : 742.0) no description available & (reliability: 1876.0) & (original description: Putative TUBG1, Description = Tubulin gamma-1 chain, PFAM = PF03953;PF00091)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf11361_246477-265690' '(at3g60740 : 1493.0) Encodes tubulin-folding cofactor D. Mutants arrest during embryogenesis with embryos that are small, mushroom-shaped ('pilz') and consist of only one or few large cells each containing one or more variably enlarged nuclei and often cell wall stubs. Gene product necessary for continuous microtubule organization.; TITAN 1 (TTN1); CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37154 : 929.0) no description available & (gnl|cdd|34831 : 106.0) no description available & (reliability: 2986.0) & (original description: Putative TFCD, Description = Tubulin-folding cofactor D, PFAM = PF12612)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf13103_226779-232096' '(at5g66410 : 288.0) Encodes a protein that functions in microtubule assembly. Plants with reduced levels of both PLP3a (At3g50960) and PLP3b show defects in cytokinesis, cortical microtubule array formation, oriented cell growth, and maintenance of proper ploidy.; phosducin-like protein 3 homolog (PLP3b); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: phosducin-like protein 3 homolog (TAIR:AT3G50960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36885 : 235.0) no description available & (gnl|cdd|48538 : 172.0) no description available & (reliability: 572.0) & (original description: Putative PLP3A, Description = Thioredoxin domain-containing protein PLP3A, PFAM = PF00085)' T '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'niben101scf13577_112826-117501' '(gnl|cdd|30217 : 916.0) no description available & (q9zrr5|tba3_horvu : 861.0) Tubulin alpha-3 chain - Hordeum vulgare (Barley) & (at4g14960 : 855.0) Encodes an alpha-tubulin isoform required for right handed helical growth.; TUA6; FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: response to salt stress, microtubule cytoskeleton organization, cellular response to gravity; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-2 chain (TAIR:AT1G50010.1); Has 22664 Blast hits to 22566 proteins in 4681 species: Archae - 4; Bacteria - 25; Metazoa - 4398; Fungi - 13427; Plants - 1532; Viruses - 0; Other Eukaryotes - 3278 (source: NCBI BLink). & (gnl|cdd|36590 : 712.0) no description available & (reliability: 1710.0) & (original description: Putative TUBA1, Description = Tubulin alpha-1 chain, PFAM = PF03953;PF00091)' T '31.1.1.2.5' 'cell.organisation.cytoskeleton.mikrotubuli.MAP70' 'nbv0.3scaffold2976_12838-15344' '(at1g14840 : 100.0) Encodes a microtubule associated protein (MAP70-4). Expressed in all tissues.; microtubule-associated proteins 70-4 (MAP70-4); FUNCTIONS IN: microtubule binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: microtubule; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Myosin II heavy chain-like (InterPro:IPR009768); BEST Arabidopsis thaliana protein match is: microtubule-associated proteins 70-3 (TAIR:AT2G01750.1). & (reliability: 200.0) & (original description: Putative At1g14840, Description = Microtubule-associated protein 70-1, PFAM = PF07058)' T '31.1.1.2.5' 'cell.organisation.cytoskeleton.mikrotubuli.MAP70' 'nbv0.3scaffold70287_1-7228' '(at4g17220 : 367.0) Encodes a microtubule associated protein (MAP70-5). Regulates secondary wall patterning in wood cells. Expressed in all tissues.; microtubule-associated proteins 70-5 (MAP70-5); CONTAINS InterPro DOMAIN/s: Myosin II heavy chain-like (InterPro:IPR009768); BEST Arabidopsis thaliana protein match is: microtubule-associated proteins 70-2 (TAIR:AT1G24764.1); Has 55887 Blast hits to 31940 proteins in 2062 species: Archae - 816; Bacteria - 7000; Metazoa - 28657; Fungi - 4455; Plants - 2969; Viruses - 117; Other Eukaryotes - 11873 (source: NCBI BLink). & (gnl|cdd|70519 : 289.0) no description available & (reliability: 734.0) & (original description: Putative dl4645c, Description = Microtubule-associated protein 70-1, PFAM = PF07058)' T '31.1.1.2.5' 'cell.organisation.cytoskeleton.mikrotubuli.MAP70' 'niben044scf00013970ctg002_5337-11228' '(at4g17220 : 322.0) Encodes a microtubule associated protein (MAP70-5). Regulates secondary wall patterning in wood cells. Expressed in all tissues.; microtubule-associated proteins 70-5 (MAP70-5); CONTAINS InterPro DOMAIN/s: Myosin II heavy chain-like (InterPro:IPR009768); BEST Arabidopsis thaliana protein match is: microtubule-associated proteins 70-2 (TAIR:AT1G24764.1); Has 55887 Blast hits to 31940 proteins in 2062 species: Archae - 816; Bacteria - 7000; Metazoa - 28657; Fungi - 4455; Plants - 2969; Viruses - 117; Other Eukaryotes - 11873 (source: NCBI BLink). & (gnl|cdd|70519 : 279.0) no description available & (reliability: 644.0) & (original description: Putative dl4645c, Description = Microtubule-associated protein 70-1, PFAM = PF07058)' T '31.1.1.2.5' 'cell.organisation.cytoskeleton.mikrotubuli.MAP70' 'niben044scf00018438ctg005_890-6935' '(at4g17220 : 322.0) Encodes a microtubule associated protein (MAP70-5). Regulates secondary wall patterning in wood cells. Expressed in all tissues.; microtubule-associated proteins 70-5 (MAP70-5); CONTAINS InterPro DOMAIN/s: Myosin II heavy chain-like (InterPro:IPR009768); BEST Arabidopsis thaliana protein match is: microtubule-associated proteins 70-2 (TAIR:AT1G24764.1); Has 55887 Blast hits to 31940 proteins in 2062 species: Archae - 816; Bacteria - 7000; Metazoa - 28657; Fungi - 4455; Plants - 2969; Viruses - 117; Other Eukaryotes - 11873 (source: NCBI BLink). & (gnl|cdd|70519 : 258.0) no description available & (reliability: 644.0) & (original description: Putative dl4645c, Description = Microtubule-associated protein 70-1, PFAM = PF07058)' T '31.1.1.2.5' 'cell.organisation.cytoskeleton.mikrotubuli.MAP70' 'niben044scf00022584ctg002_6865-12691' '(at1g24764 : 571.0) Member of the MAP70 protein family.; microtubule-associated proteins 70-2 (MAP70-2); FUNCTIONS IN: microtubule binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: microtubule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Myosin II heavy chain-like (InterPro:IPR009768); BEST Arabidopsis thaliana protein match is: microtubule-associated proteins 70-1 (TAIR:AT1G68060.1); Has 48419 Blast hits to 29383 proteins in 2175 species: Archae - 681; Bacteria - 6937; Metazoa - 23825; Fungi - 4071; Plants - 3202; Viruses - 118; Other Eukaryotes - 9585 (source: NCBI BLink). & (gnl|cdd|70519 : 395.0) no description available & (reliability: 1142.0) & (original description: Putative dl4645c, Description = Microtubule-associated protein 70-1, PFAM = PF07058)' T '31.1.1.2.5' 'cell.organisation.cytoskeleton.mikrotubuli.MAP70' 'niben101scf00326_70590-76708' '(at4g17220 : 331.0) Encodes a microtubule associated protein (MAP70-5). Regulates secondary wall patterning in wood cells. Expressed in all tissues.; microtubule-associated proteins 70-5 (MAP70-5); CONTAINS InterPro DOMAIN/s: Myosin II heavy chain-like (InterPro:IPR009768); BEST Arabidopsis thaliana protein match is: microtubule-associated proteins 70-2 (TAIR:AT1G24764.1); Has 55887 Blast hits to 31940 proteins in 2062 species: Archae - 816; Bacteria - 7000; Metazoa - 28657; Fungi - 4455; Plants - 2969; Viruses - 117; Other Eukaryotes - 11873 (source: NCBI BLink). & (gnl|cdd|70519 : 273.0) no description available & (reliability: 662.0) & (original description: Putative dl4645c, Description = Microtubule-associated protein 70-1, PFAM = PF07058)' T '31.1.1.2.5' 'cell.organisation.cytoskeleton.mikrotubuli.MAP70' 'niben101scf03621_160897-169014' '(at1g68060 : 592.0) Encodes a microtubule associated protein (MAP70-1). Expressed in all tissues.; microtubule-associated proteins 70-1 (MAP70-1); FUNCTIONS IN: microtubule binding; INVOLVED IN: xylem and phloem pattern formation, plant-type cell wall biogenesis, cytoskeleton organization; LOCATED IN: cortical microtubule, transverse to long axis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Myosin II heavy chain-like (InterPro:IPR009768); BEST Arabidopsis thaliana protein match is: microtubule-associated proteins 70-2 (TAIR:AT1G24764.1); Has 34541 Blast hits to 21193 proteins in 1686 species: Archae - 525; Bacteria - 3695; Metazoa - 18460; Fungi - 3012; Plants - 2282; Viruses - 76; Other Eukaryotes - 6491 (source: NCBI BLink). & (gnl|cdd|70519 : 404.0) no description available & (reliability: 1184.0) & (original description: Putative BnaC03g50980D, Description = BnaC03g50980D protein, PFAM = PF07058)' T '31.1.1.2.5' 'cell.organisation.cytoskeleton.mikrotubuli.MAP70' 'niben101scf04568_142233-149446' '(at1g24764 : 570.0) Member of the MAP70 protein family.; microtubule-associated proteins 70-2 (MAP70-2); FUNCTIONS IN: microtubule binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: microtubule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Myosin II heavy chain-like (InterPro:IPR009768); BEST Arabidopsis thaliana protein match is: microtubule-associated proteins 70-1 (TAIR:AT1G68060.1); Has 48419 Blast hits to 29383 proteins in 2175 species: Archae - 681; Bacteria - 6937; Metazoa - 23825; Fungi - 4071; Plants - 3202; Viruses - 118; Other Eukaryotes - 9585 (source: NCBI BLink). & (gnl|cdd|70519 : 399.0) no description available & (reliability: 1140.0) & (original description: Putative dl4645c, Description = Microtubule-associated protein 70-1, PFAM = PF07058)' T '31.1.1.2.5' 'cell.organisation.cytoskeleton.mikrotubuli.MAP70' 'niben101scf04796_129945-146138' '(at4g17220 : 340.0) Encodes a microtubule associated protein (MAP70-5). Regulates secondary wall patterning in wood cells. Expressed in all tissues.; microtubule-associated proteins 70-5 (MAP70-5); CONTAINS InterPro DOMAIN/s: Myosin II heavy chain-like (InterPro:IPR009768); BEST Arabidopsis thaliana protein match is: microtubule-associated proteins 70-2 (TAIR:AT1G24764.1); Has 55887 Blast hits to 31940 proteins in 2062 species: Archae - 816; Bacteria - 7000; Metazoa - 28657; Fungi - 4455; Plants - 2969; Viruses - 117; Other Eukaryotes - 11873 (source: NCBI BLink). & (gnl|cdd|70519 : 285.0) no description available & (reliability: 680.0) & (original description: Putative dl4645c, Description = Microtubule-associated protein 70-1, PFAM = PF07058)' T '31.1.1.2.5' 'cell.organisation.cytoskeleton.mikrotubuli.MAP70' 'niben101scf05302_459761-470024' '(at1g68060 : 594.0) Encodes a microtubule associated protein (MAP70-1). Expressed in all tissues.; microtubule-associated proteins 70-1 (MAP70-1); FUNCTIONS IN: microtubule binding; INVOLVED IN: xylem and phloem pattern formation, plant-type cell wall biogenesis, cytoskeleton organization; LOCATED IN: cortical microtubule, transverse to long axis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Myosin II heavy chain-like (InterPro:IPR009768); BEST Arabidopsis thaliana protein match is: microtubule-associated proteins 70-2 (TAIR:AT1G24764.1); Has 34541 Blast hits to 21193 proteins in 1686 species: Archae - 525; Bacteria - 3695; Metazoa - 18460; Fungi - 3012; Plants - 2282; Viruses - 76; Other Eukaryotes - 6491 (source: NCBI BLink). & (gnl|cdd|70519 : 397.0) no description available & (reliability: 1188.0) & (original description: Putative dl4645c, Description = Microtubule-associated protein 70-1, PFAM = PF07058)' T '31.1.1.2.5' 'cell.organisation.cytoskeleton.mikrotubuli.MAP70' 'niben101scf08368_144323-147345' '(at1g24764 : 249.0) Member of the MAP70 protein family.; microtubule-associated proteins 70-2 (MAP70-2); FUNCTIONS IN: microtubule binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: microtubule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Myosin II heavy chain-like (InterPro:IPR009768); BEST Arabidopsis thaliana protein match is: microtubule-associated proteins 70-1 (TAIR:AT1G68060.1); Has 48419 Blast hits to 29383 proteins in 2175 species: Archae - 681; Bacteria - 6937; Metazoa - 23825; Fungi - 4071; Plants - 3202; Viruses - 118; Other Eukaryotes - 9585 (source: NCBI BLink). & (gnl|cdd|70519 : 229.0) no description available & (reliability: 498.0) & (original description: Putative PGSC0003DMG401014948, Description = Microtubule-associated protein 70-1, PFAM = PF07058)' T '31.1.1.2.6' 'cell.organisation.cytoskeleton.mikrotubuli.MAP65' 'nbv0.3scaffold82516_567-6238' '(at5g51600 : 659.0) Mutant has defective roots. Essential for giant cell ontogenesis. Role in organizing the mitotic microtubule array during both early and late mitosis in all plant organs.; PLEIADE (PLE); CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-4 (TAIR:AT3G60840.1); Has 4514 Blast hits to 3795 proteins in 427 species: Archae - 120; Bacteria - 292; Metazoa - 2464; Fungi - 290; Plants - 515; Viruses - 1; Other Eukaryotes - 832 (source: NCBI BLink). & (gnl|cdd|39503 : 496.0) no description available & (gnl|cdd|67608 : 224.0) no description available & (reliability: 1318.0) & (original description: Putative PLE, Description = Microtubule associated protein, MAP65/ASE1 family protein, PFAM = PF03999)' T '31.1.1.2.6' 'cell.organisation.cytoskeleton.mikrotubuli.MAP65' 'nbv0.5scaffold971_121752-189781' '(at2g01910 : 689.0) Binds microtubules. Induces a crisscross mesh of microtubules, not bundles. Not involved in microtubule polymerization nor nucleation. Localizes to mitochondria.; ATMAP65-6; CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-7 (TAIR:AT1G14690.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39503 : 497.0) no description available & (gnl|cdd|67608 : 165.0) no description available & (reliability: 1378.0) & (original description: Putative PLE, Description = Microtubule-associated protein MAP65-1a, PFAM = PF03999)' T '31.1.1.2.6' 'cell.organisation.cytoskeleton.mikrotubuli.MAP65' 'niben044scf00002749ctg026_10243-16293' '(at5g51600 : 443.0) Mutant has defective roots. Essential for giant cell ontogenesis. Role in organizing the mitotic microtubule array during both early and late mitosis in all plant organs.; PLEIADE (PLE); CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-4 (TAIR:AT3G60840.1); Has 4514 Blast hits to 3795 proteins in 427 species: Archae - 120; Bacteria - 292; Metazoa - 2464; Fungi - 290; Plants - 515; Viruses - 1; Other Eukaryotes - 832 (source: NCBI BLink). & (gnl|cdd|39503 : 438.0) no description available & (gnl|cdd|67608 : 219.0) no description available & (reliability: 886.0) & (original description: Putative PLE, Description = Microtubule associated protein, MAP65/ASE1 family protein, PFAM = PF03999)' T '31.1.1.2.6' 'cell.organisation.cytoskeleton.mikrotubuli.MAP65' 'niben044scf00003332ctg005_13692-23569' '(at2g01910 : 684.0) Binds microtubules. Induces a crisscross mesh of microtubules, not bundles. Not involved in microtubule polymerization nor nucleation. Localizes to mitochondria.; ATMAP65-6; CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-7 (TAIR:AT1G14690.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39503 : 504.0) no description available & (gnl|cdd|67608 : 175.0) no description available & (reliability: 1368.0) & (original description: Putative PLE, Description = Microtubule-associated protein MAP65-1a, PFAM = PF03999)' T '31.1.1.2.6' 'cell.organisation.cytoskeleton.mikrotubuli.MAP65' 'niben044scf00038139ctg004_485-3190' '(at2g01910 : 179.0) Binds microtubules. Induces a crisscross mesh of microtubules, not bundles. Not involved in microtubule polymerization nor nucleation. Localizes to mitochondria.; ATMAP65-6; CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-7 (TAIR:AT1G14690.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39503 : 119.0) no description available & (reliability: 358.0) & (original description: Putative umc2561, Description = Microtubule associated protein family protein, putative, expressed, PFAM = PF03999)' T '31.1.1.2.6' 'cell.organisation.cytoskeleton.mikrotubuli.MAP65' 'niben101scf02494_1239785-1245356' '(at5g51600 : 642.0) Mutant has defective roots. Essential for giant cell ontogenesis. Role in organizing the mitotic microtubule array during both early and late mitosis in all plant organs.; PLEIADE (PLE); CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-4 (TAIR:AT3G60840.1); Has 4514 Blast hits to 3795 proteins in 427 species: Archae - 120; Bacteria - 292; Metazoa - 2464; Fungi - 290; Plants - 515; Viruses - 1; Other Eukaryotes - 832 (source: NCBI BLink). & (gnl|cdd|39503 : 512.0) no description available & (gnl|cdd|67608 : 239.0) no description available & (reliability: 1284.0) & (original description: Putative PLE, Description = Microtubule associated protein, MAP65/ASE1 family protein, PFAM = PF03999)' T '31.1.1.2.6' 'cell.organisation.cytoskeleton.mikrotubuli.MAP65' 'niben101scf03006_545448-553376' '(at5g55230 : 717.0) Binds and bundles microtubules. Plays a role in stabilizing anti-parallel microtubules in the central spindle at anaphase to early cytokinesis but is not essential at the midline of the phragmoplast at later stages. The timing with which the MAP65-1 was targeted to the spindle appears to be regulated by a phosphorylation sensitive switch. Enhances microtubule polymerization, promotes nucleation and stabilizes microtubules against cold treatment and dilution.; microtubule-associated proteins 65-1 (MAP65-1); FUNCTIONS IN: microtubule binding; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-2 (TAIR:AT4G26760.1). & (gnl|cdd|39503 : 509.0) no description available & (gnl|cdd|67608 : 208.0) no description available & (reliability: 1434.0) & (original description: Putative PLE, Description = Microtubule-associated protein MAP65-1a, PFAM = PF03999)' T '31.1.1.2.6' 'cell.organisation.cytoskeleton.mikrotubuli.MAP65' 'niben101scf03069_49265-54788' '(at5g51600 : 586.0) Mutant has defective roots. Essential for giant cell ontogenesis. Role in organizing the mitotic microtubule array during both early and late mitosis in all plant organs.; PLEIADE (PLE); CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-4 (TAIR:AT3G60840.1); Has 4514 Blast hits to 3795 proteins in 427 species: Archae - 120; Bacteria - 292; Metazoa - 2464; Fungi - 290; Plants - 515; Viruses - 1; Other Eukaryotes - 832 (source: NCBI BLink). & (gnl|cdd|39503 : 494.0) no description available & (gnl|cdd|67608 : 233.0) no description available & (reliability: 1172.0) & (original description: Putative PLE, Description = Microtubule associated protein, MAP65/ASE1 family protein, PFAM = PF03999)' T '31.1.1.2.6' 'cell.organisation.cytoskeleton.mikrotubuli.MAP65' 'niben101scf03951_297520-303570' '(at5g51600 : 443.0) Mutant has defective roots. Essential for giant cell ontogenesis. Role in organizing the mitotic microtubule array during both early and late mitosis in all plant organs.; PLEIADE (PLE); CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-4 (TAIR:AT3G60840.1); Has 4514 Blast hits to 3795 proteins in 427 species: Archae - 120; Bacteria - 292; Metazoa - 2464; Fungi - 290; Plants - 515; Viruses - 1; Other Eukaryotes - 832 (source: NCBI BLink). & (gnl|cdd|39503 : 434.0) no description available & (gnl|cdd|67608 : 217.0) no description available & (reliability: 886.0) & (original description: Putative PLE, Description = Microtubule associated protein, MAP65/ASE1 family protein, PFAM = PF03999)' T '31.1.1.2.6' 'cell.organisation.cytoskeleton.mikrotubuli.MAP65' 'niben101scf05080_94897-100654' '(at5g55230 : 719.0) Binds and bundles microtubules. Plays a role in stabilizing anti-parallel microtubules in the central spindle at anaphase to early cytokinesis but is not essential at the midline of the phragmoplast at later stages. The timing with which the MAP65-1 was targeted to the spindle appears to be regulated by a phosphorylation sensitive switch. Enhances microtubule polymerization, promotes nucleation and stabilizes microtubules against cold treatment and dilution.; microtubule-associated proteins 65-1 (MAP65-1); FUNCTIONS IN: microtubule binding; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-2 (TAIR:AT4G26760.1). & (gnl|cdd|39503 : 539.0) no description available & (gnl|cdd|67608 : 202.0) no description available & (reliability: 1438.0) & (original description: Putative PLE, Description = Microtubule-associated protein MAP65-1a, PFAM = PF03999)' T '31.1.1.2.6' 'cell.organisation.cytoskeleton.mikrotubuli.MAP65' 'niben101scf05346_583813-592196' '(at1g27920 : 620.0) microtubule-associated protein 65-8 (MAP65-8); CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-2 (TAIR:AT4G26760.1); Has 2013 Blast hits to 1836 proteins in 335 species: Archae - 36; Bacteria - 203; Metazoa - 697; Fungi - 206; Plants - 352; Viruses - 0; Other Eukaryotes - 519 (source: NCBI BLink). & (gnl|cdd|39503 : 425.0) no description available & (gnl|cdd|67608 : 155.0) no description available & (reliability: 1240.0) & (original description: Putative MAP65, Description = Microtubule-associated protein MAP65-1a, PFAM = PF03999)' T '31.1.1.2.6' 'cell.organisation.cytoskeleton.mikrotubuli.MAP65' 'niben101scf05917_104245-110290' '(at5g51600 : 470.0) Mutant has defective roots. Essential for giant cell ontogenesis. Role in organizing the mitotic microtubule array during both early and late mitosis in all plant organs.; PLEIADE (PLE); CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-4 (TAIR:AT3G60840.1); Has 4514 Blast hits to 3795 proteins in 427 species: Archae - 120; Bacteria - 292; Metazoa - 2464; Fungi - 290; Plants - 515; Viruses - 1; Other Eukaryotes - 832 (source: NCBI BLink). & (gnl|cdd|39503 : 441.0) no description available & (gnl|cdd|67608 : 225.0) no description available & (reliability: 940.0) & (original description: Putative PLE, Description = Microtubule-associated protein MAP65-1a, PFAM = PF03999)' T '31.1.1.2.6' 'cell.organisation.cytoskeleton.mikrotubuli.MAP65' 'niben101scf05917_106506-110069' '(at5g51600 : 173.0) Mutant has defective roots. Essential for giant cell ontogenesis. Role in organizing the mitotic microtubule array during both early and late mitosis in all plant organs.; PLEIADE (PLE); CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-4 (TAIR:AT3G60840.1); Has 4514 Blast hits to 3795 proteins in 427 species: Archae - 120; Bacteria - 292; Metazoa - 2464; Fungi - 290; Plants - 515; Viruses - 1; Other Eukaryotes - 832 (source: NCBI BLink). & (gnl|cdd|39503 : 173.0) no description available & (reliability: 346.0) & (original description: Putative PLE, Description = Microtubule-associated protein, MAP65/Ase1/PRC1, PFAM = PF03999)' T '31.1.1.2.6' 'cell.organisation.cytoskeleton.mikrotubuli.MAP65' 'niben101scf10560_151016-161149' '(at2g38720 : 424.0) microtubule-associated protein 65-5 (MAP65-5); CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-2 (TAIR:AT4G26760.1); Has 9645 Blast hits to 7381 proteins in 767 species: Archae - 226; Bacteria - 1139; Metazoa - 4615; Fungi - 969; Plants - 706; Viruses - 30; Other Eukaryotes - 1960 (source: NCBI BLink). & (gnl|cdd|39503 : 412.0) no description available & (gnl|cdd|67608 : 153.0) no description available & (reliability: 848.0) & (original description: Putative MAP65, Description = Microtubule-associated protein MAP65-1a, PFAM = PF03999)' T '31.1.1.2.6' 'cell.organisation.cytoskeleton.mikrotubuli.MAP65' 'niben101scf12585_60474-67291' '(at2g01910 : 696.0) Binds microtubules. Induces a crisscross mesh of microtubules, not bundles. Not involved in microtubule polymerization nor nucleation. Localizes to mitochondria.; ATMAP65-6; CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-7 (TAIR:AT1G14690.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39503 : 510.0) no description available & (gnl|cdd|67608 : 174.0) no description available & (reliability: 1392.0) & (original description: Putative PLE, Description = Microtubule-associated protein MAP65-1a, PFAM = PF03999)' T '31.1.1.2.10' 'cell.organisation.cytoskeleton.mikrotubuli.organizers' '' '' '31.1.1.2.10.1' 'cell.organisation.cytoskeleton.mikrotubuli.organizers.tonneau' 'nbv0.3scaffold62601_1-8329' '(at3g55000 : 284.0) Encodes a protein of unknown function that is involved in cortical microtubule organization. Mutants exhibit abnormal cell growth and patterns of division. TON1A can functionally complement TON1B and their roles appear to be redundant in plants. Encodes a novel protein that is similar to human FOP and OFD1 centrosomal proteins. Localizes to the preprophase band, cytoplasm and cell cortex where it is probably associated with the cortical cytoskeleton. TON1A associates with plant centrins CEN1 and CEN2.; TONNEAU 1A (TON1A); INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FGFR1 oncogene partner (FOP), N-terminal dimerisation domain (InterPro:IPR018993), LisH dimerisation motif (InterPro:IPR006594); BEST Arabidopsis thaliana protein match is: tonneau 1b (TON1b) (TAIR:AT3G55005.1); Has 229 Blast hits to 226 proteins in 73 species: Archae - 0; Bacteria - 3; Metazoa - 122; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 568.0) & (original description: Putative TON1A, Description = Protein TONNEAU 1a, PFAM = PF16045)' T '31.1.1.2.10.1' 'cell.organisation.cytoskeleton.mikrotubuli.organizers.tonneau' 'niben101scf00884_1-8275' '(at3g55005 : 285.0) Encodes a protein of unknown function that is involved in cortical microtubule organization. Mutants exhibit abnormal cell growth and patterns of division. TON1B appears to be redundant with TON1A. Encodes a novel protein that is similar to human FOP and OFD1 centrosomal proteins. Localizes to the preprophase band, cytoplasm and cell cortex where it is probably associated with the cortical cytoskeleton. TON1B associates with plant centrin CEN1.; tonneau 1b (TON1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: plasma membrane, microsome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594); BEST Arabidopsis thaliana protein match is: tonneau family protein (TAIR:AT3G55000.1); Has 213 Blast hits to 211 proteins in 69 species: Archae - 0; Bacteria - 0; Metazoa - 114; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 570.0) & (original description: Putative TON1B, Description = Protein TONNEAU 1b, PFAM = PF16045)' T '31.1.1.2.10.1' 'cell.organisation.cytoskeleton.mikrotubuli.organizers.tonneau' 'niben101scf04039_6551-15510' '(at3g55000 : 330.0) Encodes a protein of unknown function that is involved in cortical microtubule organization. Mutants exhibit abnormal cell growth and patterns of division. TON1A can functionally complement TON1B and their roles appear to be redundant in plants. Encodes a novel protein that is similar to human FOP and OFD1 centrosomal proteins. Localizes to the preprophase band, cytoplasm and cell cortex where it is probably associated with the cortical cytoskeleton. TON1A associates with plant centrins CEN1 and CEN2.; TONNEAU 1A (TON1A); INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FGFR1 oncogene partner (FOP), N-terminal dimerisation domain (InterPro:IPR018993), LisH dimerisation motif (InterPro:IPR006594); BEST Arabidopsis thaliana protein match is: tonneau 1b (TON1b) (TAIR:AT3G55005.1); Has 229 Blast hits to 226 proteins in 73 species: Archae - 0; Bacteria - 3; Metazoa - 122; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 660.0) & (original description: Putative TON1A, Description = Protein TONNEAU 1a, PFAM = PF16045)' T '31.1.1.3' 'cell.organisation.cytoskeleton.Myosin' 'nbv0.3scaffold4303_31413-36486' '(at5g53310 : 248.0) myosin heavy chain-related; FUNCTIONS IN: motor activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Myosin tail 2 (InterPro:IPR010926); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69535 : 120.0) no description available & (gnl|cdd|35384 : 81.2) no description available & (reliability: 496.0) & (original description: Putative At5g53310, Description = AT5g53310/K19E1_11, PFAM = PF06017)' T '31.1.1.3' 'cell.organisation.cytoskeleton.Myosin' 'nbv0.3scaffold12008_2699-18966' '(at2g24420 : 325.0) DNA repair ATPase-related; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT4G31340.1); Has 49908 Blast hits to 28607 proteins in 1979 species: Archae - 936; Bacteria - 7564; Metazoa - 22725; Fungi - 3757; Plants - 2190; Viruses - 187; Other Eukaryotes - 12549 (source: NCBI BLink). & (reliability: 640.0) & (original description: Putative PGSC0003DMG400014854, Description = DNA repair ATPase-related family protein, PFAM = )' T '31.1.1.3' 'cell.organisation.cytoskeleton.Myosin' 'nbv0.3scaffold28418_3463-14364' '(at2g24420 : 379.0) DNA repair ATPase-related; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT4G31340.1); Has 49908 Blast hits to 28607 proteins in 1979 species: Archae - 936; Bacteria - 7564; Metazoa - 22725; Fungi - 3757; Plants - 2190; Viruses - 187; Other Eukaryotes - 12549 (source: NCBI BLink). & (reliability: 756.0) & (original description: Putative At4g31340, Description = AT4G31340 protein, PFAM = )' T '31.1.1.3' 'cell.organisation.cytoskeleton.Myosin' 'nbv0.3scaffold112717_1-1963' '(at5g59210 : 94.4) myosin heavy chain-related; Has 60083 Blast hits to 34721 proteins in 2231 species: Archae - 693; Bacteria - 7635; Metazoa - 30612; Fungi - 4945; Plants - 2863; Viruses - 142; Other Eukaryotes - 13193 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative OTP80, Description = BnaA10g12150D protein, PFAM = )' T '31.1.1.3' 'cell.organisation.cytoskeleton.Myosin' 'nbv0.5scaffold43_1122836-1126356' '(at4g03620 : 189.0) myosin heavy chain-related; Has 2049 Blast hits to 1675 proteins in 293 species: Archae - 28; Bacteria - 210; Metazoa - 903; Fungi - 186; Plants - 47; Viruses - 4; Other Eukaryotes - 671 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative BnaC09g00870D, Description = BnaC09g00870D protein, PFAM = )' T '31.1.1.3' 'cell.organisation.cytoskeleton.Myosin' 'nbv0.5scaffold1010_50855-64224' '(at2g34730 : 294.0) myosin heavy chain-related; LOCATED IN: mitochondrion. & (reliability: 588.0) & (original description: Putative WAP, Description = WPP domain-associated protein, PFAM = )' T '31.1.1.3' 'cell.organisation.cytoskeleton.Myosin' 'niben044scf00005420ctg006_27771-34955' '(at1g51405 : 185.0) myosin-related; Has 11803 Blast hits to 7804 proteins in 640 species: Archae - 183; Bacteria - 701; Metazoa - 7055; Fungi - 867; Plants - 542; Viruses - 4; Other Eukaryotes - 2451 (source: NCBI BLink). & (reliability: 370.0) & (original description: Putative At1g51405, Description = Myosin-related protein, PFAM = )' T '31.1.1.3' 'cell.organisation.cytoskeleton.Myosin' 'niben044scf00005766ctg011_23587-25926' '(at5g59210 : 102.0) myosin heavy chain-related; Has 60083 Blast hits to 34721 proteins in 2231 species: Archae - 693; Bacteria - 7635; Metazoa - 30612; Fungi - 4945; Plants - 2863; Viruses - 142; Other Eukaryotes - 13193 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative OTP80, Description = BnaA10g12150D protein, PFAM = )' T '31.1.1.3' 'cell.organisation.cytoskeleton.Myosin' 'niben044scf00016691ctg011_2985-7634' '(at4g31340 : 84.3) myosin heavy chain-related; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: DNA repair ATPase-related (TAIR:AT2G24420.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative PGSC0003DMG400028754, Description = Putative ovule protein, PFAM = )' T '31.1.1.3' 'cell.organisation.cytoskeleton.Myosin' 'niben101scf00088_44505-52406' '(at2g34730 : 350.0) myosin heavy chain-related; LOCATED IN: mitochondrion. & (reliability: 700.0) & (original description: Putative WAP, Description = WPP domain-associated protein, PFAM = )' T '31.1.1.3' 'cell.organisation.cytoskeleton.Myosin' 'niben101scf01225_554052-560359' '(at5g61200 : 208.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT5G07890.3). & (reliability: 378.0) & (original description: Putative At5g07890, Description = AT5G07890 protein, PFAM = )' T '31.1.1.3' 'cell.organisation.cytoskeleton.Myosin' 'niben101scf01232_1-8085' '(at5g53310 : 243.0) myosin heavy chain-related; FUNCTIONS IN: motor activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Myosin tail 2 (InterPro:IPR010926); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69535 : 113.0) no description available & (reliability: 486.0) & (original description: Putative At5g53310, Description = AT5g53310/K19E1_11, PFAM = PF06017)' T '31.1.1.3' 'cell.organisation.cytoskeleton.Myosin' 'niben101scf01330_74352-91190' '(at2g24420 : 353.0) DNA repair ATPase-related; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT4G31340.1); Has 49908 Blast hits to 28607 proteins in 1979 species: Archae - 936; Bacteria - 7564; Metazoa - 22725; Fungi - 3757; Plants - 2190; Viruses - 187; Other Eukaryotes - 12549 (source: NCBI BLink). & (reliability: 696.0) & (original description: Putative PGSC0003DMG400014854, Description = Putative uncharacterized protein At4g31340, PFAM = )' T '31.1.1.3' 'cell.organisation.cytoskeleton.Myosin' 'niben101scf01779_407505-419087' '(at4g31340 : 354.0) myosin heavy chain-related; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: DNA repair ATPase-related (TAIR:AT2G24420.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 708.0) & (original description: Putative At4g31340, Description = AT4G31340 protein, PFAM = )' T '31.1.1.3' 'cell.organisation.cytoskeleton.Myosin' 'niben101scf01899_394420-397940' '(at4g03620 : 194.0) myosin heavy chain-related; Has 2049 Blast hits to 1675 proteins in 293 species: Archae - 28; Bacteria - 210; Metazoa - 903; Fungi - 186; Plants - 47; Viruses - 4; Other Eukaryotes - 671 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative BnaC09g00870D, Description = BnaC09g00870D protein, PFAM = )' T '31.1.1.3' 'cell.organisation.cytoskeleton.Myosin' 'niben101scf02299_285772-289178' '(at4g03620 : 212.0) myosin heavy chain-related; Has 2049 Blast hits to 1675 proteins in 293 species: Archae - 28; Bacteria - 210; Metazoa - 903; Fungi - 186; Plants - 47; Viruses - 4; Other Eukaryotes - 671 (source: NCBI BLink). & (reliability: 424.0) & (original description: Putative BnaC09g00870D, Description = BnaC09g00870D protein, PFAM = )' T '31.1.1.3' 'cell.organisation.cytoskeleton.Myosin' 'niben101scf02972_2447-8049' '(at5g41790 : 108.0) encodes a protein that physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. expression is not regulated by light.; COP1-interactive protein 1 (CIP1); FUNCTIONS IN: protein binding; INVOLVED IN: regulation of protein import into nucleus; LOCATED IN: cytoskeleton, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G64330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35383 : 81.4) no description available & (reliability: 208.0) & (original description: Putative PGSC0003DMG400005787, Description = Putative intracellular protein transport protein USO1-like, PFAM = PF07765)' T '31.1.1.3' 'cell.organisation.cytoskeleton.Myosin' 'niben101scf03306_179079-187033' '(at4g31340 : 241.0) myosin heavy chain-related; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: DNA repair ATPase-related (TAIR:AT2G24420.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative Os08g0519400, Description = Os08g0519400 protein, PFAM = )' T '31.1.1.3' 'cell.organisation.cytoskeleton.Myosin' 'niben101scf04323_231864-239636' '(at2g34730 : 337.0) myosin heavy chain-related; LOCATED IN: mitochondrion. & (reliability: 674.0) & (original description: Putative WAP, Description = WPP domain-associated protein, PFAM = )' T '31.1.1.3' 'cell.organisation.cytoskeleton.Myosin' 'niben101scf04473_1432257-1442283' '(at2g40820 : 545.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT3G56480.1); Has 203 Blast hits to 195 proteins in 64 species: Archae - 3; Bacteria - 13; Metazoa - 26; Fungi - 15; Plants - 101; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 1090.0) & (original description: Putative SCAB3, Description = Stomatal closure-related actin-binding protein 3, PFAM = PF16709;PF16712;PF16711)' T '31.1.1.3' 'cell.organisation.cytoskeleton.Myosin' 'niben101scf04511_195543-198007' '(at4g03620 : 100.0) myosin heavy chain-related; Has 2049 Blast hits to 1675 proteins in 293 species: Archae - 28; Bacteria - 210; Metazoa - 903; Fungi - 186; Plants - 47; Viruses - 4; Other Eukaryotes - 671 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative At4g03620, Description = Myosin heavy chain-related, putative, PFAM = )' T '31.1.1.3' 'cell.organisation.cytoskeleton.Myosin' 'niben101scf05262_125971-130552' '(at5g53310 : 248.0) myosin heavy chain-related; FUNCTIONS IN: motor activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Myosin tail 2 (InterPro:IPR010926); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69535 : 119.0) no description available & (gnl|cdd|35384 : 80.4) no description available & (reliability: 496.0) & (original description: Putative At5g53310, Description = AT5g53310/K19E1_11, PFAM = PF06017)' T '31.1.1.3' 'cell.organisation.cytoskeleton.Myosin' 'niben101scf06898_397523-417715' '(at2g34730 : 294.0) myosin heavy chain-related; LOCATED IN: mitochondrion. & (reliability: 588.0) & (original description: Putative WAP, Description = WPP domain-associated protein, PFAM = )' T '31.1.1.3.8' 'cell.organisation.cytoskeleton.Myosin.Class VII' 'nbv0.5scaffold3468_167159-183281' '(at5g54280 : 1144.0) Type VII myosin gene; myosin 2 (ATM2); FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: plasma membrane, myosin complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G27370.1); Has 6721 Blast hits to 6298 proteins in 733 species: Archae - 3; Bacteria - 9; Metazoa - 4442; Fungi - 716; Plants - 447; Viruses - 0; Other Eukaryotes - 1104 (source: NCBI BLink). & (gnl|cdd|30105 : 954.0) no description available & (gnl|cdd|35382 : 668.0) no description available & (reliability: 2288.0) & (original description: Putative hamy1, Description = Myosin-J heavy chain, PFAM = PF00612;PF00612;PF00063)' T '31.1.1.3.8' 'cell.organisation.cytoskeleton.Myosin.Class VII' 'niben044scf00008970ctg004_1-31057' '(at3g19960 : 1711.0) member of Myosin-like proteins; myosin 1 (ATM1); CONTAINS InterPro DOMAIN/s: Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G50360.1); Has 7421 Blast hits to 6650 proteins in 772 species: Archae - 0; Bacteria - 19; Metazoa - 4930; Fungi - 705; Plants - 652; Viruses - 1; Other Eukaryotes - 1114 (source: NCBI BLink). & (gnl|cdd|30105 : 1234.0) no description available & (gnl|cdd|35382 : 890.0) no description available & (reliability: 3422.0) & (original description: Putative mhcA, Description = Myosin-2 heavy chain, PFAM = PF00612;PF00612;PF00612;PF00063)' T '31.1.1.3.8' 'cell.organisation.cytoskeleton.Myosin.Class VII' 'niben101scf02989_90883-95716' '(at3g19960 : 163.0) member of Myosin-like proteins; myosin 1 (ATM1); CONTAINS InterPro DOMAIN/s: Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G50360.1); Has 7421 Blast hits to 6650 proteins in 772 species: Archae - 0; Bacteria - 19; Metazoa - 4930; Fungi - 705; Plants - 652; Viruses - 1; Other Eukaryotes - 1114 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative PGSC0003DMG400022412, Description = , PFAM = PF00612;PF00612)' T '31.1.1.3.8' 'cell.organisation.cytoskeleton.Myosin.Class VII' 'niben101scf04504_305399-341157' '(at5g54280 : 1188.0) Type VII myosin gene; myosin 2 (ATM2); FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: plasma membrane, myosin complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G27370.1); Has 6721 Blast hits to 6298 proteins in 733 species: Archae - 3; Bacteria - 9; Metazoa - 4442; Fungi - 716; Plants - 447; Viruses - 0; Other Eukaryotes - 1104 (source: NCBI BLink). & (gnl|cdd|30105 : 1100.0) no description available & (gnl|cdd|35382 : 751.0) no description available & (reliability: 2376.0) & (original description: Putative hamy1, Description = Myosin-J heavy chain, PFAM = PF00063;PF00612;PF00612;PF00612)' T '31.1.1.3.8' 'cell.organisation.cytoskeleton.Myosin.Class VII' 'niben101scf08157_178387-199274' '(at5g54280 : 1238.0) Type VII myosin gene; myosin 2 (ATM2); FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: plasma membrane, myosin complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G27370.1); Has 6721 Blast hits to 6298 proteins in 733 species: Archae - 3; Bacteria - 9; Metazoa - 4442; Fungi - 716; Plants - 447; Viruses - 0; Other Eukaryotes - 1104 (source: NCBI BLink). & (gnl|cdd|30105 : 1057.0) no description available & (gnl|cdd|35382 : 761.0) no description available & (reliability: 2476.0) & (original description: Putative mhcA, Description = Myosin-2 heavy chain, PFAM = PF00063;PF00612;PF00612)' T '31.1.1.3.11' 'cell.organisation.cytoskeleton.Myosin.Class XI' 'nbv0.3scaffold15057_15376-39516' '(at5g43900 : 2300.0) Encodes a member of the type XI myosin protein family that binds F-actin and co-localizes with actin filaments and peroxisomes. Homozygous mutants are reported to have pleiotropic effects in growth and fertility and may also be lethal. This protein is also involved in root hair growth and organelle trafficking. This protein interacts with RabC2a and RabD1 in a GTP-dependent manner.; myosin 2 (MYA2); CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI B (TAIR:AT1G04160.1). & (gnl|cdd|30106 : 1296.0) no description available & (gnl|cdd|35382 : 1025.0) no description available & (reliability: 4600.0) & (original description: Putative hamy4, Description = Myosin-J heavy chain, PFAM = PF00612;PF00612;PF00612;PF00612;PF00612;PF00063;PF02736;PF01843)' T '31.1.1.3.11' 'cell.organisation.cytoskeleton.Myosin.Class XI' 'nbv0.3scaffold43041_4556-18019' '(at2g31900 : 2179.0) Encodes an novel myosin isoform.; myosin-like protein XIF (XIF); CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT5G20490.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30106 : 1277.0) no description available & (gnl|cdd|35382 : 1002.0) no description available & (reliability: 4358.0) & (original description: Putative hamy4, Description = Myosin-J heavy chain, PFAM = PF00063;PF01843;PF00612;PF00612;PF00612;PF00612;PF02736)' T '31.1.1.3.11' 'cell.organisation.cytoskeleton.Myosin.Class XI' 'nbv0.5scaffold544_232212-273003' '(at4g33200 : 2207.0) member of Myosin-like proteins; XI-I; FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: myosin complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT1G54560.1). & (gnl|cdd|30106 : 1131.0) no description available & (gnl|cdd|35382 : 907.0) no description available & (reliability: 4414.0) & (original description: Putative hamy4, Description = Myosin-J heavy chain, PFAM = PF00063;PF01843;PF00612;PF00612;PF00612;PF00612;PF00612;PF00612)' T '31.1.1.3.11' 'cell.organisation.cytoskeleton.Myosin.Class XI' 'nbv0.5scaffold1823_244139-262047' '(at1g54560 : 1193.0) member of Myosin-like proteins; XIE; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT1G08730.1); Has 72336 Blast hits to 42875 proteins in 2809 species: Archae - 1097; Bacteria - 9896; Metazoa - 36316; Fungi - 5231; Plants - 3078; Viruses - 250; Other Eukaryotes - 16468 (source: NCBI BLink). & (gnl|cdd|30106 : 1042.0) no description available & (gnl|cdd|35382 : 785.0) no description available & (reliability: 2386.0) & (original description: Putative hamy4, Description = Myosin-J heavy chain, PFAM = PF00063;PF02736;PF00612)' T '31.1.1.3.11' 'cell.organisation.cytoskeleton.Myosin.Class XI' 'nbv0.5scaffold2651_150371-287240' '(at1g04160 : 963.0) Encodes a member of the type XI myosin protein family involved in root hair elongation.; myosin XI B (XIB); FUNCTIONS IN: motor activity; INVOLVED IN: root hair elongation, actin filament-based movement; LOCATED IN: myosin complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin 2 (TAIR:AT5G43900.3); Has 26358 Blast hits to 18103 proteins in 1674 species: Archae - 321; Bacteria - 2193; Metazoa - 15182; Fungi - 1812; Plants - 1278; Viruses - 89; Other Eukaryotes - 5483 (source: NCBI BLink). & (gnl|cdd|30106 : 871.0) no description available & (gnl|cdd|35382 : 713.0) no description available & (reliability: 1926.0) & (original description: Putative hamy4, Description = Myosin-J heavy chain, PFAM = PF00612;PF00612;PF00612;PF00612;PF00612;PF00063;PF00063;PF02736)' T '31.1.1.3.11' 'cell.organisation.cytoskeleton.Myosin.Class XI' 'nbv0.5scaffold4541_63441-91157' '(at1g04600 : 1929.0) member of Myosin-like proteins; myosin XI A (XIA); FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: myosin complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Prefoldin (InterPro:IPR009053), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI D (TAIR:AT2G33240.1); Has 140144 Blast hits to 79260 proteins in 3527 species: Archae - 2295; Bacteria - 25176; Metazoa - 58445; Fungi - 12073; Plants - 6566; Viruses - 744; Other Eukaryotes - 34845 (source: NCBI BLink). & (gnl|cdd|30106 : 1265.0) no description available & (gnl|cdd|35382 : 990.0) no description available & (reliability: 3858.0) & (original description: Putative hamy4, Description = Myosin-J heavy chain, PFAM = PF01843;PF02736;PF00612;PF00612;PF00612;PF00612;PF00612;PF00063)' T '31.1.1.3.11' 'cell.organisation.cytoskeleton.Myosin.Class XI' 'niben044scf00004550ctg005_1-14830' '(at5g20490 : 2376.0) Encodes a member of the type XI myosin protein family involved in root hair growth, trichome development, and organelle trafficking. This gene appears to be expressed at low levels throughout the plant.; XIK; FUNCTIONS IN: motor activity; INVOLVED IN: in 11 processes; LOCATED IN: myosin complex; EXPRESSED IN: stem, fruit, flower, root, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT1G54560.1); Has 39115 Blast hits to 25959 proteins in 2421 species: Archae - 443; Bacteria - 5231; Metazoa - 20936; Fungi - 2937; Plants - 2132; Viruses - 125; Other Eukaryotes - 7311 (source: NCBI BLink). & (gnl|cdd|30106 : 1322.0) no description available & (gnl|cdd|35382 : 1014.0) no description available & (reliability: 4752.0) & (original description: Putative hamy4, Description = Myosin-J heavy chain, PFAM = PF00063;PF00612;PF00612;PF00612;PF00612;PF02736;PF01843)' T '31.1.1.3.11' 'cell.organisation.cytoskeleton.Myosin.Class XI' 'niben044scf00012233ctg005_77-20294' '(at1g04600 : 1684.0) member of Myosin-like proteins; myosin XI A (XIA); FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: myosin complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Prefoldin (InterPro:IPR009053), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI D (TAIR:AT2G33240.1); Has 140144 Blast hits to 79260 proteins in 3527 species: Archae - 2295; Bacteria - 25176; Metazoa - 58445; Fungi - 12073; Plants - 6566; Viruses - 744; Other Eukaryotes - 34845 (source: NCBI BLink). & (gnl|cdd|30106 : 1205.0) no description available & (gnl|cdd|35382 : 933.0) no description available & (reliability: 3368.0) & (original description: Putative hamy4, Description = Myosin-J heavy chain, PFAM = PF01843;PF00063;PF00612;PF00612;PF00612;PF00612;PF00612)' T '31.1.1.3.11' 'cell.organisation.cytoskeleton.Myosin.Class XI' 'niben044scf00012233ctg005_16855-19122' '(at5g43900 : 155.0) Encodes a member of the type XI myosin protein family that binds F-actin and co-localizes with actin filaments and peroxisomes. Homozygous mutants are reported to have pleiotropic effects in growth and fertility and may also be lethal. This protein is also involved in root hair growth and organelle trafficking. This protein interacts with RabC2a and RabD1 in a GTP-dependent manner.; myosin 2 (MYA2); CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI B (TAIR:AT1G04160.1). & (reliability: 310.0) & (original description: Putative hamy4, Description = Myosin-J heavy chain, PFAM = )' T '31.1.1.3.11' 'cell.organisation.cytoskeleton.Myosin.Class XI' 'niben044scf00030359ctg001_6503-10276' '(at5g43900 : 330.0) Encodes a member of the type XI myosin protein family that binds F-actin and co-localizes with actin filaments and peroxisomes. Homozygous mutants are reported to have pleiotropic effects in growth and fertility and may also be lethal. This protein is also involved in root hair growth and organelle trafficking. This protein interacts with RabC2a and RabD1 in a GTP-dependent manner.; myosin 2 (MYA2); CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI B (TAIR:AT1G04160.1). & (gnl|cdd|30106 : 273.0) no description available & (gnl|cdd|35382 : 206.0) no description available & (reliability: 660.0) & (original description: Putative hamy4, Description = Myosin-J heavy chain, PFAM = PF00063;PF02736)' T '31.1.1.3.11' 'cell.organisation.cytoskeleton.Myosin.Class XI' 'niben101scf01538_91735-106152' '(at2g31900 : 2220.0) Encodes an novel myosin isoform.; myosin-like protein XIF (XIF); CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT5G20490.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30106 : 1280.0) no description available & (gnl|cdd|35382 : 1007.0) no description available & (reliability: 4440.0) & (original description: Putative hamy4, Description = Myosin-J heavy chain, PFAM = PF00063;PF02736;PF00612;PF00612;PF00612;PF00612;PF01843)' T '31.1.1.3.11' 'cell.organisation.cytoskeleton.Myosin.Class XI' 'niben101scf01922_996778-1025362' '(at1g04600 : 1495.0) member of Myosin-like proteins; myosin XI A (XIA); FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: myosin complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Prefoldin (InterPro:IPR009053), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI D (TAIR:AT2G33240.1); Has 140144 Blast hits to 79260 proteins in 3527 species: Archae - 2295; Bacteria - 25176; Metazoa - 58445; Fungi - 12073; Plants - 6566; Viruses - 744; Other Eukaryotes - 34845 (source: NCBI BLink). & (gnl|cdd|30106 : 856.0) no description available & (gnl|cdd|35382 : 700.0) no description available & (reliability: 2990.0) & (original description: Putative hamy4, Description = Myosin-J heavy chain, PFAM = PF00612;PF00612;PF00612;PF00612;PF00612;PF01843;PF00063;PF00063;PF02736)' T '31.1.1.3.11' 'cell.organisation.cytoskeleton.Myosin.Class XI' 'niben101scf02425_437192-453239' '(at5g20490 : 2388.0) Encodes a member of the type XI myosin protein family involved in root hair growth, trichome development, and organelle trafficking. This gene appears to be expressed at low levels throughout the plant.; XIK; FUNCTIONS IN: motor activity; INVOLVED IN: in 11 processes; LOCATED IN: myosin complex; EXPRESSED IN: stem, fruit, flower, root, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT1G54560.1); Has 39115 Blast hits to 25959 proteins in 2421 species: Archae - 443; Bacteria - 5231; Metazoa - 20936; Fungi - 2937; Plants - 2132; Viruses - 125; Other Eukaryotes - 7311 (source: NCBI BLink). & (gnl|cdd|30106 : 1325.0) no description available & (gnl|cdd|35382 : 1012.0) no description available & (reliability: 4776.0) & (original description: Putative hamy4, Description = Myosin-J heavy chain, PFAM = PF02736;PF00063;PF00612;PF00612;PF00612;PF00612;PF01843)' T '31.1.1.3.11' 'cell.organisation.cytoskeleton.Myosin.Class XI' 'niben101scf02846_78037-93433' '(at1g54560 : 2341.0) member of Myosin-like proteins; XIE; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT1G08730.1); Has 72336 Blast hits to 42875 proteins in 2809 species: Archae - 1097; Bacteria - 9896; Metazoa - 36316; Fungi - 5231; Plants - 3078; Viruses - 250; Other Eukaryotes - 16468 (source: NCBI BLink). & (gnl|cdd|30106 : 1297.0) no description available & (gnl|cdd|35382 : 996.0) no description available & (reliability: 4682.0) & (original description: Putative hamy4, Description = Myosin-J heavy chain, PFAM = PF01843;PF02736;PF00063;PF00612;PF00612;PF00612;PF00612)' T '31.1.1.3.11' 'cell.organisation.cytoskeleton.Myosin.Class XI' 'niben101scf03263_414003-475067' '(gnl|cdd|30106 : 252.0) no description available & (at5g43900 : 236.0) Encodes a member of the type XI myosin protein family that binds F-actin and co-localizes with actin filaments and peroxisomes. Homozygous mutants are reported to have pleiotropic effects in growth and fertility and may also be lethal. This protein is also involved in root hair growth and organelle trafficking. This protein interacts with RabC2a and RabD1 in a GTP-dependent manner.; myosin 2 (MYA2); CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI B (TAIR:AT1G04160.1). & (gnl|cdd|35382 : 183.0) no description available & (reliability: 472.0) & (original description: Putative hamy4, Description = Myosin-J heavy chain, PFAM = PF00063)' T '31.1.1.3.11' 'cell.organisation.cytoskeleton.Myosin.Class XI' 'niben101scf03263_453182-475764' '(at5g43900 : 2303.0) Encodes a member of the type XI myosin protein family that binds F-actin and co-localizes with actin filaments and peroxisomes. Homozygous mutants are reported to have pleiotropic effects in growth and fertility and may also be lethal. This protein is also involved in root hair growth and organelle trafficking. This protein interacts with RabC2a and RabD1 in a GTP-dependent manner.; myosin 2 (MYA2); CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI B (TAIR:AT1G04160.1). & (gnl|cdd|30106 : 1298.0) no description available & (gnl|cdd|35382 : 1026.0) no description available & (reliability: 4606.0) & (original description: Putative hamy4, Description = Myosin-J heavy chain, PFAM = PF00063;PF00612;PF00612;PF00612;PF00612;PF00612;PF02736;PF01843)' T '31.1.1.3.11' 'cell.organisation.cytoskeleton.Myosin.Class XI' 'niben101scf03934_224526-251959' '(at5g43900 : 2160.0) Encodes a member of the type XI myosin protein family that binds F-actin and co-localizes with actin filaments and peroxisomes. Homozygous mutants are reported to have pleiotropic effects in growth and fertility and may also be lethal. This protein is also involved in root hair growth and organelle trafficking. This protein interacts with RabC2a and RabD1 in a GTP-dependent manner.; myosin 2 (MYA2); CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI B (TAIR:AT1G04160.1). & (gnl|cdd|30106 : 1258.0) no description available & (gnl|cdd|35382 : 992.0) no description available & (reliability: 4320.0) & (original description: Putative hamy4, Description = Myosin-J heavy chain, PFAM = PF02736;PF00063;PF00612;PF00612;PF00612;PF00612;PF00612;PF01843)' T '31.1.1.3.11' 'cell.organisation.cytoskeleton.Myosin.Class XI' 'niben101scf03934_230426-235901' '(gnl|cdd|30106 : 596.0) no description available & (at1g04160 : 523.0) Encodes a member of the type XI myosin protein family involved in root hair elongation.; myosin XI B (XIB); FUNCTIONS IN: motor activity; INVOLVED IN: root hair elongation, actin filament-based movement; LOCATED IN: myosin complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin 2 (TAIR:AT5G43900.3); Has 26358 Blast hits to 18103 proteins in 1674 species: Archae - 321; Bacteria - 2193; Metazoa - 15182; Fungi - 1812; Plants - 1278; Viruses - 89; Other Eukaryotes - 5483 (source: NCBI BLink). & (gnl|cdd|35382 : 433.0) no description available & (reliability: 1046.0) & (original description: Putative hamy4, Description = Myosin-J heavy chain, PFAM = PF00063)' T '31.1.1.3.11' 'cell.organisation.cytoskeleton.Myosin.Class XI' 'niben101scf04193_221792-244180' '(at1g54560 : 1483.0) member of Myosin-like proteins; XIE; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT1G08730.1); Has 72336 Blast hits to 42875 proteins in 2809 species: Archae - 1097; Bacteria - 9896; Metazoa - 36316; Fungi - 5231; Plants - 3078; Viruses - 250; Other Eukaryotes - 16468 (source: NCBI BLink). & (gnl|cdd|30106 : 1260.0) no description available & (gnl|cdd|35382 : 962.0) no description available & (reliability: 2966.0) & (original description: Putative hamy4, Description = Myosin-J heavy chain, PFAM = PF02736;PF00612;PF00063)' T '31.1.1.3.11' 'cell.organisation.cytoskeleton.Myosin.Class XI' 'niben101scf08669_20919-98716' '(at4g33200 : 2209.0) member of Myosin-like proteins; XI-I; FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: myosin complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT1G54560.1). & (gnl|cdd|30106 : 1137.0) no description available & (gnl|cdd|35382 : 914.0) no description available & (reliability: 4418.0) & (original description: Putative hamy4, Description = Myosin-J heavy chain, PFAM = PF00063;PF00612;PF00612;PF00612;PF00612;PF00612;PF00612;PF01843)' T '31.1.1.3.11' 'cell.organisation.cytoskeleton.Myosin.Class XI' 'niben101scf09510_88133-107108' '(at1g54560 : 2472.0) member of Myosin-like proteins; XIE; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT1G08730.1); Has 72336 Blast hits to 42875 proteins in 2809 species: Archae - 1097; Bacteria - 9896; Metazoa - 36316; Fungi - 5231; Plants - 3078; Viruses - 250; Other Eukaryotes - 16468 (source: NCBI BLink). & (gnl|cdd|30106 : 1284.0) no description available & (gnl|cdd|35382 : 990.0) no description available & (reliability: 4944.0) & (original description: Putative hamy4, Description = Myosin-J heavy chain, PFAM = PF00063;PF02736;PF00612;PF00612;PF00612;PF01843)' T '31.1.1.3.11' 'cell.organisation.cytoskeleton.Myosin.Class XI' 'niben101scf11646_254407-283011' '(at1g04600 : 1902.0) member of Myosin-like proteins; myosin XI A (XIA); FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: myosin complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Prefoldin (InterPro:IPR009053), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI D (TAIR:AT2G33240.1); Has 140144 Blast hits to 79260 proteins in 3527 species: Archae - 2295; Bacteria - 25176; Metazoa - 58445; Fungi - 12073; Plants - 6566; Viruses - 744; Other Eukaryotes - 34845 (source: NCBI BLink). & (gnl|cdd|30106 : 1270.0) no description available & (gnl|cdd|35382 : 994.0) no description available & (reliability: 3804.0) & (original description: Putative hamy4, Description = Myosin-J heavy chain, PFAM = PF02736;PF00063;PF00612;PF00612;PF00612;PF00612;PF00612;PF01843)' T '31.1.1.3.11' 'cell.organisation.cytoskeleton.Myosin.Class XI' 'niben101scf11646_277078-279345' '(at1g04600 : 157.0) member of Myosin-like proteins; myosin XI A (XIA); FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: myosin complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Prefoldin (InterPro:IPR009053), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI D (TAIR:AT2G33240.1); Has 140144 Blast hits to 79260 proteins in 3527 species: Archae - 2295; Bacteria - 25176; Metazoa - 58445; Fungi - 12073; Plants - 6566; Viruses - 744; Other Eukaryotes - 34845 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative hamy4, Description = Myosin-J heavy chain, PFAM = )' T '31.2' 'cell.division' 'nbv0.3scaffold2239_248-7460' '(q96372|cdc48_capan : 1430.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (at5g03340 : 1399.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: protein binding, ATPase activity; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: cell division cycle 48 (TAIR:AT3G09840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35949 : 887.0) no description available & (gnl|cdd|30812 : 478.0) no description available & (reliability: 2798.0) & (original description: Putative cdcD, Description = Transitional endoplasmic reticulum ATPase, PFAM = PF02933;PF00004;PF00004;PF02359)' T '31.2' 'cell.division' 'nbv0.3scaffold2898_1360-14308' '(at5g42140 : 1431.0) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Zinc finger, FYVE-type (InterPro:IPR000306), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-related (InterPro:IPR017455), Pleckstrin homology-type (InterPro:IPR011993), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT1G76950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|34783 : 127.0) no description available & (gnl|cdd|36640 : 114.0) no description available & (reliability: 2862.0) & (original description: Putative PRAF1, Description = Regulator of chromosome condensation and FYVE zinc finger domain-containing protein, PFAM = PF08381;PF13713;PF01363;PF16457;PF00415;PF00415;PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'nbv0.3scaffold4596_50601-67771' '(at2g27170 : 1184.0) Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment.; TITAN7 (TTN7); FUNCTIONS IN: ATP binding; INVOLVED IN: sister chromatid cohesion, chromosome segregation; LOCATED IN: cohesin complex, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosomes 2 (TAIR:AT5G62410.1); Has 158776 Blast hits to 77347 proteins in 3496 species: Archae - 2059; Bacteria - 28403; Metazoa - 67946; Fungi - 11949; Plants - 6773; Viruses - 706; Other Eukaryotes - 40940 (source: NCBI BLink). & (gnl|cdd|36182 : 955.0) no description available & (gnl|cdd|31389 : 369.0) no description available & (reliability: 2368.0) & (original description: Putative SMC3, Description = Structural maintenance of chromosomes protein 3, PFAM = PF06470;PF02463)' T '31.2' 'cell.division' 'nbv0.3scaffold9042_9946-20491' '(at1g19880 : 655.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1); Has 17859 Blast hits to 6314 proteins in 497 species: Archae - 78; Bacteria - 2347; Metazoa - 6181; Fungi - 1100; Plants - 2708; Viruses - 16; Other Eukaryotes - 5429 (source: NCBI BLink). & (gnl|cdd|36640 : 528.0) no description available & (gnl|cdd|34783 : 107.0) no description available & (reliability: 1310.0) & (original description: Putative Rcc2, Description = Protein Rcc2, PFAM = PF00415;PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'nbv0.3scaffold9260_1810-11385' '(at1g15660 : 119.0) Encodes a homologue of the human centromeric protein C (CENP-C). CENP-C co-localizes with the 180 bp centromeric regions of chromosomes throughout the cell cycle, but does not completely cover the 180 bp regions.; centromere protein C (CENP-C); Has 380 Blast hits to 353 proteins in 129 species: Archae - 0; Bacteria - 6; Metazoa - 108; Fungi - 26; Plants - 78; Viruses - 8; Other Eukaryotes - 154 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative CENPC1, Description = Centromere protein C1, PFAM = )' T '31.2' 'cell.division' 'nbv0.3scaffold10258_41373-48839' '(gnl|cdd|30231 : 486.0) no description available & (at5g55280 : 475.0) Encodes one of two FtsZ proteins, tubulin-like proteins, in Arabidopsis. It is involved in chloroplast division.; homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (FTSZ1-1); FUNCTIONS IN: protein binding, structural molecule activity; INVOLVED IN: chloroplast fission, plastid fission; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cell division protein FtsZ, N-terminal (InterPro:IPR000158), Tubulin, conserved site (InterPro:IPR017975), Cell division protein FtsZ, conserved site (InterPro:IPR020805), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: Tubulin/FtsZ family protein (TAIR:AT3G52750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 950.0) & (original description: Putative ftsZ, Description = Chloroplast FtsZ-like protein, PFAM = PF00091;PF12327)' T '31.2' 'cell.division' 'nbv0.3scaffold13396_24587-33125' '(at3g12280 : 917.0) Encodes a retinoblastoma homologue RETINOBLASTOMA-RELATED protein (RBR or RBR1). RBR controls nuclear proliferation in the female gametophyte. Also required for correct differentiation of male gametophytic cell types. Regulates stem cell maintenance in Arabidopsis roots. Involved in the determination of cell cycle arrest in G1 phase after sucrose starvation. RBR1 is also involved in regulation of imprinted genes. Together with MSI1 it represses the expression of MET1. This in turn activates expression of the imprinted genes FIS2 and FWA.; retinoblastoma-related 1 (RBR1); FUNCTIONS IN: transcription factor binding; INVOLVED IN: in 15 processes; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Retinoblastoma-associated protein, B-box (InterPro:IPR002719), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Retinoblastoma-associated protein, A-box (InterPro:IPR002720). & (gnl|cdd|36228 : 447.0) no description available & (gnl|cdd|85726 : 238.0) no description available & (reliability: 1834.0) & (original description: Putative pRB, Description = Retinoblastoma-related protein, PFAM = PF01858;PF11934)' T '31.2' 'cell.division' 'nbv0.3scaffold15905_25985-28815' '(gnl|cdd|38293 : 392.0) no description available & (at5g40770 : 388.0) prohibitin 3; prohibitin 3 (PHB3); INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Prohibitin (InterPro:IPR000163), Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: prohibitin 4 (TAIR:AT3G27280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|48213 : 306.0) no description available & (reliability: 776.0) & (original description: Putative PHB3, Description = Prohibitin-3, mitochondrial, PFAM = PF01145)' T '31.2' 'cell.division' 'nbv0.3scaffold19380_22061-30443' '(at3g55580 : 553.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT3G53830.1); Has 20178 Blast hits to 6212 proteins in 476 species: Archae - 78; Bacteria - 2696; Metazoa - 7040; Fungi - 1181; Plants - 2975; Viruses - 2; Other Eukaryotes - 6206 (source: NCBI BLink). & (gnl|cdd|34783 : 131.0) no description available & (gnl|cdd|36640 : 106.0) no description available & (reliability: 1106.0) & (original description: Putative BnaC08g26510D, Description = BnaC08g26510D protein, PFAM = PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'nbv0.3scaffold21850_14619-31792' '(at2g20190 : 1867.0) Encodes a microtubule-associated protein that is involved in both cell division and cell expansion. It likely promotes microtubule stability.; CLIP-associated protein (CLASP); FUNCTIONS IN: binding; INVOLVED IN: mitosis, protein stabilization, cell growth; LOCATED IN: spindle microtubule, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38167 : 242.0) no description available & (reliability: 3734.0) & (original description: Putative CLASP, Description = CLIP-associated protein, PFAM = PF12348;PF12348;PF02985)' T '31.2' 'cell.division' 'nbv0.3scaffold23375_24025-28304' '(at5g13840 : 593.0) FIZZY-related 3 (FZR3); FUNCTIONS IN: signal transducer activity; INVOLVED IN: signal transduction; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: FIZZY-related 2 (TAIR:AT4G22910.1). & (gnl|cdd|35526 : 431.0) no description available & (gnl|cdd|29257 : 106.0) no description available & (reliability: 1186.0) & (original description: Putative FZR3, Description = Protein FIZZY-RELATED 3, PFAM = PF00400;PF00400)' T '31.2' 'cell.division' 'nbv0.3scaffold24576_10490-14730' '(at1g27060 : 192.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G19420.1); Has 19815 Blast hits to 6041 proteins in 472 species: Archae - 85; Bacteria - 2553; Metazoa - 7293; Fungi - 979; Plants - 2476; Viruses - 2; Other Eukaryotes - 6427 (source: NCBI BLink). & (gnl|cdd|34783 : 90.1) no description available & (gnl|cdd|36640 : 82.5) no description available & (reliability: 384.0) & (original description: Putative At1g27060, Description = Putative E3 ubiquitin-protein ligase HERC1, PFAM = PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'nbv0.3scaffold29436_13125-25559' '(at1g69400 : 287.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G49910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36254 : 264.0) no description available & (gnl|cdd|29257 : 99.7) no description available & (reliability: 574.0) & (original description: Putative BUB3.3, Description = Mitotic checkpoint protein BUB3.3, PFAM = PF00400)' T '31.2' 'cell.division' 'nbv0.3scaffold30463_8018-16843' '(at3g03790 : 557.0) ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1). & (gnl|cdd|36002 : 173.0) no description available & (gnl|cdd|29261 : 93.2) no description available & (reliability: 1114.0) & (original description: Putative At3g03790, Description = Inhibitor of Bruton tyrosine kinase, PFAM = PF12796;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'nbv0.3scaffold33552_7867-11405' '(at1g16590 : 168.0) putative translesion synthesis polymerase zeta subunit, homologous to Y-family DNA polymerases, contains BRCT domain. Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS).; REV7; CONTAINS InterPro DOMAIN/s: DNA-binding HORMA (InterPro:IPR003511); Has 307 Blast hits to 307 proteins in 122 species: Archae - 0; Bacteria - 0; Metazoa - 157; Fungi - 86; Plants - 49; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|85949 : 99.2) no description available & (gnl|cdd|38396 : 89.3) no description available & (reliability: 336.0) & (original description: Putative REV7, Description = DNA polymerase zeta processivity subunit, PFAM = PF02301)' T '31.2' 'cell.division' 'nbv0.3scaffold33845_1-3114' '(at5g48390 : 565.0) Defective in meiotic chromosome segregation. It is involved in crossover formation and involved in both male and female meiosis.; ATZIP4; FUNCTIONS IN: binding; INVOLVED IN: female meiosis, resolution of meiotic recombination intermediates, male meiosis; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Meiosis specific protein SPO22 (InterPro:IPR013940), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|40011 : 101.0) no description available & (reliability: 1130.0) & (original description: Putative ZIP4, Description = Testis-expressed sequence 11 protein, PFAM = PF08631)' T '31.2' 'cell.division' 'nbv0.3scaffold37565_651-20399' '(at5g49880 : 374.0) mitotic checkpoint family protein; CONTAINS InterPro DOMAIN/s: Mitotic checkpoint (InterPro:IPR008672); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|69099 : 181.0) no description available & (gnl|cdd|39793 : 174.0) no description available & (reliability: 748.0) & (original description: Putative MAD1, Description = AtV27-like protein, PFAM = )' T '31.2' 'cell.division' 'nbv0.3scaffold44043_1-13938' '(at5g08710 : 131.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1); Has 22297 Blast hits to 6326 proteins in 481 species: Archae - 85; Bacteria - 2816; Metazoa - 7462; Fungi - 1554; Plants - 2765; Viruses - 0; Other Eukaryotes - 7615 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative pco083336, Description = Putative E3 ubiquitin-protein ligase HERC4, PFAM = PF00415;PF00415)' T '31.2' 'cell.division' 'nbv0.3scaffold44542_1-5046' '(at3g01800 : 257.0) Ribosome recycling factor; INVOLVED IN: translational termination, translation; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosome recycling factor, bacterial-like (InterPro:IPR015998), Ribosome recycling factor (InterPro:IPR002661); BEST Arabidopsis thaliana protein match is: ribosome recycling factor, chloroplast precursor (TAIR:AT3G63190.1); Has 7776 Blast hits to 7776 proteins in 2635 species: Archae - 0; Bacteria - 5288; Metazoa - 113; Fungi - 65; Plants - 94; Viruses - 0; Other Eukaryotes - 2216 (source: NCBI BLink). & (gnl|cdd|80499 : 174.0) no description available & (gnl|cdd|39956 : 162.0) no description available & (p82231|rrfc_spiol : 88.6) Ribosome recycling factor, chloroplast precursor (Ribosome-releasing factor, chloroplast) (RRF) (CpFrr) (RRFHCP) - Spinacia oleracea (Spinach) & (reliability: 514.0) & (original description: Putative frr, Description = Ribosome-recycling factor, PFAM = PF01765)' T '31.2' 'cell.division' 'nbv0.3scaffold49492_4456-15380' '(at1g69710 : 860.0) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-related (InterPro:IPR017455), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Pleckstrin homology-type (InterPro:IPR011993), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G19420.1); Has 25088 Blast hits to 10396 proteins in 690 species: Archae - 87; Bacteria - 2712; Metazoa - 10178; Fungi - 1575; Plants - 3087; Viruses - 5; Other Eukaryotes - 7444 (source: NCBI BLink). & (gnl|cdd|34783 : 131.0) no description available & (gnl|cdd|36640 : 102.0) no description available & (reliability: 1720.0) & (original description: Putative PRAF1, Description = Regulator of chromosome condensation and FYVE zinc finger domain-containing protein, PFAM = PF13713;PF08381;PF01363;PF00415;PF00415;PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'nbv0.3scaffold56405_1-6605' '(at5g08710 : 158.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1); Has 22297 Blast hits to 6326 proteins in 481 species: Archae - 85; Bacteria - 2816; Metazoa - 7462; Fungi - 1554; Plants - 2765; Viruses - 0; Other Eukaryotes - 7615 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative At5g08710, Description = BnaC02g01020D protein, PFAM = PF00415;PF00415)' T '31.2' 'cell.division' 'nbv0.3scaffold60894_1152-11663' '(at3g55580 : 456.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT3G53830.1); Has 20178 Blast hits to 6212 proteins in 476 species: Archae - 78; Bacteria - 2696; Metazoa - 7040; Fungi - 1181; Plants - 2975; Viruses - 2; Other Eukaryotes - 6206 (source: NCBI BLink). & (gnl|cdd|34783 : 116.0) no description available & (gnl|cdd|36640 : 109.0) no description available & (reliability: 912.0) & (original description: Putative BnaC08g26510D, Description = BnaC08g26510D protein, PFAM = PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'nbv0.3scaffold63678_2031-9893' '(at2g38670 : 524.0) Encodes a mitochondrial ethanolamine-phosphate cytidylyltransferase, involved in phosphatidylethanolamine (PE) biosynthesis.; phosphorylethanolamine cytidylyltransferase 1 (PECT1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: phosphorylcholine cytidylyltransferase (TAIR:AT2G32260.1); Has 10984 Blast hits to 6001 proteins in 1666 species: Archae - 316; Bacteria - 5963; Metazoa - 682; Fungi - 448; Plants - 283; Viruses - 6; Other Eukaryotes - 3286 (source: NCBI BLink). & (gnl|cdd|38014 : 431.0) no description available & (gnl|cdd|28835 : 235.0) no description available & (reliability: 1048.0) & (original description: Putative PECT1, Description = Ethanolamine-phosphate cytidylyltransferase, PFAM = PF01467;PF01467)' T '31.2' 'cell.division' 'nbv0.3scaffold66380_1-16908' '(at5g61460 : 703.0) Encodes SMC6B (STRUCTURAL MAINTENANCE OF CHROMOSOMES 6B), a component of the SMC5/6 complex. SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage.; hypersensitive to MMS, irradiation and MMC (MIM); FUNCTIONS IN: ATP binding; INVOLVED IN: double-strand break repair, sister chromatid cohesion, chromosome segregation, response to X-ray, double-strand break repair via homologous recombination; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosomes 6A (TAIR:AT5G07660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35471 : 478.0) no description available & (gnl|cdd|73035 : 144.0) no description available & (reliability: 1406.0) & (original description: Putative Sb02g019370, Description = Putative uncharacterized protein Sb02g019370, PFAM = )' T '31.2' 'cell.division' 'nbv0.3scaffold79486_1-7262' '(at5g61460 : 233.0) Encodes SMC6B (STRUCTURAL MAINTENANCE OF CHROMOSOMES 6B), a component of the SMC5/6 complex. SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage.; hypersensitive to MMS, irradiation and MMC (MIM); FUNCTIONS IN: ATP binding; INVOLVED IN: double-strand break repair, sister chromatid cohesion, chromosome segregation, response to X-ray, double-strand break repair via homologous recombination; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosomes 6A (TAIR:AT5G07660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35471 : 167.0) no description available & (reliability: 466.0) & (original description: Putative MIM, Description = Structural maintenance of chromosomes protein 6, PFAM = )' T '31.2' 'cell.division' 'nbv0.3scaffold88736_3749-5638' '(at5g43070 : 95.9) WPP family members contains an NE targeting domain. This domain, called the WPP domain after a highly conserved Trp-Pro-Pro motif, is necessary and sufficient for NE targeting of WPP1. RNAi suppression of WPP1 resulted in reduced mitotic activity.; WPP domain protein 1 (WPP1); BEST Arabidopsis thaliana protein match is: WPP domain protein 2 (TAIR:AT1G47200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative MAF1, Description = MFP1 attachment factor 1, PFAM = PF13943)' T '31.2' 'cell.division' 'nbv0.5scaffold119_666356-670456' '(at1g16590 : 167.0) putative translesion synthesis polymerase zeta subunit, homologous to Y-family DNA polymerases, contains BRCT domain. Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS).; REV7; CONTAINS InterPro DOMAIN/s: DNA-binding HORMA (InterPro:IPR003511); Has 307 Blast hits to 307 proteins in 122 species: Archae - 0; Bacteria - 0; Metazoa - 157; Fungi - 86; Plants - 49; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|85949 : 93.4) no description available & (gnl|cdd|38396 : 83.9) no description available & (reliability: 334.0) & (original description: Putative REV7, Description = DNA polymerase zeta processivity subunit, PFAM = PF02301)' T '31.2' 'cell.division' 'nbv0.5scaffold149_729802-736910' '(at3g02510 : 575.0) Regulator of chromosome condensation (RCC1) family protein; FUNCTIONS IN: chromatin binding, Ran GTPase binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G16040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34783 : 163.0) no description available & (gnl|cdd|36640 : 105.0) no description available & (reliability: 1150.0) & (original description: Putative DR04, Description = Regulator of chromosome condensation domain-containing protein, PFAM = PF00415;PF00415;PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'nbv0.5scaffold177_173977-179106' '(at3g54670 : 293.0) Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment.; TITAN8 (TTN8); CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosome 3 (TAIR:AT5G48600.1). & (gnl|cdd|35241 : 248.0) no description available & (gnl|cdd|73034 : 223.0) no description available & (reliability: 586.0) & (original description: Putative psm1, Description = Structural maintenance of chromosomes protein, PFAM = PF02463)' T '31.2' 'cell.division' 'nbv0.5scaffold182_595009-659987' '(at5g48390 : 1028.0) Defective in meiotic chromosome segregation. It is involved in crossover formation and involved in both male and female meiosis.; ATZIP4; FUNCTIONS IN: binding; INVOLVED IN: female meiosis, resolution of meiotic recombination intermediates, male meiosis; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Meiosis specific protein SPO22 (InterPro:IPR013940), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|40011 : 323.0) no description available & (reliability: 2056.0) & (original description: Putative ZIP4, Description = TPR repeat-containing protein ZIP4, PFAM = PF08631)' T '31.2' 'cell.division' 'nbv0.5scaffold259_619495-627964' '(at3g02450 : 640.0) cell division protein ftsH, putative; FUNCTIONS IN: in 6 functions; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 8 (TAIR:AT1G06430.1); Has 43920 Blast hits to 41347 proteins in 3350 species: Archae - 1585; Bacteria - 19560; Metazoa - 4991; Fungi - 3838; Plants - 3354; Viruses - 31; Other Eukaryotes - 10561 (source: NCBI BLink). & (gnl|cdd|35950 : 377.0) no description available & (gnl|cdd|30813 : 348.0) no description available & (q5z974|ftsh_orysa : 275.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 1280.0) & (original description: Putative FTSHI3, Description = Probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic, PFAM = PF06480;PF00004)' T '31.2' 'cell.division' 'nbv0.5scaffold318_653145-664248' '(at2g38670 : 545.0) Encodes a mitochondrial ethanolamine-phosphate cytidylyltransferase, involved in phosphatidylethanolamine (PE) biosynthesis.; phosphorylethanolamine cytidylyltransferase 1 (PECT1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: phosphorylcholine cytidylyltransferase (TAIR:AT2G32260.1); Has 10984 Blast hits to 6001 proteins in 1666 species: Archae - 316; Bacteria - 5963; Metazoa - 682; Fungi - 448; Plants - 283; Viruses - 6; Other Eukaryotes - 3286 (source: NCBI BLink). & (gnl|cdd|38014 : 434.0) no description available & (gnl|cdd|28835 : 232.0) no description available & (reliability: 1090.0) & (original description: Putative pctA, Description = Ethanolamine-phosphate cytidylyltransferase, PFAM = PF01467;PF01467)' T '31.2' 'cell.division' 'nbv0.5scaffold346_734000-743437' '(at3g03790 : 975.0) ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1). & (gnl|cdd|36002 : 196.0) no description available & (gnl|cdd|34783 : 110.0) no description available & (reliability: 1950.0) & (original description: Putative At3g03790, Description = Ankyrin repeat and regulator of chromosome condensation (RCC1) domain-containing protein, PFAM = PF12796;PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'nbv0.5scaffold348_587518-598089' '(at1g22260 : 468.0) One of two nearly identical proteins (ZYP1b) identified by similarity to transverse filament (TF) proteins. These proteins are involved in chromosome synapsis during meiosis I and localize to the synaptonemal complex (SC). Single mutants have reduced fertility and double mutants (induced by RNAi) have severely reduced fertility.; ZYP1a; BEST Arabidopsis thaliana protein match is: Myosin heavy chain-related protein (TAIR:AT1G22275.1); Has 173955 Blast hits to 88084 proteins in 3391 species: Archae - 2245; Bacteria - 35093; Metazoa - 72717; Fungi - 13338; Plants - 8123; Viruses - 835; Other Eukaryotes - 41604 (source: NCBI BLink). & (gnl|cdd|35383 : 88.8) no description available & (reliability: 936.0) & (original description: Putative ZYP1A, Description = Synaptonemal complex protein 1, PFAM = )' T '31.2' 'cell.division' 'nbv0.5scaffold523_709007-713143' '(at3g26100 : 773.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT3G15430.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34783 : 122.0) no description available & (gnl|cdd|36640 : 111.0) no description available & (reliability: 1546.0) & (original description: Putative At3g26100, Description = Putative uncharacterized protein At3g26100, PFAM = PF00415;PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'nbv0.5scaffold615_139772-144306' '(at3g57090 : 166.0) Encodes a protein with similarity to yeast FIS proteins. These membrane anchored proteins bind DRP proteins and function during organelle division. FIS1B is expressed ubiquitously and appears to be involved in peroxisome division.; BIGYIN; FUNCTIONS IN: binding; INVOLVED IN: peroxisome fission, mitochondrion organization; LOCATED IN: mitochondrion, peroxisome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide repeat 11 Fission 1 protein (InterPro:IPR016543), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G12390.1); Has 347 Blast hits to 347 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 148; Plants - 92; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|38574 : 125.0) no description available & (reliability: 332.0) & (original description: Putative FIS1A, Description = Mitochondrial fission 1 protein A, PFAM = PF14852;PF14853)' T '31.2' 'cell.division' 'nbv0.5scaffold615_139916-142937' '(at3g57090 : 149.0) Encodes a protein with similarity to yeast FIS proteins. These membrane anchored proteins bind DRP proteins and function during organelle division. FIS1B is expressed ubiquitously and appears to be involved in peroxisome division.; BIGYIN; FUNCTIONS IN: binding; INVOLVED IN: peroxisome fission, mitochondrion organization; LOCATED IN: mitochondrion, peroxisome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide repeat 11 Fission 1 protein (InterPro:IPR016543), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G12390.1); Has 347 Blast hits to 347 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 148; Plants - 92; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|38574 : 100.0) no description available & (reliability: 298.0) & (original description: Putative BGY1, Description = Fission 1 protein, PFAM = PF14852;PF14853)' T '31.2' 'cell.division' 'nbv0.5scaffold914_546692-554871' '(at1g63110 : 514.0) GPI transamidase subunit PIG-U; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GPI transamidase subunit PIG-U (InterPro:IPR009600); BEST Arabidopsis thaliana protein match is: GPI transamidase subunit PIG-U (TAIR:AT1G12730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37763 : 303.0) no description available & (gnl|cdd|70208 : 199.0) no description available & (reliability: 1028.0) & (original description: Putative At1g63110, Description = GPI transamidase subunit PIG-U, PFAM = PF06728)' T '31.2' 'cell.division' 'nbv0.5scaffold1412_228926-239109' '(at3g19590 : 600.0) Encodes a protein that may have a role in the spindle assembly checkpoint.; BUB (BUDDING UNINHIBITED BY BENZYMIDAZOL) 3.1 (BUB3.1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G49910.1); Has 7284 Blast hits to 5351 proteins in 449 species: Archae - 14; Bacteria - 1710; Metazoa - 2206; Fungi - 1743; Plants - 568; Viruses - 0; Other Eukaryotes - 1043 (source: NCBI BLink). & (gnl|cdd|36254 : 453.0) no description available & (gnl|cdd|29257 : 113.0) no description available & (reliability: 1200.0) & (original description: Putative bub3, Description = Mitotic checkpoint protein BUB3, PFAM = PF00400;PF00400;PF00400)' T '31.2' 'cell.division' 'nbv0.5scaffold1515_324230-328316' '(gnl|cdd|38293 : 376.0) no description available & (at3g27280 : 360.0) Part of protein complexes that are necessary for proficient mitochondrial function or biogenesis, thereby supporting cell division and differentiation in apical tissues; prohibitin 4 (PHB4); INVOLVED IN: response to stress; LOCATED IN: mitochondrion, plasma membrane, vacuole, respiratory chain complex I, plant-type cell wall; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prohibitin (InterPro:IPR000163), Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: prohibitin 3 (TAIR:AT5G40770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|48213 : 301.0) no description available & (reliability: 720.0) & (original description: Putative PHB3, Description = Prohibitin-3, mitochondrial, PFAM = PF01145)' T '31.2' 'cell.division' 'nbv0.5scaffold2010_312615-321652' '(at5g61960 : 565.0) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML1 is a member of two sister clades of mei2-like gene family, AML1 through AML5 and belongs to the clade named ALM14. AML1 is expressed during early embryo development, particularly along embryonic axis at torpedo stage, in shoot apex (weaker expression) and in the organogenic regions of floral apices.; MEI2-like protein 1 (ML1); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like 4 (TAIR:AT5G07290.1); Has 4583 Blast hits to 4209 proteins in 289 species: Archae - 0; Bacteria - 6; Metazoa - 2486; Fungi - 644; Plants - 914; Viruses - 0; Other Eukaryotes - 533 (source: NCBI BLink). & (gnl|cdd|39859 : 229.0) no description available & (gnl|cdd|67666 : 188.0) no description available & (o65001|te1_maize : 122.0) Protein terminal ear1 - Zea mays (Maize) & (reliability: 1130.0) & (original description: Putative ML4, Description = Protein MEI2-like 4, PFAM = PF04059;PF00076;PF00076)' T '31.2' 'cell.division' 'nbv0.5scaffold2070_180207-190627' '(at3g19180 : 681.0) Encodes a chloroplast division factor located in the plastid inner envelope with its N-terminus exposed to the stroma. PARC6 influences FtsZ assembly and is required for recruitment of PDV1 during chloroplast division.; paralog of ARC6 (PARC6); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G42480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1362.0) & (original description: Putative CDP1, Description = ARC6-homolog protein, PFAM = PF13355)' T '31.2' 'cell.division' 'nbv0.5scaffold2198_278751-305968' '(at2g27170 : 493.0) Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment.; TITAN7 (TTN7); FUNCTIONS IN: ATP binding; INVOLVED IN: sister chromatid cohesion, chromosome segregation; LOCATED IN: cohesin complex, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosomes 2 (TAIR:AT5G62410.1); Has 158776 Blast hits to 77347 proteins in 3496 species: Archae - 2059; Bacteria - 28403; Metazoa - 67946; Fungi - 11949; Plants - 6773; Viruses - 706; Other Eukaryotes - 40940 (source: NCBI BLink). & (gnl|cdd|36182 : 437.0) no description available & (gnl|cdd|73031 : 267.0) no description available & (reliability: 986.0) & (original description: Putative SMC3, Description = SMC3, PFAM = PF02463)' T '31.2' 'cell.division' 'nbv0.5scaffold2244_95727-100705' '(at1g27060 : 176.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G19420.1); Has 19815 Blast hits to 6041 proteins in 472 species: Archae - 85; Bacteria - 2553; Metazoa - 7293; Fungi - 979; Plants - 2476; Viruses - 2; Other Eukaryotes - 6427 (source: NCBI BLink). & (gnl|cdd|34783 : 96.6) no description available & (gnl|cdd|36640 : 89.8) no description available & (reliability: 352.0) & (original description: Putative Os01g0777800, Description = Os01g0777800 protein, PFAM = PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'nbv0.5scaffold2299_122809-143846' '(at1g10740 : 707.0) alpha/beta-Hydrolases superfamily protein; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G23330.1). & (reliability: 1414.0) & (original description: Putative At1g23330, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = )' T '31.2' 'cell.division' 'nbv0.5scaffold2362_200428-205131' '(at4g33270 : 586.0) putative cdc20 protein (CDC20.1); CDC20.1; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT4G33260.1); Has 49595 Blast hits to 24757 proteins in 709 species: Archae - 60; Bacteria - 7548; Metazoa - 19325; Fungi - 10981; Plants - 5978; Viruses - 0; Other Eukaryotes - 5703 (source: NCBI BLink). & (gnl|cdd|35526 : 435.0) no description available & (gnl|cdd|29257 : 145.0) no description available & (reliability: 1172.0) & (original description: Putative fzy, Description = Cell division cycle protein 20, PFAM = PF12894;PF00400;PF00400)' T '31.2' 'cell.division' 'nbv0.5scaffold2380_211279-219484' '(at3g12280 : 921.0) Encodes a retinoblastoma homologue RETINOBLASTOMA-RELATED protein (RBR or RBR1). RBR controls nuclear proliferation in the female gametophyte. Also required for correct differentiation of male gametophytic cell types. Regulates stem cell maintenance in Arabidopsis roots. Involved in the determination of cell cycle arrest in G1 phase after sucrose starvation. RBR1 is also involved in regulation of imprinted genes. Together with MSI1 it represses the expression of MET1. This in turn activates expression of the imprinted genes FIS2 and FWA.; retinoblastoma-related 1 (RBR1); FUNCTIONS IN: transcription factor binding; INVOLVED IN: in 15 processes; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Retinoblastoma-associated protein, B-box (InterPro:IPR002719), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Retinoblastoma-associated protein, A-box (InterPro:IPR002720). & (gnl|cdd|36228 : 444.0) no description available & (gnl|cdd|85726 : 239.0) no description available & (reliability: 1842.0) & (original description: Putative pRB, Description = Retinoblastoma-related protein, PFAM = PF01858;PF11934)' T '31.2' 'cell.division' 'nbv0.5scaffold2649_300839-307113' '(q38774|cdc2c_antma : 542.0) Cell division control protein 2 homolog C (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (at2g38620 : 525.0) Encodes a member of a plant specific family of cyclin dependent kinases.; cyclin-dependent kinase B1;2 (CDKB1;2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B1;1 (TAIR:AT3G54180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35814 : 416.0) no description available & (gnl|cdd|29142 : 251.0) no description available & (reliability: 1050.0) & (original description: Putative CDC2C, Description = Cell division control protein 2 homolog C, PFAM = PF00069)' T '31.2' 'cell.division' 'nbv0.5scaffold3930_72873-80154' '(p30278|ccnb2_medsa : 423.0) G2/mitotic-specific cyclin-2 (B-like cyclin) (CycMs2) (Fragment) - Medicago sativa (Alfalfa) & (at2g17620 : 405.0) Cyclin B2;1 (CYCB2;1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin B2;2 (TAIR:AT4G35620.1); Has 4386 Blast hits to 4385 proteins in 373 species: Archae - 0; Bacteria - 0; Metazoa - 1994; Fungi - 552; Plants - 1134; Viruses - 37; Other Eukaryotes - 669 (source: NCBI BLink). & (gnl|cdd|35872 : 276.0) no description available & (gnl|cdd|34629 : 187.0) no description available & (reliability: 798.0) & (original description: Putative cyc1, Description = CycB2, PFAM = PF02984;PF00134)' T '31.2' 'cell.division' 'nbv0.5scaffold4089_150787-157835' '(gnl|cdd|30231 : 474.0) no description available & (at5g55280 : 466.0) Encodes one of two FtsZ proteins, tubulin-like proteins, in Arabidopsis. It is involved in chloroplast division.; homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (FTSZ1-1); FUNCTIONS IN: protein binding, structural molecule activity; INVOLVED IN: chloroplast fission, plastid fission; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cell division protein FtsZ, N-terminal (InterPro:IPR000158), Tubulin, conserved site (InterPro:IPR017975), Cell division protein FtsZ, conserved site (InterPro:IPR020805), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: Tubulin/FtsZ family protein (TAIR:AT3G52750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 932.0) & (original description: Putative ftsZ, Description = Chloroplast FtsZ-like protein, PFAM = PF00091;PF12327)' T '31.2' 'cell.division' 'nbv0.5scaffold4553_163272-167514' '(at1g49040 : 173.0) Encodes soluble protein containing N-terminal DENN domain and eight C-terminal WD-40 repeats. Involved in cytokinesis of guard mother cells and leaf epidermal cells. The overall growth and development of mutant plants is severely affected, they are smaller than wt, with defects in seedling development, leaf expansion and flower morphology which renders the mutant conditionally sterile.; STOMATAL CYTOKINESIS-DEFECTIVE 1 (SCD1); INVOLVED IN: multidimensional cell growth, guard mother cell cytokinesis, cytokinesis by cell plate formation; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), dDENN (InterPro:IPR005112), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), uDENN (InterPro:IPR005113), WD40 repeat-like-containing domain (InterPro:IPR011046), DENN (InterPro:IPR001194), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: pleiotropic regulatory locus 1 (TAIR:AT4G15900.1). & (reliability: 346.0) & (original description: Putative SCD1, Description = Stomatal cytokinesis defective 1, PFAM = )' T '31.2' 'cell.division' 'nbv0.5scaffold4856_471-12587' '(at1g19880 : 670.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1); Has 17859 Blast hits to 6314 proteins in 497 species: Archae - 78; Bacteria - 2347; Metazoa - 6181; Fungi - 1100; Plants - 2708; Viruses - 16; Other Eukaryotes - 5429 (source: NCBI BLink). & (gnl|cdd|36640 : 520.0) no description available & (gnl|cdd|34783 : 110.0) no description available & (reliability: 1340.0) & (original description: Putative BnaC07g15000D, Description = BnaC07g15000D protein, PFAM = PF00415;PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'nbv0.5scaffold5136_61012-64948' '(at3g02300 : 265.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1); Has 21089 Blast hits to 6160 proteins in 444 species: Archae - 90; Bacteria - 2769; Metazoa - 6703; Fungi - 1268; Plants - 2952; Viruses - 0; Other Eukaryotes - 7307 (source: NCBI BLink). & (reliability: 530.0) & (original description: Putative BnaC05g48330D, Description = Putative E3 ubiquitin-protein ligase HERC4, PFAM = PF00415;PF00415)' T '31.2' 'cell.division' 'nbv0.5scaffold5842_6696-71177' '(at1g80370 : 422.0) Cyclin A2;4 (CYCA2;4); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin (InterPro:IPR006670), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: CYCLIN A2;3 (TAIR:AT1G15570.1); Has 4103 Blast hits to 4099 proteins in 369 species: Archae - 0; Bacteria - 2; Metazoa - 1911; Fungi - 542; Plants - 1008; Viruses - 34; Other Eukaryotes - 606 (source: NCBI BLink). & (gnl|cdd|35873 : 303.0) no description available & (p25010|ccnal_dauca : 275.0) G2/mitotic-specific cyclin C13-1 (A-like cyclin) (Fragment) - Daucus carota (Carrot) & (gnl|cdd|34629 : 171.0) no description available & (reliability: 818.0) & (original description: Putative 1, Description = Cyclin-A1-1, PFAM = PF02984;PF00134)' T '31.2' 'cell.division' 'nbv0.5scaffold6052_45627-67423' '(at2g20190 : 1351.0) Encodes a microtubule-associated protein that is involved in both cell division and cell expansion. It likely promotes microtubule stability.; CLIP-associated protein (CLASP); FUNCTIONS IN: binding; INVOLVED IN: mitosis, protein stabilization, cell growth; LOCATED IN: spindle microtubule, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38167 : 243.0) no description available & (reliability: 2702.0) & (original description: Putative CLASP, Description = AtCLASP, PFAM = PF02985;PF12348;PF12348)' T '31.2' 'cell.division' 'nbv0.5scaffold6964_63531-69413' '(gnl|cdd|35419 : 227.0) no description available & (gnl|cdd|29142 : 198.0) no description available & (at3g50310 : 177.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 20 (MAPKKK20); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 19 (TAIR:AT5G67080.1); Has 114114 Blast hits to 112767 proteins in 3610 species: Archae - 125; Bacteria - 11707; Metazoa - 43224; Fungi - 11427; Plants - 28864; Viruses - 487; Other Eukaryotes - 18280 (source: NCBI BLink). & (p53683|cdpk2_orysa : 100.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (reliability: 326.0) & (original description: Putative PGSC0003DMG400014807, Description = Mitogen-activated protein kinase kinase kinase 21, putative, PFAM = PF00069)' T '31.2' 'cell.division' 'nbv0.5scaffold7460_29394-48141' '(at3g19180 : 702.0) Encodes a chloroplast division factor located in the plastid inner envelope with its N-terminus exposed to the stroma. PARC6 influences FtsZ assembly and is required for recruitment of PDV1 during chloroplast division.; paralog of ARC6 (PARC6); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G42480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1404.0) & (original description: Putative CDP1, Description = Plastid division protein CDP1, chloroplastic, PFAM = PF13355)' T '31.2' 'cell.division' 'niben044scf00001064ctg014_30365-35636' '(gnl|cdd|30231 : 422.0) no description available & (at5g55280 : 374.0) Encodes one of two FtsZ proteins, tubulin-like proteins, in Arabidopsis. It is involved in chloroplast division.; homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (FTSZ1-1); FUNCTIONS IN: protein binding, structural molecule activity; INVOLVED IN: chloroplast fission, plastid fission; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cell division protein FtsZ, N-terminal (InterPro:IPR000158), Tubulin, conserved site (InterPro:IPR017975), Cell division protein FtsZ, conserved site (InterPro:IPR020805), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: Tubulin/FtsZ family protein (TAIR:AT3G52750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 748.0) & (original description: Putative ftsZ, Description = Cell division protein FtsZ, PFAM = PF12327;PF00091)' T '31.2' 'cell.division' 'niben044scf00002275ctg002_15376-24138' '(at3g12280 : 917.0) Encodes a retinoblastoma homologue RETINOBLASTOMA-RELATED protein (RBR or RBR1). RBR controls nuclear proliferation in the female gametophyte. Also required for correct differentiation of male gametophytic cell types. Regulates stem cell maintenance in Arabidopsis roots. Involved in the determination of cell cycle arrest in G1 phase after sucrose starvation. RBR1 is also involved in regulation of imprinted genes. Together with MSI1 it represses the expression of MET1. This in turn activates expression of the imprinted genes FIS2 and FWA.; retinoblastoma-related 1 (RBR1); FUNCTIONS IN: transcription factor binding; INVOLVED IN: in 15 processes; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Retinoblastoma-associated protein, B-box (InterPro:IPR002719), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Retinoblastoma-associated protein, A-box (InterPro:IPR002720). & (gnl|cdd|36228 : 444.0) no description available & (gnl|cdd|85726 : 237.0) no description available & (reliability: 1834.0) & (original description: Putative pRB, Description = Retinoblastoma-related protein, PFAM = PF01858;PF11934)' T '31.2' 'cell.division' 'niben044scf00003561ctg001_9119-13300' '(at3g11450 : 592.0) DnaJ domain ;Myb-like DNA-binding domain; FUNCTIONS IN: heat shock protein binding, DNA binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), MYB-like (InterPro:IPR017877), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778); BEST Arabidopsis thaliana protein match is: DnaJ domain ;Myb-like DNA-binding domain (TAIR:AT5G06110.2); Has 60375 Blast hits to 43868 proteins in 3410 species: Archae - 228; Bacteria - 14410; Metazoa - 19184; Fungi - 5541; Plants - 3499; Viruses - 192; Other Eukaryotes - 17321 (source: NCBI BLink). & (gnl|cdd|34866 : 179.0) no description available & (gnl|cdd|35943 : 126.0) no description available & (reliability: 1184.0) & (original description: Putative GlsA, Description = Gonidialess A related factor, PFAM = PF00249;PF00226)' T '31.2' 'cell.division' 'niben044scf00004241ctg000_2862-12134' '(at1g05910 : 1281.0) cell division cycle protein 48-related / CDC48-related; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G15120.1); Has 67654 Blast hits to 42823 proteins in 3246 species: Archae - 1526; Bacteria - 25275; Metazoa - 14857; Fungi - 7046; Plants - 4267; Viruses - 557; Other Eukaryotes - 14126 (source: NCBI BLink). & (gnl|cdd|35951 : 828.0) no description available & (p54774|cdc48_soybn : 226.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (gnl|cdd|31415 : 226.0) no description available & (reliability: 2562.0) & (original description: Putative atad2, Description = ATPase family AAA domain-containing protein 2, PFAM = PF00439;PF00004)' T '31.2' 'cell.division' 'niben044scf00006003ctg002_8561-12408' '(at3g25100 : 839.0) Required for normal meiosis, may act in the last round of DNA replication prior to meiosis, sequence similar to yeast CDC45; cell division cycle 45 (CDC45); CONTAINS InterPro DOMAIN/s: CDC45-like protein (InterPro:IPR003874); Has 1810 Blast hits to 1657 proteins in 252 species: Archae - 0; Bacteria - 25; Metazoa - 666; Fungi - 449; Plants - 176; Viruses - 35; Other Eukaryotes - 459 (source: NCBI BLink). & (gnl|cdd|37686 : 559.0) no description available & (gnl|cdd|66410 : 311.0) no description available & (reliability: 1678.0) & (original description: Putative cdc45, Description = Cell division control protein 45-like protein, PFAM = PF02724)' T '31.2' 'cell.division' 'niben044scf00006091ctg001_808-5346' '(at2g27170 : 303.0) Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment.; TITAN7 (TTN7); FUNCTIONS IN: ATP binding; INVOLVED IN: sister chromatid cohesion, chromosome segregation; LOCATED IN: cohesin complex, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosomes 2 (TAIR:AT5G62410.1); Has 158776 Blast hits to 77347 proteins in 3496 species: Archae - 2059; Bacteria - 28403; Metazoa - 67946; Fungi - 11949; Plants - 6773; Viruses - 706; Other Eukaryotes - 40940 (source: NCBI BLink). & (gnl|cdd|36182 : 269.0) no description available & (gnl|cdd|73031 : 113.0) no description available & (reliability: 606.0) & (original description: Putative smc3, Description = Structural maintenance of chromosomes protein, PFAM = )' T '31.2' 'cell.division' 'niben044scf00007599ctg001_210-2986' '(gnl|cdd|35419 : 284.0) no description available & (gnl|cdd|29142 : 250.0) no description available & (at5g55090 : 237.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 15 (MAPKKK15); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 16 (TAIR:AT4G26890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 126.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 472.0) & (original description: Putative BnaC08g12350D, Description = BnaC08g12350D protein, PFAM = PF00069)' T '31.2' 'cell.division' 'niben044scf00008062ctg018_350-5282' '(at5g67260 : 318.0) Encode CYCD3;2, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development.; CYCLIN D3;2 (CYCD3;2); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle, regulation of cell proliferation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;3 (TAIR:AT3G50070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35875 : 268.0) no description available & (gnl|cdd|84548 : 97.6) no description available & (reliability: 622.0) & (original description: Putative cycD1, Description = Cyclin D3, PFAM = PF02984;PF00134)' T '31.2' 'cell.division' 'niben044scf00008313ctg001_289-6720' '(at1g27060 : 399.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G19420.1); Has 19815 Blast hits to 6041 proteins in 472 species: Archae - 85; Bacteria - 2553; Metazoa - 7293; Fungi - 979; Plants - 2476; Viruses - 2; Other Eukaryotes - 6427 (source: NCBI BLink). & (gnl|cdd|34783 : 134.0) no description available & (gnl|cdd|36640 : 106.0) no description available & (reliability: 798.0) & (original description: Putative At1g27060, Description = At1g27060, PFAM = PF00415;PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'niben044scf00008866ctg002_13003-16683' '(at5g55090 : 342.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 15 (MAPKKK15); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 16 (TAIR:AT4G26890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35419 : 288.0) no description available & (gnl|cdd|29142 : 240.0) no description available & (q5qn75|m2k1_orysa : 107.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 676.0) & (original description: Putative MAPKKK15, Description = Mitogen-activated protein kinase kinase kinase 15, PFAM = PF00069)' T '31.2' 'cell.division' 'niben044scf00009057ctg025_869-4403' '(at5g67260 : 295.0) Encode CYCD3;2, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development.; CYCLIN D3;2 (CYCD3;2); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle, regulation of cell proliferation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;3 (TAIR:AT3G50070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35875 : 263.0) no description available & (gnl|cdd|84548 : 96.1) no description available & (reliability: 554.0) & (original description: Putative cycD1, Description = Cyclin D3, PFAM = PF02984;PF00134)' T '31.2' 'cell.division' 'niben044scf00009587ctg006_4656-22501' '(at1g78770 : 872.0) anaphase promoting complex 6 (APC6); FUNCTIONS IN: binding; INVOLVED IN: regulation of DNA endoreduplication, phloem or xylem histogenesis, cell cycle; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-3 (InterPro:IPR011716), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04240.1); Has 10888 Blast hits to 7341 proteins in 968 species: Archae - 487; Bacteria - 4678; Metazoa - 2008; Fungi - 460; Plants - 439; Viruses - 0; Other Eukaryotes - 2816 (source: NCBI BLink). & (gnl|cdd|36388 : 598.0) no description available & (reliability: 1744.0) & (original description: Putative APC6, Description = Anaphase-promoting complex subunit 6, PFAM = PF13432;PF12895;PF13181;PF13424)' T '31.2' 'cell.division' 'niben044scf00010870ctg001_1-17370' '(at1g49040 : 1327.0) Encodes soluble protein containing N-terminal DENN domain and eight C-terminal WD-40 repeats. Involved in cytokinesis of guard mother cells and leaf epidermal cells. The overall growth and development of mutant plants is severely affected, they are smaller than wt, with defects in seedling development, leaf expansion and flower morphology which renders the mutant conditionally sterile.; STOMATAL CYTOKINESIS-DEFECTIVE 1 (SCD1); INVOLVED IN: multidimensional cell growth, guard mother cell cytokinesis, cytokinesis by cell plate formation; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), dDENN (InterPro:IPR005112), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), uDENN (InterPro:IPR005113), WD40 repeat-like-containing domain (InterPro:IPR011046), DENN (InterPro:IPR001194), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: pleiotropic regulatory locus 1 (TAIR:AT4G15900.1). & (gnl|cdd|37338 : 154.0) no description available & (gnl|cdd|85886 : 150.0) no description available & (reliability: 2654.0) & (original description: Putative SCD1, Description = DENN domain and WD repeat-containing protein SCD1, PFAM = PF02141;PF00400;PF00400;PF03455;PF03456)' T '31.2' 'cell.division' 'niben044scf00010979ctg006_490-13948' '(at2g20190 : 1486.0) Encodes a microtubule-associated protein that is involved in both cell division and cell expansion. It likely promotes microtubule stability.; CLIP-associated protein (CLASP); FUNCTIONS IN: binding; INVOLVED IN: mitosis, protein stabilization, cell growth; LOCATED IN: spindle microtubule, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38167 : 182.0) no description available & (reliability: 2972.0) & (original description: Putative CLASP, Description = CLIP-associated protein, PFAM = PF12348;PF12348)' T '31.2' 'cell.division' 'niben044scf00013561ctg009_50-9023' '(at3g52750 : 588.0) Nuclear gene that encodes a plastidial division protein (FtsZ2-2).; FTSZ2-2; FUNCTIONS IN: structural molecule activity, GTP binding, GTPase activity; INVOLVED IN: protein polymerization; LOCATED IN: chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cell division protein FtsZ, N-terminal (InterPro:IPR000158), Cell division protein FtsZ, conserved site (InterPro:IPR020805), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: Tubulin/FtsZ family protein (TAIR:AT2G36250.2); Has 10464 Blast hits to 10464 proteins in 3156 species: Archae - 455; Bacteria - 6195; Metazoa - 8; Fungi - 0; Plants - 153; Viruses - 0; Other Eukaryotes - 3653 (source: NCBI BLink). & (gnl|cdd|30231 : 461.0) no description available & (reliability: 1176.0) & (original description: Putative ftsZ, Description = Chloroplast FtsZ-like protein, PFAM = PF00091;PF12327)' T '31.2' 'cell.division' 'niben044scf00015368ctg012_123-6560' '(at4g21800 : 460.0) Encodes QQT2. Required for early embryo development. qqt1 mutant lines are embryo-defective. Participates in the organization of microtubules during cell division. Interacts with QQT1 (encoded by AT5G22370).; quatre-quart2 (QQT2); FUNCTIONS IN: nucleotide binding, ATP binding; INVOLVED IN: embryo development, cell division; LOCATED IN: microtubule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function, ATP binding (InterPro:IPR004130); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G12790.5); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36745 : 460.0) no description available & (gnl|cdd|86218 : 236.0) no description available & (reliability: 920.0) & (original description: Putative gpn1, Description = AAA ATPase domain-containing protein, PFAM = PF03029)' T '31.2' 'cell.division' 'niben044scf00016026ctg004_1-4765' '(p37706|rrfc_dauca : 195.0) Ribosome recycling factor, chloroplast precursor (Ribosome-releasing factor, chloroplast) (Nuclear located protein D2) (Fragment) - Daucus carota (Carrot) & (at3g63190 : 174.0) The gene encodes a chloroplast ribosome recycling factor homologue. Analysis of mutants revealed its role in the chloroplast development and eary stages of embryo development.; "ribosome recycling factor, chloroplast precursor" (RRF); FUNCTIONS IN: copper ion binding; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosome recycling factor, bacterial-like (InterPro:IPR015998), Ribosome recycling factor (InterPro:IPR002661); BEST Arabidopsis thaliana protein match is: Ribosome recycling factor (TAIR:AT3G01800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80499 : 169.0) no description available & (gnl|cdd|39956 : 132.0) no description available & (reliability: 348.0) & (original description: Putative frr, Description = RRF, PFAM = PF01765)' T '31.2' 'cell.division' 'niben044scf00016188ctg000_2446-6276' '(at5g11580 : 447.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34783 : 93.9) no description available & (reliability: 894.0) & (original description: Putative BnaA02g01070D, Description = BnaA02g01070D protein, PFAM = PF00415;PF00415)' T '31.2' 'cell.division' 'niben044scf00020049ctg001_2976-9353' '(at1g10740 : 738.0) alpha/beta-Hydrolases superfamily protein; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G23330.1). & (reliability: 1476.0) & (original description: Putative At1g23330, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = )' T '31.2' 'cell.division' 'niben044scf00022752ctg008_34362-46990' '(at1g19880 : 645.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1); Has 17859 Blast hits to 6314 proteins in 497 species: Archae - 78; Bacteria - 2347; Metazoa - 6181; Fungi - 1100; Plants - 2708; Viruses - 16; Other Eukaryotes - 5429 (source: NCBI BLink). & (gnl|cdd|36640 : 516.0) no description available & (gnl|cdd|34783 : 105.0) no description available & (reliability: 1290.0) & (original description: Putative v1g179224, Description = Predicted protein, PFAM = PF00415;PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'niben044scf00023686ctg005_19177-25929' '(p54774|cdc48_soybn : 1406.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (at5g03340 : 1380.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: protein binding, ATPase activity; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: cell division cycle 48 (TAIR:AT3G09840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35949 : 885.0) no description available & (gnl|cdd|30812 : 480.0) no description available & (reliability: 2760.0) & (original description: Putative CDC48A, Description = Cell division control protein 48 homolog A, PFAM = PF02933;PF02359;PF00004;PF00004)' T '31.2' 'cell.division' 'niben044scf00028435ctg007_207-3968' '(at1g76950 : 224.0) PRAF1; FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Zinc finger, FYVE-type (InterPro:IPR000306), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-related (InterPro:IPR017455), Pleckstrin homology-type (InterPro:IPR011993), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G42140.1); Has 21693 Blast hits to 8422 proteins in 452 species: Archae - 63; Bacteria - 2065; Metazoa - 9089; Fungi - 1093; Plants - 3056; Viruses - 5; Other Eukaryotes - 6322 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative PRAF1, Description = Putative E3 ubiquitin-protein ligase HERC1, PFAM = PF16457)' T '31.2' 'cell.division' 'niben044scf00030545ctg001_20498-24437' '(at3g25100 : 844.0) Required for normal meiosis, may act in the last round of DNA replication prior to meiosis, sequence similar to yeast CDC45; cell division cycle 45 (CDC45); CONTAINS InterPro DOMAIN/s: CDC45-like protein (InterPro:IPR003874); Has 1810 Blast hits to 1657 proteins in 252 species: Archae - 0; Bacteria - 25; Metazoa - 666; Fungi - 449; Plants - 176; Viruses - 35; Other Eukaryotes - 459 (source: NCBI BLink). & (gnl|cdd|37686 : 559.0) no description available & (gnl|cdd|66410 : 306.0) no description available & (reliability: 1688.0) & (original description: Putative CDC45, Description = CDC45 (Cell division cycle 45)-like protein, PFAM = PF02724)' T '31.2' 'cell.division' 'niben044scf00030654ctg003_24329-43229' '(at2g34780 : 149.0) Encodes a novel protein of unknown function that is essential for embryonic development. Severe loss of function alleles are embryo lethal. Analysis of a partial loss of function allele indicates a role for EMB1611 in regulation of endoreduplication and maintenance of meristem cell fate. It appears to be required for maintaining the CLV-WUS regulatory pathway.; MATERNAL EFFECT EMBRYO ARREST 22 (MEE22); INVOLVED IN: negative regulation of DNA endoreduplication, meristem structural organization, embryo development ending in seed dormancy, maintenance of meristem identity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. & (gnl|cdd|35383 : 86.4) no description available & (reliability: 298.0) & (original description: Putative , Description = Putative nucleoprotein TPR-like, PFAM = )' T '31.2' 'cell.division' 'niben044scf00032287ctg002_1-4689' '(at4g33270 : 501.0) putative cdc20 protein (CDC20.1); CDC20.1; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT4G33260.1); Has 49595 Blast hits to 24757 proteins in 709 species: Archae - 60; Bacteria - 7548; Metazoa - 19325; Fungi - 10981; Plants - 5978; Viruses - 0; Other Eukaryotes - 5703 (source: NCBI BLink). & (gnl|cdd|35526 : 372.0) no description available & (gnl|cdd|29257 : 111.0) no description available & (reliability: 1002.0) & (original description: Putative fzy, Description = Anaphase-promoting complex subunit cdc20, PFAM = PF12894;PF00400)' T '31.2' 'cell.division' 'niben044scf00032307ctg001_1-4671' '(at3g19180 : 677.0) Encodes a chloroplast division factor located in the plastid inner envelope with its N-terminus exposed to the stroma. PARC6 influences FtsZ assembly and is required for recruitment of PDV1 during chloroplast division.; paralog of ARC6 (PARC6); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G42480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1354.0) & (original description: Putative CDP1, Description = Plastid division protein CDP1, chloroplastic, PFAM = PF13355)' T '31.2' 'cell.division' 'niben044scf00032601ctg007_8040-17231' '(at3g03790 : 1085.0) ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1). & (gnl|cdd|36002 : 198.0) no description available & (gnl|cdd|34783 : 110.0) no description available & (reliability: 2170.0) & (original description: Putative At3g03790, Description = Ankyrin repeat and regulator of chromosome condensation (RCC1) domain-containing protein, PFAM = PF00415;PF00415;PF00415;PF00415;PF12796)' T '31.2' 'cell.division' 'niben044scf00037812ctg000_10973-14771' '(at4g34160 : 264.0) encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1.; CYCLIN D3;1 (CYCD3;1); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;2 (TAIR:AT5G67260.1); Has 3155 Blast hits to 3153 proteins in 309 species: Archae - 0; Bacteria - 0; Metazoa - 1504; Fungi - 362; Plants - 1012; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (gnl|cdd|35875 : 243.0) no description available & (gnl|cdd|84548 : 101.0) no description available & (reliability: 528.0) & (original description: Putative cycD3, Description = Cyclin D3-1, PFAM = PF00134;PF02984)' T '31.2' 'cell.division' 'niben044scf00037910ctg005_2047-3994' '(at5g07660 : 153.0) Encodes SMC6A (STRUCTURAL MAINTENANCE OF CHROMOSOMES 6A), a component of the SMC5/6 complex. SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage.; structural maintenance of chromosomes 6A (SMC6A); FUNCTIONS IN: two-component sensor activity, ATP binding; INVOLVED IN: sister chromatid cohesion, chromosome segregation, response to X-ray, double-strand break repair via homologous recombination; LOCATED IN: chromosome, nucleus, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G61460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35471 : 124.0) no description available & (reliability: 306.0) & (original description: Putative MIM, Description = Structural maintenance of chromosomes protein 6, PFAM = )' T '31.2' 'cell.division' 'niben044scf00039897ctg010_987-6075' '(at3g57090 : 210.0) Encodes a protein with similarity to yeast FIS proteins. These membrane anchored proteins bind DRP proteins and function during organelle division. FIS1B is expressed ubiquitously and appears to be involved in peroxisome division.; BIGYIN; FUNCTIONS IN: binding; INVOLVED IN: peroxisome fission, mitochondrion organization; LOCATED IN: mitochondrion, peroxisome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide repeat 11 Fission 1 protein (InterPro:IPR016543), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G12390.1); Has 347 Blast hits to 347 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 148; Plants - 92; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|38574 : 153.0) no description available & (reliability: 420.0) & (original description: Putative FIS1A, Description = Mitochondrial fission 1 protein A, PFAM = PF14852;PF14853)' T '31.2' 'cell.division' 'niben044scf00040616ctg005_1-7293' '(at1g63110 : 353.0) GPI transamidase subunit PIG-U; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GPI transamidase subunit PIG-U (InterPro:IPR009600); BEST Arabidopsis thaliana protein match is: GPI transamidase subunit PIG-U (TAIR:AT1G12730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37763 : 186.0) no description available & (reliability: 706.0) & (original description: Putative Os01g0870201, Description = Os01g0870201 protein, PFAM = PF06728)' T '31.2' 'cell.division' 'niben044scf00047104ctg001_1267-5367' '(at1g16590 : 167.0) putative translesion synthesis polymerase zeta subunit, homologous to Y-family DNA polymerases, contains BRCT domain. Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS).; REV7; CONTAINS InterPro DOMAIN/s: DNA-binding HORMA (InterPro:IPR003511); Has 307 Blast hits to 307 proteins in 122 species: Archae - 0; Bacteria - 0; Metazoa - 157; Fungi - 86; Plants - 49; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|85949 : 93.4) no description available & (gnl|cdd|38396 : 83.9) no description available & (reliability: 334.0) & (original description: Putative REV7, Description = DNA polymerase zeta processivity subunit, PFAM = PF02301)' T '31.2' 'cell.division' 'niben044scf00050344ctg004_364-12741' '(at5g12350 : 831.0) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Pleckstrin homology-type (InterPro:IPR011993), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G19420.1); Has 23773 Blast hits to 8858 proteins in 456 species: Archae - 73; Bacteria - 2346; Metazoa - 9625; Fungi - 1299; Plants - 3027; Viruses - 3; Other Eukaryotes - 7400 (source: NCBI BLink). & (gnl|cdd|34783 : 135.0) no description available & (gnl|cdd|36640 : 114.0) no description available & (reliability: 1662.0) & (original description: Putative At5g12350, Description = Regulator of chromosome condensation-like protein with FYVE zinc finger domain-containing protein, PFAM = PF01363;PF00415;PF00415;PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'niben101scf00017_483531-513115' '(at5g08710 : 437.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1); Has 22297 Blast hits to 6326 proteins in 481 species: Archae - 85; Bacteria - 2816; Metazoa - 7462; Fungi - 1554; Plants - 2765; Viruses - 0; Other Eukaryotes - 7615 (source: NCBI BLink). & (gnl|cdd|34783 : 122.0) no description available & (gnl|cdd|36640 : 116.0) no description available & (reliability: 874.0) & (original description: Putative At5g08710, Description = Putative UVB-resistance protein UVR8, PFAM = PF00415;PF00415;PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'niben101scf00017_483555-513783' '(at5g08710 : 466.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1); Has 22297 Blast hits to 6326 proteins in 481 species: Archae - 85; Bacteria - 2816; Metazoa - 7462; Fungi - 1554; Plants - 2765; Viruses - 0; Other Eukaryotes - 7615 (source: NCBI BLink). & (gnl|cdd|34783 : 127.0) no description available & (gnl|cdd|36640 : 117.0) no description available & (reliability: 932.0) & (original description: Putative At5g08710, Description = Putative UVB-resistance protein UVR8, PFAM = PF00415;PF00415;PF00415;PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'niben101scf00107_254326-259258' '(at4g34160 : 312.0) encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1.; CYCLIN D3;1 (CYCD3;1); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;2 (TAIR:AT5G67260.1); Has 3155 Blast hits to 3153 proteins in 309 species: Archae - 0; Bacteria - 0; Metazoa - 1504; Fungi - 362; Plants - 1012; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (gnl|cdd|35875 : 268.0) no description available & (gnl|cdd|84548 : 97.6) no description available & (reliability: 624.0) & (original description: Putative cycD1, Description = Cyclin D3, PFAM = PF00134;PF02984)' T '31.2' 'cell.division' 'niben101scf00130_343002-352893' '(at5g25380 : 424.0) core cell cycle genes; cyclin a2;1 (CYCA2;1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle, DNA endoreduplication; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: mitotic-like cyclin 3B from Arabidopsis (TAIR:AT5G11300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35873 : 309.0) no description available & (p25010|ccnal_dauca : 280.0) G2/mitotic-specific cyclin C13-1 (A-like cyclin) (Fragment) - Daucus carota (Carrot) & (gnl|cdd|34629 : 170.0) no description available & (reliability: 848.0) & (original description: Putative cycA3, Description = Cyclin-A2-1, PFAM = PF00134;PF02984)' T '31.2' 'cell.division' 'niben101scf00152_1829228-1851009' '(at1g19880 : 678.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1); Has 17859 Blast hits to 6314 proteins in 497 species: Archae - 78; Bacteria - 2347; Metazoa - 6181; Fungi - 1100; Plants - 2708; Viruses - 16; Other Eukaryotes - 5429 (source: NCBI BLink). & (gnl|cdd|36640 : 532.0) no description available & (gnl|cdd|34783 : 113.0) no description available & (reliability: 1356.0) & (original description: Putative RCC2, Description = Protein RCC2, PFAM = PF00415;PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'niben101scf00199_630896-648768' '(at2g38670 : 645.0) Encodes a mitochondrial ethanolamine-phosphate cytidylyltransferase, involved in phosphatidylethanolamine (PE) biosynthesis.; phosphorylethanolamine cytidylyltransferase 1 (PECT1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: phosphorylcholine cytidylyltransferase (TAIR:AT2G32260.1); Has 10984 Blast hits to 6001 proteins in 1666 species: Archae - 316; Bacteria - 5963; Metazoa - 682; Fungi - 448; Plants - 283; Viruses - 6; Other Eukaryotes - 3286 (source: NCBI BLink). & (gnl|cdd|38014 : 474.0) no description available & (gnl|cdd|28836 : 227.0) no description available & (reliability: 1290.0) & (original description: Putative PECT1, Description = Ethanolamine-phosphate cytidylyltransferase, PFAM = PF01467;PF01467)' T '31.2' 'cell.division' 'niben101scf00290_250099-262377' '(at5g19420 : 1472.0) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-related (InterPro:IPR017455), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Pleckstrin homology-type (InterPro:IPR011993), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G12350.1). & (gnl|cdd|34783 : 127.0) no description available & (gnl|cdd|36640 : 121.0) no description available & (reliability: 2944.0) & (original description: Putative PRAF1, Description = Regulator of chromosome condensation and FYVE zinc finger domain-containing protein, PFAM = PF13713;PF00415;PF00415;PF00415;PF00415;PF00415;PF00415;PF16627;PF16457;PF08381;PF01363)' T '31.2' 'cell.division' 'niben101scf00299_74367-79233' '(at3g57090 : 193.0) Encodes a protein with similarity to yeast FIS proteins. These membrane anchored proteins bind DRP proteins and function during organelle division. FIS1B is expressed ubiquitously and appears to be involved in peroxisome division.; BIGYIN; FUNCTIONS IN: binding; INVOLVED IN: peroxisome fission, mitochondrion organization; LOCATED IN: mitochondrion, peroxisome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide repeat 11 Fission 1 protein (InterPro:IPR016543), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G12390.1); Has 347 Blast hits to 347 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 148; Plants - 92; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|38574 : 144.0) no description available & (reliability: 386.0) & (original description: Putative FIS1A, Description = Mitochondrial fission 1 protein A, PFAM = PF14852;PF14853)' T '31.2' 'cell.division' 'niben101scf00371_466885-474988' '(at3g15430 : 707.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT3G26100.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34783 : 113.0) no description available & (gnl|cdd|36002 : 108.0) no description available & (reliability: 1414.0) & (original description: Putative BnaA05g24110D, Description = BnaA05g24110D protein, PFAM = PF00415;PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'niben101scf00381_651490-697268' '(at2g17510 : 1456.0) EMBRYO DEFECTIVE 2763 (EMB2763); FUNCTIONS IN: ribonuclease activity, RNA binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide binding protein, PINc (InterPro:IPR006596), Ribonuclease II/R (InterPro:IPR001900); BEST Arabidopsis thaliana protein match is: Ribonuclease II/R family protein (TAIR:AT1G77680.1). & (gnl|cdd|37313 : 866.0) no description available & (gnl|cdd|30903 : 423.0) no description available & (reliability: 2912.0) & (original description: Putative RRP44A, Description = Exosome complex exonuclease RRP44 homolog A, PFAM = PF17215;PF00773;PF13638;PF17216)' T '31.2' 'cell.division' 'niben101scf00448_491295-494329' '(at5g55090 : 318.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 15 (MAPKKK15); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 16 (TAIR:AT4G26890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35419 : 288.0) no description available & (gnl|cdd|29142 : 242.0) no description available & (q5qn75|m2k1_orysa : 117.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 596.0) & (original description: Putative BnaC04g12300D, Description = BnaC04g12300D protein, PFAM = PF00069)' T '31.2' 'cell.division' 'niben101scf00520_1239411-1242655' '(at5g55090 : 320.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 15 (MAPKKK15); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 16 (TAIR:AT4G26890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35419 : 284.0) no description available & (gnl|cdd|29142 : 238.0) no description available & (q5qn75|m2k1_orysa : 110.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 602.0) & (original description: Putative MAPKKK17, Description = Mitogen-activated protein kinase kinase kinase 17, PFAM = PF00069)' T '31.2' 'cell.division' 'niben101scf00551_707148-714442' '(at1g49040 : 202.0) Encodes soluble protein containing N-terminal DENN domain and eight C-terminal WD-40 repeats. Involved in cytokinesis of guard mother cells and leaf epidermal cells. The overall growth and development of mutant plants is severely affected, they are smaller than wt, with defects in seedling development, leaf expansion and flower morphology which renders the mutant conditionally sterile.; STOMATAL CYTOKINESIS-DEFECTIVE 1 (SCD1); INVOLVED IN: multidimensional cell growth, guard mother cell cytokinesis, cytokinesis by cell plate formation; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), dDENN (InterPro:IPR005112), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), uDENN (InterPro:IPR005113), WD40 repeat-like-containing domain (InterPro:IPR011046), DENN (InterPro:IPR001194), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: pleiotropic regulatory locus 1 (TAIR:AT4G15900.1). & (reliability: 404.0) & (original description: Putative SCD1, Description = Stomatal cytokinesis defective 1, PFAM = )' T '31.2' 'cell.division' 'niben101scf00585_432288-444466' '(p30278|ccnb2_medsa : 425.0) G2/mitotic-specific cyclin-2 (B-like cyclin) (CycMs2) (Fragment) - Medicago sativa (Alfalfa) & (at1g20610 : 415.0) Cyclin B2;3 (CYCB2;3); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN B2;4 (TAIR:AT1G76310.1); Has 4405 Blast hits to 4396 proteins in 374 species: Archae - 0; Bacteria - 7; Metazoa - 2039; Fungi - 549; Plants - 1150; Viruses - 30; Other Eukaryotes - 630 (source: NCBI BLink). & (gnl|cdd|35872 : 272.0) no description available & (gnl|cdd|34629 : 186.0) no description available & (reliability: 810.0) & (original description: Putative cyc1, Description = CycB2, PFAM = PF02984;PF00134)' T '31.2' 'cell.division' 'niben101scf00650_160060-166810' '(at1g10740 : 736.0) alpha/beta-Hydrolases superfamily protein; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G23330.1). & (reliability: 1472.0) & (original description: Putative At1g23330, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = )' T '31.2' 'cell.division' 'niben101scf00741_24373-32552' '(at1g63110 : 502.0) GPI transamidase subunit PIG-U; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GPI transamidase subunit PIG-U (InterPro:IPR009600); BEST Arabidopsis thaliana protein match is: GPI transamidase subunit PIG-U (TAIR:AT1G12730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37763 : 294.0) no description available & (gnl|cdd|70208 : 144.0) no description available & (reliability: 1004.0) & (original description: Putative At1g63110, Description = GPI transamidase subunit PIG-U, PFAM = PF06728)' T '31.2' 'cell.division' 'niben101scf00914_1430-13000' '(at2g38670 : 508.0) Encodes a mitochondrial ethanolamine-phosphate cytidylyltransferase, involved in phosphatidylethanolamine (PE) biosynthesis.; phosphorylethanolamine cytidylyltransferase 1 (PECT1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: phosphorylcholine cytidylyltransferase (TAIR:AT2G32260.1); Has 10984 Blast hits to 6001 proteins in 1666 species: Archae - 316; Bacteria - 5963; Metazoa - 682; Fungi - 448; Plants - 283; Viruses - 6; Other Eukaryotes - 3286 (source: NCBI BLink). & (gnl|cdd|38014 : 414.0) no description available & (gnl|cdd|28836 : 221.0) no description available & (reliability: 1016.0) & (original description: Putative PECT1, Description = Ethanolamine-phosphate cytidylyltransferase, PFAM = PF01467;PF01467)' T '31.2' 'cell.division' 'niben101scf00922_77811-90136' '(at2g32900 : 774.0) homologous to Drosophila ZW10, a centromere/kinetochore protein involved in chromosome segregation; ATZW10; INVOLVED IN: chromosome segregation; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Centromere/kinetochore protein Zw10 (InterPro:IPR009361); Has 272 Blast hits to 258 proteins in 128 species: Archae - 0; Bacteria - 2; Metazoa - 125; Fungi - 86; Plants - 38; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|37374 : 397.0) no description available & (gnl|cdd|69753 : 358.0) no description available & (reliability: 1548.0) & (original description: Putative ZW10, Description = Centromere/kinetochore protein zw10 homolog, PFAM = PF06248)' T '31.2' 'cell.division' 'niben101scf00980_622614-627148' '(at3g57090 : 194.0) Encodes a protein with similarity to yeast FIS proteins. These membrane anchored proteins bind DRP proteins and function during organelle division. FIS1B is expressed ubiquitously and appears to be involved in peroxisome division.; BIGYIN; FUNCTIONS IN: binding; INVOLVED IN: peroxisome fission, mitochondrion organization; LOCATED IN: mitochondrion, peroxisome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide repeat 11 Fission 1 protein (InterPro:IPR016543), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G12390.1); Has 347 Blast hits to 347 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 148; Plants - 92; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|38574 : 136.0) no description available & (reliability: 388.0) & (original description: Putative FIS1A, Description = Mitochondrial fission 1 protein A, PFAM = PF14853;PF14852)' T '31.2' 'cell.division' 'niben101scf01013_394038-403963' '(at4g14368 : 1196.0) Regulator of chromosome condensation (RCC1) family protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Pleckstrin homology-type (InterPro:IPR011993), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT3G23270.1); Has 23075 Blast hits to 9219 proteins in 606 species: Archae - 56; Bacteria - 2851; Metazoa - 9367; Fungi - 1087; Plants - 2969; Viruses - 60; Other Eukaryotes - 6685 (source: NCBI BLink). & (gnl|cdd|34783 : 133.0) no description available & (gnl|cdd|36640 : 111.0) no description available & (reliability: 2390.0) & (original description: Putative PRAF1, Description = Regulator of chromosome condensation and FYVE zinc finger domain-containing protein, PFAM = PF13713;PF08381;PF01363;PF16457;PF00415;PF00415;PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'niben101scf01063_926966-931134' '(at4g33270 : 725.0) putative cdc20 protein (CDC20.1); CDC20.1; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT4G33260.1); Has 49595 Blast hits to 24757 proteins in 709 species: Archae - 60; Bacteria - 7548; Metazoa - 19325; Fungi - 10981; Plants - 5978; Viruses - 0; Other Eukaryotes - 5703 (source: NCBI BLink). & (gnl|cdd|35526 : 465.0) no description available & (gnl|cdd|29257 : 147.0) no description available & (reliability: 1450.0) & (original description: Putative fzy, Description = Cell division cycle protein 20, PFAM = PF00400;PF00400;PF00400;PF12894)' T '31.2' 'cell.division' 'niben101scf01073_815375-819386' '(at3g25980 : 348.0) Encodes MAD2 (MITOTIC ARREST-DEFICIENT 2). May have the spindle assembly checkpoint protein functions conserved from yeast to humans.; MITOTIC ARREST-DEFICIENT 2 (MAD2); CONTAINS InterPro DOMAIN/s: DNA-binding HORMA (InterPro:IPR003511). & (q9xfh3|mad2_maize : 343.0) Mitotic spindle checkpoint protein MAD2 - Zea mays (Maize) & (gnl|cdd|38495 : 293.0) no description available & (gnl|cdd|85949 : 178.0) no description available & (reliability: 696.0) & (original description: Putative MAD2, Description = Mitotic spindle checkpoint protein MAD2, PFAM = PF02301)' T '31.2' 'cell.division' 'niben101scf01090_451828-482032' '(at3g54670 : 1211.0) Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment.; TITAN8 (TTN8); CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosome 3 (TAIR:AT5G48600.1). & (gnl|cdd|35241 : 917.0) no description available & (gnl|cdd|31389 : 441.0) no description available & (reliability: 2422.0) & (original description: Putative SMC1, Description = Structural maintenance of chromosomes protein 1, PFAM = PF02463;PF06470)' T '31.2' 'cell.division' 'niben101scf01145_313186-317968' '(at4g33270 : 580.0) putative cdc20 protein (CDC20.1); CDC20.1; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT4G33260.1); Has 49595 Blast hits to 24757 proteins in 709 species: Archae - 60; Bacteria - 7548; Metazoa - 19325; Fungi - 10981; Plants - 5978; Viruses - 0; Other Eukaryotes - 5703 (source: NCBI BLink). & (gnl|cdd|35526 : 438.0) no description available & (gnl|cdd|29257 : 142.0) no description available & (reliability: 1160.0) & (original description: Putative CDC20, Description = Cell division cycle protein 20 homolog, PFAM = PF00400;PF00400;PF12894)' T '31.2' 'cell.division' 'niben101scf01328_90294-95385' '(at5g48330 : 468.0) Regulator of chromosome condensation (RCC1) family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1); Has 20346 Blast hits to 5903 proteins in 456 species: Archae - 102; Bacteria - 2678; Metazoa - 6920; Fungi - 1068; Plants - 2784; Viruses - 2; Other Eukaryotes - 6792 (source: NCBI BLink). & (gnl|cdd|34783 : 128.0) no description available & (gnl|cdd|36640 : 92.1) no description available & (reliability: 936.0) & (original description: Putative At5g48330, Description = Putative regulator of chromosome condensation (Cell cycle regulatory protein), PFAM = PF13540;PF00415;PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'niben101scf01376_316215-319458' '(at1g16590 : 261.0) putative translesion synthesis polymerase zeta subunit, homologous to Y-family DNA polymerases, contains BRCT domain. Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS).; REV7; CONTAINS InterPro DOMAIN/s: DNA-binding HORMA (InterPro:IPR003511); Has 307 Blast hits to 307 proteins in 122 species: Archae - 0; Bacteria - 0; Metazoa - 157; Fungi - 86; Plants - 49; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|85949 : 99.6) no description available & (gnl|cdd|38396 : 97.4) no description available & (reliability: 522.0) & (original description: Putative REV7, Description = DNA polymerase zeta processivity subunit, PFAM = PF02301)' T '31.2' 'cell.division' 'niben101scf01427_112459-116891' '(p54774|cdc48_soybn : 1228.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (at5g03340 : 1220.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: protein binding, ATPase activity; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: cell division cycle 48 (TAIR:AT3G09840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35949 : 837.0) no description available & (gnl|cdd|30812 : 465.0) no description available & (reliability: 2440.0) & (original description: Putative cdcD, Description = Transitional endoplasmic reticulum ATPase, PFAM = PF02359;PF02933;PF00004;PF00004)' T '31.2' 'cell.division' 'niben101scf01611_366099-371680' '(at5g11580 : 583.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34783 : 130.0) no description available & (gnl|cdd|36640 : 84.4) no description available & (reliability: 1166.0) & (original description: Putative Sb03g033330, Description = Putative uncharacterized protein Sb03g033330, PFAM = PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'niben101scf01871_40333-43501' '(at5g43070 : 92.4) WPP family members contains an NE targeting domain. This domain, called the WPP domain after a highly conserved Trp-Pro-Pro motif, is necessary and sufficient for NE targeting of WPP1. RNAi suppression of WPP1 resulted in reduced mitotic activity.; WPP domain protein 1 (WPP1); BEST Arabidopsis thaliana protein match is: WPP domain protein 2 (TAIR:AT1G47200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative MAF1, Description = MFP1 attachment factor 1, PFAM = PF13943)' T '31.2' 'cell.division' 'niben101scf02041_216041-221097' '(at1g76310 : 423.0) core cell cycle genes; CYCLIN B2;4 (CYCB2;4); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin B2;3 (TAIR:AT1G20610.1); Has 4261 Blast hits to 4252 proteins in 371 species: Archae - 0; Bacteria - 0; Metazoa - 1989; Fungi - 541; Plants - 1112; Viruses - 30; Other Eukaryotes - 589 (source: NCBI BLink). & (p30278|ccnb2_medsa : 408.0) G2/mitotic-specific cyclin-2 (B-like cyclin) (CycMs2) (Fragment) - Medicago sativa (Alfalfa) & (gnl|cdd|35872 : 275.0) no description available & (gnl|cdd|34629 : 191.0) no description available & (reliability: 768.0) & (original description: Putative cycB1, Description = CycB2, PFAM = PF00134;PF02984)' T '31.2' 'cell.division' 'niben101scf02049_366629-387314' '(at1g78770 : 875.0) anaphase promoting complex 6 (APC6); FUNCTIONS IN: binding; INVOLVED IN: regulation of DNA endoreduplication, phloem or xylem histogenesis, cell cycle; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-3 (InterPro:IPR011716), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04240.1); Has 10888 Blast hits to 7341 proteins in 968 species: Archae - 487; Bacteria - 4678; Metazoa - 2008; Fungi - 460; Plants - 439; Viruses - 0; Other Eukaryotes - 2816 (source: NCBI BLink). & (gnl|cdd|36388 : 596.0) no description available & (reliability: 1750.0) & (original description: Putative APC6, Description = Anaphase-promoting complex subunit 6, PFAM = PF13432;PF13424;PF13374;PF13181;PF12895)' T '31.2' 'cell.division' 'niben101scf02139_235242-242928' '(p54774|cdc48_soybn : 1444.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (at5g03340 : 1425.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: protein binding, ATPase activity; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: cell division cycle 48 (TAIR:AT3G09840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35949 : 890.0) no description available & (gnl|cdd|30812 : 483.0) no description available & (reliability: 2850.0) & (original description: Putative CDC48A, Description = Cell division control protein 48 homolog A, PFAM = PF00004;PF00004;PF02933;PF02359)' T '31.2' 'cell.division' 'niben101scf02249_316601-320543' '(at4g33270 : 688.0) putative cdc20 protein (CDC20.1); CDC20.1; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT4G33260.1); Has 49595 Blast hits to 24757 proteins in 709 species: Archae - 60; Bacteria - 7548; Metazoa - 19325; Fungi - 10981; Plants - 5978; Viruses - 0; Other Eukaryotes - 5703 (source: NCBI BLink). & (gnl|cdd|35526 : 459.0) no description available & (gnl|cdd|29257 : 146.0) no description available & (reliability: 1376.0) & (original description: Putative fzy, Description = Cell division cycle protein 20, PFAM = PF12894;PF00400;PF00400;PF00400)' T '31.2' 'cell.division' 'niben101scf02439_114448-118575' '(at1g27060 : 121.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G19420.1); Has 19815 Blast hits to 6041 proteins in 472 species: Archae - 85; Bacteria - 2553; Metazoa - 7293; Fungi - 979; Plants - 2476; Viruses - 2; Other Eukaryotes - 6427 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative At1g27060, Description = Putative E3 ubiquitin-protein ligase HERC1, PFAM = PF00415;PF00415)' T '31.2' 'cell.division' 'niben101scf02445_1062283-1065769' '(at4g34160 : 254.0) encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1.; CYCLIN D3;1 (CYCD3;1); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;2 (TAIR:AT5G67260.1); Has 3155 Blast hits to 3153 proteins in 309 species: Archae - 0; Bacteria - 0; Metazoa - 1504; Fungi - 362; Plants - 1012; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (gnl|cdd|35875 : 242.0) no description available & (gnl|cdd|84548 : 101.0) no description available & (reliability: 508.0) & (original description: Putative cycD3, Description = Cyclin D3-1, PFAM = PF00134;PF02984)' T '31.2' 'cell.division' 'niben101scf02659_310477-319749' '(at1g05910 : 1323.0) cell division cycle protein 48-related / CDC48-related; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G15120.1); Has 67654 Blast hits to 42823 proteins in 3246 species: Archae - 1526; Bacteria - 25275; Metazoa - 14857; Fungi - 7046; Plants - 4267; Viruses - 557; Other Eukaryotes - 14126 (source: NCBI BLink). & (gnl|cdd|35951 : 830.0) no description available & (gnl|cdd|31415 : 229.0) no description available & (p54774|cdc48_soybn : 224.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 2646.0) & (original description: Putative atad2, Description = ATPase family AAA domain-containing protein 2, PFAM = PF00439;PF00004)' T '31.2' 'cell.division' 'niben101scf02746_772007-780482' '(at3g12280 : 926.0) Encodes a retinoblastoma homologue RETINOBLASTOMA-RELATED protein (RBR or RBR1). RBR controls nuclear proliferation in the female gametophyte. Also required for correct differentiation of male gametophytic cell types. Regulates stem cell maintenance in Arabidopsis roots. Involved in the determination of cell cycle arrest in G1 phase after sucrose starvation. RBR1 is also involved in regulation of imprinted genes. Together with MSI1 it represses the expression of MET1. This in turn activates expression of the imprinted genes FIS2 and FWA.; retinoblastoma-related 1 (RBR1); FUNCTIONS IN: transcription factor binding; INVOLVED IN: in 15 processes; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Retinoblastoma-associated protein, B-box (InterPro:IPR002719), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Retinoblastoma-associated protein, A-box (InterPro:IPR002720). & (gnl|cdd|36228 : 452.0) no description available & (gnl|cdd|85726 : 241.0) no description available & (reliability: 1852.0) & (original description: Putative pRB, Description = Retinoblastoma-related protein, PFAM = PF01858;PF11934)' T '31.2' 'cell.division' 'niben101scf02832_129053-132603' '(at5g67260 : 295.0) Encode CYCD3;2, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development.; CYCLIN D3;2 (CYCD3;2); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle, regulation of cell proliferation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;3 (TAIR:AT3G50070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35875 : 264.0) no description available & (gnl|cdd|84548 : 99.2) no description available & (reliability: 572.0) & (original description: Putative cycD1, Description = Cyclin D3, PFAM = PF00134;PF02984)' T '31.2' 'cell.division' 'niben101scf02917_154473-165011' '(at3g52750 : 595.0) Nuclear gene that encodes a plastidial division protein (FtsZ2-2).; FTSZ2-2; FUNCTIONS IN: structural molecule activity, GTP binding, GTPase activity; INVOLVED IN: protein polymerization; LOCATED IN: chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cell division protein FtsZ, N-terminal (InterPro:IPR000158), Cell division protein FtsZ, conserved site (InterPro:IPR020805), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: Tubulin/FtsZ family protein (TAIR:AT2G36250.2); Has 10464 Blast hits to 10464 proteins in 3156 species: Archae - 455; Bacteria - 6195; Metazoa - 8; Fungi - 0; Plants - 153; Viruses - 0; Other Eukaryotes - 3653 (source: NCBI BLink). & (gnl|cdd|30231 : 461.0) no description available & (reliability: 1190.0) & (original description: Putative ftsZ, Description = Chloroplast FtsZ-like protein, PFAM = PF12327;PF00091)' T '31.2' 'cell.division' 'niben101scf02949_147590-151714' '(at3g26100 : 773.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT3G15430.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34783 : 126.0) no description available & (gnl|cdd|36640 : 110.0) no description available & (reliability: 1546.0) & (original description: Putative At3g26100, Description = Putative uncharacterized protein At3g26100, PFAM = PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'niben101scf03076_147022-168785' '(at2g35110 : 2163.0) Component of the WAVE protein complex which act as activators of ARP2/3 complex involved in actin nucleation. Required for trichome morphogenesis. Mutant displays distorted trichomes, a phenotype that can be phenocopied by treatment of WT plants with actin-interacting drugs.; GNARLED (GRL); CONTAINS InterPro DOMAIN/s: Nck-associated protein 1 (InterPro:IPR019137); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6zbh9|nckp1_orysa : 1929.0) Probable protein NAP1 (Nck-associated protein 1) (P125Nap1) (NAP of plants) - Oryza sativa (Rice) & (gnl|cdd|37128 : 1036.0) no description available & (reliability: 4326.0) & (original description: Putative NAP1, Description = Protein NAP1, PFAM = PF09735)' T '31.2' 'cell.division' 'niben101scf03154_158278-207786' '(at5g15920 : 1241.0) Encodes SMC5 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 5), a component of the SMC5/6 complex. SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage.; structural maintenance of chromosomes 5 (SMC5); FUNCTIONS IN: ATP binding; INVOLVED IN: sister chromatid cohesion, chromosome segregation; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G61460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36197 : 815.0) no description available & (gnl|cdd|73036 : 189.0) no description available & (reliability: 2482.0) & (original description: Putative SMC5, Description = Structural maintenance of chromosomes protein 5, PFAM = PF02463)' T '31.2' 'cell.division' 'niben101scf03154_158634-185220' '(at5g15920 : 918.0) Encodes SMC5 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 5), a component of the SMC5/6 complex. SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage.; structural maintenance of chromosomes 5 (SMC5); FUNCTIONS IN: ATP binding; INVOLVED IN: sister chromatid cohesion, chromosome segregation; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G61460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36197 : 542.0) no description available & (gnl|cdd|73036 : 127.0) no description available & (reliability: 1836.0) & (original description: Putative SMC5, Description = Structural maintenance of chromosomes protein 5, PFAM = PF13476)' T '31.2' 'cell.division' 'niben101scf03203_257773-263864' '(at5g13840 : 642.0) FIZZY-related 3 (FZR3); FUNCTIONS IN: signal transducer activity; INVOLVED IN: signal transduction; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: FIZZY-related 2 (TAIR:AT4G22910.1). & (gnl|cdd|35526 : 475.0) no description available & (gnl|cdd|29257 : 143.0) no description available & (reliability: 1284.0) & (original description: Putative FZR3, Description = Protein FIZZY-RELATED 3, PFAM = PF00400;PF00400;PF00400)' T '31.2' 'cell.division' 'niben101scf03461_530997-544713' '(at1g69400 : 258.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G49910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36254 : 234.0) no description available & (gnl|cdd|29257 : 88.9) no description available & (reliability: 516.0) & (original description: Putative BUB3.3, Description = Mitotic checkpoint protein BUB3.3, PFAM = PF00400)' T '31.2' 'cell.division' 'niben101scf03474_307359-320188' '(at5g48600 : 1489.0) member of SMC subfamily; structural maintenance of chromosome 3 (SMC3); FUNCTIONS IN: transporter activity, ATP binding; INVOLVED IN: chromosome segregation, chromosome organization; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosomes 2 (TAIR:AT5G62410.1). & (gnl|cdd|36214 : 1150.0) no description available & (gnl|cdd|31389 : 458.0) no description available & (reliability: 2978.0) & (original description: Putative SMC4, Description = Structural maintenance of chromosomes protein 4, PFAM = PF06470;PF02463)' T '31.2' 'cell.division' 'niben101scf03634_764023-773313' '(at3g03790 : 1169.0) ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1). & (gnl|cdd|36002 : 197.0) no description available & (gnl|cdd|34783 : 109.0) no description available & (reliability: 2338.0) & (original description: Putative At3g03790, Description = Ankyrin repeat and regulator of chromosome condensation (RCC1) domain-containing protein, PFAM = PF12796;PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'niben101scf03670_463107-472474' '(at1g05910 : 1270.0) cell division cycle protein 48-related / CDC48-related; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G15120.1); Has 67654 Blast hits to 42823 proteins in 3246 species: Archae - 1526; Bacteria - 25275; Metazoa - 14857; Fungi - 7046; Plants - 4267; Viruses - 557; Other Eukaryotes - 14126 (source: NCBI BLink). & (gnl|cdd|35951 : 793.0) no description available & (p54774|cdc48_soybn : 225.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (gnl|cdd|31415 : 225.0) no description available & (reliability: 2540.0) & (original description: Putative atad2, Description = ATPase family AAA domain-containing protein 2, PFAM = PF00439;PF00004)' T '31.2' 'cell.division' 'niben101scf03713_89540-92928' '(at5g67260 : 304.0) Encode CYCD3;2, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development.; CYCLIN D3;2 (CYCD3;2); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle, regulation of cell proliferation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;3 (TAIR:AT3G50070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35875 : 261.0) no description available & (gnl|cdd|84548 : 101.0) no description available & (reliability: 556.0) & (original description: Putative cycD3b, Description = Cyclin D3b, PFAM = PF00134;PF02984)' T '31.2' 'cell.division' 'niben101scf03781_385883-389226' '(at4g34160 : 231.0) encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1.; CYCLIN D3;1 (CYCD3;1); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;2 (TAIR:AT5G67260.1); Has 3155 Blast hits to 3153 proteins in 309 species: Archae - 0; Bacteria - 0; Metazoa - 1504; Fungi - 362; Plants - 1012; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (gnl|cdd|35875 : 227.0) no description available & (gnl|cdd|84548 : 97.3) no description available & (reliability: 462.0) & (original description: Putative cycD, Description = Cyclin D3, PFAM = PF02984;PF00134)' T '31.2' 'cell.division' 'niben101scf03786_115928-133588' '(at2g32900 : 784.0) homologous to Drosophila ZW10, a centromere/kinetochore protein involved in chromosome segregation; ATZW10; INVOLVED IN: chromosome segregation; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Centromere/kinetochore protein Zw10 (InterPro:IPR009361); Has 272 Blast hits to 258 proteins in 128 species: Archae - 0; Bacteria - 2; Metazoa - 125; Fungi - 86; Plants - 38; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|37374 : 399.0) no description available & (gnl|cdd|69753 : 356.0) no description available & (reliability: 1568.0) & (original description: Putative ZW10, Description = Centromere/kinetochore protein zw10 homolog, PFAM = PF06248)' T '31.2' 'cell.division' 'niben101scf03930_573420-611374' '(at5g19420 : 828.0) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-related (InterPro:IPR017455), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Pleckstrin homology-type (InterPro:IPR011993), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G12350.1). & (gnl|cdd|34783 : 134.0) no description available & (gnl|cdd|36640 : 114.0) no description available & (reliability: 1656.0) & (original description: Putative PRAF1, Description = Regulator of chromosome condensation and FYVE zinc finger domain-containing protein, PFAM = PF01363;PF00415;PF00415;PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'niben101scf04206_380361-402258' '(at2g20190 : 1873.0) Encodes a microtubule-associated protein that is involved in both cell division and cell expansion. It likely promotes microtubule stability.; CLIP-associated protein (CLASP); FUNCTIONS IN: binding; INVOLVED IN: mitosis, protein stabilization, cell growth; LOCATED IN: spindle microtubule, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38167 : 237.0) no description available & (reliability: 3746.0) & (original description: Putative CLASP, Description = CLIP-associated protein, PFAM = PF12348;PF12348;PF02985)' T '31.2' 'cell.division' 'niben101scf04445_486831-497669' '(at3g55580 : 358.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT3G53830.1); Has 20178 Blast hits to 6212 proteins in 476 species: Archae - 78; Bacteria - 2696; Metazoa - 7040; Fungi - 1181; Plants - 2975; Viruses - 2; Other Eukaryotes - 6206 (source: NCBI BLink). & (reliability: 716.0) & (original description: Putative glysoja_036664, Description = Putative E3 ubiquitin-protein ligase HERC1, PFAM = PF00415;PF00415)' T '31.2' 'cell.division' 'niben101scf04570_710107-714015' '(gnl|cdd|38293 : 377.0) no description available & (at3g27280 : 363.0) Part of protein complexes that are necessary for proficient mitochondrial function or biogenesis, thereby supporting cell division and differentiation in apical tissues; prohibitin 4 (PHB4); INVOLVED IN: response to stress; LOCATED IN: mitochondrion, plasma membrane, vacuole, respiratory chain complex I, plant-type cell wall; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prohibitin (InterPro:IPR000163), Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: prohibitin 3 (TAIR:AT5G40770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|48213 : 303.0) no description available & (reliability: 726.0) & (original description: Putative phb, Description = Prohibitin-1, PFAM = PF01145)' T '31.2' 'cell.division' 'niben101scf04574_993494-996330' '(at5g40770 : 389.0) prohibitin 3; prohibitin 3 (PHB3); INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Prohibitin (InterPro:IPR000163), Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: prohibitin 4 (TAIR:AT3G27280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38293 : 388.0) no description available & (gnl|cdd|48213 : 304.0) no description available & (reliability: 778.0) & (original description: Putative PHB3, Description = Prohibitin-3, mitochondrial, PFAM = PF01145)' T '31.2' 'cell.division' 'niben101scf04639_318269-333550' '(q96372|cdc48_capan : 1505.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (at5g03340 : 1441.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: protein binding, ATPase activity; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: cell division cycle 48 (TAIR:AT3G09840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35949 : 892.0) no description available & (gnl|cdd|30812 : 481.0) no description available & (reliability: 2882.0) & (original description: Putative cdcD, Description = Transitional endoplasmic reticulum ATPase, PFAM = PF00004;PF00004;PF02933;PF02359)' T '31.2' 'cell.division' 'niben101scf04926_603577-607293' '(gnl|cdd|35526 : 356.0) no description available & (at4g33270 : 343.0) putative cdc20 protein (CDC20.1); CDC20.1; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT4G33260.1); Has 49595 Blast hits to 24757 proteins in 709 species: Archae - 60; Bacteria - 7548; Metazoa - 19325; Fungi - 10981; Plants - 5978; Viruses - 0; Other Eukaryotes - 5703 (source: NCBI BLink). & (gnl|cdd|29257 : 132.0) no description available & (reliability: 686.0) & (original description: Putative cdc20, Description = Anaphase-promoting complex subunit cdc20, PFAM = PF00400;PF00400;PF00400;PF12894)' T '31.2' 'cell.division' 'niben101scf05201_187096-203859' '(at3g57090 : 211.0) Encodes a protein with similarity to yeast FIS proteins. These membrane anchored proteins bind DRP proteins and function during organelle division. FIS1B is expressed ubiquitously and appears to be involved in peroxisome division.; BIGYIN; FUNCTIONS IN: binding; INVOLVED IN: peroxisome fission, mitochondrion organization; LOCATED IN: mitochondrion, peroxisome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide repeat 11 Fission 1 protein (InterPro:IPR016543), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G12390.1); Has 347 Blast hits to 347 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 148; Plants - 92; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|38574 : 153.0) no description available & (reliability: 422.0) & (original description: Putative FIS1A, Description = Mitochondrial fission 1 protein A, PFAM = PF14852;PF14853)' T '31.2' 'cell.division' 'niben101scf05395_248171-255018' '(at5g11300 : 410.0) mitotic-like cyclin, core cell cycle gene that is expressed only in roots (RT_PCR), portions with mitotic activity only (whole mount in situ).; mitotic-like cyclin 3B from Arabidopsis (CYC3B); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin (InterPro:IPR006670), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: cyclin a2;1 (TAIR:AT5G25380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35873 : 304.0) no description available & (p25010|ccnal_dauca : 271.0) G2/mitotic-specific cyclin C13-1 (A-like cyclin) (Fragment) - Daucus carota (Carrot) & (gnl|cdd|34629 : 169.0) no description available & (reliability: 784.0) & (original description: Putative cycA3, Description = Cyclin-A1-1, PFAM = PF00134;PF02984)' T '31.2' 'cell.division' 'niben101scf05574_292033-308695' '(at3g55580 : 536.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT3G53830.1); Has 20178 Blast hits to 6212 proteins in 476 species: Archae - 78; Bacteria - 2696; Metazoa - 7040; Fungi - 1181; Plants - 2975; Viruses - 2; Other Eukaryotes - 6206 (source: NCBI BLink). & (gnl|cdd|34783 : 132.0) no description available & (gnl|cdd|36640 : 104.0) no description available & (reliability: 1072.0) & (original description: Putative BnaC08g26510D, Description = BnaC08g26510D protein, PFAM = PF00415;PF00415;PF00415;PF13540)' T '31.2' 'cell.division' 'niben101scf05643_160842-164433' '(at4g34160 : 264.0) encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1.; CYCLIN D3;1 (CYCD3;1); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;2 (TAIR:AT5G67260.1); Has 3155 Blast hits to 3153 proteins in 309 species: Archae - 0; Bacteria - 0; Metazoa - 1504; Fungi - 362; Plants - 1012; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (gnl|cdd|35875 : 243.0) no description available & (gnl|cdd|84548 : 99.6) no description available & (reliability: 528.0) & (original description: Putative cycD1, Description = Cyclin D3, PFAM = PF00134;PF02984)' T '31.2' 'cell.division' 'niben101scf05697_37447-43091' '(at3g01800 : 239.0) Ribosome recycling factor; INVOLVED IN: translational termination, translation; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosome recycling factor, bacterial-like (InterPro:IPR015998), Ribosome recycling factor (InterPro:IPR002661); BEST Arabidopsis thaliana protein match is: ribosome recycling factor, chloroplast precursor (TAIR:AT3G63190.1); Has 7776 Blast hits to 7776 proteins in 2635 species: Archae - 0; Bacteria - 5288; Metazoa - 113; Fungi - 65; Plants - 94; Viruses - 0; Other Eukaryotes - 2216 (source: NCBI BLink). & (gnl|cdd|80499 : 163.0) no description available & (gnl|cdd|39956 : 150.0) no description available & (reliability: 478.0) & (original description: Putative At3g01800, Description = At3g01800, PFAM = PF01765)' T '31.2' 'cell.division' 'niben101scf05982_163207-176012' '(at1g02010 : 899.0) member of KEULE Gene Family; secretory 1A (SEC1A); FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, vesicle-mediated transport, vesicle docking involved in exocytosis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: Sec1/munc18-like (SM) proteins superfamily (TAIR:AT1G12360.1). & (q7xwp3|sec1a_orysa : 802.0) Probable protein transport Sec1a - Oryza sativa (Rice) & (gnl|cdd|36514 : 588.0) no description available & (gnl|cdd|85171 : 292.0) no description available & (reliability: 1798.0) & (original description: Putative SEC1A, Description = Protein transport Sec1a, PFAM = PF00995)' T '31.2' 'cell.division' 'niben101scf06483_196867-215744' '(at2g34780 : 150.0) Encodes a novel protein of unknown function that is essential for embryonic development. Severe loss of function alleles are embryo lethal. Analysis of a partial loss of function allele indicates a role for EMB1611 in regulation of endoreduplication and maintenance of meristem cell fate. It appears to be required for maintaining the CLV-WUS regulatory pathway.; MATERNAL EFFECT EMBRYO ARREST 22 (MEE22); INVOLVED IN: negative regulation of DNA endoreduplication, meristem structural organization, embryo development ending in seed dormancy, maintenance of meristem identity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. & (gnl|cdd|35383 : 88.4) no description available & (reliability: 300.0) & (original description: Putative , Description = Putative nucleoprotein TPR-like, PFAM = )' T '31.2' 'cell.division' 'niben101scf06541_16353-24510' '(at2g29680 : 492.0) Encodes cell division control protein 6 (CDC6).; cell division control 6 (CDC6); FUNCTIONS IN: ATP binding; INVOLVED IN: regulation of cell cycle, DNA replication; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), CDC6, C-terminal (InterPro:IPR015163), Cell division control, Cdc6 (InterPro:IPR016314); BEST Arabidopsis thaliana protein match is: Cell division control, Cdc6 (TAIR:AT1G07270.1); Has 1385 Blast hits to 1377 proteins in 339 species: Archae - 397; Bacteria - 0; Metazoa - 348; Fungi - 289; Plants - 116; Viruses - 0; Other Eukaryotes - 235 (source: NCBI BLink). & (gnl|cdd|37438 : 349.0) no description available & (gnl|cdd|31663 : 148.0) no description available & (reliability: 984.0) & (original description: Putative CDC6B, Description = Cell division control protein 6 homolog B, PFAM = PF09079;PF13401)' T '31.2' 'cell.division' 'niben101scf06560_96701-102928' '(at3g02300 : 576.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1); Has 21089 Blast hits to 6160 proteins in 444 species: Archae - 90; Bacteria - 2769; Metazoa - 6703; Fungi - 1268; Plants - 2952; Viruses - 0; Other Eukaryotes - 7307 (source: NCBI BLink). & (gnl|cdd|34783 : 127.0) no description available & (gnl|cdd|36640 : 103.0) no description available & (reliability: 1152.0) & (original description: Putative PGSC0003DMG400001467, Description = Putative E3 ubiquitin-protein ligase HERC4, PFAM = PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'niben101scf06560_96832-103592' '(at3g02300 : 720.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1); Has 21089 Blast hits to 6160 proteins in 444 species: Archae - 90; Bacteria - 2769; Metazoa - 6703; Fungi - 1268; Plants - 2952; Viruses - 0; Other Eukaryotes - 7307 (source: NCBI BLink). & (gnl|cdd|34783 : 159.0) no description available & (gnl|cdd|36640 : 116.0) no description available & (reliability: 1440.0) & (original description: Putative Sb01g015100, Description = Putative uncharacterized protein Sb01g015100, PFAM = PF00415;PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'niben101scf06631_51534-62011' '(at1g15660 : 157.0) Encodes a homologue of the human centromeric protein C (CENP-C). CENP-C co-localizes with the 180 bp centromeric regions of chromosomes throughout the cell cycle, but does not completely cover the 180 bp regions.; centromere protein C (CENP-C); Has 380 Blast hits to 353 proteins in 129 species: Archae - 0; Bacteria - 6; Metazoa - 108; Fungi - 26; Plants - 78; Viruses - 8; Other Eukaryotes - 154 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative CENPC1, Description = Centromere protein C1, PFAM = )' T '31.2' 'cell.division' 'niben101scf06674_103076-111545' '(at3g02450 : 635.0) cell division protein ftsH, putative; FUNCTIONS IN: in 6 functions; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 8 (TAIR:AT1G06430.1); Has 43920 Blast hits to 41347 proteins in 3350 species: Archae - 1585; Bacteria - 19560; Metazoa - 4991; Fungi - 3838; Plants - 3354; Viruses - 31; Other Eukaryotes - 10561 (source: NCBI BLink). & (gnl|cdd|35950 : 377.0) no description available & (gnl|cdd|30813 : 349.0) no description available & (o82150|ftsh_tobac : 274.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (reliability: 1270.0) & (original description: Putative FTSHI3, Description = Probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic, PFAM = PF06480;PF00004)' T '31.2' 'cell.division' 'niben101scf06757_106679-114747' '(at1g65920 : 841.0) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Pleckstrin homology (InterPro:IPR001849), Zinc finger, FYVE-type (InterPro:IPR000306), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-related (InterPro:IPR017455), Pleckstrin homology-type (InterPro:IPR011993), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G42140.1); Has 20784 Blast hits to 8293 proteins in 486 species: Archae - 65; Bacteria - 2335; Metazoa - 8187; Fungi - 1149; Plants - 2727; Viruses - 3; Other Eukaryotes - 6318 (source: NCBI BLink). & (gnl|cdd|34783 : 122.0) no description available & (gnl|cdd|36640 : 111.0) no description available & (reliability: 1682.0) & (original description: Putative BnaA06g20390D, Description = BnaA06g20390D protein, PFAM = PF13713;PF01363;PF08381;PF00415;PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'niben101scf06757_107574-113943' '(at1g65920 : 751.0) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Pleckstrin homology (InterPro:IPR001849), Zinc finger, FYVE-type (InterPro:IPR000306), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-related (InterPro:IPR017455), Pleckstrin homology-type (InterPro:IPR011993), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G42140.1); Has 20784 Blast hits to 8293 proteins in 486 species: Archae - 65; Bacteria - 2335; Metazoa - 8187; Fungi - 1149; Plants - 2727; Viruses - 3; Other Eukaryotes - 6318 (source: NCBI BLink). & (gnl|cdd|34783 : 123.0) no description available & (gnl|cdd|36640 : 112.0) no description available & (reliability: 1502.0) & (original description: Putative BnaA06g20390D, Description = BnaA06g20390D protein, PFAM = PF01363;PF00415;PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'niben101scf07058_550514-568868' '(at5g19420 : 902.0) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-related (InterPro:IPR017455), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Pleckstrin homology-type (InterPro:IPR011993), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G12350.1). & (gnl|cdd|34783 : 143.0) no description available & (gnl|cdd|36640 : 109.0) no description available & (reliability: 1804.0) & (original description: Putative PRAF1, Description = Regulator of chromosome condensation and FYVE zinc finger domain-containing protein, PFAM = PF13713;PF01363;PF08381;PF00415;PF00415;PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'niben101scf07163_68531-76649' '(gnl|cdd|30231 : 476.0) no description available & (at5g55280 : 465.0) Encodes one of two FtsZ proteins, tubulin-like proteins, in Arabidopsis. It is involved in chloroplast division.; homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (FTSZ1-1); FUNCTIONS IN: protein binding, structural molecule activity; INVOLVED IN: chloroplast fission, plastid fission; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cell division protein FtsZ, N-terminal (InterPro:IPR000158), Tubulin, conserved site (InterPro:IPR017975), Cell division protein FtsZ, conserved site (InterPro:IPR020805), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: Tubulin/FtsZ family protein (TAIR:AT3G52750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 930.0) & (original description: Putative ftsZ, Description = Chloroplast FtsZ-like protein, PFAM = PF12327;PF00091)' T '31.2' 'cell.division' 'niben101scf07391_101153-103803' '(at1g63110 : 121.0) GPI transamidase subunit PIG-U; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GPI transamidase subunit PIG-U (InterPro:IPR009600); BEST Arabidopsis thaliana protein match is: GPI transamidase subunit PIG-U (TAIR:AT1G12730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative At1g63110, Description = GPI transamidase subunit PIG-U, PFAM = PF06728)' T '31.2' 'cell.division' 'niben101scf07400_77112-102509' '(at5g49880 : 634.0) mitotic checkpoint family protein; CONTAINS InterPro DOMAIN/s: Mitotic checkpoint (InterPro:IPR008672); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|69099 : 327.0) no description available & (gnl|cdd|39793 : 294.0) no description available & (reliability: 1268.0) & (original description: Putative MAD1, Description = Mitotic spindle checkpoint protein MAD1, PFAM = PF05557)' T '31.2' 'cell.division' 'niben101scf07440_168952-188248' '(at3g19180 : 728.0) Encodes a chloroplast division factor located in the plastid inner envelope with its N-terminus exposed to the stroma. PARC6 influences FtsZ assembly and is required for recruitment of PDV1 during chloroplast division.; paralog of ARC6 (PARC6); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G42480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1456.0) & (original description: Putative CDP1, Description = Plastid division protein CDP1, chloroplastic, PFAM = PF13355)' T '31.2' 'cell.division' 'niben101scf07586_12031-18317' '(q38774|cdc2c_antma : 550.0) Cell division control protein 2 homolog C (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (at2g38620 : 534.0) Encodes a member of a plant specific family of cyclin dependent kinases.; cyclin-dependent kinase B1;2 (CDKB1;2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B1;1 (TAIR:AT3G54180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35814 : 427.0) no description available & (gnl|cdd|29142 : 263.0) no description available & (reliability: 1068.0) & (original description: Putative CDC2C, Description = Cell division control protein 2 homolog C, PFAM = PF00069)' T '31.2' 'cell.division' 'niben101scf07778_318139-328751' '(at3g52750 : 594.0) Nuclear gene that encodes a plastidial division protein (FtsZ2-2).; FTSZ2-2; FUNCTIONS IN: structural molecule activity, GTP binding, GTPase activity; INVOLVED IN: protein polymerization; LOCATED IN: chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cell division protein FtsZ, N-terminal (InterPro:IPR000158), Cell division protein FtsZ, conserved site (InterPro:IPR020805), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: Tubulin/FtsZ family protein (TAIR:AT2G36250.2); Has 10464 Blast hits to 10464 proteins in 3156 species: Archae - 455; Bacteria - 6195; Metazoa - 8; Fungi - 0; Plants - 153; Viruses - 0; Other Eukaryotes - 3653 (source: NCBI BLink). & (gnl|cdd|30231 : 459.0) no description available & (reliability: 1188.0) & (original description: Putative ftsZ, Description = Chloroplast FtsZ-like protein, PFAM = PF12327;PF00091)' T '31.2' 'cell.division' 'niben101scf07801_45775-48350' '(at5g43070 : 93.6) WPP family members contains an NE targeting domain. This domain, called the WPP domain after a highly conserved Trp-Pro-Pro motif, is necessary and sufficient for NE targeting of WPP1. RNAi suppression of WPP1 resulted in reduced mitotic activity.; WPP domain protein 1 (WPP1); BEST Arabidopsis thaliana protein match is: WPP domain protein 2 (TAIR:AT1G47200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative MAF1, Description = MFP1 attachment factor 1, PFAM = PF13943)' T '31.2' 'cell.division' 'niben101scf08001_89469-96040' '(at3g19590 : 602.0) Encodes a protein that may have a role in the spindle assembly checkpoint.; BUB (BUDDING UNINHIBITED BY BENZYMIDAZOL) 3.1 (BUB3.1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G49910.1); Has 7284 Blast hits to 5351 proteins in 449 species: Archae - 14; Bacteria - 1710; Metazoa - 2206; Fungi - 1743; Plants - 568; Viruses - 0; Other Eukaryotes - 1043 (source: NCBI BLink). & (gnl|cdd|36254 : 455.0) no description available & (gnl|cdd|29257 : 115.0) no description available & (reliability: 1204.0) & (original description: Putative bub3, Description = Mitotic checkpoint protein BUB3, PFAM = PF00400;PF00400;PF00400)' T '31.2' 'cell.division' 'niben101scf08032_33534-40735' '(at5g05490 : 414.0) Encodes a RAD21-like gene essential for meiosis. Encodes a 617 a.a. protein that is slightly shorter in the N-terminus than SYN1 BP2.; SYNAPTIC 1 (SYN1); CONTAINS InterPro DOMAIN/s: Rad21/Rec8 like protein, C-terminal (InterPro:IPR006909), Rad21/Rec8 like protein, N-terminal (InterPro:IPR006910); BEST Arabidopsis thaliana protein match is: sister chromatid cohesion 1 protein 4 (TAIR:AT5G16270.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36427 : 194.0) no description available & (gnl|cdd|68400 : 122.0) no description available & (reliability: 828.0) & (original description: Putative SYN1, Description = Sister chromatid cohesion 1 protein 1, PFAM = PF04824;PF04825)' T '31.2' 'cell.division' 'niben101scf08065_9989-12949' '(q38775|cdc2d_antma : 549.0) Cell division control protein 2 homolog D (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (at1g20930 : 544.0) Cyclin-dependent kinase, expressed in flowers and suspension cell culture, expression peaks during M phase in synchronized cultures. Required for proper organization of the shoot apical meristem and for hormone signaling. Expressed in the shoot apical meristem. Involved in regulation of the G2/M transition of the mitotic cell cycle.; cyclin-dependent kinase B2;2 (CDKB2;2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B2;1 (TAIR:AT1G76540.1); Has 109034 Blast hits to 107606 proteins in 3051 species: Archae - 93; Bacteria - 11427; Metazoa - 41458; Fungi - 12141; Plants - 24398; Viruses - 437; Other Eukaryotes - 19080 (source: NCBI BLink). & (gnl|cdd|35814 : 430.0) no description available & (gnl|cdd|29142 : 256.0) no description available & (reliability: 1088.0) & (original description: Putative CDC2D, Description = Cell division control protein 2 homolog D, PFAM = PF00069)' T '31.2' 'cell.division' 'niben101scf08198_142165-152249' '(at1g15660 : 106.0) Encodes a homologue of the human centromeric protein C (CENP-C). CENP-C co-localizes with the 180 bp centromeric regions of chromosomes throughout the cell cycle, but does not completely cover the 180 bp regions.; centromere protein C (CENP-C); Has 380 Blast hits to 353 proteins in 129 species: Archae - 0; Bacteria - 6; Metazoa - 108; Fungi - 26; Plants - 78; Viruses - 8; Other Eukaryotes - 154 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative CENPC1, Description = Centromere protein C1, PFAM = )' T '31.2' 'cell.division' 'niben101scf08208_203694-219562' '(at2g34780 : 150.0) Encodes a novel protein of unknown function that is essential for embryonic development. Severe loss of function alleles are embryo lethal. Analysis of a partial loss of function allele indicates a role for EMB1611 in regulation of endoreduplication and maintenance of meristem cell fate. It appears to be required for maintaining the CLV-WUS regulatory pathway.; MATERNAL EFFECT EMBRYO ARREST 22 (MEE22); INVOLVED IN: negative regulation of DNA endoreduplication, meristem structural organization, embryo development ending in seed dormancy, maintenance of meristem identity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 300.0) & (original description: Putative , Description = Putative nucleoprotein TPR-like, PFAM = )' T '31.2' 'cell.division' 'niben101scf08298_52621-75211' '(at2g20190 : 1350.0) Encodes a microtubule-associated protein that is involved in both cell division and cell expansion. It likely promotes microtubule stability.; CLIP-associated protein (CLASP); FUNCTIONS IN: binding; INVOLVED IN: mitosis, protein stabilization, cell growth; LOCATED IN: spindle microtubule, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38167 : 243.0) no description available & (reliability: 2700.0) & (original description: Putative CLASP, Description = AtCLASP, PFAM = PF12348;PF12348;PF02985)' T '31.2' 'cell.division' 'niben101scf08357_92900-106006' '(at5g48600 : 1521.0) member of SMC subfamily; structural maintenance of chromosome 3 (SMC3); FUNCTIONS IN: transporter activity, ATP binding; INVOLVED IN: chromosome segregation, chromosome organization; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosomes 2 (TAIR:AT5G62410.1). & (gnl|cdd|36214 : 1148.0) no description available & (gnl|cdd|31389 : 460.0) no description available & (reliability: 3042.0) & (original description: Putative SMC4, Description = Structural maintenance of chromosomes protein 4, PFAM = PF02463;PF06470)' T '31.2' 'cell.division' 'niben101scf08812_99466-109562' '(at4g21800 : 460.0) Encodes QQT2. Required for early embryo development. qqt1 mutant lines are embryo-defective. Participates in the organization of microtubules during cell division. Interacts with QQT1 (encoded by AT5G22370).; quatre-quart2 (QQT2); FUNCTIONS IN: nucleotide binding, ATP binding; INVOLVED IN: embryo development, cell division; LOCATED IN: microtubule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function, ATP binding (InterPro:IPR004130); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G12790.5); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36745 : 456.0) no description available & (gnl|cdd|86218 : 234.0) no description available & (reliability: 920.0) & (original description: Putative gpn1, Description = AAA ATPase domain-containing protein, PFAM = PF03029)' T '31.2' 'cell.division' 'niben101scf09372_479409-486628' '(at5g16040 : 578.0) Regulator of chromosome condensation (RCC1) family protein; FUNCTIONS IN: chromatin binding, Ran GTPase binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT3G02510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|34783 : 159.0) no description available & (gnl|cdd|36640 : 106.0) no description available & (reliability: 1156.0) & (original description: Putative DR04, Description = Regulator of chromosome condensation domain-containing protein, PFAM = PF00415;PF00415;PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'niben101scf09589_74831-80965' '(at5g60870 : 519.0) Regulator of chromosome condensation (RCC1) family protein; FUNCTIONS IN: Ran GTPase binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT3G02510.1); Has 20536 Blast hits to 6008 proteins in 433 species: Archae - 106; Bacteria - 2600; Metazoa - 7212; Fungi - 1292; Plants - 3327; Viruses - 0; Other Eukaryotes - 5999 (source: NCBI BLink). & (gnl|cdd|34783 : 143.0) no description available & (gnl|cdd|36640 : 99.1) no description available & (reliability: 1038.0) & (original description: Putative At5g60870, Description = Regulator of chromosome condensation repeat protein-like protein RUG3, PFAM = PF00415;PF00415;PF00415;PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'niben101scf09987_59182-64078' '(at3g55580 : 187.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT3G53830.1); Has 20178 Blast hits to 6212 proteins in 476 species: Archae - 78; Bacteria - 2696; Metazoa - 7040; Fungi - 1181; Plants - 2975; Viruses - 2; Other Eukaryotes - 6206 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative PGSC0003DMG400027194, Description = Chromosome condensation regulator RCC1 repeat protein, PFAM = PF13540)' T '31.2' 'cell.division' 'niben101scf10277_23991-31469' '(q96372|cdc48_capan : 1484.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (at3g53230 : 1436.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, nucleolus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 66274 Blast hits to 38860 proteins in 3301 species: Archae - 1748; Bacteria - 29009; Metazoa - 8678; Fungi - 6310; Plants - 5885; Viruses - 85; Other Eukaryotes - 14559 (source: NCBI BLink). & (gnl|cdd|35949 : 890.0) no description available & (gnl|cdd|30812 : 480.0) no description available & (reliability: 2872.0) & (original description: Putative CDC48A, Description = Cell division control protein 48 homolog A, PFAM = PF02359;PF00004;PF00004;PF02933)' T '31.2' 'cell.division' 'niben101scf10381_111446-128508' '(at1g22260 : 461.0) One of two nearly identical proteins (ZYP1b) identified by similarity to transverse filament (TF) proteins. These proteins are involved in chromosome synapsis during meiosis I and localize to the synaptonemal complex (SC). Single mutants have reduced fertility and double mutants (induced by RNAi) have severely reduced fertility.; ZYP1a; BEST Arabidopsis thaliana protein match is: Myosin heavy chain-related protein (TAIR:AT1G22275.1); Has 173955 Blast hits to 88084 proteins in 3391 species: Archae - 2245; Bacteria - 35093; Metazoa - 72717; Fungi - 13338; Plants - 8123; Viruses - 835; Other Eukaryotes - 41604 (source: NCBI BLink). & (gnl|cdd|35383 : 90.3) no description available & (reliability: 922.0) & (original description: Putative ZEP1, Description = Synaptonemal complex protein 1, PFAM = )' T '31.2' 'cell.division' 'niben101scf10482_220532-229355' '(at1g27060 : 380.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G19420.1); Has 19815 Blast hits to 6041 proteins in 472 species: Archae - 85; Bacteria - 2553; Metazoa - 7293; Fungi - 979; Plants - 2476; Viruses - 2; Other Eukaryotes - 6427 (source: NCBI BLink). & (gnl|cdd|34783 : 139.0) no description available & (gnl|cdd|36640 : 112.0) no description available & (reliability: 760.0) & (original description: Putative At1g27060, Description = At1g27060, PFAM = PF00415;PF00415;PF00415;PF00415;PF00415)' T '31.2' 'cell.division' 'niben101scf10482_226006-228741' '(at1g27060 : 209.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G19420.1); Has 19815 Blast hits to 6041 proteins in 472 species: Archae - 85; Bacteria - 2553; Metazoa - 7293; Fungi - 979; Plants - 2476; Viruses - 2; Other Eukaryotes - 6427 (source: NCBI BLink). & (gnl|cdd|34783 : 85.1) no description available & (reliability: 418.0) & (original description: Putative At1g27060, Description = Putative E3 ubiquitin-protein ligase HERC1, PFAM = PF00415;PF00415)' T '31.2' 'cell.division' 'niben101scf10560_103195-107259' '(at3g11450 : 588.0) DnaJ domain ;Myb-like DNA-binding domain; FUNCTIONS IN: heat shock protein binding, DNA binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), MYB-like (InterPro:IPR017877), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778); BEST Arabidopsis thaliana protein match is: DnaJ domain ;Myb-like DNA-binding domain (TAIR:AT5G06110.2); Has 60375 Blast hits to 43868 proteins in 3410 species: Archae - 228; Bacteria - 14410; Metazoa - 19184; Fungi - 5541; Plants - 3499; Viruses - 192; Other Eukaryotes - 17321 (source: NCBI BLink). & (gnl|cdd|34866 : 179.0) no description available & (gnl|cdd|35943 : 126.0) no description available & (reliability: 1176.0) & (original description: Putative GlsA, Description = Gonidialess A related factor, PFAM = PF00249;PF00249;PF00226)' T '31.2' 'cell.division' 'niben101scf10708_34201-36767' '(at5g43070 : 96.7) WPP family members contains an NE targeting domain. This domain, called the WPP domain after a highly conserved Trp-Pro-Pro motif, is necessary and sufficient for NE targeting of WPP1. RNAi suppression of WPP1 resulted in reduced mitotic activity.; WPP domain protein 1 (WPP1); BEST Arabidopsis thaliana protein match is: WPP domain protein 2 (TAIR:AT1G47200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative MAF1, Description = MFP1 attachment factor 1, PFAM = PF13943)' T '31.2' 'cell.division' 'niben101scf10908_354612-366734' '(p37706|rrfc_dauca : 254.0) Ribosome recycling factor, chloroplast precursor (Ribosome-releasing factor, chloroplast) (Nuclear located protein D2) (Fragment) - Daucus carota (Carrot) & (gnl|cdd|80499 : 238.0) no description available & (at3g63190 : 233.0) The gene encodes a chloroplast ribosome recycling factor homologue. Analysis of mutants revealed its role in the chloroplast development and eary stages of embryo development.; "ribosome recycling factor, chloroplast precursor" (RRF); FUNCTIONS IN: copper ion binding; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosome recycling factor, bacterial-like (InterPro:IPR015998), Ribosome recycling factor (InterPro:IPR002661); BEST Arabidopsis thaliana protein match is: Ribosome recycling factor (TAIR:AT3G01800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39956 : 170.0) no description available & (reliability: 466.0) & (original description: Putative RRF, Description = Ribosome-recycling factor, chloroplastic, PFAM = PF01765)' T '31.2' 'cell.division' 'niben101scf10940_390858-396625' '(q96449|dmc1_soybn : 603.0) Meiotic recombination protein DMC1 homolog - Glycine max (Soybean) & (at3g22880 : 578.0) Expression of the AtDMC1 is restricted to pollen mother cells in anthers and to megaspore mother cells in ovules. Similar to meiosis-specific yeast DMC gene.; DISRUPTION OF MEIOTIC CONTROL 1 (DMC1); FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, meiosis, chiasma assembly, reciprocal meiotic recombination, DNA metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), DNA repair Rad51/transcription factor NusA, alpha-helical (InterPro:IPR010995), ATPase, AAA+ type, core (InterPro:IPR003593), Meiotic recombinase Dmc1 (InterPro:IPR011940), DNA recombination and repair protein, RecA-like (InterPro:IPR016467), DNA recombination/repair protein RecA, monomer-monomer interface (InterPro:IPR020587), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis thaliana protein match is: RAS associated with diabetes protein 51 (TAIR:AT5G20850.1); Has 11998 Blast hits to 11924 proteins in 3797 species: Archae - 689; Bacteria - 8026; Metazoa - 742; Fungi - 447; Plants - 503; Viruses - 22; Other Eukaryotes - 1569 (source: NCBI BLink). & (gnl|cdd|71852 : 425.0) no description available & (gnl|cdd|36647 : 393.0) no description available & (reliability: 1156.0) & (original description: Putative dmc1, Description = DNA repair protein RAD51, PFAM = PF08423)' T '31.2' 'cell.division' 'niben101scf10980_54772-72969' '(at2g20000 : 1053.0) Required for cell division and cell differentiation in meristems. Encodes a homolog of the CDC27 subunit of the anaphase-promoting complex (APC). Unlike other CDC27 homologs in Arabidopsis, its transcription is cell cycle regulated. Strong hbt mutants give rise to seedlings that lack an anatomically recognizable quiescent center and differentiated columella root cap cells, the cell types derived from the wild-type hypophysis. Furthermore, they have no mitotically active root meristem and lack a differentiated lateral root cap.; HOBBIT (HBT); FUNCTIONS IN: binding; INVOLVED IN: in 10 processes; LOCATED IN: anaphase-promoting complex, nucleus, cell plate, spindle; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G16320.1); Has 19127 Blast hits to 10740 proteins in 1344 species: Archae - 1126; Bacteria - 9300; Metazoa - 1888; Fungi - 782; Plants - 572; Viruses - 0; Other Eukaryotes - 5459 (source: NCBI BLink). & (gnl|cdd|36341 : 545.0) no description available & (reliability: 2106.0) & (original description: Putative CDC27B, Description = Cell division cycle protein 27 homolog B, PFAM = PF00515;PF00515;PF12895;PF13181)' T '31.2' 'cell.division' 'niben101scf11253_290148-299532' '(at5g61960 : 540.0) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML1 is a member of two sister clades of mei2-like gene family, AML1 through AML5 and belongs to the clade named ALM14. AML1 is expressed during early embryo development, particularly along embryonic axis at torpedo stage, in shoot apex (weaker expression) and in the organogenic regions of floral apices.; MEI2-like protein 1 (ML1); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like 4 (TAIR:AT5G07290.1); Has 4583 Blast hits to 4209 proteins in 289 species: Archae - 0; Bacteria - 6; Metazoa - 2486; Fungi - 644; Plants - 914; Viruses - 0; Other Eukaryotes - 533 (source: NCBI BLink). & (gnl|cdd|39859 : 227.0) no description available & (gnl|cdd|67666 : 187.0) no description available & (o65001|te1_maize : 122.0) Protein terminal ear1 - Zea mays (Maize) & (reliability: 1080.0) & (original description: Putative BnaA02g33080D, Description = BnaA02g33080D protein, PFAM = PF00076;PF04059)' T '31.2' 'cell.division' 'niben101scf11738_18713-26342' '(p29620|kc47_orysa : 590.0) CDC2+/CDC28-related protein kinase R2 (EC 2.7.11.22) - Oryza sativa (Rice) & (at1g18040 : 565.0) cyclin-dependent kinase D1;3 (CDKD1;3); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase D1;1 (TAIR:AT1G73690.1); Has 119527 Blast hits to 118054 proteins in 4087 species: Archae - 74; Bacteria - 13556; Metazoa - 44153; Fungi - 12365; Plants - 29368; Viruses - 395; Other Eukaryotes - 19616 (source: NCBI BLink). & (gnl|cdd|35878 : 498.0) no description available & (gnl|cdd|29142 : 264.0) no description available & (reliability: 1130.0) & (original description: Putative cak, Description = CDK-activating kinase, PFAM = PF00069)' T '31.2' 'cell.division' 'niben101scf11802_51790-100910' '(at2g27170 : 1333.0) Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment.; TITAN7 (TTN7); FUNCTIONS IN: ATP binding; INVOLVED IN: sister chromatid cohesion, chromosome segregation; LOCATED IN: cohesin complex, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosomes 2 (TAIR:AT5G62410.1); Has 158776 Blast hits to 77347 proteins in 3496 species: Archae - 2059; Bacteria - 28403; Metazoa - 67946; Fungi - 11949; Plants - 6773; Viruses - 706; Other Eukaryotes - 40940 (source: NCBI BLink). & (gnl|cdd|36182 : 1116.0) no description available & (gnl|cdd|31389 : 455.0) no description available & (reliability: 2666.0) & (original description: Putative SMC3, Description = Structural maintenance of chromosomes protein 3, PFAM = PF02463;PF06470)' T '31.2' 'cell.division' 'niben101scf12289_135867-138934' '(gnl|cdd|35419 : 278.0) no description available & (gnl|cdd|29142 : 243.0) no description available & (at5g55090 : 236.0) member of MEKK subfamily; mitogen-activated protein kinase kinase kinase 15 (MAPKKK15); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 16 (TAIR:AT4G26890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 121.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 472.0) & (original description: Putative BnaC08g12350D, Description = BnaC08g12350D protein, PFAM = PF00069)' T '31.2' 'cell.division' 'niben101scf12320_179396-193385' '(at5g19420 : 1556.0) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-related (InterPro:IPR017455), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Pleckstrin homology-type (InterPro:IPR011993), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G12350.1). & (gnl|cdd|34783 : 128.0) no description available & (gnl|cdd|36640 : 121.0) no description available & (reliability: 3112.0) & (original description: Putative PRAF1, Description = Regulator of chromosome condensation and FYVE zinc finger domain-containing protein, PFAM = PF08381;PF00415;PF00415;PF00415;PF00415;PF00415;PF00415;PF13713;PF16457;PF01363;PF16627)' T '31.2' 'cell.division' 'niben101scf13593_14800-20899' '(at3g25100 : 823.0) Required for normal meiosis, may act in the last round of DNA replication prior to meiosis, sequence similar to yeast CDC45; cell division cycle 45 (CDC45); CONTAINS InterPro DOMAIN/s: CDC45-like protein (InterPro:IPR003874); Has 1810 Blast hits to 1657 proteins in 252 species: Archae - 0; Bacteria - 25; Metazoa - 666; Fungi - 449; Plants - 176; Viruses - 35; Other Eukaryotes - 459 (source: NCBI BLink). & (gnl|cdd|37686 : 559.0) no description available & (gnl|cdd|66410 : 308.0) no description available & (reliability: 1646.0) & (original description: Putative CDC45, Description = CDC45 (Cell division cycle 45)-like protein, PFAM = PF02724)' T '31.2' 'cell.division' 'niben101scf17719_469671-478627' '(at5g61960 : 586.0) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML1 is a member of two sister clades of mei2-like gene family, AML1 through AML5 and belongs to the clade named ALM14. AML1 is expressed during early embryo development, particularly along embryonic axis at torpedo stage, in shoot apex (weaker expression) and in the organogenic regions of floral apices.; MEI2-like protein 1 (ML1); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like 4 (TAIR:AT5G07290.1); Has 4583 Blast hits to 4209 proteins in 289 species: Archae - 0; Bacteria - 6; Metazoa - 2486; Fungi - 644; Plants - 914; Viruses - 0; Other Eukaryotes - 533 (source: NCBI BLink). & (gnl|cdd|39859 : 224.0) no description available & (gnl|cdd|67666 : 190.0) no description available & (o65001|te1_maize : 122.0) Protein terminal ear1 - Zea mays (Maize) & (reliability: 1172.0) & (original description: Putative ML4, Description = Protein MEI2-like 4, PFAM = PF04059;PF00076;PF00076)' T '31.2' 'cell.division' 'niben101scf18001_89955-99519' '(at3g48150 : 855.0) anaphase-promoting complex or cyclosome subunit; anaphase-promoting complex subunit 8 (APC8); FUNCTIONS IN: binding; INVOLVED IN: cell cycle, regulation of mitotic metaphase/anaphase transition; LOCATED IN: anaphase-promoting complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Cdc23 (InterPro:IPR007192), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G16320.1); Has 14789 Blast hits to 8989 proteins in 1164 species: Archae - 889; Bacteria - 6197; Metazoa - 2204; Fungi - 825; Plants - 603; Viruses - 0; Other Eukaryotes - 4071 (source: NCBI BLink). & (gnl|cdd|36370 : 612.0) no description available & (gnl|cdd|67657 : 119.0) no description available & (reliability: 1710.0) & (original description: Putative APC8, Description = Anaphase-promoting complex subunit 8, PFAM = PF04049;PF13181;PF13181;PF13414)' T '31.2' 'cell.division' 'niben101scf18745_141204-151108' '(at1g66510 : 498.0) AAR2 protein family; CONTAINS InterPro DOMAIN/s: AAR2 (InterPro:IPR007946); Has 287 Blast hits to 279 proteins in 146 species: Archae - 0; Bacteria - 3; Metazoa - 130; Fungi - 66; Plants - 43; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|39140 : 342.0) no description available & (gnl|cdd|68840 : 330.0) no description available & (reliability: 996.0) & (original description: Putative Sb06g001290, Description = Putative uncharacterized protein Sb06g001290, PFAM = PF05282)' T '31.2' 'cell.division' 'niben101scf25021_40014-43488' '(gnl|cdd|35875 : 147.0) no description available & (at4g37630 : 123.0) core cell cycle genes; cyclin d5;1 (CYCD5;1); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D1;1 (TAIR:AT1G70210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative CYCD5, Description = D5-type cyclin, PFAM = PF02984;PF00134)' T '31.2' 'cell.division' 'niben101scf34081_60111-64819' '(at2g18290 : 291.0) anaphase promoting complex 10 (APC10); INVOLVED IN: regulation of DNA endoreduplication, phloem or xylem histogenesis; LOCATED IN: anaphase-promoting complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Anaphase-promoting complex, subunit 10 (InterPro:IPR004939), Anaphase-promoting complex, subunit 10, subgroup (InterPro:IPR016901), Galactose-binding domain-like (InterPro:IPR008979); Has 552 Blast hits to 552 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 288; Fungi - 144; Plants - 49; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|86284 : 225.0) no description available & (gnl|cdd|38647 : 200.0) no description available & (reliability: 582.0) & (original description: Putative APC10, Description = Anaphase-promoting complex subunit 10, PFAM = PF03256)' T '31.2.5' 'cell.division.plastid' 'nbv0.5scaffold3710_65620-69625' '(at2g21280 : 166.0) A nuclear-encoded, plastid-targeted protein (AtSulA) whose overexpression causes severe yet stochastic plastid (shown in chloroplasts and leucoplasts) division defects. The protein does not appear to interact with either AtFtsZ proteins when studied in a yeast two-hybrid system.; SULA; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: chloroplast fission; LOCATED IN: chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar nucleotide epimerase YfcH, putative (InterPro:IPR010099), NAD-dependent epimerase/dehydratase (InterPro:IPR001509), Domain of unknown function DUF1731, C-terminal (InterPro:IPR013549), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G33360.2); Has 4854 Blast hits to 4853 proteins in 1452 species: Archae - 38; Bacteria - 3329; Metazoa - 111; Fungi - 30; Plants - 185; Viruses - 0; Other Eukaryotes - 1161 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative SULA, Description = Rossmann-fold NAD(P)-binding domain-containing protein, PFAM = PF01370)' T '31.2.5' 'cell.division.plastid' 'niben044scf00000173ctg001_15626-18430' '(at5g24020 : 461.0) Encodes a Ca2+ dependent ATPase required for correct positioning of the chloroplast division apparatus. Its ATPase activity is stimulated by AtMinE1, a topological specificity factor.; MIND; FUNCTIONS IN: calcium-dependent ATPase activity, protein binding, ATPase activity, protein homodimerization activity; INVOLVED IN: chloroplast fission; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Septum site-determining protein MinD (InterPro:IPR010223), Cobyrinic acid a,c-diamide synthase (InterPro:IPR002586); BEST Arabidopsis thaliana protein match is: IND1(iron-sulfur protein required for NADH dehydrogenase)-like (TAIR:AT4G19540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32719 : 280.0) no description available & (gnl|cdd|38232 : 255.0) no description available & (q9mum5|mind_mesvi : 245.0) Putative septum site-determining protein minD - Mesostigma viride & (reliability: 922.0) & (original description: Putative MIND1, Description = Putative septum site-determining protein minD homolog, chloroplastic, PFAM = PF01656)' T '31.2.5' 'cell.division.plastid' 'niben044scf00000769ctg006_1-8815' '(at1g58200 : 610.0) A member of MscS-like gene family, structurally very similar to MSL2, comprising of an N-terminal chloroplast transit peptide, five trans-membrane helices and a C-terminal cytoplasmic domain. Mutant plants showed abnormalities in the size and shape of plastids. MSL3-GFP was localized to discrete foci on the plastid envelope and co-localize with the plastid division protein AtMinE. MSL3 was capable of increasing the osmotic-shock survival of a mutant bacterial strain lacking MS-ion-channel activity.; MSCS-like 3 (MSL3); FUNCTIONS IN: ion channel activity; INVOLVED IN: plastid organization, response to osmotic stress; LOCATED IN: membrane, plastid envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mechanosensitive ion channel MscS (InterPro:IPR006685), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: MSCS-like 2 (TAIR:AT5G10490.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|64773 : 105.0) no description available & (reliability: 1220.0) & (original description: Putative MSL3, Description = Mechanosensitive ion channel protein 3, chloroplastic, PFAM = PF00924)' T '31.2.5' 'cell.division.plastid' 'niben044scf00007938ctg002_9059-18328' '(at2g21280 : 490.0) A nuclear-encoded, plastid-targeted protein (AtSulA) whose overexpression causes severe yet stochastic plastid (shown in chloroplasts and leucoplasts) division defects. The protein does not appear to interact with either AtFtsZ proteins when studied in a yeast two-hybrid system.; SULA; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: chloroplast fission; LOCATED IN: chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar nucleotide epimerase YfcH, putative (InterPro:IPR010099), NAD-dependent epimerase/dehydratase (InterPro:IPR001509), Domain of unknown function DUF1731, C-terminal (InterPro:IPR013549), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G33360.2); Has 4854 Blast hits to 4853 proteins in 1452 species: Archae - 38; Bacteria - 3329; Metazoa - 111; Fungi - 30; Plants - 185; Viruses - 0; Other Eukaryotes - 1161 (source: NCBI BLink). & (gnl|cdd|38229 : 316.0) no description available & (gnl|cdd|31287 : 301.0) no description available & (reliability: 980.0) & (original description: Putative GC1, Description = Epimerase family protein SDR39U1 homolog, chloroplastic, PFAM = PF01370;PF08338)' T '31.2.5' 'cell.division.plastid' 'niben044scf00039008ctg003_1-3088' '(at1g24490 : 128.0) Homologue of the Alb3/Oxa1/YidC family. ALB4 is almost identical to the Alb3/Oxa1/YidC domain of the previously described 110 kDa inner envelope protein ARTEMIS. However, ALB4 is expressed as a separate 55 kDa protein and is located in the thylakoid membrane of chloroplasts. Analysis of a T-DNA insertion line with a reduced level of Alb4 revealed chloroplasts with an altered ultrastructure. Mutant plastids are larger, more spherical in appearance and the grana stacks within the mutant lines are less appressed than in the wild-type chloroplasts. ALB4 is required for proper chloroplast biogenesis.; ALBINA 4 (ALB4); CONTAINS InterPro DOMAIN/s: Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Membrane insertion protein, OxaA/YidC, core (InterPro:IPR020001); BEST Arabidopsis thaliana protein match is: 63 kDa inner membrane family protein (TAIR:AT2G28800.1); Has 8058 Blast hits to 8029 proteins in 2465 species: Archae - 0; Bacteria - 5573; Metazoa - 87; Fungi - 22; Plants - 115; Viruses - 0; Other Eukaryotes - 2261 (source: NCBI BLink). & (q9fy06|ppf1_pea : 127.0) Inner membrane protein PPF-1, chloroplast precursor (Post-floral-specific protein 1) - Pisum sativum (Garden pea) & (gnl|cdd|65847 : 82.6) no description available & (reliability: 256.0) & (original description: Putative ALB, Description = ALBINO3-like protein 1, chloroplastic, PFAM = PF02096)' T '31.2.5' 'cell.division.plastid' 'niben044scf00056840ctg003_2236-11072' '(at1g75010 : 389.0) Encodes ARC3 (Accumulation and Replication of Chloroplast 3), a chloroplast division factor functioning in the initiation of chloroplast division. ARC3 is a chimera of the prokaryotic FtsZ and part of the eukaryotic phosphatidylinositol-4-phosphate 5-kinase (PIP5K). Located on the outer surface of the chloroplast in a ring-like structure at the early stage of chloroplast division. The arc3 mutant has a small number of abnormally large chloroplasts in the cell.; ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 (ARC3); FUNCTIONS IN: GTP binding; INVOLVED IN: plastid organization, chloroplast fission; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cell division protein FtsZ, N-terminal (InterPro:IPR000158), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), MORN motif (InterPro:IPR003409); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT1G60890.1); Has 25195 Blast hits to 11716 proteins in 2589 species: Archae - 74; Bacteria - 8050; Metazoa - 1670; Fungi - 101; Plants - 2147; Viruses - 0; Other Eukaryotes - 13153 (source: NCBI BLink). & (reliability: 778.0) & (original description: Putative ARC3, Description = 1-phosphatidylinositol-4-phosphate 5-kinase, putative isoform 1, PFAM = PF02493;PF02493;PF02493)' T '31.2.5' 'cell.division.plastid' 'niben101scf00276_261999-270248' '(at1g58200 : 616.0) A member of MscS-like gene family, structurally very similar to MSL2, comprising of an N-terminal chloroplast transit peptide, five trans-membrane helices and a C-terminal cytoplasmic domain. Mutant plants showed abnormalities in the size and shape of plastids. MSL3-GFP was localized to discrete foci on the plastid envelope and co-localize with the plastid division protein AtMinE. MSL3 was capable of increasing the osmotic-shock survival of a mutant bacterial strain lacking MS-ion-channel activity.; MSCS-like 3 (MSL3); FUNCTIONS IN: ion channel activity; INVOLVED IN: plastid organization, response to osmotic stress; LOCATED IN: membrane, plastid envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mechanosensitive ion channel MscS (InterPro:IPR006685), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: MSCS-like 2 (TAIR:AT5G10490.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|64773 : 106.0) no description available & (reliability: 1232.0) & (original description: Putative MSL3, Description = Mechanosensitive ion channel protein 3, chloroplastic, PFAM = PF00924)' T '31.2.5' 'cell.division.plastid' 'niben101scf00530_291189-298912' '(at5g53280 : 214.0) An integral outer envelope membrane protein (as its homolog PDV2), component of the plastid division machinery. Similar to ARC5, PDV1 localized to a discontinuous ring at the division site in wild-type plants. PDV1 and PDV2 are required for localization of ARC5 at the chloroplast division site. Topological analysis showed that the large N-terminal region of PDV1 upstream of the transmembrane helix bearing a putative coiled-coil domain is exposed to the cytosol. Mutation of the conserved PDV1 C-terminal Gly residue did not block PDV1 insertion into the outer envelope membrane but did abolish its localization to the division site.; PLASTID DIVISION1 (PDV1); BEST Arabidopsis thaliana protein match is: plastid division2 (TAIR:AT2G16070.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative PDV1, Description = Plastid division protein PDV1, PFAM = )' T '31.2.5' 'cell.division.plastid' 'niben101scf02511_201155-210591' '(at5g53280 : 214.0) An integral outer envelope membrane protein (as its homolog PDV2), component of the plastid division machinery. Similar to ARC5, PDV1 localized to a discontinuous ring at the division site in wild-type plants. PDV1 and PDV2 are required for localization of ARC5 at the chloroplast division site. Topological analysis showed that the large N-terminal region of PDV1 upstream of the transmembrane helix bearing a putative coiled-coil domain is exposed to the cytosol. Mutation of the conserved PDV1 C-terminal Gly residue did not block PDV1 insertion into the outer envelope membrane but did abolish its localization to the division site.; PLASTID DIVISION1 (PDV1); BEST Arabidopsis thaliana protein match is: plastid division2 (TAIR:AT2G16070.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative PDV1, Description = Plastid division protein PDV1, PFAM = )' T '31.2.5' 'cell.division.plastid' 'niben101scf02949_11154-18237' '(at1g24490 : 437.0) Homologue of the Alb3/Oxa1/YidC family. ALB4 is almost identical to the Alb3/Oxa1/YidC domain of the previously described 110 kDa inner envelope protein ARTEMIS. However, ALB4 is expressed as a separate 55 kDa protein and is located in the thylakoid membrane of chloroplasts. Analysis of a T-DNA insertion line with a reduced level of Alb4 revealed chloroplasts with an altered ultrastructure. Mutant plastids are larger, more spherical in appearance and the grana stacks within the mutant lines are less appressed than in the wild-type chloroplasts. ALB4 is required for proper chloroplast biogenesis.; ALBINA 4 (ALB4); CONTAINS InterPro DOMAIN/s: Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Membrane insertion protein, OxaA/YidC, core (InterPro:IPR020001); BEST Arabidopsis thaliana protein match is: 63 kDa inner membrane family protein (TAIR:AT2G28800.1); Has 8058 Blast hits to 8029 proteins in 2465 species: Archae - 0; Bacteria - 5573; Metazoa - 87; Fungi - 22; Plants - 115; Viruses - 0; Other Eukaryotes - 2261 (source: NCBI BLink). & (q9fy06|ppf1_pea : 398.0) Inner membrane protein PPF-1, chloroplast precursor (Post-floral-specific protein 1) - Pisum sativum (Garden pea) & (gnl|cdd|65847 : 206.0) no description available & (gnl|cdd|36453 : 180.0) no description available & (reliability: 874.0) & (original description: Putative ALB3L1, Description = ALBINO3-like protein 1, chloroplastic, PFAM = PF02096)' T '31.2.5' 'cell.division.plastid' 'niben101scf03105_138150-148336' '(at5g10490 : 701.0) A member of MscS-like gene family, structurally very similar to MSL3, comprising of an N-terminal chloroplast transit peptide, five trans-membrane helices and a C-terminal cytoplasmic domain. Mutant plants showed abnormalities in the size and shape of plastids. MSL2-GFP was localized to discrete foci on the plastid envelope and co-localize with the plastid division protein AtMinE.; MSCS-like 2 (MSL2); CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920), Mechanosensitive ion channel MscS (InterPro:IPR006685); BEST Arabidopsis thaliana protein match is: MSCS-like 3 (TAIR:AT1G58200.2). & (gnl|cdd|64773 : 102.0) no description available & (reliability: 1402.0) & (original description: Putative MSL2, Description = Mechanosensitive ion channel protein 2, chloroplastic, PFAM = PF00924)' T '31.2.5' 'cell.division.plastid' 'niben101scf03114_713756-716745' '(at5g24020 : 462.0) Encodes a Ca2+ dependent ATPase required for correct positioning of the chloroplast division apparatus. Its ATPase activity is stimulated by AtMinE1, a topological specificity factor.; MIND; FUNCTIONS IN: calcium-dependent ATPase activity, protein binding, ATPase activity, protein homodimerization activity; INVOLVED IN: chloroplast fission; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Septum site-determining protein MinD (InterPro:IPR010223), Cobyrinic acid a,c-diamide synthase (InterPro:IPR002586); BEST Arabidopsis thaliana protein match is: IND1(iron-sulfur protein required for NADH dehydrogenase)-like (TAIR:AT4G19540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32719 : 280.0) no description available & (gnl|cdd|38232 : 256.0) no description available & (q9mum5|mind_mesvi : 245.0) Putative septum site-determining protein minD - Mesostigma viride & (reliability: 924.0) & (original description: Putative MIND1, Description = Putative septum site-determining protein minD homolog, chloroplastic, PFAM = PF01656)' T '31.2.5' 'cell.division.plastid' 'niben101scf03924_57917-63330' '(at1g69390 : 231.0) Encodes an Arabidopsis homologue of the bacterial MinE topological specificity factor ensuring correct division site placement. It is an essential integral component of the plastid division machinery.; homologue of bacterial MinE 1 (MINE1); CONTAINS InterPro DOMAIN/s: Septum formation topological specificity factor MinE (InterPro:IPR005527); Has 203 Blast hits to 203 proteins in 86 species: Archae - 0; Bacteria - 126; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative minE, Description = MinE protein, PFAM = PF03776)' T '31.2.5' 'cell.division.plastid' 'niben101scf09010_182116-191179' '(at2g21280 : 535.0) A nuclear-encoded, plastid-targeted protein (AtSulA) whose overexpression causes severe yet stochastic plastid (shown in chloroplasts and leucoplasts) division defects. The protein does not appear to interact with either AtFtsZ proteins when studied in a yeast two-hybrid system.; SULA; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: chloroplast fission; LOCATED IN: chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar nucleotide epimerase YfcH, putative (InterPro:IPR010099), NAD-dependent epimerase/dehydratase (InterPro:IPR001509), Domain of unknown function DUF1731, C-terminal (InterPro:IPR013549), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G33360.2); Has 4854 Blast hits to 4853 proteins in 1452 species: Archae - 38; Bacteria - 3329; Metazoa - 111; Fungi - 30; Plants - 185; Viruses - 0; Other Eukaryotes - 1161 (source: NCBI BLink). & (gnl|cdd|38229 : 342.0) no description available & (gnl|cdd|31287 : 337.0) no description available & (reliability: 1070.0) & (original description: Putative GC1, Description = Epimerase family protein SDR39U1 homolog, chloroplastic, PFAM = PF08338;PF01370)' T '31.2.5' 'cell.division.plastid' 'niben101scf10516_73626-96377' '(at1g75010 : 483.0) Encodes ARC3 (Accumulation and Replication of Chloroplast 3), a chloroplast division factor functioning in the initiation of chloroplast division. ARC3 is a chimera of the prokaryotic FtsZ and part of the eukaryotic phosphatidylinositol-4-phosphate 5-kinase (PIP5K). Located on the outer surface of the chloroplast in a ring-like structure at the early stage of chloroplast division. The arc3 mutant has a small number of abnormally large chloroplasts in the cell.; ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 (ARC3); FUNCTIONS IN: GTP binding; INVOLVED IN: plastid organization, chloroplast fission; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cell division protein FtsZ, N-terminal (InterPro:IPR000158), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), MORN motif (InterPro:IPR003409); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT1G60890.1); Has 25195 Blast hits to 11716 proteins in 2589 species: Archae - 74; Bacteria - 8050; Metazoa - 1670; Fungi - 101; Plants - 2147; Viruses - 0; Other Eukaryotes - 13153 (source: NCBI BLink). & (reliability: 966.0) & (original description: Putative ARC3, Description = Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, PFAM = PF02493;PF02493)' T '31.2.5' 'cell.division.plastid' 'niben101scf12680_298860-308039' '(at1g24490 : 437.0) Homologue of the Alb3/Oxa1/YidC family. ALB4 is almost identical to the Alb3/Oxa1/YidC domain of the previously described 110 kDa inner envelope protein ARTEMIS. However, ALB4 is expressed as a separate 55 kDa protein and is located in the thylakoid membrane of chloroplasts. Analysis of a T-DNA insertion line with a reduced level of Alb4 revealed chloroplasts with an altered ultrastructure. Mutant plastids are larger, more spherical in appearance and the grana stacks within the mutant lines are less appressed than in the wild-type chloroplasts. ALB4 is required for proper chloroplast biogenesis.; ALBINA 4 (ALB4); CONTAINS InterPro DOMAIN/s: Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Membrane insertion protein, OxaA/YidC, core (InterPro:IPR020001); BEST Arabidopsis thaliana protein match is: 63 kDa inner membrane family protein (TAIR:AT2G28800.1); Has 8058 Blast hits to 8029 proteins in 2465 species: Archae - 0; Bacteria - 5573; Metazoa - 87; Fungi - 22; Plants - 115; Viruses - 0; Other Eukaryotes - 2261 (source: NCBI BLink). & (q9fy06|ppf1_pea : 396.0) Inner membrane protein PPF-1, chloroplast precursor (Post-floral-specific protein 1) - Pisum sativum (Garden pea) & (gnl|cdd|65847 : 206.0) no description available & (gnl|cdd|36453 : 179.0) no description available & (reliability: 874.0) & (original description: Putative ALB3L1, Description = ALBINO3-like protein 1, chloroplastic, PFAM = PF02096)' T '31.3' 'cell.cycle' 'nbv0.3scaffold1539_64327-68412' '(at5g43080 : 397.0) Cyclin A3;1 (CYCA3;1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin (InterPro:IPR006670), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: cyclin-dependent protein kinase 3;2 (TAIR:AT1G47210.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p25010|ccnal_dauca : 381.0) G2/mitotic-specific cyclin C13-1 (A-like cyclin) (Fragment) - Daucus carota (Carrot) & (gnl|cdd|35873 : 293.0) no description available & (gnl|cdd|34629 : 163.0) no description available & (reliability: 794.0) & (original description: Putative cycA3, Description = CycA3, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'nbv0.3scaffold2795_61700-77489' '(at1g53720 : 394.0) Encodes a cyclophilin, member of a family modular proteins consisting of a peptidyl-prolyl cisñ trans isomerase (PPIase) domain, followed by an RNA recognition motif (RRM), and a C-terminal domain enriched in charged amino acids. Interacts with with SCL33/SR33 and with a majority of Arabidopsis SR proteins and the largest subunit of RNA polymerase II. Localizes to the nucleus, but it does not significantly colocalize with SR proteins in nuclear speckles.; cyclophilin 59 (CYP59); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity, RNA binding, nucleic acid binding; INVOLVED IN: protein folding; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: peptidyl-prolyl cis-trans isomerases;hydrolases;nucleoside-triphosphatases;ATP binding;nucleotide binding;ATPases (TAIR:AT1G53780.2); Has 61647 Blast hits to 39757 proteins in 2942 species: Archae - 163; Bacteria - 9741; Metazoa - 25019; Fungi - 7217; Plants - 5688; Viruses - 226; Other Eukaryotes - 13593 (source: NCBI BLink). & (gnl|cdd|35636 : 294.0) no description available & (gnl|cdd|29392 : 114.0) no description available & (reliability: 788.0) & (original description: Putative cyp13, Description = Peptidyl-prolyl cis-trans isomerase-like 4, PFAM = PF00076;PF00098;PF00160)' T '31.3' 'cell.cycle' 'nbv0.3scaffold5495_42038-44743' '(at2g01905 : 207.0) cyclin J18 (cycJ18); cyclin J18 (CYCJ18); CONTAINS InterPro DOMAIN/s: Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative CYCJ18, Description = Cyclin-J18, PFAM = PF00134)' T '31.3' 'cell.cycle' 'nbv0.3scaffold6593_52905-59155' '(at4g22910 : 653.0) FIZZY-related 2 (FZR2); FUNCTIONS IN: signal transducer activity; INVOLVED IN: trichome branching, signal transduction, DNA endoreduplication, cell growth; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: cell cycle switch protein 52 A2 (TAIR:AT4G11920.1); Has 43458 Blast hits to 22953 proteins in 693 species: Archae - 46; Bacteria - 6865; Metazoa - 16440; Fungi - 9775; Plants - 5102; Viruses - 0; Other Eukaryotes - 5230 (source: NCBI BLink). & (gnl|cdd|35526 : 474.0) no description available & (gnl|cdd|29257 : 137.0) no description available & (reliability: 1306.0) & (original description: Putative FZR2, Description = Protein FIZZY-RELATED 2, PFAM = PF12894;PF00400;PF00400;PF00400)' T '31.3' 'cell.cycle' 'nbv0.3scaffold10735_13209-17873' '(at1g20610 : 454.0) Cyclin B2;3 (CYCB2;3); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN B2;4 (TAIR:AT1G76310.1); Has 4405 Blast hits to 4396 proteins in 374 species: Archae - 0; Bacteria - 7; Metazoa - 2039; Fungi - 549; Plants - 1150; Viruses - 30; Other Eukaryotes - 630 (source: NCBI BLink). & (q40671|ccnb2_orysa : 422.0) G2/mitotic-specific cyclin-2 (B-like cyclin) (CycOs2) - Oryza sativa (Rice) & (gnl|cdd|35872 : 270.0) no description available & (gnl|cdd|34629 : 196.0) no description available & (reliability: 908.0) & (original description: Putative cyc1, Description = CycB2, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'nbv0.3scaffold15084_5710-10684' '(at5g48820 : 130.0) Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. Binds to D type and CDC2A cyclins and may inhibit cell cycle. Seven KRP genes were found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization.; inhibitor/interactor with cyclin-dependent kinase (ICK6); CONTAINS InterPro DOMAIN/s: Cyclin-dependent kinase inhibitor (InterPro:IPR003175), Cyclin-dependent kinase inhibitor, plant (InterPro:IPR016701); BEST Arabidopsis thaliana protein match is: Cyclin-dependent kinase inhibitor family protein (TAIR:AT3G24810.1). & (reliability: 260.0) & (original description: Putative krp1, Description = P27KIP1-related-protein 1, PFAM = PF02234)' T '31.3' 'cell.cycle' 'nbv0.3scaffold18880_13075-33699' '(at3g18730 : 924.0) Encodes a protein with an important role in cell division control and plant morphogenesis and may also play a role in genome maintenance. May be involved in mitosis through interaction with TSA1. In cells synchronized for cell division, TSA1 and TSK relocalize to ends of spindle microtubules that are ahead of separating chromatids during metaphase and anaphase of mitosis.; TONSOKU (TSK); FUNCTIONS IN: protein binding; INVOLVED IN: G2/M transition of mitotic cell cycle, meristem structural organization, regulation of meristem structural organization, cell division; LOCATED IN: nucleus, membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat (InterPro:IPR019734); Has 6425 Blast hits to 3886 proteins in 382 species: Archae - 66; Bacteria - 1534; Metazoa - 3543; Fungi - 23; Plants - 266; Viruses - 0; Other Eukaryotes - 993 (source: NCBI BLink). & (reliability: 1848.0) & (original description: Putative TSK, Description = Protein TONSOKU, PFAM = PF13424;PF13424;PF13176;PF13181;PF13516)' T '31.3' 'cell.cycle' 'nbv0.3scaffold21421_27767-31816' '(at4g19600 : 158.0) Encodes a cyclin T partner CYCT1;4. Plays important roles in infection with Cauliflower mosaic virus (CaMV).; CYCT1;4; FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle, response to virus, trichome morphogenesis, leaf development; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Transcription regulator cyclin (InterPro:IPR015429), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G45190.1); Has 2421 Blast hits to 2391 proteins in 275 species: Archae - 2; Bacteria - 35; Metazoa - 1157; Fungi - 528; Plants - 373; Viruses - 0; Other Eukaryotes - 326 (source: NCBI BLink). & (gnl|cdd|36052 : 148.0) no description available & (reliability: 316.0) & (original description: Putative CYCT1, Description = CycT1, PFAM = PF00134)' T '31.3' 'cell.cycle' 'nbv0.3scaffold31133_5329-10440' '(p34800|ccn1_antma : 505.0) G2/mitotic-specific cyclin-1 - Antirrhinum majus (Garden snapdragon) & (at2g26760 : 391.0) Cyclin B1;4 (CYCB1;4); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN B1;3 (TAIR:AT3G11520.1); Has 4222 Blast hits to 4221 proteins in 367 species: Archae - 0; Bacteria - 0; Metazoa - 1981; Fungi - 552; Plants - 1040; Viruses - 34; Other Eukaryotes - 615 (source: NCBI BLink). & (gnl|cdd|35872 : 280.0) no description available & (gnl|cdd|34629 : 195.0) no description available & (reliability: 782.0) & (original description: Putative cyc1, Description = CycB1, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'nbv0.3scaffold36585_16501-21118' '(at1g76310 : 484.0) core cell cycle genes; CYCLIN B2;4 (CYCB2;4); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin B2;3 (TAIR:AT1G20610.1); Has 4261 Blast hits to 4252 proteins in 371 species: Archae - 0; Bacteria - 0; Metazoa - 1989; Fungi - 541; Plants - 1112; Viruses - 30; Other Eukaryotes - 589 (source: NCBI BLink). & (p30278|ccnb2_medsa : 408.0) G2/mitotic-specific cyclin-2 (B-like cyclin) (CycMs2) (Fragment) - Medicago sativa (Alfalfa) & (gnl|cdd|35872 : 274.0) no description available & (gnl|cdd|34629 : 189.0) no description available & (reliability: 968.0) & (original description: Putative cycb1, Description = CycB2, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'nbv0.3scaffold38003_13644-40388' '(at5g40820 : 1543.0) Encodes a Arabidopsis ortholog of the ATR protein kinase that is involved in a wide range of responses to DNA damage and plays a central role in cell-cycle regulation. Dominant loss of function alleles identified as suppressors of ALS also exhibit increased tolerance to aluminum. This may be due to the inhibition of terminal differentiation of the root apex upon exposure to Al.; Ataxia telangiectasia-mutated and RAD3-related (ATR); FUNCTIONS IN: protein serine/threonine kinase activity, inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: in 9 processes; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), UME (InterPro:IPR012993), Protein kinase-like domain (InterPro:IPR011009), PIK-related kinase, FAT (InterPro:IPR003151), Armadillo-type fold (InterPro:IPR016024), PIK-related kinase (InterPro:IPR014009), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), PIK-related kinase, FATC (InterPro:IPR003152); BEST Arabidopsis thaliana protein match is: ataxia-telangiectasia mutated (TAIR:AT3G48190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5z987|atr_orysa : 1516.0) Serine/threonine-protein kinase ATR (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|36108 : 989.0) no description available & (gnl|cdd|73241 : 352.0) no description available & (reliability: 3086.0) & (original description: Putative ATR, Description = Serine/threonine-protein kinase ATR, PFAM = PF02260;PF00454;PF08064;PF02259)' T '31.3' 'cell.cycle' 'nbv0.3scaffold40332_14210-18488' '(at5g48820 : 130.0) Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. Binds to D type and CDC2A cyclins and may inhibit cell cycle. Seven KRP genes were found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization.; inhibitor/interactor with cyclin-dependent kinase (ICK6); CONTAINS InterPro DOMAIN/s: Cyclin-dependent kinase inhibitor (InterPro:IPR003175), Cyclin-dependent kinase inhibitor, plant (InterPro:IPR016701); BEST Arabidopsis thaliana protein match is: Cyclin-dependent kinase inhibitor family protein (TAIR:AT3G24810.1). & (reliability: 260.0) & (original description: Putative krp2, Description = P27KIP1-related-protein 2, PFAM = PF02234)' T '31.3' 'cell.cycle' 'nbv0.3scaffold41678_10005-18298' '(at2g01120 : 549.0) Origin Recognition Complex subunit 4. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with all ORC subunits except ORC1b.; origin recognition complex subunit 4 (ORC4); CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), Origin recognition complex, subunit 4 (InterPro:IPR016527). & (gnl|cdd|37439 : 224.0) no description available & (reliability: 1098.0) & (original description: Putative ORC4, Description = Origin of replication complex subunit 4, PFAM = PF00004;PF14629)' T '31.3' 'cell.cycle' 'nbv0.3scaffold41995_8953-15967' '(at1g03780 : 578.0) Homolog of vertebrate TPX2. Protein has three domains involved in nuclear targeting, one in nuclear export and two in microtubule binding. Involved in mitotic spindle assembly during late prophase and early prometaphase.; targeting protein for XKLP2 (TPX2); FUNCTIONS IN: microtubule binding; INVOLVED IN: spindle assembly; LOCATED IN: nucleus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cell cycle regulated microtubule associated protein (InterPro:IPR022021), Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT5G44270.1). & (reliability: 1156.0) & (original description: Putative TPX2, Description = Protein TPX2, PFAM = PF06886;PF12214)' T '31.3' 'cell.cycle' 'nbv0.3scaffold43081_3810-17042' '(at1g70620 : 120.0) cyclin-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 240.0) & (original description: Putative , Description = Putative histone-lysine N-methyltransferase SETD1B-A-like, PFAM = PF15996)' T '31.3' 'cell.cycle' 'nbv0.3scaffold47519_4909-16020' '(at5g45190 : 448.0) Encodes a cyclin T partner CYCT1;5. Plays important roles in infection with Cauliflower mosaic virus (CaMV).; Cyclin family protein; FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Transcription regulator cyclin (InterPro:IPR015429), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT4G19600.1); Has 4079 Blast hits to 3698 proteins in 345 species: Archae - 2; Bacteria - 149; Metazoa - 1860; Fungi - 545; Plants - 474; Viruses - 8; Other Eukaryotes - 1041 (source: NCBI BLink). & (gnl|cdd|36052 : 319.0) no description available & (gnl|cdd|34912 : 151.0) no description available & (p93411|ccnc_orysa : 87.4) G1/S-specific cyclin C-type - Oryza sativa (Rice) & (reliability: 896.0) & (original description: Putative cycK, Description = CycT1, PFAM = PF00134)' T '31.3' 'cell.cycle' 'nbv0.3scaffold47519_8946-14509' '(at4g19600 : 270.0) Encodes a cyclin T partner CYCT1;4. Plays important roles in infection with Cauliflower mosaic virus (CaMV).; CYCT1;4; FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle, response to virus, trichome morphogenesis, leaf development; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Transcription regulator cyclin (InterPro:IPR015429), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G45190.1); Has 2421 Blast hits to 2391 proteins in 275 species: Archae - 2; Bacteria - 35; Metazoa - 1157; Fungi - 528; Plants - 373; Viruses - 0; Other Eukaryotes - 326 (source: NCBI BLink). & (gnl|cdd|36052 : 184.0) no description available & (gnl|cdd|34912 : 103.0) no description available & (reliability: 540.0) & (original description: Putative CYCT, Description = CycT1, PFAM = PF00134)' T '31.3' 'cell.cycle' 'nbv0.3scaffold47600_2472-9710' '(at1g14750 : 226.0) Encodes a meiotic cyclin-like protein, distinct from all other known Arabidopsis cyclins. It is not required for meiotic DSB formation but is necessary for meiotic DSB repair via the homologous chromosome.; SOLO DANCERS (SDS); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: chiasma assembly, regulation of cell cycle, double-strand break repair via homologous recombination; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: shoot apex, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G06150.1); Has 3409 Blast hits to 3403 proteins in 338 species: Archae - 0; Bacteria - 0; Metazoa - 1595; Fungi - 422; Plants - 957; Viruses - 3; Other Eukaryotes - 432 (source: NCBI BLink). & (gnl|cdd|35872 : 93.3) no description available & (p30278|ccnb2_medsa : 85.9) G2/mitotic-specific cyclin-2 (B-like cyclin) (CycMs2) (Fragment) - Medicago sativa (Alfalfa) & (reliability: 452.0) & (original description: Putative SDS, Description = Cyclin-SDS, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'nbv0.3scaffold53623_95-9919' '(q38772|cdc2a_antma : 542.0) Cell division control protein 2 homolog A (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (at3g48750 : 500.0) A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase.; cell division control 2 (CDC2); FUNCTIONS IN: protein binding, protein kinase activity, cyclin-dependent protein kinase activity, kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B1;2 (TAIR:AT2G38620.2); Has 126125 Blast hits to 124135 proteins in 4221 species: Archae - 112; Bacteria - 14002; Metazoa - 46757; Fungi - 13170; Plants - 30525; Viruses - 484; Other Eukaryotes - 21075 (source: NCBI BLink). & (gnl|cdd|35814 : 413.0) no description available & (gnl|cdd|29142 : 282.0) no description available & (reliability: 1000.0) & (original description: Putative cdc2, Description = Cdc2 protein, PFAM = PF00069)' T '31.3' 'cell.cycle' 'nbv0.3scaffold56329_1-12796' '(at3g05327 : 176.0) Cyclin family protein; CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin-related 2 (InterPro:IPR013922); BEST Arabidopsis thaliana protein match is: cyclin p4;1 (TAIR:AT2G44740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36887 : 135.0) no description available & (gnl|cdd|72038 : 107.0) no description available & (reliability: 352.0) & (original description: Putative 1, Description = Cyclin-like protein, PFAM = PF08613)' T '31.3' 'cell.cycle' 'nbv0.3scaffold60801_2113-11694' '(at2g41830 : 842.0) Uncharacterized protein; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: Uncharacterized protein (TAIR:AT5G21080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37088 : 328.0) no description available & (reliability: 1684.0) & (original description: Putative At2g41830, Description = BnaC04g02200D protein, PFAM = )' T '31.3' 'cell.cycle' 'nbv0.3scaffold85940_1585-5714' '(at5g45190 : 258.0) Encodes a cyclin T partner CYCT1;5. Plays important roles in infection with Cauliflower mosaic virus (CaMV).; Cyclin family protein; FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Transcription regulator cyclin (InterPro:IPR015429), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT4G19600.1); Has 4079 Blast hits to 3698 proteins in 345 species: Archae - 2; Bacteria - 149; Metazoa - 1860; Fungi - 545; Plants - 474; Viruses - 8; Other Eukaryotes - 1041 (source: NCBI BLink). & (gnl|cdd|36052 : 172.0) no description available & (gnl|cdd|34912 : 88.1) no description available & (reliability: 516.0) & (original description: Putative cycK, Description = CycT1, PFAM = )' T '31.3' 'cell.cycle' 'nbv0.3scaffold94129_1-3752' '(p34800|ccn1_antma : 507.0) G2/mitotic-specific cyclin-1 - Antirrhinum majus (Garden snapdragon) & (at5g06150 : 400.0) Encodes a cyclin whose expression is reduced in response to high salt.; CYC1BAT; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN B1;3 (TAIR:AT3G11520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35872 : 274.0) no description available & (gnl|cdd|34629 : 182.0) no description available & (reliability: 800.0) & (original description: Putative cyc1, Description = CycB1, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'nbv0.3scaffold99281_145-4131' '(at4g28980 : 552.0) Encodes a CDK-activating kinase that regulates root initial cell differentiation. Phosphorylates CDKD2 and CDKD3, but not CDKD1. Controls CDK activities and basal transcription.; CDK-activating kinase 1AT (CAK1AT); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase D1;3 (TAIR:AT1G18040.1); Has 87352 Blast hits to 72841 proteins in 3452 species: Archae - 58; Bacteria - 8929; Metazoa - 34591; Fungi - 11921; Plants - 15740; Viruses - 134; Other Eukaryotes - 15979 (source: NCBI BLink). & (gnl|cdd|35814 : 160.0) no description available & (gnl|cdd|29142 : 147.0) no description available & (p29620|kc47_orysa : 119.0) CDC2+/CDC28-related protein kinase R2 (EC 2.7.11.22) - Oryza sativa (Rice) & (reliability: 1104.0) & (original description: Putative ccrk, Description = Cyclin-dependent kinase F-1, PFAM = PF00069;PF00069)' T '31.3' 'cell.cycle' 'nbv0.5scaffold368_190939-207809' '(at1g16330 : 381.0) core cell cycle genes; cyclin b3;1 (CYCB3;1); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin B2;3 (TAIR:AT1G20610.1); Has 4427 Blast hits to 4424 proteins in 376 species: Archae - 0; Bacteria - 0; Metazoa - 2128; Fungi - 557; Plants - 1053; Viruses - 34; Other Eukaryotes - 655 (source: NCBI BLink). & (p30278|ccnb2_medsa : 229.0) G2/mitotic-specific cyclin-2 (B-like cyclin) (CycMs2) (Fragment) - Medicago sativa (Alfalfa) & (gnl|cdd|35872 : 193.0) no description available & (gnl|cdd|84548 : 151.0) no description available & (reliability: 762.0) & (original description: Putative cycb, Description = Cyclin B2, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'nbv0.5scaffold630_607898-613337' '(at3g05327 : 170.0) Cyclin family protein; CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin-related 2 (InterPro:IPR013922); BEST Arabidopsis thaliana protein match is: cyclin p4;1 (TAIR:AT2G44740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36887 : 134.0) no description available & (gnl|cdd|72038 : 106.0) no description available & (reliability: 340.0) & (original description: Putative 1, Description = Cyclin p4, PFAM = PF08613)' T '31.3' 'cell.cycle' 'nbv0.5scaffold885_317097-320972' '(at3g05330 : 174.0) Encodes a protein with moderate sequence similarity to the maize microtubule-binding protein TANGLED1. A single base-pair deletion (-A) at position Chr3:1519176 in Columbia relative to the Landsberg erecta and Achkarren-2 ecotype (see ESTs DR378436 and CB26450) introduces a frame-shift and premature termination codon. The protein encoded from the Columbia gene is truncated by 29 amino acids relative to the Landsberg erecta and Achkarren-2 encoded proteins. Involved in the identification of the division plane during mitosis amd cytokinesis; TANGLED (ATN); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytokinesis, initiation of separation, phragmoplast assembly; LOCATED IN: microtubule associated complex, preprophase band; EXPRESSED IN: cultured cell; Has 705 Blast hits to 473 proteins in 108 species: Archae - 0; Bacteria - 3; Metazoa - 504; Fungi - 31; Plants - 75; Viruses - 28; Other Eukaryotes - 64 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative TAN1, Description = Microtubule-binding protein TANGLED1, PFAM = )' T '31.3' 'cell.cycle' 'nbv0.5scaffold885_532001-535998' '(at5g27620 : 150.0) core cell cycle genes; cyclin H;1 (CYCH;1); CONTAINS InterPro DOMAIN/s: Cyclin H (InterPro:IPR015432), Cyclin-like (InterPro:IPR011028), Transcription regulator cyclin (InterPro:IPR015429), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G48640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37707 : 90.8) no description available & (reliability: 300.0) & (original description: Putative CYCH1, Description = Cyclin-H1-1, PFAM = PF16899)' T '31.3' 'cell.cycle' 'nbv0.5scaffold902_336916-341416' '(at2g42260 : 145.0) Encodes a novel plant-specific protein of unknown function. The UVI4 gene is expressed mainly in actively dividing cells. The hypocotyl cells in mutant seedlings undergo one extra round of endoreduplication. The uvi4 mutation also promoted the progression of endo-reduplication during leaf development.; UV-B-INSENSITIVE 4 (UVI4); BEST Arabidopsis thaliana protein match is: UV-B-insensitive 4-like (TAIR:AT3G57860.1); Has 62 Blast hits to 62 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative PYM, Description = Protein POLYCHOME, PFAM = )' T '31.3' 'cell.cycle' 'nbv0.5scaffold1408_152825-157479' '(at1g05960 : 271.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Uncharacterized protein (TAIR:AT2G41830.1); Has 335 Blast hits to 327 proteins in 101 species: Archae - 0; Bacteria - 6; Metazoa - 143; Fungi - 47; Plants - 128; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37088 : 208.0) no description available & (reliability: 536.0) & (original description: Putative umc2615, Description = BnaC04g02200D protein, PFAM = )' T '31.3' 'cell.cycle' 'nbv0.5scaffold1481_79286-338229' '(at2g01120 : 550.0) Origin Recognition Complex subunit 4. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with all ORC subunits except ORC1b.; origin recognition complex subunit 4 (ORC4); CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), Origin recognition complex, subunit 4 (InterPro:IPR016527). & (gnl|cdd|37439 : 224.0) no description available & (reliability: 1100.0) & (original description: Putative PGSC0003DMG401030517, Description = Origin recognition complex subunit 4, PFAM = PF14629;PF00004)' T '31.3' 'cell.cycle' 'nbv0.5scaffold1490_75914-104836' '(gnl|cdd|35875 : 168.0) no description available & (at5g02110 : 128.0) CYCLIN D7;1 (CYCD7;1); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;2 (TAIR:AT5G67260.1); Has 2441 Blast hits to 2441 proteins in 290 species: Archae - 0; Bacteria - 0; Metazoa - 935; Fungi - 354; Plants - 916; Viruses - 0; Other Eukaryotes - 236 (source: NCBI BLink). & (gnl|cdd|84548 : 92.6) no description available & (reliability: 256.0) & (original description: Putative CYCD7, Description = D7-type cyclin, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'nbv0.5scaffold1490_76712-79929' '(gnl|cdd|35875 : 143.0) no description available & (at5g02110 : 108.0) CYCLIN D7;1 (CYCD7;1); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;2 (TAIR:AT5G67260.1); Has 2441 Blast hits to 2441 proteins in 290 species: Archae - 0; Bacteria - 0; Metazoa - 935; Fungi - 354; Plants - 916; Viruses - 0; Other Eukaryotes - 236 (source: NCBI BLink). & (gnl|cdd|84548 : 90.7) no description available & (reliability: 216.0) & (original description: Putative 1, Description = D7-type cyclin, PFAM = PF00134)' T '31.3' 'cell.cycle' 'nbv0.5scaffold2254_192145-208966' '(at2g41830 : 991.0) Uncharacterized protein; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: Uncharacterized protein (TAIR:AT5G21080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37088 : 447.0) no description available & (reliability: 1982.0) & (original description: Putative TCM_024710, Description = Uncharacterized protein isoform 1, PFAM = )' T '31.3' 'cell.cycle' 'nbv0.5scaffold2331_252741-262624' '(at4g19600 : 266.0) Encodes a cyclin T partner CYCT1;4. Plays important roles in infection with Cauliflower mosaic virus (CaMV).; CYCT1;4; FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle, response to virus, trichome morphogenesis, leaf development; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Transcription regulator cyclin (InterPro:IPR015429), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G45190.1); Has 2421 Blast hits to 2391 proteins in 275 species: Archae - 2; Bacteria - 35; Metazoa - 1157; Fungi - 528; Plants - 373; Viruses - 0; Other Eukaryotes - 326 (source: NCBI BLink). & (gnl|cdd|36052 : 185.0) no description available & (gnl|cdd|34912 : 106.0) no description available & (reliability: 532.0) & (original description: Putative CYCT, Description = CycT1, PFAM = PF00134)' T '31.3' 'cell.cycle' 'nbv0.5scaffold2675_199890-202436' '(at3g05480 : 90.5) Involved in the regulation of DNA damage repair and homologous recombination.; RAD9; CONTAINS InterPro DOMAIN/s: Rad9 (InterPro:IPR007268), Cell cycle checkpoint, RAD9 (InterPro:IPR016552). & (reliability: 181.0) & (original description: Putative RAD9, Description = DNA damage repair protein RAD9, PFAM = )' T '31.3' 'cell.cycle' 'nbv0.5scaffold3028_95188-113896' '(at3g05480 : 486.0) Involved in the regulation of DNA damage repair and homologous recombination.; RAD9; CONTAINS InterPro DOMAIN/s: Rad9 (InterPro:IPR007268), Cell cycle checkpoint, RAD9 (InterPro:IPR016552). & (gnl|cdd|38021 : 232.0) no description available & (gnl|cdd|86559 : 205.0) no description available & (reliability: 972.0) & (original description: Putative RAD9, Description = DNA damage repair protein RAD9, PFAM = PF04139)' T '31.3' 'cell.cycle' 'nbv0.5scaffold3291_106671-200908' '(at5g27620 : 214.0) core cell cycle genes; cyclin H;1 (CYCH;1); CONTAINS InterPro DOMAIN/s: Cyclin H (InterPro:IPR015432), Cyclin-like (InterPro:IPR011028), Transcription regulator cyclin (InterPro:IPR015429), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G48640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37707 : 133.0) no description available & (gnl|cdd|34912 : 93.1) no description available & (reliability: 428.0) & (original description: Putative adh1C, Description = Cyclin-H1-1, PFAM = PF00134)' T '31.3' 'cell.cycle' 'nbv0.5scaffold3675_56187-66778' '(p34800|ccn1_antma : 437.0) G2/mitotic-specific cyclin-1 - Antirrhinum majus (Garden snapdragon) & (at5g06150 : 354.0) Encodes a cyclin whose expression is reduced in response to high salt.; CYC1BAT; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN B1;3 (TAIR:AT3G11520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35872 : 275.0) no description available & (gnl|cdd|34629 : 175.0) no description available & (reliability: 708.0) & (original description: Putative Sb32, Description = Probable G2/mitotic-specific cyclin, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'nbv0.5scaffold3930_72873-80154' '(p30278|ccnb2_medsa : 423.0) G2/mitotic-specific cyclin-2 (B-like cyclin) (CycMs2) (Fragment) - Medicago sativa (Alfalfa) & (at2g17620 : 405.0) Cyclin B2;1 (CYCB2;1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin B2;2 (TAIR:AT4G35620.1); Has 4386 Blast hits to 4385 proteins in 373 species: Archae - 0; Bacteria - 0; Metazoa - 1994; Fungi - 552; Plants - 1134; Viruses - 37; Other Eukaryotes - 669 (source: NCBI BLink). & (gnl|cdd|35872 : 276.0) no description available & (gnl|cdd|34629 : 187.0) no description available & (reliability: 810.0) & (original description: Putative cyc1, Description = CycB2, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'nbv0.5scaffold4745_129655-137106' '(at4g19600 : 214.0) Encodes a cyclin T partner CYCT1;4. Plays important roles in infection with Cauliflower mosaic virus (CaMV).; CYCT1;4; FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle, response to virus, trichome morphogenesis, leaf development; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Transcription regulator cyclin (InterPro:IPR015429), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G45190.1); Has 2421 Blast hits to 2391 proteins in 275 species: Archae - 2; Bacteria - 35; Metazoa - 1157; Fungi - 528; Plants - 373; Viruses - 0; Other Eukaryotes - 326 (source: NCBI BLink). & (gnl|cdd|36052 : 179.0) no description available & (gnl|cdd|34912 : 91.2) no description available & (reliability: 428.0) & (original description: Putative TCM_020578, Description = Cyclin family protein isoform 2, PFAM = PF00134)' T '31.3' 'cell.cycle' 'nbv0.5scaffold5343_27527-40614' '(at1g70620 : 120.0) cyclin-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 240.0) & (original description: Putative , Description = Putative histone-lysine N-methyltransferase SETD1B-A-like, PFAM = PF15996)' T '31.3' 'cell.cycle' 'nbv0.5scaffold5842_6696-71177' '(at1g80370 : 422.0) Cyclin A2;4 (CYCA2;4); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin (InterPro:IPR006670), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: CYCLIN A2;3 (TAIR:AT1G15570.1); Has 4103 Blast hits to 4099 proteins in 369 species: Archae - 0; Bacteria - 2; Metazoa - 1911; Fungi - 542; Plants - 1008; Viruses - 34; Other Eukaryotes - 606 (source: NCBI BLink). & (gnl|cdd|35873 : 303.0) no description available & (p25010|ccnal_dauca : 275.0) G2/mitotic-specific cyclin C13-1 (A-like cyclin) (Fragment) - Daucus carota (Carrot) & (gnl|cdd|34629 : 171.0) no description available & (reliability: 844.0) & (original description: Putative 1, Description = Cyclin-A1-1, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'nbv0.5scaffold6354_92615-97297' '(at5g65420 : 286.0) Encodes a D-type cyclin CYCD4;1 that physically interacts with CDC2A and is expressed during vascular tissue development, embryogenesis, and formation of lateral root primordia. Its expression is upregulated early during germination.Involved in stomatal cell lineage proliferation in the hypocotyl.; CYCLIN D4;1 (CYCD4;1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle, response to sucrose stimulus, stomatal lineage progression; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: cyclin d4;2 (TAIR:AT5G10440.1). & (gnl|cdd|35875 : 242.0) no description available & (gnl|cdd|84548 : 111.0) no description available & (reliability: 572.0) & (original description: Putative cycD1, Description = Carboxy-terminal domain cyclin, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'nbv0.5scaffold7388_18753-36784' '(at5g10270 : 667.0) Encodes CDKC;1, part of a CDKC kinase complex that is targeted by Cauliflower mosaic virus (CaMV) for transcriptional activation of viral genes. Also regulates plant growth and development.; cyclin-dependent kinase C;1 (CDKC;1); FUNCTIONS IN: kinase activity; INVOLVED IN: response to virus, leaf development; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin dependent kinase group C2 (TAIR:AT5G64960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35820 : 529.0) no description available & (p28567|cdc22_pea : 279.0) Cell division control protein 2 homolog 2 (EC 2.7.11.22) (EC 2.7.11.23) (Fragment) - Pisum sativum (Garden pea) & (gnl|cdd|29142 : 258.0) no description available & (reliability: 1334.0) & (original description: Putative cdk, Description = Cyclin-dependent kinase 12, PFAM = PF00069)' T '31.3' 'cell.cycle' 'nbv0.5scaffold7713_55655-60818' '(at1g14750 : 247.0) Encodes a meiotic cyclin-like protein, distinct from all other known Arabidopsis cyclins. It is not required for meiotic DSB formation but is necessary for meiotic DSB repair via the homologous chromosome.; SOLO DANCERS (SDS); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: chiasma assembly, regulation of cell cycle, double-strand break repair via homologous recombination; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: shoot apex, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G06150.1); Has 3409 Blast hits to 3403 proteins in 338 species: Archae - 0; Bacteria - 0; Metazoa - 1595; Fungi - 422; Plants - 957; Viruses - 3; Other Eukaryotes - 432 (source: NCBI BLink). & (gnl|cdd|35872 : 94.5) no description available & (q40671|ccnb2_orysa : 84.0) G2/mitotic-specific cyclin-2 (B-like cyclin) (CycOs2) - Oryza sativa (Rice) & (reliability: 494.0) & (original description: Putative BnaA06g09550D, Description = BnaA06g09550D protein, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'niben044scf00000383ctg018_9649-12195' '(at3g05480 : 87.4) Involved in the regulation of DNA damage repair and homologous recombination.; RAD9; CONTAINS InterPro DOMAIN/s: Rad9 (InterPro:IPR007268), Cell cycle checkpoint, RAD9 (InterPro:IPR016552). & (reliability: 174.8) & (original description: Putative RAD9, Description = DNA damage repair protein RAD9, PFAM = )' T '31.3' 'cell.cycle' 'niben044scf00001312ctg008_9867-14643' '(p25011|ccnb1_soybn : 398.0) G2/mitotic-specific cyclin S13-6 (B-like cyclin) - Glycine max (Soybean) & (at2g26760 : 378.0) Cyclin B1;4 (CYCB1;4); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN B1;3 (TAIR:AT3G11520.1); Has 4222 Blast hits to 4221 proteins in 367 species: Archae - 0; Bacteria - 0; Metazoa - 1981; Fungi - 552; Plants - 1040; Viruses - 34; Other Eukaryotes - 615 (source: NCBI BLink). & (gnl|cdd|35872 : 284.0) no description available & (gnl|cdd|34629 : 186.0) no description available & (reliability: 756.0) & (original description: Putative cyc1, Description = Mitotic cyclin, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'niben044scf00002395ctg009_2753-7052' '(at5g35520 : 129.0) encodes a homologue of the yeast (S. pombe) Mis12 (minichromosome instability) protein. MIS12 co-localizes with 180 bp repeats of centromeric DNA throughout the cell cycle with a similar pattern to AtCENH3/HTR12. Neither of these two proteins completely cover the 180 bp regions based on FISH analysis.; MINICHROMOSOME INSTABILITY 12 (MIS12)-LIKE (MIS12); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitosis, cell cycle; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Centromere protein Mis12 (InterPro:IPR008685); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86964 : 95.5) no description available & (reliability: 258.0) & (original description: Putative mis12, Description = Kinetochore protein, PFAM = PF05859)' T '31.3' 'cell.cycle' 'niben044scf00002776ctg006_3381-6201' '(at5g64960 : 122.0) Encodes CDKC;2, part of a CDKC kinase complex that is targeted by Cauliflower mosaic virus (CaMV) for transcriptional activation of viral genes. Also regulates plant growth and development. Co-localizes with spliceosomal components in a manner dependent on the transcriptional status of the cells and on CDKC2-kinase activity. Expression of CDKC2 modifies the location of spliceosomal components.; cyclin dependent kinase group C2 (CDKC2); FUNCTIONS IN: kinase activity; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, nuclear body, nucleus, microtubule, spliceosomal complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase C;1 (TAIR:AT5G10270.1); Has 123595 Blast hits to 117864 proteins in 4086 species: Archae - 72; Bacteria - 13038; Metazoa - 48540; Fungi - 13012; Plants - 28885; Viruses - 501; Other Eukaryotes - 19547 (source: NCBI BLink). & (gnl|cdd|35820 : 89.4) no description available & (reliability: 244.0) & (original description: Putative cdk, Description = Cyclin-dependent kinase C-2, PFAM = )' T '31.3' 'cell.cycle' 'niben044scf00005486ctg014_1-2906' '(at2g44740 : 255.0) cyclin p4;1 (CYCP4;1); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN P4;2 (TAIR:AT5G61650.1); Has 1474 Blast hits to 1416 proteins in 218 species: Archae - 0; Bacteria - 18; Metazoa - 247; Fungi - 710; Plants - 236; Viruses - 0; Other Eukaryotes - 263 (source: NCBI BLink). & (gnl|cdd|36887 : 162.0) no description available & (gnl|cdd|72038 : 121.0) no description available & (reliability: 510.0) & (original description: Putative 1, Description = Cyclin p4, PFAM = PF08613)' T '31.3' 'cell.cycle' 'niben044scf00007803ctg001_2976-6706' '(at5g51330 : 281.0) Encodes novel protein involved in sister chromatid cohesion and meiotic chromosome organization during both male and female meiosis. Gene has two alternate transcripts which produce two similar proteins, one 57 aa shorter than the other.; SWITCH1 (SWI1); FUNCTIONS IN: phospholipase C activity; INVOLVED IN: female meiosis sister chromatid cohesion, male meiosis sister chromatid cohesion, reciprocal meiotic recombination; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23610.2); Has 525 Blast hits to 473 proteins in 93 species: Archae - 2; Bacteria - 20; Metazoa - 137; Fungi - 17; Plants - 139; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (reliability: 562.0) & (original description: Putative DYAD, Description = Protein DYAD, PFAM = )' T '31.3' 'cell.cycle' 'niben044scf00008062ctg018_350-5282' '(at5g67260 : 318.0) Encode CYCD3;2, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development.; CYCLIN D3;2 (CYCD3;2); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle, regulation of cell proliferation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;3 (TAIR:AT3G50070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35875 : 268.0) no description available & (gnl|cdd|84548 : 97.6) no description available & (reliability: 636.0) & (original description: Putative cycD1, Description = Cyclin D3, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'niben044scf00009057ctg025_869-4403' '(at5g67260 : 295.0) Encode CYCD3;2, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development.; CYCLIN D3;2 (CYCD3;2); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle, regulation of cell proliferation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;3 (TAIR:AT3G50070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35875 : 263.0) no description available & (gnl|cdd|84548 : 96.1) no description available & (reliability: 590.0) & (original description: Putative cycD1, Description = Cyclin D3, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'niben044scf00012839ctg003_2400-5837' '(gnl|cdd|37126 : 616.0) no description available & (at5g41770 : 612.0) crooked neck protein, putative / cell cycle protein, putative; FUNCTIONS IN: binding; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 5514 Blast hits to 2293 proteins in 250 species: Archae - 19; Bacteria - 57; Metazoa - 1995; Fungi - 1739; Plants - 986; Viruses - 0; Other Eukaryotes - 718 (source: NCBI BLink). & (reliability: 1224.0) & (original description: Putative clf1, Description = Crooked neck-like protein 1, PFAM = PF02184)' T '31.3' 'cell.cycle' 'niben044scf00017939ctg000_2063-6650' '(gnl|cdd|35875 : 239.0) no description available & (at5g65420 : 237.0) Encodes a D-type cyclin CYCD4;1 that physically interacts with CDC2A and is expressed during vascular tissue development, embryogenesis, and formation of lateral root primordia. Its expression is upregulated early during germination.Involved in stomatal cell lineage proliferation in the hypocotyl.; CYCLIN D4;1 (CYCD4;1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle, response to sucrose stimulus, stomatal lineage progression; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: cyclin d4;2 (TAIR:AT5G10440.1). & (gnl|cdd|84548 : 109.0) no description available & (reliability: 474.0) & (original description: Putative cycD1, Description = Cyclin-D4-1, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben044scf00025555ctg003_226-4935' '(at5g65420 : 285.0) Encodes a D-type cyclin CYCD4;1 that physically interacts with CDC2A and is expressed during vascular tissue development, embryogenesis, and formation of lateral root primordia. Its expression is upregulated early during germination.Involved in stomatal cell lineage proliferation in the hypocotyl.; CYCLIN D4;1 (CYCD4;1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle, response to sucrose stimulus, stomatal lineage progression; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: cyclin d4;2 (TAIR:AT5G10440.1). & (gnl|cdd|35875 : 239.0) no description available & (gnl|cdd|84548 : 111.0) no description available & (reliability: 570.0) & (original description: Putative cycD1, Description = Cyclin-D4-1, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben044scf00026735ctg003_666-7269' '(at1g77320 : 509.0) Mutant is defective in meiosis and produces abnormal microspores. Encodes a BRCT-domain-containing protein that could be specific to the meiotic cell cycle and that plays a crucial role in some DNA repair events independent of SPO11 DSB recombination repair.; meiosis defective 1 (MEI1); FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: female meiosis, reciprocal meiotic recombination, response to DNA damage stimulus, male meiosis; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357). & (gnl|cdd|37140 : 147.0) no description available & (reliability: 1018.0) & (original description: Putative MEI1, Description = DNA topoisomerase 2-binding protein 1-A, PFAM = PF12738;PF12738)' T '31.3' 'cell.cycle' 'niben044scf00030759ctg006_1-11180' '(at5g21080 : 924.0) Uncharacterized protein; BEST Arabidopsis thaliana protein match is: Uncharacterized protein (TAIR:AT2G41830.1); Has 304 Blast hits to 292 proteins in 85 species: Archae - 0; Bacteria - 4; Metazoa - 137; Fungi - 19; Plants - 133; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37088 : 461.0) no description available & (reliability: 1848.0) & (original description: Putative TCM_024710, Description = Uncharacterized protein isoform 1, PFAM = )' T '31.3' 'cell.cycle' 'niben044scf00030759ctg007_1-3064' '(at2g41830 : 80.1) Uncharacterized protein; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: Uncharacterized protein (TAIR:AT5G21080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative)' T '31.3' 'cell.cycle' 'niben044scf00030773ctg017_1-2754' '(at5g26850 : 108.0) Uncharacterized protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Uncharacterized protein (TAIR:AT2G41830.1). & (reliability: 216.0) & (original description: Putative , Description = Protein EFR3 B, PFAM = )' T '31.3' 'cell.cycle' 'niben044scf00035152ctg002_3256-7223' '(at1g53720 : 282.0) Encodes a cyclophilin, member of a family modular proteins consisting of a peptidyl-prolyl cisñ trans isomerase (PPIase) domain, followed by an RNA recognition motif (RRM), and a C-terminal domain enriched in charged amino acids. Interacts with with SCL33/SR33 and with a majority of Arabidopsis SR proteins and the largest subunit of RNA polymerase II. Localizes to the nucleus, but it does not significantly colocalize with SR proteins in nuclear speckles.; cyclophilin 59 (CYP59); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity, RNA binding, nucleic acid binding; INVOLVED IN: protein folding; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: peptidyl-prolyl cis-trans isomerases;hydrolases;nucleoside-triphosphatases;ATP binding;nucleotide binding;ATPases (TAIR:AT1G53780.2); Has 61647 Blast hits to 39757 proteins in 2942 species: Archae - 163; Bacteria - 9741; Metazoa - 25019; Fungi - 7217; Plants - 5688; Viruses - 226; Other Eukaryotes - 13593 (source: NCBI BLink). & (gnl|cdd|35636 : 232.0) no description available & (gnl|cdd|29392 : 82.6) no description available & (reliability: 564.0) & (original description: Putative cyp6, Description = Peptidyl-prolyl cis-trans isomerase-like 4, PFAM = PF00076)' T '31.3' 'cell.cycle' 'niben044scf00037812ctg000_10973-14771' '(at4g34160 : 264.0) encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1.; CYCLIN D3;1 (CYCD3;1); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;2 (TAIR:AT5G67260.1); Has 3155 Blast hits to 3153 proteins in 309 species: Archae - 0; Bacteria - 0; Metazoa - 1504; Fungi - 362; Plants - 1012; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (gnl|cdd|35875 : 243.0) no description available & (gnl|cdd|84548 : 101.0) no description available & (reliability: 500.0) & (original description: Putative cycD3, Description = Cyclin D3-1, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben044scf00037995ctg010_6842-14215' '(at1g03780 : 584.0) Homolog of vertebrate TPX2. Protein has three domains involved in nuclear targeting, one in nuclear export and two in microtubule binding. Involved in mitotic spindle assembly during late prophase and early prometaphase.; targeting protein for XKLP2 (TPX2); FUNCTIONS IN: microtubule binding; INVOLVED IN: spindle assembly; LOCATED IN: nucleus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cell cycle regulated microtubule associated protein (InterPro:IPR022021), Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT5G44270.1). & (reliability: 1168.0) & (original description: Putative TPX2, Description = Protein TPX2, PFAM = PF12214;PF06886)' T '31.3' 'cell.cycle' 'niben044scf00038870ctg005_1634-7274' '(at3g54630 : 369.0) CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80 (InterPro:IPR005550); Has 24780 Blast hits to 15608 proteins in 1321 species: Archae - 545; Bacteria - 2969; Metazoa - 12597; Fungi - 2181; Plants - 1581; Viruses - 39; Other Eukaryotes - 4868 (source: NCBI BLink). & (gnl|cdd|36213 : 274.0) no description available & (gnl|cdd|34784 : 123.0) no description available & (reliability: 738.0) & (original description: Putative hec1, Description = Kinetochore protein, PFAM = PF03801)' T '31.3' 'cell.cycle' 'niben044scf00039777ctg003_1-9977' '(at3g18730 : 242.0) Encodes a protein with an important role in cell division control and plant morphogenesis and may also play a role in genome maintenance. May be involved in mitosis through interaction with TSA1. In cells synchronized for cell division, TSA1 and TSK relocalize to ends of spindle microtubules that are ahead of separating chromatids during metaphase and anaphase of mitosis.; TONSOKU (TSK); FUNCTIONS IN: protein binding; INVOLVED IN: G2/M transition of mitotic cell cycle, meristem structural organization, regulation of meristem structural organization, cell division; LOCATED IN: nucleus, membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat (InterPro:IPR019734); Has 6425 Blast hits to 3886 proteins in 382 species: Archae - 66; Bacteria - 1534; Metazoa - 3543; Fungi - 23; Plants - 266; Viruses - 0; Other Eukaryotes - 993 (source: NCBI BLink). & (reliability: 484.0) & (original description: Putative NtTSK, Description = Brushy protein, putative, PFAM = PF13424)' T '31.3' 'cell.cycle' 'niben044scf00039827ctg001_10260-18818' '(at2g01120 : 547.0) Origin Recognition Complex subunit 4. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with all ORC subunits except ORC1b.; origin recognition complex subunit 4 (ORC4); CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), Origin recognition complex, subunit 4 (InterPro:IPR016527). & (gnl|cdd|37439 : 228.0) no description available & (reliability: 1094.0) & (original description: Putative PGSC0003DMG401030517, Description = Origin recognition complex subunit 4, PFAM = PF14629;PF00004)' T '31.3' 'cell.cycle' 'niben044scf00041127ctg002_1-6932' '(at1g17130 : 298.0) Family of unknown function (DUF572) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF572 (InterPro:IPR007590); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF572) (TAIR:AT2G32050.1); Has 1391 Blast hits to 1324 proteins in 252 species: Archae - 3; Bacteria - 52; Metazoa - 454; Fungi - 341; Plants - 148; Viruses - 5; Other Eukaryotes - 388 (source: NCBI BLink). & (gnl|cdd|86673 : 224.0) no description available & (gnl|cdd|38200 : 204.0) no description available & (reliability: 596.0) & (original description: Putative 19988, Description = Predicted protein, PFAM = PF04502)' T '31.3' 'cell.cycle' 'niben044scf00041127ctg002_649-5060' '(at1g17130 : 209.0) Family of unknown function (DUF572) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF572 (InterPro:IPR007590); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF572) (TAIR:AT2G32050.1); Has 1391 Blast hits to 1324 proteins in 252 species: Archae - 3; Bacteria - 52; Metazoa - 454; Fungi - 341; Plants - 148; Viruses - 5; Other Eukaryotes - 388 (source: NCBI BLink). & (gnl|cdd|86673 : 146.0) no description available & (gnl|cdd|38200 : 132.0) no description available & (reliability: 418.0) & (original description: Putative ccdc94, Description = Coiled-coil domain-containing protein 94, PFAM = PF04502)' T '31.3' 'cell.cycle' 'niben044scf00054666ctg000_15277-20854' '(at1g44110 : 489.0) Cyclin A1;1 (CYCA1;1); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin (InterPro:IPR006670), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: CYCLIN A1;2 (TAIR:AT1G77390.1); Has 4548 Blast hits to 4417 proteins in 376 species: Archae - 0; Bacteria - 4; Metazoa - 1999; Fungi - 561; Plants - 1168; Viruses - 34; Other Eukaryotes - 782 (source: NCBI BLink). & (gnl|cdd|35873 : 296.0) no description available & (p25010|ccnal_dauca : 265.0) G2/mitotic-specific cyclin C13-1 (A-like cyclin) (Fragment) - Daucus carota (Carrot) & (gnl|cdd|84548 : 168.0) no description available & (reliability: 978.0) & (original description: Putative cycA3, Description = Cyclin-A1-1, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'niben044scf00058801ctg001_5904-15131' '(at2g37560 : 410.0) Origin Recognition Complex subunit 2. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts strongly with all ORC subunits.; origin recognition complex second largest subunit 2 (ORC2); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 2 (InterPro:IPR007220); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38139 : 254.0) no description available & (gnl|cdd|86535 : 242.0) no description available & (reliability: 820.0) & (original description: Putative ORC2, Description = Origin of replication complex subunit 2, PFAM = PF04084;PF04084)' T '31.3' 'cell.cycle' 'niben101scf00107_254326-259258' '(at4g34160 : 312.0) encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1.; CYCLIN D3;1 (CYCD3;1); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;2 (TAIR:AT5G67260.1); Has 3155 Blast hits to 3153 proteins in 309 species: Archae - 0; Bacteria - 0; Metazoa - 1504; Fungi - 362; Plants - 1012; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (gnl|cdd|35875 : 268.0) no description available & (gnl|cdd|84548 : 97.6) no description available & (reliability: 616.0) & (original description: Putative cycD1, Description = Cyclin D3, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben101scf00113_625706-635121' '(at5g48630 : 354.0) Cyclin family protein; FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Transcription regulator cyclin (InterPro:IPR015429), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G48640.1). & (p93411|ccnc_orysa : 332.0) G1/S-specific cyclin C-type - Oryza sativa (Rice) & (gnl|cdd|36013 : 301.0) no description available & (gnl|cdd|34912 : 120.0) no description available & (reliability: 708.0) & (original description: Putative CycC, Description = CycC1, PFAM = PF00134)' T '31.3' 'cell.cycle' 'niben101scf00130_343002-352893' '(at5g25380 : 424.0) core cell cycle genes; cyclin a2;1 (CYCA2;1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle, DNA endoreduplication; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: mitotic-like cyclin 3B from Arabidopsis (TAIR:AT5G11300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35873 : 309.0) no description available & (p25010|ccnal_dauca : 280.0) G2/mitotic-specific cyclin C13-1 (A-like cyclin) (Fragment) - Daucus carota (Carrot) & (gnl|cdd|34629 : 170.0) no description available & (reliability: 846.0) & (original description: Putative cycA3, Description = Cyclin-A2-1, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben101scf00163_1523749-1529190' '(at2g44740 : 247.0) cyclin p4;1 (CYCP4;1); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN P4;2 (TAIR:AT5G61650.1); Has 1474 Blast hits to 1416 proteins in 218 species: Archae - 0; Bacteria - 18; Metazoa - 247; Fungi - 710; Plants - 236; Viruses - 0; Other Eukaryotes - 263 (source: NCBI BLink). & (gnl|cdd|36887 : 151.0) no description available & (gnl|cdd|72038 : 126.0) no description available & (reliability: 494.0) & (original description: Putative 1, Description = CycP4, PFAM = PF08613)' T '31.3' 'cell.cycle' 'niben101scf00238_900984-906755' '(at4g03270 : 188.0) Cyclin D6;1 (CYCD6;1); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: F mature embryo stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D4;1 (TAIR:AT5G65420.1); Has 2035 Blast hits to 2034 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 1002; Fungi - 29; Plants - 874; Viruses - 2; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|35875 : 153.0) no description available & (reliability: 376.0) & (original description: Putative 1, Description = D6-type cyclin, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben101scf00293_295761-322299' '(at1g77320 : 907.0) Mutant is defective in meiosis and produces abnormal microspores. Encodes a BRCT-domain-containing protein that could be specific to the meiotic cell cycle and that plays a crucial role in some DNA repair events independent of SPO11 DSB recombination repair.; meiosis defective 1 (MEI1); FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: female meiosis, reciprocal meiotic recombination, response to DNA damage stimulus, male meiosis; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357). & (gnl|cdd|37140 : 163.0) no description available & (reliability: 1814.0) & (original description: Putative MEI1, Description = Meiosis defective 1, PFAM = PF00533;PF16589;PF12738;PF12738;PF12738)' T '31.3' 'cell.cycle' 'niben101scf00397_655041-658270' '(at3g60550 : 316.0) cyclin p3;2 (CYCP3;2); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin-related 2 (InterPro:IPR013922); BEST Arabidopsis thaliana protein match is: cyclin p3;1 (TAIR:AT2G45080.1); Has 1360 Blast hits to 1354 proteins in 218 species: Archae - 0; Bacteria - 18; Metazoa - 236; Fungi - 630; Plants - 217; Viruses - 0; Other Eukaryotes - 259 (source: NCBI BLink). & (gnl|cdd|36887 : 160.0) no description available & (gnl|cdd|72038 : 108.0) no description available & (reliability: 620.0) & (original description: Putative Sb34, Description = Cyclin p4, PFAM = PF08613)' T '31.3' 'cell.cycle' 'niben101scf00430_190591-214125' '(at2g37560 : 411.0) Origin Recognition Complex subunit 2. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts strongly with all ORC subunits.; origin recognition complex second largest subunit 2 (ORC2); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 2 (InterPro:IPR007220); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38139 : 261.0) no description available & (gnl|cdd|86535 : 244.0) no description available & (reliability: 822.0) & (original description: Putative orc2, Description = Origin recognition complex subunit 2, PFAM = PF04084;PF04084)' T '31.3' 'cell.cycle' 'niben101scf00585_432288-444466' '(p30278|ccnb2_medsa : 425.0) G2/mitotic-specific cyclin-2 (B-like cyclin) (CycMs2) (Fragment) - Medicago sativa (Alfalfa) & (at1g20610 : 415.0) Cyclin B2;3 (CYCB2;3); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN B2;4 (TAIR:AT1G76310.1); Has 4405 Blast hits to 4396 proteins in 374 species: Archae - 0; Bacteria - 7; Metazoa - 2039; Fungi - 549; Plants - 1150; Viruses - 30; Other Eukaryotes - 630 (source: NCBI BLink). & (gnl|cdd|35872 : 272.0) no description available & (gnl|cdd|34629 : 186.0) no description available & (reliability: 830.0) & (original description: Putative cyc1, Description = CycB2, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'niben101scf00646_366704-372347' '(at3g54630 : 354.0) CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80 (InterPro:IPR005550); Has 24780 Blast hits to 15608 proteins in 1321 species: Archae - 545; Bacteria - 2969; Metazoa - 12597; Fungi - 2181; Plants - 1581; Viruses - 39; Other Eukaryotes - 4868 (source: NCBI BLink). & (gnl|cdd|36213 : 268.0) no description available & (gnl|cdd|34784 : 121.0) no description available & (reliability: 708.0) & (original description: Putative hec1, Description = Kinetochore protein, PFAM = PF03801)' T '31.3' 'cell.cycle' 'niben101scf00712_1643634-1648156' '(at1g76310 : 504.0) core cell cycle genes; CYCLIN B2;4 (CYCB2;4); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin B2;3 (TAIR:AT1G20610.1); Has 4261 Blast hits to 4252 proteins in 371 species: Archae - 0; Bacteria - 0; Metazoa - 1989; Fungi - 541; Plants - 1112; Viruses - 30; Other Eukaryotes - 589 (source: NCBI BLink). & (q40671|ccnb2_orysa : 432.0) G2/mitotic-specific cyclin-2 (B-like cyclin) (CycOs2) - Oryza sativa (Rice) & (gnl|cdd|35872 : 296.0) no description available & (gnl|cdd|34629 : 191.0) no description available & (reliability: 1008.0) & (original description: Putative cycb, Description = CycB2, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'niben101scf00745_262775-267392' '(q38772|cdc2a_antma : 437.0) Cell division control protein 2 homolog A (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (at3g48750 : 418.0) A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase.; cell division control 2 (CDC2); FUNCTIONS IN: protein binding, protein kinase activity, cyclin-dependent protein kinase activity, kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B1;2 (TAIR:AT2G38620.2); Has 126125 Blast hits to 124135 proteins in 4221 species: Archae - 112; Bacteria - 14002; Metazoa - 46757; Fungi - 13170; Plants - 30525; Viruses - 484; Other Eukaryotes - 21075 (source: NCBI BLink). & (gnl|cdd|35814 : 343.0) no description available & (gnl|cdd|29142 : 248.0) no description available & (reliability: 836.0) & (original description: Putative CDK1, Description = Cyclin-dependent kinase 1, PFAM = PF00069)' T '31.3' 'cell.cycle' 'niben101scf00799_531258-536144' '(at1g44110 : 459.0) Cyclin A1;1 (CYCA1;1); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin (InterPro:IPR006670), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: CYCLIN A1;2 (TAIR:AT1G77390.1); Has 4548 Blast hits to 4417 proteins in 376 species: Archae - 0; Bacteria - 4; Metazoa - 1999; Fungi - 561; Plants - 1168; Viruses - 34; Other Eukaryotes - 782 (source: NCBI BLink). & (gnl|cdd|35873 : 295.0) no description available & (p25010|ccnal_dauca : 265.0) G2/mitotic-specific cyclin C13-1 (A-like cyclin) (Fragment) - Daucus carota (Carrot) & (gnl|cdd|84548 : 167.0) no description available & (reliability: 918.0) & (original description: Putative cycA3, Description = Cyclin-A1-1, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben101scf00862_187760-194240' '(p25011|ccnb1_soybn : 422.0) G2/mitotic-specific cyclin S13-6 (B-like cyclin) - Glycine max (Soybean) & (at5g06150 : 400.0) Encodes a cyclin whose expression is reduced in response to high salt.; CYC1BAT; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN B1;3 (TAIR:AT3G11520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35872 : 280.0) no description available & (gnl|cdd|34629 : 188.0) no description available & (reliability: 800.0) & (original description: Putative cycb, Description = Cyclin B, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben101scf00925_291824-295907' '(at1g17130 : 82.0) Family of unknown function (DUF572) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF572 (InterPro:IPR007590); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF572) (TAIR:AT2G32050.1); Has 1391 Blast hits to 1324 proteins in 252 species: Archae - 3; Bacteria - 52; Metazoa - 454; Fungi - 341; Plants - 148; Viruses - 5; Other Eukaryotes - 388 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative Sb03g026390, Description = Coiled-coil domain-containing protein 94, PFAM = PF04502)' T '31.3' 'cell.cycle' 'niben101scf01141_1190733-1195464' '(at5g65420 : 265.0) Encodes a D-type cyclin CYCD4;1 that physically interacts with CDC2A and is expressed during vascular tissue development, embryogenesis, and formation of lateral root primordia. Its expression is upregulated early during germination.Involved in stomatal cell lineage proliferation in the hypocotyl.; CYCLIN D4;1 (CYCD4;1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle, response to sucrose stimulus, stomatal lineage progression; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: cyclin d4;2 (TAIR:AT5G10440.1). & (gnl|cdd|35875 : 228.0) no description available & (gnl|cdd|84548 : 105.0) no description available & (reliability: 530.0) & (original description: Putative cycD1, Description = Cyclin-D4-1, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'niben101scf01150_328554-343445' '(at4g30820 : 146.0) cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cdk-activating kinase assembly factor (MAT1) (InterPro:IPR004575), Cdk-activating kinase assembly factor, MAT1 (InterPro:IPR015877); Has 365 Blast hits to 365 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 129; Fungi - 145; Plants - 58; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|87072 : 98.9) no description available & (gnl|cdd|39004 : 82.7) no description available & (reliability: 292.0) & (original description: Putative Os06g0171700, Description = Os06g0171700 protein, PFAM = PF06391)' T '31.3' 'cell.cycle' 'niben101scf01191_110364-114001' '(at3g05327 : 172.0) Cyclin family protein; CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin-related 2 (InterPro:IPR013922); BEST Arabidopsis thaliana protein match is: cyclin p4;1 (TAIR:AT2G44740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36887 : 136.0) no description available & (gnl|cdd|72038 : 108.0) no description available & (reliability: 344.0) & (original description: Putative 1, Description = Cyclin p4, PFAM = PF08613)' T '31.3' 'cell.cycle' 'niben101scf01204_89300-95631' '(at5g51330 : 213.0) Encodes novel protein involved in sister chromatid cohesion and meiotic chromosome organization during both male and female meiosis. Gene has two alternate transcripts which produce two similar proteins, one 57 aa shorter than the other.; SWITCH1 (SWI1); FUNCTIONS IN: phospholipase C activity; INVOLVED IN: female meiosis sister chromatid cohesion, male meiosis sister chromatid cohesion, reciprocal meiotic recombination; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23610.2); Has 525 Blast hits to 473 proteins in 93 species: Archae - 2; Bacteria - 20; Metazoa - 137; Fungi - 17; Plants - 139; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative BnaA09g05210D, Description = DYAD-like protein, PFAM = )' T '31.3' 'cell.cycle' 'niben101scf01338_260211-265470' '(at1g25682 : 383.0) Family of unknown function (DUF572) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF572 (InterPro:IPR007590); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF572) (TAIR:AT1G25988.1); Has 717 Blast hits to 715 proteins in 213 species: Archae - 0; Bacteria - 6; Metazoa - 235; Fungi - 232; Plants - 115; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|38201 : 324.0) no description available & (gnl|cdd|86673 : 139.0) no description available & (reliability: 766.0) & (original description: Putative Sb06g029700, Description = Putative uncharacterized protein Sb06g029700, PFAM = PF04502)' T '31.3' 'cell.cycle' 'niben101scf01464_144311-147530' '(at2g27970 : 136.0) CDK-subunit 2 (CKS2); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity, cyclin-dependent protein kinase activity; INVOLVED IN: cell cycle; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin-dependent kinase, regulatory subunit (InterPro:IPR000789); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase-subunit 1 (TAIR:AT2G27960.1); Has 657 Blast hits to 657 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 305; Fungi - 139; Plants - 105; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (gnl|cdd|38694 : 132.0) no description available & (gnl|cdd|64946 : 124.0) no description available & (reliability: 272.0) & (original description: Putative CKS2, Description = Cyclin-dependent kinases regulatory subunit 2, PFAM = PF01111)' T '31.3' 'cell.cycle' 'niben101scf01494_311389-316550' '(at1g70210 : 348.0) Encodes a D-type cyclin that physically interacts with CDC2A. Its expression is upregulated early during germination.; CYCLIN D1;1 (CYCD1;1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin D2;1 (TAIR:AT2G22490.1); Has 3455 Blast hits to 3453 proteins in 343 species: Archae - 0; Bacteria - 0; Metazoa - 1586; Fungi - 382; Plants - 1073; Viruses - 13; Other Eukaryotes - 401 (source: NCBI BLink). & (gnl|cdd|35875 : 269.0) no description available & (gnl|cdd|84548 : 108.0) no description available & (reliability: 696.0) & (original description: Putative cycD, Description = Cyclin-D1-1, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'niben101scf01497_13405-18498' '(at1g76310 : 408.0) core cell cycle genes; CYCLIN B2;4 (CYCB2;4); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin B2;3 (TAIR:AT1G20610.1); Has 4261 Blast hits to 4252 proteins in 371 species: Archae - 0; Bacteria - 0; Metazoa - 1989; Fungi - 541; Plants - 1112; Viruses - 30; Other Eukaryotes - 589 (source: NCBI BLink). & (p30278|ccnb2_medsa : 402.0) G2/mitotic-specific cyclin-2 (B-like cyclin) (CycMs2) (Fragment) - Medicago sativa (Alfalfa) & (gnl|cdd|35872 : 280.0) no description available & (gnl|cdd|34629 : 194.0) no description available & (reliability: 816.0) & (original description: Putative CYCB2, Description = B2-type cyclin, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben101scf01661_320370-333113' '(at5g35520 : 148.0) encodes a homologue of the yeast (S. pombe) Mis12 (minichromosome instability) protein. MIS12 co-localizes with 180 bp repeats of centromeric DNA throughout the cell cycle with a similar pattern to AtCENH3/HTR12. Neither of these two proteins completely cover the 180 bp regions based on FISH analysis.; MINICHROMOSOME INSTABILITY 12 (MIS12)-LIKE (MIS12); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitosis, cell cycle; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Centromere protein Mis12 (InterPro:IPR008685); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86964 : 90.9) no description available & (reliability: 296.0) & (original description: Putative MIS12, Description = Protein MIS12 homolog, PFAM = PF05859)' T '31.3' 'cell.cycle' 'niben101scf01888_676268-681606' '(at1g44110 : 479.0) Cyclin A1;1 (CYCA1;1); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin (InterPro:IPR006670), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: CYCLIN A1;2 (TAIR:AT1G77390.1); Has 4548 Blast hits to 4417 proteins in 376 species: Archae - 0; Bacteria - 4; Metazoa - 1999; Fungi - 561; Plants - 1168; Viruses - 34; Other Eukaryotes - 782 (source: NCBI BLink). & (gnl|cdd|35873 : 291.0) no description available & (p25010|ccnal_dauca : 264.0) G2/mitotic-specific cyclin C13-1 (A-like cyclin) (Fragment) - Daucus carota (Carrot) & (gnl|cdd|84548 : 166.0) no description available & (reliability: 958.0) & (original description: Putative cycA3, Description = Cyclin-A1-1, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'niben101scf01999_398983-404094' '(p34800|ccn1_antma : 491.0) G2/mitotic-specific cyclin-1 - Antirrhinum majus (Garden snapdragon) & (at2g26760 : 387.0) Cyclin B1;4 (CYCB1;4); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN B1;3 (TAIR:AT3G11520.1); Has 4222 Blast hits to 4221 proteins in 367 species: Archae - 0; Bacteria - 0; Metazoa - 1981; Fungi - 552; Plants - 1040; Viruses - 34; Other Eukaryotes - 615 (source: NCBI BLink). & (gnl|cdd|35872 : 271.0) no description available & (gnl|cdd|34629 : 189.0) no description available & (reliability: 774.0) & (original description: Putative cyc1, Description = CycB1, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben101scf02041_216041-221097' '(at1g76310 : 423.0) core cell cycle genes; CYCLIN B2;4 (CYCB2;4); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin B2;3 (TAIR:AT1G20610.1); Has 4261 Blast hits to 4252 proteins in 371 species: Archae - 0; Bacteria - 0; Metazoa - 1989; Fungi - 541; Plants - 1112; Viruses - 30; Other Eukaryotes - 589 (source: NCBI BLink). & (p30278|ccnb2_medsa : 408.0) G2/mitotic-specific cyclin-2 (B-like cyclin) (CycMs2) (Fragment) - Medicago sativa (Alfalfa) & (gnl|cdd|35872 : 275.0) no description available & (gnl|cdd|34629 : 191.0) no description available & (reliability: 846.0) & (original description: Putative cycB1, Description = CycB2, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben101scf02044_1277507-1296026' '(at1g53720 : 570.0) Encodes a cyclophilin, member of a family modular proteins consisting of a peptidyl-prolyl cisñ trans isomerase (PPIase) domain, followed by an RNA recognition motif (RRM), and a C-terminal domain enriched in charged amino acids. Interacts with with SCL33/SR33 and with a majority of Arabidopsis SR proteins and the largest subunit of RNA polymerase II. Localizes to the nucleus, but it does not significantly colocalize with SR proteins in nuclear speckles.; cyclophilin 59 (CYP59); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity, RNA binding, nucleic acid binding; INVOLVED IN: protein folding; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: peptidyl-prolyl cis-trans isomerases;hydrolases;nucleoside-triphosphatases;ATP binding;nucleotide binding;ATPases (TAIR:AT1G53780.2); Has 61647 Blast hits to 39757 proteins in 2942 species: Archae - 163; Bacteria - 9741; Metazoa - 25019; Fungi - 7217; Plants - 5688; Viruses - 226; Other Eukaryotes - 13593 (source: NCBI BLink). & (gnl|cdd|35636 : 482.0) no description available & (gnl|cdd|29392 : 274.0) no description available & (reliability: 1140.0) & (original description: Putative CYP59, Description = Peptidyl-prolyl cis-trans isomerase CYP59, PFAM = PF00160;PF00076;PF00098)' T '31.3' 'cell.cycle' 'niben101scf02135_37636-73972' '(at3g18730 : 944.0) Encodes a protein with an important role in cell division control and plant morphogenesis and may also play a role in genome maintenance. May be involved in mitosis through interaction with TSA1. In cells synchronized for cell division, TSA1 and TSK relocalize to ends of spindle microtubules that are ahead of separating chromatids during metaphase and anaphase of mitosis.; TONSOKU (TSK); FUNCTIONS IN: protein binding; INVOLVED IN: G2/M transition of mitotic cell cycle, meristem structural organization, regulation of meristem structural organization, cell division; LOCATED IN: nucleus, membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat (InterPro:IPR019734); Has 6425 Blast hits to 3886 proteins in 382 species: Archae - 66; Bacteria - 1534; Metazoa - 3543; Fungi - 23; Plants - 266; Viruses - 0; Other Eukaryotes - 993 (source: NCBI BLink). & (reliability: 1888.0) & (original description: Putative TSK, Description = Protein TONSOKU, PFAM = PF13181;PF13424;PF13424)' T '31.3' 'cell.cycle' 'niben101scf02151_489187-506511' '(at1g17130 : 316.0) Family of unknown function (DUF572) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF572 (InterPro:IPR007590); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF572) (TAIR:AT2G32050.1); Has 1391 Blast hits to 1324 proteins in 252 species: Archae - 3; Bacteria - 52; Metazoa - 454; Fungi - 341; Plants - 148; Viruses - 5; Other Eukaryotes - 388 (source: NCBI BLink). & (gnl|cdd|86673 : 255.0) no description available & (gnl|cdd|38200 : 214.0) no description available & (reliability: 632.0) & (original description: Putative ccdc94, Description = Coiled-coil domain containing 94, PFAM = PF04502)' T '31.3' 'cell.cycle' 'niben101scf02217_570632-580784' '(q38772|cdc2a_antma : 582.0) Cell division control protein 2 homolog A (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (at3g48750 : 532.0) A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase.; cell division control 2 (CDC2); FUNCTIONS IN: protein binding, protein kinase activity, cyclin-dependent protein kinase activity, kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B1;2 (TAIR:AT2G38620.2); Has 126125 Blast hits to 124135 proteins in 4221 species: Archae - 112; Bacteria - 14002; Metazoa - 46757; Fungi - 13170; Plants - 30525; Viruses - 484; Other Eukaryotes - 21075 (source: NCBI BLink). & (gnl|cdd|35814 : 438.0) no description available & (gnl|cdd|29142 : 280.0) no description available & (reliability: 1064.0) & (original description: Putative cdc2, Description = Cdc2 protein, PFAM = PF00069)' T '31.3' 'cell.cycle' 'niben101scf02268_638629-658843' '(at5g10270 : 683.0) Encodes CDKC;1, part of a CDKC kinase complex that is targeted by Cauliflower mosaic virus (CaMV) for transcriptional activation of viral genes. Also regulates plant growth and development.; cyclin-dependent kinase C;1 (CDKC;1); FUNCTIONS IN: kinase activity; INVOLVED IN: response to virus, leaf development; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin dependent kinase group C2 (TAIR:AT5G64960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35820 : 557.0) no description available & (q38772|cdc2a_antma : 280.0) Cell division control protein 2 homolog A (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (gnl|cdd|29142 : 274.0) no description available & (reliability: 1366.0) & (original description: Putative cdk, Description = Cyclin-dependent kinase 12, PFAM = PF00069)' T '31.3' 'cell.cycle' 'niben101scf02271_142322-147962' '(at4g03270 : 180.0) Cyclin D6;1 (CYCD6;1); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: F mature embryo stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D4;1 (TAIR:AT5G65420.1); Has 2035 Blast hits to 2034 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 1002; Fungi - 29; Plants - 874; Viruses - 2; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|35875 : 157.0) no description available & (reliability: 360.0) & (original description: Putative 1, Description = D6-type cyclin, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben101scf02298_364276-369468' '(at4g03270 : 182.0) Cyclin D6;1 (CYCD6;1); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: F mature embryo stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D4;1 (TAIR:AT5G65420.1); Has 2035 Blast hits to 2034 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 1002; Fungi - 29; Plants - 874; Viruses - 2; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|35875 : 150.0) no description available & (reliability: 364.0) & (original description: Putative CYCD6, Description = D6-type cyclin, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben101scf02361_344525-354443' '(at4g22910 : 643.0) FIZZY-related 2 (FZR2); FUNCTIONS IN: signal transducer activity; INVOLVED IN: trichome branching, signal transduction, DNA endoreduplication, cell growth; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: cell cycle switch protein 52 A2 (TAIR:AT4G11920.1); Has 43458 Blast hits to 22953 proteins in 693 species: Archae - 46; Bacteria - 6865; Metazoa - 16440; Fungi - 9775; Plants - 5102; Viruses - 0; Other Eukaryotes - 5230 (source: NCBI BLink). & (gnl|cdd|35526 : 472.0) no description available & (gnl|cdd|29257 : 138.0) no description available & (reliability: 1286.0) & (original description: Putative FZR2, Description = Protein FIZZY-RELATED 2, PFAM = PF12894;PF00400;PF00400;PF00400)' T '31.3' 'cell.cycle' 'niben101scf02414_314186-318282' '(at2g42260 : 168.0) Encodes a novel plant-specific protein of unknown function. The UVI4 gene is expressed mainly in actively dividing cells. The hypocotyl cells in mutant seedlings undergo one extra round of endoreduplication. The uvi4 mutation also promoted the progression of endo-reduplication during leaf development.; UV-B-INSENSITIVE 4 (UVI4); BEST Arabidopsis thaliana protein match is: UV-B-insensitive 4-like (TAIR:AT3G57860.1); Has 62 Blast hits to 62 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative PYM, Description = Protein POLYCHOME, PFAM = )' T '31.3' 'cell.cycle' 'niben101scf02438_250926-261695' '(gnl|cdd|38300 : 473.0) no description available & (at4g28510 : 420.0) prohibitin 1 (Atphb1); prohibitin 1 (PHB1); INVOLVED IN: response to stress; LOCATED IN: mitochondrion, plasma membrane, respiratory chain complex I; EXPRESSED IN: 10 plant structures; CONTAINS InterPro DOMAIN/s: Prohibitin (InterPro:IPR000163), Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: prohibitin 6 (TAIR:AT2G20530.2); Has 4079 Blast hits to 4077 proteins in 1204 species: Archae - 185; Bacteria - 2047; Metazoa - 512; Fungi - 318; Plants - 262; Viruses - 12; Other Eukaryotes - 743 (source: NCBI BLink). & (gnl|cdd|48213 : 308.0) no description available & (reliability: 814.0) & (original description: Putative PHB2, Description = Prohibitin-2, mitochondrial, PFAM = PF01145)' T '31.3' 'cell.cycle' 'niben101scf02445_1062283-1065769' '(at4g34160 : 254.0) encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1.; CYCLIN D3;1 (CYCD3;1); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;2 (TAIR:AT5G67260.1); Has 3155 Blast hits to 3153 proteins in 309 species: Archae - 0; Bacteria - 0; Metazoa - 1504; Fungi - 362; Plants - 1012; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (gnl|cdd|35875 : 242.0) no description available & (gnl|cdd|84548 : 101.0) no description available & (reliability: 476.0) & (original description: Putative cycD3, Description = Cyclin D3-1, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben101scf02461_348381-366036' '(at1g16330 : 373.0) core cell cycle genes; cyclin b3;1 (CYCB3;1); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin B2;3 (TAIR:AT1G20610.1); Has 4427 Blast hits to 4424 proteins in 376 species: Archae - 0; Bacteria - 0; Metazoa - 2128; Fungi - 557; Plants - 1053; Viruses - 34; Other Eukaryotes - 655 (source: NCBI BLink). & (q40671|ccnb2_orysa : 231.0) G2/mitotic-specific cyclin-2 (B-like cyclin) (CycOs2) - Oryza sativa (Rice) & (gnl|cdd|35872 : 193.0) no description available & (gnl|cdd|84548 : 152.0) no description available & (reliability: 746.0) & (original description: Putative cycb, Description = Cyclin B2, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'niben101scf02461_349484-352301' '(at1g16330 : 177.0) core cell cycle genes; cyclin b3;1 (CYCB3;1); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin B2;3 (TAIR:AT1G20610.1); Has 4427 Blast hits to 4424 proteins in 376 species: Archae - 0; Bacteria - 0; Metazoa - 2128; Fungi - 557; Plants - 1053; Viruses - 34; Other Eukaryotes - 655 (source: NCBI BLink). & (p25011|ccnb1_soybn : 125.0) G2/mitotic-specific cyclin S13-6 (B-like cyclin) - Glycine max (Soybean) & (gnl|cdd|84548 : 113.0) no description available & (gnl|cdd|35872 : 108.0) no description available & (reliability: 354.0) & (original description: Putative cycB2, Description = Cyclin B2, PFAM = PF00134)' T '31.3' 'cell.cycle' 'niben101scf02572_349167-355661' '(at1g80370 : 385.0) Cyclin A2;4 (CYCA2;4); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin (InterPro:IPR006670), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: CYCLIN A2;3 (TAIR:AT1G15570.1); Has 4103 Blast hits to 4099 proteins in 369 species: Archae - 0; Bacteria - 2; Metazoa - 1911; Fungi - 542; Plants - 1008; Viruses - 34; Other Eukaryotes - 606 (source: NCBI BLink). & (gnl|cdd|35873 : 286.0) no description available & (p25010|ccnal_dauca : 257.0) G2/mitotic-specific cyclin C13-1 (A-like cyclin) (Fragment) - Daucus carota (Carrot) & (gnl|cdd|34629 : 145.0) no description available & (reliability: 770.0) & (original description: Putative cycA3, Description = Cyclin A/B/D/E, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben101scf02573_299357-304143' '(at5g65420 : 267.0) Encodes a D-type cyclin CYCD4;1 that physically interacts with CDC2A and is expressed during vascular tissue development, embryogenesis, and formation of lateral root primordia. Its expression is upregulated early during germination.Involved in stomatal cell lineage proliferation in the hypocotyl.; CYCLIN D4;1 (CYCD4;1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle, response to sucrose stimulus, stomatal lineage progression; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: cyclin d4;2 (TAIR:AT5G10440.1). & (gnl|cdd|35875 : 226.0) no description available & (gnl|cdd|84548 : 108.0) no description available & (reliability: 534.0) & (original description: Putative cycD1, Description = Cyclin-D4-1, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben101scf02588_86882-90883' '(gnl|cdd|35875 : 256.0) no description available & (at2g22490 : 251.0) encodes a D-type cyclin whose transcription level is regulated by sucrose but not phytohormones or nitrate. Protein physically interacts with CDC2A. CycD2 kinase activity is regulated by sequestration of CycD2 protein in a form inaccessible to immunoprecipitation and probably not complexed to CDC2A.; Cyclin D2;1 (CYCD2;1); FUNCTIONS IN: protein binding, cyclin-dependent protein kinase regulator activity; INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle, response to sucrose stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D4;1 (TAIR:AT5G65420.1). & (gnl|cdd|84548 : 118.0) no description available & (reliability: 502.0) & (original description: Putative cycD1, Description = Cyclin-D4-1, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben101scf02755_450842-455368' '(at2g22490 : 247.0) encodes a D-type cyclin whose transcription level is regulated by sucrose but not phytohormones or nitrate. Protein physically interacts with CDC2A. CycD2 kinase activity is regulated by sequestration of CycD2 protein in a form inaccessible to immunoprecipitation and probably not complexed to CDC2A.; Cyclin D2;1 (CYCD2;1); FUNCTIONS IN: protein binding, cyclin-dependent protein kinase regulator activity; INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle, response to sucrose stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D4;1 (TAIR:AT5G65420.1). & (gnl|cdd|35875 : 235.0) no description available & (gnl|cdd|84548 : 109.0) no description available & (reliability: 494.0) & (original description: Putative cycD1, Description = Cyclin-D4-1, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben101scf02832_129053-132603' '(at5g67260 : 295.0) Encode CYCD3;2, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development.; CYCLIN D3;2 (CYCD3;2); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle, regulation of cell proliferation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;3 (TAIR:AT3G50070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35875 : 264.0) no description available & (gnl|cdd|84548 : 99.2) no description available & (reliability: 590.0) & (original description: Putative cycD1, Description = Cyclin D3, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben101scf02908_507142-535637' '(at5g40820 : 3196.0) Encodes a Arabidopsis ortholog of the ATR protein kinase that is involved in a wide range of responses to DNA damage and plays a central role in cell-cycle regulation. Dominant loss of function alleles identified as suppressors of ALS also exhibit increased tolerance to aluminum. This may be due to the inhibition of terminal differentiation of the root apex upon exposure to Al.; Ataxia telangiectasia-mutated and RAD3-related (ATR); FUNCTIONS IN: protein serine/threonine kinase activity, inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: in 9 processes; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), UME (InterPro:IPR012993), Protein kinase-like domain (InterPro:IPR011009), PIK-related kinase, FAT (InterPro:IPR003151), Armadillo-type fold (InterPro:IPR016024), PIK-related kinase (InterPro:IPR014009), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), PIK-related kinase, FATC (InterPro:IPR003152); BEST Arabidopsis thaliana protein match is: ataxia-telangiectasia mutated (TAIR:AT3G48190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5z987|atr_orysa : 2982.0) Serine/threonine-protein kinase ATR (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|36108 : 1471.0) no description available & (gnl|cdd|73241 : 353.0) no description available & (reliability: 6392.0) & (original description: Putative ATR, Description = Serine/threonine-protein kinase ATR, PFAM = PF02260;PF00454;PF08064;PF02259)' T '31.3' 'cell.cycle' 'niben101scf02930_215-12802' '(at2g44740 : 116.0) cyclin p4;1 (CYCP4;1); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN P4;2 (TAIR:AT5G61650.1); Has 1474 Blast hits to 1416 proteins in 218 species: Archae - 0; Bacteria - 18; Metazoa - 247; Fungi - 710; Plants - 236; Viruses - 0; Other Eukaryotes - 263 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative PGSC0003DMG400003451, Description = Cyclin-dependent protein kinase, putative, PFAM = PF08613)' T '31.3' 'cell.cycle' 'niben101scf02937_968788-982360' '(at1g70620 : 118.0) cyclin-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 236.0) & (original description: Putative , Description = Putative histone-lysine N-methyltransferase SETD1B-A-like, PFAM = PF15996)' T '31.3' 'cell.cycle' 'niben101scf03141_397772-402834' '(at1g76310 : 479.0) core cell cycle genes; CYCLIN B2;4 (CYCB2;4); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin B2;3 (TAIR:AT1G20610.1); Has 4261 Blast hits to 4252 proteins in 371 species: Archae - 0; Bacteria - 0; Metazoa - 1989; Fungi - 541; Plants - 1112; Viruses - 30; Other Eukaryotes - 589 (source: NCBI BLink). & (p30278|ccnb2_medsa : 403.0) G2/mitotic-specific cyclin-2 (B-like cyclin) (CycMs2) (Fragment) - Medicago sativa (Alfalfa) & (gnl|cdd|35872 : 262.0) no description available & (gnl|cdd|84548 : 173.0) no description available & (reliability: 958.0) & (original description: Putative cyc1, Description = CycB2, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'niben101scf03208_772184-777364' '(at5g48820 : 139.0) Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. Binds to D type and CDC2A cyclins and may inhibit cell cycle. Seven KRP genes were found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization.; inhibitor/interactor with cyclin-dependent kinase (ICK6); CONTAINS InterPro DOMAIN/s: Cyclin-dependent kinase inhibitor (InterPro:IPR003175), Cyclin-dependent kinase inhibitor, plant (InterPro:IPR016701); BEST Arabidopsis thaliana protein match is: Cyclin-dependent kinase inhibitor family protein (TAIR:AT3G24810.1). & (reliability: 278.0) & (original description: Putative krp1, Description = P27KIP1-related-protein 1, PFAM = PF02234)' T '31.3' 'cell.cycle' 'niben101scf03264_408035-422696' '(at5g21080 : 993.0) Uncharacterized protein; BEST Arabidopsis thaliana protein match is: Uncharacterized protein (TAIR:AT2G41830.1); Has 304 Blast hits to 292 proteins in 85 species: Archae - 0; Bacteria - 4; Metazoa - 137; Fungi - 19; Plants - 133; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37088 : 486.0) no description available & (reliability: 1986.0) & (original description: Putative TCM_024710, Description = Uncharacterized protein isoform 1, PFAM = )' T '31.3' 'cell.cycle' 'niben101scf03370_595049-599448' '(p34800|ccn1_antma : 481.0) G2/mitotic-specific cyclin-1 - Antirrhinum majus (Garden snapdragon) & (at5g06150 : 392.0) Encodes a cyclin whose expression is reduced in response to high salt.; CYC1BAT; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN B1;3 (TAIR:AT3G11520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35872 : 277.0) no description available & (gnl|cdd|34629 : 182.0) no description available & (reliability: 784.0) & (original description: Putative cyc1, Description = CycB1, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'niben101scf03421_145035-148149' '(gnl|cdd|35875 : 179.0) no description available & (at2g22490 : 176.0) encodes a D-type cyclin whose transcription level is regulated by sucrose but not phytohormones or nitrate. Protein physically interacts with CDC2A. CycD2 kinase activity is regulated by sequestration of CycD2 protein in a form inaccessible to immunoprecipitation and probably not complexed to CDC2A.; Cyclin D2;1 (CYCD2;1); FUNCTIONS IN: protein binding, cyclin-dependent protein kinase regulator activity; INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle, response to sucrose stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D4;1 (TAIR:AT5G65420.1). & (gnl|cdd|84548 : 91.9) no description available & (reliability: 352.0) & (original description: Putative cycD, Description = Cyclin-D4-1, PFAM = PF00134)' T '31.3' 'cell.cycle' 'niben101scf03488_946093-951067' '(at5g48820 : 131.0) Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. Binds to D type and CDC2A cyclins and may inhibit cell cycle. Seven KRP genes were found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization.; inhibitor/interactor with cyclin-dependent kinase (ICK6); CONTAINS InterPro DOMAIN/s: Cyclin-dependent kinase inhibitor (InterPro:IPR003175), Cyclin-dependent kinase inhibitor, plant (InterPro:IPR016701); BEST Arabidopsis thaliana protein match is: Cyclin-dependent kinase inhibitor family protein (TAIR:AT3G24810.1). & (reliability: 262.0) & (original description: Putative krp4, Description = Cyclin dependent kinase inhibitor, PFAM = PF02234)' T '31.3' 'cell.cycle' 'niben101scf03687_7137-19448' '(at3g10530 : 691.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), BING4, C-terminal (InterPro:IPR012952), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated complex 3B (TAIR:AT2G33340.2); Has 9286 Blast hits to 5748 proteins in 422 species: Archae - 16; Bacteria - 3151; Metazoa - 2206; Fungi - 2085; Plants - 594; Viruses - 0; Other Eukaryotes - 1234 (source: NCBI BLink). & (gnl|cdd|36486 : 579.0) no description available & (gnl|cdd|71584 : 140.0) no description available & (reliability: 1382.0) & (original description: Putative wdr46, Description = BING4-like, PFAM = PF08149;PF00400)' T '31.3' 'cell.cycle' 'niben101scf03701_319528-334341' '(at4g28980 : 528.0) Encodes a CDK-activating kinase that regulates root initial cell differentiation. Phosphorylates CDKD2 and CDKD3, but not CDKD1. Controls CDK activities and basal transcription.; CDK-activating kinase 1AT (CAK1AT); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase D1;3 (TAIR:AT1G18040.1); Has 87352 Blast hits to 72841 proteins in 3452 species: Archae - 58; Bacteria - 8929; Metazoa - 34591; Fungi - 11921; Plants - 15740; Viruses - 134; Other Eukaryotes - 15979 (source: NCBI BLink). & (gnl|cdd|35814 : 160.0) no description available & (gnl|cdd|29142 : 144.0) no description available & (p29620|kc47_orysa : 120.0) CDC2+/CDC28-related protein kinase R2 (EC 2.7.11.22) - Oryza sativa (Rice) & (reliability: 1056.0) & (original description: Putative ccrk, Description = Cyclin-dependent kinase F-1, PFAM = PF00069;PF00069)' T '31.3' 'cell.cycle' 'niben101scf03713_89540-92928' '(at5g67260 : 304.0) Encode CYCD3;2, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development.; CYCLIN D3;2 (CYCD3;2); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle, regulation of cell proliferation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;3 (TAIR:AT3G50070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35875 : 261.0) no description available & (gnl|cdd|84548 : 101.0) no description available & (reliability: 608.0) & (original description: Putative cycD3b, Description = Cyclin D3b, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben101scf03717_40776-56046' '(at1g70620 : 105.0) cyclin-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 210.0) & (original description: Putative , Description = Putative histone-lysine N-methyltransferase SETD1B-A-like, PFAM = PF15996)' T '31.3' 'cell.cycle' 'niben101scf03781_385883-389226' '(at4g34160 : 231.0) encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1.; CYCLIN D3;1 (CYCD3;1); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;2 (TAIR:AT5G67260.1); Has 3155 Blast hits to 3153 proteins in 309 species: Archae - 0; Bacteria - 0; Metazoa - 1504; Fungi - 362; Plants - 1012; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (gnl|cdd|35875 : 227.0) no description available & (gnl|cdd|84548 : 97.3) no description available & (reliability: 440.0) & (original description: Putative cycD, Description = Cyclin D3, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'niben101scf04024_186689-197578' '(at2g01120 : 560.0) Origin Recognition Complex subunit 4. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with all ORC subunits except ORC1b.; origin recognition complex subunit 4 (ORC4); CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), Origin recognition complex, subunit 4 (InterPro:IPR016527). & (gnl|cdd|37439 : 229.0) no description available & (reliability: 1120.0) & (original description: Putative ORC4, Description = Origin of replication complex subunit 4, PFAM = PF00004;PF14629)' T '31.3' 'cell.cycle' 'niben101scf04122_114066-117902' '(at4g03270 : 169.0) Cyclin D6;1 (CYCD6;1); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: F mature embryo stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D4;1 (TAIR:AT5G65420.1); Has 2035 Blast hits to 2034 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 1002; Fungi - 29; Plants - 874; Viruses - 2; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|35875 : 152.0) no description available & (reliability: 338.0) & (original description: Putative CYCD6, Description = D6-type cyclin, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'niben101scf04283_1063049-1066304' '(at3g63120 : 177.0) cyclin p1;1 (CYCP1;1); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin-related 2 (InterPro:IPR013922), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: cyclin p4;1 (TAIR:AT2G44740.1); Has 1179 Blast hits to 1177 proteins in 221 species: Archae - 0; Bacteria - 18; Metazoa - 258; Fungi - 438; Plants - 231; Viruses - 0; Other Eukaryotes - 234 (source: NCBI BLink). & (gnl|cdd|36887 : 145.0) no description available & (gnl|cdd|72038 : 115.0) no description available & (reliability: 354.0) & (original description: Putative 1, Description = Cyclin p4, PFAM = PF08613)' T '31.3' 'cell.cycle' 'niben101scf04505_697493-713015' '(at2g42260 : 139.0) Encodes a novel plant-specific protein of unknown function. The UVI4 gene is expressed mainly in actively dividing cells. The hypocotyl cells in mutant seedlings undergo one extra round of endoreduplication. The uvi4 mutation also promoted the progression of endo-reduplication during leaf development.; UV-B-INSENSITIVE 4 (UVI4); BEST Arabidopsis thaliana protein match is: UV-B-insensitive 4-like (TAIR:AT3G57860.1); Has 62 Blast hits to 62 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative PYM, Description = Protein POLYCHOME, PFAM = )' T '31.3' 'cell.cycle' 'niben101scf04558_264104-269020' '(p34800|ccn1_antma : 419.0) G2/mitotic-specific cyclin-1 - Antirrhinum majus (Garden snapdragon) & (at5g06150 : 404.0) Encodes a cyclin whose expression is reduced in response to high salt.; CYC1BAT; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN B1;3 (TAIR:AT3G11520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35872 : 284.0) no description available & (gnl|cdd|34629 : 187.0) no description available & (reliability: 808.0) & (original description: Putative cycb, Description = Cyclin B, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben101scf04673_295991-304841' '(at5g41770 : 978.0) crooked neck protein, putative / cell cycle protein, putative; FUNCTIONS IN: binding; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 5514 Blast hits to 2293 proteins in 250 species: Archae - 19; Bacteria - 57; Metazoa - 1995; Fungi - 1739; Plants - 986; Viruses - 0; Other Eukaryotes - 718 (source: NCBI BLink). & (gnl|cdd|37126 : 961.0) no description available & (reliability: 1956.0) & (original description: Putative crn, Description = Protein crooked neck, PFAM = PF02184)' T '31.3' 'cell.cycle' 'niben101scf04775_68798-73917' '(gnl|cdd|38300 : 474.0) no description available & (at4g28510 : 420.0) prohibitin 1 (Atphb1); prohibitin 1 (PHB1); INVOLVED IN: response to stress; LOCATED IN: mitochondrion, plasma membrane, respiratory chain complex I; EXPRESSED IN: 10 plant structures; CONTAINS InterPro DOMAIN/s: Prohibitin (InterPro:IPR000163), Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: prohibitin 6 (TAIR:AT2G20530.2); Has 4079 Blast hits to 4077 proteins in 1204 species: Archae - 185; Bacteria - 2047; Metazoa - 512; Fungi - 318; Plants - 262; Viruses - 12; Other Eukaryotes - 743 (source: NCBI BLink). & (gnl|cdd|48213 : 313.0) no description available & (reliability: 818.0) & (original description: Putative PHB2, Description = Prohibitin-2, mitochondrial, PFAM = PF01145)' T '31.3' 'cell.cycle' 'niben101scf04788_24163-30193' '(at3g10530 : 697.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), BING4, C-terminal (InterPro:IPR012952), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated complex 3B (TAIR:AT2G33340.2); Has 9286 Blast hits to 5748 proteins in 422 species: Archae - 16; Bacteria - 3151; Metazoa - 2206; Fungi - 2085; Plants - 594; Viruses - 0; Other Eukaryotes - 1234 (source: NCBI BLink). & (gnl|cdd|36486 : 585.0) no description available & (gnl|cdd|71584 : 141.0) no description available & (reliability: 1394.0) & (original description: Putative utp7, Description = Probable U3 small nucleolar RNA-associated protein 7, PFAM = PF00400;PF08149)' T '31.3' 'cell.cycle' 'niben101scf04815_118015-137796' '(at5g26850 : 983.0) Uncharacterized protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Uncharacterized protein (TAIR:AT2G41830.1). & (gnl|cdd|37088 : 373.0) no description available & (reliability: 1966.0) & (original description: Putative F383_05118, Description = Protein EFR3 B, PFAM = )' T '31.3' 'cell.cycle' 'niben101scf04854_105273-109315' '(at1g47230 : 400.0) CYCLIN A3;4 (CYCA3;4); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: cyclin-dependent protein kinase 3;2 (TAIR:AT1G47210.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p25010|ccnal_dauca : 385.0) G2/mitotic-specific cyclin C13-1 (A-like cyclin) (Fragment) - Daucus carota (Carrot) & (gnl|cdd|35873 : 296.0) no description available & (gnl|cdd|34629 : 164.0) no description available & (reliability: 800.0) & (original description: Putative cycA3, Description = CycA3, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'niben101scf04926_603577-607293' '(gnl|cdd|35526 : 356.0) no description available & (at4g33270 : 343.0) putative cdc20 protein (CDC20.1); CDC20.1; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT4G33260.1); Has 49595 Blast hits to 24757 proteins in 709 species: Archae - 60; Bacteria - 7548; Metazoa - 19325; Fungi - 10981; Plants - 5978; Viruses - 0; Other Eukaryotes - 5703 (source: NCBI BLink). & (gnl|cdd|29257 : 132.0) no description available & (reliability: 646.0) & (original description: Putative cdc20, Description = Anaphase-promoting complex subunit cdc20, PFAM = PF00400;PF00400;PF00400;PF12894)' T '31.3' 'cell.cycle' 'niben101scf04995_950281-954152' '(at1g47230 : 411.0) CYCLIN A3;4 (CYCA3;4); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: cyclin-dependent protein kinase 3;2 (TAIR:AT1G47210.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p25010|ccnal_dauca : 399.0) G2/mitotic-specific cyclin C13-1 (A-like cyclin) (Fragment) - Daucus carota (Carrot) & (gnl|cdd|35873 : 308.0) no description available & (gnl|cdd|34629 : 162.0) no description available & (reliability: 822.0) & (original description: Putative cycA3, Description = CycA3, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'niben101scf05082_411964-417413' '(at5g45190 : 317.0) Encodes a cyclin T partner CYCT1;5. Plays important roles in infection with Cauliflower mosaic virus (CaMV).; Cyclin family protein; FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Transcription regulator cyclin (InterPro:IPR015429), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT4G19600.1); Has 4079 Blast hits to 3698 proteins in 345 species: Archae - 2; Bacteria - 149; Metazoa - 1860; Fungi - 545; Plants - 474; Viruses - 8; Other Eukaryotes - 1041 (source: NCBI BLink). & (gnl|cdd|36052 : 275.0) no description available & (gnl|cdd|34912 : 127.0) no description available & (reliability: 634.0) & (original description: Putative CYCT, Description = CycT1, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'niben101scf05395_248171-255018' '(at5g11300 : 410.0) mitotic-like cyclin, core cell cycle gene that is expressed only in roots (RT_PCR), portions with mitotic activity only (whole mount in situ).; mitotic-like cyclin 3B from Arabidopsis (CYC3B); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin (InterPro:IPR006670), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: cyclin a2;1 (TAIR:AT5G25380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35873 : 304.0) no description available & (p25010|ccnal_dauca : 271.0) G2/mitotic-specific cyclin C13-1 (A-like cyclin) (Fragment) - Daucus carota (Carrot) & (gnl|cdd|34629 : 169.0) no description available & (reliability: 820.0) & (original description: Putative cycA3, Description = Cyclin-A1-1, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben101scf05643_160842-164433' '(at4g34160 : 264.0) encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1.; CYCLIN D3;1 (CYCD3;1); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;2 (TAIR:AT5G67260.1); Has 3155 Blast hits to 3153 proteins in 309 species: Archae - 0; Bacteria - 0; Metazoa - 1504; Fungi - 362; Plants - 1012; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (gnl|cdd|35875 : 243.0) no description available & (gnl|cdd|84548 : 99.6) no description available & (reliability: 488.0) & (original description: Putative cycD1, Description = Cyclin D3, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben101scf06023_239161-244186' '(at2g42260 : 147.0) Encodes a novel plant-specific protein of unknown function. The UVI4 gene is expressed mainly in actively dividing cells. The hypocotyl cells in mutant seedlings undergo one extra round of endoreduplication. The uvi4 mutation also promoted the progression of endo-reduplication during leaf development.; UV-B-INSENSITIVE 4 (UVI4); BEST Arabidopsis thaliana protein match is: UV-B-insensitive 4-like (TAIR:AT3G57860.1); Has 62 Blast hits to 62 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative GIG1, Description = Protein GIGAS CELL1, PFAM = )' T '31.3' 'cell.cycle' 'niben101scf06132_107293-129948' '(at5g27620 : 208.0) core cell cycle genes; cyclin H;1 (CYCH;1); CONTAINS InterPro DOMAIN/s: Cyclin H (InterPro:IPR015432), Cyclin-like (InterPro:IPR011028), Transcription regulator cyclin (InterPro:IPR015429), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G48640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37707 : 113.0) no description available & (reliability: 416.0) & (original description: Putative adh1C, Description = Cyclin-H1-1, PFAM = PF00134;PF16899)' T '31.3' 'cell.cycle' 'niben101scf06211_145696-151050' '(at1g20610 : 476.0) Cyclin B2;3 (CYCB2;3); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN B2;4 (TAIR:AT1G76310.1); Has 4405 Blast hits to 4396 proteins in 374 species: Archae - 0; Bacteria - 7; Metazoa - 2039; Fungi - 549; Plants - 1150; Viruses - 30; Other Eukaryotes - 630 (source: NCBI BLink). & (q40671|ccnb2_orysa : 443.0) G2/mitotic-specific cyclin-2 (B-like cyclin) (CycOs2) - Oryza sativa (Rice) & (gnl|cdd|35872 : 269.0) no description available & (gnl|cdd|34629 : 184.0) no description available & (reliability: 952.0) & (original description: Putative cyc1, Description = CycB2, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben101scf06516_411256-416519' '(at2g22490 : 270.0) encodes a D-type cyclin whose transcription level is regulated by sucrose but not phytohormones or nitrate. Protein physically interacts with CDC2A. CycD2 kinase activity is regulated by sequestration of CycD2 protein in a form inaccessible to immunoprecipitation and probably not complexed to CDC2A.; Cyclin D2;1 (CYCD2;1); FUNCTIONS IN: protein binding, cyclin-dependent protein kinase regulator activity; INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle, response to sucrose stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D4;1 (TAIR:AT5G65420.1). & (gnl|cdd|35875 : 256.0) no description available & (gnl|cdd|84548 : 118.0) no description available & (reliability: 540.0) & (original description: Putative cycD1, Description = Cyclin-D4-1, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'niben101scf06578_360322-364562' '(at4g03270 : 189.0) Cyclin D6;1 (CYCD6;1); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: F mature embryo stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D4;1 (TAIR:AT5G65420.1); Has 2035 Blast hits to 2034 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 1002; Fungi - 29; Plants - 874; Viruses - 2; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|35875 : 145.0) no description available & (reliability: 378.0) & (original description: Putative 1, Description = D6-type cyclin, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'niben101scf06668_324019-350506' '(at5g41770 : 972.0) crooked neck protein, putative / cell cycle protein, putative; FUNCTIONS IN: binding; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 5514 Blast hits to 2293 proteins in 250 species: Archae - 19; Bacteria - 57; Metazoa - 1995; Fungi - 1739; Plants - 986; Viruses - 0; Other Eukaryotes - 718 (source: NCBI BLink). & (gnl|cdd|37126 : 961.0) no description available & (reliability: 1944.0) & (original description: Putative crn, Description = Crooked neck protein, PFAM = PF02184)' T '31.3' 'cell.cycle' 'niben101scf06698_115760-131042' '(q38772|cdc2a_antma : 572.0) Cell division control protein 2 homolog A (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (at3g48750 : 535.0) A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase.; cell division control 2 (CDC2); FUNCTIONS IN: protein binding, protein kinase activity, cyclin-dependent protein kinase activity, kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B1;2 (TAIR:AT2G38620.2); Has 126125 Blast hits to 124135 proteins in 4221 species: Archae - 112; Bacteria - 14002; Metazoa - 46757; Fungi - 13170; Plants - 30525; Viruses - 484; Other Eukaryotes - 21075 (source: NCBI BLink). & (gnl|cdd|35814 : 439.0) no description available & (gnl|cdd|29142 : 279.0) no description available & (reliability: 1070.0) & (original description: Putative CDC2, Description = Cell division control protein 2 homolog, PFAM = PF00069)' T '31.3' 'cell.cycle' 'niben101scf06754_160330-163805' '(at4g19600 : 100.0) Encodes a cyclin T partner CYCT1;4. Plays important roles in infection with Cauliflower mosaic virus (CaMV).; CYCT1;4; FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle, response to virus, trichome morphogenesis, leaf development; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Transcription regulator cyclin (InterPro:IPR015429), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G45190.1); Has 2421 Blast hits to 2391 proteins in 275 species: Archae - 2; Bacteria - 35; Metazoa - 1157; Fungi - 528; Plants - 373; Viruses - 0; Other Eukaryotes - 326 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative CYCT, Description = CycT1, PFAM = )' T '31.3' 'cell.cycle' 'niben101scf06754_161572-182204' '(at5g45190 : 444.0) Encodes a cyclin T partner CYCT1;5. Plays important roles in infection with Cauliflower mosaic virus (CaMV).; Cyclin family protein; FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Transcription regulator cyclin (InterPro:IPR015429), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT4G19600.1); Has 4079 Blast hits to 3698 proteins in 345 species: Archae - 2; Bacteria - 149; Metazoa - 1860; Fungi - 545; Plants - 474; Viruses - 8; Other Eukaryotes - 1041 (source: NCBI BLink). & (gnl|cdd|36052 : 318.0) no description available & (gnl|cdd|34912 : 152.0) no description available & (p93411|ccnc_orysa : 88.6) G1/S-specific cyclin C-type - Oryza sativa (Rice) & (reliability: 888.0) & (original description: Putative cycK, Description = CycT1, PFAM = PF00134)' T '31.3' 'cell.cycle' 'niben101scf06754_169314-179566' '(at4g19600 : 263.0) Encodes a cyclin T partner CYCT1;4. Plays important roles in infection with Cauliflower mosaic virus (CaMV).; CYCT1;4; FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle, response to virus, trichome morphogenesis, leaf development; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Transcription regulator cyclin (InterPro:IPR015429), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G45190.1); Has 2421 Blast hits to 2391 proteins in 275 species: Archae - 2; Bacteria - 35; Metazoa - 1157; Fungi - 528; Plants - 373; Viruses - 0; Other Eukaryotes - 326 (source: NCBI BLink). & (gnl|cdd|36052 : 185.0) no description available & (gnl|cdd|34912 : 106.0) no description available & (reliability: 526.0) & (original description: Putative cycK, Description = CycT1, PFAM = PF00134)' T '31.3' 'cell.cycle' 'niben101scf06775_103519-115808' '(at2g41830 : 1085.0) Uncharacterized protein; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: Uncharacterized protein (TAIR:AT5G21080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37088 : 456.0) no description available & (reliability: 2170.0) & (original description: Putative TCM_024710, Description = Uncharacterized protein isoform 1, PFAM = )' T '31.3' 'cell.cycle' 'niben101scf06789_43125-55049' '(at4g19600 : 218.0) Encodes a cyclin T partner CYCT1;4. Plays important roles in infection with Cauliflower mosaic virus (CaMV).; CYCT1;4; FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle, response to virus, trichome morphogenesis, leaf development; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Transcription regulator cyclin (InterPro:IPR015429), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G45190.1); Has 2421 Blast hits to 2391 proteins in 275 species: Archae - 2; Bacteria - 35; Metazoa - 1157; Fungi - 528; Plants - 373; Viruses - 0; Other Eukaryotes - 326 (source: NCBI BLink). & (gnl|cdd|36052 : 182.0) no description available & (gnl|cdd|34912 : 92.7) no description available & (reliability: 436.0) & (original description: Putative POPTR_0008s14990g, Description = Cyclin T1 family protein, PFAM = PF00134)' T '31.3' 'cell.cycle' 'niben101scf07242_469353-473249' '(at1g47230 : 417.0) CYCLIN A3;4 (CYCA3;4); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: cyclin-dependent protein kinase 3;2 (TAIR:AT1G47210.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p25010|ccnal_dauca : 386.0) G2/mitotic-specific cyclin C13-1 (A-like cyclin) (Fragment) - Daucus carota (Carrot) & (gnl|cdd|35873 : 311.0) no description available & (gnl|cdd|34629 : 162.0) no description available & (reliability: 834.0) & (original description: Putative cycA3, Description = CycA3, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'niben101scf07260_100875-135024' '(at3g05480 : 496.0) Involved in the regulation of DNA damage repair and homologous recombination.; RAD9; CONTAINS InterPro DOMAIN/s: Rad9 (InterPro:IPR007268), Cell cycle checkpoint, RAD9 (InterPro:IPR016552). & (gnl|cdd|38021 : 241.0) no description available & (gnl|cdd|86559 : 212.0) no description available & (reliability: 992.0) & (original description: Putative RAD9, Description = DNA damage repair protein RAD9, PFAM = PF04139)' T '31.3' 'cell.cycle' 'niben101scf07260_131175-134827' '(at3g05480 : 83.2) Involved in the regulation of DNA damage repair and homologous recombination.; RAD9; CONTAINS InterPro DOMAIN/s: Rad9 (InterPro:IPR007268), Cell cycle checkpoint, RAD9 (InterPro:IPR016552). & (reliability: 166.4) & (original description: Putative , Description = Putative cell cycle checkpoint control protein RAD9A-like, PFAM = )' T '31.3' 'cell.cycle' 'niben101scf07511_38808-43490' '(at5g65420 : 294.0) Encodes a D-type cyclin CYCD4;1 that physically interacts with CDC2A and is expressed during vascular tissue development, embryogenesis, and formation of lateral root primordia. Its expression is upregulated early during germination.Involved in stomatal cell lineage proliferation in the hypocotyl.; CYCLIN D4;1 (CYCD4;1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle, response to sucrose stimulus, stomatal lineage progression; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: cyclin d4;2 (TAIR:AT5G10440.1). & (gnl|cdd|35875 : 241.0) no description available & (gnl|cdd|84548 : 110.0) no description available & (reliability: 588.0) & (original description: Putative cycD1, Description = Carboxy-terminal domain cyclin, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben101scf07937_401671-409079' '(at5g10270 : 688.0) Encodes CDKC;1, part of a CDKC kinase complex that is targeted by Cauliflower mosaic virus (CaMV) for transcriptional activation of viral genes. Also regulates plant growth and development.; cyclin-dependent kinase C;1 (CDKC;1); FUNCTIONS IN: kinase activity; INVOLVED IN: response to virus, leaf development; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin dependent kinase group C2 (TAIR:AT5G64960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35820 : 549.0) no description available & (p28567|cdc22_pea : 278.0) Cell division control protein 2 homolog 2 (EC 2.7.11.22) (EC 2.7.11.23) (Fragment) - Pisum sativum (Garden pea) & (gnl|cdd|29142 : 275.0) no description available & (reliability: 1376.0) & (original description: Putative cdk, Description = Cyclin-dependent kinase 12, PFAM = PF00069)' T '31.3' 'cell.cycle' 'niben101scf07953_32191-38705' '(at1g03780 : 586.0) Homolog of vertebrate TPX2. Protein has three domains involved in nuclear targeting, one in nuclear export and two in microtubule binding. Involved in mitotic spindle assembly during late prophase and early prometaphase.; targeting protein for XKLP2 (TPX2); FUNCTIONS IN: microtubule binding; INVOLVED IN: spindle assembly; LOCATED IN: nucleus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cell cycle regulated microtubule associated protein (InterPro:IPR022021), Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT5G44270.1). & (reliability: 1172.0) & (original description: Putative TPX2, Description = Protein TPX2, PFAM = PF06886;PF12214)' T '31.3' 'cell.cycle' 'niben101scf07965_464448-478013' '(at5g27620 : 369.0) core cell cycle genes; cyclin H;1 (CYCH;1); CONTAINS InterPro DOMAIN/s: Cyclin H (InterPro:IPR015432), Cyclin-like (InterPro:IPR011028), Transcription regulator cyclin (InterPro:IPR015429), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G48640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37707 : 218.0) no description available & (gnl|cdd|34912 : 114.0) no description available & (reliability: 738.0) & (original description: Putative adh1C, Description = Cyclin-H1-1, PFAM = PF16899;PF00134)' T '31.3' 'cell.cycle' 'niben101scf09153_279193-285285' '(at3g21870 : 215.0) cyclin p2;1 (CYCP2;1); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin-related 2 (InterPro:IPR013922), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: cyclin p4;1 (TAIR:AT2G44740.1); Has 1311 Blast hits to 1303 proteins in 220 species: Archae - 0; Bacteria - 18; Metazoa - 222; Fungi - 576; Plants - 231; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (gnl|cdd|36887 : 143.0) no description available & (gnl|cdd|72038 : 115.0) no description available & (reliability: 430.0) & (original description: Putative 1, Description = Cyclin p4, PFAM = PF08613)' T '31.3' 'cell.cycle' 'niben101scf09505_216548-221526' '(at3g19650 : 82.0) cyclin-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 5668 Blast hits to 3895 proteins in 309 species: Archae - 0; Bacteria - 250; Metazoa - 3167; Fungi - 631; Plants - 477; Viruses - 7; Other Eukaryotes - 1136 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative , Description = , PFAM = PF09405)' T '31.3' 'cell.cycle' 'niben101scf09885_179637-182341' '(at2g01905 : 211.0) cyclin J18 (cycJ18); cyclin J18 (CYCJ18); CONTAINS InterPro DOMAIN/s: Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative Os03g0237900, Description = Cyclin-J18-like, PFAM = PF00134)' T '31.3' 'cell.cycle' 'niben101scf10144_110898-115088' '(at3g05330 : 233.0) Encodes a protein with moderate sequence similarity to the maize microtubule-binding protein TANGLED1. A single base-pair deletion (-A) at position Chr3:1519176 in Columbia relative to the Landsberg erecta and Achkarren-2 ecotype (see ESTs DR378436 and CB26450) introduces a frame-shift and premature termination codon. The protein encoded from the Columbia gene is truncated by 29 amino acids relative to the Landsberg erecta and Achkarren-2 encoded proteins. Involved in the identification of the division plane during mitosis amd cytokinesis; TANGLED (ATN); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytokinesis, initiation of separation, phragmoplast assembly; LOCATED IN: microtubule associated complex, preprophase band; EXPRESSED IN: cultured cell; Has 705 Blast hits to 473 proteins in 108 species: Archae - 0; Bacteria - 3; Metazoa - 504; Fungi - 31; Plants - 75; Viruses - 28; Other Eukaryotes - 64 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative TAN, Description = Microtubule-binding protein TANGLED, PFAM = )' T '31.3' 'cell.cycle' 'niben101scf11424_22436-26799' '(gnl|cdd|38300 : 464.0) no description available & (at4g28510 : 416.0) prohibitin 1 (Atphb1); prohibitin 1 (PHB1); INVOLVED IN: response to stress; LOCATED IN: mitochondrion, plasma membrane, respiratory chain complex I; EXPRESSED IN: 10 plant structures; CONTAINS InterPro DOMAIN/s: Prohibitin (InterPro:IPR000163), Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: prohibitin 6 (TAIR:AT2G20530.2); Has 4079 Blast hits to 4077 proteins in 1204 species: Archae - 185; Bacteria - 2047; Metazoa - 512; Fungi - 318; Plants - 262; Viruses - 12; Other Eukaryotes - 743 (source: NCBI BLink). & (gnl|cdd|48213 : 312.0) no description available & (reliability: 808.0) & (original description: Putative PHB2, Description = Prohibitin-2, mitochondrial, PFAM = PF01145)' T '31.3' 'cell.cycle' 'niben101scf11676_61410-66957' '(at2g26430 : 447.0) Encodes an ania-6a type arginine-rich cyclin which confers tolerance to LiCl and NaCl when expressed in yeast.; arginine-rich cyclin 1 (RCY1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: response to salt stress, regulation of cell cycle, regulation of transcription; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin L (InterPro:IPR017060), Cyclin-like (InterPro:IPR011028), Transcription regulator cyclin (InterPro:IPR015429), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G45190.1); Has 13929 Blast hits to 7818 proteins in 361 species: Archae - 16; Bacteria - 504; Metazoa - 7801; Fungi - 1963; Plants - 1370; Viruses - 16; Other Eukaryotes - 2259 (source: NCBI BLink). & (gnl|cdd|36053 : 308.0) no description available & (gnl|cdd|34912 : 107.0) no description available & (reliability: 894.0) & (original description: Putative cycL, Description = Arginine-rich cyclin 1, PFAM = PF00134)' T '31.3' 'cell.cycle' 'niben101scf12969_72413-77978' '(at1g70210 : 369.0) Encodes a D-type cyclin that physically interacts with CDC2A. Its expression is upregulated early during germination.; CYCLIN D1;1 (CYCD1;1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin D2;1 (TAIR:AT2G22490.1); Has 3455 Blast hits to 3453 proteins in 343 species: Archae - 0; Bacteria - 0; Metazoa - 1586; Fungi - 382; Plants - 1073; Viruses - 13; Other Eukaryotes - 401 (source: NCBI BLink). & (gnl|cdd|35875 : 273.0) no description available & (gnl|cdd|84548 : 110.0) no description available & (reliability: 738.0) & (original description: Putative cycD, Description = Cyclin-D1-1, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben101scf13523_21673-26394' '(at4g19600 : 292.0) Encodes a cyclin T partner CYCT1;4. Plays important roles in infection with Cauliflower mosaic virus (CaMV).; CYCT1;4; FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle, response to virus, trichome morphogenesis, leaf development; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Transcription regulator cyclin (InterPro:IPR015429), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G45190.1); Has 2421 Blast hits to 2391 proteins in 275 species: Archae - 2; Bacteria - 35; Metazoa - 1157; Fungi - 528; Plants - 373; Viruses - 0; Other Eukaryotes - 326 (source: NCBI BLink). & (gnl|cdd|36052 : 271.0) no description available & (gnl|cdd|34912 : 125.0) no description available & (reliability: 584.0) & (original description: Putative CYCT, Description = CycT1, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben101scf13527_73219-82437' '(at2g37560 : 452.0) Origin Recognition Complex subunit 2. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts strongly with all ORC subunits.; origin recognition complex second largest subunit 2 (ORC2); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 2 (InterPro:IPR007220); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38139 : 302.0) no description available & (gnl|cdd|86535 : 291.0) no description available & (reliability: 904.0) & (original description: Putative orc2, Description = Origin recognition complex subunit 2, PFAM = PF04084)' T '31.3' 'cell.cycle' 'niben101scf13527_73681-82441' '(at2g37560 : 494.0) Origin Recognition Complex subunit 2. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts strongly with all ORC subunits.; origin recognition complex second largest subunit 2 (ORC2); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 2 (InterPro:IPR007220); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38139 : 324.0) no description available & (gnl|cdd|86535 : 306.0) no description available & (reliability: 988.0) & (original description: Putative ORC2, Description = Origin of replication complex subunit 2, PFAM = PF04084)' T '31.3' 'cell.cycle' 'niben101scf13741_218072-228346' '(at1g47230 : 334.0) CYCLIN A3;4 (CYCA3;4); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: cyclin-dependent protein kinase 3;2 (TAIR:AT1G47210.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p25010|ccnal_dauca : 328.0) G2/mitotic-specific cyclin C13-1 (A-like cyclin) (Fragment) - Daucus carota (Carrot) & (gnl|cdd|35873 : 270.0) no description available & (gnl|cdd|84548 : 157.0) no description available & (reliability: 668.0) & (original description: Putative cycA3, Description = Carboxy-terminal domain cyclin, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'niben101scf14308_95806-100959' '(at5g48820 : 134.0) Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. Binds to D type and CDC2A cyclins and may inhibit cell cycle. Seven KRP genes were found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization.; inhibitor/interactor with cyclin-dependent kinase (ICK6); CONTAINS InterPro DOMAIN/s: Cyclin-dependent kinase inhibitor (InterPro:IPR003175), Cyclin-dependent kinase inhibitor, plant (InterPro:IPR016701); BEST Arabidopsis thaliana protein match is: Cyclin-dependent kinase inhibitor family protein (TAIR:AT3G24810.1). & (reliability: 268.0) & (original description: Putative krp1, Description = P27KIP1-related-protein 1, PFAM = PF02234)' T '31.3' 'cell.cycle' 'niben101scf14427_51943-63444' '(at5g01630 : 889.0) Ortholog of breast cancer susceptibility protein 2. Essential at meiosis. Interacts with with both Rad51 and Dss1(I) or both Dmc1 and Dss1(I) in a tripartite complex.; BRCA2-like B (BRCA2B); FUNCTIONS IN: single-stranded DNA binding; INVOLVED IN: meiosis; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA recombination/repair protein BRCA2, helical domain (InterPro:IPR015252), DNA recombination and repair protein, BRCA2 (InterPro:IPR011370), BRCA2, oligonucleotide/oligosaccharide-binding 1 (InterPro:IPR015187), Breast cancer type 2 susceptibility protein (InterPro:IPR015525), BRCA2 repeat (InterPro:IPR002093); BEST Arabidopsis thaliana protein match is: BREAST CANCER 2 like 2A (TAIR:AT4G00020.1); Has 281 Blast hits to 210 proteins in 91 species: Archae - 0; Bacteria - 4; Metazoa - 134; Fungi - 18; Plants - 61; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|39948 : 321.0) no description available & (gnl|cdd|72966 : 193.0) no description available & (reliability: 1778.0) & (original description: Putative BRCA2B, Description = Protein BREAST CANCER SUSCEPTIBILITY 2 homolog B, PFAM = PF09103;PF00634;PF00634;PF00634;PF09169)' T '31.3' 'cell.cycle' 'niben101scf16022_233313-240704' '(at4g22910 : 653.0) FIZZY-related 2 (FZR2); FUNCTIONS IN: signal transducer activity; INVOLVED IN: trichome branching, signal transduction, DNA endoreduplication, cell growth; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: cell cycle switch protein 52 A2 (TAIR:AT4G11920.1); Has 43458 Blast hits to 22953 proteins in 693 species: Archae - 46; Bacteria - 6865; Metazoa - 16440; Fungi - 9775; Plants - 5102; Viruses - 0; Other Eukaryotes - 5230 (source: NCBI BLink). & (gnl|cdd|35526 : 474.0) no description available & (gnl|cdd|29257 : 136.0) no description available & (reliability: 1306.0) & (original description: Putative FZR2, Description = Protein FIZZY-RELATED 2, PFAM = PF12894;PF00400;PF00400;PF00400)' T '31.3' 'cell.cycle' 'niben101scf22623_59108-63962' '(at5g48820 : 130.0) Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. Binds to D type and CDC2A cyclins and may inhibit cell cycle. Seven KRP genes were found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization.; inhibitor/interactor with cyclin-dependent kinase (ICK6); CONTAINS InterPro DOMAIN/s: Cyclin-dependent kinase inhibitor (InterPro:IPR003175), Cyclin-dependent kinase inhibitor, plant (InterPro:IPR016701); BEST Arabidopsis thaliana protein match is: Cyclin-dependent kinase inhibitor family protein (TAIR:AT3G24810.1). & (reliability: 260.0) & (original description: Putative krp2, Description = P27KIP1-related-protein 2, PFAM = PF02234)' T '31.3' 'cell.cycle' 'niben101scf25021_40014-43488' '(gnl|cdd|35875 : 147.0) no description available & (at4g37630 : 123.0) core cell cycle genes; cyclin d5;1 (CYCD5;1); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D1;1 (TAIR:AT1G70210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative CYCD5, Description = D5-type cyclin, PFAM = PF02984;PF00134)' T '31.3' 'cell.cycle' 'niben101scf28115_180879-198860' '(gnl|cdd|35875 : 134.0) no description available & (at1g70210 : 101.0) Encodes a D-type cyclin that physically interacts with CDC2A. Its expression is upregulated early during germination.; CYCLIN D1;1 (CYCD1;1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin D2;1 (TAIR:AT2G22490.1); Has 3455 Blast hits to 3453 proteins in 343 species: Archae - 0; Bacteria - 0; Metazoa - 1586; Fungi - 382; Plants - 1073; Viruses - 13; Other Eukaryotes - 401 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative 1, Description = D7-type cyclin, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben101scf28115_194845-198881' '(gnl|cdd|35875 : 170.0) no description available & (at5g02110 : 128.0) CYCLIN D7;1 (CYCD7;1); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;2 (TAIR:AT5G67260.1); Has 2441 Blast hits to 2441 proteins in 290 species: Archae - 0; Bacteria - 0; Metazoa - 935; Fungi - 354; Plants - 916; Viruses - 0; Other Eukaryotes - 236 (source: NCBI BLink). & (gnl|cdd|84548 : 93.4) no description available & (reliability: 256.0) & (original description: Putative CYCD7, Description = D7-type cyclin, PFAM = PF00134;PF02984)' T '31.3' 'cell.cycle' 'niben101scf38394_14614-22161' '(at4g19600 : 211.0) Encodes a cyclin T partner CYCT1;4. Plays important roles in infection with Cauliflower mosaic virus (CaMV).; CYCT1;4; FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle, response to virus, trichome morphogenesis, leaf development; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Transcription regulator cyclin (InterPro:IPR015429), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G45190.1); Has 2421 Blast hits to 2391 proteins in 275 species: Archae - 2; Bacteria - 35; Metazoa - 1157; Fungi - 528; Plants - 373; Viruses - 0; Other Eukaryotes - 326 (source: NCBI BLink). & (gnl|cdd|36052 : 177.0) no description available & (gnl|cdd|34912 : 90.4) no description available & (reliability: 422.0) & (original description: Putative TCM_020578, Description = Cyclin family protein isoform 2, PFAM = PF00134)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'nbv0.3scaffold2716_40830-63830' '(at1g01940 : 293.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: plant U-box 49 (TAIR:AT5G67530.1); Has 17692 Blast hits to 17552 proteins in 2716 species: Archae - 108; Bacteria - 7521; Metazoa - 2867; Fungi - 1402; Plants - 1253; Viruses - 0; Other Eukaryotes - 4541 (source: NCBI BLink). & (gnl|cdd|29399 : 280.0) no description available & (gnl|cdd|36102 : 228.0) no description available & (q39613|cyph_catro : 102.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 586.0) & (original description: Putative cyp4, Description = PPIase, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'nbv0.3scaffold8910_34767-40180' '(at5g58710 : 295.0) Encodes cyclophilin ROC7.; rotamase CYP 7 (ROC7); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, root development; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: cyclophilin 5 (TAIR:AT2G29960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29397 : 282.0) no description available & (gnl|cdd|36098 : 250.0) no description available & (o49886|cyph_luplu : 217.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Lupinus luteus (European yellow lupin) & (reliability: 590.0) & (original description: Putative cyc, Description = PPIase, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'nbv0.3scaffold16773_12688-16421' '(at5g67530 : 390.0) plant U-box 49 (PUB49); FUNCTIONS IN: ubiquitin-protein ligase activity, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), U box domain (InterPro:IPR003613), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT1G01940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36101 : 378.0) no description available & (gnl|cdd|29394 : 277.0) no description available & (q39613|cyph_catro : 110.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 780.0) & (original description: Putative PPIL2, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'nbv0.3scaffold19481_8671-21293' '(at3g15520 : 555.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: cyclophilin 38 (TAIR:AT3G01480.1); Has 713 Blast hits to 711 proteins in 154 species: Archae - 5; Bacteria - 374; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 246 (source: NCBI BLink). & (gnl|cdd|29395 : 162.0) no description available & (o49939|tlp40_spiol : 140.0) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (40 kDa thylakoid lumen PPIase) (40 kDa thylakoid lumen rotamase) - Spinacia oleracea (Spinach) & (reliability: 1110.0) & (original description: Putative CYP37, Description = Peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'nbv0.3scaffold21156_20700-35685' '(at3g15520 : 548.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: cyclophilin 38 (TAIR:AT3G01480.1); Has 713 Blast hits to 711 proteins in 154 species: Archae - 5; Bacteria - 374; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 246 (source: NCBI BLink). & (gnl|cdd|29395 : 160.0) no description available & (o49939|tlp40_spiol : 140.0) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (40 kDa thylakoid lumen PPIase) (40 kDa thylakoid lumen rotamase) - Spinacia oleracea (Spinach) & (reliability: 1096.0) & (original description: Putative CYP, Description = Peptidylprolyl cis-tans isomerase/cyclophilin, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'nbv0.3scaffold33312_10665-23043' '(at3g54010 : 743.0) Immunophilin-like protein similar to the p59 FK506-binding protein (FKBP52). Shows rotamase activity and contains an FKBP-like domain and three tetratricopeptide repeat units. Members of this class of mutation show ectopic cell proliferation in cotyledons. Gene may be alternatively spliced.; PASTICCINO 1 (PAS1); FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity, binding; INVOLVED IN: in 9 processes; LOCATED IN: endoplasmic reticulum, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: rotamase FKBP 1 (TAIR:AT3G25230.2); Has 6249 Blast hits to 5494 proteins in 451 species: Archae - 36; Bacteria - 312; Metazoa - 2945; Fungi - 683; Plants - 1187; Viruses - 0; Other Eukaryotes - 1086 (source: NCBI BLink). & (gnl|cdd|35763 : 278.0) no description available & (q43207|fkb70_wheat : 186.0) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) & (reliability: 1486.0) & (original description: Putative PAS1, Description = Peptidyl-prolyl cis-trans isomerase PASTICCINO1, PFAM = PF00254;PF00254;PF00254;PF13181;PF07719)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'nbv0.3scaffold39025_8039-14897' '(at2g15790 : 505.0) SQN encodes the Arabidopsis homolog of cyclophilin 40 (CyP40). It is specifically required for the vegetative but not the reproductive maturation of the shoot.; SQUINT (SQN); CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G63400.3); Has 20219 Blast hits to 19939 proteins in 2706 species: Archae - 114; Bacteria - 6925; Metazoa - 4764; Fungi - 1760; Plants - 1912; Viruses - 4; Other Eukaryotes - 4740 (source: NCBI BLink). & (gnl|cdd|35766 : 440.0) no description available & (gnl|cdd|29397 : 270.0) no description available & (o49886|cyph_luplu : 200.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Lupinus luteus (European yellow lupin) & (reliability: 1010.0) & (original description: Putative CYP40, Description = Peptidyl-prolyl cis-trans isomerase CYP40, PFAM = PF00160;PF00515)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'nbv0.3scaffold47493_10097-15988' '(at5g13120 : 302.0) Encodes a lumenal cyclophilin with peptidyl-prolyl isomerase activity that is associated with the NAD(P)H dehydrogenase complex in stromal regions of the thylakoid membrane. It is likely to be important for the accumulation of the hydrophobic domain of the NAD(P)H dehydrogenase complex. This complex is associated with PSI and is responsible for the reduction of plastoquinone.; cyclophilin 20-2 (CYP20-2); CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: rotamase CYP 4 (TAIR:AT3G62030.1). & (gnl|cdd|36098 : 282.0) no description available & (gnl|cdd|29397 : 274.0) no description available & (q41651|cypb_vicfa : 219.0) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) (CYP B) - Vicia faba (Broad bean) & (reliability: 604.0) & (original description: Putative PNSL5, Description = Photosynthetic NDH subunit of lumenal location 5, chloroplastic, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'nbv0.3scaffold52039_4014-10941' '(at3g66654 : 209.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT2G47320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36100 : 148.0) no description available & (gnl|cdd|29390 : 93.4) no description available & (reliability: 418.0) & (original description: Putative CYP21-4, Description = Peptidyl-prolyl cis-trans isomerase CYP21-4, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'nbv0.3scaffold55745_5258-11623' '(at5g48570 : 480.0) FKBP-type peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity, calmodulin binding; INVOLVED IN: protein folding; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: rotamase FKBP 1 (TAIR:AT3G25230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43207|fkb70_wheat : 457.0) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) & (gnl|cdd|35763 : 227.0) no description available & (gnl|cdd|30891 : 124.0) no description available & (reliability: 960.0) & (original description: Putative FKBP65, Description = Peptidyl-prolyl cis-trans isomerase FKBP65, PFAM = PF00515;PF00254;PF00254;PF00254)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'nbv0.3scaffold59382_6196-11674' '(gnl|cdd|36099 : 284.0) no description available & (at2g36130 : 272.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: cyclophilin71 (TAIR:AT3G44600.1); Has 17839 Blast hits to 17712 proteins in 2717 species: Archae - 108; Bacteria - 7579; Metazoa - 2864; Fungi - 1418; Plants - 1272; Viruses - 0; Other Eukaryotes - 4598 (source: NCBI BLink). & (gnl|cdd|29393 : 242.0) no description available & (q39613|cyph_catro : 108.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 544.0) & (original description: Putative cyp1, Description = PPIase, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'nbv0.5scaffold6_1538228-1542153' '(gnl|cdd|29397 : 289.0) no description available & (gnl|cdd|35766 : 269.0) no description available & (at3g56070 : 249.0) rotamase cyclophilin 2 (ROC2) exhibiting peptidyl-prolyl cis-trans isomerase activity involved in signal transduction.; rotamase cyclophilin 2 (ROC2); CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: rotamase CYP 3 (TAIR:AT2G16600.1); Has 16518 Blast hits to 16486 proteins in 2631 species: Archae - 108; Bacteria - 6748; Metazoa - 2914; Fungi - 1377; Plants - 1262; Viruses - 4; Other Eukaryotes - 4105 (source: NCBI BLink). & (o49886|cyph_luplu : 234.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Lupinus luteus (European yellow lupin) & (reliability: 498.0) & (original description: Putative cyp1, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'nbv0.5scaffold1411_409400-422747' '(at4g34960 : 294.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: Golgi apparatus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: cyclophilin 5 (TAIR:AT2G29960.1); Has 16085 Blast hits to 16059 proteins in 2650 species: Archae - 108; Bacteria - 6649; Metazoa - 2891; Fungi - 1367; Plants - 1258; Viruses - 4; Other Eukaryotes - 3808 (source: NCBI BLink). & (gnl|cdd|29397 : 243.0) no description available & (gnl|cdd|36098 : 238.0) no description available & (q39613|cyph_catro : 194.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 588.0) & (original description: Putative cyp, Description = PPIase, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'nbv0.5scaffold1579_153165-159172' '(at3g25230 : 738.0) Encodes a a high molecular weight member of the FK506 binding protein (FKBP) family. It has three FKBP12-like domains, tetratricopeptide repeats, and a putative calmodulin binding domain. Modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs.; rotamase FKBP 1 (ROF1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-type peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT5G48570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43207|fkb70_wheat : 683.0) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) & (gnl|cdd|35763 : 293.0) no description available & (gnl|cdd|84647 : 138.0) no description available & (reliability: 1476.0) & (original description: Putative FKBP62, Description = Peptidyl-prolyl cis-trans isomerase FKBP62, PFAM = PF00254;PF00254;PF00254;PF00515)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'nbv0.5scaffold3676_9212-16070' '(at2g15790 : 374.0) SQN encodes the Arabidopsis homolog of cyclophilin 40 (CyP40). It is specifically required for the vegetative but not the reproductive maturation of the shoot.; SQUINT (SQN); CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G63400.3); Has 20219 Blast hits to 19939 proteins in 2706 species: Archae - 114; Bacteria - 6925; Metazoa - 4764; Fungi - 1760; Plants - 1912; Viruses - 4; Other Eukaryotes - 4740 (source: NCBI BLink). & (gnl|cdd|35766 : 298.0) no description available & (gnl|cdd|29397 : 139.0) no description available & (p21569|cyph_maize : 101.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Zea mays (Maize) & (reliability: 748.0) & (original description: Putative PPID, Description = Peptidyl-prolyl cis-trans isomerase CYP40, PFAM = PF00515;PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben044scf00000755ctg015_694-10470' '(gnl|cdd|29397 : 209.0) no description available & (at4g32420 : 199.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G63400.3). & (gnl|cdd|35766 : 190.0) no description available & (p21569|cyph_maize : 154.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Zea mays (Maize) & (reliability: 398.0) & (original description: Putative cyp1, Description = PPIase, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben044scf00009386ctg003_7729-12992' '(at3g15520 : 300.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: cyclophilin 38 (TAIR:AT3G01480.1); Has 713 Blast hits to 711 proteins in 154 species: Archae - 5; Bacteria - 374; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 246 (source: NCBI BLink). & (gnl|cdd|29395 : 157.0) no description available & (o49939|tlp40_spiol : 93.2) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (40 kDa thylakoid lumen PPIase) (40 kDa thylakoid lumen rotamase) - Spinacia oleracea (Spinach) & (reliability: 600.0) & (original description: Putative CYP37, Description = Peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben044scf00011586ctg002_1-7778' '(at2g15790 : 454.0) SQN encodes the Arabidopsis homolog of cyclophilin 40 (CyP40). It is specifically required for the vegetative but not the reproductive maturation of the shoot.; SQUINT (SQN); CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G63400.3); Has 20219 Blast hits to 19939 proteins in 2706 species: Archae - 114; Bacteria - 6925; Metazoa - 4764; Fungi - 1760; Plants - 1912; Viruses - 4; Other Eukaryotes - 4740 (source: NCBI BLink). & (gnl|cdd|35766 : 383.0) no description available & (gnl|cdd|29397 : 253.0) no description available & (q39613|cyph_catro : 190.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 908.0) & (original description: Putative CYP40, Description = Peptidyl-prolyl cis-trans isomerase CYP40, PFAM = PF13181;PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben044scf00017507ctg010_541-8784' '(at5g58710 : 298.0) Encodes cyclophilin ROC7.; rotamase CYP 7 (ROC7); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, root development; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: cyclophilin 5 (TAIR:AT2G29960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29397 : 291.0) no description available & (gnl|cdd|35766 : 257.0) no description available & (q39613|cyph_catro : 223.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 596.0) & (original description: Putative cyc, Description = PPIase, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben044scf00028131ctg001_1-6944' '(at3g25220 : 199.0) immunophilin (FKBP15-1); FK506-binding protein 15 kD-1 (FKBP15-1); FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FK506- and rapamycin-binding protein 15 kD-2 (TAIR:AT5G48580.1); Has 11255 Blast hits to 10633 proteins in 1849 species: Archae - 158; Bacteria - 6135; Metazoa - 1894; Fungi - 499; Plants - 818; Viruses - 0; Other Eukaryotes - 1751 (source: NCBI BLink). & (q41649|fkb15_vicfa : 194.0) FK506-binding protein 2 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (15 kDa FKBP) (FKBP-15) - Vicia faba (Broad bean) & (gnl|cdd|35769 : 188.0) no description available & (gnl|cdd|84647 : 133.0) no description available & (reliability: 398.0) & (original description: Putative fpr3, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00254)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben044scf00028762ctg011_210-3774' '(at5g48570 : 192.0) FKBP-type peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity, calmodulin binding; INVOLVED IN: protein folding; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: rotamase FKBP 1 (TAIR:AT3G25230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43207|fkb70_wheat : 178.0) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) & (gnl|cdd|35763 : 95.0) no description available & (gnl|cdd|84647 : 84.1) no description available & (reliability: 384.0) & (original description: Putative ROF1, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00254;PF00254)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben044scf00042793ctg002_1-10455' '(at1g26940 : 351.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: cyclophilin71 (TAIR:AT3G44600.1); Has 11471 Blast hits to 11465 proteins in 2220 species: Archae - 104; Bacteria - 5913; Metazoa - 1282; Fungi - 864; Plants - 581; Viruses - 0; Other Eukaryotes - 2727 (source: NCBI BLink). & (gnl|cdd|29390 : 128.0) no description available & (reliability: 702.0) & (original description: Putative CYP23, Description = Peptidyl-prolyl cis-trans isomerase CYP23, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben044scf00042936ctg006_832-9522' '(at5g13120 : 303.0) Encodes a lumenal cyclophilin with peptidyl-prolyl isomerase activity that is associated with the NAD(P)H dehydrogenase complex in stromal regions of the thylakoid membrane. It is likely to be important for the accumulation of the hydrophobic domain of the NAD(P)H dehydrogenase complex. This complex is associated with PSI and is responsible for the reduction of plastoquinone.; cyclophilin 20-2 (CYP20-2); CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: rotamase CYP 4 (TAIR:AT3G62030.1). & (gnl|cdd|36098 : 285.0) no description available & (gnl|cdd|29397 : 275.0) no description available & (q41651|cypb_vicfa : 220.0) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) (CYP B) - Vicia faba (Broad bean) & (reliability: 606.0) & (original description: Putative PNSL5, Description = Photosynthetic NDH subunit of lumenal location 5, chloroplastic, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben044scf00050688ctg004_13279-24278' '(at5g35100 : 283.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, peptidyl-cysteine S-nitrosylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: cyclophilin 5 (TAIR:AT2G29960.2); Has 4084 Blast hits to 4084 proteins in 692 species: Archae - 13; Bacteria - 526; Metazoa - 1613; Fungi - 701; Plants - 735; Viruses - 0; Other Eukaryotes - 496 (source: NCBI BLink). & (gnl|cdd|36098 : 96.5) no description available & (gnl|cdd|64045 : 89.9) no description available & (reliability: 566.0) & (original description: Putative CYP28, Description = Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf00077_562992-569357' '(at5g48570 : 448.0) FKBP-type peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity, calmodulin binding; INVOLVED IN: protein folding; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: rotamase FKBP 1 (TAIR:AT3G25230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43207|fkb70_wheat : 435.0) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) & (gnl|cdd|35763 : 223.0) no description available & (gnl|cdd|30891 : 124.0) no description available & (reliability: 896.0) & (original description: Putative FKBP62, Description = Peptidyl-prolyl cis-trans isomerase FKBP62, PFAM = PF00515;PF00254;PF00254;PF00254)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf00144_311801-323952' '(gnl|cdd|36099 : 285.0) no description available & (at2g36130 : 271.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: cyclophilin71 (TAIR:AT3G44600.1); Has 17839 Blast hits to 17712 proteins in 2717 species: Archae - 108; Bacteria - 7579; Metazoa - 2864; Fungi - 1418; Plants - 1272; Viruses - 0; Other Eukaryotes - 4598 (source: NCBI BLink). & (gnl|cdd|29393 : 244.0) no description available & (q39613|cyph_catro : 109.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 542.0) & (original description: Putative cyp1, Description = PPIase, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf00211_32679-35194' '(gnl|cdd|29397 : 297.0) no description available & (o49886|cyph_luplu : 269.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Lupinus luteus (European yellow lupin) & (gnl|cdd|36083 : 263.0) no description available & (at2g21130 : 259.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: rotamase CYP 1 (TAIR:AT4G38740.1); Has 16606 Blast hits to 16571 proteins in 2692 species: Archae - 108; Bacteria - 6886; Metazoa - 2917; Fungi - 1384; Plants - 1286; Viruses - 4; Other Eukaryotes - 4021 (source: NCBI BLink). & (reliability: 518.0) & (original description: Putative CYP, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf00439_495735-512157' '(at4g33060 : 499.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: cyclophilin71 (TAIR:AT3G44600.1); Has 24116 Blast hits to 22276 proteins in 2786 species: Archae - 119; Bacteria - 7703; Metazoa - 5717; Fungi - 2149; Plants - 1502; Viruses - 35; Other Eukaryotes - 6891 (source: NCBI BLink). & (gnl|cdd|36103 : 322.0) no description available & (gnl|cdd|29396 : 299.0) no description available & (reliability: 998.0) & (original description: Putative CYP57, Description = Peptidyl-prolyl cis-trans isomerase CYP57, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf00457_992871-1006419' '(at3g66654 : 256.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT2G47320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36100 : 172.0) no description available & (gnl|cdd|29390 : 115.0) no description available & (reliability: 512.0) & (original description: Putative CYP21-4, Description = Peptidyl-prolyl cis-trans isomerase CYP21-4, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf00467_85386-89341' '(gnl|cdd|29397 : 291.0) no description available & (gnl|cdd|35766 : 269.0) no description available & (at3g56070 : 253.0) rotamase cyclophilin 2 (ROC2) exhibiting peptidyl-prolyl cis-trans isomerase activity involved in signal transduction.; rotamase cyclophilin 2 (ROC2); CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: rotamase CYP 3 (TAIR:AT2G16600.1); Has 16518 Blast hits to 16486 proteins in 2631 species: Archae - 108; Bacteria - 6748; Metazoa - 2914; Fungi - 1377; Plants - 1262; Viruses - 4; Other Eukaryotes - 4105 (source: NCBI BLink). & (o49886|cyph_luplu : 236.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Lupinus luteus (European yellow lupin) & (reliability: 506.0) & (original description: Putative cyc, Description = PPIase, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf00478_549077-572508' '(at1g01940 : 290.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: plant U-box 49 (TAIR:AT5G67530.1); Has 17692 Blast hits to 17552 proteins in 2716 species: Archae - 108; Bacteria - 7521; Metazoa - 2867; Fungi - 1402; Plants - 1253; Viruses - 0; Other Eukaryotes - 4541 (source: NCBI BLink). & (gnl|cdd|29399 : 281.0) no description available & (gnl|cdd|36102 : 227.0) no description available & (q39613|cyph_catro : 102.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 580.0) & (original description: Putative cyp4, Description = PPIase, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf00542_826554-830457' '(at3g54010 : 263.0) Immunophilin-like protein similar to the p59 FK506-binding protein (FKBP52). Shows rotamase activity and contains an FKBP-like domain and three tetratricopeptide repeat units. Members of this class of mutation show ectopic cell proliferation in cotyledons. Gene may be alternatively spliced.; PASTICCINO 1 (PAS1); FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity, binding; INVOLVED IN: in 9 processes; LOCATED IN: endoplasmic reticulum, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: rotamase FKBP 1 (TAIR:AT3G25230.2); Has 6249 Blast hits to 5494 proteins in 451 species: Archae - 36; Bacteria - 312; Metazoa - 2945; Fungi - 683; Plants - 1187; Viruses - 0; Other Eukaryotes - 1086 (source: NCBI BLink). & (gnl|cdd|35763 : 123.0) no description available & (reliability: 526.0) & (original description: Putative DEI1, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00254)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf00853_265067-272534' '(gnl|cdd|36101 : 382.0) no description available & (at5g67530 : 350.0) plant U-box 49 (PUB49); FUNCTIONS IN: ubiquitin-protein ligase activity, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), U box domain (InterPro:IPR003613), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT1G01940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29394 : 282.0) no description available & (q39613|cyph_catro : 96.7) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 700.0) & (original description: Putative PPIL2, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf00883_1653271-1666763' '(at4g34960 : 235.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: Golgi apparatus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: cyclophilin 5 (TAIR:AT2G29960.1); Has 16085 Blast hits to 16059 proteins in 2650 species: Archae - 108; Bacteria - 6649; Metazoa - 2891; Fungi - 1367; Plants - 1258; Viruses - 4; Other Eukaryotes - 3808 (source: NCBI BLink). & (gnl|cdd|29397 : 191.0) no description available & (gnl|cdd|36098 : 188.0) no description available & (q39613|cyph_catro : 156.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 470.0) & (original description: Putative cyp, Description = PPIase, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf00991_290578-299061' '(at5g67530 : 874.0) plant U-box 49 (PUB49); FUNCTIONS IN: ubiquitin-protein ligase activity, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), U box domain (InterPro:IPR003613), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT1G01940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36101 : 655.0) no description available & (gnl|cdd|29394 : 284.0) no description available & (q39613|cyph_catro : 112.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 1748.0) & (original description: Putative CYP65, Description = Peptidyl-prolyl cis-trans isomerase CYP65, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf01694_520465-528890' '(at5g58710 : 304.0) Encodes cyclophilin ROC7.; rotamase CYP 7 (ROC7); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, root development; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: cyclophilin 5 (TAIR:AT2G29960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29397 : 292.0) no description available & (gnl|cdd|36098 : 260.0) no description available & (q39613|cyph_catro : 223.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 608.0) & (original description: Putative cyc, Description = PPIase, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf01847_327640-330155' '(gnl|cdd|29397 : 295.0) no description available & (o49886|cyph_luplu : 265.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Lupinus luteus (European yellow lupin) & (gnl|cdd|36083 : 259.0) no description available & (at2g21130 : 255.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: rotamase CYP 1 (TAIR:AT4G38740.1); Has 16606 Blast hits to 16571 proteins in 2692 species: Archae - 108; Bacteria - 6886; Metazoa - 2917; Fungi - 1384; Plants - 1286; Viruses - 4; Other Eukaryotes - 4021 (source: NCBI BLink). & (reliability: 510.0) & (original description: Putative CYP, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf01852_198858-201373' '(gnl|cdd|29397 : 294.0) no description available & (q39613|cyph_catro : 275.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (gnl|cdd|35766 : 265.0) no description available & (at2g16600 : 259.0) Encodes cytosolic cyclophilin ROC3.; rotamase CYP 3 (ROC3); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, signal transduction; LOCATED IN: cytosol, chloroplast, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT2G21130.1); Has 12245 Blast hits to 12232 proteins in 1905 species: Archae - 88; Bacteria - 3660; Metazoa - 2934; Fungi - 1299; Plants - 1235; Viruses - 4; Other Eukaryotes - 3025 (source: NCBI BLink). & (reliability: 518.0) & (original description: Putative cyp1, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf02362_44842-50255' '(at5g58710 : 258.0) Encodes cyclophilin ROC7.; rotamase CYP 7 (ROC7); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, root development; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: cyclophilin 5 (TAIR:AT2G29960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29397 : 247.0) no description available & (gnl|cdd|35766 : 217.0) no description available & (o49886|cyph_luplu : 189.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Lupinus luteus (European yellow lupin) & (reliability: 516.0) & (original description: Putative cyp1, Description = PPIase, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf02502_612467-619394' '(at3g66654 : 193.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT2G47320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36100 : 135.0) no description available & (gnl|cdd|29390 : 92.6) no description available & (reliability: 386.0) & (original description: Putative CYP21-4, Description = Peptidyl-prolyl cis-trans isomerase CYP21-4, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf02756_29668-35756' '(at3g25230 : 737.0) Encodes a a high molecular weight member of the FK506 binding protein (FKBP) family. It has three FKBP12-like domains, tetratricopeptide repeats, and a putative calmodulin binding domain. Modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs.; rotamase FKBP 1 (ROF1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-type peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT5G48570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43207|fkb70_wheat : 689.0) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) & (gnl|cdd|35763 : 295.0) no description available & (gnl|cdd|84647 : 139.0) no description available & (reliability: 1474.0) & (original description: Putative FKBP62, Description = Peptidyl-prolyl cis-trans isomerase FKBP62, PFAM = PF00254;PF00254;PF00254;PF00515)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf02864_844527-851608' '(q94g00|pin1_maldo : 184.0) Peptidyl-prolyl cis-trans isomerase 1 (EC 5.2.1.8) (Rotamase Pin1) (PPIase Pin1) (MdPin1) - Malus domestica (Apple) (Malus sylvestris) & (at2g18040 : 173.0) phosphorylation-specific peptidyl prolyl cis/trans isomerase (PPIase) with specificity for phosphoserine-proline bonds; "peptidylprolyl cis/trans isomerase, NIMA-interacting 1" (PIN1AT); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, PpiC-type (InterPro:IPR000297); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT1G26550.1); Has 6394 Blast hits to 6305 proteins in 1691 species: Archae - 14; Bacteria - 4880; Metazoa - 261; Fungi - 147; Plants - 126; Viruses - 0; Other Eukaryotes - 966 (source: NCBI BLink). & (gnl|cdd|38469 : 149.0) no description available & (gnl|cdd|84919 : 95.0) no description available & (reliability: 346.0) & (original description: Putative PIN1, Description = Peptidyl-prolyl cis-trans isomerase Pin1, PFAM = PF00639)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf02912_78428-84432' '(at3g25230 : 741.0) Encodes a a high molecular weight member of the FK506 binding protein (FKBP) family. It has three FKBP12-like domains, tetratricopeptide repeats, and a putative calmodulin binding domain. Modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs.; rotamase FKBP 1 (ROF1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-type peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT5G48570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43207|fkb70_wheat : 717.0) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) & (gnl|cdd|35763 : 304.0) no description available & (gnl|cdd|84647 : 137.0) no description available & (reliability: 1482.0) & (original description: Putative PGSC0003DMG400007177, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00515;PF00254;PF00254;PF00254)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf02944_218923-231124' '(gnl|cdd|29397 : 210.0) no description available & (at4g32420 : 209.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G63400.3). & (gnl|cdd|35766 : 192.0) no description available & (p21569|cyph_maize : 154.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Zea mays (Maize) & (reliability: 418.0) & (original description: Putative slr1251, Description = Peptidyl-prolyl cis-trans isomerase slr1251, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf03080_2386-9148' '(at2g15790 : 521.0) SQN encodes the Arabidopsis homolog of cyclophilin 40 (CyP40). It is specifically required for the vegetative but not the reproductive maturation of the shoot.; SQUINT (SQN); CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G63400.3); Has 20219 Blast hits to 19939 proteins in 2706 species: Archae - 114; Bacteria - 6925; Metazoa - 4764; Fungi - 1760; Plants - 1912; Viruses - 4; Other Eukaryotes - 4740 (source: NCBI BLink). & (gnl|cdd|35766 : 435.0) no description available & (gnl|cdd|29397 : 265.0) no description available & (o49886|cyph_luplu : 196.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Lupinus luteus (European yellow lupin) & (reliability: 1042.0) & (original description: Putative cpr6, Description = Peptidyl-prolyl cis-trans isomerase D, PFAM = PF00515;PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf03300_8422-15567' '(at2g15790 : 490.0) SQN encodes the Arabidopsis homolog of cyclophilin 40 (CyP40). It is specifically required for the vegetative but not the reproductive maturation of the shoot.; SQUINT (SQN); CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G63400.3); Has 20219 Blast hits to 19939 proteins in 2706 species: Archae - 114; Bacteria - 6925; Metazoa - 4764; Fungi - 1760; Plants - 1912; Viruses - 4; Other Eukaryotes - 4740 (source: NCBI BLink). & (gnl|cdd|35766 : 429.0) no description available & (gnl|cdd|29397 : 259.0) no description available & (o49886|cyph_luplu : 192.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Lupinus luteus (European yellow lupin) & (reliability: 980.0) & (original description: Putative cpr6, Description = Peptidyl-prolyl cis-trans isomerase D, PFAM = PF00160;PF00515)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf03923_1429695-1436410' '(gnl|cdd|29397 : 289.0) no description available & (gnl|cdd|35766 : 260.0) no description available & (at3g63400 : 240.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, RNA splicing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT2G21130.1). & (p21569|cyph_maize : 201.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Zea mays (Maize) & (reliability: 480.0) & (original description: Putative CYP63, Description = Peptidyl-prolyl cis-trans isomerase CYP63, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf04044_1769564-1775175' '(gnl|cdd|29397 : 282.0) no description available & (at3g55920 : 275.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: cyclophilin 5 (TAIR:AT2G29960.1); Has 16458 Blast hits to 16421 proteins in 2673 species: Archae - 109; Bacteria - 6881; Metazoa - 2905; Fungi - 1389; Plants - 1283; Viruses - 4; Other Eukaryotes - 3887 (source: NCBI BLink). & (gnl|cdd|36098 : 254.0) no description available & (q39613|cyph_catro : 215.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 550.0) & (original description: Putative cyp1, Description = PPIase, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf04098_22907-28890' '(at2g38730 : 331.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT2G21130.1); Has 14613 Blast hits to 14579 proteins in 2550 species: Archae - 106; Bacteria - 5772; Metazoa - 2906; Fungi - 1375; Plants - 1228; Viruses - 4; Other Eukaryotes - 3222 (source: NCBI BLink). & (gnl|cdd|36097 : 306.0) no description available & (gnl|cdd|29397 : 283.0) no description available & (q39613|cyph_catro : 197.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 662.0) & (original description: Putative CYP22, Description = Peptidyl-prolyl cis-trans isomerase CYP22, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf04212_86919-93391' '(at4g34960 : 298.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: Golgi apparatus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: cyclophilin 5 (TAIR:AT2G29960.1); Has 16085 Blast hits to 16059 proteins in 2650 species: Archae - 108; Bacteria - 6649; Metazoa - 2891; Fungi - 1367; Plants - 1258; Viruses - 4; Other Eukaryotes - 3808 (source: NCBI BLink). & (gnl|cdd|29397 : 241.0) no description available & (gnl|cdd|35766 : 232.0) no description available & (q39613|cyph_catro : 194.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 596.0) & (original description: Putative cyp2, Description = PPIase, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf04724_348953-360867' '(at3g15520 : 546.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: cyclophilin 38 (TAIR:AT3G01480.1); Has 713 Blast hits to 711 proteins in 154 species: Archae - 5; Bacteria - 374; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 246 (source: NCBI BLink). & (gnl|cdd|29395 : 160.0) no description available & (o49939|tlp40_spiol : 139.0) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (40 kDa thylakoid lumen PPIase) (40 kDa thylakoid lumen rotamase) - Spinacia oleracea (Spinach) & (reliability: 1092.0) & (original description: Putative CYP, Description = Peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf05158_278733-281981' '(at1g74070 : 295.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: cyclophilin 20-2 (TAIR:AT5G13120.1); Has 3262 Blast hits to 3261 proteins in 458 species: Archae - 0; Bacteria - 134; Metazoa - 1442; Fungi - 557; Plants - 702; Viruses - 0; Other Eukaryotes - 427 (source: NCBI BLink). & (gnl|cdd|36098 : 88.1) no description available & (gnl|cdd|64045 : 88.0) no description available & (reliability: 590.0) & (original description: Putative CYP26-2, Description = Peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf06277_5256-15573' '(at2g15790 : 444.0) SQN encodes the Arabidopsis homolog of cyclophilin 40 (CyP40). It is specifically required for the vegetative but not the reproductive maturation of the shoot.; SQUINT (SQN); CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G63400.3); Has 20219 Blast hits to 19939 proteins in 2706 species: Archae - 114; Bacteria - 6925; Metazoa - 4764; Fungi - 1760; Plants - 1912; Viruses - 4; Other Eukaryotes - 4740 (source: NCBI BLink). & (gnl|cdd|35766 : 414.0) no description available & (gnl|cdd|29397 : 258.0) no description available & (q39613|cyph_catro : 193.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 888.0) & (original description: Putative CYP40, Description = Peptidyl-prolyl cis-trans isomerase CYP40, PFAM = PF00160;PF00515)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf06513_57438-62896' '(at5g35100 : 284.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, peptidyl-cysteine S-nitrosylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: cyclophilin 5 (TAIR:AT2G29960.2); Has 4084 Blast hits to 4084 proteins in 692 species: Archae - 13; Bacteria - 526; Metazoa - 1613; Fungi - 701; Plants - 735; Viruses - 0; Other Eukaryotes - 496 (source: NCBI BLink). & (gnl|cdd|36098 : 96.9) no description available & (gnl|cdd|64045 : 90.3) no description available & (reliability: 568.0) & (original description: Putative CYP28, Description = Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf06999_90413-100153' '(at3g66654 : 258.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT2G47320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36100 : 176.0) no description available & (gnl|cdd|29390 : 115.0) no description available & (reliability: 516.0) & (original description: Putative CYP21-4, Description = Peptidyl-prolyl cis-trans isomerase CYP21-4, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf07231_214126-217107' '(at1g26550 : 197.0) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: isomerase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, PpiC-type (InterPro:IPR000297); BEST Arabidopsis thaliana protein match is: peptidylprolyl cis/trans isomerase, NIMA-interacting 1 (TAIR:AT2G18040.1); Has 6979 Blast hits to 6709 proteins in 1619 species: Archae - 14; Bacteria - 5328; Metazoa - 276; Fungi - 185; Plants - 213; Viruses - 0; Other Eukaryotes - 963 (source: NCBI BLink). & (gnl|cdd|38468 : 125.0) no description available & (reliability: 394.0) & (original description: Putative PIN4, Description = Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4, PFAM = PF00639)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf07428_158856-164904' '(at3g25230 : 722.0) Encodes a a high molecular weight member of the FK506 binding protein (FKBP) family. It has three FKBP12-like domains, tetratricopeptide repeats, and a putative calmodulin binding domain. Modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs.; rotamase FKBP 1 (ROF1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-type peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT5G48570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43207|fkb70_wheat : 690.0) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) & (gnl|cdd|35763 : 304.0) no description available & (gnl|cdd|84647 : 131.0) no description available & (reliability: 1444.0) & (original description: Putative FKBP62, Description = Peptidyl-prolyl cis-trans isomerase FKBP62, PFAM = PF00515;PF00254;PF00254;PF00254)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf07850_515716-521165' '(gnl|cdd|36099 : 271.0) no description available & (at2g36130 : 254.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: cyclophilin71 (TAIR:AT3G44600.1); Has 17839 Blast hits to 17712 proteins in 2717 species: Archae - 108; Bacteria - 7579; Metazoa - 2864; Fungi - 1418; Plants - 1272; Viruses - 0; Other Eukaryotes - 4598 (source: NCBI BLink). & (gnl|cdd|29393 : 232.0) no description available & (q39613|cyph_catro : 109.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 508.0) & (original description: Putative cyp3, Description = Peptidyl-prolyl cis-trans isomerase-like 1, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf08447_94036-106032' '(at3g25220 : 202.0) immunophilin (FKBP15-1); FK506-binding protein 15 kD-1 (FKBP15-1); FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FK506- and rapamycin-binding protein 15 kD-2 (TAIR:AT5G48580.1); Has 11255 Blast hits to 10633 proteins in 1849 species: Archae - 158; Bacteria - 6135; Metazoa - 1894; Fungi - 499; Plants - 818; Viruses - 0; Other Eukaryotes - 1751 (source: NCBI BLink). & (q41649|fkb15_vicfa : 198.0) FK506-binding protein 2 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (15 kDa FKBP) (FKBP-15) - Vicia faba (Broad bean) & (gnl|cdd|35769 : 191.0) no description available & (gnl|cdd|84647 : 131.0) no description available & (reliability: 404.0) & (original description: Putative fpr3, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00254)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf10919_218875-224185' '(q94g00|pin1_maldo : 187.0) Peptidyl-prolyl cis-trans isomerase 1 (EC 5.2.1.8) (Rotamase Pin1) (PPIase Pin1) (MdPin1) - Malus domestica (Apple) (Malus sylvestris) & (at2g18040 : 171.0) phosphorylation-specific peptidyl prolyl cis/trans isomerase (PPIase) with specificity for phosphoserine-proline bonds; "peptidylprolyl cis/trans isomerase, NIMA-interacting 1" (PIN1AT); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, PpiC-type (InterPro:IPR000297); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT1G26550.1); Has 6394 Blast hits to 6305 proteins in 1691 species: Archae - 14; Bacteria - 4880; Metazoa - 261; Fungi - 147; Plants - 126; Viruses - 0; Other Eukaryotes - 966 (source: NCBI BLink). & (gnl|cdd|38469 : 154.0) no description available & (gnl|cdd|84919 : 98.1) no description available & (reliability: 342.0) & (original description: Putative PIN1, Description = Peptidyl-prolyl cis-trans isomerase Pin1, PFAM = PF00639)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf11438_5539-25410' '(at4g33060 : 489.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: cyclophilin71 (TAIR:AT3G44600.1); Has 24116 Blast hits to 22276 proteins in 2786 species: Archae - 119; Bacteria - 7703; Metazoa - 5717; Fungi - 2149; Plants - 1502; Viruses - 35; Other Eukaryotes - 6891 (source: NCBI BLink). & (gnl|cdd|36103 : 330.0) no description available & (gnl|cdd|29396 : 299.0) no description available & (reliability: 978.0) & (original description: Putative CYP57, Description = Peptidyl-prolyl cis-trans isomerase CYP57, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf14516_13447-28910' '(at3g15520 : 552.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: cyclophilin 38 (TAIR:AT3G01480.1); Has 713 Blast hits to 711 proteins in 154 species: Archae - 5; Bacteria - 374; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 246 (source: NCBI BLink). & (gnl|cdd|29395 : 162.0) no description available & (o49939|tlp40_spiol : 142.0) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (40 kDa thylakoid lumen PPIase) (40 kDa thylakoid lumen rotamase) - Spinacia oleracea (Spinach) & (reliability: 1104.0) & (original description: Putative CYN37, Description = Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, PFAM = PF00160)' T '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'niben101scf16915_36262-42935' '(gnl|cdd|29397 : 288.0) no description available & (gnl|cdd|35766 : 256.0) no description available & (at3g63400 : 237.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, RNA splicing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT2G21130.1). & (p21569|cyph_maize : 204.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Zea mays (Maize) & (reliability: 474.0) & (original description: Putative PCKR1, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = PF00160)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold867_4445-8436' '(at5g13150 : 553.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein C1 (EXO70C1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein C2 (TAIR:AT5G13990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37555 : 465.0) no description available & (gnl|cdd|86233 : 348.0) no description available & (reliability: 1040.0) & (original description: Putative BnaA03g04210D, Description = BnaA03g04210D protein, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold2657_5273-9436' '(at5g46860 : 169.0) Syntaxin-related protein required for vacuolar assembly. A member of t-SNARE superfamily, homologous to yest Vam3p. Localized in the vacuolar membranes. The protein has a heptad repeat structure (residues164ñ220) in which hydrophobic amino acid residues appear at seven amino acid intervals. Such regions have a high potential to form an amphiphilic a-helix, intriguing for the intermolecular interactions by forming coiled-coil structure. AtVam3p has a highly hydrophobic segment at its C terminus thus implicating it to be a membrane protein while the rest of the sequence is hydrophilic.; VACUOLAR MORPHOLOGY 3 (VAM3); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: in 7 processes; LOCATED IN: late endosome, trans-Golgi network transport vesicle, plant-type vacuole membrane, vacuole, plant-type vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 23 (TAIR:AT4G17730.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36029 : 145.0) no description available & (reliability: 338.0) & (original description: Putative SYP22, Description = Syntaxin-22, PFAM = PF05739;PF14523)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold2672_20856-42230' '(at1g50500 : 1145.0) encodes a member of VPS53 family protein involved in the retrograde trafficking of vesicles to the late Golgi. Mutants in this gene are more sensitive to heat and osmotic stress.; HEAT-INTOLERANT 1 (HIT1); CONTAINS InterPro DOMAIN/s: Vps53-like, N-terminal (InterPro:IPR007234); BEST Arabidopsis thaliana protein match is: Membrane trafficking VPS53 family protein (TAIR:AT1G50970.1). & (gnl|cdd|37391 : 627.0) no description available & (gnl|cdd|67706 : 354.0) no description available & (reliability: 2290.0) & (original description: Putative VPS53, Description = Vacuolar protein sorting-associated protein 53 A, PFAM = PF04100)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold2747_13563-22614' '(at4g17890 : 402.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ARF-GAP domain 8 (AGD8); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 9 (TAIR:AT5G46750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35925 : 340.0) no description available & (gnl|cdd|85433 : 141.0) no description available & (reliability: 754.0) & (original description: Putative AGD8, Description = Probable ADP-ribosylation factor GTPase-activating protein AGD8, PFAM = PF01412)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold3236_62880-68019' '(at3g08530 : 491.0) Clathrin, heavy chain; FUNCTIONS IN: structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane, chloroplast, membrane; EXPRESSED IN: guard cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Clathrin, heavy chain (InterPro:IPR016341), Clathrin, heavy chain, linker/propeller domain (InterPro:IPR016025), Tetratricopeptide-like helical (InterPro:IPR011990), Clathrin, heavy chain, propeller, N-terminal (InterPro:IPR001473), Clathrin, heavy chain, linker, core motif (InterPro:IPR015348), Clathrin, heavy chain, propeller repeat (InterPro:IPR022365), Armadillo-type fold (InterPro:IPR016024), Clathrin, heavy chain/VPS, 7-fold repeat (InterPro:IPR000547); BEST Arabidopsis thaliana protein match is: Clathrin, heavy chain (TAIR:AT3G11130.1); Has 1511 Blast hits to 1401 proteins in 489 species: Archae - 2; Bacteria - 31; Metazoa - 879; Fungi - 167; Plants - 128; Viruses - 0; Other Eukaryotes - 304 (source: NCBI BLink). & (gnl|cdd|36203 : 469.0) no description available & (gnl|cdd|47627 : 97.6) no description available & (reliability: 982.0) & (original description: Putative CHC2, Description = Clathrin heavy chain 2, PFAM = PF00637;PF00637)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold3774_63776-70617' '(at1g79590 : 285.0) Encodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed.; syntaxin of plants 52 (SYP52); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: vesicle-mediated transport; LOCATED IN: endosome membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), Syntaxin/epimorphin, conserved site (InterPro:IPR006012); BEST Arabidopsis thaliana protein match is: syntaxin of plants 51 (TAIR:AT1G16240.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38412 : 181.0) no description available & (reliability: 570.0) & (original description: Putative SYP51, Description = Syntaxin-51, PFAM = )' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold5103_1-6631' '(at2g38410 : 364.0) ENTH/VHS/GAT family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), GAT (InterPro:IPR004152), VHS subgroup (InterPro:IPR018205), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS/GAT family protein (TAIR:AT5G01760.1); Has 42231 Blast hits to 23362 proteins in 1216 species: Archae - 12; Bacteria - 2643; Metazoa - 15006; Fungi - 7319; Plants - 4169; Viruses - 367; Other Eukaryotes - 12715 (source: NCBI BLink). & (gnl|cdd|36303 : 294.0) no description available & (gnl|cdd|48658 : 165.0) no description available & (reliability: 728.0) & (original description: Putative BnaC04g53430D, Description = BnaC04g53430D protein, PFAM = PF00790;PF03127)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold5402_11458-13574' '(at2g18260 : 332.0) member of SYP11 Gene Family; syntaxin of plants 112 (SYP112); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: intracellular protein transport, response to cold, cellular membrane fusion; LOCATED IN: nucleus; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 111 (TAIR:AT1G08560.1); Has 1733 Blast hits to 1731 proteins in 229 species: Archae - 0; Bacteria - 19; Metazoa - 889; Fungi - 210; Plants - 409; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|36028 : 183.0) no description available & (gnl|cdd|29141 : 98.8) no description available & (reliability: 664.0) & (original description: Putative SYP112, Description = Syntaxin-112, PFAM = PF00804;PF05739)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold7526_11090-17478' '(at4g34660 : 372.0) SH3 domain-containing protein; FUNCTIONS IN: clathrin binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Src homology-3 domain (InterPro:IPR001452); BEST Arabidopsis thaliana protein match is: SH3 domain-containing protein (TAIR:AT4G18060.1). & (reliability: 744.0) & (original description: Putative SH3P2, Description = SH3 domain-containing protein 2, PFAM = PF14604)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold8859_16540-40394' '(at1g60070 : 1259.0) Adaptor protein complex AP-1, gamma subunit; FUNCTIONS IN: protein transporter activity, clathrin binding, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, Golgi apparatus part, Golgi apparatus, clathrin adaptor complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adaptor protein complex AP-1, gamma subunit (InterPro:IPR017107), Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Armadillo-like helical (InterPro:IPR011989), Clathrin adaptor, gamma-adaptin, appendage (InterPro:IPR008153), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: gamma-adaptin 1 (TAIR:AT1G23900.2). & (gnl|cdd|36280 : 1052.0) no description available & (gnl|cdd|85562 : 428.0) no description available & (reliability: 2518.0) & (original description: Putative aptC, Description = AP-1 complex subunit gamma-1, PFAM = PF02883;PF01602)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold8916_11289-19341' '(at1g15880 : 299.0) Golgi SNARE 11 protein (GOS11); golgi snare 11 (GOS11); BEST Arabidopsis thaliana protein match is: golgi snare 12 (TAIR:AT2G45200.1); Has 412 Blast hits to 412 proteins in 171 species: Archae - 0; Bacteria - 0; Metazoa - 161; Fungi - 123; Plants - 99; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|38418 : 191.0) no description available & (gnl|cdd|68577 : 95.8) no description available & (reliability: 598.0) & (original description: Putative GOS11, Description = Golgi SNAP receptor complex member 1-1, PFAM = PF12352;PF10548)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold9996_67571-76356' '(at5g09260 : 166.0) vacuolar protein sorting-associated protein 20.2 (VPS20.2); INVOLVED IN: vesicle-mediated transport, N-terminal protein myristoylation; LOCATED IN: ESCRT III complex, plasma membrane; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT5G63880.1); Has 1828 Blast hits to 1807 proteins in 295 species: Archae - 35; Bacteria - 99; Metazoa - 731; Fungi - 367; Plants - 251; Viruses - 5; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|38121 : 160.0) no description available & (reliability: 332.0) & (original description: Putative CHMP6, Description = Vacuolar sorting-associated-like protein, PFAM = PF03357)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold15873_1456-13883' '(at3g03800 : 317.0) member of SYP13 Gene Family; syntaxin of plants 131 (SYP131); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: intracellular protein transport, cellular membrane fusion; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 132 (TAIR:AT5G08080.1); Has 2798 Blast hits to 2798 proteins in 353 species: Archae - 4; Bacteria - 78; Metazoa - 1293; Fungi - 501; Plants - 492; Viruses - 0; Other Eukaryotes - 430 (source: NCBI BLink). & (gnl|cdd|36028 : 249.0) no description available & (gnl|cdd|29141 : 105.0) no description available & (reliability: 634.0) & (original description: Putative SYP131, Description = Putative syntaxin-131, PFAM = PF05739;PF00804)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold17614_1992-6965' '(at5g01430 : 122.0) Got1/Sft2-like vescicle transport protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Got1/SFT2-like (InterPro:IPR007305); BEST Arabidopsis thaliana protein match is: Got1/Sft2-like vescicle transport protein family (TAIR:AT3G49420.1). & (gnl|cdd|36954 : 115.0) no description available & (gnl|cdd|67778 : 97.2) no description available & (reliability: 244.0) & (original description: Putative GOT1A, Description = Vesicle transport protein GOT1A, PFAM = PF04178)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold18197_28058-35225' '(at1g08820 : 195.0) Encodes VAP33-like protein that interacts with cowpea mosaic virus protein 60K. Is a SNARE-like protein that may be involved in vesicular transport to or from the ER.; vamp/synaptobrevin-associated protein 27-2 (VAP27-2); FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular transport; LOCATED IN: plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535); BEST Arabidopsis thaliana protein match is: vesicle associated protein (TAIR:AT3G60600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35660 : 101.0) no description available & (gnl|cdd|84916 : 90.4) no description available & (reliability: 390.0) & (original description: Putative PVA22, Description = Vesicle-associated protein 2-2, PFAM = PF00635)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold19118_7505-15602' '(at1g64350 : 400.0) seh1-like protein; SEH1H; FUNCTIONS IN: nucleotide binding; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT2G30050.1); Has 1315 Blast hits to 1213 proteins in 251 species: Archae - 0; Bacteria - 230; Metazoa - 335; Fungi - 407; Plants - 224; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (gnl|cdd|37656 : 281.0) no description available & (reliability: 800.0) & (original description: Putative SEH1, Description = Protein SEH1, PFAM = PF00400)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold20280_19887-24937' '(at2g32670 : 360.0) member of Synaptobrevin -like protein family; vesicle-associated membrane protein 725 (VAMP725); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: endosome, plasma membrane, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 726 (TAIR:AT1G04760.1); Has 2451 Blast hits to 2449 proteins in 264 species: Archae - 0; Bacteria - 0; Metazoa - 984; Fungi - 445; Plants - 609; Viruses - 0; Other Eukaryotes - 413 (source: NCBI BLink). & (gnl|cdd|36077 : 344.0) no description available & (gnl|cdd|85150 : 102.0) no description available & (reliability: 720.0) & (original description: Putative VAMP726, Description = Putative vesicle-associated membrane protein 726, PFAM = PF13774;PF00957)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold21974_6982-22615' '(at1g71270 : 1070.0) Encodes a homolog of the yeast Vps52p/SAC2. Involved in pollen tube germination and growth. Located in multiple endomembrane organelles including the golgi. The yeast protein has been shown to be located at the late Golgi and to function in a complex involved in retrograde trafficking of vesicles between the early endosomal compartment and the trans-Golgi network.; POKY POLLEN TUBE (POK); CONTAINS InterPro DOMAIN/s: Vps52/Sac2 (InterPro:IPR007258); BEST Arabidopsis thaliana protein match is: Vps52 / Sac2 family (TAIR:AT1G71300.1); Has 820 Blast hits to 773 proteins in 240 species: Archae - 10; Bacteria - 70; Metazoa - 261; Fungi - 156; Plants - 82; Viruses - 2; Other Eukaryotes - 239 (source: NCBI BLink). & (gnl|cdd|37172 : 769.0) no description available & (gnl|cdd|67733 : 551.0) no description available & (reliability: 2140.0) & (original description: Putative VPS52, Description = Vacuolar protein sorting-associated protein 52 A, PFAM = PF04129)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold22005_4401-25649' '(at1g79830 : 619.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC5 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (139 aa) portion of the protein. The C-terminal portion of the protein can also specifically interact with two members of the Rab family of GTPases (RabH1b and RabH1c).; golgin candidate 5 (GC5); FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TATA element modulatory factor 1 DNA binding (InterPro:IPR022092), TATA element modulatory factor 1 TATA binding (InterPro:IPR022091). & (gnl|cdd|39872 : 391.0) no description available & (reliability: 1238.0) & (original description: Putative GC5, Description = Golgin candidate 5, PFAM = PF12325;PF12329)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold22095_1444-11757' '(at3g24350 : 277.0) member of Glycoside Hydrolase Family 17; syntaxin of plants 32 (SYP32); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: intracellular protein transport, cellular membrane fusion; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), t-SNARE (InterPro:IPR010989), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 31 (TAIR:AT5G05760.1). & (gnl|cdd|36030 : 257.0) no description available & (reliability: 554.0) & (original description: Putative SYP32, Description = Syntaxin-32, PFAM = PF11416;PF05739)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold23112_11828-17819' '(gnl|cdd|66892 : 248.0) no description available & (gnl|cdd|36901 : 247.0) no description available & (at4g39220 : 233.0) Key player of retrieval of ER membrane proteins; ATRER1A; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: endoplasmatic reticulum retrieval protein 1B (TAIR:AT2G21600.1); Has 516 Blast hits to 513 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 155; Fungi - 150; Plants - 130; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative RER1B, Description = Protein RER1B, PFAM = PF03248)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold23296_311-7117' '(at3g54300 : 422.0) Encodes a member of Synaptobrevin -like protein family. VAMP727 is a R-SNARE and interacts with SYP22/VTI11/SYP51. It is required for trafficking of storage proteins to the protein storage vacuoles (PSV) and also for PSV organization and biogenesis. Loss of function mutations have no phenotype but double mutants with SYP22 are embryo lethal.; vesicle-associated membrane protein 727 (VAMP727); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vacuole organization, protein targeting to vacuole; LOCATED IN: endosome, SNARE complex, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 726 (TAIR:AT1G04760.1); Has 2397 Blast hits to 2395 proteins in 262 species: Archae - 0; Bacteria - 0; Metazoa - 970; Fungi - 430; Plants - 618; Viruses - 0; Other Eukaryotes - 379 (source: NCBI BLink). & (gnl|cdd|36077 : 324.0) no description available & (gnl|cdd|85150 : 109.0) no description available & (reliability: 844.0) & (original description: Putative VAMP727, Description = Vesicle-associated membrane protein 727, PFAM = PF13774;PF00957)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold25049_1433-12398' '(at1g79990 : 1488.0) structural molecules; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Coatomer, beta' subunit (InterPro:IPR016453), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, beta' subunit (TAIR:AT1G52360.1); Has 74269 Blast hits to 32109 proteins in 811 species: Archae - 56; Bacteria - 8450; Metazoa - 29737; Fungi - 16170; Plants - 9747; Viruses - 0; Other Eukaryotes - 10109 (source: NCBI BLink). & (gnl|cdd|35497 : 1240.0) no description available & (gnl|cdd|67661 : 536.0) no description available & (p93107|pf20_chlre : 93.2) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 2976.0) & (original description: Putative copB2, Description = Coatomer subunit beta, PFAM = PF00400;PF00400;PF00400;PF00400;PF04053)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold26645_22743-27566' '(at1g30630 : 473.0) Coatomer epsilon subunit; FUNCTIONS IN: protein transporter activity, structural molecule activity, binding; INVOLVED IN: retrograde vesicle-mediated transport, Golgi to ER; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Coatomer, epsilon subunit (InterPro:IPR006822); BEST Arabidopsis thaliana protein match is: Coatomer epsilon subunit (TAIR:AT2G34840.1); Has 442 Blast hits to 442 proteins in 180 species: Archae - 6; Bacteria - 14; Metazoa - 175; Fungi - 90; Plants - 92; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|68311 : 409.0) no description available & (gnl|cdd|38291 : 346.0) no description available & (reliability: 946.0) & (original description: Putative cop2, Description = Coatomer subunit epsilon, PFAM = PF04733)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold27092_1-14649' '(at1g21380 : 296.0) Target of Myb protein 1; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), Target of Myb protein 1 (InterPro:IPR014645), GAT (InterPro:IPR004152), VHS subgroup (InterPro:IPR018205), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: Target of Myb protein 1 (TAIR:AT1G76970.1); Has 1707 Blast hits to 1699 proteins in 198 species: Archae - 0; Bacteria - 6; Metazoa - 892; Fungi - 452; Plants - 279; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (gnl|cdd|36303 : 216.0) no description available & (gnl|cdd|66780 : 91.8) no description available & (reliability: 592.0) & (original description: Putative TaSAG2, Description = ENTH/VHS/GAT family protein, PFAM = PF00790;PF03127)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold28436_12106-17148' '(gnl|cdd|36901 : 245.0) no description available & (gnl|cdd|66892 : 245.0) no description available & (at4g39220 : 214.0) Key player of retrieval of ER membrane proteins; ATRER1A; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: endoplasmatic reticulum retrieval protein 1B (TAIR:AT2G21600.1); Has 516 Blast hits to 513 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 155; Fungi - 150; Plants - 130; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative RER1A, Description = Protein RER1A, PFAM = PF03248)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold39594_12796-19616' '(at3g05000 : 297.0) Transport protein particle (TRAPP) component; CONTAINS InterPro DOMAIN/s: Transport protein particle (TRAPP) component (InterPro:IPR007194); Has 457 Blast hits to 457 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 198; Fungi - 137; Plants - 66; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|38526 : 207.0) no description available & (gnl|cdd|86520 : 148.0) no description available & (reliability: 594.0) & (original description: Putative TRS33, Description = Component of TRAPP complex, PFAM = PF04051)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold40516_6070-10175' '(at5g13990 : 554.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein C2 (EXO70C2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, exocyst; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein C1 (TAIR:AT5G13150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37555 : 464.0) no description available & (gnl|cdd|86233 : 352.0) no description available & (reliability: 1108.0) & (original description: Putative EXO70C2, Description = Exocyst subunit exo70 family protein C2, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold40528_11742-18959' '(at3g05000 : 226.0) Transport protein particle (TRAPP) component; CONTAINS InterPro DOMAIN/s: Transport protein particle (TRAPP) component (InterPro:IPR007194); Has 457 Blast hits to 457 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 198; Fungi - 137; Plants - 66; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|38526 : 174.0) no description available & (gnl|cdd|86520 : 126.0) no description available & (reliability: 452.0) & (original description: Putative Sb06g014440, Description = Putative uncharacterized protein Sb06g014440, PFAM = PF04051)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold41201_11913-17620' '(gnl|cdd|38121 : 184.0) no description available & (at5g09260 : 177.0) vacuolar protein sorting-associated protein 20.2 (VPS20.2); INVOLVED IN: vesicle-mediated transport, N-terminal protein myristoylation; LOCATED IN: ESCRT III complex, plasma membrane; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT5G63880.1); Has 1828 Blast hits to 1807 proteins in 295 species: Archae - 35; Bacteria - 99; Metazoa - 731; Fungi - 367; Plants - 251; Viruses - 5; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|86302 : 99.1) no description available & (reliability: 354.0) & (original description: Putative chmp6, Description = Charged multivesicular body protein 6, PFAM = PF03357)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold46642_8435-27609' '(at5g58440 : 545.0) sorting nexin 2A (SNX2a); FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2B (TAIR:AT5G07120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37484 : 209.0) no description available & (gnl|cdd|85027 : 85.1) no description available & (reliability: 1090.0) & (original description: Putative SNX2B, Description = Sorting nexin 2B, PFAM = PF09325;PF00787)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold47983_1-12714' '(at4g12770 : 265.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G12780.1). & (gnl|cdd|35652 : 189.0) no description available & (gnl|cdd|70008 : 83.6) no description available & (reliability: 530.0) & (original description: Putative AUXI1, Description = Auxilin-related protein 1, PFAM = )' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold52330_5143-9597' '(at1g79990 : 253.0) structural molecules; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Coatomer, beta' subunit (InterPro:IPR016453), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, beta' subunit (TAIR:AT1G52360.1); Has 74269 Blast hits to 32109 proteins in 811 species: Archae - 56; Bacteria - 8450; Metazoa - 29737; Fungi - 16170; Plants - 9747; Viruses - 0; Other Eukaryotes - 10109 (source: NCBI BLink). & (gnl|cdd|39895 : 87.0) no description available & (reliability: 506.0) & (original description: Putative Sb03g026720, Description = Putative uncharacterized protein Sb03g026720, PFAM = PF09801)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold52615_1-8503' '(at4g21450 : 254.0) PapD-like superfamily protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535); BEST Arabidopsis thaliana protein match is: PapD-like superfamily protein (TAIR:AT4G05060.1). & (gnl|cdd|35660 : 83.8) no description available & (reliability: 508.0) & (original description: Putative BnaCnng14560D, Description = BnaCnng14560D protein, PFAM = PF00635)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold56658_1-6601' '(at1g18190 : 192.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC2 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (508ñ668 aa) portion of the protein.; golgin candidate 2 (GC2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: golgin candidate 1 (TAIR:AT2G19950.1); Has 50245 Blast hits to 32562 proteins in 2069 species: Archae - 503; Bacteria - 6561; Metazoa - 24889; Fungi - 4466; Plants - 2316; Viruses - 153; Other Eukaryotes - 11357 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative GC2, Description = Golgin candidate 2, PFAM = )' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold61085_2681-5840' '(at3g09740 : 181.0) syntaxin of plants 71 (SYP71); syntaxin of plants 71 (SYP71); FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, protein targeting to membrane; LOCATED IN: integral to membrane, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), Syntaxin/epimorphin, conserved site (InterPro:IPR006012); BEST Arabidopsis thaliana protein match is: syntaxin of plants 72 (TAIR:AT3G45280.1); Has 541 Blast hits to 539 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 116; Plants - 188; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative SYP71, Description = Syntaxin-71, PFAM = PF05739)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold63922_1-10832' '(at3g27530 : 1020.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC6 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (225 aa) portion of the protein.; golgin candidate 6 (GC6); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, Golgi vesicle transport, vesicle fusion with Golgi apparatus; LOCATED IN: cytosol, Golgi apparatus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uso1/p115 like vesicle tethering protein, C-terminal (InterPro:IPR006955), Armadillo-type fold (InterPro:IPR016024), Uso1/p115 like vesicle tethering protein, head region (InterPro:IPR006953); Has 8674 Blast hits to 6651 proteins in 794 species: Archae - 167; Bacteria - 1154; Metazoa - 4083; Fungi - 784; Plants - 382; Viruses - 31; Other Eukaryotes - 2073 (source: NCBI BLink). & (gnl|cdd|36164 : 279.0) no description available & (gnl|cdd|68444 : 88.1) no description available & (reliability: 2040.0) & (original description: Putative GC6, Description = Golgin candidate 6, PFAM = PF04871;PF04869)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold67491_5537-9907' '(at1g18190 : 229.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC2 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (508ñ668 aa) portion of the protein.; golgin candidate 2 (GC2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: golgin candidate 1 (TAIR:AT2G19950.1); Has 50245 Blast hits to 32562 proteins in 2069 species: Archae - 503; Bacteria - 6561; Metazoa - 24889; Fungi - 4466; Plants - 2316; Viruses - 153; Other Eukaryotes - 11357 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative GC2, Description = Golgin candidate 2, PFAM = PF09787)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold67866_5260-9819' '(at5g50440 : 219.0) member of Membrin Gene Family; membrin 12 (MEMB12); BEST Arabidopsis thaliana protein match is: membrin 11 (TAIR:AT2G36900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38461 : 168.0) no description available & (gnl|cdd|68577 : 95.0) no description available & (reliability: 438.0) & (original description: Putative MEMB11, Description = Membrin-11, PFAM = PF12352)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold75637_1-8034' '(at2g35190 : 313.0) plant-specific SNARE located in cell plate of dividing cells. cofractionates with the cytokinesis-specific syntaxin, KNOLLE, which is required for the formation of the cell plate.; novel plant snare 11 (NPSN11); FUNCTIONS IN: protein transporter activity, SNAP receptor activity; INVOLVED IN: cytokinesis; LOCATED IN: plasma membrane, cell plate; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), Sec20 (InterPro:IPR005606); BEST Arabidopsis thaliana protein match is: novel plant snare 13 (TAIR:AT3G17440.1); Has 871 Blast hits to 814 proteins in 236 species: Archae - 12; Bacteria - 157; Metazoa - 137; Fungi - 78; Plants - 153; Viruses - 0; Other Eukaryotes - 334 (source: NCBI BLink). & (reliability: 626.0) & (original description: Putative NPSN11, Description = Novel plant SNARE 11, PFAM = PF03908)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold87460_1218-5844' '(at1g16240 : 282.0) Encodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed.; syntaxin of plants 51 (SYP51); CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012); BEST Arabidopsis thaliana protein match is: syntaxin of plants 52 (TAIR:AT1G79590.2); Has 550 Blast hits to 550 proteins in 163 species: Archae - 0; Bacteria - 4; Metazoa - 169; Fungi - 163; Plants - 161; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|38412 : 198.0) no description available & (reliability: 564.0) & (original description: Putative Os02g0119400, Description = Os02g0119400 protein, PFAM = PF05739)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold92708_1660-4805' '(at3g11820 : 367.0) Encodes a syntaxin localized at the plasma membrane (SYR1, Syntaxin Related Protein 1, also known as SYP121, PENETRATION1/PEN1). SYR1/PEN1 is a member of the SNARE superfamily proteins. SNARE proteins are involved in cell signaling, vesicle traffic, growth and development. SYR1/PEN1 functions in positioning anchoring of the KAT1 K+ channel protein at the plasma membrane. Transcription is upregulated by abscisic acid, suggesting a role in ABA signaling. Also functions in non-host resistance against barley powdery mildew, Blumeria graminis sp. hordei. SYR1/PEN1 is a nonessential component of the preinvasive resistance against Colletotrichum fungus. Required for mlo resistance.; syntaxin of plants 121 (SYP121); FUNCTIONS IN: protein anchor, SNAP receptor activity; INVOLVED IN: in 13 processes; LOCATED IN: SNARE complex, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 122 (TAIR:AT3G52400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36028 : 264.0) no description available & (gnl|cdd|29141 : 126.0) no description available & (reliability: 734.0) & (original description: Putative SYP124, Description = Syntaxin-124, PFAM = PF00804;PF05739)' T '31.4' 'cell.vesicle transport' 'nbv0.3scaffold95724_1-4594' '(at5g05760 : 214.0) A SNARE protein (ortholog of syntaxin 5), a membrane fusion machine component involved in cytokinesis; syntaxin of plants 31 (SYP31); CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 32 (TAIR:AT3G24350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36030 : 147.0) no description available & (reliability: 428.0) & (original description: Putative SYP31, Description = Putative Syntaxin, PFAM = )' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold48_1331743-1343131' '(at5g05760 : 315.0) A SNARE protein (ortholog of syntaxin 5), a membrane fusion machine component involved in cytokinesis; syntaxin of plants 31 (SYP31); CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 32 (TAIR:AT3G24350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36030 : 267.0) no description available & (reliability: 630.0) & (original description: Putative SYP31, Description = Syntaxin-31, PFAM = PF05739)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold141_840325-850655' '(at5g09260 : 191.0) vacuolar protein sorting-associated protein 20.2 (VPS20.2); INVOLVED IN: vesicle-mediated transport, N-terminal protein myristoylation; LOCATED IN: ESCRT III complex, plasma membrane; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT5G63880.1); Has 1828 Blast hits to 1807 proteins in 295 species: Archae - 35; Bacteria - 99; Metazoa - 731; Fungi - 367; Plants - 251; Viruses - 5; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|38121 : 184.0) no description available & (gnl|cdd|86302 : 100.0) no description available & (reliability: 382.0) & (original description: Putative chmp6, Description = Charged multivesicular body protein 6, PFAM = PF03357)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold171_183280-194417' '(at5g07120 : 581.0) Encodes sorting nexin SNX2b. SNX2b is peripherally associated with membranes. Involved in vesicular trafficking from endosomes to the vacuole.; sorting nexin 2B (SNX2b); FUNCTIONS IN: phospholipid binding; INVOLVED IN: vesicle-mediated transport, intracellular signaling pathway; LOCATED IN: membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2A (TAIR:AT5G58440.1); Has 2399 Blast hits to 2386 proteins in 279 species: Archae - 13; Bacteria - 100; Metazoa - 1366; Fungi - 555; Plants - 146; Viruses - 0; Other Eukaryotes - 219 (source: NCBI BLink). & (gnl|cdd|37484 : 212.0) no description available & (gnl|cdd|72740 : 85.7) no description available & (reliability: 1160.0) & (original description: Putative BnaC09g48300D, Description = BnaC09g48300D protein, PFAM = PF09325;PF00787)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold595_9606-14463' '(gnl|cdd|36901 : 256.0) no description available & (gnl|cdd|66892 : 255.0) no description available & (at2g21600 : 240.0) Key player of retrieval of ER membrane proteins; endoplasmatic reticulum retrieval protein 1B (RER1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: retrograde vesicle-mediated transport, Golgi to ER; LOCATED IN: Golgi apparatus, endoplasmic reticulum, cis-Golgi network; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: Rer1 family protein (TAIR:AT4G39220.1); Has 516 Blast hits to 512 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 154; Fungi - 152; Plants - 129; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 480.0) & (original description: Putative RER1A, Description = Protein RER1A, PFAM = PF03248)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold617_434851-438010' '(gnl|cdd|36901 : 160.0) no description available & (gnl|cdd|66892 : 151.0) no description available & (at2g21600 : 120.0) Key player of retrieval of ER membrane proteins; endoplasmatic reticulum retrieval protein 1B (RER1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: retrograde vesicle-mediated transport, Golgi to ER; LOCATED IN: Golgi apparatus, endoplasmic reticulum, cis-Golgi network; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: Rer1 family protein (TAIR:AT4G39220.1); Has 516 Blast hits to 512 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 154; Fungi - 152; Plants - 129; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative rer, Description = Putative endoplasmatic reticulum retrieval protein, PFAM = PF03248)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold620_513213-526866' '(at1g79990 : 1546.0) structural molecules; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Coatomer, beta' subunit (InterPro:IPR016453), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, beta' subunit (TAIR:AT1G52360.1); Has 74269 Blast hits to 32109 proteins in 811 species: Archae - 56; Bacteria - 8450; Metazoa - 29737; Fungi - 16170; Plants - 9747; Viruses - 0; Other Eukaryotes - 10109 (source: NCBI BLink). & (gnl|cdd|35497 : 1312.0) no description available & (gnl|cdd|67661 : 527.0) no description available & (p93107|pf20_chlre : 90.5) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 3092.0) & (original description: Putative copB2, Description = Coatomer subunit beta, PFAM = PF00400;PF00400;PF00400;PF00400;PF04053)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold731_382900-391911' '(at1g60070 : 508.0) Adaptor protein complex AP-1, gamma subunit; FUNCTIONS IN: protein transporter activity, clathrin binding, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, Golgi apparatus part, Golgi apparatus, clathrin adaptor complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adaptor protein complex AP-1, gamma subunit (InterPro:IPR017107), Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Armadillo-like helical (InterPro:IPR011989), Clathrin adaptor, gamma-adaptin, appendage (InterPro:IPR008153), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: gamma-adaptin 1 (TAIR:AT1G23900.2). & (gnl|cdd|36280 : 473.0) no description available & (gnl|cdd|85562 : 210.0) no description available & (reliability: 1016.0) & (original description: Putative aptC, Description = AP-1 complex subunit gamma-1, PFAM = PF01602)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold771_54919-67157' '(at3g03800 : 249.0) member of SYP13 Gene Family; syntaxin of plants 131 (SYP131); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: intracellular protein transport, cellular membrane fusion; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 132 (TAIR:AT5G08080.1); Has 2798 Blast hits to 2798 proteins in 353 species: Archae - 4; Bacteria - 78; Metazoa - 1293; Fungi - 501; Plants - 492; Viruses - 0; Other Eukaryotes - 430 (source: NCBI BLink). & (gnl|cdd|36028 : 226.0) no description available & (gnl|cdd|29141 : 103.0) no description available & (reliability: 498.0) & (original description: Putative SYP131, Description = Putative syntaxin-131, PFAM = PF00804;PF05739)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold816_193759-215323' '(at1g21380 : 394.0) Target of Myb protein 1; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), Target of Myb protein 1 (InterPro:IPR014645), GAT (InterPro:IPR004152), VHS subgroup (InterPro:IPR018205), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: Target of Myb protein 1 (TAIR:AT1G76970.1); Has 1707 Blast hits to 1699 proteins in 198 species: Archae - 0; Bacteria - 6; Metazoa - 892; Fungi - 452; Plants - 279; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (gnl|cdd|36303 : 302.0) no description available & (gnl|cdd|48658 : 156.0) no description available & (reliability: 788.0) & (original description: Putative BnaC06g37770D, Description = BnaC06g37770D protein, PFAM = PF03127;PF00790)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold944_358547-363512' '(at5g01430 : 137.0) Got1/Sft2-like vescicle transport protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Got1/SFT2-like (InterPro:IPR007305); BEST Arabidopsis thaliana protein match is: Got1/Sft2-like vescicle transport protein family (TAIR:AT3G49420.1). & (gnl|cdd|36954 : 104.0) no description available & (gnl|cdd|67778 : 84.5) no description available & (reliability: 274.0) & (original description: Putative pco097248, Description = Golgi transport 1 protein B, PFAM = PF04178)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold1039_426342-442783' '(at5g12370 : 825.0) exocyst complex component sec10 (SEC10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: exocytosis, vesicle docking; LOCATED IN: plasma membrane, membrane, exocyst; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exocyst complex component Sec10 (InterPro:IPR009976); Has 533 Blast hits to 489 proteins in 174 species: Archae - 0; Bacteria - 6; Metazoa - 178; Fungi - 253; Plants - 59; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (q2qv94|exoc5_orysa : 763.0) Exocyst complex component 5 (Exocyst complex component Sec10) - Oryza sativa (Rice) & (gnl|cdd|70844 : 499.0) no description available & (gnl|cdd|38949 : 166.0) no description available & (reliability: 1650.0) & (original description: Putative SEC10, Description = Exocyst complex component 5, PFAM = PF07393;PF07393)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold1039_427622-430294' '(at5g12370 : 154.0) exocyst complex component sec10 (SEC10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: exocytosis, vesicle docking; LOCATED IN: plasma membrane, membrane, exocyst; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exocyst complex component Sec10 (InterPro:IPR009976); Has 533 Blast hits to 489 proteins in 174 species: Archae - 0; Bacteria - 6; Metazoa - 178; Fungi - 253; Plants - 59; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (q2qv94|exoc5_orysa : 124.0) Exocyst complex component 5 (Exocyst complex component Sec10) - Oryza sativa (Rice) & (gnl|cdd|70844 : 91.9) no description available & (reliability: 308.0) & (original description: Putative SEC10, Description = Exocyst complex component 5, PFAM = PF07393)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold1111_336999-344889' '(at1g18190 : 251.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC2 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (508ñ668 aa) portion of the protein.; golgin candidate 2 (GC2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: golgin candidate 1 (TAIR:AT2G19950.1); Has 50245 Blast hits to 32562 proteins in 2069 species: Archae - 503; Bacteria - 6561; Metazoa - 24889; Fungi - 4466; Plants - 2316; Viruses - 153; Other Eukaryotes - 11357 (source: NCBI BLink). & (reliability: 502.0) & (original description: Putative Sb06g031010, Description = Putative uncharacterized protein Sb06g031010, PFAM = PF09787)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold1311_67909-105226' '(at5g03540 : 305.0) AtEXO70A1 is a member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into nine clusters on the phylogenetic tree; exocyst subunit exo70 family protein A1 (EXO70A1); CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein A2 (TAIR:AT5G52340.1). & (gnl|cdd|37555 : 195.0) no description available & (gnl|cdd|86233 : 160.0) no description available & (reliability: 610.0) & (original description: Putative EXO70, Description = Exocyst complex component EXO70A1, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold1467_283028-287962' '(at1g60970 : 243.0) SNARE-like superfamily protein; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: clathrin vesicle coat; EXPRESSED IN: leaf whorl, sperm cell, pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT3G09800.1); Has 621 Blast hits to 621 proteins in 219 species: Archae - 0; Bacteria - 0; Metazoa - 227; Fungi - 139; Plants - 149; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|38553 : 207.0) no description available & (gnl|cdd|35100 : 95.1) no description available & (reliability: 472.0) & (original description: Putative copz1, Description = Coatomer subunit zeta-1, PFAM = PF01217)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold1486_101344-112131' '(at1g03060 : 2949.0) Encodes a WD/BEACH domain protein involved in cell morphogenesis.; SPIRRIG (SPI); FUNCTIONS IN: binding; INVOLVED IN: signal transduction, multidimensional cell growth, vacuole organization, trichome morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Beige/BEACH (InterPro:IPR000409), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Beige/BEACH domain ;WD domain, G-beta repeat protein (TAIR:AT4G02660.1); Has 8491 Blast hits to 6383 proteins in 382 species: Archae - 4; Bacteria - 1376; Metazoa - 3669; Fungi - 1335; Plants - 868; Viruses - 0; Other Eukaryotes - 1239 (source: NCBI BLink). & (gnl|cdd|36999 : 1899.0) no description available & (gnl|cdd|85884 : 467.0) no description available & (reliability: 5430.0) & (original description: Putative lvsA, Description = WD repeat and FYVE domain-containing protein 3, PFAM = PF00400;PF14844;PF02138)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold1683_183950-189581' '(at2g36900 : 204.0) member of Membrin Gene Family; membrin 11 (MEMB11); BEST Arabidopsis thaliana protein match is: membrin 12 (TAIR:AT5G50440.1); Has 361 Blast hits to 361 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 72; Plants - 103; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|38461 : 162.0) no description available & (gnl|cdd|68577 : 99.6) no description available & (reliability: 408.0) & (original description: Putative memb1, Description = Bos1/membrin family Qb-SNARE protein, PFAM = PF12352)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold1712_393937-418696' '(at1g79830 : 581.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC5 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (139 aa) portion of the protein. The C-terminal portion of the protein can also specifically interact with two members of the Rab family of GTPases (RabH1b and RabH1c).; golgin candidate 5 (GC5); FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TATA element modulatory factor 1 DNA binding (InterPro:IPR022092), TATA element modulatory factor 1 TATA binding (InterPro:IPR022091). & (gnl|cdd|39872 : 373.0) no description available & (reliability: 1162.0) & (original description: Putative SIP25, Description = SKIP interacting protein 25, PFAM = PF12325;PF12329)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold1782_373866-391350' '(at1g52360 : 1590.0) Coatomer, beta' subunit; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 (InterPro:IPR011048), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Coatomer, beta' subunit (InterPro:IPR016453), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, beta' subunit (TAIR:AT3G15980.3). & (gnl|cdd|35497 : 1333.0) no description available & (gnl|cdd|67661 : 544.0) no description available & (p93107|pf20_chlre : 92.8) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 3180.0) & (original description: Putative copB2, Description = Coatomer subunit beta, PFAM = PF04053;PF00400;PF00400;PF00400;PF00400;PF00400)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold1782_385802-390740' '(at1g52360 : 352.0) Coatomer, beta' subunit; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 (InterPro:IPR011048), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Coatomer, beta' subunit (InterPro:IPR016453), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, beta' subunit (TAIR:AT3G15980.3). & (gnl|cdd|35497 : 222.0) no description available & (gnl|cdd|67661 : 163.0) no description available & (reliability: 704.0) & (original description: Putative copB2, Description = Coatomer subunit beta, PFAM = PF04053)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold1783_575-23555' '(at4g31480 : 1538.0) Coatomer, beta subunit; FUNCTIONS IN: clathrin binding, structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: male gametophyte, guard cell; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Coatomer, beta subunit, C-terminal (InterPro:IPR011710), Armadillo-like helical (InterPro:IPR011989), Coatomer, beta subunit (InterPro:IPR016460), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: Coatomer, beta subunit (TAIR:AT4G31490.1). & (gnl|cdd|36276 : 1200.0) no description available & (gnl|cdd|71159 : 356.0) no description available & (reliability: 3076.0) & (original description: Putative bCOP, Description = Beta-coat protein, PFAM = PF07718;PF01602;PF14806)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold2119_132299-167878' '(at5g22770 : 1617.0) alpha-adaptin (alpha-ADR); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: male gametophyte, pollen tube, leaf; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Adaptor protein complex AP-2, alpha subunit (InterPro:IPR017104), Armadillo-like helical (InterPro:IPR011989), Clathrin adaptor, alpha-adaptin, appendage, Ig-like subdomain (InterPro:IPR013038), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Clathrin adaptor, alpha-adaptin, appendage, C-terminal subdomain (InterPro:IPR003164), Armadillo-type fold (InterPro:IPR016024), Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain (InterPro:IPR015873), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: Adaptor protein complex AP-2, alpha subunit (TAIR:AT5G22780.1); Has 2529 Blast hits to 2470 proteins in 297 species: Archae - 0; Bacteria - 0; Metazoa - 987; Fungi - 687; Plants - 265; Viruses - 0; Other Eukaryotes - 590 (source: NCBI BLink). & (gnl|cdd|36293 : 1140.0) no description available & (gnl|cdd|85562 : 314.0) no description available & (reliability: 3234.0) & (original description: Putative AP2A, Description = Putative AP-2 complex subunit alpha, PFAM = PF02883;PF01602;PF02296)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold2119_138112-150905' '(at5g22780 : 795.0) Adaptor protein complex AP-2, alpha subunit; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Adaptor protein complex AP-2, alpha subunit (InterPro:IPR017104), Armadillo-like helical (InterPro:IPR011989), Clathrin adaptor, alpha-adaptin, appendage, Ig-like subdomain (InterPro:IPR013038), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Clathrin adaptor, alpha-adaptin, appendage, C-terminal subdomain (InterPro:IPR003164), Armadillo-type fold (InterPro:IPR016024), Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain (InterPro:IPR015873), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: alpha-adaptin (TAIR:AT5G22770.2); Has 2538 Blast hits to 2472 proteins in 298 species: Archae - 0; Bacteria - 2; Metazoa - 993; Fungi - 688; Plants - 265; Viruses - 0; Other Eukaryotes - 590 (source: NCBI BLink). & (gnl|cdd|36293 : 605.0) no description available & (gnl|cdd|85562 : 225.0) no description available & (reliability: 1590.0) & (original description: Putative AP2A, Description = AP-2 complex subunit alpha, PFAM = PF01602;PF01602)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold2356_13918-23821' '(at4g11740 : 335.0) Isolated as a suppressor of a dominant mutant in the Ara4 gene that was expressed in yeast ypt1 mutant strains. A novel protein with a small region of similarity to coil-coiled domain of yeast VSP27 protein.; SAY1; INVOLVED IN: vesicle-mediated transport; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012), Ubiquitin interacting motif (InterPro:IPR003903), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G23040.1); Has 5504 Blast hits to 4000 proteins in 512 species: Archae - 3; Bacteria - 644; Metazoa - 2099; Fungi - 780; Plants - 360; Viruses - 48; Other Eukaryotes - 1570 (source: NCBI BLink). & (gnl|cdd|36577 : 143.0) no description available & (reliability: 670.0) & (original description: Putative PUX8, Description = Plant UBX domain-containing protein 8, PFAM = PF00789;PF14555)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold2392_248421-258018' '(at5g38840 : 526.0) SMAD/FHA domain-containing protein ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: SMAD/FHA domain-containing protein (TAIR:AT5G47790.1); Has 18317 Blast hits to 13795 proteins in 1254 species: Archae - 157; Bacteria - 2798; Metazoa - 7417; Fungi - 1475; Plants - 704; Viruses - 54; Other Eukaryotes - 5712 (source: NCBI BLink). & (gnl|cdd|37092 : 316.0) no description available & (gnl|cdd|28942 : 98.6) no description available & (reliability: 1052.0) & (original description: Putative At5g38840, Description = Kanadaptin-like protein, PFAM = PF00498)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold2988_66059-81169' '(at4g12770 : 256.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G12780.1). & (gnl|cdd|35652 : 187.0) no description available & (gnl|cdd|32878 : 81.4) no description available & (reliability: 512.0) & (original description: Putative AUXI1, Description = Auxilin-related protein 1, PFAM = )' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold3444_28332-42141' '(at4g34450 : 1451.0) coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative; FUNCTIONS IN: clathrin binding, structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Coatomer, gamma subunit, appendage, Ig-like subdomain (InterPro:IPR013040), Armadillo-like helical (InterPro:IPR011989), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Coatomer, gamma subunit (InterPro:IPR017106), Coatomer, gamma subunit , appendage (InterPro:IPR014863), Armadillo-type fold (InterPro:IPR016024), Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain (InterPro:IPR015873), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: structural molecules (TAIR:AT2G16200.1); Has 1647 Blast hits to 1638 proteins in 222 species: Archae - 2; Bacteria - 2; Metazoa - 707; Fungi - 446; Plants - 176; Viruses - 0; Other Eukaryotes - 314 (source: NCBI BLink). & (gnl|cdd|36294 : 1163.0) no description available & (gnl|cdd|34837 : 644.0) no description available & (reliability: 2902.0) & (original description: Putative copG, Description = Coatomer subunit gamma, PFAM = PF08752;PF01602;PF16381)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold3736_75105-85744' '(at2g32670 : 353.0) member of Synaptobrevin -like protein family; vesicle-associated membrane protein 725 (VAMP725); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: endosome, plasma membrane, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 726 (TAIR:AT1G04760.1); Has 2451 Blast hits to 2449 proteins in 264 species: Archae - 0; Bacteria - 0; Metazoa - 984; Fungi - 445; Plants - 609; Viruses - 0; Other Eukaryotes - 413 (source: NCBI BLink). & (gnl|cdd|36077 : 331.0) no description available & (gnl|cdd|85150 : 101.0) no description available & (reliability: 706.0) & (original description: Putative VAMP726, Description = Putative vesicle-associated membrane protein 726, PFAM = PF00957;PF13774)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold3881_201376-215167' '(at4g08180 : 1040.0) OSBP(oxysterol binding protein)-related protein 1C (ORP1C); FUNCTIONS IN: phosphoinositide binding, oxysterol binding; INVOLVED IN: steroid metabolic process, signal transduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Oxysterol-binding protein (InterPro:IPR000648), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 1A (TAIR:AT2G31020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36948 : 665.0) no description available & (gnl|cdd|85327 : 227.0) no description available & (reliability: 2080.0) & (original description: Putative ORP1C, Description = Oxysterol-binding protein-related protein 1C, PFAM = PF01237;PF15413)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold4790_87158-116231' '(at3g55480 : 1177.0) protein affected trafficking 2 (PAT2); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, endocytosis, protein transport; LOCATED IN: membrane coat, Golgi apparatus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adaptor protein complex AP-3, beta subunit (InterPro:IPR017108), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: Adaptin family protein (TAIR:AT4G23460.1); Has 2490 Blast hits to 1771 proteins in 223 species: Archae - 0; Bacteria - 20; Metazoa - 1008; Fungi - 721; Plants - 224; Viruses - 0; Other Eukaryotes - 517 (source: NCBI BLink). & (gnl|cdd|36278 : 761.0) no description available & (gnl|cdd|85562 : 221.0) no description available & (reliability: 2354.0) & (original description: Putative PAT2, Description = AP3-complex subunit beta-A, PFAM = PF14796;PF01602)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold5021_5271-9082' '(at1g72470 : 780.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein D1 (EXO70D1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein D2 (TAIR:AT1G54090.1); Has 916 Blast hits to 905 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 142; Fungi - 103; Plants - 652; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|37555 : 541.0) no description available & (gnl|cdd|86233 : 482.0) no description available & (reliability: 1560.0) & (original description: Putative EXO70D3, Description = Exocyst subunit exo70 family protein D3, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold5650_114767-119180' '(at3g29400 : 558.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein E1 (EXO70E1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein E2 (TAIR:AT5G61010.2); Has 880 Blast hits to 870 proteins in 128 species: Archae - 0; Bacteria - 0; Metazoa - 137; Fungi - 86; Plants - 636; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|37555 : 489.0) no description available & (gnl|cdd|86233 : 356.0) no description available & (reliability: 1116.0) & (original description: Putative EXO70E1, Description = Exocyst subunit exo70 family protein E1, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold5755_100154-121445' '(at4g32760 : 484.0) ENTH/VHS/GAT family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), GAT (InterPro:IPR004152), VHS subgroup (InterPro:IPR018205), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS/GAT family protein (TAIR:AT3G08790.1). & (gnl|cdd|36303 : 333.0) no description available & (gnl|cdd|48658 : 168.0) no description available & (reliability: 968.0) & (original description: Putative At4g32760, Description = ENTH/VHS/GAT family protein, PFAM = PF00790;PF03127)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold5911_82320-123150' '(at1g60070 : 1266.0) Adaptor protein complex AP-1, gamma subunit; FUNCTIONS IN: protein transporter activity, clathrin binding, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, Golgi apparatus part, Golgi apparatus, clathrin adaptor complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adaptor protein complex AP-1, gamma subunit (InterPro:IPR017107), Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Armadillo-like helical (InterPro:IPR011989), Clathrin adaptor, gamma-adaptin, appendage (InterPro:IPR008153), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: gamma-adaptin 1 (TAIR:AT1G23900.2). & (gnl|cdd|36280 : 1041.0) no description available & (gnl|cdd|85562 : 431.0) no description available & (reliability: 2532.0) & (original description: Putative aptC, Description = AP-1 complex subunit gamma-1, PFAM = PF02883;PF01602)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold7650_635-34995' '(at5g22360 : 232.0) Member of Synaptobrevin-like AtVAMP7C, v-SNARE protein family.; vesicle-associated membrane protein 714 (VAMP714); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: Golgi apparatus, vacuole, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 713 (TAIR:AT5G11150.1); Has 2317 Blast hits to 2315 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 867; Fungi - 487; Plants - 553; Viruses - 0; Other Eukaryotes - 410 (source: NCBI BLink). & (gnl|cdd|36077 : 195.0) no description available & (reliability: 464.0) & (original description: Putative LOC100283494, Description = Putative vesicle-associated membrane protein family protein, PFAM = PF13774)' T '31.4' 'cell.vesicle transport' 'nbv0.5scaffold10501_1-7190' '(at3g03800 : 221.0) member of SYP13 Gene Family; syntaxin of plants 131 (SYP131); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: intracellular protein transport, cellular membrane fusion; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 132 (TAIR:AT5G08080.1); Has 2798 Blast hits to 2798 proteins in 353 species: Archae - 4; Bacteria - 78; Metazoa - 1293; Fungi - 501; Plants - 492; Viruses - 0; Other Eukaryotes - 430 (source: NCBI BLink). & (gnl|cdd|36028 : 133.0) no description available & (gnl|cdd|29141 : 99.2) no description available & (reliability: 442.0) & (original description: Putative SYP132, Description = Syntaxin of plants 132, PFAM = PF00804)' T '31.4' 'cell.vesicle transport' 'niben044ctg25903251_1-2196' '(gnl|cdd|35652 : 164.0) no description available & (at4g12780 : 159.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G12770.1). & (reliability: 318.0) & (original description: Putative AUL1, Description = Auxilin-related protein 2, PFAM = )' T '31.4' 'cell.vesicle transport' 'niben044scf00000573ctg009_1-5692' '(at5g58440 : 556.0) sorting nexin 2A (SNX2a); FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2B (TAIR:AT5G07120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37484 : 199.0) no description available & (gnl|cdd|85027 : 85.1) no description available & (reliability: 1112.0) & (original description: Putative SNX2B, Description = Sorting nexin 2B, PFAM = PF00787;PF09325)' T '31.4' 'cell.vesicle transport' 'niben044scf00000963ctg002_1583-5049' '(at1g79990 : 246.0) structural molecules; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Coatomer, beta' subunit (InterPro:IPR016453), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, beta' subunit (TAIR:AT1G52360.1); Has 74269 Blast hits to 32109 proteins in 811 species: Archae - 56; Bacteria - 8450; Metazoa - 29737; Fungi - 16170; Plants - 9747; Viruses - 0; Other Eukaryotes - 10109 (source: NCBI BLink). & (gnl|cdd|39895 : 81.9) no description available & (reliability: 492.0) & (original description: Putative SYS1, Description = Protein SYS1, PFAM = PF09801)' T '31.4' 'cell.vesicle transport' 'niben044scf00001133ctg004_2923-6752' '(at5g01430 : 167.0) Got1/Sft2-like vescicle transport protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Got1/SFT2-like (InterPro:IPR007305); BEST Arabidopsis thaliana protein match is: Got1/Sft2-like vescicle transport protein family (TAIR:AT3G49420.1). & (gnl|cdd|36954 : 123.0) no description available & (gnl|cdd|67778 : 101.0) no description available & (reliability: 334.0) & (original description: Putative Golt1a, Description = Vesicle transport protein GOT1A, PFAM = PF04178)' T '31.4' 'cell.vesicle transport' 'niben044scf00001161ctg025_2150-11340' '(at1g13170 : 1184.0) OSBP(oxysterol binding protein)-related protein 1D (ORP1D); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Pleckstrin homology (InterPro:IPR001849), Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 1C (TAIR:AT4G08180.1). & (gnl|cdd|36948 : 631.0) no description available & (gnl|cdd|85327 : 227.0) no description available & (reliability: 2368.0) & (original description: Putative ORP1D, Description = Oxysterol-binding protein-related protein 1D, PFAM = PF01237;PF15413)' T '31.4' 'cell.vesicle transport' 'niben044scf00001206ctg002_8891-17285' '(at1g08190 : 795.0) Might be involved in protein sorting to the vacuole.; vacuolar protein sorting 41 (VPS41); FUNCTIONS IN: binding, nucleotide binding, zinc ion binding; INVOLVED IN: gravitropism, protein targeting to vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type (InterPro:IPR001841), WD40 repeat (InterPro:IPR001680), Vacuolar protein sorting-associated protein 41 (InterPro:IPR016902), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781), Clathrin, heavy chain/VPS, 7-fold repeat (InterPro:IPR000547); Has 13288 Blast hits to 4251 proteins in 360 species: Archae - 4; Bacteria - 340; Metazoa - 7814; Fungi - 1141; Plants - 584; Viruses - 346; Other Eukaryotes - 3059 (source: NCBI BLink). & (gnl|cdd|37277 : 519.0) no description available & (gnl|cdd|47627 : 98.0) no description available & (reliability: 1590.0) & (original description: Putative VPS41, Description = Vacuolar protein sorting-associated protein 41 homolog, PFAM = PF00637)' T '31.4' 'cell.vesicle transport' 'niben044scf00001785ctg006_1-17772' '(at3g10380 : 1043.0) Subunit of the Putative Arabidopsis Exocyst Complex; subunit of exocyst complex 8 (SEC8); INVOLVED IN: pollen germination, mucilage biosynthetic process involved in seed coat development, pollen tube growth; LOCATED IN: cytosol, plasma membrane, exocyst; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec8 exocyst complex component specific domain (InterPro:IPR007191); Has 454 Blast hits to 346 proteins in 158 species: Archae - 0; Bacteria - 0; Metazoa - 232; Fungi - 133; Plants - 50; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|38895 : 100.0) no description available & (reliability: 2086.0) & (original description: Putative SEC8, Description = Putative exocyst complex component 4, PFAM = PF04048)' T '31.4' 'cell.vesicle transport' 'niben044scf00003427ctg007_5797-14590' '(at1g18190 : 301.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC2 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (508ñ668 aa) portion of the protein.; golgin candidate 2 (GC2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: golgin candidate 1 (TAIR:AT2G19950.1); Has 50245 Blast hits to 32562 proteins in 2069 species: Archae - 503; Bacteria - 6561; Metazoa - 24889; Fungi - 4466; Plants - 2316; Viruses - 153; Other Eukaryotes - 11357 (source: NCBI BLink). & (reliability: 602.0) & (original description: Putative Sb06g031010, Description = Putative uncharacterized protein Sb06g031010, PFAM = PF09787)' T '31.4' 'cell.vesicle transport' 'niben044scf00003743ctg029_1070-9776' '(at4g32760 : 253.0) ENTH/VHS/GAT family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), GAT (InterPro:IPR004152), VHS subgroup (InterPro:IPR018205), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS/GAT family protein (TAIR:AT3G08790.1). & (gnl|cdd|36303 : 135.0) no description available & (gnl|cdd|66780 : 91.8) no description available & (reliability: 506.0) & (original description: Putative TaSAG2, Description = ENTH/VHS/GAT family protein, PFAM = PF03127)' T '31.4' 'cell.vesicle transport' 'niben044scf00003820ctg003_591-16385' '(at3g44340 : 839.0) homologous to yeast and animal Sec24 proteins; expression in yeast cells enhances their survival under oxidative stress conditions.; clone eighty-four (CEF); FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: response to oxidative stress, vesicle-mediated transport; LOCATED IN: COPII vesicle coat, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT4G32640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37195 : 671.0) no description available & (gnl|cdd|34633 : 375.0) no description available & (reliability: 1588.0) & (original description: Putative CEF, Description = Protein transport protein Sec24-like CEF, PFAM = PF04811;PF04810;PF08033)' T '31.4' 'cell.vesicle transport' 'niben044scf00005757ctg018_1-2112' '(gnl|cdd|36028 : 126.0) no description available & (at5g08080 : 117.0) member of SYP13 Gene Family; syntaxin of plants 132 (SYP132); CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 131 (TAIR:AT3G03800.1). & (reliability: 234.0) & (original description: Putative syp1, Description = Syntaxin of plants 122 protein, PFAM = PF05739;PF00804)' T '31.4' 'cell.vesicle transport' 'niben044scf00005792ctg020_1-8577' '(at1g75310 : 189.0) auxin-like 1 protein (AUL1); FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G36520.1); Has 43064 Blast hits to 29150 proteins in 1965 species: Archae - 316; Bacteria - 7312; Metazoa - 16664; Fungi - 4671; Plants - 2417; Viruses - 306; Other Eukaryotes - 11378 (source: NCBI BLink). & (gnl|cdd|35652 : 162.0) no description available & (reliability: 342.0) & (original description: Putative AUL1, Description = Auxilin-related protein 2, PFAM = )' T '31.4' 'cell.vesicle transport' 'niben044scf00006080ctg012_2684-10176' '(at4g21450 : 321.0) PapD-like superfamily protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535); BEST Arabidopsis thaliana protein match is: PapD-like superfamily protein (TAIR:AT4G05060.1). & (gnl|cdd|35660 : 101.0) no description available & (gnl|cdd|84916 : 89.3) no description available & (reliability: 642.0) & (original description: Putative PVA42, Description = Vesicle-associated protein 4-2, PFAM = PF00635)' T '31.4' 'cell.vesicle transport' 'niben044scf00007306ctg012_8178-20422' '(at4g22540 : 1006.0) OSBP(oxysterol binding protein)-related protein 2A (ORP2A); CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 2B (TAIR:AT4G12460.1). & (gnl|cdd|36948 : 609.0) no description available & (gnl|cdd|85327 : 229.0) no description available & (reliability: 2012.0) & (original description: Putative ORP2A, Description = Oxysterol-binding protein-related protein 2A, PFAM = PF15413;PF01237)' T '31.4' 'cell.vesicle transport' 'niben044scf00007572ctg009_2710-6388' '(at4g08180 : 164.0) OSBP(oxysterol binding protein)-related protein 1C (ORP1C); FUNCTIONS IN: phosphoinositide binding, oxysterol binding; INVOLVED IN: steroid metabolic process, signal transduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Oxysterol-binding protein (InterPro:IPR000648), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 1A (TAIR:AT2G31020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36948 : 129.0) no description available & (reliability: 328.0) & (original description: Putative ORP1A, Description = Oxysterol-binding protein-related protein 2A, PFAM = PF01237)' T '31.4' 'cell.vesicle transport' 'niben044scf00007839ctg008_31531-38948' '(at5g16880 : 485.0) Target of Myb protein 1; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), GAT (InterPro:IPR004152), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS/GAT family protein (TAIR:AT1G06210.1); Has 1482 Blast hits to 1482 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 785; Fungi - 378; Plants - 250; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|36303 : 227.0) no description available & (gnl|cdd|48658 : 133.0) no description available & (reliability: 970.0) & (original description: Putative MYB9, Description = MYB transcription factor 9, PFAM = PF03127;PF00790)' T '31.4' 'cell.vesicle transport' 'niben044scf00007972ctg006_2373-10078' '(at1g79830 : 425.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC5 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (139 aa) portion of the protein. The C-terminal portion of the protein can also specifically interact with two members of the Rab family of GTPases (RabH1b and RabH1c).; golgin candidate 5 (GC5); FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TATA element modulatory factor 1 DNA binding (InterPro:IPR022092), TATA element modulatory factor 1 TATA binding (InterPro:IPR022091). & (gnl|cdd|39872 : 279.0) no description available & (reliability: 850.0) & (original description: Putative SIP25, Description = SKIP interacting protein 25, PFAM = PF12325)' T '31.4' 'cell.vesicle transport' 'niben044scf00008121ctg003_75-5452' '(at1g51740 : 227.0) member of SYP8 Gene Family; syntaxin of plants 81 (SYP81); INVOLVED IN: vesicle-mediated transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: t-SNARE (InterPro:IPR010989), SNARE-complex protein Syntaxin-18 N-terminal (InterPro:IPR019529); Has 429 Blast hits to 426 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 200; Fungi - 82; Plants - 110; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|39097 : 156.0) no description available & (reliability: 454.0) & (original description: Putative SYP8, Description = AtSYP81, PFAM = )' T '31.4' 'cell.vesicle transport' 'niben044scf00009478ctg006_1-4388' '(gnl|cdd|36901 : 264.0) no description available & (gnl|cdd|66892 : 262.0) no description available & (at2g21600 : 239.0) Key player of retrieval of ER membrane proteins; endoplasmatic reticulum retrieval protein 1B (RER1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: retrograde vesicle-mediated transport, Golgi to ER; LOCATED IN: Golgi apparatus, endoplasmic reticulum, cis-Golgi network; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: Rer1 family protein (TAIR:AT4G39220.1); Has 516 Blast hits to 512 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 154; Fungi - 152; Plants - 129; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 478.0) & (original description: Putative RER1, Description = Protein RER1, PFAM = PF03248)' T '31.4' 'cell.vesicle transport' 'niben044scf00009813ctg005_650-7549' '(at2g38410 : 360.0) ENTH/VHS/GAT family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), GAT (InterPro:IPR004152), VHS subgroup (InterPro:IPR018205), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS/GAT family protein (TAIR:AT5G01760.1); Has 42231 Blast hits to 23362 proteins in 1216 species: Archae - 12; Bacteria - 2643; Metazoa - 15006; Fungi - 7319; Plants - 4169; Viruses - 367; Other Eukaryotes - 12715 (source: NCBI BLink). & (gnl|cdd|36303 : 291.0) no description available & (gnl|cdd|48658 : 166.0) no description available & (reliability: 720.0) & (original description: Putative BnaC04g53430D, Description = BnaC04g53430D protein, PFAM = PF03127;PF00790)' T '31.4' 'cell.vesicle transport' 'niben044scf00010025ctg000_5769-12211' '(at4g08180 : 647.0) OSBP(oxysterol binding protein)-related protein 1C (ORP1C); FUNCTIONS IN: phosphoinositide binding, oxysterol binding; INVOLVED IN: steroid metabolic process, signal transduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Oxysterol-binding protein (InterPro:IPR000648), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 1A (TAIR:AT2G31020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36948 : 510.0) no description available & (gnl|cdd|85327 : 201.0) no description available & (reliability: 1294.0) & (original description: Putative ORP1B, Description = Oxysterol-binding protein-related protein 1B, PFAM = PF15413;PF01237)' T '31.4' 'cell.vesicle transport' 'niben044scf00010327ctg020_953-4789' '(at3g09800 : 231.0) SNARE-like superfamily protein; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: clathrin vesicle coat; CONTAINS InterPro DOMAIN/s: Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT4G08520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38553 : 206.0) no description available & (gnl|cdd|35100 : 93.9) no description available & (reliability: 448.0) & (original description: Putative COPZ2, Description = Coatomer subunit zeta-2, PFAM = PF01217)' T '31.4' 'cell.vesicle transport' 'niben044scf00010380ctg013_13513-17386' '(at2g39380 : 506.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H2 (EXO70H2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: leaf apex, hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H1 (TAIR:AT3G55150.1); Has 836 Blast hits to 829 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 44; Plants - 635; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|86233 : 492.0) no description available & (gnl|cdd|37555 : 490.0) no description available & (reliability: 980.0) & (original description: Putative EXO70H2, Description = Exocyst subunit exo70 family protein H2, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'niben044scf00011082ctg001_16122-19618' '(at2g21600 : 243.0) Key player of retrieval of ER membrane proteins; endoplasmatic reticulum retrieval protein 1B (RER1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: retrograde vesicle-mediated transport, Golgi to ER; LOCATED IN: Golgi apparatus, endoplasmic reticulum, cis-Golgi network; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: Rer1 family protein (TAIR:AT4G39220.1); Has 516 Blast hits to 512 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 154; Fungi - 152; Plants - 129; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|66892 : 239.0) no description available & (gnl|cdd|36901 : 237.0) no description available & (reliability: 486.0) & (original description: Putative rer1, Description = Retrieval of early ER protein Rer1, PFAM = PF03248)' T '31.4' 'cell.vesicle transport' 'niben044scf00011868ctg008_2318-17389' '(at1g12360 : 842.0) encodes a Sec1 protein and expressed throughout the plant. physically interacts with Syntaxin1 and is required for cytokinesis.; keule (KEU); FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, cytokinesis; LOCATED IN: cytosol, peripheral to membrane of membrane fraction, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: Sec1/munc18-like (SM) proteins superfamily (TAIR:AT4G12120.1); Has 1791 Blast hits to 1770 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 744; Fungi - 510; Plants - 223; Viruses - 0; Other Eukaryotes - 314 (source: NCBI BLink). & (q7xwp3|sec1a_orysa : 756.0) Probable protein transport Sec1a - Oryza sativa (Rice) & (gnl|cdd|36514 : 499.0) no description available & (gnl|cdd|85171 : 220.0) no description available & (reliability: 1684.0) & (original description: Putative KEU, Description = SNARE-interacting protein KEULE, PFAM = PF00995)' T '31.4' 'cell.vesicle transport' 'niben044scf00012606ctg001_2409-6836' '(at1g79990 : 252.0) structural molecules; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Coatomer, beta' subunit (InterPro:IPR016453), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, beta' subunit (TAIR:AT1G52360.1); Has 74269 Blast hits to 32109 proteins in 811 species: Archae - 56; Bacteria - 8450; Metazoa - 29737; Fungi - 16170; Plants - 9747; Viruses - 0; Other Eukaryotes - 10109 (source: NCBI BLink). & (gnl|cdd|39895 : 83.9) no description available & (reliability: 504.0) & (original description: Putative SYS1, Description = Protein SYS1 homolog, PFAM = PF09801)' T '31.4' 'cell.vesicle transport' 'niben044scf00013070ctg021_1376-5326' '(at5g59420 : 180.0) OSBP(oxysterol binding protein)-related protein 3C (ORP3C); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein, conserved site (InterPro:IPR018494), Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 3B (TAIR:AT3G09300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36948 : 102.0) no description available & (reliability: 360.0) & (original description: Putative ORP3A, Description = OSBP(Oxysterol-binding protein)-related protein 4C, PFAM = PF01237)' T '31.4' 'cell.vesicle transport' 'niben044scf00013948ctg014_4535-9515' '(at4g21450 : 192.0) PapD-like superfamily protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535); BEST Arabidopsis thaliana protein match is: PapD-like superfamily protein (TAIR:AT4G05060.1). & (gnl|cdd|35660 : 83.0) no description available & (gnl|cdd|84916 : 82.7) no description available & (reliability: 384.0) & (original description: Putative MAMI, Description = Vesicle-associated protein 4-2, PFAM = PF00635)' T '31.4' 'cell.vesicle transport' 'niben044scf00014848ctg014_467-15390' '(at5g22770 : 1631.0) alpha-adaptin (alpha-ADR); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: male gametophyte, pollen tube, leaf; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Adaptor protein complex AP-2, alpha subunit (InterPro:IPR017104), Armadillo-like helical (InterPro:IPR011989), Clathrin adaptor, alpha-adaptin, appendage, Ig-like subdomain (InterPro:IPR013038), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Clathrin adaptor, alpha-adaptin, appendage, C-terminal subdomain (InterPro:IPR003164), Armadillo-type fold (InterPro:IPR016024), Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain (InterPro:IPR015873), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: Adaptor protein complex AP-2, alpha subunit (TAIR:AT5G22780.1); Has 2529 Blast hits to 2470 proteins in 297 species: Archae - 0; Bacteria - 0; Metazoa - 987; Fungi - 687; Plants - 265; Viruses - 0; Other Eukaryotes - 590 (source: NCBI BLink). & (gnl|cdd|36293 : 1163.0) no description available & (gnl|cdd|85562 : 329.0) no description available & (reliability: 3262.0) & (original description: Putative AP2A, Description = Putative AP-2 complex subunit alpha, PFAM = PF01602;PF02883;PF02296)' T '31.4' 'cell.vesicle transport' 'niben044scf00016201ctg016_1225-12022' '(at5g03540 : 476.0) AtEXO70A1 is a member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into nine clusters on the phylogenetic tree; exocyst subunit exo70 family protein A1 (EXO70A1); CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein A2 (TAIR:AT5G52340.1). & (gnl|cdd|37555 : 306.0) no description available & (gnl|cdd|86233 : 202.0) no description available & (reliability: 952.0) & (original description: Putative At5g52350, Description = Emb}, PFAM = PF03081;PF03081)' T '31.4' 'cell.vesicle transport' 'niben044scf00017255ctg003_2248-9162' '(at2g45200 : 382.0) Encodes a member of the GOS1 (Golgi SNARE) gene family.; golgi snare 12 (GOS12); FUNCTIONS IN: SNARE binding; INVOLVED IN: cellular membrane fusion, intra-Golgi vesicle-mediated transport; LOCATED IN: cytosol, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: golgi snare 11 (TAIR:AT1G15880.1). & (gnl|cdd|38418 : 256.0) no description available & (gnl|cdd|68577 : 91.9) no description available & (reliability: 764.0) & (original description: Putative GOS12, Description = Golgi SNAP receptor complex member 1-2, PFAM = PF12352)' T '31.4' 'cell.vesicle transport' 'niben044scf00017309ctg016_1579-13542' '(at4g12770 : 256.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G12780.1). & (gnl|cdd|35652 : 189.0) no description available & (gnl|cdd|70008 : 90.6) no description available & (reliability: 512.0) & (original description: Putative AUXI1, Description = Auxilin-related protein 1, PFAM = )' T '31.4' 'cell.vesicle transport' 'niben044scf00018433ctg001_12432-15407' '(at2g38360 : 197.0) prenylated RAB acceptor 1.B4 (PRA1.B4); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: prenylated RAB acceptor 1.B5 (TAIR:AT5G01640.1); Has 506 Blast hits to 506 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 53; Plants - 299; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|38352 : 193.0) no description available & (gnl|cdd|86276 : 159.0) no description available & (reliability: 394.0) & (original description: Putative PRA1B4, Description = PRA1 family protein B4, PFAM = PF03208)' T '31.4' 'cell.vesicle transport' 'niben044scf00018516ctg013_877-8159' '(at5g58060 : 327.0) member of YKT6 Gene Family; YKT61; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Synaptobrevin (InterPro:IPR001388), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Synaptobrevin family protein (TAIR:AT5G58180.2); Has 1363 Blast hits to 1363 proteins in 233 species: Archae - 0; Bacteria - 0; Metazoa - 381; Fungi - 253; Plants - 448; Viruses - 0; Other Eukaryotes - 281 (source: NCBI BLink). & (gnl|cdd|36079 : 259.0) no description available & (gnl|cdd|34744 : 100.0) no description available & (reliability: 654.0) & (original description: Putative YKT61, Description = VAMP-like protein YKT61, PFAM = PF00957;PF13774)' T '31.4' 'cell.vesicle transport' 'niben044scf00018824ctg004_1-12626' '(at5g11490 : 504.0) adaptin family protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, beta-adaptin, appendage, C-terminal subdomain (InterPro:IPR015151), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Adaptor protein complex, beta subunit (InterPro:IPR016342), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: Adaptin family protein (TAIR:AT4G23460.1). & (gnl|cdd|36279 : 282.0) no description available & (gnl|cdd|34699 : 155.0) no description available & (reliability: 1008.0) & (original description: Putative AP4B, Description = Adaptor protein complex 4 subunit beta, PFAM = PF01602)' T '31.4' 'cell.vesicle transport' 'niben044scf00018824ctg013_1-9699' '(at5g11490 : 798.0) adaptin family protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, beta-adaptin, appendage, C-terminal subdomain (InterPro:IPR015151), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Adaptor protein complex, beta subunit (InterPro:IPR016342), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: Adaptin family protein (TAIR:AT4G23460.1). & (gnl|cdd|36279 : 378.0) no description available & (gnl|cdd|85562 : 137.0) no description available & (reliability: 1596.0) & (original description: Putative 16817, Description = Beta-adaptin-like protein, PFAM = PF01602;PF09066)' T '31.4' 'cell.vesicle transport' 'niben044scf00018842ctg001_3080-10943' '(at5g05010 : 702.0) clathrin adaptor complexes medium subunit family protein; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Longin-like (InterPro:IPR011012); Has 717 Blast hits to 709 proteins in 223 species: Archae - 0; Bacteria - 2; Metazoa - 237; Fungi - 248; Plants - 88; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (p49661|copd_orysa : 651.0) Coatomer subunit delta (Delta-coat protein) (Delta-COP) (Archain) - Oryza sativa (Rice) & (gnl|cdd|37846 : 554.0) no description available & (gnl|cdd|85129 : 103.0) no description available & (reliability: 1404.0) & (original description: Putative copd, Description = Coatomer subunit delta, PFAM = PF00928)' T '31.4' 'cell.vesicle transport' 'niben044scf00019316ctg006_4290-8035' '(at5g13150 : 542.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein C1 (EXO70C1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein C2 (TAIR:AT5G13990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37555 : 443.0) no description available & (gnl|cdd|86233 : 336.0) no description available & (reliability: 1022.0) & (original description: Putative BnaA03g04210D, Description = BnaA03g04210D protein, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'niben044scf00021970ctg007_631-6558' '(at5g22360 : 350.0) Member of Synaptobrevin-like AtVAMP7C, v-SNARE protein family.; vesicle-associated membrane protein 714 (VAMP714); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: Golgi apparatus, vacuole, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 713 (TAIR:AT5G11150.1); Has 2317 Blast hits to 2315 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 867; Fungi - 487; Plants - 553; Viruses - 0; Other Eukaryotes - 410 (source: NCBI BLink). & (gnl|cdd|36077 : 286.0) no description available & (gnl|cdd|85150 : 85.7) no description available & (reliability: 700.0) & (original description: Putative VAMP714, Description = Vesicle-associated membrane protein 714, PFAM = PF00957;PF13774)' T '31.4' 'cell.vesicle transport' 'niben044scf00022632ctg018_3205-6233' '(at5g52270 : 179.0) SNARE-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Synaptobrevin family protein (TAIR:AT1G11890.1); Has 498 Blast hits to 498 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 226; Fungi - 127; Plants - 80; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36080 : 155.0) no description available & (reliability: 358.0) & (original description: Putative BnaC03g15560D, Description = BnaC03g15560D protein, PFAM = PF13774)' T '31.4' 'cell.vesicle transport' 'niben044scf00022907ctg014_14721-17846' '(at5g01430 : 93.6) Got1/Sft2-like vescicle transport protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Got1/SFT2-like (InterPro:IPR007305); BEST Arabidopsis thaliana protein match is: Got1/Sft2-like vescicle transport protein family (TAIR:AT3G49420.1). & (reliability: 187.2) & (original description: Putative GOT1A, Description = Putative Golgi transport protein 1, PFAM = PF04178)' T '31.4' 'cell.vesicle transport' 'niben044scf00023406ctg001_541-7088' '(at4g35410 : 295.0) Clathrin adaptor complex small chain family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, clathrin vesicle coat, clathrin coat of trans-Golgi network vesicle, clathrin adaptor complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor AP1, sigma subunit (InterPro:IPR015604), Adaptor protein complex, sigma subunit (InterPro:IPR016635), Clathrin adaptor, sigma subunit/coatomer, zeta subunit (InterPro:IPR000804), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: associated protein 19 (TAIR:AT2G17380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36152 : 208.0) no description available & (gnl|cdd|34635 : 187.0) no description available & (o50016|ap2s1_maize : 150.0) AP-2 complex subunit sigma-1 (Clathrin coat assembly protein AP17) (Clathrin coat-associated protein AP17) (Plasma membrane adaptor AP-2 17 kDa protein) (Clathrin assembly protein 2 small chain) - Zea mays (Maize) & (reliability: 590.0) & (original description: Putative ap1, Description = AP-1 complex subunit sigma-2, PFAM = PF01217)' T '31.4' 'cell.vesicle transport' 'niben044scf00023644ctg002_32096-43433' '(at4g22540 : 993.0) OSBP(oxysterol binding protein)-related protein 2A (ORP2A); CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 2B (TAIR:AT4G12460.1). & (gnl|cdd|36948 : 606.0) no description available & (gnl|cdd|85327 : 227.0) no description available & (reliability: 1986.0) & (original description: Putative ORP1A, Description = Oxysterol-binding protein-related protein 1A, PFAM = PF15413;PF01237)' T '31.4' 'cell.vesicle transport' 'niben044scf00023673ctg000_1804-14020' '(at4g23460 : 1402.0) Adaptin family protein; FUNCTIONS IN: protein transporter activity, clathrin binding, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Armadillo-like helical (InterPro:IPR011989), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Clathrin adaptor, beta-adaptin, appendage, Ig-like subdomain (InterPro:IPR013037), Clathrin adaptor, beta-adaptin, appendage, C-terminal subdomain (InterPro:IPR015151), Beta2-adaptin/TATA-box binding, C-terminal (InterPro:IPR012295), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Adaptor protein complex, beta subunit (InterPro:IPR016342), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: Adaptin family protein (TAIR:AT4G11380.1); Has 3513 Blast hits to 3431 proteins in 288 species: Archae - 10; Bacteria - 22; Metazoa - 1477; Fungi - 873; Plants - 441; Viruses - 0; Other Eukaryotes - 690 (source: NCBI BLink). & (gnl|cdd|36279 : 874.0) no description available & (gnl|cdd|85562 : 499.0) no description available & (reliability: 2804.0) & (original description: Putative ap1b1, Description = AP complex subunit beta, PFAM = PF09066;PF01602;PF02883)' T '31.4' 'cell.vesicle transport' 'niben044scf00024253ctg003_17214-22213' '(at5g12370 : 349.0) exocyst complex component sec10 (SEC10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: exocytosis, vesicle docking; LOCATED IN: plasma membrane, membrane, exocyst; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exocyst complex component Sec10 (InterPro:IPR009976); Has 533 Blast hits to 489 proteins in 174 species: Archae - 0; Bacteria - 6; Metazoa - 178; Fungi - 253; Plants - 59; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (q2qv94|exoc5_orysa : 315.0) Exocyst complex component 5 (Exocyst complex component Sec10) - Oryza sativa (Rice) & (gnl|cdd|70844 : 152.0) no description available & (reliability: 698.0) & (original description: Putative SEC10, Description = Exocyst complex component 5, PFAM = PF07393)' T '31.4' 'cell.vesicle transport' 'niben044scf00024253ctg004_1-8938' '(at5g12370 : 647.0) exocyst complex component sec10 (SEC10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: exocytosis, vesicle docking; LOCATED IN: plasma membrane, membrane, exocyst; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exocyst complex component Sec10 (InterPro:IPR009976); Has 533 Blast hits to 489 proteins in 174 species: Archae - 0; Bacteria - 6; Metazoa - 178; Fungi - 253; Plants - 59; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (q2qv94|exoc5_orysa : 576.0) Exocyst complex component 5 (Exocyst complex component Sec10) - Oryza sativa (Rice) & (gnl|cdd|70844 : 388.0) no description available & (gnl|cdd|38949 : 99.0) no description available & (reliability: 1294.0) & (original description: Putative SEC10, Description = Exocyst complex component 5, PFAM = PF07393;PF07393)' T '31.4' 'cell.vesicle transport' 'niben044scf00024253ctg008_1-4697' '(q2qv94|exoc5_orysa : 182.0) Exocyst complex component 5 (Exocyst complex component Sec10) - Oryza sativa (Rice) & (at5g12370 : 176.0) exocyst complex component sec10 (SEC10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: exocytosis, vesicle docking; LOCATED IN: plasma membrane, membrane, exocyst; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exocyst complex component Sec10 (InterPro:IPR009976); Has 533 Blast hits to 489 proteins in 174 species: Archae - 0; Bacteria - 6; Metazoa - 178; Fungi - 253; Plants - 59; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|70844 : 115.0) no description available & (reliability: 352.0) & (original description: Putative SEC10, Description = Exocyst complex component 5, PFAM = PF07393)' T '31.4' 'cell.vesicle transport' 'niben044scf00024712ctg000_1-6888' '(at1g50500 : 567.0) encodes a member of VPS53 family protein involved in the retrograde trafficking of vesicles to the late Golgi. Mutants in this gene are more sensitive to heat and osmotic stress.; HEAT-INTOLERANT 1 (HIT1); CONTAINS InterPro DOMAIN/s: Vps53-like, N-terminal (InterPro:IPR007234); BEST Arabidopsis thaliana protein match is: Membrane trafficking VPS53 family protein (TAIR:AT1G50970.1). & (gnl|cdd|37391 : 223.0) no description available & (reliability: 1134.0) & (original description: Putative HIT1, Description = Vps53-like, N-terminal, PFAM = PF04100)' T '31.4' 'cell.vesicle transport' 'niben044scf00026601ctg009_4200-18885' '(at3g11130 : 3022.0) Clathrin, heavy chain; FUNCTIONS IN: structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Clathrin, heavy chain (InterPro:IPR016341), Clathrin, heavy chain, linker/propeller domain (InterPro:IPR016025), Tetratricopeptide-like helical (InterPro:IPR011990), Clathrin, heavy chain, propeller, N-terminal (InterPro:IPR001473), Clathrin, heavy chain, linker, core motif (InterPro:IPR015348), Clathrin, heavy chain, propeller repeat (InterPro:IPR022365), Armadillo-type fold (InterPro:IPR016024), Clathrin, heavy chain/VPS, 7-fold repeat (InterPro:IPR000547); BEST Arabidopsis thaliana protein match is: Clathrin, heavy chain (TAIR:AT3G08530.1); Has 1621 Blast hits to 1503 proteins in 495 species: Archae - 0; Bacteria - 35; Metazoa - 935; Fungi - 178; Plants - 133; Viruses - 0; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|36203 : 2681.0) no description available & (gnl|cdd|47627 : 119.0) no description available & (reliability: 6044.0) & (original description: Putative CHC2, Description = Clathrin heavy chain 2, PFAM = PF00637;PF00637;PF00637;PF00637;PF00637;PF00637;PF00637;PF01394;PF01394;PF13838;PF09268)' T '31.4' 'cell.vesicle transport' 'niben044scf00027540ctg002_3279-12959' '(at1g64350 : 387.0) seh1-like protein; SEH1H; FUNCTIONS IN: nucleotide binding; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT2G30050.1); Has 1315 Blast hits to 1213 proteins in 251 species: Archae - 0; Bacteria - 230; Metazoa - 335; Fungi - 407; Plants - 224; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (gnl|cdd|37656 : 277.0) no description available & (reliability: 774.0) & (original description: Putative SEH1, Description = Protein SEH1, PFAM = PF00400)' T '31.4' 'cell.vesicle transport' 'niben044scf00028859ctg008_103-16350' '(at1g71270 : 1093.0) Encodes a homolog of the yeast Vps52p/SAC2. Involved in pollen tube germination and growth. Located in multiple endomembrane organelles including the golgi. The yeast protein has been shown to be located at the late Golgi and to function in a complex involved in retrograde trafficking of vesicles between the early endosomal compartment and the trans-Golgi network.; POKY POLLEN TUBE (POK); CONTAINS InterPro DOMAIN/s: Vps52/Sac2 (InterPro:IPR007258); BEST Arabidopsis thaliana protein match is: Vps52 / Sac2 family (TAIR:AT1G71300.1); Has 820 Blast hits to 773 proteins in 240 species: Archae - 10; Bacteria - 70; Metazoa - 261; Fungi - 156; Plants - 82; Viruses - 2; Other Eukaryotes - 239 (source: NCBI BLink). & (gnl|cdd|37172 : 781.0) no description available & (gnl|cdd|67733 : 566.0) no description available & (reliability: 2186.0) & (original description: Putative VPS52, Description = Vacuolar protein sorting-associated protein 52 A, PFAM = PF04129)' T '31.4' 'cell.vesicle transport' 'niben044scf00029684ctg010_1155-9952' '(at5g05010 : 729.0) clathrin adaptor complexes medium subunit family protein; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Longin-like (InterPro:IPR011012); Has 717 Blast hits to 709 proteins in 223 species: Archae - 0; Bacteria - 2; Metazoa - 237; Fungi - 248; Plants - 88; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (p49661|copd_orysa : 677.0) Coatomer subunit delta (Delta-coat protein) (Delta-COP) (Archain) - Oryza sativa (Rice) & (gnl|cdd|37846 : 578.0) no description available & (gnl|cdd|85129 : 104.0) no description available & (reliability: 1458.0) & (original description: Putative copd, Description = Coatomer subunit delta, PFAM = PF00928)' T '31.4' 'cell.vesicle transport' 'niben044scf00030108ctg002_6315-12940' '(at3g22845 : 352.0) emp24/gp25L/p24 family/GOLD family protein; INVOLVED IN: transport; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT3G07680.1); Has 1821 Blast hits to 1821 proteins in 239 species: Archae - 0; Bacteria - 0; Metazoa - 918; Fungi - 476; Plants - 264; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|36905 : 210.0) no description available & (reliability: 704.0) & (original description: Putative At3g22845, Description = Transmembrane emp24 domain-containing protein p24beta3, PFAM = PF01105)' T '31.4' 'cell.vesicle transport' 'niben044scf00031141ctg008_2600-8196' '(at1g21380 : 139.0) Target of Myb protein 1; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), Target of Myb protein 1 (InterPro:IPR014645), GAT (InterPro:IPR004152), VHS subgroup (InterPro:IPR018205), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: Target of Myb protein 1 (TAIR:AT1G76970.1); Has 1707 Blast hits to 1699 proteins in 198 species: Archae - 0; Bacteria - 6; Metazoa - 892; Fungi - 452; Plants - 279; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (gnl|cdd|36303 : 92.4) no description available & (reliability: 278.0) & (original description: Putative TaSAG2, Description = ENTH/VHS/GAT family protein, PFAM = PF03127)' T '31.4' 'cell.vesicle transport' 'niben044scf00031419ctg001_119-6577' '(at4g34660 : 442.0) SH3 domain-containing protein; FUNCTIONS IN: clathrin binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Src homology-3 domain (InterPro:IPR001452); BEST Arabidopsis thaliana protein match is: SH3 domain-containing protein (TAIR:AT4G18060.1). & (reliability: 884.0) & (original description: Putative SH3P2, Description = SH3 domain-containing protein 2, PFAM = PF14604;PF03114)' T '31.4' 'cell.vesicle transport' 'niben044scf00031972ctg000_1354-5014' '(at1g61290 : 386.0) member of SYP12 Gene Family; syntaxin of plants 124 (SYP124); CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 125 (TAIR:AT1G11250.1); Has 2975 Blast hits to 2948 proteins in 317 species: Archae - 21; Bacteria - 77; Metazoa - 1321; Fungi - 552; Plants - 504; Viruses - 0; Other Eukaryotes - 500 (source: NCBI BLink). & (gnl|cdd|36028 : 259.0) no description available & (gnl|cdd|29141 : 116.0) no description available & (reliability: 772.0) & (original description: Putative SYP124, Description = Syntaxin-124, PFAM = PF05739;PF00804)' T '31.4' 'cell.vesicle transport' 'niben044scf00032250ctg018_975-17076' '(at3g11130 : 2978.0) Clathrin, heavy chain; FUNCTIONS IN: structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Clathrin, heavy chain (InterPro:IPR016341), Clathrin, heavy chain, linker/propeller domain (InterPro:IPR016025), Tetratricopeptide-like helical (InterPro:IPR011990), Clathrin, heavy chain, propeller, N-terminal (InterPro:IPR001473), Clathrin, heavy chain, linker, core motif (InterPro:IPR015348), Clathrin, heavy chain, propeller repeat (InterPro:IPR022365), Armadillo-type fold (InterPro:IPR016024), Clathrin, heavy chain/VPS, 7-fold repeat (InterPro:IPR000547); BEST Arabidopsis thaliana protein match is: Clathrin, heavy chain (TAIR:AT3G08530.1); Has 1621 Blast hits to 1503 proteins in 495 species: Archae - 0; Bacteria - 35; Metazoa - 935; Fungi - 178; Plants - 133; Viruses - 0; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|36203 : 2621.0) no description available & (gnl|cdd|47627 : 108.0) no description available & (reliability: 5956.0) & (original description: Putative CHC2, Description = Clathrin heavy chain 2, PFAM = PF01394;PF01394;PF13838;PF09268;PF00637;PF00637;PF00637;PF00637;PF00637;PF00637;PF00637)' T '31.4' 'cell.vesicle transport' 'niben044scf00034639ctg005_24077-28792' '(at3g09740 : 265.0) syntaxin of plants 71 (SYP71); syntaxin of plants 71 (SYP71); FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, protein targeting to membrane; LOCATED IN: integral to membrane, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), Syntaxin/epimorphin, conserved site (InterPro:IPR006012); BEST Arabidopsis thaliana protein match is: syntaxin of plants 72 (TAIR:AT3G45280.1); Has 541 Blast hits to 539 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 116; Plants - 188; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (reliability: 530.0) & (original description: Putative SYP71, Description = Syntaxin-71, PFAM = PF05739)' T '31.4' 'cell.vesicle transport' 'niben044scf00035719ctg002_9424-23420' '(at4g08180 : 1034.0) OSBP(oxysterol binding protein)-related protein 1C (ORP1C); FUNCTIONS IN: phosphoinositide binding, oxysterol binding; INVOLVED IN: steroid metabolic process, signal transduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Oxysterol-binding protein (InterPro:IPR000648), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 1A (TAIR:AT2G31020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36948 : 661.0) no description available & (gnl|cdd|85327 : 226.0) no description available & (reliability: 2068.0) & (original description: Putative ORP1C, Description = Oxysterol-binding protein-related protein 1C, PFAM = PF01237;PF15413)' T '31.4' 'cell.vesicle transport' 'niben044scf00036207ctg001_3558-7930' '(at3g11130 : 525.0) Clathrin, heavy chain; FUNCTIONS IN: structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Clathrin, heavy chain (InterPro:IPR016341), Clathrin, heavy chain, linker/propeller domain (InterPro:IPR016025), Tetratricopeptide-like helical (InterPro:IPR011990), Clathrin, heavy chain, propeller, N-terminal (InterPro:IPR001473), Clathrin, heavy chain, linker, core motif (InterPro:IPR015348), Clathrin, heavy chain, propeller repeat (InterPro:IPR022365), Armadillo-type fold (InterPro:IPR016024), Clathrin, heavy chain/VPS, 7-fold repeat (InterPro:IPR000547); BEST Arabidopsis thaliana protein match is: Clathrin, heavy chain (TAIR:AT3G08530.1); Has 1621 Blast hits to 1503 proteins in 495 species: Archae - 0; Bacteria - 35; Metazoa - 935; Fungi - 178; Plants - 133; Viruses - 0; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|36203 : 504.0) no description available & (gnl|cdd|47627 : 95.7) no description available & (reliability: 1050.0) & (original description: Putative chc1, Description = Clathrin heavy chain, PFAM = PF00637;PF00637)' T '31.4' 'cell.vesicle transport' 'niben044scf00036546ctg000_2940-8189' '(at1g04760 : 338.0) member of Synaptobrevin -like protein family; vesicle-associated membrane protein 726 (VAMP726); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: endosome, plasma membrane, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 725 (TAIR:AT2G32670.1); Has 2469 Blast hits to 2468 proteins in 263 species: Archae - 0; Bacteria - 0; Metazoa - 990; Fungi - 448; Plants - 610; Viruses - 0; Other Eukaryotes - 421 (source: NCBI BLink). & (gnl|cdd|36077 : 324.0) no description available & (gnl|cdd|85150 : 103.0) no description available & (reliability: 676.0) & (original description: Putative VAMP726, Description = Putative vesicle-associated membrane protein 726, PFAM = PF13774;PF00957)' T '31.4' 'cell.vesicle transport' 'niben044scf00037099ctg004_1166-4180' '(at3g17440 : 375.0) member of NPSN Gene Family; novel plant snare 13 (NPSN13); FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: novel plant snare 12 (TAIR:AT1G48240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 750.0) & (original description: Putative NPSN13, Description = Novel plant SNARE 13, PFAM = )' T '31.4' 'cell.vesicle transport' 'niben044scf00039430ctg003_1-4498' '(at4g12780 : 165.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G12770.1). & (gnl|cdd|35652 : 162.0) no description available & (reliability: 330.0) & (original description: Putative AUL1, Description = Auxilin-related protein 2, PFAM = )' T '31.4' 'cell.vesicle transport' 'niben044scf00039494ctg004_1388-10485' '(at4g11740 : 334.0) Isolated as a suppressor of a dominant mutant in the Ara4 gene that was expressed in yeast ypt1 mutant strains. A novel protein with a small region of similarity to coil-coiled domain of yeast VSP27 protein.; SAY1; INVOLVED IN: vesicle-mediated transport; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012), Ubiquitin interacting motif (InterPro:IPR003903), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G23040.1); Has 5504 Blast hits to 4000 proteins in 512 species: Archae - 3; Bacteria - 644; Metazoa - 2099; Fungi - 780; Plants - 360; Viruses - 48; Other Eukaryotes - 1570 (source: NCBI BLink). & (gnl|cdd|36577 : 144.0) no description available & (reliability: 668.0) & (original description: Putative PUX8, Description = Plant UBX domain-containing protein 8, PFAM = PF14555;PF00789)' T '31.4' 'cell.vesicle transport' 'niben044scf00041061ctg000_1-7604' '(at1g79830 : 170.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC5 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (139 aa) portion of the protein. The C-terminal portion of the protein can also specifically interact with two members of the Rab family of GTPases (RabH1b and RabH1c).; golgin candidate 5 (GC5); FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TATA element modulatory factor 1 DNA binding (InterPro:IPR022092), TATA element modulatory factor 1 TATA binding (InterPro:IPR022091). & (gnl|cdd|39872 : 107.0) no description available & (reliability: 340.0) & (original description: Putative GC5, Description = Golgin candidate 5, PFAM = )' T '31.4' 'cell.vesicle transport' 'niben044scf00041513ctg001_5638-11296' '(at3g22845 : 338.0) emp24/gp25L/p24 family/GOLD family protein; INVOLVED IN: transport; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT3G07680.1); Has 1821 Blast hits to 1821 proteins in 239 species: Archae - 0; Bacteria - 0; Metazoa - 918; Fungi - 476; Plants - 264; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|36905 : 203.0) no description available & (reliability: 676.0) & (original description: Putative At3g22845, Description = Transmembrane emp24 domain-containing protein p24beta3, PFAM = PF01105)' T '31.4' 'cell.vesicle transport' 'niben044scf00046118ctg001_75-5595' '(at3g22845 : 288.0) emp24/gp25L/p24 family/GOLD family protein; INVOLVED IN: transport; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT3G07680.1); Has 1821 Blast hits to 1821 proteins in 239 species: Archae - 0; Bacteria - 0; Metazoa - 918; Fungi - 476; Plants - 264; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|36905 : 160.0) no description available & (reliability: 576.0) & (original description: Putative pco090181a, Description = Transmembrane emp24 domain-containing protein p24beta3, PFAM = PF01105)' T '31.4' 'cell.vesicle transport' 'niben044scf00046899ctg005_12151-15345' '(at4g32640 : 214.0) Sec23/Sec24 protein transport family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular protein transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPII vesicle coat; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: clone eighty-four (TAIR:AT3G44340.1); Has 66049 Blast hits to 38054 proteins in 1391 species: Archae - 34; Bacteria - 8764; Metazoa - 33131; Fungi - 9611; Plants - 5387; Viruses - 1213; Other Eukaryotes - 7909 (source: NCBI BLink). & (gnl|cdd|37195 : 207.0) no description available & (gnl|cdd|34633 : 106.0) no description available & (reliability: 428.0) & (original description: Putative CEF, Description = Protein transport protein Sec24-like CEF, PFAM = PF00626;PF04815)' T '31.4' 'cell.vesicle transport' 'niben044scf00047971ctg000_829-8882' '(at1g08820 : 160.0) Encodes VAP33-like protein that interacts with cowpea mosaic virus protein 60K. Is a SNARE-like protein that may be involved in vesicular transport to or from the ER.; vamp/synaptobrevin-associated protein 27-2 (VAP27-2); FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular transport; LOCATED IN: plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535); BEST Arabidopsis thaliana protein match is: vesicle associated protein (TAIR:AT3G60600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35660 : 101.0) no description available & (gnl|cdd|84916 : 100.0) no description available & (reliability: 320.0) & (original description: Putative BnaC05g06420D, Description = BnaC05g06420D protein, PFAM = PF00635)' T '31.4' 'cell.vesicle transport' 'niben044scf00048496ctg002_19092-33417' '(at3g11130 : 3028.0) Clathrin, heavy chain; FUNCTIONS IN: structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Clathrin, heavy chain (InterPro:IPR016341), Clathrin, heavy chain, linker/propeller domain (InterPro:IPR016025), Tetratricopeptide-like helical (InterPro:IPR011990), Clathrin, heavy chain, propeller, N-terminal (InterPro:IPR001473), Clathrin, heavy chain, linker, core motif (InterPro:IPR015348), Clathrin, heavy chain, propeller repeat (InterPro:IPR022365), Armadillo-type fold (InterPro:IPR016024), Clathrin, heavy chain/VPS, 7-fold repeat (InterPro:IPR000547); BEST Arabidopsis thaliana protein match is: Clathrin, heavy chain (TAIR:AT3G08530.1); Has 1621 Blast hits to 1503 proteins in 495 species: Archae - 0; Bacteria - 35; Metazoa - 935; Fungi - 178; Plants - 133; Viruses - 0; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|36203 : 2692.0) no description available & (gnl|cdd|47627 : 121.0) no description available & (reliability: 6056.0) & (original description: Putative CHC2, Description = Clathrin heavy chain 2, PFAM = PF01394;PF01394;PF00637;PF00637;PF00637;PF00637;PF00637;PF00637;PF00637;PF13838;PF09268)' T '31.4' 'cell.vesicle transport' 'niben044scf00055690ctg002_1-2690' '(at5g51430 : 383.0) Encodes a protein that is homologous to Cog7, a subunit of the conserved oligomeric Golgi (COG) complex, which is required for the normal morphology and function of the Golgi apparatus. It is likely to be involved in transport or retention of Golgi-localized proteins and in maintenance of Golgi morphology.; EMBRYO YELLOW (EYE); CONTAINS InterPro DOMAIN/s: Conserved oligomeric Golgi complex, subunit 7 (InterPro:IPR019335); Has 231 Blast hits to 215 proteins in 93 species: Archae - 2; Bacteria - 0; Metazoa - 129; Fungi - 18; Plants - 50; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|39384 : 347.0) no description available & (reliability: 766.0) & (original description: Putative Os06g0669600, Description = Os06g0669600 protein, PFAM = PF10191)' T '31.4' 'cell.vesicle transport' 'niben044scf00060499ctg001_1-7139' '(at1g08820 : 206.0) Encodes VAP33-like protein that interacts with cowpea mosaic virus protein 60K. Is a SNARE-like protein that may be involved in vesicular transport to or from the ER.; vamp/synaptobrevin-associated protein 27-2 (VAP27-2); FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular transport; LOCATED IN: plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535); BEST Arabidopsis thaliana protein match is: vesicle associated protein (TAIR:AT3G60600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35660 : 98.8) no description available & (gnl|cdd|84916 : 90.0) no description available & (reliability: 412.0) & (original description: Putative PVA22, Description = Vesicle-associated protein 2-2, PFAM = PF00635)' T '31.4' 'cell.vesicle transport' 'niben101ctg16428_1-3786' '(at2g32670 : 354.0) member of Synaptobrevin -like protein family; vesicle-associated membrane protein 725 (VAMP725); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: endosome, plasma membrane, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 726 (TAIR:AT1G04760.1); Has 2451 Blast hits to 2449 proteins in 264 species: Archae - 0; Bacteria - 0; Metazoa - 984; Fungi - 445; Plants - 609; Viruses - 0; Other Eukaryotes - 413 (source: NCBI BLink). & (gnl|cdd|36077 : 332.0) no description available & (gnl|cdd|85150 : 101.0) no description available & (reliability: 708.0) & (original description: Putative VAMP726, Description = Putative vesicle-associated membrane protein 726, PFAM = PF00957;PF13774)' T '31.4' 'cell.vesicle transport' 'niben101scf00059_133025-141747' '(at3g09520 : 613.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H4 (EXO70H4); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: stem, sperm cell, stamen, pollen tube; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H3 (TAIR:AT3G09530.1); Has 837 Blast hits to 827 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 71; Plants - 622; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|86233 : 536.0) no description available & (gnl|cdd|37555 : 531.0) no description available & (reliability: 1226.0) & (original description: Putative ACI49, Description = ACI49, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'niben101scf00109_448945-455054' '(at5g13990 : 550.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein C2 (EXO70C2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, exocyst; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein C1 (TAIR:AT5G13150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37555 : 458.0) no description available & (gnl|cdd|86233 : 344.0) no description available & (reliability: 1100.0) & (original description: Putative EXO70C2, Description = Exocyst subunit exo70 family protein C2, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'niben101scf00126_653665-667305' '(at4g08180 : 1083.0) OSBP(oxysterol binding protein)-related protein 1C (ORP1C); FUNCTIONS IN: phosphoinositide binding, oxysterol binding; INVOLVED IN: steroid metabolic process, signal transduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Oxysterol-binding protein (InterPro:IPR000648), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 1A (TAIR:AT2G31020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36948 : 668.0) no description available & (gnl|cdd|85327 : 223.0) no description available & (reliability: 2166.0) & (original description: Putative ORP1C, Description = Oxysterol-binding protein-related protein 1C, PFAM = PF15413;PF01237)' T '31.4' 'cell.vesicle transport' 'niben101scf00127_160585-189132' '(at1g79990 : 219.0) structural molecules; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Coatomer, beta' subunit (InterPro:IPR016453), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, beta' subunit (TAIR:AT1G52360.1); Has 74269 Blast hits to 32109 proteins in 811 species: Archae - 56; Bacteria - 8450; Metazoa - 29737; Fungi - 16170; Plants - 9747; Viruses - 0; Other Eukaryotes - 10109 (source: NCBI BLink). & (gnl|cdd|39895 : 81.6) no description available & (reliability: 438.0) & (original description: Putative Sb03g026720, Description = Putative uncharacterized protein Sb03g026720, PFAM = PF09801)' T '31.4' 'cell.vesicle transport' 'niben101scf00150_294683-299205' '(at5g01430 : 184.0) Got1/Sft2-like vescicle transport protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Got1/SFT2-like (InterPro:IPR007305); BEST Arabidopsis thaliana protein match is: Got1/Sft2-like vescicle transport protein family (TAIR:AT3G49420.1). & (gnl|cdd|36954 : 134.0) no description available & (gnl|cdd|67778 : 101.0) no description available & (reliability: 368.0) & (original description: Putative golt1b, Description = Golgi transport 1 homolog B, PFAM = PF04178)' T '31.4' 'cell.vesicle transport' 'niben101scf00155_314178-322215' '(at3g09740 : 359.0) syntaxin of plants 71 (SYP71); syntaxin of plants 71 (SYP71); FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, protein targeting to membrane; LOCATED IN: integral to membrane, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), Syntaxin/epimorphin, conserved site (InterPro:IPR006012); BEST Arabidopsis thaliana protein match is: syntaxin of plants 72 (TAIR:AT3G45280.1); Has 541 Blast hits to 539 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 116; Plants - 188; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (reliability: 718.0) & (original description: Putative SYP71, Description = Syntaxin-71, PFAM = PF05739)' T '31.4' 'cell.vesicle transport' 'niben101scf00197_216489-223507' '(at1g62020 : 2097.0) Coatomer, alpha subunit; FUNCTIONS IN: structural molecule activity, transporter activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPI vesicle coat, plasma membrane, CUL4 RING ubiquitin ligase complex, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat, conserved site (InterPro:IPR019775), Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 (InterPro:IPR011048), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Coatomer, alpha subunit (InterPro:IPR016391), WD40 repeat, subgroup (InterPro:IPR019781), Coatomer, alpha subunit, C-terminal (InterPro:IPR010714); BEST Arabidopsis thaliana protein match is: Coatomer, alpha subunit (TAIR:AT2G21390.1); Has 77998 Blast hits to 29937 proteins in 781 species: Archae - 58; Bacteria - 8535; Metazoa - 32327; Fungi - 16718; Plants - 10020; Viruses - 0; Other Eukaryotes - 10340 (source: NCBI BLink). & (gnl|cdd|35513 : 1842.0) no description available & (gnl|cdd|67661 : 614.0) no description available & (p93107|pf20_chlre : 98.2) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 4194.0) & (original description: Putative copA, Description = Coatomer subunit alpha, PFAM = PF06957;PF00400;PF00400;PF00400;PF00400;PF00400;PF04053)' T '31.4' 'cell.vesicle transport' 'niben101scf00202_135580-138991' '(gnl|cdd|66892 : 266.0) no description available & (gnl|cdd|36901 : 264.0) no description available & (at2g21600 : 240.0) Key player of retrieval of ER membrane proteins; endoplasmatic reticulum retrieval protein 1B (RER1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: retrograde vesicle-mediated transport, Golgi to ER; LOCATED IN: Golgi apparatus, endoplasmic reticulum, cis-Golgi network; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: Rer1 family protein (TAIR:AT4G39220.1); Has 516 Blast hits to 512 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 154; Fungi - 152; Plants - 129; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 480.0) & (original description: Putative RER1B, Description = Protein RER1B, PFAM = PF03248)' T '31.4' 'cell.vesicle transport' 'niben101scf00207_374928-408357' '(at3g03800 : 291.0) member of SYP13 Gene Family; syntaxin of plants 131 (SYP131); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: intracellular protein transport, cellular membrane fusion; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 132 (TAIR:AT5G08080.1); Has 2798 Blast hits to 2798 proteins in 353 species: Archae - 4; Bacteria - 78; Metazoa - 1293; Fungi - 501; Plants - 492; Viruses - 0; Other Eukaryotes - 430 (source: NCBI BLink). & (gnl|cdd|36028 : 252.0) no description available & (gnl|cdd|29141 : 104.0) no description available & (reliability: 582.0) & (original description: Putative SYP131, Description = Putative syntaxin-131, PFAM = PF05739;PF00804)' T '31.4' 'cell.vesicle transport' 'niben101scf00271_679694-685055' '(at1g30630 : 471.0) Coatomer epsilon subunit; FUNCTIONS IN: protein transporter activity, structural molecule activity, binding; INVOLVED IN: retrograde vesicle-mediated transport, Golgi to ER; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Coatomer, epsilon subunit (InterPro:IPR006822); BEST Arabidopsis thaliana protein match is: Coatomer epsilon subunit (TAIR:AT2G34840.1); Has 442 Blast hits to 442 proteins in 180 species: Archae - 6; Bacteria - 14; Metazoa - 175; Fungi - 90; Plants - 92; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|68311 : 405.0) no description available & (gnl|cdd|38291 : 346.0) no description available & (reliability: 942.0) & (original description: Putative cop2, Description = Coatomer subunit epsilon, PFAM = PF04733)' T '31.4' 'cell.vesicle transport' 'niben101scf00314_208693-216561' '(at5g50375 : 418.0) Converts pentacyclic cyclopropyl sterols to conventional tetracyclic sterols. CPI1 function during and just after division and support gravitropism by establishing polar PIN2 localization. Required for endocytosis of PIN2; cyclopropyl isomerase (CPI1); FUNCTIONS IN: cycloeucalenol cycloisomerase activity; INVOLVED IN: pinocytosis, sterol biosynthetic process, positive gravitropism, cytokinesis; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cycloeucalenol cycloisomerase (InterPro:IPR020532). & (reliability: 836.0) & (original description: Putative CPI1, Description = Cycloeucalenol cycloisomerase, PFAM = )' T '31.4' 'cell.vesicle transport' 'niben101scf00349_667124-676313' '(at1g28490 : 267.0) Encodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed.; syntaxin of plants 61 (SYP61); CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin 6, N-terminal (InterPro:IPR015260); BEST Arabidopsis thaliana protein match is: syntaxin of plants 52 (TAIR:AT1G79590.2); Has 786 Blast hits to 786 proteins in 195 species: Archae - 0; Bacteria - 4; Metazoa - 244; Fungi - 238; Plants - 166; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink). & (gnl|cdd|38412 : 143.0) no description available & (gnl|cdd|87826 : 107.0) no description available & (reliability: 534.0) & (original description: Putative SYP61, Description = Syntaxin-61, PFAM = PF09177;PF05739)' T '31.4' 'cell.vesicle transport' 'niben101scf00395_287892-290551' '(at2g38360 : 187.0) prenylated RAB acceptor 1.B4 (PRA1.B4); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: prenylated RAB acceptor 1.B5 (TAIR:AT5G01640.1); Has 506 Blast hits to 506 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 53; Plants - 299; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|38352 : 187.0) no description available & (gnl|cdd|86276 : 154.0) no description available & (reliability: 374.0) & (original description: Putative PRA1B4, Description = PRA1 family protein B4, PFAM = PF03208)' T '31.4' 'cell.vesicle transport' 'niben101scf00401_45248-64452' '(at5g58440 : 569.0) sorting nexin 2A (SNX2a); FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2B (TAIR:AT5G07120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37484 : 217.0) no description available & (gnl|cdd|85027 : 84.3) no description available & (reliability: 1138.0) & (original description: Putative SNX2B, Description = Sorting nexin 2B, PFAM = PF00787;PF09325)' T '31.4' 'cell.vesicle transport' 'niben101scf00428_1546872-1556801' '(at5g47180 : 254.0) Plant VAMP (vesicle-associated membrane protein) family protein; FUNCTIONS IN: structural molecule activity; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: vesicle associated protein (TAIR:AT3G60600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35660 : 107.0) no description available & (gnl|cdd|84916 : 97.8) no description available & (reliability: 508.0) & (original description: Putative PVA21, Description = Vesicle-associated protein 2-1, PFAM = PF00635)' T '31.4' 'cell.vesicle transport' 'niben101scf00451_396715-416771' '(at3g44340 : 1030.0) homologous to yeast and animal Sec24 proteins; expression in yeast cells enhances their survival under oxidative stress conditions.; clone eighty-four (CEF); FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: response to oxidative stress, vesicle-mediated transport; LOCATED IN: COPII vesicle coat, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT4G32640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37195 : 854.0) no description available & (gnl|cdd|34633 : 480.0) no description available & (reliability: 1988.0) & (original description: Putative At4g32640, Description = Protein transport protein Sec24-like At4g32640, PFAM = PF04811;PF00626;PF04810;PF04815;PF08033)' T '31.4' 'cell.vesicle transport' 'niben101scf00482_44125-48523' '(at2g39380 : 512.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H2 (EXO70H2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: leaf apex, hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H1 (TAIR:AT3G55150.1); Has 836 Blast hits to 829 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 44; Plants - 635; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|37555 : 498.0) no description available & (gnl|cdd|86233 : 494.0) no description available & (reliability: 980.0) & (original description: Putative EXO70H7, Description = AT5g59730/mth12_130, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'niben101scf00482_45061-48445' '(at3g55150 : 293.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H1 (EXO70H1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, exocyst; EXPRESSED IN: sperm cell, root, pollen tube; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H2 (TAIR:AT2G39380.1); Has 814 Blast hits to 800 proteins in 89 species: Archae - 0; Bacteria - 0; Metazoa - 134; Fungi - 34; Plants - 631; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|37555 : 287.0) no description available & (gnl|cdd|86233 : 276.0) no description available & (reliability: 550.0) & (original description: Putative ACI49, Description = ACI49, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'niben101scf00606_401009-403905' '(at2g18260 : 332.0) member of SYP11 Gene Family; syntaxin of plants 112 (SYP112); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: intracellular protein transport, response to cold, cellular membrane fusion; LOCATED IN: nucleus; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 111 (TAIR:AT1G08560.1); Has 1733 Blast hits to 1731 proteins in 229 species: Archae - 0; Bacteria - 19; Metazoa - 889; Fungi - 210; Plants - 409; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|36028 : 185.0) no description available & (gnl|cdd|29141 : 101.0) no description available & (reliability: 664.0) & (original description: Putative SYP112, Description = Syntaxin-112, PFAM = PF00804;PF05739)' T '31.4' 'cell.vesicle transport' 'niben101scf00616_31486-43912' '(at3g27530 : 1028.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC6 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (225 aa) portion of the protein.; golgin candidate 6 (GC6); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, Golgi vesicle transport, vesicle fusion with Golgi apparatus; LOCATED IN: cytosol, Golgi apparatus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uso1/p115 like vesicle tethering protein, C-terminal (InterPro:IPR006955), Armadillo-type fold (InterPro:IPR016024), Uso1/p115 like vesicle tethering protein, head region (InterPro:IPR006953); Has 8674 Blast hits to 6651 proteins in 794 species: Archae - 167; Bacteria - 1154; Metazoa - 4083; Fungi - 784; Plants - 382; Viruses - 31; Other Eukaryotes - 2073 (source: NCBI BLink). & (gnl|cdd|36164 : 285.0) no description available & (gnl|cdd|68444 : 90.0) no description available & (reliability: 2056.0) & (original description: Putative GC6, Description = Golgin candidate 6, PFAM = PF04871;PF04869)' T '31.4' 'cell.vesicle transport' 'niben101scf00621_1100000-1129190' '(at2g20790 : 776.0) clathrin adaptor complexes medium subunit family protein; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36155 : 203.0) no description available & (reliability: 1552.0) & (original description: Putative AP5M, Description = AP-5 complex subunit mu, PFAM = PF00928)' T '31.4' 'cell.vesicle transport' 'niben101scf00621_1110553-1113239' '(at2g20790 : 290.0) clathrin adaptor complexes medium subunit family protein; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36155 : 97.7) no description available & (reliability: 580.0) & (original description: Putative AP5M, Description = AP-5 complex subunit mu, PFAM = PF00928)' T '31.4' 'cell.vesicle transport' 'niben101scf00635_320403-324577' '(at1g13890 : 221.0) Encodes a member of a gene family homologous to mammalian SNAP25, a type of SNARE proteins with two chains. There are three members in Arabidopsis: SNAP30, SNAP29, and SNAP33.; soluble N-ethylmaleimide-sensitive factor adaptor protein 30 (SNAP30); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: vesicle-mediated transport, cellular membrane fusion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, seedling growth, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: soluble N-ethylmaleimide-sensitive factor adaptor protein 33 (TAIR:AT5G61210.1); Has 915 Blast hits to 914 proteins in 177 species: Archae - 0; Bacteria - 2; Metazoa - 570; Fungi - 86; Plants - 163; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|38275 : 139.0) no description available & (reliability: 398.0) & (original description: Putative BnaA09g45980D, Description = BnaA09g45980D protein, PFAM = )' T '31.4' 'cell.vesicle transport' 'niben101scf00747_761224-766298' '(at1g72470 : 778.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein D1 (EXO70D1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein D2 (TAIR:AT1G54090.1); Has 916 Blast hits to 905 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 142; Fungi - 103; Plants - 652; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|37555 : 544.0) no description available & (gnl|cdd|86233 : 479.0) no description available & (reliability: 1556.0) & (original description: Putative EXO70D3, Description = Exocyst subunit exo70 family protein D3, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'niben101scf00837_654911-660508' '(at1g47830 : 167.0) SNARE-like superfamily protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, transport, protein transport; LOCATED IN: clathrin vesicle coat; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Adaptor protein complex, sigma subunit (InterPro:IPR016635), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complex small chain family protein (TAIR:AT4G35410.2); Has 1794 Blast hits to 1793 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 780; Fungi - 421; Plants - 260; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink). & (o50016|ap2s1_maize : 167.0) AP-2 complex subunit sigma-1 (Clathrin coat assembly protein AP17) (Clathrin coat-associated protein AP17) (Plasma membrane adaptor AP-2 17 kDa protein) (Clathrin assembly protein 2 small chain) - Zea mays (Maize) & (gnl|cdd|36153 : 160.0) no description available & (gnl|cdd|34635 : 133.0) no description available & (reliability: 334.0) & (original description: Putative aps2, Description = AP-2 complex subunit sigma, PFAM = PF01217)' T '31.4' 'cell.vesicle transport' 'niben101scf00850_158104-163343' '(at1g26670 : 236.0) member of VTI1 Gene Family. Normally localizes to the transgolgi network and plasma membrane. A dominant mutation (zip1) alters the subcellular localization of VTI12 and suppresses loss of function mutation (zag1) of VTI11. Interacts with members of the SYP family. Involved in protein trafficking to protein storage vacuoles.; VTI1B; CONTAINS InterPro DOMAIN/s: Vesicle transport v-SNARE, N-terminal (InterPro:IPR007705); BEST Arabidopsis thaliana protein match is: Vesicle transport v-SNARE family protein (TAIR:AT5G39510.1); Has 841 Blast hits to 839 proteins in 213 species: Archae - 2; Bacteria - 11; Metazoa - 288; Fungi - 144; Plants - 215; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|36879 : 194.0) no description available & (gnl|cdd|68577 : 97.3) no description available & (reliability: 472.0) & (original description: Putative VTI12, Description = Vesicle transport v-SNARE 12, PFAM = PF12352;PF05008)' T '31.4' 'cell.vesicle transport' 'niben101scf00870_824743-828536' '(at1g72470 : 753.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein D1 (EXO70D1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein D2 (TAIR:AT1G54090.1); Has 916 Blast hits to 905 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 142; Fungi - 103; Plants - 652; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|37555 : 543.0) no description available & (gnl|cdd|86233 : 480.0) no description available & (reliability: 1506.0) & (original description: Putative BnaA08g00910D, Description = BnaA08g00910D protein, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'niben101scf00890_101739-106426' '(at2g32670 : 337.0) member of Synaptobrevin -like protein family; vesicle-associated membrane protein 725 (VAMP725); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: endosome, plasma membrane, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 726 (TAIR:AT1G04760.1); Has 2451 Blast hits to 2449 proteins in 264 species: Archae - 0; Bacteria - 0; Metazoa - 984; Fungi - 445; Plants - 609; Viruses - 0; Other Eukaryotes - 413 (source: NCBI BLink). & (gnl|cdd|36077 : 329.0) no description available & (gnl|cdd|85150 : 102.0) no description available & (reliability: 674.0) & (original description: Putative VAMP71, Description = R-SNARE protein, VAMP72-family, PFAM = PF00957;PF13774)' T '31.4' 'cell.vesicle transport' 'niben101scf00893_102145-104430' '(at2g18260 : 243.0) member of SYP11 Gene Family; syntaxin of plants 112 (SYP112); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: intracellular protein transport, response to cold, cellular membrane fusion; LOCATED IN: nucleus; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 111 (TAIR:AT1G08560.1); Has 1733 Blast hits to 1731 proteins in 229 species: Archae - 0; Bacteria - 19; Metazoa - 889; Fungi - 210; Plants - 409; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|36028 : 169.0) no description available & (gnl|cdd|29141 : 91.9) no description available & (reliability: 486.0) & (original description: Putative kn, Description = Syntaxin-related protein KNOLLE, PFAM = PF05739;PF00804)' T '31.4' 'cell.vesicle transport' 'niben101scf00905_21523-25388' '(at1g61290 : 392.0) member of SYP12 Gene Family; syntaxin of plants 124 (SYP124); CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 125 (TAIR:AT1G11250.1); Has 2975 Blast hits to 2948 proteins in 317 species: Archae - 21; Bacteria - 77; Metazoa - 1321; Fungi - 552; Plants - 504; Viruses - 0; Other Eukaryotes - 500 (source: NCBI BLink). & (gnl|cdd|36028 : 265.0) no description available & (gnl|cdd|29141 : 118.0) no description available & (reliability: 784.0) & (original description: Putative SYP124, Description = Syntaxin-124, PFAM = PF00804;PF05739)' T '31.4' 'cell.vesicle transport' 'niben101scf00916_91420-101957' '(at5g58060 : 359.0) member of YKT6 Gene Family; YKT61; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Synaptobrevin (InterPro:IPR001388), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Synaptobrevin family protein (TAIR:AT5G58180.2); Has 1363 Blast hits to 1363 proteins in 233 species: Archae - 0; Bacteria - 0; Metazoa - 381; Fungi - 253; Plants - 448; Viruses - 0; Other Eukaryotes - 281 (source: NCBI BLink). & (gnl|cdd|36079 : 292.0) no description available & (gnl|cdd|34744 : 120.0) no description available & (reliability: 718.0) & (original description: Putative YKT61, Description = VAMP-like protein YKT61, PFAM = PF00957;PF13774)' T '31.4' 'cell.vesicle transport' 'niben101scf00917_387472-396698' '(gnl|cdd|66892 : 255.0) no description available & (gnl|cdd|36901 : 254.0) no description available & (at4g39220 : 213.0) Key player of retrieval of ER membrane proteins; ATRER1A; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: endoplasmatic reticulum retrieval protein 1B (TAIR:AT2G21600.1); Has 516 Blast hits to 513 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 155; Fungi - 150; Plants - 130; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative RER1A, Description = Protein RER1A, PFAM = PF03248)' T '31.4' 'cell.vesicle transport' 'niben101scf00920_84527-89397' '(at2g32670 : 363.0) member of Synaptobrevin -like protein family; vesicle-associated membrane protein 725 (VAMP725); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: endosome, plasma membrane, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 726 (TAIR:AT1G04760.1); Has 2451 Blast hits to 2449 proteins in 264 species: Archae - 0; Bacteria - 0; Metazoa - 984; Fungi - 445; Plants - 609; Viruses - 0; Other Eukaryotes - 413 (source: NCBI BLink). & (gnl|cdd|36077 : 346.0) no description available & (gnl|cdd|85150 : 103.0) no description available & (reliability: 726.0) & (original description: Putative VAMP721, Description = Vesicle-associated membrane protein 721, PFAM = PF00957;PF13774)' T '31.4' 'cell.vesicle transport' 'niben101scf00946_11669-23911' '(at4g31480 : 483.0) Coatomer, beta subunit; FUNCTIONS IN: clathrin binding, structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: male gametophyte, guard cell; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Coatomer, beta subunit, C-terminal (InterPro:IPR011710), Armadillo-like helical (InterPro:IPR011989), Coatomer, beta subunit (InterPro:IPR016460), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: Coatomer, beta subunit (TAIR:AT4G31490.1). & (gnl|cdd|36276 : 397.0) no description available & (gnl|cdd|71159 : 349.0) no description available & (reliability: 966.0) & (original description: Putative bCOP, Description = Beta-coat protein, PFAM = PF01602;PF14806;PF07718)' T '31.4' 'cell.vesicle transport' 'niben101scf00961_353253-362201' '(at4g32760 : 248.0) ENTH/VHS/GAT family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), GAT (InterPro:IPR004152), VHS subgroup (InterPro:IPR018205), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS/GAT family protein (TAIR:AT3G08790.1). & (gnl|cdd|36303 : 133.0) no description available & (gnl|cdd|66780 : 92.2) no description available & (reliability: 496.0) & (original description: Putative TaSAG2, Description = ENTH/VHS/GAT family protein, PFAM = PF03127)' T '31.4' 'cell.vesicle transport' 'niben101scf00988_612805-641245' '(at4g34450 : 1495.0) coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative; FUNCTIONS IN: clathrin binding, structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Coatomer, gamma subunit, appendage, Ig-like subdomain (InterPro:IPR013040), Armadillo-like helical (InterPro:IPR011989), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Coatomer, gamma subunit (InterPro:IPR017106), Coatomer, gamma subunit , appendage (InterPro:IPR014863), Armadillo-type fold (InterPro:IPR016024), Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain (InterPro:IPR015873), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: structural molecules (TAIR:AT2G16200.1); Has 1647 Blast hits to 1638 proteins in 222 species: Archae - 2; Bacteria - 2; Metazoa - 707; Fungi - 446; Plants - 176; Viruses - 0; Other Eukaryotes - 314 (source: NCBI BLink). & (gnl|cdd|36294 : 1153.0) no description available & (gnl|cdd|34837 : 638.0) no description available & (reliability: 2990.0) & (original description: Putative copG, Description = Coatomer subunit gamma, PFAM = PF01602;PF16381;PF08752)' T '31.4' 'cell.vesicle transport' 'niben101scf01025_1287636-1297307' '(at5g59420 : 703.0) OSBP(oxysterol binding protein)-related protein 3C (ORP3C); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein, conserved site (InterPro:IPR018494), Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 3B (TAIR:AT3G09300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36948 : 449.0) no description available & (gnl|cdd|85327 : 187.0) no description available & (reliability: 1406.0) & (original description: Putative ORP3A, Description = Oxysterol-binding protein-related protein 3A, PFAM = PF01237)' T '31.4' 'cell.vesicle transport' 'niben101scf01053_129397-169023' '(at1g60070 : 1258.0) Adaptor protein complex AP-1, gamma subunit; FUNCTIONS IN: protein transporter activity, clathrin binding, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, Golgi apparatus part, Golgi apparatus, clathrin adaptor complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adaptor protein complex AP-1, gamma subunit (InterPro:IPR017107), Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Armadillo-like helical (InterPro:IPR011989), Clathrin adaptor, gamma-adaptin, appendage (InterPro:IPR008153), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: gamma-adaptin 1 (TAIR:AT1G23900.2). & (gnl|cdd|36280 : 1033.0) no description available & (gnl|cdd|85562 : 431.0) no description available & (reliability: 2516.0) & (original description: Putative AP1G1, Description = AP-1 complex subunit gamma-1, PFAM = PF02883;PF01602)' T '31.4' 'cell.vesicle transport' 'niben101scf01055_206395-210500' '(at5g13990 : 554.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein C2 (EXO70C2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, exocyst; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein C1 (TAIR:AT5G13150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37555 : 463.0) no description available & (gnl|cdd|86233 : 352.0) no description available & (reliability: 1108.0) & (original description: Putative EXO70C2, Description = Exocyst subunit exo70 family protein C2, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'niben101scf01143_1264720-1268639' '(at5g61010 : 476.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein E2 (EXO70E2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, exocyst; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein E1 (TAIR:AT3G29400.1); Has 800 Blast hits to 794 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 141; Fungi - 13; Plants - 637; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|37555 : 397.0) no description available & (gnl|cdd|86233 : 286.0) no description available & (reliability: 874.0) & (original description: Putative EXO70E2, Description = AT5G61010 protein, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'niben101scf01147_334067-365887' '(at1g79830 : 604.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC5 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (139 aa) portion of the protein. The C-terminal portion of the protein can also specifically interact with two members of the Rab family of GTPases (RabH1b and RabH1c).; golgin candidate 5 (GC5); FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TATA element modulatory factor 1 DNA binding (InterPro:IPR022092), TATA element modulatory factor 1 TATA binding (InterPro:IPR022091). & (gnl|cdd|39872 : 384.0) no description available & (reliability: 1208.0) & (original description: Putative SIP25, Description = SKIP interacting protein 25, PFAM = PF12325;PF12329)' T '31.4' 'cell.vesicle transport' 'niben101scf01190_388691-420955' '(at4g34660 : 502.0) SH3 domain-containing protein; FUNCTIONS IN: clathrin binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Src homology-3 domain (InterPro:IPR001452); BEST Arabidopsis thaliana protein match is: SH3 domain-containing protein (TAIR:AT4G18060.1). & (reliability: 1004.0) & (original description: Putative SH3P2, Description = SH3 domain-containing protein 2, PFAM = PF14604)' T '31.4' 'cell.vesicle transport' 'niben101scf01200_270038-283740' '(at3g11130 : 3033.0) Clathrin, heavy chain; FUNCTIONS IN: structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Clathrin, heavy chain (InterPro:IPR016341), Clathrin, heavy chain, linker/propeller domain (InterPro:IPR016025), Tetratricopeptide-like helical (InterPro:IPR011990), Clathrin, heavy chain, propeller, N-terminal (InterPro:IPR001473), Clathrin, heavy chain, linker, core motif (InterPro:IPR015348), Clathrin, heavy chain, propeller repeat (InterPro:IPR022365), Armadillo-type fold (InterPro:IPR016024), Clathrin, heavy chain/VPS, 7-fold repeat (InterPro:IPR000547); BEST Arabidopsis thaliana protein match is: Clathrin, heavy chain (TAIR:AT3G08530.1); Has 1621 Blast hits to 1503 proteins in 495 species: Archae - 0; Bacteria - 35; Metazoa - 935; Fungi - 178; Plants - 133; Viruses - 0; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|36203 : 2699.0) no description available & (gnl|cdd|47627 : 119.0) no description available & (reliability: 6066.0) & (original description: Putative CHC2, Description = Clathrin heavy chain 2, PFAM = PF13838;PF00637;PF00637;PF00637;PF00637;PF00637;PF00637;PF00637;PF09268;PF01394;PF01394)' T '31.4' 'cell.vesicle transport' 'niben101scf01220_17775-22569' '(at2g32670 : 365.0) member of Synaptobrevin -like protein family; vesicle-associated membrane protein 725 (VAMP725); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: endosome, plasma membrane, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 726 (TAIR:AT1G04760.1); Has 2451 Blast hits to 2449 proteins in 264 species: Archae - 0; Bacteria - 0; Metazoa - 984; Fungi - 445; Plants - 609; Viruses - 0; Other Eukaryotes - 413 (source: NCBI BLink). & (gnl|cdd|36077 : 342.0) no description available & (gnl|cdd|85150 : 102.0) no description available & (reliability: 730.0) & (original description: Putative VAMP726, Description = Putative vesicle-associated membrane protein 726, PFAM = PF13774;PF00957)' T '31.4' 'cell.vesicle transport' 'niben101scf01236_148151-157694' '(at3g17440 : 386.0) member of NPSN Gene Family; novel plant snare 13 (NPSN13); FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: novel plant snare 12 (TAIR:AT1G48240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 772.0) & (original description: Putative NPSN13, Description = Novel plant SNARE 13, PFAM = PF03908)' T '31.4' 'cell.vesicle transport' 'niben101scf01237_148787-164750' '(at3g11130 : 3045.0) Clathrin, heavy chain; FUNCTIONS IN: structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Clathrin, heavy chain (InterPro:IPR016341), Clathrin, heavy chain, linker/propeller domain (InterPro:IPR016025), Tetratricopeptide-like helical (InterPro:IPR011990), Clathrin, heavy chain, propeller, N-terminal (InterPro:IPR001473), Clathrin, heavy chain, linker, core motif (InterPro:IPR015348), Clathrin, heavy chain, propeller repeat (InterPro:IPR022365), Armadillo-type fold (InterPro:IPR016024), Clathrin, heavy chain/VPS, 7-fold repeat (InterPro:IPR000547); BEST Arabidopsis thaliana protein match is: Clathrin, heavy chain (TAIR:AT3G08530.1); Has 1621 Blast hits to 1503 proteins in 495 species: Archae - 0; Bacteria - 35; Metazoa - 935; Fungi - 178; Plants - 133; Viruses - 0; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|36203 : 2688.0) no description available & (gnl|cdd|47627 : 119.0) no description available & (reliability: 6090.0) & (original description: Putative CHC2, Description = Clathrin heavy chain 2, PFAM = PF00637;PF00637;PF00637;PF00637;PF00637;PF00637;PF00637;PF01394;PF01394;PF09268;PF13838)' T '31.4' 'cell.vesicle transport' 'niben101scf01319_154134-162746' '(at1g47830 : 240.0) SNARE-like superfamily protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, transport, protein transport; LOCATED IN: clathrin vesicle coat; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Adaptor protein complex, sigma subunit (InterPro:IPR016635), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complex small chain family protein (TAIR:AT4G35410.2); Has 1794 Blast hits to 1793 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 780; Fungi - 421; Plants - 260; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink). & (o50016|ap2s1_maize : 223.0) AP-2 complex subunit sigma-1 (Clathrin coat assembly protein AP17) (Clathrin coat-associated protein AP17) (Plasma membrane adaptor AP-2 17 kDa protein) (Clathrin assembly protein 2 small chain) - Zea mays (Maize) & (gnl|cdd|36153 : 205.0) no description available & (gnl|cdd|34635 : 167.0) no description available & (reliability: 480.0) & (original description: Putative AP17, Description = AP-2 complex subunit sigma, PFAM = PF01217)' T '31.4' 'cell.vesicle transport' 'niben101scf01328_247096-261420' '(at1g67930 : 900.0) Golgi transport complex protein-related; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved oligomeric Golgi complex, subunit 5 (InterPro:IPR019465); Has 4471 Blast hits to 590 proteins in 146 species: Archae - 0; Bacteria - 79; Metazoa - 393; Fungi - 221; Plants - 65; Viruses - 7; Other Eukaryotes - 3706 (source: NCBI BLink). & (gnl|cdd|37422 : 645.0) no description available & (reliability: 1800.0) & (original description: Putative BnaA07g26710D, Description = BnaA07g26710D protein, PFAM = PF10392)' T '31.4' 'cell.vesicle transport' 'niben101scf01388_181614-190243' '(at4g34660 : 306.0) SH3 domain-containing protein; FUNCTIONS IN: clathrin binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Src homology-3 domain (InterPro:IPR001452); BEST Arabidopsis thaliana protein match is: SH3 domain-containing protein (TAIR:AT4G18060.1). & (reliability: 612.0) & (original description: Putative Sb01g040020, Description = Putative uncharacterized protein Sb01g040020, PFAM = PF14604)' T '31.4' 'cell.vesicle transport' 'niben101scf01429_112451-117360' '(at3g11820 : 365.0) Encodes a syntaxin localized at the plasma membrane (SYR1, Syntaxin Related Protein 1, also known as SYP121, PENETRATION1/PEN1). SYR1/PEN1 is a member of the SNARE superfamily proteins. SNARE proteins are involved in cell signaling, vesicle traffic, growth and development. SYR1/PEN1 functions in positioning anchoring of the KAT1 K+ channel protein at the plasma membrane. Transcription is upregulated by abscisic acid, suggesting a role in ABA signaling. Also functions in non-host resistance against barley powdery mildew, Blumeria graminis sp. hordei. SYR1/PEN1 is a nonessential component of the preinvasive resistance against Colletotrichum fungus. Required for mlo resistance.; syntaxin of plants 121 (SYP121); FUNCTIONS IN: protein anchor, SNAP receptor activity; INVOLVED IN: in 13 processes; LOCATED IN: SNARE complex, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 122 (TAIR:AT3G52400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36028 : 257.0) no description available & (gnl|cdd|29141 : 115.0) no description available & (reliability: 730.0) & (original description: Putative SYP121, Description = Syntaxin-121, PFAM = PF05739;PF00804)' T '31.4' 'cell.vesicle transport' 'niben101scf01429_112463-117432' '(at3g11820 : 363.0) Encodes a syntaxin localized at the plasma membrane (SYR1, Syntaxin Related Protein 1, also known as SYP121, PENETRATION1/PEN1). SYR1/PEN1 is a member of the SNARE superfamily proteins. SNARE proteins are involved in cell signaling, vesicle traffic, growth and development. SYR1/PEN1 functions in positioning anchoring of the KAT1 K+ channel protein at the plasma membrane. Transcription is upregulated by abscisic acid, suggesting a role in ABA signaling. Also functions in non-host resistance against barley powdery mildew, Blumeria graminis sp. hordei. SYR1/PEN1 is a nonessential component of the preinvasive resistance against Colletotrichum fungus. Required for mlo resistance.; syntaxin of plants 121 (SYP121); FUNCTIONS IN: protein anchor, SNAP receptor activity; INVOLVED IN: in 13 processes; LOCATED IN: SNARE complex, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 122 (TAIR:AT3G52400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36028 : 264.0) no description available & (gnl|cdd|29141 : 116.0) no description available & (reliability: 726.0) & (original description: Putative SYP121, Description = Syntaxin-121, PFAM = PF05739;PF00804)' T '31.4' 'cell.vesicle transport' 'niben101scf01441_217861-222260' '(at4g02350 : 1118.0) Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.; exocyst complex component sec15B (SEC15B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen germination, pollen tube growth; LOCATED IN: cytosol, plasma membrane, membrane, exocyst; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exocyst complex subunit Sec15-like (InterPro:IPR007225); BEST Arabidopsis thaliana protein match is: exocyst complex component sec15A (TAIR:AT3G56640.1); Has 431 Blast hits to 427 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 167; Fungi - 138; Plants - 91; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|37387 : 784.0) no description available & (gnl|cdd|67697 : 130.0) no description available & (reliability: 2236.0) & (original description: Putative SEC15B, Description = Exocyst complex component SEC15B, PFAM = PF04091)' T '31.4' 'cell.vesicle transport' 'niben101scf01447_210029-221018' '(at1g15880 : 297.0) Golgi SNARE 11 protein (GOS11); golgi snare 11 (GOS11); BEST Arabidopsis thaliana protein match is: golgi snare 12 (TAIR:AT2G45200.1); Has 412 Blast hits to 412 proteins in 171 species: Archae - 0; Bacteria - 0; Metazoa - 161; Fungi - 123; Plants - 99; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|38418 : 190.0) no description available & (gnl|cdd|68577 : 93.9) no description available & (reliability: 594.0) & (original description: Putative GOS11, Description = Golgi SNAP receptor complex member 1-1, PFAM = PF12352;PF10548)' T '31.4' 'cell.vesicle transport' 'niben101scf01517_888435-897954' '(at1g67930 : 902.0) Golgi transport complex protein-related; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved oligomeric Golgi complex, subunit 5 (InterPro:IPR019465); Has 4471 Blast hits to 590 proteins in 146 species: Archae - 0; Bacteria - 79; Metazoa - 393; Fungi - 221; Plants - 65; Viruses - 7; Other Eukaryotes - 3706 (source: NCBI BLink). & (gnl|cdd|37422 : 653.0) no description available & (reliability: 1804.0) & (original description: Putative BnaA07g26710D, Description = BnaA07g26710D protein, PFAM = PF10392)' T '31.4' 'cell.vesicle transport' 'niben101scf01529_121984-128706' '(at4g21450 : 320.0) PapD-like superfamily protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535); BEST Arabidopsis thaliana protein match is: PapD-like superfamily protein (TAIR:AT4G05060.1). & (gnl|cdd|35660 : 101.0) no description available & (gnl|cdd|84916 : 88.5) no description available & (reliability: 640.0) & (original description: Putative PVA42, Description = Vesicle-associated protein 4-2, PFAM = PF00635)' T '31.4' 'cell.vesicle transport' 'niben101scf01549_3777-11745' '(at4g21450 : 277.0) PapD-like superfamily protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535); BEST Arabidopsis thaliana protein match is: PapD-like superfamily protein (TAIR:AT4G05060.1). & (gnl|cdd|35660 : 93.8) no description available & (gnl|cdd|84916 : 84.7) no description available & (reliability: 554.0) & (original description: Putative MAMI, Description = Vesicle-associated protein 4-2, PFAM = PF00635)' T '31.4' 'cell.vesicle transport' 'niben101scf01557_46082-69553' '(at5g22770 : 1613.0) alpha-adaptin (alpha-ADR); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: male gametophyte, pollen tube, leaf; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Adaptor protein complex AP-2, alpha subunit (InterPro:IPR017104), Armadillo-like helical (InterPro:IPR011989), Clathrin adaptor, alpha-adaptin, appendage, Ig-like subdomain (InterPro:IPR013038), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Clathrin adaptor, alpha-adaptin, appendage, C-terminal subdomain (InterPro:IPR003164), Armadillo-type fold (InterPro:IPR016024), Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain (InterPro:IPR015873), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: Adaptor protein complex AP-2, alpha subunit (TAIR:AT5G22780.1); Has 2529 Blast hits to 2470 proteins in 297 species: Archae - 0; Bacteria - 0; Metazoa - 987; Fungi - 687; Plants - 265; Viruses - 0; Other Eukaryotes - 590 (source: NCBI BLink). & (gnl|cdd|36293 : 1148.0) no description available & (gnl|cdd|85562 : 319.0) no description available & (reliability: 3226.0) & (original description: Putative AP2A, Description = Adaptor protein complex 2 subunit alpha, PFAM = PF02883;PF02296;PF01602)' T '31.4' 'cell.vesicle transport' 'niben101scf01745_409084-428078' '(at2g35190 : 337.0) plant-specific SNARE located in cell plate of dividing cells. cofractionates with the cytokinesis-specific syntaxin, KNOLLE, which is required for the formation of the cell plate.; novel plant snare 11 (NPSN11); FUNCTIONS IN: protein transporter activity, SNAP receptor activity; INVOLVED IN: cytokinesis; LOCATED IN: plasma membrane, cell plate; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), Sec20 (InterPro:IPR005606); BEST Arabidopsis thaliana protein match is: novel plant snare 13 (TAIR:AT3G17440.1); Has 871 Blast hits to 814 proteins in 236 species: Archae - 12; Bacteria - 157; Metazoa - 137; Fungi - 78; Plants - 153; Viruses - 0; Other Eukaryotes - 334 (source: NCBI BLink). & (reliability: 674.0) & (original description: Putative NPSN11, Description = Novel plant SNARE 11, PFAM = PF03908)' T '31.4' 'cell.vesicle transport' 'niben101scf01750_1476863-1482728' '(at5g22360 : 390.0) Member of Synaptobrevin-like AtVAMP7C, v-SNARE protein family.; vesicle-associated membrane protein 714 (VAMP714); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: Golgi apparatus, vacuole, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 713 (TAIR:AT5G11150.1); Has 2317 Blast hits to 2315 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 867; Fungi - 487; Plants - 553; Viruses - 0; Other Eukaryotes - 410 (source: NCBI BLink). & (gnl|cdd|36077 : 313.0) no description available & (gnl|cdd|85150 : 99.5) no description available & (reliability: 780.0) & (original description: Putative VAMP714, Description = Vesicle-associated membrane protein 714, PFAM = PF13774;PF00957)' T '31.4' 'cell.vesicle transport' 'niben101scf01756_298175-327105' '(at2g46180 : 405.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC4 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (169 aa) portion of the protein.; golgin candidate 4 (GC4); BEST Arabidopsis thaliana protein match is: GRIP-related ARF-binding domain-containing protein 1 (TAIR:AT3G61570.1); Has 144775 Blast hits to 78736 proteins in 3164 species: Archae - 1753; Bacteria - 23936; Metazoa - 62600; Fungi - 12453; Plants - 7734; Viruses - 519; Other Eukaryotes - 35780 (source: NCBI BLink). & (reliability: 810.0) & (original description: Putative GC4, Description = Golgin candidate 4, PFAM = )' T '31.4' 'cell.vesicle transport' 'niben101scf01785_525012-530943' '(at1g60970 : 237.0) SNARE-like superfamily protein; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: clathrin vesicle coat; EXPRESSED IN: leaf whorl, sperm cell, pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT3G09800.1); Has 621 Blast hits to 621 proteins in 219 species: Archae - 0; Bacteria - 0; Metazoa - 227; Fungi - 139; Plants - 149; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|38553 : 210.0) no description available & (gnl|cdd|35100 : 93.9) no description available & (reliability: 450.0) & (original description: Putative COPZ2, Description = Coatomer subunit zeta-2, PFAM = PF01217)' T '31.4' 'cell.vesicle transport' 'niben101scf01826_134772-138852' '(at5g50380 : 684.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein F1 (EXO70F1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: plasma membrane, exocyst; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein D3 (TAIR:AT3G14090.1); Has 952 Blast hits to 944 proteins in 146 species: Archae - 0; Bacteria - 2; Metazoa - 140; Fungi - 117; Plants - 671; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|37555 : 545.0) no description available & (gnl|cdd|86233 : 422.0) no description available & (reliability: 1368.0) & (original description: Putative EXO70F1, Description = Exocyst subunit exo70 family protein F1, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'niben101scf01919_232738-240074' '(at4g21450 : 270.0) PapD-like superfamily protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535); BEST Arabidopsis thaliana protein match is: PapD-like superfamily protein (TAIR:AT4G05060.1). & (gnl|cdd|35660 : 92.6) no description available & (gnl|cdd|84916 : 81.2) no description available & (reliability: 540.0) & (original description: Putative MAMI, Description = Vesicle-associated protein 4-2, PFAM = PF00635)' T '31.4' 'cell.vesicle transport' 'niben101scf01926_504252-571432' '(at5g08080 : 249.0) member of SYP13 Gene Family; syntaxin of plants 132 (SYP132); CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 131 (TAIR:AT3G03800.1). & (gnl|cdd|36028 : 225.0) no description available & (gnl|cdd|29141 : 101.0) no description available & (reliability: 498.0) & (original description: Putative SYP131, Description = Putative syntaxin-131, PFAM = PF00804;PF05739)' T '31.4' 'cell.vesicle transport' 'niben101scf02030_197612-210149' '(at1g52360 : 1561.0) Coatomer, beta' subunit; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 (InterPro:IPR011048), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Coatomer, beta' subunit (InterPro:IPR016453), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, beta' subunit (TAIR:AT3G15980.3). & (gnl|cdd|35497 : 1330.0) no description available & (gnl|cdd|67661 : 540.0) no description available & (p93107|pf20_chlre : 90.9) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 3122.0) & (original description: Putative copB2, Description = Coatomer subunit beta, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF04053)' T '31.4' 'cell.vesicle transport' 'niben101scf02069_71723-84906' '(at1g64350 : 385.0) seh1-like protein; SEH1H; FUNCTIONS IN: nucleotide binding; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT2G30050.1); Has 1315 Blast hits to 1213 proteins in 251 species: Archae - 0; Bacteria - 230; Metazoa - 335; Fungi - 407; Plants - 224; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (gnl|cdd|37656 : 273.0) no description available & (reliability: 770.0) & (original description: Putative SEH1, Description = Protein SEH1, PFAM = PF00400)' T '31.4' 'cell.vesicle transport' 'niben101scf02156_897046-920901' '(at1g04750 : 335.0) vesicle-associated membrane protein 7B (At VAMP7B) mRNA,; vesicle-associated membrane protein 721 (VAMP721); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: endosome, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: synaptobrevin-related protein 1 (TAIR:AT2G33120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36077 : 329.0) no description available & (gnl|cdd|85150 : 101.0) no description available & (reliability: 670.0) & (original description: Putative vamp72, Description = Putative uncharacterized protein vamp72, PFAM = PF13774;PF00957)' T '31.4' 'cell.vesicle transport' 'niben101scf02172_207085-212336' '(at5g61210 : 294.0) membrane localized t-SNARE SNAP25 homologue, probably involved in cytokinesis and cell plate formation; soluble N-ethylmaleimide-sensitive factor adaptor protein 33 (SNAP33); FUNCTIONS IN: protein binding, SNAP receptor activity; INVOLVED IN: vesicle-mediated transport, response to other organism, cellular membrane fusion, response to mechanical stimulus, cytokinesis by cell plate formation; LOCATED IN: integral to membrane of membrane fraction, plasma membrane, chloroplast, cell plate; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNAP-25 (InterPro:IPR000928), Target SNARE coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: soluble N-ethylmaleimide-sensitive factor adaptor protein 30 (TAIR:AT1G13890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38275 : 169.0) no description available & (reliability: 588.0) & (original description: Putative SNAP33, Description = SNAP25 homologous protein SNAP33, PFAM = )' T '31.4' 'cell.vesicle transport' 'niben101scf02192_147782-160995' '(at3g24350 : 278.0) member of Glycoside Hydrolase Family 17; syntaxin of plants 32 (SYP32); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: intracellular protein transport, cellular membrane fusion; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), t-SNARE (InterPro:IPR010989), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 31 (TAIR:AT5G05760.1). & (gnl|cdd|36030 : 252.0) no description available & (reliability: 556.0) & (original description: Putative SYP32, Description = Syntaxin-32, PFAM = PF11416;PF05739)' T '31.4' 'cell.vesicle transport' 'niben101scf02289_937746-941871' '(at3g29400 : 554.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein E1 (EXO70E1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein E2 (TAIR:AT5G61010.2); Has 880 Blast hits to 870 proteins in 128 species: Archae - 0; Bacteria - 0; Metazoa - 137; Fungi - 86; Plants - 636; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|37555 : 488.0) no description available & (gnl|cdd|86233 : 348.0) no description available & (reliability: 1108.0) & (original description: Putative EXO70E1, Description = Exocyst subunit exo70 family protein E1, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'niben101scf02319_647039-671379' '(at5g11490 : 1303.0) adaptin family protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, beta-adaptin, appendage, C-terminal subdomain (InterPro:IPR015151), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Adaptor protein complex, beta subunit (InterPro:IPR016342), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: Adaptin family protein (TAIR:AT4G23460.1). & (gnl|cdd|36279 : 658.0) no description available & (gnl|cdd|85562 : 270.0) no description available & (reliability: 2606.0) & (original description: Putative 16817, Description = Beta-adaptin-like protein, PFAM = PF09066;PF01602)' T '31.4' 'cell.vesicle transport' 'niben101scf02354_1373165-1393564' '(at4g32760 : 490.0) ENTH/VHS/GAT family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), GAT (InterPro:IPR004152), VHS subgroup (InterPro:IPR018205), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS/GAT family protein (TAIR:AT3G08790.1). & (gnl|cdd|36303 : 344.0) no description available & (gnl|cdd|48658 : 177.0) no description available & (reliability: 980.0) & (original description: Putative Os06g0332400, Description = Os06g0332400 protein, PFAM = PF00790;PF03127)' T '31.4' 'cell.vesicle transport' 'niben101scf02370_173272-184974' '(at5g05760 : 265.0) A SNARE protein (ortholog of syntaxin 5), a membrane fusion machine component involved in cytokinesis; syntaxin of plants 31 (SYP31); CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 32 (TAIR:AT3G24350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36030 : 215.0) no description available & (reliability: 530.0) & (original description: Putative SYP31, Description = Putative Syntaxin, PFAM = PF05739)' T '31.4' 'cell.vesicle transport' 'niben101scf02445_1174022-1179250' '(gnl|cdd|66892 : 247.0) no description available & (gnl|cdd|36901 : 246.0) no description available & (at4g39220 : 238.0) Key player of retrieval of ER membrane proteins; ATRER1A; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: endoplasmatic reticulum retrieval protein 1B (TAIR:AT2G21600.1); Has 516 Blast hits to 513 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 155; Fungi - 150; Plants - 130; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative RER1C, Description = Protein RER1C, PFAM = PF03248)' T '31.4' 'cell.vesicle transport' 'niben101scf02459_220268-222984' '(at4g10170 : 208.0) SNARE-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT1G33475.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 416.0) & (original description: Putative PHYL1.1, Description = Phytolongin Phyl1.1, PFAM = )' T '31.4' 'cell.vesicle transport' 'niben101scf02569_315273-329738' '(at1g12360 : 981.0) encodes a Sec1 protein and expressed throughout the plant. physically interacts with Syntaxin1 and is required for cytokinesis.; keule (KEU); FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, cytokinesis; LOCATED IN: cytosol, peripheral to membrane of membrane fraction, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: Sec1/munc18-like (SM) proteins superfamily (TAIR:AT4G12120.1); Has 1791 Blast hits to 1770 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 744; Fungi - 510; Plants - 223; Viruses - 0; Other Eukaryotes - 314 (source: NCBI BLink). & (q7xwp3|sec1a_orysa : 876.0) Probable protein transport Sec1a - Oryza sativa (Rice) & (gnl|cdd|36514 : 612.0) no description available & (gnl|cdd|85171 : 293.0) no description available & (reliability: 1962.0) & (original description: Putative KEU, Description = SNARE-interacting protein KEULE, PFAM = PF00995)' T '31.4' 'cell.vesicle transport' 'niben101scf02605_93366-98943' '(at5g54110 : 278.0) Encodes a highly polar protein with more than 60% hydrophilic amino acid residues that is associated with the plasma membrane. It has limited secondary structure similarity to VAP-33 from Aplysia, which may be involved in membrane trafficking.; membrane-associated mannitol-induced (MAMI); FUNCTIONS IN: structural molecule activity; INVOLVED IN: response to osmotic stress; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535); BEST Arabidopsis thaliana protein match is: PapD-like superfamily protein (TAIR:AT4G21450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35660 : 93.0) no description available & (gnl|cdd|84916 : 80.0) no description available & (reliability: 556.0) & (original description: Putative PVA41, Description = Vesicle-associated protein 4-1, PFAM = PF00635;PF00635)' T '31.4' 'cell.vesicle transport' 'niben101scf02626_248623-254700' '(at4g15780 : 338.0) member of VAMP72 Gene Family; vesicle-associated membrane protein 724 (VAMP724); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 726 (TAIR:AT1G04760.1); Has 2208 Blast hits to 2205 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 886; Fungi - 363; Plants - 574; Viruses - 0; Other Eukaryotes - 385 (source: NCBI BLink). & (gnl|cdd|36077 : 293.0) no description available & (gnl|cdd|85150 : 84.1) no description available & (reliability: 676.0) & (original description: Putative VAMP724, Description = Vesicle-associated membrane protein 724, PFAM = PF13774;PF00957)' T '31.4' 'cell.vesicle transport' 'niben101scf02637_43856-71547' '(at1g21380 : 423.0) Target of Myb protein 1; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), Target of Myb protein 1 (InterPro:IPR014645), GAT (InterPro:IPR004152), VHS subgroup (InterPro:IPR018205), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: Target of Myb protein 1 (TAIR:AT1G76970.1); Has 1707 Blast hits to 1699 proteins in 198 species: Archae - 0; Bacteria - 6; Metazoa - 892; Fungi - 452; Plants - 279; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (gnl|cdd|36303 : 300.0) no description available & (gnl|cdd|48658 : 155.0) no description available & (reliability: 846.0) & (original description: Putative TaSAG2, Description = Seed protein B32E, PFAM = PF00790;PF03127)' T '31.4' 'cell.vesicle transport' 'niben101scf02803_58778-90629' '(at3g10380 : 1447.0) Subunit of the Putative Arabidopsis Exocyst Complex; subunit of exocyst complex 8 (SEC8); INVOLVED IN: pollen germination, mucilage biosynthetic process involved in seed coat development, pollen tube growth; LOCATED IN: cytosol, plasma membrane, exocyst; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec8 exocyst complex component specific domain (InterPro:IPR007191); Has 454 Blast hits to 346 proteins in 158 species: Archae - 0; Bacteria - 0; Metazoa - 232; Fungi - 133; Plants - 50; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|38895 : 108.0) no description available & (reliability: 2894.0) & (original description: Putative BnaA01g31810D, Description = BnaA01g31810D protein, PFAM = PF04048)' T '31.4' 'cell.vesicle transport' 'niben101scf02915_877301-890610' '(at1g51740 : 299.0) member of SYP8 Gene Family; syntaxin of plants 81 (SYP81); INVOLVED IN: vesicle-mediated transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: t-SNARE (InterPro:IPR010989), SNARE-complex protein Syntaxin-18 N-terminal (InterPro:IPR019529); Has 429 Blast hits to 426 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 200; Fungi - 82; Plants - 110; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|39097 : 191.0) no description available & (reliability: 598.0) & (original description: Putative SYP8, Description = AtSYP81, PFAM = )' T '31.4' 'cell.vesicle transport' 'niben101scf02920_94097-97418' '(at1g61290 : 384.0) member of SYP12 Gene Family; syntaxin of plants 124 (SYP124); CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 125 (TAIR:AT1G11250.1); Has 2975 Blast hits to 2948 proteins in 317 species: Archae - 21; Bacteria - 77; Metazoa - 1321; Fungi - 552; Plants - 504; Viruses - 0; Other Eukaryotes - 500 (source: NCBI BLink). & (gnl|cdd|36028 : 257.0) no description available & (gnl|cdd|29141 : 115.0) no description available & (reliability: 768.0) & (original description: Putative SYP124, Description = Syntaxin-124, PFAM = PF05739;PF00804)' T '31.4' 'cell.vesicle transport' 'niben101scf02922_23780-28110' '(at5g61210 : 306.0) membrane localized t-SNARE SNAP25 homologue, probably involved in cytokinesis and cell plate formation; soluble N-ethylmaleimide-sensitive factor adaptor protein 33 (SNAP33); FUNCTIONS IN: protein binding, SNAP receptor activity; INVOLVED IN: vesicle-mediated transport, response to other organism, cellular membrane fusion, response to mechanical stimulus, cytokinesis by cell plate formation; LOCATED IN: integral to membrane of membrane fraction, plasma membrane, chloroplast, cell plate; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNAP-25 (InterPro:IPR000928), Target SNARE coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: soluble N-ethylmaleimide-sensitive factor adaptor protein 30 (TAIR:AT1G13890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38275 : 184.0) no description available & (reliability: 612.0) & (original description: Putative SNAP33, Description = SNAP25 homologous protein SNAP33, PFAM = )' T '31.4' 'cell.vesicle transport' 'niben101scf02944_275012-282059' '(at1g28490 : 271.0) Encodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed.; syntaxin of plants 61 (SYP61); CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin 6, N-terminal (InterPro:IPR015260); BEST Arabidopsis thaliana protein match is: syntaxin of plants 52 (TAIR:AT1G79590.2); Has 786 Blast hits to 786 proteins in 195 species: Archae - 0; Bacteria - 4; Metazoa - 244; Fungi - 238; Plants - 166; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink). & (gnl|cdd|38412 : 144.0) no description available & (gnl|cdd|87826 : 108.0) no description available & (reliability: 542.0) & (original description: Putative SYP61, Description = Syntaxin-61, PFAM = PF05739;PF09177)' T '31.4' 'cell.vesicle transport' 'niben101scf02947_381760-389129' '(at2g17380 : 295.0) Encodes clathrin assembly protein AP19.; associated protein 19 (AP19); FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, mitochondrion, clathrin vesicle coat, clathrin coat of trans-Golgi network vesicle, clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor AP1, sigma subunit (InterPro:IPR015604), Adaptor protein complex, sigma subunit (InterPro:IPR016635), Clathrin adaptor, sigma subunit/coatomer, zeta subunit (InterPro:IPR000804), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complex small chain family protein (TAIR:AT4G35410.2); Has 1854 Blast hits to 1853 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 748; Fungi - 497; Plants - 257; Viruses - 0; Other Eukaryotes - 352 (source: NCBI BLink). & (gnl|cdd|36152 : 210.0) no description available & (gnl|cdd|34635 : 186.0) no description available & (o50016|ap2s1_maize : 150.0) AP-2 complex subunit sigma-1 (Clathrin coat assembly protein AP17) (Clathrin coat-associated protein AP17) (Plasma membrane adaptor AP-2 17 kDa protein) (Clathrin assembly protein 2 small chain) - Zea mays (Maize) & (reliability: 590.0) & (original description: Putative ap1, Description = AP-1 complex subunit sigma-2, PFAM = PF01217)' T '31.4' 'cell.vesicle transport' 'niben101scf02949_444583-452381' '(at1g13170 : 1026.0) OSBP(oxysterol binding protein)-related protein 1D (ORP1D); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Pleckstrin homology (InterPro:IPR001849), Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 1C (TAIR:AT4G08180.1). & (gnl|cdd|36948 : 579.0) no description available & (gnl|cdd|85327 : 227.0) no description available & (reliability: 2052.0) & (original description: Putative ORP1A, Description = Oxysterol-binding protein-related protein 1A, PFAM = PF15413;PF01237)' T '31.4' 'cell.vesicle transport' 'niben101scf02971_136863-139873' '(at1g17140 : 167.0) Encodes a ROP/RAC effector, designated interactor of constitutive active ROPs 1 (ICR1), that interacts with GTP-bound ROPs. ICR1 is a scaffold mediating formation of protein complexes that are required for cell polarity. ICR1 is comprised of coiled-coil domains and forms complexes with itself and the exocyst vesicle-tethering complex subunit SEC3.; interactor of constitutive active rops 1 (ICR1); BEST Arabidopsis thaliana protein match is: ROP interactive partner 2 (TAIR:AT1G78430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative ICR1, Description = Interactor of constitutive active ROPs 1, PFAM = )' T '31.4' 'cell.vesicle transport' 'niben101scf02996_245805-249559' '(at5g13150 : 535.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein C1 (EXO70C1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein C2 (TAIR:AT5G13990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37555 : 443.0) no description available & (gnl|cdd|86233 : 342.0) no description available & (reliability: 1044.0) & (original description: Putative BnaA03g04210D, Description = BnaA03g04210D protein, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'niben101scf03000_32122-38212' '(at2g36900 : 235.0) member of Membrin Gene Family; membrin 11 (MEMB11); BEST Arabidopsis thaliana protein match is: membrin 12 (TAIR:AT5G50440.1); Has 361 Blast hits to 361 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 72; Plants - 103; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|38461 : 172.0) no description available & (gnl|cdd|68577 : 96.9) no description available & (reliability: 470.0) & (original description: Putative MEMB11, Description = Membrin-11, PFAM = PF12352)' T '31.4' 'cell.vesicle transport' 'niben101scf03107_63707-75290' '(at1g16240 : 292.0) Encodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed.; syntaxin of plants 51 (SYP51); CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012); BEST Arabidopsis thaliana protein match is: syntaxin of plants 52 (TAIR:AT1G79590.2); Has 550 Blast hits to 550 proteins in 163 species: Archae - 0; Bacteria - 4; Metazoa - 169; Fungi - 163; Plants - 161; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|38412 : 199.0) no description available & (reliability: 584.0) & (original description: Putative SYP51, Description = Syntaxin-51, PFAM = PF05739)' T '31.4' 'cell.vesicle transport' 'niben101scf03116_259235-263205' '(at3g29400 : 562.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein E1 (EXO70E1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein E2 (TAIR:AT5G61010.2); Has 880 Blast hits to 870 proteins in 128 species: Archae - 0; Bacteria - 0; Metazoa - 137; Fungi - 86; Plants - 636; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|37555 : 492.0) no description available & (gnl|cdd|86233 : 363.0) no description available & (reliability: 1124.0) & (original description: Putative EXO70E1, Description = Exocyst subunit exo70 family protein E1, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'niben101scf03239_570719-588271' '(at2g46180 : 365.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC4 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (169 aa) portion of the protein.; golgin candidate 4 (GC4); BEST Arabidopsis thaliana protein match is: GRIP-related ARF-binding domain-containing protein 1 (TAIR:AT3G61570.1); Has 144775 Blast hits to 78736 proteins in 3164 species: Archae - 1753; Bacteria - 23936; Metazoa - 62600; Fungi - 12453; Plants - 7734; Viruses - 519; Other Eukaryotes - 35780 (source: NCBI BLink). & (reliability: 730.0) & (original description: Putative GC4, Description = Golgin candidate 4, PFAM = )' T '31.4' 'cell.vesicle transport' 'niben101scf03326_152892-167347' '(at5g16880 : 481.0) Target of Myb protein 1; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), GAT (InterPro:IPR004152), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS/GAT family protein (TAIR:AT1G06210.1); Has 1482 Blast hits to 1482 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 785; Fungi - 378; Plants - 250; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|36303 : 227.0) no description available & (gnl|cdd|48658 : 134.0) no description available & (reliability: 962.0) & (original description: Putative MYB9, Description = MYB transcription factor 9, PFAM = PF03127;PF00790)' T '31.4' 'cell.vesicle transport' 'niben101scf03351_381973-393049' '(at5g09260 : 195.0) vacuolar protein sorting-associated protein 20.2 (VPS20.2); INVOLVED IN: vesicle-mediated transport, N-terminal protein myristoylation; LOCATED IN: ESCRT III complex, plasma membrane; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT5G63880.1); Has 1828 Blast hits to 1807 proteins in 295 species: Archae - 35; Bacteria - 99; Metazoa - 731; Fungi - 367; Plants - 251; Viruses - 5; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|38121 : 185.0) no description available & (gnl|cdd|86302 : 99.5) no description available & (reliability: 390.0) & (original description: Putative chmp6, Description = Charged multivesicular body protein 6, PFAM = PF03357)' T '31.4' 'cell.vesicle transport' 'niben101scf03377_645769-678141' '(at5g03540 : 933.0) AtEXO70A1 is a member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into nine clusters on the phylogenetic tree; exocyst subunit exo70 family protein A1 (EXO70A1); CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein A2 (TAIR:AT5G52340.1). & (gnl|cdd|37555 : 543.0) no description available & (gnl|cdd|86233 : 396.0) no description available & (reliability: 1866.0) & (original description: Putative EXO70A1, Description = Exocyst complex component EXO70A1, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'niben101scf03504_239818-247064' '(at5g52340 : 897.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein A2 (EXO70A2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein A1 (TAIR:AT5G03540.1); Has 1037 Blast hits to 968 proteins in 158 species: Archae - 0; Bacteria - 0; Metazoa - 201; Fungi - 140; Plants - 668; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|37555 : 533.0) no description available & (gnl|cdd|86233 : 393.0) no description available & (reliability: 1794.0) & (original description: Putative BnaA02g10960D, Description = BnaA02g10960D protein, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'niben101scf03504_633809-642017' '(at4g31480 : 1533.0) Coatomer, beta subunit; FUNCTIONS IN: clathrin binding, structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: male gametophyte, guard cell; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Coatomer, beta subunit, C-terminal (InterPro:IPR011710), Armadillo-like helical (InterPro:IPR011989), Coatomer, beta subunit (InterPro:IPR016460), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: Coatomer, beta subunit (TAIR:AT4G31490.1). & (gnl|cdd|36276 : 1200.0) no description available & (gnl|cdd|71159 : 356.0) no description available & (reliability: 3066.0) & (original description: Putative bCOP, Description = Beta-coat protein, PFAM = PF14806;PF01602;PF07718)' T '31.4' 'cell.vesicle transport' 'niben101scf03532_139392-143535' '(gnl|cdd|37555 : 499.0) no description available & (gnl|cdd|86233 : 494.0) no description available & (at3g55150 : 437.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H1 (EXO70H1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, exocyst; EXPRESSED IN: sperm cell, root, pollen tube; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H2 (TAIR:AT2G39380.1); Has 814 Blast hits to 800 proteins in 89 species: Archae - 0; Bacteria - 0; Metazoa - 134; Fungi - 34; Plants - 631; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 842.0) & (original description: Putative EXO70H7, Description = AT5g59730/mth12_130, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'niben101scf03602_312387-317223' '(gnl|cdd|36901 : 260.0) no description available & (gnl|cdd|66892 : 259.0) no description available & (at4g39220 : 256.0) Key player of retrieval of ER membrane proteins; ATRER1A; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: endoplasmatic reticulum retrieval protein 1B (TAIR:AT2G21600.1); Has 516 Blast hits to 513 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 155; Fungi - 150; Plants - 130; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 512.0) & (original description: Putative RER1A, Description = Protein RER1A, PFAM = PF03248)' T '31.4' 'cell.vesicle transport' 'niben101scf03710_1004782-1015661' '(at4g12780 : 159.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G12770.1). & (gnl|cdd|35652 : 148.0) no description available & (reliability: 318.0) & (original description: Putative AUL1, Description = Auxilin-related protein 2, PFAM = )' T '31.4' 'cell.vesicle transport' 'niben101scf03736_310147-321090' '(at4g08180 : 855.0) OSBP(oxysterol binding protein)-related protein 1C (ORP1C); FUNCTIONS IN: phosphoinositide binding, oxysterol binding; INVOLVED IN: steroid metabolic process, signal transduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Oxysterol-binding protein (InterPro:IPR000648), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 1A (TAIR:AT2G31020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36948 : 593.0) no description available & (gnl|cdd|85327 : 229.0) no description available & (reliability: 1710.0) & (original description: Putative ORP1C, Description = Oxysterol-binding protein-related protein 1C, PFAM = PF15413;PF01237)' T '31.4' 'cell.vesicle transport' 'niben101scf03778_228061-230606' '(at1g55190 : 188.0) PRA7; INVOLVED IN: vesicle-mediated transport; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: PRA1 (Prenylated rab acceptor) family protein (TAIR:AT3G13720.1); Has 523 Blast hits to 523 proteins in 128 species: Archae - 0; Bacteria - 0; Metazoa - 75; Fungi - 90; Plants - 309; Viruses - 6; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|38352 : 186.0) no description available & (gnl|cdd|86276 : 144.0) no description available & (reliability: 376.0) & (original description: Putative PRA1F2, Description = PRA1 family protein F2, PFAM = PF03208)' T '31.4' 'cell.vesicle transport' 'niben101scf03779_149650-164390' '(at3g11130 : 2783.0) Clathrin, heavy chain; FUNCTIONS IN: structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Clathrin, heavy chain (InterPro:IPR016341), Clathrin, heavy chain, linker/propeller domain (InterPro:IPR016025), Tetratricopeptide-like helical (InterPro:IPR011990), Clathrin, heavy chain, propeller, N-terminal (InterPro:IPR001473), Clathrin, heavy chain, linker, core motif (InterPro:IPR015348), Clathrin, heavy chain, propeller repeat (InterPro:IPR022365), Armadillo-type fold (InterPro:IPR016024), Clathrin, heavy chain/VPS, 7-fold repeat (InterPro:IPR000547); BEST Arabidopsis thaliana protein match is: Clathrin, heavy chain (TAIR:AT3G08530.1); Has 1621 Blast hits to 1503 proteins in 495 species: Archae - 0; Bacteria - 35; Metazoa - 935; Fungi - 178; Plants - 133; Viruses - 0; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|36203 : 2518.0) no description available & (gnl|cdd|47627 : 119.0) no description available & (reliability: 5566.0) & (original description: Putative Chc, Description = Clathrin heavy chain, PFAM = PF09268;PF01394;PF01394;PF13838;PF00637;PF00637;PF00637;PF00637;PF00637;PF00637;PF00637)' T '31.4' 'cell.vesicle transport' 'niben101scf03949_739736-769901' '(at1g71270 : 1108.0) Encodes a homolog of the yeast Vps52p/SAC2. Involved in pollen tube germination and growth. Located in multiple endomembrane organelles including the golgi. The yeast protein has been shown to be located at the late Golgi and to function in a complex involved in retrograde trafficking of vesicles between the early endosomal compartment and the trans-Golgi network.; POKY POLLEN TUBE (POK); CONTAINS InterPro DOMAIN/s: Vps52/Sac2 (InterPro:IPR007258); BEST Arabidopsis thaliana protein match is: Vps52 / Sac2 family (TAIR:AT1G71300.1); Has 820 Blast hits to 773 proteins in 240 species: Archae - 10; Bacteria - 70; Metazoa - 261; Fungi - 156; Plants - 82; Viruses - 2; Other Eukaryotes - 239 (source: NCBI BLink). & (gnl|cdd|37172 : 794.0) no description available & (gnl|cdd|67733 : 573.0) no description available & (reliability: 2216.0) & (original description: Putative VPS52, Description = Vacuolar protein sorting-associated protein 52 A, PFAM = PF04129)' T '31.4' 'cell.vesicle transport' 'niben101scf03959_100365-107649' '(at3g05000 : 296.0) Transport protein particle (TRAPP) component; CONTAINS InterPro DOMAIN/s: Transport protein particle (TRAPP) component (InterPro:IPR007194); Has 457 Blast hits to 457 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 198; Fungi - 137; Plants - 66; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|38526 : 207.0) no description available & (gnl|cdd|86520 : 149.0) no description available & (reliability: 592.0) & (original description: Putative TRAPPC6B, Description = Trafficking protein particle complex subunit 6B, PFAM = PF04051)' T '31.4' 'cell.vesicle transport' 'niben101scf03963_162898-185002' '(at1g08190 : 1422.0) Might be involved in protein sorting to the vacuole.; vacuolar protein sorting 41 (VPS41); FUNCTIONS IN: binding, nucleotide binding, zinc ion binding; INVOLVED IN: gravitropism, protein targeting to vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type (InterPro:IPR001841), WD40 repeat (InterPro:IPR001680), Vacuolar protein sorting-associated protein 41 (InterPro:IPR016902), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781), Clathrin, heavy chain/VPS, 7-fold repeat (InterPro:IPR000547); Has 13288 Blast hits to 4251 proteins in 360 species: Archae - 4; Bacteria - 340; Metazoa - 7814; Fungi - 1141; Plants - 584; Viruses - 346; Other Eukaryotes - 3059 (source: NCBI BLink). & (gnl|cdd|37277 : 940.0) no description available & (gnl|cdd|47627 : 101.0) no description available & (reliability: 2844.0) & (original description: Putative VPS41, Description = Vacuolar protein sorting-associated protein 41 homolog, PFAM = PF00637)' T '31.4' 'cell.vesicle transport' 'niben101scf03975_78694-93140' '(at5g57240 : 379.0) OSBP(oxysterol binding protein)-related protein 4C (ORP4C); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein, conserved site (InterPro:IPR018494), Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.1); Has 2168 Blast hits to 2165 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 1089; Fungi - 634; Plants - 225; Viruses - 0; Other Eukaryotes - 220 (source: NCBI BLink). & (gnl|cdd|37421 : 256.0) no description available & (gnl|cdd|85327 : 138.0) no description available & (reliability: 758.0) & (original description: Putative ORP4C, Description = Oxysterol-binding protein-related protein 4C, PFAM = PF01237)' T '31.4' 'cell.vesicle transport' 'niben101scf03985_457381-465857' '(at1g64350 : 416.0) seh1-like protein; SEH1H; FUNCTIONS IN: nucleotide binding; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT2G30050.1); Has 1315 Blast hits to 1213 proteins in 251 species: Archae - 0; Bacteria - 230; Metazoa - 335; Fungi - 407; Plants - 224; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (gnl|cdd|37656 : 293.0) no description available & (reliability: 832.0) & (original description: Putative SEH1, Description = Protein SEH1, PFAM = PF00400)' T '31.4' 'cell.vesicle transport' 'niben101scf03993_289868-296945' '(at3g54300 : 429.0) Encodes a member of Synaptobrevin -like protein family. VAMP727 is a R-SNARE and interacts with SYP22/VTI11/SYP51. It is required for trafficking of storage proteins to the protein storage vacuoles (PSV) and also for PSV organization and biogenesis. Loss of function mutations have no phenotype but double mutants with SYP22 are embryo lethal.; vesicle-associated membrane protein 727 (VAMP727); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vacuole organization, protein targeting to vacuole; LOCATED IN: endosome, SNARE complex, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 726 (TAIR:AT1G04760.1); Has 2397 Blast hits to 2395 proteins in 262 species: Archae - 0; Bacteria - 0; Metazoa - 970; Fungi - 430; Plants - 618; Viruses - 0; Other Eukaryotes - 379 (source: NCBI BLink). & (gnl|cdd|36077 : 327.0) no description available & (gnl|cdd|85150 : 109.0) no description available & (reliability: 858.0) & (original description: Putative VAMP727, Description = Vesicle-associated membrane protein 727, PFAM = PF00957;PF13774)' T '31.4' 'cell.vesicle transport' 'niben101scf04131_43368-50693' '(at1g15880 : 308.0) Golgi SNARE 11 protein (GOS11); golgi snare 11 (GOS11); BEST Arabidopsis thaliana protein match is: golgi snare 12 (TAIR:AT2G45200.1); Has 412 Blast hits to 412 proteins in 171 species: Archae - 0; Bacteria - 0; Metazoa - 161; Fungi - 123; Plants - 99; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|38418 : 199.0) no description available & (gnl|cdd|68577 : 98.9) no description available & (reliability: 616.0) & (original description: Putative GOS11, Description = Golgi SNAP receptor complex member 1-1, PFAM = PF12352)' T '31.4' 'cell.vesicle transport' 'niben101scf04146_396823-403990' '(at1g08820 : 203.0) Encodes VAP33-like protein that interacts with cowpea mosaic virus protein 60K. Is a SNARE-like protein that may be involved in vesicular transport to or from the ER.; vamp/synaptobrevin-associated protein 27-2 (VAP27-2); FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular transport; LOCATED IN: plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535); BEST Arabidopsis thaliana protein match is: vesicle associated protein (TAIR:AT3G60600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35660 : 100.0) no description available & (gnl|cdd|84916 : 90.8) no description available & (reliability: 406.0) & (original description: Putative PVA22, Description = Vesicle-associated protein 2-2, PFAM = PF00635)' T '31.4' 'cell.vesicle transport' 'niben101scf04182_467758-504814' '(at3g55480 : 1219.0) protein affected trafficking 2 (PAT2); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, endocytosis, protein transport; LOCATED IN: membrane coat, Golgi apparatus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adaptor protein complex AP-3, beta subunit (InterPro:IPR017108), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: Adaptin family protein (TAIR:AT4G23460.1); Has 2490 Blast hits to 1771 proteins in 223 species: Archae - 0; Bacteria - 20; Metazoa - 1008; Fungi - 721; Plants - 224; Viruses - 0; Other Eukaryotes - 517 (source: NCBI BLink). & (gnl|cdd|36278 : 774.0) no description available & (gnl|cdd|85562 : 220.0) no description available & (reliability: 2438.0) & (original description: Putative AP3BA, Description = AP3-complex subunit beta-A, PFAM = PF14796;PF01602)' T '31.4' 'cell.vesicle transport' 'niben101scf04237_27154-33875' '(at1g79070 : 104.0) SNARE-associated protein-related; Has 39 Blast hits to 39 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative PGSC0003DMG400022130, Description = Os08g0129900 protein, PFAM = PF14712)' T '31.4' 'cell.vesicle transport' 'niben101scf04292_33234-53558' '(at5g58440 : 581.0) sorting nexin 2A (SNX2a); FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2B (TAIR:AT5G07120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37484 : 210.0) no description available & (gnl|cdd|72740 : 84.9) no description available & (reliability: 1162.0) & (original description: Putative SNX2A, Description = Sorting nexin 2A, PFAM = PF00787;PF09325)' T '31.4' 'cell.vesicle transport' 'niben101scf04316_569919-573274' '(at1g17140 : 148.0) Encodes a ROP/RAC effector, designated interactor of constitutive active ROPs 1 (ICR1), that interacts with GTP-bound ROPs. ICR1 is a scaffold mediating formation of protein complexes that are required for cell polarity. ICR1 is comprised of coiled-coil domains and forms complexes with itself and the exocyst vesicle-tethering complex subunit SEC3.; interactor of constitutive active rops 1 (ICR1); BEST Arabidopsis thaliana protein match is: ROP interactive partner 2 (TAIR:AT1G78430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative ICR1, Description = Interactor of constitutive active ROPs 1, PFAM = )' T '31.4' 'cell.vesicle transport' 'niben101scf04371_483367-497275' '(at1g08190 : 1441.0) Might be involved in protein sorting to the vacuole.; vacuolar protein sorting 41 (VPS41); FUNCTIONS IN: binding, nucleotide binding, zinc ion binding; INVOLVED IN: gravitropism, protein targeting to vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type (InterPro:IPR001841), WD40 repeat (InterPro:IPR001680), Vacuolar protein sorting-associated protein 41 (InterPro:IPR016902), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781), Clathrin, heavy chain/VPS, 7-fold repeat (InterPro:IPR000547); Has 13288 Blast hits to 4251 proteins in 360 species: Archae - 4; Bacteria - 340; Metazoa - 7814; Fungi - 1141; Plants - 584; Viruses - 346; Other Eukaryotes - 3059 (source: NCBI BLink). & (gnl|cdd|37277 : 930.0) no description available & (gnl|cdd|47627 : 104.0) no description available & (reliability: 2882.0) & (original description: Putative VPS41, Description = Vacuolar protein sorting-associated protein 41 homolog, PFAM = PF00637)' T '31.4' 'cell.vesicle transport' 'niben101scf04424_439363-455532' '(at1g79990 : 1541.0) structural molecules; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Coatomer, beta' subunit (InterPro:IPR016453), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, beta' subunit (TAIR:AT1G52360.1); Has 74269 Blast hits to 32109 proteins in 811 species: Archae - 56; Bacteria - 8450; Metazoa - 29737; Fungi - 16170; Plants - 9747; Viruses - 0; Other Eukaryotes - 10109 (source: NCBI BLink). & (gnl|cdd|35497 : 1306.0) no description available & (gnl|cdd|67661 : 531.0) no description available & (p93107|pf20_chlre : 90.5) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 3082.0) & (original description: Putative copB2, Description = Coatomer subunit beta, PFAM = PF00400;PF00400;PF00400;PF00400;PF04053)' T '31.4' 'cell.vesicle transport' 'niben101scf04495_17422-26425' '(at5g38840 : 522.0) SMAD/FHA domain-containing protein ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: SMAD/FHA domain-containing protein (TAIR:AT5G47790.1); Has 18317 Blast hits to 13795 proteins in 1254 species: Archae - 157; Bacteria - 2798; Metazoa - 7417; Fungi - 1475; Plants - 704; Viruses - 54; Other Eukaryotes - 5712 (source: NCBI BLink). & (gnl|cdd|37092 : 313.0) no description available & (gnl|cdd|28942 : 100.0) no description available & (reliability: 1044.0) & (original description: Putative glysoja_016059, Description = Kanadaptin, PFAM = PF00498)' T '31.4' 'cell.vesicle transport' 'niben101scf04664_245228-252947' '(at4g34660 : 493.0) SH3 domain-containing protein; FUNCTIONS IN: clathrin binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Src homology-3 domain (InterPro:IPR001452); BEST Arabidopsis thaliana protein match is: SH3 domain-containing protein (TAIR:AT4G18060.1). & (reliability: 986.0) & (original description: Putative SH3P2, Description = SH3 domain-containing protein 2, PFAM = PF14604)' T '31.4' 'cell.vesicle transport' 'niben101scf04714_450714-458279' '(at2g45200 : 384.0) Encodes a member of the GOS1 (Golgi SNARE) gene family.; golgi snare 12 (GOS12); FUNCTIONS IN: SNARE binding; INVOLVED IN: cellular membrane fusion, intra-Golgi vesicle-mediated transport; LOCATED IN: cytosol, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: golgi snare 11 (TAIR:AT1G15880.1). & (gnl|cdd|38418 : 257.0) no description available & (gnl|cdd|68577 : 93.5) no description available & (reliability: 768.0) & (original description: Putative GOS12, Description = Golgi SNAP receptor complex member 1-2, PFAM = PF12352)' T '31.4' 'cell.vesicle transport' 'niben101scf04778_278636-288745' '(at4g34450 : 1467.0) coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative; FUNCTIONS IN: clathrin binding, structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Coatomer, gamma subunit, appendage, Ig-like subdomain (InterPro:IPR013040), Armadillo-like helical (InterPro:IPR011989), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Coatomer, gamma subunit (InterPro:IPR017106), Coatomer, gamma subunit , appendage (InterPro:IPR014863), Armadillo-type fold (InterPro:IPR016024), Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain (InterPro:IPR015873), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: structural molecules (TAIR:AT2G16200.1); Has 1647 Blast hits to 1638 proteins in 222 species: Archae - 2; Bacteria - 2; Metazoa - 707; Fungi - 446; Plants - 176; Viruses - 0; Other Eukaryotes - 314 (source: NCBI BLink). & (gnl|cdd|36294 : 1162.0) no description available & (gnl|cdd|34837 : 642.0) no description available & (reliability: 2934.0) & (original description: Putative copG, Description = Coatomer subunit gamma, PFAM = PF01602;PF16381;PF08752)' T '31.4' 'cell.vesicle transport' 'niben101scf04784_147511-155298' '(gnl|cdd|66892 : 257.0) no description available & (gnl|cdd|36901 : 255.0) no description available & (at2g21600 : 233.0) Key player of retrieval of ER membrane proteins; endoplasmatic reticulum retrieval protein 1B (RER1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: retrograde vesicle-mediated transport, Golgi to ER; LOCATED IN: Golgi apparatus, endoplasmic reticulum, cis-Golgi network; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: Rer1 family protein (TAIR:AT4G39220.1); Has 516 Blast hits to 512 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 154; Fungi - 152; Plants - 129; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative RER1B, Description = Protein RER1B, PFAM = PF03248)' T '31.4' 'cell.vesicle transport' 'niben101scf04785_36829-46887' '(at1g08820 : 157.0) Encodes VAP33-like protein that interacts with cowpea mosaic virus protein 60K. Is a SNARE-like protein that may be involved in vesicular transport to or from the ER.; vamp/synaptobrevin-associated protein 27-2 (VAP27-2); FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular transport; LOCATED IN: plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535); BEST Arabidopsis thaliana protein match is: vesicle associated protein (TAIR:AT3G60600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84916 : 100.0) no description available & (gnl|cdd|35660 : 98.0) no description available & (reliability: 314.0) & (original description: Putative BnaC05g06420D, Description = BnaC05g06420D protein, PFAM = PF00635)' T '31.4' 'cell.vesicle transport' 'niben101scf04804_133591-136539' '(at5g52270 : 177.0) SNARE-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Synaptobrevin family protein (TAIR:AT1G11890.1); Has 498 Blast hits to 498 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 226; Fungi - 127; Plants - 80; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|36080 : 156.0) no description available & (reliability: 354.0) & (original description: Putative SEC22, Description = R-SNARE, SEC22-family, PFAM = PF13774)' T '31.4' 'cell.vesicle transport' 'niben101scf04955_818917-822315' '(at1g17140 : 137.0) Encodes a ROP/RAC effector, designated interactor of constitutive active ROPs 1 (ICR1), that interacts with GTP-bound ROPs. ICR1 is a scaffold mediating formation of protein complexes that are required for cell polarity. ICR1 is comprised of coiled-coil domains and forms complexes with itself and the exocyst vesicle-tethering complex subunit SEC3.; interactor of constitutive active rops 1 (ICR1); BEST Arabidopsis thaliana protein match is: ROP interactive partner 2 (TAIR:AT1G78430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative ICR4, Description = Interactor of constitutive active ROPs 4, PFAM = )' T '31.4' 'cell.vesicle transport' 'niben101scf04988_7295-24098' '(at4g23460 : 1397.0) Adaptin family protein; FUNCTIONS IN: protein transporter activity, clathrin binding, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Armadillo-like helical (InterPro:IPR011989), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Clathrin adaptor, beta-adaptin, appendage, Ig-like subdomain (InterPro:IPR013037), Clathrin adaptor, beta-adaptin, appendage, C-terminal subdomain (InterPro:IPR015151), Beta2-adaptin/TATA-box binding, C-terminal (InterPro:IPR012295), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Adaptor protein complex, beta subunit (InterPro:IPR016342), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: Adaptin family protein (TAIR:AT4G11380.1); Has 3513 Blast hits to 3431 proteins in 288 species: Archae - 10; Bacteria - 22; Metazoa - 1477; Fungi - 873; Plants - 441; Viruses - 0; Other Eukaryotes - 690 (source: NCBI BLink). & (gnl|cdd|36279 : 873.0) no description available & (gnl|cdd|85562 : 499.0) no description available & (reliability: 2794.0) & (original description: Putative ap1b1, Description = AP complex subunit beta, PFAM = PF01602;PF02883;PF09066)' T '31.4' 'cell.vesicle transport' 'niben101scf05044_251012-255595' '(at1g79990 : 251.0) structural molecules; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Coatomer, beta' subunit (InterPro:IPR016453), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, beta' subunit (TAIR:AT1G52360.1); Has 74269 Blast hits to 32109 proteins in 811 species: Archae - 56; Bacteria - 8450; Metazoa - 29737; Fungi - 16170; Plants - 9747; Viruses - 0; Other Eukaryotes - 10109 (source: NCBI BLink). & (gnl|cdd|39895 : 83.1) no description available & (reliability: 502.0) & (original description: Putative Sb03g026720, Description = Putative uncharacterized protein Sb03g026720, PFAM = PF09801)' T '31.4' 'cell.vesicle transport' 'niben101scf05049_27161-45492' '(at1g06210 : 270.0) ENTH/VHS/GAT family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: Target of Myb protein 1 (TAIR:AT5G16880.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36303 : 159.0) no description available & (gnl|cdd|48658 : 116.0) no description available & (reliability: 540.0) & (original description: Putative tom2, Description = ENTH/VHS/GAT family protein, PFAM = PF00790;PF03127)' T '31.4' 'cell.vesicle transport' 'niben101scf05082_244967-248701' '(at2g21600 : 245.0) Key player of retrieval of ER membrane proteins; endoplasmatic reticulum retrieval protein 1B (RER1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: retrograde vesicle-mediated transport, Golgi to ER; LOCATED IN: Golgi apparatus, endoplasmic reticulum, cis-Golgi network; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: Rer1 family protein (TAIR:AT4G39220.1); Has 516 Blast hits to 512 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 154; Fungi - 152; Plants - 129; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|66892 : 244.0) no description available & (gnl|cdd|36901 : 242.0) no description available & (reliability: 490.0) & (original description: Putative rer1, Description = Protein RER1, PFAM = PF03248)' T '31.4' 'cell.vesicle transport' 'niben101scf05135_100607-118134' '(gnl|cdd|66892 : 235.0) no description available & (gnl|cdd|36901 : 233.0) no description available & (at4g39220 : 212.0) Key player of retrieval of ER membrane proteins; ATRER1A; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: endoplasmatic reticulum retrieval protein 1B (TAIR:AT2G21600.1); Has 516 Blast hits to 513 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 155; Fungi - 150; Plants - 130; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative RER1C, Description = Protein RER1C, PFAM = PF03248)' T '31.4' 'cell.vesicle transport' 'niben101scf05217_445770-449913' '(at4g35410 : 223.0) Clathrin adaptor complex small chain family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, clathrin vesicle coat, clathrin coat of trans-Golgi network vesicle, clathrin adaptor complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor AP1, sigma subunit (InterPro:IPR015604), Adaptor protein complex, sigma subunit (InterPro:IPR016635), Clathrin adaptor, sigma subunit/coatomer, zeta subunit (InterPro:IPR000804), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: associated protein 19 (TAIR:AT2G17380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36152 : 178.0) no description available & (gnl|cdd|34635 : 163.0) no description available & (o50016|ap2s1_maize : 127.0) AP-2 complex subunit sigma-1 (Clathrin coat assembly protein AP17) (Clathrin coat-associated protein AP17) (Plasma membrane adaptor AP-2 17 kDa protein) (Clathrin assembly protein 2 small chain) - Zea mays (Maize) & (reliability: 444.0) & (original description: Putative ap1, Description = AP-1 complex subunit sigma-2, PFAM = PF01217)' T '31.4' 'cell.vesicle transport' 'niben101scf05367_116053-122262' '(at4g34660 : 370.0) SH3 domain-containing protein; FUNCTIONS IN: clathrin binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Src homology-3 domain (InterPro:IPR001452); BEST Arabidopsis thaliana protein match is: SH3 domain-containing protein (TAIR:AT4G18060.1). & (reliability: 740.0) & (original description: Putative SH3P2, Description = SH3 domain-containing protein 2, PFAM = PF14604)' T '31.4' 'cell.vesicle transport' 'niben101scf05405_542585-579671' '(at1g50500 : 1155.0) encodes a member of VPS53 family protein involved in the retrograde trafficking of vesicles to the late Golgi. Mutants in this gene are more sensitive to heat and osmotic stress.; HEAT-INTOLERANT 1 (HIT1); CONTAINS InterPro DOMAIN/s: Vps53-like, N-terminal (InterPro:IPR007234); BEST Arabidopsis thaliana protein match is: Membrane trafficking VPS53 family protein (TAIR:AT1G50970.1). & (gnl|cdd|37391 : 630.0) no description available & (gnl|cdd|67706 : 357.0) no description available & (reliability: 2310.0) & (original description: Putative VPS53, Description = Vacuolar protein sorting-associated protein 53 A, PFAM = PF04100)' T '31.4' 'cell.vesicle transport' 'niben101scf05694_10486-13737' '(at3g11820 : 368.0) Encodes a syntaxin localized at the plasma membrane (SYR1, Syntaxin Related Protein 1, also known as SYP121, PENETRATION1/PEN1). SYR1/PEN1 is a member of the SNARE superfamily proteins. SNARE proteins are involved in cell signaling, vesicle traffic, growth and development. SYR1/PEN1 functions in positioning anchoring of the KAT1 K+ channel protein at the plasma membrane. Transcription is upregulated by abscisic acid, suggesting a role in ABA signaling. Also functions in non-host resistance against barley powdery mildew, Blumeria graminis sp. hordei. SYR1/PEN1 is a nonessential component of the preinvasive resistance against Colletotrichum fungus. Required for mlo resistance.; syntaxin of plants 121 (SYP121); FUNCTIONS IN: protein anchor, SNAP receptor activity; INVOLVED IN: in 13 processes; LOCATED IN: SNARE complex, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 122 (TAIR:AT3G52400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36028 : 267.0) no description available & (gnl|cdd|29141 : 125.0) no description available & (reliability: 736.0) & (original description: Putative SYP124, Description = Syntaxin-124, PFAM = PF05739;PF00804)' T '31.4' 'cell.vesicle transport' 'niben101scf05849_11513-14178' '(at2g38360 : 219.0) prenylated RAB acceptor 1.B4 (PRA1.B4); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: prenylated RAB acceptor 1.B5 (TAIR:AT5G01640.1); Has 506 Blast hits to 506 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 53; Plants - 299; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|38352 : 201.0) no description available & (gnl|cdd|86276 : 171.0) no description available & (reliability: 438.0) & (original description: Putative PRA1B4, Description = PRA1 family protein B4, PFAM = PF03208)' T '31.4' 'cell.vesicle transport' 'niben101scf05904_18522-30740' '(at5g46860 : 306.0) Syntaxin-related protein required for vacuolar assembly. A member of t-SNARE superfamily, homologous to yest Vam3p. Localized in the vacuolar membranes. The protein has a heptad repeat structure (residues164ñ220) in which hydrophobic amino acid residues appear at seven amino acid intervals. Such regions have a high potential to form an amphiphilic a-helix, intriguing for the intermolecular interactions by forming coiled-coil structure. AtVam3p has a highly hydrophobic segment at its C terminus thus implicating it to be a membrane protein while the rest of the sequence is hydrophilic.; VACUOLAR MORPHOLOGY 3 (VAM3); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: in 7 processes; LOCATED IN: late endosome, trans-Golgi network transport vesicle, plant-type vacuole membrane, vacuole, plant-type vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 23 (TAIR:AT4G17730.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36029 : 194.0) no description available & (gnl|cdd|29141 : 84.9) no description available & (reliability: 612.0) & (original description: Putative Syn, Description = Syntaxin-like protein, PFAM = PF14523;PF05739)' T '31.4' 'cell.vesicle transport' 'niben101scf05956_167998-174499' '(at5g47180 : 225.0) Plant VAMP (vesicle-associated membrane protein) family protein; FUNCTIONS IN: structural molecule activity; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: vesicle associated protein (TAIR:AT3G60600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35660 : 106.0) no description available & (gnl|cdd|84916 : 98.9) no description available & (reliability: 450.0) & (original description: Putative PVA21, Description = Vesicle-associated protein 2-1, PFAM = PF00635)' T '31.4' 'cell.vesicle transport' 'niben101scf05969_128244-134973' '(at3g50860 : 217.0) Clathrin adaptor complex small chain family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, clathrin vesicle coat; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adaptor protein complex, sigma subunit (InterPro:IPR016635), Clathrin adaptor, sigma subunit/coatomer, zeta subunit (InterPro:IPR000804), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT2G19790.1); Has 2004 Blast hits to 2002 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 926; Fungi - 430; Plants - 303; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink). & (gnl|cdd|36154 : 206.0) no description available & (gnl|cdd|65045 : 148.0) no description available & (o50016|ap2s1_maize : 88.6) AP-2 complex subunit sigma-1 (Clathrin coat assembly protein AP17) (Clathrin coat-associated protein AP17) (Plasma membrane adaptor AP-2 17 kDa protein) (Clathrin assembly protein 2 small chain) - Zea mays (Maize) & (reliability: 434.0) & (original description: Putative or, Description = Adaptor protein complex AP-3 small chain sigma3, PFAM = PF01217)' T '31.4' 'cell.vesicle transport' 'niben101scf05982_163207-176012' '(at1g02010 : 899.0) member of KEULE Gene Family; secretory 1A (SEC1A); FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, vesicle-mediated transport, vesicle docking involved in exocytosis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: Sec1/munc18-like (SM) proteins superfamily (TAIR:AT1G12360.1). & (q7xwp3|sec1a_orysa : 802.0) Probable protein transport Sec1a - Oryza sativa (Rice) & (gnl|cdd|36514 : 588.0) no description available & (gnl|cdd|85171 : 292.0) no description available & (reliability: 1750.0) & (original description: Putative SEC1A, Description = Protein transport Sec1a, PFAM = PF00995)' T '31.4' 'cell.vesicle transport' 'niben101scf06009_50023-57629' '(at5g61210 : 293.0) membrane localized t-SNARE SNAP25 homologue, probably involved in cytokinesis and cell plate formation; soluble N-ethylmaleimide-sensitive factor adaptor protein 33 (SNAP33); FUNCTIONS IN: protein binding, SNAP receptor activity; INVOLVED IN: vesicle-mediated transport, response to other organism, cellular membrane fusion, response to mechanical stimulus, cytokinesis by cell plate formation; LOCATED IN: integral to membrane of membrane fraction, plasma membrane, chloroplast, cell plate; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNAP-25 (InterPro:IPR000928), Target SNARE coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: soluble N-ethylmaleimide-sensitive factor adaptor protein 30 (TAIR:AT1G13890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38275 : 171.0) no description available & (reliability: 586.0) & (original description: Putative SNAP33, Description = SNAP25 homologous protein SNAP33, PFAM = )' T '31.4' 'cell.vesicle transport' 'niben101scf06023_98270-121233' '(at5g12370 : 1159.0) exocyst complex component sec10 (SEC10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: exocytosis, vesicle docking; LOCATED IN: plasma membrane, membrane, exocyst; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exocyst complex component Sec10 (InterPro:IPR009976); Has 533 Blast hits to 489 proteins in 174 species: Archae - 0; Bacteria - 6; Metazoa - 178; Fungi - 253; Plants - 59; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (q2qv94|exoc5_orysa : 1065.0) Exocyst complex component 5 (Exocyst complex component Sec10) - Oryza sativa (Rice) & (gnl|cdd|70844 : 643.0) no description available & (gnl|cdd|38949 : 201.0) no description available & (reliability: 2318.0) & (original description: Putative SEC10, Description = Exocyst complex component SEC10, PFAM = PF07393;PF07393)' T '31.4' 'cell.vesicle transport' 'niben101scf06023_98283-105693' '(q2qv94|exoc5_orysa : 156.0) Exocyst complex component 5 (Exocyst complex component Sec10) - Oryza sativa (Rice) & (at5g12370 : 150.0) exocyst complex component sec10 (SEC10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: exocytosis, vesicle docking; LOCATED IN: plasma membrane, membrane, exocyst; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exocyst complex component Sec10 (InterPro:IPR009976); Has 533 Blast hits to 489 proteins in 174 species: Archae - 0; Bacteria - 6; Metazoa - 178; Fungi - 253; Plants - 59; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|70844 : 112.0) no description available & (reliability: 300.0) & (original description: Putative SEC10, Description = Exocyst complex component 5, PFAM = PF07393)' T '31.4' 'cell.vesicle transport' 'niben101scf06128_20596-33242' '(at1g16240 : 236.0) Encodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed.; syntaxin of plants 51 (SYP51); CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012); BEST Arabidopsis thaliana protein match is: syntaxin of plants 52 (TAIR:AT1G79590.2); Has 550 Blast hits to 550 proteins in 163 species: Archae - 0; Bacteria - 4; Metazoa - 169; Fungi - 163; Plants - 161; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|38412 : 165.0) no description available & (reliability: 472.0) & (original description: Putative SYP51, Description = Syntaxin-51, PFAM = PF05739)' T '31.4' 'cell.vesicle transport' 'niben101scf06144_15582-19480' '(gnl|cdd|86233 : 478.0) no description available & (gnl|cdd|37555 : 476.0) no description available & (at2g39380 : 435.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H2 (EXO70H2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: leaf apex, hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H1 (TAIR:AT3G55150.1); Has 836 Blast hits to 829 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 44; Plants - 635; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 848.0) & (original description: Putative EXO70H2, Description = Exocyst subunit exo70 family protein H2, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'niben101scf06154_139485-142294' '(at4g10170 : 239.0) SNARE-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT1G33475.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 478.0) & (original description: Putative PHYL1.1, Description = Phytolongin Phyl1.1, PFAM = )' T '31.4' 'cell.vesicle transport' 'niben101scf06171_198155-208155' '(at4g36520 : 189.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G12770.2); Has 187564 Blast hits to 104912 proteins in 3501 species: Archae - 1251; Bacteria - 31029; Metazoa - 79517; Fungi - 15919; Plants - 9547; Viruses - 688; Other Eukaryotes - 49613 (source: NCBI BLink). & (gnl|cdd|35652 : 159.0) no description available & (reliability: 344.0) & (original description: Putative AUL1, Description = Auxilin-related protein 2, PFAM = )' T '31.4' 'cell.vesicle transport' 'niben101scf06205_263271-269030' '(at3g22845 : 340.0) emp24/gp25L/p24 family/GOLD family protein; INVOLVED IN: transport; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT3G07680.1); Has 1821 Blast hits to 1821 proteins in 239 species: Archae - 0; Bacteria - 0; Metazoa - 918; Fungi - 476; Plants - 264; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|36905 : 203.0) no description available & (reliability: 680.0) & (original description: Putative At3g22845, Description = Transmembrane emp24 domain-containing protein p24beta3, PFAM = PF01105)' T '31.4' 'cell.vesicle transport' 'niben101scf06590_702369-706319' '(gnl|cdd|86233 : 476.0) no description available & (gnl|cdd|37555 : 470.0) no description available & (at3g09520 : 434.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H4 (EXO70H4); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: stem, sperm cell, stamen, pollen tube; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H3 (TAIR:AT3G09530.1); Has 837 Blast hits to 827 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 71; Plants - 622; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 868.0) & (original description: Putative BnaA06g04270D, Description = BnaA06g04270D protein, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'niben101scf06734_145047-175629' '(at1g60070 : 1249.0) Adaptor protein complex AP-1, gamma subunit; FUNCTIONS IN: protein transporter activity, clathrin binding, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, Golgi apparatus part, Golgi apparatus, clathrin adaptor complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adaptor protein complex AP-1, gamma subunit (InterPro:IPR017107), Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Armadillo-like helical (InterPro:IPR011989), Clathrin adaptor, gamma-adaptin, appendage (InterPro:IPR008153), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: gamma-adaptin 1 (TAIR:AT1G23900.2). & (gnl|cdd|36280 : 1044.0) no description available & (gnl|cdd|85562 : 428.0) no description available & (reliability: 2498.0) & (original description: Putative aptC, Description = AP-1 complex subunit gamma-1, PFAM = PF01602;PF02883)' T '31.4' 'cell.vesicle transport' 'niben101scf06814_133219-139703' '(at5g46860 : 288.0) Syntaxin-related protein required for vacuolar assembly. A member of t-SNARE superfamily, homologous to yest Vam3p. Localized in the vacuolar membranes. The protein has a heptad repeat structure (residues164ñ220) in which hydrophobic amino acid residues appear at seven amino acid intervals. Such regions have a high potential to form an amphiphilic a-helix, intriguing for the intermolecular interactions by forming coiled-coil structure. AtVam3p has a highly hydrophobic segment at its C terminus thus implicating it to be a membrane protein while the rest of the sequence is hydrophilic.; VACUOLAR MORPHOLOGY 3 (VAM3); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: in 7 processes; LOCATED IN: late endosome, trans-Golgi network transport vesicle, plant-type vacuole membrane, vacuole, plant-type vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 23 (TAIR:AT4G17730.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36029 : 198.0) no description available & (gnl|cdd|29141 : 83.4) no description available & (reliability: 576.0) & (original description: Putative Syn, Description = Syntaxin-like protein, PFAM = PF05739;PF14523)' T '31.4' 'cell.vesicle transport' 'niben101scf06861_87812-90937' '(gnl|cdd|37195 : 178.0) no description available & (at3g44340 : 166.0) homologous to yeast and animal Sec24 proteins; expression in yeast cells enhances their survival under oxidative stress conditions.; clone eighty-four (CEF); FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: response to oxidative stress, vesicle-mediated transport; LOCATED IN: COPII vesicle coat, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT4G32640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34633 : 99.7) no description available & (reliability: 330.0) & (original description: Putative CEF, Description = Protein transport protein Sec24-like CEF, PFAM = PF00626;PF04815)' T '31.4' 'cell.vesicle transport' 'niben101scf06861_91017-101579' '(at3g44340 : 759.0) homologous to yeast and animal Sec24 proteins; expression in yeast cells enhances their survival under oxidative stress conditions.; clone eighty-four (CEF); FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: response to oxidative stress, vesicle-mediated transport; LOCATED IN: COPII vesicle coat, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT4G32640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37195 : 603.0) no description available & (gnl|cdd|34633 : 333.0) no description available & (reliability: 1438.0) & (original description: Putative CEF, Description = Protein transport protein Sec24-like CEF, PFAM = PF08033;PF04810;PF04811)' T '31.4' 'cell.vesicle transport' 'niben101scf06996_176720-182708' '(at3g05710 : 417.0) member of SYP4 Gene Family; syntaxin of plants 43 (SYP43); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: intracellular protein transport, cellular membrane fusion; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 41 (TAIR:AT5G26980.2); Has 2056 Blast hits to 2056 proteins in 255 species: Archae - 6; Bacteria - 12; Metazoa - 855; Fungi - 475; Plants - 368; Viruses - 0; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|36027 : 316.0) no description available & (gnl|cdd|34907 : 111.0) no description available & (reliability: 834.0) & (original description: Putative SYP43, Description = Syntaxin-43, PFAM = PF05739)' T '31.4' 'cell.vesicle transport' 'niben101scf07187_57883-65086' '(at1g79590 : 290.0) Encodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed.; syntaxin of plants 52 (SYP52); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: vesicle-mediated transport; LOCATED IN: endosome membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), Syntaxin/epimorphin, conserved site (InterPro:IPR006012); BEST Arabidopsis thaliana protein match is: syntaxin of plants 51 (TAIR:AT1G16240.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38412 : 185.0) no description available & (reliability: 580.0) & (original description: Putative SYP52, Description = Syntaxin-52, PFAM = )' T '31.4' 'cell.vesicle transport' 'niben101scf07231_182827-193198' '(at5g39510 : 263.0) Encodes a member of SNARE gene family. Homologous with yeast VTI1 and is involved in vesicle transport. Mutant alleles such as sgr4/zig are defective in the shoots response to gravity resulting in a zigzag growth pattern of the stem. Involved in protein trafficking to lytic vacuoles. Can conditionally substitute VTI12 in protein storage vacuole trafficking when plants are devoid of VTI12.; SHOOT GRAVITROPSIM 4 (SGR4); FUNCTIONS IN: receptor activity; INVOLVED IN: gravitropism, Golgi to vacuole transport, protein targeting to vacuole; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Vesicle transport v-SNARE, N-terminal (InterPro:IPR007705); BEST Arabidopsis thaliana protein match is: vesicle transport V-snare 13 (TAIR:AT3G29100.1); Has 744 Blast hits to 742 proteins in 201 species: Archae - 0; Bacteria - 0; Metazoa - 276; Fungi - 144; Plants - 174; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|36879 : 237.0) no description available & (gnl|cdd|68577 : 115.0) no description available & (reliability: 526.0) & (original description: Putative vti1, Description = Qb-SNARE, VTI1-family, PFAM = PF05008;PF12352)' T '31.4' 'cell.vesicle transport' 'niben101scf07255_158314-162596' '(at3g50860 : 237.0) Clathrin adaptor complex small chain family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, clathrin vesicle coat; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adaptor protein complex, sigma subunit (InterPro:IPR016635), Clathrin adaptor, sigma subunit/coatomer, zeta subunit (InterPro:IPR000804), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT2G19790.1); Has 2004 Blast hits to 2002 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 926; Fungi - 430; Plants - 303; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink). & (gnl|cdd|36154 : 212.0) no description available & (gnl|cdd|34635 : 146.0) no description available & (o50016|ap2s1_maize : 84.0) AP-2 complex subunit sigma-1 (Clathrin coat assembly protein AP17) (Clathrin coat-associated protein AP17) (Plasma membrane adaptor AP-2 17 kDa protein) (Clathrin assembly protein 2 small chain) - Zea mays (Maize) & (reliability: 474.0) & (original description: Putative or, Description = AP-3 complex subunit sigma-2, PFAM = PF01217)' T '31.4' 'cell.vesicle transport' 'niben101scf07288_808097-842009' '(at1g31730 : 1262.0) Adaptin family protein; FUNCTIONS IN: clathrin binding, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Adaptor protein complex AP-4, epsilon subunit (InterPro:IPR017109), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: Adaptor protein complex AP-1, gamma subunit (TAIR:AT1G60070.1); Has 4728 Blast hits to 3440 proteins in 365 species: Archae - 0; Bacteria - 98; Metazoa - 1563; Fungi - 860; Plants - 412; Viruses - 3; Other Eukaryotes - 1792 (source: NCBI BLink). & (gnl|cdd|36280 : 712.0) no description available & (gnl|cdd|85562 : 240.0) no description available & (reliability: 2524.0) & (original description: Putative At1g31730, Description = AP-4 complex subunit epsilon, PFAM = PF01602)' T '31.4' 'cell.vesicle transport' 'niben101scf07294_102925-111602' '(at3g09740 : 320.0) syntaxin of plants 71 (SYP71); syntaxin of plants 71 (SYP71); FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, protein targeting to membrane; LOCATED IN: integral to membrane, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), Syntaxin/epimorphin, conserved site (InterPro:IPR006012); BEST Arabidopsis thaliana protein match is: syntaxin of plants 72 (TAIR:AT3G45280.1); Has 541 Blast hits to 539 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 116; Plants - 188; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (reliability: 640.0) & (original description: Putative SYP71, Description = Syntaxin-71, PFAM = PF05739)' T '31.4' 'cell.vesicle transport' 'niben101scf07391_89401-99850' '(at4g23040 : 327.0) Ubiquitin-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G11740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36577 : 167.0) no description available & (reliability: 650.0) & (original description: Putative PUX13, Description = Plant UBX domain-containing protein 13, PFAM = PF00789;PF14555)' T '31.4' 'cell.vesicle transport' 'niben101scf07404_399859-403378' '(at1g08560 : 341.0) member of SYP11 syntaxin Gene Family; syntaxin of plants 111 (SYP111); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: intracellular protein transport, response to cyclopentenone, cellular membrane fusion; LOCATED IN: endomembrane system, plasma membrane, phragmoplast, cell plate; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 124 (TAIR:AT1G61290.1); Has 2504 Blast hits to 2496 proteins in 285 species: Archae - 12; Bacteria - 41; Metazoa - 1133; Fungi - 466; Plants - 469; Viruses - 2; Other Eukaryotes - 381 (source: NCBI BLink). & (gnl|cdd|36028 : 238.0) no description available & (gnl|cdd|29141 : 118.0) no description available & (reliability: 682.0) & (original description: Putative kn, Description = Knolle, PFAM = PF00804;PF05739)' T '31.4' 'cell.vesicle transport' 'niben101scf07429_70594-76293' '(at3g03800 : 248.0) member of SYP13 Gene Family; syntaxin of plants 131 (SYP131); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: intracellular protein transport, cellular membrane fusion; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 132 (TAIR:AT5G08080.1); Has 2798 Blast hits to 2798 proteins in 353 species: Archae - 4; Bacteria - 78; Metazoa - 1293; Fungi - 501; Plants - 492; Viruses - 0; Other Eukaryotes - 430 (source: NCBI BLink). & (gnl|cdd|36028 : 225.0) no description available & (gnl|cdd|29141 : 104.0) no description available & (reliability: 496.0) & (original description: Putative SYP131, Description = Putative syntaxin-131, PFAM = PF00804;PF05739)' T '31.4' 'cell.vesicle transport' 'niben101scf07510_137281-142769' '(at5g54110 : 278.0) Encodes a highly polar protein with more than 60% hydrophilic amino acid residues that is associated with the plasma membrane. It has limited secondary structure similarity to VAP-33 from Aplysia, which may be involved in membrane trafficking.; membrane-associated mannitol-induced (MAMI); FUNCTIONS IN: structural molecule activity; INVOLVED IN: response to osmotic stress; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535); BEST Arabidopsis thaliana protein match is: PapD-like superfamily protein (TAIR:AT4G21450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35660 : 101.0) no description available & (gnl|cdd|84916 : 89.3) no description available & (reliability: 556.0) & (original description: Putative PVA41, Description = Vesicle-associated protein 4-1, PFAM = PF00635)' T '31.4' 'cell.vesicle transport' 'niben101scf07639_621596-625959' '(at5g01430 : 142.0) Got1/Sft2-like vescicle transport protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Got1/SFT2-like (InterPro:IPR007305); BEST Arabidopsis thaliana protein match is: Got1/Sft2-like vescicle transport protein family (TAIR:AT3G49420.1). & (gnl|cdd|36954 : 119.0) no description available & (gnl|cdd|67778 : 98.7) no description available & (reliability: 284.0) & (original description: Putative GOT1A, Description = Vesicle transport protein GOT1A, PFAM = PF04178)' T '31.4' 'cell.vesicle transport' 'niben101scf07729_374725-390739' '(at5g22770 : 1631.0) alpha-adaptin (alpha-ADR); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: male gametophyte, pollen tube, leaf; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Adaptor protein complex AP-2, alpha subunit (InterPro:IPR017104), Armadillo-like helical (InterPro:IPR011989), Clathrin adaptor, alpha-adaptin, appendage, Ig-like subdomain (InterPro:IPR013038), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Clathrin adaptor, alpha-adaptin, appendage, C-terminal subdomain (InterPro:IPR003164), Armadillo-type fold (InterPro:IPR016024), Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain (InterPro:IPR015873), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: Adaptor protein complex AP-2, alpha subunit (TAIR:AT5G22780.1); Has 2529 Blast hits to 2470 proteins in 297 species: Archae - 0; Bacteria - 0; Metazoa - 987; Fungi - 687; Plants - 265; Viruses - 0; Other Eukaryotes - 590 (source: NCBI BLink). & (gnl|cdd|36293 : 1168.0) no description available & (gnl|cdd|85562 : 328.0) no description available & (reliability: 3262.0) & (original description: Putative AP2A, Description = Putative AP-2 complex subunit alpha, PFAM = PF01602;PF02883;PF02296)' T '31.4' 'cell.vesicle transport' 'niben101scf08230_136412-149428' '(at5g03540 : 909.0) AtEXO70A1 is a member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into nine clusters on the phylogenetic tree; exocyst subunit exo70 family protein A1 (EXO70A1); CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein A2 (TAIR:AT5G52340.1). & (gnl|cdd|37555 : 536.0) no description available & (gnl|cdd|86233 : 392.0) no description available & (reliability: 1818.0) & (original description: Putative EXO70A1, Description = Exocyst complex component EXO70A1, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'niben101scf08443_12046-18894' '(at4g21450 : 261.0) PapD-like superfamily protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535); BEST Arabidopsis thaliana protein match is: PapD-like superfamily protein (TAIR:AT4G05060.1). & (gnl|cdd|35660 : 86.5) no description available & (gnl|cdd|84916 : 80.0) no description available & (reliability: 522.0) & (original description: Putative MAMI, Description = Vesicle-associated protein 4-2, PFAM = PF00635)' T '31.4' 'cell.vesicle transport' 'niben101scf08515_26312-33776' '(at5g22360 : 348.0) Member of Synaptobrevin-like AtVAMP7C, v-SNARE protein family.; vesicle-associated membrane protein 714 (VAMP714); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: Golgi apparatus, vacuole, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 713 (TAIR:AT5G11150.1); Has 2317 Blast hits to 2315 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 867; Fungi - 487; Plants - 553; Viruses - 0; Other Eukaryotes - 410 (source: NCBI BLink). & (gnl|cdd|36077 : 284.0) no description available & (gnl|cdd|85150 : 85.7) no description available & (reliability: 696.0) & (original description: Putative VAMP714, Description = Vesicle-associated membrane protein 714, PFAM = PF00957;PF13774)' T '31.4' 'cell.vesicle transport' 'niben101scf08653_527497-535517' '(at1g18190 : 289.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC2 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (508ñ668 aa) portion of the protein.; golgin candidate 2 (GC2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: golgin candidate 1 (TAIR:AT2G19950.1); Has 50245 Blast hits to 32562 proteins in 2069 species: Archae - 503; Bacteria - 6561; Metazoa - 24889; Fungi - 4466; Plants - 2316; Viruses - 153; Other Eukaryotes - 11357 (source: NCBI BLink). & (reliability: 578.0) & (original description: Putative Sb06g031010, Description = Putative uncharacterized protein Sb06g031010, PFAM = PF09787)' T '31.4' 'cell.vesicle transport' 'niben101scf08664_121039-125900' '(at1g52360 : 362.0) Coatomer, beta' subunit; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 (InterPro:IPR011048), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Coatomer, beta' subunit (InterPro:IPR016453), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, beta' subunit (TAIR:AT3G15980.3). & (gnl|cdd|35497 : 227.0) no description available & (gnl|cdd|67661 : 168.0) no description available & (reliability: 724.0) & (original description: Putative copB2, Description = Coatomer subunit beta, PFAM = PF04053)' T '31.4' 'cell.vesicle transport' 'niben101scf08776_281667-329531' '(at4g32760 : 511.0) ENTH/VHS/GAT family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), GAT (InterPro:IPR004152), VHS subgroup (InterPro:IPR018205), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS/GAT family protein (TAIR:AT3G08790.1). & (gnl|cdd|36303 : 327.0) no description available & (gnl|cdd|48658 : 166.0) no description available & (reliability: 1022.0) & (original description: Putative At4g32760, Description = ENTH/VHS/GAT family protein, PFAM = PF03127;PF00790)' T '31.4' 'cell.vesicle transport' 'niben101scf09025_141289-145283' '(at5g50380 : 686.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein F1 (EXO70F1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: plasma membrane, exocyst; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein D3 (TAIR:AT3G14090.1); Has 952 Blast hits to 944 proteins in 146 species: Archae - 0; Bacteria - 2; Metazoa - 140; Fungi - 117; Plants - 671; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|37555 : 548.0) no description available & (gnl|cdd|86233 : 427.0) no description available & (reliability: 1372.0) & (original description: Putative EXO70F1, Description = Exocyst subunit exo70 family protein F1, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'niben101scf09170_309977-317290' '(at1g60970 : 244.0) SNARE-like superfamily protein; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: clathrin vesicle coat; EXPRESSED IN: leaf whorl, sperm cell, pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT3G09800.1); Has 621 Blast hits to 621 proteins in 219 species: Archae - 0; Bacteria - 0; Metazoa - 227; Fungi - 139; Plants - 149; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|38553 : 208.0) no description available & (gnl|cdd|35100 : 94.3) no description available & (reliability: 482.0) & (original description: Putative copz1, Description = Coatomer subunit zeta-1, PFAM = PF01217)' T '31.4' 'cell.vesicle transport' 'niben101scf09552_175327-184139' '(gnl|cdd|37846 : 484.0) no description available & (at5g05010 : 313.0) clathrin adaptor complexes medium subunit family protein; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Longin-like (InterPro:IPR011012); Has 717 Blast hits to 709 proteins in 223 species: Archae - 0; Bacteria - 2; Metazoa - 237; Fungi - 248; Plants - 88; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (p49661|copd_orysa : 301.0) Coatomer subunit delta (Delta-coat protein) (Delta-COP) (Archain) - Oryza sativa (Rice) & (gnl|cdd|85129 : 93.2) no description available & (reliability: 626.0) & (original description: Putative copd, Description = Coatomer subunit delta, PFAM = PF00928)' T '31.4' 'cell.vesicle transport' 'niben101scf09604_73187-81250' '(at4g31480 : 1547.0) Coatomer, beta subunit; FUNCTIONS IN: clathrin binding, structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: male gametophyte, guard cell; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Coatomer, beta subunit, C-terminal (InterPro:IPR011710), Armadillo-like helical (InterPro:IPR011989), Coatomer, beta subunit (InterPro:IPR016460), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: Coatomer, beta subunit (TAIR:AT4G31490.1). & (gnl|cdd|36276 : 1209.0) no description available & (gnl|cdd|71159 : 352.0) no description available & (reliability: 3094.0) & (original description: Putative bCOP, Description = Beta-coat protein, PFAM = PF01602;PF14806;PF07718)' T '31.4' 'cell.vesicle transport' 'niben101scf09706_76326-80137' '(at1g72470 : 777.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein D1 (EXO70D1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein D2 (TAIR:AT1G54090.1); Has 916 Blast hits to 905 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 142; Fungi - 103; Plants - 652; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|37555 : 542.0) no description available & (gnl|cdd|86233 : 484.0) no description available & (reliability: 1554.0) & (original description: Putative EXO70D3, Description = Exocyst subunit exo70 family protein D3, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'niben101scf10152_368754-371407' '(gnl|cdd|38352 : 193.0) no description available & (at2g38360 : 190.0) prenylated RAB acceptor 1.B4 (PRA1.B4); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: prenylated RAB acceptor 1.B5 (TAIR:AT5G01640.1); Has 506 Blast hits to 506 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 53; Plants - 299; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|86276 : 155.0) no description available & (reliability: 380.0) & (original description: Putative PRA1B4, Description = PRA1 family protein B4, PFAM = PF03208)' T '31.4' 'cell.vesicle transport' 'niben101scf10152_430822-442196' '(at5g58440 : 610.0) sorting nexin 2A (SNX2a); FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2B (TAIR:AT5G07120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37484 : 227.0) no description available & (gnl|cdd|72740 : 92.2) no description available & (reliability: 1220.0) & (original description: Putative SNX2B, Description = Sorting nexin 2B, PFAM = PF09325;PF00787)' T '31.4' 'cell.vesicle transport' 'niben101scf10328_134455-140877' '(at3g03800 : 260.0) member of SYP13 Gene Family; syntaxin of plants 131 (SYP131); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: intracellular protein transport, cellular membrane fusion; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 132 (TAIR:AT5G08080.1); Has 2798 Blast hits to 2798 proteins in 353 species: Archae - 4; Bacteria - 78; Metazoa - 1293; Fungi - 501; Plants - 492; Viruses - 0; Other Eukaryotes - 430 (source: NCBI BLink). & (gnl|cdd|36028 : 224.0) no description available & (gnl|cdd|29141 : 84.5) no description available & (reliability: 520.0) & (original description: Putative kn, Description = Syntaxin of plants 122 protein, PFAM = PF05739;PF00804)' T '31.4' 'cell.vesicle transport' 'niben101scf10492_5460-10916' '(at4g32150 : 345.0) AtVAMP711 is a member of Synaptobrevin-like AtVAMP7C, v-SNARE (soluble N-ethyl-maleimide sensitive factor attachment protein receptors) protein family. SNAREs have been divided into four subgroups: Qa-, Qb-, Qc- and R-SNAREs. R-SNAREs are classified into three groups, the Sec22-, YKT6- and VAMP7-like R-SNAREs. One R-SNARE and three Q-SNAREs (one of each subgroup) form the trans-SNARE complex, which governs specific membrane fusions. VAMP7 proteins consist of three distinct domain, the N-terminal longin-domain (LD), the SNARE motif (SNM) and a transmembrane domain. In spite of the high similarities among the VAMP7 proteins, they show different subcellular localizations. VAMP7C is vacuolar-localized and its LD is essential for the correct localization. Generally, it is suggested that the complete LD is the determinant of subcellular sorting in both animal and plant R-SNAREs.; vesicle-associated membrane protein 711 (VAMP711); INVOLVED IN: intermembrane transport, response to salt stress, cellular membrane fusion, response to abscisic acid stimulus, stomatal movement; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 713 (TAIR:AT5G11150.1); Has 2432 Blast hits to 2430 proteins in 266 species: Archae - 0; Bacteria - 0; Metazoa - 955; Fungi - 502; Plants - 549; Viruses - 3; Other Eukaryotes - 423 (source: NCBI BLink). & (gnl|cdd|36077 : 323.0) no description available & (gnl|cdd|85150 : 104.0) no description available & (reliability: 690.0) & (original description: Putative VAMP713, Description = Vesicle-associated membrane protein 713, PFAM = PF13774;PF00957)' T '31.4' 'cell.vesicle transport' 'niben101scf10502_83063-94809' '(at5g01430 : 180.0) Got1/Sft2-like vescicle transport protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Got1/SFT2-like (InterPro:IPR007305); BEST Arabidopsis thaliana protein match is: Got1/Sft2-like vescicle transport protein family (TAIR:AT3G49420.1). & (gnl|cdd|36954 : 131.0) no description available & (gnl|cdd|67778 : 97.9) no description available & (reliability: 360.0) & (original description: Putative Golt1b, Description = Vesicle transport protein GOT1B, PFAM = PF04178)' T '31.4' 'cell.vesicle transport' 'niben101scf10737_85622-91231' '(at4g02350 : 1119.0) Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.; exocyst complex component sec15B (SEC15B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen germination, pollen tube growth; LOCATED IN: cytosol, plasma membrane, membrane, exocyst; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exocyst complex subunit Sec15-like (InterPro:IPR007225); BEST Arabidopsis thaliana protein match is: exocyst complex component sec15A (TAIR:AT3G56640.1); Has 431 Blast hits to 427 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 167; Fungi - 138; Plants - 91; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|37387 : 780.0) no description available & (gnl|cdd|67697 : 129.0) no description available & (reliability: 2238.0) & (original description: Putative SEC15B, Description = Exocyst complex component SEC15B, PFAM = PF04091)' T '31.4' 'cell.vesicle transport' 'niben101scf10980_125058-162926' '(at5g63640 : 321.0) ENTH/VHS/GAT family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), GAT (InterPro:IPR004152), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS/GAT family protein (TAIR:AT4G32760.1); Has 1276 Blast hits to 1268 proteins in 185 species: Archae - 0; Bacteria - 4; Metazoa - 656; Fungi - 270; Plants - 272; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|36303 : 213.0) no description available & (gnl|cdd|48658 : 125.0) no description available & (reliability: 642.0) & (original description: Putative pco104183, Description = Protein transporter, PFAM = PF00790)' T '31.4' 'cell.vesicle transport' 'niben101scf11019_109177-117133' '(at5g59730 : 128.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H7 (EXO70H7); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, exocyst; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H6 (TAIR:AT1G07725.1); Has 772 Blast hits to 760 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 133; Fungi - 5; Plants - 633; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|37555 : 122.0) no description available & (gnl|cdd|86233 : 113.0) no description available & (reliability: 242.0) & (original description: Putative EXO70H1, Description = Exocyst subunit exo70 family protein, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'niben101scf11253_525705-535780' '(at5g46750 : 402.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ARF-GAP domain 9 (AGD9); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 8 (TAIR:AT4G17890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35925 : 339.0) no description available & (gnl|cdd|85433 : 147.0) no description available & (reliability: 776.0) & (original description: Putative AGD9, Description = Probable ADP-ribosylation factor GTPase-activating protein AGD9, PFAM = PF01412)' T '31.4' 'cell.vesicle transport' 'niben101scf11469_21838-26491' '(at5g39510 : 266.0) Encodes a member of SNARE gene family. Homologous with yeast VTI1 and is involved in vesicle transport. Mutant alleles such as sgr4/zig are defective in the shoots response to gravity resulting in a zigzag growth pattern of the stem. Involved in protein trafficking to lytic vacuoles. Can conditionally substitute VTI12 in protein storage vacuole trafficking when plants are devoid of VTI12.; SHOOT GRAVITROPSIM 4 (SGR4); FUNCTIONS IN: receptor activity; INVOLVED IN: gravitropism, Golgi to vacuole transport, protein targeting to vacuole; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Vesicle transport v-SNARE, N-terminal (InterPro:IPR007705); BEST Arabidopsis thaliana protein match is: vesicle transport V-snare 13 (TAIR:AT3G29100.1); Has 744 Blast hits to 742 proteins in 201 species: Archae - 0; Bacteria - 0; Metazoa - 276; Fungi - 144; Plants - 174; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|36879 : 240.0) no description available & (gnl|cdd|68577 : 114.0) no description available & (reliability: 532.0) & (original description: Putative VTI13, Description = Vesicle transport v-SNARE 13, PFAM = PF05008;PF12352)' T '31.4' 'cell.vesicle transport' 'niben101scf11688_173902-196164' '(at3g10380 : 1425.0) Subunit of the Putative Arabidopsis Exocyst Complex; subunit of exocyst complex 8 (SEC8); INVOLVED IN: pollen germination, mucilage biosynthetic process involved in seed coat development, pollen tube growth; LOCATED IN: cytosol, plasma membrane, exocyst; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec8 exocyst complex component specific domain (InterPro:IPR007191); Has 454 Blast hits to 346 proteins in 158 species: Archae - 0; Bacteria - 0; Metazoa - 232; Fungi - 133; Plants - 50; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|38895 : 111.0) no description available & (reliability: 2850.0) & (original description: Putative SEC8, Description = Exocyst complex component SEC8, PFAM = PF04048)' T '31.4' 'cell.vesicle transport' 'niben101scf11960_123841-133056' '(at1g31730 : 639.0) Adaptin family protein; FUNCTIONS IN: clathrin binding, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Adaptor protein complex AP-4, epsilon subunit (InterPro:IPR017109), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: Adaptor protein complex AP-1, gamma subunit (TAIR:AT1G60070.1); Has 4728 Blast hits to 3440 proteins in 365 species: Archae - 0; Bacteria - 98; Metazoa - 1563; Fungi - 860; Plants - 412; Viruses - 3; Other Eukaryotes - 1792 (source: NCBI BLink). & (gnl|cdd|36280 : 425.0) no description available & (gnl|cdd|85562 : 157.0) no description available & (reliability: 1278.0) & (original description: Putative AP4E, Description = Adaptor protein complex 4 subunit epsilon, PFAM = PF01602)' T '31.4' 'cell.vesicle transport' 'niben101scf11969_108857-112033' '(at3g09740 : 181.0) syntaxin of plants 71 (SYP71); syntaxin of plants 71 (SYP71); FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, protein targeting to membrane; LOCATED IN: integral to membrane, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), Syntaxin/epimorphin, conserved site (InterPro:IPR006012); BEST Arabidopsis thaliana protein match is: syntaxin of plants 72 (TAIR:AT3G45280.1); Has 541 Blast hits to 539 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 116; Plants - 188; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative SYP71, Description = Syntaxin-71, PFAM = PF05739)' T '31.4' 'cell.vesicle transport' 'niben101scf12045_735370-737993' '(gnl|cdd|38352 : 171.0) no description available & (gnl|cdd|86276 : 138.0) no description available & (at1g08770 : 118.0) prenylated RAB acceptor 1.E (PRA1.E); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: PRA1 (Prenylated rab acceptor) family protein (TAIR:AT1G55190.1); Has 522 Blast hits to 522 proteins in 132 species: Archae - 0; Bacteria - 0; Metazoa - 107; Fungi - 87; Plants - 296; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative PRA4, Description = PRA1 family protein F2, PFAM = PF03208)' T '31.4' 'cell.vesicle transport' 'niben101scf12673_216667-221992' '(at4g32150 : 347.0) AtVAMP711 is a member of Synaptobrevin-like AtVAMP7C, v-SNARE (soluble N-ethyl-maleimide sensitive factor attachment protein receptors) protein family. SNAREs have been divided into four subgroups: Qa-, Qb-, Qc- and R-SNAREs. R-SNAREs are classified into three groups, the Sec22-, YKT6- and VAMP7-like R-SNAREs. One R-SNARE and three Q-SNAREs (one of each subgroup) form the trans-SNARE complex, which governs specific membrane fusions. VAMP7 proteins consist of three distinct domain, the N-terminal longin-domain (LD), the SNARE motif (SNM) and a transmembrane domain. In spite of the high similarities among the VAMP7 proteins, they show different subcellular localizations. VAMP7C is vacuolar-localized and its LD is essential for the correct localization. Generally, it is suggested that the complete LD is the determinant of subcellular sorting in both animal and plant R-SNAREs.; vesicle-associated membrane protein 711 (VAMP711); INVOLVED IN: intermembrane transport, response to salt stress, cellular membrane fusion, response to abscisic acid stimulus, stomatal movement; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 713 (TAIR:AT5G11150.1); Has 2432 Blast hits to 2430 proteins in 266 species: Archae - 0; Bacteria - 0; Metazoa - 955; Fungi - 502; Plants - 549; Viruses - 3; Other Eukaryotes - 423 (source: NCBI BLink). & (gnl|cdd|36077 : 322.0) no description available & (gnl|cdd|85150 : 104.0) no description available & (reliability: 694.0) & (original description: Putative VAMP711, Description = Vesicle-associated membrane protein 711, PFAM = PF13774;PF00957)' T '31.4' 'cell.vesicle transport' 'niben101scf13268_13967-17876' '(at3g09520 : 588.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H4 (EXO70H4); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: stem, sperm cell, stamen, pollen tube; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H3 (TAIR:AT3G09530.1); Has 837 Blast hits to 827 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 71; Plants - 622; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|86233 : 521.0) no description available & (gnl|cdd|37555 : 517.0) no description available & (reliability: 1176.0) & (original description: Putative ACI49, Description = ACI49, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'niben101scf13268_64622-68529' '(at3g09520 : 587.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein H4 (EXO70H4); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: stem, sperm cell, stamen, pollen tube; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H3 (TAIR:AT3G09530.1); Has 837 Blast hits to 827 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 71; Plants - 622; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|37555 : 526.0) no description available & (gnl|cdd|86233 : 522.0) no description available & (reliability: 1174.0) & (original description: Putative ACI49, Description = ACI49, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'niben101scf13857_13669-19483' '(at2g32670 : 340.0) member of Synaptobrevin -like protein family; vesicle-associated membrane protein 725 (VAMP725); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: endosome, plasma membrane, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 726 (TAIR:AT1G04760.1); Has 2451 Blast hits to 2449 proteins in 264 species: Archae - 0; Bacteria - 0; Metazoa - 984; Fungi - 445; Plants - 609; Viruses - 0; Other Eukaryotes - 413 (source: NCBI BLink). & (gnl|cdd|36077 : 334.0) no description available & (gnl|cdd|85150 : 100.0) no description available & (reliability: 680.0) & (original description: Putative vamp72, Description = Putative uncharacterized protein vamp72, PFAM = PF00957;PF13774)' T '31.4' 'cell.vesicle transport' 'niben101scf14269_76976-90980' '(at4g12770 : 257.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G12780.1). & (gnl|cdd|35652 : 192.0) no description available & (gnl|cdd|70008 : 94.4) no description available & (reliability: 514.0) & (original description: Putative AUXI1, Description = Auxilin-related protein 1, PFAM = )' T '31.4' 'cell.vesicle transport' 'niben101scf14625_230568-260662' '(at1g08190 : 1399.0) Might be involved in protein sorting to the vacuole.; vacuolar protein sorting 41 (VPS41); FUNCTIONS IN: binding, nucleotide binding, zinc ion binding; INVOLVED IN: gravitropism, protein targeting to vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type (InterPro:IPR001841), WD40 repeat (InterPro:IPR001680), Vacuolar protein sorting-associated protein 41 (InterPro:IPR016902), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781), Clathrin, heavy chain/VPS, 7-fold repeat (InterPro:IPR000547); Has 13288 Blast hits to 4251 proteins in 360 species: Archae - 4; Bacteria - 340; Metazoa - 7814; Fungi - 1141; Plants - 584; Viruses - 346; Other Eukaryotes - 3059 (source: NCBI BLink). & (gnl|cdd|37277 : 935.0) no description available & (gnl|cdd|47627 : 103.0) no description available & (reliability: 2798.0) & (original description: Putative VPS41, Description = Vacuolar protein sorting-associated protein 41 homolog, PFAM = PF00637)' T '31.4' 'cell.vesicle transport' 'niben101scf14872_81590-94614' '(at4g17890 : 435.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ARF-GAP domain 8 (AGD8); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 9 (TAIR:AT5G46750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35925 : 337.0) no description available & (gnl|cdd|85433 : 143.0) no description available & (reliability: 810.0) & (original description: Putative AGD8, Description = Probable ADP-ribosylation factor GTPase-activating protein AGD8, PFAM = PF01412)' T '31.4' 'cell.vesicle transport' 'niben101scf15227_16876-24018' '(at5g46860 : 290.0) Syntaxin-related protein required for vacuolar assembly. A member of t-SNARE superfamily, homologous to yest Vam3p. Localized in the vacuolar membranes. The protein has a heptad repeat structure (residues164ñ220) in which hydrophobic amino acid residues appear at seven amino acid intervals. Such regions have a high potential to form an amphiphilic a-helix, intriguing for the intermolecular interactions by forming coiled-coil structure. AtVam3p has a highly hydrophobic segment at its C terminus thus implicating it to be a membrane protein while the rest of the sequence is hydrophilic.; VACUOLAR MORPHOLOGY 3 (VAM3); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: in 7 processes; LOCATED IN: late endosome, trans-Golgi network transport vesicle, plant-type vacuole membrane, vacuole, plant-type vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 23 (TAIR:AT4G17730.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36029 : 189.0) no description available & (gnl|cdd|29141 : 84.9) no description available & (reliability: 580.0) & (original description: Putative SYP22, Description = Syntaxin-22, PFAM = PF05739;PF14523)' T '31.4' 'cell.vesicle transport' 'niben101scf15326_5570-22531' '(at2g36900 : 233.0) member of Membrin Gene Family; membrin 11 (MEMB11); BEST Arabidopsis thaliana protein match is: membrin 12 (TAIR:AT5G50440.1); Has 361 Blast hits to 361 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 72; Plants - 103; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|38461 : 173.0) no description available & (gnl|cdd|68577 : 98.9) no description available & (reliability: 466.0) & (original description: Putative MEMB11, Description = Membrin-11, PFAM = PF12352)' T '31.4' 'cell.vesicle transport' 'niben101scf15972_353089-356478' '(at5g61010 : 272.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein E2 (EXO70E2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, exocyst; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein E1 (TAIR:AT3G29400.1); Has 800 Blast hits to 794 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 141; Fungi - 13; Plants - 637; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|37555 : 197.0) no description available & (gnl|cdd|86233 : 135.0) no description available & (reliability: 540.0) & (original description: Putative BnaC02g37970D, Description = Exocyst complex component 7, PFAM = PF03081)' T '31.4' 'cell.vesicle transport' 'niben101scf16114_152050-175551' '(at5g12370 : 989.0) exocyst complex component sec10 (SEC10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: exocytosis, vesicle docking; LOCATED IN: plasma membrane, membrane, exocyst; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exocyst complex component Sec10 (InterPro:IPR009976); Has 533 Blast hits to 489 proteins in 174 species: Archae - 0; Bacteria - 6; Metazoa - 178; Fungi - 253; Plants - 59; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (q2qv94|exoc5_orysa : 893.0) Exocyst complex component 5 (Exocyst complex component Sec10) - Oryza sativa (Rice) & (gnl|cdd|70844 : 537.0) no description available & (gnl|cdd|38949 : 157.0) no description available & (reliability: 1978.0) & (original description: Putative SEC10, Description = Exocyst complex component 5, PFAM = PF07393;PF07393)' T '31.4' 'cell.vesicle transport' 'niben101scf17221_13225-29320' '(at1g51740 : 342.0) member of SYP8 Gene Family; syntaxin of plants 81 (SYP81); INVOLVED IN: vesicle-mediated transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: t-SNARE (InterPro:IPR010989), SNARE-complex protein Syntaxin-18 N-terminal (InterPro:IPR019529); Has 429 Blast hits to 426 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 200; Fungi - 82; Plants - 110; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|39097 : 222.0) no description available & (reliability: 684.0) & (original description: Putative SYP81, Description = Syntaxin-81, PFAM = PF10496)' T '31.4' 'cell.vesicle transport' 'niben101scf18014_1042-10372' '(at5g51430 : 1099.0) Encodes a protein that is homologous to Cog7, a subunit of the conserved oligomeric Golgi (COG) complex, which is required for the normal morphology and function of the Golgi apparatus. It is likely to be involved in transport or retention of Golgi-localized proteins and in maintenance of Golgi morphology.; EMBRYO YELLOW (EYE); CONTAINS InterPro DOMAIN/s: Conserved oligomeric Golgi complex, subunit 7 (InterPro:IPR019335); Has 231 Blast hits to 215 proteins in 93 species: Archae - 2; Bacteria - 0; Metazoa - 129; Fungi - 18; Plants - 50; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|39384 : 897.0) no description available & (reliability: 2198.0) & (original description: Putative EYE, Description = COG complex component-related protein, PFAM = PF10191)' T '31.4' 'cell.vesicle transport' 'niben101scf18014_21844-33312' '(at3g17440 : 388.0) member of NPSN Gene Family; novel plant snare 13 (NPSN13); FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: novel plant snare 12 (TAIR:AT1G48240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 776.0) & (original description: Putative NPSN13, Description = Novel plant SNARE 13, PFAM = PF03908)' T '31.4' 'cell.vesicle transport' 'niben101scf18080_291629-294301' '(at5g12370 : 154.0) exocyst complex component sec10 (SEC10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: exocytosis, vesicle docking; LOCATED IN: plasma membrane, membrane, exocyst; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exocyst complex component Sec10 (InterPro:IPR009976); Has 533 Blast hits to 489 proteins in 174 species: Archae - 0; Bacteria - 6; Metazoa - 178; Fungi - 253; Plants - 59; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (q2qv94|exoc5_orysa : 124.0) Exocyst complex component 5 (Exocyst complex component Sec10) - Oryza sativa (Rice) & (gnl|cdd|70844 : 92.7) no description available & (reliability: 308.0) & (original description: Putative SEC10, Description = Exocyst complex component 5, PFAM = PF07393)' T '31.4' 'cell.vesicle transport' 'niben101scf19171_255970-263515' '(at3g22845 : 357.0) emp24/gp25L/p24 family/GOLD family protein; INVOLVED IN: transport; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT3G07680.1); Has 1821 Blast hits to 1821 proteins in 239 species: Archae - 0; Bacteria - 0; Metazoa - 918; Fungi - 476; Plants - 264; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|36905 : 210.0) no description available & (reliability: 714.0) & (original description: Putative At3g22845, Description = Transmembrane emp24 domain-containing protein p24beta3, PFAM = PF01105)' T '31.4' 'cell.vesicle transport' 'niben101scf19911_49108-54014' '(at1g48760 : 714.0) delta-adaptin (delta-ADR); FUNCTIONS IN: protein transporter activity, clathrin binding, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, Golgi apparatus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Adaptor protein complex AP-3, delta subunit (InterPro:IPR017105), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: Adaptor protein complex AP-1, gamma subunit (TAIR:AT1G60070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36277 : 612.0) no description available & (gnl|cdd|85562 : 225.0) no description available & (reliability: 1428.0) & (original description: Putative ap3d1, Description = AP-3 complex subunit delta, PFAM = PF01602)' T '31.4' 'cell.vesicle transport' 'niben101scf29098_9760-17436' '(at3g03800 : 328.0) member of SYP13 Gene Family; syntaxin of plants 131 (SYP131); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: intracellular protein transport, cellular membrane fusion; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 132 (TAIR:AT5G08080.1); Has 2798 Blast hits to 2798 proteins in 353 species: Archae - 4; Bacteria - 78; Metazoa - 1293; Fungi - 501; Plants - 492; Viruses - 0; Other Eukaryotes - 430 (source: NCBI BLink). & (gnl|cdd|36028 : 252.0) no description available & (gnl|cdd|29141 : 110.0) no description available & (reliability: 656.0) & (original description: Putative kn, Description = Syntaxin of plants 122 protein, PFAM = PF00804;PF05739)' T '31.4' 'cell.vesicle transport' 'niben101scf34081_105214-108595' '(at2g18260 : 304.0) member of SYP11 Gene Family; syntaxin of plants 112 (SYP112); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: intracellular protein transport, response to cold, cellular membrane fusion; LOCATED IN: nucleus; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 111 (TAIR:AT1G08560.1); Has 1733 Blast hits to 1731 proteins in 229 species: Archae - 0; Bacteria - 19; Metazoa - 889; Fungi - 210; Plants - 409; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|36028 : 172.0) no description available & (gnl|cdd|29141 : 100.0) no description available & (reliability: 608.0) & (original description: Putative SYP112, Description = Syntaxin-112, PFAM = PF05739;PF00804)' T '31.5' 'cell.cell death' '' '' '31.5.1' 'cell.cell death.plants' 'nbv0.3scaffold35468_10695-15776' '(at5g64830 : 293.0) programmed cell death 2 C-terminal domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: apoptosis; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Programmed cell death protein 2, C-terminal (InterPro:IPR007320); BEST Arabidopsis thaliana protein match is: zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein (TAIR:AT4G02220.1); Has 591 Blast hits to 590 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 244; Fungi - 141; Plants - 96; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). & (gnl|cdd|37272 : 227.0) no description available & (reliability: 586.0) & (original description: Putative BnaC03g49430D, Description = BnaC03g49430D protein, PFAM = PF04194)' T '31.5.1' 'cell.cell death.plants' 'niben044scf00017233ctg005_4420-10370' '(at3g44880 : 520.0) Encodes a pheide a oxygenase (PAO). Accelerated cell death (acd1) mutants show rapid, spreading necrotic responses to both virulent and avirulent Pseudomonas syringae pv. maculicola or pv. tomato pathogens and to ethylene.; ACCELERATED CELL DEATH 1 (ACD1); FUNCTIONS IN: iron-sulfur cluster binding, pheophorbide a oxygenase activity; INVOLVED IN: flower development, cell death, chlorophyll catabolic process, defense response to bacterium, incompatible interaction, fruit development; LOCATED IN: chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Pheophorbide a oxygenase (InterPro:IPR013626); BEST Arabidopsis thaliana protein match is: ACD1-like (TAIR:AT4G25650.1); Has 4072 Blast hits to 4065 proteins in 685 species: Archae - 4; Bacteria - 2839; Metazoa - 50; Fungi - 15; Plants - 409; Viruses - 0; Other Eukaryotes - 755 (source: NCBI BLink). & (gnl|cdd|58550 : 225.0) no description available & (reliability: 1040.0) & (original description: Putative PAO, Description = Pheophorbide a oxygenase, PFAM = PF00355;PF08417)' T '31.5.1' 'cell.cell death.plants' 'niben044scf00017233ctg008_793-3500' '(at3g44880 : 271.0) Encodes a pheide a oxygenase (PAO). Accelerated cell death (acd1) mutants show rapid, spreading necrotic responses to both virulent and avirulent Pseudomonas syringae pv. maculicola or pv. tomato pathogens and to ethylene.; ACCELERATED CELL DEATH 1 (ACD1); FUNCTIONS IN: iron-sulfur cluster binding, pheophorbide a oxygenase activity; INVOLVED IN: flower development, cell death, chlorophyll catabolic process, defense response to bacterium, incompatible interaction, fruit development; LOCATED IN: chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Pheophorbide a oxygenase (InterPro:IPR013626); BEST Arabidopsis thaliana protein match is: ACD1-like (TAIR:AT4G25650.1); Has 4072 Blast hits to 4065 proteins in 685 species: Archae - 4; Bacteria - 2839; Metazoa - 50; Fungi - 15; Plants - 409; Viruses - 0; Other Eukaryotes - 755 (source: NCBI BLink). & (reliability: 542.0) & (original description: Putative lls1, Description = Pheophorbide a oxygenase, PFAM = PF08417)' T '31.5.1' 'cell.cell death.plants' 'niben101scf00103_66536-72964' '(at1g29690 : 709.0) Encodes a protein containing a domain with significant homology to the MACPF (membrane attack complex and perforin) domain of complements and perforin proteins that are involved in innate immunity in animals. Transgenic cad1-1 mutant plants show lesions seen in the hypersensitive response, as well as a spontaneous activation of expression of pathogenesis-related genes and leading to a 32-fold increase in salicylic acid (SA). CAD1 is postulated to act as a negative regulator controlling SA-mediated pathway of programmed cell death in plant immunity.; constitutively activated cell death 1 (CAD1); CONTAINS InterPro DOMAIN/s: Membrane attack complex component/perforin (MACPF) domain (InterPro:IPR020864); BEST Arabidopsis thaliana protein match is: MAC/Perforin domain-containing protein (TAIR:AT4G24290.2); Has 226 Blast hits to 225 proteins in 30 species: Archae - 0; Bacteria - 6; Metazoa - 14; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|85702 : 88.2) no description available & (reliability: 1418.0) & (original description: Putative CAD1, Description = MACPF domain-containing protein CAD1, PFAM = PF01823)' T '31.5.1' 'cell.cell death.plants' 'niben101scf00436_1028477-1039577' '(at3g44880 : 785.0) Encodes a pheide a oxygenase (PAO). Accelerated cell death (acd1) mutants show rapid, spreading necrotic responses to both virulent and avirulent Pseudomonas syringae pv. maculicola or pv. tomato pathogens and to ethylene.; ACCELERATED CELL DEATH 1 (ACD1); FUNCTIONS IN: iron-sulfur cluster binding, pheophorbide a oxygenase activity; INVOLVED IN: flower development, cell death, chlorophyll catabolic process, defense response to bacterium, incompatible interaction, fruit development; LOCATED IN: chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Pheophorbide a oxygenase (InterPro:IPR013626); BEST Arabidopsis thaliana protein match is: ACD1-like (TAIR:AT4G25650.1); Has 4072 Blast hits to 4065 proteins in 685 species: Archae - 4; Bacteria - 2839; Metazoa - 50; Fungi - 15; Plants - 409; Viruses - 0; Other Eukaryotes - 755 (source: NCBI BLink). & (gnl|cdd|58550 : 233.0) no description available & (q9zwm5|cao_chlre : 83.2) Chlorophyllide a oxygenase, chloroplast precursor (EC 1.13.12.14) (Chlorophyll a oxygenase) (Chlorophyll b synthase) - Chlamydomonas reinhardtii & (reliability: 1570.0) & (original description: Putative PAO, Description = Pheophorbide a oxygenase, chloroplastic, PFAM = PF00355;PF08417)' T '31.5.1' 'cell.cell death.plants' 'niben101scf01061_370569-377687' '(at2g34690 : 284.0) Gene product transports the glycolipid precursor sphingosine between membranes in vitro. Mutant constitutively expresses defense-related genes that accompany the hypersensitive response normally triggered by avirulent pathogens.; ACCELERATED CELL DEATH 11 (ACD11); FUNCTIONS IN: sphingosine transmembrane transporter activity; INVOLVED IN: cell death, defense response to bacterium, incompatible interaction, response to salicylic acid stimulus; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: Glycolipid transfer protein (GLTP) family protein (TAIR:AT4G39670.1); Has 490 Blast hits to 489 proteins in 97 species: Archae - 0; Bacteria - 0; Metazoa - 282; Fungi - 29; Plants - 164; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|39391 : 215.0) no description available & (gnl|cdd|87613 : 165.0) no description available & (reliability: 568.0) & (original description: Putative ACD11, Description = Accelerated cell death 11, PFAM = PF08718)' T '31.5.1' 'cell.cell death.plants' 'niben101scf01395_452266-459068' '(at2g34690 : 285.0) Gene product transports the glycolipid precursor sphingosine between membranes in vitro. Mutant constitutively expresses defense-related genes that accompany the hypersensitive response normally triggered by avirulent pathogens.; ACCELERATED CELL DEATH 11 (ACD11); FUNCTIONS IN: sphingosine transmembrane transporter activity; INVOLVED IN: cell death, defense response to bacterium, incompatible interaction, response to salicylic acid stimulus; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: Glycolipid transfer protein (GLTP) family protein (TAIR:AT4G39670.1); Has 490 Blast hits to 489 proteins in 97 species: Archae - 0; Bacteria - 0; Metazoa - 282; Fungi - 29; Plants - 164; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|39391 : 215.0) no description available & (gnl|cdd|87613 : 165.0) no description available & (reliability: 570.0) & (original description: Putative ACD11, Description = Accelerated cell death 11, PFAM = PF08718)' T '31.5.1' 'cell.cell death.plants' 'niben101scf01691_127663-134708' '(at1g29690 : 829.0) Encodes a protein containing a domain with significant homology to the MACPF (membrane attack complex and perforin) domain of complements and perforin proteins that are involved in innate immunity in animals. Transgenic cad1-1 mutant plants show lesions seen in the hypersensitive response, as well as a spontaneous activation of expression of pathogenesis-related genes and leading to a 32-fold increase in salicylic acid (SA). CAD1 is postulated to act as a negative regulator controlling SA-mediated pathway of programmed cell death in plant immunity.; constitutively activated cell death 1 (CAD1); CONTAINS InterPro DOMAIN/s: Membrane attack complex component/perforin (MACPF) domain (InterPro:IPR020864); BEST Arabidopsis thaliana protein match is: MAC/Perforin domain-containing protein (TAIR:AT4G24290.2); Has 226 Blast hits to 225 proteins in 30 species: Archae - 0; Bacteria - 6; Metazoa - 14; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|85702 : 96.3) no description available & (reliability: 1658.0) & (original description: Putative CAD1, Description = MACPF domain-containing protein CAD1, PFAM = PF01823)' T '31.5.1' 'cell.cell death.plants' 'niben101scf03437_288777-293990' '(at5g23040 : 319.0) Cell growth defect factor 1.Causes Bax mediated lethality in yeast by generating reactive oxygen species and this effect is suppressed by AtBI-1.; CELL GROWTH DEFECT FACTOR 1 (CDF1); INVOLVED IN: cell death; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: shoot, flower, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3353 (InterPro:IPR021788); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3353) (TAIR:AT3G51140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 638.0) & (original description: Putative CPP1, Description = Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic, PFAM = PF11833)' T '31.5.1' 'cell.cell death.plants' 'niben101scf04914_114263-121847' '(at1g29690 : 834.0) Encodes a protein containing a domain with significant homology to the MACPF (membrane attack complex and perforin) domain of complements and perforin proteins that are involved in innate immunity in animals. Transgenic cad1-1 mutant plants show lesions seen in the hypersensitive response, as well as a spontaneous activation of expression of pathogenesis-related genes and leading to a 32-fold increase in salicylic acid (SA). CAD1 is postulated to act as a negative regulator controlling SA-mediated pathway of programmed cell death in plant immunity.; constitutively activated cell death 1 (CAD1); CONTAINS InterPro DOMAIN/s: Membrane attack complex component/perforin (MACPF) domain (InterPro:IPR020864); BEST Arabidopsis thaliana protein match is: MAC/Perforin domain-containing protein (TAIR:AT4G24290.2); Has 226 Blast hits to 225 proteins in 30 species: Archae - 0; Bacteria - 6; Metazoa - 14; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|85702 : 93.6) no description available & (reliability: 1668.0) & (original description: Putative CAD1, Description = MACPF domain-containing protein CAD1, PFAM = PF01823)' T '31.5.1' 'cell.cell death.plants' 'niben101scf13203_227509-244197' '(at1g29690 : 697.0) Encodes a protein containing a domain with significant homology to the MACPF (membrane attack complex and perforin) domain of complements and perforin proteins that are involved in innate immunity in animals. Transgenic cad1-1 mutant plants show lesions seen in the hypersensitive response, as well as a spontaneous activation of expression of pathogenesis-related genes and leading to a 32-fold increase in salicylic acid (SA). CAD1 is postulated to act as a negative regulator controlling SA-mediated pathway of programmed cell death in plant immunity.; constitutively activated cell death 1 (CAD1); CONTAINS InterPro DOMAIN/s: Membrane attack complex component/perforin (MACPF) domain (InterPro:IPR020864); BEST Arabidopsis thaliana protein match is: MAC/Perforin domain-containing protein (TAIR:AT4G24290.2); Has 226 Blast hits to 225 proteins in 30 species: Archae - 0; Bacteria - 6; Metazoa - 14; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|85702 : 86.3) no description available & (reliability: 1394.0) & (original description: Putative CAD1, Description = MACPF domain-containing protein CAD1, PFAM = PF01823)' T '31.5.2' 'cell.cell death.apoptosis' '' '' '31.6' 'cell.motility' '' '' '31.6.1' 'cell.motility.eukaryotes' '' '' '31.6.1.1' 'cell.motility.eukaryotes.basal bodies' '' '' '31.6.1.2' 'cell.motility.eukaryotes.deflagellation' '' '' '31.6.1.3' 'cell.motility.eukaryotes.intraflagellar transport' '' '' '31.6.1.3.1' 'cell.motility.eukaryotes.intraflagellar transport.IFT motor protein' '' '' '31.6.1.3.1.1' 'cell.motility.eukaryotes.intraflagellar transport.IFT motor protein.kinesin-2 subunits' '' '' '31.6.1.3.1.2' 'cell.motility.eukaryotes.intraflagellar transport.IFT motor protein.cytoplasmic dynein 1b subunits' '' '' '31.6.1.3.2' 'cell.motility.eukaryotes.intraflagellar transport.IFT particle protein' '' '' '31.6.1.3.2.1' 'cell.motility.eukaryotes.intraflagellar transport.IFT particle protein.complex A' '' '' '31.6.1.3.2.2' 'cell.motility.eukaryotes.intraflagellar transport.IFT particle protein.complex B' '' '' '31.6.1.4' 'cell.motility.eukaryotes.axonemal dyneins' '' '' '31.6.1.4.1' 'cell.motility.eukaryotes.axonemal dyneins.outer arm' '' '' '31.6.1.4.2' 'cell.motility.eukaryotes.axonemal dyneins.inner arm' '' '' '31.6.1.4.2.1' 'cell.motility.eukaryotes.axonemal dyneins.inner arm.monomeric species' '' '' '31.6.1.5' 'cell.motility.eukaryotes.radial spoke' '' '' '31.6.1.5.1' 'cell.motility.eukaryotes.radial spoke.head' '' '' '31.6.1.5.2' 'cell.motility.eukaryotes.radial spoke.stalk' '' '' '31.6.1.6' 'cell.motility.eukaryotes.central pair' '' '' '31.6.1.6.1' 'cell.motility.eukaryotes.central pair.C1a' '' '' '31.6.1.6.2' 'cell.motility.eukaryotes.central pair.C1b' '' '' '31.6.1.6.3' 'cell.motility.eukaryotes.central pair.C1' '' '' '31.6.1.6.4' 'cell.motility.eukaryotes.central pair.C2b' '' '' '31.6.1.6.5' 'cell.motility.eukaryotes.central pair.C2c' '' '' '31.6.1.6.6' 'cell.motility.eukaryotes.central pair.C1-C2 bridge' '' '' '31.6.1.7' 'cell.motility.eukaryotes.dynein regulatory complex (DRC)' '' '' '31.6.1.8' 'cell.motility.eukaryotes.flagellar membrane proteins' '' '' '31.6.1.9' 'cell.motility.eukaryotes.flagellar adhesion and gamete fusion' '' '' '31.6.1.10' 'cell.motility.eukaryotes.flagellar associated proteins' '' '' '31.6.1.11' 'cell.motility.eukaryotes.other' '' '' '31.6.2' 'cell.motility.prokaryotes' '' '' '31.7' 'cell.development' '' '' '31.7.1' 'cell.development.zygote' '' '' '31.8' 'cell.contractile vacuole' '' '' '31.9' 'cell.eyespot' '' '' '31.99' 'cell.unspecified' 'nbv0.3scaffold1222_80163-85295' '(gnl|cdd|37450 : 189.0) no description available & (at3g12390 : 155.0) Nascent polypeptide-associated complex (NAC), alpha subunit family protein; INVOLVED IN: response to salt stress; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: nascent polypeptide-associated complex subunit alpha-like protein 3 (TAIR:AT5G13850.1); Has 5275 Blast hits to 2514 proteins in 367 species: Archae - 69; Bacteria - 684; Metazoa - 1880; Fungi - 785; Plants - 552; Viruses - 60; Other Eukaryotes - 1245 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative aic, Description = Nascent polypeptide-associated complex subunit alpha, PFAM = PF01849)' T '31.99' 'cell.unspecified' 'nbv0.5scaffold4377_182250-196720' '(at3g08850 : 1511.0) Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive.; RAPTOR1; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), WD40 repeat (InterPro:IPR001680), Regulatory associated protein of TOR (InterPro:IPR004083), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: HEAT repeat ;WD domain, G-beta repeat protein protein (TAIR:AT5G01770.1); Has 7799 Blast hits to 6065 proteins in 379 species: Archae - 2; Bacteria - 1590; Metazoa - 2741; Fungi - 1618; Plants - 862; Viruses - 0; Other Eukaryotes - 986 (source: NCBI BLink). & (gnl|cdd|36730 : 1289.0) no description available & (reliability: 2852.0) & (original description: Putative RAPTOR1, Description = Regulatory-associated protein of TOR 1, PFAM = PF14538)' T '31.99' 'cell.unspecified' 'niben044scf00002474ctg006_1-4282' '(at3g08850 : 225.0) Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive.; RAPTOR1; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), WD40 repeat (InterPro:IPR001680), Regulatory associated protein of TOR (InterPro:IPR004083), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: HEAT repeat ;WD domain, G-beta repeat protein protein (TAIR:AT5G01770.1); Has 7799 Blast hits to 6065 proteins in 379 species: Archae - 2; Bacteria - 1590; Metazoa - 2741; Fungi - 1618; Plants - 862; Viruses - 0; Other Eukaryotes - 986 (source: NCBI BLink). & (gnl|cdd|36730 : 169.0) no description available & (reliability: 440.0) & (original description: Putative RAPTOR1, Description = Regulatory-associated protein of TOR 1, PFAM = )' T '31.99' 'cell.unspecified' 'niben101scf00077_16422-21554' '(gnl|cdd|37450 : 162.0) no description available & (at3g12390 : 140.0) Nascent polypeptide-associated complex (NAC), alpha subunit family protein; INVOLVED IN: response to salt stress; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: nascent polypeptide-associated complex subunit alpha-like protein 3 (TAIR:AT5G13850.1); Has 5275 Blast hits to 2514 proteins in 367 species: Archae - 69; Bacteria - 684; Metazoa - 1880; Fungi - 785; Plants - 552; Viruses - 60; Other Eukaryotes - 1245 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative aic, Description = Nascent polypeptide-associated complex subunit alpha, PFAM = PF01849)' T '31.99' 'cell.unspecified' 'niben101scf06754_33066-38092' '(gnl|cdd|37450 : 187.0) no description available & (at3g12390 : 152.0) Nascent polypeptide-associated complex (NAC), alpha subunit family protein; INVOLVED IN: response to salt stress; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: nascent polypeptide-associated complex subunit alpha-like protein 3 (TAIR:AT5G13850.1); Has 5275 Blast hits to 2514 proteins in 367 species: Archae - 69; Bacteria - 684; Metazoa - 1880; Fungi - 785; Plants - 552; Viruses - 60; Other Eukaryotes - 1245 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative aic, Description = Nascent polypeptide-associated complex subunit alpha, PFAM = PF01849)' T '31.99' 'cell.unspecified' 'niben101scf07023_465925-470130' '(gnl|cdd|37450 : 191.0) no description available & (at3g12390 : 175.0) Nascent polypeptide-associated complex (NAC), alpha subunit family protein; INVOLVED IN: response to salt stress; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: nascent polypeptide-associated complex subunit alpha-like protein 3 (TAIR:AT5G13850.1); Has 5275 Blast hits to 2514 proteins in 367 species: Archae - 69; Bacteria - 684; Metazoa - 1880; Fungi - 785; Plants - 552; Viruses - 60; Other Eukaryotes - 1245 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative aic, Description = Nascent polypeptide-associated complex subunit alpha, PFAM = PF01849)' T '31.99' 'cell.unspecified' 'niben101scf09141_120096-141491' '(at3g08850 : 1830.0) Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive.; RAPTOR1; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), WD40 repeat (InterPro:IPR001680), Regulatory associated protein of TOR (InterPro:IPR004083), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: HEAT repeat ;WD domain, G-beta repeat protein protein (TAIR:AT5G01770.1); Has 7799 Blast hits to 6065 proteins in 379 species: Archae - 2; Bacteria - 1590; Metazoa - 2741; Fungi - 1618; Plants - 862; Viruses - 0; Other Eukaryotes - 986 (source: NCBI BLink). & (gnl|cdd|36730 : 1539.0) no description available & (gnl|cdd|29257 : 89.3) no description available & (reliability: 3480.0) & (original description: Putative mip1, Description = Regulatory-associated protein of mTOR, PFAM = PF14538;PF00400)' T '31.99' 'cell.unspecified' 'niben101scf09141_120114-136721' '(at3g08850 : 1555.0) Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive.; RAPTOR1; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), WD40 repeat (InterPro:IPR001680), Regulatory associated protein of TOR (InterPro:IPR004083), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: HEAT repeat ;WD domain, G-beta repeat protein protein (TAIR:AT5G01770.1); Has 7799 Blast hits to 6065 proteins in 379 species: Archae - 2; Bacteria - 1590; Metazoa - 2741; Fungi - 1618; Plants - 862; Viruses - 0; Other Eukaryotes - 986 (source: NCBI BLink). & (gnl|cdd|36730 : 1331.0) no description available & (reliability: 2958.0) & (original description: Putative mip1, Description = Regulatory-associated protein of mTOR, PFAM = PF14538)' T '31.99' 'cell.unspecified' 'niben101scf09141_121422-139593' '(at3g08850 : 1536.0) Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive.; RAPTOR1; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), WD40 repeat (InterPro:IPR001680), Regulatory associated protein of TOR (InterPro:IPR004083), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: HEAT repeat ;WD domain, G-beta repeat protein protein (TAIR:AT5G01770.1); Has 7799 Blast hits to 6065 proteins in 379 species: Archae - 2; Bacteria - 1590; Metazoa - 2741; Fungi - 1618; Plants - 862; Viruses - 0; Other Eukaryotes - 986 (source: NCBI BLink). & (gnl|cdd|36730 : 1341.0) no description available & (reliability: 2952.0) & (original description: Putative mip1, Description = Regulatory-associated protein of mTOR, PFAM = PF14538)' T '31.99' 'cell.unspecified' 'niben101scf12202_43628-63096' '(at3g08850 : 1925.0) Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive.; RAPTOR1; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), WD40 repeat (InterPro:IPR001680), Regulatory associated protein of TOR (InterPro:IPR004083), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: HEAT repeat ;WD domain, G-beta repeat protein protein (TAIR:AT5G01770.1); Has 7799 Blast hits to 6065 proteins in 379 species: Archae - 2; Bacteria - 1590; Metazoa - 2741; Fungi - 1618; Plants - 862; Viruses - 0; Other Eukaryotes - 986 (source: NCBI BLink). & (gnl|cdd|36730 : 1600.0) no description available & (gnl|cdd|29257 : 101.0) no description available & (reliability: 3622.0) & (original description: Putative mip1, Description = Regulatory-associated protein of mTOR, PFAM = PF14538)' T '31.99' 'cell.unspecified' 'niben101scf14697_261214-265468' '(gnl|cdd|37450 : 191.0) no description available & (at3g12390 : 174.0) Nascent polypeptide-associated complex (NAC), alpha subunit family protein; INVOLVED IN: response to salt stress; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: nascent polypeptide-associated complex subunit alpha-like protein 3 (TAIR:AT5G13850.1); Has 5275 Blast hits to 2514 proteins in 367 species: Archae - 69; Bacteria - 684; Metazoa - 1880; Fungi - 785; Plants - 552; Viruses - 60; Other Eukaryotes - 1245 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative aic, Description = Nascent polypeptide-associated complex subunit alpha, PFAM = PF01849)' T '32' 'micro RNA, natural antisense etc' 'nbv0.5scaffold128_589726-598217' '(at3g20550 : 221.0) Encodes a nuclear localized FHA (forhkead) domain containing protein.Mutant plants have shortened roots, delayed flowering time, altered floral organ number, defective floral organs and reduced fertility.Ddl mutants also show reduced levels of pri-miRNAs as well as mature miRNAs suggesting involvement in biogenesis of miRNAs. DDL does not affect transcription of miRNAs directly but may act through other proteins such as DCL.; DAWDLE (DDL); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell proliferation, production of miRNAs involved in gene silencing by miRNA; LOCATED IN: cytosol, nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24410.1); Has 20960 Blast hits to 11868 proteins in 728 species: Archae - 18; Bacteria - 1126; Metazoa - 10847; Fungi - 2610; Plants - 1671; Viruses - 61; Other Eukaryotes - 4627 (source: NCBI BLink). & (gnl|cdd|37093 : 164.0) no description available & (gnl|cdd|28942 : 82.4) no description available & (reliability: 442.0) & (original description: Putative DDL, Description = FHA domain-containing protein DDL, PFAM = PF00498)' T '32' 'micro RNA, natural antisense etc' 'niben101scf04339_431485-442482' '(at3g20550 : 197.0) Encodes a nuclear localized FHA (forhkead) domain containing protein.Mutant plants have shortened roots, delayed flowering time, altered floral organ number, defective floral organs and reduced fertility.Ddl mutants also show reduced levels of pri-miRNAs as well as mature miRNAs suggesting involvement in biogenesis of miRNAs. DDL does not affect transcription of miRNAs directly but may act through other proteins such as DCL.; DAWDLE (DDL); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell proliferation, production of miRNAs involved in gene silencing by miRNA; LOCATED IN: cytosol, nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24410.1); Has 20960 Blast hits to 11868 proteins in 728 species: Archae - 18; Bacteria - 1126; Metazoa - 10847; Fungi - 2610; Plants - 1671; Viruses - 61; Other Eukaryotes - 4627 (source: NCBI BLink). & (gnl|cdd|37093 : 149.0) no description available & (reliability: 394.0) & (original description: Putative snip1, Description = Smad nuclear-interacting protein 1, PFAM = PF00498)' T '32' 'micro RNA, natural antisense etc' 'niben101scf04339_439506-442094' '(at3g20550 : 157.0) Encodes a nuclear localized FHA (forhkead) domain containing protein.Mutant plants have shortened roots, delayed flowering time, altered floral organ number, defective floral organs and reduced fertility.Ddl mutants also show reduced levels of pri-miRNAs as well as mature miRNAs suggesting involvement in biogenesis of miRNAs. DDL does not affect transcription of miRNAs directly but may act through other proteins such as DCL.; DAWDLE (DDL); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell proliferation, production of miRNAs involved in gene silencing by miRNA; LOCATED IN: cytosol, nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24410.1); Has 20960 Blast hits to 11868 proteins in 728 species: Archae - 18; Bacteria - 1126; Metazoa - 10847; Fungi - 2610; Plants - 1671; Viruses - 61; Other Eukaryotes - 4627 (source: NCBI BLink). & (gnl|cdd|37093 : 147.0) no description available & (reliability: 314.0) & (original description: Putative snip1, Description = Smad nuclear-interacting protein 1, PFAM = PF00498)' T '33' 'development' '' '' '33.1' 'development.storage proteins' 'nbv0.3scaffold19975_11626-15252' '(p07728|glua1_orysa : 332.0) Glutelin type-A 1 precursor (Glutelin type I) [Contains: Glutelin type-A 1 acidic chain; Glutelin type-A 1 basic chain] - Oryza sativa (Rice) & (at5g44120 : 304.0) Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene, CRA2, which is located tandemly with CRA1. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; CRUCIFERINA (CRA1); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell, seed; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: 11-S seed storage protein, conserved site (InterPro:IPR022379), Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), 11-S seed storage protein, plant (InterPro:IPR006044); BEST Arabidopsis thaliana protein match is: cruciferin 2 (TAIR:AT1G03880.1); Has 1047 Blast hits to 1009 proteins in 168 species: Archae - 0; Bacteria - 115; Metazoa - 2; Fungi - 0; Plants - 930; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|84597 : 100.0) no description available & (reliability: 608.0) & (original description: Putative leg4, Description = Legumin A, PFAM = PF00190;PF00190)' T '33.1' 'development.storage proteins' 'nbv0.3scaffold20679_29271-33006' '(at5g04040 : 599.0) Encodes a triacylglycerol lipase that is involved in storage lipid breakdown during seed germination. The mutant plant exhibits a much slower rate of postgerminative growth than the wild type.; SUGAR-DEPENDENT1 (SDP1); CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Protein of unknown function DUF3336 (InterPro:IPR021771), ARF/SAR superfamily (InterPro:IPR006689), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: sugar-dependent 1-like (TAIR:AT3G57140.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37425 : 308.0) no description available & (reliability: 1198.0) & (original description: Putative SDP1, Description = Triacylglycerol lipase SDP1, PFAM = )' T '33.1' 'development.storage proteins' 'nbv0.3scaffold21525_1793-8441' '(at2g26560 : 515.0) Encodes a lipid acyl hydrolase with wide substrate specificity that accumulates upon infection by fungal and bacterial pathogens. Protein is localized in the cytoplasm in healthy leaves, and in membranes in infected cells. Plays a role in cell death and differentially affects the accumulation of oxylipins. Contributes to resistance to virus.; phospholipase A 2A (PLA2A); FUNCTIONS IN: lipase activity, nutrient reservoir activity; INVOLVED IN: in 6 processes; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein (TAIR:AT4G37070.2); Has 2114 Blast hits to 2104 proteins in 375 species: Archae - 0; Bacteria - 479; Metazoa - 231; Fungi - 198; Plants - 897; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (p11768|pat3_soltu : 318.0) Patatin class 1 precursor (Patatin class I) (Potato tuber protein) - Solanum tuberosum (Potato) & (gnl|cdd|35733 : 270.0) no description available & (gnl|cdd|85637 : 154.0) no description available & (reliability: 1030.0) & (original description: Putative PLP1, Description = Patatin-like protein 1, PFAM = PF01734)' T '33.1' 'development.storage proteins' 'nbv0.3scaffold35825_3280-9713' '(at1g33270 : 411.0) Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Patatin (InterPro:IPR002641); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38977 : 153.0) no description available & (reliability: 822.0) & (original description: Putative PGSC0003DMG400023754, Description = Patatin, PFAM = )' T '33.1' 'development.storage proteins' 'nbv0.3scaffold35825_3560-9560' '(at1g33270 : 365.0) Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Patatin (InterPro:IPR002641); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38977 : 139.0) no description available & (reliability: 730.0) & (original description: Putative PGSC0003DMG400023754, Description = Patatin, PFAM = PF01734)' T '33.1' 'development.storage proteins' 'nbv0.3scaffold40799_717-5873' '(at5g04040 : 1083.0) Encodes a triacylglycerol lipase that is involved in storage lipid breakdown during seed germination. The mutant plant exhibits a much slower rate of postgerminative growth than the wild type.; SUGAR-DEPENDENT1 (SDP1); CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Protein of unknown function DUF3336 (InterPro:IPR021771), ARF/SAR superfamily (InterPro:IPR006689), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: sugar-dependent 1-like (TAIR:AT3G57140.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37425 : 641.0) no description available & (gnl|cdd|31938 : 84.4) no description available & (reliability: 2166.0) & (original description: Putative SDP1, Description = Triacylglycerol lipase SDP1, PFAM = PF11815;PF01734)' T '33.1' 'development.storage proteins' 'nbv0.3scaffold65527_1231-6326' '(p13744|11sb_cucma : 406.0) 11S globulin subunit beta precursor [Contains: 11S globulin gamma chain (11S globulin acidic chain); 11S globulin delta chain (11S globulin basic chain)] - Cucurbita maxima (Pumpkin) (Winter squash) & (at5g44120 : 322.0) Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene, CRA2, which is located tandemly with CRA1. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; CRUCIFERINA (CRA1); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell, seed; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: 11-S seed storage protein, conserved site (InterPro:IPR022379), Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), 11-S seed storage protein, plant (InterPro:IPR006044); BEST Arabidopsis thaliana protein match is: cruciferin 2 (TAIR:AT1G03880.1); Has 1047 Blast hits to 1009 proteins in 168 species: Archae - 0; Bacteria - 115; Metazoa - 2; Fungi - 0; Plants - 930; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|84597 : 113.0) no description available & (reliability: 644.0) & (original description: Putative csp1, Description = 11S storage protein, PFAM = PF00190;PF00190)' T '33.1' 'development.storage proteins' 'nbv0.5scaffold290_188496-194776' '(at2g26560 : 491.0) Encodes a lipid acyl hydrolase with wide substrate specificity that accumulates upon infection by fungal and bacterial pathogens. Protein is localized in the cytoplasm in healthy leaves, and in membranes in infected cells. Plays a role in cell death and differentially affects the accumulation of oxylipins. Contributes to resistance to virus.; phospholipase A 2A (PLA2A); FUNCTIONS IN: lipase activity, nutrient reservoir activity; INVOLVED IN: in 6 processes; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein (TAIR:AT4G37070.2); Has 2114 Blast hits to 2104 proteins in 375 species: Archae - 0; Bacteria - 479; Metazoa - 231; Fungi - 198; Plants - 897; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (p07745|pat0_soltu : 320.0) Patatin precursor (Potato tuber protein) - Solanum tuberosum (Potato) & (gnl|cdd|35733 : 258.0) no description available & (gnl|cdd|85637 : 164.0) no description available & (reliability: 982.0) & (original description: Putative PLP2, Description = Patatin-like protein 2, PFAM = PF01734)' T '33.1' 'development.storage proteins' 'nbv0.5scaffold2353_1186-4551' '(p11768|pat3_soltu : 189.0) Patatin class 1 precursor (Patatin class I) (Potato tuber protein) - Solanum tuberosum (Potato) & (at2g26560 : 142.0) Encodes a lipid acyl hydrolase with wide substrate specificity that accumulates upon infection by fungal and bacterial pathogens. Protein is localized in the cytoplasm in healthy leaves, and in membranes in infected cells. Plays a role in cell death and differentially affects the accumulation of oxylipins. Contributes to resistance to virus.; phospholipase A 2A (PLA2A); FUNCTIONS IN: lipase activity, nutrient reservoir activity; INVOLVED IN: in 6 processes; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein (TAIR:AT4G37070.2); Has 2114 Blast hits to 2104 proteins in 375 species: Archae - 0; Bacteria - 479; Metazoa - 231; Fungi - 198; Plants - 897; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative PATB2, Description = Patatin, PFAM = )' T '33.1' 'development.storage proteins' 'nbv0.5scaffold4225_16082-19722' '(p07728|glua1_orysa : 323.0) Glutelin type-A 1 precursor (Glutelin type I) [Contains: Glutelin type-A 1 acidic chain; Glutelin type-A 1 basic chain] - Oryza sativa (Rice) & (at5g44120 : 286.0) Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene, CRA2, which is located tandemly with CRA1. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; CRUCIFERINA (CRA1); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell, seed; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: 11-S seed storage protein, conserved site (InterPro:IPR022379), Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), 11-S seed storage protein, plant (InterPro:IPR006044); BEST Arabidopsis thaliana protein match is: cruciferin 2 (TAIR:AT1G03880.1); Has 1047 Blast hits to 1009 proteins in 168 species: Archae - 0; Bacteria - 115; Metazoa - 2; Fungi - 0; Plants - 930; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|84597 : 100.0) no description available & (reliability: 572.0) & (original description: Putative csp1, Description = Legumin A, PFAM = PF00190;PF00190)' T '33.1' 'development.storage proteins' 'niben044scf00001260ctg003_5088-8956' '(at3g54950 : 302.0) patatin-like protein 6 (PLA IIIA); CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 6 (TAIR:AT2G39220.1); Has 1058 Blast hits to 1055 proteins in 202 species: Archae - 0; Bacteria - 325; Metazoa - 24; Fungi - 32; Plants - 544; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|35733 : 162.0) no description available & (reliability: 604.0) & (original description: Putative PLP7, Description = Patatin-like protein 7, PFAM = PF01734)' T '33.1' 'development.storage proteins' 'niben044scf00002690ctg000_4239-7879' '(p07728|glua1_orysa : 337.0) Glutelin type-A 1 precursor (Glutelin type I) [Contains: Glutelin type-A 1 acidic chain; Glutelin type-A 1 basic chain] - Oryza sativa (Rice) & (at5g44120 : 291.0) Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene, CRA2, which is located tandemly with CRA1. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; CRUCIFERINA (CRA1); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell, seed; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: 11-S seed storage protein, conserved site (InterPro:IPR022379), Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), 11-S seed storage protein, plant (InterPro:IPR006044); BEST Arabidopsis thaliana protein match is: cruciferin 2 (TAIR:AT1G03880.1); Has 1047 Blast hits to 1009 proteins in 168 species: Archae - 0; Bacteria - 115; Metazoa - 2; Fungi - 0; Plants - 930; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|84597 : 101.0) no description available & (reliability: 582.0) & (original description: Putative csp1, Description = Legumin A, PFAM = PF00190;PF00190)' T '33.1' 'development.storage proteins' 'niben044scf00007759ctg003_1-4199' '(at2g26560 : 395.0) Encodes a lipid acyl hydrolase with wide substrate specificity that accumulates upon infection by fungal and bacterial pathogens. Protein is localized in the cytoplasm in healthy leaves, and in membranes in infected cells. Plays a role in cell death and differentially affects the accumulation of oxylipins. Contributes to resistance to virus.; phospholipase A 2A (PLA2A); FUNCTIONS IN: lipase activity, nutrient reservoir activity; INVOLVED IN: in 6 processes; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein (TAIR:AT4G37070.2); Has 2114 Blast hits to 2104 proteins in 375 species: Archae - 0; Bacteria - 479; Metazoa - 231; Fungi - 198; Plants - 897; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (p07745|pat0_soltu : 287.0) Patatin precursor (Potato tuber protein) - Solanum tuberosum (Potato) & (gnl|cdd|35733 : 223.0) no description available & (gnl|cdd|85637 : 149.0) no description available & (reliability: 790.0) & (original description: Putative PLP2, Description = Patatin-like protein 2, PFAM = PF01734)' T '33.1' 'development.storage proteins' 'niben044scf00023410ctg007_33140-37373' '(p13744|11sb_cucma : 399.0) 11S globulin subunit beta precursor [Contains: 11S globulin gamma chain (11S globulin acidic chain); 11S globulin delta chain (11S globulin basic chain)] - Cucurbita maxima (Pumpkin) (Winter squash) & (at5g44120 : 322.0) Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene, CRA2, which is located tandemly with CRA1. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; CRUCIFERINA (CRA1); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell, seed; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: 11-S seed storage protein, conserved site (InterPro:IPR022379), Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), 11-S seed storage protein, plant (InterPro:IPR006044); BEST Arabidopsis thaliana protein match is: cruciferin 2 (TAIR:AT1G03880.1); Has 1047 Blast hits to 1009 proteins in 168 species: Archae - 0; Bacteria - 115; Metazoa - 2; Fungi - 0; Plants - 930; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|84597 : 113.0) no description available & (reliability: 644.0) & (original description: Putative csp1, Description = 11S storage protein, PFAM = PF00190;PF00190)' T '33.1' 'development.storage proteins' 'niben044scf00027536ctg000_15479-18549' '(at2g26560 : 144.0) Encodes a lipid acyl hydrolase with wide substrate specificity that accumulates upon infection by fungal and bacterial pathogens. Protein is localized in the cytoplasm in healthy leaves, and in membranes in infected cells. Plays a role in cell death and differentially affects the accumulation of oxylipins. Contributes to resistance to virus.; phospholipase A 2A (PLA2A); FUNCTIONS IN: lipase activity, nutrient reservoir activity; INVOLVED IN: in 6 processes; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein (TAIR:AT4G37070.2); Has 2114 Blast hits to 2104 proteins in 375 species: Archae - 0; Bacteria - 479; Metazoa - 231; Fungi - 198; Plants - 897; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (p15477|pat2_soltu : 84.0) Patatin B2 precursor (Potato tuber protein) - Solanum tuberosum (Potato) & (reliability: 288.0) & (original description: Putative PAT1, Description = Patatin, PFAM = PF01734)' T '33.1' 'development.storage proteins' 'niben044scf00027753ctg012_7607-13412' '(p09799|vcla_goshi : 300.0) Vicilin GC72-A precursor (Alpha-globulin A) - Gossypium hirsutum (Upland cotton) & (at3g22640 : 247.0) PAP85; FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: stem, seed; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT4G36700.1); Has 886 Blast hits to 876 proteins in 129 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 0; Plants - 826; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|84597 : 99.6) no description available & (reliability: 494.0) & (original description: Putative vic, Description = Vicilin, PFAM = PF04702;PF04702;PF00190;PF00190)' T '33.1' 'development.storage proteins' 'niben044scf00036553ctg008_676-4134' '(p11768|pat3_soltu : 231.0) Patatin class 1 precursor (Patatin class I) (Potato tuber protein) - Solanum tuberosum (Potato) & (at4g37050 : 178.0) Patatin-related phospholipase A. Expressed in the floral gynaecium and is induced by abscisic acid (ABA) or phosphate deficiency in roots.; PATATIN-like protein 4 (PLP4); CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein (TAIR:AT4G37070.2); Has 2044 Blast hits to 2033 proteins in 371 species: Archae - 0; Bacteria - 489; Metazoa - 210; Fungi - 168; Plants - 876; Viruses - 0; Other Eukaryotes - 301 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative PAT1, Description = Patatin, PFAM = )' T '33.1' 'development.storage proteins' 'niben044scf00042951ctg004_740-5441' '(p13744|11sb_cucma : 374.0) 11S globulin subunit beta precursor [Contains: 11S globulin gamma chain (11S globulin acidic chain); 11S globulin delta chain (11S globulin basic chain)] - Cucurbita maxima (Pumpkin) (Winter squash) & (at5g44120 : 311.0) Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene, CRA2, which is located tandemly with CRA1. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; CRUCIFERINA (CRA1); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell, seed; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: 11-S seed storage protein, conserved site (InterPro:IPR022379), Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), 11-S seed storage protein, plant (InterPro:IPR006044); BEST Arabidopsis thaliana protein match is: cruciferin 2 (TAIR:AT1G03880.1); Has 1047 Blast hits to 1009 proteins in 168 species: Archae - 0; Bacteria - 115; Metazoa - 2; Fungi - 0; Plants - 930; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|84597 : 114.0) no description available & (reliability: 622.0) & (original description: Putative csp1, Description = 11S storage protein, PFAM = PF00190;PF00190)' T '33.1' 'development.storage proteins' 'niben044scf00048970ctg000_13697-18853' '(at5g04040 : 512.0) Encodes a triacylglycerol lipase that is involved in storage lipid breakdown during seed germination. The mutant plant exhibits a much slower rate of postgerminative growth than the wild type.; SUGAR-DEPENDENT1 (SDP1); CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Protein of unknown function DUF3336 (InterPro:IPR021771), ARF/SAR superfamily (InterPro:IPR006689), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: sugar-dependent 1-like (TAIR:AT3G57140.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37425 : 495.0) no description available & (reliability: 1024.0) & (original description: Putative Sb01g003870, Description = Putative uncharacterized protein Sb01g003870, PFAM = PF11815;PF01734)' T '33.1' 'development.storage proteins' 'niben101ctg15499_1-4284' '(at2g28490 : 419.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: seed; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT2G18540.1); Has 66502 Blast hits to 16031 proteins in 1327 species: Archae - 49; Bacteria - 29374; Metazoa - 18792; Fungi - 2857; Plants - 8517; Viruses - 833; Other Eukaryotes - 6080 (source: NCBI BLink). & (gnl|cdd|84597 : 98.5) no description available & (p15590|glb1_maize : 97.4) Globulin-1 S allele precursor (GLB1-S) (7S-like) - Zea mays (Maize) & (reliability: 838.0) & (original description: Putative At2g28490, Description = Vicilin-like seed storage protein At2g28490, PFAM = PF00190)' T '33.1' 'development.storage proteins' 'niben101ctg15717_1-3413' '(at3g54950 : 326.0) patatin-like protein 6 (PLA IIIA); CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 6 (TAIR:AT2G39220.1); Has 1058 Blast hits to 1055 proteins in 202 species: Archae - 0; Bacteria - 325; Metazoa - 24; Fungi - 32; Plants - 544; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|35733 : 170.0) no description available & (gnl|cdd|85637 : 84.6) no description available & (reliability: 652.0) & (original description: Putative PLP9, Description = Probable inactive patatin-like protein 9, PFAM = PF01734)' T '33.1' 'development.storage proteins' 'niben101scf00501_182068-186769' '(p13744|11sb_cucma : 350.0) 11S globulin subunit beta precursor [Contains: 11S globulin gamma chain (11S globulin acidic chain); 11S globulin delta chain (11S globulin basic chain)] - Cucurbita maxima (Pumpkin) (Winter squash) & (at5g44120 : 291.0) Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene, CRA2, which is located tandemly with CRA1. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; CRUCIFERINA (CRA1); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell, seed; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: 11-S seed storage protein, conserved site (InterPro:IPR022379), Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), 11-S seed storage protein, plant (InterPro:IPR006044); BEST Arabidopsis thaliana protein match is: cruciferin 2 (TAIR:AT1G03880.1); Has 1047 Blast hits to 1009 proteins in 168 species: Archae - 0; Bacteria - 115; Metazoa - 2; Fungi - 0; Plants - 930; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|84597 : 113.0) no description available & (reliability: 582.0) & (original description: Putative csp1, Description = 11S storage protein, PFAM = PF00190;PF00190)' T '33.1' 'development.storage proteins' 'niben101scf00711_191222-196378' '(at5g04040 : 972.0) Encodes a triacylglycerol lipase that is involved in storage lipid breakdown during seed germination. The mutant plant exhibits a much slower rate of postgerminative growth than the wild type.; SUGAR-DEPENDENT1 (SDP1); CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Protein of unknown function DUF3336 (InterPro:IPR021771), ARF/SAR superfamily (InterPro:IPR006689), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: sugar-dependent 1-like (TAIR:AT3G57140.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37425 : 546.0) no description available & (reliability: 1944.0) & (original description: Putative SDP1, Description = Triacylglycerol lipase SDP1, PFAM = PF11815;PF01734)' T '33.1' 'development.storage proteins' 'niben101scf01013_192234-197211' '(p09800|legb_goshi : 396.0) Legumin B precursor (Beta-globulin B) (LEGB-C134) [Contains: Legumin B acidic chain; Legumin B basic chain] - Gossypium hirsutum (Upland cotton) & (at5g44120 : 317.0) Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene, CRA2, which is located tandemly with CRA1. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; CRUCIFERINA (CRA1); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell, seed; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: 11-S seed storage protein, conserved site (InterPro:IPR022379), Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), 11-S seed storage protein, plant (InterPro:IPR006044); BEST Arabidopsis thaliana protein match is: cruciferin 2 (TAIR:AT1G03880.1); Has 1047 Blast hits to 1009 proteins in 168 species: Archae - 0; Bacteria - 115; Metazoa - 2; Fungi - 0; Plants - 930; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|84597 : 111.0) no description available & (reliability: 634.0) & (original description: Putative csp1, Description = 11S globulin, PFAM = PF00190;PF00190)' T '33.1' 'development.storage proteins' 'niben101scf01090_318199-322002' '(p13744|11sb_cucma : 363.0) 11S globulin subunit beta precursor [Contains: 11S globulin gamma chain (11S globulin acidic chain); 11S globulin delta chain (11S globulin basic chain)] - Cucurbita maxima (Pumpkin) (Winter squash) & (at5g44120 : 360.0) Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene, CRA2, which is located tandemly with CRA1. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; CRUCIFERINA (CRA1); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell, seed; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: 11-S seed storage protein, conserved site (InterPro:IPR022379), Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), 11-S seed storage protein, plant (InterPro:IPR006044); BEST Arabidopsis thaliana protein match is: cruciferin 2 (TAIR:AT1G03880.1); Has 1047 Blast hits to 1009 proteins in 168 species: Archae - 0; Bacteria - 115; Metazoa - 2; Fungi - 0; Plants - 930; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|84597 : 110.0) no description available & (reliability: 720.0) & (original description: Putative csp1, Description = Glutelin, PFAM = PF00190;PF00190)' T '33.1' 'development.storage proteins' 'niben101scf01090_384319-388042' '(p14614|glub4_orysa : 340.0) Glutelin type-B 4 precursor [Contains: Glutelin type-B 4 acidic chain; Glutelin type-B 4 basic chain] - Oryza sativa (Rice) & (at5g44120 : 327.0) Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene, CRA2, which is located tandemly with CRA1. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; CRUCIFERINA (CRA1); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell, seed; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: 11-S seed storage protein, conserved site (InterPro:IPR022379), Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), 11-S seed storage protein, plant (InterPro:IPR006044); BEST Arabidopsis thaliana protein match is: cruciferin 2 (TAIR:AT1G03880.1); Has 1047 Blast hits to 1009 proteins in 168 species: Archae - 0; Bacteria - 115; Metazoa - 2; Fungi - 0; Plants - 930; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|84597 : 108.0) no description available & (reliability: 654.0) & (original description: Putative GLUB4, Description = Glutelin type-B 4, PFAM = PF00190;PF00190)' T '33.1' 'development.storage proteins' 'niben101scf01469_172227-176797' '(at2g26560 : 419.0) Encodes a lipid acyl hydrolase with wide substrate specificity that accumulates upon infection by fungal and bacterial pathogens. Protein is localized in the cytoplasm in healthy leaves, and in membranes in infected cells. Plays a role in cell death and differentially affects the accumulation of oxylipins. Contributes to resistance to virus.; phospholipase A 2A (PLA2A); FUNCTIONS IN: lipase activity, nutrient reservoir activity; INVOLVED IN: in 6 processes; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein (TAIR:AT4G37070.2); Has 2114 Blast hits to 2104 proteins in 375 species: Archae - 0; Bacteria - 479; Metazoa - 231; Fungi - 198; Plants - 897; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (p15478|pat5_soltu : 275.0) Patatin T5 precursor (Potato tuber protein) - Solanum tuberosum (Potato) & (gnl|cdd|35733 : 207.0) no description available & (gnl|cdd|85637 : 150.0) no description available & (reliability: 838.0) & (original description: Putative PLP, Description = Patatin, PFAM = PF01734)' T '33.1' 'development.storage proteins' 'niben101scf01469_205993-210209' '(at2g26560 : 429.0) Encodes a lipid acyl hydrolase with wide substrate specificity that accumulates upon infection by fungal and bacterial pathogens. Protein is localized in the cytoplasm in healthy leaves, and in membranes in infected cells. Plays a role in cell death and differentially affects the accumulation of oxylipins. Contributes to resistance to virus.; phospholipase A 2A (PLA2A); FUNCTIONS IN: lipase activity, nutrient reservoir activity; INVOLVED IN: in 6 processes; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein (TAIR:AT4G37070.2); Has 2114 Blast hits to 2104 proteins in 375 species: Archae - 0; Bacteria - 479; Metazoa - 231; Fungi - 198; Plants - 897; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (p11768|pat3_soltu : 276.0) Patatin class 1 precursor (Patatin class I) (Potato tuber protein) - Solanum tuberosum (Potato) & (gnl|cdd|35733 : 268.0) no description available & (gnl|cdd|85637 : 153.0) no description available & (reliability: 858.0) & (original description: Putative PLP2, Description = Patatin-like protein 2, PFAM = PF01734)' T '33.1' 'development.storage proteins' 'niben101scf01866_224507-228551' '(at1g07750 : 572.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: copper ion binding, zinc ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), 11-S seed storage protein, plant (InterPro:IPR006044); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT2G28680.1); Has 920 Blast hits to 832 proteins in 102 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 0; Plants - 914; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p07728|glua1_orysa : 129.0) Glutelin type-A 1 precursor (Glutelin type I) [Contains: Glutelin type-A 1 acidic chain; Glutelin type-A 1 basic chain] - Oryza sativa (Rice) & (reliability: 1144.0) & (original description: Putative Pss, Description = 11S seed storage protein, PFAM = PF00190;PF00190)' T '33.1' 'development.storage proteins' 'niben101scf02021_518213-521710' '(at3g63200 : 526.0) PATATIN-like protein 9 (PLP9); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: metabolic process, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 6 (TAIR:AT2G39220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35733 : 192.0) no description available & (gnl|cdd|85637 : 105.0) no description available & (p15478|pat5_soltu : 83.2) Patatin T5 precursor (Potato tuber protein) - Solanum tuberosum (Potato) & (reliability: 1052.0) & (original description: Putative PLP9, Description = Probable inactive patatin-like protein 9, PFAM = PF01734)' T '33.1' 'development.storage proteins' 'niben101scf02195_664673-672056' '(at4g37050 : 396.0) Patatin-related phospholipase A. Expressed in the floral gynaecium and is induced by abscisic acid (ABA) or phosphate deficiency in roots.; PATATIN-like protein 4 (PLP4); CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein (TAIR:AT4G37070.2); Has 2044 Blast hits to 2033 proteins in 371 species: Archae - 0; Bacteria - 489; Metazoa - 210; Fungi - 168; Plants - 876; Viruses - 0; Other Eukaryotes - 301 (source: NCBI BLink). & (p11768|pat3_soltu : 266.0) Patatin class 1 precursor (Patatin class I) (Potato tuber protein) - Solanum tuberosum (Potato) & (gnl|cdd|35733 : 212.0) no description available & (gnl|cdd|85637 : 145.0) no description available & (reliability: 792.0) & (original description: Putative PAT3, Description = Patatin, PFAM = PF01734)' T '33.1' 'development.storage proteins' 'niben101scf02475_217338-223120' '(at5g04040 : 1168.0) Encodes a triacylglycerol lipase that is involved in storage lipid breakdown during seed germination. The mutant plant exhibits a much slower rate of postgerminative growth than the wild type.; SUGAR-DEPENDENT1 (SDP1); CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Protein of unknown function DUF3336 (InterPro:IPR021771), ARF/SAR superfamily (InterPro:IPR006689), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: sugar-dependent 1-like (TAIR:AT3G57140.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37425 : 678.0) no description available & (gnl|cdd|31938 : 88.2) no description available & (reliability: 2336.0) & (original description: Putative SDP1, Description = Triacylglycerol lipase SDP1, PFAM = PF11815;PF01734)' T '33.1' 'development.storage proteins' 'niben101scf02829_981831-986268' '(q04672|sbp_soybn : 338.0) Sucrose-binding protein precursor (SBP) - Glycine max (Soybean) & (at3g22640 : 228.0) PAP85; FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: stem, seed; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT4G36700.1); Has 886 Blast hits to 876 proteins in 129 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 0; Plants - 826; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|84597 : 89.6) no description available & (reliability: 456.0) & (original description: Putative p54, Description = P54 protein, PFAM = PF00190)' T '33.1' 'development.storage proteins' 'niben101scf02849_522405-525850' '(at4g37050 : 349.0) Patatin-related phospholipase A. Expressed in the floral gynaecium and is induced by abscisic acid (ABA) or phosphate deficiency in roots.; PATATIN-like protein 4 (PLP4); CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein (TAIR:AT4G37070.2); Has 2044 Blast hits to 2033 proteins in 371 species: Archae - 0; Bacteria - 489; Metazoa - 210; Fungi - 168; Plants - 876; Viruses - 0; Other Eukaryotes - 301 (source: NCBI BLink). & (p11768|pat3_soltu : 213.0) Patatin class 1 precursor (Patatin class I) (Potato tuber protein) - Solanum tuberosum (Potato) & (gnl|cdd|35733 : 170.0) no description available & (gnl|cdd|85637 : 90.7) no description available & (reliability: 698.0) & (original description: Putative PGSC0003DMG400015769, Description = Patatin, PFAM = PF01734)' T '33.1' 'development.storage proteins' 'niben101scf02849_679837-686600' '(at2g26560 : 375.0) Encodes a lipid acyl hydrolase with wide substrate specificity that accumulates upon infection by fungal and bacterial pathogens. Protein is localized in the cytoplasm in healthy leaves, and in membranes in infected cells. Plays a role in cell death and differentially affects the accumulation of oxylipins. Contributes to resistance to virus.; phospholipase A 2A (PLA2A); FUNCTIONS IN: lipase activity, nutrient reservoir activity; INVOLVED IN: in 6 processes; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein (TAIR:AT4G37070.2); Has 2114 Blast hits to 2104 proteins in 375 species: Archae - 0; Bacteria - 479; Metazoa - 231; Fungi - 198; Plants - 897; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (p11768|pat3_soltu : 280.0) Patatin class 1 precursor (Patatin class I) (Potato tuber protein) - Solanum tuberosum (Potato) & (gnl|cdd|35733 : 224.0) no description available & (gnl|cdd|85637 : 154.0) no description available & (reliability: 750.0) & (original description: Putative PAT3, Description = Patatin, PFAM = PF01734)' T '33.1' 'development.storage proteins' 'niben101scf02849_715636-723808' '(at4g37050 : 396.0) Patatin-related phospholipase A. Expressed in the floral gynaecium and is induced by abscisic acid (ABA) or phosphate deficiency in roots.; PATATIN-like protein 4 (PLP4); CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein (TAIR:AT4G37070.2); Has 2044 Blast hits to 2033 proteins in 371 species: Archae - 0; Bacteria - 489; Metazoa - 210; Fungi - 168; Plants - 876; Viruses - 0; Other Eukaryotes - 301 (source: NCBI BLink). & (p15478|pat5_soltu : 289.0) Patatin T5 precursor (Potato tuber protein) - Solanum tuberosum (Potato) & (gnl|cdd|35733 : 226.0) no description available & (gnl|cdd|85637 : 153.0) no description available & (reliability: 792.0) & (original description: Putative PLP1, Description = Patatin-like protein 1, PFAM = PF01734)' T '33.1' 'development.storage proteins' 'niben101scf03450_61463-68386' '(p13744|11sb_cucma : 411.0) 11S globulin subunit beta precursor [Contains: 11S globulin gamma chain (11S globulin acidic chain); 11S globulin delta chain (11S globulin basic chain)] - Cucurbita maxima (Pumpkin) (Winter squash) & (at5g44120 : 339.0) Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene, CRA2, which is located tandemly with CRA1. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; CRUCIFERINA (CRA1); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell, seed; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: 11-S seed storage protein, conserved site (InterPro:IPR022379), Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), 11-S seed storage protein, plant (InterPro:IPR006044); BEST Arabidopsis thaliana protein match is: cruciferin 2 (TAIR:AT1G03880.1); Has 1047 Blast hits to 1009 proteins in 168 species: Archae - 0; Bacteria - 115; Metazoa - 2; Fungi - 0; Plants - 930; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|84597 : 113.0) no description available & (reliability: 678.0) & (original description: Putative csp1, Description = 11S storage protein, PFAM = PF00190;PF00190)' T '33.1' 'development.storage proteins' 'niben101scf04283_1090052-1093498' '(at3g63200 : 535.0) PATATIN-like protein 9 (PLP9); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: metabolic process, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 6 (TAIR:AT2G39220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35733 : 194.0) no description available & (gnl|cdd|33420 : 100.0) no description available & (p07745|pat0_soltu : 81.6) Patatin precursor (Potato tuber protein) - Solanum tuberosum (Potato) & (reliability: 1070.0) & (original description: Putative PGSC0003DMG400012878, Description = Patatin, PFAM = PF01734)' T '33.1' 'development.storage proteins' 'niben101scf04907_267749-272871' '(at2g39220 : 617.0) PATATIN-like protein 6 (PLP6); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: metabolic process, lipid metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: patatin-like protein 6 (TAIR:AT3G54950.1); Has 1294 Blast hits to 1292 proteins in 232 species: Archae - 0; Bacteria - 327; Metazoa - 139; Fungi - 43; Plants - 635; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|35733 : 290.0) no description available & (gnl|cdd|85637 : 120.0) no description available & (p15478|pat5_soltu : 107.0) Patatin T5 precursor (Potato tuber protein) - Solanum tuberosum (Potato) & (reliability: 1234.0) & (original description: Putative PLP7, Description = Patatin-like protein 7, PFAM = PF01734)' T '33.1' 'development.storage proteins' 'niben101scf04932_166453-170203' '(p14614|glub4_orysa : 340.0) Glutelin type-B 4 precursor [Contains: Glutelin type-B 4 acidic chain; Glutelin type-B 4 basic chain] - Oryza sativa (Rice) & (at5g44120 : 326.0) Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene, CRA2, which is located tandemly with CRA1. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; CRUCIFERINA (CRA1); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell, seed; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: 11-S seed storage protein, conserved site (InterPro:IPR022379), Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), 11-S seed storage protein, plant (InterPro:IPR006044); BEST Arabidopsis thaliana protein match is: cruciferin 2 (TAIR:AT1G03880.1); Has 1047 Blast hits to 1009 proteins in 168 species: Archae - 0; Bacteria - 115; Metazoa - 2; Fungi - 0; Plants - 930; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|84597 : 108.0) no description available & (reliability: 652.0) & (original description: Putative CRA1, Description = 12S seed storage protein CRA1, PFAM = PF00190;PF00190)' T '33.1' 'development.storage proteins' 'niben101scf05364_43099-48141' '(at2g39220 : 608.0) PATATIN-like protein 6 (PLP6); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: metabolic process, lipid metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: patatin-like protein 6 (TAIR:AT3G54950.1); Has 1294 Blast hits to 1292 proteins in 232 species: Archae - 0; Bacteria - 327; Metazoa - 139; Fungi - 43; Plants - 635; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|35733 : 288.0) no description available & (p15478|pat5_soltu : 120.0) Patatin T5 precursor (Potato tuber protein) - Solanum tuberosum (Potato) & (gnl|cdd|85637 : 120.0) no description available & (reliability: 1216.0) & (original description: Putative PGSC0003DMG400023463, Description = Patatin, PFAM = PF01734)' T '33.1' 'development.storage proteins' 'niben101scf05372_537945-542049' '(at2g28490 : 410.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: seed; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT2G18540.1); Has 66502 Blast hits to 16031 proteins in 1327 species: Archae - 49; Bacteria - 29374; Metazoa - 18792; Fungi - 2857; Plants - 8517; Viruses - 833; Other Eukaryotes - 6080 (source: NCBI BLink). & (gnl|cdd|84597 : 101.0) no description available & (p25974|glcb_soybn : 96.7) Beta-conglycinin, beta chain precursor - Glycine max (Soybean) & (reliability: 820.0) & (original description: Putative At2g28490, Description = Vicilin-like seed storage protein At2g28490, PFAM = PF00190;PF00190)' T '33.1' 'development.storage proteins' 'niben101scf05559_164443-167858' '(at3g63200 : 449.0) PATATIN-like protein 9 (PLP9); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: metabolic process, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 6 (TAIR:AT2G39220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35733 : 199.0) no description available & (gnl|cdd|85637 : 104.0) no description available & (reliability: 898.0) & (original description: Putative PLP9, Description = Probable inactive patatin-like protein 9, PFAM = PF01734)' T '33.1' 'development.storage proteins' 'niben101scf05732_115406-121755' '(at1g33270 : 466.0) Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Patatin (InterPro:IPR002641); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38977 : 179.0) no description available & (reliability: 932.0) & (original description: Putative PGSC0003DMG400023754, Description = Patatin, PFAM = PF01734)' T '33.1' 'development.storage proteins' 'niben101scf05732_115475-121475' '(at1g33270 : 364.0) Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Patatin (InterPro:IPR002641); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38977 : 140.0) no description available & (reliability: 728.0) & (original description: Putative PGSC0003DMG400023754, Description = Patatin, PFAM = PF01734)' T '33.1' 'development.storage proteins' 'niben101scf05813_215962-219904' '(at2g26560 : 340.0) Encodes a lipid acyl hydrolase with wide substrate specificity that accumulates upon infection by fungal and bacterial pathogens. Protein is localized in the cytoplasm in healthy leaves, and in membranes in infected cells. Plays a role in cell death and differentially affects the accumulation of oxylipins. Contributes to resistance to virus.; phospholipase A 2A (PLA2A); FUNCTIONS IN: lipase activity, nutrient reservoir activity; INVOLVED IN: in 6 processes; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein (TAIR:AT4G37070.2); Has 2114 Blast hits to 2104 proteins in 375 species: Archae - 0; Bacteria - 479; Metazoa - 231; Fungi - 198; Plants - 897; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (p07745|pat0_soltu : 210.0) Patatin precursor (Potato tuber protein) - Solanum tuberosum (Potato) & (gnl|cdd|35733 : 166.0) no description available & (gnl|cdd|85637 : 136.0) no description available & (reliability: 680.0) & (original description: Putative PAT1, Description = Patatin, PFAM = PF01734)' T '33.1' 'development.storage proteins' 'niben101scf05813_888155-893899' '(at2g26560 : 370.0) Encodes a lipid acyl hydrolase with wide substrate specificity that accumulates upon infection by fungal and bacterial pathogens. Protein is localized in the cytoplasm in healthy leaves, and in membranes in infected cells. Plays a role in cell death and differentially affects the accumulation of oxylipins. Contributes to resistance to virus.; phospholipase A 2A (PLA2A); FUNCTIONS IN: lipase activity, nutrient reservoir activity; INVOLVED IN: in 6 processes; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein (TAIR:AT4G37070.2); Has 2114 Blast hits to 2104 proteins in 375 species: Archae - 0; Bacteria - 479; Metazoa - 231; Fungi - 198; Plants - 897; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (p07745|pat0_soltu : 257.0) Patatin precursor (Potato tuber protein) - Solanum tuberosum (Potato) & (gnl|cdd|35733 : 224.0) no description available & (gnl|cdd|85637 : 148.0) no description available & (reliability: 740.0) & (original description: Putative PLA2, Description = Patatin, PFAM = PF01734)' T '33.1' 'development.storage proteins' 'niben101scf06277_459-5162' '(at2g26560 : 430.0) Encodes a lipid acyl hydrolase with wide substrate specificity that accumulates upon infection by fungal and bacterial pathogens. Protein is localized in the cytoplasm in healthy leaves, and in membranes in infected cells. Plays a role in cell death and differentially affects the accumulation of oxylipins. Contributes to resistance to virus.; phospholipase A 2A (PLA2A); FUNCTIONS IN: lipase activity, nutrient reservoir activity; INVOLVED IN: in 6 processes; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein (TAIR:AT4G37070.2); Has 2114 Blast hits to 2104 proteins in 375 species: Archae - 0; Bacteria - 479; Metazoa - 231; Fungi - 198; Plants - 897; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (p15478|pat5_soltu : 288.0) Patatin T5 precursor (Potato tuber protein) - Solanum tuberosum (Potato) & (gnl|cdd|35733 : 232.0) no description available & (gnl|cdd|85637 : 152.0) no description available & (reliability: 860.0) & (original description: Putative PLP2, Description = Patatin-like protein 2, PFAM = PF01734)' T '33.1' 'development.storage proteins' 'niben101scf06819_604920-608335' '(at3g63200 : 438.0) PATATIN-like protein 9 (PLP9); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: metabolic process, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 6 (TAIR:AT2G39220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35733 : 194.0) no description available & (gnl|cdd|85637 : 106.0) no description available & (reliability: 876.0) & (original description: Putative PLP6, Description = Patatin, PFAM = PF01734)' T '33.1' 'development.storage proteins' 'niben101scf07048_154747-158392' '(at3g54950 : 334.0) patatin-like protein 6 (PLA IIIA); CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 6 (TAIR:AT2G39220.1); Has 1058 Blast hits to 1055 proteins in 202 species: Archae - 0; Bacteria - 325; Metazoa - 24; Fungi - 32; Plants - 544; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|35733 : 165.0) no description available & (reliability: 668.0) & (original description: Putative PLP3, Description = Patatin-like protein 3, PFAM = )' T '33.1' 'development.storage proteins' 'niben101scf07687_240367-243233' '(at1g04040 : 297.0) HAD superfamily, subfamily IIIB acid phosphatase ; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519), Vegetative storage protein/acid phosphatase (InterPro:IPR014403), Acid phosphatase, plant (InterPro:IPR010028); BEST Arabidopsis thaliana protein match is: HAD superfamily, subfamily IIIB acid phosphatase (TAIR:AT5G44020.1); Has 1079 Blast hits to 1077 proteins in 335 species: Archae - 0; Bacteria - 592; Metazoa - 2; Fungi - 0; Plants - 364; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink). & (gnl|cdd|67385 : 247.0) no description available & (p15490|vspa_soybn : 174.0) Stem 28 kDa glycoprotein precursor (Vegetative storage protein A) - Glycine max (Soybean) & (reliability: 560.0) & (original description: Putative BnaC08g43690D, Description = BnaC08g43690D protein, PFAM = PF03767)' T '33.1' 'development.storage proteins' 'niben101scf09547_215508-221541' '(p09799|vcla_goshi : 321.0) Vicilin GC72-A precursor (Alpha-globulin A) - Gossypium hirsutum (Upland cotton) & (at3g22640 : 256.0) PAP85; FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: stem, seed; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT4G36700.1); Has 886 Blast hits to 876 proteins in 129 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 0; Plants - 826; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|84597 : 95.4) no description available & (reliability: 512.0) & (original description: Putative vic, Description = Vicilin, PFAM = PF04702;PF00190;PF00190)' T '33.1' 'development.storage proteins' 'niben101scf09792_485808-491443' '(q6eru3|glub5_orysa : 375.0) Glutelin type-B 5 precursor [Contains: Glutelin type-B 5 acidic chain; Glutelin type-B 5 basic chain] - Oryza sativa (Rice) & (at5g44120 : 362.0) Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene, CRA2, which is located tandemly with CRA1. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; CRUCIFERINA (CRA1); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell, seed; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: 11-S seed storage protein, conserved site (InterPro:IPR022379), Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), 11-S seed storage protein, plant (InterPro:IPR006044); BEST Arabidopsis thaliana protein match is: cruciferin 2 (TAIR:AT1G03880.1); Has 1047 Blast hits to 1009 proteins in 168 species: Archae - 0; Bacteria - 115; Metazoa - 2; Fungi - 0; Plants - 930; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|84597 : 106.0) no description available & (reliability: 724.0) & (original description: Putative GLUB4, Description = Glutelin type-B 4, PFAM = PF00190;PF00190)' T '33.1' 'development.storage proteins' 'niben101scf11609_272395-277046' '(p09799|vcla_goshi : 303.0) Vicilin GC72-A precursor (Alpha-globulin A) - Gossypium hirsutum (Upland cotton) & (at3g22640 : 239.0) PAP85; FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: stem, seed; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT4G36700.1); Has 886 Blast hits to 876 proteins in 129 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 0; Plants - 826; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (reliability: 478.0) & (original description: Putative vic, Description = Vicilin, PFAM = PF00190;PF00190)' T '33.1' 'development.storage proteins' 'niben101scf13017_79434-84529' '(p13744|11sb_cucma : 388.0) 11S globulin subunit beta precursor [Contains: 11S globulin gamma chain (11S globulin acidic chain); 11S globulin delta chain (11S globulin basic chain)] - Cucurbita maxima (Pumpkin) (Winter squash) & (at5g44120 : 303.0) Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene, CRA2, which is located tandemly with CRA1. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; CRUCIFERINA (CRA1); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell, seed; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: 11-S seed storage protein, conserved site (InterPro:IPR022379), Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), 11-S seed storage protein, plant (InterPro:IPR006044); BEST Arabidopsis thaliana protein match is: cruciferin 2 (TAIR:AT1G03880.1); Has 1047 Blast hits to 1009 proteins in 168 species: Archae - 0; Bacteria - 115; Metazoa - 2; Fungi - 0; Plants - 930; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|84597 : 113.0) no description available & (reliability: 606.0) & (original description: Putative csp1, Description = 11S storage protein, PFAM = PF00190;PF00190)' T '33.1' 'development.storage proteins' 'niben101scf15467_208594-216412' '(at2g26560 : 452.0) Encodes a lipid acyl hydrolase with wide substrate specificity that accumulates upon infection by fungal and bacterial pathogens. Protein is localized in the cytoplasm in healthy leaves, and in membranes in infected cells. Plays a role in cell death and differentially affects the accumulation of oxylipins. Contributes to resistance to virus.; phospholipase A 2A (PLA2A); FUNCTIONS IN: lipase activity, nutrient reservoir activity; INVOLVED IN: in 6 processes; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein (TAIR:AT4G37070.2); Has 2114 Blast hits to 2104 proteins in 375 species: Archae - 0; Bacteria - 479; Metazoa - 231; Fungi - 198; Plants - 897; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (p07745|pat0_soltu : 287.0) Patatin precursor (Potato tuber protein) - Solanum tuberosum (Potato) & (gnl|cdd|35733 : 243.0) no description available & (gnl|cdd|85637 : 163.0) no description available & (reliability: 904.0) & (original description: Putative PAT1, Description = Patatin, PFAM = PF01734)' T '33.1' 'development.storage proteins' 'niben101scf15467_264658-279763' '(at2g26560 : 524.0) Encodes a lipid acyl hydrolase with wide substrate specificity that accumulates upon infection by fungal and bacterial pathogens. Protein is localized in the cytoplasm in healthy leaves, and in membranes in infected cells. Plays a role in cell death and differentially affects the accumulation of oxylipins. Contributes to resistance to virus.; phospholipase A 2A (PLA2A); FUNCTIONS IN: lipase activity, nutrient reservoir activity; INVOLVED IN: in 6 processes; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein (TAIR:AT4G37070.2); Has 2114 Blast hits to 2104 proteins in 375 species: Archae - 0; Bacteria - 479; Metazoa - 231; Fungi - 198; Plants - 897; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (p07745|pat0_soltu : 341.0) Patatin precursor (Potato tuber protein) - Solanum tuberosum (Potato) & (gnl|cdd|35733 : 262.0) no description available & (gnl|cdd|85637 : 160.0) no description available & (reliability: 1048.0) & (original description: Putative PLP2, Description = Patatin-like protein 2, PFAM = PF01734)' T '33.2' 'development.late embryogenesis abundant' 'nbv0.3scaffold24403_11964-15670' '(at3g19430 : 352.0) late embryogenesis abundant protein-related / LEA protein-related; CONTAINS InterPro DOMAIN/s: Root cap (InterPro:IPR009646); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) protein-related (TAIR:AT5G60520.1); Has 407828 Blast hits to 124211 proteins in 3571 species: Archae - 1492; Bacteria - 100012; Metazoa - 145570; Fungi - 58500; Plants - 39690; Viruses - 10531; Other Eukaryotes - 52033 (source: NCBI BLink). & (gnl|cdd|70305 : 91.9) no description available & (reliability: 704.0) & (original description: Putative LEA1, Description = Late embryogenic abundant protein, PFAM = PF06830)' T '33.2' 'development.late embryogenesis abundant' 'nbv0.5scaffold1803_189932-200514' '(at3g50790 : 515.0) esterase/lipase/thioesterase family protein; FUNCTIONS IN: hydrolase activity, carboxylesterase activity; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0017, hydrolase-like, conserved site (InterPro:IPR000952), AB-hydrolase YheT, putative (InterPro:IPR012020), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G49950.1); Has 2554 Blast hits to 2547 proteins in 951 species: Archae - 0; Bacteria - 1494; Metazoa - 334; Fungi - 200; Plants - 135; Viruses - 0; Other Eukaryotes - 391 (source: NCBI BLink). & (gnl|cdd|37049 : 364.0) no description available & (gnl|cdd|30778 : 243.0) no description available & (reliability: 1030.0) & (original description: Putative EMB8, Description = Uncharacterized protein family UPF0017, hydrolase-like, conserved site-containing protein, PFAM = PF00561)' T '33.2' 'development.late embryogenesis abundant' 'niben044scf00003488ctg004_1249-5334' '(p20075|lead8_dauca : 107.0) Embryonic protein DC-8 - Daucus carota (Carrot) & (at2g36640 : 97.8) Encodes putative phosphotyrosine protein belonging to late embryogenesis abundant (LEA) protein in group 3 that might be involved in maturation and desiccation tolerance of seeds. RFLP and CAPS mapping place it on chromosome 4 but the nucleotide sequence maps it to chromosome 2.; embryonic cell protein 63 (ECP63); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: fruit, seed; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 4 (InterPro:IPR004238); BEST Arabidopsis thaliana protein match is: late embryogenesis abundant protein, putative / LEA protein, putative (TAIR:AT3G53040.1); Has 29213 Blast hits to 16834 proteins in 2229 species: Archae - 326; Bacteria - 11175; Metazoa - 5508; Fungi - 2029; Plants - 3175; Viruses - 194; Other Eukaryotes - 6806 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative ECP63, Description = LEA protein group 3, PFAM = PF02987;PF02987)' T '33.2' 'development.late embryogenesis abundant' 'niben044scf00006085ctg001_13942-18569' '(at3g19430 : 392.0) late embryogenesis abundant protein-related / LEA protein-related; CONTAINS InterPro DOMAIN/s: Root cap (InterPro:IPR009646); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) protein-related (TAIR:AT5G60520.1); Has 407828 Blast hits to 124211 proteins in 3571 species: Archae - 1492; Bacteria - 100012; Metazoa - 145570; Fungi - 58500; Plants - 39690; Viruses - 10531; Other Eukaryotes - 52033 (source: NCBI BLink). & (gnl|cdd|70305 : 89.9) no description available & (gnl|cdd|35528 : 83.9) no description available & (reliability: 784.0) & (original description: Putative EMB7, Description = Late embryogenesis abundant protein, PFAM = PF06830)' T '33.2' 'development.late embryogenesis abundant' 'niben044scf00006525ctg006_13532-16491' '(at2g44060 : 424.0) Late embryogenesis abundant protein, group 2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion, response to desiccation, embryo development ending in seed dormancy; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Water stress and hypersensitive response domain (InterPro:IPR013990), Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (TAIR:AT1G01470.1); Has 294 Blast hits to 286 proteins in 78 species: Archae - 4; Bacteria - 52; Metazoa - 0; Fungi - 0; Plants - 235; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|66818 : 173.0) no description available & (p46518|lea14_goshi : 88.2) Late embryogenesis abundant protein Lea14-A - Gossypium hirsutum (Upland cotton) & (reliability: 848.0) & (original description: Putative WHY2, Description = WHY domain class transcription factor, PFAM = PF03168;PF03168)' T '33.2' 'development.late embryogenesis abundant' 'niben044scf00020588ctg016_1968-6132' '(at3g19430 : 391.0) late embryogenesis abundant protein-related / LEA protein-related; CONTAINS InterPro DOMAIN/s: Root cap (InterPro:IPR009646); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) protein-related (TAIR:AT5G60520.1); Has 407828 Blast hits to 124211 proteins in 3571 species: Archae - 1492; Bacteria - 100012; Metazoa - 145570; Fungi - 58500; Plants - 39690; Viruses - 10531; Other Eukaryotes - 52033 (source: NCBI BLink). & (gnl|cdd|70305 : 87.6) no description available & (gnl|cdd|37135 : 84.3) no description available & (reliability: 782.0) & (original description: Putative LEA1, Description = Late embryogenic abundant protein, PFAM = PF06830)' T '33.2' 'development.late embryogenesis abundant' 'niben101scf00328_478913-482401' '(p09444|lea34_goshi : 216.0) Late embryogenesis abundant protein D-34 (LEA D-34) - Gossypium hirsutum (Upland cotton) & (at3g22490 : 212.0) Seed maturation protein; CONTAINS InterPro DOMAIN/s: Seed maturation protein (InterPro:IPR007011); BEST Arabidopsis thaliana protein match is: Seed maturation protein (TAIR:AT3G22500.1); Has 198 Blast hits to 183 proteins in 40 species: Archae - 2; Bacteria - 41; Metazoa - 7; Fungi - 0; Plants - 144; Viruses - 3; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 424.0) & (original description: Putative RAB28, Description = Late embryogenesis abundant protein 31, PFAM = PF04927;PF04927;PF04927)' T '33.2' 'development.late embryogenesis abundant' 'niben101scf00509_338725-342072' '(at5g60520 : 434.0) Late embryogenesis abundant (LEA) protein-related; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Root cap (InterPro:IPR009646); BEST Arabidopsis thaliana protein match is: late embryogenesis abundant protein-related / LEA protein-related (TAIR:AT5G60530.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70305 : 93.8) no description available & (reliability: 868.0) & (original description: Putative EMB7, Description = Late embryogenesis abundant protein, PFAM = PF06830)' T '33.2' 'development.late embryogenesis abundant' 'niben101scf00682_13495-17610' '(at2g36640 : 114.0) Encodes putative phosphotyrosine protein belonging to late embryogenesis abundant (LEA) protein in group 3 that might be involved in maturation and desiccation tolerance of seeds. RFLP and CAPS mapping place it on chromosome 4 but the nucleotide sequence maps it to chromosome 2.; embryonic cell protein 63 (ECP63); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: fruit, seed; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 4 (InterPro:IPR004238); BEST Arabidopsis thaliana protein match is: late embryogenesis abundant protein, putative / LEA protein, putative (TAIR:AT3G53040.1); Has 29213 Blast hits to 16834 proteins in 2229 species: Archae - 326; Bacteria - 11175; Metazoa - 5508; Fungi - 2029; Plants - 3175; Viruses - 194; Other Eukaryotes - 6806 (source: NCBI BLink). & (p20075|lead8_dauca : 81.3) Embryonic protein DC-8 - Daucus carota (Carrot) & (reliability: 228.0) & (original description: Putative MP2, Description = Late embryongenesis abundant protein, PFAM = PF02987;PF02987;PF02987;PF02987;PF02987)' T '33.2' 'development.late embryogenesis abundant' 'niben101scf01056_430811-434915' '(at3g19430 : 363.0) late embryogenesis abundant protein-related / LEA protein-related; CONTAINS InterPro DOMAIN/s: Root cap (InterPro:IPR009646); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) protein-related (TAIR:AT5G60520.1); Has 407828 Blast hits to 124211 proteins in 3571 species: Archae - 1492; Bacteria - 100012; Metazoa - 145570; Fungi - 58500; Plants - 39690; Viruses - 10531; Other Eukaryotes - 52033 (source: NCBI BLink). & (gnl|cdd|70305 : 88.0) no description available & (reliability: 726.0) & (original description: Putative Sb03g047140, Description = Putative uncharacterized protein Sb03g047140, PFAM = PF06830)' T '33.2' 'development.late embryogenesis abundant' 'niben101scf01350_387168-391332' '(at3g19430 : 391.0) late embryogenesis abundant protein-related / LEA protein-related; CONTAINS InterPro DOMAIN/s: Root cap (InterPro:IPR009646); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) protein-related (TAIR:AT5G60520.1); Has 407828 Blast hits to 124211 proteins in 3571 species: Archae - 1492; Bacteria - 100012; Metazoa - 145570; Fungi - 58500; Plants - 39690; Viruses - 10531; Other Eukaryotes - 52033 (source: NCBI BLink). & (gnl|cdd|70305 : 87.6) no description available & (gnl|cdd|37135 : 82.0) no description available & (reliability: 782.0) & (original description: Putative LEA1, Description = Late embryogenic abundant protein, PFAM = PF06830)' T '33.2' 'development.late embryogenesis abundant' 'niben101scf01428_63600-68147' '(at3g19430 : 391.0) late embryogenesis abundant protein-related / LEA protein-related; CONTAINS InterPro DOMAIN/s: Root cap (InterPro:IPR009646); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) protein-related (TAIR:AT5G60520.1); Has 407828 Blast hits to 124211 proteins in 3571 species: Archae - 1492; Bacteria - 100012; Metazoa - 145570; Fungi - 58500; Plants - 39690; Viruses - 10531; Other Eukaryotes - 52033 (source: NCBI BLink). & (gnl|cdd|70305 : 89.9) no description available & (reliability: 782.0) & (original description: Putative EMB7, Description = Root cap/late embryogenesis-like protein, PFAM = PF06830)' T '33.2' 'development.late embryogenesis abundant' 'niben101scf01611_417509-421705' '(at3g19430 : 356.0) late embryogenesis abundant protein-related / LEA protein-related; CONTAINS InterPro DOMAIN/s: Root cap (InterPro:IPR009646); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) protein-related (TAIR:AT5G60520.1); Has 407828 Blast hits to 124211 proteins in 3571 species: Archae - 1492; Bacteria - 100012; Metazoa - 145570; Fungi - 58500; Plants - 39690; Viruses - 10531; Other Eukaryotes - 52033 (source: NCBI BLink). & (gnl|cdd|70305 : 85.7) no description available & (reliability: 712.0) & (original description: Putative EMB7, Description = Late embryogenesis abundant protein, PFAM = PF06830)' T '33.2' 'development.late embryogenesis abundant' 'niben101scf01992_153997-157655' '(at5g54370 : 356.0) Late embryogenesis abundant (LEA) protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Root cap (InterPro:IPR009646); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) protein-related (TAIR:AT4G27400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70305 : 94.6) no description available & (reliability: 712.0) & (original description: Putative BnaA02g35500D, Description = BnaA02g35500D protein, PFAM = PF06830)' T '33.2' 'development.late embryogenesis abundant' 'niben101scf01992_154505-157162' '(at5g54370 : 403.0) Late embryogenesis abundant (LEA) protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Root cap (InterPro:IPR009646); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) protein-related (TAIR:AT4G27400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70305 : 95.3) no description available & (reliability: 806.0) & (original description: Putative At5g54370, Description = At5g54370, PFAM = PF06830)' T '33.2' 'development.late embryogenesis abundant' 'niben101scf02389_5031-8970' '(at2g36640 : 90.1) Encodes putative phosphotyrosine protein belonging to late embryogenesis abundant (LEA) protein in group 3 that might be involved in maturation and desiccation tolerance of seeds. RFLP and CAPS mapping place it on chromosome 4 but the nucleotide sequence maps it to chromosome 2.; embryonic cell protein 63 (ECP63); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: fruit, seed; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 4 (InterPro:IPR004238); BEST Arabidopsis thaliana protein match is: late embryogenesis abundant protein, putative / LEA protein, putative (TAIR:AT3G53040.1); Has 29213 Blast hits to 16834 proteins in 2229 species: Archae - 326; Bacteria - 11175; Metazoa - 5508; Fungi - 2029; Plants - 3175; Viruses - 194; Other Eukaryotes - 6806 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative ECP63, Description = Late embryogenesis abundant protein (AtECP63), PFAM = PF02987;PF02987;PF02987;PF02987;PF02987)' T '33.2' 'development.late embryogenesis abundant' 'niben101scf02832_191285-195539' '(at3g19430 : 378.0) late embryogenesis abundant protein-related / LEA protein-related; CONTAINS InterPro DOMAIN/s: Root cap (InterPro:IPR009646); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) protein-related (TAIR:AT5G60520.1); Has 407828 Blast hits to 124211 proteins in 3571 species: Archae - 1492; Bacteria - 100012; Metazoa - 145570; Fungi - 58500; Plants - 39690; Viruses - 10531; Other Eukaryotes - 52033 (source: NCBI BLink). & (gnl|cdd|70305 : 86.5) no description available & (reliability: 756.0) & (original description: Putative LEA1, Description = Late embryogenic abundant protein, PFAM = PF06830)' T '33.2' 'development.late embryogenesis abundant' 'niben101scf03239_258939-262618' '(gnl|cdd|66818 : 235.0) no description available & (p46519|lea14_soybn : 212.0) Desiccation protectant protein Lea14 homolog - Glycine max (Soybean) & (at1g01470 : 183.0) Encodes late-embryogenesis abundant protein whose mRNA levels are induced in response to wounding and light stress. Might be involved in protection against dessication.; LATE EMBRYOGENESIS ABUNDANT 14 (LEA14); CONTAINS InterPro DOMAIN/s: Water stress and hypersensitive response domain (InterPro:IPR013990), Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (TAIR:AT2G46140.1); Has 340 Blast hits to 340 proteins in 93 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 329; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative lea, Description = Late embryogenesis abundant protein, PFAM = PF03168)' T '33.2' 'development.late embryogenesis abundant' 'niben101scf03239_427555-430352' '(gnl|cdd|66818 : 227.0) no description available & (p46519|lea14_soybn : 198.0) Desiccation protectant protein Lea14 homolog - Glycine max (Soybean) & (at2g46140 : 167.0) Late embryogenesis abundant protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to desiccation, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Water stress and hypersensitive response domain (InterPro:IPR013990), Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (TAIR:AT1G01470.1); Has 348 Blast hits to 348 proteins in 99 species: Archae - 0; Bacteria - 22; Metazoa - 0; Fungi - 0; Plants - 325; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative lea, Description = Late embryogenesis abundant protein, PFAM = PF03168)' T '33.2' 'development.late embryogenesis abundant' 'niben101scf03450_302303-315290' '(p09444|lea34_goshi : 169.0) Late embryogenesis abundant protein D-34 (LEA D-34) - Gossypium hirsutum (Upland cotton) & (at3g22490 : 160.0) Seed maturation protein; CONTAINS InterPro DOMAIN/s: Seed maturation protein (InterPro:IPR007011); BEST Arabidopsis thaliana protein match is: Seed maturation protein (TAIR:AT3G22500.1); Has 198 Blast hits to 183 proteins in 40 species: Archae - 2; Bacteria - 41; Metazoa - 7; Fungi - 0; Plants - 144; Viruses - 3; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative ECP31, Description = AtECP31, PFAM = PF04927;PF04927;PF04927)' T '33.2' 'development.late embryogenesis abundant' 'niben101scf03894_265517-282723' '(at3g50790 : 509.0) esterase/lipase/thioesterase family protein; FUNCTIONS IN: hydrolase activity, carboxylesterase activity; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0017, hydrolase-like, conserved site (InterPro:IPR000952), AB-hydrolase YheT, putative (InterPro:IPR012020), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G49950.1); Has 2554 Blast hits to 2547 proteins in 951 species: Archae - 0; Bacteria - 1494; Metazoa - 334; Fungi - 200; Plants - 135; Viruses - 0; Other Eukaryotes - 391 (source: NCBI BLink). & (gnl|cdd|37049 : 368.0) no description available & (gnl|cdd|30778 : 246.0) no description available & (reliability: 1018.0) & (original description: Putative EMB8, Description = Uncharacterized protein family UPF0017, hydrolase-like, conserved site-containing protein, PFAM = PF00561)' T '33.2' 'development.late embryogenesis abundant' 'niben101scf04526_335578-338589' '(at5g06760 : 90.5) Encodes LEA4-5, a member of the Late Embryogenesis Abundant (LEA) proteins which typically accumulate in response to low water availability conditions imposed during development or by the environment. Most of thediverse set of LEA proteins can be grouped according to properties such as high hydrophilicity and high content of glycine or other small amino acids in what has been termed hydrophilins. LEA4-5 protects enzyme activities from the adverse effects induced by freeze-thaw cycles in vitro.; Late Embryogenesis Abundant 4-5 (LEA4-5); CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 1 (InterPro:IPR005513); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q01417|pm1_soybn : 87.4) 18 kDa seed maturation protein - Glycine max (Soybean) & (reliability: 181.0) & (original description: Putative Os08g0327700, Description = Os08g0327700 protein, PFAM = PF03760)' T '33.2' 'development.late embryogenesis abundant' 'niben101scf04549_1104771-1107361' '(at5g60520 : 434.0) Late embryogenesis abundant (LEA) protein-related; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Root cap (InterPro:IPR009646); BEST Arabidopsis thaliana protein match is: late embryogenesis abundant protein-related / LEA protein-related (TAIR:AT5G60530.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70305 : 94.9) no description available & (reliability: 868.0) & (original description: Putative BnaC09g35810D, Description = BnaC09g35810D protein, PFAM = PF06830)' T '33.2' 'development.late embryogenesis abundant' 'niben101scf05183_1037329-1040294' '(at2g44060 : 409.0) Late embryogenesis abundant protein, group 2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion, response to desiccation, embryo development ending in seed dormancy; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Water stress and hypersensitive response domain (InterPro:IPR013990), Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (TAIR:AT1G01470.1); Has 294 Blast hits to 286 proteins in 78 species: Archae - 4; Bacteria - 52; Metazoa - 0; Fungi - 0; Plants - 235; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|66818 : 168.0) no description available & (p46518|lea14_goshi : 87.0) Late embryogenesis abundant protein Lea14-A - Gossypium hirsutum (Upland cotton) & (reliability: 818.0) & (original description: Putative LEA, Description = Late embryogenesis abundant protein, PFAM = PF03168;PF03168)' T '33.2' 'development.late embryogenesis abundant' 'niben101scf06473_15578-20099' '(p20075|lead8_dauca : 107.0) Embryonic protein DC-8 - Daucus carota (Carrot) & (at2g36640 : 92.8) Encodes putative phosphotyrosine protein belonging to late embryogenesis abundant (LEA) protein in group 3 that might be involved in maturation and desiccation tolerance of seeds. RFLP and CAPS mapping place it on chromosome 4 but the nucleotide sequence maps it to chromosome 2.; embryonic cell protein 63 (ECP63); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: fruit, seed; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 4 (InterPro:IPR004238); BEST Arabidopsis thaliana protein match is: late embryogenesis abundant protein, putative / LEA protein, putative (TAIR:AT3G53040.1); Has 29213 Blast hits to 16834 proteins in 2229 species: Archae - 326; Bacteria - 11175; Metazoa - 5508; Fungi - 2029; Plants - 3175; Viruses - 194; Other Eukaryotes - 6806 (source: NCBI BLink). & (reliability: 185.6) & (original description: Putative ECP63, Description = LEA protein group 3, PFAM = PF02987;PF02987;PF02987)' T '33.2' 'development.late embryogenesis abundant' 'niben101scf06876_207970-212955' '(at5g27980 : 113.0) Seed maturation protein; CONTAINS InterPro DOMAIN/s: Seed maturation protein (InterPro:IPR007011); BEST Arabidopsis thaliana protein match is: Seed maturation protein (TAIR:AT3G22490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p09444|lea34_goshi : 110.0) Late embryogenesis abundant protein D-34 (LEA D-34) - Gossypium hirsutum (Upland cotton) & (reliability: 206.0) & (original description: Putative At5g27980, Description = Late embryogenesis abundant protein 47, PFAM = PF04927;PF04927)' T '33.2' 'development.late embryogenesis abundant' 'niben101scf06888_66821-70354' '(at3g22490 : 197.0) Seed maturation protein; CONTAINS InterPro DOMAIN/s: Seed maturation protein (InterPro:IPR007011); BEST Arabidopsis thaliana protein match is: Seed maturation protein (TAIR:AT3G22500.1); Has 198 Blast hits to 183 proteins in 40 species: Archae - 2; Bacteria - 41; Metazoa - 7; Fungi - 0; Plants - 144; Viruses - 3; Other Eukaryotes - 1 (source: NCBI BLink). & (p09444|lea34_goshi : 185.0) Late embryogenesis abundant protein D-34 (LEA D-34) - Gossypium hirsutum (Upland cotton) & (reliability: 394.0) & (original description: Putative RAB28, Description = Late embryogenesis abundant protein 31, PFAM = PF04927;PF04927;PF04927)' T '33.2' 'development.late embryogenesis abundant' 'niben101scf07563_80945-84651' '(at3g19430 : 359.0) late embryogenesis abundant protein-related / LEA protein-related; CONTAINS InterPro DOMAIN/s: Root cap (InterPro:IPR009646); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) protein-related (TAIR:AT5G60520.1); Has 407828 Blast hits to 124211 proteins in 3571 species: Archae - 1492; Bacteria - 100012; Metazoa - 145570; Fungi - 58500; Plants - 39690; Viruses - 10531; Other Eukaryotes - 52033 (source: NCBI BLink). & (gnl|cdd|70305 : 91.5) no description available & (reliability: 718.0) & (original description: Putative LEA1, Description = Late embryogenic abundant protein, PFAM = PF06830)' T '33.2' 'development.late embryogenesis abundant' 'niben101scf09057_46584-49613' '(gnl|cdd|66818 : 203.0) no description available & (p46519|lea14_soybn : 185.0) Desiccation protectant protein Lea14 homolog - Glycine max (Soybean) & (at2g46140 : 157.0) Late embryogenesis abundant protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to desiccation, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Water stress and hypersensitive response domain (InterPro:IPR013990), Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (TAIR:AT1G01470.1); Has 348 Blast hits to 348 proteins in 99 species: Archae - 0; Bacteria - 22; Metazoa - 0; Fungi - 0; Plants - 325; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative Cdes, Description = Late embryogenesis abundant protein, PFAM = PF03168)' T '33.2' 'development.late embryogenesis abundant' 'niben101scf09512_73942-76663' '(gnl|cdd|66818 : 225.0) no description available & (p46519|lea14_soybn : 201.0) Desiccation protectant protein Lea14 homolog - Glycine max (Soybean) & (at2g46140 : 166.0) Late embryogenesis abundant protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to desiccation, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Water stress and hypersensitive response domain (InterPro:IPR013990), Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (TAIR:AT1G01470.1); Has 348 Blast hits to 348 proteins in 99 species: Archae - 0; Bacteria - 22; Metazoa - 0; Fungi - 0; Plants - 325; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative Lea, Description = Late embryogenesis-like protein, PFAM = PF03168)' T '33.2' 'development.late embryogenesis abundant' 'niben101scf10737_173515-176143' '(gnl|cdd|66886 : 110.0) no description available & (at4g02380 : 80.5) Encodes AtLEA5 (late embryogenesis abundant like protein). Also known as SENESCENCE-ASSOCIATED GENE 21 (SAG21). Has a role on oxidative stress tolerance. mRNA levels are elevated in response to various stresses.; senescence-associated gene 21 (SAG21); CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 3 (InterPro:IPR004926); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant 3 (LEA3) family protein (TAIR:AT1G02820.1); Has 166 Blast hits to 166 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 166; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative SAG21, Description = Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial, PFAM = PF03242)' T '33.2' 'development.late embryogenesis abundant' 'niben101scf11383_7768-10332' '(at5g27980 : 110.0) Seed maturation protein; CONTAINS InterPro DOMAIN/s: Seed maturation protein (InterPro:IPR007011); BEST Arabidopsis thaliana protein match is: Seed maturation protein (TAIR:AT3G22490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p09444|lea34_goshi : 103.0) Late embryogenesis abundant protein D-34 (LEA D-34) - Gossypium hirsutum (Upland cotton) & (reliability: 204.0) & (original description: Putative ECP31, Description = AtECP31, PFAM = PF04927;PF04927)' T '33.2' 'development.late embryogenesis abundant' 'niben101scf14210_85597-90404' '(at2g44060 : 426.0) Late embryogenesis abundant protein, group 2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion, response to desiccation, embryo development ending in seed dormancy; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Water stress and hypersensitive response domain (InterPro:IPR013990), Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (TAIR:AT1G01470.1); Has 294 Blast hits to 286 proteins in 78 species: Archae - 4; Bacteria - 52; Metazoa - 0; Fungi - 0; Plants - 235; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|66818 : 170.0) no description available & (p46518|lea14_goshi : 87.0) Late embryogenesis abundant protein Lea14-A - Gossypium hirsutum (Upland cotton) & (reliability: 852.0) & (original description: Putative LEA, Description = Late embryogenesis abundant protein, PFAM = PF03168;PF03168)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'nbv0.3scaffold3889_1-13132' '(at5g18830 : 596.0) Encodes a member of the Squamosa Binding Protein family of transcriptional regulators. SPL7 is expressed highly in roots and appears to play a role in copper homeostasis. Mutants are hypersensitive to copper deficient conditions and display a retarded growth phenotype. SPL7 binds to the promoter of the copper responsive miRNAs miR398b and miR389c.; squamosa promoter binding protein-like 7 (SPL7); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: copper ion homeostasis, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 1 (TAIR:AT2G47070.1). & (gnl|cdd|66763 : 133.0) no description available & (q38741|sbp1_antma : 80.1) Squamosa promoter-binding protein 1 - Antirrhinum majus (Garden snapdragon) & (reliability: 1192.0) & (original description: Putative SPL7, Description = Squamosa promoter-binding-like protein 7, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'nbv0.3scaffold5484_29768-33669' '(at5g50570 : 146.0) Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (TAIR:AT5G50670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66763 : 132.0) no description available & (q38740|sbp2_antma : 108.0) Squamosa promoter-binding protein 2 - Antirrhinum majus (Garden snapdragon) & (reliability: 292.0) & (original description: Putative SPL1, Description = SBP-box transcription factor, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'nbv0.3scaffold16810_12442-20068' '(at2g42200 : 102.0) Encodes a putative transcriptional regulator that is involved in the vegetative to reproductive phase transition. Expression is regulated by MIR156b. SPL activity nonautonomously inhibits initiation of new leaves at the shoot apical meristem.; squamosa promoter binding protein-like 9 (SPL9); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, regulation of leaf formation, leaf development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 15 (TAIR:AT3G57920.1); Has 3664 Blast hits to 3108 proteins in 157 species: Archae - 2; Bacteria - 85; Metazoa - 116; Fungi - 125; Plants - 880; Viruses - 2; Other Eukaryotes - 2454 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative sbph5, Description = Squamosa promoter binding protein-homologue 5, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'nbv0.3scaffold19653_8017-24393' '(at3g60030 : 755.0) squamosa promoter-binding protein-like 12 (SPL12); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 1 (TAIR:AT2G47070.1); Has 969 Blast hits to 908 proteins in 50 species: Archae - 0; Bacteria - 2; Metazoa - 21; Fungi - 0; Plants - 938; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|66763 : 147.0) no description available & (q38741|sbp1_antma : 94.4) Squamosa promoter-binding protein 1 - Antirrhinum majus (Garden snapdragon) & (reliability: 1510.0) & (original description: Putative SPL12, Description = Squamosa promoter-binding-like protein 12, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'nbv0.3scaffold47118_1568-5854' '(gnl|cdd|66763 : 113.0) no description available & (at3g60030 : 98.6) squamosa promoter-binding protein-like 12 (SPL12); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 1 (TAIR:AT2G47070.1); Has 969 Blast hits to 908 proteins in 50 species: Archae - 0; Bacteria - 2; Metazoa - 21; Fungi - 0; Plants - 938; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (o04003|lg1_maize : 90.5) LIGULELESS1 protein - Zea mays (Maize) & (reliability: 197.2) & (original description: Putative SPL4, Description = Squamosa promoter-binding-like protein 4, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'nbv0.5scaffold1169_57934-64817' '(at1g69170 : 151.0) Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 14 (TAIR:AT1G20980.1); Has 836 Blast hits to 835 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 834; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66763 : 145.0) no description available & (q38740|sbp2_antma : 122.0) Squamosa promoter-binding protein 2 - Antirrhinum majus (Garden snapdragon) & (reliability: 302.0) & (original description: Putative SPL6, Description = SQUAMOSA promoter binding-like transcription factor, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'nbv0.5scaffold1623_224908-227835' '(at2g42200 : 108.0) Encodes a putative transcriptional regulator that is involved in the vegetative to reproductive phase transition. Expression is regulated by MIR156b. SPL activity nonautonomously inhibits initiation of new leaves at the shoot apical meristem.; squamosa promoter binding protein-like 9 (SPL9); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, regulation of leaf formation, leaf development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 15 (TAIR:AT3G57920.1); Has 3664 Blast hits to 3108 proteins in 157 species: Archae - 2; Bacteria - 85; Metazoa - 116; Fungi - 125; Plants - 880; Viruses - 2; Other Eukaryotes - 2454 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative sbph4, Description = SBP-box protein, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'nbv0.5scaffold4191_185299-190391' '(at5g43270 : 183.0) member of the SPL (squamosa-promoter binding protein-like) gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. In conjunction with SPL10 and SPL11, SPL2 redundantly controls proper development of lateral organs in association with shoot maturation in the reproductive phase.; squamosa promoter binding protein-like 2 (SPL2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, regulation of timing of transition from vegetative to reproductive phase; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 10 (TAIR:AT1G27370.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66763 : 145.0) no description available & (o04003|lg1_maize : 113.0) LIGULELESS1 protein - Zea mays (Maize) & (reliability: 366.0) & (original description: Putative SPL2, Description = SBP-box 2, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben044scf00002173ctg001_1373-5858' '(at5g18830 : 164.0) Encodes a member of the Squamosa Binding Protein family of transcriptional regulators. SPL7 is expressed highly in roots and appears to play a role in copper homeostasis. Mutants are hypersensitive to copper deficient conditions and display a retarded growth phenotype. SPL7 binds to the promoter of the copper responsive miRNAs miR398b and miR389c.; squamosa promoter binding protein-like 7 (SPL7); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: copper ion homeostasis, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 1 (TAIR:AT2G47070.1). & (reliability: 328.0) & (original description: Putative SPL7, Description = Squamosa promoter binding protein NtabSPL7, PFAM = )' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben044scf00002173ctg003_1-4141' '(at5g18830 : 394.0) Encodes a member of the Squamosa Binding Protein family of transcriptional regulators. SPL7 is expressed highly in roots and appears to play a role in copper homeostasis. Mutants are hypersensitive to copper deficient conditions and display a retarded growth phenotype. SPL7 binds to the promoter of the copper responsive miRNAs miR398b and miR389c.; squamosa promoter binding protein-like 7 (SPL7); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: copper ion homeostasis, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 1 (TAIR:AT2G47070.1). & (gnl|cdd|66763 : 130.0) no description available & (reliability: 788.0) & (original description: Putative sbp2, Description = Squamosa promoter-binding-like protein, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben044scf00018596ctg007_1-2658' '(at1g02065 : 192.0) Encodes an SBP-box gene, a member of the SPL gene family. Mutants are affected in micro- and megasporogenesis, trichome formation on sepals, and stamen filament elongation.; squamosa promoter binding protein-like 8 (SPL8); CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 2 (TAIR:AT5G43270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66763 : 128.0) no description available & (o04003|lg1_maize : 124.0) LIGULELESS1 protein - Zea mays (Maize) & (reliability: 384.0) & (original description: Putative sbph3, Description = Squamosa promoter binding protein-homologue 3, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben044scf00021643ctg003_3455-7401' '(at1g02065 : 219.0) Encodes an SBP-box gene, a member of the SPL gene family. Mutants are affected in micro- and megasporogenesis, trichome formation on sepals, and stamen filament elongation.; squamosa promoter binding protein-like 8 (SPL8); CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 2 (TAIR:AT5G43270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66763 : 133.0) no description available & (o04003|lg1_maize : 130.0) LIGULELESS1 protein - Zea mays (Maize) & (reliability: 438.0) & (original description: Putative SPL8, Description = Squamosa promoter-binding-like protein 8, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben044scf00027474ctg007_3440-7341' '(at5g50570 : 159.0) Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (TAIR:AT5G50670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66763 : 133.0) no description available & (q38740|sbp2_antma : 108.0) Squamosa promoter-binding protein 2 - Antirrhinum majus (Garden snapdragon) & (reliability: 318.0) & (original description: Putative SPL1, Description = SBP-box transcription factor, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben044scf00043379ctg002_14135-19196' '(at3g57920 : 149.0) Encodes a putative transcriptional regulator that is involved in the vegetative to reproductive phase transition. Expression is regulated by MIR156b.; squamosa promoter binding protein-like 15 (SPL15); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, regulation of cell size, regulation of cell proliferation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 9 (TAIR:AT2G42200.1); Has 832 Blast hits to 831 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 829; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66763 : 140.0) no description available & (o04003|lg1_maize : 118.0) LIGULELESS1 protein - Zea mays (Maize) & (reliability: 298.0) & (original description: Putative sbph5, Description = Squamosa promoter binding protein-homologue 5, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben101scf00037_219890-222297' '(gnl|cdd|66763 : 85.0) no description available & (at3g57920 : 82.4) Encodes a putative transcriptional regulator that is involved in the vegetative to reproductive phase transition. Expression is regulated by MIR156b.; squamosa promoter binding protein-like 15 (SPL15); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, regulation of cell size, regulation of cell proliferation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 9 (TAIR:AT2G42200.1); Has 832 Blast hits to 831 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 829; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative lgl, Description = Squamosa promoter-binding-like protein, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben101scf00337_628684-634995' '(at1g69170 : 151.0) Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 14 (TAIR:AT1G20980.1); Has 836 Blast hits to 835 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 834; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66763 : 144.0) no description available & (q38740|sbp2_antma : 115.0) Squamosa promoter-binding protein 2 - Antirrhinum majus (Garden snapdragon) & (reliability: 302.0) & (original description: Putative SPL6, Description = SQUAMOSA promoter binding-like transcription factor, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben101scf00347_76465-80915' '(at3g60030 : 123.0) squamosa promoter-binding protein-like 12 (SPL12); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 1 (TAIR:AT2G47070.1); Has 969 Blast hits to 908 proteins in 50 species: Archae - 0; Bacteria - 2; Metazoa - 21; Fungi - 0; Plants - 938; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|66763 : 119.0) no description available & (o04003|lg1_maize : 110.0) LIGULELESS1 protein - Zea mays (Maize) & (reliability: 246.0) & (original description: Putative SPL4, Description = SBP-box 4, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben101scf00878_474309-477627' '(at1g02065 : 191.0) Encodes an SBP-box gene, a member of the SPL gene family. Mutants are affected in micro- and megasporogenesis, trichome formation on sepals, and stamen filament elongation.; squamosa promoter binding protein-like 8 (SPL8); CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 2 (TAIR:AT5G43270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66763 : 126.0) no description available & (o04003|lg1_maize : 125.0) LIGULELESS1 protein - Zea mays (Maize) & (reliability: 382.0) & (original description: Putative lgl, Description = Squamosa promoter-binding-like protein, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben101scf00878_474333-479345' '(at1g02065 : 193.0) Encodes an SBP-box gene, a member of the SPL gene family. Mutants are affected in micro- and megasporogenesis, trichome formation on sepals, and stamen filament elongation.; squamosa promoter binding protein-like 8 (SPL8); CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 2 (TAIR:AT5G43270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66763 : 126.0) no description available & (o04003|lg1_maize : 121.0) LIGULELESS1 protein - Zea mays (Maize) & (reliability: 386.0) & (original description: Putative lgl, Description = Squamosa promoter-binding-like protein, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben101scf01143_600094-613112' '(at1g69170 : 147.0) Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 14 (TAIR:AT1G20980.1); Has 836 Blast hits to 835 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 834; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66763 : 145.0) no description available & (q38740|sbp2_antma : 121.0) Squamosa promoter-binding protein 2 - Antirrhinum majus (Garden snapdragon) & (reliability: 294.0) & (original description: Putative SPL6, Description = SQUAMOSA promoter binding-like transcription factor, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben101scf01310_35948-40834' '(at1g69170 : 171.0) Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 14 (TAIR:AT1G20980.1); Has 836 Blast hits to 835 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 834; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66763 : 143.0) no description available & (q38741|sbp1_antma : 115.0) Squamosa promoter-binding protein 1 - Antirrhinum majus (Garden snapdragon) & (reliability: 342.0) & (original description: Putative SPL6, Description = SQUAMOSA promoter binding protein-like protein 6, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben101scf01426_515498-520162' '(at3g60030 : 129.0) squamosa promoter-binding protein-like 12 (SPL12); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 1 (TAIR:AT2G47070.1); Has 969 Blast hits to 908 proteins in 50 species: Archae - 0; Bacteria - 2; Metazoa - 21; Fungi - 0; Plants - 938; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (o04003|lg1_maize : 120.0) LIGULELESS1 protein - Zea mays (Maize) & (gnl|cdd|66763 : 120.0) no description available & (reliability: 258.0) & (original description: Putative SPL4, Description = Squamosa promoter-binding-like protein 4, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben101scf01602_282860-288070' '(at5g43270 : 184.0) member of the SPL (squamosa-promoter binding protein-like) gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. In conjunction with SPL10 and SPL11, SPL2 redundantly controls proper development of lateral organs in association with shoot maturation in the reproductive phase.; squamosa promoter binding protein-like 2 (SPL2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, regulation of timing of transition from vegetative to reproductive phase; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 10 (TAIR:AT1G27370.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66763 : 146.0) no description available & (o04003|lg1_maize : 113.0) LIGULELESS1 protein - Zea mays (Maize) & (reliability: 368.0) & (original description: Putative SPL3, Description = Squamosa promoter-binding-like protein 3, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben101scf01671_351646-368296' '(at3g60030 : 736.0) squamosa promoter-binding protein-like 12 (SPL12); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 1 (TAIR:AT2G47070.1); Has 969 Blast hits to 908 proteins in 50 species: Archae - 0; Bacteria - 2; Metazoa - 21; Fungi - 0; Plants - 938; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|66763 : 148.0) no description available & (q38741|sbp1_antma : 102.0) Squamosa promoter-binding protein 1 - Antirrhinum majus (Garden snapdragon) & (reliability: 1472.0) & (original description: Putative SPL1, Description = Squamosa promoter-binding-like protein, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben101scf01773_393336-401959' '(at2g47070 : 834.0) member of SPL gene family, encodes DNA binding proteins and putative transcription factors. All have the SBP-box, which encodes the SBP-domain, required for and sufficient for interaction with DNA.; squamosa promoter binding protein-like 1 (SPL1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: squamosa promoter-binding protein-like 12 (TAIR:AT3G60030.1); Has 940 Blast hits to 885 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 930; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|66763 : 148.0) no description available & (q38741|sbp1_antma : 124.0) Squamosa promoter-binding protein 1 - Antirrhinum majus (Garden snapdragon) & (reliability: 1668.0) & (original description: Putative SPL1, Description = Squamosa promoter-binding-like protein 1, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben101scf01950_205169-209070' '(at5g50570 : 146.0) Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (TAIR:AT5G50670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66763 : 131.0) no description available & (q38740|sbp2_antma : 108.0) Squamosa promoter-binding protein 2 - Antirrhinum majus (Garden snapdragon) & (reliability: 292.0) & (original description: Putative SPL21, Description = SQUAMOSA promoter binding-like transcription factor, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben101scf02151_414176-418858' '(at1g69170 : 177.0) Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 14 (TAIR:AT1G20980.1); Has 836 Blast hits to 835 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 834; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66763 : 141.0) no description available & (o04003|lg1_maize : 114.0) LIGULELESS1 protein - Zea mays (Maize) & (reliability: 354.0) & (original description: Putative SPL22, Description = SQUAMOSA promoter binding-like transcription factor, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben101scf02558_183199-191425' '(at3g60030 : 813.0) squamosa promoter-binding protein-like 12 (SPL12); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 1 (TAIR:AT2G47070.1); Has 969 Blast hits to 908 proteins in 50 species: Archae - 0; Bacteria - 2; Metazoa - 21; Fungi - 0; Plants - 938; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|66763 : 148.0) no description available & (q38741|sbp1_antma : 127.0) Squamosa promoter-binding protein 1 - Antirrhinum majus (Garden snapdragon) & (reliability: 1626.0) & (original description: Putative SPL12, Description = Squamosa promoter-binding-like protein 12, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben101scf03056_20398-27281' '(at1g69170 : 150.0) Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 14 (TAIR:AT1G20980.1); Has 836 Blast hits to 835 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 834; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66763 : 147.0) no description available & (q38740|sbp2_antma : 122.0) Squamosa promoter-binding protein 2 - Antirrhinum majus (Garden snapdragon) & (reliability: 300.0) & (original description: Putative SPL6, Description = SQUAMOSA promoter binding-like transcription factor, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben101scf03494_1295926-1303697' '(at2g42200 : 179.0) Encodes a putative transcriptional regulator that is involved in the vegetative to reproductive phase transition. Expression is regulated by MIR156b. SPL activity nonautonomously inhibits initiation of new leaves at the shoot apical meristem.; squamosa promoter binding protein-like 9 (SPL9); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, regulation of leaf formation, leaf development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 15 (TAIR:AT3G57920.1); Has 3664 Blast hits to 3108 proteins in 157 species: Archae - 2; Bacteria - 85; Metazoa - 116; Fungi - 125; Plants - 880; Viruses - 2; Other Eukaryotes - 2454 (source: NCBI BLink). & (gnl|cdd|66763 : 153.0) no description available & (q38740|sbp2_antma : 122.0) Squamosa promoter-binding protein 2 - Antirrhinum majus (Garden snapdragon) & (reliability: 358.0) & (original description: Putative sbph5, Description = Squamosa promoter binding protein-homologue 5, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben101scf04350_332370-338378' '(at3g60030 : 134.0) squamosa promoter-binding protein-like 12 (SPL12); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 1 (TAIR:AT2G47070.1); Has 969 Blast hits to 908 proteins in 50 species: Archae - 0; Bacteria - 2; Metazoa - 21; Fungi - 0; Plants - 938; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q38741|sbp1_antma : 121.0) Squamosa promoter-binding protein 1 - Antirrhinum majus (Garden snapdragon) & (gnl|cdd|66763 : 119.0) no description available & (reliability: 268.0) & (original description: Putative SBP1, Description = Squamosa promoter-binding protein 1, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben101scf04740_78631-85595' '(at3g57920 : 154.0) Encodes a putative transcriptional regulator that is involved in the vegetative to reproductive phase transition. Expression is regulated by MIR156b.; squamosa promoter binding protein-like 15 (SPL15); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, regulation of cell size, regulation of cell proliferation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 9 (TAIR:AT2G42200.1); Has 832 Blast hits to 831 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 829; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66763 : 144.0) no description available & (o04003|lg1_maize : 117.0) LIGULELESS1 protein - Zea mays (Maize) & (reliability: 308.0) & (original description: Putative sbph4, Description = Squamosa promoter binding protein-homologue 4, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben101scf06461_342272-346333' '(at5g43270 : 140.0) member of the SPL (squamosa-promoter binding protein-like) gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. In conjunction with SPL10 and SPL11, SPL2 redundantly controls proper development of lateral organs in association with shoot maturation in the reproductive phase.; squamosa promoter binding protein-like 2 (SPL2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, regulation of timing of transition from vegetative to reproductive phase; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 10 (TAIR:AT1G27370.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66763 : 134.0) no description available & (o04003|lg1_maize : 119.0) LIGULELESS1 protein - Zea mays (Maize) & (reliability: 280.0) & (original description: Putative lgl, Description = Squamosa promoter-binding-like protein, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben101scf07953_38706-43610' '(gnl|cdd|66763 : 116.0) no description available & (at3g60030 : 114.0) squamosa promoter-binding protein-like 12 (SPL12); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 1 (TAIR:AT2G47070.1); Has 969 Blast hits to 908 proteins in 50 species: Archae - 0; Bacteria - 2; Metazoa - 21; Fungi - 0; Plants - 938; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q38741|sbp1_antma : 102.0) Squamosa promoter-binding protein 1 - Antirrhinum majus (Garden snapdragon) & (reliability: 228.0) & (original description: Putative SPL4, Description = SBP-box 4, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben101scf08391_141119-153036' '(at2g47070 : 449.0) member of SPL gene family, encodes DNA binding proteins and putative transcription factors. All have the SBP-box, which encodes the SBP-domain, required for and sufficient for interaction with DNA.; squamosa promoter binding protein-like 1 (SPL1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: squamosa promoter-binding protein-like 12 (TAIR:AT3G60030.1); Has 940 Blast hits to 885 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 930; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 898.0) & (original description: Putative SPL1, Description = Squamosa promoter-binding-like protein 1, PFAM = )' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben101scf08791_407475-410268' '(at3g60030 : 125.0) squamosa promoter-binding protein-like 12 (SPL12); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 1 (TAIR:AT2G47070.1); Has 969 Blast hits to 908 proteins in 50 species: Archae - 0; Bacteria - 2; Metazoa - 21; Fungi - 0; Plants - 938; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q38741|sbp1_antma : 124.0) Squamosa promoter-binding protein 1 - Antirrhinum majus (Garden snapdragon) & (gnl|cdd|66763 : 114.0) no description available & (reliability: 250.0) & (original description: Putative SBP1, Description = Squamosa promoter-binding protein 1, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben101scf09781_104169-112108' '(at2g47070 : 830.0) member of SPL gene family, encodes DNA binding proteins and putative transcription factors. All have the SBP-box, which encodes the SBP-domain, required for and sufficient for interaction with DNA.; squamosa promoter binding protein-like 1 (SPL1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: squamosa promoter-binding protein-like 12 (TAIR:AT3G60030.1); Has 940 Blast hits to 885 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 930; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|66763 : 149.0) no description available & (q38741|sbp1_antma : 124.0) Squamosa promoter-binding protein 1 - Antirrhinum majus (Garden snapdragon) & (reliability: 1660.0) & (original description: Putative SPL1, Description = Squamosa promoter-binding-like protein 1, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben101scf10743_205648-213369' '(gnl|cdd|66763 : 127.0) no description available & (at1g27370 : 91.3) In conjunction with SPL11 and SPL2, SPL10 redundantly controls proper development of lateral organs in association with shoot maturation in the reproductive phase. SPL10 also controls lamina shape during vegetative development.; squamosa promoter binding protein-like 10 (SPL10); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: leaf shaping, regulation of transcription, regulation of timing of transition from vegetative to reproductive phase; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter-like 11 (TAIR:AT1G27360.4); Has 868 Blast hits to 867 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q38741|sbp1_antma : 90.9) Squamosa promoter-binding protein 1 - Antirrhinum majus (Garden snapdragon) & (reliability: 182.6) & (original description: Putative SPL10, Description = SQUAMOSA promoter binding-like transcription factor, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben101scf10743_265444-269628' '(at1g02065 : 220.0) Encodes an SBP-box gene, a member of the SPL gene family. Mutants are affected in micro- and megasporogenesis, trichome formation on sepals, and stamen filament elongation.; squamosa promoter binding protein-like 8 (SPL8); CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 2 (TAIR:AT5G43270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66763 : 130.0) no description available & (o04003|lg1_maize : 128.0) LIGULELESS1 protein - Zea mays (Maize) & (reliability: 440.0) & (original description: Putative SPL8, Description = Squamosa promoter-binding-like protein 8, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben101scf19371_16242-21334' '(at5g43270 : 183.0) member of the SPL (squamosa-promoter binding protein-like) gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. In conjunction with SPL10 and SPL11, SPL2 redundantly controls proper development of lateral organs in association with shoot maturation in the reproductive phase.; squamosa promoter binding protein-like 2 (SPL2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, regulation of timing of transition from vegetative to reproductive phase; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 10 (TAIR:AT1G27370.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66763 : 146.0) no description available & (o04003|lg1_maize : 114.0) LIGULELESS1 protein - Zea mays (Maize) & (reliability: 366.0) & (original description: Putative SPL2, Description = SBP-box 2, PFAM = PF03110)' T '33.3' 'development.squamosa promoter binding like (SPL)' 'niben101scf20316_62248-66879' '(at1g69170 : 169.0) Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 14 (TAIR:AT1G20980.1); Has 836 Blast hits to 835 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 834; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66763 : 136.0) no description available & (o04003|lg1_maize : 110.0) LIGULELESS1 protein - Zea mays (Maize) & (reliability: 338.0) & (original description: Putative SPL23, Description = SQUAMOSA promoter binding-like transcription factor, PFAM = PF03110)' T '33.4' 'development.organ development' '' '' '33.4.1' 'development.organ development.shoot development.root development' '' '' '33.4.3' 'development.organ development.shoot development.shoot development' 'nbv0.3scaffold11281_15856-20051' '(at2g41370 : 629.0) Encodes BOP2, a cytoplasmic and nuclear-localized NPR1 like protein with BTB/POZ domain and ankyrin repeats. Interacts with BOP1 and appears to be genetically redundant with BOP1.bop1/bop2 double mutants have longer leaves, often with leaflets on the petiole, asymmetric flowers with extra organs and no nectaries. Also defective in floral organ abscission. BOP1/2 promotes floral meristem fate and determinacy in a pathway targetting APETALA1 and AGAMOUS-LIKE24. PUCHI, BOP1 and BOP2 are redundantly required for expression of LFY and AP1.; BLADE ON PETIOLE2 (BOP2); CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Ankyrin repeat-containing domain (InterPro:IPR020683), BTB/POZ-like (InterPro:IPR000210), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein / BTB/POZ domain-containing protein (TAIR:AT3G57130.1); Has 6067 Blast hits to 4933 proteins in 392 species: Archae - 26; Bacteria - 465; Metazoa - 2734; Fungi - 296; Plants - 944; Viruses - 70; Other Eukaryotes - 1532 (source: NCBI BLink). & (reliability: 1258.0) & (original description: Putative NPR5, Description = Regulatory protein NPR5, PFAM = PF12796;PF00651;PF11900)' T '33.4.3' 'development.organ development.shoot development.shoot development' 'nbv0.3scaffold104138_1-3555' '(at2g41370 : 642.0) Encodes BOP2, a cytoplasmic and nuclear-localized NPR1 like protein with BTB/POZ domain and ankyrin repeats. Interacts with BOP1 and appears to be genetically redundant with BOP1.bop1/bop2 double mutants have longer leaves, often with leaflets on the petiole, asymmetric flowers with extra organs and no nectaries. Also defective in floral organ abscission. BOP1/2 promotes floral meristem fate and determinacy in a pathway targetting APETALA1 and AGAMOUS-LIKE24. PUCHI, BOP1 and BOP2 are redundantly required for expression of LFY and AP1.; BLADE ON PETIOLE2 (BOP2); CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Ankyrin repeat-containing domain (InterPro:IPR020683), BTB/POZ-like (InterPro:IPR000210), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein / BTB/POZ domain-containing protein (TAIR:AT3G57130.1); Has 6067 Blast hits to 4933 proteins in 392 species: Archae - 26; Bacteria - 465; Metazoa - 2734; Fungi - 296; Plants - 944; Viruses - 70; Other Eukaryotes - 1532 (source: NCBI BLink). & (reliability: 1284.0) & (original description: Putative NPR5, Description = Regulatory protein NPR5, PFAM = PF12796;PF11900;PF00651)' T '33.4.3' 'development.organ development.shoot development.shoot development' 'niben044scf00054425ctg002_393-3848' '(at2g41370 : 616.0) Encodes BOP2, a cytoplasmic and nuclear-localized NPR1 like protein with BTB/POZ domain and ankyrin repeats. Interacts with BOP1 and appears to be genetically redundant with BOP1.bop1/bop2 double mutants have longer leaves, often with leaflets on the petiole, asymmetric flowers with extra organs and no nectaries. Also defective in floral organ abscission. BOP1/2 promotes floral meristem fate and determinacy in a pathway targetting APETALA1 and AGAMOUS-LIKE24. PUCHI, BOP1 and BOP2 are redundantly required for expression of LFY and AP1.; BLADE ON PETIOLE2 (BOP2); CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Ankyrin repeat-containing domain (InterPro:IPR020683), BTB/POZ-like (InterPro:IPR000210), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein / BTB/POZ domain-containing protein (TAIR:AT3G57130.1); Has 6067 Blast hits to 4933 proteins in 392 species: Archae - 26; Bacteria - 465; Metazoa - 2734; Fungi - 296; Plants - 944; Viruses - 70; Other Eukaryotes - 1532 (source: NCBI BLink). & (reliability: 1232.0) & (original description: Putative NPR5, Description = Regulatory protein NPR5, PFAM = PF11900;PF12796;PF00651)' T '33.4.3' 'development.organ development.shoot development.shoot development' 'niben101scf01307_154109-172217' '(at3g55510 : 493.0) REBELOTE (RBL); INVOLVED IN: floral meristem determinacy; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0120 (InterPro:IPR005343); BEST Arabidopsis thaliana protein match is: Noc2p family (TAIR:AT2G18220.1); Has 382 Blast hits to 364 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 117; Fungi - 131; Plants - 77; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|37467 : 390.0) no description available & (q8lnu5|noc2l_orysa : 310.0) Nucleolar complex protein 2 homolog (Protein NOC2 homolog) - Oryza sativa (Rice) & (gnl|cdd|67337 : 210.0) no description available & (reliability: 986.0) & (original description: Putative RBL, Description = Nucleolar complex protein 2 isoform 1, PFAM = PF03715)' T '33.4.3' 'development.organ development.shoot development.shoot development' 'niben101scf05535_130454-134832' '(at2g41370 : 616.0) Encodes BOP2, a cytoplasmic and nuclear-localized NPR1 like protein with BTB/POZ domain and ankyrin repeats. Interacts with BOP1 and appears to be genetically redundant with BOP1.bop1/bop2 double mutants have longer leaves, often with leaflets on the petiole, asymmetric flowers with extra organs and no nectaries. Also defective in floral organ abscission. BOP1/2 promotes floral meristem fate and determinacy in a pathway targetting APETALA1 and AGAMOUS-LIKE24. PUCHI, BOP1 and BOP2 are redundantly required for expression of LFY and AP1.; BLADE ON PETIOLE2 (BOP2); CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Ankyrin repeat-containing domain (InterPro:IPR020683), BTB/POZ-like (InterPro:IPR000210), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein / BTB/POZ domain-containing protein (TAIR:AT3G57130.1); Has 6067 Blast hits to 4933 proteins in 392 species: Archae - 26; Bacteria - 465; Metazoa - 2734; Fungi - 296; Plants - 944; Viruses - 70; Other Eukaryotes - 1532 (source: NCBI BLink). & (reliability: 1232.0) & (original description: Putative NPR5, Description = Regulatory protein NPR5, PFAM = PF12796;PF00651)' T '33.30' 'development.multitarget' '' '' '33.30.1' 'development.multitarget.target of rapamycin' 'nbv0.3scaffold38272_1725-17863' '(at1g50030 : 1632.0) Related to TOR proteins from yeast and mammals, regulators of cell growth in response to nutrient availability. TOR proteins belong to the family of phosphatidylinositol 3-kinase and are targets of the antiproliferative drug rapamycin. AtTOR binds the yeast FKBP12 protein in the presence of Rapamycin, is involved in embryogenesis and is expressed in embryos, endosperm and meristems.; target of rapamycin (TOR); FUNCTIONS IN: protein binding, 1-phosphatidylinositol-3-kinase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), FKBP12-rapamycin-associated protein, FKBP12-rapamycin-binding (InterPro:IPR009076), Armadillo-like helical (InterPro:IPR011989), Protein kinase-like domain (InterPro:IPR011009), PIK-related kinase, FAT (InterPro:IPR003151), PIK-related kinase (InterPro:IPR014009), Armadillo-type fold (InterPro:IPR016024), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), PIK-related kinase, FATC (InterPro:IPR003152); BEST Arabidopsis thaliana protein match is: Ataxia telangiectasia-mutated and RAD3-related (TAIR:AT5G40820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36109 : 631.0) no description available & (gnl|cdd|34637 : 193.0) no description available & (reliability: 3264.0) & (original description: Putative TOR, Description = Serine/threonine-protein kinase TOR, PFAM = PF11865)' T '33.30.1' 'development.multitarget.target of rapamycin' 'nbv0.3scaffold45856_1-16658' '(at1g50030 : 2169.0) Related to TOR proteins from yeast and mammals, regulators of cell growth in response to nutrient availability. TOR proteins belong to the family of phosphatidylinositol 3-kinase and are targets of the antiproliferative drug rapamycin. AtTOR binds the yeast FKBP12 protein in the presence of Rapamycin, is involved in embryogenesis and is expressed in embryos, endosperm and meristems.; target of rapamycin (TOR); FUNCTIONS IN: protein binding, 1-phosphatidylinositol-3-kinase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), FKBP12-rapamycin-associated protein, FKBP12-rapamycin-binding (InterPro:IPR009076), Armadillo-like helical (InterPro:IPR011989), Protein kinase-like domain (InterPro:IPR011009), PIK-related kinase, FAT (InterPro:IPR003151), PIK-related kinase (InterPro:IPR014009), Armadillo-type fold (InterPro:IPR016024), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), PIK-related kinase, FATC (InterPro:IPR003152); BEST Arabidopsis thaliana protein match is: Ataxia telangiectasia-mutated and RAD3-related (TAIR:AT5G40820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36109 : 1156.0) no description available & (gnl|cdd|34637 : 644.0) no description available & (q5z987|atr_orysa : 178.0) Serine/threonine-protein kinase ATR (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 4338.0) & (original description: Putative mTOR, Description = Serine/threonine-protein kinase mTOR, PFAM = PF00454;PF08771;PF02259)' T '33.30.1' 'development.multitarget.target of rapamycin' 'nbv0.5scaffold87_163557-207143' '(at1g50030 : 3885.0) Related to TOR proteins from yeast and mammals, regulators of cell growth in response to nutrient availability. TOR proteins belong to the family of phosphatidylinositol 3-kinase and are targets of the antiproliferative drug rapamycin. AtTOR binds the yeast FKBP12 protein in the presence of Rapamycin, is involved in embryogenesis and is expressed in embryos, endosperm and meristems.; target of rapamycin (TOR); FUNCTIONS IN: protein binding, 1-phosphatidylinositol-3-kinase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), FKBP12-rapamycin-associated protein, FKBP12-rapamycin-binding (InterPro:IPR009076), Armadillo-like helical (InterPro:IPR011989), Protein kinase-like domain (InterPro:IPR011009), PIK-related kinase, FAT (InterPro:IPR003151), PIK-related kinase (InterPro:IPR014009), Armadillo-type fold (InterPro:IPR016024), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), PIK-related kinase, FATC (InterPro:IPR003152); BEST Arabidopsis thaliana protein match is: Ataxia telangiectasia-mutated and RAD3-related (TAIR:AT5G40820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36109 : 1814.0) no description available & (gnl|cdd|34637 : 837.0) no description available & (q5z987|atr_orysa : 178.0) Serine/threonine-protein kinase ATR (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 7770.0) & (original description: Putative TOR, Description = Serine/threonine-protein kinase TOR, PFAM = PF11865;PF02259;PF02260;PF08771;PF00454)' T '33.30.1' 'development.multitarget.target of rapamycin' 'niben044scf00000298ctg008_3203-18985' '(at1g50030 : 1617.0) Related to TOR proteins from yeast and mammals, regulators of cell growth in response to nutrient availability. TOR proteins belong to the family of phosphatidylinositol 3-kinase and are targets of the antiproliferative drug rapamycin. AtTOR binds the yeast FKBP12 protein in the presence of Rapamycin, is involved in embryogenesis and is expressed in embryos, endosperm and meristems.; target of rapamycin (TOR); FUNCTIONS IN: protein binding, 1-phosphatidylinositol-3-kinase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), FKBP12-rapamycin-associated protein, FKBP12-rapamycin-binding (InterPro:IPR009076), Armadillo-like helical (InterPro:IPR011989), Protein kinase-like domain (InterPro:IPR011009), PIK-related kinase, FAT (InterPro:IPR003151), PIK-related kinase (InterPro:IPR014009), Armadillo-type fold (InterPro:IPR016024), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), PIK-related kinase, FATC (InterPro:IPR003152); BEST Arabidopsis thaliana protein match is: Ataxia telangiectasia-mutated and RAD3-related (TAIR:AT5G40820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36109 : 618.0) no description available & (gnl|cdd|34637 : 188.0) no description available & (reliability: 3234.0) & (original description: Putative TOR, Description = Serine/threonine-protein kinase TOR, PFAM = PF11865)' T '33.30.1' 'development.multitarget.target of rapamycin' 'niben044scf00000298ctg012_146-3039' '(at1g50030 : 195.0) Related to TOR proteins from yeast and mammals, regulators of cell growth in response to nutrient availability. TOR proteins belong to the family of phosphatidylinositol 3-kinase and are targets of the antiproliferative drug rapamycin. AtTOR binds the yeast FKBP12 protein in the presence of Rapamycin, is involved in embryogenesis and is expressed in embryos, endosperm and meristems.; target of rapamycin (TOR); FUNCTIONS IN: protein binding, 1-phosphatidylinositol-3-kinase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), FKBP12-rapamycin-associated protein, FKBP12-rapamycin-binding (InterPro:IPR009076), Armadillo-like helical (InterPro:IPR011989), Protein kinase-like domain (InterPro:IPR011009), PIK-related kinase, FAT (InterPro:IPR003151), PIK-related kinase (InterPro:IPR014009), Armadillo-type fold (InterPro:IPR016024), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), PIK-related kinase, FATC (InterPro:IPR003152); BEST Arabidopsis thaliana protein match is: Ataxia telangiectasia-mutated and RAD3-related (TAIR:AT5G40820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36109 : 83.9) no description available & (reliability: 390.0) & (original description: Putative TOR, Description = Serine/threonine-protein kinase TOR, PFAM = PF02260)' T '33.30.1' 'development.multitarget.target of rapamycin' 'niben101scf00372_463422-501908' '(at1g50030 : 230.0) Related to TOR proteins from yeast and mammals, regulators of cell growth in response to nutrient availability. TOR proteins belong to the family of phosphatidylinositol 3-kinase and are targets of the antiproliferative drug rapamycin. AtTOR binds the yeast FKBP12 protein in the presence of Rapamycin, is involved in embryogenesis and is expressed in embryos, endosperm and meristems.; target of rapamycin (TOR); FUNCTIONS IN: protein binding, 1-phosphatidylinositol-3-kinase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), FKBP12-rapamycin-associated protein, FKBP12-rapamycin-binding (InterPro:IPR009076), Armadillo-like helical (InterPro:IPR011989), Protein kinase-like domain (InterPro:IPR011009), PIK-related kinase, FAT (InterPro:IPR003151), PIK-related kinase (InterPro:IPR014009), Armadillo-type fold (InterPro:IPR016024), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), PIK-related kinase, FATC (InterPro:IPR003152); BEST Arabidopsis thaliana protein match is: Ataxia telangiectasia-mutated and RAD3-related (TAIR:AT5G40820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36108 : 214.0) no description available & (gnl|cdd|34637 : 208.0) no description available & (q5z987|atr_orysa : 166.0) Serine/threonine-protein kinase ATR (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 460.0) & (original description: Putative BnaA07g36310D, Description = BnaA07g36310D protein, PFAM = PF15785;PF02260;PF00454)' T '33.30.1' 'development.multitarget.target of rapamycin' 'niben101scf00953_809803-868203' '(at1g50030 : 3864.0) Related to TOR proteins from yeast and mammals, regulators of cell growth in response to nutrient availability. TOR proteins belong to the family of phosphatidylinositol 3-kinase and are targets of the antiproliferative drug rapamycin. AtTOR binds the yeast FKBP12 protein in the presence of Rapamycin, is involved in embryogenesis and is expressed in embryos, endosperm and meristems.; target of rapamycin (TOR); FUNCTIONS IN: protein binding, 1-phosphatidylinositol-3-kinase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), FKBP12-rapamycin-associated protein, FKBP12-rapamycin-binding (InterPro:IPR009076), Armadillo-like helical (InterPro:IPR011989), Protein kinase-like domain (InterPro:IPR011009), PIK-related kinase, FAT (InterPro:IPR003151), PIK-related kinase (InterPro:IPR014009), Armadillo-type fold (InterPro:IPR016024), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), PIK-related kinase, FATC (InterPro:IPR003152); BEST Arabidopsis thaliana protein match is: Ataxia telangiectasia-mutated and RAD3-related (TAIR:AT5G40820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36109 : 1802.0) no description available & (gnl|cdd|34637 : 830.0) no description available & (q5z987|atr_orysa : 178.0) Serine/threonine-protein kinase ATR (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 7728.0) & (original description: Putative TOR, Description = Serine/threonine-protein kinase TOR, PFAM = PF08771;PF11865;PF02260;PF02259;PF00454)' T '33.30.1' 'development.multitarget.target of rapamycin' 'niben101scf04383_207520-239816' '(at1g50030 : 238.0) Related to TOR proteins from yeast and mammals, regulators of cell growth in response to nutrient availability. TOR proteins belong to the family of phosphatidylinositol 3-kinase and are targets of the antiproliferative drug rapamycin. AtTOR binds the yeast FKBP12 protein in the presence of Rapamycin, is involved in embryogenesis and is expressed in embryos, endosperm and meristems.; target of rapamycin (TOR); FUNCTIONS IN: protein binding, 1-phosphatidylinositol-3-kinase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), FKBP12-rapamycin-associated protein, FKBP12-rapamycin-binding (InterPro:IPR009076), Armadillo-like helical (InterPro:IPR011989), Protein kinase-like domain (InterPro:IPR011009), PIK-related kinase, FAT (InterPro:IPR003151), PIK-related kinase (InterPro:IPR014009), Armadillo-type fold (InterPro:IPR016024), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), PIK-related kinase, FATC (InterPro:IPR003152); BEST Arabidopsis thaliana protein match is: Ataxia telangiectasia-mutated and RAD3-related (TAIR:AT5G40820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36108 : 214.0) no description available & (gnl|cdd|34637 : 207.0) no description available & (q5z987|atr_orysa : 167.0) Serine/threonine-protein kinase ATR (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 476.0) & (original description: Putative BnaA07g36310D, Description = BnaA07g36310D protein, PFAM = PF02985;PF00454;PF02260;PF15785)' T '33.50' 'development.inhibitor proteins' '' '' '33.99' 'development.unspecified' 'nbv0.3scaffold253_126443-131264' '(at4g36920 : 332.0) Encodes a floral homeotic gene, a member of the AP2/EREBP (ethylene responsive element binding protein) class of transcription factors and is involved in the specification of floral organ identity, establishment of floral meristem identity, suppression of floral meristem indeterminancy, and development of the ovule and seed coat. AP2 also has a role in controlling seed mass. Dominant negative allele I28, revealed a function in meristem maintenance-mutant meristems are smaller than normal siblings. AP2 appears to act on the WUS-CLV pathway in an AG independent manner.; APETALA 2 (AP2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 3 (TAIR:AT5G67180.1). & (q8l3u3|bbm1_brana : 142.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 93.0) no description available & (reliability: 664.0) & (original description: Putative lip1, Description = LIPLESS1, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'nbv0.3scaffold372_66887-72075' '(at5g23660 : 242.0) homolog of the Medicago nodulin MTN3; homolog of Medicago truncatula MTN3 (MTN3); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT3G48740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36836 : 225.0) no description available & (gnl|cdd|86234 : 91.3) no description available & (reliability: 484.0) & (original description: Putative N3, Description = Bidirectional sugar transporter N3, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'nbv0.3scaffold565_100238-106511' '(at4g10350 : 362.0) NAC domain protein. SMB, BRN1, and BRN2 act to regulate root cap maturation, in a partially redundant fashion.BRN1 and BRN2, control the cell wall maturation processes that are required to detach root cap layers from the root.; NAC domain containing protein 70 (NAC070); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 15 (TAIR:AT1G33280.1); Has 2970 Blast hits to 2965 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2970; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q5z6b6|nac76_orysa : 246.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (gnl|cdd|66085 : 213.0) no description available & (reliability: 724.0) & (original description: Putative BRN2, Description = Protein BEARSKIN2, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.3scaffold573_109557-113936' '(at3g61790 : 414.0) Protein with RING/U-box and TRAF-like domains; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: multicellular organismal development, ubiquitin-dependent protein catabolic process, protein ubiquitination; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Seven-in-absentia protein, TRAF-like domain (InterPro:IPR018121), Zinc finger, SIAH-type (InterPro:IPR013010), Zinc finger, RING-type (InterPro:IPR001841), Seven In Absentia Homolog-type (InterPro:IPR013323), Seven-in-absentia protein, sina (InterPro:IPR004162), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT4G27880.1); Has 1836 Blast hits to 1817 proteins in 706 species: Archae - 0; Bacteria - 0; Metazoa - 1264; Fungi - 11; Plants - 486; Viruses - 2; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|38212 : 251.0) no description available & (gnl|cdd|86255 : 222.0) no description available & (q8t3y0|sinal_drome : 105.0) Probable E3 ubiquitin-protein ligase sina-like CG13030 (EC 6.3.2.-) - Drosophila melanogaster (Fruit fly) & (reliability: 828.0) & (original description: Putative SINA, Description = E3 ubiquitin-protein ligase, PFAM = PF03145)' T '33.99' 'development.unspecified' 'nbv0.3scaffold804_45286-52373' '(at5g20520 : 513.0) Encodes a Bem46-like protein. WAV2 negatively regulates root bending when roots alter their growth direction. It's not involved in sensing environmental stimuli (e.g. gravity, light, water, touch).; WAVY GROWTH 2 (WAV2); FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: root development; LOCATED IN: organelle inner membrane, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G13610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39592 : 236.0) no description available & (reliability: 1026.0) & (original description: Putative WAV2, Description = Bem46-family protein WAV2, PFAM = PF00326)' T '33.99' 'development.unspecified' 'nbv0.3scaffold1160_30523-42059' '(at3g55770 : 179.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1). & (p29675|sf3_helan : 138.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 135.0) no description available & (reliability: 354.0) & (original description: Putative PLIM2C, Description = LIM domain-containing protein PLIM2c, PFAM = PF00412;PF00412)' T '33.99' 'development.unspecified' 'nbv0.3scaffold1231_64687-72873' '(at2g43500 : 720.0) Plant regulator RWP-RK family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT3G59580.2); Has 665 Blast hits to 521 proteins in 81 species: Archae - 0; Bacteria - 147; Metazoa - 3; Fungi - 2; Plants - 476; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|65798 : 88.2) no description available & (reliability: 1390.0) & (original description: Putative NLP9, Description = Protein NLP9, PFAM = PF02042;PF00564)' T '33.99' 'development.unspecified' 'nbv0.3scaffold1250_58129-64335' '(at2g45190 : 239.0) Encodes a member of the YABBY family of transcriptional regulators that is involved in abaxial cell type specification in leaves and fruits. YAB1 acts in a non-cell autonomous fashion within the meristem to affect phyllotactic patterning. The non-autonomous effect on the central region of the meristem is mediated through the activity if Lateral Suppressor (LAS).; ABNORMAL FLORAL ORGANS (AFO); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT4G00180.1); Has 454 Blast hits to 452 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 436; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|68268 : 202.0) no description available & (q7xim7|yab1_orysa : 132.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 478.0) & (original description: Putative YAB1, Description = Axial regulator YABBY 1, PFAM = PF04690)' T '33.99' 'development.unspecified' 'nbv0.3scaffold1288_1902-17360' '(at5g13570 : 427.0) Encodes DCP2 with mRNA decapping activity. DCP2 forms a mRNA decapping complex with DCP1 (At1g08370) and VCS (VARICOSE) (At3g13300). Recombinant DCP2 is enzymatically active in vitro, generating from capped mRNAs m7GDP, and 5í-phosphorylated mRNAs. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP1.; decapping 2 (DCP2); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Dcp2, box A (InterPro:IPR007722), NUDIX hydrolase domain (InterPro:IPR000086). & (gnl|cdd|38148 : 267.0) no description available & (gnl|cdd|72892 : 204.0) no description available & (reliability: 854.0) & (original description: Putative DCP2, Description = mRNA-decapping enzyme 2, PFAM = PF05026;PF00293)' T '33.99' 'development.unspecified' 'nbv0.3scaffold1547_34293-39286' '(at1g75500 : 192.0) An Arabidopsis thaliana homolog of Medicago truncatula NODULIN21 (MtN21). The gene encodes a plant-specific, predicted integral membrane protein and is a member of the Plant-Drug/Metabolite Exporter (P-DME) family (Transporter Classification number: TC 2.A.7.3).; Walls Are Thin 1 (WAT1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT3G53210.1). & (reliability: 384.0) & (original description: Putative WAT1, Description = WAT1-related protein, PFAM = PF00892)' T '33.99' 'development.unspecified' 'nbv0.3scaffold2076_71193-77560' '(at4g08300 : 414.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G44800.1); Has 3616 Blast hits to 3605 proteins in 598 species: Archae - 32; Bacteria - 1860; Metazoa - 4; Fungi - 2; Plants - 1222; Viruses - 0; Other Eukaryotes - 496 (source: NCBI BLink). & (reliability: 828.0) & (original description: Putative NLP, Description = WAT1-related protein, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'nbv0.3scaffold2245_68761-73901' '(at3g13960 : 166.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 5 (GRF5); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 2351 Blast hits to 1483 proteins in 168 species: Archae - 0; Bacteria - 108; Metazoa - 567; Fungi - 216; Plants - 548; Viruses - 4; Other Eukaryotes - 908 (source: NCBI BLink). & (gnl|cdd|72299 : 83.8) no description available & (reliability: 304.0) & (original description: Putative GRF1, Description = Growth-regulating factor 1, PFAM = PF08879;PF08880)' T '33.99' 'development.unspecified' 'nbv0.3scaffold2269_1858-10169' '(at3g44290 : 248.0) NAC domain containing protein 60 (NAC060); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 89 (TAIR:AT5G22290.1); Has 2819 Blast hits to 2813 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2819; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 185.0) no description available & (q7gcl7|nac74_orysa : 176.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 496.0) & (original description: Putative NTL8, Description = NAC domain-containing protein 40, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.3scaffold2747_13563-22614' '(at4g17890 : 402.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ARF-GAP domain 8 (AGD8); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 9 (TAIR:AT5G46750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35925 : 340.0) no description available & (gnl|cdd|85433 : 141.0) no description available & (reliability: 772.0) & (original description: Putative AGD8, Description = Probable ADP-ribosylation factor GTPase-activating protein AGD8, PFAM = PF01412)' T '33.99' 'development.unspecified' 'nbv0.3scaffold3308_36815-40687' '(at1g12260 : 300.0) Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.; NAC 007 (NAC007); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: Arabidopsis NAC domain containing protein 26 (TAIR:AT1G62700.1); Has 3158 Blast hits to 3153 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 2; Plants - 3027; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (gnl|cdd|66085 : 206.0) no description available & (q5z6b6|nac76_orysa : 182.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (reliability: 600.0) & (original description: Putative NAC007, Description = NAC domain-containing protein 7, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.3scaffold3320_12467-17245' '(at1g21460 : 306.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT5G53190.1); Has 988 Blast hits to 930 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 221; Fungi - 0; Plants - 643; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36836 : 174.0) no description available & (gnl|cdd|86234 : 81.3) no description available & (reliability: 612.0) & (original description: Putative SWEET1, Description = Bidirectional sugar transporter SWEET1, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'nbv0.3scaffold3325_60734-67860' '(at3g49660 : 473.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: G-protein coupled receptor protein signaling pathway; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 118516 Blast hits to 43755 proteins in 1024 species: Archae - 92; Bacteria - 12360; Metazoa - 47439; Fungi - 25856; Plants - 15887; Viruses - 9; Other Eukaryotes - 16873 (source: NCBI BLink). & (gnl|cdd|35487 : 299.0) no description available & (gnl|cdd|29257 : 269.0) no description available & (p93107|pf20_chlre : 127.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 946.0) & (original description: Putative WDR5A, Description = COMPASS-like H3K4 histone methylase component WDR5A, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'nbv0.3scaffold3488_64738-74259' '(at5g22380 : 223.0) NAC domain containing protein 90 (NAC090); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 61 (TAIR:AT3G44350.2); Has 2731 Blast hits to 2726 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2731; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 143.0) no description available & (q53nf7|nac71_orysa : 113.0) NAC domain-containing protein 71 (ONAC071) - Oryza sativa (Rice) & (reliability: 446.0) & (original description: Putative NAC090, Description = NAC domain-containing protein 90, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.3scaffold3533_30487-35778' '(at1g76420 : 293.0) Identified in an enhancer trap line; member of the NAC family of proteins. Expressed at the boundary between the shoot meristem and lateral organs and the polar nuclei in the embryo sac.; CUP SHAPED COTYLEDON3 (CUC3); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 38 (TAIR:AT2G24430.2); Has 3010 Blast hits to 3003 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3005; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66085 : 210.0) no description available & (q5cd17|nac77_orysa : 208.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 586.0) & (original description: Putative CUC3, Description = CUP-SHAPED COTYLEDON3, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.3scaffold4027_51197-54997' '(at5g18270 : 275.0) Arabidopsis NAC domain containing protein 87 (ANAC087); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 46 (TAIR:AT3G04060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5cd17|nac77_orysa : 236.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (gnl|cdd|66085 : 212.0) no description available & (reliability: 550.0) & (original description: Putative NH17, Description = Nam-like protein 17, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.3scaffold4098_1-3499' '(at2g46770 : 325.0) NAC transcription factor NST1. NST1 and NST2 are redundant in regulating secondary wall thickening in anther walls and siliques. NST1 promoter was detected in various tissues in which lignified secondary walls develop.; EMBRYO DEFECTIVE 2301 (EMB2301); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain protein 66 (TAIR:AT3G61910.1); Has 2975 Blast hits to 2968 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 2973; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q5z6b6|nac76_orysa : 238.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (gnl|cdd|66085 : 210.0) no description available & (reliability: 650.0) & (original description: Putative NAC043, Description = NAC domain-containing protein 43, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.3scaffold4128_20292-23809' '(q5ne24|nsp2_medtr : 561.0) Nodulation signaling pathway 2 protein - Medicago truncatula (Barrel medic) & (at4g08250 : 441.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2377 Blast hits to 2344 proteins in 299 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2375; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 277.0) no description available & (reliability: 882.0) & (original description: Putative NSP2, Description = Nodulation-signaling pathway 2 protein, PFAM = PF03514)' T '33.99' 'development.unspecified' 'nbv0.3scaffold4589_31715-36824' '(at2g28550 : 255.0) related to AP2.7 (RAP2.7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 (TAIR:AT5G60120.1). & (q8l3u3|bbm1_brana : 127.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 90.3) no description available & (reliability: 468.0) & (original description: Putative ids1, Description = APETALA2-like protein, PFAM = PF00847)' T '33.99' 'development.unspecified' 'nbv0.3scaffold4634_58859-67669' '(at5g08560 : 669.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT5G43920.1); Has 58921 Blast hits to 28907 proteins in 822 species: Archae - 84; Bacteria - 8409; Metazoa - 23216; Fungi - 12597; Plants - 7341; Viruses - 6; Other Eukaryotes - 7268 (source: NCBI BLink). & (gnl|cdd|35514 : 597.0) no description available & (gnl|cdd|29257 : 169.0) no description available & (reliability: 1338.0) & (original description: Putative WDR26, Description = WD repeat-containing protein 26, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'nbv0.3scaffold4702_1-3732' '(at4g37790 : 174.0) Encodes homeobox protein HAT22, member of the HD-Zip II family.; HAT22; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, response to cytokinin stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein family (TAIR:AT2G22800.1); Has 6652 Blast hits to 6630 proteins in 455 species: Archae - 0; Bacteria - 0; Metazoa - 4237; Fungi - 277; Plants - 2018; Viruses - 3; Other Eukaryotes - 117 (source: NCBI BLink). & (gnl|cdd|35704 : 118.0) no description available & (reliability: 348.0) & (original description: Putative HAT2, Description = Homeobox associated leucine zipper protein, PFAM = PF00046;PF02183)' T '33.99' 'development.unspecified' 'nbv0.3scaffold4807_47439-68128' '(at3g48740 : 259.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: homolog of Medicago truncatula MTN3 (TAIR:AT5G23660.1); Has 1006 Blast hits to 953 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 236; Fungi - 0; Plants - 627; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|36836 : 223.0) no description available & (gnl|cdd|86234 : 89.4) no description available & (reliability: 518.0) & (original description: Putative SWEET12, Description = Bidirectional sugar transporter SWEET12, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'nbv0.3scaffold4807_64532-68173' '(at3g48740 : 265.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: homolog of Medicago truncatula MTN3 (TAIR:AT5G23660.1); Has 1006 Blast hits to 953 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 236; Fungi - 0; Plants - 627; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|36836 : 229.0) no description available & (gnl|cdd|86234 : 92.1) no description available & (reliability: 530.0) & (original description: Putative SWEET10, Description = Bidirectional sugar transporter SWEET10, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'nbv0.3scaffold5114_36282-44656' '(at5g08560 : 710.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT5G43920.1); Has 58921 Blast hits to 28907 proteins in 822 species: Archae - 84; Bacteria - 8409; Metazoa - 23216; Fungi - 12597; Plants - 7341; Viruses - 6; Other Eukaryotes - 7268 (source: NCBI BLink). & (gnl|cdd|35514 : 606.0) no description available & (gnl|cdd|29257 : 162.0) no description available & (reliability: 1420.0) & (original description: Putative wdr26, Description = WD repeat-containing protein 26, PFAM = PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'nbv0.3scaffold5324_3279-7510' '(at1g07530 : 639.0) Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm.; SCARECROW-like 14 (SCL14); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G29060.1); Has 2535 Blast hits to 2449 proteins in 301 species: Archae - 0; Bacteria - 12; Metazoa - 27; Fungi - 4; Plants - 2483; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|67150 : 351.0) no description available & (q69vg1|cigr1_orysa : 241.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (reliability: 1198.0) & (original description: Putative SCL9, Description = Scarecrow-like protein 9, PFAM = PF03514)' T '33.99' 'development.unspecified' 'nbv0.3scaffold5540_31960-38191' '(at5g57390 : 350.0) Encodes a member of the AP2 family of transcriptional regulators.May be involved in germination and seedling growth. Mutants are resistant to ABA analogs and are resistant to high nitrogen concentrations.essential for the developmental transition between the embryonic and vegetative phases in plants.Overexpression results in the formation of somatic embryos on cotyledons.; AINTEGUMENTA-like 5 (AIL5); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G20840.1); Has 9099 Blast hits to 5771 proteins in 325 species: Archae - 0; Bacteria - 38; Metazoa - 238; Fungi - 101; Plants - 7378; Viruses - 6; Other Eukaryotes - 1338 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 317.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 92.2) no description available & (reliability: 700.0) & (original description: Putative AIL1, Description = AP2-like ethylene-responsive transcription factor, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'nbv0.3scaffold5960_49236-61566' '(at3g24560 : 302.0) novel gene involved in embryogenesis; RASPBERRY 3 (RSY3); CONTAINS InterPro DOMAIN/s: PP-loop (InterPro:IPR011063); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85285 : 142.0) no description available & (reliability: 604.0) & (original description: Putative Os02g0266500, Description = Os02g0266500 protein, PFAM = PF01171)' T '33.99' 'development.unspecified' 'nbv0.3scaffold6018_50772-54296' '(at5g55940 : 181.0) embryo defective 2731 (emb2731); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0172 (InterPro:IPR005366); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0172) (TAIR:AT5G51620.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67291 : 175.0) no description available & (gnl|cdd|38499 : 168.0) no description available & (reliability: 362.0) & (original description: Putative EMB2731, Description = Protein EMBRYO DEFECTIVE 2731, PFAM = PF03665)' T '33.99' 'development.unspecified' 'nbv0.3scaffold6337_32750-36864' '(at5g06710 : 192.0) Homeobox-leucine zipper protein.; homeobox from Arabidopsis thaliana (HAT14); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT4G17460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35704 : 140.0) no description available & (gnl|cdd|47667 : 85.0) no description available & (reliability: 384.0) & (original description: Putative HAT14, Description = Homeobox-leucine zipper protein HAT14, PFAM = PF02183;PF00046)' T '33.99' 'development.unspecified' 'nbv0.3scaffold6343_51261-54576' '(at3g51280 : 503.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G48850.1); Has 898 Blast hits to 725 proteins in 125 species: Archae - 8; Bacteria - 246; Metazoa - 0; Fungi - 4; Plants - 180; Viruses - 0; Other Eukaryotes - 460 (source: NCBI BLink). & (reliability: 1006.0) & (original description: Putative At3g51280, Description = Protein POLLENLESS 3-LIKE 2, PFAM = PF00515)' T '33.99' 'development.unspecified' 'nbv0.3scaffold6398_24173-28487' '(at5g14450 : 349.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G26430.1); Has 3217 Blast hits to 3179 proteins in 111 species: Archae - 0; Bacteria - 82; Metazoa - 0; Fungi - 14; Plants - 3119; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (q7y1x1|est_hevbr : 296.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (gnl|cdd|58514 : 286.0) no description available & (reliability: 694.0) & (original description: Putative ache, Description = Acetylcholinesterase, PFAM = PF00657)' T '33.99' 'development.unspecified' 'nbv0.3scaffold6531_48332-59390' '(at5g12130 : 410.0) PIGMENT DEFECTIVE 149 (PDE149); CONTAINS InterPro DOMAIN/s: Integral membrane protein TerC (InterPro:IPR005496), Integral membrane protein TerC, riboswitch-linked (InterPro:IPR022369); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31202 : 143.0) no description available & (reliability: 820.0) & (original description: Putative TERC, Description = Thylakoid membrane protein TERC, chloroplastic, PFAM = PF03741)' T '33.99' 'development.unspecified' 'nbv0.3scaffold6571_33374-42995' '(at3g09090 : 1118.0) Encodes DEX1 (defective in exine formation). Required for exine pattern formation during pollen development.; DEFECTIVE IN EXINE FORMATION 1 (DEX1); CONTAINS InterPro DOMAIN/s: FG-GAP (InterPro:IPR013517). & (reliability: 2236.0) & (original description: Putative DEX1, Description = Protein DEFECTIVE IN EXINE FORMATION 1, PFAM = PF13517)' T '33.99' 'development.unspecified' 'nbv0.3scaffold6615_47347-51455' '(at5g64530 : 124.0) xylem NAC domain 1 (XND1); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 25 (TAIR:AT1G61110.1); Has 2741 Blast hits to 2738 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2741; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 102.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 95.3) no description available & (reliability: 248.0) & (original description: Putative NAC8, Description = NAC transcription factor, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.3scaffold6681_17245-22353' '(at3g28050 : 218.0) nodulin MtN21 /EamA-like transporter family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G40240.1); Has 1917 Blast hits to 1909 proteins in 293 species: Archae - 12; Bacteria - 576; Metazoa - 4; Fungi - 10; Plants - 1200; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative At5g40210, Description = WAT1-related protein At5g40210, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'nbv0.3scaffold7216_46788-56841' '(at1g13120 : 207.0) embryo defective 1745 (emb1745); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nuclear pore; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GLE1-like (InterPro:IPR012476); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05523.1); Has 36705 Blast hits to 24548 proteins in 2114 species: Archae - 242; Bacteria - 8583; Metazoa - 12421; Fungi - 3107; Plants - 1525; Viruses - 221; Other Eukaryotes - 10606 (source: NCBI BLink). & (gnl|cdd|87377 : 158.0) no description available & (gnl|cdd|37623 : 144.0) no description available & (reliability: 414.0) & (original description: Putative Os02g0596100, Description = Nucleoporin GLE1, PFAM = PF07817)' T '33.99' 'development.unspecified' 'nbv0.3scaffold7399_25968-31149' '(q03416|glob_tobac : 303.0) Floral homeotic protein GLOBOSA - Nicotiana tabacum (Common tobacco) & (at5g20240 : 166.0) Floral homeotic gene encoding a MADS domain transcription factor. Required for the specification of petal and stamen identities.; PISTILLATA (PI); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G23260.1); Has 7000 Blast hits to 6999 proteins in 918 species: Archae - 0; Bacteria - 3; Metazoa - 620; Fungi - 300; Plants - 6000; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|29020 : 121.0) no description available & (reliability: 332.0) & (original description: Putative GLO, Description = Floral homeotic protein GLOBOSA, PFAM = PF00319)' T '33.99' 'development.unspecified' 'nbv0.3scaffold7617_14372-29756' '(at2g02560 : 1634.0) Arabidopsis thaliana homolog of human CAND1 (cullin-associated and neddylation-dissociated). Putative similarity to TBP-interacting protein TIP120. Ubiquitously expressed in plant tissues throughout development. T-DNA insertion mutant plants were completely sterile and resistant to sirtinol and auxin, but not to gibberellins or brassinolide. Displayed developmental phenotypes similar to those of axr1, namely, short petioles, downwardly curling leaves, shorter inflorescence. Required for SCF function and appears to modulate SCF complex cycling. Physically interacts with CUL1.; cullin-associated and neddylation dissociated (CAND1); FUNCTIONS IN: binding; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, vegetative to reproductive phase transition of meristem; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), TATA-binding protein interacting (TIP20) (InterPro:IPR013932); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37035 : 1018.0) no description available & (gnl|cdd|72048 : 203.0) no description available & (reliability: 3268.0) & (original description: Putative CAND1, Description = Cullin-associated NEDD8-dissociated protein 1, PFAM = PF08623)' T '33.99' 'development.unspecified' 'nbv0.3scaffold7715_51969-55398' '(at3g48740 : 197.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: homolog of Medicago truncatula MTN3 (TAIR:AT5G23660.1); Has 1006 Blast hits to 953 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 236; Fungi - 0; Plants - 627; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|36836 : 193.0) no description available & (gnl|cdd|86234 : 82.1) no description available & (reliability: 394.0) & (original description: Putative NEC1, Description = Bidirectional sugar transporter NEC1, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'nbv0.3scaffold7919_14097-22620' '(at5g52820 : 802.0) WD-40 repeat family protein / notchless protein, putative; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), NLE (InterPro:IPR012972), WD40 repeat (InterPro:IPR001680), G-protein, beta subunit (InterPro:IPR001632), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35492 : 722.0) no description available & (gnl|cdd|29257 : 244.0) no description available & (p93107|pf20_chlre : 100.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1604.0) & (original description: Putative NLE1, Description = Notchless protein homolog, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF08154)' T '33.99' 'development.unspecified' 'nbv0.3scaffold8202_1-11271' '(at4g15920 : 202.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT3G16690.1); Has 980 Blast hits to 942 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 205; Fungi - 0; Plants - 645; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (gnl|cdd|36836 : 183.0) no description available & (reliability: 404.0) & (original description: Putative SWEET17, Description = Bidirectional sugar transporter SWEET17, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'nbv0.3scaffold10058_1184-11518' '(at4g03240 : 130.0) Encodes AtFH, a frataxin homolog. Frataxin is required for the biogenesis of mitochondria in different organisms. AtFH knock-out mutants are lethal. Required for full activity of mitochondrial Fe-S proteins. Deficiency of AtFH induces oxidative stress.; frataxin homolog (FH); CONTAINS InterPro DOMAIN/s: Frataxin (InterPro:IPR017789), Frataxin conserved site (InterPro:IPR020895), Frataxin-like (InterPro:IPR002908); Has 1148 Blast hits to 1148 proteins in 551 species: Archae - 0; Bacteria - 783; Metazoa - 128; Fungi - 127; Plants - 48; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|38623 : 98.1) no description available & (gnl|cdd|29607 : 85.3) no description available & (reliability: 260.0) & (original description: Putative FH, Description = Frataxin, mitochondrial, PFAM = PF01491)' T '33.99' 'development.unspecified' 'nbv0.3scaffold10065_5369-10427' '(gnl|cdd|68610 : 203.0) no description available & (at1g70670 : 191.0) Caleosin-related family protein; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: Caleosin-related family protein (TAIR:AT1G70680.1); Has 341 Blast hits to 336 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 60; Plants - 278; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative ATS1, Description = Caleosin, PFAM = PF05042)' T '33.99' 'development.unspecified' 'nbv0.3scaffold10295_39263-46653' '(at4g27880 : 528.0) Protein with RING/U-box and TRAF-like domains; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: multicellular organismal development, protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Seven-in-absentia protein, TRAF-like domain (InterPro:IPR018121), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, SIAH-type (InterPro:IPR013010), Seven In Absentia Homolog-type (InterPro:IPR013323), Seven-in-absentia protein, sina (InterPro:IPR004162), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT3G61790.1); Has 1768 Blast hits to 1750 proteins in 698 species: Archae - 0; Bacteria - 0; Metazoa - 1225; Fungi - 9; Plants - 484; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|38212 : 310.0) no description available & (gnl|cdd|86255 : 272.0) no description available & (q8t3y0|sinal_drome : 140.0) Probable E3 ubiquitin-protein ligase sina-like CG13030 (EC 6.3.2.-) - Drosophila melanogaster (Fruit fly) & (reliability: 1056.0) & (original description: Putative SINAT4, Description = E3 ubiquitin-protein ligase SINAT4, PFAM = PF03145)' T '33.99' 'development.unspecified' 'nbv0.3scaffold10297_17723-23895' '(at5g57390 : 361.0) Encodes a member of the AP2 family of transcriptional regulators.May be involved in germination and seedling growth. Mutants are resistant to ABA analogs and are resistant to high nitrogen concentrations.essential for the developmental transition between the embryonic and vegetative phases in plants.Overexpression results in the formation of somatic embryos on cotyledons.; AINTEGUMENTA-like 5 (AIL5); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G20840.1); Has 9099 Blast hits to 5771 proteins in 325 species: Archae - 0; Bacteria - 38; Metazoa - 238; Fungi - 101; Plants - 7378; Viruses - 6; Other Eukaryotes - 1338 (source: NCBI BLink). & (q8lsn2|bbm2_brana : 327.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (gnl|cdd|47695 : 94.2) no description available & (reliability: 722.0) & (original description: Putative Os04g0653600, Description = Os04g0653600 protein, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'nbv0.3scaffold10414_37842-45695' '(at3g61790 : 537.0) Protein with RING/U-box and TRAF-like domains; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: multicellular organismal development, ubiquitin-dependent protein catabolic process, protein ubiquitination; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Seven-in-absentia protein, TRAF-like domain (InterPro:IPR018121), Zinc finger, SIAH-type (InterPro:IPR013010), Zinc finger, RING-type (InterPro:IPR001841), Seven In Absentia Homolog-type (InterPro:IPR013323), Seven-in-absentia protein, sina (InterPro:IPR004162), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT4G27880.1); Has 1836 Blast hits to 1817 proteins in 706 species: Archae - 0; Bacteria - 0; Metazoa - 1264; Fungi - 11; Plants - 486; Viruses - 2; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|38212 : 314.0) no description available & (gnl|cdd|86255 : 274.0) no description available & (q8t3y0|sinal_drome : 139.0) Probable E3 ubiquitin-protein ligase sina-like CG13030 (EC 6.3.2.-) - Drosophila melanogaster (Fruit fly) & (reliability: 1074.0) & (original description: Putative SINAT5, Description = E3 ubiquitin-protein ligase SINAT5, PFAM = PF03145)' T '33.99' 'development.unspecified' 'nbv0.3scaffold10636_24088-32994' '(at1g48410 : 1507.0) Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus.; ARGONAUTE 1 (AGO1); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT5G43810.2). & (gnl|cdd|36259 : 860.0) no description available & (gnl|cdd|72942 : 567.0) no description available & (reliability: 3014.0) & (original description: Putative AGO1, Description = Protein argonaute 1, PFAM = PF16488;PF16486;PF16487;PF02170;PF08699;PF02171;PF12764)' T '33.99' 'development.unspecified' 'nbv0.3scaffold11240_22509-25573' '(at2g22800 : 231.0) Encodes homeobox protein HAT9.; HAT9; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein family (TAIR:AT4G37790.1); Has 6755 Blast hits to 6732 proteins in 464 species: Archae - 0; Bacteria - 0; Metazoa - 4333; Fungi - 266; Plants - 2037; Viruses - 7; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|35704 : 127.0) no description available & (reliability: 460.0) & (original description: Putative HAT22, Description = Homeobox-leucine zipper protein HAT22, PFAM = PF00046;PF02183)' T '33.99' 'development.unspecified' 'nbv0.3scaffold11413_11833-14766' '(at3g55770 : 164.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1). & (p29675|sf3_helan : 109.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 100.0) no description available & (reliability: 324.0) & (original description: Putative BLIM2a, Description = LIM domain protein BLIM2a, PFAM = PF00412)' T '33.99' 'development.unspecified' 'nbv0.3scaffold11958_2633-13417' '(at4g19185 : 486.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G45370.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 896.0) & (original description: Putative At4g19185, Description = WAT1-related protein At4g19185, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'nbv0.3scaffold12078_2576-8978' '(at3g21060 : 729.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 5627 Blast hits to 3991 proteins in 353 species: Archae - 10; Bacteria - 1286; Metazoa - 1502; Fungi - 1496; Plants - 488; Viruses - 0; Other Eukaryotes - 845 (source: NCBI BLink). & (gnl|cdd|36487 : 321.0) no description available & (gnl|cdd|29257 : 98.5) no description available & (reliability: 1458.0) & (original description: Putative RBL, Description = Protein RBL, PFAM = PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'nbv0.3scaffold12672_308-4680' '(at3g56640 : 1092.0) Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.; exocyst complex component sec15A (SEC15A); CONTAINS InterPro DOMAIN/s: Exocyst complex subunit Sec15-like (InterPro:IPR007225); BEST Arabidopsis thaliana protein match is: exocyst complex component sec15B (TAIR:AT4G02350.1); Has 442 Blast hits to 436 proteins in 182 species: Archae - 3; Bacteria - 0; Metazoa - 174; Fungi - 134; Plants - 89; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|37387 : 729.0) no description available & (gnl|cdd|67697 : 113.0) no description available & (reliability: 2184.0) & (original description: Putative SEC15A, Description = Exocyst complex component SEC15A, PFAM = PF04091)' T '33.99' 'development.unspecified' 'nbv0.3scaffold12765_16613-20859' '(at1g07530 : 650.0) Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm.; SCARECROW-like 14 (SCL14); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G29060.1); Has 2535 Blast hits to 2449 proteins in 301 species: Archae - 0; Bacteria - 12; Metazoa - 27; Fungi - 4; Plants - 2483; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|67150 : 337.0) no description available & (q69vg1|cigr1_orysa : 221.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (reliability: 1240.0) & (original description: Putative SCL14, Description = Scarecrow-like protein 14, PFAM = PF03514)' T '33.99' 'development.unspecified' 'nbv0.3scaffold12963_6817-15795' '(at2g43000 : 250.0) NAC domain containing protein 42 (NAC042); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT3G12910.1); Has 2932 Blast hits to 2927 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2932; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 181.0) no description available & (q52qh4|nac68_orysa : 167.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 500.0) & (original description: Putative JUB1, Description = Transcription factor JUNGBRUNNEN 1, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.3scaffold13250_1949-12019' '(at1g02090 : 342.0) encodes a phosphoprotein that is a subunit of the COP9 signalosome. Mutants exhibit constitutive photomorphogenic phenotype.; FUSCA 5 (FUS5); CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38460 : 289.0) no description available & (reliability: 684.0) & (original description: Putative CSN7, Description = COP9 signalosome complex subunit 7, PFAM = PF01399)' T '33.99' 'development.unspecified' 'nbv0.3scaffold13337_4914-14149' '(at5g43920 : 632.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT5G08560.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35514 : 541.0) no description available & (gnl|cdd|29257 : 143.0) no description available & (reliability: 1264.0) & (original description: Putative WDS, Description = Transducin/WD40 domain-containing protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'nbv0.3scaffold13351_21927-25456' '(at2g19580 : 286.0) Member of TETRASPANIN family; tetraspanin2 (TET2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: Tetraspanin family protein (TAIR:AT5G46700.1); Has 515 Blast hits to 513 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 84; Fungi - 0; Plants - 420; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 572.0) & (original description: Putative TET2, Description = Tetraspanin-2, PFAM = PF00335)' T '33.99' 'development.unspecified' 'nbv0.3scaffold13496_37687-42546' '(at5g20700 : 92.4) Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT1G74940.1); Has 476 Blast hits to 476 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 476; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative dl4870c, Description = BnaC01g10250D protein, PFAM = PF04570)' T '33.99' 'development.unspecified' 'nbv0.3scaffold14034_6207-22255' '(at5g65060 : 124.0) MADS domain protein - flowering regulator that is closely related to FLC; MADS AFFECTING FLOWERING 3 (MAF3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: negative regulation of flower development, regulation of transcription, DNA-dependent, vernalization response; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 31 (TAIR:AT5G65050.3); Has 6499 Blast hits to 6487 proteins in 808 species: Archae - 0; Bacteria - 0; Metazoa - 619; Fungi - 301; Plants - 5512; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (q6eu39|mads6_orysa : 123.0) MADS-box transcription factor 6 (OsMADS6) - Oryza sativa (Rice) & (gnl|cdd|29020 : 110.0) no description available & (reliability: 224.0) & (original description: Putative C11, Description = FLC, PFAM = PF01486;PF00319)' T '33.99' 'development.unspecified' 'nbv0.3scaffold14528_5024-12333' '(at3g57390 : 153.0) encodes a MADS-box containing protein likely to be a transcription factor that is expressed in endosperm and developing gametophytes. The protein sequence is most similar to that of AGL15, which is expressed in developing embryos.; AGAMOUS-like 18 (AGL18); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 15 (TAIR:AT5G13790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q39295|agl15_brana : 151.0) Agamous-like MADS-box protein AGL15 - Brassica napus (Rape) & (gnl|cdd|29020 : 126.0) no description available & (gnl|cdd|35238 : 84.3) no description available & (reliability: 300.0) & (original description: Putative MADS9, Description = MADS9, PFAM = PF00319;PF01486)' T '33.99' 'development.unspecified' 'nbv0.3scaffold14721_9188-23430' '(at4g32551 : 811.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (gnl|cdd|35487 : 208.0) no description available & (gnl|cdd|29257 : 206.0) no description available & (reliability: 1622.0) & (original description: Putative Os01g0607600, Description = Os01g0607600 protein, PFAM = PF08513;PF00400;PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'nbv0.3scaffold14930_27696-32743' '(gnl|cdd|66085 : 89.9) no description available & (at1g69490 : 89.7) Encodes a member of the NAC transcription factor gene family. It is expressed in floral primordia and upregulated by AP3 and PI. Its expression is associated with leaf senescence.; NAC-like, activated by AP3/PI (NAP); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 25 (TAIR:AT1G61110.1); Has 3046 Blast hits to 3040 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3046; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative , Description = , PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.3scaffold15501_15838-23427' '(at1g65480 : 263.0) FT, together with LFY, promotes flowering and is antagonistic with its homologous gene, TERMINAL FLOWER1 (TFL1). FT is expressed in leaves and is induced by long day treatment. Either the FT mRNA or protein is translocated to the shoot apex where it induces its own expression. Recent data suggests that FT protein acts as a long-range signal. FT is a target of CO and acts upstream of SOC1.; FLOWERING LOCUS T (FT); FUNCTIONS IN: phosphatidylethanolamine binding, protein binding; INVOLVED IN: photoperiodism, flowering, positive regulation of flower development, regulation of flower development; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); BEST Arabidopsis thaliana protein match is: PEBP (phosphatidylethanolamine-binding protein) family protein (TAIR:AT4G20370.1); Has 2182 Blast hits to 2182 proteins in 306 species: Archae - 0; Bacteria - 0; Metazoa - 594; Fungi - 140; Plants - 1404; Viruses - 3; Other Eukaryotes - 41 (source: NCBI BLink). & (q9xh43|cet2_tobac : 203.0) CEN-like protein 2 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|38556 : 191.0) no description available & (gnl|cdd|29585 : 176.0) no description available & (reliability: 526.0) & (original description: Putative FT, Description = Protein FLOWERING LOCUS T, PFAM = PF01161)' T '33.99' 'development.unspecified' 'nbv0.3scaffold15854_12382-17970' '(at1g69440 : 1219.0) Encodes ARGONAUTE7, a member of the ARGONAUTE family, characterised by the presence of PAZ and PIWI domains. Involved in the regulation of developmental timing. Required for the accumulation of TAS3 ta-siRNAs but not for accumulation of miR171, miR173, miR390 or mi391. Localized in mature rosette leaves and floral buds.; ARGONAUTE7 (AGO7); FUNCTIONS IN: nucleic acid binding; INVOLVED IN: production of ta-siRNAs involved in RNA interference, vegetative phase change, production of lsiRNA involved in RNA interference, regulation of development, heterochronic, gene silencing by miRNA; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT1G48410.1); Has 2067 Blast hits to 2008 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 1082; Fungi - 299; Plants - 502; Viruses - 5; Other Eukaryotes - 179 (source: NCBI BLink). & (gnl|cdd|36259 : 665.0) no description available & (gnl|cdd|72942 : 503.0) no description available & (reliability: 2438.0) & (original description: Putative AGO7, Description = Protein argonaute 7, PFAM = PF02170;PF08699;PF02171;PF16486)' T '33.99' 'development.unspecified' 'nbv0.3scaffold15970_27724-32503' '(at4g32551 : 82.8) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (reliability: 165.6) & (original description: Putative , Description = , PFAM = PF08513)' T '33.99' 'development.unspecified' 'nbv0.3scaffold16102_19990-32123' '(at3g13300 : 1199.0) Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development.; VARICOSE (VCS); FUNCTIONS IN: protein homodimerization activity, nucleotide binding; INVOLVED IN: mRNA catabolic process, deadenylation-independent decapping of nuclear-transcribed mRNA, leaf morphogenesis; LOCATED IN: cytosol, nucleus, cytoplasmic mRNA processing body; EXPRESSED IN: whole plant, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: varicose-related (TAIR:AT3G13290.1); Has 885 Blast hits to 799 proteins in 264 species: Archae - 2; Bacteria - 218; Metazoa - 230; Fungi - 185; Plants - 114; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|37127 : 833.0) no description available & (reliability: 2398.0) & (original description: Putative EDC4, Description = Enhancer of mRNA-decapping protein 4, PFAM = PF16529)' T '33.99' 'development.unspecified' 'nbv0.3scaffold16156_22500-26229' '(at5g50790 : 253.0) Nodulin MtN3 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT5G50800.1); Has 1004 Blast hits to 983 proteins in 128 species: Archae - 0; Bacteria - 22; Metazoa - 208; Fungi - 0; Plants - 622; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (gnl|cdd|36836 : 228.0) no description available & (gnl|cdd|86234 : 90.6) no description available & (reliability: 506.0) & (original description: Putative SWEET14, Description = Bidirectional sugar transporter SWEET14, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'nbv0.3scaffold16712_1-7017' '(at3g52190 : 434.0) Encodes a plant specific protein structurally related to the SEC12 proteins of the early secretory pathway. Mutation of PHF1 impairs Pi transport. Expression was detected in all tissues, and was induced by Pi starvation. Localized in endoplasmic reticulum (ER), and mutation of PHF1 resulted in ER retention and reduced accumulation of the plasma membrane PHT1;1 transporter.; phosphate transporter traffic facilitator1 (PHF1); FUNCTIONS IN: nucleotide binding; INVOLVED IN: cellular response to phosphate starvation, ER to Golgi vesicle-mediated transport, phosphate transport; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G50550.1); Has 6481 Blast hits to 4280 proteins in 402 species: Archae - 34; Bacteria - 2283; Metazoa - 1521; Fungi - 1505; Plants - 384; Viruses - 0; Other Eukaryotes - 754 (source: NCBI BLink). & (gnl|cdd|35990 : 244.0) no description available & (reliability: 868.0) & (original description: Putative PHF1, Description = SEC12-like protein 1, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'nbv0.3scaffold16785_34198-37294' '(at1g69490 : 237.0) Encodes a member of the NAC transcription factor gene family. It is expressed in floral primordia and upregulated by AP3 and PI. Its expression is associated with leaf senescence.; NAC-like, activated by AP3/PI (NAP); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 25 (TAIR:AT1G61110.1); Has 3046 Blast hits to 3040 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3046; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 184.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 155.0) no description available & (reliability: 474.0) & (original description: Putative NAC2, Description = NAC domain protein NAC2, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.3scaffold18406_17230-20979' '(at1g16060 : 164.0) Encodes ADAP, an AP2-domain protein that interacts with ARIA. ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth.; ARIA-interacting double AP2 domain protein (ADAP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G79700.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8lsn2|bbm2_brana : 134.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (reliability: 304.0) & (original description: Putative ADAP, Description = AP2-like ethylene-responsive transcription factor, PFAM = PF00847)' T '33.99' 'development.unspecified' 'nbv0.3scaffold19633_14576-21633' '(at5g56280 : 471.0) one of two genes encoding subunit 6 of COP9 signalosome complex. Protein contains a MPR1p and PAD1p N-terminal (MPN) domain at the N-terminal region and belongs to the Mov34 superfamily. Mutant and antisense expression result in a number of developmental defects and in ubiquitin/proteasome-mediated protein degradation.; COP9 signalosome subunit 6A (CSN6A); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: COP9 signalosome subunit 6B (TAIR:AT4G26430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38260 : 394.0) no description available & (reliability: 942.0) & (original description: Putative CSN6A, Description = COP9 signalosome complex subunit 6a, PFAM = PF13012;PF01398)' T '33.99' 'development.unspecified' 'nbv0.3scaffold19776_1-2952' '(at5g04410 : 84.0) NAC family member, functions as a transcriptional activator, regulates flavonoid biosynthesis under high light.; NAC domain containing protein 2 (NAC2); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 53 (TAIR:AT3G10500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66085 : 83.8) no description available & (reliability: 168.0) & (original description: Putative PGSC0003DMG400008178, Description = , PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.3scaffold20196_5435-10903' '(at3g54220 : 622.0) Encodes a member of a novel family having similarity to DNA binding proteins containing basic-leucine zipper regions; scr is expressed in cortex/endodermal initial cells and in the endodermal cell lineage. Regulates the radial organization of the root. Is required cell-autonomously for distal specification of the quiescent center, which in turn regulates stem cell fate of immediately surrounding cells. SCR appears to be a direct target of SHR.; SCARECROW (SCR); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G41920.1); Has 4362 Blast hits to 4213 proteins in 491 species: Archae - 0; Bacteria - 22; Metazoa - 838; Fungi - 368; Plants - 2661; Viruses - 19; Other Eukaryotes - 454 (source: NCBI BLink). & (gnl|cdd|67150 : 335.0) no description available & (q84tq7|gai_goshi : 231.0) DELLA protein GAI (Gibberellic acid-insensitive mutant protein) (GhGAI) - Gossypium hirsutum (Upland cotton) & (reliability: 1244.0) & (original description: Putative SCR, Description = Protein SCARECROW, PFAM = PF03514)' T '33.99' 'development.unspecified' 'nbv0.3scaffold20201_8293-23201' '(at3g56990 : 796.0) embryo sac development arrest 7 (EDA7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: megagametogenesis; LOCATED IN: nucleolus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), NUC153 (InterPro:IPR012580), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37532 : 667.0) no description available & (reliability: 1592.0) & (original description: Putative enp2, Description = Nucleolar protein 10, PFAM = PF08159;PF00400)' T '33.99' 'development.unspecified' 'nbv0.3scaffold20312_1-12594' '(at2g03140 : 1165.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: esterase/lipase/thioesterase family protein (TAIR:AT3G50790.1). & (gnl|cdd|37049 : 299.0) no description available & (gnl|cdd|30778 : 148.0) no description available & (reliability: 2330.0) & (original description: Putative PGSC0003DMG400013574, Description = Os09g0436800 protein, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.3scaffold20608_27199-32974' '(at1g45230 : 224.0) Protein of unknown function (DUF3223); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3223 (InterPro:IPR021602); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3223) (TAIR:AT3G46630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative DCL, Description = Protein DCL, chloroplastic, PFAM = PF11523)' T '33.99' 'development.unspecified' 'nbv0.3scaffold20637_26135-33052' '(at5g22640 : 449.0) EMB1211 is a MORN (multiple membrane occupation and recognition nexus) motif containing protein involved in embryo development and chloroplast biogenesis.; embryo defective 1211 (emb1211); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chloroplast organization, embryo development, embryo development ending in seed dormancy; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MORN motif (InterPro:IPR003409). & (reliability: 898.0) & (original description: Putative emb1211, Description = Membrane Occupation and Recognition Nexus repeat-containing family protein, PFAM = PF02493;PF02493;PF02493)' T '33.99' 'development.unspecified' 'nbv0.3scaffold21314_16795-31261' '(at1g34340 : 601.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G49950.1); Has 2391 Blast hits to 2388 proteins in 904 species: Archae - 0; Bacteria - 1410; Metazoa - 329; Fungi - 194; Plants - 136; Viruses - 0; Other Eukaryotes - 322 (source: NCBI BLink). & (gnl|cdd|37049 : 425.0) no description available & (gnl|cdd|30778 : 234.0) no description available & (reliability: 1202.0) & (original description: Putative LEA, Description = Late embryogenesis abundant protein, PFAM = PF00561)' T '33.99' 'development.unspecified' 'nbv0.3scaffold21921_2356-11881' '(at3g06790 : 267.0) plastid developmental protein DAG, putative; CONTAINS InterPro DOMAIN/s: Peptidase S8, subtilisin-related (InterPro:IPR015500); BEST Arabidopsis thaliana protein match is: cobalt ion binding (TAIR:AT3G15000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q38732|dag_antma : 146.0) DAG protein, chloroplast precursor - Antirrhinum majus (Garden snapdragon) & (reliability: 534.0) & (original description: Putative MORF3, Description = Multiple organellar RNA editing factor 3, mitochondrial, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.3scaffold21974_6982-22615' '(at1g71270 : 1070.0) Encodes a homolog of the yeast Vps52p/SAC2. Involved in pollen tube germination and growth. Located in multiple endomembrane organelles including the golgi. The yeast protein has been shown to be located at the late Golgi and to function in a complex involved in retrograde trafficking of vesicles between the early endosomal compartment and the trans-Golgi network.; POKY POLLEN TUBE (POK); CONTAINS InterPro DOMAIN/s: Vps52/Sac2 (InterPro:IPR007258); BEST Arabidopsis thaliana protein match is: Vps52 / Sac2 family (TAIR:AT1G71300.1); Has 820 Blast hits to 773 proteins in 240 species: Archae - 10; Bacteria - 70; Metazoa - 261; Fungi - 156; Plants - 82; Viruses - 2; Other Eukaryotes - 239 (source: NCBI BLink). & (gnl|cdd|37172 : 769.0) no description available & (gnl|cdd|67733 : 551.0) no description available & (reliability: 2140.0) & (original description: Putative VPS52, Description = Vacuolar protein sorting-associated protein 52 A, PFAM = PF04129)' T '33.99' 'development.unspecified' 'nbv0.3scaffold22324_20067-25345' '(at2g24430 : 305.0) Arabidopsis NAC domain containing protein 39 (ANAC039); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, hypocotyl, root, leaf; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 58 (TAIR:AT3G18400.1); Has 3031 Blast hits to 3023 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 6; Plants - 3020; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 215.0) no description available & (q5cd17|nac77_orysa : 210.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 610.0) & (original description: Putative NH19, Description = Nam-like protein 19, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.3scaffold22324_20511-25313' '(at2g24430 : 241.0) Arabidopsis NAC domain containing protein 39 (ANAC039); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, hypocotyl, root, leaf; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 58 (TAIR:AT3G18400.1); Has 3031 Blast hits to 3023 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 6; Plants - 3020; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q5cd17|nac77_orysa : 169.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (gnl|cdd|66085 : 154.0) no description available & (reliability: 482.0) & (original description: Putative cuc3, Description = Protein CUP-SHAPED COTYLEDON 2, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.3scaffold22577_23043-31068' '(at1g21460 : 140.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT5G53190.1); Has 988 Blast hits to 930 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 221; Fungi - 0; Plants - 643; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36836 : 84.1) no description available & (reliability: 280.0) & (original description: Putative SWEET1, Description = Bidirectional sugar transporter SWEET, PFAM = PF03083)' T '33.99' 'development.unspecified' 'nbv0.3scaffold23091_26004-29709' '(at5g07050 : 408.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT2G40900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 816.0) & (original description: Putative nlp1, Description = WAT1-related protein, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'nbv0.3scaffold23498_3107-8643' '(at1g25580 : 486.0) Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage.; SUPPRESSOR OF GAMMA RADIATION 1 (SOG1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, response to gamma radiation, DNA damage checkpoint, regulation of meiosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 85 (TAIR:AT5G14490.1); Has 2166 Blast hits to 2160 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 22; Fungi - 5; Plants - 2134; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66085 : 109.0) no description available & (reliability: 972.0) & (original description: Putative NAC008, Description = NAC domain-containing protein 8, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.3scaffold23578_26421-30070' '(at3g22550 : 160.0) Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT3G63210.1); Has 558 Blast hits to 549 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 558; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68153 : 80.4) no description available & (reliability: 320.0) & (original description: Putative F383_03490, Description = Phosphoenolpyruvate carboxykinase [ATP], PFAM = PF04570)' T '33.99' 'development.unspecified' 'nbv0.3scaffold23771_2211-6328' '(at4g28050 : 139.0) Member of TETRASPANIN family; tetraspanin7 (TET7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, conserved site (InterPro:IPR018503), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: tetraspanin8 (TAIR:AT2G23810.1); Has 591 Blast hits to 589 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 150; Fungi - 0; Plants - 430; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative PGSC0003DMG400000657, Description = , PFAM = PF00335)' T '33.99' 'development.unspecified' 'nbv0.3scaffold23783_2089-18797' '(at5g25220 : 381.0) A member of class II knotted1-like homeobox gene family (together with KNAT4 and KNAT5). Expressed in: hypocotyl-root boundary, anther-filament junction in flowers, ovule-funiculus and peduncle-silique boundaries, petioles and root. Light-regulated expression with differential response to red/far-red light. KNAT3 promoter activity showed cell-type specific pattern along longitudinal root axis, restricted mainly to the differentiation zone of the root, namely in the cortex and pericycle. Not detected in lateral root primordia; KNOTTED1-like homeobox gene 3 (KNAT3); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to light stimulus, detection of cytokinin stimulus, cellular response to cytokine stimulus; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 35 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ELK (InterPro:IPR005539), KNOX1 (InterPro:IPR005540), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), KNOX2 (InterPro:IPR005541), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 4 (TAIR:AT5G11060.1); Has 6026 Blast hits to 5994 proteins in 341 species: Archae - 0; Bacteria - 2; Metazoa - 2058; Fungi - 371; Plants - 3387; Viruses - 4; Other Eukaryotes - 204 (source: NCBI BLink). & (o04136|knap3_maldo : 374.0) Homeobox protein knotted-1-like 3 (KNAP3) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|35992 : 160.0) no description available & (reliability: 694.0) & (original description: Putative KNAT5, Description = Homeobox protein knotted-1-like 5, PFAM = PF03790;PF03791;PF05920)' T '33.99' 'development.unspecified' 'nbv0.3scaffold24096_18659-22530' '(gnl|cdd|70011 : 150.0) no description available & (at3g48140 : 136.0) B12D protein; CONTAINS InterPro DOMAIN/s: B12D (InterPro:IPR010530); BEST Arabidopsis thaliana protein match is: B12D protein (TAIR:AT3G29970.1); Has 143 Blast hits to 143 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative b12D, Description = B12D-like protein, PFAM = PF06522)' T '33.99' 'development.unspecified' 'nbv0.3scaffold24696_1-4721' '(at1g69120 : 212.0) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.; APETALA1 (AP1); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 8031 Blast hits to 8015 proteins in 981 species: Archae - 10; Bacteria - 56; Metazoa - 785; Fungi - 329; Plants - 6623; Viruses - 2; Other Eukaryotes - 226 (source: NCBI BLink). & (q42429|agl8_soltu : 212.0) Agamous-like MADS-box protein AGL8 homolog (POTM1-1) - Solanum tuberosum (Potato) & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 101.0) no description available & (reliability: 424.0) & (original description: Putative m15, Description = FRUITFULL-like protein, PFAM = PF01486;PF00319)' T '33.99' 'development.unspecified' 'nbv0.3scaffold25159_1320-9287' '(at1g21850 : 303.0) SKU5 similar 8 (sks8); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 7 (TAIR:AT1G21860.1); Has 5145 Blast hits to 5091 proteins in 951 species: Archae - 16; Bacteria - 1604; Metazoa - 263; Fungi - 1857; Plants - 1262; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|36477 : 288.0) no description available & (q00624|aso_brana : 262.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 103.0) no description available & (reliability: 550.0) & (original description: Putative glysoja_017008, Description = Monocopper oxidase-like protein SKU5, PFAM = PF07732;PF07731;PF00394)' T '33.99' 'development.unspecified' 'nbv0.3scaffold25266_1-4211' '(at3g18400 : 267.0) NAC domain containing protein 58 (NAC058); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 38 (TAIR:AT2G24430.2); Has 3056 Blast hits to 3045 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3049; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|66085 : 222.0) no description available & (q5cd17|nac77_orysa : 204.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 534.0) & (original description: Putative NH15, Description = Nam-like protein 15, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.3scaffold25600_6654-11729' '(at3g47650 : 116.0) DnaJ/Hsp40 cysteine-rich domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 88 Blast hits to 88 proteins in 28 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative bsd2, Description = Bundle sheath defective protein 2, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.3scaffold25691_1185-12728' '(at4g11270 : 1247.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 2494.0) & (original description: Putative At4g11270, Description = Putative uncharacterized protein AT4g11270, PFAM = PF00400)' T '33.99' 'development.unspecified' 'nbv0.3scaffold26335_4750-8910' '(at5g20700 : 97.4) Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT1G74940.1); Has 476 Blast hits to 476 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 476; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 194.8) & (original description: Putative dl4870c, Description = BnaC07g19900D protein, PFAM = PF04570)' T '33.99' 'development.unspecified' 'nbv0.3scaffold26355_13638-16722' '(at1g01720 : 371.0) Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA.; ATAF1; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 32 (TAIR:AT1G77450.1); Has 3043 Blast hits to 3037 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3043; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q7f2l3|nac48_orysa : 349.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (gnl|cdd|66085 : 202.0) no description available & (reliability: 742.0) & (original description: Putative NAC002, Description = NAC domain-containing protein 2, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.3scaffold26365_2544-6169' '(at4g17230 : 606.0) Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family.; SCARECROW-like 13 (SCL13); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: scarecrow-like 5 (TAIR:AT1G50600.1); Has 2512 Blast hits to 2467 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 516.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 336.0) no description available & (reliability: 1212.0) & (original description: Putative SCL13, Description = Scarecrow-like protein 13, PFAM = PF03514)' T '33.99' 'development.unspecified' 'nbv0.3scaffold26660_12320-17815' '(gnl|cdd|67150 : 330.0) no description available & (q8s4w7|gai1_vitvi : 309.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 299.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 568.0) & (original description: Putative ATA, Description = Transcription factor, PFAM = PF03514)' T '33.99' 'development.unspecified' 'nbv0.3scaffold27418_10949-26879' '(at5g66170 : 142.0) Encodes a thiosulfate sulfurtransferase/rhodanese.; sulfurtransferase 18 (STR18); FUNCTIONS IN: thiosulfate sulfurtransferase activity; INVOLVED IN: aging; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G17850.1). & (gnl|cdd|36743 : 125.0) no description available & (p27626|din1_rapsa : 106.0) Senescence-associated protein DIN1 - Raphanus sativus (Radish) & (reliability: 284.0) & (original description: Putative STR18, Description = Thiosulfate sulfurtransferase 18, PFAM = PF00581)' T '33.99' 'development.unspecified' 'nbv0.3scaffold27508_23367-26939' '(at2g02450 : 244.0) NAC domain containing protein 35 (NAC035); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 94 (TAIR:AT5G39820.1); Has 5401 Blast hits to 4721 proteins in 140 species: Archae - 0; Bacteria - 7; Metazoa - 144; Fungi - 68; Plants - 2924; Viruses - 5; Other Eukaryotes - 2253 (source: NCBI BLink). & (gnl|cdd|66085 : 168.0) no description available & (q53nf7|nac71_orysa : 138.0) NAC domain-containing protein 71 (ONAC071) - Oryza sativa (Rice) & (reliability: 488.0) & (original description: Putative FEZ, Description = Putative NAC domain-containing protein 94, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.3scaffold28029_2133-8454' '(at3g58040 : 459.0) Encodes a RING finger domain containing protein that interacts with AtRAP2.2.; seven in absentia of Arabidopsis 2 (SINAT2); FUNCTIONS IN: protein binding; INVOLVED IN: multicellular organismal development, protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Seven-in-absentia protein, TRAF-like domain (InterPro:IPR018121), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, SIAH-type (InterPro:IPR013010), Seven In Absentia Homolog-type (InterPro:IPR013323), Seven-in-absentia protein, sina (InterPro:IPR004162), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT2G41980.1); Has 1862 Blast hits to 1847 proteins in 701 species: Archae - 0; Bacteria - 0; Metazoa - 1276; Fungi - 4; Plants - 482; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink). & (gnl|cdd|38212 : 294.0) no description available & (gnl|cdd|86255 : 256.0) no description available & (q8t3y0|sinal_drome : 147.0) Probable E3 ubiquitin-protein ligase sina-like CG13030 (EC 6.3.2.-) - Drosophila melanogaster (Fruit fly) & (reliability: 918.0) & (original description: Putative SINAT2, Description = E3 ubiquitin-protein ligase SINAT2, PFAM = PF03145)' T '33.99' 'development.unspecified' 'nbv0.3scaffold28086_8040-12449' '(at1g22160 : 88.2) Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT1G78020.1); Has 511 Blast hits to 511 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 511; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative , Description = , PFAM = PF04570)' T '33.99' 'development.unspecified' 'nbv0.3scaffold28459_22057-26257' '(at1g58250 : 195.0) SABRE, putative gene of unknown function, homologous to maize apt1 gene. Required for normal cell expansion in the root cortex. The sabre mutation results in abnormal cell expansion. Encodes a rare message; very low level of expression was detected in roots and shoots.; SABRE (SAB); CONTAINS InterPro DOMAIN/s: Protein of unknown function FMP27, domain-6, C-terminal (InterPro:IPR019443), Protein of unknown function FMP27, domain-4 (InterPro:IPR019441); BEST Arabidopsis thaliana protein match is: Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain (TAIR:AT5G49680.2). & (reliability: 390.0) & (original description: Putative HPS4, Description = BnaA01g21690D protein, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.3scaffold29788_1-3679' '(at2g02450 : 323.0) NAC domain containing protein 35 (NAC035); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 94 (TAIR:AT5G39820.1); Has 5401 Blast hits to 4721 proteins in 140 species: Archae - 0; Bacteria - 7; Metazoa - 144; Fungi - 68; Plants - 2924; Viruses - 5; Other Eukaryotes - 2253 (source: NCBI BLink). & (gnl|cdd|66085 : 204.0) no description available & (q7f2l3|nac48_orysa : 171.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (reliability: 646.0) & (original description: Putative NAC035, Description = NAC domain-containing protein 35, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.3scaffold30390_17976-23613' '(at4g10350 : 272.0) NAC domain protein. SMB, BRN1, and BRN2 act to regulate root cap maturation, in a partially redundant fashion.BRN1 and BRN2, control the cell wall maturation processes that are required to detach root cap layers from the root.; NAC domain containing protein 70 (NAC070); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 15 (TAIR:AT1G33280.1); Has 2970 Blast hits to 2965 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2970; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q5z6b6|nac76_orysa : 224.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (gnl|cdd|66085 : 200.0) no description available & (reliability: 544.0) & (original description: Putative nst1, Description = NAC domain-containing protein 43, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.3scaffold31263_15-3952' '(at5g59450 : 489.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G46600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67150 : 314.0) no description available & (q69vg1|cigr1_orysa : 203.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (reliability: 978.0) & (original description: Putative SCL11, Description = Scarecrow-like protein 11, PFAM = PF03514)' T '33.99' 'development.unspecified' 'nbv0.3scaffold31283_820-8602' '(gnl|cdd|71337 : 194.0) no description available & (at4g00650 : 160.0) Encodes a major determinant of natural variation in Arabidopsis flowering time. Dominant alleles of FRI confer a vernalization requirement causing plants to overwinter vegetatively. Many early flowering accessions carry loss-of-function fri alleles .Twenty distinct haplotypes that contain non-functional FRI alleles have been identified and the distribution analyzed in over 190 accessions. The common lab strains- Col and Ler each carry loss of function mutations in FRI.; FRIGIDA (FRI); CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT5G48385.1); Has 841 Blast hits to 841 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 841; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative PGSC0003DMG400031150, Description = Putative ovule protein, PFAM = PF07899)' T '33.99' 'development.unspecified' 'nbv0.3scaffold32220_11602-21777' '(at1g34550 : 635.0) EMBRYO DEFECTIVE 2756 (EMB2756); INVOLVED IN: response to cadmium ion, embryo development ending in seed dormancy; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF616 (InterPro:IPR006852); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF616) (TAIR:AT4G09630.1); Has 593 Blast hits to 590 proteins in 103 species: Archae - 14; Bacteria - 45; Metazoa - 74; Fungi - 32; Plants - 255; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (gnl|cdd|68342 : 455.0) no description available & (reliability: 1270.0) & (original description: Putative BnaAnng02230D, Description = BnaAnng02230D protein, PFAM = PF04765)' T '33.99' 'development.unspecified' 'nbv0.3scaffold32663_11374-18193' '(at1g75900 : 404.0) GDSL-like Lipase/Acylhydrolase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G75880.2); Has 3444 Blast hits to 3405 proteins in 204 species: Archae - 0; Bacteria - 282; Metazoa - 0; Fungi - 26; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|58514 : 387.0) no description available & (p40603|apg_brana : 258.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 808.0) & (original description: Putative EXL3, Description = GDSL esterase/lipase EXL3, PFAM = PF00657)' T '33.99' 'development.unspecified' 'nbv0.3scaffold32815_13134-19636' '(at4g36920 : 335.0) Encodes a floral homeotic gene, a member of the AP2/EREBP (ethylene responsive element binding protein) class of transcription factors and is involved in the specification of floral organ identity, establishment of floral meristem identity, suppression of floral meristem indeterminancy, and development of the ovule and seed coat. AP2 also has a role in controlling seed mass. Dominant negative allele I28, revealed a function in meristem maintenance-mutant meristems are smaller than normal siblings. AP2 appears to act on the WUS-CLV pathway in an AG independent manner.; APETALA 2 (AP2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 3 (TAIR:AT5G67180.1). & (q8l3u3|bbm1_brana : 154.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 91.8) no description available & (reliability: 670.0) & (original description: Putative TOE3, Description = AP2-like ethylene-responsive transcription factor TOE3, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'nbv0.3scaffold33478_3156-7426' '(at4g00150 : 387.0) HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 258.0) no description available & (q8s4w7|gai1_vitvi : 122.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 774.0) & (original description: Putative LOM, Description = LOM-like transcription factor, PFAM = PF03514)' T '33.99' 'development.unspecified' 'nbv0.3scaffold33538_1-4797' '(at5g06710 : 194.0) Homeobox-leucine zipper protein.; homeobox from Arabidopsis thaliana (HAT14); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT4G17460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35704 : 141.0) no description available & (reliability: 388.0) & (original description: Putative HAT1, Description = Homeobox associated leucine zipper protein, PFAM = PF02183;PF00046)' T '33.99' 'development.unspecified' 'nbv0.3scaffold34139_9593-18354' '(at3g18390 : 759.0) embryo defective 1865 (EMB1865); FUNCTIONS IN: RNA binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: CRM family member 3B (TAIR:AT4G14510.1); Has 1281 Blast hits to 1142 proteins in 135 species: Archae - 11; Bacteria - 10; Metazoa - 285; Fungi - 118; Plants - 447; Viruses - 43; Other Eukaryotes - 367 (source: NCBI BLink). & (gnl|cdd|37201 : 411.0) no description available & (gnl|cdd|85815 : 87.5) no description available & (reliability: 1518.0) & (original description: Putative Os08g0360100, Description = Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic, PFAM = PF01985;PF01985;PF01985)' T '33.99' 'development.unspecified' 'nbv0.3scaffold34634_9147-18983' '(at1g18750 : 122.0) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL65 is expressed in pollen.It forms heterodimers with other MICK family members (AGL104). Involved in late stages of pollen development and pollen tube growth.; AGAMOUS-like 65 (AGL65); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 30 (TAIR:AT2G03060.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative mads1, Description = MIKC* MADS-box transcription factor, PFAM = PF00319)' T '33.99' 'development.unspecified' 'nbv0.3scaffold34902_1-8990' '(at1g19270 : 637.0) DA1 (DA1); CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Ubiquitin interacting motif (InterPro:IPR003903), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: LIM domain-containing protein (TAIR:AT4G36860.1); Has 3538 Blast hits to 2617 proteins in 167 species: Archae - 0; Bacteria - 18; Metazoa - 3009; Fungi - 63; Plants - 177; Viruses - 0; Other Eukaryotes - 271 (source: NCBI BLink). & (gnl|cdd|36916 : 241.0) no description available & (reliability: 1216.0) & (original description: Putative DA1, Description = Protein DA1, PFAM = PF00412;PF12315)' T '33.99' 'development.unspecified' 'nbv0.3scaffold35635_3929-12653' '(at2g32950 : 915.0) Represses photomorphogenesis and induces skotomorphogenesis in the dark. Contains a ring finger zinc-binding motif, a coiled-coil domain, and several WD-40 repeats, similar to G-beta proteins. The C-terminus has homology to TAFII80, a subunit of the TFIID component of the RNA polymerase II of Drosophila. Nuclear localization in the dark and cytoplasmic in the light.; CONSTITUTIVE PHOTOMORPHOGENIC 1 (COP1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA1-related 2 (TAIR:AT4G11110.1); Has 42218 Blast hits to 27649 proteins in 756 species: Archae - 30; Bacteria - 4454; Metazoa - 17716; Fungi - 8958; Plants - 5306; Viruses - 46; Other Eukaryotes - 5708 (source: NCBI BLink). & (p93471|cop1_pea : 914.0) E3 ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive photomorphogenesis protein 1) - Pisum sativum (Garden pea) & (gnl|cdd|29257 : 128.0) no description available & (gnl|cdd|35486 : 96.5) no description available & (reliability: 1830.0) & (original description: Putative RFWD2, Description = E3 ubiquitin-protein ligase RFWD2, PFAM = PF13923;PF00400;PF00400)' T '33.99' 'development.unspecified' 'nbv0.3scaffold35717_15166-20153' '(at3g51280 : 493.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G48850.1); Has 898 Blast hits to 725 proteins in 125 species: Archae - 8; Bacteria - 246; Metazoa - 0; Fungi - 4; Plants - 180; Viruses - 0; Other Eukaryotes - 460 (source: NCBI BLink). & (reliability: 986.0) & (original description: Putative BnaCnng05220D, Description = BnaCnng05220D protein, PFAM = PF00515)' T '33.99' 'development.unspecified' 'nbv0.3scaffold37173_1-20284' '(at5g18410 : 1231.0) distorted trichomes and exhibits a diffuse actin cytoskeleton; PIROGI 121 (PIR121); FUNCTIONS IN: transcription activator activity; INVOLVED IN: actin nucleation, trichome morphogenesis, actin cytoskeleton organization; LOCATED IN: SCAR complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytoplasmic FMR1-interacting (InterPro:IPR008081); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38742 : 366.0) no description available & (gnl|cdd|69514 : 363.0) no description available & (reliability: 2462.0) & (original description: Putative KLK, Description = Protein PIR, PFAM = PF05994;PF05994;PF07159)' T '33.99' 'development.unspecified' 'nbv0.3scaffold37299_33370-36701' '(at1g30950 : 495.0) Required for the proper identity of the floral meristem. Involved in establishing the whorled pattern of floral organs, in the control of specification of the floral meristem, and in the activation of APETALA3 and PISTILLATA. UFO is found at the AP3 promoter in a LFY-dependent manner, suggesting that it works with LFY to regulate AP3 expression. UFO may also promote the ubiquitylation of LFY.; UNUSUAL FLORAL ORGANS (UFO); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G15710.1); Has 431 Blast hits to 429 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 431; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 990.0) & (original description: Putative UFO, Description = Protein UNUSUAL FLORAL ORGANS, PFAM = PF00646)' T '33.99' 'development.unspecified' 'nbv0.3scaffold38500_4429-8586' '(at1g65480 : 248.0) FT, together with LFY, promotes flowering and is antagonistic with its homologous gene, TERMINAL FLOWER1 (TFL1). FT is expressed in leaves and is induced by long day treatment. Either the FT mRNA or protein is translocated to the shoot apex where it induces its own expression. Recent data suggests that FT protein acts as a long-range signal. FT is a target of CO and acts upstream of SOC1.; FLOWERING LOCUS T (FT); FUNCTIONS IN: phosphatidylethanolamine binding, protein binding; INVOLVED IN: photoperiodism, flowering, positive regulation of flower development, regulation of flower development; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); BEST Arabidopsis thaliana protein match is: PEBP (phosphatidylethanolamine-binding protein) family protein (TAIR:AT4G20370.1); Has 2182 Blast hits to 2182 proteins in 306 species: Archae - 0; Bacteria - 0; Metazoa - 594; Fungi - 140; Plants - 1404; Viruses - 3; Other Eukaryotes - 41 (source: NCBI BLink). & (q9xh43|cet2_tobac : 170.0) CEN-like protein 2 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|38556 : 170.0) no description available & (gnl|cdd|29585 : 150.0) no description available & (reliability: 496.0) & (original description: Putative FT4, Description = Flowering locus T, PFAM = PF01161)' T '33.99' 'development.unspecified' 'nbv0.3scaffold38819_5341-9621' '(at3g43660 : 214.0) Vacuolar iron transporter (VIT) family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217); BEST Arabidopsis thaliana protein match is: Vacuolar iron transporter (VIT) family protein (TAIR:AT3G43630.1); Has 1844 Blast hits to 1835 proteins in 644 species: Archae - 71; Bacteria - 1261; Metazoa - 0; Fungi - 84; Plants - 213; Viruses - 0; Other Eukaryotes - 215 (source: NCBI BLink). & (gnl|cdd|39674 : 207.0) no description available & (p16313|no21_soybn : 157.0) Nodulin 21 (N-21) - Glycine max (Soybean) & (gnl|cdd|29967 : 143.0) no description available & (reliability: 428.0) & (original description: Putative At3g43660, Description = Vacuolar iron transporter homolog 4, PFAM = PF01988;PF01988)' T '33.99' 'development.unspecified' 'nbv0.3scaffold39301_9397-19690' '(at2g17250 : 649.0) EMBRYO DEFECTIVE 2762 (EMB2762); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding factor (InterPro:IPR005612); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37365 : 291.0) no description available & (gnl|cdd|67525 : 145.0) no description available & (reliability: 1298.0) & (original description: Putative EMB2762, Description = CCAAT-binding factor, PFAM = PF03914)' T '33.99' 'development.unspecified' 'nbv0.3scaffold39301_12137-17380' '(at2g17250 : 203.0) EMBRYO DEFECTIVE 2762 (EMB2762); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding factor (InterPro:IPR005612); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37365 : 132.0) no description available & (reliability: 406.0) & (original description: Putative noc4l, Description = Nucleolar complex protein 4 B, PFAM = PF03914)' T '33.99' 'development.unspecified' 'nbv0.3scaffold39538_2467-4786' '(gnl|cdd|35504 : 121.0) no description available & (at3g15470 : 120.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G54200.1); Has 35932 Blast hits to 22007 proteins in 749 species: Archae - 56; Bacteria - 5680; Metazoa - 13723; Fungi - 7656; Plants - 4267; Viruses - 6; Other Eukaryotes - 4544 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative At2g37670, Description = WD repeat-containing protein 44, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.3scaffold39594_12796-19616' '(at3g05000 : 297.0) Transport protein particle (TRAPP) component; CONTAINS InterPro DOMAIN/s: Transport protein particle (TRAPP) component (InterPro:IPR007194); Has 457 Blast hits to 457 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 198; Fungi - 137; Plants - 66; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|38526 : 207.0) no description available & (gnl|cdd|86520 : 148.0) no description available & (reliability: 594.0) & (original description: Putative TRS33, Description = Component of TRAPP complex, PFAM = PF04051)' T '33.99' 'development.unspecified' 'nbv0.3scaffold39800_10395-16150' '(at3g49530 : 264.0) Transcription factor that serves as a molecular link between cold signals and pathogen resistance responses. Undergoes proteolytic processing triggered by cold-induced changes in membrane fluidity.; NAC domain containing protein 62 (NAC062); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: TCV-interacting protein (TAIR:AT5G24590.2); Has 2933 Blast hits to 2926 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2931; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 200.0) no description available & (q5z6b6|nac76_orysa : 155.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (reliability: 528.0) & (original description: Putative NAC091, Description = NAC domain-containing protein 91, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.3scaffold39807_688-3965' '(at4g18830 : 109.0) Member of the ovate protein family.Interacts with BLH1 and KNAT3. Regulates the subcellular localization of BLH1.; ovate family protein 5 (OFP5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 4 (TAIR:AT1G06920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68419 : 84.5) no description available & (reliability: 218.0) & (original description: Putative OFP1, Description = Ovate family protein 1, PFAM = PF04844)' T '33.99' 'development.unspecified' 'nbv0.3scaffold40528_11742-18959' '(at3g05000 : 226.0) Transport protein particle (TRAPP) component; CONTAINS InterPro DOMAIN/s: Transport protein particle (TRAPP) component (InterPro:IPR007194); Has 457 Blast hits to 457 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 198; Fungi - 137; Plants - 66; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|38526 : 174.0) no description available & (gnl|cdd|86520 : 126.0) no description available & (reliability: 452.0) & (original description: Putative Sb06g014440, Description = Putative uncharacterized protein Sb06g014440, PFAM = PF04051)' T '33.99' 'development.unspecified' 'nbv0.3scaffold40946_1196-3371' '(at4g32551 : 159.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (reliability: 318.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.3scaffold41185_1-6336' '(at4g29230 : 306.0) NAC domain containing protein 75 (NAC075); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 99 (TAIR:AT5G56620.1); Has 3052 Blast hits to 2928 proteins in 176 species: Archae - 2; Bacteria - 22; Metazoa - 475; Fungi - 52; Plants - 2293; Viruses - 3; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|66085 : 133.0) no description available & (reliability: 612.0) & (original description: Putative NAC1, Description = NAC domain-containing protein 8, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.3scaffold43042_789-15590' '(at2g32950 : 984.0) Represses photomorphogenesis and induces skotomorphogenesis in the dark. Contains a ring finger zinc-binding motif, a coiled-coil domain, and several WD-40 repeats, similar to G-beta proteins. The C-terminus has homology to TAFII80, a subunit of the TFIID component of the RNA polymerase II of Drosophila. Nuclear localization in the dark and cytoplasmic in the light.; CONSTITUTIVE PHOTOMORPHOGENIC 1 (COP1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA1-related 2 (TAIR:AT4G11110.1); Has 42218 Blast hits to 27649 proteins in 756 species: Archae - 30; Bacteria - 4454; Metazoa - 17716; Fungi - 8958; Plants - 5306; Viruses - 46; Other Eukaryotes - 5708 (source: NCBI BLink). & (p93471|cop1_pea : 941.0) E3 ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive photomorphogenesis protein 1) - Pisum sativum (Garden pea) & (gnl|cdd|29257 : 98.1) no description available & (gnl|cdd|35518 : 83.2) no description available & (reliability: 1968.0) & (original description: Putative COP1, Description = E3 ubiquitin-protein ligase COP1, PFAM = PF00400;PF13923)' T '33.99' 'development.unspecified' 'nbv0.3scaffold45894_367-13478' '(at1g80490 : 1019.0) TOPLESS-related 1 (TPR1); INVOLVED IN: primary shoot apical meristem specification; LOCATED IN: cytosol; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT1G15750.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35487 : 109.0) no description available & (gnl|cdd|29257 : 97.4) no description available & (reliability: 2038.0) & (original description: Putative TPL, Description = Protein TOPLESS, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'nbv0.3scaffold45911_1993-12276' '(at4g27760 : 556.0) Encodes an oxidoreductase required for vegetative shoot apex development. Mutants display disruptions in leaf positioning and meristem maintenance.; FOREVER YOUNG (FEY); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: multicellular organismal development, meristem maintenance; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G53090.1); Has 74609 Blast hits to 74569 proteins in 3131 species: Archae - 650; Bacteria - 51148; Metazoa - 4951; Fungi - 3783; Plants - 2113; Viruses - 0; Other Eukaryotes - 11964 (source: NCBI BLink). & (gnl|cdd|36422 : 272.0) no description available & (gnl|cdd|81882 : 155.0) no description available & (q9sdt1|por_dauca : 86.7) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Daucus carota (Carrot) & (reliability: 1112.0) & (original description: Putative FEY, Description = Oxidoreductase FEY3, PFAM = PF00106;PF00106)' T '33.99' 'development.unspecified' 'nbv0.3scaffold46129_692-7280' '(at4g29230 : 447.0) NAC domain containing protein 75 (NAC075); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 99 (TAIR:AT5G56620.1); Has 3052 Blast hits to 2928 proteins in 176 species: Archae - 2; Bacteria - 22; Metazoa - 475; Fungi - 52; Plants - 2293; Viruses - 3; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|66085 : 136.0) no description available & (reliability: 894.0) & (original description: Putative NAC16, Description = NAC domain protein, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.3scaffold47044_9314-12307' '(at2g31070 : 115.0) TCP family protein involved in heterchronic regulation of leaf differentiation.; TCP domain protein 10 (TCP10); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor 4 (TAIR:AT3G15030.3); Has 1897 Blast hits to 1802 proteins in 357 species: Archae - 0; Bacteria - 4; Metazoa - 259; Fungi - 36; Plants - 1423; Viruses - 0; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|67262 : 103.0) no description available & (reliability: 218.0) & (original description: Putative BRC1, Description = Transcription factor PCF8, PFAM = PF03634)' T '33.99' 'development.unspecified' 'nbv0.3scaffold47601_4577-10922' '(at3g47650 : 109.0) DnaJ/Hsp40 cysteine-rich domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 88 Blast hits to 88 proteins in 28 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative bsd2, Description = Bundle sheath defective protein 2, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.3scaffold48353_5938-12153' '(at5g20700 : 90.5) Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT1G74940.1); Has 476 Blast hits to 476 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 476; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative , Description = , PFAM = PF04570)' T '33.99' 'development.unspecified' 'nbv0.3scaffold48508_11352-15249' '(gnl|cdd|35991 : 280.0) no description available & (at2g20330 : 272.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 32306 Blast hits to 19564 proteins in 654 species: Archae - 48; Bacteria - 6195; Metazoa - 11628; Fungi - 6530; Plants - 3814; Viruses - 23; Other Eukaryotes - 4068 (source: NCBI BLink). & (reliability: 544.0) & (original description: Putative wdr70, Description = Transducin/WD40 repeat-like superfamily protein, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'nbv0.3scaffold50584_5708-14962' '(gnl|cdd|58514 : 172.0) no description available & (at1g75880 : 147.0) SGNH hydrolase-type esterase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G75890.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p40603|apg_brana : 117.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 294.0) & (original description: Putative EXL1, Description = GDSL esterase/lipase EXL3, PFAM = PF00657)' T '33.99' 'development.unspecified' 'nbv0.3scaffold50740_11702-14729' '(q43585|ag_tobac : 211.0) Floral homeotic protein AGAMOUS (NAG1) - Nicotiana tabacum (Common tobacco) & (at4g18960 : 140.0) Floral homeotic gene encoding a MADS domain transcription factor. Specifies floral meristem and carpel and stamen identity. Binds CArG box sequences. It is the only C function gene. It interacts genetically with the other homeotic genes to specify the floral organs.; AGAMOUS (AG); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: stamen development, maintenance of floral organ identity, leaf development, carpel development; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT3G58780.3). & (gnl|cdd|85485 : 80.6) no description available & (reliability: 280.0) & (original description: Putative AG, Description = Agamous, PFAM = PF01486)' T '33.99' 'development.unspecified' 'nbv0.3scaffold52101_755-5747' '(gnl|cdd|69106 : 99.0) no description available & (at1g28330 : 95.5) dormancy-associated protein (DRM1); dormancy-associated protein-like 1 (DYL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to fructose stimulus, response to sucrose stimulus, response to glucose stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dormancyauxin associated (InterPro:IPR008406); BEST Arabidopsis thaliana protein match is: Dormancy/auxin associated family protein (TAIR:AT2G33830.2). & (reliability: 191.0) & (original description: Putative ARP1, Description = Dormancy-associated protein 1, PFAM = PF05564)' T '33.99' 'development.unspecified' 'nbv0.3scaffold52963_10520-14131' '(gnl|cdd|36401 : 345.0) no description available & (at1g52540 : 302.0) Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G15890.1); Has 98543 Blast hits to 97377 proteins in 3831 species: Archae - 68; Bacteria - 11032; Metazoa - 36701; Fungi - 6941; Plants - 30133; Viruses - 293; Other Eukaryotes - 13375 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 214.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 158.0) no description available & (reliability: 604.0) & (original description: Putative PERK1, Description = PTI1-like tyrosine-protein kinase, PFAM = PF00069)' T '33.99' 'development.unspecified' 'nbv0.3scaffold53321_1-13911' '(at3g24460 : 506.0) Serinc-domain containing serine and sphingolipid biosynthesis protein; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: TMS membrane protein/tumour differentially expressed protein (InterPro:IPR005016); BEST Arabidopsis thaliana protein match is: Serinc-domain containing serine and sphingolipid biosynthesis protein (TAIR:AT4G13345.1); Has 800 Blast hits to 764 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 443; Fungi - 147; Plants - 141; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|66988 : 190.0) no description available & (gnl|cdd|37803 : 188.0) no description available & (reliability: 988.0) & (original description: Putative MEE55, Description = Putative uncharacterized protein At4g13345, PFAM = PF03348;PF03348)' T '33.99' 'development.unspecified' 'nbv0.3scaffold53695_3718-11625' '(at5g66240 : 537.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G14530.1). & (gnl|cdd|36659 : 359.0) no description available & (gnl|cdd|29257 : 134.0) no description available & (reliability: 1074.0) & (original description: Putative WDR82, Description = COMPASS component SWD2, PFAM = PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'nbv0.3scaffold56815_1669-5417' '(at3g48740 : 279.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: homolog of Medicago truncatula MTN3 (TAIR:AT5G23660.1); Has 1006 Blast hits to 953 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 236; Fungi - 0; Plants - 627; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|36836 : 231.0) no description available & (gnl|cdd|86234 : 92.9) no description available & (reliability: 558.0) & (original description: Putative SWEET11, Description = Bidirectional sugar transporter SWEET11, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'nbv0.3scaffold58948_1-5048' '(at1g52540 : 432.0) Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G15890.1); Has 98543 Blast hits to 97377 proteins in 3831 species: Archae - 68; Bacteria - 11032; Metazoa - 36701; Fungi - 6941; Plants - 30133; Viruses - 293; Other Eukaryotes - 13375 (source: NCBI BLink). & (gnl|cdd|36401 : 370.0) no description available & (q8lpb4|pskr_dauca : 235.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 167.0) no description available & (reliability: 864.0) & (original description: Putative At3g15890, Description = PTI1-like tyrosine-protein kinase At3g15890, PFAM = PF00069)' T '33.99' 'development.unspecified' 'nbv0.3scaffold59951_2578-8469' '(at2g39510 : 354.0) nodulin MtN21 /EamA-like transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT2G37460.1); Has 4772 Blast hits to 4753 proteins in 819 species: Archae - 36; Bacteria - 2386; Metazoa - 4; Fungi - 0; Plants - 1228; Viruses - 0; Other Eukaryotes - 1118 (source: NCBI BLink). & (reliability: 708.0) & (original description: Putative nlp1, Description = WAT1-related protein, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'nbv0.3scaffold60646_563-5394' '(at5g04410 : 247.0) NAC family member, functions as a transcriptional activator, regulates flavonoid biosynthesis under high light.; NAC domain containing protein 2 (NAC2); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 53 (TAIR:AT3G10500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66085 : 188.0) no description available & (q7gcl7|nac74_orysa : 164.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 494.0) & (original description: Putative NH13, Description = Nam-like protein 13, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.3scaffold61297_753-4411' '(at3g02380 : 291.0) homologous to the flowering-time gene CONSTANS (CO) encoding zinc-finger proteins; CONSTANS-like 2 (COL2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of flower development; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT5G15840.1); Has 3185 Blast hits to 2478 proteins in 141 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2995; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (gnl|cdd|87043 : 84.1) no description available & (reliability: 582.0) & (original description: Putative COL2, Description = Zinc finger protein CONSTANS-LIKE 2, PFAM = PF06203;PF00643)' T '33.99' 'development.unspecified' 'nbv0.3scaffold62364_6140-9825' '(at1g12260 : 309.0) Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.; NAC 007 (NAC007); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: Arabidopsis NAC domain containing protein 26 (TAIR:AT1G62700.1); Has 3158 Blast hits to 3153 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 2; Plants - 3027; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (q5z6b6|nac76_orysa : 208.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (gnl|cdd|66085 : 208.0) no description available & (reliability: 618.0) & (original description: Putative SWN2, Description = SWN2, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.3scaffold63299_840-9206' '(at1g78130 : 415.0) unfertilized embryo sac 2 (UNE2); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G10190.1); Has 16910 Blast hits to 16851 proteins in 2099 species: Archae - 450; Bacteria - 14339; Metazoa - 386; Fungi - 319; Plants - 340; Viruses - 3; Other Eukaryotes - 1073 (source: NCBI BLink). & (gnl|cdd|36544 : 276.0) no description available & (reliability: 830.0) & (original description: Putative UNE2, Description = Transporter-like protein, PFAM = PF07690)' T '33.99' 'development.unspecified' 'nbv0.3scaffold63392_7117-9767' '(at1g12910 : 334.0) Encodes a protein with similarity to the petunia WD repeat protein an11.; ANTHOCYANIN11 (ATAN11); CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G26640.1); Has 4731 Blast hits to 4446 proteins in 351 species: Archae - 6; Bacteria - 291; Metazoa - 1848; Fungi - 1200; Plants - 767; Viruses - 0; Other Eukaryotes - 619 (source: NCBI BLink). & (gnl|cdd|35511 : 301.0) no description available & (reliability: 668.0) & (original description: Putative ttg1, Description = Transparent testa glabra 1, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'nbv0.3scaffold63491_2949-8629' '(q38732|dag_antma : 130.0) DAG protein, chloroplast precursor - Antirrhinum majus (Garden snapdragon) & (at1g11430 : 129.0) plastid developmental protein DAG, putative; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT3G06790.2); Has 252 Blast hits to 229 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 252; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative DAG, Description = Plastid developmental protein DAG, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.3scaffold63678_2031-9893' '(at2g38670 : 524.0) Encodes a mitochondrial ethanolamine-phosphate cytidylyltransferase, involved in phosphatidylethanolamine (PE) biosynthesis.; phosphorylethanolamine cytidylyltransferase 1 (PECT1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: phosphorylcholine cytidylyltransferase (TAIR:AT2G32260.1); Has 10984 Blast hits to 6001 proteins in 1666 species: Archae - 316; Bacteria - 5963; Metazoa - 682; Fungi - 448; Plants - 283; Viruses - 6; Other Eukaryotes - 3286 (source: NCBI BLink). & (gnl|cdd|38014 : 431.0) no description available & (gnl|cdd|28835 : 235.0) no description available & (reliability: 1048.0) & (original description: Putative PECT1, Description = Ethanolamine-phosphate cytidylyltransferase, PFAM = PF01467;PF01467)' T '33.99' 'development.unspecified' 'nbv0.3scaffold64862_3322-10592' '(at4g17670 : 108.0) Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT5G47060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative dl4870c, Description = BnaC01g10250D protein, PFAM = PF04570)' T '33.99' 'development.unspecified' 'nbv0.3scaffold65263_1-9234' '(at1g58250 : 383.0) SABRE, putative gene of unknown function, homologous to maize apt1 gene. Required for normal cell expansion in the root cortex. The sabre mutation results in abnormal cell expansion. Encodes a rare message; very low level of expression was detected in roots and shoots.; SABRE (SAB); CONTAINS InterPro DOMAIN/s: Protein of unknown function FMP27, domain-6, C-terminal (InterPro:IPR019443), Protein of unknown function FMP27, domain-4 (InterPro:IPR019441); BEST Arabidopsis thaliana protein match is: Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain (TAIR:AT5G49680.2). & (gnl|cdd|37121 : 115.0) no description available & (reliability: 766.0) & (original description: Putative HPS4, Description = Golgi-body localization protein, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.3scaffold65386_2122-9051' '(at5g59460 : 86.7) scarecrow-like transcription factor 11 (SCL11); CONTAINS InterPro DOMAIN/s: M-phase phosphoprotein 6 (InterPro:IPR019324); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative At5g59460, Description = At5g59460, PFAM = PF10175)' T '33.99' 'development.unspecified' 'nbv0.3scaffold66230_6589-10230' '(at2g37650 : 666.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 14 (TAIR:AT1G07530.1); Has 2417 Blast hits to 2350 proteins in 288 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 0; Plants - 2410; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|67150 : 337.0) no description available & (q8gve1|cigr2_orysa : 212.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (reliability: 1332.0) & (original description: Putative SCL9, Description = Scarecrow-like protein 9, PFAM = PF03514)' T '33.99' 'development.unspecified' 'nbv0.3scaffold66573_66-7316' '(at4g36860 : 199.0) LIM domain-containing protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Ubiquitin interacting motif (InterPro:IPR003903), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: DA1 (TAIR:AT1G19270.1); Has 6004 Blast hits to 4271 proteins in 323 species: Archae - 7; Bacteria - 228; Metazoa - 4096; Fungi - 190; Plants - 320; Viruses - 67; Other Eukaryotes - 1096 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative , Description = , PFAM = PF12315)' T '33.99' 'development.unspecified' 'nbv0.3scaffold66920_1-3258' '(at4g28530 : 101.0) NAC domain containing protein 74 (NAC074); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT5G53950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative CUC3, Description = Transcription factor, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.3scaffold67469_1-9206' '(at3g18060 : 634.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Nitrous oxide reductase, N-terminal (InterPro:IPR011045), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: nucleotide binding (TAIR:AT2G01330.2); Has 46825 Blast hits to 21434 proteins in 724 species: Archae - 58; Bacteria - 7760; Metazoa - 18076; Fungi - 9371; Plants - 5681; Viruses - 0; Other Eukaryotes - 5879 (source: NCBI BLink). & (gnl|cdd|35539 : 522.0) no description available & (gnl|cdd|29257 : 146.0) no description available & (reliability: 1268.0) & (original description: Putative WDR1, Description = Actin-interacting protein 1, PFAM = PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'nbv0.3scaffold69474_1501-6526' '(at3g18200 : 412.0) nodulin MtN21 /EamA-like transporter family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: Walls Are Thin 1 (TAIR:AT1G75500.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 824.0) & (original description: Putative nlp1, Description = WAT1-related protein, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'nbv0.3scaffold70662_932-6296' '(at1g13980 : 1546.0) Encodes a GDP/GTP exchange factor for small G-proteins of the ADP ribosylation factor (RAF) class, and as regulator of intracellular trafficking. Homologous to Sec7p and YEC2 from yeast. Involved in the specification of apical-basal pattern formation. Essential for cell division, expansion and adhesion. It appears that heteotypic binding between the DCB and C-terminal domains of two GNOM proteins is required for membrane association, however, GNOM appears to exist predominantly as a heterodimer formed through DCB-DCB interactions.; GNOM (GN); FUNCTIONS IN: protein homodimerization activity, GTP:GDP antiporter activity; INVOLVED IN: in 13 processes; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904); BEST Arabidopsis thaliana protein match is: GNOM-like 1 (TAIR:AT5G39500.1). & (gnl|cdd|36146 : 1143.0) no description available & (gnl|cdd|65184 : 262.0) no description available & (reliability: 3092.0) & (original description: Putative Sb01g012510, Description = Putative uncharacterized protein Sb01g012510, PFAM = PF12783;PF01369)' T '33.99' 'development.unspecified' 'nbv0.3scaffold70815_4149-8326' '(at5g12330 : 217.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Expressed in lateral root primordia and induced by auxin. SWP1 is involved in the repression of LRP1 via histone deacetylation.; LATERAL ROOT PRIMORDIUM 1 (LRP1); FUNCTIONS IN: protein homodimerization activity; INVOLVED IN: response to auxin stimulus, root development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Protein of unknown function DUF702 (InterPro:IPR007818), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2). & (gnl|cdd|68707 : 187.0) no description available & (reliability: 434.0) & (original description: Putative LRP1, Description = Protein LATERAL ROOT PRIMORDIUM 1, PFAM = PF05142)' T '33.99' 'development.unspecified' 'nbv0.3scaffold73650_1872-8478' '(at2g25660 : 716.0) embryo defective 2410 (emb2410); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF490 (InterPro:IPR007452); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1432.0) & (original description: Putative emb2410, Description = Embryo defective 2410 protein, PFAM = PF04357)' T '33.99' 'development.unspecified' 'nbv0.3scaffold74148_353-3051' '(at1g13980 : 317.0) Encodes a GDP/GTP exchange factor for small G-proteins of the ADP ribosylation factor (RAF) class, and as regulator of intracellular trafficking. Homologous to Sec7p and YEC2 from yeast. Involved in the specification of apical-basal pattern formation. Essential for cell division, expansion and adhesion. It appears that heteotypic binding between the DCB and C-terminal domains of two GNOM proteins is required for membrane association, however, GNOM appears to exist predominantly as a heterodimer formed through DCB-DCB interactions.; GNOM (GN); FUNCTIONS IN: protein homodimerization activity, GTP:GDP antiporter activity; INVOLVED IN: in 13 processes; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904); BEST Arabidopsis thaliana protein match is: GNOM-like 1 (TAIR:AT5G39500.1). & (gnl|cdd|36146 : 271.0) no description available & (reliability: 634.0) & (original description: Putative gbf1, Description = Pattern formation protein EMB30, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.3scaffold74316_1-8255' '(at3g13300 : 660.0) Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development.; VARICOSE (VCS); FUNCTIONS IN: protein homodimerization activity, nucleotide binding; INVOLVED IN: mRNA catabolic process, deadenylation-independent decapping of nuclear-transcribed mRNA, leaf morphogenesis; LOCATED IN: cytosol, nucleus, cytoplasmic mRNA processing body; EXPRESSED IN: whole plant, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: varicose-related (TAIR:AT3G13290.1); Has 885 Blast hits to 799 proteins in 264 species: Archae - 2; Bacteria - 218; Metazoa - 230; Fungi - 185; Plants - 114; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|37127 : 472.0) no description available & (reliability: 1320.0) & (original description: Putative EDC4, Description = Varicose-related protein, PFAM = PF16529)' T '33.99' 'development.unspecified' 'nbv0.3scaffold74907_554-6206' '(at2g22870 : 375.0) embryo defective 2001 (EMB2001); FUNCTIONS IN: GTP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein, HSR1-related (InterPro:IPR002917), GTP-binding protein, ribosome biogenesis, YsxC (InterPro:IPR019987); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G11480.1); Has 7972 Blast hits to 7922 proteins in 2512 species: Archae - 103; Bacteria - 5806; Metazoa - 98; Fungi - 230; Plants - 215; Viruses - 0; Other Eukaryotes - 1520 (source: NCBI BLink). & (gnl|cdd|37697 : 252.0) no description available & (gnl|cdd|80677 : 209.0) no description available & (reliability: 750.0) & (original description: Putative engB, Description = Probable GTP-binding protein EngB, PFAM = PF01926)' T '33.99' 'development.unspecified' 'nbv0.3scaffold75363_2508-6245' '(at2g42840 : 130.0) Encodes a putative extracellular proline-rich protein is exclusively expressed in the L1 layer of vegetative, inflorescence and floral meristems and the protoderm of organ primordia.; protodermal factor 1 (PDF1); Has 74620 Blast hits to 36810 proteins in 1713 species: Archae - 153; Bacteria - 12776; Metazoa - 27126; Fungi - 11565; Plants - 10582; Viruses - 2385; Other Eukaryotes - 10033 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative PDF1, Description = BnaC04g48550D protein, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.3scaffold75702_1-6554' '(at4g15450 : 384.0) Senescence/dehydration-associated protein-related; CONTAINS InterPro DOMAIN/s: Senescence/spartin-associated (InterPro:IPR009686); BEST Arabidopsis thaliana protein match is: Senescence/dehydration-associated protein-related (TAIR:AT3G21600.1); Has 171 Blast hits to 171 proteins in 35 species: Archae - 0; Bacteria - 4; Metazoa - 29; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|70383 : 361.0) no description available & (reliability: 768.0) & (original description: Putative , Description = Helicase-like protein, PFAM = PF06911)' T '33.99' 'development.unspecified' 'nbv0.3scaffold76599_1-1799' '(at4g00800 : 208.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type (InterPro:IPR001841), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024); Has 298 Blast hits to 228 proteins in 78 species: Archae - 0; Bacteria - 17; Metazoa - 93; Fungi - 89; Plants - 34; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (reliability: 416.0) & (original description: Putative si618080f12(37), Description = Vacuolar protein sorting-associated protein 8-like protein, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.3scaffold76668_3930-7831' '(p29162|ntp3_tobac : 564.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (at1g55570 : 542.0) SKU5 similar 12 (sks12); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 11 (TAIR:AT3G13390.1); Has 5441 Blast hits to 5412 proteins in 1035 species: Archae - 18; Bacteria - 1816; Metazoa - 269; Fungi - 1918; Plants - 1254; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|36477 : 436.0) no description available & (gnl|cdd|87357 : 150.0) no description available & (reliability: 1008.0) & (original description: Putative p303, Description = L-ascorbate oxidase-like protein, PFAM = PF07732;PF00394;PF07731)' T '33.99' 'development.unspecified' 'nbv0.3scaffold77707_3668-6597' '(at3g15030 : 149.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 115.0) no description available & (reliability: 294.0) & (original description: Putative cyc2c, Description = Transcription factor PCF8, PFAM = PF03634)' T '33.99' 'development.unspecified' 'nbv0.3scaffold80787_3225-7002' '(gnl|cdd|71337 : 175.0) no description available & (at4g00650 : 108.0) Encodes a major determinant of natural variation in Arabidopsis flowering time. Dominant alleles of FRI confer a vernalization requirement causing plants to overwinter vegetatively. Many early flowering accessions carry loss-of-function fri alleles .Twenty distinct haplotypes that contain non-functional FRI alleles have been identified and the distribution analyzed in over 190 accessions. The common lab strains- Col and Ler each carry loss of function mutations in FRI.; FRIGIDA (FRI); CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT5G48385.1); Has 841 Blast hits to 841 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 841; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative PGSC0003DMG400031151, Description = Putative ovule protein, PFAM = PF07899)' T '33.99' 'development.unspecified' 'nbv0.3scaffold82572_1-6676' '(at3g05680 : 395.0) embryo defective 2016 (EMB2016); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown. & (gnl|cdd|40019 : 259.0) no description available & (reliability: 790.0) & (original description: Putative At3g05680, Description = BnaA03g29130D protein, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.3scaffold82777_561-6547' '(at4g36860 : 207.0) LIM domain-containing protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Ubiquitin interacting motif (InterPro:IPR003903), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: DA1 (TAIR:AT1G19270.1); Has 6004 Blast hits to 4271 proteins in 323 species: Archae - 7; Bacteria - 228; Metazoa - 4096; Fungi - 190; Plants - 320; Viruses - 67; Other Eukaryotes - 1096 (source: NCBI BLink). & (gnl|cdd|36916 : 86.4) no description available & (reliability: 414.0) & (original description: Putative , Description = , PFAM = PF12315)' T '33.99' 'development.unspecified' 'nbv0.3scaffold83624_318-3412' '(at3g15030 : 123.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 107.0) no description available & (reliability: 240.0) & (original description: Putative BRC1, Description = Transcription factor PCF8, PFAM = PF03634)' T '33.99' 'development.unspecified' 'nbv0.3scaffold88342_711-5623' '(at5g43822 : 198.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative OSJNBa0057L21.18, Description = Os10g0566900 protein, PFAM = PF15011)' T '33.99' 'development.unspecified' 'nbv0.3scaffold88736_3749-5638' '(at5g43070 : 95.9) WPP family members contains an NE targeting domain. This domain, called the WPP domain after a highly conserved Trp-Pro-Pro motif, is necessary and sufficient for NE targeting of WPP1. RNAi suppression of WPP1 resulted in reduced mitotic activity.; WPP domain protein 1 (WPP1); BEST Arabidopsis thaliana protein match is: WPP domain protein 2 (TAIR:AT1G47200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative MAF1, Description = MFP1 attachment factor 1, PFAM = PF13943)' T '33.99' 'development.unspecified' 'nbv0.3scaffold91085_1-5265' '(at1g22160 : 86.7) Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT1G78020.1); Has 511 Blast hits to 511 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 511; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative , Description = , PFAM = PF04570)' T '33.99' 'development.unspecified' 'nbv0.3scaffold91200_2111-5248' '(at1g75520 : 206.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|68707 : 190.0) no description available & (reliability: 382.0) & (original description: Putative SRS7, Description = Protein SHI RELATED SEQUENCE 7, PFAM = PF05142)' T '33.99' 'development.unspecified' 'nbv0.3scaffold91431_1793-5212' '(at5g62310 : 251.0) Encodes a protein with a serine/threonine kinase domain. There are two other closely related members in Arabidopsis. Knock-out mutation results in incomplete root hair elongation. Expression is found all organs examined but is especially strong in elongating root hairs.; INCOMPLETE ROOT HAIR ELONGATION (IRE); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G17850.1); Has 126848 Blast hits to 125224 proteins in 4803 species: Archae - 165; Bacteria - 15038; Metazoa - 47504; Fungi - 12892; Plants - 29759; Viruses - 507; Other Eukaryotes - 20983 (source: NCBI BLink). & (gnl|cdd|35826 : 148.0) no description available & (reliability: 502.0) & (original description: Putative IRE, Description = Putative serine/threonine-protein kinase, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.3scaffold95652_1152-4605' '(at2g33430 : 294.0) differentiation and greening-like 1 (DAL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: plastid organization, endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA); LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT1G32580.1); Has 251 Blast hits to 228 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 251; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q38732|dag_antma : 130.0) DAG protein, chloroplast precursor - Antirrhinum majus (Garden snapdragon) & (reliability: 588.0) & (original description: Putative MORF2, Description = Multiple organellar RNA editing factor 2, chloroplastic, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.3scaffold97467_1-4359' '(at3g09090 : 150.0) Encodes DEX1 (defective in exine formation). Required for exine pattern formation during pollen development.; DEFECTIVE IN EXINE FORMATION 1 (DEX1); CONTAINS InterPro DOMAIN/s: FG-GAP (InterPro:IPR013517). & (reliability: 300.0) & (original description: Putative DEX1, Description = BnaA05g29250D protein, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.3scaffold99559_1037-4099' '(at3g20070 : 105.0) Encodes a plant-specific protein of unknown function. Mutant embryos contain at most four small cells. The endosperm nucleoli are enlarged. Gene is expressed in siliques based on EST information.; TITAN9 (TTN9); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy, endosperm development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative PGSC0003DMG400026385, Description = Titan9, putative, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.3scaffold101763_356-3823' '(p93340|gblp_nicpl : 624.0) Guanine nucleotide-binding protein subunit beta-like protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g18080 : 520.0) Encodes the Arabidopsis thaliana homolog of the tobacco WD-40 repeat ArcA gene.; ATARCA; FUNCTIONS IN: nucleotide binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosolic ribosome, chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B (TAIR:AT1G48630.1); Has 86693 Blast hits to 36128 proteins in 955 species: Archae - 98; Bacteria - 10140; Metazoa - 33986; Fungi - 19643; Plants - 11429; Viruses - 3; Other Eukaryotes - 11394 (source: NCBI BLink). & (gnl|cdd|35500 : 447.0) no description available & (gnl|cdd|29257 : 234.0) no description available & (reliability: 1040.0) & (original description: Putative ARCA, Description = Guanine nucleotide-binding protein subunit beta-like protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'nbv0.3scaffold104150_708-3447' '(at3g18060 : 340.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Nitrous oxide reductase, N-terminal (InterPro:IPR011045), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: nucleotide binding (TAIR:AT2G01330.2); Has 46825 Blast hits to 21434 proteins in 724 species: Archae - 58; Bacteria - 7760; Metazoa - 18076; Fungi - 9371; Plants - 5681; Viruses - 0; Other Eukaryotes - 5879 (source: NCBI BLink). & (gnl|cdd|35539 : 265.0) no description available & (gnl|cdd|29257 : 83.1) no description available & (reliability: 680.0) & (original description: Putative AIP1, Description = 66 kDa stress protein, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'nbv0.3scaffold107387_1-2962' '(at5g62850 : 297.0) Encodes a protein that is expressed in vegetative cells of pollen.; VEGETATIVE CELL EXPRESSED1 (AtVEX1); INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT3G28007.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36836 : 191.0) no description available & (reliability: 594.0) & (original description: Putative std1, Description = Bidirectional sugar transporter SWEET, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'nbv0.3scaffold125702_1-1858' '(at1g32580 : 107.0) plastid developmental protein DAG, putative; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT2G35240.1); Has 256 Blast hits to 233 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 256; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative DAL1, Description = BnaC04g11080D protein, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.3scaffold189794_1-560' '(at1g58250 : 172.0) SABRE, putative gene of unknown function, homologous to maize apt1 gene. Required for normal cell expansion in the root cortex. The sabre mutation results in abnormal cell expansion. Encodes a rare message; very low level of expression was detected in roots and shoots.; SABRE (SAB); CONTAINS InterPro DOMAIN/s: Protein of unknown function FMP27, domain-6, C-terminal (InterPro:IPR019443), Protein of unknown function FMP27, domain-4 (InterPro:IPR019441); BEST Arabidopsis thaliana protein match is: Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain (TAIR:AT5G49680.2). & (reliability: 344.0) & (original description: Putative HPS4, Description = Golgi-body localization protein, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.5scaffold5_1313729-1319532' '(at1g80350 : 639.0) encodes a p60 katanin protein that is expressed throughout the plant. Required for the specification of cell fates from early in development (in the meristem) through differentiation and for normal postmitotic organization of cortical microtubules into transverse arrays in root epidermis cells. Mutants display cytoskeletal defects.; ECTOPIC ROOT HAIR 3 (ERH3); FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: trichome branching, cortical microtubule organization, multidimensional cell growth, plant-type cell wall biogenesis, microtubule cytoskeleton organization; LOCATED IN: katanin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Vps4 oligomerisation, C-terminal (InterPro:IPR015415); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G34560.1); Has 31677 Blast hits to 29370 proteins in 3124 species: Archae - 1478; Bacteria - 12054; Metazoa - 4742; Fungi - 3292; Plants - 2928; Viruses - 23; Other Eukaryotes - 7160 (source: NCBI BLink). & (gnl|cdd|35957 : 490.0) no description available & (gnl|cdd|30812 : 192.0) no description available & (p54774|cdc48_soybn : 150.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 1278.0) & (original description: Putative AAA1, Description = Katanin p60 ATPase-containing subunit A1, PFAM = PF00004)' T '33.99' 'development.unspecified' 'nbv0.5scaffold9_1525576-1529376' '(at5g18270 : 270.0) Arabidopsis NAC domain containing protein 87 (ANAC087); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 46 (TAIR:AT3G04060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5cd17|nac77_orysa : 230.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (gnl|cdd|66085 : 207.0) no description available & (reliability: 540.0) & (original description: Putative NAC, Description = NAC protein, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.5scaffold18_798668-804105' '(at4g10350 : 349.0) NAC domain protein. SMB, BRN1, and BRN2 act to regulate root cap maturation, in a partially redundant fashion.BRN1 and BRN2, control the cell wall maturation processes that are required to detach root cap layers from the root.; NAC domain containing protein 70 (NAC070); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 15 (TAIR:AT1G33280.1); Has 2970 Blast hits to 2965 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2970; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q5z6b6|nac76_orysa : 244.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (gnl|cdd|66085 : 213.0) no description available & (reliability: 698.0) & (original description: Putative BRN2, Description = Protein BEARSKIN2, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.5scaffold21_896158-900529' '(at4g37790 : 171.0) Encodes homeobox protein HAT22, member of the HD-Zip II family.; HAT22; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, response to cytokinin stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein family (TAIR:AT2G22800.1); Has 6652 Blast hits to 6630 proteins in 455 species: Archae - 0; Bacteria - 0; Metazoa - 4237; Fungi - 277; Plants - 2018; Viruses - 3; Other Eukaryotes - 117 (source: NCBI BLink). & (gnl|cdd|35704 : 119.0) no description available & (reliability: 342.0) & (original description: Putative HAT2, Description = Homeobox associated leucine zipper protein, PFAM = PF02183;PF00046)' T '33.99' 'development.unspecified' 'nbv0.5scaffold52_715109-734033' '(at4g21150 : 701.0) HAPLESS 6 (HAP6); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: response to cold, protein amino acid terminal N-glycosylation; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribophorin II (InterPro:IPR008814). & (gnl|cdd|86956 : 634.0) no description available & (gnl|cdd|37658 : 231.0) no description available & (reliability: 1402.0) & (original description: Putative RPN2, Description = Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2, PFAM = PF05817)' T '33.99' 'development.unspecified' 'nbv0.5scaffold67_63470-66495' '(at5g01840 : 92.4) Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. Functions as a transcriptional repressor that suppresses cell elongation.; ovate family protein 1 (OFP1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: N-terminal protein myristoylation, regulation of unidimensional cell growth; LOCATED IN: nucleolus, cytoskeleton; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 3 (TAIR:AT5G58360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68419 : 87.2) no description available & (reliability: 180.2) & (original description: Putative OFP1, Description = Ovate family protein 1, PFAM = PF13724;PF04844)' T '33.99' 'development.unspecified' 'nbv0.5scaffold70_1033849-1363366' '(at1g29400 : 573.0) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices.; MEI2-like protein 5 (ML5); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like 3 (TAIR:AT4G18120.2); Has 6281 Blast hits to 5530 proteins in 358 species: Archae - 4; Bacteria - 106; Metazoa - 3185; Fungi - 1006; Plants - 1245; Viruses - 0; Other Eukaryotes - 735 (source: NCBI BLink). & (gnl|cdd|39859 : 281.0) no description available & (gnl|cdd|67666 : 190.0) no description available & (q27k34|pla2_orysa : 122.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (reliability: 1146.0) & (original description: Putative AML1, Description = MEI2-like protein 5, PFAM = PF04059;PF00076)' T '33.99' 'development.unspecified' 'nbv0.5scaffold95_1055695-1059805' '(at2g18060 : 418.0) Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.; vascular related NAC-domain protein 1 (VND1); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 76 (TAIR:AT4G36160.1); Has 3025 Blast hits to 3020 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3025; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q5z6b6|nac76_orysa : 248.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (gnl|cdd|66085 : 217.0) no description available & (reliability: 836.0) & (original description: Putative NAC037, Description = NAC domain-containing protein 37, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.5scaffold115_1100816-1105595' '(at4g32551 : 83.2) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (reliability: 166.4) & (original description: Putative , Description = , PFAM = PF08513)' T '33.99' 'development.unspecified' 'nbv0.5scaffold150_215529-476247' '(at3g48740 : 268.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: homolog of Medicago truncatula MTN3 (TAIR:AT5G23660.1); Has 1006 Blast hits to 953 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 236; Fungi - 0; Plants - 627; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|36836 : 226.0) no description available & (gnl|cdd|86234 : 92.5) no description available & (reliability: 536.0) & (original description: Putative SWEET12, Description = Bidirectional sugar transporter SWEET12, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'nbv0.5scaffold186_572257-576129' '(at1g12260 : 297.0) Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.; NAC 007 (NAC007); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: Arabidopsis NAC domain containing protein 26 (TAIR:AT1G62700.1); Has 3158 Blast hits to 3153 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 2; Plants - 3027; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (gnl|cdd|66085 : 207.0) no description available & (q5z6b6|nac76_orysa : 182.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (reliability: 594.0) & (original description: Putative nst1, Description = NAC domain-containing protein 7, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.5scaffold200_59457-62545' '(at3g15030 : 119.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 102.0) no description available & (reliability: 234.0) & (original description: Putative BRC1, Description = Transcription factor PCF8, PFAM = PF03634)' T '33.99' 'development.unspecified' 'nbv0.5scaffold210_152149-159396' '(at4g20370 : 187.0) Encodes a floral inducer that is a homolog of FT. Plants overexpressing this gene flower earlier than Col. Loss-of-function mutations flower later in short days. TSF and FT play overlapping roles in the promotion of flowering, with FT playing the dominant role.TSF sequences show extensive variation in different accessions and may contribute to quantitative variation in flowering time in these accessions. TSF has a complex pattern of spatial expression; it is expressed mainly in phloem and expression is regulated by daylength and vernalization.; TWIN SISTER OF FT (TSF); CONTAINS InterPro DOMAIN/s: Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); BEST Arabidopsis thaliana protein match is: PEBP (phosphatidylethanolamine-binding protein) family protein (TAIR:AT1G65480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9xh43|cet2_tobac : 158.0) CEN-like protein 2 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|38556 : 155.0) no description available & (gnl|cdd|29585 : 133.0) no description available & (reliability: 374.0) & (original description: Putative FT3, Description = Flowering locus T3, PFAM = PF01161)' T '33.99' 'development.unspecified' 'nbv0.5scaffold219_345752-350791' '(at3g28050 : 191.0) nodulin MtN21 /EamA-like transporter family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G40240.1); Has 1917 Blast hits to 1909 proteins in 293 species: Archae - 12; Bacteria - 576; Metazoa - 4; Fungi - 10; Plants - 1200; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative At3g28050, Description = WAT1-related protein At3g28050, PFAM = PF00892)' T '33.99' 'development.unspecified' 'nbv0.5scaffold243_278623-282370' '(p93340|gblp_nicpl : 551.0) Guanine nucleotide-binding protein subunit beta-like protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g18080 : 455.0) Encodes the Arabidopsis thaliana homolog of the tobacco WD-40 repeat ArcA gene.; ATARCA; FUNCTIONS IN: nucleotide binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosolic ribosome, chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B (TAIR:AT1G48630.1); Has 86693 Blast hits to 36128 proteins in 955 species: Archae - 98; Bacteria - 10140; Metazoa - 33986; Fungi - 19643; Plants - 11429; Viruses - 3; Other Eukaryotes - 11394 (source: NCBI BLink). & (gnl|cdd|35500 : 387.0) no description available & (gnl|cdd|29257 : 192.0) no description available & (reliability: 910.0) & (original description: Putative RACK1, Description = Receptor of-activated protein C kinase 1, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'nbv0.5scaffold270_797547-801484' '(at5g59450 : 483.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G46600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67150 : 314.0) no description available & (q69vg1|cigr1_orysa : 203.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (reliability: 966.0) & (original description: Putative SCL11, Description = Scarecrow-like protein 11, PFAM = PF03514)' T '33.99' 'development.unspecified' 'nbv0.5scaffold309_549713-562635' '(at1g04140 : 738.0) Transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT5G43930.3); Has 24502 Blast hits to 11850 proteins in 489 species: Archae - 64; Bacteria - 6127; Metazoa - 7778; Fungi - 5629; Plants - 2081; Viruses - 0; Other Eukaryotes - 2823 (source: NCBI BLink). & (gnl|cdd|35487 : 86.4) no description available & (gnl|cdd|29257 : 83.5) no description available & (reliability: 1476.0) & (original description: Putative Sb06g009200, Description = Putative uncharacterized protein Sb06g009200, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'nbv0.5scaffold312_485207-490781' '(at4g10850 : 195.0) Nodulin MtN3 family protein; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT1G66770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36836 : 182.0) no description available & (reliability: 390.0) & (original description: Putative LIM7, Description = Bidirectional sugar transporter SWEET, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'nbv0.5scaffold318_653145-664248' '(at2g38670 : 545.0) Encodes a mitochondrial ethanolamine-phosphate cytidylyltransferase, involved in phosphatidylethanolamine (PE) biosynthesis.; phosphorylethanolamine cytidylyltransferase 1 (PECT1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: phosphorylcholine cytidylyltransferase (TAIR:AT2G32260.1); Has 10984 Blast hits to 6001 proteins in 1666 species: Archae - 316; Bacteria - 5963; Metazoa - 682; Fungi - 448; Plants - 283; Viruses - 6; Other Eukaryotes - 3286 (source: NCBI BLink). & (gnl|cdd|38014 : 434.0) no description available & (gnl|cdd|28835 : 232.0) no description available & (reliability: 1090.0) & (original description: Putative pctA, Description = Ethanolamine-phosphate cytidylyltransferase, PFAM = PF01467;PF01467)' T '33.99' 'development.unspecified' 'nbv0.5scaffold337_267390-275140' '(at1g65480 : 263.0) FT, together with LFY, promotes flowering and is antagonistic with its homologous gene, TERMINAL FLOWER1 (TFL1). FT is expressed in leaves and is induced by long day treatment. Either the FT mRNA or protein is translocated to the shoot apex where it induces its own expression. Recent data suggests that FT protein acts as a long-range signal. FT is a target of CO and acts upstream of SOC1.; FLOWERING LOCUS T (FT); FUNCTIONS IN: phosphatidylethanolamine binding, protein binding; INVOLVED IN: photoperiodism, flowering, positive regulation of flower development, regulation of flower development; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); BEST Arabidopsis thaliana protein match is: PEBP (phosphatidylethanolamine-binding protein) family protein (TAIR:AT4G20370.1); Has 2182 Blast hits to 2182 proteins in 306 species: Archae - 0; Bacteria - 0; Metazoa - 594; Fungi - 140; Plants - 1404; Viruses - 3; Other Eukaryotes - 41 (source: NCBI BLink). & (q9xh43|cet2_tobac : 203.0) CEN-like protein 2 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|38556 : 191.0) no description available & (gnl|cdd|29585 : 175.0) no description available & (reliability: 526.0) & (original description: Putative FT, Description = Protein FLOWERING LOCUS T, PFAM = PF01161)' T '33.99' 'development.unspecified' 'nbv0.5scaffold341_6778-10467' '(gnl|cdd|68707 : 185.0) no description available & (at3g51060 : 181.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative LRP1, Description = BnaC01g31760D protein, PFAM = PF05142;PF05142)' T '33.99' 'development.unspecified' 'nbv0.5scaffold431_464811-474647' '(at2g03060 : 147.0) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL30 is expressed in pollen.It forms heterodimers with other MICK family members.; AGAMOUS-like 30 (AGL30); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: pollen development; LOCATED IN: nucleus; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 65 (TAIR:AT1G18750.1); Has 6155 Blast hits to 6155 proteins in 757 species: Archae - 0; Bacteria - 0; Metazoa - 616; Fungi - 313; Plants - 5146; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative Mads1, Description = MADS box protein, PFAM = PF00319)' T '33.99' 'development.unspecified' 'nbv0.5scaffold441_731959-735509' '(at5g62310 : 401.0) Encodes a protein with a serine/threonine kinase domain. There are two other closely related members in Arabidopsis. Knock-out mutation results in incomplete root hair elongation. Expression is found all organs examined but is especially strong in elongating root hairs.; INCOMPLETE ROOT HAIR ELONGATION (IRE); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G17850.1); Has 126848 Blast hits to 125224 proteins in 4803 species: Archae - 165; Bacteria - 15038; Metazoa - 47504; Fungi - 12892; Plants - 29759; Viruses - 507; Other Eukaryotes - 20983 (source: NCBI BLink). & (gnl|cdd|35826 : 249.0) no description available & (gnl|cdd|47550 : 170.0) no description available & (p15792|kpk1_phavu : 100.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 802.0) & (original description: Putative cek1, Description = AGC protein kinase, PFAM = PF00069)' T '33.99' 'development.unspecified' 'nbv0.5scaffold562_367827-370291' '(at5g65700 : 215.0) Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM2,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM1 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs.; BARELY ANY MERISTEM 1 (BAM1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT3G49670.1). & (gnl|cdd|36401 : 122.0) no description available & (p93194|rpk1_iponi : 92.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 420.0) & (original description: Putative har1, Description = Non-specific serine/threonine protein kinase, PFAM = PF00069)' T '33.99' 'development.unspecified' 'nbv0.5scaffold574_544496-569091' '(at3g02310 : 246.0) MADS-box protein, binds K domain of AG in vivo; SEPALLATA 2 (SEP2); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7363 Blast hits to 7362 proteins in 916 species: Archae - 3; Bacteria - 0; Metazoa - 630; Fungi - 305; Plants - 6350; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (q03489|agl9_pethy : 229.0) Agamous-like MADS-box protein AGL9 homolog (Floral homeotic protein FBP2) (Floral-binding protein 2) - Petunia hybrida (Petunia) & (gnl|cdd|29020 : 125.0) no description available & (gnl|cdd|35238 : 103.0) no description available & (reliability: 492.0) & (original description: Putative 37500, Description = Developmental protein SEPALLATA 2, PFAM = PF01486;PF00319)' T '33.99' 'development.unspecified' 'nbv0.5scaffold701_316903-322151' '(at4g37750 : 434.0) ANT is required for control of cell proliferation and encodes a putative transcriptional regulator similar to AP2. Loss of function alleles have reduced fertility, abnormal ovules and abnormal lateral organs. Expressed specifically in the chalaza and in floral organ primordia.; AINTEGUMENTA (ANT); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G72570.1); Has 7251 Blast hits to 5191 proteins in 264 species: Archae - 0; Bacteria - 9; Metazoa - 18; Fungi - 8; Plants - 7086; Viruses - 4; Other Eukaryotes - 126 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 336.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 96.9) no description available & (reliability: 868.0) & (original description: Putative ANT, Description = Aintegumenta, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'nbv0.5scaffold789_256312-259618' '(at4g17670 : 112.0) Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT5G47060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative BnaC01g10250D, Description = BnaC01g10250D protein, PFAM = PF04570)' T '33.99' 'development.unspecified' 'nbv0.5scaffold855_19486-26151' '(at3g13300 : 132.0) Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development.; VARICOSE (VCS); FUNCTIONS IN: protein homodimerization activity, nucleotide binding; INVOLVED IN: mRNA catabolic process, deadenylation-independent decapping of nuclear-transcribed mRNA, leaf morphogenesis; LOCATED IN: cytosol, nucleus, cytoplasmic mRNA processing body; EXPRESSED IN: whole plant, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: varicose-related (TAIR:AT3G13290.1); Has 885 Blast hits to 799 proteins in 264 species: Archae - 2; Bacteria - 218; Metazoa - 230; Fungi - 185; Plants - 114; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|37127 : 115.0) no description available & (reliability: 264.0) & (original description: Putative EDC4, Description = Enhancer of mRNA-decapping protein 4, PFAM = PF03478)' T '33.99' 'development.unspecified' 'nbv0.5scaffold963_156115-169552' '(at2g19520 : 579.0) Controls flowering.; FVE; FUNCTIONS IN: metal ion binding; INVOLVED IN: flower development, unidimensional cell growth, trichome morphogenesis, leaf morphogenesis; LOCATED IN: nucleolus, nucleus, CUL4 RING ubiquitin ligase complex, cytoplasm; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Histone-binding protein RBBP4 (InterPro:IPR022052), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: nucleosome/chromatin assembly factor group C5 (TAIR:AT4G29730.1); Has 27643 Blast hits to 19007 proteins in 669 species: Archae - 18; Bacteria - 3366; Metazoa - 11144; Fungi - 6221; Plants - 3473; Viruses - 0; Other Eukaryotes - 3421 (source: NCBI BLink). & (gnl|cdd|35485 : 266.0) no description available & (reliability: 1158.0) & (original description: Putative x1, Description = WD-40 repeat-containing protein MSI4, PFAM = PF12265;PF00400;PF00400)' T '33.99' 'development.unspecified' 'nbv0.5scaffold965_246255-261977' '(at3g18200 : 436.0) nodulin MtN21 /EamA-like transporter family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: Walls Are Thin 1 (TAIR:AT1G75500.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35917 : 144.0) no description available & (gnl|cdd|29062 : 140.0) no description available & (reliability: 872.0) & (original description: Putative nlp1, Description = WAT1-related protein, PFAM = PF00481;PF00892;PF00892)' T '33.99' 'development.unspecified' 'nbv0.5scaffold1004_503063-512113' '(at1g75900 : 406.0) GDSL-like Lipase/Acylhydrolase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G75880.2); Has 3444 Blast hits to 3405 proteins in 204 species: Archae - 0; Bacteria - 282; Metazoa - 0; Fungi - 26; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|58514 : 383.0) no description available & (p40603|apg_brana : 267.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 812.0) & (original description: Putative EXL3, Description = GDSL esterase/lipase EXL3, PFAM = PF00657)' T '33.99' 'development.unspecified' 'nbv0.5scaffold1031_407691-426104' '(at2g47410 : 1052.0) WD40/YVTN repeat-like-containing domain;Bromodomain; FUNCTIONS IN: nucleotide binding; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Bromodomain (InterPro:IPR001487), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD40/YVTN repeat-like-containing domain;Bromodomain (TAIR:AT5G49430.1). & (gnl|cdd|35863 : 408.0) no description available & (gnl|cdd|29257 : 179.0) no description available & (reliability: 2104.0) & (original description: Putative Sb03g005130, Description = Putative uncharacterized protein Sb03g005130, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'nbv0.5scaffold1062_265200-272669' '(at4g29230 : 421.0) NAC domain containing protein 75 (NAC075); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 99 (TAIR:AT5G56620.1); Has 3052 Blast hits to 2928 proteins in 176 species: Archae - 2; Bacteria - 22; Metazoa - 475; Fungi - 52; Plants - 2293; Viruses - 3; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|66085 : 135.0) no description available & (reliability: 842.0) & (original description: Putative NAC16, Description = NAC domain protein, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.5scaffold1073_325145-331972' '(at4g36920 : 352.0) Encodes a floral homeotic gene, a member of the AP2/EREBP (ethylene responsive element binding protein) class of transcription factors and is involved in the specification of floral organ identity, establishment of floral meristem identity, suppression of floral meristem indeterminancy, and development of the ovule and seed coat. AP2 also has a role in controlling seed mass. Dominant negative allele I28, revealed a function in meristem maintenance-mutant meristems are smaller than normal siblings. AP2 appears to act on the WUS-CLV pathway in an AG independent manner.; APETALA 2 (AP2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 3 (TAIR:AT5G67180.1). & (q8lsn2|bbm2_brana : 146.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (gnl|cdd|47695 : 91.1) no description available & (reliability: 704.0) & (original description: Putative lip2, Description = LIPLESS2, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'nbv0.5scaffold1076_149717-153062' '(gnl|cdd|68707 : 161.0) no description available & (at5g66350 : 157.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.; SHORT INTERNODES (SHI); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative SRS3, Description = Protein SHI RELATED SEQUENCE 3, PFAM = PF05142)' T '33.99' 'development.unspecified' 'nbv0.5scaffold1304_113231-219626' '(at4g32551 : 287.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (gnl|cdd|29257 : 170.0) no description available & (gnl|cdd|35493 : 125.0) no description available & (reliability: 574.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'nbv0.5scaffold1313_254465-262294' '(q9lly4|lpat1_brana : 162.0) 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplast precursor (EC 2.3.1.51) - Brassica napus (Rape) & (at4g30580 : 155.0) Encodes a plastidic lysophosphatidic acid acyltransferase (LPAAT). Is critical for chloroplasts phosphatidic acid biosynthesis. The null allele is embryo lethal.; ATS2; FUNCTIONS IN: 1-acylglycerol-3-phosphate O-acyltransferase activity, acyltransferase activity; INVOLVED IN: metabolic process, phosphatidylglycerol biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123), 1-acyl-sn-glycerol-3-phosphate acyltransferase (InterPro:IPR004552); BEST Arabidopsis thaliana protein match is: Phospholipid/glycerol acyltransferase family protein (TAIR:AT3G05510.1); Has 12571 Blast hits to 12571 proteins in 2517 species: Archae - 0; Bacteria - 9130; Metazoa - 376; Fungi - 153; Plants - 151; Viruses - 0; Other Eukaryotes - 2761 (source: NCBI BLink). & (gnl|cdd|38059 : 80.7) no description available & (reliability: 310.0) & (original description: Putative ATS2, Description = 1-acyl-sn-glycerol-3-phosphate acyltransferase, PFAM = PF01553)' T '33.99' 'development.unspecified' 'nbv0.5scaffold1318_209826-215819' '(at1g68170 : 220.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: embryo, leaf whorl, seed; EXPRESSED DURING: C globular stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G25270.1); Has 2511 Blast hits to 2498 proteins in 458 species: Archae - 10; Bacteria - 1084; Metazoa - 4; Fungi - 0; Plants - 1225; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative At1g68170, Description = WAT1-related protein At1g68170, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'nbv0.5scaffold1339_408852-411679' '(at2g36050 : 85.9) ovate family protein 15 (OFP15); LOCATED IN: chloroplast; EXPRESSED IN: sepal, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 18 (TAIR:AT3G52540.1); Has 245 Blast hits to 245 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 244; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative Sb05g003530, Description = Putative uncharacterized protein Sb05g003530, PFAM = PF04844)' T '33.99' 'development.unspecified' 'nbv0.5scaffold1417_102149-107598' '(at3g18400 : 276.0) NAC domain containing protein 58 (NAC058); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 38 (TAIR:AT2G24430.2); Has 3056 Blast hits to 3045 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3049; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (q5cd17|nac77_orysa : 212.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (gnl|cdd|66085 : 207.0) no description available & (reliability: 552.0) & (original description: Putative nac1, Description = Protein CUP-SHAPED COTYLEDON 2, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.5scaffold1421_195045-201598' '(at1g21460 : 242.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT5G53190.1); Has 988 Blast hits to 930 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 221; Fungi - 0; Plants - 643; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36836 : 165.0) no description available & (reliability: 484.0) & (original description: Putative SWEET2A, Description = Bidirectional sugar transporter SWEET2a, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'nbv0.5scaffold1421_249133-253859' '(at1g21460 : 255.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT5G53190.1); Has 988 Blast hits to 930 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 221; Fungi - 0; Plants - 643; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36836 : 164.0) no description available & (reliability: 510.0) & (original description: Putative SWEET1, Description = Bidirectional sugar transporter SWEET1, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'nbv0.5scaffold1439_271295-288516' '(at2g32950 : 979.0) Represses photomorphogenesis and induces skotomorphogenesis in the dark. Contains a ring finger zinc-binding motif, a coiled-coil domain, and several WD-40 repeats, similar to G-beta proteins. The C-terminus has homology to TAFII80, a subunit of the TFIID component of the RNA polymerase II of Drosophila. Nuclear localization in the dark and cytoplasmic in the light.; CONSTITUTIVE PHOTOMORPHOGENIC 1 (COP1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA1-related 2 (TAIR:AT4G11110.1); Has 42218 Blast hits to 27649 proteins in 756 species: Archae - 30; Bacteria - 4454; Metazoa - 17716; Fungi - 8958; Plants - 5306; Viruses - 46; Other Eukaryotes - 5708 (source: NCBI BLink). & (p93471|cop1_pea : 937.0) E3 ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive photomorphogenesis protein 1) - Pisum sativum (Garden pea) & (gnl|cdd|29257 : 101.0) no description available & (gnl|cdd|35518 : 84.7) no description available & (reliability: 1958.0) & (original description: Putative COP1, Description = E3 ubiquitin-protein ligase COP1, PFAM = PF13923;PF00400)' T '33.99' 'development.unspecified' 'nbv0.5scaffold1463_152915-448225' '(q7y1x1|est_hevbr : 88.2) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (at5g14450 : 87.8) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G26430.1); Has 3217 Blast hits to 3179 proteins in 111 species: Archae - 0; Bacteria - 82; Metazoa - 0; Fungi - 14; Plants - 3119; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative At3g27950, Description = GDSL esterase/lipase, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.5scaffold1470_22808-26095' '(at2g22800 : 212.0) Encodes homeobox protein HAT9.; HAT9; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein family (TAIR:AT4G37790.1); Has 6755 Blast hits to 6732 proteins in 464 species: Archae - 0; Bacteria - 0; Metazoa - 4333; Fungi - 266; Plants - 2037; Viruses - 7; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|35704 : 135.0) no description available & (reliability: 414.0) & (original description: Putative HAT9, Description = Homeobox-leucine zipper protein HAT9, PFAM = PF02183;PF00046)' T '33.99' 'development.unspecified' 'nbv0.5scaffold1473_349077-352860' '(gnl|cdd|36401 : 345.0) no description available & (at1g52540 : 326.0) Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G15890.1); Has 98543 Blast hits to 97377 proteins in 3831 species: Archae - 68; Bacteria - 11032; Metazoa - 36701; Fungi - 6941; Plants - 30133; Viruses - 293; Other Eukaryotes - 13375 (source: NCBI BLink). & (q8lkz1|nork_pea : 235.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 161.0) no description available & (reliability: 652.0) & (original description: Putative Os09g0531701, Description = Os09g0531701 protein, PFAM = PF00069)' T '33.99' 'development.unspecified' 'nbv0.5scaffold1489_115615-126517' '(at4g09960 : 233.0) a MADS box transcription factor expressed in the carpel and ovules; SEEDSTICK (STK); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, ovule development, carpel development; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT2G42830.2). & (q40872|ag_pangi : 226.0) Floral homeotic protein AGAMOUS (GAG2) - Panax ginseng (Korean ginseng) & (gnl|cdd|29020 : 126.0) no description available & (gnl|cdd|35238 : 93.5) no description available & (reliability: 436.0) & (original description: Putative AGL11, Description = Agamous-like MADS-box protein AGL11, PFAM = PF01486;PF00319)' T '33.99' 'development.unspecified' 'nbv0.5scaffold1601_224500-227924' '(at5g43810 : 184.0) Encodes a member of the EIF2C (elongation initiation factor 2c)/ Argonaute class of proteins. Required to establish the central-peripheral organization of the embryo apex. Along with WUS and CLV genes, controls the relative organization of central zone and peripheral zone cells in meristems. Acts in embryonic provascular tissue potentiating WUSCHEL function during meristem development in the embryo.; ZWILLE (ZLL); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT1G48410.1). & (gnl|cdd|72942 : 161.0) no description available & (gnl|cdd|36259 : 141.0) no description available & (reliability: 362.0) & (original description: Putative ago2, Description = Protein argonaute 1A, PFAM = PF02171)' T '33.99' 'development.unspecified' 'nbv0.5scaffold1614_72713-81544' '(at2g22540 : 206.0) Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter.; SHORT VEGETATIVE PHASE (SVP); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 24 (TAIR:AT4G24540.1); Has 7281 Blast hits to 7260 proteins in 901 species: Archae - 3; Bacteria - 13; Metazoa - 824; Fungi - 296; Plants - 6010; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (q9xj66|mad22_orysa : 184.0) MADS-box transcription factor 22 (OsMADS22) - Oryza sativa (Rice) & (gnl|cdd|29020 : 119.0) no description available & (gnl|cdd|35238 : 88.9) no description available & (reliability: 412.0) & (original description: Putative AGL24, Description = MADS-box protein AGL24, PFAM = PF00319;PF01486)' T '33.99' 'development.unspecified' 'nbv0.5scaffold1645_289342-292646' '(at4g18830 : 107.0) Member of the ovate protein family.Interacts with BLH1 and KNAT3. Regulates the subcellular localization of BLH1.; ovate family protein 5 (OFP5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 4 (TAIR:AT1G06920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68419 : 83.8) no description available & (reliability: 214.0) & (original description: Putative OFP1, Description = Ovate transcriptional repressor, PFAM = PF04844)' T '33.99' 'development.unspecified' 'nbv0.5scaffold1725_92395-195289' '(at5g07050 : 435.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT2G40900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 870.0) & (original description: Putative nlp1, Description = WAT1-related protein, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'nbv0.5scaffold1742_3031-8397' '(at4g36860 : 207.0) LIM domain-containing protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Ubiquitin interacting motif (InterPro:IPR003903), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: DA1 (TAIR:AT1G19270.1); Has 6004 Blast hits to 4271 proteins in 323 species: Archae - 7; Bacteria - 228; Metazoa - 4096; Fungi - 190; Plants - 320; Viruses - 67; Other Eukaryotes - 1096 (source: NCBI BLink). & (gnl|cdd|36916 : 86.4) no description available & (reliability: 414.0) & (original description: Putative , Description = , PFAM = PF12315)' T '33.99' 'development.unspecified' 'nbv0.5scaffold1757_359249-369204' '(at5g22380 : 223.0) NAC domain containing protein 90 (NAC090); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 61 (TAIR:AT3G44350.2); Has 2731 Blast hits to 2726 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2731; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 143.0) no description available & (q53nf7|nac71_orysa : 114.0) NAC domain-containing protein 71 (ONAC071) - Oryza sativa (Rice) & (reliability: 446.0) & (original description: Putative NAC090, Description = NAC domain-containing protein 90, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.5scaffold1827_1440-61996' '(at5g18410 : 2110.0) distorted trichomes and exhibits a diffuse actin cytoskeleton; PIROGI 121 (PIR121); FUNCTIONS IN: transcription activator activity; INVOLVED IN: actin nucleation, trichome morphogenesis, actin cytoskeleton organization; LOCATED IN: SCAR complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytoplasmic FMR1-interacting (InterPro:IPR008081); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69514 : 586.0) no description available & (gnl|cdd|38742 : 580.0) no description available & (reliability: 4220.0) & (original description: Putative KLK, Description = Protein PIR, PFAM = PF05994;PF07159)' T '33.99' 'development.unspecified' 'nbv0.5scaffold1849_28904-52712' '(gnl|cdd|68610 : 249.0) no description available & (at1g70680 : 229.0) Caleosin-related family protein; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: Caleosin-related family protein (TAIR:AT1G70670.1); Has 342 Blast hits to 337 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 281; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative PXG4, Description = Probable peroxygenase 4, PFAM = PF05042)' T '33.99' 'development.unspecified' 'nbv0.5scaffold1873_77282-94301' '(at4g19185 : 439.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G45370.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 798.0) & (original description: Putative At4g19185, Description = WAT1-related protein At4g19185, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'nbv0.5scaffold2008_374831-377622' '(q7f2l3|nac48_orysa : 135.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (at1g77450 : 134.0) NAC domain containing protein 32 (NAC032); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT1G01720.1); Has 3015 Blast hits to 3009 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3015; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 108.0) no description available & (reliability: 268.0) & (original description: Putative ATAF, Description = NAC transcription factor, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.5scaffold2070_152630-160456' '(at1g48380 : 266.0) Encodes a novel nuclear protein required for root hair initiation and ploidy-dependent cell growth. Its sequence has similarity to the C-terminal domain of mammalian DNA topo IIalpha. Shows in vitro DNA binding activity and is likely to be part of the topo VI complex by binding to subunit A.; ROOT HAIRLESS 1 (RHL1); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: root hair initiation, DNA endoreduplication; LOCATED IN: nucleolus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 532.0) & (original description: Putative RHL1, Description = DNA-binding protein RHL1-like protein, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.5scaffold2070_153243-160389' '(at1g48380 : 267.0) Encodes a novel nuclear protein required for root hair initiation and ploidy-dependent cell growth. Its sequence has similarity to the C-terminal domain of mammalian DNA topo IIalpha. Shows in vitro DNA binding activity and is likely to be part of the topo VI complex by binding to subunit A.; ROOT HAIRLESS 1 (RHL1); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: root hair initiation, DNA endoreduplication; LOCATED IN: nucleolus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 534.0) & (original description: Putative RHL1, Description = DNA-binding protein RHL1, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.5scaffold2090_34411-50459' '(q40700|mads1_orysa : 122.0) MADS-box transcription factor 1 (OsMADS1) (Protein LEAFY HULL STERILE1) (Protein SEPALLATA-like) - Oryza sativa (Rice) & (at5g65050 : 117.0) Originally published as Agamous like MADS-box protein AGL31. One of a group of MADS box genes involved in control of flowering time. Four variant sequences have been identified for this locus but have not been characterized for differences in expression pattern and/or function.; AGAMOUS-like 31 (AGL31); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G65060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29020 : 112.0) no description available & (gnl|cdd|35238 : 87.4) no description available & (reliability: 220.0) & (original description: Putative C11, Description = FLC, PFAM = PF00319;PF01486)' T '33.99' 'development.unspecified' 'nbv0.5scaffold2115_184095-188171' '(at4g20370 : 202.0) Encodes a floral inducer that is a homolog of FT. Plants overexpressing this gene flower earlier than Col. Loss-of-function mutations flower later in short days. TSF and FT play overlapping roles in the promotion of flowering, with FT playing the dominant role.TSF sequences show extensive variation in different accessions and may contribute to quantitative variation in flowering time in these accessions. TSF has a complex pattern of spatial expression; it is expressed mainly in phloem and expression is regulated by daylength and vernalization.; TWIN SISTER OF FT (TSF); CONTAINS InterPro DOMAIN/s: Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); BEST Arabidopsis thaliana protein match is: PEBP (phosphatidylethanolamine-binding protein) family protein (TAIR:AT1G65480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38556 : 144.0) no description available & (q9xh43|cet2_tobac : 142.0) CEN-like protein 2 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29585 : 124.0) no description available & (reliability: 404.0) & (original description: Putative SP6A, Description = SP6A, PFAM = PF01161)' T '33.99' 'development.unspecified' 'nbv0.5scaffold2166_308819-319634' '(at3g58040 : 463.0) Encodes a RING finger domain containing protein that interacts with AtRAP2.2.; seven in absentia of Arabidopsis 2 (SINAT2); FUNCTIONS IN: protein binding; INVOLVED IN: multicellular organismal development, protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Seven-in-absentia protein, TRAF-like domain (InterPro:IPR018121), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, SIAH-type (InterPro:IPR013010), Seven In Absentia Homolog-type (InterPro:IPR013323), Seven-in-absentia protein, sina (InterPro:IPR004162), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT2G41980.1); Has 1862 Blast hits to 1847 proteins in 701 species: Archae - 0; Bacteria - 0; Metazoa - 1276; Fungi - 4; Plants - 482; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink). & (gnl|cdd|38212 : 286.0) no description available & (gnl|cdd|86255 : 250.0) no description available & (q8t3y0|sinal_drome : 164.0) Probable E3 ubiquitin-protein ligase sina-like CG13030 (EC 6.3.2.-) - Drosophila melanogaster (Fruit fly) & (reliability: 926.0) & (original description: Putative SINAT2, Description = E3 ubiquitin-protein ligase SINAT2, PFAM = PF03145)' T '33.99' 'development.unspecified' 'nbv0.5scaffold2362_200428-205131' '(at4g33270 : 586.0) putative cdc20 protein (CDC20.1); CDC20.1; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT4G33260.1); Has 49595 Blast hits to 24757 proteins in 709 species: Archae - 60; Bacteria - 7548; Metazoa - 19325; Fungi - 10981; Plants - 5978; Viruses - 0; Other Eukaryotes - 5703 (source: NCBI BLink). & (gnl|cdd|35526 : 435.0) no description available & (gnl|cdd|29257 : 145.0) no description available & (reliability: 1144.0) & (original description: Putative fzy, Description = Cell division cycle protein 20, PFAM = PF12894;PF00400;PF00400)' T '33.99' 'development.unspecified' 'nbv0.5scaffold2388_126853-132362' '(at3g06430 : 632.0) embryo defective 2750 (EMB2750); INVOLVED IN: pollen tube development, embryo development ending in seed dormancy; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G53170.1); Has 31867 Blast hits to 12007 proteins in 283 species: Archae - 3; Bacteria - 31; Metazoa - 288; Fungi - 376; Plants - 30037; Viruses - 0; Other Eukaryotes - 1132 (source: NCBI BLink). & (q76c99|rf1_orysa : 100.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1264.0) & (original description: Putative ppr2, Description = PPR2, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535;PF01535)' T '33.99' 'development.unspecified' 'nbv0.5scaffold2603_51361-58671' '(gnl|cdd|68707 : 164.0) no description available & (at1g75520 : 156.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative LRP1, Description = BnaC01g31760D protein, PFAM = PF05142)' T '33.99' 'development.unspecified' 'nbv0.5scaffold2643_87006-111866' '(at1g13120 : 338.0) embryo defective 1745 (emb1745); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nuclear pore; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GLE1-like (InterPro:IPR012476); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05523.1); Has 36705 Blast hits to 24548 proteins in 2114 species: Archae - 242; Bacteria - 8583; Metazoa - 12421; Fungi - 3107; Plants - 1525; Viruses - 221; Other Eukaryotes - 10606 (source: NCBI BLink). & (gnl|cdd|37623 : 219.0) no description available & (gnl|cdd|87377 : 158.0) no description available & (reliability: 676.0) & (original description: Putative PGSC0003DMG400016968, Description = Nucleoporin GLE1, PFAM = PF07817)' T '33.99' 'development.unspecified' 'nbv0.5scaffold2643_106098-111399' '(at1g13120 : 114.0) embryo defective 1745 (emb1745); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nuclear pore; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GLE1-like (InterPro:IPR012476); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05523.1); Has 36705 Blast hits to 24548 proteins in 2114 species: Archae - 242; Bacteria - 8583; Metazoa - 12421; Fungi - 3107; Plants - 1525; Viruses - 221; Other Eukaryotes - 10606 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative GLE1, Description = GLE1-like protein, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.5scaffold2650_6819-121270' '(at4g00730 : 637.0) Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development; ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29139 : 174.0) no description available & (reliability: 1248.0) & (original description: Putative ANL2, Description = Homeobox-leucine zipper protein ANTHOCYANINLESS 2, PFAM = PF00046;PF01852)' T '33.99' 'development.unspecified' 'nbv0.5scaffold3046_61414-65923' '(at1g78130 : 627.0) unfertilized embryo sac 2 (UNE2); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G10190.1); Has 16910 Blast hits to 16851 proteins in 2099 species: Archae - 450; Bacteria - 14339; Metazoa - 386; Fungi - 319; Plants - 340; Viruses - 3; Other Eukaryotes - 1073 (source: NCBI BLink). & (gnl|cdd|36544 : 429.0) no description available & (gnl|cdd|87335 : 103.0) no description available & (reliability: 1254.0) & (original description: Putative At5g10190, Description = Major facilitator protein, PFAM = PF07690)' T '33.99' 'development.unspecified' 'nbv0.5scaffold3063_119093-122868' '(at4g10850 : 185.0) Nodulin MtN3 family protein; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT1G66770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36836 : 180.0) no description available & (gnl|cdd|86234 : 81.7) no description available & (reliability: 370.0) & (original description: Putative std1, Description = Bidirectional sugar transporter SWEET, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'nbv0.5scaffold3064_120823-196762' '(at3g11980 : 442.0) Similar to fatty acid reductases.; MALE STERILITY 2 (MS2); FUNCTIONS IN: fatty-acyl-CoA reductase (alcohol-forming) activity, oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor; INVOLVED IN: microsporogenesis, pollen exine formation; LOCATED IN: chloroplast; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Male sterility (InterPro:IPR004262), NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 6 (TAIR:AT3G56700.1); Has 2390 Blast hits to 2358 proteins in 427 species: Archae - 4; Bacteria - 606; Metazoa - 985; Fungi - 290; Plants - 282; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (gnl|cdd|36435 : 373.0) no description available & (gnl|cdd|87425 : 228.0) no description available & (reliability: 884.0) & (original description: Putative ms2, Description = Male sterility protein 2, PFAM = PF03015;PF07993)' T '33.99' 'development.unspecified' 'nbv0.5scaffold3073_186818-191436' '(at5g58360 : 97.4) ovate family protein 3 (OFP3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 4 (TAIR:AT1G06920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68419 : 86.5) no description available & (reliability: 194.8) & (original description: Putative OFP1, Description = Ovate transcriptional repressor, PFAM = PF04844;PF13724)' T '33.99' 'development.unspecified' 'nbv0.5scaffold3093_30784-36106' '(at5g51230 : 152.0) Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Forms a complex with FIE, CLF, and MSI1. This complex modulates the expression of target genes including AG, PI and AP3.; EMBRYONIC FLOWER 2 (EMF2); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Polycomb protein, VEFS-Box (InterPro:IPR019135); BEST Arabidopsis thaliana protein match is: VEFS-Box of polycomb protein (TAIR:AT4G16845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative EMF2, Description = Polycomb group protein EMBRYONIC FLOWER 2, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.5scaffold3095_4478-8205' '(at3g48740 : 238.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: homolog of Medicago truncatula MTN3 (TAIR:AT5G23660.1); Has 1006 Blast hits to 953 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 236; Fungi - 0; Plants - 627; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|36836 : 205.0) no description available & (gnl|cdd|86234 : 92.9) no description available & (reliability: 476.0) & (original description: Putative MTN3, Description = Bidirectional sugar transporter SWEET, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'nbv0.5scaffold3164_17232-29057' '(gnl|cdd|68610 : 249.0) no description available & (at1g70680 : 230.0) Caleosin-related family protein; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: Caleosin-related family protein (TAIR:AT1G70670.1); Has 342 Blast hits to 337 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 281; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative PXG5, Description = Probable peroxygenase 5, PFAM = PF05042)' T '33.99' 'development.unspecified' 'nbv0.5scaffold3290_45492-49009' '(q5ne24|nsp2_medtr : 558.0) Nodulation signaling pathway 2 protein - Medicago truncatula (Barrel medic) & (at4g08250 : 429.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2377 Blast hits to 2344 proteins in 299 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2375; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 273.0) no description available & (reliability: 858.0) & (original description: Putative NSP2, Description = Nodulation-signaling pathway 2 protein, PFAM = PF03514)' T '33.99' 'development.unspecified' 'nbv0.5scaffold3299_248181-255669' '(at4g32551 : 287.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (gnl|cdd|29257 : 145.0) no description available & (gnl|cdd|35487 : 117.0) no description available & (reliability: 574.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'nbv0.5scaffold3299_250669-260289' '(at2g32700 : 148.0) Encodes a WD40 repeat and LUFS domain containing protein that is similar to LUG. Interacts physically with SEUSS and likely functions as part of a repressor complex that represses AG.; LEUNIG_homolog (LUH); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: flower development, negative regulation of transcription, embryo development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LisH dimerisation motif;WD40/YVTN repeat-like-containing domain (TAIR:AT4G32551.1). & (gnl|cdd|29257 : 91.6) no description available & (reliability: 274.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'nbv0.5scaffold3311_200933-207147' '(at1g29400 : 684.0) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices.; MEI2-like protein 5 (ML5); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like 3 (TAIR:AT4G18120.2); Has 6281 Blast hits to 5530 proteins in 358 species: Archae - 4; Bacteria - 106; Metazoa - 3185; Fungi - 1006; Plants - 1245; Viruses - 0; Other Eukaryotes - 735 (source: NCBI BLink). & (gnl|cdd|39859 : 351.0) no description available & (gnl|cdd|67666 : 191.0) no description available & (q27k34|pla2_orysa : 124.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (reliability: 1368.0) & (original description: Putative ML2, Description = Protein MEI2-like 2, PFAM = PF04059;PF00076;PF00076)' T '33.99' 'development.unspecified' 'nbv0.5scaffold3448_5528-13086' '(at5g37930 : 176.0) Protein with RING/U-box and TRAF-like domains; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: multicellular organismal development, ubiquitin-dependent protein catabolic process, protein ubiquitination; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), TRAF-like (InterPro:IPR008974), Seven-in-absentia protein, TRAF-like domain (InterPro:IPR018121), Zinc finger, SIAH-type (InterPro:IPR013010), Seven In Absentia Homolog-type (InterPro:IPR013323), Seven-in-absentia protein, sina (InterPro:IPR004162); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT1G66650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38212 : 158.0) no description available & (reliability: 352.0) & (original description: Putative PGSC0003DMG402016693, Description = E3 ubiquitin-protein ligase, PFAM = PF03145)' T '33.99' 'development.unspecified' 'nbv0.5scaffold3524_82925-86523' '(at5g20480 : 150.0) Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.; EF-TU receptor (EFR); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47090.1); Has 211073 Blast hits to 132033 proteins in 4602 species: Archae - 167; Bacteria - 19808; Metazoa - 69159; Fungi - 9873; Plants - 87247; Viruses - 333; Other Eukaryotes - 24486 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 132.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|35665 : 91.6) no description available & (reliability: 280.0) & (original description: Putative PGSC0003DMG400007611, Description = Non-specific serine/threonine protein kinase, PFAM = PF08263;PF13855;PF13855)' T '33.99' 'development.unspecified' 'nbv0.5scaffold3678_159671-167230' '(at5g22370 : 333.0) Encodes QQT1. Required for early embryo development. qqt1 mutant lines are embryo-defective. Participates in the organization of microtubules during cell division. Interacts with QQT2 (encoded by AT4G21800).; QUATRE-QUART 1 (QQT1); FUNCTIONS IN: nucleotide binding, ATP binding; INVOLVED IN: embryo development, cell division, embryo development ending in seed dormancy; LOCATED IN: microtubule; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function, ATP binding (InterPro:IPR004130); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G12790.5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36746 : 273.0) no description available & (gnl|cdd|86218 : 125.0) no description available & (reliability: 666.0) & (original description: Putative gpn2, Description = ATP-binding domain 1 family member B, PFAM = PF03029)' T '33.99' 'development.unspecified' 'nbv0.5scaffold3736_42218-51422' '(at1g04770 : 313.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G48850.1); Has 226 Blast hits to 224 proteins in 29 species: Archae - 0; Bacteria - 22; Metazoa - 1; Fungi - 0; Plants - 173; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 626.0) & (original description: Putative At1g04770, Description = Protein SULFUR DEFICIENCY-INDUCED 2, PFAM = PF07719)' T '33.99' 'development.unspecified' 'nbv0.5scaffold3878_48591-52802' '(at1g12060 : 174.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 5 (BAG5); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 6 (TAIR:AT2G46240.1); Has 84 Blast hits to 84 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative BAG5, Description = BAG family molecular chaperone regulator 5, mitochondrial, PFAM = PF02179)' T '33.99' 'development.unspecified' 'nbv0.5scaffold3955_198343-211343' '(at1g80350 : 481.0) encodes a p60 katanin protein that is expressed throughout the plant. Required for the specification of cell fates from early in development (in the meristem) through differentiation and for normal postmitotic organization of cortical microtubules into transverse arrays in root epidermis cells. Mutants display cytoskeletal defects.; ECTOPIC ROOT HAIR 3 (ERH3); FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: trichome branching, cortical microtubule organization, multidimensional cell growth, plant-type cell wall biogenesis, microtubule cytoskeleton organization; LOCATED IN: katanin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Vps4 oligomerisation, C-terminal (InterPro:IPR015415); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G34560.1); Has 31677 Blast hits to 29370 proteins in 3124 species: Archae - 1478; Bacteria - 12054; Metazoa - 4742; Fungi - 3292; Plants - 2928; Viruses - 23; Other Eukaryotes - 7160 (source: NCBI BLink). & (gnl|cdd|35957 : 469.0) no description available & (gnl|cdd|30812 : 242.0) no description available & (q96372|cdc48_capan : 193.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 962.0) & (original description: Putative KATL1, Description = Katanin p60 ATPase-containing subunit A-like 1, PFAM = PF09336;PF00004)' T '33.99' 'development.unspecified' 'nbv0.5scaffold4000_160399-171795' '(at1g09380 : 89.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G07050.1); Has 5897 Blast hits to 5875 proteins in 1081 species: Archae - 84; Bacteria - 3492; Metazoa - 6; Fungi - 4; Plants - 1243; Viruses - 0; Other Eukaryotes - 1068 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative wat1, Description = WAT1-related protein, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.5scaffold4099_43725-49131' '(at5g43822 : 182.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative OSJNBa0057L21.18, Description = Os10g0566900 protein, PFAM = PF15011)' T '33.99' 'development.unspecified' 'nbv0.5scaffold4175_133267-137113' '(at1g18100 : 140.0) Encodes a member of the FT and TFL1 family of phosphatidylethanolamine-binding proteins. It is expressed in seeds and up-regulated in response to ABA. Loss of function mutants show decreased rate of germination in the presence of ABA. ABA dependent regulation is mediated by both ABI3 and ABI5. ABI5 promotes MFT expression, primarily in the radicle-hypocotyl transition zone and ABI3 suppresses it in the seed.; E12A11; CONTAINS InterPro DOMAIN/s: Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); BEST Arabidopsis thaliana protein match is: PEBP (phosphatidylethanolamine-binding protein) family protein (TAIR:AT5G03840.1); Has 2417 Blast hits to 2417 proteins in 371 species: Archae - 0; Bacteria - 118; Metazoa - 639; Fungi - 192; Plants - 1429; Viruses - 3; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|38556 : 138.0) no description available & (q9xh44|cet1_tobac : 125.0) CEN-like protein 1 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29585 : 118.0) no description available & (reliability: 280.0) & (original description: Putative ATC, Description = Flowering locus T, PFAM = PF01161)' T '33.99' 'development.unspecified' 'nbv0.5scaffold4224_62260-92932' '(at1g55540 : 300.0) embryo defective 1011 (emb1011); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 600.0) & (original description: Putative Sb01g042703, Description = Putative uncharacterized protein Sb01g042703, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.5scaffold4345_173695-190260' '(at1g79840 : 834.0) Glabra 2, a homeodomain protein affects epidermal cell identity including trichomes, root hairs, and seed coat. It also down-regulates seed oil content. Expressed in atrichoblasts and required to suppress root hair development. Also expressed abundantly during early seed development. Directly regulated by WER.; GLABRA 2 (GL2); CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: protodermal factor 2 (TAIR:AT4G04890.1). & (gnl|cdd|29139 : 168.0) no description available & (reliability: 1668.0) & (original description: Putative GL2, Description = Homeobox-leucine zipper protein GLABRA 2, PFAM = PF00046;PF01852)' T '33.99' 'development.unspecified' 'nbv0.5scaffold4368_179979-184069' '(gnl|cdd|71337 : 175.0) no description available & (at4g00650 : 114.0) Encodes a major determinant of natural variation in Arabidopsis flowering time. Dominant alleles of FRI confer a vernalization requirement causing plants to overwinter vegetatively. Many early flowering accessions carry loss-of-function fri alleles .Twenty distinct haplotypes that contain non-functional FRI alleles have been identified and the distribution analyzed in over 190 accessions. The common lab strains- Col and Ler each carry loss of function mutations in FRI.; FRIGIDA (FRI); CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT5G48385.1); Has 841 Blast hits to 841 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 841; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative PGSC0003DMG400031150, Description = Putative ovule protein, PFAM = PF07899)' T '33.99' 'development.unspecified' 'nbv0.5scaffold4377_182250-196720' '(at3g08850 : 1511.0) Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive.; RAPTOR1; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), WD40 repeat (InterPro:IPR001680), Regulatory associated protein of TOR (InterPro:IPR004083), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: HEAT repeat ;WD domain, G-beta repeat protein protein (TAIR:AT5G01770.1); Has 7799 Blast hits to 6065 proteins in 379 species: Archae - 2; Bacteria - 1590; Metazoa - 2741; Fungi - 1618; Plants - 862; Viruses - 0; Other Eukaryotes - 986 (source: NCBI BLink). & (gnl|cdd|36730 : 1289.0) no description available & (reliability: 3022.0) & (original description: Putative RAPTOR1, Description = Regulatory-associated protein of TOR 1, PFAM = PF14538)' T '33.99' 'development.unspecified' 'nbv0.5scaffold4389_46301-50138' '(at1g12260 : 305.0) Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.; NAC 007 (NAC007); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: Arabidopsis NAC domain containing protein 26 (TAIR:AT1G62700.1); Has 3158 Blast hits to 3153 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 2; Plants - 3027; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (q5z6b6|nac76_orysa : 216.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (gnl|cdd|66085 : 213.0) no description available & (reliability: 610.0) & (original description: Putative NAC007, Description = NAC domain-containing protein 7, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.5scaffold4668_10605-26518' '(at5g17440 : 410.0) LUC7 related protein; CONTAINS InterPro DOMAIN/s: LUC7 related (InterPro:IPR004882); BEST Arabidopsis thaliana protein match is: LUC7 related protein (TAIR:AT3G03340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36015 : 196.0) no description available & (gnl|cdd|66842 : 192.0) no description available & (reliability: 778.0) & (original description: Putative UNE6, Description = LUC7 related protein, PFAM = PF03194;PF03194)' T '33.99' 'development.unspecified' 'nbv0.5scaffold4683_97170-104422' '(at5g10510 : 422.0) Encodes an AP2-domain transcription factor involved in root stem cell identity and root development.; AINTEGUMENTA-like 6 (AIL6); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: AINTEGUMENTA-like 7 (TAIR:AT5G65510.1). & (q8l3u3|bbm1_brana : 315.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 91.8) no description available & (reliability: 844.0) & (original description: Putative AIL6, Description = AP2-like ethylene-responsive transcription factor AIL6, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'nbv0.5scaffold4736_76563-80465' '(at2g39210 : 753.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G28120.1); Has 3072 Blast hits to 2927 proteins in 685 species: Archae - 32; Bacteria - 1223; Metazoa - 36; Fungi - 288; Plants - 601; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink). & (gnl|cdd|70288 : 303.0) no description available & (reliability: 1506.0) & (original description: Putative At2g39210, Description = At2g39210/T16B24.15, PFAM = PF07690;PF06813)' T '33.99' 'development.unspecified' 'nbv0.5scaffold4763_139473-151722' '(at1g04140 : 743.0) Transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT5G43930.3); Has 24502 Blast hits to 11850 proteins in 489 species: Archae - 64; Bacteria - 6127; Metazoa - 7778; Fungi - 5629; Plants - 2081; Viruses - 0; Other Eukaryotes - 2823 (source: NCBI BLink). & (gnl|cdd|35487 : 87.6) no description available & (gnl|cdd|29257 : 83.1) no description available & (reliability: 1486.0) & (original description: Putative BnaA09g50670D, Description = BnaA09g50670D protein, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'nbv0.5scaffold4878_317916-330605' '(at4g00090 : 556.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: periodic tryptophan protein 2 (TAIR:AT1G15440.2); Has 19942 Blast hits to 11235 proteins in 520 species: Archae - 42; Bacteria - 5638; Metazoa - 5982; Fungi - 4099; Plants - 1742; Viruses - 0; Other Eukaryotes - 2439 (source: NCBI BLink). & (gnl|cdd|37307 : 414.0) no description available & (gnl|cdd|29257 : 97.8) no description available & (reliability: 1112.0) & (original description: Putative At4g00090, Description = AT4g00090/F6N15_8, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'nbv0.5scaffold4881_42925-46513' '(at4g27410 : 357.0) Encodes a NAC transcription factor induced in response to dessication. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response.; RESPONSIVE TO DESICCATION 26 (RD26); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 19 (TAIR:AT1G52890.1); Has 2991 Blast hits to 2983 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2991; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 233.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 199.0) no description available & (reliability: 714.0) & (original description: Putative nac, Description = NAC transcription factor, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.5scaffold4913_26384-32673' '(at2g22540 : 219.0) Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter.; SHORT VEGETATIVE PHASE (SVP); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 24 (TAIR:AT4G24540.1); Has 7281 Blast hits to 7260 proteins in 901 species: Archae - 3; Bacteria - 13; Metazoa - 824; Fungi - 296; Plants - 6010; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (q9xj66|mad22_orysa : 167.0) MADS-box transcription factor 22 (OsMADS22) - Oryza sativa (Rice) & (gnl|cdd|29020 : 112.0) no description available & (reliability: 438.0) & (original description: Putative SVP, Description = MADS-box short vegitative phase, PFAM = PF00319;PF01486)' T '33.99' 'development.unspecified' 'nbv0.5scaffold4932_62887-68468' '(gnl|cdd|68610 : 234.0) no description available & (at1g70680 : 194.0) Caleosin-related family protein; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: Caleosin-related family protein (TAIR:AT1G70670.1); Has 342 Blast hits to 337 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 281; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative PXG3, Description = Probable peroxygenase 3, PFAM = PF05042)' T '33.99' 'development.unspecified' 'nbv0.5scaffold5177_75532-103499' '(at3g05680 : 1618.0) embryo defective 2016 (EMB2016); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown. & (gnl|cdd|40019 : 806.0) no description available & (reliability: 3236.0) & (original description: Putative glysoja_043005, Description = Dof zinc finger protein DOF3.5, PFAM = PF15912)' T '33.99' 'development.unspecified' 'nbv0.5scaffold5334_85932-98788' '(at2g45650 : 133.0) sequence suggests this encodes a MADS-box transcription factor; AGAMOUS-like 6 (AGL6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, floral organ development; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 13 (TAIR:AT3G61120.1); Has 7294 Blast hits to 7293 proteins in 914 species: Archae - 0; Bacteria - 0; Metazoa - 630; Fungi - 307; Plants - 6281; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (q6eu39|mads6_orysa : 131.0) MADS-box transcription factor 6 (OsMADS6) - Oryza sativa (Rice) & (gnl|cdd|29020 : 114.0) no description available & (gnl|cdd|35238 : 88.1) no description available & (reliability: 258.0) & (original description: Putative defh7, Description = Putative MADS-domain transcription factor DEFH7, PFAM = PF01486;PF00319)' T '33.99' 'development.unspecified' 'nbv0.5scaffold5408_24109-28549' '(at4g10350 : 289.0) NAC domain protein. SMB, BRN1, and BRN2 act to regulate root cap maturation, in a partially redundant fashion.BRN1 and BRN2, control the cell wall maturation processes that are required to detach root cap layers from the root.; NAC domain containing protein 70 (NAC070); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 15 (TAIR:AT1G33280.1); Has 2970 Blast hits to 2965 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2970; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q5z6b6|nac76_orysa : 227.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (gnl|cdd|66085 : 203.0) no description available & (reliability: 578.0) & (original description: Putative nst1, Description = NAC domain-containing protein 43, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.5scaffold5440_109687-117402' '(q7f2l3|nac48_orysa : 182.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (at1g61110 : 181.0) NAC domain containing protein 25 (NAC025); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 2 (TAIR:AT3G15510.1); Has 3019 Blast hits to 3014 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3011; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|66085 : 171.0) no description available & (reliability: 362.0) & (original description: Putative AF1, Description = NAC domain-containing protein 2, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.5scaffold5747_14794-20621' '(at4g10850 : 250.0) Nodulin MtN3 family protein; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT1G66770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36836 : 203.0) no description available & (reliability: 500.0) & (original description: Putative SWEET8, Description = Bidirectional sugar transporter SWEET8, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'nbv0.5scaffold5917_114036-119448' '(at4g30840 : 393.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 786.0) & (original description: Putative NUP43, Description = Nuclear pore complex protein NUP43, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.5scaffold5986_43483-47108' '(at4g17230 : 608.0) Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family.; SCARECROW-like 13 (SCL13); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: scarecrow-like 5 (TAIR:AT1G50600.1); Has 2512 Blast hits to 2467 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 516.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 335.0) no description available & (reliability: 1216.0) & (original description: Putative SCL13, Description = Scarecrow-like protein 13, PFAM = PF03514)' T '33.99' 'development.unspecified' 'nbv0.5scaffold6266_9739-15234' '(gnl|cdd|67150 : 331.0) no description available & (q8s4w7|gai1_vitvi : 310.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 299.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 572.0) & (original description: Putative ATA, Description = Transcription factor, PFAM = PF03514)' T '33.99' 'development.unspecified' 'nbv0.5scaffold6458_45575-55408' '(at4g28530 : 276.0) NAC domain containing protein 74 (NAC074); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT5G53950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66085 : 189.0) no description available & (q5cd17|nac77_orysa : 185.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 552.0) & (original description: Putative NAC17, Description = NAC domain protein 17, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.5scaffold6542_836-19979' '(q39685|cmb1_diaca : 239.0) MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink) & (at2g03710 : 225.0) This gene belongs to the family of SEP genes. It is involved in the development of sepals, petals, stamens and carpels. Additionally, it plays a central role in the determination of flower meristem and organ identity.; SEPALLATA 4 (SEP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29020 : 127.0) no description available & (gnl|cdd|35238 : 99.3) no description available & (reliability: 444.0) & (original description: Putative AGL3, Description = Agamous-like MADS-box protein AGL3, PFAM = PF01486;PF00319)' T '33.99' 'development.unspecified' 'nbv0.5scaffold6973_24184-30742' '(at1g79700 : 281.0) Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ARIA-interacting double AP2 domain protein (TAIR:AT1G16060.1); Has 7501 Blast hits to 5104 proteins in 263 species: Archae - 0; Bacteria - 38; Metazoa - 0; Fungi - 0; Plants - 7383; Viruses - 2; Other Eukaryotes - 78 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 238.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (reliability: 536.0) & (original description: Putative ADAP, Description = AP2-like ethylene-responsive transcription factor, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'nbv0.5scaffold7232_79076-87011' '(at2g32940 : 999.0) Encodes a nuclear localized 879-amino-acid protein that contains conserved PAZ and PIWI domains that is important for the accumulation of specific heterochromatin-related siRNAs, and for DNA methylation and transcriptional gene silencing.; ARGONAUTE 6 (AGO6); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Argonaute/Dicer protein, PAZ (InterPro:IPR003100); BEST Arabidopsis thaliana protein match is: Argonaute family protein (TAIR:AT5G21150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36259 : 652.0) no description available & (gnl|cdd|72942 : 431.0) no description available & (reliability: 1998.0) & (original description: Putative AGO6, Description = Protein argonaute 6, PFAM = PF08699;PF02170;PF16488;PF02171;PF16486)' T '33.99' 'development.unspecified' 'nbv0.5scaffold7252_37006-41930' '(at2g24430 : 293.0) Arabidopsis NAC domain containing protein 39 (ANAC039); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, hypocotyl, root, leaf; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 58 (TAIR:AT3G18400.1); Has 3031 Blast hits to 3023 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 6; Plants - 3020; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 215.0) no description available & (q5cd17|nac77_orysa : 209.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 586.0) & (original description: Putative NH19, Description = Nam-like protein 19, PFAM = PF02365)' T '33.99' 'development.unspecified' 'nbv0.5scaffold7694_13941-24505' '(at1g01780 : 135.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G45800.1); Has 4819 Blast hits to 3002 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 4032; Fungi - 22; Plants - 446; Viruses - 0; Other Eukaryotes - 319 (source: NCBI BLink). & (p29675|sf3_helan : 105.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 90.9) no description available & (reliability: 270.0) & (original description: Putative atl2, Description = Pollen-specific protein SF3, PFAM = PF00412)' T '33.99' 'development.unspecified' 'nbv0.5scaffold7926_5367-31395' '(at3g43660 : 209.0) Vacuolar iron transporter (VIT) family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217); BEST Arabidopsis thaliana protein match is: Vacuolar iron transporter (VIT) family protein (TAIR:AT3G43630.1); Has 1844 Blast hits to 1835 proteins in 644 species: Archae - 71; Bacteria - 1261; Metazoa - 0; Fungi - 84; Plants - 213; Viruses - 0; Other Eukaryotes - 215 (source: NCBI BLink). & (gnl|cdd|39674 : 205.0) no description available & (p16313|no21_soybn : 151.0) Nodulin 21 (N-21) - Glycine max (Soybean) & (gnl|cdd|29967 : 146.0) no description available & (reliability: 418.0) & (original description: Putative At3g43660, Description = Vacuolar iron transporter homolog 4, PFAM = PF01988;PF01988)' T '33.99' 'development.unspecified' 'nbv0.5scaffold7931_14672-19797' '(p29162|ntp3_tobac : 724.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (at1g55570 : 681.0) SKU5 similar 12 (sks12); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 11 (TAIR:AT3G13390.1); Has 5441 Blast hits to 5412 proteins in 1035 species: Archae - 18; Bacteria - 1816; Metazoa - 269; Fungi - 1918; Plants - 1254; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|36477 : 532.0) no description available & (gnl|cdd|87357 : 150.0) no description available & (reliability: 1310.0) & (original description: Putative p303, Description = L-ascorbate oxidase-like protein, PFAM = PF07732;PF07731;PF00394)' T '33.99' 'development.unspecified' 'nbv0.5scaffold8094_8706-16259' '(at1g13980 : 1846.0) Encodes a GDP/GTP exchange factor for small G-proteins of the ADP ribosylation factor (RAF) class, and as regulator of intracellular trafficking. Homologous to Sec7p and YEC2 from yeast. Involved in the specification of apical-basal pattern formation. Essential for cell division, expansion and adhesion. It appears that heteotypic binding between the DCB and C-terminal domains of two GNOM proteins is required for membrane association, however, GNOM appears to exist predominantly as a heterodimer formed through DCB-DCB interactions.; GNOM (GN); FUNCTIONS IN: protein homodimerization activity, GTP:GDP antiporter activity; INVOLVED IN: in 13 processes; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904); BEST Arabidopsis thaliana protein match is: GNOM-like 1 (TAIR:AT5G39500.1). & (gnl|cdd|36146 : 1396.0) no description available & (gnl|cdd|65184 : 264.0) no description available & (reliability: 3692.0) & (original description: Putative GN, Description = ARF guanine-nucleotide exchange factor GNOM, PFAM = PF01369;PF12783)' T '33.99' 'development.unspecified' 'nbv0.5scaffold8110_1346-6739' '(at3g06430 : 648.0) embryo defective 2750 (EMB2750); INVOLVED IN: pollen tube development, embryo development ending in seed dormancy; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G53170.1); Has 31867 Blast hits to 12007 proteins in 283 species: Archae - 3; Bacteria - 31; Metazoa - 288; Fungi - 376; Plants - 30037; Viruses - 0; Other Eukaryotes - 1132 (source: NCBI BLink). & (q76c99|rf1_orysa : 102.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1296.0) & (original description: Putative ppr2, Description = PPR2, PFAM = PF13041;PF13041;PF13041;PF13041;PF01535;PF01535)' T '33.99' 'development.unspecified' 'nbv0.5scaffold8557_29739-34909' '(at5g65700 : 1257.0) Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM2,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM1 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs.; BARELY ANY MERISTEM 1 (BAM1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT3G49670.1). & (p93194|rpk1_iponi : 388.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 314.0) no description available & (gnl|cdd|87344 : 166.0) no description available & (reliability: 2384.0) & (original description: Putative har1, Description = Non-specific serine/threonine protein kinase, PFAM = PF13516;PF00560;PF00069)' T '33.99' 'development.unspecified' 'nbv0.5scaffold9873_1-3481' '(at1g32580 : 208.0) plastid developmental protein DAG, putative; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT2G35240.1); Has 256 Blast hits to 233 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 256; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q38732|dag_antma : 110.0) DAG protein, chloroplast precursor - Antirrhinum majus (Garden snapdragon) & (reliability: 416.0) & (original description: Putative MORF5, Description = Multiple organellar RNA editing factor 5, mitochondrial, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.5scaffold9937_9121-12191' '(at2g33430 : 321.0) differentiation and greening-like 1 (DAL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: plastid organization, endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA); LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT1G32580.1); Has 251 Blast hits to 228 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 251; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q38732|dag_antma : 127.0) DAG protein, chloroplast precursor - Antirrhinum majus (Garden snapdragon) & (reliability: 642.0) & (original description: Putative DAG, Description = Plastid developmental protein DAG, PFAM = )' T '33.99' 'development.unspecified' 'nbv0.5scaffold24648_1-1242' '(q9lly4|lpat1_brana : 204.0) 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplast precursor (EC 2.3.1.51) - Brassica napus (Rape) & (at4g30580 : 197.0) Encodes a plastidic lysophosphatidic acid acyltransferase (LPAAT). Is critical for chloroplasts phosphatidic acid biosynthesis. The null allele is embryo lethal.; ATS2; FUNCTIONS IN: 1-acylglycerol-3-phosphate O-acyltransferase activity, acyltransferase activity; INVOLVED IN: metabolic process, phosphatidylglycerol biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123), 1-acyl-sn-glycerol-3-phosphate acyltransferase (InterPro:IPR004552); BEST Arabidopsis thaliana protein match is: Phospholipid/glycerol acyltransferase family protein (TAIR:AT3G05510.1); Has 12571 Blast hits to 12571 proteins in 2517 species: Archae - 0; Bacteria - 9130; Metazoa - 376; Fungi - 153; Plants - 151; Viruses - 0; Other Eukaryotes - 2761 (source: NCBI BLink). & (gnl|cdd|38059 : 109.0) no description available & (reliability: 394.0) & (original description: Putative ACT2, Description = 1-acyl-sn-glycerol-3-phosphate acyltransferase, PFAM = PF01553)' T '33.99' 'development.unspecified' 'niben044ctg25816882_1-2405' '(at3g10500 : 98.2) NAC domain containing protein 53 (NAC053); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 2 (TAIR:AT5G04410.1); Has 3039 Blast hits to 3027 proteins in 85 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 7; Plants - 3017; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative NAC9, Description = NAC domain protein 13, PFAM = )' T '33.99' 'development.unspecified' 'niben044ctg25948687_1-3120' '(at1g69120 : 210.0) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.; APETALA1 (AP1); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 8031 Blast hits to 8015 proteins in 981 species: Archae - 10; Bacteria - 56; Metazoa - 785; Fungi - 329; Plants - 6623; Viruses - 2; Other Eukaryotes - 226 (source: NCBI BLink). & (q41276|ap1_sinal : 207.0) Floral homeotic protein APETALA1 (MADS C) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|29020 : 121.0) no description available & (gnl|cdd|35238 : 98.9) no description available & (reliability: 420.0) & (original description: Putative squa, Description = Squamosa protein, PFAM = PF01486;PF00319)' T '33.99' 'development.unspecified' 'niben044scf00000046ctg012_1-3139' '(at1g12260 : 311.0) Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.; NAC 007 (NAC007); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: Arabidopsis NAC domain containing protein 26 (TAIR:AT1G62700.1); Has 3158 Blast hits to 3153 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 2; Plants - 3027; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (gnl|cdd|66085 : 210.0) no description available & (q5z6b6|nac76_orysa : 208.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (reliability: 622.0) & (original description: Putative NAC007, Description = NAC domain-containing protein 7, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben044scf00000103ctg001_9108-12975' '(at5g07050 : 432.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT2G40900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 864.0) & (original description: Putative nlp1, Description = WAT1-related protein, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben044scf00000193ctg007_17113-22840' '(at3g55770 : 180.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1). & (p29675|sf3_helan : 138.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 137.0) no description available & (reliability: 356.0) & (original description: Putative atl2, Description = Pollen-specific protein SF3, PFAM = PF00412;PF00412)' T '33.99' 'development.unspecified' 'niben044scf00000274ctg012_3786-7009' '(at5g58003 : 133.0) Encodes a polypeptide that contains FCPH and BRCT domains. RNAi suppression mutant lines were generated, which displayed a range of phenotypic abnormalities, including: incomplete to no cotyledon expansion, slow growth, epinastic leaves or small inflorescences.; C-terminal domain phosphatase-like 4 (CPL4); FUNCTIONS IN: phosphoprotein phosphatase activity; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FCP1-like phosphatase, phosphatase domain (InterPro:IPR011947), NLI interacting factor (InterPro:IPR004274), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: C-terminal domain phosphatase-like 3 (TAIR:AT2G33540.1); Has 1202 Blast hits to 1005 proteins in 219 species: Archae - 0; Bacteria - 0; Metazoa - 364; Fungi - 271; Plants - 333; Viruses - 0; Other Eukaryotes - 234 (source: NCBI BLink). & (gnl|cdd|35544 : 96.0) no description available & (gnl|cdd|47876 : 87.2) no description available & (reliability: 266.0) & (original description: Putative CPL4, Description = Carboxy-terminal domain phosphatase-like protein, PFAM = PF03031)' T '33.99' 'development.unspecified' 'niben044scf00000394ctg013_285-5824' '(at2g30300 : 372.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, sperm cell; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G01630.1); Has 1130 Blast hits to 1113 proteins in 261 species: Archae - 8; Bacteria - 316; Metazoa - 4; Fungi - 113; Plants - 577; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|70288 : 237.0) no description available & (reliability: 744.0) & (original description: Putative Os05g0475700, Description = Os05g0475700 protein, PFAM = PF06813)' T '33.99' 'development.unspecified' 'niben044scf00000860ctg011_3431-13860' '(at2g17250 : 627.0) EMBRYO DEFECTIVE 2762 (EMB2762); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding factor (InterPro:IPR005612); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37365 : 283.0) no description available & (gnl|cdd|67525 : 141.0) no description available & (reliability: 1254.0) & (original description: Putative EMB2762, Description = CCAAT-binding factor, PFAM = PF03914)' T '33.99' 'development.unspecified' 'niben044scf00000867ctg038_488-15032' '(gnl|cdd|58514 : 386.0) no description available & (at1g75880 : 384.0) SGNH hydrolase-type esterase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G75890.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p40603|apg_brana : 267.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 768.0) & (original description: Putative EXL1, Description = GDSL esterase/lipase EXL3, PFAM = PF00657;PF00657)' T '33.99' 'development.unspecified' 'niben044scf00001782ctg001_404-4572' '(gnl|cdd|71337 : 174.0) no description available & (at4g00650 : 107.0) Encodes a major determinant of natural variation in Arabidopsis flowering time. Dominant alleles of FRI confer a vernalization requirement causing plants to overwinter vegetatively. Many early flowering accessions carry loss-of-function fri alleles .Twenty distinct haplotypes that contain non-functional FRI alleles have been identified and the distribution analyzed in over 190 accessions. The common lab strains- Col and Ler each carry loss of function mutations in FRI.; FRIGIDA (FRI); CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT5G48385.1); Has 841 Blast hits to 841 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 841; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative PGSC0003DMG400031151, Description = Putative ovule protein, PFAM = PF07899)' T '33.99' 'development.unspecified' 'niben044scf00002007ctg012_323-2947' '(at4g32551 : 100.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (reliability: 200.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = )' T '33.99' 'development.unspecified' 'niben044scf00002392ctg004_622-6605' '(gnl|cdd|36477 : 472.0) no description available & (at4g12420 : 461.0) Encodes a protein of unknown function involved in directed root tip growth. It is a member of 19-member gene family and is distantly related structurally to the multiple-copper oxidases ascorbate oxidase and laccase, though it lacks the copper-binding domains. The protein is glycosylated and GPI-anchored. It is localized to the plasma membrane and the cell wall. The gene is expressed most strongly in expanding tissues.; SKU5; FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: cell tip growth; LOCATED IN: plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 2 (TAIR:AT5G51480.1). & (q00624|aso_brana : 399.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 134.0) no description available & (reliability: 922.0) & (original description: Putative sks3, Description = Multi-copper oxidase-like protein, PFAM = PF07731;PF07732;PF00394)' T '33.99' 'development.unspecified' 'niben044scf00002392ctg006_2847-6360' '(at5g04410 : 271.0) NAC family member, functions as a transcriptional activator, regulates flavonoid biosynthesis under high light.; NAC domain containing protein 2 (NAC2); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 53 (TAIR:AT3G10500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66085 : 197.0) no description available & (q7gcl7|nac74_orysa : 171.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 542.0) & (original description: Putative NAC44, Description = Putative NAC domain class transcription factor, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben044scf00002437ctg011_1327-4601' '(at5g41920 : 445.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G54220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67150 : 289.0) no description available & (q8s4w7|gai1_vitvi : 201.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 890.0) & (original description: Putative SCL23, Description = Scarecrow-like protein 23, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben044scf00002474ctg006_1-4282' '(at3g08850 : 225.0) Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive.; RAPTOR1; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), WD40 repeat (InterPro:IPR001680), Regulatory associated protein of TOR (InterPro:IPR004083), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: HEAT repeat ;WD domain, G-beta repeat protein protein (TAIR:AT5G01770.1); Has 7799 Blast hits to 6065 proteins in 379 species: Archae - 2; Bacteria - 1590; Metazoa - 2741; Fungi - 1618; Plants - 862; Viruses - 0; Other Eukaryotes - 986 (source: NCBI BLink). & (gnl|cdd|36730 : 169.0) no description available & (reliability: 450.0) & (original description: Putative RAPTOR1, Description = Regulatory-associated protein of TOR 1, PFAM = )' T '33.99' 'development.unspecified' 'niben044scf00002559ctg016_1-5043' '(q9xh43|cet2_tobac : 333.0) CEN-like protein 2 - Nicotiana tabacum (Common tobacco) & (at2g27550 : 273.0) encodes a protein similar to TFL1. overexpression leads to similar phenotype as TFL1 overexpression. expressed specifically in the hypocotyl and null mutation does not result in phenotypes exhibited by TFL1 null mutations.; centroradialis (ATC); CONTAINS InterPro DOMAIN/s: Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); BEST Arabidopsis thaliana protein match is: PEBP (phosphatidylethanolamine-binding protein) family protein (TAIR:AT5G03840.1); Has 2165 Blast hits to 2165 proteins in 308 species: Archae - 0; Bacteria - 2; Metazoa - 605; Fungi - 111; Plants - 1396; Viruses - 3; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|38556 : 203.0) no description available & (gnl|cdd|29585 : 178.0) no description available & (reliability: 546.0) & (original description: Putative CET2, Description = CEN-like protein 2, PFAM = PF01161)' T '33.99' 'development.unspecified' 'niben044scf00002677ctg047_1523-5915' '(at1g07530 : 642.0) Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm.; SCARECROW-like 14 (SCL14); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G29060.1); Has 2535 Blast hits to 2449 proteins in 301 species: Archae - 0; Bacteria - 12; Metazoa - 27; Fungi - 4; Plants - 2483; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|67150 : 338.0) no description available & (q69vg1|cigr1_orysa : 221.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (reliability: 1218.0) & (original description: Putative SCL14, Description = Scarecrow-like protein 14, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben044scf00002997ctg013_529-16069' '(at2g34680 : 1010.0) isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular.; AUXIN-INDUCED IN ROOT CULTURES 9 (AIR9); INVOLVED IN: response to auxin stimulus, lateral root morphogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Outer arm dynein light chain 1 protein (TAIR:AT1G78230.1); Has 5746 Blast hits to 1796 proteins in 310 species: Archae - 0; Bacteria - 1053; Metazoa - 771; Fungi - 422; Plants - 290; Viruses - 42; Other Eukaryotes - 3168 (source: NCBI BLink). & (reliability: 2020.0) & (original description: Putative AIR9, Description = 187-kDa microtubule-associated protein AIR9, PFAM = )' T '33.99' 'development.unspecified' 'niben044scf00003256ctg021_1876-5440' '(gnl|cdd|67150 : 143.0) no description available & (q5ne24|nsp2_medtr : 107.0) Nodulation signaling pathway 2 protein - Medicago truncatula (Barrel medic) & (at5g17490 : 90.5) DELLA subfamily member involved in GA signal transduction; RGA-like protein 3 (RGL3); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative GRAS5, Description = GRAS5, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben044scf00003471ctg003_1-3695' '(at1g58250 : 466.0) SABRE, putative gene of unknown function, homologous to maize apt1 gene. Required for normal cell expansion in the root cortex. The sabre mutation results in abnormal cell expansion. Encodes a rare message; very low level of expression was detected in roots and shoots.; SABRE (SAB); CONTAINS InterPro DOMAIN/s: Protein of unknown function FMP27, domain-6, C-terminal (InterPro:IPR019443), Protein of unknown function FMP27, domain-4 (InterPro:IPR019441); BEST Arabidopsis thaliana protein match is: Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain (TAIR:AT5G49680.2). & (gnl|cdd|37121 : 252.0) no description available & (reliability: 932.0) & (original description: Putative APT1, Description = Golgi-body localization protein, PFAM = PF10351)' T '33.99' 'development.unspecified' 'niben044scf00003471ctg006_1-5684' '(at1g58250 : 633.0) SABRE, putative gene of unknown function, homologous to maize apt1 gene. Required for normal cell expansion in the root cortex. The sabre mutation results in abnormal cell expansion. Encodes a rare message; very low level of expression was detected in roots and shoots.; SABRE (SAB); CONTAINS InterPro DOMAIN/s: Protein of unknown function FMP27, domain-6, C-terminal (InterPro:IPR019443), Protein of unknown function FMP27, domain-4 (InterPro:IPR019441); BEST Arabidopsis thaliana protein match is: Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain (TAIR:AT5G49680.2). & (gnl|cdd|37121 : 304.0) no description available & (reliability: 1266.0) & (original description: Putative APT1, Description = Golgi-body localization protein, PFAM = PF10351)' T '33.99' 'development.unspecified' 'niben044scf00003514ctg012_1-3041' '(at1g18100 : 173.0) Encodes a member of the FT and TFL1 family of phosphatidylethanolamine-binding proteins. It is expressed in seeds and up-regulated in response to ABA. Loss of function mutants show decreased rate of germination in the presence of ABA. ABA dependent regulation is mediated by both ABI3 and ABI5. ABI5 promotes MFT expression, primarily in the radicle-hypocotyl transition zone and ABI3 suppresses it in the seed.; E12A11; CONTAINS InterPro DOMAIN/s: Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); BEST Arabidopsis thaliana protein match is: PEBP (phosphatidylethanolamine-binding protein) family protein (TAIR:AT5G03840.1); Has 2417 Blast hits to 2417 proteins in 371 species: Archae - 0; Bacteria - 118; Metazoa - 639; Fungi - 192; Plants - 1429; Viruses - 3; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|38556 : 164.0) no description available & (q9xh44|cet1_tobac : 144.0) CEN-like protein 1 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29585 : 128.0) no description available & (reliability: 346.0) & (original description: Putative MFT, Description = Protein MOTHER of FT and TFL1, PFAM = PF01161)' T '33.99' 'development.unspecified' 'niben044scf00003549ctg000_1-4668' '(at1g66330 : 342.0) senescence-associated family protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 684.0) & (original description: Putative At1g66330, Description = Senescence-associated family protein, PFAM = )' T '33.99' 'development.unspecified' 'niben044scf00003740ctg001_2945-6861' '(at1g26870 : 287.0) FEZ (FEZ); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 94 (TAIR:AT5G39820.1); Has 2973 Blast hits to 2966 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 2971; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 200.0) no description available & (q52qh4|nac68_orysa : 189.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 574.0) & (original description: Putative NAC20, Description = NAC domain class transcription factor, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben044scf00003788ctg014_1-1694' '(at5g06710 : 130.0) Homeobox-leucine zipper protein.; homeobox from Arabidopsis thaliana (HAT14); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT4G17460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35704 : 104.0) no description available & (reliability: 260.0) & (original description: Putative HAT3, Description = Homeobox associated leucine zipper protein, PFAM = PF02183;PF00046)' T '33.99' 'development.unspecified' 'niben044scf00004138ctg006_22204-28110' '(at2g45690 : 288.0) Encodes a protein with similarity to yeast Pep16p, a membrane localized protein involved in peroxisome assembly and protein-trafficking. SSE1 mutant seeds do not accumulate oils and dessicated seeds have a shrunken appearance. Involved in protein and oil body biogenesis. SSE is expressed during seed development, reaching the highest peak in mature siliques. Expression in leaves and roots is low compared to cotyledons and flowers. Located in peroxisomes and endoplasmic reticulum. Homologous to the peroxin PEX16 and complements the pex16 mutants of the yeast Yarrowia lipolytica.; SHRUNKEN SEED 1 (SSE1); CONTAINS InterPro DOMAIN/s: Peroxisome membrane protein, Pex16 (InterPro:IPR013919); Has 261 Blast hits to 259 proteins in 120 species: Archae - 0; Bacteria - 0; Metazoa - 102; Fungi - 93; Plants - 47; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|39746 : 188.0) no description available & (gnl|cdd|72035 : 185.0) no description available & (reliability: 576.0) & (original description: Putative PEX16, Description = Peroxisome biogenesis protein 16, PFAM = PF08610)' T '33.99' 'development.unspecified' 'niben044scf00004238ctg000_910-8751' '(gnl|cdd|71337 : 196.0) no description available & (at4g00650 : 155.0) Encodes a major determinant of natural variation in Arabidopsis flowering time. Dominant alleles of FRI confer a vernalization requirement causing plants to overwinter vegetatively. Many early flowering accessions carry loss-of-function fri alleles .Twenty distinct haplotypes that contain non-functional FRI alleles have been identified and the distribution analyzed in over 190 accessions. The common lab strains- Col and Ler each carry loss of function mutations in FRI.; FRIGIDA (FRI); CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT5G48385.1); Has 841 Blast hits to 841 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 841; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative PGSC0003DMG400031150, Description = FRIGIDA, PFAM = PF07899)' T '33.99' 'development.unspecified' 'niben044scf00004276ctg005_25744-35450' '(at2g37860 : 412.0) Encodes a protein of unknown function. Mutants have pale leaves, lower cell density in the palisade parenchyma and increased sensitivity to ozone and virulent Pseudomonas syringae; LOWER CELL DENSITY 1 (LCD1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: leaf development; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: reticulata-related 1 (TAIR:AT5G22790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 824.0) & (original description: Putative RE, Description = Protein RETICULATA, chloroplastic, PFAM = PF11891)' T '33.99' 'development.unspecified' 'niben044scf00004683ctg023_10644-13563' '(at4g09960 : 112.0) a MADS box transcription factor expressed in the carpel and ovules; SEEDSTICK (STK); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, ovule development, carpel development; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT2G42830.2). & (q40872|ag_pangi : 103.0) Floral homeotic protein AGAMOUS (GAG2) - Panax ginseng (Korean ginseng) & (reliability: 204.0) & (original description: Putative ag, Description = AGAMOUS-like protein, PFAM = PF01486)' T '33.99' 'development.unspecified' 'niben044scf00004774ctg002_219-10247' '(at1g51190 : 350.0) Encodes a member of the AINTEGUMENTA-like (AIL) subclass of the AP2/EREBP family of transcription factors and is essential for quiescent center (QC) specification and stem cell activity. It is a key effector for establishment of the stem cell niche during embryonic pattern formation. It is transcribed in response to auxin accumulation and is dependent on auxin response transcription factors.; PLETHORA 2 (PLT2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G20840.1); Has 7787 Blast hits to 5250 proteins in 253 species: Archae - 0; Bacteria - 8; Metazoa - 4; Fungi - 0; Plants - 7694; Viruses - 2; Other Eukaryotes - 79 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 290.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 87.2) no description available & (reliability: 700.0) & (original description: Putative AIL1, Description = AP2-like ethylene-responsive transcription factor, PFAM = PF00847)' T '33.99' 'development.unspecified' 'niben044scf00004828ctg034_10384-14814' '(at4g15920 : 170.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT3G16690.1); Has 980 Blast hits to 942 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 205; Fungi - 0; Plants - 645; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (gnl|cdd|36836 : 158.0) no description available & (reliability: 340.0) & (original description: Putative dl4000c, Description = Bidirectional sugar transporter SWEET, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben044scf00004867ctg009_6488-10595' '(gnl|cdd|36401 : 343.0) no description available & (at1g52540 : 299.0) Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G15890.1); Has 98543 Blast hits to 97377 proteins in 3831 species: Archae - 68; Bacteria - 11032; Metazoa - 36701; Fungi - 6941; Plants - 30133; Viruses - 293; Other Eukaryotes - 13375 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 214.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 158.0) no description available & (reliability: 598.0) & (original description: Putative At3g15890, Description = PTI1-like tyrosine-protein kinase At3g15890, PFAM = PF00069)' T '33.99' 'development.unspecified' 'niben044scf00005037ctg011_5164-8895' '(at3g48740 : 248.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: homolog of Medicago truncatula MTN3 (TAIR:AT5G23660.1); Has 1006 Blast hits to 953 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 236; Fungi - 0; Plants - 627; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|36836 : 212.0) no description available & (gnl|cdd|86234 : 85.2) no description available & (reliability: 496.0) & (original description: Putative SWEET11, Description = Bidirectional sugar transporter SWEET11, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben044scf00005165ctg004_1991-14026' '(at4g07410 : 939.0) Transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT1G27470.1); Has 10654 Blast hits to 6476 proteins in 452 species: Archae - 14; Bacteria - 3757; Metazoa - 2166; Fungi - 2748; Plants - 788; Viruses - 0; Other Eukaryotes - 1181 (source: NCBI BLink). & (gnl|cdd|37259 : 491.0) no description available & (gnl|cdd|29257 : 90.1) no description available & (reliability: 1772.0) & (original description: Putative At1g27470, Description = Putative uncharacterized protein At1g27470, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben044scf00005203ctg022_8983-11608' '(at1g19270 : 137.0) DA1 (DA1); CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Ubiquitin interacting motif (InterPro:IPR003903), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: LIM domain-containing protein (TAIR:AT4G36860.1); Has 3538 Blast hits to 2617 proteins in 167 species: Archae - 0; Bacteria - 18; Metazoa - 3009; Fungi - 63; Plants - 177; Viruses - 0; Other Eukaryotes - 271 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative , Description = , PFAM = PF12315)' T '33.99' 'development.unspecified' 'niben044scf00005280ctg002_321-8288' '(at1g21850 : 291.0) SKU5 similar 8 (sks8); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 7 (TAIR:AT1G21860.1); Has 5145 Blast hits to 5091 proteins in 951 species: Archae - 16; Bacteria - 1604; Metazoa - 263; Fungi - 1857; Plants - 1262; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (gnl|cdd|36477 : 278.0) no description available & (q00624|aso_brana : 258.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 102.0) no description available & (reliability: 536.0) & (original description: Putative glysoja_017008, Description = Monocopper oxidase-like protein SKU5, PFAM = PF07732;PF00394;PF07731)' T '33.99' 'development.unspecified' 'niben044scf00005280ctg002_1192-8562' '(gnl|cdd|36477 : 443.0) no description available & (at5g48450 : 439.0) Encodes a protein with two DUF26 domains and a signal peptide for secretion. The protein is transported to the apoplast when it is expressed as a GFP fusion protein.; SKU5 similar 3 (sks3); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT4G12420.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q00624|aso_brana : 395.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 130.0) no description available & (reliability: 876.0) & (original description: Putative sks3, Description = Multi-copper oxidase-like protein, PFAM = PF07731;PF07732;PF00394)' T '33.99' 'development.unspecified' 'niben044scf00005292ctg004_318-6632' '(at1g30610 : 432.0) Mutations in this locus result in embryo lethality. Embryo shape at seed maturity is globular.; EMBRYO DEFECTIVE 2279 (EMB2279); FUNCTIONS IN: binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G67570.1). & (reliability: 864.0) & (original description: Putative DG1, Description = PPR8522, PFAM = PF01535;PF01535;PF13041)' T '33.99' 'development.unspecified' 'niben044scf00005405ctg013_5369-8836' '(q38732|dag_antma : 262.0) DAG protein, chloroplast precursor - Antirrhinum majus (Garden snapdragon) & (at1g11430 : 257.0) plastid developmental protein DAG, putative; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT3G06790.2); Has 252 Blast hits to 229 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 252; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 514.0) & (original description: Putative MORF9, Description = Multiple organellar RNA editing factor 9, chloroplastic, PFAM = )' T '33.99' 'development.unspecified' 'niben044scf00005475ctg013_41067-51767' '(q42429|agl8_soltu : 301.0) Agamous-like MADS-box protein AGL8 homolog (POTM1-1) - Solanum tuberosum (Potato) & (at5g60910 : 242.0) MADS box gene negatively regulated by APETALA1; AGAMOUS-like 8 (AGL8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of flower development, maintenance of inflorescence meristem identity, fruit development; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G69120.1); Has 3783 Blast hits to 3782 proteins in 618 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 10; Plants - 3766; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|29020 : 118.0) no description available & (gnl|cdd|35238 : 93.5) no description available & (reliability: 484.0) & (original description: Putative m28, Description = FRUITFULL-like protein, PFAM = PF01486;PF00319)' T '33.99' 'development.unspecified' 'niben044scf00005565ctg001_852-4356' '(at5g61430 : 343.0) NAC domain containing protein 100 (NAC100); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 80 (TAIR:AT5G07680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5cd17|nac77_orysa : 209.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (gnl|cdd|66085 : 208.0) no description available & (reliability: 686.0) & (original description: Putative nac1, Description = NAC domain-containing protein 1, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben044scf00005610ctg006_898-4625' '(at3g48740 : 242.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: homolog of Medicago truncatula MTN3 (TAIR:AT5G23660.1); Has 1006 Blast hits to 953 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 236; Fungi - 0; Plants - 627; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|36836 : 209.0) no description available & (gnl|cdd|86234 : 92.5) no description available & (reliability: 484.0) & (original description: Putative MTN3, Description = Bidirectional sugar transporter SWEET, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben044scf00005612ctg021_313-2926' '(at3g27950 : 106.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G14450.1); Has 3142 Blast hits to 3112 proteins in 96 species: Archae - 0; Bacteria - 88; Metazoa - 0; Fungi - 8; Plants - 3037; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (q7y1x1|est_hevbr : 102.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 212.0) & (original description: Putative At3g27950, Description = Alpha-L-fucosidase 2, putative, PFAM = )' T '33.99' 'development.unspecified' 'niben044scf00005876ctg001_1-5112' '(at2g03140 : 390.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: esterase/lipase/thioesterase family protein (TAIR:AT3G50790.1). & (reliability: 780.0) & (original description: Putative Os09g0436800, Description = CAAX amino terminal protease-like protein, PFAM = PF02517)' T '33.99' 'development.unspecified' 'niben044scf00006126ctg021_3053-7706' '(at3g13340 : 688.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G55680.1). & (gnl|cdd|29257 : 85.0) no description available & (reliability: 1376.0) & (original description: Putative gbp3, Description = GAMYB-binding protein, PFAM = PF00400)' T '33.99' 'development.unspecified' 'niben044scf00006294ctg003_13227-17216' '(q38732|dag_antma : 148.0) DAG protein, chloroplast precursor - Antirrhinum majus (Garden snapdragon) & (at1g11430 : 146.0) plastid developmental protein DAG, putative; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT3G06790.2); Has 252 Blast hits to 229 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 252; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative MORF1, Description = Multiple organellar RNA editing factor 1, mitochondrial, PFAM = )' T '33.99' 'development.unspecified' 'niben044scf00006372ctg012_1-5762' '(q8lsn2|bbm2_brana : 377.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (at5g17430 : 366.0) Encodes an AP2-domain containing protein similar to ANT. Expressed in embryos and lateral root primordium.; BABY BOOM (BBM); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G51190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47695 : 93.4) no description available & (reliability: 700.0) & (original description: Putative BBM1, Description = AP2-like ethylene-responsive transcription factor BBM1, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'niben044scf00006474ctg012_624-4162' '(at4g37650 : 558.0) Involved in radial organization of the root and shoot axial organs. Essential for normal shoot gravitropism. The protein moves in a highly specific manner from the cells of the stele in which it is synthesized outward. Movement requires sequences within the GRAS and VHIID domains.; SHORT ROOT (SHR); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G49950.1); Has 2470 Blast hits to 2429 proteins in 304 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 15; Plants - 2427; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|67150 : 259.0) no description available & (q8gve1|cigr2_orysa : 187.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (reliability: 1116.0) & (original description: Putative SHR, Description = Protein SHORT-ROOT, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben044scf00006545ctg014_1-2699' '(q9lly4|lpat1_brana : 353.0) 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplast precursor (EC 2.3.1.51) - Brassica napus (Rape) & (at4g30580 : 338.0) Encodes a plastidic lysophosphatidic acid acyltransferase (LPAAT). Is critical for chloroplasts phosphatidic acid biosynthesis. The null allele is embryo lethal.; ATS2; FUNCTIONS IN: 1-acylglycerol-3-phosphate O-acyltransferase activity, acyltransferase activity; INVOLVED IN: metabolic process, phosphatidylglycerol biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123), 1-acyl-sn-glycerol-3-phosphate acyltransferase (InterPro:IPR004552); BEST Arabidopsis thaliana protein match is: Phospholipid/glycerol acyltransferase family protein (TAIR:AT3G05510.1); Has 12571 Blast hits to 12571 proteins in 2517 species: Archae - 0; Bacteria - 9130; Metazoa - 376; Fungi - 153; Plants - 151; Viruses - 0; Other Eukaryotes - 2761 (source: NCBI BLink). & (gnl|cdd|38059 : 200.0) no description available & (gnl|cdd|30553 : 120.0) no description available & (reliability: 676.0) & (original description: Putative LPAT1, Description = 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic, PFAM = PF01553)' T '33.99' 'development.unspecified' 'niben044scf00006606ctg006_104-4178' '(at3g15510 : 318.0) Note of caution: not to be confused with another protein (AtNAC6 locus AT5G39610) which on occasion has also been referred to as AtNAC2.; NAC domain containing protein 2 (NAC2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT1G52880.1); Has 3051 Blast hits to 3043 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 3049; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 241.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 219.0) no description available & (reliability: 592.0) & (original description: Putative NAC056, Description = NAC transcription factor 56, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben044scf00006717ctg029_1-2523' '(at1g26870 : 261.0) FEZ (FEZ); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 94 (TAIR:AT5G39820.1); Has 2973 Blast hits to 2966 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 2971; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 183.0) no description available & (q52qh4|nac68_orysa : 171.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 522.0) & (original description: Putative Os02g0745250, Description = Os02g0745250 protein, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben044scf00007066ctg007_7154-13126' '(at5g65700 : 1493.0) Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM2,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM1 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs.; BARELY ANY MERISTEM 1 (BAM1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT3G49670.1). & (p93194|rpk1_iponi : 493.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 315.0) no description available & (gnl|cdd|87344 : 166.0) no description available & (reliability: 2834.0) & (original description: Putative BAM1, Description = Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1, PFAM = PF08263;PF13855;PF13516;PF00069;PF12799)' T '33.99' 'development.unspecified' 'niben044scf00007218ctg001_1-3521' '(at1g49510 : 206.0) embryo defective 1273 (emb1273); Has 25 Blast hits to 25 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative emb1273, Description = At1g49510, PFAM = )' T '33.99' 'development.unspecified' 'niben044scf00007414ctg002_1-6468' '(at5g17440 : 277.0) LUC7 related protein; CONTAINS InterPro DOMAIN/s: LUC7 related (InterPro:IPR004882); BEST Arabidopsis thaliana protein match is: LUC7 related protein (TAIR:AT3G03340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66842 : 119.0) no description available & (gnl|cdd|36015 : 113.0) no description available & (reliability: 532.0) & (original description: Putative luc7l, Description = Putative RNA-binding protein Luc7-like 2, PFAM = PF03194;PF03194)' T '33.99' 'development.unspecified' 'niben044scf00007461ctg001_1-2679' '(at5g64530 : 206.0) xylem NAC domain 1 (XND1); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 25 (TAIR:AT1G61110.1); Has 2741 Blast hits to 2738 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2741; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 125.0) no description available & (q52qh4|nac68_orysa : 100.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 412.0) & (original description: Putative NAC104, Description = NAC domain-containing protein 104, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben044scf00007858ctg007_8782-12297' '(at5g46700 : 360.0) Encodes a transmembrane protein of the tetraspanin (TET) family, one of 17 members found in Arabidopsis. Double mutant analysis showed that TRN1 and TRN2 act in the same pathway. Required for the maintenance of both the radial pattern of tissue differentiation in the root and for the subsequent circumferential pattern within the epidermis.; TORNADO 2 (TRN2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: radial pattern formation, meristem structural organization, aging, leaf vascular tissue pattern formation, root morphogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 32 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499); BEST Arabidopsis thaliana protein match is: tetraspanin2 (TAIR:AT2G19580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84702 : 81.6) no description available & (reliability: 720.0) & (original description: Putative TRN2, Description = Protein TORNADO 2, PFAM = PF00335)' T '33.99' 'development.unspecified' 'niben044scf00008200ctg012_18166-25177' '(at5g14250 : 469.0) Encodes subunit 3 of the COP9 signalosome.; CONSTITUTIVE PHOTOMORPHOGENIC 13 (COP13); CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); Has 402 Blast hits to 401 proteins in 151 species: Archae - 0; Bacteria - 0; Metazoa - 218; Fungi - 81; Plants - 54; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|37793 : 360.0) no description available & (reliability: 938.0) & (original description: Putative CSN3, Description = COP9 signalosome complex subunit 3, PFAM = PF01399)' T '33.99' 'development.unspecified' 'niben044scf00008228ctg002_477-7572' '(at1g13980 : 1738.0) Encodes a GDP/GTP exchange factor for small G-proteins of the ADP ribosylation factor (RAF) class, and as regulator of intracellular trafficking. Homologous to Sec7p and YEC2 from yeast. Involved in the specification of apical-basal pattern formation. Essential for cell division, expansion and adhesion. It appears that heteotypic binding between the DCB and C-terminal domains of two GNOM proteins is required for membrane association, however, GNOM appears to exist predominantly as a heterodimer formed through DCB-DCB interactions.; GNOM (GN); FUNCTIONS IN: protein homodimerization activity, GTP:GDP antiporter activity; INVOLVED IN: in 13 processes; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904); BEST Arabidopsis thaliana protein match is: GNOM-like 1 (TAIR:AT5G39500.1). & (gnl|cdd|36146 : 1390.0) no description available & (gnl|cdd|65184 : 259.0) no description available & (reliability: 3476.0) & (original description: Putative GBF1, Description = Pattern formation protein EMB30, PFAM = PF12783;PF01369)' T '33.99' 'development.unspecified' 'niben044scf00008328ctg001_4254-10196' '(at3g10480 : 310.0) NAC domain containing protein 50 (NAC050); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 52 (TAIR:AT3G10490.2); Has 2988 Blast hits to 2970 proteins in 99 species: Archae - 4; Bacteria - 3; Metazoa - 28; Fungi - 4; Plants - 2904; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|66085 : 201.0) no description available & (q7gcl7|nac74_orysa : 172.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 620.0) & (original description: Putative NH4, Description = Nam-like protein 4, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben044scf00008570ctg003_1-5783' '(at4g10350 : 356.0) NAC domain protein. SMB, BRN1, and BRN2 act to regulate root cap maturation, in a partially redundant fashion.BRN1 and BRN2, control the cell wall maturation processes that are required to detach root cap layers from the root.; NAC domain containing protein 70 (NAC070); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 15 (TAIR:AT1G33280.1); Has 2970 Blast hits to 2965 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2970; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q5z6b6|nac76_orysa : 246.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (gnl|cdd|66085 : 214.0) no description available & (reliability: 712.0) & (original description: Putative BRN2, Description = Protein BEARSKIN2, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben044scf00009051ctg027_1-2233' '(at5g45160 : 184.0) Root hair defective 3 GTP-binding protein (RHD3); FUNCTIONS IN: GTP binding; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Root hair defective 3 GTP-binding (InterPro:IPR008803); BEST Arabidopsis thaliana protein match is: Root hair defective 3 GTP-binding protein (RHD3) (TAIR:AT3G13870.1); Has 535 Blast hits to 521 proteins in 188 species: Archae - 0; Bacteria - 2; Metazoa - 73; Fungi - 186; Plants - 129; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink). & (gnl|cdd|37414 : 184.0) no description available & (gnl|cdd|69407 : 118.0) no description available & (reliability: 368.0) & (original description: Putative sey1, Description = Protein ROOT HAIR DEFECTIVE 3 homolog, PFAM = PF05879)' T '33.99' 'development.unspecified' 'niben044scf00009270ctg000_3353-7025' '(at3g48740 : 263.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: homolog of Medicago truncatula MTN3 (TAIR:AT5G23660.1); Has 1006 Blast hits to 953 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 236; Fungi - 0; Plants - 627; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|36836 : 230.0) no description available & (gnl|cdd|86234 : 93.3) no description available & (reliability: 526.0) & (original description: Putative SWEET11, Description = Bidirectional sugar transporter SWEET11, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben044scf00009443ctg014_914-8280' '(at4g00730 : 997.0) Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development; ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29139 : 207.0) no description available & (reliability: 1938.0) & (original description: Putative ANL2, Description = Homeobox-leucine zipper protein ANTHOCYANINLESS 2, PFAM = PF00046;PF01852)' T '33.99' 'development.unspecified' 'niben044scf00009756ctg017_18733-23370' '(at5g43822 : 180.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative LOC100193693, Description = Os10g0566900 protein, PFAM = PF15011)' T '33.99' 'development.unspecified' 'niben044scf00009850ctg003_928-4311' '(at5g48850 : 196.0) homologous to the wheat sulphate deficiency-induced gene sdi1. Expression in root and leaf is induced by sulfur starvation. Knockout mutants retained higher root and leaf sulfate concentrations, indicating a role in regulation of stored sulfate pools.; SULPHUR DEFICIENCY-INDUCED 1 (ATSDI1); FUNCTIONS IN: binding; INVOLVED IN: cellular response to sulfur starvation, regulation of sulfur utilization; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G04770.1); Has 255 Blast hits to 246 proteins in 34 species: Archae - 2; Bacteria - 37; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative SDI1, Description = AtSDI1, PFAM = PF13181)' T '33.99' 'development.unspecified' 'niben044scf00009991ctg004_10264-14607' '(at5g20700 : 98.6) Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT1G74940.1); Has 476 Blast hits to 476 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 476; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 197.2) & (original description: Putative dl4870c, Description = BnaC07g19900D protein, PFAM = PF04570)' T '33.99' 'development.unspecified' 'niben044scf00010166ctg001_1-7907' '(at3g11980 : 437.0) Similar to fatty acid reductases.; MALE STERILITY 2 (MS2); FUNCTIONS IN: fatty-acyl-CoA reductase (alcohol-forming) activity, oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor; INVOLVED IN: microsporogenesis, pollen exine formation; LOCATED IN: chloroplast; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Male sterility (InterPro:IPR004262), NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 6 (TAIR:AT3G56700.1); Has 2390 Blast hits to 2358 proteins in 427 species: Archae - 4; Bacteria - 606; Metazoa - 985; Fungi - 290; Plants - 282; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (gnl|cdd|36435 : 364.0) no description available & (gnl|cdd|87425 : 221.0) no description available & (reliability: 874.0) & (original description: Putative ms2, Description = Male sterility protein 2, PFAM = PF03015;PF07993)' T '33.99' 'development.unspecified' 'niben044scf00010738ctg005_972-10485' '(at5g07300 : 719.0) Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms.; BONZAI 2 (BON2); FUNCTIONS IN: calcium-dependent phospholipid binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36541 : 493.0) no description available & (gnl|cdd|29232 : 302.0) no description available & (reliability: 1438.0) & (original description: Putative BON2, Description = Protein BONZAI 2, PFAM = PF07002;PF00168;PF00168)' T '33.99' 'development.unspecified' 'niben044scf00010804ctg002_1-15440' '(at1g22770 : 1174.0) Together with CONSTANTS (CO) and FLOWERING LOCUS T (FT), GIGANTEA promotes flowering under long days in a circadian clock-controlled flowering pathway. GI acts earlier than CO and FT in the pathway by increasing CO and FT mRNA abundance. Located in the nucleus. Regulates several developmental processes, including photoperiod-mediated flowering, phytochrome B signaling, circadian clock, carbohydrate metabolism, and cold stress response. The gene's transcription is controlled by the circadian clock and it is post-transcriptionally regulated by light and dark. Forms a complex with FKF1 on the CO promoter to regulate CO expression.; GIGANTEA (GI); Has 351 Blast hits to 349 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 351; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q9awl7|gigan_orysa : 1082.0) Protein GIGANTEA - Oryza sativa (Rice) & (reliability: 2348.0) & (original description: Putative GI5, Description = Gigantea-5, PFAM = )' T '33.99' 'development.unspecified' 'niben044scf00010804ctg004_1-2711' '(q9awl7|gigan_orysa : 311.0) Protein GIGANTEA - Oryza sativa (Rice) & (at1g22770 : 300.0) Together with CONSTANTS (CO) and FLOWERING LOCUS T (FT), GIGANTEA promotes flowering under long days in a circadian clock-controlled flowering pathway. GI acts earlier than CO and FT in the pathway by increasing CO and FT mRNA abundance. Located in the nucleus. Regulates several developmental processes, including photoperiod-mediated flowering, phytochrome B signaling, circadian clock, carbohydrate metabolism, and cold stress response. The gene's transcription is controlled by the circadian clock and it is post-transcriptionally regulated by light and dark. Forms a complex with FKF1 on the CO promoter to regulate CO expression.; GIGANTEA (GI); Has 351 Blast hits to 349 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 351; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 600.0) & (original description: Putative gi1, Description = Photoperiodic response / GIGANTEA, PFAM = )' T '33.99' 'development.unspecified' 'niben044scf00010881ctg018_7027-10224' '(at1g12910 : 640.0) Encodes a protein with similarity to the petunia WD repeat protein an11.; ANTHOCYANIN11 (ATAN11); CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G26640.1); Has 4731 Blast hits to 4446 proteins in 351 species: Archae - 6; Bacteria - 291; Metazoa - 1848; Fungi - 1200; Plants - 767; Viruses - 0; Other Eukaryotes - 619 (source: NCBI BLink). & (gnl|cdd|35511 : 541.0) no description available & (reliability: 1280.0) & (original description: Putative LWD1, Description = WD repeat-containing protein LWD1, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben044scf00010967ctg009_81-6423' '(at4g32551 : 300.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (gnl|cdd|29257 : 160.0) no description available & (gnl|cdd|35487 : 125.0) no description available & (reliability: 600.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben044scf00010967ctg012_1-3300' '(at4g32551 : 290.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (gnl|cdd|29257 : 150.0) no description available & (gnl|cdd|35493 : 115.0) no description available & (reliability: 580.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben044scf00011208ctg001_5460-13457' '(at3g50670 : 253.0) Encodes U1 snRNP 70K; U1 small nuclear ribonucleoprotein-70K (U1-70K); FUNCTIONS IN: RNA binding, nucleotide binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U1 small nuclear ribonucleoprotein of 70kDa MW N-terminal (InterPro:IPR022023), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G43370.1); Has 501 Blast hits to 501 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 126; Plants - 97; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|35336 : 196.0) no description available & (reliability: 506.0) & (original description: Putative RNU1, Description = U1 small nuclear ribonucleoprotein 70 kDa, PFAM = PF12220;PF00076)' T '33.99' 'development.unspecified' 'niben044scf00011335ctg019_5632-9066' '(at1g21450 : 584.0) Encodes a scarecrow-like protein (SCL1). Member of GRAS gene family.; SCARECROW-like 1 (SCL1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G48150.2); Has 2480 Blast hits to 2441 proteins in 303 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2475; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 437.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 341.0) no description available & (reliability: 1168.0) & (original description: Putative SCL1, Description = Scarecrow-like protein 1, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben044scf00011424ctg011_1-3845' '(gnl|cdd|66085 : 112.0) no description available & (at1g61110 : 104.0) NAC domain containing protein 25 (NAC025); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 2 (TAIR:AT3G15510.1); Has 3019 Blast hits to 3014 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3011; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q7ezt1|nac67_orysa : 103.0) NAC domain-containing protein 67 (ONAC067) - Oryza sativa (Rice) & (reliability: 208.0) & (original description: Putative NAC1, Description = NAC domain-containing protein 18, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben044scf00011686ctg005_10683-15493' '(at1g21460 : 306.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT5G53190.1); Has 988 Blast hits to 930 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 221; Fungi - 0; Plants - 643; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36836 : 178.0) no description available & (gnl|cdd|86234 : 84.8) no description available & (reliability: 612.0) & (original description: Putative SWEET1, Description = Bidirectional sugar transporter SWEET1, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben044scf00011845ctg010_33871-36694' '(at5g65380 : 306.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, ripening, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G44050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36561 : 248.0) no description available & (gnl|cdd|30880 : 98.4) no description available & (reliability: 612.0) & (original description: Putative BnaC03g49010D, Description = BnaC03g49010D protein, PFAM = PF01554)' T '33.99' 'development.unspecified' 'niben044scf00012150ctg008_4463-14941' '(q42429|agl8_soltu : 282.0) Agamous-like MADS-box protein AGL8 homolog (POTM1-1) - Solanum tuberosum (Potato) & (at5g60910 : 248.0) MADS box gene negatively regulated by APETALA1; AGAMOUS-like 8 (AGL8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of flower development, maintenance of inflorescence meristem identity, fruit development; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G69120.1); Has 3783 Blast hits to 3782 proteins in 618 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 10; Plants - 3766; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 96.6) no description available & (reliability: 496.0) & (original description: Putative TDR4, Description = Agamous-like MADS-box protein AGL8 homolog, PFAM = PF00319;PF01486)' T '33.99' 'development.unspecified' 'niben044scf00012225ctg006_12190-19031' '(at3g13870 : 571.0) required for regulated cell expansion and normal root hair development. Encodes an evolutionarily conserved protein with putative GTP-binding motifs that is implicated in the control of vesicle trafficking between the endoplasmic reticulum and the Golgi compartments.; ROOT HAIR DEFECTIVE 3 (RHD3); FUNCTIONS IN: GTP binding; INVOLVED IN: root epidermal cell differentiation, plant-type cell wall biogenesis, ER to Golgi vesicle-mediated transport, actin cytoskeleton organization, cell tip growth; LOCATED IN: endoplasmic reticulum, plasma membrane, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Root hair defective 3 GTP-binding (InterPro:IPR008803); BEST Arabidopsis thaliana protein match is: Root hair defective 3 GTP-binding protein (RHD3) (TAIR:AT1G72960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37414 : 493.0) no description available & (gnl|cdd|69407 : 453.0) no description available & (reliability: 1142.0) & (original description: Putative FRA4, Description = Protein ROOT HAIR DEFECTIVE 3 homolog, PFAM = PF05879)' T '33.99' 'development.unspecified' 'niben044scf00012470ctg002_535-4630' '(at3g18400 : 269.0) NAC domain containing protein 58 (NAC058); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 38 (TAIR:AT2G24430.2); Has 3056 Blast hits to 3045 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3049; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (q5cd17|nac77_orysa : 210.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (gnl|cdd|66085 : 210.0) no description available & (reliability: 538.0) & (original description: Putative nac1, Description = Protein CUP-SHAPED COTYLEDON 2, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben044scf00012575ctg002_12500-20682' '(at1g79280 : 1110.0) Encodes a 237-kDA protein with similarity to vertebrate Tpr, a long coiled-coil proteins of nuclear pore inner basket filaments. It is localized to the inner surface of the nuclear envelope and is a component of the nuclear pore-associated steps of sumoylation and mRNA export in plants. Mutations affect flowering time regulation and other developmental processes. Probably acts in the same pathway as ESD4 in affecting flowering time, vegetative and inflorescence development.; nuclear pore anchor (NUA); CONTAINS InterPro DOMAIN/s: Tetratricopeptide, MLP1/MLP2-like (InterPro:IPR012929). & (gnl|cdd|39873 : 484.0) no description available & (gnl|cdd|71363 : 119.0) no description available & (reliability: 2220.0) & (original description: Putative NbTPRa, Description = Nuclear pore complex protein TPRa, PFAM = PF07926)' T '33.99' 'development.unspecified' 'niben044scf00012870ctg006_2164-5953' '(at1g79350 : 195.0) embryo defective 1135 (EMB1135); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, LSD1-type (InterPro:IPR005735), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); Has 4247 Blast hits to 3784 proteins in 326 species: Archae - 2; Bacteria - 520; Metazoa - 2572; Fungi - 347; Plants - 469; Viruses - 36; Other Eukaryotes - 301 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative EMB1135, Description = RING/FYVE/PHD zinc finger protein, PFAM = )' T '33.99' 'development.unspecified' 'niben044scf00012987ctg004_5353-14385' '(at4g29860 : 258.0) Encodes a WD repeat protein with seven WD repeat motifs, predicted to function in protein-protein interaction. Mutations caused defects in both embryo and seedling development.; EMBRYO DEFECTIVE 2757 (EMB2757); FUNCTIONS IN: nucleotide binding; INVOLVED IN: acquisition of desiccation tolerance, embryo development, embryo development ending in seed dormancy; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: stem, rosette leaf, fruit, root, cultured cell; EXPRESSED DURING: F mature embryo stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G11160.1); Has 24053 Blast hits to 12842 proteins in 620 species: Archae - 42; Bacteria - 6408; Metazoa - 6694; Fungi - 5230; Plants - 2600; Viruses - 0; Other Eukaryotes - 3079 (source: NCBI BLink). & (gnl|cdd|35543 : 154.0) no description available & (gnl|cdd|29257 : 91.6) no description available & (reliability: 516.0) & (original description: Putative ALT2, Description = Protein DECREASED SIZE EXCLUSION LIMIT 1, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben044scf00013314ctg013_6539-9547' '(at1g61340 : 93.6) F-box family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G21510.1). & (reliability: 187.2) & (original description: Putative)' T '33.99' 'development.unspecified' 'niben044scf00013322ctg011_498-14644' '(at4g00060 : 959.0) maternal effect embryo arrest 44 (MEE44); FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), PAP/25A-associated (InterPro:IPR002058); BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT5G53770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37117 : 109.0) no description available & (gnl|cdd|34857 : 100.0) no description available & (reliability: 1918.0) & (original description: Putative Sb10g026810, Description = Putative uncharacterized protein Sb10g026810, PFAM = PF03828;PF01909)' T '33.99' 'development.unspecified' 'niben044scf00013429ctg013_1-6742' '(at5g07590 : 763.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 672 Blast hits to 646 proteins in 166 species: Archae - 0; Bacteria - 97; Metazoa - 271; Fungi - 156; Plants - 85; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|39697 : 607.0) no description available & (reliability: 1526.0) & (original description: Putative WRAP73, Description = WD repeat-containing protein WRAP73, PFAM = )' T '33.99' 'development.unspecified' 'niben044scf00013543ctg006_1-3855' '(at2g46770 : 347.0) NAC transcription factor NST1. NST1 and NST2 are redundant in regulating secondary wall thickening in anther walls and siliques. NST1 promoter was detected in various tissues in which lignified secondary walls develop.; EMBRYO DEFECTIVE 2301 (EMB2301); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain protein 66 (TAIR:AT3G61910.1); Has 2975 Blast hits to 2968 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 2973; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q5z6b6|nac76_orysa : 263.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (gnl|cdd|66085 : 207.0) no description available & (reliability: 694.0) & (original description: Putative NAC043, Description = NAC domain-containing protein 43, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben044scf00013610ctg006_8263-12790' '(at5g06710 : 199.0) Homeobox-leucine zipper protein.; homeobox from Arabidopsis thaliana (HAT14); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT4G17460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35704 : 145.0) no description available & (reliability: 398.0) & (original description: Putative HAT14, Description = Homeobox-leucine zipper protein HAT14, PFAM = PF02183;PF00046)' T '33.99' 'development.unspecified' 'niben044scf00013776ctg000_8304-11952' '(at3g28050 : 142.0) nodulin MtN21 /EamA-like transporter family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G40240.1); Has 1917 Blast hits to 1909 proteins in 293 species: Archae - 12; Bacteria - 576; Metazoa - 4; Fungi - 10; Plants - 1200; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative BnaA04g10060D, Description = WAT1-related protein, PFAM = PF00892)' T '33.99' 'development.unspecified' 'niben044scf00013859ctg005_3340-19444' '(at2g02560 : 1858.0) Arabidopsis thaliana homolog of human CAND1 (cullin-associated and neddylation-dissociated). Putative similarity to TBP-interacting protein TIP120. Ubiquitously expressed in plant tissues throughout development. T-DNA insertion mutant plants were completely sterile and resistant to sirtinol and auxin, but not to gibberellins or brassinolide. Displayed developmental phenotypes similar to those of axr1, namely, short petioles, downwardly curling leaves, shorter inflorescence. Required for SCF function and appears to modulate SCF complex cycling. Physically interacts with CUL1.; cullin-associated and neddylation dissociated (CAND1); FUNCTIONS IN: binding; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, vegetative to reproductive phase transition of meristem; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), TATA-binding protein interacting (TIP20) (InterPro:IPR013932); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37035 : 1427.0) no description available & (gnl|cdd|72048 : 203.0) no description available & (reliability: 3716.0) & (original description: Putative CAND1, Description = Cullin-associated NEDD8-dissociated protein 1, PFAM = PF08623)' T '33.99' 'development.unspecified' 'niben044scf00013969ctg006_1-3270' '(at5g54200 : 334.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G15470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35504 : 210.0) no description available & (reliability: 668.0) & (original description: Putative At2g37670, Description = WD repeat-containing protein 44, PFAM = )' T '33.99' 'development.unspecified' 'niben044scf00014027ctg002_1-5147' '(at2g30300 : 377.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, sperm cell; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G01630.1); Has 1130 Blast hits to 1113 proteins in 261 species: Archae - 8; Bacteria - 316; Metazoa - 4; Fungi - 113; Plants - 577; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|70288 : 236.0) no description available & (reliability: 754.0) & (original description: Putative At2g30300, Description = Nodulin-like protein, PFAM = PF06813)' T '33.99' 'development.unspecified' 'niben044scf00014030ctg030_3788-10885' '(gnl|cdd|68707 : 102.0) no description available & (at5g66350 : 89.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.; SHORT INTERNODES (SHI); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative LRP1, Description = Expression of terpenoids 1, PFAM = PF05142)' T '33.99' 'development.unspecified' 'niben044scf00014422ctg014_1668-9441' '(at2g21150 : 437.0) XAP5 family protein involved in light regulation of the circadian clock and photomorphogenesis. Nuclear localized.; XAP5 CIRCADIAN TIMEKEEPER (XCT); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of circadian rhythm, response to blue light, response to red light, regulation of photomorphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: XAP5 protein (InterPro:IPR007005); Has 1721 Blast hits to 1474 proteins in 237 species: Archae - 2; Bacteria - 40; Metazoa - 614; Fungi - 190; Plants - 85; Viruses - 22; Other Eukaryotes - 768 (source: NCBI BLink). & (gnl|cdd|38105 : 369.0) no description available & (gnl|cdd|68493 : 294.0) no description available & (reliability: 874.0) & (original description: Putative XCT, Description = Protein XAP5 CIRCADIAN TIMEKEEPER, PFAM = PF04921)' T '33.99' 'development.unspecified' 'niben044scf00014434ctg003_1483-4071' '(at1g63260 : 263.0) Member of TETRASPANIN family; tetraspanin10 (TET10); INVOLVED IN: aging; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: tetraspanin3 (TAIR:AT3G45600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative TET10, Description = Tetraspanin-10, PFAM = )' T '33.99' 'development.unspecified' 'niben044scf00014647ctg011_714-5416' '(at2g43000 : 231.0) NAC domain containing protein 42 (NAC042); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT3G12910.1); Has 2932 Blast hits to 2927 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2932; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 177.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 170.0) no description available & (reliability: 462.0) & (original description: Putative JUB1, Description = Transcription factor JUNGBRUNNEN 1, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben044scf00015388ctg016_7755-10604' '(gnl|cdd|68707 : 209.0) no description available & (at3g51060 : 187.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC); STYLISH 1 (STY1); FUNCTIONS IN: protein heterodimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT5G66350.1); Has 244 Blast hits to 244 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 9; Plants - 179; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative SRS5, Description = Protein SHI RELATED SEQUENCE 5, PFAM = PF05142)' T '33.99' 'development.unspecified' 'niben044scf00015633ctg005_6637-17410' '(at2g34150 : 236.0) Encodes a member of the SCAR family.These proteins are part of a complex (WAVE) complex.The SCAR subunit activates the ARP2/3 complex which in turn act as a nucleator for actin filaments.; SCAR family protein; BEST Arabidopsis thaliana protein match is: SCAR family protein (TAIR:AT1G29170.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5qna6|scrl2_orysa : 198.0) SCAR-like protein 2 - Oryza sativa (Rice) & (reliability: 472.0) & (original description: Putative DIS3, Description = Protein SCAR2, PFAM = )' T '33.99' 'development.unspecified' 'niben044scf00016207ctg000_3819-8947' '(at3g01930 : 820.0) Major facilitator superfamily protein; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G14120.1); Has 2557 Blast hits to 2447 proteins in 764 species: Archae - 24; Bacteria - 1311; Metazoa - 10; Fungi - 268; Plants - 609; Viruses - 0; Other Eukaryotes - 335 (source: NCBI BLink). & (gnl|cdd|70288 : 294.0) no description available & (reliability: 1640.0) & (original description: Putative Sb07g026140, Description = Putative uncharacterized protein Sb07g026140, PFAM = PF06813)' T '33.99' 'development.unspecified' 'niben044scf00016312ctg007_950-6993' '(q39685|cmb1_diaca : 172.0) MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink) & (at2g03710 : 152.0) This gene belongs to the family of SEP genes. It is involved in the development of sepals, petals, stamens and carpels. Additionally, it plays a central role in the determination of flower meristem and organ identity.; SEPALLATA 4 (SEP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85485 : 103.0) no description available & (reliability: 288.0) & (original description: Putative 37135, Description = Sepallata 1, PFAM = PF01486)' T '33.99' 'development.unspecified' 'niben044scf00016419ctg016_1-5661' '(at4g37750 : 390.0) ANT is required for control of cell proliferation and encodes a putative transcriptional regulator similar to AP2. Loss of function alleles have reduced fertility, abnormal ovules and abnormal lateral organs. Expressed specifically in the chalaza and in floral organ primordia.; AINTEGUMENTA (ANT); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G72570.1); Has 7251 Blast hits to 5191 proteins in 264 species: Archae - 0; Bacteria - 9; Metazoa - 18; Fungi - 8; Plants - 7086; Viruses - 4; Other Eukaryotes - 126 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 308.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 92.6) no description available & (reliability: 780.0) & (original description: Putative ANT, Description = AP2-like ethylene-responsive transcription factor ANT, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'niben044scf00016615ctg008_1318-4367' '(at4g24220 : 550.0) encodes a novel protein containing mammalian death domain involved in programmed cell death. Gene is expressed in vascular system and mutants carrying dominant mutation in the gene have defective vascular patterning. Gene expression is induced specifically by wounding.; VEIN PATTERNING 1 (VEP1); FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: xylem and phloem pattern formation, response to wounding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G58750.1); Has 711 Blast hits to 707 proteins in 202 species: Archae - 0; Bacteria - 240; Metazoa - 0; Fungi - 168; Plants - 221; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (reliability: 1100.0) & (original description: Putative wcaG, Description = Putative progesterone 5-beta-reductase, PFAM = )' T '33.99' 'development.unspecified' 'niben044scf00016768ctg006_431-4294' '(p29162|ntp3_tobac : 1068.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (at1g55570 : 767.0) SKU5 similar 12 (sks12); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 11 (TAIR:AT3G13390.1); Has 5441 Blast hits to 5412 proteins in 1035 species: Archae - 18; Bacteria - 1816; Metazoa - 269; Fungi - 1918; Plants - 1254; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|36477 : 575.0) no description available & (gnl|cdd|87357 : 149.0) no description available & (reliability: 1514.0) & (original description: Putative p303, Description = L-ascorbate oxidase-like protein, PFAM = PF07732;PF07731;PF00394)' T '33.99' 'development.unspecified' 'niben044scf00016994ctg002_6341-10385' '(at3g48740 : 261.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: homolog of Medicago truncatula MTN3 (TAIR:AT5G23660.1); Has 1006 Blast hits to 953 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 236; Fungi - 0; Plants - 627; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|36836 : 231.0) no description available & (gnl|cdd|86234 : 92.5) no description available & (reliability: 522.0) & (original description: Putative SWEET10, Description = Bidirectional sugar transporter SWEET10, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben044scf00017494ctg015_1-2867' '(at2g42840 : 126.0) Encodes a putative extracellular proline-rich protein is exclusively expressed in the L1 layer of vegetative, inflorescence and floral meristems and the protoderm of organ primordia.; protodermal factor 1 (PDF1); Has 74620 Blast hits to 36810 proteins in 1713 species: Archae - 153; Bacteria - 12776; Metazoa - 27126; Fungi - 11565; Plants - 10582; Viruses - 2385; Other Eukaryotes - 10033 (source: NCBI BLink). & (gnl|cdd|35481 : 90.4) no description available & (reliability: 252.0) & (original description: Putative PDF1, Description = BnaC04g48550D protein, PFAM = )' T '33.99' 'development.unspecified' 'niben044scf00017757ctg011_21115-29490' '(at1g21460 : 231.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT5G53190.1); Has 988 Blast hits to 930 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 221; Fungi - 0; Plants - 643; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36836 : 166.0) no description available & (reliability: 462.0) & (original description: Putative Sweet3, Description = Bidirectional sugar transporter SWEET, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben044scf00017804ctg012_310-6039' '(at4g03020 : 437.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat (InterPro:IPR001680), WD repeat protein 23 (InterPro:IPR017399), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1). & (gnl|cdd|29257 : 87.0) no description available & (gnl|cdd|35487 : 86.4) no description available & (reliability: 874.0) & (original description: Putative wdr23, Description = LEC14B protein, PFAM = PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben044scf00017812ctg003_1498-4575' '(gnl|cdd|70011 : 133.0) no description available & (at3g48140 : 112.0) B12D protein; CONTAINS InterPro DOMAIN/s: B12D (InterPro:IPR010530); BEST Arabidopsis thaliana protein match is: B12D protein (TAIR:AT3G29970.1); Has 143 Blast hits to 143 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative b12D, Description = B12D-like protein, PFAM = PF06522)' T '33.99' 'development.unspecified' 'niben044scf00017992ctg001_13837-16402' '(at4g14110 : 161.0) Represses photomorphogenesis and induces skotomorphogenesis in the dark. A component of the COP9 signalosome complex.; CONSTITUTIVE PHOTOMORPHOGENIC 9 (COP9); CONTAINS InterPro DOMAIN/s: COP9 signalosome, subunit CSN8 (InterPro:IPR019280); Has 218 Blast hits to 218 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 136; Fungi - 17; Plants - 54; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|39615 : 158.0) no description available & (reliability: 322.0) & (original description: Putative COP9, Description = COP9 signalosome complex subunit 8, PFAM = PF10075)' T '33.99' 'development.unspecified' 'niben044scf00018251ctg008_24876-27583' '(at2g32700 : 135.0) Encodes a WD40 repeat and LUFS domain containing protein that is similar to LUG. Interacts physically with SEUSS and likely functions as part of a repressor complex that represses AG.; LEUNIG_homolog (LUH); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: flower development, negative regulation of transcription, embryo development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LisH dimerisation motif;WD40/YVTN repeat-like-containing domain (TAIR:AT4G32551.1). & (reliability: 244.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400)' T '33.99' 'development.unspecified' 'niben044scf00018810ctg010_1191-5379' '(at2g28550 : 286.0) related to AP2.7 (RAP2.7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 (TAIR:AT5G60120.1). & (q8l3u3|bbm1_brana : 139.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 87.6) no description available & (reliability: 566.0) & (original description: Putative Ap2B, Description = PHAP2B protein, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'niben044scf00018935ctg001_12486-15840' '(q40872|ag_pangi : 145.0) Floral homeotic protein AGAMOUS (GAG2) - Panax ginseng (Korean ginseng) & (at4g18960 : 144.0) Floral homeotic gene encoding a MADS domain transcription factor. Specifies floral meristem and carpel and stamen identity. Binds CArG box sequences. It is the only C function gene. It interacts genetically with the other homeotic genes to specify the floral organs.; AGAMOUS (AG); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: stamen development, maintenance of floral organ identity, leaf development, carpel development; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT3G58780.3). & (gnl|cdd|85485 : 86.0) no description available & (reliability: 288.0) & (original description: Putative PLE, Description = PLE, PFAM = PF01486)' T '33.99' 'development.unspecified' 'niben044scf00019569ctg016_2960-8893' '(at3g61230 : 265.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G45800.1); Has 5500 Blast hits to 3584 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 4540; Fungi - 25; Plants - 547; Viruses - 0; Other Eukaryotes - 388 (source: NCBI BLink). & (p29675|sf3_helan : 181.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 173.0) no description available & (reliability: 530.0) & (original description: Putative PLIM2A, Description = LIM domain-containing protein PLIM2a, PFAM = PF00412;PF00412)' T '33.99' 'development.unspecified' 'niben044scf00020025ctg008_23579-27702' '(at5g06710 : 194.0) Homeobox-leucine zipper protein.; homeobox from Arabidopsis thaliana (HAT14); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT4G17460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35704 : 140.0) no description available & (gnl|cdd|47667 : 85.0) no description available & (reliability: 388.0) & (original description: Putative HAT14, Description = Homeobox-leucine zipper protein HAT14, PFAM = PF00046;PF02183)' T '33.99' 'development.unspecified' 'niben044scf00020721ctg017_5503-13603' '(at2g22540 : 275.0) Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter.; SHORT VEGETATIVE PHASE (SVP); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 24 (TAIR:AT4G24540.1); Has 7281 Blast hits to 7260 proteins in 901 species: Archae - 3; Bacteria - 13; Metazoa - 824; Fungi - 296; Plants - 6010; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (q5k4r0|mad47_orysa : 192.0) MADS-box transcription factor 47 (OsMADS47) - Oryza sativa (Rice) & (gnl|cdd|29020 : 119.0) no description available & (gnl|cdd|35238 : 80.0) no description available & (reliability: 550.0) & (original description: Putative J, Description = MADS-box protein JOINTLESS, PFAM = PF00319;PF01486)' T '33.99' 'development.unspecified' 'niben044scf00020749ctg007_1-4247' '(at4g29230 : 396.0) NAC domain containing protein 75 (NAC075); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 99 (TAIR:AT5G56620.1); Has 3052 Blast hits to 2928 proteins in 176 species: Archae - 2; Bacteria - 22; Metazoa - 475; Fungi - 52; Plants - 2293; Viruses - 3; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|66085 : 134.0) no description available & (reliability: 792.0) & (original description: Putative NAC1, Description = NAC domain-containing protein 8, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben044scf00020832ctg004_979-6044' '(q39685|cmb1_diaca : 145.0) MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink) & (at2g03710 : 130.0) This gene belongs to the family of SEP genes. It is involved in the development of sepals, petals, stamens and carpels. Additionally, it plays a central role in the determination of flower meristem and organ identity.; SEPALLATA 4 (SEP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85485 : 92.1) no description available & (reliability: 260.0) & (original description: Putative m2, Description = MADS-box transcription factor, PFAM = PF01486)' T '33.99' 'development.unspecified' 'niben044scf00021468ctg003_1-2892' '(at3g48740 : 183.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: homolog of Medicago truncatula MTN3 (TAIR:AT5G23660.1); Has 1006 Blast hits to 953 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 236; Fungi - 0; Plants - 627; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|36836 : 161.0) no description available & (reliability: 366.0) & (original description: Putative MTN3, Description = Bidirectional sugar transporter SWEET, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben044scf00021919ctg000_647-3188' '(at2g23810 : 95.9) Member of TETRASPANIN family; tetraspanin8 (TET8); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, conserved site (InterPro:IPR018503), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: tetraspanin9 (TAIR:AT4G30430.1); Has 603 Blast hits to 600 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 0; Plants - 433; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative PGSC0003DMG400004077, Description = Senescence-associated family protein, PFAM = PF00335)' T '33.99' 'development.unspecified' 'niben044scf00022976ctg009_64-6421' '(at3g13300 : 419.0) Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development.; VARICOSE (VCS); FUNCTIONS IN: protein homodimerization activity, nucleotide binding; INVOLVED IN: mRNA catabolic process, deadenylation-independent decapping of nuclear-transcribed mRNA, leaf morphogenesis; LOCATED IN: cytosol, nucleus, cytoplasmic mRNA processing body; EXPRESSED IN: whole plant, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: varicose-related (TAIR:AT3G13290.1); Has 885 Blast hits to 799 proteins in 264 species: Archae - 2; Bacteria - 218; Metazoa - 230; Fungi - 185; Plants - 114; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|37127 : 325.0) no description available & (reliability: 838.0) & (original description: Putative EDC4, Description = Enhancer of mRNA-decapping protein 4, PFAM = PF16529)' T '33.99' 'development.unspecified' 'niben044scf00024423ctg008_1789-4679' '(at5g58360 : 103.0) ovate family protein 3 (OFP3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 4 (TAIR:AT1G06920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68419 : 83.8) no description available & (reliability: 206.0) & (original description: Putative PGSC0003DMG400030384, Description = Ovate transcriptional repressor, PFAM = PF04844;PF13724)' T '33.99' 'development.unspecified' 'niben044scf00024836ctg000_1-12720' '(at2g19520 : 738.0) Controls flowering.; FVE; FUNCTIONS IN: metal ion binding; INVOLVED IN: flower development, unidimensional cell growth, trichome morphogenesis, leaf morphogenesis; LOCATED IN: nucleolus, nucleus, CUL4 RING ubiquitin ligase complex, cytoplasm; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Histone-binding protein RBBP4 (InterPro:IPR022052), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: nucleosome/chromatin assembly factor group C5 (TAIR:AT4G29730.1); Has 27643 Blast hits to 19007 proteins in 669 species: Archae - 18; Bacteria - 3366; Metazoa - 11144; Fungi - 6221; Plants - 3473; Viruses - 0; Other Eukaryotes - 3421 (source: NCBI BLink). & (gnl|cdd|35485 : 408.0) no description available & (gnl|cdd|29257 : 105.0) no description available & (reliability: 1476.0) & (original description: Putative MSI4, Description = WD-40 repeat-containing protein MSI4, PFAM = PF08662;PF12265;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben044scf00025210ctg002_1-2483' '(gnl|cdd|39674 : 204.0) no description available & (at3g43660 : 201.0) Vacuolar iron transporter (VIT) family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217); BEST Arabidopsis thaliana protein match is: Vacuolar iron transporter (VIT) family protein (TAIR:AT3G43630.1); Has 1844 Blast hits to 1835 proteins in 644 species: Archae - 71; Bacteria - 1261; Metazoa - 0; Fungi - 84; Plants - 213; Viruses - 0; Other Eukaryotes - 215 (source: NCBI BLink). & (p16313|no21_soybn : 146.0) Nodulin 21 (N-21) - Glycine max (Soybean) & (gnl|cdd|29963 : 144.0) no description available & (reliability: 402.0) & (original description: Putative At3g43660, Description = Vacuolar iron transporter homolog 4, PFAM = PF01988;PF01988)' T '33.99' 'development.unspecified' 'niben044scf00025512ctg000_20364-23436' '(at2g34980 : 255.0) Encodes a putative phosphatidylinositol-glycan synthase subunit C gene. It is involved in the first step of the glycosylphosphatidylinositol (GPI) biosynthetic pathway.; SETH1; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol N-acetylglucosaminyltransferase (InterPro:IPR009450); Has 335 Blast hits to 331 proteins in 171 species: Archae - 0; Bacteria - 0; Metazoa - 120; Fungi - 117; Plants - 38; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|38269 : 182.0) no description available & (gnl|cdd|69926 : 155.0) no description available & (reliability: 510.0) & (original description: Putative SETH1, Description = Phosphatidylinositol glycan, class C, PFAM = PF06432)' T '33.99' 'development.unspecified' 'niben044scf00025784ctg002_1-5886' '(at3g61790 : 534.0) Protein with RING/U-box and TRAF-like domains; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: multicellular organismal development, ubiquitin-dependent protein catabolic process, protein ubiquitination; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Seven-in-absentia protein, TRAF-like domain (InterPro:IPR018121), Zinc finger, SIAH-type (InterPro:IPR013010), Zinc finger, RING-type (InterPro:IPR001841), Seven In Absentia Homolog-type (InterPro:IPR013323), Seven-in-absentia protein, sina (InterPro:IPR004162), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT4G27880.1); Has 1836 Blast hits to 1817 proteins in 706 species: Archae - 0; Bacteria - 0; Metazoa - 1264; Fungi - 11; Plants - 486; Viruses - 2; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|38212 : 313.0) no description available & (gnl|cdd|86255 : 279.0) no description available & (q8t3y0|sinal_drome : 145.0) Probable E3 ubiquitin-protein ligase sina-like CG13030 (EC 6.3.2.-) - Drosophila melanogaster (Fruit fly) & (reliability: 1068.0) & (original description: Putative SINAT3, Description = E3 ubiquitin-protein ligase SINAT3, PFAM = PF03145)' T '33.99' 'development.unspecified' 'niben044scf00025931ctg004_424-4032' '(at5g13180 : 266.0) Encodes a NAC domain transcription factor that interacts with VND7 and negatively regulates xylem vessel formation.; NAC domain containing protein 83 (NAC083); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 41 (TAIR:AT2G33480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66085 : 194.0) no description available & (q53nf7|nac71_orysa : 175.0) NAC domain-containing protein 71 (ONAC071) - Oryza sativa (Rice) & (reliability: 532.0) & (original description: Putative NAC083, Description = NAC domain-containing protein 83, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben044scf00026189ctg005_37275-42280' '(at3g55770 : 277.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1). & (p29675|sf3_helan : 182.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 169.0) no description available & (reliability: 544.0) & (original description: Putative WLIM2B, Description = LIM domain-containing protein WLIM2b, PFAM = PF00412;PF00412)' T '33.99' 'development.unspecified' 'niben044scf00026420ctg002_8200-14155' '(gnl|cdd|70383 : 469.0) no description available & (at3g51250 : 421.0) Senescence/dehydration-associated protein-related; CONTAINS InterPro DOMAIN/s: Senescence/spartin-associated (InterPro:IPR009686); BEST Arabidopsis thaliana protein match is: Senescence/dehydration-associated protein-related (TAIR:AT2G17840.1); Has 288 Blast hits to 288 proteins in 88 species: Archae - 0; Bacteria - 8; Metazoa - 87; Fungi - 46; Plants - 136; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 842.0) & (original description: Putative ERD7, Description = Probable senescence related protein, PFAM = PF06911)' T '33.99' 'development.unspecified' 'niben044scf00026558ctg002_8308-13435' '(q03416|glob_tobac : 308.0) Floral homeotic protein GLOBOSA - Nicotiana tabacum (Common tobacco) & (at5g20240 : 167.0) Floral homeotic gene encoding a MADS domain transcription factor. Required for the specification of petal and stamen identities.; PISTILLATA (PI); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G23260.1); Has 7000 Blast hits to 6999 proteins in 918 species: Archae - 0; Bacteria - 3; Metazoa - 620; Fungi - 300; Plants - 6000; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|29020 : 124.0) no description available & (gnl|cdd|35238 : 83.1) no description available & (reliability: 334.0) & (original description: Putative GLO, Description = Floral homeotic protein GLOBOSA, PFAM = PF00319)' T '33.99' 'development.unspecified' 'niben044scf00026734ctg011_1-2391' '(at3g12090 : 212.0) Member of TETRASPANIN family; tetraspanin6 (TET6); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499); BEST Arabidopsis thaliana protein match is: tetraspanin5 (TAIR:AT4G23410.1); Has 433 Blast hits to 431 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 429; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 424.0) & (original description: Putative SA5, Description = Senescence-associated family protein, PFAM = PF00335)' T '33.99' 'development.unspecified' 'niben044scf00026948ctg013_133-6346' '(at1g45230 : 226.0) Protein of unknown function (DUF3223); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3223 (InterPro:IPR021602); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3223) (TAIR:AT3G46630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative DCL, Description = Protein DCL, chloroplastic, PFAM = PF11523)' T '33.99' 'development.unspecified' 'niben044scf00027047ctg012_1-5815' '(at3g15610 : 542.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G52730.1); Has 43706 Blast hits to 23089 proteins in 800 species: Archae - 76; Bacteria - 7357; Metazoa - 15603; Fungi - 10314; Plants - 4879; Viruses - 0; Other Eukaryotes - 5477 (source: NCBI BLink). & (gnl|cdd|35499 : 502.0) no description available & (gnl|cdd|29257 : 156.0) no description available & (reliability: 1070.0) & (original description: Putative strap, Description = Serine-threonine kinase receptor-associated protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben044scf00027766ctg012_2873-12819' '(at1g09380 : 200.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G07050.1); Has 5897 Blast hits to 5875 proteins in 1081 species: Archae - 84; Bacteria - 3492; Metazoa - 6; Fungi - 4; Plants - 1243; Viruses - 0; Other Eukaryotes - 1068 (source: NCBI BLink). & (reliability: 400.0) & (original description: Putative PGSC0003DMG400000553, Description = WAT1-related protein, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben044scf00028647ctg003_2591-5595' '(at5g01840 : 92.0) Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. Functions as a transcriptional repressor that suppresses cell elongation.; ovate family protein 1 (OFP1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: N-terminal protein myristoylation, regulation of unidimensional cell growth; LOCATED IN: nucleolus, cytoskeleton; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 3 (TAIR:AT5G58360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68419 : 88.0) no description available & (reliability: 183.4) & (original description: Putative OFP1, Description = Ovate family protein 1, PFAM = PF04844;PF13724)' T '33.99' 'development.unspecified' 'niben044scf00028783ctg002_80-5988' '(at1g20640 : 791.0) Plant regulator RWP-RK family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G76350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|65798 : 83.2) no description available & (reliability: 1582.0) & (original description: Putative NLP4, Description = Protein NLP4, PFAM = PF02042;PF00564)' T '33.99' 'development.unspecified' 'niben044scf00028859ctg008_103-16350' '(at1g71270 : 1093.0) Encodes a homolog of the yeast Vps52p/SAC2. Involved in pollen tube germination and growth. Located in multiple endomembrane organelles including the golgi. The yeast protein has been shown to be located at the late Golgi and to function in a complex involved in retrograde trafficking of vesicles between the early endosomal compartment and the trans-Golgi network.; POKY POLLEN TUBE (POK); CONTAINS InterPro DOMAIN/s: Vps52/Sac2 (InterPro:IPR007258); BEST Arabidopsis thaliana protein match is: Vps52 / Sac2 family (TAIR:AT1G71300.1); Has 820 Blast hits to 773 proteins in 240 species: Archae - 10; Bacteria - 70; Metazoa - 261; Fungi - 156; Plants - 82; Viruses - 2; Other Eukaryotes - 239 (source: NCBI BLink). & (gnl|cdd|37172 : 781.0) no description available & (gnl|cdd|67733 : 566.0) no description available & (reliability: 2186.0) & (original description: Putative VPS52, Description = Vacuolar protein sorting-associated protein 52 A, PFAM = PF04129)' T '33.99' 'development.unspecified' 'niben044scf00029274ctg003_1-6093' '(at4g32551 : 205.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (gnl|cdd|29257 : 100.0) no description available & (gnl|cdd|35487 : 98.0) no description available & (reliability: 410.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben044scf00029274ctg004_1-4691' '(at4g32551 : 103.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (reliability: 206.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF08513)' T '33.99' 'development.unspecified' 'niben044scf00029554ctg007_1-18650' '(at3g02310 : 269.0) MADS-box protein, binds K domain of AG in vivo; SEPALLATA 2 (SEP2); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7363 Blast hits to 7362 proteins in 916 species: Archae - 3; Bacteria - 0; Metazoa - 630; Fungi - 305; Plants - 6350; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (q03489|agl9_pethy : 256.0) Agamous-like MADS-box protein AGL9 homolog (Floral homeotic protein FBP2) (Floral-binding protein 2) - Petunia hybrida (Petunia) & (gnl|cdd|29020 : 125.0) no description available & (gnl|cdd|35238 : 104.0) no description available & (reliability: 538.0) & (original description: Putative 37500, Description = Developmental protein SEPALLATA 2, PFAM = PF01486;PF00319)' T '33.99' 'development.unspecified' 'niben044scf00029613ctg027_11021-14690' '(at1g61110 : 279.0) NAC domain containing protein 25 (NAC025); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 2 (TAIR:AT3G15510.1); Has 3019 Blast hits to 3014 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3011; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q52qh4|nac68_orysa : 250.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 220.0) no description available & (reliability: 558.0) & (original description: Putative NAC5, Description = NAC family transcription factor 5, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben044scf00029710ctg000_999-6315' '(at5g23660 : 231.0) homolog of the Medicago nodulin MTN3; homolog of Medicago truncatula MTN3 (MTN3); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT3G48740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36836 : 221.0) no description available & (gnl|cdd|86234 : 91.3) no description available & (reliability: 462.0) & (original description: Putative SWEET15, Description = Bidirectional sugar transporter SWEET15, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben044scf00029882ctg001_850-5104' '(at1g21460 : 240.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT5G53190.1); Has 988 Blast hits to 930 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 221; Fungi - 0; Plants - 643; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36836 : 178.0) no description available & (gnl|cdd|86234 : 82.1) no description available & (reliability: 480.0) & (original description: Putative PGSC0003DMG400045507, Description = Bidirectional sugar transporter SWEET, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben044scf00029896ctg003_22570-34555' '(at5g12130 : 389.0) PIGMENT DEFECTIVE 149 (PDE149); CONTAINS InterPro DOMAIN/s: Integral membrane protein TerC (InterPro:IPR005496), Integral membrane protein TerC, riboswitch-linked (InterPro:IPR022369); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31202 : 149.0) no description available & (reliability: 778.0) & (original description: Putative TERC, Description = Thylakoid membrane protein TERC, chloroplastic, PFAM = PF03741)' T '33.99' 'development.unspecified' 'niben044scf00030172ctg000_1469-18104' '(at4g00800 : 1380.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type (InterPro:IPR001841), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024); Has 298 Blast hits to 228 proteins in 78 species: Archae - 0; Bacteria - 17; Metazoa - 93; Fungi - 89; Plants - 34; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|37290 : 205.0) no description available & (reliability: 2760.0) & (original description: Putative glysoja_013096, Description = Vacuolar protein sorting-associated protein 8 like, PFAM = PF12816;PF12894;PF00637)' T '33.99' 'development.unspecified' 'niben044scf00030567ctg002_5820-9793' '(at4g00150 : 280.0) HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 197.0) no description available & (q5bn23|rga1_bracm : 95.5) DELLA protein RGA1 (RGA-like protein 1) (BrRGA1) - Brassica campestris (Field mustard) & (reliability: 560.0) & (original description: Putative Scl1, Description = Scl1 protein, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben044scf00030654ctg003_24329-43229' '(at2g34780 : 149.0) Encodes a novel protein of unknown function that is essential for embryonic development. Severe loss of function alleles are embryo lethal. Analysis of a partial loss of function allele indicates a role for EMB1611 in regulation of endoreduplication and maintenance of meristem cell fate. It appears to be required for maintaining the CLV-WUS regulatory pathway.; MATERNAL EFFECT EMBRYO ARREST 22 (MEE22); INVOLVED IN: negative regulation of DNA endoreduplication, meristem structural organization, embryo development ending in seed dormancy, maintenance of meristem identity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. & (gnl|cdd|35383 : 86.4) no description available & (reliability: 298.0) & (original description: Putative , Description = Putative nucleoprotein TPR-like, PFAM = )' T '33.99' 'development.unspecified' 'niben044scf00031183ctg005_1-4190' '(at3g11980 : 295.0) Similar to fatty acid reductases.; MALE STERILITY 2 (MS2); FUNCTIONS IN: fatty-acyl-CoA reductase (alcohol-forming) activity, oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor; INVOLVED IN: microsporogenesis, pollen exine formation; LOCATED IN: chloroplast; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Male sterility (InterPro:IPR004262), NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 6 (TAIR:AT3G56700.1); Has 2390 Blast hits to 2358 proteins in 427 species: Archae - 4; Bacteria - 606; Metazoa - 985; Fungi - 290; Plants - 282; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (gnl|cdd|36435 : 235.0) no description available & (gnl|cdd|87425 : 124.0) no description available & (reliability: 590.0) & (original description: Putative ms2, Description = Fatty acyl-CoA reductase 2, PFAM = PF03015;PF07993)' T '33.99' 'development.unspecified' 'niben044scf00031259ctg000_77-7082' '(at1g55540 : 184.0) embryo defective 1011 (emb1011); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative LNO1, Description = Nuclear pore complex protein NUP214, PFAM = )' T '33.99' 'development.unspecified' 'niben044scf00031655ctg004_5986-8645' '(at4g00650 : 142.0) Encodes a major determinant of natural variation in Arabidopsis flowering time. Dominant alleles of FRI confer a vernalization requirement causing plants to overwinter vegetatively. Many early flowering accessions carry loss-of-function fri alleles .Twenty distinct haplotypes that contain non-functional FRI alleles have been identified and the distribution analyzed in over 190 accessions. The common lab strains- Col and Ler each carry loss of function mutations in FRI.; FRIGIDA (FRI); CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT5G48385.1); Has 841 Blast hits to 841 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 841; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|71337 : 109.0) no description available & (reliability: 284.0) & (original description: Putative FRI, Description = FRIGIDA-like protein, PFAM = PF07899)' T '33.99' 'development.unspecified' 'niben044scf00032088ctg006_2960-6923' '(at2g02450 : 325.0) NAC domain containing protein 35 (NAC035); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 94 (TAIR:AT5G39820.1); Has 5401 Blast hits to 4721 proteins in 140 species: Archae - 0; Bacteria - 7; Metazoa - 144; Fungi - 68; Plants - 2924; Viruses - 5; Other Eukaryotes - 2253 (source: NCBI BLink). & (gnl|cdd|66085 : 205.0) no description available & (q7f2l3|nac48_orysa : 173.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (reliability: 650.0) & (original description: Putative NAC035, Description = NAC domain-containing protein 35, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben044scf00032287ctg002_1-4689' '(at4g33270 : 501.0) putative cdc20 protein (CDC20.1); CDC20.1; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT4G33260.1); Has 49595 Blast hits to 24757 proteins in 709 species: Archae - 60; Bacteria - 7548; Metazoa - 19325; Fungi - 10981; Plants - 5978; Viruses - 0; Other Eukaryotes - 5703 (source: NCBI BLink). & (gnl|cdd|35526 : 372.0) no description available & (gnl|cdd|29257 : 111.0) no description available & (reliability: 982.0) & (original description: Putative fzy, Description = Anaphase-promoting complex subunit cdc20, PFAM = PF12894;PF00400)' T '33.99' 'development.unspecified' 'niben044scf00032382ctg001_21486-28024' '(at4g20270 : 1002.0) Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function.; BARELY ANY MERISTEM 3 (BAM3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: regulation of meristem growth, protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, leaf development, floral organ development; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G65700.2); Has 219938 Blast hits to 139586 proteins in 4977 species: Archae - 151; Bacteria - 21929; Metazoa - 70277; Fungi - 10656; Plants - 90391; Viruses - 423; Other Eukaryotes - 26111 (source: NCBI BLink). & (p93194|rpk1_iponi : 445.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 298.0) no description available & (gnl|cdd|87344 : 159.0) no description available & (reliability: 2004.0) & (original description: Putative BAM3, Description = Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3, PFAM = PF00560;PF08263;PF00069;PF13855)' T '33.99' 'development.unspecified' 'niben044scf00032670ctg008_12576-19103' '(at2g27040 : 762.0) AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens.; ARGONAUTE 4 (AGO4); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Argonaute family protein (TAIR:AT5G21150.1). & (gnl|cdd|36259 : 492.0) no description available & (gnl|cdd|72942 : 322.0) no description available & (reliability: 1500.0) & (original description: Putative AGO4, Description = Eukaryotic translation initiation factor 2c, putative, PFAM = PF02170;PF08699;PF16486;PF02171;PF02171)' T '33.99' 'development.unspecified' 'niben044scf00033230ctg016_14223-18177' '(at4g21150 : 207.0) HAPLESS 6 (HAP6); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: response to cold, protein amino acid terminal N-glycosylation; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribophorin II (InterPro:IPR008814). & (gnl|cdd|86956 : 154.0) no description available & (reliability: 414.0) & (original description: Putative HAP6, Description = Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2, PFAM = PF05817)' T '33.99' 'development.unspecified' 'niben044scf00033464ctg001_1-3948' '(at4g00090 : 226.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: periodic tryptophan protein 2 (TAIR:AT1G15440.2); Has 19942 Blast hits to 11235 proteins in 520 species: Archae - 42; Bacteria - 5638; Metazoa - 5982; Fungi - 4099; Plants - 1742; Viruses - 0; Other Eukaryotes - 2439 (source: NCBI BLink). & (gnl|cdd|37307 : 172.0) no description available & (reliability: 452.0) & (original description: Putative At4g00090, Description = F6N15.8-like protein, PFAM = PF00400)' T '33.99' 'development.unspecified' 'niben044scf00033724ctg003_6010-11560' '(at2g33430 : 211.0) differentiation and greening-like 1 (DAL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: plastid organization, endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA); LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT1G32580.1); Has 251 Blast hits to 228 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 251; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q38732|dag_antma : 99.4) DAG protein, chloroplast precursor - Antirrhinum majus (Garden snapdragon) & (reliability: 422.0) & (original description: Putative MORF2, Description = Multiple organellar RNA editing factor 2, chloroplastic, PFAM = )' T '33.99' 'development.unspecified' 'niben044scf00034053ctg001_1-1612' '(at5g27030 : 192.0) TOPLESS-related 3 (TPR3); FUNCTIONS IN: protein binding; INVOLVED IN: primary shoot apical meristem specification; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TOPLESS-related 2 (TAIR:AT3G16830.1). & (reliability: 384.0) & (original description: Putative ASP1, Description = Topless-related protein 1, PFAM = )' T '33.99' 'development.unspecified' 'niben044scf00034990ctg010_1-8700' '(at1g48410 : 1508.0) Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus.; ARGONAUTE 1 (AGO1); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT5G43810.2). & (gnl|cdd|36259 : 847.0) no description available & (gnl|cdd|72942 : 552.0) no description available & (reliability: 3016.0) & (original description: Putative AGO1A, Description = Protein argonaute 1A, PFAM = PF08699;PF12764;PF02171;PF16487;PF16488;PF02170;PF16486)' T '33.99' 'development.unspecified' 'niben044scf00035070ctg000_990-4290' '(at1g74940 : 116.0) Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT1G19200.1); Has 483 Blast hits to 483 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 483; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68153 : 82.7) no description available & (reliability: 232.0) & (original description: Putative PGSC0003DMG400025721, Description = , PFAM = PF04570)' T '33.99' 'development.unspecified' 'niben044scf00036003ctg001_12176-18984' '(gnl|cdd|35383 : 162.0) no description available & (at5g41790 : 141.0) encodes a protein that physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. expression is not regulated by light.; COP1-interactive protein 1 (CIP1); FUNCTIONS IN: protein binding; INVOLVED IN: regulation of protein import into nucleus; LOCATED IN: cytoskeleton, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G64330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31389 : 92.4) no description available & (reliability: 282.0) & (original description: Putative PGSC0003DMG400012303, Description = Putative myosin-4-like, PFAM = PF07765)' T '33.99' 'development.unspecified' 'niben044scf00036083ctg004_5178-11742' '(at3g10490 : 280.0) NAC domain containing protein 52 (NAC052); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, pollen development; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 50 (TAIR:AT3G10480.1); Has 3394 Blast hits to 3360 proteins in 132 species: Archae - 4; Bacteria - 13; Metazoa - 65; Fungi - 17; Plants - 3017; Viruses - 4; Other Eukaryotes - 274 (source: NCBI BLink). & (gnl|cdd|66085 : 202.0) no description available & (q7gcl7|nac74_orysa : 172.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 560.0) & (original description: Putative AIF, Description = NAC domain-containing protein 78, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben044scf00036083ctg004_5193-11164' '(at3g10490 : 280.0) NAC domain containing protein 52 (NAC052); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, pollen development; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 50 (TAIR:AT3G10480.1); Has 3394 Blast hits to 3360 proteins in 132 species: Archae - 4; Bacteria - 13; Metazoa - 65; Fungi - 17; Plants - 3017; Viruses - 4; Other Eukaryotes - 274 (source: NCBI BLink). & (gnl|cdd|66085 : 201.0) no description available & (q7gcl7|nac74_orysa : 172.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 560.0) & (original description: Putative NH8, Description = Nam-like protein 8, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben044scf00036568ctg001_3953-11255' '(at1g13980 : 2295.0) Encodes a GDP/GTP exchange factor for small G-proteins of the ADP ribosylation factor (RAF) class, and as regulator of intracellular trafficking. Homologous to Sec7p and YEC2 from yeast. Involved in the specification of apical-basal pattern formation. Essential for cell division, expansion and adhesion. It appears that heteotypic binding between the DCB and C-terminal domains of two GNOM proteins is required for membrane association, however, GNOM appears to exist predominantly as a heterodimer formed through DCB-DCB interactions.; GNOM (GN); FUNCTIONS IN: protein homodimerization activity, GTP:GDP antiporter activity; INVOLVED IN: in 13 processes; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904); BEST Arabidopsis thaliana protein match is: GNOM-like 1 (TAIR:AT5G39500.1). & (gnl|cdd|36146 : 1559.0) no description available & (gnl|cdd|65184 : 271.0) no description available & (reliability: 4590.0) & (original description: Putative GN, Description = ARF guanine-nucleotide exchange factor GNOM, PFAM = PF01369;PF12783)' T '33.99' 'development.unspecified' 'niben044scf00036731ctg000_10363-17395' '(at3g49660 : 469.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: G-protein coupled receptor protein signaling pathway; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 118516 Blast hits to 43755 proteins in 1024 species: Archae - 92; Bacteria - 12360; Metazoa - 47439; Fungi - 25856; Plants - 15887; Viruses - 9; Other Eukaryotes - 16873 (source: NCBI BLink). & (gnl|cdd|35487 : 301.0) no description available & (gnl|cdd|29257 : 272.0) no description available & (p93107|pf20_chlre : 124.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 938.0) & (original description: Putative WDR5A, Description = COMPASS-like H3K4 histone methylase component WDR5A, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben044scf00036880ctg000_1-3036' '(at5g04410 : 84.3) NAC family member, functions as a transcriptional activator, regulates flavonoid biosynthesis under high light.; NAC domain containing protein 2 (NAC2); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 53 (TAIR:AT3G10500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66085 : 84.2) no description available & (reliability: 168.6) & (original description: Putative PGSC0003DMG400008178, Description = , PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben044scf00037233ctg013_10088-14086' '(at3g54320 : 274.0) WRINKLED1 encodes transcription factor of the AP2/ERWEBP class. Protein has two plant-specific (AP2/EREB) DNA-binding domains and is involved in the control of storage compound biosynthesis in Arabidopsis. Mutants have wrinkled seed phenotype, due to a defect in the incorporation of sucrose and glucose into triacylglycerols. Transgenic sGsL plants (21-day-old) grown on 6% sucrose for 24 hours had 2-fold increase in levels of expressions (sGsL line carries a single copy of T-DNA containing the Spomin::GUS-Spomin::LUC dual reporter genes in the upper arm of chromosome 5 of ecotype Col-0. The sporamin .minimal. promoter directs sugar-inducible expression of the LUC and GUS reporters in leaves). Regulation by LEC2 promotes fatty acid accumulation during seed maturation.; WRINKLED 1 (WRI1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G79700.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 248.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 87.6) no description available & (reliability: 548.0) & (original description: Putative WRI1, Description = WRI1, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'niben044scf00037764ctg000_4271-8732' '(at5g62370 : 102.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G65560.1); Has 62242 Blast hits to 13624 proteins in 288 species: Archae - 4; Bacteria - 32; Metazoa - 555; Fungi - 723; Plants - 59384; Viruses - 0; Other Eukaryotes - 1544 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative si618080f12(37), Description = Vacuolar protein sorting-associated protein 8 like, PFAM = PF12854;PF12854)' T '33.99' 'development.unspecified' 'niben044scf00037942ctg003_1311-7033' '(at5g65700 : 1278.0) Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM2,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM1 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs.; BARELY ANY MERISTEM 1 (BAM1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT3G49670.1). & (p93194|rpk1_iponi : 405.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 315.0) no description available & (gnl|cdd|87344 : 166.0) no description available & (reliability: 2428.0) & (original description: Putative har1, Description = Non-specific serine/threonine protein kinase, PFAM = PF13516;PF00560;PF00069)' T '33.99' 'development.unspecified' 'niben044scf00038001ctg003_1361-7498' '(at5g04410 : 302.0) NAC family member, functions as a transcriptional activator, regulates flavonoid biosynthesis under high light.; NAC domain containing protein 2 (NAC2); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 53 (TAIR:AT3G10500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66085 : 128.0) no description available & (q7gcl7|nac74_orysa : 118.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 604.0) & (original description: Putative NAC078, Description = NAC domain-containing protein 78, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben044scf00039215ctg013_1343-5106' '(at2g28120 : 754.0) Major facilitator superfamily protein; INVOLVED IN: N-terminal protein myristoylation, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G39210.1); Has 3034 Blast hits to 2940 proteins in 680 species: Archae - 38; Bacteria - 1235; Metazoa - 42; Fungi - 225; Plants - 608; Viruses - 0; Other Eukaryotes - 886 (source: NCBI BLink). & (gnl|cdd|70288 : 289.0) no description available & (reliability: 1508.0) & (original description: Putative At2g28120, Description = At2g28120/F24D13.9, PFAM = PF06813)' T '33.99' 'development.unspecified' 'niben044scf00040302ctg009_2398-7787' '(at1g80530 : 665.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G34950.1); Has 2493 Blast hits to 2437 proteins in 753 species: Archae - 26; Bacteria - 1395; Metazoa - 19; Fungi - 170; Plants - 599; Viruses - 0; Other Eukaryotes - 284 (source: NCBI BLink). & (gnl|cdd|70288 : 294.0) no description available & (reliability: 1330.0) & (original description: Putative BnaA07g19930D, Description = BnaA07g19930D protein, PFAM = PF06813)' T '33.99' 'development.unspecified' 'niben044scf00041053ctg000_7417-16654' '(at3g24440 : 464.0) Encodes Vernalization Insensitive 3-like 1 (VIL1). VIL1 is involved in the photoperiod and vernalization of Arabidopsis by regulating expression of the related floral repressors Flowering Locus C (FLC) and Flowering Locus M (FLM). VIL1, along with VIN3 (Vernalization Insensitive 3) is necessary for the chromatin modification to FLC and FLM.; VERNALIZATION 5 (VRN5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: histone methylation, chromatin modification, vernalization response, regulation of flower development; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423, plant (InterPro:IPR004082), Fibronectin, type III-like fold (InterPro:IPR008957), Fibronectin, type III (InterPro:IPR003961); BEST Arabidopsis thaliana protein match is: Fibronectin type III domain-containing protein (TAIR:AT5G57380.1); Has 273 Blast hits to 232 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 0; Plants - 265; Viruses - 1; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 928.0) & (original description: Putative VIL1, Description = VIN3-like protein 1, PFAM = PF07227)' T '33.99' 'development.unspecified' 'niben044scf00041419ctg005_22049-24610' '(at5g46700 : 214.0) Encodes a transmembrane protein of the tetraspanin (TET) family, one of 17 members found in Arabidopsis. Double mutant analysis showed that TRN1 and TRN2 act in the same pathway. Required for the maintenance of both the radial pattern of tissue differentiation in the root and for the subsequent circumferential pattern within the epidermis.; TORNADO 2 (TRN2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: radial pattern formation, meristem structural organization, aging, leaf vascular tissue pattern formation, root morphogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 32 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499); BEST Arabidopsis thaliana protein match is: tetraspanin2 (TAIR:AT2G19580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative Os09g0425900, Description = Os09g0425900 protein, PFAM = PF00335)' T '33.99' 'development.unspecified' 'niben044scf00042625ctg001_11680-37076' '(at5g15540 : 1833.0) Encodes Adherin SCC2. Essential for viability. Required for normal seed development. Plays a role in the establishment of sister-chromatid cohesion and chromosome organization during meiosis.; EMBRYO DEFECTIVE 2773 (EMB2773); FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: centromere complex assembly, sister chromatid cohesion, embryo development ending in seed dormancy, meiotic sister chromatid cohesion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Armadillo-type fold (InterPro:IPR016024), Zinc finger, PHD-finger (InterPro:IPR019787). & (gnl|cdd|36238 : 1006.0) no description available & (reliability: 3666.0) & (original description: Putative EMB2773, Description = Sister chromatid cohesion 2, PFAM = PF12830;PF12765)' T '33.99' 'development.unspecified' 'niben044scf00044837ctg003_1358-13577' '(at5g22640 : 177.0) EMB1211 is a MORN (multiple membrane occupation and recognition nexus) motif containing protein involved in embryo development and chloroplast biogenesis.; embryo defective 1211 (emb1211); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chloroplast organization, embryo development, embryo development ending in seed dormancy; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MORN motif (InterPro:IPR003409). & (reliability: 354.0) & (original description: Putative emb1211, Description = Membrane Occupation and Recognition Nexus repeat-containing family protein, PFAM = )' T '33.99' 'development.unspecified' 'niben044scf00044928ctg001_480-3505' '(at5g01840 : 92.8) Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. Functions as a transcriptional repressor that suppresses cell elongation.; ovate family protein 1 (OFP1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: N-terminal protein myristoylation, regulation of unidimensional cell growth; LOCATED IN: nucleolus, cytoskeleton; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 3 (TAIR:AT5G58360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68419 : 87.2) no description available & (reliability: 181.8) & (original description: Putative OFP1, Description = Ovate family protein 1, PFAM = PF13724;PF04844)' T '33.99' 'development.unspecified' 'niben044scf00045302ctg003_3950-7742' '(p29162|ntp3_tobac : 942.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (at1g55560 : 760.0) SKU5 similar 14 (sks14); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 13 (TAIR:AT3G13400.1); Has 5179 Blast hits to 5121 proteins in 953 species: Archae - 12; Bacteria - 1596; Metazoa - 272; Fungi - 1874; Plants - 1269; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (gnl|cdd|36477 : 579.0) no description available & (gnl|cdd|87357 : 145.0) no description available & (reliability: 1510.0) & (original description: Putative p303, Description = 1-ascorbate oxidase, PFAM = PF07731;PF07732;PF00394)' T '33.99' 'development.unspecified' 'niben044scf00045671ctg005_187-2547' '(at3g43660 : 212.0) Vacuolar iron transporter (VIT) family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217); BEST Arabidopsis thaliana protein match is: Vacuolar iron transporter (VIT) family protein (TAIR:AT3G43630.1); Has 1844 Blast hits to 1835 proteins in 644 species: Archae - 71; Bacteria - 1261; Metazoa - 0; Fungi - 84; Plants - 213; Viruses - 0; Other Eukaryotes - 215 (source: NCBI BLink). & (gnl|cdd|39674 : 202.0) no description available & (p16313|no21_soybn : 159.0) Nodulin 21 (N-21) - Glycine max (Soybean) & (gnl|cdd|29963 : 143.0) no description available & (reliability: 424.0) & (original description: Putative At3g43660, Description = Vacuolar iron transporter homolog 4, PFAM = PF01988;PF01988)' T '33.99' 'development.unspecified' 'niben044scf00049024ctg002_1110-3153' '(at2g45800 : 115.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT3G61230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36913 : 83.2) no description available & (reliability: 230.0) & (original description: Putative atl2, Description = Pollen-specific protein SF3, PFAM = PF00412)' T '33.99' 'development.unspecified' 'niben044scf00049334ctg007_1-4364' '(at2g25660 : 892.0) embryo defective 2410 (emb2410); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF490 (InterPro:IPR007452); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1784.0) & (original description: Putative emb2410, Description = Embryo defective 2410 protein, PFAM = )' T '33.99' 'development.unspecified' 'niben044scf00049334ctg008_1228-4537' '(at2g25660 : 283.0) embryo defective 2410 (emb2410); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF490 (InterPro:IPR007452); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 566.0) & (original description: Putative emb2410, Description = Embryo defective 2410 protein, PFAM = )' T '33.99' 'development.unspecified' 'niben044scf00049515ctg002_1-2153' '(at1g06920 : 92.4) ovate family protein 4 (OFP4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 2 (TAIR:AT2G30400.1); Has 524 Blast hits to 514 proteins in 51 species: Archae - 0; Bacteria - 6; Metazoa - 52; Fungi - 2; Plants - 429; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|68419 : 90.7) no description available & (reliability: 184.8) & (original description: Putative OFP1, Description = Ovate family protein 1, PFAM = PF04844;PF13724)' T '33.99' 'development.unspecified' 'niben044scf00050167ctg002_29753-36025' '(at5g57390 : 363.0) Encodes a member of the AP2 family of transcriptional regulators.May be involved in germination and seedling growth. Mutants are resistant to ABA analogs and are resistant to high nitrogen concentrations.essential for the developmental transition between the embryonic and vegetative phases in plants.Overexpression results in the formation of somatic embryos on cotyledons.; AINTEGUMENTA-like 5 (AIL5); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G20840.1); Has 9099 Blast hits to 5771 proteins in 325 species: Archae - 0; Bacteria - 38; Metazoa - 238; Fungi - 101; Plants - 7378; Viruses - 6; Other Eukaryotes - 1338 (source: NCBI BLink). & (q8lsn2|bbm2_brana : 327.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (gnl|cdd|47695 : 94.2) no description available & (reliability: 726.0) & (original description: Putative AIL5, Description = AP2-like ethylene-responsive transcription factor AIL5, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'niben044scf00052542ctg000_7241-13689' '(at5g56280 : 403.0) one of two genes encoding subunit 6 of COP9 signalosome complex. Protein contains a MPR1p and PAD1p N-terminal (MPN) domain at the N-terminal region and belongs to the Mov34 superfamily. Mutant and antisense expression result in a number of developmental defects and in ubiquitin/proteasome-mediated protein degradation.; COP9 signalosome subunit 6A (CSN6A); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: COP9 signalosome subunit 6B (TAIR:AT4G26430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38260 : 338.0) no description available & (reliability: 806.0) & (original description: Putative CSN6A, Description = COP9 signalosome complex subunit 6a, PFAM = PF13012;PF01398)' T '33.99' 'development.unspecified' 'niben044scf00053320ctg000_1819-10072' '(at4g00730 : 711.0) Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development; ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29139 : 183.0) no description available & (reliability: 1418.0) & (original description: Putative HDG1, Description = Homeobox-leucine zipper protein HDG1, PFAM = PF00046;PF01852)' T '33.99' 'development.unspecified' 'niben044scf00053594ctg002_1-2876' '(at3g47090 : 182.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 208488 Blast hits to 131556 proteins in 4837 species: Archae - 167; Bacteria - 21304; Metazoa - 66210; Fungi - 9769; Plants - 86245; Viruses - 308; Other Eukaryotes - 24485 (source: NCBI BLink). & (p93194|rpk1_iponi : 158.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 83.2) no description available & (reliability: 334.0) & (original description: Putative TCM_031965, Description = Serine-threonine protein kinase, PFAM = PF00560;PF08263;PF13855;PF13855)' T '33.99' 'development.unspecified' 'niben044scf00053804ctg001_241-6587' '(at3g24560 : 519.0) novel gene involved in embryogenesis; RASPBERRY 3 (RSY3); CONTAINS InterPro DOMAIN/s: PP-loop (InterPro:IPR011063); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30179 : 184.0) no description available & (reliability: 1038.0) & (original description: Putative RSY3, Description = Protein raspberry 3, PFAM = PF01171)' T '33.99' 'development.unspecified' 'niben044scf00054926ctg003_2350-5683' '(at1g53230 : 208.0) Encodes a member of a recently identified plant transcription factor family that includes Teosinte branched 1, Cycloidea 1, and proliferating cell nuclear antigen (PCNA) factors, PCF1 and 2. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; "TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3" (TCP3); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor 4 (TAIR:AT3G15030.3); Has 1510 Blast hits to 1508 proteins in 333 species: Archae - 0; Bacteria - 12; Metazoa - 43; Fungi - 12; Plants - 1439; Viruses - 2; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|67262 : 121.0) no description available & (reliability: 416.0) & (original description: Putative TCP4, Description = Transcription factor TCP4, PFAM = PF03634)' T '33.99' 'development.unspecified' 'niben044scf00057613ctg000_103-6473' '(at3g24460 : 473.0) Serinc-domain containing serine and sphingolipid biosynthesis protein; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: TMS membrane protein/tumour differentially expressed protein (InterPro:IPR005016); BEST Arabidopsis thaliana protein match is: Serinc-domain containing serine and sphingolipid biosynthesis protein (TAIR:AT4G13345.1); Has 800 Blast hits to 764 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 443; Fungi - 147; Plants - 141; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|37803 : 164.0) no description available & (gnl|cdd|66988 : 163.0) no description available & (reliability: 918.0) & (original description: Putative MEE55, Description = Putative uncharacterized protein At4g13345, PFAM = PF03348;PF03348)' T '33.99' 'development.unspecified' 'niben044scf00058703ctg003_2392-7109' '(at5g48850 : 363.0) homologous to the wheat sulphate deficiency-induced gene sdi1. Expression in root and leaf is induced by sulfur starvation. Knockout mutants retained higher root and leaf sulfate concentrations, indicating a role in regulation of stored sulfate pools.; SULPHUR DEFICIENCY-INDUCED 1 (ATSDI1); FUNCTIONS IN: binding; INVOLVED IN: cellular response to sulfur starvation, regulation of sulfur utilization; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G04770.1); Has 255 Blast hits to 246 proteins in 34 species: Archae - 2; Bacteria - 37; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 726.0) & (original description: Putative SDI1, Description = Protein SULFUR DEFICIENCY-INDUCED 1, PFAM = PF13181)' T '33.99' 'development.unspecified' 'niben044scf00058801ctg001_5904-15131' '(at2g37560 : 410.0) Origin Recognition Complex subunit 2. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts strongly with all ORC subunits.; origin recognition complex second largest subunit 2 (ORC2); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 2 (InterPro:IPR007220); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38139 : 254.0) no description available & (gnl|cdd|86535 : 242.0) no description available & (reliability: 820.0) & (original description: Putative ORC2, Description = Origin of replication complex subunit 2, PFAM = PF04084;PF04084)' T '33.99' 'development.unspecified' 'niben044scf00059206ctg000_3199-6582' '(at3g28050 : 238.0) nodulin MtN21 /EamA-like transporter family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G40240.1); Has 1917 Blast hits to 1909 proteins in 293 species: Archae - 12; Bacteria - 576; Metazoa - 4; Fungi - 10; Plants - 1200; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 476.0) & (original description: Putative BnaC05g06010D, Description = BnaC05g06010D protein, PFAM = PF00892)' T '33.99' 'development.unspecified' 'niben044scf00060778ctg000_3420-7588' '(at2g02450 : 308.0) NAC domain containing protein 35 (NAC035); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 94 (TAIR:AT5G39820.1); Has 5401 Blast hits to 4721 proteins in 140 species: Archae - 0; Bacteria - 7; Metazoa - 144; Fungi - 68; Plants - 2924; Viruses - 5; Other Eukaryotes - 2253 (source: NCBI BLink). & (gnl|cdd|66085 : 213.0) no description available & (q7f2l3|nac48_orysa : 174.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (reliability: 616.0) & (original description: Putative NAC035, Description = NAC domain-containing protein 35, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben044scf00061516ctg000_705-6249' '(at5g43822 : 198.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative OSJNBa0057L21.18, Description = Os10g0566900 protein, PFAM = PF15011)' T '33.99' 'development.unspecified' 'niben101ctg13774_1-2170' '(at5g64530 : 218.0) xylem NAC domain 1 (XND1); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 25 (TAIR:AT1G61110.1); Has 2741 Blast hits to 2738 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2741; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 135.0) no description available & (q52qh4|nac68_orysa : 108.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 436.0) & (original description: Putative NAC104, Description = NAC domain-containing protein 104, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101ctg13864_495-2224' '(at2g22640 : 120.0) Component of the WAVE protein complex which act as activators of ARP2/3 complex involved in actin nucleation. Required for trichome morphogenesis. Required for accumulation of SCAR1 protein in vivo. Selectively stabilizes SCAR2.; BRICK1 (BRK1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8rw98|brk1_maize : 114.0) Protein BRICK1 - Zea mays (Maize) & (reliability: 240.0) & (original description: Putative BRK1, Description = Protein BRICK 1, PFAM = )' T '33.99' 'development.unspecified' 'niben101ctg15807_1-2966' '(at4g27410 : 355.0) Encodes a NAC transcription factor induced in response to dessication. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response.; RESPONSIVE TO DESICCATION 26 (RD26); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 19 (TAIR:AT1G52890.1); Has 2991 Blast hits to 2983 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2991; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 231.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 199.0) no description available & (reliability: 710.0) & (original description: Putative nac, Description = NAC transcription factor, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101ctg15860_1-3379' '(at2g43000 : 260.0) NAC domain containing protein 42 (NAC042); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT3G12910.1); Has 2932 Blast hits to 2927 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2932; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 176.0) no description available & (q52qh4|nac68_orysa : 171.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 520.0) & (original description: Putative NAC10, Description = NAC protein 10, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101ctg16479_3199-10571' '(at2g02910 : 527.0) Protein of unknown function (DUF616); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF616 (InterPro:IPR006852); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF616) (TAIR:AT1G34550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68342 : 444.0) no description available & (reliability: 956.0) & (original description: Putative At2g02910, Description = AT2G02910 protein, PFAM = PF04765)' T '33.99' 'development.unspecified' 'niben101scf00046_241828-249174' '(at3g01600 : 279.0) NAC domain containing protein 44 (NAC044); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 85 (TAIR:AT5G14490.1); Has 1967 Blast hits to 1962 proteins in 64 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1967; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 103.0) no description available & (reliability: 558.0) & (original description: Putative NAC6, Description = NAC domain protein, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf00048_8312-16308' '(at3g44290 : 219.0) NAC domain containing protein 60 (NAC060); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 89 (TAIR:AT5G22290.1); Has 2819 Blast hits to 2813 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2819; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 186.0) no description available & (q7gcl7|nac74_orysa : 171.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 438.0) & (original description: Putative NAC1, Description = NAC domain-containing protein 78, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf00051_391098-403440' '(gnl|cdd|71337 : 200.0) no description available & (at5g48385 : 151.0) FRIGIDA-like protein; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT4G14900.1); Has 1269 Blast hits to 1187 proteins in 101 species: Archae - 0; Bacteria - 22; Metazoa - 72; Fungi - 9; Plants - 1133; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative PGSC0003DMG400022488, Description = Putative myosin-10-like, PFAM = PF07899;PF07899;PF07899)' T '33.99' 'development.unspecified' 'niben101scf00063_773507-776859' '(at5g61430 : 356.0) NAC domain containing protein 100 (NAC100); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 80 (TAIR:AT5G07680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5cd17|nac77_orysa : 213.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (gnl|cdd|66085 : 209.0) no description available & (reliability: 712.0) & (original description: Putative nac1, Description = NAC domain-containing protein 1, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf00065_36902-41395' '(at1g75900 : 392.0) GDSL-like Lipase/Acylhydrolase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G75880.2); Has 3444 Blast hits to 3405 proteins in 204 species: Archae - 0; Bacteria - 282; Metazoa - 0; Fungi - 26; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|58514 : 388.0) no description available & (p40603|apg_brana : 273.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 784.0) & (original description: Putative EXL3, Description = GDSL esterase/lipase EXL3, PFAM = PF00657)' T '33.99' 'development.unspecified' 'niben101scf00069_355074-362088' '(at3g49660 : 461.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: G-protein coupled receptor protein signaling pathway; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 118516 Blast hits to 43755 proteins in 1024 species: Archae - 92; Bacteria - 12360; Metazoa - 47439; Fungi - 25856; Plants - 15887; Viruses - 9; Other Eukaryotes - 16873 (source: NCBI BLink). & (gnl|cdd|35487 : 290.0) no description available & (gnl|cdd|29257 : 263.0) no description available & (p93107|pf20_chlre : 120.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 922.0) & (original description: Putative WDR5, Description = WD repeat-containing protein 5, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf00072_765381-769648' '(at1g65380 : 643.0) Receptor-like protein containing leucine-rich repeats. Regulates both meristem and organ development in Arabidopsis.; clavata 2 (CLV2); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G63930.1); Has 98590 Blast hits to 28947 proteins in 1129 species: Archae - 27; Bacteria - 4991; Metazoa - 24209; Fungi - 1144; Plants - 60409; Viruses - 6; Other Eukaryotes - 7804 (source: NCBI BLink). & (p93194|rpk1_iponi : 198.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 114.0) no description available & (reliability: 1286.0) & (original description: Putative CLV2, Description = Leucine-rich repeat receptor-like protein CLAVATA2, PFAM = PF13516;PF13855)' T '33.99' 'development.unspecified' 'niben101scf00080_50098-62911' '(at4g07410 : 948.0) Transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT1G27470.1); Has 10654 Blast hits to 6476 proteins in 452 species: Archae - 14; Bacteria - 3757; Metazoa - 2166; Fungi - 2748; Plants - 788; Viruses - 0; Other Eukaryotes - 1181 (source: NCBI BLink). & (gnl|cdd|37259 : 483.0) no description available & (gnl|cdd|29257 : 83.1) no description available & (reliability: 1828.0) & (original description: Putative At1g27470, Description = Putative uncharacterized protein At1g27470, PFAM = PF00400)' T '33.99' 'development.unspecified' 'niben101scf00090_236134-241849' '(at1g45230 : 224.0) Protein of unknown function (DUF3223); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3223 (InterPro:IPR021602); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3223) (TAIR:AT3G46630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative DCL, Description = Protein DCL, chloroplastic, PFAM = PF11523)' T '33.99' 'development.unspecified' 'niben101scf00109_279350-282537' '(at2g33480 : 111.0) NAC domain containing protein 41 (NAC041); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 83 (TAIR:AT5G13180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q52qh4|nac68_orysa : 100.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 97.3) no description available & (reliability: 222.0) & (original description: Putative NH5, Description = Nam-like protein 5, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf00109_1064985-1070745' '(at3g01930 : 816.0) Major facilitator superfamily protein; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G14120.1); Has 2557 Blast hits to 2447 proteins in 764 species: Archae - 24; Bacteria - 1311; Metazoa - 10; Fungi - 268; Plants - 609; Viruses - 0; Other Eukaryotes - 335 (source: NCBI BLink). & (gnl|cdd|70288 : 294.0) no description available & (reliability: 1632.0) & (original description: Putative At5g14120, Description = Major facilitator protein, PFAM = PF06813)' T '33.99' 'development.unspecified' 'niben101scf00111_470440-489507' '(at3g56990 : 810.0) embryo sac development arrest 7 (EDA7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: megagametogenesis; LOCATED IN: nucleolus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), NUC153 (InterPro:IPR012580), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37532 : 678.0) no description available & (reliability: 1620.0) & (original description: Putative enp2, Description = Ribosome biogenesis protein enp2 homolog, PFAM = PF12894;PF08159)' T '33.99' 'development.unspecified' 'niben101scf00116_114062-117731' '(at1g18100 : 193.0) Encodes a member of the FT and TFL1 family of phosphatidylethanolamine-binding proteins. It is expressed in seeds and up-regulated in response to ABA. Loss of function mutants show decreased rate of germination in the presence of ABA. ABA dependent regulation is mediated by both ABI3 and ABI5. ABI5 promotes MFT expression, primarily in the radicle-hypocotyl transition zone and ABI3 suppresses it in the seed.; E12A11; CONTAINS InterPro DOMAIN/s: Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); BEST Arabidopsis thaliana protein match is: PEBP (phosphatidylethanolamine-binding protein) family protein (TAIR:AT5G03840.1); Has 2417 Blast hits to 2417 proteins in 371 species: Archae - 0; Bacteria - 118; Metazoa - 639; Fungi - 192; Plants - 1429; Viruses - 3; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|38556 : 184.0) no description available & (q9xh44|cet1_tobac : 162.0) CEN-like protein 1 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29585 : 146.0) no description available & (reliability: 386.0) & (original description: Putative MFT, Description = Protein MOTHER of FT and TFL1, PFAM = PF01161)' T '33.99' 'development.unspecified' 'niben101scf00121_11950-18180' '(p93340|gblp_nicpl : 594.0) Guanine nucleotide-binding protein subunit beta-like protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g18080 : 529.0) Encodes the Arabidopsis thaliana homolog of the tobacco WD-40 repeat ArcA gene.; ATARCA; FUNCTIONS IN: nucleotide binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosolic ribosome, chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B (TAIR:AT1G48630.1); Has 86693 Blast hits to 36128 proteins in 955 species: Archae - 98; Bacteria - 10140; Metazoa - 33986; Fungi - 19643; Plants - 11429; Viruses - 3; Other Eukaryotes - 11394 (source: NCBI BLink). & (gnl|cdd|35500 : 449.0) no description available & (gnl|cdd|29257 : 230.0) no description available & (reliability: 1058.0) & (original description: Putative ARCA, Description = Guanine nucleotide-binding protein subunit beta-like protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf00130_797395-813147' '(at4g32551 : 879.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (gnl|cdd|35487 : 216.0) no description available & (gnl|cdd|29257 : 212.0) no description available & (reliability: 1758.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF08513;PF00400;PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf00136_110412-114389' '(at5g61430 : 321.0) NAC domain containing protein 100 (NAC100); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 80 (TAIR:AT5G07680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5cd17|nac77_orysa : 213.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (gnl|cdd|66085 : 202.0) no description available & (reliability: 642.0) & (original description: Putative NAC92, Description = NAC domain-containing protein 92, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf00138_466960-471326' '(at1g79580 : 299.0) NAC-domain protein. Involved in root cap development. Involved in a regulatory feedback loop with FEZ. FEZ activates SMB in hte root cap daughter cells soon after division, and SMB in turn represses FEZ expression in these cells, thereby preventing further stem cell divisions.; SOMBRERO (SMB); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 70 (TAIR:AT4G10350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5z6b6|nac76_orysa : 274.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (gnl|cdd|66085 : 213.0) no description available & (reliability: 598.0) & (original description: Putative NAC76, Description = NAC domain-containing protein 76, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf00149_688749-692494' '(at2g21045 : 184.0) Rhodanese/Cell cycle control phosphatase superfamily protein; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: sulfurtransferase 18 (TAIR:AT5G66170.3); Has 3150 Blast hits to 3144 proteins in 1047 species: Archae - 52; Bacteria - 2382; Metazoa - 28; Fungi - 31; Plants - 181; Viruses - 0; Other Eukaryotes - 476 (source: NCBI BLink). & (gnl|cdd|36743 : 124.0) no description available & (p27626|din1_rapsa : 110.0) Senescence-associated protein DIN1 - Raphanus sativus (Radish) & (gnl|cdd|29073 : 81.6) no description available & (reliability: 368.0) & (original description: Putative STR18, Description = Thiosulfate sulfurtransferase 18, PFAM = PF00581)' T '33.99' 'development.unspecified' 'niben101scf00163_1739499-1744756' '(p49030|mgn_orysa : 281.0) Protein mago nashi homolog (Mago nashi-like protein) - Oryza sativa (Rice) & (at1g02140 : 270.0) MAGO NASHI (MAGO); FUNCTIONS IN: protein binding; INVOLVED IN: pollen tube guidance, sex determination, embryo development ending in seed dormancy; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mago nashi protein (InterPro:IPR004023); Has 476 Blast hits to 476 proteins in 200 species: Archae - 0; Bacteria - 0; Metazoa - 223; Fungi - 96; Plants - 76; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|38602 : 268.0) no description available & (gnl|cdd|66475 : 263.0) no description available & (reliability: 540.0) & (original description: Putative mago, Description = Protein mago nashi, PFAM = PF02792)' T '33.99' 'development.unspecified' 'niben101scf00163_2364340-2372953' '(at5g07590 : 761.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 672 Blast hits to 646 proteins in 166 species: Archae - 0; Bacteria - 97; Metazoa - 271; Fungi - 156; Plants - 85; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|39697 : 603.0) no description available & (reliability: 1522.0) & (original description: Putative WRAP73, Description = WD repeat-containing protein WRAP73, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf00167_280147-284291' '(at3g01930 : 781.0) Major facilitator superfamily protein; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G14120.1); Has 2557 Blast hits to 2447 proteins in 764 species: Archae - 24; Bacteria - 1311; Metazoa - 10; Fungi - 268; Plants - 609; Viruses - 0; Other Eukaryotes - 335 (source: NCBI BLink). & (gnl|cdd|70288 : 294.0) no description available & (reliability: 1562.0) & (original description: Putative Sb07g026140, Description = Putative uncharacterized protein Sb07g026140, PFAM = PF06813)' T '33.99' 'development.unspecified' 'niben101scf00168_377573-379315' '(at3g56100 : 91.7) Protein kinase expressed in meristematic cells. Phosphorylates AGL24.; meristematic receptor-like kinase (MRLK); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: inflorescence meristem receptor-like kinase 2 (TAIR:AT3G51740.1); Has 154347 Blast hits to 110289 proteins in 3296 species: Archae - 124; Bacteria - 13554; Metazoa - 45622; Fungi - 8090; Plants - 69121; Viruses - 344; Other Eukaryotes - 17492 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative PGSC0003DMG400005590, Description = Receptor like protein 15, putative, PFAM = PF00560;PF00560)' T '33.99' 'development.unspecified' 'niben101scf00176_54420-57893' '(q38732|dag_antma : 273.0) DAG protein, chloroplast precursor - Antirrhinum majus (Garden snapdragon) & (at1g11430 : 263.0) plastid developmental protein DAG, putative; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT3G06790.2); Has 252 Blast hits to 229 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 252; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative MORF9, Description = Multiple organellar RNA editing factor 9, chloroplastic, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf00180_1242294-1246255' '(at1g61040 : 514.0) Encodes a yeast Paf1C subunit homolog required for the expression of the MADS box gene FLC and other members of the FLC/MAF MADS-box gene family.; vernalization independence 5 (VIP5); FUNCTIONS IN: DNA binding; INVOLVED IN: positive regulation of transcription, DNA-dependent, negative regulation of flower development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plus-3 domain, subgroup (InterPro:IPR018144), Plus-3 (InterPro:IPR004343); Has 7244 Blast hits to 3723 proteins in 490 species: Archae - 2; Bacteria - 3364; Metazoa - 2087; Fungi - 627; Plants - 250; Viruses - 32; Other Eukaryotes - 882 (source: NCBI BLink). & (gnl|cdd|37613 : 252.0) no description available & (gnl|cdd|34887 : 108.0) no description available & (reliability: 1028.0) & (original description: Putative VIP5, Description = Protein RTF1 homolog, PFAM = PF03126)' T '33.99' 'development.unspecified' 'niben101scf00182_650062-654293' '(at5g20700 : 96.7) Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT1G74940.1); Has 476 Blast hits to 476 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 476; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative dl4870c, Description = BnaC07g19900D protein, PFAM = PF04570)' T '33.99' 'development.unspecified' 'niben101scf00185_436364-442686' '(at4g08300 : 415.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G44800.1); Has 3616 Blast hits to 3605 proteins in 598 species: Archae - 32; Bacteria - 1860; Metazoa - 4; Fungi - 2; Plants - 1222; Viruses - 0; Other Eukaryotes - 496 (source: NCBI BLink). & (reliability: 830.0) & (original description: Putative nlp1, Description = WAT1-related protein, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf00193_122726-130083' '(at1g13980 : 2252.0) Encodes a GDP/GTP exchange factor for small G-proteins of the ADP ribosylation factor (RAF) class, and as regulator of intracellular trafficking. Homologous to Sec7p and YEC2 from yeast. Involved in the specification of apical-basal pattern formation. Essential for cell division, expansion and adhesion. It appears that heteotypic binding between the DCB and C-terminal domains of two GNOM proteins is required for membrane association, however, GNOM appears to exist predominantly as a heterodimer formed through DCB-DCB interactions.; GNOM (GN); FUNCTIONS IN: protein homodimerization activity, GTP:GDP antiporter activity; INVOLVED IN: in 13 processes; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904); BEST Arabidopsis thaliana protein match is: GNOM-like 1 (TAIR:AT5G39500.1). & (gnl|cdd|36146 : 1543.0) no description available & (gnl|cdd|65184 : 274.0) no description available & (reliability: 4504.0) & (original description: Putative GN, Description = ARF guanine-nucleotide exchange factor GNOM, PFAM = PF12783;PF01369)' T '33.99' 'development.unspecified' 'niben101scf00193_176525-179718' '(at1g69490 : 314.0) Encodes a member of the NAC transcription factor gene family. It is expressed in floral primordia and upregulated by AP3 and PI. Its expression is associated with leaf senescence.; NAC-like, activated by AP3/PI (NAP); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 25 (TAIR:AT1G61110.1); Has 3046 Blast hits to 3040 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3046; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 225.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 212.0) no description available & (reliability: 628.0) & (original description: Putative NAC2, Description = NAC domain protein NAC2, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf00197_108437-114013' '(p23706|defa_antma : 330.0) Floral homeotic protein DEFICIENS - Antirrhinum majus (Garden snapdragon) & (at3g54340 : 234.0) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies petal and stamen identities. Associates with PISTILLATA.; APETALA 3 (AP3); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 71 (TAIR:AT5G51870.1); Has 6838 Blast hits to 6837 proteins in 855 species: Archae - 0; Bacteria - 0; Metazoa - 626; Fungi - 302; Plants - 5820; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (gnl|cdd|29020 : 119.0) no description available & (gnl|cdd|35238 : 89.3) no description available & (reliability: 468.0) & (original description: Putative PMADS1, Description = Floral homeotic protein PMADS 1, PFAM = PF00319;PF01486)' T '33.99' 'development.unspecified' 'niben101scf00199_184810-191512' '(q39295|agl15_brana : 150.0) Agamous-like MADS-box protein AGL15 - Brassica napus (Rape) & (at5g13790 : 144.0) AGL15 (AGAMOUS-Like 15) is a member of the MADS domain family of regulatory factors. Although AGL15 is preferentially expressed during embryogenesis, AGL15 is also expressed in leaf primordia, shoot apical meristems and young floral buds, suggesting that AGL15 may play a role during post-germinative development. Transgenic plants that ectopically express AGL15 show delays in the transition to flowering, perianth abscission and senescence and fruit and seed maturation. Role in embryogenesis and gibberellic acid catabolism. Targets B3 domain transcription factors that are key regulators of embryogenesis.; AGAMOUS-like 15 (AGL15); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 18 (TAIR:AT3G57390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 87.0) no description available & (reliability: 288.0) & (original description: Putative AGL15, Description = Agamous-like MADS-box protein AGL15, PFAM = PF00319;PF01486)' T '33.99' 'development.unspecified' 'niben101scf00199_507684-513152' '(at3g54220 : 624.0) Encodes a member of a novel family having similarity to DNA binding proteins containing basic-leucine zipper regions; scr is expressed in cortex/endodermal initial cells and in the endodermal cell lineage. Regulates the radial organization of the root. Is required cell-autonomously for distal specification of the quiescent center, which in turn regulates stem cell fate of immediately surrounding cells. SCR appears to be a direct target of SHR.; SCARECROW (SCR); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G41920.1); Has 4362 Blast hits to 4213 proteins in 491 species: Archae - 0; Bacteria - 22; Metazoa - 838; Fungi - 368; Plants - 2661; Viruses - 19; Other Eukaryotes - 454 (source: NCBI BLink). & (gnl|cdd|67150 : 336.0) no description available & (q84tq7|gai_goshi : 232.0) DELLA protein GAI (Gibberellic acid-insensitive mutant protein) (GhGAI) - Gossypium hirsutum (Upland cotton) & (reliability: 1248.0) & (original description: Putative SCR, Description = Protein SCARECROW, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf00199_630896-648768' '(at2g38670 : 645.0) Encodes a mitochondrial ethanolamine-phosphate cytidylyltransferase, involved in phosphatidylethanolamine (PE) biosynthesis.; phosphorylethanolamine cytidylyltransferase 1 (PECT1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: phosphorylcholine cytidylyltransferase (TAIR:AT2G32260.1); Has 10984 Blast hits to 6001 proteins in 1666 species: Archae - 316; Bacteria - 5963; Metazoa - 682; Fungi - 448; Plants - 283; Viruses - 6; Other Eukaryotes - 3286 (source: NCBI BLink). & (gnl|cdd|38014 : 474.0) no description available & (gnl|cdd|28836 : 227.0) no description available & (reliability: 1290.0) & (original description: Putative PECT1, Description = Ethanolamine-phosphate cytidylyltransferase, PFAM = PF01467;PF01467)' T '33.99' 'development.unspecified' 'niben101scf00202_132357-135579' '(at2g39210 : 626.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G28120.1); Has 3072 Blast hits to 2927 proteins in 685 species: Archae - 32; Bacteria - 1223; Metazoa - 36; Fungi - 288; Plants - 601; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink). & (gnl|cdd|70288 : 260.0) no description available & (reliability: 1252.0) & (original description: Putative At2g39210, Description = At2g39210/T16B24.15, PFAM = PF06813)' T '33.99' 'development.unspecified' 'niben101scf00209_8584-18687' '(at5g58003 : 280.0) Encodes a polypeptide that contains FCPH and BRCT domains. RNAi suppression mutant lines were generated, which displayed a range of phenotypic abnormalities, including: incomplete to no cotyledon expansion, slow growth, epinastic leaves or small inflorescences.; C-terminal domain phosphatase-like 4 (CPL4); FUNCTIONS IN: phosphoprotein phosphatase activity; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FCP1-like phosphatase, phosphatase domain (InterPro:IPR011947), NLI interacting factor (InterPro:IPR004274), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: C-terminal domain phosphatase-like 3 (TAIR:AT2G33540.1); Has 1202 Blast hits to 1005 proteins in 219 species: Archae - 0; Bacteria - 0; Metazoa - 364; Fungi - 271; Plants - 333; Viruses - 0; Other Eukaryotes - 234 (source: NCBI BLink). & (gnl|cdd|35544 : 176.0) no description available & (gnl|cdd|47876 : 128.0) no description available & (reliability: 560.0) & (original description: Putative At3g17550, Description = Putative phosphoprotein phosphatase, PFAM = PF03031)' T '33.99' 'development.unspecified' 'niben101scf00245_226174-233014' '(at5g61430 : 343.0) NAC domain containing protein 100 (NAC100); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 80 (TAIR:AT5G07680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5cd17|nac77_orysa : 222.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (gnl|cdd|66085 : 216.0) no description available & (reliability: 686.0) & (original description: Putative NAC4, Description = NAC domain class transcription factor, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf00262_615553-619673' '(at1g07530 : 466.0) Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm.; SCARECROW-like 14 (SCL14); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G29060.1); Has 2535 Blast hits to 2449 proteins in 301 species: Archae - 0; Bacteria - 12; Metazoa - 27; Fungi - 4; Plants - 2483; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|67150 : 310.0) no description available & (q69vg1|cigr1_orysa : 212.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (reliability: 926.0) & (original description: Putative GRAS4, Description = GRAS4, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf00271_229625-271421' '(at5g14930 : 281.0) encodes an acyl hydrolase involved in senescence .; senescence-associated gene 101 (SAG101); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G52430.1); Has 224 Blast hits to 223 proteins in 35 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 562.0) & (original description: Putative PGSC0003DMG400021206, Description = Senescence-associated gene 101, putative isoform 1, PFAM = PF01764)' T '33.99' 'development.unspecified' 'niben101scf00271_591964-602583' '(at1g30610 : 706.0) Mutations in this locus result in embryo lethality. Embryo shape at seed maturity is globular.; EMBRYO DEFECTIVE 2279 (EMB2279); FUNCTIONS IN: binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G67570.1). & (q76c99|rf1_orysa : 96.3) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1412.0) & (original description: Putative EMB2279, Description = Pentatricopeptide repeat-containing protein At1g30610, chloroplastic, PFAM = PF01535;PF01535;PF13812;PF13812)' T '33.99' 'development.unspecified' 'niben101scf00272_842713-846562' '(at1g26870 : 286.0) FEZ (FEZ); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 94 (TAIR:AT5G39820.1); Has 2973 Blast hits to 2966 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 2971; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 193.0) no description available & (q52qh4|nac68_orysa : 176.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 572.0) & (original description: Putative FEZ, Description = Protein FEZ, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf00276_242926-252850' '(at2g22540 : 206.0) Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter.; SHORT VEGETATIVE PHASE (SVP); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 24 (TAIR:AT4G24540.1); Has 7281 Blast hits to 7260 proteins in 901 species: Archae - 3; Bacteria - 13; Metazoa - 824; Fungi - 296; Plants - 6010; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (q9xj66|mad22_orysa : 184.0) MADS-box transcription factor 22 (OsMADS22) - Oryza sativa (Rice) & (gnl|cdd|29020 : 120.0) no description available & (gnl|cdd|35238 : 90.0) no description available & (reliability: 412.0) & (original description: Putative M211, Description = MPF2-like, PFAM = PF01486;PF00319)' T '33.99' 'development.unspecified' 'niben101scf00280_129208-135680' '(at4g36920 : 332.0) Encodes a floral homeotic gene, a member of the AP2/EREBP (ethylene responsive element binding protein) class of transcription factors and is involved in the specification of floral organ identity, establishment of floral meristem identity, suppression of floral meristem indeterminancy, and development of the ovule and seed coat. AP2 also has a role in controlling seed mass. Dominant negative allele I28, revealed a function in meristem maintenance-mutant meristems are smaller than normal siblings. AP2 appears to act on the WUS-CLV pathway in an AG independent manner.; APETALA 2 (AP2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 3 (TAIR:AT5G67180.1). & (q8l3u3|bbm1_brana : 149.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 92.2) no description available & (reliability: 664.0) & (original description: Putative lip2, Description = LIPLESS2, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'niben101scf00308_147922-154756' '(at3g49530 : 273.0) Transcription factor that serves as a molecular link between cold signals and pathogen resistance responses. Undergoes proteolytic processing triggered by cold-induced changes in membrane fluidity.; NAC domain containing protein 62 (NAC062); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: TCV-interacting protein (TAIR:AT5G24590.2); Has 2933 Blast hits to 2926 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2931; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 209.0) no description available & (q5z6b6|nac76_orysa : 167.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (reliability: 546.0) & (original description: Putative NAC062, Description = NAC domain-containing protein 62, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf00317_399399-403682' '(at5g47470 : 347.0) Nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT4G16620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 694.0) & (original description: Putative At5g47470, Description = WAT1-related protein At5g47470, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf00317_1152065-1212001' '(at4g00150 : 293.0) HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 195.0) no description available & (q5bn23|rga1_bracm : 103.0) DELLA protein RGA1 (RGA-like protein 1) (BrRGA1) - Brassica campestris (Field mustard) & (reliability: 586.0) & (original description: Putative GRAS, Description = GRAS family transcription factor, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf00317_1229359-1233497' '(at4g00150 : 292.0) HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 211.0) no description available & (q5bn23|rga1_bracm : 114.0) DELLA protein RGA1 (RGA-like protein 1) (BrRGA1) - Brassica campestris (Field mustard) & (reliability: 584.0) & (original description: Putative HAM, Description = Hairy meristem, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf00320_174212-184967' '(at4g09960 : 239.0) a MADS box transcription factor expressed in the carpel and ovules; SEEDSTICK (STK); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, ovule development, carpel development; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT2G42830.2). & (q40872|ag_pangi : 227.0) Floral homeotic protein AGAMOUS (GAG2) - Panax ginseng (Korean ginseng) & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 93.1) no description available & (reliability: 442.0) & (original description: Putative AGL11, Description = Agamous-like MADS-box protein AGL11, PFAM = PF00319;PF01486)' T '33.99' 'development.unspecified' 'niben101scf00321_437922-444082' '(at3g26590 : 439.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G38030.1); Has 11119 Blast hits to 11024 proteins in 1994 species: Archae - 242; Bacteria - 8025; Metazoa - 141; Fungi - 326; Plants - 1364; Viruses - 0; Other Eukaryotes - 1021 (source: NCBI BLink). & (gnl|cdd|36561 : 395.0) no description available & (gnl|cdd|30880 : 175.0) no description available & (reliability: 872.0) & (original description: Putative DTX29, Description = Protein DETOXIFICATION 29, PFAM = PF01554;PF01554)' T '33.99' 'development.unspecified' 'niben101scf00337_426072-433575' '(q39685|cmb1_diaca : 270.0) MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink) & (at3g02310 : 260.0) MADS-box protein, binds K domain of AG in vivo; SEPALLATA 2 (SEP2); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7363 Blast hits to 7362 proteins in 916 species: Archae - 3; Bacteria - 0; Metazoa - 630; Fungi - 305; Plants - 6350; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|29020 : 135.0) no description available & (gnl|cdd|35238 : 110.0) no description available & (reliability: 520.0) & (original description: Putative CMB1, Description = MADS-box protein CMB1, PFAM = PF00319;PF01486)' T '33.99' 'development.unspecified' 'niben101scf00369_1066916-1069609' '(p43349|tctp_soltu : 186.0) Translationally-controlled tumor protein homolog (TCTP) (p23) - Solanum tuberosum (Potato) & (at3g05540 : 160.0) Methionine sulfoxide reductase (MSS4-like) family protein; CONTAINS InterPro DOMAIN/s: Translationally controlled tumour protein (InterPro:IPR018105), Mss4/translationally controlled tumour-associated TCTP (InterPro:IPR011323), Translationally controlled tumour protein, conserved site (InterPro:IPR018103), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: translationally controlled tumor protein (TAIR:AT3G16640.1); Has 857 Blast hits to 857 proteins in 300 species: Archae - 0; Bacteria - 0; Metazoa - 450; Fungi - 152; Plants - 156; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (gnl|cdd|85059 : 129.0) no description available & (gnl|cdd|36938 : 127.0) no description available & (reliability: 300.0) & (original description: Putative TCTP, Description = Translationally-controlled tumor protein homolog, PFAM = PF00838)' T '33.99' 'development.unspecified' 'niben101scf00369_1363026-1367073' '(at1g56220 : 90.5) Dormancy/auxin associated family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dormancyauxin associated (InterPro:IPR008406); BEST Arabidopsis thaliana protein match is: Dormancy/auxin associated family protein (TAIR:AT1G54070.1); Has 192 Blast hits to 192 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 191; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative At1g56220, Description = Dormancy-associated protein homolog 3, PFAM = PF05564)' T '33.99' 'development.unspecified' 'niben101scf00369_1476915-1548270' '(at4g15920 : 213.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT3G16690.1); Has 980 Blast hits to 942 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 205; Fungi - 0; Plants - 645; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (gnl|cdd|36836 : 186.0) no description available & (reliability: 426.0) & (original description: Putative std1, Description = Bidirectional sugar transporter SWEET, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf00369_1652344-1656464' '(gnl|cdd|36836 : 217.0) no description available & (at4g15920 : 195.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT3G16690.1); Has 980 Blast hits to 942 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 205; Fungi - 0; Plants - 645; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (gnl|cdd|86234 : 90.2) no description available & (reliability: 390.0) & (original description: Putative SWEET16, Description = Bidirectional sugar transporter SWEET16, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf00369_2510843-2523100' '(at5g27030 : 1680.0) TOPLESS-related 3 (TPR3); FUNCTIONS IN: protein binding; INVOLVED IN: primary shoot apical meristem specification; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TOPLESS-related 2 (TAIR:AT3G16830.1). & (gnl|cdd|35487 : 128.0) no description available & (gnl|cdd|29257 : 128.0) no description available & (reliability: 3360.0) & (original description: Putative TPR3, Description = Topless-related protein 3, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf00371_416000-424962' '(at3g15470 : 783.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G54200.1); Has 35932 Blast hits to 22007 proteins in 749 species: Archae - 56; Bacteria - 5680; Metazoa - 13723; Fungi - 7656; Plants - 4267; Viruses - 6; Other Eukaryotes - 4544 (source: NCBI BLink). & (gnl|cdd|35504 : 619.0) no description available & (gnl|cdd|29257 : 126.0) no description available & (reliability: 1526.0) & (original description: Putative BnaA10g07310D, Description = BnaA10g07310D protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf00397_1171889-1183575' '(at2g22540 : 150.0) Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter.; SHORT VEGETATIVE PHASE (SVP); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 24 (TAIR:AT4G24540.1); Has 7281 Blast hits to 7260 proteins in 901 species: Archae - 3; Bacteria - 13; Metazoa - 824; Fungi - 296; Plants - 6010; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (q5k4r0|mad47_orysa : 136.0) MADS-box transcription factor 47 (OsMADS47) - Oryza sativa (Rice) & (gnl|cdd|29020 : 115.0) no description available & (gnl|cdd|35238 : 80.8) no description available & (reliability: 300.0) & (original description: Putative S21, Description = MADS-box protein STMADS11 subfamily, PFAM = PF00319;PF01486)' T '33.99' 'development.unspecified' 'niben101scf00397_1172287-1183584' '(at2g22540 : 140.0) Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter.; SHORT VEGETATIVE PHASE (SVP); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 24 (TAIR:AT4G24540.1); Has 7281 Blast hits to 7260 proteins in 901 species: Archae - 3; Bacteria - 13; Metazoa - 824; Fungi - 296; Plants - 6010; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (q5k4r0|mad47_orysa : 132.0) MADS-box transcription factor 47 (OsMADS47) - Oryza sativa (Rice) & (gnl|cdd|29020 : 114.0) no description available & (reliability: 280.0) & (original description: Putative inco, Description = Incomposita protein, PFAM = PF00319;PF01486)' T '33.99' 'development.unspecified' 'niben101scf00408_312088-327405' '(at1g73720 : 917.0) Encodes SMU1, a protein involved in RNA splicing.; SUPPRESSORS OF MEC-8 AND UNC-52 1 (SMU1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 78641 Blast hits to 32338 proteins in 893 species: Archae - 70; Bacteria - 10419; Metazoa - 31204; Fungi - 16808; Plants - 9656; Viruses - 6; Other Eukaryotes - 10478 (source: NCBI BLink). & (gnl|cdd|35496 : 880.0) no description available & (gnl|cdd|29257 : 170.0) no description available & (p93107|pf20_chlre : 91.7) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1834.0) & (original description: Putative SMU1, Description = Suppressor of mec-8 and unc-52 protein homolog 1, PFAM = PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf00414_22587-27728' '(at3g13340 : 711.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G55680.1). & (gnl|cdd|29257 : 91.6) no description available & (reliability: 1422.0) & (original description: Putative gbp3, Description = GAMYB-binding protein, PFAM = PF00400)' T '33.99' 'development.unspecified' 'niben101scf00419_1178738-1184794' '(at3g58040 : 472.0) Encodes a RING finger domain containing protein that interacts with AtRAP2.2.; seven in absentia of Arabidopsis 2 (SINAT2); FUNCTIONS IN: protein binding; INVOLVED IN: multicellular organismal development, protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Seven-in-absentia protein, TRAF-like domain (InterPro:IPR018121), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, SIAH-type (InterPro:IPR013010), Seven In Absentia Homolog-type (InterPro:IPR013323), Seven-in-absentia protein, sina (InterPro:IPR004162), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT2G41980.1); Has 1862 Blast hits to 1847 proteins in 701 species: Archae - 0; Bacteria - 0; Metazoa - 1276; Fungi - 4; Plants - 482; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink). & (gnl|cdd|38212 : 294.0) no description available & (gnl|cdd|86255 : 259.0) no description available & (q8t3y0|sinal_drome : 167.0) Probable E3 ubiquitin-protein ligase sina-like CG13030 (EC 6.3.2.-) - Drosophila melanogaster (Fruit fly) & (reliability: 944.0) & (original description: Putative SINAT2, Description = E3 ubiquitin-protein ligase SINAT2, PFAM = PF03145)' T '33.99' 'development.unspecified' 'niben101scf00430_190591-214125' '(at2g37560 : 411.0) Origin Recognition Complex subunit 2. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts strongly with all ORC subunits.; origin recognition complex second largest subunit 2 (ORC2); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 2 (InterPro:IPR007220); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38139 : 261.0) no description available & (gnl|cdd|86535 : 244.0) no description available & (reliability: 822.0) & (original description: Putative orc2, Description = Origin recognition complex subunit 2, PFAM = PF04084;PF04084)' T '33.99' 'development.unspecified' 'niben101scf00440_167811-171972' '(at3g03270 : 155.0) Adenine nucleotide alpha hydrolases-like superfamily protein; INVOLVED IN: response to stress; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G53990.1); Has 4449 Blast hits to 4366 proteins in 896 species: Archae - 444; Bacteria - 2981; Metazoa - 119; Fungi - 123; Plants - 700; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative USP1, Description = Universal stress protein 1, PFAM = PF00582)' T '33.99' 'development.unspecified' 'niben101scf00449_432308-438922' '(at2g39510 : 346.0) nodulin MtN21 /EamA-like transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT2G37460.1); Has 4772 Blast hits to 4753 proteins in 819 species: Archae - 36; Bacteria - 2386; Metazoa - 4; Fungi - 0; Plants - 1228; Viruses - 0; Other Eukaryotes - 1118 (source: NCBI BLink). & (reliability: 692.0) & (original description: Putative nlp1, Description = WAT1-related protein, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf00457_638743-669000' '(at1g13120 : 267.0) embryo defective 1745 (emb1745); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nuclear pore; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GLE1-like (InterPro:IPR012476); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05523.1); Has 36705 Blast hits to 24548 proteins in 2114 species: Archae - 242; Bacteria - 8583; Metazoa - 12421; Fungi - 3107; Plants - 1525; Viruses - 221; Other Eukaryotes - 10606 (source: NCBI BLink). & (gnl|cdd|37623 : 177.0) no description available & (gnl|cdd|87377 : 103.0) no description available & (reliability: 534.0) & (original description: Putative GLE1, Description = Protein GLE1, PFAM = PF07817)' T '33.99' 'development.unspecified' 'niben101scf00457_638900-641344' '(at1g13120 : 83.2) embryo defective 1745 (emb1745); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nuclear pore; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GLE1-like (InterPro:IPR012476); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05523.1); Has 36705 Blast hits to 24548 proteins in 2114 species: Archae - 242; Bacteria - 8583; Metazoa - 12421; Fungi - 3107; Plants - 1525; Viruses - 221; Other Eukaryotes - 10606 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative , Description = Nucleoporin GLE1, putative, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf00457_667040-669590' '(at1g13120 : 108.0) embryo defective 1745 (emb1745); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nuclear pore; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GLE1-like (InterPro:IPR012476); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05523.1); Has 36705 Blast hits to 24548 proteins in 2114 species: Archae - 242; Bacteria - 8583; Metazoa - 12421; Fungi - 3107; Plants - 1525; Viruses - 221; Other Eukaryotes - 10606 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative Os02g0596100, Description = Nucleoporin GLE1, PFAM = PF07817)' T '33.99' 'development.unspecified' 'niben101scf00458_423445-427545' '(p43349|tctp_soltu : 273.0) Translationally-controlled tumor protein homolog (TCTP) (p23) - Solanum tuberosum (Potato) & (at3g05540 : 238.0) Methionine sulfoxide reductase (MSS4-like) family protein; CONTAINS InterPro DOMAIN/s: Translationally controlled tumour protein (InterPro:IPR018105), Mss4/translationally controlled tumour-associated TCTP (InterPro:IPR011323), Translationally controlled tumour protein, conserved site (InterPro:IPR018103), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: translationally controlled tumor protein (TAIR:AT3G16640.1); Has 857 Blast hits to 857 proteins in 300 species: Archae - 0; Bacteria - 0; Metazoa - 450; Fungi - 152; Plants - 156; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (gnl|cdd|85059 : 199.0) no description available & (gnl|cdd|36938 : 190.0) no description available & (reliability: 466.0) & (original description: Putative TCTP, Description = Translationally-controlled tumor protein homolog, PFAM = PF00838)' T '33.99' 'development.unspecified' 'niben101scf00479_83176-93984' '(at5g54200 : 718.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G15470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35504 : 578.0) no description available & (gnl|cdd|29257 : 108.0) no description available & (reliability: 1436.0) & (original description: Putative At5g54200, Description = Similarity to WD-containing protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf00479_84275-92640' '(gnl|cdd|35504 : 313.0) no description available & (at5g54200 : 288.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G15470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29257 : 87.0) no description available & (reliability: 576.0) & (original description: Putative Os04g0529400, Description = Os04g0529400 protein, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf00496_254230-259383' '(at2g28550 : 295.0) related to AP2.7 (RAP2.7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 (TAIR:AT5G60120.1). & (q8l3u3|bbm1_brana : 141.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 90.7) no description available & (reliability: 566.0) & (original description: Putative Ap2B, Description = PHAP2B protein, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'niben101scf00504_362589-367947' '(at4g28190 : 316.0) Encodes a novel Cys-rich protein with a B-box like domain that acts as a negative regulator of meristem cell accumulation in inflorescence and floral meristems as loss-of-function ult1 mutations cause inflorescence meristem enlargement, the production of extra flowers and floral organs, and a decrease in floral meristem determinacy. Acts opposite to CLF which represses AG, but preventing deposition of CLF repressive methylation marks.; ULTRAPETALA1 (ULT1); INVOLVED IN: regulation of floral meristem growth, meristem determinacy, regulation of inflorescence meristem growth, floral meristem determinacy; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 19 growth stages; CONTAINS InterPro DOMAIN/s: Developmental regulator, ULTRAPETALA (InterPro:IPR020533); BEST Arabidopsis thaliana protein match is: Developmental regulator, ULTRAPETALA (TAIR:AT2G20825.1). & (reliability: 632.0) & (original description: Putative ULT1, Description = Protein ULTRAPETALA 1, PFAM = PF01342)' T '33.99' 'development.unspecified' 'niben101scf00526_33865-37955' '(at4g17980 : 292.0) NAC domain containing protein 71 (NAC071); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 96 (TAIR:AT5G46590.1); Has 2972 Blast hits to 2965 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2972; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 217.0) no description available & (q7gcl7|nac74_orysa : 186.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 584.0) & (original description: Putative NH11, Description = Nam-like protein 11, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf00537_188741-191433' '(at4g27990 : 182.0) YLMG1-2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function YGGT (InterPro:IPR003425); BEST Arabidopsis thaliana protein match is: YGGT family protein (TAIR:AT3G07430.1); Has 788 Blast hits to 788 proteins in 294 species: Archae - 0; Bacteria - 510; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative emb1990, Description = YGGT family protein, PFAM = PF02325)' T '33.99' 'development.unspecified' 'niben101scf00539_163447-196188' '(gnl|cdd|58514 : 388.0) no description available & (at1g75880 : 380.0) SGNH hydrolase-type esterase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G75890.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p40603|apg_brana : 267.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 760.0) & (original description: Putative EXL1, Description = GDSL esterase/lipase EXL3, PFAM = PF00657;PF00657)' T '33.99' 'development.unspecified' 'niben101scf00539_182346-185972' '(at1g75880 : 387.0) SGNH hydrolase-type esterase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G75890.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|58514 : 386.0) no description available & (p40603|apg_brana : 266.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 774.0) & (original description: Putative EXL1, Description = GDSL esterase/lipase EXL1, PFAM = PF00657)' T '33.99' 'development.unspecified' 'niben101scf00553_483463-487675' '(at2g46770 : 323.0) NAC transcription factor NST1. NST1 and NST2 are redundant in regulating secondary wall thickening in anther walls and siliques. NST1 promoter was detected in various tissues in which lignified secondary walls develop.; EMBRYO DEFECTIVE 2301 (EMB2301); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain protein 66 (TAIR:AT3G61910.1); Has 2975 Blast hits to 2968 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 2973; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q5z6b6|nac76_orysa : 239.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (gnl|cdd|66085 : 210.0) no description available & (reliability: 646.0) & (original description: Putative NAC066, Description = NAC domain-containing protein 66, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf00560_258571-261609' '(at1g61340 : 114.0) F-box family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G21510.1). & (reliability: 228.0) & (original description: Putative SKIP27, Description = F-box protein SKIP27, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf00592_5733-11049' '(at2g18250 : 242.0) At2g18250 encodes pantetheine-phosphate adenylyltransferase catalyzing the formation of dephospho-CoA from pantetheine 4'-phosphate. The enzyme is involved in coenzyme A biosynthesis.; 4-phosphopantetheine adenylyltransferase (COAD); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); Has 633 Blast hits to 630 proteins in 285 species: Archae - 179; Bacteria - 4; Metazoa - 125; Fungi - 130; Plants - 59; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (gnl|cdd|38561 : 199.0) no description available & (gnl|cdd|28826 : 193.0) no description available & (reliability: 484.0) & (original description: Putative COAD, Description = Phosphopantetheine adenylyltransferase, PFAM = PF01467)' T '33.99' 'development.unspecified' 'niben101scf00611_1104173-1128814' '(at2g19430 : 421.0) This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase. Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.; DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1 (DWA1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 25005 Blast hits to 14147 proteins in 619 species: Archae - 64; Bacteria - 4449; Metazoa - 9459; Fungi - 5655; Plants - 2500; Viruses - 0; Other Eukaryotes - 2878 (source: NCBI BLink). & (gnl|cdd|35868 : 263.0) no description available & (gnl|cdd|29257 : 91.6) no description available & (reliability: 842.0) & (original description: Putative THO6, Description = THO complex subunit 6, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf00611_1117259-1120443' '(at2g19430 : 133.0) This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase. Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.; DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1 (DWA1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 25005 Blast hits to 14147 proteins in 619 species: Archae - 64; Bacteria - 4449; Metazoa - 9459; Fungi - 5655; Plants - 2500; Viruses - 0; Other Eukaryotes - 2878 (source: NCBI BLink). & (gnl|cdd|35868 : 120.0) no description available & (reliability: 266.0) & (original description: Putative DWA1, Description = WD repeat-containing protein DWA1, PFAM = PF00400)' T '33.99' 'development.unspecified' 'niben101scf00646_117974-124644' '(at5g58230 : 787.0) Encodes a WD-40 repeat containing protein that functions in chromatin assembly as part of the CAF1 and FIE complex. Mutants exhibit parthenogenetic development that includes proliferation of unfertilized endosperm and embryos. In heterozygous plants 50% of embryos abort. Of the aborted embryos the early aborted class are homozygous and the later aborting lass are heterozygotes in which the defective allele is maternally transmitted. Other phenotypes include defects in ovule morphogenesis and organ initiation,as well as increased levels of heterochromatic DNA. MSI1 is needed for the transition to flowering. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis. In the ovule, the MSI1 transcripts are accumulated at their highest level before fertilization and gradually decrease after fertilization. MSI is biallelically expressed, the paternall allele is expressed in the endosperm and embryo and is not imprinted. MSI1 forms a complex with RBR1 that is required for activation of the imprinted genes FIS2 and FWA. This activation is mediated by MSI1/RBR1 mediated repression of MET1.; MULTICOPY SUPRESSOR OF IRA1 (MSI1); FUNCTIONS IN: protein binding; INVOLVED IN: in 13 processes; LOCATED IN: nucleus, chloroplast, chromatin remodeling complex, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone-binding protein RBBP4 (InterPro:IPR022052), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT2G16780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35485 : 609.0) no description available & (gnl|cdd|29257 : 114.0) no description available & (reliability: 1574.0) & (original description: Putative MSI1, Description = WD-40 repeat-containing protein MSI1, PFAM = PF12265;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf00646_409185-415303' '(at4g14110 : 274.0) Represses photomorphogenesis and induces skotomorphogenesis in the dark. A component of the COP9 signalosome complex.; CONSTITUTIVE PHOTOMORPHOGENIC 9 (COP9); CONTAINS InterPro DOMAIN/s: COP9 signalosome, subunit CSN8 (InterPro:IPR019280); Has 218 Blast hits to 218 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 136; Fungi - 17; Plants - 54; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|39615 : 259.0) no description available & (reliability: 548.0) & (original description: Putative CSN8, Description = COP9 signalosome complex subunit 8, PFAM = PF10075)' T '33.99' 'development.unspecified' 'niben101scf00646_775773-778420' '(at1g21140 : 220.0) Vacuolar iron transporter (VIT) family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217); BEST Arabidopsis thaliana protein match is: Vacuolar iron transporter (VIT) family protein (TAIR:AT3G43660.1); Has 1867 Blast hits to 1856 proteins in 645 species: Archae - 60; Bacteria - 1279; Metazoa - 0; Fungi - 103; Plants - 211; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|39674 : 201.0) no description available & (p16313|no21_soybn : 165.0) Nodulin 21 (N-21) - Glycine max (Soybean) & (gnl|cdd|29967 : 147.0) no description available & (reliability: 440.0) & (original description: Putative Os04g0538400, Description = Vacuolar iron transporter homolog 2, PFAM = PF01988;PF01988)' T '33.99' 'development.unspecified' 'niben101scf00647_126529-130479' '(at2g39900 : 137.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT3G55770.5); Has 4468 Blast hits to 3092 proteins in 184 species: Archae - 0; Bacteria - 0; Metazoa - 3526; Fungi - 76; Plants - 531; Viruses - 0; Other Eukaryotes - 335 (source: NCBI BLink). & (p29675|sf3_helan : 107.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 92.8) no description available & (reliability: 274.0) & (original description: Putative BLIM2a, Description = LIM domain protein BLIM2a, PFAM = PF00412)' T '33.99' 'development.unspecified' 'niben101scf00654_216390-233807' '(at3g13300 : 1200.0) Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development.; VARICOSE (VCS); FUNCTIONS IN: protein homodimerization activity, nucleotide binding; INVOLVED IN: mRNA catabolic process, deadenylation-independent decapping of nuclear-transcribed mRNA, leaf morphogenesis; LOCATED IN: cytosol, nucleus, cytoplasmic mRNA processing body; EXPRESSED IN: whole plant, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: varicose-related (TAIR:AT3G13290.1); Has 885 Blast hits to 799 proteins in 264 species: Archae - 2; Bacteria - 218; Metazoa - 230; Fungi - 185; Plants - 114; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|37127 : 807.0) no description available & (reliability: 2400.0) & (original description: Putative VCS, Description = Enhancer of mRNA-decapping protein 4, PFAM = PF16529)' T '33.99' 'development.unspecified' 'niben101scf00690_368229-373947' '(at4g00231 : 447.0) maternal effect embryo arrest 50 (MEE50); FUNCTIONS IN: binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Ataxin-10 domain (InterPro:IPR019156), Armadillo-type fold (InterPro:IPR016024); Has 293 Blast hits to 290 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 115; Fungi - 110; Plants - 41; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|37887 : 92.8) no description available & (reliability: 894.0) & (original description: Putative Sb01g049305, Description = Putative uncharacterized protein Sb01g049305, PFAM = PF09759)' T '33.99' 'development.unspecified' 'niben101scf00690_370366-391133' '(at4g00231 : 446.0) maternal effect embryo arrest 50 (MEE50); FUNCTIONS IN: binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Ataxin-10 domain (InterPro:IPR019156), Armadillo-type fold (InterPro:IPR016024); Has 293 Blast hits to 290 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 115; Fungi - 110; Plants - 41; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|37887 : 92.8) no description available & (reliability: 892.0) & (original description: Putative MEE50, Description = F6N15.2 protein, PFAM = PF09759)' T '33.99' 'development.unspecified' 'niben101scf00712_337335-343732' '(at1g76420 : 288.0) Identified in an enhancer trap line; member of the NAC family of proteins. Expressed at the boundary between the shoot meristem and lateral organs and the polar nuclei in the embryo sac.; CUP SHAPED COTYLEDON3 (CUC3); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 38 (TAIR:AT2G24430.2); Has 3010 Blast hits to 3003 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3005; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66085 : 210.0) no description available & (q5cd17|nac77_orysa : 206.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 576.0) & (original description: Putative CUC3, Description = CUP-SHAPED COTYLEDON3, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf00712_913202-1046665' '(at5g43822 : 185.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 370.0) & (original description: Putative LOC100193693, Description = Os10g0566900 protein, PFAM = PF15011)' T '33.99' 'development.unspecified' 'niben101scf00734_53110-65687' '(at5g16780 : 506.0) Encodes a protein belonging to SART-1 family. The gene is expressed in the basal region of the developing embryo during heart stage. Phenotypic analyses of dot2 mutants suggest that this protein plays a role in root, shoot, and flower development. dot2 mutants are dwarved plants that display an aberrant spurred leaf venation pattern and fail to flower. In the roots DOT2 appears to be require for normal meristem organization and maintenance and the proper expression of PIN and PLT genes.; DEFECTIVELY ORGANIZED TRIBUTARIES 2 (DOT2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 9 processes; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SART-1 protein (InterPro:IPR005011); BEST Arabidopsis thaliana protein match is: SART-1 family (TAIR:AT3G14700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37428 : 216.0) no description available & (gnl|cdd|66983 : 82.0) no description available & (reliability: 1012.0) & (original description: Putative DOT2, Description = SART-1 family protein DOT2, PFAM = PF03343;PF03343)' T '33.99' 'development.unspecified' 'niben101scf00752_374110-384106' '(gnl|cdd|58514 : 356.0) no description available & (at1g75900 : 318.0) GDSL-like Lipase/Acylhydrolase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G75880.2); Has 3444 Blast hits to 3405 proteins in 204 species: Archae - 0; Bacteria - 282; Metazoa - 0; Fungi - 26; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (p40603|apg_brana : 235.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 636.0) & (original description: Putative EXL3, Description = GDSL esterase/lipase EXL3, PFAM = PF00657)' T '33.99' 'development.unspecified' 'niben101scf00774_32827-46476' '(at5g58003 : 427.0) Encodes a polypeptide that contains FCPH and BRCT domains. RNAi suppression mutant lines were generated, which displayed a range of phenotypic abnormalities, including: incomplete to no cotyledon expansion, slow growth, epinastic leaves or small inflorescences.; C-terminal domain phosphatase-like 4 (CPL4); FUNCTIONS IN: phosphoprotein phosphatase activity; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FCP1-like phosphatase, phosphatase domain (InterPro:IPR011947), NLI interacting factor (InterPro:IPR004274), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: C-terminal domain phosphatase-like 3 (TAIR:AT2G33540.1); Has 1202 Blast hits to 1005 proteins in 219 species: Archae - 0; Bacteria - 0; Metazoa - 364; Fungi - 271; Plants - 333; Viruses - 0; Other Eukaryotes - 234 (source: NCBI BLink). & (gnl|cdd|35544 : 176.0) no description available & (gnl|cdd|47876 : 133.0) no description available & (reliability: 854.0) & (original description: Putative CPL4, Description = RNA polymerase II C-terminal domain phosphatase-like 4, PFAM = PF12738;PF03031)' T '33.99' 'development.unspecified' 'niben101scf00774_37257-40528' '(at5g58003 : 137.0) Encodes a polypeptide that contains FCPH and BRCT domains. RNAi suppression mutant lines were generated, which displayed a range of phenotypic abnormalities, including: incomplete to no cotyledon expansion, slow growth, epinastic leaves or small inflorescences.; C-terminal domain phosphatase-like 4 (CPL4); FUNCTIONS IN: phosphoprotein phosphatase activity; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FCP1-like phosphatase, phosphatase domain (InterPro:IPR011947), NLI interacting factor (InterPro:IPR004274), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: C-terminal domain phosphatase-like 3 (TAIR:AT2G33540.1); Has 1202 Blast hits to 1005 proteins in 219 species: Archae - 0; Bacteria - 0; Metazoa - 364; Fungi - 271; Plants - 333; Viruses - 0; Other Eukaryotes - 234 (source: NCBI BLink). & (gnl|cdd|35544 : 96.3) no description available & (gnl|cdd|47876 : 86.8) no description available & (reliability: 274.0) & (original description: Putative CPL4, Description = Carboxy-terminal domain phosphatase-like protein, PFAM = PF03031)' T '33.99' 'development.unspecified' 'niben101scf00783_631773-637990' '(at5g10190 : 608.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G78130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36544 : 396.0) no description available & (gnl|cdd|87335 : 96.3) no description available & (reliability: 1160.0) & (original description: Putative Sb02g023350, Description = Putative uncharacterized protein Sb02g023350, PFAM = PF07690)' T '33.99' 'development.unspecified' 'niben101scf00783_632072-634365' '(at5g10190 : 136.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G78130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36544 : 85.0) no description available & (reliability: 262.0) & (original description: Putative UNE2, Description = Transporter-like protein, PFAM = PF07690)' T '33.99' 'development.unspecified' 'niben101scf00792_73387-92038' '(gnl|cdd|36477 : 301.0) no description available & (at5g66920 : 289.0) SKU5 similar 17 (sks17); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: response to karrikin; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 15 (TAIR:AT4G37160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q00624|aso_brana : 259.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 104.0) no description available & (reliability: 576.0) & (original description: Putative BnaA07g12260D, Description = Monocopper oxidase-like protein SKU5, PFAM = PF00394;PF07731;PF07732)' T '33.99' 'development.unspecified' 'niben101scf00792_377967-384803' '(at3g10480 : 299.0) NAC domain containing protein 50 (NAC050); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 52 (TAIR:AT3G10490.2); Has 2988 Blast hits to 2970 proteins in 99 species: Archae - 4; Bacteria - 3; Metazoa - 28; Fungi - 4; Plants - 2904; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|66085 : 201.0) no description available & (q7gcl7|nac74_orysa : 173.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 598.0) & (original description: Putative NH4, Description = Nam-like protein 4, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf00792_460187-468281' '(at5g04410 : 374.0) NAC family member, functions as a transcriptional activator, regulates flavonoid biosynthesis under high light.; NAC domain containing protein 2 (NAC2); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 53 (TAIR:AT3G10500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66085 : 212.0) no description available & (q7gcl7|nac74_orysa : 174.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 748.0) & (original description: Putative NAC078, Description = NAC domain-containing protein 78, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf00797_1997546-2000958' '(at1g50420 : 600.0) Encodes a scarecrow-like protein (SCL3) Putative transcription factors interacting with the gene product of VHA-B1 (vacuolar ATPase subunit B1; as shown through yeast two-hybrid assay).; scarecrow-like 3 (SCL3); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 21 (TAIR:AT2G04890.1); Has 3106 Blast hits to 2488 proteins in 309 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 3100; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 223.0) no description available & (q9st48|dwrf8_maize : 219.0) DELLA protein DWARF8 (Protein dwarf-8) - Zea mays (Maize) & (reliability: 1200.0) & (original description: Putative SCL3, Description = Scarecrow-like protein 3, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf00799_38723-41915' '(at1g01720 : 343.0) Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA.; ATAF1; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 32 (TAIR:AT1G77450.1); Has 3043 Blast hits to 3037 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3043; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q7f2l3|nac48_orysa : 312.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (gnl|cdd|66085 : 205.0) no description available & (reliability: 686.0) & (original description: Putative NAC002, Description = NAC domain-containing protein 2, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf00823_228276-231765' '(at3g48740 : 250.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: homolog of Medicago truncatula MTN3 (TAIR:AT5G23660.1); Has 1006 Blast hits to 953 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 236; Fungi - 0; Plants - 627; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|36836 : 228.0) no description available & (gnl|cdd|86234 : 97.5) no description available & (reliability: 500.0) & (original description: Putative NEC1, Description = Bidirectional sugar transporter NEC1, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf00825_456219-463465' '(at1g29400 : 725.0) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices.; MEI2-like protein 5 (ML5); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like 3 (TAIR:AT4G18120.2); Has 6281 Blast hits to 5530 proteins in 358 species: Archae - 4; Bacteria - 106; Metazoa - 3185; Fungi - 1006; Plants - 1245; Viruses - 0; Other Eukaryotes - 735 (source: NCBI BLink). & (gnl|cdd|39859 : 360.0) no description available & (gnl|cdd|67666 : 193.0) no description available & (q27k34|pla2_orysa : 121.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (reliability: 1450.0) & (original description: Putative ML5, Description = Protein MEI2-like 5, PFAM = PF00076;PF00076;PF04059)' T '33.99' 'development.unspecified' 'niben101scf00830_320598-323679' '(at2g22800 : 139.0) Encodes homeobox protein HAT9.; HAT9; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein family (TAIR:AT4G37790.1); Has 6755 Blast hits to 6732 proteins in 464 species: Archae - 0; Bacteria - 0; Metazoa - 4333; Fungi - 266; Plants - 2037; Viruses - 7; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|35704 : 102.0) no description available & (reliability: 274.0) & (original description: Putative HAT4, Description = Homeobox associated leucine zipper protein, PFAM = PF02183;PF00046)' T '33.99' 'development.unspecified' 'niben101scf00831_81572-89350' '(at4g14720 : 150.0) PPD2 (and its paralog, PPD1) encode plant-specific putative DNA-binding proteins. Deletion of the PPD locus increases leaf lamina size and results in dome-shaped rather than flat leaves. Siliques are also altered in shape because of extra lamina growth.; TIFY domain/Divergent CCT motif family protein; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), Acireductone dioxygenase, ARD (InterPro:IPR004313), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: TIFY domain/Divergent CCT motif family protein (TAIR:AT4G14713.1); Has 315 Blast hits to 312 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 313; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative TIFY4B, Description = Protein TIFY 4B, PFAM = PF06200)' T '33.99' 'development.unspecified' 'niben101scf00850_174936-182124' '(at1g13980 : 2291.0) Encodes a GDP/GTP exchange factor for small G-proteins of the ADP ribosylation factor (RAF) class, and as regulator of intracellular trafficking. Homologous to Sec7p and YEC2 from yeast. Involved in the specification of apical-basal pattern formation. Essential for cell division, expansion and adhesion. It appears that heteotypic binding between the DCB and C-terminal domains of two GNOM proteins is required for membrane association, however, GNOM appears to exist predominantly as a heterodimer formed through DCB-DCB interactions.; GNOM (GN); FUNCTIONS IN: protein homodimerization activity, GTP:GDP antiporter activity; INVOLVED IN: in 13 processes; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904); BEST Arabidopsis thaliana protein match is: GNOM-like 1 (TAIR:AT5G39500.1). & (gnl|cdd|36146 : 1552.0) no description available & (gnl|cdd|65184 : 272.0) no description available & (reliability: 4582.0) & (original description: Putative GN, Description = ARF guanine-nucleotide exchange factor GNOM, PFAM = PF12783;PF01369)' T '33.99' 'development.unspecified' 'niben101scf00853_228649-232187' '(at4g37650 : 555.0) Involved in radial organization of the root and shoot axial organs. Essential for normal shoot gravitropism. The protein moves in a highly specific manner from the cells of the stele in which it is synthesized outward. Movement requires sequences within the GRAS and VHIID domains.; SHORT ROOT (SHR); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G49950.1); Has 2470 Blast hits to 2429 proteins in 304 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 15; Plants - 2427; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|67150 : 257.0) no description available & (q8gve1|cigr2_orysa : 187.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (reliability: 1110.0) & (original description: Putative SHR, Description = Protein SHORT-ROOT, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf00857_51194-56372' '(at5g07050 : 389.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT2G40900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 778.0) & (original description: Putative nlp1, Description = WAT1-related protein, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf00858_291087-294835' '(q69vg1|cigr1_orysa : 590.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (at5g48150 : 486.0) Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway.; phytochrome a signal transduction 1 (PAT1); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 21 (TAIR:AT2G04890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67150 : 314.0) no description available & (reliability: 956.0) & (original description: Putative CIGR1, Description = Chitin-inducible gibberellin-responsive protein 1, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf00863_784814-788889' '(at1g55570 : 785.0) SKU5 similar 12 (sks12); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 11 (TAIR:AT3G13390.1); Has 5441 Blast hits to 5412 proteins in 1035 species: Archae - 18; Bacteria - 1816; Metazoa - 269; Fungi - 1918; Plants - 1254; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (p29162|ntp3_tobac : 780.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36477 : 568.0) no description available & (gnl|cdd|87357 : 143.0) no description available & (reliability: 1496.0) & (original description: Putative p303, Description = L-ascorbate oxidase-like protein, PFAM = PF00394;PF07732;PF07731)' T '33.99' 'development.unspecified' 'niben101scf00863_1335444-1342965' '(at1g65480 : 277.0) FT, together with LFY, promotes flowering and is antagonistic with its homologous gene, TERMINAL FLOWER1 (TFL1). FT is expressed in leaves and is induced by long day treatment. Either the FT mRNA or protein is translocated to the shoot apex where it induces its own expression. Recent data suggests that FT protein acts as a long-range signal. FT is a target of CO and acts upstream of SOC1.; FLOWERING LOCUS T (FT); FUNCTIONS IN: phosphatidylethanolamine binding, protein binding; INVOLVED IN: photoperiodism, flowering, positive regulation of flower development, regulation of flower development; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); BEST Arabidopsis thaliana protein match is: PEBP (phosphatidylethanolamine-binding protein) family protein (TAIR:AT4G20370.1); Has 2182 Blast hits to 2182 proteins in 306 species: Archae - 0; Bacteria - 0; Metazoa - 594; Fungi - 140; Plants - 1404; Viruses - 3; Other Eukaryotes - 41 (source: NCBI BLink). & (q9xh43|cet2_tobac : 207.0) CEN-like protein 2 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|38556 : 207.0) no description available & (gnl|cdd|29585 : 183.0) no description available & (reliability: 554.0) & (original description: Putative HD3A, Description = Protein HEADING DATE 3A, PFAM = PF01161)' T '33.99' 'development.unspecified' 'niben101scf00887_90513-99759' '(at1g48410 : 1504.0) Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus.; ARGONAUTE 1 (AGO1); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT5G43810.2). & (gnl|cdd|36259 : 863.0) no description available & (gnl|cdd|72942 : 568.0) no description available & (reliability: 3008.0) & (original description: Putative MEL1, Description = Protein argonaute MEL1, PFAM = PF02170;PF16487;PF02171;PF12764;PF16486;PF08699;PF16488)' T '33.99' 'development.unspecified' 'niben101scf00904_289323-296062' '(at5g65700 : 1420.0) Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM2,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM1 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs.; BARELY ANY MERISTEM 1 (BAM1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT3G49670.1). & (p93194|rpk1_iponi : 471.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 311.0) no description available & (gnl|cdd|87344 : 161.0) no description available & (reliability: 2718.0) & (original description: Putative BAM1, Description = Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1, PFAM = PF08263;PF07714;PF00560;PF00560;PF00560)' T '33.99' 'development.unspecified' 'niben101scf00914_1430-13000' '(at2g38670 : 508.0) Encodes a mitochondrial ethanolamine-phosphate cytidylyltransferase, involved in phosphatidylethanolamine (PE) biosynthesis.; phosphorylethanolamine cytidylyltransferase 1 (PECT1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: phosphorylcholine cytidylyltransferase (TAIR:AT2G32260.1); Has 10984 Blast hits to 6001 proteins in 1666 species: Archae - 316; Bacteria - 5963; Metazoa - 682; Fungi - 448; Plants - 283; Viruses - 6; Other Eukaryotes - 3286 (source: NCBI BLink). & (gnl|cdd|38014 : 414.0) no description available & (gnl|cdd|28836 : 221.0) no description available & (reliability: 1016.0) & (original description: Putative PECT1, Description = Ethanolamine-phosphate cytidylyltransferase, PFAM = PF01467;PF01467)' T '33.99' 'development.unspecified' 'niben101scf00920_74163-79754' '(at5g48850 : 353.0) homologous to the wheat sulphate deficiency-induced gene sdi1. Expression in root and leaf is induced by sulfur starvation. Knockout mutants retained higher root and leaf sulfate concentrations, indicating a role in regulation of stored sulfate pools.; SULPHUR DEFICIENCY-INDUCED 1 (ATSDI1); FUNCTIONS IN: binding; INVOLVED IN: cellular response to sulfur starvation, regulation of sulfur utilization; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G04770.1); Has 255 Blast hits to 246 proteins in 34 species: Archae - 2; Bacteria - 37; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 706.0) & (original description: Putative SDI1, Description = Protein SULFUR DEFICIENCY-INDUCED 1, PFAM = PF14559)' T '33.99' 'development.unspecified' 'niben101scf00920_402711-433029' '(at3g07060 : 575.0) embryo defective 1974 (emb1974); CONTAINS InterPro DOMAIN/s: Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G56500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1150.0) & (original description: Putative MTR_7g026915, Description = Ribosomal protein L15, PFAM = PF01436)' T '33.99' 'development.unspecified' 'niben101scf00944_440354-446612' '(at4g28530 : 258.0) NAC domain containing protein 74 (NAC074); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT5G53950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66085 : 185.0) no description available & (q5cd17|nac77_orysa : 170.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 516.0) & (original description: Putative NAC17, Description = NAC domain protein 17, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf00949_299414-568450' '(at5g22640 : 711.0) EMB1211 is a MORN (multiple membrane occupation and recognition nexus) motif containing protein involved in embryo development and chloroplast biogenesis.; embryo defective 1211 (emb1211); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chloroplast organization, embryo development, embryo development ending in seed dormancy; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MORN motif (InterPro:IPR003409). & (reliability: 1422.0) & (original description: Putative TIC100, Description = Protein TIC 100, PFAM = PF02493;PF02493;PF02493)' T '33.99' 'development.unspecified' 'niben101scf00966_266357-270849' '(at1g26870 : 313.0) FEZ (FEZ); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 94 (TAIR:AT5G39820.1); Has 2973 Blast hits to 2966 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 2971; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 198.0) no description available & (q52qh4|nac68_orysa : 188.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 626.0) & (original description: Putative FEZ, Description = Protein FEZ, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf00996_203336-207180' '(at2g42840 : 147.0) Encodes a putative extracellular proline-rich protein is exclusively expressed in the L1 layer of vegetative, inflorescence and floral meristems and the protoderm of organ primordia.; protodermal factor 1 (PDF1); Has 74620 Blast hits to 36810 proteins in 1713 species: Archae - 153; Bacteria - 12776; Metazoa - 27126; Fungi - 11565; Plants - 10582; Viruses - 2385; Other Eukaryotes - 10033 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative BnaC04g52630D, Description = BnaC04g52630D protein, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf01006_162736-171854' '(at3g61790 : 523.0) Protein with RING/U-box and TRAF-like domains; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: multicellular organismal development, ubiquitin-dependent protein catabolic process, protein ubiquitination; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Seven-in-absentia protein, TRAF-like domain (InterPro:IPR018121), Zinc finger, SIAH-type (InterPro:IPR013010), Zinc finger, RING-type (InterPro:IPR001841), Seven In Absentia Homolog-type (InterPro:IPR013323), Seven-in-absentia protein, sina (InterPro:IPR004162), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT4G27880.1); Has 1836 Blast hits to 1817 proteins in 706 species: Archae - 0; Bacteria - 0; Metazoa - 1264; Fungi - 11; Plants - 486; Viruses - 2; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|38212 : 308.0) no description available & (gnl|cdd|86255 : 279.0) no description available & (q8t3y0|sinal_drome : 142.0) Probable E3 ubiquitin-protein ligase sina-like CG13030 (EC 6.3.2.-) - Drosophila melanogaster (Fruit fly) & (reliability: 1046.0) & (original description: Putative SINAT3, Description = E3 ubiquitin-protein ligase SINAT3, PFAM = PF03145)' T '33.99' 'development.unspecified' 'niben101scf01008_155693-158857' '(gnl|cdd|69106 : 115.0) no description available & (at1g28330 : 113.0) dormancy-associated protein (DRM1); dormancy-associated protein-like 1 (DYL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to fructose stimulus, response to sucrose stimulus, response to glucose stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dormancyauxin associated (InterPro:IPR008406); BEST Arabidopsis thaliana protein match is: Dormancy/auxin associated family protein (TAIR:AT2G33830.2). & (q05349|12kd_fraan : 102.0) Auxin-repressed 12.5 kDa protein - Fragaria ananassa (Strawberry) & (reliability: 226.0) & (original description: Putative DRMH1, Description = Dormancy-associated protein homolog 1, PFAM = PF05564)' T '33.99' 'development.unspecified' 'niben101scf01015_15678-20732' '(at1g08780 : 141.0) ABI3-interacting protein 3 (AIP3); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin beta-like (InterPro:IPR002777), Prefoldin, subunit 4 (InterPro:IPR016661); Has 376 Blast hits to 375 proteins in 196 species: Archae - 2; Bacteria - 0; Metazoa - 120; Fungi - 130; Plants - 57; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36971 : 108.0) no description available & (reliability: 282.0) & (original description: Putative AIP3, Description = Prefoldin subunit 4, PFAM = PF01920)' T '33.99' 'development.unspecified' 'niben101scf01017_626985-632828' '(at4g26740 : 338.0) Encodes caleosin, a 27-kDa protein found within seed lipid bodies. Gene is expressed preferentially in the embryo, has similarity to a rice ABA-responsive gene, EFA27. Catalyze hydroperoxide-dependent mono-oxygenation reactions. Require calcium for peroxygenase activity. Probably deeply buried in lipid droplets or microsomes.; seed gene 1 (ATS1); FUNCTIONS IN: heme oxygenase (decyclizing) activity, linoleic acid epoxygenase activity, monooxygenase activity, calcium ion binding; INVOLVED IN: oxylipin biosynthetic process, lipid particle organization, defense response, embryo development ending in seed dormancy; LOCATED IN: integral to membrane; EXPRESSED IN: embryo; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: ARABIDOPSIS THALIANA PEROXYGENASE 2 (TAIR:AT5G55240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68610 : 311.0) no description available & (reliability: 676.0) & (original description: Putative SOP1, Description = Peroxygenase, PFAM = PF05042)' T '33.99' 'development.unspecified' 'niben101scf01025_1381314-1390275' '(gnl|cdd|68707 : 155.0) no description available & (at1g19790 : 145.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 7 (SRS7); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 5 (TAIR:AT1G75520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative SHI, Description = BnaC01g31760D protein, PFAM = PF05142)' T '33.99' 'development.unspecified' 'niben101scf01025_1385992-1389386' '(gnl|cdd|68707 : 155.0) no description available & (at1g75520 : 150.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative SRS3, Description = Protein SHI RELATED SEQUENCE 3, PFAM = PF05142)' T '33.99' 'development.unspecified' 'niben101scf01028_92368-95822' '(q9xh43|cet2_tobac : 238.0) CEN-like protein 2 - Nicotiana tabacum (Common tobacco) & (at2g27550 : 235.0) encodes a protein similar to TFL1. overexpression leads to similar phenotype as TFL1 overexpression. expressed specifically in the hypocotyl and null mutation does not result in phenotypes exhibited by TFL1 null mutations.; centroradialis (ATC); CONTAINS InterPro DOMAIN/s: Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); BEST Arabidopsis thaliana protein match is: PEBP (phosphatidylethanolamine-binding protein) family protein (TAIR:AT5G03840.1); Has 2165 Blast hits to 2165 proteins in 308 species: Archae - 0; Bacteria - 2; Metazoa - 605; Fungi - 111; Plants - 1396; Viruses - 3; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|38556 : 196.0) no description available & (gnl|cdd|29585 : 178.0) no description available & (reliability: 470.0) & (original description: Putative CEN, Description = Protein CENTRORADIALIS, PFAM = PF01161)' T '33.99' 'development.unspecified' 'niben101scf01035_418042-423242' '(at2g28550 : 254.0) related to AP2.7 (RAP2.7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 (TAIR:AT5G60120.1). & (q8l3u3|bbm1_brana : 127.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 89.9) no description available & (reliability: 468.0) & (original description: Putative ids1, Description = APETALA2-like protein, PFAM = PF00847)' T '33.99' 'development.unspecified' 'niben101scf01046_364049-367764' '(at3g48740 : 240.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: homolog of Medicago truncatula MTN3 (TAIR:AT5G23660.1); Has 1006 Blast hits to 953 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 236; Fungi - 0; Plants - 627; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|36836 : 214.0) no description available & (gnl|cdd|86234 : 93.3) no description available & (reliability: 480.0) & (original description: Putative Sb08g013620, Description = Bidirectional sugar transporter SWEET, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf01046_485406-489133' '(at3g48740 : 259.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: homolog of Medicago truncatula MTN3 (TAIR:AT5G23660.1); Has 1006 Blast hits to 953 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 236; Fungi - 0; Plants - 627; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|36836 : 219.0) no description available & (gnl|cdd|86234 : 91.0) no description available & (reliability: 518.0) & (original description: Putative SWEET14, Description = Bidirectional sugar transporter SWEET14, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf01051_275030-282510' '(at5g47470 : 297.0) Nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT4G16620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 594.0) & (original description: Putative At5g47470, Description = WAT1-related protein At5g47470, PFAM = PF00892)' T '33.99' 'development.unspecified' 'niben101scf01051_384401-395569' '(at2g47310 : 199.0) flowering time control protein-related / FCA gamma-related; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Ribonucleoprotein, BRUNO-like (InterPro:IPR015903), WW/Rsp5/WWP (InterPro:IPR001202), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding;abscisic acid binding (TAIR:AT4G16280.4); Has 13219 Blast hits to 10590 proteins in 472 species: Archae - 0; Bacteria - 420; Metazoa - 8082; Fungi - 1429; Plants - 2128; Viruses - 0; Other Eukaryotes - 1160 (source: NCBI BLink). & (gnl|cdd|35366 : 187.0) no description available & (reliability: 398.0) & (original description: Putative fca, Description = Flowering time control protein FCA, PFAM = PF00397;PF00076;PF00076)' T '33.99' 'development.unspecified' 'niben101scf01052_565618-577540' '(at5g55940 : 236.0) embryo defective 2731 (emb2731); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0172 (InterPro:IPR005366); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0172) (TAIR:AT5G51620.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67291 : 232.0) no description available & (gnl|cdd|38499 : 219.0) no description available & (reliability: 472.0) & (original description: Putative EMB2731, Description = ER membrane protein complex subunit 8/9 homolog, PFAM = PF03665)' T '33.99' 'development.unspecified' 'niben101scf01054_194196-197674' '(at1g80080 : 534.0) Encodes a transmembrane leucine-repeat containing receptor-like protein that is expressed in proliferative postprotodermal cells. Recessive mutation leads to disruption of asymmetric cell division during stomata development.; TOO MANY MOUTHS (TMM); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 29 (TAIR:AT2G42800.1); Has 88991 Blast hits to 28047 proteins in 1079 species: Archae - 16; Bacteria - 3330; Metazoa - 23111; Fungi - 805; Plants - 56845; Viruses - 0; Other Eukaryotes - 4884 (source: NCBI BLink). & (p93194|rpk1_iponi : 120.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 89.3) no description available & (reliability: 1068.0) & (original description: Putative TMM, Description = Protein TOO MANY MOUTHS, PFAM = PF13855;PF13855)' T '33.99' 'development.unspecified' 'niben101scf01061_317742-350729' '(at2g34680 : 2033.0) isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular.; AUXIN-INDUCED IN ROOT CULTURES 9 (AIR9); INVOLVED IN: response to auxin stimulus, lateral root morphogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Outer arm dynein light chain 1 protein (TAIR:AT1G78230.1); Has 5746 Blast hits to 1796 proteins in 310 species: Archae - 0; Bacteria - 1053; Metazoa - 771; Fungi - 422; Plants - 290; Viruses - 42; Other Eukaryotes - 3168 (source: NCBI BLink). & (reliability: 4066.0) & (original description: Putative AIR9, Description = 187-kDa microtubule-associated protein AIR9, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf01062_836248-853077' '(q9lly4|lpat1_brana : 307.0) 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplast precursor (EC 2.3.1.51) - Brassica napus (Rape) & (at4g30580 : 298.0) Encodes a plastidic lysophosphatidic acid acyltransferase (LPAAT). Is critical for chloroplasts phosphatidic acid biosynthesis. The null allele is embryo lethal.; ATS2; FUNCTIONS IN: 1-acylglycerol-3-phosphate O-acyltransferase activity, acyltransferase activity; INVOLVED IN: metabolic process, phosphatidylglycerol biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123), 1-acyl-sn-glycerol-3-phosphate acyltransferase (InterPro:IPR004552); BEST Arabidopsis thaliana protein match is: Phospholipid/glycerol acyltransferase family protein (TAIR:AT3G05510.1); Has 12571 Blast hits to 12571 proteins in 2517 species: Archae - 0; Bacteria - 9130; Metazoa - 376; Fungi - 153; Plants - 151; Viruses - 0; Other Eukaryotes - 2761 (source: NCBI BLink). & (gnl|cdd|38059 : 158.0) no description available & (gnl|cdd|30553 : 88.8) no description available & (reliability: 596.0) & (original description: Putative PGSC0003DMG402011138, Description = 1-acyl-sn-glycerol-3-phosphate acyltransferase, PFAM = PF01553)' T '33.99' 'development.unspecified' 'niben101scf01062_837080-842091' '(q9lly4|lpat1_brana : 209.0) 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplast precursor (EC 2.3.1.51) - Brassica napus (Rape) & (at4g30580 : 204.0) Encodes a plastidic lysophosphatidic acid acyltransferase (LPAAT). Is critical for chloroplasts phosphatidic acid biosynthesis. The null allele is embryo lethal.; ATS2; FUNCTIONS IN: 1-acylglycerol-3-phosphate O-acyltransferase activity, acyltransferase activity; INVOLVED IN: metabolic process, phosphatidylglycerol biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123), 1-acyl-sn-glycerol-3-phosphate acyltransferase (InterPro:IPR004552); BEST Arabidopsis thaliana protein match is: Phospholipid/glycerol acyltransferase family protein (TAIR:AT3G05510.1); Has 12571 Blast hits to 12571 proteins in 2517 species: Archae - 0; Bacteria - 9130; Metazoa - 376; Fungi - 153; Plants - 151; Viruses - 0; Other Eukaryotes - 2761 (source: NCBI BLink). & (gnl|cdd|38059 : 109.0) no description available & (reliability: 408.0) & (original description: Putative ACT2, Description = 1-acyl-sn-glycerol-3-phosphate acyltransferase, PFAM = PF01553)' T '33.99' 'development.unspecified' 'niben101scf01063_926966-931134' '(at4g33270 : 725.0) putative cdc20 protein (CDC20.1); CDC20.1; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT4G33260.1); Has 49595 Blast hits to 24757 proteins in 709 species: Archae - 60; Bacteria - 7548; Metazoa - 19325; Fungi - 10981; Plants - 5978; Viruses - 0; Other Eukaryotes - 5703 (source: NCBI BLink). & (gnl|cdd|35526 : 465.0) no description available & (gnl|cdd|29257 : 147.0) no description available & (reliability: 1410.0) & (original description: Putative fzy, Description = Cell division cycle protein 20, PFAM = PF00400;PF00400;PF00400;PF12894)' T '33.99' 'development.unspecified' 'niben101scf01063_1035246-1046508' '(at3g18110 : 1745.0) embryo defective 1270 (EMB1270); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: proton gradient regulation 3 (TAIR:AT4G31850.1); Has 86684 Blast hits to 15673 proteins in 320 species: Archae - 10; Bacteria - 87; Metazoa - 1175; Fungi - 1349; Plants - 81184; Viruses - 0; Other Eukaryotes - 2879 (source: NCBI BLink). & (q76c99|rf1_orysa : 200.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 3490.0) & (original description: Putative EMB1270, Description = Pentatricopeptide repeat-containing protein At3g18110, chloroplastic, PFAM = PF13041;PF13041;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535)' T '33.99' 'development.unspecified' 'niben101scf01075_84150-93050' '(at3g18390 : 761.0) embryo defective 1865 (EMB1865); FUNCTIONS IN: RNA binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: CRM family member 3B (TAIR:AT4G14510.1); Has 1281 Blast hits to 1142 proteins in 135 species: Archae - 11; Bacteria - 10; Metazoa - 285; Fungi - 118; Plants - 447; Viruses - 43; Other Eukaryotes - 367 (source: NCBI BLink). & (gnl|cdd|37201 : 409.0) no description available & (gnl|cdd|85815 : 87.9) no description available & (reliability: 1522.0) & (original description: Putative EMB1865, Description = CRS1 / YhbY (CRM) domain-containing protein, PFAM = PF01985;PF01985;PF01985)' T '33.99' 'development.unspecified' 'niben101scf01089_95739-104212' '(at5g08560 : 636.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT5G43920.1); Has 58921 Blast hits to 28907 proteins in 822 species: Archae - 84; Bacteria - 8409; Metazoa - 23216; Fungi - 12597; Plants - 7341; Viruses - 6; Other Eukaryotes - 7268 (source: NCBI BLink). & (gnl|cdd|35514 : 529.0) no description available & (gnl|cdd|29257 : 133.0) no description available & (reliability: 1272.0) & (original description: Putative WDS, Description = Transducin/WD40 domain-containing protein, PFAM = PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf01091_28096-31871' '(at5g62850 : 205.0) Encodes a protein that is expressed in vegetative cells of pollen.; VEGETATIVE CELL EXPRESSED1 (AtVEX1); INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT3G28007.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36836 : 196.0) no description available & (gnl|cdd|86234 : 80.2) no description available & (reliability: 410.0) & (original description: Putative std1, Description = Bidirectional sugar transporter SWEET, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf01111_589445-595172' '(at3g55770 : 178.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1). & (p29675|sf3_helan : 137.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 135.0) no description available & (reliability: 354.0) & (original description: Putative atl2, Description = Pollen-specific protein SF3, PFAM = PF00412;PF00412)' T '33.99' 'development.unspecified' 'niben101scf01139_60605-70276' '(at5g65380 : 639.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, ripening, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G44050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36561 : 439.0) no description available & (gnl|cdd|30880 : 161.0) no description available & (reliability: 1278.0) & (original description: Putative DTX27, Description = Protein DETOXIFICATION 27, PFAM = PF01554;PF01554)' T '33.99' 'development.unspecified' 'niben101scf01143_369527-381754' '(q42429|agl8_soltu : 334.0) Agamous-like MADS-box protein AGL8 homolog (POTM1-1) - Solanum tuberosum (Potato) & (at5g60910 : 266.0) MADS box gene negatively regulated by APETALA1; AGAMOUS-like 8 (AGL8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of flower development, maintenance of inflorescence meristem identity, fruit development; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G69120.1); Has 3783 Blast hits to 3782 proteins in 618 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 10; Plants - 3766; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|29020 : 124.0) no description available & (gnl|cdd|35238 : 100.0) no description available & (reliability: 532.0) & (original description: Putative m4, Description = FRUITFULL-like protein, PFAM = PF00319;PF01486)' T '33.99' 'development.unspecified' 'niben101scf01143_401346-411119' '(q39685|cmb1_diaca : 257.0) MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink) & (at3g02310 : 231.0) MADS-box protein, binds K domain of AG in vivo; SEPALLATA 2 (SEP2); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7363 Blast hits to 7362 proteins in 916 species: Archae - 3; Bacteria - 0; Metazoa - 630; Fungi - 305; Plants - 6350; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|29020 : 119.0) no description available & (gnl|cdd|35238 : 104.0) no description available & (reliability: 462.0) & (original description: Putative CMB1, Description = MADS-box protein CMB1, PFAM = PF00319;PF01486)' T '33.99' 'development.unspecified' 'niben101scf01143_406189-411078' '(at3g02310 : 126.0) MADS-box protein, binds K domain of AG in vivo; SEPALLATA 2 (SEP2); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7363 Blast hits to 7362 proteins in 916 species: Archae - 3; Bacteria - 0; Metazoa - 630; Fungi - 305; Plants - 6350; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (q39685|cmb1_diaca : 125.0) MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink) & (gnl|cdd|29020 : 111.0) no description available & (gnl|cdd|35238 : 85.8) no description available & (reliability: 252.0) & (original description: Putative dal1, Description = MADS-box transcription factor, PFAM = PF00319)' T '33.99' 'development.unspecified' 'niben101scf01145_313186-317968' '(at4g33270 : 580.0) putative cdc20 protein (CDC20.1); CDC20.1; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT4G33260.1); Has 49595 Blast hits to 24757 proteins in 709 species: Archae - 60; Bacteria - 7548; Metazoa - 19325; Fungi - 10981; Plants - 5978; Viruses - 0; Other Eukaryotes - 5703 (source: NCBI BLink). & (gnl|cdd|35526 : 438.0) no description available & (gnl|cdd|29257 : 142.0) no description available & (reliability: 1140.0) & (original description: Putative CDC20, Description = Cell division cycle protein 20 homolog, PFAM = PF00400;PF00400;PF12894)' T '33.99' 'development.unspecified' 'niben101scf01146_697235-719074' '(at4g29230 : 391.0) NAC domain containing protein 75 (NAC075); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 99 (TAIR:AT5G56620.1); Has 3052 Blast hits to 2928 proteins in 176 species: Archae - 2; Bacteria - 22; Metazoa - 475; Fungi - 52; Plants - 2293; Viruses - 3; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|66085 : 135.0) no description available & (reliability: 782.0) & (original description: Putative NAC16, Description = NAC domain protein, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf01150_126201-128869' '(at3g43660 : 220.0) Vacuolar iron transporter (VIT) family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217); BEST Arabidopsis thaliana protein match is: Vacuolar iron transporter (VIT) family protein (TAIR:AT3G43630.1); Has 1844 Blast hits to 1835 proteins in 644 species: Archae - 71; Bacteria - 1261; Metazoa - 0; Fungi - 84; Plants - 213; Viruses - 0; Other Eukaryotes - 215 (source: NCBI BLink). & (gnl|cdd|39674 : 215.0) no description available & (p16313|no21_soybn : 159.0) Nodulin 21 (N-21) - Glycine max (Soybean) & (gnl|cdd|29967 : 151.0) no description available & (reliability: 440.0) & (original description: Putative At3g43660, Description = Vacuolar iron transporter homolog 4, PFAM = PF01988;PF01988)' T '33.99' 'development.unspecified' 'niben101scf01150_848268-852063' '(at1g43650 : 278.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G09380.1). & (reliability: 556.0) & (original description: Putative At1g43650, Description = WAT1-related protein At1g43650, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf01153_122691-130690' '(at4g29230 : 435.0) NAC domain containing protein 75 (NAC075); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 99 (TAIR:AT5G56620.1); Has 3052 Blast hits to 2928 proteins in 176 species: Archae - 2; Bacteria - 22; Metazoa - 475; Fungi - 52; Plants - 2293; Viruses - 3; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|66085 : 135.0) no description available & (reliability: 870.0) & (original description: Putative NAC10, Description = NAC domain-containing protein, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf01156_134193-137628' '(at4g24220 : 568.0) encodes a novel protein containing mammalian death domain involved in programmed cell death. Gene is expressed in vascular system and mutants carrying dominant mutation in the gene have defective vascular patterning. Gene expression is induced specifically by wounding.; VEIN PATTERNING 1 (VEP1); FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: xylem and phloem pattern formation, response to wounding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G58750.1); Has 711 Blast hits to 707 proteins in 202 species: Archae - 0; Bacteria - 240; Metazoa - 0; Fungi - 168; Plants - 221; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (reliability: 1136.0) & (original description: Putative rmd, Description = NAD-dependent dehydratase, PFAM = PF01370)' T '33.99' 'development.unspecified' 'niben101scf01159_16754-32686' '(at1g02090 : 342.0) encodes a phosphoprotein that is a subunit of the COP9 signalosome. Mutants exhibit constitutive photomorphogenic phenotype.; FUSCA 5 (FUS5); CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38460 : 294.0) no description available & (reliability: 684.0) & (original description: Putative CSN7, Description = COP9 signalosome complex subunit 7, PFAM = PF01399)' T '33.99' 'development.unspecified' 'niben101scf01170_143062-152891' '(at3g09090 : 1094.0) Encodes DEX1 (defective in exine formation). Required for exine pattern formation during pollen development.; DEFECTIVE IN EXINE FORMATION 1 (DEX1); CONTAINS InterPro DOMAIN/s: FG-GAP (InterPro:IPR013517). & (reliability: 2188.0) & (original description: Putative DEX1, Description = Protein DEFECTIVE IN EXINE FORMATION 1, PFAM = PF13517)' T '33.99' 'development.unspecified' 'niben101scf01181_53428-61572' '(at1g48635 : 388.0) peroxin 3 (PEX3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: peroxisome organization; LOCATED IN: mitochondrion, peroxisome, integral to peroxisomal membrane; CONTAINS InterPro DOMAIN/s: Peroxin-3 (InterPro:IPR006966); BEST Arabidopsis thaliana protein match is: peroxin 3-1 (TAIR:AT3G18160.1); Has 293 Blast hits to 293 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 111; Plants - 49; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|39645 : 227.0) no description available & (gnl|cdd|68456 : 107.0) no description available & (reliability: 738.0) & (original description: Putative PEX3, Description = Peroxisome biogenesis protein 3-2, PFAM = PF04882)' T '33.99' 'development.unspecified' 'niben101scf01181_61995-66118' '(p93340|gblp_nicpl : 582.0) Guanine nucleotide-binding protein subunit beta-like protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g18130 : 523.0) Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1C has no phenotype on its own and probably acts redundantly with RACK1A and RACK1B.; receptor for activated C kinase 1C (RACK1C_AT); FUNCTIONS IN: nucleotide binding; INVOLVED IN: shoot development, root development; LOCATED IN: nucleolus, heterotrimeric G-protein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B (TAIR:AT1G48630.1); Has 88582 Blast hits to 37057 proteins in 965 species: Archae - 74; Bacteria - 10338; Metazoa - 34853; Fungi - 20136; Plants - 11319; Viruses - 6; Other Eukaryotes - 11856 (source: NCBI BLink). & (gnl|cdd|35500 : 447.0) no description available & (gnl|cdd|29257 : 232.0) no description available & (reliability: 1042.0) & (original description: Putative ARCA, Description = Guanine nucleotide-binding protein subunit beta-like protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf01181_171658-179768' '(at3g18060 : 972.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Nitrous oxide reductase, N-terminal (InterPro:IPR011045), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: nucleotide binding (TAIR:AT2G01330.2); Has 46825 Blast hits to 21434 proteins in 724 species: Archae - 58; Bacteria - 7760; Metazoa - 18076; Fungi - 9371; Plants - 5681; Viruses - 0; Other Eukaryotes - 5879 (source: NCBI BLink). & (gnl|cdd|35539 : 788.0) no description available & (gnl|cdd|29257 : 146.0) no description available & (reliability: 1944.0) & (original description: Putative AIP1, Description = 66 kDa stress protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf01181_221674-225519' '(at1g18100 : 248.0) Encodes a member of the FT and TFL1 family of phosphatidylethanolamine-binding proteins. It is expressed in seeds and up-regulated in response to ABA. Loss of function mutants show decreased rate of germination in the presence of ABA. ABA dependent regulation is mediated by both ABI3 and ABI5. ABI5 promotes MFT expression, primarily in the radicle-hypocotyl transition zone and ABI3 suppresses it in the seed.; E12A11; CONTAINS InterPro DOMAIN/s: Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); BEST Arabidopsis thaliana protein match is: PEBP (phosphatidylethanolamine-binding protein) family protein (TAIR:AT5G03840.1); Has 2417 Blast hits to 2417 proteins in 371 species: Archae - 0; Bacteria - 118; Metazoa - 639; Fungi - 192; Plants - 1429; Viruses - 3; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|38556 : 183.0) no description available & (q9xh43|cet2_tobac : 179.0) CEN-like protein 2 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29585 : 146.0) no description available & (reliability: 496.0) & (original description: Putative MFT, Description = Protein MOTHER of FT and TFL1, PFAM = PF01161)' T '33.99' 'development.unspecified' 'niben101scf01190_227377-240805' '(q27k34|pla2_orysa : 120.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (at3g26120 : 112.0) Similar to terminal ear1 in Zea mays. A member of mei2-like gene family; phylogenetic analysis revealed that TEL1 belongs to the third clade of mei2-like proteins (TEL clade), with conserved two N-terminal RNA recognition motifs (RRM), in addition to the C-terminal RRM, shared among all mei2-like proteins.; terminal EAR1-like 1 (TEL1); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: primary root apical meristem, cotyledon primordium, shoot apical meristem, floral meristem, embryonic shoot apical meristem; EXPRESSED DURING: D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: terminal EAR1-like 2 (TAIR:AT1G67770.1); Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|39859 : 106.0) no description available & (gnl|cdd|67666 : 88.2) no description available & (reliability: 206.0) & (original description: Putative TEL1, Description = Terminal EAR1-like 1, PFAM = PF04059)' T '33.99' 'development.unspecified' 'niben101scf01221_596536-599639' '(gnl|cdd|67150 : 174.0) no description available & (at3g03450 : 101.0) Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.; RGA-like 2 (RGL2); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2697 Blast hits to 2637 proteins in 314 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2690; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q6ei06|gaip_cucma : 97.8) DELLA protein GAIP (Gibberellic acid-insensitive phloem protein) (GAIP) (CmGAIP) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 183.4) & (original description: Putative GRAS38, Description = GRAS family transcription factor, putative, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf01226_242833-250142' '(q39295|agl15_brana : 135.0) Agamous-like MADS-box protein AGL15 - Brassica napus (Rape) & (at5g13790 : 132.0) AGL15 (AGAMOUS-Like 15) is a member of the MADS domain family of regulatory factors. Although AGL15 is preferentially expressed during embryogenesis, AGL15 is also expressed in leaf primordia, shoot apical meristems and young floral buds, suggesting that AGL15 may play a role during post-germinative development. Transgenic plants that ectopically express AGL15 show delays in the transition to flowering, perianth abscission and senescence and fruit and seed maturation. Role in embryogenesis and gibberellic acid catabolism. Targets B3 domain transcription factors that are key regulators of embryogenesis.; AGAMOUS-like 15 (AGL15); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 18 (TAIR:AT3G57390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|29020 : 126.0) no description available & (gnl|cdd|35238 : 84.7) no description available & (reliability: 264.0) & (original description: Putative MADS9, Description = MADS9, PFAM = PF01486;PF00319)' T '33.99' 'development.unspecified' 'niben101scf01234_276768-280393' '(at4g17230 : 610.0) Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family.; SCARECROW-like 13 (SCL13); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: scarecrow-like 5 (TAIR:AT1G50600.1); Has 2512 Blast hits to 2467 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 520.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 340.0) no description available & (reliability: 1220.0) & (original description: Putative SCL13, Description = SCL domain class transcription factor, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf01236_251912-257603' '(at3g06430 : 629.0) embryo defective 2750 (EMB2750); INVOLVED IN: pollen tube development, embryo development ending in seed dormancy; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G53170.1); Has 31867 Blast hits to 12007 proteins in 283 species: Archae - 3; Bacteria - 31; Metazoa - 288; Fungi - 376; Plants - 30037; Viruses - 0; Other Eukaryotes - 1132 (source: NCBI BLink). & (q76c99|rf1_orysa : 100.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1258.0) & (original description: Putative ppr2, Description = PPR2, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535;PF01535)' T '33.99' 'development.unspecified' 'niben101scf01239_45153-48178' '(at5g24520 : 538.0) Required for the accumulation of purple anthocyanins in leaves and stems. Involved in trichome and root hair development. Controls epidermal cell fate specification. Affects dihydroflavonol 4-reductase gene expression. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. Based on clonal analysis and other methonds TTG1 has been shown to act non-cell autonomously and to move via plasmodesmata between cells.Localization and levels of TTG1 affect patterning of leaf trichomes.; TRANSPARENT TESTA GLABRA 1 (TTG1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G12910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35511 : 472.0) no description available & (gnl|cdd|29257 : 82.4) no description available & (reliability: 1076.0) & (original description: Putative wdr1, Description = WD-repeat protein, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf01249_682667-686034' '(at3g48740 : 260.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: homolog of Medicago truncatula MTN3 (TAIR:AT5G23660.1); Has 1006 Blast hits to 953 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 236; Fungi - 0; Plants - 627; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|36836 : 226.0) no description available & (gnl|cdd|86234 : 91.0) no description available & (reliability: 520.0) & (original description: Putative SWEET11, Description = Bidirectional sugar transporter SWEET11, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf01252_544613-550850' '(at5g10190 : 629.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G78130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36544 : 400.0) no description available & (gnl|cdd|87335 : 95.6) no description available & (reliability: 1224.0) & (original description: Putative Os09g0371200, Description = Os09g0371200 protein, PFAM = PF07690)' T '33.99' 'development.unspecified' 'niben101scf01277_49827-53310' '(at5g61430 : 343.0) NAC domain containing protein 100 (NAC100); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 80 (TAIR:AT5G07680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5cd17|nac77_orysa : 215.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (gnl|cdd|66085 : 210.0) no description available & (reliability: 686.0) & (original description: Putative nac1, Description = NAC domain-containing protein 1, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf01290_215138-218010' '(at5g58360 : 104.0) ovate family protein 3 (OFP3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 4 (TAIR:AT1G06920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68419 : 83.8) no description available & (reliability: 208.0) & (original description: Putative BnaA05g12010D, Description = BnaA05g12010D protein, PFAM = PF04844;PF13724)' T '33.99' 'development.unspecified' 'niben101scf01300_17402-21344' '(gnl|cdd|70011 : 153.0) no description available & (at3g48140 : 136.0) B12D protein; CONTAINS InterPro DOMAIN/s: B12D (InterPro:IPR010530); BEST Arabidopsis thaliana protein match is: B12D protein (TAIR:AT3G29970.1); Has 143 Blast hits to 143 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative b12D, Description = B12D-like protein, PFAM = PF06522)' T '33.99' 'development.unspecified' 'niben101scf01300_111852-116885' '(at5g14930 : 283.0) encodes an acyl hydrolase involved in senescence .; senescence-associated gene 101 (SAG101); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G52430.1); Has 224 Blast hits to 223 proteins in 35 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 566.0) & (original description: Putative PGSC0003DMG400006945, Description = Senescence-associated protein, PFAM = PF01764)' T '33.99' 'development.unspecified' 'niben101scf01304_180629-203539' '(at3g13870 : 1155.0) required for regulated cell expansion and normal root hair development. Encodes an evolutionarily conserved protein with putative GTP-binding motifs that is implicated in the control of vesicle trafficking between the endoplasmic reticulum and the Golgi compartments.; ROOT HAIR DEFECTIVE 3 (RHD3); FUNCTIONS IN: GTP binding; INVOLVED IN: root epidermal cell differentiation, plant-type cell wall biogenesis, ER to Golgi vesicle-mediated transport, actin cytoskeleton organization, cell tip growth; LOCATED IN: endoplasmic reticulum, plasma membrane, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Root hair defective 3 GTP-binding (InterPro:IPR008803); BEST Arabidopsis thaliana protein match is: Root hair defective 3 GTP-binding protein (RHD3) (TAIR:AT1G72960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37414 : 1031.0) no description available & (gnl|cdd|69407 : 911.0) no description available & (reliability: 2310.0) & (original description: Putative At1g72960, Description = Protein ROOT HAIR DEFECTIVE 3 homolog 1, PFAM = PF05879)' T '33.99' 'development.unspecified' 'niben101scf01310_422142-446535' '(q39685|cmb1_diaca : 249.0) MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink) & (at2g03710 : 231.0) This gene belongs to the family of SEP genes. It is involved in the development of sepals, petals, stamens and carpels. Additionally, it plays a central role in the determination of flower meristem and organ identity.; SEPALLATA 4 (SEP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29020 : 129.0) no description available & (gnl|cdd|35238 : 105.0) no description available & (reliability: 454.0) & (original description: Putative MADS8, Description = MADS-box transcription factor 8, PFAM = PF00319;PF01486)' T '33.99' 'development.unspecified' 'niben101scf01310_459378-475076' '(q41276|ap1_sinal : 232.0) Floral homeotic protein APETALA1 (MADS C) - Sinapis alba (White mustard) (Brassica hirta) & (at1g69120 : 223.0) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.; APETALA1 (AP1); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 8031 Blast hits to 8015 proteins in 981 species: Archae - 10; Bacteria - 56; Metazoa - 785; Fungi - 329; Plants - 6623; Viruses - 2; Other Eukaryotes - 226 (source: NCBI BLink). & (gnl|cdd|29020 : 118.0) no description available & (gnl|cdd|35238 : 89.7) no description available & (reliability: 446.0) & (original description: Putative m28, Description = FRUITFULL-like protein, PFAM = PF00319;PF01486)' T '33.99' 'development.unspecified' 'niben101scf01314_7598-12899' '(at3g47650 : 120.0) DnaJ/Hsp40 cysteine-rich domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 88 Blast hits to 88 proteins in 28 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative bsd2, Description = Bundle sheath defective protein 2, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf01314_14457-20802' '(at3g47650 : 109.0) DnaJ/Hsp40 cysteine-rich domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 88 Blast hits to 88 proteins in 28 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative bsd2, Description = Bundle sheath defective protein 2, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf01326_433729-437621' '(at1g26870 : 291.0) FEZ (FEZ); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 94 (TAIR:AT5G39820.1); Has 2973 Blast hits to 2966 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 2971; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 199.0) no description available & (q52qh4|nac68_orysa : 187.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 582.0) & (original description: Putative NAC20, Description = NAC domain class transcription factor, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf01327_151046-182034' '(q40700|mads1_orysa : 137.0) MADS-box transcription factor 1 (OsMADS1) (Protein LEAFY HULL STERILE1) (Protein SEPALLATA-like) - Oryza sativa (Rice) & (at5g65070 : 134.0) Encodes MADS-box containing FLC paralog. Five splice variants have been identified but not characterized with respect to expression patterns and/or differing function. Overexpression of the gene in the Landsberg ecotype leads to a delay in flowering, transcript levels of MAF4 are reduced after a 6 week vernalization.; MADS AFFECTING FLOWERING 4 (MAF4); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G65080.1). & (gnl|cdd|29020 : 109.0) no description available & (gnl|cdd|35238 : 89.7) no description available & (reliability: 246.0) & (original description: Putative AGL31, Description = Agamous-like MADS-box protein AGL31, PFAM = PF00319;PF01486)' T '33.99' 'development.unspecified' 'niben101scf01330_107191-112113' '(at2g24430 : 294.0) Arabidopsis NAC domain containing protein 39 (ANAC039); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, hypocotyl, root, leaf; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 58 (TAIR:AT3G18400.1); Has 3031 Blast hits to 3023 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 6; Plants - 3020; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 215.0) no description available & (q5cd17|nac77_orysa : 209.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 588.0) & (original description: Putative NH19, Description = Nam-like protein 19, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf01346_198489-203061' '(at5g62380 : 86.3) Encodes a NAC-domain transcription factor involved in xylem formation. Induces transdifferentiation of various cells into metaxylem vessel elements. Located in the nucleus. Expression induced in the presence of auxin, cytokinin and brassinosteroids.; NAC-domain protein 101 (NAC101); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC 007 (TAIR:AT1G12260.1); Has 3040 Blast hits to 3031 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3040; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 86.1) no description available & (reliability: 172.6) & (original description: Putative PGSC0003DMG400015991, Description = NAC transcription factor 058, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf01365_673693-677087' '(gnl|cdd|67150 : 239.0) no description available & (at2g04890 : 190.0) Encodes a scarecrow-like protein (SCL21). Member of GRAS gene family.; SCARECROW-like 21 (SCL21); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G48150.2); Has 2478 Blast hits to 2441 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2474; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8s4w7|gai1_vitvi : 187.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 380.0) & (original description: Putative glysoja_024156, Description = DELLA protein GAI, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf01369_204028-211113' '(at1g76420 : 296.0) Identified in an enhancer trap line; member of the NAC family of proteins. Expressed at the boundary between the shoot meristem and lateral organs and the polar nuclei in the embryo sac.; CUP SHAPED COTYLEDON3 (CUC3); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 38 (TAIR:AT2G24430.2); Has 3010 Blast hits to 3003 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3005; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66085 : 208.0) no description available & (q5cd17|nac77_orysa : 205.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 592.0) & (original description: Putative NAC031, Description = Protein CUP-SHAPED COTYLEDON 3, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf01374_38745-57067' '(at1g79840 : 816.0) Glabra 2, a homeodomain protein affects epidermal cell identity including trichomes, root hairs, and seed coat. It also down-regulates seed oil content. Expressed in atrichoblasts and required to suppress root hair development. Also expressed abundantly during early seed development. Directly regulated by WER.; GLABRA 2 (GL2); CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: protodermal factor 2 (TAIR:AT4G04890.1). & (gnl|cdd|29139 : 187.0) no description available & (reliability: 1632.0) & (original description: Putative GL2, Description = Homeobox-leucine zipper protein GLABRA 2, PFAM = PF00046;PF01852)' T '33.99' 'development.unspecified' 'niben101scf01374_892757-900779' '(at1g79760 : 139.0) Identified as target of the AGL15 binding motif CArG.; downstream target of AGL15-4 (DTA4); Has 56 Blast hits to 56 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative glysoja_036877, Description = S-norcoclaurine synthase 1, PFAM = PF03171;PF14226)' T '33.99' 'development.unspecified' 'niben101scf01375_850687-856412' '(at4g21190 : 337.0) embryo defective 1417 (emb1417); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18975.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 674.0) & (original description: Putative Os01g0757700, Description = Os01g0757700 protein, PFAM = PF01535;PF01535)' T '33.99' 'development.unspecified' 'niben101scf01414_238618-245008' '(at1g29400 : 686.0) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices.; MEI2-like protein 5 (ML5); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like 3 (TAIR:AT4G18120.2); Has 6281 Blast hits to 5530 proteins in 358 species: Archae - 4; Bacteria - 106; Metazoa - 3185; Fungi - 1006; Plants - 1245; Viruses - 0; Other Eukaryotes - 735 (source: NCBI BLink). & (gnl|cdd|39859 : 350.0) no description available & (gnl|cdd|67666 : 189.0) no description available & (q27k34|pla2_orysa : 122.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (reliability: 1372.0) & (original description: Putative ML2, Description = Protein MEI2-like 2, PFAM = PF00076;PF00076;PF04059)' T '33.99' 'development.unspecified' 'niben101scf01417_501567-504559' '(at5g01840 : 91.7) Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. Functions as a transcriptional repressor that suppresses cell elongation.; ovate family protein 1 (OFP1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: N-terminal protein myristoylation, regulation of unidimensional cell growth; LOCATED IN: nucleolus, cytoskeleton; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 3 (TAIR:AT5G58360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68419 : 86.5) no description available & (reliability: 181.8) & (original description: Putative OFP1, Description = Ovate transcriptional repressor, PFAM = PF13724;PF04844)' T '33.99' 'development.unspecified' 'niben101scf01432_169332-174137' '(at4g36920 : 340.0) Encodes a floral homeotic gene, a member of the AP2/EREBP (ethylene responsive element binding protein) class of transcription factors and is involved in the specification of floral organ identity, establishment of floral meristem identity, suppression of floral meristem indeterminancy, and development of the ovule and seed coat. AP2 also has a role in controlling seed mass. Dominant negative allele I28, revealed a function in meristem maintenance-mutant meristems are smaller than normal siblings. AP2 appears to act on the WUS-CLV pathway in an AG independent manner.; APETALA 2 (AP2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 3 (TAIR:AT5G67180.1). & (q8l3u3|bbm1_brana : 143.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 92.2) no description available & (reliability: 680.0) & (original description: Putative lip1, Description = LIPLESS1, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'niben101scf01433_352813-357903' '(p23706|defa_antma : 241.0) Floral homeotic protein DEFICIENS - Antirrhinum majus (Garden snapdragon) & (at3g54340 : 193.0) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies petal and stamen identities. Associates with PISTILLATA.; APETALA 3 (AP3); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 71 (TAIR:AT5G51870.1); Has 6838 Blast hits to 6837 proteins in 855 species: Archae - 0; Bacteria - 0; Metazoa - 626; Fungi - 302; Plants - 5820; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (gnl|cdd|29020 : 111.0) no description available & (gnl|cdd|35238 : 83.1) no description available & (reliability: 386.0) & (original description: Putative DEFA, Description = Floral homeotic protein DEFICIENS, PFAM = PF00319;PF01486)' T '33.99' 'development.unspecified' 'niben101scf01436_250400-370264' '(at4g32551 : 287.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (gnl|cdd|29257 : 170.0) no description available & (gnl|cdd|35493 : 125.0) no description available & (reliability: 574.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf01436_268469-283098' '(at4g32551 : 289.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (gnl|cdd|29257 : 153.0) no description available & (gnl|cdd|35487 : 123.0) no description available & (reliability: 578.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf01436_276220-282098' '(at4g32551 : 303.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (gnl|cdd|29257 : 161.0) no description available & (gnl|cdd|35487 : 128.0) no description available & (reliability: 606.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf01438_425216-431447' '(at5g57390 : 348.0) Encodes a member of the AP2 family of transcriptional regulators.May be involved in germination and seedling growth. Mutants are resistant to ABA analogs and are resistant to high nitrogen concentrations.essential for the developmental transition between the embryonic and vegetative phases in plants.Overexpression results in the formation of somatic embryos on cotyledons.; AINTEGUMENTA-like 5 (AIL5); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G20840.1); Has 9099 Blast hits to 5771 proteins in 325 species: Archae - 0; Bacteria - 38; Metazoa - 238; Fungi - 101; Plants - 7378; Viruses - 6; Other Eukaryotes - 1338 (source: NCBI BLink). & (q8lsn2|bbm2_brana : 317.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (gnl|cdd|47695 : 91.8) no description available & (reliability: 696.0) & (original description: Putative AIL1, Description = AP2-like ethylene-responsive transcription factor, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'niben101scf01450_596007-601893' '(at1g77450 : 197.0) NAC domain containing protein 32 (NAC032); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT1G01720.1); Has 3015 Blast hits to 3009 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3015; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q7f2l3|nac48_orysa : 195.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (gnl|cdd|66085 : 170.0) no description available & (reliability: 394.0) & (original description: Putative AF1, Description = NAC domain protein, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf01479_107322-122456' '(at2g43000 : 264.0) NAC domain containing protein 42 (NAC042); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT3G12910.1); Has 2932 Blast hits to 2927 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2932; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 175.0) no description available & (q52qh4|nac68_orysa : 169.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 528.0) & (original description: Putative JUB1, Description = Transcription factor JUNGBRUNNEN 1, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf01481_277164-287620' '(at3g10500 : 249.0) NAC domain containing protein 53 (NAC053); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 2 (TAIR:AT5G04410.1); Has 3039 Blast hits to 3027 proteins in 85 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 7; Plants - 3017; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66085 : 188.0) no description available & (q7gcl7|nac74_orysa : 166.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 498.0) & (original description: Putative AIF, Description = NAC domain-containing protein 78, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf01485_295769-299171' '(at4g17670 : 114.0) Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT5G47060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative dl4870c, Description = BnaC01g10250D protein, PFAM = PF04570)' T '33.99' 'development.unspecified' 'niben101scf01494_664866-676911' '(at1g10510 : 705.0) embryo defective 2004 (emb2004); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RAN GTPase activating protein 1 (TAIR:AT3G63130.2); Has 21704 Blast hits to 6781 proteins in 315 species: Archae - 0; Bacteria - 982; Metazoa - 9646; Fungi - 490; Plants - 1111; Viruses - 0; Other Eukaryotes - 9475 (source: NCBI BLink). & (gnl|cdd|39509 : 139.0) no description available & (gnl|cdd|29015 : 137.0) no description available & (reliability: 1410.0) & (original description: Putative emb2004, Description = Putative uncharacterized protein At1g10510, PFAM = PF13516;PF13516;PF13516;PF13516;PF13516;PF13516;PF13516;PF13516;PF13516;PF13516)' T '33.99' 'development.unspecified' 'niben101scf01495_187449-196371' '(at4g20900 : 281.0) ms5 mutants are male sterile, pollen tetrads undergo an extra round of division after meiosis II without chromosome replication, resulting in chromosome abnormalities. Gene product has some similarity to SCP1, a rat synaptonemal complex protein.; MALE-STERILE 5 (MS5); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G44330.1); Has 181 Blast hits to 179 proteins in 26 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 0; Plants - 166; Viruses - 5; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 562.0) & (original description: Putative MS5, Description = Tetratricopeptide-like helical, PFAM = PF00515)' T '33.99' 'development.unspecified' 'niben101scf01519_997413-1005683' '(at1g65480 : 251.0) FT, together with LFY, promotes flowering and is antagonistic with its homologous gene, TERMINAL FLOWER1 (TFL1). FT is expressed in leaves and is induced by long day treatment. Either the FT mRNA or protein is translocated to the shoot apex where it induces its own expression. Recent data suggests that FT protein acts as a long-range signal. FT is a target of CO and acts upstream of SOC1.; FLOWERING LOCUS T (FT); FUNCTIONS IN: phosphatidylethanolamine binding, protein binding; INVOLVED IN: photoperiodism, flowering, positive regulation of flower development, regulation of flower development; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); BEST Arabidopsis thaliana protein match is: PEBP (phosphatidylethanolamine-binding protein) family protein (TAIR:AT4G20370.1); Has 2182 Blast hits to 2182 proteins in 306 species: Archae - 0; Bacteria - 0; Metazoa - 594; Fungi - 140; Plants - 1404; Viruses - 3; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|38556 : 203.0) no description available & (q9xh43|cet2_tobac : 181.0) CEN-like protein 2 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|29585 : 178.0) no description available & (reliability: 502.0) & (original description: Putative SP3D, Description = SP3D, PFAM = PF01161)' T '33.99' 'development.unspecified' 'niben101scf01526_407570-411080' '(at4g17980 : 237.0) NAC domain containing protein 71 (NAC071); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 96 (TAIR:AT5G46590.1); Has 2972 Blast hits to 2965 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2972; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 215.0) no description available & (q7gcl7|nac74_orysa : 164.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 474.0) & (original description: Putative NH11, Description = Nam-like protein 11, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf01526_1373705-1376766' '(at4g17670 : 115.0) Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT5G47060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68153 : 80.0) no description available & (reliability: 230.0) & (original description: Putative BnaC07g19900D, Description = BnaC07g19900D protein, PFAM = PF04570)' T '33.99' 'development.unspecified' 'niben101scf01556_230801-239838' '(at2g32950 : 910.0) Represses photomorphogenesis and induces skotomorphogenesis in the dark. Contains a ring finger zinc-binding motif, a coiled-coil domain, and several WD-40 repeats, similar to G-beta proteins. The C-terminus has homology to TAFII80, a subunit of the TFIID component of the RNA polymerase II of Drosophila. Nuclear localization in the dark and cytoplasmic in the light.; CONSTITUTIVE PHOTOMORPHOGENIC 1 (COP1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA1-related 2 (TAIR:AT4G11110.1); Has 42218 Blast hits to 27649 proteins in 756 species: Archae - 30; Bacteria - 4454; Metazoa - 17716; Fungi - 8958; Plants - 5306; Viruses - 46; Other Eukaryotes - 5708 (source: NCBI BLink). & (p93471|cop1_pea : 902.0) E3 ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive photomorphogenesis protein 1) - Pisum sativum (Garden pea) & (gnl|cdd|29257 : 127.0) no description available & (gnl|cdd|35486 : 96.5) no description available & (reliability: 1820.0) & (original description: Putative COP1, Description = E3 ubiquitin-protein ligase COP1, PFAM = PF13923;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf01571_422784-434648' '(at1g48410 : 1566.0) Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus.; ARGONAUTE 1 (AGO1); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT5G43810.2). & (gnl|cdd|36259 : 859.0) no description available & (gnl|cdd|72942 : 568.0) no description available & (reliability: 3132.0) & (original description: Putative AGO1A, Description = Protein argonaute 1A, PFAM = PF12764;PF08699;PF16488;PF16486;PF02170;PF16487;PF02171)' T '33.99' 'development.unspecified' 'niben101scf01571_430788-434558' '(at1g48410 : 239.0) Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus.; ARGONAUTE 1 (AGO1); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT5G43810.2). & (gnl|cdd|72942 : 195.0) no description available & (gnl|cdd|36259 : 165.0) no description available & (reliability: 478.0) & (original description: Putative ago2, Description = Protein argonaute 1A, PFAM = PF02171;PF02171)' T '33.99' 'development.unspecified' 'niben101scf01616_670697-722981' '(at1g79350 : 1824.0) embryo defective 1135 (EMB1135); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, LSD1-type (InterPro:IPR005735), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); Has 4247 Blast hits to 3784 proteins in 326 species: Archae - 2; Bacteria - 520; Metazoa - 2572; Fungi - 347; Plants - 469; Viruses - 36; Other Eukaryotes - 301 (source: NCBI BLink). & (gnl|cdd|36726 : 996.0) no description available & (reliability: 3648.0) & (original description: Putative sno, Description = Protein strawberry notch, PFAM = PF13872;PF13871)' T '33.99' 'development.unspecified' 'niben101scf01623_1848164-1876961' '(at2g47410 : 1058.0) WD40/YVTN repeat-like-containing domain;Bromodomain; FUNCTIONS IN: nucleotide binding; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Bromodomain (InterPro:IPR001487), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD40/YVTN repeat-like-containing domain;Bromodomain (TAIR:AT5G49430.1). & (gnl|cdd|35863 : 406.0) no description available & (gnl|cdd|29257 : 177.0) no description available & (reliability: 2116.0) & (original description: Putative BRWD1501, Description = PH-interacting protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf01633_9257-12147' '(at2g19580 : 332.0) Member of TETRASPANIN family; tetraspanin2 (TET2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: Tetraspanin family protein (TAIR:AT5G46700.1); Has 515 Blast hits to 513 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 84; Fungi - 0; Plants - 420; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 664.0) & (original description: Putative TET2, Description = Tetraspanin-2, PFAM = PF00335)' T '33.99' 'development.unspecified' 'niben101scf01635_493585-499012' '(gnl|cdd|36401 : 364.0) no description available & (at1g52540 : 325.0) Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G15890.1); Has 98543 Blast hits to 97377 proteins in 3831 species: Archae - 68; Bacteria - 11032; Metazoa - 36701; Fungi - 6941; Plants - 30133; Viruses - 293; Other Eukaryotes - 13375 (source: NCBI BLink). & (q8l4h4|nork_medtr : 218.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (gnl|cdd|47549 : 159.0) no description available & (reliability: 650.0) & (original description: Putative At3g15890, Description = PTI1-like tyrosine-protein kinase At3g15890, PFAM = PF00069)' T '33.99' 'development.unspecified' 'niben101scf01655_272824-277371' '(at3g61230 : 261.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G45800.1); Has 5500 Blast hits to 3584 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 4540; Fungi - 25; Plants - 547; Viruses - 0; Other Eukaryotes - 388 (source: NCBI BLink). & (p29675|sf3_helan : 182.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 177.0) no description available & (reliability: 522.0) & (original description: Putative PLIM2A, Description = LIM domain-containing protein PLIM2a, PFAM = PF00412;PF00412)' T '33.99' 'development.unspecified' 'niben101scf01656_194855-206117' '(at1g09380 : 199.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G07050.1); Has 5897 Blast hits to 5875 proteins in 1081 species: Archae - 84; Bacteria - 3492; Metazoa - 6; Fungi - 4; Plants - 1243; Viruses - 0; Other Eukaryotes - 1068 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative PGSC0003DMG400000553, Description = WAT1-related protein, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf01664_154254-157791' '(at3g51280 : 524.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G48850.1); Has 898 Blast hits to 725 proteins in 125 species: Archae - 8; Bacteria - 246; Metazoa - 0; Fungi - 4; Plants - 180; Viruses - 0; Other Eukaryotes - 460 (source: NCBI BLink). & (reliability: 1048.0) & (original description: Putative At3g51280, Description = Protein POLLENLESS 3-LIKE 2, PFAM = PF00515)' T '33.99' 'development.unspecified' 'niben101scf01673_368457-374093' '(at5g20700 : 96.7) Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT1G74940.1); Has 476 Blast hits to 476 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 476; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative dl4870c, Description = BnaC01g10250D protein, PFAM = PF04570)' T '33.99' 'development.unspecified' 'niben101scf01687_3115-20142' '(at3g07060 : 535.0) embryo defective 1974 (emb1974); CONTAINS InterPro DOMAIN/s: Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G56500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1070.0) & (original description: Putative BnaA05g30490D, Description = BnaA05g30490D protein, PFAM = PF01436)' T '33.99' 'development.unspecified' 'niben101scf01692_100348-107009' '(at4g36920 : 364.0) Encodes a floral homeotic gene, a member of the AP2/EREBP (ethylene responsive element binding protein) class of transcription factors and is involved in the specification of floral organ identity, establishment of floral meristem identity, suppression of floral meristem indeterminancy, and development of the ovule and seed coat. AP2 also has a role in controlling seed mass. Dominant negative allele I28, revealed a function in meristem maintenance-mutant meristems are smaller than normal siblings. AP2 appears to act on the WUS-CLV pathway in an AG independent manner.; APETALA 2 (AP2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 3 (TAIR:AT5G67180.1). & (q8l3u3|bbm1_brana : 144.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 90.3) no description available & (reliability: 728.0) & (original description: Putative AP2, Description = Floral homeotic protein APETALA 2, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'niben101scf01696_507003-512944' '(at1g08780 : 136.0) ABI3-interacting protein 3 (AIP3); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin beta-like (InterPro:IPR002777), Prefoldin, subunit 4 (InterPro:IPR016661); Has 376 Blast hits to 375 proteins in 196 species: Archae - 2; Bacteria - 0; Metazoa - 120; Fungi - 130; Plants - 57; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|36971 : 109.0) no description available & (reliability: 272.0) & (original description: Putative AIP3, Description = Probable prefoldin subunit 4, PFAM = PF01920)' T '33.99' 'development.unspecified' 'niben101scf01697_850661-912051' '(at5g46700 : 368.0) Encodes a transmembrane protein of the tetraspanin (TET) family, one of 17 members found in Arabidopsis. Double mutant analysis showed that TRN1 and TRN2 act in the same pathway. Required for the maintenance of both the radial pattern of tissue differentiation in the root and for the subsequent circumferential pattern within the epidermis.; TORNADO 2 (TRN2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: radial pattern formation, meristem structural organization, aging, leaf vascular tissue pattern formation, root morphogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 32 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499); BEST Arabidopsis thaliana protein match is: tetraspanin2 (TAIR:AT2G19580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84702 : 82.0) no description available & (reliability: 736.0) & (original description: Putative TRN2, Description = Protein TORNADO 2, PFAM = PF00335)' T '33.99' 'development.unspecified' 'niben101scf01701_213736-219411' '(at1g75500 : 547.0) An Arabidopsis thaliana homolog of Medicago truncatula NODULIN21 (MtN21). The gene encodes a plant-specific, predicted integral membrane protein and is a member of the Plant-Drug/Metabolite Exporter (P-DME) family (Transporter Classification number: TC 2.A.7.3).; Walls Are Thin 1 (WAT1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT3G53210.1). & (reliability: 1094.0) & (original description: Putative WAT1, Description = Protein WALLS ARE THIN 1, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf01702_144412-152434' '(gnl|cdd|58514 : 386.0) no description available & (at1g75900 : 377.0) GDSL-like Lipase/Acylhydrolase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G75880.2); Has 3444 Blast hits to 3405 proteins in 204 species: Archae - 0; Bacteria - 282; Metazoa - 0; Fungi - 26; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (p40603|apg_brana : 271.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 754.0) & (original description: Putative EXL3, Description = GDSL esterase/lipase EXL3, PFAM = PF00657)' T '33.99' 'development.unspecified' 'niben101scf01702_145770-151618' '(at1g75900 : 254.0) GDSL-like Lipase/Acylhydrolase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G75880.2); Has 3444 Blast hits to 3405 proteins in 204 species: Archae - 0; Bacteria - 282; Metazoa - 0; Fungi - 26; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|58514 : 254.0) no description available & (p40603|apg_brana : 162.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 508.0) & (original description: Putative EXL1, Description = GDSL esterase/lipase EXL3, PFAM = PF00657)' T '33.99' 'development.unspecified' 'niben101scf01711_109897-118220' '(at4g20270 : 1010.0) Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function.; BARELY ANY MERISTEM 3 (BAM3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: regulation of meristem growth, protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, leaf development, floral organ development; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G65700.2); Has 219938 Blast hits to 139586 proteins in 4977 species: Archae - 151; Bacteria - 21929; Metazoa - 70277; Fungi - 10656; Plants - 90391; Viruses - 423; Other Eukaryotes - 26111 (source: NCBI BLink). & (p93194|rpk1_iponi : 455.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 297.0) no description available & (gnl|cdd|87344 : 156.0) no description available & (reliability: 2020.0) & (original description: Putative BAM3, Description = Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3, PFAM = PF00560;PF08263;PF07714)' T '33.99' 'development.unspecified' 'niben101scf01740_1447901-1454795' '(at1g08860 : 397.0) Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Overexpression of this gene suppresses bon1-1 phenotypes. Double mutant analyses with bon1-1 suggest that BON1 and BON3 have overlapping functions in maintaining cellular homeostasis and inhibiting cell death.; BONZAI 3 (BON3); FUNCTIONS IN: calcium-dependent phospholipid binding; INVOLVED IN: N-terminal protein myristoylation, cellular homeostasis, positive regulation of cellular defense response, negative regulation of cell death; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.4); Has 1559 Blast hits to 1479 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 903; Fungi - 12; Plants - 319; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). & (gnl|cdd|36541 : 295.0) no description available & (gnl|cdd|29232 : 275.0) no description available & (reliability: 730.0) & (original description: Putative cpnC, Description = Calcium-dependent phospholipid-binding copine family protein, PFAM = PF07002;PF07002)' T '33.99' 'development.unspecified' 'niben101scf01759_480586-488609' '(at5g60690 : 1332.0) REVOLUTA regulates meristem initiation at lateral positions. a member of a small homeodomain-leucine zipper family. Has overlapping functions with PHAVOLUTA and PHABULOSA.; REVOLUTA (REV); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), MEKHLA (InterPro:IPR013978), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein (TAIR:AT2G34710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87593 : 212.0) no description available & (reliability: 2664.0) & (original description: Putative REV, Description = Homeobox-leucine zipper protein REVOLUTA, PFAM = PF00046;PF01852;PF08670)' T '33.99' 'development.unspecified' 'niben101scf01785_123354-130593' '(at1g29400 : 593.0) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices.; MEI2-like protein 5 (ML5); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like 3 (TAIR:AT4G18120.2); Has 6281 Blast hits to 5530 proteins in 358 species: Archae - 4; Bacteria - 106; Metazoa - 3185; Fungi - 1006; Plants - 1245; Viruses - 0; Other Eukaryotes - 735 (source: NCBI BLink). & (gnl|cdd|39859 : 363.0) no description available & (gnl|cdd|67666 : 196.0) no description available & (q27k34|pla2_orysa : 122.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (reliability: 1186.0) & (original description: Putative AML1, Description = MEI2-like protein 5, PFAM = PF04059;PF00076)' T '33.99' 'development.unspecified' 'niben101scf01818_372619-376079' '(at1g01720 : 327.0) Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA.; ATAF1; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 32 (TAIR:AT1G77450.1); Has 3043 Blast hits to 3037 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3043; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q7f2l3|nac48_orysa : 296.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (gnl|cdd|66085 : 205.0) no description available & (reliability: 654.0) & (original description: Putative NAC081, Description = Protein ATAF2, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf01820_61710-67163' '(at3g06430 : 610.0) embryo defective 2750 (EMB2750); INVOLVED IN: pollen tube development, embryo development ending in seed dormancy; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G53170.1); Has 31867 Blast hits to 12007 proteins in 283 species: Archae - 3; Bacteria - 31; Metazoa - 288; Fungi - 376; Plants - 30037; Viruses - 0; Other Eukaryotes - 1132 (source: NCBI BLink). & (q76c99|rf1_orysa : 105.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1220.0) & (original description: Putative ppr2, Description = PPR2, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041)' T '33.99' 'development.unspecified' 'niben101scf01824_113370-122118' '(at1g63260 : 359.0) Member of TETRASPANIN family; tetraspanin10 (TET10); INVOLVED IN: aging; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: tetraspanin3 (TAIR:AT3G45600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84702 : 81.2) no description available & (reliability: 718.0) & (original description: Putative TET10, Description = Tetraspanin-10, PFAM = PF00335)' T '33.99' 'development.unspecified' 'niben101scf01824_150461-156201' '(at2g39900 : 218.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT3G55770.5); Has 4468 Blast hits to 3092 proteins in 184 species: Archae - 0; Bacteria - 0; Metazoa - 3526; Fungi - 76; Plants - 531; Viruses - 0; Other Eukaryotes - 335 (source: NCBI BLink). & (p29675|sf3_helan : 166.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 150.0) no description available & (reliability: 436.0) & (original description: Putative atl2, Description = Pollen-specific protein SF3, PFAM = PF00412;PF00412)' T '33.99' 'development.unspecified' 'niben101scf01827_46072-55528' '(q03416|glob_tobac : 340.0) Floral homeotic protein GLOBOSA - Nicotiana tabacum (Common tobacco) & (at5g20240 : 194.0) Floral homeotic gene encoding a MADS domain transcription factor. Required for the specification of petal and stamen identities.; PISTILLATA (PI); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G23260.1); Has 7000 Blast hits to 6999 proteins in 918 species: Archae - 0; Bacteria - 3; Metazoa - 620; Fungi - 300; Plants - 6000; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|29020 : 124.0) no description available & (gnl|cdd|35238 : 82.3) no description available & (reliability: 388.0) & (original description: Putative GLO, Description = Floral homeotic protein GLOBOSA, PFAM = PF00319;PF01486)' T '33.99' 'development.unspecified' 'niben101scf01830_239406-242778' '(at2g46770 : 306.0) NAC transcription factor NST1. NST1 and NST2 are redundant in regulating secondary wall thickening in anther walls and siliques. NST1 promoter was detected in various tissues in which lignified secondary walls develop.; EMBRYO DEFECTIVE 2301 (EMB2301); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain protein 66 (TAIR:AT3G61910.1); Has 2975 Blast hits to 2968 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 2973; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q5z6b6|nac76_orysa : 235.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (gnl|cdd|66085 : 211.0) no description available & (reliability: 612.0) & (original description: Putative nst3, Description = NAC trascription factor 3, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf01842_397199-401700' '(q9xh43|cet2_tobac : 262.0) CEN-like protein 2 - Nicotiana tabacum (Common tobacco) & (at2g27550 : 261.0) encodes a protein similar to TFL1. overexpression leads to similar phenotype as TFL1 overexpression. expressed specifically in the hypocotyl and null mutation does not result in phenotypes exhibited by TFL1 null mutations.; centroradialis (ATC); CONTAINS InterPro DOMAIN/s: Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); BEST Arabidopsis thaliana protein match is: PEBP (phosphatidylethanolamine-binding protein) family protein (TAIR:AT5G03840.1); Has 2165 Blast hits to 2165 proteins in 308 species: Archae - 0; Bacteria - 2; Metazoa - 605; Fungi - 111; Plants - 1396; Viruses - 3; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|38556 : 199.0) no description available & (gnl|cdd|29585 : 182.0) no description available & (reliability: 522.0) & (original description: Putative CET2, Description = CEN-like protein 2, PFAM = PF01161)' T '33.99' 'development.unspecified' 'niben101scf01859_689874-701463' '(at1g47530 : 637.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, ripening, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: root hair specific 2 (TAIR:AT1G12950.1); Has 9964 Blast hits to 9893 proteins in 2013 species: Archae - 182; Bacteria - 7111; Metazoa - 140; Fungi - 326; Plants - 1355; Viruses - 0; Other Eukaryotes - 850 (source: NCBI BLink). & (gnl|cdd|36561 : 432.0) no description available & (gnl|cdd|30880 : 158.0) no description available & (reliability: 1274.0) & (original description: Putative DTX33, Description = Protein DETOXIFICATION 33, PFAM = PF01554;PF01554)' T '33.99' 'development.unspecified' 'niben101scf01871_40333-43501' '(at5g43070 : 92.4) WPP family members contains an NE targeting domain. This domain, called the WPP domain after a highly conserved Trp-Pro-Pro motif, is necessary and sufficient for NE targeting of WPP1. RNAi suppression of WPP1 resulted in reduced mitotic activity.; WPP domain protein 1 (WPP1); BEST Arabidopsis thaliana protein match is: WPP domain protein 2 (TAIR:AT1G47200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative MAF1, Description = MFP1 attachment factor 1, PFAM = PF13943)' T '33.99' 'development.unspecified' 'niben101scf01894_358656-361597' '(at5g64530 : 210.0) xylem NAC domain 1 (XND1); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 25 (TAIR:AT1G61110.1); Has 2741 Blast hits to 2738 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2741; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 125.0) no description available & (q52qh4|nac68_orysa : 102.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 420.0) & (original description: Putative NAC104, Description = NAC domain-containing protein 104, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf01934_116505-132245' '(at5g49430 : 1612.0) WD40/YVTN repeat-like-containing domain;Bromodomain; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Bromodomain (InterPro:IPR001487), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD40/YVTN repeat-like-containing domain;Bromodomain (TAIR:AT2G47410.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35863 : 402.0) no description available & (gnl|cdd|29257 : 180.0) no description available & (reliability: 3224.0) & (original description: Putative BnaC07g27200D, Description = BnaC07g27200D protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00439)' T '33.99' 'development.unspecified' 'niben101scf01937_161405-166630' '(p49030|mgn_orysa : 278.0) Protein mago nashi homolog (Mago nashi-like protein) - Oryza sativa (Rice) & (at1g02140 : 273.0) MAGO NASHI (MAGO); FUNCTIONS IN: protein binding; INVOLVED IN: pollen tube guidance, sex determination, embryo development ending in seed dormancy; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mago nashi protein (InterPro:IPR004023); Has 476 Blast hits to 476 proteins in 200 species: Archae - 0; Bacteria - 0; Metazoa - 223; Fungi - 96; Plants - 76; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|38602 : 269.0) no description available & (gnl|cdd|66475 : 264.0) no description available & (reliability: 546.0) & (original description: Putative mago, Description = Protein mago nashi, PFAM = PF02792)' T '33.99' 'development.unspecified' 'niben101scf01943_317099-332442' '(at2g31340 : 738.0) embryo defective 1381 (emb1381); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1476.0) & (original description: Putative)' T '33.99' 'development.unspecified' 'niben101scf01956_1017144-1024486' '(at4g08290 : 185.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT2G39510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 370.0) & (original description: Putative PGSC0003DMG400006066, Description = WAT1-related protein, PFAM = PF00892)' T '33.99' 'development.unspecified' 'niben101scf01956_1017720-1024844' '(at1g75500 : 223.0) An Arabidopsis thaliana homolog of Medicago truncatula NODULIN21 (MtN21). The gene encodes a plant-specific, predicted integral membrane protein and is a member of the Plant-Drug/Metabolite Exporter (P-DME) family (Transporter Classification number: TC 2.A.7.3).; Walls Are Thin 1 (WAT1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT3G53210.1). & (reliability: 446.0) & (original description: Putative PGSC0003DMG400006066, Description = WAT1-related protein, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf01964_334128-342736' '(at1g09380 : 327.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G07050.1); Has 5897 Blast hits to 5875 proteins in 1081 species: Archae - 84; Bacteria - 3492; Metazoa - 6; Fungi - 4; Plants - 1243; Viruses - 0; Other Eukaryotes - 1068 (source: NCBI BLink). & (reliability: 654.0) & (original description: Putative wat1, Description = WAT1-related protein, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf01964_503356-509104' '(at1g09380 : 347.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G07050.1); Has 5897 Blast hits to 5875 proteins in 1081 species: Archae - 84; Bacteria - 3492; Metazoa - 6; Fungi - 4; Plants - 1243; Viruses - 0; Other Eukaryotes - 1068 (source: NCBI BLink). & (reliability: 694.0) & (original description: Putative wat1, Description = WAT1-related protein, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf01968_172423-176021' '(at1g01780 : 270.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G45800.1); Has 4819 Blast hits to 3002 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 4032; Fungi - 22; Plants - 446; Viruses - 0; Other Eukaryotes - 319 (source: NCBI BLink). & (gnl|cdd|36913 : 181.0) no description available & (p29675|sf3_helan : 173.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (reliability: 540.0) & (original description: Putative PLIM2B, Description = LIM domain-containing protein PLIM2b, PFAM = PF00412;PF00412)' T '33.99' 'development.unspecified' 'niben101scf01971_34262-37079' '(at3g05680 : 192.0) embryo defective 2016 (EMB2016); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown. & (gnl|cdd|40019 : 155.0) no description available & (reliability: 384.0) & (original description: Putative At3g05680, Description = BnaA03g29130D protein, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf01976_76295-80480' '(at2g20825 : 200.0) ULTRAPETALA 2 (ULT2); FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Developmental regulator, ULTRAPETALA (InterPro:IPR020533), SAND domain (InterPro:IPR000770); BEST Arabidopsis thaliana protein match is: Developmental regulator, ULTRAPETALA (TAIR:AT4G28190.1); Has 46 Blast hits to 46 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative ULT2, Description = Protein ULTRAPETALA 2, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf01980_710510-716309' '(at1g78130 : 607.0) unfertilized embryo sac 2 (UNE2); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G10190.1); Has 16910 Blast hits to 16851 proteins in 2099 species: Archae - 450; Bacteria - 14339; Metazoa - 386; Fungi - 319; Plants - 340; Viruses - 3; Other Eukaryotes - 1073 (source: NCBI BLink). & (gnl|cdd|36544 : 390.0) no description available & (gnl|cdd|87335 : 83.3) no description available & (reliability: 1214.0) & (original description: Putative BnaA02g18770D, Description = BnaA02g18770D protein, PFAM = PF07690)' T '33.99' 'development.unspecified' 'niben101scf01992_104650-108527' '(at2g20825 : 197.0) ULTRAPETALA 2 (ULT2); FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Developmental regulator, ULTRAPETALA (InterPro:IPR020533), SAND domain (InterPro:IPR000770); BEST Arabidopsis thaliana protein match is: Developmental regulator, ULTRAPETALA (TAIR:AT4G28190.1); Has 46 Blast hits to 46 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative ULT2, Description = Protein ULTRAPETALA 2, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf01994_5638-17056' '(at5g12130 : 413.0) PIGMENT DEFECTIVE 149 (PDE149); CONTAINS InterPro DOMAIN/s: Integral membrane protein TerC (InterPro:IPR005496), Integral membrane protein TerC, riboswitch-linked (InterPro:IPR022369); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31202 : 149.0) no description available & (reliability: 826.0) & (original description: Putative TERC, Description = Thylakoid membrane protein TERC, chloroplastic, PFAM = PF03741)' T '33.99' 'development.unspecified' 'niben101scf02023_156760-162617' '(at1g78020 : 100.0) Protein of unknown function (DUF581); EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT1G22160.1); Has 525 Blast hits to 525 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 525; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68153 : 81.9) no description available & (reliability: 200.0) & (original description: Putative , Description = , PFAM = PF04570)' T '33.99' 'development.unspecified' 'niben101scf02046_7600-10637' '(at1g12910 : 642.0) Encodes a protein with similarity to the petunia WD repeat protein an11.; ANTHOCYANIN11 (ATAN11); CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G26640.1); Has 4731 Blast hits to 4446 proteins in 351 species: Archae - 6; Bacteria - 291; Metazoa - 1848; Fungi - 1200; Plants - 767; Viruses - 0; Other Eukaryotes - 619 (source: NCBI BLink). & (gnl|cdd|35511 : 541.0) no description available & (reliability: 1284.0) & (original description: Putative LWD1, Description = WD repeat-containing protein LWD1, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf02048_79707-83338' '(at4g17230 : 603.0) Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family.; SCARECROW-like 13 (SCL13); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: scarecrow-like 5 (TAIR:AT1G50600.1); Has 2512 Blast hits to 2467 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 525.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 342.0) no description available & (reliability: 1206.0) & (original description: Putative SCL13, Description = Scarecrow-like protein 13, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf02068_484938-508039' '(at4g32551 : 333.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (gnl|cdd|29257 : 150.0) no description available & (gnl|cdd|35487 : 136.0) no description available & (reliability: 666.0) & (original description: Putative LUG, Description = Transcriptional corepressor LEUNIG, PFAM = PF00400;PF00400;PF00400;PF08513)' T '33.99' 'development.unspecified' 'niben101scf02073_798308-819157' '(at1g73720 : 887.0) Encodes SMU1, a protein involved in RNA splicing.; SUPPRESSORS OF MEC-8 AND UNC-52 1 (SMU1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 78641 Blast hits to 32338 proteins in 893 species: Archae - 70; Bacteria - 10419; Metazoa - 31204; Fungi - 16808; Plants - 9656; Viruses - 6; Other Eukaryotes - 10478 (source: NCBI BLink). & (gnl|cdd|35496 : 879.0) no description available & (gnl|cdd|29257 : 187.0) no description available & (p93107|pf20_chlre : 92.8) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1774.0) & (original description: Putative SMU1, Description = Suppressor of mec-8 and unc-52 protein homolog 1, PFAM = PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf02073_1014291-1020204' '(at4g09960 : 244.0) a MADS box transcription factor expressed in the carpel and ovules; SEEDSTICK (STK); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, ovule development, carpel development; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT2G42830.2). & (q40872|ag_pangi : 231.0) Floral homeotic protein AGAMOUS (GAG2) - Panax ginseng (Korean ginseng) & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 98.9) no description available & (reliability: 452.0) & (original description: Putative AGL11, Description = Agamous-like MADS-box protein AGL11, PFAM = PF00319;PF01486)' T '33.99' 'development.unspecified' 'niben101scf02090_600112-607360' '(at1g34190 : 347.0) NAC domain containing protein 17 (NAC017); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 16 (TAIR:AT1G34180.1); Has 2927 Blast hits to 2911 proteins in 78 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2919; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|66085 : 211.0) no description available & (q7gcl7|nac74_orysa : 171.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 694.0) & (original description: Putative NAC017, Description = NAC domain-containing protein 17, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf02090_713683-717929' '(gnl|cdd|71337 : 177.0) no description available & (at4g00650 : 107.0) Encodes a major determinant of natural variation in Arabidopsis flowering time. Dominant alleles of FRI confer a vernalization requirement causing plants to overwinter vegetatively. Many early flowering accessions carry loss-of-function fri alleles .Twenty distinct haplotypes that contain non-functional FRI alleles have been identified and the distribution analyzed in over 190 accessions. The common lab strains- Col and Ler each carry loss of function mutations in FRI.; FRIGIDA (FRI); CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT5G48385.1); Has 841 Blast hits to 841 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 841; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative PGSC0003DMG400031151, Description = Putative ovule protein, PFAM = PF07899)' T '33.99' 'development.unspecified' 'niben101scf02108_91515-97379' '(at3g17730 : 357.0) NAC domain containing protein 57 (NAC057); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 28 (TAIR:AT1G65910.1); Has 3040 Blast hits to 3029 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3040; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 211.0) no description available & (q7gcl7|nac74_orysa : 206.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 714.0) & (original description: Putative NAC5, Description = NAC domain protein, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf02142_196152-211055' '(at2g19520 : 737.0) Controls flowering.; FVE; FUNCTIONS IN: metal ion binding; INVOLVED IN: flower development, unidimensional cell growth, trichome morphogenesis, leaf morphogenesis; LOCATED IN: nucleolus, nucleus, CUL4 RING ubiquitin ligase complex, cytoplasm; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Histone-binding protein RBBP4 (InterPro:IPR022052), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: nucleosome/chromatin assembly factor group C5 (TAIR:AT4G29730.1); Has 27643 Blast hits to 19007 proteins in 669 species: Archae - 18; Bacteria - 3366; Metazoa - 11144; Fungi - 6221; Plants - 3473; Viruses - 0; Other Eukaryotes - 3421 (source: NCBI BLink). & (gnl|cdd|35485 : 410.0) no description available & (gnl|cdd|29257 : 105.0) no description available & (reliability: 1474.0) & (original description: Putative MSI4, Description = WD-40 repeat-containing protein MSI4, PFAM = PF12265;PF00400;PF00400;PF08662)' T '33.99' 'development.unspecified' 'niben101scf02151_124111-141293' '(q41276|ap1_sinal : 246.0) Floral homeotic protein APETALA1 (MADS C) - Sinapis alba (White mustard) (Brassica hirta) & (at1g69120 : 238.0) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.; APETALA1 (AP1); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 8031 Blast hits to 8015 proteins in 981 species: Archae - 10; Bacteria - 56; Metazoa - 785; Fungi - 329; Plants - 6623; Viruses - 2; Other Eukaryotes - 226 (source: NCBI BLink). & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 101.0) no description available & (reliability: 476.0) & (original description: Putative squa, Description = Squamosa protein, PFAM = PF01486;PF00319)' T '33.99' 'development.unspecified' 'niben101scf02155_235665-259821' '(at5g14120 : 619.0) Major facilitator superfamily protein; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G01930.2); Has 2697 Blast hits to 2602 proteins in 809 species: Archae - 24; Bacteria - 1400; Metazoa - 12; Fungi - 267; Plants - 611; Viruses - 0; Other Eukaryotes - 383 (source: NCBI BLink). & (gnl|cdd|70288 : 278.0) no description available & (reliability: 1238.0) & (original description: Putative Sb07g026140, Description = Putative uncharacterized protein Sb07g026140, PFAM = PF06813)' T '33.99' 'development.unspecified' 'niben101scf02159_82429-89655' '(at2g27040 : 793.0) AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens.; ARGONAUTE 4 (AGO4); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Argonaute family protein (TAIR:AT5G21150.1). & (gnl|cdd|36259 : 519.0) no description available & (gnl|cdd|72942 : 352.0) no description available & (reliability: 1558.0) & (original description: Putative AGO4, Description = Eukaryotic translation initiation factor 2c, putative, PFAM = PF02170;PF08699;PF16486;PF02171)' T '33.99' 'development.unspecified' 'niben101scf02159_82686-89392' '(at2g27040 : 831.0) AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens.; ARGONAUTE 4 (AGO4); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Argonaute family protein (TAIR:AT5G21150.1). & (gnl|cdd|36259 : 554.0) no description available & (gnl|cdd|72942 : 381.0) no description available & (reliability: 1614.0) & (original description: Putative AGO4B, Description = Protein argonaute 4B, PFAM = PF16488;PF16486;PF02170;PF02171;PF08699)' T '33.99' 'development.unspecified' 'niben101scf02174_17590-20341' '(at2g35150 : 375.0) EXORDIUM like 1 (EXL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: EXORDIUM like 5 (TAIR:AT2G17230.1); Has 396 Blast hits to 396 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 394; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68252 : 301.0) no description available & (reliability: 704.0) & (original description: Putative EXL7, Description = Protein EXORDIUM-like 7, PFAM = PF04674)' T '33.99' 'development.unspecified' 'niben101scf02187_166708-176846' '(at5g14250 : 469.0) Encodes subunit 3 of the COP9 signalosome.; CONSTITUTIVE PHOTOMORPHOGENIC 13 (COP13); CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); Has 402 Blast hits to 401 proteins in 151 species: Archae - 0; Bacteria - 0; Metazoa - 218; Fungi - 81; Plants - 54; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|37793 : 355.0) no description available & (reliability: 938.0) & (original description: Putative CSN3, Description = COP9 signalosome complex subunit 3, PFAM = PF01399)' T '33.99' 'development.unspecified' 'niben101scf02188_304608-310101' '(gnl|cdd|67150 : 327.0) no description available & (q8s4w7|gai1_vitvi : 300.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at1g66350 : 295.0) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.; RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 534.0) & (original description: Putative ATA, Description = Transcription factor, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf02210_176340-179262' '(at5g13180 : 252.0) Encodes a NAC domain transcription factor that interacts with VND7 and negatively regulates xylem vessel formation.; NAC domain containing protein 83 (NAC083); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 41 (TAIR:AT2G33480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66085 : 193.0) no description available & (q53nf7|nac71_orysa : 166.0) NAC domain-containing protein 71 (ONAC071) - Oryza sativa (Rice) & (reliability: 504.0) & (original description: Putative NAC083, Description = NAC domain-containing protein 83, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf02212_231748-258349' '(at5g51230 : 662.0) Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Forms a complex with FIE, CLF, and MSI1. This complex modulates the expression of target genes including AG, PI and AP3.; EMBRYONIC FLOWER 2 (EMF2); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Polycomb protein, VEFS-Box (InterPro:IPR019135); BEST Arabidopsis thaliana protein match is: VEFS-Box of polycomb protein (TAIR:AT4G16845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37561 : 225.0) no description available & (reliability: 1324.0) & (original description: Putative EMF2, Description = Polycomb group protein EMBRYONIC FLOWER 2, PFAM = PF09733)' T '33.99' 'development.unspecified' 'niben101scf02212_238116-245633' '(at5g51230 : 171.0) Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Forms a complex with FIE, CLF, and MSI1. This complex modulates the expression of target genes including AG, PI and AP3.; EMBRYONIC FLOWER 2 (EMF2); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Polycomb protein, VEFS-Box (InterPro:IPR019135); BEST Arabidopsis thaliana protein match is: VEFS-Box of polycomb protein (TAIR:AT4G16845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative EMF2, Description = Polycomb group protein EMBRYONIC FLOWER 2, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf02217_186938-207854' '(at4g16440 : 676.0) Encodes a [FeFe]-hydrogenase-like protein named Gollum (for Growth in different Oxygen LeveLs inflUences Morphogenesis). Heterologous expression of Gollum in E. coli indicates that it probably contains two [Fe-S] clusters with different magnetic properties. Sequence alignment analysis indicates that these two clusters would be topologically equivalent to the mesial and proximal [Fe-S] centers of [FeFe]-hydrogenases. Knockdown mutants (RNAi) show a dwarf phenotype at the normal atmospheric partial oxygen pressure of 21 kPa. This dwarf phenotype could be rescued by growing the plant under low oxygen pressure (5kPa), suggesting a role for this gene in oxygen sensing.; ferredoxin hydrogenases; CONTAINS InterPro DOMAIN/s: Iron hydrogenase, large subunit, C-terminal (InterPro:IPR004108), Iron hydrogenase (InterPro:IPR009016), Iron hydrogenase, small subunit-like (InterPro:IPR003149); Has 2574 Blast hits to 2544 proteins in 612 species: Archae - 1; Bacteria - 1826; Metazoa - 221; Fungi - 188; Plants - 72; Viruses - 0; Other Eukaryotes - 266 (source: NCBI BLink). & (gnl|cdd|37650 : 452.0) no description available & (gnl|cdd|86178 : 264.0) no description available & (reliability: 1352.0) & (original description: Putative NAR1, Description = Protein NAR1, PFAM = PF02906;PF02256)' T '33.99' 'development.unspecified' 'niben101scf02218_66230-70890' '(at1g21460 : 297.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT5G53190.1); Has 988 Blast hits to 930 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 221; Fungi - 0; Plants - 643; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36836 : 178.0) no description available & (reliability: 594.0) & (original description: Putative std1, Description = Bidirectional sugar transporter SWEET, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf02218_186746-198230' '(at1g21460 : 204.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT5G53190.1); Has 988 Blast hits to 930 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 221; Fungi - 0; Plants - 643; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36836 : 156.0) no description available & (reliability: 408.0) & (original description: Putative SWEET1, Description = Bidirectional sugar transporter SWEET1, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf02244_219903-225098' '(at1g70260 : 312.0) nodulin MtN21 /EamA-like transporter family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: Nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G60050.1); Has 1237 Blast hits to 1229 proteins in 44 species: Archae - 0; Bacteria - 23; Metazoa - 0; Fungi - 0; Plants - 1190; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 624.0) & (original description: Putative At1g70260, Description = WAT1-related protein At1g70260, PFAM = PF00892)' T '33.99' 'development.unspecified' 'niben101scf02246_146527-150269' '(at2g28120 : 724.0) Major facilitator superfamily protein; INVOLVED IN: N-terminal protein myristoylation, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G39210.1); Has 3034 Blast hits to 2940 proteins in 680 species: Archae - 38; Bacteria - 1235; Metazoa - 42; Fungi - 225; Plants - 608; Viruses - 0; Other Eukaryotes - 886 (source: NCBI BLink). & (gnl|cdd|70288 : 282.0) no description available & (reliability: 1448.0) & (original description: Putative At2g28120, Description = At2g28120/F24D13.9, PFAM = PF06813)' T '33.99' 'development.unspecified' 'niben101scf02249_316601-320543' '(at4g33270 : 688.0) putative cdc20 protein (CDC20.1); CDC20.1; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT4G33260.1); Has 49595 Blast hits to 24757 proteins in 709 species: Archae - 60; Bacteria - 7548; Metazoa - 19325; Fungi - 10981; Plants - 5978; Viruses - 0; Other Eukaryotes - 5703 (source: NCBI BLink). & (gnl|cdd|35526 : 459.0) no description available & (gnl|cdd|29257 : 146.0) no description available & (reliability: 1340.0) & (original description: Putative fzy, Description = Cell division cycle protein 20, PFAM = PF12894;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf02293_12793-38557' '(at3g13300 : 926.0) Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development.; VARICOSE (VCS); FUNCTIONS IN: protein homodimerization activity, nucleotide binding; INVOLVED IN: mRNA catabolic process, deadenylation-independent decapping of nuclear-transcribed mRNA, leaf morphogenesis; LOCATED IN: cytosol, nucleus, cytoplasmic mRNA processing body; EXPRESSED IN: whole plant, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: varicose-related (TAIR:AT3G13290.1); Has 885 Blast hits to 799 proteins in 264 species: Archae - 2; Bacteria - 218; Metazoa - 230; Fungi - 185; Plants - 114; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|37127 : 668.0) no description available & (reliability: 1852.0) & (original description: Putative EDC4, Description = Varicose-related protein, PFAM = PF16529)' T '33.99' 'development.unspecified' 'niben101scf02293_249000-253694' '(at3g13340 : 687.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G55680.1). & (gnl|cdd|29257 : 85.0) no description available & (reliability: 1374.0) & (original description: Putative gbp3, Description = GAMYB-binding protein, PFAM = PF00400)' T '33.99' 'development.unspecified' 'niben101scf02298_695725-698465' '(at4g21510 : 107.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G05010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative)' T '33.99' 'development.unspecified' 'niben101scf02318_348246-352201' '(at5g53950 : 307.0) Transcriptional activator of the NAC gene family, with CUC1 redundantly required for embryonic apical meristem formation, cotyledon separation and expression of STM. Proper timing of CUC2 expression is required to maintain the phyllotactic pattern initiated in the meristem. CUC2 expression in leaf sinus region is required for serration and the extent of serration is modulated by mir164A mediated repression of CUC2.; CUP-SHAPED COTYLEDON 2 (CUC2); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT3G15170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66085 : 215.0) no description available & (q5cd17|nac77_orysa : 214.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 614.0) & (original description: Putative nam, Description = NAM protein, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf02335_493506-500540' '(at5g59460 : 86.7) scarecrow-like transcription factor 11 (SCL11); CONTAINS InterPro DOMAIN/s: M-phase phosphoprotein 6 (InterPro:IPR019324); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative At5g59460, Description = At5g59460, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf02340_617695-621364' '(at1g61110 : 253.0) NAC domain containing protein 25 (NAC025); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 2 (TAIR:AT3G15510.1); Has 3019 Blast hits to 3014 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3011; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q7f2l3|nac48_orysa : 228.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (gnl|cdd|66085 : 220.0) no description available & (reliability: 506.0) & (original description: Putative JA, Description = NAC domain-containing protein 29, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf02357_87155-95435' '(q40872|ag_pangi : 273.0) Floral homeotic protein AGAMOUS (GAG2) - Panax ginseng (Korean ginseng) & (at4g18960 : 267.0) Floral homeotic gene encoding a MADS domain transcription factor. Specifies floral meristem and carpel and stamen identity. Binds CArG box sequences. It is the only C function gene. It interacts genetically with the other homeotic genes to specify the floral organs.; AGAMOUS (AG); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: stamen development, maintenance of floral organ identity, leaf development, carpel development; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT3G58780.3). & (gnl|cdd|29020 : 133.0) no description available & (gnl|cdd|35238 : 95.1) no description available & (reliability: 534.0) & (original description: Putative fbp6, Description = Fbp6 protein, PFAM = PF01486;PF00319)' T '33.99' 'development.unspecified' 'niben101scf02360_315222-324234' '(at3g61790 : 536.0) Protein with RING/U-box and TRAF-like domains; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: multicellular organismal development, ubiquitin-dependent protein catabolic process, protein ubiquitination; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Seven-in-absentia protein, TRAF-like domain (InterPro:IPR018121), Zinc finger, SIAH-type (InterPro:IPR013010), Zinc finger, RING-type (InterPro:IPR001841), Seven In Absentia Homolog-type (InterPro:IPR013323), Seven-in-absentia protein, sina (InterPro:IPR004162), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT4G27880.1); Has 1836 Blast hits to 1817 proteins in 706 species: Archae - 0; Bacteria - 0; Metazoa - 1264; Fungi - 11; Plants - 486; Viruses - 2; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|38212 : 316.0) no description available & (gnl|cdd|86255 : 273.0) no description available & (q8t3y0|sinal_drome : 142.0) Probable E3 ubiquitin-protein ligase sina-like CG13030 (EC 6.3.2.-) - Drosophila melanogaster (Fruit fly) & (reliability: 1072.0) & (original description: Putative SINAT3, Description = E3 ubiquitin-protein ligase SINAT3, PFAM = PF03145)' T '33.99' 'development.unspecified' 'niben101scf02360_419334-422251' '(at2g34980 : 289.0) Encodes a putative phosphatidylinositol-glycan synthase subunit C gene. It is involved in the first step of the glycosylphosphatidylinositol (GPI) biosynthetic pathway.; SETH1; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol N-acetylglucosaminyltransferase (InterPro:IPR009450); Has 335 Blast hits to 331 proteins in 171 species: Archae - 0; Bacteria - 0; Metazoa - 120; Fungi - 117; Plants - 38; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|38269 : 207.0) no description available & (gnl|cdd|69926 : 176.0) no description available & (reliability: 578.0) & (original description: Putative SETH1, Description = Phosphatidylinositol glycan, class C, PFAM = PF06432)' T '33.99' 'development.unspecified' 'niben101scf02363_92765-104284' '(at2g19520 : 725.0) Controls flowering.; FVE; FUNCTIONS IN: metal ion binding; INVOLVED IN: flower development, unidimensional cell growth, trichome morphogenesis, leaf morphogenesis; LOCATED IN: nucleolus, nucleus, CUL4 RING ubiquitin ligase complex, cytoplasm; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Histone-binding protein RBBP4 (InterPro:IPR022052), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: nucleosome/chromatin assembly factor group C5 (TAIR:AT4G29730.1); Has 27643 Blast hits to 19007 proteins in 669 species: Archae - 18; Bacteria - 3366; Metazoa - 11144; Fungi - 6221; Plants - 3473; Viruses - 0; Other Eukaryotes - 3421 (source: NCBI BLink). & (gnl|cdd|35485 : 418.0) no description available & (gnl|cdd|29257 : 105.0) no description available & (reliability: 1450.0) & (original description: Putative MSI4, Description = WD-40 repeat-containing protein MSI4, PFAM = PF00400;PF00400;PF00400;PF00400;PF12265)' T '33.99' 'development.unspecified' 'niben101scf02376_50603-69192' '(gnl|cdd|68610 : 238.0) no description available & (at1g70670 : 216.0) Caleosin-related family protein; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: Caleosin-related family protein (TAIR:AT1G70680.1); Has 341 Blast hits to 336 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 60; Plants - 278; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative PXG4, Description = Probable peroxygenase 4, PFAM = PF05042)' T '33.99' 'development.unspecified' 'niben101scf02381_844338-852116' '(at3g20070 : 177.0) Encodes a plant-specific protein of unknown function. Mutant embryos contain at most four small cells. The endosperm nucleoli are enlarged. Gene is expressed in siliques based on EST information.; TITAN9 (TTN9); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy, endosperm development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative TTN9, Description = Protein titan9, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf02390_271248-274985' '(at2g42840 : 133.0) Encodes a putative extracellular proline-rich protein is exclusively expressed in the L1 layer of vegetative, inflorescence and floral meristems and the protoderm of organ primordia.; protodermal factor 1 (PDF1); Has 74620 Blast hits to 36810 proteins in 1713 species: Archae - 153; Bacteria - 12776; Metazoa - 27126; Fungi - 11565; Plants - 10582; Viruses - 2385; Other Eukaryotes - 10033 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative BnaC04g52630D, Description = BnaC04g52630D protein, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf02401_53023-67347' '(at1g48635 : 404.0) peroxin 3 (PEX3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: peroxisome organization; LOCATED IN: mitochondrion, peroxisome, integral to peroxisomal membrane; CONTAINS InterPro DOMAIN/s: Peroxin-3 (InterPro:IPR006966); BEST Arabidopsis thaliana protein match is: peroxin 3-1 (TAIR:AT3G18160.1); Has 293 Blast hits to 293 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 111; Plants - 49; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|39645 : 232.0) no description available & (gnl|cdd|68456 : 108.0) no description available & (reliability: 762.0) & (original description: Putative PEX3, Description = Peroxisome biogenesis protein 3-2, PFAM = PF04882)' T '33.99' 'development.unspecified' 'niben101scf02401_102076-107090' '(p93340|gblp_nicpl : 606.0) Guanine nucleotide-binding protein subunit beta-like protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g18130 : 504.0) Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1C has no phenotype on its own and probably acts redundantly with RACK1A and RACK1B.; receptor for activated C kinase 1C (RACK1C_AT); FUNCTIONS IN: nucleotide binding; INVOLVED IN: shoot development, root development; LOCATED IN: nucleolus, heterotrimeric G-protein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B (TAIR:AT1G48630.1); Has 88582 Blast hits to 37057 proteins in 965 species: Archae - 74; Bacteria - 10338; Metazoa - 34853; Fungi - 20136; Plants - 11319; Viruses - 6; Other Eukaryotes - 11856 (source: NCBI BLink). & (gnl|cdd|35500 : 433.0) no description available & (gnl|cdd|29257 : 226.0) no description available & (reliability: 1008.0) & (original description: Putative ARCA, Description = Guanine nucleotide-binding protein subunit beta-like protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf02408_50611-55962' '(at3g19240 : 809.0) Vacuolar import/degradation, Vid27-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Vacuolar import/degradation, Vid27-related (InterPro:IPR013863); BEST Arabidopsis thaliana protein match is: Vacuolar import/degradation, Vid27-related protein (TAIR:AT4G33400.1); Has 312 Blast hits to 307 proteins in 136 species: Archae - 0; Bacteria - 1; Metazoa - 11; Fungi - 168; Plants - 82; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|37606 : 613.0) no description available & (gnl|cdd|71981 : 151.0) no description available & (reliability: 1618.0) & (original description: Putative dem, Description = Dem protein, PFAM = PF08553)' T '33.99' 'development.unspecified' 'niben101scf02413_234713-239708' '(q53nf7|nac71_orysa : 180.0) NAC domain-containing protein 71 (ONAC071) - Oryza sativa (Rice) & (at1g61110 : 178.0) NAC domain containing protein 25 (NAC025); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 2 (TAIR:AT3G15510.1); Has 3019 Blast hits to 3014 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3011; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|66085 : 169.0) no description available & (reliability: 356.0) & (original description: Putative AF1, Description = NAC domain-containing protein 2, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf02420_341173-347058' '(at1g12260 : 302.0) Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.; NAC 007 (NAC007); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: Arabidopsis NAC domain containing protein 26 (TAIR:AT1G62700.1); Has 3158 Blast hits to 3153 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 2; Plants - 3027; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (gnl|cdd|66085 : 208.0) no description available & (q5z6b6|nac76_orysa : 182.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (reliability: 604.0) & (original description: Putative NAC037, Description = NAC domain-containing protein 37, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf02423_29651-34449' '(at1g71930 : 285.0) Encodes a NAC-domain transcription factor with transcriptional activation activity that is involved in xylem formation. Induces transdifferentiation of various cells into protoxylem vessel elements. Located in the nucleus. Expression induced in the presence of auxin, cytokinin and brassinosteroids.; vascular related NAC-domain protein 7 (VND7); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: vascular related NAC-domain protein 1 (TAIR:AT2G18060.1); Has 3020 Blast hits to 3015 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 3006; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|66085 : 203.0) no description available & (q5z6b6|nac76_orysa : 198.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (reliability: 570.0) & (original description: Putative NAC030, Description = NAC domain-containing protein 30, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf02425_64163-78832' '(at5g20520 : 491.0) Encodes a Bem46-like protein. WAV2 negatively regulates root bending when roots alter their growth direction. It's not involved in sensing environmental stimuli (e.g. gravity, light, water, touch).; WAVY GROWTH 2 (WAV2); FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: root development; LOCATED IN: organelle inner membrane, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G13610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39592 : 237.0) no description available & (reliability: 982.0) & (original description: Putative WAV2, Description = Bem46-family protein WAV2, PFAM = PF00326)' T '33.99' 'development.unspecified' 'niben101scf02451_337485-346315' '(at3g24440 : 466.0) Encodes Vernalization Insensitive 3-like 1 (VIL1). VIL1 is involved in the photoperiod and vernalization of Arabidopsis by regulating expression of the related floral repressors Flowering Locus C (FLC) and Flowering Locus M (FLM). VIL1, along with VIN3 (Vernalization Insensitive 3) is necessary for the chromatin modification to FLC and FLM.; VERNALIZATION 5 (VRN5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: histone methylation, chromatin modification, vernalization response, regulation of flower development; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423, plant (InterPro:IPR004082), Fibronectin, type III-like fold (InterPro:IPR008957), Fibronectin, type III (InterPro:IPR003961); BEST Arabidopsis thaliana protein match is: Fibronectin type III domain-containing protein (TAIR:AT5G57380.1); Has 273 Blast hits to 232 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 0; Plants - 265; Viruses - 1; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 932.0) & (original description: Putative VIL1, Description = VIN3-like protein 1, PFAM = PF07227)' T '33.99' 'development.unspecified' 'niben101scf02455_220233-231397' '(at1g15750 : 1851.0) Encodes a protein with several WD40 repeats at the C-terminus and predicted protein-protein interaction domains at the N-terminus. Together with the TOPLESS-RELATED PROTEINS (TPRs), it is thought to be involved in transcriptional repression of root-promoting genes in the top help of the embryo during the transition stage of embryogenesis. The ability of IAA12 to repress transcription is diminished in a tpl-1 mutant background.; TOPLESS (TPL); FUNCTIONS IN: protein binding, transcription repressor activity, protein homodimerization activity; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, primary shoot apical meristem specification, jasmonic acid mediated signaling pathway; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TOPLESS-related 1 (TAIR:AT1G80490.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35487 : 163.0) no description available & (gnl|cdd|29257 : 125.0) no description available & (reliability: 3702.0) & (original description: Putative TPL, Description = Protein TOPLESS, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf02459_178023-192339' '(at4g10350 : 238.0) NAC domain protein. SMB, BRN1, and BRN2 act to regulate root cap maturation, in a partially redundant fashion.BRN1 and BRN2, control the cell wall maturation processes that are required to detach root cap layers from the root.; NAC domain containing protein 70 (NAC070); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 15 (TAIR:AT1G33280.1); Has 2970 Blast hits to 2965 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2970; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q5z6b6|nac76_orysa : 197.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (gnl|cdd|66085 : 192.0) no description available & (reliability: 476.0) & (original description: Putative nst1, Description = NAC domain-containing protein 43, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf02460_645349-648181' '(at1g74940 : 120.0) Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT1G19200.1); Has 483 Blast hits to 483 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 483; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative F383_25395, Description = Cyclin-dependent kinase 1, PFAM = PF04570)' T '33.99' 'development.unspecified' 'niben101scf02502_608520-612223' '(at2g39210 : 672.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G28120.1); Has 3072 Blast hits to 2927 proteins in 685 species: Archae - 32; Bacteria - 1223; Metazoa - 36; Fungi - 288; Plants - 601; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink). & (gnl|cdd|70288 : 279.0) no description available & (reliability: 1344.0) & (original description: Putative Sb08g014860, Description = Putative uncharacterized protein Sb08g014860, PFAM = PF07690;PF06813)' T '33.99' 'development.unspecified' 'niben101scf02508_676444-684316' '(at5g55540 : 1801.0) Encodes a large plant-specific protein of unknown function, with conserved domains also found in a variety of signaling proteins, In trn mutants, the leaf venation network had a severely reduced complexity: incomplete loops, no tertiary or quaternary veins, and vascular islands. The leaf laminas were asymmetric and narrow because of a severely reduced cell number. TRN1 is required for the maintenance of both the radial pattern of tissue differentiation in the root and for the subsequent circumferential pattern within the epidermis. Double mutant analysis showed that TRN1 and TRN2 act in the same pathway.; TORNADO 1 (TRN1); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT1G10510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39509 : 96.7) no description available & (reliability: 3602.0) & (original description: Putative TRN1, Description = Protein TORNADO 1, PFAM = PF13516;PF13516;PF16095;PF08477)' T '33.99' 'development.unspecified' 'niben101scf02511_569169-573240' '(at5g53190 : 304.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT1G21460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36836 : 191.0) no description available & (reliability: 608.0) & (original description: Putative SWEET3, Description = Bidirectional sugar transporter SWEET3, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf02513_10773-17965' '(at4g36860 : 201.0) LIM domain-containing protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Ubiquitin interacting motif (InterPro:IPR003903), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: DA1 (TAIR:AT1G19270.1); Has 6004 Blast hits to 4271 proteins in 323 species: Archae - 7; Bacteria - 228; Metazoa - 4096; Fungi - 190; Plants - 320; Viruses - 67; Other Eukaryotes - 1096 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative , Description = , PFAM = PF12315)' T '33.99' 'development.unspecified' 'niben101scf02530_111382-117474' '(at1g25270 : 264.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G68170.1); Has 2335 Blast hits to 2323 proteins in 458 species: Archae - 9; Bacteria - 937; Metazoa - 4; Fungi - 9; Plants - 1230; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink). & (reliability: 528.0) & (original description: Putative At1g25270, Description = WAT1-related protein At1g25270, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf02540_45858-52030' '(at5g57390 : 365.0) Encodes a member of the AP2 family of transcriptional regulators.May be involved in germination and seedling growth. Mutants are resistant to ABA analogs and are resistant to high nitrogen concentrations.essential for the developmental transition between the embryonic and vegetative phases in plants.Overexpression results in the formation of somatic embryos on cotyledons.; AINTEGUMENTA-like 5 (AIL5); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G20840.1); Has 9099 Blast hits to 5771 proteins in 325 species: Archae - 0; Bacteria - 38; Metazoa - 238; Fungi - 101; Plants - 7378; Viruses - 6; Other Eukaryotes - 1338 (source: NCBI BLink). & (q8lsn2|bbm2_brana : 331.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (gnl|cdd|47695 : 94.5) no description available & (reliability: 730.0) & (original description: Putative AIL5, Description = AIL5, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'niben101scf02553_195484-213770' '(at5g08290 : 204.0) Encodes Dim1 homolog.; YELLOW-LEAF-SPECIFIC GENE 8 (YLS8); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), mRNA splicing factor, thioredoxin-like U5 snRNP (InterPro:IPR004123), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: mRNA splicing factor, thioredoxin-like U5 snRNP (TAIR:AT3G24730.1); Has 564 Blast hits to 564 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 221; Fungi - 146; Plants - 112; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|66627 : 172.0) no description available & (gnl|cdd|38624 : 171.0) no description available & (reliability: 408.0) & (original description: Putative dim1, Description = Thioredoxin-like protein 4A, PFAM = PF02966)' T '33.99' 'development.unspecified' 'niben101scf02571_283632-289654' '(at1g74780 : 530.0) Nodulin-like / Major Facilitator Superfamily protein; INVOLVED IN: transmembrane transport; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Nodulin-like / Major Facilitator Superfamily protein (TAIR:AT1G18940.1); Has 3116 Blast hits to 3052 proteins in 955 species: Archae - 29; Bacteria - 1753; Metazoa - 40; Fungi - 307; Plants - 604; Viruses - 0; Other Eukaryotes - 383 (source: NCBI BLink). & (gnl|cdd|70288 : 221.0) no description available & (reliability: 1060.0) & (original description: Putative Sb08g023130, Description = Putative uncharacterized protein Sb08g023130, PFAM = PF06813;PF07690)' T '33.99' 'development.unspecified' 'niben101scf02571_290038-305814' '(at1g74780 : 587.0) Nodulin-like / Major Facilitator Superfamily protein; INVOLVED IN: transmembrane transport; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Nodulin-like / Major Facilitator Superfamily protein (TAIR:AT1G18940.1); Has 3116 Blast hits to 3052 proteins in 955 species: Archae - 29; Bacteria - 1753; Metazoa - 40; Fungi - 307; Plants - 604; Viruses - 0; Other Eukaryotes - 383 (source: NCBI BLink). & (gnl|cdd|70288 : 204.0) no description available & (reliability: 1174.0) & (original description: Putative BnaA07g22050D, Description = BnaA07g22050D protein, PFAM = PF06813)' T '33.99' 'development.unspecified' 'niben101scf02595_296006-336395' '(at1g58250 : 3204.0) SABRE, putative gene of unknown function, homologous to maize apt1 gene. Required for normal cell expansion in the root cortex. The sabre mutation results in abnormal cell expansion. Encodes a rare message; very low level of expression was detected in roots and shoots.; SABRE (SAB); CONTAINS InterPro DOMAIN/s: Protein of unknown function FMP27, domain-6, C-terminal (InterPro:IPR019443), Protein of unknown function FMP27, domain-4 (InterPro:IPR019441); BEST Arabidopsis thaliana protein match is: Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain (TAIR:AT5G49680.2). & (gnl|cdd|37121 : 1300.0) no description available & (reliability: 6408.0) & (original description: Putative SAB, Description = Protein SABRE, PFAM = PF10347;PF10351)' T '33.99' 'development.unspecified' 'niben101scf02621_458511-464198' '(at2g16780 : 545.0) Encodes a WD-40 repeat protein similar to yeast MSI1.; MULTICOPY SUPPRESSOR OF IRA1 2 (MSI2); CONTAINS InterPro DOMAIN/s: Histone-binding protein RBBP4 (InterPro:IPR022052), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT4G35050.1); Has 43623 Blast hits to 25846 proteins in 733 species: Archae - 34; Bacteria - 4140; Metazoa - 17646; Fungi - 10305; Plants - 5712; Viruses - 0; Other Eukaryotes - 5786 (source: NCBI BLink). & (gnl|cdd|35485 : 493.0) no description available & (gnl|cdd|29257 : 120.0) no description available & (reliability: 1090.0) & (original description: Putative MSI2, Description = WD-40 repeat-containing protein MSI2, PFAM = PF12265;PF00400;PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf02622_436767-446489' '(at3g52190 : 437.0) Encodes a plant specific protein structurally related to the SEC12 proteins of the early secretory pathway. Mutation of PHF1 impairs Pi transport. Expression was detected in all tissues, and was induced by Pi starvation. Localized in endoplasmic reticulum (ER), and mutation of PHF1 resulted in ER retention and reduced accumulation of the plasma membrane PHT1;1 transporter.; phosphate transporter traffic facilitator1 (PHF1); FUNCTIONS IN: nucleotide binding; INVOLVED IN: cellular response to phosphate starvation, ER to Golgi vesicle-mediated transport, phosphate transport; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G50550.1); Has 6481 Blast hits to 4280 proteins in 402 species: Archae - 34; Bacteria - 2283; Metazoa - 1521; Fungi - 1505; Plants - 384; Viruses - 0; Other Eukaryotes - 754 (source: NCBI BLink). & (gnl|cdd|35990 : 246.0) no description available & (reliability: 874.0) & (original description: Putative PHF1, Description = SEC12-like protein 1, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf02632_177726-180847' '(at4g28050 : 140.0) Member of TETRASPANIN family; tetraspanin7 (TET7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, conserved site (InterPro:IPR018503), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: tetraspanin8 (TAIR:AT2G23810.1); Has 591 Blast hits to 589 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 150; Fungi - 0; Plants - 430; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative PGSC0003DMG400000657, Description = Senescence-associated family protein, PFAM = PF00335)' T '33.99' 'development.unspecified' 'niben101scf02647_353089-359864' '(at5g35770 : 468.0) A recessive mutation in the Arabidopsis STERILE APETALA (SAP) causes severe aberrations in inflorescence and flower and ovule development.; STERILE APETALA (SAP); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, megasporogenesis; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 936.0) & (original description: Putative SAP, Description = Transcriptional regulator STERILE APETALA, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf02664_87652-91272' '(at1g71930 : 303.0) Encodes a NAC-domain transcription factor with transcriptional activation activity that is involved in xylem formation. Induces transdifferentiation of various cells into protoxylem vessel elements. Located in the nucleus. Expression induced in the presence of auxin, cytokinin and brassinosteroids.; vascular related NAC-domain protein 7 (VND7); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: vascular related NAC-domain protein 1 (TAIR:AT2G18060.1); Has 3020 Blast hits to 3015 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 3006; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (q5z6b6|nac76_orysa : 223.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (gnl|cdd|66085 : 202.0) no description available & (reliability: 606.0) & (original description: Putative VND7, Description = NAC domain-containing protein 7, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf02694_468064-471385' '(at4g37650 : 393.0) Involved in radial organization of the root and shoot axial organs. Essential for normal shoot gravitropism. The protein moves in a highly specific manner from the cells of the stele in which it is synthesized outward. Movement requires sequences within the GRAS and VHIID domains.; SHORT ROOT (SHR); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G49950.1); Has 2470 Blast hits to 2429 proteins in 304 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 15; Plants - 2427; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|67150 : 260.0) no description available & (q8gve1|cigr2_orysa : 160.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (reliability: 786.0) & (original description: Putative GRAS13, Description = GRAS13 protein, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf02706_419626-429918' '(at1g80490 : 1059.0) TOPLESS-related 1 (TPR1); INVOLVED IN: primary shoot apical meristem specification; LOCATED IN: cytosol; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT1G15750.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35487 : 109.0) no description available & (gnl|cdd|29257 : 97.0) no description available & (reliability: 2118.0) & (original description: Putative TPR3, Description = Protein TPR3, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf02734_153699-160774' '(at2g45690 : 375.0) Encodes a protein with similarity to yeast Pep16p, a membrane localized protein involved in peroxisome assembly and protein-trafficking. SSE1 mutant seeds do not accumulate oils and dessicated seeds have a shrunken appearance. Involved in protein and oil body biogenesis. SSE is expressed during seed development, reaching the highest peak in mature siliques. Expression in leaves and roots is low compared to cotyledons and flowers. Located in peroxisomes and endoplasmic reticulum. Homologous to the peroxin PEX16 and complements the pex16 mutants of the yeast Yarrowia lipolytica.; SHRUNKEN SEED 1 (SSE1); CONTAINS InterPro DOMAIN/s: Peroxisome membrane protein, Pex16 (InterPro:IPR013919); Has 261 Blast hits to 259 proteins in 120 species: Archae - 0; Bacteria - 0; Metazoa - 102; Fungi - 93; Plants - 47; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|39746 : 252.0) no description available & (gnl|cdd|72035 : 241.0) no description available & (reliability: 750.0) & (original description: Putative SSE1, Description = AtPEX16, PFAM = PF08610)' T '33.99' 'development.unspecified' 'niben101scf02736_677861-693942' '(q07474|mads2_pethy : 345.0) Floral homeotic protein PMADS 2 - Petunia hybrida (Petunia) & (at5g20240 : 219.0) Floral homeotic gene encoding a MADS domain transcription factor. Required for the specification of petal and stamen identities.; PISTILLATA (PI); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G23260.1); Has 7000 Blast hits to 6999 proteins in 918 species: Archae - 0; Bacteria - 3; Metazoa - 620; Fungi - 300; Plants - 6000; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|29020 : 119.0) no description available & (gnl|cdd|35238 : 89.3) no description available & (reliability: 438.0) & (original description: Putative PMADS2, Description = Floral homeotic protein PMADS 2, PFAM = PF01486;PF00319)' T '33.99' 'development.unspecified' 'niben101scf02738_370470-374128' '(at3g02380 : 276.0) homologous to the flowering-time gene CONSTANS (CO) encoding zinc-finger proteins; CONSTANS-like 2 (COL2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of flower development; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT5G15840.1); Has 3185 Blast hits to 2478 proteins in 141 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2995; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (gnl|cdd|87043 : 83.7) no description available & (reliability: 552.0) & (original description: Putative COL2, Description = Zinc finger protein CONSTANS-LIKE 2, PFAM = PF00643;PF06203)' T '33.99' 'development.unspecified' 'niben101scf02738_753725-757038' '(at5g15710 : 752.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), F-box associated interaction domain (InterPro:IPR017451), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G30950.1); Has 1386 Blast hits to 1382 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1386; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1504.0) & (original description: Putative At5g15710, Description = F-box/kelch-repeat protein At5g15710, PFAM = PF00646)' T '33.99' 'development.unspecified' 'niben101scf02749_552979-555531' '(at1g53903 : 90.9) Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT1G53885.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative glysoja_048695, Description = Linoleate 9S-lipoxygenase-4, PFAM = PF04570)' T '33.99' 'development.unspecified' 'niben101scf02762_105391-108879' '(at5g18270 : 280.0) Arabidopsis NAC domain containing protein 87 (ANAC087); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 46 (TAIR:AT3G04060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5cd17|nac77_orysa : 231.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (gnl|cdd|66085 : 207.0) no description available & (reliability: 560.0) & (original description: Putative nac1, Description = Protein CUP-SHAPED COTYLEDON 2, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf02819_276930-289276' '(at3g15880 : 1713.0) WUS-interacting protein 2 (WSIP2); FUNCTIONS IN: protein binding; INVOLVED IN: primary shoot apical meristem specification; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT1G15750.4). & (gnl|cdd|35487 : 141.0) no description available & (gnl|cdd|29257 : 125.0) no description available & (reliability: 3426.0) & (original description: Putative TPR4, Description = Topless-related protein 4, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf02819_339428-346827' '(at1g52540 : 452.0) Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G15890.1); Has 98543 Blast hits to 97377 proteins in 3831 species: Archae - 68; Bacteria - 11032; Metazoa - 36701; Fungi - 6941; Plants - 30133; Viruses - 293; Other Eukaryotes - 13375 (source: NCBI BLink). & (gnl|cdd|36401 : 371.0) no description available & (q8lpb4|pskr_dauca : 233.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (gnl|cdd|47549 : 166.0) no description available & (reliability: 904.0) & (original description: Putative At3g15890, Description = PTI1-like tyrosine-protein kinase At3g15890, PFAM = PF00069)' T '33.99' 'development.unspecified' 'niben101scf02827_954504-962389' '(at1g32400 : 320.0) TOM2A encodes a 280 amino acid putative four-pass transmembrane protein with a C-terminal farnesylation signal, essential for efficient multiplication of tobacco mosaic viruses.; tobamovirus multiplication 2A (TOM2A); FUNCTIONS IN: protein binding; INVOLVED IN: viral replication complex formation and maintenance; LOCATED IN: vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499); BEST Arabidopsis thaliana protein match is: Tetraspanin family protein (TAIR:AT2G20230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 640.0) & (original description: Putative TOM2A, Description = Tobamovirus multiplication protein 2A, PFAM = PF00335)' T '33.99' 'development.unspecified' 'niben101scf02831_876805-894358' '(at3g13870 : 1157.0) required for regulated cell expansion and normal root hair development. Encodes an evolutionarily conserved protein with putative GTP-binding motifs that is implicated in the control of vesicle trafficking between the endoplasmic reticulum and the Golgi compartments.; ROOT HAIR DEFECTIVE 3 (RHD3); FUNCTIONS IN: GTP binding; INVOLVED IN: root epidermal cell differentiation, plant-type cell wall biogenesis, ER to Golgi vesicle-mediated transport, actin cytoskeleton organization, cell tip growth; LOCATED IN: endoplasmic reticulum, plasma membrane, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Root hair defective 3 GTP-binding (InterPro:IPR008803); BEST Arabidopsis thaliana protein match is: Root hair defective 3 GTP-binding protein (RHD3) (TAIR:AT1G72960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37414 : 1056.0) no description available & (gnl|cdd|69407 : 926.0) no description available & (reliability: 2314.0) & (original description: Putative RHD3, Description = Protein ROOT HAIR DEFECTIVE 3, PFAM = PF05879)' T '33.99' 'development.unspecified' 'niben101scf02840_37892-40988' '(at1g69490 : 303.0) Encodes a member of the NAC transcription factor gene family. It is expressed in floral primordia and upregulated by AP3 and PI. Its expression is associated with leaf senescence.; NAC-like, activated by AP3/PI (NAP); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 25 (TAIR:AT1G61110.1); Has 3046 Blast hits to 3040 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3046; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 233.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 210.0) no description available & (reliability: 606.0) & (original description: Putative NAC029, Description = NAC transcription factor 29, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf02881_160200-165944' '(at3g18400 : 269.0) NAC domain containing protein 58 (NAC058); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 38 (TAIR:AT2G24430.2); Has 3056 Blast hits to 3045 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3049; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|66085 : 217.0) no description available & (q5cd17|nac77_orysa : 207.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 538.0) & (original description: Putative NH15, Description = Nam-like protein 15, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf02891_474225-481018' '(at3g54320 : 273.0) WRINKLED1 encodes transcription factor of the AP2/ERWEBP class. Protein has two plant-specific (AP2/EREB) DNA-binding domains and is involved in the control of storage compound biosynthesis in Arabidopsis. Mutants have wrinkled seed phenotype, due to a defect in the incorporation of sucrose and glucose into triacylglycerols. Transgenic sGsL plants (21-day-old) grown on 6% sucrose for 24 hours had 2-fold increase in levels of expressions (sGsL line carries a single copy of T-DNA containing the Spomin::GUS-Spomin::LUC dual reporter genes in the upper arm of chromosome 5 of ecotype Col-0. The sporamin .minimal. promoter directs sugar-inducible expression of the LUC and GUS reporters in leaves). Regulation by LEC2 promotes fatty acid accumulation during seed maturation.; WRINKLED 1 (WRI1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G79700.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 208.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 91.5) no description available & (reliability: 546.0) & (original description: Putative WRI1, Description = Ethylene-responsive transcription factor WRI1, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'niben101scf02899_729470-732177' '(at3g11650 : 209.0) Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus and spermine. Overexpression of the gene induces the expression of PR-1 gene and shows light-dependent 'speck disease-like' symptom on leaves. The gene product is localized to the chloroplast; NDR1/HIN1-like 2 (NHL2); CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: NDR1/HIN1-like 3 (TAIR:AT5G06320.1); Has 1008 Blast hits to 1007 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1008; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 146.0) no description available & (reliability: 408.0) & (original description: Putative hin1, Description = Harpin inducing protein, PFAM = PF03168)' T '33.99' 'development.unspecified' 'niben101scf02902_521090-530914' '(at1g43650 : 333.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G09380.1). & (reliability: 666.0) & (original description: Putative At1g43650, Description = WAT1-related protein At1g43650, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf02907_653938-660021' '(at3g11220 : 401.0) A subunit of Elongator, a histone acetyl transferase complex, consisting of six subunits (ELP1ñELP6), that copurifies with the elongating RNAPII in yeast and humans. Three Arabidopsis thaliana genes, encoding homologs of the yeast Elongator subunits ELP1, ELP3 (histone acetyl transferase), and ELP4 are responsible for the narrow leaf phenotype in elongata mutants and for reduced root growth that results from a decreased cell division rate.; ELONGATA 1 (ELO1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell proliferation, organ growth; LOCATED IN: Elongator holoenzyme complex; CONTAINS InterPro DOMAIN/s: Elongator complex protein 4 (InterPro:IPR008728); Has 305 Blast hits to 280 proteins in 134 species: Archae - 2; Bacteria - 2; Metazoa - 144; Fungi - 81; Plants - 54; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|86903 : 274.0) no description available & (gnl|cdd|39152 : 260.0) no description available & (reliability: 802.0) & (original description: Putative ELP4, Description = Elongator complex protein 4, PFAM = PF05625)' T '33.99' 'development.unspecified' 'niben101scf02907_732488-752120' '(at4g29860 : 482.0) Encodes a WD repeat protein with seven WD repeat motifs, predicted to function in protein-protein interaction. Mutations caused defects in both embryo and seedling development.; EMBRYO DEFECTIVE 2757 (EMB2757); FUNCTIONS IN: nucleotide binding; INVOLVED IN: acquisition of desiccation tolerance, embryo development, embryo development ending in seed dormancy; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: stem, rosette leaf, fruit, root, cultured cell; EXPRESSED DURING: F mature embryo stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G11160.1); Has 24053 Blast hits to 12842 proteins in 620 species: Archae - 42; Bacteria - 6408; Metazoa - 6694; Fungi - 5230; Plants - 2600; Viruses - 0; Other Eukaryotes - 3079 (source: NCBI BLink). & (gnl|cdd|35543 : 231.0) no description available & (gnl|cdd|29257 : 121.0) no description available & (reliability: 964.0) & (original description: Putative DSE1, Description = Protein DECREASED SIZE EXCLUSION LIMIT 1, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf02907_732503-749230' '(at4g29860 : 262.0) Encodes a WD repeat protein with seven WD repeat motifs, predicted to function in protein-protein interaction. Mutations caused defects in both embryo and seedling development.; EMBRYO DEFECTIVE 2757 (EMB2757); FUNCTIONS IN: nucleotide binding; INVOLVED IN: acquisition of desiccation tolerance, embryo development, embryo development ending in seed dormancy; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: stem, rosette leaf, fruit, root, cultured cell; EXPRESSED DURING: F mature embryo stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G11160.1); Has 24053 Blast hits to 12842 proteins in 620 species: Archae - 42; Bacteria - 6408; Metazoa - 6694; Fungi - 5230; Plants - 2600; Viruses - 0; Other Eukaryotes - 3079 (source: NCBI BLink). & (gnl|cdd|35543 : 83.5) no description available & (reliability: 524.0) & (original description: Putative Os06g0131100, Description = Os06g0131100 protein, PFAM = PF00400)' T '33.99' 'development.unspecified' 'niben101scf02911_705964-709526' '(at4g17230 : 566.0) Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family.; SCARECROW-like 13 (SCL13); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: scarecrow-like 5 (TAIR:AT1G50600.1); Has 2512 Blast hits to 2467 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 500.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 335.0) no description available & (reliability: 1132.0) & (original description: Putative SCL13, Description = Scarecrow-like protein 13, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf02942_56450-64787' '(at1g13980 : 1843.0) Encodes a GDP/GTP exchange factor for small G-proteins of the ADP ribosylation factor (RAF) class, and as regulator of intracellular trafficking. Homologous to Sec7p and YEC2 from yeast. Involved in the specification of apical-basal pattern formation. Essential for cell division, expansion and adhesion. It appears that heteotypic binding between the DCB and C-terminal domains of two GNOM proteins is required for membrane association, however, GNOM appears to exist predominantly as a heterodimer formed through DCB-DCB interactions.; GNOM (GN); FUNCTIONS IN: protein homodimerization activity, GTP:GDP antiporter activity; INVOLVED IN: in 13 processes; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904); BEST Arabidopsis thaliana protein match is: GNOM-like 1 (TAIR:AT5G39500.1). & (gnl|cdd|36146 : 1404.0) no description available & (gnl|cdd|65184 : 265.0) no description available & (reliability: 3686.0) & (original description: Putative GN, Description = ARF guanine-nucleotide exchange factor GNOM, PFAM = PF01369;PF12783)' T '33.99' 'development.unspecified' 'niben101scf02946_79940-84631' '(at1g12060 : 182.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 5 (BAG5); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 6 (TAIR:AT2G46240.1); Has 84 Blast hits to 84 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative BAG5, Description = BAG family molecular chaperone regulator 5, mitochondrial, PFAM = PF02179;PF00612)' T '33.99' 'development.unspecified' 'niben101scf02949_1427770-1452926' '(at4g15920 : 201.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT3G16690.1); Has 980 Blast hits to 942 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 205; Fungi - 0; Plants - 645; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (gnl|cdd|36836 : 179.0) no description available & (reliability: 402.0) & (original description: Putative SWEET17, Description = Bidirectional sugar transporter SWEET17, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf02971_136863-139873' '(at1g17140 : 167.0) Encodes a ROP/RAC effector, designated interactor of constitutive active ROPs 1 (ICR1), that interacts with GTP-bound ROPs. ICR1 is a scaffold mediating formation of protein complexes that are required for cell polarity. ICR1 is comprised of coiled-coil domains and forms complexes with itself and the exocyst vesicle-tethering complex subunit SEC3.; interactor of constitutive active rops 1 (ICR1); BEST Arabidopsis thaliana protein match is: ROP interactive partner 2 (TAIR:AT1G78430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative ICR1, Description = Interactor of constitutive active ROPs 1, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf02972_2447-8049' '(at5g41790 : 108.0) encodes a protein that physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. expression is not regulated by light.; COP1-interactive protein 1 (CIP1); FUNCTIONS IN: protein binding; INVOLVED IN: regulation of protein import into nucleus; LOCATED IN: cytoskeleton, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G64330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35383 : 81.4) no description available & (reliability: 216.0) & (original description: Putative PGSC0003DMG400005787, Description = Putative intracellular protein transport protein USO1-like, PFAM = PF07765)' T '33.99' 'development.unspecified' 'niben101scf02972_431692-445643' '(at4g10850 : 202.0) Nodulin MtN3 family protein; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT1G66770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36836 : 186.0) no description available & (reliability: 404.0) & (original description: Putative LIM7, Description = Bidirectional sugar transporter SWEET, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf02979_430424-434224' '(at5g18270 : 275.0) Arabidopsis NAC domain containing protein 87 (ANAC087); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 46 (TAIR:AT3G04060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5cd17|nac77_orysa : 236.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (gnl|cdd|66085 : 211.0) no description available & (reliability: 550.0) & (original description: Putative NH17, Description = Nam-like protein 17, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf02983_133589-140079' '(at3g49530 : 268.0) Transcription factor that serves as a molecular link between cold signals and pathogen resistance responses. Undergoes proteolytic processing triggered by cold-induced changes in membrane fluidity.; NAC domain containing protein 62 (NAC062); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: TCV-interacting protein (TAIR:AT5G24590.2); Has 2933 Blast hits to 2926 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2931; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 208.0) no description available & (q5z6b6|nac76_orysa : 166.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (reliability: 536.0) & (original description: Putative Nh1, Description = Nam-like protein 1, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf02990_896897-901625' '(at4g37790 : 233.0) Encodes homeobox protein HAT22, member of the HD-Zip II family.; HAT22; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, response to cytokinin stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein family (TAIR:AT2G22800.1); Has 6652 Blast hits to 6630 proteins in 455 species: Archae - 0; Bacteria - 0; Metazoa - 4237; Fungi - 277; Plants - 2018; Viruses - 3; Other Eukaryotes - 117 (source: NCBI BLink). & (gnl|cdd|35704 : 130.0) no description available & (reliability: 466.0) & (original description: Putative HAT22, Description = Homeobox-leucine zipper protein HAT22, PFAM = PF02183;PF00046)' T '33.99' 'development.unspecified' 'niben101scf02996_388627-393943' '(at5g23660 : 231.0) homolog of the Medicago nodulin MTN3; homolog of Medicago truncatula MTN3 (MTN3); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT3G48740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36836 : 217.0) no description available & (gnl|cdd|86234 : 89.0) no description available & (reliability: 462.0) & (original description: Putative SWEET15, Description = Bidirectional sugar transporter SWEET15, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf03028_103543-106710' '(at1g01720 : 362.0) Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA.; ATAF1; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 32 (TAIR:AT1G77450.1); Has 3043 Blast hits to 3037 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3043; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q7f2l3|nac48_orysa : 335.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (gnl|cdd|66085 : 207.0) no description available & (reliability: 724.0) & (original description: Putative NAC002, Description = NAC domain-containing protein 2, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf03038_616313-623639' '(at5g55940 : 240.0) embryo defective 2731 (emb2731); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0172 (InterPro:IPR005366); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0172) (TAIR:AT5G51620.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67291 : 235.0) no description available & (gnl|cdd|38499 : 221.0) no description available & (reliability: 480.0) & (original description: Putative EMB2731, Description = ER membrane protein complex subunit 8/9 homolog, PFAM = PF03665)' T '33.99' 'development.unspecified' 'niben101scf03064_288300-296574' '(at1g79280 : 1108.0) Encodes a 237-kDA protein with similarity to vertebrate Tpr, a long coiled-coil proteins of nuclear pore inner basket filaments. It is localized to the inner surface of the nuclear envelope and is a component of the nuclear pore-associated steps of sumoylation and mRNA export in plants. Mutations affect flowering time regulation and other developmental processes. Probably acts in the same pathway as ESD4 in affecting flowering time, vegetative and inflorescence development.; nuclear pore anchor (NUA); CONTAINS InterPro DOMAIN/s: Tetratricopeptide, MLP1/MLP2-like (InterPro:IPR012929). & (gnl|cdd|39873 : 488.0) no description available & (gnl|cdd|71363 : 118.0) no description available & (reliability: 2216.0) & (original description: Putative NbTPRa, Description = Nuclear pore complex protein TPRa, PFAM = PF07926)' T '33.99' 'development.unspecified' 'niben101scf03070_692905-711482' '(at4g16280 : 365.0) Flowering time control protein (FCA); RNA binding;abscisic acid binding; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), WW/Rsp5/WWP (InterPro:IPR001202), Ribonucleoprotein, BRUNO-like (InterPro:IPR015903), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: flowering time control protein-related / FCA gamma-related (TAIR:AT2G47310.1). & (gnl|cdd|35366 : 288.0) no description available & (gnl|cdd|47687 : 80.7) no description available & (reliability: 730.0) & (original description: Putative FCA, Description = Flowering time control protein FCA, PFAM = PF00076;PF00076;PF00397)' T '33.99' 'development.unspecified' 'niben101scf03072_312502-316215' '(at4g36710 : 432.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT4G00150.1); Has 2023 Blast hits to 1999 proteins in 291 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2019; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|67150 : 263.0) no description available & (q8s4w7|gai1_vitvi : 120.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 864.0) & (original description: Putative SCL15, Description = Scarecrow-like protein 15, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf03076_147022-168785' '(at2g35110 : 2163.0) Component of the WAVE protein complex which act as activators of ARP2/3 complex involved in actin nucleation. Required for trichome morphogenesis. Mutant displays distorted trichomes, a phenotype that can be phenocopied by treatment of WT plants with actin-interacting drugs.; GNARLED (GRL); CONTAINS InterPro DOMAIN/s: Nck-associated protein 1 (InterPro:IPR019137); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6zbh9|nckp1_orysa : 1929.0) Probable protein NAP1 (Nck-associated protein 1) (P125Nap1) (NAP of plants) - Oryza sativa (Rice) & (gnl|cdd|37128 : 1036.0) no description available & (reliability: 4326.0) & (original description: Putative NAP1, Description = Protein NAP1, PFAM = PF09735)' T '33.99' 'development.unspecified' 'niben101scf03085_28054-32429' '(at1g79490 : 1267.0) embryo defective 2217 (EMB2217); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G18900.2); Has 41590 Blast hits to 13375 proteins in 298 species: Archae - 1; Bacteria - 51; Metazoa - 349; Fungi - 749; Plants - 39263; Viruses - 0; Other Eukaryotes - 1177 (source: NCBI BLink). & (q76c99|rf1_orysa : 139.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2534.0) & (original description: Putative EMB2217, Description = Pentatricopeptide repeat-containing protein At1g79490, mitochondrial, PFAM = PF17177;PF01535;PF01535;PF13041)' T '33.99' 'development.unspecified' 'niben101scf03099_339734-345094' '(at5g40240 : 198.0) nodulin MtN21 /EamA-like transporter family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G40230.1). & (reliability: 396.0) & (original description: Putative PGSC0003DMG402004120, Description = WAT1-related protein, PFAM = PF00892)' T '33.99' 'development.unspecified' 'niben101scf03099_463002-469058' '(at1g70260 : 298.0) nodulin MtN21 /EamA-like transporter family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: Nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G60050.1); Has 1237 Blast hits to 1229 proteins in 44 species: Archae - 0; Bacteria - 23; Metazoa - 0; Fungi - 0; Plants - 1190; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 596.0) & (original description: Putative At1g60050, Description = WAT1-related protein, PFAM = PF00892)' T '33.99' 'development.unspecified' 'niben101scf03123_14584-23986' '(at3g28050 : 249.0) nodulin MtN21 /EamA-like transporter family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G40240.1); Has 1917 Blast hits to 1909 proteins in 293 species: Archae - 12; Bacteria - 576; Metazoa - 4; Fungi - 10; Plants - 1200; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative PGSC0003DMG400004118, Description = WAT1-related protein, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf03123_44369-51145' '(at3g28050 : 211.0) nodulin MtN21 /EamA-like transporter family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G40240.1); Has 1917 Blast hits to 1909 proteins in 293 species: Archae - 12; Bacteria - 576; Metazoa - 4; Fungi - 10; Plants - 1200; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative At3g28050, Description = WAT1-related protein At3g28050, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf03147_176437-184789' '(at2g37860 : 415.0) Encodes a protein of unknown function. Mutants have pale leaves, lower cell density in the palisade parenchyma and increased sensitivity to ozone and virulent Pseudomonas syringae; LOWER CELL DENSITY 1 (LCD1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: leaf development; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: reticulata-related 1 (TAIR:AT5G22790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 830.0) & (original description: Putative LCD1, Description = Plant/K8E10-2 protein, PFAM = PF11891)' T '33.99' 'development.unspecified' 'niben101scf03160_103494-107976' '(at5g22380 : 247.0) NAC domain containing protein 90 (NAC090); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 61 (TAIR:AT3G44350.2); Has 2731 Blast hits to 2726 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2731; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 143.0) no description available & (q52qh4|nac68_orysa : 127.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 494.0) & (original description: Putative NAC090, Description = NAC domain-containing protein 90, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf03167_244855-250583' '(at4g12420 : 901.0) Encodes a protein of unknown function involved in directed root tip growth. It is a member of 19-member gene family and is distantly related structurally to the multiple-copper oxidases ascorbate oxidase and laccase, though it lacks the copper-binding domains. The protein is glycosylated and GPI-anchored. It is localized to the plasma membrane and the cell wall. The gene is expressed most strongly in expanding tissues.; SKU5; FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: cell tip growth; LOCATED IN: plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 2 (TAIR:AT5G51480.1). & (gnl|cdd|36477 : 573.0) no description available & (q00624|aso_brana : 489.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 146.0) no description available & (reliability: 1802.0) & (original description: Putative SKU5, Description = Monocopper oxidase-like protein SKU5, PFAM = PF07731;PF00394;PF07732)' T '33.99' 'development.unspecified' 'niben101scf03167_281205-285605' '(at2g45190 : 204.0) Encodes a member of the YABBY family of transcriptional regulators that is involved in abaxial cell type specification in leaves and fruits. YAB1 acts in a non-cell autonomous fashion within the meristem to affect phyllotactic patterning. The non-autonomous effect on the central region of the meristem is mediated through the activity if Lateral Suppressor (LAS).; ABNORMAL FLORAL ORGANS (AFO); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT4G00180.1); Has 454 Blast hits to 452 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 436; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|68268 : 195.0) no description available & (q7xim7|yab1_orysa : 130.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 408.0) & (original description: Putative FIL, Description = FIL protein, PFAM = PF04690)' T '33.99' 'development.unspecified' 'niben101scf03169_407394-412072' '(at4g28500 : 345.0) NAC domain containing protein 73 (NAC073); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 10 (TAIR:AT1G28470.1); Has 2322 Blast hits to 2317 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2321; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66085 : 136.0) no description available & (reliability: 690.0) & (original description: Putative NAC010, Description = NAC domain-containing protein 10, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf03175_148569-180650' '(at1g55540 : 301.0) embryo defective 1011 (emb1011); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 602.0) & (original description: Putative Sb01g042703, Description = Putative uncharacterized protein Sb01g042703, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf03202_1307706-1345029' '(gnl|cdd|67150 : 145.0) no description available & (q5ne24|nsp2_medtr : 105.0) Nodulation signaling pathway 2 protein - Medicago truncatula (Barrel medic) & (at5g17490 : 90.5) DELLA subfamily member involved in GA signal transduction; RGA-like protein 3 (RGL3); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative GRAS5, Description = GRAS5, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf03204_193712-196939' '(at4g27410 : 367.0) Encodes a NAC transcription factor induced in response to dessication. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response.; RESPONSIVE TO DESICCATION 26 (RD26); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 19 (TAIR:AT1G52890.1); Has 2991 Blast hits to 2983 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2991; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 245.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 210.0) no description available & (reliability: 734.0) & (original description: Putative nac, Description = NAC transcription factor, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf03221_59252-67078' '(at1g48380 : 266.0) Encodes a novel nuclear protein required for root hair initiation and ploidy-dependent cell growth. Its sequence has similarity to the C-terminal domain of mammalian DNA topo IIalpha. Shows in vitro DNA binding activity and is likely to be part of the topo VI complex by binding to subunit A.; ROOT HAIRLESS 1 (RHL1); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: root hair initiation, DNA endoreduplication; LOCATED IN: nucleolus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 532.0) & (original description: Putative RHL1, Description = DNA-binding protein RHL1, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf03221_59766-67011' '(at1g48380 : 270.0) Encodes a novel nuclear protein required for root hair initiation and ploidy-dependent cell growth. Its sequence has similarity to the C-terminal domain of mammalian DNA topo IIalpha. Shows in vitro DNA binding activity and is likely to be part of the topo VI complex by binding to subunit A.; ROOT HAIRLESS 1 (RHL1); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: root hair initiation, DNA endoreduplication; LOCATED IN: nucleolus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 540.0) & (original description: Putative RHL1, Description = DNA-binding protein RHL1, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf03241_162795-172669' '(at5g14520 : 786.0) pescadillo-related; FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: cell proliferation; LOCATED IN: nucleolus, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pescadillo, N-terminal (InterPro:IPR010613), BRCT (InterPro:IPR001357); Has 503 Blast hits to 494 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 173; Fungi - 168; Plants - 48; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (gnl|cdd|37692 : 523.0) no description available & (gnl|cdd|34764 : 364.0) no description available & (reliability: 1572.0) & (original description: Putative nop7, Description = Pescadillo homolog, PFAM = PF06732;PF16589)' T '33.99' 'development.unspecified' 'niben101scf03245_786806-792931' '(at3g21060 : 730.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 5627 Blast hits to 3991 proteins in 353 species: Archae - 10; Bacteria - 1286; Metazoa - 1502; Fungi - 1496; Plants - 488; Viruses - 0; Other Eukaryotes - 845 (source: NCBI BLink). & (gnl|cdd|36487 : 324.0) no description available & (gnl|cdd|29257 : 99.7) no description available & (reliability: 1460.0) & (original description: Putative RBL, Description = Protein RBL, PFAM = PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf03254_622571-627304' '(at2g39510 : 393.0) nodulin MtN21 /EamA-like transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT2G37460.1); Has 4772 Blast hits to 4753 proteins in 819 species: Archae - 36; Bacteria - 2386; Metazoa - 4; Fungi - 0; Plants - 1228; Viruses - 0; Other Eukaryotes - 1118 (source: NCBI BLink). & (reliability: 786.0) & (original description: Putative nlp1, Description = WAT1-related protein, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf03263_869036-879288' '(at5g43920 : 696.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT5G08560.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35514 : 591.0) no description available & (gnl|cdd|29257 : 174.0) no description available & (reliability: 1392.0) & (original description: Putative WDS, Description = Transducin/WD40 domain-containing protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf03283_272350-275651' '(gnl|cdd|66085 : 84.2) no description available & (at5g04410 : 81.6) NAC family member, functions as a transcriptional activator, regulates flavonoid biosynthesis under high light.; NAC domain containing protein 2 (NAC2); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 53 (TAIR:AT3G10500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative PGSC0003DMG400008178, Description = , PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf03284_636150-640842' '(at4g21150 : 187.0) HAPLESS 6 (HAP6); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: response to cold, protein amino acid terminal N-glycosylation; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribophorin II (InterPro:IPR008814). & (gnl|cdd|86956 : 136.0) no description available & (reliability: 374.0) & (original description: Putative HAP6, Description = Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2, PFAM = PF05817)' T '33.99' 'development.unspecified' 'niben101scf03307_506018-513410' '(at4g29230 : 404.0) NAC domain containing protein 75 (NAC075); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 99 (TAIR:AT5G56620.1); Has 3052 Blast hits to 2928 proteins in 176 species: Archae - 2; Bacteria - 22; Metazoa - 475; Fungi - 52; Plants - 2293; Viruses - 3; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|66085 : 134.0) no description available & (reliability: 808.0) & (original description: Putative NAC16, Description = NAC domain protein, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf03352_371673-375924' '(at1g21460 : 239.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT5G53190.1); Has 988 Blast hits to 930 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 221; Fungi - 0; Plants - 643; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36836 : 177.0) no description available & (gnl|cdd|86234 : 83.3) no description available & (reliability: 478.0) & (original description: Putative SWEET1, Description = Bidirectional sugar transporter SWEET1, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf03360_41216-46233' '(at5g23660 : 244.0) homolog of the Medicago nodulin MTN3; homolog of Medicago truncatula MTN3 (MTN3); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT3G48740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36836 : 222.0) no description available & (gnl|cdd|86234 : 90.6) no description available & (reliability: 488.0) & (original description: Putative SWEET14, Description = Bidirectional sugar transporter SWEET14, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf03360_53491-92398' '(at3g48740 : 262.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: homolog of Medicago truncatula MTN3 (TAIR:AT5G23660.1); Has 1006 Blast hits to 953 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 236; Fungi - 0; Plants - 627; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|36836 : 229.0) no description available & (gnl|cdd|86234 : 92.5) no description available & (reliability: 524.0) & (original description: Putative SWEET10, Description = Bidirectional sugar transporter SWEET10, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf03360_88661-92401' '(at3g48740 : 262.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: homolog of Medicago truncatula MTN3 (TAIR:AT5G23660.1); Has 1006 Blast hits to 953 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 236; Fungi - 0; Plants - 627; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|36836 : 229.0) no description available & (gnl|cdd|86234 : 92.9) no description available & (reliability: 524.0) & (original description: Putative SWEET11, Description = Bidirectional sugar transporter SWEET11, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf03366_59441-66590' '(at4g28530 : 199.0) NAC domain containing protein 74 (NAC074); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT5G53950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66085 : 130.0) no description available & (q5cd17|nac77_orysa : 129.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 398.0) & (original description: Putative cuc3, Description = NAC transcription factor, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf03370_475544-479552' '(at5g07050 : 399.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT2G40900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 798.0) & (original description: Putative nlp1, Description = WAT1-related protein, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf03398_639550-643663' '(at5g06710 : 190.0) Homeobox-leucine zipper protein.; homeobox from Arabidopsis thaliana (HAT14); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT4G17460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35704 : 139.0) no description available & (gnl|cdd|47667 : 85.4) no description available & (reliability: 380.0) & (original description: Putative HAT14, Description = Homeobox-leucine zipper protein HAT14, PFAM = PF02183;PF00046)' T '33.99' 'development.unspecified' 'niben101scf03419_305702-311073' '(at4g37750 : 442.0) ANT is required for control of cell proliferation and encodes a putative transcriptional regulator similar to AP2. Loss of function alleles have reduced fertility, abnormal ovules and abnormal lateral organs. Expressed specifically in the chalaza and in floral organ primordia.; AINTEGUMENTA (ANT); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G72570.1); Has 7251 Blast hits to 5191 proteins in 264 species: Archae - 0; Bacteria - 9; Metazoa - 18; Fungi - 8; Plants - 7086; Viruses - 4; Other Eukaryotes - 126 (source: NCBI BLink). & (q8lsn2|bbm2_brana : 332.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (gnl|cdd|47695 : 96.9) no description available & (reliability: 884.0) & (original description: Putative ANT, Description = AP2-like ethylene-responsive transcription factor ANT, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'niben101scf03427_71266-76571' '(at1g28560 : 330.0) Encodes a protein similar to human SNAP50. Mutants display different temperature sensitivities in the dedifferentiation of cells from different organs. Mutation inhibits the dedifferentiation-associated accumulation of U-snRNAs and some other small RNA species encoded by independent-type genes carrying the USE and TATA box. Required for the elevation of cell proliferation competence in hypocotyl dedifferentiation.; SHOOT REDIFFERENTIATION DEFECTIVE 2 (SRD2); FUNCTIONS IN: DNA binding; INVOLVED IN: snRNA transcription, organ morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: snRNA-activating protein complex, subunit 3, C-terminal (InterPro:IPR022042); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37875 : 197.0) no description available & (reliability: 660.0) & (original description: Putative SRD2, Description = Protein SHOOT REDIFFERENTIATION DEFECTIVE 2, PFAM = PF12251)' T '33.99' 'development.unspecified' 'niben101scf03449_239905-257236' '(at5g22370 : 468.0) Encodes QQT1. Required for early embryo development. qqt1 mutant lines are embryo-defective. Participates in the organization of microtubules during cell division. Interacts with QQT2 (encoded by AT4G21800).; QUATRE-QUART 1 (QQT1); FUNCTIONS IN: nucleotide binding, ATP binding; INVOLVED IN: embryo development, cell division, embryo development ending in seed dormancy; LOCATED IN: microtubule; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function, ATP binding (InterPro:IPR004130); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G12790.5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36746 : 394.0) no description available & (gnl|cdd|86218 : 216.0) no description available & (reliability: 936.0) & (original description: Putative GPN2, Description = GPN-loop GTPase 2, PFAM = PF03029)' T '33.99' 'development.unspecified' 'niben101scf03449_239911-255444' '(at5g22370 : 290.0) Encodes QQT1. Required for early embryo development. qqt1 mutant lines are embryo-defective. Participates in the organization of microtubules during cell division. Interacts with QQT2 (encoded by AT4G21800).; QUATRE-QUART 1 (QQT1); FUNCTIONS IN: nucleotide binding, ATP binding; INVOLVED IN: embryo development, cell division, embryo development ending in seed dormancy; LOCATED IN: microtubule; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function, ATP binding (InterPro:IPR004130); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G12790.5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36746 : 249.0) no description available & (gnl|cdd|86218 : 107.0) no description available & (reliability: 580.0) & (original description: Putative gpn2, Description = ATP-binding domain 1 family member B, PFAM = PF03029)' T '33.99' 'development.unspecified' 'niben101scf03453_2302-4955' '(at4g27990 : 171.0) YLMG1-2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function YGGT (InterPro:IPR003425); BEST Arabidopsis thaliana protein match is: YGGT family protein (TAIR:AT3G07430.1); Has 788 Blast hits to 788 proteins in 294 species: Archae - 0; Bacteria - 510; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative emb1990, Description = YGGT family protein, PFAM = PF02325)' T '33.99' 'development.unspecified' 'niben101scf03473_87067-90529' '(gnl|cdd|67150 : 238.0) no description available & (q8s4w7|gai1_vitvi : 187.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (at5g48150 : 185.0) Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway.; phytochrome a signal transduction 1 (PAT1); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 21 (TAIR:AT2G04890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 370.0) & (original description: Putative glysoja_024156, Description = DELLA protein GAI, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf03486_246674-260993' '(at4g00090 : 580.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: periodic tryptophan protein 2 (TAIR:AT1G15440.2); Has 19942 Blast hits to 11235 proteins in 520 species: Archae - 42; Bacteria - 5638; Metazoa - 5982; Fungi - 4099; Plants - 1742; Viruses - 0; Other Eukaryotes - 2439 (source: NCBI BLink). & (gnl|cdd|37307 : 432.0) no description available & (gnl|cdd|29257 : 108.0) no description available & (reliability: 1160.0) & (original description: Putative SS1, Description = Transducin beta-like protein 2, PFAM = PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf03488_1200493-1216784' '(at5g65060 : 134.0) MADS domain protein - flowering regulator that is closely related to FLC; MADS AFFECTING FLOWERING 3 (MAF3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: negative regulation of flower development, regulation of transcription, DNA-dependent, vernalization response; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 31 (TAIR:AT5G65050.3); Has 6499 Blast hits to 6487 proteins in 808 species: Archae - 0; Bacteria - 0; Metazoa - 619; Fungi - 301; Plants - 5512; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (q7xun2|mad17_orysa : 133.0) MADS-box transcription factor 17 (OsMADS17) (NMADS3) (RMADS213) - Oryza sativa (Rice) & (gnl|cdd|29020 : 110.0) no description available & (gnl|cdd|35238 : 88.9) no description available & (reliability: 246.0) & (original description: Putative AGL31, Description = Agamous-like MADS-box protein AGL31, PFAM = PF01486;PF00319)' T '33.99' 'development.unspecified' 'niben101scf03514_61786-65787' '(gnl|cdd|69737 : 175.0) no description available & (at2g41475 : 166.0) Embryo-specific protein 3, (ATS3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Embryo-specific 3 (InterPro:IPR010417); BEST Arabidopsis thaliana protein match is: Embryo-specific protein 3, (ATS3) (TAIR:AT5G62200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative CAPIP2, Description = CAPIP2, PFAM = PF06232)' T '33.99' 'development.unspecified' 'niben101scf03528_299487-303434' '(at2g02450 : 274.0) NAC domain containing protein 35 (NAC035); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 94 (TAIR:AT5G39820.1); Has 5401 Blast hits to 4721 proteins in 140 species: Archae - 0; Bacteria - 7; Metazoa - 144; Fungi - 68; Plants - 2924; Viruses - 5; Other Eukaryotes - 2253 (source: NCBI BLink). & (gnl|cdd|66085 : 205.0) no description available & (q7f2l3|nac48_orysa : 167.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (reliability: 548.0) & (original description: Putative FEZ, Description = Protein FEZ, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf03541_2332-16303' '(at4g17230 : 609.0) Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family.; SCARECROW-like 13 (SCL13); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: scarecrow-like 5 (TAIR:AT1G50600.1); Has 2512 Blast hits to 2467 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 522.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 339.0) no description available & (reliability: 1218.0) & (original description: Putative SCL13, Description = Scarecrow-like protein 13, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf03548_216550-231095' '(at5g61910 : 806.0) DCD (Development and Cell Death) domain protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 membrane targeting protein (InterPro:IPR018029), Kelch related (InterPro:IPR013089), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Calcium-dependent phospholipid-binding Copine family protein (TAIR:AT5G61900.3). & (gnl|cdd|36541 : 513.0) no description available & (gnl|cdd|29232 : 318.0) no description available & (reliability: 1592.0) & (original description: Putative BON2, Description = Protein BONZAI 2, PFAM = PF00168;PF00168;PF07002)' T '33.99' 'development.unspecified' 'niben101scf03550_81993-86424' '(at3g18200 : 436.0) nodulin MtN21 /EamA-like transporter family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: Walls Are Thin 1 (TAIR:AT1G75500.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 872.0) & (original description: Putative WAT1, Description = Protein WALLS ARE THIN 1, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf03584_222833-227205' '(at3g56640 : 1085.0) Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.; exocyst complex component sec15A (SEC15A); CONTAINS InterPro DOMAIN/s: Exocyst complex subunit Sec15-like (InterPro:IPR007225); BEST Arabidopsis thaliana protein match is: exocyst complex component sec15B (TAIR:AT4G02350.1); Has 442 Blast hits to 436 proteins in 182 species: Archae - 3; Bacteria - 0; Metazoa - 174; Fungi - 134; Plants - 89; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|37387 : 726.0) no description available & (gnl|cdd|67697 : 114.0) no description available & (reliability: 2170.0) & (original description: Putative SEC15A, Description = Exocyst complex component SEC15A, PFAM = PF04091)' T '33.99' 'development.unspecified' 'niben101scf03595_942133-957877' '(at5g08290 : 287.0) Encodes Dim1 homolog.; YELLOW-LEAF-SPECIFIC GENE 8 (YLS8); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), mRNA splicing factor, thioredoxin-like U5 snRNP (InterPro:IPR004123), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: mRNA splicing factor, thioredoxin-like U5 snRNP (TAIR:AT3G24730.1); Has 564 Blast hits to 564 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 221; Fungi - 146; Plants - 112; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|38624 : 244.0) no description available & (gnl|cdd|66627 : 231.0) no description available & (reliability: 574.0) & (original description: Putative YLS8, Description = Thioredoxin-like protein YLS8, PFAM = PF02966)' T '33.99' 'development.unspecified' 'niben101scf03599_12501-26067' '(at4g00060 : 1043.0) maternal effect embryo arrest 44 (MEE44); FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), PAP/25A-associated (InterPro:IPR002058); BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT5G53770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37117 : 100.0) no description available & (gnl|cdd|34857 : 91.6) no description available & (reliability: 2086.0) & (original description: Putative Sb10g026810, Description = Putative uncharacterized protein Sb10g026810, PFAM = PF03828;PF01909)' T '33.99' 'development.unspecified' 'niben101scf03599_236996-241266' '(at4g00150 : 387.0) HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 259.0) no description available & (q8s4w7|gai1_vitvi : 122.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 774.0) & (original description: Putative LOM, Description = LOM-like transcription factor, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf03600_278653-286574' '(at5g14250 : 523.0) Encodes subunit 3 of the COP9 signalosome.; CONSTITUTIVE PHOTOMORPHOGENIC 13 (COP13); CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); Has 402 Blast hits to 401 proteins in 151 species: Archae - 0; Bacteria - 0; Metazoa - 218; Fungi - 81; Plants - 54; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|37793 : 386.0) no description available & (reliability: 1046.0) & (original description: Putative CSN3, Description = COP9 signalosome complex subunit 3, PFAM = PF01399)' T '33.99' 'development.unspecified' 'niben101scf03638_29024-50807' '(at1g15750 : 1505.0) Encodes a protein with several WD40 repeats at the C-terminus and predicted protein-protein interaction domains at the N-terminus. Together with the TOPLESS-RELATED PROTEINS (TPRs), it is thought to be involved in transcriptional repression of root-promoting genes in the top help of the embryo during the transition stage of embryogenesis. The ability of IAA12 to repress transcription is diminished in a tpl-1 mutant background.; TOPLESS (TPL); FUNCTIONS IN: protein binding, transcription repressor activity, protein homodimerization activity; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, primary shoot apical meristem specification, jasmonic acid mediated signaling pathway; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TOPLESS-related 1 (TAIR:AT1G80490.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35487 : 120.0) no description available & (gnl|cdd|29257 : 113.0) no description available & (reliability: 3010.0) & (original description: Putative TPR2, Description = Protein TPR2, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf03645_108197-133499' '(at4g21150 : 713.0) HAPLESS 6 (HAP6); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: response to cold, protein amino acid terminal N-glycosylation; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribophorin II (InterPro:IPR008814). & (gnl|cdd|86956 : 649.0) no description available & (gnl|cdd|37658 : 237.0) no description available & (reliability: 1426.0) & (original description: Putative RPN2, Description = Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2, PFAM = PF05817)' T '33.99' 'development.unspecified' 'niben101scf03645_204389-210612' '(at5g19610 : 1748.0) GNOM-like 2 (GNL2); FUNCTIONS IN: ARF guanyl-nucleotide exchange factor activity; INVOLVED IN: pollen germination; LOCATED IN: intracellular; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904); BEST Arabidopsis thaliana protein match is: sec7 domain-containing protein (TAIR:AT1G13980.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36146 : 1137.0) no description available & (gnl|cdd|29116 : 222.0) no description available & (reliability: 3496.0) & (original description: Putative GNL2, Description = ARF guanine-nucleotide exchange factor GNL2, PFAM = PF12783;PF01369)' T '33.99' 'development.unspecified' 'niben101scf03676_402298-408471' '(at2g45690 : 382.0) Encodes a protein with similarity to yeast Pep16p, a membrane localized protein involved in peroxisome assembly and protein-trafficking. SSE1 mutant seeds do not accumulate oils and dessicated seeds have a shrunken appearance. Involved in protein and oil body biogenesis. SSE is expressed during seed development, reaching the highest peak in mature siliques. Expression in leaves and roots is low compared to cotyledons and flowers. Located in peroxisomes and endoplasmic reticulum. Homologous to the peroxin PEX16 and complements the pex16 mutants of the yeast Yarrowia lipolytica.; SHRUNKEN SEED 1 (SSE1); CONTAINS InterPro DOMAIN/s: Peroxisome membrane protein, Pex16 (InterPro:IPR013919); Has 261 Blast hits to 259 proteins in 120 species: Archae - 0; Bacteria - 0; Metazoa - 102; Fungi - 93; Plants - 47; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|39746 : 256.0) no description available & (gnl|cdd|72035 : 247.0) no description available & (reliability: 764.0) & (original description: Putative PEX16, Description = Peroxisome biogenesis protein 16, PFAM = PF08610)' T '33.99' 'development.unspecified' 'niben101scf03693_111690-115501' '(at5g66770 : 568.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G50650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67150 : 277.0) no description available & (q8gve1|cigr2_orysa : 193.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (reliability: 1136.0) & (original description: Putative SCL4, Description = Scarecrow-like protein 4, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf03693_373170-380780' '(at3g50670 : 254.0) Encodes U1 snRNP 70K; U1 small nuclear ribonucleoprotein-70K (U1-70K); FUNCTIONS IN: RNA binding, nucleotide binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U1 small nuclear ribonucleoprotein of 70kDa MW N-terminal (InterPro:IPR022023), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G43370.1); Has 501 Blast hits to 501 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 126; Plants - 97; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|35336 : 215.0) no description available & (reliability: 508.0) & (original description: Putative RNU1, Description = U1 small nuclear ribonucleoprotein 70 kDa, PFAM = PF00076;PF12220)' T '33.99' 'development.unspecified' 'niben101scf03695_197287-200847' '(at3g10490 : 84.0) NAC domain containing protein 52 (NAC052); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, pollen development; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 50 (TAIR:AT3G10480.1); Has 3394 Blast hits to 3360 proteins in 132 species: Archae - 4; Bacteria - 13; Metazoa - 65; Fungi - 17; Plants - 3017; Viruses - 4; Other Eukaryotes - 274 (source: NCBI BLink). & (q52qh4|nac68_orysa : 82.8) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 168.0) & (original description: Putative PGSC0003DMG400007065, Description = , PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf03733_99603-107605' '(at5g56280 : 494.0) one of two genes encoding subunit 6 of COP9 signalosome complex. Protein contains a MPR1p and PAD1p N-terminal (MPN) domain at the N-terminal region and belongs to the Mov34 superfamily. Mutant and antisense expression result in a number of developmental defects and in ubiquitin/proteasome-mediated protein degradation.; COP9 signalosome subunit 6A (CSN6A); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: COP9 signalosome subunit 6B (TAIR:AT4G26430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38260 : 389.0) no description available & (reliability: 988.0) & (original description: Putative CSN6A, Description = COP9 signalosome complex subunit 6a, PFAM = PF13012;PF01398)' T '33.99' 'development.unspecified' 'niben101scf03733_336300-374547' '(at1g55680 : 181.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G13340.2); Has 20114 Blast hits to 9589 proteins in 506 species: Archae - 80; Bacteria - 6727; Metazoa - 4776; Fungi - 4188; Plants - 1687; Viruses - 0; Other Eukaryotes - 2656 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative gbp3, Description = Putative WD repeat-containing protein C2A9.03, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf03735_130294-152999' '(at5g66240 : 540.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G14530.1). & (gnl|cdd|36659 : 361.0) no description available & (gnl|cdd|29257 : 132.0) no description available & (reliability: 1080.0) & (original description: Putative WDR82, Description = WD repeat-containing protein 82, PFAM = PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf03735_751561-755735' '(at2g18060 : 426.0) Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.; vascular related NAC-domain protein 1 (VND1); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 76 (TAIR:AT4G36160.1); Has 3025 Blast hits to 3020 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3025; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q5z6b6|nac76_orysa : 249.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (gnl|cdd|66085 : 217.0) no description available & (reliability: 852.0) & (original description: Putative NAC037, Description = NAC domain-containing protein 37, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf03736_8269-13681' '(at4g30840 : 402.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 804.0) & (original description: Putative NUP43, Description = Nuclear pore complex protein NUP43, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf03756_159068-170508' '(q42429|agl8_soltu : 338.0) Agamous-like MADS-box protein AGL8 homolog (POTM1-1) - Solanum tuberosum (Potato) & (at5g60910 : 254.0) MADS box gene negatively regulated by APETALA1; AGAMOUS-like 8 (AGL8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of flower development, maintenance of inflorescence meristem identity, fruit development; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G69120.1); Has 3783 Blast hits to 3782 proteins in 618 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 10; Plants - 3766; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|29020 : 124.0) no description available & (gnl|cdd|35238 : 95.1) no description available & (reliability: 508.0) & (original description: Putative m4, Description = FRUITFULL-like protein, PFAM = PF01486;PF00319)' T '33.99' 'development.unspecified' 'niben101scf03814_56183-63537' '(at5g43810 : 1351.0) Encodes a member of the EIF2C (elongation initiation factor 2c)/ Argonaute class of proteins. Required to establish the central-peripheral organization of the embryo apex. Along with WUS and CLV genes, controls the relative organization of central zone and peripheral zone cells in meristems. Acts in embryonic provascular tissue potentiating WUSCHEL function during meristem development in the embryo.; ZWILLE (ZLL); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT1G48410.1). & (gnl|cdd|36259 : 794.0) no description available & (gnl|cdd|72942 : 563.0) no description available & (reliability: 2478.0) & (original description: Putative PHN1, Description = Protein argonaute PNH1, PFAM = PF16486;PF16487;PF08699;PF16488;PF02171;PF02170)' T '33.99' 'development.unspecified' 'niben101scf03822_112597-115640' '(at2g17230 : 449.0) EXORDIUM like 5 (EXL5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: EXORDIUM like 1 (TAIR:AT2G35150.1); Has 402 Blast hits to 401 proteins in 25 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 398; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68252 : 361.0) no description available & (reliability: 898.0) & (original description: Putative EXL5, Description = Protein EXORDIUM-like 5, PFAM = PF04674)' T '33.99' 'development.unspecified' 'niben101scf03822_122767-133057' '(at2g17250 : 679.0) EMBRYO DEFECTIVE 2762 (EMB2762); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding factor (InterPro:IPR005612); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37365 : 287.0) no description available & (gnl|cdd|67525 : 146.0) no description available & (reliability: 1358.0) & (original description: Putative EMB2762, Description = CCAAT-binding factor, PFAM = PF03914)' T '33.99' 'development.unspecified' 'niben101scf03867_37887-40903' '(at2g35150 : 370.0) EXORDIUM like 1 (EXL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: EXORDIUM like 5 (TAIR:AT2G17230.1); Has 396 Blast hits to 396 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 394; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68252 : 304.0) no description available & (reliability: 718.0) & (original description: Putative EXL7, Description = Protein EXORDIUM-like 7, PFAM = PF04674)' T '33.99' 'development.unspecified' 'niben101scf03873_2261-6668' '(at5g45275 : 482.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G19450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70288 : 232.0) no description available & (reliability: 938.0) & (original description: Putative NFD4, Description = Protein NUCLEAR FUSION DEFECTIVE 4, PFAM = PF06813)' T '33.99' 'development.unspecified' 'niben101scf03915_267358-277376' '(at5g64530 : 120.0) xylem NAC domain 1 (XND1); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 25 (TAIR:AT1G61110.1); Has 2741 Blast hits to 2738 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2741; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 104.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 98.4) no description available & (reliability: 240.0) & (original description: Putative NAC2, Description = NAC transcription factor protein 2, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf03930_251815-254718' '(gnl|cdd|69737 : 163.0) no description available & (at5g62200 : 162.0) Embryo-specific protein 3, (ATS3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Embryo-specific 3 (InterPro:IPR010417); BEST Arabidopsis thaliana protein match is: Embryo-specific protein 3, (ATS3) (TAIR:AT2G41475.1); Has 109 Blast hits to 109 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative CAPIP2, Description = CAPIP2, PFAM = PF06232)' T '33.99' 'development.unspecified' 'niben101scf03934_170596-179521' '(at2g20330 : 833.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 32306 Blast hits to 19564 proteins in 654 species: Archae - 48; Bacteria - 6195; Metazoa - 11628; Fungi - 6530; Plants - 3814; Viruses - 23; Other Eukaryotes - 4068 (source: NCBI BLink). & (gnl|cdd|35991 : 687.0) no description available & (gnl|cdd|29257 : 147.0) no description available & (reliability: 1666.0) & (original description: Putative WDR70, Description = WD repeat-containing protein 70, PFAM = PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf03941_179997-188591' '(at3g44290 : 209.0) NAC domain containing protein 60 (NAC060); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 89 (TAIR:AT5G22290.1); Has 2819 Blast hits to 2813 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2819; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 152.0) no description available & (q7gcl7|nac74_orysa : 140.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 418.0) & (original description: Putative NAC2, Description = NAC domain protein, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf03949_186430-197306' '(at4g10350 : 349.0) NAC domain protein. SMB, BRN1, and BRN2 act to regulate root cap maturation, in a partially redundant fashion.BRN1 and BRN2, control the cell wall maturation processes that are required to detach root cap layers from the root.; NAC domain containing protein 70 (NAC070); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 15 (TAIR:AT1G33280.1); Has 2970 Blast hits to 2965 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2970; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q5z6b6|nac76_orysa : 244.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (gnl|cdd|66085 : 213.0) no description available & (reliability: 698.0) & (original description: Putative BRN2, Description = Protein BEARSKIN2, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf03949_739736-769901' '(at1g71270 : 1108.0) Encodes a homolog of the yeast Vps52p/SAC2. Involved in pollen tube germination and growth. Located in multiple endomembrane organelles including the golgi. The yeast protein has been shown to be located at the late Golgi and to function in a complex involved in retrograde trafficking of vesicles between the early endosomal compartment and the trans-Golgi network.; POKY POLLEN TUBE (POK); CONTAINS InterPro DOMAIN/s: Vps52/Sac2 (InterPro:IPR007258); BEST Arabidopsis thaliana protein match is: Vps52 / Sac2 family (TAIR:AT1G71300.1); Has 820 Blast hits to 773 proteins in 240 species: Archae - 10; Bacteria - 70; Metazoa - 261; Fungi - 156; Plants - 82; Viruses - 2; Other Eukaryotes - 239 (source: NCBI BLink). & (gnl|cdd|37172 : 794.0) no description available & (gnl|cdd|67733 : 573.0) no description available & (reliability: 2216.0) & (original description: Putative VPS52, Description = Vacuolar protein sorting-associated protein 52 A, PFAM = PF04129)' T '33.99' 'development.unspecified' 'niben101scf03953_331909-336572' '(at1g47530 : 441.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, ripening, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: root hair specific 2 (TAIR:AT1G12950.1); Has 9964 Blast hits to 9893 proteins in 2013 species: Archae - 182; Bacteria - 7111; Metazoa - 140; Fungi - 326; Plants - 1355; Viruses - 0; Other Eukaryotes - 850 (source: NCBI BLink). & (gnl|cdd|36561 : 419.0) no description available & (gnl|cdd|30880 : 189.0) no description available & (reliability: 882.0) & (original description: Putative Sb03g035610, Description = Protein DETOXIFICATION, PFAM = PF01554;PF01554)' T '33.99' 'development.unspecified' 'niben101scf03959_100365-107649' '(at3g05000 : 296.0) Transport protein particle (TRAPP) component; CONTAINS InterPro DOMAIN/s: Transport protein particle (TRAPP) component (InterPro:IPR007194); Has 457 Blast hits to 457 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 198; Fungi - 137; Plants - 66; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|38526 : 207.0) no description available & (gnl|cdd|86520 : 149.0) no description available & (reliability: 592.0) & (original description: Putative TRAPPC6B, Description = Trafficking protein particle complex subunit 6B, PFAM = PF04051)' T '33.99' 'development.unspecified' 'niben101scf03964_70666-76407' '(at4g30420 : 336.0) nodulin MtN21 /EamA-like transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT4G28040.5); Has 3568 Blast hits to 3558 proteins in 670 species: Archae - 22; Bacteria - 1633; Metazoa - 4; Fungi - 0; Plants - 1218; Viruses - 0; Other Eukaryotes - 691 (source: NCBI BLink). & (reliability: 672.0) & (original description: Putative At4g30420, Description = WAT1-related protein At4g30420, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf03973_196407-211387' '(at5g22790 : 476.0) reticulata-related 1 (RER1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3411) (TAIR:AT2G37860.3); Has 4329 Blast hits to 1807 proteins in 262 species: Archae - 14; Bacteria - 665; Metazoa - 1748; Fungi - 324; Plants - 608; Viruses - 168; Other Eukaryotes - 802 (source: NCBI BLink). & (reliability: 908.0) & (original description: Putative Sb02g007060, Description = Putative uncharacterized protein Sb02g007060, PFAM = PF11891)' T '33.99' 'development.unspecified' 'niben101scf03985_263398-269880' '(at5g41790 : 164.0) encodes a protein that physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. expression is not regulated by light.; COP1-interactive protein 1 (CIP1); FUNCTIONS IN: protein binding; INVOLVED IN: regulation of protein import into nucleus; LOCATED IN: cytoskeleton, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G64330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35383 : 156.0) no description available & (gnl|cdd|31389 : 90.1) no description available & (reliability: 328.0) & (original description: Putative PGSC0003DMG400012303, Description = Putative myosin-4-like, PFAM = PF07765)' T '33.99' 'development.unspecified' 'niben101scf03987_57287-62418' '(gnl|cdd|66085 : 94.2) no description available & (at1g69490 : 92.8) Encodes a member of the NAC transcription factor gene family. It is expressed in floral primordia and upregulated by AP3 and PI. Its expression is associated with leaf senescence.; NAC-like, activated by AP3/PI (NAP); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 25 (TAIR:AT1G61110.1); Has 3046 Blast hits to 3040 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3046; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 185.6) & (original description: Putative , Description = , PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf04010_152292-170467' '(at5g56280 : 470.0) one of two genes encoding subunit 6 of COP9 signalosome complex. Protein contains a MPR1p and PAD1p N-terminal (MPN) domain at the N-terminal region and belongs to the Mov34 superfamily. Mutant and antisense expression result in a number of developmental defects and in ubiquitin/proteasome-mediated protein degradation.; COP9 signalosome subunit 6A (CSN6A); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: COP9 signalosome subunit 6B (TAIR:AT4G26430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38260 : 392.0) no description available & (reliability: 940.0) & (original description: Putative CSN6A, Description = COP9 signalosome complex subunit 6a, PFAM = PF01398;PF13012)' T '33.99' 'development.unspecified' 'niben101scf04011_756087-772916' '(at4g00800 : 1631.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type (InterPro:IPR001841), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024); Has 298 Blast hits to 228 proteins in 78 species: Archae - 0; Bacteria - 17; Metazoa - 93; Fungi - 89; Plants - 34; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|37290 : 226.0) no description available & (reliability: 3262.0) & (original description: Putative At4g00800, Description = Transducin family protein / WD-40 repeat family protein, PFAM = PF00637;PF12816;PF12894)' T '33.99' 'development.unspecified' 'niben101scf04044_2307347-2310592' '(at5g11460 : 143.0) Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT2G25690.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative , Description = , PFAM = PF04570)' T '33.99' 'development.unspecified' 'niben101scf04046_145752-152204' '(at1g79760 : 171.0) Identified as target of the AGL15 binding motif CArG.; downstream target of AGL15-4 (DTA4); Has 56 Blast hits to 56 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative glysoja_036877, Description = S-norcoclaurine synthase 1, PFAM = PF03171;PF14226)' T '33.99' 'development.unspecified' 'niben101scf04093_27300-41196' '(at3g55770 : 272.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1). & (p29675|sf3_helan : 177.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 167.0) no description available & (reliability: 528.0) & (original description: Putative WLIM2B, Description = LIM domain-containing protein WLIM2b, PFAM = PF00412;PF00412)' T '33.99' 'development.unspecified' 'niben101scf04099_829815-836572' '(at3g49530 : 263.0) Transcription factor that serves as a molecular link between cold signals and pathogen resistance responses. Undergoes proteolytic processing triggered by cold-induced changes in membrane fluidity.; NAC domain containing protein 62 (NAC062); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: TCV-interacting protein (TAIR:AT5G24590.2); Has 2933 Blast hits to 2926 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2931; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 202.0) no description available & (q5z6b6|nac76_orysa : 157.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (reliability: 526.0) & (original description: Putative NAC091, Description = NAC domain-containing protein 91, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf04103_444388-459499' '(at3g15610 : 480.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G52730.1); Has 43706 Blast hits to 23089 proteins in 800 species: Archae - 76; Bacteria - 7357; Metazoa - 15603; Fungi - 10314; Plants - 4879; Viruses - 0; Other Eukaryotes - 5477 (source: NCBI BLink). & (gnl|cdd|35499 : 450.0) no description available & (gnl|cdd|29257 : 145.0) no description available & (reliability: 950.0) & (original description: Putative strap, Description = Serine-threonine kinase receptor-associated protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf04109_217718-221608' '(at3g30340 : 275.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT4G01440.1); Has 4418 Blast hits to 4395 proteins in 666 species: Archae - 30; Bacteria - 2090; Metazoa - 4; Fungi - 0; Plants - 1238; Viruses - 0; Other Eukaryotes - 1056 (source: NCBI BLink). & (reliability: 550.0) & (original description: Putative At3g30340, Description = WAT1-related protein At3g30340, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf04122_313654-317500' '(gnl|cdd|38556 : 134.0) no description available & (gnl|cdd|29585 : 113.0) no description available & (at1g18100 : 112.0) Encodes a member of the FT and TFL1 family of phosphatidylethanolamine-binding proteins. It is expressed in seeds and up-regulated in response to ABA. Loss of function mutants show decreased rate of germination in the presence of ABA. ABA dependent regulation is mediated by both ABI3 and ABI5. ABI5 promotes MFT expression, primarily in the radicle-hypocotyl transition zone and ABI3 suppresses it in the seed.; E12A11; CONTAINS InterPro DOMAIN/s: Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); BEST Arabidopsis thaliana protein match is: PEBP (phosphatidylethanolamine-binding protein) family protein (TAIR:AT5G03840.1); Has 2417 Blast hits to 2417 proteins in 371 species: Archae - 0; Bacteria - 118; Metazoa - 639; Fungi - 192; Plants - 1429; Viruses - 3; Other Eukaryotes - 36 (source: NCBI BLink). & (q9xh44|cet1_tobac : 95.5) CEN-like protein 1 - Nicotiana tabacum (Common tobacco) & (reliability: 224.0) & (original description: Putative ATC, Description = Flowering locus T, PFAM = PF01161)' T '33.99' 'development.unspecified' 'niben101scf04133_200419-203740' '(at5g61430 : 327.0) NAC domain containing protein 100 (NAC100); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 80 (TAIR:AT5G07680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66085 : 209.0) no description available & (q5cd17|nac77_orysa : 204.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 654.0) & (original description: Putative nac1, Description = NAC domain-containing protein 1, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf04140_67583-72487' '(at1g68170 : 232.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: embryo, leaf whorl, seed; EXPRESSED DURING: C globular stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G25270.1); Has 2511 Blast hits to 2498 proteins in 458 species: Archae - 10; Bacteria - 1084; Metazoa - 4; Fungi - 0; Plants - 1225; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). & (reliability: 464.0) & (original description: Putative nlp1, Description = WAT1-related protein, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf04140_234740-237108' '(at1g21140 : 219.0) Vacuolar iron transporter (VIT) family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217); BEST Arabidopsis thaliana protein match is: Vacuolar iron transporter (VIT) family protein (TAIR:AT3G43660.1); Has 1867 Blast hits to 1856 proteins in 645 species: Archae - 60; Bacteria - 1279; Metazoa - 0; Fungi - 103; Plants - 211; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|39674 : 201.0) no description available & (p16313|no21_soybn : 158.0) Nodulin 21 (N-21) - Glycine max (Soybean) & (gnl|cdd|29967 : 147.0) no description available & (reliability: 438.0) & (original description: Putative SEN1, Description = Nodulin-21, PFAM = PF01988;PF01988)' T '33.99' 'development.unspecified' 'niben101scf04173_339949-343295' '(at4g28500 : 319.0) NAC domain containing protein 73 (NAC073); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 10 (TAIR:AT1G28470.1); Has 2322 Blast hits to 2317 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2321; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66085 : 130.0) no description available & (reliability: 638.0) & (original description: Putative NAC1, Description = NAC transcription factor, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf04184_727848-733984' '(at3g45600 : 412.0) Member of TETRASPANIN family; tetraspanin3 (TET3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: tetraspanin4 (TAIR:AT5G60220.1); Has 665 Blast hits to 663 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 224; Fungi - 0; Plants - 435; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|84702 : 105.0) no description available & (reliability: 824.0) & (original description: Putative TET3, Description = Tetraspanin-3, PFAM = PF00335)' T '33.99' 'development.unspecified' 'niben101scf04185_9108-12610' '(q5ne24|nsp2_medtr : 214.0) Nodulation signaling pathway 2 protein - Medicago truncatula (Barrel medic) & (gnl|cdd|67150 : 206.0) no description available & (at4g08250 : 160.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2377 Blast hits to 2344 proteins in 299 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2375; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative glysoja_021752, Description = Nodulation-signaling pathway 2 protein, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf04206_26829-34611' '(at5g48850 : 355.0) homologous to the wheat sulphate deficiency-induced gene sdi1. Expression in root and leaf is induced by sulfur starvation. Knockout mutants retained higher root and leaf sulfate concentrations, indicating a role in regulation of stored sulfate pools.; SULPHUR DEFICIENCY-INDUCED 1 (ATSDI1); FUNCTIONS IN: binding; INVOLVED IN: cellular response to sulfur starvation, regulation of sulfur utilization; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G04770.1); Has 255 Blast hits to 246 proteins in 34 species: Archae - 2; Bacteria - 37; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 710.0) & (original description: Putative SDI1, Description = Protein SULFUR DEFICIENCY-INDUCED 1, PFAM = PF13181)' T '33.99' 'development.unspecified' 'niben101scf04209_251057-255754' '(at5g41790 : 118.0) encodes a protein that physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. expression is not regulated by light.; COP1-interactive protein 1 (CIP1); FUNCTIONS IN: protein binding; INVOLVED IN: regulation of protein import into nucleus; LOCATED IN: cytoskeleton, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G64330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35383 : 91.8) no description available & (reliability: 236.0) & (original description: Putative PGSC0003DMG400004988, Description = Putative intracellular protein transport protein USO1-like, PFAM = PF07765)' T '33.99' 'development.unspecified' 'niben101scf04216_597993-602859' '(at1g71930 : 316.0) Encodes a NAC-domain transcription factor with transcriptional activation activity that is involved in xylem formation. Induces transdifferentiation of various cells into protoxylem vessel elements. Located in the nucleus. Expression induced in the presence of auxin, cytokinin and brassinosteroids.; vascular related NAC-domain protein 7 (VND7); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: vascular related NAC-domain protein 1 (TAIR:AT2G18060.1); Has 3020 Blast hits to 3015 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 3006; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (q5z6b6|nac76_orysa : 223.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (gnl|cdd|66085 : 202.0) no description available & (reliability: 632.0) & (original description: Putative NAC030, Description = NAC domain-containing protein 30, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf04218_58211-65245' '(at1g79700 : 286.0) Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ARIA-interacting double AP2 domain protein (TAIR:AT1G16060.1); Has 7501 Blast hits to 5104 proteins in 263 species: Archae - 0; Bacteria - 38; Metazoa - 0; Fungi - 0; Plants - 7383; Viruses - 2; Other Eukaryotes - 78 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 236.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 83.4) no description available & (reliability: 546.0) & (original description: Putative At1g16060, Description = AP2-like ethylene-responsive transcription factor At1g16060, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'niben101scf04218_58262-65164' '(at1g79700 : 284.0) Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ARIA-interacting double AP2 domain protein (TAIR:AT1G16060.1); Has 7501 Blast hits to 5104 proteins in 263 species: Archae - 0; Bacteria - 38; Metazoa - 0; Fungi - 0; Plants - 7383; Viruses - 2; Other Eukaryotes - 78 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 235.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (reliability: 534.0) & (original description: Putative ADAP, Description = AP2-like ethylene-responsive transcription factor, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'niben101scf04223_29791-35006' '(at4g34950 : 662.0) Major facilitator superfamily protein; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G16660.1); Has 3379 Blast hits to 3250 proteins in 882 species: Archae - 26; Bacteria - 1593; Metazoa - 4; Fungi - 302; Plants - 604; Viruses - 0; Other Eukaryotes - 850 (source: NCBI BLink). & (gnl|cdd|70288 : 267.0) no description available & (reliability: 1324.0) & (original description: Putative BnaC01g03540D, Description = BnaC01g03540D protein, PFAM = PF06813)' T '33.99' 'development.unspecified' 'niben101scf04253_413384-419077' '(at5g65700 : 1414.0) Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM2,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM1 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs.; BARELY ANY MERISTEM 1 (BAM1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT3G49670.1). & (p93194|rpk1_iponi : 464.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 279.0) no description available & (gnl|cdd|87344 : 149.0) no description available & (reliability: 2684.0) & (original description: Putative BAM1, Description = Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1, PFAM = PF13516;PF12799;PF08263;PF07714;PF13855)' T '33.99' 'development.unspecified' 'niben101scf04271_175203-178635' '(at3g48740 : 249.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: homolog of Medicago truncatula MTN3 (TAIR:AT5G23660.1); Has 1006 Blast hits to 953 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 236; Fungi - 0; Plants - 627; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|36836 : 224.0) no description available & (gnl|cdd|86234 : 95.2) no description available & (reliability: 498.0) & (original description: Putative NEC1, Description = Bidirectional sugar transporter NEC1, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf04292_1304515-1312700' '(at4g26370 : 298.0) antitermination NusB domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29565 : 96.1) no description available & (reliability: 596.0) & (original description: Putative TCM_038626, Description = Antitermination NusB domain-containing protein isoform 2, PFAM = PF01029)' T '33.99' 'development.unspecified' 'niben101scf04316_569919-573274' '(at1g17140 : 148.0) Encodes a ROP/RAC effector, designated interactor of constitutive active ROPs 1 (ICR1), that interacts with GTP-bound ROPs. ICR1 is a scaffold mediating formation of protein complexes that are required for cell polarity. ICR1 is comprised of coiled-coil domains and forms complexes with itself and the exocyst vesicle-tethering complex subunit SEC3.; interactor of constitutive active rops 1 (ICR1); BEST Arabidopsis thaliana protein match is: ROP interactive partner 2 (TAIR:AT1G78430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative ICR1, Description = Interactor of constitutive active ROPs 1, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf04323_106889-111591' '(at2g43000 : 230.0) NAC domain containing protein 42 (NAC042); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT3G12910.1); Has 2932 Blast hits to 2927 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2932; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 177.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 169.0) no description available & (reliability: 460.0) & (original description: Putative JUB1, Description = Transcription factor JUNGBRUNNEN 1, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf04323_379672-384051' '(at3g61790 : 467.0) Protein with RING/U-box and TRAF-like domains; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: multicellular organismal development, ubiquitin-dependent protein catabolic process, protein ubiquitination; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Seven-in-absentia protein, TRAF-like domain (InterPro:IPR018121), Zinc finger, SIAH-type (InterPro:IPR013010), Zinc finger, RING-type (InterPro:IPR001841), Seven In Absentia Homolog-type (InterPro:IPR013323), Seven-in-absentia protein, sina (InterPro:IPR004162), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT4G27880.1); Has 1836 Blast hits to 1817 proteins in 706 species: Archae - 0; Bacteria - 0; Metazoa - 1264; Fungi - 11; Plants - 486; Viruses - 2; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|38212 : 298.0) no description available & (gnl|cdd|86255 : 261.0) no description available & (q8t3y0|sinal_drome : 152.0) Probable E3 ubiquitin-protein ligase sina-like CG13030 (EC 6.3.2.-) - Drosophila melanogaster (Fruit fly) & (reliability: 934.0) & (original description: Putative SINA, Description = E3 ubiquitin-protein ligase, PFAM = PF03145)' T '33.99' 'development.unspecified' 'niben101scf04347_138994-144892' '(at3g61790 : 538.0) Protein with RING/U-box and TRAF-like domains; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: multicellular organismal development, ubiquitin-dependent protein catabolic process, protein ubiquitination; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Seven-in-absentia protein, TRAF-like domain (InterPro:IPR018121), Zinc finger, SIAH-type (InterPro:IPR013010), Zinc finger, RING-type (InterPro:IPR001841), Seven In Absentia Homolog-type (InterPro:IPR013323), Seven-in-absentia protein, sina (InterPro:IPR004162), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT4G27880.1); Has 1836 Blast hits to 1817 proteins in 706 species: Archae - 0; Bacteria - 0; Metazoa - 1264; Fungi - 11; Plants - 486; Viruses - 2; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|38212 : 313.0) no description available & (gnl|cdd|86255 : 280.0) no description available & (q8t3y0|sinal_drome : 145.0) Probable E3 ubiquitin-protein ligase sina-like CG13030 (EC 6.3.2.-) - Drosophila melanogaster (Fruit fly) & (reliability: 1076.0) & (original description: Putative SINAT3, Description = E3 ubiquitin-protein ligase SINAT3, PFAM = PF03145)' T '33.99' 'development.unspecified' 'niben101scf04362_221140-224945' '(at2g39210 : 769.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G28120.1); Has 3072 Blast hits to 2927 proteins in 685 species: Archae - 32; Bacteria - 1223; Metazoa - 36; Fungi - 288; Plants - 601; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink). & (gnl|cdd|70288 : 291.0) no description available & (reliability: 1538.0) & (original description: Putative At2g39210, Description = At2g39210/T16B24.15, PFAM = PF06813;PF07690)' T '33.99' 'development.unspecified' 'niben101scf04372_93150-100531' '(at4g00730 : 996.0) Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development; ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29139 : 206.0) no description available & (reliability: 1936.0) & (original description: Putative ANL2, Description = Homeobox-leucine zipper protein ANTHOCYANINLESS 2, PFAM = PF01852;PF00046)' T '33.99' 'development.unspecified' 'niben101scf04375_760820-780054' '(at5g17440 : 426.0) LUC7 related protein; CONTAINS InterPro DOMAIN/s: LUC7 related (InterPro:IPR004882); BEST Arabidopsis thaliana protein match is: LUC7 related protein (TAIR:AT3G03340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66842 : 195.0) no description available & (gnl|cdd|36015 : 192.0) no description available & (reliability: 804.0) & (original description: Putative UNE6, Description = LUC7 related protein, PFAM = PF03194;PF03194)' T '33.99' 'development.unspecified' 'niben101scf04382_131133-135364' '(at1g07530 : 600.0) Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm.; SCARECROW-like 14 (SCL14); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G29060.1); Has 2535 Blast hits to 2449 proteins in 301 species: Archae - 0; Bacteria - 12; Metazoa - 27; Fungi - 4; Plants - 2483; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|67150 : 351.0) no description available & (q69vg1|cigr1_orysa : 242.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (reliability: 1090.0) & (original description: Putative SCL14, Description = Scarecrow-like protein 14, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf04386_1-4790' '(at1g51190 : 558.0) Encodes a member of the AINTEGUMENTA-like (AIL) subclass of the AP2/EREBP family of transcription factors and is essential for quiescent center (QC) specification and stem cell activity. It is a key effector for establishment of the stem cell niche during embryonic pattern formation. It is transcribed in response to auxin accumulation and is dependent on auxin response transcription factors.; PLETHORA 2 (PLT2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G20840.1); Has 7787 Blast hits to 5250 proteins in 253 species: Archae - 0; Bacteria - 8; Metazoa - 4; Fungi - 0; Plants - 7694; Viruses - 2; Other Eukaryotes - 79 (source: NCBI BLink). & (q8lsn2|bbm2_brana : 353.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (gnl|cdd|47695 : 88.4) no description available & (reliability: 1116.0) & (original description: Putative PLT2, Description = AP2-like ethylene-responsive transcription factor PLT2, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'niben101scf04406_482132-485137' '(q9xh44|cet1_tobac : 331.0) CEN-like protein 1 - Nicotiana tabacum (Common tobacco) & (at5g03840 : 236.0) Controls inflorescence meristem identity. Involved in the floral initiation process. Ortholog of the Antirrhinum gene CENTRORADIALIS (CEN). Involved in protein trafficking to the protein storage vacuole.; TERMINAL FLOWER 1 (TFL1); CONTAINS InterPro DOMAIN/s: Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); BEST Arabidopsis thaliana protein match is: centroradialis (TAIR:AT2G27550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38556 : 202.0) no description available & (gnl|cdd|29585 : 179.0) no description available & (reliability: 472.0) & (original description: Putative CET1, Description = CEN-like protein 1, PFAM = PF01161)' T '33.99' 'development.unspecified' 'niben101scf04444_874602-892874' '(at5g55940 : 129.0) embryo defective 2731 (emb2731); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0172 (InterPro:IPR005366); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0172) (TAIR:AT5G51620.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38499 : 123.0) no description available & (gnl|cdd|67291 : 121.0) no description available & (reliability: 258.0) & (original description: Putative EMB2731, Description = Protein EMBRYO DEFECTIVE 2731, PFAM = PF03665;PF03665)' T '33.99' 'development.unspecified' 'niben101scf04455_415968-420883' '(at5g65380 : 453.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, ripening, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G44050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36561 : 371.0) no description available & (gnl|cdd|30880 : 155.0) no description available & (reliability: 906.0) & (original description: Putative DTX27, Description = Protein DETOXIFICATION 27, PFAM = PF01554;PF01554)' T '33.99' 'development.unspecified' 'niben101scf04496_95351-99070' '(at3g15510 : 313.0) Note of caution: not to be confused with another protein (AtNAC6 locus AT5G39610) which on occasion has also been referred to as AtNAC2.; NAC domain containing protein 2 (NAC2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT1G52880.1); Has 3051 Blast hits to 3043 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 3049; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 242.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 219.0) no description available & (reliability: 586.0) & (original description: Putative NAC056, Description = NAC transcription factor 56, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf04500_67677-90151' '(at5g51230 : 635.0) Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Forms a complex with FIE, CLF, and MSI1. This complex modulates the expression of target genes including AG, PI and AP3.; EMBRYONIC FLOWER 2 (EMF2); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Polycomb protein, VEFS-Box (InterPro:IPR019135); BEST Arabidopsis thaliana protein match is: VEFS-Box of polycomb protein (TAIR:AT4G16845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37561 : 228.0) no description available & (reliability: 1270.0) & (original description: Putative EMF2, Description = Polycomb group protein EMBRYONIC FLOWER 2, PFAM = PF09733)' T '33.99' 'development.unspecified' 'niben101scf04553_23275-31492' '(at2g45800 : 266.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT3G61230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p29675|sf3_helan : 176.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 172.0) no description available & (reliability: 532.0) & (original description: Putative PLIM2A, Description = LIM domain-containing protein PLIM2a, PFAM = PF00412;PF00412)' T '33.99' 'development.unspecified' 'niben101scf04563_102639-106622' '(at2g41380 : 323.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G61210.1); Has 1429 Blast hits to 1424 proteins in 497 species: Archae - 6; Bacteria - 922; Metazoa - 80; Fungi - 179; Plants - 160; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (gnl|cdd|38220 : 251.0) no description available & (reliability: 646.0) & (original description: Putative SAM, Description = S-adenosylmethionine-dependent methyltransferase, PFAM = PF08241)' T '33.99' 'development.unspecified' 'niben101scf04574_725663-733050' '(at5g10510 : 419.0) Encodes an AP2-domain transcription factor involved in root stem cell identity and root development.; AINTEGUMENTA-like 6 (AIL6); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: AINTEGUMENTA-like 7 (TAIR:AT5G65510.1). & (q8l3u3|bbm1_brana : 314.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 92.2) no description available & (reliability: 838.0) & (original description: Putative AIL6, Description = AP2-like ethylene-responsive transcription factor AIL6, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'niben101scf04624_71359-77097' '(at2g45690 : 348.0) Encodes a protein with similarity to yeast Pep16p, a membrane localized protein involved in peroxisome assembly and protein-trafficking. SSE1 mutant seeds do not accumulate oils and dessicated seeds have a shrunken appearance. Involved in protein and oil body biogenesis. SSE is expressed during seed development, reaching the highest peak in mature siliques. Expression in leaves and roots is low compared to cotyledons and flowers. Located in peroxisomes and endoplasmic reticulum. Homologous to the peroxin PEX16 and complements the pex16 mutants of the yeast Yarrowia lipolytica.; SHRUNKEN SEED 1 (SSE1); CONTAINS InterPro DOMAIN/s: Peroxisome membrane protein, Pex16 (InterPro:IPR013919); Has 261 Blast hits to 259 proteins in 120 species: Archae - 0; Bacteria - 0; Metazoa - 102; Fungi - 93; Plants - 47; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|72035 : 222.0) no description available & (gnl|cdd|39746 : 218.0) no description available & (reliability: 696.0) & (original description: Putative PEX16, Description = Peroxisome biogenesis protein 16, PFAM = PF08610)' T '33.99' 'development.unspecified' 'niben101scf04626_3384-9449' '(at3g28050 : 219.0) nodulin MtN21 /EamA-like transporter family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G40240.1); Has 1917 Blast hits to 1909 proteins in 293 species: Archae - 12; Bacteria - 576; Metazoa - 4; Fungi - 10; Plants - 1200; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative dl3810w, Description = WAT1-related protein, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf04626_32376-46564' '(at3g28050 : 320.0) nodulin MtN21 /EamA-like transporter family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G40240.1); Has 1917 Blast hits to 1909 proteins in 293 species: Archae - 12; Bacteria - 576; Metazoa - 4; Fungi - 10; Plants - 1200; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 640.0) & (original description: Putative MMG15, Description = WAT1-related protein, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf04629_370215-374300' '(at3g48740 : 241.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: homolog of Medicago truncatula MTN3 (TAIR:AT5G23660.1); Has 1006 Blast hits to 953 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 236; Fungi - 0; Plants - 627; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|36836 : 209.0) no description available & (gnl|cdd|86234 : 91.0) no description available & (reliability: 482.0) & (original description: Putative NEC1, Description = Bidirectional sugar transporter NEC1, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf04632_204031-210209' '(at2g02770 : 246.0) 4'-phosphopantetheinyl transferase superfamily; FUNCTIONS IN: holo-[acyl-carrier-protein] synthase activity, magnesium ion binding; INVOLVED IN: macromolecule biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: 4'-phosphopantetheinyl transferase (InterPro:IPR008278); BEST Arabidopsis thaliana protein match is: 4'-phosphopantetheinyl transferase superfamily (TAIR:AT3G11470.1); Has 1867 Blast hits to 1863 proteins in 711 species: Archae - 4; Bacteria - 1515; Metazoa - 102; Fungi - 36; Plants - 117; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|36163 : 138.0) no description available & (reliability: 492.0) & (original description: Putative HAS, Description = Holo-ACP synthase, PFAM = PF01648)' T '33.99' 'development.unspecified' 'niben101scf04641_314355-330142' '(at1g22770 : 1536.0) Together with CONSTANTS (CO) and FLOWERING LOCUS T (FT), GIGANTEA promotes flowering under long days in a circadian clock-controlled flowering pathway. GI acts earlier than CO and FT in the pathway by increasing CO and FT mRNA abundance. Located in the nucleus. Regulates several developmental processes, including photoperiod-mediated flowering, phytochrome B signaling, circadian clock, carbohydrate metabolism, and cold stress response. The gene's transcription is controlled by the circadian clock and it is post-transcriptionally regulated by light and dark. Forms a complex with FKF1 on the CO promoter to regulate CO expression.; GIGANTEA (GI); Has 351 Blast hits to 349 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 351; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q9awl7|gigan_orysa : 1466.0) Protein GIGANTEA - Oryza sativa (Rice) & (reliability: 3072.0) & (original description: Putative GI, Description = Protein GIGANTEA, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf04663_595867-644785' '(at2g25660 : 2764.0) embryo defective 2410 (emb2410); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF490 (InterPro:IPR007452); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 5528.0) & (original description: Putative emb2410, Description = Embryo defective 2410 protein, PFAM = PF04357)' T '33.99' 'development.unspecified' 'niben101scf04663_605239-607667' '(at2g25660 : 132.0) embryo defective 2410 (emb2410); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF490 (InterPro:IPR007452); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative emb2410, Description = Embryo defective 2410 protein, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf04664_539797-543139' '(gnl|cdd|68707 : 166.0) no description available & (at1g75520 : 147.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative SRS3, Description = Protein SHI RELATED SEQUENCE 3, PFAM = PF05142)' T '33.99' 'development.unspecified' 'niben101scf04714_352898-359134' '(at2g45190 : 243.0) Encodes a member of the YABBY family of transcriptional regulators that is involved in abaxial cell type specification in leaves and fruits. YAB1 acts in a non-cell autonomous fashion within the meristem to affect phyllotactic patterning. The non-autonomous effect on the central region of the meristem is mediated through the activity if Lateral Suppressor (LAS).; ABNORMAL FLORAL ORGANS (AFO); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT4G00180.1); Has 454 Blast hits to 452 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 436; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|68268 : 203.0) no description available & (q7xim7|yab1_orysa : 134.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 486.0) & (original description: Putative YAB1, Description = Axial regulator YABBY 1, PFAM = PF04690)' T '33.99' 'development.unspecified' 'niben101scf04754_265453-269186' '(at2g42840 : 127.0) Encodes a putative extracellular proline-rich protein is exclusively expressed in the L1 layer of vegetative, inflorescence and floral meristems and the protoderm of organ primordia.; protodermal factor 1 (PDF1); Has 74620 Blast hits to 36810 proteins in 1713 species: Archae - 153; Bacteria - 12776; Metazoa - 27126; Fungi - 11565; Plants - 10582; Viruses - 2385; Other Eukaryotes - 10033 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative PDF1, Description = BnaC04g48550D protein, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf04754_374798-383808' '(at1g29400 : 691.0) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices.; MEI2-like protein 5 (ML5); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like 3 (TAIR:AT4G18120.2); Has 6281 Blast hits to 5530 proteins in 358 species: Archae - 4; Bacteria - 106; Metazoa - 3185; Fungi - 1006; Plants - 1245; Viruses - 0; Other Eukaryotes - 735 (source: NCBI BLink). & (gnl|cdd|39859 : 351.0) no description available & (gnl|cdd|67666 : 187.0) no description available & (q27k34|pla2_orysa : 121.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (reliability: 1382.0) & (original description: Putative ML5, Description = Protein MEI2-like 5, PFAM = PF00076;PF00076;PF04059)' T '33.99' 'development.unspecified' 'niben101scf04776_87399-94423' '(at2g48120 : 300.0) The pale cress (pac) mutant affects chloroplast and leaf development; mutants are ABA-deficient and accumulate lower levels of carotenoids and chlorophyll compared to wild type. PAC is probably involved in chloroplast mRNA maturation. Three alternative transcripts of this gene exist.; PALE CRESS (PAC); Has 299 Blast hits to 297 proteins in 71 species: Archae - 0; Bacteria - 13; Metazoa - 176; Fungi - 25; Plants - 43; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 600.0) & (original description: Putative PAC, Description = Protein PALE CRESS, chloroplastic, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf04785_216581-228678' '(gnl|cdd|71337 : 180.0) no description available & (at5g48385 : 128.0) FRIGIDA-like protein; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT4G14900.1); Has 1269 Blast hits to 1187 proteins in 101 species: Archae - 0; Bacteria - 22; Metazoa - 72; Fungi - 9; Plants - 1133; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|35383 : 126.0) no description available & (reliability: 232.0) & (original description: Putative PGSC0003DMG400022488, Description = Putative myosin-10-like, PFAM = PF07899;PF07899;PF07899)' T '33.99' 'development.unspecified' 'niben101scf04815_31697-37058' '(at1g09380 : 423.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G07050.1); Has 5897 Blast hits to 5875 proteins in 1081 species: Archae - 84; Bacteria - 3492; Metazoa - 6; Fungi - 4; Plants - 1243; Viruses - 0; Other Eukaryotes - 1068 (source: NCBI BLink). & (reliability: 846.0) & (original description: Putative wat1, Description = WAT1-related protein, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf04871_106022-109077' '(at2g46080 : 377.0) CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT1G01550.2); Has 153 Blast hits to 139 proteins in 20 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 150; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 702.0) & (original description: Putative BPS1, Description = Protein BPS1, chloroplastic, PFAM = PF03087)' T '33.99' 'development.unspecified' 'niben101scf04886_53000-59282' '(at2g37670 : 743.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G02430.1); Has 38438 Blast hits to 23319 proteins in 700 species: Archae - 52; Bacteria - 5411; Metazoa - 15006; Fungi - 8500; Plants - 4706; Viruses - 3; Other Eukaryotes - 4760 (source: NCBI BLink). & (gnl|cdd|35504 : 520.0) no description available & (gnl|cdd|29257 : 133.0) no description available & (reliability: 1486.0) & (original description: Putative At2g37670, Description = Putative WD-40 repeat protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf04904_58507-61073' '(at5g47060 : 99.4) Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT4G17670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 198.8) & (original description: Putative dl4870c, Description = BnaC07g19900D protein, PFAM = PF04570)' T '33.99' 'development.unspecified' 'niben101scf04910_120367-135762' '(at2g03140 : 1155.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: esterase/lipase/thioesterase family protein (TAIR:AT3G50790.1). & (gnl|cdd|37049 : 297.0) no description available & (gnl|cdd|30778 : 156.0) no description available & (reliability: 2310.0) & (original description: Putative Os09g0436800, Description = CAAX amino terminal protease-like protein, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf04926_603577-607293' '(gnl|cdd|35526 : 356.0) no description available & (at4g33270 : 343.0) putative cdc20 protein (CDC20.1); CDC20.1; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT4G33260.1); Has 49595 Blast hits to 24757 proteins in 709 species: Archae - 60; Bacteria - 7548; Metazoa - 19325; Fungi - 10981; Plants - 5978; Viruses - 0; Other Eukaryotes - 5703 (source: NCBI BLink). & (gnl|cdd|29257 : 132.0) no description available & (reliability: 684.0) & (original description: Putative cdc20, Description = Anaphase-promoting complex subunit cdc20, PFAM = PF00400;PF00400;PF00400;PF12894)' T '33.99' 'development.unspecified' 'niben101scf04950_156277-162708' '(at2g22540 : 228.0) Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter.; SHORT VEGETATIVE PHASE (SVP); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 24 (TAIR:AT4G24540.1); Has 7281 Blast hits to 7260 proteins in 901 species: Archae - 3; Bacteria - 13; Metazoa - 824; Fungi - 296; Plants - 6010; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (q5k4r0|mad47_orysa : 170.0) MADS-box transcription factor 47 (OsMADS47) - Oryza sativa (Rice) & (gnl|cdd|29020 : 115.0) no description available & (reliability: 456.0) & (original description: Putative J, Description = MADS-box protein JOINTLESS, PFAM = PF00319;PF01486)' T '33.99' 'development.unspecified' 'niben101scf04955_818917-822315' '(at1g17140 : 137.0) Encodes a ROP/RAC effector, designated interactor of constitutive active ROPs 1 (ICR1), that interacts with GTP-bound ROPs. ICR1 is a scaffold mediating formation of protein complexes that are required for cell polarity. ICR1 is comprised of coiled-coil domains and forms complexes with itself and the exocyst vesicle-tethering complex subunit SEC3.; interactor of constitutive active rops 1 (ICR1); BEST Arabidopsis thaliana protein match is: ROP interactive partner 2 (TAIR:AT1G78430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative ICR4, Description = Interactor of constitutive active ROPs 4, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf04979_73985-77733' '(at3g48740 : 198.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: homolog of Medicago truncatula MTN3 (TAIR:AT5G23660.1); Has 1006 Blast hits to 953 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 236; Fungi - 0; Plants - 627; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|36836 : 161.0) no description available & (gnl|cdd|86234 : 96.0) no description available & (reliability: 396.0) & (original description: Putative MTN3, Description = Bidirectional sugar transporter SWEET, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf05005_210756-213370' '(gnl|cdd|70773 : 135.0) no description available & (at5g06320 : 128.0) encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus, spermine and Pseudomonas syringae pv. tomato DC3000. The gene product is localized to the plasma membrane.; NDR1/HIN1-like 3 (NHL3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response to virus, defense response to bacterium, response to bacterium; LOCATED IN: plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: NDR1/HIN1-like 2 (TAIR:AT3G11650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative hin9, Description = Harpin inducing protein 1-like 9, PFAM = PF03168)' T '33.99' 'development.unspecified' 'niben101scf05017_447680-452493' '(at3g55770 : 275.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1). & (p29675|sf3_helan : 182.0) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (gnl|cdd|36913 : 171.0) no description available & (reliability: 546.0) & (original description: Putative WLIM2B, Description = LIM domain-containing protein WLIM2b, PFAM = PF00412;PF00412)' T '33.99' 'development.unspecified' 'niben101scf05018_39842-50249' '(at4g19185 : 429.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G45370.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 786.0) & (original description: Putative At4g19185, Description = WAT1-related protein At4g19185, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf05030_58798-70709' '(at5g62310 : 1337.0) Encodes a protein with a serine/threonine kinase domain. There are two other closely related members in Arabidopsis. Knock-out mutation results in incomplete root hair elongation. Expression is found all organs examined but is especially strong in elongating root hairs.; INCOMPLETE ROOT HAIR ELONGATION (IRE); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G17850.1); Has 126848 Blast hits to 125224 proteins in 4803 species: Archae - 165; Bacteria - 15038; Metazoa - 47504; Fungi - 12892; Plants - 29759; Viruses - 507; Other Eukaryotes - 20983 (source: NCBI BLink). & (gnl|cdd|35826 : 702.0) no description available & (gnl|cdd|29142 : 299.0) no description available & (p47997|g11a_orysa : 172.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 2674.0) & (original description: Putative IRE, Description = Probable serine/threonine protein kinase IRE, PFAM = PF00069)' T '33.99' 'development.unspecified' 'niben101scf05030_63245-66804' '(at5g62310 : 421.0) Encodes a protein with a serine/threonine kinase domain. There are two other closely related members in Arabidopsis. Knock-out mutation results in incomplete root hair elongation. Expression is found all organs examined but is especially strong in elongating root hairs.; INCOMPLETE ROOT HAIR ELONGATION (IRE); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G17850.1); Has 126848 Blast hits to 125224 proteins in 4803 species: Archae - 165; Bacteria - 15038; Metazoa - 47504; Fungi - 12892; Plants - 29759; Viruses - 507; Other Eukaryotes - 20983 (source: NCBI BLink). & (gnl|cdd|35826 : 253.0) no description available & (gnl|cdd|47550 : 171.0) no description available & (p15792|kpk1_phavu : 100.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 842.0) & (original description: Putative cek1, Description = AGC protein kinase, PFAM = PF00069)' T '33.99' 'development.unspecified' 'niben101scf05030_481800-485637' '(at1g12260 : 288.0) Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.; NAC 007 (NAC007); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: Arabidopsis NAC domain containing protein 26 (TAIR:AT1G62700.1); Has 3158 Blast hits to 3153 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 2; Plants - 3027; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (q5z6b6|nac76_orysa : 213.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (gnl|cdd|66085 : 212.0) no description available & (reliability: 576.0) & (original description: Putative NAC007, Description = NAC domain-containing protein 7, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf05030_526471-532296' '(at4g25240 : 797.0) Encodes GPI-anchored SKU5-like protein.; SKU5 similar 1 (SKS1); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 2 (TAIR:AT5G51480.1); Has 5221 Blast hits to 5195 proteins in 927 species: Archae - 4; Bacteria - 1535; Metazoa - 283; Fungi - 1954; Plants - 1280; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (gnl|cdd|36477 : 573.0) no description available & (q00624|aso_brana : 439.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 141.0) no description available & (reliability: 1540.0) & (original description: Putative SKS1, Description = Monocopper oxidase-like protein SKS1, PFAM = PF00394;PF07732;PF07731)' T '33.99' 'development.unspecified' 'niben101scf05034_453218-459028' '(at4g00730 : 658.0) Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development; ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29139 : 175.0) no description available & (reliability: 1270.0) & (original description: Putative h3, Description = Homeodomain protein, PFAM = PF01852;PF00046)' T '33.99' 'development.unspecified' 'niben101scf05060_169610-171924' '(at1g26870 : 164.0) FEZ (FEZ); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 94 (TAIR:AT5G39820.1); Has 2973 Blast hits to 2966 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 2971; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 116.0) no description available & (q52qh4|nac68_orysa : 114.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 328.0) & (original description: Putative FEZ, Description = NAC domain-containing protein 42, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf05110_84413-89257' '(at2g23810 : 330.0) Member of TETRASPANIN family; tetraspanin8 (TET8); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, conserved site (InterPro:IPR018503), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: tetraspanin9 (TAIR:AT4G30430.1); Has 603 Blast hits to 600 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 0; Plants - 433; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|84702 : 106.0) no description available & (reliability: 660.0) & (original description: Putative TET8, Description = Tetraspanin-8, PFAM = PF00335)' T '33.99' 'development.unspecified' 'niben101scf05112_165326-170910' '(at4g21190 : 343.0) embryo defective 1417 (emb1417); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18975.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 686.0) & (original description: Putative Os01g0757700, Description = Os01g0757700 protein, PFAM = PF01535;PF01535)' T '33.99' 'development.unspecified' 'niben101scf05123_48817-54628' '(at1g72570 : 369.0) Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: AINTEGUMENTA-like 5 (TAIR:AT5G57390.1); Has 7692 Blast hits to 5276 proteins in 259 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 0; Plants - 7602; Viruses - 4; Other Eukaryotes - 74 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 323.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 94.2) no description available & (reliability: 676.0) & (original description: Putative AIL1, Description = AP2-like ethylene-responsive transcription factor AIL1, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'niben101scf05143_26124-28815' '(at4g21510 : 102.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G05010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative)' T '33.99' 'development.unspecified' 'niben101scf05173_562534-572031' '(at1g02090 : 290.0) encodes a phosphoprotein that is a subunit of the COP9 signalosome. Mutants exhibit constitutive photomorphogenic phenotype.; FUSCA 5 (FUS5); CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38460 : 252.0) no description available & (reliability: 580.0) & (original description: Putative CSN7, Description = COP9 signalosome complex subunit 7, PFAM = PF01399)' T '33.99' 'development.unspecified' 'niben101scf05175_435249-441430' '(at1g25580 : 486.0) Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage.; SUPPRESSOR OF GAMMA RADIATION 1 (SOG1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, response to gamma radiation, DNA damage checkpoint, regulation of meiosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 85 (TAIR:AT5G14490.1); Has 2166 Blast hits to 2160 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 22; Fungi - 5; Plants - 2134; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|66085 : 109.0) no description available & (reliability: 972.0) & (original description: Putative NAC008, Description = NAC domain-containing protein 8, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf05183_383570-391517' '(at5g20700 : 84.0) Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT1G74940.1); Has 476 Blast hits to 476 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 476; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative , Description = , PFAM = PF04570)' T '33.99' 'development.unspecified' 'niben101scf05190_106829-110492' '(at4g28500 : 300.0) NAC domain containing protein 73 (NAC073); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 10 (TAIR:AT1G28470.1); Has 2322 Blast hits to 2317 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2321; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66085 : 129.0) no description available & (reliability: 600.0) & (original description: Putative NAC1, Description = NAC transcription factor, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf05201_1156145-1160322' '(at5g12330 : 219.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Expressed in lateral root primordia and induced by auxin. SWP1 is involved in the repression of LRP1 via histone deacetylation.; LATERAL ROOT PRIMORDIUM 1 (LRP1); FUNCTIONS IN: protein homodimerization activity; INVOLVED IN: response to auxin stimulus, root development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Protein of unknown function DUF702 (InterPro:IPR007818), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2). & (gnl|cdd|68707 : 186.0) no description available & (reliability: 438.0) & (original description: Putative LRP1, Description = Protein LATERAL ROOT PRIMORDIUM 1, PFAM = PF05142)' T '33.99' 'development.unspecified' 'niben101scf05231_82615-86581' '(at3g30340 : 316.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT4G01440.1); Has 4418 Blast hits to 4395 proteins in 666 species: Archae - 30; Bacteria - 2090; Metazoa - 4; Fungi - 0; Plants - 1238; Viruses - 0; Other Eukaryotes - 1056 (source: NCBI BLink). & (reliability: 632.0) & (original description: Putative At4g01440, Description = WAT1-related protein At4g01440, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf05245_132650-138899' '(at1g31280 : 853.0) An Argonaute gene; argonaute 2 (AGO2); FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: ARGONAUTE 3 (TAIR:AT1G31290.1); Has 30240 Blast hits to 14140 proteins in 1171 species: Archae - 11; Bacteria - 7749; Metazoa - 10383; Fungi - 2602; Plants - 5076; Viruses - 357; Other Eukaryotes - 4062 (source: NCBI BLink). & (gnl|cdd|36259 : 654.0) no description available & (gnl|cdd|72942 : 460.0) no description available & (reliability: 1706.0) & (original description: Putative AGO2, Description = Protein argonaute 2, PFAM = PF08699;PF16486;PF16488;PF02170;PF02171)' T '33.99' 'development.unspecified' 'niben101scf05294_152586-169997' '(at2g34040 : 649.0) Apoptosis inhibitory protein 5 (API5); FUNCTIONS IN: binding; INVOLVED IN: anti-apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis inhibitory 5 (InterPro:IPR008383), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Apoptosis inhibitory protein 5 (API5) (TAIR:AT1G29030.1); Has 227 Blast hits to 217 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 6; Plants - 61; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|69441 : 622.0) no description available & (gnl|cdd|37424 : 452.0) no description available & (reliability: 1298.0) & (original description: Putative API5, Description = Apoptosis inhibitor 5-like protein API5, PFAM = PF05918)' T '33.99' 'development.unspecified' 'niben101scf05311_93961-106648' '(at1g22920 : 574.0) AJH1 encodes a protein similar to JAB1, a specific mammalian coactivator of AP-1 transcription. Encodes a subunit of the COP9 complex that is involved in protein deneddylation. Plants with mutations in CSN5A and CSN5B have a de-etiolated phenotype.; COP9 signalosome 5A (CSN5A); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: COP9-signalosome 5B (TAIR:AT1G71230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36767 : 552.0) no description available & (gnl|cdd|47561 : 127.0) no description available & (reliability: 1148.0) & (original description: Putative CSN5A, Description = COP9 signalosome complex subunit 5a, PFAM = PF01398)' T '33.99' 'development.unspecified' 'niben101scf05323_159034-163509' '(at1g28330 : 122.0) dormancy-associated protein (DRM1); dormancy-associated protein-like 1 (DYL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to fructose stimulus, response to sucrose stimulus, response to glucose stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dormancyauxin associated (InterPro:IPR008406); BEST Arabidopsis thaliana protein match is: Dormancy/auxin associated family protein (TAIR:AT2G33830.2). & (gnl|cdd|69106 : 119.0) no description available & (q05349|12kd_fraan : 97.1) Auxin-repressed 12.5 kDa protein - Fragaria ananassa (Strawberry) & (reliability: 244.0) & (original description: Putative DRMH1, Description = Dormancy-associated protein homolog 1, PFAM = PF05564)' T '33.99' 'development.unspecified' 'niben101scf05340_161996-165097' '(at2g41380 : 290.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G61210.1); Has 1429 Blast hits to 1424 proteins in 497 species: Archae - 6; Bacteria - 922; Metazoa - 80; Fungi - 179; Plants - 160; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (gnl|cdd|38220 : 235.0) no description available & (reliability: 580.0) & (original description: Putative SAM, Description = S-adenosylmethionine-dependent methyltransferase, PFAM = PF08241)' T '33.99' 'development.unspecified' 'niben101scf05340_162522-165157' '(at2g41380 : 224.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G61210.1); Has 1429 Blast hits to 1424 proteins in 497 species: Archae - 6; Bacteria - 922; Metazoa - 80; Fungi - 179; Plants - 160; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (gnl|cdd|38220 : 181.0) no description available & (reliability: 448.0) & (original description: Putative SAM, Description = S-adenosylmethionine-dependent methyltransferase, PFAM = PF08241)' T '33.99' 'development.unspecified' 'niben101scf05349_226284-231007' '(at4g10350 : 278.0) NAC domain protein. SMB, BRN1, and BRN2 act to regulate root cap maturation, in a partially redundant fashion.BRN1 and BRN2, control the cell wall maturation processes that are required to detach root cap layers from the root.; NAC domain containing protein 70 (NAC070); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 15 (TAIR:AT1G33280.1); Has 2970 Blast hits to 2965 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2970; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q5z6b6|nac76_orysa : 218.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (gnl|cdd|66085 : 203.0) no description available & (reliability: 556.0) & (original description: Putative BRN2, Description = Protein BEARSKIN2, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf05368_249698-253995' '(at2g37650 : 666.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 14 (TAIR:AT1G07530.1); Has 2417 Blast hits to 2350 proteins in 288 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 0; Plants - 2410; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|67150 : 337.0) no description available & (q8gve1|cigr2_orysa : 213.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (reliability: 1332.0) & (original description: Putative SCL9, Description = Scarecrow-like protein 9, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf05389_114482-119968' '(at2g37670 : 719.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G02430.1); Has 38438 Blast hits to 23319 proteins in 700 species: Archae - 52; Bacteria - 5411; Metazoa - 15006; Fungi - 8500; Plants - 4706; Viruses - 3; Other Eukaryotes - 4760 (source: NCBI BLink). & (gnl|cdd|35504 : 543.0) no description available & (gnl|cdd|29257 : 137.0) no description available & (reliability: 1438.0) & (original description: Putative BnaC03g00750D, Description = BnaC03g00750D protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf05402_195873-201166' '(at4g28190 : 313.0) Encodes a novel Cys-rich protein with a B-box like domain that acts as a negative regulator of meristem cell accumulation in inflorescence and floral meristems as loss-of-function ult1 mutations cause inflorescence meristem enlargement, the production of extra flowers and floral organs, and a decrease in floral meristem determinacy. Acts opposite to CLF which represses AG, but preventing deposition of CLF repressive methylation marks.; ULTRAPETALA1 (ULT1); INVOLVED IN: regulation of floral meristem growth, meristem determinacy, regulation of inflorescence meristem growth, floral meristem determinacy; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 19 growth stages; CONTAINS InterPro DOMAIN/s: Developmental regulator, ULTRAPETALA (InterPro:IPR020533); BEST Arabidopsis thaliana protein match is: Developmental regulator, ULTRAPETALA (TAIR:AT2G20825.1). & (reliability: 626.0) & (original description: Putative ULT1, Description = Protein ULTRAPETALA 1, PFAM = PF01342)' T '33.99' 'development.unspecified' 'niben101scf05407_128409-136394' '(at5g48450 : 800.0) Encodes a protein with two DUF26 domains and a signal peptide for secretion. The protein is transported to the apoplast when it is expressed as a GFP fusion protein.; SKU5 similar 3 (sks3); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT4G12420.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 572.0) no description available & (q00624|aso_brana : 457.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 151.0) no description available & (reliability: 1442.0) & (original description: Putative sks3, Description = Protein SKU5-like 3, PFAM = PF07731;PF07732;PF00394)' T '33.99' 'development.unspecified' 'niben101scf05461_49558-53040' '(at2g46770 : 301.0) NAC transcription factor NST1. NST1 and NST2 are redundant in regulating secondary wall thickening in anther walls and siliques. NST1 promoter was detected in various tissues in which lignified secondary walls develop.; EMBRYO DEFECTIVE 2301 (EMB2301); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain protein 66 (TAIR:AT3G61910.1); Has 2975 Blast hits to 2968 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 2973; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q5z6b6|nac76_orysa : 239.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (gnl|cdd|66085 : 206.0) no description available & (reliability: 602.0) & (original description: Putative nst3, Description = NAC trascription factor 3, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf05491_933624-938623' '(q9xh42|cet4_tobac : 347.0) CEN-like protein 4 - Nicotiana tabacum (Common tobacco) & (at2g27550 : 281.0) encodes a protein similar to TFL1. overexpression leads to similar phenotype as TFL1 overexpression. expressed specifically in the hypocotyl and null mutation does not result in phenotypes exhibited by TFL1 null mutations.; centroradialis (ATC); CONTAINS InterPro DOMAIN/s: Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); BEST Arabidopsis thaliana protein match is: PEBP (phosphatidylethanolamine-binding protein) family protein (TAIR:AT5G03840.1); Has 2165 Blast hits to 2165 proteins in 308 species: Archae - 0; Bacteria - 2; Metazoa - 605; Fungi - 111; Plants - 1396; Viruses - 3; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|38556 : 213.0) no description available & (gnl|cdd|29585 : 193.0) no description available & (reliability: 562.0) & (original description: Putative CET2, Description = CEN-like protein 2, PFAM = PF01161)' T '33.99' 'development.unspecified' 'niben101scf05519_103447-111964' '(at2g27040 : 1403.0) AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens.; ARGONAUTE 4 (AGO4); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Argonaute family protein (TAIR:AT5G21150.1). & (gnl|cdd|36259 : 756.0) no description available & (gnl|cdd|72942 : 469.0) no description available & (reliability: 2570.0) & (original description: Putative AGO4, Description = Protein argonaute 4, PFAM = PF16488;PF16486;PF02170;PF02171;PF08699)' T '33.99' 'development.unspecified' 'niben101scf05519_298819-302228' '(at1g50420 : 603.0) Encodes a scarecrow-like protein (SCL3) Putative transcription factors interacting with the gene product of VHA-B1 (vacuolar ATPase subunit B1; as shown through yeast two-hybrid assay).; scarecrow-like 3 (SCL3); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 21 (TAIR:AT2G04890.1); Has 3106 Blast hits to 2488 proteins in 309 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 3100; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 230.0) no description available & (q7g7j6|slr1_orysa : 213.0) DELLA protein SLR1 (Protein SLENDER RICE1) (Gibberellic acid-insensitive mutant protein) (OsGAI) - Oryza sativa (Rice) & (reliability: 1206.0) & (original description: Putative SCL3, Description = Scarecrow-like protein 3, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf05548_271442-282323' '(at5g56190 : 593.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G13340.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29257 : 90.4) no description available & (reliability: 1186.0) & (original description: Putative gbp3, Description = GAMYB-binding protein, PFAM = PF00400)' T '33.99' 'development.unspecified' 'niben101scf05554_626840-675425' '(at5g18410 : 2128.0) distorted trichomes and exhibits a diffuse actin cytoskeleton; PIROGI 121 (PIR121); FUNCTIONS IN: transcription activator activity; INVOLVED IN: actin nucleation, trichome morphogenesis, actin cytoskeleton organization; LOCATED IN: SCAR complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytoplasmic FMR1-interacting (InterPro:IPR008081); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69514 : 584.0) no description available & (gnl|cdd|38742 : 583.0) no description available & (reliability: 4256.0) & (original description: Putative PIR, Description = Protein PIR, PFAM = PF05994;PF07159)' T '33.99' 'development.unspecified' 'niben101scf05587_101897-105690' '(at2g39210 : 784.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G28120.1); Has 3072 Blast hits to 2927 proteins in 685 species: Archae - 32; Bacteria - 1223; Metazoa - 36; Fungi - 288; Plants - 601; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink). & (gnl|cdd|70288 : 302.0) no description available & (reliability: 1568.0) & (original description: Putative At2g39210, Description = At2g39210/T16B24.15, PFAM = PF07690;PF06813)' T '33.99' 'development.unspecified' 'niben101scf05609_270914-275936' '(at4g32551 : 82.4) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (reliability: 164.8) & (original description: Putative , Description = , PFAM = PF08513)' T '33.99' 'development.unspecified' 'niben101scf05610_156748-164516' '(at3g50670 : 283.0) Encodes U1 snRNP 70K; U1 small nuclear ribonucleoprotein-70K (U1-70K); FUNCTIONS IN: RNA binding, nucleotide binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U1 small nuclear ribonucleoprotein of 70kDa MW N-terminal (InterPro:IPR022023), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G43370.1); Has 501 Blast hits to 501 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 126; Plants - 97; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|35336 : 212.0) no description available & (reliability: 566.0) & (original description: Putative RNU1, Description = U1 small nuclear ribonucleoprotein 70 kDa, PFAM = PF00076;PF12220)' T '33.99' 'development.unspecified' 'niben101scf05618_522549-546653' '(at3g02310 : 221.0) MADS-box protein, binds K domain of AG in vivo; SEPALLATA 2 (SEP2); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7363 Blast hits to 7362 proteins in 916 species: Archae - 3; Bacteria - 0; Metazoa - 630; Fungi - 305; Plants - 6350; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (o65874|mtf1_pea : 215.0) MADS-box transcription factor 1 - Pisum sativum (Garden pea) & (gnl|cdd|29020 : 123.0) no description available & (gnl|cdd|35238 : 102.0) no description available & (reliability: 442.0) & (original description: Putative otg7, Description = MADS box protein DOMADS1, PFAM = PF01486;PF00319)' T '33.99' 'development.unspecified' 'niben101scf05619_20222-30521' '(at1g04140 : 705.0) Transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT5G43930.3); Has 24502 Blast hits to 11850 proteins in 489 species: Archae - 64; Bacteria - 6127; Metazoa - 7778; Fungi - 5629; Plants - 2081; Viruses - 0; Other Eukaryotes - 2823 (source: NCBI BLink). & (gnl|cdd|35487 : 91.4) no description available & (gnl|cdd|29257 : 83.5) no description available & (reliability: 1410.0) & (original description: Putative BnaA09g50670D, Description = BnaA09g50670D protein, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf05620_225763-264338' '(q39685|cmb1_diaca : 265.0) MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink) & (at5g15800 : 239.0) Encodes a MADS box transcription factor involved flower and ovule development. Functionally redundant with SEP2 and SEP3.; SEPALLATA1 (SEP1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT3G02310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29020 : 126.0) no description available & (gnl|cdd|35238 : 106.0) no description available & (reliability: 478.0) & (original description: Putative CMB1, Description = MADS-box protein CMB1, PFAM = PF01486;PF00319)' T '33.99' 'development.unspecified' 'niben101scf05620_225766-261813' '(q39685|cmb1_diaca : 260.0) MADS-box protein CMB1 - Dianthus caryophyllus (Carnation) (Clove pink) & (at3g02310 : 249.0) MADS-box protein, binds K domain of AG in vivo; SEPALLATA 2 (SEP2); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7363 Blast hits to 7362 proteins in 916 species: Archae - 3; Bacteria - 0; Metazoa - 630; Fungi - 305; Plants - 6350; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|29020 : 127.0) no description available & (gnl|cdd|35238 : 106.0) no description available & (reliability: 498.0) & (original description: Putative 37135, Description = Developmental protein SEPALLATA 1, PFAM = PF01486;PF00319)' T '33.99' 'development.unspecified' 'niben101scf05621_202815-209254' '(at1g67440 : 572.0) embryo defective 1688 (emb1688); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), EngC GTPase (InterPro:IPR010914), GTPase EngC (InterPro:IPR004881); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT1G67460.1); Has 5395 Blast hits to 5393 proteins in 2047 species: Archae - 18; Bacteria - 4575; Metazoa - 3; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 734 (source: NCBI BLink). & (gnl|cdd|78783 : 328.0) no description available & (reliability: 1144.0) & (original description: Putative rsgA, Description = Putative ribosome biogenesis GTPase RsgA, PFAM = PF03193)' T '33.99' 'development.unspecified' 'niben101scf05643_90297-99609' '(at3g46630 : 221.0) Protein of unknown function (DUF3223); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3223 (InterPro:IPR021602); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3223) (TAIR:AT1G45230.1); Has 180 Blast hits to 180 proteins in 34 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative NRPE1, Description = DNA-directed RNA polymerase, PFAM = PF11523)' T '33.99' 'development.unspecified' 'niben101scf05668_178894-182054' '(at5g23730 : 402.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G52250.1); Has 12290 Blast hits to 8463 proteins in 487 species: Archae - 16; Bacteria - 2654; Metazoa - 3890; Fungi - 2899; Plants - 1307; Viruses - 0; Other Eukaryotes - 1524 (source: NCBI BLink). & (p93471|cop1_pea : 191.0) E3 ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive photomorphogenesis protein 1) - Pisum sativum (Garden pea) & (gnl|cdd|29257 : 119.0) no description available & (gnl|cdd|35498 : 86.2) no description available & (reliability: 804.0) & (original description: Putative RUP2, Description = WD repeat-containing protein RUP2, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf05710_71152-78765' '(gnl|cdd|70383 : 461.0) no description available & (at2g17840 : 397.0) Identified as drought-inducible gene by differential hybridization. Upregulated by high light, drought, cold and salt stress determined by microarray analysis.; EARLY-RESPONSIVE TO DEHYDRATION 7 (ERD7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, response to high light intensity, response to salt stress, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Senescence/spartin-associated (InterPro:IPR009686); BEST Arabidopsis thaliana protein match is: Senescence/dehydration-associated protein-related (TAIR:AT4G35985.1); Has 250 Blast hits to 250 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 66; Fungi - 39; Plants - 134; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 794.0) & (original description: Putative ERD7, Description = AT3g51250/F24M12_290, PFAM = PF06911)' T '33.99' 'development.unspecified' 'niben101scf05711_38441-42786' '(at3g11980 : 701.0) Similar to fatty acid reductases.; MALE STERILITY 2 (MS2); FUNCTIONS IN: fatty-acyl-CoA reductase (alcohol-forming) activity, oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor; INVOLVED IN: microsporogenesis, pollen exine formation; LOCATED IN: chloroplast; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Male sterility (InterPro:IPR004262), NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 6 (TAIR:AT3G56700.1); Has 2390 Blast hits to 2358 proteins in 427 species: Archae - 4; Bacteria - 606; Metazoa - 985; Fungi - 290; Plants - 282; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (gnl|cdd|36435 : 462.0) no description available & (gnl|cdd|87425 : 243.0) no description available & (reliability: 1402.0) & (original description: Putative ms2, Description = Male sterility protein 2, PFAM = PF07993;PF03015)' T '33.99' 'development.unspecified' 'niben101scf05733_67669-75348' '(at5g37930 : 179.0) Protein with RING/U-box and TRAF-like domains; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: multicellular organismal development, ubiquitin-dependent protein catabolic process, protein ubiquitination; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), TRAF-like (InterPro:IPR008974), Seven-in-absentia protein, TRAF-like domain (InterPro:IPR018121), Zinc finger, SIAH-type (InterPro:IPR013010), Seven In Absentia Homolog-type (InterPro:IPR013323), Seven-in-absentia protein, sina (InterPro:IPR004162); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT1G66650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38212 : 162.0) no description available & (reliability: 358.0) & (original description: Putative BnaUnng02700D, Description = BnaUnng02700D protein, PFAM = PF03145)' T '33.99' 'development.unspecified' 'niben101scf05750_476167-495030' '(at5g63420 : 1159.0) embryo defective 2746 (emb2746); FUNCTIONS IN: hydrolase activity, DNA binding, catalytic activity; INVOLVED IN: metabolic process, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-lactamase-like (InterPro:IPR001279), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G38250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36352 : 436.0) no description available & (gnl|cdd|30940 : 407.0) no description available & (reliability: 2318.0) & (original description: Putative myb1, Description = Regulator of transcription that contains myb domains, PFAM = PF07521;PF12706;PF13837)' T '33.99' 'development.unspecified' 'niben101scf05755_172826-182620' '(at3g15880 : 1640.0) WUS-interacting protein 2 (WSIP2); FUNCTIONS IN: protein binding; INVOLVED IN: primary shoot apical meristem specification; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT1G15750.4). & (gnl|cdd|35487 : 133.0) no description available & (gnl|cdd|29257 : 122.0) no description available & (reliability: 3280.0) & (original description: Putative ASP1, Description = Topless-related protein 1, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf05821_43133-46774' '(at3g48740 : 261.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: homolog of Medicago truncatula MTN3 (TAIR:AT5G23660.1); Has 1006 Blast hits to 953 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 236; Fungi - 0; Plants - 627; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|36836 : 230.0) no description available & (gnl|cdd|86234 : 92.5) no description available & (reliability: 522.0) & (original description: Putative SWEET10, Description = Bidirectional sugar transporter SWEET10, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf05821_96077-101638' '(at3g48740 : 248.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: homolog of Medicago truncatula MTN3 (TAIR:AT5G23660.1); Has 1006 Blast hits to 953 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 236; Fungi - 0; Plants - 627; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|36836 : 227.0) no description available & (gnl|cdd|86234 : 91.3) no description available & (reliability: 496.0) & (original description: Putative SWEET12, Description = Bidirectional sugar transporter SWEET12, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf05821_221461-224906' '(at5g13180 : 220.0) Encodes a NAC domain transcription factor that interacts with VND7 and negatively regulates xylem vessel formation.; NAC domain containing protein 83 (NAC083); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 41 (TAIR:AT2G33480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66085 : 171.0) no description available & (q52qh4|nac68_orysa : 148.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 440.0) & (original description: Putative NAC2, Description = NAC transcription factor, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf05948_296310-302791' '(at4g18830 : 106.0) Member of the ovate protein family.Interacts with BLH1 and KNAT3. Regulates the subcellular localization of BLH1.; ovate family protein 5 (OFP5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 4 (TAIR:AT1G06920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68419 : 82.6) no description available & (reliability: 212.0) & (original description: Putative OFP1, Description = Ovate transcriptional repressor, PFAM = PF04844)' T '33.99' 'development.unspecified' 'niben101scf05948_772017-775384' '(at1g29300 : 390.0) unfertilized embryo sac 1 (UNE1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF641) (TAIR:AT3G14870.3); Has 320 Blast hits to 319 proteins in 42 species: Archae - 0; Bacteria - 33; Metazoa - 5; Fungi - 2; Plants - 274; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|68434 : 143.0) no description available & (reliability: 780.0) & (original description: Putative BnaC03g76000D, Description = BnaC03g76000D protein, PFAM = PF04859)' T '33.99' 'development.unspecified' 'niben101scf05963_28685-57254' '(at3g43660 : 207.0) Vacuolar iron transporter (VIT) family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217); BEST Arabidopsis thaliana protein match is: Vacuolar iron transporter (VIT) family protein (TAIR:AT3G43630.1); Has 1844 Blast hits to 1835 proteins in 644 species: Archae - 71; Bacteria - 1261; Metazoa - 0; Fungi - 84; Plants - 213; Viruses - 0; Other Eukaryotes - 215 (source: NCBI BLink). & (gnl|cdd|39674 : 204.0) no description available & (p16313|no21_soybn : 149.0) Nodulin 21 (N-21) - Glycine max (Soybean) & (gnl|cdd|85817 : 144.0) no description available & (reliability: 414.0) & (original description: Putative At3g43660, Description = Vacuolar iron transporter homolog 4, PFAM = PF01988;PF01988)' T '33.99' 'development.unspecified' 'niben101scf05963_54492-58884' '(at3g43660 : 218.0) Vacuolar iron transporter (VIT) family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217); BEST Arabidopsis thaliana protein match is: Vacuolar iron transporter (VIT) family protein (TAIR:AT3G43630.1); Has 1844 Blast hits to 1835 proteins in 644 species: Archae - 71; Bacteria - 1261; Metazoa - 0; Fungi - 84; Plants - 213; Viruses - 0; Other Eukaryotes - 215 (source: NCBI BLink). & (gnl|cdd|39674 : 209.0) no description available & (p16313|no21_soybn : 157.0) Nodulin 21 (N-21) - Glycine max (Soybean) & (gnl|cdd|29967 : 148.0) no description available & (reliability: 436.0) & (original description: Putative SEN1, Description = Nodulin-21, PFAM = PF01988;PF01988)' T '33.99' 'development.unspecified' 'niben101scf05963_58474-61127' '(at3g43660 : 211.0) Vacuolar iron transporter (VIT) family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217); BEST Arabidopsis thaliana protein match is: Vacuolar iron transporter (VIT) family protein (TAIR:AT3G43630.1); Has 1844 Blast hits to 1835 proteins in 644 species: Archae - 71; Bacteria - 1261; Metazoa - 0; Fungi - 84; Plants - 213; Viruses - 0; Other Eukaryotes - 215 (source: NCBI BLink). & (gnl|cdd|39674 : 202.0) no description available & (p16313|no21_soybn : 155.0) Nodulin 21 (N-21) - Glycine max (Soybean) & (gnl|cdd|85817 : 137.0) no description available & (reliability: 422.0) & (original description: Putative SEN1, Description = Nodulin-21, PFAM = PF01988;PF01988)' T '33.99' 'development.unspecified' 'niben101scf05963_61181-63837' '(at3g43660 : 218.0) Vacuolar iron transporter (VIT) family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217); BEST Arabidopsis thaliana protein match is: Vacuolar iron transporter (VIT) family protein (TAIR:AT3G43630.1); Has 1844 Blast hits to 1835 proteins in 644 species: Archae - 71; Bacteria - 1261; Metazoa - 0; Fungi - 84; Plants - 213; Viruses - 0; Other Eukaryotes - 215 (source: NCBI BLink). & (gnl|cdd|39674 : 196.0) no description available & (p16313|no21_soybn : 162.0) Nodulin 21 (N-21) - Glycine max (Soybean) & (gnl|cdd|85817 : 135.0) no description available & (reliability: 436.0) & (original description: Putative At3g43630, Description = Vacuolar iron transporter homolog 3, PFAM = PF01988;PF01988)' T '33.99' 'development.unspecified' 'niben101scf05982_163207-176012' '(at1g02010 : 899.0) member of KEULE Gene Family; secretory 1A (SEC1A); FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, vesicle-mediated transport, vesicle docking involved in exocytosis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: Sec1/munc18-like (SM) proteins superfamily (TAIR:AT1G12360.1). & (q7xwp3|sec1a_orysa : 802.0) Probable protein transport Sec1a - Oryza sativa (Rice) & (gnl|cdd|36514 : 588.0) no description available & (gnl|cdd|85171 : 292.0) no description available & (reliability: 1798.0) & (original description: Putative SEC1A, Description = Protein transport Sec1a, PFAM = PF00995)' T '33.99' 'development.unspecified' 'niben101scf05982_219570-231495' '(at4g00090 : 602.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: periodic tryptophan protein 2 (TAIR:AT1G15440.2); Has 19942 Blast hits to 11235 proteins in 520 species: Archae - 42; Bacteria - 5638; Metazoa - 5982; Fungi - 4099; Plants - 1742; Viruses - 0; Other Eukaryotes - 2439 (source: NCBI BLink). & (gnl|cdd|37307 : 430.0) no description available & (gnl|cdd|29257 : 106.0) no description available & (reliability: 1204.0) & (original description: Putative At4g00090, Description = AT4g00090/F6N15_8, PFAM = PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf05997_86604-90544' '(at3g54220 : 415.0) Encodes a member of a novel family having similarity to DNA binding proteins containing basic-leucine zipper regions; scr is expressed in cortex/endodermal initial cells and in the endodermal cell lineage. Regulates the radial organization of the root. Is required cell-autonomously for distal specification of the quiescent center, which in turn regulates stem cell fate of immediately surrounding cells. SCR appears to be a direct target of SHR.; SCARECROW (SCR); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G41920.1); Has 4362 Blast hits to 4213 proteins in 491 species: Archae - 0; Bacteria - 22; Metazoa - 838; Fungi - 368; Plants - 2661; Viruses - 19; Other Eukaryotes - 454 (source: NCBI BLink). & (gnl|cdd|67150 : 285.0) no description available & (q8s4w7|gai1_vitvi : 211.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 830.0) & (original description: Putative SCL23, Description = Scarecrow-like protein 23, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf06016_926506-932545' '(at1g22160 : 83.6) Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT1G78020.1); Has 511 Blast hits to 511 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 511; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative , Description = , PFAM = PF04570)' T '33.99' 'development.unspecified' 'niben101scf06043_85609-122696' '(at5g15540 : 1867.0) Encodes Adherin SCC2. Essential for viability. Required for normal seed development. Plays a role in the establishment of sister-chromatid cohesion and chromosome organization during meiosis.; EMBRYO DEFECTIVE 2773 (EMB2773); FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: centromere complex assembly, sister chromatid cohesion, embryo development ending in seed dormancy, meiotic sister chromatid cohesion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Armadillo-type fold (InterPro:IPR016024), Zinc finger, PHD-finger (InterPro:IPR019787). & (gnl|cdd|36238 : 1012.0) no description available & (reliability: 3734.0) & (original description: Putative EMB2773, Description = Sister chromatid cohesion 2, PFAM = PF12830;PF12765)' T '33.99' 'development.unspecified' 'niben101scf06076_76246-83178' '(q42429|agl8_soltu : 239.0) Agamous-like MADS-box protein AGL8 homolog (POTM1-1) - Solanum tuberosum (Potato) & (at1g69120 : 232.0) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.; APETALA1 (AP1); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 8031 Blast hits to 8015 proteins in 981 species: Archae - 10; Bacteria - 56; Metazoa - 785; Fungi - 329; Plants - 6623; Viruses - 2; Other Eukaryotes - 226 (source: NCBI BLink). & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 102.0) no description available & (reliability: 464.0) & (original description: Putative m4, Description = FRUITFULL-like protein, PFAM = PF01486;PF00319)' T '33.99' 'development.unspecified' 'niben101scf06076_76859-81626' '(at1g69120 : 179.0) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.; APETALA1 (AP1); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 8031 Blast hits to 8015 proteins in 981 species: Archae - 10; Bacteria - 56; Metazoa - 785; Fungi - 329; Plants - 6623; Viruses - 2; Other Eukaryotes - 226 (source: NCBI BLink). & (q41276|ap1_sinal : 174.0) Floral homeotic protein APETALA1 (MADS C) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|29020 : 104.0) no description available & (reliability: 358.0) & (original description: Putative m15, Description = FRUITFULL-like protein, PFAM = PF00319;PF01486)' T '33.99' 'development.unspecified' 'niben101scf06080_40589-47621' '(at3g59550 : 307.0) Encodes an alpha-kleisin protein that is localized primarily in the nucleolus and is essential for megagametogenesis and plays an important role in pollen development. alpha-kleisins are core components of meiotic and mitotic cohesin complexes.; SYN3; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitosis, megagametogenesis, pollen development; LOCATED IN: nucleolus, nucleus, nuclear cohesin complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rad21/Rec8 like protein, C-terminal (InterPro:IPR006909), Rad21/Rec8 like protein, N-terminal (InterPro:IPR006910); BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT4G05360.1); Has 1082 Blast hits to 944 proteins in 221 species: Archae - 0; Bacteria - 42; Metazoa - 397; Fungi - 305; Plants - 228; Viruses - 4; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|36427 : 196.0) no description available & (gnl|cdd|68400 : 120.0) no description available & (reliability: 614.0) & (original description: Putative rec8, Description = Sister chromatid cohesion 1 protein 3, PFAM = PF04825;PF04824)' T '33.99' 'development.unspecified' 'niben101scf06087_264757-272044' '(at1g68170 : 223.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: embryo, leaf whorl, seed; EXPRESSED DURING: C globular stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G25270.1); Has 2511 Blast hits to 2498 proteins in 458 species: Archae - 10; Bacteria - 1084; Metazoa - 4; Fungi - 0; Plants - 1225; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative wat1, Description = WAT1-related protein, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf06087_836561-841673' '(at1g25270 : 231.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G68170.1); Has 2335 Blast hits to 2323 proteins in 458 species: Archae - 9; Bacteria - 937; Metazoa - 4; Fungi - 9; Plants - 1230; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative PGSC0003DMG400003966, Description = WAT1-related protein, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf06087_836579-841512' '(at1g68170 : 154.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: embryo, leaf whorl, seed; EXPRESSED DURING: C globular stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G25270.1); Has 2511 Blast hits to 2498 proteins in 458 species: Archae - 10; Bacteria - 1084; Metazoa - 4; Fungi - 0; Plants - 1225; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative TCM_001343, Description = WAT1-related protein, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf06087_912192-919855' '(at5g64700 : 314.0) nodulin MtN21 /EamA-like transporter family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G43650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 628.0) & (original description: Putative At5g64700, Description = WAT1-related protein At5g64700, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf06153_153299-156801' '(at4g17980 : 241.0) NAC domain containing protein 71 (NAC071); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 96 (TAIR:AT5G46590.1); Has 2972 Blast hits to 2965 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2972; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 218.0) no description available & (q7gcl7|nac74_orysa : 165.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 482.0) & (original description: Putative NH11, Description = Nam-like protein 11, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf06162_70800-77785' '(at3g59550 : 301.0) Encodes an alpha-kleisin protein that is localized primarily in the nucleolus and is essential for megagametogenesis and plays an important role in pollen development. alpha-kleisins are core components of meiotic and mitotic cohesin complexes.; SYN3; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitosis, megagametogenesis, pollen development; LOCATED IN: nucleolus, nucleus, nuclear cohesin complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rad21/Rec8 like protein, C-terminal (InterPro:IPR006909), Rad21/Rec8 like protein, N-terminal (InterPro:IPR006910); BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT4G05360.1); Has 1082 Blast hits to 944 proteins in 221 species: Archae - 0; Bacteria - 42; Metazoa - 397; Fungi - 305; Plants - 228; Viruses - 4; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|36427 : 185.0) no description available & (gnl|cdd|68400 : 120.0) no description available & (reliability: 602.0) & (original description: Putative rec8, Description = AtRAD21-3, PFAM = PF04825;PF04824)' T '33.99' 'development.unspecified' 'niben101scf06164_11135-14363' '(at5g62850 : 254.0) Encodes a protein that is expressed in vegetative cells of pollen.; VEGETATIVE CELL EXPRESSED1 (AtVEX1); INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT3G28007.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36836 : 196.0) no description available & (reliability: 508.0) & (original description: Putative std1, Description = Bidirectional sugar transporter SWEET, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf06186_176095-181444' '(at5g52510 : 414.0) SCARECROW-like 8 (SCL8); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 1 (TAIR:AT1G21450.1); Has 2327 Blast hits to 2305 proteins in 315 species: Archae - 0; Bacteria - 4; Metazoa - 13; Fungi - 36; Plants - 2242; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|67150 : 256.0) no description available & (q69vg1|cigr1_orysa : 243.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (reliability: 828.0) & (original description: Putative SCL8, Description = Scarecrow-like protein 8, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf06280_162409-166546' '(gnl|cdd|70011 : 154.0) no description available & (at3g48140 : 139.0) B12D protein; CONTAINS InterPro DOMAIN/s: B12D (InterPro:IPR010530); BEST Arabidopsis thaliana protein match is: B12D protein (TAIR:AT3G29970.1); Has 143 Blast hits to 143 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative b12D, Description = B12D-like protein, PFAM = PF06522)' T '33.99' 'development.unspecified' 'niben101scf06311_217814-221035' '(at1g06990 : 169.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT2G24560.1); Has 3486 Blast hits to 3444 proteins in 207 species: Archae - 0; Bacteria - 314; Metazoa - 0; Fungi - 25; Plants - 3124; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|58514 : 168.0) no description available & (p40603|apg_brana : 103.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 320.0) & (original description: Putative T3G21, Description = GDSL esterase/lipase EXL3, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf06332_198450-202195' '(q69vg1|cigr1_orysa : 583.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (at5g48150 : 503.0) Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway.; phytochrome a signal transduction 1 (PAT1); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 21 (TAIR:AT2G04890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67150 : 304.0) no description available & (reliability: 946.0) & (original description: Putative CIGR1, Description = Chitin-inducible gibberellin-responsive protein 1, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf06347_219872-232968' '(at3g47650 : 105.0) DnaJ/Hsp40 cysteine-rich domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 88 Blast hits to 88 proteins in 28 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative bsd2, Description = Bundle sheath defective protein 2, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf06375_395158-398054' '(at1g78020 : 114.0) Protein of unknown function (DUF581); EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT1G22160.1); Has 525 Blast hits to 525 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 525; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68153 : 84.6) no description available & (reliability: 228.0) & (original description: Putative , Description = , PFAM = PF04570)' T '33.99' 'development.unspecified' 'niben101scf06407_194024-202313' '(q8lsn2|bbm2_brana : 393.0) Protein BABY BOOM 2 (BnBBM2) - Brassica napus (Rape) & (at5g17430 : 377.0) Encodes an AP2-domain containing protein similar to ANT. Expressed in embryos and lateral root primordium.; BABY BOOM (BBM); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G51190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47695 : 93.4) no description available & (reliability: 704.0) & (original description: Putative BBM, Description = AP2-like ethylene-responsive transcription factor BBM, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'niben101scf06424_195506-222973' '(at3g05680 : 975.0) embryo defective 2016 (EMB2016); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown. & (gnl|cdd|40019 : 724.0) no description available & (reliability: 1950.0) & (original description: Putative At3g05680, Description = F18C1.5 protein, PFAM = PF15912)' T '33.99' 'development.unspecified' 'niben101scf06439_282347-291354' '(at2g43500 : 732.0) Plant regulator RWP-RK family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT3G59580.2); Has 665 Blast hits to 521 proteins in 81 species: Archae - 0; Bacteria - 147; Metazoa - 3; Fungi - 2; Plants - 476; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|65798 : 83.9) no description available & (reliability: 1430.0) & (original description: Putative NLP8, Description = Protein NLP8, PFAM = PF00564;PF02042)' T '33.99' 'development.unspecified' 'niben101scf06483_196867-215744' '(at2g34780 : 150.0) Encodes a novel protein of unknown function that is essential for embryonic development. Severe loss of function alleles are embryo lethal. Analysis of a partial loss of function allele indicates a role for EMB1611 in regulation of endoreduplication and maintenance of meristem cell fate. It appears to be required for maintaining the CLV-WUS regulatory pathway.; MATERNAL EFFECT EMBRYO ARREST 22 (MEE22); INVOLVED IN: negative regulation of DNA endoreduplication, meristem structural organization, embryo development ending in seed dormancy, maintenance of meristem identity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. & (gnl|cdd|35383 : 88.4) no description available & (reliability: 300.0) & (original description: Putative , Description = Putative nucleoprotein TPR-like, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf06493_151433-160782' '(at1g69120 : 217.0) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.; APETALA1 (AP1); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 8031 Blast hits to 8015 proteins in 981 species: Archae - 10; Bacteria - 56; Metazoa - 785; Fungi - 329; Plants - 6623; Viruses - 2; Other Eukaryotes - 226 (source: NCBI BLink). & (q41276|ap1_sinal : 216.0) Floral homeotic protein APETALA1 (MADS C) - Sinapis alba (White mustard) (Brassica hirta) & (gnl|cdd|29020 : 119.0) no description available & (gnl|cdd|35238 : 100.0) no description available & (reliability: 434.0) & (original description: Putative AGL8, Description = Agamous-like MADS-box protein AGL8, PFAM = PF00319;PF01486)' T '33.99' 'development.unspecified' 'niben101scf06509_404245-411284' '(at4g15450 : 384.0) Senescence/dehydration-associated protein-related; CONTAINS InterPro DOMAIN/s: Senescence/spartin-associated (InterPro:IPR009686); BEST Arabidopsis thaliana protein match is: Senescence/dehydration-associated protein-related (TAIR:AT3G21600.1); Has 171 Blast hits to 171 proteins in 35 species: Archae - 0; Bacteria - 4; Metazoa - 29; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|70383 : 359.0) no description available & (reliability: 768.0) & (original description: Putative , Description = Helicase-like protein, PFAM = PF06911)' T '33.99' 'development.unspecified' 'niben101scf06517_174800-210962' '(at1g58250 : 2935.0) SABRE, putative gene of unknown function, homologous to maize apt1 gene. Required for normal cell expansion in the root cortex. The sabre mutation results in abnormal cell expansion. Encodes a rare message; very low level of expression was detected in roots and shoots.; SABRE (SAB); CONTAINS InterPro DOMAIN/s: Protein of unknown function FMP27, domain-6, C-terminal (InterPro:IPR019443), Protein of unknown function FMP27, domain-4 (InterPro:IPR019441); BEST Arabidopsis thaliana protein match is: Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain (TAIR:AT5G49680.2). & (gnl|cdd|37121 : 1169.0) no description available & (reliability: 5870.0) & (original description: Putative HPS4, Description = Golgi-body localization protein, PFAM = PF10351;PF10347)' T '33.99' 'development.unspecified' 'niben101scf06560_87943-96831' '(q42429|agl8_soltu : 236.0) Agamous-like MADS-box protein AGL8 homolog (POTM1-1) - Solanum tuberosum (Potato) & (at1g69120 : 235.0) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.; APETALA1 (AP1); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 8031 Blast hits to 8015 proteins in 981 species: Archae - 10; Bacteria - 56; Metazoa - 785; Fungi - 329; Plants - 6623; Viruses - 2; Other Eukaryotes - 226 (source: NCBI BLink). & (gnl|cdd|29020 : 122.0) no description available & (gnl|cdd|35238 : 104.0) no description available & (reliability: 470.0) & (original description: Putative FUL1, Description = Fruitful 1, PFAM = PF00319;PF01486)' T '33.99' 'development.unspecified' 'niben101scf06588_132295-135580' '(at1g61110 : 227.0) NAC domain containing protein 25 (NAC025); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 2 (TAIR:AT3G15510.1); Has 3019 Blast hits to 3014 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3011; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q52qh4|nac68_orysa : 197.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 195.0) no description available & (reliability: 454.0) & (original description: Putative JA, Description = NAC domain-containing protein 29, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf06621_368644-378829' '(at5g61900 : 778.0) Encodes a plasma-membrane localized, copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Mutants exhibit temperature-sensitive growth defects and increased hypersensitive response where permissive conditions are low temperature (22 degrees Celsius) and low humidity. Gene is expressed at 22 but not at 28 (restrictive condition) degrees. Lethality of double mutants with BON3 can be partially suppressed by SNC1. Double mutants show defects in development that are genetically separable from hypersensitive/cell death response.; BONZAI 1 (BON1); FUNCTIONS IN: calcium-dependent phospholipid binding; INVOLVED IN: in 7 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36541 : 509.0) no description available & (gnl|cdd|29232 : 314.0) no description available & (reliability: 1534.0) & (original description: Putative BON1, Description = Protein BONZAI 1, PFAM = PF07002;PF00168;PF00168)' T '33.99' 'development.unspecified' 'niben101scf06668_421443-426162' '(at5g41790 : 114.0) encodes a protein that physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. expression is not regulated by light.; COP1-interactive protein 1 (CIP1); FUNCTIONS IN: protein binding; INVOLVED IN: regulation of protein import into nucleus; LOCATED IN: cytoskeleton, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G64330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35383 : 95.3) no description available & (reliability: 228.0) & (original description: Putative PGSC0003DMG400004988, Description = Putative intracellular protein transport protein USO1-like, PFAM = PF07765)' T '33.99' 'development.unspecified' 'niben101scf06702_34888-52416' '(at1g22920 : 574.0) AJH1 encodes a protein similar to JAB1, a specific mammalian coactivator of AP-1 transcription. Encodes a subunit of the COP9 complex that is involved in protein deneddylation. Plants with mutations in CSN5A and CSN5B have a de-etiolated phenotype.; COP9 signalosome 5A (CSN5A); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: COP9-signalosome 5B (TAIR:AT1G71230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36767 : 550.0) no description available & (gnl|cdd|47561 : 127.0) no description available & (reliability: 1148.0) & (original description: Putative CSN5B, Description = COP9 signalosome complex subunit 5b, PFAM = PF01398)' T '33.99' 'development.unspecified' 'niben101scf06772_55473-65983' '(at4g03240 : 82.0) Encodes AtFH, a frataxin homolog. Frataxin is required for the biogenesis of mitochondria in different organisms. AtFH knock-out mutants are lethal. Required for full activity of mitochondrial Fe-S proteins. Deficiency of AtFH induces oxidative stress.; frataxin homolog (FH); CONTAINS InterPro DOMAIN/s: Frataxin (InterPro:IPR017789), Frataxin conserved site (InterPro:IPR020895), Frataxin-like (InterPro:IPR002908); Has 1148 Blast hits to 1148 proteins in 551 species: Archae - 0; Bacteria - 783; Metazoa - 128; Fungi - 127; Plants - 48; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative ATFH, Description = Frataxin, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf06825_486685-505912' '(q6eu39|mads6_orysa : 132.0) MADS-box transcription factor 6 (OsMADS6) - Oryza sativa (Rice) & (at2g45650 : 130.0) sequence suggests this encodes a MADS-box transcription factor; AGAMOUS-like 6 (AGL6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, floral organ development; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 13 (TAIR:AT3G61120.1); Has 7294 Blast hits to 7293 proteins in 914 species: Archae - 0; Bacteria - 0; Metazoa - 630; Fungi - 307; Plants - 6281; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|29020 : 112.0) no description available & (gnl|cdd|35238 : 89.3) no description available & (reliability: 240.0) & (original description: Putative defh7, Description = Putative MADS-domain transcription factor DEFH7, PFAM = PF01486;PF00319)' T '33.99' 'development.unspecified' 'niben101scf06862_3428-7596' '(at2g02450 : 308.0) NAC domain containing protein 35 (NAC035); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 94 (TAIR:AT5G39820.1); Has 5401 Blast hits to 4721 proteins in 140 species: Archae - 0; Bacteria - 7; Metazoa - 144; Fungi - 68; Plants - 2924; Viruses - 5; Other Eukaryotes - 2253 (source: NCBI BLink). & (gnl|cdd|66085 : 212.0) no description available & (q7f2l3|nac48_orysa : 174.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (reliability: 616.0) & (original description: Putative NAC035, Description = NAC domain-containing protein 35, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf06876_207970-212955' '(at5g27980 : 113.0) Seed maturation protein; CONTAINS InterPro DOMAIN/s: Seed maturation protein (InterPro:IPR007011); BEST Arabidopsis thaliana protein match is: Seed maturation protein (TAIR:AT3G22490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p09444|lea34_goshi : 110.0) Late embryogenesis abundant protein D-34 (LEA D-34) - Gossypium hirsutum (Upland cotton) & (reliability: 226.0) & (original description: Putative At5g27980, Description = Late embryogenesis abundant protein 47, PFAM = PF04927;PF04927)' T '33.99' 'development.unspecified' 'niben101scf06913_35368-89961' '(at3g06790 : 135.0) plastid developmental protein DAG, putative; CONTAINS InterPro DOMAIN/s: Peptidase S8, subtilisin-related (InterPro:IPR015500); BEST Arabidopsis thaliana protein match is: cobalt ion binding (TAIR:AT3G15000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative RIP1, Description = Plastid developmental protein DAG, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf06913_84097-86489' '(at3g06790 : 131.0) plastid developmental protein DAG, putative; CONTAINS InterPro DOMAIN/s: Peptidase S8, subtilisin-related (InterPro:IPR015500); BEST Arabidopsis thaliana protein match is: cobalt ion binding (TAIR:AT3G15000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative RIP1, Description = Plastid developmental protein DAG, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf06916_246820-251306' '(at2g17040 : 240.0) Member of the NAC transcription factor family and more specifically, the ONAC022 subfamily. Involved in leaf and inflorescence stem morphogenesis.; NAC domain containing protein 36 (NAC036); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 35 (TAIR:AT2G02450.2); Has 2865 Blast hits to 2857 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2863; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 170.0) no description available & (q52qh4|nac68_orysa : 147.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 480.0) & (original description: Putative NAC2, Description = NAC transcription factor, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf06972_58629-79292' '(at2g31340 : 766.0) embryo defective 1381 (emb1381); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1532.0) & (original description: Putative)' T '33.99' 'development.unspecified' 'niben101scf06996_225465-229402' '(at5g59450 : 489.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G46600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67150 : 314.0) no description available & (q69vg1|cigr1_orysa : 204.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (reliability: 978.0) & (original description: Putative SCL11, Description = Scarecrow-like protein 11, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf06998_48183-60534' '(at1g71840 : 455.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Quinoprotein amine dehydrogenase, beta chain-like (InterPro:IPR011044), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 91198 Blast hits to 35247 proteins in 911 species: Archae - 70; Bacteria - 10066; Metazoa - 38021; Fungi - 19388; Plants - 11732; Viruses - 0; Other Eukaryotes - 11921 (source: NCBI BLink). & (gnl|cdd|35517 : 368.0) no description available & (gnl|cdd|29257 : 219.0) no description available & (p93107|pf20_chlre : 100.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 910.0) & (original description: Putative SQT1, Description = Ribosome assembly protein SQT1, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF12894)' T '33.99' 'development.unspecified' 'niben101scf07007_369576-378697' '(at3g15470 : 853.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G54200.1); Has 35932 Blast hits to 22007 proteins in 749 species: Archae - 56; Bacteria - 5680; Metazoa - 13723; Fungi - 7656; Plants - 4267; Viruses - 6; Other Eukaryotes - 4544 (source: NCBI BLink). & (gnl|cdd|35504 : 627.0) no description available & (gnl|cdd|29257 : 127.0) no description available & (reliability: 1590.0) & (original description: Putative At5g54200, Description = Similarity to WD-containing protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf07015_13650-45604' '(at2g33430 : 249.0) differentiation and greening-like 1 (DAL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: plastid organization, endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA); LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT1G32580.1); Has 251 Blast hits to 228 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 251; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q38732|dag_antma : 122.0) DAG protein, chloroplast precursor - Antirrhinum majus (Garden snapdragon) & (reliability: 498.0) & (original description: Putative DAG, Description = Plastid developmental protein DAG, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf07023_53246-56951' '(at5g07050 : 403.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT2G40900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 806.0) & (original description: Putative nlp1, Description = WAT1-related protein, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf07026_1-8012' '(at5g52820 : 802.0) WD-40 repeat family protein / notchless protein, putative; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), NLE (InterPro:IPR012972), WD40 repeat (InterPro:IPR001680), G-protein, beta subunit (InterPro:IPR001632), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35492 : 724.0) no description available & (gnl|cdd|29257 : 241.0) no description available & (p93107|pf20_chlre : 99.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1604.0) & (original description: Putative NLE1, Description = Notchless protein homolog, PFAM = PF08154;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf07070_260140-266538' '(at3g28050 : 385.0) nodulin MtN21 /EamA-like transporter family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G40240.1); Has 1917 Blast hits to 1909 proteins in 293 species: Archae - 12; Bacteria - 576; Metazoa - 4; Fungi - 10; Plants - 1200; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 770.0) & (original description: Putative At3g28050, Description = WAT1-related protein At3g28050, PFAM = PF00892)' T '33.99' 'development.unspecified' 'niben101scf07091_104405-113482' '(at2g27880 : 1085.0) ARGONAUTE 5 (AGO5); FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Argonaute/Dicer protein, PAZ (InterPro:IPR003100); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT1G48410.1); Has 2539 Blast hits to 2399 proteins in 280 species: Archae - 0; Bacteria - 80; Metazoa - 1295; Fungi - 341; Plants - 581; Viruses - 6; Other Eukaryotes - 236 (source: NCBI BLink). & (gnl|cdd|36259 : 786.0) no description available & (gnl|cdd|72942 : 541.0) no description available & (reliability: 2170.0) & (original description: Putative MEL1, Description = Protein argonaute MEL1, PFAM = PF08699;PF16486;PF02170;PF16488;PF02171)' T '33.99' 'development.unspecified' 'niben101scf07096_22575-63930' '(at1g58250 : 2927.0) SABRE, putative gene of unknown function, homologous to maize apt1 gene. Required for normal cell expansion in the root cortex. The sabre mutation results in abnormal cell expansion. Encodes a rare message; very low level of expression was detected in roots and shoots.; SABRE (SAB); CONTAINS InterPro DOMAIN/s: Protein of unknown function FMP27, domain-6, C-terminal (InterPro:IPR019443), Protein of unknown function FMP27, domain-4 (InterPro:IPR019441); BEST Arabidopsis thaliana protein match is: Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain (TAIR:AT5G49680.2). & (gnl|cdd|37121 : 1167.0) no description available & (reliability: 5854.0) & (original description: Putative SAB, Description = Protein SABRE, PFAM = PF10351;PF10347)' T '33.99' 'development.unspecified' 'niben101scf07121_650544-655362' '(at5g06710 : 195.0) Homeobox-leucine zipper protein.; homeobox from Arabidopsis thaliana (HAT14); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT4G17460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35704 : 140.0) no description available & (reliability: 390.0) & (original description: Putative HAT1, Description = Homeobox associated leucine zipper protein, PFAM = PF00046;PF02183)' T '33.99' 'development.unspecified' 'niben101scf07152_343059-402349' '(at5g04410 : 370.0) NAC family member, functions as a transcriptional activator, regulates flavonoid biosynthesis under high light.; NAC domain containing protein 2 (NAC2); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 53 (TAIR:AT3G10500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66085 : 205.0) no description available & (q7gcl7|nac74_orysa : 174.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 740.0) & (original description: Putative NAC078, Description = NAC domain-containing protein 78, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf07162_279260-283579' '(gnl|cdd|70011 : 137.0) no description available & (at3g48140 : 117.0) B12D protein; CONTAINS InterPro DOMAIN/s: B12D (InterPro:IPR010530); BEST Arabidopsis thaliana protein match is: B12D protein (TAIR:AT3G29970.1); Has 143 Blast hits to 143 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative b12D, Description = B12D protein, PFAM = PF06522)' T '33.99' 'development.unspecified' 'niben101scf07169_263480-269159' '(at4g37750 : 395.0) ANT is required for control of cell proliferation and encodes a putative transcriptional regulator similar to AP2. Loss of function alleles have reduced fertility, abnormal ovules and abnormal lateral organs. Expressed specifically in the chalaza and in floral organ primordia.; AINTEGUMENTA (ANT); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G72570.1); Has 7251 Blast hits to 5191 proteins in 264 species: Archae - 0; Bacteria - 9; Metazoa - 18; Fungi - 8; Plants - 7086; Viruses - 4; Other Eukaryotes - 126 (source: NCBI BLink). & (q8l3u3|bbm1_brana : 309.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 93.0) no description available & (reliability: 790.0) & (original description: Putative ANT, Description = AP2-like ethylene-responsive transcription factor ANT, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'niben101scf07182_153251-161437' '(at3g58040 : 462.0) Encodes a RING finger domain containing protein that interacts with AtRAP2.2.; seven in absentia of Arabidopsis 2 (SINAT2); FUNCTIONS IN: protein binding; INVOLVED IN: multicellular organismal development, protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Seven-in-absentia protein, TRAF-like domain (InterPro:IPR018121), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, SIAH-type (InterPro:IPR013010), Seven In Absentia Homolog-type (InterPro:IPR013323), Seven-in-absentia protein, sina (InterPro:IPR004162), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT2G41980.1); Has 1862 Blast hits to 1847 proteins in 701 species: Archae - 0; Bacteria - 0; Metazoa - 1276; Fungi - 4; Plants - 482; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink). & (gnl|cdd|38212 : 294.0) no description available & (gnl|cdd|86255 : 256.0) no description available & (q8t3y0|sinal_drome : 147.0) Probable E3 ubiquitin-protein ligase sina-like CG13030 (EC 6.3.2.-) - Drosophila melanogaster (Fruit fly) & (reliability: 924.0) & (original description: Putative SINAT2, Description = E3 ubiquitin-protein ligase SINAT2, PFAM = PF03145)' T '33.99' 'development.unspecified' 'niben101scf07229_10853-17423' '(at2g19540 : 625.0) Transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: Histone-binding protein RBBP4 (InterPro:IPR022052), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT2G16780.1); Has 21764 Blast hits to 15460 proteins in 558 species: Archae - 2; Bacteria - 1508; Metazoa - 8621; Fungi - 5109; Plants - 3695; Viruses - 0; Other Eukaryotes - 2829 (source: NCBI BLink). & (gnl|cdd|35523 : 491.0) no description available & (gnl|cdd|29257 : 93.1) no description available & (reliability: 1250.0) & (original description: Putative grwd1, Description = Glutamate-rich WD repeat-containing protein 1, PFAM = PF00400;PF00400;PF12265)' T '33.99' 'development.unspecified' 'niben101scf07241_61652-64707' '(at2g46080 : 386.0) CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT1G01550.2); Has 153 Blast hits to 139 proteins in 20 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 150; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 706.0) & (original description: Putative BPS1, Description = Protein BPS1, chloroplastic, PFAM = PF03087)' T '33.99' 'development.unspecified' 'niben101scf07244_407925-411284' '(at2g42840 : 90.5) Encodes a putative extracellular proline-rich protein is exclusively expressed in the L1 layer of vegetative, inflorescence and floral meristems and the protoderm of organ primordia.; protodermal factor 1 (PDF1); Has 74620 Blast hits to 36810 proteins in 1713 species: Archae - 153; Bacteria - 12776; Metazoa - 27126; Fungi - 11565; Plants - 10582; Viruses - 2385; Other Eukaryotes - 10033 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative BnaC04g48550D, Description = BnaC04g48550D protein, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf07250_456312-462025' '(gnl|cdd|70383 : 439.0) no description available & (at2g17840 : 407.0) Identified as drought-inducible gene by differential hybridization. Upregulated by high light, drought, cold and salt stress determined by microarray analysis.; EARLY-RESPONSIVE TO DEHYDRATION 7 (ERD7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, response to high light intensity, response to salt stress, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Senescence/spartin-associated (InterPro:IPR009686); BEST Arabidopsis thaliana protein match is: Senescence/dehydration-associated protein-related (TAIR:AT4G35985.1); Has 250 Blast hits to 250 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 66; Fungi - 39; Plants - 134; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 814.0) & (original description: Putative ERD7, Description = Probable senescence related protein, PFAM = PF06911)' T '33.99' 'development.unspecified' 'niben101scf07323_209954-217028' '(at5g56190 : 577.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G13340.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29257 : 85.0) no description available & (reliability: 1154.0) & (original description: Putative gbp3, Description = Putative WD repeat-containing protein C2A9.03, PFAM = PF00400)' T '33.99' 'development.unspecified' 'niben101scf07339_272703-276071' '(at4g35770 : 154.0) Senescence-associated gene that is strongly induced by phosphate starvation. Transcripts are differentially regulated at the level of mRNA stability at different times of day. mRNAs are targets of the mRNA degradation pathway mediated by the downstream (DST) instability determinant.; SENESCENCE 1 (SEN1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: sulfurtransferase protein 16 (TAIR:AT5G66040.1); Has 257 Blast hits to 257 proteins in 81 species: Archae - 0; Bacteria - 105; Metazoa - 0; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (p27626|din1_rapsa : 150.0) Senescence-associated protein DIN1 - Raphanus sativus (Radish) & (gnl|cdd|36743 : 138.0) no description available & (gnl|cdd|47756 : 83.7) no description available & (reliability: 308.0) & (original description: Putative STR16, Description = Thiosulfate sulfurtransferase 16, chloroplastic, PFAM = PF00581)' T '33.99' 'development.unspecified' 'niben101scf07372_96436-107585' '(at1g61340 : 94.0) F-box family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G21510.1). & (reliability: 188.0) & (original description: Putative)' T '33.99' 'development.unspecified' 'niben101scf07383_345182-352111' '(at1g80350 : 789.0) encodes a p60 katanin protein that is expressed throughout the plant. Required for the specification of cell fates from early in development (in the meristem) through differentiation and for normal postmitotic organization of cortical microtubules into transverse arrays in root epidermis cells. Mutants display cytoskeletal defects.; ECTOPIC ROOT HAIR 3 (ERH3); FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: trichome branching, cortical microtubule organization, multidimensional cell growth, plant-type cell wall biogenesis, microtubule cytoskeleton organization; LOCATED IN: katanin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Vps4 oligomerisation, C-terminal (InterPro:IPR015415); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G34560.1); Has 31677 Blast hits to 29370 proteins in 3124 species: Archae - 1478; Bacteria - 12054; Metazoa - 4742; Fungi - 3292; Plants - 2928; Viruses - 23; Other Eukaryotes - 7160 (source: NCBI BLink). & (gnl|cdd|35957 : 611.0) no description available & (gnl|cdd|30812 : 237.0) no description available & (p54774|cdc48_soybn : 191.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 1578.0) & (original description: Putative AAA1, Description = Katanin p60 ATPase-containing subunit A1, PFAM = PF09336;PF00004)' T '33.99' 'development.unspecified' 'niben101scf07400_195398-216469' '(at2g02560 : 1809.0) Arabidopsis thaliana homolog of human CAND1 (cullin-associated and neddylation-dissociated). Putative similarity to TBP-interacting protein TIP120. Ubiquitously expressed in plant tissues throughout development. T-DNA insertion mutant plants were completely sterile and resistant to sirtinol and auxin, but not to gibberellins or brassinolide. Displayed developmental phenotypes similar to those of axr1, namely, short petioles, downwardly curling leaves, shorter inflorescence. Required for SCF function and appears to modulate SCF complex cycling. Physically interacts with CUL1.; cullin-associated and neddylation dissociated (CAND1); FUNCTIONS IN: binding; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, vegetative to reproductive phase transition of meristem; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), TATA-binding protein interacting (TIP20) (InterPro:IPR013932); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37035 : 1413.0) no description available & (gnl|cdd|72048 : 201.0) no description available & (reliability: 3618.0) & (original description: Putative CAND1, Description = Cullin-associated NEDD8-dissociated protein 1, PFAM = PF08623)' T '33.99' 'development.unspecified' 'niben101scf07474_118613-122047' '(at1g21450 : 582.0) Encodes a scarecrow-like protein (SCL1). Member of GRAS gene family.; SCARECROW-like 1 (SCL1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G48150.2); Has 2480 Blast hits to 2441 proteins in 303 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2475; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 438.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 341.0) no description available & (reliability: 1164.0) & (original description: Putative SCL1, Description = Scarecrow-like protein 1, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf07491_82202-95817' '(at2g17040 : 283.0) Member of the NAC transcription factor family and more specifically, the ONAC022 subfamily. Involved in leaf and inflorescence stem morphogenesis.; NAC domain containing protein 36 (NAC036); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 35 (TAIR:AT2G02450.2); Has 2865 Blast hits to 2857 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2863; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 184.0) no description available & (q7f2l3|nac48_orysa : 158.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (reliability: 566.0) & (original description: Putative NAC6, Description = NAC family transcription factor 6, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf07497_174735-193955' '(at4g07410 : 957.0) Transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT1G27470.1); Has 10654 Blast hits to 6476 proteins in 452 species: Archae - 14; Bacteria - 3757; Metazoa - 2166; Fungi - 2748; Plants - 788; Viruses - 0; Other Eukaryotes - 1181 (source: NCBI BLink). & (gnl|cdd|37259 : 497.0) no description available & (gnl|cdd|29257 : 94.3) no description available & (reliability: 1816.0) & (original description: Putative At1g27470, Description = Putative uncharacterized protein At1g27470, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf07508_285587-288774' '(at5g61430 : 333.0) NAC domain containing protein 100 (NAC100); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 80 (TAIR:AT5G07680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66085 : 211.0) no description available & (q5cd17|nac77_orysa : 205.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 666.0) & (original description: Putative NH18, Description = Nam-like protein 18, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf07549_119712-127640' '(at1g45230 : 228.0) Protein of unknown function (DUF3223); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3223 (InterPro:IPR021602); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3223) (TAIR:AT3G46630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative DCL, Description = Protein DCL, chloroplastic, PFAM = PF11523)' T '33.99' 'development.unspecified' 'niben101scf07564_81847-95210' '(at3g01930 : 777.0) Major facilitator superfamily protein; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G14120.1); Has 2557 Blast hits to 2447 proteins in 764 species: Archae - 24; Bacteria - 1311; Metazoa - 10; Fungi - 268; Plants - 609; Viruses - 0; Other Eukaryotes - 335 (source: NCBI BLink). & (gnl|cdd|70288 : 292.0) no description available & (reliability: 1554.0) & (original description: Putative Sb07g026140, Description = Putative uncharacterized protein Sb07g026140, PFAM = PF06813)' T '33.99' 'development.unspecified' 'niben101scf07576_479278-482333' '(at2g46080 : 383.0) CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT1G01550.2); Has 153 Blast hits to 139 proteins in 20 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 150; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 702.0) & (original description: Putative BPS1, Description = Protein BPS1, chloroplastic, PFAM = PF03087)' T '33.99' 'development.unspecified' 'niben101scf07623_183443-191340' '(gnl|cdd|71337 : 193.0) no description available & (at4g00650 : 151.0) Encodes a major determinant of natural variation in Arabidopsis flowering time. Dominant alleles of FRI confer a vernalization requirement causing plants to overwinter vegetatively. Many early flowering accessions carry loss-of-function fri alleles .Twenty distinct haplotypes that contain non-functional FRI alleles have been identified and the distribution analyzed in over 190 accessions. The common lab strains- Col and Ler each carry loss of function mutations in FRI.; FRIGIDA (FRI); CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT5G48385.1); Has 841 Blast hits to 841 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 841; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative PGSC0003DMG400031150, Description = FRIGIDA, PFAM = PF07899)' T '33.99' 'development.unspecified' 'niben101scf07631_319081-350142' '(at1g22770 : 1519.0) Together with CONSTANTS (CO) and FLOWERING LOCUS T (FT), GIGANTEA promotes flowering under long days in a circadian clock-controlled flowering pathway. GI acts earlier than CO and FT in the pathway by increasing CO and FT mRNA abundance. Located in the nucleus. Regulates several developmental processes, including photoperiod-mediated flowering, phytochrome B signaling, circadian clock, carbohydrate metabolism, and cold stress response. The gene's transcription is controlled by the circadian clock and it is post-transcriptionally regulated by light and dark. Forms a complex with FKF1 on the CO promoter to regulate CO expression.; GIGANTEA (GI); Has 351 Blast hits to 349 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 351; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q9awl7|gigan_orysa : 1447.0) Protein GIGANTEA - Oryza sativa (Rice) & (reliability: 3038.0) & (original description: Putative GI, Description = Protein GIGANTEA, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf07631_319491-327449' '(at1g22770 : 824.0) Together with CONSTANTS (CO) and FLOWERING LOCUS T (FT), GIGANTEA promotes flowering under long days in a circadian clock-controlled flowering pathway. GI acts earlier than CO and FT in the pathway by increasing CO and FT mRNA abundance. Located in the nucleus. Regulates several developmental processes, including photoperiod-mediated flowering, phytochrome B signaling, circadian clock, carbohydrate metabolism, and cold stress response. The gene's transcription is controlled by the circadian clock and it is post-transcriptionally regulated by light and dark. Forms a complex with FKF1 on the CO promoter to regulate CO expression.; GIGANTEA (GI); Has 351 Blast hits to 349 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 351; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q9awl7|gigan_orysa : 793.0) Protein GIGANTEA - Oryza sativa (Rice) & (reliability: 1648.0) & (original description: Putative gib, Description = Gib, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf07663_303606-306670' '(q9xh44|cet1_tobac : 280.0) CEN-like protein 1 - Nicotiana tabacum (Common tobacco) & (at5g62040 : 241.0) PEBP (phosphatidylethanolamine-binding protein) family protein; CONTAINS InterPro DOMAIN/s: Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); BEST Arabidopsis thaliana protein match is: PEBP (phosphatidylethanolamine-binding protein) family protein (TAIR:AT5G03840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38556 : 203.0) no description available & (gnl|cdd|29585 : 181.0) no description available & (reliability: 480.0) & (original description: Putative CET1, Description = CEN-like protein 1, PFAM = PF01161)' T '33.99' 'development.unspecified' 'niben101scf07673_427716-442066' '(at2g43000 : 254.0) NAC domain containing protein 42 (NAC042); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT3G12910.1); Has 2932 Blast hits to 2927 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2932; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 179.0) no description available & (q52qh4|nac68_orysa : 167.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 508.0) & (original description: Putative JUB1, Description = Transcription factor JUNGBRUNNEN 1, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf07764_117475-132581' '(at3g44290 : 252.0) NAC domain containing protein 60 (NAC060); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 89 (TAIR:AT5G22290.1); Has 2819 Blast hits to 2813 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2819; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 185.0) no description available & (q7gcl7|nac74_orysa : 173.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 504.0) & (original description: Putative NAC60, Description = NAC domain-containing protein 60, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf07801_45775-48350' '(at5g43070 : 93.6) WPP family members contains an NE targeting domain. This domain, called the WPP domain after a highly conserved Trp-Pro-Pro motif, is necessary and sufficient for NE targeting of WPP1. RNAi suppression of WPP1 resulted in reduced mitotic activity.; WPP domain protein 1 (WPP1); BEST Arabidopsis thaliana protein match is: WPP domain protein 2 (TAIR:AT1G47200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative MAF1, Description = MFP1 attachment factor 1, PFAM = PF13943)' T '33.99' 'development.unspecified' 'niben101scf07812_138455-153247' '(q43585|ag_tobac : 386.0) Floral homeotic protein AGAMOUS (NAG1) - Nicotiana tabacum (Common tobacco) & (at4g18960 : 285.0) Floral homeotic gene encoding a MADS domain transcription factor. Specifies floral meristem and carpel and stamen identity. Binds CArG box sequences. It is the only C function gene. It interacts genetically with the other homeotic genes to specify the floral organs.; AGAMOUS (AG); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: stamen development, maintenance of floral organ identity, leaf development, carpel development; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT3G58780.3). & (gnl|cdd|29020 : 132.0) no description available & (gnl|cdd|35238 : 93.1) no description available & (reliability: 570.0) & (original description: Putative AG1, Description = Floral homeotic protein AGAMOUS, PFAM = PF00319;PF01486)' T '33.99' 'development.unspecified' 'niben101scf07850_886140-888478' '(at5g22380 : 128.0) NAC domain containing protein 90 (NAC090); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 61 (TAIR:AT3G44350.2); Has 2731 Blast hits to 2726 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2731; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 87.3) no description available & (reliability: 256.0) & (original description: Putative TERN, Description = NAC domain-containing protein 90, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf07883_706532-709461' '(at3g15030 : 140.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 112.0) no description available & (reliability: 272.0) & (original description: Putative cyc2c, Description = Transcription factor PCF8, PFAM = PF03634)' T '33.99' 'development.unspecified' 'niben101scf07937_279872-291299' '(at2g27040 : 1393.0) AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens.; ARGONAUTE 4 (AGO4); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Argonaute family protein (TAIR:AT5G21150.1). & (gnl|cdd|36259 : 756.0) no description available & (gnl|cdd|72942 : 464.0) no description available & (reliability: 2554.0) & (original description: Putative AGO8, Description = Protein argonaute 8, PFAM = PF16486;PF02170;PF02171;PF16487;PF16488;PF08699)' T '33.99' 'development.unspecified' 'niben101scf07965_284980-288509' '(q9xhl7|tctp_tobac : 267.0) Translationally-controlled tumor protein homolog (TCTP) - Nicotiana tabacum (Common tobacco) & (at3g16640 : 216.0) Encodes a protein homologous to translationally controlled tumor protein (TCTP) from Drosophila. In flies, TCTP functions guanine nucleotide exchange factor in the TOR signaling pathway. TCTP is expressed throughout the plant with highest levels seen in meristematic regions of the shoot and root. Loss of function alleles are not transmitted through the male gametophyte due to defects in pollen tube growth. Hypomorphs, generated through RNAi, are dwarf and have smaller cells. These plants also have defects in lateral and primary root growth as well as root hair growth. The phenotypes are similar to TOR mutants suggesting that TCTP functions in the is pathway in Arabidopsis as well.; translationally controlled tumor protein (TCTP); INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Translationally controlled tumour protein (InterPro:IPR018105), Mss4/translationally controlled tumour-associated TCTP (InterPro:IPR011323), Translationally controlled tumour protein, conserved site (InterPro:IPR018103), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: Methionine sulfoxide reductase (MSS4-like) family protein (TAIR:AT3G05540.1); Has 867 Blast hits to 867 proteins in 310 species: Archae - 0; Bacteria - 0; Metazoa - 452; Fungi - 160; Plants - 158; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|85059 : 197.0) no description available & (gnl|cdd|36938 : 183.0) no description available & (reliability: 432.0) & (original description: Putative TCTP, Description = Translationally-controlled tumor protein homolog, PFAM = PF00838)' T '33.99' 'development.unspecified' 'niben101scf07974_385018-399462' '(at4g32551 : 811.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (gnl|cdd|35487 : 220.0) no description available & (gnl|cdd|29257 : 214.0) no description available & (reliability: 1622.0) & (original description: Putative LUH, Description = Transcriptional corepressor LEUNIG_HOMOLOG, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF08513)' T '33.99' 'development.unspecified' 'niben101scf08020_650930-653616' '(at2g35980 : 190.0) Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus, spermine and during senescence. The gene product is localized to the chloroplast.; YELLOW-LEAF-SPECIFIC GENE 9 (YLS9); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response to virus, leaf senescence, response to other organism; LOCATED IN: chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: NDR1/HIN1-like 2 (TAIR:AT3G11650.1); Has 1046 Blast hits to 1046 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1046; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 159.0) no description available & (reliability: 380.0) & (original description: Putative hin1, Description = Harpin inducing protein, PFAM = PF03168)' T '33.99' 'development.unspecified' 'niben101scf08034_56743-59294' '(at3g52525 : 88.6) ovate family protein 6 (OFP6); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: Ovate family protein (TAIR:AT2G36026.1); Has 453 Blast hits to 451 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 453; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative OFP6, Description = AtOFP6, PFAM = PF04844)' T '33.99' 'development.unspecified' 'niben101scf08137_37058-52564' '(at4g27760 : 558.0) Encodes an oxidoreductase required for vegetative shoot apex development. Mutants display disruptions in leaf positioning and meristem maintenance.; FOREVER YOUNG (FEY); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: multicellular organismal development, meristem maintenance; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G53090.1); Has 74609 Blast hits to 74569 proteins in 3131 species: Archae - 650; Bacteria - 51148; Metazoa - 4951; Fungi - 3783; Plants - 2113; Viruses - 0; Other Eukaryotes - 11964 (source: NCBI BLink). & (gnl|cdd|36422 : 273.0) no description available & (gnl|cdd|81882 : 155.0) no description available & (q9sdt1|por_dauca : 85.5) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Daucus carota (Carrot) & (reliability: 1116.0) & (original description: Putative FEY, Description = Oxidoreductase FEY3, PFAM = PF00106;PF00106)' T '33.99' 'development.unspecified' 'niben101scf08142_389332-392600' '(at3g15030 : 234.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 117.0) no description available & (reliability: 436.0) & (original description: Putative TCP4, Description = Transcription factor TCP4, PFAM = PF03634)' T '33.99' 'development.unspecified' 'niben101scf08208_203694-219562' '(at2g34780 : 150.0) Encodes a novel protein of unknown function that is essential for embryonic development. Severe loss of function alleles are embryo lethal. Analysis of a partial loss of function allele indicates a role for EMB1611 in regulation of endoreduplication and maintenance of meristem cell fate. It appears to be required for maintaining the CLV-WUS regulatory pathway.; MATERNAL EFFECT EMBRYO ARREST 22 (MEE22); INVOLVED IN: negative regulation of DNA endoreduplication, meristem structural organization, embryo development ending in seed dormancy, maintenance of meristem identity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 300.0) & (original description: Putative , Description = Putative nucleoprotein TPR-like, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf08293_253364-263739' '(p49030|mgn_orysa : 281.0) Protein mago nashi homolog (Mago nashi-like protein) - Oryza sativa (Rice) & (at1g02140 : 270.0) MAGO NASHI (MAGO); FUNCTIONS IN: protein binding; INVOLVED IN: pollen tube guidance, sex determination, embryo development ending in seed dormancy; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mago nashi protein (InterPro:IPR004023); Has 476 Blast hits to 476 proteins in 200 species: Archae - 0; Bacteria - 0; Metazoa - 223; Fungi - 96; Plants - 76; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|38602 : 267.0) no description available & (gnl|cdd|66475 : 261.0) no description available & (reliability: 540.0) & (original description: Putative mago, Description = Protein mago nashi, PFAM = PF02792)' T '33.99' 'development.unspecified' 'niben101scf08330_49925-76047' '(at5g51230 : 645.0) Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Forms a complex with FIE, CLF, and MSI1. This complex modulates the expression of target genes including AG, PI and AP3.; EMBRYONIC FLOWER 2 (EMF2); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Polycomb protein, VEFS-Box (InterPro:IPR019135); BEST Arabidopsis thaliana protein match is: VEFS-Box of polycomb protein (TAIR:AT4G16845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37561 : 225.0) no description available & (reliability: 1290.0) & (original description: Putative EMF2, Description = Polycomb group protein EMBRYONIC FLOWER 2, PFAM = PF09733)' T '33.99' 'development.unspecified' 'niben101scf08357_488003-496857' '(at1g13980 : 1766.0) Encodes a GDP/GTP exchange factor for small G-proteins of the ADP ribosylation factor (RAF) class, and as regulator of intracellular trafficking. Homologous to Sec7p and YEC2 from yeast. Involved in the specification of apical-basal pattern formation. Essential for cell division, expansion and adhesion. It appears that heteotypic binding between the DCB and C-terminal domains of two GNOM proteins is required for membrane association, however, GNOM appears to exist predominantly as a heterodimer formed through DCB-DCB interactions.; GNOM (GN); FUNCTIONS IN: protein homodimerization activity, GTP:GDP antiporter activity; INVOLVED IN: in 13 processes; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904); BEST Arabidopsis thaliana protein match is: GNOM-like 1 (TAIR:AT5G39500.1). & (gnl|cdd|36146 : 1382.0) no description available & (gnl|cdd|65184 : 257.0) no description available & (reliability: 3532.0) & (original description: Putative NaGNL1, Description = Predicted GNOM-like protein ortholog, PFAM = PF01369;PF12783)' T '33.99' 'development.unspecified' 'niben101scf08368_571714-640609' '(gnl|cdd|68610 : 250.0) no description available & (at1g70680 : 230.0) Caleosin-related family protein; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: Caleosin-related family protein (TAIR:AT1G70670.1); Has 342 Blast hits to 337 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 281; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative PXG5, Description = Probable peroxygenase 5, PFAM = PF05042)' T '33.99' 'development.unspecified' 'niben101scf08368_617692-663536' '(gnl|cdd|68610 : 249.0) no description available & (at1g70680 : 230.0) Caleosin-related family protein; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: Caleosin-related family protein (TAIR:AT1G70670.1); Has 342 Blast hits to 337 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 281; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative PXG5, Description = Probable peroxygenase 5, PFAM = PF05042)' T '33.99' 'development.unspecified' 'niben101scf08391_32268-42349' '(at2g43500 : 724.0) Plant regulator RWP-RK family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT3G59580.2); Has 665 Blast hits to 521 proteins in 81 species: Archae - 0; Bacteria - 147; Metazoa - 3; Fungi - 2; Plants - 476; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|65798 : 88.2) no description available & (reliability: 1396.0) & (original description: Putative NLP9, Description = Protein NLP9, PFAM = PF02042;PF00564)' T '33.99' 'development.unspecified' 'niben101scf08391_50695-89834' '(at2g03060 : 150.0) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL30 is expressed in pollen.It forms heterodimers with other MICK family members.; AGAMOUS-like 30 (AGL30); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: pollen development; LOCATED IN: nucleus; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 65 (TAIR:AT1G18750.1); Has 6155 Blast hits to 6155 proteins in 757 species: Archae - 0; Bacteria - 0; Metazoa - 616; Fungi - 313; Plants - 5146; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative Mads1, Description = MADS box protein, PFAM = PF00319)' T '33.99' 'development.unspecified' 'niben101scf08465_12281-20696' '(at1g66330 : 374.0) senescence-associated family protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 748.0) & (original description: Putative T27F4.8, Description = Putative senescence-associated protein, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf08473_33364-36651' '(at2g22800 : 217.0) Encodes homeobox protein HAT9.; HAT9; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein family (TAIR:AT4G37790.1); Has 6755 Blast hits to 6732 proteins in 464 species: Archae - 0; Bacteria - 0; Metazoa - 4333; Fungi - 266; Plants - 2037; Viruses - 7; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|35704 : 135.0) no description available & (reliability: 432.0) & (original description: Putative HAT9, Description = Homeobox-leucine zipper protein HAT9, PFAM = PF00046;PF02183)' T '33.99' 'development.unspecified' 'niben101scf08526_386323-391478' '(at1g34190 : 355.0) NAC domain containing protein 17 (NAC017); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 16 (TAIR:AT1G34180.1); Has 2927 Blast hits to 2911 proteins in 78 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2919; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|66085 : 206.0) no description available & (q7gcl7|nac74_orysa : 162.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 710.0) & (original description: Putative NAC017, Description = NAC domain-containing protein 17, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf08533_725981-732464' '(at3g12090 : 326.0) Member of TETRASPANIN family; tetraspanin6 (TET6); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499); BEST Arabidopsis thaliana protein match is: tetraspanin5 (TAIR:AT4G23410.1); Has 433 Blast hits to 431 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 429; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|84702 : 96.2) no description available & (reliability: 652.0) & (original description: Putative TET6, Description = Tetraspanin-6, PFAM = PF00335)' T '33.99' 'development.unspecified' 'niben101scf08535_214966-219693' '(at3g13960 : 164.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.; growth-regulating factor 5 (GRF5); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 2351 Blast hits to 1483 proteins in 168 species: Archae - 0; Bacteria - 108; Metazoa - 567; Fungi - 216; Plants - 548; Viruses - 4; Other Eukaryotes - 908 (source: NCBI BLink). & (gnl|cdd|72299 : 83.8) no description available & (reliability: 300.0) & (original description: Putative GRF1, Description = Glutamine-Leucine-Glutamine, QLQ, PFAM = PF08880;PF08879)' T '33.99' 'development.unspecified' 'niben101scf08566_388147-416376' '(at4g36860 : 195.0) LIM domain-containing protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Ubiquitin interacting motif (InterPro:IPR003903), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: DA1 (TAIR:AT1G19270.1); Has 6004 Blast hits to 4271 proteins in 323 species: Archae - 7; Bacteria - 228; Metazoa - 4096; Fungi - 190; Plants - 320; Viruses - 67; Other Eukaryotes - 1096 (source: NCBI BLink). & (gnl|cdd|36916 : 80.7) no description available & (reliability: 390.0) & (original description: Putative , Description = , PFAM = PF12315)' T '33.99' 'development.unspecified' 'niben101scf08566_409040-411809' '(at1g19270 : 106.0) DA1 (DA1); CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Ubiquitin interacting motif (InterPro:IPR003903), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: LIM domain-containing protein (TAIR:AT4G36860.1); Has 3538 Blast hits to 2617 proteins in 167 species: Archae - 0; Bacteria - 18; Metazoa - 3009; Fungi - 63; Plants - 177; Viruses - 0; Other Eukaryotes - 271 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative , Description = , PFAM = PF12315)' T '33.99' 'development.unspecified' 'niben101scf08597_263935-278913' '(at2g32950 : 1050.0) Represses photomorphogenesis and induces skotomorphogenesis in the dark. Contains a ring finger zinc-binding motif, a coiled-coil domain, and several WD-40 repeats, similar to G-beta proteins. The C-terminus has homology to TAFII80, a subunit of the TFIID component of the RNA polymerase II of Drosophila. Nuclear localization in the dark and cytoplasmic in the light.; CONSTITUTIVE PHOTOMORPHOGENIC 1 (COP1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA1-related 2 (TAIR:AT4G11110.1); Has 42218 Blast hits to 27649 proteins in 756 species: Archae - 30; Bacteria - 4454; Metazoa - 17716; Fungi - 8958; Plants - 5306; Viruses - 46; Other Eukaryotes - 5708 (source: NCBI BLink). & (p93471|cop1_pea : 1005.0) E3 ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive photomorphogenesis protein 1) - Pisum sativum (Garden pea) & (gnl|cdd|29257 : 134.0) no description available & (gnl|cdd|35485 : 100.0) no description available & (reliability: 2100.0) & (original description: Putative COP1, Description = E3 ubiquitin-protein ligase COP1, PFAM = PF00400;PF00400;PF13923)' T '33.99' 'development.unspecified' 'niben101scf08643_90936-101337' '(at3g44530 : 1263.0) Encodes a nuclear localized WD-repeat containing protein involved in negative regulation of knox gene expression via epigenetic mechanism of chromatin re-organization. Interacts physically and genetically with AS1. Expressed in meristem and leaf primordia. Homozygous mutants are embryo lethal. Phenotype of cosuppressed lines is variable but show effects on leaf development similar to as1/as2.; homolog of histone chaperone HIRA (HIRA); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), TUP1-like enhancer of split (InterPro:IPR011494), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G64630.2). & (gnl|cdd|36191 : 652.0) no description available & (gnl|cdd|87311 : 182.0) no description available & (p93107|pf20_chlre : 93.6) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 2526.0) & (original description: Putative ssm, Description = Protein HIRA, PFAM = PF00400;PF00400;PF00400;PF00400;PF07569)' T '33.99' 'development.unspecified' 'niben101scf08651_187895-190971' '(at5g20700 : 131.0) Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT1G74940.1); Has 476 Blast hits to 476 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 476; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68153 : 84.2) no description available & (reliability: 262.0) & (original description: Putative PGSC0003DMG400025721, Description = Ethphon-induced protein, PFAM = PF04570)' T '33.99' 'development.unspecified' 'niben101scf08653_249827-266281' '(at3g18200 : 437.0) nodulin MtN21 /EamA-like transporter family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: Walls Are Thin 1 (TAIR:AT1G75500.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35917 : 144.0) no description available & (gnl|cdd|29062 : 140.0) no description available & (reliability: 874.0) & (original description: Putative nlp1, Description = WAT1-related protein, PFAM = PF00481;PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf08690_272209-278579' '(at3g61790 : 536.0) Protein with RING/U-box and TRAF-like domains; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: multicellular organismal development, ubiquitin-dependent protein catabolic process, protein ubiquitination; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Seven-in-absentia protein, TRAF-like domain (InterPro:IPR018121), Zinc finger, SIAH-type (InterPro:IPR013010), Zinc finger, RING-type (InterPro:IPR001841), Seven In Absentia Homolog-type (InterPro:IPR013323), Seven-in-absentia protein, sina (InterPro:IPR004162), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT4G27880.1); Has 1836 Blast hits to 1817 proteins in 706 species: Archae - 0; Bacteria - 0; Metazoa - 1264; Fungi - 11; Plants - 486; Viruses - 2; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|38212 : 310.0) no description available & (gnl|cdd|86255 : 277.0) no description available & (q8t3y0|sinal_drome : 143.0) Probable E3 ubiquitin-protein ligase sina-like CG13030 (EC 6.3.2.-) - Drosophila melanogaster (Fruit fly) & (reliability: 1072.0) & (original description: Putative SINAT2, Description = E3 ubiquitin-protein ligase SINAT2, PFAM = PF03145)' T '33.99' 'development.unspecified' 'niben101scf08702_233581-238355' '(at1g65480 : 275.0) FT, together with LFY, promotes flowering and is antagonistic with its homologous gene, TERMINAL FLOWER1 (TFL1). FT is expressed in leaves and is induced by long day treatment. Either the FT mRNA or protein is translocated to the shoot apex where it induces its own expression. Recent data suggests that FT protein acts as a long-range signal. FT is a target of CO and acts upstream of SOC1.; FLOWERING LOCUS T (FT); FUNCTIONS IN: phosphatidylethanolamine binding, protein binding; INVOLVED IN: photoperiodism, flowering, positive regulation of flower development, regulation of flower development; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); BEST Arabidopsis thaliana protein match is: PEBP (phosphatidylethanolamine-binding protein) family protein (TAIR:AT4G20370.1); Has 2182 Blast hits to 2182 proteins in 306 species: Archae - 0; Bacteria - 0; Metazoa - 594; Fungi - 140; Plants - 1404; Viruses - 3; Other Eukaryotes - 41 (source: NCBI BLink). & (q9xh43|cet2_tobac : 195.0) CEN-like protein 2 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|38556 : 191.0) no description available & (gnl|cdd|29585 : 171.0) no description available & (reliability: 550.0) & (original description: Putative HD3A, Description = Protein HEADING DATE 3A, PFAM = PF01161)' T '33.99' 'development.unspecified' 'niben101scf08773_7944-16837' '(at1g48635 : 392.0) peroxin 3 (PEX3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: peroxisome organization; LOCATED IN: mitochondrion, peroxisome, integral to peroxisomal membrane; CONTAINS InterPro DOMAIN/s: Peroxin-3 (InterPro:IPR006966); BEST Arabidopsis thaliana protein match is: peroxin 3-1 (TAIR:AT3G18160.1); Has 293 Blast hits to 293 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 111; Plants - 49; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|39645 : 229.0) no description available & (gnl|cdd|68456 : 105.0) no description available & (reliability: 742.0) & (original description: Putative PEX3, Description = Peroxisome biogenesis protein 3-2, PFAM = PF04882)' T '33.99' 'development.unspecified' 'niben101scf08811_2054-5298' '(at5g48150 : 612.0) Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway.; phytochrome a signal transduction 1 (PAT1); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 21 (TAIR:AT2G04890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 588.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (gnl|cdd|67150 : 351.0) no description available & (reliability: 1172.0) & (original description: Putative CIGR2, Description = Chitin-inducible gibberellin-responsive protein 2, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf08936_216539-252235' '(at3g48740 : 245.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: homolog of Medicago truncatula MTN3 (TAIR:AT5G23660.1); Has 1006 Blast hits to 953 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 236; Fungi - 0; Plants - 627; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|36836 : 224.0) no description available & (gnl|cdd|86234 : 91.3) no description available & (reliability: 490.0) & (original description: Putative SWEET12, Description = Bidirectional sugar transporter SWEET12, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf08936_323444-327501' '(at3g48740 : 250.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: homolog of Medicago truncatula MTN3 (TAIR:AT5G23660.1); Has 1006 Blast hits to 953 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 236; Fungi - 0; Plants - 627; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|36836 : 224.0) no description available & (gnl|cdd|86234 : 90.2) no description available & (reliability: 500.0) & (original description: Putative SWEET10, Description = Bidirectional sugar transporter SWEET10, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf08995_163213-171791' '(at2g41720 : 1087.0) EMBRYO DEFECTIVE 2654 (EMB2654); INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q76c99|rf1_orysa : 227.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2174.0) & (original description: Putative EMB2654, Description = Pentatricopeptide repeat-containing protein At2g41720, PFAM = PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF13041;PF13812;PF13812;PF13812)' T '33.99' 'development.unspecified' 'niben101scf08998_16061-18495' '(at4g17670 : 85.1) Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT5G47060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative dl4870c, Description = BnaC07g19900D protein, PFAM = PF04570)' T '33.99' 'development.unspecified' 'niben101scf09011_112003-130263' '(at5g65380 : 554.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, ripening, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G44050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36561 : 440.0) no description available & (gnl|cdd|30880 : 170.0) no description available & (reliability: 1108.0) & (original description: Putative DTX27, Description = Protein DETOXIFICATION 27, PFAM = PF01554;PF01554)' T '33.99' 'development.unspecified' 'niben101scf09030_82957-88609' '(at2g22870 : 377.0) embryo defective 2001 (EMB2001); FUNCTIONS IN: GTP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein, HSR1-related (InterPro:IPR002917), GTP-binding protein, ribosome biogenesis, YsxC (InterPro:IPR019987); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G11480.1); Has 7972 Blast hits to 7922 proteins in 2512 species: Archae - 103; Bacteria - 5806; Metazoa - 98; Fungi - 230; Plants - 215; Viruses - 0; Other Eukaryotes - 1520 (source: NCBI BLink). & (gnl|cdd|37697 : 253.0) no description available & (gnl|cdd|80677 : 208.0) no description available & (reliability: 754.0) & (original description: Putative engB, Description = Probable GTP-binding protein EngB, PFAM = PF01926)' T '33.99' 'development.unspecified' 'niben101scf09079_161145-164915' '(at2g23810 : 342.0) Member of TETRASPANIN family; tetraspanin8 (TET8); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, conserved site (InterPro:IPR018503), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: tetraspanin9 (TAIR:AT4G30430.1); Has 603 Blast hits to 600 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 0; Plants - 433; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|84702 : 106.0) no description available & (reliability: 684.0) & (original description: Putative TET8, Description = Tetraspanin-8, PFAM = PF00335)' T '33.99' 'development.unspecified' 'niben101scf09101_558798-564423' '(at2g30300 : 377.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, sperm cell; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G01630.1); Has 1130 Blast hits to 1113 proteins in 261 species: Archae - 8; Bacteria - 316; Metazoa - 4; Fungi - 113; Plants - 577; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|70288 : 237.0) no description available & (reliability: 754.0) & (original description: Putative Os05g0475700, Description = Os05g0475700 protein, PFAM = PF06813)' T '33.99' 'development.unspecified' 'niben101scf09116_242536-252211' '(at2g33430 : 292.0) differentiation and greening-like 1 (DAL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: plastid organization, endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA); LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT1G32580.1); Has 251 Blast hits to 228 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 251; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q38732|dag_antma : 132.0) DAG protein, chloroplast precursor - Antirrhinum majus (Garden snapdragon) & (reliability: 584.0) & (original description: Putative DAG, Description = Plastid developmental protein DAG, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf09141_120096-141491' '(at3g08850 : 1830.0) Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive.; RAPTOR1; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), WD40 repeat (InterPro:IPR001680), Regulatory associated protein of TOR (InterPro:IPR004083), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: HEAT repeat ;WD domain, G-beta repeat protein protein (TAIR:AT5G01770.1); Has 7799 Blast hits to 6065 proteins in 379 species: Archae - 2; Bacteria - 1590; Metazoa - 2741; Fungi - 1618; Plants - 862; Viruses - 0; Other Eukaryotes - 986 (source: NCBI BLink). & (gnl|cdd|36730 : 1539.0) no description available & (gnl|cdd|29257 : 89.3) no description available & (reliability: 3660.0) & (original description: Putative mip1, Description = Regulatory-associated protein of mTOR, PFAM = PF14538;PF00400)' T '33.99' 'development.unspecified' 'niben101scf09141_120114-136721' '(at3g08850 : 1555.0) Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive.; RAPTOR1; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), WD40 repeat (InterPro:IPR001680), Regulatory associated protein of TOR (InterPro:IPR004083), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: HEAT repeat ;WD domain, G-beta repeat protein protein (TAIR:AT5G01770.1); Has 7799 Blast hits to 6065 proteins in 379 species: Archae - 2; Bacteria - 1590; Metazoa - 2741; Fungi - 1618; Plants - 862; Viruses - 0; Other Eukaryotes - 986 (source: NCBI BLink). & (gnl|cdd|36730 : 1331.0) no description available & (reliability: 3110.0) & (original description: Putative mip1, Description = Regulatory-associated protein of mTOR, PFAM = PF14538)' T '33.99' 'development.unspecified' 'niben101scf09141_121422-139593' '(at3g08850 : 1536.0) Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive.; RAPTOR1; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), WD40 repeat (InterPro:IPR001680), Regulatory associated protein of TOR (InterPro:IPR004083), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: HEAT repeat ;WD domain, G-beta repeat protein protein (TAIR:AT5G01770.1); Has 7799 Blast hits to 6065 proteins in 379 species: Archae - 2; Bacteria - 1590; Metazoa - 2741; Fungi - 1618; Plants - 862; Viruses - 0; Other Eukaryotes - 986 (source: NCBI BLink). & (gnl|cdd|36730 : 1341.0) no description available & (reliability: 3072.0) & (original description: Putative mip1, Description = Regulatory-associated protein of mTOR, PFAM = PF14538)' T '33.99' 'development.unspecified' 'niben101scf09197_28150-34186' '(at3g30340 : 345.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT4G01440.1); Has 4418 Blast hits to 4395 proteins in 666 species: Archae - 30; Bacteria - 2090; Metazoa - 4; Fungi - 0; Plants - 1238; Viruses - 0; Other Eukaryotes - 1056 (source: NCBI BLink). & (reliability: 690.0) & (original description: Putative At3g30340, Description = WAT1-related protein At3g30340, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf09232_74226-77251' '(at1g06920 : 93.2) ovate family protein 4 (OFP4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 2 (TAIR:AT2G30400.1); Has 524 Blast hits to 514 proteins in 51 species: Archae - 0; Bacteria - 6; Metazoa - 52; Fungi - 2; Plants - 429; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|68419 : 87.2) no description available & (reliability: 186.4) & (original description: Putative OFP1, Description = Ovate family protein 1, PFAM = PF13724;PF04844)' T '33.99' 'development.unspecified' 'niben101scf09264_1548-12704' '(at5g22330 : 784.0) RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1 (RIN1); FUNCTIONS IN: protein binding; INVOLVED IN: meristem development, regulation of defense response to fungus, incompatible interaction; LOCATED IN: nucleolus, nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TIP49, C-terminal (InterPro:IPR010339), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G49830.1); Has 3940 Blast hits to 3882 proteins in 1253 species: Archae - 399; Bacteria - 2038; Metazoa - 370; Fungi - 432; Plants - 137; Viruses - 0; Other Eukaryotes - 564 (source: NCBI BLink). & (gnl|cdd|37153 : 741.0) no description available & (gnl|cdd|31417 : 573.0) no description available & (reliability: 1568.0) & (original description: Putative ruvbl1, Description = RuvB-like helicase, PFAM = PF06068)' T '33.99' 'development.unspecified' 'niben101scf09264_2187-6529' '(gnl|cdd|37153 : 365.0) no description available & (at5g22330 : 363.0) RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1 (RIN1); FUNCTIONS IN: protein binding; INVOLVED IN: meristem development, regulation of defense response to fungus, incompatible interaction; LOCATED IN: nucleolus, nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TIP49, C-terminal (InterPro:IPR010339), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G49830.1); Has 3940 Blast hits to 3882 proteins in 1253 species: Archae - 399; Bacteria - 2038; Metazoa - 370; Fungi - 432; Plants - 137; Viruses - 0; Other Eukaryotes - 564 (source: NCBI BLink). & (gnl|cdd|31417 : 281.0) no description available & (reliability: 726.0) & (original description: Putative pont, Description = RuvB-like helicase, PFAM = PF06068)' T '33.99' 'development.unspecified' 'niben101scf09264_3549-12351' '(at5g22330 : 527.0) RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1 (RIN1); FUNCTIONS IN: protein binding; INVOLVED IN: meristem development, regulation of defense response to fungus, incompatible interaction; LOCATED IN: nucleolus, nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TIP49, C-terminal (InterPro:IPR010339), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G49830.1); Has 3940 Blast hits to 3882 proteins in 1253 species: Archae - 399; Bacteria - 2038; Metazoa - 370; Fungi - 432; Plants - 137; Viruses - 0; Other Eukaryotes - 564 (source: NCBI BLink). & (gnl|cdd|37153 : 514.0) no description available & (gnl|cdd|87013 : 397.0) no description available & (reliability: 1054.0) & (original description: Putative RUVBL1, Description = RuvB-like helicase, PFAM = PF06068)' T '33.99' 'development.unspecified' 'niben101scf09414_36486-42401' '(gnl|cdd|85621 : 672.0) no description available & (q40505|fl2_tobac : 594.0) Floricaula/leafy homolog 2 (NFL2) - Nicotiana tabacum (Common tobacco) & (at5g61850 : 326.0) Encodes transcriptional regulator that promotes the transition to flowering.Involved in floral meristem development. LFY is involved in the regulation of AP3 expression, and appears to bring the F-box protein UFO to the AP3 promoter.; LEAFY (LFY); CONTAINS InterPro DOMAIN/s: Floricaula/leafy protein (InterPro:IPR002910); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 652.0) & (original description: Putative FL2, Description = Floricaula/leafy homolog 2, PFAM = PF01698;PF17538)' T '33.99' 'development.unspecified' 'niben101scf09424_363998-368680' '(at1g75900 : 363.0) GDSL-like Lipase/Acylhydrolase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT1G75880.2); Has 3444 Blast hits to 3405 proteins in 204 species: Archae - 0; Bacteria - 282; Metazoa - 0; Fungi - 26; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|58514 : 342.0) no description available & (p40603|apg_brana : 235.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 726.0) & (original description: Putative EXL1, Description = GDSL esterase/lipase EXL3, PFAM = PF00657)' T '33.99' 'development.unspecified' 'niben101scf09455_135268-147340' '(at2g37330 : 383.0) Encodes an ABC transporter-like protein, without an ATPase domain, required for aluminum (Al) resistance/tolerance and may function to redistribute accumulated Al away from sensitive tissues in order to protect the growing root from the toxic effects of Al.; ALUMINUM SENSITIVE 3 (ALS3); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00245 (InterPro:IPR005226); Has 1906 Blast hits to 1906 proteins in 934 species: Archae - 39; Bacteria - 1722; Metazoa - 0; Fungi - 12; Plants - 43; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (gnl|cdd|30739 : 182.0) no description available & (reliability: 766.0) & (original description: Putative ALS3, Description = Protein ALUMINUM SENSITIVE 3, PFAM = PF03649)' T '33.99' 'development.unspecified' 'niben101scf09523_273516-277291' '(at2g42840 : 149.0) Encodes a putative extracellular proline-rich protein is exclusively expressed in the L1 layer of vegetative, inflorescence and floral meristems and the protoderm of organ primordia.; protodermal factor 1 (PDF1); Has 74620 Blast hits to 36810 proteins in 1713 species: Archae - 153; Bacteria - 12776; Metazoa - 27126; Fungi - 11565; Plants - 10582; Viruses - 2385; Other Eukaryotes - 10033 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative BnaC04g48550D, Description = BnaC04g48550D protein, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf09535_95339-112495' '(at1g80350 : 485.0) encodes a p60 katanin protein that is expressed throughout the plant. Required for the specification of cell fates from early in development (in the meristem) through differentiation and for normal postmitotic organization of cortical microtubules into transverse arrays in root epidermis cells. Mutants display cytoskeletal defects.; ECTOPIC ROOT HAIR 3 (ERH3); FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: trichome branching, cortical microtubule organization, multidimensional cell growth, plant-type cell wall biogenesis, microtubule cytoskeleton organization; LOCATED IN: katanin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Vps4 oligomerisation, C-terminal (InterPro:IPR015415); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G34560.1); Has 31677 Blast hits to 29370 proteins in 3124 species: Archae - 1478; Bacteria - 12054; Metazoa - 4742; Fungi - 3292; Plants - 2928; Viruses - 23; Other Eukaryotes - 7160 (source: NCBI BLink). & (gnl|cdd|35957 : 470.0) no description available & (gnl|cdd|30812 : 248.0) no description available & (q96372|cdc48_capan : 194.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 970.0) & (original description: Putative KATL1, Description = Katanin p60 ATPase-containing subunit A-like 1, PFAM = PF00004;PF09336)' T '33.99' 'development.unspecified' 'niben101scf09555_182704-190392' '(at4g12420 : 900.0) Encodes a protein of unknown function involved in directed root tip growth. It is a member of 19-member gene family and is distantly related structurally to the multiple-copper oxidases ascorbate oxidase and laccase, though it lacks the copper-binding domains. The protein is glycosylated and GPI-anchored. It is localized to the plasma membrane and the cell wall. The gene is expressed most strongly in expanding tissues.; SKU5; FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: cell tip growth; LOCATED IN: plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 2 (TAIR:AT5G51480.1). & (gnl|cdd|36477 : 573.0) no description available & (q00624|aso_brana : 491.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 146.0) no description available & (reliability: 1800.0) & (original description: Putative sks3, Description = Multicopper oxidase, putative, PFAM = PF00394;PF07732;PF07731)' T '33.99' 'development.unspecified' 'niben101scf09555_239811-244806' '(at2g45190 : 206.0) Encodes a member of the YABBY family of transcriptional regulators that is involved in abaxial cell type specification in leaves and fruits. YAB1 acts in a non-cell autonomous fashion within the meristem to affect phyllotactic patterning. The non-autonomous effect on the central region of the meristem is mediated through the activity if Lateral Suppressor (LAS).; ABNORMAL FLORAL ORGANS (AFO); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT4G00180.1); Has 454 Blast hits to 452 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 436; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|68268 : 195.0) no description available & (q7xim7|yab1_orysa : 134.0) Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice) & (reliability: 412.0) & (original description: Putative YAB1, Description = Axial regulator YABBY 1, PFAM = PF04690)' T '33.99' 'development.unspecified' 'niben101scf09555_488342-492427' '(at1g12260 : 355.0) Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.; NAC 007 (NAC007); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: Arabidopsis NAC domain containing protein 26 (TAIR:AT1G62700.1); Has 3158 Blast hits to 3153 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 2; Plants - 3027; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (q5z6b6|nac76_orysa : 239.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (gnl|cdd|66085 : 214.0) no description available & (reliability: 710.0) & (original description: Putative NAC007, Description = NAC domain-containing protein 7, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf09596_36196-40231' '(at2g37460 : 447.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT2G37450.2); Has 3094 Blast hits to 3077 proteins in 704 species: Archae - 42; Bacteria - 1467; Metazoa - 3; Fungi - 4; Plants - 1230; Viruses - 0; Other Eukaryotes - 348 (source: NCBI BLink). & (reliability: 894.0) & (original description: Putative nlp1, Description = WAT1-related protein, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf09603_374941-389592' '(at5g27030 : 1662.0) TOPLESS-related 3 (TPR3); FUNCTIONS IN: protein binding; INVOLVED IN: primary shoot apical meristem specification; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TOPLESS-related 2 (TAIR:AT3G16830.1). & (gnl|cdd|35487 : 131.0) no description available & (gnl|cdd|29257 : 122.0) no description available & (reliability: 3324.0) & (original description: Putative TPR3, Description = Topless-related protein 3, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf09604_171553-177565' '(at4g36860 : 646.0) LIM domain-containing protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Ubiquitin interacting motif (InterPro:IPR003903), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: DA1 (TAIR:AT1G19270.1); Has 6004 Blast hits to 4271 proteins in 323 species: Archae - 7; Bacteria - 228; Metazoa - 4096; Fungi - 190; Plants - 320; Viruses - 67; Other Eukaryotes - 1096 (source: NCBI BLink). & (gnl|cdd|36916 : 232.0) no description available & (reliability: 1292.0) & (original description: Putative DAR2, Description = Protein DA1-related 2, PFAM = PF12315;PF00412)' T '33.99' 'development.unspecified' 'niben101scf09703_167715-192710' '(at4g16280 : 355.0) Flowering time control protein (FCA); RNA binding;abscisic acid binding; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), WW/Rsp5/WWP (InterPro:IPR001202), Ribonucleoprotein, BRUNO-like (InterPro:IPR015903), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: flowering time control protein-related / FCA gamma-related (TAIR:AT2G47310.1). & (gnl|cdd|35366 : 285.0) no description available & (gnl|cdd|47687 : 80.3) no description available & (reliability: 710.0) & (original description: Putative FCA, Description = Flowering time control protein FCA, PFAM = PF00397;PF00076;PF00076)' T '33.99' 'development.unspecified' 'niben101scf09708_82171-88465' '(at4g20270 : 1102.0) Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function.; BARELY ANY MERISTEM 3 (BAM3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: regulation of meristem growth, protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, leaf development, floral organ development; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G65700.2); Has 219938 Blast hits to 139586 proteins in 4977 species: Archae - 151; Bacteria - 21929; Metazoa - 70277; Fungi - 10656; Plants - 90391; Viruses - 423; Other Eukaryotes - 26111 (source: NCBI BLink). & (p93194|rpk1_iponi : 452.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|36401 : 300.0) no description available & (gnl|cdd|84488 : 150.0) no description available & (reliability: 2204.0) & (original description: Putative BAM3, Description = Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3, PFAM = PF13855;PF00069;PF00560;PF08263)' T '33.99' 'development.unspecified' 'niben101scf09708_998796-1014002' '(at4g10180 : 767.0) Encodes a nuclear-localized protein that acts as a repressor of photomorphogenesis and may be involved in chromatin remodeling.; DE-ETIOLATED 1 (DET1); FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, negative regulation of photomorphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: De-etiolated protein 1, Det1 (InterPro:IPR019138), Six-hairpin glycosidase-like (InterPro:IPR008928); Has 248 Blast hits to 240 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|37769 : 570.0) no description available & (reliability: 1534.0) & (original description: Putative DET1, Description = Light-mediated development protein DET1, PFAM = PF09737)' T '33.99' 'development.unspecified' 'niben101scf09790_87278-91603' '(at4g00150 : 280.0) HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 208.0) no description available & (q5bn23|rga1_bracm : 90.9) DELLA protein RGA1 (RGA-like protein 1) (BrRGA1) - Brassica campestris (Field mustard) & (reliability: 560.0) & (original description: Putative HAM, Description = Hairy meristem, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf09792_58226-69777' '(at2g33430 : 188.0) differentiation and greening-like 1 (DAL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: plastid organization, endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA); LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT1G32580.1); Has 251 Blast hits to 228 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 251; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q38732|dag_antma : 86.7) DAG protein, chloroplast precursor - Antirrhinum majus (Garden snapdragon) & (reliability: 376.0) & (original description: Putative DAL1, Description = Plastid developmental protein DAG, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf09792_341704-349403' '(at4g28530 : 261.0) NAC domain containing protein 74 (NAC074); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT5G53950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66085 : 191.0) no description available & (q5cd17|nac77_orysa : 168.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 522.0) & (original description: Putative NAC17, Description = NAC domain-containing protein, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf09856_34927-40916' '(q38732|dag_antma : 147.0) DAG protein, chloroplast precursor - Antirrhinum majus (Garden snapdragon) & (at1g11430 : 146.0) plastid developmental protein DAG, putative; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT3G06790.2); Has 252 Blast hits to 229 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 252; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative MORF1, Description = Multiple organellar RNA editing factor 1, mitochondrial, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf09871_85129-89242' '(at1g09380 : 358.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G07050.1); Has 5897 Blast hits to 5875 proteins in 1081 species: Archae - 84; Bacteria - 3492; Metazoa - 6; Fungi - 4; Plants - 1243; Viruses - 0; Other Eukaryotes - 1068 (source: NCBI BLink). & (reliability: 716.0) & (original description: Putative wat1, Description = WAT1-related protein, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf09955_276780-280283' '(at2g19580 : 279.0) Member of TETRASPANIN family; tetraspanin2 (TET2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: Tetraspanin family protein (TAIR:AT5G46700.1); Has 515 Blast hits to 513 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 84; Fungi - 0; Plants - 420; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 558.0) & (original description: Putative TET2, Description = Tetraspanin-2, PFAM = PF00335)' T '33.99' 'development.unspecified' 'niben101scf09978_95373-118905' '(at2g34040 : 683.0) Apoptosis inhibitory protein 5 (API5); FUNCTIONS IN: binding; INVOLVED IN: anti-apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis inhibitory 5 (InterPro:IPR008383), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Apoptosis inhibitory protein 5 (API5) (TAIR:AT1G29030.1); Has 227 Blast hits to 217 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 6; Plants - 61; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|69441 : 666.0) no description available & (gnl|cdd|37424 : 476.0) no description available & (reliability: 1366.0) & (original description: Putative API5, Description = Apoptosis inhibitor 5-like protein API5, PFAM = PF05918)' T '33.99' 'development.unspecified' 'niben101scf10055_271216-282597' '(at5g45275 : 682.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G19450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70288 : 238.0) no description available & (reliability: 1340.0) & (original description: Putative NFD4, Description = Protein NUCLEAR FUSION DEFECTIVE 4, PFAM = PF06813)' T '33.99' 'development.unspecified' 'niben101scf10157_593782-606587' '(at2g03140 : 1168.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: esterase/lipase/thioesterase family protein (TAIR:AT3G50790.1). & (gnl|cdd|37049 : 299.0) no description available & (gnl|cdd|30778 : 148.0) no description available & (reliability: 2336.0) & (original description: Putative Os09g0436800, Description = CAAX amino terminal protease-like protein, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf10217_66025-82577' '(at4g21150 : 696.0) HAPLESS 6 (HAP6); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: response to cold, protein amino acid terminal N-glycosylation; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribophorin II (InterPro:IPR008814). & (gnl|cdd|86956 : 645.0) no description available & (gnl|cdd|37658 : 237.0) no description available & (reliability: 1392.0) & (original description: Putative RPN2, Description = Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2, PFAM = PF05817)' T '33.99' 'development.unspecified' 'niben101scf10225_133261-137044' '(gnl|cdd|36401 : 347.0) no description available & (at1g52540 : 326.0) Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G15890.1); Has 98543 Blast hits to 97377 proteins in 3831 species: Archae - 68; Bacteria - 11032; Metazoa - 36701; Fungi - 6941; Plants - 30133; Viruses - 293; Other Eukaryotes - 13375 (source: NCBI BLink). & (q8lkz1|nork_pea : 235.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (gnl|cdd|47549 : 161.0) no description available & (reliability: 652.0) & (original description: Putative At3g15890, Description = PTI1-like tyrosine-protein kinase At3g15890, PFAM = PF00069)' T '33.99' 'development.unspecified' 'niben101scf10322_179095-182154' '(at1g69490 : 248.0) Encodes a member of the NAC transcription factor gene family. It is expressed in floral primordia and upregulated by AP3 and PI. Its expression is associated with leaf senescence.; NAC-like, activated by AP3/PI (NAP); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 25 (TAIR:AT1G61110.1); Has 3046 Blast hits to 3040 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3046; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 186.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 155.0) no description available & (reliability: 496.0) & (original description: Putative NAC2, Description = NAC domain protein NAC2, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf10388_196123-198437' '(gnl|cdd|35504 : 121.0) no description available & (at3g15470 : 118.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G54200.1); Has 35932 Blast hits to 22007 proteins in 749 species: Archae - 56; Bacteria - 5680; Metazoa - 13723; Fungi - 7656; Plants - 4267; Viruses - 6; Other Eukaryotes - 4544 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative At2g37670, Description = WD repeat-containing protein 44, PFAM = PF00400)' T '33.99' 'development.unspecified' 'niben101scf10405_69270-74073' '(q07474|mads2_pethy : 342.0) Floral homeotic protein PMADS 2 - Petunia hybrida (Petunia) & (at5g20240 : 213.0) Floral homeotic gene encoding a MADS domain transcription factor. Required for the specification of petal and stamen identities.; PISTILLATA (PI); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G23260.1); Has 7000 Blast hits to 6999 proteins in 918 species: Archae - 0; Bacteria - 3; Metazoa - 620; Fungi - 300; Plants - 6000; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|29020 : 116.0) no description available & (gnl|cdd|35238 : 87.0) no description available & (reliability: 426.0) & (original description: Putative PMADS2, Description = Floral homeotic protein PMADS 2, PFAM = PF01486;PF00319)' T '33.99' 'development.unspecified' 'niben101scf10524_248501-251850' '(at4g01440 : 333.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT4G01450.2); Has 3147 Blast hits to 3133 proteins in 491 species: Archae - 24; Bacteria - 1505; Metazoa - 6; Fungi - 0; Plants - 1206; Viruses - 0; Other Eukaryotes - 406 (source: NCBI BLink). & (reliability: 666.0) & (original description: Putative At4g01440, Description = WAT1-related protein At4g01440, PFAM = PF00892;PF00892)' T '33.99' 'development.unspecified' 'niben101scf10575_24092-29357' '(at1g47530 : 430.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, ripening, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: root hair specific 2 (TAIR:AT1G12950.1); Has 9964 Blast hits to 9893 proteins in 2013 species: Archae - 182; Bacteria - 7111; Metazoa - 140; Fungi - 326; Plants - 1355; Viruses - 0; Other Eukaryotes - 850 (source: NCBI BLink). & (gnl|cdd|36561 : 404.0) no description available & (gnl|cdd|30880 : 185.0) no description available & (reliability: 860.0) & (original description: Putative Sb03g035610, Description = Protein DETOXIFICATION, PFAM = PF01554;PF01554)' T '33.99' 'development.unspecified' 'niben101scf10708_34201-36767' '(at5g43070 : 96.7) WPP family members contains an NE targeting domain. This domain, called the WPP domain after a highly conserved Trp-Pro-Pro motif, is necessary and sufficient for NE targeting of WPP1. RNAi suppression of WPP1 resulted in reduced mitotic activity.; WPP domain protein 1 (WPP1); BEST Arabidopsis thaliana protein match is: WPP domain protein 2 (TAIR:AT1G47200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative MAF1, Description = MFP1 attachment factor 1, PFAM = PF13943)' T '33.99' 'development.unspecified' 'niben101scf10774_228935-231531' '(at2g36026 : 117.0) Ovate family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 6 (TAIR:AT3G52525.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative OFP6, Description = AtOFP6, PFAM = PF04844)' T '33.99' 'development.unspecified' 'niben101scf10820_217986-223081' '(gnl|cdd|68610 : 211.0) no description available & (at1g70680 : 203.0) Caleosin-related family protein; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: Caleosin-related family protein (TAIR:AT1G70670.1); Has 342 Blast hits to 337 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 281; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 406.0) & (original description: Putative ATS1, Description = Caleosin, PFAM = PF05042)' T '33.99' 'development.unspecified' 'niben101scf10842_32981-36859' '(at1g47530 : 378.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, ripening, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: root hair specific 2 (TAIR:AT1G12950.1); Has 9964 Blast hits to 9893 proteins in 2013 species: Archae - 182; Bacteria - 7111; Metazoa - 140; Fungi - 326; Plants - 1355; Viruses - 0; Other Eukaryotes - 850 (source: NCBI BLink). & (gnl|cdd|36561 : 353.0) no description available & (gnl|cdd|30880 : 146.0) no description available & (reliability: 756.0) & (original description: Putative FFT, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554;PF01554)' T '33.99' 'development.unspecified' 'niben101scf11037_124695-127984' '(at3g22550 : 89.4) Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT3G63210.1); Has 558 Blast hits to 549 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 558; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative)' T '33.99' 'development.unspecified' 'niben101scf11037_337634-354031' '(at4g03020 : 698.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat (InterPro:IPR001680), WD repeat protein 23 (InterPro:IPR017399), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1). & (gnl|cdd|35487 : 194.0) no description available & (gnl|cdd|29257 : 120.0) no description available & (reliability: 1396.0) & (original description: Putative wdr23, Description = WD repeat-containing protein 23, PFAM = PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf11126_261181-269420' '(at1g65480 : 258.0) FT, together with LFY, promotes flowering and is antagonistic with its homologous gene, TERMINAL FLOWER1 (TFL1). FT is expressed in leaves and is induced by long day treatment. Either the FT mRNA or protein is translocated to the shoot apex where it induces its own expression. Recent data suggests that FT protein acts as a long-range signal. FT is a target of CO and acts upstream of SOC1.; FLOWERING LOCUS T (FT); FUNCTIONS IN: phosphatidylethanolamine binding, protein binding; INVOLVED IN: photoperiodism, flowering, positive regulation of flower development, regulation of flower development; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); BEST Arabidopsis thaliana protein match is: PEBP (phosphatidylethanolamine-binding protein) family protein (TAIR:AT4G20370.1); Has 2182 Blast hits to 2182 proteins in 306 species: Archae - 0; Bacteria - 0; Metazoa - 594; Fungi - 140; Plants - 1404; Viruses - 3; Other Eukaryotes - 41 (source: NCBI BLink). & (q9xh43|cet2_tobac : 202.0) CEN-like protein 2 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|38556 : 190.0) no description available & (gnl|cdd|29585 : 176.0) no description available & (reliability: 516.0) & (original description: Putative FT, Description = Protein FLOWERING LOCUS T, PFAM = PF01161)' T '33.99' 'development.unspecified' 'niben101scf11184_72583-77092' '(at1g78130 : 626.0) unfertilized embryo sac 2 (UNE2); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G10190.1); Has 16910 Blast hits to 16851 proteins in 2099 species: Archae - 450; Bacteria - 14339; Metazoa - 386; Fungi - 319; Plants - 340; Viruses - 3; Other Eukaryotes - 1073 (source: NCBI BLink). & (gnl|cdd|36544 : 430.0) no description available & (gnl|cdd|87335 : 105.0) no description available & (reliability: 1252.0) & (original description: Putative At5g10190, Description = Major facilitator protein, PFAM = PF07690)' T '33.99' 'development.unspecified' 'niben101scf11208_75867-78961' '(at1g01720 : 377.0) Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA.; ATAF1; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 32 (TAIR:AT1G77450.1); Has 3043 Blast hits to 3037 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3043; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q7f2l3|nac48_orysa : 350.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (gnl|cdd|66085 : 203.0) no description available & (reliability: 754.0) & (original description: Putative NAC002, Description = NAC domain-containing protein 2, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf11253_525705-535780' '(at5g46750 : 402.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ARF-GAP domain 9 (AGD9); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 8 (TAIR:AT4G17890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35925 : 339.0) no description available & (gnl|cdd|85433 : 147.0) no description available & (reliability: 804.0) & (original description: Putative AGD9, Description = Probable ADP-ribosylation factor GTPase-activating protein AGD9, PFAM = PF01412)' T '33.99' 'development.unspecified' 'niben101scf11254_55574-68693' '(at2g37330 : 377.0) Encodes an ABC transporter-like protein, without an ATPase domain, required for aluminum (Al) resistance/tolerance and may function to redistribute accumulated Al away from sensitive tissues in order to protect the growing root from the toxic effects of Al.; ALUMINUM SENSITIVE 3 (ALS3); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00245 (InterPro:IPR005226); Has 1906 Blast hits to 1906 proteins in 934 species: Archae - 39; Bacteria - 1722; Metazoa - 0; Fungi - 12; Plants - 43; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (gnl|cdd|30739 : 180.0) no description available & (reliability: 754.0) & (original description: Putative ALS3, Description = Protein ALUMINUM SENSITIVE 3, PFAM = PF03649)' T '33.99' 'development.unspecified' 'niben101scf11361_8966-15835' '(at2g45330 : 329.0) embryo defective 1067 (emb1067); FUNCTIONS IN: tRNA 2'-phosphotransferase activity, transferase activity, transferring phosphorus-containing groups; INVOLVED IN: tRNA splicing, via endonucleolytic cleavage and ligation, embryo development ending in seed dormancy; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Phosphotransferase KptA/Tpt1 (InterPro:IPR002745); BEST Arabidopsis thaliana protein match is: RNA 2'-phosphotransferase, Tpt1 / KptA family (TAIR:AT5G23600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37489 : 283.0) no description available & (gnl|cdd|65661 : 188.0) no description available & (reliability: 658.0) & (original description: Putative Trpt1, Description = tRNA 2'-phosphotransferase 1, PFAM = PF01885)' T '33.99' 'development.unspecified' 'niben101scf11366_235841-242195' '(at5g22330 : 785.0) RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1 (RIN1); FUNCTIONS IN: protein binding; INVOLVED IN: meristem development, regulation of defense response to fungus, incompatible interaction; LOCATED IN: nucleolus, nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TIP49, C-terminal (InterPro:IPR010339), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G49830.1); Has 3940 Blast hits to 3882 proteins in 1253 species: Archae - 399; Bacteria - 2038; Metazoa - 370; Fungi - 432; Plants - 137; Viruses - 0; Other Eukaryotes - 564 (source: NCBI BLink). & (gnl|cdd|37153 : 746.0) no description available & (gnl|cdd|31417 : 574.0) no description available & (reliability: 1570.0) & (original description: Putative RIN1, Description = RuvB-like protein 1, PFAM = PF06068)' T '33.99' 'development.unspecified' 'niben101scf11383_7768-10332' '(at5g27980 : 110.0) Seed maturation protein; CONTAINS InterPro DOMAIN/s: Seed maturation protein (InterPro:IPR007011); BEST Arabidopsis thaliana protein match is: Seed maturation protein (TAIR:AT3G22490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p09444|lea34_goshi : 103.0) Late embryogenesis abundant protein D-34 (LEA D-34) - Gossypium hirsutum (Upland cotton) & (reliability: 220.0) & (original description: Putative ECP31, Description = AtECP31, PFAM = PF04927;PF04927)' T '33.99' 'development.unspecified' 'niben101scf11416_40100-45599' '(at3g20070 : 151.0) Encodes a plant-specific protein of unknown function. Mutant embryos contain at most four small cells. The endosperm nucleoli are enlarged. Gene is expressed in siliques based on EST information.; TITAN9 (TTN9); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy, endosperm development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative TCM_040798, Description = Titan9, putative isoform 1, PFAM = )' T '33.99' 'development.unspecified' 'niben101scf11508_247914-251781' '(at2g02450 : 244.0) NAC domain containing protein 35 (NAC035); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 94 (TAIR:AT5G39820.1); Has 5401 Blast hits to 4721 proteins in 140 species: Archae - 0; Bacteria - 7; Metazoa - 144; Fungi - 68; Plants - 2924; Viruses - 5; Other Eukaryotes - 2253 (source: NCBI BLink). & (gnl|cdd|66085 : 168.0) no description available & (q53nf7|nac71_orysa : 137.0) NAC domain-containing protein 71 (ONAC071) - Oryza sativa (Rice) & (reliability: 488.0) & (original description: Putative NAC035, Description = NAC domain-containing protein 35, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf11515_36200-44109' '(at5g10510 : 417.0) Encodes an AP2-domain transcription factor involved in root stem cell identity and root development.; AINTEGUMENTA-like 6 (AIL6); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: AINTEGUMENTA-like 7 (TAIR:AT5G65510.1). & (q8l3u3|bbm1_brana : 302.0) Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) & (gnl|cdd|47695 : 91.8) no description available & (reliability: 834.0) & (original description: Putative AIL6, Description = AP2-like ethylene-responsive transcription factor AIL6, PFAM = PF00847;PF00847)' T '33.99' 'development.unspecified' 'niben101scf11663_87248-100591' '(at4g03240 : 187.0) Encodes AtFH, a frataxin homolog. Frataxin is required for the biogenesis of mitochondria in different organisms. AtFH knock-out mutants are lethal. Required for full activity of mitochondrial Fe-S proteins. Deficiency of AtFH induces oxidative stress.; frataxin homolog (FH); CONTAINS InterPro DOMAIN/s: Frataxin (InterPro:IPR017789), Frataxin conserved site (InterPro:IPR020895), Frataxin-like (InterPro:IPR002908); Has 1148 Blast hits to 1148 proteins in 551 species: Archae - 0; Bacteria - 783; Metazoa - 128; Fungi - 127; Plants - 48; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|38623 : 145.0) no description available & (gnl|cdd|29607 : 120.0) no description available & (reliability: 374.0) & (original description: Putative ftx1, Description = Mitochondrial matrix protein frataxin, PFAM = PF01491)' T '33.99' 'development.unspecified' 'niben101scf11689_81019-89246' '(at1g63680 : 946.0) Encodes AtMurE, a homolog of the bacterial MurE that catalyze the ATP-dependent formation of UDP-N-acetylmuramic acid-tripeptide in bacterial peptidoglycan biosynthesis. Localized to plastids. AtMurE is involved in chloroplast biogenesis.; MURE; FUNCTIONS IN: acid-amino acid ligase activity, ATP binding, ligase activity; INVOLVED IN: chloroplast fission, chloroplast organization, biosynthetic process; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Mur ligase, central (InterPro:IPR013221), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (InterPro:IPR005761), Mur ligase, N-terminal (InterPro:IPR000713), Mur ligase, C-terminal (InterPro:IPR004101); Has 18234 Blast hits to 18170 proteins in 2587 species: Archae - 50; Bacteria - 13487; Metazoa - 59; Fungi - 43; Plants - 60; Viruses - 2; Other Eukaryotes - 4533 (source: NCBI BLink). & (gnl|cdd|80542 : 517.0) no description available & (reliability: 1892.0) & (original description: Putative murE, Description = UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase, PFAM = PF01225;PF08245;PF02875)' T '33.99' 'development.unspecified' 'niben101scf11709_19050-28999' '(at2g32950 : 834.0) Represses photomorphogenesis and induces skotomorphogenesis in the dark. Contains a ring finger zinc-binding motif, a coiled-coil domain, and several WD-40 repeats, similar to G-beta proteins. The C-terminus has homology to TAFII80, a subunit of the TFIID component of the RNA polymerase II of Drosophila. Nuclear localization in the dark and cytoplasmic in the light.; CONSTITUTIVE PHOTOMORPHOGENIC 1 (COP1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA1-related 2 (TAIR:AT4G11110.1); Has 42218 Blast hits to 27649 proteins in 756 species: Archae - 30; Bacteria - 4454; Metazoa - 17716; Fungi - 8958; Plants - 5306; Viruses - 46; Other Eukaryotes - 5708 (source: NCBI BLink). & (p93471|cop1_pea : 824.0) E3 ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive photomorphogenesis protein 1) - Pisum sativum (Garden pea) & (gnl|cdd|29257 : 136.0) no description available & (gnl|cdd|35485 : 102.0) no description available & (reliability: 1668.0) & (original description: Putative COP1, Description = E3 ubiquitin-protein ligase COP1, PFAM = PF13923;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf11773_166988-173419' '(at4g28530 : 277.0) NAC domain containing protein 74 (NAC074); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT5G53950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66085 : 193.0) no description available & (q5cd17|nac77_orysa : 179.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 554.0) & (original description: Putative NAC17, Description = NAC domain protein 17, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf11790_136910-142092' '(at4g20900 : 280.0) ms5 mutants are male sterile, pollen tetrads undergo an extra round of division after meiosis II without chromosome replication, resulting in chromosome abnormalities. Gene product has some similarity to SCP1, a rat synaptonemal complex protein.; MALE-STERILE 5 (MS5); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G44330.1); Has 181 Blast hits to 179 proteins in 26 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 0; Plants - 166; Viruses - 5; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative MS5, Description = Tetratricopeptide-like helical, PFAM = PF00515)' T '33.99' 'development.unspecified' 'niben101scf11886_375675-404660' '(at5g49930 : 1310.0) embryo defective 1441 (emb1441); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fibronectin-binding A, N-terminal (InterPro:IPR008616), Protein of unknown function DUF3441 (InterPro:IPR021846), Zinc finger, CCHC-type (InterPro:IPR001878), Protein of unknown function DUF814 (InterPro:IPR008532); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37241 : 727.0) no description available & (gnl|cdd|31484 : 216.0) no description available & (reliability: 2620.0) & (original description: Putative BnaC03g27540D, Description = BnaC03g27540D protein, PFAM = PF05833;PF05833;PF11923;PF00098;PF05670)' T '33.99' 'development.unspecified' 'niben101scf12148_129239-144649' '(at5g17440 : 426.0) LUC7 related protein; CONTAINS InterPro DOMAIN/s: LUC7 related (InterPro:IPR004882); BEST Arabidopsis thaliana protein match is: LUC7 related protein (TAIR:AT3G03340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36015 : 195.0) no description available & (gnl|cdd|66842 : 189.0) no description available & (reliability: 822.0) & (original description: Putative UNE6, Description = LUC7 related protein, PFAM = PF03194;PF03194)' T '33.99' 'development.unspecified' 'niben101scf12202_43628-63096' '(at3g08850 : 1925.0) Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive.; RAPTOR1; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), WD40 repeat (InterPro:IPR001680), Regulatory associated protein of TOR (InterPro:IPR004083), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: HEAT repeat ;WD domain, G-beta repeat protein protein (TAIR:AT5G01770.1); Has 7799 Blast hits to 6065 proteins in 379 species: Archae - 2; Bacteria - 1590; Metazoa - 2741; Fungi - 1618; Plants - 862; Viruses - 0; Other Eukaryotes - 986 (source: NCBI BLink). & (gnl|cdd|36730 : 1600.0) no description available & (gnl|cdd|29257 : 101.0) no description available & (reliability: 3850.0) & (original description: Putative mip1, Description = Regulatory-associated protein of mTOR, PFAM = PF14538)' T '33.99' 'development.unspecified' 'niben101scf12205_380495-388651' '(at3g14770 : 237.0) Nodulin MtN3 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT1G21460.1); Has 914 Blast hits to 907 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 192; Fungi - 0; Plants - 613; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (gnl|cdd|36836 : 162.0) no description available & (reliability: 474.0) & (original description: Putative SWEET2A, Description = Bidirectional sugar transporter SWEET2a, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf12211_317426-323277' '(at1g80530 : 663.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G34950.1); Has 2493 Blast hits to 2437 proteins in 753 species: Archae - 26; Bacteria - 1395; Metazoa - 19; Fungi - 170; Plants - 599; Viruses - 0; Other Eukaryotes - 284 (source: NCBI BLink). & (gnl|cdd|70288 : 278.0) no description available & (reliability: 1326.0) & (original description: Putative Os06g0179200, Description = Nodulin-like protein, PFAM = PF07690;PF06813)' T '33.99' 'development.unspecified' 'niben101scf12314_118920-124776' '(at5g61430 : 371.0) NAC domain containing protein 100 (NAC100); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 80 (TAIR:AT5G07680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5cd17|nac77_orysa : 221.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (gnl|cdd|66085 : 217.0) no description available & (reliability: 742.0) & (original description: Putative nac1, Description = NAC domain-containing protein 1, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf12321_198337-209347' '(at5g08560 : 712.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT5G43920.1); Has 58921 Blast hits to 28907 proteins in 822 species: Archae - 84; Bacteria - 8409; Metazoa - 23216; Fungi - 12597; Plants - 7341; Viruses - 6; Other Eukaryotes - 7268 (source: NCBI BLink). & (gnl|cdd|35514 : 608.0) no description available & (gnl|cdd|29257 : 164.0) no description available & (reliability: 1424.0) & (original description: Putative wdr26, Description = WD repeat-containing protein 26, PFAM = PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf12372_137257-157099' '(at5g56190 : 591.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G13340.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29257 : 92.8) no description available & (reliability: 1182.0) & (original description: Putative gbp3, Description = GAMYB-binding protein, PFAM = PF00400)' T '33.99' 'development.unspecified' 'niben101scf12414_463178-469189' '(at5g51640 : 622.0) Encodes leaf-senescence-related protein. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; YELLOW-LEAF-SPECIFIC GENE 7 (YLS7); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 18 (TAIR:AT4G25360.2); Has 1342 Blast hits to 1319 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1337; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|72785 : 165.0) no description available & (reliability: 1244.0) & (original description: Putative YLS7, Description = Protein YLS7, PFAM = PF14416;PF13839)' T '33.99' 'development.unspecified' 'niben101scf12470_280521-283609' '(at3g15030 : 119.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 103.0) no description available & (reliability: 232.0) & (original description: Putative BRC1, Description = Transcription factor PCF8, PFAM = PF03634)' T '33.99' 'development.unspecified' 'niben101scf12858_13482-18260' '(at1g21460 : 312.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT5G53190.1); Has 988 Blast hits to 930 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 221; Fungi - 0; Plants - 643; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36836 : 178.0) no description available & (gnl|cdd|86234 : 87.1) no description available & (reliability: 624.0) & (original description: Putative std1, Description = Bidirectional sugar transporter SWEET, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf12858_99689-110406' '(at1g21460 : 229.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT5G53190.1); Has 988 Blast hits to 930 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 221; Fungi - 0; Plants - 643; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36836 : 160.0) no description available & (gnl|cdd|86234 : 80.2) no description available & (reliability: 458.0) & (original description: Putative SWEET1, Description = Bidirectional sugar transporter SWEET, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf12874_85134-89730' '(at5g06710 : 205.0) Homeobox-leucine zipper protein.; homeobox from Arabidopsis thaliana (HAT14); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT4G17460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35704 : 141.0) no description available & (reliability: 410.0) & (original description: Putative HAT14, Description = Homeobox-leucine zipper protein HAT14, PFAM = PF02183;PF00046;PF04618)' T '33.99' 'development.unspecified' 'niben101scf12935_91251-96615' '(at1g20640 : 686.0) Plant regulator RWP-RK family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G76350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|65798 : 84.3) no description available & (reliability: 1372.0) & (original description: Putative NLP5, Description = Protein NLP5, PFAM = PF00564;PF02042)' T '33.99' 'development.unspecified' 'niben101scf13002_333519-340209' '(at3g58040 : 444.0) Encodes a RING finger domain containing protein that interacts with AtRAP2.2.; seven in absentia of Arabidopsis 2 (SINAT2); FUNCTIONS IN: protein binding; INVOLVED IN: multicellular organismal development, protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Seven-in-absentia protein, TRAF-like domain (InterPro:IPR018121), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, SIAH-type (InterPro:IPR013010), Seven In Absentia Homolog-type (InterPro:IPR013323), Seven-in-absentia protein, sina (InterPro:IPR004162), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT2G41980.1); Has 1862 Blast hits to 1847 proteins in 701 species: Archae - 0; Bacteria - 0; Metazoa - 1276; Fungi - 4; Plants - 482; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink). & (gnl|cdd|38212 : 277.0) no description available & (gnl|cdd|86255 : 244.0) no description available & (q8t3y0|sinal_drome : 148.0) Probable E3 ubiquitin-protein ligase sina-like CG13030 (EC 6.3.2.-) - Drosophila melanogaster (Fruit fly) & (reliability: 888.0) & (original description: Putative SINA5, Description = E3 ubiquitin-protein ligase, PFAM = PF03145)' T '33.99' 'development.unspecified' 'niben101scf13103_58624-64789' '(at4g36160 : 388.0) Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.; NAC domain containing protein 76 (NAC076); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: vascular related NAC-domain protein 1 (TAIR:AT2G18060.1); Has 3021 Blast hits to 3016 proteins in 76 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 3020; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q5z6b6|nac76_orysa : 241.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (gnl|cdd|66085 : 215.0) no description available & (reliability: 776.0) & (original description: Putative NAC076, Description = NAC domain-containing protein 76, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf13167_75585-78778' '(at5g44730 : 431.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity, phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, REG-2-like (InterPro:IPR011949), HAD-superfamily hydrolase, subfamily IA, variant 1 (InterPro:IPR006439); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38295 : 211.0) no description available & (gnl|cdd|31215 : 91.9) no description available & (reliability: 862.0) & (original description: Putative Sb10g026570, Description = Putative uncharacterized protein Sb10g026570, PFAM = PF00702)' T '33.99' 'development.unspecified' 'niben101scf13411_564443-572320' '(at5g08560 : 670.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT5G43920.1); Has 58921 Blast hits to 28907 proteins in 822 species: Archae - 84; Bacteria - 8409; Metazoa - 23216; Fungi - 12597; Plants - 7341; Viruses - 6; Other Eukaryotes - 7268 (source: NCBI BLink). & (gnl|cdd|35514 : 595.0) no description available & (gnl|cdd|29257 : 145.0) no description available & (reliability: 1340.0) & (original description: Putative WDR26, Description = WD repeat-containing protein 26, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf13527_73219-82437' '(at2g37560 : 452.0) Origin Recognition Complex subunit 2. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts strongly with all ORC subunits.; origin recognition complex second largest subunit 2 (ORC2); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 2 (InterPro:IPR007220); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38139 : 302.0) no description available & (gnl|cdd|86535 : 291.0) no description available & (reliability: 904.0) & (original description: Putative orc2, Description = Origin recognition complex subunit 2, PFAM = PF04084)' T '33.99' 'development.unspecified' 'niben101scf13527_73681-82441' '(at2g37560 : 494.0) Origin Recognition Complex subunit 2. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts strongly with all ORC subunits.; origin recognition complex second largest subunit 2 (ORC2); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 2 (InterPro:IPR007220); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38139 : 324.0) no description available & (gnl|cdd|86535 : 306.0) no description available & (reliability: 988.0) & (original description: Putative ORC2, Description = Origin of replication complex subunit 2, PFAM = PF04084)' T '33.99' 'development.unspecified' 'niben101scf13572_15497-37083' '(at3g02310 : 240.0) MADS-box protein, binds K domain of AG in vivo; SEPALLATA 2 (SEP2); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7363 Blast hits to 7362 proteins in 916 species: Archae - 3; Bacteria - 0; Metazoa - 630; Fungi - 305; Plants - 6350; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (q03489|agl9_pethy : 231.0) Agamous-like MADS-box protein AGL9 homolog (Floral homeotic protein FBP2) (Floral-binding protein 2) - Petunia hybrida (Petunia) & (gnl|cdd|29020 : 124.0) no description available & (gnl|cdd|35238 : 101.0) no description available & (reliability: 480.0) & (original description: Putative 37500, Description = Developmental protein SEPALLATA 2, PFAM = PF01486;PF00319)' T '33.99' 'development.unspecified' 'niben101scf13680_7917-10924' '(at1g06920 : 97.4) ovate family protein 4 (OFP4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 2 (TAIR:AT2G30400.1); Has 524 Blast hits to 514 proteins in 51 species: Archae - 0; Bacteria - 6; Metazoa - 52; Fungi - 2; Plants - 429; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|68419 : 90.7) no description available & (reliability: 194.8) & (original description: Putative OFP1, Description = Ovate family protein 1, PFAM = PF13724;PF04844)' T '33.99' 'development.unspecified' 'niben101scf14022_47931-69544' '(at2g06210 : 1433.0) Encodes a yeast CTR9 homolog that is involved in the control of flowering time by elevating FLC expression to a level that creates the vernalization-responsive, winter-annual habit. Yeast CTR9 is a component of a five-member PAF1 complex that associates with RNA pol II and is thought to regulate gene expression by recruiting SET1 (a histone 3 Lys 4 [H3-K4] methyl transferase) to the initially transcribed [5'] regions of target chromatin. Mutants display reduced H3-K4 methylation in both FLC and FLM chromatin.; EARLY FLOWERING 8 (ELF8); FUNCTIONS IN: binding; INVOLVED IN: positive regulation of transcription, DNA-dependent, histone methylation, negative regulation of flower development; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04240.1); Has 39956 Blast hits to 25035 proteins in 1980 species: Archae - 1189; Bacteria - 13149; Metazoa - 9789; Fungi - 2497; Plants - 1315; Viruses - 192; Other Eukaryotes - 11825 (source: NCBI BLink). & (gnl|cdd|37213 : 841.0) no description available & (reliability: 2866.0) & (original description: Putative VIP6, Description = Protein CTR9 homolog, PFAM = PF13181;PF13181;PF14559;PF14559;PF13432)' T '33.99' 'development.unspecified' 'niben101scf14233_50096-73638' '(at5g07300 : 778.0) Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms.; BONZAI 2 (BON2); FUNCTIONS IN: calcium-dependent phospholipid binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36541 : 502.0) no description available & (gnl|cdd|29232 : 303.0) no description available & (reliability: 1556.0) & (original description: Putative BON2, Description = Protein BONZAI 2, PFAM = PF00168;PF00168;PF07002)' T '33.99' 'development.unspecified' 'niben101scf14262_75302-86637' '(at3g61790 : 539.0) Protein with RING/U-box and TRAF-like domains; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: multicellular organismal development, ubiquitin-dependent protein catabolic process, protein ubiquitination; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Seven-in-absentia protein, TRAF-like domain (InterPro:IPR018121), Zinc finger, SIAH-type (InterPro:IPR013010), Zinc finger, RING-type (InterPro:IPR001841), Seven In Absentia Homolog-type (InterPro:IPR013323), Seven-in-absentia protein, sina (InterPro:IPR004162), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT4G27880.1); Has 1836 Blast hits to 1817 proteins in 706 species: Archae - 0; Bacteria - 0; Metazoa - 1264; Fungi - 11; Plants - 486; Viruses - 2; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|38212 : 313.0) no description available & (gnl|cdd|86255 : 277.0) no description available & (q8t3y0|sinal_drome : 141.0) Probable E3 ubiquitin-protein ligase sina-like CG13030 (EC 6.3.2.-) - Drosophila melanogaster (Fruit fly) & (reliability: 1078.0) & (original description: Putative SINAT3, Description = E3 ubiquitin-protein ligase SINAT3, PFAM = PF03145)' T '33.99' 'development.unspecified' 'niben101scf14516_1-72408' '(at4g27410 : 360.0) Encodes a NAC transcription factor induced in response to dessication. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response.; RESPONSIVE TO DESICCATION 26 (RD26); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 19 (TAIR:AT1G52890.1); Has 2991 Blast hits to 2983 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2991; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q52qh4|nac68_orysa : 236.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (gnl|cdd|66085 : 204.0) no description available & (reliability: 720.0) & (original description: Putative nac, Description = NAC transcription factor, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf14662_144350-147765' '(at1g50420 : 607.0) Encodes a scarecrow-like protein (SCL3) Putative transcription factors interacting with the gene product of VHA-B1 (vacuolar ATPase subunit B1; as shown through yeast two-hybrid assay).; scarecrow-like 3 (SCL3); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 21 (TAIR:AT2G04890.1); Has 3106 Blast hits to 2488 proteins in 309 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 3100; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|67150 : 264.0) no description available & (q9st48|dwrf8_maize : 225.0) DELLA protein DWARF8 (Protein dwarf-8) - Zea mays (Maize) & (reliability: 1214.0) & (original description: Putative SCL3, Description = Scarecrow-like protein 3, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf14799_5062-12256' '(at5g39400 : 539.0) PTEN1; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Phosphatase tensin type (InterPro:IPR014019), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Tensin phosphatase, C2 domain (InterPro:IPR014020); BEST Arabidopsis thaliana protein match is: PTEN 2 (TAIR:AT3G19420.1); Has 1458 Blast hits to 1454 proteins in 210 species: Archae - 8; Bacteria - 27; Metazoa - 855; Fungi - 236; Plants - 75; Viruses - 0; Other Eukaryotes - 257 (source: NCBI BLink). & (gnl|cdd|37494 : 256.0) no description available & (reliability: 1078.0) & (original description: Putative PTEN1, Description = Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN1, PFAM = PF10409;PF00782)' T '33.99' 'development.unspecified' 'niben101scf14872_81590-94614' '(at4g17890 : 435.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ARF-GAP domain 8 (AGD8); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 9 (TAIR:AT5G46750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35925 : 337.0) no description available & (gnl|cdd|85433 : 143.0) no description available & (reliability: 842.0) & (original description: Putative AGD8, Description = Probable ADP-ribosylation factor GTPase-activating protein AGD8, PFAM = PF01412)' T '33.99' 'development.unspecified' 'niben101scf15077_90468-97224' '(at3g15610 : 543.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G52730.1); Has 43706 Blast hits to 23089 proteins in 800 species: Archae - 76; Bacteria - 7357; Metazoa - 15603; Fungi - 10314; Plants - 4879; Viruses - 0; Other Eukaryotes - 5477 (source: NCBI BLink). & (gnl|cdd|35499 : 510.0) no description available & (gnl|cdd|29257 : 158.0) no description available & (reliability: 1074.0) & (original description: Putative strap, Description = Serine-threonine kinase receptor-associated protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf15187_280367-302396' '(at5g08560 : 659.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT5G43920.1); Has 58921 Blast hits to 28907 proteins in 822 species: Archae - 84; Bacteria - 8409; Metazoa - 23216; Fungi - 12597; Plants - 7341; Viruses - 6; Other Eukaryotes - 7268 (source: NCBI BLink). & (gnl|cdd|35514 : 596.0) no description available & (gnl|cdd|29257 : 174.0) no description available & (reliability: 1318.0) & (original description: Putative WDS, Description = Transducin/WD40 domain-containing protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf15391_655891-658418' '(at5g46700 : 204.0) Encodes a transmembrane protein of the tetraspanin (TET) family, one of 17 members found in Arabidopsis. Double mutant analysis showed that TRN1 and TRN2 act in the same pathway. Required for the maintenance of both the radial pattern of tissue differentiation in the root and for the subsequent circumferential pattern within the epidermis.; TORNADO 2 (TRN2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: radial pattern formation, meristem structural organization, aging, leaf vascular tissue pattern formation, root morphogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 32 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499); BEST Arabidopsis thaliana protein match is: tetraspanin2 (TAIR:AT2G19580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative Os09g0425900, Description = Os09g0425900 protein, PFAM = PF00335)' T '33.99' 'development.unspecified' 'niben101scf15437_187770-191518' '(q69vg1|cigr1_orysa : 615.0) Chitin-inducible gibberellin-responsive protein 1 - Oryza sativa (Rice) & (at5g48150 : 511.0) Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway.; phytochrome a signal transduction 1 (PAT1); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 21 (TAIR:AT2G04890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67150 : 319.0) no description available & (reliability: 992.0) & (original description: Putative CIGR1, Description = Chitin-inducible gibberellin-responsive protein 1, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf15496_8120-47187' '(at4g17670 : 106.0) Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT5G47060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative At5g47060, Description = BnaC01g10250D protein, PFAM = PF04570)' T '33.99' 'development.unspecified' 'niben101scf15536_340218-345104' '(at4g10850 : 253.0) Nodulin MtN3 family protein; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT1G66770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36836 : 205.0) no description available & (gnl|cdd|86234 : 81.7) no description available & (reliability: 506.0) & (original description: Putative SWEET7, Description = Bidirectional sugar transporter SWEET7, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf15541_13060-19463' '(at4g33400 : 810.0) Vacuolar import/degradation, Vid27-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Vacuolar import/degradation, Vid27-related (InterPro:IPR013863); BEST Arabidopsis thaliana protein match is: Vacuolar import/degradation, Vid27-related protein (TAIR:AT3G19240.1); Has 271 Blast hits to 271 proteins in 130 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 139; Plants - 79; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (gnl|cdd|37606 : 589.0) no description available & (gnl|cdd|71981 : 142.0) no description available & (reliability: 1620.0) & (original description: Putative dem, Description = Dem protein, PFAM = PF08553)' T '33.99' 'development.unspecified' 'niben101scf15653_42777-53255' '(at1g34550 : 635.0) EMBRYO DEFECTIVE 2756 (EMB2756); INVOLVED IN: response to cadmium ion, embryo development ending in seed dormancy; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF616 (InterPro:IPR006852); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF616) (TAIR:AT4G09630.1); Has 593 Blast hits to 590 proteins in 103 species: Archae - 14; Bacteria - 45; Metazoa - 74; Fungi - 32; Plants - 255; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (gnl|cdd|68342 : 454.0) no description available & (reliability: 1270.0) & (original description: Putative BnaAnng02230D, Description = BnaAnng02230D protein, PFAM = PF04765)' T '33.99' 'development.unspecified' 'niben101scf15657_266133-272829' '(at5g48450 : 806.0) Encodes a protein with two DUF26 domains and a signal peptide for secretion. The protein is transported to the apoplast when it is expressed as a GFP fusion protein.; SKU5 similar 3 (sks3); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT4G12420.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 569.0) no description available & (q00624|aso_brana : 479.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|87357 : 154.0) no description available & (reliability: 1454.0) & (original description: Putative sks3, Description = Monocopper oxidase-like protein SKU5, PFAM = PF07731;PF00394;PF07732)' T '33.99' 'development.unspecified' 'niben101scf16148_217911-228634' '(at4g16440 : 672.0) Encodes a [FeFe]-hydrogenase-like protein named Gollum (for Growth in different Oxygen LeveLs inflUences Morphogenesis). Heterologous expression of Gollum in E. coli indicates that it probably contains two [Fe-S] clusters with different magnetic properties. Sequence alignment analysis indicates that these two clusters would be topologically equivalent to the mesial and proximal [Fe-S] centers of [FeFe]-hydrogenases. Knockdown mutants (RNAi) show a dwarf phenotype at the normal atmospheric partial oxygen pressure of 21 kPa. This dwarf phenotype could be rescued by growing the plant under low oxygen pressure (5kPa), suggesting a role for this gene in oxygen sensing.; ferredoxin hydrogenases; CONTAINS InterPro DOMAIN/s: Iron hydrogenase, large subunit, C-terminal (InterPro:IPR004108), Iron hydrogenase (InterPro:IPR009016), Iron hydrogenase, small subunit-like (InterPro:IPR003149); Has 2574 Blast hits to 2544 proteins in 612 species: Archae - 1; Bacteria - 1826; Metazoa - 221; Fungi - 188; Plants - 72; Viruses - 0; Other Eukaryotes - 266 (source: NCBI BLink). & (gnl|cdd|37650 : 454.0) no description available & (gnl|cdd|86178 : 266.0) no description available & (reliability: 1344.0) & (original description: Putative NAR1, Description = Protein NAR1, PFAM = PF02256;PF02906)' T '33.99' 'development.unspecified' 'niben101scf16254_145468-152433' '(at1g22160 : 90.5) Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT1G78020.1); Has 511 Blast hits to 511 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 511; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative , Description = , PFAM = PF04570)' T '33.99' 'development.unspecified' 'niben101scf16469_157419-161940' '(at3g18400 : 281.0) NAC domain containing protein 58 (NAC058); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 38 (TAIR:AT2G24430.2); Has 3056 Blast hits to 3045 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3049; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|66085 : 217.0) no description available & (q5cd17|nac77_orysa : 207.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 562.0) & (original description: Putative NH15, Description = Nam-like protein 15, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf16556_97420-101298' '(gnl|cdd|71337 : 174.0) no description available & (at4g00650 : 108.0) Encodes a major determinant of natural variation in Arabidopsis flowering time. Dominant alleles of FRI confer a vernalization requirement causing plants to overwinter vegetatively. Many early flowering accessions carry loss-of-function fri alleles .Twenty distinct haplotypes that contain non-functional FRI alleles have been identified and the distribution analyzed in over 190 accessions. The common lab strains- Col and Ler each carry loss of function mutations in FRI.; FRIGIDA (FRI); CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT5G48385.1); Has 841 Blast hits to 841 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 841; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative PGSC0003DMG400031151, Description = Putative ovule protein, PFAM = PF07899)' T '33.99' 'development.unspecified' 'niben101scf16888_26964-43296' '(at2g21150 : 439.0) XAP5 family protein involved in light regulation of the circadian clock and photomorphogenesis. Nuclear localized.; XAP5 CIRCADIAN TIMEKEEPER (XCT); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of circadian rhythm, response to blue light, response to red light, regulation of photomorphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: XAP5 protein (InterPro:IPR007005); Has 1721 Blast hits to 1474 proteins in 237 species: Archae - 2; Bacteria - 40; Metazoa - 614; Fungi - 190; Plants - 85; Viruses - 22; Other Eukaryotes - 768 (source: NCBI BLink). & (gnl|cdd|38105 : 371.0) no description available & (gnl|cdd|68493 : 296.0) no description available & (reliability: 878.0) & (original description: Putative XCT, Description = Protein XAP5 CIRCADIAN TIMEKEEPER, PFAM = PF04921)' T '33.99' 'development.unspecified' 'niben101scf16937_83330-89520' '(at2g18250 : 227.0) At2g18250 encodes pantetheine-phosphate adenylyltransferase catalyzing the formation of dephospho-CoA from pantetheine 4'-phosphate. The enzyme is involved in coenzyme A biosynthesis.; 4-phosphopantetheine adenylyltransferase (COAD); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); Has 633 Blast hits to 630 proteins in 285 species: Archae - 179; Bacteria - 4; Metazoa - 125; Fungi - 130; Plants - 59; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (gnl|cdd|38561 : 193.0) no description available & (gnl|cdd|28826 : 187.0) no description available & (reliability: 454.0) & (original description: Putative COAD, Description = Phosphopantetheine adenylyltransferase, PFAM = PF01467)' T '33.99' 'development.unspecified' 'niben101scf17290_40037-58246' '(at2g19080 : 286.0) metaxin-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein targeting to mitochondrion; LOCATED IN: mitochondrial outer membrane, mitochondrion, mitochondrial inner membrane, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Outer mitochondrial membrane transport complex protein, Metaxin (InterPro:IPR017410); Has 480 Blast hits to 480 proteins in 107 species: Archae - 0; Bacteria - 61; Metazoa - 333; Fungi - 17; Plants - 57; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|38238 : 188.0) no description available & (reliability: 572.0) & (original description: Putative MTX1, Description = Mitochondrial outer membrane import complex protein METAXIN, PFAM = PF17171;PF17172)' T '33.99' 'development.unspecified' 'niben101scf17294_32092-39102' '(at5g48450 : 390.0) Encodes a protein with two DUF26 domains and a signal peptide for secretion. The protein is transported to the apoplast when it is expressed as a GFP fusion protein.; SKU5 similar 3 (sks3); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT4G12420.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36477 : 390.0) no description available & (q00624|aso_brana : 340.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 129.0) no description available & (reliability: 758.0) & (original description: Putative sks3, Description = Multicopper oxidase, putative, PFAM = PF07732;PF07731;PF00394)' T '33.99' 'development.unspecified' 'niben101scf17294_35163-40156' '(gnl|cdd|36477 : 319.0) no description available & (at1g21850 : 311.0) SKU5 similar 8 (sks8); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 7 (TAIR:AT1G21860.1); Has 5145 Blast hits to 5091 proteins in 951 species: Archae - 16; Bacteria - 1604; Metazoa - 263; Fungi - 1857; Plants - 1262; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (q00624|aso_brana : 273.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (gnl|cdd|84744 : 105.0) no description available & (reliability: 614.0) & (original description: Putative sks3, Description = Monocopper oxidase-like protein SKU5, PFAM = PF07731;PF00394)' T '33.99' 'development.unspecified' 'niben101scf17839_158505-170831' '(p29162|ntp3_tobac : 787.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (at1g55570 : 746.0) SKU5 similar 12 (sks12); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 11 (TAIR:AT3G13390.1); Has 5441 Blast hits to 5412 proteins in 1035 species: Archae - 18; Bacteria - 1816; Metazoa - 269; Fungi - 1918; Plants - 1254; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (gnl|cdd|36477 : 576.0) no description available & (gnl|cdd|87357 : 147.0) no description available & (reliability: 1416.0) & (original description: Putative p303, Description = L-ascorbate oxidase-like protein, PFAM = PF07731;PF00394;PF07732)' T '33.99' 'development.unspecified' 'niben101scf17947_71646-181592' '(at1g29400 : 687.0) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices.; MEI2-like protein 5 (ML5); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like 3 (TAIR:AT4G18120.2); Has 6281 Blast hits to 5530 proteins in 358 species: Archae - 4; Bacteria - 106; Metazoa - 3185; Fungi - 1006; Plants - 1245; Viruses - 0; Other Eukaryotes - 735 (source: NCBI BLink). & (gnl|cdd|39859 : 347.0) no description available & (gnl|cdd|67666 : 190.0) no description available & (q27k34|pla2_orysa : 121.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (reliability: 1374.0) & (original description: Putative ML2, Description = Protein MEI2-like 2, PFAM = PF00076;PF00076;PF04059)' T '33.99' 'development.unspecified' 'niben101scf18061_31123-42060' '(at1g19270 : 655.0) DA1 (DA1); CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Ubiquitin interacting motif (InterPro:IPR003903), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: LIM domain-containing protein (TAIR:AT4G36860.1); Has 3538 Blast hits to 2617 proteins in 167 species: Archae - 0; Bacteria - 18; Metazoa - 3009; Fungi - 63; Plants - 177; Viruses - 0; Other Eukaryotes - 271 (source: NCBI BLink). & (gnl|cdd|36916 : 239.0) no description available & (reliability: 1234.0) & (original description: Putative DA1, Description = Protein DA1, PFAM = PF00412;PF12315)' T '33.99' 'development.unspecified' 'niben101scf18102_13367-16296' '(at3g15030 : 154.0) Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.; TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1). & (gnl|cdd|67262 : 116.0) no description available & (reliability: 294.0) & (original description: Putative cyc2c, Description = Transcription factor PCF8, PFAM = PF03634)' T '33.99' 'development.unspecified' 'niben101scf18182_49991-61025' '(at2g03060 : 145.0) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL30 is expressed in pollen.It forms heterodimers with other MICK family members.; AGAMOUS-like 30 (AGL30); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: pollen development; LOCATED IN: nucleus; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 65 (TAIR:AT1G18750.1); Has 6155 Blast hits to 6155 proteins in 757 species: Archae - 0; Bacteria - 0; Metazoa - 616; Fungi - 313; Plants - 5146; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative Mads1, Description = MADS box protein, PFAM = PF00319)' T '33.99' 'development.unspecified' 'niben101scf18268_90022-93978' '(at1g50420 : 328.0) Encodes a scarecrow-like protein (SCL3) Putative transcription factors interacting with the gene product of VHA-B1 (vacuolar ATPase subunit B1; as shown through yeast two-hybrid assay).; scarecrow-like 3 (SCL3); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 21 (TAIR:AT2G04890.1); Has 3106 Blast hits to 2488 proteins in 309 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 3100; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q7g7j6|slr1_orysa : 220.0) DELLA protein SLR1 (Protein SLENDER RICE1) (Gibberellic acid-insensitive mutant protein) (OsGAI) - Oryza sativa (Rice) & (gnl|cdd|67150 : 210.0) no description available & (reliability: 656.0) & (original description: Putative SCL3, Description = Scarecrow-like protein 3, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf19230_130635-156537' '(at5g63420 : 1159.0) embryo defective 2746 (emb2746); FUNCTIONS IN: hydrolase activity, DNA binding, catalytic activity; INVOLVED IN: metabolic process, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-lactamase-like (InterPro:IPR001279), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G38250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36352 : 438.0) no description available & (gnl|cdd|30940 : 408.0) no description available & (reliability: 2318.0) & (original description: Putative myb1, Description = Regulator of transcription that contains myb domains, PFAM = PF07521;PF12706;PF13837)' T '33.99' 'development.unspecified' 'niben101scf19358_132918-145607' '(at1g04770 : 318.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G48850.1); Has 226 Blast hits to 224 proteins in 29 species: Archae - 0; Bacteria - 22; Metazoa - 1; Fungi - 0; Plants - 173; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative At1g04770, Description = Protein SULFUR DEFICIENCY-INDUCED 2, PFAM = PF07719)' T '33.99' 'development.unspecified' 'niben101scf19386_22376-37758' '(at1g15750 : 1482.0) Encodes a protein with several WD40 repeats at the C-terminus and predicted protein-protein interaction domains at the N-terminus. Together with the TOPLESS-RELATED PROTEINS (TPRs), it is thought to be involved in transcriptional repression of root-promoting genes in the top help of the embryo during the transition stage of embryogenesis. The ability of IAA12 to repress transcription is diminished in a tpl-1 mutant background.; TOPLESS (TPL); FUNCTIONS IN: protein binding, transcription repressor activity, protein homodimerization activity; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, primary shoot apical meristem specification, jasmonic acid mediated signaling pathway; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TOPLESS-related 1 (TAIR:AT1G80490.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35487 : 119.0) no description available & (gnl|cdd|29257 : 105.0) no description available & (reliability: 2964.0) & (original description: Putative TPR2, Description = Protein TPR2, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf19480_1-3024' '(at2g47990 : 598.0) Encodes a transducin family nucleolar protein with six WD40 repeats that is most likely involved in 18S rRNA biogenesis. The slow progression of the gametophytic division cycles in swa1 suggested that the SWA1 protein is required for the normal progression of mitotic division cycles through the regulation of cell metabolism. Ubiquitously expressed throughout the plant.; SLOW WALKER1 (SWA1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), U3 small nucleolar RNA-associated protein 15, C-terminal (InterPro:IPR018983), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 33528 Blast hits to 20320 proteins in 654 species: Archae - 34; Bacteria - 4945; Metazoa - 12077; Fungi - 7782; Plants - 4404; Viruses - 6; Other Eukaryotes - 4280 (source: NCBI BLink). & (gnl|cdd|35531 : 514.0) no description available & (gnl|cdd|29257 : 150.0) no description available & (reliability: 1196.0) & (original description: Putative SWA1, Description = Protein SLOW WALKER 1, PFAM = PF09384;PF00400;PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf19504_34869-39118' '(at1g55570 : 793.0) SKU5 similar 12 (sks12); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 11 (TAIR:AT3G13390.1); Has 5441 Blast hits to 5412 proteins in 1035 species: Archae - 18; Bacteria - 1816; Metazoa - 269; Fungi - 1918; Plants - 1254; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (p29162|ntp3_tobac : 786.0) Pollen-specific protein NTP303 precursor - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36477 : 575.0) no description available & (gnl|cdd|87357 : 144.0) no description available & (reliability: 1480.0) & (original description: Putative p303, Description = L-ascorbate oxidase-like protein, PFAM = PF00394;PF07732;PF07731)' T '33.99' 'development.unspecified' 'niben101scf20035_11024-16556' '(at3g03270 : 192.0) Adenine nucleotide alpha hydrolases-like superfamily protein; INVOLVED IN: response to stress; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G53990.1); Has 4449 Blast hits to 4366 proteins in 896 species: Archae - 444; Bacteria - 2981; Metazoa - 119; Fungi - 123; Plants - 700; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (gnl|cdd|30165 : 82.9) no description available & (reliability: 384.0) & (original description: Putative USP1, Description = Universal stress protein 1, PFAM = PF00582)' T '33.99' 'development.unspecified' 'niben101scf20066_85285-89571' '(at2g28120 : 780.0) Major facilitator superfamily protein; INVOLVED IN: N-terminal protein myristoylation, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G39210.1); Has 3034 Blast hits to 2940 proteins in 680 species: Archae - 38; Bacteria - 1235; Metazoa - 42; Fungi - 225; Plants - 608; Viruses - 0; Other Eukaryotes - 886 (source: NCBI BLink). & (gnl|cdd|70288 : 294.0) no description available & (reliability: 1560.0) & (original description: Putative At2g28120, Description = At2g28120/F24D13.9, PFAM = PF06813)' T '33.99' 'development.unspecified' 'niben101scf20506_161666-165988' '(at4g17980 : 287.0) NAC domain containing protein 71 (NAC071); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 96 (TAIR:AT5G46590.1); Has 2972 Blast hits to 2965 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2972; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 220.0) no description available & (q7gcl7|nac74_orysa : 187.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 574.0) & (original description: Putative NH11, Description = Nam-like protein 11, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf20828_55628-58208' '(at5g13180 : 216.0) Encodes a NAC domain transcription factor that interacts with VND7 and negatively regulates xylem vessel formation.; NAC domain containing protein 83 (NAC083); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 41 (TAIR:AT2G33480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66085 : 171.0) no description available & (q52qh4|nac68_orysa : 148.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 432.0) & (original description: Putative NAC2, Description = NAC transcription factor, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf21026_9544-14059' '(at5g41920 : 449.0) GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G54220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|67150 : 287.0) no description available & (q8s4w7|gai1_vitvi : 192.0) DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1) - Vitis vinifera (Grape) & (reliability: 898.0) & (original description: Putative SCL23, Description = Scarecrow-like protein 23, PFAM = PF03514)' T '33.99' 'development.unspecified' 'niben101scf21107_14453-33315' '(at3g13300 : 1266.0) Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development.; VARICOSE (VCS); FUNCTIONS IN: protein homodimerization activity, nucleotide binding; INVOLVED IN: mRNA catabolic process, deadenylation-independent decapping of nuclear-transcribed mRNA, leaf morphogenesis; LOCATED IN: cytosol, nucleus, cytoplasmic mRNA processing body; EXPRESSED IN: whole plant, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: varicose-related (TAIR:AT3G13290.1); Has 885 Blast hits to 799 proteins in 264 species: Archae - 2; Bacteria - 218; Metazoa - 230; Fungi - 185; Plants - 114; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|37127 : 818.0) no description available & (reliability: 2532.0) & (original description: Putative VCS, Description = Enhancer of mRNA-decapping protein 4, PFAM = PF16529)' T '33.99' 'development.unspecified' 'niben101scf21935_3674-55656' '(at5g25220 : 379.0) A member of class II knotted1-like homeobox gene family (together with KNAT4 and KNAT5). Expressed in: hypocotyl-root boundary, anther-filament junction in flowers, ovule-funiculus and peduncle-silique boundaries, petioles and root. Light-regulated expression with differential response to red/far-red light. KNAT3 promoter activity showed cell-type specific pattern along longitudinal root axis, restricted mainly to the differentiation zone of the root, namely in the cortex and pericycle. Not detected in lateral root primordia; KNOTTED1-like homeobox gene 3 (KNAT3); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to light stimulus, detection of cytokinin stimulus, cellular response to cytokine stimulus; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 35 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ELK (InterPro:IPR005539), KNOX1 (InterPro:IPR005540), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), KNOX2 (InterPro:IPR005541), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 4 (TAIR:AT5G11060.1); Has 6026 Blast hits to 5994 proteins in 341 species: Archae - 0; Bacteria - 2; Metazoa - 2058; Fungi - 371; Plants - 3387; Viruses - 4; Other Eukaryotes - 204 (source: NCBI BLink). & (o04136|knap3_maldo : 369.0) Homeobox protein knotted-1-like 3 (KNAP3) - Malus domestica (Apple) (Malus sylvestris) & (gnl|cdd|35992 : 162.0) no description available & (reliability: 690.0) & (original description: Putative HOS58, Description = Homeobox protein knotted-1-like 2, PFAM = PF05920;PF03790;PF03791)' T '33.99' 'development.unspecified' 'niben101scf21969_490-3773' '(at1g75520 : 206.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.; SHI-related sequence 5 (SRS5); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2); Has 299 Blast hits to 299 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 180; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|68707 : 191.0) no description available & (reliability: 382.0) & (original description: Putative SRS7, Description = Protein SHI RELATED SEQUENCE 7, PFAM = PF05142)' T '33.99' 'development.unspecified' 'niben101scf23098_2197-6158' '(at1g61040 : 508.0) Encodes a yeast Paf1C subunit homolog required for the expression of the MADS box gene FLC and other members of the FLC/MAF MADS-box gene family.; vernalization independence 5 (VIP5); FUNCTIONS IN: DNA binding; INVOLVED IN: positive regulation of transcription, DNA-dependent, negative regulation of flower development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plus-3 domain, subgroup (InterPro:IPR018144), Plus-3 (InterPro:IPR004343); Has 7244 Blast hits to 3723 proteins in 490 species: Archae - 2; Bacteria - 3364; Metazoa - 2087; Fungi - 627; Plants - 250; Viruses - 32; Other Eukaryotes - 882 (source: NCBI BLink). & (gnl|cdd|37613 : 252.0) no description available & (gnl|cdd|34887 : 108.0) no description available & (reliability: 1016.0) & (original description: Putative VIP5, Description = Protein RTF1 homolog, PFAM = PF03126)' T '33.99' 'development.unspecified' 'niben101scf24758_131650-137601' '(at5g06710 : 192.0) Homeobox-leucine zipper protein.; homeobox from Arabidopsis thaliana (HAT14); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT4G17460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35704 : 140.0) no description available & (gnl|cdd|47667 : 85.4) no description available & (reliability: 384.0) & (original description: Putative HAT14, Description = Homeobox-leucine zipper protein HAT14, PFAM = PF02183;PF00046)' T '33.99' 'development.unspecified' 'niben101scf26315_9196-29343' '(at5g13570 : 439.0) Encodes DCP2 with mRNA decapping activity. DCP2 forms a mRNA decapping complex with DCP1 (At1g08370) and VCS (VARICOSE) (At3g13300). Recombinant DCP2 is enzymatically active in vitro, generating from capped mRNAs m7GDP, and 5í-phosphorylated mRNAs. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP1.; decapping 2 (DCP2); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Dcp2, box A (InterPro:IPR007722), NUDIX hydrolase domain (InterPro:IPR000086). & (gnl|cdd|38148 : 268.0) no description available & (gnl|cdd|72892 : 206.0) no description available & (reliability: 878.0) & (original description: Putative DCP2, Description = mRNA-decapping enzyme subunit 2, PFAM = PF00293;PF05026)' T '33.99' 'development.unspecified' 'niben101scf26781_12420-32943' '(at2g19430 : 428.0) This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase. Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.; DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1 (DWA1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 25005 Blast hits to 14147 proteins in 619 species: Archae - 64; Bacteria - 4449; Metazoa - 9459; Fungi - 5655; Plants - 2500; Viruses - 0; Other Eukaryotes - 2878 (source: NCBI BLink). & (gnl|cdd|35868 : 264.0) no description available & (gnl|cdd|29257 : 89.7) no description available & (reliability: 856.0) & (original description: Putative THO6, Description = THO complex subunit 6, PFAM = PF00400;PF00400)' T '33.99' 'development.unspecified' 'niben101scf27265_15157-18720' '(q9xhl7|tctp_tobac : 269.0) Translationally-controlled tumor protein homolog (TCTP) - Nicotiana tabacum (Common tobacco) & (at3g16640 : 216.0) Encodes a protein homologous to translationally controlled tumor protein (TCTP) from Drosophila. In flies, TCTP functions guanine nucleotide exchange factor in the TOR signaling pathway. TCTP is expressed throughout the plant with highest levels seen in meristematic regions of the shoot and root. Loss of function alleles are not transmitted through the male gametophyte due to defects in pollen tube growth. Hypomorphs, generated through RNAi, are dwarf and have smaller cells. These plants also have defects in lateral and primary root growth as well as root hair growth. The phenotypes are similar to TOR mutants suggesting that TCTP functions in the is pathway in Arabidopsis as well.; translationally controlled tumor protein (TCTP); INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Translationally controlled tumour protein (InterPro:IPR018105), Mss4/translationally controlled tumour-associated TCTP (InterPro:IPR011323), Translationally controlled tumour protein, conserved site (InterPro:IPR018103), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: Methionine sulfoxide reductase (MSS4-like) family protein (TAIR:AT3G05540.1); Has 867 Blast hits to 867 proteins in 310 species: Archae - 0; Bacteria - 0; Metazoa - 452; Fungi - 160; Plants - 158; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|85059 : 197.0) no description available & (gnl|cdd|36938 : 184.0) no description available & (reliability: 432.0) & (original description: Putative TCTP, Description = Translationally-controlled tumor protein homolog, PFAM = PF00838)' T '33.99' 'development.unspecified' 'niben101scf27945_59694-66598' '(at3g49530 : 258.0) Transcription factor that serves as a molecular link between cold signals and pathogen resistance responses. Undergoes proteolytic processing triggered by cold-induced changes in membrane fluidity.; NAC domain containing protein 62 (NAC062); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: TCV-interacting protein (TAIR:AT5G24590.2); Has 2933 Blast hits to 2926 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2931; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66085 : 203.0) no description available & (q5z6b6|nac76_orysa : 159.0) NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice) & (reliability: 516.0) & (original description: Putative NAC06, Description = NAC domain-containing protein, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf29780_37044-41104' '(at2g23810 : 168.0) Member of TETRASPANIN family; tetraspanin8 (TET8); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, conserved site (InterPro:IPR018503), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: tetraspanin9 (TAIR:AT4G30430.1); Has 603 Blast hits to 600 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 0; Plants - 433; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative TET8, Description = Senescence-associated protein, PFAM = PF00335)' T '33.99' 'development.unspecified' 'niben101scf31270_18315-22259' '(at1g21460 : 302.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT5G53190.1); Has 988 Blast hits to 930 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 221; Fungi - 0; Plants - 643; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36836 : 191.0) no description available & (gnl|cdd|86234 : 85.6) no description available & (reliability: 604.0) & (original description: Putative SWEET1, Description = Bidirectional sugar transporter SWEET1, PFAM = PF03083;PF03083)' T '33.99' 'development.unspecified' 'niben101scf31780_11888-45390' '(at1g13120 : 347.0) embryo defective 1745 (emb1745); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nuclear pore; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GLE1-like (InterPro:IPR012476); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05523.1); Has 36705 Blast hits to 24548 proteins in 2114 species: Archae - 242; Bacteria - 8583; Metazoa - 12421; Fungi - 3107; Plants - 1525; Viruses - 221; Other Eukaryotes - 10606 (source: NCBI BLink). & (gnl|cdd|37623 : 228.0) no description available & (gnl|cdd|87377 : 163.0) no description available & (reliability: 694.0) & (original description: Putative GLE1, Description = Protein GLE1, PFAM = PF07817)' T '33.99' 'development.unspecified' 'niben101scf39126_3549-8165' '(at4g28530 : 263.0) NAC domain containing protein 74 (NAC074); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT5G53950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66085 : 189.0) no description available & (q5cd17|nac77_orysa : 181.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 526.0) & (original description: Putative NAC17, Description = NAC domain protein 17, PFAM = PF02365)' T '33.99' 'development.unspecified' 'niben101scf39364_3572-8219' '(gnl|cdd|70383 : 454.0) no description available & (at2g17840 : 423.0) Identified as drought-inducible gene by differential hybridization. Upregulated by high light, drought, cold and salt stress determined by microarray analysis.; EARLY-RESPONSIVE TO DEHYDRATION 7 (ERD7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, response to high light intensity, response to salt stress, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Senescence/spartin-associated (InterPro:IPR009686); BEST Arabidopsis thaliana protein match is: Senescence/dehydration-associated protein-related (TAIR:AT4G35985.1); Has 250 Blast hits to 250 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 66; Fungi - 39; Plants - 134; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 846.0) & (original description: Putative ERD7, Description = Probable senescence related protein, PFAM = PF06911)' T '34' 'transport' 'nbv0.5scaffold191_321936-347103' '(at3g08960 : 1380.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G26170.1); Has 1304 Blast hits to 1268 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 515; Fungi - 472; Plants - 189; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|37204 : 752.0) no description available & (gnl|cdd|35216 : 150.0) no description available & (reliability: 2760.0) & (original description: Putative At3g08960, Description = ARM repeat superfamily protein, PFAM = PF03810)' T '34' 'transport' 'nbv0.5scaffold1193_304766-313871' '(at2g28315 : 474.0) Nucleotide/sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G06890.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36654 : 180.0) no description available & (gnl|cdd|66803 : 88.7) no description available & (reliability: 948.0) & (original description: Putative At1g06890, Description = Uncharacterized membrane protein At1g06890, PFAM = PF03151)' T '34' 'transport' 'niben101scf01721_806508-813977' '(at4g31600 : 379.0) UDP-N-acetylglucosamine (UAA) transporter family; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: Nucleotide/sugar transporter family protein (TAIR:AT4G32272.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36657 : 225.0) no description available & (reliability: 758.0) & (original description: Putative Sb10g005990, Description = Putative uncharacterized protein Sb10g005990, PFAM = PF03151)' T '34' 'transport' 'niben101scf02165_212718-222961' '(at2g28315 : 280.0) Nucleotide/sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G06890.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36654 : 109.0) no description available & (gnl|cdd|66803 : 92.2) no description available & (reliability: 560.0) & (original description: Putative UXT1, Description = Nucleotide/sugar transporter family protein, PFAM = PF03151)' T '34' 'transport' 'niben101scf03202_458640-487824' '(at3g08960 : 1400.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G26170.1); Has 1304 Blast hits to 1268 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 515; Fungi - 472; Plants - 189; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|37204 : 755.0) no description available & (gnl|cdd|35216 : 111.0) no description available & (reliability: 2800.0) & (original description: Putative At3g08960, Description = ARM repeat superfamily protein, PFAM = PF03810)' T '34' 'transport' 'niben101scf03614_259143-271453' '(at2g28315 : 474.0) Nucleotide/sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G06890.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36654 : 179.0) no description available & (gnl|cdd|66803 : 87.5) no description available & (reliability: 948.0) & (original description: Putative At1g06890, Description = Uncharacterized membrane protein At1g06890, PFAM = PF03151)' T '34.1' 'transport.p- and v-ATPases' 'nbv0.3scaffold12325_42335-44634' '(at5g04930 : 469.0) Encodes a putative aminophospholipid translocase (p-type ATPase) involved in chilling response.; aminophospholipid ATPase 1 (ALA1); FUNCTIONS IN: protein binding, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, phospholipid transport, ATP biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), HAD superfamily hydrolase-like, type 3 (InterPro:IPR013200); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT3G13900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35427 : 295.0) no description available & (gnl|cdd|30822 : 96.6) no description available & (reliability: 938.0) & (original description: Putative ALA1, Description = Phospholipid-transporting ATPase, PFAM = PF00122;PF16209)' T '34.1' 'transport.p- and v-ATPases' 'nbv0.3scaffold20406_2929-5996' '(at3g12740 : 507.0) Physically interacts with ALA3, and is required for the phospholipid translocase activity of ALA3.; ALA-interacting subunit 1 (ALIS1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284, transmembrane eukaryotic (InterPro:IPR005045); BEST Arabidopsis thaliana protein match is: LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein (TAIR:AT1G54320.1); Has 864 Blast hits to 864 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 234; Plants - 160; Viruses - 0; Other Eukaryotes - 218 (source: NCBI BLink). & (gnl|cdd|38163 : 411.0) no description available & (gnl|cdd|67019 : 305.0) no description available & (reliability: 1014.0) & (original description: Putative ALIS1, Description = ALA-interacting subunit 1, PFAM = PF03381)' T '34.1' 'transport.p- and v-ATPases' 'nbv0.3scaffold30048_15776-24878' '(p09469|vata_dauca : 1173.0) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14) (V-ATPase subunit A) (Vacuolar proton pump subunit alpha) (V-ATPase 69 kDa subunit) - Daucus carota (Carrot) & (at1g78900 : 1135.0) Encodes catalytic subunit A of the vacuolar ATP synthase. Mutants are devoid of vacuolar ATPase activity as subunit A is encoded only by this gene and show strong defects in male gametophyte development and in Golgi stack morphology.; vacuolar ATP synthase subunit A (VHA-A); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism, ATP binding; INVOLVED IN: response to salt stress, proton transport, Golgi organization, pollen development; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194), ATPase, V1 complex, subunit A (InterPro:IPR005725); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36566 : 1059.0) no description available & (gnl|cdd|31349 : 807.0) no description available & (reliability: 2270.0) & (original description: Putative atpA, Description = V-type proton ATPase catalytic subunit A, PFAM = PF00006;PF02874;PF16886;PF16886)' T '34.1' 'transport.p- and v-ATPases' 'nbv0.3scaffold39780_10725-18725' '(at1g79450 : 462.0) ALA-interacting subunit 5 (ALIS5); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid lumen, plasma membrane, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284, transmembrane eukaryotic (InterPro:IPR005045); BEST Arabidopsis thaliana protein match is: LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein (TAIR:AT1G16360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38163 : 373.0) no description available & (gnl|cdd|67019 : 280.0) no description available & (reliability: 924.0) & (original description: Putative Os05g0529900, Description = Os05g0529900 protein, PFAM = PF03381)' T '34.1' 'transport.p- and v-ATPases' 'nbv0.3scaffold44300_13381-17476' '(q03194|pma4_nicpl : 1228.0) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|35426 : 1100.0) no description available & (at2g18960 : 1086.0) Encodes a plasma membrane proton ATPase. Mutants have a reduced ability to close their stomata in response to drought and are affected in stomatal but not seed responsiveness to ABA.; H(+)-ATPase 1 (HA1); FUNCTIONS IN: protein binding, ATPase activity, hydrogen-exporting ATPase activity, phosphorylative mechanism; INVOLVED IN: response to water deprivation, proton transport, response to abscisic acid stimulus, regulation of stomatal movement; LOCATED IN: nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 2 (TAIR:AT4G30190.1); Has 37421 Blast hits to 33000 proteins in 3185 species: Archae - 713; Bacteria - 23967; Metazoa - 3870; Fungi - 2594; Plants - 1874; Viruses - 3; Other Eukaryotes - 4400 (source: NCBI BLink). & (gnl|cdd|30822 : 306.0) no description available & (reliability: 2146.0) & (original description: Putative a1, Description = Plasma membrane ATPase, PFAM = PF00702)' T '34.1' 'transport.p- and v-ATPases' 'nbv0.3scaffold54190_7083-25249' '(at1g59820 : 1909.0) Encodes a phospholipid translocase. Involved in secretory vesicle formation from trans-Golgi in peripheral columella cells at the root tip. Mutants have short primary roots and grow slower.; aminophospholipid ATPase 3 (ALA3); FUNCTIONS IN: phospholipid transporter activity, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: Golgi vesicle budding, shoot development, root development; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G17500.1); Has 12776 Blast hits to 11290 proteins in 1545 species: Archae - 148; Bacteria - 4231; Metazoa - 2905; Fungi - 2108; Plants - 937; Viruses - 1; Other Eukaryotes - 2446 (source: NCBI BLink). & (gnl|cdd|35427 : 1369.0) no description available & (gnl|cdd|30822 : 388.0) no description available & (q6atv4|aca2_orysa : 101.0) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (reliability: 3818.0) & (original description: Putative ALA3, Description = Phospholipid-transporting ATPase 3, PFAM = PF16209;PF13246;PF16212)' T '34.1' 'transport.p- and v-ATPases' 'nbv0.3scaffold61995_2762-9950' '(at1g17500 : 1830.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, ATP biosynthetic process, phospholipid transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G72700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35427 : 1525.0) no description available & (gnl|cdd|30822 : 282.0) no description available & (reliability: 3602.0) & (original description: Putative ALA4, Description = Probable phospholipid-transporting ATPase 4, PFAM = PF16212;PF13246;PF16209)' T '34.1' 'transport.p- and v-ATPases' 'nbv0.3scaffold66165_1-10248' '(at4g39080 : 1110.0) Vacuolar proton ATPase subunit VHA-a isoform 3. Localized in the tonoplast.; vacuolar proton ATPase A3 (VHA-A3); FUNCTIONS IN: ATPase activity, hydrogen-translocating pyrophosphatase activity; INVOLVED IN: cellular response to nutrient levels, ATP synthesis coupled proton transport; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V0/A0 complex, 116kDa subunit (InterPro:IPR002490); BEST Arabidopsis thaliana protein match is: vacuolar proton ATPase A2 (TAIR:AT2G21410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37400 : 967.0) no description available & (gnl|cdd|85492 : 527.0) no description available & (reliability: 2220.0) & (original description: Putative vatM, Description = V-type proton ATPase subunit a, PFAM = PF01496)' T '34.1' 'transport.p- and v-ATPases' 'nbv0.3scaffold81713_1-6827' '(at2g21410 : 627.0) Vacuolar proton ATPase subunit VHA-a isoform 2. Localized in the tonoplast. Required for efficient nutrient storage but not for sodium accumulation.; vacuolar proton ATPase A2 (VHA-A2); FUNCTIONS IN: ATPase activity, hydrogen-translocating pyrophosphatase activity; INVOLVED IN: cellular response to nutrient levels, ATP synthesis coupled proton transport; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V0/A0 complex, 116kDa subunit (InterPro:IPR002490); BEST Arabidopsis thaliana protein match is: vacuolar proton ATPase A3 (TAIR:AT4G39080.1); Has 2867 Blast hits to 2293 proteins in 720 species: Archae - 334; Bacteria - 1213; Metazoa - 663; Fungi - 202; Plants - 115; Viruses - 0; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|37400 : 579.0) no description available & (gnl|cdd|85492 : 353.0) no description available & (reliability: 1254.0) & (original description: Putative vatM, Description = V-type proton ATPase subunit a, PFAM = PF01496)' T '34.1' 'transport.p- and v-ATPases' 'nbv0.5scaffold954_146208-233355' '(at5g55290 : 90.1) ATPase, V0 complex, subunit E; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: ATP hydrolysis coupled proton transport; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V0 complex, subunit E (InterPro:IPR008389); BEST Arabidopsis thaliana protein match is: ATPase, V0 complex, subunit E (TAIR:AT4G26710.2); Has 270 Blast hits to 270 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 171; Fungi - 14; Plants - 67; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative VMA9, Description = ATPase, V0 complex, subunit E, PFAM = PF05493)' T '34.1' 'transport.p- and v-ATPases' 'nbv0.5scaffold1182_13968-20745' '(at5g04930 : 1566.0) Encodes a putative aminophospholipid translocase (p-type ATPase) involved in chilling response.; aminophospholipid ATPase 1 (ALA1); FUNCTIONS IN: protein binding, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, phospholipid transport, ATP biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), HAD superfamily hydrolase-like, type 3 (InterPro:IPR013200); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT3G13900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35427 : 1036.0) no description available & (gnl|cdd|30822 : 378.0) no description available & (reliability: 3132.0) & (original description: Putative ALA1, Description = Phospholipid-transporting ATPase 1, PFAM = PF13246;PF16212;PF00122;PF16209)' T '34.1' 'transport.p- and v-ATPases' 'nbv0.5scaffold1234_2753-14338' '(q08435|pma1_nicpl : 1748.0) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g62670 : 1649.0) H(+)-ATPase 11 (HA11); FUNCTIONS IN: ATPase activity; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 4 (TAIR:AT3G47950.1); Has 36311 Blast hits to 32678 proteins in 3159 species: Archae - 691; Bacteria - 22958; Metazoa - 3912; Fungi - 2478; Plants - 1926; Viruses - 3; Other Eukaryotes - 4343 (source: NCBI BLink). & (gnl|cdd|35426 : 1630.0) no description available & (gnl|cdd|30822 : 506.0) no description available & (reliability: 3298.0) & (original description: Putative AHA4, Description = ATPase 4, plasma membrane-type, PFAM = PF00122;PF00690;PF00702)' T '34.1' 'transport.p- and v-ATPases' 'nbv0.5scaffold1496_299405-314410' '(at2g28520 : 1280.0) Vacuolar proton ATPase subunit VHA-a isoform 1. Localized in the trans-Golgi network.; vacuolar proton ATPase A1 (VHA-A1); FUNCTIONS IN: ATPase activity; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: trans-Golgi network transport vesicle membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V0/A0 complex, 116kDa subunit (InterPro:IPR002490); BEST Arabidopsis thaliana protein match is: vacuolar proton ATPase A2 (TAIR:AT2G21410.1); Has 2824 Blast hits to 2207 proteins in 678 species: Archae - 341; Bacteria - 1172; Metazoa - 652; Fungi - 200; Plants - 117; Viruses - 0; Other Eukaryotes - 342 (source: NCBI BLink). & (gnl|cdd|37400 : 1033.0) no description available & (gnl|cdd|85492 : 597.0) no description available & (reliability: 2560.0) & (original description: Putative vatM, Description = V-type proton ATPase subunit a, PFAM = PF01496)' T '34.1' 'transport.p- and v-ATPases' 'nbv0.5scaffold1663_190130-206801' '(at4g39080 : 1191.0) Vacuolar proton ATPase subunit VHA-a isoform 3. Localized in the tonoplast.; vacuolar proton ATPase A3 (VHA-A3); FUNCTIONS IN: ATPase activity, hydrogen-translocating pyrophosphatase activity; INVOLVED IN: cellular response to nutrient levels, ATP synthesis coupled proton transport; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V0/A0 complex, 116kDa subunit (InterPro:IPR002490); BEST Arabidopsis thaliana protein match is: vacuolar proton ATPase A2 (TAIR:AT2G21410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37400 : 1047.0) no description available & (gnl|cdd|85492 : 594.0) no description available & (reliability: 2382.0) & (original description: Putative vatM, Description = V-type proton ATPase subunit a, PFAM = PF01496)' T '34.1' 'transport.p- and v-ATPases' 'nbv0.5scaffold2461_38583-41662' '(at3g12740 : 486.0) Physically interacts with ALA3, and is required for the phospholipid translocase activity of ALA3.; ALA-interacting subunit 1 (ALIS1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284, transmembrane eukaryotic (InterPro:IPR005045); BEST Arabidopsis thaliana protein match is: LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein (TAIR:AT1G54320.1); Has 864 Blast hits to 864 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 234; Plants - 160; Viruses - 0; Other Eukaryotes - 218 (source: NCBI BLink). & (gnl|cdd|38163 : 401.0) no description available & (gnl|cdd|67019 : 298.0) no description available & (reliability: 972.0) & (original description: Putative chat-1, Description = CDC50 family protein chat-1, PFAM = PF03381)' T '34.1' 'transport.p- and v-ATPases' 'nbv0.5scaffold2695_210565-228809' '(at1g59820 : 1975.0) Encodes a phospholipid translocase. Involved in secretory vesicle formation from trans-Golgi in peripheral columella cells at the root tip. Mutants have short primary roots and grow slower.; aminophospholipid ATPase 3 (ALA3); FUNCTIONS IN: phospholipid transporter activity, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: Golgi vesicle budding, shoot development, root development; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G17500.1); Has 12776 Blast hits to 11290 proteins in 1545 species: Archae - 148; Bacteria - 4231; Metazoa - 2905; Fungi - 2108; Plants - 937; Viruses - 1; Other Eukaryotes - 2446 (source: NCBI BLink). & (gnl|cdd|35427 : 1425.0) no description available & (gnl|cdd|30822 : 398.0) no description available & (q6atv4|aca2_orysa : 93.6) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (reliability: 3950.0) & (original description: Putative ALA3, Description = Phospholipid-transporting ATPase 3, PFAM = PF13246;PF16212;PF16209)' T '34.1' 'transport.p- and v-ATPases' 'nbv0.5scaffold4018_13838-21740' '(gnl|cdd|35426 : 1638.0) no description available & (at3g42640 : 1556.0) H(+)-ATPase 8 (HA8); FUNCTIONS IN: ATPase activity; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 6 (TAIR:AT2G07560.1); Has 37108 Blast hits to 32939 proteins in 3205 species: Archae - 721; Bacteria - 23855; Metazoa - 3927; Fungi - 2384; Plants - 1873; Viruses - 3; Other Eukaryotes - 4345 (source: NCBI BLink). & (q03194|pma4_nicpl : 1544.0) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|30822 : 510.0) no description available & (reliability: 3112.0) & (original description: Putative AHA8, Description = ATPase 8, plasma membrane-type, PFAM = PF00690;PF00702;PF00122)' T '34.1' 'transport.p- and v-ATPases' 'nbv0.5scaffold4300_150470-195086' '(at5g44240 : 1937.0) aminophospholipid ATPase 2 (ALA2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, phospholipid transport, ATP biosynthetic process; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: aminophospholipid ATPase 1 (TAIR:AT5G04930.1). & (gnl|cdd|35427 : 923.0) no description available & (gnl|cdd|30822 : 403.0) no description available & (q65x71|aca6_orysa : 91.7) Probable calcium-transporting ATPase 6, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 6) - Oryza sativa (Rice) & (reliability: 3874.0) & (original description: Putative ALA2, Description = Phospholipid-transporting ATPase 2, PFAM = PF16209;PF16212;PF00122;PF00702)' T '34.1' 'transport.p- and v-ATPases' 'nbv0.5scaffold4607_112402-125765' '(at2g28520 : 1271.0) Vacuolar proton ATPase subunit VHA-a isoform 1. Localized in the trans-Golgi network.; vacuolar proton ATPase A1 (VHA-A1); FUNCTIONS IN: ATPase activity; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: trans-Golgi network transport vesicle membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V0/A0 complex, 116kDa subunit (InterPro:IPR002490); BEST Arabidopsis thaliana protein match is: vacuolar proton ATPase A2 (TAIR:AT2G21410.1); Has 2824 Blast hits to 2207 proteins in 678 species: Archae - 341; Bacteria - 1172; Metazoa - 652; Fungi - 200; Plants - 117; Viruses - 0; Other Eukaryotes - 342 (source: NCBI BLink). & (gnl|cdd|37400 : 1032.0) no description available & (gnl|cdd|85492 : 585.0) no description available & (reliability: 2542.0) & (original description: Putative vatM, Description = V-type proton ATPase subunit a, PFAM = PF01496)' T '34.1' 'transport.p- and v-ATPases' 'niben044scf00006891ctg003_6001-17115' '(at3g12740 : 496.0) Physically interacts with ALA3, and is required for the phospholipid translocase activity of ALA3.; ALA-interacting subunit 1 (ALIS1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284, transmembrane eukaryotic (InterPro:IPR005045); BEST Arabidopsis thaliana protein match is: LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein (TAIR:AT1G54320.1); Has 864 Blast hits to 864 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 234; Plants - 160; Viruses - 0; Other Eukaryotes - 218 (source: NCBI BLink). & (gnl|cdd|38163 : 398.0) no description available & (gnl|cdd|67019 : 297.0) no description available & (reliability: 992.0) & (original description: Putative ALIS1, Description = ALA-interacting subunit 1, PFAM = PF03381)' T '34.1' 'transport.p- and v-ATPases' 'niben044scf00007049ctg000_1862-5760' '(o82703|vatg2_tobac : 120.0) Vacuolar ATP synthase subunit G 2 (EC 3.6.3.14) (V-ATPase G subunit 2) (Vacuolar proton pump G subunit 2) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|86264 : 86.0) no description available & (at3g01390 : 81.3) Subunit G of the vacuolar membrane ATPAse complex; vacuolar membrane ATPase 10 (VMA10); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: ATP hydrolysis coupled proton transport; LOCATED IN: plasma membrane, proton-transporting two-sector ATPase complex, vacuole, plant-type vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar (H+)-ATPase G subunit (InterPro:IPR005124); BEST Arabidopsis thaliana protein match is: vacuolar ATP synthase subunit G2 (TAIR:AT4G23710.1); Has 621 Blast hits to 619 proteins in 206 species: Archae - 2; Bacteria - 17; Metazoa - 288; Fungi - 124; Plants - 126; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|36983 : 80.7) no description available & (reliability: 162.6) & (original description: Putative VATG2, Description = V-type proton ATPase subunit G 2, PFAM = PF03179)' T '34.1' 'transport.p- and v-ATPases' 'niben044scf00007710ctg004_2042-7936' '(at1g12840 : 443.0) Encodes subunit C of the vacuolar H(+)-ATPase (V-ATPase). Bound and phosphorylated by AtWNK8.; DE-ETIOLATED 3 (DET3); FUNCTIONS IN: proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: lignin biosynthetic process, regulation of carbohydrate biosynthetic process, unidimensional cell growth; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1 complex, subunit C (InterPro:IPR004907); Has 563 Blast hits to 541 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 263; Fungi - 140; Plants - 72; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (q9scb9|vatc_horvu : 400.0) Vacuolar ATP synthase subunit C (EC 3.6.3.14) (V-ATPase C subunit) (Vacuolar proton pump C subunit) - Hordeum vulgare (Barley) & (gnl|cdd|38120 : 331.0) no description available & (gnl|cdd|86278 : 329.0) no description available & (reliability: 886.0) & (original description: Putative ATC, Description = V-type proton ATPase subunit C, PFAM = PF03223)' T '34.1' 'transport.p- and v-ATPases' 'niben044scf00008129ctg011_15667-18874' '(at3g12740 : 511.0) Physically interacts with ALA3, and is required for the phospholipid translocase activity of ALA3.; ALA-interacting subunit 1 (ALIS1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284, transmembrane eukaryotic (InterPro:IPR005045); BEST Arabidopsis thaliana protein match is: LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein (TAIR:AT1G54320.1); Has 864 Blast hits to 864 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 234; Plants - 160; Viruses - 0; Other Eukaryotes - 218 (source: NCBI BLink). & (gnl|cdd|38163 : 414.0) no description available & (gnl|cdd|67019 : 310.0) no description available & (reliability: 1022.0) & (original description: Putative ALIS1, Description = ALA-interacting subunit 1, PFAM = PF03381)' T '34.1' 'transport.p- and v-ATPases' 'niben044scf00022293ctg001_1-1812' '(gnl|cdd|86264 : 85.2) no description available & (o82702|vatg1_tobac : 81.6) Vacuolar ATP synthase subunit G 1 (EC 3.6.3.14) (V-ATPase G subunit 1) (Vacuolar proton pump G subunit 1) - Nicotiana tabacum (Common tobacco) & (at4g25950 : 80.9) V-ATPase G-subunit like protein; vacuolar ATP synthase G3 (VATG3); FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances; INVOLVED IN: proton transport; LOCATED IN: vacuole; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Vacuolar (H+)-ATPase G subunit (InterPro:IPR005124); BEST Arabidopsis thaliana protein match is: vacuolar membrane ATPase 10 (TAIR:AT3G01390.2); Has 543 Blast hits to 543 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 270; Fungi - 119; Plants - 123; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative VAG1, Description = V-type proton ATPase subunit G, PFAM = PF03179)' T '34.1' 'transport.p- and v-ATPases' 'niben044scf00040208ctg000_22939-32078' '(at3g27870 : 1758.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, ATP biosynthetic process, phospholipid transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G68710.1); Has 13753 Blast hits to 12595 proteins in 1702 species: Archae - 134; Bacteria - 4536; Metazoa - 3490; Fungi - 2070; Plants - 981; Viruses - 3; Other Eukaryotes - 2539 (source: NCBI BLink). & (gnl|cdd|35427 : 1479.0) no description available & (gnl|cdd|30822 : 417.0) no description available & (reliability: 3516.0) & (original description: Putative ALA8, Description = Probable phospholipid-transporting ATPase 8, PFAM = PF16212;PF08282;PF00122;PF13246;PF16209)' T '34.1' 'transport.p- and v-ATPases' 'niben044scf00040481ctg002_1297-6454' '(at5g04930 : 709.0) Encodes a putative aminophospholipid translocase (p-type ATPase) involved in chilling response.; aminophospholipid ATPase 1 (ALA1); FUNCTIONS IN: protein binding, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, phospholipid transport, ATP biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), HAD superfamily hydrolase-like, type 3 (InterPro:IPR013200); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT3G13900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35427 : 633.0) no description available & (gnl|cdd|30822 : 243.0) no description available & (reliability: 1418.0) & (original description: Putative ATP10D, Description = Probable phospholipid-transporting ATPase VD, PFAM = PF16212;PF13246)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf00270_433763-439937' '(at5g55290 : 90.5) ATPase, V0 complex, subunit E; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: ATP hydrolysis coupled proton transport; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V0 complex, subunit E (InterPro:IPR008389); BEST Arabidopsis thaliana protein match is: ATPase, V0 complex, subunit E (TAIR:AT4G26710.2); Has 270 Blast hits to 270 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 171; Fungi - 14; Plants - 67; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative VMA9, Description = ATPase, V0 complex, subunit E, PFAM = PF05493)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf00409_370313-374769' '(o82702|vatg1_tobac : 131.0) Vacuolar ATP synthase subunit G 1 (EC 3.6.3.14) (V-ATPase G subunit 1) (Vacuolar proton pump G subunit 1) - Nicotiana tabacum (Common tobacco) & (at3g01390 : 95.5) Subunit G of the vacuolar membrane ATPAse complex; vacuolar membrane ATPase 10 (VMA10); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: ATP hydrolysis coupled proton transport; LOCATED IN: plasma membrane, proton-transporting two-sector ATPase complex, vacuole, plant-type vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar (H+)-ATPase G subunit (InterPro:IPR005124); BEST Arabidopsis thaliana protein match is: vacuolar ATP synthase subunit G2 (TAIR:AT4G23710.1); Has 621 Blast hits to 619 proteins in 206 species: Archae - 2; Bacteria - 17; Metazoa - 288; Fungi - 124; Plants - 126; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|86264 : 91.0) no description available & (gnl|cdd|36983 : 87.3) no description available & (reliability: 191.0) & (original description: Putative VATG1, Description = V-type proton ATPase subunit G 1, PFAM = PF03179)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf00465_178252-185819' '(at1g68710 : 1835.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, phospholipid transport, ATP biosynthetic process; LOCATED IN: mitochondrion, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G26130.2); Has 13629 Blast hits to 12474 proteins in 1825 species: Archae - 135; Bacteria - 4718; Metazoa - 3129; Fungi - 2128; Plants - 1014; Viruses - 3; Other Eukaryotes - 2502 (source: NCBI BLink). & (gnl|cdd|35427 : 1554.0) no description available & (gnl|cdd|30822 : 433.0) no description available & (reliability: 3602.0) & (original description: Putative ALA9, Description = Putative phospholipid-transporting ATPase 9, PFAM = PF16209;PF13246;PF16212)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf00482_884315-896599' '(at2g28520 : 1276.0) Vacuolar proton ATPase subunit VHA-a isoform 1. Localized in the trans-Golgi network.; vacuolar proton ATPase A1 (VHA-A1); FUNCTIONS IN: ATPase activity; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: trans-Golgi network transport vesicle membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V0/A0 complex, 116kDa subunit (InterPro:IPR002490); BEST Arabidopsis thaliana protein match is: vacuolar proton ATPase A2 (TAIR:AT2G21410.1); Has 2824 Blast hits to 2207 proteins in 678 species: Archae - 341; Bacteria - 1172; Metazoa - 652; Fungi - 200; Plants - 117; Viruses - 0; Other Eukaryotes - 342 (source: NCBI BLink). & (gnl|cdd|37400 : 1040.0) no description available & (gnl|cdd|85492 : 594.0) no description available & (reliability: 2552.0) & (original description: Putative vatM, Description = V-type proton ATPase subunit a, PFAM = PF01496)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf00488_251869-261104' '(q08435|pma1_nicpl : 1665.0) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|35426 : 1636.0) no description available & (at5g62670 : 1604.0) H(+)-ATPase 11 (HA11); FUNCTIONS IN: ATPase activity; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 4 (TAIR:AT3G47950.1); Has 36311 Blast hits to 32678 proteins in 3159 species: Archae - 691; Bacteria - 22958; Metazoa - 3912; Fungi - 2478; Plants - 1926; Viruses - 3; Other Eukaryotes - 4343 (source: NCBI BLink). & (gnl|cdd|30822 : 506.0) no description available & (reliability: 3208.0) & (original description: Putative AHA4, Description = ATPase 4, plasma membrane-type, PFAM = PF00702;PF00690;PF00122)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf00576_336689-344468' '(gnl|cdd|35426 : 1626.0) no description available & (q03194|pma4_nicpl : 1539.0) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g80660 : 1521.0) H(+)-ATPase 9 (HA9); CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 6 (TAIR:AT2G07560.1). & (gnl|cdd|30822 : 504.0) no description available & (reliability: 3040.0) & (original description: Putative AHA4, Description = ATPase 4, plasma membrane-type, PFAM = PF00690;PF00122;PF00702)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf00747_89613-99687' '(at1g17500 : 1878.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, ATP biosynthetic process, phospholipid transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G72700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35427 : 1561.0) no description available & (gnl|cdd|30822 : 361.0) no description available & (reliability: 3740.0) & (original description: Putative ALA4, Description = Probable phospholipid-transporting ATPase 4, PFAM = PF13246;PF16209;PF16212)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf01051_253865-265061' '(at5g55290 : 94.0) ATPase, V0 complex, subunit E; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: ATP hydrolysis coupled proton transport; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V0 complex, subunit E (InterPro:IPR008389); BEST Arabidopsis thaliana protein match is: ATPase, V0 complex, subunit E (TAIR:AT4G26710.2); Has 270 Blast hits to 270 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 171; Fungi - 14; Plants - 67; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative VMA9, Description = ATPase, V0 complex, subunit E, PFAM = PF05493)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf01182_363514-383802' '(at1g12840 : 584.0) Encodes subunit C of the vacuolar H(+)-ATPase (V-ATPase). Bound and phosphorylated by AtWNK8.; DE-ETIOLATED 3 (DET3); FUNCTIONS IN: proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: lignin biosynthetic process, regulation of carbohydrate biosynthetic process, unidimensional cell growth; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1 complex, subunit C (InterPro:IPR004907); Has 563 Blast hits to 541 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 263; Fungi - 140; Plants - 72; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|38120 : 433.0) no description available & (q9scb9|vatc_horvu : 423.0) Vacuolar ATP synthase subunit C (EC 3.6.3.14) (V-ATPase C subunit) (Vacuolar proton pump C subunit) - Hordeum vulgare (Barley) & (gnl|cdd|86278 : 415.0) no description available & (reliability: 1168.0) & (original description: Putative ATC, Description = V-type proton ATPase subunit C, PFAM = PF03223)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf01276_225169-229264' '(o82703|vatg2_tobac : 124.0) Vacuolar ATP synthase subunit G 2 (EC 3.6.3.14) (V-ATPase G subunit 2) (Vacuolar proton pump G subunit 2) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|86264 : 85.2) no description available & (at3g01390 : 82.8) Subunit G of the vacuolar membrane ATPAse complex; vacuolar membrane ATPase 10 (VMA10); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: ATP hydrolysis coupled proton transport; LOCATED IN: plasma membrane, proton-transporting two-sector ATPase complex, vacuole, plant-type vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar (H+)-ATPase G subunit (InterPro:IPR005124); BEST Arabidopsis thaliana protein match is: vacuolar ATP synthase subunit G2 (TAIR:AT4G23710.1); Has 621 Blast hits to 619 proteins in 206 species: Archae - 2; Bacteria - 17; Metazoa - 288; Fungi - 124; Plants - 126; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|36983 : 80.7) no description available & (reliability: 165.6) & (original description: Putative VATG2, Description = V-type proton ATPase subunit G 2, PFAM = PF03179)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf01320_1-13389' '(at1g79450 : 470.0) ALA-interacting subunit 5 (ALIS5); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid lumen, plasma membrane, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284, transmembrane eukaryotic (InterPro:IPR005045); BEST Arabidopsis thaliana protein match is: LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein (TAIR:AT1G16360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38163 : 377.0) no description available & (gnl|cdd|67019 : 288.0) no description available & (reliability: 940.0) & (original description: Putative ALIS5, Description = ALA-interacting subunit 5, PFAM = PF03381)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf01789_221620-229404' '(gnl|cdd|35426 : 1641.0) no description available & (at3g42640 : 1560.0) H(+)-ATPase 8 (HA8); FUNCTIONS IN: ATPase activity; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 6 (TAIR:AT2G07560.1); Has 37108 Blast hits to 32939 proteins in 3205 species: Archae - 721; Bacteria - 23855; Metazoa - 3927; Fungi - 2384; Plants - 1873; Viruses - 3; Other Eukaryotes - 4345 (source: NCBI BLink). & (q03194|pma4_nicpl : 1553.0) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|30822 : 510.0) no description available & (reliability: 3120.0) & (original description: Putative AHA8, Description = ATPase 8, plasma membrane-type, PFAM = PF00122;PF00690;PF00702)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf01905_137556-145744' '(gnl|cdd|35426 : 1581.0) no description available & (at3g42640 : 1459.0) H(+)-ATPase 8 (HA8); FUNCTIONS IN: ATPase activity; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 6 (TAIR:AT2G07560.1); Has 37108 Blast hits to 32939 proteins in 3205 species: Archae - 721; Bacteria - 23855; Metazoa - 3927; Fungi - 2384; Plants - 1873; Viruses - 3; Other Eukaryotes - 4345 (source: NCBI BLink). & (q03194|pma4_nicpl : 1423.0) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|30822 : 513.0) no description available & (reliability: 2918.0) & (original description: Putative a1, Description = Plasma membrane ATPase, PFAM = PF00122;PF00702;PF00690)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf01917_316808-338754' '(at1g59820 : 1866.0) Encodes a phospholipid translocase. Involved in secretory vesicle formation from trans-Golgi in peripheral columella cells at the root tip. Mutants have short primary roots and grow slower.; aminophospholipid ATPase 3 (ALA3); FUNCTIONS IN: phospholipid transporter activity, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: Golgi vesicle budding, shoot development, root development; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G17500.1); Has 12776 Blast hits to 11290 proteins in 1545 species: Archae - 148; Bacteria - 4231; Metazoa - 2905; Fungi - 2108; Plants - 937; Viruses - 1; Other Eukaryotes - 2446 (source: NCBI BLink). & (gnl|cdd|35427 : 1413.0) no description available & (gnl|cdd|30822 : 405.0) no description available & (q6atv4|aca2_orysa : 81.3) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (reliability: 3732.0) & (original description: Putative ALA3, Description = Phospholipid-transporting ATPase 3, PFAM = PF00122;PF16212;PF16209;PF13246)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf02167_99751-106771' '(at5g04930 : 1692.0) Encodes a putative aminophospholipid translocase (p-type ATPase) involved in chilling response.; aminophospholipid ATPase 1 (ALA1); FUNCTIONS IN: protein binding, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, phospholipid transport, ATP biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), HAD superfamily hydrolase-like, type 3 (InterPro:IPR013200); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT3G13900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35427 : 1123.0) no description available & (gnl|cdd|30822 : 418.0) no description available & (q2qmx9|aca1_orysa : 84.3) Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) - Oryza sativa (Rice) & (reliability: 3384.0) & (original description: Putative ALA1, Description = Phospholipid-transporting ATPase 1, PFAM = PF16212;PF16209;PF00122;PF13246)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf02461_430580-442751' '(at3g12740 : 526.0) Physically interacts with ALA3, and is required for the phospholipid translocase activity of ALA3.; ALA-interacting subunit 1 (ALIS1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284, transmembrane eukaryotic (InterPro:IPR005045); BEST Arabidopsis thaliana protein match is: LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein (TAIR:AT1G54320.1); Has 864 Blast hits to 864 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 234; Plants - 160; Viruses - 0; Other Eukaryotes - 218 (source: NCBI BLink). & (gnl|cdd|38163 : 419.0) no description available & (gnl|cdd|67019 : 305.0) no description available & (reliability: 1052.0) & (original description: Putative ALIS1, Description = ALA-interacting subunit 1, PFAM = PF03381)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf02831_347163-354619' '(at1g17500 : 1812.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, ATP biosynthetic process, phospholipid transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G72700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35427 : 1523.0) no description available & (gnl|cdd|30822 : 281.0) no description available & (reliability: 3588.0) & (original description: Putative ALA4, Description = Probable phospholipid-transporting ATPase 4, PFAM = PF16209;PF13246;PF16212)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf02997_41093-48208' '(at3g13900 : 1835.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: ATP biosynthetic process, phospholipid transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G54280.1); Has 2989 Blast hits to 2738 proteins in 536 species: Archae - 31; Bacteria - 1088; Metazoa - 612; Fungi - 467; Plants - 304; Viruses - 0; Other Eukaryotes - 487 (source: NCBI BLink). & (gnl|cdd|35427 : 1550.0) no description available & (gnl|cdd|30822 : 291.0) no description available & (reliability: 3670.0) & (original description: Putative ALA7, Description = Probable phospholipid-transporting ATPase 7, PFAM = PF16212;PF16209;PF13246)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf03039_94824-97729' '(p09469|vata_dauca : 268.0) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14) (V-ATPase subunit A) (Vacuolar proton pump subunit alpha) (V-ATPase 69 kDa subunit) - Daucus carota (Carrot) & (at1g78900 : 254.0) Encodes catalytic subunit A of the vacuolar ATP synthase. Mutants are devoid of vacuolar ATPase activity as subunit A is encoded only by this gene and show strong defects in male gametophyte development and in Golgi stack morphology.; vacuolar ATP synthase subunit A (VHA-A); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism, ATP binding; INVOLVED IN: response to salt stress, proton transport, Golgi organization, pollen development; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194), ATPase, V1 complex, subunit A (InterPro:IPR005725); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36566 : 201.0) no description available & (gnl|cdd|31349 : 110.0) no description available & (reliability: 508.0) & (original description: Putative atpA, Description = V-type proton ATPase catalytic subunit A, PFAM = )' T '34.1' 'transport.p- and v-ATPases' 'niben101scf03969_574026-581027' '(at1g72700 : 1475.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, ATP biosynthetic process, phospholipid transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G17500.1); Has 13795 Blast hits to 12389 proteins in 1682 species: Archae - 129; Bacteria - 4365; Metazoa - 3646; Fungi - 2158; Plants - 963; Viruses - 3; Other Eukaryotes - 2531 (source: NCBI BLink). & (gnl|cdd|35427 : 850.0) no description available & (gnl|cdd|30822 : 283.0) no description available & (reliability: 2950.0) & (original description: Putative ALA5, Description = Probable phospholipid-transporting ATPase 5, PFAM = PF13246;PF00122;PF16209;PF16212)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf03979_230935-240519' '(q03194|pma4_nicpl : 1834.0) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|35426 : 1695.0) no description available & (at2g18960 : 1644.0) Encodes a plasma membrane proton ATPase. Mutants have a reduced ability to close their stomata in response to drought and are affected in stomatal but not seed responsiveness to ABA.; H(+)-ATPase 1 (HA1); FUNCTIONS IN: protein binding, ATPase activity, hydrogen-exporting ATPase activity, phosphorylative mechanism; INVOLVED IN: response to water deprivation, proton transport, response to abscisic acid stimulus, regulation of stomatal movement; LOCATED IN: nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 2 (TAIR:AT4G30190.1); Has 37421 Blast hits to 33000 proteins in 3185 species: Archae - 713; Bacteria - 23967; Metazoa - 3870; Fungi - 2594; Plants - 1874; Viruses - 3; Other Eukaryotes - 4400 (source: NCBI BLink). & (gnl|cdd|30822 : 515.0) no description available & (reliability: 3158.0) & (original description: Putative PMA4, Description = Plasma membrane ATPase 4, PFAM = PF00122;PF00690;PF00702)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf04195_86368-98545' '(p09469|vata_dauca : 1207.0) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14) (V-ATPase subunit A) (Vacuolar proton pump subunit alpha) (V-ATPase 69 kDa subunit) - Daucus carota (Carrot) & (at1g78900 : 1168.0) Encodes catalytic subunit A of the vacuolar ATP synthase. Mutants are devoid of vacuolar ATPase activity as subunit A is encoded only by this gene and show strong defects in male gametophyte development and in Golgi stack morphology.; vacuolar ATP synthase subunit A (VHA-A); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism, ATP binding; INVOLVED IN: response to salt stress, proton transport, Golgi organization, pollen development; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194), ATPase, V1 complex, subunit A (InterPro:IPR005725); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36566 : 1096.0) no description available & (gnl|cdd|31349 : 834.0) no description available & (reliability: 2336.0) & (original description: Putative atpA, Description = V-type proton ATPase catalytic subunit A, PFAM = PF00006;PF16886;PF02874)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf05422_10067-64943' '(at5g44240 : 1937.0) aminophospholipid ATPase 2 (ALA2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, phospholipid transport, ATP biosynthetic process; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: aminophospholipid ATPase 1 (TAIR:AT5G04930.1). & (gnl|cdd|35427 : 917.0) no description available & (gnl|cdd|30822 : 403.0) no description available & (q65x71|aca6_orysa : 95.9) Probable calcium-transporting ATPase 6, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 6) - Oryza sativa (Rice) & (reliability: 3874.0) & (original description: Putative ALA2, Description = Phospholipid-transporting ATPase 2, PFAM = PF16209;PF16212;PF00702;PF00122)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf06349_140107-152242' '(at3g27870 : 1722.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, ATP biosynthetic process, phospholipid transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G68710.1); Has 13753 Blast hits to 12595 proteins in 1702 species: Archae - 134; Bacteria - 4536; Metazoa - 3490; Fungi - 2070; Plants - 981; Viruses - 3; Other Eukaryotes - 2539 (source: NCBI BLink). & (gnl|cdd|35427 : 1496.0) no description available & (gnl|cdd|30822 : 420.0) no description available & (reliability: 3444.0) & (original description: Putative ALA8, Description = Probable phospholipid-transporting ATPase 8, PFAM = PF13246;PF16209;PF16212;PF00122)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf07395_128-9066' '(q08436|pma3_nicpl : 1682.0) Plasma membrane ATPase 3 (EC 3.6.3.6) (Proton pump 3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|35426 : 1628.0) no description available & (at5g62670 : 1576.0) H(+)-ATPase 11 (HA11); FUNCTIONS IN: ATPase activity; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 4 (TAIR:AT3G47950.1); Has 36311 Blast hits to 32678 proteins in 3159 species: Archae - 691; Bacteria - 22958; Metazoa - 3912; Fungi - 2478; Plants - 1926; Viruses - 3; Other Eukaryotes - 4343 (source: NCBI BLink). & (gnl|cdd|30822 : 505.0) no description available & (reliability: 3152.0) & (original description: Putative AHA4, Description = ATPase 4, plasma membrane-type, PFAM = PF00122;PF00690;PF00702)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf07969_144389-178065' '(at1g59820 : 1979.0) Encodes a phospholipid translocase. Involved in secretory vesicle formation from trans-Golgi in peripheral columella cells at the root tip. Mutants have short primary roots and grow slower.; aminophospholipid ATPase 3 (ALA3); FUNCTIONS IN: phospholipid transporter activity, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: Golgi vesicle budding, shoot development, root development; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G17500.1); Has 12776 Blast hits to 11290 proteins in 1545 species: Archae - 148; Bacteria - 4231; Metazoa - 2905; Fungi - 2108; Plants - 937; Viruses - 1; Other Eukaryotes - 2446 (source: NCBI BLink). & (gnl|cdd|35427 : 1423.0) no description available & (gnl|cdd|30822 : 402.0) no description available & (q6atv4|aca2_orysa : 91.3) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (reliability: 3958.0) & (original description: Putative ALA3, Description = Phospholipid-transporting ATPase 3, PFAM = PF13246;PF16212;PF16209)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf08127_1242124-1249022' '(at1g68710 : 1842.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, phospholipid transport, ATP biosynthetic process; LOCATED IN: mitochondrion, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G26130.2); Has 13629 Blast hits to 12474 proteins in 1825 species: Archae - 135; Bacteria - 4718; Metazoa - 3129; Fungi - 2128; Plants - 1014; Viruses - 3; Other Eukaryotes - 2502 (source: NCBI BLink). & (gnl|cdd|35427 : 1575.0) no description available & (gnl|cdd|30822 : 420.0) no description available & (q6atv4|aca2_orysa : 82.8) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (reliability: 3572.0) & (original description: Putative ALA9, Description = Putative phospholipid-transporting ATPase 9, PFAM = PF16212;PF13246;PF16209)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf09112_363376-377814' '(gnl|cdd|83278 : 718.0) no description available & (gnl|cdd|35424 : 309.0) no description available & (q6atv4|aca2_orysa : 166.0) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (at5g57350 : 162.0) member of Plasma membrane H+-ATPase family; H(+)-ATPase 3 (HA3); FUNCTIONS IN: ATPase activity, hydrogen-exporting ATPase activity, phosphorylative mechanism; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 2 (TAIR:AT4G30190.1). & (reliability: 316.0) & (original description: Putative mgtA, Description = Magnesium-importing ATPase, PFAM = PF00122;PF00702;PF00690)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf09253_8139-18461' '(at3g27870 : 1132.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, ATP biosynthetic process, phospholipid transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G68710.1); Has 13753 Blast hits to 12595 proteins in 1702 species: Archae - 134; Bacteria - 4536; Metazoa - 3490; Fungi - 2070; Plants - 981; Viruses - 3; Other Eukaryotes - 2539 (source: NCBI BLink). & (gnl|cdd|35427 : 1002.0) no description available & (gnl|cdd|30822 : 304.0) no description available & (reliability: 2264.0) & (original description: Putative ALA2, Description = Phospholipid-transporting ATPase, PFAM = PF16209;PF13246;PF16212;PF08282)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf09906_24176-39479' '(at5g04930 : 1299.0) Encodes a putative aminophospholipid translocase (p-type ATPase) involved in chilling response.; aminophospholipid ATPase 1 (ALA1); FUNCTIONS IN: protein binding, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, phospholipid transport, ATP biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), HAD superfamily hydrolase-like, type 3 (InterPro:IPR013200); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT3G13900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35427 : 1151.0) no description available & (gnl|cdd|30822 : 294.0) no description available & (q65x71|aca6_orysa : 82.8) Probable calcium-transporting ATPase 6, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 6) - Oryza sativa (Rice) & (reliability: 2598.0) & (original description: Putative ALA1, Description = Phospholipid-transporting ATPase, PFAM = PF16209;PF00122;PF16212;PF00702)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf10436_124880-133687' '(gnl|cdd|35426 : 1546.0) no description available & (at1g17260 : 1424.0) belongs to H+-APTase gene family, involved in proanthocyanidin biosynthesis, disturbs the vacuolar biogenesis and acidification process; autoinhibited H(+)-ATPase isoform 10 (AHA10); FUNCTIONS IN: ATPase activity, cation-transporting ATPase activity, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: vacuole organization, vacuolar acidification, proanthocyanidin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 8 (TAIR:AT3G42640.1); Has 37639 Blast hits to 33046 proteins in 3187 species: Archae - 705; Bacteria - 24196; Metazoa - 3861; Fungi - 2534; Plants - 1888; Viruses - 3; Other Eukaryotes - 4452 (source: NCBI BLink). & (q03194|pma4_nicpl : 1373.0) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|30822 : 508.0) no description available & (reliability: 2848.0) & (original description: Putative pma9, Description = Plasma membrane ATPase, PFAM = PF00690;PF00702;PF00122)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf14144_14760-22492' '(gnl|cdd|35426 : 1579.0) no description available & (at3g42640 : 1456.0) H(+)-ATPase 8 (HA8); FUNCTIONS IN: ATPase activity; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 6 (TAIR:AT2G07560.1); Has 37108 Blast hits to 32939 proteins in 3205 species: Archae - 721; Bacteria - 23855; Metazoa - 3927; Fungi - 2384; Plants - 1873; Viruses - 3; Other Eukaryotes - 4345 (source: NCBI BLink). & (q03194|pma4_nicpl : 1420.0) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|30822 : 512.0) no description available & (reliability: 2912.0) & (original description: Putative AHA8, Description = ATPase 8, plasma membrane-type, PFAM = PF00122;PF00702;PF00690)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf14634_216195-232084' '(at2g28520 : 1282.0) Vacuolar proton ATPase subunit VHA-a isoform 1. Localized in the trans-Golgi network.; vacuolar proton ATPase A1 (VHA-A1); FUNCTIONS IN: ATPase activity; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: trans-Golgi network transport vesicle membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V0/A0 complex, 116kDa subunit (InterPro:IPR002490); BEST Arabidopsis thaliana protein match is: vacuolar proton ATPase A2 (TAIR:AT2G21410.1); Has 2824 Blast hits to 2207 proteins in 678 species: Archae - 341; Bacteria - 1172; Metazoa - 652; Fungi - 200; Plants - 117; Viruses - 0; Other Eukaryotes - 342 (source: NCBI BLink). & (gnl|cdd|37400 : 1034.0) no description available & (gnl|cdd|85492 : 594.0) no description available & (reliability: 2564.0) & (original description: Putative vatM, Description = V-type proton ATPase subunit a, PFAM = PF01496)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf15022_33730-50391' '(at4g39080 : 1194.0) Vacuolar proton ATPase subunit VHA-a isoform 3. Localized in the tonoplast.; vacuolar proton ATPase A3 (VHA-A3); FUNCTIONS IN: ATPase activity, hydrogen-translocating pyrophosphatase activity; INVOLVED IN: cellular response to nutrient levels, ATP synthesis coupled proton transport; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V0/A0 complex, 116kDa subunit (InterPro:IPR002490); BEST Arabidopsis thaliana protein match is: vacuolar proton ATPase A2 (TAIR:AT2G21410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37400 : 1058.0) no description available & (gnl|cdd|85492 : 604.0) no description available & (reliability: 2388.0) & (original description: Putative vatM, Description = V-type proton ATPase subunit a, PFAM = PF01496)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf16089_84802-97192' '(at5g04930 : 1300.0) Encodes a putative aminophospholipid translocase (p-type ATPase) involved in chilling response.; aminophospholipid ATPase 1 (ALA1); FUNCTIONS IN: protein binding, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, phospholipid transport, ATP biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), HAD superfamily hydrolase-like, type 3 (InterPro:IPR013200); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT3G13900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35427 : 1144.0) no description available & (gnl|cdd|30822 : 293.0) no description available & (q65x71|aca6_orysa : 81.6) Probable calcium-transporting ATPase 6, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 6) - Oryza sativa (Rice) & (reliability: 2600.0) & (original description: Putative Sb01g036200, Description = Phospholipid-transporting ATPase, PFAM = PF16209;PF16212;PF00122;PF00702)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf17482_36554-44723' '(gnl|cdd|35426 : 1495.0) no description available & (q08435|pma1_nicpl : 1379.0) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g62670 : 1378.0) H(+)-ATPase 11 (HA11); FUNCTIONS IN: ATPase activity; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 4 (TAIR:AT3G47950.1); Has 36311 Blast hits to 32678 proteins in 3159 species: Archae - 691; Bacteria - 22958; Metazoa - 3912; Fungi - 2478; Plants - 1926; Viruses - 3; Other Eukaryotes - 4343 (source: NCBI BLink). & (gnl|cdd|30822 : 505.0) no description available & (reliability: 2756.0) & (original description: Putative AHA4, Description = ATPase 4, plasma membrane-type, PFAM = PF00122;PF00702;PF00690)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf17922_55145-69558' '(at5g46150 : 451.0) LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284, transmembrane eukaryotic (InterPro:IPR005045); BEST Arabidopsis thaliana protein match is: ALA-interacting subunit 1 (TAIR:AT3G12740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38163 : 373.0) no description available & (gnl|cdd|67019 : 263.0) no description available & (reliability: 818.0) & (original description: Putative ALIS2, Description = Putative ALA-interacting subunit 2, PFAM = PF03381)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf20652_108034-126540' '(at2g21410 : 630.0) Vacuolar proton ATPase subunit VHA-a isoform 2. Localized in the tonoplast. Required for efficient nutrient storage but not for sodium accumulation.; vacuolar proton ATPase A2 (VHA-A2); FUNCTIONS IN: ATPase activity, hydrogen-translocating pyrophosphatase activity; INVOLVED IN: cellular response to nutrient levels, ATP synthesis coupled proton transport; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V0/A0 complex, 116kDa subunit (InterPro:IPR002490); BEST Arabidopsis thaliana protein match is: vacuolar proton ATPase A3 (TAIR:AT4G39080.1); Has 2867 Blast hits to 2293 proteins in 720 species: Archae - 334; Bacteria - 1213; Metazoa - 663; Fungi - 202; Plants - 115; Viruses - 0; Other Eukaryotes - 340 (source: NCBI BLink). & (gnl|cdd|37400 : 591.0) no description available & (gnl|cdd|85492 : 367.0) no description available & (reliability: 1260.0) & (original description: Putative vatM, Description = V-type proton ATPase subunit a, PFAM = PF01496;PF01496)' T '34.1' 'transport.p- and v-ATPases' 'niben101scf21647_114175-125498' '(p09469|vata_dauca : 1207.0) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14) (V-ATPase subunit A) (Vacuolar proton pump subunit alpha) (V-ATPase 69 kDa subunit) - Daucus carota (Carrot) & (at1g78900 : 1172.0) Encodes catalytic subunit A of the vacuolar ATP synthase. Mutants are devoid of vacuolar ATPase activity as subunit A is encoded only by this gene and show strong defects in male gametophyte development and in Golgi stack morphology.; vacuolar ATP synthase subunit A (VHA-A); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism, ATP binding; INVOLVED IN: response to salt stress, proton transport, Golgi organization, pollen development; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194), ATPase, V1 complex, subunit A (InterPro:IPR005725); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36566 : 1095.0) no description available & (gnl|cdd|31349 : 834.0) no description available & (reliability: 2344.0) & (original description: Putative atpA, Description = V-type proton ATPase catalytic subunit A, PFAM = PF16886;PF00006;PF02874)' T '34.1.1' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase' 'nbv0.3scaffold44177_6307-12263' '(at3g28715 : 546.0) ATPase, V0/A0 complex, subunit C/D; FUNCTIONS IN: hydrogen ion transmembrane transporter activity, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: ATPase, V0/A0 complex, subunit C/D (InterPro:IPR002843), ATPase, V0 complex, subunit D (InterPro:IPR016727); BEST Arabidopsis thaliana protein match is: ATPase, V0/A0 complex, subunit C/D (TAIR:AT3G28710.1). & (q8ru33|va0d_orysa : 545.0) Probable vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d subunit) (Vacuolar proton pump subunit d) - Oryza sativa (Rice) & (gnl|cdd|38168 : 419.0) no description available & (gnl|cdd|85820 : 250.0) no description available & (reliability: 1092.0) & (original description: Putative vma6, Description = V-type proton ATPase subunit d, PFAM = PF01992)' T '34.1.1' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase' 'nbv0.3scaffold49754_7046-12677' '(at4g02620 : 207.0) vacuolar ATPase subunit F family protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1 complex, subunit F, eukaryotic (InterPro:IPR005772), ATPase, V1/A1 complex, subunit F (InterPro:IPR008218); Has 520 Blast hits to 520 proteins in 240 species: Archae - 39; Bacteria - 0; Metazoa - 211; Fungi - 130; Plants - 61; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (gnl|cdd|38642 : 175.0) no description available & (gnl|cdd|85818 : 82.9) no description available & (reliability: 414.0) & (original description: Putative vatF, Description = V-type proton ATPase subunit F, PFAM = PF01990)' T '34.1.1' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase' 'nbv0.3scaffold71344_1-5532' '(o23948|vate_goshi : 293.0) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit) - Gossypium hirsutum (Upland cotton) & (at4g11150 : 291.0) Encodes a vacuolar H+-ATPase subunit E isoform 1 which is required for Golgi organization and vacuole function in embryogenesis.; vacuolar ATP synthase subunit E1 (TUF); FUNCTIONS IN: proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 18 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1/A1 complex, subunit E (InterPro:IPR002842); BEST Arabidopsis thaliana protein match is: vacuolar H+-ATPase subunit E isoform 3 (TAIR:AT1G64200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36877 : 241.0) no description available & (gnl|cdd|85819 : 183.0) no description available & (reliability: 570.0) & (original description: Putative VATE, Description = V-type proton ATPase subunit E, PFAM = PF01991)' T '34.1.1' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase' 'nbv0.5scaffold1080_341457-356813' '(at3g28715 : 659.0) ATPase, V0/A0 complex, subunit C/D; FUNCTIONS IN: hydrogen ion transmembrane transporter activity, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: ATPase, V0/A0 complex, subunit C/D (InterPro:IPR002843), ATPase, V0 complex, subunit D (InterPro:IPR016727); BEST Arabidopsis thaliana protein match is: ATPase, V0/A0 complex, subunit C/D (TAIR:AT3G28710.1). & (q8ru33|va0d_orysa : 653.0) Probable vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d subunit) (Vacuolar proton pump subunit d) - Oryza sativa (Rice) & (gnl|cdd|38168 : 510.0) no description available & (gnl|cdd|85820 : 309.0) no description available & (reliability: 1318.0) & (original description: Putative vma6, Description = V-type proton ATPase subunit d, PFAM = PF01992)' T '34.1.1' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase' 'niben044scf00041077ctg004_2349-7475' '(o23948|vate_goshi : 283.0) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit) - Gossypium hirsutum (Upland cotton) & (at4g11150 : 276.0) Encodes a vacuolar H+-ATPase subunit E isoform 1 which is required for Golgi organization and vacuole function in embryogenesis.; vacuolar ATP synthase subunit E1 (TUF); FUNCTIONS IN: proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 18 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1/A1 complex, subunit E (InterPro:IPR002842); BEST Arabidopsis thaliana protein match is: vacuolar H+-ATPase subunit E isoform 3 (TAIR:AT1G64200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36877 : 238.0) no description available & (gnl|cdd|85819 : 188.0) no description available & (reliability: 544.0) & (original description: Putative VATE, Description = V-type proton ATPase subunit E, PFAM = PF01991)' T '34.1.1' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase' 'niben044scf00060047ctg001_137-7001' '(at3g28715 : 676.0) ATPase, V0/A0 complex, subunit C/D; FUNCTIONS IN: hydrogen ion transmembrane transporter activity, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: ATPase, V0/A0 complex, subunit C/D (InterPro:IPR002843), ATPase, V0 complex, subunit D (InterPro:IPR016727); BEST Arabidopsis thaliana protein match is: ATPase, V0/A0 complex, subunit C/D (TAIR:AT3G28710.1). & (q8ru33|va0d_orysa : 665.0) Probable vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d subunit) (Vacuolar proton pump subunit d) - Oryza sativa (Rice) & (gnl|cdd|38168 : 524.0) no description available & (gnl|cdd|85820 : 317.0) no description available & (reliability: 1352.0) & (original description: Putative vma6, Description = V-type proton ATPase subunit d, PFAM = PF01992)' T '34.1.1' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase' 'niben101scf00054_183127-199570' '(at3g28715 : 674.0) ATPase, V0/A0 complex, subunit C/D; FUNCTIONS IN: hydrogen ion transmembrane transporter activity, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: ATPase, V0/A0 complex, subunit C/D (InterPro:IPR002843), ATPase, V0 complex, subunit D (InterPro:IPR016727); BEST Arabidopsis thaliana protein match is: ATPase, V0/A0 complex, subunit C/D (TAIR:AT3G28710.1). & (q8ru33|va0d_orysa : 668.0) Probable vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d subunit) (Vacuolar proton pump subunit d) - Oryza sativa (Rice) & (gnl|cdd|38168 : 524.0) no description available & (gnl|cdd|85820 : 319.0) no description available & (reliability: 1348.0) & (original description: Putative vma6, Description = V-type proton ATPase subunit d, PFAM = PF01992)' T '34.1.1' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase' 'niben101scf00152_916584-920485' '(q40585|vatl_tobac : 184.0) Vacuolar ATP synthase 16 kDa proteolipid subunit (EC 3.6.3.14) - Nicotiana tabacum (Common tobacco) & (at1g19910 : 182.0) vacuolar H+-pumping ATPase 16 kDa proteolipid (ava-p2); AVA-P2; FUNCTIONS IN: ATPase activity, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: vacuolar proton-transporting V-type ATPase, V0 domain, plasma membrane, vacuole; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: ATPase, F0/V0 complex, subunit C (InterPro:IPR002379), ATPase, V0 complex, proteolipid subunit C, eukaryotic (InterPro:IPR011555), ATPase, V0 complex, proteolipid subunit C (InterPro:IPR000245); BEST Arabidopsis thaliana protein match is: vacuolar-type H(+)-ATPase C3 (TAIR:AT4G38920.1); Has 2718 Blast hits to 2491 proteins in 678 species: Archae - 169; Bacteria - 703; Metazoa - 633; Fungi - 468; Plants - 340; Viruses - 0; Other Eukaryotes - 405 (source: NCBI BLink). & (gnl|cdd|35453 : 170.0) no description available & (reliability: 364.0) & (original description: Putative c'3, Description = V-type proton ATPase proteolipid subunit, PFAM = PF00137;PF00137)' T '34.1.1' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase' 'niben101scf00244_173898-176600' '(q41396|vate_spiol : 257.0) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit) - Spinacia oleracea (Spinach) & (at3g08560 : 255.0) vacuolar H+-ATPase subunit E isoform 2 (VHA-E2); FUNCTIONS IN: hydrogen-exporting ATPase activity, phosphorylative mechanism, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: vacuole, mitochondrial proton-transporting ATP synthase complex; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, vegetative cell; EXPRESSED DURING: pollen developmental stages, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, V1/A1 complex, subunit E (InterPro:IPR002842); BEST Arabidopsis thaliana protein match is: vacuolar ATP synthase subunit E1 (TAIR:AT4G11150.1); Has 759 Blast hits to 757 proteins in 292 species: Archae - 68; Bacteria - 19; Metazoa - 249; Fungi - 151; Plants - 127; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink). & (gnl|cdd|36877 : 233.0) no description available & (gnl|cdd|85819 : 176.0) no description available & (reliability: 506.0) & (original description: Putative VATE, Description = V-type proton ATPase subunit E, PFAM = PF01991)' T '34.1.1' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase' 'niben101scf00466_197368-203001' '(q40585|vatl_tobac : 184.0) Vacuolar ATP synthase 16 kDa proteolipid subunit (EC 3.6.3.14) - Nicotiana tabacum (Common tobacco) & (at1g19910 : 182.0) vacuolar H+-pumping ATPase 16 kDa proteolipid (ava-p2); AVA-P2; FUNCTIONS IN: ATPase activity, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: vacuolar proton-transporting V-type ATPase, V0 domain, plasma membrane, vacuole; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: ATPase, F0/V0 complex, subunit C (InterPro:IPR002379), ATPase, V0 complex, proteolipid subunit C, eukaryotic (InterPro:IPR011555), ATPase, V0 complex, proteolipid subunit C (InterPro:IPR000245); BEST Arabidopsis thaliana protein match is: vacuolar-type H(+)-ATPase C3 (TAIR:AT4G38920.1); Has 2718 Blast hits to 2491 proteins in 678 species: Archae - 169; Bacteria - 703; Metazoa - 633; Fungi - 468; Plants - 340; Viruses - 0; Other Eukaryotes - 405 (source: NCBI BLink). & (gnl|cdd|35453 : 171.0) no description available & (reliability: 364.0) & (original description: Putative c'3, Description = V-type proton ATPase proteolipid subunit, PFAM = PF00137;PF00137)' T '34.1.1' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase' 'niben101scf00892_92576-102028' '(at4g02620 : 208.0) vacuolar ATPase subunit F family protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1 complex, subunit F, eukaryotic (InterPro:IPR005772), ATPase, V1/A1 complex, subunit F (InterPro:IPR008218); Has 520 Blast hits to 520 proteins in 240 species: Archae - 39; Bacteria - 0; Metazoa - 211; Fungi - 130; Plants - 61; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (gnl|cdd|38642 : 176.0) no description available & (gnl|cdd|85818 : 85.6) no description available & (reliability: 416.0) & (original description: Putative vatF, Description = V-type proton ATPase subunit F, PFAM = PF01990)' T '34.1.1' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase' 'niben101scf01817_270401-282408' '(o23948|vate_goshi : 291.0) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit) - Gossypium hirsutum (Upland cotton) & (at4g11150 : 289.0) Encodes a vacuolar H+-ATPase subunit E isoform 1 which is required for Golgi organization and vacuole function in embryogenesis.; vacuolar ATP synthase subunit E1 (TUF); FUNCTIONS IN: proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 18 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1/A1 complex, subunit E (InterPro:IPR002842); BEST Arabidopsis thaliana protein match is: vacuolar H+-ATPase subunit E isoform 3 (TAIR:AT1G64200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36877 : 241.0) no description available & (gnl|cdd|85819 : 182.0) no description available & (reliability: 566.0) & (original description: Putative VATE, Description = V-type proton ATPase subunit E, PFAM = PF01991)' T '34.1.1' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase' 'niben101scf04673_101864-107590' '(o23948|vate_goshi : 269.0) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit) - Gossypium hirsutum (Upland cotton) & (at4g11150 : 266.0) Encodes a vacuolar H+-ATPase subunit E isoform 1 which is required for Golgi organization and vacuole function in embryogenesis.; vacuolar ATP synthase subunit E1 (TUF); FUNCTIONS IN: proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 18 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1/A1 complex, subunit E (InterPro:IPR002842); BEST Arabidopsis thaliana protein match is: vacuolar H+-ATPase subunit E isoform 3 (TAIR:AT1G64200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36877 : 244.0) no description available & (gnl|cdd|85819 : 189.0) no description available & (reliability: 528.0) & (original description: Putative VATE, Description = V-type proton ATPase subunit E, PFAM = PF01991)' T '34.1.1' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase' 'niben101scf05841_261955-269749' '(at3g28715 : 678.0) ATPase, V0/A0 complex, subunit C/D; FUNCTIONS IN: hydrogen ion transmembrane transporter activity, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: ATPase, V0/A0 complex, subunit C/D (InterPro:IPR002843), ATPase, V0 complex, subunit D (InterPro:IPR016727); BEST Arabidopsis thaliana protein match is: ATPase, V0/A0 complex, subunit C/D (TAIR:AT3G28710.1). & (q8ru33|va0d_orysa : 669.0) Probable vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d subunit) (Vacuolar proton pump subunit d) - Oryza sativa (Rice) & (gnl|cdd|38168 : 525.0) no description available & (gnl|cdd|85820 : 320.0) no description available & (reliability: 1356.0) & (original description: Putative vma6, Description = V-type proton ATPase subunit d 1, PFAM = PF01992)' T '34.1.1' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase' 'niben101scf07736_154239-160383' '(at4g02620 : 207.0) vacuolar ATPase subunit F family protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1 complex, subunit F, eukaryotic (InterPro:IPR005772), ATPase, V1/A1 complex, subunit F (InterPro:IPR008218); Has 520 Blast hits to 520 proteins in 240 species: Archae - 39; Bacteria - 0; Metazoa - 211; Fungi - 130; Plants - 61; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (gnl|cdd|38642 : 175.0) no description available & (gnl|cdd|85818 : 84.5) no description available & (reliability: 414.0) & (original description: Putative vatF, Description = V-type proton ATPase subunit F, PFAM = PF01990)' T '34.1.1' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase' 'niben101scf08565_17167-20351' '(p05499|atp6_tobac : 640.0) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6) - Nicotiana tabacum (Common tobacco) & (atmg00410 : 433.0) ATPase subunit 6; ATPase subunit 6-1 (ATP6-1); CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit A (InterPro:IPR000568); BEST Arabidopsis thaliana protein match is: ATPase, F0 complex, subunit A protein (TAIR:AT2G07741.1). & (gnl|cdd|39864 : 217.0) no description available & (gnl|cdd|84536 : 182.0) no description available & (reliability: 866.0) & (original description: Putative ATP6, Description = ATP synthase subunit a, PFAM = PF00119)' T '34.1.1' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase' 'niben101scf10228_249521-254712' '(q40585|vatl_tobac : 181.0) Vacuolar ATP synthase 16 kDa proteolipid subunit (EC 3.6.3.14) - Nicotiana tabacum (Common tobacco) & (at4g34720 : 180.0) vacuolar H+-pumping ATPase 16 kDa proteolipid (ava-p1); AVA-P1; FUNCTIONS IN: ATPase activity, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0/V0 complex, subunit C (InterPro:IPR002379), ATPase, V0 complex, proteolipid subunit C, eukaryotic (InterPro:IPR011555), ATPase, V0 complex, proteolipid subunit C (InterPro:IPR000245); BEST Arabidopsis thaliana protein match is: vacuolar-type H(+)-ATPase C3 (TAIR:AT4G38920.1); Has 2722 Blast hits to 2495 proteins in 678 species: Archae - 169; Bacteria - 703; Metazoa - 633; Fungi - 468; Plants - 344; Viruses - 0; Other Eukaryotes - 405 (source: NCBI BLink). & (gnl|cdd|35453 : 170.0) no description available & (reliability: 360.0) & (original description: Putative c'3, Description = V-type proton ATPase proteolipid subunit, PFAM = PF00137;PF00137)' T '34.1.1' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase' 'niben101scf12102_186170-195265' '(at4g02620 : 204.0) vacuolar ATPase subunit F family protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1 complex, subunit F, eukaryotic (InterPro:IPR005772), ATPase, V1/A1 complex, subunit F (InterPro:IPR008218); Has 520 Blast hits to 520 proteins in 240 species: Archae - 39; Bacteria - 0; Metazoa - 211; Fungi - 130; Plants - 61; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (gnl|cdd|38642 : 174.0) no description available & (gnl|cdd|85818 : 84.5) no description available & (reliability: 408.0) & (original description: Putative vatF, Description = V-type proton ATPase subunit F, PFAM = PF01990)' T '34.1.1' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase' 'niben101scf12932_105027-111945' '(o23948|vate_goshi : 311.0) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit) - Gossypium hirsutum (Upland cotton) & (at1g64200 : 305.0) vacuolar H+-ATPase subunit E isoform 3 (VHA-E3); FUNCTIONS IN: proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: plasma membrane, vacuole, mitochondrial proton-transporting ATP synthase complex; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1/A1 complex, subunit E (InterPro:IPR002842); BEST Arabidopsis thaliana protein match is: vacuolar ATP synthase subunit E1 (TAIR:AT4G11150.1); Has 792 Blast hits to 792 proteins in 304 species: Archae - 92; Bacteria - 13; Metazoa - 250; Fungi - 149; Plants - 127; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (gnl|cdd|36877 : 242.0) no description available & (gnl|cdd|85819 : 188.0) no description available & (reliability: 610.0) & (original description: Putative VATE, Description = V-type proton ATPase subunit E, PFAM = PF01991)' T '34.1.1' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase' 'niben101scf27183_46085-49266' '(q41396|vate_spiol : 262.0) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit) - Spinacia oleracea (Spinach) & (at4g11150 : 261.0) Encodes a vacuolar H+-ATPase subunit E isoform 1 which is required for Golgi organization and vacuole function in embryogenesis.; vacuolar ATP synthase subunit E1 (TUF); FUNCTIONS IN: proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 18 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1/A1 complex, subunit E (InterPro:IPR002842); BEST Arabidopsis thaliana protein match is: vacuolar H+-ATPase subunit E isoform 3 (TAIR:AT1G64200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36877 : 234.0) no description available & (gnl|cdd|85819 : 178.0) no description available & (reliability: 518.0) & (original description: Putative vhatp, Description = V-type proton ATPase subunit E, PFAM = PF01991)' T '34.1.1.1' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit B' 'niben044scf00006432ctg018_4245-12265' '(at4g38510 : 941.0) ATPase, V1 complex, subunit B protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, ATP binding, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: proton transport, ATP metabolic process, ATP synthesis coupled proton transport; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194), ATPase, V1 complex, subunit B (InterPro:IPR005723); BEST Arabidopsis thaliana protein match is: ATPase, V1 complex, subunit B protein (TAIR:AT1G76030.1). & (q40079|vatb2_horvu : 936.0) Vacuolar ATP synthase subunit B isoform 2 (EC 3.6.3.14) (V-ATPase B subunit 2) (Vacuolar proton pump B subunit 2) - Hordeum vulgare (Barley) & (gnl|cdd|36565 : 884.0) no description available & (gnl|cdd|31350 : 726.0) no description available & (reliability: 1882.0) & (original description: Putative vatB, Description = V-type proton ATPase subunit B, PFAM = PF02874;PF00006)' T '34.1.1.1' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit B' 'niben101scf01486_381029-389499' '(at4g38510 : 925.0) ATPase, V1 complex, subunit B protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, ATP binding, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: proton transport, ATP metabolic process, ATP synthesis coupled proton transport; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194), ATPase, V1 complex, subunit B (InterPro:IPR005723); BEST Arabidopsis thaliana protein match is: ATPase, V1 complex, subunit B protein (TAIR:AT1G76030.1). & (q40078|vatb1_horvu : 924.0) Vacuolar ATP synthase subunit B isoform 1 (EC 3.6.3.14) (V-ATPase B subunit 1) (Vacuolar proton pump B subunit 1) - Hordeum vulgare (Barley) & (gnl|cdd|36565 : 882.0) no description available & (gnl|cdd|31350 : 725.0) no description available & (reliability: 1850.0) & (original description: Putative vatB, Description = V-type proton ATPase subunit B, PFAM = PF00006;PF02874)' T '34.1.1.1' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit B' 'niben101scf01718_505807-512195' '(at4g38510 : 941.0) ATPase, V1 complex, subunit B protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, ATP binding, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: proton transport, ATP metabolic process, ATP synthesis coupled proton transport; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194), ATPase, V1 complex, subunit B (InterPro:IPR005723); BEST Arabidopsis thaliana protein match is: ATPase, V1 complex, subunit B protein (TAIR:AT1G76030.1). & (q40079|vatb2_horvu : 934.0) Vacuolar ATP synthase subunit B isoform 2 (EC 3.6.3.14) (V-ATPase B subunit 2) (Vacuolar proton pump B subunit 2) - Hordeum vulgare (Barley) & (gnl|cdd|36565 : 879.0) no description available & (gnl|cdd|31350 : 724.0) no description available & (reliability: 1882.0) & (original description: Putative vatB, Description = V-type proton ATPase subunit B, PFAM = PF02874;PF00006)' T '34.1.1.2' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit C' 'niben101scf00152_916584-920485' '(q40585|vatl_tobac : 184.0) Vacuolar ATP synthase 16 kDa proteolipid subunit (EC 3.6.3.14) - Nicotiana tabacum (Common tobacco) & (at1g19910 : 182.0) vacuolar H+-pumping ATPase 16 kDa proteolipid (ava-p2); AVA-P2; FUNCTIONS IN: ATPase activity, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: vacuolar proton-transporting V-type ATPase, V0 domain, plasma membrane, vacuole; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: ATPase, F0/V0 complex, subunit C (InterPro:IPR002379), ATPase, V0 complex, proteolipid subunit C, eukaryotic (InterPro:IPR011555), ATPase, V0 complex, proteolipid subunit C (InterPro:IPR000245); BEST Arabidopsis thaliana protein match is: vacuolar-type H(+)-ATPase C3 (TAIR:AT4G38920.1); Has 2718 Blast hits to 2491 proteins in 678 species: Archae - 169; Bacteria - 703; Metazoa - 633; Fungi - 468; Plants - 340; Viruses - 0; Other Eukaryotes - 405 (source: NCBI BLink). & (gnl|cdd|35453 : 170.0) no description available & (reliability: 358.0) & (original description: Putative c'3, Description = V-type proton ATPase proteolipid subunit, PFAM = PF00137;PF00137)' T '34.1.1.2' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit C' 'niben101scf00188_116587-120663' '(at4g32530 : 206.0) ATPase, F0/V0 complex, subunit C protein; FUNCTIONS IN: ATPase activity; INVOLVED IN: ATP synthesis coupled proton transport; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0/V0 complex, subunit C (InterPro:IPR002379), ATPase, V0 complex, proteolipid subunit C (InterPro:IPR000245); BEST Arabidopsis thaliana protein match is: ATPase, F0/V0 complex, subunit C protein (TAIR:AT2G25610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35454 : 193.0) no description available & (reliability: 412.0) & (original description: Putative vma16, Description = V-type proton ATPase 21 kDa proteolipid subunit, PFAM = PF00137;PF00137)' T '34.1.1.2' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit C' 'niben101scf00466_197368-203001' '(q40585|vatl_tobac : 184.0) Vacuolar ATP synthase 16 kDa proteolipid subunit (EC 3.6.3.14) - Nicotiana tabacum (Common tobacco) & (at1g19910 : 182.0) vacuolar H+-pumping ATPase 16 kDa proteolipid (ava-p2); AVA-P2; FUNCTIONS IN: ATPase activity, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: vacuolar proton-transporting V-type ATPase, V0 domain, plasma membrane, vacuole; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: ATPase, F0/V0 complex, subunit C (InterPro:IPR002379), ATPase, V0 complex, proteolipid subunit C, eukaryotic (InterPro:IPR011555), ATPase, V0 complex, proteolipid subunit C (InterPro:IPR000245); BEST Arabidopsis thaliana protein match is: vacuolar-type H(+)-ATPase C3 (TAIR:AT4G38920.1); Has 2718 Blast hits to 2491 proteins in 678 species: Archae - 169; Bacteria - 703; Metazoa - 633; Fungi - 468; Plants - 340; Viruses - 0; Other Eukaryotes - 405 (source: NCBI BLink). & (gnl|cdd|35453 : 171.0) no description available & (reliability: 362.0) & (original description: Putative c'3, Description = V-type proton ATPase proteolipid subunit, PFAM = PF00137;PF00137)' T '34.1.1.2' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit C' 'niben101scf01545_8762-16911' '(at4g32530 : 218.0) ATPase, F0/V0 complex, subunit C protein; FUNCTIONS IN: ATPase activity; INVOLVED IN: ATP synthesis coupled proton transport; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0/V0 complex, subunit C (InterPro:IPR002379), ATPase, V0 complex, proteolipid subunit C (InterPro:IPR000245); BEST Arabidopsis thaliana protein match is: ATPase, F0/V0 complex, subunit C protein (TAIR:AT2G25610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35454 : 190.0) no description available & (reliability: 436.0) & (original description: Putative vma16, Description = V-type proton ATPase 21 kDa proteolipid subunit, PFAM = PF00137;PF00137)' T '34.1.1.2' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit C' 'niben101scf03765_2176-5035' '(p17254|atp9_helan : 87.8) ATP synthase protein 9, mitochondrial (EC 3.6.3.14) (Lipid-binding protein) - Helianthus annuus (Common sunflower) & (atmg01080 : 82.8) subunit 9 of mitochondrial F0-ATPase; mitochondrial F0-ATPase subunit 9 (ATP9); FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit C, DCCD-binding site (InterPro:IPR020537), ATPase, F0/V0 complex, subunit C (InterPro:IPR002379), ATPase, F0 complex, subunit C (InterPro:IPR000454); BEST Arabidopsis thaliana protein match is: ATP synthase subunit C family protein (TAIR:AT2G07671.1). & (reliability: 165.6) & (original description: Putative ATP9, Description = ATP synthase subunit 9, mitochondrial, PFAM = PF00137)' T '34.1.1.2' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit C' 'niben101scf10228_249521-254712' '(q40585|vatl_tobac : 181.0) Vacuolar ATP synthase 16 kDa proteolipid subunit (EC 3.6.3.14) - Nicotiana tabacum (Common tobacco) & (at4g34720 : 180.0) vacuolar H+-pumping ATPase 16 kDa proteolipid (ava-p1); AVA-P1; FUNCTIONS IN: ATPase activity, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0/V0 complex, subunit C (InterPro:IPR002379), ATPase, V0 complex, proteolipid subunit C, eukaryotic (InterPro:IPR011555), ATPase, V0 complex, proteolipid subunit C (InterPro:IPR000245); BEST Arabidopsis thaliana protein match is: vacuolar-type H(+)-ATPase C3 (TAIR:AT4G38920.1); Has 2722 Blast hits to 2495 proteins in 678 species: Archae - 169; Bacteria - 703; Metazoa - 633; Fungi - 468; Plants - 344; Viruses - 0; Other Eukaryotes - 405 (source: NCBI BLink). & (gnl|cdd|35453 : 170.0) no description available & (reliability: 360.0) & (original description: Putative c'3, Description = V-type proton ATPase proteolipid subunit, PFAM = PF00137;PF00137)' T '34.1.1.3' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit D' 'nbv0.3scaffold16109_35090-37872' '(at3g58730 : 367.0) vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, membrane, plant-type vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1/A1 complex, subunit D (InterPro:IPR002699); Has 1576 Blast hits to 1575 proteins in 678 species: Archae - 260; Bacteria - 676; Metazoa - 232; Fungi - 148; Plants - 90; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|36860 : 297.0) no description available & (gnl|cdd|65595 : 175.0) no description available & (reliability: 734.0) & (original description: Putative vma8, Description = V-type proton ATPase subunit D, PFAM = PF01813)' T '34.1.1.3' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit D' 'niben101scf00215_1112926-1115708' '(at3g58730 : 381.0) vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, membrane, plant-type vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1/A1 complex, subunit D (InterPro:IPR002699); Has 1576 Blast hits to 1575 proteins in 678 species: Archae - 260; Bacteria - 676; Metazoa - 232; Fungi - 148; Plants - 90; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|36860 : 298.0) no description available & (gnl|cdd|65595 : 172.0) no description available & (reliability: 762.0) & (original description: Putative vma8, Description = V-type proton ATPase subunit D, PFAM = PF01813)' T '34.1.1.3' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit D' 'niben101scf04556_277135-280170' '(at3g58730 : 365.0) vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, membrane, plant-type vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1/A1 complex, subunit D (InterPro:IPR002699); Has 1576 Blast hits to 1575 proteins in 678 species: Archae - 260; Bacteria - 676; Metazoa - 232; Fungi - 148; Plants - 90; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|36860 : 298.0) no description available & (gnl|cdd|65595 : 175.0) no description available & (reliability: 730.0) & (original description: Putative vma8, Description = V-type proton ATPase subunit D, PFAM = PF01813)' T '34.1.1.4' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit E' 'nbv0.3scaffold71344_1-5532' '(o23948|vate_goshi : 293.0) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit) - Gossypium hirsutum (Upland cotton) & (at4g11150 : 291.0) Encodes a vacuolar H+-ATPase subunit E isoform 1 which is required for Golgi organization and vacuole function in embryogenesis.; vacuolar ATP synthase subunit E1 (TUF); FUNCTIONS IN: proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 18 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1/A1 complex, subunit E (InterPro:IPR002842); BEST Arabidopsis thaliana protein match is: vacuolar H+-ATPase subunit E isoform 3 (TAIR:AT1G64200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36877 : 241.0) no description available & (gnl|cdd|85819 : 183.0) no description available & (reliability: 582.0) & (original description: Putative VATE, Description = V-type proton ATPase subunit E, PFAM = PF01991)' T '34.1.1.4' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit E' 'niben044scf00041077ctg004_2349-7475' '(o23948|vate_goshi : 283.0) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit) - Gossypium hirsutum (Upland cotton) & (at4g11150 : 276.0) Encodes a vacuolar H+-ATPase subunit E isoform 1 which is required for Golgi organization and vacuole function in embryogenesis.; vacuolar ATP synthase subunit E1 (TUF); FUNCTIONS IN: proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 18 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1/A1 complex, subunit E (InterPro:IPR002842); BEST Arabidopsis thaliana protein match is: vacuolar H+-ATPase subunit E isoform 3 (TAIR:AT1G64200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36877 : 238.0) no description available & (gnl|cdd|85819 : 188.0) no description available & (reliability: 552.0) & (original description: Putative VATE, Description = V-type proton ATPase subunit E, PFAM = PF01991)' T '34.1.1.4' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit E' 'niben101scf00244_173898-176600' '(q41396|vate_spiol : 257.0) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit) - Spinacia oleracea (Spinach) & (at3g08560 : 255.0) vacuolar H+-ATPase subunit E isoform 2 (VHA-E2); FUNCTIONS IN: hydrogen-exporting ATPase activity, phosphorylative mechanism, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: vacuole, mitochondrial proton-transporting ATP synthase complex; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, vegetative cell; EXPRESSED DURING: pollen developmental stages, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, V1/A1 complex, subunit E (InterPro:IPR002842); BEST Arabidopsis thaliana protein match is: vacuolar ATP synthase subunit E1 (TAIR:AT4G11150.1); Has 759 Blast hits to 757 proteins in 292 species: Archae - 68; Bacteria - 19; Metazoa - 249; Fungi - 151; Plants - 127; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink). & (gnl|cdd|36877 : 233.0) no description available & (gnl|cdd|85819 : 176.0) no description available & (reliability: 510.0) & (original description: Putative VATE, Description = V-type proton ATPase subunit E, PFAM = PF01991)' T '34.1.1.4' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit E' 'niben101scf01817_270401-282408' '(o23948|vate_goshi : 291.0) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit) - Gossypium hirsutum (Upland cotton) & (at4g11150 : 289.0) Encodes a vacuolar H+-ATPase subunit E isoform 1 which is required for Golgi organization and vacuole function in embryogenesis.; vacuolar ATP synthase subunit E1 (TUF); FUNCTIONS IN: proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 18 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1/A1 complex, subunit E (InterPro:IPR002842); BEST Arabidopsis thaliana protein match is: vacuolar H+-ATPase subunit E isoform 3 (TAIR:AT1G64200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36877 : 241.0) no description available & (gnl|cdd|85819 : 182.0) no description available & (reliability: 578.0) & (original description: Putative VATE, Description = V-type proton ATPase subunit E, PFAM = PF01991)' T '34.1.1.4' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit E' 'niben101scf04673_101864-107590' '(o23948|vate_goshi : 269.0) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit) - Gossypium hirsutum (Upland cotton) & (at4g11150 : 266.0) Encodes a vacuolar H+-ATPase subunit E isoform 1 which is required for Golgi organization and vacuole function in embryogenesis.; vacuolar ATP synthase subunit E1 (TUF); FUNCTIONS IN: proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 18 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1/A1 complex, subunit E (InterPro:IPR002842); BEST Arabidopsis thaliana protein match is: vacuolar H+-ATPase subunit E isoform 3 (TAIR:AT1G64200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36877 : 244.0) no description available & (gnl|cdd|85819 : 189.0) no description available & (reliability: 532.0) & (original description: Putative VATE, Description = V-type proton ATPase subunit E, PFAM = PF01991)' T '34.1.1.4' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit E' 'niben101scf12932_105027-111945' '(o23948|vate_goshi : 311.0) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit) - Gossypium hirsutum (Upland cotton) & (at1g64200 : 305.0) vacuolar H+-ATPase subunit E isoform 3 (VHA-E3); FUNCTIONS IN: proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: plasma membrane, vacuole, mitochondrial proton-transporting ATP synthase complex; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1/A1 complex, subunit E (InterPro:IPR002842); BEST Arabidopsis thaliana protein match is: vacuolar ATP synthase subunit E1 (TAIR:AT4G11150.1); Has 792 Blast hits to 792 proteins in 304 species: Archae - 92; Bacteria - 13; Metazoa - 250; Fungi - 149; Plants - 127; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (gnl|cdd|36877 : 242.0) no description available & (gnl|cdd|85819 : 188.0) no description available & (reliability: 608.0) & (original description: Putative VATE, Description = V-type proton ATPase subunit E, PFAM = PF01991)' T '34.1.1.4' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit E' 'niben101scf27183_46085-49266' '(q41396|vate_spiol : 262.0) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit) - Spinacia oleracea (Spinach) & (at4g11150 : 261.0) Encodes a vacuolar H+-ATPase subunit E isoform 1 which is required for Golgi organization and vacuole function in embryogenesis.; vacuolar ATP synthase subunit E1 (TUF); FUNCTIONS IN: proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 18 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1/A1 complex, subunit E (InterPro:IPR002842); BEST Arabidopsis thaliana protein match is: vacuolar H+-ATPase subunit E isoform 3 (TAIR:AT1G64200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36877 : 234.0) no description available & (gnl|cdd|85819 : 178.0) no description available & (reliability: 522.0) & (original description: Putative vhatp, Description = V-type proton ATPase subunit E, PFAM = PF01991)' T '34.1.1.5' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit F' '' '' '34.1.1.6' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit H' 'nbv0.5scaffold1190_155718-163970' '(at3g42050 : 671.0) vacuolar ATP synthase subunit H family protein; FUNCTIONS IN: binding, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: vacuolar membrane, chloroplast, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1 complex, subunit H (InterPro:IPR004908), ATPase, V1 complex, subunit H, C-terminal (InterPro:IPR011987), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); Has 505 Blast hits to 479 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 202; Fungi - 135; Plants - 70; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (q84zc0|vath_orysa : 659.0) Probable vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H subunit) (Vacuolar proton pump subunit H) - Oryza sativa (Rice) & (gnl|cdd|29331 : 435.0) no description available & (gnl|cdd|37970 : 405.0) no description available & (reliability: 1342.0) & (original description: Putative vha-H, Description = Putative vacuolar ATPase subunit H, PFAM = PF03224;PF11698)' T '34.1.1.6' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit H' 'nbv0.5scaffold1190_160121-162771' '(q84zc0|vath_orysa : 147.0) Probable vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H subunit) (Vacuolar proton pump subunit H) - Oryza sativa (Rice) & (at3g42050 : 143.0) vacuolar ATP synthase subunit H family protein; FUNCTIONS IN: binding, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: vacuolar membrane, chloroplast, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1 complex, subunit H (InterPro:IPR004908), ATPase, V1 complex, subunit H, C-terminal (InterPro:IPR011987), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); Has 505 Blast hits to 479 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 202; Fungi - 135; Plants - 70; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (gnl|cdd|29331 : 113.0) no description available & (gnl|cdd|37970 : 108.0) no description available & (reliability: 286.0) & (original description: Putative atpvh1, Description = Putative V-type proton ATPase subunit H, PFAM = PF11698;PF03224)' T '34.1.1.6' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit H' 'nbv0.5scaffold4421_169752-179996' '(at3g42050 : 707.0) vacuolar ATP synthase subunit H family protein; FUNCTIONS IN: binding, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: vacuolar membrane, chloroplast, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1 complex, subunit H (InterPro:IPR004908), ATPase, V1 complex, subunit H, C-terminal (InterPro:IPR011987), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); Has 505 Blast hits to 479 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 202; Fungi - 135; Plants - 70; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (q84zc0|vath_orysa : 690.0) Probable vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H subunit) (Vacuolar proton pump subunit H) - Oryza sativa (Rice) & (gnl|cdd|29331 : 451.0) no description available & (gnl|cdd|37970 : 418.0) no description available & (reliability: 1414.0) & (original description: Putative atpvh1, Description = Putative V-type proton ATPase subunit H, PFAM = PF03224;PF11698)' T '34.1.1.6' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit H' 'niben044scf00045085ctg002_1491-3583' '(q84zc0|vath_orysa : 184.0) Probable vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H subunit) (Vacuolar proton pump subunit H) - Oryza sativa (Rice) & (at3g42050 : 177.0) vacuolar ATP synthase subunit H family protein; FUNCTIONS IN: binding, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: vacuolar membrane, chloroplast, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1 complex, subunit H (InterPro:IPR004908), ATPase, V1 complex, subunit H, C-terminal (InterPro:IPR011987), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); Has 505 Blast hits to 479 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 202; Fungi - 135; Plants - 70; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (gnl|cdd|29331 : 101.0) no description available & (gnl|cdd|37970 : 88.8) no description available & (reliability: 354.0) & (original description: Putative AT3G42050, Description = At3g42050-L, PFAM = PF03224)' T '34.1.1.6' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit H' 'niben044scf00045085ctg003_1-1834' '(q84zc0|vath_orysa : 218.0) Probable vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H subunit) (Vacuolar proton pump subunit H) - Oryza sativa (Rice) & (at3g42050 : 215.0) vacuolar ATP synthase subunit H family protein; FUNCTIONS IN: binding, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: vacuolar membrane, chloroplast, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1 complex, subunit H (InterPro:IPR004908), ATPase, V1 complex, subunit H, C-terminal (InterPro:IPR011987), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); Has 505 Blast hits to 479 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 202; Fungi - 135; Plants - 70; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (gnl|cdd|29331 : 138.0) no description available & (gnl|cdd|37970 : 131.0) no description available & (reliability: 430.0) & (original description: Putative vha-H, Description = Putative V-type proton ATPase subunit H, PFAM = PF03224)' T '34.1.1.6' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit H' 'niben101scf01382_675357-683793' '(at3g42050 : 711.0) vacuolar ATP synthase subunit H family protein; FUNCTIONS IN: binding, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: vacuolar membrane, chloroplast, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1 complex, subunit H (InterPro:IPR004908), ATPase, V1 complex, subunit H, C-terminal (InterPro:IPR011987), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); Has 505 Blast hits to 479 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 202; Fungi - 135; Plants - 70; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (q84zc0|vath_orysa : 694.0) Probable vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H subunit) (Vacuolar proton pump subunit H) - Oryza sativa (Rice) & (gnl|cdd|29331 : 457.0) no description available & (gnl|cdd|37970 : 422.0) no description available & (reliability: 1422.0) & (original description: Putative atpvh1, Description = Putative V-type proton ATPase subunit H, PFAM = PF11698;PF03224)' T '34.1.1.6' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit H' 'niben101scf03790_175432-178707' '(at3g42050 : 228.0) vacuolar ATP synthase subunit H family protein; FUNCTIONS IN: binding, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: vacuolar membrane, chloroplast, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1 complex, subunit H (InterPro:IPR004908), ATPase, V1 complex, subunit H, C-terminal (InterPro:IPR011987), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); Has 505 Blast hits to 479 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 202; Fungi - 135; Plants - 70; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (q84zc0|vath_orysa : 228.0) Probable vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H subunit) (Vacuolar proton pump subunit H) - Oryza sativa (Rice) & (gnl|cdd|29331 : 139.0) no description available & (gnl|cdd|37970 : 118.0) no description available & (reliability: 456.0) & (original description: Putative AT3G42050, Description = At3g42050-L, PFAM = PF03224)' T '34.1.2' 'transport.p- and v-ATPases.H+-exporting ATPase' 'nbv0.3scaffold44300_13381-17476' '(q03194|pma4_nicpl : 1228.0) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|35426 : 1100.0) no description available & (at2g18960 : 1086.0) Encodes a plasma membrane proton ATPase. Mutants have a reduced ability to close their stomata in response to drought and are affected in stomatal but not seed responsiveness to ABA.; H(+)-ATPase 1 (HA1); FUNCTIONS IN: protein binding, ATPase activity, hydrogen-exporting ATPase activity, phosphorylative mechanism; INVOLVED IN: response to water deprivation, proton transport, response to abscisic acid stimulus, regulation of stomatal movement; LOCATED IN: nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 2 (TAIR:AT4G30190.1); Has 37421 Blast hits to 33000 proteins in 3185 species: Archae - 713; Bacteria - 23967; Metazoa - 3870; Fungi - 2594; Plants - 1874; Viruses - 3; Other Eukaryotes - 4400 (source: NCBI BLink). & (gnl|cdd|30822 : 306.0) no description available & (reliability: 2172.0) & (original description: Putative a1, Description = Plasma membrane ATPase, PFAM = PF00702)' T '34.1.2' 'transport.p- and v-ATPases.H+-exporting ATPase' 'nbv0.5scaffold4018_13838-21740' '(gnl|cdd|35426 : 1638.0) no description available & (at3g42640 : 1556.0) H(+)-ATPase 8 (HA8); FUNCTIONS IN: ATPase activity; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 6 (TAIR:AT2G07560.1); Has 37108 Blast hits to 32939 proteins in 3205 species: Archae - 721; Bacteria - 23855; Metazoa - 3927; Fungi - 2384; Plants - 1873; Viruses - 3; Other Eukaryotes - 4345 (source: NCBI BLink). & (q03194|pma4_nicpl : 1544.0) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|30822 : 510.0) no description available & (reliability: 3090.0) & (original description: Putative AHA8, Description = ATPase 8, plasma membrane-type, PFAM = PF00690;PF00702;PF00122)' T '34.1.2' 'transport.p- and v-ATPases.H+-exporting ATPase' 'niben101scf00576_336689-344468' '(gnl|cdd|35426 : 1626.0) no description available & (q03194|pma4_nicpl : 1539.0) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g80660 : 1521.0) H(+)-ATPase 9 (HA9); CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 6 (TAIR:AT2G07560.1). & (gnl|cdd|30822 : 504.0) no description available & (reliability: 3042.0) & (original description: Putative AHA4, Description = ATPase 4, plasma membrane-type, PFAM = PF00690;PF00122;PF00702)' T '34.1.2' 'transport.p- and v-ATPases.H+-exporting ATPase' 'niben101scf01789_221620-229404' '(gnl|cdd|35426 : 1641.0) no description available & (at3g42640 : 1560.0) H(+)-ATPase 8 (HA8); FUNCTIONS IN: ATPase activity; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 6 (TAIR:AT2G07560.1); Has 37108 Blast hits to 32939 proteins in 3205 species: Archae - 721; Bacteria - 23855; Metazoa - 3927; Fungi - 2384; Plants - 1873; Viruses - 3; Other Eukaryotes - 4345 (source: NCBI BLink). & (q03194|pma4_nicpl : 1553.0) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|30822 : 510.0) no description available & (reliability: 3096.0) & (original description: Putative AHA8, Description = ATPase 8, plasma membrane-type, PFAM = PF00122;PF00690;PF00702)' T '34.1.2' 'transport.p- and v-ATPases.H+-exporting ATPase' 'niben101scf01905_137556-145744' '(gnl|cdd|35426 : 1581.0) no description available & (at3g42640 : 1459.0) H(+)-ATPase 8 (HA8); FUNCTIONS IN: ATPase activity; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 6 (TAIR:AT2G07560.1); Has 37108 Blast hits to 32939 proteins in 3205 species: Archae - 721; Bacteria - 23855; Metazoa - 3927; Fungi - 2384; Plants - 1873; Viruses - 3; Other Eukaryotes - 4345 (source: NCBI BLink). & (q03194|pma4_nicpl : 1423.0) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|30822 : 513.0) no description available & (reliability: 2902.0) & (original description: Putative a1, Description = Plasma membrane ATPase, PFAM = PF00122;PF00702;PF00690)' T '34.1.2' 'transport.p- and v-ATPases.H+-exporting ATPase' 'niben101scf03979_230935-240519' '(q03194|pma4_nicpl : 1834.0) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|35426 : 1695.0) no description available & (at2g18960 : 1644.0) Encodes a plasma membrane proton ATPase. Mutants have a reduced ability to close their stomata in response to drought and are affected in stomatal but not seed responsiveness to ABA.; H(+)-ATPase 1 (HA1); FUNCTIONS IN: protein binding, ATPase activity, hydrogen-exporting ATPase activity, phosphorylative mechanism; INVOLVED IN: response to water deprivation, proton transport, response to abscisic acid stimulus, regulation of stomatal movement; LOCATED IN: nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 2 (TAIR:AT4G30190.1); Has 37421 Blast hits to 33000 proteins in 3185 species: Archae - 713; Bacteria - 23967; Metazoa - 3870; Fungi - 2594; Plants - 1874; Viruses - 3; Other Eukaryotes - 4400 (source: NCBI BLink). & (gnl|cdd|30822 : 515.0) no description available & (reliability: 3288.0) & (original description: Putative PMA4, Description = Plasma membrane ATPase 4, PFAM = PF00122;PF00690;PF00702)' T '34.1.2' 'transport.p- and v-ATPases.H+-exporting ATPase' 'niben101scf09112_363376-377814' '(gnl|cdd|83278 : 718.0) no description available & (gnl|cdd|35424 : 309.0) no description available & (q6atv4|aca2_orysa : 166.0) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (at5g57350 : 162.0) member of Plasma membrane H+-ATPase family; H(+)-ATPase 3 (HA3); FUNCTIONS IN: ATPase activity, hydrogen-exporting ATPase activity, phosphorylative mechanism; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 2 (TAIR:AT4G30190.1). & (reliability: 324.0) & (original description: Putative mgtA, Description = Magnesium-importing ATPase, PFAM = PF00122;PF00702;PF00690)' T '34.1.2' 'transport.p- and v-ATPases.H+-exporting ATPase' 'niben101scf10436_124880-133687' '(gnl|cdd|35426 : 1546.0) no description available & (at1g17260 : 1424.0) belongs to H+-APTase gene family, involved in proanthocyanidin biosynthesis, disturbs the vacuolar biogenesis and acidification process; autoinhibited H(+)-ATPase isoform 10 (AHA10); FUNCTIONS IN: ATPase activity, cation-transporting ATPase activity, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: vacuole organization, vacuolar acidification, proanthocyanidin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 8 (TAIR:AT3G42640.1); Has 37639 Blast hits to 33046 proteins in 3187 species: Archae - 705; Bacteria - 24196; Metazoa - 3861; Fungi - 2534; Plants - 1888; Viruses - 3; Other Eukaryotes - 4452 (source: NCBI BLink). & (q03194|pma4_nicpl : 1373.0) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|30822 : 508.0) no description available & (reliability: 2688.0) & (original description: Putative pma9, Description = Plasma membrane ATPase, PFAM = PF00690;PF00702;PF00122)' T '34.1.2' 'transport.p- and v-ATPases.H+-exporting ATPase' 'niben101scf14144_14760-22492' '(gnl|cdd|35426 : 1579.0) no description available & (at3g42640 : 1456.0) H(+)-ATPase 8 (HA8); FUNCTIONS IN: ATPase activity; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 6 (TAIR:AT2G07560.1); Has 37108 Blast hits to 32939 proteins in 3205 species: Archae - 721; Bacteria - 23855; Metazoa - 3927; Fungi - 2384; Plants - 1873; Viruses - 3; Other Eukaryotes - 4345 (source: NCBI BLink). & (q03194|pma4_nicpl : 1420.0) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (gnl|cdd|30822 : 512.0) no description available & (reliability: 2890.0) & (original description: Putative AHA8, Description = ATPase 8, plasma membrane-type, PFAM = PF00122;PF00702;PF00690)' T '34.1.2' 'transport.p- and v-ATPases.H+-exporting ATPase' 'niben101scf17482_36554-44723' '(gnl|cdd|35426 : 1495.0) no description available & (q08435|pma1_nicpl : 1379.0) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g62670 : 1378.0) H(+)-ATPase 11 (HA11); FUNCTIONS IN: ATPase activity; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 4 (TAIR:AT3G47950.1); Has 36311 Blast hits to 32678 proteins in 3159 species: Archae - 691; Bacteria - 22958; Metazoa - 3912; Fungi - 2478; Plants - 1926; Viruses - 3; Other Eukaryotes - 4343 (source: NCBI BLink). & (gnl|cdd|30822 : 505.0) no description available & (reliability: 2638.0) & (original description: Putative AHA4, Description = ATPase 4, plasma membrane-type, PFAM = PF00122;PF00702;PF00690)' T '34.1.3' 'transport.p- and v-ATPases.inhibitor' '' '' '34.2' 'transport.sugars' 'nbv0.3scaffold21827_1-8339' '(at4g00370 : 398.0) Encodes an inorganic phosphate transporter (PHT4;4).; ANTR2; FUNCTIONS IN: organic anion transmembrane transporter activity, inorganic phosphate transmembrane transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 4;1 (TAIR:AT2G29650.1); Has 37886 Blast hits to 37799 proteins in 2473 species: Archae - 506; Bacteria - 30466; Metazoa - 2514; Fungi - 1637; Plants - 427; Viruses - 0; Other Eukaryotes - 2336 (source: NCBI BLink). & (gnl|cdd|37743 : 214.0) no description available & (reliability: 796.0) & (original description: Putative 1, Description = Phosphate transporter PHT4, PFAM = PF07690)' T '34.2' 'transport.sugars' 'nbv0.3scaffold39404_2754-5108' '(at1g61790 : 106.0) Oligosaccharyltransferase complex/magnesium transporter family protein; FUNCTIONS IN: oligosaccharide transmembrane transporter activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Magnesium transporter protein 1 (InterPro:IPR006844), Oligosaccharyltransferase complex/magnesium transporter (InterPro:IPR021149); BEST Arabidopsis thaliana protein match is: Oligosaccharyltransferase complex/magnesium transporter family protein (TAIR:AT1G11560.1); Has 387 Blast hits to 387 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 196; Fungi - 79; Plants - 91; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative OST3A, Description = Magnesium transporter protein 1, PFAM = PF04756)' T '34.2' 'transport.sugars' 'nbv0.3scaffold65241_6583-10148' '(q41144|stc_ricco : 585.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (at1g11260 : 578.0) Encodes a H+/hexose cotransporter.; sugar transporter 1 (STP1); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter protein 12 (TAIR:AT4G21480.1); Has 29569 Blast hits to 28978 proteins in 2050 species: Archae - 503; Bacteria - 13950; Metazoa - 4366; Fungi - 6940; Plants - 2466; Viruses - 2; Other Eukaryotes - 1342 (source: NCBI BLink). & (gnl|cdd|84502 : 318.0) no description available & (gnl|cdd|35475 : 298.0) no description available & (reliability: 1156.0) & (original description: Putative hext, Description = Sugar porter (SP) family MFS transporter, PFAM = PF00083)' T '34.2' 'transport.sugars' 'nbv0.3scaffold78078_1874-7130' '(at5g26340 : 533.0) Encodes a protein with high affinity, hexose-specific/H+ symporter activity. The activity of the transporter appears to be negatively regulated by phosphorylation. Importantly, microarray analysis, as well as the study of the expression of this gene in mutants involved in programmed cell death (PCD) demonstrated a tight correlation between this gene's expression and PCD.; MSS1; FUNCTIONS IN: carbohydrate transmembrane transporter activity, high-affinity hydrogen:glucose symporter activity, sugar:hydrogen symporter activity, hexose:hydrogen symporter activity; INVOLVED IN: response to salt stress, apoptosis, phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter protein 7 (TAIR:AT4G02050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q10710|sta_ricco : 361.0) Sugar carrier protein A - Ricinus communis (Castor bean) & (gnl|cdd|84502 : 231.0) no description available & (gnl|cdd|35475 : 228.0) no description available & (reliability: 1066.0) & (original description: Putative HT, Description = Hexose transporter, PFAM = PF00083;PF00083)' T '34.2' 'transport.sugars' 'nbv0.5scaffold15_1218909-1255736' '(at3g05160 : 363.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G05165.3); Has 25901 Blast hits to 25268 proteins in 1843 species: Archae - 452; Bacteria - 10445; Metazoa - 4961; Fungi - 6202; Plants - 2658; Viruses - 0; Other Eukaryotes - 1183 (source: NCBI BLink). & (gnl|cdd|35475 : 215.0) no description available & (gnl|cdd|84502 : 166.0) no description available & (q41144|stc_ricco : 89.7) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 726.0) & (original description: Putative SFP5, Description = Sugar-porter family protein 5, PFAM = PF00083;PF00083)' T '34.2' 'transport.sugars' 'nbv0.5scaffold379_605241-621470' '(at3g43790 : 528.0) zinc induced facilitator-like 2 (ZIFL2); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: zinc induced facilitator-like 1 (TAIR:AT5G13750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37826 : 348.0) no description available & (gnl|cdd|87335 : 94.0) no description available & (reliability: 1016.0) & (original description: Putative ZIFL1, Description = Protein ZINC INDUCED FACILITATOR-LIKE 1, PFAM = PF07690)' T '34.2' 'transport.sugars' 'nbv0.5scaffold429_681811-754725' '(q41144|stc_ricco : 583.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (at1g11260 : 570.0) Encodes a H+/hexose cotransporter.; sugar transporter 1 (STP1); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter protein 12 (TAIR:AT4G21480.1); Has 29569 Blast hits to 28978 proteins in 2050 species: Archae - 503; Bacteria - 13950; Metazoa - 4366; Fungi - 6940; Plants - 2466; Viruses - 2; Other Eukaryotes - 1342 (source: NCBI BLink). & (gnl|cdd|84502 : 320.0) no description available & (gnl|cdd|35475 : 290.0) no description available & (reliability: 1140.0) & (original description: Putative HT11, Description = Putative hexose transporter, PFAM = PF00083)' T '34.2' 'transport.sugars' 'nbv0.5scaffold904_372766-381708' '(at4g35300 : 983.0) tonoplast monosaccharide transporter2 (TMT2); CONTAINS InterPro DOMAIN/s: Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: tonoplast monosaccharide transporter3 (TAIR:AT3G51490.2). & (gnl|cdd|84502 : 154.0) no description available & (gnl|cdd|35475 : 153.0) no description available & (q41144|stc_ricco : 95.1) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1966.0) & (original description: Putative stp1, Description = Hexose transporter, PFAM = PF00083;PF00083)' T '34.2' 'transport.sugars' 'nbv0.5scaffold1194_345981-356503' '(at1g54730 : 515.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G48020.1); Has 23568 Blast hits to 23366 proteins in 1753 species: Archae - 455; Bacteria - 9572; Metazoa - 4390; Fungi - 6076; Plants - 2075; Viruses - 0; Other Eukaryotes - 1000 (source: NCBI BLink). & (gnl|cdd|35475 : 277.0) no description available & (gnl|cdd|84502 : 234.0) no description available & (q41144|stc_ricco : 119.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1030.0) & (original description: Putative At1g54730, Description = Sugar transporter ERD6-like 5, PFAM = PF00083)' T '34.2' 'transport.sugars' 'nbv0.5scaffold1526_61550-69926' '(at5g26340 : 700.0) Encodes a protein with high affinity, hexose-specific/H+ symporter activity. The activity of the transporter appears to be negatively regulated by phosphorylation. Importantly, microarray analysis, as well as the study of the expression of this gene in mutants involved in programmed cell death (PCD) demonstrated a tight correlation between this gene's expression and PCD.; MSS1; FUNCTIONS IN: carbohydrate transmembrane transporter activity, high-affinity hydrogen:glucose symporter activity, sugar:hydrogen symporter activity, hexose:hydrogen symporter activity; INVOLVED IN: response to salt stress, apoptosis, phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter protein 7 (TAIR:AT4G02050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q10710|sta_ricco : 476.0) Sugar carrier protein A - Ricinus communis (Castor bean) & (gnl|cdd|84502 : 298.0) no description available & (gnl|cdd|35475 : 291.0) no description available & (reliability: 1400.0) & (original description: Putative ht2, Description = Hexose transporter, PFAM = PF00083;PF00083)' T '34.2' 'transport.sugars' 'nbv0.5scaffold1793_19098-24745' '(at3g18830 : 560.0) This gene encodes a plasma membrane-localized polyol/cyclitol/monosaccharide-H+-symporter. The symporter is able to catalyze the energy-dependent membrane passage of a wide range of linear polyols (three to six carbon backbone), of cyclic polyols (myo-inositol), and of numerous monosaccharides, including pyranose ring-forming and furanose ring-forming hexoses and pentoses. This gene belongs to a monosaccharide transporter-like (MST-like) superfamily.; polyol/monosaccharide transporter 5 (PMT5); FUNCTIONS IN: in 11 functions; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: polyol/monosaccharide transporter 1 (TAIR:AT2G16120.1); Has 41700 Blast hits to 40955 proteins in 2462 species: Archae - 780; Bacteria - 23122; Metazoa - 5370; Fungi - 7812; Plants - 2713; Viruses - 2; Other Eukaryotes - 1901 (source: NCBI BLink). & (gnl|cdd|35475 : 278.0) no description available & (gnl|cdd|84502 : 250.0) no description available & (q41144|stc_ricco : 131.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1120.0) & (original description: Putative plt2, Description = Putative polyol transported protein 2, PFAM = PF00083;PF00083)' T '34.2' 'transport.sugars' 'nbv0.5scaffold1836_25124-31416' '(at4g35300 : 843.0) tonoplast monosaccharide transporter2 (TMT2); CONTAINS InterPro DOMAIN/s: Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: tonoplast monosaccharide transporter3 (TAIR:AT3G51490.2). & (gnl|cdd|84502 : 158.0) no description available & (gnl|cdd|35475 : 157.0) no description available & (q07423|hex6_ricco : 89.7) Hexose carrier protein HEX6 - Ricinus communis (Castor bean) & (reliability: 1686.0) & (original description: Putative MSSP3, Description = Monosaccharide-sensing protein 3, PFAM = PF00083;PF00083)' T '34.2' 'transport.sugars' 'nbv0.5scaffold1921_81998-93602' '(at5g64500 : 562.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G22730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36544 : 352.0) no description available & (gnl|cdd|87335 : 84.0) no description available & (reliability: 1072.0) & (original description: Putative At5g64500, Description = Probable sphingolipid transporter spinster homolog 2, PFAM = PF07690)' T '34.2' 'transport.sugars' 'nbv0.5scaffold2651_95204-101437' '(at4g02050 : 754.0) sugar transporter protein 7 (STP7); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G26340.1); Has 26348 Blast hits to 25870 proteins in 1897 species: Archae - 376; Bacteria - 11847; Metazoa - 3711; Fungi - 6732; Plants - 2516; Viruses - 0; Other Eukaryotes - 1166 (source: NCBI BLink). & (q10710|sta_ricco : 744.0) Sugar carrier protein A - Ricinus communis (Castor bean) & (gnl|cdd|84502 : 326.0) no description available & (gnl|cdd|35475 : 310.0) no description available & (reliability: 1508.0) & (original description: Putative STP7, Description = Sugar transport protein 7, PFAM = PF00083)' T '34.2' 'transport.sugars' 'nbv0.5scaffold2846_275637-298115' '(at1g61790 : 347.0) Oligosaccharyltransferase complex/magnesium transporter family protein; FUNCTIONS IN: oligosaccharide transmembrane transporter activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Magnesium transporter protein 1 (InterPro:IPR006844), Oligosaccharyltransferase complex/magnesium transporter (InterPro:IPR021149); BEST Arabidopsis thaliana protein match is: Oligosaccharyltransferase complex/magnesium transporter family protein (TAIR:AT1G11560.1); Has 387 Blast hits to 387 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 196; Fungi - 79; Plants - 91; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|37814 : 231.0) no description available & (gnl|cdd|68333 : 196.0) no description available & (reliability: 694.0) & (original description: Putative OST3B, Description = Probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3B, PFAM = PF04756)' T '34.2' 'transport.sugars' 'nbv0.5scaffold3972_111482-135106' '(at3g05150 : 173.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: nucleus, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G18840.1); Has 29751 Blast hits to 29100 proteins in 2018 species: Archae - 566; Bacteria - 13294; Metazoa - 5300; Fungi - 6650; Plants - 2634; Viruses - 0; Other Eukaryotes - 1307 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative At3g05150, Description = Putative ERD6-like transporter, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben044scf00001493ctg013_1-3059' '(q41144|stc_ricco : 229.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (at4g21480 : 226.0) Putative sugar transporter. Expressed in nematode-induced root syncytia.; sugar transporter protein 12 (STP12); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: response to nematode; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter 1 (TAIR:AT1G11260.1); Has 29334 Blast hits to 28788 proteins in 2015 species: Archae - 490; Bacteria - 14513; Metazoa - 3914; Fungi - 6644; Plants - 2469; Viruses - 2; Other Eukaryotes - 1302 (source: NCBI BLink). & (gnl|cdd|35475 : 126.0) no description available & (gnl|cdd|84502 : 126.0) no description available & (reliability: 452.0) & (original description: Putative HT20, Description = Putative hexose transporter, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben044scf00003717ctg013_8216-11692' '(q41144|stc_ricco : 560.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (at1g11260 : 549.0) Encodes a H+/hexose cotransporter.; sugar transporter 1 (STP1); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter protein 12 (TAIR:AT4G21480.1); Has 29569 Blast hits to 28978 proteins in 2050 species: Archae - 503; Bacteria - 13950; Metazoa - 4366; Fungi - 6940; Plants - 2466; Viruses - 2; Other Eukaryotes - 1342 (source: NCBI BLink). & (gnl|cdd|84502 : 316.0) no description available & (gnl|cdd|35475 : 287.0) no description available & (reliability: 1098.0) & (original description: Putative STC, Description = Sugar carrier protein C, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben044scf00007569ctg005_4703-10806' '(at5g41760 : 467.0) Nucleotide-sugar transporter family protein; FUNCTIONS IN: nucleotide-sugar transmembrane transporter activity, CMP-sialic acid transmembrane transporter activity; INVOLVED IN: carbohydrate transport, nucleotide-sugar transport; LOCATED IN: endomembrane system, integral to membrane, Golgi membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide-sugar transporter (InterPro:IPR007271), UDP/CMP-sugar transporter (InterPro:IPR021189), UDP-galactose transporter (InterPro:IPR004689); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT4G35335.1); Has 1068 Blast hits to 1053 proteins in 185 species: Archae - 0; Bacteria - 3; Metazoa - 567; Fungi - 123; Plants - 182; Viruses - 0; Other Eukaryotes - 193 (source: NCBI BLink). & (gnl|cdd|37445 : 266.0) no description available & (gnl|cdd|67745 : 164.0) no description available & (reliability: 934.0) & (original description: Putative At5g41760, Description = CMP-sialic acid transporter 1, PFAM = PF04142)' T '34.2' 'transport.sugars' 'niben044scf00007972ctg000_1029-6178' '(at1g79820 : 315.0) SUPPRESSOR OF G PROTEIN BETA1 (SGB1); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G67300.1). & (gnl|cdd|84502 : 154.0) no description available & (gnl|cdd|35475 : 151.0) no description available & (reliability: 630.0) & (original description: Putative pGlT, Description = Sugar porter (SP) family MFS transporter, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben044scf00008780ctg004_2873-8882' '(at3g18830 : 626.0) This gene encodes a plasma membrane-localized polyol/cyclitol/monosaccharide-H+-symporter. The symporter is able to catalyze the energy-dependent membrane passage of a wide range of linear polyols (three to six carbon backbone), of cyclic polyols (myo-inositol), and of numerous monosaccharides, including pyranose ring-forming and furanose ring-forming hexoses and pentoses. This gene belongs to a monosaccharide transporter-like (MST-like) superfamily.; polyol/monosaccharide transporter 5 (PMT5); FUNCTIONS IN: in 11 functions; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: polyol/monosaccharide transporter 1 (TAIR:AT2G16120.1); Has 41700 Blast hits to 40955 proteins in 2462 species: Archae - 780; Bacteria - 23122; Metazoa - 5370; Fungi - 7812; Plants - 2713; Viruses - 2; Other Eukaryotes - 1901 (source: NCBI BLink). & (gnl|cdd|35475 : 312.0) no description available & (gnl|cdd|84502 : 287.0) no description available & (q41144|stc_ricco : 167.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1252.0) & (original description: Putative plt2, Description = Putative polyol transported protein 2, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben044scf00012138ctg013_5544-8692' '(at1g61790 : 399.0) Oligosaccharyltransferase complex/magnesium transporter family protein; FUNCTIONS IN: oligosaccharide transmembrane transporter activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Magnesium transporter protein 1 (InterPro:IPR006844), Oligosaccharyltransferase complex/magnesium transporter (InterPro:IPR021149); BEST Arabidopsis thaliana protein match is: Oligosaccharyltransferase complex/magnesium transporter family protein (TAIR:AT1G11560.1); Has 387 Blast hits to 387 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 196; Fungi - 79; Plants - 91; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|37814 : 264.0) no description available & (gnl|cdd|68333 : 237.0) no description available & (reliability: 798.0) & (original description: Putative OST3B, Description = Probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3B, PFAM = PF04756)' T '34.2' 'transport.sugars' 'niben044scf00016215ctg000_163-10417' '(at5g64500 : 610.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G22730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36544 : 385.0) no description available & (gnl|cdd|87335 : 88.6) no description available & (reliability: 1194.0) & (original description: Putative At5g64500, Description = Probable sphingolipid transporter spinster homolog 2, PFAM = PF07690)' T '34.2' 'transport.sugars' 'niben044scf00016511ctg002_43293-50618' '(at1g30220 : 844.0) Inositol transporter presenting conserved extracellular loop domains homologs of plexins/semaphorin/integrin (PSI) domains from animal type I receptors.; inositol transporter 2 (INT2); CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: inositol transporter 4 (TAIR:AT4G16480.1); Has 52249 Blast hits to 41863 proteins in 2438 species: Archae - 698; Bacteria - 26108; Metazoa - 7164; Fungi - 11733; Plants - 4458; Viruses - 2; Other Eukaryotes - 2086 (source: NCBI BLink). & (gnl|cdd|84502 : 262.0) no description available & (gnl|cdd|35475 : 254.0) no description available & (q41144|stc_ricco : 158.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1688.0) & (original description: Putative INT2, Description = Probable inositol transporter 2, PFAM = PF00083;PF00083)' T '34.2' 'transport.sugars' 'niben044scf00020866ctg001_376-3950' '(q41144|stc_ricco : 564.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (at1g11260 : 558.0) Encodes a H+/hexose cotransporter.; sugar transporter 1 (STP1); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter protein 12 (TAIR:AT4G21480.1); Has 29569 Blast hits to 28978 proteins in 2050 species: Archae - 503; Bacteria - 13950; Metazoa - 4366; Fungi - 6940; Plants - 2466; Viruses - 2; Other Eukaryotes - 1342 (source: NCBI BLink). & (gnl|cdd|84502 : 321.0) no description available & (gnl|cdd|35475 : 298.0) no description available & (reliability: 1116.0) & (original description: Putative pmt1, Description = Putative monosaccharide transporter 1, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben044scf00022159ctg013_4878-11583' '(at4g35300 : 882.0) tonoplast monosaccharide transporter2 (TMT2); CONTAINS InterPro DOMAIN/s: Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: tonoplast monosaccharide transporter3 (TAIR:AT3G51490.2). & (gnl|cdd|84502 : 163.0) no description available & (gnl|cdd|35475 : 161.0) no description available & (q07423|hex6_ricco : 85.9) Hexose carrier protein HEX6 - Ricinus communis (Castor bean) & (reliability: 1764.0) & (original description: Putative stp1, Description = Hexose transporter, PFAM = PF00083;PF00083)' T '34.2' 'transport.sugars' 'niben044scf00033051ctg003_998-7453' '(at4g35300 : 832.0) tonoplast monosaccharide transporter2 (TMT2); CONTAINS InterPro DOMAIN/s: Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: tonoplast monosaccharide transporter3 (TAIR:AT3G51490.2). & (gnl|cdd|84502 : 158.0) no description available & (gnl|cdd|35475 : 157.0) no description available & (q07423|hex6_ricco : 87.0) Hexose carrier protein HEX6 - Ricinus communis (Castor bean) & (reliability: 1664.0) & (original description: Putative MSSP2, Description = Monosaccharide-sensing protein 2, PFAM = PF00083;PF00083)' T '34.2' 'transport.sugars' 'niben044scf00047684ctg001_1-7737' '(at1g05030 : 662.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrion, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: plastidic GLC translocator (TAIR:AT5G16150.3); Has 32095 Blast hits to 31550 proteins in 2260 species: Archae - 588; Bacteria - 15264; Metazoa - 5199; Fungi - 6752; Plants - 2455; Viruses - 0; Other Eukaryotes - 1837 (source: NCBI BLink). & (gnl|cdd|84502 : 272.0) no description available & (gnl|cdd|35475 : 265.0) no description available & (q41144|stc_ricco : 127.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1324.0) & (original description: Putative pGlT, Description = Plastidic glucose transporter 4, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben044scf00058697ctg001_1486-6326' '(at5g26340 : 552.0) Encodes a protein with high affinity, hexose-specific/H+ symporter activity. The activity of the transporter appears to be negatively regulated by phosphorylation. Importantly, microarray analysis, as well as the study of the expression of this gene in mutants involved in programmed cell death (PCD) demonstrated a tight correlation between this gene's expression and PCD.; MSS1; FUNCTIONS IN: carbohydrate transmembrane transporter activity, high-affinity hydrogen:glucose symporter activity, sugar:hydrogen symporter activity, hexose:hydrogen symporter activity; INVOLVED IN: response to salt stress, apoptosis, phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter protein 7 (TAIR:AT4G02050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q41144|stc_ricco : 370.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (gnl|cdd|84502 : 263.0) no description available & (gnl|cdd|35475 : 250.0) no description available & (reliability: 1104.0) & (original description: Putative ht1, Description = Sugar transport protein 13, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben044scf00062251ctg000_30581-33430' '(at5g26340 : 206.0) Encodes a protein with high affinity, hexose-specific/H+ symporter activity. The activity of the transporter appears to be negatively regulated by phosphorylation. Importantly, microarray analysis, as well as the study of the expression of this gene in mutants involved in programmed cell death (PCD) demonstrated a tight correlation between this gene's expression and PCD.; MSS1; FUNCTIONS IN: carbohydrate transmembrane transporter activity, high-affinity hydrogen:glucose symporter activity, sugar:hydrogen symporter activity, hexose:hydrogen symporter activity; INVOLVED IN: response to salt stress, apoptosis, phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter protein 7 (TAIR:AT4G02050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q41144|stc_ricco : 146.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (gnl|cdd|35475 : 84.4) no description available & (reliability: 412.0) & (original description: Putative HT24, Description = Putative hexose transporter, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf00159_41053-48680' '(at1g05030 : 663.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrion, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: plastidic GLC translocator (TAIR:AT5G16150.3); Has 32095 Blast hits to 31550 proteins in 2260 species: Archae - 588; Bacteria - 15264; Metazoa - 5199; Fungi - 6752; Plants - 2455; Viruses - 0; Other Eukaryotes - 1837 (source: NCBI BLink). & (gnl|cdd|84502 : 277.0) no description available & (gnl|cdd|35475 : 271.0) no description available & (q41144|stc_ricco : 127.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1326.0) & (original description: Putative pGlcT4, Description = Plastidic glucose transporter 4, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf00176_942163-945239' '(at1g61790 : 365.0) Oligosaccharyltransferase complex/magnesium transporter family protein; FUNCTIONS IN: oligosaccharide transmembrane transporter activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Magnesium transporter protein 1 (InterPro:IPR006844), Oligosaccharyltransferase complex/magnesium transporter (InterPro:IPR021149); BEST Arabidopsis thaliana protein match is: Oligosaccharyltransferase complex/magnesium transporter family protein (TAIR:AT1G11560.1); Has 387 Blast hits to 387 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 196; Fungi - 79; Plants - 91; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|37814 : 239.0) no description available & (gnl|cdd|68333 : 204.0) no description available & (reliability: 730.0) & (original description: Putative OST3B, Description = Probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3B, PFAM = PF04756)' T '34.2' 'transport.sugars' 'niben101scf00220_298226-311212' '(at1g79820 : 632.0) SUPPRESSOR OF G PROTEIN BETA1 (SGB1); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G67300.1). & (gnl|cdd|35475 : 270.0) no description available & (gnl|cdd|84502 : 258.0) no description available & (q10710|sta_ricco : 126.0) Sugar carrier protein A - Ricinus communis (Castor bean) & (reliability: 1264.0) & (original description: Putative pGlT, Description = Sugar porter (SP) family MFS transporter, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf00297_33674-43424' '(at5g64500 : 561.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G22730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36544 : 353.0) no description available & (gnl|cdd|87335 : 82.9) no description available & (reliability: 1070.0) & (original description: Putative At5g64500, Description = Probable sphingolipid transporter spinster homolog 2, PFAM = PF07690)' T '34.2' 'transport.sugars' 'niben101scf00381_458677-470304' '(at4g35300 : 856.0) tonoplast monosaccharide transporter2 (TMT2); CONTAINS InterPro DOMAIN/s: Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: tonoplast monosaccharide transporter3 (TAIR:AT3G51490.2). & (gnl|cdd|84502 : 165.0) no description available & (gnl|cdd|35475 : 161.0) no description available & (q41144|stc_ricco : 85.1) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1712.0) & (original description: Putative stp1, Description = Hexose transporter, PFAM = PF00083;PF00083)' T '34.2' 'transport.sugars' 'niben101scf00503_540343-551616' '(at5g41760 : 438.0) Nucleotide-sugar transporter family protein; FUNCTIONS IN: nucleotide-sugar transmembrane transporter activity, CMP-sialic acid transmembrane transporter activity; INVOLVED IN: carbohydrate transport, nucleotide-sugar transport; LOCATED IN: endomembrane system, integral to membrane, Golgi membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide-sugar transporter (InterPro:IPR007271), UDP/CMP-sugar transporter (InterPro:IPR021189), UDP-galactose transporter (InterPro:IPR004689); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT4G35335.1); Has 1068 Blast hits to 1053 proteins in 185 species: Archae - 0; Bacteria - 3; Metazoa - 567; Fungi - 123; Plants - 182; Viruses - 0; Other Eukaryotes - 193 (source: NCBI BLink). & (gnl|cdd|37445 : 268.0) no description available & (gnl|cdd|67745 : 167.0) no description available & (reliability: 876.0) & (original description: Putative At5g41760, Description = CMP-sialic acid transporter 1, PFAM = PF04142)' T '34.2' 'transport.sugars' 'niben101scf00592_207096-213671' '(at1g75220 : 620.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G19450.1); Has 32350 Blast hits to 31611 proteins in 2276 species: Archae - 620; Bacteria - 16081; Metazoa - 5271; Fungi - 6395; Plants - 2558; Viruses - 2; Other Eukaryotes - 1423 (source: NCBI BLink). & (gnl|cdd|35475 : 293.0) no description available & (gnl|cdd|84502 : 274.0) no description available & (q10710|sta_ricco : 125.0) Sugar carrier protein A - Ricinus communis (Castor bean) & (reliability: 1240.0) & (original description: Putative At1g75220, Description = Sugar transporter ERD6-like 6, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf00703_478534-481565' '(at1g61790 : 398.0) Oligosaccharyltransferase complex/magnesium transporter family protein; FUNCTIONS IN: oligosaccharide transmembrane transporter activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Magnesium transporter protein 1 (InterPro:IPR006844), Oligosaccharyltransferase complex/magnesium transporter (InterPro:IPR021149); BEST Arabidopsis thaliana protein match is: Oligosaccharyltransferase complex/magnesium transporter family protein (TAIR:AT1G11560.1); Has 387 Blast hits to 387 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 196; Fungi - 79; Plants - 91; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|37814 : 260.0) no description available & (gnl|cdd|68333 : 233.0) no description available & (reliability: 796.0) & (original description: Putative OST3B, Description = Probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3B, PFAM = PF04756)' T '34.2' 'transport.sugars' 'niben101scf00712_424917-433028' '(at4g35300 : 957.0) tonoplast monosaccharide transporter2 (TMT2); CONTAINS InterPro DOMAIN/s: Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: tonoplast monosaccharide transporter3 (TAIR:AT3G51490.2). & (gnl|cdd|35475 : 152.0) no description available & (gnl|cdd|84502 : 152.0) no description available & (q41144|stc_ricco : 93.6) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1914.0) & (original description: Putative stp1, Description = Hexose transporter, PFAM = PF00083;PF00083)' T '34.2' 'transport.sugars' 'niben101scf00783_534995-542360' '(at5g65000 : 404.0) Nucleotide-sugar transporter family protein; FUNCTIONS IN: nucleotide-sugar transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: carbohydrate transport, nucleotide-sugar transport; LOCATED IN: integral to membrane, Golgi membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide-sugar transporter (InterPro:IPR007271); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37445 : 212.0) no description available & (gnl|cdd|67745 : 116.0) no description available & (reliability: 808.0) & (original description: Putative At5g65000, Description = CMP-sialic acid transporter 5, PFAM = PF04142)' T '34.2' 'transport.sugars' 'niben101scf00885_947114-954441' '(at1g30220 : 835.0) Inositol transporter presenting conserved extracellular loop domains homologs of plexins/semaphorin/integrin (PSI) domains from animal type I receptors.; inositol transporter 2 (INT2); CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: inositol transporter 4 (TAIR:AT4G16480.1); Has 52249 Blast hits to 41863 proteins in 2438 species: Archae - 698; Bacteria - 26108; Metazoa - 7164; Fungi - 11733; Plants - 4458; Viruses - 2; Other Eukaryotes - 2086 (source: NCBI BLink). & (gnl|cdd|84502 : 262.0) no description available & (gnl|cdd|35475 : 254.0) no description available & (q41144|stc_ricco : 158.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1670.0) & (original description: Putative INT2, Description = Probable inositol transporter 2, PFAM = PF00083;PF00083)' T '34.2' 'transport.sugars' 'niben101scf00963_418308-429416' '(at1g54730 : 558.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G48020.1); Has 23568 Blast hits to 23366 proteins in 1753 species: Archae - 455; Bacteria - 9572; Metazoa - 4390; Fungi - 6076; Plants - 2075; Viruses - 0; Other Eukaryotes - 1000 (source: NCBI BLink). & (gnl|cdd|35475 : 297.0) no description available & (gnl|cdd|84502 : 251.0) no description available & (q41144|stc_ricco : 131.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1116.0) & (original description: Putative At1g54730, Description = Sugar transporter ERD6-like 5, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf01049_321558-328938' '(at3g18830 : 617.0) This gene encodes a plasma membrane-localized polyol/cyclitol/monosaccharide-H+-symporter. The symporter is able to catalyze the energy-dependent membrane passage of a wide range of linear polyols (three to six carbon backbone), of cyclic polyols (myo-inositol), and of numerous monosaccharides, including pyranose ring-forming and furanose ring-forming hexoses and pentoses. This gene belongs to a monosaccharide transporter-like (MST-like) superfamily.; polyol/monosaccharide transporter 5 (PMT5); FUNCTIONS IN: in 11 functions; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: polyol/monosaccharide transporter 1 (TAIR:AT2G16120.1); Has 41700 Blast hits to 40955 proteins in 2462 species: Archae - 780; Bacteria - 23122; Metazoa - 5370; Fungi - 7812; Plants - 2713; Viruses - 2; Other Eukaryotes - 1901 (source: NCBI BLink). & (gnl|cdd|35475 : 310.0) no description available & (gnl|cdd|84502 : 290.0) no description available & (q41144|stc_ricco : 157.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1234.0) & (original description: Putative plt2, Description = Putative polyol transported protein 2, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf01063_631785-648084' '(at5g17010 : 580.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: vacuolar glucose transporter 1 (TAIR:AT3G03090.1). & (gnl|cdd|35475 : 272.0) no description available & (gnl|cdd|84502 : 255.0) no description available & (q07423|hex6_ricco : 145.0) Hexose carrier protein HEX6 - Ricinus communis (Castor bean) & (reliability: 1160.0) & (original description: Putative At5g17010, Description = D-xylose-proton symporter-like 2, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf01147_365970-382956' '(at1g79820 : 613.0) SUPPRESSOR OF G PROTEIN BETA1 (SGB1); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G67300.1). & (gnl|cdd|35475 : 271.0) no description available & (gnl|cdd|84502 : 257.0) no description available & (q10710|sta_ricco : 128.0) Sugar carrier protein A - Ricinus communis (Castor bean) & (reliability: 1226.0) & (original description: Putative pGlT, Description = Sugar porter (SP) family MFS transporter, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf01176_95164-105260' '(at4g35300 : 843.0) tonoplast monosaccharide transporter2 (TMT2); CONTAINS InterPro DOMAIN/s: Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: tonoplast monosaccharide transporter3 (TAIR:AT3G51490.2). & (gnl|cdd|35475 : 157.0) no description available & (gnl|cdd|84502 : 154.0) no description available & (q41144|stc_ricco : 82.4) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1686.0) & (original description: Putative stp1, Description = Hexose transporter, PFAM = PF00083;PF00083)' T '34.2' 'transport.sugars' 'niben101scf01322_287644-291154' '(at1g77210 : 751.0) AtSTP14 belongs to the family of sugar transport proteins (AtSTPs)in volved in monosaccharide transport. Heterologous expression in yeast revealed that AtSTP14 is the transporter specifc for galactose and does not transport other monosaccharides such as glucose or fructose.; sugar transport protein 14 (STP14); FUNCTIONS IN: galactose transmembrane transporter activity, carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter protein 7 (TAIR:AT4G02050.1). & (q10710|sta_ricco : 541.0) Sugar carrier protein A - Ricinus communis (Castor bean) & (gnl|cdd|84502 : 317.0) no description available & (gnl|cdd|35475 : 304.0) no description available & (reliability: 1502.0) & (original description: Putative STP14, Description = Sugar transport protein 14, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf01339_642639-651327' '(at2g43330 : 576.0) Encodes a tonoplast-localized myo-inositol exporter, involved in efflux of myo-inositol from the vacuole to the cytosol. The gene is ubiquitously expressed. Reduced root growth in knock-out mutants grown on low inositol agar medium.; inositol transporter 1 (INT1); FUNCTIONS IN: carbohydrate transmembrane transporter activity, myo-inositol:hydrogen symporter activity, sugar:hydrogen symporter activity; INVOLVED IN: myo-inositol transport; LOCATED IN: plant-type vacuole membrane, vacuole, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: inositol transporter 2 (TAIR:AT1G30220.1); Has 41776 Blast hits to 41190 proteins in 2518 species: Archae - 669; Bacteria - 22523; Metazoa - 5695; Fungi - 8297; Plants - 2788; Viruses - 0; Other Eukaryotes - 1804 (source: NCBI BLink). & (gnl|cdd|84502 : 319.0) no description available & (gnl|cdd|35475 : 310.0) no description available & (q41144|stc_ricco : 137.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1152.0) & (original description: Putative INT1, Description = Inositol transporter 1, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf01409_18804-29404' '(at5g57100 : 365.0) Nucleotide/sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide/sugar transporter family protein (TAIR:AT5G55950.1); Has 2192 Blast hits to 2189 proteins in 223 species: Archae - 0; Bacteria - 8; Metazoa - 527; Fungi - 398; Plants - 1015; Viruses - 0; Other Eukaryotes - 244 (source: NCBI BLink). & (gnl|cdd|36654 : 200.0) no description available & (reliability: 730.0) & (original description: Putative At5g55950, Description = Gb}, PFAM = PF03151)' T '34.2' 'transport.sugars' 'niben101scf01529_216774-222236' '(q41144|stc_ricco : 780.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (at1g11260 : 755.0) Encodes a H+/hexose cotransporter.; sugar transporter 1 (STP1); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter protein 12 (TAIR:AT4G21480.1); Has 29569 Blast hits to 28978 proteins in 2050 species: Archae - 503; Bacteria - 13950; Metazoa - 4366; Fungi - 6940; Plants - 2466; Viruses - 2; Other Eukaryotes - 1342 (source: NCBI BLink). & (gnl|cdd|84502 : 354.0) no description available & (gnl|cdd|35475 : 328.0) no description available & (reliability: 1510.0) & (original description: Putative STC, Description = Sugar carrier protein C, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf01716_70801-80178' '(at4g00370 : 764.0) Encodes an inorganic phosphate transporter (PHT4;4).; ANTR2; FUNCTIONS IN: organic anion transmembrane transporter activity, inorganic phosphate transmembrane transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 4;1 (TAIR:AT2G29650.1); Has 37886 Blast hits to 37799 proteins in 2473 species: Archae - 506; Bacteria - 30466; Metazoa - 2514; Fungi - 1637; Plants - 427; Viruses - 0; Other Eukaryotes - 2336 (source: NCBI BLink). & (gnl|cdd|37743 : 383.0) no description available & (gnl|cdd|87335 : 143.0) no description available & (reliability: 1528.0) & (original description: Putative PHT4, Description = Ascorbate transporter, chloroplastic, PFAM = PF07690)' T '34.2' 'transport.sugars' 'niben101scf01820_15391-20233' '(at4g16480 : 738.0) Encodes a high affinity H+:myo-inositol symporter. The only other compound shown to be transported was pinitol, a methylated derivative of myo-inositol.; inositol transporter 4 (INT4); FUNCTIONS IN: carbohydrate transmembrane transporter activity, myo-inositol:hydrogen symporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nositol transporter 3 (TAIR:AT2G35740.1); Has 51354 Blast hits to 41404 proteins in 2520 species: Archae - 707; Bacteria - 26083; Metazoa - 6832; Fungi - 11387; Plants - 4246; Viruses - 2; Other Eukaryotes - 2097 (source: NCBI BLink). & (gnl|cdd|84502 : 247.0) no description available & (gnl|cdd|35475 : 246.0) no description available & (q41144|stc_ricco : 155.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1476.0) & (original description: Putative INT4, Description = Inositol transporter 4, PFAM = PF00083;PF00083)' T '34.2' 'transport.sugars' 'niben101scf01917_932675-937486' '(at3g19940 : 630.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter 9 (TAIR:AT1G50310.1); Has 29704 Blast hits to 29217 proteins in 2046 species: Archae - 496; Bacteria - 14337; Metazoa - 4365; Fungi - 6719; Plants - 2392; Viruses - 0; Other Eukaryotes - 1395 (source: NCBI BLink). & (q41144|stc_ricco : 577.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (gnl|cdd|84502 : 334.0) no description available & (gnl|cdd|35475 : 310.0) no description available & (reliability: 1260.0) & (original description: Putative pmt1, Description = Putative monosaccharide transporter 1, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf01965_7799-44336' '(at5g13750 : 562.0) zinc induced facilitator-like 1 (ZIFL1); FUNCTIONS IN: tetracycline:hydrogen antiporter activity; INVOLVED IN: response to karrikin; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Tetracycline resistance protein, TetA (InterPro:IPR001958), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: zinc induced facilitator 1 (TAIR:AT5G13740.1); Has 18147 Blast hits to 17729 proteins in 2581 species: Archae - 337; Bacteria - 13496; Metazoa - 505; Fungi - 2137; Plants - 360; Viruses - 0; Other Eukaryotes - 1312 (source: NCBI BLink). & (gnl|cdd|37826 : 369.0) no description available & (reliability: 1036.0) & (original description: Putative ZIFL1, Description = Protein ZINC INDUCED FACILITATOR-LIKE 1, PFAM = PF07690)' T '34.2' 'transport.sugars' 'niben101scf01991_88553-100122' '(at5g16150 : 671.0) Encodes a putative plastidic glucose transporter.; plastidic GLC translocator (PGLCT); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: response to trehalose stimulus; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G05030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35475 : 288.0) no description available & (gnl|cdd|84502 : 283.0) no description available & (q41144|stc_ricco : 146.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1342.0) & (original description: Putative pGlT, Description = Plastidic glucose transporter 4, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf02147_51921-56071' '(at5g26250 : 603.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter 6 (TAIR:AT3G05960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q41144|stc_ricco : 474.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (gnl|cdd|84502 : 315.0) no description available & (gnl|cdd|35475 : 298.0) no description available & (reliability: 1206.0) & (original description: Putative STP8, Description = Sugar transport protein 8, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf02250_368225-373679' '(at1g07290 : 484.0) Encodes a GDP-mannose transporter.; golgi nucleotide sugar transporter 2 (GONST2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: golgi nucleotide sugar transporter 1 (TAIR:AT2G13650.3); Has 1672 Blast hits to 1666 proteins in 234 species: Archae - 0; Bacteria - 5; Metazoa - 480; Fungi - 272; Plants - 768; Viruses - 0; Other Eukaryotes - 147 (source: NCBI BLink). & (gnl|cdd|36657 : 264.0) no description available & (gnl|cdd|34674 : 161.0) no description available & (reliability: 968.0) & (original description: Putative GONST2, Description = GDP-mannose transporter GONST2, PFAM = PF03151)' T '34.2' 'transport.sugars' 'niben101scf02298_599205-605475' '(q41144|stc_ricco : 740.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (at1g11260 : 722.0) Encodes a H+/hexose cotransporter.; sugar transporter 1 (STP1); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter protein 12 (TAIR:AT4G21480.1); Has 29569 Blast hits to 28978 proteins in 2050 species: Archae - 503; Bacteria - 13950; Metazoa - 4366; Fungi - 6940; Plants - 2466; Viruses - 2; Other Eukaryotes - 1342 (source: NCBI BLink). & (gnl|cdd|84502 : 353.0) no description available & (gnl|cdd|35475 : 331.0) no description available & (reliability: 1444.0) & (original description: Putative STC, Description = Sugar carrier protein C, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf02381_593382-605060' '(at5g16150 : 681.0) Encodes a putative plastidic glucose transporter.; plastidic GLC translocator (PGLCT); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: response to trehalose stimulus; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G05030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35475 : 293.0) no description available & (gnl|cdd|84502 : 284.0) no description available & (q41144|stc_ricco : 148.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1362.0) & (original description: Putative pGlT, Description = Plastidic glucose transporter 4, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf02594_158359-167695' '(at1g75220 : 674.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G19450.1); Has 32350 Blast hits to 31611 proteins in 2276 species: Archae - 620; Bacteria - 16081; Metazoa - 5271; Fungi - 6395; Plants - 2558; Viruses - 2; Other Eukaryotes - 1423 (source: NCBI BLink). & (gnl|cdd|35475 : 294.0) no description available & (gnl|cdd|84502 : 269.0) no description available & (q41144|stc_ricco : 140.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1348.0) & (original description: Putative At1g75220, Description = Sugar transporter ERD6-like 6, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf02762_64510-77691' '(at5g64500 : 628.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G22730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36544 : 393.0) no description available & (gnl|cdd|87335 : 81.7) no description available & (reliability: 1146.0) & (original description: Putative At5g64500, Description = Probable sphingolipid transporter spinster homolog 2, PFAM = PF07690)' T '34.2' 'transport.sugars' 'niben101scf03036_268398-279473' '(at3g59360 : 633.0) UDP-galactose transporter 6 (UTR6); FUNCTIONS IN: nucleotide-sugar transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: carbohydrate transport, nucleotide-sugar transport; LOCATED IN: integral to membrane, Golgi membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide-sugar transporter (InterPro:IPR007271), UDP/CMP-sugar transporter (InterPro:IPR021189); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT2G43240.1); Has 997 Blast hits to 971 proteins in 170 species: Archae - 0; Bacteria - 8; Metazoa - 550; Fungi - 106; Plants - 185; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|37445 : 241.0) no description available & (gnl|cdd|67745 : 122.0) no description available & (reliability: 1266.0) & (original description: Putative UTR6, Description = CMP-sialic acid transporter 3, PFAM = PF04142)' T '34.2' 'transport.sugars' 'niben101scf03085_438427-441436' '(at1g61790 : 294.0) Oligosaccharyltransferase complex/magnesium transporter family protein; FUNCTIONS IN: oligosaccharide transmembrane transporter activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Magnesium transporter protein 1 (InterPro:IPR006844), Oligosaccharyltransferase complex/magnesium transporter (InterPro:IPR021149); BEST Arabidopsis thaliana protein match is: Oligosaccharyltransferase complex/magnesium transporter family protein (TAIR:AT1G11560.1); Has 387 Blast hits to 387 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 196; Fungi - 79; Plants - 91; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|37814 : 198.0) no description available & (gnl|cdd|68333 : 180.0) no description available & (reliability: 588.0) & (original description: Putative OST3B, Description = Probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3B, PFAM = PF04756)' T '34.2' 'transport.sugars' 'niben101scf03414_267047-277229' '(at2g29650 : 734.0) Encodes an inorganic phosphate transporter that is localized to the thylakoid membrane.; anion transporter 1 (ANTR1); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G00370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37743 : 369.0) no description available & (gnl|cdd|87335 : 135.0) no description available & (reliability: 1426.0) & (original description: Putative ANTR1, Description = Sodium-dependent phosphate transport protein 1, chloroplastic, PFAM = PF07690)' T '34.2' 'transport.sugars' 'niben101scf03644_70719-74676' '(q07423|hex6_ricco : 664.0) Hexose carrier protein HEX6 - Ricinus communis (Castor bean) & (at5g61520 : 520.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G34580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84502 : 304.0) no description available & (gnl|cdd|35475 : 279.0) no description available & (reliability: 1040.0) & (original description: Putative HEX6, Description = Hexose carrier protein HEX6, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf03644_75271-79868' '(q07423|hex6_ricco : 736.0) Hexose carrier protein HEX6 - Ricinus communis (Castor bean) & (at4g02050 : 545.0) sugar transporter protein 7 (STP7); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G26340.1); Has 26348 Blast hits to 25870 proteins in 1897 species: Archae - 376; Bacteria - 11847; Metazoa - 3711; Fungi - 6732; Plants - 2516; Viruses - 0; Other Eukaryotes - 1166 (source: NCBI BLink). & (gnl|cdd|84502 : 306.0) no description available & (gnl|cdd|35475 : 290.0) no description available & (reliability: 1090.0) & (original description: Putative HEX6, Description = Hexose carrier protein HEX6, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf03660_262108-269862' '(at1g75220 : 610.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G19450.1); Has 32350 Blast hits to 31611 proteins in 2276 species: Archae - 620; Bacteria - 16081; Metazoa - 5271; Fungi - 6395; Plants - 2558; Viruses - 2; Other Eukaryotes - 1423 (source: NCBI BLink). & (gnl|cdd|35475 : 281.0) no description available & (gnl|cdd|84502 : 256.0) no description available & (q41144|stc_ricco : 142.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1220.0) & (original description: Putative ERD6, Description = Sugar porter (SP) family MFS transporter, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf03711_2412-13227' '(at1g67300 : 583.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G79820.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35475 : 240.0) no description available & (gnl|cdd|84502 : 224.0) no description available & (q10710|sta_ricco : 99.0) Sugar carrier protein A - Ricinus communis (Castor bean) & (reliability: 1166.0) & (original description: Putative pGlT, Description = Plastidic glucose transporter 4, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf03748_86226-93869' '(at3g18830 : 469.0) This gene encodes a plasma membrane-localized polyol/cyclitol/monosaccharide-H+-symporter. The symporter is able to catalyze the energy-dependent membrane passage of a wide range of linear polyols (three to six carbon backbone), of cyclic polyols (myo-inositol), and of numerous monosaccharides, including pyranose ring-forming and furanose ring-forming hexoses and pentoses. This gene belongs to a monosaccharide transporter-like (MST-like) superfamily.; polyol/monosaccharide transporter 5 (PMT5); FUNCTIONS IN: in 11 functions; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: polyol/monosaccharide transporter 1 (TAIR:AT2G16120.1); Has 41700 Blast hits to 40955 proteins in 2462 species: Archae - 780; Bacteria - 23122; Metazoa - 5370; Fungi - 7812; Plants - 2713; Viruses - 2; Other Eukaryotes - 1901 (source: NCBI BLink). & (gnl|cdd|35475 : 302.0) no description available & (gnl|cdd|84502 : 294.0) no description available & (q07423|hex6_ricco : 171.0) Hexose carrier protein HEX6 - Ricinus communis (Castor bean) & (reliability: 938.0) & (original description: Putative PMT2, Description = Putative polyol/monosaccharide transporter, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf04113_1275580-1282366' '(at1g75220 : 682.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G19450.1); Has 32350 Blast hits to 31611 proteins in 2276 species: Archae - 620; Bacteria - 16081; Metazoa - 5271; Fungi - 6395; Plants - 2558; Viruses - 2; Other Eukaryotes - 1423 (source: NCBI BLink). & (gnl|cdd|35475 : 299.0) no description available & (gnl|cdd|84502 : 273.0) no description available & (q41144|stc_ricco : 133.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1364.0) & (original description: Putative At1g75220, Description = Sugar transporter ERD6-like 6, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf04240_361973-365824' '(at4g36670 : 631.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G18480.1); Has 44203 Blast hits to 43606 proteins in 2595 species: Archae - 767; Bacteria - 24504; Metazoa - 5461; Fungi - 8681; Plants - 2771; Viruses - 2; Other Eukaryotes - 2017 (source: NCBI BLink). & (gnl|cdd|35475 : 290.0) no description available & (gnl|cdd|84502 : 274.0) no description available & (q41144|stc_ricco : 184.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1262.0) & (original description: Putative PLT6, Description = Probable polyol transporter 6, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf04337_152560-160309' '(at1g77210 : 737.0) AtSTP14 belongs to the family of sugar transport proteins (AtSTPs)in volved in monosaccharide transport. Heterologous expression in yeast revealed that AtSTP14 is the transporter specifc for galactose and does not transport other monosaccharides such as glucose or fructose.; sugar transport protein 14 (STP14); FUNCTIONS IN: galactose transmembrane transporter activity, carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter protein 7 (TAIR:AT4G02050.1). & (q10710|sta_ricco : 533.0) Sugar carrier protein A - Ricinus communis (Castor bean) & (gnl|cdd|84502 : 306.0) no description available & (gnl|cdd|35475 : 295.0) no description available & (reliability: 1474.0) & (original description: Putative STP14, Description = Sugar transport protein 14, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf04384_598441-603352' '(at2g20780 : 632.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: polyol/monosaccharide transporter 5 (TAIR:AT3G18830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35475 : 317.0) no description available & (gnl|cdd|84502 : 308.0) no description available & (q41144|stc_ricco : 150.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1264.0) & (original description: Putative PLT4, Description = Probable polyol transporter 4, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf04674_430061-435581' '(at5g18840 : 611.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G48020.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35475 : 300.0) no description available & (gnl|cdd|84502 : 252.0) no description available & (q41144|stc_ricco : 130.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1222.0) & (original description: Putative At5g18840, Description = Sugar transporter ERD6-like 16, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf05301_501971-508520' '(at2g48020 : 672.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, chloroplast, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G18840.1); Has 32576 Blast hits to 32035 proteins in 2204 species: Archae - 531; Bacteria - 16009; Metazoa - 5272; Fungi - 6662; Plants - 2708; Viruses - 2; Other Eukaryotes - 1392 (source: NCBI BLink). & (gnl|cdd|35475 : 322.0) no description available & (gnl|cdd|84502 : 254.0) no description available & (q41144|stc_ricco : 153.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1344.0) & (original description: Putative At2g48020, Description = Sugar transporter ERD6-like 7, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf05601_162205-171306' '(at5g26340 : 719.0) Encodes a protein with high affinity, hexose-specific/H+ symporter activity. The activity of the transporter appears to be negatively regulated by phosphorylation. Importantly, microarray analysis, as well as the study of the expression of this gene in mutants involved in programmed cell death (PCD) demonstrated a tight correlation between this gene's expression and PCD.; MSS1; FUNCTIONS IN: carbohydrate transmembrane transporter activity, high-affinity hydrogen:glucose symporter activity, sugar:hydrogen symporter activity, hexose:hydrogen symporter activity; INVOLVED IN: response to salt stress, apoptosis, phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter protein 7 (TAIR:AT4G02050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q10710|sta_ricco : 482.0) Sugar carrier protein A - Ricinus communis (Castor bean) & (gnl|cdd|84502 : 331.0) no description available & (gnl|cdd|35475 : 313.0) no description available & (reliability: 1438.0) & (original description: Putative ht2, Description = Hexose transporter, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf05795_234343-244455' '(at5g59250 : 571.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G17010.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35475 : 290.0) no description available & (gnl|cdd|84502 : 260.0) no description available & (q10710|sta_ricco : 84.3) Sugar carrier protein A - Ricinus communis (Castor bean) & (reliability: 1142.0) & (original description: Putative At5g59250, Description = D-xylose-proton symporter-like 3, chloroplastic, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf05820_30187-36196' '(at5g26250 : 602.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter 6 (TAIR:AT3G05960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q41144|stc_ricco : 455.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (gnl|cdd|84502 : 302.0) no description available & (gnl|cdd|35475 : 282.0) no description available & (reliability: 1204.0) & (original description: Putative STP8, Description = Sugar transport protein 8, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf05883_232811-238769' '(at2g16120 : 469.0) polyol/monosaccharide transporter 1 (PMT1); CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: polyol/monosaccharide transporter 2 (TAIR:AT2G16130.1); Has 36841 Blast hits to 36098 proteins in 2329 species: Archae - 707; Bacteria - 19057; Metazoa - 5293; Fungi - 7417; Plants - 2614; Viruses - 2; Other Eukaryotes - 1751 (source: NCBI BLink). & (gnl|cdd|35475 : 231.0) no description available & (gnl|cdd|84502 : 226.0) no description available & (q41144|stc_ricco : 125.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 938.0) & (original description: Putative plt2, Description = Putative polyol transported protein 2, PFAM = PF00083;PF00083)' T '34.2' 'transport.sugars' 'niben101scf06395_4657-10872' '(at2g20780 : 727.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: polyol/monosaccharide transporter 5 (TAIR:AT3G18830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84502 : 308.0) no description available & (gnl|cdd|35475 : 305.0) no description available & (q41144|stc_ricco : 169.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1454.0) & (original description: Putative pmt4, Description = Polyol/monosaccharide transporter 4, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf06613_321147-329186' '(at2g48020 : 233.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, chloroplast, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G18840.1); Has 32576 Blast hits to 32035 proteins in 2204 species: Archae - 531; Bacteria - 16009; Metazoa - 5272; Fungi - 6662; Plants - 2708; Viruses - 2; Other Eukaryotes - 1392 (source: NCBI BLink). & (gnl|cdd|35475 : 139.0) no description available & (gnl|cdd|84502 : 121.0) no description available & (reliability: 466.0) & (original description: Putative At1g54730, Description = Sugar transporter ERD6-like 16, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf06613_324245-351148' '(at3g05150 : 452.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: nucleus, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G18840.1); Has 29751 Blast hits to 29100 proteins in 2018 species: Archae - 566; Bacteria - 13294; Metazoa - 5300; Fungi - 6650; Plants - 2634; Viruses - 0; Other Eukaryotes - 1307 (source: NCBI BLink). & (gnl|cdd|35475 : 269.0) no description available & (gnl|cdd|84502 : 245.0) no description available & (q41144|stc_ricco : 141.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 904.0) & (original description: Putative At3g05150, Description = Sugar transporter ERD6-like 8, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf06613_337723-369245' '(at3g05150 : 259.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: nucleus, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G18840.1); Has 29751 Blast hits to 29100 proteins in 2018 species: Archae - 566; Bacteria - 13294; Metazoa - 5300; Fungi - 6650; Plants - 2634; Viruses - 0; Other Eukaryotes - 1307 (source: NCBI BLink). & (gnl|cdd|35475 : 147.0) no description available & (gnl|cdd|84502 : 116.0) no description available & (q41144|stc_ricco : 80.1) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 518.0) & (original description: Putative ERD6, Description = Sugar porter (SP) family MFS transporter, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf06698_408169-419001' '(at1g76670 : 441.0) Nucleotide-sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT1G21070.1); Has 1975 Blast hits to 1967 proteins in 210 species: Archae - 0; Bacteria - 20; Metazoa - 359; Fungi - 295; Plants - 1101; Viruses - 0; Other Eukaryotes - 200 (source: NCBI BLink). & (gnl|cdd|36654 : 224.0) no description available & (gnl|cdd|66803 : 98.7) no description available & (reliability: 878.0) & (original description: Putative CGL7, Description = Nucleotide-sugar transporter family protein, PFAM = PF03151)' T '34.2' 'transport.sugars' 'niben101scf07907_66196-70521' '(at4g36670 : 634.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G18480.1); Has 44203 Blast hits to 43606 proteins in 2595 species: Archae - 767; Bacteria - 24504; Metazoa - 5461; Fungi - 8681; Plants - 2771; Viruses - 2; Other Eukaryotes - 2017 (source: NCBI BLink). & (gnl|cdd|35475 : 292.0) no description available & (gnl|cdd|84502 : 279.0) no description available & (q41144|stc_ricco : 181.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1268.0) & (original description: Putative PLT6, Description = Probable polyol transporter 6, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf07980_70085-117538' '(at3g05160 : 408.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G05165.3); Has 25901 Blast hits to 25268 proteins in 1843 species: Archae - 452; Bacteria - 10445; Metazoa - 4961; Fungi - 6202; Plants - 2658; Viruses - 0; Other Eukaryotes - 1183 (source: NCBI BLink). & (gnl|cdd|35475 : 249.0) no description available & (gnl|cdd|84502 : 197.0) no description available & (q07423|hex6_ricco : 108.0) Hexose carrier protein HEX6 - Ricinus communis (Castor bean) & (reliability: 816.0) & (original description: Putative At1g54730, Description = Sugar transporter ERD6-like 5, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf07980_122904-129865' '(at1g54730 : 408.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G48020.1); Has 23568 Blast hits to 23366 proteins in 1753 species: Archae - 455; Bacteria - 9572; Metazoa - 4390; Fungi - 6076; Plants - 2075; Viruses - 0; Other Eukaryotes - 1000 (source: NCBI BLink). & (gnl|cdd|35475 : 229.0) no description available & (gnl|cdd|84502 : 205.0) no description available & (q10710|sta_ricco : 108.0) Sugar carrier protein A - Ricinus communis (Castor bean) & (reliability: 816.0) & (original description: Putative SUGTL3, Description = Sugar transporter ERD6-like 2, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf08947_118557-136136' '(at3g59360 : 620.0) UDP-galactose transporter 6 (UTR6); FUNCTIONS IN: nucleotide-sugar transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: carbohydrate transport, nucleotide-sugar transport; LOCATED IN: integral to membrane, Golgi membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide-sugar transporter (InterPro:IPR007271), UDP/CMP-sugar transporter (InterPro:IPR021189); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT2G43240.1); Has 997 Blast hits to 971 proteins in 170 species: Archae - 0; Bacteria - 8; Metazoa - 550; Fungi - 106; Plants - 185; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (gnl|cdd|37445 : 239.0) no description available & (gnl|cdd|67745 : 123.0) no description available & (reliability: 1240.0) & (original description: Putative CSTLP3, Description = CMP-sialic acid transporter 3, PFAM = PF04142)' T '34.2' 'transport.sugars' 'niben101scf08947_157579-165223' '(at4g35335 : 491.0) Nucleotide-sugar transporter family protein; FUNCTIONS IN: nucleotide-sugar transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: carbohydrate transport, nucleotide-sugar transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide-sugar transporter (InterPro:IPR007271), UDP/CMP-sugar transporter (InterPro:IPR021189), UDP-galactose transporter (InterPro:IPR004689); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT5G41760.2); Has 1055 Blast hits to 1038 proteins in 182 species: Archae - 2; Bacteria - 16; Metazoa - 554; Fungi - 120; Plants - 194; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (gnl|cdd|37445 : 229.0) no description available & (gnl|cdd|67745 : 173.0) no description available & (reliability: 982.0) & (original description: Putative CSTLP2, Description = CMP-sialic acid transporter 2, PFAM = PF04142)' T '34.2' 'transport.sugars' 'niben101scf10381_376057-385131' '(at1g34580 : 627.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter 1 (TAIR:AT1G11260.1); Has 27155 Blast hits to 26691 proteins in 1939 species: Archae - 431; Bacteria - 12164; Metazoa - 3885; Fungi - 6882; Plants - 2524; Viruses - 0; Other Eukaryotes - 1269 (source: NCBI BLink). & (q41144|stc_ricco : 520.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (gnl|cdd|35475 : 287.0) no description available & (gnl|cdd|84502 : 284.0) no description available & (reliability: 1254.0) & (original description: Putative htn1, Description = Putative monosaccharide-H+ symporter, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf10753_179815-184326' '(q41144|stc_ricco : 665.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (at1g11260 : 659.0) Encodes a H+/hexose cotransporter.; sugar transporter 1 (STP1); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter protein 12 (TAIR:AT4G21480.1); Has 29569 Blast hits to 28978 proteins in 2050 species: Archae - 503; Bacteria - 13950; Metazoa - 4366; Fungi - 6940; Plants - 2466; Viruses - 2; Other Eukaryotes - 1342 (source: NCBI BLink). & (gnl|cdd|84502 : 347.0) no description available & (gnl|cdd|35475 : 332.0) no description available & (reliability: 1318.0) & (original description: Putative ht1, Description = Monosaccharide-H+ symporter, PFAM = PF00083)' T '34.2' 'transport.sugars' 'niben101scf18096_12303-17095' '(at4g16480 : 816.0) Encodes a high affinity H+:myo-inositol symporter. The only other compound shown to be transported was pinitol, a methylated derivative of myo-inositol.; inositol transporter 4 (INT4); FUNCTIONS IN: carbohydrate transmembrane transporter activity, myo-inositol:hydrogen symporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nositol transporter 3 (TAIR:AT2G35740.1); Has 51354 Blast hits to 41404 proteins in 2520 species: Archae - 707; Bacteria - 26083; Metazoa - 6832; Fungi - 11387; Plants - 4246; Viruses - 2; Other Eukaryotes - 2097 (source: NCBI BLink). & (gnl|cdd|35475 : 246.0) no description available & (gnl|cdd|84502 : 246.0) no description available & (q41144|stc_ricco : 136.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1632.0) & (original description: Putative INT4, Description = Inositol transporter 4, PFAM = PF00083;PF00083)' T '34.2.1' 'transport.sugars.sucrose' 'nbv0.3scaffold18779_14495-24616' '(at2g02860 : 792.0) encodes a sucrose transporter in sieve elements and a number of sink tissues and cell types. Gene expression is induced by wounding.; sucrose transporter 2 (SUT2); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sucrose-proton symporter 2 (TAIR:AT1G22710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35856 : 455.0) no description available & (q2qli1|sut2_orysa : 382.0) Sucrose transport protein 2 (Sucrose permease 2) (Sucrose-proton symporter 2) (Sucrose transporter 2) (SUC4-like protein) - Oryza sativa (Rice) & (reliability: 1584.0) & (original description: Putative suc3, Description = Sucrose transporter, PFAM = PF07690)' T '34.2.1' 'transport.sugars.sucrose' 'nbv0.3scaffold46723_1-7506' '(gnl|cdd|35856 : 458.0) no description available & (at1g71890 : 450.0) Encodes a sucrose transporter that is expressed in the endosperm. Mutants have delayed accumulation of fatty acids and embryo maturation.; SUC5; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, sucrose:hydrogen symporter activity; INVOLVED IN: seed development; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Sucrose/H+ symporter, plant (InterPro:IPR005989), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sucrose-proton symporter 1 (TAIR:AT1G71880.1); Has 2157 Blast hits to 2049 proteins in 534 species: Archae - 36; Bacteria - 796; Metazoa - 398; Fungi - 190; Plants - 419; Viruses - 0; Other Eukaryotes - 318 (source: NCBI BLink). & (q03411|sut_spiol : 429.0) Sucrose transport protein (Sucrose permease) (Sucrose-proton symporter) - Spinacia oleracea (Spinach) & (reliability: 900.0) & (original description: Putative sut, Description = Sucrose transport protein, PFAM = PF13347)' T '34.2.1' 'transport.sugars.sucrose' 'nbv0.5scaffold484_491847-505442' '(q03411|sut_spiol : 624.0) Sucrose transport protein (Sucrose permease) (Sucrose-proton symporter) - Spinacia oleracea (Spinach) & (at1g22710 : 612.0) Encodes for a high-affinity transporter essential for phloem loading and long-distance transport. A major sucrose transporter, AtSUC2 can also transport a wide range of physiological and synthetic glucose conjugates with both α- or β-linkage.; sucrose-proton symporter 2 (SUC2); CONTAINS InterPro DOMAIN/s: Sucrose/H+ symporter, plant (InterPro:IPR005989), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sucrose-proton symporter 1 (TAIR:AT1G71880.1); Has 2329 Blast hits to 2203 proteins in 568 species: Archae - 32; Bacteria - 908; Metazoa - 423; Fungi - 192; Plants - 420; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|35856 : 527.0) no description available & (gnl|cdd|84502 : 80.7) no description available & (reliability: 1224.0) & (original description: Putative sut, Description = Sucrose transport protein, PFAM = PF13347)' T '34.2.1' 'transport.sugars.sucrose' 'niben044scf00004155ctg003_975-18383' '(at1g09960 : 595.0) low affinity (10mM) sucrose transporter in sieve elements (phloem); sucrose transporter 4 (SUT4); FUNCTIONS IN: sucrose transmembrane transporter activity, carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, sucrose:hydrogen symporter activity; INVOLVED IN: sucrose transport, transmembrane transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose/H+ symporter, plant (InterPro:IPR005989), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sucrose-proton symporter 2 (TAIR:AT1G22710.1); Has 2568 Blast hits to 2441 proteins in 632 species: Archae - 30; Bacteria - 1104; Metazoa - 451; Fungi - 193; Plants - 403; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink). & (q2qli1|sut2_orysa : 529.0) Sucrose transport protein 2 (Sucrose permease 2) (Sucrose-proton symporter 2) (Sucrose transporter 2) (SUC4-like protein) - Oryza sativa (Rice) & (gnl|cdd|35856 : 499.0) no description available & (reliability: 1190.0) & (original description: Putative sut4, Description = Putative sucrose-H+ symporter, PFAM = PF07690)' T '34.2.1' 'transport.sugars.sucrose' 'niben101scf01267_54490-62542' '(at1g09960 : 649.0) low affinity (10mM) sucrose transporter in sieve elements (phloem); sucrose transporter 4 (SUT4); FUNCTIONS IN: sucrose transmembrane transporter activity, carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, sucrose:hydrogen symporter activity; INVOLVED IN: sucrose transport, transmembrane transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose/H+ symporter, plant (InterPro:IPR005989), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sucrose-proton symporter 2 (TAIR:AT1G22710.1); Has 2568 Blast hits to 2441 proteins in 632 species: Archae - 30; Bacteria - 1104; Metazoa - 451; Fungi - 193; Plants - 403; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink). & (q2qli1|sut2_orysa : 588.0) Sucrose transport protein 2 (Sucrose permease 2) (Sucrose-proton symporter 2) (Sucrose transporter 2) (SUC4-like protein) - Oryza sativa (Rice) & (gnl|cdd|35856 : 497.0) no description available & (reliability: 1298.0) & (original description: Putative sut4, Description = Putative sucrose-H+ symporter, PFAM = PF07690)' T '34.2.1' 'transport.sugars.sucrose' 'niben101scf01365_515114-523038' '(q03411|sut_spiol : 609.0) Sucrose transport protein (Sucrose permease) (Sucrose-proton symporter) - Spinacia oleracea (Spinach) & (at1g22710 : 607.0) Encodes for a high-affinity transporter essential for phloem loading and long-distance transport. A major sucrose transporter, AtSUC2 can also transport a wide range of physiological and synthetic glucose conjugates with both α- or β-linkage.; sucrose-proton symporter 2 (SUC2); CONTAINS InterPro DOMAIN/s: Sucrose/H+ symporter, plant (InterPro:IPR005989), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sucrose-proton symporter 1 (TAIR:AT1G71880.1); Has 2329 Blast hits to 2203 proteins in 568 species: Archae - 32; Bacteria - 908; Metazoa - 423; Fungi - 192; Plants - 420; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (gnl|cdd|35856 : 526.0) no description available & (reliability: 1214.0) & (original description: Putative sut, Description = Sucrose transport protein, PFAM = PF13347)' T '34.2.1' 'transport.sugars.sucrose' 'niben101scf03338_33246-46032' '(at1g09960 : 634.0) low affinity (10mM) sucrose transporter in sieve elements (phloem); sucrose transporter 4 (SUT4); FUNCTIONS IN: sucrose transmembrane transporter activity, carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, sucrose:hydrogen symporter activity; INVOLVED IN: sucrose transport, transmembrane transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose/H+ symporter, plant (InterPro:IPR005989), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sucrose-proton symporter 2 (TAIR:AT1G22710.1); Has 2568 Blast hits to 2441 proteins in 632 species: Archae - 30; Bacteria - 1104; Metazoa - 451; Fungi - 193; Plants - 403; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink). & (q2qli1|sut2_orysa : 563.0) Sucrose transport protein 2 (Sucrose permease 2) (Sucrose-proton symporter 2) (Sucrose transporter 2) (SUC4-like protein) - Oryza sativa (Rice) & (gnl|cdd|35856 : 499.0) no description available & (reliability: 1268.0) & (original description: Putative sut4, Description = Putative sucrose-H+ symporter, PFAM = PF13347)' T '34.2.1' 'transport.sugars.sucrose' 'niben101scf04285_460566-470708' '(at2g02860 : 798.0) encodes a sucrose transporter in sieve elements and a number of sink tissues and cell types. Gene expression is induced by wounding.; sucrose transporter 2 (SUT2); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sucrose-proton symporter 2 (TAIR:AT1G22710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35856 : 463.0) no description available & (q2qli1|sut2_orysa : 389.0) Sucrose transport protein 2 (Sucrose permease 2) (Sucrose-proton symporter 2) (Sucrose transporter 2) (SUC4-like protein) - Oryza sativa (Rice) & (reliability: 1596.0) & (original description: Putative suc3, Description = Sucrose transporter, PFAM = PF07690)' T '34.2.1' 'transport.sugars.sucrose' 'niben101scf06286_230181-238804' '(at2g02860 : 770.0) encodes a sucrose transporter in sieve elements and a number of sink tissues and cell types. Gene expression is induced by wounding.; sucrose transporter 2 (SUT2); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sucrose-proton symporter 2 (TAIR:AT1G22710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35856 : 451.0) no description available & (q2qli1|sut2_orysa : 207.0) Sucrose transport protein 2 (Sucrose permease 2) (Sucrose-proton symporter 2) (Sucrose transporter 2) (SUC4-like protein) - Oryza sativa (Rice) & (reliability: 1540.0) & (original description: Putative suc3, Description = Sucrose transporter, PFAM = PF07690)' T '34.3' 'transport.amino acids' 'nbv0.3scaffold8424_27506-33941' '(at2g02040 : 822.0) Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. Expression of the transcripts for this gene can be detected in the embryo through in situ hybridization. This protein does not have nitrate transporter activity based on oocyte transport assays.; peptide transporter 2 (PTR2); FUNCTIONS IN: dipeptide transporter activity, high affinity oligopeptide transporter activity, tripeptide transporter activity, peptide transporter activity, transporter activity; INVOLVED IN: dipeptide transport, tripeptide transport, peptide transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G62200.1); Has 8080 Blast hits to 7668 proteins in 1494 species: Archae - 0; Bacteria - 3960; Metazoa - 799; Fungi - 488; Plants - 2224; Viruses - 0; Other Eukaryotes - 609 (source: NCBI BLink). & (gnl|cdd|36451 : 573.0) no description available & (gnl|cdd|85071 : 302.0) no description available & (reliability: 1644.0) & (original description: Putative ptr1, Description = Peptide transporter, PFAM = PF00854)' T '34.3' 'transport.amino acids' 'nbv0.3scaffold8836_46796-52032' '(at3g30390 : 382.0) Encodes a putative amino acid transporter.; Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT5G38820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36519 : 202.0) no description available & (gnl|cdd|85489 : 91.1) no description available & (reliability: 764.0) & (original description: Putative BnaA04g08850D, Description = BnaA04g08850D protein, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'nbv0.3scaffold12541_1-10363' '(at2g39890 : 220.0) Encodes a proline transporter with affinity for gly betaine, proline and GABA. Protein is expressed in the vascular tissue, specifically the phloem.; proline transporter 1 (PROT1); FUNCTIONS IN: amino acid transmembrane transporter activity, L-proline transmembrane transporter activity; INVOLVED IN: proline transport, amino acid transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: proline transporter 3 (TAIR:AT2G36590.1); Has 1473 Blast hits to 1467 proteins in 157 species: Archae - 0; Bacteria - 4; Metazoa - 93; Fungi - 146; Plants - 1200; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|36517 : 109.0) no description available & (gnl|cdd|85489 : 96.1) no description available & (reliability: 440.0) & (original description: Putative Bet, Description = Betaine/proline transporter, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'nbv0.3scaffold29301_9082-16366' '(at5g41800 : 660.0) Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT1G08230.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36517 : 269.0) no description available & (gnl|cdd|85489 : 183.0) no description available & (reliability: 1320.0) & (original description: Putative At5g41800, Description = Probable GABA transporter 2, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'nbv0.3scaffold35417_13732-21428' '(at1g47670 : 815.0) Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: LYS/HIS transporter 7 (TAIR:AT4G35180.1); Has 1570 Blast hits to 1567 proteins in 175 species: Archae - 0; Bacteria - 20; Metazoa - 174; Fungi - 154; Plants - 1118; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|36517 : 297.0) no description available & (gnl|cdd|85489 : 180.0) no description available & (reliability: 1630.0) & (original description: Putative AATL1, Description = Lysine histidine transporter-like 8, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'nbv0.3scaffold55564_9825-12832' '(at3g30390 : 229.0) Encodes a putative amino acid transporter.; Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT5G38820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36519 : 137.0) no description available & (reliability: 458.0) & (original description: Putative HvANT1, Description = Transmembrane amino acid transporter family protein, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'nbv0.3scaffold59940_4934-9561' '(at2g01170 : 365.0) Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.; bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36503 : 223.0) no description available & (reliability: 730.0) & (original description: Putative BAT1, Description = Uncharacterized amino-acid permease C15C4.04c, PFAM = PF13520)' T '34.3' 'transport.amino acids' 'nbv0.3scaffold64583_2426-9939' '(at2g02040 : 459.0) Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. Expression of the transcripts for this gene can be detected in the embryo through in situ hybridization. This protein does not have nitrate transporter activity based on oocyte transport assays.; peptide transporter 2 (PTR2); FUNCTIONS IN: dipeptide transporter activity, high affinity oligopeptide transporter activity, tripeptide transporter activity, peptide transporter activity, transporter activity; INVOLVED IN: dipeptide transport, tripeptide transport, peptide transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G62200.1); Has 8080 Blast hits to 7668 proteins in 1494 species: Archae - 0; Bacteria - 3960; Metazoa - 799; Fungi - 488; Plants - 2224; Viruses - 0; Other Eukaryotes - 609 (source: NCBI BLink). & (gnl|cdd|36451 : 336.0) no description available & (gnl|cdd|85071 : 151.0) no description available & (reliability: 918.0) & (original description: Putative ptr1, Description = Peptide transporter, PFAM = PF00854)' T '34.3' 'transport.amino acids' 'nbv0.3scaffold73287_6640-8562' '(at3g55740 : 132.0) Encodes a proline transporter with affinity for gly betaine, proline, and GABA. Protein is expressed most highly in the roots.; proline transporter 2 (PROT2); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: proline transporter 1 (TAIR:AT2G39890.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative Bet, Description = Betaine/proline transporter, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'nbv0.3scaffold75408_1-3238' '(at2g42005 : 481.0) Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT4G38250.1); Has 4790 Blast hits to 4701 proteins in 275 species: Archae - 16; Bacteria - 37; Metazoa - 1783; Fungi - 807; Plants - 1311; Viruses - 6; Other Eukaryotes - 830 (source: NCBI BLink). & (gnl|cdd|36518 : 320.0) no description available & (gnl|cdd|85489 : 204.0) no description available & (reliability: 962.0) & (original description: Putative At2g42005, Description = Amino acid transporter ANTL1, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'nbv0.3scaffold75514_2300-8061' '(at5g02180 : 432.0) Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT5G02170.1); Has 5288 Blast hits to 5276 proteins in 360 species: Archae - 20; Bacteria - 185; Metazoa - 1777; Fungi - 1015; Plants - 1487; Viruses - 9; Other Eukaryotes - 795 (source: NCBI BLink). & (gnl|cdd|36517 : 257.0) no description available & (gnl|cdd|85489 : 174.0) no description available & (reliability: 864.0) & (original description: Putative BnaA03g30730D, Description = BnaA03g30730D protein, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'nbv0.3scaffold78327_1-6520' '(at1g05940 : 285.0) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters.; cationic amino acid transporter 9 (CAT9); FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport, transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 4 (TAIR:AT3G03720.1); Has 34191 Blast hits to 33870 proteins in 2358 species: Archae - 527; Bacteria - 27519; Metazoa - 1917; Fungi - 2586; Plants - 410; Viruses - 0; Other Eukaryotes - 1232 (source: NCBI BLink). & (gnl|cdd|36500 : 180.0) no description available & (gnl|cdd|30877 : 85.6) no description available & (reliability: 570.0) & (original description: Putative ctrB, Description = Amino acid permease, PFAM = PF13520)' T '34.3' 'transport.amino acids' 'nbv0.3scaffold85419_2374-6186' '(at1g05940 : 182.0) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters.; cationic amino acid transporter 9 (CAT9); FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport, transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 4 (TAIR:AT3G03720.1); Has 34191 Blast hits to 33870 proteins in 2358 species: Archae - 527; Bacteria - 27519; Metazoa - 1917; Fungi - 2586; Plants - 410; Viruses - 0; Other Eukaryotes - 1232 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative CAT9, Description = Cationic amino acid transporter, PFAM = PF13520)' T '34.3' 'transport.amino acids' 'nbv0.5scaffold32_51657-61830' '(at5g15240 : 426.0) Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT3G28960.1); Has 3693 Blast hits to 2957 proteins in 241 species: Archae - 0; Bacteria - 44; Metazoa - 1493; Fungi - 511; Plants - 1240; Viruses - 0; Other Eukaryotes - 405 (source: NCBI BLink). & (gnl|cdd|36517 : 251.0) no description available & (gnl|cdd|85489 : 162.0) no description available & (reliability: 852.0) & (original description: Putative Bh4, Description = Black hull 4, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'nbv0.5scaffold122_949459-993258' '(at2g41190 : 457.0) Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT2G39130.1); Has 4993 Blast hits to 4959 proteins in 300 species: Archae - 18; Bacteria - 67; Metazoa - 1755; Fungi - 792; Plants - 1459; Viruses - 9; Other Eukaryotes - 893 (source: NCBI BLink). & (gnl|cdd|36517 : 229.0) no description available & (gnl|cdd|85489 : 134.0) no description available & (reliability: 914.0) & (original description: Putative HvANT5, Description = Transmembrane amino acid transporter family protein, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'nbv0.5scaffold122_983645-995640' '(at2g41190 : 572.0) Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT2G39130.1); Has 4993 Blast hits to 4959 proteins in 300 species: Archae - 18; Bacteria - 67; Metazoa - 1755; Fungi - 792; Plants - 1459; Viruses - 9; Other Eukaryotes - 893 (source: NCBI BLink). & (gnl|cdd|36517 : 268.0) no description available & (gnl|cdd|85489 : 166.0) no description available & (reliability: 1144.0) & (original description: Putative glysoja_048606, Description = Vacuolar amino acid transporter 1, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'nbv0.5scaffold1481_99691-105843' '(at2g01170 : 513.0) Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.; bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36503 : 343.0) no description available & (gnl|cdd|30877 : 80.2) no description available & (reliability: 1026.0) & (original description: Putative Os01g0945100, Description = Os01g0945100 protein, PFAM = PF13520)' T '34.3' 'transport.amino acids' 'nbv0.5scaffold2449_72232-79936' '(at2g01170 : 594.0) Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.; bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36503 : 445.0) no description available & (gnl|cdd|84694 : 104.0) no description available & (reliability: 1188.0) & (original description: Putative BAT1, Description = Amino-acid permease BAT1, PFAM = PF13520)' T '34.3' 'transport.amino acids' 'nbv0.5scaffold3632_205758-222934' '(at2g41190 : 562.0) Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT2G39130.1); Has 4993 Blast hits to 4959 proteins in 300 species: Archae - 18; Bacteria - 67; Metazoa - 1755; Fungi - 792; Plants - 1459; Viruses - 9; Other Eukaryotes - 893 (source: NCBI BLink). & (gnl|cdd|36517 : 262.0) no description available & (gnl|cdd|85489 : 175.0) no description available & (reliability: 1124.0) & (original description: Putative HvANT5, Description = Transmembrane amino acid transporter family protein, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'nbv0.5scaffold4185_190144-192971' '(at3g13620 : 352.0) Amino acid permease family protein; FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: Amino acid permease family protein (TAIR:AT5G05630.1); Has 17886 Blast hits to 17873 proteins in 2097 species: Archae - 366; Bacteria - 15000; Metazoa - 906; Fungi - 363; Plants - 550; Viruses - 0; Other Eukaryotes - 701 (source: NCBI BLink). & (gnl|cdd|36501 : 191.0) no description available & (reliability: 704.0) & (original description: Putative HvLAT3, Description = Putative polyamine uptake transporter, PFAM = PF13520)' T '34.3' 'transport.amino acids' 'nbv0.5scaffold6276_1-10806' '(at5g02180 : 462.0) Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT5G02170.1); Has 5288 Blast hits to 5276 proteins in 360 species: Archae - 20; Bacteria - 185; Metazoa - 1777; Fungi - 1015; Plants - 1487; Viruses - 9; Other Eukaryotes - 795 (source: NCBI BLink). & (gnl|cdd|36517 : 276.0) no description available & (gnl|cdd|85489 : 185.0) no description available & (reliability: 924.0) & (original description: Putative At5g02170, Description = AT5g02170/T7H20_220, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'nbv0.5scaffold7359_61762-67184' '(at1g71680 : 459.0) Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: lysine histidine transporter 1 (TAIR:AT5G40780.2); Has 4295 Blast hits to 4286 proteins in 279 species: Archae - 3; Bacteria - 60; Metazoa - 1288; Fungi - 708; Plants - 1649; Viruses - 2; Other Eukaryotes - 585 (source: NCBI BLink). & (gnl|cdd|36517 : 326.0) no description available & (gnl|cdd|85489 : 251.0) no description available & (reliability: 918.0) & (original description: Putative At1g71680, Description = Lysine histidine transporter-like 5, PFAM = PF03222;PF01490)' T '34.3' 'transport.amino acids' 'nbv0.5scaffold8343_32444-38085' '(at2g39130 : 682.0) Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT3G54830.1); Has 5002 Blast hits to 4966 proteins in 291 species: Archae - 22; Bacteria - 61; Metazoa - 1689; Fungi - 998; Plants - 1489; Viruses - 3; Other Eukaryotes - 740 (source: NCBI BLink). & (gnl|cdd|36517 : 298.0) no description available & (gnl|cdd|85489 : 198.0) no description available & (reliability: 1364.0) & (original description: Putative HvANT5, Description = Putative aromatic and neutral amino acid transporter, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben044scf00000517ctg009_1-5207' '(gnl|cdd|36451 : 554.0) no description available & (at5g01180 : 516.0) Encodes a dipeptide transporter expressed in pollen and ovules during early seed development. GFP-tagged PTR5 localizes to the plasma membrane.; peptide transporter 5 (PTR5); CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 1 (TAIR:AT3G54140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85071 : 255.0) no description available & (reliability: 1014.0) & (original description: Putative ptr1, Description = Peptide transporter, PFAM = PF00854)' T '34.3' 'transport.amino acids' 'niben044scf00001800ctg005_486-9402' '(at1g25530 : 639.0) Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: lysine histidine transporter 1 (TAIR:AT5G40780.1); Has 3229 Blast hits to 3219 proteins in 255 species: Archae - 4; Bacteria - 28; Metazoa - 882; Fungi - 529; Plants - 1538; Viruses - 0; Other Eukaryotes - 248 (source: NCBI BLink). & (gnl|cdd|36517 : 395.0) no description available & (gnl|cdd|85489 : 322.0) no description available & (reliability: 1278.0) & (original description: Putative LHT1, Description = Lysine histidine transporter 1, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben044scf00003239ctg009_1-3042' '(at1g31830 : 577.0) Amino acid permease family protein; FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: Amino acid permease family protein (TAIR:AT1G31820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36501 : 305.0) no description available & (gnl|cdd|30877 : 101.0) no description available & (reliability: 1154.0) & (original description: Putative aoc4, Description = Neutral amino acid transporter, PFAM = PF13520)' T '34.3' 'transport.amino acids' 'niben044scf00003504ctg007_2839-8991' '(at2g01170 : 607.0) Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.; bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36503 : 465.0) no description available & (gnl|cdd|30877 : 105.0) no description available & (reliability: 1214.0) & (original description: Putative BAT1, Description = Amino-acid permease BAT1, PFAM = PF13520)' T '34.3' 'transport.amino acids' 'niben044scf00003504ctg009_5607-9761' '(at2g01170 : 139.0) Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.; bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36503 : 121.0) no description available & (reliability: 278.0) & (original description: Putative plaP, Description = Amino acid permease, PFAM = PF13520)' T '34.3' 'transport.amino acids' 'niben044scf00003508ctg021_623-5394' '(at5g23810 : 266.0) Encodes nonfunctional amino acid transporter. AAP7 is the most distantly related member of the AAP family, a group of well characterized amino acid transporters within the ATF1 superfamily. Expression of this gene has not been detected with RNA gel blots or promoter GUS studies.; amino acid permease 7 (AAP7); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 3 (TAIR:AT1G77380.1); Has 1654 Blast hits to 1648 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 179; Fungi - 204; Plants - 1055; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|36517 : 154.0) no description available & (gnl|cdd|85489 : 129.0) no description available & (reliability: 532.0) & (original description: Putative aap, Description = Putative amino acid permease, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben044scf00004976ctg017_1-21140' '(at5g40780 : 603.0) Encodes LHT1 (lysine histidine transporter), a high-affinity transporter for cellular amino acid uptake in both root epidermis and leaf mesophyll.; lysine histidine transporter 1; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport, response to karrikin, amino acid import; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT1G48640.1); Has 4130 Blast hits to 4123 proteins in 343 species: Archae - 7; Bacteria - 195; Metazoa - 1180; Fungi - 628; Plants - 1642; Viruses - 0; Other Eukaryotes - 478 (source: NCBI BLink). & (gnl|cdd|36517 : 391.0) no description available & (gnl|cdd|85489 : 324.0) no description available & (reliability: 1206.0) & (original description: Putative LHT1, Description = Lysine histidine transporter 1, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben044scf00006203ctg008_14113-17741' '(at3g55740 : 369.0) Encodes a proline transporter with affinity for gly betaine, proline, and GABA. Protein is expressed most highly in the roots.; proline transporter 2 (PROT2); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: proline transporter 1 (TAIR:AT2G39890.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36517 : 174.0) no description available & (gnl|cdd|85489 : 138.0) no description available & (reliability: 738.0) & (original description: Putative Bet, Description = Betaine/proline transporter, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben044scf00011178ctg006_9558-13268' '(at3g30390 : 275.0) Encodes a putative amino acid transporter.; Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT5G38820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36519 : 149.0) no description available & (gnl|cdd|85489 : 93.0) no description available & (reliability: 550.0) & (original description: Putative HvANT1, Description = Transmembrane amino acid transporter family protein, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben044scf00017793ctg003_1-2849' '(at5g49630 : 366.0) Is a high affinity amino acid transporter capable of transporting aspartate and tryptophan. May be involved in the amino acid uptake from xylem.; amino acid permease 6 (AAP6); FUNCTIONS IN: acidic amino acid transmembrane transporter activity, neutral amino acid transmembrane transporter activity, amino acid transmembrane transporter activity; INVOLVED IN: response to water deprivation, response to salt stress, aspartate transport, tryptophan transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 1 (TAIR:AT1G58360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36517 : 202.0) no description available & (gnl|cdd|85489 : 175.0) no description available & (reliability: 732.0) & (original description: Putative AAPA, Description = Amino acid transporter a, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben044scf00018981ctg024_755-9274' '(at1g58030 : 838.0) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Localized to the tonoplast.; cationic amino acid transporter 2 (CAT2); FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport, transport, transmembrane transport; LOCATED IN: plant-type vacuole membrane, plasma membrane, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 3 (TAIR:AT5G36940.1); Has 37076 Blast hits to 34712 proteins in 2307 species: Archae - 552; Bacteria - 29543; Metazoa - 2357; Fungi - 2838; Plants - 508; Viruses - 0; Other Eukaryotes - 1278 (source: NCBI BLink). & (gnl|cdd|36500 : 318.0) no description available & (gnl|cdd|30877 : 177.0) no description available & (reliability: 1676.0) & (original description: Putative CAT2, Description = Cationic amino acid transporter 2, vacuolar, PFAM = PF13906;PF13520)' T '34.3' 'transport.amino acids' 'niben044scf00036137ctg001_1-11780' '(at2g39890 : 140.0) Encodes a proline transporter with affinity for gly betaine, proline and GABA. Protein is expressed in the vascular tissue, specifically the phloem.; proline transporter 1 (PROT1); FUNCTIONS IN: amino acid transmembrane transporter activity, L-proline transmembrane transporter activity; INVOLVED IN: proline transport, amino acid transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: proline transporter 3 (TAIR:AT2G36590.1); Has 1473 Blast hits to 1467 proteins in 157 species: Archae - 0; Bacteria - 4; Metazoa - 93; Fungi - 146; Plants - 1200; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|36517 : 85.7) no description available & (reliability: 280.0) & (original description: Putative Bet, Description = Betaine/proline transporter, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben044scf00038798ctg000_4341-10802' '(at5g49630 : 619.0) Is a high affinity amino acid transporter capable of transporting aspartate and tryptophan. May be involved in the amino acid uptake from xylem.; amino acid permease 6 (AAP6); FUNCTIONS IN: acidic amino acid transmembrane transporter activity, neutral amino acid transmembrane transporter activity, amino acid transmembrane transporter activity; INVOLVED IN: response to water deprivation, response to salt stress, aspartate transport, tryptophan transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 1 (TAIR:AT1G58360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36517 : 329.0) no description available & (gnl|cdd|85489 : 296.0) no description available & (reliability: 1238.0) & (original description: Putative AAP6, Description = Amino acid permease 6, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben044scf00040487ctg001_432-5665' '(at1g47670 : 514.0) Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: LYS/HIS transporter 7 (TAIR:AT4G35180.1); Has 1570 Blast hits to 1567 proteins in 175 species: Archae - 0; Bacteria - 20; Metazoa - 174; Fungi - 154; Plants - 1118; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|36517 : 271.0) no description available & (gnl|cdd|85489 : 183.0) no description available & (reliability: 1028.0) & (original description: Putative AATL1, Description = Lysine histidine transporter-like 8, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben044scf00044363ctg006_4268-9249' '(at1g31830 : 637.0) Amino acid permease family protein; FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: Amino acid permease family protein (TAIR:AT1G31820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36501 : 337.0) no description available & (gnl|cdd|30877 : 121.0) no description available & (reliability: 1274.0) & (original description: Putative aoc4, Description = Neutral amino acid transporter, PFAM = PF13520)' T '34.3' 'transport.amino acids' 'niben044scf00045343ctg000_1-10892' '(at1g58030 : 803.0) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Localized to the tonoplast.; cationic amino acid transporter 2 (CAT2); FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport, transport, transmembrane transport; LOCATED IN: plant-type vacuole membrane, plasma membrane, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 3 (TAIR:AT5G36940.1); Has 37076 Blast hits to 34712 proteins in 2307 species: Archae - 552; Bacteria - 29543; Metazoa - 2357; Fungi - 2838; Plants - 508; Viruses - 0; Other Eukaryotes - 1278 (source: NCBI BLink). & (gnl|cdd|36500 : 316.0) no description available & (gnl|cdd|30877 : 173.0) no description available & (reliability: 1606.0) & (original description: Putative CAT2, Description = Cationic amino acid transporter 2, vacuolar, PFAM = PF13520;PF13906)' T '34.3' 'transport.amino acids' 'niben044scf00051956ctg003_1-3307' '(at3g19553 : 607.0) Amino acid permease family protein; FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport, transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: Amino acid permease family protein (TAIR:AT1G31830.1); Has 17325 Blast hits to 17313 proteins in 2020 species: Archae - 295; Bacteria - 14688; Metazoa - 803; Fungi - 534; Plants - 429; Viruses - 0; Other Eukaryotes - 576 (source: NCBI BLink). & (gnl|cdd|36501 : 312.0) no description available & (gnl|cdd|30877 : 111.0) no description available & (reliability: 1214.0) & (original description: Putative aoc4, Description = Neutral amino acid transporter, PFAM = PF13520)' T '34.3' 'transport.amino acids' 'niben044scf00059052ctg005_737-7893' '(at1g31830 : 678.0) Amino acid permease family protein; FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: Amino acid permease family protein (TAIR:AT1G31820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36501 : 344.0) no description available & (gnl|cdd|30877 : 126.0) no description available & (reliability: 1356.0) & (original description: Putative aoc4, Description = Neutral amino acid transporter, PFAM = PF13520)' T '34.3' 'transport.amino acids' 'niben101scf00136_828-36640' '(at5g15240 : 394.0) Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT3G28960.1); Has 3693 Blast hits to 2957 proteins in 241 species: Archae - 0; Bacteria - 44; Metazoa - 1493; Fungi - 511; Plants - 1240; Viruses - 0; Other Eukaryotes - 405 (source: NCBI BLink). & (gnl|cdd|36517 : 242.0) no description available & (gnl|cdd|85489 : 143.0) no description available & (reliability: 788.0) & (original description: Putative Bh4, Description = Black hull 4, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf00348_1398975-1405380' '(q9fel7|lax2_medtr : 773.0) Auxin transporter-like protein 2 (AUX1-like protein 2) (MtLAX2) - Medicago truncatula (Barrel medic) & (at2g38120 : 759.0) Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning.; AUXIN RESISTANT 1 (AUX1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUXIN RESISTANT 1 (TAIR:AT5G01240.1); Has 1256 Blast hits to 1251 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 283; Plants - 825; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|36517 : 309.0) no description available & (gnl|cdd|85489 : 224.0) no description available & (reliability: 1480.0) & (original description: Putative LAX4, Description = Auxin transporter-like protein 4, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf00381_866151-869425' '(at2g42005 : 501.0) Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT4G38250.1); Has 4790 Blast hits to 4701 proteins in 275 species: Archae - 16; Bacteria - 37; Metazoa - 1783; Fungi - 807; Plants - 1311; Viruses - 6; Other Eukaryotes - 830 (source: NCBI BLink). & (gnl|cdd|36518 : 315.0) no description available & (gnl|cdd|85489 : 190.0) no description available & (reliability: 1002.0) & (original description: Putative At2g42005, Description = Amino acid transporter ANTL1, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf00381_892986-896254' '(at4g38250 : 435.0) Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT2G42005.1); Has 5006 Blast hits to 4918 proteins in 286 species: Archae - 16; Bacteria - 54; Metazoa - 1812; Fungi - 943; Plants - 1365; Viruses - 6; Other Eukaryotes - 810 (source: NCBI BLink). & (gnl|cdd|36518 : 299.0) no description available & (gnl|cdd|85489 : 181.0) no description available & (reliability: 870.0) & (original description: Putative At2g42005, Description = Transmembrane amino acid transporter family protein, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf00428_1118592-1122467' '(at1g31830 : 633.0) Amino acid permease family protein; FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: Amino acid permease family protein (TAIR:AT1G31820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36501 : 337.0) no description available & (gnl|cdd|30877 : 112.0) no description available & (reliability: 1266.0) & (original description: Putative aoc4, Description = Neutral amino acid transporter, PFAM = PF13520)' T '34.3' 'transport.amino acids' 'niben101scf00571_568604-572022' '(at3g13620 : 625.0) Amino acid permease family protein; FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: Amino acid permease family protein (TAIR:AT5G05630.1); Has 17886 Blast hits to 17873 proteins in 2097 species: Archae - 366; Bacteria - 15000; Metazoa - 906; Fungi - 363; Plants - 550; Viruses - 0; Other Eukaryotes - 701 (source: NCBI BLink). & (gnl|cdd|36501 : 295.0) no description available & (gnl|cdd|30877 : 94.4) no description available & (reliability: 1250.0) & (original description: Putative aoc4, Description = Neutral amino acid transporter, PFAM = PF13520)' T '34.3' 'transport.amino acids' 'niben101scf00654_396056-400281' '(at5g23810 : 540.0) Encodes nonfunctional amino acid transporter. AAP7 is the most distantly related member of the AAP family, a group of well characterized amino acid transporters within the ATF1 superfamily. Expression of this gene has not been detected with RNA gel blots or promoter GUS studies.; amino acid permease 7 (AAP7); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 3 (TAIR:AT1G77380.1); Has 1654 Blast hits to 1648 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 179; Fungi - 204; Plants - 1055; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|36517 : 328.0) no description available & (gnl|cdd|85489 : 281.0) no description available & (reliability: 1080.0) & (original description: Putative AAP7, Description = Probable amino acid permease 7, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf00654_396221-407142' '(at5g23810 : 508.0) Encodes nonfunctional amino acid transporter. AAP7 is the most distantly related member of the AAP family, a group of well characterized amino acid transporters within the ATF1 superfamily. Expression of this gene has not been detected with RNA gel blots or promoter GUS studies.; amino acid permease 7 (AAP7); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 3 (TAIR:AT1G77380.1); Has 1654 Blast hits to 1648 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 179; Fungi - 204; Plants - 1055; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|36517 : 291.0) no description available & (gnl|cdd|85489 : 250.0) no description available & (reliability: 1016.0) & (original description: Putative AAP7, Description = Probable amino acid permease 7, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf00654_419145-424881' '(at5g23810 : 483.0) Encodes nonfunctional amino acid transporter. AAP7 is the most distantly related member of the AAP family, a group of well characterized amino acid transporters within the ATF1 superfamily. Expression of this gene has not been detected with RNA gel blots or promoter GUS studies.; amino acid permease 7 (AAP7); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 3 (TAIR:AT1G77380.1); Has 1654 Blast hits to 1648 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 179; Fungi - 204; Plants - 1055; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|36517 : 286.0) no description available & (gnl|cdd|85489 : 249.0) no description available & (reliability: 966.0) & (original description: Putative AAP7, Description = Probable amino acid permease 7, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf00654_419192-423824' '(at5g23810 : 270.0) Encodes nonfunctional amino acid transporter. AAP7 is the most distantly related member of the AAP family, a group of well characterized amino acid transporters within the ATF1 superfamily. Expression of this gene has not been detected with RNA gel blots or promoter GUS studies.; amino acid permease 7 (AAP7); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 3 (TAIR:AT1G77380.1); Has 1654 Blast hits to 1648 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 179; Fungi - 204; Plants - 1055; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink). & (gnl|cdd|36517 : 157.0) no description available & (gnl|cdd|85489 : 131.0) no description available & (reliability: 540.0) & (original description: Putative aap, Description = Putative amino acid permease, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf00799_671658-678896' '(at1g77380 : 618.0) Amino acid permease which transports basic amino acids.; amino acid permease 3 (AAP3); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 2 (TAIR:AT5G09220.1); Has 2346 Blast hits to 2332 proteins in 227 species: Archae - 0; Bacteria - 15; Metazoa - 394; Fungi - 322; Plants - 1373; Viruses - 0; Other Eukaryotes - 242 (source: NCBI BLink). & (gnl|cdd|36517 : 345.0) no description available & (gnl|cdd|85489 : 299.0) no description available & (reliability: 1236.0) & (original description: Putative aap1, Description = Transmembrane amino acid transporter family protein, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf00819_806781-809723' '(at3g56200 : 239.0) Encodes a putative amino acid transporter.; Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT2G40420.1); Has 4348 Blast hits to 4307 proteins in 431 species: Archae - 11; Bacteria - 411; Metazoa - 1511; Fungi - 660; Plants - 875; Viruses - 3; Other Eukaryotes - 877 (source: NCBI BLink). & (gnl|cdd|36519 : 136.0) no description available & (reliability: 478.0) & (original description: Putative AAT, Description = Transmembrane amino acid transporter family protein, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf00912_255399-261217' '(at3g10600 : 769.0) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters.; cationic amino acid transporter 7 (CAT7); FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 6 (TAIR:AT5G04770.1); Has 33338 Blast hits to 33265 proteins in 2295 species: Archae - 501; Bacteria - 26895; Metazoa - 1960; Fungi - 2417; Plants - 365; Viruses - 0; Other Eukaryotes - 1200 (source: NCBI BLink). & (gnl|cdd|36500 : 334.0) no description available & (gnl|cdd|30877 : 147.0) no description available & (reliability: 1538.0) & (original description: Putative CAT7, Description = Cationic amino acid transporter 7, chloroplastic, PFAM = PF13520;PF13906)' T '34.3' 'transport.amino acids' 'niben101scf00917_442957-447856' '(at5g40780 : 615.0) Encodes LHT1 (lysine histidine transporter), a high-affinity transporter for cellular amino acid uptake in both root epidermis and leaf mesophyll.; lysine histidine transporter 1; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport, response to karrikin, amino acid import; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT1G48640.1); Has 4130 Blast hits to 4123 proteins in 343 species: Archae - 7; Bacteria - 195; Metazoa - 1180; Fungi - 628; Plants - 1642; Viruses - 0; Other Eukaryotes - 478 (source: NCBI BLink). & (gnl|cdd|36517 : 400.0) no description available & (gnl|cdd|85489 : 309.0) no description available & (reliability: 1230.0) & (original description: Putative NSAAP1, Description = Amino acid permease, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf01001_200087-205509' '(at1g71680 : 498.0) Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: lysine histidine transporter 1 (TAIR:AT5G40780.2); Has 4295 Blast hits to 4286 proteins in 279 species: Archae - 3; Bacteria - 60; Metazoa - 1288; Fungi - 708; Plants - 1649; Viruses - 2; Other Eukaryotes - 585 (source: NCBI BLink). & (gnl|cdd|36517 : 358.0) no description available & (gnl|cdd|85489 : 276.0) no description available & (reliability: 996.0) & (original description: Putative At1g71680, Description = Lysine histidine transporter-like 5, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf01054_1284803-1288212' '(at1g80510 : 582.0) Encodes a close relative of the amino acid transporter ANT1 (AT3G11900).; Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT5G38820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36519 : 286.0) no description available & (gnl|cdd|85489 : 153.0) no description available & (reliability: 1164.0) & (original description: Putative AAT, Description = Putative amino acid transporter, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf01061_114641-123583' '(at4g21120 : 806.0) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system.; amino acid transporter 1 (AAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, cationic amino acid transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: basic amino acid transport, L-arginine import, L-glutamate import; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Cationic amino acid transport permease (InterPro:IPR004755), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 5 (TAIR:AT2G34960.1); Has 31468 Blast hits to 31317 proteins in 2259 species: Archae - 510; Bacteria - 25893; Metazoa - 1955; Fungi - 1722; Plants - 342; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink). & (gnl|cdd|36500 : 340.0) no description available & (gnl|cdd|30877 : 163.0) no description available & (reliability: 1612.0) & (original description: Putative CAT1, Description = Cationic amino acid transporter 1, PFAM = PF13906;PF13520)' T '34.3' 'transport.amino acids' 'niben101scf01072_280679-291562' '(at5g04770 : 211.0) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs. Expressed in sink tissues. Induced during infestation of roots by the plant parasitic root-knot nematode, Meloidogyne incognita. Localized in the plasma membrane.; cationic amino acid transporter 6 (CAT6); CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 7 (TAIR:AT3G10600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36500 : 122.0) no description available & (reliability: 422.0) & (original description: Putative BnaA03g42920D, Description = BnaA03g42920D protein, PFAM = PF13520;PF13520;PF13906)' T '34.3' 'transport.amino acids' 'niben101scf01101_265614-271484' '(q9fel7|lax2_medtr : 777.0) Auxin transporter-like protein 2 (AUX1-like protein 2) (MtLAX2) - Medicago truncatula (Barrel medic) & (at2g38120 : 756.0) Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning.; AUXIN RESISTANT 1 (AUX1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUXIN RESISTANT 1 (TAIR:AT5G01240.1); Has 1256 Blast hits to 1251 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 283; Plants - 825; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|36517 : 311.0) no description available & (gnl|cdd|85489 : 223.0) no description available & (reliability: 1478.0) & (original description: Putative LAX4, Description = Auxin transporter-like protein 4, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf01124_2808187-2814186' '(at3g10600 : 427.0) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters.; cationic amino acid transporter 7 (CAT7); FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 6 (TAIR:AT5G04770.1); Has 33338 Blast hits to 33265 proteins in 2295 species: Archae - 501; Bacteria - 26895; Metazoa - 1960; Fungi - 2417; Plants - 365; Viruses - 0; Other Eukaryotes - 1200 (source: NCBI BLink). & (gnl|cdd|36500 : 296.0) no description available & (gnl|cdd|30877 : 139.0) no description available & (reliability: 854.0) & (original description: Putative Sb06g024120, Description = Putative uncharacterized protein Sb06g024120, PFAM = PF13520;PF13906)' T '34.3' 'transport.amino acids' 'niben101scf01237_1079310-1083338' '(at3g56200 : 419.0) Encodes a putative amino acid transporter.; Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT2G40420.1); Has 4348 Blast hits to 4307 proteins in 431 species: Archae - 11; Bacteria - 411; Metazoa - 1511; Fungi - 660; Plants - 875; Viruses - 3; Other Eukaryotes - 877 (source: NCBI BLink). & (gnl|cdd|36519 : 244.0) no description available & (gnl|cdd|85489 : 123.0) no description available & (reliability: 838.0) & (original description: Putative HvANT1, Description = Putative aromatic and neutral amino acid transporter, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf01267_1458339-1465433' '(at5g40780 : 624.0) Encodes LHT1 (lysine histidine transporter), a high-affinity transporter for cellular amino acid uptake in both root epidermis and leaf mesophyll.; lysine histidine transporter 1; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport, response to karrikin, amino acid import; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT1G48640.1); Has 4130 Blast hits to 4123 proteins in 343 species: Archae - 7; Bacteria - 195; Metazoa - 1180; Fungi - 628; Plants - 1642; Viruses - 0; Other Eukaryotes - 478 (source: NCBI BLink). & (gnl|cdd|36517 : 401.0) no description available & (gnl|cdd|85489 : 314.0) no description available & (reliability: 1248.0) & (original description: Putative LHT1, Description = Lysine histidine transporter 1, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf01281_851756-855540' '(at4g21120 : 802.0) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system.; amino acid transporter 1 (AAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, cationic amino acid transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: basic amino acid transport, L-arginine import, L-glutamate import; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Cationic amino acid transport permease (InterPro:IPR004755), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 5 (TAIR:AT2G34960.1); Has 31468 Blast hits to 31317 proteins in 2259 species: Archae - 510; Bacteria - 25893; Metazoa - 1955; Fungi - 1722; Plants - 342; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink). & (gnl|cdd|36500 : 350.0) no description available & (gnl|cdd|30877 : 172.0) no description available & (reliability: 1604.0) & (original description: Putative Sb01g013690, Description = Putative uncharacterized protein Sb01g013690, PFAM = PF13906;PF13520)' T '34.3' 'transport.amino acids' 'niben101scf01395_599493-603223' '(at4g21120 : 762.0) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system.; amino acid transporter 1 (AAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, cationic amino acid transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: basic amino acid transport, L-arginine import, L-glutamate import; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Cationic amino acid transport permease (InterPro:IPR004755), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 5 (TAIR:AT2G34960.1); Has 31468 Blast hits to 31317 proteins in 2259 species: Archae - 510; Bacteria - 25893; Metazoa - 1955; Fungi - 1722; Plants - 342; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink). & (gnl|cdd|36500 : 328.0) no description available & (gnl|cdd|30877 : 150.0) no description available & (reliability: 1524.0) & (original description: Putative AAT1, Description = Cationic amino acid transporter 1, PFAM = PF13906;PF13520)' T '34.3' 'transport.amino acids' 'niben101scf01519_289360-294985' '(at2g39130 : 655.0) Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT3G54830.1); Has 5002 Blast hits to 4966 proteins in 291 species: Archae - 22; Bacteria - 61; Metazoa - 1689; Fungi - 998; Plants - 1489; Viruses - 3; Other Eukaryotes - 740 (source: NCBI BLink). & (gnl|cdd|36517 : 300.0) no description available & (gnl|cdd|85489 : 199.0) no description available & (reliability: 1310.0) & (original description: Putative HvANT5, Description = Putative aromatic and neutral amino acid transporter, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf01563_391375-409571' '(at1g05940 : 581.0) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters.; cationic amino acid transporter 9 (CAT9); FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport, transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 4 (TAIR:AT3G03720.1); Has 34191 Blast hits to 33870 proteins in 2358 species: Archae - 527; Bacteria - 27519; Metazoa - 1917; Fungi - 2586; Plants - 410; Viruses - 0; Other Eukaryotes - 1232 (source: NCBI BLink). & (gnl|cdd|36500 : 287.0) no description available & (gnl|cdd|30877 : 144.0) no description available & (reliability: 1162.0) & (original description: Putative CAT9, Description = Cationic amino acid transporter 9, chloroplastic, PFAM = PF13520;PF13906)' T '34.3' 'transport.amino acids' 'niben101scf01721_893672-898060' '(at4g21120 : 806.0) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system.; amino acid transporter 1 (AAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, cationic amino acid transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: basic amino acid transport, L-arginine import, L-glutamate import; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Cationic amino acid transport permease (InterPro:IPR004755), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 5 (TAIR:AT2G34960.1); Has 31468 Blast hits to 31317 proteins in 2259 species: Archae - 510; Bacteria - 25893; Metazoa - 1955; Fungi - 1722; Plants - 342; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink). & (gnl|cdd|36500 : 338.0) no description available & (gnl|cdd|30877 : 160.0) no description available & (reliability: 1612.0) & (original description: Putative CAT1, Description = Cationic amino acid transporter 1, PFAM = PF13906;PF13520)' T '34.3' 'transport.amino acids' 'niben101scf01888_596040-601693' '(at1g77380 : 655.0) Amino acid permease which transports basic amino acids.; amino acid permease 3 (AAP3); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 2 (TAIR:AT5G09220.1); Has 2346 Blast hits to 2332 proteins in 227 species: Archae - 0; Bacteria - 15; Metazoa - 394; Fungi - 322; Plants - 1373; Viruses - 0; Other Eukaryotes - 242 (source: NCBI BLink). & (gnl|cdd|36517 : 356.0) no description available & (gnl|cdd|85489 : 308.0) no description available & (reliability: 1310.0) & (original description: Putative AAP5, Description = Amino acid permease 5, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf02044_34813-39114' '(at3g19553 : 621.0) Amino acid permease family protein; FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport, transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: Amino acid permease family protein (TAIR:AT1G31830.1); Has 17325 Blast hits to 17313 proteins in 2020 species: Archae - 295; Bacteria - 14688; Metazoa - 803; Fungi - 534; Plants - 429; Viruses - 0; Other Eukaryotes - 576 (source: NCBI BLink). & (gnl|cdd|36501 : 321.0) no description available & (gnl|cdd|30877 : 115.0) no description available & (reliability: 1242.0) & (original description: Putative aoc4, Description = Neutral amino acid transporter, PFAM = PF13520)' T '34.3' 'transport.amino acids' 'niben101scf02082_30652-35708' '(at1g17120 : 709.0) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs.; cationic amino acid transporter 8 (CAT8); FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: intracellular membrane-bounded organelle, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 5 (TAIR:AT2G34960.1); Has 31846 Blast hits to 31753 proteins in 2313 species: Archae - 496; Bacteria - 26086; Metazoa - 1876; Fungi - 1926; Plants - 406; Viruses - 0; Other Eukaryotes - 1056 (source: NCBI BLink). & (gnl|cdd|36500 : 309.0) no description available & (gnl|cdd|30877 : 157.0) no description available & (reliability: 1418.0) & (original description: Putative CAT8, Description = Cationic amino acid transporter 8, vacuolar, PFAM = PF13906;PF13520)' T '34.3' 'transport.amino acids' 'niben101scf02170_13544-18409' '(at1g71680 : 507.0) Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: lysine histidine transporter 1 (TAIR:AT5G40780.2); Has 4295 Blast hits to 4286 proteins in 279 species: Archae - 3; Bacteria - 60; Metazoa - 1288; Fungi - 708; Plants - 1649; Viruses - 2; Other Eukaryotes - 585 (source: NCBI BLink). & (gnl|cdd|36517 : 351.0) no description available & (gnl|cdd|85489 : 276.0) no description available & (reliability: 1014.0) & (original description: Putative At1g71680, Description = Lysine histidine transporter-like 5, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf02197_498086-503730' '(at1g77380 : 709.0) Amino acid permease which transports basic amino acids.; amino acid permease 3 (AAP3); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 2 (TAIR:AT5G09220.1); Has 2346 Blast hits to 2332 proteins in 227 species: Archae - 0; Bacteria - 15; Metazoa - 394; Fungi - 322; Plants - 1373; Viruses - 0; Other Eukaryotes - 242 (source: NCBI BLink). & (gnl|cdd|36517 : 352.0) no description available & (gnl|cdd|85489 : 317.0) no description available & (reliability: 1418.0) & (original description: Putative aap1, Description = Amino acid carrier, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf02240_356112-362458' '(at1g31830 : 649.0) Amino acid permease family protein; FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: Amino acid permease family protein (TAIR:AT1G31820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36501 : 340.0) no description available & (gnl|cdd|30877 : 119.0) no description available & (reliability: 1298.0) & (original description: Putative aoc4, Description = Neutral amino acid transporter, PFAM = PF13520)' T '34.3' 'transport.amino acids' 'niben101scf02269_393377-401777' '(q9fel7|lax2_medtr : 826.0) Auxin transporter-like protein 2 (AUX1-like protein 2) (MtLAX2) - Medicago truncatula (Barrel medic) & (at2g38120 : 798.0) Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning.; AUXIN RESISTANT 1 (AUX1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUXIN RESISTANT 1 (TAIR:AT5G01240.1); Has 1256 Blast hits to 1251 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 283; Plants - 825; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|36517 : 309.0) no description available & (gnl|cdd|85489 : 225.0) no description available & (reliability: 1552.0) & (original description: Putative LAX2, Description = Auxin transporter-like protein 2, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf02280_88942-103135' '(at2g39890 : 536.0) Encodes a proline transporter with affinity for gly betaine, proline and GABA. Protein is expressed in the vascular tissue, specifically the phloem.; proline transporter 1 (PROT1); FUNCTIONS IN: amino acid transmembrane transporter activity, L-proline transmembrane transporter activity; INVOLVED IN: proline transport, amino acid transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: proline transporter 3 (TAIR:AT2G36590.1); Has 1473 Blast hits to 1467 proteins in 157 species: Archae - 0; Bacteria - 4; Metazoa - 93; Fungi - 146; Plants - 1200; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|36517 : 253.0) no description available & (gnl|cdd|85489 : 214.0) no description available & (reliability: 1072.0) & (original description: Putative PROT1, Description = Proline transporter 1, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf02348_1025405-1033231' '(at5g49630 : 630.0) Is a high affinity amino acid transporter capable of transporting aspartate and tryptophan. May be involved in the amino acid uptake from xylem.; amino acid permease 6 (AAP6); FUNCTIONS IN: acidic amino acid transmembrane transporter activity, neutral amino acid transmembrane transporter activity, amino acid transmembrane transporter activity; INVOLVED IN: response to water deprivation, response to salt stress, aspartate transport, tryptophan transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 1 (TAIR:AT1G58360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36517 : 326.0) no description available & (gnl|cdd|85489 : 278.0) no description available & (reliability: 1260.0) & (original description: Putative AAP6, Description = Amino acid permease 6, PFAM = PF01490;PF01490)' T '34.3' 'transport.amino acids' 'niben101scf02500_231436-234869' '(at3g13620 : 603.0) Amino acid permease family protein; FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: Amino acid permease family protein (TAIR:AT5G05630.1); Has 17886 Blast hits to 17873 proteins in 2097 species: Archae - 366; Bacteria - 15000; Metazoa - 906; Fungi - 363; Plants - 550; Viruses - 0; Other Eukaryotes - 701 (source: NCBI BLink). & (gnl|cdd|36501 : 300.0) no description available & (gnl|cdd|30877 : 101.0) no description available & (reliability: 1206.0) & (original description: Putative aoc4, Description = Amino acid transporter, putative, PFAM = PF13520)' T '34.3' 'transport.amino acids' 'niben101scf02621_268737-277012' '(at5g49630 : 615.0) Is a high affinity amino acid transporter capable of transporting aspartate and tryptophan. May be involved in the amino acid uptake from xylem.; amino acid permease 6 (AAP6); FUNCTIONS IN: acidic amino acid transmembrane transporter activity, neutral amino acid transmembrane transporter activity, amino acid transmembrane transporter activity; INVOLVED IN: response to water deprivation, response to salt stress, aspartate transport, tryptophan transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 1 (TAIR:AT1G58360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36517 : 329.0) no description available & (gnl|cdd|85489 : 294.0) no description available & (reliability: 1230.0) & (original description: Putative AAP8, Description = Amino acid permease 8, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf02658_202562-215982' '(at2g21050 : 793.0) Encodes LAX2 (LIKE AUXIN RESISTANT), a member of the AUX1 LAX family of auxin influx carriers. Required for the establishment of embryonic root cell organization.; like AUXIN RESISTANT 2 (LAX2); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUX1 3 (TAIR:AT1G77690.1); Has 1017 Blast hits to 1012 proteins in 134 species: Archae - 0; Bacteria - 2; Metazoa - 94; Fungi - 224; Plants - 668; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (q8l883|lax5_medtr : 793.0) Auxin transporter-like protein 5 (AUX1-like protein 5) (MtLAX5) - Medicago truncatula (Barrel medic) & (gnl|cdd|36517 : 297.0) no description available & (gnl|cdd|85489 : 200.0) no description available & (reliability: 1586.0) & (original description: Putative LAX5, Description = Auxin transporter-like protein 5, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf02665_135423-143326' '(at2g02040 : 797.0) Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. Expression of the transcripts for this gene can be detected in the embryo through in situ hybridization. This protein does not have nitrate transporter activity based on oocyte transport assays.; peptide transporter 2 (PTR2); FUNCTIONS IN: dipeptide transporter activity, high affinity oligopeptide transporter activity, tripeptide transporter activity, peptide transporter activity, transporter activity; INVOLVED IN: dipeptide transport, tripeptide transport, peptide transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G62200.1); Has 8080 Blast hits to 7668 proteins in 1494 species: Archae - 0; Bacteria - 3960; Metazoa - 799; Fungi - 488; Plants - 2224; Viruses - 0; Other Eukaryotes - 609 (source: NCBI BLink). & (gnl|cdd|36451 : 568.0) no description available & (gnl|cdd|85071 : 301.0) no description available & (reliability: 1594.0) & (original description: Putative ptr1, Description = Peptide transporter, PFAM = PF00854)' T '34.3' 'transport.amino acids' 'niben101scf02738_567833-573016' '(at3g30390 : 602.0) Encodes a putative amino acid transporter.; Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT5G38820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36519 : 296.0) no description available & (gnl|cdd|85489 : 151.0) no description available & (reliability: 1204.0) & (original description: Putative HvANT1, Description = Putative aromatic and neutral amino acid transporter, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf02805_133510-141420' '(at2g01170 : 510.0) Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.; bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36503 : 378.0) no description available & (gnl|cdd|30877 : 101.0) no description available & (reliability: 1020.0) & (original description: Putative BAT1, Description = Amino acid permease, PFAM = PF13520)' T '34.3' 'transport.amino acids' 'niben101scf03020_20327-28250' '(at1g47670 : 407.0) Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: LYS/HIS transporter 7 (TAIR:AT4G35180.1); Has 1570 Blast hits to 1567 proteins in 175 species: Archae - 0; Bacteria - 20; Metazoa - 174; Fungi - 154; Plants - 1118; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|36517 : 250.0) no description available & (gnl|cdd|85489 : 170.0) no description available & (reliability: 814.0) & (original description: Putative AATL1, Description = Lysine histidine transporter-like 8, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf03150_267978-277725' '(at1g25530 : 638.0) Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: lysine histidine transporter 1 (TAIR:AT5G40780.1); Has 3229 Blast hits to 3219 proteins in 255 species: Archae - 4; Bacteria - 28; Metazoa - 882; Fungi - 529; Plants - 1538; Viruses - 0; Other Eukaryotes - 248 (source: NCBI BLink). & (gnl|cdd|36517 : 396.0) no description available & (gnl|cdd|85489 : 322.0) no description available & (reliability: 1276.0) & (original description: Putative At1g25530, Description = Lysine histidine transporter-like 6, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf03227_592390-602868' '(at1g58030 : 653.0) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Localized to the tonoplast.; cationic amino acid transporter 2 (CAT2); FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport, transport, transmembrane transport; LOCATED IN: plant-type vacuole membrane, plasma membrane, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 3 (TAIR:AT5G36940.1); Has 37076 Blast hits to 34712 proteins in 2307 species: Archae - 552; Bacteria - 29543; Metazoa - 2357; Fungi - 2838; Plants - 508; Viruses - 0; Other Eukaryotes - 1278 (source: NCBI BLink). & (gnl|cdd|36500 : 332.0) no description available & (gnl|cdd|30877 : 174.0) no description available & (reliability: 1306.0) & (original description: Putative HvCAT6, Description = Putative cationic amino acid transporter, PFAM = PF13906;PF13520)' T '34.3' 'transport.amino acids' 'niben101scf03231_94586-99821' '(at1g47670 : 524.0) Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: LYS/HIS transporter 7 (TAIR:AT4G35180.1); Has 1570 Blast hits to 1567 proteins in 175 species: Archae - 0; Bacteria - 20; Metazoa - 174; Fungi - 154; Plants - 1118; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|36517 : 264.0) no description available & (gnl|cdd|85489 : 188.0) no description available & (reliability: 1048.0) & (original description: Putative At4g35180, Description = Lysine histidine transporter-like 7, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf03376_182503-185795' '(at2g42005 : 463.0) Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT4G38250.1); Has 4790 Blast hits to 4701 proteins in 275 species: Archae - 16; Bacteria - 37; Metazoa - 1783; Fungi - 807; Plants - 1311; Viruses - 6; Other Eukaryotes - 830 (source: NCBI BLink). & (gnl|cdd|36518 : 291.0) no description available & (gnl|cdd|85489 : 184.0) no description available & (reliability: 926.0) & (original description: Putative At2g42005, Description = Transmembrane amino acid transporter family protein, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf03414_239097-246919' '(at2g02040 : 915.0) Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. Expression of the transcripts for this gene can be detected in the embryo through in situ hybridization. This protein does not have nitrate transporter activity based on oocyte transport assays.; peptide transporter 2 (PTR2); FUNCTIONS IN: dipeptide transporter activity, high affinity oligopeptide transporter activity, tripeptide transporter activity, peptide transporter activity, transporter activity; INVOLVED IN: dipeptide transport, tripeptide transport, peptide transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G62200.1); Has 8080 Blast hits to 7668 proteins in 1494 species: Archae - 0; Bacteria - 3960; Metazoa - 799; Fungi - 488; Plants - 2224; Viruses - 0; Other Eukaryotes - 609 (source: NCBI BLink). & (gnl|cdd|36451 : 648.0) no description available & (gnl|cdd|85071 : 306.0) no description available & (reliability: 1830.0) & (original description: Putative ptr1, Description = Peptide transporter, PFAM = PF00854)' T '34.3' 'transport.amino acids' 'niben101scf03600_403453-409510' '(at5g40780 : 671.0) Encodes LHT1 (lysine histidine transporter), a high-affinity transporter for cellular amino acid uptake in both root epidermis and leaf mesophyll.; lysine histidine transporter 1; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport, response to karrikin, amino acid import; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT1G48640.1); Has 4130 Blast hits to 4123 proteins in 343 species: Archae - 7; Bacteria - 195; Metazoa - 1180; Fungi - 628; Plants - 1642; Viruses - 0; Other Eukaryotes - 478 (source: NCBI BLink). & (gnl|cdd|36517 : 407.0) no description available & (gnl|cdd|85489 : 344.0) no description available & (reliability: 1342.0) & (original description: Putative LHT1, Description = Lysine histidine transporter 1, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf03673_196752-200029' '(at2g42005 : 488.0) Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT4G38250.1); Has 4790 Blast hits to 4701 proteins in 275 species: Archae - 16; Bacteria - 37; Metazoa - 1783; Fungi - 807; Plants - 1311; Viruses - 6; Other Eukaryotes - 830 (source: NCBI BLink). & (gnl|cdd|36518 : 322.0) no description available & (gnl|cdd|85489 : 200.0) no description available & (reliability: 976.0) & (original description: Putative At2g42005, Description = Amino acid transporter ANTL1, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf03985_397262-406033' '(at5g41800 : 659.0) Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT1G08230.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36517 : 269.0) no description available & (gnl|cdd|85489 : 181.0) no description available & (reliability: 1318.0) & (original description: Putative At5g41800, Description = Probable GABA transporter 2, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf04049_112417-119843' '(at1g47670 : 820.0) Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: LYS/HIS transporter 7 (TAIR:AT4G35180.1); Has 1570 Blast hits to 1567 proteins in 175 species: Archae - 0; Bacteria - 20; Metazoa - 174; Fungi - 154; Plants - 1118; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|36517 : 300.0) no description available & (gnl|cdd|85489 : 179.0) no description available & (reliability: 1640.0) & (original description: Putative AATL1, Description = Lysine histidine transporter-like 8, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf04198_273241-287617' '(at2g41190 : 600.0) Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT2G39130.1); Has 4993 Blast hits to 4959 proteins in 300 species: Archae - 18; Bacteria - 67; Metazoa - 1755; Fungi - 792; Plants - 1459; Viruses - 9; Other Eukaryotes - 893 (source: NCBI BLink). & (gnl|cdd|36517 : 285.0) no description available & (gnl|cdd|85489 : 183.0) no description available & (reliability: 1200.0) & (original description: Putative HvANT5, Description = Putative aromatic and neutral amino acid transporter, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf04223_134406-141974' '(q8l883|lax5_medtr : 847.0) Auxin transporter-like protein 5 (AUX1-like protein 5) (MtLAX5) - Medicago truncatula (Barrel medic) & (at2g21050 : 842.0) Encodes LAX2 (LIKE AUXIN RESISTANT), a member of the AUX1 LAX family of auxin influx carriers. Required for the establishment of embryonic root cell organization.; like AUXIN RESISTANT 2 (LAX2); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUX1 3 (TAIR:AT1G77690.1); Has 1017 Blast hits to 1012 proteins in 134 species: Archae - 0; Bacteria - 2; Metazoa - 94; Fungi - 224; Plants - 668; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|36517 : 297.0) no description available & (gnl|cdd|85489 : 208.0) no description available & (reliability: 1684.0) & (original description: Putative LAX5, Description = Auxin transporter-like protein 5, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf04506_384082-390722' '(at5g40780 : 573.0) Encodes LHT1 (lysine histidine transporter), a high-affinity transporter for cellular amino acid uptake in both root epidermis and leaf mesophyll.; lysine histidine transporter 1; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport, response to karrikin, amino acid import; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT1G48640.1); Has 4130 Blast hits to 4123 proteins in 343 species: Archae - 7; Bacteria - 195; Metazoa - 1180; Fungi - 628; Plants - 1642; Viruses - 0; Other Eukaryotes - 478 (source: NCBI BLink). & (gnl|cdd|36517 : 387.0) no description available & (gnl|cdd|85489 : 305.0) no description available & (reliability: 1146.0) & (original description: Putative LHT, Description = Transmembrane amino acid transporter family protein, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf04506_386365-389165' '(at5g40780 : 377.0) Encodes LHT1 (lysine histidine transporter), a high-affinity transporter for cellular amino acid uptake in both root epidermis and leaf mesophyll.; lysine histidine transporter 1; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport, response to karrikin, amino acid import; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT1G48640.1); Has 4130 Blast hits to 4123 proteins in 343 species: Archae - 7; Bacteria - 195; Metazoa - 1180; Fungi - 628; Plants - 1642; Viruses - 0; Other Eukaryotes - 478 (source: NCBI BLink). & (gnl|cdd|36517 : 230.0) no description available & (gnl|cdd|85489 : 195.0) no description available & (reliability: 754.0) & (original description: Putative LHT, Description = Transmembrane amino acid transporter family protein, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf04629_174679-180142' '(gnl|cdd|36451 : 548.0) no description available & (at5g01180 : 508.0) Encodes a dipeptide transporter expressed in pollen and ovules during early seed development. GFP-tagged PTR5 localizes to the plasma membrane.; peptide transporter 5 (PTR5); CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 1 (TAIR:AT3G54140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85071 : 249.0) no description available & (reliability: 996.0) & (original description: Putative ptr1, Description = Peptide transporter, PFAM = PF00854)' T '34.3' 'transport.amino acids' 'niben101scf04742_349000-359943' '(at5g19500 : 557.0) Tryptophan/tyrosine permease; CONTAINS InterPro DOMAIN/s: Tryptophan/tyrosine permease (InterPro:IPR018227); BEST Arabidopsis thaliana protein match is: Tryptophan/tyrosine permease (TAIR:AT2G33260.1); Has 3446 Blast hits to 3440 proteins in 699 species: Archae - 29; Bacteria - 3077; Metazoa - 10; Fungi - 2; Plants - 199; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|66867 : 204.0) no description available & (reliability: 1114.0) & (original description: Putative TYRP, Description = Tyrosine-specific transport protein, PFAM = PF03222)' T '34.3' 'transport.amino acids' 'niben101scf04907_444794-449705' '(gnl|cdd|66867 : 164.0) no description available & (at5g19500 : 117.0) Tryptophan/tyrosine permease; CONTAINS InterPro DOMAIN/s: Tryptophan/tyrosine permease (InterPro:IPR018227); BEST Arabidopsis thaliana protein match is: Tryptophan/tyrosine permease (TAIR:AT2G33260.1); Has 3446 Blast hits to 3440 proteins in 699 species: Archae - 29; Bacteria - 3077; Metazoa - 10; Fungi - 2; Plants - 199; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative TCM_043131, Description = Tryptophan/tyrosine permease, PFAM = PF03222)' T '34.3' 'transport.amino acids' 'niben101scf04907_445931-449640' '(gnl|cdd|66867 : 115.0) no description available & (at5g19500 : 102.0) Tryptophan/tyrosine permease; CONTAINS InterPro DOMAIN/s: Tryptophan/tyrosine permease (InterPro:IPR018227); BEST Arabidopsis thaliana protein match is: Tryptophan/tyrosine permease (TAIR:AT2G33260.1); Has 3446 Blast hits to 3440 proteins in 699 species: Archae - 29; Bacteria - 3077; Metazoa - 10; Fungi - 2; Plants - 199; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative PGSC0003DMG400024391, Description = Tryptophan/tyrosine permease, PFAM = PF03222)' T '34.3' 'transport.amino acids' 'niben101scf05017_227142-244790' '(at2g39890 : 530.0) Encodes a proline transporter with affinity for gly betaine, proline and GABA. Protein is expressed in the vascular tissue, specifically the phloem.; proline transporter 1 (PROT1); FUNCTIONS IN: amino acid transmembrane transporter activity, L-proline transmembrane transporter activity; INVOLVED IN: proline transport, amino acid transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: proline transporter 3 (TAIR:AT2G36590.1); Has 1473 Blast hits to 1467 proteins in 157 species: Archae - 0; Bacteria - 4; Metazoa - 93; Fungi - 146; Plants - 1200; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|36517 : 250.0) no description available & (gnl|cdd|85489 : 207.0) no description available & (reliability: 1060.0) & (original description: Putative Bet, Description = Betaine/proline transporter, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf05326_319403-326009' '(at2g39890 : 539.0) Encodes a proline transporter with affinity for gly betaine, proline and GABA. Protein is expressed in the vascular tissue, specifically the phloem.; proline transporter 1 (PROT1); FUNCTIONS IN: amino acid transmembrane transporter activity, L-proline transmembrane transporter activity; INVOLVED IN: proline transport, amino acid transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: proline transporter 3 (TAIR:AT2G36590.1); Has 1473 Blast hits to 1467 proteins in 157 species: Archae - 0; Bacteria - 4; Metazoa - 93; Fungi - 146; Plants - 1200; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|36517 : 264.0) no description available & (gnl|cdd|85489 : 220.0) no description available & (reliability: 1078.0) & (original description: Putative PROT1, Description = Proline transporter 1, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf05329_138701-143447' '(at3g56200 : 397.0) Encodes a putative amino acid transporter.; Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT2G40420.1); Has 4348 Blast hits to 4307 proteins in 431 species: Archae - 11; Bacteria - 411; Metazoa - 1511; Fungi - 660; Plants - 875; Viruses - 3; Other Eukaryotes - 877 (source: NCBI BLink). & (gnl|cdd|36519 : 245.0) no description available & (gnl|cdd|85489 : 128.0) no description available & (reliability: 794.0) & (original description: Putative HvANT1, Description = Putative aromatic and neutral amino acid transporter, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf05329_164619-168504' '(at3g56200 : 426.0) Encodes a putative amino acid transporter.; Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT2G40420.1); Has 4348 Blast hits to 4307 proteins in 431 species: Archae - 11; Bacteria - 411; Metazoa - 1511; Fungi - 660; Plants - 875; Viruses - 3; Other Eukaryotes - 877 (source: NCBI BLink). & (gnl|cdd|36519 : 243.0) no description available & (gnl|cdd|85489 : 133.0) no description available & (reliability: 852.0) & (original description: Putative BnaA09g35680D, Description = BnaA09g35680D protein, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf05750_103736-109710' '(at1g24400 : 590.0) High-affinity transporter for neutral and acidic amino acids, expressed in tapetum tissue of anthers; lysine histidine transporter 2 (LHT2); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT1G67640.1); Has 4292 Blast hits to 4283 proteins in 340 species: Archae - 11; Bacteria - 170; Metazoa - 1210; Fungi - 747; Plants - 1636; Viruses - 0; Other Eukaryotes - 518 (source: NCBI BLink). & (gnl|cdd|36517 : 391.0) no description available & (gnl|cdd|85489 : 316.0) no description available & (reliability: 1180.0) & (original description: Putative At1g71680, Description = Lysine histidine transporter-like 5, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf06158_79332-92245' '(gnl|cdd|36451 : 500.0) no description available & (at1g59740 : 406.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G33440.1); Has 6789 Blast hits to 6649 proteins in 1324 species: Archae - 0; Bacteria - 3372; Metazoa - 487; Fungi - 362; Plants - 2181; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink). & (gnl|cdd|85071 : 219.0) no description available & (reliability: 750.0) & (original description: Putative Sb03g034595, Description = Putative uncharacterized protein Sb03g034595, PFAM = PF00854)' T '34.3' 'transport.amino acids' 'niben101scf06767_15525-32266' '(at2g01170 : 648.0) Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.; bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36503 : 457.0) no description available & (gnl|cdd|30877 : 100.0) no description available & (reliability: 1296.0) & (original description: Putative BAT1, Description = Amino-acid permease BAT1, PFAM = PF13520)' T '34.3' 'transport.amino acids' 'niben101scf06973_14535-27707' '(at5g15240 : 425.0) Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT3G28960.1); Has 3693 Blast hits to 2957 proteins in 241 species: Archae - 0; Bacteria - 44; Metazoa - 1493; Fungi - 511; Plants - 1240; Viruses - 0; Other Eukaryotes - 405 (source: NCBI BLink). & (gnl|cdd|36517 : 253.0) no description available & (gnl|cdd|85489 : 166.0) no description available & (reliability: 850.0) & (original description: Putative Bh4, Description = Black hull 4, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf07191_65646-72781' '(q9fel7|lax2_medtr : 761.0) Auxin transporter-like protein 2 (AUX1-like protein 2) (MtLAX2) - Medicago truncatula (Barrel medic) & (at2g38120 : 746.0) Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning.; AUXIN RESISTANT 1 (AUX1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUXIN RESISTANT 1 (TAIR:AT5G01240.1); Has 1256 Blast hits to 1251 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 283; Plants - 825; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|36517 : 296.0) no description available & (gnl|cdd|85489 : 211.0) no description available & (reliability: 1480.0) & (original description: Putative LAX2, Description = Auxin transporter-like protein 2, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf07226_780982-788276' '(at1g31830 : 679.0) Amino acid permease family protein; FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: Amino acid permease family protein (TAIR:AT1G31820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36501 : 347.0) no description available & (gnl|cdd|30877 : 127.0) no description available & (reliability: 1358.0) & (original description: Putative aoc4, Description = Neutral amino acid transporter, PFAM = PF13520)' T '34.3' 'transport.amino acids' 'niben101scf07320_61518-69472' '(at3g55740 : 509.0) Encodes a proline transporter with affinity for gly betaine, proline, and GABA. Protein is expressed most highly in the roots.; proline transporter 2 (PROT2); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: proline transporter 1 (TAIR:AT2G39890.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36517 : 250.0) no description available & (gnl|cdd|85489 : 217.0) no description available & (reliability: 1018.0) & (original description: Putative PROT2, Description = Proline transporter 2, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf07655_257866-266203' '(at4g21120 : 622.0) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system.; amino acid transporter 1 (AAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, cationic amino acid transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: basic amino acid transport, L-arginine import, L-glutamate import; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Cationic amino acid transport permease (InterPro:IPR004755), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 5 (TAIR:AT2G34960.1); Has 31468 Blast hits to 31317 proteins in 2259 species: Archae - 510; Bacteria - 25893; Metazoa - 1955; Fungi - 1722; Plants - 342; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink). & (gnl|cdd|36500 : 326.0) no description available & (gnl|cdd|30877 : 166.0) no description available & (reliability: 1244.0) & (original description: Putative CAT1, Description = Cationic amino acid transporter 1, PFAM = PF13520;PF13906)' T '34.3' 'transport.amino acids' 'niben101scf08755_246136-249908' '(at2g34960 : 804.0) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. Localized to the plasma membrane.; cationic amino acid transporter 5 (CAT5); CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 8 (TAIR:AT1G17120.1); Has 31271 Blast hits to 31152 proteins in 2294 species: Archae - 542; Bacteria - 25908; Metazoa - 1864; Fungi - 1511; Plants - 392; Viruses - 1; Other Eukaryotes - 1053 (source: NCBI BLink). & (gnl|cdd|36500 : 327.0) no description available & (gnl|cdd|30877 : 146.0) no description available & (reliability: 1608.0) & (original description: Putative CAT5, Description = Cationic amino acid transporter 5, PFAM = PF13906;PF13520)' T '34.3' 'transport.amino acids' 'niben101scf08940_41046-46040' '(at5g40780 : 635.0) Encodes LHT1 (lysine histidine transporter), a high-affinity transporter for cellular amino acid uptake in both root epidermis and leaf mesophyll.; lysine histidine transporter 1; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport, response to karrikin, amino acid import; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT1G48640.1); Has 4130 Blast hits to 4123 proteins in 343 species: Archae - 7; Bacteria - 195; Metazoa - 1180; Fungi - 628; Plants - 1642; Viruses - 0; Other Eukaryotes - 478 (source: NCBI BLink). & (gnl|cdd|36517 : 395.0) no description available & (gnl|cdd|85489 : 327.0) no description available & (reliability: 1270.0) & (original description: Putative At1g61270, Description = Lysine histidine transporter-like 3, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf08940_112016-118554' '(at5g40780 : 651.0) Encodes LHT1 (lysine histidine transporter), a high-affinity transporter for cellular amino acid uptake in both root epidermis and leaf mesophyll.; lysine histidine transporter 1; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport, response to karrikin, amino acid import; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT1G48640.1); Has 4130 Blast hits to 4123 proteins in 343 species: Archae - 7; Bacteria - 195; Metazoa - 1180; Fungi - 628; Plants - 1642; Viruses - 0; Other Eukaryotes - 478 (source: NCBI BLink). & (gnl|cdd|36517 : 400.0) no description available & (gnl|cdd|85489 : 348.0) no description available & (reliability: 1302.0) & (original description: Putative LHT1, Description = Lysine histidine transporter 1, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf09115_7768-14251' '(at3g30390 : 600.0) Encodes a putative amino acid transporter.; Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT5G38820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36519 : 299.0) no description available & (gnl|cdd|85489 : 150.0) no description available & (reliability: 1200.0) & (original description: Putative HvANT1, Description = Putative aromatic and neutral amino acid transporter, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf09416_133333-155421' '(at1g08230 : 526.0) Transmembrane amino acid transporter family protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT5G41800.1); Has 2686 Blast hits to 2681 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 558; Fungi - 296; Plants - 1464; Viruses - 0; Other Eukaryotes - 368 (source: NCBI BLink). & (gnl|cdd|36517 : 278.0) no description available & (gnl|cdd|85489 : 188.0) no description available & (reliability: 1052.0) & (original description: Putative GAT1, Description = GABA transporter 1, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf09785_6141-10866' '(at3g28960 : 256.0) Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT5G15240.1); Has 4682 Blast hits to 4618 proteins in 292 species: Archae - 14; Bacteria - 67; Metazoa - 1733; Fungi - 899; Plants - 1284; Viruses - 8; Other Eukaryotes - 677 (source: NCBI BLink). & (gnl|cdd|36517 : 139.0) no description available & (gnl|cdd|85489 : 87.6) no description available & (reliability: 512.0) & (original description: Putative HvANT12, Description = Putative aromatic and neutral amino acid transporter, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf09785_7212-10676' '(at3g54830 : 132.0) Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT2G39130.1); Has 4642 Blast hits to 4638 proteins in 371 species: Archae - 12; Bacteria - 272; Metazoa - 1629; Fungi - 958; Plants - 1130; Viruses - 3; Other Eukaryotes - 638 (source: NCBI BLink). & (gnl|cdd|36517 : 89.2) no description available & (reliability: 264.0) & (original description: Putative Bh4, Description = Transmembrane amino acid transporter family protein, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf10866_61503-67749' '(at5g15240 : 422.0) Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT3G28960.1); Has 3693 Blast hits to 2957 proteins in 241 species: Archae - 0; Bacteria - 44; Metazoa - 1493; Fungi - 511; Plants - 1240; Viruses - 0; Other Eukaryotes - 405 (source: NCBI BLink). & (gnl|cdd|36517 : 255.0) no description available & (gnl|cdd|85489 : 162.0) no description available & (reliability: 844.0) & (original description: Putative Bh4, Description = Transmembrane amino acid transporter family protein, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf10902_15445-35597' '(at2g41190 : 578.0) Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT2G39130.1); Has 4993 Blast hits to 4959 proteins in 300 species: Archae - 18; Bacteria - 67; Metazoa - 1755; Fungi - 792; Plants - 1459; Viruses - 9; Other Eukaryotes - 893 (source: NCBI BLink). & (gnl|cdd|36517 : 274.0) no description available & (gnl|cdd|85489 : 182.0) no description available & (reliability: 1156.0) & (original description: Putative At5g02180, Description = Putative uncharacterized protein At5g02180/T7H20_230, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf11899_41383-47266' '(at5g49630 : 761.0) Is a high affinity amino acid transporter capable of transporting aspartate and tryptophan. May be involved in the amino acid uptake from xylem.; amino acid permease 6 (AAP6); FUNCTIONS IN: acidic amino acid transmembrane transporter activity, neutral amino acid transmembrane transporter activity, amino acid transmembrane transporter activity; INVOLVED IN: response to water deprivation, response to salt stress, aspartate transport, tryptophan transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 1 (TAIR:AT1G58360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36517 : 360.0) no description available & (gnl|cdd|85489 : 319.0) no description available & (reliability: 1522.0) & (original description: Putative AAP6, Description = Amino acid permease 6, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf12783_183307-191596' '(at3g30390 : 507.0) Encodes a putative amino acid transporter.; Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT5G38820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36519 : 277.0) no description available & (gnl|cdd|85489 : 149.0) no description available & (reliability: 1014.0) & (original description: Putative LOC100279609, Description = Amino acid-polyamine transporter, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf13254_46305-55399' '(at1g58030 : 843.0) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Localized to the tonoplast.; cationic amino acid transporter 2 (CAT2); FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport, transport, transmembrane transport; LOCATED IN: plant-type vacuole membrane, plasma membrane, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 3 (TAIR:AT5G36940.1); Has 37076 Blast hits to 34712 proteins in 2307 species: Archae - 552; Bacteria - 29543; Metazoa - 2357; Fungi - 2838; Plants - 508; Viruses - 0; Other Eukaryotes - 1278 (source: NCBI BLink). & (gnl|cdd|36500 : 324.0) no description available & (gnl|cdd|30877 : 178.0) no description available & (reliability: 1686.0) & (original description: Putative CAT2, Description = Cationic amino acid transporter 2, vacuolar, PFAM = PF13906;PF13520)' T '34.3' 'transport.amino acids' 'niben101scf13577_26295-28967' '(at5g49630 : 175.0) Is a high affinity amino acid transporter capable of transporting aspartate and tryptophan. May be involved in the amino acid uptake from xylem.; amino acid permease 6 (AAP6); FUNCTIONS IN: acidic amino acid transmembrane transporter activity, neutral amino acid transmembrane transporter activity, amino acid transmembrane transporter activity; INVOLVED IN: response to water deprivation, response to salt stress, aspartate transport, tryptophan transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 1 (TAIR:AT1G58360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36517 : 82.7) no description available & (reliability: 350.0) & (original description: Putative aap1, Description = Amino acid permease 6, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf18879_167784-189121' '(at5g49630 : 746.0) Is a high affinity amino acid transporter capable of transporting aspartate and tryptophan. May be involved in the amino acid uptake from xylem.; amino acid permease 6 (AAP6); FUNCTIONS IN: acidic amino acid transmembrane transporter activity, neutral amino acid transmembrane transporter activity, amino acid transmembrane transporter activity; INVOLVED IN: response to water deprivation, response to salt stress, aspartate transport, tryptophan transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 1 (TAIR:AT1G58360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36517 : 349.0) no description available & (gnl|cdd|85489 : 314.0) no description available & (reliability: 1492.0) & (original description: Putative AAP1, Description = Amino acid transporter, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf23427_19820-23528' '(at2g33260 : 468.0) Tryptophan/tyrosine permease; CONTAINS InterPro DOMAIN/s: Tryptophan/tyrosine permease (InterPro:IPR018227); BEST Arabidopsis thaliana protein match is: Tryptophan/tyrosine permease (TAIR:AT5G19500.1); Has 2832 Blast hits to 2825 proteins in 686 species: Archae - 20; Bacteria - 2600; Metazoa - 3; Fungi - 2; Plants - 103; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|66867 : 234.0) no description available & (reliability: 936.0) & (original description: Putative BnaC04g11250D, Description = BnaC04g11250D protein, PFAM = PF03222)' T '34.3' 'transport.amino acids' 'niben101scf24333_22761-26176' '(at1g80510 : 593.0) Encodes a close relative of the amino acid transporter ANT1 (AT3G11900).; Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT5G38820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36519 : 293.0) no description available & (gnl|cdd|85489 : 158.0) no description available & (reliability: 1186.0) & (original description: Putative AAT, Description = Putative amino acid transporter, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf33211_15874-22575' '(q9fel6|lax3_medtr : 775.0) Auxin transporter-like protein 3 (AUX1-like protein 3) (MtLAX3) - Medicago truncatula (Barrel medic) & (at1g77690 : 770.0) Encodes an auxin influx carrier LAX3 (Like Aux1) that promotes lateral root emergence. Auxin-induced expression of LAX3 in turn induces a selection of cell-wall-remodelling enzymes, which are likely to promote cell separation in advance of developing lateral root primordia.; like AUX1 3 (LAX3); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUXIN RESISTANT 2 (TAIR:AT2G21050.1); Has 1212 Blast hits to 1207 proteins in 154 species: Archae - 0; Bacteria - 0; Metazoa - 167; Fungi - 294; Plants - 716; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|36517 : 298.0) no description available & (gnl|cdd|85489 : 200.0) no description available & (reliability: 1456.0) & (original description: Putative LAX3, Description = Auxin transporter-like protein 3, PFAM = PF01490)' T '34.3' 'transport.amino acids' 'niben101scf33433_28168-36091' '(at2g39130 : 701.0) Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT3G54830.1); Has 5002 Blast hits to 4966 proteins in 291 species: Archae - 22; Bacteria - 61; Metazoa - 1689; Fungi - 998; Plants - 1489; Viruses - 3; Other Eukaryotes - 740 (source: NCBI BLink). & (gnl|cdd|36517 : 305.0) no description available & (gnl|cdd|85489 : 194.0) no description available & (reliability: 1402.0) & (original description: Putative HvANT5, Description = Putative aromatic and neutral amino acid transporter, PFAM = PF01490)' T '34.4' 'transport.nitrate' 'nbv0.3scaffold494_69301-73038' '(at5g60780 : 686.0) member of High affinity nitrate transporter family; nitrate transporter 2.3 (NRT2.3); FUNCTIONS IN: nitrate transmembrane transporter activity; INVOLVED IN: transmembrane transport; EXPRESSED IN: shoot apex, leaf; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: high affinity nitrate transporter 2.6 (TAIR:AT3G45060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32405 : 136.0) no description available & (gnl|cdd|37744 : 82.3) no description available & (reliability: 1372.0) & (original description: Putative nar3, Description = Nitrate transporter, PFAM = PF07690)' T '34.4' 'transport.nitrate' 'nbv0.3scaffold13470_22040-26137' '(at3g45060 : 710.0) member of High affinity nitrate transporter family; high affinity nitrate transporter 2.6 (NRT2.6); FUNCTIONS IN: nitrate transmembrane transporter activity; INVOLVED IN: response to karrikin; LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: sepal, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 2.3 (TAIR:AT5G60780.1); Has 6705 Blast hits to 6593 proteins in 1499 species: Archae - 65; Bacteria - 5860; Metazoa - 18; Fungi - 311; Plants - 270; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|32405 : 160.0) no description available & (gnl|cdd|37744 : 89.6) no description available & (reliability: 1420.0) & (original description: Putative nar3, Description = Nitrate transporter, PFAM = PF07690)' T '34.4' 'transport.nitrate' 'nbv0.3scaffold123925_280-1950' '(at1g08090 : 201.0) High-affinity nitrate transporter. Up-regulated by nitrate. Functions as a repressor of lateral root initiation independently of nitrate uptake.; nitrate transporter 2:1 (NRT2:1); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 2.2 (TAIR:AT1G08100.1); Has 5150 Blast hits to 5022 proteins in 1376 species: Archae - 45; Bacteria - 4402; Metazoa - 22; Fungi - 274; Plants - 247; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative NRT2, Description = Putative nitrate transporter, PFAM = )' T '34.4' 'transport.nitrate' 'nbv0.3scaffold141440_1-1271' '(at5g60770 : 370.0) member of High affinity nitrate transporter family; nitrate transporter 2.4 (NRT2.4); FUNCTIONS IN: nitrate transmembrane transporter activity; INVOLVED IN: transmembrane transport; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 2:1 (TAIR:AT1G08090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32405 : 84.1) no description available & (reliability: 740.0) & (original description: Putative nrt2, Description = High affinity nitrate transporter protein, PFAM = )' T '34.4' 'transport.nitrate' 'nbv0.5scaffold73_1162935-1233556' '(at1g69850 : 248.0) Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots.; nitrate transporter 1:2 (NRT1:2); FUNCTIONS IN: transporter activity, calcium ion binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G27040.1); Has 5870 Blast hits to 5639 proteins in 1033 species: Archae - 0; Bacteria - 2327; Metazoa - 503; Fungi - 400; Plants - 2186; Viruses - 0; Other Eukaryotes - 454 (source: NCBI BLink). & (gnl|cdd|36451 : 196.0) no description available & (gnl|cdd|85071 : 124.0) no description available & (reliability: 496.0) & (original description: Putative AIT1, Description = Nitrate transporter 1.2, PFAM = PF00854)' T '34.4' 'transport.nitrate' 'nbv0.5scaffold412_525324-531949' '(at1g08090 : 795.0) High-affinity nitrate transporter. Up-regulated by nitrate. Functions as a repressor of lateral root initiation independently of nitrate uptake.; nitrate transporter 2:1 (NRT2:1); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 2.2 (TAIR:AT1G08100.1); Has 5150 Blast hits to 5022 proteins in 1376 species: Archae - 45; Bacteria - 4402; Metazoa - 22; Fungi - 274; Plants - 247; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|32405 : 148.0) no description available & (gnl|cdd|37744 : 82.3) no description available & (reliability: 1590.0) & (original description: Putative nar3, Description = Nitrate transporter, PFAM = PF07690)' T '34.4' 'transport.nitrate' 'niben044scf00027872ctg002_7998-13173' '(at1g69850 : 541.0) Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots.; nitrate transporter 1:2 (NRT1:2); FUNCTIONS IN: transporter activity, calcium ion binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G27040.1); Has 5870 Blast hits to 5639 proteins in 1033 species: Archae - 0; Bacteria - 2327; Metazoa - 503; Fungi - 400; Plants - 2186; Viruses - 0; Other Eukaryotes - 454 (source: NCBI BLink). & (gnl|cdd|36451 : 396.0) no description available & (gnl|cdd|85071 : 198.0) no description available & (reliability: 1082.0) & (original description: Putative AIT1, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.4' 'transport.nitrate' 'niben044scf00053197ctg002_12791-19141' '(gnl|cdd|36451 : 461.0) no description available & (at1g27040 : 399.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1:2 (TAIR:AT1G69850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85071 : 195.0) no description available & (reliability: 798.0) & (original description: Putative AIT1, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.4' 'transport.nitrate' 'niben044scf00053197ctg002_12803-19223' '(gnl|cdd|36451 : 459.0) no description available & (at1g69850 : 398.0) Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots.; nitrate transporter 1:2 (NRT1:2); FUNCTIONS IN: transporter activity, calcium ion binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G27040.1); Has 5870 Blast hits to 5639 proteins in 1033 species: Archae - 0; Bacteria - 2327; Metazoa - 503; Fungi - 400; Plants - 2186; Viruses - 0; Other Eukaryotes - 454 (source: NCBI BLink). & (gnl|cdd|85071 : 194.0) no description available & (reliability: 796.0) & (original description: Putative AIT1, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.4' 'transport.nitrate' 'niben044scf00057548ctg000_306-9090' '(at1g69850 : 737.0) Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots.; nitrate transporter 1:2 (NRT1:2); FUNCTIONS IN: transporter activity, calcium ion binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G27040.1); Has 5870 Blast hits to 5639 proteins in 1033 species: Archae - 0; Bacteria - 2327; Metazoa - 503; Fungi - 400; Plants - 2186; Viruses - 0; Other Eukaryotes - 454 (source: NCBI BLink). & (gnl|cdd|36451 : 505.0) no description available & (gnl|cdd|85071 : 227.0) no description available & (reliability: 1474.0) & (original description: Putative AIT1, Description = Nitrate transporter, putative, PFAM = PF00854)' T '34.4' 'transport.nitrate' 'niben101scf00988_567708-571544' '(at5g60780 : 709.0) member of High affinity nitrate transporter family; nitrate transporter 2.3 (NRT2.3); FUNCTIONS IN: nitrate transmembrane transporter activity; INVOLVED IN: transmembrane transport; EXPRESSED IN: shoot apex, leaf; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: high affinity nitrate transporter 2.6 (TAIR:AT3G45060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32405 : 147.0) no description available & (gnl|cdd|37744 : 89.2) no description available & (reliability: 1418.0) & (original description: Putative nar3, Description = Nitrate transporter, PFAM = PF07690)' T '34.4' 'transport.nitrate' 'niben101scf01037_69839-75002' '(at3g21670 : 667.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G26690.1); Has 7861 Blast hits to 7524 proteins in 1448 species: Archae - 0; Bacteria - 4058; Metazoa - 633; Fungi - 459; Plants - 2170; Viruses - 0; Other Eukaryotes - 541 (source: NCBI BLink). & (gnl|cdd|36451 : 544.0) no description available & (gnl|cdd|85071 : 215.0) no description available & (reliability: 1334.0) & (original description: Putative ptr1, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.4' 'transport.nitrate' 'niben101scf01301_179926-187502' '(at2g26690 : 701.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: response to jasmonic acid stimulus, response to wounding; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1.1 (TAIR:AT1G12110.1); Has 7265 Blast hits to 7134 proteins in 1412 species: Archae - 0; Bacteria - 3658; Metazoa - 494; Fungi - 438; Plants - 2171; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|36451 : 536.0) no description available & (gnl|cdd|85071 : 238.0) no description available & (reliability: 1402.0) & (original description: Putative ptr1, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.4' 'transport.nitrate' 'niben101scf01487_406064-431259' '(gnl|cdd|36451 : 499.0) no description available & (at1g27040 : 414.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1:2 (TAIR:AT1G69850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85071 : 195.0) no description available & (reliability: 828.0) & (original description: Putative AIT2, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.4' 'transport.nitrate' 'niben101scf01537_119772-122535' '(at1g69850 : 141.0) Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots.; nitrate transporter 1:2 (NRT1:2); FUNCTIONS IN: transporter activity, calcium ion binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G27040.1); Has 5870 Blast hits to 5639 proteins in 1033 species: Archae - 0; Bacteria - 2327; Metazoa - 503; Fungi - 400; Plants - 2186; Viruses - 0; Other Eukaryotes - 454 (source: NCBI BLink). & (gnl|cdd|36451 : 92.7) no description available & (reliability: 282.0) & (original description: Putative AIT1, Description = Nitrate transporter 1.2, PFAM = )' T '34.4' 'transport.nitrate' 'niben101scf01646_148439-155052' '(at1g12110 : 691.0) Encodes NRT1.1 (CHL1), a dual-affinity nitrate transporter. The protein is expressed in guard cells and function in stomatal opening. Mutants have less transpiration and are more tolerant to drought. Expressed in lateral roots. Involved in nitrate signaling which enables the plant root system to detect and exploit nitrate-rich soil patches. Comparing to the wild type, the mutant displays a strongly decreased lateral root proliferation phenotype in nitrate rich patches on growth medium.; nitrate transporter 1.1 (NRT1.1); FUNCTIONS IN: transporter activity, nitrate transmembrane transporter activity; INVOLVED IN: response to water deprivation, nitrate transport, response to nitrate; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G26690.1); Has 6820 Blast hits to 6682 proteins in 1271 species: Archae - 0; Bacteria - 3284; Metazoa - 500; Fungi - 374; Plants - 2207; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|36451 : 562.0) no description available & (gnl|cdd|85071 : 240.0) no description available & (reliability: 1382.0) & (original description: Putative ptr1, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.4' 'transport.nitrate' 'niben101scf01775_32026-38835' '(gnl|cdd|36451 : 465.0) no description available & (at1g69850 : 385.0) Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots.; nitrate transporter 1:2 (NRT1:2); FUNCTIONS IN: transporter activity, calcium ion binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G27040.1); Has 5870 Blast hits to 5639 proteins in 1033 species: Archae - 0; Bacteria - 2327; Metazoa - 503; Fungi - 400; Plants - 2186; Viruses - 0; Other Eukaryotes - 454 (source: NCBI BLink). & (gnl|cdd|85071 : 193.0) no description available & (reliability: 770.0) & (original description: Putative AIT2, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.4' 'transport.nitrate' 'niben101scf01911_1320349-1324200' '(at1g08090 : 795.0) High-affinity nitrate transporter. Up-regulated by nitrate. Functions as a repressor of lateral root initiation independently of nitrate uptake.; nitrate transporter 2:1 (NRT2:1); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 2.2 (TAIR:AT1G08100.1); Has 5150 Blast hits to 5022 proteins in 1376 species: Archae - 45; Bacteria - 4402; Metazoa - 22; Fungi - 274; Plants - 247; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|32405 : 147.0) no description available & (gnl|cdd|37744 : 83.0) no description available & (reliability: 1590.0) & (original description: Putative nar3, Description = Nitrate transporter, PFAM = PF07690)' T '34.4' 'transport.nitrate' 'niben101scf02210_1057576-1065060' '(at2g26690 : 715.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: response to jasmonic acid stimulus, response to wounding; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1.1 (TAIR:AT1G12110.1); Has 7265 Blast hits to 7134 proteins in 1412 species: Archae - 0; Bacteria - 3658; Metazoa - 494; Fungi - 438; Plants - 2171; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|36451 : 540.0) no description available & (gnl|cdd|85071 : 240.0) no description available & (reliability: 1430.0) & (original description: Putative ptr1, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.4' 'transport.nitrate' 'niben101scf02486_440037-445671' '(gnl|cdd|36451 : 446.0) no description available & (at1g59740 : 404.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G33440.1); Has 6789 Blast hits to 6649 proteins in 1324 species: Archae - 0; Bacteria - 3372; Metazoa - 487; Fungi - 362; Plants - 2181; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink). & (gnl|cdd|85071 : 168.0) no description available & (reliability: 770.0) & (original description: Putative AIT1, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.4' 'transport.nitrate' 'niben101scf02486_440129-445713' '(gnl|cdd|36451 : 449.0) no description available & (at1g59740 : 405.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G33440.1); Has 6789 Blast hits to 6649 proteins in 1324 species: Archae - 0; Bacteria - 3372; Metazoa - 487; Fungi - 362; Plants - 2181; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink). & (gnl|cdd|85071 : 170.0) no description available & (reliability: 770.0) & (original description: Putative Sb03g034595, Description = Putative uncharacterized protein Sb03g034595, PFAM = PF00854)' T '34.4' 'transport.nitrate' 'niben101scf03271_54121-58875' '(at2g26690 : 786.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: response to jasmonic acid stimulus, response to wounding; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1.1 (TAIR:AT1G12110.1); Has 7265 Blast hits to 7134 proteins in 1412 species: Archae - 0; Bacteria - 3658; Metazoa - 494; Fungi - 438; Plants - 2171; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (gnl|cdd|36451 : 551.0) no description available & (gnl|cdd|85071 : 234.0) no description available & (reliability: 1572.0) & (original description: Putative ptr1, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.4' 'transport.nitrate' 'niben101scf03352_96107-101346' '(at1g12110 : 743.0) Encodes NRT1.1 (CHL1), a dual-affinity nitrate transporter. The protein is expressed in guard cells and function in stomatal opening. Mutants have less transpiration and are more tolerant to drought. Expressed in lateral roots. Involved in nitrate signaling which enables the plant root system to detect and exploit nitrate-rich soil patches. Comparing to the wild type, the mutant displays a strongly decreased lateral root proliferation phenotype in nitrate rich patches on growth medium.; nitrate transporter 1.1 (NRT1.1); FUNCTIONS IN: transporter activity, nitrate transmembrane transporter activity; INVOLVED IN: response to water deprivation, nitrate transport, response to nitrate; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G26690.1); Has 6820 Blast hits to 6682 proteins in 1271 species: Archae - 0; Bacteria - 3284; Metazoa - 500; Fungi - 374; Plants - 2207; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|36451 : 560.0) no description available & (gnl|cdd|85071 : 255.0) no description available & (reliability: 1486.0) & (original description: Putative ptr1, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.4' 'transport.nitrate' 'niben101scf03374_244450-251145' '(at1g12110 : 745.0) Encodes NRT1.1 (CHL1), a dual-affinity nitrate transporter. The protein is expressed in guard cells and function in stomatal opening. Mutants have less transpiration and are more tolerant to drought. Expressed in lateral roots. Involved in nitrate signaling which enables the plant root system to detect and exploit nitrate-rich soil patches. Comparing to the wild type, the mutant displays a strongly decreased lateral root proliferation phenotype in nitrate rich patches on growth medium.; nitrate transporter 1.1 (NRT1.1); FUNCTIONS IN: transporter activity, nitrate transmembrane transporter activity; INVOLVED IN: response to water deprivation, nitrate transport, response to nitrate; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G26690.1); Has 6820 Blast hits to 6682 proteins in 1271 species: Archae - 0; Bacteria - 3284; Metazoa - 500; Fungi - 374; Plants - 2207; Viruses - 0; Other Eukaryotes - 455 (source: NCBI BLink). & (gnl|cdd|36451 : 569.0) no description available & (gnl|cdd|85071 : 245.0) no description available & (reliability: 1490.0) & (original description: Putative ptr1, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.4' 'transport.nitrate' 'niben101scf04407_231117-236354' '(at1g69850 : 656.0) Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots.; nitrate transporter 1:2 (NRT1:2); FUNCTIONS IN: transporter activity, calcium ion binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G27040.1); Has 5870 Blast hits to 5639 proteins in 1033 species: Archae - 0; Bacteria - 2327; Metazoa - 503; Fungi - 400; Plants - 2186; Viruses - 0; Other Eukaryotes - 454 (source: NCBI BLink). & (gnl|cdd|36451 : 511.0) no description available & (gnl|cdd|85071 : 231.0) no description available & (reliability: 1312.0) & (original description: Putative AIT1, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.4' 'transport.nitrate' 'niben101scf05437_417076-420878' '(at5g50200 : 163.0) Wound-responsive gene 3 (WR3). Encodes a high-affinity nitrate transporter. Up-regulated by nitrate. Involved in jasmonic acid-independent wound signal transduction.; WOUND-RESPONSIVE 3 (WR3); FUNCTIONS IN: nitrate transmembrane transporter activity; INVOLVED IN: nitrate transport, response to nitrate, response to wounding; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Transporter, high affinity nitrate, Nar2 (InterPro:IPR016605); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT4G24730.4); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative upa10, Description = Component of high affinity nitrate transporter, PFAM = PF16974)' T '34.4' 'transport.nitrate' 'niben101scf05437_442204-445177' '(at4g24730 : 164.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transporter, high affinity nitrate, Nar2 (InterPro:IPR016605); BEST Arabidopsis thaliana protein match is: nitrate transmembrane transporters (TAIR:AT5G50200.1). & (reliability: 322.0) & (original description: Putative upa10, Description = Component of high affinity nitrate transporter, PFAM = PF16974)' T '34.4' 'transport.nitrate' 'niben101scf05543_136917-141843' '(at1g69850 : 512.0) Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots.; nitrate transporter 1:2 (NRT1:2); FUNCTIONS IN: transporter activity, calcium ion binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G27040.1); Has 5870 Blast hits to 5639 proteins in 1033 species: Archae - 0; Bacteria - 2327; Metazoa - 503; Fungi - 400; Plants - 2186; Viruses - 0; Other Eukaryotes - 454 (source: NCBI BLink). & (gnl|cdd|36451 : 393.0) no description available & (gnl|cdd|85071 : 195.0) no description available & (reliability: 1024.0) & (original description: Putative AIT1, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.4' 'transport.nitrate' 'niben101scf06158_79332-92245' '(gnl|cdd|36451 : 500.0) no description available & (at1g59740 : 406.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G33440.1); Has 6789 Blast hits to 6649 proteins in 1324 species: Archae - 0; Bacteria - 3372; Metazoa - 487; Fungi - 362; Plants - 2181; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink). & (gnl|cdd|85071 : 219.0) no description available & (reliability: 800.0) & (original description: Putative Sb03g034595, Description = Putative uncharacterized protein Sb03g034595, PFAM = PF00854)' T '34.4' 'transport.nitrate' 'niben101scf07019_308682-314198' '(at5g14570 : 504.0) Encodes ATNRT2.7, a nitrate transporter that controls nitrate content in seeds. Expression is detected in reproductive organs and peaks in seeds. Localized to the vacuolar membrane.; high affinity nitrate transporter 2.7 (NRT2.7); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter2.5 (TAIR:AT1G12940.1); Has 7777 Blast hits to 7739 proteins in 1625 species: Archae - 132; Bacteria - 6743; Metazoa - 43; Fungi - 326; Plants - 261; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink). & (gnl|cdd|32405 : 160.0) no description available & (gnl|cdd|37744 : 80.3) no description available & (reliability: 1008.0) & (original description: Putative nar3, Description = Nitrate transporter, PFAM = PF07690)' T '34.4' 'transport.nitrate' 'niben101scf07423_682691-687259' '(at3g45060 : 686.0) member of High affinity nitrate transporter family; high affinity nitrate transporter 2.6 (NRT2.6); FUNCTIONS IN: nitrate transmembrane transporter activity; INVOLVED IN: response to karrikin; LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: sepal, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 2.3 (TAIR:AT5G60780.1); Has 6705 Blast hits to 6593 proteins in 1499 species: Archae - 65; Bacteria - 5860; Metazoa - 18; Fungi - 311; Plants - 270; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|32405 : 154.0) no description available & (gnl|cdd|37744 : 85.0) no description available & (reliability: 1372.0) & (original description: Putative nar3, Description = Nitrate transporter, PFAM = PF07690)' T '34.4' 'transport.nitrate' 'niben101scf08597_67730-72998' '(at3g21670 : 725.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G26690.1); Has 7861 Blast hits to 7524 proteins in 1448 species: Archae - 0; Bacteria - 4058; Metazoa - 633; Fungi - 459; Plants - 2170; Viruses - 0; Other Eukaryotes - 541 (source: NCBI BLink). & (gnl|cdd|36451 : 551.0) no description available & (gnl|cdd|85071 : 230.0) no description available & (reliability: 1450.0) & (original description: Putative ptr1, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.4' 'transport.nitrate' 'niben101scf10287_257965-263397' '(at3g21670 : 723.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G26690.1); Has 7861 Blast hits to 7524 proteins in 1448 species: Archae - 0; Bacteria - 4058; Metazoa - 633; Fungi - 459; Plants - 2170; Viruses - 0; Other Eukaryotes - 541 (source: NCBI BLink). & (gnl|cdd|36451 : 549.0) no description available & (gnl|cdd|85071 : 228.0) no description available & (reliability: 1446.0) & (original description: Putative ptr1, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.4' 'transport.nitrate' 'niben101scf10482_41649-51403' '(at1g69850 : 742.0) Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots.; nitrate transporter 1:2 (NRT1:2); FUNCTIONS IN: transporter activity, calcium ion binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G27040.1); Has 5870 Blast hits to 5639 proteins in 1033 species: Archae - 0; Bacteria - 2327; Metazoa - 503; Fungi - 400; Plants - 2186; Viruses - 0; Other Eukaryotes - 454 (source: NCBI BLink). & (gnl|cdd|36451 : 499.0) no description available & (gnl|cdd|85071 : 233.0) no description available & (reliability: 1484.0) & (original description: Putative AIT1, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.4' 'transport.nitrate' 'niben101scf11557_95666-106507' '(at1g08090 : 699.0) High-affinity nitrate transporter. Up-regulated by nitrate. Functions as a repressor of lateral root initiation independently of nitrate uptake.; nitrate transporter 2:1 (NRT2:1); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 2.2 (TAIR:AT1G08100.1); Has 5150 Blast hits to 5022 proteins in 1376 species: Archae - 45; Bacteria - 4402; Metazoa - 22; Fungi - 274; Plants - 247; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (gnl|cdd|32405 : 159.0) no description available & (gnl|cdd|37744 : 82.6) no description available & (reliability: 1398.0) & (original description: Putative nar3, Description = Nitrate transporter, PFAM = PF07690)' T '34.4' 'transport.nitrate' 'niben101scf12671_60079-65609' '(at1g12940 : 670.0) member of High affinity nitrate transporter family; nitrate transporter2.5 (NRT2.5); FUNCTIONS IN: nitrate transmembrane transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: stem, inflorescence meristem; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 2:1 (TAIR:AT1G08090.1); Has 4805 Blast hits to 4611 proteins in 1220 species: Archae - 64; Bacteria - 3952; Metazoa - 78; Fungi - 287; Plants - 251; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (gnl|cdd|32405 : 171.0) no description available & (reliability: 1340.0) & (original description: Putative nar3, Description = Nitrate transporter, PFAM = PF07690)' T '34.4' 'transport.nitrate' 'niben101scf14136_26268-40070' '(at1g69850 : 740.0) Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots.; nitrate transporter 1:2 (NRT1:2); FUNCTIONS IN: transporter activity, calcium ion binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G27040.1); Has 5870 Blast hits to 5639 proteins in 1033 species: Archae - 0; Bacteria - 2327; Metazoa - 503; Fungi - 400; Plants - 2186; Viruses - 0; Other Eukaryotes - 454 (source: NCBI BLink). & (gnl|cdd|36451 : 495.0) no description available & (gnl|cdd|85071 : 234.0) no description available & (reliability: 1480.0) & (original description: Putative AIT1, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.4' 'transport.nitrate' 'niben101scf14805_348673-362071' '(at1g69850 : 714.0) Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots.; nitrate transporter 1:2 (NRT1:2); FUNCTIONS IN: transporter activity, calcium ion binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G27040.1); Has 5870 Blast hits to 5639 proteins in 1033 species: Archae - 0; Bacteria - 2327; Metazoa - 503; Fungi - 400; Plants - 2186; Viruses - 0; Other Eukaryotes - 454 (source: NCBI BLink). & (gnl|cdd|36451 : 502.0) no description available & (gnl|cdd|85071 : 233.0) no description available & (reliability: 1428.0) & (original description: Putative Sb10g022800, Description = Putative uncharacterized protein Sb10g022800, PFAM = PF00854)' T '34.4' 'transport.nitrate' 'niben101scf17540_88268-100386' '(at1g69850 : 744.0) Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots.; nitrate transporter 1:2 (NRT1:2); FUNCTIONS IN: transporter activity, calcium ion binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G27040.1); Has 5870 Blast hits to 5639 proteins in 1033 species: Archae - 0; Bacteria - 2327; Metazoa - 503; Fungi - 400; Plants - 2186; Viruses - 0; Other Eukaryotes - 454 (source: NCBI BLink). & (gnl|cdd|36451 : 498.0) no description available & (gnl|cdd|85071 : 230.0) no description available & (reliability: 1488.0) & (original description: Putative AIT1, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.5' 'transport.ammonium' 'nbv0.3scaffold43420_7999-12447' '(at1g64780 : 636.0) encodes an ammonium transporter protein believed to act as a high affinity transporter. It is expressed in the root, primarily in endodermal and cortical cells, and contributes to ammonium uptake in the root.; ammonium transporter 1;2 (AMT1;2); CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;1 (TAIR:AT4G13510.1); Has 11676 Blast hits to 11662 proteins in 2073 species: Archae - 224; Bacteria - 4692; Metazoa - 520; Fungi - 427; Plants - 507; Viruses - 0; Other Eukaryotes - 5306 (source: NCBI BLink). & (gnl|cdd|35901 : 517.0) no description available & (gnl|cdd|85113 : 364.0) no description available & (reliability: 1272.0) & (original description: Putative amt1, Description = Ammonium transporter, PFAM = PF00909)' T '34.5' 'transport.ammonium' 'nbv0.5scaffold309_172525-175979' '(at4g13510 : 692.0) Encodes a plasma membrane localized ammonium transporter. Contains a cytosolic trans-activation domain essential for ammonium uptake.; ammonium transporter 1;1 (AMT1;1); FUNCTIONS IN: ammonium transmembrane transporter activity; INVOLVED IN: ammonium transport, transport, protein polymerization, response to karrikin; LOCATED IN: nucleus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;3 (TAIR:AT3G24300.1); Has 11619 Blast hits to 11599 proteins in 2072 species: Archae - 224; Bacteria - 4688; Metazoa - 462; Fungi - 431; Plants - 505; Viruses - 0; Other Eukaryotes - 5309 (source: NCBI BLink). & (gnl|cdd|35901 : 510.0) no description available & (gnl|cdd|85113 : 355.0) no description available & (reliability: 1384.0) & (original description: Putative amt1, Description = Ammonium transporter, PFAM = PF00909)' T '34.5' 'transport.ammonium' 'niben044scf00001435ctg001_10709-14101' '(at4g13510 : 524.0) Encodes a plasma membrane localized ammonium transporter. Contains a cytosolic trans-activation domain essential for ammonium uptake.; ammonium transporter 1;1 (AMT1;1); FUNCTIONS IN: ammonium transmembrane transporter activity; INVOLVED IN: ammonium transport, transport, protein polymerization, response to karrikin; LOCATED IN: nucleus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;3 (TAIR:AT3G24300.1); Has 11619 Blast hits to 11599 proteins in 2072 species: Archae - 224; Bacteria - 4688; Metazoa - 462; Fungi - 431; Plants - 505; Viruses - 0; Other Eukaryotes - 5309 (source: NCBI BLink). & (gnl|cdd|35901 : 435.0) no description available & (gnl|cdd|85113 : 321.0) no description available & (reliability: 1048.0) & (original description: Putative amt1, Description = Ammonium transporter, PFAM = PF00909)' T '34.5' 'transport.ammonium' 'niben044scf00006531ctg010_77-4952' '(at2g38290 : 488.0) encodes a high-affinity ammonium transporter, which is expressed in shoot and root. Expression in root and shoot is under nitrogen and carbon dioxide regulation, respectively.; ammonium transporter 2 (AMT2); FUNCTIONS IN: ammonium transmembrane transporter activity, high affinity secondary active ammonium transmembrane transporter activity; INVOLVED IN: ammonium transport, response to nematode, cellular response to nitrogen starvation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Blood group Rhesus C/E/D polypeptide (InterPro:IPR002229), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;2 (TAIR:AT1G64780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35901 : 329.0) no description available & (gnl|cdd|30353 : 318.0) no description available & (reliability: 976.0) & (original description: Putative amt, Description = Ammonium transporter, PFAM = PF00909)' T '34.5' 'transport.ammonium' 'niben044scf00056501ctg001_2338-5804' '(at4g13510 : 712.0) Encodes a plasma membrane localized ammonium transporter. Contains a cytosolic trans-activation domain essential for ammonium uptake.; ammonium transporter 1;1 (AMT1;1); FUNCTIONS IN: ammonium transmembrane transporter activity; INVOLVED IN: ammonium transport, transport, protein polymerization, response to karrikin; LOCATED IN: nucleus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;3 (TAIR:AT3G24300.1); Has 11619 Blast hits to 11599 proteins in 2072 species: Archae - 224; Bacteria - 4688; Metazoa - 462; Fungi - 431; Plants - 505; Viruses - 0; Other Eukaryotes - 5309 (source: NCBI BLink). & (gnl|cdd|35901 : 511.0) no description available & (gnl|cdd|85113 : 353.0) no description available & (reliability: 1424.0) & (original description: Putative amt1, Description = Ammonium transporter, PFAM = PF00909)' T '34.5' 'transport.ammonium' 'niben101scf00594_26721-30112' '(at4g13510 : 539.0) Encodes a plasma membrane localized ammonium transporter. Contains a cytosolic trans-activation domain essential for ammonium uptake.; ammonium transporter 1;1 (AMT1;1); FUNCTIONS IN: ammonium transmembrane transporter activity; INVOLVED IN: ammonium transport, transport, protein polymerization, response to karrikin; LOCATED IN: nucleus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;3 (TAIR:AT3G24300.1); Has 11619 Blast hits to 11599 proteins in 2072 species: Archae - 224; Bacteria - 4688; Metazoa - 462; Fungi - 431; Plants - 505; Viruses - 0; Other Eukaryotes - 5309 (source: NCBI BLink). & (gnl|cdd|35901 : 448.0) no description available & (gnl|cdd|85113 : 329.0) no description available & (reliability: 1078.0) & (original description: Putative amt1, Description = Ammonium transporter, PFAM = PF00909)' T '34.5' 'transport.ammonium' 'niben101scf01696_687227-691895' '(at2g38290 : 472.0) encodes a high-affinity ammonium transporter, which is expressed in shoot and root. Expression in root and shoot is under nitrogen and carbon dioxide regulation, respectively.; ammonium transporter 2 (AMT2); FUNCTIONS IN: ammonium transmembrane transporter activity, high affinity secondary active ammonium transmembrane transporter activity; INVOLVED IN: ammonium transport, response to nematode, cellular response to nitrogen starvation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Blood group Rhesus C/E/D polypeptide (InterPro:IPR002229), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;2 (TAIR:AT1G64780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35901 : 336.0) no description available & (gnl|cdd|30353 : 327.0) no description available & (reliability: 944.0) & (original description: Putative amt, Description = Ammonium transporter, PFAM = PF00909)' T '34.5' 'transport.ammonium' 'niben101scf02358_437294-449448' '(at2g38290 : 540.0) encodes a high-affinity ammonium transporter, which is expressed in shoot and root. Expression in root and shoot is under nitrogen and carbon dioxide regulation, respectively.; ammonium transporter 2 (AMT2); FUNCTIONS IN: ammonium transmembrane transporter activity, high affinity secondary active ammonium transmembrane transporter activity; INVOLVED IN: ammonium transport, response to nematode, cellular response to nitrogen starvation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Blood group Rhesus C/E/D polypeptide (InterPro:IPR002229), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;2 (TAIR:AT1G64780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35901 : 338.0) no description available & (gnl|cdd|30353 : 298.0) no description available & (reliability: 1080.0) & (original description: Putative AMT, Description = Ammonium transporter, PFAM = PF00909)' T '34.5' 'transport.ammonium' 'niben101scf02944_191712-196590' '(at2g38290 : 468.0) encodes a high-affinity ammonium transporter, which is expressed in shoot and root. Expression in root and shoot is under nitrogen and carbon dioxide regulation, respectively.; ammonium transporter 2 (AMT2); FUNCTIONS IN: ammonium transmembrane transporter activity, high affinity secondary active ammonium transmembrane transporter activity; INVOLVED IN: ammonium transport, response to nematode, cellular response to nitrogen starvation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Blood group Rhesus C/E/D polypeptide (InterPro:IPR002229), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;2 (TAIR:AT1G64780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35901 : 363.0) no description available & (gnl|cdd|30353 : 330.0) no description available & (reliability: 936.0) & (original description: Putative AMT, Description = Ammonium transporter, PFAM = PF00909)' T '34.5' 'transport.ammonium' 'niben101scf05368_610880-616710' '(at2g38290 : 602.0) encodes a high-affinity ammonium transporter, which is expressed in shoot and root. Expression in root and shoot is under nitrogen and carbon dioxide regulation, respectively.; ammonium transporter 2 (AMT2); FUNCTIONS IN: ammonium transmembrane transporter activity, high affinity secondary active ammonium transmembrane transporter activity; INVOLVED IN: ammonium transport, response to nematode, cellular response to nitrogen starvation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Blood group Rhesus C/E/D polypeptide (InterPro:IPR002229), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;2 (TAIR:AT1G64780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35901 : 357.0) no description available & (gnl|cdd|30353 : 286.0) no description available & (reliability: 1204.0) & (original description: Putative amt, Description = Ammonium transporter, PFAM = PF00909)' T '34.5' 'transport.ammonium' 'niben101scf05619_166398-169867' '(at4g13510 : 696.0) Encodes a plasma membrane localized ammonium transporter. Contains a cytosolic trans-activation domain essential for ammonium uptake.; ammonium transporter 1;1 (AMT1;1); FUNCTIONS IN: ammonium transmembrane transporter activity; INVOLVED IN: ammonium transport, transport, protein polymerization, response to karrikin; LOCATED IN: nucleus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;3 (TAIR:AT3G24300.1); Has 11619 Blast hits to 11599 proteins in 2072 species: Archae - 224; Bacteria - 4688; Metazoa - 462; Fungi - 431; Plants - 505; Viruses - 0; Other Eukaryotes - 5309 (source: NCBI BLink). & (gnl|cdd|35901 : 510.0) no description available & (gnl|cdd|85113 : 356.0) no description available & (reliability: 1392.0) & (original description: Putative amt1, Description = Ammonium transporter, PFAM = PF00909)' T '34.5' 'transport.ammonium' 'niben101scf07539_9267-13835' '(at1g64780 : 672.0) encodes an ammonium transporter protein believed to act as a high affinity transporter. It is expressed in the root, primarily in endodermal and cortical cells, and contributes to ammonium uptake in the root.; ammonium transporter 1;2 (AMT1;2); CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;1 (TAIR:AT4G13510.1); Has 11676 Blast hits to 11662 proteins in 2073 species: Archae - 224; Bacteria - 4692; Metazoa - 520; Fungi - 427; Plants - 507; Viruses - 0; Other Eukaryotes - 5306 (source: NCBI BLink). & (gnl|cdd|35901 : 518.0) no description available & (gnl|cdd|85113 : 364.0) no description available & (reliability: 1344.0) & (original description: Putative amt1, Description = Ammonium transporter, PFAM = PF00909)' T '34.5' 'transport.ammonium' 'niben101scf07822_61857-69038' '(at1g72660 : 687.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; LOCATED IN: intracellular; EXPRESSED IN: root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), TGS (InterPro:IPR004095), GTP1/OBG (InterPro:IPR006073), GTP1/OBG, conserved site (InterPro:IPR006074), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: developmentally regulated G-protein 1 (TAIR:AT1G17470.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36699 : 630.0) no description available & (gnl|cdd|31357 : 498.0) no description available & (reliability: 1374.0) & (original description: Putative DRG1, Description = Developmentally-regulated G-protein 1, PFAM = PF16897;PF01926;PF02824)' T '34.5' 'transport.ammonium' 'niben101scf09782_42994-47924' '(at2g38290 : 508.0) encodes a high-affinity ammonium transporter, which is expressed in shoot and root. Expression in root and shoot is under nitrogen and carbon dioxide regulation, respectively.; ammonium transporter 2 (AMT2); FUNCTIONS IN: ammonium transmembrane transporter activity, high affinity secondary active ammonium transmembrane transporter activity; INVOLVED IN: ammonium transport, response to nematode, cellular response to nitrogen starvation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Blood group Rhesus C/E/D polypeptide (InterPro:IPR002229), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;2 (TAIR:AT1G64780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35901 : 326.0) no description available & (gnl|cdd|30353 : 309.0) no description available & (reliability: 1016.0) & (original description: Putative amt, Description = Ammonium transporter, PFAM = PF00909)' T '34.5' 'transport.ammonium' 'niben101scf16915_105794-110586' '(at2g38290 : 471.0) encodes a high-affinity ammonium transporter, which is expressed in shoot and root. Expression in root and shoot is under nitrogen and carbon dioxide regulation, respectively.; ammonium transporter 2 (AMT2); FUNCTIONS IN: ammonium transmembrane transporter activity, high affinity secondary active ammonium transmembrane transporter activity; INVOLVED IN: ammonium transport, response to nematode, cellular response to nitrogen starvation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Blood group Rhesus C/E/D polypeptide (InterPro:IPR002229), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;2 (TAIR:AT1G64780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35901 : 323.0) no description available & (gnl|cdd|30353 : 309.0) no description available & (reliability: 942.0) & (original description: Putative amt, Description = Ammonium transporter, PFAM = PF00909)' T '34.6' 'transport.sulphate' 'nbv0.3scaffold2901_31467-40681' '(at1g23090 : 893.0) Encodes AST91 mRNA for sulfate transporter.; sulfate transporter 91 (AST91); FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 3;4 (TAIR:AT3G15990.1); Has 10235 Blast hits to 10139 proteins in 1863 species: Archae - 39; Bacteria - 6188; Metazoa - 1155; Fungi - 478; Plants - 559; Viruses - 0; Other Eukaryotes - 1816 (source: NCBI BLink). & (gnl|cdd|35457 : 520.0) no description available & (q02920|no70_soybn : 370.0) Early nodulin 70 - Glycine max (Soybean) & (gnl|cdd|85118 : 299.0) no description available & (reliability: 1786.0) & (original description: Putative SULTR3, Description = Probable sulfate transporter 3.3, PFAM = PF00916;PF01740)' T '34.6' 'transport.sulphate' 'nbv0.3scaffold10313_11013-18819' '(at3g51895 : 901.0) Encodes a sulfate transporter.; sulfate transporter 3;1 (SULTR3;1); FUNCTIONS IN: secondary active sulfate transmembrane transporter activity, transporter activity, sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 3;2 (TAIR:AT4G02700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35457 : 516.0) no description available & (q02920|no70_soybn : 334.0) Early nodulin 70 - Glycine max (Soybean) & (gnl|cdd|85118 : 280.0) no description available & (reliability: 1802.0) & (original description: Putative SULTR3, Description = Sulfate transporter 3.1, PFAM = PF01740;PF00916)' T '34.6' 'transport.sulphate' 'nbv0.5scaffold36_997446-1004505' '(at1g23090 : 488.0) Encodes AST91 mRNA for sulfate transporter.; sulfate transporter 91 (AST91); FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 3;4 (TAIR:AT3G15990.1); Has 10235 Blast hits to 10139 proteins in 1863 species: Archae - 39; Bacteria - 6188; Metazoa - 1155; Fungi - 478; Plants - 559; Viruses - 0; Other Eukaryotes - 1816 (source: NCBI BLink). & (gnl|cdd|35457 : 257.0) no description available & (q02920|no70_soybn : 219.0) Early nodulin 70 - Glycine max (Soybean) & (gnl|cdd|31004 : 153.0) no description available & (reliability: 976.0) & (original description: Putative st1, Description = Putative sulfate transporter 3.3, PFAM = PF00916)' T '34.6' 'transport.sulphate' 'niben044scf00000680ctg004_1-11366' '(at3g51895 : 533.0) Encodes a sulfate transporter.; sulfate transporter 3;1 (SULTR3;1); FUNCTIONS IN: secondary active sulfate transmembrane transporter activity, transporter activity, sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 3;2 (TAIR:AT4G02700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35457 : 314.0) no description available & (gnl|cdd|85118 : 210.0) no description available & (q02920|no70_soybn : 162.0) Early nodulin 70 - Glycine max (Soybean) & (reliability: 1066.0) & (original description: Putative Os10g0420400, Description = Os10g0420400 protein, PFAM = PF01740;PF00916)' T '34.6' 'transport.sulphate' 'niben044scf00005980ctg041_1-3875' '(at5g10180 : 414.0) Encodes a low-affinity sulfate transporter expressed in the root cap and central cylinder, where it is induced by sulfur starvation. Expression in the shoot vascular system is not induced by sulfur starvation.; slufate transporter 2;1 (SULTR2;1); FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: STAS domain / Sulfate transporter family (TAIR:AT1G77990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35457 : 309.0) no description available & (q02920|no70_soybn : 281.0) Early nodulin 70 - Glycine max (Soybean) & (gnl|cdd|85118 : 190.0) no description available & (reliability: 828.0) & (original description: Putative C468, Description = Sulfate transporter-like protein, PFAM = PF00916)' T '34.6' 'transport.sulphate' 'niben044scf00020459ctg000_1219-9715' '(at1g23090 : 952.0) Encodes AST91 mRNA for sulfate transporter.; sulfate transporter 91 (AST91); FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 3;4 (TAIR:AT3G15990.1); Has 10235 Blast hits to 10139 proteins in 1863 species: Archae - 39; Bacteria - 6188; Metazoa - 1155; Fungi - 478; Plants - 559; Viruses - 0; Other Eukaryotes - 1816 (source: NCBI BLink). & (gnl|cdd|35457 : 526.0) no description available & (q02920|no70_soybn : 373.0) Early nodulin 70 - Glycine max (Soybean) & (gnl|cdd|31004 : 307.0) no description available & (reliability: 1904.0) & (original description: Putative SULTR3, Description = Probable sulfate transporter 3.3, PFAM = PF00916;PF01740)' T '34.6' 'transport.sulphate' 'niben101scf00104_449537-459731' '(at3g51895 : 877.0) Encodes a sulfate transporter.; sulfate transporter 3;1 (SULTR3;1); FUNCTIONS IN: secondary active sulfate transmembrane transporter activity, transporter activity, sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 3;2 (TAIR:AT4G02700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35457 : 566.0) no description available & (gnl|cdd|85118 : 319.0) no description available & (q02920|no70_soybn : 303.0) Early nodulin 70 - Glycine max (Soybean) & (reliability: 1754.0) & (original description: Putative SULTR3, Description = Sulfate transporter 3.1, PFAM = PF01740;PF00916)' T '34.6' 'transport.sulphate' 'niben101scf00936_295137-301503' '(at5g19600 : 767.0) Encodes sulfate transporter Sultr3;5.; sulfate transporter 3;5 (SULTR3;5); FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 3;1 (TAIR:AT3G51895.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35457 : 491.0) no description available & (q02920|no70_soybn : 351.0) Early nodulin 70 - Glycine max (Soybean) & (gnl|cdd|31004 : 304.0) no description available & (reliability: 1534.0) & (original description: Putative SULTR3, Description = Probable sulfate transporter 3.5, PFAM = PF00916;PF01740)' T '34.6' 'transport.sulphate' 'niben101scf00960_1124923-1132248' '(at5g10180 : 759.0) Encodes a low-affinity sulfate transporter expressed in the root cap and central cylinder, where it is induced by sulfur starvation. Expression in the shoot vascular system is not induced by sulfur starvation.; slufate transporter 2;1 (SULTR2;1); FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: STAS domain / Sulfate transporter family (TAIR:AT1G77990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35457 : 511.0) no description available & (q02920|no70_soybn : 448.0) Early nodulin 70 - Glycine max (Soybean) & (gnl|cdd|85118 : 330.0) no description available & (reliability: 1518.0) & (original description: Putative ST3, Description = Low affinity sulfate transporter 3, PFAM = PF00916;PF01740)' T '34.6' 'transport.sulphate' 'niben101scf00960_1486485-1492120' '(at1g22150 : 974.0) sulfate transporter Sultr1;3; sulfate transporter 1;3 (SULTR1;3); FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: petal, leaf whorl, sperm cell, flower, pollen tube; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 1;2 (TAIR:AT1G78000.2); Has 9966 Blast hits to 9871 proteins in 1873 species: Archae - 35; Bacteria - 6045; Metazoa - 1156; Fungi - 451; Plants - 559; Viruses - 0; Other Eukaryotes - 1720 (source: NCBI BLink). & (gnl|cdd|35457 : 594.0) no description available & (q02920|no70_soybn : 393.0) Early nodulin 70 - Glycine max (Soybean) & (gnl|cdd|85118 : 344.0) no description available & (reliability: 1948.0) & (original description: Putative SULTR1, Description = Sulfate transporter 1.3, PFAM = PF01740;PF00916)' T '34.6' 'transport.sulphate' 'niben101scf01870_34668-40093' '(at1g22150 : 947.0) sulfate transporter Sultr1;3; sulfate transporter 1;3 (SULTR1;3); FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: petal, leaf whorl, sperm cell, flower, pollen tube; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 1;2 (TAIR:AT1G78000.2); Has 9966 Blast hits to 9871 proteins in 1873 species: Archae - 35; Bacteria - 6045; Metazoa - 1156; Fungi - 451; Plants - 559; Viruses - 0; Other Eukaryotes - 1720 (source: NCBI BLink). & (gnl|cdd|35457 : 595.0) no description available & (q02920|no70_soybn : 367.0) Early nodulin 70 - Glycine max (Soybean) & (gnl|cdd|85118 : 345.0) no description available & (reliability: 1894.0) & (original description: Putative st1, Description = Sulfate transporter, putative, PFAM = PF01740;PF00916)' T '34.6' 'transport.sulphate' 'niben101scf01870_331418-338229' '(at5g10180 : 694.0) Encodes a low-affinity sulfate transporter expressed in the root cap and central cylinder, where it is induced by sulfur starvation. Expression in the shoot vascular system is not induced by sulfur starvation.; slufate transporter 2;1 (SULTR2;1); FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: STAS domain / Sulfate transporter family (TAIR:AT1G77990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35457 : 507.0) no description available & (q02920|no70_soybn : 391.0) Early nodulin 70 - Glycine max (Soybean) & (gnl|cdd|85118 : 321.0) no description available & (reliability: 1388.0) & (original description: Putative sultr 2, Description = Sulphate transporter, PFAM = PF01740;PF00916)' T '34.6' 'transport.sulphate' 'niben101scf01870_333206-335696' '(at1g77990 : 132.0) cDNA encoding a sulfate transporter.; AST56; FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: slufate transporter 2;1 (TAIR:AT5G10180.1); Has 9792 Blast hits to 9696 proteins in 1853 species: Archae - 35; Bacteria - 5971; Metazoa - 1157; Fungi - 422; Plants - 555; Viruses - 0; Other Eukaryotes - 1652 (source: NCBI BLink). & (gnl|cdd|85118 : 120.0) no description available & (gnl|cdd|35457 : 117.0) no description available & (q02920|no70_soybn : 109.0) Early nodulin 70 - Glycine max (Soybean) & (reliability: 264.0) & (original description: Putative sp1, Description = Sulfate transporter 2.1, PFAM = PF00916)' T '34.6' 'transport.sulphate' 'niben101scf02335_378150-383445' '(at1g22150 : 881.0) sulfate transporter Sultr1;3; sulfate transporter 1;3 (SULTR1;3); FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: petal, leaf whorl, sperm cell, flower, pollen tube; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 1;2 (TAIR:AT1G78000.2); Has 9966 Blast hits to 9871 proteins in 1873 species: Archae - 35; Bacteria - 6045; Metazoa - 1156; Fungi - 451; Plants - 559; Viruses - 0; Other Eukaryotes - 1720 (source: NCBI BLink). & (gnl|cdd|35457 : 583.0) no description available & (q02920|no70_soybn : 365.0) Early nodulin 70 - Glycine max (Soybean) & (gnl|cdd|85118 : 334.0) no description available & (reliability: 1762.0) & (original description: Putative SULTR1, Description = Sulfate transporter 1.3, PFAM = PF01740;PF00916)' T '34.6' 'transport.sulphate' 'niben101scf02618_274315-277595' '(at1g23090 : 287.0) Encodes AST91 mRNA for sulfate transporter.; sulfate transporter 91 (AST91); FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 3;4 (TAIR:AT3G15990.1); Has 10235 Blast hits to 10139 proteins in 1863 species: Archae - 39; Bacteria - 6188; Metazoa - 1155; Fungi - 478; Plants - 559; Viruses - 0; Other Eukaryotes - 1816 (source: NCBI BLink). & (gnl|cdd|85118 : 147.0) no description available & (gnl|cdd|35457 : 143.0) no description available & (q02920|no70_soybn : 138.0) Early nodulin 70 - Glycine max (Soybean) & (reliability: 574.0) & (original description: Putative 1, Description = Sulfate transporter, putative, PFAM = PF00916)' T '34.6' 'transport.sulphate' 'niben101scf02618_277596-279418' '(at1g23090 : 272.0) Encodes AST91 mRNA for sulfate transporter.; sulfate transporter 91 (AST91); FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 3;4 (TAIR:AT3G15990.1); Has 10235 Blast hits to 10139 proteins in 1863 species: Archae - 39; Bacteria - 6188; Metazoa - 1155; Fungi - 478; Plants - 559; Viruses - 0; Other Eukaryotes - 1816 (source: NCBI BLink). & (gnl|cdd|35457 : 166.0) no description available & (gnl|cdd|85118 : 121.0) no description available & (q02920|no70_soybn : 107.0) Early nodulin 70 - Glycine max (Soybean) & (reliability: 544.0) & (original description: Putative 1, Description = Putative sulfate transporter 3.3, PFAM = PF00916;PF01740)' T '34.6' 'transport.sulphate' 'niben101scf02829_417250-431645' '(at3g51895 : 976.0) Encodes a sulfate transporter.; sulfate transporter 3;1 (SULTR3;1); FUNCTIONS IN: secondary active sulfate transmembrane transporter activity, transporter activity, sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 3;2 (TAIR:AT4G02700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35457 : 574.0) no description available & (q02920|no70_soybn : 369.0) Early nodulin 70 - Glycine max (Soybean) & (gnl|cdd|85118 : 324.0) no description available & (reliability: 1952.0) & (original description: Putative SULTR3, Description = Sulfate transporter 3.1, PFAM = PF00916;PF01740)' T '34.6' 'transport.sulphate' 'niben101scf04331_348895-359167' '(at3g51895 : 954.0) Encodes a sulfate transporter.; sulfate transporter 3;1 (SULTR3;1); FUNCTIONS IN: secondary active sulfate transmembrane transporter activity, transporter activity, sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 3;2 (TAIR:AT4G02700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35457 : 551.0) no description available & (q02920|no70_soybn : 368.0) Early nodulin 70 - Glycine max (Soybean) & (gnl|cdd|85118 : 319.0) no description available & (reliability: 1908.0) & (original description: Putative Sultr3, Description = Putative sulfate transporter, PFAM = PF01740;PF00916)' T '34.6' 'transport.sulphate' 'niben101scf04456_290901-297582' '(at3g15990 : 904.0) Encodes sulfate transporter Sultr3;4.; sulfate transporter 3;4 (SULTR3;4); FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 91 (TAIR:AT1G23090.1); Has 9959 Blast hits to 9880 proteins in 1863 species: Archae - 39; Bacteria - 6009; Metazoa - 1155; Fungi - 419; Plants - 563; Viruses - 0; Other Eukaryotes - 1774 (source: NCBI BLink). & (gnl|cdd|35457 : 534.0) no description available & (q02920|no70_soybn : 336.0) Early nodulin 70 - Glycine max (Soybean) & (gnl|cdd|31004 : 313.0) no description available & (reliability: 1808.0) & (original description: Putative SULTR3, Description = Probable sulfate transporter 3.4, PFAM = PF01740;PF00916)' T '34.6' 'transport.sulphate' 'niben101scf05044_197525-203780' '(at3g15990 : 857.0) Encodes sulfate transporter Sultr3;4.; sulfate transporter 3;4 (SULTR3;4); FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 91 (TAIR:AT1G23090.1); Has 9959 Blast hits to 9880 proteins in 1863 species: Archae - 39; Bacteria - 6009; Metazoa - 1155; Fungi - 419; Plants - 563; Viruses - 0; Other Eukaryotes - 1774 (source: NCBI BLink). & (gnl|cdd|35457 : 520.0) no description available & (gnl|cdd|31004 : 309.0) no description available & (q02920|no70_soybn : 308.0) Early nodulin 70 - Glycine max (Soybean) & (reliability: 1714.0) & (original description: Putative st1, Description = Putative sulfate transporter 3.3, PFAM = PF00916;PF01740)' T '34.6' 'transport.sulphate' 'niben101scf06016_210289-220243' '(at5g10180 : 696.0) Encodes a low-affinity sulfate transporter expressed in the root cap and central cylinder, where it is induced by sulfur starvation. Expression in the shoot vascular system is not induced by sulfur starvation.; slufate transporter 2;1 (SULTR2;1); FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: STAS domain / Sulfate transporter family (TAIR:AT1G77990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35457 : 506.0) no description available & (q02920|no70_soybn : 398.0) Early nodulin 70 - Glycine max (Soybean) & (gnl|cdd|85118 : 310.0) no description available & (reliability: 1392.0) & (original description: Putative SULTR2, Description = Sulfate transporter 2.1, PFAM = PF00916;PF01740)' T '34.6' 'transport.sulphate' 'niben101scf08341_501653-510767' '(at5g19600 : 759.0) Encodes sulfate transporter Sultr3;5.; sulfate transporter 3;5 (SULTR3;5); FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 3;1 (TAIR:AT3G51895.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35457 : 504.0) no description available & (q02920|no70_soybn : 332.0) Early nodulin 70 - Glycine max (Soybean) & (gnl|cdd|31004 : 321.0) no description available & (reliability: 1518.0) & (original description: Putative SULTR3, Description = Probable sulfate transporter 3.5, PFAM = PF00916;PF01740)' T '34.6' 'transport.sulphate' 'niben101scf16098_59995-67293' '(at1g23090 : 950.0) Encodes AST91 mRNA for sulfate transporter.; sulfate transporter 91 (AST91); FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 3;4 (TAIR:AT3G15990.1); Has 10235 Blast hits to 10139 proteins in 1863 species: Archae - 39; Bacteria - 6188; Metazoa - 1155; Fungi - 478; Plants - 559; Viruses - 0; Other Eukaryotes - 1816 (source: NCBI BLink). & (gnl|cdd|35457 : 527.0) no description available & (q02920|no70_soybn : 376.0) Early nodulin 70 - Glycine max (Soybean) & (gnl|cdd|31004 : 308.0) no description available & (reliability: 1900.0) & (original description: Putative SULTR3, Description = Probable sulfate transporter 3.3, PFAM = PF00916;PF01740)' T '34.6' 'transport.sulphate' 'niben101scf30418_111005-124151' '(at3g12520 : 864.0) Encodes a sulfate transporter that in induced under sulfate limitation.; sulfate transporter 4;2 (SULTR4;2); FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 4.1 (TAIR:AT5G13550.1). & (gnl|cdd|35457 : 555.0) no description available & (gnl|cdd|31004 : 380.0) no description available & (q02920|no70_soybn : 203.0) Early nodulin 70 - Glycine max (Soybean) & (reliability: 1728.0) & (original description: Putative SULTR4, Description = Probable sulfate transporter 4.2, PFAM = PF00916;PF01740)' T '34.7' 'transport.phosphate' 'nbv0.3scaffold10179_32948-46313' '(at3g23430 : 934.0) mutant is deficient in the transfer of phosphate from root epidermal and cortical cells to the xylem. encodes protein with the mainly hydrophilic N-terminal and the C-terminal containing 6 potential membrane-spanning domains.; phosphate 1 (PHO1); INVOLVED IN: cellular response to phosphate starvation, phosphate transport; LOCATED IN: integral to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G68740.1); Has 1217 Blast hits to 1145 proteins in 207 species: Archae - 2; Bacteria - 0; Metazoa - 255; Fungi - 408; Plants - 406; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink). & (gnl|cdd|36377 : 507.0) no description available & (gnl|cdd|66777 : 165.0) no description available & (reliability: 1868.0) & (original description: Putative PHO1, Description = Phosphate transporter PHO1, PFAM = PF03105;PF03105;PF03124)' T '34.7' 'transport.phosphate' 'nbv0.3scaffold17884_27216-32832' '(at3g29060 : 850.0) EXS (ERD1/XPR1/SYG1) family protein; LOCATED IN: integral to membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G14040.1); Has 1349 Blast hits to 1241 proteins in 219 species: Archae - 2; Bacteria - 7; Metazoa - 407; Fungi - 385; Plants - 358; Viruses - 32; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|36377 : 604.0) no description available & (gnl|cdd|66777 : 174.0) no description available & (reliability: 1700.0) & (original description: Putative H3, Description = AtPHO1, PFAM = PF03124;PF03105)' T '34.7' 'transport.phosphate' 'nbv0.3scaffold21827_1-8339' '(at4g00370 : 398.0) Encodes an inorganic phosphate transporter (PHT4;4).; ANTR2; FUNCTIONS IN: organic anion transmembrane transporter activity, inorganic phosphate transmembrane transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 4;1 (TAIR:AT2G29650.1); Has 37886 Blast hits to 37799 proteins in 2473 species: Archae - 506; Bacteria - 30466; Metazoa - 2514; Fungi - 1637; Plants - 427; Viruses - 0; Other Eukaryotes - 2336 (source: NCBI BLink). & (gnl|cdd|37743 : 214.0) no description available & (reliability: 786.0) & (original description: Putative 1, Description = Phosphate transporter PHT4, PFAM = PF07690)' T '34.7' 'transport.phosphate' 'nbv0.3scaffold24408_349-14249' '(at5g20380 : 657.0) Encodes an inorganic phosphate transporter (PHT4;5).; phosphate transporter 4;5 (PHT4;5); FUNCTIONS IN: inorganic phosphate transmembrane transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: plastid, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G00370.1); Has 43170 Blast hits to 43076 proteins in 2553 species: Archae - 690; Bacteria - 35592; Metazoa - 2424; Fungi - 1396; Plants - 508; Viruses - 0; Other Eukaryotes - 2560 (source: NCBI BLink). & (gnl|cdd|37743 : 269.0) no description available & (gnl|cdd|87335 : 119.0) no description available & (reliability: 1314.0) & (original description: Putative ANTR6, Description = Probable anion transporter 6, chloroplastic, PFAM = PF07690)' T '34.7' 'transport.phosphate' 'nbv0.3scaffold52764_2471-9294' '(at3g29060 : 787.0) EXS (ERD1/XPR1/SYG1) family protein; LOCATED IN: integral to membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G14040.1); Has 1349 Blast hits to 1241 proteins in 219 species: Archae - 2; Bacteria - 7; Metazoa - 407; Fungi - 385; Plants - 358; Viruses - 32; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|36377 : 581.0) no description available & (gnl|cdd|66777 : 174.0) no description available & (reliability: 1574.0) & (original description: Putative H3, Description = AtPHO1, PFAM = PF03105;PF03124)' T '34.7' 'transport.phosphate' 'nbv0.3scaffold89165_2559-5497' '(at3g54700 : 813.0) Encodes Pht1;7, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341).; phosphate transporter 1;7 (PHT1;7); FUNCTIONS IN: phosphate transmembrane transporter activity, carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, phosphate transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Phosphate permease (InterPro:IPR004738), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 1;4 (TAIR:AT2G38940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35473 : 682.0) no description available & (gnl|cdd|84502 : 146.0) no description available & (reliability: 1626.0) & (original description: Putative pht1, Description = Phosphate transporter, PFAM = PF00083)' T '34.7' 'transport.phosphate' 'nbv0.5scaffold1245_128818-134861' '(at1g69480 : 603.0) EXS (ERD1/XPR1/SYG1) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: stem, sepal, stamen, seed; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G14040.1); Has 1143 Blast hits to 1074 proteins in 207 species: Archae - 0; Bacteria - 12; Metazoa - 268; Fungi - 392; Plants - 315; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (gnl|cdd|36377 : 459.0) no description available & (gnl|cdd|66777 : 158.0) no description available & (reliability: 1206.0) & (original description: Putative H3, Description = AtPHO1, PFAM = PF03105;PF03105;PF03124)' T '34.7' 'transport.phosphate' 'nbv0.5scaffold5271_129388-132962' '(at3g54700 : 774.0) Encodes Pht1;7, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341).; phosphate transporter 1;7 (PHT1;7); FUNCTIONS IN: phosphate transmembrane transporter activity, carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, phosphate transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Phosphate permease (InterPro:IPR004738), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 1;4 (TAIR:AT2G38940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35473 : 654.0) no description available & (gnl|cdd|84502 : 139.0) no description available & (reliability: 1548.0) & (original description: Putative pt1, Description = Phosphate transporter, PFAM = PF00083)' T '34.7' 'transport.phosphate' 'niben044scf00001541ctg004_27871-29637' '(at3g54700 : 379.0) Encodes Pht1;7, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341).; phosphate transporter 1;7 (PHT1;7); FUNCTIONS IN: phosphate transmembrane transporter activity, carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, phosphate transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Phosphate permease (InterPro:IPR004738), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 1;4 (TAIR:AT2G38940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35473 : 297.0) no description available & (reliability: 758.0) & (original description: Putative pht1, Description = Phosphate transporter, PFAM = PF00083)' T '34.7' 'transport.phosphate' 'niben044scf00001541ctg005_1-2432' '(at3g54700 : 398.0) Encodes Pht1;7, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341).; phosphate transporter 1;7 (PHT1;7); FUNCTIONS IN: phosphate transmembrane transporter activity, carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, phosphate transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Phosphate permease (InterPro:IPR004738), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 1;4 (TAIR:AT2G38940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35473 : 327.0) no description available & (reliability: 796.0) & (original description: Putative pht1, Description = Phosphate transporter, PFAM = PF00083)' T '34.7' 'transport.phosphate' 'niben044scf00003893ctg011_17662-20754' '(at3g29060 : 252.0) EXS (ERD1/XPR1/SYG1) family protein; LOCATED IN: integral to membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G14040.1); Has 1349 Blast hits to 1241 proteins in 219 species: Archae - 2; Bacteria - 7; Metazoa - 407; Fungi - 385; Plants - 358; Viruses - 32; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|36377 : 190.0) no description available & (gnl|cdd|66777 : 143.0) no description available & (reliability: 504.0) & (original description: Putative BnaA06g33770D, Description = BnaA06g33770D protein, PFAM = PF03124)' T '34.7' 'transport.phosphate' 'niben044scf00006199ctg010_4326-7487' '(at2g38940 : 825.0) Encodes Pht1;4, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341).; phosphate transporter 1;4 (PHT1;4); FUNCTIONS IN: phosphate transmembrane transporter activity, carbohydrate transmembrane transporter activity, inorganic phosphate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, phosphate transport, transmembrane transport; LOCATED IN: nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: male gametophyte, cultured cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Phosphate permease (InterPro:IPR004738), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 1;7 (TAIR:AT3G54700.1); Has 27225 Blast hits to 27133 proteins in 2002 species: Archae - 605; Bacteria - 19470; Metazoa - 1461; Fungi - 3457; Plants - 1450; Viruses - 2; Other Eukaryotes - 780 (source: NCBI BLink). & (gnl|cdd|35473 : 693.0) no description available & (gnl|cdd|84502 : 144.0) no description available & (reliability: 1650.0) & (original description: Putative pht1, Description = Phosphate transporter, PFAM = PF00083)' T '34.7' 'transport.phosphate' 'niben044scf00010697ctg007_4932-7285' '(at2g38940 : 198.0) Encodes Pht1;4, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341).; phosphate transporter 1;4 (PHT1;4); FUNCTIONS IN: phosphate transmembrane transporter activity, carbohydrate transmembrane transporter activity, inorganic phosphate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, phosphate transport, transmembrane transport; LOCATED IN: nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: male gametophyte, cultured cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Phosphate permease (InterPro:IPR004738), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 1;7 (TAIR:AT3G54700.1); Has 27225 Blast hits to 27133 proteins in 2002 species: Archae - 605; Bacteria - 19470; Metazoa - 1461; Fungi - 3457; Plants - 1450; Viruses - 2; Other Eukaryotes - 780 (source: NCBI BLink). & (gnl|cdd|35473 : 155.0) no description available & (reliability: 396.0) & (original description: Putative ipht, Description = Phosphate transporter, PFAM = )' T '34.7' 'transport.phosphate' 'niben044scf00016959ctg005_1-5524' '(at3g46980 : 457.0) Encodes an inorganic phosphate transporter (PHT4;3).; phosphate transporter 4;3 (PHT4;3); FUNCTIONS IN: organic anion transmembrane transporter activity, carbohydrate transmembrane transporter activity, inorganic phosphate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 4;2 (TAIR:AT2G38060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37743 : 230.0) no description available & (gnl|cdd|87335 : 99.8) no description available & (reliability: 914.0) & (original description: Putative PHT4, Description = Anion transporter 4, PFAM = PF07690)' T '34.7' 'transport.phosphate' 'niben044scf00022596ctg004_4083-11384' '(at3g29060 : 790.0) EXS (ERD1/XPR1/SYG1) family protein; LOCATED IN: integral to membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G14040.1); Has 1349 Blast hits to 1241 proteins in 219 species: Archae - 2; Bacteria - 7; Metazoa - 407; Fungi - 385; Plants - 358; Viruses - 32; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|36377 : 580.0) no description available & (gnl|cdd|66777 : 173.0) no description available & (reliability: 1580.0) & (original description: Putative H3, Description = AtPHO1, PFAM = PF03105;PF03124)' T '34.7' 'transport.phosphate' 'niben044scf00025595ctg000_10874-16917' '(gnl|cdd|36377 : 366.0) no description available & (at1g69480 : 295.0) EXS (ERD1/XPR1/SYG1) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: stem, sepal, stamen, seed; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G14040.1); Has 1143 Blast hits to 1074 proteins in 207 species: Archae - 0; Bacteria - 12; Metazoa - 268; Fungi - 392; Plants - 315; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (gnl|cdd|66777 : 161.0) no description available & (reliability: 590.0) & (original description: Putative BnaAnng37580D, Description = BnaAnng37580D protein, PFAM = PF03105;PF03105;PF03124)' T '34.7' 'transport.phosphate' 'niben044scf00058015ctg000_2075-6082' '(at5g35730 : 132.0) EXS (ERD1/XPR1/SYG1) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT2G32295.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative At2g32295, Description = SPX and EXS domain-containing protein 1, PFAM = PF03124)' T '34.7' 'transport.phosphate' 'niben101ctg16484_276-3883' '(at3g54700 : 743.0) Encodes Pht1;7, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341).; phosphate transporter 1;7 (PHT1;7); FUNCTIONS IN: phosphate transmembrane transporter activity, carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, phosphate transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Phosphate permease (InterPro:IPR004738), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 1;4 (TAIR:AT2G38940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35473 : 683.0) no description available & (gnl|cdd|84502 : 151.0) no description available & (reliability: 1486.0) & (original description: Putative pht1, Description = Phosphate transporter, PFAM = PF00083)' T '34.7' 'transport.phosphate' 'niben101scf00367_373418-385248' '(at3g23430 : 940.0) mutant is deficient in the transfer of phosphate from root epidermal and cortical cells to the xylem. encodes protein with the mainly hydrophilic N-terminal and the C-terminal containing 6 potential membrane-spanning domains.; phosphate 1 (PHO1); INVOLVED IN: cellular response to phosphate starvation, phosphate transport; LOCATED IN: integral to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G68740.1); Has 1217 Blast hits to 1145 proteins in 207 species: Archae - 2; Bacteria - 0; Metazoa - 255; Fungi - 408; Plants - 406; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink). & (gnl|cdd|36377 : 507.0) no description available & (gnl|cdd|66777 : 167.0) no description available & (reliability: 1880.0) & (original description: Putative PHO1, Description = Phosphate transporter PHO1, PFAM = PF03124;PF03105;PF03105)' T '34.7' 'transport.phosphate' 'niben101scf00367_374045-378486' '(at3g23430 : 585.0) mutant is deficient in the transfer of phosphate from root epidermal and cortical cells to the xylem. encodes protein with the mainly hydrophilic N-terminal and the C-terminal containing 6 potential membrane-spanning domains.; phosphate 1 (PHO1); INVOLVED IN: cellular response to phosphate starvation, phosphate transport; LOCATED IN: integral to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G68740.1); Has 1217 Blast hits to 1145 proteins in 207 species: Archae - 2; Bacteria - 0; Metazoa - 255; Fungi - 408; Plants - 406; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink). & (gnl|cdd|36377 : 371.0) no description available & (gnl|cdd|66777 : 150.0) no description available & (reliability: 1170.0) & (original description: Putative PHO1, Description = Phosphate transporter PHO1, PFAM = PF03124)' T '34.7' 'transport.phosphate' 'niben101scf00419_21494-24819' '(at5g44370 : 575.0) Encodes an inorganic phosphate transporter (PHT4;6).; phosphate transporter 4;6 (PHT4;6); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G00370.1); Has 29415 Blast hits to 29316 proteins in 2189 species: Archae - 421; Bacteria - 24028; Metazoa - 2328; Fungi - 945; Plants - 365; Viruses - 0; Other Eukaryotes - 1328 (source: NCBI BLink). & (gnl|cdd|37743 : 268.0) no description available & (gnl|cdd|87335 : 92.5) no description available & (reliability: 1150.0) & (original description: Putative ANTR5, Description = Probable anion transporter 5, PFAM = PF07690)' T '34.7' 'transport.phosphate' 'niben101scf00465_70583-78345' '(at1g68740 : 966.0) Encodes PHO1;H1, a member of the PHO1 family. Involved in inorganic phosphate (Pi) transport and homeostasis. Complements pho1 mutation.; PHO1;H1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cellular response to phosphate starvation, phosphate transport; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: phosphate 1 (TAIR:AT3G23430.1); Has 1136 Blast hits to 1082 proteins in 213 species: Archae - 2; Bacteria - 16; Metazoa - 271; Fungi - 358; Plants - 319; Viruses - 3; Other Eukaryotes - 167 (source: NCBI BLink). & (gnl|cdd|36377 : 511.0) no description available & (gnl|cdd|66777 : 190.0) no description available & (reliability: 1932.0) & (original description: Putative PHO1, Description = Phosphate transporter PHO1, PFAM = PF03105;PF03105;PF03124)' T '34.7' 'transport.phosphate' 'niben101scf01013_32818-39503' '(at2g38940 : 244.0) Encodes Pht1;4, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341).; phosphate transporter 1;4 (PHT1;4); FUNCTIONS IN: phosphate transmembrane transporter activity, carbohydrate transmembrane transporter activity, inorganic phosphate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, phosphate transport, transmembrane transport; LOCATED IN: nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: male gametophyte, cultured cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Phosphate permease (InterPro:IPR004738), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 1;7 (TAIR:AT3G54700.1); Has 27225 Blast hits to 27133 proteins in 2002 species: Archae - 605; Bacteria - 19470; Metazoa - 1461; Fungi - 3457; Plants - 1450; Viruses - 2; Other Eukaryotes - 780 (source: NCBI BLink). & (gnl|cdd|35473 : 199.0) no description available & (reliability: 488.0) & (original description: Putative pht1, Description = Phosphate transporter, PFAM = PF00083;PF00083)' T '34.7' 'transport.phosphate' 'niben101scf01013_36370-38723' '(at2g38940 : 197.0) Encodes Pht1;4, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341).; phosphate transporter 1;4 (PHT1;4); FUNCTIONS IN: phosphate transmembrane transporter activity, carbohydrate transmembrane transporter activity, inorganic phosphate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, phosphate transport, transmembrane transport; LOCATED IN: nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: male gametophyte, cultured cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Phosphate permease (InterPro:IPR004738), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 1;7 (TAIR:AT3G54700.1); Has 27225 Blast hits to 27133 proteins in 2002 species: Archae - 605; Bacteria - 19470; Metazoa - 1461; Fungi - 3457; Plants - 1450; Viruses - 2; Other Eukaryotes - 780 (source: NCBI BLink). & (gnl|cdd|35473 : 154.0) no description available & (reliability: 394.0) & (original description: Putative ipht, Description = Phosphate transporter, PFAM = )' T '34.7' 'transport.phosphate' 'niben101scf01369_57538-61493' '(at1g76430 : 568.0) Encodes Pht1;9, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341).; phosphate transporter 1;9 (PHT1;9); FUNCTIONS IN: phosphate transmembrane transporter activity, carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 1;8 (TAIR:AT1G20860.1); Has 32041 Blast hits to 31917 proteins in 2260 species: Archae - 700; Bacteria - 22282; Metazoa - 2246; Fungi - 4097; Plants - 1720; Viruses - 0; Other Eukaryotes - 996 (source: NCBI BLink). & (gnl|cdd|35473 : 539.0) no description available & (gnl|cdd|84502 : 135.0) no description available & (reliability: 1136.0) & (original description: Putative pht1, Description = H(+)/Pi cotransporter, PFAM = PF00083)' T '34.7' 'transport.phosphate' 'niben101scf01543_532535-536121' '(at3g54700 : 621.0) Encodes Pht1;7, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341).; phosphate transporter 1;7 (PHT1;7); FUNCTIONS IN: phosphate transmembrane transporter activity, carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, phosphate transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Phosphate permease (InterPro:IPR004738), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 1;4 (TAIR:AT2G38940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35473 : 545.0) no description available & (gnl|cdd|84502 : 149.0) no description available & (reliability: 1242.0) & (original description: Putative pht1, Description = Phosphate transporter, PFAM = PF00083)' T '34.7' 'transport.phosphate' 'niben101scf01543_545231-548817' '(at3g54700 : 593.0) Encodes Pht1;7, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341).; phosphate transporter 1;7 (PHT1;7); FUNCTIONS IN: phosphate transmembrane transporter activity, carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, phosphate transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Phosphate permease (InterPro:IPR004738), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 1;4 (TAIR:AT2G38940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35473 : 549.0) no description available & (gnl|cdd|84502 : 156.0) no description available & (reliability: 1186.0) & (original description: Putative PT4, Description = Phosphate transporter 4, PFAM = PF00083)' T '34.7' 'transport.phosphate' 'niben101scf01738_245199-253759' '(at2g38060 : 655.0) Encodes an inorganic phosphate transporter (PHT4;2).; phosphate transporter 4;2 (PHT4;2); FUNCTIONS IN: organic anion transmembrane transporter activity, carbohydrate transmembrane transporter activity, inorganic phosphate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: plastid, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 4;3 (TAIR:AT3G46980.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37743 : 311.0) no description available & (gnl|cdd|87335 : 109.0) no description available & (reliability: 1310.0) & (original description: Putative ANTR3, Description = Probable anion transporter 3, chloroplastic, PFAM = PF07690)' T '34.7' 'transport.phosphate' 'niben101scf02319_566718-572761' '(at1g69480 : 566.0) EXS (ERD1/XPR1/SYG1) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: stem, sepal, stamen, seed; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G14040.1); Has 1143 Blast hits to 1074 proteins in 207 species: Archae - 0; Bacteria - 12; Metazoa - 268; Fungi - 392; Plants - 315; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (gnl|cdd|36377 : 411.0) no description available & (gnl|cdd|66777 : 161.0) no description available & (reliability: 1132.0) & (original description: Putative H3, Description = AtPHO1, PFAM = PF03105;PF03105;PF03124;PF03124)' T '34.7' 'transport.phosphate' 'niben101scf02429_777591-784332' '(at3g29060 : 807.0) EXS (ERD1/XPR1/SYG1) family protein; LOCATED IN: integral to membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G14040.1); Has 1349 Blast hits to 1241 proteins in 219 species: Archae - 2; Bacteria - 7; Metazoa - 407; Fungi - 385; Plants - 358; Viruses - 32; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|36377 : 628.0) no description available & (gnl|cdd|66777 : 176.0) no description available & (reliability: 1614.0) & (original description: Putative H3, Description = AtPHO1, PFAM = PF03124;PF03105;PF03105)' T '34.7' 'transport.phosphate' 'niben101scf02665_361317-394173' '(at3g46980 : 623.0) Encodes an inorganic phosphate transporter (PHT4;3).; phosphate transporter 4;3 (PHT4;3); FUNCTIONS IN: organic anion transmembrane transporter activity, carbohydrate transmembrane transporter activity, inorganic phosphate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 4;2 (TAIR:AT2G38060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37743 : 296.0) no description available & (gnl|cdd|87335 : 99.4) no description available & (reliability: 1246.0) & (original description: Putative ANTR4, Description = Probable anion transporter 4, chloroplastic, PFAM = PF07690)' T '34.7' 'transport.phosphate' 'niben101scf02726_52709-56407' '(at3g54700 : 597.0) Encodes Pht1;7, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341).; phosphate transporter 1;7 (PHT1;7); FUNCTIONS IN: phosphate transmembrane transporter activity, carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, phosphate transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Phosphate permease (InterPro:IPR004738), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 1;4 (TAIR:AT2G38940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35473 : 552.0) no description available & (gnl|cdd|84502 : 158.0) no description available & (reliability: 1194.0) & (original description: Putative pht1, Description = Phosphate transporter, PFAM = PF00083)' T '34.7' 'transport.phosphate' 'niben101scf02937_1026431-1032094' '(at3g26570 : 641.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (gnl|cdd|37704 : 356.0) no description available & (gnl|cdd|85418 : 173.0) no description available & (reliability: 1282.0) & (original description: Putative cysP, Description = Phosphate transporter, PFAM = PF01384)' T '34.7' 'transport.phosphate' 'niben101scf03414_267047-277229' '(at2g29650 : 734.0) Encodes an inorganic phosphate transporter that is localized to the thylakoid membrane.; anion transporter 1 (ANTR1); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G00370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37743 : 369.0) no description available & (gnl|cdd|87335 : 135.0) no description available & (reliability: 1468.0) & (original description: Putative ANTR1, Description = Sodium-dependent phosphate transport protein 1, chloroplastic, PFAM = PF07690)' T '34.7' 'transport.phosphate' 'niben101scf03717_160893-166335' '(at3g26570 : 679.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (gnl|cdd|37704 : 361.0) no description available & (gnl|cdd|85418 : 175.0) no description available & (reliability: 1358.0) & (original description: Putative cysP, Description = Phosphate transporter, PFAM = PF01384)' T '34.7' 'transport.phosphate' 'niben101scf04386_394404-397729' '(at5g44370 : 601.0) Encodes an inorganic phosphate transporter (PHT4;6).; phosphate transporter 4;6 (PHT4;6); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G00370.1); Has 29415 Blast hits to 29316 proteins in 2189 species: Archae - 421; Bacteria - 24028; Metazoa - 2328; Fungi - 945; Plants - 365; Viruses - 0; Other Eukaryotes - 1328 (source: NCBI BLink). & (gnl|cdd|37743 : 267.0) no description available & (gnl|cdd|87335 : 91.3) no description available & (reliability: 1202.0) & (original description: Putative ANTR5, Description = Probable anion transporter 5, PFAM = PF07690)' T '34.7' 'transport.phosphate' 'niben101scf05712_250418-257079' '(at1g69480 : 833.0) EXS (ERD1/XPR1/SYG1) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: stem, sepal, stamen, seed; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G14040.1); Has 1143 Blast hits to 1074 proteins in 207 species: Archae - 0; Bacteria - 12; Metazoa - 268; Fungi - 392; Plants - 315; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (gnl|cdd|36377 : 527.0) no description available & (gnl|cdd|66777 : 188.0) no description available & (reliability: 1666.0) & (original description: Putative H3, Description = AtPHO1, PFAM = PF03124;PF03105)' T '34.7' 'transport.phosphate' 'niben101scf06017_11425-15032' '(at2g38940 : 788.0) Encodes Pht1;4, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341).; phosphate transporter 1;4 (PHT1;4); FUNCTIONS IN: phosphate transmembrane transporter activity, carbohydrate transmembrane transporter activity, inorganic phosphate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, phosphate transport, transmembrane transport; LOCATED IN: nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: male gametophyte, cultured cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Phosphate permease (InterPro:IPR004738), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 1;7 (TAIR:AT3G54700.1); Has 27225 Blast hits to 27133 proteins in 2002 species: Archae - 605; Bacteria - 19470; Metazoa - 1461; Fungi - 3457; Plants - 1450; Viruses - 2; Other Eukaryotes - 780 (source: NCBI BLink). & (gnl|cdd|35473 : 693.0) no description available & (gnl|cdd|84502 : 144.0) no description available & (reliability: 1576.0) & (original description: Putative pht1, Description = Phosphate transporter, PFAM = PF00083)' T '34.7' 'transport.phosphate' 'niben101scf09172_113583-128936' '(at5g35730 : 667.0) EXS (ERD1/XPR1/SYG1) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT2G32295.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36377 : 247.0) no description available & (gnl|cdd|66777 : 133.0) no description available & (reliability: 1334.0) & (original description: Putative At5g35730, Description = EXS (ERD1/XPR1/SYG1) domain protein, PFAM = PF03124)' T '34.7' 'transport.phosphate' 'niben101scf13017_98898-116525' '(at2g38940 : 817.0) Encodes Pht1;4, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341).; phosphate transporter 1;4 (PHT1;4); FUNCTIONS IN: phosphate transmembrane transporter activity, carbohydrate transmembrane transporter activity, inorganic phosphate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, phosphate transport, transmembrane transport; LOCATED IN: nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: male gametophyte, cultured cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Phosphate permease (InterPro:IPR004738), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 1;7 (TAIR:AT3G54700.1); Has 27225 Blast hits to 27133 proteins in 2002 species: Archae - 605; Bacteria - 19470; Metazoa - 1461; Fungi - 3457; Plants - 1450; Viruses - 2; Other Eukaryotes - 780 (source: NCBI BLink). & (gnl|cdd|35473 : 681.0) no description available & (gnl|cdd|84502 : 141.0) no description available & (reliability: 1634.0) & (original description: Putative pht1, Description = Phosphate transporter, PFAM = PF00083)' T '34.7' 'transport.phosphate' 'niben101scf13942_63795-67120' '(at5g44370 : 630.0) Encodes an inorganic phosphate transporter (PHT4;6).; phosphate transporter 4;6 (PHT4;6); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G00370.1); Has 29415 Blast hits to 29316 proteins in 2189 species: Archae - 421; Bacteria - 24028; Metazoa - 2328; Fungi - 945; Plants - 365; Viruses - 0; Other Eukaryotes - 1328 (source: NCBI BLink). & (gnl|cdd|37743 : 273.0) no description available & (gnl|cdd|87335 : 94.4) no description available & (reliability: 1260.0) & (original description: Putative ANTR5, Description = Probable anion transporter 5, PFAM = PF07690)' T '34.7' 'transport.phosphate' 'niben101scf14079_991-4619' '(at2g38940 : 812.0) Encodes Pht1;4, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341).; phosphate transporter 1;4 (PHT1;4); FUNCTIONS IN: phosphate transmembrane transporter activity, carbohydrate transmembrane transporter activity, inorganic phosphate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, phosphate transport, transmembrane transport; LOCATED IN: nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: male gametophyte, cultured cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Phosphate permease (InterPro:IPR004738), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 1;7 (TAIR:AT3G54700.1); Has 27225 Blast hits to 27133 proteins in 2002 species: Archae - 605; Bacteria - 19470; Metazoa - 1461; Fungi - 3457; Plants - 1450; Viruses - 2; Other Eukaryotes - 780 (source: NCBI BLink). & (gnl|cdd|35473 : 684.0) no description available & (gnl|cdd|84502 : 146.0) no description available & (reliability: 1624.0) & (original description: Putative pht1, Description = Phosphate transporter, PFAM = PF00083)' T '34.7' 'transport.phosphate' 'niben101scf22058_20351-27396' '(at3g29060 : 848.0) EXS (ERD1/XPR1/SYG1) family protein; LOCATED IN: integral to membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G14040.1); Has 1349 Blast hits to 1241 proteins in 219 species: Archae - 2; Bacteria - 7; Metazoa - 407; Fungi - 385; Plants - 358; Viruses - 32; Other Eukaryotes - 158 (source: NCBI BLink). & (gnl|cdd|36377 : 574.0) no description available & (gnl|cdd|66777 : 177.0) no description available & (reliability: 1696.0) & (original description: Putative H3, Description = AtPHO1, PFAM = PF03105;PF03124)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'nbv0.3scaffold13322_29262-35901' '(at5g12860 : 689.0) dicarboxylate transporter 1 (DiT1); FUNCTIONS IN: oxoglutarate:malate antiporter activity; INVOLVED IN: N-terminal protein myristoylation, malate transport, response to nematode; LOCATED IN: mitochondrion, chloroplast, plastid, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sodium/sulphate symporter (InterPro:IPR001898); BEST Arabidopsis thaliana protein match is: dicarboxylate transport 2.1 (TAIR:AT5G64290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q41364|sot1_spiol : 681.0) 2-oxoglutarate/malate translocator, chloroplast precursor - Spinacia oleracea (Spinach) & (gnl|cdd|85137 : 487.0) no description available & (reliability: 1378.0) & (original description: Putative DIT1, Description = Dicarboxylate transporter 1, chloroplastic, PFAM = PF00939)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'nbv0.3scaffold13873_37633-40525' '(at1g61800 : 217.0) glucose6-Phosphate/phosphate transporter 2; glucose-6-phosphate/phosphate translocator 2 (GPT2); FUNCTIONS IN: antiporter activity, glucose-6-phosphate transmembrane transporter activity; INVOLVED IN: in 7 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 2231 Blast hits to 2230 proteins in 287 species: Archae - 2; Bacteria - 36; Metazoa - 463; Fungi - 366; Plants - 1109; Viruses - 0; Other Eukaryotes - 255 (source: NCBI BLink). & (gnl|cdd|36654 : 117.0) no description available & (gnl|cdd|66803 : 106.0) no description available & (p11869|tpt_spiol : 94.4) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (p36) (E29) - Spinacia oleracea (Spinach) & (reliability: 434.0) & (original description: Putative pt, Description = Glucose-6-phosphate/phosphate translocator 1, chloroplastic, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'nbv0.3scaffold19126_11544-15693' '(at1g61800 : 429.0) glucose6-Phosphate/phosphate transporter 2; glucose-6-phosphate/phosphate translocator 2 (GPT2); FUNCTIONS IN: antiporter activity, glucose-6-phosphate transmembrane transporter activity; INVOLVED IN: in 7 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 2231 Blast hits to 2230 proteins in 287 species: Archae - 2; Bacteria - 36; Metazoa - 463; Fungi - 366; Plants - 1109; Viruses - 0; Other Eukaryotes - 255 (source: NCBI BLink). & (gnl|cdd|36654 : 205.0) no description available & (p21727|tpt_pea : 196.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (p36) (E30) - Pisum sativum (Garden pea) & (reliability: 858.0) & (original description: Putative gpt, Description = Glucose-6-phosphate/phosphate translocator, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'nbv0.3scaffold21972_1903-7616' '(p27081|adt2_soltu : 650.0) ADP,ATP carrier protein, mitochondrial precursor (ADP/ATP translocase) (Adenine nucleotide translocator) (ANT) (Fragment) - Solanum tuberosum (Potato) & (at3g08580 : 563.0) mitochondrial ADP/ATP carrier; ADP/ATP carrier 1 (AAC1); FUNCTIONS IN: binding, copper ion binding, ATP:ADP antiporter activity; INVOLVED IN: transport, purine nucleotide transport; LOCATED IN: in 10 components; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 2 (TAIR:AT5G13490.2); Has 19858 Blast hits to 12534 proteins in 484 species: Archae - 0; Bacteria - 0; Metazoa - 8967; Fungi - 5060; Plants - 3882; Viruses - 0; Other Eukaryotes - 1949 (source: NCBI BLink). & (gnl|cdd|35968 : 435.0) no description available & (gnl|cdd|84566 : 90.3) no description available & (reliability: 1126.0) & (original description: Putative ANT, Description = ADP,ATP carrier protein, mitochondrial, PFAM = PF00153;PF00153;PF00153)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'nbv0.3scaffold28377_10266-16732' '(at5g54800 : 472.0) Encodes glucose6-Phosphate/phosphate transporter 1. Essential for pollen maturation and embryo sac development.; glucose 6-phosphate/phosphate translocator 1 (GPT1); FUNCTIONS IN: antiporter activity, glucose-6-phosphate transmembrane transporter activity; INVOLVED IN: vacuole organization, pollen maturation, embryo sac development, response to nematode, lipid particle organization; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: glucose-6-phosphate/phosphate translocator 2 (TAIR:AT1G61800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36654 : 258.0) no description available & (p11869|tpt_spiol : 226.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (p36) (E29) - Spinacia oleracea (Spinach) & (gnl|cdd|66803 : 119.0) no description available & (reliability: 944.0) & (original description: Putative GPT1, Description = Glucose-6-phosphate/phosphate translocator 1, chloroplastic, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'nbv0.3scaffold29232_684-4107' '(at2g25520 : 466.0) Drug/metabolite transporter superfamily protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT4G32390.1); Has 2445 Blast hits to 2439 proteins in 251 species: Archae - 0; Bacteria - 11; Metazoa - 512; Fungi - 442; Plants - 1237; Viruses - 0; Other Eukaryotes - 243 (source: NCBI BLink). & (gnl|cdd|36654 : 249.0) no description available & (gnl|cdd|66803 : 94.1) no description available & (reliability: 932.0) & (original description: Putative mot21, Description = Phosphate translocator-like protein, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'nbv0.3scaffold33039_15690-21905' '(at3g14410 : 413.0) Nucleotide/sugar transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G53660.1); Has 2316 Blast hits to 2309 proteins in 275 species: Archae - 4; Bacteria - 65; Metazoa - 512; Fungi - 392; Plants - 1095; Viruses - 0; Other Eukaryotes - 248 (source: NCBI BLink). & (gnl|cdd|36654 : 232.0) no description available & (gnl|cdd|66803 : 100.0) no description available & (reliability: 826.0) & (original description: Putative mot21, Description = Putative sugar phosphate/phosphate translocator, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'nbv0.3scaffold45127_8609-17116' '(at1g77610 : 466.0) EamA-like transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: golgi nucleotide sugar transporter 5 (TAIR:AT1G21870.1); Has 3475 Blast hits to 3470 proteins in 365 species: Archae - 2; Bacteria - 169; Metazoa - 728; Fungi - 565; Plants - 1539; Viruses - 0; Other Eukaryotes - 472 (source: NCBI BLink). & (gnl|cdd|36654 : 236.0) no description available & (p21727|tpt_pea : 92.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (p36) (E30) - Pisum sativum (Garden pea) & (reliability: 932.0) & (original description: Putative GONST5, Description = UDP-galactose transporter 1, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'nbv0.3scaffold61356_2954-9116' '(p29463|tpt_soltu : 659.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (E29) - Solanum tuberosum (Potato) & (at5g46110 : 598.0) mutant has Altered acclimation responses; Chloroplast Triose Phosphate Translocator; ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2 (APE2); FUNCTIONS IN: antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853), Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 2560 Blast hits to 2558 proteins in 418 species: Archae - 2; Bacteria - 316; Metazoa - 499; Fungi - 419; Plants - 1040; Viruses - 0; Other Eukaryotes - 284 (source: NCBI BLink). & (gnl|cdd|36654 : 219.0) no description available & (gnl|cdd|66803 : 106.0) no description available & (reliability: 1196.0) & (original description: Putative TPT, Description = Triose phosphate/phosphate translocator, chloroplastic, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'nbv0.3scaffold121639_1-2078' '(at1g12500 : 421.0) Nucleotide-sugar transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT3G11320.1); Has 2763 Blast hits to 2761 proteins in 260 species: Archae - 6; Bacteria - 37; Metazoa - 632; Fungi - 440; Plants - 1334; Viruses - 0; Other Eukaryotes - 314 (source: NCBI BLink). & (gnl|cdd|36654 : 236.0) no description available & (gnl|cdd|66803 : 96.4) no description available & (reliability: 842.0) & (original description: Putative At1g12500, Description = Probable sugar phosphate/phosphate translocator At1g12500, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'nbv0.5scaffold135_760218-765685' '(at5g46110 : 470.0) mutant has Altered acclimation responses; Chloroplast Triose Phosphate Translocator; ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2 (APE2); FUNCTIONS IN: antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853), Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 2560 Blast hits to 2558 proteins in 418 species: Archae - 2; Bacteria - 316; Metazoa - 499; Fungi - 419; Plants - 1040; Viruses - 0; Other Eukaryotes - 284 (source: NCBI BLink). & (p29463|tpt_soltu : 465.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (E29) - Solanum tuberosum (Potato) & (gnl|cdd|36654 : 192.0) no description available & (gnl|cdd|66803 : 88.3) no description available & (reliability: 940.0) & (original description: Putative pt, Description = Triose phosphate/phosphate translocator, chloroplastic, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'nbv0.5scaffold302_614779-623770' '(at1g77610 : 477.0) EamA-like transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: golgi nucleotide sugar transporter 5 (TAIR:AT1G21870.1); Has 3475 Blast hits to 3470 proteins in 365 species: Archae - 2; Bacteria - 169; Metazoa - 728; Fungi - 565; Plants - 1539; Viruses - 0; Other Eukaryotes - 472 (source: NCBI BLink). & (gnl|cdd|36654 : 242.0) no description available & (p21727|tpt_pea : 93.2) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (p36) (E30) - Pisum sativum (Garden pea) & (reliability: 954.0) & (original description: Putative GONST5, Description = UDP-galactose transporter 1, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'nbv0.5scaffold364_596468-771156' '(q7xtq5|mex1_orysa : 175.0) Maltose excess protein 1-like, chloroplast precursor - Oryza sativa (Rice) & (at5g17520 : 162.0) Encodes a maltose transporter that is expressed in leaves and roots. Mutations at the MEX1 locus cause accumulation of both starch and maltose in leaves, with maltose levels at least 40 times higher than that of wild-type. This gene encodes a protein located in the chloroplast envelope.; ROOT CAP 1 (RCP1); FUNCTIONS IN: maltose transmembrane transporter activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17523.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative MEX, Description = Maltose excess protein 1-like protein, PFAM = )' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'nbv0.5scaffold2317_15462-106686' '(at1g61800 : 483.0) glucose6-Phosphate/phosphate transporter 2; glucose-6-phosphate/phosphate translocator 2 (GPT2); FUNCTIONS IN: antiporter activity, glucose-6-phosphate transmembrane transporter activity; INVOLVED IN: in 7 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 2231 Blast hits to 2230 proteins in 287 species: Archae - 2; Bacteria - 36; Metazoa - 463; Fungi - 366; Plants - 1109; Viruses - 0; Other Eukaryotes - 255 (source: NCBI BLink). & (gnl|cdd|36654 : 254.0) no description available & (p21727|tpt_pea : 210.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (p36) (E30) - Pisum sativum (Garden pea) & (gnl|cdd|66803 : 115.0) no description available & (reliability: 966.0) & (original description: Putative GPT2, Description = Glucose-6-phosphate/phosphate translocator 2, chloroplastic, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'nbv0.5scaffold3888_50382-52822' '(at5g05820 : 227.0) Nucleotide-sugar transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT3G11320.1); Has 3144 Blast hits to 3139 proteins in 327 species: Archae - 14; Bacteria - 156; Metazoa - 754; Fungi - 474; Plants - 1369; Viruses - 0; Other Eukaryotes - 377 (source: NCBI BLink). & (gnl|cdd|36654 : 110.0) no description available & (reliability: 454.0) & (original description: Putative BnaC05g42810D, Description = BnaC05g42810D protein, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'nbv0.5scaffold5161_84434-89550' '(at4g28390 : 530.0) Encodes a mitochondrial ADP/ATP carrier protein. Shown in heterologous systems to be located in the plasma membrane. Has comparable affinity for ADP and ATP (in E.coli).; ADP/ATP carrier 3 (AAC3); FUNCTIONS IN: binding, ATP:ADP antiporter activity; INVOLVED IN: transport, mitochondrial transport, purine nucleotide transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 2 (TAIR:AT5G13490.2); Has 20286 Blast hits to 12392 proteins in 480 species: Archae - 0; Bacteria - 0; Metazoa - 9416; Fungi - 5054; Plants - 3787; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (p04709|adt1_maize : 510.0) ADP,ATP carrier protein 1, mitochondrial precursor (ADP/ATP translocase 1) (Adenine nucleotide translocator 1) (ANT 1) - Zea mays (Maize) & (gnl|cdd|35968 : 433.0) no description available & (gnl|cdd|84566 : 92.3) no description available & (reliability: 954.0) & (original description: Putative AAC1, Description = ADP,ATP carrier protein 1, PFAM = PF00153;PF00153;PF00153)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben044scf00001418ctg012_571-3803' '(q7xtq5|mex1_orysa : 155.0) Maltose excess protein 1-like, chloroplast precursor - Oryza sativa (Rice) & (at5g17520 : 142.0) Encodes a maltose transporter that is expressed in leaves and roots. Mutations at the MEX1 locus cause accumulation of both starch and maltose in leaves, with maltose levels at least 40 times higher than that of wild-type. This gene encodes a protein located in the chloroplast envelope.; ROOT CAP 1 (RCP1); FUNCTIONS IN: maltose transmembrane transporter activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17523.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative MEX, Description = Maltose excess protein 1-like protein, PFAM = )' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben044scf00001888ctg003_5913-12550' '(at3g10290 : 440.0) Nucleotide-sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT5G04160.1); Has 2900 Blast hits to 2898 proteins in 294 species: Archae - 4; Bacteria - 137; Metazoa - 666; Fungi - 435; Plants - 1330; Viruses - 0; Other Eukaryotes - 328 (source: NCBI BLink). & (gnl|cdd|36654 : 225.0) no description available & (gnl|cdd|66803 : 85.6) no description available & (reliability: 880.0) & (original description: Putative At3g11320, Description = Probable sugar phosphate/phosphate translocator At3g11320, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben044scf00010548ctg008_2280-10224' '(at1g77610 : 394.0) EamA-like transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: golgi nucleotide sugar transporter 5 (TAIR:AT1G21870.1); Has 3475 Blast hits to 3470 proteins in 365 species: Archae - 2; Bacteria - 169; Metazoa - 728; Fungi - 565; Plants - 1539; Viruses - 0; Other Eukaryotes - 472 (source: NCBI BLink). & (gnl|cdd|36654 : 195.0) no description available & (reliability: 788.0) & (original description: Putative GONST5, Description = UDP-galactose transporter 1, PFAM = PF03151;PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben044scf00019101ctg002_13566-17872' '(at4g28390 : 505.0) Encodes a mitochondrial ADP/ATP carrier protein. Shown in heterologous systems to be located in the plasma membrane. Has comparable affinity for ADP and ATP (in E.coli).; ADP/ATP carrier 3 (AAC3); FUNCTIONS IN: binding, ATP:ADP antiporter activity; INVOLVED IN: transport, mitochondrial transport, purine nucleotide transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 2 (TAIR:AT5G13490.2); Has 20286 Blast hits to 12392 proteins in 480 species: Archae - 0; Bacteria - 0; Metazoa - 9416; Fungi - 5054; Plants - 3787; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (p25083|adt1_soltu : 492.0) ADP,ATP carrier protein, mitochondrial precursor (ADP/ATP translocase) (Adenine nucleotide translocator) (ANT) - Solanum tuberosum (Potato) & (gnl|cdd|35968 : 430.0) no description available & (gnl|cdd|84566 : 91.5) no description available & (reliability: 926.0) & (original description: Putative AAC3, Description = ADP,ATP carrier protein 3, mitochondrial, PFAM = PF00153;PF00153;PF00153)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben044scf00027736ctg002_883-6691' '(q7xtq5|mex1_orysa : 360.0) Maltose excess protein 1-like, chloroplast precursor - Oryza sativa (Rice) & (at5g17520 : 357.0) Encodes a maltose transporter that is expressed in leaves and roots. Mutations at the MEX1 locus cause accumulation of both starch and maltose in leaves, with maltose levels at least 40 times higher than that of wild-type. This gene encodes a protein located in the chloroplast envelope.; ROOT CAP 1 (RCP1); FUNCTIONS IN: maltose transmembrane transporter activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17523.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 714.0) & (original description: Putative MEX1, Description = Maltose excess protein 1, chloroplastic, PFAM = )' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben044scf00028393ctg006_18291-20295' '(at4g28390 : 154.0) Encodes a mitochondrial ADP/ATP carrier protein. Shown in heterologous systems to be located in the plasma membrane. Has comparable affinity for ADP and ATP (in E.coli).; ADP/ATP carrier 3 (AAC3); FUNCTIONS IN: binding, ATP:ADP antiporter activity; INVOLVED IN: transport, mitochondrial transport, purine nucleotide transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 2 (TAIR:AT5G13490.2); Has 20286 Blast hits to 12392 proteins in 480 species: Archae - 0; Bacteria - 0; Metazoa - 9416; Fungi - 5054; Plants - 3787; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (p27081|adt2_soltu : 142.0) ADP,ATP carrier protein, mitochondrial precursor (ADP/ATP translocase) (Adenine nucleotide translocator) (ANT) (Fragment) - Solanum tuberosum (Potato) & (gnl|cdd|35968 : 123.0) no description available & (reliability: 290.0) & (original description: Putative aac, Description = ADP,ATP carrier protein, PFAM = PF00153)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben044scf00030593ctg002_844-6486' '(at1g06470 : 259.0) Nucleotide/sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT5G25400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36656 : 151.0) no description available & (reliability: 518.0) & (original description: Putative SLC35C2, Description = TPT-domain-containing protein, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben044scf00051581ctg000_1446-6631' '(at4g32400 : 474.0) Encodes a plastidial nucleotide uniport carrier protein required to export newly synthesized adenylates into the cytosol.; SODIUM HYPERSENSITIVE 1 (SHS1); FUNCTIONS IN: nucleotide transmembrane transporter activity, binding, transporter activity; INVOLVED IN: nucleotide transport, transport, mitochondrial transport, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, mitochondrial inner membrane, chloroplast, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT3G20240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p29518|bt1_maize : 362.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|35971 : 286.0) no description available & (gnl|cdd|84566 : 96.9) no description available & (reliability: 948.0) & (original description: Putative BT1, Description = Adenine nucleotide transporter BT1, chloroplastic/mitochondrial, PFAM = PF00153;PF00153;PF00153)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf00347_53276-58008' '(at4g28390 : 526.0) Encodes a mitochondrial ADP/ATP carrier protein. Shown in heterologous systems to be located in the plasma membrane. Has comparable affinity for ADP and ATP (in E.coli).; ADP/ATP carrier 3 (AAC3); FUNCTIONS IN: binding, ATP:ADP antiporter activity; INVOLVED IN: transport, mitochondrial transport, purine nucleotide transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 2 (TAIR:AT5G13490.2); Has 20286 Blast hits to 12392 proteins in 480 species: Archae - 0; Bacteria - 0; Metazoa - 9416; Fungi - 5054; Plants - 3787; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (p04709|adt1_maize : 509.0) ADP,ATP carrier protein 1, mitochondrial precursor (ADP/ATP translocase 1) (Adenine nucleotide translocator 1) (ANT 1) - Zea mays (Maize) & (gnl|cdd|35968 : 435.0) no description available & (gnl|cdd|84566 : 92.3) no description available & (reliability: 954.0) & (original description: Putative AAC3, Description = ADP,ATP carrier protein 3, mitochondrial, PFAM = PF00153;PF00153;PF00153)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf00453_119327-126832' '(at3g10290 : 442.0) Nucleotide-sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT5G04160.1); Has 2900 Blast hits to 2898 proteins in 294 species: Archae - 4; Bacteria - 137; Metazoa - 666; Fungi - 435; Plants - 1330; Viruses - 0; Other Eukaryotes - 328 (source: NCBI BLink). & (gnl|cdd|36654 : 225.0) no description available & (gnl|cdd|66803 : 85.2) no description available & (reliability: 884.0) & (original description: Putative At5g04160, Description = Probable sugar phosphate/phosphate translocator At5g04160, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf00468_147333-154954' '(at5g33320 : 474.0) Encodes a plastid inner envelope protein PPT (phosphoenolpyruvate/phosphate translocator) that catalyzes the transport of phosphoenolpyruvate and phosphate across the inner envelope membrane of plastids.; CAB UNDEREXPRESSED 1 (CUE1); FUNCTIONS IN: antiporter activity; INVOLVED IN: transport; LOCATED IN: mitochondrion, chloroplast, plastid, plastid inner membrane, chloroplast envelope; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate (pep)/phosphate translocator 2 (TAIR:AT3G01550.1); Has 2791 Blast hits to 2789 proteins in 409 species: Archae - 9; Bacteria - 295; Metazoa - 571; Fungi - 421; Plants - 1194; Viruses - 0; Other Eukaryotes - 301 (source: NCBI BLink). & (gnl|cdd|36654 : 241.0) no description available & (p21727|tpt_pea : 212.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (p36) (E30) - Pisum sativum (Garden pea) & (gnl|cdd|66803 : 122.0) no description available & (reliability: 948.0) & (original description: Putative PPT1, Description = Phosphoenolpyruvate/phosphate translocator 1, chloroplastic, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf00471_303235-306503' '(at5g17630 : 517.0) Nucleotide/sugar transporter family protein; FUNCTIONS IN: antiporter activity, glucose transmembrane transporter activity; INVOLVED IN: hexose phosphate transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36654 : 235.0) no description available & (p11869|tpt_spiol : 232.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (p36) (E29) - Spinacia oleracea (Spinach) & (gnl|cdd|66803 : 112.0) no description available & (reliability: 1034.0) & (original description: Putative XPT, Description = Xylulose 5-phosphate/phosphate translocator, chloroplastic, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf00536_798-15459' '(at1g06470 : 466.0) Nucleotide/sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT5G25400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36656 : 212.0) no description available & (gnl|cdd|66803 : 118.0) no description available & (reliability: 932.0) & (original description: Putative At1g06470, Description = Probable sugar phosphate/phosphate translocator At1g06470, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf00629_148272-163649' '(at5g12860 : 692.0) dicarboxylate transporter 1 (DiT1); FUNCTIONS IN: oxoglutarate:malate antiporter activity; INVOLVED IN: N-terminal protein myristoylation, malate transport, response to nematode; LOCATED IN: mitochondrion, chloroplast, plastid, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sodium/sulphate symporter (InterPro:IPR001898); BEST Arabidopsis thaliana protein match is: dicarboxylate transport 2.1 (TAIR:AT5G64290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q41364|sot1_spiol : 683.0) 2-oxoglutarate/malate translocator, chloroplast precursor - Spinacia oleracea (Spinach) & (gnl|cdd|85137 : 489.0) no description available & (reliability: 1384.0) & (original description: Putative DIT1, Description = Dicarboxylate transporter 1, chloroplastic, PFAM = PF00939)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf00757_234100-242301' '(at3g17430 : 556.0) Nucleotide-sugar transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G48230.1); Has 2225 Blast hits to 2218 proteins in 235 species: Archae - 0; Bacteria - 16; Metazoa - 439; Fungi - 391; Plants - 1151; Viruses - 0; Other Eukaryotes - 228 (source: NCBI BLink). & (gnl|cdd|36654 : 244.0) no description available & (gnl|cdd|66803 : 95.2) no description available & (reliability: 1112.0) & (original description: Putative mot21, Description = Putative sugar phosphate/phosphate translocator, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf00761_489307-495062' '(p27081|adt2_soltu : 652.0) ADP,ATP carrier protein, mitochondrial precursor (ADP/ATP translocase) (Adenine nucleotide translocator) (ANT) (Fragment) - Solanum tuberosum (Potato) & (at3g08580 : 565.0) mitochondrial ADP/ATP carrier; ADP/ATP carrier 1 (AAC1); FUNCTIONS IN: binding, copper ion binding, ATP:ADP antiporter activity; INVOLVED IN: transport, purine nucleotide transport; LOCATED IN: in 10 components; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 2 (TAIR:AT5G13490.2); Has 19858 Blast hits to 12534 proteins in 484 species: Archae - 0; Bacteria - 0; Metazoa - 8967; Fungi - 5060; Plants - 3882; Viruses - 0; Other Eukaryotes - 1949 (source: NCBI BLink). & (gnl|cdd|35968 : 438.0) no description available & (gnl|cdd|84566 : 91.1) no description available & (reliability: 1130.0) & (original description: Putative ANT, Description = ADP,ATP carrier protein, mitochondrial, PFAM = PF00153;PF00153;PF00153)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf00781_21297-30994' '(at1g77610 : 496.0) EamA-like transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: golgi nucleotide sugar transporter 5 (TAIR:AT1G21870.1); Has 3475 Blast hits to 3470 proteins in 365 species: Archae - 2; Bacteria - 169; Metazoa - 728; Fungi - 565; Plants - 1539; Viruses - 0; Other Eukaryotes - 472 (source: NCBI BLink). & (gnl|cdd|36654 : 251.0) no description available & (p21727|tpt_pea : 94.4) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (p36) (E30) - Pisum sativum (Garden pea) & (gnl|cdd|66803 : 82.9) no description available & (reliability: 992.0) & (original description: Putative GONST5, Description = UDP-galactose transporter 1, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf00813_229631-233414' '(p25083|adt1_soltu : 665.0) ADP,ATP carrier protein, mitochondrial precursor (ADP/ATP translocase) (Adenine nucleotide translocator) (ANT) - Solanum tuberosum (Potato) & (at5g13490 : 569.0) Encodes mitochondrial ADP/ATP carrier; ADP/ATP carrier 2 (AAC2); FUNCTIONS IN: protein binding, binding, copper ion binding, ATP:ADP antiporter activity; INVOLVED IN: transport, purine nucleotide transport; LOCATED IN: mitochondrial envelope, mitochondrion, mitochondrial inner membrane, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 1 (TAIR:AT3G08580.2); Has 20201 Blast hits to 12470 proteins in 482 species: Archae - 0; Bacteria - 0; Metazoa - 9190; Fungi - 5149; Plants - 3866; Viruses - 0; Other Eukaryotes - 1996 (source: NCBI BLink). & (gnl|cdd|35968 : 437.0) no description available & (gnl|cdd|84566 : 91.5) no description available & (reliability: 1112.0) & (original description: Putative ANT, Description = ADP,ATP carrier protein, mitochondrial, PFAM = PF00153;PF00153;PF00153)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf00897_244921-250180' '(at3g14410 : 225.0) Nucleotide/sugar transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G53660.1); Has 2316 Blast hits to 2309 proteins in 275 species: Archae - 4; Bacteria - 65; Metazoa - 512; Fungi - 392; Plants - 1095; Viruses - 0; Other Eukaryotes - 248 (source: NCBI BLink). & (gnl|cdd|36654 : 103.0) no description available & (reliability: 450.0) & (original description: Putative mot21, Description = Putative sugar phosphate/phosphate translocator, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf01314_265848-268891' '(at5g25400 : 484.0) Nucleotide-sugar transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT5G11230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36654 : 261.0) no description available & (gnl|cdd|66803 : 100.0) no description available & (reliability: 968.0) & (original description: Putative mot21, Description = Putative sugar phosphate/phosphate translocator, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf01418_370354-373383' '(at5g25400 : 493.0) Nucleotide-sugar transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT5G11230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36654 : 241.0) no description available & (gnl|cdd|66803 : 90.2) no description available & (reliability: 986.0) & (original description: Putative mot21, Description = Putative sugar phosphate/phosphate translocator, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf01517_572947-579854' '(at3g14410 : 461.0) Nucleotide/sugar transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G53660.1); Has 2316 Blast hits to 2309 proteins in 275 species: Archae - 4; Bacteria - 65; Metazoa - 512; Fungi - 392; Plants - 1095; Viruses - 0; Other Eukaryotes - 248 (source: NCBI BLink). & (gnl|cdd|36654 : 218.0) no description available & (gnl|cdd|66803 : 97.2) no description available & (reliability: 922.0) & (original description: Putative mot21, Description = Putative sugar phosphate/phosphate translocator, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf01521_459566-465033' '(at5g46110 : 470.0) mutant has Altered acclimation responses; Chloroplast Triose Phosphate Translocator; ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2 (APE2); FUNCTIONS IN: antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853), Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 2560 Blast hits to 2558 proteins in 418 species: Archae - 2; Bacteria - 316; Metazoa - 499; Fungi - 419; Plants - 1040; Viruses - 0; Other Eukaryotes - 284 (source: NCBI BLink). & (p29463|tpt_soltu : 466.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (E29) - Solanum tuberosum (Potato) & (gnl|cdd|36654 : 192.0) no description available & (gnl|cdd|66803 : 87.9) no description available & (reliability: 940.0) & (original description: Putative pt, Description = Triose phosphate/phosphate translocator, chloroplastic, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf01604_130640-135849' '(at3g10290 : 340.0) Nucleotide-sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT5G04160.1); Has 2900 Blast hits to 2898 proteins in 294 species: Archae - 4; Bacteria - 137; Metazoa - 666; Fungi - 435; Plants - 1330; Viruses - 0; Other Eukaryotes - 328 (source: NCBI BLink). & (gnl|cdd|36654 : 178.0) no description available & (gnl|cdd|66803 : 83.3) no description available & (reliability: 680.0) & (original description: Putative BnaA01g30900D, Description = BnaA01g30900D protein, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf01634_681010-686074' '(at3g10290 : 422.0) Nucleotide-sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT5G04160.1); Has 2900 Blast hits to 2898 proteins in 294 species: Archae - 4; Bacteria - 137; Metazoa - 666; Fungi - 435; Plants - 1330; Viruses - 0; Other Eukaryotes - 328 (source: NCBI BLink). & (gnl|cdd|36654 : 224.0) no description available & (gnl|cdd|66803 : 84.4) no description available & (reliability: 844.0) & (original description: Putative BnaC05g42810D, Description = BnaC05g42810D protein, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf01858_7331-10383' '(at2g25520 : 460.0) Drug/metabolite transporter superfamily protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT4G32390.1); Has 2445 Blast hits to 2439 proteins in 251 species: Archae - 0; Bacteria - 11; Metazoa - 512; Fungi - 442; Plants - 1237; Viruses - 0; Other Eukaryotes - 243 (source: NCBI BLink). & (gnl|cdd|36654 : 253.0) no description available & (gnl|cdd|66803 : 96.0) no description available & (reliability: 920.0) & (original description: Putative mot21, Description = Putative uncharacterized protein mot21, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf01926_66472-68595' '(at1g61800 : 169.0) glucose6-Phosphate/phosphate transporter 2; glucose-6-phosphate/phosphate translocator 2 (GPT2); FUNCTIONS IN: antiporter activity, glucose-6-phosphate transmembrane transporter activity; INVOLVED IN: in 7 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 2231 Blast hits to 2230 proteins in 287 species: Archae - 2; Bacteria - 36; Metazoa - 463; Fungi - 366; Plants - 1109; Viruses - 0; Other Eukaryotes - 255 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative GPT, Description = Glucose-6-phosphate/phosphate translocator 1, chloroplastic, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf02077_883196-890049' '(at5g33320 : 448.0) Encodes a plastid inner envelope protein PPT (phosphoenolpyruvate/phosphate translocator) that catalyzes the transport of phosphoenolpyruvate and phosphate across the inner envelope membrane of plastids.; CAB UNDEREXPRESSED 1 (CUE1); FUNCTIONS IN: antiporter activity; INVOLVED IN: transport; LOCATED IN: mitochondrion, chloroplast, plastid, plastid inner membrane, chloroplast envelope; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate (pep)/phosphate translocator 2 (TAIR:AT3G01550.1); Has 2791 Blast hits to 2789 proteins in 409 species: Archae - 9; Bacteria - 295; Metazoa - 571; Fungi - 421; Plants - 1194; Viruses - 0; Other Eukaryotes - 301 (source: NCBI BLink). & (gnl|cdd|36654 : 232.0) no description available & (p21727|tpt_pea : 206.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (p36) (E30) - Pisum sativum (Garden pea) & (gnl|cdd|66803 : 123.0) no description available & (reliability: 896.0) & (original description: Putative PPT2, Description = Phosphoenolpyruvate/phosphate translocator 2, chloroplastic, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf02877_508172-521714' '(at1g06470 : 481.0) Nucleotide/sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT5G25400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36656 : 223.0) no description available & (gnl|cdd|66803 : 122.0) no description available & (reliability: 962.0) & (original description: Putative At1g06470, Description = Probable sugar phosphate/phosphate translocator At1g06470, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf02877_508403-513839' '(at1g06470 : 144.0) Nucleotide/sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT5G25400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative At1g06470, Description = Solute carrier family 35 member C2, PFAM = )' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf03116_491258-499371' '(at3g17430 : 546.0) Nucleotide-sugar transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G48230.1); Has 2225 Blast hits to 2218 proteins in 235 species: Archae - 0; Bacteria - 16; Metazoa - 439; Fungi - 391; Plants - 1151; Viruses - 0; Other Eukaryotes - 228 (source: NCBI BLink). & (gnl|cdd|36654 : 244.0) no description available & (gnl|cdd|66803 : 94.5) no description available & (reliability: 1092.0) & (original description: Putative mot21, Description = Putative sugar phosphate/phosphate translocator, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf03427_499967-506870' '(p29463|tpt_soltu : 653.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (E29) - Solanum tuberosum (Potato) & (at5g46110 : 602.0) mutant has Altered acclimation responses; Chloroplast Triose Phosphate Translocator; ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2 (APE2); FUNCTIONS IN: antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853), Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 2560 Blast hits to 2558 proteins in 418 species: Archae - 2; Bacteria - 316; Metazoa - 499; Fungi - 419; Plants - 1040; Viruses - 0; Other Eukaryotes - 284 (source: NCBI BLink). & (gnl|cdd|36654 : 220.0) no description available & (gnl|cdd|66803 : 106.0) no description available & (reliability: 1204.0) & (original description: Putative TPT, Description = Triose phosphate/phosphate translocator, chloroplastic, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf03779_694835-700088' '(at3g11320 : 449.0) Nucleotide-sugar transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT5G05820.1); Has 3089 Blast hits to 3084 proteins in 315 species: Archae - 10; Bacteria - 135; Metazoa - 742; Fungi - 470; Plants - 1357; Viruses - 0; Other Eukaryotes - 375 (source: NCBI BLink). & (gnl|cdd|36654 : 221.0) no description available & (gnl|cdd|66803 : 87.1) no description available & (reliability: 898.0) & (original description: Putative At3g11320, Description = Probable sugar phosphate/phosphate translocator At3g11320, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf04011_1101866-1105784' '(at1g61800 : 373.0) glucose6-Phosphate/phosphate transporter 2; glucose-6-phosphate/phosphate translocator 2 (GPT2); FUNCTIONS IN: antiporter activity, glucose-6-phosphate transmembrane transporter activity; INVOLVED IN: in 7 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 2231 Blast hits to 2230 proteins in 287 species: Archae - 2; Bacteria - 36; Metazoa - 463; Fungi - 366; Plants - 1109; Viruses - 0; Other Eukaryotes - 255 (source: NCBI BLink). & (gnl|cdd|36654 : 204.0) no description available & (p11869|tpt_spiol : 165.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (p36) (E29) - Spinacia oleracea (Spinach) & (gnl|cdd|66803 : 117.0) no description available & (reliability: 746.0) & (original description: Putative GPT, Description = Putative Glu-6-Phosphate translocator, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf04093_16600-22073' '(at3g11320 : 478.0) Nucleotide-sugar transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT5G05820.1); Has 3089 Blast hits to 3084 proteins in 315 species: Archae - 10; Bacteria - 135; Metazoa - 742; Fungi - 470; Plants - 1357; Viruses - 0; Other Eukaryotes - 375 (source: NCBI BLink). & (gnl|cdd|36654 : 235.0) no description available & (gnl|cdd|66803 : 90.6) no description available & (reliability: 956.0) & (original description: Putative At3g11320, Description = Probable sugar phosphate/phosphate translocator At3g11320, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf04174_319815-326040' '(at3g14410 : 417.0) Nucleotide/sugar transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G53660.1); Has 2316 Blast hits to 2309 proteins in 275 species: Archae - 4; Bacteria - 65; Metazoa - 512; Fungi - 392; Plants - 1095; Viruses - 0; Other Eukaryotes - 248 (source: NCBI BLink). & (gnl|cdd|36654 : 228.0) no description available & (gnl|cdd|66803 : 99.5) no description available & (reliability: 834.0) & (original description: Putative mot21, Description = Putative sugar phosphate/phosphate translocator, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf05017_442863-448179' '(at3g11320 : 474.0) Nucleotide-sugar transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT5G05820.1); Has 3089 Blast hits to 3084 proteins in 315 species: Archae - 10; Bacteria - 135; Metazoa - 742; Fungi - 470; Plants - 1357; Viruses - 0; Other Eukaryotes - 375 (source: NCBI BLink). & (gnl|cdd|36654 : 228.0) no description available & (gnl|cdd|66803 : 89.5) no description available & (reliability: 948.0) & (original description: Putative At3g11320, Description = Probable sugar phosphate/phosphate translocator At3g11320, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf05304_523560-532364' '(at1g77610 : 400.0) EamA-like transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: golgi nucleotide sugar transporter 5 (TAIR:AT1G21870.1); Has 3475 Blast hits to 3470 proteins in 365 species: Archae - 2; Bacteria - 169; Metazoa - 728; Fungi - 565; Plants - 1539; Viruses - 0; Other Eukaryotes - 472 (source: NCBI BLink). & (gnl|cdd|36654 : 201.0) no description available & (reliability: 800.0) & (original description: Putative GONST5, Description = UDP-galactose transporter 1, PFAM = PF03151;PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf05348_58022-61089' '(at1g12500 : 427.0) Nucleotide-sugar transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT3G11320.1); Has 2763 Blast hits to 2761 proteins in 260 species: Archae - 6; Bacteria - 37; Metazoa - 632; Fungi - 440; Plants - 1334; Viruses - 0; Other Eukaryotes - 314 (source: NCBI BLink). & (gnl|cdd|36654 : 243.0) no description available & (gnl|cdd|66803 : 96.4) no description available & (reliability: 854.0) & (original description: Putative At1g12500, Description = Probable sugar phosphate/phosphate translocator At1g12500, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf06442_58030-64603' '(at3g01550 : 385.0) phosphoenolpyruvate (pep)/phosphate translocator 2 (PPT2); FUNCTIONS IN: antiporter activity; INVOLVED IN: transport; LOCATED IN: integral to membrane, chloroplast, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Glucose-6-phosphate/phosphate translocator-related (TAIR:AT5G33320.1); Has 2511 Blast hits to 2510 proteins in 289 species: Archae - 8; Bacteria - 55; Metazoa - 551; Fungi - 395; Plants - 1226; Viruses - 0; Other Eukaryotes - 276 (source: NCBI BLink). & (gnl|cdd|36654 : 235.0) no description available & (p29463|tpt_soltu : 162.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (E29) - Solanum tuberosum (Potato) & (gnl|cdd|66803 : 116.0) no description available & (reliability: 770.0) & (original description: Putative PPT2, Description = Phosphoenolpyruvate/phosphate translocator 2, chloroplastic, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf07194_24304-29833' '(at5g54800 : 474.0) Encodes glucose6-Phosphate/phosphate transporter 1. Essential for pollen maturation and embryo sac development.; glucose 6-phosphate/phosphate translocator 1 (GPT1); FUNCTIONS IN: antiporter activity, glucose-6-phosphate transmembrane transporter activity; INVOLVED IN: vacuole organization, pollen maturation, embryo sac development, response to nematode, lipid particle organization; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: glucose-6-phosphate/phosphate translocator 2 (TAIR:AT1G61800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36654 : 258.0) no description available & (p11869|tpt_spiol : 227.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (p36) (E29) - Spinacia oleracea (Spinach) & (gnl|cdd|66803 : 119.0) no description available & (reliability: 948.0) & (original description: Putative GPT1, Description = Glucose-6-phosphate/phosphate translocator 1, chloroplastic, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf08844_64349-68783' '(p25083|adt1_soltu : 577.0) ADP,ATP carrier protein, mitochondrial precursor (ADP/ATP translocase) (Adenine nucleotide translocator) (ANT) - Solanum tuberosum (Potato) & (at5g13490 : 545.0) Encodes mitochondrial ADP/ATP carrier; ADP/ATP carrier 2 (AAC2); FUNCTIONS IN: protein binding, binding, copper ion binding, ATP:ADP antiporter activity; INVOLVED IN: transport, purine nucleotide transport; LOCATED IN: mitochondrial envelope, mitochondrion, mitochondrial inner membrane, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 1 (TAIR:AT3G08580.2); Has 20201 Blast hits to 12470 proteins in 482 species: Archae - 0; Bacteria - 0; Metazoa - 9190; Fungi - 5149; Plants - 3866; Viruses - 0; Other Eukaryotes - 1996 (source: NCBI BLink). & (gnl|cdd|35968 : 435.0) no description available & (gnl|cdd|84566 : 91.9) no description available & (reliability: 1078.0) & (original description: Putative ANT, Description = ADP,ATP carrier protein, mitochondrial, PFAM = PF00153;PF00153;PF00153)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf10616_60516-71668' '(at3g17430 : 552.0) Nucleotide-sugar transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G48230.1); Has 2225 Blast hits to 2218 proteins in 235 species: Archae - 0; Bacteria - 16; Metazoa - 439; Fungi - 391; Plants - 1151; Viruses - 0; Other Eukaryotes - 228 (source: NCBI BLink). & (gnl|cdd|36654 : 244.0) no description available & (gnl|cdd|66803 : 94.5) no description available & (reliability: 1104.0) & (original description: Putative mot21, Description = Putative sugar phosphate/phosphate translocator, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf11084_60309-65285' '(at3g10290 : 439.0) Nucleotide-sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT5G04160.1); Has 2900 Blast hits to 2898 proteins in 294 species: Archae - 4; Bacteria - 137; Metazoa - 666; Fungi - 435; Plants - 1330; Viruses - 0; Other Eukaryotes - 328 (source: NCBI BLink). & (gnl|cdd|36654 : 225.0) no description available & (gnl|cdd|66803 : 82.9) no description available & (reliability: 878.0) & (original description: Putative At5g04160, Description = Probable sugar phosphate/phosphate translocator At5g04160, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf15366_118101-121986' '(at1g61800 : 450.0) glucose6-Phosphate/phosphate transporter 2; glucose-6-phosphate/phosphate translocator 2 (GPT2); FUNCTIONS IN: antiporter activity, glucose-6-phosphate transmembrane transporter activity; INVOLVED IN: in 7 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 2231 Blast hits to 2230 proteins in 287 species: Archae - 2; Bacteria - 36; Metazoa - 463; Fungi - 366; Plants - 1109; Viruses - 0; Other Eukaryotes - 255 (source: NCBI BLink). & (gnl|cdd|36654 : 249.0) no description available & (p21727|tpt_pea : 202.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (p36) (E30) - Pisum sativum (Garden pea) & (gnl|cdd|66803 : 112.0) no description available & (reliability: 900.0) & (original description: Putative GPT2, Description = Glucose-6-phosphate/phosphate translocator 2, chloroplastic, PFAM = PF03151)' T '34.8' 'transport.metabolite transporters at the envelope membrane' 'niben101scf15995_470386-476685' '(at5g17520 : 341.0) Encodes a maltose transporter that is expressed in leaves and roots. Mutations at the MEX1 locus cause accumulation of both starch and maltose in leaves, with maltose levels at least 40 times higher than that of wild-type. This gene encodes a protein located in the chloroplast envelope.; ROOT CAP 1 (RCP1); FUNCTIONS IN: maltose transmembrane transporter activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17523.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7xtq5|mex1_orysa : 339.0) Maltose excess protein 1-like, chloroplast precursor - Oryza sativa (Rice) & (reliability: 682.0) & (original description: Putative MEX1, Description = Maltose excess protein 1, chloroplastic, PFAM = )' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.3scaffold784_87904-110378' '(at4g27940 : 407.0) manganese tracking factor for mitochondrial SOD2 (MTM1); FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT2G46320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35980 : 358.0) no description available & (reliability: 814.0) & (original description: Putative mc1, Description = Predicted protein, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.3scaffold12385_26128-30674' '(at5g14040 : 491.0) phosphate transporter 3;1 (PHT3;1); FUNCTIONS IN: binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: phosphate transporter 3;2 (TAIR:AT3G48850.1); Has 17134 Blast hits to 11746 proteins in 429 species: Archae - 0; Bacteria - 0; Metazoa - 7375; Fungi - 4841; Plants - 3332; Viruses - 3; Other Eukaryotes - 1583 (source: NCBI BLink). & (gnl|cdd|35986 : 477.0) no description available & (reliability: 982.0) & (original description: Putative mpt, Description = Mitochondrial phosphate translocator, PFAM = PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.3scaffold12842_5205-11101' '(at5g64290 : 646.0) dicarboxylate transport 2.1 (DIT2.1); FUNCTIONS IN: oxoglutarate:malate antiporter activity; INVOLVED IN: malate transport, response to nematode; LOCATED IN: chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sodium/sulphate symporter (InterPro:IPR001898); BEST Arabidopsis thaliana protein match is: dicarboxylate transporter 2.2 (TAIR:AT5G64280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85137 : 398.0) no description available & (q41364|sot1_spiol : 354.0) 2-oxoglutarate/malate translocator, chloroplast precursor - Spinacia oleracea (Spinach) & (reliability: 1292.0) & (original description: Putative citT, Description = 2-oxoglutarate translocator, PFAM = PF00939)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.3scaffold13583_1-9446' '(at5g66380 : 407.0) Encodes a folate transporter that is located in the chloroplast envelope and is able to mediate exogenous folate uptake when expressed in E. coli. However, this is not the sole folate transporter for chloroplasts as null mutants of this gene have no discernible phenotype when grown under folate-sufficient conditions and contained wild-type levels of folates in leaves.; folate transporter 1 (FOLT1); CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: NAD+ transporter 2 (TAIR:AT1G25380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35983 : 323.0) no description available & (gnl|cdd|84566 : 88.4) no description available & (p29518|bt1_maize : 88.2) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 814.0) & (original description: Putative FOLT1, Description = Folate transporter 1, chloroplastic, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.3scaffold18156_1-8081' '(at4g01100 : 479.0) adenine nucleotide transporter 1 (ADNT1); CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G51050.1). & (gnl|cdd|35971 : 312.0) no description available & (p29518|bt1_maize : 147.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 103.0) no description available & (reliability: 958.0) & (original description: Putative mcfB, Description = Mitochondrial carrier protein, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.3scaffold24467_16638-25329' '(at1g14560 : 423.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: endomembrane system, mitochondrial inner membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Graves disease carrier protein (InterPro:IPR002167); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT4G26180.1); Has 25798 Blast hits to 13799 proteins in 460 species: Archae - 0; Bacteria - 2; Metazoa - 10868; Fungi - 7493; Plants - 4688; Viruses - 0; Other Eukaryotes - 2747 (source: NCBI BLink). & (gnl|cdd|35971 : 302.0) no description available & (p29518|bt1_maize : 124.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 84.2) no description available & (reliability: 846.0) & (original description: Putative At1g14560, Description = Mitochondrial substrate carrier family protein, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.3scaffold27125_24257-27206' '(at1g72820 : 421.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G26200.1); Has 20856 Blast hits to 12399 proteins in 415 species: Archae - 0; Bacteria - 0; Metazoa - 8678; Fungi - 5994; Plants - 4095; Viruses - 0; Other Eukaryotes - 2089 (source: NCBI BLink). & (gnl|cdd|35984 : 358.0) no description available & (reliability: 842.0) & (original description: Putative ORF36, Description = Mitochondrial carrier protein, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.3scaffold34069_484-10274' '(at2g47490 : 452.0) Encodes a chloroplast-localized NAD+ transporter that transports NAD+ in a counter exchange mode with ADP and AMP in vitro.; NAD+ transporter 1 (NDT1); CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: NAD+ transporter 2 (TAIR:AT1G25380.1); Has 28896 Blast hits to 14510 proteins in 466 species: Archae - 0; Bacteria - 6; Metazoa - 12245; Fungi - 8541; Plants - 5076; Viruses - 8; Other Eukaryotes - 3020 (source: NCBI BLink). & (gnl|cdd|35983 : 347.0) no description available & (gnl|cdd|84566 : 93.8) no description available & (p29518|bt1_maize : 90.5) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 904.0) & (original description: Putative NDT1, Description = Nicotinamide adenine dinucleotide transporter 1, chloroplastic, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.3scaffold35781_6766-9919' '(at5g46800 : 407.0) Seedling lethal mutation; Mitochondrial Carnitine Acyl Carrier-Like Protein; A BOUT DE SOUFFLE (BOU); FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, ornithine transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, chloroplast, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT2G33820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35977 : 304.0) no description available & (reliability: 814.0) & (original description: Putative BOU, Description = Mitochondrial carnitine/acylcarnitine carrier-like protein, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.3scaffold37994_6846-12882' '(at5g19760 : 130.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: oxidative phosphorylation uncoupler activity, binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: dicarboxylate carrier 2 (TAIR:AT4G24570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative , Description = , PFAM = PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.3scaffold54685_4405-13549' '(at4g39460 : 446.0) Encodes a plastid metabolite transporter required for the import of S-Adenosylmethionine from the cytosol. Impaired function of SAMT1 led to decreased accumulation of prenyllipids and mainly affected the chlorophyll pathway.; S-adenosylmethionine carrier 1 (SAMC1); CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 2 (TAIR:AT1G34065.1). & (gnl|cdd|35987 : 326.0) no description available & (gnl|cdd|84566 : 82.6) no description available & (reliability: 892.0) & (original description: Putative SAMC1, Description = S-adenosylmethionine carrier 1, chloroplastic/mitochondrial, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.3scaffold72119_1434-6497' '(at5g14040 : 485.0) phosphate transporter 3;1 (PHT3;1); FUNCTIONS IN: binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: phosphate transporter 3;2 (TAIR:AT3G48850.1); Has 17134 Blast hits to 11746 proteins in 429 species: Archae - 0; Bacteria - 0; Metazoa - 7375; Fungi - 4841; Plants - 3332; Viruses - 3; Other Eukaryotes - 1583 (source: NCBI BLink). & (gnl|cdd|35986 : 470.0) no description available & (reliability: 970.0) & (original description: Putative MPT2, Description = Mitochondrial phosphate carrier protein 2, mitochondrial, PFAM = PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.3scaffold78479_1-6531' '(at5g51050 : 738.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, calcium ion binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Mitochondrial substrate carrier (InterPro:IPR001993), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Mitochondrial carrier protein (InterPro:IPR002067), EF-HAND 2 (InterPro:IPR018249), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G07320.1); Has 35093 Blast hits to 20803 proteins in 1083 species: Archae - 0; Bacteria - 15; Metazoa - 13922; Fungi - 9690; Plants - 7280; Viruses - 2; Other Eukaryotes - 4184 (source: NCBI BLink). & (gnl|cdd|35259 : 644.0) no description available & (p29518|bt1_maize : 140.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 96.1) no description available & (reliability: 1476.0) & (original description: Putative slc25a24, Description = Calcium-binding mitochondrial carrier protein SCaMC-1, PFAM = PF00153;PF00153;PF00153;PF13499;PF13499)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.3scaffold101340_1653-3874' '(at5g51050 : 226.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, calcium ion binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Mitochondrial substrate carrier (InterPro:IPR001993), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Mitochondrial carrier protein (InterPro:IPR002067), EF-HAND 2 (InterPro:IPR018249), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G07320.1); Has 35093 Blast hits to 20803 proteins in 1083 species: Archae - 0; Bacteria - 15; Metazoa - 13922; Fungi - 9690; Plants - 7280; Viruses - 2; Other Eukaryotes - 4184 (source: NCBI BLink). & (gnl|cdd|35259 : 143.0) no description available & (reliability: 452.0) & (original description: Putative pco141217, Description = Calcium-binding mitochondrial carrier protein SCaMC-1, PFAM = PF00036)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.5scaffold530_613174-617622' '(at4g03115 : 335.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: plant uncoupling mitochondrial protein 1 (TAIR:AT3G54110.1); Has 24483 Blast hits to 13698 proteins in 441 species: Archae - 0; Bacteria - 0; Metazoa - 9864; Fungi - 7121; Plants - 4898; Viruses - 3; Other Eukaryotes - 2597 (source: NCBI BLink). & (gnl|cdd|35972 : 191.0) no description available & (reliability: 670.0) & (original description: Putative At4g03115, Description = Mitochondrial substrate carrier family protein, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.5scaffold662_583161-585979' '(at1g14140 : 132.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: transporter activity, binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: uncoupling protein 2 (TAIR:AT5G58970.1); Has 28913 Blast hits to 14062 proteins in 461 species: Archae - 0; Bacteria - 4; Metazoa - 12057; Fungi - 8822; Plants - 5230; Viruses - 3; Other Eukaryotes - 2797 (source: NCBI BLink). & (gnl|cdd|35972 : 112.0) no description available & (reliability: 264.0) & (original description: Putative ucp3, Description = Uncoupling protein 3, PFAM = PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.5scaffold1476_10233-16743' '(at5g19760 : 125.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: oxidative phosphorylation uncoupler activity, binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: dicarboxylate carrier 2 (TAIR:AT4G24570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative , Description = , PFAM = PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.5scaffold2100_92257-146086' '(at5g24030 : 171.0) Encodes a protein with ten predicted transmembrane helices. The SLAH3 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement an slac1-2 mutant suggesting that it performs a similar function. SLAH3:GFP localizes to the plasma membrane.; SLAC1 homologue 3 (SLAH3); FUNCTIONS IN: transporter activity; INVOLVED IN: cellular ion homeostasis; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C4-dicarboxylate transporter/malic acid transport protein (InterPro:IPR004695); BEST Arabidopsis thaliana protein match is: SLAC1 homologue 2 (TAIR:AT4G27970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative slah1, Description = S-type anion channel SLAH2, PFAM = PF03595)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.5scaffold2100_143094-145002' '(at5g24030 : 219.0) Encodes a protein with ten predicted transmembrane helices. The SLAH3 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement an slac1-2 mutant suggesting that it performs a similar function. SLAH3:GFP localizes to the plasma membrane.; SLAC1 homologue 3 (SLAH3); FUNCTIONS IN: transporter activity; INVOLVED IN: cellular ion homeostasis; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C4-dicarboxylate transporter/malic acid transport protein (InterPro:IPR004695); BEST Arabidopsis thaliana protein match is: SLAC1 homologue 2 (TAIR:AT4G27970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative SLAC1, Description = C4-dicarboxylate transporter/malic acid transport protein, PFAM = PF03595;PF03595)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.5scaffold2100_145003-147326' '(at5g24030 : 235.0) Encodes a protein with ten predicted transmembrane helices. The SLAH3 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement an slac1-2 mutant suggesting that it performs a similar function. SLAH3:GFP localizes to the plasma membrane.; SLAC1 homologue 3 (SLAH3); FUNCTIONS IN: transporter activity; INVOLVED IN: cellular ion homeostasis; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C4-dicarboxylate transporter/malic acid transport protein (InterPro:IPR004695); BEST Arabidopsis thaliana protein match is: SLAC1 homologue 2 (TAIR:AT4G27970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86376 : 84.2) no description available & (reliability: 470.0) & (original description: Putative CDI3, Description = S-type anion channel SLAH2, PFAM = PF03595)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.5scaffold2848_261682-266745' '(at5g14040 : 475.0) phosphate transporter 3;1 (PHT3;1); FUNCTIONS IN: binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: phosphate transporter 3;2 (TAIR:AT3G48850.1); Has 17134 Blast hits to 11746 proteins in 429 species: Archae - 0; Bacteria - 0; Metazoa - 7375; Fungi - 4841; Plants - 3332; Viruses - 3; Other Eukaryotes - 1583 (source: NCBI BLink). & (gnl|cdd|35986 : 470.0) no description available & (reliability: 950.0) & (original description: Putative PIC2, Description = PIC2 protein, PFAM = PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.5scaffold2941_206080-219455' '(at1g55900 : 347.0) component of a translocase in the mitochondrial inner membrane; TIM50; CONTAINS InterPro DOMAIN/s: NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G29780.1). & (gnl|cdd|38043 : 256.0) no description available & (gnl|cdd|47876 : 129.0) no description available & (reliability: 694.0) & (original description: Putative TIM50, Description = Mitochondrial import inner membrane translocase subunit TIM50, PFAM = PF03031)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.5scaffold3372_247538-254132' '(at5g19760 : 478.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: oxidative phosphorylation uncoupler activity, binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: dicarboxylate carrier 2 (TAIR:AT4G24570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35978 : 324.0) no description available & (reliability: 956.0) & (original description: Putative dtc, Description = Dicarboxylate/tricarboxylate carrier, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.5scaffold4388_72662-80270' '(at3g53940 : 436.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT2G37890.1); Has 31235 Blast hits to 14563 proteins in 465 species: Archae - 0; Bacteria - 2; Metazoa - 13401; Fungi - 9616; Plants - 4899; Viruses - 2; Other Eukaryotes - 3315 (source: NCBI BLink). & (gnl|cdd|35971 : 320.0) no description available & (p29518|bt1_maize : 122.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 91.1) no description available & (reliability: 872.0) & (original description: Putative mcfB, Description = Mitochondrial substrate carrier family protein B, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.5scaffold4796_80052-92967' '(at4g27940 : 383.0) manganese tracking factor for mitochondrial SOD2 (MTM1); FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT2G46320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35980 : 330.0) no description available & (reliability: 766.0) & (original description: Putative mc1, Description = Mitochondrial substrate carrier family protein, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.5scaffold5161_84434-89550' '(at4g28390 : 530.0) Encodes a mitochondrial ADP/ATP carrier protein. Shown in heterologous systems to be located in the plasma membrane. Has comparable affinity for ADP and ATP (in E.coli).; ADP/ATP carrier 3 (AAC3); FUNCTIONS IN: binding, ATP:ADP antiporter activity; INVOLVED IN: transport, mitochondrial transport, purine nucleotide transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 2 (TAIR:AT5G13490.2); Has 20286 Blast hits to 12392 proteins in 480 species: Archae - 0; Bacteria - 0; Metazoa - 9416; Fungi - 5054; Plants - 3787; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (p04709|adt1_maize : 510.0) ADP,ATP carrier protein 1, mitochondrial precursor (ADP/ATP translocase 1) (Adenine nucleotide translocator 1) (ANT 1) - Zea mays (Maize) & (gnl|cdd|35968 : 433.0) no description available & (gnl|cdd|84566 : 92.3) no description available & (reliability: 1060.0) & (original description: Putative AAC1, Description = ADP,ATP carrier protein 1, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.5scaffold5435_63312-77107' '(at5g51050 : 644.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, calcium ion binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Mitochondrial substrate carrier (InterPro:IPR001993), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Mitochondrial carrier protein (InterPro:IPR002067), EF-HAND 2 (InterPro:IPR018249), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G07320.1); Has 35093 Blast hits to 20803 proteins in 1083 species: Archae - 0; Bacteria - 15; Metazoa - 13922; Fungi - 9690; Plants - 7280; Viruses - 2; Other Eukaryotes - 4184 (source: NCBI BLink). & (gnl|cdd|35259 : 557.0) no description available & (p29518|bt1_maize : 109.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 89.2) no description available & (reliability: 1288.0) & (original description: Putative APC2, Description = Calcium-binding mitochondrial carrier protein SCaMC-1, PFAM = PF13499;PF13202;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'nbv0.5scaffold7136_33503-39356' '(at3g55640 : 281.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT3G53940.1); Has 29480 Blast hits to 14258 proteins in 460 species: Archae - 0; Bacteria - 2; Metazoa - 12173; Fungi - 9267; Plants - 4909; Viruses - 0; Other Eukaryotes - 3129 (source: NCBI BLink). & (gnl|cdd|35971 : 217.0) no description available & (p29518|bt1_maize : 91.3) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 90.7) no description available & (reliability: 562.0) & (original description: Putative mcfB, Description = Mitochondrial substrate carrier family protein B, PFAM = PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben044scf00000177ctg023_19844-24387' '(at5g14040 : 492.0) phosphate transporter 3;1 (PHT3;1); FUNCTIONS IN: binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: phosphate transporter 3;2 (TAIR:AT3G48850.1); Has 17134 Blast hits to 11746 proteins in 429 species: Archae - 0; Bacteria - 0; Metazoa - 7375; Fungi - 4841; Plants - 3332; Viruses - 3; Other Eukaryotes - 1583 (source: NCBI BLink). & (gnl|cdd|35986 : 477.0) no description available & (gnl|cdd|84566 : 80.3) no description available & (reliability: 984.0) & (original description: Putative mpt, Description = Mitochondrial phosphate translocator, PFAM = PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben044scf00004264ctg010_26-9103' '(at5g51050 : 636.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, calcium ion binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Mitochondrial substrate carrier (InterPro:IPR001993), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Mitochondrial carrier protein (InterPro:IPR002067), EF-HAND 2 (InterPro:IPR018249), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G07320.1); Has 35093 Blast hits to 20803 proteins in 1083 species: Archae - 0; Bacteria - 15; Metazoa - 13922; Fungi - 9690; Plants - 7280; Viruses - 2; Other Eukaryotes - 4184 (source: NCBI BLink). & (gnl|cdd|35259 : 556.0) no description available & (p29518|bt1_maize : 107.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 90.0) no description available & (reliability: 1272.0) & (original description: Putative APC2, Description = Calcium-binding mitochondrial carrier protein SCaMC-1, PFAM = PF13202;PF13499;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben044scf00004312ctg005_1817-7572' '(at1g14140 : 396.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: transporter activity, binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: uncoupling protein 2 (TAIR:AT5G58970.1); Has 28913 Blast hits to 14062 proteins in 461 species: Archae - 0; Bacteria - 4; Metazoa - 12057; Fungi - 8822; Plants - 5230; Viruses - 3; Other Eukaryotes - 2797 (source: NCBI BLink). & (gnl|cdd|35972 : 353.0) no description available & (gnl|cdd|84566 : 86.9) no description available & (reliability: 792.0) & (original description: Putative ucp3, Description = Uncoupling protein 3, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben044scf00011579ctg003_190-3999' '(at4g39460 : 150.0) Encodes a plastid metabolite transporter required for the import of S-Adenosylmethionine from the cytosol. Impaired function of SAMT1 led to decreased accumulation of prenyllipids and mainly affected the chlorophyll pathway.; S-adenosylmethionine carrier 1 (SAMC1); CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 2 (TAIR:AT1G34065.1). & (gnl|cdd|35987 : 105.0) no description available & (reliability: 300.0) & (original description: Putative Os05g0361900, Description = Os05g0361900 protein, PFAM = PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben044scf00012648ctg008_15972-21918' '(at5g14040 : 506.0) phosphate transporter 3;1 (PHT3;1); FUNCTIONS IN: binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: phosphate transporter 3;2 (TAIR:AT3G48850.1); Has 17134 Blast hits to 11746 proteins in 429 species: Archae - 0; Bacteria - 0; Metazoa - 7375; Fungi - 4841; Plants - 3332; Viruses - 3; Other Eukaryotes - 1583 (source: NCBI BLink). & (gnl|cdd|35986 : 485.0) no description available & (gnl|cdd|84566 : 81.5) no description available & (reliability: 1012.0) & (original description: Putative MPT3, Description = Mitochondrial phosphate carrier protein 3, mitochondrial, PFAM = PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben044scf00013170ctg001_8-21046' '(at4g27940 : 278.0) manganese tracking factor for mitochondrial SOD2 (MTM1); FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT2G46320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35980 : 269.0) no description available & (reliability: 556.0) & (original description: Putative mc1, Description = Mitochondrial substrate carrier family protein, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben044scf00015414ctg019_8810-13911' '(o24381|tlc1_soltu : 1015.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (at1g80300 : 854.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (gnl|cdd|66864 : 649.0) no description available & (reliability: 1676.0) & (original description: Putative npt, Description = ADP,ATP carrier protein 1, PFAM = PF03219)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben044scf00018376ctg003_7453-12074' '(at1g62280 : 302.0) Encodes a protein with ten predicted transmembrane helices. The SLAH1 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement a slac1-2 mutant suggesting that it performs a similar function. SLAH1:GFP localizes to the plasma membrane.; SLAC1 homologue 1 (SLAH1); CONTAINS InterPro DOMAIN/s: C4-dicarboxylate transporter/malic acid transport protein (InterPro:IPR004695); BEST Arabidopsis thaliana protein match is: SLAC1 homologue 4 (TAIR:AT1G62262.1); Has 719 Blast hits to 716 proteins in 282 species: Archae - 2; Bacteria - 524; Metazoa - 0; Fungi - 6; Plants - 154; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|86376 : 130.0) no description available & (reliability: 604.0) & (original description: Putative SLAH1, Description = S-type anion channel SLAH1, PFAM = PF03595)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben044scf00018594ctg009_3266-6248' '(at5g66380 : 90.9) Encodes a folate transporter that is located in the chloroplast envelope and is able to mediate exogenous folate uptake when expressed in E. coli. However, this is not the sole folate transporter for chloroplasts as null mutants of this gene have no discernible phenotype when grown under folate-sufficient conditions and contained wild-type levels of folates in leaves.; folate transporter 1 (FOLT1); CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: NAD+ transporter 2 (TAIR:AT1G25380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative FOLT1, Description = Folate transporter 1, chloroplastic, PFAM = PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben044scf00018659ctg001_6585-16185' '(at5g19760 : 477.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: oxidative phosphorylation uncoupler activity, binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: dicarboxylate carrier 2 (TAIR:AT4G24570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35978 : 323.0) no description available & (reliability: 954.0) & (original description: Putative dtc, Description = Dicarboxylate/tricarboxylate carrier, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben044scf00019101ctg002_13566-17872' '(at4g28390 : 505.0) Encodes a mitochondrial ADP/ATP carrier protein. Shown in heterologous systems to be located in the plasma membrane. Has comparable affinity for ADP and ATP (in E.coli).; ADP/ATP carrier 3 (AAC3); FUNCTIONS IN: binding, ATP:ADP antiporter activity; INVOLVED IN: transport, mitochondrial transport, purine nucleotide transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 2 (TAIR:AT5G13490.2); Has 20286 Blast hits to 12392 proteins in 480 species: Archae - 0; Bacteria - 0; Metazoa - 9416; Fungi - 5054; Plants - 3787; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (p25083|adt1_soltu : 492.0) ADP,ATP carrier protein, mitochondrial precursor (ADP/ATP translocase) (Adenine nucleotide translocator) (ANT) - Solanum tuberosum (Potato) & (gnl|cdd|35968 : 430.0) no description available & (gnl|cdd|84566 : 91.5) no description available & (reliability: 1010.0) & (original description: Putative AAC3, Description = ADP,ATP carrier protein 3, mitochondrial, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben044scf00020970ctg005_3156-10279' '(at5g64290 : 667.0) dicarboxylate transport 2.1 (DIT2.1); FUNCTIONS IN: oxoglutarate:malate antiporter activity; INVOLVED IN: malate transport, response to nematode; LOCATED IN: chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sodium/sulphate symporter (InterPro:IPR001898); BEST Arabidopsis thaliana protein match is: dicarboxylate transporter 2.2 (TAIR:AT5G64280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85137 : 397.0) no description available & (q41364|sot1_spiol : 371.0) 2-oxoglutarate/malate translocator, chloroplast precursor - Spinacia oleracea (Spinach) & (reliability: 1334.0) & (original description: Putative citT, Description = 2-oxoglutarate translocator, PFAM = PF00939)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben044scf00028393ctg006_18291-20295' '(at4g28390 : 154.0) Encodes a mitochondrial ADP/ATP carrier protein. Shown in heterologous systems to be located in the plasma membrane. Has comparable affinity for ADP and ATP (in E.coli).; ADP/ATP carrier 3 (AAC3); FUNCTIONS IN: binding, ATP:ADP antiporter activity; INVOLVED IN: transport, mitochondrial transport, purine nucleotide transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 2 (TAIR:AT5G13490.2); Has 20286 Blast hits to 12392 proteins in 480 species: Archae - 0; Bacteria - 0; Metazoa - 9416; Fungi - 5054; Plants - 3787; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (p27081|adt2_soltu : 142.0) ADP,ATP carrier protein, mitochondrial precursor (ADP/ATP translocase) (Adenine nucleotide translocator) (ANT) (Fragment) - Solanum tuberosum (Potato) & (gnl|cdd|35968 : 123.0) no description available & (reliability: 308.0) & (original description: Putative aac, Description = ADP,ATP carrier protein, PFAM = PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben044scf00031192ctg003_888-6319' '(at5g24030 : 598.0) Encodes a protein with ten predicted transmembrane helices. The SLAH3 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement an slac1-2 mutant suggesting that it performs a similar function. SLAH3:GFP localizes to the plasma membrane.; SLAC1 homologue 3 (SLAH3); FUNCTIONS IN: transporter activity; INVOLVED IN: cellular ion homeostasis; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C4-dicarboxylate transporter/malic acid transport protein (InterPro:IPR004695); BEST Arabidopsis thaliana protein match is: SLAC1 homologue 2 (TAIR:AT4G27970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86376 : 206.0) no description available & (reliability: 1196.0) & (original description: Putative SLAH3, Description = S-type anion channel SLAH3, PFAM = PF03595)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben044scf00032537ctg002_91-9468' '(at4g17550 : 684.0) Major facilitator superfamily protein; FUNCTIONS IN: sugar:hydrogen symporter activity; INVOLVED IN: carbohydrate transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate starvation-induced gene 3 (TAIR:AT3G47420.1); Has 16541 Blast hits to 16470 proteins in 1914 species: Archae - 148; Bacteria - 14105; Metazoa - 649; Fungi - 878; Plants - 215; Viruses - 0; Other Eukaryotes - 546 (source: NCBI BLink). & (gnl|cdd|37744 : 319.0) no description available & (gnl|cdd|32452 : 161.0) no description available & (reliability: 1368.0) & (original description: Putative At2g13100, Description = Putative glycerol-3-phosphate transporter 5, PFAM = PF07690)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben044scf00039292ctg004_1-6440' '(at5g64970 : 384.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT1G78180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35971 : 200.0) no description available & (p29518|bt1_maize : 87.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 768.0) & (original description: Putative At1g78180, Description = Probable mitochondrial adenine nucleotide transporter BTL2, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben044scf00045338ctg005_1-3811' '(at4g11440 : 266.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: shoot apex, embryo, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 1 (TAIR:AT4G39460.2); Has 26651 Blast hits to 14053 proteins in 444 species: Archae - 0; Bacteria - 6; Metazoa - 11179; Fungi - 8014; Plants - 4538; Viruses - 0; Other Eukaryotes - 2914 (source: NCBI BLink). & (gnl|cdd|35987 : 148.0) no description available & (gnl|cdd|84566 : 93.4) no description available & (reliability: 532.0) & (original description: Putative mBAC6, Description = Mitochondrial carrier family, PFAM = PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben044scf00046658ctg000_539-5799' '(at1g07030 : 459.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT2G30160.1); Has 27351 Blast hits to 14015 proteins in 457 species: Archae - 0; Bacteria - 6; Metazoa - 11451; Fungi - 7735; Plants - 5292; Viruses - 0; Other Eukaryotes - 2867 (source: NCBI BLink). & (gnl|cdd|35979 : 362.0) no description available & (gnl|cdd|84566 : 93.8) no description available & (p29518|bt1_maize : 91.3) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 918.0) & (original description: Putative mcfF, Description = Mitoferrin, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben044scf00048614ctg000_1-4017' '(at4g26180 : 437.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT1G14560.1); Has 27152 Blast hits to 14144 proteins in 467 species: Archae - 0; Bacteria - 0; Metazoa - 12042; Fungi - 7753; Plants - 4485; Viruses - 3; Other Eukaryotes - 2869 (source: NCBI BLink). & (gnl|cdd|35971 : 303.0) no description available & (p29518|bt1_maize : 123.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 87.6) no description available & (reliability: 874.0) & (original description: Putative MTR_6g091800, Description = Grave disease carrier protein, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben044scf00052875ctg000_1-5632' '(at4g01100 : 494.0) adenine nucleotide transporter 1 (ADNT1); CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G51050.1). & (gnl|cdd|35971 : 299.0) no description available & (p29518|bt1_maize : 138.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 103.0) no description available & (reliability: 988.0) & (original description: Putative mcfB, Description = Mitochondrial carrier protein, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101ctg15523_979-4023' '(at5g19760 : 111.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: oxidative phosphorylation uncoupler activity, binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: dicarboxylate carrier 2 (TAIR:AT4G24570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative , Description = , PFAM = PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf00033_26310-33811' '(at1g74240 : 449.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 1 (TAIR:AT4G39460.2); Has 26278 Blast hits to 14077 proteins in 462 species: Archae - 0; Bacteria - 6; Metazoa - 11478; Fungi - 7540; Plants - 4581; Viruses - 0; Other Eukaryotes - 2673 (source: NCBI BLink). & (gnl|cdd|35989 : 353.0) no description available & (gnl|cdd|84566 : 88.0) no description available & (reliability: 898.0) & (original description: Putative Os03g0213800, Description = Mitochondrial carrier protein, expressed, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf00081_5242-14401' '(at5g27520 : 397.0) encodes a peroxisomal adenine nucleotide transporter, involved in fatty acid beta-oxidation during early stage of postgerminative growth.; peroxisomal adenine nucleotide carrier 2 (PNC2); CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: peroxisomal adenine nucleotide carrier 1 (TAIR:AT3G05290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35988 : 329.0) no description available & (reliability: 794.0) & (original description: Putative PNC2, Description = Peroxisomal adenine nucleotide carrier 2, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf00094_349921-356852' '(at3g10110 : 185.0) maternal effect embryo arrest 67 (MEE67); FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport, embryo development ending in seed dormancy; LOCATED IN: mitochondrial inner membrane, chloroplast, mitochondrial inner membrane presequence translocase complex; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (TAIR:AT1G18320.1); Has 680 Blast hits to 680 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 258; Fungi - 229; Plants - 130; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|38435 : 165.0) no description available & (gnl|cdd|85997 : 88.4) no description available & (reliability: 354.0) & (original description: Putative MEE67, Description = Mitochondrial import inner membrane translocase subunit TIM22-1, PFAM = PF02466)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf00189_586245-619307' '(at5g64290 : 184.0) dicarboxylate transport 2.1 (DIT2.1); FUNCTIONS IN: oxoglutarate:malate antiporter activity; INVOLVED IN: malate transport, response to nematode; LOCATED IN: chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sodium/sulphate symporter (InterPro:IPR001898); BEST Arabidopsis thaliana protein match is: dicarboxylate transporter 2.2 (TAIR:AT5G64280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85137 : 171.0) no description available & (q41364|sot1_spiol : 115.0) 2-oxoglutarate/malate translocator, chloroplast precursor - Spinacia oleracea (Spinach) & (reliability: 368.0) & (original description: Putative DCT, Description = Glutamate/malate translocator, PFAM = PF00939)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf00288_701374-718861' '(at2g30160 : 375.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: transporter activity, binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT1G07030.1); Has 27492 Blast hits to 13803 proteins in 455 species: Archae - 0; Bacteria - 0; Metazoa - 11880; Fungi - 7531; Plants - 5269; Viruses - 0; Other Eukaryotes - 2812 (source: NCBI BLink). & (gnl|cdd|35979 : 311.0) no description available & (gnl|cdd|84566 : 86.1) no description available & (reliability: 750.0) & (original description: Putative mcfF, Description = Mitoferrin-1, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf00341_878998-892751' '(at1g55900 : 361.0) component of a translocase in the mitochondrial inner membrane; TIM50; CONTAINS InterPro DOMAIN/s: NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G29780.1). & (gnl|cdd|38043 : 260.0) no description available & (gnl|cdd|47876 : 131.0) no description available & (reliability: 722.0) & (original description: Putative TIM50, Description = Mitochondrial import inner membrane translocase subunit TIM50, PFAM = PF03031)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf00347_53276-58008' '(at4g28390 : 526.0) Encodes a mitochondrial ADP/ATP carrier protein. Shown in heterologous systems to be located in the plasma membrane. Has comparable affinity for ADP and ATP (in E.coli).; ADP/ATP carrier 3 (AAC3); FUNCTIONS IN: binding, ATP:ADP antiporter activity; INVOLVED IN: transport, mitochondrial transport, purine nucleotide transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 2 (TAIR:AT5G13490.2); Has 20286 Blast hits to 12392 proteins in 480 species: Archae - 0; Bacteria - 0; Metazoa - 9416; Fungi - 5054; Plants - 3787; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (p04709|adt1_maize : 509.0) ADP,ATP carrier protein 1, mitochondrial precursor (ADP/ATP translocase 1) (Adenine nucleotide translocator 1) (ANT 1) - Zea mays (Maize) & (gnl|cdd|35968 : 435.0) no description available & (gnl|cdd|84566 : 92.3) no description available & (reliability: 1052.0) & (original description: Putative AAC3, Description = ADP,ATP carrier protein 3, mitochondrial, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf00448_1292374-1297000' '(at1g62280 : 311.0) Encodes a protein with ten predicted transmembrane helices. The SLAH1 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement a slac1-2 mutant suggesting that it performs a similar function. SLAH1:GFP localizes to the plasma membrane.; SLAC1 homologue 1 (SLAH1); CONTAINS InterPro DOMAIN/s: C4-dicarboxylate transporter/malic acid transport protein (InterPro:IPR004695); BEST Arabidopsis thaliana protein match is: SLAC1 homologue 4 (TAIR:AT1G62262.1); Has 719 Blast hits to 716 proteins in 282 species: Archae - 2; Bacteria - 524; Metazoa - 0; Fungi - 6; Plants - 154; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|86376 : 138.0) no description available & (reliability: 622.0) & (original description: Putative SLAH1, Description = S-type anion channel SLAH1, PFAM = PF03595)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf00453_767599-770794' '(at5g46800 : 408.0) Seedling lethal mutation; Mitochondrial Carnitine Acyl Carrier-Like Protein; A BOUT DE SOUFFLE (BOU); FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, ornithine transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, chloroplast, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT2G33820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35977 : 303.0) no description available & (reliability: 816.0) & (original description: Putative BOU, Description = Mitochondrial carnitine/acylcarnitine carrier-like protein, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf00470_325067-333353' '(at4g01100 : 514.0) adenine nucleotide transporter 1 (ADNT1); CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G51050.1). & (gnl|cdd|35971 : 328.0) no description available & (p29518|bt1_maize : 146.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 104.0) no description available & (reliability: 1028.0) & (original description: Putative ADNT1, Description = Mitochondrial adenine nucleotide transporter ADNT1, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf00503_429096-436754' '(at4g01100 : 563.0) adenine nucleotide transporter 1 (ADNT1); CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G51050.1). & (gnl|cdd|35971 : 329.0) no description available & (p29518|bt1_maize : 159.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 104.0) no description available & (reliability: 1126.0) & (original description: Putative mitc10, Description = Mitochondrial substrate carrier, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf00503_431091-436604' '(at4g01100 : 367.0) adenine nucleotide transporter 1 (ADNT1); CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G51050.1). & (gnl|cdd|35971 : 229.0) no description available & (p29518|bt1_maize : 107.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 104.0) no description available & (reliability: 734.0) & (original description: Putative mitc10, Description = Adenine nucleotide transporter 1, PFAM = PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf00503_583232-601180' '(at4g27940 : 415.0) manganese tracking factor for mitochondrial SOD2 (MTM1); FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT2G46320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35980 : 361.0) no description available & (reliability: 830.0) & (original description: Putative MTM1, Description = Mitochondrial carrier protein MTM1, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf00571_1054593-1067203' '(at5g19760 : 482.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: oxidative phosphorylation uncoupler activity, binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: dicarboxylate carrier 2 (TAIR:AT4G24570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35978 : 327.0) no description available & (gnl|cdd|84566 : 80.7) no description available & (reliability: 964.0) & (original description: Putative dtc, Description = Dicarboxylate/tricarboxylate carrier, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf00813_229631-233414' '(p25083|adt1_soltu : 665.0) ADP,ATP carrier protein, mitochondrial precursor (ADP/ATP translocase) (Adenine nucleotide translocator) (ANT) - Solanum tuberosum (Potato) & (at5g13490 : 569.0) Encodes mitochondrial ADP/ATP carrier; ADP/ATP carrier 2 (AAC2); FUNCTIONS IN: protein binding, binding, copper ion binding, ATP:ADP antiporter activity; INVOLVED IN: transport, purine nucleotide transport; LOCATED IN: mitochondrial envelope, mitochondrion, mitochondrial inner membrane, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 1 (TAIR:AT3G08580.2); Has 20201 Blast hits to 12470 proteins in 482 species: Archae - 0; Bacteria - 0; Metazoa - 9190; Fungi - 5149; Plants - 3866; Viruses - 0; Other Eukaryotes - 1996 (source: NCBI BLink). & (gnl|cdd|35968 : 437.0) no description available & (gnl|cdd|84566 : 91.5) no description available & (reliability: 1034.0) & (original description: Putative ANT, Description = ADP,ATP carrier protein, mitochondrial, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf01006_394610-407914' '(at4g39460 : 423.0) Encodes a plastid metabolite transporter required for the import of S-Adenosylmethionine from the cytosol. Impaired function of SAMT1 led to decreased accumulation of prenyllipids and mainly affected the chlorophyll pathway.; S-adenosylmethionine carrier 1 (SAMC1); CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 2 (TAIR:AT1G34065.1). & (gnl|cdd|35987 : 333.0) no description available & (gnl|cdd|84566 : 86.1) no description available & (reliability: 846.0) & (original description: Putative MSCP1, Description = S-adenosylmethionine transporter, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf01007_49539-59047' '(at5g51050 : 743.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, calcium ion binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Mitochondrial substrate carrier (InterPro:IPR001993), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Mitochondrial carrier protein (InterPro:IPR002067), EF-HAND 2 (InterPro:IPR018249), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G07320.1); Has 35093 Blast hits to 20803 proteins in 1083 species: Archae - 0; Bacteria - 15; Metazoa - 13922; Fungi - 9690; Plants - 7280; Viruses - 2; Other Eukaryotes - 4184 (source: NCBI BLink). & (gnl|cdd|35259 : 643.0) no description available & (p29518|bt1_maize : 141.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 96.5) no description available & (reliability: 1486.0) & (original description: Putative slc25a24, Description = Calcium-binding mitochondrial carrier protein SCaMC-1, PFAM = PF13499;PF00153;PF00153;PF00153;PF13202)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf01070_15781-19046' '(at5g42130 : 453.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 2 (TAIR:AT1G34065.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35987 : 266.0) no description available & (gnl|cdd|84566 : 81.1) no description available & (reliability: 906.0) & (original description: Putative MFL1, Description = Protein MITOFERRINLIKE 1, chloroplastic, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf01075_14148-20774' '(at5g15640 : 447.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrion, mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT1G72820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35984 : 355.0) no description available & (reliability: 894.0) & (original description: Putative mitc6, Description = Mitochondrial substrate carrier, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf01176_38881-43847' '(at2g17270 : 435.0) phosphate transporter 3;3 (PHT3;3); FUNCTIONS IN: binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: phosphate transporter 3;1 (TAIR:AT5G14040.1); Has 13958 Blast hits to 10117 proteins in 372 species: Archae - 0; Bacteria - 0; Metazoa - 6388; Fungi - 3631; Plants - 2533; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (gnl|cdd|35986 : 380.0) no description available & (reliability: 870.0) & (original description: Putative mpc1, Description = Phosphate carrier protein, mitochondrial, PFAM = PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf01191_702458-707702' '(at2g17270 : 442.0) phosphate transporter 3;3 (PHT3;3); FUNCTIONS IN: binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: phosphate transporter 3;1 (TAIR:AT5G14040.1); Has 13958 Blast hits to 10117 proteins in 372 species: Archae - 0; Bacteria - 0; Metazoa - 6388; Fungi - 3631; Plants - 2533; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (gnl|cdd|35986 : 384.0) no description available & (reliability: 884.0) & (original description: Putative MPT1, Description = Mitochondrial phosphate carrier protein 1, mitochondrial, PFAM = PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf01218_242683-248676' '(at5g64290 : 518.0) dicarboxylate transport 2.1 (DIT2.1); FUNCTIONS IN: oxoglutarate:malate antiporter activity; INVOLVED IN: malate transport, response to nematode; LOCATED IN: chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sodium/sulphate symporter (InterPro:IPR001898); BEST Arabidopsis thaliana protein match is: dicarboxylate transporter 2.2 (TAIR:AT5G64280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85137 : 372.0) no description available & (q41364|sot1_spiol : 327.0) 2-oxoglutarate/malate translocator, chloroplast precursor - Spinacia oleracea (Spinach) & (reliability: 1036.0) & (original description: Putative citP, Description = 2-oxoglutarate translocator, PFAM = PF00939)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf01232_155152-160748' '(at5g24030 : 589.0) Encodes a protein with ten predicted transmembrane helices. The SLAH3 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement an slac1-2 mutant suggesting that it performs a similar function. SLAH3:GFP localizes to the plasma membrane.; SLAC1 homologue 3 (SLAH3); FUNCTIONS IN: transporter activity; INVOLVED IN: cellular ion homeostasis; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C4-dicarboxylate transporter/malic acid transport protein (InterPro:IPR004695); BEST Arabidopsis thaliana protein match is: SLAC1 homologue 2 (TAIR:AT4G27970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86376 : 207.0) no description available & (reliability: 1178.0) & (original description: Putative SLAH3, Description = S-type anion channel SLAH3, PFAM = PF03595)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf01232_155314-157222' '(at5g24030 : 212.0) Encodes a protein with ten predicted transmembrane helices. The SLAH3 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement an slac1-2 mutant suggesting that it performs a similar function. SLAH3:GFP localizes to the plasma membrane.; SLAC1 homologue 3 (SLAH3); FUNCTIONS IN: transporter activity; INVOLVED IN: cellular ion homeostasis; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C4-dicarboxylate transporter/malic acid transport protein (InterPro:IPR004695); BEST Arabidopsis thaliana protein match is: SLAC1 homologue 2 (TAIR:AT4G27970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 424.0) & (original description: Putative SLAC1, Description = C4-dicarboxylate transporter/malic acid transport protein, PFAM = PF03595;PF03595)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf01232_157223-159546' '(at5g24030 : 236.0) Encodes a protein with ten predicted transmembrane helices. The SLAH3 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement an slac1-2 mutant suggesting that it performs a similar function. SLAH3:GFP localizes to the plasma membrane.; SLAC1 homologue 3 (SLAH3); FUNCTIONS IN: transporter activity; INVOLVED IN: cellular ion homeostasis; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C4-dicarboxylate transporter/malic acid transport protein (InterPro:IPR004695); BEST Arabidopsis thaliana protein match is: SLAC1 homologue 2 (TAIR:AT4G27970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86376 : 81.1) no description available & (reliability: 472.0) & (original description: Putative CDI3, Description = S-type anion channel SLAH2, PFAM = PF03595)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf01329_110375-120629' '(at3g51870 : 495.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, response to nematode; LOCATED IN: mitochondrial inner membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: thylakoid ATP/ADP carrier (TAIR:AT5G01500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35971 : 306.0) no description available & (p29518|bt1_maize : 126.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 92.3) no description available & (reliability: 990.0) & (original description: Putative EAAC, Description = Probable envelope ADP,ATP carrier protein, chloroplastic, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf01463_57959-63240' '(at3g20240 : 427.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT4G32400.1); Has 23519 Blast hits to 13479 proteins in 453 species: Archae - 0; Bacteria - 4; Metazoa - 9210; Fungi - 7314; Plants - 4467; Viruses - 0; Other Eukaryotes - 2524 (source: NCBI BLink). & (gnl|cdd|35971 : 250.0) no description available & (p29518|bt1_maize : 172.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 854.0) & (original description: Putative Os08g0520000, Description = Os08g0520000 protein, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf01557_934243-936819' '(at4g27970 : 111.0) Encodes a protein with ten predicted transmembrane helices. The SLAH2 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. But, it is not expressed in guard cells and cannot complement a slac1-2 mutant suggesting that it performs a different function. SLAH2:GFP localizes to the plasma membrane.; SLAC1 homologue 2 (SLAH2); FUNCTIONS IN: transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: C4-dicarboxylate transporter/malic acid transport protein (InterPro:IPR004695); BEST Arabidopsis thaliana protein match is: SLAC1 homologue 3 (TAIR:AT5G24030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative CDI3, Description = S-type anion channel SLAH2, PFAM = )' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf01648_152931-159232' '(at4g03115 : 337.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: plant uncoupling mitochondrial protein 1 (TAIR:AT3G54110.1); Has 24483 Blast hits to 13698 proteins in 441 species: Archae - 0; Bacteria - 0; Metazoa - 9864; Fungi - 7121; Plants - 4898; Viruses - 3; Other Eukaryotes - 2597 (source: NCBI BLink). & (gnl|cdd|35972 : 193.0) no description available & (gnl|cdd|84566 : 81.5) no description available & (reliability: 674.0) & (original description: Putative MTR_1g088995, Description = Substrate carrier family protein, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf01677_657718-665068' '(at2g17270 : 423.0) phosphate transporter 3;3 (PHT3;3); FUNCTIONS IN: binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: phosphate transporter 3;1 (TAIR:AT5G14040.1); Has 13958 Blast hits to 10117 proteins in 372 species: Archae - 0; Bacteria - 0; Metazoa - 6388; Fungi - 3631; Plants - 2533; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (gnl|cdd|35986 : 381.0) no description available & (reliability: 846.0) & (original description: Putative MPT1, Description = Mitochondrial phosphate carrier protein 1, mitochondrial, PFAM = PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf01682_15697-20023' '(at1g62280 : 325.0) Encodes a protein with ten predicted transmembrane helices. The SLAH1 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement a slac1-2 mutant suggesting that it performs a similar function. SLAH1:GFP localizes to the plasma membrane.; SLAC1 homologue 1 (SLAH1); CONTAINS InterPro DOMAIN/s: C4-dicarboxylate transporter/malic acid transport protein (InterPro:IPR004695); BEST Arabidopsis thaliana protein match is: SLAC1 homologue 4 (TAIR:AT1G62262.1); Has 719 Blast hits to 716 proteins in 282 species: Archae - 2; Bacteria - 524; Metazoa - 0; Fungi - 6; Plants - 154; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|86376 : 135.0) no description available & (reliability: 650.0) & (original description: Putative slah1, Description = SLAC-homologous 1 protein, PFAM = PF03595)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf01682_15703-20368' '(at1g62280 : 322.0) Encodes a protein with ten predicted transmembrane helices. The SLAH1 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement a slac1-2 mutant suggesting that it performs a similar function. SLAH1:GFP localizes to the plasma membrane.; SLAC1 homologue 1 (SLAH1); CONTAINS InterPro DOMAIN/s: C4-dicarboxylate transporter/malic acid transport protein (InterPro:IPR004695); BEST Arabidopsis thaliana protein match is: SLAC1 homologue 4 (TAIR:AT1G62262.1); Has 719 Blast hits to 716 proteins in 282 species: Archae - 2; Bacteria - 524; Metazoa - 0; Fungi - 6; Plants - 154; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|86376 : 128.0) no description available & (reliability: 644.0) & (original description: Putative SLAH1, Description = S-type anion channel SLAH1, PFAM = PF03595)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf01777_38725-46518' '(at5g56450 : 474.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 1 (TAIR:AT3G08580.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35968 : 367.0) no description available & (p27080|adt_chlre : 209.0) ADP,ATP carrier protein (ADP/ATP translocase) (Adenine nucleotide translocator) (ANT) - Chlamydomonas reinhardtii & (gnl|cdd|84566 : 86.5) no description available & (reliability: 948.0) & (original description: Putative ancA, Description = ADP/ATP translocase, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf01848_441235-450701' '(at1g14560 : 424.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: endomembrane system, mitochondrial inner membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Graves disease carrier protein (InterPro:IPR002167); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT4G26180.1); Has 25798 Blast hits to 13799 proteins in 460 species: Archae - 0; Bacteria - 2; Metazoa - 10868; Fungi - 7493; Plants - 4688; Viruses - 0; Other Eukaryotes - 2747 (source: NCBI BLink). & (gnl|cdd|35971 : 302.0) no description available & (p29518|bt1_maize : 124.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 84.6) no description available & (reliability: 848.0) & (original description: Putative At1g14560, Description = Mitochondrial substrate carrier family protein, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf01985_323498-328265' '(at4g03115 : 390.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: plant uncoupling mitochondrial protein 1 (TAIR:AT3G54110.1); Has 24483 Blast hits to 13698 proteins in 441 species: Archae - 0; Bacteria - 0; Metazoa - 9864; Fungi - 7121; Plants - 4898; Viruses - 3; Other Eukaryotes - 2597 (source: NCBI BLink). & (gnl|cdd|35972 : 219.0) no description available & (reliability: 780.0) & (original description: Putative At4g03115, Description = Mitochondrial substrate carrier family protein, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf01998_632119-639914' '(at5g56450 : 476.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 1 (TAIR:AT3G08580.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35968 : 366.0) no description available & (p27080|adt_chlre : 208.0) ADP,ATP carrier protein (ADP/ATP translocase) (Adenine nucleotide translocator) (ANT) - Chlamydomonas reinhardtii & (gnl|cdd|84566 : 86.5) no description available & (reliability: 952.0) & (original description: Putative ancA, Description = ADP/ATP translocase, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf02027_101484-108003' '(at5g51050 : 747.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, calcium ion binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Mitochondrial substrate carrier (InterPro:IPR001993), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Mitochondrial carrier protein (InterPro:IPR002067), EF-HAND 2 (InterPro:IPR018249), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G07320.1); Has 35093 Blast hits to 20803 proteins in 1083 species: Archae - 0; Bacteria - 15; Metazoa - 13922; Fungi - 9690; Plants - 7280; Viruses - 2; Other Eukaryotes - 4184 (source: NCBI BLink). & (gnl|cdd|35259 : 638.0) no description available & (p29518|bt1_maize : 144.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 103.0) no description available & (reliability: 1494.0) & (original description: Putative slc25a25b, Description = Calcium-binding mitochondrial carrier protein SCaMC-2-B, PFAM = PF13499;PF00153;PF00153;PF00153;PF13202)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf02085_1778211-1785318' '(at5g01340 : 514.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: transporter activity, binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT2G37890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35975 : 296.0) no description available & (gnl|cdd|84566 : 89.2) no description available & (reliability: 1028.0) & (original description: Putative SFC1, Description = Mitochondrial succinate-fumarate transporter 1, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf02168_440341-452187' '(at5g19760 : 479.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: oxidative phosphorylation uncoupler activity, binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: dicarboxylate carrier 2 (TAIR:AT4G24570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35978 : 324.0) no description available & (reliability: 958.0) & (original description: Putative dtc, Description = Dicarboxylate/tricarboxylate carrier, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf02268_525744-534895' '(at5g64970 : 471.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT1G78180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35971 : 220.0) no description available & (p29518|bt1_maize : 109.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 942.0) & (original description: Putative At5g64970, Description = Probable mitochondrial adenine nucleotide transporter BTL3, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf02511_287117-294385' '(at4g27940 : 491.0) manganese tracking factor for mitochondrial SOD2 (MTM1); FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT2G46320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35980 : 384.0) no description available & (reliability: 982.0) & (original description: Putative MTM1, Description = Mitochondrial carrier protein MTM1, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf02581_110070-128956' '(at5g51050 : 645.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, calcium ion binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Mitochondrial substrate carrier (InterPro:IPR001993), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Mitochondrial carrier protein (InterPro:IPR002067), EF-HAND 2 (InterPro:IPR018249), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G07320.1); Has 35093 Blast hits to 20803 proteins in 1083 species: Archae - 0; Bacteria - 15; Metazoa - 13922; Fungi - 9690; Plants - 7280; Viruses - 2; Other Eukaryotes - 4184 (source: NCBI BLink). & (gnl|cdd|35259 : 558.0) no description available & (p29518|bt1_maize : 109.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 90.3) no description available & (reliability: 1290.0) & (original description: Putative BnaA10g23770D, Description = BnaA10g23770D protein, PFAM = PF00153;PF00153;PF13499;PF13202)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf02626_759780-768787' '(at5g48970 : 547.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT3G21390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35971 : 319.0) no description available & (p29518|bt1_maize : 129.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 88.0) no description available & (reliability: 1094.0) & (original description: Putative pco141010b, Description = Deoxynucleotide carrier, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf02816_225798-229910' '(at4g26180 : 446.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT1G14560.1); Has 27152 Blast hits to 14144 proteins in 467 species: Archae - 0; Bacteria - 0; Metazoa - 12042; Fungi - 7753; Plants - 4485; Viruses - 3; Other Eukaryotes - 2869 (source: NCBI BLink). & (gnl|cdd|35971 : 308.0) no description available & (p29518|bt1_maize : 126.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 89.2) no description available & (reliability: 892.0) & (original description: Putative Slc25a16, Description = Graves disease carrier protein, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf03147_259443-264305' '(at3g53940 : 436.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT2G37890.1); Has 31235 Blast hits to 14563 proteins in 465 species: Archae - 0; Bacteria - 2; Metazoa - 13401; Fungi - 9616; Plants - 4899; Viruses - 2; Other Eukaryotes - 3315 (source: NCBI BLink). & (gnl|cdd|35971 : 318.0) no description available & (p29518|bt1_maize : 122.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 90.7) no description available & (reliability: 872.0) & (original description: Putative mcfB, Description = Mitochondrial substrate carrier family protein B, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf03371_68665-74490' '(at5g14040 : 512.0) phosphate transporter 3;1 (PHT3;1); FUNCTIONS IN: binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: phosphate transporter 3;2 (TAIR:AT3G48850.1); Has 17134 Blast hits to 11746 proteins in 429 species: Archae - 0; Bacteria - 0; Metazoa - 7375; Fungi - 4841; Plants - 3332; Viruses - 3; Other Eukaryotes - 1583 (source: NCBI BLink). & (gnl|cdd|35986 : 489.0) no description available & (gnl|cdd|84566 : 81.5) no description available & (reliability: 1024.0) & (original description: Putative MPT3, Description = Mitochondrial phosphate carrier protein 3, mitochondrial, PFAM = PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf03694_913910-917807' '(at1g62280 : 317.0) Encodes a protein with ten predicted transmembrane helices. The SLAH1 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement a slac1-2 mutant suggesting that it performs a similar function. SLAH1:GFP localizes to the plasma membrane.; SLAC1 homologue 1 (SLAH1); CONTAINS InterPro DOMAIN/s: C4-dicarboxylate transporter/malic acid transport protein (InterPro:IPR004695); BEST Arabidopsis thaliana protein match is: SLAC1 homologue 4 (TAIR:AT1G62262.1); Has 719 Blast hits to 716 proteins in 282 species: Archae - 2; Bacteria - 524; Metazoa - 0; Fungi - 6; Plants - 154; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|86376 : 125.0) no description available & (reliability: 634.0) & (original description: Putative SLAH1, Description = S-type anion channel SLAH1, PFAM = PF03595)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf03756_232537-238438' '(at5g17400 : 420.0) This gene is predicted to encode an ER-localized adenine nucleotide transporter with six putative transmembrane helices. It appears to act as a ATP:ADP antiporter when expressed in E.coli plasma membranes. Transcript levels for several ER-localized chaperones (e.g. BIP1/2) and other ATP-requiring ER proteins (e.g. CPK2) are reduced in er-ant1 knock-out lines, suggesting a lack of adequate ATP transport into the ER in these mutants. They also have reduced seed oil and seed protein levels.; endoplasmic reticulum-adenine nucleotide transporter 1 (ER-ANT1); CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 3 (TAIR:AT4G28390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35968 : 382.0) no description available & (p04709|adt1_maize : 338.0) ADP,ATP carrier protein 1, mitochondrial precursor (ADP/ATP translocase 1) (Adenine nucleotide translocator 1) (ANT 1) - Zea mays (Maize) & (gnl|cdd|84566 : 80.3) no description available & (reliability: 840.0) & (original description: Putative aac, Description = ADP,ATP carrier protein, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf03817_16221-26078' '(at3g10110 : 175.0) maternal effect embryo arrest 67 (MEE67); FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport, embryo development ending in seed dormancy; LOCATED IN: mitochondrial inner membrane, chloroplast, mitochondrial inner membrane presequence translocase complex; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (TAIR:AT1G18320.1); Has 680 Blast hits to 680 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 258; Fungi - 229; Plants - 130; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|38435 : 167.0) no description available & (gnl|cdd|85997 : 90.3) no description available & (reliability: 330.0) & (original description: Putative MEE67, Description = Mitochondrial import inner membrane translocase subunit TIM22-1, PFAM = PF02466)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf03852_1188-9454' '(at4g17550 : 689.0) Major facilitator superfamily protein; FUNCTIONS IN: sugar:hydrogen symporter activity; INVOLVED IN: carbohydrate transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate starvation-induced gene 3 (TAIR:AT3G47420.1); Has 16541 Blast hits to 16470 proteins in 1914 species: Archae - 148; Bacteria - 14105; Metazoa - 649; Fungi - 878; Plants - 215; Viruses - 0; Other Eukaryotes - 546 (source: NCBI BLink). & (gnl|cdd|37744 : 324.0) no description available & (gnl|cdd|32452 : 159.0) no description available & (reliability: 1378.0) & (original description: Putative At4g17550, Description = Putative glycerol-3-phosphate transporter 4, PFAM = PF07690)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf03852_4295-6967' '(at4g17550 : 229.0) Major facilitator superfamily protein; FUNCTIONS IN: sugar:hydrogen symporter activity; INVOLVED IN: carbohydrate transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate starvation-induced gene 3 (TAIR:AT3G47420.1); Has 16541 Blast hits to 16470 proteins in 1914 species: Archae - 148; Bacteria - 14105; Metazoa - 649; Fungi - 878; Plants - 215; Viruses - 0; Other Eukaryotes - 546 (source: NCBI BLink). & (gnl|cdd|37744 : 114.0) no description available & (reliability: 458.0) & (original description: Putative SPX2, Description = SPX2, PFAM = PF07690)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf03985_269881-281923' '(at4g01100 : 556.0) adenine nucleotide transporter 1 (ADNT1); CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G51050.1). & (gnl|cdd|35971 : 331.0) no description available & (p29518|bt1_maize : 162.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 102.0) no description available & (reliability: 1112.0) & (original description: Putative ADNT1, Description = Mitochondrial adenine nucleotide transporter ADNT1, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf04350_337250-343789' '(at2g33820 : 429.0) encodes a mitochondrial ornithine transporter which exports ornithine from the mitochondrion to the cytosol; MBAC1; FUNCTIONS IN: arginine transmembrane transporter activity, L-histidine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-ornithine transmembrane transporter activity, binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G46800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35977 : 296.0) no description available & (reliability: 858.0) & (original description: Putative BAC1, Description = Mitochondrial arginine transporter BAC1, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf04489_85702-89009' '(at1g79900 : 388.0) encodes a mitochondrial ornithine transporter that exports ornithine from the mitochondria to the cytosol; BAC2; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G46800.1); Has 25782 Blast hits to 14100 proteins in 457 species: Archae - 0; Bacteria - 6; Metazoa - 10775; Fungi - 7497; Plants - 4679; Viruses - 6; Other Eukaryotes - 2819 (source: NCBI BLink). & (gnl|cdd|35981 : 348.0) no description available & (gnl|cdd|84566 : 91.9) no description available & (reliability: 776.0) & (original description: Putative BAC2, Description = Mitochondrial arginine transporter BAC2, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf04641_242452-267611' '(at1g34065 : 383.0) S-adenosylmethionine carrier 2 (SAMC2); FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 1 (TAIR:AT4G39460.2); Has 26837 Blast hits to 14208 proteins in 451 species: Archae - 0; Bacteria - 2; Metazoa - 11303; Fungi - 7745; Plants - 4960; Viruses - 0; Other Eukaryotes - 2827 (source: NCBI BLink). & (gnl|cdd|35987 : 315.0) no description available & (gnl|cdd|84566 : 81.1) no description available & (reliability: 766.0) & (original description: Putative MSCP1, Description = S-adenosylmethionine mitochondrial carrier protein, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf04820_234593-240227' '(o24381|tlc1_soltu : 978.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (at1g80300 : 843.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (gnl|cdd|66864 : 649.0) no description available & (reliability: 1654.0) & (original description: Putative npt, Description = ADP,ATP carrier protein 1, PFAM = PF03219)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf04943_118713-126669' '(at1g25380 : 408.0) Encodes a mitochondrial-localized NAD+ transporter that transports NAD+ in a counter exchange mode with ADP and AMP in vitro.; NAD+ transporter 2 (NDT2); FUNCTIONS IN: binding, NAD transporter activity; INVOLVED IN: transport, NAD transport, mitochondrial transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: NAD+ transporter 1 (TAIR:AT2G47490.1); Has 30606 Blast hits to 14728 proteins in 470 species: Archae - 0; Bacteria - 8; Metazoa - 12581; Fungi - 9084; Plants - 5612; Viruses - 5; Other Eukaryotes - 3316 (source: NCBI BLink). & (gnl|cdd|35976 : 309.0) no description available & (gnl|cdd|84566 : 90.3) no description available & (p29518|bt1_maize : 81.6) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 816.0) & (original description: Putative NDT1, Description = Nicotinamide adenine dinucleotide transporter 1, chloroplastic, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf05348_112071-116453' '(at1g12480 : 687.0) Encodes a membrane protein with 10 predicted transmembrane helices. SLAC1 is a multispanning membrane protein expressed predominantly in guard cells that plays a role in regulating cellular ion homeostasis and S-type anion currents. SLAC1 is important for normal stomatal closure in response to a variety of signals including elevated CO2, ozone, ABA, darkness, and humidity. SLAC1:GFP localizes to the plasma membrane.; OZONE-SENSITIVE 1 (OZS1); CONTAINS InterPro DOMAIN/s: C4-dicarboxylate transporter/malic acid transport protein (InterPro:IPR004695); BEST Arabidopsis thaliana protein match is: SLAC1 homologue 3 (TAIR:AT5G24030.1); Has 903 Blast hits to 900 proteins in 365 species: Archae - 17; Bacteria - 650; Metazoa - 0; Fungi - 31; Plants - 165; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|86376 : 204.0) no description available & (reliability: 1374.0) & (original description: Putative SLAC1, Description = Guard cell S-type anion channel SLAC1, PFAM = PF03595)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf05449_271139-276942' '(at4g26180 : 456.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT1G14560.1); Has 27152 Blast hits to 14144 proteins in 467 species: Archae - 0; Bacteria - 0; Metazoa - 12042; Fungi - 7753; Plants - 4485; Viruses - 3; Other Eukaryotes - 2869 (source: NCBI BLink). & (gnl|cdd|35971 : 312.0) no description available & (p29518|bt1_maize : 128.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 88.0) no description available & (reliability: 912.0) & (original description: Putative Sb04g008020, Description = Putative uncharacterized protein Sb04g008020, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf05581_44504-53475' '(at1g55900 : 355.0) component of a translocase in the mitochondrial inner membrane; TIM50; CONTAINS InterPro DOMAIN/s: NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G29780.1). & (gnl|cdd|38043 : 254.0) no description available & (gnl|cdd|47876 : 123.0) no description available & (reliability: 710.0) & (original description: Putative TIM50, Description = Mitochondrial import inner membrane translocase subunit TIM50, PFAM = PF03031)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf05764_314057-322892' '(at5g66380 : 426.0) Encodes a folate transporter that is located in the chloroplast envelope and is able to mediate exogenous folate uptake when expressed in E. coli. However, this is not the sole folate transporter for chloroplasts as null mutants of this gene have no discernible phenotype when grown under folate-sufficient conditions and contained wild-type levels of folates in leaves.; folate transporter 1 (FOLT1); CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: NAD+ transporter 2 (TAIR:AT1G25380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35983 : 316.0) no description available & (p29518|bt1_maize : 95.1) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 87.3) no description available & (reliability: 852.0) & (original description: Putative FOLT1, Description = Folate transporter 1, chloroplastic, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf06153_366580-370108' '(at5g46800 : 391.0) Seedling lethal mutation; Mitochondrial Carnitine Acyl Carrier-Like Protein; A BOUT DE SOUFFLE (BOU); FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, ornithine transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, chloroplast, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT2G33820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35977 : 299.0) no description available & (gnl|cdd|84566 : 83.8) no description available & (reliability: 782.0) & (original description: Putative BOU, Description = Mitochondrial carnitine/acylcarnitine carrier-like protein, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf06203_502203-504364' '(at1g49410 : 83.6) translocase of the outer mitochondrial membrane 6 (TOM6); Has 30 Blast hits to 30 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative TOM6, Description = Mitochondrial import receptor subunit TOM6-like protein, PFAM = )' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf06216_137779-142826' '(at1g79900 : 417.0) encodes a mitochondrial ornithine transporter that exports ornithine from the mitochondria to the cytosol; BAC2; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G46800.1); Has 25782 Blast hits to 14100 proteins in 457 species: Archae - 0; Bacteria - 6; Metazoa - 10775; Fungi - 7497; Plants - 4679; Viruses - 6; Other Eukaryotes - 2819 (source: NCBI BLink). & (gnl|cdd|35981 : 364.0) no description available & (gnl|cdd|84566 : 96.1) no description available & (reliability: 834.0) & (original description: Putative BAC2, Description = Mitochondrial arginine transporter BAC2, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf06435_66477-68638' '(at1g49410 : 86.3) translocase of the outer mitochondrial membrane 6 (TOM6); Has 30 Blast hits to 30 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative TOM6, Description = Mitochondrial import receptor subunit TOM6 homolog, PFAM = )' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf06684_539590-545204' '(at5g24030 : 604.0) Encodes a protein with ten predicted transmembrane helices. The SLAH3 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement an slac1-2 mutant suggesting that it performs a similar function. SLAH3:GFP localizes to the plasma membrane.; SLAC1 homologue 3 (SLAH3); FUNCTIONS IN: transporter activity; INVOLVED IN: cellular ion homeostasis; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C4-dicarboxylate transporter/malic acid transport protein (InterPro:IPR004695); BEST Arabidopsis thaliana protein match is: SLAC1 homologue 2 (TAIR:AT4G27970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86376 : 208.0) no description available & (reliability: 1208.0) & (original description: Putative SLAH3, Description = S-type anion channel SLAH3, PFAM = PF03595)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf07165_264048-268591' '(at5g14040 : 493.0) phosphate transporter 3;1 (PHT3;1); FUNCTIONS IN: binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: phosphate transporter 3;2 (TAIR:AT3G48850.1); Has 17134 Blast hits to 11746 proteins in 429 species: Archae - 0; Bacteria - 0; Metazoa - 7375; Fungi - 4841; Plants - 3332; Viruses - 3; Other Eukaryotes - 1583 (source: NCBI BLink). & (gnl|cdd|35986 : 478.0) no description available & (gnl|cdd|84566 : 80.3) no description available & (reliability: 986.0) & (original description: Putative mpt, Description = Mitochondrial phosphate translocator, PFAM = PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf07511_140546-143514' '(at2g22500 : 389.0) Encodes one of the mitochondrial dicarboxylate carriers (DIC): DIC1 (AT2G22500), DIC2 (AT4G24570), DIC3 (AT5G09470).; uncoupling protein 5 (UCP5); FUNCTIONS IN: binding, dicarboxylic acid transmembrane transporter activity; INVOLVED IN: transport, mitochondrial transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial brown fat uncoupling protein (InterPro:IPR002030), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: dicarboxylate carrier 2 (TAIR:AT4G24570.1); Has 25222 Blast hits to 13203 proteins in 454 species: Archae - 0; Bacteria - 2; Metazoa - 10525; Fungi - 7328; Plants - 4898; Viruses - 0; Other Eukaryotes - 2469 (source: NCBI BLink). & (gnl|cdd|35978 : 359.0) no description available & (gnl|cdd|84566 : 84.6) no description available & (reliability: 778.0) & (original description: Putative PUMP4, Description = Mitochondrial uncoupling protein 4, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf07608_211005-217170' '(at5g64290 : 644.0) dicarboxylate transport 2.1 (DIT2.1); FUNCTIONS IN: oxoglutarate:malate antiporter activity; INVOLVED IN: malate transport, response to nematode; LOCATED IN: chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sodium/sulphate symporter (InterPro:IPR001898); BEST Arabidopsis thaliana protein match is: dicarboxylate transporter 2.2 (TAIR:AT5G64280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85137 : 398.0) no description available & (q41364|sot1_spiol : 354.0) 2-oxoglutarate/malate translocator, chloroplast precursor - Spinacia oleracea (Spinach) & (reliability: 1288.0) & (original description: Putative citT, Description = 2-oxoglutarate translocator, PFAM = PF00939)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf07709_108922-111083' '(at1g49410 : 85.1) translocase of the outer mitochondrial membrane 6 (TOM6); Has 30 Blast hits to 30 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative TOM6, Description = Mitochondrial import receptor subunit TOM6 homolog, PFAM = )' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf07953_96102-103324' '(at4g28390 : 536.0) Encodes a mitochondrial ADP/ATP carrier protein. Shown in heterologous systems to be located in the plasma membrane. Has comparable affinity for ADP and ATP (in E.coli).; ADP/ATP carrier 3 (AAC3); FUNCTIONS IN: binding, ATP:ADP antiporter activity; INVOLVED IN: transport, mitochondrial transport, purine nucleotide transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 2 (TAIR:AT5G13490.2); Has 20286 Blast hits to 12392 proteins in 480 species: Archae - 0; Bacteria - 0; Metazoa - 9416; Fungi - 5054; Plants - 3787; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (p04709|adt1_maize : 510.0) ADP,ATP carrier protein 1, mitochondrial precursor (ADP/ATP translocase 1) (Adenine nucleotide translocator 1) (ANT 1) - Zea mays (Maize) & (gnl|cdd|35968 : 438.0) no description available & (gnl|cdd|84566 : 92.7) no description available & (reliability: 1072.0) & (original description: Putative AAC3, Description = ADP,ATP carrier protein 3, mitochondrial, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf08222_245051-251702' '(o24381|tlc1_soltu : 1012.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (at1g80300 : 850.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (gnl|cdd|66864 : 648.0) no description available & (reliability: 1680.0) & (original description: Putative npt, Description = ADP,ATP carrier protein 1, PFAM = PF03219)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf08844_64349-68783' '(p25083|adt1_soltu : 577.0) ADP,ATP carrier protein, mitochondrial precursor (ADP/ATP translocase) (Adenine nucleotide translocator) (ANT) - Solanum tuberosum (Potato) & (at5g13490 : 545.0) Encodes mitochondrial ADP/ATP carrier; ADP/ATP carrier 2 (AAC2); FUNCTIONS IN: protein binding, binding, copper ion binding, ATP:ADP antiporter activity; INVOLVED IN: transport, purine nucleotide transport; LOCATED IN: mitochondrial envelope, mitochondrion, mitochondrial inner membrane, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 1 (TAIR:AT3G08580.2); Has 20201 Blast hits to 12470 proteins in 482 species: Archae - 0; Bacteria - 0; Metazoa - 9190; Fungi - 5149; Plants - 3866; Viruses - 0; Other Eukaryotes - 1996 (source: NCBI BLink). & (gnl|cdd|35968 : 435.0) no description available & (gnl|cdd|84566 : 91.9) no description available & (reliability: 1056.0) & (original description: Putative ANT, Description = ADP,ATP carrier protein, mitochondrial, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf09004_252761-260266' '(at4g15010 : 456.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: endomembrane system, mitochondrial inner membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 2 (TAIR:AT1G34065.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 912.0) & (original description: Putative dl3547c, Description = Putative uncharacterized protein AT4g15010, PFAM = PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf09101_59238-64522' '(at2g30160 : 455.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: transporter activity, binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT1G07030.1); Has 27492 Blast hits to 13803 proteins in 455 species: Archae - 0; Bacteria - 0; Metazoa - 11880; Fungi - 7531; Plants - 5269; Viruses - 0; Other Eukaryotes - 2812 (source: NCBI BLink). & (gnl|cdd|35979 : 362.0) no description available & (p29518|bt1_maize : 92.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 91.9) no description available & (reliability: 910.0) & (original description: Putative mcfF, Description = Mitoferrin, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf09648_154406-165880' '(at2g47490 : 448.0) Encodes a chloroplast-localized NAD+ transporter that transports NAD+ in a counter exchange mode with ADP and AMP in vitro.; NAD+ transporter 1 (NDT1); CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: NAD+ transporter 2 (TAIR:AT1G25380.1); Has 28896 Blast hits to 14510 proteins in 466 species: Archae - 0; Bacteria - 6; Metazoa - 12245; Fungi - 8541; Plants - 5076; Viruses - 8; Other Eukaryotes - 3020 (source: NCBI BLink). & (gnl|cdd|35983 : 343.0) no description available & (gnl|cdd|84566 : 92.7) no description available & (p29518|bt1_maize : 92.4) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 896.0) & (original description: Putative NDT1, Description = Nicotinamide adenine dinucleotide transporter 1, chloroplastic, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf10053_107367-114398' '(at3g05290 : 367.0) encodes a peroxisomal adenine nucleotide transporter, involved in fatty acid beta-oxidation during early stage of postgerminative growth.; peroxisomal adenine nucleotide carrier 1 (PNC1); CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: peroxisomal adenine nucleotide carrier 2 (TAIR:AT5G27520.1); Has 7303 Blast hits to 6606 proteins in 315 species: Archae - 0; Bacteria - 0; Metazoa - 2896; Fungi - 2326; Plants - 1372; Viruses - 0; Other Eukaryotes - 709 (source: NCBI BLink). & (gnl|cdd|35988 : 332.0) no description available & (reliability: 734.0) & (original description: Putative PNC1, Description = Peroxisomal adenine nucleotide carrier 1, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf10381_39330-53817' '(at5g64970 : 424.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT1G78180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35971 : 224.0) no description available & (p29518|bt1_maize : 105.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 848.0) & (original description: Putative At5g64970, Description = Probable mitochondrial adenine nucleotide transporter BTL3, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf13525_4196-11898' '(at3g53940 : 426.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT2G37890.1); Has 31235 Blast hits to 14563 proteins in 465 species: Archae - 0; Bacteria - 2; Metazoa - 13401; Fungi - 9616; Plants - 4899; Viruses - 2; Other Eukaryotes - 3315 (source: NCBI BLink). & (gnl|cdd|35971 : 318.0) no description available & (p29518|bt1_maize : 140.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 88.4) no description available & (reliability: 852.0) & (original description: Putative mcfB, Description = Mitochondrial substrate carrier family protein B, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf13950_72827-75840' '(at1g72820 : 454.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G26200.1); Has 20856 Blast hits to 12399 proteins in 415 species: Archae - 0; Bacteria - 0; Metazoa - 8678; Fungi - 5994; Plants - 4095; Viruses - 0; Other Eukaryotes - 2089 (source: NCBI BLink). & (gnl|cdd|35984 : 355.0) no description available & (reliability: 908.0) & (original description: Putative ORF36, Description = Mitochondrial carrier protein, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf14299_151872-154996' '(at2g22500 : 405.0) Encodes one of the mitochondrial dicarboxylate carriers (DIC): DIC1 (AT2G22500), DIC2 (AT4G24570), DIC3 (AT5G09470).; uncoupling protein 5 (UCP5); FUNCTIONS IN: binding, dicarboxylic acid transmembrane transporter activity; INVOLVED IN: transport, mitochondrial transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial brown fat uncoupling protein (InterPro:IPR002030), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: dicarboxylate carrier 2 (TAIR:AT4G24570.1); Has 25222 Blast hits to 13203 proteins in 454 species: Archae - 0; Bacteria - 2; Metazoa - 10525; Fungi - 7328; Plants - 4898; Viruses - 0; Other Eukaryotes - 2469 (source: NCBI BLink). & (gnl|cdd|35978 : 364.0) no description available & (gnl|cdd|84566 : 83.4) no description available & (reliability: 810.0) & (original description: Putative ucpB, Description = Mitochondrial 2-oxoglutarate/malate carrier protein, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf16812_157574-172228' '(at5g48970 : 545.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT3G21390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35971 : 318.0) no description available & (p29518|bt1_maize : 130.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 88.0) no description available & (reliability: 1090.0) & (original description: Putative pco141010b, Description = Deoxynucleotide carrier, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf21544_74358-79801' '(at1g14140 : 406.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: transporter activity, binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: uncoupling protein 2 (TAIR:AT5G58970.1); Has 28913 Blast hits to 14062 proteins in 461 species: Archae - 0; Bacteria - 4; Metazoa - 12057; Fungi - 8822; Plants - 5230; Viruses - 3; Other Eukaryotes - 2797 (source: NCBI BLink). & (gnl|cdd|35972 : 364.0) no description available & (gnl|cdd|84566 : 92.3) no description available & (reliability: 812.0) & (original description: Putative ucp3, Description = Putative uncharacterized protein ucp3, PFAM = PF00153;PF00153;PF00153)' T '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'niben101scf31633_2687-15931' '(at2g35800 : 986.0) mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, calcium ion binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), Mitochondrial substrate carrier (InterPro:IPR001993), EF-hand-like domain (InterPro:IPR011992), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT2G26360.1); Has 17569 Blast hits to 12630 proteins in 423 species: Archae - 0; Bacteria - 12; Metazoa - 7266; Fungi - 5152; Plants - 3396; Viruses - 0; Other Eukaryotes - 1743 (source: NCBI BLink). & (gnl|cdd|35987 : 293.0) no description available & (reliability: 1972.0) & (original description: Putative BnaA03g16310D, Description = BnaA03g16310D protein, PFAM = PF00153;PF00153;PF00153)' T '34.10' 'transport.nucleotides' 'nbv0.3scaffold2676_16676-19866' '(at1g30840 : 335.0) Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.; purine permease 4 (PUP4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 1 (TAIR:AT1G28230.1). & (gnl|cdd|66803 : 96.0) no description available & (reliability: 670.0) & (original description: Putative PUP4, Description = Putative purine permease 4, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'nbv0.3scaffold9447_47344-50738' '(at1g28220 : 322.0) Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.; purine permease 3 (PUP3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 2 (TAIR:AT2G33750.2); Has 782 Blast hits to 771 proteins in 171 species: Archae - 1; Bacteria - 157; Metazoa - 97; Fungi - 2; Plants - 399; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (gnl|cdd|66803 : 85.2) no description available & (reliability: 644.0) & (original description: Putative PUP3, Description = Purine permease 3, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'nbv0.3scaffold19514_17411-21397' '(at1g28230 : 164.0) Encodes a transporter that transports purines,cytokinins and other adenine derivatives. Expressed in the leaf hydathodes where it may be involved in re-uptake of cytokinins during guttation.; purine permease 1 (PUP1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 3 (TAIR:AT1G28220.1); Has 617 Blast hits to 607 proteins in 89 species: Archae - 4; Bacteria - 97; Metazoa - 10; Fungi - 14; Plants - 377; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative umc2598, Description = Purine permease 3, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'nbv0.3scaffold34547_19535-22325' '(at4g18210 : 318.0) Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.; purine permease 10 (PUP10); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Drug/metabolite transporter superfamily protein (TAIR:AT4G18220.1); Has 419 Blast hits to 410 proteins in 44 species: Archae - 2; Bacteria - 21; Metazoa - 7; Fungi - 18; Plants - 360; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66803 : 99.9) no description available & (reliability: 636.0) & (original description: Putative PUP9, Description = Probable purine permease 9, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'nbv0.3scaffold50638_5592-9328' '(at5g03555 : 671.0) permease, cytosine/purines, uracil, thiamine, allantoin family protein; FUNCTIONS IN: nucleobase transmembrane transporter activity; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Permease, cytosine/purines, uracil, thiamine, allantoin (InterPro:IPR001248); Has 4949 Blast hits to 4943 proteins in 959 species: Archae - 81; Bacteria - 2901; Metazoa - 0; Fungi - 592; Plants - 52; Viruses - 0; Other Eukaryotes - 1323 (source: NCBI BLink). & (gnl|cdd|37677 : 451.0) no description available & (gnl|cdd|32136 : 389.0) no description available & (reliability: 1342.0) & (original description: Putative NCS1, Description = Purine-uracil permease NCS1, PFAM = PF02133)' T '34.10' 'transport.nucleotides' 'nbv0.3scaffold75458_2839-7396' '(at4g18210 : 303.0) Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.; purine permease 10 (PUP10); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Drug/metabolite transporter superfamily protein (TAIR:AT4G18220.1); Has 419 Blast hits to 410 proteins in 44 species: Archae - 2; Bacteria - 21; Metazoa - 7; Fungi - 18; Plants - 360; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66803 : 100.0) no description available & (reliability: 606.0) & (original description: Putative PUP9, Description = Probable purine permease 9, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'nbv0.3scaffold82364_780-4999' '(at1g28220 : 348.0) Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.; purine permease 3 (PUP3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 2 (TAIR:AT2G33750.2); Has 782 Blast hits to 771 proteins in 171 species: Archae - 1; Bacteria - 157; Metazoa - 97; Fungi - 2; Plants - 399; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (gnl|cdd|66803 : 89.8) no description available & (reliability: 696.0) & (original description: Putative PUP3, Description = Purine permease 3, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'nbv0.5scaffold113_805626-814794' '(at1g71900 : 454.0) Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF803) (TAIR:AT1G34470.1); Has 1265 Blast hits to 1244 proteins in 219 species: Archae - 0; Bacteria - 92; Metazoa - 420; Fungi - 372; Plants - 263; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|38133 : 446.0) no description available & (gnl|cdd|86910 : 431.0) no description available & (reliability: 898.0) & (original description: Putative At1g71900, Description = Probable magnesium transporter NIPA4, PFAM = PF05653)' T '34.10' 'transport.nucleotides' 'nbv0.5scaffold1112_456490-465710' '(gnl|cdd|86910 : 359.0) no description available & (gnl|cdd|38133 : 358.0) no description available & (at1g34470 : 324.0) Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF803) (TAIR:AT4G09640.1); Has 1275 Blast hits to 1251 proteins in 224 species: Archae - 0; Bacteria - 101; Metazoa - 420; Fungi - 374; Plants - 269; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (reliability: 648.0) & (original description: Putative PGSC0003DMG400004439, Description = Probable magnesium transporter, PFAM = PF05653)' T '34.10' 'transport.nucleotides' 'niben044scf00006653ctg011_11577-15356' '(at1g28230 : 236.0) Encodes a transporter that transports purines,cytokinins and other adenine derivatives. Expressed in the leaf hydathodes where it may be involved in re-uptake of cytokinins during guttation.; purine permease 1 (PUP1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 3 (TAIR:AT1G28220.1); Has 617 Blast hits to 607 proteins in 89 species: Archae - 4; Bacteria - 97; Metazoa - 10; Fungi - 14; Plants - 377; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative PUP1, Description = Purine permease 3, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'niben044scf00033201ctg000_7783-11285' '(at1g28220 : 335.0) Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.; purine permease 3 (PUP3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 2 (TAIR:AT2G33750.2); Has 782 Blast hits to 771 proteins in 171 species: Archae - 1; Bacteria - 157; Metazoa - 97; Fungi - 2; Plants - 399; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (gnl|cdd|66803 : 85.6) no description available & (reliability: 670.0) & (original description: Putative PUP3, Description = Purine permease 3, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'niben044scf00058219ctg001_1-7345' '(gnl|cdd|86910 : 314.0) no description available & (gnl|cdd|38133 : 313.0) no description available & (at1g34470 : 235.0) Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF803) (TAIR:AT4G09640.1); Has 1275 Blast hits to 1251 proteins in 224 species: Archae - 0; Bacteria - 101; Metazoa - 420; Fungi - 374; Plants - 269; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (reliability: 470.0) & (original description: Putative LOC100274084, Description = Probable magnesium transporter, PFAM = PF05653)' T '34.10' 'transport.nucleotides' 'niben044scf00058262ctg000_1698-5917' '(at1g28220 : 351.0) Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.; purine permease 3 (PUP3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 2 (TAIR:AT2G33750.2); Has 782 Blast hits to 771 proteins in 171 species: Archae - 1; Bacteria - 157; Metazoa - 97; Fungi - 2; Plants - 399; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (gnl|cdd|66803 : 91.8) no description available & (reliability: 702.0) & (original description: Putative PUP3, Description = Purine permease 3, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'niben101scf00442_403826-408695' '(at1g28230 : 328.0) Encodes a transporter that transports purines,cytokinins and other adenine derivatives. Expressed in the leaf hydathodes where it may be involved in re-uptake of cytokinins during guttation.; purine permease 1 (PUP1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 3 (TAIR:AT1G28220.1); Has 617 Blast hits to 607 proteins in 89 species: Archae - 4; Bacteria - 97; Metazoa - 10; Fungi - 14; Plants - 377; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|66803 : 84.1) no description available & (reliability: 656.0) & (original description: Putative PUP1, Description = Purine permease 3, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'niben101scf00442_487872-491699' '(at1g28230 : 304.0) Encodes a transporter that transports purines,cytokinins and other adenine derivatives. Expressed in the leaf hydathodes where it may be involved in re-uptake of cytokinins during guttation.; purine permease 1 (PUP1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 3 (TAIR:AT1G28220.1); Has 617 Blast hits to 607 proteins in 89 species: Archae - 4; Bacteria - 97; Metazoa - 10; Fungi - 14; Plants - 377; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 608.0) & (original description: Putative PUP1, Description = Purine permease 3, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'niben101scf00442_501810-505751' '(at1g28220 : 310.0) Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.; purine permease 3 (PUP3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 2 (TAIR:AT2G33750.2); Has 782 Blast hits to 771 proteins in 171 species: Archae - 1; Bacteria - 157; Metazoa - 97; Fungi - 2; Plants - 399; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (gnl|cdd|66803 : 82.5) no description available & (reliability: 620.0) & (original description: Putative PUP1, Description = Purine permease 1, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'niben101scf00442_957489-961265' '(at1g28220 : 301.0) Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.; purine permease 3 (PUP3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 2 (TAIR:AT2G33750.2); Has 782 Blast hits to 771 proteins in 171 species: Archae - 1; Bacteria - 157; Metazoa - 97; Fungi - 2; Plants - 399; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (gnl|cdd|66803 : 82.1) no description available & (reliability: 602.0) & (original description: Putative Sb02g027100, Description = Putative uncharacterized protein Sb02g027100, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'niben101scf00700_249024-252142' '(at1g30840 : 328.0) Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.; purine permease 4 (PUP4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 1 (TAIR:AT1G28230.1). & (gnl|cdd|66803 : 89.1) no description available & (reliability: 656.0) & (original description: Putative PUP4, Description = Probable purine permease 4, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'niben101scf00980_77195-80746' '(at1g28230 : 301.0) Encodes a transporter that transports purines,cytokinins and other adenine derivatives. Expressed in the leaf hydathodes where it may be involved in re-uptake of cytokinins during guttation.; purine permease 1 (PUP1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 3 (TAIR:AT1G28220.1); Has 617 Blast hits to 607 proteins in 89 species: Archae - 4; Bacteria - 97; Metazoa - 10; Fungi - 14; Plants - 377; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|66803 : 85.2) no description available & (reliability: 602.0) & (original description: Putative PUP3, Description = Purine permease 3, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'niben101scf01062_453428-458272' '(at2g24220 : 331.0) Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.; purine permease 5 (PUP5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 1 (TAIR:AT1G28230.1). & (reliability: 662.0) & (original description: Putative PUP5, Description = Probable purine permease 5, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'niben101scf01785_745552-750088' '(at4g18210 : 301.0) Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.; purine permease 10 (PUP10); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Drug/metabolite transporter superfamily protein (TAIR:AT4G18220.1); Has 419 Blast hits to 410 proteins in 44 species: Archae - 2; Bacteria - 21; Metazoa - 7; Fungi - 18; Plants - 360; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66803 : 98.3) no description available & (reliability: 602.0) & (original description: Putative PUP9, Description = Probable purine permease 9, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'niben101scf01785_930808-934087' '(at4g18220 : 280.0) Drug/metabolite transporter superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 10 (TAIR:AT4G18210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66803 : 103.0) no description available & (reliability: 560.0) & (original description: Putative PUP9, Description = Probable purine permease 9, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'niben101scf01970_146106-156125' '(at1g34470 : 462.0) Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF803) (TAIR:AT4G09640.1); Has 1275 Blast hits to 1251 proteins in 224 species: Archae - 0; Bacteria - 101; Metazoa - 420; Fungi - 374; Plants - 269; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|38133 : 434.0) no description available & (gnl|cdd|86910 : 425.0) no description available & (reliability: 924.0) & (original description: Putative At1g71900, Description = Probable magnesium transporter NIPA4, PFAM = PF05653)' T '34.10' 'transport.nucleotides' 'niben101scf03340_391304-399707' '(gnl|cdd|38133 : 386.0) no description available & (gnl|cdd|86910 : 386.0) no description available & (at2g21120 : 356.0) Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF803) (TAIR:AT4G38730.1); Has 1321 Blast hits to 1303 proteins in 250 species: Archae - 0; Bacteria - 151; Metazoa - 424; Fungi - 360; Plants - 267; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (reliability: 664.0) & (original description: Putative At2g21120, Description = Probable magnesium transporter NIPA6, PFAM = PF05653)' T '34.10' 'transport.nucleotides' 'niben101scf03455_96475-100358' '(at4g18210 : 279.0) Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.; purine permease 10 (PUP10); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Drug/metabolite transporter superfamily protein (TAIR:AT4G18220.1); Has 419 Blast hits to 410 proteins in 44 species: Archae - 2; Bacteria - 21; Metazoa - 7; Fungi - 18; Plants - 360; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66803 : 99.5) no description available & (reliability: 558.0) & (original description: Putative PUP9, Description = Probable purine permease 9, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'niben101scf03455_102102-105786' '(at4g18210 : 303.0) Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.; purine permease 10 (PUP10); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Drug/metabolite transporter superfamily protein (TAIR:AT4G18220.1); Has 419 Blast hits to 410 proteins in 44 species: Archae - 2; Bacteria - 21; Metazoa - 7; Fungi - 18; Plants - 360; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66803 : 107.0) no description available & (reliability: 606.0) & (original description: Putative PUP8, Description = Probable purine permease 8, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'niben101scf03628_15063-25457' '(gnl|cdd|38133 : 419.0) no description available & (gnl|cdd|86910 : 414.0) no description available & (at1g34470 : 393.0) Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF803) (TAIR:AT4G09640.1); Has 1275 Blast hits to 1251 proteins in 224 species: Archae - 0; Bacteria - 101; Metazoa - 420; Fungi - 374; Plants - 269; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (reliability: 786.0) & (original description: Putative v1g247925, Description = Probable magnesium transporter, PFAM = PF05653)' T '34.10' 'transport.nucleotides' 'niben101scf04217_585848-589663' '(at1g28220 : 325.0) Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.; purine permease 3 (PUP3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 2 (TAIR:AT2G33750.2); Has 782 Blast hits to 771 proteins in 171 species: Archae - 1; Bacteria - 157; Metazoa - 97; Fungi - 2; Plants - 399; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (gnl|cdd|66803 : 84.8) no description available & (reliability: 650.0) & (original description: Putative PUP3, Description = Purine permease 3, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'niben101scf04875_521139-525418' '(at5g03555 : 677.0) permease, cytosine/purines, uracil, thiamine, allantoin family protein; FUNCTIONS IN: nucleobase transmembrane transporter activity; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Permease, cytosine/purines, uracil, thiamine, allantoin (InterPro:IPR001248); Has 4949 Blast hits to 4943 proteins in 959 species: Archae - 81; Bacteria - 2901; Metazoa - 0; Fungi - 592; Plants - 52; Viruses - 0; Other Eukaryotes - 1323 (source: NCBI BLink). & (gnl|cdd|37677 : 452.0) no description available & (gnl|cdd|32136 : 387.0) no description available & (reliability: 1354.0) & (original description: Putative NCS1, Description = Purine-uracil permease NCS1, PFAM = PF02133)' T '34.10' 'transport.nucleotides' 'niben101scf04881_11317-16018' '(at4g18210 : 293.0) Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.; purine permease 10 (PUP10); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Drug/metabolite transporter superfamily protein (TAIR:AT4G18220.1); Has 419 Blast hits to 410 proteins in 44 species: Archae - 2; Bacteria - 21; Metazoa - 7; Fungi - 18; Plants - 360; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|66803 : 81.0) no description available & (reliability: 586.0) & (original description: Putative PUP6, Description = Putative purine permease 10, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'niben101scf05270_243497-247388' '(at1g28220 : 307.0) Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.; purine permease 3 (PUP3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 2 (TAIR:AT2G33750.2); Has 782 Blast hits to 771 proteins in 171 species: Archae - 1; Bacteria - 157; Metazoa - 97; Fungi - 2; Plants - 399; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (gnl|cdd|66803 : 86.4) no description available & (reliability: 614.0) & (original description: Putative PUP2, Description = Purine permease 2, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'niben101scf05310_547415-563645' '(at1g71900 : 474.0) Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF803) (TAIR:AT1G34470.1); Has 1265 Blast hits to 1244 proteins in 219 species: Archae - 0; Bacteria - 92; Metazoa - 420; Fungi - 372; Plants - 263; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|38133 : 441.0) no description available & (gnl|cdd|86910 : 426.0) no description available & (reliability: 936.0) & (original description: Putative At1g71900, Description = Probable magnesium transporter NIPA4, PFAM = PF05653)' T '34.10' 'transport.nucleotides' 'niben101scf07498_194422-200898' '(gnl|cdd|86910 : 332.0) no description available & (gnl|cdd|38133 : 325.0) no description available & (at3g23870 : 242.0) Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF803) (TAIR:AT4G13800.1); Has 1388 Blast hits to 1369 proteins in 245 species: Archae - 2; Bacteria - 146; Metazoa - 422; Fungi - 370; Plants - 270; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (reliability: 484.0) & (original description: Putative At1g34470, Description = Probable magnesium transporter, PFAM = PF05653;PF05653)' T '34.10' 'transport.nucleotides' 'niben101scf07662_346776-351016' '(at1g28220 : 337.0) Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.; purine permease 3 (PUP3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 2 (TAIR:AT2G33750.2); Has 782 Blast hits to 771 proteins in 171 species: Archae - 1; Bacteria - 157; Metazoa - 97; Fungi - 2; Plants - 399; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (gnl|cdd|66803 : 91.0) no description available & (reliability: 674.0) & (original description: Putative PUP3, Description = Purine permease 3, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'niben101scf08167_496008-498355' '(at1g28230 : 115.0) Encodes a transporter that transports purines,cytokinins and other adenine derivatives. Expressed in the leaf hydathodes where it may be involved in re-uptake of cytokinins during guttation.; purine permease 1 (PUP1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 3 (TAIR:AT1G28220.1); Has 617 Blast hits to 607 proteins in 89 species: Archae - 4; Bacteria - 97; Metazoa - 10; Fungi - 14; Plants - 377; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative PUP1, Description = Purine permease 3, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'niben101scf08167_616841-620851' '(at1g28230 : 290.0) Encodes a transporter that transports purines,cytokinins and other adenine derivatives. Expressed in the leaf hydathodes where it may be involved in re-uptake of cytokinins during guttation.; purine permease 1 (PUP1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 3 (TAIR:AT1G28220.1); Has 617 Blast hits to 607 proteins in 89 species: Archae - 4; Bacteria - 97; Metazoa - 10; Fungi - 14; Plants - 377; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (gnl|cdd|66803 : 84.8) no description available & (reliability: 580.0) & (original description: Putative PUP1, Description = Purine permease 1, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'niben101scf08167_616982-620830' '(at1g28230 : 224.0) Encodes a transporter that transports purines,cytokinins and other adenine derivatives. Expressed in the leaf hydathodes where it may be involved in re-uptake of cytokinins during guttation.; purine permease 1 (PUP1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 3 (TAIR:AT1G28220.1); Has 617 Blast hits to 607 proteins in 89 species: Archae - 4; Bacteria - 97; Metazoa - 10; Fungi - 14; Plants - 377; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative PUP1, Description = Purine permease 3, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'niben101scf08433_161901-165887' '(at1g28220 : 253.0) Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.; purine permease 3 (PUP3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 2 (TAIR:AT2G33750.2); Has 782 Blast hits to 771 proteins in 171 species: Archae - 1; Bacteria - 157; Metazoa - 97; Fungi - 2; Plants - 399; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative PUP1, Description = Purine permease 3, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'niben101scf08478_72500-79381' '(gnl|cdd|86910 : 390.0) no description available & (gnl|cdd|38133 : 383.0) no description available & (at1g34470 : 356.0) Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF803) (TAIR:AT4G09640.1); Has 1275 Blast hits to 1251 proteins in 224 species: Archae - 0; Bacteria - 101; Metazoa - 420; Fungi - 374; Plants - 269; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (reliability: 712.0) & (original description: Putative At4g13800, Description = Probable magnesium transporter NIPA2, PFAM = PF05653)' T '34.10' 'transport.nucleotides' 'niben101scf10122_93450-96637' '(at1g30840 : 356.0) Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.; purine permease 4 (PUP4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 1 (TAIR:AT1G28230.1). & (gnl|cdd|66803 : 92.9) no description available & (reliability: 712.0) & (original description: Putative PUP4, Description = Probable purine permease 4, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'niben101scf10122_93507-96199' '(at1g30840 : 177.0) Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.; purine permease 4 (PUP4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 1 (TAIR:AT1G28230.1). & (reliability: 354.0) & (original description: Putative PUP4, Description = Putative purine permease 4, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'niben101scf12320_65530-76407' '(gnl|cdd|38133 : 382.0) no description available & (gnl|cdd|86910 : 380.0) no description available & (at1g34470 : 375.0) Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF803) (TAIR:AT4G09640.1); Has 1275 Blast hits to 1251 proteins in 224 species: Archae - 0; Bacteria - 101; Metazoa - 420; Fungi - 374; Plants - 269; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (reliability: 750.0) & (original description: Putative At1g34470, Description = Probable magnesium transporter NIPA3, PFAM = PF05653)' T '34.10' 'transport.nucleotides' 'niben101scf16413_357-3797' '(at1g44750 : 348.0) Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.; purine permease 11 (PUP11); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Drug/metabolite transporter superfamily protein (TAIR:AT4G08700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66803 : 101.0) no description available & (reliability: 696.0) & (original description: Putative PUP11, Description = Probable purine permease 11, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'niben101scf24315_18873-22827' '(at1g28220 : 325.0) Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.; purine permease 3 (PUP3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 2 (TAIR:AT2G33750.2); Has 782 Blast hits to 771 proteins in 171 species: Archae - 1; Bacteria - 157; Metazoa - 97; Fungi - 2; Plants - 399; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (gnl|cdd|66803 : 84.1) no description available & (reliability: 650.0) & (original description: Putative PUP3, Description = Purine permease 3, PFAM = PF16913)' T '34.10' 'transport.nucleotides' 'niben101scf34696_12493-14883' '(at4g18210 : 141.0) Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.; purine permease 10 (PUP10); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Drug/metabolite transporter superfamily protein (TAIR:AT4G18220.1); Has 419 Blast hits to 410 proteins in 44 species: Archae - 2; Bacteria - 21; Metazoa - 7; Fungi - 18; Plants - 360; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative PUP6, Description = Putative purine permease 10, PFAM = PF16913)' T '34.11' 'transport.NDP-sugars at the ER' 'nbv0.3scaffold13212_26479-32093' '(at4g09810 : 469.0) Nucleotide-sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT1G34020.1); Has 1601 Blast hits to 1598 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 311; Fungi - 204; Plants - 929; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|36654 : 220.0) no description available & (gnl|cdd|66803 : 94.5) no description available & (reliability: 872.0) & (original description: Putative CGL7, Description = Nucleotide-sugar transporter family protein, PFAM = PF03151)' T '34.11' 'transport.NDP-sugars at the ER' 'nbv0.3scaffold17878_18474-23236' '(at4g32270 : 139.0) Ubiquitin-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT5G25340.1); Has 84 Blast hits to 82 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative At4g32270, Description = U11/U12 small nuclear ribonucleoprotein 25 kDa, PFAM = )' T '34.11' 'transport.NDP-sugars at the ER' 'nbv0.5scaffold246_122155-143582' '(at5g59740 : 535.0) UDP-N-acetylglucosamine (UAA) transporter family; FUNCTIONS IN: galactose transmembrane transporter activity; INVOLVED IN: transmembrane transport; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: UDP-galactose transporter 5 (TAIR:AT3G46180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36794 : 372.0) no description available & (gnl|cdd|71878 : 257.0) no description available & (reliability: 1006.0) & (original description: Putative At5g59740, Description = UDP-galactose/UDP-glucose transporter 5B, PFAM = PF08449)' T '34.11' 'transport.NDP-sugars at the ER' 'nbv0.5scaffold2826_217293-238112' '(at5g59740 : 514.0) UDP-N-acetylglucosamine (UAA) transporter family; FUNCTIONS IN: galactose transmembrane transporter activity; INVOLVED IN: transmembrane transport; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: UDP-galactose transporter 5 (TAIR:AT3G46180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36794 : 364.0) no description available & (gnl|cdd|71878 : 241.0) no description available & (reliability: 966.0) & (original description: Putative sll, Description = Adenosine 3'-phospho 5'-phosphosulfate transporter 1, PFAM = PF08449)' T '34.11' 'transport.NDP-sugars at the ER' 'niben044scf00007577ctg005_1-2119' '(at2g13650 : 149.0) Encodes a Golgi-localized GDP-mannose transporter.; golgi nucleotide sugar transporter 1 (GONST1); FUNCTIONS IN: GDP-mannose transmembrane transporter activity, nucleotide-sugar transmembrane transporter activity; INVOLVED IN: GDP-mannose transport; LOCATED IN: Golgi apparatus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: golgi nucleotide sugar transporter 2 (TAIR:AT1G07290.1). & (gnl|cdd|36657 : 116.0) no description available & (reliability: 298.0) & (original description: Putative GMT, Description = GDP-mannose transporter GONST1, PFAM = )' T '34.11' 'transport.NDP-sugars at the ER' 'niben044scf00015350ctg006_1733-6612' '(at1g80060 : 110.0) Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G32270.1); Has 129 Blast hits to 129 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative glysoja_023252, Description = U11/U12 small nuclear ribonucleoprotein 25 kDa, PFAM = PF00240)' T '34.11' 'transport.NDP-sugars at the ER' 'niben044scf00024440ctg011_85-4405' '(at5g59740 : 123.0) UDP-N-acetylglucosamine (UAA) transporter family; FUNCTIONS IN: galactose transmembrane transporter activity; INVOLVED IN: transmembrane transport; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: UDP-galactose transporter 5 (TAIR:AT3G46180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative UTR5, Description = UDP-galactose/UDP-glucose transporter 5B, PFAM = PF08449)' T '34.11' 'transport.NDP-sugars at the ER' 'niben101scf01521_1486943-1499492' '(at1g14360 : 557.0) UDP-galactose transporter 3 (UTR3); FUNCTIONS IN: pyrimidine nucleotide sugar transmembrane transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: UDP-galactose transporter 1 (TAIR:AT2G02810.1); Has 1048 Blast hits to 1040 proteins in 233 species: Archae - 0; Bacteria - 0; Metazoa - 487; Fungi - 154; Plants - 232; Viruses - 0; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|36794 : 381.0) no description available & (gnl|cdd|71878 : 274.0) no description available & (reliability: 1114.0) & (original description: Putative UTR3, Description = UDP-galactose/UDP-glucose transporter 3, PFAM = PF08449)' T '34.11' 'transport.NDP-sugars at the ER' 'niben101scf01683_979994-984487' '(at4g09810 : 442.0) Nucleotide-sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT1G34020.1); Has 1601 Blast hits to 1598 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 311; Fungi - 204; Plants - 929; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|36654 : 224.0) no description available & (gnl|cdd|66803 : 97.2) no description available & (reliability: 870.0) & (original description: Putative CGL7, Description = Nucleotide-sugar transporter family protein, PFAM = PF03151)' T '34.11' 'transport.NDP-sugars at the ER' 'niben101scf03797_54910-60496' '(at1g14360 : 552.0) UDP-galactose transporter 3 (UTR3); FUNCTIONS IN: pyrimidine nucleotide sugar transmembrane transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: UDP-galactose transporter 1 (TAIR:AT2G02810.1); Has 1048 Blast hits to 1040 proteins in 233 species: Archae - 0; Bacteria - 0; Metazoa - 487; Fungi - 154; Plants - 232; Viruses - 0; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|36794 : 399.0) no description available & (gnl|cdd|71878 : 285.0) no description available & (reliability: 1104.0) & (original description: Putative UTR3, Description = UDP-galactose/UDP-glucose transporter 3, PFAM = PF08449)' T '34.11' 'transport.NDP-sugars at the ER' 'niben101scf05201_329300-338586' '(at2g13650 : 462.0) Encodes a Golgi-localized GDP-mannose transporter.; golgi nucleotide sugar transporter 1 (GONST1); FUNCTIONS IN: GDP-mannose transmembrane transporter activity, nucleotide-sugar transmembrane transporter activity; INVOLVED IN: GDP-mannose transport; LOCATED IN: Golgi apparatus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: golgi nucleotide sugar transporter 2 (TAIR:AT1G07290.1). & (gnl|cdd|36657 : 272.0) no description available & (gnl|cdd|34674 : 155.0) no description available & (reliability: 924.0) & (original description: Putative GONST1, Description = GDP-mannose transporter GONST1, PFAM = PF03151)' T '34.11' 'transport.NDP-sugars at the ER' 'niben101scf06348_157468-162244' '(at1g12600 : 495.0) UDP-N-acetylglucosamine (UAA) transporter family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: UDP-galactose transporter 2 (TAIR:AT4G23010.1); Has 1283 Blast hits to 1283 proteins in 272 species: Archae - 2; Bacteria - 86; Metazoa - 575; Fungi - 206; Plants - 224; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (gnl|cdd|36795 : 402.0) no description available & (gnl|cdd|71878 : 240.0) no description available & (reliability: 956.0) & (original description: Putative UTR4, Description = UDP-galactose/UDP-glucose transporter 4, PFAM = PF08449)' T '34.11' 'transport.NDP-sugars at the ER' 'niben101scf07515_147901-153252' '(at5g25340 : 122.0) Ubiquitin-like superfamily protein; BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G32270.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative At4g32270, Description = U11/U12 small nuclear ribonucleoprotein 25 kDa protein, PFAM = PF00240)' T '34.11' 'transport.NDP-sugars at the ER' 'niben101scf09649_141288-146476' '(at4g09810 : 450.0) Nucleotide-sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT1G34020.1); Has 1601 Blast hits to 1598 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 311; Fungi - 204; Plants - 929; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|36654 : 223.0) no description available & (gnl|cdd|66803 : 94.8) no description available & (reliability: 844.0) & (original description: Putative CGL7, Description = Nucleotide-sugar transporter family protein, PFAM = PF03151)' T '34.11' 'transport.NDP-sugars at the ER' 'niben101scf10409_223845-228666' '(at4g32270 : 139.0) Ubiquitin-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT5G25340.1); Has 84 Blast hits to 82 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative At4g32270, Description = U11/U12 small nuclear ribonucleoprotein 25 kDa, PFAM = )' T '34.11' 'transport.NDP-sugars at the ER' 'niben101scf12089_34759-40264' '(at1g12600 : 503.0) UDP-N-acetylglucosamine (UAA) transporter family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: UDP-galactose transporter 2 (TAIR:AT4G23010.1); Has 1283 Blast hits to 1283 proteins in 272 species: Archae - 2; Bacteria - 86; Metazoa - 575; Fungi - 206; Plants - 224; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (gnl|cdd|36795 : 412.0) no description available & (gnl|cdd|71878 : 231.0) no description available & (reliability: 988.0) & (original description: Putative UGT, Description = UDP-galactose/UDP-glucose transporter 4, PFAM = PF08449)' T '34.11' 'transport.NDP-sugars at the ER' 'niben101scf14714_53445-64906' '(at2g13650 : 462.0) Encodes a Golgi-localized GDP-mannose transporter.; golgi nucleotide sugar transporter 1 (GONST1); FUNCTIONS IN: GDP-mannose transmembrane transporter activity, nucleotide-sugar transmembrane transporter activity; INVOLVED IN: GDP-mannose transport; LOCATED IN: Golgi apparatus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: golgi nucleotide sugar transporter 2 (TAIR:AT1G07290.1). & (gnl|cdd|36657 : 273.0) no description available & (gnl|cdd|34674 : 155.0) no description available & (reliability: 924.0) & (original description: Putative GONST1, Description = GDP-mannose transporter GONST1, PFAM = PF03151)' T '34.11' 'transport.NDP-sugars at the ER' 'niben101scf17688_1-5173' '(at1g12600 : 510.0) UDP-N-acetylglucosamine (UAA) transporter family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: UDP-galactose transporter 2 (TAIR:AT4G23010.1); Has 1283 Blast hits to 1283 proteins in 272 species: Archae - 2; Bacteria - 86; Metazoa - 575; Fungi - 206; Plants - 224; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (gnl|cdd|36795 : 420.0) no description available & (gnl|cdd|71878 : 235.0) no description available & (reliability: 998.0) & (original description: Putative UTR4, Description = UDP-galactose/UDP-glucose transporter 4, PFAM = PF08449)' T '34.12' 'transport.metal' 'nbv0.3scaffold10506_8103-13087' '(at2g13620 : 490.0) member of Putative Na+/H+ antiporter family; cation/hydrogen exchanger 15 (CHX15); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 19 (TAIR:AT3G17630.1); Has 10260 Blast hits to 10223 proteins in 2141 species: Archae - 371; Bacteria - 8129; Metazoa - 51; Fungi - 171; Plants - 694; Viruses - 0; Other Eukaryotes - 844 (source: NCBI BLink). & (gnl|cdd|36863 : 407.0) no description available & (gnl|cdd|85173 : 106.0) no description available & (reliability: 980.0) & (original description: Putative CHX15, Description = Cation/H+ exchanger 3, PFAM = PF00999)' T '34.12' 'transport.metal' 'nbv0.3scaffold11954_2492-11398' '(at3g58060 : 550.0) Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity, efflux transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G79520.2); Has 4333 Blast hits to 4329 proteins in 1671 species: Archae - 143; Bacteria - 3530; Metazoa - 46; Fungi - 247; Plants - 204; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|36698 : 368.0) no description available & (gnl|cdd|85523 : 186.0) no description available & (reliability: 1100.0) & (original description: Putative MTPC3, Description = Putative metal tolerance protein C3, PFAM = PF16916;PF01545)' T '34.12' 'transport.metal' 'nbv0.3scaffold17733_7343-16790' '(at5g44790 : 1103.0) ATP dependent copper transporter vital for ethylene response pathway; RESPONSIVE-TO-ANTAGONIST 1 (RAN1); CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121), ATPase, P type, cation/copper-transporter (InterPro:IPR006403), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), Heavy-metal-associated, conserved site (InterPro:IPR017969), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), Copper ion-binding (InterPro:IPR006122), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: heavy metal atpase 5 (TAIR:AT1G63440.1); Has 47831 Blast hits to 34622 proteins in 3461 species: Archae - 1084; Bacteria - 31583; Metazoa - 5562; Fungi - 2713; Plants - 1975; Viruses - 3; Other Eukaryotes - 4911 (source: NCBI BLink). & (gnl|cdd|35428 : 839.0) no description available & (gnl|cdd|32399 : 695.0) no description available & (q6atv4|aca2_orysa : 126.0) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (reliability: 2206.0) & (original description: Putative HMA4, Description = P-ATPase family copper ion heavy metal translocating P-type ATPase-like protein, PFAM = PF00122;PF00702;PF00403)' T '34.12' 'transport.metal' 'nbv0.3scaffold18428_17962-33137' '(at4g37270 : 867.0) Encodes a P1B-type ATPases that is localized to the chloroplast envelope and is involved in the transport of Cu into chloroplasts. It is essential for growth under high light conditions.; heavy metal atpase 1 (HMA1); FUNCTIONS IN: copper-exporting ATPase activity, ATPase activity, calcium-transporting ATPase activity, zinc transporting ATPase activity, cadmium-transporting ATPase activity; INVOLVED IN: cellular copper ion homeostasis, calcium ion transport, response to toxin, zinc ion homeostasis, response to light intensity; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating (InterPro:IPR006404), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: heavy metal atpase 2 (TAIR:AT4G30110.1); Has 36740 Blast hits to 31592 proteins in 3081 species: Archae - 714; Bacteria - 24289; Metazoa - 3807; Fungi - 1794; Plants - 1612; Viruses - 8; Other Eukaryotes - 4516 (source: NCBI BLink). & (gnl|cdd|35428 : 563.0) no description available & (gnl|cdd|32399 : 458.0) no description available & (reliability: 1734.0) & (original description: Putative HMA1, Description = Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic, PFAM = PF00122;PF00702)' T '34.12' 'transport.metal' 'nbv0.3scaffold21889_10457-26140' '(at4g30110 : 874.0) encodes a protein similar to Zn-ATPase, a P1B-type ATPases transport zinc; heavy metal atpase 2 (HMA2); CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating (InterPro:IPR006404), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: heavy metal atpase 4 (TAIR:AT2G19110.1); Has 39991 Blast hits to 32019 proteins in 3203 species: Archae - 837; Bacteria - 26240; Metazoa - 4077; Fungi - 2516; Plants - 2059; Viruses - 5; Other Eukaryotes - 4257 (source: NCBI BLink). & (gnl|cdd|35428 : 688.0) no description available & (gnl|cdd|32399 : 595.0) no description available & (reliability: 1748.0) & (original description: Putative HMA3, Description = Cadmium/zinc-transporting ATPase HMA3, PFAM = PF00702;PF00122)' T '34.12' 'transport.metal' 'nbv0.3scaffold24692_23455-25832' '(at5g59030 : 84.7) encodes a putative copper transport protein that contains copper-binding motif and functionally complements in copper-transport defective yeast strains; copper transporter 1 (COPT1); CONTAINS InterPro DOMAIN/s: Ctr copper transporter (InterPro:IPR007274); BEST Arabidopsis thaliana protein match is: Ctr copper transporter family (TAIR:AT2G26975.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative CTr3, Description = Copper transporter, PFAM = PF04145;PF04145)' T '34.12' 'transport.metal' 'nbv0.3scaffold27187_6824-20244' '(at3g19490 : 254.0) member of Na+/H+ antiporter-Putative family; sodium:hydrogen antiporter 1 (NHD1); FUNCTIONS IN: potassium:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Na+/H+ antiporter NhaD-like (InterPro:IPR018390), Divalent ion symporter (InterPro:IPR004680); BEST Arabidopsis thaliana protein match is: Na+/H+ antiporter 2 (TAIR:AT1G49810.1); Has 2659 Blast hits to 2653 proteins in 794 species: Archae - 96; Bacteria - 1787; Metazoa - 39; Fungi - 48; Plants - 76; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (reliability: 508.0) & (original description: Putative nhaD, Description = Na+/H+ antiporter, PFAM = )' T '34.12' 'transport.metal' 'nbv0.3scaffold27863_3884-12288' '(at3g51860 : 493.0) cation exchanger 3 (CAX3); CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837), Calcium/proton exchanger superfamily (InterPro:IPR004798), Calcium/proton exchanger (InterPro:IPR004713); BEST Arabidopsis thaliana protein match is: cation exchanger 1 (TAIR:AT2G38170.1); Has 3567 Blast hits to 3405 proteins in 1022 species: Archae - 24; Bacteria - 2167; Metazoa - 14; Fungi - 725; Plants - 252; Viruses - 0; Other Eukaryotes - 385 (source: NCBI BLink). & (gnl|cdd|36611 : 490.0) no description available & (q769e5|cax1a_orysa : 446.0) Vacuolar cation/proton exchanger 1a (Ca(2+)/H(+) exchanger 1a) (OsCAX1a) - Oryza sativa (Rice) & (gnl|cdd|30736 : 224.0) no description available & (reliability: 986.0) & (original description: Putative CAX3, Description = Vacuolar cation/proton exchanger 3, PFAM = PF01699;PF01699)' T '34.12' 'transport.metal' 'nbv0.3scaffold29917_1859-17281' '(at4g37270 : 222.0) Encodes a P1B-type ATPases that is localized to the chloroplast envelope and is involved in the transport of Cu into chloroplasts. It is essential for growth under high light conditions.; heavy metal atpase 1 (HMA1); FUNCTIONS IN: copper-exporting ATPase activity, ATPase activity, calcium-transporting ATPase activity, zinc transporting ATPase activity, cadmium-transporting ATPase activity; INVOLVED IN: cellular copper ion homeostasis, calcium ion transport, response to toxin, zinc ion homeostasis, response to light intensity; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating (InterPro:IPR006404), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: heavy metal atpase 2 (TAIR:AT4G30110.1); Has 36740 Blast hits to 31592 proteins in 3081 species: Archae - 714; Bacteria - 24289; Metazoa - 3807; Fungi - 1794; Plants - 1612; Viruses - 8; Other Eukaryotes - 4516 (source: NCBI BLink). & (gnl|cdd|35428 : 169.0) no description available & (gnl|cdd|32399 : 138.0) no description available & (reliability: 444.0) & (original description: Putative hMA1, Description = Putative cadmium/zinc-transporting ATPase HMA1, PFAM = PF00122)' T '34.12' 'transport.metal' 'nbv0.3scaffold31499_22599-26318' '(at2g13620 : 131.0) member of Putative Na+/H+ antiporter family; cation/hydrogen exchanger 15 (CHX15); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 19 (TAIR:AT3G17630.1); Has 10260 Blast hits to 10223 proteins in 2141 species: Archae - 371; Bacteria - 8129; Metazoa - 51; Fungi - 171; Plants - 694; Viruses - 0; Other Eukaryotes - 844 (source: NCBI BLink). & (gnl|cdd|36863 : 114.0) no description available & (reliability: 262.0) & (original description: Putative PGSC0003DMG400021928, Description = Cation/hydrogen exchanger 15, PFAM = PF00999)' T '34.12' 'transport.metal' 'nbv0.3scaffold33122_15530-20363' '(at4g19690 : 271.0) Fe(II) transport protein (IRT1); iron-regulated transporter 1 (IRT1); FUNCTIONS IN: manganese ion transmembrane transporter activity, zinc ion transmembrane transporter activity, cadmium ion transmembrane transporter activity, copper uptake transmembrane transporter activity, iron ion transmembrane transporter activity; INVOLVED IN: in 11 processes; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: iron regulated transporter 2 (TAIR:AT4G19680.2); Has 2264 Blast hits to 2071 proteins in 344 species: Archae - 4; Bacteria - 222; Metazoa - 575; Fungi - 696; Plants - 525; Viruses - 0; Other Eukaryotes - 242 (source: NCBI BLink). & (gnl|cdd|36771 : 202.0) no description available & (gnl|cdd|86017 : 141.0) no description available & (reliability: 542.0) & (original description: Putative irt2, Description = Putative Fe (II) transporter, PFAM = PF02535)' T '34.12' 'transport.metal' 'nbv0.3scaffold46930_3658-9342' '(at2g01770 : 306.0) Encodes an iron transporter required for iron sequestration into vacuoles. Expressed in developing embryo and seed. Localized in the vacuolar membrane.; vacuolar iron transporter 1 (VIT1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217); Has 1947 Blast hits to 1945 proteins in 688 species: Archae - 106; Bacteria - 1196; Metazoa - 0; Fungi - 163; Plants - 191; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (gnl|cdd|29966 : 277.0) no description available & (gnl|cdd|39674 : 246.0) no description available & (reliability: 612.0) & (original description: Putative VIT1, Description = Vacuolar iron transporter 1, PFAM = PF01988)' T '34.12' 'transport.metal' 'nbv0.3scaffold47942_10877-14959' '(at5g19090 : 100.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT3G06130.2); Has 50176 Blast hits to 18818 proteins in 1086 species: Archae - 85; Bacteria - 11227; Metazoa - 17638; Fungi - 3230; Plants - 9788; Viruses - 1123; Other Eukaryotes - 7085 (source: NCBI BLink). & (gnl|cdd|36816 : 85.8) no description available & (reliability: 185.6) & (original description: Putative At1g23000, Description = Chloroplast-targeted copper chaperone, putative, PFAM = PF00403)' T '34.12' 'transport.metal' 'nbv0.3scaffold55424_1167-7938' '(at1g47240 : 766.0) Member of the NRAMP2 gene family of metal ion transporters.; NRAMP metal ion transporter 2 (NRAMP2); FUNCTIONS IN: inorganic anion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cellular metal ion homeostasis, metal ion transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Natural resistance-associated macrophage protein (InterPro:IPR001046); BEST Arabidopsis thaliana protein match is: natural resistance-associated macrophage protein 3 (TAIR:AT2G23150.1); Has 4906 Blast hits to 4864 proteins in 1503 species: Archae - 114; Bacteria - 3503; Metazoa - 369; Fungi - 260; Plants - 341; Viruses - 0; Other Eukaryotes - 319 (source: NCBI BLink). & (gnl|cdd|36505 : 576.0) no description available & (gnl|cdd|85534 : 448.0) no description available & (reliability: 1532.0) & (original description: Putative NRAMP2, Description = Metal transporter Nramp2, PFAM = PF01566)' T '34.12' 'transport.metal' 'nbv0.3scaffold57017_9341-12810' '(at1g31260 : 409.0) member of Fe(II) transporter isolog family; zinc transporter 10 precursor (ZIP10); FUNCTIONS IN: cation transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cation transport; LOCATED IN: endomembrane system, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: iron-regulated transporter 1 (TAIR:AT4G19690.2); Has 1726 Blast hits to 1578 proteins in 260 species: Archae - 0; Bacteria - 87; Metazoa - 331; Fungi - 622; Plants - 500; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink). & (gnl|cdd|36771 : 302.0) no description available & (gnl|cdd|86017 : 219.0) no description available & (reliability: 818.0) & (original description: Putative ZIP10, Description = Probable zinc transporter 10, PFAM = PF02535)' T '34.12' 'transport.metal' 'nbv0.3scaffold65021_4226-8983' '(at5g41610 : 979.0) member of Putative Na+/H+ antiporter family; ARABIDOPSIS THALIANA CATION/H+ EXCHANGER 18 (ATCHX18); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 17 (TAIR:AT4G23700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36863 : 719.0) no description available & (gnl|cdd|85173 : 208.0) no description available & (reliability: 1958.0) & (original description: Putative CHX18, Description = Cation/H(+) antiporter 18, PFAM = PF00999)' T '34.12' 'transport.metal' 'nbv0.3scaffold65134_3105-10523' '(at5g26820 : 501.0) Mutations in MAR1 confer resistance, while MAR1 overexpression causes hypersensitivity to multiple aminoglycoside antibiotics. Localizes to the chloroplast envelope. MAR1 may act as a plastid transporter involved in cellular iron homeostasis.; iron-regulated protein 3 (IREG3); CONTAINS InterPro DOMAIN/s: Ferroporti-1 (InterPro:IPR009716), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: iron regulated 2 (TAIR:AT5G03570.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1002.0) & (original description: Putative FPN3, Description = Solute carrier family 40 member 3, chloroplastic, PFAM = PF06963)' T '34.12' 'transport.metal' 'nbv0.3scaffold66067_1926-9312' '(at3g08650 : 748.0) ZIP metal ion transporter family; FUNCTIONS IN: metal ion transmembrane transporter activity; INVOLVED IN: metal ion transport, transmembrane transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: ZIP metal ion transporter family (TAIR:AT3G20870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37685 : 247.0) no description available & (gnl|cdd|30777 : 93.8) no description available & (reliability: 1496.0) & (original description: Putative gufA, Description = Zinc/iron permease, PFAM = PF02535)' T '34.12' 'transport.metal' 'nbv0.3scaffold84332_1-4233' '(gnl|cdd|36863 : 445.0) no description available & (at2g13620 : 387.0) member of Putative Na+/H+ antiporter family; cation/hydrogen exchanger 15 (CHX15); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 19 (TAIR:AT3G17630.1); Has 10260 Blast hits to 10223 proteins in 2141 species: Archae - 371; Bacteria - 8129; Metazoa - 51; Fungi - 171; Plants - 694; Viruses - 0; Other Eukaryotes - 844 (source: NCBI BLink). & (gnl|cdd|85173 : 112.0) no description available & (reliability: 774.0) & (original description: Putative MTR_5g074320, Description = Cation/H+ exchanger 3, PFAM = PF00999)' T '34.12' 'transport.metal' 'nbv0.3scaffold88030_79-5604' '(at1g05300 : 309.0) member of Fe(II) transporter isolog family; zinc transporter 5 precursor (ZIP5); FUNCTIONS IN: cation transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: response to zinc ion, cation transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: zinc transporter 3 precursor (TAIR:AT2G32270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36771 : 305.0) no description available & (gnl|cdd|86017 : 209.0) no description available & (reliability: 618.0) & (original description: Putative zip3, Description = Zinc transporter protein, PFAM = PF02535)' T '34.12' 'transport.metal' 'nbv0.5scaffold180_615248-620128' '(at5g53550 : 945.0) YELLOW STRIPE like 3 (YSL3); CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 2 (TAIR:AT5G24380.1). & (gnl|cdd|66819 : 356.0) no description available & (reliability: 1890.0) & (original description: Putative YSL3, Description = Metal-nicotianamine transporter YSL3, PFAM = PF03169)' T '34.12' 'transport.metal' 'nbv0.5scaffold237_457081-472740' '(at4g30110 : 875.0) encodes a protein similar to Zn-ATPase, a P1B-type ATPases transport zinc; heavy metal atpase 2 (HMA2); CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating (InterPro:IPR006404), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: heavy metal atpase 4 (TAIR:AT2G19110.1); Has 39991 Blast hits to 32019 proteins in 3203 species: Archae - 837; Bacteria - 26240; Metazoa - 4077; Fungi - 2516; Plants - 2059; Viruses - 5; Other Eukaryotes - 4257 (source: NCBI BLink). & (gnl|cdd|35428 : 687.0) no description available & (gnl|cdd|32399 : 596.0) no description available & (reliability: 1750.0) & (original description: Putative HMA3, Description = Cadmium/zinc-transporting ATPase HMA3, PFAM = PF00122;PF00702)' T '34.12' 'transport.metal' 'nbv0.5scaffold1815_112032-121500' '(at3g53720 : 558.0) member of Putative Na+/H+ antiporter family. Involved in the osmoregulation through K(+) fluxes and possibly pH modulation of an active endomembrane system in guard cells.; cation/H+ exchanger 20 (CHX20); CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 18 (TAIR:AT5G41610.1); Has 10038 Blast hits to 10006 proteins in 2135 species: Archae - 380; Bacteria - 7898; Metazoa - 11; Fungi - 167; Plants - 678; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). & (gnl|cdd|36863 : 445.0) no description available & (gnl|cdd|30823 : 176.0) no description available & (reliability: 1116.0) & (original description: Putative BnaA07g37760D, Description = BnaA07g37760D protein, PFAM = PF00999)' T '34.12' 'transport.metal' 'nbv0.5scaffold2568_77310-92494' '(at4g37270 : 868.0) Encodes a P1B-type ATPases that is localized to the chloroplast envelope and is involved in the transport of Cu into chloroplasts. It is essential for growth under high light conditions.; heavy metal atpase 1 (HMA1); FUNCTIONS IN: copper-exporting ATPase activity, ATPase activity, calcium-transporting ATPase activity, zinc transporting ATPase activity, cadmium-transporting ATPase activity; INVOLVED IN: cellular copper ion homeostasis, calcium ion transport, response to toxin, zinc ion homeostasis, response to light intensity; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating (InterPro:IPR006404), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: heavy metal atpase 2 (TAIR:AT4G30110.1); Has 36740 Blast hits to 31592 proteins in 3081 species: Archae - 714; Bacteria - 24289; Metazoa - 3807; Fungi - 1794; Plants - 1612; Viruses - 8; Other Eukaryotes - 4516 (source: NCBI BLink). & (gnl|cdd|35428 : 556.0) no description available & (gnl|cdd|32399 : 458.0) no description available & (reliability: 1736.0) & (original description: Putative HMA1, Description = Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic, PFAM = PF00702;PF00122)' T '34.12' 'transport.metal' 'nbv0.5scaffold3137_40217-46391' '(at2g30080 : 383.0) member of Fe(II) transporter isolog family. Gene expression is not regulated by iron, copper, or zinc deficiency or excess.; ZIP6; FUNCTIONS IN: cation transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cation transport, response to nematode; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: zinc transporter 7 precursor (TAIR:AT2G04032.1); Has 1739 Blast hits to 1619 proteins in 263 species: Archae - 0; Bacteria - 69; Metazoa - 337; Fungi - 628; Plants - 518; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|36771 : 232.0) no description available & (gnl|cdd|86017 : 181.0) no description available & (reliability: 766.0) & (original description: Putative ZIP6, Description = Zinc transporter 6, chloroplastic, PFAM = PF02535)' T '34.12' 'transport.metal' 'nbv0.5scaffold4037_60231-191145' '(at4g19680 : 186.0) encodes an iron transporter whose expression is induced by iron and zinc deficiency. Gene is specifically expressed in the external cell layers of the root subapical zone.; iron regulated transporter 2 (IRT2); FUNCTIONS IN: zinc ion transmembrane transporter activity, iron ion transmembrane transporter activity; INVOLVED IN: zinc ion transport, cellular response to iron ion starvation, iron ion transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: root epidermis; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: iron-regulated transporter 1 (TAIR:AT4G19690.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36771 : 140.0) no description available & (gnl|cdd|86017 : 89.2) no description available & (reliability: 372.0) & (original description: Putative irt2, Description = Zinc transporter protein, PFAM = PF02535)' T '34.12' 'transport.metal' 'nbv0.5scaffold4037_72758-90537' '(at1g31260 : 224.0) member of Fe(II) transporter isolog family; zinc transporter 10 precursor (ZIP10); FUNCTIONS IN: cation transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cation transport; LOCATED IN: endomembrane system, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: iron-regulated transporter 1 (TAIR:AT4G19690.2); Has 1726 Blast hits to 1578 proteins in 260 species: Archae - 0; Bacteria - 87; Metazoa - 331; Fungi - 622; Plants - 500; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink). & (gnl|cdd|36771 : 165.0) no description available & (gnl|cdd|86017 : 131.0) no description available & (reliability: 448.0) & (original description: Putative zip3, Description = Zinc transporter 5, PFAM = PF02535)' T '34.12' 'transport.metal' 'nbv0.5scaffold5253_110366-116258' '(at5g59520 : 358.0) encodes a metal ion transporter whose expression is regulated by copper.; ZRT/IRT-like protein 2 (ZIP2); FUNCTIONS IN: copper ion transmembrane transporter activity, zinc ion transmembrane transporter activity, transferase activity, transferring glycosyl groups; INVOLVED IN: zinc ion transport, response to copper ion; LOCATED IN: plasma membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: zinc transporter 11 precursor (TAIR:AT1G55910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36771 : 181.0) no description available & (gnl|cdd|86017 : 151.0) no description available & (reliability: 716.0) & (original description: Putative ZIP1, Description = Zinc transporter 1, PFAM = PF02535)' T '34.12' 'transport.metal' 'nbv0.5scaffold7740_24894-31222' '(gnl|cdd|36863 : 515.0) no description available & (at2g13620 : 468.0) member of Putative Na+/H+ antiporter family; cation/hydrogen exchanger 15 (CHX15); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 19 (TAIR:AT3G17630.1); Has 10260 Blast hits to 10223 proteins in 2141 species: Archae - 371; Bacteria - 8129; Metazoa - 51; Fungi - 171; Plants - 694; Viruses - 0; Other Eukaryotes - 844 (source: NCBI BLink). & (gnl|cdd|30823 : 115.0) no description available & (reliability: 936.0) & (original description: Putative RCOM_1447070, Description = Monovalent cation:proton antiporter, putative, PFAM = PF00999)' T '34.12' 'transport.metal' 'nbv0.5scaffold8293_30849-40181' '(at5g44790 : 1137.0) ATP dependent copper transporter vital for ethylene response pathway; RESPONSIVE-TO-ANTAGONIST 1 (RAN1); CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121), ATPase, P type, cation/copper-transporter (InterPro:IPR006403), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), Heavy-metal-associated, conserved site (InterPro:IPR017969), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), Copper ion-binding (InterPro:IPR006122), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: heavy metal atpase 5 (TAIR:AT1G63440.1); Has 47831 Blast hits to 34622 proteins in 3461 species: Archae - 1084; Bacteria - 31583; Metazoa - 5562; Fungi - 2713; Plants - 1975; Viruses - 3; Other Eukaryotes - 4911 (source: NCBI BLink). & (gnl|cdd|35428 : 743.0) no description available & (gnl|cdd|32399 : 517.0) no description available & (reliability: 2274.0) & (original description: Putative RAN1, Description = Copper-transporting ATPase RAN1, PFAM = PF00702;PF00122;PF00122;PF00403;PF00403)' T '34.12' 'transport.metal' 'niben044scf00000332ctg006_464-4581' '(at2g39450 : 241.0) Encodes a Golgi-localized manganese transporter that is involved in Mn tolerance. When expressed into yeast cells, this gene confer Mn2+ and Cu2+ tolerance.; MTP11; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G79520.1); Has 5154 Blast hits to 5150 proteins in 1777 species: Archae - 162; Bacteria - 4222; Metazoa - 44; Fungi - 292; Plants - 207; Viruses - 0; Other Eukaryotes - 227 (source: NCBI BLink). & (gnl|cdd|36698 : 148.0) no description available & (reliability: 482.0) & (original description: Putative MTP4, Description = Metal tolerance protein 5, PFAM = PF01545)' T '34.12' 'transport.metal' 'niben044scf00007814ctg001_14259-34769' '(at5g59520 : 311.0) encodes a metal ion transporter whose expression is regulated by copper.; ZRT/IRT-like protein 2 (ZIP2); FUNCTIONS IN: copper ion transmembrane transporter activity, zinc ion transmembrane transporter activity, transferase activity, transferring glycosyl groups; INVOLVED IN: zinc ion transport, response to copper ion; LOCATED IN: plasma membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: zinc transporter 11 precursor (TAIR:AT1G55910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36771 : 154.0) no description available & (gnl|cdd|86017 : 131.0) no description available & (reliability: 622.0) & (original description: Putative ZIP, Description = Zinc transporter 11, PFAM = PF02535;PF02535)' T '34.12' 'transport.metal' 'niben044scf00013290ctg002_9096-12361' '(at2g46800 : 481.0) Encodes a member of the zinc transporter (ZAT) and cation diffusion facilitator (CDF) families. It is expressed throughout the plant, especially in dividing, differentiating and expanding cells. The protein is localized to the vacuolar membrane. Mediates Zn ion homeostasis.; zinc transporter of Arabidopsis thaliana (ZAT); FUNCTIONS IN: zinc ion transmembrane transporter activity, inorganic anion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cellular zinc ion homeostasis, zinc ion transport, response to metal ion; LOCATED IN: vacuolar membrane, plasma membrane, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: metal tolerance protein A2 (TAIR:AT3G58810.1); Has 17747 Blast hits to 10591 proteins in 2218 species: Archae - 164; Bacteria - 10632; Metazoa - 2900; Fungi - 834; Plants - 528; Viruses - 26; Other Eukaryotes - 2663 (source: NCBI BLink). & (gnl|cdd|36695 : 411.0) no description available & (gnl|cdd|31423 : 123.0) no description available & (reliability: 962.0) & (original description: Putative MTP1, Description = Metal tolerance protein 1, PFAM = PF01545)' T '34.12' 'transport.metal' 'niben044scf00015385ctg012_19040-24619' '(at2g13620 : 605.0) member of Putative Na+/H+ antiporter family; cation/hydrogen exchanger 15 (CHX15); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 19 (TAIR:AT3G17630.1); Has 10260 Blast hits to 10223 proteins in 2141 species: Archae - 371; Bacteria - 8129; Metazoa - 51; Fungi - 171; Plants - 694; Viruses - 0; Other Eukaryotes - 844 (source: NCBI BLink). & (gnl|cdd|36863 : 534.0) no description available & (gnl|cdd|85173 : 166.0) no description available & (reliability: 1210.0) & (original description: Putative CHX15, Description = Cation/H(+) antiporter 15, PFAM = PF00999)' T '34.12' 'transport.metal' 'niben044scf00022084ctg001_4227-6726' '(at2g26975 : 103.0) Ctr copper transporter family; FUNCTIONS IN: copper ion transmembrane transporter activity; INVOLVED IN: copper ion transport; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Ctr copper transporter (InterPro:IPR007274); BEST Arabidopsis thaliana protein match is: copper transporter 2 (TAIR:AT3G46900.1); Has 384 Blast hits to 384 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 136; Fungi - 49; Plants - 163; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative CTr2, Description = Copper transporter, PFAM = PF04145;PF04145)' T '34.12' 'transport.metal' 'niben044scf00023138ctg004_364-22236' '(at3g19490 : 489.0) member of Na+/H+ antiporter-Putative family; sodium:hydrogen antiporter 1 (NHD1); FUNCTIONS IN: potassium:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Na+/H+ antiporter NhaD-like (InterPro:IPR018390), Divalent ion symporter (InterPro:IPR004680); BEST Arabidopsis thaliana protein match is: Na+/H+ antiporter 2 (TAIR:AT1G49810.1); Has 2659 Blast hits to 2653 proteins in 794 species: Archae - 96; Bacteria - 1787; Metazoa - 39; Fungi - 48; Plants - 76; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (gnl|cdd|29730 : 154.0) no description available & (reliability: 978.0) & (original description: Putative nhaD, Description = Citrate transporter, PFAM = PF03600)' T '34.12' 'transport.metal' 'niben044scf00023195ctg004_108-6309' '(gnl|cdd|36611 : 378.0) no description available & (at3g51860 : 358.0) cation exchanger 3 (CAX3); CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837), Calcium/proton exchanger superfamily (InterPro:IPR004798), Calcium/proton exchanger (InterPro:IPR004713); BEST Arabidopsis thaliana protein match is: cation exchanger 1 (TAIR:AT2G38170.1); Has 3567 Blast hits to 3405 proteins in 1022 species: Archae - 24; Bacteria - 2167; Metazoa - 14; Fungi - 725; Plants - 252; Viruses - 0; Other Eukaryotes - 385 (source: NCBI BLink). & (q769e5|cax1a_orysa : 314.0) Vacuolar cation/proton exchanger 1a (Ca(2+)/H(+) exchanger 1a) (OsCAX1a) - Oryza sativa (Rice) & (gnl|cdd|30736 : 191.0) no description available & (reliability: 716.0) & (original description: Putative cax, Description = Vacuolar cation/proton exchanger 3, PFAM = PF01699;PF01699)' T '34.12' 'transport.metal' 'niben044scf00025183ctg008_2118-7521' '(at5g24380 : 963.0) closest Arabidopsis homolog of Zea maize metal-phytosiderophore/metal-nicotianamine transporter ZmYS1; YELLOW STRIPE like 2 (YSL2); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, response to zinc ion, response to iron ion; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 3 (TAIR:AT5G53550.2); Has 1729 Blast hits to 1686 proteins in 542 species: Archae - 19; Bacteria - 859; Metazoa - 0; Fungi - 253; Plants - 459; Viruses - 1; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|66819 : 358.0) no description available & (reliability: 1926.0) & (original description: Putative YSL1, Description = Metal-nicotianamine transporter YSL1, PFAM = PF03169)' T '34.12' 'transport.metal' 'niben044scf00028407ctg002_14783-20314' '(at5g24380 : 975.0) closest Arabidopsis homolog of Zea maize metal-phytosiderophore/metal-nicotianamine transporter ZmYS1; YELLOW STRIPE like 2 (YSL2); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, response to zinc ion, response to iron ion; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 3 (TAIR:AT5G53550.2); Has 1729 Blast hits to 1686 proteins in 542 species: Archae - 19; Bacteria - 859; Metazoa - 0; Fungi - 253; Plants - 459; Viruses - 1; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|66819 : 354.0) no description available & (reliability: 1950.0) & (original description: Putative YSL2, Description = Metal-nicotianamine transporter YSL2, PFAM = PF03169)' T '34.12' 'transport.metal' 'niben044scf00032249ctg003_33043-37963' '(at3g52080 : 676.0) encodes a cation:proton exchanger expressed in pollen; cation/hydrogen exchanger 28 (chx28); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: membrane; EXPRESSED IN: male gametophyte, flower, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/hydrogen exchanger 15 (TAIR:AT2G13620.1); Has 2845 Blast hits to 2827 proteins in 865 species: Archae - 172; Bacteria - 1868; Metazoa - 0; Fungi - 124; Plants - 540; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|36863 : 380.0) no description available & (gnl|cdd|30823 : 106.0) no description available & (reliability: 1352.0) & (original description: Putative CHX28, Description = Cation/H(+) antiporter 28, PFAM = PF00999)' T '34.12' 'transport.metal' 'niben044scf00038482ctg005_5236-9907' '(at2g04620 : 493.0) Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity, efflux transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36697 : 199.0) no description available & (gnl|cdd|31423 : 132.0) no description available & (reliability: 986.0) & (original description: Putative znt5, Description = Zinc transporter 5, PFAM = PF01545)' T '34.12' 'transport.metal' 'niben044scf00038953ctg006_1696-4276' '(at4g37270 : 226.0) Encodes a P1B-type ATPases that is localized to the chloroplast envelope and is involved in the transport of Cu into chloroplasts. It is essential for growth under high light conditions.; heavy metal atpase 1 (HMA1); FUNCTIONS IN: copper-exporting ATPase activity, ATPase activity, calcium-transporting ATPase activity, zinc transporting ATPase activity, cadmium-transporting ATPase activity; INVOLVED IN: cellular copper ion homeostasis, calcium ion transport, response to toxin, zinc ion homeostasis, response to light intensity; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating (InterPro:IPR006404), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: heavy metal atpase 2 (TAIR:AT4G30110.1); Has 36740 Blast hits to 31592 proteins in 3081 species: Archae - 714; Bacteria - 24289; Metazoa - 3807; Fungi - 1794; Plants - 1612; Viruses - 8; Other Eukaryotes - 4516 (source: NCBI BLink). & (gnl|cdd|35428 : 105.0) no description available & (reliability: 452.0) & (original description: Putative HMA1, Description = Putative cadmium/zinc-transporting ATPase HMA1, chloroplastic, PFAM = )' T '34.12' 'transport.metal' 'niben044scf00041117ctg015_4401-9164' '(at5g41610 : 986.0) member of Putative Na+/H+ antiporter family; ARABIDOPSIS THALIANA CATION/H+ EXCHANGER 18 (ATCHX18); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 17 (TAIR:AT4G23700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36863 : 723.0) no description available & (gnl|cdd|85173 : 208.0) no description available & (reliability: 1972.0) & (original description: Putative CHX18, Description = Cation/H(+) antiporter 18, PFAM = PF00999)' T '34.12' 'transport.metal' 'niben044scf00047746ctg002_1231-7170' '(at4g24120 : 901.0) Member of a small family of oligopeptide transporters similar to the yellow stripe locus of maize (ZmYS1).; YELLOW STRIPE like 1 (YSL1); CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 3 (TAIR:AT5G53550.2); Has 1803 Blast hits to 1757 proteins in 564 species: Archae - 19; Bacteria - 895; Metazoa - 0; Fungi - 312; Plants - 459; Viruses - 1; Other Eukaryotes - 117 (source: NCBI BLink). & (gnl|cdd|66819 : 318.0) no description available & (reliability: 1802.0) & (original description: Putative YSL1, Description = Metal-nicotianamine transporter YSL1, PFAM = PF03169)' T '34.12' 'transport.metal' 'niben044scf00058699ctg001_1-4402' '(at2g04620 : 444.0) Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity, efflux transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36697 : 312.0) no description available & (gnl|cdd|31423 : 133.0) no description available & (reliability: 888.0) & (original description: Putative znt5, Description = Zinc transporter 5, PFAM = PF01545)' T '34.12' 'transport.metal' 'niben044scf00058945ctg000_5525-11047' '(at1g06970 : 560.0) member of Putative Na+/H+ antiporter family; cation/hydrogen exchanger 14 (CHX14); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: Cation/hydrogen exchanger family protein (TAIR:AT2G30240.1); Has 4532 Blast hits to 4506 proteins in 1259 species: Archae - 234; Bacteria - 3237; Metazoa - 0; Fungi - 116; Plants - 574; Viruses - 0; Other Eukaryotes - 371 (source: NCBI BLink). & (gnl|cdd|36863 : 543.0) no description available & (gnl|cdd|85173 : 137.0) no description available & (reliability: 1120.0) & (original description: Putative Ccrd_010290, Description = Cation/H+ exchanger, PFAM = PF00999)' T '34.12' 'transport.metal' 'niben101ctg13873_1-2232' '(at2g04032 : 380.0) zinc transporter 7 precursor (ZIP7); FUNCTIONS IN: cation transmembrane transporter activity, zinc ion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cation transport, zinc ion transport, metal ion transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: iron-regulated transporter 1 (TAIR:AT4G19690.2); Has 1848 Blast hits to 1741 proteins in 306 species: Archae - 0; Bacteria - 134; Metazoa - 385; Fungi - 602; Plants - 510; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|36771 : 301.0) no description available & (gnl|cdd|86017 : 207.0) no description available & (reliability: 760.0) & (original description: Putative IRT1, Description = Fe(2+) transport protein 1, PFAM = PF02535)' T '34.12' 'transport.metal' 'niben101ctg15582_1-2448' '(at5g20650 : 142.0) encodes a member of copper transporter family and functionally complements a high affinity copper transporter mutant in yeast; copper transporter 5 (COPT5); FUNCTIONS IN: copper ion transmembrane transporter activity, high affinity copper ion transmembrane transporter activity; INVOLVED IN: copper ion transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ctr copper transporter (InterPro:IPR007274); BEST Arabidopsis thaliana protein match is: Ctr copper transporter family (TAIR:AT2G26975.1); Has 497 Blast hits to 497 proteins in 140 species: Archae - 0; Bacteria - 0; Metazoa - 217; Fungi - 69; Plants - 156; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|38596 : 99.2) no description available & (gnl|cdd|67748 : 80.8) no description available & (reliability: 284.0) & (original description: Putative COPT5, Description = Copper transporter 5, PFAM = PF04145)' T '34.12' 'transport.metal' 'niben101scf00056_691639-695403' '(at2g30080 : 371.0) member of Fe(II) transporter isolog family. Gene expression is not regulated by iron, copper, or zinc deficiency or excess.; ZIP6; FUNCTIONS IN: cation transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cation transport, response to nematode; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: zinc transporter 7 precursor (TAIR:AT2G04032.1); Has 1739 Blast hits to 1619 proteins in 263 species: Archae - 0; Bacteria - 69; Metazoa - 337; Fungi - 628; Plants - 518; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink). & (gnl|cdd|36771 : 235.0) no description available & (gnl|cdd|86017 : 178.0) no description available & (reliability: 742.0) & (original description: Putative ZIP6, Description = Zinc transporter 6, chloroplastic, PFAM = PF02535)' T '34.12' 'transport.metal' 'niben101scf00276_287466-289936' '(at5g59030 : 123.0) encodes a putative copper transport protein that contains copper-binding motif and functionally complements in copper-transport defective yeast strains; copper transporter 1 (COPT1); CONTAINS InterPro DOMAIN/s: Ctr copper transporter (InterPro:IPR007274); BEST Arabidopsis thaliana protein match is: Ctr copper transporter family (TAIR:AT2G26975.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38596 : 92.7) no description available & (gnl|cdd|67748 : 80.4) no description available & (reliability: 246.0) & (original description: Putative COPT6, Description = Copper transporter 6, PFAM = PF04145;PF04145)' T '34.12' 'transport.metal' 'niben101scf00370_248662-253954' '(at5g19090 : 97.1) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT3G06130.2); Has 50176 Blast hits to 18818 proteins in 1086 species: Archae - 85; Bacteria - 11227; Metazoa - 17638; Fungi - 3230; Plants - 9788; Viruses - 1123; Other Eukaryotes - 7085 (source: NCBI BLink). & (gnl|cdd|36816 : 85.4) no description available & (reliability: 181.0) & (original description: Putative At1g23000, Description = Chloroplast-targeted copper chaperone, putative, PFAM = PF00403)' T '34.12' 'transport.metal' 'niben101scf00401_209364-214480' '(at5g37060 : 655.0) member of Putative Na+/H+ antiporter family; cation/H+ exchanger 24 (CHX24); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 25 (TAIR:AT5G58460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36863 : 569.0) no description available & (gnl|cdd|85173 : 141.0) no description available & (reliability: 1310.0) & (original description: Putative CHX24, Description = Cation/H(+) antiporter 24, PFAM = PF00999)' T '34.12' 'transport.metal' 'niben101scf00572_60805-67030' '(at5g41610 : 992.0) member of Putative Na+/H+ antiporter family; ARABIDOPSIS THALIANA CATION/H+ EXCHANGER 18 (ATCHX18); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 17 (TAIR:AT4G23700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36863 : 701.0) no description available & (gnl|cdd|30823 : 196.0) no description available & (reliability: 1984.0) & (original description: Putative CHX18, Description = Cation/H(+) antiporter 18, PFAM = PF00999)' T '34.12' 'transport.metal' 'niben101scf00713_468231-479532' '(at3g53720 : 768.0) member of Putative Na+/H+ antiporter family. Involved in the osmoregulation through K(+) fluxes and possibly pH modulation of an active endomembrane system in guard cells.; cation/H+ exchanger 20 (CHX20); CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 18 (TAIR:AT5G41610.1); Has 10038 Blast hits to 10006 proteins in 2135 species: Archae - 380; Bacteria - 7898; Metazoa - 11; Fungi - 167; Plants - 678; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). & (gnl|cdd|36863 : 565.0) no description available & (gnl|cdd|30823 : 200.0) no description available & (reliability: 1536.0) & (original description: Putative CHX20, Description = Cation/H(+) antiporter 20, PFAM = PF00999)' T '34.12' 'transport.metal' 'niben101scf00799_229829-236966' '(at1g15960 : 554.0) member of Nramp2 family; NRAMP metal ion transporter 6 (NRAMP6); FUNCTIONS IN: inorganic anion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cellular metal ion homeostasis, metal ion transport; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Natural resistance-associated macrophage protein (InterPro:IPR001046); BEST Arabidopsis thaliana protein match is: natural resistance-associated macrophage protein 1 (TAIR:AT1G80830.1); Has 5518 Blast hits to 5467 proteins in 1679 species: Archae - 118; Bacteria - 4110; Metazoa - 356; Fungi - 271; Plants - 336; Viruses - 0; Other Eukaryotes - 327 (source: NCBI BLink). & (gnl|cdd|36505 : 472.0) no description available & (gnl|cdd|85534 : 411.0) no description available & (reliability: 1108.0) & (original description: Putative NRAMP4, Description = Metal transporter Nramp4, PFAM = PF01566)' T '34.12' 'transport.metal' 'niben101scf00819_66011-71075' '(gnl|cdd|36863 : 504.0) no description available & (at2g13620 : 462.0) member of Putative Na+/H+ antiporter family; cation/hydrogen exchanger 15 (CHX15); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 19 (TAIR:AT3G17630.1); Has 10260 Blast hits to 10223 proteins in 2141 species: Archae - 371; Bacteria - 8129; Metazoa - 51; Fungi - 171; Plants - 694; Viruses - 0; Other Eukaryotes - 844 (source: NCBI BLink). & (gnl|cdd|85173 : 131.0) no description available & (reliability: 924.0) & (original description: Putative M569_15964, Description = Cation proton exchanger, PFAM = PF00999)' T '34.12' 'transport.metal' 'niben101scf00869_696372-703890' '(at3g08650 : 744.0) ZIP metal ion transporter family; FUNCTIONS IN: metal ion transmembrane transporter activity; INVOLVED IN: metal ion transport, transmembrane transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: ZIP metal ion transporter family (TAIR:AT3G20870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37685 : 243.0) no description available & (gnl|cdd|30777 : 94.2) no description available & (reliability: 1488.0) & (original description: Putative gufA, Description = Zinc/iron permease, PFAM = PF02535)' T '34.12' 'transport.metal' 'niben101scf00918_535328-544810' '(at1g16310 : 536.0) Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G79520.1); Has 5067 Blast hits to 5063 proteins in 1838 species: Archae - 163; Bacteria - 4116; Metazoa - 44; Fungi - 281; Plants - 207; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink). & (gnl|cdd|36698 : 390.0) no description available & (gnl|cdd|85523 : 200.0) no description available & (reliability: 1072.0) & (original description: Putative MTP9, Description = Metal transport protein 9, PFAM = PF16916;PF01545)' T '34.12' 'transport.metal' 'niben101scf01052_898095-913754' '(at4g30110 : 872.0) encodes a protein similar to Zn-ATPase, a P1B-type ATPases transport zinc; heavy metal atpase 2 (HMA2); CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating (InterPro:IPR006404), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: heavy metal atpase 4 (TAIR:AT2G19110.1); Has 39991 Blast hits to 32019 proteins in 3203 species: Archae - 837; Bacteria - 26240; Metazoa - 4077; Fungi - 2516; Plants - 2059; Viruses - 5; Other Eukaryotes - 4257 (source: NCBI BLink). & (gnl|cdd|35428 : 688.0) no description available & (gnl|cdd|32399 : 597.0) no description available & (reliability: 1744.0) & (original description: Putative HMA3, Description = Cadmium/zinc-transporting ATPase HMA3, PFAM = PF00702;PF00122)' T '34.12' 'transport.metal' 'niben101scf01061_759816-767272' '(at2g16800 : 357.0) high-affinity nickel-transport family protein; FUNCTIONS IN: nickel ion transmembrane transporter activity, metal ion binding; INVOLVED IN: nickel ion transport, transmembrane transport, metal ion transport; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nickel/cobalt transporter, high-affinity (InterPro:IPR011541); BEST Arabidopsis thaliana protein match is: high-affinity nickel-transport family protein (TAIR:AT4G35080.1); Has 403 Blast hits to 399 proteins in 86 species: Archae - 11; Bacteria - 116; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink). & (gnl|cdd|86449 : 101.0) no description available & (reliability: 714.0) & (original description: Putative ZN, Description = Chloroplast zebra-necrosis protein, PFAM = PF13386)' T '34.12' 'transport.metal' 'niben101scf01163_27766-39067' '(at1g29000 : 133.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G50740.1); Has 54430 Blast hits to 26412 proteins in 1651 species: Archae - 256; Bacteria - 5932; Metazoa - 19157; Fungi - 5076; Plants - 2696; Viruses - 508; Other Eukaryotes - 20805 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative PGSC0003DMG400006507, Description = Metal ion binding protein, putative, PFAM = PF00403;PF00403)' T '34.12' 'transport.metal' 'niben101scf01169_496004-532678' '(at4g37270 : 488.0) Encodes a P1B-type ATPases that is localized to the chloroplast envelope and is involved in the transport of Cu into chloroplasts. It is essential for growth under high light conditions.; heavy metal atpase 1 (HMA1); FUNCTIONS IN: copper-exporting ATPase activity, ATPase activity, calcium-transporting ATPase activity, zinc transporting ATPase activity, cadmium-transporting ATPase activity; INVOLVED IN: cellular copper ion homeostasis, calcium ion transport, response to toxin, zinc ion homeostasis, response to light intensity; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating (InterPro:IPR006404), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: heavy metal atpase 2 (TAIR:AT4G30110.1); Has 36740 Blast hits to 31592 proteins in 3081 species: Archae - 714; Bacteria - 24289; Metazoa - 3807; Fungi - 1794; Plants - 1612; Viruses - 8; Other Eukaryotes - 4516 (source: NCBI BLink). & (gnl|cdd|35428 : 330.0) no description available & (gnl|cdd|32399 : 293.0) no description available & (reliability: 976.0) & (original description: Putative hma1, Description = Putative P1B-type metal ATPase, PFAM = PF00702)' T '34.12' 'transport.metal' 'niben101scf01274_796851-799168' '(at1g79520 : 190.0) Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G16310.1). & (gnl|cdd|36698 : 152.0) no description available & (gnl|cdd|85523 : 84.1) no description available & (reliability: 380.0) & (original description: Putative MTP9, Description = Metal tolerance protein 9, PFAM = PF16916)' T '34.12' 'transport.metal' 'niben101scf01300_32383-37148' '(at2g04620 : 493.0) Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity, efflux transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36697 : 199.0) no description available & (gnl|cdd|31423 : 131.0) no description available & (reliability: 986.0) & (original description: Putative St123, Description = 123.pep, PFAM = PF01545)' T '34.12' 'transport.metal' 'niben101scf01329_3917-11352' '(at3g51860 : 502.0) cation exchanger 3 (CAX3); CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837), Calcium/proton exchanger superfamily (InterPro:IPR004798), Calcium/proton exchanger (InterPro:IPR004713); BEST Arabidopsis thaliana protein match is: cation exchanger 1 (TAIR:AT2G38170.1); Has 3567 Blast hits to 3405 proteins in 1022 species: Archae - 24; Bacteria - 2167; Metazoa - 14; Fungi - 725; Plants - 252; Viruses - 0; Other Eukaryotes - 385 (source: NCBI BLink). & (gnl|cdd|36611 : 494.0) no description available & (q769e5|cax1a_orysa : 455.0) Vacuolar cation/proton exchanger 1a (Ca(2+)/H(+) exchanger 1a) (OsCAX1a) - Oryza sativa (Rice) & (gnl|cdd|30736 : 224.0) no description available & (reliability: 1004.0) & (original description: Putative CAX1, Description = Vacuolar cation/proton exchanger 1, PFAM = PF01699;PF01699)' T '34.12' 'transport.metal' 'niben101scf01350_218968-236859' '(at3g19490 : 364.0) member of Na+/H+ antiporter-Putative family; sodium:hydrogen antiporter 1 (NHD1); FUNCTIONS IN: potassium:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Na+/H+ antiporter NhaD-like (InterPro:IPR018390), Divalent ion symporter (InterPro:IPR004680); BEST Arabidopsis thaliana protein match is: Na+/H+ antiporter 2 (TAIR:AT1G49810.1); Has 2659 Blast hits to 2653 proteins in 794 species: Archae - 96; Bacteria - 1787; Metazoa - 39; Fungi - 48; Plants - 76; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (gnl|cdd|29730 : 118.0) no description available & (reliability: 728.0) & (original description: Putative NhaD1, Description = Na+/H+ antiporter, PFAM = PF03600)' T '34.12' 'transport.metal' 'niben101scf01576_447425-450678' '(at2g46800 : 493.0) Encodes a member of the zinc transporter (ZAT) and cation diffusion facilitator (CDF) families. It is expressed throughout the plant, especially in dividing, differentiating and expanding cells. The protein is localized to the vacuolar membrane. Mediates Zn ion homeostasis.; zinc transporter of Arabidopsis thaliana (ZAT); FUNCTIONS IN: zinc ion transmembrane transporter activity, inorganic anion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cellular zinc ion homeostasis, zinc ion transport, response to metal ion; LOCATED IN: vacuolar membrane, plasma membrane, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: metal tolerance protein A2 (TAIR:AT3G58810.1); Has 17747 Blast hits to 10591 proteins in 2218 species: Archae - 164; Bacteria - 10632; Metazoa - 2900; Fungi - 834; Plants - 528; Viruses - 26; Other Eukaryotes - 2663 (source: NCBI BLink). & (gnl|cdd|36695 : 418.0) no description available & (gnl|cdd|31423 : 123.0) no description available & (reliability: 986.0) & (original description: Putative MTP1, Description = Metal tolerance protein 1, PFAM = PF01545)' T '34.12' 'transport.metal' 'niben101scf01616_449532-454389' '(at1g16310 : 546.0) Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G79520.1); Has 5067 Blast hits to 5063 proteins in 1838 species: Archae - 163; Bacteria - 4116; Metazoa - 44; Fungi - 281; Plants - 207; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink). & (gnl|cdd|36698 : 407.0) no description available & (gnl|cdd|85523 : 198.0) no description available & (reliability: 1092.0) & (original description: Putative MTP10, Description = Metal tolerance protein 10, PFAM = PF16916;PF01545)' T '34.12' 'transport.metal' 'niben101scf01721_60795-66271' '(gnl|cdd|36863 : 577.0) no description available & (at3g44900 : 473.0) member of Putative Na+/H+ antiporter family; cation/H+ exchanger 4 (CHX4); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: embryo, male gametophyte, leaf, pollen tube; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123), Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 3 (TAIR:AT5G22900.1); Has 3718 Blast hits to 3692 proteins in 1177 species: Archae - 142; Bacteria - 2765; Metazoa - 0; Fungi - 116; Plants - 604; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|30823 : 135.0) no description available & (reliability: 946.0) & (original description: Putative , Description = Putative cation/H(+) antiporter 11-like, PFAM = PF00999)' T '34.12' 'transport.metal' 'niben101scf01731_977891-982575' '(at2g13620 : 1115.0) member of Putative Na+/H+ antiporter family; cation/hydrogen exchanger 15 (CHX15); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 19 (TAIR:AT3G17630.1); Has 10260 Blast hits to 10223 proteins in 2141 species: Archae - 371; Bacteria - 8129; Metazoa - 51; Fungi - 171; Plants - 694; Viruses - 0; Other Eukaryotes - 844 (source: NCBI BLink). & (gnl|cdd|36863 : 763.0) no description available & (gnl|cdd|85173 : 194.0) no description available & (reliability: 2230.0) & (original description: Putative CHX15, Description = Cation/H(+) antiporter 15, PFAM = PF00999)' T '34.12' 'transport.metal' 'niben101scf01740_693362-699563' '(at5g24380 : 870.0) closest Arabidopsis homolog of Zea maize metal-phytosiderophore/metal-nicotianamine transporter ZmYS1; YELLOW STRIPE like 2 (YSL2); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, response to zinc ion, response to iron ion; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 3 (TAIR:AT5G53550.2); Has 1729 Blast hits to 1686 proteins in 542 species: Archae - 19; Bacteria - 859; Metazoa - 0; Fungi - 253; Plants - 459; Viruses - 1; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|66819 : 323.0) no description available & (reliability: 1740.0) & (original description: Putative YSL3, Description = Metal-nicotianamine transporter YSL3, PFAM = PF03169;PF03169)' T '34.12' 'transport.metal' 'niben101scf01749_68300-79463' '(at1g63440 : 1023.0) The Arabidopsis P-type ATPase HMA5 is involved in Cu detoxification. hma5 mutant plants exhibit Cu hypersensitivity, which is especially dramatic in roots where HMA5 is mostly expressed.; heavy metal atpase 5 (HMA5); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: detoxification of copper ion, response to copper ion; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121), ATPase, P type, cation/copper-transporter (InterPro:IPR006403), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), Heavy-metal-associated, conserved site (InterPro:IPR017969), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1) (TAIR:AT5G44790.1); Has 47061 Blast hits to 34034 proteins in 3459 species: Archae - 1020; Bacteria - 31793; Metazoa - 4958; Fungi - 2589; Plants - 1873; Viruses - 3; Other Eukaryotes - 4825 (source: NCBI BLink). & (gnl|cdd|35428 : 907.0) no description available & (gnl|cdd|32399 : 695.0) no description available & (q08436|pma3_nicpl : 96.7) Plasma membrane ATPase 3 (EC 3.6.3.6) (Proton pump 3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 2046.0) & (original description: Putative RAN1, Description = Copper-transporting ATPase RAN1, PFAM = PF00403;PF00403;PF00122;PF00702)' T '34.12' 'transport.metal' 'niben101scf01749_167952-181093' '(at3g20870 : 375.0) ZIP metal ion transporter family; FUNCTIONS IN: metal ion transmembrane transporter activity; INVOLVED IN: metal ion transport, transmembrane transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: ZIP metal ion transporter family (TAIR:AT3G08650.2); Has 3662 Blast hits to 3630 proteins in 1201 species: Archae - 124; Bacteria - 2163; Metazoa - 678; Fungi - 116; Plants - 147; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink). & (gnl|cdd|81323 : 202.0) no description available & (gnl|cdd|37685 : 128.0) no description available & (reliability: 750.0) & (original description: Putative ZTP29, Description = Zinc transporter ZTP29, PFAM = PF02535)' T '34.12' 'transport.metal' 'niben101scf01785_831114-837353' '(at5g41610 : 952.0) member of Putative Na+/H+ antiporter family; ARABIDOPSIS THALIANA CATION/H+ EXCHANGER 18 (ATCHX18); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 17 (TAIR:AT4G23700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36863 : 707.0) no description available & (gnl|cdd|30823 : 195.0) no description available & (reliability: 1904.0) & (original description: Putative CHX18, Description = Cation/H(+) antiporter 18, PFAM = PF00999)' T '34.12' 'transport.metal' 'niben101scf01888_926031-933980' '(at1g15960 : 556.0) member of Nramp2 family; NRAMP metal ion transporter 6 (NRAMP6); FUNCTIONS IN: inorganic anion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cellular metal ion homeostasis, metal ion transport; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Natural resistance-associated macrophage protein (InterPro:IPR001046); BEST Arabidopsis thaliana protein match is: natural resistance-associated macrophage protein 1 (TAIR:AT1G80830.1); Has 5518 Blast hits to 5467 proteins in 1679 species: Archae - 118; Bacteria - 4110; Metazoa - 356; Fungi - 271; Plants - 336; Viruses - 0; Other Eukaryotes - 327 (source: NCBI BLink). & (gnl|cdd|36505 : 477.0) no description available & (gnl|cdd|85534 : 414.0) no description available & (reliability: 1112.0) & (original description: Putative NRAMP5, Description = Metal transporter Nramp5, PFAM = PF01566)' T '34.12' 'transport.metal' 'niben101scf01951_216192-218686' '(at5g59030 : 115.0) encodes a putative copper transport protein that contains copper-binding motif and functionally complements in copper-transport defective yeast strains; copper transporter 1 (COPT1); CONTAINS InterPro DOMAIN/s: Ctr copper transporter (InterPro:IPR007274); BEST Arabidopsis thaliana protein match is: Ctr copper transporter family (TAIR:AT2G26975.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38596 : 86.1) no description available & (gnl|cdd|67748 : 80.4) no description available & (reliability: 230.0) & (original description: Putative COPT6, Description = Copper transporter 6, PFAM = PF04145;PF04145)' T '34.12' 'transport.metal' 'niben101scf02042_387063-397910' '(at2g47830 : 417.0) Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity, efflux transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT3G58060.1); Has 9392 Blast hits to 9378 proteins in 2385 species: Archae - 234; Bacteria - 7700; Metazoa - 297; Fungi - 408; Plants - 275; Viruses - 0; Other Eukaryotes - 478 (source: NCBI BLink). & (gnl|cdd|36698 : 234.0) no description available & (gnl|cdd|30402 : 218.0) no description available & (reliability: 834.0) & (original description: Putative MTPC1, Description = Metal tolerance protein C1, PFAM = PF16916;PF01545)' T '34.12' 'transport.metal' 'niben101scf02072_52855-58764' '(at3g58060 : 511.0) Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity, efflux transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G79520.2); Has 4333 Blast hits to 4329 proteins in 1671 species: Archae - 143; Bacteria - 3530; Metazoa - 46; Fungi - 247; Plants - 204; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|36698 : 352.0) no description available & (gnl|cdd|85523 : 180.0) no description available & (reliability: 1022.0) & (original description: Putative MTP4, Description = Metal tolerance protein 4, PFAM = PF01545;PF16916)' T '34.12' 'transport.metal' 'niben101scf02072_54106-56061' '(at3g58060 : 172.0) Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity, efflux transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G79520.2); Has 4333 Blast hits to 4329 proteins in 1671 species: Archae - 143; Bacteria - 3530; Metazoa - 46; Fungi - 247; Plants - 204; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|36698 : 116.0) no description available & (reliability: 344.0) & (original description: Putative MTP3, Description = Putative metal tolerance protein C3, PFAM = PF01545)' T '34.12' 'transport.metal' 'niben101scf02107_659022-664295' '(at2g13620 : 608.0) member of Putative Na+/H+ antiporter family; cation/hydrogen exchanger 15 (CHX15); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 19 (TAIR:AT3G17630.1); Has 10260 Blast hits to 10223 proteins in 2141 species: Archae - 371; Bacteria - 8129; Metazoa - 51; Fungi - 171; Plants - 694; Viruses - 0; Other Eukaryotes - 844 (source: NCBI BLink). & (gnl|cdd|36863 : 525.0) no description available & (gnl|cdd|85173 : 168.0) no description available & (reliability: 1216.0) & (original description: Putative CHX15, Description = Cation/H(+) antiporter 15, PFAM = PF00999)' T '34.12' 'transport.metal' 'niben101scf02427_129147-135468' '(at1g47240 : 762.0) Member of the NRAMP2 gene family of metal ion transporters.; NRAMP metal ion transporter 2 (NRAMP2); FUNCTIONS IN: inorganic anion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cellular metal ion homeostasis, metal ion transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Natural resistance-associated macrophage protein (InterPro:IPR001046); BEST Arabidopsis thaliana protein match is: natural resistance-associated macrophage protein 3 (TAIR:AT2G23150.1); Has 4906 Blast hits to 4864 proteins in 1503 species: Archae - 114; Bacteria - 3503; Metazoa - 369; Fungi - 260; Plants - 341; Viruses - 0; Other Eukaryotes - 319 (source: NCBI BLink). & (gnl|cdd|36505 : 570.0) no description available & (gnl|cdd|85534 : 444.0) no description available & (reliability: 1524.0) & (original description: Putative NRAMP2, Description = Metal transporter Nramp2, PFAM = PF01566)' T '34.12' 'transport.metal' 'niben101scf02461_399216-402610' '(at3g12750 : 330.0) A member of Zrt- and Irt-related protein (ZIP) family. transcript is induced in response to zinc deficiency in the root.; zinc transporter 1 precursor (ZIP1); FUNCTIONS IN: zinc ion transmembrane transporter activity; INVOLVED IN: response to zinc ion, zinc ion transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: zinc transporter 5 precursor (TAIR:AT1G05300.1); Has 2022 Blast hits to 1850 proteins in 281 species: Archae - 0; Bacteria - 109; Metazoa - 565; Fungi - 630; Plants - 510; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink). & (gnl|cdd|36771 : 278.0) no description available & (gnl|cdd|86017 : 191.0) no description available & (reliability: 660.0) & (original description: Putative ZIP1, Description = Zinc transporter 1, PFAM = PF02535)' T '34.12' 'transport.metal' 'niben101scf02480_100258-105385' '(at1g10970 : 430.0) A member of Zrt- and Irt-related protein (ZIP) family. transcript is induced in response to zinc deficiency in the root and shoot. Expression is regulated by copper, but response to copper deficiency is detected only after three weeks of deficiency.; zinc transporter 4 precursor (ZIP4); CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: iron regulated transporter 3 (TAIR:AT1G60960.1); Has 2241 Blast hits to 2085 proteins in 351 species: Archae - 0; Bacteria - 278; Metazoa - 580; Fungi - 588; Plants - 521; Viruses - 0; Other Eukaryotes - 274 (source: NCBI BLink). & (gnl|cdd|36771 : 294.0) no description available & (gnl|cdd|86017 : 200.0) no description available & (reliability: 860.0) & (original description: Putative ZIP4, Description = Zinc transporter 4, chloroplastic, PFAM = PF02535)' T '34.12' 'transport.metal' 'niben101scf02513_109269-140460' '(at4g33520 : 1083.0) Encodes a putative metal-transporting P-type ATPase.; P-type ATP-ase 1 (PAA1); FUNCTIONS IN: copper ion transmembrane transporter activity, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: photosynthetic electron transport chain; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type copper-transporter (InterPro:IPR001756), Heavy metal transport/detoxification protein (InterPro:IPR006121), ATPase, P type, cation/copper-transporter (InterPro:IPR006403), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), Heavy-metal-associated, conserved site (InterPro:IPR017969), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: P-type ATPase of Arabidopsis 2 (TAIR:AT5G21930.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35428 : 717.0) no description available & (gnl|cdd|32399 : 631.0) no description available & (reliability: 2166.0) & (original description: Putative PAA1, Description = Copper-transporting ATPase PAA1, chloroplastic, PFAM = PF00122;PF00403;PF00702)' T '34.12' 'transport.metal' 'niben101scf02541_830121-832570' '(at2g26975 : 100.0) Ctr copper transporter family; FUNCTIONS IN: copper ion transmembrane transporter activity; INVOLVED IN: copper ion transport; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Ctr copper transporter (InterPro:IPR007274); BEST Arabidopsis thaliana protein match is: copper transporter 2 (TAIR:AT3G46900.1); Has 384 Blast hits to 384 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 136; Fungi - 49; Plants - 163; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|38596 : 93.8) no description available & (gnl|cdd|67748 : 80.8) no description available & (reliability: 200.0) & (original description: Putative COPT6, Description = Copper transporter 6, PFAM = PF04145;PF04145)' T '34.12' 'transport.metal' 'niben101scf02621_614032-621273' '(at2g16800 : 333.0) high-affinity nickel-transport family protein; FUNCTIONS IN: nickel ion transmembrane transporter activity, metal ion binding; INVOLVED IN: nickel ion transport, transmembrane transport, metal ion transport; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nickel/cobalt transporter, high-affinity (InterPro:IPR011541); BEST Arabidopsis thaliana protein match is: high-affinity nickel-transport family protein (TAIR:AT4G35080.1); Has 403 Blast hits to 399 proteins in 86 species: Archae - 11; Bacteria - 116; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink). & (gnl|cdd|86449 : 101.0) no description available & (reliability: 666.0) & (original description: Putative ZN, Description = Chloroplast zebra-necrosis protein, PFAM = )' T '34.12' 'transport.metal' 'niben101scf02807_464145-469191' '(at1g05300 : 311.0) member of Fe(II) transporter isolog family; zinc transporter 5 precursor (ZIP5); FUNCTIONS IN: cation transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: response to zinc ion, cation transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: zinc transporter 3 precursor (TAIR:AT2G32270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36771 : 302.0) no description available & (gnl|cdd|86017 : 204.0) no description available & (reliability: 622.0) & (original description: Putative zip3, Description = Zinc transporter protein, PFAM = PF02535)' T '34.12' 'transport.metal' 'niben101scf03018_974819-982014' '(at3g52080 : 680.0) encodes a cation:proton exchanger expressed in pollen; cation/hydrogen exchanger 28 (chx28); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: membrane; EXPRESSED IN: male gametophyte, flower, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/hydrogen exchanger 15 (TAIR:AT2G13620.1); Has 2845 Blast hits to 2827 proteins in 865 species: Archae - 172; Bacteria - 1868; Metazoa - 0; Fungi - 124; Plants - 540; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|36863 : 405.0) no description available & (gnl|cdd|30823 : 120.0) no description available & (reliability: 1360.0) & (original description: Putative CHX28, Description = Cation/H(+) antiporter 28, PFAM = PF00999)' T '34.12' 'transport.metal' 'niben101scf03039_406462-413744' '(at1g51610 : 587.0) Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity, efflux transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); Has 3094 Blast hits to 3092 proteins in 1095 species: Archae - 127; Bacteria - 2543; Metazoa - 129; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 250 (source: NCBI BLink). & (gnl|cdd|38013 : 447.0) no description available & (gnl|cdd|85523 : 123.0) no description available & (reliability: 1174.0) & (original description: Putative v1g207889, Description = Predicted protein, PFAM = PF01545)' T '34.12' 'transport.metal' 'niben101scf03093_101987-109944' '(at1g63440 : 1397.0) The Arabidopsis P-type ATPase HMA5 is involved in Cu detoxification. hma5 mutant plants exhibit Cu hypersensitivity, which is especially dramatic in roots where HMA5 is mostly expressed.; heavy metal atpase 5 (HMA5); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: detoxification of copper ion, response to copper ion; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121), ATPase, P type, cation/copper-transporter (InterPro:IPR006403), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), Heavy-metal-associated, conserved site (InterPro:IPR017969), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1) (TAIR:AT5G44790.1); Has 47061 Blast hits to 34034 proteins in 3459 species: Archae - 1020; Bacteria - 31793; Metazoa - 4958; Fungi - 2589; Plants - 1873; Viruses - 3; Other Eukaryotes - 4825 (source: NCBI BLink). & (gnl|cdd|35428 : 1005.0) no description available & (gnl|cdd|32399 : 723.0) no description available & (q6atv4|aca2_orysa : 110.0) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (reliability: 2794.0) & (original description: Putative HMA5, Description = Probable copper-transporting ATPase HMA5, PFAM = PF00403;PF00403;PF00702;PF00122)' T '34.12' 'transport.metal' 'niben101scf03147_674174-677151' '(at2g37920 : 194.0) embryo defective 1513 (emb1513); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G07750.1); Has 60 Blast hits to 60 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|35563 : 122.0) no description available & (reliability: 388.0) & (original description: Putative emb1513, Description = Copper ion transmembrane transporters, PFAM = )' T '34.12' 'transport.metal' 'niben101scf03156_519376-524824' '(gnl|cdd|36863 : 568.0) no description available & (at2g13620 : 543.0) member of Putative Na+/H+ antiporter family; cation/hydrogen exchanger 15 (CHX15); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 19 (TAIR:AT3G17630.1); Has 10260 Blast hits to 10223 proteins in 2141 species: Archae - 371; Bacteria - 8129; Metazoa - 51; Fungi - 171; Plants - 694; Viruses - 0; Other Eukaryotes - 844 (source: NCBI BLink). & (gnl|cdd|85173 : 143.0) no description available & (reliability: 1086.0) & (original description: Putative glysoja_028320, Description = Cation/H(+) antiporter 15, PFAM = PF00999)' T '34.12' 'transport.metal' 'niben101scf03188_601179-616003' '(at4g37270 : 868.0) Encodes a P1B-type ATPases that is localized to the chloroplast envelope and is involved in the transport of Cu into chloroplasts. It is essential for growth under high light conditions.; heavy metal atpase 1 (HMA1); FUNCTIONS IN: copper-exporting ATPase activity, ATPase activity, calcium-transporting ATPase activity, zinc transporting ATPase activity, cadmium-transporting ATPase activity; INVOLVED IN: cellular copper ion homeostasis, calcium ion transport, response to toxin, zinc ion homeostasis, response to light intensity; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating (InterPro:IPR006404), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: heavy metal atpase 2 (TAIR:AT4G30110.1); Has 36740 Blast hits to 31592 proteins in 3081 species: Archae - 714; Bacteria - 24289; Metazoa - 3807; Fungi - 1794; Plants - 1612; Viruses - 8; Other Eukaryotes - 4516 (source: NCBI BLink). & (gnl|cdd|35428 : 563.0) no description available & (gnl|cdd|32399 : 465.0) no description available & (reliability: 1736.0) & (original description: Putative HMA1, Description = Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic, PFAM = PF00702;PF00122)' T '34.12' 'transport.metal' 'niben101scf03188_608426-613660' '(at4g37270 : 222.0) Encodes a P1B-type ATPases that is localized to the chloroplast envelope and is involved in the transport of Cu into chloroplasts. It is essential for growth under high light conditions.; heavy metal atpase 1 (HMA1); FUNCTIONS IN: copper-exporting ATPase activity, ATPase activity, calcium-transporting ATPase activity, zinc transporting ATPase activity, cadmium-transporting ATPase activity; INVOLVED IN: cellular copper ion homeostasis, calcium ion transport, response to toxin, zinc ion homeostasis, response to light intensity; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating (InterPro:IPR006404), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: heavy metal atpase 2 (TAIR:AT4G30110.1); Has 36740 Blast hits to 31592 proteins in 3081 species: Archae - 714; Bacteria - 24289; Metazoa - 3807; Fungi - 1794; Plants - 1612; Viruses - 8; Other Eukaryotes - 4516 (source: NCBI BLink). & (gnl|cdd|35428 : 171.0) no description available & (gnl|cdd|32399 : 140.0) no description available & (reliability: 444.0) & (original description: Putative hMA1, Description = Putative cadmium/zinc-transporting ATPase HMA1, PFAM = PF00122)' T '34.12' 'transport.metal' 'niben101scf03226_417844-424244' '(at5g41610 : 1001.0) member of Putative Na+/H+ antiporter family; ARABIDOPSIS THALIANA CATION/H+ EXCHANGER 18 (ATCHX18); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 17 (TAIR:AT4G23700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36863 : 742.0) no description available & (gnl|cdd|85173 : 208.0) no description available & (reliability: 2002.0) & (original description: Putative CHX18, Description = Cation/H(+) antiporter 18, PFAM = PF00999)' T '34.12' 'transport.metal' 'niben101scf03403_374359-376829' '(at5g59030 : 120.0) encodes a putative copper transport protein that contains copper-binding motif and functionally complements in copper-transport defective yeast strains; copper transporter 1 (COPT1); CONTAINS InterPro DOMAIN/s: Ctr copper transporter (InterPro:IPR007274); BEST Arabidopsis thaliana protein match is: Ctr copper transporter family (TAIR:AT2G26975.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38596 : 86.9) no description available & (reliability: 240.0) & (original description: Putative COPT6, Description = Copper transporter 6, PFAM = PF04145;PF04145)' T '34.12' 'transport.metal' 'niben101scf03491_27218-29631' '(at2g26975 : 101.0) Ctr copper transporter family; FUNCTIONS IN: copper ion transmembrane transporter activity; INVOLVED IN: copper ion transport; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Ctr copper transporter (InterPro:IPR007274); BEST Arabidopsis thaliana protein match is: copper transporter 2 (TAIR:AT3G46900.1); Has 384 Blast hits to 384 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 136; Fungi - 49; Plants - 163; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative CTr2, Description = Copper transporter, PFAM = PF04145;PF04145)' T '34.12' 'transport.metal' 'niben101scf03706_13502-21116' '(at2g47600 : 710.0) Encodes a magnesium/proton exchanger, member of putative Na+/Ca2+ antiporter gene family; magnesium/proton exchanger (MHX); CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837); Has 2505 Blast hits to 2112 proteins in 583 species: Archae - 12; Bacteria - 368; Metazoa - 1819; Fungi - 7; Plants - 67; Viruses - 0; Other Eukaryotes - 232 (source: NCBI BLink). & (gnl|cdd|36520 : 282.0) no description available & (reliability: 1420.0) & (original description: Putative MHX, Description = Magnesium/proton exchanger, PFAM = PF01699;PF01699)' T '34.12' 'transport.metal' 'niben101scf03794_99458-106452' '(at2g39450 : 594.0) Encodes a Golgi-localized manganese transporter that is involved in Mn tolerance. When expressed into yeast cells, this gene confer Mn2+ and Cu2+ tolerance.; MTP11; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G79520.1); Has 5154 Blast hits to 5150 proteins in 1777 species: Archae - 162; Bacteria - 4222; Metazoa - 44; Fungi - 292; Plants - 207; Viruses - 0; Other Eukaryotes - 227 (source: NCBI BLink). & (gnl|cdd|36698 : 420.0) no description available & (gnl|cdd|85523 : 202.0) no description available & (reliability: 1188.0) & (original description: Putative MTP5, Description = Metal tolerance protein 5, PFAM = PF01545;PF16916)' T '34.12' 'transport.metal' 'niben101scf03894_237263-242941' '(at4g24120 : 900.0) Member of a small family of oligopeptide transporters similar to the yellow stripe locus of maize (ZmYS1).; YELLOW STRIPE like 1 (YSL1); CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 3 (TAIR:AT5G53550.2); Has 1803 Blast hits to 1757 proteins in 564 species: Archae - 19; Bacteria - 895; Metazoa - 0; Fungi - 312; Plants - 459; Viruses - 1; Other Eukaryotes - 117 (source: NCBI BLink). & (gnl|cdd|66819 : 324.0) no description available & (reliability: 1800.0) & (original description: Putative YSL1, Description = Metal-nicotianamine transporter YSL1, PFAM = PF03169)' T '34.12' 'transport.metal' 'niben101scf04995_1324940-1332902' '(at1g47240 : 715.0) Member of the NRAMP2 gene family of metal ion transporters.; NRAMP metal ion transporter 2 (NRAMP2); FUNCTIONS IN: inorganic anion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cellular metal ion homeostasis, metal ion transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Natural resistance-associated macrophage protein (InterPro:IPR001046); BEST Arabidopsis thaliana protein match is: natural resistance-associated macrophage protein 3 (TAIR:AT2G23150.1); Has 4906 Blast hits to 4864 proteins in 1503 species: Archae - 114; Bacteria - 3503; Metazoa - 369; Fungi - 260; Plants - 341; Viruses - 0; Other Eukaryotes - 319 (source: NCBI BLink). & (gnl|cdd|36505 : 565.0) no description available & (gnl|cdd|85534 : 438.0) no description available & (reliability: 1430.0) & (original description: Putative dmt, Description = Natural resistance-associated macrophage protein 1, PFAM = PF01566)' T '34.12' 'transport.metal' 'niben101scf05372_56250-59371' '(gnl|cdd|36695 : 353.0) no description available & (at2g29410 : 346.0) member of Zinc transporter (ZAT) family; metal tolerance protein B1 (MTPB1); FUNCTIONS IN: efflux transmembrane transporter activity, zinc ion transmembrane transporter activity, inorganic anion transmembrane transporter activity; INVOLVED IN: zinc ion transport, cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: zinc transporter of Arabidopsis thaliana (TAIR:AT2G46800.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|31423 : 207.0) no description available & (reliability: 692.0) & (original description: Putative MTPB, Description = Metal tolerance protein B, PFAM = PF01545)' T '34.12' 'transport.metal' 'niben101scf05378_124862-131574' '(at3g12750 : 297.0) A member of Zrt- and Irt-related protein (ZIP) family. transcript is induced in response to zinc deficiency in the root.; zinc transporter 1 precursor (ZIP1); FUNCTIONS IN: zinc ion transmembrane transporter activity; INVOLVED IN: response to zinc ion, zinc ion transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: zinc transporter 5 precursor (TAIR:AT1G05300.1); Has 2022 Blast hits to 1850 proteins in 281 species: Archae - 0; Bacteria - 109; Metazoa - 565; Fungi - 630; Plants - 510; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink). & (gnl|cdd|36771 : 271.0) no description available & (gnl|cdd|86017 : 192.0) no description available & (reliability: 594.0) & (original description: Putative zip3, Description = Zinc transporter protein, PFAM = PF02535)' T '34.12' 'transport.metal' 'niben101scf05535_59339-66500' '(at1g16310 : 554.0) Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G79520.1); Has 5067 Blast hits to 5063 proteins in 1838 species: Archae - 163; Bacteria - 4116; Metazoa - 44; Fungi - 281; Plants - 207; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink). & (gnl|cdd|36698 : 413.0) no description available & (gnl|cdd|85523 : 211.0) no description available & (reliability: 1108.0) & (original description: Putative MTP10, Description = Metal tolerance protein 10, PFAM = PF01545;PF16916)' T '34.12' 'transport.metal' 'niben101scf05708_38295-42909' '(at2g37920 : 194.0) embryo defective 1513 (emb1513); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G07750.1); Has 60 Blast hits to 60 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|35563 : 114.0) no description available & (reliability: 388.0) & (original description: Putative emb1513, Description = Copper ion transmembrane transporters, PFAM = )' T '34.12' 'transport.metal' 'niben101scf05711_209471-219479' '(at3g58060 : 524.0) Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity, efflux transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G79520.2); Has 4333 Blast hits to 4329 proteins in 1671 species: Archae - 143; Bacteria - 3530; Metazoa - 46; Fungi - 247; Plants - 204; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|36698 : 365.0) no description available & (gnl|cdd|85523 : 184.0) no description available & (reliability: 1048.0) & (original description: Putative MTP4, Description = Metal tolerance protein 4, PFAM = PF16916;PF01545)' T '34.12' 'transport.metal' 'niben101scf05772_59376-63301' '(at1g55910 : 375.0) member of Putative zinc transporter ZIP2 - like family; zinc transporter 11 precursor (ZIP11); FUNCTIONS IN: cation transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cation transport, metal ion transport, transmembrane transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: ZRT/IRT-like protein 2 (TAIR:AT5G59520.1); Has 1903 Blast hits to 1874 proteins in 427 species: Archae - 10; Bacteria - 369; Metazoa - 451; Fungi - 381; Plants - 446; Viruses - 0; Other Eukaryotes - 246 (source: NCBI BLink). & (gnl|cdd|36771 : 190.0) no description available & (gnl|cdd|86017 : 151.0) no description available & (reliability: 750.0) & (original description: Putative ZIP11, Description = Zinc transporter 11, PFAM = PF02535)' T '34.12' 'transport.metal' 'niben101scf05881_116162-151092' '(gnl|cdd|36611 : 460.0) no description available & (at3g51860 : 441.0) cation exchanger 3 (CAX3); CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837), Calcium/proton exchanger superfamily (InterPro:IPR004798), Calcium/proton exchanger (InterPro:IPR004713); BEST Arabidopsis thaliana protein match is: cation exchanger 1 (TAIR:AT2G38170.1); Has 3567 Blast hits to 3405 proteins in 1022 species: Archae - 24; Bacteria - 2167; Metazoa - 14; Fungi - 725; Plants - 252; Viruses - 0; Other Eukaryotes - 385 (source: NCBI BLink). & (q769e5|cax1a_orysa : 403.0) Vacuolar cation/proton exchanger 1a (Ca(2+)/H(+) exchanger 1a) (OsCAX1a) - Oryza sativa (Rice) & (gnl|cdd|30736 : 228.0) no description available & (reliability: 882.0) & (original description: Putative cax, Description = CAX, PFAM = PF01699;PF01699)' T '34.12' 'transport.metal' 'niben101scf06369_148293-153975' '(at1g63440 : 1131.0) The Arabidopsis P-type ATPase HMA5 is involved in Cu detoxification. hma5 mutant plants exhibit Cu hypersensitivity, which is especially dramatic in roots where HMA5 is mostly expressed.; heavy metal atpase 5 (HMA5); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: detoxification of copper ion, response to copper ion; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121), ATPase, P type, cation/copper-transporter (InterPro:IPR006403), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), Heavy-metal-associated, conserved site (InterPro:IPR017969), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1) (TAIR:AT5G44790.1); Has 47061 Blast hits to 34034 proteins in 3459 species: Archae - 1020; Bacteria - 31793; Metazoa - 4958; Fungi - 2589; Plants - 1873; Viruses - 3; Other Eukaryotes - 4825 (source: NCBI BLink). & (gnl|cdd|35428 : 913.0) no description available & (gnl|cdd|32399 : 698.0) no description available & (q6atv4|aca2_orysa : 90.9) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (reliability: 2262.0) & (original description: Putative copA, Description = Copper-exporting P-type ATPase A, PFAM = PF00122;PF00403;PF00403;PF00702)' T '34.12' 'transport.metal' 'niben101scf06499_55431-62486' '(at1g51610 : 595.0) Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity, efflux transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); Has 3094 Blast hits to 3092 proteins in 1095 species: Archae - 127; Bacteria - 2543; Metazoa - 129; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 250 (source: NCBI BLink). & (gnl|cdd|38013 : 447.0) no description available & (gnl|cdd|85523 : 121.0) no description available & (reliability: 1190.0) & (original description: Putative MTPC4, Description = Metal tolerance protein C4, PFAM = PF01545)' T '34.12' 'transport.metal' 'niben101scf06976_499336-511592' '(at1g80830 : 748.0) Thought to be involved in iron homeostasis. Induced in leaves in response to iron deficiency. Transgenic plants accumulate toxic levels of iron. Gene complements yeast iron uptake mutants.; natural resistance-associated macrophage protein 1 (NRAMP1); CONTAINS InterPro DOMAIN/s: Natural resistance-associated macrophage protein (InterPro:IPR001046); BEST Arabidopsis thaliana protein match is: NRAMP metal ion transporter 6 (TAIR:AT1G15960.1); Has 5566 Blast hits to 5511 proteins in 1695 species: Archae - 118; Bacteria - 4154; Metazoa - 357; Fungi - 273; Plants - 337; Viruses - 0; Other Eukaryotes - 327 (source: NCBI BLink). & (gnl|cdd|36505 : 531.0) no description available & (gnl|cdd|80723 : 426.0) no description available & (reliability: 1496.0) & (original description: Putative NRAMP1, Description = Metal transporter Nramp1, PFAM = PF01566)' T '34.12' 'transport.metal' 'niben101scf07121_201400-220691' '(at3g12100 : 497.0) Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity, efflux transmembrane transporter activity; INVOLVED IN: cation transport, response to nematode; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT2G04620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36697 : 234.0) no description available & (gnl|cdd|31423 : 156.0) no description available & (reliability: 994.0) & (original description: Putative MTPC2, Description = Metal tolerance protein C2, PFAM = PF01545)' T '34.12' 'transport.metal' 'niben101scf07182_99502-105585' '(at3g58060 : 488.0) Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity, efflux transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G79520.2); Has 4333 Blast hits to 4329 proteins in 1671 species: Archae - 143; Bacteria - 3530; Metazoa - 46; Fungi - 247; Plants - 204; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink). & (gnl|cdd|36698 : 356.0) no description available & (gnl|cdd|85523 : 183.0) no description available & (reliability: 976.0) & (original description: Putative MTP4, Description = Metal tolerance protein 4, PFAM = PF16916;PF01545)' T '34.12' 'transport.metal' 'niben101scf08368_56013-61426' '(at2g01770 : 329.0) Encodes an iron transporter required for iron sequestration into vacuoles. Expressed in developing embryo and seed. Localized in the vacuolar membrane.; vacuolar iron transporter 1 (VIT1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217); Has 1947 Blast hits to 1945 proteins in 688 species: Archae - 106; Bacteria - 1196; Metazoa - 0; Fungi - 163; Plants - 191; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (gnl|cdd|29966 : 281.0) no description available & (gnl|cdd|39674 : 250.0) no description available & (reliability: 658.0) & (original description: Putative VIT1, Description = Vacuolar iron transporter 1, PFAM = PF01988)' T '34.12' 'transport.metal' 'niben101scf08566_429498-433795' '(at4g33520 : 131.0) Encodes a putative metal-transporting P-type ATPase.; P-type ATP-ase 1 (PAA1); FUNCTIONS IN: copper ion transmembrane transporter activity, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: photosynthetic electron transport chain; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type copper-transporter (InterPro:IPR001756), Heavy metal transport/detoxification protein (InterPro:IPR006121), ATPase, P type, cation/copper-transporter (InterPro:IPR006403), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), Heavy-metal-associated, conserved site (InterPro:IPR017969), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: P-type ATPase of Arabidopsis 2 (TAIR:AT5G21930.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative BnaC03g66560D, Description = BnaC03g66560D protein, PFAM = PF00403)' T '34.12' 'transport.metal' 'niben101scf08758_523-5198' '(gnl|cdd|36863 : 548.0) no description available & (at2g13620 : 456.0) member of Putative Na+/H+ antiporter family; cation/hydrogen exchanger 15 (CHX15); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 19 (TAIR:AT3G17630.1); Has 10260 Blast hits to 10223 proteins in 2141 species: Archae - 371; Bacteria - 8129; Metazoa - 51; Fungi - 171; Plants - 694; Viruses - 0; Other Eukaryotes - 844 (source: NCBI BLink). & (gnl|cdd|85173 : 147.0) no description available & (reliability: 912.0) & (original description: Putative MTR_5g074340, Description = Cation/H+ exchanger 2, PFAM = PF00999)' T '34.12' 'transport.metal' 'niben101scf08819_162729-167603' '(at5g41610 : 991.0) member of Putative Na+/H+ antiporter family; ARABIDOPSIS THALIANA CATION/H+ EXCHANGER 18 (ATCHX18); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 17 (TAIR:AT4G23700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36863 : 729.0) no description available & (gnl|cdd|85173 : 208.0) no description available & (reliability: 1982.0) & (original description: Putative Sb09g008200, Description = Putative uncharacterized protein Sb09g008200, PFAM = PF00999)' T '34.12' 'transport.metal' 'niben101scf08819_192264-198652' '(at5g41610 : 1007.0) member of Putative Na+/H+ antiporter family; ARABIDOPSIS THALIANA CATION/H+ EXCHANGER 18 (ATCHX18); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 17 (TAIR:AT4G23700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36863 : 719.0) no description available & (gnl|cdd|85173 : 212.0) no description available & (reliability: 2014.0) & (original description: Putative CHX18, Description = Cation/H(+) antiporter 18, PFAM = PF00999)' T '34.12' 'transport.metal' 'niben101scf08895_117061-122305' '(at2g23150 : 731.0) Encodes a member of the Nramp2 metal transporter family; like its homolog Atnramp4, localized in vacuolar membrane. Seedlings of double mutant, atnramp3-1 atnramp4-1, were arrested at early germination.; natural resistance-associated macrophage protein 3 (NRAMP3); FUNCTIONS IN: manganese ion transmembrane transporter activity, inorganic anion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: in 10 processes; LOCATED IN: vacuolar membrane, plasma membrane, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Natural resistance-associated macrophage protein (InterPro:IPR001046); BEST Arabidopsis thaliana protein match is: natural resistance associated macrophage protein 4 (TAIR:AT5G67330.1); Has 4997 Blast hits to 4957 proteins in 1529 species: Archae - 118; Bacteria - 3577; Metazoa - 372; Fungi - 260; Plants - 341; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (gnl|cdd|36505 : 549.0) no description available & (gnl|cdd|85534 : 431.0) no description available & (reliability: 1462.0) & (original description: Putative dmt1, Description = Natural resistance-associated macrophage protein 1, PFAM = PF01566)' T '34.12' 'transport.metal' 'niben101scf09141_165239-171027' '(at5g03570 : 547.0) Encodes FPN2, a tonoplast localized nickel transport protein. FPN2 is one of the Arabidopsis orthologs (AT2G38460/IREG1/FPN1 and AT5G03570/IREG2/FPN2) the iron efflux transporter ferroportin (FPN) identified in animals.; iron regulated 2 (IREG2); CONTAINS InterPro DOMAIN/s: Ferroporti-1 (InterPro:IPR009716), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: iron regulated 1 (TAIR:AT2G38460.1). & (gnl|cdd|37812 : 440.0) no description available & (reliability: 1094.0) & (original description: Putative IREG2, Description = Solute carrier family 40 member 2, PFAM = PF06963)' T '34.12' 'transport.metal' 'niben101scf09211_25946-28395' '(at5g20650 : 150.0) encodes a member of copper transporter family and functionally complements a high affinity copper transporter mutant in yeast; copper transporter 5 (COPT5); FUNCTIONS IN: copper ion transmembrane transporter activity, high affinity copper ion transmembrane transporter activity; INVOLVED IN: copper ion transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ctr copper transporter (InterPro:IPR007274); BEST Arabidopsis thaliana protein match is: Ctr copper transporter family (TAIR:AT2G26975.1); Has 497 Blast hits to 497 proteins in 140 species: Archae - 0; Bacteria - 0; Metazoa - 217; Fungi - 69; Plants - 156; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|38596 : 100.0) no description available & (gnl|cdd|67748 : 81.6) no description available & (reliability: 300.0) & (original description: Putative COPT5, Description = Copper transporter 5, PFAM = PF04145)' T '34.12' 'transport.metal' 'niben101scf09282_2820-7048' '(at5g03380 : 150.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G36950.1); Has 4435 Blast hits to 3252 proteins in 419 species: Archae - 9; Bacteria - 432; Metazoa - 923; Fungi - 249; Plants - 2333; Viruses - 0; Other Eukaryotes - 489 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative BnaAnng00630D, Description = BnaAnng00630D protein, PFAM = PF00403;PF00403)' T '34.12' 'transport.metal' 'niben101scf09455_135268-147340' '(at2g37330 : 383.0) Encodes an ABC transporter-like protein, without an ATPase domain, required for aluminum (Al) resistance/tolerance and may function to redistribute accumulated Al away from sensitive tissues in order to protect the growing root from the toxic effects of Al.; ALUMINUM SENSITIVE 3 (ALS3); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00245 (InterPro:IPR005226); Has 1906 Blast hits to 1906 proteins in 934 species: Archae - 39; Bacteria - 1722; Metazoa - 0; Fungi - 12; Plants - 43; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (gnl|cdd|30739 : 182.0) no description available & (reliability: 766.0) & (original description: Putative ALS3, Description = Protein ALUMINUM SENSITIVE 3, PFAM = PF03649)' T '34.12' 'transport.metal' 'niben101scf10022_144764-149258' '(at1g79400 : 590.0) member of Putative Na+/H+ antiporter family; cation/H+ exchanger 2 (CHX2); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: Cation/hydrogen exchanger family protein (TAIR:AT1G16380.1); Has 3598 Blast hits to 3570 proteins in 1038 species: Archae - 244; Bacteria - 2452; Metazoa - 34; Fungi - 130; Plants - 512; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (gnl|cdd|36863 : 466.0) no description available & (gnl|cdd|85173 : 133.0) no description available & (reliability: 1180.0) & (original description: Putative CHX2, Description = Cation/H(+) antiporter 2, PFAM = PF00999)' T '34.12' 'transport.metal' 'niben101scf10627_259822-285855' '(at5g21930 : 1049.0) P-Type ATPase, mediates copper transport to chloroplast thylakoid lumen. Required for accumulation of copper-containing plastocyanin in the thylakoid lumen and for effective photosynthetic electron transport; P-type ATPase of Arabidopsis 2 (PAA2); CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121), ATPase, P type, cation/copper-transporter (InterPro:IPR006403), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: P-type ATP-ase 1 (TAIR:AT4G33520.2). & (gnl|cdd|32399 : 592.0) no description available & (gnl|cdd|35428 : 554.0) no description available & (q03194|pma4_nicpl : 100.0) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 2098.0) & (original description: Putative PAA2, Description = Copper-transporting ATPase PAA2, chloroplastic, PFAM = PF00122;PF00702;PF00403)' T '34.12' 'transport.metal' 'niben101scf10628_134585-140876' '(gnl|cdd|36863 : 509.0) no description available & (at2g13620 : 474.0) member of Putative Na+/H+ antiporter family; cation/hydrogen exchanger 15 (CHX15); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 19 (TAIR:AT3G17630.1); Has 10260 Blast hits to 10223 proteins in 2141 species: Archae - 371; Bacteria - 8129; Metazoa - 51; Fungi - 171; Plants - 694; Viruses - 0; Other Eukaryotes - 844 (source: NCBI BLink). & (gnl|cdd|30823 : 113.0) no description available & (reliability: 948.0) & (original description: Putative RCOM_1447070, Description = Monovalent cation:proton antiporter, putative, PFAM = PF00999)' T '34.12' 'transport.metal' 'niben101scf11178_140112-158043' '(at2g23150 : 731.0) Encodes a member of the Nramp2 metal transporter family; like its homolog Atnramp4, localized in vacuolar membrane. Seedlings of double mutant, atnramp3-1 atnramp4-1, were arrested at early germination.; natural resistance-associated macrophage protein 3 (NRAMP3); FUNCTIONS IN: manganese ion transmembrane transporter activity, inorganic anion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: in 10 processes; LOCATED IN: vacuolar membrane, plasma membrane, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Natural resistance-associated macrophage protein (InterPro:IPR001046); BEST Arabidopsis thaliana protein match is: natural resistance associated macrophage protein 4 (TAIR:AT5G67330.1); Has 4997 Blast hits to 4957 proteins in 1529 species: Archae - 118; Bacteria - 3577; Metazoa - 372; Fungi - 260; Plants - 341; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (gnl|cdd|36505 : 555.0) no description available & (gnl|cdd|85534 : 431.0) no description available & (reliability: 1462.0) & (original description: Putative NRAMP3, Description = Metal transporter Nramp3, PFAM = PF01566)' T '34.12' 'transport.metal' 'niben101scf11254_55574-68693' '(at2g37330 : 377.0) Encodes an ABC transporter-like protein, without an ATPase domain, required for aluminum (Al) resistance/tolerance and may function to redistribute accumulated Al away from sensitive tissues in order to protect the growing root from the toxic effects of Al.; ALUMINUM SENSITIVE 3 (ALS3); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00245 (InterPro:IPR005226); Has 1906 Blast hits to 1906 proteins in 934 species: Archae - 39; Bacteria - 1722; Metazoa - 0; Fungi - 12; Plants - 43; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (gnl|cdd|30739 : 180.0) no description available & (reliability: 754.0) & (original description: Putative ALS3, Description = Protein ALUMINUM SENSITIVE 3, PFAM = PF03649)' T '34.12' 'transport.metal' 'niben101scf11261_286082-290164' '(at5g19090 : 100.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT3G06130.2); Has 50176 Blast hits to 18818 proteins in 1086 species: Archae - 85; Bacteria - 11227; Metazoa - 17638; Fungi - 3230; Plants - 9788; Viruses - 1123; Other Eukaryotes - 7085 (source: NCBI BLink). & (gnl|cdd|36816 : 87.7) no description available & (reliability: 184.8) & (original description: Putative At1g23000, Description = Chloroplast-targeted copper chaperone, putative, PFAM = PF00403)' T '34.12' 'transport.metal' 'niben101scf11337_31772-37694' '(gnl|cdd|36863 : 539.0) no description available & (at5g22900 : 442.0) member of Putative Na+/H+ antiporter family; cation/H+ exchanger 3 (CHX3); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, pollen tube; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 4 (TAIR:AT3G44900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30823 : 132.0) no description available & (reliability: 884.0) & (original description: Putative , Description = Putative cation/H(+) antiporter 3-like, PFAM = PF00582;PF00999)' T '34.12' 'transport.metal' 'niben101scf11785_3518-32900' '(at3g19490 : 703.0) member of Na+/H+ antiporter-Putative family; sodium:hydrogen antiporter 1 (NHD1); FUNCTIONS IN: potassium:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Na+/H+ antiporter NhaD-like (InterPro:IPR018390), Divalent ion symporter (InterPro:IPR004680); BEST Arabidopsis thaliana protein match is: Na+/H+ antiporter 2 (TAIR:AT1G49810.1); Has 2659 Blast hits to 2653 proteins in 794 species: Archae - 96; Bacteria - 1787; Metazoa - 39; Fungi - 48; Plants - 76; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (gnl|cdd|29730 : 238.0) no description available & (reliability: 1406.0) & (original description: Putative nhaD, Description = Na+/H+ antiporter, PFAM = PF03600)' T '34.12' 'transport.metal' 'niben101scf12017_81914-87676' '(at2g13620 : 675.0) member of Putative Na+/H+ antiporter family; cation/hydrogen exchanger 15 (CHX15); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 19 (TAIR:AT3G17630.1); Has 10260 Blast hits to 10223 proteins in 2141 species: Archae - 371; Bacteria - 8129; Metazoa - 51; Fungi - 171; Plants - 694; Viruses - 0; Other Eukaryotes - 844 (source: NCBI BLink). & (gnl|cdd|36863 : 545.0) no description available & (gnl|cdd|85173 : 166.0) no description available & (reliability: 1350.0) & (original description: Putative CHX15, Description = K(+)/H(+) antiporter 13, PFAM = PF00999)' T '34.12' 'transport.metal' 'niben101scf12102_128803-139336' '(at5g44790 : 1407.0) ATP dependent copper transporter vital for ethylene response pathway; RESPONSIVE-TO-ANTAGONIST 1 (RAN1); CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121), ATPase, P type, cation/copper-transporter (InterPro:IPR006403), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), Heavy-metal-associated, conserved site (InterPro:IPR017969), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), Copper ion-binding (InterPro:IPR006122), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: heavy metal atpase 5 (TAIR:AT1G63440.1); Has 47831 Blast hits to 34622 proteins in 3461 species: Archae - 1084; Bacteria - 31583; Metazoa - 5562; Fungi - 2713; Plants - 1975; Viruses - 3; Other Eukaryotes - 4911 (source: NCBI BLink). & (gnl|cdd|35428 : 964.0) no description available & (gnl|cdd|32399 : 683.0) no description available & (q6atv4|aca2_orysa : 108.0) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (reliability: 2814.0) & (original description: Putative HMA5, Description = Heavy metal ATPase transporter 5, PFAM = PF00403;PF00403;PF00122;PF00702)' T '34.12' 'transport.metal' 'niben101scf12280_140759-145287' '(at1g16310 : 538.0) Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G79520.1); Has 5067 Blast hits to 5063 proteins in 1838 species: Archae - 163; Bacteria - 4116; Metazoa - 44; Fungi - 281; Plants - 207; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink). & (gnl|cdd|36698 : 399.0) no description available & (gnl|cdd|85523 : 198.0) no description available & (reliability: 1076.0) & (original description: Putative MTP9, Description = Metal tolerance protein 9, PFAM = PF01545;PF16916)' T '34.12' 'transport.metal' 'niben101scf12469_152916-159107' '(at4g19690 : 363.0) Fe(II) transport protein (IRT1); iron-regulated transporter 1 (IRT1); FUNCTIONS IN: manganese ion transmembrane transporter activity, zinc ion transmembrane transporter activity, cadmium ion transmembrane transporter activity, copper uptake transmembrane transporter activity, iron ion transmembrane transporter activity; INVOLVED IN: in 11 processes; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: iron regulated transporter 2 (TAIR:AT4G19680.2); Has 2264 Blast hits to 2071 proteins in 344 species: Archae - 4; Bacteria - 222; Metazoa - 575; Fungi - 696; Plants - 525; Viruses - 0; Other Eukaryotes - 242 (source: NCBI BLink). & (gnl|cdd|36771 : 289.0) no description available & (gnl|cdd|86017 : 204.0) no description available & (reliability: 726.0) & (original description: Putative IRT1, Description = Fe(2+) transport protein 1, PFAM = PF02535)' T '34.12' 'transport.metal' 'niben101scf12469_171542-176775' '(at1g31260 : 426.0) member of Fe(II) transporter isolog family; zinc transporter 10 precursor (ZIP10); FUNCTIONS IN: cation transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cation transport; LOCATED IN: endomembrane system, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: iron-regulated transporter 1 (TAIR:AT4G19690.2); Has 1726 Blast hits to 1578 proteins in 260 species: Archae - 0; Bacteria - 87; Metazoa - 331; Fungi - 622; Plants - 500; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink). & (gnl|cdd|36771 : 304.0) no description available & (gnl|cdd|86017 : 220.0) no description available & (reliability: 852.0) & (original description: Putative ZIP10, Description = Probable zinc transporter 10, PFAM = PF02535)' T '34.12' 'transport.metal' 'niben101scf12469_171572-174661' '(at1g31260 : 186.0) member of Fe(II) transporter isolog family; zinc transporter 10 precursor (ZIP10); FUNCTIONS IN: cation transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cation transport; LOCATED IN: endomembrane system, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: iron-regulated transporter 1 (TAIR:AT4G19690.2); Has 1726 Blast hits to 1578 proteins in 260 species: Archae - 0; Bacteria - 87; Metazoa - 331; Fungi - 622; Plants - 500; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink). & (gnl|cdd|36771 : 141.0) no description available & (gnl|cdd|86017 : 91.5) no description available & (reliability: 372.0) & (original description: Putative irt2, Description = Zinc transporter protein, PFAM = PF02535)' T '34.12' 'transport.metal' 'niben101scf13196_44713-54785' '(at5g44790 : 1401.0) ATP dependent copper transporter vital for ethylene response pathway; RESPONSIVE-TO-ANTAGONIST 1 (RAN1); CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121), ATPase, P type, cation/copper-transporter (InterPro:IPR006403), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), Heavy-metal-associated, conserved site (InterPro:IPR017969), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), Copper ion-binding (InterPro:IPR006122), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: heavy metal atpase 5 (TAIR:AT1G63440.1); Has 47831 Blast hits to 34622 proteins in 3461 species: Archae - 1084; Bacteria - 31583; Metazoa - 5562; Fungi - 2713; Plants - 1975; Viruses - 3; Other Eukaryotes - 4911 (source: NCBI BLink). & (gnl|cdd|35428 : 951.0) no description available & (gnl|cdd|32399 : 676.0) no description available & (q6atv4|aca2_orysa : 127.0) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (reliability: 2802.0) & (original description: Putative RAN1, Description = Copper-transporting ATPase RAN1, PFAM = PF00403;PF00403;PF00702;PF00122)' T '34.12' 'transport.metal' 'niben101scf13429_302597-314481' '(at2g13620 : 1128.0) member of Putative Na+/H+ antiporter family; cation/hydrogen exchanger 15 (CHX15); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 19 (TAIR:AT3G17630.1); Has 10260 Blast hits to 10223 proteins in 2141 species: Archae - 371; Bacteria - 8129; Metazoa - 51; Fungi - 171; Plants - 694; Viruses - 0; Other Eukaryotes - 844 (source: NCBI BLink). & (gnl|cdd|36863 : 752.0) no description available & (gnl|cdd|85173 : 202.0) no description available & (reliability: 2256.0) & (original description: Putative CHX15, Description = Cation/H(+) antiporter 15, PFAM = PF00999)' T '34.12' 'transport.metal' 'niben101scf17561_124280-128858' '(at1g05300 : 350.0) member of Fe(II) transporter isolog family; zinc transporter 5 precursor (ZIP5); FUNCTIONS IN: cation transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: response to zinc ion, cation transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: zinc transporter 3 precursor (TAIR:AT2G32270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36771 : 302.0) no description available & (gnl|cdd|86017 : 203.0) no description available & (reliability: 700.0) & (original description: Putative zip3, Description = Zinc transporter protein, PFAM = PF02535)' T '34.12' 'transport.metal' 'niben101scf23355_39050-49356' '(at5g03280 : 1087.0) Involved in ethylene signal transduction. Acts downstream of CTR1. Positively regulates ORE1 and negatively regulates mir164A,B,C to regulate leaf senescence.; ETHYLENE INSENSITIVE 2 (EIN2); FUNCTIONS IN: transporter activity; INVOLVED IN: in 22 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Natural resistance-associated macrophage protein (InterPro:IPR001046), Ethylene-insensitive 2 (InterPro:IPR017187); BEST Arabidopsis thaliana protein match is: natural resistance-associated macrophage protein 1 (TAIR:AT1G80830.1); Has 4402 Blast hits to 4259 proteins in 1453 species: Archae - 50; Bacteria - 3021; Metazoa - 376; Fungi - 278; Plants - 375; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). & (gnl|cdd|36505 : 323.0) no description available & (gnl|cdd|80723 : 223.0) no description available & (reliability: 2174.0) & (original description: Putative EIN2, Description = Ethylene-insensitive protein 2, PFAM = PF01566)' T '34.12' 'transport.metal' 'niben101scf27243_33804-40301' '(at3g21580 : 386.0) cobalt ion transmembrane transporters; FUNCTIONS IN: cobalt ion transmembrane transporter activity; INVOLVED IN: cobalt ion transport, cobalamin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cobalt transport protein (InterPro:IPR003339); Has 2014 Blast hits to 2014 proteins in 922 species: Archae - 36; Bacteria - 1790; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 772.0) & (original description: Putative ABCI12, Description = Protein ABCI12, chloroplastic, PFAM = PF02361)' T '34.12' 'transport.metal' 'niben101scf37888_89772-100425' '(at5g26820 : 660.0) Mutations in MAR1 confer resistance, while MAR1 overexpression causes hypersensitivity to multiple aminoglycoside antibiotics. Localizes to the chloroplast envelope. MAR1 may act as a plastid transporter involved in cellular iron homeostasis.; iron-regulated protein 3 (IREG3); CONTAINS InterPro DOMAIN/s: Ferroporti-1 (InterPro:IPR009716), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: iron regulated 2 (TAIR:AT5G03570.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37812 : 102.0) no description available & (reliability: 1320.0) & (original description: Putative IREG3, Description = Solute carrier family 40 member 3, chloroplastic, PFAM = PF06963)' T '34.13' 'transport.peptides and oligopeptides' 'nbv0.3scaffold1386_60832-79591' '(at1g68570 : 645.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 1 (TAIR:AT3G54140.1); Has 5938 Blast hits to 5565 proteins in 1029 species: Archae - 0; Bacteria - 2262; Metazoa - 736; Fungi - 385; Plants - 2206; Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink). & (gnl|cdd|36451 : 555.0) no description available & (gnl|cdd|85071 : 270.0) no description available & (reliability: 1290.0) & (original description: Putative ptr1, Description = Peptide transporter, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'nbv0.3scaffold18248_31537-35718' '(at1g65730 : 767.0) Arabidopsis thaliana metal-nicotianamine transporter YSL4; YELLOW STRIPE like 7 (YSL7); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 5 (TAIR:AT3G17650.1); Has 1836 Blast hits to 1794 proteins in 556 species: Archae - 19; Bacteria - 893; Metazoa - 0; Fungi - 266; Plants - 510; Viruses - 1; Other Eukaryotes - 147 (source: NCBI BLink). & (gnl|cdd|66819 : 339.0) no description available & (reliability: 1534.0) & (original description: Putative YSL7, Description = Probable metal-nicotianamine transporter YSL7, PFAM = PF03169)' T '34.13' 'transport.peptides and oligopeptides' 'nbv0.3scaffold31890_20350-23928' '(at1g52190 : 486.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G16180.1); Has 5212 Blast hits to 5001 proteins in 870 species: Archae - 0; Bacteria - 1843; Metazoa - 575; Fungi - 389; Plants - 2143; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (gnl|cdd|36451 : 445.0) no description available & (gnl|cdd|85071 : 155.0) no description available & (reliability: 972.0) & (original description: Putative Sb03g035260, Description = Putative uncharacterized protein Sb03g035260, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'nbv0.3scaffold39026_24422-31281' '(gnl|cdd|37473 : 1035.0) no description available & (at4g10770 : 1011.0) oligopeptide transporter; oligopeptide transporter 7 (OPT7); CONTAINS InterPro DOMAIN/s: Tetrapeptide transporter, OPT1/isp4 (InterPro:IPR004648), Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: oligopeptide transporter 1 (TAIR:AT4G27730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66819 : 452.0) no description available & (reliability: 2022.0) & (original description: Putative OPT7, Description = Oligopeptide transporter 7, PFAM = PF03169)' T '34.13' 'transport.peptides and oligopeptides' 'nbv0.3scaffold44098_4380-11651' '(at1g59740 : 405.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G33440.1); Has 6789 Blast hits to 6649 proteins in 1324 species: Archae - 0; Bacteria - 3372; Metazoa - 487; Fungi - 362; Plants - 2181; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink). & (gnl|cdd|36451 : 277.0) no description available & (gnl|cdd|85071 : 91.1) no description available & (reliability: 810.0) & (original description: Putative AIT1, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'nbv0.3scaffold65525_5616-10412' '(at2g38100 : 317.0) proton-dependent oligopeptide transport (POT) family protein; FUNCTIONS IN: amino acid transmembrane transporter activity, uracil transmembrane transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109); BEST Arabidopsis thaliana protein match is: peptide transporter 5 (TAIR:AT5G01180.1); Has 2766 Blast hits to 2715 proteins in 326 species: Archae - 0; Bacteria - 547; Metazoa - 329; Fungi - 2; Plants - 1871; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|36451 : 227.0) no description available & (reliability: 634.0) & (original description: Putative , Description = , PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'nbv0.3scaffold66229_549-10230' '(at5g62050 : 306.0) essential factor for protein sorting and assembly into membranes; homolog of yeast oxidase assembly 1 (OXA1) (OXA1); FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein import into mitochondrial inner membrane, protein complex assembly; LOCATED IN: mitochondrion, mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Membrane insertion protein, OxaA/YidC, core (InterPro:IPR020001); BEST Arabidopsis thaliana protein match is: inner membrane protein OXA1-like (TAIR:AT2G46470.1); Has 6982 Blast hits to 6979 proteins in 2374 species: Archae - 0; Bacteria - 4991; Metazoa - 235; Fungi - 246; Plants - 190; Viruses - 0; Other Eukaryotes - 1320 (source: NCBI BLink). & (gnl|cdd|36453 : 173.0) no description available & (gnl|cdd|31050 : 101.0) no description available & (reliability: 612.0) & (original description: Putative OXA1, Description = Mitochondrial inner membrane protein OXA1, PFAM = PF02096)' T '34.13' 'transport.peptides and oligopeptides' 'nbv0.3scaffold67326_107-6396' '(at1g52190 : 637.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G16180.1); Has 5212 Blast hits to 5001 proteins in 870 species: Archae - 0; Bacteria - 1843; Metazoa - 575; Fungi - 389; Plants - 2143; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (gnl|cdd|36451 : 490.0) no description available & (gnl|cdd|85071 : 174.0) no description available & (reliability: 1274.0) & (original description: Putative NPF1.2, Description = Protein NRT1/ PTR FAMILY 1.2, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'nbv0.3scaffold78346_1884-7245' '(at1g52190 : 610.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G16180.1); Has 5212 Blast hits to 5001 proteins in 870 species: Archae - 0; Bacteria - 1843; Metazoa - 575; Fungi - 389; Plants - 2143; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (gnl|cdd|36451 : 449.0) no description available & (gnl|cdd|85071 : 179.0) no description available & (reliability: 1220.0) & (original description: Putative BnaCnng68850D, Description = BnaCnng68850D protein, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'nbv0.5scaffold73_1162935-1233556' '(at1g69850 : 248.0) Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots.; nitrate transporter 1:2 (NRT1:2); FUNCTIONS IN: transporter activity, calcium ion binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G27040.1); Has 5870 Blast hits to 5639 proteins in 1033 species: Archae - 0; Bacteria - 2327; Metazoa - 503; Fungi - 400; Plants - 2186; Viruses - 0; Other Eukaryotes - 454 (source: NCBI BLink). & (gnl|cdd|36451 : 196.0) no description available & (gnl|cdd|85071 : 124.0) no description available & (reliability: 454.0) & (original description: Putative AIT1, Description = Nitrate transporter 1.2, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'nbv0.5scaffold306_426979-429568' '(at1g65730 : 193.0) Arabidopsis thaliana metal-nicotianamine transporter YSL4; YELLOW STRIPE like 7 (YSL7); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 5 (TAIR:AT3G17650.1); Has 1836 Blast hits to 1794 proteins in 556 species: Archae - 19; Bacteria - 893; Metazoa - 0; Fungi - 266; Plants - 510; Viruses - 1; Other Eukaryotes - 147 (source: NCBI BLink). & (gnl|cdd|66819 : 106.0) no description available & (reliability: 386.0) & (original description: Putative A17, Description = Putative metal-nicotianamine transporter YSL6, PFAM = PF03169)' T '34.13' 'transport.peptides and oligopeptides' 'nbv0.5scaffold312_731678-744369' '(at5g62050 : 350.0) essential factor for protein sorting and assembly into membranes; homolog of yeast oxidase assembly 1 (OXA1) (OXA1); FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein import into mitochondrial inner membrane, protein complex assembly; LOCATED IN: mitochondrion, mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Membrane insertion protein, OxaA/YidC, core (InterPro:IPR020001); BEST Arabidopsis thaliana protein match is: inner membrane protein OXA1-like (TAIR:AT2G46470.1); Has 6982 Blast hits to 6979 proteins in 2374 species: Archae - 0; Bacteria - 4991; Metazoa - 235; Fungi - 246; Plants - 190; Viruses - 0; Other Eukaryotes - 1320 (source: NCBI BLink). & (gnl|cdd|36453 : 202.0) no description available & (gnl|cdd|31050 : 123.0) no description available & (reliability: 700.0) & (original description: Putative OXA1, Description = Mitochondrial inner membrane protein OXA1, PFAM = PF02096)' T '34.13' 'transport.peptides and oligopeptides' 'nbv0.5scaffold1694_93316-101590' '(at1g59740 : 413.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G33440.1); Has 6789 Blast hits to 6649 proteins in 1324 species: Archae - 0; Bacteria - 3372; Metazoa - 487; Fungi - 362; Plants - 2181; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink). & (gnl|cdd|36451 : 285.0) no description available & (gnl|cdd|85071 : 93.8) no description available & (reliability: 826.0) & (original description: Putative BnaA09g14450D, Description = BnaA09g14450D protein, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'nbv0.5scaffold7871_35782-56577' '(at3g16180 : 537.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G52190.1); Has 5584 Blast hits to 5329 proteins in 963 species: Archae - 0; Bacteria - 2098; Metazoa - 610; Fungi - 414; Plants - 2170; Viruses - 0; Other Eukaryotes - 292 (source: NCBI BLink). & (gnl|cdd|36451 : 459.0) no description available & (gnl|cdd|85071 : 182.0) no description available & (reliability: 1074.0) & (original description: Putative Zm.38896, Description = Peptide transporter PTR2, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben044scf00000418ctg002_2300-7317' '(at1g65730 : 766.0) Arabidopsis thaliana metal-nicotianamine transporter YSL4; YELLOW STRIPE like 7 (YSL7); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 5 (TAIR:AT3G17650.1); Has 1836 Blast hits to 1794 proteins in 556 species: Archae - 19; Bacteria - 893; Metazoa - 0; Fungi - 266; Plants - 510; Viruses - 1; Other Eukaryotes - 147 (source: NCBI BLink). & (gnl|cdd|66819 : 337.0) no description available & (reliability: 1532.0) & (original description: Putative A17, Description = Oligopeptide transporter, putative, PFAM = PF03169)' T '34.13' 'transport.peptides and oligopeptides' 'niben044scf00000517ctg009_1-5207' '(gnl|cdd|36451 : 554.0) no description available & (at5g01180 : 516.0) Encodes a dipeptide transporter expressed in pollen and ovules during early seed development. GFP-tagged PTR5 localizes to the plasma membrane.; peptide transporter 5 (PTR5); CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 1 (TAIR:AT3G54140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85071 : 255.0) no description available & (reliability: 1032.0) & (original description: Putative ptr1, Description = Peptide transporter, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben044scf00002841ctg004_1258-5303' '(at3g54140 : 652.0) Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. GFP-tagged PTR1 localizes to the plasma membrane and has 8 to 11 predicted transmembrane domains. PTR1 is expressed in a number of different vascular tissues throughout the plant based on promoter:GUS expression analysis. ptr1 mutants have a lower dry weight than wild type plants when both are grown with Pro-Ala or Ala-Ala dipeptides as their nitrogen source, suggesting that PTR1 plays a role in dipeptide uptake in the roots. Furthermore N content of ptr1 mutants is lower than that of wild type plants when grown with Pro-Ala or a mixture of dipeptides as nitrogen source; peptide transporter 1 (PTR1); FUNCTIONS IN: dipeptide transporter activity, tripeptide transporter activity, transporter activity; INVOLVED IN: dipeptide transport, oligopeptide transport, nitrogen compound metabolic process, tripeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 40 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 5 (TAIR:AT5G01180.1); Has 8339 Blast hits to 7886 proteins in 1502 species: Archae - 0; Bacteria - 4164; Metazoa - 798; Fungi - 498; Plants - 2234; Viruses - 0; Other Eukaryotes - 645 (source: NCBI BLink). & (gnl|cdd|36451 : 494.0) no description available & (gnl|cdd|85071 : 280.0) no description available & (reliability: 1304.0) & (original description: Putative ptr1, Description = Peptide transporter, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben044scf00002841ctg005_1468-5591' '(at3g54140 : 830.0) Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. GFP-tagged PTR1 localizes to the plasma membrane and has 8 to 11 predicted transmembrane domains. PTR1 is expressed in a number of different vascular tissues throughout the plant based on promoter:GUS expression analysis. ptr1 mutants have a lower dry weight than wild type plants when both are grown with Pro-Ala or Ala-Ala dipeptides as their nitrogen source, suggesting that PTR1 plays a role in dipeptide uptake in the roots. Furthermore N content of ptr1 mutants is lower than that of wild type plants when grown with Pro-Ala or a mixture of dipeptides as nitrogen source; peptide transporter 1 (PTR1); FUNCTIONS IN: dipeptide transporter activity, tripeptide transporter activity, transporter activity; INVOLVED IN: dipeptide transport, oligopeptide transport, nitrogen compound metabolic process, tripeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 40 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 5 (TAIR:AT5G01180.1); Has 8339 Blast hits to 7886 proteins in 1502 species: Archae - 0; Bacteria - 4164; Metazoa - 798; Fungi - 498; Plants - 2234; Viruses - 0; Other Eukaryotes - 645 (source: NCBI BLink). & (gnl|cdd|36451 : 626.0) no description available & (gnl|cdd|85071 : 292.0) no description available & (reliability: 1660.0) & (original description: Putative ptr1, Description = Peptide transporter, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben044scf00004035ctg001_49805-54752' '(at3g47960 : 627.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G62680.1); Has 3941 Blast hits to 3750 proteins in 534 species: Archae - 0; Bacteria - 697; Metazoa - 584; Fungi - 378; Plants - 2186; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (gnl|cdd|36451 : 522.0) no description available & (gnl|cdd|85071 : 166.0) no description available & (reliability: 1254.0) & (original description: Putative GTR1, Description = Nitrate transporter, putative, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben044scf00009960ctg019_1-2453' '(at5g64410 : 439.0) oligopeptide transporter; oligopeptide transporter 4 (OPT4); CONTAINS InterPro DOMAIN/s: Tetrapeptide transporter, OPT1/isp4 (InterPro:IPR004648), Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: oligopeptide transporter 2 (TAIR:AT1G09930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37473 : 403.0) no description available & (gnl|cdd|66819 : 192.0) no description available & (reliability: 878.0) & (original description: Putative OPT2, Description = Oligopeptide transporter 4, PFAM = PF03169)' T '34.13' 'transport.peptides and oligopeptides' 'niben044scf00011404ctg005_1-5918' '(at1g32450 : 838.0) Transmembrane nitrate transporter. Involved in xylem transport of nitrate from root to shoot. Induced in response to nitrate. Not involved in nitrate uptake. expressed in root pericycle cells.; nitrate transporter 1.5 (NRT1.5); CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: NITRATE TRANSPORTER 1.8 (TAIR:AT4G21680.1); Has 7755 Blast hits to 7381 proteins in 1434 species: Archae - 0; Bacteria - 3851; Metazoa - 707; Fungi - 433; Plants - 2214; Viruses - 0; Other Eukaryotes - 550 (source: NCBI BLink). & (gnl|cdd|36451 : 556.0) no description available & (gnl|cdd|85071 : 223.0) no description available & (reliability: 1676.0) & (original description: Putative ptr1, Description = Nitrate transporter 1.5, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben044scf00013014ctg022_4898-9901' '(at1g22540 : 598.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G72140.1); Has 7676 Blast hits to 7510 proteins in 1439 species: Archae - 0; Bacteria - 3907; Metazoa - 586; Fungi - 484; Plants - 2183; Viruses - 0; Other Eukaryotes - 516 (source: NCBI BLink). & (gnl|cdd|36451 : 520.0) no description available & (gnl|cdd|85071 : 208.0) no description available & (reliability: 1196.0) & (original description: Putative PTR4, Description = Proton-dependent oligopeptide transport family protein, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben044scf00013774ctg005_296-2844' '(at2g40460 : 188.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 3 (TAIR:AT5G46050.1); Has 7555 Blast hits to 7238 proteins in 1401 species: Archae - 0; Bacteria - 3710; Metazoa - 634; Fungi - 431; Plants - 2228; Viruses - 0; Other Eukaryotes - 552 (source: NCBI BLink). & (gnl|cdd|36451 : 116.0) no description available & (reliability: 376.0) & (original description: Putative ppt1, Description = Peptide transporter, PFAM = )' T '34.13' 'transport.peptides and oligopeptides' 'niben044scf00015668ctg012_126-7086' '(at1g65730 : 953.0) Arabidopsis thaliana metal-nicotianamine transporter YSL4; YELLOW STRIPE like 7 (YSL7); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 5 (TAIR:AT3G17650.1); Has 1836 Blast hits to 1794 proteins in 556 species: Archae - 19; Bacteria - 893; Metazoa - 0; Fungi - 266; Plants - 510; Viruses - 1; Other Eukaryotes - 147 (source: NCBI BLink). & (gnl|cdd|66819 : 396.0) no description available & (reliability: 1906.0) & (original description: Putative YSL7, Description = Probable metal-nicotianamine transporter YSL7, PFAM = PF03169)' T '34.13' 'transport.peptides and oligopeptides' 'niben044scf00018281ctg006_1540-8803' '(at1g68570 : 845.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 1 (TAIR:AT3G54140.1); Has 5938 Blast hits to 5565 proteins in 1029 species: Archae - 0; Bacteria - 2262; Metazoa - 736; Fungi - 385; Plants - 2206; Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink). & (gnl|cdd|36451 : 583.0) no description available & (gnl|cdd|85071 : 260.0) no description available & (reliability: 1690.0) & (original description: Putative ptr1, Description = Peptide transporter, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben044scf00033128ctg001_11954-16058' '(at1g65730 : 600.0) Arabidopsis thaliana metal-nicotianamine transporter YSL4; YELLOW STRIPE like 7 (YSL7); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 5 (TAIR:AT3G17650.1); Has 1836 Blast hits to 1794 proteins in 556 species: Archae - 19; Bacteria - 893; Metazoa - 0; Fungi - 266; Plants - 510; Viruses - 1; Other Eukaryotes - 147 (source: NCBI BLink). & (gnl|cdd|66819 : 239.0) no description available & (reliability: 1200.0) & (original description: Putative YSL3, Description = Putative metal-nicotianamine transporter YSL7, PFAM = PF03169)' T '34.13' 'transport.peptides and oligopeptides' 'niben044scf00035392ctg002_6099-9675' '(at3g16180 : 267.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G52190.1); Has 5584 Blast hits to 5329 proteins in 963 species: Archae - 0; Bacteria - 2098; Metazoa - 610; Fungi - 414; Plants - 2170; Viruses - 0; Other Eukaryotes - 292 (source: NCBI BLink). & (gnl|cdd|36451 : 223.0) no description available & (gnl|cdd|85071 : 95.3) no description available & (reliability: 534.0) & (original description: Putative BnaA01g28150D, Description = BnaA01g28150D protein, PFAM = PF00854;PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben044scf00040468ctg000_2701-10029' '(at1g32450 : 851.0) Transmembrane nitrate transporter. Involved in xylem transport of nitrate from root to shoot. Induced in response to nitrate. Not involved in nitrate uptake. expressed in root pericycle cells.; nitrate transporter 1.5 (NRT1.5); CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: NITRATE TRANSPORTER 1.8 (TAIR:AT4G21680.1); Has 7755 Blast hits to 7381 proteins in 1434 species: Archae - 0; Bacteria - 3851; Metazoa - 707; Fungi - 433; Plants - 2214; Viruses - 0; Other Eukaryotes - 550 (source: NCBI BLink). & (gnl|cdd|36451 : 551.0) no description available & (gnl|cdd|85071 : 230.0) no description available & (reliability: 1702.0) & (original description: Putative NTR1, Description = Nitrate transporter 1.5, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben044scf00042518ctg000_1367-10086' '(at1g59740 : 823.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G33440.1); Has 6789 Blast hits to 6649 proteins in 1324 species: Archae - 0; Bacteria - 3372; Metazoa - 487; Fungi - 362; Plants - 2181; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink). & (gnl|cdd|36451 : 532.0) no description available & (gnl|cdd|85071 : 193.0) no description available & (reliability: 1646.0) & (original description: Putative AIT2, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben044scf00045892ctg000_5152-10074' '(at2g38100 : 316.0) proton-dependent oligopeptide transport (POT) family protein; FUNCTIONS IN: amino acid transmembrane transporter activity, uracil transmembrane transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109); BEST Arabidopsis thaliana protein match is: peptide transporter 5 (TAIR:AT5G01180.1); Has 2766 Blast hits to 2715 proteins in 326 species: Archae - 0; Bacteria - 547; Metazoa - 329; Fungi - 2; Plants - 1871; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|36451 : 225.0) no description available & (reliability: 632.0) & (original description: Putative NPF5.5, Description = Protein NRT1/ PTR FAMILY 5.5, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben044scf00053197ctg002_12791-19141' '(gnl|cdd|36451 : 461.0) no description available & (at1g27040 : 399.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1:2 (TAIR:AT1G69850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85071 : 195.0) no description available & (reliability: 790.0) & (original description: Putative AIT1, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben044scf00053197ctg002_12803-19223' '(gnl|cdd|36451 : 459.0) no description available & (at1g69850 : 398.0) Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots.; nitrate transporter 1:2 (NRT1:2); FUNCTIONS IN: transporter activity, calcium ion binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G27040.1); Has 5870 Blast hits to 5639 proteins in 1033 species: Archae - 0; Bacteria - 2327; Metazoa - 503; Fungi - 400; Plants - 2186; Viruses - 0; Other Eukaryotes - 454 (source: NCBI BLink). & (gnl|cdd|85071 : 194.0) no description available & (reliability: 788.0) & (original description: Putative AIT1, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben044scf00054745ctg000_5216-12253' '(at4g16370 : 1186.0) Encodes an oligopeptide transporter involved in metal homeostasis.; oligopeptide transporter (OPT3); CONTAINS InterPro DOMAIN/s: Tetrapeptide transporter, OPT1/isp4 (InterPro:IPR004648), Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: oligopeptide transporter 2 (TAIR:AT1G09930.1); Has 1146 Blast hits to 1125 proteins in 109 species: Archae - 0; Bacteria - 26; Metazoa - 0; Fungi - 775; Plants - 337; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|37473 : 1006.0) no description available & (gnl|cdd|66819 : 456.0) no description available & (reliability: 2372.0) & (original description: Putative OPT3, Description = Oligopeptide transporter 3, PFAM = PF03169)' T '34.13' 'transport.peptides and oligopeptides' 'niben044scf00061668ctg000_1-5066' '(at1g52190 : 609.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G16180.1); Has 5212 Blast hits to 5001 proteins in 870 species: Archae - 0; Bacteria - 1843; Metazoa - 575; Fungi - 389; Plants - 2143; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (gnl|cdd|36451 : 445.0) no description available & (gnl|cdd|85071 : 175.0) no description available & (reliability: 1218.0) & (original description: Putative NPF1.2, Description = Protein NRT1/ PTR FAMILY 1.2, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf00348_578216-587477' '(at3g54140 : 804.0) Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. GFP-tagged PTR1 localizes to the plasma membrane and has 8 to 11 predicted transmembrane domains. PTR1 is expressed in a number of different vascular tissues throughout the plant based on promoter:GUS expression analysis. ptr1 mutants have a lower dry weight than wild type plants when both are grown with Pro-Ala or Ala-Ala dipeptides as their nitrogen source, suggesting that PTR1 plays a role in dipeptide uptake in the roots. Furthermore N content of ptr1 mutants is lower than that of wild type plants when grown with Pro-Ala or a mixture of dipeptides as nitrogen source; peptide transporter 1 (PTR1); FUNCTIONS IN: dipeptide transporter activity, tripeptide transporter activity, transporter activity; INVOLVED IN: dipeptide transport, oligopeptide transport, nitrogen compound metabolic process, tripeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 40 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 5 (TAIR:AT5G01180.1); Has 8339 Blast hits to 7886 proteins in 1502 species: Archae - 0; Bacteria - 4164; Metazoa - 798; Fungi - 498; Plants - 2234; Viruses - 0; Other Eukaryotes - 645 (source: NCBI BLink). & (gnl|cdd|36451 : 612.0) no description available & (gnl|cdd|85071 : 303.0) no description available & (reliability: 1608.0) & (original description: Putative ptr1, Description = Peptide transporter, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf00497_197280-205017' '(at1g32450 : 778.0) Transmembrane nitrate transporter. Involved in xylem transport of nitrate from root to shoot. Induced in response to nitrate. Not involved in nitrate uptake. expressed in root pericycle cells.; nitrate transporter 1.5 (NRT1.5); CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: NITRATE TRANSPORTER 1.8 (TAIR:AT4G21680.1); Has 7755 Blast hits to 7381 proteins in 1434 species: Archae - 0; Bacteria - 3851; Metazoa - 707; Fungi - 433; Plants - 2214; Viruses - 0; Other Eukaryotes - 550 (source: NCBI BLink). & (gnl|cdd|36451 : 518.0) no description available & (gnl|cdd|85071 : 203.0) no description available & (reliability: 1556.0) & (original description: Putative ptr1, Description = Nitrate transporter 1.5, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf00526_187896-195978' '(at1g32450 : 833.0) Transmembrane nitrate transporter. Involved in xylem transport of nitrate from root to shoot. Induced in response to nitrate. Not involved in nitrate uptake. expressed in root pericycle cells.; nitrate transporter 1.5 (NRT1.5); CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: NITRATE TRANSPORTER 1.8 (TAIR:AT4G21680.1); Has 7755 Blast hits to 7381 proteins in 1434 species: Archae - 0; Bacteria - 3851; Metazoa - 707; Fungi - 433; Plants - 2214; Viruses - 0; Other Eukaryotes - 550 (source: NCBI BLink). & (gnl|cdd|36451 : 526.0) no description available & (gnl|cdd|85071 : 202.0) no description available & (reliability: 1666.0) & (original description: Putative ptr1, Description = Nitrate transporter 1.5, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf00552_155333-161007' '(gnl|cdd|37473 : 958.0) no description available & (at1g09930 : 943.0) oligopeptide transporter; oligopeptide transporter 2 (OPT2); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: sperm cell, flower, pollen tube; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Tetrapeptide transporter, OPT1/isp4 (InterPro:IPR004648), Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: oligopeptide transporter 4 (TAIR:AT5G64410.1); Has 1309 Blast hits to 1283 proteins in 148 species: Archae - 0; Bacteria - 69; Metazoa - 0; Fungi - 834; Plants - 392; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|66819 : 444.0) no description available & (reliability: 1886.0) & (original description: Putative OPT2, Description = Oligopeptide transporter 2, PFAM = PF03169)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf00577_846018-853380' '(at1g68570 : 839.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 1 (TAIR:AT3G54140.1); Has 5938 Blast hits to 5565 proteins in 1029 species: Archae - 0; Bacteria - 2262; Metazoa - 736; Fungi - 385; Plants - 2206; Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink). & (gnl|cdd|36451 : 575.0) no description available & (gnl|cdd|85071 : 259.0) no description available & (reliability: 1678.0) & (original description: Putative ptr1, Description = Peptide transporter, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf00786_97344-106573' '(at3g27020 : 1075.0) Arabidopsis thaliana metal-nicotianamine transporter YSL6; YELLOW STRIPE like 6 (YSL6); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 4 (TAIR:AT5G41000.1); Has 1640 Blast hits to 1588 proteins in 511 species: Archae - 21; Bacteria - 808; Metazoa - 0; Fungi - 241; Plants - 449; Viruses - 1; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|66819 : 328.0) no description available & (reliability: 2150.0) & (original description: Putative YSL6, Description = Probable metal-nicotianamine transporter YSL6, PFAM = PF03169)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf00847_53954-61422' '(gnl|cdd|37473 : 988.0) no description available & (at5g64410 : 948.0) oligopeptide transporter; oligopeptide transporter 4 (OPT4); CONTAINS InterPro DOMAIN/s: Tetrapeptide transporter, OPT1/isp4 (InterPro:IPR004648), Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: oligopeptide transporter 2 (TAIR:AT1G09930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66819 : 459.0) no description available & (reliability: 1896.0) & (original description: Putative OPT2, Description = Oligopeptide transporter 2, PFAM = PF03169)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf01392_127707-133878' '(gnl|cdd|37473 : 1029.0) no description available & (at4g27730 : 961.0) oligopeptide transporter; oligopeptide transporter 1 (OPT6); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Tetrapeptide transporter, OPT1/isp4 (InterPro:IPR004648), Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: oligopeptide transporter 9 (TAIR:AT5G53510.1); Has 1157 Blast hits to 1133 proteins in 115 species: Archae - 0; Bacteria - 21; Metazoa - 0; Fungi - 800; Plants - 327; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|66819 : 435.0) no description available & (reliability: 1922.0) & (original description: Putative OPT6, Description = Oligopeptide transporter 6, PFAM = PF03169)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf01396_244065-248217' '(at3g16180 : 421.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G52190.1); Has 5584 Blast hits to 5329 proteins in 963 species: Archae - 0; Bacteria - 2098; Metazoa - 610; Fungi - 414; Plants - 2170; Viruses - 0; Other Eukaryotes - 292 (source: NCBI BLink). & (gnl|cdd|36451 : 372.0) no description available & (gnl|cdd|85071 : 154.0) no description available & (reliability: 842.0) & (original description: Putative BnaCnng68850D, Description = BnaCnng68850D protein, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf01487_406064-431259' '(gnl|cdd|36451 : 499.0) no description available & (at1g27040 : 414.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1:2 (TAIR:AT1G69850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85071 : 195.0) no description available & (reliability: 802.0) & (original description: Putative AIT2, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf01537_119772-122535' '(at1g69850 : 141.0) Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots.; nitrate transporter 1:2 (NRT1:2); FUNCTIONS IN: transporter activity, calcium ion binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G27040.1); Has 5870 Blast hits to 5639 proteins in 1033 species: Archae - 0; Bacteria - 2327; Metazoa - 503; Fungi - 400; Plants - 2186; Viruses - 0; Other Eukaryotes - 454 (source: NCBI BLink). & (gnl|cdd|36451 : 92.7) no description available & (reliability: 272.0) & (original description: Putative AIT1, Description = Nitrate transporter 1.2, PFAM = )' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf01775_32026-38835' '(gnl|cdd|36451 : 465.0) no description available & (at1g69850 : 385.0) Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots.; nitrate transporter 1:2 (NRT1:2); FUNCTIONS IN: transporter activity, calcium ion binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G27040.1); Has 5870 Blast hits to 5639 proteins in 1033 species: Archae - 0; Bacteria - 2327; Metazoa - 503; Fungi - 400; Plants - 2186; Viruses - 0; Other Eukaryotes - 454 (source: NCBI BLink). & (gnl|cdd|85071 : 193.0) no description available & (reliability: 770.0) & (original description: Putative AIT2, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf02085_325754-332832' '(at2g37900 : 754.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G53960.1); Has 7031 Blast hits to 6882 proteins in 1319 species: Archae - 0; Bacteria - 3384; Metazoa - 508; Fungi - 445; Plants - 2220; Viruses - 0; Other Eukaryotes - 474 (source: NCBI BLink). & (gnl|cdd|36451 : 576.0) no description available & (gnl|cdd|85071 : 214.0) no description available & (reliability: 1508.0) & (original description: Putative ptr2, Description = Proton-dependent oligopeptide transport family protein, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf02085_455550-462960' '(at3g53960 : 725.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G37900.1); Has 6025 Blast hits to 5886 proteins in 1158 species: Archae - 0; Bacteria - 2442; Metazoa - 501; Fungi - 426; Plants - 2213; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink). & (gnl|cdd|36451 : 567.0) no description available & (gnl|cdd|85071 : 210.0) no description available & (reliability: 1450.0) & (original description: Putative ptr2, Description = Peptide transporter, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf02239_147650-158930' '(at1g22540 : 644.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G72140.1); Has 7676 Blast hits to 7510 proteins in 1439 species: Archae - 0; Bacteria - 3907; Metazoa - 586; Fungi - 484; Plants - 2183; Viruses - 0; Other Eukaryotes - 516 (source: NCBI BLink). & (gnl|cdd|36451 : 542.0) no description available & (gnl|cdd|85071 : 230.0) no description available & (reliability: 1288.0) & (original description: Putative PTR1, Description = Proton-dependent oligopeptide transport family protein, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf02414_239739-245750' '(at2g40460 : 855.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 3 (TAIR:AT5G46050.1); Has 7555 Blast hits to 7238 proteins in 1401 species: Archae - 0; Bacteria - 3710; Metazoa - 634; Fungi - 431; Plants - 2228; Viruses - 0; Other Eukaryotes - 552 (source: NCBI BLink). & (gnl|cdd|36451 : 525.0) no description available & (gnl|cdd|85071 : 284.0) no description available & (reliability: 1710.0) & (original description: Putative ptr1, Description = Peptide transporter PTR3-A, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf02486_440037-445671' '(gnl|cdd|36451 : 446.0) no description available & (at1g59740 : 404.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G33440.1); Has 6789 Blast hits to 6649 proteins in 1324 species: Archae - 0; Bacteria - 3372; Metazoa - 487; Fungi - 362; Plants - 2181; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink). & (gnl|cdd|85071 : 168.0) no description available & (reliability: 808.0) & (original description: Putative AIT1, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf02486_440129-445713' '(gnl|cdd|36451 : 449.0) no description available & (at1g59740 : 405.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G33440.1); Has 6789 Blast hits to 6649 proteins in 1324 species: Archae - 0; Bacteria - 3372; Metazoa - 487; Fungi - 362; Plants - 2181; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink). & (gnl|cdd|85071 : 170.0) no description available & (reliability: 810.0) & (original description: Putative Sb03g034595, Description = Putative uncharacterized protein Sb03g034595, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf02572_10534-15361' '(at1g52190 : 295.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G16180.1); Has 5212 Blast hits to 5001 proteins in 870 species: Archae - 0; Bacteria - 1843; Metazoa - 575; Fungi - 389; Plants - 2143; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (gnl|cdd|36451 : 235.0) no description available & (gnl|cdd|85071 : 81.5) no description available & (reliability: 590.0) & (original description: Putative At1g52190, Description = Peptide/nitrate transporter plant, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf02572_39141-44552' '(at1g52190 : 650.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G16180.1); Has 5212 Blast hits to 5001 proteins in 870 species: Archae - 0; Bacteria - 1843; Metazoa - 575; Fungi - 389; Plants - 2143; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (gnl|cdd|36451 : 483.0) no description available & (gnl|cdd|85071 : 183.0) no description available & (reliability: 1300.0) & (original description: Putative PGSC0003DMG403002548, Description = Peptide/nitrate transporter plant, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf02572_39195-44453' '(at1g52190 : 610.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G16180.1); Has 5212 Blast hits to 5001 proteins in 870 species: Archae - 0; Bacteria - 1843; Metazoa - 575; Fungi - 389; Plants - 2143; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (gnl|cdd|36451 : 445.0) no description available & (gnl|cdd|85071 : 174.0) no description available & (reliability: 1220.0) & (original description: Putative NPF1.2, Description = Protein NRT1/ PTR FAMILY 1.2, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf03202_277127-281190' '(at3g54140 : 788.0) Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. GFP-tagged PTR1 localizes to the plasma membrane and has 8 to 11 predicted transmembrane domains. PTR1 is expressed in a number of different vascular tissues throughout the plant based on promoter:GUS expression analysis. ptr1 mutants have a lower dry weight than wild type plants when both are grown with Pro-Ala or Ala-Ala dipeptides as their nitrogen source, suggesting that PTR1 plays a role in dipeptide uptake in the roots. Furthermore N content of ptr1 mutants is lower than that of wild type plants when grown with Pro-Ala or a mixture of dipeptides as nitrogen source; peptide transporter 1 (PTR1); FUNCTIONS IN: dipeptide transporter activity, tripeptide transporter activity, transporter activity; INVOLVED IN: dipeptide transport, oligopeptide transport, nitrogen compound metabolic process, tripeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 40 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 5 (TAIR:AT5G01180.1); Has 8339 Blast hits to 7886 proteins in 1502 species: Archae - 0; Bacteria - 4164; Metazoa - 798; Fungi - 498; Plants - 2234; Viruses - 0; Other Eukaryotes - 645 (source: NCBI BLink). & (gnl|cdd|36451 : 616.0) no description available & (gnl|cdd|85071 : 292.0) no description available & (reliability: 1576.0) & (original description: Putative ptr1, Description = Peptide transporter, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf03257_440838-446802' '(at1g33440 : 687.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G59740.1); Has 6684 Blast hits to 6582 proteins in 1312 species: Archae - 0; Bacteria - 3263; Metazoa - 486; Fungi - 360; Plants - 2166; Viruses - 0; Other Eukaryotes - 409 (source: NCBI BLink). & (gnl|cdd|36451 : 548.0) no description available & (gnl|cdd|85071 : 192.0) no description available & (reliability: 1374.0) & (original description: Putative Sb05g007450, Description = Putative uncharacterized protein Sb05g007450, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf03422_455139-460698' '(at1g52190 : 650.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G16180.1); Has 5212 Blast hits to 5001 proteins in 870 species: Archae - 0; Bacteria - 1843; Metazoa - 575; Fungi - 389; Plants - 2143; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (gnl|cdd|36451 : 483.0) no description available & (gnl|cdd|85071 : 184.0) no description available & (reliability: 1300.0) & (original description: Putative NPF1.2, Description = Protein NRT1/ PTR FAMILY 1.2, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf03562_329276-336973' '(at1g59740 : 815.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G33440.1); Has 6789 Blast hits to 6649 proteins in 1324 species: Archae - 0; Bacteria - 3372; Metazoa - 487; Fungi - 362; Plants - 2181; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink). & (gnl|cdd|36451 : 541.0) no description available & (gnl|cdd|85071 : 192.0) no description available & (reliability: 1630.0) & (original description: Putative AIT1, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf03595_1233244-1263589' '(at1g68570 : 654.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 1 (TAIR:AT3G54140.1); Has 5938 Blast hits to 5565 proteins in 1029 species: Archae - 0; Bacteria - 2262; Metazoa - 736; Fungi - 385; Plants - 2206; Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink). & (gnl|cdd|36451 : 552.0) no description available & (gnl|cdd|85071 : 263.0) no description available & (reliability: 1308.0) & (original description: Putative ptr1, Description = Peptide transporter, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf03595_1805249-1812004' '(at1g65730 : 771.0) Arabidopsis thaliana metal-nicotianamine transporter YSL4; YELLOW STRIPE like 7 (YSL7); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 5 (TAIR:AT3G17650.1); Has 1836 Blast hits to 1794 proteins in 556 species: Archae - 19; Bacteria - 893; Metazoa - 0; Fungi - 266; Plants - 510; Viruses - 1; Other Eukaryotes - 147 (source: NCBI BLink). & (gnl|cdd|66819 : 341.0) no description available & (reliability: 1542.0) & (original description: Putative A17, Description = Putative uncharacterized protein A17, PFAM = PF03169)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf03624_465802-469167' '(gnl|cdd|37473 : 98.8) no description available & (at5g64410 : 93.2) oligopeptide transporter; oligopeptide transporter 4 (OPT4); CONTAINS InterPro DOMAIN/s: Tetrapeptide transporter, OPT1/isp4 (InterPro:IPR004648), Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: oligopeptide transporter 2 (TAIR:AT1G09930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative opt, Description = Oligopeptide transporter 4, PFAM = PF03169)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf03701_252297-257384' '(at1g52190 : 553.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G16180.1); Has 5212 Blast hits to 5001 proteins in 870 species: Archae - 0; Bacteria - 1843; Metazoa - 575; Fungi - 389; Plants - 2143; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (gnl|cdd|36451 : 474.0) no description available & (gnl|cdd|85071 : 183.0) no description available & (reliability: 1106.0) & (original description: Putative Sb03g035270, Description = Putative uncharacterized protein Sb03g035270, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf03949_295485-302809' '(at1g33440 : 691.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G59740.1); Has 6684 Blast hits to 6582 proteins in 1312 species: Archae - 0; Bacteria - 3263; Metazoa - 486; Fungi - 360; Plants - 2166; Viruses - 0; Other Eukaryotes - 409 (source: NCBI BLink). & (gnl|cdd|36451 : 546.0) no description available & (gnl|cdd|85071 : 188.0) no description available & (reliability: 1382.0) & (original description: Putative AIT1, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf04020_684432-692748' '(at1g65730 : 957.0) Arabidopsis thaliana metal-nicotianamine transporter YSL4; YELLOW STRIPE like 7 (YSL7); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 5 (TAIR:AT3G17650.1); Has 1836 Blast hits to 1794 proteins in 556 species: Archae - 19; Bacteria - 893; Metazoa - 0; Fungi - 266; Plants - 510; Viruses - 1; Other Eukaryotes - 147 (source: NCBI BLink). & (gnl|cdd|66819 : 395.0) no description available & (reliability: 1914.0) & (original description: Putative YSL12, Description = Probable metal-nicotianamine transporter YSL12, PFAM = PF03169)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf04143_100834-108728' '(at5g64410 : 1149.0) oligopeptide transporter; oligopeptide transporter 4 (OPT4); CONTAINS InterPro DOMAIN/s: Tetrapeptide transporter, OPT1/isp4 (InterPro:IPR004648), Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: oligopeptide transporter 2 (TAIR:AT1G09930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37473 : 1027.0) no description available & (gnl|cdd|66819 : 456.0) no description available & (reliability: 2298.0) & (original description: Putative OPT4, Description = Oligopeptide transporter 4, PFAM = PF03169)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf04160_31708-50244' '(at5g62050 : 347.0) essential factor for protein sorting and assembly into membranes; homolog of yeast oxidase assembly 1 (OXA1) (OXA1); FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein import into mitochondrial inner membrane, protein complex assembly; LOCATED IN: mitochondrion, mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Membrane insertion protein, OxaA/YidC, core (InterPro:IPR020001); BEST Arabidopsis thaliana protein match is: inner membrane protein OXA1-like (TAIR:AT2G46470.1); Has 6982 Blast hits to 6979 proteins in 2374 species: Archae - 0; Bacteria - 4991; Metazoa - 235; Fungi - 246; Plants - 190; Viruses - 0; Other Eukaryotes - 1320 (source: NCBI BLink). & (gnl|cdd|36453 : 202.0) no description available & (gnl|cdd|31050 : 123.0) no description available & (reliability: 694.0) & (original description: Putative OXA1, Description = Mitochondrial inner membrane protein OXA1, PFAM = PF02096)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf04407_231117-236354' '(at1g69850 : 656.0) Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots.; nitrate transporter 1:2 (NRT1:2); FUNCTIONS IN: transporter activity, calcium ion binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G27040.1); Has 5870 Blast hits to 5639 proteins in 1033 species: Archae - 0; Bacteria - 2327; Metazoa - 503; Fungi - 400; Plants - 2186; Viruses - 0; Other Eukaryotes - 454 (source: NCBI BLink). & (gnl|cdd|36451 : 511.0) no description available & (gnl|cdd|85071 : 231.0) no description available & (reliability: 1182.0) & (original description: Putative AIT1, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf04629_174679-180142' '(gnl|cdd|36451 : 548.0) no description available & (at5g01180 : 508.0) Encodes a dipeptide transporter expressed in pollen and ovules during early seed development. GFP-tagged PTR5 localizes to the plasma membrane.; peptide transporter 5 (PTR5); CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 1 (TAIR:AT3G54140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85071 : 249.0) no description available & (reliability: 1016.0) & (original description: Putative ptr1, Description = Peptide transporter, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf04829_145212-156094' '(at3g16180 : 569.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G52190.1); Has 5584 Blast hits to 5329 proteins in 963 species: Archae - 0; Bacteria - 2098; Metazoa - 610; Fungi - 414; Plants - 2170; Viruses - 0; Other Eukaryotes - 292 (source: NCBI BLink). & (gnl|cdd|36451 : 500.0) no description available & (gnl|cdd|85071 : 195.0) no description available & (reliability: 1138.0) & (original description: Putative Sb03g035270, Description = Putative uncharacterized protein Sb03g035270, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf05047_51220-59239' '(at1g52190 : 533.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G16180.1); Has 5212 Blast hits to 5001 proteins in 870 species: Archae - 0; Bacteria - 1843; Metazoa - 575; Fungi - 389; Plants - 2143; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (gnl|cdd|36451 : 460.0) no description available & (gnl|cdd|85071 : 166.0) no description available & (reliability: 1066.0) & (original description: Putative At1g52190, Description = Peptide/nitrate transporter plant, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf05137_10947-20289' '(at3g53960 : 730.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G37900.1); Has 6025 Blast hits to 5886 proteins in 1158 species: Archae - 0; Bacteria - 2442; Metazoa - 501; Fungi - 426; Plants - 2213; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink). & (gnl|cdd|36451 : 550.0) no description available & (gnl|cdd|85071 : 206.0) no description available & (reliability: 1460.0) & (original description: Putative ptr2, Description = Peptide/nitrate transporter plant, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf05189_4085-11351' '(at1g69870 : 688.0) Encodes a low affinity nitrate transporter NRT1.7. Expressed in phloem. Responsible for source-to-sink remobilization of nitrate.; nitrate transporter 1.7 (NRT1.7); FUNCTIONS IN: low affinity nitrate transmembrane transporter activity, transporter activity; INVOLVED IN: oligopeptide transport, response to salt stress, nitrate transport, low affinity nitrate transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1.6 (TAIR:AT1G27080.1); Has 4600 Blast hits to 4423 proteins in 820 species: Archae - 0; Bacteria - 1236; Metazoa - 519; Fungi - 428; Plants - 2212; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|36451 : 560.0) no description available & (gnl|cdd|85071 : 199.0) no description available & (reliability: 1376.0) & (original description: Putative GTR1, Description = Nitrate transporter, putative, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf05378_328567-337053' '(at1g65730 : 909.0) Arabidopsis thaliana metal-nicotianamine transporter YSL4; YELLOW STRIPE like 7 (YSL7); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 5 (TAIR:AT3G17650.1); Has 1836 Blast hits to 1794 proteins in 556 species: Archae - 19; Bacteria - 893; Metazoa - 0; Fungi - 266; Plants - 510; Viruses - 1; Other Eukaryotes - 147 (source: NCBI BLink). & (gnl|cdd|66819 : 386.0) no description available & (reliability: 1818.0) & (original description: Putative YSL7, Description = Probable metal-nicotianamine transporter YSL7, PFAM = PF03169)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf06158_79332-92245' '(gnl|cdd|36451 : 500.0) no description available & (at1g59740 : 406.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G33440.1); Has 6789 Blast hits to 6649 proteins in 1324 species: Archae - 0; Bacteria - 3372; Metazoa - 487; Fungi - 362; Plants - 2181; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink). & (gnl|cdd|85071 : 219.0) no description available & (reliability: 812.0) & (original description: Putative Sb03g034595, Description = Putative uncharacterized protein Sb03g034595, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf06280_239717-245790' '(at5g14940 : 493.0) Major facilitator superfamily protein; FUNCTIONS IN: amino acid transmembrane transporter activity, transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G01350.1); Has 5224 Blast hits to 5039 proteins in 856 species: Archae - 0; Bacteria - 1785; Metazoa - 536; Fungi - 394; Plants - 2164; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink). & (gnl|cdd|36451 : 414.0) no description available & (gnl|cdd|85071 : 175.0) no description available & (reliability: 986.0) & (original description: Putative PTR12, Description = Putative peptide/nitrate transporter, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf06423_374838-380176' '(gnl|cdd|37473 : 974.0) no description available & (at5g55930 : 897.0) oligopeptide transporter; oligopeptide transporter 1 (OPT1); CONTAINS InterPro DOMAIN/s: Tetrapeptide transporter, OPT1/isp4 (InterPro:IPR004648), Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: oligopeptide transporter 5 (TAIR:AT4G26590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66819 : 420.0) no description available & (reliability: 1794.0) & (original description: Putative opt, Description = Oligopeptide transporter, PFAM = PF03169)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf06698_314758-321462' '(at1g52190 : 508.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G16180.1); Has 5212 Blast hits to 5001 proteins in 870 species: Archae - 0; Bacteria - 1843; Metazoa - 575; Fungi - 389; Plants - 2143; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (gnl|cdd|36451 : 459.0) no description available & (gnl|cdd|85071 : 161.0) no description available & (reliability: 1016.0) & (original description: Putative PGSC0003DMG400029396, Description = Peptide/nitrate transporter plant, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf06868_50844-62724' '(at5g46050 : 800.0) Encodes a di- and tri-peptide transporter involved in responses to wounding, virulent bacterial pathogens, and high NaCl concentrations. The protein is predicted to have 12 transmembrane helicies.; peptide transporter 3 (PTR3); FUNCTIONS IN: dipeptide transporter activity, tripeptide transporter activity, transporter activity; INVOLVED IN: in 12 processes; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G46040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36451 : 586.0) no description available & (gnl|cdd|85071 : 259.0) no description available & (reliability: 1600.0) & (original description: Putative ptr1, Description = Peptide transporter PTR3-A, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf06957_36317-43475' '(at4g10770 : 1159.0) oligopeptide transporter; oligopeptide transporter 7 (OPT7); CONTAINS InterPro DOMAIN/s: Tetrapeptide transporter, OPT1/isp4 (InterPro:IPR004648), Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: oligopeptide transporter 1 (TAIR:AT4G27730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37473 : 1073.0) no description available & (gnl|cdd|66819 : 443.0) no description available & (reliability: 2318.0) & (original description: Putative OPT7, Description = Oligopeptide transporter 7, PFAM = PF03169)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf07001_36006-41310' '(at2g38100 : 316.0) proton-dependent oligopeptide transport (POT) family protein; FUNCTIONS IN: amino acid transmembrane transporter activity, uracil transmembrane transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109); BEST Arabidopsis thaliana protein match is: peptide transporter 5 (TAIR:AT5G01180.1); Has 2766 Blast hits to 2715 proteins in 326 species: Archae - 0; Bacteria - 547; Metazoa - 329; Fungi - 2; Plants - 1871; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|36451 : 226.0) no description available & (reliability: 632.0) & (original description: Putative NPF5.5, Description = Protein NRT1/ PTR FAMILY 5.5, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf07395_8102-13558' '(at5g62680 : 699.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to karrikin; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G47960.1); Has 3769 Blast hits to 3614 proteins in 562 species: Archae - 0; Bacteria - 609; Metazoa - 518; Fungi - 366; Plants - 2162; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (gnl|cdd|36451 : 534.0) no description available & (gnl|cdd|85071 : 181.0) no description available & (reliability: 1398.0) & (original description: Putative GTR1, Description = Nitrate transporter, putative, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf07395_15345-19572' '(at5g62680 : 706.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to karrikin; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G47960.1); Has 3769 Blast hits to 3614 proteins in 562 species: Archae - 0; Bacteria - 609; Metazoa - 518; Fungi - 366; Plants - 2162; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (gnl|cdd|36451 : 534.0) no description available & (gnl|cdd|85071 : 168.0) no description available & (reliability: 1412.0) & (original description: Putative GTR1, Description = Nitrate transporter, putative, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf07400_172054-179353' '(at1g59740 : 822.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G33440.1); Has 6789 Blast hits to 6649 proteins in 1324 species: Archae - 0; Bacteria - 3372; Metazoa - 487; Fungi - 362; Plants - 2181; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink). & (gnl|cdd|36451 : 528.0) no description available & (gnl|cdd|85071 : 193.0) no description available & (reliability: 1644.0) & (original description: Putative AIT1, Description = Peptide/nitrate transporter, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf09678_150762-155982' '(at3g54140 : 852.0) Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. GFP-tagged PTR1 localizes to the plasma membrane and has 8 to 11 predicted transmembrane domains. PTR1 is expressed in a number of different vascular tissues throughout the plant based on promoter:GUS expression analysis. ptr1 mutants have a lower dry weight than wild type plants when both are grown with Pro-Ala or Ala-Ala dipeptides as their nitrogen source, suggesting that PTR1 plays a role in dipeptide uptake in the roots. Furthermore N content of ptr1 mutants is lower than that of wild type plants when grown with Pro-Ala or a mixture of dipeptides as nitrogen source; peptide transporter 1 (PTR1); FUNCTIONS IN: dipeptide transporter activity, tripeptide transporter activity, transporter activity; INVOLVED IN: dipeptide transport, oligopeptide transport, nitrogen compound metabolic process, tripeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 40 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 5 (TAIR:AT5G01180.1); Has 8339 Blast hits to 7886 proteins in 1502 species: Archae - 0; Bacteria - 4164; Metazoa - 798; Fungi - 498; Plants - 2234; Viruses - 0; Other Eukaryotes - 645 (source: NCBI BLink). & (gnl|cdd|36451 : 642.0) no description available & (gnl|cdd|85071 : 314.0) no description available & (reliability: 1704.0) & (original description: Putative ptr1, Description = Peptide transporter, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf10309_218623-222590' '(at1g65730 : 752.0) Arabidopsis thaliana metal-nicotianamine transporter YSL4; YELLOW STRIPE like 7 (YSL7); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 5 (TAIR:AT3G17650.1); Has 1836 Blast hits to 1794 proteins in 556 species: Archae - 19; Bacteria - 893; Metazoa - 0; Fungi - 266; Plants - 510; Viruses - 1; Other Eukaryotes - 147 (source: NCBI BLink). & (gnl|cdd|66819 : 349.0) no description available & (reliability: 1504.0) & (original description: Putative YSL7, Description = Probable metal-nicotianamine transporter YSL7, PFAM = PF03169)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf10309_218876-221810' '(at1g65730 : 290.0) Arabidopsis thaliana metal-nicotianamine transporter YSL4; YELLOW STRIPE like 7 (YSL7); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 5 (TAIR:AT3G17650.1); Has 1836 Blast hits to 1794 proteins in 556 species: Archae - 19; Bacteria - 893; Metazoa - 0; Fungi - 266; Plants - 510; Viruses - 1; Other Eukaryotes - 147 (source: NCBI BLink). & (gnl|cdd|66819 : 154.0) no description available & (reliability: 580.0) & (original description: Putative Sb06g023000, Description = Putative uncharacterized protein Sb06g023000, PFAM = PF03169)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf10785_281844-286773' '(at5g13400 : 971.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 5 (TAIR:AT5G01180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36451 : 507.0) no description available & (gnl|cdd|85071 : 180.0) no description available & (reliability: 1942.0) & (original description: Putative ptr1, Description = Major facilitator superfamily protein, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf11361_63514-76588' '(at1g32450 : 575.0) Transmembrane nitrate transporter. Involved in xylem transport of nitrate from root to shoot. Induced in response to nitrate. Not involved in nitrate uptake. expressed in root pericycle cells.; nitrate transporter 1.5 (NRT1.5); CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: NITRATE TRANSPORTER 1.8 (TAIR:AT4G21680.1); Has 7755 Blast hits to 7381 proteins in 1434 species: Archae - 0; Bacteria - 3851; Metazoa - 707; Fungi - 433; Plants - 2214; Viruses - 0; Other Eukaryotes - 550 (source: NCBI BLink). & (gnl|cdd|36451 : 500.0) no description available & (gnl|cdd|85071 : 205.0) no description available & (reliability: 1150.0) & (original description: Putative ptr1, Description = Nitrate transporter 1.5, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf11978_448814-455333' '(at1g52190 : 719.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G16180.1); Has 5212 Blast hits to 5001 proteins in 870 species: Archae - 0; Bacteria - 1843; Metazoa - 575; Fungi - 389; Plants - 2143; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (gnl|cdd|36451 : 493.0) no description available & (gnl|cdd|85071 : 188.0) no description available & (reliability: 1438.0) & (original description: Putative NPF1.2, Description = Protein NRT1/ PTR FAMILY 1.2, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf12330_294971-301671' '(at4g16370 : 1211.0) Encodes an oligopeptide transporter involved in metal homeostasis.; oligopeptide transporter (OPT3); CONTAINS InterPro DOMAIN/s: Tetrapeptide transporter, OPT1/isp4 (InterPro:IPR004648), Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: oligopeptide transporter 2 (TAIR:AT1G09930.1); Has 1146 Blast hits to 1125 proteins in 109 species: Archae - 0; Bacteria - 26; Metazoa - 0; Fungi - 775; Plants - 337; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|37473 : 1025.0) no description available & (gnl|cdd|66819 : 457.0) no description available & (reliability: 2422.0) & (original description: Putative OPT3, Description = Oligopeptide transporter 3, PFAM = PF03169)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf13259_22380-25310' '(at3g45650 : 499.0) Encodes a nitrate efflux transporter NAXT1 (for NITRATE EXCRETION TRANSPORTER1). Localized to the plasma membrane. NAXT1 belongs to a subclass of seven NAXT members from the large NITRATE TRANSPORTER1/PEPTIDE TRANSPORTER family and is mainly expressed in the cortex of mature roots.; nitrate excretion transporter1 (NAXT1); CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G45660.1); Has 3186 Blast hits to 3120 proteins in 406 species: Archae - 0; Bacteria - 330; Metazoa - 443; Fungi - 265; Plants - 2106; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|36451 : 455.0) no description available & (gnl|cdd|85071 : 170.0) no description available & (reliability: 998.0) & (original description: Putative NAXT1, Description = Nitrate excretion transporter 1, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf13259_24871-35731' '(at3g45700 : 469.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G45710.1); Has 3331 Blast hits to 3241 proteins in 427 species: Archae - 0; Bacteria - 506; Metazoa - 449; Fungi - 129; Plants - 2109; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|36451 : 431.0) no description available & (gnl|cdd|85071 : 156.0) no description available & (reliability: 938.0) & (original description: Putative NAXT1, Description = Nitrate excretion transporter 1, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf14323_134603-143620' '(at5g62050 : 238.0) essential factor for protein sorting and assembly into membranes; homolog of yeast oxidase assembly 1 (OXA1) (OXA1); FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein import into mitochondrial inner membrane, protein complex assembly; LOCATED IN: mitochondrion, mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Membrane insertion protein, OxaA/YidC, core (InterPro:IPR020001); BEST Arabidopsis thaliana protein match is: inner membrane protein OXA1-like (TAIR:AT2G46470.1); Has 6982 Blast hits to 6979 proteins in 2374 species: Archae - 0; Bacteria - 4991; Metazoa - 235; Fungi - 246; Plants - 190; Viruses - 0; Other Eukaryotes - 1320 (source: NCBI BLink). & (gnl|cdd|36453 : 147.0) no description available & (gnl|cdd|31050 : 80.9) no description available & (reliability: 476.0) & (original description: Putative OXA1, Description = Mitochondrial inner membrane protein OXA1, PFAM = PF02096)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf14634_159732-164354' '(at3g45650 : 496.0) Encodes a nitrate efflux transporter NAXT1 (for NITRATE EXCRETION TRANSPORTER1). Localized to the plasma membrane. NAXT1 belongs to a subclass of seven NAXT members from the large NITRATE TRANSPORTER1/PEPTIDE TRANSPORTER family and is mainly expressed in the cortex of mature roots.; nitrate excretion transporter1 (NAXT1); CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G45660.1); Has 3186 Blast hits to 3120 proteins in 406 species: Archae - 0; Bacteria - 330; Metazoa - 443; Fungi - 265; Plants - 2106; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|36451 : 467.0) no description available & (gnl|cdd|85071 : 171.0) no description available & (reliability: 992.0) & (original description: Putative NAXT1, Description = Nitrate excretion transporter 1, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf15260_52271-62370' '(at1g22540 : 544.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G72140.1); Has 7676 Blast hits to 7510 proteins in 1439 species: Archae - 0; Bacteria - 3907; Metazoa - 586; Fungi - 484; Plants - 2183; Viruses - 0; Other Eukaryotes - 516 (source: NCBI BLink). & (gnl|cdd|36451 : 500.0) no description available & (gnl|cdd|85071 : 193.0) no description available & (reliability: 1088.0) & (original description: Putative Sb03g041190, Description = Putative uncharacterized protein Sb03g041190, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf16114_2321-7887' '(at1g22540 : 635.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G72140.1); Has 7676 Blast hits to 7510 proteins in 1439 species: Archae - 0; Bacteria - 3907; Metazoa - 586; Fungi - 484; Plants - 2183; Viruses - 0; Other Eukaryotes - 516 (source: NCBI BLink). & (gnl|cdd|36451 : 514.0) no description available & (gnl|cdd|85071 : 212.0) no description available & (reliability: 1270.0) & (original description: Putative ptr1, Description = Proton-dependent oligopeptide transport family protein, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf20506_24558-32956' '(at1g32450 : 833.0) Transmembrane nitrate transporter. Involved in xylem transport of nitrate from root to shoot. Induced in response to nitrate. Not involved in nitrate uptake. expressed in root pericycle cells.; nitrate transporter 1.5 (NRT1.5); CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: NITRATE TRANSPORTER 1.8 (TAIR:AT4G21680.1); Has 7755 Blast hits to 7381 proteins in 1434 species: Archae - 0; Bacteria - 3851; Metazoa - 707; Fungi - 433; Plants - 2214; Viruses - 0; Other Eukaryotes - 550 (source: NCBI BLink). & (gnl|cdd|36451 : 526.0) no description available & (gnl|cdd|85071 : 200.0) no description available & (reliability: 1666.0) & (original description: Putative ptr1, Description = Nitrate transporter 1.5, PFAM = PF00854)' T '34.13' 'transport.peptides and oligopeptides' 'niben101scf35572_113008-118089' '(at5g46050 : 689.0) Encodes a di- and tri-peptide transporter involved in responses to wounding, virulent bacterial pathogens, and high NaCl concentrations. The protein is predicted to have 12 transmembrane helicies.; peptide transporter 3 (PTR3); FUNCTIONS IN: dipeptide transporter activity, tripeptide transporter activity, transporter activity; INVOLVED IN: in 12 processes; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G46040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36451 : 565.0) no description available & (gnl|cdd|85071 : 265.0) no description available & (reliability: 1378.0) & (original description: Putative ptr1, Description = Peptide transporter, PFAM = PF00854)' T '34.14' 'transport.unspecified cations' 'nbv0.3scaffold2362_1-22654' '(at5g23630 : 1858.0) A member of the eukaryotic type V subfamily (P5) of P-type ATPase cation pumps; MIA is most similar to the human P5 ATPase ATY2(44% identity) and to Spf1p from S. cerevisiae (41% identity). Highly abundant in the endoplasmic reticulum and small vesicles of developing pollen grains and tapetum cells. T-DNA insertional mutants of MIA suffer from imbalances in cation homeostasis and exhibit a severe reduction in fertility. Mutant microspores fail to separate from tetrads and pollen grains are fragile with an abnormal morphology and altered cell wall structure. MIA is also named PDR2 and was shown to be required for proper expression of SCARECROW (SCR), a key regulator of root patterning, and for stem-cell maintenance in Pi-deprived roots.; phosphate deficiency response 2 (PDR2); FUNCTIONS IN: cation-transporting ATPase activity; INVOLVED IN: in 6 processes; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, unknown pump specificity (type V) (InterPro:IPR006544), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: calcium ATPase 2 (TAIR:AT4G37640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35430 : 1519.0) no description available & (gnl|cdd|30822 : 371.0) no description available & (q2qmx9|aca1_orysa : 89.7) Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) - Oryza sativa (Rice) & (reliability: 3716.0) & (original description: Putative PDR2, Description = Probable manganese-transporting ATPase PDR2, PFAM = PF00702;PF00122)' T '34.14' 'transport.unspecified cations' 'nbv0.3scaffold17590_4425-26019' '(at2g26900 : 338.0) Sodium Bile acid symporter family; FUNCTIONS IN: transporter activity, bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport, organic anion transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657), Bile acid transporter (InterPro:IPR004710); BEST Arabidopsis thaliana protein match is: Sodium Bile acid symporter family (TAIR:AT1G78560.1); Has 5023 Blast hits to 5015 proteins in 1109 species: Archae - 92; Bacteria - 2706; Metazoa - 448; Fungi - 4; Plants - 268; Viruses - 0; Other Eukaryotes - 1505 (source: NCBI BLink). & (gnl|cdd|37929 : 168.0) no description available & (gnl|cdd|30734 : 141.0) no description available & (reliability: 676.0) & (original description: Putative BAT1, Description = Bile acid:sodium symporter, PFAM = PF01758)' T '34.14' 'transport.unspecified cations' 'nbv0.3scaffold21972_1903-7616' '(p27081|adt2_soltu : 650.0) ADP,ATP carrier protein, mitochondrial precursor (ADP/ATP translocase) (Adenine nucleotide translocator) (ANT) (Fragment) - Solanum tuberosum (Potato) & (at3g08580 : 563.0) mitochondrial ADP/ATP carrier; ADP/ATP carrier 1 (AAC1); FUNCTIONS IN: binding, copper ion binding, ATP:ADP antiporter activity; INVOLVED IN: transport, purine nucleotide transport; LOCATED IN: in 10 components; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 2 (TAIR:AT5G13490.2); Has 19858 Blast hits to 12534 proteins in 484 species: Archae - 0; Bacteria - 0; Metazoa - 8967; Fungi - 5060; Plants - 3882; Viruses - 0; Other Eukaryotes - 1949 (source: NCBI BLink). & (gnl|cdd|35968 : 435.0) no description available & (gnl|cdd|84566 : 90.3) no description available & (reliability: 1122.0) & (original description: Putative ANT, Description = ADP,ATP carrier protein, mitochondrial, PFAM = PF00153;PF00153;PF00153)' T '34.14' 'transport.unspecified cations' 'nbv0.3scaffold26022_25555-28068' '(at2g26900 : 148.0) Sodium Bile acid symporter family; FUNCTIONS IN: transporter activity, bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport, organic anion transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657), Bile acid transporter (InterPro:IPR004710); BEST Arabidopsis thaliana protein match is: Sodium Bile acid symporter family (TAIR:AT1G78560.1); Has 5023 Blast hits to 5015 proteins in 1109 species: Archae - 92; Bacteria - 2706; Metazoa - 448; Fungi - 4; Plants - 268; Viruses - 0; Other Eukaryotes - 1505 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative BAT1, Description = Bile acid-sodium symporter family protein 2, PFAM = PF01758)' T '34.14' 'transport.unspecified cations' 'nbv0.3scaffold64829_2717-10600' '(at5g55470 : 589.0) member of Sodium proton exchanger family; Na+/H+ (sodium hydrogen) exchanger 3 (NHX3); CONTAINS InterPro DOMAIN/s: Na+/H+ exchanger, subfamily (InterPro:IPR004709), Cation/H+ exchanger, conserved region (InterPro:IPR018422), Cation/H+ exchanger (InterPro:IPR006153), Na+/H+ exchanger, isoforms 1-4, conserved region (InterPro:IPR018407); BEST Arabidopsis thaliana protein match is: sodium hydrogen exchanger 2 (TAIR:AT3G05030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37176 : 397.0) no description available & (gnl|cdd|30375 : 112.0) no description available & (reliability: 1178.0) & (original description: Putative NHX4, Description = Sodium/hydrogen exchanger 4, PFAM = PF00999;PF00999)' T '34.14' 'transport.unspecified cations' 'nbv0.3scaffold70868_1-6164' '(at1g10830 : 500.0) Encodes a variant protein of the 15-cis-zeta-carotene isomase (Z-ISO) locus lacking Z-ISO activity.; 15-cis-zeta-carotene isomerase (Z-ISO); FUNCTIONS IN: 9,15,9'-tri-cis-zeta-carotene isomerase activity; INVOLVED IN: carotene biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NnrU (InterPro:IPR009915); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|33851 : 170.0) no description available & (reliability: 1000.0) & (original description: Putative nnrU, Description = 15-cis-zeta-carotene isomerase, PFAM = PF07298)' T '34.14' 'transport.unspecified cations' 'nbv0.3scaffold74116_1-7143' '(at3g05030 : 683.0) member of Sodium proton exchanger family; sodium hydrogen exchanger 2 (NHX2); FUNCTIONS IN: sodium:hydrogen antiporter activity, sodium ion transmembrane transporter activity; INVOLVED IN: cation transport, sodium ion transport, regulation of pH, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger, conserved region (InterPro:IPR018422), Cation/H+ exchanger (InterPro:IPR006153), Na+/H+ exchanger, isoforms 1-4, conserved region (InterPro:IPR018407); BEST Arabidopsis thaliana protein match is: Na+/H+ exchanger 1 (TAIR:AT5G27150.1); Has 5239 Blast hits to 5232 proteins in 1555 species: Archae - 25; Bacteria - 3481; Metazoa - 811; Fungi - 131; Plants - 434; Viruses - 0; Other Eukaryotes - 357 (source: NCBI BLink). & (gnl|cdd|37176 : 515.0) no description available & (gnl|cdd|30375 : 131.0) no description available & (reliability: 1366.0) & (original description: Putative nhx4, Description = Sodium/hydrogen exchanger, PFAM = PF00999)' T '34.14' 'transport.unspecified cations' 'nbv0.3scaffold74168_78-5555' '(at3g25410 : 474.0) Sodium Bile acid symporter family; FUNCTIONS IN: transporter activity, bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657); BEST Arabidopsis thaliana protein match is: bile acid transporter 5 (TAIR:AT4G12030.2); Has 4132 Blast hits to 4124 proteins in 1073 species: Archae - 57; Bacteria - 2245; Metazoa - 386; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 1216 (source: NCBI BLink). & (gnl|cdd|37929 : 184.0) no description available & (gnl|cdd|30734 : 161.0) no description available & (reliability: 948.0) & (original description: Putative BAT1, Description = Putative sodium-dependent transporter yocS, PFAM = PF01758)' T '34.14' 'transport.unspecified cations' 'nbv0.5scaffold11_1924340-1926729' '(gnl|cdd|37873 : 110.0) no description available & (at5g64560 : 109.0) Transmembrane magnesium transporter. One of 9 family members.; magnesium transporter 9 (MGT9); FUNCTIONS IN: magnesium ion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: transmembrane transport, metal ion transport; LOCATED IN: membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); BEST Arabidopsis thaliana protein match is: magnesium transporter 7 (TAIR:AT5G09690.2); Has 775 Blast hits to 761 proteins in 168 species: Archae - 2; Bacteria - 17; Metazoa - 61; Fungi - 196; Plants - 398; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative MGT1, Description = Magnesium transporter MRS2/LPE10, PFAM = )' T '34.14' 'transport.unspecified cations' 'nbv0.5scaffold113_752038-758523' '(at1g78560 : 167.0) Sodium Bile acid symporter family; FUNCTIONS IN: transporter activity, bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657); BEST Arabidopsis thaliana protein match is: Sodium Bile acid symporter family (TAIR:AT2G26900.1); Has 4745 Blast hits to 4739 proteins in 1061 species: Archae - 72; Bacteria - 2461; Metazoa - 464; Fungi - 2; Plants - 257; Viruses - 0; Other Eukaryotes - 1489 (source: NCBI BLink). & (gnl|cdd|30734 : 129.0) no description available & (gnl|cdd|37929 : 106.0) no description available & (reliability: 334.0) & (original description: Putative tll1126, Description = Putative sodium-dependent transporter yocS, PFAM = PF01758)' T '34.14' 'transport.unspecified cations' 'nbv0.5scaffold169_457168-462818' '(at4g05120 : 567.0) Encodes an equilibrative nucleoside transporter AtENT3. Mutations of this locus allow mutants to grow on uridine analogue fluorouridine.; FUDR RESISTANT 1 (FUR1); FUNCTIONS IN: nucleoside transmembrane transporter activity; INVOLVED IN: nucleoside transport, pyrimidine nucleoside transport; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Delayed-early response protein/equilibrative nucleoside transporter (InterPro:IPR002259), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: equilibrative nucleoside transporter 6 (TAIR:AT4G05110.1); Has 945 Blast hits to 913 proteins in 187 species: Archae - 0; Bacteria - 2; Metazoa - 416; Fungi - 101; Plants - 211; Viruses - 0; Other Eukaryotes - 215 (source: NCBI BLink). & (gnl|cdd|36692 : 324.0) no description available & (gnl|cdd|85636 : 91.1) no description available & (reliability: 1134.0) & (original description: Putative ENT3, Description = Equilibrative nucleotide transporter 3, PFAM = PF01733)' T '34.14' 'transport.unspecified cations' 'nbv0.5scaffold872_462588-473436' '(at2g01980 : 334.0) Encodes a plasma membrane-localized Na+/H+ antiporter SOS1. Functions in the extrusion of toxic Na+ from cells and is essential for plant salt tolerance. Has 12 predicted transmembrane domains in the N-terminal region and a long cytoplasmic tail of approx. 700 aa at the C-terminal side. SOS1 interacts through its predicted cytoplasmic tail with RCD1, a regulator of oxidative-stress responses, suggesting that SOS1 might function in oxidative-stress tolerance.; SALT OVERLY SENSITIVE 1 (SOS1); FUNCTIONS IN: sodium:hydrogen antiporter activity; INVOLVED IN: in 7 processes; LOCATED IN: plasma membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cation/H+ exchanger, conserved region (InterPro:IPR018422), Cation/H+ exchanger (InterPro:IPR006153), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Na+/H+ exchanger, isoforms 7/8, conserved region (InterPro:IPR018418); BEST Arabidopsis thaliana protein match is: Na+/H+ exchanger 8 (TAIR:AT1G14660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37176 : 221.0) no description available & (gnl|cdd|30375 : 109.0) no description available & (reliability: 668.0) & (original description: Putative nhaK, Description = Salt overly sensitive 1, PFAM = PF00999)' T '34.14' 'transport.unspecified cations' 'nbv0.5scaffold873_496789-505293' '(at2g03620 : 479.0) Transmembrane magnesium transporter. One of nine family members.; magnesium transporter 3 (MGT3); BEST Arabidopsis thaliana protein match is: magnesium transporter 2 (TAIR:AT1G16010.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37873 : 412.0) no description available & (gnl|cdd|85522 : 170.0) no description available & (reliability: 958.0) & (original description: Putative MGT1, Description = Magnesium transporter MRS2/LPE10, PFAM = )' T '34.14' 'transport.unspecified cations' 'nbv0.5scaffold1050_389201-393463' '(at1g02630 : 457.0) Nucleoside transporter family protein; FUNCTIONS IN: nucleoside transmembrane transporter activity; INVOLVED IN: transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Delayed-early response protein/equilibrative nucleoside transporter (InterPro:IPR002259); BEST Arabidopsis thaliana protein match is: equilibrative nucleotide transporter 1 (TAIR:AT1G70330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36692 : 287.0) no description available & (gnl|cdd|85636 : 148.0) no description available & (reliability: 914.0) & (original description: Putative ETN8, Description = Equilibrative nucleotide transporter 8, PFAM = PF01733;PF01733)' T '34.14' 'transport.unspecified cations' 'nbv0.5scaffold1397_278281-284810' '(at3g25410 : 397.0) Sodium Bile acid symporter family; FUNCTIONS IN: transporter activity, bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657); BEST Arabidopsis thaliana protein match is: bile acid transporter 5 (TAIR:AT4G12030.2); Has 4132 Blast hits to 4124 proteins in 1073 species: Archae - 57; Bacteria - 2245; Metazoa - 386; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 1216 (source: NCBI BLink). & (gnl|cdd|37929 : 165.0) no description available & (gnl|cdd|30734 : 145.0) no description available & (reliability: 794.0) & (original description: Putative BAT1, Description = Putative sodium-dependent transporter yocS, PFAM = PF01758)' T '34.14' 'transport.unspecified cations' 'nbv0.5scaffold2273_76928-89294' '(at1g78560 : 471.0) Sodium Bile acid symporter family; FUNCTIONS IN: transporter activity, bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657); BEST Arabidopsis thaliana protein match is: Sodium Bile acid symporter family (TAIR:AT2G26900.1); Has 4745 Blast hits to 4739 proteins in 1061 species: Archae - 72; Bacteria - 2461; Metazoa - 464; Fungi - 2; Plants - 257; Viruses - 0; Other Eukaryotes - 1489 (source: NCBI BLink). & (gnl|cdd|37929 : 234.0) no description available & (gnl|cdd|30734 : 224.0) no description available & (reliability: 942.0) & (original description: Putative BASS1, Description = Probable sodium/metabolite cotransporter BASS1, chloroplastic, PFAM = PF01758)' T '34.14' 'transport.unspecified cations' 'nbv0.5scaffold2512_294821-304754' '(at5g22830 : 510.0) Transmembrane magnesium transporter. One of nine family members.; magnesium (Mg) transporter 10 (MGT10); FUNCTIONS IN: magnesium ion transmembrane transporter activity; INVOLVED IN: magnesium ion transport; LOCATED IN: chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); BEST Arabidopsis thaliana protein match is: magnesium transporter 7 (TAIR:AT5G09690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37873 : 285.0) no description available & (gnl|cdd|85522 : 150.0) no description available & (reliability: 1020.0) & (original description: Putative mgt1, Description = Putative magnesium transporter, PFAM = )' T '34.14' 'transport.unspecified cations' 'nbv0.5scaffold4193_192478-197967' '(at3g25410 : 473.0) Sodium Bile acid symporter family; FUNCTIONS IN: transporter activity, bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657); BEST Arabidopsis thaliana protein match is: bile acid transporter 5 (TAIR:AT4G12030.2); Has 4132 Blast hits to 4124 proteins in 1073 species: Archae - 57; Bacteria - 2245; Metazoa - 386; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 1216 (source: NCBI BLink). & (gnl|cdd|37929 : 184.0) no description available & (gnl|cdd|30734 : 161.0) no description available & (reliability: 946.0) & (original description: Putative BASS3, Description = Probable sodium/metabolite cotransporter BASS3, chloroplastic, PFAM = PF01758)' T '34.14' 'transport.unspecified cations' 'nbv0.5scaffold5161_84434-89550' '(at4g28390 : 530.0) Encodes a mitochondrial ADP/ATP carrier protein. Shown in heterologous systems to be located in the plasma membrane. Has comparable affinity for ADP and ATP (in E.coli).; ADP/ATP carrier 3 (AAC3); FUNCTIONS IN: binding, ATP:ADP antiporter activity; INVOLVED IN: transport, mitochondrial transport, purine nucleotide transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 2 (TAIR:AT5G13490.2); Has 20286 Blast hits to 12392 proteins in 480 species: Archae - 0; Bacteria - 0; Metazoa - 9416; Fungi - 5054; Plants - 3787; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (p04709|adt1_maize : 510.0) ADP,ATP carrier protein 1, mitochondrial precursor (ADP/ATP translocase 1) (Adenine nucleotide translocator 1) (ANT 1) - Zea mays (Maize) & (gnl|cdd|35968 : 433.0) no description available & (gnl|cdd|84566 : 92.3) no description available & (reliability: 992.0) & (original description: Putative AAC1, Description = ADP,ATP carrier protein 1, PFAM = PF00153;PF00153;PF00153)' T '34.14' 'transport.unspecified cations' 'nbv0.5scaffold5929_79086-100765' '(at2g26900 : 424.0) Sodium Bile acid symporter family; FUNCTIONS IN: transporter activity, bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport, organic anion transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657), Bile acid transporter (InterPro:IPR004710); BEST Arabidopsis thaliana protein match is: Sodium Bile acid symporter family (TAIR:AT1G78560.1); Has 5023 Blast hits to 5015 proteins in 1109 species: Archae - 92; Bacteria - 2706; Metazoa - 448; Fungi - 4; Plants - 268; Viruses - 0; Other Eukaryotes - 1505 (source: NCBI BLink). & (gnl|cdd|37929 : 208.0) no description available & (gnl|cdd|30734 : 178.0) no description available & (reliability: 848.0) & (original description: Putative BASS2, Description = Sodium/pyruvate cotransporter BASS2, chloroplastic, PFAM = PF01758)' T '34.14' 'transport.unspecified cations' 'nbv0.5scaffold7398_602-6359' '(at2g04305 : 470.0) Magnesium transporter CorA-like family protein; FUNCTIONS IN: metal ion transmembrane transporter activity; INVOLVED IN: metal ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30943 : 81.9) no description available & (reliability: 940.0) & (original description: Putative Ccrd_004578, Description = Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB, PFAM = PF01544)' T '34.14' 'transport.unspecified cations' 'niben044scf00002535ctg018_10964-17752' '(at3g20660 : 628.0) organic cation/carnitine transporter4 (4-Oct); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: chloroplast thylakoid membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: pseudogene (TAIR:AT1G73220.1); Has 27723 Blast hits to 27519 proteins in 2032 species: Archae - 544; Bacteria - 15020; Metazoa - 4940; Fungi - 4480; Plants - 1745; Viruses - 0; Other Eukaryotes - 994 (source: NCBI BLink). & (gnl|cdd|35476 : 272.0) no description available & (gnl|cdd|84502 : 130.0) no description available & (reliability: 1256.0) & (original description: Putative 38261, Description = Organic cation/carnitine transporter 4, PFAM = PF00083)' T '34.14' 'transport.unspecified cations' 'niben044scf00005777ctg009_1-3426' '(at3g14070 : 561.0) Involved in cation (K, Na and Mn) homeostasis and transport; cation exchanger 9 (CAX9); CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837); BEST Arabidopsis thaliana protein match is: cation calcium exchanger 4 (TAIR:AT1G54115.1); Has 3863 Blast hits to 3216 proteins in 856 species: Archae - 67; Bacteria - 789; Metazoa - 1939; Fungi - 299; Plants - 225; Viruses - 0; Other Eukaryotes - 544 (source: NCBI BLink). & (gnl|cdd|37610 : 435.0) no description available & (reliability: 1118.0) & (original description: Putative CCX2, Description = Cation/calcium exchanger 2, PFAM = PF01699;PF01699)' T '34.14' 'transport.unspecified cations' 'niben044scf00007593ctg001_7192-13835' '(at1g78560 : 166.0) Sodium Bile acid symporter family; FUNCTIONS IN: transporter activity, bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657); BEST Arabidopsis thaliana protein match is: Sodium Bile acid symporter family (TAIR:AT2G26900.1); Has 4745 Blast hits to 4739 proteins in 1061 species: Archae - 72; Bacteria - 2461; Metazoa - 464; Fungi - 2; Plants - 257; Viruses - 0; Other Eukaryotes - 1489 (source: NCBI BLink). & (gnl|cdd|30734 : 128.0) no description available & (gnl|cdd|37929 : 104.0) no description available & (reliability: 332.0) & (original description: Putative tll1126, Description = Putative sodium-dependent transporter yocS, PFAM = PF01758)' T '34.14' 'transport.unspecified cations' 'niben044scf00009407ctg010_22340-28790' '(at2g04305 : 654.0) Magnesium transporter CorA-like family protein; FUNCTIONS IN: metal ion transmembrane transporter activity; INVOLVED IN: metal ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30943 : 87.3) no description available & (reliability: 1308.0) & (original description: Putative At2g04305, Description = At2g04305/T23O15.7, PFAM = PF01544)' T '34.14' 'transport.unspecified cations' 'niben044scf00010134ctg015_10755-15661' '(at1g16010 : 618.0) Transmembrane magnesium transporter. One of nine family members.; magnesium transporter 2 (MGT2); FUNCTIONS IN: magnesium ion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: transmembrane transport, metal ion transport; LOCATED IN: membrane; EXPRESSED IN: 32 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); BEST Arabidopsis thaliana protein match is: magnesium transporter 1 (TAIR:AT1G80900.1). & (gnl|cdd|37873 : 467.0) no description available & (gnl|cdd|85522 : 152.0) no description available & (reliability: 1236.0) & (original description: Putative MGT1, Description = Magnesium transporter MRS2/LPE10, PFAM = PF01544)' T '34.14' 'transport.unspecified cations' 'niben044scf00010599ctg000_1-43174' '(at2g01980 : 1256.0) Encodes a plasma membrane-localized Na+/H+ antiporter SOS1. Functions in the extrusion of toxic Na+ from cells and is essential for plant salt tolerance. Has 12 predicted transmembrane domains in the N-terminal region and a long cytoplasmic tail of approx. 700 aa at the C-terminal side. SOS1 interacts through its predicted cytoplasmic tail with RCD1, a regulator of oxidative-stress responses, suggesting that SOS1 might function in oxidative-stress tolerance.; SALT OVERLY SENSITIVE 1 (SOS1); FUNCTIONS IN: sodium:hydrogen antiporter activity; INVOLVED IN: in 7 processes; LOCATED IN: plasma membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cation/H+ exchanger, conserved region (InterPro:IPR018422), Cation/H+ exchanger (InterPro:IPR006153), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Na+/H+ exchanger, isoforms 7/8, conserved region (InterPro:IPR018418); BEST Arabidopsis thaliana protein match is: Na+/H+ exchanger 8 (TAIR:AT1G14660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37176 : 319.0) no description available & (gnl|cdd|30375 : 208.0) no description available & (reliability: 2512.0) & (original description: Putative sos1, Description = Plasmalemma Na+/H+ antiporter, PFAM = PF00999)' T '34.14' 'transport.unspecified cations' 'niben044scf00010849ctg012_3789-8740' '(at3g05030 : 541.0) member of Sodium proton exchanger family; sodium hydrogen exchanger 2 (NHX2); FUNCTIONS IN: sodium:hydrogen antiporter activity, sodium ion transmembrane transporter activity; INVOLVED IN: cation transport, sodium ion transport, regulation of pH, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger, conserved region (InterPro:IPR018422), Cation/H+ exchanger (InterPro:IPR006153), Na+/H+ exchanger, isoforms 1-4, conserved region (InterPro:IPR018407); BEST Arabidopsis thaliana protein match is: Na+/H+ exchanger 1 (TAIR:AT5G27150.1); Has 5239 Blast hits to 5232 proteins in 1555 species: Archae - 25; Bacteria - 3481; Metazoa - 811; Fungi - 131; Plants - 434; Viruses - 0; Other Eukaryotes - 357 (source: NCBI BLink). & (gnl|cdd|37176 : 389.0) no description available & (gnl|cdd|30375 : 112.0) no description available & (reliability: 1082.0) & (original description: Putative NHXI, Description = Na/H antiporter, PFAM = PF00999)' T '34.14' 'transport.unspecified cations' 'niben044scf00011366ctg006_1-4941' '(at5g22830 : 256.0) Transmembrane magnesium transporter. One of nine family members.; magnesium (Mg) transporter 10 (MGT10); FUNCTIONS IN: magnesium ion transmembrane transporter activity; INVOLVED IN: magnesium ion transport; LOCATED IN: chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); BEST Arabidopsis thaliana protein match is: magnesium transporter 7 (TAIR:AT5G09690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37873 : 126.0) no description available & (reliability: 512.0) & (original description: Putative GMN10, Description = Magnesium transporter MRS2-11, chloroplastic, PFAM = )' T '34.14' 'transport.unspecified cations' 'niben044scf00011366ctg008_1-4141' '(at5g22830 : 180.0) Transmembrane magnesium transporter. One of nine family members.; magnesium (Mg) transporter 10 (MGT10); FUNCTIONS IN: magnesium ion transmembrane transporter activity; INVOLVED IN: magnesium ion transport; LOCATED IN: chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); BEST Arabidopsis thaliana protein match is: magnesium transporter 7 (TAIR:AT5G09690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37873 : 113.0) no description available & (reliability: 360.0) & (original description: Putative mgt1, Description = Putative magnesium transporter, PFAM = )' T '34.14' 'transport.unspecified cations' 'niben044scf00013607ctg020_687-8278' '(at5g55470 : 578.0) member of Sodium proton exchanger family; Na+/H+ (sodium hydrogen) exchanger 3 (NHX3); CONTAINS InterPro DOMAIN/s: Na+/H+ exchanger, subfamily (InterPro:IPR004709), Cation/H+ exchanger, conserved region (InterPro:IPR018422), Cation/H+ exchanger (InterPro:IPR006153), Na+/H+ exchanger, isoforms 1-4, conserved region (InterPro:IPR018407); BEST Arabidopsis thaliana protein match is: sodium hydrogen exchanger 2 (TAIR:AT3G05030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37176 : 400.0) no description available & (gnl|cdd|30375 : 112.0) no description available & (reliability: 1156.0) & (original description: Putative NHX4, Description = Sodium/hydrogen exchanger 4, PFAM = PF00999;PF00999)' T '34.14' 'transport.unspecified cations' 'niben044scf00014430ctg003_9491-12837' '(at1g16390 : 300.0) organic cation/carnitine transporter 3 (3-Oct); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: organic cation/carnitine transporter 2 (TAIR:AT1G79360.1); Has 22920 Blast hits to 22877 proteins in 2010 species: Archae - 415; Bacteria - 11427; Metazoa - 4445; Fungi - 4126; Plants - 1629; Viruses - 0; Other Eukaryotes - 878 (source: NCBI BLink). & (gnl|cdd|35476 : 173.0) no description available & (gnl|cdd|84502 : 104.0) no description available & (reliability: 600.0) & (original description: Putative BnaC08g16940D, Description = BnaC08g16940D protein, PFAM = PF07690)' T '34.14' 'transport.unspecified cations' 'niben044scf00016075ctg008_8390-13640' '(at5g64560 : 249.0) Transmembrane magnesium transporter. One of 9 family members.; magnesium transporter 9 (MGT9); FUNCTIONS IN: magnesium ion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: transmembrane transport, metal ion transport; LOCATED IN: membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); BEST Arabidopsis thaliana protein match is: magnesium transporter 7 (TAIR:AT5G09690.2); Has 775 Blast hits to 761 proteins in 168 species: Archae - 2; Bacteria - 17; Metazoa - 61; Fungi - 196; Plants - 398; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (gnl|cdd|37873 : 247.0) no description available & (gnl|cdd|85522 : 137.0) no description available & (reliability: 498.0) & (original description: Putative MGT1, Description = Magnesium transporter MRS2/LPE10, PFAM = PF01544)' T '34.14' 'transport.unspecified cations' 'niben044scf00018556ctg000_1-4881' '(at4g05120 : 435.0) Encodes an equilibrative nucleoside transporter AtENT3. Mutations of this locus allow mutants to grow on uridine analogue fluorouridine.; FUDR RESISTANT 1 (FUR1); FUNCTIONS IN: nucleoside transmembrane transporter activity; INVOLVED IN: nucleoside transport, pyrimidine nucleoside transport; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Delayed-early response protein/equilibrative nucleoside transporter (InterPro:IPR002259), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: equilibrative nucleoside transporter 6 (TAIR:AT4G05110.1); Has 945 Blast hits to 913 proteins in 187 species: Archae - 0; Bacteria - 2; Metazoa - 416; Fungi - 101; Plants - 211; Viruses - 0; Other Eukaryotes - 215 (source: NCBI BLink). & (gnl|cdd|36692 : 274.0) no description available & (gnl|cdd|85636 : 90.0) no description available & (reliability: 870.0) & (original description: Putative ENT3, Description = Equilibrative nucleotide transporter 3, PFAM = PF01733)' T '34.14' 'transport.unspecified cations' 'niben044scf00019101ctg002_13566-17872' '(at4g28390 : 505.0) Encodes a mitochondrial ADP/ATP carrier protein. Shown in heterologous systems to be located in the plasma membrane. Has comparable affinity for ADP and ATP (in E.coli).; ADP/ATP carrier 3 (AAC3); FUNCTIONS IN: binding, ATP:ADP antiporter activity; INVOLVED IN: transport, mitochondrial transport, purine nucleotide transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 2 (TAIR:AT5G13490.2); Has 20286 Blast hits to 12392 proteins in 480 species: Archae - 0; Bacteria - 0; Metazoa - 9416; Fungi - 5054; Plants - 3787; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (p25083|adt1_soltu : 492.0) ADP,ATP carrier protein, mitochondrial precursor (ADP/ATP translocase) (Adenine nucleotide translocator) (ANT) - Solanum tuberosum (Potato) & (gnl|cdd|35968 : 430.0) no description available & (gnl|cdd|84566 : 91.5) no description available & (reliability: 966.0) & (original description: Putative AAC3, Description = ADP,ATP carrier protein 3, mitochondrial, PFAM = PF00153;PF00153;PF00153)' T '34.14' 'transport.unspecified cations' 'niben044scf00028393ctg006_18291-20295' '(at4g28390 : 154.0) Encodes a mitochondrial ADP/ATP carrier protein. Shown in heterologous systems to be located in the plasma membrane. Has comparable affinity for ADP and ATP (in E.coli).; ADP/ATP carrier 3 (AAC3); FUNCTIONS IN: binding, ATP:ADP antiporter activity; INVOLVED IN: transport, mitochondrial transport, purine nucleotide transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 2 (TAIR:AT5G13490.2); Has 20286 Blast hits to 12392 proteins in 480 species: Archae - 0; Bacteria - 0; Metazoa - 9416; Fungi - 5054; Plants - 3787; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (p27081|adt2_soltu : 142.0) ADP,ATP carrier protein, mitochondrial precursor (ADP/ATP translocase) (Adenine nucleotide translocator) (ANT) (Fragment) - Solanum tuberosum (Potato) & (gnl|cdd|35968 : 123.0) no description available & (reliability: 290.0) & (original description: Putative aac, Description = ADP,ATP carrier protein, PFAM = PF00153)' T '34.14' 'transport.unspecified cations' 'niben044scf00036493ctg005_8540-13951' '(at5g22830 : 188.0) Transmembrane magnesium transporter. One of nine family members.; magnesium (Mg) transporter 10 (MGT10); FUNCTIONS IN: magnesium ion transmembrane transporter activity; INVOLVED IN: magnesium ion transport; LOCATED IN: chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); BEST Arabidopsis thaliana protein match is: magnesium transporter 7 (TAIR:AT5G09690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37873 : 109.0) no description available & (reliability: 376.0) & (original description: Putative GMN10, Description = Magnesium transporter MRS2-11, chloroplastic, PFAM = )' T '34.14' 'transport.unspecified cations' 'niben044scf00045299ctg002_3668-10565' '(at3g25410 : 469.0) Sodium Bile acid symporter family; FUNCTIONS IN: transporter activity, bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657); BEST Arabidopsis thaliana protein match is: bile acid transporter 5 (TAIR:AT4G12030.2); Has 4132 Blast hits to 4124 proteins in 1073 species: Archae - 57; Bacteria - 2245; Metazoa - 386; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 1216 (source: NCBI BLink). & (gnl|cdd|37929 : 180.0) no description available & (gnl|cdd|30734 : 158.0) no description available & (reliability: 938.0) & (original description: Putative BASS3, Description = Probable sodium/metabolite cotransporter BASS3, chloroplastic, PFAM = PF01758)' T '34.14' 'transport.unspecified cations' 'niben044scf00048949ctg001_1-7480' '(at1g78560 : 417.0) Sodium Bile acid symporter family; FUNCTIONS IN: transporter activity, bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657); BEST Arabidopsis thaliana protein match is: Sodium Bile acid symporter family (TAIR:AT2G26900.1); Has 4745 Blast hits to 4739 proteins in 1061 species: Archae - 72; Bacteria - 2461; Metazoa - 464; Fungi - 2; Plants - 257; Viruses - 0; Other Eukaryotes - 1489 (source: NCBI BLink). & (gnl|cdd|37929 : 207.0) no description available & (gnl|cdd|30734 : 201.0) no description available & (reliability: 834.0) & (original description: Putative BASS1, Description = Probable sodium/metabolite cotransporter BASS1, chloroplastic, PFAM = PF01758)' T '34.14' 'transport.unspecified cations' 'niben101scf00270_1317486-1321962' '(at1g16390 : 535.0) organic cation/carnitine transporter 3 (3-Oct); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: organic cation/carnitine transporter 2 (TAIR:AT1G79360.1); Has 22920 Blast hits to 22877 proteins in 2010 species: Archae - 415; Bacteria - 11427; Metazoa - 4445; Fungi - 4126; Plants - 1629; Viruses - 0; Other Eukaryotes - 878 (source: NCBI BLink). & (gnl|cdd|35476 : 220.0) no description available & (gnl|cdd|84502 : 101.0) no description available & (reliability: 1070.0) & (original description: Putative 37895, Description = Organic cation/carnitine transporter 3, PFAM = PF00083)' T '34.14' 'transport.unspecified cations' 'niben101scf00271_790697-794637' '(at1g54115 : 743.0) Involved in cation (Na and K) homeostasis.; cation calcium exchanger 4 (CCX4); FUNCTIONS IN: cation:cation antiporter activity; INVOLVED IN: cation transport, cellular cation homeostasis; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837); BEST Arabidopsis thaliana protein match is: cation exchanger 9 (TAIR:AT3G14070.1); Has 4016 Blast hits to 3229 proteins in 801 species: Archae - 54; Bacteria - 848; Metazoa - 1841; Fungi - 309; Plants - 226; Viruses - 0; Other Eukaryotes - 738 (source: NCBI BLink). & (gnl|cdd|37610 : 458.0) no description available & (reliability: 1486.0) & (original description: Putative CCX4, Description = Cation/calcium exchanger 4, PFAM = PF01699;PF01699)' T '34.14' 'transport.unspecified cations' 'niben101scf00347_53276-58008' '(at4g28390 : 526.0) Encodes a mitochondrial ADP/ATP carrier protein. Shown in heterologous systems to be located in the plasma membrane. Has comparable affinity for ADP and ATP (in E.coli).; ADP/ATP carrier 3 (AAC3); FUNCTIONS IN: binding, ATP:ADP antiporter activity; INVOLVED IN: transport, mitochondrial transport, purine nucleotide transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 2 (TAIR:AT5G13490.2); Has 20286 Blast hits to 12392 proteins in 480 species: Archae - 0; Bacteria - 0; Metazoa - 9416; Fungi - 5054; Plants - 3787; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (p04709|adt1_maize : 509.0) ADP,ATP carrier protein 1, mitochondrial precursor (ADP/ATP translocase 1) (Adenine nucleotide translocator 1) (ANT 1) - Zea mays (Maize) & (gnl|cdd|35968 : 435.0) no description available & (gnl|cdd|84566 : 92.3) no description available & (reliability: 996.0) & (original description: Putative AAC3, Description = ADP,ATP carrier protein 3, mitochondrial, PFAM = PF00153;PF00153;PF00153)' T '34.14' 'transport.unspecified cations' 'niben101scf00407_180781-186969' '(at1g02630 : 436.0) Nucleoside transporter family protein; FUNCTIONS IN: nucleoside transmembrane transporter activity; INVOLVED IN: transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Delayed-early response protein/equilibrative nucleoside transporter (InterPro:IPR002259); BEST Arabidopsis thaliana protein match is: equilibrative nucleotide transporter 1 (TAIR:AT1G70330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36692 : 269.0) no description available & (gnl|cdd|85636 : 151.0) no description available & (reliability: 872.0) & (original description: Putative ENT1, Description = Equilibrative nucleoside transporter, PFAM = PF01733;PF01733)' T '34.14' 'transport.unspecified cations' 'niben101scf00478_11110-14692' '(at5g26220 : 342.0) ChaC-like family protein; CONTAINS InterPro DOMAIN/s: ChaC-like protein (InterPro:IPR006840); BEST Arabidopsis thaliana protein match is: ChaC-like family protein (TAIR:AT4G31290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38392 : 255.0) no description available & (gnl|cdd|68329 : 224.0) no description available & (reliability: 684.0) & (original description: Putative GGCT2, Description = Gamma-glutamylcyclotransferase 2-1, PFAM = PF04752)' T '34.14' 'transport.unspecified cations' 'niben101scf00486_325607-338363' '(at5g64560 : 476.0) Transmembrane magnesium transporter. One of 9 family members.; magnesium transporter 9 (MGT9); FUNCTIONS IN: magnesium ion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: transmembrane transport, metal ion transport; LOCATED IN: membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); BEST Arabidopsis thaliana protein match is: magnesium transporter 7 (TAIR:AT5G09690.2); Has 775 Blast hits to 761 proteins in 168 species: Archae - 2; Bacteria - 17; Metazoa - 61; Fungi - 196; Plants - 398; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (gnl|cdd|37873 : 442.0) no description available & (gnl|cdd|85522 : 238.0) no description available & (reliability: 952.0) & (original description: Putative MGT1, Description = Magnesium transporter MRS2/LPE10, PFAM = PF01544)' T '34.14' 'transport.unspecified cations' 'niben101scf00505_29166-36278' '(at3g05030 : 716.0) member of Sodium proton exchanger family; sodium hydrogen exchanger 2 (NHX2); FUNCTIONS IN: sodium:hydrogen antiporter activity, sodium ion transmembrane transporter activity; INVOLVED IN: cation transport, sodium ion transport, regulation of pH, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger, conserved region (InterPro:IPR018422), Cation/H+ exchanger (InterPro:IPR006153), Na+/H+ exchanger, isoforms 1-4, conserved region (InterPro:IPR018407); BEST Arabidopsis thaliana protein match is: Na+/H+ exchanger 1 (TAIR:AT5G27150.1); Has 5239 Blast hits to 5232 proteins in 1555 species: Archae - 25; Bacteria - 3481; Metazoa - 811; Fungi - 131; Plants - 434; Viruses - 0; Other Eukaryotes - 357 (source: NCBI BLink). & (gnl|cdd|37176 : 488.0) no description available & (gnl|cdd|30375 : 139.0) no description available & (reliability: 1432.0) & (original description: Putative nhx1, Description = Sodium/hydrogen exchanger, PFAM = PF00999)' T '34.14' 'transport.unspecified cations' 'niben101scf00761_489307-495062' '(p27081|adt2_soltu : 652.0) ADP,ATP carrier protein, mitochondrial precursor (ADP/ATP translocase) (Adenine nucleotide translocator) (ANT) (Fragment) - Solanum tuberosum (Potato) & (at3g08580 : 565.0) mitochondrial ADP/ATP carrier; ADP/ATP carrier 1 (AAC1); FUNCTIONS IN: binding, copper ion binding, ATP:ADP antiporter activity; INVOLVED IN: transport, purine nucleotide transport; LOCATED IN: in 10 components; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 2 (TAIR:AT5G13490.2); Has 19858 Blast hits to 12534 proteins in 484 species: Archae - 0; Bacteria - 0; Metazoa - 8967; Fungi - 5060; Plants - 3882; Viruses - 0; Other Eukaryotes - 1949 (source: NCBI BLink). & (gnl|cdd|35968 : 438.0) no description available & (gnl|cdd|84566 : 91.1) no description available & (reliability: 1130.0) & (original description: Putative ANT, Description = ADP,ATP carrier protein, mitochondrial, PFAM = PF00153;PF00153;PF00153)' T '34.14' 'transport.unspecified cations' 'niben101scf00813_229631-233414' '(p25083|adt1_soltu : 665.0) ADP,ATP carrier protein, mitochondrial precursor (ADP/ATP translocase) (Adenine nucleotide translocator) (ANT) - Solanum tuberosum (Potato) & (at5g13490 : 569.0) Encodes mitochondrial ADP/ATP carrier; ADP/ATP carrier 2 (AAC2); FUNCTIONS IN: protein binding, binding, copper ion binding, ATP:ADP antiporter activity; INVOLVED IN: transport, purine nucleotide transport; LOCATED IN: mitochondrial envelope, mitochondrion, mitochondrial inner membrane, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 1 (TAIR:AT3G08580.2); Has 20201 Blast hits to 12470 proteins in 482 species: Archae - 0; Bacteria - 0; Metazoa - 9190; Fungi - 5149; Plants - 3866; Viruses - 0; Other Eukaryotes - 1996 (source: NCBI BLink). & (gnl|cdd|35968 : 437.0) no description available & (gnl|cdd|84566 : 91.5) no description available & (reliability: 1138.0) & (original description: Putative ANT, Description = ADP,ATP carrier protein, mitochondrial, PFAM = PF00153;PF00153;PF00153)' T '34.14' 'transport.unspecified cations' 'niben101scf00858_411470-418040' '(at3g20660 : 626.0) organic cation/carnitine transporter4 (4-Oct); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: chloroplast thylakoid membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: pseudogene (TAIR:AT1G73220.1); Has 27723 Blast hits to 27519 proteins in 2032 species: Archae - 544; Bacteria - 15020; Metazoa - 4940; Fungi - 4480; Plants - 1745; Viruses - 0; Other Eukaryotes - 994 (source: NCBI BLink). & (gnl|cdd|35476 : 269.0) no description available & (gnl|cdd|84502 : 121.0) no description available & (reliability: 1252.0) & (original description: Putative 38261, Description = Organic cation/carnitine transporter 4, PFAM = PF00083)' T '34.14' 'transport.unspecified cations' 'niben101scf00955_377066-420806' '(at2g01980 : 1263.0) Encodes a plasma membrane-localized Na+/H+ antiporter SOS1. Functions in the extrusion of toxic Na+ from cells and is essential for plant salt tolerance. Has 12 predicted transmembrane domains in the N-terminal region and a long cytoplasmic tail of approx. 700 aa at the C-terminal side. SOS1 interacts through its predicted cytoplasmic tail with RCD1, a regulator of oxidative-stress responses, suggesting that SOS1 might function in oxidative-stress tolerance.; SALT OVERLY SENSITIVE 1 (SOS1); FUNCTIONS IN: sodium:hydrogen antiporter activity; INVOLVED IN: in 7 processes; LOCATED IN: plasma membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cation/H+ exchanger, conserved region (InterPro:IPR018422), Cation/H+ exchanger (InterPro:IPR006153), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Na+/H+ exchanger, isoforms 7/8, conserved region (InterPro:IPR018418); BEST Arabidopsis thaliana protein match is: Na+/H+ exchanger 8 (TAIR:AT1G14660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37176 : 321.0) no description available & (gnl|cdd|30375 : 207.0) no description available & (reliability: 2526.0) & (original description: Putative sos1, Description = Plasmalemma Na+/H+ antiporter, PFAM = PF00999)' T '34.14' 'transport.unspecified cations' 'niben101scf01060_106524-110464' '(at1g54115 : 720.0) Involved in cation (Na and K) homeostasis.; cation calcium exchanger 4 (CCX4); FUNCTIONS IN: cation:cation antiporter activity; INVOLVED IN: cation transport, cellular cation homeostasis; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837); BEST Arabidopsis thaliana protein match is: cation exchanger 9 (TAIR:AT3G14070.1); Has 4016 Blast hits to 3229 proteins in 801 species: Archae - 54; Bacteria - 848; Metazoa - 1841; Fungi - 309; Plants - 226; Viruses - 0; Other Eukaryotes - 738 (source: NCBI BLink). & (gnl|cdd|37610 : 444.0) no description available & (reliability: 1440.0) & (original description: Putative CCX4, Description = Cation/calcium exchanger 4, PFAM = PF01699;PF01699)' T '34.14' 'transport.unspecified cations' 'niben101scf01166_171251-179304' '(at1g44790 : 280.0) ChaC-like family protein; CONTAINS InterPro DOMAIN/s: ChaC-like protein (InterPro:IPR006840); BEST Arabidopsis thaliana protein match is: ChaC-like family protein (TAIR:AT4G31290.1); Has 1621 Blast hits to 1621 proteins in 610 species: Archae - 0; Bacteria - 916; Metazoa - 235; Fungi - 131; Plants - 128; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|38392 : 235.0) no description available & (gnl|cdd|68329 : 215.0) no description available & (reliability: 560.0) & (original description: Putative GGCT2, Description = Gamma-glutamylcyclotransferase 2-3, PFAM = PF04752)' T '34.14' 'transport.unspecified cations' 'niben101scf01188_797994-801865' '(at1g16390 : 536.0) organic cation/carnitine transporter 3 (3-Oct); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: organic cation/carnitine transporter 2 (TAIR:AT1G79360.1); Has 22920 Blast hits to 22877 proteins in 2010 species: Archae - 415; Bacteria - 11427; Metazoa - 4445; Fungi - 4126; Plants - 1629; Viruses - 0; Other Eukaryotes - 878 (source: NCBI BLink). & (gnl|cdd|35476 : 208.0) no description available & (gnl|cdd|84502 : 106.0) no description available & (reliability: 1072.0) & (original description: Putative 37895, Description = Organic cation/carnitine transporter 3, PFAM = PF00083)' T '34.14' 'transport.unspecified cations' 'niben101scf01561_200583-206007' '(at4g05120 : 503.0) Encodes an equilibrative nucleoside transporter AtENT3. Mutations of this locus allow mutants to grow on uridine analogue fluorouridine.; FUDR RESISTANT 1 (FUR1); FUNCTIONS IN: nucleoside transmembrane transporter activity; INVOLVED IN: nucleoside transport, pyrimidine nucleoside transport; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Delayed-early response protein/equilibrative nucleoside transporter (InterPro:IPR002259), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: equilibrative nucleoside transporter 6 (TAIR:AT4G05110.1); Has 945 Blast hits to 913 proteins in 187 species: Archae - 0; Bacteria - 2; Metazoa - 416; Fungi - 101; Plants - 211; Viruses - 0; Other Eukaryotes - 215 (source: NCBI BLink). & (gnl|cdd|36692 : 322.0) no description available & (gnl|cdd|85636 : 94.2) no description available & (reliability: 1006.0) & (original description: Putative ENT3, Description = Equilibrative nucleotide transporter 3, PFAM = PF01733)' T '34.14' 'transport.unspecified cations' 'niben101scf01729_39830-46983' '(at4g22840 : 436.0) Sodium Bile acid symporter family; FUNCTIONS IN: transporter activity, bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657); BEST Arabidopsis thaliana protein match is: bile acid transporter 5 (TAIR:AT4G12030.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37929 : 213.0) no description available & (gnl|cdd|30734 : 155.0) no description available & (reliability: 872.0) & (original description: Putative BASS5, Description = Probable sodium/metabolite cotransporter BASS5, chloroplastic, PFAM = PF01758)' T '34.14' 'transport.unspecified cations' 'niben101scf01752_998493-1006753' '(at5g55470 : 675.0) member of Sodium proton exchanger family; Na+/H+ (sodium hydrogen) exchanger 3 (NHX3); CONTAINS InterPro DOMAIN/s: Na+/H+ exchanger, subfamily (InterPro:IPR004709), Cation/H+ exchanger, conserved region (InterPro:IPR018422), Cation/H+ exchanger (InterPro:IPR006153), Na+/H+ exchanger, isoforms 1-4, conserved region (InterPro:IPR018407); BEST Arabidopsis thaliana protein match is: sodium hydrogen exchanger 2 (TAIR:AT3G05030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37176 : 465.0) no description available & (gnl|cdd|30375 : 140.0) no description available & (reliability: 1350.0) & (original description: Putative NHX4, Description = Sodium/hydrogen exchanger 4, PFAM = PF00999)' T '34.14' 'transport.unspecified cations' 'niben101scf01970_730262-736345' '(at3g58970 : 479.0) Transmembrane magnesium transporter. One of nine family members.; magnesium transporter 6 (MGT6); FUNCTIONS IN: magnesium ion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: transmembrane transport, metal ion transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); BEST Arabidopsis thaliana protein match is: magnesium transport 5 (TAIR:AT4G28580.1); Has 803 Blast hits to 784 proteins in 174 species: Archae - 2; Bacteria - 26; Metazoa - 66; Fungi - 194; Plants - 407; Viruses - 2; Other Eukaryotes - 106 (source: NCBI BLink). & (gnl|cdd|37873 : 407.0) no description available & (gnl|cdd|85522 : 195.0) no description available & (reliability: 958.0) & (original description: Putative MGT1, Description = Magnesium transporter CorA-like family protein, PFAM = PF01544)' T '34.14' 'transport.unspecified cations' 'niben101scf01985_116333-122787' '(at3g05030 : 566.0) member of Sodium proton exchanger family; sodium hydrogen exchanger 2 (NHX2); FUNCTIONS IN: sodium:hydrogen antiporter activity, sodium ion transmembrane transporter activity; INVOLVED IN: cation transport, sodium ion transport, regulation of pH, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger, conserved region (InterPro:IPR018422), Cation/H+ exchanger (InterPro:IPR006153), Na+/H+ exchanger, isoforms 1-4, conserved region (InterPro:IPR018407); BEST Arabidopsis thaliana protein match is: Na+/H+ exchanger 1 (TAIR:AT5G27150.1); Has 5239 Blast hits to 5232 proteins in 1555 species: Archae - 25; Bacteria - 3481; Metazoa - 811; Fungi - 131; Plants - 434; Viruses - 0; Other Eukaryotes - 357 (source: NCBI BLink). & (gnl|cdd|37176 : 447.0) no description available & (gnl|cdd|30375 : 144.0) no description available & (reliability: 1132.0) & (original description: Putative NHX1, Description = Sodium/hydrogen exchanger, PFAM = PF00999)' T '34.14' 'transport.unspecified cations' 'niben101scf01993_760022-766608' '(at1g78560 : 228.0) Sodium Bile acid symporter family; FUNCTIONS IN: transporter activity, bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657); BEST Arabidopsis thaliana protein match is: Sodium Bile acid symporter family (TAIR:AT2G26900.1); Has 4745 Blast hits to 4739 proteins in 1061 species: Archae - 72; Bacteria - 2461; Metazoa - 464; Fungi - 2; Plants - 257; Viruses - 0; Other Eukaryotes - 1489 (source: NCBI BLink). & (gnl|cdd|30734 : 191.0) no description available & (gnl|cdd|37929 : 148.0) no description available & (reliability: 456.0) & (original description: Putative BASS2, Description = Probable sodium/metabolite cotransporter BASS2, chloroplastic, PFAM = PF01758)' T '34.14' 'transport.unspecified cations' 'niben101scf01999_603481-609156' '(at2g04305 : 586.0) Magnesium transporter CorA-like family protein; FUNCTIONS IN: metal ion transmembrane transporter activity; INVOLVED IN: metal ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30943 : 83.5) no description available & (reliability: 1172.0) & (original description: Putative At2g04305, Description = At2g04305/T23O15.7, PFAM = PF01544)' T '34.14' 'transport.unspecified cations' 'niben101scf02002_138188-140685' '(at5g47560 : 202.0) Encodes a tonoplast malate/fumarate transporter.; tonoplast dicarboxylate transporter (TDT); CONTAINS InterPro DOMAIN/s: Sodium/sulphate symporter (InterPro:IPR001898); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36495 : 110.0) no description available & (reliability: 404.0) & (original description: Putative SDAT, Description = Tonoplast dicarboxylate transporter, PFAM = PF00939)' T '34.14' 'transport.unspecified cations' 'niben101scf02056_89160-98357' '(at3g25410 : 469.0) Sodium Bile acid symporter family; FUNCTIONS IN: transporter activity, bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657); BEST Arabidopsis thaliana protein match is: bile acid transporter 5 (TAIR:AT4G12030.2); Has 4132 Blast hits to 4124 proteins in 1073 species: Archae - 57; Bacteria - 2245; Metazoa - 386; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 1216 (source: NCBI BLink). & (gnl|cdd|37929 : 180.0) no description available & (gnl|cdd|30734 : 157.0) no description available & (reliability: 938.0) & (original description: Putative BASS3, Description = Probable sodium/metabolite cotransporter BASS3, chloroplastic, PFAM = PF01758)' T '34.14' 'transport.unspecified cations' 'niben101scf02068_431133-455421' '(at2g26900 : 503.0) Sodium Bile acid symporter family; FUNCTIONS IN: transporter activity, bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport, organic anion transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657), Bile acid transporter (InterPro:IPR004710); BEST Arabidopsis thaliana protein match is: Sodium Bile acid symporter family (TAIR:AT1G78560.1); Has 5023 Blast hits to 5015 proteins in 1109 species: Archae - 92; Bacteria - 2706; Metazoa - 448; Fungi - 4; Plants - 268; Viruses - 0; Other Eukaryotes - 1505 (source: NCBI BLink). & (gnl|cdd|37929 : 243.0) no description available & (gnl|cdd|30734 : 211.0) no description available & (reliability: 1006.0) & (original description: Putative BASS2, Description = Sodium/pyruvate cotransporter BASS2, chloroplastic, PFAM = PF01758)' T '34.14' 'transport.unspecified cations' 'niben101scf02321_173110-185202' '(at2g01980 : 333.0) Encodes a plasma membrane-localized Na+/H+ antiporter SOS1. Functions in the extrusion of toxic Na+ from cells and is essential for plant salt tolerance. Has 12 predicted transmembrane domains in the N-terminal region and a long cytoplasmic tail of approx. 700 aa at the C-terminal side. SOS1 interacts through its predicted cytoplasmic tail with RCD1, a regulator of oxidative-stress responses, suggesting that SOS1 might function in oxidative-stress tolerance.; SALT OVERLY SENSITIVE 1 (SOS1); FUNCTIONS IN: sodium:hydrogen antiporter activity; INVOLVED IN: in 7 processes; LOCATED IN: plasma membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cation/H+ exchanger, conserved region (InterPro:IPR018422), Cation/H+ exchanger (InterPro:IPR006153), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Na+/H+ exchanger, isoforms 7/8, conserved region (InterPro:IPR018418); BEST Arabidopsis thaliana protein match is: Na+/H+ exchanger 8 (TAIR:AT1G14660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37176 : 215.0) no description available & (gnl|cdd|30375 : 99.0) no description available & (reliability: 666.0) & (original description: Putative nhaK, Description = Salt overly sensitive 1, PFAM = PF00999)' T '34.14' 'transport.unspecified cations' 'niben101scf02621_51350-60052' '(at3g19640 : 491.0) Transmembrane magnesium transporter. One of nine family members.; magnesium transporter 4 (MGT4); FUNCTIONS IN: magnesium ion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: transmembrane transport, metal ion transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); BEST Arabidopsis thaliana protein match is: magnesium transporter 2 (TAIR:AT1G16010.3); Has 942 Blast hits to 823 proteins in 177 species: Archae - 2; Bacteria - 38; Metazoa - 107; Fungi - 287; Plants - 404; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|37873 : 399.0) no description available & (gnl|cdd|85522 : 139.0) no description available & (reliability: 982.0) & (original description: Putative MGT1, Description = Magnesium transporter MRS2/LPE10, PFAM = )' T '34.14' 'transport.unspecified cations' 'niben101scf02763_84264-88186' '(at3g14070 : 568.0) Involved in cation (K, Na and Mn) homeostasis and transport; cation exchanger 9 (CAX9); CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837); BEST Arabidopsis thaliana protein match is: cation calcium exchanger 4 (TAIR:AT1G54115.1); Has 3863 Blast hits to 3216 proteins in 856 species: Archae - 67; Bacteria - 789; Metazoa - 1939; Fungi - 299; Plants - 225; Viruses - 0; Other Eukaryotes - 544 (source: NCBI BLink). & (gnl|cdd|37610 : 432.0) no description available & (reliability: 1136.0) & (original description: Putative CCX4, Description = Cation/calcium exchanger 4, PFAM = PF01699;PF01699)' T '34.14' 'transport.unspecified cations' 'niben101scf02838_3162-7405' '(at1g02630 : 439.0) Nucleoside transporter family protein; FUNCTIONS IN: nucleoside transmembrane transporter activity; INVOLVED IN: transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Delayed-early response protein/equilibrative nucleoside transporter (InterPro:IPR002259); BEST Arabidopsis thaliana protein match is: equilibrative nucleotide transporter 1 (TAIR:AT1G70330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36692 : 292.0) no description available & (gnl|cdd|85636 : 154.0) no description available & (reliability: 878.0) & (original description: Putative ETN8, Description = Equilibrative nucleotide transporter 8, PFAM = PF01733;PF01733)' T '34.14' 'transport.unspecified cations' 'niben101scf03308_165623-173359' '(at5g47560 : 641.0) Encodes a tonoplast malate/fumarate transporter.; tonoplast dicarboxylate transporter (TDT); CONTAINS InterPro DOMAIN/s: Sodium/sulphate symporter (InterPro:IPR001898); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36495 : 397.0) no description available & (gnl|cdd|73247 : 201.0) no description available & (reliability: 1282.0) & (original description: Putative TDT, Description = Tonoplast dicarboxylate transporter, PFAM = PF00939)' T '34.14' 'transport.unspecified cations' 'niben101scf03574_159187-167472' '(at2g04305 : 624.0) Magnesium transporter CorA-like family protein; FUNCTIONS IN: metal ion transmembrane transporter activity; INVOLVED IN: metal ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30943 : 89.3) no description available & (reliability: 1248.0) & (original description: Putative At2g04305, Description = At2g04305/T23O15.7, PFAM = PF01544)' T '34.14' 'transport.unspecified cations' 'niben101scf03855_155086-161946' '(at3g05030 : 726.0) member of Sodium proton exchanger family; sodium hydrogen exchanger 2 (NHX2); FUNCTIONS IN: sodium:hydrogen antiporter activity, sodium ion transmembrane transporter activity; INVOLVED IN: cation transport, sodium ion transport, regulation of pH, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger, conserved region (InterPro:IPR018422), Cation/H+ exchanger (InterPro:IPR006153), Na+/H+ exchanger, isoforms 1-4, conserved region (InterPro:IPR018407); BEST Arabidopsis thaliana protein match is: Na+/H+ exchanger 1 (TAIR:AT5G27150.1); Has 5239 Blast hits to 5232 proteins in 1555 species: Archae - 25; Bacteria - 3481; Metazoa - 811; Fungi - 131; Plants - 434; Viruses - 0; Other Eukaryotes - 357 (source: NCBI BLink). & (gnl|cdd|37176 : 506.0) no description available & (gnl|cdd|30375 : 139.0) no description available & (reliability: 1452.0) & (original description: Putative nhx1, Description = Sodium/hydrogen exchanger, PFAM = PF00999)' T '34.14' 'transport.unspecified cations' 'niben101scf04220_581099-587126' '(at1g16010 : 618.0) Transmembrane magnesium transporter. One of nine family members.; magnesium transporter 2 (MGT2); FUNCTIONS IN: magnesium ion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: transmembrane transport, metal ion transport; LOCATED IN: membrane; EXPRESSED IN: 32 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); BEST Arabidopsis thaliana protein match is: magnesium transporter 1 (TAIR:AT1G80900.1). & (gnl|cdd|37873 : 467.0) no description available & (gnl|cdd|85522 : 152.0) no description available & (reliability: 1236.0) & (original description: Putative MGT1, Description = Magnesium transporter MRS2/LPE10, PFAM = PF01544)' T '34.14' 'transport.unspecified cations' 'niben101scf04528_844169-858105' '(at1g78560 : 471.0) Sodium Bile acid symporter family; FUNCTIONS IN: transporter activity, bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657); BEST Arabidopsis thaliana protein match is: Sodium Bile acid symporter family (TAIR:AT2G26900.1); Has 4745 Blast hits to 4739 proteins in 1061 species: Archae - 72; Bacteria - 2461; Metazoa - 464; Fungi - 2; Plants - 257; Viruses - 0; Other Eukaryotes - 1489 (source: NCBI BLink). & (gnl|cdd|37929 : 234.0) no description available & (gnl|cdd|30734 : 224.0) no description available & (reliability: 942.0) & (original description: Putative BASS1, Description = Probable sodium/metabolite cotransporter BASS1, chloroplastic, PFAM = PF01758)' T '34.14' 'transport.unspecified cations' 'niben101scf04528_852040-857840' '(at1g78560 : 327.0) Sodium Bile acid symporter family; FUNCTIONS IN: transporter activity, bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657); BEST Arabidopsis thaliana protein match is: Sodium Bile acid symporter family (TAIR:AT2G26900.1); Has 4745 Blast hits to 4739 proteins in 1061 species: Archae - 72; Bacteria - 2461; Metazoa - 464; Fungi - 2; Plants - 257; Viruses - 0; Other Eukaryotes - 1489 (source: NCBI BLink). & (gnl|cdd|37929 : 160.0) no description available & (gnl|cdd|30734 : 151.0) no description available & (reliability: 654.0) & (original description: Putative tll1126, Description = Tll1126 protein, PFAM = PF01758)' T '34.14' 'transport.unspecified cations' 'niben101scf04785_13072-21619' '(at3g05030 : 709.0) member of Sodium proton exchanger family; sodium hydrogen exchanger 2 (NHX2); FUNCTIONS IN: sodium:hydrogen antiporter activity, sodium ion transmembrane transporter activity; INVOLVED IN: cation transport, sodium ion transport, regulation of pH, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger, conserved region (InterPro:IPR018422), Cation/H+ exchanger (InterPro:IPR006153), Na+/H+ exchanger, isoforms 1-4, conserved region (InterPro:IPR018407); BEST Arabidopsis thaliana protein match is: Na+/H+ exchanger 1 (TAIR:AT5G27150.1); Has 5239 Blast hits to 5232 proteins in 1555 species: Archae - 25; Bacteria - 3481; Metazoa - 811; Fungi - 131; Plants - 434; Viruses - 0; Other Eukaryotes - 357 (source: NCBI BLink). & (gnl|cdd|37176 : 514.0) no description available & (gnl|cdd|30375 : 133.0) no description available & (reliability: 1418.0) & (original description: Putative nhx4, Description = Sodium/hydrogen exchanger, PFAM = PF00999)' T '34.14' 'transport.unspecified cations' 'niben101scf04860_57916-76922' '(at2g26900 : 412.0) Sodium Bile acid symporter family; FUNCTIONS IN: transporter activity, bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport, organic anion transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657), Bile acid transporter (InterPro:IPR004710); BEST Arabidopsis thaliana protein match is: Sodium Bile acid symporter family (TAIR:AT1G78560.1); Has 5023 Blast hits to 5015 proteins in 1109 species: Archae - 92; Bacteria - 2706; Metazoa - 448; Fungi - 4; Plants - 268; Viruses - 0; Other Eukaryotes - 1505 (source: NCBI BLink). & (gnl|cdd|37929 : 211.0) no description available & (gnl|cdd|30734 : 180.0) no description available & (reliability: 824.0) & (original description: Putative BASS2, Description = Sodium/pyruvate cotransporter BASS2, chloroplastic, PFAM = PF01758)' T '34.14' 'transport.unspecified cations' 'niben101scf04939_110534-115302' '(at4g05120 : 551.0) Encodes an equilibrative nucleoside transporter AtENT3. Mutations of this locus allow mutants to grow on uridine analogue fluorouridine.; FUDR RESISTANT 1 (FUR1); FUNCTIONS IN: nucleoside transmembrane transporter activity; INVOLVED IN: nucleoside transport, pyrimidine nucleoside transport; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Delayed-early response protein/equilibrative nucleoside transporter (InterPro:IPR002259), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: equilibrative nucleoside transporter 6 (TAIR:AT4G05110.1); Has 945 Blast hits to 913 proteins in 187 species: Archae - 0; Bacteria - 2; Metazoa - 416; Fungi - 101; Plants - 211; Viruses - 0; Other Eukaryotes - 215 (source: NCBI BLink). & (gnl|cdd|36692 : 345.0) no description available & (gnl|cdd|85636 : 103.0) no description available & (reliability: 1102.0) & (original description: Putative ent3, Description = Equilibrative nucleoside transporter 3, PFAM = PF01733)' T '34.14' 'transport.unspecified cations' 'niben101scf05004_432709-436171' '(at5g26220 : 342.0) ChaC-like family protein; CONTAINS InterPro DOMAIN/s: ChaC-like protein (InterPro:IPR006840); BEST Arabidopsis thaliana protein match is: ChaC-like family protein (TAIR:AT4G31290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38392 : 259.0) no description available & (gnl|cdd|68329 : 220.0) no description available & (reliability: 684.0) & (original description: Putative GGCT2, Description = Gamma-glutamylcyclotransferase 2-1, PFAM = PF04752)' T '34.14' 'transport.unspecified cations' 'niben101scf05330_246167-252611' '(at2g03620 : 437.0) Transmembrane magnesium transporter. One of nine family members.; magnesium transporter 3 (MGT3); BEST Arabidopsis thaliana protein match is: magnesium transporter 2 (TAIR:AT1G16010.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37873 : 372.0) no description available & (gnl|cdd|85522 : 180.0) no description available & (reliability: 874.0) & (original description: Putative MGT1, Description = Magnesium transporter CorA-like family protein, PFAM = )' T '34.14' 'transport.unspecified cations' 'niben101scf05548_228616-244781' '(at1g10830 : 485.0) Encodes a variant protein of the 15-cis-zeta-carotene isomase (Z-ISO) locus lacking Z-ISO activity.; 15-cis-zeta-carotene isomerase (Z-ISO); FUNCTIONS IN: 9,15,9'-tri-cis-zeta-carotene isomerase activity; INVOLVED IN: carotene biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NnrU (InterPro:IPR009915); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|33851 : 166.0) no description available & (reliability: 970.0) & (original description: Putative nnrU, Description = 15-cis-zeta-carotene isomerase, PFAM = PF07298)' T '34.14' 'transport.unspecified cations' 'niben101scf05801_35156-40690' '(at5g64560 : 426.0) Transmembrane magnesium transporter. One of 9 family members.; magnesium transporter 9 (MGT9); FUNCTIONS IN: magnesium ion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: transmembrane transport, metal ion transport; LOCATED IN: membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); BEST Arabidopsis thaliana protein match is: magnesium transporter 7 (TAIR:AT5G09690.2); Has 775 Blast hits to 761 proteins in 168 species: Archae - 2; Bacteria - 17; Metazoa - 61; Fungi - 196; Plants - 398; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (gnl|cdd|37873 : 425.0) no description available & (gnl|cdd|85522 : 228.0) no description available & (reliability: 852.0) & (original description: Putative MGT1, Description = Magnesium transporter MRS2/LPE10, PFAM = PF01544)' T '34.14' 'transport.unspecified cations' 'niben101scf06295_363074-375229' '(at5g22830 : 517.0) Transmembrane magnesium transporter. One of nine family members.; magnesium (Mg) transporter 10 (MGT10); FUNCTIONS IN: magnesium ion transmembrane transporter activity; INVOLVED IN: magnesium ion transport; LOCATED IN: chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); BEST Arabidopsis thaliana protein match is: magnesium transporter 7 (TAIR:AT5G09690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37873 : 292.0) no description available & (gnl|cdd|85522 : 156.0) no description available & (reliability: 1034.0) & (original description: Putative mgt1, Description = Putative magnesium transporter, PFAM = )' T '34.14' 'transport.unspecified cations' 'niben101scf07386_65172-79546' '(at1g16390 : 305.0) organic cation/carnitine transporter 3 (3-Oct); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: organic cation/carnitine transporter 2 (TAIR:AT1G79360.1); Has 22920 Blast hits to 22877 proteins in 2010 species: Archae - 415; Bacteria - 11427; Metazoa - 4445; Fungi - 4126; Plants - 1629; Viruses - 0; Other Eukaryotes - 878 (source: NCBI BLink). & (gnl|cdd|35476 : 175.0) no description available & (gnl|cdd|84502 : 103.0) no description available & (reliability: 610.0) & (original description: Putative BnaC08g16940D, Description = BnaC08g16940D protein, PFAM = PF07690)' T '34.14' 'transport.unspecified cations' 'niben101scf07953_96102-103324' '(at4g28390 : 536.0) Encodes a mitochondrial ADP/ATP carrier protein. Shown in heterologous systems to be located in the plasma membrane. Has comparable affinity for ADP and ATP (in E.coli).; ADP/ATP carrier 3 (AAC3); FUNCTIONS IN: binding, ATP:ADP antiporter activity; INVOLVED IN: transport, mitochondrial transport, purine nucleotide transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 2 (TAIR:AT5G13490.2); Has 20286 Blast hits to 12392 proteins in 480 species: Archae - 0; Bacteria - 0; Metazoa - 9416; Fungi - 5054; Plants - 3787; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (p04709|adt1_maize : 510.0) ADP,ATP carrier protein 1, mitochondrial precursor (ADP/ATP translocase 1) (Adenine nucleotide translocator 1) (ANT 1) - Zea mays (Maize) & (gnl|cdd|35968 : 438.0) no description available & (gnl|cdd|84566 : 92.7) no description available & (reliability: 992.0) & (original description: Putative AAC3, Description = ADP,ATP carrier protein 3, mitochondrial, PFAM = PF00153;PF00153;PF00153)' T '34.14' 'transport.unspecified cations' 'niben101scf08334_305335-311820' '(at1g78560 : 230.0) Sodium Bile acid symporter family; FUNCTIONS IN: transporter activity, bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657); BEST Arabidopsis thaliana protein match is: Sodium Bile acid symporter family (TAIR:AT2G26900.1); Has 4745 Blast hits to 4739 proteins in 1061 species: Archae - 72; Bacteria - 2461; Metazoa - 464; Fungi - 2; Plants - 257; Viruses - 0; Other Eukaryotes - 1489 (source: NCBI BLink). & (gnl|cdd|30734 : 195.0) no description available & (gnl|cdd|37929 : 151.0) no description available & (reliability: 460.0) & (original description: Putative Sb08g004520, Description = Putative uncharacterized protein Sb08g004520, PFAM = PF01758)' T '34.14' 'transport.unspecified cations' 'niben101scf08844_64349-68783' '(p25083|adt1_soltu : 577.0) ADP,ATP carrier protein, mitochondrial precursor (ADP/ATP translocase) (Adenine nucleotide translocator) (ANT) - Solanum tuberosum (Potato) & (at5g13490 : 545.0) Encodes mitochondrial ADP/ATP carrier; ADP/ATP carrier 2 (AAC2); FUNCTIONS IN: protein binding, binding, copper ion binding, ATP:ADP antiporter activity; INVOLVED IN: transport, purine nucleotide transport; LOCATED IN: mitochondrial envelope, mitochondrion, mitochondrial inner membrane, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 1 (TAIR:AT3G08580.2); Has 20201 Blast hits to 12470 proteins in 482 species: Archae - 0; Bacteria - 0; Metazoa - 9190; Fungi - 5149; Plants - 3866; Viruses - 0; Other Eukaryotes - 1996 (source: NCBI BLink). & (gnl|cdd|35968 : 435.0) no description available & (gnl|cdd|84566 : 91.9) no description available & (reliability: 1090.0) & (original description: Putative ANT, Description = ADP,ATP carrier protein, mitochondrial, PFAM = PF00153;PF00153;PF00153)' T '34.14' 'transport.unspecified cations' 'niben101scf09787_109658-116537' '(at3g05030 : 729.0) member of Sodium proton exchanger family; sodium hydrogen exchanger 2 (NHX2); FUNCTIONS IN: sodium:hydrogen antiporter activity, sodium ion transmembrane transporter activity; INVOLVED IN: cation transport, sodium ion transport, regulation of pH, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger, conserved region (InterPro:IPR018422), Cation/H+ exchanger (InterPro:IPR006153), Na+/H+ exchanger, isoforms 1-4, conserved region (InterPro:IPR018407); BEST Arabidopsis thaliana protein match is: Na+/H+ exchanger 1 (TAIR:AT5G27150.1); Has 5239 Blast hits to 5232 proteins in 1555 species: Archae - 25; Bacteria - 3481; Metazoa - 811; Fungi - 131; Plants - 434; Viruses - 0; Other Eukaryotes - 357 (source: NCBI BLink). & (gnl|cdd|37176 : 508.0) no description available & (gnl|cdd|30375 : 138.0) no description available & (reliability: 1458.0) & (original description: Putative nhx1, Description = Sodium/hydrogen exchanger, PFAM = PF00999)' T '34.14' 'transport.unspecified cations' 'niben101scf13694_57863-82363' '(at5g23630 : 1865.0) A member of the eukaryotic type V subfamily (P5) of P-type ATPase cation pumps; MIA is most similar to the human P5 ATPase ATY2(44% identity) and to Spf1p from S. cerevisiae (41% identity). Highly abundant in the endoplasmic reticulum and small vesicles of developing pollen grains and tapetum cells. T-DNA insertional mutants of MIA suffer from imbalances in cation homeostasis and exhibit a severe reduction in fertility. Mutant microspores fail to separate from tetrads and pollen grains are fragile with an abnormal morphology and altered cell wall structure. MIA is also named PDR2 and was shown to be required for proper expression of SCARECROW (SCR), a key regulator of root patterning, and for stem-cell maintenance in Pi-deprived roots.; phosphate deficiency response 2 (PDR2); FUNCTIONS IN: cation-transporting ATPase activity; INVOLVED IN: in 6 processes; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, unknown pump specificity (type V) (InterPro:IPR006544), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: calcium ATPase 2 (TAIR:AT4G37640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35430 : 1520.0) no description available & (gnl|cdd|30822 : 373.0) no description available & (q2qmx9|aca1_orysa : 90.5) Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) - Oryza sativa (Rice) & (reliability: 3730.0) & (original description: Putative PDR2, Description = Probable manganese-transporting ATPase PDR2, PFAM = PF00702;PF00122)' T '34.14' 'transport.unspecified cations' 'niben101scf15067_27400-31982' '(at4g05120 : 503.0) Encodes an equilibrative nucleoside transporter AtENT3. Mutations of this locus allow mutants to grow on uridine analogue fluorouridine.; FUDR RESISTANT 1 (FUR1); FUNCTIONS IN: nucleoside transmembrane transporter activity; INVOLVED IN: nucleoside transport, pyrimidine nucleoside transport; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Delayed-early response protein/equilibrative nucleoside transporter (InterPro:IPR002259), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: equilibrative nucleoside transporter 6 (TAIR:AT4G05110.1); Has 945 Blast hits to 913 proteins in 187 species: Archae - 0; Bacteria - 2; Metazoa - 416; Fungi - 101; Plants - 211; Viruses - 0; Other Eukaryotes - 215 (source: NCBI BLink). & (gnl|cdd|36692 : 341.0) no description available & (gnl|cdd|85636 : 100.0) no description available & (reliability: 1006.0) & (original description: Putative ent3, Description = Equilibrative nucleoside transporter 3, PFAM = PF01733)' T '34.14' 'transport.unspecified cations' 'niben101scf15809_47001-52754' '(at4g10310 : 394.0) encodes a sodium transporter (HKT1) expressed in xylem parenchyma cells. Mutants over-accumulate sodium in shoot tissue and have increased sodium in the xylem sap and reduced sodium in phloem sap and roots.; high-affinity K+ transporter 1 (HKT1); CONTAINS InterPro DOMAIN/s: Potassium transport protein, high-affinity (InterPro:IPR004773), Cation transporter (InterPro:IPR003445); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6h501|hkt6_orysa : 392.0) Probable cation transporter HKT6 (OsHKT6) - Oryza sativa (Rice) & (gnl|cdd|36555 : 287.0) no description available & (gnl|cdd|66105 : 127.0) no description available & (reliability: 788.0) & (original description: Putative hkt1, Description = HKT1, PFAM = PF02386;PF02386)' T '34.14' 'transport.unspecified cations' 'niben101scf15809_357137-363328' '(q6h501|hkt6_orysa : 356.0) Probable cation transporter HKT6 (OsHKT6) - Oryza sativa (Rice) & (at4g10310 : 323.0) encodes a sodium transporter (HKT1) expressed in xylem parenchyma cells. Mutants over-accumulate sodium in shoot tissue and have increased sodium in the xylem sap and reduced sodium in phloem sap and roots.; high-affinity K+ transporter 1 (HKT1); CONTAINS InterPro DOMAIN/s: Potassium transport protein, high-affinity (InterPro:IPR004773), Cation transporter (InterPro:IPR003445); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36555 : 275.0) no description available & (gnl|cdd|66105 : 127.0) no description available & (reliability: 646.0) & (original description: Putative hkt1, Description = Sodium transporter HKT1, PFAM = PF02386)' T '34.14' 'transport.unspecified cations' 'niben101scf19216_37470-58811' '(at2g01980 : 813.0) Encodes a plasma membrane-localized Na+/H+ antiporter SOS1. Functions in the extrusion of toxic Na+ from cells and is essential for plant salt tolerance. Has 12 predicted transmembrane domains in the N-terminal region and a long cytoplasmic tail of approx. 700 aa at the C-terminal side. SOS1 interacts through its predicted cytoplasmic tail with RCD1, a regulator of oxidative-stress responses, suggesting that SOS1 might function in oxidative-stress tolerance.; SALT OVERLY SENSITIVE 1 (SOS1); FUNCTIONS IN: sodium:hydrogen antiporter activity; INVOLVED IN: in 7 processes; LOCATED IN: plasma membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cation/H+ exchanger, conserved region (InterPro:IPR018422), Cation/H+ exchanger (InterPro:IPR006153), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Na+/H+ exchanger, isoforms 7/8, conserved region (InterPro:IPR018418); BEST Arabidopsis thaliana protein match is: Na+/H+ exchanger 8 (TAIR:AT1G14660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37176 : 267.0) no description available & (gnl|cdd|30375 : 204.0) no description available & (reliability: 1626.0) & (original description: Putative sos1, Description = Plasmalemma Na+/H+ antiporter, PFAM = PF00999)' T '34.14' 'transport.unspecified cations' 'niben101scf20283_78948-91238' '(at1g78560 : 185.0) Sodium Bile acid symporter family; FUNCTIONS IN: transporter activity, bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657); BEST Arabidopsis thaliana protein match is: Sodium Bile acid symporter family (TAIR:AT2G26900.1); Has 4745 Blast hits to 4739 proteins in 1061 species: Archae - 72; Bacteria - 2461; Metazoa - 464; Fungi - 2; Plants - 257; Viruses - 0; Other Eukaryotes - 1489 (source: NCBI BLink). & (gnl|cdd|30734 : 178.0) no description available & (gnl|cdd|37929 : 137.0) no description available & (reliability: 370.0) & (original description: Putative tll1126, Description = Tll1126 protein, PFAM = PF01758)' T '34.14' 'transport.unspecified cations' 'niben101scf27982_11152-13513' '(at2g03620 : 166.0) Transmembrane magnesium transporter. One of nine family members.; magnesium transporter 3 (MGT3); BEST Arabidopsis thaliana protein match is: magnesium transporter 2 (TAIR:AT1G16010.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37873 : 133.0) no description available & (reliability: 332.0) & (original description: Putative MGT1, Description = Magnesium transporter MRS2/LPE10, PFAM = )' T '34.14' 'transport.unspecified cations' 'niben101scf33179_9400-15598' '(at1g70330 : 499.0) encodes an adenosine transporter that catalyze a proton-dependent adenosine transport.; equilibrative nucleotide transporter 1 (ENT1); FUNCTIONS IN: nucleoside transmembrane transporter activity, against a concentration gradient, nucleoside transmembrane transporter activity; INVOLVED IN: transport; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Delayed-early response protein/equilibrative nucleoside transporter (InterPro:IPR002259); BEST Arabidopsis thaliana protein match is: Nucleoside transporter family protein (TAIR:AT1G02630.1); Has 1134 Blast hits to 1048 proteins in 199 species: Archae - 0; Bacteria - 3; Metazoa - 554; Fungi - 118; Plants - 203; Viruses - 3; Other Eukaryotes - 253 (source: NCBI BLink). & (gnl|cdd|36692 : 298.0) no description available & (gnl|cdd|85636 : 198.0) no description available & (reliability: 998.0) & (original description: Putative ENT1, Description = Equilibrative nucleotide transporter 1, PFAM = PF01733)' T '34.15' 'transport.potassium' 'nbv0.3scaffold875_11880-30639' '(at5g09400 : 1144.0) potassium transporter; K+ uptake permease 7 (KUP7); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: vacuolar membrane, plasma membrane, membrane, plant-type vacuole; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: K+ uptake permease 5 (TAIR:AT4G33530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q69ri8|hak14_orysa : 971.0) Probable potassium transporter 14 (OsHAK14) - Oryza sativa (Rice) & (gnl|cdd|66396 : 826.0) no description available & (reliability: 2288.0) & (original description: Putative POT13, Description = Potassium transporter 13, PFAM = PF02705)' T '34.15' 'transport.potassium' 'nbv0.3scaffold7106_19506-27700' '(at1g60160 : 560.0) Potassium transporter family protein; FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: K+ uptake permease 7 (TAIR:AT5G09400.1); Has 3447 Blast hits to 3411 proteins in 1044 species: Archae - 13; Bacteria - 2434; Metazoa - 1; Fungi - 101; Plants - 776; Viruses - 4; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|66396 : 463.0) no description available & (q69ri8|hak14_orysa : 365.0) Probable potassium transporter 14 (OsHAK14) - Oryza sativa (Rice) & (reliability: 1120.0) & (original description: Putative hak1, Description = Potassium transporter, PFAM = PF02705)' T '34.15' 'transport.potassium' 'nbv0.3scaffold32779_11082-20340' '(at4g32650 : 590.0) Encodes KAT3, a member of the Shaker family of voltage-gated potassium channel subunits. Does not form functional potassium channel on its own. Involved in down-regulating AKT1 and KAT1 channel activity by forming heteromers with AKT1 or KAT1. The Shaker family K+ ion channels include five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inwardly rectifying conductance): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).; ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1 (ATKC1); CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Protein of unknown function DUF3354 (InterPro:IPR021789); BEST Arabidopsis thaliana protein match is: K+ transporter 1 (TAIR:AT2G26650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 503.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (gnl|cdd|35719 : 422.0) no description available & (gnl|cdd|28920 : 81.6) no description available & (reliability: 1180.0) & (original description: Putative kdc1, Description = Potassium channel, PFAM = PF00520;PF00027)' T '34.15' 'transport.potassium' 'nbv0.3scaffold37724_9555-18685' '(at3g02050 : 1133.0) potassium transporter KUP3p (KUP3); K+ uptake transporter 3 (KUP3); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, response to external stimulus; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: Potassium transporter family protein (TAIR:AT4G23640.1); Has 3477 Blast hits to 3392 proteins in 1029 species: Archae - 13; Bacteria - 2401; Metazoa - 1; Fungi - 102; Plants - 838; Viruses - 4; Other Eukaryotes - 118 (source: NCBI BLink). & (q942x8|hak2_orysa : 1063.0) Probable potassium transporter 2 (OsHAK2) - Oryza sativa (Rice) & (gnl|cdd|66396 : 926.0) no description available & (reliability: 2266.0) & (original description: Putative POT4, Description = Potassium transporter 4, PFAM = PF02705)' T '34.15' 'transport.potassium' 'nbv0.3scaffold45836_1-7658' '(at1g04690 : 605.0) potassium channel beta subunit 1 (KAB1); FUNCTIONS IN: oxidoreductase activity, potassium channel activity; INVOLVED IN: oxidation reduction, potassium ion transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Potassium channel, voltage-dependent, beta subunit, KCNAB-related (InterPro:IPR005399); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60690.1); Has 29181 Blast hits to 29146 proteins in 2493 species: Archae - 642; Bacteria - 19972; Metazoa - 899; Fungi - 1968; Plants - 978; Viruses - 0; Other Eukaryotes - 4722 (source: NCBI BLink). & (q40648|kcab_orysa : 587.0) Probable voltage-gated potassium channel subunit beta (K(+) channel subunit beta) - Oryza sativa (Rice) & (gnl|cdd|36788 : 333.0) no description available & (gnl|cdd|31011 : 273.0) no description available & (reliability: 1210.0) & (original description: Putative kb1, Description = Putative beta-subunit of K+ channels, PFAM = PF00248)' T '34.15' 'transport.potassium' 'nbv0.3scaffold115183_1-2516' '(at4g13420 : 448.0) Encodes a protein of the KUP/HAK/KT potassium channel class that is upregulated in the roots by K levels.; high affinity K+ transporter 5 (HAK5); FUNCTIONS IN: potassium ion transmembrane transporter activity, potassium:sodium symporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: Potassium transporter family protein (TAIR:AT1G60160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66396 : 447.0) no description available & (q6vva6|hak1_orysa : 383.0) Potassium transporter 1 (OsHAK1) - Oryza sativa (Rice) & (reliability: 896.0) & (original description: Putative hak1, Description = Potassium transporter, PFAM = PF02705)' T '34.15' 'transport.potassium' 'nbv0.5scaffold383_325928-329358' '(at3g09030 : 484.0) BTB/POZ domain-containing protein; FUNCTIONS IN: voltage-gated potassium channel activity; INVOLVED IN: potassium ion transport; LOCATED IN: voltage-gated potassium channel complex, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ fold (InterPro:IPR011333), Potassium channel, voltage dependent, Kv, tetramerisation (InterPro:IPR003131), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain with WD40/YVTN repeat-like protein (TAIR:AT5G41330.1); Has 1593 Blast hits to 1581 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 1335; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|37925 : 282.0) no description available & (reliability: 968.0) & (original description: Putative At3g09030, Description = BTB/POZ domain-containing protein At3g09030, PFAM = PF02214)' T '34.15' 'transport.potassium' 'nbv0.5scaffold1012_70705-84949' '(at4g00630 : 1186.0) member of Putative potassium transporter family; K+ efflux antiporter 2 (KEA2); FUNCTIONS IN: potassium:hydrogen antiporter activity, potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, cation transport, metabolic process, transmembrane transport; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K+/H+ exchanger (InterPro:IPR004771), Cation/H+ exchanger (InterPro:IPR006153), NAD(P)-binding domain (InterPro:IPR016040), Regulator of K+ conductance, N-terminal (InterPro:IPR003148); BEST Arabidopsis thaliana protein match is: K+ efflux antiporter 1 (TAIR:AT1G01790.1). & (gnl|cdd|81159 : 402.0) no description available & (gnl|cdd|36863 : 216.0) no description available & (reliability: 2372.0) & (original description: Putative KEA2, Description = K(+) efflux antiporter 2, chloroplastic, PFAM = PF02254;PF00999)' T '34.15' 'transport.potassium' 'nbv0.5scaffold1040_366458-386357' '(at2g19600 : 753.0) member of Putative potassium proton antiporter family; K+ efflux antiporter 4 (KEA4); FUNCTIONS IN: potassium:hydrogen antiporter activity, potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, cation transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: K+ efflux antiporter 6 (TAIR:AT5G11800.1); Has 10410 Blast hits to 10396 proteins in 2139 species: Archae - 355; Bacteria - 8476; Metazoa - 71; Fungi - 61; Plants - 415; Viruses - 0; Other Eukaryotes - 1032 (source: NCBI BLink). & (gnl|cdd|85173 : 205.0) no description available & (gnl|cdd|36863 : 165.0) no description available & (reliability: 1506.0) & (original description: Putative KEA4, Description = K(+) efflux antiporter 4, PFAM = PF00999)' T '34.15' 'transport.potassium' 'nbv0.5scaffold1874_146979-155500' '(at4g18160 : 407.0) Encodes AtTPK3 (KCO6), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins.AtTPK3 is targeted to the vacuolar membrane. May form homomeric ion channels in vivo.; Ca2+ activated outward rectifying K+ channel 6 (KCO6); FUNCTIONS IN: outward rectifier potassium channel activity; INVOLVED IN: potassium ion transport; LOCATED IN: plant-type vacuole membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Potassium channel, two pore-domain (InterPro:IPR003280), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Ion transport 2 (InterPro:IPR013099); BEST Arabidopsis thaliana protein match is: Ca2+ activated outward rectifying K+ channel 2 (TAIR:AT5G46370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36632 : 131.0) no description available & (reliability: 814.0) & (original description: Putative TPK4, Description = Two-pore potassium channel 4, PFAM = PF07885;PF07885)' T '34.15' 'transport.potassium' 'nbv0.5scaffold2795_58856-62000' '(q7xlc6|hak11_orysa : 194.0) Probable potassium transporter 11 (OsHAK11) - Oryza sativa (Rice) & (at1g31120 : 189.0) potassium transporter; K+ uptake permease 10 (KUP10); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: K+ uptake permease 11 (TAIR:AT2G35060.1); Has 3472 Blast hits to 3422 proteins in 1051 species: Archae - 13; Bacteria - 2438; Metazoa - 1; Fungi - 105; Plants - 791; Viruses - 4; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|66396 : 127.0) no description available & (reliability: 378.0) & (original description: Putative hak1, Description = Potassium transporter, PFAM = PF02705)' T '34.15' 'transport.potassium' 'nbv0.5scaffold3673_95222-124980' '(at5g55000 : 432.0) FH protein interacting protein FIP2; FIP2; FUNCTIONS IN: voltage-gated potassium channel activity; INVOLVED IN: potassium ion transport; LOCATED IN: voltage-gated potassium channel complex, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentapeptide repeat (InterPro:IPR001646), BTB/POZ fold (InterPro:IPR011333), Potassium channel, voltage dependent, Kv, tetramerisation (InterPro:IPR003131), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G44920.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36878 : 340.0) no description available & (gnl|cdd|31548 : 101.0) no description available & (reliability: 864.0) & (original description: Putative FIP2, Description = FH protein interacting protein FIP2, PFAM = PF02214;PF00805;PF00805)' T '34.15' 'transport.potassium' 'nbv0.5scaffold3724_30672-38866' '(at1g60160 : 557.0) Potassium transporter family protein; FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: K+ uptake permease 7 (TAIR:AT5G09400.1); Has 3447 Blast hits to 3411 proteins in 1044 species: Archae - 13; Bacteria - 2434; Metazoa - 1; Fungi - 101; Plants - 776; Viruses - 4; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|66396 : 460.0) no description available & (q69ri8|hak14_orysa : 365.0) Probable potassium transporter 14 (OsHAK14) - Oryza sativa (Rice) & (reliability: 1114.0) & (original description: Putative hak1, Description = Potassium transporter, PFAM = PF02705)' T '34.15' 'transport.potassium' 'nbv0.5scaffold4645_26063-78719' '(at5g14880 : 1167.0) Potassium transporter family protein; FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: K+ uptake permease 6 (TAIR:AT1G70300.1); Has 3431 Blast hits to 3392 proteins in 1031 species: Archae - 13; Bacteria - 2398; Metazoa - 1; Fungi - 104; Plants - 790; Viruses - 4; Other Eukaryotes - 121 (source: NCBI BLink). & (gnl|cdd|66396 : 998.0) no description available & (q7xiv8|hak9_orysa : 992.0) Probable potassium transporter 9 (OsHAK9) - Oryza sativa (Rice) & (reliability: 2334.0) & (original description: Putative POT8, Description = Potassium transporter 8, PFAM = PF02705)' T '34.15' 'transport.potassium' 'nbv0.5scaffold6365_81354-97432' '(at3g02850 : 1039.0) Encodes SKOR, a member of Shaker family potassium ion (K+) channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). Mediates the delivery of K+ from stelar cells to the xylem in the roots towards the shoot. mRNA accumulation is modulated by abscisic acid. K+ gating activity is modulated by external and internal K+.; STELAR K+ outward rectifier (SKOR); FUNCTIONS IN: outward rectifier potassium channel activity, cyclic nucleotide binding; INVOLVED IN: potassium ion transport, response to abscisic acid stimulus; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: gated outwardly-rectifying K+ channel (TAIR:AT5G37500.1); Has 82938 Blast hits to 34972 proteins in 1815 species: Archae - 147; Bacteria - 10317; Metazoa - 39460; Fungi - 7131; Plants - 3765; Viruses - 1138; Other Eukaryotes - 20980 (source: NCBI BLink). & (gnl|cdd|35719 : 422.0) no description available & (q8vyx2|akt1_orysa : 362.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (gnl|cdd|29261 : 110.0) no description available & (reliability: 2078.0) & (original description: Putative SKOR, Description = Potassium channel SKOR, PFAM = PF00520;PF00027;PF11834;PF13857;PF13857)' T '34.15' 'transport.potassium' 'nbv0.5scaffold7176_21649-34691' '(at5g09400 : 1140.0) potassium transporter; K+ uptake permease 7 (KUP7); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: vacuolar membrane, plasma membrane, membrane, plant-type vacuole; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: K+ uptake permease 5 (TAIR:AT4G33530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q69ri8|hak14_orysa : 975.0) Probable potassium transporter 14 (OsHAK14) - Oryza sativa (Rice) & (gnl|cdd|66396 : 844.0) no description available & (reliability: 2280.0) & (original description: Putative POT7, Description = Potassium transporter 7, PFAM = PF02705)' T '34.15' 'transport.potassium' 'niben044scf00000837ctg004_982-9144' '(at3g02850 : 561.0) Encodes SKOR, a member of Shaker family potassium ion (K+) channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). Mediates the delivery of K+ from stelar cells to the xylem in the roots towards the shoot. mRNA accumulation is modulated by abscisic acid. K+ gating activity is modulated by external and internal K+.; STELAR K+ outward rectifier (SKOR); FUNCTIONS IN: outward rectifier potassium channel activity, cyclic nucleotide binding; INVOLVED IN: potassium ion transport, response to abscisic acid stimulus; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: gated outwardly-rectifying K+ channel (TAIR:AT5G37500.1); Has 82938 Blast hits to 34972 proteins in 1815 species: Archae - 147; Bacteria - 10317; Metazoa - 39460; Fungi - 7131; Plants - 3765; Viruses - 1138; Other Eukaryotes - 20980 (source: NCBI BLink). & (gnl|cdd|35719 : 308.0) no description available & (q8vyx2|akt1_orysa : 223.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 1122.0) & (original description: Putative GORK, Description = Potassium channel SKOR, PFAM = PF00520)' T '34.15' 'transport.potassium' 'niben044scf00001362ctg006_8275-9745' '(at4g33530 : 82.4) potassium transporter; K+ uptake permease 5 (KUP5); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: K+ uptake permease 7 (TAIR:AT5G09400.1); Has 3492 Blast hits to 3446 proteins in 1048 species: Archae - 13; Bacteria - 2408; Metazoa - 14; Fungi - 115; Plants - 797; Viruses - 4; Other Eukaryotes - 141 (source: NCBI BLink). & (gnl|cdd|66396 : 80.3) no description available & (reliability: 164.8) & (original description: Putative hak1, Description = Potassium transporter, PFAM = )' T '34.15' 'transport.potassium' 'niben044scf00001362ctg008_1-1633' '(q6vva6|hak1_orysa : 211.0) Potassium transporter 1 (OsHAK1) - Oryza sativa (Rice) & (gnl|cdd|66396 : 207.0) no description available & (at4g13420 : 204.0) Encodes a protein of the KUP/HAK/KT potassium channel class that is upregulated in the roots by K levels.; high affinity K+ transporter 5 (HAK5); FUNCTIONS IN: potassium ion transmembrane transporter activity, potassium:sodium symporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: Potassium transporter family protein (TAIR:AT1G60160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative hak1, Description = Potassium transporter, PFAM = PF02705)' T '34.15' 'transport.potassium' 'niben044scf00005615ctg010_2273-9722' '(at2g26650 : 1102.0) Encodes AKT1, a member of the Shaker family inward rectifying potassium channel predominantly expressed in predominantly in root hairs and root endodermis. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).; K+ transporter 1 (KT1); CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ion transport (InterPro:IPR005821), Ankyrin repeat-containing domain (InterPro:IPR020683), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: K+ transporter 5 (TAIR:AT4G32500.1); Has 86170 Blast hits to 36402 proteins in 1811 species: Archae - 161; Bacteria - 9078; Metazoa - 42367; Fungi - 8163; Plants - 4219; Viruses - 1188; Other Eukaryotes - 20994 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 1051.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (gnl|cdd|35719 : 534.0) no description available & (gnl|cdd|29261 : 95.9) no description available & (reliability: 2204.0) & (original description: Putative AKT1, Description = Potassium channel AKT1, PFAM = PF00027;PF00520;PF11834;PF12796;PF12796)' T '34.15' 'transport.potassium' 'niben044scf00006523ctg004_1-4160' '(at2g35060 : 668.0) potassium transporter; K+ uptake permease 11 (KUP11); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, pollen development; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: K+ uptake permease 10 (TAIR:AT1G31120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7xlc6|hak11_orysa : 635.0) Probable potassium transporter 11 (OsHAK11) - Oryza sativa (Rice) & (gnl|cdd|66396 : 560.0) no description available & (reliability: 1336.0) & (original description: Putative hak1, Description = Potassium transporter, PFAM = PF02705)' T '34.15' 'transport.potassium' 'niben044scf00008254ctg008_1-1382' '(at4g22200 : 100.0) Encodes AKT2, a photosynthate- and light-dependent inward rectifying potassium channel with unique gating properties that are regulated by phosphorylation. Expressed in guard cell protoplasts and in the phloem and xylem of aerial portions of the plant. The channel can coassemble with another K+ channel, KAT1, in vitro. In guard cells, AKT2/3 is responsible for the Ca2+ sensitivity of the K+ uptake channel. In the phloem, it regulates the sucrose/H+ symporters via the phloem potential. AKT2 belongs to the Shaker family K+ channels which include the following groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).; potassium transport 2/3 (KT2/3); FUNCTIONS IN: inward rectifier potassium channel activity, protein binding, cyclic nucleotide binding; INVOLVED IN: regulation of membrane potential, response to abscisic acid stimulus; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: K+ transporter 1 (TAIR:AT2G26650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative AKT2, Description = Potassium channel, PFAM = PF12796)' T '34.15' 'transport.potassium' 'niben044scf00009170ctg002_5215-12355' '(at2g19600 : 94.7) member of Putative potassium proton antiporter family; K+ efflux antiporter 4 (KEA4); FUNCTIONS IN: potassium:hydrogen antiporter activity, potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, cation transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: K+ efflux antiporter 6 (TAIR:AT5G11800.1); Has 10410 Blast hits to 10396 proteins in 2139 species: Archae - 355; Bacteria - 8476; Metazoa - 71; Fungi - 61; Plants - 415; Viruses - 0; Other Eukaryotes - 1032 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative KEA4, Description = Potassium efflux antiporter, PFAM = PF00999)' T '34.15' 'transport.potassium' 'niben044scf00010327ctg005_1-1926' '(at4g18160 : 357.0) Encodes AtTPK3 (KCO6), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins.AtTPK3 is targeted to the vacuolar membrane. May form homomeric ion channels in vivo.; Ca2+ activated outward rectifying K+ channel 6 (KCO6); FUNCTIONS IN: outward rectifier potassium channel activity; INVOLVED IN: potassium ion transport; LOCATED IN: plant-type vacuole membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Potassium channel, two pore-domain (InterPro:IPR003280), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Ion transport 2 (InterPro:IPR013099); BEST Arabidopsis thaliana protein match is: Ca2+ activated outward rectifying K+ channel 2 (TAIR:AT5G46370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36632 : 129.0) no description available & (reliability: 714.0) & (original description: Putative TPK4, Description = Two-pore potassium channel 4, PFAM = PF07885;PF07885)' T '34.15' 'transport.potassium' 'niben044scf00010590ctg023_31930-35753' '(at4g04850 : 119.0) member of Putative potassium transporter family; K+ efflux antiporter 3 (KEA3); FUNCTIONS IN: potassium:hydrogen antiporter activity, potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, cation transport, metabolic process, transmembrane transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153), NAD(P)-binding domain (InterPro:IPR016040), Regulator of K+ conductance, N-terminal (InterPro:IPR003148); BEST Arabidopsis thaliana protein match is: K+ efflux antiporter 1 (TAIR:AT1G01790.1). & (reliability: 238.0) & (original description: Putative KEA3, Description = Glutathione-regulated potassium-efflux system protein kefB, PFAM = )' T '34.15' 'transport.potassium' 'niben044scf00010984ctg001_1-5586' '(at4g13420 : 440.0) Encodes a protein of the KUP/HAK/KT potassium channel class that is upregulated in the roots by K levels.; high affinity K+ transporter 5 (HAK5); FUNCTIONS IN: potassium ion transmembrane transporter activity, potassium:sodium symporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: Potassium transporter family protein (TAIR:AT1G60160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6vva6|hak1_orysa : 419.0) Potassium transporter 1 (OsHAK1) - Oryza sativa (Rice) & (gnl|cdd|66396 : 398.0) no description available & (reliability: 880.0) & (original description: Putative hak1, Description = Putative potassium transporter, PFAM = PF02705)' T '34.15' 'transport.potassium' 'niben044scf00016291ctg000_1-13617' '(at2g19600 : 780.0) member of Putative potassium proton antiporter family; K+ efflux antiporter 4 (KEA4); FUNCTIONS IN: potassium:hydrogen antiporter activity, potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, cation transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: K+ efflux antiporter 6 (TAIR:AT5G11800.1); Has 10410 Blast hits to 10396 proteins in 2139 species: Archae - 355; Bacteria - 8476; Metazoa - 71; Fungi - 61; Plants - 415; Viruses - 0; Other Eukaryotes - 1032 (source: NCBI BLink). & (gnl|cdd|85173 : 207.0) no description available & (gnl|cdd|36863 : 167.0) no description available & (reliability: 1560.0) & (original description: Putative KEA4, Description = K(+) efflux antiporter 4, PFAM = PF00999)' T '34.15' 'transport.potassium' 'niben044scf00024346ctg002_20507-27191' '(at4g32650 : 462.0) Encodes KAT3, a member of the Shaker family of voltage-gated potassium channel subunits. Does not form functional potassium channel on its own. Involved in down-regulating AKT1 and KAT1 channel activity by forming heteromers with AKT1 or KAT1. The Shaker family K+ ion channels include five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inwardly rectifying conductance): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).; ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1 (ATKC1); CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Protein of unknown function DUF3354 (InterPro:IPR021789); BEST Arabidopsis thaliana protein match is: K+ transporter 1 (TAIR:AT2G26650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 330.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (gnl|cdd|35719 : 279.0) no description available & (gnl|cdd|28920 : 82.4) no description available & (reliability: 924.0) & (original description: Putative akt2, Description = Potassium channel KAT3, PFAM = PF11834;PF00027;PF07885)' T '34.15' 'transport.potassium' 'niben044scf00025456ctg007_1016-9839' '(at2g35060 : 1163.0) potassium transporter; K+ uptake permease 11 (KUP11); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, pollen development; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: K+ uptake permease 10 (TAIR:AT1G31120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8vxb1|hak12_orysa : 1135.0) Putative potassium transporter 12 (OsHAK12) - Oryza sativa (Rice) & (gnl|cdd|66396 : 1053.0) no description available & (reliability: 2326.0) & (original description: Putative POT11, Description = Potassium transporter 11, PFAM = PF02705)' T '34.15' 'transport.potassium' 'niben044scf00027140ctg009_1-10180' '(at2g19600 : 440.0) member of Putative potassium proton antiporter family; K+ efflux antiporter 4 (KEA4); FUNCTIONS IN: potassium:hydrogen antiporter activity, potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, cation transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: K+ efflux antiporter 6 (TAIR:AT5G11800.1); Has 10410 Blast hits to 10396 proteins in 2139 species: Archae - 355; Bacteria - 8476; Metazoa - 71; Fungi - 61; Plants - 415; Viruses - 0; Other Eukaryotes - 1032 (source: NCBI BLink). & (gnl|cdd|85173 : 117.0) no description available & (gnl|cdd|36863 : 93.1) no description available & (reliability: 880.0) & (original description: Putative kefC, Description = Kef-type potassium/proton antiporter, CPA2 family, PFAM = PF00999)' T '34.15' 'transport.potassium' 'niben044scf00037546ctg016_13066-26567' '(at4g32650 : 712.0) Encodes KAT3, a member of the Shaker family of voltage-gated potassium channel subunits. Does not form functional potassium channel on its own. Involved in down-regulating AKT1 and KAT1 channel activity by forming heteromers with AKT1 or KAT1. The Shaker family K+ ion channels include five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inwardly rectifying conductance): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).; ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1 (ATKC1); CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Protein of unknown function DUF3354 (InterPro:IPR021789); BEST Arabidopsis thaliana protein match is: K+ transporter 1 (TAIR:AT2G26650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 539.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (gnl|cdd|35719 : 451.0) no description available & (gnl|cdd|28920 : 83.9) no description available & (reliability: 1424.0) & (original description: Putative kdc1, Description = Potassium channel, PFAM = PF11834;PF00520;PF00027)' T '34.15' 'transport.potassium' 'niben044scf00043881ctg001_1-1655' '(at4g00630 : 245.0) member of Putative potassium transporter family; K+ efflux antiporter 2 (KEA2); FUNCTIONS IN: potassium:hydrogen antiporter activity, potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, cation transport, metabolic process, transmembrane transport; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K+/H+ exchanger (InterPro:IPR004771), Cation/H+ exchanger (InterPro:IPR006153), NAD(P)-binding domain (InterPro:IPR016040), Regulator of K+ conductance, N-terminal (InterPro:IPR003148); BEST Arabidopsis thaliana protein match is: K+ efflux antiporter 1 (TAIR:AT1G01790.1). & (reliability: 490.0) & (original description: Putative KEA1, Description = K(+) efflux antiporter 2, chloroplastic, PFAM = PF02254)' T '34.15' 'transport.potassium' 'niben044scf00056166ctg000_4915-18467' '(at2g19600 : 782.0) member of Putative potassium proton antiporter family; K+ efflux antiporter 4 (KEA4); FUNCTIONS IN: potassium:hydrogen antiporter activity, potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, cation transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: K+ efflux antiporter 6 (TAIR:AT5G11800.1); Has 10410 Blast hits to 10396 proteins in 2139 species: Archae - 355; Bacteria - 8476; Metazoa - 71; Fungi - 61; Plants - 415; Viruses - 0; Other Eukaryotes - 1032 (source: NCBI BLink). & (gnl|cdd|85173 : 207.0) no description available & (gnl|cdd|36863 : 169.0) no description available & (reliability: 1564.0) & (original description: Putative KEA4, Description = K(+) efflux antiporter 4, PFAM = PF00999)' T '34.15' 'transport.potassium' 'niben101scf00154_1026998-1036029' '(at1g70300 : 1114.0) potassium transporter; K+ uptake permease 6 (KUP6); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: Potassium transporter family protein (TAIR:AT5G14880.1); Has 3423 Blast hits to 3365 proteins in 1017 species: Archae - 13; Bacteria - 2376; Metazoa - 1; Fungi - 98; Plants - 811; Viruses - 4; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|66396 : 1003.0) no description available & (q67vs5|hak10_orysa : 948.0) Potassium transporter 10 (OsHAK10) - Oryza sativa (Rice) & (reliability: 2228.0) & (original description: Putative POT6, Description = Potassium transporter 6, PFAM = PF02705)' T '34.15' 'transport.potassium' 'niben101scf00326_98416-101885' '(at5g55630 : 266.0) Encodes AtTPK1 (KCO1), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins. AtTPK1 is targeted to the vacuolar membrane. Forms homomeric ion channels in vivo. Voltage-independent and Ca2+-activated K+ channel. Activated by 14-3-3 proteins.; TWO PORE K CHANNEL (KCO1); CONTAINS InterPro DOMAIN/s: Potassium channel, two pore-domain (InterPro:IPR003280), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Ion transport 2 (InterPro:IPR013099); BEST Arabidopsis thaliana protein match is: Ca2+ activated outward rectifying K+ channel 5 (TAIR:AT4G01840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 532.0) & (original description: Putative kco1b, Description = Calcium-activated outward-rectifying potassium channel 1, PFAM = PF07885;PF07885)' T '34.15' 'transport.potassium' 'niben101scf00485_361977-372686' '(at5g51710 : 780.0) member of Putative potassium proton antiporter family; K+ efflux antiporter 5 (KEA5); FUNCTIONS IN: potassium:hydrogen antiporter activity, potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, cation transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: K+ efflux antiporter 6 (TAIR:AT5G11800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85173 : 214.0) no description available & (gnl|cdd|36863 : 158.0) no description available & (reliability: 1560.0) & (original description: Putative KEA5, Description = K(+) efflux antiporter 5, PFAM = PF00999)' T '34.15' 'transport.potassium' 'niben101scf00542_382939-400852' '(at3g02850 : 1253.0) Encodes SKOR, a member of Shaker family potassium ion (K+) channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). Mediates the delivery of K+ from stelar cells to the xylem in the roots towards the shoot. mRNA accumulation is modulated by abscisic acid. K+ gating activity is modulated by external and internal K+.; STELAR K+ outward rectifier (SKOR); FUNCTIONS IN: outward rectifier potassium channel activity, cyclic nucleotide binding; INVOLVED IN: potassium ion transport, response to abscisic acid stimulus; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: gated outwardly-rectifying K+ channel (TAIR:AT5G37500.1); Has 82938 Blast hits to 34972 proteins in 1815 species: Archae - 147; Bacteria - 10317; Metazoa - 39460; Fungi - 7131; Plants - 3765; Viruses - 1138; Other Eukaryotes - 20980 (source: NCBI BLink). & (gnl|cdd|35719 : 486.0) no description available & (q8vyx2|akt1_orysa : 405.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (gnl|cdd|29261 : 114.0) no description available & (reliability: 2506.0) & (original description: Putative SKOR, Description = Potassium channel SKOR, PFAM = PF00027;PF11834;PF00520;PF13857;PF12796)' T '34.15' 'transport.potassium' 'niben101scf00687_416605-421026' '(at4g01840 : 428.0) Encodes AtTPK5, a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins. AtTPK5 is targeted to the vacuolar membrane. May form homomeric ion channels in vivo.; Ca2+ activated outward rectifying K+ channel 5 (KCO5); FUNCTIONS IN: outward rectifier potassium channel activity; INVOLVED IN: potassium ion transport; LOCATED IN: plant-type vacuole membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Potassium channel, two pore-domain (InterPro:IPR003280), Ion transport 2 (InterPro:IPR013099); BEST Arabidopsis thaliana protein match is: Ca2+ activated outward rectifying K+ channel 6 (TAIR:AT4G18160.1); Has 4836 Blast hits to 4447 proteins in 1041 species: Archae - 139; Bacteria - 2196; Metazoa - 1258; Fungi - 189; Plants - 266; Viruses - 0; Other Eukaryotes - 788 (source: NCBI BLink). & (gnl|cdd|36632 : 130.0) no description available & (reliability: 856.0) & (original description: Putative KCO5, Description = Putative calcium-activated outward-rectifying potassium channel 6, PFAM = PF07885;PF07885)' T '34.15' 'transport.potassium' 'niben101scf00821_1046507-1062090' '(at4g32650 : 746.0) Encodes KAT3, a member of the Shaker family of voltage-gated potassium channel subunits. Does not form functional potassium channel on its own. Involved in down-regulating AKT1 and KAT1 channel activity by forming heteromers with AKT1 or KAT1. The Shaker family K+ ion channels include five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inwardly rectifying conductance): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).; ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1 (ATKC1); CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Protein of unknown function DUF3354 (InterPro:IPR021789); BEST Arabidopsis thaliana protein match is: K+ transporter 1 (TAIR:AT2G26650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 542.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (gnl|cdd|35719 : 453.0) no description available & (gnl|cdd|28920 : 83.5) no description available & (reliability: 1492.0) & (original description: Putative kdc1, Description = Potassium channel, PFAM = PF00027;PF00520;PF11834)' T '34.15' 'transport.potassium' 'niben101scf01053_32649-40843' '(at1g60160 : 1157.0) Potassium transporter family protein; FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: K+ uptake permease 7 (TAIR:AT5G09400.1); Has 3447 Blast hits to 3411 proteins in 1044 species: Archae - 13; Bacteria - 2434; Metazoa - 1; Fungi - 101; Plants - 776; Viruses - 4; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|66396 : 955.0) no description available & (q69ri8|hak14_orysa : 814.0) Probable potassium transporter 14 (OsHAK14) - Oryza sativa (Rice) & (reliability: 2314.0) & (original description: Putative hak1, Description = Potassium transporter, PFAM = PF02705)' T '34.15' 'transport.potassium' 'niben101scf01053_57012-64667' '(at1g70300 : 1085.0) potassium transporter; K+ uptake permease 6 (KUP6); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: Potassium transporter family protein (TAIR:AT5G14880.1); Has 3423 Blast hits to 3365 proteins in 1017 species: Archae - 13; Bacteria - 2376; Metazoa - 1; Fungi - 98; Plants - 811; Viruses - 4; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|66396 : 976.0) no description available & (q67vs5|hak10_orysa : 965.0) Potassium transporter 10 (OsHAK10) - Oryza sativa (Rice) & (reliability: 2170.0) & (original description: Putative POT6, Description = Potassium transporter 6, PFAM = PF02705)' T '34.15' 'transport.potassium' 'niben101scf01053_80360-89870' '(at1g70300 : 1046.0) potassium transporter; K+ uptake permease 6 (KUP6); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: Potassium transporter family protein (TAIR:AT5G14880.1); Has 3423 Blast hits to 3365 proteins in 1017 species: Archae - 13; Bacteria - 2376; Metazoa - 1; Fungi - 98; Plants - 811; Viruses - 4; Other Eukaryotes - 120 (source: NCBI BLink). & (q67vs5|hak10_orysa : 974.0) Potassium transporter 10 (OsHAK10) - Oryza sativa (Rice) & (gnl|cdd|66396 : 955.0) no description available & (reliability: 2092.0) & (original description: Putative POT6, Description = Potassium transporter 6, PFAM = PF02705)' T '34.15' 'transport.potassium' 'niben101scf01125_407479-424661' '(at2g35060 : 1197.0) potassium transporter; K+ uptake permease 11 (KUP11); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, pollen development; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: K+ uptake permease 10 (TAIR:AT1G31120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7xlc6|hak11_orysa : 1152.0) Probable potassium transporter 11 (OsHAK11) - Oryza sativa (Rice) & (gnl|cdd|66396 : 1044.0) no description available & (reliability: 2394.0) & (original description: Putative POT11, Description = Potassium transporter 11, PFAM = PF02705)' T '34.15' 'transport.potassium' 'niben101scf01249_378510-401995' '(at3g02850 : 1053.0) Encodes SKOR, a member of Shaker family potassium ion (K+) channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). Mediates the delivery of K+ from stelar cells to the xylem in the roots towards the shoot. mRNA accumulation is modulated by abscisic acid. K+ gating activity is modulated by external and internal K+.; STELAR K+ outward rectifier (SKOR); FUNCTIONS IN: outward rectifier potassium channel activity, cyclic nucleotide binding; INVOLVED IN: potassium ion transport, response to abscisic acid stimulus; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: gated outwardly-rectifying K+ channel (TAIR:AT5G37500.1); Has 82938 Blast hits to 34972 proteins in 1815 species: Archae - 147; Bacteria - 10317; Metazoa - 39460; Fungi - 7131; Plants - 3765; Viruses - 1138; Other Eukaryotes - 20980 (source: NCBI BLink). & (gnl|cdd|35719 : 425.0) no description available & (q8vyx2|akt1_orysa : 362.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (gnl|cdd|29261 : 110.0) no description available & (reliability: 2106.0) & (original description: Putative SKOR, Description = Potassium channel SKOR, PFAM = PF11834;PF00520;PF13857;PF13857;PF00027)' T '34.15' 'transport.potassium' 'niben101scf01259_1064043-1098401' '(at5g46240 : 725.0) Encodes a potassium channel protein (KAT1). ABA triggers KAT1 endocytosis both in epidermal cells as well as guard cells. Upon removal of ABA, KAT1 is recycled back to the plasma membrane. KAT1 is localized within 0.5ñ0.6 μm diameter microdomains at the plasma membrane surface. KAT1 belongs to the Shaker family K+ channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).; potassium channel in Arabidopsis thaliana 1 (KAT1); CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), Ion transport (InterPro:IPR005821), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), RmlC-like jelly roll fold (InterPro:IPR014710), Protein of unknown function DUF3354 (InterPro:IPR021789); BEST Arabidopsis thaliana protein match is: potassium channel in Arabidopsis thaliana 2 (TAIR:AT4G18290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 572.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (gnl|cdd|35719 : 485.0) no description available & (gnl|cdd|28920 : 93.9) no description available & (reliability: 1450.0) & (original description: Putative kdc2, Description = Inwardly rectifying potassium channel subunit, PFAM = PF11834;PF00027;PF00520)' T '34.15' 'transport.potassium' 'niben101scf01396_399184-407086' '(at2g26650 : 1081.0) Encodes AKT1, a member of the Shaker family inward rectifying potassium channel predominantly expressed in predominantly in root hairs and root endodermis. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).; K+ transporter 1 (KT1); CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ion transport (InterPro:IPR005821), Ankyrin repeat-containing domain (InterPro:IPR020683), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: K+ transporter 5 (TAIR:AT4G32500.1); Has 86170 Blast hits to 36402 proteins in 1811 species: Archae - 161; Bacteria - 9078; Metazoa - 42367; Fungi - 8163; Plants - 4219; Viruses - 1188; Other Eukaryotes - 20994 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 1025.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (gnl|cdd|35719 : 532.0) no description available & (gnl|cdd|29261 : 107.0) no description available & (reliability: 2162.0) & (original description: Putative NKT1, Description = Potassium channel NKT1, PFAM = PF00027;PF12796;PF12796;PF00520;PF11834)' T '34.15' 'transport.potassium' 'niben101scf01512_57270-69929' '(at2g19600 : 413.0) member of Putative potassium proton antiporter family; K+ efflux antiporter 4 (KEA4); FUNCTIONS IN: potassium:hydrogen antiporter activity, potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, cation transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: K+ efflux antiporter 6 (TAIR:AT5G11800.1); Has 10410 Blast hits to 10396 proteins in 2139 species: Archae - 355; Bacteria - 8476; Metazoa - 71; Fungi - 61; Plants - 415; Viruses - 0; Other Eukaryotes - 1032 (source: NCBI BLink). & (gnl|cdd|85173 : 118.0) no description available & (gnl|cdd|36863 : 115.0) no description available & (reliability: 826.0) & (original description: Putative kefC, Description = Kef-type potassium/proton antiporter, CPA2 family, PFAM = PF00999)' T '34.15' 'transport.potassium' 'niben101scf01649_8585-16526' '(at2g40540 : 1263.0) putative potassium transporter AtKT2p (AtKT2) mRNA,; potassium transporter 2 (KT2); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: Potassium transporter family protein (TAIR:AT5G14880.1); Has 3469 Blast hits to 3373 proteins in 1023 species: Archae - 13; Bacteria - 2384; Metazoa - 1; Fungi - 99; Plants - 847; Viruses - 4; Other Eukaryotes - 121 (source: NCBI BLink). & (q8vxb5|hak8_orysa : 1144.0) Putative potassium transporter 8 (OsHAK8) - Oryza sativa (Rice) & (gnl|cdd|66396 : 1007.0) no description available & (reliability: 2526.0) & (original description: Putative POT2, Description = Potassium transporter 2, PFAM = PF02705)' T '34.15' 'transport.potassium' 'niben101scf01739_126289-130963' '(at2g35060 : 531.0) potassium transporter; K+ uptake permease 11 (KUP11); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, pollen development; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: K+ uptake permease 10 (TAIR:AT1G31120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8vxb1|hak12_orysa : 513.0) Putative potassium transporter 12 (OsHAK12) - Oryza sativa (Rice) & (gnl|cdd|66396 : 463.0) no description available & (reliability: 1062.0) & (original description: Putative hak1, Description = Potassium transporter, PFAM = PF02705)' T '34.15' 'transport.potassium' 'niben101scf01785_623427-631474' '(at4g18160 : 439.0) Encodes AtTPK3 (KCO6), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins.AtTPK3 is targeted to the vacuolar membrane. May form homomeric ion channels in vivo.; Ca2+ activated outward rectifying K+ channel 6 (KCO6); FUNCTIONS IN: outward rectifier potassium channel activity; INVOLVED IN: potassium ion transport; LOCATED IN: plant-type vacuole membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Potassium channel, two pore-domain (InterPro:IPR003280), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Ion transport 2 (InterPro:IPR013099); BEST Arabidopsis thaliana protein match is: Ca2+ activated outward rectifying K+ channel 2 (TAIR:AT5G46370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36632 : 133.0) no description available & (reliability: 878.0) & (original description: Putative TPK3, Description = Two-pore potassium channel 3, PFAM = PF07885;PF07885)' T '34.15' 'transport.potassium' 'niben101scf01812_134726-170202' '(at5g55000 : 353.0) FH protein interacting protein FIP2; FIP2; FUNCTIONS IN: voltage-gated potassium channel activity; INVOLVED IN: potassium ion transport; LOCATED IN: voltage-gated potassium channel complex, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentapeptide repeat (InterPro:IPR001646), BTB/POZ fold (InterPro:IPR011333), Potassium channel, voltage dependent, Kv, tetramerisation (InterPro:IPR003131), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G44920.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36878 : 295.0) no description available & (gnl|cdd|31548 : 81.8) no description available & (reliability: 706.0) & (original description: Putative FIP2, Description = FH protein interacting protein FIP2, PFAM = PF00805;PF00805;PF02214)' T '34.15' 'transport.potassium' 'niben101scf02048_5157-8515' '(at5g55630 : 339.0) Encodes AtTPK1 (KCO1), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins. AtTPK1 is targeted to the vacuolar membrane. Forms homomeric ion channels in vivo. Voltage-independent and Ca2+-activated K+ channel. Activated by 14-3-3 proteins.; TWO PORE K CHANNEL (KCO1); CONTAINS InterPro DOMAIN/s: Potassium channel, two pore-domain (InterPro:IPR003280), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Ion transport 2 (InterPro:IPR013099); BEST Arabidopsis thaliana protein match is: Ca2+ activated outward rectifying K+ channel 5 (TAIR:AT4G01840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36632 : 90.6) no description available & (reliability: 678.0) & (original description: Putative TPKA, Description = Two pore potassium channel a, PFAM = PF07885;PF07885)' T '34.15' 'transport.potassium' 'niben101scf02133_309706-337167' '(at5g09400 : 1192.0) potassium transporter; K+ uptake permease 7 (KUP7); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: vacuolar membrane, plasma membrane, membrane, plant-type vacuole; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: K+ uptake permease 5 (TAIR:AT4G33530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q69ri8|hak14_orysa : 1021.0) Probable potassium transporter 14 (OsHAK14) - Oryza sativa (Rice) & (gnl|cdd|66396 : 824.0) no description available & (reliability: 2384.0) & (original description: Putative POT7, Description = Potassium transporter 7, PFAM = PF02705)' T '34.15' 'transport.potassium' 'niben101scf02232_268069-273109' '(at5g46240 : 792.0) Encodes a potassium channel protein (KAT1). ABA triggers KAT1 endocytosis both in epidermal cells as well as guard cells. Upon removal of ABA, KAT1 is recycled back to the plasma membrane. KAT1 is localized within 0.5ñ0.6 μm diameter microdomains at the plasma membrane surface. KAT1 belongs to the Shaker family K+ channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).; potassium channel in Arabidopsis thaliana 1 (KAT1); CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), Ion transport (InterPro:IPR005821), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), RmlC-like jelly roll fold (InterPro:IPR014710), Protein of unknown function DUF3354 (InterPro:IPR021789); BEST Arabidopsis thaliana protein match is: potassium channel in Arabidopsis thaliana 2 (TAIR:AT4G18290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 603.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (gnl|cdd|35719 : 519.0) no description available & (gnl|cdd|28920 : 93.5) no description available & (reliability: 1584.0) & (original description: Putative KAT1, Description = Potassium channel KAT1, PFAM = PF00520;PF00027;PF11834)' T '34.15' 'transport.potassium' 'niben101scf02513_140461-156263' '(at5g09400 : 1127.0) potassium transporter; K+ uptake permease 7 (KUP7); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: vacuolar membrane, plasma membrane, membrane, plant-type vacuole; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: K+ uptake permease 5 (TAIR:AT4G33530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q69ri8|hak14_orysa : 950.0) Probable potassium transporter 14 (OsHAK14) - Oryza sativa (Rice) & (gnl|cdd|66396 : 833.0) no description available & (reliability: 2254.0) & (original description: Putative POT7, Description = Potassium transporter 7, PFAM = PF02705)' T '34.15' 'transport.potassium' 'niben101scf02533_16081-19582' '(at3g09030 : 488.0) BTB/POZ domain-containing protein; FUNCTIONS IN: voltage-gated potassium channel activity; INVOLVED IN: potassium ion transport; LOCATED IN: voltage-gated potassium channel complex, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ fold (InterPro:IPR011333), Potassium channel, voltage dependent, Kv, tetramerisation (InterPro:IPR003131), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain with WD40/YVTN repeat-like protein (TAIR:AT5G41330.1); Has 1593 Blast hits to 1581 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 1335; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|37925 : 287.0) no description available & (reliability: 976.0) & (original description: Putative At3g09030, Description = BTB/POZ domain-containing protein At3g09030, PFAM = PF02214)' T '34.15' 'transport.potassium' 'niben101scf02979_203540-228215' '(at4g04850 : 785.0) member of Putative potassium transporter family; K+ efflux antiporter 3 (KEA3); FUNCTIONS IN: potassium:hydrogen antiporter activity, potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, cation transport, metabolic process, transmembrane transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153), NAD(P)-binding domain (InterPro:IPR016040), Regulator of K+ conductance, N-terminal (InterPro:IPR003148); BEST Arabidopsis thaliana protein match is: K+ efflux antiporter 1 (TAIR:AT1G01790.1). & (gnl|cdd|81159 : 334.0) no description available & (gnl|cdd|36863 : 159.0) no description available & (reliability: 1570.0) & (original description: Putative KEA3, Description = K(+) efflux antiporter 3, chloroplastic, PFAM = PF02254;PF00999)' T '34.15' 'transport.potassium' 'niben101scf03839_152791-184154' '(at2g19600 : 704.0) member of Putative potassium proton antiporter family; K+ efflux antiporter 4 (KEA4); FUNCTIONS IN: potassium:hydrogen antiporter activity, potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, cation transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: K+ efflux antiporter 6 (TAIR:AT5G11800.1); Has 10410 Blast hits to 10396 proteins in 2139 species: Archae - 355; Bacteria - 8476; Metazoa - 71; Fungi - 61; Plants - 415; Viruses - 0; Other Eukaryotes - 1032 (source: NCBI BLink). & (gnl|cdd|85173 : 209.0) no description available & (gnl|cdd|36863 : 172.0) no description available & (reliability: 1408.0) & (original description: Putative KEA4, Description = K(+) efflux antiporter 4, PFAM = PF00999)' T '34.15' 'transport.potassium' 'niben101scf03978_863655-869565' '(gnl|cdd|66396 : 741.0) no description available & (at2g40540 : 721.0) putative potassium transporter AtKT2p (AtKT2) mRNA,; potassium transporter 2 (KT2); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: Potassium transporter family protein (TAIR:AT5G14880.1); Has 3469 Blast hits to 3373 proteins in 1023 species: Archae - 13; Bacteria - 2384; Metazoa - 1; Fungi - 99; Plants - 847; Viruses - 4; Other Eukaryotes - 121 (source: NCBI BLink). & (q7xiv8|hak9_orysa : 684.0) Probable potassium transporter 9 (OsHAK9) - Oryza sativa (Rice) & (reliability: 1442.0) & (original description: Putative KUP13, Description = Potassium transporter, PFAM = PF02705)' T '34.15' 'transport.potassium' 'niben101scf04103_1116867-1128800' '(at2g26650 : 1055.0) Encodes AKT1, a member of the Shaker family inward rectifying potassium channel predominantly expressed in predominantly in root hairs and root endodermis. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).; K+ transporter 1 (KT1); CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ion transport (InterPro:IPR005821), Ankyrin repeat-containing domain (InterPro:IPR020683), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: K+ transporter 5 (TAIR:AT4G32500.1); Has 86170 Blast hits to 36402 proteins in 1811 species: Archae - 161; Bacteria - 9078; Metazoa - 42367; Fungi - 8163; Plants - 4219; Viruses - 1188; Other Eukaryotes - 20994 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 951.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (gnl|cdd|35719 : 477.0) no description available & (gnl|cdd|29261 : 109.0) no description available & (reliability: 2110.0) & (original description: Putative AKT1, Description = Potassium channel AKT1, PFAM = PF00520;PF12796;PF12796;PF00027;PF11834)' T '34.15' 'transport.potassium' 'niben101scf04126_537210-558266' '(at4g32650 : 719.0) Encodes KAT3, a member of the Shaker family of voltage-gated potassium channel subunits. Does not form functional potassium channel on its own. Involved in down-regulating AKT1 and KAT1 channel activity by forming heteromers with AKT1 or KAT1. The Shaker family K+ ion channels include five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inwardly rectifying conductance): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).; ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1 (ATKC1); CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Protein of unknown function DUF3354 (InterPro:IPR021789); BEST Arabidopsis thaliana protein match is: K+ transporter 1 (TAIR:AT2G26650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 524.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (gnl|cdd|35719 : 437.0) no description available & (gnl|cdd|28920 : 86.2) no description available & (reliability: 1438.0) & (original description: Putative kdc1, Description = Potassium channel, PFAM = PF00520;PF00027;PF11834)' T '34.15' 'transport.potassium' 'niben101scf04444_393796-397166' '(at5g55630 : 389.0) Encodes AtTPK1 (KCO1), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins. AtTPK1 is targeted to the vacuolar membrane. Forms homomeric ion channels in vivo. Voltage-independent and Ca2+-activated K+ channel. Activated by 14-3-3 proteins.; TWO PORE K CHANNEL (KCO1); CONTAINS InterPro DOMAIN/s: Potassium channel, two pore-domain (InterPro:IPR003280), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Ion transport 2 (InterPro:IPR013099); BEST Arabidopsis thaliana protein match is: Ca2+ activated outward rectifying K+ channel 5 (TAIR:AT4G01840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36632 : 92.2) no description available & (reliability: 778.0) & (original description: Putative TPK1, Description = Two-pore potassium channel 1, PFAM = PF07885;PF07885)' T '34.15' 'transport.potassium' 'niben101scf04563_167139-175781' '(q67uc7|hak17_orysa : 961.0) Probable potassium transporter 17 (OsHAK17) - Oryza sativa (Rice) & (gnl|cdd|66396 : 635.0) no description available & (at2g30070 : 507.0) Encodes a high affinity potassium transporter.; potassium transporter 1 (KT1); CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: Potassium transporter family protein (TAIR:AT5G14880.1); Has 3625 Blast hits to 3386 proteins in 1031 species: Archae - 13; Bacteria - 2398; Metazoa - 1; Fungi - 100; Plants - 989; Viruses - 4; Other Eukaryotes - 120 (source: NCBI BLink). & (reliability: 1014.0) & (original description: Putative HAK17, Description = Probable potassium transporter 17, PFAM = PF02705)' T '34.15' 'transport.potassium' 'niben101scf04764_1126647-1134004' '(at4g32650 : 547.0) Encodes KAT3, a member of the Shaker family of voltage-gated potassium channel subunits. Does not form functional potassium channel on its own. Involved in down-regulating AKT1 and KAT1 channel activity by forming heteromers with AKT1 or KAT1. The Shaker family K+ ion channels include five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inwardly rectifying conductance): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).; ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1 (ATKC1); CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Protein of unknown function DUF3354 (InterPro:IPR021789); BEST Arabidopsis thaliana protein match is: K+ transporter 1 (TAIR:AT2G26650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 472.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (gnl|cdd|35719 : 406.0) no description available & (gnl|cdd|28920 : 81.6) no description available & (reliability: 1094.0) & (original description: Putative akt2, Description = Potassium channel KAT3, PFAM = PF00027;PF00520)' T '34.15' 'transport.potassium' 'niben101scf04840_208914-217498' '(at4g22200 : 1064.0) Encodes AKT2, a photosynthate- and light-dependent inward rectifying potassium channel with unique gating properties that are regulated by phosphorylation. Expressed in guard cell protoplasts and in the phloem and xylem of aerial portions of the plant. The channel can coassemble with another K+ channel, KAT1, in vitro. In guard cells, AKT2/3 is responsible for the Ca2+ sensitivity of the K+ uptake channel. In the phloem, it regulates the sucrose/H+ symporters via the phloem potential. AKT2 belongs to the Shaker family K+ channels which include the following groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).; potassium transport 2/3 (KT2/3); FUNCTIONS IN: inward rectifier potassium channel activity, protein binding, cyclic nucleotide binding; INVOLVED IN: regulation of membrane potential, response to abscisic acid stimulus; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: K+ transporter 1 (TAIR:AT2G26650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 633.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (gnl|cdd|35719 : 492.0) no description available & (gnl|cdd|29261 : 110.0) no description available & (reliability: 2128.0) & (original description: Putative AKT2, Description = Potassium channel AKT2/3, PFAM = PF13857;PF11834;PF00520;PF00027;PF12796)' T '34.15' 'transport.potassium' 'niben101scf05132_198911-206236' '(at1g04690 : 607.0) potassium channel beta subunit 1 (KAB1); FUNCTIONS IN: oxidoreductase activity, potassium channel activity; INVOLVED IN: oxidation reduction, potassium ion transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Potassium channel, voltage-dependent, beta subunit, KCNAB-related (InterPro:IPR005399); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60690.1); Has 29181 Blast hits to 29146 proteins in 2493 species: Archae - 642; Bacteria - 19972; Metazoa - 899; Fungi - 1968; Plants - 978; Viruses - 0; Other Eukaryotes - 4722 (source: NCBI BLink). & (q40648|kcab_orysa : 588.0) Probable voltage-gated potassium channel subunit beta (K(+) channel subunit beta) - Oryza sativa (Rice) & (gnl|cdd|36788 : 335.0) no description available & (gnl|cdd|31011 : 277.0) no description available & (reliability: 1214.0) & (original description: Putative kb1, Description = Putative beta-subunit of K+ channels, PFAM = PF00248)' T '34.15' 'transport.potassium' 'niben101scf05360_78697-100811' '(at3g02850 : 1234.0) Encodes SKOR, a member of Shaker family potassium ion (K+) channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). Mediates the delivery of K+ from stelar cells to the xylem in the roots towards the shoot. mRNA accumulation is modulated by abscisic acid. K+ gating activity is modulated by external and internal K+.; STELAR K+ outward rectifier (SKOR); FUNCTIONS IN: outward rectifier potassium channel activity, cyclic nucleotide binding; INVOLVED IN: potassium ion transport, response to abscisic acid stimulus; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: gated outwardly-rectifying K+ channel (TAIR:AT5G37500.1); Has 82938 Blast hits to 34972 proteins in 1815 species: Archae - 147; Bacteria - 10317; Metazoa - 39460; Fungi - 7131; Plants - 3765; Viruses - 1138; Other Eukaryotes - 20980 (source: NCBI BLink). & (gnl|cdd|35719 : 487.0) no description available & (q8vyx2|akt1_orysa : 397.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (gnl|cdd|29261 : 106.0) no description available & (reliability: 2468.0) & (original description: Putative SKOR, Description = Potassium channel SKOR, PFAM = PF00520;PF12796;PF00027;PF13857;PF11834)' T '34.15' 'transport.potassium' 'niben101scf07168_58738-73659' '(at4g00630 : 969.0) member of Putative potassium transporter family; K+ efflux antiporter 2 (KEA2); FUNCTIONS IN: potassium:hydrogen antiporter activity, potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, cation transport, metabolic process, transmembrane transport; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K+/H+ exchanger (InterPro:IPR004771), Cation/H+ exchanger (InterPro:IPR006153), NAD(P)-binding domain (InterPro:IPR016040), Regulator of K+ conductance, N-terminal (InterPro:IPR003148); BEST Arabidopsis thaliana protein match is: K+ efflux antiporter 1 (TAIR:AT1G01790.1). & (gnl|cdd|81159 : 351.0) no description available & (gnl|cdd|36863 : 177.0) no description available & (reliability: 1938.0) & (original description: Putative kdsD, Description = Potassium transporter KefB, PFAM = PF00999)' T '34.15' 'transport.potassium' 'niben101scf07466_123927-136355' '(at3g02050 : 1129.0) potassium transporter KUP3p (KUP3); K+ uptake transporter 3 (KUP3); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, response to external stimulus; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: Potassium transporter family protein (TAIR:AT4G23640.1); Has 3477 Blast hits to 3392 proteins in 1029 species: Archae - 13; Bacteria - 2401; Metazoa - 1; Fungi - 102; Plants - 838; Viruses - 4; Other Eukaryotes - 118 (source: NCBI BLink). & (q942x8|hak2_orysa : 1058.0) Probable potassium transporter 2 (OsHAK2) - Oryza sativa (Rice) & (gnl|cdd|66396 : 930.0) no description available & (reliability: 2258.0) & (original description: Putative POT4, Description = Potassium transporter 4, PFAM = PF02705)' T '34.15' 'transport.potassium' 'niben101scf07466_127836-135545' '(at3g02050 : 483.0) potassium transporter KUP3p (KUP3); K+ uptake transporter 3 (KUP3); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, response to external stimulus; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: Potassium transporter family protein (TAIR:AT4G23640.1); Has 3477 Blast hits to 3392 proteins in 1029 species: Archae - 13; Bacteria - 2401; Metazoa - 1; Fungi - 102; Plants - 838; Viruses - 4; Other Eukaryotes - 118 (source: NCBI BLink). & (q942x8|hak2_orysa : 471.0) Probable potassium transporter 2 (OsHAK2) - Oryza sativa (Rice) & (gnl|cdd|66396 : 432.0) no description available & (reliability: 966.0) & (original description: Putative hak1, Description = Potassium transporter, PFAM = PF02705;PF02705)' T '34.15' 'transport.potassium' 'niben101scf08341_43106-53861' '(at2g26650 : 1242.0) Encodes AKT1, a member of the Shaker family inward rectifying potassium channel predominantly expressed in predominantly in root hairs and root endodermis. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).; K+ transporter 1 (KT1); CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ion transport (InterPro:IPR005821), Ankyrin repeat-containing domain (InterPro:IPR020683), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: K+ transporter 5 (TAIR:AT4G32500.1); Has 86170 Blast hits to 36402 proteins in 1811 species: Archae - 161; Bacteria - 9078; Metazoa - 42367; Fungi - 8163; Plants - 4219; Viruses - 1188; Other Eukaryotes - 20994 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 1134.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (gnl|cdd|35719 : 578.0) no description available & (gnl|cdd|29261 : 108.0) no description available & (reliability: 2484.0) & (original description: Putative AKT1, Description = Potassium channel AKT1, PFAM = PF12796;PF12796;PF00027;PF00520;PF11834)' T '34.15' 'transport.potassium' 'niben101scf08665_82740-102805' '(at4g00630 : 1222.0) member of Putative potassium transporter family; K+ efflux antiporter 2 (KEA2); FUNCTIONS IN: potassium:hydrogen antiporter activity, potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, cation transport, metabolic process, transmembrane transport; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K+/H+ exchanger (InterPro:IPR004771), Cation/H+ exchanger (InterPro:IPR006153), NAD(P)-binding domain (InterPro:IPR016040), Regulator of K+ conductance, N-terminal (InterPro:IPR003148); BEST Arabidopsis thaliana protein match is: K+ efflux antiporter 1 (TAIR:AT1G01790.1). & (gnl|cdd|81159 : 403.0) no description available & (gnl|cdd|36863 : 216.0) no description available & (reliability: 2444.0) & (original description: Putative kea1, Description = Potassium transporter KefB, PFAM = PF02254;PF00999)' T '34.15' 'transport.potassium' 'niben101scf09230_453963-467147' '(at2g35060 : 1174.0) potassium transporter; K+ uptake permease 11 (KUP11); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, pollen development; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: K+ uptake permease 10 (TAIR:AT1G31120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8vxb1|hak12_orysa : 1138.0) Putative potassium transporter 12 (OsHAK12) - Oryza sativa (Rice) & (gnl|cdd|66396 : 1050.0) no description available & (reliability: 2348.0) & (original description: Putative POT11, Description = Potassium transporter 11, PFAM = PF02705)' T '34.15' 'transport.potassium' 'niben101scf09560_240254-243378' '(q7xlc6|hak11_orysa : 193.0) Probable potassium transporter 11 (OsHAK11) - Oryza sativa (Rice) & (at1g31120 : 180.0) potassium transporter; K+ uptake permease 10 (KUP10); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: K+ uptake permease 11 (TAIR:AT2G35060.1); Has 3472 Blast hits to 3422 proteins in 1051 species: Archae - 13; Bacteria - 2438; Metazoa - 1; Fungi - 105; Plants - 791; Viruses - 4; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|66396 : 127.0) no description available & (reliability: 360.0) & (original description: Putative hak1, Description = Potassium transporter, PFAM = PF02705)' T '34.15' 'transport.potassium' 'niben101scf10215_10917-14730' '(at3g02050 : 380.0) potassium transporter KUP3p (KUP3); K+ uptake transporter 3 (KUP3); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, response to external stimulus; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: Potassium transporter family protein (TAIR:AT4G23640.1); Has 3477 Blast hits to 3392 proteins in 1029 species: Archae - 13; Bacteria - 2401; Metazoa - 1; Fungi - 102; Plants - 838; Viruses - 4; Other Eukaryotes - 118 (source: NCBI BLink). & (q942x8|hak2_orysa : 355.0) Probable potassium transporter 2 (OsHAK2) - Oryza sativa (Rice) & (gnl|cdd|66396 : 335.0) no description available & (reliability: 760.0) & (original description: Putative hak1, Description = Potassium transporter, PFAM = PF02705)' T '34.15' 'transport.potassium' 'niben101scf10215_10956-18662' '(at3g02050 : 614.0) potassium transporter KUP3p (KUP3); K+ uptake transporter 3 (KUP3); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, response to external stimulus; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: Potassium transporter family protein (TAIR:AT4G23640.1); Has 3477 Blast hits to 3392 proteins in 1029 species: Archae - 13; Bacteria - 2401; Metazoa - 1; Fungi - 102; Plants - 838; Viruses - 4; Other Eukaryotes - 118 (source: NCBI BLink). & (q942x8|hak2_orysa : 588.0) Probable potassium transporter 2 (OsHAK2) - Oryza sativa (Rice) & (gnl|cdd|66396 : 569.0) no description available & (reliability: 1228.0) & (original description: Putative hak1, Description = Potassium transporter, PFAM = PF02705)' T '34.15' 'transport.potassium' 'niben101scf11689_373373-376761' '(at5g41330 : 528.0) BTB/POZ domain with WD40/YVTN repeat-like protein; FUNCTIONS IN: voltage-gated potassium channel activity; INVOLVED IN: potassium ion transport; LOCATED IN: voltage-gated potassium channel complex, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), BTB/POZ fold (InterPro:IPR011333), Potassium channel, voltage dependent, Kv, tetramerisation (InterPro:IPR003131), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT3G09030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37925 : 301.0) no description available & (reliability: 1056.0) & (original description: Putative At5g41330, Description = BTB/POZ domain-containing protein At5g41330, PFAM = PF02214)' T '34.15' 'transport.potassium' 'niben101scf11991_165167-168486' '(at2g24240 : 761.0) BTB/POZ domain with WD40/YVTN repeat-like protein; FUNCTIONS IN: voltage-gated potassium channel activity; INVOLVED IN: potassium ion transport; LOCATED IN: voltage-gated potassium channel complex, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), BTB/POZ fold (InterPro:IPR011333), Potassium channel, voltage dependent, Kv, tetramerisation (InterPro:IPR003131), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain with WD40/YVTN repeat-like protein (TAIR:AT4G30940.1); Has 926 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 2; Metazoa - 686; Fungi - 7; Plants - 126; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|37925 : 497.0) no description available & (reliability: 1522.0) & (original description: Putative At2g24240, Description = BTB/POZ domain-containing protein At2g24240, PFAM = PF02214)' T '34.15' 'transport.potassium' 'niben101scf13000_434006-457579' '(at2g19600 : 700.0) member of Putative potassium proton antiporter family; K+ efflux antiporter 4 (KEA4); FUNCTIONS IN: potassium:hydrogen antiporter activity, potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, cation transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: K+ efflux antiporter 6 (TAIR:AT5G11800.1); Has 10410 Blast hits to 10396 proteins in 2139 species: Archae - 355; Bacteria - 8476; Metazoa - 71; Fungi - 61; Plants - 415; Viruses - 0; Other Eukaryotes - 1032 (source: NCBI BLink). & (gnl|cdd|85173 : 186.0) no description available & (gnl|cdd|36863 : 145.0) no description available & (reliability: 1400.0) & (original description: Putative kefC, Description = Kef-type potassium/proton antiporter, CPA2 family, PFAM = PF00999;PF00999)' T '34.15' 'transport.potassium' 'niben101scf13455_53298-71930' '(at3g02850 : 1222.0) Encodes SKOR, a member of Shaker family potassium ion (K+) channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). Mediates the delivery of K+ from stelar cells to the xylem in the roots towards the shoot. mRNA accumulation is modulated by abscisic acid. K+ gating activity is modulated by external and internal K+.; STELAR K+ outward rectifier (SKOR); FUNCTIONS IN: outward rectifier potassium channel activity, cyclic nucleotide binding; INVOLVED IN: potassium ion transport, response to abscisic acid stimulus; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: gated outwardly-rectifying K+ channel (TAIR:AT5G37500.1); Has 82938 Blast hits to 34972 proteins in 1815 species: Archae - 147; Bacteria - 10317; Metazoa - 39460; Fungi - 7131; Plants - 3765; Viruses - 1138; Other Eukaryotes - 20980 (source: NCBI BLink). & (gnl|cdd|35719 : 483.0) no description available & (q8vyx2|akt1_orysa : 399.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (gnl|cdd|29261 : 108.0) no description available & (reliability: 2444.0) & (original description: Putative SKOR, Description = Potassium channel SKOR, PFAM = PF13637;PF00520;PF12796;PF11834;PF00027)' T '34.15' 'transport.potassium' 'niben101scf14166_59267-68046' '(at4g13420 : 948.0) Encodes a protein of the KUP/HAK/KT potassium channel class that is upregulated in the roots by K levels.; high affinity K+ transporter 5 (HAK5); FUNCTIONS IN: potassium ion transmembrane transporter activity, potassium:sodium symporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: Potassium transporter family protein (TAIR:AT1G60160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66396 : 874.0) no description available & (q6vva6|hak1_orysa : 830.0) Potassium transporter 1 (OsHAK1) - Oryza sativa (Rice) & (reliability: 1896.0) & (original description: Putative POT5, Description = Potassium transporter 5, PFAM = PF02705)' T '34.15' 'transport.potassium' 'niben101scf27305_15289-21784' '(at5g46240 : 694.0) Encodes a potassium channel protein (KAT1). ABA triggers KAT1 endocytosis both in epidermal cells as well as guard cells. Upon removal of ABA, KAT1 is recycled back to the plasma membrane. KAT1 is localized within 0.5ñ0.6 μm diameter microdomains at the plasma membrane surface. KAT1 belongs to the Shaker family K+ channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).; potassium channel in Arabidopsis thaliana 1 (KAT1); CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), Ion transport (InterPro:IPR005821), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), RmlC-like jelly roll fold (InterPro:IPR014710), Protein of unknown function DUF3354 (InterPro:IPR021789); BEST Arabidopsis thaliana protein match is: potassium channel in Arabidopsis thaliana 2 (TAIR:AT4G18290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 580.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (gnl|cdd|35719 : 484.0) no description available & (gnl|cdd|28920 : 91.6) no description available & (reliability: 1388.0) & (original description: Putative kdc2, Description = Inwardly rectifying potassium channel subunit, PFAM = PF00520;PF00027;PF11834)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.3scaffold105_181729-183614' '(at1g71960 : 125.0) Encodes a plasma membrane localized ABC transporter involved in abscisic acid transport and responses.; ATP-binding casette family G25 (ABCG25); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ATP-binding cassette 14 (TAIR:AT1G31770.1); Has 400795 Blast hits to 363827 proteins in 4147 species: Archae - 6947; Bacteria - 316897; Metazoa - 8938; Fungi - 6866; Plants - 5594; Viruses - 13; Other Eukaryotes - 55540 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative WBC26, Description = ABC transporter G family member 25, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.3scaffold10884_18659-27663' '(gnl|cdd|35278 : 1315.0) no description available & (at3g28860 : 901.0) Belongs to the family of ATP-binding cassette (ABC) transporters. Also known as AtMDR11 and PGP19. Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Acts upstream of phyA in regulating hypocotyl elongation and gravitropic response. Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AtPGP1.; ATP binding cassette subfamily B19 (ABCB19); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, auxin efflux transmembrane transporter activity; INVOLVED IN: in 14 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP binding cassette subfamily B1 (TAIR:AT2G36910.1); Has 832220 Blast hits to 388750 proteins in 4155 species: Archae - 14331; Bacteria - 653917; Metazoa - 17455; Fungi - 11958; Plants - 9253; Viruses - 33; Other Eukaryotes - 125273 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 819.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (gnl|cdd|31327 : 388.0) no description available & (reliability: 1802.0) & (original description: Putative PGSC0003DMG400022905, Description = ABC transporter B family member 19, PFAM = PF00005;PF00005;PF00664;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.3scaffold12293_8369-25263' '(at3g47780 : 1195.0) member of ATH subfamily; ABC2 homolog 6 (ATH6); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 2 (TAIR:AT3G47740.1); Has 392088 Blast hits to 359274 proteins in 4025 species: Archae - 7301; Bacteria - 309060; Metazoa - 8340; Fungi - 5303; Plants - 5008; Viruses - 16; Other Eukaryotes - 57060 (source: NCBI BLink). & (gnl|cdd|35282 : 608.0) no description available & (gnl|cdd|73022 : 290.0) no description available & (q9mun1|cysa_mesvi : 95.5) Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Mesostigma viride & (reliability: 2390.0) & (original description: Putative ABCA7, Description = ABC transporter A family member 7, PFAM = PF12698;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.3scaffold24020_1-12359' '(at4g38380 : 487.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G38330.1); Has 13476 Blast hits to 13444 proteins in 2154 species: Archae - 331; Bacteria - 10835; Metazoa - 81; Fungi - 150; Plants - 389; Viruses - 0; Other Eukaryotes - 1690 (source: NCBI BLink). & (gnl|cdd|30880 : 168.0) no description available & (gnl|cdd|36561 : 140.0) no description available & (reliability: 974.0) & (original description: Putative DTX45, Description = Protein DETOXIFICATION 45, chloroplastic, PFAM = PF01554;PF01554)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.3scaffold24020_3868-10138' '(at4g38380 : 354.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G38330.1); Has 13476 Blast hits to 13444 proteins in 2154 species: Archae - 331; Bacteria - 10835; Metazoa - 81; Fungi - 150; Plants - 389; Viruses - 0; Other Eukaryotes - 1690 (source: NCBI BLink). & (gnl|cdd|30880 : 116.0) no description available & (gnl|cdd|36561 : 91.2) no description available & (reliability: 708.0) & (original description: Putative mate2, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554;PF01554)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.3scaffold31380_2128-12306' '(at5g58270 : 557.0) Encodes a mitochondrial half-molecule ABC transporter, a member of ATM subfamily. Mutants are dwarfed, chlorotic plants with altered leaf morphology. ATM3 transcription is induced by Cd(II) or Pb(II). Involved in heavy metal resistance. Arabidopsis thaliana has three ATM genes, namely ATM1, ATM2 and ATM3. Only ATM3 has an important function for plant growth. Role in Moco biosynthesis.; ABC transporter of the mitochondrion 3 (ATM3); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter of the mitochondrion 1 (TAIR:AT4G28630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35280 : 450.0) no description available & (gnl|cdd|34862 : 315.0) no description available & (reliability: 1114.0) & (original description: Putative ABCB7, Description = ATP-binding cassette sub-family B member 7, mitochondrial, PFAM = PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.3scaffold33169_7984-14719' '(at1g32500 : 558.0) Encodes a member of a heterogenous group of non-intrinsic ATP-binding cassette (ABC) proteins. Members of this group bear no close resemblance to each other nor to representatives of specific ABC protein subfamilies from other organisms. This grouping is arbitrary and will likely change upon acquisition of further data.; non-intrinsic ABC protein 6 (NAP6); CONTAINS InterPro DOMAIN/s: SUF system FeS cluster assembly, SufBD (InterPro:IPR000825); BEST Arabidopsis thaliana protein match is: ATP binding cassette protein 1 (TAIR:AT4G04770.1); Has 9763 Blast hits to 9763 proteins in 1806 species: Archae - 246; Bacteria - 6215; Metazoa - 1; Fungi - 6; Plants - 107; Viruses - 0; Other Eukaryotes - 3188 (source: NCBI BLink). & (gnl|cdd|31063 : 203.0) no description available & (reliability: 1116.0) & (original description: Putative sufD, Description = Iron-sulfur cluster assembly protein, PFAM = PF01458)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.3scaffold39203_6732-18550' '(at1g04120 : 2292.0) encodes a high-affinity inositol hexakisphosphate transporter that plays a role in guard cell signaling and phytate storage. It is a member of MRP subfamily / ABC transporter subfamily C.; multidrug resistance-associated protein 5 (MRP5); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 3 (TAIR:AT3G13080.1). & (gnl|cdd|35277 : 1542.0) no description available & (gnl|cdd|73003 : 359.0) no description available & (q6yuu5|mdr_orysa : 119.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 4584.0) & (original description: Putative ABCC5, Description = ABC transporter C family member 5, PFAM = PF00664;PF00664;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.3scaffold42935_8866-12545' '(at2g41700 : 253.0) ATP-binding cassette A1 (ABCA1); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, amino acid transmembrane transporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP-binding cassette A2 (TAIR:AT3G47730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|73022 : 174.0) no description available & (gnl|cdd|35282 : 165.0) no description available & (reliability: 506.0) & (original description: Putative abca3, Description = ATP-binding cassette sub-family A member 3, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.3scaffold43650_1-11113' '(gnl|cdd|35278 : 1531.0) no description available & (at4g18050 : 1450.0) P-glycoprotein 9 (PGP9); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 7 (TAIR:AT5G46540.1); Has 831635 Blast hits to 388928 proteins in 4153 species: Archae - 14569; Bacteria - 650940; Metazoa - 17965; Fungi - 11827; Plants - 9524; Viruses - 32; Other Eukaryotes - 126778 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 917.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (gnl|cdd|73008 : 386.0) no description available & (reliability: 2900.0) & (original description: Putative mdr, Description = MDR-like ABC transporter, PFAM = PF00664;PF00664;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.3scaffold46536_10239-16529' '(at1g15210 : 431.0) pleiotropic drug resistance 7 (PDR7); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: drug transmembrane transport; LOCATED IN: plasma membrane, chloroplast, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 and Plant PDR ABC-type transporter family protein (TAIR:AT1G59870.1); Has 383488 Blast hits to 290790 proteins in 4017 species: Archae - 7218; Bacteria - 309544; Metazoa - 9443; Fungi - 7090; Plants - 6323; Viruses - 4; Other Eukaryotes - 43866 (source: NCBI BLink). & (q5z9s8|pdr12_orysa : 413.0) Pleiotropic drug resistance protein 12 - Oryza sativa (Rice) & (gnl|cdd|35288 : 327.0) no description available & (gnl|cdd|72992 : 121.0) no description available & (reliability: 862.0) & (original description: Putative ABC1, Description = Pleiotropic drug resistance protein 1, PFAM = PF14510;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.3scaffold48568_7164-12934' '(at3g47780 : 795.0) member of ATH subfamily; ABC2 homolog 6 (ATH6); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 2 (TAIR:AT3G47740.1); Has 392088 Blast hits to 359274 proteins in 4025 species: Archae - 7301; Bacteria - 309060; Metazoa - 8340; Fungi - 5303; Plants - 5008; Viruses - 16; Other Eukaryotes - 57060 (source: NCBI BLink). & (gnl|cdd|35282 : 457.0) no description available & (gnl|cdd|73022 : 200.0) no description available & (reliability: 1590.0) & (original description: Putative BnaC01g27420D, Description = BnaC01g27420D protein, PFAM = PF13304;PF12698)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.3scaffold60497_528-9143' '(at2g36910 : 2044.0) Belongs to the family of ATP-binding cassette (ABC) transporters. Also known as AtMDR1.Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AT3G28860. PGP1 mediates cellular efflux of IAA and interacts with PIN genes that may confer an accelerated vectoral component to PGP-mediated transport. The non-polar localization of PGP1 at root and shoot apices, where IAA gradient-driven transport is impaired, may be required to confer directionality to auxin transport in those tissues.; ATP binding cassette subfamily B1 (ABCB1); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, calmodulin binding, auxin efflux transmembrane transporter activity; INVOLVED IN: in 10 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP binding cassette subfamily B19 (TAIR:AT3G28860.1); Has 825599 Blast hits to 386427 proteins in 4134 species: Archae - 14573; Bacteria - 644325; Metazoa - 17752; Fungi - 12077; Plants - 9020; Viruses - 35; Other Eukaryotes - 127817 (source: NCBI BLink). & (gnl|cdd|35278 : 1572.0) no description available & (q6yuu5|mdr_orysa : 979.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (gnl|cdd|73008 : 414.0) no description available & (reliability: 4088.0) & (original description: Putative ABCB1, Description = ABC transporter B family member 1, PFAM = PF00005;PF00005;PF00664;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.3scaffold60648_1251-10398' '(q76cu2|pdr1_tobac : 2739.0) Pleiotropic drug resistance protein 1 (NtPDR1) - Nicotiana tabacum (Common tobacco) & (at1g15520 : 2075.0) ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.; pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink). & (gnl|cdd|35288 : 1758.0) no description available & (gnl|cdd|72991 : 283.0) no description available & (reliability: 4150.0) & (original description: Putative PDR1, Description = Pleiotropic drug resistance protein 1, PFAM = PF01061;PF01061;PF00005;PF00005;PF08370;PF14510)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.3scaffold98039_851-3561' '(at3g13220 : 154.0) Encodes a ATP-binding cassette transporter G26 (ABCG26) involved in tapetal cell and pollen development. Required for male fertility and pollen exine formation.; WBC27; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G52310.1); Has 402808 Blast hits to 366123 proteins in 4145 species: Archae - 7203; Bacteria - 319822; Metazoa - 8717; Fungi - 6492; Plants - 5411; Viruses - 13; Other Eukaryotes - 55150 (source: NCBI BLink). & (gnl|cdd|35284 : 138.0) no description available & (gnl|cdd|72993 : 98.8) no description available & (reliability: 308.0) & (original description: Putative WBC14, Description = White-brown-complex ABC transporter family protein, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.3scaffold98039_863-4043' '(at3g13220 : 149.0) Encodes a ATP-binding cassette transporter G26 (ABCG26) involved in tapetal cell and pollen development. Required for male fertility and pollen exine formation.; WBC27; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G52310.1); Has 402808 Blast hits to 366123 proteins in 4145 species: Archae - 7203; Bacteria - 319822; Metazoa - 8717; Fungi - 6492; Plants - 5411; Viruses - 13; Other Eukaryotes - 55150 (source: NCBI BLink). & (gnl|cdd|35284 : 147.0) no description available & (gnl|cdd|72993 : 114.0) no description available & (reliability: 298.0) & (original description: Putative WBC9, Description = AAA+ ATPase domain-containing protein, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.5scaffold247_903530-911112' '(at3g59140 : 1399.0) member of MRP subfamily; multidrug resistance-associated protein 14 (MRP14); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 6 (TAIR:AT3G21250.2); Has 673798 Blast hits to 360971 proteins in 4075 species: Archae - 12279; Bacteria - 544381; Metazoa - 13093; Fungi - 8967; Plants - 6941; Viruses - 21; Other Eukaryotes - 88116 (source: NCBI BLink). & (gnl|cdd|35277 : 1285.0) no description available & (gnl|cdd|73003 : 341.0) no description available & (q6yuu5|mdr_orysa : 117.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 2798.0) & (original description: Putative ABCC10, Description = ABC transporter C family member 10, PFAM = PF00664;PF00664;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.5scaffold257_729357-741416' '(at1g71960 : 707.0) Encodes a plasma membrane localized ABC transporter involved in abscisic acid transport and responses.; ATP-binding casette family G25 (ABCG25); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ATP-binding cassette 14 (TAIR:AT1G31770.1); Has 400795 Blast hits to 363827 proteins in 4147 species: Archae - 6947; Bacteria - 316897; Metazoa - 8938; Fungi - 6866; Plants - 5594; Viruses - 13; Other Eukaryotes - 55540 (source: NCBI BLink). & (gnl|cdd|35284 : 455.0) no description available & (gnl|cdd|72993 : 224.0) no description available & (q7fmw4|pdr15_orysa : 190.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 1414.0) & (original description: Putative ABCG25, Description = ABC transporter G family member 25, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.5scaffold295_1065965-1078443' '(at4g25960 : 1722.0) P-glycoprotein 2 (PGP2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 10 (TAIR:AT1G10680.1); Has 857619 Blast hits to 396855 proteins in 4207 species: Archae - 14871; Bacteria - 670687; Metazoa - 17931; Fungi - 12963; Plants - 9451; Viruses - 35; Other Eukaryotes - 131681 (source: NCBI BLink). & (gnl|cdd|35278 : 1469.0) no description available & (q6yuu5|mdr_orysa : 899.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (gnl|cdd|73008 : 380.0) no description available & (reliability: 3444.0) & (original description: Putative ABCB2, Description = ABC transporter B family member 2, PFAM = PF00005;PF00005;PF00664;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.5scaffold324_210461-267661' '(at2g34660 : 1986.0) encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; multidrug resistance-associated protein 2 (MRP2); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 1 (TAIR:AT1G30400.2). & (gnl|cdd|35277 : 1463.0) no description available & (gnl|cdd|73003 : 362.0) no description available & (q6yuu5|mdr_orysa : 116.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 3972.0) & (original description: Putative ABCC2, Description = ABC transporter C family member 2, PFAM = PF00005;PF00005;PF00664;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.5scaffold379_605241-621470' '(at3g43790 : 528.0) zinc induced facilitator-like 2 (ZIFL2); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: zinc induced facilitator-like 1 (TAIR:AT5G13750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37826 : 348.0) no description available & (gnl|cdd|87335 : 94.0) no description available & (reliability: 1056.0) & (original description: Putative ZIFL1, Description = Protein ZINC INDUCED FACILITATOR-LIKE 1, PFAM = PF07690)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.5scaffold603_181492-185351' '(at1g53270 : 700.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT2G13610.1); Has 412109 Blast hits to 371848 proteins in 4161 species: Archae - 7411; Bacteria - 324065; Metazoa - 9151; Fungi - 7073; Plants - 5804; Viruses - 6; Other Eukaryotes - 58599 (source: NCBI BLink). & (gnl|cdd|35284 : 526.0) no description available & (gnl|cdd|72972 : 219.0) no description available & (q5w274|pdr3_tobac : 188.0) Pleiotropic drug resistance protein 3 (NtPDR3) - Nicotiana tabacum (Common tobacco) & (reliability: 1400.0) & (original description: Putative ABCG10, Description = ABC transporter G family member 10, PFAM = PF01061;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.5scaffold661_252304-267523' '(at1g65950 : 551.0) Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ABC2 homolog 9 (TAIR:AT2G40090.1); Has 9535 Blast hits to 9504 proteins in 1790 species: Archae - 124; Bacteria - 4369; Metazoa - 419; Fungi - 493; Plants - 742; Viruses - 14; Other Eukaryotes - 3374 (source: NCBI BLink). & (gnl|cdd|36449 : 338.0) no description available & (gnl|cdd|31005 : 254.0) no description available & (reliability: 1102.0) & (original description: Putative At1g65950, Description = Putative aarF domain-containing protein kinase 1, PFAM = PF03109)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.5scaffold690_21952-171849' '(at3g13220 : 145.0) Encodes a ATP-binding cassette transporter G26 (ABCG26) involved in tapetal cell and pollen development. Required for male fertility and pollen exine formation.; WBC27; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G52310.1); Has 402808 Blast hits to 366123 proteins in 4145 species: Archae - 7203; Bacteria - 319822; Metazoa - 8717; Fungi - 6492; Plants - 5411; Viruses - 13; Other Eukaryotes - 55150 (source: NCBI BLink). & (gnl|cdd|35284 : 130.0) no description available & (gnl|cdd|72972 : 91.4) no description available & (reliability: 290.0) & (original description: Putative WBC14, Description = ABC transporter G family member 14, PFAM = PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.5scaffold806_252550-261007' '(at5g39040 : 827.0) Encodes a member of TAP subfamily of ABC transporters that is located in the vacuole. Mutants are hypersensitive to aluminum and the gene product may be important for intracellular movement of some substrate, possibly chelated Al, as part of a mechanism of aluminum sequestration.; transporter associated with antigen processing protein 2 (TAP2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to aluminum ion; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 11 (TAIR:AT1G02520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35281 : 690.0) no description available & (gnl|cdd|31327 : 446.0) no description available & (q6yuu5|mdr_orysa : 298.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 1654.0) & (original description: Putative mrpA, Description = ATP-binding cassette sub-family B member 10, mitochondrial, PFAM = PF00664;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.5scaffold810_107270-230004' '(at1g17840 : 224.0) Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix.; white-brown complex homolog protein 11 (WBC11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, fatty acid transporter activity; INVOLVED IN: cutin transport, fatty acid transport; LOCATED IN: plasma membrane, external side of plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G21090.1); Has 367567 Blast hits to 338203 proteins in 4071 species: Archae - 6733; Bacteria - 294034; Metazoa - 7509; Fungi - 6244; Plants - 5251; Viruses - 10; Other Eukaryotes - 47786 (source: NCBI BLink). & (gnl|cdd|35284 : 181.0) no description available & (gnl|cdd|72993 : 123.0) no description available & (q8s628|pdr13_orysa : 97.8) Pleiotropic drug resistance protein 13 - Oryza sativa (Rice) & (reliability: 448.0) & (original description: Putative COF1, Description = ABC transporter G family member 11, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.5scaffold1199_28193-30757' '(q76cu2|pdr1_tobac : 243.0) Pleiotropic drug resistance protein 1 (NtPDR1) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35288 : 232.0) no description available & (at1g15520 : 228.0) ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.; pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink). & (gnl|cdd|72992 : 116.0) no description available & (reliability: 456.0) & (original description: Putative ABC1, Description = Pleiotropic drug resistance protein 1, PFAM = )' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.5scaffold1310_306056-315687' '(q76cu2|pdr1_tobac : 2370.0) Pleiotropic drug resistance protein 1 (NtPDR1) - Nicotiana tabacum (Common tobacco) & (at1g15520 : 1967.0) ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.; pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink). & (gnl|cdd|35288 : 1644.0) no description available & (gnl|cdd|72991 : 282.0) no description available & (reliability: 3934.0) & (original description: Putative NbPDR3, Description = PDR-type ACB transporter, PFAM = PF08370;PF14510;PF00005;PF00005;PF01061;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.5scaffold1355_398568-403954' '(at5g14100 : 254.0) member of NAP subfamily; non-intrinsic ABC protein 14 (NAP14); FUNCTIONS IN: transporter activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT4G33460.1); Has 403186 Blast hits to 364909 proteins in 4058 species: Archae - 7357; Bacteria - 322932; Metazoa - 7473; Fungi - 4759; Plants - 4437; Viruses - 20; Other Eukaryotes - 56208 (source: NCBI BLink). & (gnl|cdd|72984 : 155.0) no description available & (gnl|cdd|35278 : 130.0) no description available & (p56344|cysa_chlvu : 86.3) Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Chlorella vulgaris (Green alga) & (reliability: 508.0) & (original description: Putative cbiO, Description = ABC-type cobalt transport system, ATPase component, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.5scaffold1653_209872-223436' '(at3g21090 : 865.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to karrikin; LOCATED IN: membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT1G51500.1); Has 380370 Blast hits to 349027 proteins in 4089 species: Archae - 6846; Bacteria - 303738; Metazoa - 8409; Fungi - 6671; Plants - 5430; Viruses - 12; Other Eukaryotes - 49264 (source: NCBI BLink). & (gnl|cdd|35284 : 527.0) no description available & (gnl|cdd|72972 : 230.0) no description available & (q7fmw4|pdr15_orysa : 186.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 1730.0) & (original description: Putative ABCG15, Description = ABC transporter G family member 15, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.5scaffold1826_179371-189574' '(at4g25450 : 867.0) member of NAP subfamily; non-intrinsic ABC protein 8 (NAP8); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: transporter associated with antigen processing protein 2 (TAIR:AT5G39040.1); Has 420091 Blast hits to 380969 proteins in 4118 species: Archae - 7380; Bacteria - 326284; Metazoa - 9897; Fungi - 7311; Plants - 5559; Viruses - 14; Other Eukaryotes - 63646 (source: NCBI BLink). & (gnl|cdd|35281 : 455.0) no description available & (gnl|cdd|31327 : 382.0) no description available & (q6yuu5|mdr_orysa : 226.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 1734.0) & (original description: Putative ABCB28, Description = ABC transporter B family member 28, PFAM = PF00664;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.5scaffold2265_266499-278962' '(at2g26910 : 2145.0) pleiotropic drug resistance 4 (PDR4); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: drug transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 12 (TAIR:AT1G15520.1); Has 401729 Blast hits to 274780 proteins in 3990 species: Archae - 7906; Bacteria - 327119; Metazoa - 10011; Fungi - 7454; Plants - 6269; Viruses - 4; Other Eukaryotes - 42966 (source: NCBI BLink). & (q8gu87|pdr6_orysa : 1950.0) Pleiotropic drug resistance protein 6 - Oryza sativa (Rice) & (gnl|cdd|35288 : 1652.0) no description available & (gnl|cdd|72991 : 296.0) no description available & (reliability: 4290.0) & (original description: Putative ABCG32, Description = ABC transporter G family member 32, PFAM = PF00005;PF00005;PF08370;PF01061;PF01061;PF14510)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.5scaffold3019_194090-233429' '(at2g41700 : 2469.0) ATP-binding cassette A1 (ABCA1); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, amino acid transmembrane transporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP-binding cassette A2 (TAIR:AT3G47730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35282 : 382.0) no description available & (gnl|cdd|73022 : 311.0) no description available & (q9g4f5|cysa_cucsa : 93.6) Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Cucumis sativus (Cucumber) & (reliability: 4938.0) & (original description: Putative ABCA1, Description = ABC transporter A family member 1, PFAM = PF00005;PF00005;PF12698;PF12698)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.5scaffold4512_51372-74356' '(at3g47780 : 1190.0) member of ATH subfamily; ABC2 homolog 6 (ATH6); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 2 (TAIR:AT3G47740.1); Has 392088 Blast hits to 359274 proteins in 4025 species: Archae - 7301; Bacteria - 309060; Metazoa - 8340; Fungi - 5303; Plants - 5008; Viruses - 16; Other Eukaryotes - 57060 (source: NCBI BLink). & (gnl|cdd|35282 : 588.0) no description available & (gnl|cdd|73022 : 292.0) no description available & (q9mun1|cysa_mesvi : 103.0) Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Mesostigma viride & (reliability: 2380.0) & (original description: Putative ABCA7, Description = ABC transporter A family member 7, PFAM = PF00005;PF12698)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.5scaffold5058_148243-159223' '(at3g55320 : 1197.0) P-glycoprotein 20 (PGP20); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140); BEST Arabidopsis thaliana protein match is: P-glycoprotein 6 (TAIR:AT2G39480.1); Has 718468 Blast hits to 361578 proteins in 4093 species: Archae - 12537; Bacteria - 570379; Metazoa - 18035; Fungi - 12093; Plants - 8938; Viruses - 13; Other Eukaryotes - 96473 (source: NCBI BLink). & (gnl|cdd|35278 : 720.0) no description available & (q6yuu5|mdr_orysa : 408.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (gnl|cdd|31327 : 350.0) no description available & (reliability: 2394.0) & (original description: Putative mdr, Description = ATP-binding cassette transporter, PFAM = PF00664;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.5scaffold6324_72109-83927' '(at1g04120 : 2292.0) encodes a high-affinity inositol hexakisphosphate transporter that plays a role in guard cell signaling and phytate storage. It is a member of MRP subfamily / ABC transporter subfamily C.; multidrug resistance-associated protein 5 (MRP5); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 3 (TAIR:AT3G13080.1). & (gnl|cdd|35277 : 1542.0) no description available & (gnl|cdd|73003 : 359.0) no description available & (q6yuu5|mdr_orysa : 119.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 4584.0) & (original description: Putative MRP4, Description = ABC transporter C family MRP4, PFAM = PF00664;PF00664;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.5scaffold6332_91618-101318' '(at5g39040 : 820.0) Encodes a member of TAP subfamily of ABC transporters that is located in the vacuole. Mutants are hypersensitive to aluminum and the gene product may be important for intracellular movement of some substrate, possibly chelated Al, as part of a mechanism of aluminum sequestration.; transporter associated with antigen processing protein 2 (TAP2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to aluminum ion; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 11 (TAIR:AT1G02520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35281 : 658.0) no description available & (gnl|cdd|31327 : 429.0) no description available & (q6yuu5|mdr_orysa : 290.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 1640.0) & (original description: Putative ABCB9, Description = ATP-binding cassette sub-family B member 9, PFAM = PF00005;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'nbv0.5scaffold7715_49696-53870' '(at3g54540 : 989.0) member of GCN subfamily; general control non-repressible 4 (GCN4); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: general control non-repressible 3 (TAIR:AT1G64550.1); Has 605377 Blast hits to 341410 proteins in 3920 species: Archae - 11643; Bacteria - 492389; Metazoa - 10210; Fungi - 6724; Plants - 5978; Viruses - 55; Other Eukaryotes - 78378 (source: NCBI BLink). & (gnl|cdd|35289 : 537.0) no description available & (gnl|cdd|30834 : 444.0) no description available & (reliability: 1978.0) & (original description: Putative abc1, Description = ABC transporter, PFAM = PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00000183ctg003_15379-18877' '(at1g17840 : 326.0) Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix.; white-brown complex homolog protein 11 (WBC11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, fatty acid transporter activity; INVOLVED IN: cutin transport, fatty acid transport; LOCATED IN: plasma membrane, external side of plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G21090.1); Has 367567 Blast hits to 338203 proteins in 4071 species: Archae - 6733; Bacteria - 294034; Metazoa - 7509; Fungi - 6244; Plants - 5251; Viruses - 10; Other Eukaryotes - 47786 (source: NCBI BLink). & (gnl|cdd|35284 : 225.0) no description available & (gnl|cdd|85216 : 104.0) no description available & (reliability: 652.0) & (original description: Putative COF1, Description = ABC transporter G family member 11, PFAM = PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00000183ctg004_1-2030' '(at1g17840 : 263.0) Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix.; white-brown complex homolog protein 11 (WBC11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, fatty acid transporter activity; INVOLVED IN: cutin transport, fatty acid transport; LOCATED IN: plasma membrane, external side of plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G21090.1); Has 367567 Blast hits to 338203 proteins in 4071 species: Archae - 6733; Bacteria - 294034; Metazoa - 7509; Fungi - 6244; Plants - 5251; Viruses - 10; Other Eukaryotes - 47786 (source: NCBI BLink). & (gnl|cdd|35284 : 248.0) no description available & (gnl|cdd|72972 : 201.0) no description available & (q8s628|pdr13_orysa : 132.0) Pleiotropic drug resistance protein 13 - Oryza sativa (Rice) & (reliability: 526.0) & (original description: Putative COF1, Description = ABC transporter G family member 11, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00000286ctg002_1-1632' '(gnl|cdd|35284 : 99.7) no description available & (at3g21090 : 88.6) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to karrikin; LOCATED IN: membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT1G51500.1); Has 380370 Blast hits to 349027 proteins in 4089 species: Archae - 6846; Bacteria - 303738; Metazoa - 8409; Fungi - 6671; Plants - 5430; Viruses - 12; Other Eukaryotes - 49264 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative COF1, Description = ABC transporter G family member 11, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00002076ctg015_1-7586' '(q5w274|pdr3_tobac : 1603.0) Pleiotropic drug resistance protein 3 (NtPDR3) - Nicotiana tabacum (Common tobacco) & (at3g53480 : 1162.0) Negative regulator of auxin polar transport inhibitors. ABCG37 regulates auxin distribution and homeostasis in roots by excluding IBA from the root apex, but does not act directly in basipetal transport. ABCG37 and ABCG36 act redundantly at outermost root plasma membranes and, transport IBA out of the cells.; pleiotropic drug resistance 9 (PDR9); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: cellular response to indolebutyric acid stimulus, drug transmembrane transport, root development, auxin polar transport; LOCATED IN: plasma membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 5 (TAIR:AT2G37280.1); Has 430532 Blast hits to 296745 proteins in 4078 species: Archae - 8262; Bacteria - 349677; Metazoa - 9969; Fungi - 7006; Plants - 6279; Viruses - 7; Other Eukaryotes - 49332 (source: NCBI BLink). & (gnl|cdd|35288 : 997.0) no description available & (gnl|cdd|72991 : 283.0) no description available & (reliability: 2324.0) & (original description: Putative Lr34, Description = ATP-binding cassette transporter, putative, PFAM = PF01061;PF01061;PF00005;PF08370)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00002458ctg024_1-2681' '(at3g59140 : 529.0) member of MRP subfamily; multidrug resistance-associated protein 14 (MRP14); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 6 (TAIR:AT3G21250.2); Has 673798 Blast hits to 360971 proteins in 4075 species: Archae - 12279; Bacteria - 544381; Metazoa - 13093; Fungi - 8967; Plants - 6941; Viruses - 21; Other Eukaryotes - 88116 (source: NCBI BLink). & (gnl|cdd|35277 : 412.0) no description available & (gnl|cdd|73009 : 151.0) no description available & (reliability: 1058.0) & (original description: Putative MRP1, Description = ABC transporter C family member 10, PFAM = PF00005;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00002957ctg004_2342-5678' '(at4g31390 : 175.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G79600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative At4g31390, Description = Serine/Threonine kinase, ABC1 family protein, PFAM = )' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00003791ctg022_1-10960' '(at4g39850 : 1316.0) Encodes a peroxisomal protein of the ATP binding cassette (ABC) transporter class (PMP subfamily) with significant identity to the human X-linked adrenoleukodystrophy protein (ALDP). The gene product promotes germination and represses embryo dormancy. ABI3, ABA1, FUS3 and LEC1 are epistatic to this gene. Mutants accumulate fatty acyl CoA suggesting a defect in uptake of fatty acyl CoA into the peroxisome.; peroxisomal ABC transporter 1 (PXA1); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, N-terminal (InterPro:IPR010509), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT1G54350.1). & (gnl|cdd|35283 : 418.0) no description available & (gnl|cdd|87091 : 276.0) no description available & (reliability: 2632.0) & (original description: Putative pmp2, Description = ABC transporter D family member 1, PFAM = PF06472;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00004419ctg007_256-7215' '(at5g14100 : 323.0) member of NAP subfamily; non-intrinsic ABC protein 14 (NAP14); FUNCTIONS IN: transporter activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT4G33460.1); Has 403186 Blast hits to 364909 proteins in 4058 species: Archae - 7357; Bacteria - 322932; Metazoa - 7473; Fungi - 4759; Plants - 4437; Viruses - 20; Other Eukaryotes - 56208 (source: NCBI BLink). & (gnl|cdd|72984 : 191.0) no description available & (gnl|cdd|35278 : 175.0) no description available & (p56344|cysa_chlvu : 90.5) Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Chlorella vulgaris (Green alga) & (reliability: 646.0) & (original description: Putative ABCI11, Description = ABC transporter I family member 11, chloroplastic, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00004500ctg001_7165-15318' '(at3g13080 : 1031.0) encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; multidrug resistance-associated protein 3 (MRP3); FUNCTIONS IN: chlorophyll catabolite transmembrane transporter activity, ATPase activity, coupled to transmembrane movement of substances, glutathione S-conjugate-exporting ATPase activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: apoplast, vacuolar membrane, plasma membrane, plant-type vacuole; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 8 (TAIR:AT3G13090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35277 : 874.0) no description available & (gnl|cdd|73003 : 342.0) no description available & (q6yuu5|mdr_orysa : 107.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 2062.0) & (original description: Putative MRP2, Description = Multidrug resistance-associated protein 2, PFAM = PF00005;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00009142ctg006_6985-14451' '(at1g70610 : 573.0) member of TAP subfamily; transporter associated with antigen processing protein 1 (TAP1); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: transporter associated with antigen processing protein 2 (TAIR:AT5G39040.1); Has 433965 Blast hits to 389325 proteins in 4163 species: Archae - 7467; Bacteria - 334124; Metazoa - 10295; Fungi - 7727; Plants - 5683; Viruses - 22; Other Eukaryotes - 68647 (source: NCBI BLink). & (gnl|cdd|35281 : 323.0) no description available & (gnl|cdd|31327 : 169.0) no description available & (reliability: 1146.0) & (original description: Putative TAP1, Description = ABC transporter B family member 26, chloroplastic, PFAM = PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00010007ctg001_1-6007' '(at4g18050 : 426.0) P-glycoprotein 9 (PGP9); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 7 (TAIR:AT5G46540.1); Has 831635 Blast hits to 388928 proteins in 4153 species: Archae - 14569; Bacteria - 650940; Metazoa - 17965; Fungi - 11827; Plants - 9524; Viruses - 32; Other Eukaryotes - 126778 (source: NCBI BLink). & (gnl|cdd|35278 : 425.0) no description available & (q6yuu5|mdr_orysa : 259.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (gnl|cdd|31327 : 216.0) no description available & (reliability: 852.0) & (original description: Putative mdr, Description = ABC transporter B family member 4, PFAM = PF00005;PF00005;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00010201ctg003_3810-13547' '(q2pcf1|pdr2_nicpl : 2103.0) Pleiotropic drug resistance protein 2 (NpPDR2) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at2g36380 : 2081.0) pleiotropic drug resistance 6 (PDR6); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35288 : 1705.0) no description available & (gnl|cdd|72991 : 284.0) no description available & (reliability: 4162.0) & (original description: Putative ABCG34, Description = ABC transporter G family member 34, PFAM = PF01061;PF01061;PF08370;PF14510;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00011045ctg019_16441-29471' '(at2g26910 : 2078.0) pleiotropic drug resistance 4 (PDR4); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: drug transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 12 (TAIR:AT1G15520.1); Has 401729 Blast hits to 274780 proteins in 3990 species: Archae - 7906; Bacteria - 327119; Metazoa - 10011; Fungi - 7454; Plants - 6269; Viruses - 4; Other Eukaryotes - 42966 (source: NCBI BLink). & (q8gu87|pdr6_orysa : 1888.0) Pleiotropic drug resistance protein 6 - Oryza sativa (Rice) & (gnl|cdd|35288 : 1591.0) no description available & (gnl|cdd|72991 : 274.0) no description available & (reliability: 4156.0) & (original description: Putative ABCG32, Description = ABC transporter G family member 32, PFAM = PF14510;PF08370;PF01061;PF01061;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00011489ctg011_3279-7385' '(at3g54540 : 999.0) member of GCN subfamily; general control non-repressible 4 (GCN4); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: general control non-repressible 3 (TAIR:AT1G64550.1); Has 605377 Blast hits to 341410 proteins in 3920 species: Archae - 11643; Bacteria - 492389; Metazoa - 10210; Fungi - 6724; Plants - 5978; Viruses - 55; Other Eukaryotes - 78378 (source: NCBI BLink). & (gnl|cdd|35289 : 535.0) no description available & (gnl|cdd|30834 : 442.0) no description available & (reliability: 1998.0) & (original description: Putative abc1, Description = ATP-binding cassette sub-family F member 1, PFAM = PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00013523ctg004_4192-14052' '(q2pcf1|pdr2_nicpl : 2788.0) Pleiotropic drug resistance protein 2 (NpPDR2) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at2g36380 : 2062.0) pleiotropic drug resistance 6 (PDR6); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35288 : 1684.0) no description available & (gnl|cdd|72991 : 279.0) no description available & (reliability: 4124.0) & (original description: Putative PDR2, Description = Pleiotropic drug resistance protein 2, PFAM = PF08370;PF01061;PF01061;PF00005;PF00005;PF14510)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00013692ctg000_18914-29342' '(at4g31390 : 1058.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G79600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|31005 : 390.0) no description available & (gnl|cdd|36449 : 357.0) no description available & (reliability: 2116.0) & (original description: Putative aarF, Description = Putative unusual protein kinase, PFAM = PF03109)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00014361ctg008_8929-12343' '(at4g23030 : 371.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: stem, male gametophyte, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G52050.1); Has 11257 Blast hits to 11210 proteins in 2068 species: Archae - 244; Bacteria - 8067; Metazoa - 149; Fungi - 328; Plants - 1302; Viruses - 0; Other Eukaryotes - 1167 (source: NCBI BLink). & (gnl|cdd|36561 : 296.0) no description available & (gnl|cdd|30880 : 118.0) no description available & (reliability: 742.0) & (original description: Putative ABS3, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554;PF01554)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00014920ctg000_714-4530' '(at1g64550 : 215.0) member of GCN subfamily; general control non-repressible 3 (GCN3); FUNCTIONS IN: transporter activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT5G60790.1); Has 474431 Blast hits to 318649 proteins in 3825 species: Archae - 8686; Bacteria - 390426; Metazoa - 7720; Fungi - 5127; Plants - 4044; Viruses - 51; Other Eukaryotes - 58377 (source: NCBI BLink). & (gnl|cdd|35285 : 80.0) no description available & (reliability: 430.0) & (original description: Putative GCN3, Description = ABC transporter F family member 3, PFAM = )' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00014920ctg001_1-8372' '(at1g64550 : 842.0) member of GCN subfamily; general control non-repressible 3 (GCN3); FUNCTIONS IN: transporter activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT5G60790.1); Has 474431 Blast hits to 318649 proteins in 3825 species: Archae - 8686; Bacteria - 390426; Metazoa - 7720; Fungi - 5127; Plants - 4044; Viruses - 51; Other Eukaryotes - 58377 (source: NCBI BLink). & (gnl|cdd|35285 : 594.0) no description available & (gnl|cdd|30834 : 449.0) no description available & (reliability: 1684.0) & (original description: Putative ABCF3, Description = ATP-binding cassette, subfamily F, member 3, PFAM = PF12848;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00015234ctg010_1-3425' '(at2g07680 : 249.0) member of MRP subfamily; multidrug resistance-associated protein 11 (MRP11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 2 (TAIR:AT2G34660.2); Has 539195 Blast hits to 324792 proteins in 3896 species: Archae - 9326; Bacteria - 437824; Metazoa - 12258; Fungi - 6863; Plants - 5577; Viruses - 6; Other Eukaryotes - 67341 (source: NCBI BLink). & (gnl|cdd|35277 : 191.0) no description available & (reliability: 498.0) & (original description: Putative MRP1, Description = Multidrug resistance-associated protein 7, PFAM = PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00015234ctg012_4039-12698' '(at2g07680 : 640.0) member of MRP subfamily; multidrug resistance-associated protein 11 (MRP11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 2 (TAIR:AT2G34660.2); Has 539195 Blast hits to 324792 proteins in 3896 species: Archae - 9326; Bacteria - 437824; Metazoa - 12258; Fungi - 6863; Plants - 5577; Viruses - 6; Other Eukaryotes - 67341 (source: NCBI BLink). & (gnl|cdd|35277 : 502.0) no description available & (gnl|cdd|73009 : 292.0) no description available & (reliability: 1280.0) & (original description: Putative MRP1, Description = Multidrug resistance-associated protein 7, PFAM = PF00005;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00015234ctg013_1024-5265' '(at2g07680 : 128.0) member of MRP subfamily; multidrug resistance-associated protein 11 (MRP11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 2 (TAIR:AT2G34660.2); Has 539195 Blast hits to 324792 proteins in 3896 species: Archae - 9326; Bacteria - 437824; Metazoa - 12258; Fungi - 6863; Plants - 5577; Viruses - 6; Other Eukaryotes - 67341 (source: NCBI BLink). & (gnl|cdd|35277 : 81.1) no description available & (reliability: 256.0) & (original description: Putative MRP1, Description = ABC transporter C family member 13, PFAM = )' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00015951ctg005_1-6646' '(at1g51460 : 459.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G21090.1); Has 379847 Blast hits to 348933 proteins in 4101 species: Archae - 6887; Bacteria - 304547; Metazoa - 7636; Fungi - 6582; Plants - 5428; Viruses - 18; Other Eukaryotes - 48749 (source: NCBI BLink). & (gnl|cdd|35284 : 209.0) no description available & (gnl|cdd|85216 : 95.0) no description available & (reliability: 918.0) & (original description: Putative CER5, Description = ABC transporter G family member 15, PFAM = PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00016100ctg001_22635-34332' '(at5g60740 : 1452.0) ABC transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: non-intrinsic ABC protein 12 (TAIR:AT2G37010.1); Has 368280 Blast hits to 339015 proteins in 4019 species: Archae - 6650; Bacteria - 293315; Metazoa - 9188; Fungi - 6366; Plants - 5378; Viruses - 18; Other Eukaryotes - 47365 (source: NCBI BLink). & (gnl|cdd|35284 : 385.0) no description available & (gnl|cdd|72972 : 246.0) no description available & (q8gu92|pdr2_orysa : 173.0) Probable pleiotropic drug resistance protein 2 - Oryza sativa (Rice) & (reliability: 2904.0) & (original description: Putative ABCG28, Description = ABC transporter G family member 28, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00017649ctg002_1-7902' '(gnl|cdd|35277 : 1289.0) no description available & (at3g13080 : 1194.0) encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; multidrug resistance-associated protein 3 (MRP3); FUNCTIONS IN: chlorophyll catabolite transmembrane transporter activity, ATPase activity, coupled to transmembrane movement of substances, glutathione S-conjugate-exporting ATPase activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: apoplast, vacuolar membrane, plasma membrane, plant-type vacuole; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 8 (TAIR:AT3G13090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|73003 : 346.0) no description available & (q6yuu5|mdr_orysa : 145.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 2388.0) & (original description: Putative mrp2, Description = MRP-like ABC transporter, PFAM = PF00005;PF00005;PF00664;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00017690ctg014_1164-2512' '(q76cu2|pdr1_tobac : 180.0) Pleiotropic drug resistance protein 1 (NtPDR1) - Nicotiana tabacum (Common tobacco) & (at1g15520 : 116.0) ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.; pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative ABC1, Description = Pleiotropic drug resistance protein 1, PFAM = )' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00018609ctg000_3225-10104' '(at5g39040 : 573.0) Encodes a member of TAP subfamily of ABC transporters that is located in the vacuole. Mutants are hypersensitive to aluminum and the gene product may be important for intracellular movement of some substrate, possibly chelated Al, as part of a mechanism of aluminum sequestration.; transporter associated with antigen processing protein 2 (TAP2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to aluminum ion; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 11 (TAIR:AT1G02520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35281 : 437.0) no description available & (gnl|cdd|31327 : 256.0) no description available & (q6yuu5|mdr_orysa : 137.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 1146.0) & (original description: Putative msbA2, Description = ABC transporter B family member 25, PFAM = PF00005;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00024104ctg010_1634-5970' '(at5g19410 : 687.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT5G52860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35284 : 500.0) no description available & (gnl|cdd|31326 : 195.0) no description available & (q8gu86|pdr5_orysa : 168.0) Pleiotropic drug resistance protein 5 - Oryza sativa (Rice) & (reliability: 1374.0) & (original description: Putative ABCG23, Description = ABC transporter G family member 23, PFAM = PF01061;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00024914ctg007_25366-30789' '(at1g17840 : 582.0) Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix.; white-brown complex homolog protein 11 (WBC11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, fatty acid transporter activity; INVOLVED IN: cutin transport, fatty acid transport; LOCATED IN: plasma membrane, external side of plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G21090.1); Has 367567 Blast hits to 338203 proteins in 4071 species: Archae - 6733; Bacteria - 294034; Metazoa - 7509; Fungi - 6244; Plants - 5251; Viruses - 10; Other Eukaryotes - 47786 (source: NCBI BLink). & (gnl|cdd|35284 : 481.0) no description available & (gnl|cdd|72972 : 209.0) no description available & (q76cu2|pdr1_tobac : 176.0) Pleiotropic drug resistance protein 1 (NtPDR1) - Nicotiana tabacum (Common tobacco) & (reliability: 1164.0) & (original description: Putative Dk98, Description = ABC transporter, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00025959ctg015_430-8257' '(at2g47800 : 1824.0) Encodes a plasma membrane localized ATPase transporter involved in multidrug transport. The expression of this gene is upregulated by herbicide safeners such as benoxacor, fluxofenim and fenclorim.; multidrug resistance-associated protein 4 (MRP4); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, folic acid transporter activity; INVOLVED IN: response to water deprivation, drug transmembrane transport, response to wounding, response to nematode, stomatal movement; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 10 (TAIR:AT3G62700.1); Has 714857 Blast hits to 368077 proteins in 3991 species: Archae - 12925; Bacteria - 579268; Metazoa - 12980; Fungi - 8565; Plants - 6599; Viruses - 19; Other Eukaryotes - 94501 (source: NCBI BLink). & (gnl|cdd|35277 : 1467.0) no description available & (gnl|cdd|73003 : 366.0) no description available & (q6yuu5|mdr_orysa : 140.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 3648.0) & (original description: Putative ABCC14, Description = ABC transporter C family member 14, PFAM = PF00005;PF00005;PF00664;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00026772ctg025_14665-23376' '(at1g02520 : 731.0) P-glycoprotein 11 (PGP11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 12 (TAIR:AT1G02530.1); Has 844961 Blast hits to 391444 proteins in 4162 species: Archae - 14749; Bacteria - 659839; Metazoa - 18308; Fungi - 13140; Plants - 9783; Viruses - 35; Other Eukaryotes - 129107 (source: NCBI BLink). & (gnl|cdd|35278 : 731.0) no description available & (q6yuu5|mdr_orysa : 474.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (gnl|cdd|31327 : 387.0) no description available & (reliability: 1462.0) & (original description: Putative mdr, Description = ABC transporter B family member 4, PFAM = PF00664;PF00664;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00029362ctg002_1-4705' '(at1g17840 : 1137.0) Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix.; white-brown complex homolog protein 11 (WBC11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, fatty acid transporter activity; INVOLVED IN: cutin transport, fatty acid transport; LOCATED IN: plasma membrane, external side of plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G21090.1); Has 367567 Blast hits to 338203 proteins in 4071 species: Archae - 6733; Bacteria - 294034; Metazoa - 7509; Fungi - 6244; Plants - 5251; Viruses - 10; Other Eukaryotes - 47786 (source: NCBI BLink). & (gnl|cdd|35284 : 538.0) no description available & (gnl|cdd|72972 : 227.0) no description available & (q7fmw4|pdr15_orysa : 188.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 2274.0) & (original description: Putative ABCG11, Description = ABC transporter G family member 11, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00029519ctg001_27954-40749' '(at4g25960 : 1766.0) P-glycoprotein 2 (PGP2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 10 (TAIR:AT1G10680.1); Has 857619 Blast hits to 396855 proteins in 4207 species: Archae - 14871; Bacteria - 670687; Metazoa - 17931; Fungi - 12963; Plants - 9451; Viruses - 35; Other Eukaryotes - 131681 (source: NCBI BLink). & (gnl|cdd|35278 : 1497.0) no description available & (q6yuu5|mdr_orysa : 922.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (gnl|cdd|73008 : 380.0) no description available & (reliability: 3532.0) & (original description: Putative ABCB2, Description = ABC transporter B family member 2, PFAM = PF00664;PF00664;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00035693ctg003_26124-37166' '(at1g30400 : 416.0) glutathione S-conjugate transporting ATPase (AtMRP1) mRNA. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 1 (ATMRP1); FUNCTIONS IN: xenobiotic-transporting ATPase activity, ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to cyclopentenone; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 2 (TAIR:AT2G34660.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35277 : 138.0) no description available & (reliability: 832.0) & (original description: Putative BnaA07g07330D, Description = BnaA07g07330D protein, PFAM = )' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00039842ctg010_637-7406' '(at2g36910 : 1008.0) Belongs to the family of ATP-binding cassette (ABC) transporters. Also known as AtMDR1.Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AT3G28860. PGP1 mediates cellular efflux of IAA and interacts with PIN genes that may confer an accelerated vectoral component to PGP-mediated transport. The non-polar localization of PGP1 at root and shoot apices, where IAA gradient-driven transport is impaired, may be required to confer directionality to auxin transport in those tissues.; ATP binding cassette subfamily B1 (ABCB1); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, calmodulin binding, auxin efflux transmembrane transporter activity; INVOLVED IN: in 10 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP binding cassette subfamily B19 (TAIR:AT3G28860.1); Has 825599 Blast hits to 386427 proteins in 4134 species: Archae - 14573; Bacteria - 644325; Metazoa - 17752; Fungi - 12077; Plants - 9020; Viruses - 35; Other Eukaryotes - 127817 (source: NCBI BLink). & (gnl|cdd|35278 : 786.0) no description available & (q6yuu5|mdr_orysa : 496.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (gnl|cdd|73008 : 416.0) no description available & (reliability: 2016.0) & (original description: Putative mdr, Description = ATP-binding cassette transporter, PFAM = PF00005;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00043163ctg003_582-3411' '(at4g23030 : 543.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: stem, male gametophyte, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G52050.1); Has 11257 Blast hits to 11210 proteins in 2068 species: Archae - 244; Bacteria - 8067; Metazoa - 149; Fungi - 328; Plants - 1302; Viruses - 0; Other Eukaryotes - 1167 (source: NCBI BLink). & (gnl|cdd|36561 : 397.0) no description available & (gnl|cdd|30880 : 182.0) no description available & (reliability: 1086.0) & (original description: Putative DTX49, Description = Protein DETOXIFICATION 49, PFAM = PF01554;PF01554)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00044226ctg005_42631-46703' '(at5g19410 : 689.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT5G52860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35284 : 504.0) no description available & (gnl|cdd|72993 : 194.0) no description available & (q8gu86|pdr5_orysa : 166.0) Pleiotropic drug resistance protein 5 - Oryza sativa (Rice) & (reliability: 1378.0) & (original description: Putative ABCG23, Description = ABC transporter G family member 23, PFAM = PF01061;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00047837ctg001_8343-20677' '(at2g26910 : 1979.0) pleiotropic drug resistance 4 (PDR4); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: drug transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 12 (TAIR:AT1G15520.1); Has 401729 Blast hits to 274780 proteins in 3990 species: Archae - 7906; Bacteria - 327119; Metazoa - 10011; Fungi - 7454; Plants - 6269; Viruses - 4; Other Eukaryotes - 42966 (source: NCBI BLink). & (q8gu87|pdr6_orysa : 1879.0) Pleiotropic drug resistance protein 6 - Oryza sativa (Rice) & (gnl|cdd|35288 : 1574.0) no description available & (gnl|cdd|72991 : 293.0) no description available & (reliability: 3958.0) & (original description: Putative ABCG32, Description = ABC transporter G family member 32, PFAM = PF00005;PF00005;PF08370;PF01061;PF01061;PF14510)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00050152ctg010_8060-16359' '(at4g38380 : 493.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G38330.1); Has 13476 Blast hits to 13444 proteins in 2154 species: Archae - 331; Bacteria - 10835; Metazoa - 81; Fungi - 150; Plants - 389; Viruses - 0; Other Eukaryotes - 1690 (source: NCBI BLink). & (gnl|cdd|30880 : 162.0) no description available & (gnl|cdd|36561 : 123.0) no description available & (reliability: 986.0) & (original description: Putative DTX45, Description = Protein DETOXIFICATION 45, chloroplastic, PFAM = PF01554;PF01554)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00054521ctg002_8465-12025' '(at4g23030 : 506.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: stem, male gametophyte, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G52050.1); Has 11257 Blast hits to 11210 proteins in 2068 species: Archae - 244; Bacteria - 8067; Metazoa - 149; Fungi - 328; Plants - 1302; Viruses - 0; Other Eukaryotes - 1167 (source: NCBI BLink). & (gnl|cdd|36561 : 389.0) no description available & (gnl|cdd|30880 : 179.0) no description available & (reliability: 1012.0) & (original description: Putative DTX49, Description = Protein DETOXIFICATION 49, PFAM = PF01554;PF01554)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00056239ctg004_1-4395' '(at1g17840 : 593.0) Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix.; white-brown complex homolog protein 11 (WBC11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, fatty acid transporter activity; INVOLVED IN: cutin transport, fatty acid transport; LOCATED IN: plasma membrane, external side of plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G21090.1); Has 367567 Blast hits to 338203 proteins in 4071 species: Archae - 6733; Bacteria - 294034; Metazoa - 7509; Fungi - 6244; Plants - 5251; Viruses - 10; Other Eukaryotes - 47786 (source: NCBI BLink). & (gnl|cdd|35284 : 477.0) no description available & (gnl|cdd|72972 : 209.0) no description available & (q76cu2|pdr1_tobac : 174.0) Pleiotropic drug resistance protein 1 (NtPDR1) - Nicotiana tabacum (Common tobacco) & (reliability: 1186.0) & (original description: Putative ABCG11, Description = ABC transporter G family member 11, PFAM = PF01061;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00059113ctg000_1-2954' '(at3g28860 : 404.0) Belongs to the family of ATP-binding cassette (ABC) transporters. Also known as AtMDR11 and PGP19. Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Acts upstream of phyA in regulating hypocotyl elongation and gravitropic response. Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AtPGP1.; ATP binding cassette subfamily B19 (ABCB19); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, auxin efflux transmembrane transporter activity; INVOLVED IN: in 14 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP binding cassette subfamily B1 (TAIR:AT2G36910.1); Has 832220 Blast hits to 388750 proteins in 4155 species: Archae - 14331; Bacteria - 653917; Metazoa - 17455; Fungi - 11958; Plants - 9253; Viruses - 33; Other Eukaryotes - 125273 (source: NCBI BLink). & (gnl|cdd|35278 : 263.0) no description available & (q6yuu5|mdr_orysa : 134.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (gnl|cdd|84936 : 81.1) no description available & (reliability: 808.0) & (original description: Putative mdr, Description = Multidrug resistance protein 1, 2, putative, PFAM = PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00059113ctg001_1-6949' '(at3g28860 : 1618.0) Belongs to the family of ATP-binding cassette (ABC) transporters. Also known as AtMDR11 and PGP19. Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Acts upstream of phyA in regulating hypocotyl elongation and gravitropic response. Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AtPGP1.; ATP binding cassette subfamily B19 (ABCB19); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, auxin efflux transmembrane transporter activity; INVOLVED IN: in 14 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP binding cassette subfamily B1 (TAIR:AT2G36910.1); Has 832220 Blast hits to 388750 proteins in 4155 species: Archae - 14331; Bacteria - 653917; Metazoa - 17455; Fungi - 11958; Plants - 9253; Viruses - 33; Other Eukaryotes - 125273 (source: NCBI BLink). & (gnl|cdd|35278 : 1303.0) no description available & (q6yuu5|mdr_orysa : 850.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (gnl|cdd|73008 : 405.0) no description available & (reliability: 3236.0) & (original description: Putative pgp1, Description = ABC transporter B family protein, PFAM = PF00664;PF00664;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00059737ctg000_1487-10463' '(at2g28070 : 1060.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: white-brown complex homolog protein 11 (TAIR:AT1G17840.1); Has 248098 Blast hits to 239858 proteins in 3812 species: Archae - 4857; Bacteria - 200822; Metazoa - 5202; Fungi - 4273; Plants - 3947; Viruses - 6; Other Eukaryotes - 28991 (source: NCBI BLink). & (gnl|cdd|35284 : 389.0) no description available & (gnl|cdd|72972 : 210.0) no description available & (q7fmw4|pdr15_orysa : 121.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 2120.0) & (original description: Putative ABCG3, Description = ABC transporter G family member 3, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben044scf00060900ctg002_614-2923' '(at2g34660 : 121.0) encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; multidrug resistance-associated protein 2 (MRP2); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 1 (TAIR:AT1G30400.2). & (reliability: 242.0) & (original description: Putative EST1, Description = Multidrug resistance-associated protein 13, PFAM = )' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101ctg16032_1-6435' '(at2g38510 : 535.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G58340.1); Has 11945 Blast hits to 11897 proteins in 2040 species: Archae - 292; Bacteria - 8615; Metazoa - 143; Fungi - 328; Plants - 1321; Viruses - 0; Other Eukaryotes - 1246 (source: NCBI BLink). & (gnl|cdd|36561 : 341.0) no description available & (gnl|cdd|30880 : 170.0) no description available & (reliability: 1070.0) & (original description: Putative DTX53, Description = Protein DETOXIFICATION 53, PFAM = PF01554;PF01554)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf00072_754083-765666' '(at1g65410 : 481.0) Encodes a member of NAP subfamily of transporters. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.; non-intrinsic ABC protein 11 (NAP11); FUNCTIONS IN: transporter activity, ATPase activity; INVOLVED IN: lipid transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: non-intrinsic ABC protein 3 (TAIR:AT1G67940.1); Has 424474 Blast hits to 380294 proteins in 4085 species: Archae - 7338; Bacteria - 330543; Metazoa - 9238; Fungi - 6335; Plants - 5254; Viruses - 18; Other Eukaryotes - 65748 (source: NCBI BLink). & (gnl|cdd|73020 : 316.0) no description available & (gnl|cdd|35278 : 200.0) no description available & (q9g4f5|cysa_cucsa : 140.0) Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Cucumis sativus (Cucumber) & (reliability: 962.0) & (original description: Putative TGD3, Description = Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf00312_137186-143660' '(at3g25620 : 806.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ATP-binding cassette 14 (TAIR:AT1G31770.1). & (gnl|cdd|35284 : 544.0) no description available & (gnl|cdd|72993 : 239.0) no description available & (q8gu89|pdr4_orysa : 201.0) Pleiotropic drug resistance protein 4 - Oryza sativa (Rice) & (reliability: 1612.0) & (original description: Putative ABCG21, Description = ABC transporter G family member 21, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf00332_1269370-1274838' '(at5g02270 : 494.0) member of NAP subfamily; non-intrinsic ABC protein 9 (NAP9); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G03905.1). & (gnl|cdd|37566 : 408.0) no description available & (gnl|cdd|34224 : 177.0) no description available & (reliability: 988.0) & (original description: Putative ABCI20, Description = ABC transporter I family member 20, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf00338_682528-688005' '(at1g17840 : 1135.0) Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix.; white-brown complex homolog protein 11 (WBC11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, fatty acid transporter activity; INVOLVED IN: cutin transport, fatty acid transport; LOCATED IN: plasma membrane, external side of plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G21090.1); Has 367567 Blast hits to 338203 proteins in 4071 species: Archae - 6733; Bacteria - 294034; Metazoa - 7509; Fungi - 6244; Plants - 5251; Viruses - 10; Other Eukaryotes - 47786 (source: NCBI BLink). & (gnl|cdd|35284 : 542.0) no description available & (gnl|cdd|72972 : 228.0) no description available & (q7fmw4|pdr15_orysa : 189.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 2270.0) & (original description: Putative ABCG11, Description = ABC transporter G family member 11, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf00402_394362-430726' '(q5w274|pdr3_tobac : 2789.0) Pleiotropic drug resistance protein 3 (NtPDR3) - Nicotiana tabacum (Common tobacco) & (at3g53480 : 2038.0) Negative regulator of auxin polar transport inhibitors. ABCG37 regulates auxin distribution and homeostasis in roots by excluding IBA from the root apex, but does not act directly in basipetal transport. ABCG37 and ABCG36 act redundantly at outermost root plasma membranes and, transport IBA out of the cells.; pleiotropic drug resistance 9 (PDR9); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: cellular response to indolebutyric acid stimulus, drug transmembrane transport, root development, auxin polar transport; LOCATED IN: plasma membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 5 (TAIR:AT2G37280.1); Has 430532 Blast hits to 296745 proteins in 4078 species: Archae - 8262; Bacteria - 349677; Metazoa - 9969; Fungi - 7006; Plants - 6279; Viruses - 7; Other Eukaryotes - 49332 (source: NCBI BLink). & (gnl|cdd|35288 : 1679.0) no description available & (gnl|cdd|72991 : 283.0) no description available & (reliability: 4076.0) & (original description: Putative PDR3, Description = Pleiotropic drug resistance protein 3, PFAM = PF01061;PF01061;PF00005;PF00005;PF14510;PF08370)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf00449_305638-318639' '(at3g55320 : 2176.0) P-glycoprotein 20 (PGP20); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140); BEST Arabidopsis thaliana protein match is: P-glycoprotein 6 (TAIR:AT2G39480.1); Has 718468 Blast hits to 361578 proteins in 4093 species: Archae - 12537; Bacteria - 570379; Metazoa - 18035; Fungi - 12093; Plants - 8938; Viruses - 13; Other Eukaryotes - 96473 (source: NCBI BLink). & (gnl|cdd|35278 : 775.0) no description available & (q6yuu5|mdr_orysa : 407.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (gnl|cdd|31327 : 362.0) no description available & (reliability: 4352.0) & (original description: Putative ABCB6, Description = ABC transporter B family member 6, PFAM = PF00005;PF00005;PF00664;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf00541_10152-24047' '(at1g71960 : 748.0) Encodes a plasma membrane localized ABC transporter involved in abscisic acid transport and responses.; ATP-binding casette family G25 (ABCG25); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ATP-binding cassette 14 (TAIR:AT1G31770.1); Has 400795 Blast hits to 363827 proteins in 4147 species: Archae - 6947; Bacteria - 316897; Metazoa - 8938; Fungi - 6866; Plants - 5594; Viruses - 13; Other Eukaryotes - 55540 (source: NCBI BLink). & (gnl|cdd|35284 : 455.0) no description available & (gnl|cdd|72993 : 222.0) no description available & (q7fmw4|pdr15_orysa : 183.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 1496.0) & (original description: Putative ABCG25, Description = ABC transporter G family member 25, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf00627_342324-345883' '(at4g23030 : 539.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: stem, male gametophyte, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G52050.1); Has 11257 Blast hits to 11210 proteins in 2068 species: Archae - 244; Bacteria - 8067; Metazoa - 149; Fungi - 328; Plants - 1302; Viruses - 0; Other Eukaryotes - 1167 (source: NCBI BLink). & (gnl|cdd|36561 : 393.0) no description available & (gnl|cdd|30880 : 188.0) no description available & (reliability: 1078.0) & (original description: Putative DTX49, Description = Protein DETOXIFICATION 49, PFAM = PF01554;PF01554)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf00691_264064-266750' '(at1g63270 : 358.0) Encodes a member of a heterogenous group of non-intrinsic ATP-binding cassette (ABC) proteins. Members of this group bear no close resemblance to each other nor to representatives of specific ABC protein subfamilies from other organisms. This grouping is arbitrary and will likely change upon acquisition of further data.; non-intrinsic ABC protein 10 (NAP10); FUNCTIONS IN: transporter activity; INVOLVED IN: transport; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, haem export, CcmA (InterPro:IPR005895); BEST Arabidopsis thaliana protein match is: non-intrinsic ABC protein 3 (TAIR:AT1G67940.1); Has 360446 Blast hits to 338127 proteins in 3858 species: Archae - 6408; Bacteria - 294085; Metazoa - 7445; Fungi - 3734; Plants - 4292; Viruses - 13; Other Eukaryotes - 44469 (source: NCBI BLink). & (gnl|cdd|33889 : 170.0) no description available & (gnl|cdd|35282 : 163.0) no description available & (p56344|cysa_chlvu : 84.3) Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Chlorella vulgaris (Green alga) & (reliability: 716.0) & (original description: Putative ABCI1, Description = ABC transporter I family member 1, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf00783_206200-212955' '(at1g17840 : 659.0) Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix.; white-brown complex homolog protein 11 (WBC11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, fatty acid transporter activity; INVOLVED IN: cutin transport, fatty acid transport; LOCATED IN: plasma membrane, external side of plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G21090.1); Has 367567 Blast hits to 338203 proteins in 4071 species: Archae - 6733; Bacteria - 294034; Metazoa - 7509; Fungi - 6244; Plants - 5251; Viruses - 10; Other Eukaryotes - 47786 (source: NCBI BLink). & (gnl|cdd|35284 : 509.0) no description available & (gnl|cdd|72993 : 228.0) no description available & (q5w274|pdr3_tobac : 198.0) Pleiotropic drug resistance protein 3 (NtPDR3) - Nicotiana tabacum (Common tobacco) & (reliability: 1318.0) & (original description: Putative ABCG11, Description = ABC transporter G family member 11, PFAM = PF01061;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf00820_862553-876058' '(at1g17840 : 630.0) Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix.; white-brown complex homolog protein 11 (WBC11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, fatty acid transporter activity; INVOLVED IN: cutin transport, fatty acid transport; LOCATED IN: plasma membrane, external side of plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G21090.1); Has 367567 Blast hits to 338203 proteins in 4071 species: Archae - 6733; Bacteria - 294034; Metazoa - 7509; Fungi - 6244; Plants - 5251; Viruses - 10; Other Eukaryotes - 47786 (source: NCBI BLink). & (gnl|cdd|35284 : 485.0) no description available & (gnl|cdd|72972 : 214.0) no description available & (q5w274|pdr3_tobac : 181.0) Pleiotropic drug resistance protein 3 (NtPDR3) - Nicotiana tabacum (Common tobacco) & (reliability: 1260.0) & (original description: Putative SmABCG41, Description = ATP-binding cassette transporter, PFAM = PF01061;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf00825_498240-506527' '(at4g18050 : 1615.0) P-glycoprotein 9 (PGP9); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 7 (TAIR:AT5G46540.1); Has 831635 Blast hits to 388928 proteins in 4153 species: Archae - 14569; Bacteria - 650940; Metazoa - 17965; Fungi - 11827; Plants - 9524; Viruses - 32; Other Eukaryotes - 126778 (source: NCBI BLink). & (gnl|cdd|35278 : 1585.0) no description available & (q6yuu5|mdr_orysa : 916.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (gnl|cdd|31327 : 384.0) no description available & (reliability: 3230.0) & (original description: Putative ABCB9, Description = ABC transporter B family member 9, PFAM = PF00005;PF00005;PF00664;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf00839_134522-138081' '(at1g58340 : 429.0) ZF14; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to nematode; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G29140.1); Has 10543 Blast hits to 10463 proteins in 2002 species: Archae - 229; Bacteria - 7598; Metazoa - 148; Fungi - 324; Plants - 1321; Viruses - 0; Other Eukaryotes - 923 (source: NCBI BLink). & (gnl|cdd|36561 : 353.0) no description available & (gnl|cdd|30880 : 176.0) no description available & (reliability: 834.0) & (original description: Putative PGSC0003DMG401015781, Description = Protein DETOXIFICATION, PFAM = PF01554;PF01554)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf00861_262483-273338' '(at5g06530 : 996.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G52310.1); Has 401964 Blast hits to 364471 proteins in 4136 species: Archae - 7187; Bacteria - 315702; Metazoa - 9377; Fungi - 6648; Plants - 5639; Viruses - 7; Other Eukaryotes - 57404 (source: NCBI BLink). & (gnl|cdd|35284 : 519.0) no description available & (gnl|cdd|72993 : 226.0) no description available & (q7fmw4|pdr15_orysa : 171.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 1992.0) & (original description: Putative WBC9, Description = White-brown-complex ABC transporter family protein, PFAM = PF01061;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf00956_8720-17892' '(at2g28070 : 1026.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: white-brown complex homolog protein 11 (TAIR:AT1G17840.1); Has 248098 Blast hits to 239858 proteins in 3812 species: Archae - 4857; Bacteria - 200822; Metazoa - 5202; Fungi - 4273; Plants - 3947; Viruses - 6; Other Eukaryotes - 28991 (source: NCBI BLink). & (gnl|cdd|35284 : 371.0) no description available & (gnl|cdd|72972 : 211.0) no description available & (q7fmw4|pdr15_orysa : 121.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 2052.0) & (original description: Putative BnaA04g16210D, Description = BnaA04g16210D protein, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf00982_374643-393577' '(at3g47730 : 1028.0) member of ATH subfamily; ATP-binding cassette A2 (ABCA2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 11 (TAIR:AT5G61730.1); Has 380556 Blast hits to 352092 proteins in 4023 species: Archae - 7135; Bacteria - 302205; Metazoa - 7915; Fungi - 4655; Plants - 4588; Viruses - 7; Other Eukaryotes - 54051 (source: NCBI BLink). & (gnl|cdd|35282 : 442.0) no description available & (gnl|cdd|73022 : 285.0) no description available & (q9g4f5|cysa_cucsa : 87.0) Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Cucumis sativus (Cucumber) & (reliability: 2056.0) & (original description: Putative ABCA2, Description = ABC transporter A family member 2, PFAM = PF12698;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf00982_394864-404588' '(at3g47780 : 940.0) member of ATH subfamily; ABC2 homolog 6 (ATH6); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 2 (TAIR:AT3G47740.1); Has 392088 Blast hits to 359274 proteins in 4025 species: Archae - 7301; Bacteria - 309060; Metazoa - 8340; Fungi - 5303; Plants - 5008; Viruses - 16; Other Eukaryotes - 57060 (source: NCBI BLink). & (gnl|cdd|35282 : 544.0) no description available & (gnl|cdd|73022 : 292.0) no description available & (p56344|cysa_chlvu : 91.7) Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Chlorella vulgaris (Green alga) & (reliability: 1880.0) & (original description: Putative ABCA12, Description = ABC transporter A family member 12, PFAM = PF12698;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf00982_395611-399366' '(at3g47790 : 124.0) member of ATH subfamily; ABC2 homolog 7 (ATH7); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: N-terminal protein myristoylation; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 2 (TAIR:AT3G47740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative , Description = ABC2 isoform 4, PFAM = )' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf00982_398331-404676' '(at3g47790 : 597.0) member of ATH subfamily; ABC2 homolog 7 (ATH7); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: N-terminal protein myristoylation; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 2 (TAIR:AT3G47740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35282 : 385.0) no description available & (gnl|cdd|73022 : 285.0) no description available & (p56344|cysa_chlvu : 92.0) Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Chlorella vulgaris (Green alga) & (reliability: 1194.0) & (original description: Putative ATH2, Description = ABC transporter A family member 7, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01005_345050-683424' '(at1g17840 : 214.0) Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix.; white-brown complex homolog protein 11 (WBC11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, fatty acid transporter activity; INVOLVED IN: cutin transport, fatty acid transport; LOCATED IN: plasma membrane, external side of plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G21090.1); Has 367567 Blast hits to 338203 proteins in 4071 species: Archae - 6733; Bacteria - 294034; Metazoa - 7509; Fungi - 6244; Plants - 5251; Viruses - 10; Other Eukaryotes - 47786 (source: NCBI BLink). & (gnl|cdd|35284 : 189.0) no description available & (gnl|cdd|72993 : 129.0) no description available & (q8s628|pdr13_orysa : 85.9) Pleiotropic drug resistance protein 13 - Oryza sativa (Rice) & (reliability: 428.0) & (original description: Putative COF1, Description = ABC transporter G family member 11, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01005_786372-798980' '(at1g17840 : 568.0) Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix.; white-brown complex homolog protein 11 (WBC11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, fatty acid transporter activity; INVOLVED IN: cutin transport, fatty acid transport; LOCATED IN: plasma membrane, external side of plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G21090.1); Has 367567 Blast hits to 338203 proteins in 4071 species: Archae - 6733; Bacteria - 294034; Metazoa - 7509; Fungi - 6244; Plants - 5251; Viruses - 10; Other Eukaryotes - 47786 (source: NCBI BLink). & (gnl|cdd|35284 : 476.0) no description available & (gnl|cdd|72972 : 208.0) no description available & (q5w274|pdr3_tobac : 181.0) Pleiotropic drug resistance protein 3 (NtPDR3) - Nicotiana tabacum (Common tobacco) & (reliability: 1136.0) & (original description: Putative COF1, Description = ABC transporter G family member 11, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01009_289771-293996' '(at2g37360 : 887.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport; LOCATED IN: membrane; EXPRESSED IN: petal, hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Pigment precursor permease (InterPro:IPR005284), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G53510.1); Has 392085 Blast hits to 356271 proteins in 4132 species: Archae - 6993; Bacteria - 312114; Metazoa - 8789; Fungi - 6117; Plants - 5602; Viruses - 12; Other Eukaryotes - 52458 (source: NCBI BLink). & (gnl|cdd|35284 : 563.0) no description available & (gnl|cdd|72993 : 214.0) no description available & (q8gu86|pdr5_orysa : 187.0) Pleiotropic drug resistance protein 5 - Oryza sativa (Rice) & (reliability: 1774.0) & (original description: Putative ABCG2, Description = ABC transporter G family member 2, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01036_69828-75640' '(at4g27420 : 708.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: membrane; EXPRESSED IN: petal, leaf whorl, sepal, flower, egg cell; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 389492 Blast hits to 355855 proteins in 4126 species: Archae - 7031; Bacteria - 309319; Metazoa - 8330; Fungi - 6395; Plants - 5225; Viruses - 7; Other Eukaryotes - 53185 (source: NCBI BLink). & (gnl|cdd|35284 : 519.0) no description available & (gnl|cdd|72972 : 223.0) no description available & (q7fmw4|pdr15_orysa : 184.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 1416.0) & (original description: Putative ABCG14, Description = ABC transporter G family member 14, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01066_435655-442518' '(at1g02520 : 1194.0) P-glycoprotein 11 (PGP11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 12 (TAIR:AT1G02530.1); Has 844961 Blast hits to 391444 proteins in 4162 species: Archae - 14749; Bacteria - 659839; Metazoa - 18308; Fungi - 13140; Plants - 9783; Viruses - 35; Other Eukaryotes - 129107 (source: NCBI BLink). & (gnl|cdd|35278 : 1139.0) no description available & (q6yuu5|mdr_orysa : 686.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (gnl|cdd|31327 : 387.0) no description available & (reliability: 2388.0) & (original description: Putative mdr, Description = ABC transporter B family member 4, PFAM = PF00005;PF00664;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01073_744471-752288' '(gnl|cdd|35277 : 1300.0) no description available & (at3g13080 : 1199.0) encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; multidrug resistance-associated protein 3 (MRP3); FUNCTIONS IN: chlorophyll catabolite transmembrane transporter activity, ATPase activity, coupled to transmembrane movement of substances, glutathione S-conjugate-exporting ATPase activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: apoplast, vacuolar membrane, plasma membrane, plant-type vacuole; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 8 (TAIR:AT3G13090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|73003 : 344.0) no description available & (q6yuu5|mdr_orysa : 145.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 2398.0) & (original description: Putative mrp2, Description = MRP-like ABC transporter, PFAM = PF00005;PF00005;PF00664;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01111_364342-367883' '(at4g23030 : 515.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: stem, male gametophyte, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G52050.1); Has 11257 Blast hits to 11210 proteins in 2068 species: Archae - 244; Bacteria - 8067; Metazoa - 149; Fungi - 328; Plants - 1302; Viruses - 0; Other Eukaryotes - 1167 (source: NCBI BLink). & (gnl|cdd|36561 : 407.0) no description available & (gnl|cdd|30880 : 175.0) no description available & (reliability: 1030.0) & (original description: Putative DTX48, Description = Protein DETOXIFICATION 48, PFAM = PF01554;PF01554)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01146_880776-891841' '(q76cu2|pdr1_tobac : 2375.0) Pleiotropic drug resistance protein 1 (NtPDR1) - Nicotiana tabacum (Common tobacco) & (at1g15520 : 1998.0) ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.; pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink). & (gnl|cdd|35288 : 1696.0) no description available & (gnl|cdd|72991 : 279.0) no description available & (reliability: 3996.0) & (original description: Putative NbPDR11, Description = PDR-type ACB transporter, PFAM = PF08370;PF01061;PF01061;PF14510;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01171_856441-864424' '(q76cu2|pdr1_tobac : 256.0) Pleiotropic drug resistance protein 1 (NtPDR1) - Nicotiana tabacum (Common tobacco) & (at1g15520 : 209.0) ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.; pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink). & (gnl|cdd|35288 : 150.0) no description available & (gnl|cdd|72992 : 108.0) no description available & (reliability: 418.0) & (original description: Putative ABC1, Description = Pleiotropic drug resistance protein 1, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01284_235017-245987' '(at5g06530 : 980.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G52310.1); Has 401964 Blast hits to 364471 proteins in 4136 species: Archae - 7187; Bacteria - 315702; Metazoa - 9377; Fungi - 6648; Plants - 5639; Viruses - 7; Other Eukaryotes - 57404 (source: NCBI BLink). & (gnl|cdd|35284 : 524.0) no description available & (gnl|cdd|72993 : 228.0) no description available & (q7fmw4|pdr15_orysa : 176.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 1960.0) & (original description: Putative ABCG22, Description = ABC transporter G family member 22, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01304_750635-758912' '(at3g21250 : 1629.0) member of MRP subfamily; multidrug resistance-associated protein 6 (MRP6); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 14 (TAIR:AT3G59140.1). & (gnl|cdd|35277 : 1321.0) no description available & (gnl|cdd|73003 : 343.0) no description available & (q6yuu5|mdr_orysa : 100.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 3258.0) & (original description: Putative ABCC8, Description = ABC transporter C family member 8, PFAM = PF00005;PF00005;PF00664;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01374_990639-1003309' '(at1g59870 : 2119.0) ATP binding cassette transporter. Localized to the plasma membrane in uninfected cells. In infected leaves, the protein concentrated at infection sites. Contributes to nonhost resistance to inappropriate pathogens that enter by direct penetration in a salicylic acidñdependent manner. Required for mlo resistance. Has Cd transporter activity (Cd2+ extrusion pump) and contributes to heavy metal resistance.; PENETRATION 3 (PEN3); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, cadmium ion transmembrane transporter activity; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, plasma membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 7 (TAIR:AT1G15210.1); Has 392230 Blast hits to 282257 proteins in 3986 species: Archae - 7583; Bacteria - 315608; Metazoa - 9692; Fungi - 7346; Plants - 6702; Viruses - 4; Other Eukaryotes - 45295 (source: NCBI BLink). & (q5z9s8|pdr12_orysa : 2055.0) Pleiotropic drug resistance protein 12 - Oryza sativa (Rice) & (gnl|cdd|35288 : 1806.0) no description available & (gnl|cdd|72991 : 281.0) no description available & (reliability: 4238.0) & (original description: Putative ABCG36, Description = ABC transporter G family member 36, PFAM = PF00005;PF00005;PF01061;PF01061;PF08370;PF14510)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01375_543072-546886' '(at5g52860 : 667.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT4G25750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35284 : 449.0) no description available & (gnl|cdd|72972 : 194.0) no description available & (q7fmw4|pdr15_orysa : 161.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 1334.0) & (original description: Putative ABCG8, Description = ABC transporter G family member 8, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01402_42621-58680' '(at3g28345 : 1716.0) ABC transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, inflorescence meristem, cotyledon, hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 17 (TAIR:AT3G28380.1); Has 822177 Blast hits to 385706 proteins in 4160 species: Archae - 14477; Bacteria - 641696; Metazoa - 17642; Fungi - 12086; Plants - 9535; Viruses - 48; Other Eukaryotes - 126693 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 1624.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (gnl|cdd|35278 : 1494.0) no description available & (gnl|cdd|73008 : 387.0) no description available & (reliability: 3432.0) & (original description: Putative ABCB15, Description = ABC transporter B family member 15, PFAM = PF00005;PF00005;PF00664;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01472_211079-218234' '(at5g64840 : 910.0) member of GCN subfamily; general control non-repressible 5 (GCN5); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT5G09930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36145 : 591.0) no description available & (gnl|cdd|30834 : 492.0) no description available & (reliability: 1820.0) & (original description: Putative ABCF5, Description = ABC transporter F family member 5, PFAM = PF12848;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01543_88706-98115' '(at3g59140 : 1883.0) member of MRP subfamily; multidrug resistance-associated protein 14 (MRP14); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 6 (TAIR:AT3G21250.2); Has 673798 Blast hits to 360971 proteins in 4075 species: Archae - 12279; Bacteria - 544381; Metazoa - 13093; Fungi - 8967; Plants - 6941; Viruses - 21; Other Eukaryotes - 88116 (source: NCBI BLink). & (gnl|cdd|35277 : 1392.0) no description available & (gnl|cdd|73003 : 347.0) no description available & (q6yuu5|mdr_orysa : 134.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 3766.0) & (original description: Putative ABCC10, Description = ABC transporter C family member 10, PFAM = PF00664;PF00664;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01594_228245-232149' '(at2g13610 : 753.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT1G53270.1); Has 407800 Blast hits to 367819 proteins in 4141 species: Archae - 7220; Bacteria - 321377; Metazoa - 9869; Fungi - 7399; Plants - 5931; Viruses - 18; Other Eukaryotes - 55986 (source: NCBI BLink). & (gnl|cdd|35284 : 481.0) no description available & (gnl|cdd|72993 : 210.0) no description available & (q5w274|pdr3_tobac : 151.0) Pleiotropic drug resistance protein 3 (NtPDR3) - Nicotiana tabacum (Common tobacco) & (reliability: 1506.0) & (original description: Putative ABCG5, Description = ABC transporter G family member 5, PFAM = PF01061;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01634_61395-68197' '(at2g41700 : 260.0) ATP-binding cassette A1 (ABCA1); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, amino acid transmembrane transporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP-binding cassette A2 (TAIR:AT3G47730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|73022 : 176.0) no description available & (gnl|cdd|35282 : 168.0) no description available & (reliability: 520.0) & (original description: Putative abca3, Description = ATP-binding cassette sub-family A member 3, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01688_199120-203672' '(at1g31770 : 885.0) ATP-binding cassette 14 (ABCG14); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 394116 Blast hits to 359785 proteins in 4146 species: Archae - 7090; Bacteria - 311308; Metazoa - 8766; Fungi - 6614; Plants - 5656; Viruses - 7; Other Eukaryotes - 54675 (source: NCBI BLink). & (gnl|cdd|35284 : 534.0) no description available & (gnl|cdd|72993 : 225.0) no description available & (q7fmw4|pdr15_orysa : 189.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 1770.0) & (original description: Putative ABCG14, Description = ABC transporter G family member 14, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01694_774691-796446' '(at2g29940 : 2072.0) pleiotropic drug resistance 3 (PDR3); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: drug transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 12 (TAIR:AT1G15520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8s628|pdr13_orysa : 1863.0) Pleiotropic drug resistance protein 13 - Oryza sativa (Rice) & (gnl|cdd|35288 : 1623.0) no description available & (gnl|cdd|72991 : 277.0) no description available & (reliability: 4144.0) & (original description: Putative ABCG31, Description = ABC transporter G family member 31, PFAM = PF01061;PF01061;PF08370;PF00005;PF00005;PF14510)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01719_858258-868025' '(q76cu2|pdr1_tobac : 2781.0) Pleiotropic drug resistance protein 1 (NtPDR1) - Nicotiana tabacum (Common tobacco) & (at1g15520 : 2088.0) ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.; pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink). & (gnl|cdd|35288 : 1761.0) no description available & (gnl|cdd|72991 : 283.0) no description available & (reliability: 4176.0) & (original description: Putative PDR1, Description = Pleiotropic drug resistance protein 1, PFAM = PF00005;PF00005;PF01061;PF01061;PF08370;PF14510)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01719_901517-911568' '(q949g3|pdr1_nicpl : 2664.0) Pleiotropic drug resistance protein 1 (NpPDR1) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g15520 : 1955.0) ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.; pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink). & (gnl|cdd|35288 : 1732.0) no description available & (gnl|cdd|72991 : 278.0) no description available & (reliability: 3910.0) & (original description: Putative PDR1, Description = Pleiotropic drug resistance protein 1, PFAM = PF01061;PF01061;PF00005;PF00005;PF08370;PF14510)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01817_310298-318669' '(at3g59140 : 1442.0) member of MRP subfamily; multidrug resistance-associated protein 14 (MRP14); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 6 (TAIR:AT3G21250.2); Has 673798 Blast hits to 360971 proteins in 4075 species: Archae - 12279; Bacteria - 544381; Metazoa - 13093; Fungi - 8967; Plants - 6941; Viruses - 21; Other Eukaryotes - 88116 (source: NCBI BLink). & (gnl|cdd|35277 : 1319.0) no description available & (gnl|cdd|73003 : 342.0) no description available & (q6yuu5|mdr_orysa : 130.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 2884.0) & (original description: Putative ABCC10, Description = ABC transporter C family member 10, PFAM = PF00664;PF00664;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01890_167788-179820' '(at5g60740 : 1373.0) ABC transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: non-intrinsic ABC protein 12 (TAIR:AT2G37010.1); Has 368280 Blast hits to 339015 proteins in 4019 species: Archae - 6650; Bacteria - 293315; Metazoa - 9188; Fungi - 6366; Plants - 5378; Viruses - 18; Other Eukaryotes - 47365 (source: NCBI BLink). & (gnl|cdd|35284 : 402.0) no description available & (gnl|cdd|72972 : 245.0) no description available & (q7fmw4|pdr15_orysa : 169.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 2746.0) & (original description: Putative ABCG28, Description = ABC transporter G family member 28, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01911_1592429-1606539' '(at2g28070 : 1031.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: white-brown complex homolog protein 11 (TAIR:AT1G17840.1); Has 248098 Blast hits to 239858 proteins in 3812 species: Archae - 4857; Bacteria - 200822; Metazoa - 5202; Fungi - 4273; Plants - 3947; Viruses - 6; Other Eukaryotes - 28991 (source: NCBI BLink). & (gnl|cdd|35284 : 389.0) no description available & (gnl|cdd|72972 : 210.0) no description available & (q7fmw4|pdr15_orysa : 118.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 2062.0) & (original description: Putative ABCG3, Description = ABC transporter G family member 3, PFAM = PF01061;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01933_1240364-1261682' '(at1g53390 : 1224.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: non-intrinsic ABC protein 12 (TAIR:AT2G37010.1); Has 358264 Blast hits to 329272 proteins in 3990 species: Archae - 6355; Bacteria - 285632; Metazoa - 9572; Fungi - 6250; Plants - 5450; Viruses - 13; Other Eukaryotes - 44992 (source: NCBI BLink). & (gnl|cdd|35284 : 402.0) no description available & (gnl|cdd|72972 : 258.0) no description available & (q8gu89|pdr4_orysa : 177.0) Pleiotropic drug resistance protein 4 - Oryza sativa (Rice) & (reliability: 2448.0) & (original description: Putative ABCG24, Description = ABC transporter G family member 24, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01936_505545-540518' '(at4g39850 : 1989.0) Encodes a peroxisomal protein of the ATP binding cassette (ABC) transporter class (PMP subfamily) with significant identity to the human X-linked adrenoleukodystrophy protein (ALDP). The gene product promotes germination and represses embryo dormancy. ABI3, ABA1, FUS3 and LEC1 are epistatic to this gene. Mutants accumulate fatty acyl CoA suggesting a defect in uptake of fatty acyl CoA into the peroxisome.; peroxisomal ABC transporter 1 (PXA1); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, N-terminal (InterPro:IPR010509), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT1G54350.1). & (gnl|cdd|35283 : 679.0) no description available & (gnl|cdd|33918 : 291.0) no description available & (reliability: 3978.0) & (original description: Putative ABCC1, Description = ABC transporter D family member 1, PFAM = PF06472;PF06472;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf01965_7799-44336' '(at5g13750 : 562.0) zinc induced facilitator-like 1 (ZIFL1); FUNCTIONS IN: tetracycline:hydrogen antiporter activity; INVOLVED IN: response to karrikin; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Tetracycline resistance protein, TetA (InterPro:IPR001958), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: zinc induced facilitator 1 (TAIR:AT5G13740.1); Has 18147 Blast hits to 17729 proteins in 2581 species: Archae - 337; Bacteria - 13496; Metazoa - 505; Fungi - 2137; Plants - 360; Viruses - 0; Other Eukaryotes - 1312 (source: NCBI BLink). & (gnl|cdd|37826 : 369.0) no description available & (reliability: 1036.0) & (original description: Putative ZIFL1, Description = Protein ZINC INDUCED FACILITATOR-LIKE 1, PFAM = PF07690)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf02105_83624-94604' '(at4g31390 : 1060.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G79600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|31005 : 392.0) no description available & (gnl|cdd|36449 : 360.0) no description available & (reliability: 2120.0) & (original description: Putative aarF, Description = Putative unusual protein kinase, PFAM = PF03109)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf02212_3511-5857' '(q76cu2|pdr1_tobac : 181.0) Pleiotropic drug resistance protein 1 (NtPDR1) - Nicotiana tabacum (Common tobacco) & (at1g15520 : 112.0) ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.; pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative ABC1, Description = Pleiotropic drug resistance protein 1, PFAM = )' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf02240_368353-379592' '(at3g60160 : 1872.0) member of MRP subfamily; multidrug resistance-associated protein 9 (MRP9); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to nematode; LOCATED IN: integral to membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 15 (TAIR:AT3G60970.1); Has 679468 Blast hits to 355652 proteins in 3947 species: Archae - 12543; Bacteria - 548953; Metazoa - 12500; Fungi - 7906; Plants - 6622; Viruses - 19; Other Eukaryotes - 90925 (source: NCBI BLink). & (gnl|cdd|35277 : 1483.0) no description available & (gnl|cdd|73003 : 346.0) no description available & (q6yuu5|mdr_orysa : 204.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 3744.0) & (original description: Putative ABCC9, Description = ABC transporter C family member 9, PFAM = PF00664;PF00664;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf02249_176068-187183' '(gnl|cdd|35278 : 1207.0) no description available & (at3g28860 : 887.0) Belongs to the family of ATP-binding cassette (ABC) transporters. Also known as AtMDR11 and PGP19. Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Acts upstream of phyA in regulating hypocotyl elongation and gravitropic response. Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AtPGP1.; ATP binding cassette subfamily B19 (ABCB19); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, auxin efflux transmembrane transporter activity; INVOLVED IN: in 14 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP binding cassette subfamily B1 (TAIR:AT2G36910.1); Has 832220 Blast hits to 388750 proteins in 4155 species: Archae - 14331; Bacteria - 653917; Metazoa - 17455; Fungi - 11958; Plants - 9253; Viruses - 33; Other Eukaryotes - 125273 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 782.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (gnl|cdd|31327 : 374.0) no description available & (reliability: 1774.0) & (original description: Putative mdr16, Description = MDR-like ABC transporter, PFAM = PF00664;PF00664;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf02292_103033-107207' '(at3g54540 : 994.0) member of GCN subfamily; general control non-repressible 4 (GCN4); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: general control non-repressible 3 (TAIR:AT1G64550.1); Has 605377 Blast hits to 341410 proteins in 3920 species: Archae - 11643; Bacteria - 492389; Metazoa - 10210; Fungi - 6724; Plants - 5978; Viruses - 55; Other Eukaryotes - 78378 (source: NCBI BLink). & (gnl|cdd|35289 : 540.0) no description available & (gnl|cdd|30834 : 444.0) no description available & (reliability: 1988.0) & (original description: Putative ABCF1, Description = ATP-binding cassette sub-family F member 1, PFAM = PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf02312_607732-611282' '(at4g29140 : 607.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: shoot apex, embryo, hypocotyl, root; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G19700.1); Has 10278 Blast hits to 10238 proteins in 1962 species: Archae - 240; Bacteria - 7294; Metazoa - 150; Fungi - 320; Plants - 1306; Viruses - 0; Other Eukaryotes - 968 (source: NCBI BLink). & (gnl|cdd|36561 : 383.0) no description available & (gnl|cdd|30880 : 185.0) no description available & (reliability: 1214.0) & (original description: Putative DTX51, Description = Protein DETOXIFICATION 51, PFAM = PF01554;PF01554)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf02590_25144-30883' '(at4g27420 : 699.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: membrane; EXPRESSED IN: petal, leaf whorl, sepal, flower, egg cell; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 389492 Blast hits to 355855 proteins in 4126 species: Archae - 7031; Bacteria - 309319; Metazoa - 8330; Fungi - 6395; Plants - 5225; Viruses - 7; Other Eukaryotes - 53185 (source: NCBI BLink). & (gnl|cdd|35284 : 524.0) no description available & (gnl|cdd|72993 : 222.0) no description available & (q8gu90|pdr3_orysa : 196.0) Pleiotropic drug resistance protein 3 - Oryza sativa (Rice) & (reliability: 1398.0) & (original description: Putative ABCG9, Description = ABC transporter G family member 9, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf02655_1-8592' '(q76cu2|pdr1_tobac : 2069.0) Pleiotropic drug resistance protein 1 (NtPDR1) - Nicotiana tabacum (Common tobacco) & (at1g15520 : 1985.0) ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.; pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink). & (gnl|cdd|35288 : 1740.0) no description available & (gnl|cdd|72991 : 279.0) no description available & (reliability: 3970.0) & (original description: Putative PDR1, Description = Pleiotropic drug resistance protein 1, PFAM = PF00005;PF00005;PF14510;PF08370;PF01061;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf02792_127542-133294' '(gnl|cdd|35284 : 302.0) no description available & (at3g55090 : 277.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to cyclopentenone; LOCATED IN: membrane; EXPRESSED IN: sepal, root, flower, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT2G39350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72972 : 219.0) no description available & (q8gu89|pdr4_orysa : 147.0) Pleiotropic drug resistance protein 4 - Oryza sativa (Rice) & (reliability: 554.0) & (original description: Putative STR, Description = ABC transporter, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf02826_31607-45303' '(at3g47730 : 530.0) member of ATH subfamily; ATP-binding cassette A2 (ABCA2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 11 (TAIR:AT5G61730.1); Has 380556 Blast hits to 352092 proteins in 4023 species: Archae - 7135; Bacteria - 302205; Metazoa - 7915; Fungi - 4655; Plants - 4588; Viruses - 7; Other Eukaryotes - 54051 (source: NCBI BLink). & (gnl|cdd|35282 : 150.0) no description available & (reliability: 1060.0) & (original description: Putative BnaA03g40520D, Description = BnaA03g40520D protein, PFAM = PF12698)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf02880_64691-94390' '(gnl|cdd|35278 : 1530.0) no description available & (at4g18050 : 1428.0) P-glycoprotein 9 (PGP9); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 7 (TAIR:AT5G46540.1); Has 831635 Blast hits to 388928 proteins in 4153 species: Archae - 14569; Bacteria - 650940; Metazoa - 17965; Fungi - 11827; Plants - 9524; Viruses - 32; Other Eukaryotes - 126778 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 890.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (gnl|cdd|31327 : 385.0) no description available & (reliability: 2856.0) & (original description: Putative tamdr1, Description = Multidrug resistance protein 1 homolog, PFAM = PF00005;PF00005;PF00664;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf03036_778663-783947' '(gnl|cdd|35284 : 274.0) no description available & (at3g55100 : 244.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: membrane; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: white-brown complex homolog 19 (TAIR:AT3G55130.1); Has 392721 Blast hits to 356813 proteins in 4114 species: Archae - 7219; Bacteria - 309703; Metazoa - 8988; Fungi - 6487; Plants - 5627; Viruses - 12; Other Eukaryotes - 54685 (source: NCBI BLink). & (gnl|cdd|72972 : 202.0) no description available & (q8gu87|pdr6_orysa : 134.0) Pleiotropic drug resistance protein 6 - Oryza sativa (Rice) & (reliability: 488.0) & (original description: Putative STR2, Description = ABC transporter, PFAM = PF01061;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf03194_58187-81262' '(at3g47780 : 1216.0) member of ATH subfamily; ABC2 homolog 6 (ATH6); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 2 (TAIR:AT3G47740.1); Has 392088 Blast hits to 359274 proteins in 4025 species: Archae - 7301; Bacteria - 309060; Metazoa - 8340; Fungi - 5303; Plants - 5008; Viruses - 16; Other Eukaryotes - 57060 (source: NCBI BLink). & (gnl|cdd|35282 : 608.0) no description available & (gnl|cdd|73022 : 291.0) no description available & (q9mun1|cysa_mesvi : 103.0) Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Mesostigma viride & (reliability: 2432.0) & (original description: Putative BnaC07g31480D, Description = BnaC07g31480D protein, PFAM = PF00005;PF12698)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf03194_113381-130275' '(at3g47780 : 1269.0) member of ATH subfamily; ABC2 homolog 6 (ATH6); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 2 (TAIR:AT3G47740.1); Has 392088 Blast hits to 359274 proteins in 4025 species: Archae - 7301; Bacteria - 309060; Metazoa - 8340; Fungi - 5303; Plants - 5008; Viruses - 16; Other Eukaryotes - 57060 (source: NCBI BLink). & (gnl|cdd|35282 : 660.0) no description available & (gnl|cdd|73022 : 291.0) no description available & (q9mun1|cysa_mesvi : 95.5) Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Mesostigma viride & (reliability: 2538.0) & (original description: Putative ABCA7, Description = ABC transporter A family member 7, PFAM = PF12698;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf03194_210952-221484' '(at3g47730 : 1306.0) member of ATH subfamily; ATP-binding cassette A2 (ABCA2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 11 (TAIR:AT5G61730.1); Has 380556 Blast hits to 352092 proteins in 4023 species: Archae - 7135; Bacteria - 302205; Metazoa - 7915; Fungi - 4655; Plants - 4588; Viruses - 7; Other Eukaryotes - 54051 (source: NCBI BLink). & (gnl|cdd|35282 : 508.0) no description available & (gnl|cdd|73022 : 295.0) no description available & (q9mun1|cysa_mesvi : 84.0) Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Mesostigma viride & (reliability: 2612.0) & (original description: Putative ABCA2, Description = ABC transporter A family member 2, PFAM = PF00005;PF12698)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf03278_223769-259193' '(at1g70610 : 916.0) member of TAP subfamily; transporter associated with antigen processing protein 1 (TAP1); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: transporter associated with antigen processing protein 2 (TAIR:AT5G39040.1); Has 433965 Blast hits to 389325 proteins in 4163 species: Archae - 7467; Bacteria - 334124; Metazoa - 10295; Fungi - 7727; Plants - 5683; Viruses - 22; Other Eukaryotes - 68647 (source: NCBI BLink). & (gnl|cdd|35281 : 612.0) no description available & (gnl|cdd|31327 : 390.0) no description available & (q6yuu5|mdr_orysa : 254.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 1832.0) & (original description: Putative ABCB26, Description = ABC transporter B family member 26, chloroplastic, PFAM = PF00005;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf03396_535167-558384' '(at1g65950 : 575.0) Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ABC2 homolog 9 (TAIR:AT2G40090.1); Has 9535 Blast hits to 9504 proteins in 1790 species: Archae - 124; Bacteria - 4369; Metazoa - 419; Fungi - 493; Plants - 742; Viruses - 14; Other Eukaryotes - 3374 (source: NCBI BLink). & (gnl|cdd|36449 : 363.0) no description available & (gnl|cdd|31005 : 272.0) no description available & (reliability: 1150.0) & (original description: Putative At1g65950, Description = Protein kinase superfamily protein, PFAM = PF03109)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf03437_129817-133377' '(at1g67940 : 358.0) member of NAP subfamily; non-intrinsic ABC protein 3 (NAP3); FUNCTIONS IN: transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transport system permease protein 1 (InterPro:IPR005670), ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 7 (TAIR:AT5G46540.1); Has 422748 Blast hits to 381356 proteins in 3991 species: Archae - 7530; Bacteria - 326504; Metazoa - 9961; Fungi - 7250; Plants - 4967; Viruses - 18; Other Eukaryotes - 66518 (source: NCBI BLink). & (gnl|cdd|73019 : 254.0) no description available & (gnl|cdd|35278 : 213.0) no description available & (p56344|cysa_chlvu : 130.0) Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Chlorella vulgaris (Green alga) & (reliability: 716.0) & (original description: Putative ABCI17, Description = ABC transporter I family member 17, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf03561_23570-104767' '(at2g07680 : 1566.0) member of MRP subfamily; multidrug resistance-associated protein 11 (MRP11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 2 (TAIR:AT2G34660.2); Has 539195 Blast hits to 324792 proteins in 3896 species: Archae - 9326; Bacteria - 437824; Metazoa - 12258; Fungi - 6863; Plants - 5577; Viruses - 6; Other Eukaryotes - 67341 (source: NCBI BLink). & (gnl|cdd|35277 : 1205.0) no description available & (gnl|cdd|73003 : 303.0) no description available & (q6yuu5|mdr_orysa : 179.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 3132.0) & (original description: Putative ABCC13, Description = ABC transporter C family member 13, PFAM = PF00005;PF00005;PF00664;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf03561_53304-104698' '(at2g07680 : 1301.0) member of MRP subfamily; multidrug resistance-associated protein 11 (MRP11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 2 (TAIR:AT2G34660.2); Has 539195 Blast hits to 324792 proteins in 3896 species: Archae - 9326; Bacteria - 437824; Metazoa - 12258; Fungi - 6863; Plants - 5577; Viruses - 6; Other Eukaryotes - 67341 (source: NCBI BLink). & (gnl|cdd|35277 : 943.0) no description available & (gnl|cdd|73009 : 291.0) no description available & (q6yuu5|mdr_orysa : 82.4) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 2602.0) & (original description: Putative MRP1, Description = ABC transporter C family member 13, PFAM = PF00005;PF00664;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf03628_1130121-1133926' '(at1g53270 : 570.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT2G13610.1); Has 412109 Blast hits to 371848 proteins in 4161 species: Archae - 7411; Bacteria - 324065; Metazoa - 9151; Fungi - 7073; Plants - 5804; Viruses - 6; Other Eukaryotes - 58599 (source: NCBI BLink). & (gnl|cdd|35284 : 476.0) no description available & (gnl|cdd|72993 : 208.0) no description available & (q5w274|pdr3_tobac : 190.0) Pleiotropic drug resistance protein 3 (NtPDR3) - Nicotiana tabacum (Common tobacco) & (reliability: 1140.0) & (original description: Putative ABCG10, Description = ABC transporter G family member 10, PFAM = PF01061;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf03634_788234-852346' '(at2g34660 : 2055.0) encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; multidrug resistance-associated protein 2 (MRP2); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 1 (TAIR:AT1G30400.2). & (gnl|cdd|35277 : 1522.0) no description available & (gnl|cdd|73003 : 362.0) no description available & (q6yuu5|mdr_orysa : 119.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 4110.0) & (original description: Putative ABCC11, Description = ABC transporter C family member 11, PFAM = PF00005;PF00005;PF00664;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf03634_809432-819754' '(at2g34660 : 212.0) encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; multidrug resistance-associated protein 2 (MRP2); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 1 (TAIR:AT1G30400.2). & (gnl|cdd|35277 : 164.0) no description available & (reliability: 424.0) & (original description: Putative abcc1, Description = Multidrug resistance protein ABC transporter family protein, PFAM = PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf03685_80285-83871' '(at4g29140 : 616.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: shoot apex, embryo, hypocotyl, root; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G19700.1); Has 10278 Blast hits to 10238 proteins in 1962 species: Archae - 240; Bacteria - 7294; Metazoa - 150; Fungi - 320; Plants - 1306; Viruses - 0; Other Eukaryotes - 968 (source: NCBI BLink). & (gnl|cdd|36561 : 398.0) no description available & (gnl|cdd|30880 : 203.0) no description available & (reliability: 1232.0) & (original description: Putative DTX51, Description = Protein DETOXIFICATION 51, PFAM = PF01554;PF01554)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf03857_461643-469290' '(at2g47800 : 1780.0) Encodes a plasma membrane localized ATPase transporter involved in multidrug transport. The expression of this gene is upregulated by herbicide safeners such as benoxacor, fluxofenim and fenclorim.; multidrug resistance-associated protein 4 (MRP4); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, folic acid transporter activity; INVOLVED IN: response to water deprivation, drug transmembrane transport, response to wounding, response to nematode, stomatal movement; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 10 (TAIR:AT3G62700.1); Has 714857 Blast hits to 368077 proteins in 3991 species: Archae - 12925; Bacteria - 579268; Metazoa - 12980; Fungi - 8565; Plants - 6599; Viruses - 19; Other Eukaryotes - 94501 (source: NCBI BLink). & (gnl|cdd|35277 : 1465.0) no description available & (gnl|cdd|73003 : 367.0) no description available & (q6yuu5|mdr_orysa : 140.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 3560.0) & (original description: Putative ABCC4, Description = ABC transporter C family member 4, PFAM = PF00664;PF00664;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf03877_71727-79268' '(at3g21090 : 327.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to karrikin; LOCATED IN: membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT1G51500.1); Has 380370 Blast hits to 349027 proteins in 4089 species: Archae - 6846; Bacteria - 303738; Metazoa - 8409; Fungi - 6671; Plants - 5430; Viruses - 12; Other Eukaryotes - 49264 (source: NCBI BLink). & (gnl|cdd|35284 : 227.0) no description available & (gnl|cdd|85216 : 107.0) no description available & (reliability: 654.0) & (original description: Putative Os09g0125900, Description = ABC transporter-like protein, PFAM = PF01061;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf03925_105490-111939' '(at3g54540 : 985.0) member of GCN subfamily; general control non-repressible 4 (GCN4); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: general control non-repressible 3 (TAIR:AT1G64550.1); Has 605377 Blast hits to 341410 proteins in 3920 species: Archae - 11643; Bacteria - 492389; Metazoa - 10210; Fungi - 6724; Plants - 5978; Viruses - 55; Other Eukaryotes - 78378 (source: NCBI BLink). & (gnl|cdd|35289 : 531.0) no description available & (gnl|cdd|30834 : 441.0) no description available & (reliability: 1970.0) & (original description: Putative abc1, Description = ATP-binding cassette sub-family F member 1, PFAM = PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf04040_3266-6445' '(at3g13220 : 150.0) Encodes a ATP-binding cassette transporter G26 (ABCG26) involved in tapetal cell and pollen development. Required for male fertility and pollen exine formation.; WBC27; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G52310.1); Has 402808 Blast hits to 366123 proteins in 4145 species: Archae - 7203; Bacteria - 319822; Metazoa - 8717; Fungi - 6492; Plants - 5411; Viruses - 13; Other Eukaryotes - 55150 (source: NCBI BLink). & (gnl|cdd|35284 : 148.0) no description available & (gnl|cdd|72993 : 114.0) no description available & (reliability: 300.0) & (original description: Putative WBC9, Description = AAA+ ATPase domain-containing protein, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf04083_457282-462810' '(at1g79600 : 980.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G71810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31005 : 403.0) no description available & (gnl|cdd|36449 : 385.0) no description available & (reliability: 1960.0) & (original description: Putative aarF, Description = ABC1-like kinase, PFAM = PF03109)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf04294_198502-212845' '(at4g38380 : 359.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G38330.1); Has 13476 Blast hits to 13444 proteins in 2154 species: Archae - 331; Bacteria - 10835; Metazoa - 81; Fungi - 150; Plants - 389; Viruses - 0; Other Eukaryotes - 1690 (source: NCBI BLink). & (gnl|cdd|30880 : 114.0) no description available & (gnl|cdd|36561 : 84.7) no description available & (reliability: 718.0) & (original description: Putative mate2, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554;PF01554)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf04306_7133-14871' '(at3g13080 : 1934.0) encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; multidrug resistance-associated protein 3 (MRP3); FUNCTIONS IN: chlorophyll catabolite transmembrane transporter activity, ATPase activity, coupled to transmembrane movement of substances, glutathione S-conjugate-exporting ATPase activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: apoplast, vacuolar membrane, plasma membrane, plant-type vacuole; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 8 (TAIR:AT3G13090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35277 : 1525.0) no description available & (gnl|cdd|73003 : 347.0) no description available & (q6yuu5|mdr_orysa : 110.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 3868.0) & (original description: Putative ABCC3, Description = ABC transporter C family member 3, PFAM = PF00664;PF00664;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf04329_569836-585940' '(at5g03910 : 639.0) member of ATH subfamily; ABC2 homolog 12 (ATH12); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 14 (TAIR:AT1G28010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35281 : 459.0) no description available & (gnl|cdd|31327 : 352.0) no description available & (q6yuu5|mdr_orysa : 194.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 1278.0) & (original description: Putative ABCB29, Description = ABC transporter B family member 29, chloroplastic, PFAM = PF00664;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf04401_166997-170646' '(at4g29140 : 591.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: shoot apex, embryo, hypocotyl, root; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G19700.1); Has 10278 Blast hits to 10238 proteins in 1962 species: Archae - 240; Bacteria - 7294; Metazoa - 150; Fungi - 320; Plants - 1306; Viruses - 0; Other Eukaryotes - 968 (source: NCBI BLink). & (gnl|cdd|36561 : 378.0) no description available & (gnl|cdd|30880 : 183.0) no description available & (reliability: 1182.0) & (original description: Putative DTX51, Description = Protein DETOXIFICATION 51, PFAM = PF01554;PF01554)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf04623_193348-203316' '(at2g47800 : 1988.0) Encodes a plasma membrane localized ATPase transporter involved in multidrug transport. The expression of this gene is upregulated by herbicide safeners such as benoxacor, fluxofenim and fenclorim.; multidrug resistance-associated protein 4 (MRP4); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, folic acid transporter activity; INVOLVED IN: response to water deprivation, drug transmembrane transport, response to wounding, response to nematode, stomatal movement; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 10 (TAIR:AT3G62700.1); Has 714857 Blast hits to 368077 proteins in 3991 species: Archae - 12925; Bacteria - 579268; Metazoa - 12980; Fungi - 8565; Plants - 6599; Viruses - 19; Other Eukaryotes - 94501 (source: NCBI BLink). & (gnl|cdd|35277 : 1491.0) no description available & (gnl|cdd|73003 : 359.0) no description available & (q6yuu5|mdr_orysa : 136.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 3976.0) & (original description: Putative ABCC14, Description = ABC transporter C family member 14, PFAM = PF00664;PF00664;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf04639_615651-627375' '(at2g28070 : 1044.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: white-brown complex homolog protein 11 (TAIR:AT1G17840.1); Has 248098 Blast hits to 239858 proteins in 3812 species: Archae - 4857; Bacteria - 200822; Metazoa - 5202; Fungi - 4273; Plants - 3947; Viruses - 6; Other Eukaryotes - 28991 (source: NCBI BLink). & (gnl|cdd|35284 : 400.0) no description available & (gnl|cdd|72972 : 213.0) no description available & (q7fmw4|pdr15_orysa : 115.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 2088.0) & (original description: Putative ABCG3, Description = ABC transporter G family member 3, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf04663_116249-125632' '(q76cu2|pdr1_tobac : 2101.0) Pleiotropic drug resistance protein 1 (NtPDR1) - Nicotiana tabacum (Common tobacco) & (at1g15520 : 1989.0) ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.; pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink). & (gnl|cdd|35288 : 1745.0) no description available & (gnl|cdd|72991 : 278.0) no description available & (reliability: 3978.0) & (original description: Putative ABCG36, Description = ABC transporter G family member 36, PFAM = PF00005;PF00005;PF08370;PF01061;PF01061;PF14510)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf04669_41383-45200' '(at1g53270 : 613.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT2G13610.1); Has 412109 Blast hits to 371848 proteins in 4161 species: Archae - 7411; Bacteria - 324065; Metazoa - 9151; Fungi - 7073; Plants - 5804; Viruses - 6; Other Eukaryotes - 58599 (source: NCBI BLink). & (gnl|cdd|35284 : 501.0) no description available & (gnl|cdd|72993 : 216.0) no description available & (q5w274|pdr3_tobac : 205.0) Pleiotropic drug resistance protein 3 (NtPDR3) - Nicotiana tabacum (Common tobacco) & (reliability: 1226.0) & (original description: Putative ABCG10, Description = ABC transporter G family member 10, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf04905_625082-639529' '(gnl|cdd|35277 : 1297.0) no description available & (at3g13080 : 1202.0) encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; multidrug resistance-associated protein 3 (MRP3); FUNCTIONS IN: chlorophyll catabolite transmembrane transporter activity, ATPase activity, coupled to transmembrane movement of substances, glutathione S-conjugate-exporting ATPase activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: apoplast, vacuolar membrane, plasma membrane, plant-type vacuole; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 8 (TAIR:AT3G13090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|73003 : 347.0) no description available & (q6yuu5|mdr_orysa : 145.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 2404.0) & (original description: Putative mrp2, Description = MRP-like ABC transporter, PFAM = PF00664;PF00664;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf04958_70391-82235' '(q76cu2|pdr1_tobac : 2426.0) Pleiotropic drug resistance protein 1 (NtPDR1) - Nicotiana tabacum (Common tobacco) & (at1g15520 : 2011.0) ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.; pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink). & (gnl|cdd|35288 : 1688.0) no description available & (gnl|cdd|72991 : 282.0) no description available & (reliability: 4022.0) & (original description: Putative PDR1, Description = Pleiotropic drug resistance protein 1, PFAM = PF01061;PF01061;PF14510;PF00005;PF00005;PF08370)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf04959_1798-5384' '(at4g23030 : 544.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: stem, male gametophyte, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G52050.1); Has 11257 Blast hits to 11210 proteins in 2068 species: Archae - 244; Bacteria - 8067; Metazoa - 149; Fungi - 328; Plants - 1302; Viruses - 0; Other Eukaryotes - 1167 (source: NCBI BLink). & (gnl|cdd|36561 : 403.0) no description available & (gnl|cdd|30880 : 189.0) no description available & (reliability: 1088.0) & (original description: Putative DTX49, Description = Protein DETOXIFICATION 49, PFAM = PF01554;PF01554)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf05081_128688-138164' '(at2g37010 : 1305.0) member of NAP subfamily; non-intrinsic ABC protein 12 (NAP12); FUNCTIONS IN: transporter activity; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT5G60740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35284 : 393.0) no description available & (gnl|cdd|72972 : 239.0) no description available & (q8gu90|pdr3_orysa : 149.0) Pleiotropic drug resistance protein 3 - Oryza sativa (Rice) & (reliability: 2610.0) & (original description: Putative WBC30, Description = Putative white-brown complex homolog protein 30, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf05087_237607-253335' '(at5g14100 : 325.0) member of NAP subfamily; non-intrinsic ABC protein 14 (NAP14); FUNCTIONS IN: transporter activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT4G33460.1); Has 403186 Blast hits to 364909 proteins in 4058 species: Archae - 7357; Bacteria - 322932; Metazoa - 7473; Fungi - 4759; Plants - 4437; Viruses - 20; Other Eukaryotes - 56208 (source: NCBI BLink). & (gnl|cdd|72984 : 195.0) no description available & (gnl|cdd|35278 : 176.0) no description available & (q9mun1|cysa_mesvi : 88.2) Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Mesostigma viride & (reliability: 650.0) & (original description: Putative ABCI11, Description = ABC transporter I family member 11, chloroplastic, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf05087_240112-253356' '(at5g14100 : 279.0) member of NAP subfamily; non-intrinsic ABC protein 14 (NAP14); FUNCTIONS IN: transporter activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT4G33460.1); Has 403186 Blast hits to 364909 proteins in 4058 species: Archae - 7357; Bacteria - 322932; Metazoa - 7473; Fungi - 4759; Plants - 4437; Viruses - 20; Other Eukaryotes - 56208 (source: NCBI BLink). & (gnl|cdd|72984 : 162.0) no description available & (gnl|cdd|35278 : 139.0) no description available & (p56344|cysa_chlvu : 82.8) Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Chlorella vulgaris (Green alga) & (reliability: 558.0) & (original description: Putative cbiO, Description = ECF transporter A component EcfA, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf05166_79450-96557' '(at3g47780 : 995.0) member of ATH subfamily; ABC2 homolog 6 (ATH6); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 2 (TAIR:AT3G47740.1); Has 392088 Blast hits to 359274 proteins in 4025 species: Archae - 7301; Bacteria - 309060; Metazoa - 8340; Fungi - 5303; Plants - 5008; Viruses - 16; Other Eukaryotes - 57060 (source: NCBI BLink). & (gnl|cdd|35282 : 574.0) no description available & (gnl|cdd|73022 : 294.0) no description available & (p56344|cysa_chlvu : 97.1) Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Chlorella vulgaris (Green alga) & (reliability: 1990.0) & (original description: Putative ATH2, Description = ABC transporter A family member 7, PFAM = PF12698;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf05166_115827-124282' '(at3g47730 : 1084.0) member of ATH subfamily; ATP-binding cassette A2 (ABCA2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 11 (TAIR:AT5G61730.1); Has 380556 Blast hits to 352092 proteins in 4023 species: Archae - 7135; Bacteria - 302205; Metazoa - 7915; Fungi - 4655; Plants - 4588; Viruses - 7; Other Eukaryotes - 54051 (source: NCBI BLink). & (gnl|cdd|35282 : 461.0) no description available & (gnl|cdd|73022 : 285.0) no description available & (q9g4f5|cysa_cucsa : 92.4) Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Cucumis sativus (Cucumber) & (reliability: 2168.0) & (original description: Putative ATH1, Description = ABC transporter A family member 2, PFAM = PF00005;PF12698)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf05166_116938-123343' '(at3g47730 : 888.0) member of ATH subfamily; ATP-binding cassette A2 (ABCA2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 11 (TAIR:AT5G61730.1); Has 380556 Blast hits to 352092 proteins in 4023 species: Archae - 7135; Bacteria - 302205; Metazoa - 7915; Fungi - 4655; Plants - 4588; Viruses - 7; Other Eukaryotes - 54051 (source: NCBI BLink). & (gnl|cdd|35282 : 443.0) no description available & (gnl|cdd|73022 : 283.0) no description available & (q9g4f5|cysa_cucsa : 92.8) Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Cucumis sativus (Cucumber) & (reliability: 1776.0) & (original description: Putative ABCA11, Description = ABC transporter A family member 11, PFAM = PF00005;PF12698)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf05249_729536-745771' '(gnl|cdd|35278 : 1310.0) no description available & (at1g02520 : 1267.0) P-glycoprotein 11 (PGP11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 12 (TAIR:AT1G02530.1); Has 844961 Blast hits to 391444 proteins in 4162 species: Archae - 14749; Bacteria - 659839; Metazoa - 18308; Fungi - 13140; Plants - 9783; Viruses - 35; Other Eukaryotes - 129107 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 800.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (gnl|cdd|73008 : 369.0) no description available & (reliability: 2534.0) & (original description: Putative mdr, Description = ABC transporter B family member 4, PFAM = PF00664;PF00664;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf05306_277854-282073' '(at5g13580 : 872.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to nematode; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G55090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35284 : 559.0) no description available & (gnl|cdd|72993 : 215.0) no description available & (q8gu86|pdr5_orysa : 182.0) Pleiotropic drug resistance protein 5 - Oryza sativa (Rice) & (reliability: 1744.0) & (original description: Putative ABCG20, Description = ABC transporter G family member 20, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf05490_57747-64890' '(gnl|cdd|35278 : 1327.0) no description available & (q6yuu5|mdr_orysa : 1187.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (at3g28345 : 1182.0) ABC transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, inflorescence meristem, cotyledon, hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 17 (TAIR:AT3G28380.1); Has 822177 Blast hits to 385706 proteins in 4160 species: Archae - 14477; Bacteria - 641696; Metazoa - 17642; Fungi - 12086; Plants - 9535; Viruses - 48; Other Eukaryotes - 126693 (source: NCBI BLink). & (gnl|cdd|73008 : 366.0) no description available & (reliability: 2364.0) & (original description: Putative mdr17, Description = ABC transporter B family member 15, PFAM = PF00664;PF00664;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf05552_1077510-1087412' '(at4g25450 : 869.0) member of NAP subfamily; non-intrinsic ABC protein 8 (NAP8); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: transporter associated with antigen processing protein 2 (TAIR:AT5G39040.1); Has 420091 Blast hits to 380969 proteins in 4118 species: Archae - 7380; Bacteria - 326284; Metazoa - 9897; Fungi - 7311; Plants - 5559; Viruses - 14; Other Eukaryotes - 63646 (source: NCBI BLink). & (gnl|cdd|35281 : 455.0) no description available & (gnl|cdd|31327 : 382.0) no description available & (q6yuu5|mdr_orysa : 224.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 1738.0) & (original description: Putative ABCB28, Description = ABC transporter B family member 28, PFAM = PF00005;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf05767_823493-831075' '(at3g59140 : 1397.0) member of MRP subfamily; multidrug resistance-associated protein 14 (MRP14); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 6 (TAIR:AT3G21250.2); Has 673798 Blast hits to 360971 proteins in 4075 species: Archae - 12279; Bacteria - 544381; Metazoa - 13093; Fungi - 8967; Plants - 6941; Viruses - 21; Other Eukaryotes - 88116 (source: NCBI BLink). & (gnl|cdd|35277 : 1287.0) no description available & (gnl|cdd|73003 : 342.0) no description available & (q6yuu5|mdr_orysa : 117.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 2794.0) & (original description: Putative ABCC10, Description = ABC transporter C family member 10, PFAM = PF00664;PF00664;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf05997_133291-137726' '(gnl|cdd|37566 : 406.0) no description available & (at1g03905 : 392.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G44110.1); Has 185812 Blast hits to 177765 proteins in 3375 species: Archae - 3786; Bacteria - 158244; Metazoa - 1934; Fungi - 1485; Plants - 1792; Viruses - 4; Other Eukaryotes - 18567 (source: NCBI BLink). & (gnl|cdd|34224 : 167.0) no description available & (reliability: 784.0) & (original description: Putative ABCI19, Description = ABC transporter I family member 19, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf06005_53221-59832' '(q76cu2|pdr1_tobac : 805.0) Pleiotropic drug resistance protein 1 (NtPDR1) - Nicotiana tabacum (Common tobacco) & (at1g15520 : 663.0) ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.; pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink). & (gnl|cdd|35288 : 519.0) no description available & (gnl|cdd|72993 : 147.0) no description available & (reliability: 1326.0) & (original description: Putative ABC1, Description = Pleiotropic drug resistance protein 1, PFAM = PF00005;PF14510)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf06005_57162-59726' '(q76cu2|pdr1_tobac : 297.0) Pleiotropic drug resistance protein 1 (NtPDR1) - Nicotiana tabacum (Common tobacco) & (at1g15520 : 276.0) ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.; pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink). & (gnl|cdd|35288 : 252.0) no description available & (gnl|cdd|72992 : 132.0) no description available & (reliability: 552.0) & (original description: Putative ABC1, Description = Pleiotropic drug resistance protein 1, PFAM = )' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf06172_504249-515685' '(at3g28860 : 2007.0) Belongs to the family of ATP-binding cassette (ABC) transporters. Also known as AtMDR11 and PGP19. Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Acts upstream of phyA in regulating hypocotyl elongation and gravitropic response. Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AtPGP1.; ATP binding cassette subfamily B19 (ABCB19); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, auxin efflux transmembrane transporter activity; INVOLVED IN: in 14 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP binding cassette subfamily B1 (TAIR:AT2G36910.1); Has 832220 Blast hits to 388750 proteins in 4155 species: Archae - 14331; Bacteria - 653917; Metazoa - 17455; Fungi - 11958; Plants - 9253; Viruses - 33; Other Eukaryotes - 125273 (source: NCBI BLink). & (gnl|cdd|35278 : 1569.0) no description available & (q6yuu5|mdr_orysa : 971.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (gnl|cdd|73008 : 413.0) no description available & (reliability: 4014.0) & (original description: Putative ABCB19, Description = ABC transporter B family member 19, PFAM = PF00005;PF00005;PF00664;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf06207_133191-136762' '(at4g23030 : 511.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: stem, male gametophyte, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G52050.1); Has 11257 Blast hits to 11210 proteins in 2068 species: Archae - 244; Bacteria - 8067; Metazoa - 149; Fungi - 328; Plants - 1302; Viruses - 0; Other Eukaryotes - 1167 (source: NCBI BLink). & (gnl|cdd|36561 : 401.0) no description available & (gnl|cdd|30880 : 184.0) no description available & (reliability: 1022.0) & (original description: Putative DTX50, Description = Protein DETOXIFICATION 50, PFAM = PF01554;PF01554)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf06207_133224-136789' '(at4g23030 : 511.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: stem, male gametophyte, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G52050.1); Has 11257 Blast hits to 11210 proteins in 2068 species: Archae - 244; Bacteria - 8067; Metazoa - 149; Fungi - 328; Plants - 1302; Viruses - 0; Other Eukaryotes - 1167 (source: NCBI BLink). & (gnl|cdd|36561 : 401.0) no description available & (gnl|cdd|30880 : 184.0) no description available & (reliability: 1022.0) & (original description: Putative DTX49, Description = Protein DETOXIFICATION 49, PFAM = PF01554;PF01554)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf06524_259738-267692' '(at1g32500 : 558.0) Encodes a member of a heterogenous group of non-intrinsic ATP-binding cassette (ABC) proteins. Members of this group bear no close resemblance to each other nor to representatives of specific ABC protein subfamilies from other organisms. This grouping is arbitrary and will likely change upon acquisition of further data.; non-intrinsic ABC protein 6 (NAP6); CONTAINS InterPro DOMAIN/s: SUF system FeS cluster assembly, SufBD (InterPro:IPR000825); BEST Arabidopsis thaliana protein match is: ATP binding cassette protein 1 (TAIR:AT4G04770.1); Has 9763 Blast hits to 9763 proteins in 1806 species: Archae - 246; Bacteria - 6215; Metazoa - 1; Fungi - 6; Plants - 107; Viruses - 0; Other Eukaryotes - 3188 (source: NCBI BLink). & (gnl|cdd|31063 : 203.0) no description available & (reliability: 1116.0) & (original description: Putative sufD, Description = Protein ABCI7, chloroplastic, PFAM = PF01458)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf06528_454928-495533' '(at2g34660 : 2326.0) encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; multidrug resistance-associated protein 2 (MRP2); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 1 (TAIR:AT1G30400.2). & (gnl|cdd|35277 : 1571.0) no description available & (gnl|cdd|73003 : 363.0) no description available & (q6yuu5|mdr_orysa : 233.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 4652.0) & (original description: Putative ABCC2, Description = ABC transporter C family member 2, PFAM = PF00005;PF00005;PF00664;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf06528_477341-496518' '(at1g30400 : 645.0) glutathione S-conjugate transporting ATPase (AtMRP1) mRNA. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 1 (ATMRP1); FUNCTIONS IN: xenobiotic-transporting ATPase activity, ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to cyclopentenone; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 2 (TAIR:AT2G34660.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35277 : 298.0) no description available & (reliability: 1290.0) & (original description: Putative BnaA07g07330D, Description = BnaA07g07330D protein, PFAM = PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf06683_131572-145008' '(at4g25960 : 1749.0) P-glycoprotein 2 (PGP2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 10 (TAIR:AT1G10680.1); Has 857619 Blast hits to 396855 proteins in 4207 species: Archae - 14871; Bacteria - 670687; Metazoa - 17931; Fungi - 12963; Plants - 9451; Viruses - 35; Other Eukaryotes - 131681 (source: NCBI BLink). & (gnl|cdd|35278 : 1500.0) no description available & (q6yuu5|mdr_orysa : 919.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (gnl|cdd|73008 : 384.0) no description available & (reliability: 3498.0) & (original description: Putative ABCB2, Description = ABC transporter B family member 2, PFAM = PF00005;PF00005;PF00664;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf07162_141416-145401' '(at5g19410 : 691.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT5G52860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35284 : 504.0) no description available & (gnl|cdd|72993 : 194.0) no description available & (q5z9s8|pdr12_orysa : 166.0) Pleiotropic drug resistance protein 12 - Oryza sativa (Rice) & (reliability: 1382.0) & (original description: Putative ABCG23, Description = ABC transporter G family member 23, PFAM = PF01061;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf07226_349279-354426' '(at1g31770 : 927.0) ATP-binding cassette 14 (ABCG14); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 394116 Blast hits to 359785 proteins in 4146 species: Archae - 7090; Bacteria - 311308; Metazoa - 8766; Fungi - 6614; Plants - 5656; Viruses - 7; Other Eukaryotes - 54675 (source: NCBI BLink). & (gnl|cdd|35284 : 539.0) no description available & (gnl|cdd|72993 : 227.0) no description available & (q7fmw4|pdr15_orysa : 196.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 1854.0) & (original description: Putative ABCG14, Description = ABC transporter G family member 14, PFAM = PF01061;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf07227_179061-183950' '(at2g39350 : 969.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G55090.1); Has 383683 Blast hits to 350637 proteins in 4113 species: Archae - 6942; Bacteria - 305769; Metazoa - 8575; Fungi - 6049; Plants - 5390; Viruses - 9; Other Eukaryotes - 50949 (source: NCBI BLink). & (gnl|cdd|35284 : 591.0) no description available & (gnl|cdd|72993 : 218.0) no description available & (q8gu90|pdr3_orysa : 186.0) Pleiotropic drug resistance protein 3 - Oryza sativa (Rice) & (reliability: 1938.0) & (original description: Putative ABCG1, Description = ABC transporter G family member 1, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf07409_6617-13353' '(gnl|cdd|35278 : 1355.0) no description available & (at3g28390 : 1172.0) P-glycoprotein 18 (PGP18); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 17 (TAIR:AT3G28380.1); Has 821159 Blast hits to 385866 proteins in 4148 species: Archae - 14469; Bacteria - 641805; Metazoa - 17559; Fungi - 12131; Plants - 9466; Viruses - 43; Other Eukaryotes - 125686 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 1169.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (gnl|cdd|73008 : 398.0) no description available & (reliability: 2344.0) & (original description: Putative ABCB18, Description = ABC transporter B family member 18, PFAM = PF00664;PF00664;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf07442_49920-57742' '(at3g62150 : 1688.0) P-glycoprotein 21 (PGP21); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP binding cassette subfamily B4 (TAIR:AT2G47000.1); Has 850676 Blast hits to 393228 proteins in 4171 species: Archae - 14744; Bacteria - 664075; Metazoa - 17906; Fungi - 12823; Plants - 9925; Viruses - 47; Other Eukaryotes - 131156 (source: NCBI BLink). & (gnl|cdd|35278 : 1631.0) no description available & (q6yuu5|mdr_orysa : 883.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (gnl|cdd|31327 : 386.0) no description available & (reliability: 3376.0) & (original description: Putative ABCB11, Description = ABC transporter B family member 11, PFAM = PF00005;PF00005;PF00664;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf07466_589913-601315' '(at1g54350 : 823.0) ABC transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter, N-terminal (InterPro:IPR010509), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: peroxisomal ABC transporter 1 (TAIR:AT4G39850.3); Has 196809 Blast hits to 191927 proteins in 3574 species: Archae - 3050; Bacteria - 158969; Metazoa - 4367; Fungi - 3288; Plants - 2549; Viruses - 3; Other Eukaryotes - 24583 (source: NCBI BLink). & (gnl|cdd|35283 : 571.0) no description available & (gnl|cdd|33918 : 474.0) no description available & (reliability: 1646.0) & (original description: Putative ABCC2, Description = ABC transporter D family member 2, chloroplastic, PFAM = PF00005;PF06472)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf07580_196420-227212' '(at5g58270 : 955.0) Encodes a mitochondrial half-molecule ABC transporter, a member of ATM subfamily. Mutants are dwarfed, chlorotic plants with altered leaf morphology. ATM3 transcription is induced by Cd(II) or Pb(II). Involved in heavy metal resistance. Arabidopsis thaliana has three ATM genes, namely ATM1, ATM2 and ATM3. Only ATM3 has an important function for plant growth. Role in Moco biosynthesis.; ABC transporter of the mitochondrion 3 (ATM3); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter of the mitochondrion 1 (TAIR:AT4G28630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35280 : 790.0) no description available & (gnl|cdd|34862 : 621.0) no description available & (q6yuu5|mdr_orysa : 220.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 1910.0) & (original description: Putative ABCB25, Description = ABC transporter B family member 25, mitochondrial, PFAM = PF00664;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf07608_336829-342213' '(at1g17840 : 524.0) Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix.; white-brown complex homolog protein 11 (WBC11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, fatty acid transporter activity; INVOLVED IN: cutin transport, fatty acid transport; LOCATED IN: plasma membrane, external side of plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G21090.1); Has 367567 Blast hits to 338203 proteins in 4071 species: Archae - 6733; Bacteria - 294034; Metazoa - 7509; Fungi - 6244; Plants - 5251; Viruses - 10; Other Eukaryotes - 47786 (source: NCBI BLink). & (gnl|cdd|35284 : 438.0) no description available & (gnl|cdd|72972 : 207.0) no description available & (q76cu2|pdr1_tobac : 177.0) Pleiotropic drug resistance protein 1 (NtPDR1) - Nicotiana tabacum (Common tobacco) & (reliability: 1048.0) & (original description: Putative ABCG15, Description = ABC transporter G family member 15, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf07783_157000-171224' '(at3g21090 : 518.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to karrikin; LOCATED IN: membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT1G51500.1); Has 380370 Blast hits to 349027 proteins in 4089 species: Archae - 6846; Bacteria - 303738; Metazoa - 8409; Fungi - 6671; Plants - 5430; Viruses - 12; Other Eukaryotes - 49264 (source: NCBI BLink). & (gnl|cdd|35284 : 242.0) no description available & (gnl|cdd|85216 : 103.0) no description available & (reliability: 1036.0) & (original description: Putative CER5, Description = ABC transporter G family member 15, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf07783_176005-185829' '(at3g21090 : 965.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to karrikin; LOCATED IN: membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT1G51500.1); Has 380370 Blast hits to 349027 proteins in 4089 species: Archae - 6846; Bacteria - 303738; Metazoa - 8409; Fungi - 6671; Plants - 5430; Viruses - 12; Other Eukaryotes - 49264 (source: NCBI BLink). & (gnl|cdd|35284 : 519.0) no description available & (gnl|cdd|72972 : 225.0) no description available & (q5w274|pdr3_tobac : 179.0) Pleiotropic drug resistance protein 3 (NtPDR3) - Nicotiana tabacum (Common tobacco) & (reliability: 1930.0) & (original description: Putative ABCG15, Description = ABC transporter G family member 15, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf07833_138535-144214' '(at3g59030 : 605.0) Encodes a proton antiporter. Involved in the transportation of proanthocyanidin precursors into the vacuole. In vitro transport experiments showed that cyanidin-3-O-glucoside (anthocyanin) was an effective substrate, whereas the proanthocyanidin precursor epicatechin was not transported. However catechin-3-O-glucoside inhibited anthocyanin transport in a dose-dependent manner suggesting that glycosylated epicatechin is the in vivo substrate. Recessive mutation has strong reduction of proanthocyanidin deposition in vacuoles and has reduced dormancy. Expressed in the endothelium of ovules and developing seeds.; TRANSPARENT TESTA 12 (TT12); CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT3G21690.1); Has 8592 Blast hits to 8553 proteins in 1935 species: Archae - 188; Bacteria - 5730; Metazoa - 144; Fungi - 324; Plants - 1347; Viruses - 0; Other Eukaryotes - 859 (source: NCBI BLink). & (gnl|cdd|36561 : 384.0) no description available & (gnl|cdd|30880 : 151.0) no description available & (reliability: 1210.0) & (original description: Putative DTX41, Description = Protein DETOXIFICATION 41, PFAM = PF01554;PF01554)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf08026_292016-304148' '(at1g32500 : 570.0) Encodes a member of a heterogenous group of non-intrinsic ATP-binding cassette (ABC) proteins. Members of this group bear no close resemblance to each other nor to representatives of specific ABC protein subfamilies from other organisms. This grouping is arbitrary and will likely change upon acquisition of further data.; non-intrinsic ABC protein 6 (NAP6); CONTAINS InterPro DOMAIN/s: SUF system FeS cluster assembly, SufBD (InterPro:IPR000825); BEST Arabidopsis thaliana protein match is: ATP binding cassette protein 1 (TAIR:AT4G04770.1); Has 9763 Blast hits to 9763 proteins in 1806 species: Archae - 246; Bacteria - 6215; Metazoa - 1; Fungi - 6; Plants - 107; Viruses - 0; Other Eukaryotes - 3188 (source: NCBI BLink). & (gnl|cdd|31063 : 199.0) no description available & (reliability: 1140.0) & (original description: Putative ABCI7, Description = Protein ABCI7, chloroplastic, PFAM = PF01458)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf08156_746731-749887' '(at4g31390 : 175.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G79600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative At4g31390, Description = Serine/Threonine kinase, ABC1 family protein, PFAM = )' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf08537_89887-95580' '(at4g27420 : 693.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: membrane; EXPRESSED IN: petal, leaf whorl, sepal, flower, egg cell; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 389492 Blast hits to 355855 proteins in 4126 species: Archae - 7031; Bacteria - 309319; Metazoa - 8330; Fungi - 6395; Plants - 5225; Viruses - 7; Other Eukaryotes - 53185 (source: NCBI BLink). & (gnl|cdd|35284 : 519.0) no description available & (gnl|cdd|72972 : 218.0) no description available & (q7fmw4|pdr15_orysa : 178.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 1386.0) & (original description: Putative ABCG9, Description = ABC transporter G family member 9, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf08590_120795-126153' '(at1g79600 : 973.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G71810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31005 : 400.0) no description available & (gnl|cdd|36449 : 374.0) no description available & (reliability: 1946.0) & (original description: Putative aarF, Description = ABC1-like kinase, PFAM = PF03109)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf08995_116397-161530' '(at2g41700 : 2549.0) ATP-binding cassette A1 (ABCA1); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, amino acid transmembrane transporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP-binding cassette A2 (TAIR:AT3G47730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35282 : 382.0) no description available & (gnl|cdd|73022 : 311.0) no description available & (q9g4f5|cysa_cucsa : 93.6) Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Cucumis sativus (Cucumber) & (reliability: 5098.0) & (original description: Putative ABCA1, Description = ABC transporter A family member 1, PFAM = PF00005;PF00005;PF12698;PF12698)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf09071_196754-208702' '(at1g04120 : 2295.0) encodes a high-affinity inositol hexakisphosphate transporter that plays a role in guard cell signaling and phytate storage. It is a member of MRP subfamily / ABC transporter subfamily C.; multidrug resistance-associated protein 5 (MRP5); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 3 (TAIR:AT3G13080.1). & (gnl|cdd|35277 : 1546.0) no description available & (gnl|cdd|73003 : 359.0) no description available & (q6yuu5|mdr_orysa : 119.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 4590.0) & (original description: Putative ABCC5, Description = ABC transporter C family member 5, PFAM = PF00664;PF00664;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf09489_48375-93521' '(at3g60160 : 1777.0) member of MRP subfamily; multidrug resistance-associated protein 9 (MRP9); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to nematode; LOCATED IN: integral to membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 15 (TAIR:AT3G60970.1); Has 679468 Blast hits to 355652 proteins in 3947 species: Archae - 12543; Bacteria - 548953; Metazoa - 12500; Fungi - 7906; Plants - 6622; Viruses - 19; Other Eukaryotes - 90925 (source: NCBI BLink). & (gnl|cdd|35277 : 1438.0) no description available & (gnl|cdd|73003 : 347.0) no description available & (q6yuu5|mdr_orysa : 201.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 3554.0) & (original description: Putative mrp2, Description = ABC transporter C family member 3, PFAM = PF00005;PF00005;PF00664;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf09489_84716-94377' '(at3g60160 : 1813.0) member of MRP subfamily; multidrug resistance-associated protein 9 (MRP9); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to nematode; LOCATED IN: integral to membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 15 (TAIR:AT3G60970.1); Has 679468 Blast hits to 355652 proteins in 3947 species: Archae - 12543; Bacteria - 548953; Metazoa - 12500; Fungi - 7906; Plants - 6622; Viruses - 19; Other Eukaryotes - 90925 (source: NCBI BLink). & (gnl|cdd|35277 : 1475.0) no description available & (gnl|cdd|73003 : 347.0) no description available & (q6yuu5|mdr_orysa : 124.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 3626.0) & (original description: Putative ABCC9, Description = ABC transporter C family member 9, PFAM = PF00664;PF00664;PF00005;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf10753_147327-150865' '(at4g23030 : 550.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: stem, male gametophyte, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G52050.1); Has 11257 Blast hits to 11210 proteins in 2068 species: Archae - 244; Bacteria - 8067; Metazoa - 149; Fungi - 328; Plants - 1302; Viruses - 0; Other Eukaryotes - 1167 (source: NCBI BLink). & (gnl|cdd|36561 : 397.0) no description available & (gnl|cdd|30880 : 170.0) no description available & (reliability: 1100.0) & (original description: Putative DTX49, Description = Protein DETOXIFICATION 49, PFAM = PF01554;PF01554)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf10881_43237-46107' '(at3g13220 : 155.0) Encodes a ATP-binding cassette transporter G26 (ABCG26) involved in tapetal cell and pollen development. Required for male fertility and pollen exine formation.; WBC27; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G52310.1); Has 402808 Blast hits to 366123 proteins in 4145 species: Archae - 7203; Bacteria - 319822; Metazoa - 8717; Fungi - 6492; Plants - 5411; Viruses - 13; Other Eukaryotes - 55150 (source: NCBI BLink). & (gnl|cdd|35284 : 140.0) no description available & (gnl|cdd|72993 : 99.0) no description available & (reliability: 310.0) & (original description: Putative WBC14, Description = White-brown-complex ABC transporter family protein, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf11401_165879-176870' '(at5g39040 : 835.0) Encodes a member of TAP subfamily of ABC transporters that is located in the vacuole. Mutants are hypersensitive to aluminum and the gene product may be important for intracellular movement of some substrate, possibly chelated Al, as part of a mechanism of aluminum sequestration.; transporter associated with antigen processing protein 2 (TAP2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to aluminum ion; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 11 (TAIR:AT1G02520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35281 : 700.0) no description available & (gnl|cdd|31327 : 450.0) no description available & (q6yuu5|mdr_orysa : 300.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 1670.0) & (original description: Putative mrpA, Description = ATP-binding cassette sub-family B member 10, mitochondrial, PFAM = PF00664;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf11443_126310-129677' '(at1g53270 : 701.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT2G13610.1); Has 412109 Blast hits to 371848 proteins in 4161 species: Archae - 7411; Bacteria - 324065; Metazoa - 9151; Fungi - 7073; Plants - 5804; Viruses - 6; Other Eukaryotes - 58599 (source: NCBI BLink). & (gnl|cdd|35284 : 528.0) no description available & (gnl|cdd|72972 : 214.0) no description available & (q5w274|pdr3_tobac : 184.0) Pleiotropic drug resistance protein 3 (NtPDR3) - Nicotiana tabacum (Common tobacco) & (reliability: 1402.0) & (original description: Putative ABCG10, Description = ABC transporter G family member 10, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf11969_25635-30942' '(at4g33460 : 308.0) member of NAP subfamily; ATNAP13; FUNCTIONS IN: transporter activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 12 (TAIR:AT1G02530.1); Has 407040 Blast hits to 369976 proteins in 3957 species: Archae - 7271; Bacteria - 322720; Metazoa - 9258; Fungi - 6631; Plants - 5055; Viruses - 23; Other Eukaryotes - 56082 (source: NCBI BLink). & (gnl|cdd|72984 : 208.0) no description available & (gnl|cdd|35278 : 180.0) no description available & (p56344|cysa_chlvu : 90.5) Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Chlorella vulgaris (Green alga) & (reliability: 616.0) & (original description: Putative ABCI10, Description = ABC transporter I family member 10, chloroplastic, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf11980_297926-310418' '(at2g01320 : 1045.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35284 : 522.0) no description available & (gnl|cdd|72972 : 242.0) no description available & (q8gu90|pdr3_orysa : 231.0) Pleiotropic drug resistance protein 3 - Oryza sativa (Rice) & (reliability: 2090.0) & (original description: Putative ABCG7, Description = ABC transporter G family member 7, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf12297_39491-43668' '(at3g55090 : 907.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to cyclopentenone; LOCATED IN: membrane; EXPRESSED IN: sepal, root, flower, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT2G39350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35284 : 583.0) no description available & (gnl|cdd|72993 : 219.0) no description available & (q8s628|pdr13_orysa : 201.0) Pleiotropic drug resistance protein 13 - Oryza sativa (Rice) & (reliability: 1814.0) & (original description: Putative ABCG16, Description = ABC transporter G family member 16, PFAM = PF01061;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf13029_163164-172866' '(q2pcf1|pdr2_nicpl : 1464.0) Pleiotropic drug resistance protein 2 (NpPDR2) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at2g36380 : 1461.0) pleiotropic drug resistance 6 (PDR6); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35288 : 1141.0) no description available & (gnl|cdd|72992 : 206.0) no description available & (reliability: 2922.0) & (original description: Putative ABC1, Description = Pleiotropic drug resistance protein 1, PFAM = PF08370;PF14510;PF00005;PF00005;PF01061;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf14374_126809-151739' '(gnl|cdd|35278 : 728.0) no description available & (at1g02520 : 722.0) P-glycoprotein 11 (PGP11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 12 (TAIR:AT1G02530.1); Has 844961 Blast hits to 391444 proteins in 4162 species: Archae - 14749; Bacteria - 659839; Metazoa - 18308; Fungi - 13140; Plants - 9783; Viruses - 35; Other Eukaryotes - 129107 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 463.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (gnl|cdd|31327 : 390.0) no description available & (reliability: 1444.0) & (original description: Putative mdr, Description = ABC transporter B family member 4, PFAM = PF00005;PF00005;PF00664;PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf14831_35722-42406' '(at5g14100 : 239.0) member of NAP subfamily; non-intrinsic ABC protein 14 (NAP14); FUNCTIONS IN: transporter activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT4G33460.1); Has 403186 Blast hits to 364909 proteins in 4058 species: Archae - 7357; Bacteria - 322932; Metazoa - 7473; Fungi - 4759; Plants - 4437; Viruses - 20; Other Eukaryotes - 56208 (source: NCBI BLink). & (gnl|cdd|72984 : 146.0) no description available & (gnl|cdd|35278 : 123.0) no description available & (reliability: 478.0) & (original description: Putative ABCI11, Description = ABC transporter I family member 11, chloroplastic, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf14831_35746-41129' '(at5g14100 : 272.0) member of NAP subfamily; non-intrinsic ABC protein 14 (NAP14); FUNCTIONS IN: transporter activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT4G33460.1); Has 403186 Blast hits to 364909 proteins in 4058 species: Archae - 7357; Bacteria - 322932; Metazoa - 7473; Fungi - 4759; Plants - 4437; Viruses - 20; Other Eukaryotes - 56208 (source: NCBI BLink). & (gnl|cdd|72984 : 157.0) no description available & (gnl|cdd|35278 : 135.0) no description available & (p56344|cysa_chlvu : 87.8) Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Chlorella vulgaris (Green alga) & (reliability: 544.0) & (original description: Putative sfuC, Description = ABC-type iron(III)-transport system ATPase component SfuC, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf14831_37243-42121' '(at5g14100 : 147.0) member of NAP subfamily; non-intrinsic ABC protein 14 (NAP14); FUNCTIONS IN: transporter activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT4G33460.1); Has 403186 Blast hits to 364909 proteins in 4058 species: Archae - 7357; Bacteria - 322932; Metazoa - 7473; Fungi - 4759; Plants - 4437; Viruses - 20; Other Eukaryotes - 56208 (source: NCBI BLink). & (gnl|cdd|72984 : 94.8) no description available & (gnl|cdd|35278 : 87.6) no description available & (reliability: 294.0) & (original description: Putative ecfA2, Description = ABC transporter I family member 11, chloroplastic, PFAM = PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf15166_90397-96221' '(at3g13220 : 963.0) Encodes a ATP-binding cassette transporter G26 (ABCG26) involved in tapetal cell and pollen development. Required for male fertility and pollen exine formation.; WBC27; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G52310.1); Has 402808 Blast hits to 366123 proteins in 4145 species: Archae - 7203; Bacteria - 319822; Metazoa - 8717; Fungi - 6492; Plants - 5411; Viruses - 13; Other Eukaryotes - 55150 (source: NCBI BLink). & (gnl|cdd|35284 : 517.0) no description available & (gnl|cdd|72993 : 229.0) no description available & (q5w274|pdr3_tobac : 175.0) Pleiotropic drug resistance protein 3 (NtPDR3) - Nicotiana tabacum (Common tobacco) & (reliability: 1926.0) & (original description: Putative ABCG26, Description = ABC transporter G family member 26, PFAM = PF00005;PF01061)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf15536_203126-213497' '(at1g64550 : 1090.0) member of GCN subfamily; general control non-repressible 3 (GCN3); FUNCTIONS IN: transporter activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT5G60790.1); Has 474431 Blast hits to 318649 proteins in 3825 species: Archae - 8686; Bacteria - 390426; Metazoa - 7720; Fungi - 5127; Plants - 4044; Viruses - 51; Other Eukaryotes - 58377 (source: NCBI BLink). & (gnl|cdd|35285 : 689.0) no description available & (gnl|cdd|30834 : 494.0) no description available & (reliability: 2180.0) & (original description: Putative ABCF3, Description = ABC transporter F family member 3, PFAM = PF00005;PF00005;PF12848)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf25488_77263-83176' '(at1g70610 : 516.0) member of TAP subfamily; transporter associated with antigen processing protein 1 (TAP1); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: transporter associated with antigen processing protein 2 (TAIR:AT5G39040.1); Has 433965 Blast hits to 389325 proteins in 4163 species: Archae - 7467; Bacteria - 334124; Metazoa - 10295; Fungi - 7727; Plants - 5683; Viruses - 22; Other Eukaryotes - 68647 (source: NCBI BLink). & (gnl|cdd|35281 : 278.0) no description available & (gnl|cdd|31327 : 139.0) no description available & (reliability: 1032.0) & (original description: Putative TAP1, Description = ABC transporter B family member 26, chloroplastic, PFAM = PF00664)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf30239_35696-42633' '(at5g06530 : 707.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G52310.1); Has 401964 Blast hits to 364471 proteins in 4136 species: Archae - 7187; Bacteria - 315702; Metazoa - 9377; Fungi - 6648; Plants - 5639; Viruses - 7; Other Eukaryotes - 57404 (source: NCBI BLink). & (gnl|cdd|35284 : 497.0) no description available & (gnl|cdd|72993 : 222.0) no description available & (q7fmw4|pdr15_orysa : 157.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 1414.0) & (original description: Putative ABCG22, Description = ABC transporter G family member 22, PFAM = PF01061;PF00005)' T '34.16' 'transport.ABC transporters and multidrug resistance systems' 'niben101scf31099_45472-56769' '(at5g39040 : 867.0) Encodes a member of TAP subfamily of ABC transporters that is located in the vacuole. Mutants are hypersensitive to aluminum and the gene product may be important for intracellular movement of some substrate, possibly chelated Al, as part of a mechanism of aluminum sequestration.; transporter associated with antigen processing protein 2 (TAP2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to aluminum ion; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 11 (TAIR:AT1G02520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35281 : 679.0) no description available & (gnl|cdd|31327 : 436.0) no description available & (q6yuu5|mdr_orysa : 289.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 1734.0) & (original description: Putative mrpA, Description = ATP-binding cassette sub-family B member 10, mitochondrial, PFAM = PF00005;PF00664)' T '34.17' 'transport.peroxisomes' 'niben044scf00000070ctg012_1158-14102' '(at2g39970 : 421.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, peroxisomal membrane, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: folate transporter 1 (TAIR:AT5G66380.1); Has 16603 Blast hits to 11434 proteins in 397 species: Archae - 0; Bacteria - 4; Metazoa - 7348; Fungi - 4678; Plants - 2931; Viruses - 0; Other Eukaryotes - 1642 (source: NCBI BLink). & (gnl|cdd|35988 : 285.0) no description available & (reliability: 842.0) & (original description: Putative PXN, Description = Peroxisomal nicotinamide adenine dinucleotide carrier, PFAM = PF00153;PF00153;PF00153)' T '34.17' 'transport.peroxisomes' 'niben101scf00193_375719-378768' '(at2g39970 : 338.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, peroxisomal membrane, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: folate transporter 1 (TAIR:AT5G66380.1); Has 16603 Blast hits to 11434 proteins in 397 species: Archae - 0; Bacteria - 4; Metazoa - 7348; Fungi - 4678; Plants - 2931; Viruses - 0; Other Eukaryotes - 1642 (source: NCBI BLink). & (gnl|cdd|35988 : 254.0) no description available & (reliability: 676.0) & (original description: Putative PXN, Description = Peroxisomal nicotinamide adenine dinucleotide carrier, PFAM = PF00153;PF00153;PF00153)' T '34.17' 'transport.peroxisomes' 'niben101scf02280_614556-626188' '(at2g39970 : 437.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, peroxisomal membrane, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: folate transporter 1 (TAIR:AT5G66380.1); Has 16603 Blast hits to 11434 proteins in 397 species: Archae - 0; Bacteria - 4; Metazoa - 7348; Fungi - 4678; Plants - 2931; Viruses - 0; Other Eukaryotes - 1642 (source: NCBI BLink). & (gnl|cdd|35988 : 293.0) no description available & (reliability: 874.0) & (original description: Putative PXN, Description = Peroxisomal nicotinamide adenine dinucleotide carrier, PFAM = PF00153;PF00153;PF00153)' T '34.17' 'transport.peroxisomes' 'niben101scf06293_347983-358529' '(at2g39970 : 448.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, peroxisomal membrane, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: folate transporter 1 (TAIR:AT5G66380.1); Has 16603 Blast hits to 11434 proteins in 397 species: Archae - 0; Bacteria - 4; Metazoa - 7348; Fungi - 4678; Plants - 2931; Viruses - 0; Other Eukaryotes - 1642 (source: NCBI BLink). & (gnl|cdd|35988 : 305.0) no description available & (reliability: 896.0) & (original description: Putative PXN, Description = Peroxisomal nicotinamide adenine dinucleotide carrier, PFAM = PF00153;PF00153;PF00153)' T '34.18' 'transport.unspecified anions' 'nbv0.3scaffold7720_47979-55374' '(at1g15460 : 891.0) Encodes a efflux-type boron transporter. Over-expression improved plant growth under B toxic conditions.; REQUIRES HIGH BORON 4 (BOR4); CONTAINS InterPro DOMAIN/s: Bicarbonate transporter, eukaryotic (InterPro:IPR003020), Bicarbonate transporter, C-terminal (InterPro:IPR011531); BEST Arabidopsis thaliana protein match is: HCO3- transporter family (TAIR:AT1G74810.1); Has 2623 Blast hits to 1400 proteins in 194 species: Archae - 0; Bacteria - 4; Metazoa - 1965; Fungi - 314; Plants - 231; Viruses - 2; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|36387 : 456.0) no description available & (gnl|cdd|85148 : 163.0) no description available & (reliability: 1782.0) & (original description: Putative BOR4, Description = Boron transporter 4, PFAM = PF00955;PF00955;PF00955)' T '34.18' 'transport.unspecified anions' 'nbv0.3scaffold9936_41218-47584' '(at3g62270 : 831.0) HCO3- transporter family; FUNCTIONS IN: anion exchanger activity; INVOLVED IN: anion transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bicarbonate transporter, eukaryotic (InterPro:IPR003020), Bicarbonate transporter, C-terminal (InterPro:IPR011531); BEST Arabidopsis thaliana protein match is: HCO3- transporter family (TAIR:AT2G47160.1); Has 2572 Blast hits to 1412 proteins in 199 species: Archae - 0; Bacteria - 14; Metazoa - 1904; Fungi - 316; Plants - 231; Viruses - 2; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|36387 : 333.0) no description available & (gnl|cdd|85148 : 126.0) no description available & (reliability: 1662.0) & (original description: Putative BOR2, Description = Probable boron transporter 2, PFAM = PF00955;PF00955)' T '34.18' 'transport.unspecified anions' 'nbv0.3scaffold43888_411-17435' '(at1g30450 : 1432.0) member of Cation-chloride co-transporter family; cation-chloride co-transporter 1 (CCC1); FUNCTIONS IN: sodium:potassium:chloride symporter activity, cation:chloride symporter activity; INVOLVED IN: transport, chloride transport, cation transport, sodium ion transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: root vascular system, root tip, cultured cell; CONTAINS InterPro DOMAIN/s: Amino acid permease domain (InterPro:IPR004841), Na/K/Cl co-transporter superfamily (InterPro:IPR004842); Has 4233 Blast hits to 3854 proteins in 900 species: Archae - 104; Bacteria - 2028; Metazoa - 1538; Fungi - 159; Plants - 142; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (gnl|cdd|37293 : 822.0) no description available & (gnl|cdd|84694 : 160.0) no description available & (reliability: 2864.0) & (original description: Putative CCC1, Description = Cation-chloride cotransporter 1, PFAM = PF00324;PF03522;PF03522)' T '34.18' 'transport.unspecified anions' 'nbv0.3scaffold70182_4698-9263' '(at1g30450 : 120.0) member of Cation-chloride co-transporter family; cation-chloride co-transporter 1 (CCC1); FUNCTIONS IN: sodium:potassium:chloride symporter activity, cation:chloride symporter activity; INVOLVED IN: transport, chloride transport, cation transport, sodium ion transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: root vascular system, root tip, cultured cell; CONTAINS InterPro DOMAIN/s: Amino acid permease domain (InterPro:IPR004841), Na/K/Cl co-transporter superfamily (InterPro:IPR004842); Has 4233 Blast hits to 3854 proteins in 900 species: Archae - 104; Bacteria - 2028; Metazoa - 1538; Fungi - 159; Plants - 142; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative CCC1, Description = Cation-chloride cotransporter 1, PFAM = )' T '34.18' 'transport.unspecified anions' 'nbv0.5scaffold770_336026-339498' '(at4g32510 : 200.0) HCO3- transporter family; FUNCTIONS IN: anion exchanger activity; INVOLVED IN: anion transport; LOCATED IN: integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Bicarbonate transporter, C-terminal (InterPro:IPR011531), Bicarbonate transporter, eukaryotic (InterPro:IPR003020); BEST Arabidopsis thaliana protein match is: HCO3- transporter family (TAIR:AT5G25430.1); Has 2374 Blast hits to 1394 proteins in 189 species: Archae - 0; Bacteria - 4; Metazoa - 1794; Fungi - 254; Plants - 226; Viruses - 1; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|36387 : 109.0) no description available & (reliability: 400.0) & (original description: Putative BOR1, Description = Boron transporter, PFAM = )' T '34.18' 'transport.unspecified anions' 'nbv0.5scaffold1696_193491-200217' '(at3g62270 : 1031.0) HCO3- transporter family; FUNCTIONS IN: anion exchanger activity; INVOLVED IN: anion transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bicarbonate transporter, eukaryotic (InterPro:IPR003020), Bicarbonate transporter, C-terminal (InterPro:IPR011531); BEST Arabidopsis thaliana protein match is: HCO3- transporter family (TAIR:AT2G47160.1); Has 2572 Blast hits to 1412 proteins in 199 species: Archae - 0; Bacteria - 14; Metazoa - 1904; Fungi - 316; Plants - 231; Viruses - 2; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|36387 : 451.0) no description available & (gnl|cdd|85148 : 159.0) no description available & (reliability: 2062.0) & (original description: Putative BOR2, Description = Probable boron transporter 2, PFAM = PF00955;PF00955;PF00955)' T '34.18' 'transport.unspecified anions' 'nbv0.5scaffold3999_68759-75435' '(at1g15460 : 889.0) Encodes a efflux-type boron transporter. Over-expression improved plant growth under B toxic conditions.; REQUIRES HIGH BORON 4 (BOR4); CONTAINS InterPro DOMAIN/s: Bicarbonate transporter, eukaryotic (InterPro:IPR003020), Bicarbonate transporter, C-terminal (InterPro:IPR011531); BEST Arabidopsis thaliana protein match is: HCO3- transporter family (TAIR:AT1G74810.1); Has 2623 Blast hits to 1400 proteins in 194 species: Archae - 0; Bacteria - 4; Metazoa - 1965; Fungi - 314; Plants - 231; Viruses - 2; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|36387 : 457.0) no description available & (gnl|cdd|85148 : 168.0) no description available & (reliability: 1778.0) & (original description: Putative BOR4, Description = Boron transporter 4, PFAM = PF00955;PF00955;PF00955)' T '34.18' 'transport.unspecified anions' 'nbv0.5scaffold4360_72036-112493' '(at4g35440 : 429.0) Enclodes a choride channel protein that is localized to the thlakoid membrane.; chloride channel E (CLC-E); FUNCTIONS IN: ion channel activity, voltage-gated chloride channel activity; INVOLVED IN: chloride transport, transmembrane transport; LOCATED IN: chloroplast thylakoid membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chloride channel, core (InterPro:IPR014743), Chloride channel, voltage gated (InterPro:IPR001807), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: chloride channel F (TAIR:AT1G55620.2). & (gnl|cdd|35696 : 249.0) no description available & (gnl|cdd|79359 : 191.0) no description available & (reliability: 858.0) & (original description: Putative CBSCLC1, Description = Chloride channel protein, PFAM = PF00654;PF00654;PF00571;PF00571)' T '34.18' 'transport.unspecified anions' 'nbv0.5scaffold6447_4983-11833' '(at5g49890 : 671.0) member of Anion channel protein family; chloride channel C (CLC-C); FUNCTIONS IN: anion channel activity, voltage-gated chloride channel activity; INVOLVED IN: chloride transport, transmembrane transport; LOCATED IN: plant-type vacuole membrane, intracellular, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chloride channel, core (InterPro:IPR014743), Chloride channel, voltage gated (InterPro:IPR001807), Chloride channel ClC-plant (InterPro:IPR002251), Cystathionine beta-synthase, core (InterPro:IPR000644), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); BEST Arabidopsis thaliana protein match is: Voltage-gated chloride channel family protein (TAIR:AT5G33280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35695 : 609.0) no description available & (gnl|cdd|79367 : 179.0) no description available & (reliability: 1342.0) & (original description: Putative Sb01g011250, Description = Chloride channel protein, PFAM = PF00571;PF00654)' T '34.18' 'transport.unspecified anions' 'niben044scf00015465ctg005_2736-6090' '(at5g62290 : 103.0) nucleotide-sensitive chloride conductance regulator (ICln) family protein; FUNCTIONS IN: ion channel activity; INVOLVED IN: cell volume homeostasis, chloride transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide-sensitive chloride conductance regulator (InterPro:IPR003521); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative icln1, Description = Nucleotide-sensitive chloride conductance regulator family protein, PFAM = PF03517)' T '34.18' 'transport.unspecified anions' 'niben044scf00036814ctg007_224-4787' '(at5g57490 : 164.0) Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol.; voltage dependent anion channel 4 (VDAC4); FUNCTIONS IN: voltage-gated anion channel activity; INVOLVED IN: response to bacterium, anion transport; LOCATED IN: mitochondrial outer membrane, mitochondrion, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Porin, eukaryotic type (InterPro:IPR001925); BEST Arabidopsis thaliana protein match is: voltage dependent anion channel 2 (TAIR:AT5G67500.1); Has 864 Blast hits to 864 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 407; Fungi - 143; Plants - 294; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (p42056|vdac2_soltu : 127.0) 36 kDa outer mitochondrial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) (POM 36) - Solanum tuberosum (Potato) & (gnl|cdd|38336 : 82.6) no description available & (reliability: 328.0) & (original description: Putative VDAC2, Description = Mitochondrial outer membrane protein porin 4, PFAM = PF01459)' T '34.18' 'transport.unspecified anions' 'niben044scf00036814ctg008_356-2659' '(at5g57490 : 129.0) Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol.; voltage dependent anion channel 4 (VDAC4); FUNCTIONS IN: voltage-gated anion channel activity; INVOLVED IN: response to bacterium, anion transport; LOCATED IN: mitochondrial outer membrane, mitochondrion, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Porin, eukaryotic type (InterPro:IPR001925); BEST Arabidopsis thaliana protein match is: voltage dependent anion channel 2 (TAIR:AT5G67500.1); Has 864 Blast hits to 864 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 407; Fungi - 143; Plants - 294; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (p42054|vdac_pea : 112.0) Outer plastidial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) - Pisum sativum (Garden pea) & (gnl|cdd|38336 : 90.0) no description available & (gnl|cdd|85468 : 80.4) no description available & (reliability: 258.0) & (original description: Putative POR1, Description = Voltage-dependent anion-selective channel protein, PFAM = PF01459)' T '34.18' 'transport.unspecified anions' 'niben044scf00051725ctg003_8042-16731' '(at4g35440 : 249.0) Enclodes a choride channel protein that is localized to the thlakoid membrane.; chloride channel E (CLC-E); FUNCTIONS IN: ion channel activity, voltage-gated chloride channel activity; INVOLVED IN: chloride transport, transmembrane transport; LOCATED IN: chloroplast thylakoid membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chloride channel, core (InterPro:IPR014743), Chloride channel, voltage gated (InterPro:IPR001807), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: chloride channel F (TAIR:AT1G55620.2). & (gnl|cdd|35696 : 103.0) no description available & (gnl|cdd|73092 : 92.7) no description available & (reliability: 498.0) & (original description: Putative CBSCLC3, Description = Chloride channel protein, PFAM = PF00571;PF00571;PF00654)' T '34.18' 'transport.unspecified anions' 'niben101scf00468_43727-50281' '(at3g62270 : 1061.0) HCO3- transporter family; FUNCTIONS IN: anion exchanger activity; INVOLVED IN: anion transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bicarbonate transporter, eukaryotic (InterPro:IPR003020), Bicarbonate transporter, C-terminal (InterPro:IPR011531); BEST Arabidopsis thaliana protein match is: HCO3- transporter family (TAIR:AT2G47160.1); Has 2572 Blast hits to 1412 proteins in 199 species: Archae - 0; Bacteria - 14; Metazoa - 1904; Fungi - 316; Plants - 231; Viruses - 2; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|36387 : 449.0) no description available & (gnl|cdd|85148 : 161.0) no description available & (reliability: 2122.0) & (original description: Putative BOR2, Description = Probable boron transporter 2, PFAM = PF00955;PF00955;PF00955)' T '34.18' 'transport.unspecified anions' 'niben101scf01061_70645-114272' '(at1g30450 : 1534.0) member of Cation-chloride co-transporter family; cation-chloride co-transporter 1 (CCC1); FUNCTIONS IN: sodium:potassium:chloride symporter activity, cation:chloride symporter activity; INVOLVED IN: transport, chloride transport, cation transport, sodium ion transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: root vascular system, root tip, cultured cell; CONTAINS InterPro DOMAIN/s: Amino acid permease domain (InterPro:IPR004841), Na/K/Cl co-transporter superfamily (InterPro:IPR004842); Has 4233 Blast hits to 3854 proteins in 900 species: Archae - 104; Bacteria - 2028; Metazoa - 1538; Fungi - 159; Plants - 142; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (gnl|cdd|37293 : 1039.0) no description available & (gnl|cdd|84694 : 169.0) no description available & (reliability: 3068.0) & (original description: Putative CCC1, Description = Cation-chloride cotransporter 1, PFAM = PF00324;PF03522;PF03522)' T '34.18' 'transport.unspecified anions' 'niben101scf01281_959765-986602' '(at1g30450 : 1551.0) member of Cation-chloride co-transporter family; cation-chloride co-transporter 1 (CCC1); FUNCTIONS IN: sodium:potassium:chloride symporter activity, cation:chloride symporter activity; INVOLVED IN: transport, chloride transport, cation transport, sodium ion transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: root vascular system, root tip, cultured cell; CONTAINS InterPro DOMAIN/s: Amino acid permease domain (InterPro:IPR004841), Na/K/Cl co-transporter superfamily (InterPro:IPR004842); Has 4233 Blast hits to 3854 proteins in 900 species: Archae - 104; Bacteria - 2028; Metazoa - 1538; Fungi - 159; Plants - 142; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (gnl|cdd|37293 : 828.0) no description available & (gnl|cdd|84694 : 171.0) no description available & (reliability: 3102.0) & (original description: Putative CCC1, Description = Cation-chloride cotransporter 1, PFAM = PF03522;PF03522;PF00324)' T '34.18' 'transport.unspecified anions' 'niben101scf01396_378254-384379' '(at4g32510 : 888.0) HCO3- transporter family; FUNCTIONS IN: anion exchanger activity; INVOLVED IN: anion transport; LOCATED IN: integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Bicarbonate transporter, C-terminal (InterPro:IPR011531), Bicarbonate transporter, eukaryotic (InterPro:IPR003020); BEST Arabidopsis thaliana protein match is: HCO3- transporter family (TAIR:AT5G25430.1); Has 2374 Blast hits to 1394 proteins in 189 species: Archae - 0; Bacteria - 4; Metazoa - 1794; Fungi - 254; Plants - 226; Viruses - 1; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|36387 : 440.0) no description available & (gnl|cdd|85148 : 161.0) no description available & (reliability: 1776.0) & (original description: Putative BOR4, Description = Boron transporter 4, PFAM = PF00955;PF00955;PF00955)' T '34.18' 'transport.unspecified anions' 'niben101scf01603_275198-283491' '(at3g62270 : 1031.0) HCO3- transporter family; FUNCTIONS IN: anion exchanger activity; INVOLVED IN: anion transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bicarbonate transporter, eukaryotic (InterPro:IPR003020), Bicarbonate transporter, C-terminal (InterPro:IPR011531); BEST Arabidopsis thaliana protein match is: HCO3- transporter family (TAIR:AT2G47160.1); Has 2572 Blast hits to 1412 proteins in 199 species: Archae - 0; Bacteria - 14; Metazoa - 1904; Fungi - 316; Plants - 231; Viruses - 2; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|36387 : 451.0) no description available & (gnl|cdd|85148 : 162.0) no description available & (reliability: 2062.0) & (original description: Putative BOR2, Description = Probable boron transporter 2, PFAM = PF00955;PF00955;PF00955)' T '34.18' 'transport.unspecified anions' 'niben101scf03004_223639-271184' '(at4g35440 : 643.0) Enclodes a choride channel protein that is localized to the thlakoid membrane.; chloride channel E (CLC-E); FUNCTIONS IN: ion channel activity, voltage-gated chloride channel activity; INVOLVED IN: chloride transport, transmembrane transport; LOCATED IN: chloroplast thylakoid membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chloride channel, core (InterPro:IPR014743), Chloride channel, voltage gated (InterPro:IPR001807), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: chloride channel F (TAIR:AT1G55620.2). & (gnl|cdd|35696 : 353.0) no description available & (gnl|cdd|79359 : 270.0) no description available & (reliability: 1286.0) & (original description: Putative CLC-E, Description = Chloride channel protein CLC-e, PFAM = PF00571;PF00571;PF00654)' T '34.18' 'transport.unspecified anions' 'niben101scf03298_251142-264103' '(at1g55620 : 831.0) Encodes a chloride channel protein that has been localized to the chloroplast and golgi apparatus. Complements yeast gef1 mutant and therefor may function to acidify the golgi lumen.; chloride channel F (CLC-F); FUNCTIONS IN: ion channel activity, voltage-gated chloride channel activity; INVOLVED IN: chloride transport, transmembrane transport; LOCATED IN: Golgi apparatus, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chloride channel, core (InterPro:IPR014743), Chloride channel, voltage gated (InterPro:IPR001807), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: chloride channel E (TAIR:AT4G35440.1); Has 8626 Blast hits to 8538 proteins in 2008 species: Archae - 276; Bacteria - 6042; Metazoa - 796; Fungi - 384; Plants - 229; Viruses - 0; Other Eukaryotes - 899 (source: NCBI BLink). & (gnl|cdd|79359 : 293.0) no description available & (gnl|cdd|35696 : 244.0) no description available & (reliability: 1662.0) & (original description: Putative CLC-F, Description = Chloride channel protein CLC-f, PFAM = PF00571;PF00571;PF00654)' T '34.18' 'transport.unspecified anions' 'niben101scf03733_143973-152844' '(at1g55620 : 843.0) Encodes a chloride channel protein that has been localized to the chloroplast and golgi apparatus. Complements yeast gef1 mutant and therefor may function to acidify the golgi lumen.; chloride channel F (CLC-F); FUNCTIONS IN: ion channel activity, voltage-gated chloride channel activity; INVOLVED IN: chloride transport, transmembrane transport; LOCATED IN: Golgi apparatus, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chloride channel, core (InterPro:IPR014743), Chloride channel, voltage gated (InterPro:IPR001807), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: chloride channel E (TAIR:AT4G35440.1); Has 8626 Blast hits to 8538 proteins in 2008 species: Archae - 276; Bacteria - 6042; Metazoa - 796; Fungi - 384; Plants - 229; Viruses - 0; Other Eukaryotes - 899 (source: NCBI BLink). & (gnl|cdd|79359 : 287.0) no description available & (gnl|cdd|35696 : 252.0) no description available & (reliability: 1686.0) & (original description: Putative CLC-F, Description = Chloride channel protein CLC-f, PFAM = PF00571;PF00654)' T '34.18' 'transport.unspecified anions' 'niben101scf03766_217294-223602' '(at3g27170 : 1065.0) member of Anion channel protein family; chloride channel B (CLC-B); FUNCTIONS IN: nitrate:hydrogen symporter activity, anion channel activity, voltage-gated chloride channel activity; INVOLVED IN: chloride transport, transmembrane transport; LOCATED IN: plant-type vacuole membrane, intracellular; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chloride channel, core (InterPro:IPR014743), Chloride channel, voltage gated (InterPro:IPR001807), Chloride channel ClC-plant (InterPro:IPR002251), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: chloride channel A (TAIR:AT5G40890.1); Has 6974 Blast hits to 6653 proteins in 1746 species: Archae - 129; Bacteria - 4490; Metazoa - 970; Fungi - 341; Plants - 365; Viruses - 0; Other Eukaryotes - 679 (source: NCBI BLink). & (gnl|cdd|35695 : 1004.0) no description available & (gnl|cdd|79367 : 503.0) no description available & (reliability: 2130.0) & (original description: Putative ClC1, Description = Chloride channel protein, PFAM = PF00654)' T '34.18' 'transport.unspecified anions' 'niben101scf04016_201778-209897' '(at5g33280 : 1103.0) Voltage-gated chloride channel family protein; FUNCTIONS IN: protein binding, anion channel activity, voltage-gated chloride channel activity; INVOLVED IN: chloride transport, transmembrane transport; LOCATED IN: intracellular, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chloride channel, core (InterPro:IPR014743), Chloride channel, voltage gated (InterPro:IPR001807), Chloride channel ClC-plant (InterPro:IPR002251), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: chloride channel C (TAIR:AT5G49890.1); Has 6777 Blast hits to 6308 proteins in 1692 species: Archae - 118; Bacteria - 4354; Metazoa - 967; Fungi - 343; Plants - 345; Viruses - 0; Other Eukaryotes - 650 (source: NCBI BLink). & (gnl|cdd|35695 : 941.0) no description available & (gnl|cdd|79367 : 440.0) no description available & (reliability: 2206.0) & (original description: Putative CBSCLC6, Description = Putative chloride channel-like protein CLC-g, PFAM = PF00654;PF00571)' T '34.18' 'transport.unspecified anions' 'niben101scf04370_9115-20450' '(at5g57490 : 324.0) Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol.; voltage dependent anion channel 4 (VDAC4); FUNCTIONS IN: voltage-gated anion channel activity; INVOLVED IN: response to bacterium, anion transport; LOCATED IN: mitochondrial outer membrane, mitochondrion, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Porin, eukaryotic type (InterPro:IPR001925); BEST Arabidopsis thaliana protein match is: voltage dependent anion channel 2 (TAIR:AT5G67500.1); Has 864 Blast hits to 864 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 407; Fungi - 143; Plants - 294; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (p42056|vdac2_soltu : 258.0) 36 kDa outer mitochondrial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) (POM 36) - Solanum tuberosum (Potato) & (gnl|cdd|38336 : 204.0) no description available & (gnl|cdd|85468 : 177.0) no description available & (reliability: 648.0) & (original description: Putative VDAC4, Description = Mitochondrial outer membrane protein porin 4, PFAM = PF01459)' T '34.18' 'transport.unspecified anions' 'niben101scf05601_69884-86373' '(at5g26240 : 1109.0) member of Anion channel protein family; chloride channel D (CLC-D); CONTAINS InterPro DOMAIN/s: Chloride channel, core (InterPro:IPR014743), Chloride channel, voltage gated (InterPro:IPR001807), Chloride channel ClC-plant (InterPro:IPR002251), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: chloride channel C (TAIR:AT5G49890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35695 : 905.0) no description available & (gnl|cdd|79367 : 455.0) no description available & (reliability: 2218.0) & (original description: Putative ClC1, Description = Chloride channel protein, PFAM = PF00654;PF00571;PF00571)' T '34.18' 'transport.unspecified anions' 'niben101scf06412_128326-134247' '(at3g62270 : 1036.0) HCO3- transporter family; FUNCTIONS IN: anion exchanger activity; INVOLVED IN: anion transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bicarbonate transporter, eukaryotic (InterPro:IPR003020), Bicarbonate transporter, C-terminal (InterPro:IPR011531); BEST Arabidopsis thaliana protein match is: HCO3- transporter family (TAIR:AT2G47160.1); Has 2572 Blast hits to 1412 proteins in 199 species: Archae - 0; Bacteria - 14; Metazoa - 1904; Fungi - 316; Plants - 231; Viruses - 2; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|36387 : 445.0) no description available & (gnl|cdd|85148 : 148.0) no description available & (reliability: 2072.0) & (original description: Putative BOR2, Description = Probable boron transporter 2, PFAM = PF00955;PF00955;PF00955)' T '34.18' 'transport.unspecified anions' 'niben101scf06579_192179-198299' '(at4g32510 : 888.0) HCO3- transporter family; FUNCTIONS IN: anion exchanger activity; INVOLVED IN: anion transport; LOCATED IN: integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Bicarbonate transporter, C-terminal (InterPro:IPR011531), Bicarbonate transporter, eukaryotic (InterPro:IPR003020); BEST Arabidopsis thaliana protein match is: HCO3- transporter family (TAIR:AT5G25430.1); Has 2374 Blast hits to 1394 proteins in 189 species: Archae - 0; Bacteria - 4; Metazoa - 1794; Fungi - 254; Plants - 226; Viruses - 1; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|36387 : 440.0) no description available & (gnl|cdd|85148 : 159.0) no description available & (reliability: 1776.0) & (original description: Putative BOR7, Description = Probable boron transporter 7, PFAM = PF00955;PF00955;PF00955)' T '34.18' 'transport.unspecified anions' 'niben101scf12414_68697-74827' '(at5g62290 : 228.0) nucleotide-sensitive chloride conductance regulator (ICln) family protein; FUNCTIONS IN: ion channel activity; INVOLVED IN: cell volume homeostasis, chloride transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide-sensitive chloride conductance regulator (InterPro:IPR003521); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38448 : 136.0) no description available & (reliability: 456.0) & (original description: Putative icln1, Description = Nucleotide-sensitive chloride conductance regulator family protein, PFAM = PF03517)' T '34.18' 'transport.unspecified anions' 'niben101scf18730_16564-25243' '(at5g49890 : 1037.0) member of Anion channel protein family; chloride channel C (CLC-C); FUNCTIONS IN: anion channel activity, voltage-gated chloride channel activity; INVOLVED IN: chloride transport, transmembrane transport; LOCATED IN: plant-type vacuole membrane, intracellular, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chloride channel, core (InterPro:IPR014743), Chloride channel, voltage gated (InterPro:IPR001807), Chloride channel ClC-plant (InterPro:IPR002251), Cystathionine beta-synthase, core (InterPro:IPR000644), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); BEST Arabidopsis thaliana protein match is: Voltage-gated chloride channel family protein (TAIR:AT5G33280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35695 : 958.0) no description available & (gnl|cdd|79367 : 470.0) no description available & (reliability: 2074.0) & (original description: Putative PGSC0003DMG400024904, Description = Chloride channel protein, PFAM = PF00571;PF00654)' T '34.18' 'transport.unspecified anions' 'niben101scf22590_96199-104278' '(at5g49890 : 1064.0) member of Anion channel protein family; chloride channel C (CLC-C); FUNCTIONS IN: anion channel activity, voltage-gated chloride channel activity; INVOLVED IN: chloride transport, transmembrane transport; LOCATED IN: plant-type vacuole membrane, intracellular, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chloride channel, core (InterPro:IPR014743), Chloride channel, voltage gated (InterPro:IPR001807), Chloride channel ClC-plant (InterPro:IPR002251), Cystathionine beta-synthase, core (InterPro:IPR000644), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); BEST Arabidopsis thaliana protein match is: Voltage-gated chloride channel family protein (TAIR:AT5G33280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35695 : 978.0) no description available & (gnl|cdd|79367 : 472.0) no description available & (reliability: 2128.0) & (original description: Putative ClC1, Description = Chloride channel protein, PFAM = PF00571;PF00654)' T '34.18.1' 'transport.unspecified anions.arsenite-transporting ATPase' 'nbv0.5scaffold4307_157146-161013' '(at3g10350 : 153.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: Anion-transporting ATPase (TAIR:AT5G60730.1). & (gnl|cdd|38036 : 112.0) no description available & (gnl|cdd|73214 : 86.1) no description available & (reliability: 306.0) & (original description: Putative ARSA, Description = Putative arsenical pump-driving ATPase, PFAM = PF02374)' T '34.18.1' 'transport.unspecified anions.arsenite-transporting ATPase' 'niben044scf00008657ctg016_252-12167' '(at1g01910 : 534.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: anion transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10350.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38036 : 426.0) no description available & (gnl|cdd|85974 : 326.0) no description available & (reliability: 1068.0) & (original description: Putative GET3, Description = ATPase GET3, PFAM = PF02374)' T '34.18.1' 'transport.unspecified anions.arsenite-transporting ATPase' 'niben044scf00020438ctg008_20198-28369' '(at3g10350 : 538.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: Anion-transporting ATPase (TAIR:AT5G60730.1). & (gnl|cdd|38036 : 327.0) no description available & (gnl|cdd|85974 : 242.0) no description available & (reliability: 1076.0) & (original description: Putative Sb04g028030, Description = Putative uncharacterized protein Sb04g028030, PFAM = PF02374)' T '34.18.1' 'transport.unspecified anions.arsenite-transporting ATPase' 'niben101scf00603_338060-346326' '(at1g01910 : 524.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: anion transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10350.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38036 : 424.0) no description available & (gnl|cdd|85974 : 324.0) no description available & (reliability: 1048.0) & (original description: Putative arsA, Description = ATPase ASNA1 homolog, PFAM = PF02374)' T '34.18.1' 'transport.unspecified anions.arsenite-transporting ATPase' 'niben101scf01933_1460645-1464717' '(at3g10350 : 155.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: Anion-transporting ATPase (TAIR:AT5G60730.1). & (gnl|cdd|38036 : 112.0) no description available & (gnl|cdd|73214 : 85.7) no description available & (reliability: 310.0) & (original description: Putative ARSA, Description = Putative arsenical pump-driving ATPase, PFAM = PF02374)' T '34.18.1' 'transport.unspecified anions.arsenite-transporting ATPase' 'niben101scf02523_61953-69139' '(at3g10350 : 499.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: Anion-transporting ATPase (TAIR:AT5G60730.1). & (gnl|cdd|38036 : 310.0) no description available & (gnl|cdd|85974 : 235.0) no description available & (reliability: 998.0) & (original description: Putative Sb04g028030, Description = Putative uncharacterized protein Sb04g028030, PFAM = PF02374)' T '34.18.1' 'transport.unspecified anions.arsenite-transporting ATPase' 'niben101scf02734_179995-189993' '(at1g01910 : 535.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: anion transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10350.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38036 : 429.0) no description available & (gnl|cdd|85974 : 330.0) no description available & (reliability: 1070.0) & (original description: Putative v1g161623, Description = ATPase ASNA1 homolog, PFAM = PF02374)' T '34.18.1' 'transport.unspecified anions.arsenite-transporting ATPase' 'niben101scf05632_2267-10510' '(at3g10350 : 493.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: Anion-transporting ATPase (TAIR:AT5G60730.1). & (gnl|cdd|38036 : 310.0) no description available & (gnl|cdd|85974 : 240.0) no description available & (reliability: 986.0) & (original description: Putative Sb04g028030, Description = Putative uncharacterized protein Sb04g028030, PFAM = PF02374)' T '34.18.1' 'transport.unspecified anions.arsenite-transporting ATPase' 'niben101scf06256_378134-386607' '(at3g10350 : 536.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: Anion-transporting ATPase (TAIR:AT5G60730.1). & (gnl|cdd|38036 : 328.0) no description available & (gnl|cdd|85974 : 241.0) no description available & (reliability: 1072.0) & (original description: Putative Sb04g028030, Description = Putative uncharacterized protein Sb04g028030, PFAM = PF02374)' T '34.18.1' 'transport.unspecified anions.arsenite-transporting ATPase' 'niben101scf08812_259104-271578' '(at1g01910 : 546.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: anion transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10350.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38036 : 432.0) no description available & (gnl|cdd|85974 : 333.0) no description available & (reliability: 1092.0) & (original description: Putative GET3, Description = ATPase GET3, PFAM = PF02374)' T '34.18.1' 'transport.unspecified anions.arsenite-transporting ATPase' 'niben101scf26890_1-9149' '(at1g01910 : 523.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: anion transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10350.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38036 : 420.0) no description available & (gnl|cdd|85974 : 322.0) no description available & (reliability: 1046.0) & (original description: Putative arsA, Description = ATPase ASNA1 homolog, PFAM = PF02374)' T '34.19' 'transport.Major Intrinsic Proteins' '' '' '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'nbv0.3scaffold73658_376-4114' '(q6eu94|pip11_orysa : 502.0) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a) (PIP1a) (OsPIP1.1) (Water channel protein RWC1) (RWC-1) - Oryza sativa (Rice) & (at4g00430 : 499.0) a member of the plasma membrane intrinsic protein subfamily PIP1.; TRANSMEMBRANE PROTEIN C (TMP-C); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84627 : 258.0) no description available & (gnl|cdd|35444 : 228.0) no description available & (reliability: 998.0) & (original description: Putative mipA, Description = Plasma membrane intrinsic protein, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'nbv0.3scaffold96663_1514-4465' '(gnl|cdd|35444 : 114.0) no description available & (gnl|cdd|29423 : 113.0) no description available & (at4g00430 : 80.9) a member of the plasma membrane intrinsic protein subfamily PIP1.; TRANSMEMBRANE PROTEIN C (TMP-C); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative 1, Description = X intrinsic protein, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'nbv0.5scaffold48_810530-1040175' '(q9sxf8|pip13_orysa : 222.0) Aquaporin PIP 1.3 (Plasma membrane intrinsic protein 1.3) (OsPIP1.3) (Water channel protein RWC3) (RWC-3) - Oryza sativa (Rice) & (at2g45960 : 219.0) a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development.; plasma membrane intrinsic protein 1B (PIP1B); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, response to salt stress, transport, water transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1;4 (TAIR:AT4G00430.1); Has 10384 Blast hits to 10346 proteins in 2170 species: Archae - 101; Bacteria - 5000; Metazoa - 1330; Fungi - 442; Plants - 2465; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink). & (gnl|cdd|84627 : 131.0) no description available & (gnl|cdd|35444 : 121.0) no description available & (reliability: 438.0) & (original description: Putative mipA, Description = Aquaporin, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'nbv0.5scaffold3027_223969-228704' '(at2g45960 : 496.0) a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development.; plasma membrane intrinsic protein 1B (PIP1B); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, response to salt stress, transport, water transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1;4 (TAIR:AT4G00430.1); Has 10384 Blast hits to 10346 proteins in 2170 species: Archae - 101; Bacteria - 5000; Metazoa - 1330; Fungi - 442; Plants - 2465; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink). & (q6eu94|pip11_orysa : 452.0) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a) (PIP1a) (OsPIP1.1) (Water channel protein RWC1) (RWC-1) - Oryza sativa (Rice) & (gnl|cdd|84627 : 243.0) no description available & (gnl|cdd|35444 : 213.0) no description available & (reliability: 992.0) & (original description: Putative AQP2, Description = Aquaporin, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'niben044scf00007994ctg017_2658-6229' '(gnl|cdd|35444 : 112.0) no description available & (gnl|cdd|84627 : 112.0) no description available & (at2g16850 : 81.6) plasma membrane intrinsic protein 2;8 (PIP2;8); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 3 (TAIR:AT4G35100.2); Has 11009 Blast hits to 10999 proteins in 2241 species: Archae - 81; Bacteria - 5232; Metazoa - 1475; Fungi - 457; Plants - 2523; Viruses - 2; Other Eukaryotes - 1239 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative XIP1, Description = X-intrinsic protein 12, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'niben044scf00012090ctg006_13287-15066' '(at2g16850 : 150.0) plasma membrane intrinsic protein 2;8 (PIP2;8); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 3 (TAIR:AT4G35100.2); Has 11009 Blast hits to 10999 proteins in 2241 species: Archae - 81; Bacteria - 5232; Metazoa - 1475; Fungi - 457; Plants - 2523; Viruses - 2; Other Eukaryotes - 1239 (source: NCBI BLink). & (q7xlr1|pip26_orysa : 146.0) Probable aquaporin PIP2.6 (Plasma membrane intrinsic protein 2.6) (OsPIP2.6) - Oryza sativa (Rice) & (gnl|cdd|84627 : 89.9) no description available & (reliability: 300.0) & (original description: Putative mipA, Description = Aquaporin, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'niben044scf00018582ctg003_394-3880' '(q6eu94|pip11_orysa : 261.0) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a) (PIP1a) (OsPIP1.1) (Water channel protein RWC1) (RWC-1) - Oryza sativa (Rice) & (at2g45960 : 258.0) a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development.; plasma membrane intrinsic protein 1B (PIP1B); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, response to salt stress, transport, water transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1;4 (TAIR:AT4G00430.1); Has 10384 Blast hits to 10346 proteins in 2170 species: Archae - 101; Bacteria - 5000; Metazoa - 1330; Fungi - 442; Plants - 2465; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink). & (gnl|cdd|84627 : 125.0) no description available & (gnl|cdd|35444 : 111.0) no description available & (reliability: 516.0) & (original description: Putative ATCP, Description = Aquaporin-like protein, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'niben044scf00020790ctg012_1-2982' '(gnl|cdd|35444 : 112.0) no description available & (gnl|cdd|84627 : 112.0) no description available & (at4g00430 : 80.1) a member of the plasma membrane intrinsic protein subfamily PIP1.; TRANSMEMBRANE PROTEIN C (TMP-C); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative XIP1, Description = X-intrinsic protein 12, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'niben044scf00046028ctg000_11412-15616' '(at2g37170 : 447.0) a member of the plasma membrane intrinsic protein subfamily PIP2. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed specifically in the vascular bundles and protein level increases slightly during leaf dev; plasma membrane intrinsic protein 2 (PIP2B); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, response to salt stress, transport, water transport; LOCATED IN: plasma membrane, chloroplast, membrane; EXPRESSED IN: root, cultured cell, callus; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: Aquaporin-like superfamily protein (TAIR:AT2G37180.1); Has 10851 Blast hits to 10838 proteins in 2234 species: Archae - 81; Bacteria - 5194; Metazoa - 1467; Fungi - 455; Plants - 2519; Viruses - 2; Other Eukaryotes - 1133 (source: NCBI BLink). & (q6k215|pip22_orysa : 436.0) Probable aquaporin PIP2.2 (Plasma membrane intrinsic protein 2.2) (OsPIP2.2) - Oryza sativa (Rice) & (gnl|cdd|84627 : 252.0) no description available & (gnl|cdd|35444 : 231.0) no description available & (reliability: 894.0) & (original description: Putative pip2, Description = Plasma membrane intrinsic protein 2, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'niben101scf00135_162544-166685' '(gnl|cdd|84627 : 116.0) no description available & (gnl|cdd|35444 : 112.0) no description available & (q6eu94|pip11_orysa : 91.3) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a) (PIP1a) (OsPIP1.1) (Water channel protein RWC1) (RWC-1) - Oryza sativa (Rice) & (at2g16850 : 90.1) plasma membrane intrinsic protein 2;8 (PIP2;8); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 3 (TAIR:AT4G35100.2); Has 11009 Blast hits to 10999 proteins in 2241 species: Archae - 81; Bacteria - 5232; Metazoa - 1475; Fungi - 457; Plants - 2523; Viruses - 2; Other Eukaryotes - 1239 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative XIP1, Description = X-intrinsic protein 12, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'niben101scf00883_1254561-1263009' '(gnl|cdd|84627 : 115.0) no description available & (gnl|cdd|35444 : 114.0) no description available & (at1g01620 : 84.0) a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development.; plasma membrane intrinsic protein 1C (PIP1C); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, response to salt stress, transport, water transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1;4 (TAIR:AT4G00430.1); Has 10489 Blast hits to 10479 proteins in 2194 species: Archae - 80; Bacteria - 5080; Metazoa - 1452; Fungi - 437; Plants - 2488; Viruses - 2; Other Eukaryotes - 950 (source: NCBI BLink). & (p61838|pip11_vicfa : 82.4) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a) (PIP1a) (Aquaporin 1) (Plasma membrane aquaporin 1) - Vicia faba (Broad bean) & (reliability: 168.0) & (original description: Putative XIP3, Description = X-intrisic protein subfamily member 31, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'niben101scf00883_1259312-1263028' '(gnl|cdd|84627 : 116.0) no description available & (gnl|cdd|35444 : 115.0) no description available & (at4g00430 : 84.3) a member of the plasma membrane intrinsic protein subfamily PIP1.; TRANSMEMBRANE PROTEIN C (TMP-C); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p61838|pip11_vicfa : 82.0) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a) (PIP1a) (Aquaporin 1) (Plasma membrane aquaporin 1) - Vicia faba (Broad bean) & (reliability: 168.6) & (original description: Putative XIP1, Description = X-intrinsic protein 12, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'niben101scf00988_74449-78294' '(at2g37170 : 434.0) a member of the plasma membrane intrinsic protein subfamily PIP2. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed specifically in the vascular bundles and protein level increases slightly during leaf dev; plasma membrane intrinsic protein 2 (PIP2B); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, response to salt stress, transport, water transport; LOCATED IN: plasma membrane, chloroplast, membrane; EXPRESSED IN: root, cultured cell, callus; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: Aquaporin-like superfamily protein (TAIR:AT2G37180.1); Has 10851 Blast hits to 10838 proteins in 2234 species: Archae - 81; Bacteria - 5194; Metazoa - 1467; Fungi - 455; Plants - 2519; Viruses - 2; Other Eukaryotes - 1133 (source: NCBI BLink). & (q6k215|pip22_orysa : 429.0) Probable aquaporin PIP2.2 (Plasma membrane intrinsic protein 2.2) (OsPIP2.2) - Oryza sativa (Rice) & (gnl|cdd|84627 : 248.0) no description available & (gnl|cdd|35444 : 230.0) no description available & (reliability: 868.0) & (original description: Putative pip2, Description = Aquaporin PIP2, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'niben101scf01337_146006-149776' '(q6eu94|pip11_orysa : 493.0) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a) (PIP1a) (OsPIP1.1) (Water channel protein RWC1) (RWC-1) - Oryza sativa (Rice) & (at4g00430 : 491.0) a member of the plasma membrane intrinsic protein subfamily PIP1.; TRANSMEMBRANE PROTEIN C (TMP-C); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84627 : 254.0) no description available & (gnl|cdd|35444 : 224.0) no description available & (reliability: 982.0) & (original description: Putative mipA, Description = Plasma membrane intrinsic protein, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'niben101scf01716_36209-40585' '(at2g45960 : 499.0) a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development.; plasma membrane intrinsic protein 1B (PIP1B); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, response to salt stress, transport, water transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1;4 (TAIR:AT4G00430.1); Has 10384 Blast hits to 10346 proteins in 2170 species: Archae - 101; Bacteria - 5000; Metazoa - 1330; Fungi - 442; Plants - 2465; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink). & (q6eu94|pip11_orysa : 449.0) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a) (PIP1a) (OsPIP1.1) (Water channel protein RWC1) (RWC-1) - Oryza sativa (Rice) & (gnl|cdd|84627 : 240.0) no description available & (gnl|cdd|35444 : 206.0) no description available & (reliability: 998.0) & (original description: Putative mipA, Description = Plasma membrane intrinsic protein, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'niben101scf01718_154009-158406' '(at4g35100 : 475.0) a member of the plasma membrane intrinsic protein PIP. functions as aquaporin. Salt-stress-inducible MIP; plasma membrane intrinsic protein 3 (PIP3); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 2;8 (TAIR:AT2G16850.1). & (q7xlr1|pip26_orysa : 443.0) Probable aquaporin PIP2.6 (Plasma membrane intrinsic protein 2.6) (OsPIP2.6) - Oryza sativa (Rice) & (gnl|cdd|84627 : 255.0) no description available & (gnl|cdd|35444 : 234.0) no description available & (reliability: 950.0) & (original description: Putative mipD, Description = Plasma membrane intrinsic protein, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'niben101scf01911_113300-116788' '(q6k215|pip22_orysa : 427.0) Probable aquaporin PIP2.2 (Plasma membrane intrinsic protein 2.2) (OsPIP2.2) - Oryza sativa (Rice) & (at2g37170 : 426.0) a member of the plasma membrane intrinsic protein subfamily PIP2. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed specifically in the vascular bundles and protein level increases slightly during leaf dev; plasma membrane intrinsic protein 2 (PIP2B); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, response to salt stress, transport, water transport; LOCATED IN: plasma membrane, chloroplast, membrane; EXPRESSED IN: root, cultured cell, callus; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: Aquaporin-like superfamily protein (TAIR:AT2G37180.1); Has 10851 Blast hits to 10838 proteins in 2234 species: Archae - 81; Bacteria - 5194; Metazoa - 1467; Fungi - 455; Plants - 2519; Viruses - 2; Other Eukaryotes - 1133 (source: NCBI BLink). & (gnl|cdd|84627 : 246.0) no description available & (gnl|cdd|35444 : 231.0) no description available & (reliability: 852.0) & (original description: Putative mipD, Description = Plasma membrane intrinsic protein, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'niben101scf02134_41918-46230' '(q6k215|pip22_orysa : 400.0) Probable aquaporin PIP2.2 (Plasma membrane intrinsic protein 2.2) (OsPIP2.2) - Oryza sativa (Rice) & (at2g37170 : 395.0) a member of the plasma membrane intrinsic protein subfamily PIP2. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed specifically in the vascular bundles and protein level increases slightly during leaf dev; plasma membrane intrinsic protein 2 (PIP2B); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, response to salt stress, transport, water transport; LOCATED IN: plasma membrane, chloroplast, membrane; EXPRESSED IN: root, cultured cell, callus; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: Aquaporin-like superfamily protein (TAIR:AT2G37180.1); Has 10851 Blast hits to 10838 proteins in 2234 species: Archae - 81; Bacteria - 5194; Metazoa - 1467; Fungi - 455; Plants - 2519; Viruses - 2; Other Eukaryotes - 1133 (source: NCBI BLink). & (gnl|cdd|84627 : 252.0) no description available & (gnl|cdd|35444 : 235.0) no description available & (reliability: 790.0) & (original description: Putative pip2, Description = Plasma membrane intrinsic protein, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'niben101scf02264_378967-557391' '(at2g45960 : 238.0) a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development.; plasma membrane intrinsic protein 1B (PIP1B); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, response to salt stress, transport, water transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1;4 (TAIR:AT4G00430.1); Has 10384 Blast hits to 10346 proteins in 2170 species: Archae - 101; Bacteria - 5000; Metazoa - 1330; Fungi - 442; Plants - 2465; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink). & (p61838|pip11_vicfa : 232.0) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a) (PIP1a) (Aquaporin 1) (Plasma membrane aquaporin 1) - Vicia faba (Broad bean) & (gnl|cdd|84627 : 141.0) no description available & (gnl|cdd|35444 : 121.0) no description available & (reliability: 476.0) & (original description: Putative PIP1, Description = Plasma membrane intrinsic protein 1, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'niben101scf02576_78961-86843' '(at4g00430 : 500.0) a member of the plasma membrane intrinsic protein subfamily PIP1.; TRANSMEMBRANE PROTEIN C (TMP-C); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6eu94|pip11_orysa : 494.0) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a) (PIP1a) (OsPIP1.1) (Water channel protein RWC1) (RWC-1) - Oryza sativa (Rice) & (gnl|cdd|84627 : 271.0) no description available & (gnl|cdd|35444 : 232.0) no description available & (reliability: 1000.0) & (original description: Putative mipA, Description = Plasma membrane intrinsic protein, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'niben101scf02658_615069-619278' '(gnl|cdd|35444 : 112.0) no description available & (gnl|cdd|84627 : 112.0) no description available & (at2g16850 : 82.0) plasma membrane intrinsic protein 2;8 (PIP2;8); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 3 (TAIR:AT4G35100.2); Has 11009 Blast hits to 10999 proteins in 2241 species: Archae - 81; Bacteria - 5232; Metazoa - 1475; Fungi - 457; Plants - 2523; Viruses - 2; Other Eukaryotes - 1239 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative XIP1, Description = X-intrinsic protein 12, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'niben101scf02658_615617-619309' '(gnl|cdd|35444 : 114.0) no description available & (gnl|cdd|84627 : 113.0) no description available & (at2g16850 : 81.3) plasma membrane intrinsic protein 2;8 (PIP2;8); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 3 (TAIR:AT4G35100.2); Has 11009 Blast hits to 10999 proteins in 2241 species: Archae - 81; Bacteria - 5232; Metazoa - 1475; Fungi - 457; Plants - 2523; Viruses - 2; Other Eukaryotes - 1239 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative XIP2, Description = X-intrisic protein subfamily member 21, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'niben101scf02827_513620-519680' '(at2g37170 : 448.0) a member of the plasma membrane intrinsic protein subfamily PIP2. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed specifically in the vascular bundles and protein level increases slightly during leaf dev; plasma membrane intrinsic protein 2 (PIP2B); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, response to salt stress, transport, water transport; LOCATED IN: plasma membrane, chloroplast, membrane; EXPRESSED IN: root, cultured cell, callus; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: Aquaporin-like superfamily protein (TAIR:AT2G37180.1); Has 10851 Blast hits to 10838 proteins in 2234 species: Archae - 81; Bacteria - 5194; Metazoa - 1467; Fungi - 455; Plants - 2519; Viruses - 2; Other Eukaryotes - 1133 (source: NCBI BLink). & (q6k215|pip22_orysa : 436.0) Probable aquaporin PIP2.2 (Plasma membrane intrinsic protein 2.2) (OsPIP2.2) - Oryza sativa (Rice) & (gnl|cdd|84627 : 254.0) no description available & (gnl|cdd|35444 : 231.0) no description available & (reliability: 896.0) & (original description: Putative pip2, Description = Plasma membrane intrinsic protein 2, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'niben101scf03947_76306-204261' '(at4g35100 : 430.0) a member of the plasma membrane intrinsic protein PIP. functions as aquaporin. Salt-stress-inducible MIP; plasma membrane intrinsic protein 3 (PIP3); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 2;8 (TAIR:AT2G16850.1). & (q7xlr1|pip26_orysa : 407.0) Probable aquaporin PIP2.6 (Plasma membrane intrinsic protein 2.6) (OsPIP2.6) - Oryza sativa (Rice) & (gnl|cdd|84627 : 250.0) no description available & (gnl|cdd|35444 : 226.0) no description available & (reliability: 860.0) & (original description: Putative PIP2, Description = Plasma membrane aquaporin, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'niben101scf04060_227881-242189' '(at4g35100 : 416.0) a member of the plasma membrane intrinsic protein PIP. functions as aquaporin. Salt-stress-inducible MIP; plasma membrane intrinsic protein 3 (PIP3); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 2;8 (TAIR:AT2G16850.1). & (q7xlr1|pip26_orysa : 398.0) Probable aquaporin PIP2.6 (Plasma membrane intrinsic protein 2.6) (OsPIP2.6) - Oryza sativa (Rice) & (gnl|cdd|84627 : 255.0) no description available & (gnl|cdd|35444 : 235.0) no description available & (reliability: 832.0) & (original description: Putative mipA, Description = Plasma membrane intrinsic protein, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'niben101scf06123_454622-458121' '(at3g53420 : 453.0) a member of the plasma membrane intrinsic protein subfamily PIP2. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed specifically in the vascular bundles and protein level increases slightly during leaf dev. When expressed in yeast cells can conduct hydrogen peroxide into those cells.; plasma membrane intrinsic protein 2A (PIP2A); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, response to salt stress, transport, hydrogen peroxide transmembrane transport, water transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 2 (TAIR:AT2G37170.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6k215|pip22_orysa : 448.0) Probable aquaporin PIP2.2 (Plasma membrane intrinsic protein 2.2) (OsPIP2.2) - Oryza sativa (Rice) & (gnl|cdd|84627 : 262.0) no description available & (gnl|cdd|35444 : 240.0) no description available & (reliability: 906.0) & (original description: Putative pip2, Description = Plasma membrane intrinsic protein 2, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'niben101scf06743_91665-96926' '(at4g00430 : 496.0) a member of the plasma membrane intrinsic protein subfamily PIP1.; TRANSMEMBRANE PROTEIN C (TMP-C); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6eu94|pip11_orysa : 486.0) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a) (PIP1a) (OsPIP1.1) (Water channel protein RWC1) (RWC-1) - Oryza sativa (Rice) & (gnl|cdd|84627 : 270.0) no description available & (gnl|cdd|35444 : 232.0) no description available & (reliability: 992.0) & (original description: Putative mipA, Description = Plasma membrane intrinsic protein, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'niben101scf10222_424853-431758' '(at4g00430 : 501.0) a member of the plasma membrane intrinsic protein subfamily PIP1.; TRANSMEMBRANE PROTEIN C (TMP-C); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6eu94|pip11_orysa : 493.0) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a) (PIP1a) (OsPIP1.1) (Water channel protein RWC1) (RWC-1) - Oryza sativa (Rice) & (gnl|cdd|84627 : 270.0) no description available & (gnl|cdd|35444 : 230.0) no description available & (reliability: 1002.0) & (original description: Putative mipA, Description = Plasma membrane intrinsic protein, PFAM = PF00230)' T '34.19.1' 'transport.Major Intrinsic Proteins.PIP' 'niben101scf34386_32060-36293' '(at4g35100 : 470.0) a member of the plasma membrane intrinsic protein PIP. functions as aquaporin. Salt-stress-inducible MIP; plasma membrane intrinsic protein 3 (PIP3); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 2;8 (TAIR:AT2G16850.1). & (q7xlr1|pip26_orysa : 438.0) Probable aquaporin PIP2.6 (Plasma membrane intrinsic protein 2.6) (OsPIP2.6) - Oryza sativa (Rice) & (gnl|cdd|84627 : 256.0) no description available & (gnl|cdd|35444 : 235.0) no description available & (reliability: 940.0) & (original description: Putative mipD, Description = Plasma membrane intrinsic protein, PFAM = PF00230)' T '34.19.2' 'transport.Major Intrinsic Proteins.TIP' 'nbv0.3scaffold15861_32077-38745' '(at3g47440 : 237.0) Encodes AtTIP5;1, functions as water and urea channels in pollen.; tonoplast intrinsic protein 5;1 (TIP5;1); FUNCTIONS IN: water channel activity, urea transmembrane transporter activity; INVOLVED IN: transport, urea transport; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: delta tonoplast integral protein (TAIR:AT3G16240.1); Has 9883 Blast hits to 9870 proteins in 2054 species: Archae - 82; Bacteria - 4603; Metazoa - 1430; Fungi - 328; Plants - 2424; Viruses - 0; Other Eukaryotes - 1016 (source: NCBI BLink). & (q7xu31|tip51_orysa : 196.0) Probable aquaporin TIP5.1 (Tonoplast intrinsic protein 5.1) (OsTIP5.1) - Oryza sativa (Rice) & (gnl|cdd|35444 : 181.0) no description available & (gnl|cdd|84627 : 177.0) no description available & (reliability: 474.0) & (original description: Putative aqp1, Description = Tonoplast intrinsic protein, PFAM = PF00230)' T '34.19.2' 'transport.Major Intrinsic Proteins.TIP' 'nbv0.3scaffold82382_2429-6338' '(at2g36830 : 232.0) Encodes a tonoplast intrinsic protein, which functions as water channel. It has also been shown to be able to facilitate the transport of urea and hydrogen peroxide. Highly expressed in vascular tissues of the root, stem, cauline leaves and flowers but not in the apical meristems.; gamma tonoplast intrinsic protein (GAMMA-TIP); FUNCTIONS IN: water channel activity, urea transmembrane transporter activity; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: tonoplast intrinsic protein 2 (TAIR:AT3G26520.1); Has 11016 Blast hits to 10983 proteins in 2213 species: Archae - 82; Bacteria - 5238; Metazoa - 1501; Fungi - 451; Plants - 2489; Viruses - 0; Other Eukaryotes - 1255 (source: NCBI BLink). & (p50156|tip11_orysa : 227.0) Probable aquaporin TIP1.1 (Tonoplast intrinsic protein 1.1) (OsTIP1.1) (rTIP1) - Oryza sativa (Rice) & (gnl|cdd|84627 : 129.0) no description available & (gnl|cdd|35444 : 127.0) no description available & (reliability: 464.0) & (original description: Putative TIP1, Description = Tonoplast intrinsic protein 11, PFAM = PF00230;PF00230)' T '34.19.2' 'transport.Major Intrinsic Proteins.TIP' 'nbv0.5scaffold13_191949-196281' '(at2g36830 : 329.0) Encodes a tonoplast intrinsic protein, which functions as water channel. It has also been shown to be able to facilitate the transport of urea and hydrogen peroxide. Highly expressed in vascular tissues of the root, stem, cauline leaves and flowers but not in the apical meristems.; gamma tonoplast intrinsic protein (GAMMA-TIP); FUNCTIONS IN: water channel activity, urea transmembrane transporter activity; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: tonoplast intrinsic protein 2 (TAIR:AT3G26520.1); Has 11016 Blast hits to 10983 proteins in 2213 species: Archae - 82; Bacteria - 5238; Metazoa - 1501; Fungi - 451; Plants - 2489; Viruses - 0; Other Eukaryotes - 1255 (source: NCBI BLink). & (p50156|tip11_orysa : 327.0) Probable aquaporin TIP1.1 (Tonoplast intrinsic protein 1.1) (OsTIP1.1) (rTIP1) - Oryza sativa (Rice) & (gnl|cdd|84627 : 210.0) no description available & (gnl|cdd|35444 : 198.0) no description available & (reliability: 658.0) & (original description: Putative aqp1, Description = Tonoplast intrinsic protein, PFAM = PF00230)' T '34.19.2' 'transport.Major Intrinsic Proteins.TIP' 'niben101scf00135_162544-166685' '(gnl|cdd|84627 : 116.0) no description available & (gnl|cdd|35444 : 112.0) no description available & (q6eu94|pip11_orysa : 91.3) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a) (PIP1a) (OsPIP1.1) (Water channel protein RWC1) (RWC-1) - Oryza sativa (Rice) & (at2g16850 : 90.1) plasma membrane intrinsic protein 2;8 (PIP2;8); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 3 (TAIR:AT4G35100.2); Has 11009 Blast hits to 10999 proteins in 2241 species: Archae - 81; Bacteria - 5232; Metazoa - 1475; Fungi - 457; Plants - 2523; Viruses - 2; Other Eukaryotes - 1239 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative XIP1, Description = X-intrinsic protein 12, PFAM = PF00230)' T '34.19.2' 'transport.Major Intrinsic Proteins.TIP' 'niben101scf00338_897769-900983' '(at1g17810 : 323.0) beta-tonoplast intrinsic protein (beta-TIP) mRNA, complete; beta-tonoplast intrinsic protein (BETA-TIP); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: Aquaporin-like superfamily protein (TAIR:AT1G73190.1); Has 10707 Blast hits to 10694 proteins in 2147 species: Archae - 83; Bacteria - 5023; Metazoa - 1508; Fungi - 447; Plants - 2508; Viruses - 2; Other Eukaryotes - 1136 (source: NCBI BLink). & (p23958|tipa_phavu : 296.0) Probable aquaporin TIP-type alpha (Tonoplast intrinsic protein alpha) (Alpha TIP) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|84627 : 231.0) no description available & (gnl|cdd|35444 : 205.0) no description available & (reliability: 646.0) & (original description: Putative aqp1, Description = Tonoplast intrinsic protein, PFAM = PF00230)' T '34.19.2' 'transport.Major Intrinsic Proteins.TIP' 'niben101scf00436_443997-449116' '(at2g36830 : 334.0) Encodes a tonoplast intrinsic protein, which functions as water channel. It has also been shown to be able to facilitate the transport of urea and hydrogen peroxide. Highly expressed in vascular tissues of the root, stem, cauline leaves and flowers but not in the apical meristems.; gamma tonoplast intrinsic protein (GAMMA-TIP); FUNCTIONS IN: water channel activity, urea transmembrane transporter activity; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: tonoplast intrinsic protein 2 (TAIR:AT3G26520.1); Has 11016 Blast hits to 10983 proteins in 2213 species: Archae - 82; Bacteria - 5238; Metazoa - 1501; Fungi - 451; Plants - 2489; Viruses - 0; Other Eukaryotes - 1255 (source: NCBI BLink). & (p50156|tip11_orysa : 334.0) Probable aquaporin TIP1.1 (Tonoplast intrinsic protein 1.1) (OsTIP1.1) (rTIP1) - Oryza sativa (Rice) & (gnl|cdd|84627 : 218.0) no description available & (gnl|cdd|35444 : 203.0) no description available & (reliability: 668.0) & (original description: Putative aqp1, Description = Tonoplast intrinsic protein, PFAM = PF00230)' T '34.19.2' 'transport.Major Intrinsic Proteins.TIP' 'niben101scf00688_273059-276372' '(p21653|tip1_tobac : 365.0) Probable aquaporin TIP-type RB7-5A (Tonoplast intrinsic protein, root-specific RB7-5A) (TobRB7) (RT-TIP) - Nicotiana tabacum (Common tobacco) & (at4g17340 : 317.0) tonoplast intrinsic protein 2;2 (TIP2;2); FUNCTIONS IN: water channel activity; INVOLVED IN: response to salt stress, transport; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: tonoplast intrinsic protein 2;3 (TAIR:AT5G47450.1); Has 10928 Blast hits to 10884 proteins in 2182 species: Archae - 82; Bacteria - 5178; Metazoa - 1485; Fungi - 421; Plants - 2525; Viruses - 2; Other Eukaryotes - 1235 (source: NCBI BLink). & (gnl|cdd|84627 : 212.0) no description available & (gnl|cdd|35444 : 203.0) no description available & (reliability: 634.0) & (original description: Putative aqp1, Description = Tonoplast intrinsic protein, PFAM = PF00230)' T '34.19.2' 'transport.Major Intrinsic Proteins.TIP' 'niben101scf00841_306801-310865' '(at2g36830 : 328.0) Encodes a tonoplast intrinsic protein, which functions as water channel. It has also been shown to be able to facilitate the transport of urea and hydrogen peroxide. Highly expressed in vascular tissues of the root, stem, cauline leaves and flowers but not in the apical meristems.; gamma tonoplast intrinsic protein (GAMMA-TIP); FUNCTIONS IN: water channel activity, urea transmembrane transporter activity; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: tonoplast intrinsic protein 2 (TAIR:AT3G26520.1); Has 11016 Blast hits to 10983 proteins in 2213 species: Archae - 82; Bacteria - 5238; Metazoa - 1501; Fungi - 451; Plants - 2489; Viruses - 0; Other Eukaryotes - 1255 (source: NCBI BLink). & (p50156|tip11_orysa : 327.0) Probable aquaporin TIP1.1 (Tonoplast intrinsic protein 1.1) (OsTIP1.1) (rTIP1) - Oryza sativa (Rice) & (gnl|cdd|84627 : 210.0) no description available & (gnl|cdd|35444 : 202.0) no description available & (reliability: 656.0) & (original description: Putative aqp1, Description = Tonoplast intrinsic protein, PFAM = PF00230)' T '34.19.2' 'transport.Major Intrinsic Proteins.TIP' 'niben101scf02003_169365-173522' '(at1g17810 : 328.0) beta-tonoplast intrinsic protein (beta-TIP) mRNA, complete; beta-tonoplast intrinsic protein (BETA-TIP); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: Aquaporin-like superfamily protein (TAIR:AT1G73190.1); Has 10707 Blast hits to 10694 proteins in 2147 species: Archae - 83; Bacteria - 5023; Metazoa - 1508; Fungi - 447; Plants - 2508; Viruses - 2; Other Eukaryotes - 1136 (source: NCBI BLink). & (p23958|tipa_phavu : 303.0) Probable aquaporin TIP-type alpha (Tonoplast intrinsic protein alpha) (Alpha TIP) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|84627 : 239.0) no description available & (gnl|cdd|35444 : 212.0) no description available & (reliability: 656.0) & (original description: Putative aqp1, Description = Tonoplast intrinsic protein, PFAM = PF00230)' T '34.19.2' 'transport.Major Intrinsic Proteins.TIP' 'niben101scf02502_786993-790307' '(at2g36830 : 311.0) Encodes a tonoplast intrinsic protein, which functions as water channel. It has also been shown to be able to facilitate the transport of urea and hydrogen peroxide. Highly expressed in vascular tissues of the root, stem, cauline leaves and flowers but not in the apical meristems.; gamma tonoplast intrinsic protein (GAMMA-TIP); FUNCTIONS IN: water channel activity, urea transmembrane transporter activity; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: tonoplast intrinsic protein 2 (TAIR:AT3G26520.1); Has 11016 Blast hits to 10983 proteins in 2213 species: Archae - 82; Bacteria - 5238; Metazoa - 1501; Fungi - 451; Plants - 2489; Viruses - 0; Other Eukaryotes - 1255 (source: NCBI BLink). & (p50156|tip11_orysa : 296.0) Probable aquaporin TIP1.1 (Tonoplast intrinsic protein 1.1) (OsTIP1.1) (rTIP1) - Oryza sativa (Rice) & (gnl|cdd|84627 : 222.0) no description available & (gnl|cdd|35444 : 209.0) no description available & (reliability: 622.0) & (original description: Putative aqp1, Description = Tonoplast intrinsic protein, PFAM = PF00230)' T '34.19.2' 'transport.Major Intrinsic Proteins.TIP' 'niben101scf02572_235068-238866' '(at3g16240 : 280.0) Delta tonoplast intrinsic protein, functions as a water channel and ammonium (NH3) transporter. Highly expressed in flower, shoot, and stem. Expression shows diurnal regulation and is induced by ammonium (NH3). Protein localized to vacuolar membrane.; delta tonoplast integral protein (DELTA-TIP); FUNCTIONS IN: water channel activity, ammonia transmembrane transporter activity, urea transmembrane transporter activity, methylammonium transmembrane transporter activity; INVOLVED IN: transport, urea transport, water transport; LOCATED IN: in 10 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: tonoplast intrinsic protein 2;3 (TAIR:AT5G47450.1); Has 10937 Blast hits to 10900 proteins in 2182 species: Archae - 87; Bacteria - 5160; Metazoa - 1503; Fungi - 423; Plants - 2497; Viruses - 0; Other Eukaryotes - 1267 (source: NCBI BLink). & (p21653|tip1_tobac : 268.0) Probable aquaporin TIP-type RB7-5A (Tonoplast intrinsic protein, root-specific RB7-5A) (TobRB7) (RT-TIP) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84627 : 213.0) no description available & (gnl|cdd|35444 : 204.0) no description available & (reliability: 560.0) & (original description: Putative aqp1, Description = Tonoplast intrinsic protein, PFAM = PF00230)' T '34.19.2' 'transport.Major Intrinsic Proteins.TIP' 'niben101scf03422_96833-100990' '(at3g16240 : 294.0) Delta tonoplast intrinsic protein, functions as a water channel and ammonium (NH3) transporter. Highly expressed in flower, shoot, and stem. Expression shows diurnal regulation and is induced by ammonium (NH3). Protein localized to vacuolar membrane.; delta tonoplast integral protein (DELTA-TIP); FUNCTIONS IN: water channel activity, ammonia transmembrane transporter activity, urea transmembrane transporter activity, methylammonium transmembrane transporter activity; INVOLVED IN: transport, urea transport, water transport; LOCATED IN: in 10 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: tonoplast intrinsic protein 2;3 (TAIR:AT5G47450.1); Has 10937 Blast hits to 10900 proteins in 2182 species: Archae - 87; Bacteria - 5160; Metazoa - 1503; Fungi - 423; Plants - 2497; Viruses - 0; Other Eukaryotes - 1267 (source: NCBI BLink). & (q5z6f0|tip22_orysa : 281.0) Probable aquaporin TIP2.2 (Tonoplast intrinsic protein 2.2) (OsTIP2.2) - Oryza sativa (Rice) & (gnl|cdd|84627 : 212.0) no description available & (gnl|cdd|35444 : 201.0) no description available & (reliability: 588.0) & (original description: Putative aqp1, Description = Tonoplast intrinsic protein, PFAM = PF00230)' T '34.19.2' 'transport.Major Intrinsic Proteins.TIP' 'niben101scf03755_1-3458' '(at3g16240 : 273.0) Delta tonoplast intrinsic protein, functions as a water channel and ammonium (NH3) transporter. Highly expressed in flower, shoot, and stem. Expression shows diurnal regulation and is induced by ammonium (NH3). Protein localized to vacuolar membrane.; delta tonoplast integral protein (DELTA-TIP); FUNCTIONS IN: water channel activity, ammonia transmembrane transporter activity, urea transmembrane transporter activity, methylammonium transmembrane transporter activity; INVOLVED IN: transport, urea transport, water transport; LOCATED IN: in 10 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: tonoplast intrinsic protein 2;3 (TAIR:AT5G47450.1); Has 10937 Blast hits to 10900 proteins in 2182 species: Archae - 87; Bacteria - 5160; Metazoa - 1503; Fungi - 423; Plants - 2497; Viruses - 0; Other Eukaryotes - 1267 (source: NCBI BLink). & (q5z6f0|tip22_orysa : 263.0) Probable aquaporin TIP2.2 (Tonoplast intrinsic protein 2.2) (OsTIP2.2) - Oryza sativa (Rice) & (gnl|cdd|84627 : 203.0) no description available & (gnl|cdd|35444 : 195.0) no description available & (reliability: 546.0) & (original description: Putative aqp1, Description = Tonoplast intrinsic protein, PFAM = PF00230)' T '34.19.2' 'transport.Major Intrinsic Proteins.TIP' 'niben101scf03772_310802-315996' '(p24422|tip2_tobac : 313.0) Probable aquaporin TIP-type RB7-18C (Tonoplast intrinsic protein, root-specific RB7-18C) (TobRB7) (RT-TIP) - Nicotiana tabacum (Common tobacco) & (at4g17340 : 289.0) tonoplast intrinsic protein 2;2 (TIP2;2); FUNCTIONS IN: water channel activity; INVOLVED IN: response to salt stress, transport; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: tonoplast intrinsic protein 2;3 (TAIR:AT5G47450.1); Has 10928 Blast hits to 10884 proteins in 2182 species: Archae - 82; Bacteria - 5178; Metazoa - 1485; Fungi - 421; Plants - 2525; Viruses - 2; Other Eukaryotes - 1235 (source: NCBI BLink). & (gnl|cdd|84627 : 220.0) no description available & (gnl|cdd|35444 : 206.0) no description available & (reliability: 578.0) & (original description: Putative aqp1, Description = Tonoplast intrinsic protein, PFAM = PF00230)' T '34.19.2' 'transport.Major Intrinsic Proteins.TIP' 'niben101scf06799_428963-433743' '(p50156|tip11_orysa : 332.0) Probable aquaporin TIP1.1 (Tonoplast intrinsic protein 1.1) (OsTIP1.1) (rTIP1) - Oryza sativa (Rice) & (at2g36830 : 329.0) Encodes a tonoplast intrinsic protein, which functions as water channel. It has also been shown to be able to facilitate the transport of urea and hydrogen peroxide. Highly expressed in vascular tissues of the root, stem, cauline leaves and flowers but not in the apical meristems.; gamma tonoplast intrinsic protein (GAMMA-TIP); FUNCTIONS IN: water channel activity, urea transmembrane transporter activity; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: tonoplast intrinsic protein 2 (TAIR:AT3G26520.1); Has 11016 Blast hits to 10983 proteins in 2213 species: Archae - 82; Bacteria - 5238; Metazoa - 1501; Fungi - 451; Plants - 2489; Viruses - 0; Other Eukaryotes - 1255 (source: NCBI BLink). & (gnl|cdd|84627 : 217.0) no description available & (gnl|cdd|35444 : 201.0) no description available & (reliability: 658.0) & (original description: Putative aqp1, Description = Tonoplast intrinsic protein, PFAM = PF00230)' T '34.19.2' 'transport.Major Intrinsic Proteins.TIP' 'niben101scf06969_216394-220159' '(at3g16240 : 282.0) Delta tonoplast intrinsic protein, functions as a water channel and ammonium (NH3) transporter. Highly expressed in flower, shoot, and stem. Expression shows diurnal regulation and is induced by ammonium (NH3). Protein localized to vacuolar membrane.; delta tonoplast integral protein (DELTA-TIP); FUNCTIONS IN: water channel activity, ammonia transmembrane transporter activity, urea transmembrane transporter activity, methylammonium transmembrane transporter activity; INVOLVED IN: transport, urea transport, water transport; LOCATED IN: in 10 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: tonoplast intrinsic protein 2;3 (TAIR:AT5G47450.1); Has 10937 Blast hits to 10900 proteins in 2182 species: Archae - 87; Bacteria - 5160; Metazoa - 1503; Fungi - 423; Plants - 2497; Viruses - 0; Other Eukaryotes - 1267 (source: NCBI BLink). & (q5z6f0|tip22_orysa : 262.0) Probable aquaporin TIP2.2 (Tonoplast intrinsic protein 2.2) (OsTIP2.2) - Oryza sativa (Rice) & (gnl|cdd|84627 : 208.0) no description available & (gnl|cdd|35444 : 203.0) no description available & (reliability: 564.0) & (original description: Putative aqp1, Description = Tonoplast intrinsic protein, PFAM = PF00230)' T '34.19.2' 'transport.Major Intrinsic Proteins.TIP' 'niben101scf11790_152361-155301' '(at4g01470 : 325.0) Encodes AtTIP1;3, functions as water and urea channels in pollen.; tonoplast intrinsic protein 1;3 (TIP1;3); FUNCTIONS IN: water channel activity, urea transmembrane transporter activity; INVOLVED IN: transport, urea transport, water transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: gamma tonoplast intrinsic protein (TAIR:AT2G36830.1); Has 10761 Blast hits to 10728 proteins in 2135 species: Archae - 83; Bacteria - 5069; Metazoa - 1488; Fungi - 435; Plants - 2488; Viruses - 0; Other Eukaryotes - 1198 (source: NCBI BLink). & (q94cs9|tip12_orysa : 314.0) Probable aquaporin TIP1.2 (Tonoplast intrinsic protein 1.2) (OsTIP1.2) - Oryza sativa (Rice) & (gnl|cdd|84627 : 214.0) no description available & (gnl|cdd|35444 : 201.0) no description available & (reliability: 650.0) & (original description: Putative tip, Description = Tonoplast intrinsic protein, PFAM = PF00230)' T '34.19.2' 'transport.Major Intrinsic Proteins.TIP' 'niben101scf15109_144557-148348' '(at2g25810 : 325.0) tonoplast intrinsic protein 4;1 (TIP4;1); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plant-type vacuole membrane, membrane, central vacuole; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: gamma tonoplast intrinsic protein (TAIR:AT2G36830.1); Has 10430 Blast hits to 10407 proteins in 2161 species: Archae - 84; Bacteria - 4945; Metazoa - 1471; Fungi - 406; Plants - 2499; Viruses - 0; Other Eukaryotes - 1025 (source: NCBI BLink). & (q75ga5|tip41_orysa : 242.0) Probable aquaporin TIP4.1 (Tonoplast intrinsic protein 4.1) (OsTIP4.1) - Oryza sativa (Rice) & (gnl|cdd|35444 : 203.0) no description available & (gnl|cdd|84627 : 200.0) no description available & (reliability: 650.0) & (original description: Putative aqp1, Description = Tonoplast intrinsic protein, PFAM = PF00230)' T '34.19.2' 'transport.Major Intrinsic Proteins.TIP' 'niben101scf20773_91261-94935' '(at3g47440 : 231.0) Encodes AtTIP5;1, functions as water and urea channels in pollen.; tonoplast intrinsic protein 5;1 (TIP5;1); FUNCTIONS IN: water channel activity, urea transmembrane transporter activity; INVOLVED IN: transport, urea transport; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: delta tonoplast integral protein (TAIR:AT3G16240.1); Has 9883 Blast hits to 9870 proteins in 2054 species: Archae - 82; Bacteria - 4603; Metazoa - 1430; Fungi - 328; Plants - 2424; Viruses - 0; Other Eukaryotes - 1016 (source: NCBI BLink). & (p24422|tip2_tobac : 193.0) Probable aquaporin TIP-type RB7-18C (Tonoplast intrinsic protein, root-specific RB7-18C) (TobRB7) (RT-TIP) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35444 : 179.0) no description available & (gnl|cdd|84627 : 175.0) no description available & (reliability: 462.0) & (original description: Putative aqp1, Description = Tonoplast intrinsic protein, PFAM = PF00230)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'nbv0.3scaffold16034_33411-38509' '(at1g31880 : 337.0) Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. BRX encodes a key regulator of cell proliferation and elongation in the root, which has been implicated in the brassinosteroid (BR) pathway as well as regulation of auxin-responsive gene expression. Also involved in cytokinin-mediated inhibition of lateral root initiation. A loss-of-function allele, named brx-2 in Rodrigues et al. (2009) Plant Physiol. but changed to brx-3 to resolve nomenclature conflict (Li et al. Planta 2009:229(3):593-603), shows enhanced response to ABA-mediated inhibition of root growth.; BREVIS RADIX (BRX); CONTAINS InterPro DOMAIN/s: Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591); BEST Arabidopsis thaliana protein match is: BREVIS RADIX-like 1 (TAIR:AT2G35600.1); Has 707 Blast hits to 407 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 705; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 674.0) & (original description: Putative BRX, Description = Protein BREVIS RADIX, PFAM = PF08381;PF08381)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'nbv0.3scaffold19579_30510-34311' '(at5g37820 : 347.0) NOD26-like intrinsic protein 4;2 (NIP4;2); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 4;1 (TAIR:AT5G37810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p08995|no26_soybn : 277.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (gnl|cdd|35444 : 205.0) no description available & (gnl|cdd|29423 : 173.0) no description available & (reliability: 670.0) & (original description: Putative mip4, Description = Major intrinsic protein (MIP) family transporter, PFAM = PF00230)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'nbv0.3scaffold27446_7659-11735' '(at1g31880 : 298.0) Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. BRX encodes a key regulator of cell proliferation and elongation in the root, which has been implicated in the brassinosteroid (BR) pathway as well as regulation of auxin-responsive gene expression. Also involved in cytokinin-mediated inhibition of lateral root initiation. A loss-of-function allele, named brx-2 in Rodrigues et al. (2009) Plant Physiol. but changed to brx-3 to resolve nomenclature conflict (Li et al. Planta 2009:229(3):593-603), shows enhanced response to ABA-mediated inhibition of root growth.; BREVIS RADIX (BRX); CONTAINS InterPro DOMAIN/s: Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591); BEST Arabidopsis thaliana protein match is: BREVIS RADIX-like 1 (TAIR:AT2G35600.1); Has 707 Blast hits to 407 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 705; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 596.0) & (original description: Putative BRX, Description = Protein BREVIS RADIX, PFAM = PF13713;PF08381;PF08381)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'nbv0.3scaffold46202_9445-16063' '(at4g18910 : 345.0) Encodes an aquaporin homolog. Functions in arsenite transport and tolerance.When expressed in yeast cells can conduct hydrogen peroxide into those cells.; NOD26-like intrinsic protein 1;2 (NIP1;2); FUNCTIONS IN: water channel activity, arsenite transmembrane transporter activity; INVOLVED IN: transport, hydrogen peroxide transmembrane transport, response to arsenic, arsenite transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like major intrinsic protein 1 (TAIR:AT4G19030.1); Has 10753 Blast hits to 10647 proteins in 2223 species: Archae - 110; Bacteria - 5339; Metazoa - 1367; Fungi - 450; Plants - 2101; Viruses - 4; Other Eukaryotes - 1382 (source: NCBI BLink). & (p08995|no26_soybn : 329.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (gnl|cdd|35444 : 221.0) no description available & (gnl|cdd|84627 : 188.0) no description available & (reliability: 690.0) & (original description: Putative NIP1, Description = Nodulin 26-like intrinsic protein 11, PFAM = PF00230)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'nbv0.3scaffold48348_6863-13751' '(at4g10380 : 307.0) Boric acid channel. Essential for efficient boron uptake and plant development under boron limitation. Also functions in arsenite transport and tolerance. Localized preferentially in outer membrane domains of root cells.; NOD26-like intrinsic protein 5;1 (NIP5;1); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 6;1 (TAIR:AT1G80760.1); Has 10572 Blast hits to 10477 proteins in 2169 species: Archae - 110; Bacteria - 5205; Metazoa - 1362; Fungi - 448; Plants - 2368; Viruses - 0; Other Eukaryotes - 1079 (source: NCBI BLink). & (gnl|cdd|35444 : 197.0) no description available & (p08995|no26_soybn : 165.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (gnl|cdd|84627 : 150.0) no description available & (reliability: 614.0) & (original description: Putative rMIP1, Description = Major intrinsic protein (MIP) family transporter, PFAM = PF00230)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'nbv0.3scaffold53087_6609-9058' '(at2g35600 : 132.0) Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity.; BREVIS RADIX-like 1 (BRXL1); CONTAINS InterPro DOMAIN/s: Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591); BEST Arabidopsis thaliana protein match is: DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein (TAIR:AT1G31880.1); Has 628 Blast hits to 410 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 628; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative BRX, Description = AtBRX, PFAM = PF08381)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'nbv0.5scaffold2463_44057-50981' '(at4g18910 : 352.0) Encodes an aquaporin homolog. Functions in arsenite transport and tolerance.When expressed in yeast cells can conduct hydrogen peroxide into those cells.; NOD26-like intrinsic protein 1;2 (NIP1;2); FUNCTIONS IN: water channel activity, arsenite transmembrane transporter activity; INVOLVED IN: transport, hydrogen peroxide transmembrane transport, response to arsenic, arsenite transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like major intrinsic protein 1 (TAIR:AT4G19030.1); Has 10753 Blast hits to 10647 proteins in 2223 species: Archae - 110; Bacteria - 5339; Metazoa - 1367; Fungi - 450; Plants - 2101; Viruses - 4; Other Eukaryotes - 1382 (source: NCBI BLink). & (p08995|no26_soybn : 335.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (gnl|cdd|35444 : 221.0) no description available & (gnl|cdd|84627 : 188.0) no description available & (reliability: 704.0) & (original description: Putative mip4, Description = Major intrinsic protein (MIP) family transporter, PFAM = PF00230)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'niben044scf00009858ctg000_181-5513' '(at1g80760 : 364.0) Encodes a protein with boron transporter activity. It helps to preferentially direct boron to young developing tissues in the shoot, such as immature leaves, under low boron conditions. This boron channel appears to be impermeable to water, unlike the closely related NIP5;1 boron transporter. This protein also allows the transport of glycerol, urea, and formimide but not larger uncharged solutes such as arabitol and sucrose when it is expressed heterologously.; NOD26-like intrinsic protein 6;1 (NIP6;1); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 5;1 (TAIR:AT4G10380.1); Has 10266 Blast hits to 10221 proteins in 2131 species: Archae - 103; Bacteria - 5136; Metazoa - 1354; Fungi - 440; Plants - 2031; Viruses - 2; Other Eukaryotes - 1200 (source: NCBI BLink). & (gnl|cdd|35444 : 215.0) no description available & (p08995|no26_soybn : 204.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (gnl|cdd|29423 : 162.0) no description available & (reliability: 728.0) & (original description: Putative mip4, Description = Major intrinsic protein (MIP) family transporter, PFAM = PF00230)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'niben044scf00021955ctg007_516-4685' '(at3g06100 : 220.0) NOD26-like intrinsic protein 7;1 (NIP7;1); FUNCTIONS IN: water channel activity; INVOLVED IN: transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 4;1 (TAIR:AT5G37810.1); Has 10571 Blast hits to 10316 proteins in 2159 species: Archae - 111; Bacteria - 5379; Metazoa - 1383; Fungi - 439; Plants - 2077; Viruses - 4; Other Eukaryotes - 1178 (source: NCBI BLink). & (q6z2t3|lsi1_orysa : 166.0) Silicon transporter LSI1 (Low silicon protein 1) - Oryza sativa (Rice) & (gnl|cdd|35444 : 164.0) no description available & (gnl|cdd|29423 : 148.0) no description available & (reliability: 440.0) & (original description: Putative mip4, Description = 1, PFAM = PF00230)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'niben101ctg16058_1-4331' '(at4g18910 : 217.0) Encodes an aquaporin homolog. Functions in arsenite transport and tolerance.When expressed in yeast cells can conduct hydrogen peroxide into those cells.; NOD26-like intrinsic protein 1;2 (NIP1;2); FUNCTIONS IN: water channel activity, arsenite transmembrane transporter activity; INVOLVED IN: transport, hydrogen peroxide transmembrane transport, response to arsenic, arsenite transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like major intrinsic protein 1 (TAIR:AT4G19030.1); Has 10753 Blast hits to 10647 proteins in 2223 species: Archae - 110; Bacteria - 5339; Metazoa - 1367; Fungi - 450; Plants - 2101; Viruses - 4; Other Eukaryotes - 1382 (source: NCBI BLink). & (p08995|no26_soybn : 215.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (gnl|cdd|35444 : 144.0) no description available & (gnl|cdd|84627 : 129.0) no description available & (reliability: 434.0) & (original description: Putative NIP1, Description = Noduline-like intrinsic protein 12, PFAM = PF00230)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'niben101scf00339_1597206-1606183' '(q6z2t3|lsi1_orysa : 316.0) Silicon transporter LSI1 (Low silicon protein 1) - Oryza sativa (Rice) & (at4g18910 : 234.0) Encodes an aquaporin homolog. Functions in arsenite transport and tolerance.When expressed in yeast cells can conduct hydrogen peroxide into those cells.; NOD26-like intrinsic protein 1;2 (NIP1;2); FUNCTIONS IN: water channel activity, arsenite transmembrane transporter activity; INVOLVED IN: transport, hydrogen peroxide transmembrane transport, response to arsenic, arsenite transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like major intrinsic protein 1 (TAIR:AT4G19030.1); Has 10753 Blast hits to 10647 proteins in 2223 species: Archae - 110; Bacteria - 5339; Metazoa - 1367; Fungi - 450; Plants - 2101; Viruses - 4; Other Eukaryotes - 1382 (source: NCBI BLink). & (gnl|cdd|35444 : 194.0) no description available & (gnl|cdd|29423 : 161.0) no description available & (reliability: 468.0) & (original description: Putative mip4, Description = 1, PFAM = PF00230)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'niben101scf00579_28559-33539' '(at5g37820 : 338.0) NOD26-like intrinsic protein 4;2 (NIP4;2); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 4;1 (TAIR:AT5G37810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p08995|no26_soybn : 263.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (gnl|cdd|35444 : 201.0) no description available & (gnl|cdd|29423 : 164.0) no description available & (reliability: 656.0) & (original description: Putative mip4, Description = Major intrinsic protein (MIP) family transporter, PFAM = PF00230)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'niben101scf00579_37827-41171' '(at5g37820 : 127.0) NOD26-like intrinsic protein 4;2 (NIP4;2); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 4;1 (TAIR:AT5G37810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p08995|no26_soybn : 107.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (gnl|cdd|35444 : 89.1) no description available & (gnl|cdd|29423 : 85.2) no description available & (reliability: 248.0) & (original description: Putative rMIP1, Description = Major intrinsic protein (MIP) family transporter, PFAM = PF00230)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'niben101scf00613_122350-127486' '(at4g18910 : 318.0) Encodes an aquaporin homolog. Functions in arsenite transport and tolerance.When expressed in yeast cells can conduct hydrogen peroxide into those cells.; NOD26-like intrinsic protein 1;2 (NIP1;2); FUNCTIONS IN: water channel activity, arsenite transmembrane transporter activity; INVOLVED IN: transport, hydrogen peroxide transmembrane transport, response to arsenic, arsenite transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like major intrinsic protein 1 (TAIR:AT4G19030.1); Has 10753 Blast hits to 10647 proteins in 2223 species: Archae - 110; Bacteria - 5339; Metazoa - 1367; Fungi - 450; Plants - 2101; Viruses - 4; Other Eukaryotes - 1382 (source: NCBI BLink). & (p08995|no26_soybn : 317.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (gnl|cdd|35444 : 239.0) no description available & (gnl|cdd|84627 : 195.0) no description available & (reliability: 636.0) & (original description: Putative mip4, Description = Major intrinsic protein (MIP) family transporter, PFAM = PF00230)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'niben101scf01145_217173-228232' '(at1g31880 : 345.0) Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. BRX encodes a key regulator of cell proliferation and elongation in the root, which has been implicated in the brassinosteroid (BR) pathway as well as regulation of auxin-responsive gene expression. Also involved in cytokinin-mediated inhibition of lateral root initiation. A loss-of-function allele, named brx-2 in Rodrigues et al. (2009) Plant Physiol. but changed to brx-3 to resolve nomenclature conflict (Li et al. Planta 2009:229(3):593-603), shows enhanced response to ABA-mediated inhibition of root growth.; BREVIS RADIX (BRX); CONTAINS InterPro DOMAIN/s: Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591); BEST Arabidopsis thaliana protein match is: BREVIS RADIX-like 1 (TAIR:AT2G35600.1); Has 707 Blast hits to 407 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 705; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 690.0) & (original description: Putative BRX, Description = Protein BREVIS RADIX, PFAM = PF13713;PF08381;PF08381)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'niben101scf02751_418607-422131' '(at4g19030 : 218.0) an aquaporin whose expression level is reduced by ABA, NaCl, dark, and dessication. is expressed at relatively low levels under normal conditions. Also functions in arsenite transport and tolerance.; NOD26-like major intrinsic protein 1 (NLM1); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 1;2 (TAIR:AT4G18910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p08995|no26_soybn : 218.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (gnl|cdd|35444 : 193.0) no description available & (gnl|cdd|84627 : 165.0) no description available & (reliability: 436.0) & (original description: Putative rMIP1, Description = Major intrinsic protein (MIP) family transporter, PFAM = PF00230)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'niben101scf02759_114182-124352' '(at1g31880 : 340.0) Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. BRX encodes a key regulator of cell proliferation and elongation in the root, which has been implicated in the brassinosteroid (BR) pathway as well as regulation of auxin-responsive gene expression. Also involved in cytokinin-mediated inhibition of lateral root initiation. A loss-of-function allele, named brx-2 in Rodrigues et al. (2009) Plant Physiol. but changed to brx-3 to resolve nomenclature conflict (Li et al. Planta 2009:229(3):593-603), shows enhanced response to ABA-mediated inhibition of root growth.; BREVIS RADIX (BRX); CONTAINS InterPro DOMAIN/s: Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591); BEST Arabidopsis thaliana protein match is: BREVIS RADIX-like 1 (TAIR:AT2G35600.1); Has 707 Blast hits to 407 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 705; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 680.0) & (original description: Putative BRX, Description = Protein BREVIS RADIX, PFAM = PF08381;PF08381;PF13713)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'niben101scf03641_700361-708987' '(at1g31880 : 345.0) Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. BRX encodes a key regulator of cell proliferation and elongation in the root, which has been implicated in the brassinosteroid (BR) pathway as well as regulation of auxin-responsive gene expression. Also involved in cytokinin-mediated inhibition of lateral root initiation. A loss-of-function allele, named brx-2 in Rodrigues et al. (2009) Plant Physiol. but changed to brx-3 to resolve nomenclature conflict (Li et al. Planta 2009:229(3):593-603), shows enhanced response to ABA-mediated inhibition of root growth.; BREVIS RADIX (BRX); CONTAINS InterPro DOMAIN/s: Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591); BEST Arabidopsis thaliana protein match is: BREVIS RADIX-like 1 (TAIR:AT2G35600.1); Has 707 Blast hits to 407 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 705; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 690.0) & (original description: Putative BRXL1, Description = Protein Brevis radix-like 1, PFAM = PF13713;PF08381;PF08381)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'niben101scf04100_57555-60234' '(at4g18910 : 119.0) Encodes an aquaporin homolog. Functions in arsenite transport and tolerance.When expressed in yeast cells can conduct hydrogen peroxide into those cells.; NOD26-like intrinsic protein 1;2 (NIP1;2); FUNCTIONS IN: water channel activity, arsenite transmembrane transporter activity; INVOLVED IN: transport, hydrogen peroxide transmembrane transport, response to arsenic, arsenite transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like major intrinsic protein 1 (TAIR:AT4G19030.1); Has 10753 Blast hits to 10647 proteins in 2223 species: Archae - 110; Bacteria - 5339; Metazoa - 1367; Fungi - 450; Plants - 2101; Viruses - 4; Other Eukaryotes - 1382 (source: NCBI BLink). & (p08995|no26_soybn : 103.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (reliability: 238.0) & (original description: Putative 1, Description = Aquaporin NIP1-2, PFAM = PF00230)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'niben101scf04845_121359-129342' '(at5g37820 : 340.0) NOD26-like intrinsic protein 4;2 (NIP4;2); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 4;1 (TAIR:AT5G37810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p08995|no26_soybn : 290.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (gnl|cdd|35444 : 218.0) no description available & (gnl|cdd|84627 : 184.0) no description available & (reliability: 674.0) & (original description: Putative mip4, Description = Major intrinsic protein (MIP) family transporter, PFAM = PF00230)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'niben101scf05948_200973-208043' '(at4g18910 : 332.0) Encodes an aquaporin homolog. Functions in arsenite transport and tolerance.When expressed in yeast cells can conduct hydrogen peroxide into those cells.; NOD26-like intrinsic protein 1;2 (NIP1;2); FUNCTIONS IN: water channel activity, arsenite transmembrane transporter activity; INVOLVED IN: transport, hydrogen peroxide transmembrane transport, response to arsenic, arsenite transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like major intrinsic protein 1 (TAIR:AT4G19030.1); Has 10753 Blast hits to 10647 proteins in 2223 species: Archae - 110; Bacteria - 5339; Metazoa - 1367; Fungi - 450; Plants - 2101; Viruses - 4; Other Eukaryotes - 1382 (source: NCBI BLink). & (p08995|no26_soybn : 305.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (gnl|cdd|35444 : 233.0) no description available & (gnl|cdd|29423 : 195.0) no description available & (reliability: 664.0) & (original description: Putative mip4, Description = Major intrinsic protein (MIP) family transporter, PFAM = PF00230)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'niben101scf06091_43745-56494' '(at1g80760 : 342.0) Encodes a protein with boron transporter activity. It helps to preferentially direct boron to young developing tissues in the shoot, such as immature leaves, under low boron conditions. This boron channel appears to be impermeable to water, unlike the closely related NIP5;1 boron transporter. This protein also allows the transport of glycerol, urea, and formimide but not larger uncharged solutes such as arabitol and sucrose when it is expressed heterologously.; NOD26-like intrinsic protein 6;1 (NIP6;1); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 5;1 (TAIR:AT4G10380.1); Has 10266 Blast hits to 10221 proteins in 2131 species: Archae - 103; Bacteria - 5136; Metazoa - 1354; Fungi - 440; Plants - 2031; Viruses - 2; Other Eukaryotes - 1200 (source: NCBI BLink). & (gnl|cdd|35444 : 214.0) no description available & (p08995|no26_soybn : 187.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (gnl|cdd|29423 : 161.0) no description available & (reliability: 684.0) & (original description: Putative mip4, Description = Major intrinsic protein (MIP) family transporter, PFAM = PF00230)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'niben101scf06376_338016-378911' '(at5g37820 : 325.0) NOD26-like intrinsic protein 4;2 (NIP4;2); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 4;1 (TAIR:AT5G37810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p08995|no26_soybn : 269.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (gnl|cdd|35444 : 202.0) no description available & (gnl|cdd|84627 : 171.0) no description available & (reliability: 636.0) & (original description: Putative NIP1, Description = Noduline-like intrinsic protein 13, PFAM = PF00230)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'niben101scf06677_130412-142552' '(at1g31880 : 301.0) Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. BRX encodes a key regulator of cell proliferation and elongation in the root, which has been implicated in the brassinosteroid (BR) pathway as well as regulation of auxin-responsive gene expression. Also involved in cytokinin-mediated inhibition of lateral root initiation. A loss-of-function allele, named brx-2 in Rodrigues et al. (2009) Plant Physiol. but changed to brx-3 to resolve nomenclature conflict (Li et al. Planta 2009:229(3):593-603), shows enhanced response to ABA-mediated inhibition of root growth.; BREVIS RADIX (BRX); CONTAINS InterPro DOMAIN/s: Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591); BEST Arabidopsis thaliana protein match is: BREVIS RADIX-like 1 (TAIR:AT2G35600.1); Has 707 Blast hits to 407 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 705; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 602.0) & (original description: Putative BRX, Description = Protein BREVIS RADIX, PFAM = PF13713;PF08381;PF08381)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'niben101scf06976_257789-262698' '(at1g80760 : 306.0) Encodes a protein with boron transporter activity. It helps to preferentially direct boron to young developing tissues in the shoot, such as immature leaves, under low boron conditions. This boron channel appears to be impermeable to water, unlike the closely related NIP5;1 boron transporter. This protein also allows the transport of glycerol, urea, and formimide but not larger uncharged solutes such as arabitol and sucrose when it is expressed heterologously.; NOD26-like intrinsic protein 6;1 (NIP6;1); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 5;1 (TAIR:AT4G10380.1); Has 10266 Blast hits to 10221 proteins in 2131 species: Archae - 103; Bacteria - 5136; Metazoa - 1354; Fungi - 440; Plants - 2031; Viruses - 2; Other Eukaryotes - 1200 (source: NCBI BLink). & (q6z2t3|lsi1_orysa : 191.0) Silicon transporter LSI1 (Low silicon protein 1) - Oryza sativa (Rice) & (gnl|cdd|35444 : 187.0) no description available & (gnl|cdd|84627 : 141.0) no description available & (reliability: 612.0) & (original description: Putative mip4, Description = Major intrinsic protein (MIP) family transporter, PFAM = PF00230)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'niben101scf06976_258748-263290' '(at1g80760 : 367.0) Encodes a protein with boron transporter activity. It helps to preferentially direct boron to young developing tissues in the shoot, such as immature leaves, under low boron conditions. This boron channel appears to be impermeable to water, unlike the closely related NIP5;1 boron transporter. This protein also allows the transport of glycerol, urea, and formimide but not larger uncharged solutes such as arabitol and sucrose when it is expressed heterologously.; NOD26-like intrinsic protein 6;1 (NIP6;1); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 5;1 (TAIR:AT4G10380.1); Has 10266 Blast hits to 10221 proteins in 2131 species: Archae - 103; Bacteria - 5136; Metazoa - 1354; Fungi - 440; Plants - 2031; Viruses - 2; Other Eukaryotes - 1200 (source: NCBI BLink). & (gnl|cdd|35444 : 212.0) no description available & (p08995|no26_soybn : 203.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (gnl|cdd|84627 : 160.0) no description available & (reliability: 734.0) & (original description: Putative mip4, Description = Major intrinsic protein (MIP) family transporter, PFAM = PF00230)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'niben101scf08199_301817-310292' '(at4g10380 : 363.0) Boric acid channel. Essential for efficient boron uptake and plant development under boron limitation. Also functions in arsenite transport and tolerance. Localized preferentially in outer membrane domains of root cells.; NOD26-like intrinsic protein 5;1 (NIP5;1); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 6;1 (TAIR:AT1G80760.1); Has 10572 Blast hits to 10477 proteins in 2169 species: Archae - 110; Bacteria - 5205; Metazoa - 1362; Fungi - 448; Plants - 2368; Viruses - 0; Other Eukaryotes - 1079 (source: NCBI BLink). & (gnl|cdd|35444 : 211.0) no description available & (p08995|no26_soybn : 170.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (gnl|cdd|84627 : 160.0) no description available & (reliability: 726.0) & (original description: Putative rMIP1, Description = Major intrinsic protein (MIP) family transporter, PFAM = PF00230)' T '34.19.3' 'transport.Major Intrinsic Proteins.NIP' 'niben101scf39176_17400-21356' '(at3g06100 : 218.0) NOD26-like intrinsic protein 7;1 (NIP7;1); FUNCTIONS IN: water channel activity; INVOLVED IN: transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 4;1 (TAIR:AT5G37810.1); Has 10571 Blast hits to 10316 proteins in 2159 species: Archae - 111; Bacteria - 5379; Metazoa - 1383; Fungi - 439; Plants - 2077; Viruses - 4; Other Eukaryotes - 1178 (source: NCBI BLink). & (gnl|cdd|35444 : 166.0) no description available & (q6z2t3|lsi1_orysa : 162.0) Silicon transporter LSI1 (Low silicon protein 1) - Oryza sativa (Rice) & (gnl|cdd|29423 : 148.0) no description available & (reliability: 436.0) & (original description: Putative mip4, Description = Aquaporin NIP1-2, PFAM = PF00230)' T '34.19.4' 'transport.Major Intrinsic Proteins.SIP' 'nbv0.3scaffold46165_493-3233' '(at3g56950 : 264.0) One of the Major Intrinsic Proteins(MIPs) which facilitate the passive transport of small molecules across membranes.Belongs to a family of plant aquaporins.Similar to yeast and radish aquaporins. Located on ER.; small and basic intrinsic protein 2;1 (SIP2;1); FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: Aquaporin-like superfamily protein (TAIR:AT5G18290.2). & (gnl|cdd|35444 : 94.9) no description available & (reliability: 528.0) & (original description: Putative 1, Description = Aquaporin SIP2-1, PFAM = PF00230)' T '34.19.4' 'transport.Major Intrinsic Proteins.SIP' 'niben044scf00023200ctg003_17394-22892' '(at3g04090 : 180.0) Belongs to a family of plant aquaporins. Similar to yeast and radish aquaporins. Located on ER.; small and basic intrinsic protein 1A (SIP1A); FUNCTIONS IN: water channel activity; INVOLVED IN: transport; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: Aquaporin-like superfamily protein (TAIR:AT5G18290.2); Has 2436 Blast hits to 2434 proteins in 334 species: Archae - 16; Bacteria - 100; Metazoa - 613; Fungi - 43; Plants - 1566; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (gnl|cdd|35444 : 111.0) no description available & (reliability: 360.0) & (original description: Putative 1, Description = Aquaporin SIP1-1, PFAM = PF00230)' T '34.19.4' 'transport.Major Intrinsic Proteins.SIP' 'niben044scf00037845ctg004_7446-10299' '(at3g56950 : 271.0) One of the Major Intrinsic Proteins(MIPs) which facilitate the passive transport of small molecules across membranes.Belongs to a family of plant aquaporins.Similar to yeast and radish aquaporins. Located on ER.; small and basic intrinsic protein 2;1 (SIP2;1); FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: Aquaporin-like superfamily protein (TAIR:AT5G18290.2). & (gnl|cdd|35444 : 100.0) no description available & (reliability: 542.0) & (original description: Putative 1, Description = Aquaporin SIP2-1, PFAM = PF00230)' T '34.19.4' 'transport.Major Intrinsic Proteins.SIP' 'niben101scf03279_149219-156094' '(at3g04090 : 171.0) Belongs to a family of plant aquaporins. Similar to yeast and radish aquaporins. Located on ER.; small and basic intrinsic protein 1A (SIP1A); FUNCTIONS IN: water channel activity; INVOLVED IN: transport; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: Aquaporin-like superfamily protein (TAIR:AT5G18290.2); Has 2436 Blast hits to 2434 proteins in 334 species: Archae - 16; Bacteria - 100; Metazoa - 613; Fungi - 43; Plants - 1566; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (gnl|cdd|35444 : 112.0) no description available & (reliability: 342.0) & (original description: Putative 1, Description = Aquaporin SIP1-1, PFAM = PF00230)' T '34.19.4' 'transport.Major Intrinsic Proteins.SIP' 'niben101scf13391_122282-125001' '(at3g56950 : 271.0) One of the Major Intrinsic Proteins(MIPs) which facilitate the passive transport of small molecules across membranes.Belongs to a family of plant aquaporins.Similar to yeast and radish aquaporins. Located on ER.; small and basic intrinsic protein 2;1 (SIP2;1); FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: Aquaporin-like superfamily protein (TAIR:AT5G18290.2). & (gnl|cdd|35444 : 101.0) no description available & (reliability: 542.0) & (original description: Putative 1, Description = Aquaporin SIP2-1, PFAM = PF00230)' T '34.19.4' 'transport.Major Intrinsic Proteins.SIP' 'niben101scf23427_12872-19337' '(at5g18290 : 183.0) Belongs to a family of plant aquaporins.Similar to yeast and radish aquaporins. Located on ER; SIP1;2; FUNCTIONS IN: water channel activity; INVOLVED IN: transport; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: small and basic intrinsic protein 1A (TAIR:AT3G04090.1). & (gnl|cdd|35444 : 116.0) no description available & (reliability: 366.0) & (original description: Putative 1, Description = Aquaporin SIP1-1, PFAM = PF00230)' T '34.19.99' 'transport.Major Intrinsic Proteins.unspecified' 'nbv0.3scaffold19579_30510-34311' '(at5g37820 : 347.0) NOD26-like intrinsic protein 4;2 (NIP4;2); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 4;1 (TAIR:AT5G37810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p08995|no26_soybn : 277.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (gnl|cdd|35444 : 205.0) no description available & (gnl|cdd|29423 : 173.0) no description available & (reliability: 694.0) & (original description: Putative mip4, Description = Major intrinsic protein (MIP) family transporter, PFAM = PF00230)' T '34.19.99' 'transport.Major Intrinsic Proteins.unspecified' 'niben101scf00339_1597206-1606183' '(q6z2t3|lsi1_orysa : 316.0) Silicon transporter LSI1 (Low silicon protein 1) - Oryza sativa (Rice) & (at4g18910 : 234.0) Encodes an aquaporin homolog. Functions in arsenite transport and tolerance.When expressed in yeast cells can conduct hydrogen peroxide into those cells.; NOD26-like intrinsic protein 1;2 (NIP1;2); FUNCTIONS IN: water channel activity, arsenite transmembrane transporter activity; INVOLVED IN: transport, hydrogen peroxide transmembrane transport, response to arsenic, arsenite transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like major intrinsic protein 1 (TAIR:AT4G19030.1); Has 10753 Blast hits to 10647 proteins in 2223 species: Archae - 110; Bacteria - 5339; Metazoa - 1367; Fungi - 450; Plants - 2101; Viruses - 4; Other Eukaryotes - 1382 (source: NCBI BLink). & (gnl|cdd|35444 : 194.0) no description available & (gnl|cdd|29423 : 161.0) no description available & (reliability: 438.0) & (original description: Putative mip4, Description = 1, PFAM = PF00230)' T '34.19.99' 'transport.Major Intrinsic Proteins.unspecified' 'niben101scf00579_28559-33539' '(at5g37820 : 338.0) NOD26-like intrinsic protein 4;2 (NIP4;2); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 4;1 (TAIR:AT5G37810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p08995|no26_soybn : 263.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (gnl|cdd|35444 : 201.0) no description available & (gnl|cdd|29423 : 164.0) no description available & (reliability: 676.0) & (original description: Putative mip4, Description = Major intrinsic protein (MIP) family transporter, PFAM = PF00230)' T '34.19.99' 'transport.Major Intrinsic Proteins.unspecified' 'niben101scf00579_37827-41171' '(at5g37820 : 127.0) NOD26-like intrinsic protein 4;2 (NIP4;2); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 4;1 (TAIR:AT5G37810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p08995|no26_soybn : 107.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (gnl|cdd|35444 : 89.1) no description available & (gnl|cdd|29423 : 85.2) no description available & (reliability: 254.0) & (original description: Putative rMIP1, Description = Major intrinsic protein (MIP) family transporter, PFAM = PF00230)' T '34.19.99' 'transport.Major Intrinsic Proteins.unspecified' 'niben101scf00613_122350-127486' '(at4g18910 : 318.0) Encodes an aquaporin homolog. Functions in arsenite transport and tolerance.When expressed in yeast cells can conduct hydrogen peroxide into those cells.; NOD26-like intrinsic protein 1;2 (NIP1;2); FUNCTIONS IN: water channel activity, arsenite transmembrane transporter activity; INVOLVED IN: transport, hydrogen peroxide transmembrane transport, response to arsenic, arsenite transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like major intrinsic protein 1 (TAIR:AT4G19030.1); Has 10753 Blast hits to 10647 proteins in 2223 species: Archae - 110; Bacteria - 5339; Metazoa - 1367; Fungi - 450; Plants - 2101; Viruses - 4; Other Eukaryotes - 1382 (source: NCBI BLink). & (p08995|no26_soybn : 317.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (gnl|cdd|35444 : 239.0) no description available & (gnl|cdd|84627 : 195.0) no description available & (reliability: 606.0) & (original description: Putative mip4, Description = Major intrinsic protein (MIP) family transporter, PFAM = PF00230)' T '34.19.99' 'transport.Major Intrinsic Proteins.unspecified' 'niben101scf02751_418607-422131' '(at4g19030 : 218.0) an aquaporin whose expression level is reduced by ABA, NaCl, dark, and dessication. is expressed at relatively low levels under normal conditions. Also functions in arsenite transport and tolerance.; NOD26-like major intrinsic protein 1 (NLM1); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 1;2 (TAIR:AT4G18910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p08995|no26_soybn : 218.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (gnl|cdd|35444 : 193.0) no description available & (gnl|cdd|84627 : 165.0) no description available & (reliability: 424.0) & (original description: Putative rMIP1, Description = Major intrinsic protein (MIP) family transporter, PFAM = PF00230)' T '34.19.99' 'transport.Major Intrinsic Proteins.unspecified' 'niben101scf04845_121359-129342' '(at5g37820 : 340.0) NOD26-like intrinsic protein 4;2 (NIP4;2); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 4;1 (TAIR:AT5G37810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p08995|no26_soybn : 290.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (gnl|cdd|35444 : 218.0) no description available & (gnl|cdd|84627 : 184.0) no description available & (reliability: 680.0) & (original description: Putative mip4, Description = Major intrinsic protein (MIP) family transporter, PFAM = PF00230)' T '34.19.99' 'transport.Major Intrinsic Proteins.unspecified' 'niben101scf06376_338016-378911' '(at5g37820 : 325.0) NOD26-like intrinsic protein 4;2 (NIP4;2); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 4;1 (TAIR:AT5G37810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p08995|no26_soybn : 269.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (gnl|cdd|35444 : 202.0) no description available & (gnl|cdd|84627 : 171.0) no description available & (reliability: 650.0) & (original description: Putative NIP1, Description = Noduline-like intrinsic protein 13, PFAM = PF00230)' T '34.20' 'transport.porins' 'niben044scf00001581ctg008_2989-7205' '(p42056|vdac2_soltu : 337.0) 36 kDa outer mitochondrial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) (POM 36) - Solanum tuberosum (Potato) & (at3g01280 : 257.0) Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol.; voltage dependent anion channel 1 (VDAC1); FUNCTIONS IN: voltage-gated anion channel activity; INVOLVED IN: response to bacterium, anion transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Porin, eukaryotic type (InterPro:IPR001925); BEST Arabidopsis thaliana protein match is: voltage dependent anion channel 3 (TAIR:AT5G15090.2); Has 888 Blast hits to 888 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 413; Fungi - 146; Plants - 300; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|85468 : 183.0) no description available & (gnl|cdd|38336 : 172.0) no description available & (reliability: 514.0) & (original description: Putative por, Description = Voltage-dependent anion channel, PFAM = PF01459;PF01459)' T '34.20' 'transport.porins' 'niben044scf00035409ctg002_111-6402' '(at5g67500 : 323.0) Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol.; voltage dependent anion channel 2 (VDAC2); CONTAINS InterPro DOMAIN/s: Porin, eukaryotic type (InterPro:IPR001925); BEST Arabidopsis thaliana protein match is: voltage dependent anion channel 5 (TAIR:AT3G49920.1). & (p42054|vdac_pea : 222.0) Outer plastidial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) - Pisum sativum (Garden pea) & (gnl|cdd|38336 : 215.0) no description available & (gnl|cdd|85468 : 153.0) no description available & (reliability: 646.0) & (original description: Putative VDAC2, Description = Mitochondrial outer membrane protein porin 2, PFAM = PF01459)' T '34.20' 'transport.porins' 'niben101scf00853_707334-717213' '(at5g67500 : 321.0) Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol.; voltage dependent anion channel 2 (VDAC2); CONTAINS InterPro DOMAIN/s: Porin, eukaryotic type (InterPro:IPR001925); BEST Arabidopsis thaliana protein match is: voltage dependent anion channel 5 (TAIR:AT3G49920.1). & (p42054|vdac_pea : 234.0) Outer plastidial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) - Pisum sativum (Garden pea) & (gnl|cdd|38336 : 215.0) no description available & (gnl|cdd|85468 : 163.0) no description available & (reliability: 642.0) & (original description: Putative VDAC2, Description = Mitochondrial outer membrane protein porin 2, PFAM = PF01459)' T '34.20' 'transport.porins' 'niben101scf02253_654712-660044' '(p42055|vdac1_soltu : 444.0) 34 kDa outer mitochondrial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) (POM 34) - Solanum tuberosum (Potato) & (at3g01280 : 376.0) Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol.; voltage dependent anion channel 1 (VDAC1); FUNCTIONS IN: voltage-gated anion channel activity; INVOLVED IN: response to bacterium, anion transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Porin, eukaryotic type (InterPro:IPR001925); BEST Arabidopsis thaliana protein match is: voltage dependent anion channel 3 (TAIR:AT5G15090.2); Has 888 Blast hits to 888 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 413; Fungi - 146; Plants - 300; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|85468 : 255.0) no description available & (gnl|cdd|38336 : 248.0) no description available & (reliability: 752.0) & (original description: Putative pom30, Description = Porin/voltage-dependent anion-selective channel protein, PFAM = PF01459)' T '34.20' 'transport.porins' 'niben101scf04407_204122-207369' '(p42056|vdac2_soltu : 168.0) 36 kDa outer mitochondrial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) (POM 36) - Solanum tuberosum (Potato) & (at3g01280 : 156.0) Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol.; voltage dependent anion channel 1 (VDAC1); FUNCTIONS IN: voltage-gated anion channel activity; INVOLVED IN: response to bacterium, anion transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Porin, eukaryotic type (InterPro:IPR001925); BEST Arabidopsis thaliana protein match is: voltage dependent anion channel 3 (TAIR:AT5G15090.2); Has 888 Blast hits to 888 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 413; Fungi - 146; Plants - 300; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|38336 : 110.0) no description available & (gnl|cdd|85468 : 101.0) no description available & (reliability: 312.0) & (original description: Putative PGSC0003DMG400025346, Description = Mitochondrial outer membrane protein porin of 36 kDa, PFAM = PF01459)' T '34.20' 'transport.porins' 'niben101scf04627_246115-252416' '(at5g67500 : 345.0) Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol.; voltage dependent anion channel 2 (VDAC2); CONTAINS InterPro DOMAIN/s: Porin, eukaryotic type (InterPro:IPR001925); BEST Arabidopsis thaliana protein match is: voltage dependent anion channel 5 (TAIR:AT3G49920.1). & (p42054|vdac_pea : 236.0) Outer plastidial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) - Pisum sativum (Garden pea) & (gnl|cdd|38336 : 215.0) no description available & (gnl|cdd|85468 : 153.0) no description available & (reliability: 690.0) & (original description: Putative VDAC2, Description = Mitochondrial outer membrane protein porin 2, PFAM = PF01459)' T '34.20' 'transport.porins' 'niben101scf06750_179961-191592' '(p42056|vdac2_soltu : 462.0) 36 kDa outer mitochondrial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) (POM 36) - Solanum tuberosum (Potato) & (at3g01280 : 359.0) Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol.; voltage dependent anion channel 1 (VDAC1); FUNCTIONS IN: voltage-gated anion channel activity; INVOLVED IN: response to bacterium, anion transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Porin, eukaryotic type (InterPro:IPR001925); BEST Arabidopsis thaliana protein match is: voltage dependent anion channel 3 (TAIR:AT5G15090.2); Has 888 Blast hits to 888 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 413; Fungi - 146; Plants - 300; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|85468 : 252.0) no description available & (gnl|cdd|38336 : 234.0) no description available & (reliability: 718.0) & (original description: Putative pom30, Description = Porin/voltage-dependent anion-selective channel protein, PFAM = PF01459)' T '34.20' 'transport.porins' 'niben101scf07522_26491-31165' '(p42055|vdac1_soltu : 479.0) 34 kDa outer mitochondrial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) (POM 34) - Solanum tuberosum (Potato) & (at3g01280 : 383.0) Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol.; voltage dependent anion channel 1 (VDAC1); FUNCTIONS IN: voltage-gated anion channel activity; INVOLVED IN: response to bacterium, anion transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Porin, eukaryotic type (InterPro:IPR001925); BEST Arabidopsis thaliana protein match is: voltage dependent anion channel 3 (TAIR:AT5G15090.2); Has 888 Blast hits to 888 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 413; Fungi - 146; Plants - 300; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|85468 : 266.0) no description available & (gnl|cdd|38336 : 245.0) no description available & (reliability: 766.0) & (original description: Putative pom30, Description = Porin/voltage-dependent anion-selective channel protein, PFAM = PF01459)' T '34.20' 'transport.porins' 'niben101scf19421_1-5712' '(p42056|vdac2_soltu : 449.0) 36 kDa outer mitochondrial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) (POM 36) - Solanum tuberosum (Potato) & (at3g01280 : 362.0) Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol.; voltage dependent anion channel 1 (VDAC1); FUNCTIONS IN: voltage-gated anion channel activity; INVOLVED IN: response to bacterium, anion transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Porin, eukaryotic type (InterPro:IPR001925); BEST Arabidopsis thaliana protein match is: voltage dependent anion channel 3 (TAIR:AT5G15090.2); Has 888 Blast hits to 888 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 413; Fungi - 146; Plants - 300; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|85468 : 250.0) no description available & (gnl|cdd|38336 : 230.0) no description available & (reliability: 724.0) & (original description: Putative pom30, Description = Porin/voltage-dependent anion-selective channel protein, PFAM = PF01459)' T '34.21' 'transport.calcium' 'nbv0.3scaffold22947_3955-20956' '(at1g10130 : 328.0) Encodes a golgi localized P2A-type Ca2+ ATPase involved in Mn nutrition and homeostasis.; endoplasmic reticulum-type calcium-transporting ATPase 3 (ECA3); FUNCTIONS IN: manganese-transporting ATPase activity, calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: manganese ion transport, calcium ion transport, root development, manganese ion homeostasis; LOCATED IN: endomembrane system, Golgi apparatus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: endomembrane-type CA-ATPase 4 (TAIR:AT1G07670.1); Has 52019 Blast hits to 33942 proteins in 3233 species: Archae - 1100; Bacteria - 36533; Metazoa - 4334; Fungi - 2931; Plants - 2474; Viruses - 3; Other Eukaryotes - 4644 (source: NCBI BLink). & (gnl|cdd|35423 : 269.0) no description available & (gnl|cdd|30822 : 163.0) no description available & (reliability: 656.0) & (original description: Putative serca, Description = Calcium-transporting ATPase, PFAM = PF00690;PF00122)' T '34.21' 'transport.calcium' 'nbv0.3scaffold27863_3884-12288' '(at3g51860 : 493.0) cation exchanger 3 (CAX3); CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837), Calcium/proton exchanger superfamily (InterPro:IPR004798), Calcium/proton exchanger (InterPro:IPR004713); BEST Arabidopsis thaliana protein match is: cation exchanger 1 (TAIR:AT2G38170.1); Has 3567 Blast hits to 3405 proteins in 1022 species: Archae - 24; Bacteria - 2167; Metazoa - 14; Fungi - 725; Plants - 252; Viruses - 0; Other Eukaryotes - 385 (source: NCBI BLink). & (gnl|cdd|36611 : 490.0) no description available & (q769e5|cax1a_orysa : 446.0) Vacuolar cation/proton exchanger 1a (Ca(2+)/H(+) exchanger 1a) (OsCAX1a) - Oryza sativa (Rice) & (gnl|cdd|30736 : 224.0) no description available & (reliability: 986.0) & (original description: Putative CAX3, Description = Vacuolar cation/proton exchanger 3, PFAM = PF01699;PF01699)' T '34.21' 'transport.calcium' 'nbv0.3scaffold30100_11972-15666' '(at5g17860 : 441.0) calcium exchanger 7 (CAX7); FUNCTIONS IN: cation:cation antiporter activity, calcium:sodium antiporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837); BEST Arabidopsis thaliana protein match is: cation calcium exchanger 4 (TAIR:AT1G54115.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37610 : 343.0) no description available & (reliability: 882.0) & (original description: Putative CCX1, Description = Cation/calcium exchanger 1, PFAM = PF01699;PF01699)' T '34.21' 'transport.calcium' 'nbv0.3scaffold30299_16907-22565' '(gnl|cdd|35425 : 564.0) no description available & (at3g21180 : 555.0) one of the type IIB calcium pump isoforms. encodes an autoinhibited Ca(2+)-ATPase that contains an N-terminal calmodulin binding autoinhibitory domain.; autoinhibited Ca(2+)-ATPase 9 (ACA9); FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: single fertilization, pollen development; LOCATED IN: plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type cation exchange, alpha subunit (InterPro:IPR006069), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: autoinhibited Ca2+ -ATPase, isoform 8 (TAIR:AT5G57110.2); Has 46757 Blast hits to 34166 proteins in 3170 species: Archae - 936; Bacteria - 32145; Metazoa - 4117; Fungi - 2726; Plants - 2106; Viruses - 3; Other Eukaryotes - 4724 (source: NCBI BLink). & (q2qmx9|aca1_orysa : 360.0) Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) - Oryza sativa (Rice) & (gnl|cdd|30822 : 253.0) no description available & (reliability: 1094.0) & (original description: Putative pca1, Description = Calcium-transporting ATPase, PFAM = PF00702;PF00689)' T '34.21' 'transport.calcium' 'nbv0.3scaffold37351_9098-14967' '(at3g54900 : 184.0) A.thaliana PICOT protein.It activates CAX1 gene Calcium transport activity.In other organisms, PICOT proteins appear to play a negative regulatory role in cellular stress responses.; CAX interacting protein 1 (CXIP1); FUNCTIONS IN: antiporter activity, glutathione disulfide oxidoreductase activity; INVOLVED IN: cation transport; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336), Glutaredoxin-related protein (InterPro:IPR004480); BEST Arabidopsis thaliana protein match is: thioredoxin family protein (TAIR:AT4G04950.1); Has 5270 Blast hits to 5080 proteins in 1299 species: Archae - 26; Bacteria - 2196; Metazoa - 419; Fungi - 285; Plants - 426; Viruses - 0; Other Eukaryotes - 1918 (source: NCBI BLink). & (gnl|cdd|48577 : 157.0) no description available & (gnl|cdd|36129 : 139.0) no description available & (reliability: 368.0) & (original description: Putative grlA, Description = Glutaredoxin, PFAM = PF00462)' T '34.21' 'transport.calcium' 'nbv0.5scaffold525_249433-254589' '(gnl|cdd|35425 : 499.0) no description available & (at3g63380 : 396.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: calcium ion transport, cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT3G22910.1); Has 46574 Blast hits to 34715 proteins in 3214 species: Archae - 909; Bacteria - 32032; Metazoa - 4086; Fungi - 2666; Plants - 2162; Viruses - 3; Other Eukaryotes - 4716 (source: NCBI BLink). & (gnl|cdd|30822 : 267.0) no description available & (q6atv4|aca2_orysa : 231.0) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (reliability: 718.0) & (original description: Putative , Description = , PFAM = PF00122;PF00689)' T '34.21' 'transport.calcium' 'nbv0.5scaffold597_31018-107578' '(at1g10130 : 1662.0) Encodes a golgi localized P2A-type Ca2+ ATPase involved in Mn nutrition and homeostasis.; endoplasmic reticulum-type calcium-transporting ATPase 3 (ECA3); FUNCTIONS IN: manganese-transporting ATPase activity, calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: manganese ion transport, calcium ion transport, root development, manganese ion homeostasis; LOCATED IN: endomembrane system, Golgi apparatus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: endomembrane-type CA-ATPase 4 (TAIR:AT1G07670.1); Has 52019 Blast hits to 33942 proteins in 3233 species: Archae - 1100; Bacteria - 36533; Metazoa - 4334; Fungi - 2931; Plants - 2474; Viruses - 3; Other Eukaryotes - 4644 (source: NCBI BLink). & (gnl|cdd|35423 : 1242.0) no description available & (gnl|cdd|30822 : 659.0) no description available & (q65x71|aca6_orysa : 295.0) Probable calcium-transporting ATPase 6, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 6) - Oryza sativa (Rice) & (reliability: 3324.0) & (original description: Putative ECA3, Description = Calcium-transporting ATPase 3, endoplasmic reticulum-type, PFAM = PF00702;PF13246;PF00689;PF00122;PF00690)' T '34.21' 'transport.calcium' 'nbv0.5scaffold4580_36435-55293' '(at5g57110 : 1454.0) Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane.; "autoinhibited Ca2+ -ATPase, isoform 8" (ACA8); FUNCTIONS IN: protein self-association, calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: autoinhibited Ca(2+)-ATPase 10 (TAIR:AT4G29900.1); Has 45517 Blast hits to 34552 proteins in 3221 species: Archae - 872; Bacteria - 31142; Metazoa - 4022; Fungi - 2709; Plants - 2112; Viruses - 3; Other Eukaryotes - 4657 (source: NCBI BLink). & (gnl|cdd|35425 : 1419.0) no description available & (q2qmx9|aca1_orysa : 858.0) Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) - Oryza sativa (Rice) & (gnl|cdd|30822 : 621.0) no description available & (reliability: 2908.0) & (original description: Putative ACA8, Description = Calcium-transporting ATPase 8, plasma membrane-type, PFAM = PF00689;PF00122;PF00702;PF12515;PF00690)' T '34.21' 'transport.calcium' 'niben044scf00000465ctg004_84-4568' '(at4g03560 : 174.0) Encodes a depolarization-activated Ca(2+) channel. Anti-sense experiments with this gene as well as Sucrose-H(+) symporters and complementation of yeast sucrose uptake mutant cch1 suggest that this protein mediates a voltage-activated Ca(2+ )influx. Mutants lack detectable SV channel activity suggesting TPC1 is essential component of the SV channel. Patch clamp analysis of loss of function mutation indicates TPC1 does not affect Ca2+ signaling in response to abiotic and biotic stress.; two-pore channel 1 (TPC1); FUNCTIONS IN: voltage-gated calcium channel activity, calcium channel activity; INVOLVED IN: regulation of jasmonic acid biosynthetic process, calcium ion transport, calcium-mediated signaling, seed germination, regulation of stomatal movement; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), Ion transport (InterPro:IPR005821), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5qm84|tpc1_orysa : 161.0) Probable voltage-dependent calcium channel protein TPC1 (Probable voltage-gated calcium channel) (Two-pore calcium channel protein) - Oryza sativa (Rice) & (reliability: 348.0) & (original description: Putative CCH1, Description = Two pore calcium channel protein 1, PFAM = PF00520)' T '34.21' 'transport.calcium' 'niben044scf00000970ctg002_69669-80261' '(at1g27770 : 1617.0) Encodes a chloroplast envelope Ca2+-ATPase with an N-terminal autoinhibitor.; autoinhibited Ca2+-ATPase 1 (ACA1); FUNCTIONS IN: calcium channel activity, calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: cation transport, calcium ion transport, ATP biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, chloroplast inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type cation exchange, alpha subunit (InterPro:IPR006069), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: calcium ATPase 2 (TAIR:AT4G37640.1); Has 48793 Blast hits to 33205 proteins in 3149 species: Archae - 856; Bacteria - 30326; Metazoa - 5666; Fungi - 3781; Plants - 2732; Viruses - 4; Other Eukaryotes - 5428 (source: NCBI BLink). & (q2qmx9|aca1_orysa : 1588.0) Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) - Oryza sativa (Rice) & (gnl|cdd|35425 : 1417.0) no description available & (gnl|cdd|30822 : 577.0) no description available & (reliability: 3234.0) & (original description: Putative ACA1, Description = Calcium-transporting ATPase 1, chloroplastic, PFAM = PF13246;PF00702;PF12515;PF00122;PF00689;PF00690)' T '34.21' 'transport.calcium' 'niben044scf00005777ctg009_1-3426' '(at3g14070 : 561.0) Involved in cation (K, Na and Mn) homeostasis and transport; cation exchanger 9 (CAX9); CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837); BEST Arabidopsis thaliana protein match is: cation calcium exchanger 4 (TAIR:AT1G54115.1); Has 3863 Blast hits to 3216 proteins in 856 species: Archae - 67; Bacteria - 789; Metazoa - 1939; Fungi - 299; Plants - 225; Viruses - 0; Other Eukaryotes - 544 (source: NCBI BLink). & (gnl|cdd|37610 : 435.0) no description available & (reliability: 1122.0) & (original description: Putative CCX2, Description = Cation/calcium exchanger 2, PFAM = PF01699;PF01699)' T '34.21' 'transport.calcium' 'niben044scf00006049ctg019_1-7410' '(at3g55600 : 207.0) Membrane fusion protein Use1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Use1 (InterPro:IPR019150); BEST Arabidopsis thaliana protein match is: Membrane fusion protein Use1 (TAIR:AT1G54110.1); Has 235 Blast hits to 235 proteins in 85 species: Archae - 1; Bacteria - 13; Metazoa - 90; Fungi - 42; Plants - 82; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative USE1, Description = Qc-SNARE, USE1-family, PFAM = PF09753)' T '34.21' 'transport.calcium' 'niben044scf00014185ctg012_1-7369' '(q5kqn0|cax2_orysa : 555.0) Vacuolar cation/proton exchanger 2 (Ca(2+)/H(+) exchanger 2) (OsCAX2) - Oryza sativa (Rice) & (at1g55730 : 540.0) member of Low affinity calcium antiporter CAX2 family; cation exchanger 5 (CAX5); FUNCTIONS IN: cation:cation antiporter activity, calcium:cation antiporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837), Calcium/proton exchanger superfamily (InterPro:IPR004798), Calcium/proton exchanger (InterPro:IPR004713); BEST Arabidopsis thaliana protein match is: cation exchanger 2 (TAIR:AT3G13320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36611 : 461.0) no description available & (gnl|cdd|30736 : 242.0) no description available & (reliability: 1080.0) & (original description: Putative CAX2, Description = Vacuolar cation/proton exchanger 2, PFAM = PF01699;PF01699)' T '34.21' 'transport.calcium' 'niben044scf00019354ctg008_1450-18451' '(at1g10130 : 309.0) Encodes a golgi localized P2A-type Ca2+ ATPase involved in Mn nutrition and homeostasis.; endoplasmic reticulum-type calcium-transporting ATPase 3 (ECA3); FUNCTIONS IN: manganese-transporting ATPase activity, calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: manganese ion transport, calcium ion transport, root development, manganese ion homeostasis; LOCATED IN: endomembrane system, Golgi apparatus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: endomembrane-type CA-ATPase 4 (TAIR:AT1G07670.1); Has 52019 Blast hits to 33942 proteins in 3233 species: Archae - 1100; Bacteria - 36533; Metazoa - 4334; Fungi - 2931; Plants - 2474; Viruses - 3; Other Eukaryotes - 4644 (source: NCBI BLink). & (gnl|cdd|35423 : 258.0) no description available & (gnl|cdd|30822 : 150.0) no description available & (reliability: 618.0) & (original description: Putative serca, Description = Calcium-transporting ATPase, PFAM = PF00122;PF00690)' T '34.21' 'transport.calcium' 'niben044scf00023195ctg004_108-6309' '(gnl|cdd|36611 : 378.0) no description available & (at3g51860 : 358.0) cation exchanger 3 (CAX3); CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837), Calcium/proton exchanger superfamily (InterPro:IPR004798), Calcium/proton exchanger (InterPro:IPR004713); BEST Arabidopsis thaliana protein match is: cation exchanger 1 (TAIR:AT2G38170.1); Has 3567 Blast hits to 3405 proteins in 1022 species: Archae - 24; Bacteria - 2167; Metazoa - 14; Fungi - 725; Plants - 252; Viruses - 0; Other Eukaryotes - 385 (source: NCBI BLink). & (q769e5|cax1a_orysa : 314.0) Vacuolar cation/proton exchanger 1a (Ca(2+)/H(+) exchanger 1a) (OsCAX1a) - Oryza sativa (Rice) & (gnl|cdd|30736 : 191.0) no description available & (reliability: 716.0) & (original description: Putative cax, Description = Vacuolar cation/proton exchanger 3, PFAM = PF01699;PF01699)' T '34.21' 'transport.calcium' 'niben044scf00026063ctg001_14675-17219' '(at5g57110 : 82.0) Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane.; "autoinhibited Ca2+ -ATPase, isoform 8" (ACA8); FUNCTIONS IN: protein self-association, calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: autoinhibited Ca(2+)-ATPase 10 (TAIR:AT4G29900.1); Has 45517 Blast hits to 34552 proteins in 3221 species: Archae - 872; Bacteria - 31142; Metazoa - 4022; Fungi - 2709; Plants - 2112; Viruses - 3; Other Eukaryotes - 4657 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative pca1, Description = Calcium-transporting ATPase, PFAM = PF00122)' T '34.21' 'transport.calcium' 'niben044scf00031837ctg004_24902-27758' '(gnl|cdd|35425 : 134.0) no description available & (at5g57110 : 105.0) Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane.; "autoinhibited Ca2+ -ATPase, isoform 8" (ACA8); FUNCTIONS IN: protein self-association, calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: autoinhibited Ca(2+)-ATPase 10 (TAIR:AT4G29900.1); Has 45517 Blast hits to 34552 proteins in 3221 species: Archae - 872; Bacteria - 31142; Metazoa - 4022; Fungi - 2709; Plants - 2112; Viruses - 3; Other Eukaryotes - 4657 (source: NCBI BLink). & (q6atv4|aca2_orysa : 90.1) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (reliability: 210.0) & (original description: Putative pca1, Description = Calcium-transporting ATPase, PFAM = )' T '34.21' 'transport.calcium' 'niben044scf00038068ctg011_109-6761' '(at1g55730 : 535.0) member of Low affinity calcium antiporter CAX2 family; cation exchanger 5 (CAX5); FUNCTIONS IN: cation:cation antiporter activity, calcium:cation antiporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837), Calcium/proton exchanger superfamily (InterPro:IPR004798), Calcium/proton exchanger (InterPro:IPR004713); BEST Arabidopsis thaliana protein match is: cation exchanger 2 (TAIR:AT3G13320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6k1c4|cax3_orysa : 494.0) Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) exchanger 3) (OsCAX3) - Oryza sativa (Rice) & (gnl|cdd|36611 : 453.0) no description available & (gnl|cdd|30736 : 234.0) no description available & (reliability: 1070.0) & (original description: Putative CAX5, Description = Vacuolar cation/proton exchanger 5, PFAM = PF01699;PF01699)' T '34.21' 'transport.calcium' 'niben044scf00049354ctg004_2445-5416' '(at2g28910 : 182.0) Encodes a CAX-interacting protein (CXIP4). The gene product is located in the nucleus of GFP-CXIP4-expressing yeast cells. When transiently expressed in the tobacco leaves, GFP-CXIP4 locates to the nucleus as well as in discrete areas of the cytoplasm (which do not overlap with mitochondria).; CAX interacting protein 4 (CXIP4); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: positive regulation of calcium ion transport, response to zinc ion; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878); Has 71192 Blast hits to 36424 proteins in 1643 species: Archae - 52; Bacteria - 6434; Metazoa - 32894; Fungi - 8707; Plants - 4806; Viruses - 452; Other Eukaryotes - 17847 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative CXIP4, Description = CAX-interacting protein 4, PFAM = PF13917)' T '34.21' 'transport.calcium' 'niben101scf00271_790697-794637' '(at1g54115 : 743.0) Involved in cation (Na and K) homeostasis.; cation calcium exchanger 4 (CCX4); FUNCTIONS IN: cation:cation antiporter activity; INVOLVED IN: cation transport, cellular cation homeostasis; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837); BEST Arabidopsis thaliana protein match is: cation exchanger 9 (TAIR:AT3G14070.1); Has 4016 Blast hits to 3229 proteins in 801 species: Archae - 54; Bacteria - 848; Metazoa - 1841; Fungi - 309; Plants - 226; Viruses - 0; Other Eukaryotes - 738 (source: NCBI BLink). & (gnl|cdd|37610 : 458.0) no description available & (reliability: 1424.0) & (original description: Putative CCX4, Description = Cation/calcium exchanger 4, PFAM = PF01699;PF01699)' T '34.21' 'transport.calcium' 'niben101scf00370_351518-357454' '(at1g08960 : 511.0) member of Potassium-dependent sodium-calcium exchanger like-family; cation exchanger 11 (CAX11); FUNCTIONS IN: cation:cation antiporter activity, calcium:sodium antiporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837); BEST Arabidopsis thaliana protein match is: calcium exchanger 7 (TAIR:AT5G17860.1); Has 4219 Blast hits to 2943 proteins in 815 species: Archae - 83; Bacteria - 1788; Metazoa - 1182; Fungi - 291; Plants - 224; Viruses - 0; Other Eukaryotes - 651 (source: NCBI BLink). & (gnl|cdd|37610 : 331.0) no description available & (reliability: 1022.0) & (original description: Putative CCX5, Description = Cation/calcium exchanger 5, PFAM = PF01699;PF01699)' T '34.21' 'transport.calcium' 'niben101scf00613_553145-559667' '(at2g38270 : 367.0) Encodes protein homologous to CXIP1. CXIP1 is a PICOT domain containing protein interacts with CAX1, a high capacity calcium transporter. However, CXP2 does not interact with CAX1 and only moderately activates another calcium transporter CAX4.; CAX-interacting protein 2 (CXIP2); FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cation transport; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336), Glutaredoxin-related protein (InterPro:IPR004480); BEST Arabidopsis thaliana protein match is: CAX interacting protein 1 (TAIR:AT3G54900.1); Has 5833 Blast hits to 5648 proteins in 1292 species: Archae - 30; Bacteria - 2544; Metazoa - 528; Fungi - 278; Plants - 476; Viruses - 0; Other Eukaryotes - 1977 (source: NCBI BLink). & (gnl|cdd|36129 : 153.0) no description available & (gnl|cdd|48577 : 145.0) no description available & (reliability: 734.0) & (original description: Putative GRXS16, Description = Bifunctional monothiol glutaredoxin-S16, chloroplastic, PFAM = PF00462)' T '34.21' 'transport.calcium' 'niben101scf00991_592852-599389' '(at4g37640 : 1662.0) Encodes a calmodulin-regulated Ca(2+)-pump located in the endoplasmic reticulum. Belongs to plant 2B ATPase's with an N-terminal autoinhibitor.; calcium ATPase 2 (ACA2); FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding, calcium ion transmembrane transporter activity; INVOLVED IN: transport; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: Cation transporter/ E1-E2 ATPase family protein (TAIR:AT2G22950.1); Has 47430 Blast hits to 34684 proteins in 3201 species: Archae - 904; Bacteria - 32793; Metazoa - 4036; Fungi - 2849; Plants - 2078; Viruses - 3; Other Eukaryotes - 4767 (source: NCBI BLink). & (q2qmx9|aca1_orysa : 1583.0) Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) - Oryza sativa (Rice) & (gnl|cdd|35425 : 1412.0) no description available & (gnl|cdd|30822 : 574.0) no description available & (reliability: 3174.0) & (original description: Putative ACA2, Description = Calcium-transporting ATPase 2, plasma membrane-type, PFAM = PF00690;PF00122;PF00689;PF12515;PF13246)' T '34.21' 'transport.calcium' 'niben101scf01023_791784-843929' '(at4g03560 : 859.0) Encodes a depolarization-activated Ca(2+) channel. Anti-sense experiments with this gene as well as Sucrose-H(+) symporters and complementation of yeast sucrose uptake mutant cch1 suggest that this protein mediates a voltage-activated Ca(2+ )influx. Mutants lack detectable SV channel activity suggesting TPC1 is essential component of the SV channel. Patch clamp analysis of loss of function mutation indicates TPC1 does not affect Ca2+ signaling in response to abiotic and biotic stress.; two-pore channel 1 (TPC1); FUNCTIONS IN: voltage-gated calcium channel activity, calcium channel activity; INVOLVED IN: regulation of jasmonic acid biosynthetic process, calcium ion transport, calcium-mediated signaling, seed germination, regulation of stomatal movement; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), Ion transport (InterPro:IPR005821), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5qm84|tpc1_orysa : 778.0) Probable voltage-dependent calcium channel protein TPC1 (Probable voltage-gated calcium channel) (Two-pore calcium channel protein) - Oryza sativa (Rice) & (gnl|cdd|37512 : 283.0) no description available & (reliability: 1718.0) & (original description: Putative TPC1A, Description = Two pore calcium channel protein 1A, PFAM = PF00520;PF00520)' T '34.21' 'transport.calcium' 'niben101scf01060_106524-110464' '(at1g54115 : 720.0) Involved in cation (Na and K) homeostasis.; cation calcium exchanger 4 (CCX4); FUNCTIONS IN: cation:cation antiporter activity; INVOLVED IN: cation transport, cellular cation homeostasis; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837); BEST Arabidopsis thaliana protein match is: cation exchanger 9 (TAIR:AT3G14070.1); Has 4016 Blast hits to 3229 proteins in 801 species: Archae - 54; Bacteria - 848; Metazoa - 1841; Fungi - 309; Plants - 226; Viruses - 0; Other Eukaryotes - 738 (source: NCBI BLink). & (gnl|cdd|37610 : 444.0) no description available & (reliability: 1378.0) & (original description: Putative CCX4, Description = Cation/calcium exchanger 4, PFAM = PF01699;PF01699)' T '34.21' 'transport.calcium' 'niben101scf01329_3917-11352' '(at3g51860 : 502.0) cation exchanger 3 (CAX3); CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837), Calcium/proton exchanger superfamily (InterPro:IPR004798), Calcium/proton exchanger (InterPro:IPR004713); BEST Arabidopsis thaliana protein match is: cation exchanger 1 (TAIR:AT2G38170.1); Has 3567 Blast hits to 3405 proteins in 1022 species: Archae - 24; Bacteria - 2167; Metazoa - 14; Fungi - 725; Plants - 252; Viruses - 0; Other Eukaryotes - 385 (source: NCBI BLink). & (gnl|cdd|36611 : 494.0) no description available & (q769e5|cax1a_orysa : 455.0) Vacuolar cation/proton exchanger 1a (Ca(2+)/H(+) exchanger 1a) (OsCAX1a) - Oryza sativa (Rice) & (gnl|cdd|30736 : 224.0) no description available & (reliability: 1004.0) & (original description: Putative CAX1, Description = Vacuolar cation/proton exchanger 1, PFAM = PF01699;PF01699)' T '34.21' 'transport.calcium' 'niben101scf01329_110375-120629' '(at3g51870 : 495.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, response to nematode; LOCATED IN: mitochondrial inner membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: thylakoid ATP/ADP carrier (TAIR:AT5G01500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35971 : 306.0) no description available & (p29518|bt1_maize : 126.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 92.3) no description available & (reliability: 990.0) & (original description: Putative EAAC, Description = Probable envelope ADP,ATP carrier protein, chloroplastic, PFAM = PF00153;PF00153;PF00153)' T '34.21' 'transport.calcium' 'niben101scf02282_63842-70763' '(at4g37640 : 1683.0) Encodes a calmodulin-regulated Ca(2+)-pump located in the endoplasmic reticulum. Belongs to plant 2B ATPase's with an N-terminal autoinhibitor.; calcium ATPase 2 (ACA2); FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding, calcium ion transmembrane transporter activity; INVOLVED IN: transport; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: Cation transporter/ E1-E2 ATPase family protein (TAIR:AT2G22950.1); Has 47430 Blast hits to 34684 proteins in 3201 species: Archae - 904; Bacteria - 32793; Metazoa - 4036; Fungi - 2849; Plants - 2078; Viruses - 3; Other Eukaryotes - 4767 (source: NCBI BLink). & (q2qmx9|aca1_orysa : 1583.0) Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) - Oryza sativa (Rice) & (gnl|cdd|35425 : 1415.0) no description available & (gnl|cdd|30822 : 579.0) no description available & (reliability: 3156.0) & (original description: Putative ACA2, Description = Calcium-transporting ATPase 2, plasma membrane-type, PFAM = PF13246;PF00122;PF12515;PF00690;PF00689)' T '34.21' 'transport.calcium' 'niben101scf02441_315501-328804' '(at1g07670 : 1734.0) endomembrane-type CA-ATPase 4 (ECA4); FUNCTIONS IN: calcium-transporting ATPase activity; INVOLVED IN: cation transport, calcium ion transport, metabolic process, ATP biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: guard cell, callus, cultured cell; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ER-type Ca2+-ATPase 1 (TAIR:AT1G07810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35423 : 1267.0) no description available & (gnl|cdd|30822 : 695.0) no description available & (q65x71|aca6_orysa : 350.0) Probable calcium-transporting ATPase 6, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 6) - Oryza sativa (Rice) & (reliability: 3468.0) & (original description: Putative ECA1, Description = Calcium-transporting ATPase 1, endoplasmic reticulum-type, PFAM = PF00122;PF00690;PF00689;PF00702)' T '34.21' 'transport.calcium' 'niben101scf02763_84264-88186' '(at3g14070 : 568.0) Involved in cation (K, Na and Mn) homeostasis and transport; cation exchanger 9 (CAX9); CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837); BEST Arabidopsis thaliana protein match is: cation calcium exchanger 4 (TAIR:AT1G54115.1); Has 3863 Blast hits to 3216 proteins in 856 species: Archae - 67; Bacteria - 789; Metazoa - 1939; Fungi - 299; Plants - 225; Viruses - 0; Other Eukaryotes - 544 (source: NCBI BLink). & (gnl|cdd|37610 : 432.0) no description available & (reliability: 1136.0) & (original description: Putative CCX4, Description = Cation/calcium exchanger 4, PFAM = PF01699;PF01699)' T '34.21' 'transport.calcium' 'niben101scf02976_113323-120771' '(at3g55600 : 219.0) Membrane fusion protein Use1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Use1 (InterPro:IPR019150); BEST Arabidopsis thaliana protein match is: Membrane fusion protein Use1 (TAIR:AT1G54110.1); Has 235 Blast hits to 235 proteins in 85 species: Archae - 1; Bacteria - 13; Metazoa - 90; Fungi - 42; Plants - 82; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative USE1, Description = Qc-SNARE, USE1-family, PFAM = PF09753)' T '34.21' 'transport.calcium' 'niben101scf03531_44877-49171' '(at5g57110 : 209.0) Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane.; "autoinhibited Ca2+ -ATPase, isoform 8" (ACA8); FUNCTIONS IN: protein self-association, calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: autoinhibited Ca(2+)-ATPase 10 (TAIR:AT4G29900.1); Has 45517 Blast hits to 34552 proteins in 3221 species: Archae - 872; Bacteria - 31142; Metazoa - 4022; Fungi - 2709; Plants - 2112; Viruses - 3; Other Eukaryotes - 4657 (source: NCBI BLink). & (gnl|cdd|35425 : 205.0) no description available & (q2ras0|aca5_orysa : 151.0) Probable calcium-transporting ATPase 5, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 5) - Oryza sativa (Rice) & (gnl|cdd|30822 : 119.0) no description available & (reliability: 418.0) & (original description: Putative PGSC0003DMG400010018, Description = , PFAM = PF00689;PF00122)' T '34.21' 'transport.calcium' 'niben101scf04808_33654-53899' '(at5g57110 : 1457.0) Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane.; "autoinhibited Ca2+ -ATPase, isoform 8" (ACA8); FUNCTIONS IN: protein self-association, calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: autoinhibited Ca(2+)-ATPase 10 (TAIR:AT4G29900.1); Has 45517 Blast hits to 34552 proteins in 3221 species: Archae - 872; Bacteria - 31142; Metazoa - 4022; Fungi - 2709; Plants - 2112; Viruses - 3; Other Eukaryotes - 4657 (source: NCBI BLink). & (gnl|cdd|35425 : 1423.0) no description available & (q2qmx9|aca1_orysa : 860.0) Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) - Oryza sativa (Rice) & (gnl|cdd|30822 : 621.0) no description available & (reliability: 2914.0) & (original description: Putative ACA8, Description = Calcium-transporting ATPase 8, plasma membrane-type, PFAM = PF00689;PF00122;PF00690;PF00702;PF12515)' T '34.21' 'transport.calcium' 'niben101scf05860_25313-30484' '(gnl|cdd|35425 : 503.0) no description available & (at3g63380 : 398.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: calcium ion transport, cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT3G22910.1); Has 46574 Blast hits to 34715 proteins in 3214 species: Archae - 909; Bacteria - 32032; Metazoa - 4086; Fungi - 2666; Plants - 2162; Viruses - 3; Other Eukaryotes - 4716 (source: NCBI BLink). & (gnl|cdd|30822 : 266.0) no description available & (q6atv4|aca2_orysa : 232.0) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (reliability: 718.0) & (original description: Putative , Description = , PFAM = PF00122;PF00689)' T '34.21' 'transport.calcium' 'niben101scf05881_116162-151092' '(gnl|cdd|36611 : 460.0) no description available & (at3g51860 : 441.0) cation exchanger 3 (CAX3); CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837), Calcium/proton exchanger superfamily (InterPro:IPR004798), Calcium/proton exchanger (InterPro:IPR004713); BEST Arabidopsis thaliana protein match is: cation exchanger 1 (TAIR:AT2G38170.1); Has 3567 Blast hits to 3405 proteins in 1022 species: Archae - 24; Bacteria - 2167; Metazoa - 14; Fungi - 725; Plants - 252; Viruses - 0; Other Eukaryotes - 385 (source: NCBI BLink). & (q769e5|cax1a_orysa : 403.0) Vacuolar cation/proton exchanger 1a (Ca(2+)/H(+) exchanger 1a) (OsCAX1a) - Oryza sativa (Rice) & (gnl|cdd|30736 : 228.0) no description available & (reliability: 882.0) & (original description: Putative cax, Description = CAX, PFAM = PF01699;PF01699)' T '34.21' 'transport.calcium' 'niben101scf06238_285918-295695' '(at1g07670 : 1735.0) endomembrane-type CA-ATPase 4 (ECA4); FUNCTIONS IN: calcium-transporting ATPase activity; INVOLVED IN: cation transport, calcium ion transport, metabolic process, ATP biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: guard cell, callus, cultured cell; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ER-type Ca2+-ATPase 1 (TAIR:AT1G07810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35423 : 1259.0) no description available & (gnl|cdd|30822 : 692.0) no description available & (q2ras0|aca5_orysa : 355.0) Probable calcium-transporting ATPase 5, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 5) - Oryza sativa (Rice) & (reliability: 3470.0) & (original description: Putative ECA1, Description = Calcium-transporting ATPase 1, endoplasmic reticulum-type, PFAM = PF00689;PF00122;PF00702;PF00690)' T '34.21' 'transport.calcium' 'niben101scf06275_471642-475375' '(at5g17860 : 361.0) calcium exchanger 7 (CAX7); FUNCTIONS IN: cation:cation antiporter activity, calcium:sodium antiporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837); BEST Arabidopsis thaliana protein match is: cation calcium exchanger 4 (TAIR:AT1G54115.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37610 : 338.0) no description available & (reliability: 722.0) & (original description: Putative cax7, Description = Cation/calcium exchanger 4, PFAM = PF01699;PF01699)' T '34.21' 'transport.calcium' 'niben101scf06467_462761-472519' '(at1g27770 : 1616.0) Encodes a chloroplast envelope Ca2+-ATPase with an N-terminal autoinhibitor.; autoinhibited Ca2+-ATPase 1 (ACA1); FUNCTIONS IN: calcium channel activity, calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: cation transport, calcium ion transport, ATP biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, chloroplast inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type cation exchange, alpha subunit (InterPro:IPR006069), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: calcium ATPase 2 (TAIR:AT4G37640.1); Has 48793 Blast hits to 33205 proteins in 3149 species: Archae - 856; Bacteria - 30326; Metazoa - 5666; Fungi - 3781; Plants - 2732; Viruses - 4; Other Eukaryotes - 5428 (source: NCBI BLink). & (q2qmx9|aca1_orysa : 1584.0) Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) - Oryza sativa (Rice) & (gnl|cdd|35425 : 1416.0) no description available & (gnl|cdd|30822 : 577.0) no description available & (reliability: 3232.0) & (original description: Putative ACA1, Description = Calcium-transporting ATPase 1, chloroplastic, PFAM = PF13246;PF00690;PF00689;PF12515;PF00122;PF00702)' T '34.21' 'transport.calcium' 'niben101scf06590_435830-439524' '(at5g17860 : 436.0) calcium exchanger 7 (CAX7); FUNCTIONS IN: cation:cation antiporter activity, calcium:sodium antiporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837); BEST Arabidopsis thaliana protein match is: cation calcium exchanger 4 (TAIR:AT1G54115.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37610 : 331.0) no description available & (reliability: 872.0) & (original description: Putative CCX1, Description = Cation/calcium exchanger 1, PFAM = PF01699;PF01699)' T '34.21' 'transport.calcium' 'niben101scf06590_436577-466148' '(at5g17860 : 307.0) calcium exchanger 7 (CAX7); FUNCTIONS IN: cation:cation antiporter activity, calcium:sodium antiporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837); BEST Arabidopsis thaliana protein match is: cation calcium exchanger 4 (TAIR:AT1G54115.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37610 : 224.0) no description available & (reliability: 614.0) & (original description: Putative cax7, Description = Cation/calcium exchanger 4, PFAM = PF01699)' T '34.21' 'transport.calcium' 'niben101scf07741_251419-270559' '(at3g21180 : 1483.0) one of the type IIB calcium pump isoforms. encodes an autoinhibited Ca(2+)-ATPase that contains an N-terminal calmodulin binding autoinhibitory domain.; autoinhibited Ca(2+)-ATPase 9 (ACA9); FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: single fertilization, pollen development; LOCATED IN: plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type cation exchange, alpha subunit (InterPro:IPR006069), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: autoinhibited Ca2+ -ATPase, isoform 8 (TAIR:AT5G57110.2); Has 46757 Blast hits to 34166 proteins in 3170 species: Archae - 936; Bacteria - 32145; Metazoa - 4117; Fungi - 2726; Plants - 2106; Viruses - 3; Other Eukaryotes - 4724 (source: NCBI BLink). & (gnl|cdd|35425 : 1368.0) no description available & (q2qmx9|aca1_orysa : 823.0) Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) - Oryza sativa (Rice) & (gnl|cdd|30822 : 588.0) no description available & (reliability: 2728.0) & (original description: Putative ACA9, Description = Calcium-transporting ATPase 9, plasma membrane-type, PFAM = PF12515;PF00122;PF00702;PF00690;PF00689)' T '34.21' 'transport.calcium' 'niben101scf07797_285760-374975' '(at1g10130 : 1644.0) Encodes a golgi localized P2A-type Ca2+ ATPase involved in Mn nutrition and homeostasis.; endoplasmic reticulum-type calcium-transporting ATPase 3 (ECA3); FUNCTIONS IN: manganese-transporting ATPase activity, calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: manganese ion transport, calcium ion transport, root development, manganese ion homeostasis; LOCATED IN: endomembrane system, Golgi apparatus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: endomembrane-type CA-ATPase 4 (TAIR:AT1G07670.1); Has 52019 Blast hits to 33942 proteins in 3233 species: Archae - 1100; Bacteria - 36533; Metazoa - 4334; Fungi - 2931; Plants - 2474; Viruses - 3; Other Eukaryotes - 4644 (source: NCBI BLink). & (gnl|cdd|35423 : 1231.0) no description available & (gnl|cdd|30822 : 647.0) no description available & (q65x71|aca6_orysa : 290.0) Probable calcium-transporting ATPase 6, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 6) - Oryza sativa (Rice) & (reliability: 3288.0) & (original description: Putative ECA3, Description = Calcium-transporting ATPase 3, endoplasmic reticulum-type, PFAM = PF00702;PF00689;PF00690;PF13246;PF00122)' T '34.21' 'transport.calcium' 'niben101scf07797_329934-349511' '(at1g10130 : 392.0) Encodes a golgi localized P2A-type Ca2+ ATPase involved in Mn nutrition and homeostasis.; endoplasmic reticulum-type calcium-transporting ATPase 3 (ECA3); FUNCTIONS IN: manganese-transporting ATPase activity, calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: manganese ion transport, calcium ion transport, root development, manganese ion homeostasis; LOCATED IN: endomembrane system, Golgi apparatus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: endomembrane-type CA-ATPase 4 (TAIR:AT1G07670.1); Has 52019 Blast hits to 33942 proteins in 3233 species: Archae - 1100; Bacteria - 36533; Metazoa - 4334; Fungi - 2931; Plants - 2474; Viruses - 3; Other Eukaryotes - 4644 (source: NCBI BLink). & (gnl|cdd|35423 : 244.0) no description available & (gnl|cdd|30822 : 110.0) no description available & (reliability: 784.0) & (original description: Putative 7291, Description = Calcium-transporting ATPase, PFAM = PF13246)' T '34.21' 'transport.calcium' 'niben101scf09112_363376-377814' '(gnl|cdd|83278 : 718.0) no description available & (gnl|cdd|35424 : 309.0) no description available & (q6atv4|aca2_orysa : 166.0) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (at5g57350 : 162.0) member of Plasma membrane H+-ATPase family; H(+)-ATPase 3 (HA3); FUNCTIONS IN: ATPase activity, hydrogen-exporting ATPase activity, phosphorylative mechanism; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 2 (TAIR:AT4G30190.1). & (reliability: 318.0) & (original description: Putative mgtA, Description = Magnesium-importing ATPase, PFAM = PF00122;PF00702;PF00690)' T '34.21' 'transport.calcium' 'niben101scf10436_75471-83847' '(q5kqn0|cax2_orysa : 560.0) Vacuolar cation/proton exchanger 2 (Ca(2+)/H(+) exchanger 2) (OsCAX2) - Oryza sativa (Rice) & (at1g55730 : 539.0) member of Low affinity calcium antiporter CAX2 family; cation exchanger 5 (CAX5); FUNCTIONS IN: cation:cation antiporter activity, calcium:cation antiporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837), Calcium/proton exchanger superfamily (InterPro:IPR004798), Calcium/proton exchanger (InterPro:IPR004713); BEST Arabidopsis thaliana protein match is: cation exchanger 2 (TAIR:AT3G13320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36611 : 470.0) no description available & (gnl|cdd|30736 : 245.0) no description available & (reliability: 1078.0) & (original description: Putative CAX2, Description = Vacuolar cation/proton exchanger 2, PFAM = PF01699;PF01699)' T '34.21' 'transport.calcium' 'niben101scf11649_189808-197183' '(at1g55730 : 543.0) member of Low affinity calcium antiporter CAX2 family; cation exchanger 5 (CAX5); FUNCTIONS IN: cation:cation antiporter activity, calcium:cation antiporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837), Calcium/proton exchanger superfamily (InterPro:IPR004798), Calcium/proton exchanger (InterPro:IPR004713); BEST Arabidopsis thaliana protein match is: cation exchanger 2 (TAIR:AT3G13320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6k1c4|cax3_orysa : 503.0) Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) exchanger 3) (OsCAX3) - Oryza sativa (Rice) & (gnl|cdd|36611 : 458.0) no description available & (gnl|cdd|30736 : 241.0) no description available & (reliability: 1086.0) & (original description: Putative CAX5, Description = Vacuolar cation/proton exchanger 5, PFAM = PF01699;PF01699)' T '34.21' 'transport.calcium' 'niben101scf13167_174826-180648' '(at3g54900 : 184.0) A.thaliana PICOT protein.It activates CAX1 gene Calcium transport activity.In other organisms, PICOT proteins appear to play a negative regulatory role in cellular stress responses.; CAX interacting protein 1 (CXIP1); FUNCTIONS IN: antiporter activity, glutathione disulfide oxidoreductase activity; INVOLVED IN: cation transport; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336), Glutaredoxin-related protein (InterPro:IPR004480); BEST Arabidopsis thaliana protein match is: thioredoxin family protein (TAIR:AT4G04950.1); Has 5270 Blast hits to 5080 proteins in 1299 species: Archae - 26; Bacteria - 2196; Metazoa - 419; Fungi - 285; Plants - 426; Viruses - 0; Other Eukaryotes - 1918 (source: NCBI BLink). & (gnl|cdd|48577 : 159.0) no description available & (gnl|cdd|36129 : 141.0) no description available & (reliability: 368.0) & (original description: Putative GRXS7, Description = Monothiol glutaredoxin-S7, chloroplastic, PFAM = PF00462)' T '34.21' 'transport.calcium' 'niben101scf14708_49301-60706' '(q5kqn0|cax2_orysa : 561.0) Vacuolar cation/proton exchanger 2 (Ca(2+)/H(+) exchanger 2) (OsCAX2) - Oryza sativa (Rice) & (at1g55730 : 536.0) member of Low affinity calcium antiporter CAX2 family; cation exchanger 5 (CAX5); FUNCTIONS IN: cation:cation antiporter activity, calcium:cation antiporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837), Calcium/proton exchanger superfamily (InterPro:IPR004798), Calcium/proton exchanger (InterPro:IPR004713); BEST Arabidopsis thaliana protein match is: cation exchanger 2 (TAIR:AT3G13320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36611 : 460.0) no description available & (gnl|cdd|30736 : 240.0) no description available & (reliability: 1072.0) & (original description: Putative cax, Description = Vacuolar cation/proton exchanger 3, PFAM = PF01699;PF01699)' T '34.21' 'transport.calcium' 'niben101scf14922_119850-126867' '(at4g00900 : 1645.0) Type IIA (SERCA-type) Ca2+ ATPase, catalyzes the efflux of calcium from the cytoplasm.; ER-type Ca2+-ATPase 2 (ECA2); FUNCTIONS IN: calcium-transporting ATPase activity; INVOLVED IN: calcium ion transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type cation exchange, alpha subunit (InterPro:IPR006069), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ER-type Ca2+-ATPase 1 (TAIR:AT1G07810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35423 : 1234.0) no description available & (gnl|cdd|30822 : 698.0) no description available & (q6atv4|aca2_orysa : 326.0) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (reliability: 3290.0) & (original description: Putative LCA1, Description = Calcium-transporting ATPase, endoplasmic reticulum-type, PFAM = PF13246;PF00702;PF00690;PF00122;PF00689)' T '34.21' 'transport.calcium' 'niben101scf20935_55356-65322' '(at1g55730 : 506.0) member of Low affinity calcium antiporter CAX2 family; cation exchanger 5 (CAX5); FUNCTIONS IN: cation:cation antiporter activity, calcium:cation antiporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837), Calcium/proton exchanger superfamily (InterPro:IPR004798), Calcium/proton exchanger (InterPro:IPR004713); BEST Arabidopsis thaliana protein match is: cation exchanger 2 (TAIR:AT3G13320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6k1c4|cax3_orysa : 472.0) Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) exchanger 3) (OsCAX3) - Oryza sativa (Rice) & (gnl|cdd|36611 : 441.0) no description available & (gnl|cdd|30736 : 233.0) no description available & (reliability: 1012.0) & (original description: Putative CAX4, Description = Cation exchanger CAX4, PFAM = PF01699;PF01699)' T '34.21' 'transport.calcium' 'niben101scf20935_55359-65303' '(at1g55730 : 509.0) member of Low affinity calcium antiporter CAX2 family; cation exchanger 5 (CAX5); FUNCTIONS IN: cation:cation antiporter activity, calcium:cation antiporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837), Calcium/proton exchanger superfamily (InterPro:IPR004798), Calcium/proton exchanger (InterPro:IPR004713); BEST Arabidopsis thaliana protein match is: cation exchanger 2 (TAIR:AT3G13320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6k1c4|cax3_orysa : 477.0) Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) exchanger 3) (OsCAX3) - Oryza sativa (Rice) & (gnl|cdd|36611 : 447.0) no description available & (gnl|cdd|30736 : 238.0) no description available & (reliability: 1018.0) & (original description: Putative CAX4, Description = H+/Ca2+ exchanger, PFAM = PF01699;PF01699)' T '34.21' 'transport.calcium' 'niben101scf23495_14892-18625' '(at5g17860 : 418.0) calcium exchanger 7 (CAX7); FUNCTIONS IN: cation:cation antiporter activity, calcium:sodium antiporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837); BEST Arabidopsis thaliana protein match is: cation calcium exchanger 4 (TAIR:AT1G54115.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37610 : 334.0) no description available & (reliability: 836.0) & (original description: Putative cax7, Description = Cation/calcium exchanger 4, PFAM = PF01699;PF01699)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'nbv0.3scaffold9843_34267-39753' '(at5g53130 : 777.0) member of Cyclic nucleotide gated channel family; cyclic nucleotide gated channel 1 (CNGC1); FUNCTIONS IN: inward rectifier potassium channel activity, cyclic nucleotide binding, intracellular cyclic nucleotide activated cation channel activity, calmodulin binding, cation channel activity; INVOLVED IN: potassium ion transport, calcium ion transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 13 (TAIR:AT4G01010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35719 : 642.0) no description available & (reliability: 1554.0) & (original description: Putative CBP7, Description = Cyclic nucleotide-gated calmodulin-binding ion channel, PFAM = PF00520)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'nbv0.3scaffold16990_11815-18837' '(at5g53130 : 1026.0) member of Cyclic nucleotide gated channel family; cyclic nucleotide gated channel 1 (CNGC1); FUNCTIONS IN: inward rectifier potassium channel activity, cyclic nucleotide binding, intracellular cyclic nucleotide activated cation channel activity, calmodulin binding, cation channel activity; INVOLVED IN: potassium ion transport, calcium ion transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 13 (TAIR:AT4G01010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35719 : 695.0) no description available & (reliability: 2052.0) & (original description: Putative CNGC1, Description = Cyclic nucleotide-gated ion channel 1, PFAM = PF00027;PF00520)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'nbv0.3scaffold19243_24654-31870' '(at1g19780 : 429.0) member of Cyclic nucleotide gated channel family; cyclic nucleotide gated channel 8 (CNGC8); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: cyclic nucleotide gated channel 7 (TAIR:AT1G15990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35719 : 360.0) no description available & (reliability: 858.0) & (original description: Putative CBP7, Description = Cyclic nucleotide-gated ion channel-like protein, PFAM = PF00520;PF00027)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'nbv0.3scaffold31563_5885-13647' '(at5g57940 : 1026.0) member of Cyclic nucleotide gated channel family; cyclic nucleotide gated channel 5 (CNGC5); FUNCTIONS IN: cyclic nucleotide binding, calmodulin binding, potassium channel activity; INVOLVED IN: ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 6 (TAIR:AT2G23980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35719 : 723.0) no description available & (reliability: 2052.0) & (original description: Putative CNGC5, Description = Probable cyclic nucleotide-gated ion channel 5, PFAM = PF00027;PF00520)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'nbv0.3scaffold40567_11232-17850' '(at3g17690 : 387.0) member of Cyclic nucleotide gated channel family; cyclic nucleotide gated channel 19 (CNGC19); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-binding transporter 1 (TAIR:AT3G17700.1); Has 2826 Blast hits to 2760 proteins in 210 species: Archae - 0; Bacteria - 14; Metazoa - 1491; Fungi - 0; Plants - 890; Viruses - 0; Other Eukaryotes - 431 (source: NCBI BLink). & (gnl|cdd|35719 : 147.0) no description available & (reliability: 774.0) & (original description: Putative CNGC, Description = Cyclic nucleotide-gated cation channel protein, PFAM = PF00520)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'nbv0.3scaffold74021_2692-8397' '(at4g30360 : 817.0) member of Cyclic nucleotide gated channel family; cyclic nucleotide-gated channel 17 (CNGC17); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: potassium ion transport, ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 14 (TAIR:AT2G24610.1); Has 3400 Blast hits to 3264 proteins in 232 species: Archae - 0; Bacteria - 47; Metazoa - 1584; Fungi - 2; Plants - 959; Viruses - 0; Other Eukaryotes - 808 (source: NCBI BLink). & (gnl|cdd|35719 : 541.0) no description available & (reliability: 1634.0) & (original description: Putative Os12g0163000, Description = Os12g0163000 protein, PFAM = PF00520;PF00027)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'nbv0.5scaffold1584_365325-422855' '(at3g17700 : 793.0) cyclic nucleotide-binding transporter 1, member of a family of cyclic nucleotide gated channels.; cyclic nucleotide-binding transporter 1 (CNBT1); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: response to nematode; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide gated channel 19 (TAIR:AT3G17690.1); Has 2782 Blast hits to 2720 proteins in 214 species: Archae - 0; Bacteria - 20; Metazoa - 1493; Fungi - 0; Plants - 916; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink). & (gnl|cdd|35719 : 445.0) no description available & (reliability: 1586.0) & (original description: Putative CNGC20, Description = Probable cyclic nucleotide-gated ion channel 20, chloroplastic, PFAM = PF00520)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'nbv0.5scaffold1584_401368-422639' '(at3g17700 : 199.0) cyclic nucleotide-binding transporter 1, member of a family of cyclic nucleotide gated channels.; cyclic nucleotide-binding transporter 1 (CNBT1); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: response to nematode; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide gated channel 19 (TAIR:AT3G17690.1); Has 2782 Blast hits to 2720 proteins in 214 species: Archae - 0; Bacteria - 20; Metazoa - 1493; Fungi - 0; Plants - 916; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative CNGC, Description = Cyclic nucleotide-gated cation channel protein, PFAM = )' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'nbv0.5scaffold3468_193149-202712' '(at5g54250 : 453.0) member of Cyclic nucleotide gated channel family, downstream component of the signaling pathways leading to HR resistance. mutant plants exhibit gene-for-gene disease resistance against avirulent Pseudomonas syringae despite the near-complete absence of the hypersensitive response (HR). Salicylic acid accumulation in dnd2 mutants is completely PAD4-independent.; cyclic nucleotide-gated cation channel 4 (CNGC4); FUNCTIONS IN: cation transmembrane transporter activity, cyclic nucleotide binding, calmodulin binding, cation channel activity; INVOLVED IN: plant-type hypersensitive response; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Cyclic nucleotide-regulated ion channel family protein (TAIR:AT5G15410.1). & (gnl|cdd|35719 : 219.0) no description available & (reliability: 906.0) & (original description: Putative 6, Description = Cyclic nucleotide-gated ion channel 2, PFAM = PF00520)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'niben044scf00017021ctg000_573-4223' '(at5g53130 : 457.0) member of Cyclic nucleotide gated channel family; cyclic nucleotide gated channel 1 (CNGC1); FUNCTIONS IN: inward rectifier potassium channel activity, cyclic nucleotide binding, intracellular cyclic nucleotide activated cation channel activity, calmodulin binding, cation channel activity; INVOLVED IN: potassium ion transport, calcium ion transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 13 (TAIR:AT4G01010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35719 : 247.0) no description available & (reliability: 914.0) & (original description: Putative Os06g0527300, Description = Cyclic nucleotide-gated calmodulin-binding ion channel-like, PFAM = PF00520)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'niben044scf00018754ctg003_3312-11325' '(at5g15410 : 1036.0) 'defense, no death' gene (DND1) encodes a mutated cyclic nucleotide-gated cation channel; Same as CNGC2 (article ID 229): Cyclic nucleotide gated channel, activated by cAMP, conducts K+ and other monovalent cations but excludes Na+, does not contain the GYG amino acid sequence found in other channels with this conductivity profile. Conducts Ca2+ into cells which is linked to the generation of NO and the NO signaling pathway involved in the innate immune response to pathogens.; DEFENSE NO DEATH 1 (DND1); CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated cation channel 4 (TAIR:AT5G54250.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35719 : 518.0) no description available & (reliability: 2072.0) & (original description: Putative CNGC2, Description = Cyclic nucleotide-gated ion channel 2, PFAM = PF00027;PF00520)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'niben044scf00021336ctg005_1-6153' '(at5g54250 : 453.0) member of Cyclic nucleotide gated channel family, downstream component of the signaling pathways leading to HR resistance. mutant plants exhibit gene-for-gene disease resistance against avirulent Pseudomonas syringae despite the near-complete absence of the hypersensitive response (HR). Salicylic acid accumulation in dnd2 mutants is completely PAD4-independent.; cyclic nucleotide-gated cation channel 4 (CNGC4); FUNCTIONS IN: cation transmembrane transporter activity, cyclic nucleotide binding, calmodulin binding, cation channel activity; INVOLVED IN: plant-type hypersensitive response; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Cyclic nucleotide-regulated ion channel family protein (TAIR:AT5G15410.1). & (gnl|cdd|35719 : 222.0) no description available & (reliability: 906.0) & (original description: Putative 6, Description = Cyclic nucleotide-gated ion channel 2, PFAM = PF00520)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'niben044scf00031877ctg007_1-2294' '(at5g54250 : 157.0) member of Cyclic nucleotide gated channel family, downstream component of the signaling pathways leading to HR resistance. mutant plants exhibit gene-for-gene disease resistance against avirulent Pseudomonas syringae despite the near-complete absence of the hypersensitive response (HR). Salicylic acid accumulation in dnd2 mutants is completely PAD4-independent.; cyclic nucleotide-gated cation channel 4 (CNGC4); FUNCTIONS IN: cation transmembrane transporter activity, cyclic nucleotide binding, calmodulin binding, cation channel activity; INVOLVED IN: plant-type hypersensitive response; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Cyclic nucleotide-regulated ion channel family protein (TAIR:AT5G15410.1). & (gnl|cdd|35719 : 105.0) no description available & (reliability: 314.0) & (original description: Putative HLM1, Description = Cyclic nucleotide-gated ion channel 4, PFAM = )' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'niben044scf00037334ctg000_373-5749' '(at2g28260 : 1080.0) member of Cyclic nucleotide gated channel family; cyclic nucleotide-gated channel 15 (CNGC15); FUNCTIONS IN: cyclic nucleotide binding, calmodulin binding, cation channel activity; INVOLVED IN: potassium ion transport, ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 14 (TAIR:AT2G24610.1); Has 3177 Blast hits to 3099 proteins in 290 species: Archae - 0; Bacteria - 161; Metazoa - 1483; Fungi - 19; Plants - 962; Viruses - 0; Other Eukaryotes - 552 (source: NCBI BLink). & (gnl|cdd|35719 : 676.0) no description available & (reliability: 2160.0) & (original description: Putative CNGC15, Description = Putative cyclic nucleotide-gated ion channel 15, PFAM = PF00520)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'niben101scf00087_293607-300015' '(at2g24610 : 1044.0) member of Cyclic nucleotide gated channel family; cyclic nucleotide-gated channel 14 (CNGC14); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: potassium ion transport, ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 17 (TAIR:AT4G30360.1); Has 3394 Blast hits to 3208 proteins in 282 species: Archae - 0; Bacteria - 121; Metazoa - 1626; Fungi - 28; Plants - 945; Viruses - 0; Other Eukaryotes - 674 (source: NCBI BLink). & (gnl|cdd|35719 : 683.0) no description available & (reliability: 2088.0) & (original description: Putative CNGC14, Description = Probable cyclic nucleotide-gated ion channel 14, PFAM = PF00520;PF00027)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'niben101scf00530_939356-952611' '(at5g53130 : 1013.0) member of Cyclic nucleotide gated channel family; cyclic nucleotide gated channel 1 (CNGC1); FUNCTIONS IN: inward rectifier potassium channel activity, cyclic nucleotide binding, intracellular cyclic nucleotide activated cation channel activity, calmodulin binding, cation channel activity; INVOLVED IN: potassium ion transport, calcium ion transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 13 (TAIR:AT4G01010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35719 : 692.0) no description available & (reliability: 2026.0) & (original description: Putative CNGC1, Description = Cyclic nucleotide-gated ion channel 1, PFAM = PF00520;PF00027)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'niben101scf01062_808377-820576' '(at5g57940 : 1028.0) member of Cyclic nucleotide gated channel family; cyclic nucleotide gated channel 5 (CNGC5); FUNCTIONS IN: cyclic nucleotide binding, calmodulin binding, potassium channel activity; INVOLVED IN: ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 6 (TAIR:AT2G23980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35719 : 727.0) no description available & (reliability: 2056.0) & (original description: Putative CNGC5, Description = Probable cyclic nucleotide-gated ion channel 5, PFAM = PF00027;PF00520)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'niben101scf01409_1366999-1384329' '(at4g30360 : 494.0) member of Cyclic nucleotide gated channel family; cyclic nucleotide-gated channel 17 (CNGC17); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: potassium ion transport, ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 14 (TAIR:AT2G24610.1); Has 3400 Blast hits to 3264 proteins in 232 species: Archae - 0; Bacteria - 47; Metazoa - 1584; Fungi - 2; Plants - 959; Viruses - 0; Other Eukaryotes - 808 (source: NCBI BLink). & (gnl|cdd|35719 : 309.0) no description available & (reliability: 988.0) & (original description: Putative Os12g0163100, Description = Os12g0163100 protein, PFAM = PF00520)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'niben101scf02108_12583-31343' '(at3g17700 : 908.0) cyclic nucleotide-binding transporter 1, member of a family of cyclic nucleotide gated channels.; cyclic nucleotide-binding transporter 1 (CNBT1); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: response to nematode; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide gated channel 19 (TAIR:AT3G17690.1); Has 2782 Blast hits to 2720 proteins in 214 species: Archae - 0; Bacteria - 20; Metazoa - 1493; Fungi - 0; Plants - 916; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink). & (gnl|cdd|35719 : 469.0) no description available & (reliability: 1816.0) & (original description: Putative CNGC20, Description = Probable cyclic nucleotide-gated ion channel 20, chloroplastic, PFAM = PF00520)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'niben101scf02108_25894-29653' '(at3g17700 : 228.0) cyclic nucleotide-binding transporter 1, member of a family of cyclic nucleotide gated channels.; cyclic nucleotide-binding transporter 1 (CNBT1); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: response to nematode; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide gated channel 19 (TAIR:AT3G17690.1); Has 2782 Blast hits to 2720 proteins in 214 species: Archae - 0; Bacteria - 20; Metazoa - 1493; Fungi - 0; Plants - 916; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink). & (gnl|cdd|35719 : 169.0) no description available & (reliability: 456.0) & (original description: Putative CBP7, Description = Cyclic nucleotide-gated cation channel protein, PFAM = )' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'niben101scf02562_18954-25437' '(at5g57940 : 1012.0) member of Cyclic nucleotide gated channel family; cyclic nucleotide gated channel 5 (CNGC5); FUNCTIONS IN: cyclic nucleotide binding, calmodulin binding, potassium channel activity; INVOLVED IN: ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 6 (TAIR:AT2G23980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35719 : 705.0) no description available & (reliability: 2024.0) & (original description: Putative CNGC5, Description = Probable cyclic nucleotide-gated ion channel 5, PFAM = PF00520;PF00027)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'niben101scf02603_241228-246323' '(at2g28260 : 1083.0) member of Cyclic nucleotide gated channel family; cyclic nucleotide-gated channel 15 (CNGC15); FUNCTIONS IN: cyclic nucleotide binding, calmodulin binding, cation channel activity; INVOLVED IN: potassium ion transport, ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 14 (TAIR:AT2G24610.1); Has 3177 Blast hits to 3099 proteins in 290 species: Archae - 0; Bacteria - 161; Metazoa - 1483; Fungi - 19; Plants - 962; Viruses - 0; Other Eukaryotes - 552 (source: NCBI BLink). & (gnl|cdd|35719 : 682.0) no description available & (reliability: 2166.0) & (original description: Putative CNGC15, Description = Putative cyclic nucleotide-gated ion channel 15, PFAM = PF00520)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'niben101scf02698_209630-230400' '(at3g17700 : 170.0) cyclic nucleotide-binding transporter 1, member of a family of cyclic nucleotide gated channels.; cyclic nucleotide-binding transporter 1 (CNBT1); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: response to nematode; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide gated channel 19 (TAIR:AT3G17690.1); Has 2782 Blast hits to 2720 proteins in 214 species: Archae - 0; Bacteria - 20; Metazoa - 1493; Fungi - 0; Plants - 916; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative CNGC, Description = Cyclic nucleotide-gated cation channel protein, PFAM = )' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'niben101scf03870_82849-90784' '(at5g14870 : 931.0) Encodes a member of the cyclic nucleotide gated channel family that is asymmetrically localized to the plasma membrane at the growing tip of the pollen tube and is involved in pollen tube growth. It likely directly transduces a cNMP signal into an ion flux that can produce a localized signal capable of regulating the pollen tip-growth machinery.; cyclic nucleotide-gated channel 18 (CNGC18); CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 16 (TAIR:AT3G48010.1); Has 3357 Blast hits to 3225 proteins in 243 species: Archae - 0; Bacteria - 71; Metazoa - 1532; Fungi - 0; Plants - 967; Viruses - 0; Other Eukaryotes - 787 (source: NCBI BLink). & (gnl|cdd|35719 : 649.0) no description available & (reliability: 1862.0) & (original description: Putative CNGC18, Description = Putative cyclic nucleotide-gated ion channel 18, PFAM = PF00027;PF00520)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'niben101scf04528_887588-896710' '(at5g54250 : 938.0) member of Cyclic nucleotide gated channel family, downstream component of the signaling pathways leading to HR resistance. mutant plants exhibit gene-for-gene disease resistance against avirulent Pseudomonas syringae despite the near-complete absence of the hypersensitive response (HR). Salicylic acid accumulation in dnd2 mutants is completely PAD4-independent.; cyclic nucleotide-gated cation channel 4 (CNGC4); FUNCTIONS IN: cation transmembrane transporter activity, cyclic nucleotide binding, calmodulin binding, cation channel activity; INVOLVED IN: plant-type hypersensitive response; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Cyclic nucleotide-regulated ion channel family protein (TAIR:AT5G15410.1). & (gnl|cdd|35719 : 524.0) no description available & (reliability: 1876.0) & (original description: Putative CNGC4, Description = Cyclic nucleotide-gated ion channel 4, PFAM = PF00520)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'niben101scf06091_543093-550131' '(at1g19780 : 878.0) member of Cyclic nucleotide gated channel family; cyclic nucleotide gated channel 8 (CNGC8); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: cyclic nucleotide gated channel 7 (TAIR:AT1G15990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35719 : 650.0) no description available & (reliability: 1756.0) & (original description: Putative CNGC8, Description = Putative cyclic nucleotide-gated ion channel 8, PFAM = PF00520;PF00027)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'niben101scf06976_710699-717915' '(at1g19780 : 881.0) member of Cyclic nucleotide gated channel family; cyclic nucleotide gated channel 8 (CNGC8); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: cyclic nucleotide gated channel 7 (TAIR:AT1G15990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35719 : 657.0) no description available & (reliability: 1762.0) & (original description: Putative CBP7, Description = Cyclic nucleotide-gated ion channel-like protein, PFAM = PF00520;PF00027)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'niben101scf08157_214991-227806' '(at5g54250 : 642.0) member of Cyclic nucleotide gated channel family, downstream component of the signaling pathways leading to HR resistance. mutant plants exhibit gene-for-gene disease resistance against avirulent Pseudomonas syringae despite the near-complete absence of the hypersensitive response (HR). Salicylic acid accumulation in dnd2 mutants is completely PAD4-independent.; cyclic nucleotide-gated cation channel 4 (CNGC4); FUNCTIONS IN: cation transmembrane transporter activity, cyclic nucleotide binding, calmodulin binding, cation channel activity; INVOLVED IN: plant-type hypersensitive response; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Cyclic nucleotide-regulated ion channel family protein (TAIR:AT5G15410.1). & (gnl|cdd|35719 : 361.0) no description available & (reliability: 1284.0) & (original description: Putative 2, Description = Cyclic nucleotide-gated ion channel 2, PFAM = PF00027)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'niben101scf08691_110917-116305' '(at2g28260 : 827.0) member of Cyclic nucleotide gated channel family; cyclic nucleotide-gated channel 15 (CNGC15); FUNCTIONS IN: cyclic nucleotide binding, calmodulin binding, cation channel activity; INVOLVED IN: potassium ion transport, ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 14 (TAIR:AT2G24610.1); Has 3177 Blast hits to 3099 proteins in 290 species: Archae - 0; Bacteria - 161; Metazoa - 1483; Fungi - 19; Plants - 962; Viruses - 0; Other Eukaryotes - 552 (source: NCBI BLink). & (gnl|cdd|35719 : 621.0) no description available & (reliability: 1654.0) & (original description: Putative CNGC15, Description = Putative cyclic nucleotide-gated ion channel 15, PFAM = PF00520)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'niben101scf08863_76490-92247' '(at5g15410 : 1034.0) 'defense, no death' gene (DND1) encodes a mutated cyclic nucleotide-gated cation channel; Same as CNGC2 (article ID 229): Cyclic nucleotide gated channel, activated by cAMP, conducts K+ and other monovalent cations but excludes Na+, does not contain the GYG amino acid sequence found in other channels with this conductivity profile. Conducts Ca2+ into cells which is linked to the generation of NO and the NO signaling pathway involved in the innate immune response to pathogens.; DEFENSE NO DEATH 1 (DND1); CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated cation channel 4 (TAIR:AT5G54250.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35719 : 521.0) no description available & (reliability: 2068.0) & (original description: Putative CNGC2, Description = Cyclic nucleotide-gated ion channel 2, PFAM = PF00520;PF00027)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'niben101scf11123_98085-116067' '(at4g30360 : 1010.0) member of Cyclic nucleotide gated channel family; cyclic nucleotide-gated channel 17 (CNGC17); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: potassium ion transport, ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 14 (TAIR:AT2G24610.1); Has 3400 Blast hits to 3264 proteins in 232 species: Archae - 0; Bacteria - 47; Metazoa - 1584; Fungi - 2; Plants - 959; Viruses - 0; Other Eukaryotes - 808 (source: NCBI BLink). & (gnl|cdd|35719 : 678.0) no description available & (reliability: 2020.0) & (original description: Putative CNGC17, Description = Probable cyclic nucleotide-gated ion channel 17, PFAM = PF00520;PF00027)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'niben101scf12714_107416-119742' '(at3g48010 : 839.0) member of Cyclic nucleotide gated channel family; cyclic nucleotide-gated channel 16 (CNGC16); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 18 (TAIR:AT5G14870.1); Has 3330 Blast hits to 3084 proteins in 251 species: Archae - 0; Bacteria - 33; Metazoa - 1612; Fungi - 37; Plants - 1021; Viruses - 0; Other Eukaryotes - 627 (source: NCBI BLink). & (gnl|cdd|35719 : 639.0) no description available & (reliability: 1678.0) & (original description: Putative CNGC16, Description = Probable cyclic nucleotide-gated ion channel 16, PFAM = PF00520;PF00027)' T '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'niben101scf13308_3617-11649' '(at5g53130 : 891.0) member of Cyclic nucleotide gated channel family; cyclic nucleotide gated channel 1 (CNGC1); FUNCTIONS IN: inward rectifier potassium channel activity, cyclic nucleotide binding, intracellular cyclic nucleotide activated cation channel activity, calmodulin binding, cation channel activity; INVOLVED IN: potassium ion transport, calcium ion transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 13 (TAIR:AT4G01010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35719 : 666.0) no description available & (reliability: 1782.0) & (original description: Putative CNGC1, Description = Cyclic nucleotide-gated ion channel 1, PFAM = PF00027;PF00520)' T '34.23' 'transport.hormones' '' '' '34.23.1' 'transport.hormones.auxin' 'nbv0.5scaffold862_438742-444685' '(at5g56750 : 497.0) N-MYC downregulated-like 1 (NDL1); CONTAINS InterPro DOMAIN/s: Pollen specific protein SF21 (InterPro:IPR015511), Ndr (InterPro:IPR004142); BEST Arabidopsis thaliana protein match is: N-MYC downregulated-like 3 (TAIR:AT2G19620.1); Has 776 Blast hits to 775 proteins in 111 species: Archae - 2; Bacteria - 48; Metazoa - 563; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (o23969|sf21_helan : 427.0) Pollen-specific protein SF21 - Helianthus annuus (Common sunflower) & (gnl|cdd|38142 : 380.0) no description available & (gnl|cdd|66750 : 353.0) no description available & (reliability: 976.0) & (original description: Putative NDL2, Description = AT5g11790/T22P22_180, PFAM = PF03096)' T '34.23.1' 'transport.hormones.auxin' 'niben044scf00008188ctg014_995-7513' '(at5g56750 : 498.0) N-MYC downregulated-like 1 (NDL1); CONTAINS InterPro DOMAIN/s: Pollen specific protein SF21 (InterPro:IPR015511), Ndr (InterPro:IPR004142); BEST Arabidopsis thaliana protein match is: N-MYC downregulated-like 3 (TAIR:AT2G19620.1); Has 776 Blast hits to 775 proteins in 111 species: Archae - 2; Bacteria - 48; Metazoa - 563; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (o23969|sf21_helan : 422.0) Pollen-specific protein SF21 - Helianthus annuus (Common sunflower) & (gnl|cdd|38142 : 393.0) no description available & (gnl|cdd|66750 : 353.0) no description available & (reliability: 986.0) & (original description: Putative NDL2, Description = AT5g11790/T22P22_180, PFAM = PF03096)' T '34.23.1' 'transport.hormones.auxin' 'niben044scf00027140ctg004_1-2595' '(at5g56750 : 404.0) N-MYC downregulated-like 1 (NDL1); CONTAINS InterPro DOMAIN/s: Pollen specific protein SF21 (InterPro:IPR015511), Ndr (InterPro:IPR004142); BEST Arabidopsis thaliana protein match is: N-MYC downregulated-like 3 (TAIR:AT2G19620.1); Has 776 Blast hits to 775 proteins in 111 species: Archae - 2; Bacteria - 48; Metazoa - 563; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (o23969|sf21_helan : 341.0) Pollen-specific protein SF21 - Helianthus annuus (Common sunflower) & (gnl|cdd|38142 : 265.0) no description available & (gnl|cdd|66750 : 242.0) no description available & (reliability: 734.0) & (original description: Putative SF, Description = Pollen-specific protein SF21, PFAM = PF03096)' T '34.23.1' 'transport.hormones.auxin' 'niben101scf01512_606724-615089' '(at5g56750 : 501.0) N-MYC downregulated-like 1 (NDL1); CONTAINS InterPro DOMAIN/s: Pollen specific protein SF21 (InterPro:IPR015511), Ndr (InterPro:IPR004142); BEST Arabidopsis thaliana protein match is: N-MYC downregulated-like 3 (TAIR:AT2G19620.1); Has 776 Blast hits to 775 proteins in 111 species: Archae - 2; Bacteria - 48; Metazoa - 563; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (o23969|sf21_helan : 429.0) Pollen-specific protein SF21 - Helianthus annuus (Common sunflower) & (gnl|cdd|38142 : 390.0) no description available & (gnl|cdd|66750 : 351.0) no description available & (reliability: 990.0) & (original description: Putative NDL2, Description = AT5g11790/T22P22_180, PFAM = PF03096)' T '34.24' 'transport.nitrite' '' '' '34.30' 'transport.H+ transporting pyrophosphatase' 'nbv0.3scaffold77872_147-7585' '(p21616|avp_phaau : 1212.0) Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase) - Phaseolus aureus (Mung bean) (Vigna radiata) & (at1g15690 : 1198.0) Encodes a H(+)-translocating (pyrophosphate-energized) inorganic pyrophosphatase (H(+)-PPase; EC 3.6.1.1) located in the vacuolar membrane. Expression is found in all tissues examined, including meristems and floral organ primordium. Expression is particularly enhanced in pollen, and is repressed by light. Over expression and loss of function phenotypes suggest AVP1 is involved in regulation of apoplastic pH and auxin transport. The effect on auxin transport likely involves effects of extracellular pH on subcellular localization of auxin efflux carriers such as PIN1.; AVP1; FUNCTIONS IN: hydrogen-translocating pyrophosphatase activity; INVOLVED IN: response to water deprivation, response to salt stress, establishment or maintenance of transmembrane electrochemical gradient, leaf development, auxin polar transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic H+ pyrophosphatase (InterPro:IPR004131); BEST Arabidopsis thaliana protein match is: Inorganic H pyrophosphatase family protein (TAIR:AT1G16780.1); Has 5891 Blast hits to 5869 proteins in 792 species: Archae - 67; Bacteria - 1317; Metazoa - 5; Fungi - 0; Plants - 299; Viruses - 0; Other Eukaryotes - 4203 (source: NCBI BLink). & (gnl|cdd|66687 : 826.0) no description available & (reliability: 2396.0) & (original description: Putative ppa, Description = Inorganic pyrophosphatase, PFAM = PF03030;PF03030)' T '34.30' 'transport.H+ transporting pyrophosphatase' 'nbv0.5scaffold4519_31293-46902' '(at1g16780 : 1183.0) Encodes a type II H+-PPases that localizes to and function as a proton pump of the Golgi apparatus in most tissues except for mature leaves.; VHP2;2; FUNCTIONS IN: inorganic diphosphatase activity, hydrogen-translocating pyrophosphatase activity; INVOLVED IN: proton transport; LOCATED IN: Golgi apparatus, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic H+ pyrophosphatase (InterPro:IPR004131); BEST Arabidopsis thaliana protein match is: vacuolar H+-pyrophosphatase 2 (TAIR:AT1G78920.2); Has 6490 Blast hits to 6472 proteins in 788 species: Archae - 67; Bacteria - 1308; Metazoa - 5; Fungi - 1; Plants - 281; Viruses - 0; Other Eukaryotes - 4828 (source: NCBI BLink). & (gnl|cdd|66687 : 788.0) no description available & (q06572|avp_horvu : 384.0) Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) - Hordeum vulgare (Barley) & (reliability: 2366.0) & (original description: Putative AVPL1, Description = Pyrophosphate-energized membrane proton pump 2, PFAM = PF03030)' T '34.30' 'transport.H+ transporting pyrophosphatase' 'nbv0.5scaffold8349_1-10300' '(p21616|avp_phaau : 1273.0) Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase) - Phaseolus aureus (Mung bean) (Vigna radiata) & (at1g15690 : 1238.0) Encodes a H(+)-translocating (pyrophosphate-energized) inorganic pyrophosphatase (H(+)-PPase; EC 3.6.1.1) located in the vacuolar membrane. Expression is found in all tissues examined, including meristems and floral organ primordium. Expression is particularly enhanced in pollen, and is repressed by light. Over expression and loss of function phenotypes suggest AVP1 is involved in regulation of apoplastic pH and auxin transport. The effect on auxin transport likely involves effects of extracellular pH on subcellular localization of auxin efflux carriers such as PIN1.; AVP1; FUNCTIONS IN: hydrogen-translocating pyrophosphatase activity; INVOLVED IN: response to water deprivation, response to salt stress, establishment or maintenance of transmembrane electrochemical gradient, leaf development, auxin polar transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic H+ pyrophosphatase (InterPro:IPR004131); BEST Arabidopsis thaliana protein match is: Inorganic H pyrophosphatase family protein (TAIR:AT1G16780.1); Has 5891 Blast hits to 5869 proteins in 792 species: Archae - 67; Bacteria - 1317; Metazoa - 5; Fungi - 0; Plants - 299; Viruses - 0; Other Eukaryotes - 4203 (source: NCBI BLink). & (gnl|cdd|66687 : 863.0) no description available & (reliability: 2476.0) & (original description: Putative ppa, Description = Inorganic pyrophosphatase, PFAM = PF03030)' T '34.30' 'transport.H+ transporting pyrophosphatase' 'niben101scf00332_623029-630546' '(at1g15690 : 1123.0) Encodes a H(+)-translocating (pyrophosphate-energized) inorganic pyrophosphatase (H(+)-PPase; EC 3.6.1.1) located in the vacuolar membrane. Expression is found in all tissues examined, including meristems and floral organ primordium. Expression is particularly enhanced in pollen, and is repressed by light. Over expression and loss of function phenotypes suggest AVP1 is involved in regulation of apoplastic pH and auxin transport. The effect on auxin transport likely involves effects of extracellular pH on subcellular localization of auxin efflux carriers such as PIN1.; AVP1; FUNCTIONS IN: hydrogen-translocating pyrophosphatase activity; INVOLVED IN: response to water deprivation, response to salt stress, establishment or maintenance of transmembrane electrochemical gradient, leaf development, auxin polar transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic H+ pyrophosphatase (InterPro:IPR004131); BEST Arabidopsis thaliana protein match is: Inorganic H pyrophosphatase family protein (TAIR:AT1G16780.1); Has 5891 Blast hits to 5869 proteins in 792 species: Archae - 67; Bacteria - 1317; Metazoa - 5; Fungi - 0; Plants - 299; Viruses - 0; Other Eukaryotes - 4203 (source: NCBI BLink). & (q06572|avp_horvu : 1113.0) Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) - Hordeum vulgare (Barley) & (gnl|cdd|66687 : 860.0) no description available & (reliability: 2246.0) & (original description: Putative hppA, Description = Putative K(+)-stimulated pyrophosphate-energized sodium pump, PFAM = PF03030)' T '34.30' 'transport.H+ transporting pyrophosphatase' 'niben101scf01453_732892-745800' '(at1g16780 : 1180.0) Encodes a type II H+-PPases that localizes to and function as a proton pump of the Golgi apparatus in most tissues except for mature leaves.; VHP2;2; FUNCTIONS IN: inorganic diphosphatase activity, hydrogen-translocating pyrophosphatase activity; INVOLVED IN: proton transport; LOCATED IN: Golgi apparatus, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic H+ pyrophosphatase (InterPro:IPR004131); BEST Arabidopsis thaliana protein match is: vacuolar H+-pyrophosphatase 2 (TAIR:AT1G78920.2); Has 6490 Blast hits to 6472 proteins in 788 species: Archae - 67; Bacteria - 1308; Metazoa - 5; Fungi - 1; Plants - 281; Viruses - 0; Other Eukaryotes - 4828 (source: NCBI BLink). & (gnl|cdd|66687 : 793.0) no description available & (q06572|avp_horvu : 387.0) Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) - Hordeum vulgare (Barley) & (reliability: 2360.0) & (original description: Putative AVPL1, Description = Pyrophosphate-energized membrane proton pump 2, PFAM = PF03030)' T '34.30' 'transport.H+ transporting pyrophosphatase' 'niben101scf02455_117553-125632' '(at1g15690 : 1240.0) Encodes a H(+)-translocating (pyrophosphate-energized) inorganic pyrophosphatase (H(+)-PPase; EC 3.6.1.1) located in the vacuolar membrane. Expression is found in all tissues examined, including meristems and floral organ primordium. Expression is particularly enhanced in pollen, and is repressed by light. Over expression and loss of function phenotypes suggest AVP1 is involved in regulation of apoplastic pH and auxin transport. The effect on auxin transport likely involves effects of extracellular pH on subcellular localization of auxin efflux carriers such as PIN1.; AVP1; FUNCTIONS IN: hydrogen-translocating pyrophosphatase activity; INVOLVED IN: response to water deprivation, response to salt stress, establishment or maintenance of transmembrane electrochemical gradient, leaf development, auxin polar transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic H+ pyrophosphatase (InterPro:IPR004131); BEST Arabidopsis thaliana protein match is: Inorganic H pyrophosphatase family protein (TAIR:AT1G16780.1); Has 5891 Blast hits to 5869 proteins in 792 species: Archae - 67; Bacteria - 1317; Metazoa - 5; Fungi - 0; Plants - 299; Viruses - 0; Other Eukaryotes - 4203 (source: NCBI BLink). & (p21616|avp_phaau : 1216.0) Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase) - Phaseolus aureus (Mung bean) (Vigna radiata) & (gnl|cdd|66687 : 883.0) no description available & (reliability: 2480.0) & (original description: Putative hppA, Description = Putative K(+)-stimulated pyrophosphate-energized sodium pump, PFAM = PF03030)' T '34.30' 'transport.H+ transporting pyrophosphatase' 'niben101scf03224_697230-703986' '(at1g15690 : 1226.0) Encodes a H(+)-translocating (pyrophosphate-energized) inorganic pyrophosphatase (H(+)-PPase; EC 3.6.1.1) located in the vacuolar membrane. Expression is found in all tissues examined, including meristems and floral organ primordium. Expression is particularly enhanced in pollen, and is repressed by light. Over expression and loss of function phenotypes suggest AVP1 is involved in regulation of apoplastic pH and auxin transport. The effect on auxin transport likely involves effects of extracellular pH on subcellular localization of auxin efflux carriers such as PIN1.; AVP1; FUNCTIONS IN: hydrogen-translocating pyrophosphatase activity; INVOLVED IN: response to water deprivation, response to salt stress, establishment or maintenance of transmembrane electrochemical gradient, leaf development, auxin polar transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic H+ pyrophosphatase (InterPro:IPR004131); BEST Arabidopsis thaliana protein match is: Inorganic H pyrophosphatase family protein (TAIR:AT1G16780.1); Has 5891 Blast hits to 5869 proteins in 792 species: Archae - 67; Bacteria - 1317; Metazoa - 5; Fungi - 0; Plants - 299; Viruses - 0; Other Eukaryotes - 4203 (source: NCBI BLink). & (p21616|avp_phaau : 1217.0) Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase) - Phaseolus aureus (Mung bean) (Vigna radiata) & (gnl|cdd|66687 : 879.0) no description available & (reliability: 2452.0) & (original description: Putative hppA, Description = Putative K(+)-stimulated pyrophosphate-energized sodium pump, PFAM = PF03030)' T '34.30' 'transport.H+ transporting pyrophosphatase' 'niben101scf04918_572088-579651' '(p21616|avp_phaau : 1259.0) Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase) - Phaseolus aureus (Mung bean) (Vigna radiata) & (at1g15690 : 1245.0) Encodes a H(+)-translocating (pyrophosphate-energized) inorganic pyrophosphatase (H(+)-PPase; EC 3.6.1.1) located in the vacuolar membrane. Expression is found in all tissues examined, including meristems and floral organ primordium. Expression is particularly enhanced in pollen, and is repressed by light. Over expression and loss of function phenotypes suggest AVP1 is involved in regulation of apoplastic pH and auxin transport. The effect on auxin transport likely involves effects of extracellular pH on subcellular localization of auxin efflux carriers such as PIN1.; AVP1; FUNCTIONS IN: hydrogen-translocating pyrophosphatase activity; INVOLVED IN: response to water deprivation, response to salt stress, establishment or maintenance of transmembrane electrochemical gradient, leaf development, auxin polar transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic H+ pyrophosphatase (InterPro:IPR004131); BEST Arabidopsis thaliana protein match is: Inorganic H pyrophosphatase family protein (TAIR:AT1G16780.1); Has 5891 Blast hits to 5869 proteins in 792 species: Archae - 67; Bacteria - 1317; Metazoa - 5; Fungi - 0; Plants - 299; Viruses - 0; Other Eukaryotes - 4203 (source: NCBI BLink). & (gnl|cdd|66687 : 863.0) no description available & (reliability: 2490.0) & (original description: Putative ppa, Description = Inorganic pyrophosphatase, PFAM = PF03030)' T '34.30' 'transport.H+ transporting pyrophosphatase' 'niben101scf05220_8525-16135' '(p21616|avp_phaau : 1256.0) Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase) - Phaseolus aureus (Mung bean) (Vigna radiata) & (at1g15690 : 1237.0) Encodes a H(+)-translocating (pyrophosphate-energized) inorganic pyrophosphatase (H(+)-PPase; EC 3.6.1.1) located in the vacuolar membrane. Expression is found in all tissues examined, including meristems and floral organ primordium. Expression is particularly enhanced in pollen, and is repressed by light. Over expression and loss of function phenotypes suggest AVP1 is involved in regulation of apoplastic pH and auxin transport. The effect on auxin transport likely involves effects of extracellular pH on subcellular localization of auxin efflux carriers such as PIN1.; AVP1; FUNCTIONS IN: hydrogen-translocating pyrophosphatase activity; INVOLVED IN: response to water deprivation, response to salt stress, establishment or maintenance of transmembrane electrochemical gradient, leaf development, auxin polar transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic H+ pyrophosphatase (InterPro:IPR004131); BEST Arabidopsis thaliana protein match is: Inorganic H pyrophosphatase family protein (TAIR:AT1G16780.1); Has 5891 Blast hits to 5869 proteins in 792 species: Archae - 67; Bacteria - 1317; Metazoa - 5; Fungi - 0; Plants - 299; Viruses - 0; Other Eukaryotes - 4203 (source: NCBI BLink). & (gnl|cdd|66687 : 859.0) no description available & (reliability: 2474.0) & (original description: Putative ppa, Description = Inorganic pyrophosphatase, PFAM = PF03030)' T '34.98' 'transport.membrane system unknown' 'niben101scf05645_836856-839488' '(at3g47420 : 263.0) Encodes a Pi starvation-responsive protein AtPS3.; phosphate starvation-induced gene 3 (PS3); FUNCTIONS IN: sugar:hydrogen symporter activity; INVOLVED IN: carbohydrate transport, transmembrane transport; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G30560.1); Has 26325 Blast hits to 26083 proteins in 2250 species: Archae - 498; Bacteria - 20836; Metazoa - 940; Fungi - 2597; Plants - 303; Viruses - 0; Other Eukaryotes - 1151 (source: NCBI BLink). & (gnl|cdd|37744 : 120.0) no description available & (reliability: 526.0) & (original description: Putative Ci2, Description = Sugar phosphate exchanger 2, PFAM = PF07690)' T '34.98' 'transport.membrane system unknown' 'niben101scf07599_108112-111799' '(at3g47420 : 684.0) Encodes a Pi starvation-responsive protein AtPS3.; phosphate starvation-induced gene 3 (PS3); FUNCTIONS IN: sugar:hydrogen symporter activity; INVOLVED IN: carbohydrate transport, transmembrane transport; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G30560.1); Has 26325 Blast hits to 26083 proteins in 2250 species: Archae - 498; Bacteria - 20836; Metazoa - 940; Fungi - 2597; Plants - 303; Viruses - 0; Other Eukaryotes - 1151 (source: NCBI BLink). & (gnl|cdd|37744 : 339.0) no description available & (gnl|cdd|32452 : 171.0) no description available & (reliability: 1368.0) & (original description: Putative At3g47420, Description = Putative glycerol-3-phosphate transporter 1, PFAM = PF07690)' T '34.98' 'transport.membrane system unknown' 'niben101scf16105_5277-9272' '(at2g13100 : 539.0) Major facilitator superfamily protein; FUNCTIONS IN: sugar:hydrogen symporter activity; INVOLVED IN: carbohydrate transport, transmembrane transport; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate starvation-induced gene 3 (TAIR:AT3G47420.1); Has 5848 Blast hits to 5578 proteins in 1255 species: Archae - 36; Bacteria - 4849; Metazoa - 431; Fungi - 50; Plants - 276; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|37744 : 297.0) no description available & (gnl|cdd|32452 : 161.0) no description available & (reliability: 1078.0) & (original description: Putative At2g13100, Description = Putative glycerol-3-phosphate transporter 5, PFAM = PF07690)' T '34.99' 'transport.misc' 'nbv0.3scaffold3901_13784-21145' '(at2g38330 : 417.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G38380.1); Has 17219 Blast hits to 17166 proteins in 2310 species: Archae - 394; Bacteria - 13798; Metazoa - 83; Fungi - 156; Plants - 607; Viruses - 0; Other Eukaryotes - 2181 (source: NCBI BLink). & (gnl|cdd|30880 : 165.0) no description available & (gnl|cdd|36561 : 147.0) no description available & (reliability: 834.0) & (original description: Putative DTX44, Description = Protein DETOXIFICATION 44, chloroplastic, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'nbv0.3scaffold4136_47912-53763' '(at1g23300 : 474.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT3G26590.1); Has 9654 Blast hits to 9598 proteins in 1955 species: Archae - 179; Bacteria - 6865; Metazoa - 142; Fungi - 320; Plants - 1342; Viruses - 0; Other Eukaryotes - 806 (source: NCBI BLink). & (gnl|cdd|36561 : 401.0) no description available & (gnl|cdd|30880 : 149.0) no description available & (reliability: 948.0) & (original description: Putative DTX29, Description = Protein DETOXIFICATION 29, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'nbv0.3scaffold10494_32418-45265' '(at2g17500 : 466.0) Auxin efflux carrier family protein; FUNCTIONS IN: auxin:hydrogen symporter activity; INVOLVED IN: auxin polar transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT5G65980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37933 : 433.0) no description available & (gnl|cdd|86363 : 190.0) no description available & (reliability: 932.0) & (original description: Putative PILS5, Description = Protein PIN-LIKES 5, PFAM = PF03547)' T '34.99' 'transport.misc' 'nbv0.3scaffold12320_9074-13650' '(at1g33110 : 522.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G33100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36561 : 376.0) no description available & (gnl|cdd|30880 : 129.0) no description available & (reliability: 1044.0) & (original description: Putative DTX21, Description = Protein DETOXIFICATION 21, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'nbv0.3scaffold12649_7461-16014' '(at2g21520 : 859.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36684 : 275.0) no description available & (gnl|cdd|84928 : 139.0) no description available & (reliability: 1718.0) & (original description: Putative SFH8, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH8, PFAM = PF00650;PF03765)' T '34.99' 'transport.misc' 'nbv0.3scaffold20406_2929-5996' '(at3g12740 : 507.0) Physically interacts with ALA3, and is required for the phospholipid translocase activity of ALA3.; ALA-interacting subunit 1 (ALIS1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284, transmembrane eukaryotic (InterPro:IPR005045); BEST Arabidopsis thaliana protein match is: LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein (TAIR:AT1G54320.1); Has 864 Blast hits to 864 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 234; Plants - 160; Viruses - 0; Other Eukaryotes - 218 (source: NCBI BLink). & (gnl|cdd|38163 : 411.0) no description available & (gnl|cdd|67019 : 305.0) no description available & (reliability: 934.0) & (original description: Putative ALIS1, Description = ALA-interacting subunit 1, PFAM = PF03381)' T '34.99' 'transport.misc' 'nbv0.3scaffold21014_29100-32640' '(at3g10960 : 798.0) Encodes a homolog of the adenine-guanine-hypoxanthine transporter AzgA of Aspergillus nidulans. Function as a plant adenine-guanine transporter. Two closely related genes exist in Arabidopsis: AT3G10960 (Azg1) and AT5G50300 (Azg2).; AZA-guanine resistant1 (AZG1); FUNCTIONS IN: transmembrane transporter activity, purine transmembrane transporter activity; INVOLVED IN: purine transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil permease family protein (TAIR:AT5G50300.1); Has 8325 Blast hits to 8321 proteins in 1933 species: Archae - 105; Bacteria - 6300; Metazoa - 12; Fungi - 117; Plants - 83; Viruses - 0; Other Eukaryotes - 1708 (source: NCBI BLink). & (gnl|cdd|32433 : 298.0) no description available & (reliability: 1596.0) & (original description: Putative AZG1, Description = Adenine/guanine permease AZG1, PFAM = PF00860)' T '34.99' 'transport.misc' 'nbv0.3scaffold23270_15306-23381' '(at4g38050 : 759.0) Xanthine/uracil permease family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: nucleobase-ascorbate transporter 12 (TAIR:AT2G27810.1); Has 9537 Blast hits to 9467 proteins in 1922 species: Archae - 69; Bacteria - 7876; Metazoa - 365; Fungi - 138; Plants - 431; Viruses - 1; Other Eukaryotes - 657 (source: NCBI BLink). & (gnl|cdd|36506 : 540.0) no description available & (gnl|cdd|85076 : 191.0) no description available & (reliability: 1518.0) & (original description: Putative NAT11, Description = Nucleobase-ascorbate transporter 11, PFAM = PF00860)' T '34.99' 'transport.misc' 'nbv0.3scaffold24889_7619-14536' '(at1g71140 : 395.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G15150.1); Has 10143 Blast hits to 10059 proteins in 1990 species: Archae - 227; Bacteria - 7201; Metazoa - 146; Fungi - 330; Plants - 1347; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink). & (gnl|cdd|36561 : 348.0) no description available & (gnl|cdd|30880 : 139.0) no description available & (reliability: 790.0) & (original description: Putative DTX14, Description = Protein DETOXIFICATION 14, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'nbv0.3scaffold29422_7294-10044' '(at2g04090 : 120.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G04100.1); Has 9714 Blast hits to 9643 proteins in 1968 species: Archae - 172; Bacteria - 6792; Metazoa - 143; Fungi - 326; Plants - 1316; Viruses - 0; Other Eukaryotes - 965 (source: NCBI BLink). & (gnl|cdd|36561 : 92.8) no description available & (reliability: 240.0) & (original description: Putative T401, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554)' T '34.99' 'transport.misc' 'nbv0.3scaffold34036_1873-19420' '(at1g25500 : 596.0) Plasma-membrane choline transporter family protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF580 (InterPro:IPR007603); BEST Arabidopsis thaliana protein match is: Plasma-membrane choline transporter family protein (TAIR:AT5G13760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36576 : 261.0) no description available & (gnl|cdd|68100 : 231.0) no description available & (reliability: 1192.0) & (original description: Putative Sb04g024030, Description = Putative uncharacterized protein Sb04g024030, PFAM = PF04515)' T '34.99' 'transport.misc' 'nbv0.3scaffold34413_1-22404' '(at5g38030 : 434.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to nematode; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT3G26590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36561 : 308.0) no description available & (gnl|cdd|30880 : 124.0) no description available & (reliability: 868.0) & (original description: Putative RHS2, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'nbv0.3scaffold34710_1613-6096' '(at1g04570 : 443.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Biopterin transport-related protein BT1 (InterPro:IPR004324), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G33280.1); Has 816 Blast hits to 814 proteins in 271 species: Archae - 6; Bacteria - 387; Metazoa - 0; Fungi - 18; Plants - 232; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (gnl|cdd|66747 : 289.0) no description available & (reliability: 886.0) & (original description: Putative At2g33280, Description = Probable folate-biopterin transporter 9, chloroplastic, PFAM = PF03092)' T '34.99' 'transport.misc' 'nbv0.3scaffold39780_10725-18725' '(at1g79450 : 462.0) ALA-interacting subunit 5 (ALIS5); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid lumen, plasma membrane, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284, transmembrane eukaryotic (InterPro:IPR005045); BEST Arabidopsis thaliana protein match is: LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein (TAIR:AT1G16360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38163 : 373.0) no description available & (gnl|cdd|67019 : 280.0) no description available & (reliability: 868.0) & (original description: Putative Os05g0529900, Description = Os05g0529900 protein, PFAM = PF03381)' T '34.99' 'transport.misc' 'nbv0.3scaffold43113_1-3470' '(at1g04560 : 211.0) AWPM-19-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like family protein (TAIR:AT5G46530.1); Has 177 Blast hits to 177 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69056 : 157.0) no description available & (reliability: 422.0) & (original description: Putative GmPM3, Description = PGmPM3, PFAM = PF05512)' T '34.99' 'transport.misc' 'nbv0.3scaffold45792_971-5931' '(at3g21690 : 533.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G61890.1); Has 11325 Blast hits to 11232 proteins in 2038 species: Archae - 269; Bacteria - 8227; Metazoa - 142; Fungi - 332; Plants - 1357; Viruses - 0; Other Eukaryotes - 998 (source: NCBI BLink). & (gnl|cdd|36561 : 404.0) no description available & (gnl|cdd|30880 : 158.0) no description available & (reliability: 1066.0) & (original description: Putative DTX40, Description = Protein DETOXIFICATION 40, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'nbv0.3scaffold47363_2668-5890' '(gnl|cdd|38298 : 142.0) no description available & (at1g61250 : 134.0) Encodes a putative secretory carrier membrane protein (SC3).; secretory carrier 3 (SC3); FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: protein transport; CONTAINS InterPro DOMAIN/s: SCAMP (InterPro:IPR007273); BEST Arabidopsis thaliana protein match is: Secretory carrier membrane protein (SCAMP) family protein (TAIR:AT1G11180.1). & (reliability: 268.0) & (original description: Putative Os08g0161750, Description = Os08g0161750 protein, PFAM = PF04144)' T '34.99' 'transport.misc' 'nbv0.3scaffold48514_113-13038' '(at2g27810 : 597.0) nucleobase-ascorbate transporter 12; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil permease family protein (TAIR:AT4G38050.1); Has 8924 Blast hits to 8893 proteins in 1864 species: Archae - 69; Bacteria - 7265; Metazoa - 476; Fungi - 122; Plants - 377; Viruses - 11; Other Eukaryotes - 604 (source: NCBI BLink). & (gnl|cdd|36506 : 389.0) no description available & (gnl|cdd|85076 : 124.0) no description available & (reliability: 1194.0) & (original description: Putative Os01g0857500, Description = Nucleobase-ascorbate transporter-like protein, PFAM = PF00860)' T '34.99' 'transport.misc' 'nbv0.3scaffold61995_2762-9950' '(at1g17500 : 1830.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, ATP biosynthetic process, phospholipid transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G72700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35427 : 1525.0) no description available & (gnl|cdd|30822 : 282.0) no description available & (reliability: 3660.0) & (original description: Putative ALA4, Description = Probable phospholipid-transporting ATPase 4, PFAM = PF16212;PF13246;PF16209)' T '34.99' 'transport.misc' 'nbv0.3scaffold63299_840-9206' '(at1g78130 : 415.0) unfertilized embryo sac 2 (UNE2); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G10190.1); Has 16910 Blast hits to 16851 proteins in 2099 species: Archae - 450; Bacteria - 14339; Metazoa - 386; Fungi - 319; Plants - 340; Viruses - 3; Other Eukaryotes - 1073 (source: NCBI BLink). & (gnl|cdd|36544 : 276.0) no description available & (reliability: 792.0) & (original description: Putative UNE2, Description = Transporter-like protein, PFAM = PF07690)' T '34.99' 'transport.misc' 'nbv0.3scaffold66751_5961-9905' '(at5g60800 : 119.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G36950.1). & (reliability: 238.0) & (original description: Putative BnaA04g21160D, Description = BnaA04g21160D protein, PFAM = PF00403;PF00403)' T '34.99' 'transport.misc' 'nbv0.3scaffold75720_2590-8021' '(at3g15380 : 795.0) Plasma-membrane choline transporter family protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF580 (InterPro:IPR007603); Has 948 Blast hits to 937 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 503; Fungi - 120; Plants - 118; Viruses - 0; Other Eukaryotes - 207 (source: NCBI BLink). & (gnl|cdd|36576 : 291.0) no description available & (gnl|cdd|68100 : 283.0) no description available & (reliability: 1590.0) & (original description: Putative BnaC03g39120D, Description = BnaC03g39120D protein, PFAM = PF04515)' T '34.99' 'transport.misc' 'nbv0.3scaffold94913_1678-4704' '(at3g21690 : 268.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G61890.1); Has 11325 Blast hits to 11232 proteins in 2038 species: Archae - 269; Bacteria - 8227; Metazoa - 142; Fungi - 332; Plants - 1357; Viruses - 0; Other Eukaryotes - 998 (source: NCBI BLink). & (gnl|cdd|36561 : 176.0) no description available & (reliability: 536.0) & (original description: Putative Os03g0571900, Description = Os03g0571900 protein, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'nbv0.5scaffold325_302426-308131' '(at2g21540 : 608.0) SEC14-like 3 (SFH3); FUNCTIONS IN: phosphatidylinositol transporter activity; INVOLVED IN: flower development, transport; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39180.1). & (gnl|cdd|36684 : 269.0) no description available & (gnl|cdd|84928 : 142.0) no description available & (reliability: 1108.0) & (original description: Putative SFH12, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH12, PFAM = PF03765;PF00650)' T '34.99' 'transport.misc' 'nbv0.5scaffold379_605241-621470' '(at3g43790 : 528.0) zinc induced facilitator-like 2 (ZIFL2); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: zinc induced facilitator-like 1 (TAIR:AT5G13750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37826 : 348.0) no description available & (gnl|cdd|87335 : 94.0) no description available & (reliability: 1048.0) & (original description: Putative ZIFL1, Description = Protein ZINC INDUCED FACILITATOR-LIKE 1, PFAM = PF07690)' T '34.99' 'transport.misc' 'nbv0.5scaffold1093_167913-186141' '(at3g21690 : 642.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G61890.1); Has 11325 Blast hits to 11232 proteins in 2038 species: Archae - 269; Bacteria - 8227; Metazoa - 142; Fungi - 332; Plants - 1357; Viruses - 0; Other Eukaryotes - 998 (source: NCBI BLink). & (gnl|cdd|36561 : 444.0) no description available & (gnl|cdd|30880 : 179.0) no description available & (reliability: 1284.0) & (original description: Putative RHS2, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'nbv0.5scaffold1112_118096-122367' '(at5g58070 : 222.0) Encodes a temperature-induced lipocalin TIL1. Involved in thermotolerance. Peripherally associated with plasma membrane.; temperature-induced lipocalin (TIL); FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, response to cold, response to light stimulus, response to heat; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Lipocalin, bacterial (InterPro:IPR002446), Lipocalin, ApoD type (InterPro:IPR022271), Lipocalin-like (InterPro:IPR013208), Lipocalin conserved site (InterPro:IPR022272), Calycin (InterPro:IPR012674), Calycin-like (InterPro:IPR011038); Has 2007 Blast hits to 1991 proteins in 692 species: Archae - 0; Bacteria - 1480; Metazoa - 169; Fungi - 10; Plants - 132; Viruses - 6; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|40021 : 147.0) no description available & (gnl|cdd|87463 : 126.0) no description available & (reliability: 444.0) & (original description: Putative TIL, Description = Temperature-induced lipocalin, PFAM = PF08212)' T '34.99' 'transport.misc' 'nbv0.5scaffold1902_120997-125077' '(at5g60800 : 109.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G36950.1). & (reliability: 218.0) & (original description: Putative HIPP3, Description = Heavy metal-associated domain, HMA, PFAM = PF00403;PF00403)' T '34.99' 'transport.misc' 'nbv0.5scaffold2277_56186-58710' '(at1g73700 : 88.2) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G52450.1); Has 10814 Blast hits to 10714 proteins in 1986 species: Archae - 254; Bacteria - 7697; Metazoa - 157; Fungi - 330; Plants - 1356; Viruses - 0; Other Eukaryotes - 1020 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative RIP, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554)' T '34.99' 'transport.misc' 'nbv0.5scaffold2318_117952-125373' '(at1g51340 : 484.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT3G08040.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30880 : 149.0) no description available & (gnl|cdd|36561 : 140.0) no description available & (reliability: 968.0) & (original description: Putative DTX42, Description = Protein DETOXIFICATION 42, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'nbv0.5scaffold2409_316936-320484' '(at5g60800 : 128.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G36950.1). & (reliability: 256.0) & (original description: Putative A15, Description = Heavy metal transport/detoxification superfamily protein, putative, PFAM = PF00403;PF00403)' T '34.99' 'transport.misc' 'nbv0.5scaffold2461_38583-41662' '(at3g12740 : 486.0) Physically interacts with ALA3, and is required for the phospholipid translocase activity of ALA3.; ALA-interacting subunit 1 (ALIS1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284, transmembrane eukaryotic (InterPro:IPR005045); BEST Arabidopsis thaliana protein match is: LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein (TAIR:AT1G54320.1); Has 864 Blast hits to 864 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 234; Plants - 160; Viruses - 0; Other Eukaryotes - 218 (source: NCBI BLink). & (gnl|cdd|38163 : 401.0) no description available & (gnl|cdd|67019 : 298.0) no description available & (reliability: 882.0) & (original description: Putative chat-1, Description = CDC50 family protein chat-1, PFAM = PF03381)' T '34.99' 'transport.misc' 'nbv0.5scaffold2469_60591-63773' '(at3g59280 : 141.0) mutant exhibited resistance to growth on media containing thaxtomin due to a difference in the rate of uptake of the toxin.We proposed that TXR1 is a component of, or regulator of, a dispensable transport mechanism.; THAXTOMIN A RESISTANT 1 (TXR1); INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein Transporter, Pam16 (InterPro:IPR005341); BEST Arabidopsis thaliana protein match is: Protein Transporter, Pam16 (TAIR:AT5G61880.2); Has 398 Blast hits to 398 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 132; Plants - 79; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|38652 : 101.0) no description available & (reliability: 282.0) & (original description: Putative TXR1, Description = AT3g59280/F25L23_140, PFAM = PF03656)' T '34.99' 'transport.misc' 'nbv0.5scaffold2826_25278-33326' '(at1g51340 : 440.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT3G08040.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36561 : 116.0) no description available & (gnl|cdd|30880 : 99.5) no description available & (reliability: 880.0) & (original description: Putative mate2, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'nbv0.5scaffold3046_61414-65923' '(at1g78130 : 627.0) unfertilized embryo sac 2 (UNE2); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G10190.1); Has 16910 Blast hits to 16851 proteins in 2099 species: Archae - 450; Bacteria - 14339; Metazoa - 386; Fungi - 319; Plants - 340; Viruses - 3; Other Eukaryotes - 1073 (source: NCBI BLink). & (gnl|cdd|36544 : 429.0) no description available & (gnl|cdd|87335 : 103.0) no description available & (reliability: 1178.0) & (original description: Putative At5g10190, Description = Major facilitator protein, PFAM = PF07690)' T '34.99' 'transport.misc' 'nbv0.5scaffold3083_182048-185575' '(at5g60800 : 109.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G36950.1). & (reliability: 218.0) & (original description: Putative BnaA03g08790D, Description = BnaA03g08790D protein, PFAM = PF00403;PF00403)' T '34.99' 'transport.misc' 'nbv0.5scaffold3206_151859-154802' '(at1g61250 : 174.0) Encodes a putative secretory carrier membrane protein (SC3).; secretory carrier 3 (SC3); FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: protein transport; CONTAINS InterPro DOMAIN/s: SCAMP (InterPro:IPR007273); BEST Arabidopsis thaliana protein match is: Secretory carrier membrane protein (SCAMP) family protein (TAIR:AT1G11180.1). & (gnl|cdd|38298 : 146.0) no description available & (gnl|cdd|67747 : 108.0) no description available & (reliability: 348.0) & (original description: Putative SC, Description = Secretory carrier membrane protein, PFAM = PF04144)' T '34.99' 'transport.misc' 'nbv0.5scaffold4098_97516-110071' '(at1g12950 : 598.0) root hair specific 2 (RSH2); FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: sperm cell, root hair, root; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT3G26590.1); Has 9730 Blast hits to 9684 proteins in 1960 species: Archae - 180; Bacteria - 6829; Metazoa - 143; Fungi - 326; Plants - 1351; Viruses - 0; Other Eukaryotes - 901 (source: NCBI BLink). & (gnl|cdd|36561 : 424.0) no description available & (gnl|cdd|30880 : 160.0) no description available & (reliability: 1196.0) & (original description: Putative DTX31, Description = Protein DETOXIFICATION 31, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'nbv0.5scaffold4617_212986-228202' '(at3g52640 : 769.0) Zn-dependent exopeptidases superfamily protein; INVOLVED IN: protein processing; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicastrin (InterPro:IPR008710); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37868 : 407.0) no description available & (gnl|cdd|68999 : 208.0) no description available & (reliability: 1538.0) & (original description: Putative At3g52640/At3g52650, Description = Nicastrin, PFAM = PF05450)' T '34.99' 'transport.misc' 'nbv0.5scaffold17338_1-1656' '(at1g71140 : 221.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G15150.1); Has 10143 Blast hits to 10059 proteins in 1990 species: Archae - 227; Bacteria - 7201; Metazoa - 146; Fungi - 330; Plants - 1347; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink). & (gnl|cdd|36561 : 191.0) no description available & (reliability: 442.0) & (original description: Putative DTX1, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben044scf00000715ctg035_6255-9731' '(at5g60800 : 112.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G36950.1). & (reliability: 224.0) & (original description: Putative BnaA04g21160D, Description = BnaA04g21160D protein, PFAM = PF00403;PF00403)' T '34.99' 'transport.misc' 'niben044scf00002054ctg012_14773-22894' '(at3g15380 : 1083.0) Plasma-membrane choline transporter family protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF580 (InterPro:IPR007603); Has 948 Blast hits to 937 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 503; Fungi - 120; Plants - 118; Viruses - 0; Other Eukaryotes - 207 (source: NCBI BLink). & (gnl|cdd|36576 : 353.0) no description available & (gnl|cdd|68100 : 296.0) no description available & (reliability: 2166.0) & (original description: Putative At3g15380, Description = Plasma-membrane choline transporter family protein, PFAM = PF04515)' T '34.99' 'transport.misc' 'niben044scf00003523ctg023_1-5770' '(at1g61250 : 298.0) Encodes a putative secretory carrier membrane protein (SC3).; secretory carrier 3 (SC3); FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: protein transport; CONTAINS InterPro DOMAIN/s: SCAMP (InterPro:IPR007273); BEST Arabidopsis thaliana protein match is: Secretory carrier membrane protein (SCAMP) family protein (TAIR:AT1G11180.1). & (gnl|cdd|38298 : 280.0) no description available & (gnl|cdd|67747 : 184.0) no description available & (reliability: 596.0) & (original description: Putative SC, Description = SCAMP-like protein, PFAM = PF04144)' T '34.99' 'transport.misc' 'niben044scf00004155ctg005_1949-6039' '(at1g58340 : 624.0) ZF14; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to nematode; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G29140.1); Has 10543 Blast hits to 10463 proteins in 2002 species: Archae - 229; Bacteria - 7598; Metazoa - 148; Fungi - 324; Plants - 1321; Viruses - 0; Other Eukaryotes - 923 (source: NCBI BLink). & (gnl|cdd|36561 : 395.0) no description available & (gnl|cdd|30880 : 187.0) no description available & (reliability: 1248.0) & (original description: Putative DTX48, Description = Protein DETOXIFICATION 48, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben044scf00004547ctg002_1-6326' '(at3g52640 : 494.0) Zn-dependent exopeptidases superfamily protein; INVOLVED IN: protein processing; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicastrin (InterPro:IPR008710); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37868 : 330.0) no description available & (gnl|cdd|68999 : 179.0) no description available & (reliability: 988.0) & (original description: Putative PGSC0003DMG400013310, Description = Nicastrin, putative, PFAM = PF05450)' T '34.99' 'transport.misc' 'niben044scf00005158ctg006_1437-12495' '(at2g32040 : 644.0) The At2g32040 gene product has been demonstrated to mediate folate monoglutamate transport involved in tetrahydrofolate biosynthesis. It also mediates transport of antifolates, such as methotrexate and aminopterin. The gene is expressed in both chloroplast and non-green plastids.; Major facilitator superfamily protein; FUNCTIONS IN: folic acid transporter activity, 5-formyltetrahydrofolate transporter activity, transporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily, general substrate transporter (InterPro:IPR016196), Biopterin transport-related protein BT1 (InterPro:IPR004324); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G25050.1); Has 2017 Blast hits to 1915 proteins in 421 species: Archae - 4; Bacteria - 671; Metazoa - 3; Fungi - 33; Plants - 272; Viruses - 0; Other Eukaryotes - 1034 (source: NCBI BLink). & (gnl|cdd|66747 : 407.0) no description available & (reliability: 1288.0) & (original description: Putative fbt, Description = Folate/biopterin transporter, PFAM = PF03092)' T '34.99' 'transport.misc' 'niben044scf00005355ctg015_1461-4661' '(at1g21900 : 212.0) emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT1G09580.1); Has 1629 Blast hits to 1627 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 735; Fungi - 476; Plants - 235; Viruses - 0; Other Eukaryotes - 183 (source: NCBI BLink). & (gnl|cdd|36904 : 204.0) no description available & (reliability: 424.0) & (original description: Putative CYB, Description = Transmembrane emp24 domain-containing protein 10, PFAM = PF01105)' T '34.99' 'transport.misc' 'niben044scf00005863ctg001_1-4962' '(at2g26510 : 169.0) permease; pigment defective embryo 135 (PDE135); FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil permease family protein (TAIR:AT2G05760.1). & (gnl|cdd|36506 : 127.0) no description available & (reliability: 338.0) & (original description: Putative LPE1, Description = Nucleobase-ascorbate transporter-like protein, PFAM = PF00860)' T '34.99' 'transport.misc' 'niben044scf00006891ctg003_6001-17115' '(at3g12740 : 496.0) Physically interacts with ALA3, and is required for the phospholipid translocase activity of ALA3.; ALA-interacting subunit 1 (ALIS1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284, transmembrane eukaryotic (InterPro:IPR005045); BEST Arabidopsis thaliana protein match is: LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein (TAIR:AT1G54320.1); Has 864 Blast hits to 864 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 234; Plants - 160; Viruses - 0; Other Eukaryotes - 218 (source: NCBI BLink). & (gnl|cdd|38163 : 398.0) no description available & (gnl|cdd|67019 : 297.0) no description available & (reliability: 948.0) & (original description: Putative ALIS1, Description = ALA-interacting subunit 1, PFAM = PF03381)' T '34.99' 'transport.misc' 'niben044scf00006952ctg002_23994-28457' '(at1g66760 : 416.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to wounding; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G66780.1); Has 11176 Blast hits to 10988 proteins in 2036 species: Archae - 239; Bacteria - 8105; Metazoa - 148; Fungi - 328; Plants - 1324; Viruses - 0; Other Eukaryotes - 1032 (source: NCBI BLink). & (gnl|cdd|36561 : 398.0) no description available & (gnl|cdd|30880 : 181.0) no description available & (reliability: 832.0) & (original description: Putative DTX1, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben044scf00007688ctg006_7298-10234' '(at5g01990 : 186.0) Auxin efflux carrier family protein; FUNCTIONS IN: auxin:hydrogen symporter activity; INVOLVED IN: auxin polar transport, transmembrane transport; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G71090.1); Has 514 Blast hits to 486 proteins in 113 species: Archae - 2; Bacteria - 6; Metazoa - 0; Fungi - 225; Plants - 217; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|37933 : 124.0) no description available & (reliability: 372.0) & (original description: Putative PINY, Description = Auxin efflux carrier family protein, PFAM = PF03547)' T '34.99' 'transport.misc' 'niben044scf00007893ctg006_1-3822' '(at4g36490 : 332.0) SEC14-like 12 (SFH12); CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT2G18180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36684 : 203.0) no description available & (gnl|cdd|84928 : 139.0) no description available & (reliability: 662.0) & (original description: Putative BnaC04g33440D, Description = BnaC04g33440D protein, PFAM = PF00650)' T '34.99' 'transport.misc' 'niben044scf00008129ctg011_15667-18874' '(at3g12740 : 511.0) Physically interacts with ALA3, and is required for the phospholipid translocase activity of ALA3.; ALA-interacting subunit 1 (ALIS1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284, transmembrane eukaryotic (InterPro:IPR005045); BEST Arabidopsis thaliana protein match is: LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein (TAIR:AT1G54320.1); Has 864 Blast hits to 864 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 234; Plants - 160; Viruses - 0; Other Eukaryotes - 218 (source: NCBI BLink). & (gnl|cdd|38163 : 414.0) no description available & (gnl|cdd|67019 : 310.0) no description available & (reliability: 938.0) & (original description: Putative ALIS1, Description = ALA-interacting subunit 1, PFAM = PF03381)' T '34.99' 'transport.misc' 'niben044scf00009077ctg005_1-1836' '(at3g21690 : 204.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G61890.1); Has 11325 Blast hits to 11232 proteins in 2038 species: Archae - 269; Bacteria - 8227; Metazoa - 142; Fungi - 332; Plants - 1357; Viruses - 0; Other Eukaryotes - 998 (source: NCBI BLink). & (gnl|cdd|36561 : 130.0) no description available & (reliability: 408.0) & (original description: Putative RHS2, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554)' T '34.99' 'transport.misc' 'niben044scf00009077ctg010_1353-4126' '(at3g21690 : 85.5) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G61890.1); Has 11325 Blast hits to 11232 proteins in 2038 species: Archae - 269; Bacteria - 8227; Metazoa - 142; Fungi - 332; Plants - 1357; Viruses - 0; Other Eukaryotes - 998 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative DTX40, Description = Multidrug and toxic compound extrusion protein, PFAM = )' T '34.99' 'transport.misc' 'niben044scf00011096ctg006_900-3401' '(at1g76520 : 120.0) Auxin efflux carrier family protein; FUNCTIONS IN: auxin:hydrogen symporter activity; INVOLVED IN: auxin polar transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G76530.1); Has 676 Blast hits to 645 proteins in 140 species: Archae - 2; Bacteria - 51; Metazoa - 0; Fungi - 244; Plants - 324; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (gnl|cdd|37933 : 111.0) no description available & (reliability: 240.0) & (original description: Putative AHS, Description = Auxin efflux carrier family protein, PFAM = PF03547)' T '34.99' 'transport.misc' 'niben044scf00011845ctg010_33871-36694' '(at5g65380 : 306.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, ripening, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G44050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36561 : 248.0) no description available & (gnl|cdd|30880 : 98.4) no description available & (reliability: 596.0) & (original description: Putative BnaC03g49010D, Description = BnaC03g49010D protein, PFAM = PF01554)' T '34.99' 'transport.misc' 'niben044scf00013437ctg007_3360-7612' '(at5g60800 : 91.3) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G36950.1). & (reliability: 182.6) & (original description: Putative A15, Description = Putative uncharacterized protein A15, PFAM = PF00403)' T '34.99' 'transport.misc' 'niben044scf00014430ctg003_9491-12837' '(at1g16390 : 300.0) organic cation/carnitine transporter 3 (3-Oct); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: organic cation/carnitine transporter 2 (TAIR:AT1G79360.1); Has 22920 Blast hits to 22877 proteins in 2010 species: Archae - 415; Bacteria - 11427; Metazoa - 4445; Fungi - 4126; Plants - 1629; Viruses - 0; Other Eukaryotes - 878 (source: NCBI BLink). & (gnl|cdd|35476 : 173.0) no description available & (gnl|cdd|84502 : 104.0) no description available & (reliability: 586.0) & (original description: Putative BnaC08g16940D, Description = BnaC08g16940D protein, PFAM = PF07690)' T '34.99' 'transport.misc' 'niben044scf00015414ctg019_8810-13911' '(o24381|tlc1_soltu : 1015.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (at1g80300 : 854.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (gnl|cdd|66864 : 649.0) no description available & (reliability: 1708.0) & (original description: Putative npt, Description = ADP,ATP carrier protein 1, PFAM = PF03219)' T '34.99' 'transport.misc' 'niben044scf00015940ctg011_15481-24419' '(at1g61250 : 368.0) Encodes a putative secretory carrier membrane protein (SC3).; secretory carrier 3 (SC3); FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: protein transport; CONTAINS InterPro DOMAIN/s: SCAMP (InterPro:IPR007273); BEST Arabidopsis thaliana protein match is: Secretory carrier membrane protein (SCAMP) family protein (TAIR:AT1G11180.1). & (gnl|cdd|38298 : 356.0) no description available & (gnl|cdd|67747 : 251.0) no description available & (reliability: 736.0) & (original description: Putative SCAMP3, Description = Secretory carrier-associated membrane protein 3, PFAM = PF04144)' T '34.99' 'transport.misc' 'niben044scf00016428ctg004_3343-7126' '(at1g04560 : 221.0) AWPM-19-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like family protein (TAIR:AT5G46530.1); Has 177 Blast hits to 177 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69056 : 161.0) no description available & (reliability: 442.0) & (original description: Putative GmPM3, Description = PGmPM3, PFAM = PF05512)' T '34.99' 'transport.misc' 'niben044scf00016699ctg004_18346-26881' '(at2g21520 : 903.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36684 : 276.0) no description available & (gnl|cdd|84928 : 139.0) no description available & (reliability: 1806.0) & (original description: Putative SFH8, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH8, PFAM = PF00650;PF03765)' T '34.99' 'transport.misc' 'niben044scf00017115ctg001_18145-24307' '(at5g63060 : 339.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G08690.1); Has 1770 Blast hits to 1770 proteins in 221 species: Archae - 0; Bacteria - 0; Metazoa - 487; Fungi - 470; Plants - 671; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (gnl|cdd|36683 : 182.0) no description available & (gnl|cdd|47819 : 89.3) no description available & (reliability: 678.0) & (original description: Putative At5g63060, Description = Sec14p-like phosphatidylinositol transfer family protein, PFAM = PF00650)' T '34.99' 'transport.misc' 'niben044scf00020235ctg000_1-2206' '(at3g62770 : 352.0) Required for autophagosome formation during nutrient deprivation and senescence.; AtATG18a; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: autophagy, leaf senescence, response to starvation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: homolog of yeast autophagy 18 (ATG18) D (TAIR:AT3G56440.1); Has 213 Blast hits to 211 proteins in 57 species: Archae - 0; Bacteria - 30; Metazoa - 48; Fungi - 45; Plants - 63; Viruses - 2; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|37322 : 306.0) no description available & (reliability: 704.0) & (original description: Putative pldZ, Description = WD repeat domain phosphoinositide-interacting protein 3, PFAM = )' T '34.99' 'transport.misc' 'niben044scf00022318ctg019_8507-13102' '(at1g71140 : 439.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G15150.1); Has 10143 Blast hits to 10059 proteins in 1990 species: Archae - 227; Bacteria - 7201; Metazoa - 146; Fungi - 330; Plants - 1347; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink). & (gnl|cdd|36561 : 429.0) no description available & (gnl|cdd|30880 : 176.0) no description available & (reliability: 878.0) & (original description: Putative DTX14, Description = Protein DETOXIFICATION 14, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben044scf00023707ctg001_6235-17115' '(at1g72560 : 1429.0) Encodes a karyopherin, specifically the Arabidopsis ortholog of LOS1/XPOT, a protein that mediates nuclear export of tRNAs in yeast and mammals. PSD is capable of rescuing the tRNA export defect of los1 in S. cerevisiae. psd mutants display disrupted initiation of the shoot apical meristem and delay leaf initiation after germination; they also display delayed transition from vegetative to reproductive development.; PAUSED (PSD); CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024). & (gnl|cdd|37232 : 955.0) no description available & (gnl|cdd|87516 : 122.0) no description available & (reliability: 2858.0) & (original description: Putative PSD, Description = Exportin-T, PFAM = PF08389)' T '34.99' 'transport.misc' 'niben044scf00024088ctg007_712-3173' '(at1g71140 : 163.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G15150.1); Has 10143 Blast hits to 10059 proteins in 1990 species: Archae - 227; Bacteria - 7201; Metazoa - 146; Fungi - 330; Plants - 1347; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink). & (gnl|cdd|36561 : 129.0) no description available & (reliability: 326.0) & (original description: Putative DTX2, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554)' T '34.99' 'transport.misc' 'niben044scf00024496ctg003_45-3156' '(at1g15170 : 369.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G15180.1); Has 8903 Blast hits to 8835 proteins in 2013 species: Archae - 124; Bacteria - 6072; Metazoa - 149; Fungi - 330; Plants - 1330; Viruses - 0; Other Eukaryotes - 898 (source: NCBI BLink). & (gnl|cdd|36561 : 340.0) no description available & (gnl|cdd|80909 : 118.0) no description available & (reliability: 738.0) & (original description: Putative DTX1, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554)' T '34.99' 'transport.misc' 'niben044scf00027531ctg001_1-2457' '(at1g73700 : 245.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G52450.1); Has 10814 Blast hits to 10714 proteins in 1986 species: Archae - 254; Bacteria - 7697; Metazoa - 157; Fungi - 330; Plants - 1356; Viruses - 0; Other Eukaryotes - 1020 (source: NCBI BLink). & (gnl|cdd|36561 : 190.0) no description available & (gnl|cdd|80909 : 84.0) no description available & (reliability: 490.0) & (original description: Putative DTX15, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554)' T '34.99' 'transport.misc' 'niben044scf00027563ctg002_12209-23631' '(at5g58030 : 348.0) Transport protein particle (TRAPP) component; CONTAINS InterPro DOMAIN/s: Transport protein particle (TRAPP) component (InterPro:IPR007194), TRAPP I complex, Trs31 (InterPro:IPR016696); Has 560 Blast hits to 545 proteins in 219 species: Archae - 0; Bacteria - 0; Metazoa - 199; Fungi - 199; Plants - 63; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (gnl|cdd|38525 : 260.0) no description available & (gnl|cdd|34729 : 175.0) no description available & (reliability: 696.0) & (original description: Putative trappc5, Description = Trafficking protein particle complex subunit 5, PFAM = PF04051)' T '34.99' 'transport.misc' 'niben044scf00029233ctg001_23431-27465' '(at5g60800 : 134.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G36950.1). & (reliability: 268.0) & (original description: Putative HIPP3, Description = Heavy metal-associated isoprenylated plant protein 3, PFAM = PF00403;PF00403)' T '34.99' 'transport.misc' 'niben044scf00030519ctg000_13027-16758' '(at1g64890 : 462.0) Major facilitator superfamily protein; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily, general substrate transporter (InterPro:IPR016196), Biopterin transport-related protein BT1 (InterPro:IPR004324); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G04570.1); Has 1088 Blast hits to 1079 proteins in 365 species: Archae - 17; Bacteria - 560; Metazoa - 42; Fungi - 5; Plants - 247; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|66747 : 303.0) no description available & (reliability: 924.0) & (original description: Putative At1g64890, Description = Probable folate-biopterin transporter 7, PFAM = PF03092;PF03092)' T '34.99' 'transport.misc' 'niben044scf00031847ctg005_41-6336' '(at1g26690 : 274.0) emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT1G69460.1); Has 1567 Blast hits to 1565 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 472; Plants - 246; Viruses - 0; Other Eukaryotes - 159 (source: NCBI BLink). & (gnl|cdd|36904 : 241.0) no description available & (reliability: 548.0) & (original description: Putative At1g26690, Description = Transmembrane emp24 domain-containing protein p24delta9, PFAM = PF01105)' T '34.99' 'transport.misc' 'niben044scf00035620ctg001_971-3721' '(at1g71140 : 132.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G15150.1); Has 10143 Blast hits to 10059 proteins in 1990 species: Archae - 227; Bacteria - 7201; Metazoa - 146; Fungi - 330; Plants - 1347; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink). & (gnl|cdd|36561 : 109.0) no description available & (reliability: 264.0) & (original description: Putative DTX9, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554)' T '34.99' 'transport.misc' 'niben044scf00037190ctg003_724-6258' '(at3g23550 : 484.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT3G23560.1); Has 11241 Blast hits to 11165 proteins in 2062 species: Archae - 263; Bacteria - 7905; Metazoa - 148; Fungi - 330; Plants - 1322; Viruses - 0; Other Eukaryotes - 1273 (source: NCBI BLink). & (gnl|cdd|36561 : 358.0) no description available & (gnl|cdd|30880 : 173.0) no description available & (reliability: 968.0) & (original description: Putative DTX18, Description = Protein DETOXIFICATION 18, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben044scf00038316ctg001_1-2928' '(at4g25640 : 316.0) Encodes a multidrug and toxin efflux family transporter. Involved in flavonoid metabolism, affecting Root growth, seed development and germination, and pollen development, release and viability.; detoxifying efflux carrier 35 (DTX35); FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: anther dehiscence, flavonoid metabolic process, pollen development; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G00350.1). & (gnl|cdd|36561 : 210.0) no description available & (gnl|cdd|65361 : 89.1) no description available & (reliability: 632.0) & (original description: Putative FFT, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554)' T '34.99' 'transport.misc' 'niben044scf00039909ctg001_12809-17413' '(at1g72160 : 370.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), GOLD (InterPro:IPR009038), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (TAIR:AT4G09160.1); Has 4473 Blast hits to 3903 proteins in 364 species: Archae - 35; Bacteria - 264; Metazoa - 1504; Fungi - 917; Plants - 883; Viruses - 13; Other Eukaryotes - 857 (source: NCBI BLink). & (gnl|cdd|36684 : 177.0) no description available & (gnl|cdd|29115 : 116.0) no description available & (reliability: 670.0) & (original description: Putative PATL2, Description = Patellin-2, PFAM = PF03765;PF00650)' T '34.99' 'transport.misc' 'niben044scf00046374ctg002_34231-38053' '(at1g65550 : 471.0) Xanthine/uracil permease family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil/vitamin C permease (TAIR:AT5G25420.1); Has 8520 Blast hits to 8482 proteins in 1844 species: Archae - 65; Bacteria - 6911; Metazoa - 346; Fungi - 119; Plants - 452; Viruses - 1; Other Eukaryotes - 626 (source: NCBI BLink). & (gnl|cdd|36506 : 466.0) no description available & (gnl|cdd|85076 : 144.0) no description available & (reliability: 942.0) & (original description: Putative NAT4, Description = Nucleobase-ascorbate transporter 4, PFAM = PF00860)' T '34.99' 'transport.misc' 'niben044scf00050092ctg003_7709-11874' '(at5g16860 : 494.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 92.8) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 898.0) & (original description: Putative crr2, Description = Pentatricopeptide repeat-containing family protein, PFAM = PF13041;PF01535;PF01535;PF01535;PF14432)' T '34.99' 'transport.misc' 'niben044scf00051060ctg002_10333-15610' '(at1g71870 : 561.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G29140.1); Has 10234 Blast hits to 10086 proteins in 1918 species: Archae - 185; Bacteria - 7350; Metazoa - 148; Fungi - 328; Plants - 1302; Viruses - 0; Other Eukaryotes - 921 (source: NCBI BLink). & (gnl|cdd|36561 : 391.0) no description available & (gnl|cdd|30880 : 176.0) no description available & (reliability: 1122.0) & (original description: Putative DTX54, Description = Protein DETOXIFICATION 54, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben044scf00051555ctg007_1-7951' '(at1g61250 : 362.0) Encodes a putative secretory carrier membrane protein (SC3).; secretory carrier 3 (SC3); FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: protein transport; CONTAINS InterPro DOMAIN/s: SCAMP (InterPro:IPR007273); BEST Arabidopsis thaliana protein match is: Secretory carrier membrane protein (SCAMP) family protein (TAIR:AT1G11180.1). & (gnl|cdd|38298 : 309.0) no description available & (gnl|cdd|67747 : 242.0) no description available & (reliability: 724.0) & (original description: Putative SCAMP2, Description = Secretory carrier-associated membrane protein 2, PFAM = PF04144)' T '34.99' 'transport.misc' 'niben044scf00054521ctg002_8465-12025' '(at4g23030 : 506.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: stem, male gametophyte, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G52050.1); Has 11257 Blast hits to 11210 proteins in 2068 species: Archae - 244; Bacteria - 8067; Metazoa - 149; Fungi - 328; Plants - 1302; Viruses - 0; Other Eukaryotes - 1167 (source: NCBI BLink). & (gnl|cdd|36561 : 389.0) no description available & (gnl|cdd|30880 : 179.0) no description available & (reliability: 922.0) & (original description: Putative DTX49, Description = Protein DETOXIFICATION 49, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben044scf00055863ctg001_6836-13031' '(gnl|cdd|35474 : 437.0) no description available & (at3g13050 : 433.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: organic cation/carnitine transporter4 (TAIR:AT3G20660.1); Has 38439 Blast hits to 37687 proteins in 2363 species: Archae - 738; Bacteria - 22281; Metazoa - 5017; Fungi - 6515; Plants - 2234; Viruses - 0; Other Eukaryotes - 1654 (source: NCBI BLink). & (gnl|cdd|84502 : 129.0) no description available & (reliability: 866.0) & (original description: Putative 39356, Description = Organic cation/carnitine transporter 7, PFAM = PF00083)' T '34.99' 'transport.misc' 'niben044scf00061710ctg000_1-5856' '(at1g32050 : 148.0) SCAMP family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SCAMP (InterPro:IPR007273); BEST Arabidopsis thaliana protein match is: secretory carrier 3 (TAIR:AT1G61250.1); Has 679 Blast hits to 677 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 375; Fungi - 14; Plants - 225; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|38298 : 128.0) no description available & (reliability: 296.0) & (original description: Putative Os08g0161750, Description = Os08g0161750 protein, PFAM = PF04144)' T '34.99' 'transport.misc' 'niben101ctg16037_1127-6451' '(at2g21540 : 619.0) SEC14-like 3 (SFH3); FUNCTIONS IN: phosphatidylinositol transporter activity; INVOLVED IN: flower development, transport; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39180.1). & (gnl|cdd|36684 : 263.0) no description available & (gnl|cdd|84928 : 145.0) no description available & (reliability: 1128.0) & (original description: Putative Os05g0545000, Description = Os05g0545000 protein, PFAM = PF00650;PF03765)' T '34.99' 'transport.misc' 'niben101scf00021_17961-23000' '(at1g26690 : 274.0) emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT1G69460.1); Has 1567 Blast hits to 1565 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 472; Plants - 246; Viruses - 0; Other Eukaryotes - 159 (source: NCBI BLink). & (gnl|cdd|36904 : 252.0) no description available & (reliability: 548.0) & (original description: Putative At1g26690, Description = Transmembrane emp24 domain-containing protein p24delta9, PFAM = PF01105)' T '34.99' 'transport.misc' 'niben101scf00080_271027-277157' '(at1g65550 : 630.0) Xanthine/uracil permease family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil/vitamin C permease (TAIR:AT5G25420.1); Has 8520 Blast hits to 8482 proteins in 1844 species: Archae - 65; Bacteria - 6911; Metazoa - 346; Fungi - 119; Plants - 452; Viruses - 1; Other Eukaryotes - 626 (source: NCBI BLink). & (gnl|cdd|36506 : 592.0) no description available & (gnl|cdd|32414 : 168.0) no description available & (reliability: 1260.0) & (original description: Putative NAT10, Description = Putative nucleobase-ascorbate transporter 10, PFAM = PF00860)' T '34.99' 'transport.misc' 'niben101scf00087_162881-173047' '(at3g59280 : 142.0) mutant exhibited resistance to growth on media containing thaxtomin due to a difference in the rate of uptake of the toxin.We proposed that TXR1 is a component of, or regulator of, a dispensable transport mechanism.; THAXTOMIN A RESISTANT 1 (TXR1); INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein Transporter, Pam16 (InterPro:IPR005341); BEST Arabidopsis thaliana protein match is: Protein Transporter, Pam16 (TAIR:AT5G61880.2); Has 398 Blast hits to 398 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 132; Plants - 79; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|38652 : 101.0) no description available & (reliability: 284.0) & (original description: Putative TXR1, Description = AT3g59280/F25L23_140, PFAM = PF03656)' T '34.99' 'transport.misc' 'niben101scf00087_163541-165466' '(at3g59280 : 114.0) mutant exhibited resistance to growth on media containing thaxtomin due to a difference in the rate of uptake of the toxin.We proposed that TXR1 is a component of, or regulator of, a dispensable transport mechanism.; THAXTOMIN A RESISTANT 1 (TXR1); INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein Transporter, Pam16 (InterPro:IPR005341); BEST Arabidopsis thaliana protein match is: Protein Transporter, Pam16 (TAIR:AT5G61880.2); Has 398 Blast hits to 398 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 132; Plants - 79; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative TXR1, Description = Mitochondrial import inner membrane translocase subunit Tim16, PFAM = PF03656)' T '34.99' 'transport.misc' 'niben101scf00159_96913-104732' '(at2g05760 : 889.0) Xanthine/uracil permease family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil permease family protein (TAIR:AT2G34190.1); Has 8976 Blast hits to 8949 proteins in 1902 species: Archae - 67; Bacteria - 7337; Metazoa - 353; Fungi - 128; Plants - 443; Viruses - 1; Other Eukaryotes - 647 (source: NCBI BLink). & (gnl|cdd|36506 : 644.0) no description available & (gnl|cdd|85076 : 176.0) no description available & (reliability: 1778.0) & (original description: Putative NAT1, Description = Nucleobase-ascorbate transporter 1, PFAM = PF00860)' T '34.99' 'transport.misc' 'niben101scf00160_1105760-1110886' '(at2g34250 : 860.0) SecY protein transport family protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: response to salt stress, protein secretion; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SecY protein (InterPro:IPR002208), Translocon Sec61/SecY, plug domain (InterPro:IPR019561); BEST Arabidopsis thaliana protein match is: SecY protein transport family protein (TAIR:AT1G29310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36587 : 760.0) no description available & (gnl|cdd|82683 : 353.0) no description available & (reliability: 1718.0) & (original description: Putative sec61a, Description = Protein transport protein Sec61 subunit alpha, PFAM = PF10559;PF00344)' T '34.99' 'transport.misc' 'niben101scf00202_587425-594392' '(at2g18180 : 644.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: SEC14-like 12 (TAIR:AT4G36490.1); Has 2664 Blast hits to 2639 proteins in 234 species: Archae - 0; Bacteria - 0; Metazoa - 761; Fungi - 594; Plants - 895; Viruses - 1; Other Eukaryotes - 413 (source: NCBI BLink). & (gnl|cdd|36684 : 272.0) no description available & (gnl|cdd|84928 : 145.0) no description available & (reliability: 1202.0) & (original description: Putative SFH12, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH12, PFAM = PF03765;PF00650)' T '34.99' 'transport.misc' 'niben101scf00258_127546-148304' '(at3g52640 : 649.0) Zn-dependent exopeptidases superfamily protein; INVOLVED IN: protein processing; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicastrin (InterPro:IPR008710); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37868 : 246.0) no description available & (gnl|cdd|68999 : 105.0) no description available & (reliability: 1298.0) & (original description: Putative At3g52640, Description = Nicastrin, putative, PFAM = PF05450;PF05450)' T '34.99' 'transport.misc' 'niben101scf00270_1317486-1321962' '(at1g16390 : 535.0) organic cation/carnitine transporter 3 (3-Oct); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: organic cation/carnitine transporter 2 (TAIR:AT1G79360.1); Has 22920 Blast hits to 22877 proteins in 2010 species: Archae - 415; Bacteria - 11427; Metazoa - 4445; Fungi - 4126; Plants - 1629; Viruses - 0; Other Eukaryotes - 878 (source: NCBI BLink). & (gnl|cdd|35476 : 220.0) no description available & (gnl|cdd|84502 : 101.0) no description available & (reliability: 1042.0) & (original description: Putative 37895, Description = Organic cation/carnitine transporter 3, PFAM = PF00083)' T '34.99' 'transport.misc' 'niben101scf00321_437922-444082' '(at3g26590 : 439.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G38030.1); Has 11119 Blast hits to 11024 proteins in 1994 species: Archae - 242; Bacteria - 8025; Metazoa - 141; Fungi - 326; Plants - 1364; Viruses - 0; Other Eukaryotes - 1021 (source: NCBI BLink). & (gnl|cdd|36561 : 395.0) no description available & (gnl|cdd|30880 : 175.0) no description available & (reliability: 878.0) & (original description: Putative DTX29, Description = Protein DETOXIFICATION 29, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf00332_29866-33099' '(at1g19800 : 484.0) Encodes a permease-like protein involved in lipid transfer from the ER to the chloroplast, more specifically, transfer of phosphatidate across the chloroplast inner membrane. Mutant leaves accumulate trigalactosyldiacylglycerol, triacylglycerol and phosphatidate. Chloroplast lipids are altered in their fatty acid composition and as a consequence the development of chloroplasts in the mutants are impacted. The mutant seeds has a higher abortion rate. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.; trigalactosyldiacylglycerol 1 (TGD1); FUNCTIONS IN: lipid transporter activity; INVOLVED IN: lipid transport; LOCATED IN: chloroplast outer membrane, chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF140 (InterPro:IPR003453); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66123 : 210.0) no description available & (reliability: 968.0) & (original description: Putative TGD1, Description = Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic, PFAM = PF02405)' T '34.99' 'transport.misc' 'niben101scf00348_1398975-1405380' '(q9fel7|lax2_medtr : 773.0) Auxin transporter-like protein 2 (AUX1-like protein 2) (MtLAX2) - Medicago truncatula (Barrel medic) & (at2g38120 : 759.0) Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning.; AUXIN RESISTANT 1 (AUX1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUXIN RESISTANT 1 (TAIR:AT5G01240.1); Has 1256 Blast hits to 1251 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 283; Plants - 825; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|36517 : 309.0) no description available & (gnl|cdd|85489 : 224.0) no description available & (reliability: 1518.0) & (original description: Putative LAX4, Description = Auxin transporter-like protein 4, PFAM = PF01490)' T '34.99' 'transport.misc' 'niben101scf00360_365140-369522' '(at3g59280 : 143.0) mutant exhibited resistance to growth on media containing thaxtomin due to a difference in the rate of uptake of the toxin.We proposed that TXR1 is a component of, or regulator of, a dispensable transport mechanism.; THAXTOMIN A RESISTANT 1 (TXR1); INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein Transporter, Pam16 (InterPro:IPR005341); BEST Arabidopsis thaliana protein match is: Protein Transporter, Pam16 (TAIR:AT5G61880.2); Has 398 Blast hits to 398 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 132; Plants - 79; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|38652 : 105.0) no description available & (reliability: 286.0) & (original description: Putative BnaC04g23130D, Description = BnaC04g23130D protein, PFAM = PF03656)' T '34.99' 'transport.misc' 'niben101scf00369_297874-306373' '(at3g62770 : 536.0) Required for autophagosome formation during nutrient deprivation and senescence.; AtATG18a; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: autophagy, leaf senescence, response to starvation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: homolog of yeast autophagy 18 (ATG18) D (TAIR:AT3G56440.1); Has 213 Blast hits to 211 proteins in 57 species: Archae - 0; Bacteria - 30; Metazoa - 48; Fungi - 45; Plants - 63; Viruses - 2; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|37322 : 458.0) no description available & (reliability: 1072.0) & (original description: Putative ATG18A, Description = Autophagy-related protein 18a, PFAM = PF00400)' T '34.99' 'transport.misc' 'niben101scf00381_644059-651045' '(at2g17500 : 526.0) Auxin efflux carrier family protein; FUNCTIONS IN: auxin:hydrogen symporter activity; INVOLVED IN: auxin polar transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT5G65980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37933 : 439.0) no description available & (gnl|cdd|86363 : 183.0) no description available & (reliability: 1052.0) & (original description: Putative PILS5, Description = Protein PIN-LIKES 5, PFAM = PF03547)' T '34.99' 'transport.misc' 'niben101scf00404_123273-133091' '(at1g61250 : 229.0) Encodes a putative secretory carrier membrane protein (SC3).; secretory carrier 3 (SC3); FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: protein transport; CONTAINS InterPro DOMAIN/s: SCAMP (InterPro:IPR007273); BEST Arabidopsis thaliana protein match is: Secretory carrier membrane protein (SCAMP) family protein (TAIR:AT1G11180.1). & (gnl|cdd|38298 : 204.0) no description available & (gnl|cdd|67747 : 183.0) no description available & (reliability: 458.0) & (original description: Putative SC, Description = Secretory carrier-associated membrane protein, PFAM = PF04144)' T '34.99' 'transport.misc' 'niben101scf00504_200549-204506' '(at5g60800 : 112.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G36950.1). & (reliability: 224.0) & (original description: Putative BnaA04g21160D, Description = BnaA04g21160D protein, PFAM = PF00403;PF00403)' T '34.99' 'transport.misc' 'niben101scf00542_439381-458067' '(at3g52640 : 814.0) Zn-dependent exopeptidases superfamily protein; INVOLVED IN: protein processing; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicastrin (InterPro:IPR008710); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37868 : 406.0) no description available & (gnl|cdd|68999 : 207.0) no description available & (reliability: 1628.0) & (original description: Putative At3g52640/At3g52650, Description = Nicastrin, PFAM = PF05450)' T '34.99' 'transport.misc' 'niben101scf00546_27741-31786' '(at1g79710 : 404.0) Major facilitator superfamily protein; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily, general substrate transporter (InterPro:IPR016196), Biopterin transport-related protein BT1 (InterPro:IPR004324); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G25050.1); Has 1010 Blast hits to 995 proteins in 167 species: Archae - 4; Bacteria - 188; Metazoa - 0; Fungi - 6; Plants - 265; Viruses - 0; Other Eukaryotes - 547 (source: NCBI BLink). & (gnl|cdd|66747 : 274.0) no description available & (reliability: 808.0) & (original description: Putative Os05g0376501, Description = Os05g0376501 protein, PFAM = PF03092;PF03092)' T '34.99' 'transport.misc' 'niben101scf00627_342324-345883' '(at4g23030 : 539.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: stem, male gametophyte, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G52050.1); Has 11257 Blast hits to 11210 proteins in 2068 species: Archae - 244; Bacteria - 8067; Metazoa - 149; Fungi - 328; Plants - 1302; Viruses - 0; Other Eukaryotes - 1167 (source: NCBI BLink). & (gnl|cdd|36561 : 393.0) no description available & (gnl|cdd|30880 : 188.0) no description available & (reliability: 978.0) & (original description: Putative DTX49, Description = Protein DETOXIFICATION 49, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf00747_89613-99687' '(at1g17500 : 1878.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, ATP biosynthetic process, phospholipid transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G72700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35427 : 1561.0) no description available & (gnl|cdd|30822 : 361.0) no description available & (reliability: 3756.0) & (original description: Putative ALA4, Description = Probable phospholipid-transporting ATPase 4, PFAM = PF13246;PF16209;PF16212)' T '34.99' 'transport.misc' 'niben101scf00783_631773-637990' '(at5g10190 : 608.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G78130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36544 : 396.0) no description available & (gnl|cdd|87335 : 96.3) no description available & (reliability: 1216.0) & (original description: Putative Sb02g023350, Description = Putative uncharacterized protein Sb02g023350, PFAM = PF07690)' T '34.99' 'transport.misc' 'niben101scf00783_632072-634365' '(at5g10190 : 136.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G78130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36544 : 85.0) no description available & (reliability: 272.0) & (original description: Putative UNE2, Description = Transporter-like protein, PFAM = PF07690)' T '34.99' 'transport.misc' 'niben101scf00839_134522-138081' '(at1g58340 : 429.0) ZF14; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to nematode; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G29140.1); Has 10543 Blast hits to 10463 proteins in 2002 species: Archae - 229; Bacteria - 7598; Metazoa - 148; Fungi - 324; Plants - 1321; Viruses - 0; Other Eukaryotes - 923 (source: NCBI BLink). & (gnl|cdd|36561 : 353.0) no description available & (gnl|cdd|30880 : 176.0) no description available & (reliability: 858.0) & (original description: Putative PGSC0003DMG401015781, Description = Protein DETOXIFICATION, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf00850_102778-109477' '(at1g26690 : 280.0) emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT1G69460.1); Has 1567 Blast hits to 1565 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 472; Plants - 246; Viruses - 0; Other Eukaryotes - 159 (source: NCBI BLink). & (gnl|cdd|36904 : 251.0) no description available & (reliability: 560.0) & (original description: Putative At1g26690, Description = Transmembrane emp24 domain-containing protein p24delta9, PFAM = PF01105)' T '34.99' 'transport.misc' 'niben101scf00864_80094-85290' '(at4g25640 : 563.0) Encodes a multidrug and toxin efflux family transporter. Involved in flavonoid metabolism, affecting Root growth, seed development and germination, and pollen development, release and viability.; detoxifying efflux carrier 35 (DTX35); FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: anther dehiscence, flavonoid metabolic process, pollen development; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G00350.1). & (gnl|cdd|36561 : 380.0) no description available & (gnl|cdd|30880 : 146.0) no description available & (reliability: 1126.0) & (original description: Putative MATE, Description = Protein DETOXIFICATION, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf00864_128266-133179' '(at4g25640 : 546.0) Encodes a multidrug and toxin efflux family transporter. Involved in flavonoid metabolism, affecting Root growth, seed development and germination, and pollen development, release and viability.; detoxifying efflux carrier 35 (DTX35); FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: anther dehiscence, flavonoid metabolic process, pollen development; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G00350.1). & (gnl|cdd|36561 : 395.0) no description available & (gnl|cdd|30880 : 161.0) no description available & (reliability: 1092.0) & (original description: Putative DTX35, Description = Protein DETOXIFICATION 35, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf00893_218665-225641' '(at2g18180 : 638.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: SEC14-like 12 (TAIR:AT4G36490.1); Has 2664 Blast hits to 2639 proteins in 234 species: Archae - 0; Bacteria - 0; Metazoa - 761; Fungi - 594; Plants - 895; Viruses - 1; Other Eukaryotes - 413 (source: NCBI BLink). & (gnl|cdd|36684 : 270.0) no description available & (gnl|cdd|84928 : 146.0) no description available & (reliability: 1200.0) & (original description: Putative SFH3, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH3, PFAM = PF03765;PF00650)' T '34.99' 'transport.misc' 'niben101scf00893_224847-233055' '(at2g21520 : 813.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36684 : 276.0) no description available & (gnl|cdd|84928 : 139.0) no description available & (reliability: 1626.0) & (original description: Putative SFH8, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH8, PFAM = PF03765;PF00650)' T '34.99' 'transport.misc' 'niben101scf00894_87492-91120' '(at4g36790 : 609.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G18590.1); Has 13584 Blast hits to 13542 proteins in 1941 species: Archae - 325; Bacteria - 10929; Metazoa - 520; Fungi - 516; Plants - 316; Viruses - 4; Other Eukaryotes - 974 (source: NCBI BLink). & (gnl|cdd|36544 : 363.0) no description available & (reliability: 1218.0) & (original description: Putative UNE2, Description = Protein spinster, PFAM = PF07690)' T '34.99' 'transport.misc' 'niben101scf00916_152022-156657' '(at5g58070 : 258.0) Encodes a temperature-induced lipocalin TIL1. Involved in thermotolerance. Peripherally associated with plasma membrane.; temperature-induced lipocalin (TIL); FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, response to cold, response to light stimulus, response to heat; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Lipocalin, bacterial (InterPro:IPR002446), Lipocalin, ApoD type (InterPro:IPR022271), Lipocalin-like (InterPro:IPR013208), Lipocalin conserved site (InterPro:IPR022272), Calycin (InterPro:IPR012674), Calycin-like (InterPro:IPR011038); Has 2007 Blast hits to 1991 proteins in 692 species: Archae - 0; Bacteria - 1480; Metazoa - 169; Fungi - 10; Plants - 132; Viruses - 6; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|40021 : 200.0) no description available & (gnl|cdd|87463 : 155.0) no description available & (reliability: 516.0) & (original description: Putative TIL, Description = Temperature-induced lipocalin, PFAM = PF08212)' T '34.99' 'transport.misc' 'niben101scf01101_265614-271484' '(q9fel7|lax2_medtr : 777.0) Auxin transporter-like protein 2 (AUX1-like protein 2) (MtLAX2) - Medicago truncatula (Barrel medic) & (at2g38120 : 756.0) Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning.; AUXIN RESISTANT 1 (AUX1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUXIN RESISTANT 1 (TAIR:AT5G01240.1); Has 1256 Blast hits to 1251 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 283; Plants - 825; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|36517 : 311.0) no description available & (gnl|cdd|85489 : 223.0) no description available & (reliability: 1512.0) & (original description: Putative LAX4, Description = Auxin transporter-like protein 4, PFAM = PF01490)' T '34.99' 'transport.misc' 'niben101scf01139_60605-70276' '(at5g65380 : 639.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, ripening, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G44050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36561 : 439.0) no description available & (gnl|cdd|30880 : 161.0) no description available & (reliability: 1192.0) & (original description: Putative DTX27, Description = Protein DETOXIFICATION 27, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf01180_686966-696254' '(at1g09580 : 233.0) emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT1G57620.1); Has 1762 Blast hits to 1760 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 806; Fungi - 509; Plants - 239; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink). & (gnl|cdd|36904 : 233.0) no description available & (reliability: 466.0) & (original description: Putative At1g09580, Description = Transmembrane emp24 domain-containing protein p24delta3, PFAM = PF01105)' T '34.99' 'transport.misc' 'niben101scf01188_797994-801865' '(at1g16390 : 536.0) organic cation/carnitine transporter 3 (3-Oct); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: organic cation/carnitine transporter 2 (TAIR:AT1G79360.1); Has 22920 Blast hits to 22877 proteins in 2010 species: Archae - 415; Bacteria - 11427; Metazoa - 4445; Fungi - 4126; Plants - 1629; Viruses - 0; Other Eukaryotes - 878 (source: NCBI BLink). & (gnl|cdd|35476 : 208.0) no description available & (gnl|cdd|84502 : 106.0) no description available & (reliability: 1040.0) & (original description: Putative 37895, Description = Organic cation/carnitine transporter 3, PFAM = PF00083)' T '34.99' 'transport.misc' 'niben101scf01192_534027-540497' '(gnl|cdd|38298 : 369.0) no description available & (at1g61250 : 362.0) Encodes a putative secretory carrier membrane protein (SC3).; secretory carrier 3 (SC3); FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: protein transport; CONTAINS InterPro DOMAIN/s: SCAMP (InterPro:IPR007273); BEST Arabidopsis thaliana protein match is: Secretory carrier membrane protein (SCAMP) family protein (TAIR:AT1G11180.1). & (gnl|cdd|67747 : 253.0) no description available & (reliability: 724.0) & (original description: Putative SCAMP2, Description = Secretory carrier-associated membrane protein 2, PFAM = PF04144)' T '34.99' 'transport.misc' 'niben101scf01203_110628-117569' '(at2g34190 : 906.0) Xanthine/uracil permease family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil permease family protein (TAIR:AT2G05760.1); Has 8712 Blast hits to 8692 proteins in 1893 species: Archae - 67; Bacteria - 7003; Metazoa - 354; Fungi - 119; Plants - 444; Viruses - 1; Other Eukaryotes - 724 (source: NCBI BLink). & (gnl|cdd|36506 : 643.0) no description available & (gnl|cdd|85076 : 178.0) no description available & (reliability: 1812.0) & (original description: Putative NAT2, Description = Nucleobase-ascorbate transporter 2, PFAM = PF00860)' T '34.99' 'transport.misc' 'niben101scf01221_1187590-1191605' '(at1g04560 : 198.0) AWPM-19-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like family protein (TAIR:AT5G46530.1); Has 177 Blast hits to 177 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69056 : 153.0) no description available & (reliability: 396.0) & (original description: Putative pm19, Description = AWPM-19-like family protein, PFAM = PF05512)' T '34.99' 'transport.misc' 'niben101scf01221_1723862-1728367' '(at1g04570 : 475.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Biopterin transport-related protein BT1 (InterPro:IPR004324), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G33280.1); Has 816 Blast hits to 814 proteins in 271 species: Archae - 6; Bacteria - 387; Metazoa - 0; Fungi - 18; Plants - 232; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (gnl|cdd|66747 : 290.0) no description available & (reliability: 950.0) & (original description: Putative At2g33280, Description = Probable folate-biopterin transporter 9, chloroplastic, PFAM = PF03092)' T '34.99' 'transport.misc' 'niben101scf01252_544613-550850' '(at5g10190 : 629.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G78130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36544 : 400.0) no description available & (gnl|cdd|87335 : 95.6) no description available & (reliability: 1258.0) & (original description: Putative Os09g0371200, Description = Os09g0371200 protein, PFAM = PF07690)' T '34.99' 'transport.misc' 'niben101scf01320_1-13389' '(at1g79450 : 470.0) ALA-interacting subunit 5 (ALIS5); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid lumen, plasma membrane, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284, transmembrane eukaryotic (InterPro:IPR005045); BEST Arabidopsis thaliana protein match is: LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein (TAIR:AT1G16360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38163 : 377.0) no description available & (gnl|cdd|67019 : 288.0) no description available & (reliability: 884.0) & (original description: Putative ALIS5, Description = ALA-interacting subunit 5, PFAM = PF03381)' T '34.99' 'transport.misc' 'niben101scf01323_510994-530217' '(at3g21690 : 574.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G61890.1); Has 11325 Blast hits to 11232 proteins in 2038 species: Archae - 269; Bacteria - 8227; Metazoa - 142; Fungi - 332; Plants - 1357; Viruses - 0; Other Eukaryotes - 998 (source: NCBI BLink). & (gnl|cdd|36561 : 445.0) no description available & (gnl|cdd|30880 : 176.0) no description available & (reliability: 1148.0) & (original description: Putative DTX40, Description = Protein DETOXIFICATION 40, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf01323_562462-591616' '(at1g61890 : 438.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to karrikin; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G11670.1); Has 9516 Blast hits to 9487 proteins in 1915 species: Archae - 228; Bacteria - 6498; Metazoa - 145; Fungi - 328; Plants - 1371; Viruses - 0; Other Eukaryotes - 946 (source: NCBI BLink). & (gnl|cdd|36561 : 301.0) no description available & (gnl|cdd|30880 : 105.0) no description available & (reliability: 876.0) & (original description: Putative DTX37, Description = Protein DETOXIFICATION 37, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf01329_110375-120629' '(at3g51870 : 495.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, response to nematode; LOCATED IN: mitochondrial inner membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: thylakoid ATP/ADP carrier (TAIR:AT5G01500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35971 : 306.0) no description available & (p29518|bt1_maize : 126.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (gnl|cdd|84566 : 92.3) no description available & (reliability: 990.0) & (original description: Putative EAAC, Description = Probable envelope ADP,ATP carrier protein, chloroplastic, PFAM = PF00153;PF00153;PF00153)' T '34.99' 'transport.misc' 'niben101scf01330_134955-141873' '(at3g62770 : 481.0) Required for autophagosome formation during nutrient deprivation and senescence.; AtATG18a; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: autophagy, leaf senescence, response to starvation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: homolog of yeast autophagy 18 (ATG18) D (TAIR:AT3G56440.1); Has 213 Blast hits to 211 proteins in 57 species: Archae - 0; Bacteria - 30; Metazoa - 48; Fungi - 45; Plants - 63; Viruses - 2; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|37322 : 391.0) no description available & (reliability: 962.0) & (original description: Putative ATG18A, Description = Autophagy-related protein 18a, PFAM = )' T '34.99' 'transport.misc' 'niben101scf01334_77874-81355' '(at1g04560 : 221.0) AWPM-19-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like family protein (TAIR:AT5G46530.1); Has 177 Blast hits to 177 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69056 : 160.0) no description available & (reliability: 442.0) & (original description: Putative GmPM3, Description = PGmPM3, PFAM = PF05512)' T '34.99' 'transport.misc' 'niben101scf01409_310523-319633' '(at5g52450 : 390.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G34360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36561 : 318.0) no description available & (gnl|cdd|30880 : 133.0) no description available & (reliability: 780.0) & (original description: Putative DTX15, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf01413_575027-589569' '(at1g61250 : 384.0) Encodes a putative secretory carrier membrane protein (SC3).; secretory carrier 3 (SC3); FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: protein transport; CONTAINS InterPro DOMAIN/s: SCAMP (InterPro:IPR007273); BEST Arabidopsis thaliana protein match is: Secretory carrier membrane protein (SCAMP) family protein (TAIR:AT1G11180.1). & (gnl|cdd|38298 : 364.0) no description available & (gnl|cdd|67747 : 253.0) no description available & (reliability: 768.0) & (original description: Putative SCAMP1, Description = Secretory carrier-associated membrane protein 1, PFAM = PF04144)' T '34.99' 'transport.misc' 'niben101scf01463_625289-638110' '(at5g62890 : 828.0) Xanthine/uracil permease family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil permease family protein (TAIR:AT5G49990.1); Has 9225 Blast hits to 9208 proteins in 1898 species: Archae - 67; Bacteria - 7527; Metazoa - 347; Fungi - 130; Plants - 454; Viruses - 1; Other Eukaryotes - 699 (source: NCBI BLink). & (gnl|cdd|36506 : 677.0) no description available & (gnl|cdd|85076 : 182.0) no description available & (reliability: 1656.0) & (original description: Putative NAT6, Description = Nucleobase-ascorbate transporter 6, PFAM = PF00860)' T '34.99' 'transport.misc' 'niben101scf01511_285066-288258' '(at5g58070 : 263.0) Encodes a temperature-induced lipocalin TIL1. Involved in thermotolerance. Peripherally associated with plasma membrane.; temperature-induced lipocalin (TIL); FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, response to cold, response to light stimulus, response to heat; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Lipocalin, bacterial (InterPro:IPR002446), Lipocalin, ApoD type (InterPro:IPR022271), Lipocalin-like (InterPro:IPR013208), Lipocalin conserved site (InterPro:IPR022272), Calycin (InterPro:IPR012674), Calycin-like (InterPro:IPR011038); Has 2007 Blast hits to 1991 proteins in 692 species: Archae - 0; Bacteria - 1480; Metazoa - 169; Fungi - 10; Plants - 132; Viruses - 6; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|40021 : 205.0) no description available & (gnl|cdd|87463 : 168.0) no description available & (reliability: 526.0) & (original description: Putative TIL, Description = Temperature-induced lipocalin-1, PFAM = PF08212)' T '34.99' 'transport.misc' 'niben101scf01664_318270-321077' '(at4g38580 : 207.0) putative farnesylated protein (At4g38580) mRNA, complete; farnesylated protein 6 (FP6); FUNCTIONS IN: metal ion binding; INVOLVED IN: heat acclimation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT4G35060.1); Has 1169 Blast hits to 1088 proteins in 38 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative HIPP26, Description = Heavy metal-associated isoprenylated plant protein 26, PFAM = PF00403)' T '34.99' 'transport.misc' 'niben101scf01677_314194-320653' '(at1g20925 : 353.0) Auxin efflux carrier family protein; FUNCTIONS IN: auxin:hydrogen symporter activity; INVOLVED IN: auxin polar transport, transmembrane transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G76520.2); Has 641 Blast hits to 607 proteins in 137 species: Archae - 6; Bacteria - 69; Metazoa - 0; Fungi - 180; Plants - 327; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|37933 : 344.0) no description available & (gnl|cdd|86363 : 145.0) no description available & (reliability: 696.0) & (original description: Putative PILS3, Description = Protein PIN-LIKES 3, PFAM = PF03547)' T '34.99' 'transport.misc' 'niben101scf01779_334351-342209' '(at3g62770 : 469.0) Required for autophagosome formation during nutrient deprivation and senescence.; AtATG18a; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: autophagy, leaf senescence, response to starvation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: homolog of yeast autophagy 18 (ATG18) D (TAIR:AT3G56440.1); Has 213 Blast hits to 211 proteins in 57 species: Archae - 0; Bacteria - 30; Metazoa - 48; Fungi - 45; Plants - 63; Viruses - 2; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|37322 : 411.0) no description available & (reliability: 938.0) & (original description: Putative ATG18A, Description = Autophagy-related protein 18a, PFAM = )' T '34.99' 'transport.misc' 'niben101scf01826_306079-309781' '(at5g50300 : 577.0) Encodes a homolog of the adenine-guanine-hypoxanthine transporter AzgA of Aspergillus nidulans. Function as a plant adenine-guanine transporter. Two closely related genes exist in Arabidopsis: AT3G10960 (Azg1) and AT5G50300 (Azg2).; AZA-GUANINE RESISTANT2 (AZG2); FUNCTIONS IN: transporter activity, purine transmembrane transporter activity; INVOLVED IN: transport, purine transport; LOCATED IN: membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: AZA-guanine resistant1 (TAIR:AT3G10960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|32433 : 288.0) no description available & (reliability: 1154.0) & (original description: Putative AZG2, Description = Adenine/guanine permease AZG2, PFAM = PF00860)' T '34.99' 'transport.misc' 'niben101scf01897_545654-553541' '(at2g38330 : 484.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G38380.1); Has 17219 Blast hits to 17166 proteins in 2310 species: Archae - 394; Bacteria - 13798; Metazoa - 83; Fungi - 156; Plants - 607; Viruses - 0; Other Eukaryotes - 2181 (source: NCBI BLink). & (gnl|cdd|30880 : 176.0) no description available & (gnl|cdd|36561 : 154.0) no description available & (reliability: 968.0) & (original description: Putative mate2, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf01965_7799-44336' '(at5g13750 : 562.0) zinc induced facilitator-like 1 (ZIFL1); FUNCTIONS IN: tetracycline:hydrogen antiporter activity; INVOLVED IN: response to karrikin; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Tetracycline resistance protein, TetA (InterPro:IPR001958), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: zinc induced facilitator 1 (TAIR:AT5G13740.1); Has 18147 Blast hits to 17729 proteins in 2581 species: Archae - 337; Bacteria - 13496; Metazoa - 505; Fungi - 2137; Plants - 360; Viruses - 0; Other Eukaryotes - 1312 (source: NCBI BLink). & (gnl|cdd|37826 : 369.0) no description available & (reliability: 1124.0) & (original description: Putative ZIFL1, Description = Protein ZINC INDUCED FACILITATOR-LIKE 1, PFAM = PF07690)' T '34.99' 'transport.misc' 'niben101scf01978_26465-33886' '(at1g51340 : 487.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT3G08040.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30880 : 150.0) no description available & (gnl|cdd|36561 : 139.0) no description available & (reliability: 974.0) & (original description: Putative NtMATE, Description = Protein DETOXIFICATION, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf01980_710510-716309' '(at1g78130 : 607.0) unfertilized embryo sac 2 (UNE2); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G10190.1); Has 16910 Blast hits to 16851 proteins in 2099 species: Archae - 450; Bacteria - 14339; Metazoa - 386; Fungi - 319; Plants - 340; Viruses - 3; Other Eukaryotes - 1073 (source: NCBI BLink). & (gnl|cdd|36544 : 390.0) no description available & (gnl|cdd|87335 : 83.3) no description available & (reliability: 1166.0) & (original description: Putative BnaA02g18770D, Description = BnaA02g18770D protein, PFAM = PF07690)' T '34.99' 'transport.misc' 'niben101scf02085_2316672-2324414' '(at2g38330 : 412.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G38380.1); Has 17219 Blast hits to 17166 proteins in 2310 species: Archae - 394; Bacteria - 13798; Metazoa - 83; Fungi - 156; Plants - 607; Viruses - 0; Other Eukaryotes - 2181 (source: NCBI BLink). & (gnl|cdd|30880 : 163.0) no description available & (gnl|cdd|36561 : 142.0) no description available & (reliability: 824.0) & (original description: Putative mate2, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf02139_552424-556587' '(at5g60800 : 109.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G36950.1). & (reliability: 218.0) & (original description: Putative HIPP3, Description = Heavy metal transport/detoxification superfamily protein, PFAM = PF00403;PF00403)' T '34.99' 'transport.misc' 'niben101scf02237_281288-295596' '(at5g62890 : 818.0) Xanthine/uracil permease family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil permease family protein (TAIR:AT5G49990.1); Has 9225 Blast hits to 9208 proteins in 1898 species: Archae - 67; Bacteria - 7527; Metazoa - 347; Fungi - 130; Plants - 454; Viruses - 1; Other Eukaryotes - 699 (source: NCBI BLink). & (gnl|cdd|36506 : 682.0) no description available & (gnl|cdd|85076 : 182.0) no description available & (reliability: 1636.0) & (original description: Putative NAT6, Description = Nucleobase-ascorbate transporter 6, PFAM = PF00860)' T '34.99' 'transport.misc' 'niben101scf02262_254672-272067' '(at5g54750 : 338.0) Transport protein particle (TRAPP) component; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ER to Golgi vesicle-mediated transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transport protein particle (TRAPP) component (InterPro:IPR007194), TRAPP I complex, Bet3 (InterPro:IPR016721). & (gnl|cdd|38540 : 279.0) no description available & (gnl|cdd|86520 : 168.0) no description available & (reliability: 676.0) & (original description: Putative trappc3, Description = Trafficking protein particle complex subunit 3, PFAM = PF04051)' T '34.99' 'transport.misc' 'niben101scf02269_393377-401777' '(q9fel7|lax2_medtr : 826.0) Auxin transporter-like protein 2 (AUX1-like protein 2) (MtLAX2) - Medicago truncatula (Barrel medic) & (at2g38120 : 798.0) Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning.; AUXIN RESISTANT 1 (AUX1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUXIN RESISTANT 1 (TAIR:AT5G01240.1); Has 1256 Blast hits to 1251 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 283; Plants - 825; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|36517 : 309.0) no description available & (gnl|cdd|85489 : 225.0) no description available & (reliability: 1596.0) & (original description: Putative LAX2, Description = Auxin transporter-like protein 2, PFAM = PF01490)' T '34.99' 'transport.misc' 'niben101scf02330_97688-100492' '(at5g18970 : 163.0) AWPM-19-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like family protein (TAIR:AT5G46530.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|69056 : 155.0) no description available & (reliability: 326.0) & (original description: Putative lea, Description = AWPM-19-like membrane family protein, PFAM = PF05512)' T '34.99' 'transport.misc' 'niben101scf02461_430580-442751' '(at3g12740 : 526.0) Physically interacts with ALA3, and is required for the phospholipid translocase activity of ALA3.; ALA-interacting subunit 1 (ALIS1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284, transmembrane eukaryotic (InterPro:IPR005045); BEST Arabidopsis thaliana protein match is: LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein (TAIR:AT1G54320.1); Has 864 Blast hits to 864 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 234; Plants - 160; Viruses - 0; Other Eukaryotes - 218 (source: NCBI BLink). & (gnl|cdd|38163 : 419.0) no description available & (gnl|cdd|67019 : 305.0) no description available & (reliability: 1014.0) & (original description: Putative ALIS1, Description = ALA-interacting subunit 1, PFAM = PF03381)' T '34.99' 'transport.misc' 'niben101scf02463_140723-149225' '(at3g15380 : 1091.0) Plasma-membrane choline transporter family protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF580 (InterPro:IPR007603); Has 948 Blast hits to 937 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 503; Fungi - 120; Plants - 118; Viruses - 0; Other Eukaryotes - 207 (source: NCBI BLink). & (gnl|cdd|36576 : 356.0) no description available & (gnl|cdd|68100 : 299.0) no description available & (reliability: 2182.0) & (original description: Putative At3g15380, Description = Plasma-membrane choline transporter family protein, PFAM = PF04515)' T '34.99' 'transport.misc' 'niben101scf02483_59323-73220' '(at1g26690 : 271.0) emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT1G69460.1); Has 1567 Blast hits to 1565 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 472; Plants - 246; Viruses - 0; Other Eukaryotes - 159 (source: NCBI BLink). & (gnl|cdd|36904 : 238.0) no description available & (reliability: 542.0) & (original description: Putative At1g26690, Description = Transmembrane emp24 domain-containing protein p24delta9, PFAM = PF01105)' T '34.99' 'transport.misc' 'niben101scf02509_36895-42785' '(at3g08040 : 543.0) Encodes a member of the MATE (multidrug and toxin efflux family), expressed in roots but not shoots. Mutants accumulate excess iron, manganese and zinc, and express root Fe(III) chelatase activity even under iron sufficiency conditions. FRD3 is likely to function in root xylem loading of an iron chelator or other factor necessary for efficient iron uptake out of the xylem or apoplastic space and into leaf cells.; FERRIC REDUCTASE DEFECTIVE 3 (FRD3); CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G51340.2); Has 16442 Blast hits to 16241 proteins in 2243 species: Archae - 390; Bacteria - 12800; Metazoa - 108; Fungi - 151; Plants - 401; Viruses - 0; Other Eukaryotes - 2592 (source: NCBI BLink). & (gnl|cdd|30880 : 155.0) no description available & (gnl|cdd|36561 : 151.0) no description available & (reliability: 1060.0) & (original description: Putative DTX42, Description = Protein DETOXIFICATION 42, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf02538_22604-27172' '(at2g04040 : 414.0) AtDTX1 (At2g04040) has been identified as a detoxifying efflux carrier for plant-derived antibiotics and other toxic compounds, including CD2+.; TX1; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G04080.1); Has 9657 Blast hits to 9581 proteins in 1940 species: Archae - 182; Bacteria - 6693; Metazoa - 146; Fungi - 326; Plants - 1322; Viruses - 0; Other Eukaryotes - 988 (source: NCBI BLink). & (gnl|cdd|36561 : 390.0) no description available & (gnl|cdd|30880 : 160.0) no description available & (reliability: 828.0) & (original description: Putative DTX1, Description = Protein DETOXIFICATION 1, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf02538_437470-515525' '(at2g04090 : 120.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G04100.1); Has 9714 Blast hits to 9643 proteins in 1968 species: Archae - 172; Bacteria - 6792; Metazoa - 143; Fungi - 326; Plants - 1316; Viruses - 0; Other Eukaryotes - 965 (source: NCBI BLink). & (gnl|cdd|36561 : 90.8) no description available & (reliability: 240.0) & (original description: Putative PGSC0003DMG400030630, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554)' T '34.99' 'transport.misc' 'niben101scf02538_551059-560158' '(at1g71140 : 471.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G15150.1); Has 10143 Blast hits to 10059 proteins in 1990 species: Archae - 227; Bacteria - 7201; Metazoa - 146; Fungi - 330; Plants - 1347; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink). & (gnl|cdd|36561 : 416.0) no description available & (gnl|cdd|30880 : 176.0) no description available & (reliability: 942.0) & (original description: Putative DTX2, Description = Protein DETOXIFICATION 2, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf02543_485357-492971' '(at3g21690 : 632.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G61890.1); Has 11325 Blast hits to 11232 proteins in 2038 species: Archae - 269; Bacteria - 8227; Metazoa - 142; Fungi - 332; Plants - 1357; Viruses - 0; Other Eukaryotes - 998 (source: NCBI BLink). & (gnl|cdd|36561 : 434.0) no description available & (gnl|cdd|30880 : 175.0) no description available & (reliability: 1264.0) & (original description: Putative DTX40, Description = Protein DETOXIFICATION 40, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf02665_1322984-1325823' '(at5g01990 : 186.0) Auxin efflux carrier family protein; FUNCTIONS IN: auxin:hydrogen symporter activity; INVOLVED IN: auxin polar transport, transmembrane transport; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G71090.1); Has 514 Blast hits to 486 proteins in 113 species: Archae - 2; Bacteria - 6; Metazoa - 0; Fungi - 225; Plants - 217; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|37933 : 124.0) no description available & (reliability: 372.0) & (original description: Putative PINY, Description = Auxin efflux carrier family protein, PFAM = PF03547)' T '34.99' 'transport.misc' 'niben101scf02733_71099-77500' '(gnl|cdd|38298 : 370.0) no description available & (at1g61250 : 365.0) Encodes a putative secretory carrier membrane protein (SC3).; secretory carrier 3 (SC3); FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: protein transport; CONTAINS InterPro DOMAIN/s: SCAMP (InterPro:IPR007273); BEST Arabidopsis thaliana protein match is: Secretory carrier membrane protein (SCAMP) family protein (TAIR:AT1G11180.1). & (gnl|cdd|67747 : 255.0) no description available & (reliability: 730.0) & (original description: Putative SCAMP3, Description = Secretory carrier-associated membrane protein 3, PFAM = PF04144)' T '34.99' 'transport.misc' 'niben101scf02828_364698-368053' '(at1g71090 : 546.0) Auxin efflux carrier family protein; FUNCTIONS IN: auxin:hydrogen symporter activity; INVOLVED IN: auxin polar transport, transmembrane transport; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT5G01990.1); Has 749 Blast hits to 638 proteins in 173 species: Archae - 11; Bacteria - 75; Metazoa - 0; Fungi - 346; Plants - 230; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|37933 : 387.0) no description available & (gnl|cdd|86363 : 118.0) no description available & (reliability: 1092.0) & (original description: Putative PILS2, Description = Protein PIN-LIKES 2, PFAM = PF03547)' T '34.99' 'transport.misc' 'niben101scf02831_347163-354619' '(at1g17500 : 1812.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, ATP biosynthetic process, phospholipid transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G72700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35427 : 1523.0) no description available & (gnl|cdd|30822 : 281.0) no description available & (reliability: 3624.0) & (original description: Putative ALA4, Description = Probable phospholipid-transporting ATPase 4, PFAM = PF16209;PF13246;PF16212)' T '34.99' 'transport.misc' 'niben101scf02836_27407-32796' '(at3g13050 : 414.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: organic cation/carnitine transporter4 (TAIR:AT3G20660.1); Has 38439 Blast hits to 37687 proteins in 2363 species: Archae - 738; Bacteria - 22281; Metazoa - 5017; Fungi - 6515; Plants - 2234; Viruses - 0; Other Eukaryotes - 1654 (source: NCBI BLink). & (gnl|cdd|35474 : 409.0) no description available & (gnl|cdd|84502 : 121.0) no description available & (reliability: 828.0) & (original description: Putative 39356, Description = Organic cation/carnitine transporter 7, PFAM = PF00083)' T '34.99' 'transport.misc' 'niben101scf02997_41093-48208' '(at3g13900 : 1835.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: ATP biosynthetic process, phospholipid transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G54280.1); Has 2989 Blast hits to 2738 proteins in 536 species: Archae - 31; Bacteria - 1088; Metazoa - 612; Fungi - 467; Plants - 304; Viruses - 0; Other Eukaryotes - 487 (source: NCBI BLink). & (gnl|cdd|35427 : 1550.0) no description available & (gnl|cdd|30822 : 291.0) no description available & (reliability: 3662.0) & (original description: Putative ALA7, Description = Probable phospholipid-transporting ATPase 7, PFAM = PF16212;PF16209;PF13246)' T '34.99' 'transport.misc' 'niben101scf03005_399650-405292' '(at3g08040 : 544.0) Encodes a member of the MATE (multidrug and toxin efflux family), expressed in roots but not shoots. Mutants accumulate excess iron, manganese and zinc, and express root Fe(III) chelatase activity even under iron sufficiency conditions. FRD3 is likely to function in root xylem loading of an iron chelator or other factor necessary for efficient iron uptake out of the xylem or apoplastic space and into leaf cells.; FERRIC REDUCTASE DEFECTIVE 3 (FRD3); CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G51340.2); Has 16442 Blast hits to 16241 proteins in 2243 species: Archae - 390; Bacteria - 12800; Metazoa - 108; Fungi - 151; Plants - 401; Viruses - 0; Other Eukaryotes - 2592 (source: NCBI BLink). & (gnl|cdd|30880 : 156.0) no description available & (gnl|cdd|36561 : 150.0) no description available & (reliability: 1056.0) & (original description: Putative DTX43, Description = Protein DETOXIFICATION 43, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf03031_416756-432846' '(at2g32040 : 597.0) The At2g32040 gene product has been demonstrated to mediate folate monoglutamate transport involved in tetrahydrofolate biosynthesis. It also mediates transport of antifolates, such as methotrexate and aminopterin. The gene is expressed in both chloroplast and non-green plastids.; Major facilitator superfamily protein; FUNCTIONS IN: folic acid transporter activity, 5-formyltetrahydrofolate transporter activity, transporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily, general substrate transporter (InterPro:IPR016196), Biopterin transport-related protein BT1 (InterPro:IPR004324); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G25050.1); Has 2017 Blast hits to 1915 proteins in 421 species: Archae - 4; Bacteria - 671; Metazoa - 3; Fungi - 33; Plants - 272; Viruses - 0; Other Eukaryotes - 1034 (source: NCBI BLink). & (gnl|cdd|66747 : 394.0) no description available & (reliability: 1194.0) & (original description: Putative fbt, Description = Folate/biopterin transporter, PFAM = PF03092;PF03092)' T '34.99' 'transport.misc' 'niben101scf03045_253142-259837' '(at3g21690 : 617.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G61890.1); Has 11325 Blast hits to 11232 proteins in 2038 species: Archae - 269; Bacteria - 8227; Metazoa - 142; Fungi - 332; Plants - 1357; Viruses - 0; Other Eukaryotes - 998 (source: NCBI BLink). & (gnl|cdd|36561 : 419.0) no description available & (gnl|cdd|30880 : 161.0) no description available & (reliability: 1234.0) & (original description: Putative DTX36, Description = Protein DETOXIFICATION 36, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf03114_1016399-1023997' '(at4g25640 : 580.0) Encodes a multidrug and toxin efflux family transporter. Involved in flavonoid metabolism, affecting Root growth, seed development and germination, and pollen development, release and viability.; detoxifying efflux carrier 35 (DTX35); FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: anther dehiscence, flavonoid metabolic process, pollen development; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G00350.1). & (gnl|cdd|36561 : 382.0) no description available & (gnl|cdd|30880 : 152.0) no description available & (reliability: 1160.0) & (original description: Putative DTX35, Description = Protein DETOXIFICATION 35, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf03114_1016822-1023982' '(at4g25640 : 540.0) Encodes a multidrug and toxin efflux family transporter. Involved in flavonoid metabolism, affecting Root growth, seed development and germination, and pollen development, release and viability.; detoxifying efflux carrier 35 (DTX35); FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: anther dehiscence, flavonoid metabolic process, pollen development; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G00350.1). & (gnl|cdd|36561 : 352.0) no description available & (gnl|cdd|30880 : 138.0) no description available & (reliability: 1080.0) & (original description: Putative FFT, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf03241_176260-183941' '(at4g38050 : 794.0) Xanthine/uracil permease family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: nucleobase-ascorbate transporter 12 (TAIR:AT2G27810.1); Has 9537 Blast hits to 9467 proteins in 1922 species: Archae - 69; Bacteria - 7876; Metazoa - 365; Fungi - 138; Plants - 431; Viruses - 1; Other Eukaryotes - 657 (source: NCBI BLink). & (gnl|cdd|36506 : 560.0) no description available & (gnl|cdd|85076 : 195.0) no description available & (reliability: 1588.0) & (original description: Putative NAT11, Description = Nucleobase-ascorbate transporter 11, PFAM = PF00860)' T '34.99' 'transport.misc' 'niben101scf03255_348662-421184' '(at5g58030 : 341.0) Transport protein particle (TRAPP) component; CONTAINS InterPro DOMAIN/s: Transport protein particle (TRAPP) component (InterPro:IPR007194), TRAPP I complex, Trs31 (InterPro:IPR016696); Has 560 Blast hits to 545 proteins in 219 species: Archae - 0; Bacteria - 0; Metazoa - 199; Fungi - 199; Plants - 63; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (gnl|cdd|38525 : 252.0) no description available & (gnl|cdd|34729 : 169.0) no description available & (reliability: 682.0) & (original description: Putative trs31, Description = Trafficking protein particle complex subunit 5, PFAM = PF04051)' T '34.99' 'transport.misc' 'niben101scf03332_11583-16993' '(at1g33110 : 580.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G33100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36561 : 433.0) no description available & (gnl|cdd|30880 : 159.0) no description available & (reliability: 1160.0) & (original description: Putative DTX21, Description = Protein DETOXIFICATION 21, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf03338_53888-57827' '(at1g58340 : 612.0) ZF14; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to nematode; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G29140.1); Has 10543 Blast hits to 10463 proteins in 2002 species: Archae - 229; Bacteria - 7598; Metazoa - 148; Fungi - 324; Plants - 1321; Viruses - 0; Other Eukaryotes - 923 (source: NCBI BLink). & (gnl|cdd|36561 : 396.0) no description available & (gnl|cdd|30880 : 185.0) no description available & (reliability: 1224.0) & (original description: Putative DTX48, Description = Protein DETOXIFICATION 48, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf03340_4835-10884' '(at1g71870 : 564.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G29140.1); Has 10234 Blast hits to 10086 proteins in 1918 species: Archae - 185; Bacteria - 7350; Metazoa - 148; Fungi - 328; Plants - 1302; Viruses - 0; Other Eukaryotes - 921 (source: NCBI BLink). & (gnl|cdd|36561 : 392.0) no description available & (gnl|cdd|30880 : 179.0) no description available & (reliability: 1128.0) & (original description: Putative DTX54, Description = Protein DETOXIFICATION 54, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf03392_865569-871541' '(at3g26590 : 525.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G38030.1); Has 11119 Blast hits to 11024 proteins in 1994 species: Archae - 242; Bacteria - 8025; Metazoa - 141; Fungi - 326; Plants - 1364; Viruses - 0; Other Eukaryotes - 1021 (source: NCBI BLink). & (gnl|cdd|36561 : 437.0) no description available & (gnl|cdd|30880 : 167.0) no description available & (reliability: 1050.0) & (original description: Putative FFT, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf03407_60556-75957' '(at3g23550 : 486.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT3G23560.1); Has 11241 Blast hits to 11165 proteins in 2062 species: Archae - 263; Bacteria - 7905; Metazoa - 148; Fungi - 330; Plants - 1322; Viruses - 0; Other Eukaryotes - 1273 (source: NCBI BLink). & (gnl|cdd|36561 : 360.0) no description available & (gnl|cdd|30880 : 173.0) no description available & (reliability: 972.0) & (original description: Putative ALF5, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf03407_91315-96849' '(at3g23550 : 483.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT3G23560.1); Has 11241 Blast hits to 11165 proteins in 2062 species: Archae - 263; Bacteria - 7905; Metazoa - 148; Fungi - 330; Plants - 1322; Viruses - 0; Other Eukaryotes - 1273 (source: NCBI BLink). & (gnl|cdd|36561 : 358.0) no description available & (gnl|cdd|30880 : 171.0) no description available & (reliability: 966.0) & (original description: Putative DTX18, Description = Protein DETOXIFICATION 18, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf03434_96745-103866' '(at1g60030 : 595.0) nucleobase-ascorbate transporter 7 (NAT7); FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: nucleobase-ascorbate transporter 8 (TAIR:AT1G10540.1); Has 9221 Blast hits to 9205 proteins in 1877 species: Archae - 67; Bacteria - 7547; Metazoa - 349; Fungi - 126; Plants - 456; Viruses - 1; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|36506 : 595.0) no description available & (gnl|cdd|85076 : 175.0) no description available & (reliability: 1190.0) & (original description: Putative LPE1, Description = Nucleobase-ascorbate transporter-like protein, PFAM = PF00860)' T '34.99' 'transport.misc' 'niben101scf03507_304027-308987' '(at3g21690 : 566.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G61890.1); Has 11325 Blast hits to 11232 proteins in 2038 species: Archae - 269; Bacteria - 8227; Metazoa - 142; Fungi - 332; Plants - 1357; Viruses - 0; Other Eukaryotes - 998 (source: NCBI BLink). & (gnl|cdd|36561 : 427.0) no description available & (gnl|cdd|30880 : 172.0) no description available & (reliability: 1132.0) & (original description: Putative DTX40, Description = Protein DETOXIFICATION 40, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf03576_88765-92782' '(at1g64890 : 436.0) Major facilitator superfamily protein; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily, general substrate transporter (InterPro:IPR016196), Biopterin transport-related protein BT1 (InterPro:IPR004324); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G04570.1); Has 1088 Blast hits to 1079 proteins in 365 species: Archae - 17; Bacteria - 560; Metazoa - 42; Fungi - 5; Plants - 247; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|66747 : 301.0) no description available & (reliability: 872.0) & (original description: Putative At1g64890, Description = Probable folate-biopterin transporter 7, PFAM = PF03092;PF03092)' T '34.99' 'transport.misc' 'niben101scf03673_157741-165193' '(at2g17500 : 474.0) Auxin efflux carrier family protein; FUNCTIONS IN: auxin:hydrogen symporter activity; INVOLVED IN: auxin polar transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT5G65980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37933 : 440.0) no description available & (gnl|cdd|86363 : 118.0) no description available & (reliability: 948.0) & (original description: Putative PILS5, Description = Protein PIN-LIKES 5, PFAM = PF03547)' T '34.99' 'transport.misc' 'niben101scf03804_976070-989107' '(at1g09580 : 264.0) emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT1G57620.1); Has 1762 Blast hits to 1760 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 806; Fungi - 509; Plants - 239; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink). & (gnl|cdd|36904 : 258.0) no description available & (reliability: 528.0) & (original description: Putative CYB, Description = Transmembrane emp24 domain-containing protein 10, PFAM = PF01105)' T '34.99' 'transport.misc' 'niben101scf03872_230494-234039' '(at5g60800 : 128.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G36950.1). & (reliability: 256.0) & (original description: Putative A15, Description = Heavy metal transport/detoxification superfamily protein, putative, PFAM = PF00403;PF00403)' T '34.99' 'transport.misc' 'niben101scf03872_230497-235555' '(at5g60800 : 128.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G36950.1). & (reliability: 256.0) & (original description: Putative A15, Description = Heavy metal transport/detoxification superfamily protein, putative, PFAM = PF00403;PF00403)' T '34.99' 'transport.misc' 'niben101scf03904_27084-36084' '(at1g09580 : 271.0) emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT1G57620.1); Has 1762 Blast hits to 1760 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 806; Fungi - 509; Plants - 239; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink). & (gnl|cdd|36904 : 265.0) no description available & (reliability: 542.0) & (original description: Putative At1g09580, Description = Transmembrane emp24 domain-containing protein p24delta3, PFAM = PF01105)' T '34.99' 'transport.misc' 'niben101scf03937_378626-385716' '(at1g09580 : 265.0) emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT1G57620.1); Has 1762 Blast hits to 1760 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 806; Fungi - 509; Plants - 239; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink). & (gnl|cdd|36904 : 263.0) no description available & (reliability: 530.0) & (original description: Putative CYB, Description = Transmembrane emp24 domain-containing protein 10, PFAM = PF01105)' T '34.99' 'transport.misc' 'niben101scf03939_217068-226070' '(at5g62890 : 853.0) Xanthine/uracil permease family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil permease family protein (TAIR:AT5G49990.1); Has 9225 Blast hits to 9208 proteins in 1898 species: Archae - 67; Bacteria - 7527; Metazoa - 347; Fungi - 130; Plants - 454; Viruses - 1; Other Eukaryotes - 699 (source: NCBI BLink). & (gnl|cdd|36506 : 683.0) no description available & (gnl|cdd|85076 : 189.0) no description available & (reliability: 1706.0) & (original description: Putative NAT6, Description = Nucleobase-ascorbate transporter 6, PFAM = PF00860)' T '34.99' 'transport.misc' 'niben101scf03953_331909-336572' '(at1g47530 : 441.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, ripening, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: root hair specific 2 (TAIR:AT1G12950.1); Has 9964 Blast hits to 9893 proteins in 2013 species: Archae - 182; Bacteria - 7111; Metazoa - 140; Fungi - 326; Plants - 1355; Viruses - 0; Other Eukaryotes - 850 (source: NCBI BLink). & (gnl|cdd|36561 : 419.0) no description available & (gnl|cdd|30880 : 189.0) no description available & (reliability: 870.0) & (original description: Putative Sb03g035610, Description = Protein DETOXIFICATION, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf03969_574026-581027' '(at1g72700 : 1475.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, ATP biosynthetic process, phospholipid transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G17500.1); Has 13795 Blast hits to 12389 proteins in 1682 species: Archae - 129; Bacteria - 4365; Metazoa - 3646; Fungi - 2158; Plants - 963; Viruses - 3; Other Eukaryotes - 2531 (source: NCBI BLink). & (gnl|cdd|35427 : 850.0) no description available & (gnl|cdd|30822 : 283.0) no description available & (reliability: 2914.0) & (original description: Putative ALA5, Description = Probable phospholipid-transporting ATPase 5, PFAM = PF13246;PF00122;PF16209;PF16212)' T '34.99' 'transport.misc' 'niben101scf04024_233885-240924' '(at1g71140 : 473.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G15150.1); Has 10143 Blast hits to 10059 proteins in 1990 species: Archae - 227; Bacteria - 7201; Metazoa - 146; Fungi - 330; Plants - 1347; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink). & (gnl|cdd|36561 : 437.0) no description available & (gnl|cdd|30880 : 164.0) no description available & (reliability: 946.0) & (original description: Putative DTX14, Description = Protein DETOXIFICATION 14, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf04098_18566-22906' '(at5g54750 : 332.0) Transport protein particle (TRAPP) component; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ER to Golgi vesicle-mediated transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transport protein particle (TRAPP) component (InterPro:IPR007194), TRAPP I complex, Bet3 (InterPro:IPR016721). & (gnl|cdd|38540 : 271.0) no description available & (gnl|cdd|86520 : 162.0) no description available & (reliability: 664.0) & (original description: Putative bet3, Description = Trafficking protein particle complex subunit 3, PFAM = PF04051)' T '34.99' 'transport.misc' 'niben101scf04212_101969-109248' '(at4g38640 : 594.0) Plasma-membrane choline transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF580 (InterPro:IPR007603); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36576 : 207.0) no description available & (gnl|cdd|68100 : 169.0) no description available & (reliability: 1188.0) & (original description: Putative BnaC03g60100D, Description = BnaC03g60100D protein, PFAM = PF04515)' T '34.99' 'transport.misc' 'niben101scf04233_60305-63341' '(at1g29520 : 205.0) AWPM-19-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like family protein (TAIR:AT5G46530.1); Has 177 Blast hits to 177 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69056 : 190.0) no description available & (reliability: 410.0) & (original description: Putative lea, Description = AWPM-19-like family protein, PFAM = PF05512)' T '34.99' 'transport.misc' 'niben101scf04455_415968-420883' '(at5g65380 : 453.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, ripening, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G44050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36561 : 371.0) no description available & (gnl|cdd|30880 : 155.0) no description available & (reliability: 862.0) & (original description: Putative DTX27, Description = Protein DETOXIFICATION 27, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf04505_308246-312822' '(at1g33110 : 592.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G33100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36561 : 424.0) no description available & (gnl|cdd|30880 : 161.0) no description available & (reliability: 1184.0) & (original description: Putative PGSC0003DMG400023681, Description = Protein DETOXIFICATION, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf04523_1-3262' '(at5g49130 : 544.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G71870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36561 : 337.0) no description available & (gnl|cdd|30880 : 155.0) no description available & (reliability: 1088.0) & (original description: Putative DTX55, Description = Protein DETOXIFICATION 55, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf04549_39300-43545' '(at5g60800 : 122.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G36950.1). & (reliability: 244.0) & (original description: Putative HIPP3, Description = Heavy metal-associated isoprenylated plant protein 3, PFAM = PF00403;PF00403)' T '34.99' 'transport.misc' 'niben101scf04570_414095-419074' '(at1g71140 : 496.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G15150.1); Has 10143 Blast hits to 10059 proteins in 1990 species: Archae - 227; Bacteria - 7201; Metazoa - 146; Fungi - 330; Plants - 1347; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink). & (gnl|cdd|36561 : 435.0) no description available & (gnl|cdd|30880 : 174.0) no description available & (reliability: 992.0) & (original description: Putative DTX14, Description = Protein DETOXIFICATION 14, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf04608_149925-153796' '(at5g04780 : 712.0) Pentatricopeptide repeat (PPR) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G02750.1); Has 38256 Blast hits to 13510 proteins in 241 species: Archae - 0; Bacteria - 13; Metazoa - 59; Fungi - 56; Plants - 37619; Viruses - 0; Other Eukaryotes - 509 (source: NCBI BLink). & (q76c99|rf1_orysa : 87.8) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1424.0) & (original description: Putative MEF1, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF13041;PF13041;PF13041;PF12854;PF14432)' T '34.99' 'transport.misc' 'niben101scf04820_234593-240227' '(o24381|tlc1_soltu : 978.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (at1g80300 : 843.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (gnl|cdd|66864 : 649.0) no description available & (reliability: 1686.0) & (original description: Putative npt, Description = ADP,ATP carrier protein 1, PFAM = PF03219)' T '34.99' 'transport.misc' 'niben101scf04870_92337-106878' '(at1g12950 : 627.0) root hair specific 2 (RSH2); FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: sperm cell, root hair, root; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT3G26590.1); Has 9730 Blast hits to 9684 proteins in 1960 species: Archae - 180; Bacteria - 6829; Metazoa - 143; Fungi - 326; Plants - 1351; Viruses - 0; Other Eukaryotes - 901 (source: NCBI BLink). & (gnl|cdd|36561 : 446.0) no description available & (gnl|cdd|30880 : 175.0) no description available & (reliability: 1254.0) & (original description: Putative DTX31, Description = Protein DETOXIFICATION 31, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf04973_26002-31626' '(at5g52450 : 503.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G34360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36561 : 445.0) no description available & (gnl|cdd|30880 : 194.0) no description available & (reliability: 1006.0) & (original description: Putative DTX16, Description = Protein DETOXIFICATION 16, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf05061_253614-261652' '(at1g61250 : 349.0) Encodes a putative secretory carrier membrane protein (SC3).; secretory carrier 3 (SC3); FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: protein transport; CONTAINS InterPro DOMAIN/s: SCAMP (InterPro:IPR007273); BEST Arabidopsis thaliana protein match is: Secretory carrier membrane protein (SCAMP) family protein (TAIR:AT1G11180.1). & (gnl|cdd|38298 : 335.0) no description available & (gnl|cdd|67747 : 244.0) no description available & (reliability: 698.0) & (original description: Putative SCAMP1, Description = Secretory carrier-associated membrane protein 1, PFAM = PF04144)' T '34.99' 'transport.misc' 'niben101scf05348_263574-267001' '(at4g22790 : 469.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G29140.1); Has 7578 Blast hits to 7441 proteins in 1706 species: Archae - 65; Bacteria - 4933; Metazoa - 143; Fungi - 328; Plants - 1275; Viruses - 0; Other Eukaryotes - 834 (source: NCBI BLink). & (gnl|cdd|36561 : 307.0) no description available & (gnl|cdd|30880 : 153.0) no description available & (reliability: 938.0) & (original description: Putative DTX56, Description = Protein DETOXIFICATION 56, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf05437_64602-69178' '(at5g52450 : 500.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G34360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36561 : 440.0) no description available & (gnl|cdd|30880 : 195.0) no description available & (reliability: 1000.0) & (original description: Putative DTX16, Description = Protein DETOXIFICATION 16, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf05631_23403-40499' '(at1g71140 : 463.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G15150.1); Has 10143 Blast hits to 10059 proteins in 1990 species: Archae - 227; Bacteria - 7201; Metazoa - 146; Fungi - 330; Plants - 1347; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink). & (gnl|cdd|36561 : 403.0) no description available & (gnl|cdd|30880 : 173.0) no description available & (reliability: 926.0) & (original description: Putative DTX14, Description = Protein DETOXIFICATION 14, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf05698_136003-145486' '(at2g16650 : 490.0) proteinaceous RNase P 2 (PRORP2); FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: nucleus; EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribonuclease Zc3h12a-like (InterPro:IPR021869), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: proteinaceous RNase P 3 (TAIR:AT4G21900.1); Has 397 Blast hits to 377 proteins in 89 species: Archae - 0; Bacteria - 0; Metazoa - 82; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 938.0) & (original description: Putative PRORP3, Description = Proteinaceous RNase P 3, PFAM = PF16953;PF17177)' T '34.99' 'transport.misc' 'niben101scf05712_93132-99523' '(at1g26690 : 282.0) emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT1G69460.1); Has 1567 Blast hits to 1565 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 472; Plants - 246; Viruses - 0; Other Eukaryotes - 159 (source: NCBI BLink). & (gnl|cdd|36904 : 250.0) no description available & (reliability: 564.0) & (original description: Putative At1g26690, Description = Transmembrane emp24 domain-containing protein p24delta9, PFAM = PF01105)' T '34.99' 'transport.misc' 'niben101scf05732_186950-193469' '(at1g09580 : 267.0) emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT1G57620.1); Has 1762 Blast hits to 1760 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 806; Fungi - 509; Plants - 239; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink). & (gnl|cdd|36904 : 264.0) no description available & (reliability: 534.0) & (original description: Putative At1g21900, Description = Transmembrane emp24 domain-containing protein p24delta5, PFAM = PF01105)' T '34.99' 'transport.misc' 'niben101scf05822_399861-406389' '(at5g01990 : 490.0) Auxin efflux carrier family protein; FUNCTIONS IN: auxin:hydrogen symporter activity; INVOLVED IN: auxin polar transport, transmembrane transport; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G71090.1); Has 514 Blast hits to 486 proteins in 113 species: Archae - 2; Bacteria - 6; Metazoa - 0; Fungi - 225; Plants - 217; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|37933 : 402.0) no description available & (gnl|cdd|86363 : 176.0) no description available & (reliability: 980.0) & (original description: Putative PILS6, Description = Protein PIN-LIKES 6, PFAM = PF03547)' T '34.99' 'transport.misc' 'niben101scf05948_716401-722921' '(at2g34250 : 844.0) SecY protein transport family protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: response to salt stress, protein secretion; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SecY protein (InterPro:IPR002208), Translocon Sec61/SecY, plug domain (InterPro:IPR019561); BEST Arabidopsis thaliana protein match is: SecY protein transport family protein (TAIR:AT1G29310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36587 : 742.0) no description available & (gnl|cdd|82683 : 344.0) no description available & (reliability: 1684.0) & (original description: Putative sec61a, Description = Protein transport protein Sec61 subunit alpha, PFAM = PF10559;PF00344)' T '34.99' 'transport.misc' 'niben101scf05955_462023-467971' '(at3g23560 : 492.0) Member of the multidrug and toxic compound extrusion (MATE) family, protects roots from inhibitory compounds.; ABERRANT LATERAL ROOT FORMATION 5 (ALF5); FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to toxin; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT3G23550.1); Has 11709 Blast hits to 11651 proteins in 2060 species: Archae - 284; Bacteria - 8224; Metazoa - 146; Fungi - 324; Plants - 1351; Viruses - 0; Other Eukaryotes - 1380 (source: NCBI BLink). & (gnl|cdd|36561 : 358.0) no description available & (gnl|cdd|30880 : 182.0) no description available & (reliability: 984.0) & (original description: Putative DTX19, Description = Protein DETOXIFICATION 19, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf05977_108279-111733' '(at4g22790 : 488.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G29140.1); Has 7578 Blast hits to 7441 proteins in 1706 species: Archae - 65; Bacteria - 4933; Metazoa - 143; Fungi - 328; Plants - 1275; Viruses - 0; Other Eukaryotes - 834 (source: NCBI BLink). & (gnl|cdd|36561 : 305.0) no description available & (gnl|cdd|30880 : 155.0) no description available & (reliability: 976.0) & (original description: Putative BnaC01g14250D, Description = Protein DETOXIFICATION, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf06207_133191-136762' '(at4g23030 : 511.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: stem, male gametophyte, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G52050.1); Has 11257 Blast hits to 11210 proteins in 2068 species: Archae - 244; Bacteria - 8067; Metazoa - 149; Fungi - 328; Plants - 1302; Viruses - 0; Other Eukaryotes - 1167 (source: NCBI BLink). & (gnl|cdd|36561 : 401.0) no description available & (gnl|cdd|30880 : 184.0) no description available & (reliability: 940.0) & (original description: Putative DTX50, Description = Protein DETOXIFICATION 50, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf06207_133224-136789' '(at4g23030 : 511.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: stem, male gametophyte, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G52050.1); Has 11257 Blast hits to 11210 proteins in 2068 species: Archae - 244; Bacteria - 8067; Metazoa - 149; Fungi - 328; Plants - 1302; Viruses - 0; Other Eukaryotes - 1167 (source: NCBI BLink). & (gnl|cdd|36561 : 401.0) no description available & (gnl|cdd|30880 : 184.0) no description available & (reliability: 940.0) & (original description: Putative DTX49, Description = Protein DETOXIFICATION 49, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf06323_31189-39342' '(at3g21690 : 639.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G61890.1); Has 11325 Blast hits to 11232 proteins in 2038 species: Archae - 269; Bacteria - 8227; Metazoa - 142; Fungi - 332; Plants - 1357; Viruses - 0; Other Eukaryotes - 998 (source: NCBI BLink). & (gnl|cdd|36561 : 441.0) no description available & (gnl|cdd|30880 : 181.0) no description available & (reliability: 1278.0) & (original description: Putative RHS2, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf06394_754507-851043' '(at1g66780 : 126.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G64820.1); Has 9685 Blast hits to 9584 proteins in 1890 species: Archae - 189; Bacteria - 6754; Metazoa - 148; Fungi - 326; Plants - 1364; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). & (gnl|cdd|36561 : 118.0) no description available & (reliability: 252.0) & (original description: Putative BnaC02g46480D, Description = BnaC02g46480D protein, PFAM = PF01554)' T '34.99' 'transport.misc' 'niben101scf06491_22060-31414' '(at1g25500 : 595.0) Plasma-membrane choline transporter family protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF580 (InterPro:IPR007603); BEST Arabidopsis thaliana protein match is: Plasma-membrane choline transporter family protein (TAIR:AT5G13760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36576 : 262.0) no description available & (gnl|cdd|68100 : 232.0) no description available & (reliability: 1190.0) & (original description: Putative Sb04g024030, Description = Putative uncharacterized protein Sb04g024030, PFAM = PF04515)' T '34.99' 'transport.misc' 'niben101scf06562_38520-44574' '(at5g63060 : 335.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G08690.1); Has 1770 Blast hits to 1770 proteins in 221 species: Archae - 0; Bacteria - 0; Metazoa - 487; Fungi - 470; Plants - 671; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (gnl|cdd|36683 : 181.0) no description available & (gnl|cdd|47819 : 88.5) no description available & (reliability: 670.0) & (original description: Putative At5g63060, Description = Sec14p-like phosphatidylinositol transfer family protein, PFAM = PF00650)' T '34.99' 'transport.misc' 'niben101scf06650_522027-532884' '(at2g32040 : 576.0) The At2g32040 gene product has been demonstrated to mediate folate monoglutamate transport involved in tetrahydrofolate biosynthesis. It also mediates transport of antifolates, such as methotrexate and aminopterin. The gene is expressed in both chloroplast and non-green plastids.; Major facilitator superfamily protein; FUNCTIONS IN: folic acid transporter activity, 5-formyltetrahydrofolate transporter activity, transporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily, general substrate transporter (InterPro:IPR016196), Biopterin transport-related protein BT1 (InterPro:IPR004324); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G25050.1); Has 2017 Blast hits to 1915 proteins in 421 species: Archae - 4; Bacteria - 671; Metazoa - 3; Fungi - 33; Plants - 272; Viruses - 0; Other Eukaryotes - 1034 (source: NCBI BLink). & (gnl|cdd|66747 : 330.0) no description available & (reliability: 1152.0) & (original description: Putative fbt, Description = Folate/biopterin transporter, PFAM = PF03092;PF03092;PF03092)' T '34.99' 'transport.misc' 'niben101scf06791_74680-86552' '(at2g27810 : 838.0) nucleobase-ascorbate transporter 12; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil permease family protein (TAIR:AT4G38050.1); Has 8924 Blast hits to 8893 proteins in 1864 species: Archae - 69; Bacteria - 7265; Metazoa - 476; Fungi - 122; Plants - 377; Viruses - 11; Other Eukaryotes - 604 (source: NCBI BLink). & (gnl|cdd|36506 : 564.0) no description available & (gnl|cdd|85076 : 199.0) no description available & (reliability: 1676.0) & (original description: Putative NAT12, Description = Nucleobase-ascorbate transporter 12, PFAM = PF00860)' T '34.99' 'transport.misc' 'niben101scf07181_14056-27026' '(at1g60030 : 604.0) nucleobase-ascorbate transporter 7 (NAT7); FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: nucleobase-ascorbate transporter 8 (TAIR:AT1G10540.1); Has 9221 Blast hits to 9205 proteins in 1877 species: Archae - 67; Bacteria - 7547; Metazoa - 349; Fungi - 126; Plants - 456; Viruses - 1; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|36506 : 595.0) no description available & (gnl|cdd|85076 : 179.0) no description available & (reliability: 1208.0) & (original description: Putative LPE1, Description = Nucleobase-ascorbate transporter-like protein, PFAM = PF00860)' T '34.99' 'transport.misc' 'niben101scf07191_65646-72781' '(q9fel7|lax2_medtr : 761.0) Auxin transporter-like protein 2 (AUX1-like protein 2) (MtLAX2) - Medicago truncatula (Barrel medic) & (at2g38120 : 746.0) Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning.; AUXIN RESISTANT 1 (AUX1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUXIN RESISTANT 1 (TAIR:AT5G01240.1); Has 1256 Blast hits to 1251 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 283; Plants - 825; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|36517 : 296.0) no description available & (gnl|cdd|85489 : 211.0) no description available & (reliability: 1492.0) & (original description: Putative LAX2, Description = Auxin transporter-like protein 2, PFAM = PF01490)' T '34.99' 'transport.misc' 'niben101scf07236_75490-83021' '(at5g58030 : 357.0) Transport protein particle (TRAPP) component; CONTAINS InterPro DOMAIN/s: Transport protein particle (TRAPP) component (InterPro:IPR007194), TRAPP I complex, Trs31 (InterPro:IPR016696); Has 560 Blast hits to 545 proteins in 219 species: Archae - 0; Bacteria - 0; Metazoa - 199; Fungi - 199; Plants - 63; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (gnl|cdd|38525 : 265.0) no description available & (gnl|cdd|34729 : 179.0) no description available & (reliability: 714.0) & (original description: Putative trappc5, Description = Trafficking protein particle complex subunit 5, PFAM = PF04051)' T '34.99' 'transport.misc' 'niben101scf07386_65172-79546' '(at1g16390 : 305.0) organic cation/carnitine transporter 3 (3-Oct); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: organic cation/carnitine transporter 2 (TAIR:AT1G79360.1); Has 22920 Blast hits to 22877 proteins in 2010 species: Archae - 415; Bacteria - 11427; Metazoa - 4445; Fungi - 4126; Plants - 1629; Viruses - 0; Other Eukaryotes - 878 (source: NCBI BLink). & (gnl|cdd|35476 : 175.0) no description available & (gnl|cdd|84502 : 103.0) no description available & (reliability: 592.0) & (original description: Putative BnaC08g16940D, Description = BnaC08g16940D protein, PFAM = PF07690)' T '34.99' 'transport.misc' 'niben101scf07488_33572-39794' '(gnl|cdd|38298 : 371.0) no description available & (at1g61250 : 364.0) Encodes a putative secretory carrier membrane protein (SC3).; secretory carrier 3 (SC3); FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: protein transport; CONTAINS InterPro DOMAIN/s: SCAMP (InterPro:IPR007273); BEST Arabidopsis thaliana protein match is: Secretory carrier membrane protein (SCAMP) family protein (TAIR:AT1G11180.1). & (gnl|cdd|67747 : 257.0) no description available & (reliability: 728.0) & (original description: Putative SCAMP1, Description = Secretory carrier-associated membrane protein 1, PFAM = PF04144)' T '34.99' 'transport.misc' 'niben101scf07498_194422-200898' '(gnl|cdd|86910 : 332.0) no description available & (gnl|cdd|38133 : 325.0) no description available & (at3g23870 : 242.0) Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF803) (TAIR:AT4G13800.1); Has 1388 Blast hits to 1369 proteins in 245 species: Archae - 2; Bacteria - 146; Metazoa - 422; Fungi - 370; Plants - 270; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative At1g34470, Description = Probable magnesium transporter, PFAM = PF05653;PF05653)' T '34.99' 'transport.misc' 'niben101scf07527_188085-194251' '(gnl|cdd|38298 : 302.0) no description available & (at2g20840 : 299.0) Secretory carrier membrane protein (SCAMP) family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SCAMP (InterPro:IPR007273); BEST Arabidopsis thaliana protein match is: Secretory carrier membrane protein (SCAMP) family protein (TAIR:AT1G03550.1); Has 686 Blast hits to 684 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 376; Fungi - 14; Plants - 230; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|67747 : 205.0) no description available & (reliability: 598.0) & (original description: Putative SC, Description = Secretory carrier-associated membrane protein, PFAM = PF04144)' T '34.99' 'transport.misc' 'niben101scf07664_183459-192102' '(at1g76530 : 112.0) Auxin efflux carrier family protein; FUNCTIONS IN: auxin:hydrogen symporter activity; INVOLVED IN: auxin polar transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G76520.2); Has 560 Blast hits to 535 proteins in 95 species: Archae - 4; Bacteria - 2; Metazoa - 0; Fungi - 181; Plants - 324; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|37933 : 101.0) no description available & (reliability: 224.0) & (original description: Putative AHS, Description = Auxin efflux carrier family protein, PFAM = PF03547)' T '34.99' 'transport.misc' 'niben101scf07767_50728-61968' '(at1g72560 : 1462.0) Encodes a karyopherin, specifically the Arabidopsis ortholog of LOS1/XPOT, a protein that mediates nuclear export of tRNAs in yeast and mammals. PSD is capable of rescuing the tRNA export defect of los1 in S. cerevisiae. psd mutants display disrupted initiation of the shoot apical meristem and delay leaf initiation after germination; they also display delayed transition from vegetative to reproductive development.; PAUSED (PSD); CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024). & (gnl|cdd|37232 : 963.0) no description available & (gnl|cdd|87516 : 124.0) no description available & (reliability: 2924.0) & (original description: Putative PSD, Description = Exportin-T, PFAM = PF08389)' T '34.99' 'transport.misc' 'niben101scf08065_12209-20544' '(at1g20925 : 427.0) Auxin efflux carrier family protein; FUNCTIONS IN: auxin:hydrogen symporter activity; INVOLVED IN: auxin polar transport, transmembrane transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G76520.2); Has 641 Blast hits to 607 proteins in 137 species: Archae - 6; Bacteria - 69; Metazoa - 0; Fungi - 180; Plants - 327; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|37933 : 359.0) no description available & (gnl|cdd|86363 : 146.0) no description available & (reliability: 802.0) & (original description: Putative AHS, Description = Auxin efflux carrier family protein, PFAM = PF03547)' T '34.99' 'transport.misc' 'niben101scf08065_12950-20010' '(at1g20925 : 455.0) Auxin efflux carrier family protein; FUNCTIONS IN: auxin:hydrogen symporter activity; INVOLVED IN: auxin polar transport, transmembrane transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G76520.2); Has 641 Blast hits to 607 proteins in 137 species: Archae - 6; Bacteria - 69; Metazoa - 0; Fungi - 180; Plants - 327; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|37933 : 395.0) no description available & (gnl|cdd|86363 : 161.0) no description available & (reliability: 844.0) & (original description: Putative PILS1, Description = Protein PIN-LIKES 1, PFAM = PF03547)' T '34.99' 'transport.misc' 'niben101scf08175_26655-30609' '(at1g58340 : 615.0) ZF14; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to nematode; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G29140.1); Has 10543 Blast hits to 10463 proteins in 2002 species: Archae - 229; Bacteria - 7598; Metazoa - 148; Fungi - 324; Plants - 1321; Viruses - 0; Other Eukaryotes - 923 (source: NCBI BLink). & (gnl|cdd|36561 : 394.0) no description available & (gnl|cdd|30880 : 186.0) no description available & (reliability: 1230.0) & (original description: Putative DTX48, Description = Protein DETOXIFICATION 48, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf08222_245051-251702' '(o24381|tlc1_soltu : 1012.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (at1g80300 : 850.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (gnl|cdd|66864 : 648.0) no description available & (reliability: 1700.0) & (original description: Putative npt, Description = ADP,ATP carrier protein 1, PFAM = PF03219)' T '34.99' 'transport.misc' 'niben101scf08322_43850-52744' '(at1g32050 : 394.0) SCAMP family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SCAMP (InterPro:IPR007273); BEST Arabidopsis thaliana protein match is: secretory carrier 3 (TAIR:AT1G61250.1); Has 679 Blast hits to 677 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 375; Fungi - 14; Plants - 225; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|38298 : 319.0) no description available & (gnl|cdd|67747 : 239.0) no description available & (reliability: 788.0) & (original description: Putative SCAMP4, Description = Secretory carrier-associated membrane protein 4, PFAM = PF04144)' T '34.99' 'transport.misc' 'niben101scf08338_192291-195729' '(at3g21690 : 236.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G61890.1); Has 11325 Blast hits to 11232 proteins in 2038 species: Archae - 269; Bacteria - 8227; Metazoa - 142; Fungi - 332; Plants - 1357; Viruses - 0; Other Eukaryotes - 998 (source: NCBI BLink). & (gnl|cdd|36561 : 150.0) no description available & (reliability: 472.0) & (original description: Putative T8O5, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554)' T '34.99' 'transport.misc' 'niben101scf08478_72500-79381' '(gnl|cdd|86910 : 390.0) no description available & (gnl|cdd|38133 : 383.0) no description available & (at1g34470 : 356.0) Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF803) (TAIR:AT4G09640.1); Has 1275 Blast hits to 1251 proteins in 224 species: Archae - 0; Bacteria - 101; Metazoa - 420; Fungi - 374; Plants - 269; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (reliability: 710.0) & (original description: Putative At4g13800, Description = Probable magnesium transporter NIPA2, PFAM = PF05653)' T '34.99' 'transport.misc' 'niben101scf08630_72564-75654' '(at3g59280 : 139.0) mutant exhibited resistance to growth on media containing thaxtomin due to a difference in the rate of uptake of the toxin.We proposed that TXR1 is a component of, or regulator of, a dispensable transport mechanism.; THAXTOMIN A RESISTANT 1 (TXR1); INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein Transporter, Pam16 (InterPro:IPR005341); BEST Arabidopsis thaliana protein match is: Protein Transporter, Pam16 (TAIR:AT5G61880.2); Has 398 Blast hits to 398 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 132; Plants - 79; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|38652 : 100.0) no description available & (reliability: 278.0) & (original description: Putative TXR1, Description = AT3g59280/F25L23_140, PFAM = PF03656)' T '34.99' 'transport.misc' 'niben101scf08653_80876-89606' '(at5g52450 : 553.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G34360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36561 : 446.0) no description available & (gnl|cdd|30880 : 188.0) no description available & (reliability: 1106.0) & (original description: Putative DTX16, Description = Protein DETOXIFICATION 16, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf08785_339767-343515' '(at1g29520 : 204.0) AWPM-19-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like family protein (TAIR:AT5G46530.1); Has 177 Blast hits to 177 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69056 : 188.0) no description available & (reliability: 408.0) & (original description: Putative lea, Description = ABA induced plasma membrane protein, PFAM = PF05512)' T '34.99' 'transport.misc' 'niben101scf08926_338729-344719' '(at5g01990 : 559.0) Auxin efflux carrier family protein; FUNCTIONS IN: auxin:hydrogen symporter activity; INVOLVED IN: auxin polar transport, transmembrane transport; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G71090.1); Has 514 Blast hits to 486 proteins in 113 species: Archae - 2; Bacteria - 6; Metazoa - 0; Fungi - 225; Plants - 217; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|37933 : 411.0) no description available & (gnl|cdd|86363 : 186.0) no description available & (reliability: 1118.0) & (original description: Putative PILS6, Description = Protein PIN-LIKES 6, PFAM = PF03547)' T '34.99' 'transport.misc' 'niben101scf08982_45368-50283' '(at4g00350 : 689.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: detoxifying efflux carrier 35 (TAIR:AT4G25640.1); Has 10139 Blast hits to 10053 proteins in 1934 species: Archae - 181; Bacteria - 7281; Metazoa - 140; Fungi - 324; Plants - 1355; Viruses - 0; Other Eukaryotes - 858 (source: NCBI BLink). & (gnl|cdd|36561 : 412.0) no description available & (gnl|cdd|30880 : 170.0) no description available & (reliability: 1378.0) & (original description: Putative DTX34, Description = Protein DETOXIFICATION 34, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf09011_112003-130263' '(at5g65380 : 554.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, ripening, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G44050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36561 : 440.0) no description available & (gnl|cdd|30880 : 170.0) no description available & (reliability: 1022.0) & (original description: Putative DTX27, Description = Protein DETOXIFICATION 27, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf09282_2820-7048' '(at5g03380 : 150.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G36950.1); Has 4435 Blast hits to 3252 proteins in 419 species: Archae - 9; Bacteria - 432; Metazoa - 923; Fungi - 249; Plants - 2333; Viruses - 0; Other Eukaryotes - 489 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative BnaAnng00630D, Description = BnaAnng00630D protein, PFAM = PF00403;PF00403)' T '34.99' 'transport.misc' 'niben101scf09372_486218-489549' '(gnl|cdd|69056 : 130.0) no description available & (at1g04560 : 128.0) AWPM-19-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like family protein (TAIR:AT5G46530.1); Has 177 Blast hits to 177 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative GmPM3, Description = PGmPM3, PFAM = PF05512)' T '34.99' 'transport.misc' 'niben101scf09828_43459-48436' '(at5g58070 : 292.0) Encodes a temperature-induced lipocalin TIL1. Involved in thermotolerance. Peripherally associated with plasma membrane.; temperature-induced lipocalin (TIL); FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, response to cold, response to light stimulus, response to heat; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Lipocalin, bacterial (InterPro:IPR002446), Lipocalin, ApoD type (InterPro:IPR022271), Lipocalin-like (InterPro:IPR013208), Lipocalin conserved site (InterPro:IPR022272), Calycin (InterPro:IPR012674), Calycin-like (InterPro:IPR011038); Has 2007 Blast hits to 1991 proteins in 692 species: Archae - 0; Bacteria - 1480; Metazoa - 169; Fungi - 10; Plants - 132; Viruses - 6; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|40021 : 204.0) no description available & (gnl|cdd|87463 : 163.0) no description available & (reliability: 584.0) & (original description: Putative TIL, Description = Temperature-induced lipocalin-1, PFAM = PF08212)' T '34.99' 'transport.misc' 'niben101scf09928_236625-243182' '(at1g79710 : 582.0) Major facilitator superfamily protein; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily, general substrate transporter (InterPro:IPR016196), Biopterin transport-related protein BT1 (InterPro:IPR004324); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G25050.1); Has 1010 Blast hits to 995 proteins in 167 species: Archae - 4; Bacteria - 188; Metazoa - 0; Fungi - 6; Plants - 265; Viruses - 0; Other Eukaryotes - 547 (source: NCBI BLink). & (gnl|cdd|66747 : 356.0) no description available & (reliability: 1164.0) & (original description: Putative At1g79710, Description = Probable folate-biopterin transporter 3, PFAM = PF03092;PF03092)' T '34.99' 'transport.misc' 'niben101scf10041_72538-83385' '(at3g03620 : 502.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G17700.1); Has 8317 Blast hits to 8249 proteins in 1758 species: Archae - 126; Bacteria - 5711; Metazoa - 138; Fungi - 320; Plants - 1334; Viruses - 0; Other Eukaryotes - 688 (source: NCBI BLink). & (gnl|cdd|36561 : 383.0) no description available & (gnl|cdd|30880 : 152.0) no description available & (reliability: 1004.0) & (original description: Putative DTX24, Description = Protein DETOXIFICATION 24, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf10101_65908-74907' '(at4g30510 : 379.0) ARABIDOPSIS THALIANA HOMOLOG OF YEAST AUTOPHAGY 18 (ATG18) B (ATATG18B); CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G62770.3); Has 1236 Blast hits to 1191 proteins in 226 species: Archae - 0; Bacteria - 2; Metazoa - 531; Fungi - 404; Plants - 152; Viruses - 2; Other Eukaryotes - 145 (source: NCBI BLink). & (gnl|cdd|37321 : 286.0) no description available & (reliability: 758.0) & (original description: Putative ATG18B, Description = Autophagy-related protein 18b, PFAM = )' T '34.99' 'transport.misc' 'niben101scf10575_24092-29357' '(at1g47530 : 430.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, ripening, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: root hair specific 2 (TAIR:AT1G12950.1); Has 9964 Blast hits to 9893 proteins in 2013 species: Archae - 182; Bacteria - 7111; Metazoa - 140; Fungi - 326; Plants - 1355; Viruses - 0; Other Eukaryotes - 850 (source: NCBI BLink). & (gnl|cdd|36561 : 404.0) no description available & (gnl|cdd|30880 : 185.0) no description available & (reliability: 832.0) & (original description: Putative Sb03g035610, Description = Protein DETOXIFICATION, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf10842_32981-36859' '(at1g47530 : 378.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, ripening, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: root hair specific 2 (TAIR:AT1G12950.1); Has 9964 Blast hits to 9893 proteins in 2013 species: Archae - 182; Bacteria - 7111; Metazoa - 140; Fungi - 326; Plants - 1355; Viruses - 0; Other Eukaryotes - 850 (source: NCBI BLink). & (gnl|cdd|36561 : 353.0) no description available & (gnl|cdd|30880 : 146.0) no description available & (reliability: 738.0) & (original description: Putative FFT, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf10866_187645-191439' '(at1g14010 : 276.0) emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: guard cell, callus; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT1G26690.1); Has 1568 Blast hits to 1566 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 707; Fungi - 431; Plants - 276; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink). & (gnl|cdd|36904 : 253.0) no description available & (reliability: 552.0) & (original description: Putative At2g03290, Description = Transmembrane emp24 domain-containing protein p24delta8, PFAM = PF01105)' T '34.99' 'transport.misc' 'niben101scf11184_72583-77092' '(at1g78130 : 626.0) unfertilized embryo sac 2 (UNE2); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G10190.1); Has 16910 Blast hits to 16851 proteins in 2099 species: Archae - 450; Bacteria - 14339; Metazoa - 386; Fungi - 319; Plants - 340; Viruses - 3; Other Eukaryotes - 1073 (source: NCBI BLink). & (gnl|cdd|36544 : 430.0) no description available & (gnl|cdd|87335 : 105.0) no description available & (reliability: 1174.0) & (original description: Putative At5g10190, Description = Major facilitator protein, PFAM = PF07690)' T '34.99' 'transport.misc' 'niben101scf12540_9513-19082' '(at5g54860 : 612.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily, general substrate transporter (InterPro:IPR016196), Biopterin transport-related protein BT1 (InterPro:IPR004324); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G64890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66747 : 168.0) no description available & (reliability: 1224.0) & (original description: Putative At5g54860, Description = Probable folate-biopterin transporter 4, PFAM = PF03092)' T '34.99' 'transport.misc' 'niben101scf12568_18366-28017' '(at2g26510 : 686.0) permease; pigment defective embryo 135 (PDE135); FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil permease family protein (TAIR:AT2G05760.1). & (gnl|cdd|36506 : 584.0) no description available & (gnl|cdd|85076 : 190.0) no description available & (reliability: 1372.0) & (original description: Putative NAT3, Description = Nucleobase-ascorbate transporter 3, PFAM = PF00860)' T '34.99' 'transport.misc' 'niben101scf12623_1893-10907' '(at1g32050 : 226.0) SCAMP family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SCAMP (InterPro:IPR007273); BEST Arabidopsis thaliana protein match is: secretory carrier 3 (TAIR:AT1G61250.1); Has 679 Blast hits to 677 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 375; Fungi - 14; Plants - 225; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|38298 : 179.0) no description available & (gnl|cdd|67747 : 149.0) no description available & (reliability: 452.0) & (original description: Putative SC, Description = Secretory carrier membrane protein, PFAM = PF04144)' T '34.99' 'transport.misc' 'niben101scf13710_347831-356802' '(at4g36790 : 638.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G18590.1); Has 13584 Blast hits to 13542 proteins in 1941 species: Archae - 325; Bacteria - 10929; Metazoa - 520; Fungi - 516; Plants - 316; Viruses - 4; Other Eukaryotes - 974 (source: NCBI BLink). & (gnl|cdd|36544 : 386.0) no description available & (reliability: 1276.0) & (original description: Putative Sb02g006340, Description = Putative uncharacterized protein Sb02g006340, PFAM = PF07690)' T '34.99' 'transport.misc' 'niben101scf14028_198233-204186' '(at1g60030 : 862.0) nucleobase-ascorbate transporter 7 (NAT7); FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: nucleobase-ascorbate transporter 8 (TAIR:AT1G10540.1); Has 9221 Blast hits to 9205 proteins in 1877 species: Archae - 67; Bacteria - 7547; Metazoa - 349; Fungi - 126; Plants - 456; Viruses - 1; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|36506 : 668.0) no description available & (gnl|cdd|85076 : 176.0) no description available & (reliability: 1724.0) & (original description: Putative NAT7, Description = Nucleobase-ascorbate transporter 7, PFAM = PF00860)' T '34.99' 'transport.misc' 'niben101scf14410_33525-38422' '(at1g72160 : 382.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), GOLD (InterPro:IPR009038), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (TAIR:AT4G09160.1); Has 4473 Blast hits to 3903 proteins in 364 species: Archae - 35; Bacteria - 264; Metazoa - 1504; Fungi - 917; Plants - 883; Viruses - 13; Other Eukaryotes - 857 (source: NCBI BLink). & (gnl|cdd|36684 : 179.0) no description available & (gnl|cdd|29115 : 118.0) no description available & (reliability: 714.0) & (original description: Putative PATL6, Description = Patellin-6, PFAM = PF03765;PF00650)' T '34.99' 'transport.misc' 'niben101scf14458_18716-24850' '(at2g34190 : 904.0) Xanthine/uracil permease family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil permease family protein (TAIR:AT2G05760.1); Has 8712 Blast hits to 8692 proteins in 1893 species: Archae - 67; Bacteria - 7003; Metazoa - 354; Fungi - 119; Plants - 444; Viruses - 1; Other Eukaryotes - 724 (source: NCBI BLink). & (gnl|cdd|36506 : 644.0) no description available & (gnl|cdd|85076 : 178.0) no description available & (reliability: 1808.0) & (original description: Putative NAT2, Description = Nucleobase-ascorbate transporter 2, PFAM = PF00860)' T '34.99' 'transport.misc' 'niben101scf14803_12511-27834' '(gnl|cdd|37933 : 318.0) no description available & (at1g20925 : 305.0) Auxin efflux carrier family protein; FUNCTIONS IN: auxin:hydrogen symporter activity; INVOLVED IN: auxin polar transport, transmembrane transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G76520.2); Has 641 Blast hits to 607 proteins in 137 species: Archae - 6; Bacteria - 69; Metazoa - 0; Fungi - 180; Plants - 327; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|86363 : 130.0) no description available & (reliability: 592.0) & (original description: Putative PILS3, Description = Protein PIN-LIKES 3, PFAM = PF03547)' T '34.99' 'transport.misc' 'niben101scf14989_82790-91094' '(at5g25050 : 597.0) Major facilitator superfamily protein; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily, general substrate transporter (InterPro:IPR016196), Biopterin transport-related protein BT1 (InterPro:IPR004324); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G25040.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66747 : 348.0) no description available & (reliability: 1194.0) & (original description: Putative At5g25050, Description = Probable folate-biopterin transporter 2, PFAM = PF03092;PF03092)' T '34.99' 'transport.misc' 'niben101scf15739_191559-196881' '(at2g21540 : 568.0) SEC14-like 3 (SFH3); FUNCTIONS IN: phosphatidylinositol transporter activity; INVOLVED IN: flower development, transport; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39180.1). & (gnl|cdd|36684 : 265.0) no description available & (gnl|cdd|84928 : 140.0) no description available & (reliability: 1024.0) & (original description: Putative SFH12, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH12, PFAM = PF03765;PF00650)' T '34.99' 'transport.misc' 'niben101scf15836_466963-470997' '(at5g60800 : 101.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G36950.1). & (reliability: 202.0) & (original description: Putative A15, Description = Heavy metal-associated domain, HMA, PFAM = PF00403)' T '34.99' 'transport.misc' 'niben101scf16448_44398-50039' '(at4g25640 : 635.0) Encodes a multidrug and toxin efflux family transporter. Involved in flavonoid metabolism, affecting Root growth, seed development and germination, and pollen development, release and viability.; detoxifying efflux carrier 35 (DTX35); FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: anther dehiscence, flavonoid metabolic process, pollen development; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G00350.1). & (gnl|cdd|36561 : 406.0) no description available & (gnl|cdd|30880 : 175.0) no description available & (reliability: 1270.0) & (original description: Putative DTX35, Description = Protein DETOXIFICATION 35, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf17922_55145-69558' '(at5g46150 : 451.0) LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284, transmembrane eukaryotic (InterPro:IPR005045); BEST Arabidopsis thaliana protein match is: ALA-interacting subunit 1 (TAIR:AT3G12740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38163 : 373.0) no description available & (gnl|cdd|67019 : 263.0) no description available & (reliability: 814.0) & (original description: Putative ALIS2, Description = Putative ALA-interacting subunit 2, PFAM = PF03381)' T '34.99' 'transport.misc' 'niben101scf20097_72256-80958' '(at2g21520 : 872.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36684 : 276.0) no description available & (gnl|cdd|84928 : 137.0) no description available & (reliability: 1744.0) & (original description: Putative SFH8, Description = Phosphatidylinositol/phosphatidylcholine transfer protein SFH8, PFAM = PF00650;PF03765)' T '34.99' 'transport.misc' 'niben101scf20669_162086-168839' '(gnl|cdd|35474 : 431.0) no description available & (at3g13050 : 422.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: organic cation/carnitine transporter4 (TAIR:AT3G20660.1); Has 38439 Blast hits to 37687 proteins in 2363 species: Archae - 738; Bacteria - 22281; Metazoa - 5017; Fungi - 6515; Plants - 2234; Viruses - 0; Other Eukaryotes - 1654 (source: NCBI BLink). & (gnl|cdd|84502 : 129.0) no description available & (reliability: 844.0) & (original description: Putative 39356, Description = Organic cation/carnitine transporter 7, PFAM = PF00083)' T '34.99' 'transport.misc' 'niben101scf23606_389-3369' '(at5g52450 : 149.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G34360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36561 : 131.0) no description available & (reliability: 298.0) & (original description: Putative DTX15, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554)' T '34.99' 'transport.misc' 'niben101scf23606_2399-5667' '(at5g52450 : 130.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G34360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36561 : 112.0) no description available & (reliability: 260.0) & (original description: Putative RIP, Description = Multidrug and toxic compound extrusion protein, PFAM = PF01554)' T '34.99' 'transport.misc' 'niben101scf23606_6301-11520' '(at5g52450 : 512.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G34360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36561 : 435.0) no description available & (gnl|cdd|30880 : 199.0) no description available & (reliability: 1024.0) & (original description: Putative PGSC0003DMG400025433, Description = Protein DETOXIFICATION, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf24155_6256-40002' '(at1g12950 : 544.0) root hair specific 2 (RSH2); FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: sperm cell, root hair, root; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT3G26590.1); Has 9730 Blast hits to 9684 proteins in 1960 species: Archae - 180; Bacteria - 6829; Metazoa - 143; Fungi - 326; Plants - 1351; Viruses - 0; Other Eukaryotes - 901 (source: NCBI BLink). & (gnl|cdd|36561 : 444.0) no description available & (gnl|cdd|30880 : 176.0) no description available & (reliability: 1088.0) & (original description: Putative DTX31, Description = Protein DETOXIFICATION 31, PFAM = PF01554;PF01554)' T '34.99' 'transport.misc' 'niben101scf24155_6265-11044' '(at1g12950 : 363.0) root hair specific 2 (RSH2); FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: sperm cell, root hair, root; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT3G26590.1); Has 9730 Blast hits to 9684 proteins in 1960 species: Archae - 180; Bacteria - 6829; Metazoa - 143; Fungi - 326; Plants - 1351; Viruses - 0; Other Eukaryotes - 901 (source: NCBI BLink). & (gnl|cdd|36561 : 271.0) no description available & (gnl|cdd|30880 : 96.1) no description available & (reliability: 726.0) & (original description: Putative BnaA01g06400D, Description = BnaA01g06400D protein, PFAM = PF01554)' T '35' 'not assigned' '' '' '35.1' 'not assigned.no ontology' 'nbv0.3scaffold171_20870-54159' '(at5g13020 : 346.0) Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), ENT (InterPro:IPR005491); BEST Arabidopsis thaliana protein match is: Emsy N Terminus (ENT) domain-containing protein (TAIR:AT2G44440.1); Has 417 Blast hits to 397 proteins in 49 species: Archae - 0; Bacteria - 2; Metazoa - 101; Fungi - 4; Plants - 307; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|39874 : 209.0) no description available & (gnl|cdd|67356 : 118.0) no description available & (reliability: 692.0) & (original description: Putative EML4, Description = Protein EMSY-LIKE 4, PFAM = PF03735)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold171_35696-53443' '(at5g13020 : 380.0) Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), ENT (InterPro:IPR005491); BEST Arabidopsis thaliana protein match is: Emsy N Terminus (ENT) domain-containing protein (TAIR:AT2G44440.1); Has 417 Blast hits to 397 proteins in 49 species: Archae - 0; Bacteria - 2; Metazoa - 101; Fungi - 4; Plants - 307; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|39874 : 208.0) no description available & (gnl|cdd|67356 : 120.0) no description available & (reliability: 760.0) & (original description: Putative EML3, Description = Protein EMSY-LIKE 3, PFAM = PF03735)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold171_39445-53520' '(at5g13020 : 372.0) Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), ENT (InterPro:IPR005491); BEST Arabidopsis thaliana protein match is: Emsy N Terminus (ENT) domain-containing protein (TAIR:AT2G44440.1); Has 417 Blast hits to 397 proteins in 49 species: Archae - 0; Bacteria - 2; Metazoa - 101; Fungi - 4; Plants - 307; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|39874 : 212.0) no description available & (gnl|cdd|67356 : 120.0) no description available & (reliability: 744.0) & (original description: Putative rif1, Description = Emsy N Terminus/ plant Tudor-like domains-containing protein isoform 1, PFAM = PF03735)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold220_125615-130960' '(at4g02485 : 240.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G31600.2); Has 487 Blast hits to 486 proteins in 165 species: Archae - 0; Bacteria - 93; Metazoa - 167; Fungi - 38; Plants - 88; Viruses - 3; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 480.0) & (original description: Putative At4g02485, Description = At4g02485, PFAM = PF13532)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold290_42859-58900' '(at2g25320 : 2236.0) TRAF-like family protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT2G25330.1); Has 73652 Blast hits to 40883 proteins in 2342 species: Archae - 900; Bacteria - 9328; Metazoa - 35691; Fungi - 5783; Plants - 4303; Viruses - 204; Other Eukaryotes - 17443 (source: NCBI BLink). & (gnl|cdd|37198 : 119.0) no description available & (gnl|cdd|58100 : 100.0) no description available & (reliability: 4472.0) & (original description: Putative CMS1, Description = CGS1 mRNA stability 1, PFAM = PF00917;PF00917;PF00917)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold299_84452-86351' '(at5g05365 : 83.6) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G19090.3); Has 886 Blast hits to 886 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 9; Plants - 876; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative BnaC09g49960D, Description = BnaC09g49960D protein, PFAM = PF00403)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold515_73448-76886' '(at1g13635 : 160.0) DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT5G57970.2). & (gnl|cdd|86301 : 110.0) no description available & (reliability: 320.0) & (original description: Putative csu92a, Description = DNA-3-methyladenine glycosylase I, PFAM = PF03352)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold555_426-15068' '(at5g05460 : 551.0) Glycosyl hydrolase family 85 ; FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 85 (InterPro:IPR005201), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 85 (TAIR:AT3G11040.1); Has 480 Blast hits to 472 proteins in 209 species: Archae - 0; Bacteria - 262; Metazoa - 108; Fungi - 28; Plants - 47; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|37542 : 343.0) no description available & (gnl|cdd|67272 : 249.0) no description available & (reliability: 1102.0) & (original description: Putative ENGASE1, Description = Cytosolic endo-beta-N-acetylglucosaminidase 1, PFAM = PF03644)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold697_14282-22367' '(at3g45740 : 421.0) hydrolase family protein / HAD-superfamily protein; FUNCTIONS IN: copper ion binding, zinc ion binding; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIA, CECR5 (InterPro:IPR006353), HAD-superfamily hydrolase, subfamily IIA (InterPro:IPR006357); Has 548 Blast hits to 526 proteins in 159 species: Archae - 8; Bacteria - 6; Metazoa - 128; Fungi - 307; Plants - 36; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|36831 : 302.0) no description available & (reliability: 842.0) & (original description: Putative Sb01g038800, Description = Putative uncharacterized protein Sb01g038800, PFAM = PF13344;PF13242)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold817_62033-65958' '(at2g38740 : 330.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G56500.1); Has 17978 Blast hits to 17978 proteins in 2581 species: Archae - 265; Bacteria - 14433; Metazoa - 167; Fungi - 429; Plants - 387; Viruses - 3; Other Eukaryotes - 2294 (source: NCBI BLink). & (gnl|cdd|30982 : 140.0) no description available & (gnl|cdd|38125 : 127.0) no description available & (reliability: 660.0) & (original description: Putative PSEEN3015, Description = Putative hydrolase, haloacid dehalogenase-like family, PFAM = PF13419)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold827_105308-110532' '(at1g07230 : 650.0) non-specific phospholipase C1 (NPC1); FUNCTIONS IN: hydrolase activity, acting on ester bonds; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C2 (TAIR:AT2G26870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67785 : 292.0) no description available & (reliability: 1300.0) & (original description: Putative NPC1, Description = Non-specific phospholipase C1, PFAM = PF04185)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold839_631-7879' '(at2g01070 : 263.0) Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G72480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37779 : 210.0) no description available & (gnl|cdd|87161 : 120.0) no description available & (reliability: 526.0) & (original description: Putative Sb05g020918, Description = Putative uncharacterized protein Sb05g020918, PFAM = PF06814)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold982_91933-96836' '(at3g24730 : 187.0) mRNA splicing factor, thioredoxin-like U5 snRNP; FUNCTIONS IN: catalytic activity; INVOLVED IN: mitosis; LOCATED IN: spliceosomal complex; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), mRNA splicing factor, thioredoxin-like U5 snRNP (InterPro:IPR004123), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: mRNA splicing factor, thioredoxin-like U5 snRNP (TAIR:AT5G08290.1); Has 535 Blast hits to 535 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 213; Fungi - 146; Plants - 109; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|48535 : 160.0) no description available & (gnl|cdd|38624 : 146.0) no description available & (reliability: 374.0) & (original description: Putative TXNL4B, Description = Thioredoxin-like protein 4B, PFAM = PF02966)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold1151_68505-76627' '(at1g16860 : 605.0) Ubiquitin-specific protease family C19-related protein; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: Ubiquitin-specific protease family C19-related protein (TAIR:AT1G78880.1); Has 605 Blast hits to 295 proteins in 85 species: Archae - 0; Bacteria - 22; Metazoa - 26; Fungi - 28; Plants - 169; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 1210.0) & (original description: Putative At1g16860, Description = Uncharacterized membrane protein At1g16860, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold1316_73229-82070' '(at4g31040 : 499.0) CemA-like proton extrusion protein-related; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CemA (InterPro:IPR004282); BEST Arabidopsis thaliana protein match is: CemA-like proton extrusion protein-related (TAIR:ATCG00530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|81000 : 149.0) no description available & (q9tkz2|cema_nepol : 124.0) Chloroplast envelope membrane protein - Nephroselmis olivacea & (reliability: 998.0) & (original description: Putative At4g31040, Description = CemA-like proton extrusion protein-like protein, PFAM = PF03040)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold1375_60266-69237' '(at2g25830 : 327.0) YebC-related; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF28 (InterPro:IPR002876), Integrase, N-terminal zinc-binding domain-like (InterPro:IPR017856); Has 8692 Blast hits to 8692 proteins in 2830 species: Archae - 0; Bacteria - 6166; Metazoa - 76; Fungi - 120; Plants - 47; Viruses - 0; Other Eukaryotes - 2283 (source: NCBI BLink). & (gnl|cdd|38183 : 244.0) no description available & (gnl|cdd|85626 : 220.0) no description available & (reliability: 654.0) & (original description: Putative BnaA04g15140D, Description = BnaA04g15140D protein, PFAM = PF01709)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold1409_19951-29048' '(at3g06880 : 211.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: binding, nucleotide binding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781). & (gnl|cdd|29257 : 95.1) no description available & (q64ha9|spl11_orysa : 80.5) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 422.0) & (original description: Putative PGSC0003DMG400005092, Description = Os01g0229700 protein, PFAM = PF00400;PF04564)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold1463_88968-91717' '(at5g39360 : 425.0) EID1-like 2 (EDL2); BEST Arabidopsis thaliana protein match is: EID1-like 1 (TAIR:AT5G15440.1); Has 126 Blast hits to 118 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 126; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 850.0) & (original description: Putative EDL3, Description = EID1-like F-box protein 3, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold1483_56842-67305' '(at5g01460 : 636.0) LMBR1-like membrane protein; CONTAINS InterPro DOMAIN/s: LMBR1-like membrane protein, conserved region (InterPro:IPR006876); BEST Arabidopsis thaliana protein match is: LMBR1-like membrane protein (TAIR:AT3G08930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86725 : 267.0) no description available & (reliability: 1272.0) & (original description: Putative At3g08930, Description = LIMR family protein At3g08930, PFAM = PF04791)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold1716_9920-22879' '(at5g43560 : 440.0) TRAF-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like superfamily protein (TAIR:AT1G04300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58100 : 115.0) no description available & (reliability: 880.0) & (original description: Putative At5g43560, Description = MATH domain-containing protein At5g43560, PFAM = PF00917)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold1917_1757-9929' '(at5g07980 : 227.0) dentin sialophosphoprotein-related; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07940.2); Has 1336 Blast hits to 783 proteins in 174 species: Archae - 4; Bacteria - 291; Metazoa - 248; Fungi - 128; Plants - 141; Viruses - 0; Other Eukaryotes - 524 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold2386_60756-71078' '(at3g13225 : 168.0) WW domain-containing protein; CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); Has 1723 Blast hits to 1069 proteins in 210 species: Archae - 2; Bacteria - 74; Metazoa - 564; Fungi - 222; Plants - 86; Viruses - 6; Other Eukaryotes - 769 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative PGSC0003DMG400014404, Description = Os06g0298400 protein, PFAM = PF00397;PF00397)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold2461_45102-48728' '(at1g05280 : 461.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT4G15240.1); Has 523 Blast hits to 513 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 61; Fungi - 172; Plants - 273; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|68226 : 344.0) no description available & (gnl|cdd|37457 : 242.0) no description available & (reliability: 922.0) & (original description: Putative BnaA10g03350D, Description = BnaA10g03350D protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold2496_42296-45791' '(at2g04690 : 199.0) Pyridoxamine 5'-phosphate oxidase family protein; FUNCTIONS IN: FMN binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellular repressor of E1A-stimulated genes (CREG) (InterPro:IPR014631), FMN-binding split barrel (InterPro:IPR012349), FMN-binding split barrel, related (InterPro:IPR009002); Has 408 Blast hits to 408 proteins in 115 species: Archae - 0; Bacteria - 83; Metazoa - 160; Fungi - 2; Plants - 80; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (gnl|cdd|38584 : 161.0) no description available & (reliability: 398.0) & (original description: Putative TRIUR3_25605, Description = Protein CREG2, PFAM = PF13883)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold2509_38683-46840' '(at1g29810 : 202.0) Transcriptional coactivator/pterin dehydratase; FUNCTIONS IN: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity, dihydroxy-acid dehydratase activity; INVOLVED IN: tetrahydrobiopterin biosynthetic process; CONTAINS InterPro DOMAIN/s: Transcriptional coactivator/pterin dehydratase (InterPro:IPR001533); BEST Arabidopsis thaliana protein match is: Transcriptional coactivator/pterin dehydratase (TAIR:AT5G51110.1); Has 4058 Blast hits to 4056 proteins in 962 species: Archae - 80; Bacteria - 1882; Metazoa - 205; Fungi - 16; Plants - 92; Viruses - 0; Other Eukaryotes - 1783 (source: NCBI BLink). & (gnl|cdd|48349 : 108.0) no description available & (gnl|cdd|39276 : 97.0) no description available & (reliability: 404.0) & (original description: Putative pdl2, Description = Putative pterin-4-alpha-carbinolamine dehydratase, PFAM = PF01329)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold2714_5218-17748' '(at1g29850 : 90.5) double-stranded DNA-binding family protein; FUNCTIONS IN: double-stranded DNA binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding TFAR19-related protein (InterPro:IPR002836); Has 679 Blast hits to 679 proteins in 318 species: Archae - 256; Bacteria - 0; Metazoa - 134; Fungi - 121; Plants - 56; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|38641 : 88.9) no description available & (reliability: 181.0) & (original description: Putative PDCD5, Description = Programmed cell death protein 5, PFAM = PF01984)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold2765_30330-38068' '(at5g42870 : 340.0) phosphatidic acid phosphohydrolase 2 (PAH2); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: cellular response to phosphate starvation, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LNS2, Lipin/Ned1/Smp2 (InterPro:IPR013209), Lipin, N-terminal conserved region (InterPro:IPR007651); BEST Arabidopsis thaliana protein match is: Lipin family protein (TAIR:AT3G09560.3). & (gnl|cdd|37327 : 333.0) no description available & (gnl|cdd|34687 : 218.0) no description available & (reliability: 680.0) & (original description: Putative LPIN2, Description = LPIN2, PFAM = PF04571;PF08235)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold2918_39272-44225' '(at2g19330 : 360.0) Encodes PIRL6, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.; plant intracellular ras group-related LRR 6 (PIRL6); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 7 (TAIR:AT4G29880.1); Has 63918 Blast hits to 28732 proteins in 1043 species: Archae - 35; Bacteria - 6419; Metazoa - 27911; Fungi - 2141; Plants - 23572; Viruses - 21; Other Eukaryotes - 3819 (source: NCBI BLink). & (gnl|cdd|35752 : 113.0) no description available & (reliability: 720.0) & (original description: Putative PIRL6, Description = Plant intracellular Ras-group-related LRR protein 6, PFAM = PF13855;PF13855)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold2961_14054-24355' '(at1g60670 : 189.0) Protein of unknown function (DUF3755); INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3755 (InterPro:IPR022228); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3755) (TAIR:AT1G10820.2); Has 165 Blast hits to 165 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative DRIF1, Description = At1g10820, PFAM = PF12579)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold3761_39039-44498' '(at5g38900 : 299.0) Thioredoxin superfamily protein; FUNCTIONS IN: protein disulfide oxidoreductase activity; INVOLVED IN: defense response to fungus, incompatible interaction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DSBA oxidoreductase (InterPro:IPR001853), Thioredoxin-like fold (InterPro:IPR012336); Has 2126 Blast hits to 2126 proteins in 739 species: Archae - 17; Bacteria - 1478; Metazoa - 14; Fungi - 129; Plants - 62; Viruses - 0; Other Eukaryotes - 426 (source: NCBI BLink). & (gnl|cdd|48573 : 227.0) no description available & (reliability: 598.0) & (original description: Putative Sb01g015110, Description = Putative uncharacterized protein Sb01g015110, PFAM = PF01323)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold3876_39801-44692' '(q9swb6|pm36_soybn : 303.0) Seed maturation protein PM36 - Glycine max (Soybean) & (at3g16990 : 286.0) Haem oxygenase-like, multi-helical; CONTAINS InterPro DOMAIN/s: Haem oxygenase-like, multi-helical (InterPro:IPR016084), TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C (InterPro:IPR004305); Has 259 Blast hits to 259 proteins in 88 species: Archae - 23; Bacteria - 94; Metazoa - 0; Fungi - 34; Plants - 38; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|86230 : 115.0) no description available & (reliability: 572.0) & (original description: Putative PM36, Description = Formylaminopyrimidine amidohydrolase, PFAM = PF03070)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold3926_29205-37748' '(at3g06880 : 170.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: binding, nucleotide binding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781). & (gnl|cdd|29257 : 93.5) no description available & (q64ha9|spl11_orysa : 80.1) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 340.0) & (original description: Putative CERBERUS, Description = Putative E3 ubiquitin-protein ligase LIN-1, PFAM = PF00400;PF04564)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold4051_63403-69493' '(at4g18060 : 369.0) SH3 domain-containing protein; CONTAINS InterPro DOMAIN/s: Neutrophil cytosol factor 2 p67phox (InterPro:IPR000108), Src homology-3 domain (InterPro:IPR001452); BEST Arabidopsis thaliana protein match is: SH3 domain-containing protein (TAIR:AT4G34660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 738.0) & (original description: Putative SH3P3, Description = SH3 domain-containing protein 3, PFAM = PF14604)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold4273_43942-65809' '(at4g36280 : 602.0) Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: compromised recognition of TCV 1 (TAIR:AT4G36290.1); Has 498 Blast hits to 482 proteins in 78 species: Archae - 0; Bacteria - 36; Metazoa - 219; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|37056 : 342.0) no description available & (reliability: 1202.0) & (original description: Putative MORC1, Description = Protein MICRORCHIDIA 1, PFAM = PF13589)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold4655_27769-32119' '(at4g22360 : 258.0) SWIB complex BAF60b domain-containing protein; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121), SWIB domain (InterPro:IPR019835), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: SWIB complex BAF60b domain-containing protein (TAIR:AT3G19080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37157 : 128.0) no description available & (gnl|cdd|47490 : 111.0) no description available & (reliability: 516.0) & (original description: Putative BnaC07g37300D, Description = BnaC07g37300D protein, PFAM = PF02201;PF02201;PF08766)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold4895_44369-48463' '(at3g06130 : 134.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G19090.3). & (gnl|cdd|36816 : 91.2) no description available & (reliability: 268.0) & (original description: Putative umc1319, Description = Chloroplast-targeted copper chaperone, putative, PFAM = PF00403)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold4978_57963-63940' '(at1g51160 : 297.0) SNARE-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, ER to Golgi vesicle-mediated transport; LOCATED IN: cis-Golgi network; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sybindin-like protein (InterPro:IPR007233), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT5G02280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67705 : 173.0) no description available & (gnl|cdd|38578 : 171.0) no description available & (reliability: 594.0) & (original description: Putative BET5, Description = Component of TRAPP complex, PFAM = PF04099)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold5079_37613-65223' '(at1g77600 : 775.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: binding (TAIR:AT5G47690.2). & (gnl|cdd|36738 : 426.0) no description available & (reliability: 1550.0) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold5192_1-8891' '(at2g04940 : 174.0) scramblase-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Scramblase (InterPro:IPR005552); Has 427 Blast hits to 416 proteins in 142 species: Archae - 0; Bacteria - 29; Metazoa - 228; Fungi - 113; Plants - 38; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|67419 : 104.0) no description available & (gnl|cdd|35840 : 86.5) no description available & (reliability: 348.0) & (original description: Putative At2g04940, Description = Altered inheritance rate of mitochondria protein 25 isoform 1, PFAM = PF03803)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold5305_30378-46111' '(at5g53940 : 203.0) Yippee family putative zinc-binding protein; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: Yippee family putative zinc-binding protein (TAIR:AT2G40110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p59234|yipl_soltu : 164.0) Protein yippee-like - Solanum tuberosum (Potato) & (gnl|cdd|38609 : 157.0) no description available & (gnl|cdd|66871 : 130.0) no description available & (reliability: 406.0) & (original description: Putative ypel, Description = Protein yippee-like, PFAM = PF03226)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold5446_29473-32514' '(at5g15290 : 143.0) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT1G14160.1); Has 635 Blast hits to 635 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 635; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68120 : 121.0) no description available & (reliability: 286.0) & (original description: Putative STG, Description = CASP-like protein, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold6146_29913-33112' '(gnl|cdd|68623 : 335.0) no description available & (at4g34320 : 266.0) Protein of unknown function (DUF677); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, sepal, flower, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT4G34330.1); Has 254 Blast hits to 251 proteins in 19 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 0; Plants - 246; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 532.0) & (original description: Putative PGSC0003DMG400037697, Description = UPF0496 plant-like protein, PFAM = PF05055)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold6536_8077-16369' '(at1g03760 : 175.0) Prefoldin chaperone subunit family protein; FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Prefoldin alpha-like (InterPro:IPR004127), Prefoldin (InterPro:IPR009053); Has 429 Blast hits to 422 proteins in 142 species: Archae - 27; Bacteria - 8; Metazoa - 215; Fungi - 17; Plants - 37; Viruses - 4; Other Eukaryotes - 121 (source: NCBI BLink). & (gnl|cdd|38340 : 81.4) no description available & (reliability: 350.0) & (original description: Putative KK1_033936, Description = RNA polymerase II subunit 5-mediating protein isogeny, PFAM = PF02996)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold6731_41024-52133' '(at2g43650 : 328.0) EMBRYO DEFECTIVE 2777 (EMB2777); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: gene silencing; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Sas10/Utp3/C1D (InterPro:IPR007146), Something about silencing protein 10 (Sas10), C-terminal (InterPro:IPR018972); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28230.2); Has 14657 Blast hits to 10395 proteins in 729 species: Archae - 127; Bacteria - 2247; Metazoa - 4743; Fungi - 2020; Plants - 661; Viruses - 159; Other Eukaryotes - 4700 (source: NCBI BLink). & (gnl|cdd|38328 : 100.0) no description available & (gnl|cdd|87913 : 95.7) no description available & (reliability: 656.0) & (original description: Putative EMB2777, Description = Protein EMBRYO DEFECTIVE 2777, PFAM = PF04000;PF09368)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold6831_1999-6637' '(at3g58830 : 339.0) haloacid dehalogenase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIIA (InterPro:IPR006549), Protein of unknown function DUF2010 (InterPro:IPR019001), HAD-superfamily phosphatase, subfamily IIIA (InterPro:IPR010021); Has 1169 Blast hits to 1165 proteins in 593 species: Archae - 0; Bacteria - 976; Metazoa - 0; Fungi - 84; Plants - 42; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|38172 : 220.0) no description available & (gnl|cdd|87964 : 168.0) no description available & (reliability: 678.0) & (original description: Putative At3g58830, Description = At3g58830, PFAM = PF09419)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold6987_37963-53814' '(at1g69340 : 847.0) appr-1-p processing enzyme family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Appr-1-p processing (InterPro:IPR002589); BEST Arabidopsis thaliana protein match is: appr-1-p processing enzyme family protein (TAIR:AT2G40600.1); Has 3597 Blast hits to 3538 proteins in 1210 species: Archae - 64; Bacteria - 1971; Metazoa - 984; Fungi - 140; Plants - 224; Viruses - 8; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|28845 : 236.0) no description available & (gnl|cdd|37844 : 211.0) no description available & (reliability: 1694.0) & (original description: Putative ymdB, Description = O-acetyl-ADP-ribose deacetylase, PFAM = PF13716;PF01661)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold7123_38361-51390' '(at1g20970 : 256.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: guard cell, cultured cell; BEST Arabidopsis thaliana protein match is: proton pump interactor 1 (TAIR:AT4G27500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 512.0) & (original description: Putative At1g20970, Description = BnaA06g14790D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold7490_29616-35764' '(at4g23895 : 224.0) Pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: nucleoside diphosphate kinase activity, ATP binding; INVOLVED IN: UTP biosynthetic process, GTP biosynthetic process, CTP biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Nucleoside diphosphate kinase, core (InterPro:IPR001564), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Nucleoside diphosphate kinase family protein (TAIR:AT4G23900.1). & (reliability: 448.0) & (original description: Putative BnaC03g62070D, Description = BnaC03g62070D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold7533_37853-42921' '(at4g27460 : 257.0) Cystathionine beta-synthase (CBS) family protein; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein (TAIR:AT5G53750.1); Has 145 Blast hits to 145 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 514.0) & (original description: Putative CBSX5, Description = CBS domain CBSX5-like protein, PFAM = PF00571)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold8338_35857-39021' '(at4g01410 : 163.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: NDR1/HIN1-like 1 (TAIR:AT3G11660.1); Has 938 Blast hits to 938 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 938; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 118.0) no description available & (reliability: 326.0) & (original description: Putative At4g01410, Description = At4g01410, PFAM = PF03168)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold8676_755-10107' '(at3g16230 : 293.0) Predicted eukaryotic LigT; FUNCTIONS IN: RNA binding, catalytic activity; INVOLVED IN: RNA metabolic process, regulation of transcription; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088), Predicted eukaryotic LigT (InterPro:IPR009210), RNA ligase/cyclic nucleotide phosphodiesterase (InterPro:IPR009097), Protein kinase A anchor protein, nuclear localisation signal domain (InterPro:IPR019510); BEST Arabidopsis thaliana protein match is: Predicted eukaryotic LigT (TAIR:AT3G16220.1). & (gnl|cdd|38025 : 191.0) no description available & (reliability: 586.0) & (original description: Putative At3g16230, Description = AKAP7 2'5' RNA ligase-like domain protein, PFAM = PF10469)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold8761_29848-41621' '(at1g22930 : 794.0) T-complex protein 11; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: T-complex 11 (InterPro:IPR008862); BEST Arabidopsis thaliana protein match is: T-complex protein 11 (TAIR:AT4G09150.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37192 : 261.0) no description available & (gnl|cdd|69326 : 215.0) no description available & (reliability: 1588.0) & (original description: Putative Sb06g017340, Description = Putative uncharacterized protein Sb06g017340, PFAM = PF05794)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold8935_46839-51229' '(at5g18590 : 250.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 4 (TAIR:AT3G05420.1); Has 9365 Blast hits to 4668 proteins in 321 species: Archae - 14; Bacteria - 334; Metazoa - 3669; Fungi - 969; Plants - 2222; Viruses - 6; Other Eukaryotes - 2151 (source: NCBI BLink). & (gnl|cdd|35600 : 83.7) no description available & (reliability: 500.0) & (original description: Putative At5g18590, Description = Acyl-CoA-binding domain-containing protein 4, PFAM = PF07646;PF01344)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold8991_22082-27923' '(at1g63980 : 268.0) D111/G-patch domain-containing protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D111/G-patch (InterPro:IPR000467); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38020 : 105.0) no description available & (reliability: 536.0) & (original description: Putative Sb01g048840, Description = Putative uncharacterized protein Sb01g048840, PFAM = PF01585)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold9141_35515-40832' '(at5g12040 : 355.0) Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein; FUNCTIONS IN: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, zinc ion binding; INVOLVED IN: nitrogen compound metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010); BEST Arabidopsis thaliana protein match is: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein (TAIR:AT4G08790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36024 : 244.0) no description available & (gnl|cdd|30737 : 199.0) no description available & (q3hvn1|agub_soltu : 80.9) N-carbamoylputrescine amidase (EC 3.5.1.53) - Solanum tuberosum (Potato) & (reliability: 710.0) & (original description: Putative nit2, Description = Omega-amidase NIT2, PFAM = PF00795)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold9383_3488-7313' '(at5g41040 : 644.0) Encodes a feruloyl-CoA transferase required for suberin synthesis. Has feruloyl-CoA-dependent feruloyl transferase activity towards substrates with a primary alcohol.; HXXXD-type acyl-transferase family protein; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G63560.1); Has 2973 Blast hits to 2952 proteins in 200 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 233; Plants - 2730; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|66174 : 328.0) no description available & (o24645|hcbt1_diaca : 217.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1288.0) & (original description: Putative HHT1, Description = Omega-hydroxypalmitate O-feruloyl transferase, PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold9432_39173-45588' '(at2g41050 : 187.0) PQ-loop repeat family protein / transmembrane family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cystinosin/ERS1p repeat (InterPro:IPR006603); BEST Arabidopsis thaliana protein match is: PQ-loop repeat family protein / transmembrane family protein (TAIR:AT4G36850.1); Has 930 Blast hits to 673 proteins in 160 species: Archae - 0; Bacteria - 0; Metazoa - 218; Fungi - 545; Plants - 89; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (gnl|cdd|38124 : 86.6) no description available & (reliability: 374.0) & (original description: Putative At2g41050, Description = Putative ovule protein, PFAM = PF04193)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold9475_39586-64931' '(at1g60995 : 763.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Membralin (InterPro:IPR019144); Has 172 Blast hits to 170 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|37303 : 349.0) no description available & (reliability: 1526.0) & (original description: Putative At1g60995, Description = Putative uncharacterized protein At1g61000/T7P1_14, PFAM = PF09746)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold10133_148-9396' '(at2g15240 : 335.0) UNC-50 family protein; CONTAINS InterPro DOMAIN/s: UNC-50 (InterPro:IPR007881); Has 331 Blast hits to 331 proteins in 162 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 93; Plants - 47; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|38222 : 260.0) no description available & (gnl|cdd|68776 : 251.0) no description available & (reliability: 670.0) & (original description: Putative gpm679, Description = UNC-50 family protein, PFAM = PF05216)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold10202_73010-86037' '(at5g19820 : 1631.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37382 : 1086.0) no description available & (reliability: 3262.0) & (original description: Putative emb2734, Description = Protein EMBRYO DEFECTIVE 2734, PFAM = PF02985;PF13646)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold10217_38834-44167' '(at1g71950 : 91.3) Proteinase inhibitor, propeptide; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: negative regulation of catalytic activity; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor, propeptide (InterPro:IPR009020), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8, subtilisin-related (InterPro:IPR015500); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G11940.1); Has 894 Blast hits to 886 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 894; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative At1g71950, Description = At1g71950, PFAM = PF05922)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold10658_21305-29746' '(at4g02110 : 325.0) transcription coactivators; FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein (TAIR:AT1G67180.1); Has 6090 Blast hits to 4661 proteins in 497 species: Archae - 12; Bacteria - 945; Metazoa - 2581; Fungi - 684; Plants - 424; Viruses - 13; Other Eukaryotes - 1431 (source: NCBI BLink). & (gnl|cdd|37140 : 86.2) no description available & (reliability: 650.0) & (original description: Putative At4g02110, Description = Putative BRCT domain-containing protein-like, PFAM = PF00533;PF12738)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold10845_38861-47574' '(at3g29760 : 173.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT4G26190.1); Has 1237 Blast hits to 872 proteins in 256 species: Archae - 8; Bacteria - 257; Metazoa - 241; Fungi - 123; Plants - 151; Viruses - 82; Other Eukaryotes - 375 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative At3g29760, Description = Haloacid dehalogenase-like hydrolase superfamily protein, putative isoform 1, PFAM = PF03031)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold10958_1515-6231' '(at2g01190 : 230.0) Octicosapeptide/Phox/Bem1p family protein; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT3G18230.1); Has 5347 Blast hits to 4615 proteins in 344 species: Archae - 4; Bacteria - 100; Metazoa - 2308; Fungi - 1293; Plants - 931; Viruses - 29; Other Eukaryotes - 682 (source: NCBI BLink). & (gnl|cdd|47941 : 80.7) no description available & (reliability: 460.0) & (original description: Putative At2g01190, Description = Expressed protein, PFAM = PF00564)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold11454_40879-46354' '(at2g03780 : 323.0) Translin family protein; FUNCTIONS IN: sequence-specific DNA binding, DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translin, C-terminal (InterPro:IPR016069), Translin (InterPro:IPR002848), Translin, N-terminal (InterPro:IPR016068); Has 561 Blast hits to 561 proteins in 195 species: Archae - 92; Bacteria - 2; Metazoa - 209; Fungi - 153; Plants - 36; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|38276 : 255.0) no description available & (gnl|cdd|85824 : 158.0) no description available & (reliability: 646.0) & (original description: Putative TRAX, Description = Translin-associated factor X, PFAM = PF01997)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold11493_17908-43546' '(at3g33530 : 1586.0) Transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT2G26610.1). & (gnl|cdd|37123 : 862.0) no description available & (reliability: 3172.0) & (original description: Putative pco087232, Description = Bromodomain and WD repeat-containing protein 2, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold11629_1773-5083' '(gnl|cdd|66174 : 248.0) no description available & (at3g26040 : 220.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 2415 Blast hits to 2403 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 2353; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative PGSC0003DMG400023480, Description = Acyltransferase 1, PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold11870_36258-45516' '(at5g07980 : 192.0) dentin sialophosphoprotein-related; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07940.2); Has 1336 Blast hits to 783 proteins in 174 species: Archae - 4; Bacteria - 291; Metazoa - 248; Fungi - 128; Plants - 141; Viruses - 0; Other Eukaryotes - 524 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold11955_16725-27518' '(at3g60260 : 333.0) ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT2G44770.1); Has 836 Blast hits to 836 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 495; Fungi - 36; Plants - 182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|38208 : 221.0) no description available & (gnl|cdd|68305 : 166.0) no description available & (reliability: 666.0) & (original description: Putative MTR_3g085460, Description = ELMO/CED-12 family protein, PFAM = PF04727)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold12183_13025-28200' '(at1g80810 : 135.0) Tudor/PWWP/MBT superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1); Has 103396 Blast hits to 54411 proteins in 2510 species: Archae - 599; Bacteria - 9234; Metazoa - 41155; Fungi - 13255; Plants - 5790; Viruses - 1058; Other Eukaryotes - 32305 (source: NCBI BLink). & (gnl|cdd|36738 : 106.0) no description available & (reliability: 270.0) & (original description: Putative At1g15940, Description = Putative ovule protein, PFAM = PF05278)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold12305_24233-36420' '(at1g33980 : 249.0) Involved in mRNA surveillance, detects exported mRNAs with truncated open reading frames and initiates nonsense-mediated mRNA decay (NMD); UPF3; FUNCTIONS IN: nucleotide binding; INVOLVED IN: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Regulator of nonsense-mediated decay, UPF3 (InterPro:IPR005120); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67104 : 150.0) no description available & (gnl|cdd|36509 : 89.7) no description available & (reliability: 498.0) & (original description: Putative Sb06g017380, Description = Putative uncharacterized protein Sb06g017380, PFAM = PF03467)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold12671_22336-28278' '(at2g16595 : 234.0) Translocon-associated protein (TRAP), alpha subunit; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translocon-associated protein (TRAP), alpha subunit (InterPro:IPR005595); BEST Arabidopsis thaliana protein match is: Translocon-associated protein (TRAP), alpha subunit (TAIR:AT2G21160.1); Has 245 Blast hits to 245 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 29; Plants - 60; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|36844 : 213.0) no description available & (gnl|cdd|67507 : 85.1) no description available & (reliability: 468.0) & (original description: Putative tap1, Description = Translocon-associated protein (TRAP), alpha subunit, PFAM = PF03896)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold13151_13580-18634' '(at3g15000 : 221.0) cobalt ion binding; FUNCTIONS IN: cobalt ion binding; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT3G06790.2); Has 57621 Blast hits to 29750 proteins in 1231 species: Archae - 14; Bacteria - 7130; Metazoa - 26978; Fungi - 8402; Plants - 8184; Viruses - 944; Other Eukaryotes - 5969 (source: NCBI BLink). & (q38732|dag_antma : 116.0) DAG protein, chloroplast precursor - Antirrhinum majus (Garden snapdragon) & (reliability: 442.0) & (original description: Putative DAG, Description = Plastid developmental protein DAG, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold13186_9250-13027' '(at2g40410 : 439.0) Staphylococcal nuclease homologue; FUNCTIONS IN: hydrolase activity, acting on ester bonds, nuclease activity, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Staphylococcal nuclease (SNase-like) (InterPro:IPR006021), Staphylococcal nuclease (SNase-like), OB-fold (InterPro:IPR016071); BEST Arabidopsis thaliana protein match is: Ca-2+ dependent nuclease (TAIR:AT3G56170.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84867 : 121.0) no description available & (reliability: 878.0) & (original description: Putative CAN2, Description = Staphylococcal-like nuclease CAN2, PFAM = PF00565)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold13807_31077-36160' '(at2g01190 : 180.0) Octicosapeptide/Phox/Bem1p family protein; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT3G18230.1); Has 5347 Blast hits to 4615 proteins in 344 species: Archae - 4; Bacteria - 100; Metazoa - 2308; Fungi - 1293; Plants - 931; Viruses - 29; Other Eukaryotes - 682 (source: NCBI BLink). & (gnl|cdd|47941 : 83.4) no description available & (reliability: 360.0) & (original description: Putative At1g04700, Description = Octicosapeptide/Phox/Bem1p domain-containing protein kinase, PFAM = PF00564)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold14022_17-4493' '(at3g02700 : 308.0) NC domain-containing protein-related; CONTAINS InterPro DOMAIN/s: NC (InterPro:IPR007053); BEST Arabidopsis thaliana protein match is: NC domain-containing protein-related (TAIR:AT5G16360.1); Has 186 Blast hits to 185 proteins in 40 species: Archae - 0; Bacteria - 31; Metazoa - 10; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 616.0) & (original description: Putative At5g06370, Description = AT5g06370/MHF15_11, PFAM = PF04970)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold14345_13737-16137' '(at3g19508 : 103.0) unknown protein; LOCATED IN: mitochondrion; Has 34 Blast hits to 34 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative , Description = , PFAM = PF05347)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold14838_24782-32270' '(at3g16260 : 979.0) Encodes a tRNase Z.; tRNAse Z4 (TRZ4); FUNCTIONS IN: 3'-tRNA processing endoribonuclease activity, catalytic activity; INVOLVED IN: tRNA 3'-end processing, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease Z (InterPro:IPR013471); BEST Arabidopsis thaliana protein match is: tRNAse Z3 (TAIR:AT1G52160.1); Has 6299 Blast hits to 4396 proteins in 1654 species: Archae - 442; Bacteria - 4351; Metazoa - 254; Fungi - 243; Plants - 108; Viruses - 0; Other Eukaryotes - 901 (source: NCBI BLink). & (gnl|cdd|37332 : 690.0) no description available & (gnl|cdd|31427 : 182.0) no description available & (reliability: 1958.0) & (original description: Putative TRZ4, Description = tRNAse Z4, PFAM = PF13691)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold14982_35990-40108' '(at2g37730 : 553.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT3G11420.1); Has 511 Blast hits to 500 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 144; Plants - 279; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|68226 : 288.0) no description available & (gnl|cdd|37457 : 239.0) no description available & (reliability: 1106.0) & (original description: Putative GT31C5, Description = Transferring glycosyl group transferase, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold15083_25663-39944' '(at5g11040 : 1743.0) TRS120; CONTAINS InterPro DOMAIN/s: Transport protein Trs120 (InterPro:IPR013935); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37164 : 798.0) no description available & (gnl|cdd|87580 : 149.0) no description available & (reliability: 3486.0) & (original description: Putative TRS120, Description = Trafficking protein particle complex II-specific subunit 120 homolog, PFAM = PF08626;PF08626;PF08626)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold15145_19184-22533' '(gnl|cdd|66174 : 246.0) no description available & (at3g26040 : 227.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 2415 Blast hits to 2403 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 2353; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (o24645|hcbt1_diaca : 80.5) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 454.0) & (original description: Putative PGSC0003DMG400007171, Description = 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative, PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold15321_344-12126' '(at2g22530 : 699.0) Alkaline-phosphatase-like family protein; FUNCTIONS IN: transferase activity, catalytic activity; INVOLVED IN: metabolic process, phospholipid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase (InterPro:IPR002591), Alkaline-phosphatase-like, core domain (InterPro:IPR017850); BEST Arabidopsis thaliana protein match is: Alkaline-phosphatase-like family protein (TAIR:AT5G17250.1); Has 1578 Blast hits to 1403 proteins in 374 species: Archae - 4; Bacteria - 326; Metazoa - 515; Fungi - 456; Plants - 91; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink). & (gnl|cdd|37336 : 410.0) no description available & (reliability: 1398.0) & (original description: Putative PIGG, Description = PIGG, PFAM = PF01663)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold15423_1-19999' '(at1g22860 : 905.0) Vacuolar sorting protein 39; FUNCTIONS IN: small GTPase regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Citron-like (InterPro:IPR001180), Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1 (InterPro:IPR019452), Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2 (InterPro:IPR019453); Has 401 Blast hits to 372 proteins in 133 species: Archae - 0; Bacteria - 2; Metazoa - 168; Fungi - 105; Plants - 74; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|37274 : 415.0) no description available & (reliability: 1810.0) & (original description: Putative BnaA09g30320D, Description = Vacuolar sorting protein 39 domain protein, PFAM = PF10366;PF00637;PF10367;PF00780)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold16287_4630-11098' '(at1g59650 : 397.0) Encodes CW14.; CW14; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT1G10410.1); Has 261 Blast hits to 261 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|70520 : 256.0) no description available & (reliability: 794.0) & (original description: Putative CW14, Description = CW14 protein, PFAM = PF07059)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold16392_1-8108' '(at3g45740 : 471.0) hydrolase family protein / HAD-superfamily protein; FUNCTIONS IN: copper ion binding, zinc ion binding; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIA, CECR5 (InterPro:IPR006353), HAD-superfamily hydrolase, subfamily IIA (InterPro:IPR006357); Has 548 Blast hits to 526 proteins in 159 species: Archae - 8; Bacteria - 6; Metazoa - 128; Fungi - 307; Plants - 36; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|36831 : 339.0) no description available & (gnl|cdd|30992 : 86.8) no description available & (reliability: 942.0) & (original description: Putative Sb01g038800, Description = Putative uncharacterized protein Sb01g038800, PFAM = PF13344;PF13242)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold16470_2233-34939' '(at3g02700 : 182.0) NC domain-containing protein-related; CONTAINS InterPro DOMAIN/s: NC (InterPro:IPR007053); BEST Arabidopsis thaliana protein match is: NC domain-containing protein-related (TAIR:AT5G16360.1); Has 186 Blast hits to 185 proteins in 40 species: Archae - 0; Bacteria - 31; Metazoa - 10; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative At5g06370, Description = Lecithin retinol acyltransferase, PFAM = PF04970)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold16762_6584-21095' '(at2g04560 : 402.0) transferases, transferring glycosyl groups; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid A biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 19 (InterPro:IPR003835); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31106 : 235.0) no description available & (reliability: 804.0) & (original description: Putative lpxB, Description = Lipid-A-disaccharide synthase, PFAM = PF02684)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold16762_15373-21228' '(at2g04560 : 518.0) transferases, transferring glycosyl groups; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid A biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 19 (InterPro:IPR003835); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80456 : 301.0) no description available & (reliability: 1036.0) & (original description: Putative LPXB, Description = Probable lipid-A-disaccharide synthase, mitochondrial, PFAM = PF02684)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold16932_27627-35250' '(at1g03620 : 350.0) ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT3G03610.1); Has 828 Blast hits to 828 proteins in 138 species: Archae - 0; Bacteria - 0; Metazoa - 491; Fungi - 41; Plants - 178; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|38208 : 257.0) no description available & (gnl|cdd|68305 : 209.0) no description available & (reliability: 700.0) & (original description: Putative MTR_3g085460, Description = ELMO/CED-12 family protein, PFAM = PF04727)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold17336_32947-36840' '(at5g53390 : 290.0) O-acyltransferase (WSD1-like) family protein; CONTAINS InterPro DOMAIN/s: O-acyltransferase, WSD1, C-terminal (InterPro:IPR009721), O-acyltransferase, WSD1, N-terminal (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT2G38995.2); Has 1220 Blast hits to 1207 proteins in 180 species: Archae - 4; Bacteria - 957; Metazoa - 16; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 522.0) & (original description: Putative FOP, Description = O-acyltransferase (WSD1-like) family protein, PFAM = PF03007)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold17679_17722-31369' '(at3g15410 : 621.0) Leucine-rich repeat (LRR) family protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT3G24240.1). & (gnl|cdd|35693 : 480.0) no description available & (reliability: 1242.0) & (original description: Putative IRL6, Description = Leucine-rich repeat-containing protein 40, PFAM = PF13306;PF13855;PF13855;PF13855)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold17724_7736-16787' '(at4g34280 : 698.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: U2A'/phosphoprotein 32 family A, C-terminal (InterPro:IPR003603), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G61210.2); Has 5718 Blast hits to 4596 proteins in 341 species: Archae - 5; Bacteria - 811; Metazoa - 2365; Fungi - 1046; Plants - 644; Viruses - 0; Other Eukaryotes - 847 (source: NCBI BLink). & (reliability: 1396.0) & (original description: Putative At4g34280, Description = At4g34280, PFAM = PF00400)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold18300_14447-26828' '(at2g05755 : 377.0) Nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); Has 4644 Blast hits to 4643 proteins in 977 species: Archae - 33; Bacteria - 1970; Metazoa - 235; Fungi - 138; Plants - 28; Viruses - 0; Other Eukaryotes - 2240 (source: NCBI BLink). & (gnl|cdd|39710 : 97.3) no description available & (reliability: 754.0) & (original description: Putative At2g05755, Description = At2g05755, PFAM = PF00892)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold18731_1-8974' '(at1g61000 : 331.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Kinetochore protein Nuf2 (InterPro:IPR005549); Has 50972 Blast hits to 29793 proteins in 2070 species: Archae - 902; Bacteria - 7404; Metazoa - 23628; Fungi - 4156; Plants - 2312; Viruses - 158; Other Eukaryotes - 12412 (source: NCBI BLink). & (gnl|cdd|39639 : 157.0) no description available & (reliability: 662.0) & (original description: Putative At1g61000, Description = Kinetochore Nuf2-like protein, PFAM = PF03800)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold18790_23287-27409' '(at1g17070 : 807.0) GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tuftelin interacting protein N-terminal (InterPro:IPR022159), D111/G-patch (InterPro:IPR000467); BEST Arabidopsis thaliana protein match is: GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain (TAIR:AT2G42330.2); Has 1264 Blast hits to 1232 proteins in 250 species: Archae - 2; Bacteria - 6; Metazoa - 735; Fungi - 146; Plants - 190; Viruses - 1; Other Eukaryotes - 184 (source: NCBI BLink). & (gnl|cdd|37395 : 580.0) no description available & (gnl|cdd|72121 : 275.0) no description available & (reliability: 1614.0) & (original description: Putative STIPL1, Description = Septin and tuftelin-interacting protein 1 homolog 1, PFAM = PF01585;PF07842;PF12457)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold18822_1-15486' '(at5g42770 : 158.0) Maf-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Maf-like protein (InterPro:IPR003697); BEST Arabidopsis thaliana protein match is: Maf-like protein (TAIR:AT5G66550.1). & (gnl|cdd|36722 : 107.0) no description available & (reliability: 316.0) & (original description: Putative At5g42770, Description = Putative uncharacterized protein At5g42770, PFAM = PF02545)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold18835_31923-34988' '(gnl|cdd|68226 : 230.0) no description available & (at2g37730 : 228.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT3G11420.1); Has 511 Blast hits to 500 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 144; Plants - 279; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative AT2G37730, Description = Transferring glycosyl group transferase, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold18886_132-28495' '(at3g04490 : 632.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38092.1); Has 75 Blast hits to 64 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 36; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|39741 : 328.0) no description available & (reliability: 1264.0) & (original description: Putative At3g04490, Description = Os10g0477000 protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold19143_14765-20419' '(at2g35450 : 455.0) catalytics;hydrolases; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amidohydrolase 2 (InterPro:IPR006992); Has 1373 Blast hits to 1373 proteins in 381 species: Archae - 4; Bacteria - 1000; Metazoa - 6; Fungi - 6; Plants - 45; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|86744 : 106.0) no description available & (reliability: 910.0) & (original description: Putative TCM_008588, Description = Catalytics,hydrolases isoform 1, PFAM = PF04909)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold19163_31385-34057' '(at4g27860 : 88.2) vacuolar iron transporter (VIT) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: embryo, hypocotyl, root, pedicel, leaf; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217), Cytokine, IL-1-like (InterPro:IPR008996); BEST Arabidopsis thaliana protein match is: Vacuolar iron transporter (VIT) family protein (TAIR:AT4G27870.1). & (reliability: 176.4) & (original description: Putative PGSC0003DMG400000570, Description = Vacuolar iron transporter (VIT) family protein, PFAM = PF01988)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold19171_17405-21665' '(at1g01225 : 335.0) NC domain-containing protein-related; CONTAINS InterPro DOMAIN/s: NC (InterPro:IPR007053); BEST Arabidopsis thaliana protein match is: NC domain-containing protein-related (TAIR:AT4G00905.1); Has 173 Blast hits to 172 proteins in 34 species: Archae - 0; Bacteria - 24; Metazoa - 5; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 670.0) & (original description: Putative BnaCnng08590D, Description = BnaCnng08590D protein, PFAM = PF04970)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold19360_1-14633' '(at2g28320 : 1081.0) Pleckstrin homology (PH) and lipid-binding START domains-containing protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769), Pleckstrin homology-type (InterPro:IPR011993), Lipid-binding START (InterPro:IPR002913), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Pleckstrin homology (PH) and lipid-binding START domains-containing protein (TAIR:AT3G54800.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70520 : 266.0) no description available & (reliability: 2162.0) & (original description: Putative At2g28320, Description = Pleckstrin homology (PH) and lipid-binding START domain-containing protein, PFAM = PF07059;PF01852;PF00169)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold19443_17416-24725' '(at1g27760 : 205.0) Encodes a protein with similarity to human interferon-related developmental regulator (IFRD)that is involved in salt tolerance. Loss of function mutations are hypersensitive to salt stress and have reduced fertility. SAT32 is found in the cytoplasm but appears to translocate to the nucleus when plants are subject to salt stress.; SALT-TOLERANCE 32 (SAT32); FUNCTIONS IN: binding; INVOLVED IN: response to salt stress; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Interferon-related developmental regulator, N-terminal (InterPro:IPR007701), Interferon-related developmental regulator, C-terminal (InterPro:IPR006921), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68573 : 104.0) no description available & (reliability: 410.0) & (original description: Putative , Description = , PFAM = PF05004)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold20464_1-4233' '(at1g72620 : 291.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G17430.1); Has 6611 Blast hits to 6609 proteins in 1295 species: Archae - 83; Bacteria - 4976; Metazoa - 140; Fungi - 18; Plants - 334; Viruses - 0; Other Eukaryotes - 1060 (source: NCBI BLink). & (gnl|cdd|36667 : 156.0) no description available & (gnl|cdd|30941 : 95.5) no description available & (reliability: 582.0) & (original description: Putative BnaA08g23110D, Description = BnaA08g23110D protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold20871_222-8366' '(at1g61670 : 689.0) Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G10980.1); Has 653 Blast hits to 651 proteins in 175 species: Archae - 0; Bacteria - 2; Metazoa - 278; Fungi - 148; Plants - 158; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|37779 : 517.0) no description available & (gnl|cdd|87161 : 349.0) no description available & (reliability: 1378.0) & (original description: Putative Sb01g036190, Description = Putative uncharacterized protein Sb01g036190, PFAM = PF06814)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold21184_137-16626' '(at5g45170 : 384.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT3G48420.1); Has 352 Blast hits to 346 proteins in 109 species: Archae - 0; Bacteria - 170; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 768.0) & (original description: Putative At5g45170, Description = At5g45170, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold21757_1780-6396' '(at1g63300 : 280.0) Myosin heavy chain-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: Myosin heavy chain-related protein (TAIR:AT5G41140.1); Has 241668 Blast hits to 113961 proteins in 3668 species: Archae - 3215; Bacteria - 50568; Metazoa - 96634; Fungi - 19056; Plants - 12907; Viruses - 1139; Other Eukaryotes - 58149 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative SIP24, Description = EEIG1/EHBP1 N-terminal domain-containing protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold22030_3786-9371' '(at3g62860 : 473.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G47630.1); Has 2895 Blast hits to 2893 proteins in 1018 species: Archae - 30; Bacteria - 1827; Metazoa - 110; Fungi - 120; Plants - 454; Viruses - 49; Other Eukaryotes - 305 (source: NCBI BLink). & (gnl|cdd|36668 : 376.0) no description available & (gnl|cdd|32448 : 111.0) no description available & (reliability: 946.0) & (original description: Putative At3g62860, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold22077_28068-31589' '(at3g55390 : 179.0) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G38480.1); Has 361 Blast hits to 361 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 361; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68120 : 81.6) no description available & (reliability: 358.0) & (original description: Putative POPTRDRAFT_822486, Description = CASP-like protein 4C2, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold22114_21843-31544' '(at5g50310 : 449.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G07720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36444 : 401.0) no description available & (reliability: 898.0) & (original description: Putative KLHDC4, Description = Chromosome undetermined SCAF7063, whole genome shotgun sequence, PFAM = PF13415;PF13415;PF13415)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold22912_18216-21317' '(at4g23930 : 128.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT1G64450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative BnaA09g12240D, Description = BnaA09g12240D protein, PFAM = PF03168)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold22921_20867-26194' '(at3g56840 : 510.0) FAD-dependent oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076); Has 4748 Blast hits to 4741 proteins in 1463 species: Archae - 76; Bacteria - 3210; Metazoa - 112; Fungi - 136; Plants - 47; Viruses - 1; Other Eukaryotes - 1166 (source: NCBI BLink). & (gnl|cdd|37876 : 385.0) no description available & (gnl|cdd|30924 : 285.0) no description available & (reliability: 1020.0) & (original description: Putative lhgO, Description = L-2-hydroxyglutarate oxidase LhgO, PFAM = PF01266)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold23135_9171-24899' '(at2g07360 : 681.0) SH3 domain-containing protein; FUNCTIONS IN: binding; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Src homology-3 domain (InterPro:IPR001452), Armadillo-type fold (InterPro:IPR016024). & (reliability: 1362.0) & (original description: Putative At2g07370, Description = Putative uncharacterized protein At2g07370, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold23159_101-25291' '(at1g02145 : 632.0) homolog of asparagine-linked glycosylation 12 (ALG12); FUNCTIONS IN: alpha-1,6-mannosyltransferase activity; INVOLVED IN: ER-associated protein catabolic process, protein amino acid terminal N-glycosylation; LOCATED IN: intrinsic to endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: Alg9-like mannosyltransferase (InterPro:IPR005599); BEST Arabidopsis thaliana protein match is: Alg9-like mannosyltransferase family (TAIR:AT1G16900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37727 : 359.0) no description available & (gnl|cdd|86471 : 108.0) no description available & (reliability: 1264.0) & (original description: Putative ALG12, Description = Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase, PFAM = PF03901;PF03901)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold23166_12382-28946' '(at1g80810 : 161.0) Tudor/PWWP/MBT superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1); Has 103396 Blast hits to 54411 proteins in 2510 species: Archae - 599; Bacteria - 9234; Metazoa - 41155; Fungi - 13255; Plants - 5790; Viruses - 1058; Other Eukaryotes - 32305 (source: NCBI BLink). & (gnl|cdd|36738 : 123.0) no description available & (reliability: 322.0) & (original description: Putative At1g15940, Description = Tudor/PWWP/MBT superfamily protein, PFAM = PF05278)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold24010_5682-8570' '(at3g08640 : 351.0) Protein of unknown function (DUF3411); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3411) (TAIR:AT3G08630.1); Has 11715 Blast hits to 4977 proteins in 490 species: Archae - 4; Bacteria - 2620; Metazoa - 4563; Fungi - 550; Plants - 2459; Viruses - 100; Other Eukaryotes - 1419 (source: NCBI BLink). & (reliability: 702.0) & (original description: Putative Sb06g031280, Description = Putative uncharacterized protein Sb06g031280, PFAM = PF11891)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold24018_1-17509' '(at2g39340 : 704.0) SAC3/GANP/Nin1/mts3/eIF-3 p25 family; CONTAINS InterPro DOMAIN/s: SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37072 : 363.0) no description available & (gnl|cdd|67037 : 162.0) no description available & (reliability: 1408.0) & (original description: Putative SAC3A, Description = SAC3 family protein A, PFAM = PF03399)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold24060_17141-29396' '(at5g24710 : 1718.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 53337 Blast hits to 28879 proteins in 1972 species: Archae - 196; Bacteria - 12524; Metazoa - 15998; Fungi - 8175; Plants - 2336; Viruses - 1195; Other Eukaryotes - 12913 (source: NCBI BLink). & (reliability: 3436.0) & (original description: Putative At5g24710, Description = WD40 domain-containing protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold24301_6871-15398' '(gnl|cdd|36622 : 564.0) no description available & (at3g09080 : 467.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 14743 Blast hits to 9426 proteins in 454 species: Archae - 42; Bacteria - 3876; Metazoa - 4498; Fungi - 2945; Plants - 1499; Viruses - 0; Other Eukaryotes - 1883 (source: NCBI BLink). & (gnl|cdd|29257 : 98.5) no description available & (reliability: 934.0) & (original description: Putative BnaAnng24510D, Description = BnaAnng24510D protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold24420_22666-29486' '(at3g07170 : 102.0) Sterile alpha motif (SAM) domain-containing protein; CONTAINS InterPro DOMAIN/s: Sterile alpha motif (InterPro:IPR001660), Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 1 (InterPro:IPR021129); BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT5G48680.1); Has 516 Blast hits to 515 proteins in 77 species: Archae - 0; Bacteria - 10; Metazoa - 341; Fungi - 2; Plants - 148; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative RCOM_1719220, Description = Transferase, transferring glycosyl groups, putative, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold25093_748-5288' '(at3g26780 : 461.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: N-terminal protein myristoylation, metabolic process; LOCATED IN: cytosol, mitochondrion; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Uncharacterised conserved protein UCP036920, phosphoglycerate mutase, plant X4/Y4 (InterPro:IPR017070); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G12850.1); Has 3099 Blast hits to 3054 proteins in 1059 species: Archae - 8; Bacteria - 2226; Metazoa - 233; Fungi - 43; Plants - 144; Viruses - 0; Other Eukaryotes - 445 (source: NCBI BLink). & (gnl|cdd|35455 : 225.0) no description available & (gnl|cdd|84677 : 80.6) no description available & (reliability: 922.0) & (original description: Putative XY4, Description = Putative fructose-2,6-bisphosphatase, PFAM = PF00300)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold26228_23667-27896' '(at1g15290 : 285.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G28080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37050 : 90.8) no description available & (reliability: 570.0) & (original description: Putative TSS, Description = Eukaryotic translation initiation factor 3 subunit, putative, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold26230_1791-7993' '(at2g36290 : 416.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G74300.1); Has 970 Blast hits to 968 proteins in 224 species: Archae - 20; Bacteria - 476; Metazoa - 0; Fungi - 77; Plants - 313; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (reliability: 832.0) & (original description: Putative At2g36290, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold26230_1875-6700' '(at2g36290 : 263.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G74300.1); Has 970 Blast hits to 968 proteins in 224 species: Archae - 20; Bacteria - 476; Metazoa - 0; Fungi - 77; Plants - 313; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative umc2763, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold26513_8965-26380' '(at2g39340 : 672.0) SAC3/GANP/Nin1/mts3/eIF-3 p25 family; CONTAINS InterPro DOMAIN/s: SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37072 : 345.0) no description available & (gnl|cdd|67037 : 163.0) no description available & (reliability: 1344.0) & (original description: Putative SAC3A, Description = SAC3 family protein A, PFAM = PF03399)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold27017_19372-25448' '(at1g26120 : 521.0) Isoprenylcysteine methylesterase-like 1 (ICME-LIKE1); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Carboxylesterase, type B (InterPro:IPR002018), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: prenylcysteine methylesterase (TAIR:AT5G15860.1); Has 9242 Blast hits to 9224 proteins in 1573 species: Archae - 109; Bacteria - 5404; Metazoa - 1813; Fungi - 590; Plants - 239; Viruses - 5; Other Eukaryotes - 1082 (source: NCBI BLink). & (gnl|cdd|36729 : 105.0) no description available & (gnl|cdd|31002 : 96.9) no description available & (reliability: 1042.0) & (original description: Putative IMCE, Description = Probable isoprenylcysteine alpha-carbonyl methylesterase ICME, PFAM = PF00135)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold27364_19816-25937' '(at3g02710 : 681.0) Encodes a protein with a putative role in mRNA splicing.; ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: RNA splicing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1716, eukaryotic (InterPro:IPR013180), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); Has 346 Blast hits to 342 proteins in 158 species: Archae - 0; Bacteria - 2; Metazoa - 149; Fungi - 94; Plants - 41; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|37945 : 481.0) no description available & (gnl|cdd|71650 : 123.0) no description available & (reliability: 1362.0) & (original description: Putative CTNNBL1, Description = Beta-catenin-like protein 1, PFAM = PF08216)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold27515_18789-22293' '(at5g64430 : 263.0) Octicosapeptide/Phox/Bem1p family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT5G09620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84866 : 83.0) no description available & (reliability: 526.0) & (original description: Putative At5g64430, Description = At5g64430, PFAM = PF00564)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold27622_22624-26865' '(at5g05990 : 206.0) Mitochondrial glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: Mitochondrial glycoprotein family protein (TAIR:AT3G55605.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37747 : 202.0) no description available & (gnl|cdd|85957 : 97.0) no description available & (reliability: 412.0) & (original description: Putative Sb03g006350, Description = Putative uncharacterized protein Sb03g006350, PFAM = PF02330)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold28028_15800-20711' '(at1g10190 : 218.0) Protein of Unknown Function (DUF239); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT4G15050.1); Has 640 Blast hits to 606 proteins in 22 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 4; Plants - 629; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66735 : 157.0) no description available & (reliability: 404.0) & (original description: Putative , Description = , PFAM = PF14365;PF03080)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold28287_1362-7017' '(at5g48440 : 395.0) FAD-dependent oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076); Has 4216 Blast hits to 4216 proteins in 1050 species: Archae - 57; Bacteria - 3005; Metazoa - 218; Fungi - 66; Plants - 52; Viruses - 0; Other Eukaryotes - 818 (source: NCBI BLink). & (gnl|cdd|31009 : 101.0) no description available & (reliability: 790.0) & (original description: Putative At5g48440, Description = Putative uncharacterized protein At5g48440, PFAM = PF01266)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold28822_22811-25986' '(at3g24080 : 187.0) KRR1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: KRR1 interacting protein 1, subgroup (InterPro:IPR007851), KRR1 interacting protein 1 (InterPro:IPR018034); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37620 : 166.0) no description available & (reliability: 374.0) & (original description: Putative At3g24080, Description = KRR1 family protein, PFAM = PF05178;PF12936)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold29084_21774-25439' '(at3g44510 : 400.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, root; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G08310.1). & (reliability: 728.0) & (original description: Putative At3g44510, Description = Alpha/beta-hydrolases family protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold29295_22323-34204' '(at4g11790 : 188.0) Pleckstrin homology (PH) domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein 1 (InterPro:IPR000156), Pleckstrin homology-type (InterPro:IPR011993); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37935 : 114.0) no description available & (gnl|cdd|29845 : 87.3) no description available & (reliability: 376.0) & (original description: Putative BnaA02g21600D, Description = BnaA02g21600D protein, PFAM = PF00638)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold30207_19340-25037' '(gnl|cdd|36491 : 444.0) no description available & (at1g10950 : 417.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis.; transmembrane nine 1 (TMN1); LOCATED IN: integral to membrane, Golgi apparatus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G37310.1); Has 1611 Blast hits to 1538 proteins in 326 species: Archae - 0; Bacteria - 16; Metazoa - 610; Fungi - 273; Plants - 454; Viruses - 0; Other Eukaryotes - 258 (source: NCBI BLink). & (gnl|cdd|66650 : 284.0) no description available & (reliability: 834.0) & (original description: Putative tm9sf3, Description = Transmembrane 9 superfamily member, PFAM = PF02990)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold30234_567-12414' '(at5g14530 : 495.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G66240.1); Has 22372 Blast hits to 13576 proteins in 557 species: Archae - 62; Bacteria - 5277; Metazoa - 7900; Fungi - 4335; Plants - 2143; Viruses - 0; Other Eukaryotes - 2655 (source: NCBI BLink). & (gnl|cdd|36659 : 344.0) no description available & (gnl|cdd|29257 : 100.0) no description available & (reliability: 990.0) & (original description: Putative WDR82, Description = WD repeat-containing protein 82, PFAM = PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold30505_1901-20112' '(at3g15090 : 491.0) GroES-like zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT1G23740.1); Has 32555 Blast hits to 32407 proteins in 2523 species: Archae - 489; Bacteria - 20756; Metazoa - 1208; Fungi - 3376; Plants - 855; Viruses - 0; Other Eukaryotes - 5871 (source: NCBI BLink). & (gnl|cdd|36412 : 232.0) no description available & (gnl|cdd|30949 : 202.0) no description available & (q8h0m1|qorh_spiol : 110.0) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) & (reliability: 982.0) & (original description: Putative Os01g0753100, Description = Os01g0753100 protein, PFAM = PF08240;PF13602)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold30521_1-4848' '(at1g03070 : 348.0) Bax inhibitor-1 family protein; FUNCTIONS IN: glutamate binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Inhibitor of apoptosis-promoting Bax1 related (InterPro:IPR006214); BEST Arabidopsis thaliana protein match is: Bax inhibitor-1 family protein (TAIR:AT4G02690.1). & (gnl|cdd|37533 : 207.0) no description available & (gnl|cdd|31014 : 82.6) no description available & (reliability: 696.0) & (original description: Putative At4g15470, Description = BI1-like protein, PFAM = PF01027)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold30674_4348-18804' '(at5g17250 : 899.0) Alkaline-phosphatase-like family protein; FUNCTIONS IN: transferase activity, catalytic activity; INVOLVED IN: GPI anchor biosynthetic process, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase (InterPro:IPR002591), Alkaline-phosphatase-like, core domain (InterPro:IPR017850); BEST Arabidopsis thaliana protein match is: Alkaline-phosphatase-like family protein (TAIR:AT2G22530.1); Has 1431 Blast hits to 1201 proteins in 306 species: Archae - 0; Bacteria - 228; Metazoa - 476; Fungi - 488; Plants - 85; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink). & (gnl|cdd|37337 : 504.0) no description available & (reliability: 1798.0) & (original description: Putative pigo, Description = GPI ethanolamine phosphate transferase 3, PFAM = PF01663)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold31033_14044-16586' '(at1g62422 : 121.0) unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12020.1); Has 87 Blast hits to 86 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold31221_141-13667' '(at1g19100 : 336.0) Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (TAIR:AT4G36280.1); Has 533 Blast hits to 518 proteins in 94 species: Archae - 0; Bacteria - 53; Metazoa - 227; Fungi - 0; Plants - 195; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|37056 : 118.0) no description available & (reliability: 672.0) & (original description: Putative BnaC08g36880D, Description = BnaC08g36880D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold31287_888-9004' '(at1g16180 : 489.0) Serinc-domain containing serine and sphingolipid biosynthesis protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TMS membrane protein/tumour differentially expressed protein (InterPro:IPR005016); BEST Arabidopsis thaliana protein match is: Serinc-domain containing serine and sphingolipid biosynthesis protein (TAIR:AT3G06170.1). & (gnl|cdd|66988 : 408.0) no description available & (gnl|cdd|37803 : 407.0) no description available & (reliability: 978.0) & (original description: Putative Sb01g016840, Description = Putative uncharacterized protein Sb01g016840, PFAM = PF03348)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold31298_19142-24309' '(at5g11650 : 511.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G73480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36668 : 317.0) no description available & (gnl|cdd|32448 : 169.0) no description available & (reliability: 1022.0) & (original description: Putative CSE16, Description = Caffeoyl shikimate esterase 16, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold31334_1-9358' '(at1g54380 : 172.0) spliceosome protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Survival motor neuron interacting protein 1 (InterPro:IPR007022); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42510.2); Has 222 Blast hits to 205 proteins in 80 species: Archae - 0; Bacteria - 6; Metazoa - 98; Fungi - 6; Plants - 54; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|68509 : 123.0) no description available & (reliability: 344.0) & (original description: Putative LOC100285014, Description = Putative ovule protein, PFAM = PF04938)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold31566_856-21883' '(at3g24090 : 909.0) glutamine-fructose-6-phosphate transaminase (isomerizing)s;sugar binding;transaminases; FUNCTIONS IN: sugar binding, transaminase activity, glutamine-fructose-6-phosphate transaminase (isomerizing) activity; INVOLVED IN: carbohydrate biosynthetic process, carbohydrate metabolic process, metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Sugar isomerase (SIS) (InterPro:IPR001347), Glucosamine-fructose-6-phosphate aminotransferase, isomerising (InterPro:IPR005855), Glutamine amidotransferase, type II (InterPro:IPR017932); Has 19000 Blast hits to 18984 proteins in 2800 species: Archae - 500; Bacteria - 10467; Metazoa - 411; Fungi - 223; Plants - 106; Viruses - 14; Other Eukaryotes - 7279 (source: NCBI BLink). & (gnl|cdd|36482 : 603.0) no description available & (gnl|cdd|30798 : 551.0) no description available & (reliability: 1818.0) & (original description: Putative glmS, Description = Glutamine--fructose-6-phosphate aminotransferase [isomerizing], PFAM = PF01380;PF01380;PF13522)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold32717_11801-16306' '(at5g51570 : 377.0) SPFH/Band 7/PHB domain-containing membrane-associated protein family; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT5G62740.1); Has 5870 Blast hits to 5870 proteins in 1885 species: Archae - 189; Bacteria - 4209; Metazoa - 145; Fungi - 209; Plants - 268; Viruses - 20; Other Eukaryotes - 830 (source: NCBI BLink). & (gnl|cdd|48219 : 284.0) no description available & (gnl|cdd|37831 : 278.0) no description available & (reliability: 754.0) & (original description: Putative hir4, Description = Hypersensitive induced reaction protein 4, PFAM = PF01145)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold33154_14616-21440' '(at2g43970 : 281.0) RNA-binding protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: ribonucleoprotein complex, nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344); BEST Arabidopsis thaliana protein match is: RNA-binding protein (TAIR:AT3G19090.1); Has 5536 Blast hits to 4258 proteins in 377 species: Archae - 4; Bacteria - 395; Metazoa - 1833; Fungi - 479; Plants - 433; Viruses - 20; Other Eukaryotes - 2372 (source: NCBI BLink). & (gnl|cdd|37066 : 260.0) no description available & (gnl|cdd|47984 : 106.0) no description available & (reliability: 562.0) & (original description: Putative FIP1, Description = La-related protein 7, PFAM = PF05383)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold33417_14051-18621' '(at2g44510 : 298.0) CDK inhibitor P21 binding protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: CDK inhibitor P21 binding protein (TAIR:AT5G03830.1); Has 392 Blast hits to 392 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 150; Fungi - 138; Plants - 52; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|38244 : 134.0) no description available & (reliability: 596.0) & (original description: Putative At2g44510, Description = Protein BCCIP homolog, PFAM = PF13862)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold33599_14221-21539' '(at1g61900 : 430.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30700.1). & (reliability: 860.0) & (original description: Putative PGSC0003DMG402005053, Description = Putative GPI-anchored protein At1g61900 family, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold33607_12906-20824' '(at5g64170 : 94.7) dentin sialophosphoprotein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54500.2); Has 181 Blast hits to 169 proteins in 40 species: Archae - 2; Bacteria - 18; Metazoa - 17; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold33706_12637-22810' '(at3g56120 : 548.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Met10 (InterPro:IPR003402); BEST Arabidopsis thaliana protein match is: Met-10+ like family protein (TAIR:AT4G27340.1); Has 1391 Blast hits to 1232 proteins in 427 species: Archae - 416; Bacteria - 202; Metazoa - 266; Fungi - 150; Plants - 114; Viruses - 0; Other Eukaryotes - 243 (source: NCBI BLink). & (gnl|cdd|37289 : 258.0) no description available & (gnl|cdd|66190 : 168.0) no description available & (reliability: 1096.0) & (original description: Putative TRM5, Description = tRNA (guanine(37)-N1)-methyltransferase, PFAM = PF02475)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold33742_888-4746' '(at1g69800 : 369.0) Cystathionine beta-synthase (CBS) protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: SNF1-related protein kinase regulatory subunit gamma 1 (TAIR:AT3G48530.1); Has 884 Blast hits to 801 proteins in 238 species: Archae - 117; Bacteria - 172; Metazoa - 187; Fungi - 63; Plants - 180; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (gnl|cdd|36975 : 203.0) no description available & (gnl|cdd|73140 : 125.0) no description available & (reliability: 738.0) & (original description: Putative CBSCBS2, Description = SNF1-related protein kinase regulatory subunit gamma-1-like, PFAM = PF00571;PF00571)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold34419_4429-14586' '(at1g27430 : 331.0) GYF domain-containing protein; CONTAINS InterPro DOMAIN/s: GYF (InterPro:IPR003169); BEST Arabidopsis thaliana protein match is: GYF domain-containing protein (TAIR:AT1G24300.1); Has 16615 Blast hits to 9086 proteins in 533 species: Archae - 0; Bacteria - 846; Metazoa - 6412; Fungi - 1516; Plants - 946; Viruses - 78; Other Eukaryotes - 6817 (source: NCBI BLink). & (reliability: 662.0) & (original description: Putative BnaAnng21680D, Description = BnaAnng21680D protein, PFAM = PF02213)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold34577_4786-13061' '(at1g13030 : 131.0) sphere organelles protein-related; Has 14464 Blast hits to 9695 proteins in 837 species: Archae - 14; Bacteria - 1320; Metazoa - 4989; Fungi - 1376; Plants - 652; Viruses - 103; Other Eukaryotes - 6010 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative COIL, Description = Atcoilin, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold34721_4887-15633' '(at5g48545 : 216.0) Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro.; histidine triad nucleotide-binding 3 (HINT3); CONTAINS InterPro DOMAIN/s: Histidine triad-like motif (InterPro:IPR011146), Histidine triad (HIT) protein (InterPro:IPR001310), Histidine triad, conserved site (InterPro:IPR019808), Histidine triad motif (InterPro:IPR011151); BEST Arabidopsis thaliana protein match is: HISTIDINE TRIAD NUCLEOTIDE-BINDING 2 (TAIR:AT1G31160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30883 : 142.0) no description available & (gnl|cdd|38485 : 100.0) no description available & (reliability: 432.0) & (original description: Putative HINT3, Description = Adenylylsulfatase HINT3, PFAM = PF01230)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold34908_16465-18977' '(at3g58000 : 87.0) VQ motif-containing protein; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT2G42140.1); Has 79 Blast hits to 79 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 79; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative VQ18, Description = AtVQ18, PFAM = PF05678)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold35345_18242-21681' '(at4g00300 : 387.0) fringe-related protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Malectin/receptor-like protein kinase (InterPro:IPR021720); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G24010.1). & (reliability: 774.0) & (original description: Putative At4g00300, Description = Fringe-related protein, PFAM = PF12819)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold35698_2853-17192' '(at5g24350 : 2133.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39 (InterPro:IPR013244). & (gnl|cdd|37008 : 884.0) no description available & (reliability: 4266.0) & (original description: Putative NAG, Description = Neuroblastoma-amplified protein, PFAM = PF08314;PF08314)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold35875_1-5056' '(gnl|cdd|72813 : 204.0) no description available & (at3g05270 : 166.0) Plant protein of unknown function (DUF869); EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G21810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative FPP, Description = Filament-like plant protein, PFAM = PF05911;PF05911;PF05911)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold36195_9582-21387' '(at2g25320 : 2098.0) TRAF-like family protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT2G25330.1); Has 73652 Blast hits to 40883 proteins in 2342 species: Archae - 900; Bacteria - 9328; Metazoa - 35691; Fungi - 5783; Plants - 4303; Viruses - 204; Other Eukaryotes - 17443 (source: NCBI BLink). & (gnl|cdd|37198 : 123.0) no description available & (gnl|cdd|58100 : 97.1) no description available & (reliability: 4196.0) & (original description: Putative CMS1, Description = Ubiquitin carboxyl-terminal hydrolase 13, PFAM = PF00917;PF00917)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold37254_6078-9916' '(at5g62740 : 494.0) HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1 (HIR1); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT1G69840.7); Has 5648 Blast hits to 5647 proteins in 1784 species: Archae - 171; Bacteria - 3783; Metazoa - 267; Fungi - 306; Plants - 270; Viruses - 3; Other Eukaryotes - 848 (source: NCBI BLink). & (gnl|cdd|37831 : 367.0) no description available & (gnl|cdd|48219 : 349.0) no description available & (reliability: 988.0) & (original description: Putative hir3, Description = Hypersensitive-induced reaction protein 3, PFAM = PF01145)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold37964_8848-20435' '(at5g65290 : 709.0) LMBR1-like membrane protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: LMBR1-like membrane protein, conserved region (InterPro:IPR006876); Has 378 Blast hits to 361 proteins in 164 species: Archae - 0; Bacteria - 1; Metazoa - 119; Fungi - 103; Plants - 62; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|37507 : 447.0) no description available & (reliability: 1418.0) & (original description: Putative Os02g0758100, Description = LMBR1 integral membrane protein-like, PFAM = PF04791)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold38310_7067-11854' '(at2g18540 : 368.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT4G36700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84597 : 101.0) no description available & (gnl|cdd|36247 : 100.0) no description available & (p13918|vclc_pea : 86.3) Vicilin precursor - Pisum sativum (Garden pea) & (reliability: 736.0) & (original description: Putative ftsY, Description = Vicilin-like antimicrobial peptides 2-2, PFAM = PF00190;PF00190)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold38443_9536-19025' '(at1g68260 : 233.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT1G68280.1); Has 2036 Blast hits to 2035 proteins in 690 species: Archae - 16; Bacteria - 1416; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 524 (source: NCBI BLink). & (gnl|cdd|31166 : 97.3) no description available & (reliability: 466.0) & (original description: Putative ALT4, Description = Acyl-acyl carrier protein thioesterase ATL4, chloroplastic, PFAM = PF03061)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold38718_5484-10789' '(at1g11820 : 696.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT2G01630.1). & (gnl|cdd|84700 : 243.0) no description available & (p52409|e13b_wheat : 226.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1392.0) & (original description: Putative At1g11820, Description = O-glycosyl hydrolases family 17 protein, PFAM = PF00332;PF07983)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold38750_3390-7624' '(at2g45010 : 253.0) PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT5G51400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86720 : 91.9) no description available & (reliability: 506.0) & (original description: Putative CNR6, Description = Cell number regulator 6, PFAM = PF04749)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold39091_1-7734' '(at1g54650 : 377.0) Methyltransferase family protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase, METTL2, predicted (InterPro:IPR017280), Methyltransferase type 12 (InterPro:IPR013217); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G26200.1). & (gnl|cdd|37572 : 220.0) no description available & (reliability: 754.0) & (original description: Putative At1g54650, Description = Methyltransferase family protein, PFAM = PF13489)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold40043_17750-21846' '(at2g20590 : 247.0) Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, chloroplast; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT4G28430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 494.0) & (original description: Putative RTNLB17, Description = Reticulon-like protein B17, PFAM = PF02453)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold40151_2350-8669' '(at1g79740 : 954.0) hAT transposon superfamily; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 899 Blast hits to 801 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 5; Plants - 875; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|68508 : 182.0) no description available & (reliability: 1908.0) & (original description: Putative Os01g0222700, Description = Os01g0222700 protein, PFAM = PF05699;PF02892;PF04937)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold40183_795-14777' '(at3g23980 : 307.0) Encodes a protein that interacts with the Polycomb-group (Pc-G) histone methyltransferase CLF (CURLY LEAF). It colocalizes with CLF to the nucleus and represses a subset of Pc-G target genes. The pleiotropic developmental mutant phenotype suggests that BLI prevents premature differentiation.; BLISTER (BLI); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: flower development, seed development, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 32015 Blast hits to 19612 proteins in 1632 species: Archae - 290; Bacteria - 4748; Metazoa - 14972; Fungi - 3061; Plants - 1469; Viruses - 92; Other Eukaryotes - 7383 (source: NCBI BLink). & (reliability: 614.0) & (original description: Putative BnaC03g43540D, Description = BnaC03g43540D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold40339_1-4588' '(at2g36330 : 171.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT5G62820.1); Has 241 Blast hits to 239 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 1; Plants - 232; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68120 : 107.0) no description available & (reliability: 342.0) & (original description: Putative PGSC0003DMG400027092, Description = CASP-like protein, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold40477_1-7959' '(at5g50310 : 327.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G07720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36444 : 132.0) no description available & (reliability: 654.0) & (original description: Putative , Description = Kelch domain-containing protein 4, PFAM = PF13854;PF13422)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold40530_13153-19166' '(at1g28410 : 125.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT4G31340.2); Has 425 Blast hits to 402 proteins in 77 species: Archae - 4; Bacteria - 22; Metazoa - 249; Fungi - 4; Plants - 98; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative , Description = Epidermal growth factor receptor substrate 15-like 1, putative, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold40634_624-6429' '(at1g61780 : 143.0) postsynaptic protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Microtubule-associated protein CRIPT (InterPro:IPR019367); Has 230 Blast hits to 228 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 46; Plants - 56; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|38686 : 123.0) no description available & (reliability: 286.0) & (original description: Putative Cript, Description = Cysteine-rich PDZ-binding protein, PFAM = PF10235)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold40710_1-12585' '(at1g60670 : 199.0) Protein of unknown function (DUF3755); INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3755 (InterPro:IPR022228); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3755) (TAIR:AT1G10820.2); Has 165 Blast hits to 165 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative BnaA08g25560D, Description = BnaA08g25560D protein, PFAM = PF12579)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold41429_1-11323' '(at5g42570 : 93.2) B-cell receptor-associated 31-like; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: B-cell receptor-associated protein 31-like (TAIR:AT1G11905.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative PGSC0003DMG400033658, Description = , PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold41473_1429-14939' '(at1g02100 : 389.0) Leucine carboxyl methyltransferase; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine carboxyl methyltransferase, LCTM1 1 (InterPro:IPR016651), Leucine carboxyl methyltransferase, eukaryotic (InterPro:IPR021121), Leucine carboxyl methyltransferase (InterPro:IPR007213); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86530 : 217.0) no description available & (gnl|cdd|38129 : 214.0) no description available & (reliability: 778.0) & (original description: Putative At1g02100, Description = Leucine carboxyl methyltransferase, PFAM = PF04072)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold41767_228-18595' '(at2g04940 : 343.0) scramblase-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Scramblase (InterPro:IPR005552); Has 427 Blast hits to 416 proteins in 142 species: Archae - 0; Bacteria - 29; Metazoa - 228; Fungi - 113; Plants - 38; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|67419 : 171.0) no description available & (gnl|cdd|35840 : 139.0) no description available & (reliability: 686.0) & (original description: Putative At2g04940, Description = Altered inheritance rate of mitochondria protein 25 isoform 1, PFAM = PF03803)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold41947_1367-6399' '(at3g06610 : 109.0) DNA-binding enhancer protein-related; Has 198 Blast hits to 198 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi - 17; Plants - 36; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative F5E6.6, Description = DNA-binding enhancer-like protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold42278_8260-12086' '(at3g58830 : 292.0) haloacid dehalogenase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIIA (InterPro:IPR006549), Protein of unknown function DUF2010 (InterPro:IPR019001), HAD-superfamily phosphatase, subfamily IIIA (InterPro:IPR010021); Has 1169 Blast hits to 1165 proteins in 593 species: Archae - 0; Bacteria - 976; Metazoa - 0; Fungi - 84; Plants - 42; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|38172 : 211.0) no description available & (gnl|cdd|87964 : 168.0) no description available & (reliability: 584.0) & (original description: Putative At3g58830, Description = At3g58830, PFAM = PF09419)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold42845_1-12119' '(at4g27860 : 157.0) vacuolar iron transporter (VIT) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: embryo, hypocotyl, root, pedicel, leaf; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217), Cytokine, IL-1-like (InterPro:IPR008996); BEST Arabidopsis thaliana protein match is: Vacuolar iron transporter (VIT) family protein (TAIR:AT4G27870.1). & (gnl|cdd|85817 : 84.2) no description available & (reliability: 314.0) & (original description: Putative MEB1, Description = Vacuolar iron transporter-like protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold42890_1482-15041' '(at1g15740 : 607.0) Leucine-rich repeat family protein; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G23840.1); Has 38052 Blast hits to 19856 proteins in 856 species: Archae - 6; Bacteria - 8624; Metazoa - 11681; Fungi - 680; Plants - 12072; Viruses - 79; Other Eukaryotes - 4910 (source: NCBI BLink). & (gnl|cdd|39396 : 88.1) no description available & (reliability: 1214.0) & (original description: Putative glysoja_031857, Description = F-box/LRR-repeat protein 14, PFAM = PF13516;PF13516;PF13516;PF13516;PF13516;PF13516;PF13855;PF13855;PF13855)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold43017_5294-15856' '(at4g15050 : 197.0) Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G10190.1); Has 633 Blast hits to 604 proteins in 22 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 6; Plants - 620; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66735 : 162.0) no description available & (reliability: 372.0) & (original description: Putative , Description = , PFAM = PF14365;PF03080)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold43157_10411-16469' '(gnl|cdd|36954 : 93.3) no description available & (at1g05785 : 92.8) Got1/Sft2-like vescicle transport protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Got1/SFT2-like (InterPro:IPR007305); BEST Arabidopsis thaliana protein match is: Got1/Sft2-like vescicle transport protein family (TAIR:AT5G01430.2); Has 450 Blast hits to 450 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 165; Fungi - 111; Plants - 97; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (reliability: 185.6) & (original description: Putative pco097248, Description = Golgi transport 1 protein B, PFAM = PF04178)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold43620_1-2371' '(at4g10750 : 408.0) Phosphoenolpyruvate carboxylase family protein; FUNCTIONS IN: carbon-carbon lyase activity, catalytic activity; INVOLVED IN: in 7 processes; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), HpcH/HpaI aldolase (InterPro:IPR005000); BEST Arabidopsis thaliana protein match is: aldolase like (TAIR:AT4G24080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33628 : 191.0) no description available & (reliability: 816.0) & (original description: Putative ALL1, Description = Aldolase like protein, PFAM = PF03328)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold43895_308-15448' '(at1g19100 : 476.0) Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (TAIR:AT4G36280.1); Has 533 Blast hits to 518 proteins in 94 species: Archae - 0; Bacteria - 53; Metazoa - 227; Fungi - 0; Plants - 195; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|37056 : 174.0) no description available & (reliability: 952.0) & (original description: Putative CRH1, Description = MORC family CW-type zinc finger protein 3, PFAM = PF13589)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold43904_1025-9213' '(at1g04970 : 459.0) lipid-binding serum glycoprotein family protein; FUNCTIONS IN: lipid binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Bactericidal permeability-increasing protein, alpha/beta domain (InterPro:IPR017943), Lipid-binding serum glycoprotein, N-terminal (InterPro:IPR017942), Lipid-binding serum glycoprotein, C-terminal (InterPro:IPR001124); BEST Arabidopsis thaliana protein match is: lipid-binding serum glycoprotein family protein (TAIR:AT3G20270.2); Has 420 Blast hits to 417 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 344; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|39362 : 243.0) no description available & (gnl|cdd|29338 : 153.0) no description available & (reliability: 918.0) & (original description: Putative At1g04970, Description = Putative BPI/LBP family protein At1g04970, PFAM = PF02886;PF01273)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold44177_745-7285' '(at1g45063 : 83.6) copper ion binding;electron carriers; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: plastocyanin-like domain-containing protein (TAIR:AT3G53330.1); Has 2601 Blast hits to 1373 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2600; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66026 : 80.7) no description available & (reliability: 167.2) & (original description: Putative BCP, Description = Blue copper protein, PFAM = PF02298;PF02298)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold44915_1-6340' '(at5g53390 : 263.0) O-acyltransferase (WSD1-like) family protein; CONTAINS InterPro DOMAIN/s: O-acyltransferase, WSD1, C-terminal (InterPro:IPR009721), O-acyltransferase, WSD1, N-terminal (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT2G38995.2); Has 1220 Blast hits to 1207 proteins in 180 species: Archae - 4; Bacteria - 957; Metazoa - 16; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|70441 : 144.0) no description available & (reliability: 482.0) & (original description: Putative KK1_033374, Description = O-acyltransferase WSD1, PFAM = PF06974;PF03007)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold44915_5685-11125' '(at2g23360 : 236.0) Plant protein of unknown function (DUF869); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G19835.2); Has 38218 Blast hits to 24021 proteins in 1620 species: Archae - 547; Bacteria - 4231; Metazoa - 19834; Fungi - 3463; Plants - 2306; Viruses - 121; Other Eukaryotes - 7716 (source: NCBI BLink). & (gnl|cdd|72813 : 157.0) no description available & (reliability: 472.0) & (original description: Putative PGSC0003DMG400025778, Description = Filament-like plant protein 7, putative isoform 1, PFAM = PF05911;PF05911;PF05911)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold44943_8889-14126' '(at3g16310 : 373.0) mitotic phosphoprotein N' end (MPPN) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: MPPN (InterPro:IPR007846), Nucleoporin, NUP53 (InterPro:IPR017389); Has 220 Blast hits to 220 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 5; Plants - 57; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|39486 : 196.0) no description available & (gnl|cdd|68734 : 119.0) no description available & (reliability: 746.0) & (original description: Putative NUP35, Description = Nuclear pore complex protein NUP35, PFAM = PF05172)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold45624_6225-12889' '(at5g64170 : 85.5) dentin sialophosphoprotein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54500.2); Has 181 Blast hits to 169 proteins in 40 species: Archae - 2; Bacteria - 18; Metazoa - 17; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold46206_9631-13527' '(at1g15330 : 353.0) Cystathionine beta-synthase (CBS) protein; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT1G80090.1); Has 526 Blast hits to 526 proteins in 132 species: Archae - 6; Bacteria - 4; Metazoa - 257; Fungi - 91; Plants - 124; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|36975 : 154.0) no description available & (gnl|cdd|73140 : 109.0) no description available & (reliability: 706.0) & (original description: Putative PV42A, Description = SNF1-related protein kinase regulatory subunit gamma-like PV42a, PFAM = PF00571)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold46308_102-6379' '(at1g55090 : 715.0) carbon-nitrogen hydrolase family protein; FUNCTIONS IN: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, NAD+ synthase (glutamine-hydrolyzing) activity, ATP binding; INVOLVED IN: nitrogen compound metabolic process, NAD biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), NAD synthase (InterPro:IPR003694), Glutamine-dependent NAD(+) synthetase, GAT domain-containing (InterPro:IPR014445), NAD/GMP synthase (InterPro:IPR022310); Has 5923 Blast hits to 5903 proteins in 2409 species: Archae - 233; Bacteria - 4478; Metazoa - 145; Fungi - 142; Plants - 70; Viruses - 0; Other Eukaryotes - 855 (source: NCBI BLink). & (gnl|cdd|37514 : 622.0) no description available & (gnl|cdd|30166 : 230.0) no description available & (reliability: 1430.0) & (original description: Putative BnaC06g41720D, Description = BnaC06g41720D protein, PFAM = PF02540)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold47388_2909-7522' '(gnl|cdd|37940 : 122.0) no description available & (at3g12180 : 108.0) Cornichon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular signaling pathway; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cornichon (InterPro:IPR003377); BEST Arabidopsis thaliana protein match is: Cornichon family protein (TAIR:AT1G12390.1); Has 605 Blast hits to 605 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 316; Fungi - 159; Plants - 93; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|66954 : 91.8) no description available & (reliability: 216.0) & (original description: Putative At3g12180, Description = Protein cornichon homolog 1, PFAM = PF03311)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold47491_5689-15697' '(at5g51400 : 265.0) PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT2G45010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86720 : 89.2) no description available & (reliability: 518.0) & (original description: Putative CNR6, Description = Cell number regulator 6, PFAM = PF04749)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold48229_7031-15847' '(at2g28390 : 674.0) SAND family protein; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar fusion protein MON1 (InterPro:IPR004353); Has 753 Blast hits to 594 proteins in 226 species: Archae - 6; Bacteria - 38; Metazoa - 289; Fungi - 213; Plants - 47; Viruses - 3; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|66814 : 278.0) no description available & (gnl|cdd|36215 : 257.0) no description available & (reliability: 1348.0) & (original description: Putative At2g28390, Description = At2g28390/T1B3.9, PFAM = PF03164)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold48229_7057-14354' '(at2g28390 : 547.0) SAND family protein; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar fusion protein MON1 (InterPro:IPR004353); Has 753 Blast hits to 594 proteins in 226 species: Archae - 6; Bacteria - 38; Metazoa - 289; Fungi - 213; Plants - 47; Viruses - 3; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|66814 : 222.0) no description available & (gnl|cdd|36215 : 208.0) no description available & (reliability: 1094.0) & (original description: Putative At2g28390, Description = At2g28390/T1B3.9, PFAM = PF03164)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold49472_3061-12624' '(at3g05090 : 1058.0) Encodes a DCAF protein. Mutants are defective in lateral root development and suggest roles for DDB1≠Cul4ñmediated protein degradation in regulating auxin accumulation during lateral root primordium development and lateral root meristem emergence.; LATERAL ROOT STIMULATOR 1 (LRS1); FUNCTIONS IN: nucleotide binding; INVOLVED IN: lateral root formation; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Protein of unknown function DUF3337 (InterPro:IPR021772), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, alpha subunit (TAIR:AT1G62020.1); Has 59803 Blast hits to 26869 proteins in 729 species: Archae - 50; Bacteria - 7042; Metazoa - 23770; Fungi - 14096; Plants - 7202; Viruses - 3; Other Eukaryotes - 7640 (source: NCBI BLink). & (gnl|cdd|35529 : 699.0) no description available & (gnl|cdd|29257 : 165.0) no description available & (reliability: 2116.0) & (original description: Putative LRS1, Description = AT3g05090/T12H1_5, PFAM = PF00400;PF00400;PF00400;PF00400;PF11816)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold49627_3457-9020' '(gnl|cdd|35504 : 523.0) no description available & (at5g24320 : 478.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G53500.1); Has 26091 Blast hits to 16604 proteins in 671 species: Archae - 60; Bacteria - 5328; Metazoa - 9578; Fungi - 5238; Plants - 2794; Viruses - 3; Other Eukaryotes - 3090 (source: NCBI BLink). & (gnl|cdd|29257 : 117.0) no description available & (reliability: 956.0) & (original description: Putative Pmc733, Description = Putative copper-inducible 35.6 kDa protein, PFAM = PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold50036_1906-8478' '(at4g24930 : 180.0) thylakoid lumenal 17.9 kDa protein, chloroplast; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 48 Blast hits to 48 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative IDP1426, Description = Thylakoid lumenal 17.9 kDa protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold51731_4405-14552' '(at1g03110 : 397.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, alpha subunit (TAIR:AT2G21390.1); Has 13545 Blast hits to 7977 proteins in 481 species: Archae - 46; Bacteria - 4157; Metazoa - 4042; Fungi - 2887; Plants - 1145; Viruses - 0; Other Eukaryotes - 1268 (source: NCBI BLink). & (gnl|cdd|39117 : 118.0) no description available & (gnl|cdd|29257 : 80.4) no description available & (reliability: 794.0) & (original description: Putative PGSC0003DMG400005331, Description = tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit, PFAM = PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold52247_2055-10578' '(at1g45231 : 363.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: RNA capping, RNA methylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202), RNA cap guanine-N2 methyltransferase (InterPro:IPR019012); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G30550.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37941 : 242.0) no description available & (gnl|cdd|87990 : 232.0) no description available & (reliability: 726.0) & (original description: Putative TGS1, Description = Trimethylguanosine synthase, PFAM = PF09445)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold52448_4581-9352' '(at1g52510 : 316.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G12830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 632.0) & (original description: Putative At1g52510, Description = Alpha/beta fold hydrolase, PFAM = PF00561)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold52493_16441-23647' '(at2g37240 : 296.0) Thioredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT5G65840.1); Has 368 Blast hits to 368 proteins in 75 species: Archae - 0; Bacteria - 23; Metazoa - 194; Fungi - 17; Plants - 121; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|39698 : 164.0) no description available & (gnl|cdd|48519 : 122.0) no description available & (reliability: 592.0) & (original description: Putative At2g37240, Description = Thioredoxin-like protein AAED1, chloroplastic, PFAM = PF13911)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold52513_6605-14281' '(at5g61330 : 239.0) rRNA processing protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TRAUB (InterPro:IPR012617); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37984 : 145.0) no description available & (gnl|cdd|71599 : 83.0) no description available & (reliability: 478.0) & (original description: Putative At5g61330, Description = Protein AATF, PFAM = PF13339;PF08164)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold53360_1-9269' '(at3g07080 : 385.0) EamA-like transporter family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: EamA-like transporter family (TAIR:AT4G32140.1); Has 3286 Blast hits to 3282 proteins in 690 species: Archae - 51; Bacteria - 1416; Metazoa - 341; Fungi - 278; Plants - 200; Viruses - 0; Other Eukaryotes - 1000 (source: NCBI BLink). & (gnl|cdd|37976 : 328.0) no description available & (reliability: 770.0) & (original description: Putative BnaCnng52190D, Description = BnaCnng52190D protein, PFAM = PF06027)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold53560_3809-8231' '(at1g29380 : 132.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT2G30933.1); Has 79591 Blast hits to 28935 proteins in 1734 species: Archae - 133; Bacteria - 28582; Metazoa - 23109; Fungi - 4542; Plants - 9902; Viruses - 1060; Other Eukaryotes - 12263 (source: NCBI BLink). & (gnl|cdd|87420 : 126.0) no description available & (p52409|e13b_wheat : 93.6) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 264.0) & (original description: Putative At1g09460, Description = Carbohydrate-binding X8 domain protein, PFAM = PF07983)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold55142_1533-5556' '(at4g02860 : 342.0) Phenazine biosynthesis PhzC/PhzF protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phenazine biosynthesis PhzC/PhzF protein (InterPro:IPR003719); BEST Arabidopsis thaliana protein match is: Phenazine biosynthesis PhzC/PhzF protein (TAIR:AT1G03210.1); Has 4066 Blast hits to 4061 proteins in 1265 species: Archae - 50; Bacteria - 3051; Metazoa - 120; Fungi - 130; Plants - 90; Viruses - 0; Other Eukaryotes - 625 (source: NCBI BLink). & (gnl|cdd|38243 : 295.0) no description available & (gnl|cdd|86028 : 265.0) no description available & (reliability: 684.0) & (original description: Putative yddE, Description = Putative isomerase YddE, PFAM = PF02567)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold55144_2611-8503' '(at3g44510 : 373.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, root; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G08310.1). & (reliability: 682.0) & (original description: Putative At3g44510, Description = Alpha/beta-hydrolases family protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold55251_973-6723' '(at5g41460 : 719.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT4G23490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68226 : 446.0) no description available & (gnl|cdd|37457 : 309.0) no description available & (reliability: 1438.0) & (original description: Putative GT31C5, Description = Glycosyltransferase-like protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold55667_2627-12261' '(gnl|cdd|37547 : 579.0) no description available & (at1g05350 : 571.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, catalytic activity, cofactor binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: SUMO-activating enzyme 2 (TAIR:AT2G21470.1); Has 12729 Blast hits to 12531 proteins in 2437 species: Archae - 211; Bacteria - 8204; Metazoa - 1010; Fungi - 713; Plants - 367; Viruses - 0; Other Eukaryotes - 2224 (source: NCBI BLink). & (gnl|cdd|30111 : 219.0) no description available & (reliability: 1142.0) & (original description: Putative uba5, Description = Ubiquitin-like modifier-activating enzyme 5, PFAM = PF00899)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold55816_2104-6383' '(at2g26680 : 421.0) CONTAINS InterPro DOMAIN/s: Methyltransferase FkbM (InterPro:IPR006342); Has 1073 Blast hits to 1073 proteins in 243 species: Archae - 45; Bacteria - 509; Metazoa - 0; Fungi - 4; Plants - 60; Viruses - 4; Other Eukaryotes - 451 (source: NCBI BLink). & (reliability: 842.0) & (original description: Putative At2g26680, Description = Expressed protein, PFAM = PF05050)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold55899_260-6273' '(at5g11650 : 440.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G73480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36668 : 260.0) no description available & (gnl|cdd|32448 : 148.0) no description available & (reliability: 880.0) & (original description: Putative CSE16, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold56364_3302-12574' '(at1g13160 : 572.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function, nucleolar NUC130/133, N-terminal (InterPro:IPR012977), Armadillo-type fold (InterPro:IPR016024), SDA1 (InterPro:IPR007949); BEST Arabidopsis thaliana protein match is: SDA1 family protein (TAIR:AT4G31520.1); Has 29206 Blast hits to 13573 proteins in 931 species: Archae - 207; Bacteria - 10267; Metazoa - 6952; Fungi - 3668; Plants - 1163; Viruses - 549; Other Eukaryotes - 6400 (source: NCBI BLink). & (gnl|cdd|37440 : 571.0) no description available & (gnl|cdd|86842 : 189.0) no description available & (reliability: 1144.0) & (original description: Putative BnaC08g40520D, Description = BnaC08g40520D protein, PFAM = PF05285;PF08158)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold57075_10453-12796' '(at3g48800 : 101.0) Sterile alpha motif (SAM) domain-containing protein; CONTAINS InterPro DOMAIN/s: Sterile alpha motif-type (InterPro:IPR013761), Sterile alpha motif (InterPro:IPR001660), Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 2 (InterPro:IPR011510); BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT5G23680.1); Has 394 Blast hits to 394 proteins in 73 species: Archae - 0; Bacteria - 19; Metazoa - 279; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative , Description = , PFAM = PF00536)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold57448_1-10262' '(at5g64440 : 804.0) AtFAAH (fatty acid amide hydrolase) modulates endogenous NAEs (N-Acylethanolamines) levels in plants by hydrolyzing NAEs to ethanolamine and their corresponding free fatty acids. NAE depletion likely participates in the regulation of plant growth.; fatty acid amide hydrolase (FAAH); FUNCTIONS IN: N-(long-chain-acyl)ethanolamine deacylase activity, amidase activity; INVOLVED IN: defense response to bacterium; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT3G25660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36425 : 357.0) no description available & (gnl|cdd|30503 : 323.0) no description available & (reliability: 1608.0) & (original description: Putative FAAH, Description = Fatty acid amide hydrolase, PFAM = PF01425)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold57589_3157-12634' '(at1g27430 : 331.0) GYF domain-containing protein; CONTAINS InterPro DOMAIN/s: GYF (InterPro:IPR003169); BEST Arabidopsis thaliana protein match is: GYF domain-containing protein (TAIR:AT1G24300.1); Has 16615 Blast hits to 9086 proteins in 533 species: Archae - 0; Bacteria - 846; Metazoa - 6412; Fungi - 1516; Plants - 946; Viruses - 78; Other Eukaryotes - 6817 (source: NCBI BLink). & (reliability: 662.0) & (original description: Putative At5g42950, Description = BnaAnng21680D protein, PFAM = PF02213)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold57685_1-12609' '(at2g26060 : 408.0) embryo defective 1345 (emb1345); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G32990.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35864 : 360.0) no description available & (gnl|cdd|29257 : 174.0) no description available & (reliability: 816.0) & (original description: Putative ciao1, Description = Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold58280_9721-12417' '(at3g62040 : 317.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyrimidine 5-nucleotidase (InterPro:IPR010237), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G59480.1); Has 2327 Blast hits to 2327 proteins in 521 species: Archae - 22; Bacteria - 785; Metazoa - 0; Fungi - 147; Plants - 198; Viruses - 0; Other Eukaryotes - 1175 (source: NCBI BLink). & (gnl|cdd|38319 : 297.0) no description available & (gnl|cdd|31215 : 84.2) no description available & (reliability: 634.0) & (original description: Putative nod33, Description = Putative phosphatase, PFAM = PF13419)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold58314_1-9528' '(at5g05520 : 622.0) Outer membrane OMP85 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial surface antigen (D15) (InterPro:IPR000184), Surface antigen variable number (InterPro:IPR010827); BEST Arabidopsis thaliana protein match is: Outer membrane OMP85 family protein (TAIR:AT3G11070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37813 : 364.0) no description available & (gnl|cdd|34388 : 147.0) no description available & (reliability: 1244.0) & (original description: Putative Os05g0470800, Description = Os05g0470800 protein, PFAM = PF07244;PF01103)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold58680_1-6457' '(at1g33780 : 347.0) Protein of unknown function (DUF179); LOCATED IN: chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF179 (InterPro:IPR003774); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF179) (TAIR:AT3G29240.2); Has 2552 Blast hits to 2552 proteins in 947 species: Archae - 0; Bacteria - 1880; Metazoa - 0; Fungi - 0; Plants - 126; Viruses - 0; Other Eukaryotes - 546 (source: NCBI BLink). & (gnl|cdd|86052 : 171.0) no description available & (reliability: 694.0) & (original description: Putative F14M2.10, Description = Putative uncharacterized protein At1g33780, PFAM = PF02622)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold58962_320-7008' '(at2g35710 : 646.0) Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process, biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G16600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37161 : 90.6) no description available & (reliability: 1292.0) & (original description: Putative PGSIP7, Description = Putative glucuronosyltransferase PGSIP7, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold59692_5665-10674' '(at5g53940 : 196.0) Yippee family putative zinc-binding protein; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: Yippee family putative zinc-binding protein (TAIR:AT2G40110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p59234|yipl_soltu : 167.0) Protein yippee-like - Solanum tuberosum (Potato) & (gnl|cdd|38609 : 155.0) no description available & (gnl|cdd|66871 : 125.0) no description available & (reliability: 392.0) & (original description: Putative ypel, Description = Protein yippee-like, PFAM = PF03226)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold60340_5993-10047' '(at5g01650 : 192.0) Tautomerase/MIF superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: inflammatory response, response to other organism; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tautomerase (InterPro:IPR014347), Macrophage migration inhibitory factor (InterPro:IPR001398); BEST Arabidopsis thaliana protein match is: Tautomerase/MIF superfamily protein (TAIR:AT5G57170.2); Has 820 Blast hits to 820 proteins in 207 species: Archae - 0; Bacteria - 141; Metazoa - 384; Fungi - 26; Plants - 141; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|36970 : 144.0) no description available & (gnl|cdd|85294 : 83.4) no description available & (reliability: 384.0) & (original description: Putative PGSC0003DMG400015887, Description = Light-inducible protein ATLS1, PFAM = PF01187)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold60356_3127-9131' '(at4g26455 : 131.0) WPP domain interacting protein 1 (WIP1); FUNCTIONS IN: protein homodimerization activity, protein heterodimerization activity; LOCATED IN: nuclear envelope, cell plate; EXPRESSED IN: root; BEST Arabidopsis thaliana protein match is: WPP domain interacting protein 2 (TAIR:AT5G56210.1); Has 450 Blast hits to 403 proteins in 126 species: Archae - 15; Bacteria - 85; Metazoa - 55; Fungi - 14; Plants - 89; Viruses - 10; Other Eukaryotes - 182 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative PGSC0003DMG400008693, Description = Putative WPP domain-interacting protein 2-like, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold60496_5360-9381' '(at1g03910 : 672.0) EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cactin protein, cactus-binding domain, C-terminal (InterPro:IPR019134), Cactin, central region (InterPro:IPR018816); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36815.2). & (gnl|cdd|37581 : 523.0) no description available & (reliability: 1344.0) & (original description: Putative CTN, Description = Cactin, PFAM = PF10312;PF09732)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold60896_3166-10914' '(at1g03060 : 397.0) Encodes a WD/BEACH domain protein involved in cell morphogenesis.; SPIRRIG (SPI); FUNCTIONS IN: binding; INVOLVED IN: signal transduction, multidimensional cell growth, vacuole organization, trichome morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Beige/BEACH (InterPro:IPR000409), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Beige/BEACH domain ;WD domain, G-beta repeat protein (TAIR:AT4G02660.1); Has 8491 Blast hits to 6383 proteins in 382 species: Archae - 4; Bacteria - 1376; Metazoa - 3669; Fungi - 1335; Plants - 868; Viruses - 0; Other Eukaryotes - 1239 (source: NCBI BLink). & (gnl|cdd|36999 : 326.0) no description available & (reliability: 794.0) & (original description: Putative SPI, Description = WD repeat and FYVE domain-containing protein 3, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold60935_1-9448' '(at3g45770 : 449.0) Polyketide synthase, enoylreductase family protein; FUNCTIONS IN: copper ion binding, zinc ion binding, ATP binding; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: ARP protein (REF) (TAIR:AT1G49670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35248 : 386.0) no description available & (gnl|cdd|30949 : 176.0) no description available & (reliability: 898.0) & (original description: Putative mecr, Description = Trans-2-enoyl-CoA reductase, mitochondrial, PFAM = PF00107;PF08240)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold61761_5145-14910' '(at4g22990 : 1054.0) Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein (TAIR:AT4G11810.1). & (gnl|cdd|37536 : 304.0) no description available & (gnl|cdd|66759 : 119.0) no description available & (reliability: 2108.0) & (original description: Putative At4g22990, Description = SPX domain-containing membrane protein At4g22990, PFAM = PF07690;PF03105)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold61870_2890-8871' '(at2g46560 : 485.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat (InterPro:IPR001680), RAVE protein 1 C-terminal (InterPro:IPR022033), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 2273 Blast hits to 1588 proteins in 291 species: Archae - 0; Bacteria - 657; Metazoa - 469; Fungi - 690; Plants - 137; Viruses - 0; Other Eukaryotes - 320 (source: NCBI BLink). & (gnl|cdd|36282 : 347.0) no description available & (reliability: 970.0) & (original description: Putative At2g46560, Description = Transducin family protein / WD-40 repeat family protein, PFAM = PF12234)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold61954_352-6578' '(gnl|cdd|72813 : 245.0) no description available & (at3g05270 : 199.0) Plant protein of unknown function (DUF869); EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G21810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative FPP, Description = Filament-like plant protein, PFAM = PF05911;PF05911;PF05911)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold61980_1-11362' '(gnl|cdd|30503 : 177.0) no description available & (at5g64440 : 167.0) AtFAAH (fatty acid amide hydrolase) modulates endogenous NAEs (N-Acylethanolamines) levels in plants by hydrolyzing NAEs to ethanolamine and their corresponding free fatty acids. NAE depletion likely participates in the regulation of plant growth.; fatty acid amide hydrolase (FAAH); FUNCTIONS IN: N-(long-chain-acyl)ethanolamine deacylase activity, amidase activity; INVOLVED IN: defense response to bacterium; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT3G25660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36425 : 158.0) no description available & (reliability: 334.0) & (original description: Putative gatA, Description = Fatty acid amide hydrolase, PFAM = PF01425)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold62414_6499-10214' '(at3g49070 : 126.0) Protein of unknown function (DUF677); INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT3G19330.1); Has 169 Blast hits to 169 proteins in 18 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 155; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68623 : 105.0) no description available & (reliability: 252.0) & (original description: Putative PGSC0003DMG400024098, Description = , PFAM = PF05055)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold63170_3235-7665' '(at4g13600 : 139.0) Carbohydrate-binding X8 domain superfamily protein; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: plasmodesmata callose-binding protein 3 (TAIR:AT1G18650.1); Has 487 Blast hits to 485 proteins in 21 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 8; Plants - 474; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 113.0) no description available & (p52409|e13b_wheat : 89.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 278.0) & (original description: Putative PDCB3, Description = CBM43-containing protein, PFAM = PF07983)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold64588_1-9552' '(at5g19820 : 919.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37382 : 607.0) no description available & (reliability: 1838.0) & (original description: Putative emb2734, Description = Importin-5, PFAM = PF00514;PF13646;PF02985)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold65452_316-9590' '(at5g07910 : 312.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30105.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35752 : 114.0) no description available & (reliability: 624.0) & (original description: Putative IRL7, Description = Plant intracellular Ras-group-related LRR protein 7, PFAM = PF13855)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold65572_981-6191' '(at4g02530 : 161.0) chloroplast thylakoid lumen protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 54 Blast hits to 54 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative At4g02530, Description = Thylakoid lumenal 16.5 kDa protein, chloroplastic, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold67206_2122-5456' '(gnl|cdd|66174 : 259.0) no description available & (at3g26040 : 231.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 2415 Blast hits to 2403 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 2353; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (o24645|hcbt1_diaca : 103.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 462.0) & (original description: Putative PGSC0003DMG400007171, Description = Salutaridinol 7-O-acetyltransferase, putative, PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold67426_3556-6975' '(at5g48440 : 102.0) FAD-dependent oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076); Has 4216 Blast hits to 4216 proteins in 1050 species: Archae - 57; Bacteria - 3005; Metazoa - 218; Fungi - 66; Plants - 52; Viruses - 0; Other Eukaryotes - 818 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative At5g48440, Description = Os09g0514100 protein, PFAM = PF01266)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold69294_1110-9474' '(at2g46060 : 751.0) transmembrane protein-related; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3522 (InterPro:IPR021910), EGF-like region, conserved site (InterPro:IPR013032); Has 154 Blast hits to 154 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 1502.0) & (original description: Putative BnaA05g05330D, Description = BnaA05g05330D protein, PFAM = PF12036)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold70128_3030-9118' '(at5g26610 : 259.0) D111/G-patch domain-containing protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), D111/G-patch (InterPro:IPR000467), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: suppressor of abi3-5 (TAIR:AT3G54230.1). & (reliability: 518.0) & (original description: Putative BnaA10g28330D, Description = BnaA10g28330D protein, PFAM = PF01585;PF12171)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold70403_4097-7946' '(at4g00905 : 267.0) NC domain-containing protein-related; CONTAINS InterPro DOMAIN/s: NC (InterPro:IPR007053); BEST Arabidopsis thaliana protein match is: NC domain-containing protein-related (TAIR:AT1G01225.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 534.0) & (original description: Putative BnaCnng08590D, Description = BnaCnng08590D protein, PFAM = PF04970)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold71132_1518-9043' '(at1g10095 : 388.0) Protein prenylyltransferase superfamily protein; FUNCTIONS IN: protein prenyltransferase activity; INVOLVED IN: protein amino acid prenylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein prenyltransferase (InterPro:IPR008940), Protein prenyltransferase, alpha subunit (InterPro:IPR002088); Has 876 Blast hits to 751 proteins in 162 species: Archae - 0; Bacteria - 0; Metazoa - 510; Fungi - 118; Plants - 152; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (reliability: 776.0) & (original description: Putative BnaC07g17910D, Description = BnaC07g17910D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold71253_3062-9017' '(at4g39970 : 399.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT3G48420.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30982 : 124.0) no description available & (gnl|cdd|38125 : 91.5) no description available & (reliability: 798.0) & (original description: Putative At4g39970, Description = Protein CbbY, PFAM = PF13419)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold71715_839-5139' '(at5g12460 : 389.0) Protein of unknown function (DUF604); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT2G37730.1); Has 562 Blast hits to 553 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 108; Fungi - 170; Plants - 273; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|68226 : 260.0) no description available & (gnl|cdd|37457 : 203.0) no description available & (reliability: 778.0) & (original description: Putative BnaC09g44220D, Description = BnaC09g44220D protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold72493_439-5932' '(at2g14880 : 142.0) SWIB/MDM2 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121), SWIB domain (InterPro:IPR019835); BEST Arabidopsis thaliana protein match is: SWIB/MDM2 domain superfamily protein (TAIR:AT4G34290.1); Has 1208 Blast hits to 1119 proteins in 254 species: Archae - 0; Bacteria - 214; Metazoa - 140; Fungi - 207; Plants - 389; Viruses - 11; Other Eukaryotes - 247 (source: NCBI BLink). & (gnl|cdd|37157 : 105.0) no description available & (gnl|cdd|85905 : 95.3) no description available & (reliability: 284.0) & (original description: Putative PGSC0003DMG400023191, Description = Wollemia nobilis Ref_Wollemi_Transcript_22316_713 transcribed RNA sequence, PFAM = PF02201)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold72675_1-8305' '(at3g51730 : 171.0) saposin B domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Saposin B (InterPro:IPR008139), Saposin-like (InterPro:IPR011001), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138); BEST Arabidopsis thaliana protein match is: saposin B domain-containing protein (TAIR:AT5G01800.1); Has 951 Blast hits to 460 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 738; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|36554 : 97.8) no description available & (reliability: 342.0) & (original description: Putative glysoja_001146, Description = Sulfated glycoprotein 1, PFAM = PF03489;PF05184;PF05184)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold73506_1-7563' '(at1g03270 : 444.0) CBS domain-containing protein with a domain of unknown function (DUF21); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein with a domain of unknown function (DUF21) (TAIR:AT4G14240.1); Has 10325 Blast hits to 10105 proteins in 2459 species: Archae - 102; Bacteria - 7685; Metazoa - 330; Fungi - 275; Plants - 225; Viruses - 0; Other Eukaryotes - 1708 (source: NCBI BLink). & (gnl|cdd|37329 : 281.0) no description available & (gnl|cdd|31445 : 127.0) no description available & (reliability: 842.0) & (original description: Putative dl3155c, Description = DUF21 domain-containing protein, PFAM = PF01595)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold75021_1-8174' '(at5g60590 : 343.0) DHBP synthase RibB-like alpha/beta domain; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sua5/YciO/YrdC/YwlC (InterPro:IPR004388), DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945), Sua5/YciO/YrdC, N-terminal (InterPro:IPR006070); BEST Arabidopsis thaliana protein match is: DHBP synthase RibB-like alpha/beta domain (TAIR:AT3G01920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30359 : 149.0) no description available & (gnl|cdd|38261 : 105.0) no description available & (reliability: 686.0) & (original description: Putative yrdc, Description = YrdC domain-containing protein, mitochondrial, PFAM = PF01300)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold75083_3420-8160' '(at1g13820 : 400.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G39220.1); Has 7432 Blast hits to 7419 proteins in 1219 species: Archae - 99; Bacteria - 5035; Metazoa - 262; Fungi - 72; Plants - 574; Viruses - 0; Other Eukaryotes - 1390 (source: NCBI BLink). & (gnl|cdd|36667 : 180.0) no description available & (gnl|cdd|30941 : 93.2) no description available & (reliability: 800.0) & (original description: Putative TIDP3447, Description = Putative hydrolase yugF, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold75581_4025-11572' '(at2g11000 : 340.0) Encodes a non-functional Arabidopsis homolog of the yeast protein MAK10, a component of the N-terminal acetyltransferase complex C. Mutant plants have normal photosynthesis as well as growth rates and pigmentation comparable to wild type.; MAK10 homologue (MAK10); FUNCTIONS IN: acetyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mak10 subunit, NatC N(alpha)-terminal acetyltransferase (InterPro:IPR007244); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37554 : 221.0) no description available & (gnl|cdd|67717 : 176.0) no description available & (reliability: 680.0) & (original description: Putative glysoja_022400, Description = N-alpha-acetyltransferase 35, NatC auxiliary subunit, PFAM = PF04112)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold76869_3610-5506' '(at5g19820 : 133.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37382 : 98.4) no description available & (reliability: 266.0) & (original description: Putative emb2734, Description = Importin-5, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold77310_1-7108' '(at1g18260 : 868.0) HCP-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein (TAIR:AT1G73570.1); Has 24350 Blast hits to 8436 proteins in 1359 species: Archae - 0; Bacteria - 17163; Metazoa - 848; Fungi - 960; Plants - 547; Viruses - 27; Other Eukaryotes - 4805 (source: NCBI BLink). & (gnl|cdd|36763 : 302.0) no description available & (gnl|cdd|31133 : 100.0) no description available & (reliability: 1736.0) & (original description: Putative HRD3A, Description = ERAD-associated E3 ubiquitin-protein ligase component HRD3A, PFAM = PF08238;PF08238;PF08238;PF08238;PF08238;PF08238;PF08238;PF08238;PF08238)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold77355_468-4439' '(gnl|cdd|66174 : 257.0) no description available & (at3g26040 : 211.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 2415 Blast hits to 2403 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 2353; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative ASAT3, Description = Acylsugar acyltransferase 3, PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold78972_1-3085' '(at1g03440 : 533.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT4G03010.1); Has 51202 Blast hits to 18238 proteins in 817 species: Archae - 16; Bacteria - 1653; Metazoa - 5878; Fungi - 321; Plants - 40223; Viruses - 0; Other Eukaryotes - 3111 (source: NCBI BLink). & (q8gt95|pgip1_orysa : 96.7) Polygalacturonase inhibitor 1 precursor (Polygalacturonase-inhibiting protein) (Floral organ regulator 1) - Oryza sativa (Rice) & (reliability: 1066.0) & (original description: Putative At1g03440, Description = Protein kinase (F21B7.6) like protein, PFAM = PF00560;PF13516;PF08263)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold80569_1673-7052' '(at2g40190 : 535.0) Encodes a putative alpha-1,2-mannosyltransferase in N-linked glycoprotein (homologous to yeast ALG11). Plays vital roles in cell-wall biosynthesis and abiotic stress response. Located in endoplasmic reticulum membrane.; LEAF WILTING 3 (LEW3); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G78800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36601 : 381.0) no description available & (gnl|cdd|30787 : 92.8) no description available & (reliability: 1070.0) & (original description: Putative alg11, Description = GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase, PFAM = PF15924;PF00534)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold81064_2629-5720' '(at5g05210 : 95.1) Surfeit locus protein 6; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Surfeit locus 6 (InterPro:IPR007019); BEST Arabidopsis thaliana protein match is: Surfeit locus protein 6 (TAIR:AT2G27750.1); Has 32234 Blast hits to 20830 proteins in 1371 species: Archae - 181; Bacteria - 3648; Metazoa - 13184; Fungi - 2634; Plants - 1078; Viruses - 135; Other Eukaryotes - 11374 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative BnaA03g55250D, Description = BnaA03g55250D protein, PFAM = PF04935;PF15459)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold82206_1-6745' '(at1g13820 : 401.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G39220.1); Has 7432 Blast hits to 7419 proteins in 1219 species: Archae - 99; Bacteria - 5035; Metazoa - 262; Fungi - 72; Plants - 574; Viruses - 0; Other Eukaryotes - 1390 (source: NCBI BLink). & (gnl|cdd|36667 : 154.0) no description available & (gnl|cdd|30941 : 80.9) no description available & (reliability: 802.0) & (original description: Putative At1g13820, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold84352_807-4912' '(at2g22400 : 291.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, RNA binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678), Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site (InterPro:IPR018314); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G40000.1); Has 8976 Blast hits to 8942 proteins in 2412 species: Archae - 298; Bacteria - 6215; Metazoa - 583; Fungi - 307; Plants - 251; Viruses - 0; Other Eukaryotes - 1322 (source: NCBI BLink). & (reliability: 582.0) & (original description: Putative At2g22400, Description = tRNA (Cytosine(34)-C(5))-methyltransferase, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold86622_3876-5977' '(at1g76340 : 533.0) Encodes a nucleotide-sugar transporter.; golgi nucleotide sugar transporter 3 (GONST3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: golgi nucleotide sugar transporter 4 (TAIR:AT5G19980.1); Has 1377 Blast hits to 1372 proteins in 233 species: Archae - 0; Bacteria - 8; Metazoa - 324; Fungi - 246; Plants - 675; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36657 : 282.0) no description available & (reliability: 1066.0) & (original description: Putative GONST3, Description = GDP-mannose transporter GONST3, PFAM = PF03151)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold87412_1-3043' '(at2g36100 : 177.0) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT3G11550.1); Has 599 Blast hits to 599 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 599; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68120 : 128.0) no description available & (reliability: 354.0) & (original description: Putative STG, Description = CASP-like protein, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold89008_292-5594' '(at1g54380 : 84.7) spliceosome protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Survival motor neuron interacting protein 1 (InterPro:IPR007022); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42510.2); Has 222 Blast hits to 205 proteins in 80 species: Archae - 0; Bacteria - 6; Metazoa - 98; Fungi - 6; Plants - 54; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative PGSC0003DMG400021611, Description = Gem-associated 2, PFAM = PF04938)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold90092_1-4492' '(at3g48195 : 624.0) Phox (PX) domain-containing protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: intracellular signaling pathway, cell communication; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Phox-like (InterPro:IPR001683); Has 654 Blast hits to 601 proteins in 103 species: Archae - 0; Bacteria - 16; Metazoa - 551; Fungi - 11; Plants - 27; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|37040 : 201.0) no description available & (reliability: 1248.0) & (original description: Putative LOC100502187, Description = Phox (PX) domain protein, PFAM = PF00787;PF13901)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold91972_1-5131' '(at1g10950 : 557.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis.; transmembrane nine 1 (TMN1); LOCATED IN: integral to membrane, Golgi apparatus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G37310.1); Has 1611 Blast hits to 1538 proteins in 326 species: Archae - 0; Bacteria - 16; Metazoa - 610; Fungi - 273; Plants - 454; Viruses - 0; Other Eukaryotes - 258 (source: NCBI BLink). & (gnl|cdd|36491 : 549.0) no description available & (gnl|cdd|66650 : 395.0) no description available & (reliability: 1114.0) & (original description: Putative tm9sf3, Description = Transmembrane 9 superfamily member, PFAM = PF02990)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold94032_1-4823' '(at1g14620 : 303.0) DECOY (DECOY); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L46 (InterPro:IPR021757); Has 231 Blast hits to 231 proteins in 117 species: Archae - 0; Bacteria - 2; Metazoa - 68; Fungi - 103; Plants - 44; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|39748 : 164.0) no description available & (reliability: 606.0) & (original description: Putative DECOY, Description = At1g14620/T5E21_15, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold96325_778-4510' '(at5g19290 : 493.0) alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G14980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36668 : 373.0) no description available & (gnl|cdd|32448 : 130.0) no description available & (reliability: 986.0) & (original description: Putative At5g19290, Description = Esterase/lipase/thioesterase family protein, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold104240_1-3543' '(at5g12460 : 400.0) Protein of unknown function (DUF604); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT2G37730.1); Has 562 Blast hits to 553 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 108; Fungi - 170; Plants - 273; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|68226 : 243.0) no description available & (gnl|cdd|37457 : 170.0) no description available & (reliability: 800.0) & (original description: Putative BnaA10g29930D, Description = BnaA10g29930D protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold107564_648-3151' '(at4g11655 : 124.0) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G36330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative At4g11655, Description = CASP-like protein 4A4, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold112840_3-2697' '(at1g35510 : 745.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G01480.1); Has 838 Blast hits to 827 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 838; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 418.0) no description available & (reliability: 1490.0) & (original description: Putative At1g35510, Description = O-fucosyltransferase-like protein, PFAM = PF10250)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold112919_1-2691' '(at1g30890 : 184.0) Integral membrane HRF1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Hrf1 (InterPro:IPR005578); BEST Arabidopsis thaliana protein match is: Integral membrane HRF1 family protein (TAIR:AT3G59500.1); Has 474 Blast hits to 474 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 204; Fungi - 142; Plants - 75; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|38304 : 148.0) no description available & (gnl|cdd|67490 : 139.0) no description available & (reliability: 368.0) & (original description: Putative BD2, Description = Integral membrane HRF1 family protein, PFAM = PF03878)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold115794_1-2471' '(at3g21290 : 135.0) dentin sialophosphoprotein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Occludin/RNA polymerase II elongation factor, ELL domain (InterPro:IPR010844); Has 17175 Blast hits to 8691 proteins in 788 species: Archae - 88; Bacteria - 6651; Metazoa - 4182; Fungi - 1520; Plants - 456; Viruses - 109; Other Eukaryotes - 4169 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative BnaA05g36720D, Description = BnaA05g36720D protein, PFAM = PF07303)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold117448_1-2351' '(at2g37730 : 164.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT3G11420.1); Has 511 Blast hits to 500 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 144; Plants - 279; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|68226 : 128.0) no description available & (reliability: 328.0) & (original description: Putative AT2G37730, Description = Fringe-related family protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'nbv0.3scaffold119418_300-2215' '(at4g10650 : 108.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G41670.1); Has 3555 Blast hits to 3555 proteins in 1390 species: Archae - 105; Bacteria - 2228; Metazoa - 282; Fungi - 444; Plants - 117; Viruses - 0; Other Eukaryotes - 379 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative DGP2, Description = Ribosome biogenesis GTPase A, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold7_1436412-1441982' '(at5g19820 : 221.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37382 : 116.0) no description available & (reliability: 442.0) & (original description: Putative emb2734, Description = Importin-5, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold9_1947494-1960103' '(at1g44910 : 493.0) Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries.; pre-mRNA-processing protein 40A (PRP40A); CONTAINS InterPro DOMAIN/s: FF domain (InterPro:IPR002713), WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: pre-mRNA-processing protein 40B (TAIR:AT3G19670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35374 : 231.0) no description available & (gnl|cdd|34707 : 102.0) no description available & (reliability: 986.0) & (original description: Putative Med35, Description = Pre-mRNA-processing protein 40A, PFAM = PF01846;PF01846;PF01846;PF01846;PF00397)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold28_673265-681466' '(at3g60070 : 472.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G44280.2); Has 1328 Blast hits to 1310 proteins in 435 species: Archae - 0; Bacteria - 1041; Metazoa - 121; Fungi - 3; Plants - 58; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|40027 : 355.0) no description available & (reliability: 944.0) & (original description: Putative BnaC04g22460D, Description = BnaC04g22460D protein, PFAM = PF13347)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold34_464541-487057' '(at2g41050 : 276.0) PQ-loop repeat family protein / transmembrane family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cystinosin/ERS1p repeat (InterPro:IPR006603); BEST Arabidopsis thaliana protein match is: PQ-loop repeat family protein / transmembrane family protein (TAIR:AT4G36850.1); Has 930 Blast hits to 673 proteins in 160 species: Archae - 0; Bacteria - 0; Metazoa - 218; Fungi - 545; Plants - 89; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (gnl|cdd|38124 : 94.3) no description available & (reliability: 552.0) & (original description: Putative At2g41050, Description = PQ-loop repeat family protein / transmembrane family protein, PFAM = PF04193;PF04193)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold43_780935-787641' '(at5g46150 : 155.0) LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284, transmembrane eukaryotic (InterPro:IPR005045); BEST Arabidopsis thaliana protein match is: ALA-interacting subunit 1 (TAIR:AT3G12740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38163 : 131.0) no description available & (reliability: 310.0) & (original description: Putative LEM3, Description = ALA-interacting subunit 3, PFAM = PF03381)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold56_1586828-1598957' '(at2g40190 : 655.0) Encodes a putative alpha-1,2-mannosyltransferase in N-linked glycoprotein (homologous to yeast ALG11). Plays vital roles in cell-wall biosynthesis and abiotic stress response. Located in endoplasmic reticulum membrane.; LEAF WILTING 3 (LEW3); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G78800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36601 : 468.0) no description available & (gnl|cdd|30787 : 93.9) no description available & (reliability: 1310.0) & (original description: Putative ALG11, Description = GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase, PFAM = PF15924;PF00534)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold69_1234627-1238927' '(at5g60050 : 514.0) BTB/POZ domain-containing protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G63850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1028.0) & (original description: Putative At5g60050, Description = BTB/POZ domain-containing protein At5g60050, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold73_946323-956220' '(at1g56290 : 158.0) CwfJ-like family protein; CONTAINS InterPro DOMAIN/s: Cwf19-like, C-terminal domain-1 (InterPro:IPR006768), Cwf19-like protein, C-terminal domain-2 (InterPro:IPR006767); BEST Arabidopsis thaliana protein match is: CwfJ-like family protein / zinc finger (CCCH-type) family protein (TAIR:AT5G56900.2); Has 2474 Blast hits to 2009 proteins in 284 species: Archae - 2; Bacteria - 39; Metazoa - 1047; Fungi - 300; Plants - 173; Viruses - 2; Other Eukaryotes - 911 (source: NCBI BLink). & (gnl|cdd|37688 : 130.0) no description available & (gnl|cdd|86707 : 83.1) no description available & (reliability: 316.0) & (original description: Putative v1g180108, Description = CwfJ-like protein, PFAM = PF04677;PF04676)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold93_785318-791388' '(at2g44920 : 183.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentapeptide repeat (InterPro:IPR001646); BEST Arabidopsis thaliana protein match is: Pentapeptide repeat-containing protein (TAIR:AT1G12250.1); Has 15593 Blast hits to 6460 proteins in 916 species: Archae - 263; Bacteria - 11679; Metazoa - 260; Fungi - 2; Plants - 261; Viruses - 44; Other Eukaryotes - 3084 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative HB26, Description = Putative homeobox DNA-binding domain superfamily protein, PFAM = PF00805)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold107_1138907-1160221' '(at2g39805 : 303.0) Integral membrane Yip1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Yip1 domain (InterPro:IPR006977); BEST Arabidopsis thaliana protein match is: Integral membrane Yip1 family protein (TAIR:AT5G27490.1); Has 446 Blast hits to 445 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 176; Fungi - 103; Plants - 92; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|38324 : 121.0) no description available & (gnl|cdd|86741 : 86.5) no description available & (reliability: 606.0) & (original description: Putative pco079728, Description = Protein YIPF, PFAM = PF04893)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold112_658153-683862' '(at3g56900 : 488.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 4015 Blast hits to 2516 proteins in 309 species: Archae - 52; Bacteria - 1176; Metazoa - 1329; Fungi - 813; Plants - 363; Viruses - 0; Other Eukaryotes - 282 (source: NCBI BLink). & (gnl|cdd|37350 : 332.0) no description available & (reliability: 976.0) & (original description: Putative Os12g0129400, Description = Os12g0129400 protein, PFAM = PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold125_120492-141254' '(at4g21220 : 344.0) Trimeric LpxA-like enzymes superfamily protein; FUNCTIONS IN: transferase activity; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: Trimeric LpxA-like enzymes superfamily protein (TAIR:AT4G05210.1); Has 11236 Blast hits to 11169 proteins in 1804 species: Archae - 57; Bacteria - 7331; Metazoa - 7; Fungi - 9; Plants - 63; Viruses - 0; Other Eukaryotes - 3769 (source: NCBI BLink). & (gnl|cdd|80772 : 260.0) no description available & (reliability: 688.0) & (original description: Putative LPXD2, Description = Probable UDP-3-O-acylglucosamine N-acyltransferase 2, mitochondrial, PFAM = PF00132;PF00132)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold138_402247-407733' '(at3g16310 : 357.0) mitotic phosphoprotein N' end (MPPN) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: MPPN (InterPro:IPR007846), Nucleoporin, NUP53 (InterPro:IPR017389); Has 220 Blast hits to 220 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 5; Plants - 57; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|39486 : 189.0) no description available & (gnl|cdd|68734 : 116.0) no description available & (reliability: 714.0) & (original description: Putative NUP35, Description = Nuclear pore complex protein NUP35, PFAM = PF05172)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold139_7550-11324' '(gnl|cdd|86752 : 147.0) no description available & (at2g27740 : 129.0) Family of unknown function (DUF662) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF662 (InterPro:IPR007033); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF662) (TAIR:AT2G36410.2); Has 1272 Blast hits to 1189 proteins in 227 species: Archae - 42; Bacteria - 139; Metazoa - 529; Fungi - 66; Plants - 146; Viruses - 5; Other Eukaryotes - 345 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative At2g27740, Description = At2g27740, PFAM = PF04949)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold175_984745-1017325' '(at1g30540 : 238.0) Actin-like ATPase superfamily protein; CONTAINS InterPro DOMAIN/s: ATPase, BadF/BadG/BcrA/BcrD type (InterPro:IPR002731); Has 1833 Blast hits to 1833 proteins in 714 species: Archae - 64; Bacteria - 1392; Metazoa - 117; Fungi - 35; Plants - 122; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|37005 : 150.0) no description available & (gnl|cdd|85732 : 86.6) no description available & (reliability: 476.0) & (original description: Putative Os07g0147700, Description = N-acetyl-D-glucosamine kinase, PFAM = PF01869;PF01869)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold188_564595-590797' '(at2g30720 : 493.0) Thioesterase/thiol ester dehydrase-isomerase superfamily protein; BEST Arabidopsis thaliana protein match is: Thioesterase/thiol ester dehydrase-isomerase superfamily protein (TAIR:AT5G48370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37974 : 293.0) no description available & (gnl|cdd|48037 : 114.0) no description available & (reliability: 986.0) & (original description: Putative BnaCnng69840D, Description = BnaCnng69840D protein, PFAM = PF03061)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold193_343834-350959' '(at4g10050 : 238.0) esterase/lipase/thioesterase family protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073), Protein phosphatase methylesterase, eukaryotic (InterPro:IPR016812); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37775 : 174.0) no description available & (reliability: 476.0) & (original description: Putative ppe1, Description = PME-1, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold193_602677-605621' '(at3g26040 : 144.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 2415 Blast hits to 2403 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 2353; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|66174 : 142.0) no description available & (reliability: 288.0) & (original description: Putative AAT4, Description = Salutaridinol 7-O-acetyltransferase, PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold194_356454-369346' '(at5g38360 : 296.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 14 (TAIR:AT1G33990.1); Has 2073 Blast hits to 2071 proteins in 500 species: Archae - 14; Bacteria - 1119; Metazoa - 146; Fungi - 52; Plants - 356; Viruses - 0; Other Eukaryotes - 386 (source: NCBI BLink). & (reliability: 592.0) & (original description: Putative CGLD7, Description = Esterase-like protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold195_720541-794609' '(at5g62865 : 82.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48020.1). & (reliability: 160.2) & (original description: Putative , Description = NHL domain-containing protein, putative, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold216_869584-932271' '(at3g04490 : 1346.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38092.1); Has 75 Blast hits to 64 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 36; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|39741 : 539.0) no description available & (reliability: 2692.0) & (original description: Putative Sb01g019330, Description = Putative uncharacterized protein Sb01g019330, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold221_161614-164715' '(at3g26510 : 134.0) Octicosapeptide/Phox/Bem1p family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: octicosapeptide/Phox/Bem1p (PB1) domain-containing protein (TAIR:AT1G70640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative ZOSMA_63G00310, Description = Octicosapeptide/Phox/Bem1p domain-containing protein kinase, PFAM = PF00564)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold225_157051-160538' '(at5g65170 : 82.0) VQ motif-containing protein; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT1G35830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative , Description = , PFAM = PF05678)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold235_182879-188592' '(at4g21585 : 167.0) Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro.; endonuclease 4 (ENDO4); FUNCTIONS IN: endonuclease activity, nucleic acid binding; INVOLVED IN: DNA catabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Phospholipase C/P1 nuclease, core (InterPro:IPR008947), S1/P1 nuclease (InterPro:IPR003154); BEST Arabidopsis thaliana protein match is: endonuclease 5 (TAIR:AT4G21600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85937 : 145.0) no description available & (reliability: 334.0) & (original description: Putative hbn1, Description = Nuclease PA3, PFAM = PF02265;PF02265)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold244_654241-658146' '(at5g57170 : 176.0) Tautomerase/MIF superfamily protein; INVOLVED IN: inflammatory response, response to other organism; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tautomerase (InterPro:IPR014347), Macrophage migration inhibitory factor (InterPro:IPR001398); BEST Arabidopsis thaliana protein match is: Tautomerase/MIF superfamily protein (TAIR:AT5G01650.2). & (gnl|cdd|36970 : 138.0) no description available & (gnl|cdd|85294 : 85.7) no description available & (reliability: 352.0) & (original description: Putative At5g01650, Description = Macrophage migration inhibitory factor like, PFAM = PF01187)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold263_58688-82200' '(at1g06560 : 704.0) NOL1/NOP2/sun family protein; FUNCTIONS IN: methyltransferase activity, RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site (InterPro:IPR018314), Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G26600.1); Has 13569 Blast hits to 8411 proteins in 2331 species: Archae - 604; Bacteria - 9970; Metazoa - 826; Fungi - 418; Plants - 360; Viruses - 0; Other Eukaryotes - 1391 (source: NCBI BLink). & (gnl|cdd|36338 : 206.0) no description available & (gnl|cdd|30493 : 107.0) no description available & (reliability: 1408.0) & (original description: Putative nsun6, Description = Putative methyltransferase NSUN6, PFAM = PF01472;PF01189;PF01189)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold264_459721-474819' '(at1g35470 : 514.0) SPla/RYanodine receptor (SPRY) domain-containing protein; CONTAINS InterPro DOMAIN/s: B302 (SPRY)-like (InterPro:IPR001870), CTLH, C-terminal LisH motif (InterPro:IPR006595), SPla/RYanodine receptor SPRY (InterPro:IPR003877), Ran binding protein, CRA domain (InterPro:IPR019589), SPla/RYanodine receptor subgroup (InterPro:IPR018355), LisH dimerisation motif (InterPro:IPR006594), Ran binding protein-like, CRA domain (InterPro:IPR013144); BEST Arabidopsis thaliana protein match is: SPla/RYanodine receptor (SPRY) domain-containing protein (TAIR:AT4G09340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36690 : 275.0) no description available & (gnl|cdd|84907 : 96.6) no description available & (reliability: 1028.0) & (original description: Putative PniSPRY1, Description = SPla/RYanodine receptor (SPRY) domain-containing protein, PFAM = PF10607;PF00622)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold265_216247-222280' '(at1g80500 : 192.0) SNARE-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, ER to Golgi vesicle-mediated transport; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sedlin (InterPro:IPR006722), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT2G20930.1); Has 584 Blast hits to 580 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 289; Fungi - 112; Plants - 97; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|38697 : 140.0) no description available & (gnl|cdd|86702 : 127.0) no description available & (reliability: 384.0) & (original description: Putative Trs20, Description = Probable trafficking protein particle complex subunit 2, PFAM = PF04628)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold273_876654-896476' '(at2g39340 : 669.0) SAC3/GANP/Nin1/mts3/eIF-3 p25 family; CONTAINS InterPro DOMAIN/s: SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37072 : 361.0) no description available & (gnl|cdd|67037 : 162.0) no description available & (reliability: 1338.0) & (original description: Putative Os05g0462600, Description = Os05g0462600 protein, PFAM = PF03399)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold281_477864-605593' '(gnl|cdd|66174 : 135.0) no description available & (at3g26040 : 114.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 2415 Blast hits to 2403 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 2353; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative catf2, Description = Acyl-transferase, PFAM = PF02458;PF02458)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold282_753161-756221' '(at4g23930 : 125.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT1G64450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative BnaA09g12240D, Description = BnaA09g12240D protein, PFAM = PF03168)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold342_614400-630352' '(at5g35560 : 895.0) DENN (AEX-3) domain-containing protein; CONTAINS InterPro DOMAIN/s: uDENN (InterPro:IPR005113), dDENN (InterPro:IPR005112), DENN (InterPro:IPR001194); BEST Arabidopsis thaliana protein match is: DENN (AEX-3) domain-containing protein (TAIR:AT2G20320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85886 : 88.4) no description available & (gnl|cdd|38777 : 83.4) no description available & (reliability: 1790.0) & (original description: Putative MTR_2g041470, Description = DENN (AEX-3) domain protein, PFAM = PF02141;PF03456)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold349_129591-136191' '(at4g24930 : 196.0) thylakoid lumenal 17.9 kDa protein, chloroplast; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 48 Blast hits to 48 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative At4g24930, Description = Thylakoid lumenal 17.9 kDa protein, chloroplastic, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold352_231638-238717' '(at2g28390 : 549.0) SAND family protein; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar fusion protein MON1 (InterPro:IPR004353); Has 753 Blast hits to 594 proteins in 226 species: Archae - 6; Bacteria - 38; Metazoa - 289; Fungi - 213; Plants - 47; Viruses - 3; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|66814 : 223.0) no description available & (gnl|cdd|36215 : 211.0) no description available & (reliability: 1098.0) & (original description: Putative PHYPADRAFT_209622, Description = Predicted protein, PFAM = PF03164)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold363_270198-294644' '(at5g51400 : 320.0) PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT2G45010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86720 : 91.9) no description available & (reliability: 614.0) & (original description: Putative CNR6, Description = Cell number regulator 6, PFAM = PF04749)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold410_504189-510571' '(at1g15440 : 1349.0) periodic tryptophan protein 2 (PWP2); FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Small-subunit processome, Utp12 (InterPro:IPR007148), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G11160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35512 : 1093.0) no description available & (gnl|cdd|29257 : 176.0) no description available & (p93107|pf20_chlre : 98.2) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 2698.0) & (original description: Putative PWP2, Description = Periodic tryptophan protein 2 homolog, PFAM = PF04003;PF00400;PF00400;PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold415_167203-175025' '(at5g14030 : 200.0) translocon-associated protein beta (TRAPB) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translocon-associated beta (InterPro:IPR008856); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38527 : 153.0) no description available & (gnl|cdd|69286 : 142.0) no description available & (reliability: 400.0) & (original description: Putative PGSC0003DMG400020198, Description = Translocon-associated protein subunit beta, PFAM = PF05753)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold457_353157-421351' '(at1g61900 : 432.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30700.1). & (reliability: 864.0) & (original description: Putative At1g61900, Description = BnaA03g14090D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold462_136020-163650' '(at5g19390 : 910.0) Encodes a protein with similarity to REN1, a Rho GTPase activating protein.; Rho GTPase activation protein (RhoGAP) with PH domain; FUNCTIONS IN: Rho GTPase activator activity, phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Rho GTPase activation protein (InterPro:IPR008936), Pleckstrin homology (InterPro:IPR001849), RhoGAP (InterPro:IPR000198); BEST Arabidopsis thaliana protein match is: Rho GTPase activation protein (RhoGAP) with PH domain (TAIR:AT5G12150.2); Has 4185 Blast hits to 4168 proteins in 202 species: Archae - 0; Bacteria - 9; Metazoa - 3193; Fungi - 416; Plants - 210; Viruses - 0; Other Eukaryotes - 357 (source: NCBI BLink). & (gnl|cdd|39472 : 461.0) no description available & (gnl|cdd|84905 : 131.0) no description available & (reliability: 1820.0) & (original description: Putative ROPGAP7, Description = Rho GTPase-activating protein 7, PFAM = PF00620;PF00169;PF14389)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold481_76333-82001' '(at5g18540 : 87.8) unknown protein; Has 1784 Blast hits to 634 proteins in 116 species: Archae - 0; Bacteria - 0; Metazoa - 1013; Fungi - 200; Plants - 288; Viruses - 0; Other Eukaryotes - 283 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative PGSC0003DMG400010658, Description = BnaA02g35110D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold511_632128-647303' '(at1g80810 : 134.0) Tudor/PWWP/MBT superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1); Has 103396 Blast hits to 54411 proteins in 2510 species: Archae - 599; Bacteria - 9234; Metazoa - 41155; Fungi - 13255; Plants - 5790; Viruses - 1058; Other Eukaryotes - 32305 (source: NCBI BLink). & (gnl|cdd|36738 : 106.0) no description available & (reliability: 268.0) & (original description: Putative At1g15940, Description = Putative ovule protein, PFAM = PF05278)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold523_242895-246518' '(at5g62740 : 503.0) HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1 (HIR1); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT1G69840.7); Has 5648 Blast hits to 5647 proteins in 1784 species: Archae - 171; Bacteria - 3783; Metazoa - 267; Fungi - 306; Plants - 270; Viruses - 3; Other Eukaryotes - 848 (source: NCBI BLink). & (gnl|cdd|37831 : 380.0) no description available & (gnl|cdd|48219 : 357.0) no description available & (reliability: 1006.0) & (original description: Putative HIR1, Description = Hypersensitive-induced response protein 1, PFAM = PF01145)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold543_1030558-1038955' '(at4g17180 : 577.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 2802 Blast hits to 2733 proteins in 160 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 65; Plants - 2718; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|84700 : 182.0) no description available & (p52409|e13b_wheat : 163.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1154.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF00332;PF07983)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold554_243305-255078' '(at1g22930 : 776.0) T-complex protein 11; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: T-complex 11 (InterPro:IPR008862); BEST Arabidopsis thaliana protein match is: T-complex protein 11 (TAIR:AT4G09150.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37192 : 242.0) no description available & (gnl|cdd|69326 : 197.0) no description available & (reliability: 1552.0) & (original description: Putative Os04g0439100, Description = Os04g0439100 protein, PFAM = PF05794;PF05794)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold564_340418-343563' '(at5g38520 : 429.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G19850.1); Has 8675 Blast hits to 8672 proteins in 1315 species: Archae - 112; Bacteria - 5902; Metazoa - 505; Fungi - 108; Plants - 578; Viruses - 6; Other Eukaryotes - 1464 (source: NCBI BLink). & (gnl|cdd|36667 : 163.0) no description available & (gnl|cdd|30941 : 102.0) no description available & (reliability: 858.0) & (original description: Putative tlr1892, Description = Tlr1892 protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold585_653875-657910' '(at2g33550 : 267.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT4G31270.1); Has 743 Blast hits to 735 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 8; Plants - 568; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (reliability: 534.0) & (original description: Putative ASR3, Description = Trihelix transcription factor ASR3, PFAM = PF13837)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold614_128863-135781' '(at1g63980 : 277.0) D111/G-patch domain-containing protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D111/G-patch (InterPro:IPR000467); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38020 : 111.0) no description available & (reliability: 554.0) & (original description: Putative Sb01g048840, Description = Putative uncharacterized protein Sb01g048840, PFAM = PF01585)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold712_354332-368490' '(at1g27760 : 535.0) Encodes a protein with similarity to human interferon-related developmental regulator (IFRD)that is involved in salt tolerance. Loss of function mutations are hypersensitive to salt stress and have reduced fertility. SAT32 is found in the cytoplasm but appears to translocate to the nucleus when plants are subject to salt stress.; SALT-TOLERANCE 32 (SAT32); FUNCTIONS IN: binding; INVOLVED IN: response to salt stress; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Interferon-related developmental regulator, N-terminal (InterPro:IPR007701), Interferon-related developmental regulator, C-terminal (InterPro:IPR006921), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68573 : 197.0) no description available & (gnl|cdd|38053 : 134.0) no description available & (reliability: 1070.0) & (original description: Putative SAT32, Description = Protein salt tolerance 32, PFAM = PF04836;PF05004)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold774_57684-84676' '(at5g17250 : 890.0) Alkaline-phosphatase-like family protein; FUNCTIONS IN: transferase activity, catalytic activity; INVOLVED IN: GPI anchor biosynthetic process, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase (InterPro:IPR002591), Alkaline-phosphatase-like, core domain (InterPro:IPR017850); BEST Arabidopsis thaliana protein match is: Alkaline-phosphatase-like family protein (TAIR:AT2G22530.1); Has 1431 Blast hits to 1201 proteins in 306 species: Archae - 0; Bacteria - 228; Metazoa - 476; Fungi - 488; Plants - 85; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink). & (gnl|cdd|37337 : 509.0) no description available & (reliability: 1780.0) & (original description: Putative gpi13, Description = GPI ethanolamine phosphate transferase 3, PFAM = PF01663)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold810_584262-596474' '(at5g65290 : 752.0) LMBR1-like membrane protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: LMBR1-like membrane protein, conserved region (InterPro:IPR006876); Has 378 Blast hits to 361 proteins in 164 species: Archae - 0; Bacteria - 1; Metazoa - 119; Fungi - 103; Plants - 62; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|37507 : 461.0) no description available & (reliability: 1504.0) & (original description: Putative Os02g0758100, Description = LMBR1 integral membrane protein-like, PFAM = PF04791)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold811_429247-435102' '(at4g14310 : 739.0) Transducin/WD40 repeat-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: male gametophyte; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046); Has 1761 Blast hits to 1518 proteins in 267 species: Archae - 12; Bacteria - 193; Metazoa - 625; Fungi - 156; Plants - 91; Viruses - 5; Other Eukaryotes - 679 (source: NCBI BLink). & (reliability: 1478.0) & (original description: Putative At4g14310, Description = Transducin/WD40 domain-containing protein-like protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold851_139978-151960' '(at1g61900 : 422.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30700.1). & (reliability: 844.0) & (original description: Putative Sb02g000365, Description = Putative uncharacterized protein Sb02g000365, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold885_455230-479270' '(at1g19100 : 642.0) Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (TAIR:AT4G36280.1); Has 533 Blast hits to 518 proteins in 94 species: Archae - 0; Bacteria - 53; Metazoa - 227; Fungi - 0; Plants - 195; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|37056 : 264.0) no description available & (reliability: 1284.0) & (original description: Putative MORC6, Description = Protein MICRORCHIDIA 6, PFAM = PF13589)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold905_246383-252304' '(at1g52870 : 466.0) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT4G03410.2); Has 1371 Blast hits to 1369 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 561; Fungi - 316; Plants - 329; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (gnl|cdd|37155 : 118.0) no description available & (reliability: 932.0) & (original description: Putative BnaA06g01790D, Description = BnaA06g01790D protein, PFAM = PF04117)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold920_186443-199417' '(at4g27860 : 155.0) vacuolar iron transporter (VIT) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: embryo, hypocotyl, root, pedicel, leaf; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217), Cytokine, IL-1-like (InterPro:IPR008996); BEST Arabidopsis thaliana protein match is: Vacuolar iron transporter (VIT) family protein (TAIR:AT4G27870.1). & (gnl|cdd|85817 : 84.6) no description available & (reliability: 310.0) & (original description: Putative MEB1, Description = Vacuolar iron transporter-like protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold946_438729-444216' '(at2g04560 : 488.0) transferases, transferring glycosyl groups; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid A biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 19 (InterPro:IPR003835); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80456 : 287.0) no description available & (reliability: 976.0) & (original description: Putative LPXB, Description = Probable lipid-A-disaccharide synthase, mitochondrial, PFAM = PF02684)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold957_136510-142165' '(at5g09430 : 352.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G39955.1); Has 8280 Blast hits to 8277 proteins in 1491 species: Archae - 97; Bacteria - 6100; Metazoa - 351; Fungi - 79; Plants - 382; Viruses - 0; Other Eukaryotes - 1271 (source: NCBI BLink). & (gnl|cdd|36667 : 172.0) no description available & (gnl|cdd|30941 : 104.0) no description available & (reliability: 704.0) & (original description: Putative BnaA10g22540D, Description = BnaA10g22540D protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold962_203356-218241' '(at3g24090 : 906.0) glutamine-fructose-6-phosphate transaminase (isomerizing)s;sugar binding;transaminases; FUNCTIONS IN: sugar binding, transaminase activity, glutamine-fructose-6-phosphate transaminase (isomerizing) activity; INVOLVED IN: carbohydrate biosynthetic process, carbohydrate metabolic process, metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Sugar isomerase (SIS) (InterPro:IPR001347), Glucosamine-fructose-6-phosphate aminotransferase, isomerising (InterPro:IPR005855), Glutamine amidotransferase, type II (InterPro:IPR017932); Has 19000 Blast hits to 18984 proteins in 2800 species: Archae - 500; Bacteria - 10467; Metazoa - 411; Fungi - 223; Plants - 106; Viruses - 14; Other Eukaryotes - 7279 (source: NCBI BLink). & (gnl|cdd|36482 : 603.0) no description available & (gnl|cdd|30798 : 550.0) no description available & (reliability: 1812.0) & (original description: Putative glmS, Description = Glutamine--fructose-6-phosphate aminotransferase [isomerizing], PFAM = PF13522;PF01380;PF01380)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold963_510058-523343' '(at3g47560 : 367.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S33, tripeptidyl-peptidase C-terminal (InterPro:IPR013595); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G29840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39866 : 353.0) no description available & (reliability: 734.0) & (original description: Putative At3g47560, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold967_49884-55466' '(at4g13600 : 139.0) Carbohydrate-binding X8 domain superfamily protein; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: plasmodesmata callose-binding protein 3 (TAIR:AT1G18650.1); Has 487 Blast hits to 485 proteins in 21 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 8; Plants - 474; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 113.0) no description available & (p52409|e13b_wheat : 89.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 278.0) & (original description: Putative PDCB3, Description = CBM43-containing protein, PFAM = PF07983)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold969_2447-6516' '(at1g03910 : 665.0) EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cactin protein, cactus-binding domain, C-terminal (InterPro:IPR019134), Cactin, central region (InterPro:IPR018816); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36815.2). & (gnl|cdd|37581 : 532.0) no description available & (reliability: 1330.0) & (original description: Putative CTN, Description = Uncharacterized protein C19orf29, PFAM = PF09732;PF10312)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold989_2935-14446' '(at5g13020 : 305.0) Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), ENT (InterPro:IPR005491); BEST Arabidopsis thaliana protein match is: Emsy N Terminus (ENT) domain-containing protein (TAIR:AT2G44440.1); Has 417 Blast hits to 397 proteins in 49 species: Archae - 0; Bacteria - 2; Metazoa - 101; Fungi - 4; Plants - 307; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|39874 : 165.0) no description available & (gnl|cdd|67356 : 106.0) no description available & (reliability: 610.0) & (original description: Putative rif1, Description = Emsy N Terminus/ plant Tudor-like domains-containing protein isoform 1, PFAM = PF03735)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1002_176544-193753' '(at1g68080 : 355.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39660 : 107.0) no description available & (reliability: 710.0) & (original description: Putative At1g68080, Description = 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein, PFAM = PF13640)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1006_75854-91465' '(at3g60260 : 449.0) ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT2G44770.1); Has 836 Blast hits to 836 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 495; Fungi - 36; Plants - 182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|38208 : 303.0) no description available & (gnl|cdd|68305 : 229.0) no description available & (reliability: 898.0) & (original description: Putative MTR_3g085460, Description = ELMO/CED-12 family protein, PFAM = PF04727)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1038_206378-331842' '(at3g45740 : 495.0) hydrolase family protein / HAD-superfamily protein; FUNCTIONS IN: copper ion binding, zinc ion binding; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIA, CECR5 (InterPro:IPR006353), HAD-superfamily hydrolase, subfamily IIA (InterPro:IPR006357); Has 548 Blast hits to 526 proteins in 159 species: Archae - 8; Bacteria - 6; Metazoa - 128; Fungi - 307; Plants - 36; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|36831 : 354.0) no description available & (gnl|cdd|30992 : 91.8) no description available & (reliability: 990.0) & (original description: Putative Sb01g038800, Description = Putative uncharacterized protein Sb01g038800, PFAM = PF13344;PF13242)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1049_64117-135799' '(at4g27860 : 121.0) vacuolar iron transporter (VIT) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: embryo, hypocotyl, root, pedicel, leaf; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217), Cytokine, IL-1-like (InterPro:IPR008996); BEST Arabidopsis thaliana protein match is: Vacuolar iron transporter (VIT) family protein (TAIR:AT4G27870.1). & (reliability: 242.0) & (original description: Putative BnaA01g16690D, Description = BnaA01g16690D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1080_838091-844764' '(at2g40935 : 223.0) PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT3G18470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86720 : 96.9) no description available & (reliability: 446.0) & (original description: Putative PCR10, Description = Protein PLANT CADMIUM RESISTANCE 10, PFAM = PF04749)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1145_358754-362685' '(p59234|yipl_soltu : 190.0) Protein yippee-like - Solanum tuberosum (Potato) & (at2g40110 : 159.0) Yippee family putative zinc-binding protein; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: Yippee family putative zinc-binding protein (TAIR:AT3G08990.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38609 : 128.0) no description available & (gnl|cdd|66871 : 96.1) no description available & (reliability: 318.0) & (original description: Putative YPEL2, Description = Protein yippee-like, PFAM = PF03226)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1150_445879-455551' '(at1g16180 : 529.0) Serinc-domain containing serine and sphingolipid biosynthesis protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TMS membrane protein/tumour differentially expressed protein (InterPro:IPR005016); BEST Arabidopsis thaliana protein match is: Serinc-domain containing serine and sphingolipid biosynthesis protein (TAIR:AT3G06170.1). & (gnl|cdd|37803 : 425.0) no description available & (gnl|cdd|66988 : 425.0) no description available & (reliability: 1058.0) & (original description: Putative pco062914, Description = Putative serine incorporator, PFAM = PF03348)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1175_73481-81690' '(gnl|cdd|36491 : 467.0) no description available & (at1g10950 : 448.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis.; transmembrane nine 1 (TMN1); LOCATED IN: integral to membrane, Golgi apparatus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G37310.1); Has 1611 Blast hits to 1538 proteins in 326 species: Archae - 0; Bacteria - 16; Metazoa - 610; Fungi - 273; Plants - 454; Viruses - 0; Other Eukaryotes - 258 (source: NCBI BLink). & (gnl|cdd|66650 : 302.0) no description available & (reliability: 896.0) & (original description: Putative tm9sf3, Description = Transmembrane 9 superfamily member, PFAM = PF02990;PF02990)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1179_386181-422236' '(at3g02690 : 419.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); Has 18949 Blast hits to 18894 proteins in 2006 species: Archae - 336; Bacteria - 13590; Metazoa - 17; Fungi - 4; Plants - 207; Viruses - 0; Other Eukaryotes - 4795 (source: NCBI BLink). & (gnl|cdd|31041 : 92.2) no description available & (reliability: 838.0) & (original description: Putative pecM, Description = DMT(Drug/metabolite transporter) superfamily permease, PFAM = PF00892;PF00892)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1222_169253-174030' '(at2g23520 : 1107.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT4G37100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37353 : 663.0) no description available & (reliability: 2214.0) & (original description: Putative At2g23520, Description = Catalytic/ pyridoxal phosphate binding protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1224_386844-389980' '(at5g48050 : 109.0) CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative , Description = , PFAM = PF14223)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1254_60799-87557' '(at2g25870 : 600.0) haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: metallopeptidase activity, hydrolase activity, catalytic activity, zinc ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0054, conserved site (InterPro:IPR020549), Cof protein (InterPro:IPR000150), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), HAD superfamily hydrolase-like, type 3 (InterPro:IPR013200), Uncharacterised protein family UPF0054 (InterPro:IPR002036); Has 22843 Blast hits to 22827 proteins in 2747 species: Archae - 229; Bacteria - 20428; Metazoa - 41; Fungi - 14; Plants - 67; Viruses - 0; Other Eukaryotes - 2064 (source: NCBI BLink). & (gnl|cdd|87484 : 181.0) no description available & (reliability: 1200.0) & (original description: Putative ybeY, Description = Haloacid dehalogenase-like hydrolase family protein, PFAM = PF02130;PF08282)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1274_188788-193150' '(at1g45170 : 242.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42960.1); Has 60 Blast hits to 60 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 484.0) & (original description: Putative OEP24A, Description = Outer envelope pore protein 24A, chloroplastic, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1302_127898-133546' '(at2g35450 : 460.0) catalytics;hydrolases; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amidohydrolase 2 (InterPro:IPR006992); Has 1373 Blast hits to 1373 proteins in 381 species: Archae - 4; Bacteria - 1000; Metazoa - 6; Fungi - 6; Plants - 45; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (gnl|cdd|86744 : 103.0) no description available & (reliability: 920.0) & (original description: Putative At2g35450, Description = Catalytic/ hydrolase, PFAM = PF04909)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1303_260931-271961' '(at3g53850 : 149.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT5G02060.1); Has 207 Blast hits to 207 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative At3g53850, Description = CASP-like protein 5B2, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1304_330181-332960' '(at1g28280 : 147.0) VQ motif-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT2G33780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative VQ4, Description = VQ motif-containing protein 4, PFAM = PF05678)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1320_467317-476046' '(at5g40270 : 600.0) HD domain-containing metal-dependent phosphohydrolase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607); BEST Arabidopsis thaliana protein match is: HD domain-containing metal-dependent phosphohydrolase family protein (TAIR:AT5G40290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37892 : 482.0) no description available & (gnl|cdd|31276 : 180.0) no description available & (reliability: 1200.0) & (original description: Putative SAMHD1, Description = Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, PFAM = PF01966)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1322_404944-417772' '(at1g18440 : 287.0) Peptidyl-tRNA hydrolase family protein; FUNCTIONS IN: aminoacyl-tRNA hydrolase activity; INVOLVED IN: translation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-tRNA hydrolase, conserved site (InterPro:IPR018171), Peptidyl-tRNA hydrolase (InterPro:IPR001328); BEST Arabidopsis thaliana protein match is: Peptidyl-tRNA hydrolase family protein (TAIR:AT5G16140.2); Has 8043 Blast hits to 8040 proteins in 2597 species: Archae - 0; Bacteria - 5299; Metazoa - 47; Fungi - 102; Plants - 126; Viruses - 0; Other Eukaryotes - 2469 (source: NCBI BLink). & (gnl|cdd|48347 : 287.0) no description available & (gnl|cdd|37466 : 202.0) no description available & (reliability: 574.0) & (original description: Putative pth, Description = Peptidyl-tRNA hydrolase, PFAM = PF01195)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1323_74218-79118' '(at1g08800 : 206.0) Protein of unknown function, DUF593; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT2G30690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68159 : 115.0) no description available & (reliability: 412.0) & (original description: Putative BnaA08g26760D, Description = BnaA08g26760D protein, PFAM = PF04576)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1337_81151-89457' '(at5g42570 : 248.0) B-cell receptor-associated 31-like; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: B-cell receptor-associated protein 31-like (TAIR:AT1G11905.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37173 : 145.0) no description available & (reliability: 496.0) & (original description: Putative LOC100273803, Description = B-cell receptor-associated protein 31-like containing protein, PFAM = PF05529)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1338_112556-122373' '(gnl|cdd|37659 : 874.0) no description available & (at3g23940 : 839.0) dehydratase family; CONTAINS InterPro DOMAIN/s: Dihydroxy-acid dehydratase (InterPro:IPR004404), Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site (InterPro:IPR020558), Dihydroxy-acid/6-phosphogluconate dehydratase (InterPro:IPR000581). & (gnl|cdd|80774 : 736.0) no description available & (reliability: 1678.0) & (original description: Putative DHAD, Description = Dihydroxy-acid dehydratase, chloroplastic, PFAM = PF00920)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1339_36798-60438' '(at3g11620 : 312.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2305 (InterPro:IPR019363); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39178 : 102.0) no description available & (reliability: 624.0) & (original description: Putative TCM_022849, Description = Alpha/beta-Hydrolases superfamily protein isoform 3, PFAM = PF10230)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1339_36834-55075' '(at3g11620 : 363.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2305 (InterPro:IPR019363); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39178 : 112.0) no description available & (reliability: 726.0) & (original description: Putative At3g11620, Description = Putative uncharacterized protein At3g11620, PFAM = PF10230)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1350_27425-40166' '(at1g16570 : 658.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38152 : 494.0) no description available & (reliability: 1316.0) & (original description: Putative TUN, Description = UDP-glycosyltransferase TURAN, PFAM = PF13579;PF13692)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1384_370171-402716' '(at2g07360 : 1581.0) SH3 domain-containing protein; FUNCTIONS IN: binding; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Src homology-3 domain (InterPro:IPR001452), Armadillo-type fold (InterPro:IPR016024). & (reliability: 3162.0) & (original description: Putative SRC, Description = Src homology 3 domain containing protein, PFAM = PF14604)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1385_202838-206047' '(at1g51580 : 194.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 6723 Blast hits to 3876 proteins in 329 species: Archae - 3; Bacteria - 266; Metazoa - 4280; Fungi - 575; Plants - 1237; Viruses - 20; Other Eukaryotes - 342 (source: NCBI BLink). & (gnl|cdd|37401 : 121.0) no description available & (reliability: 388.0) & (original description: Putative At1g51580, Description = KH domain-containing protein, PFAM = PF00013)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1396_88031-111197' '(at2g32840 : 93.2) proline-rich family protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G04930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative TCM_005945, Description = Hydroxyproline-rich glycoprotein family protein, putative isoform 1, PFAM = PF15306)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1438_69831-73606' '(at3g14172 : 175.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G72410.1). & (reliability: 350.0) & (original description: Putative CIP7, Description = COP1-interacting-like protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1472_62634-69967' '(at4g39970 : 442.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT3G48420.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30982 : 134.0) no description available & (gnl|cdd|38125 : 101.0) no description available & (reliability: 884.0) & (original description: Putative At4g39970, Description = Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970, PFAM = PF13419)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1542_268270-272464' '(at1g26160 : 173.0) Metal-dependent phosphohydrolase; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607); BEST Arabidopsis thaliana protein match is: Metal-dependent phosphohydrolase (TAIR:AT2G23820.2); Has 1552 Blast hits to 1531 proteins in 690 species: Archae - 126; Bacteria - 959; Metazoa - 120; Fungi - 153; Plants - 73; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink). & (gnl|cdd|38407 : 127.0) no description available & (reliability: 346.0) & (original description: Putative pco089793, Description = Metal-dependent phosphohydrolase, PFAM = PF13023)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1548_330685-335580' '(at2g37730 : 513.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT3G11420.1); Has 511 Blast hits to 500 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 144; Plants - 279; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|68226 : 292.0) no description available & (gnl|cdd|37457 : 223.0) no description available & (reliability: 1026.0) & (original description: Putative GT31C5, Description = Glycosyltransferase-like protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1565_302035-320837' '(at5g12040 : 122.0) Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein; FUNCTIONS IN: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, zinc ion binding; INVOLVED IN: nitrogen compound metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010); BEST Arabidopsis thaliana protein match is: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein (TAIR:AT4G08790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36024 : 86.5) no description available & (reliability: 244.0) & (original description: Putative nit2, Description = Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein, PFAM = PF00795)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1570_191776-197546' '(at1g18720 : 167.0) Protein of unknown function (DUF962); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF962 (InterPro:IPR009305); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF962) (TAIR:AT1G74440.1); Has 638 Blast hits to 636 proteins in 299 species: Archae - 0; Bacteria - 335; Metazoa - 3; Fungi - 143; Plants - 88; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|38502 : 140.0) no description available & (gnl|cdd|69636 : 106.0) no description available & (reliability: 334.0) & (original description: Putative Sb49, Description = YGL010w-like protein, PFAM = PF06127)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1602_241409-251036' '(at1g26160 : 296.0) Metal-dependent phosphohydrolase; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607); BEST Arabidopsis thaliana protein match is: Metal-dependent phosphohydrolase (TAIR:AT2G23820.2); Has 1552 Blast hits to 1531 proteins in 690 species: Archae - 126; Bacteria - 959; Metazoa - 120; Fungi - 153; Plants - 73; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink). & (gnl|cdd|38407 : 233.0) no description available & (gnl|cdd|32080 : 109.0) no description available & (reliability: 592.0) & (original description: Putative hddc2, Description = Metal-dependent phosphohydrolase, PFAM = PF13023)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1653_226103-231766' '(at1g51450 : 276.0) Nuclear protein required for early embryogenesis.; TRAUCO (TRO); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: histone methylation, embryo development; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SPla/RYanodine receptor subgroup (InterPro:IPR018355), B302 (SPRY)-like (InterPro:IPR001870), SPla/RYanodine receptor SPRY (InterPro:IPR003877); Has 2366 Blast hits to 2103 proteins in 282 species: Archae - 12; Bacteria - 162; Metazoa - 1213; Fungi - 403; Plants - 173; Viruses - 13; Other Eukaryotes - 390 (source: NCBI BLink). & (gnl|cdd|37837 : 191.0) no description available & (reliability: 552.0) & (original description: Putative ASH2, Description = Set1/Ash2 histone methyltransferase complex subunit ASH2, PFAM = PF00622)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1654_42529-68359' '(at4g10050 : 363.0) esterase/lipase/thioesterase family protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073), Protein phosphatase methylesterase, eukaryotic (InterPro:IPR016812); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37775 : 247.0) no description available & (reliability: 726.0) & (original description: Putative Zm.4431, Description = Protein phosphatase methylesterase 1, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1654_43752-58547' '(at4g10050 : 208.0) esterase/lipase/thioesterase family protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073), Protein phosphatase methylesterase, eukaryotic (InterPro:IPR016812); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37775 : 157.0) no description available & (reliability: 416.0) & (original description: Putative At4g10050, Description = Protein phosphatase methylesterase 1, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1674_229571-240206' '(at5g08390 : 773.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G23430.1); Has 114222 Blast hits to 41452 proteins in 998 species: Archae - 86; Bacteria - 11863; Metazoa - 46637; Fungi - 24709; Plants - 15354; Viruses - 6; Other Eukaryotes - 15567 (source: NCBI BLink). & (gnl|cdd|35488 : 559.0) no description available & (gnl|cdd|29257 : 204.0) no description available & (p93107|pf20_chlre : 100.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1546.0) & (original description: Putative kat80, Description = Katanin p80 WD40 repeat-containing subunit B1 homolog, PFAM = PF13925;PF00400;PF00400;PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1685_227049-235780' '(at5g63620 : 536.0) GroES-like zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: cobalt ion binding, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT1G64710.1); Has 51156 Blast hits to 51010 proteins in 3327 species: Archae - 886; Bacteria - 33078; Metazoa - 1881; Fungi - 3909; Plants - 3940; Viruses - 3; Other Eukaryotes - 7459 (source: NCBI BLink). & (gnl|cdd|35245 : 322.0) no description available & (gnl|cdd|31262 : 249.0) no description available & (p12886|adh1_pea : 111.0) Alcohol dehydrogenase 1 (EC 1.1.1.1) - Pisum sativum (Garden pea) & (reliability: 1072.0) & (original description: Putative ssr, Description = Succinate-semialdehyde reductase, PFAM = PF08240;PF00107)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1706_411873-414323' '(at5g42570 : 139.0) B-cell receptor-associated 31-like; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: B-cell receptor-associated protein 31-like (TAIR:AT1G11905.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37173 : 83.5) no description available & (reliability: 278.0) & (original description: Putative At1g11905, Description = B-cell receptor-associated 31-like protein, PFAM = PF05529)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1785_43985-53930' '(at5g61250 : 693.0) Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-β-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be secreted.; glucuronidase 1 (GUS1); FUNCTIONS IN: beta-glucuronidase activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 79, N-terminal (InterPro:IPR005199); BEST Arabidopsis thaliana protein match is: glucuronidase 2 (TAIR:AT5G07830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67288 : 401.0) no description available & (reliability: 1386.0) & (original description: Putative At5g61250, Description = Heparanase-like protein 2, PFAM = PF03662)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1802_269981-272879' '(gnl|cdd|28751 : 176.0) no description available & (at2g22170 : 168.0) Lipase/lipooxygenase, PLAT/LH2 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976); BEST Arabidopsis thaliana protein match is: Lipase/lipooxygenase, PLAT/LH2 family protein (TAIR:AT4G39730.1); Has 190 Blast hits to 181 proteins in 41 species: Archae - 0; Bacteria - 2; Metazoa - 36; Fungi - 0; Plants - 151; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative JR14, Description = Putative root storage protein, PFAM = PF06232)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1805_262529-271870' '(at3g16230 : 295.0) Predicted eukaryotic LigT; FUNCTIONS IN: RNA binding, catalytic activity; INVOLVED IN: RNA metabolic process, regulation of transcription; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088), Predicted eukaryotic LigT (InterPro:IPR009210), RNA ligase/cyclic nucleotide phosphodiesterase (InterPro:IPR009097), Protein kinase A anchor protein, nuclear localisation signal domain (InterPro:IPR019510); BEST Arabidopsis thaliana protein match is: Predicted eukaryotic LigT (TAIR:AT3G16220.1). & (gnl|cdd|38025 : 190.0) no description available & (reliability: 590.0) & (original description: Putative AGO2, Description = AKAP7 2'5' RNA ligase-like domain protein, PFAM = PF10469)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1817_305990-308886' '(gnl|cdd|66174 : 148.0) no description available & (at3g26040 : 129.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 2415 Blast hits to 2403 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 2353; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative AAT1, Description = Acetyltranferase-like protein, PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1841_7770-12213' '(at1g73480 : 112.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G18360.1); Has 6390 Blast hits to 6380 proteins in 1730 species: Archae - 36; Bacteria - 4672; Metazoa - 140; Fungi - 153; Plants - 452; Viruses - 63; Other Eukaryotes - 874 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative CSE16, Description = Hydrolase family protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1874_272828-384808' '(at1g29380 : 132.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT2G30933.1); Has 79591 Blast hits to 28935 proteins in 1734 species: Archae - 133; Bacteria - 28582; Metazoa - 23109; Fungi - 4542; Plants - 9902; Viruses - 1060; Other Eukaryotes - 12263 (source: NCBI BLink). & (gnl|cdd|87420 : 128.0) no description available & (p52409|e13b_wheat : 93.2) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 264.0) & (original description: Putative At1g09460, Description = Carbohydrate-binding X8 domain protein, PFAM = PF07983)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1874_381693-384396' '(at1g29380 : 132.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT2G30933.1); Has 79591 Blast hits to 28935 proteins in 1734 species: Archae - 133; Bacteria - 28582; Metazoa - 23109; Fungi - 4542; Plants - 9902; Viruses - 1060; Other Eukaryotes - 12263 (source: NCBI BLink). & (gnl|cdd|87420 : 127.0) no description available & (p52409|e13b_wheat : 90.9) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 264.0) & (original description: Putative At1g09460, Description = Carbohydrate-binding X8 domain protein, PFAM = PF07983)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1881_106371-111503' '(at1g45170 : 239.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42960.1); Has 60 Blast hits to 60 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 478.0) & (original description: Putative OEP24, Description = Outer envelope pore protein 24, chloroplastic, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold1906_259253-294900' '(at5g05460 : 719.0) Glycosyl hydrolase family 85 ; FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 85 (InterPro:IPR005201), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 85 (TAIR:AT3G11040.1); Has 480 Blast hits to 472 proteins in 209 species: Archae - 0; Bacteria - 262; Metazoa - 108; Fungi - 28; Plants - 47; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|37542 : 510.0) no description available & (gnl|cdd|67272 : 332.0) no description available & (reliability: 1438.0) & (original description: Putative ENGASE2, Description = Cytosolic endo-beta-N-acetylglucosaminidase 2, PFAM = PF03644)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2003_348465-352898' '(at1g79740 : 407.0) hAT transposon superfamily; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 899 Blast hits to 801 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 5; Plants - 875; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|68508 : 173.0) no description available & (reliability: 814.0) & (original description: Putative H9-4, Description = Transposase-like protein, PFAM = PF04937;PF05699;PF02892)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2029_220540-223869' '(at3g60270 : 81.6) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: uclacyanin 2 (TAIR:AT2G44790.1); Has 2285 Blast hits to 1861 proteins in 153 species: Archae - 3; Bacteria - 173; Metazoa - 13; Fungi - 54; Plants - 1712; Viruses - 73; Other Eukaryotes - 257 (source: NCBI BLink). & (gnl|cdd|66026 : 81.5) no description available & (reliability: 163.2) & (original description: Putative Ccrd_008683, Description = Cupredoxin, PFAM = PF02298)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2050_270020-353080' '(at4g14240 : 620.0) CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein with a domain of unknown function (DUF21) (TAIR:AT4G14230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37329 : 381.0) no description available & (gnl|cdd|31445 : 138.0) no description available & (reliability: 1170.0) & (original description: Putative CBSDUF1, Description = DUF21 domain-containing protein At4g14240, PFAM = PF01595)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2067_288458-294587' '(at1g80500 : 165.0) SNARE-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, ER to Golgi vesicle-mediated transport; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sedlin (InterPro:IPR006722), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT2G20930.1); Has 584 Blast hits to 580 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 289; Fungi - 112; Plants - 97; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|38697 : 124.0) no description available & (gnl|cdd|86702 : 116.0) no description available & (reliability: 330.0) & (original description: Putative LOC100280581, Description = Trafficking protein particle complex protein 2, PFAM = PF04628)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2075_123191-134095' '(at5g12040 : 485.0) Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein; FUNCTIONS IN: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, zinc ion binding; INVOLVED IN: nitrogen compound metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010); BEST Arabidopsis thaliana protein match is: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein (TAIR:AT4G08790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36024 : 308.0) no description available & (gnl|cdd|30737 : 197.0) no description available & (reliability: 970.0) & (original description: Putative Nit2, Description = Omega-amidase NIT2, PFAM = PF00795)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2094_295900-303391' '(p59234|yipl_soltu : 189.0) Protein yippee-like - Solanum tuberosum (Potato) & (at2g40110 : 182.0) Yippee family putative zinc-binding protein; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: Yippee family putative zinc-binding protein (TAIR:AT3G08990.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38609 : 165.0) no description available & (gnl|cdd|66871 : 126.0) no description available & (reliability: 364.0) & (original description: Putative ypel, Description = Protein yippee-like, PFAM = PF03226)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2106_331433-347785' '(at5g43560 : 438.0) TRAF-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like superfamily protein (TAIR:AT1G04300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|58100 : 116.0) no description available & (reliability: 876.0) & (original description: Putative At4g16045, Description = Putative MATH domain-containing protein-like, PFAM = PF00917)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2181_75853-88104' '(at5g07630 : 487.0) lipid transporters; FUNCTIONS IN: lipid transporter activity; INVOLVED IN: nuclear division, lipid transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RFT1 (InterPro:IPR007594); Has 367 Blast hits to 362 proteins in 190 species: Archae - 2; Bacteria - 15; Metazoa - 110; Fungi - 135; Plants - 51; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|38075 : 313.0) no description available & (gnl|cdd|68091 : 187.0) no description available & (reliability: 974.0) & (original description: Putative BnaA10g30240D, Description = BnaA10g30240D protein, PFAM = PF04506)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2215_307323-311871' '(at4g22360 : 306.0) SWIB complex BAF60b domain-containing protein; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121), SWIB domain (InterPro:IPR019835), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: SWIB complex BAF60b domain-containing protein (TAIR:AT3G19080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37157 : 124.0) no description available & (gnl|cdd|47490 : 112.0) no description available & (reliability: 612.0) & (original description: Putative BnaA08g10220D, Description = BnaA08g10220D protein, PFAM = PF08766;PF02201;PF02201)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2261_73357-83722' '(at4g15050 : 253.0) Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G10190.1); Has 633 Blast hits to 604 proteins in 22 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 6; Plants - 620; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66735 : 177.0) no description available & (reliability: 470.0) & (original description: Putative BnaC01g22560D, Description = BnaC01g22560D protein, PFAM = PF03080;PF14365)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2261_156142-166704' '(at4g15050 : 197.0) Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G10190.1); Has 633 Blast hits to 604 proteins in 22 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 6; Plants - 620; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66735 : 164.0) no description available & (reliability: 382.0) & (original description: Putative , Description = , PFAM = PF14365;PF03080)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2265_1-1584' '(at5g62180 : 172.0) carboxyesterase 20 (CXE20); INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G45600.1); Has 9350 Blast hits to 9331 proteins in 1590 species: Archae - 113; Bacteria - 5436; Metazoa - 449; Fungi - 960; Plants - 1345; Viruses - 3; Other Eukaryotes - 1044 (source: NCBI BLink). & (gnl|cdd|36728 : 156.0) no description available & (gnl|cdd|87389 : 118.0) no description available & (q6l545|gid1_orysa : 110.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 344.0) & (original description: Putative est, Description = Gibberellin receptor GID1, putative, PFAM = PF07859)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2319_65995-87807' '(at1g44910 : 548.0) Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries.; pre-mRNA-processing protein 40A (PRP40A); CONTAINS InterPro DOMAIN/s: FF domain (InterPro:IPR002713), WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: pre-mRNA-processing protein 40B (TAIR:AT3G19670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35374 : 250.0) no description available & (gnl|cdd|34707 : 108.0) no description available & (reliability: 1096.0) & (original description: Putative PRP40A, Description = Pre-mRNA-processing protein 40A, PFAM = PF01846;PF01846;PF01846;PF01846;PF00397;PF00397)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2363_21705-37690' '(at1g02330 : 259.0) CONTAINS InterPro DOMAIN/s: Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756); Has 1239 Blast hits to 998 proteins in 204 species: Archae - 4; Bacteria - 71; Metazoa - 421; Fungi - 109; Plants - 87; Viruses - 5; Other Eukaryotes - 542 (source: NCBI BLink). & (gnl|cdd|38555 : 169.0) no description available & (gnl|cdd|70514 : 88.2) no description available & (reliability: 518.0) & (original description: Putative T6A9.2, Description = T6A9.2 protein, PFAM = PF07052)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2375_441810-450631' '(at2g46200 : 266.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 532.0) & (original description: Putative SNRNP59, Description = U11/U12 small nuclear ribonucleoprotein 59 kDa protein, PFAM = PF16021)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2388_1-12811' '(at5g18525 : 1722.0) protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Beige/BEACH (InterPro:IPR000409), Serine/threonine-protein kinase domain (InterPro:IPR002290), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Tyrosine-protein kinase, active site (InterPro:IPR008266), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein / beige-related (TAIR:AT2G45540.1); Has 6236 Blast hits to 5560 proteins in 402 species: Archae - 7; Bacteria - 1002; Metazoa - 1933; Fungi - 1317; Plants - 774; Viruses - 0; Other Eukaryotes - 1203 (source: NCBI BLink). & (gnl|cdd|36997 : 238.0) no description available & (gnl|cdd|85884 : 141.0) no description available & (reliability: 3444.0) & (original description: Putative GFS12, Description = Protein GFS12, PFAM = PF02138;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2505_116508-119083' '(gnl|cdd|71242 : 93.5) no description available & (at1g14060 : 91.7) GCK domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: GCK (InterPro:IPR012891); BEST Arabidopsis thaliana protein match is: GCK domain-containing protein (TAIR:AT5G02210.1); Has 325 Blast hits to 285 proteins in 75 species: Archae - 0; Bacteria - 2; Metazoa - 95; Fungi - 33; Plants - 117; Viruses - 2; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative Ccrd_001748, Description = GCK-like protein, PFAM = PF07802)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2530_64507-71762' '(at2g34260 : 367.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37655 : 92.4) no description available & (gnl|cdd|29257 : 89.3) no description available & (reliability: 734.0) & (original description: Putative WDR55, Description = WD repeat-containing protein 55, PFAM = PF00400)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2614_1-6541' '(at1g80810 : 80.1) Tudor/PWWP/MBT superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1); Has 103396 Blast hits to 54411 proteins in 2510 species: Archae - 599; Bacteria - 9234; Metazoa - 41155; Fungi - 13255; Plants - 5790; Viruses - 1058; Other Eukaryotes - 32305 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative At5g10950, Description = Putative uncharacterized protein At5g10950, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2628_110980-117542' '(at5g57700 : 476.0) BNR/Asp-box repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Neuraminidase (InterPro:IPR011040), BNR repeat (InterPro:IPR002860); Has 762 Blast hits to 754 proteins in 300 species: Archae - 6; Bacteria - 615; Metazoa - 0; Fungi - 22; Plants - 42; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|34308 : 118.0) no description available & (reliability: 952.0) & (original description: Putative nanH, Description = Exported exo-alpha-sialidase, PFAM = PF13088)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2634_257564-265322' '(at5g16020 : 485.0) Encodes GEX3, a plasma membrane localized protein expressed in the male gametophyte. Required for micropylar pollen tube guidance. Also plays a role during early embryogenesis.; gamete-expressed 3 (GEX3); CONTAINS InterPro DOMAIN/s: Quinonprotein alcohol dehydrogenase-like (InterPro:IPR011047); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 970.0) & (original description: Putative GEX3, Description = Protein GAMETE EXPRESSED 3, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2669_206036-238495' '(at4g24930 : 148.0) thylakoid lumenal 17.9 kDa protein, chloroplast; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 48 Blast hits to 48 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative IDP1426, Description = Thylakoid lumenal 17.9 kDa protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2682_23980-32821' '(at2g35710 : 636.0) Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process, biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G16600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37161 : 90.6) no description available & (reliability: 1272.0) & (original description: Putative OsGGT, Description = Glycogenin-2, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2793_113581-121465' '(at4g35140 : 394.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G38480.1); Has 10094 Blast hits to 7474 proteins in 477 species: Archae - 10; Bacteria - 1944; Metazoa - 3788; Fungi - 2083; Plants - 884; Viruses - 0; Other Eukaryotes - 1385 (source: NCBI BLink). & (gnl|cdd|36548 : 332.0) no description available & (gnl|cdd|29257 : 87.4) no description available & (reliability: 788.0) & (original description: Putative pc326, Description = DDB1-and CUL4-associated factor 8, PFAM = PF00400)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2793_113617-121459' '(at4g35140 : 424.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G38480.1); Has 10094 Blast hits to 7474 proteins in 477 species: Archae - 10; Bacteria - 1944; Metazoa - 3788; Fungi - 2083; Plants - 884; Viruses - 0; Other Eukaryotes - 1385 (source: NCBI BLink). & (gnl|cdd|36548 : 358.0) no description available & (gnl|cdd|29257 : 80.4) no description available & (reliability: 848.0) & (original description: Putative pc326, Description = Nucleotide binding protein, PFAM = PF00400)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2804_13666-22924' '(at5g07980 : 192.0) dentin sialophosphoprotein-related; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07940.2); Has 1336 Blast hits to 783 proteins in 174 species: Archae - 4; Bacteria - 291; Metazoa - 248; Fungi - 128; Plants - 141; Viruses - 0; Other Eukaryotes - 524 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2968_234416-248247' '(at3g21290 : 246.0) dentin sialophosphoprotein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Occludin/RNA polymerase II elongation factor, ELL domain (InterPro:IPR010844); Has 17175 Blast hits to 8691 proteins in 788 species: Archae - 88; Bacteria - 6651; Metazoa - 4182; Fungi - 1520; Plants - 456; Viruses - 109; Other Eukaryotes - 4169 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative LOC100383828, Description = DNA-binding protein ESCAROLA, PFAM = PF07303)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold2979_265818-277707' '(at1g35470 : 564.0) SPla/RYanodine receptor (SPRY) domain-containing protein; CONTAINS InterPro DOMAIN/s: B302 (SPRY)-like (InterPro:IPR001870), CTLH, C-terminal LisH motif (InterPro:IPR006595), SPla/RYanodine receptor SPRY (InterPro:IPR003877), Ran binding protein, CRA domain (InterPro:IPR019589), SPla/RYanodine receptor subgroup (InterPro:IPR018355), LisH dimerisation motif (InterPro:IPR006594), Ran binding protein-like, CRA domain (InterPro:IPR013144); BEST Arabidopsis thaliana protein match is: SPla/RYanodine receptor (SPRY) domain-containing protein (TAIR:AT4G09340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36690 : 298.0) no description available & (gnl|cdd|84907 : 97.0) no description available & (reliability: 1128.0) & (original description: Putative At1g35470, Description = RanBPM-like protein, PFAM = PF10607;PF00622)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3002_242096-253813' '(at5g58000 : 275.0) Reticulon family protein; LOCATED IN: endoplasmic reticulum, chloroplast; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT2G20590.1); Has 1128 Blast hits to 1113 proteins in 146 species: Archae - 0; Bacteria - 2; Metazoa - 759; Fungi - 49; Plants - 88; Viruses - 4; Other Eukaryotes - 226 (source: NCBI BLink). & (reliability: 550.0) & (original description: Putative RTNLB21, Description = Reticulon-like protein B21, PFAM = PF02453)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3012_222491-226988' '(at2g01190 : 164.0) Octicosapeptide/Phox/Bem1p family protein; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT3G18230.1); Has 5347 Blast hits to 4615 proteins in 344 species: Archae - 4; Bacteria - 100; Metazoa - 2308; Fungi - 1293; Plants - 931; Viruses - 29; Other Eukaryotes - 682 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative PGSC0003DMG400005971, Description = Octicosapeptide/phox/Bem1p domain kinase superfamily protein, PFAM = PF00564)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3026_126453-138980' '(at5g19820 : 919.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37382 : 596.0) no description available & (reliability: 1838.0) & (original description: Putative emb2734, Description = Importin-5, PFAM = PF13646;PF00514;PF02985)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3044_26920-33098' '(at3g11470 : 326.0) 4'-phosphopantetheinyl transferase superfamily; FUNCTIONS IN: holo-[acyl-carrier-protein] synthase activity, magnesium ion binding, transferase activity; INVOLVED IN: metabolic process, macromolecule biosynthetic process; CONTAINS InterPro DOMAIN/s: 4'-phosphopantetheinyl transferase (InterPro:IPR008278); BEST Arabidopsis thaliana protein match is: 4'-phosphopantetheinyl transferase superfamily (TAIR:AT2G02770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36163 : 190.0) no description available & (gnl|cdd|32274 : 83.9) no description available & (reliability: 652.0) & (original description: Putative HAS, Description = Holo-ACP synthase, PFAM = PF01648)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3075_70983-86119' '(at4g30260 : 276.0) Integral membrane Yip1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Yip1 domain (InterPro:IPR006977); BEST Arabidopsis thaliana protein match is: Integral membrane Yip1 family protein (TAIR:AT2G18840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38157 : 237.0) no description available & (gnl|cdd|86741 : 103.0) no description available & (reliability: 552.0) & (original description: Putative At2g18840, Description = Protein YIPF, PFAM = PF04893)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3076_64434-70630' '(at5g51570 : 485.0) SPFH/Band 7/PHB domain-containing membrane-associated protein family; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT5G62740.1); Has 5870 Blast hits to 5870 proteins in 1885 species: Archae - 189; Bacteria - 4209; Metazoa - 145; Fungi - 209; Plants - 268; Viruses - 20; Other Eukaryotes - 830 (source: NCBI BLink). & (gnl|cdd|37831 : 353.0) no description available & (gnl|cdd|48219 : 348.0) no description available & (reliability: 970.0) & (original description: Putative hir4, Description = Hypersensitive induced response protein 4, PFAM = PF01145)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3091_191390-194906' '(at5g64430 : 252.0) Octicosapeptide/Phox/Bem1p family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT5G09620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84866 : 82.7) no description available & (reliability: 504.0) & (original description: Putative At5g64430, Description = At5g64430, PFAM = PF00564)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3091_257012-268505' '(at5g64440 : 753.0) AtFAAH (fatty acid amide hydrolase) modulates endogenous NAEs (N-Acylethanolamines) levels in plants by hydrolyzing NAEs to ethanolamine and their corresponding free fatty acids. NAE depletion likely participates in the regulation of plant growth.; fatty acid amide hydrolase (FAAH); FUNCTIONS IN: N-(long-chain-acyl)ethanolamine deacylase activity, amidase activity; INVOLVED IN: defense response to bacterium; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT3G25660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36425 : 336.0) no description available & (gnl|cdd|30503 : 319.0) no description available & (reliability: 1506.0) & (original description: Putative FAAH, Description = Fatty acid amide hydrolase, PFAM = PF01425)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3091_258201-266728' '(at5g64440 : 588.0) AtFAAH (fatty acid amide hydrolase) modulates endogenous NAEs (N-Acylethanolamines) levels in plants by hydrolyzing NAEs to ethanolamine and their corresponding free fatty acids. NAE depletion likely participates in the regulation of plant growth.; fatty acid amide hydrolase (FAAH); FUNCTIONS IN: N-(long-chain-acyl)ethanolamine deacylase activity, amidase activity; INVOLVED IN: defense response to bacterium; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT3G25660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36425 : 300.0) no description available & (gnl|cdd|30503 : 274.0) no description available & (reliability: 1176.0) & (original description: Putative gatA, Description = Fatty acid amide hydrolase, PFAM = PF01425)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3103_249376-257042' '(at3g50845 : 164.0) Protein of unknown function (DUF59); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF59 (InterPro:IPR002744); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF59) (TAIR:AT1G68310.2); Has 567 Blast hits to 565 proteins in 213 species: Archae - 0; Bacteria - 0; Metazoa - 246; Fungi - 132; Plants - 85; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|38591 : 137.0) no description available & (gnl|cdd|34734 : 110.0) no description available & (reliability: 328.0) & (original description: Putative AE7, Description = Metastasis-associated protein MTA3, PFAM = PF01883)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3105_101588-106541' '(at2g46740 : 143.0) D-arabinono-1,4-lactone oxidase family protein; FUNCTIONS IN: oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity, FAD binding, catalytic activity; INVOLVED IN: oxidation reduction; LOCATED IN: cell wall; EXPRESSED IN: leaf apex, root; CONTAINS InterPro DOMAIN/s: D-arabinono-1,4-lactone oxidase (InterPro:IPR007173), FAD-binding, type 2 (InterPro:IPR016166), Plant-specific FAD-dependent oxidoreductase (InterPro:IPR010030), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: D-arabinono-1,4-lactone oxidase family protein (TAIR:AT2G46750.1); Has 2786 Blast hits to 2671 proteins in 804 species: Archae - 14; Bacteria - 1897; Metazoa - 120; Fungi - 214; Plants - 254; Viruses - 0; Other Eukaryotes - 287 (source: NCBI BLink). & (gnl|cdd|39928 : 122.0) no description available & (reliability: 286.0) & (original description: Putative GULLO1, Description = L-gulonolactone oxidase, PFAM = PF01565)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3111_205228-219687' '(at4g26190 : 190.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; CONTAINS InterPro DOMAIN/s: NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G36540.1); Has 27570 Blast hits to 17450 proteins in 1040 species: Archae - 84; Bacteria - 2677; Metazoa - 10403; Fungi - 2363; Plants - 1406; Viruses - 96; Other Eukaryotes - 10541 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative L484_018752, Description = Uncharacterized FCP1-like domain-containing protein, PFAM = PF03031)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3194_121884-140707' '(at2g04940 : 335.0) scramblase-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Scramblase (InterPro:IPR005552); Has 427 Blast hits to 416 proteins in 142 species: Archae - 0; Bacteria - 29; Metazoa - 228; Fungi - 113; Plants - 38; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|67419 : 150.0) no description available & (gnl|cdd|35840 : 138.0) no description available & (reliability: 670.0) & (original description: Putative At2g04940, Description = Altered inheritance rate of mitochondria protein 25 isoform 1, PFAM = PF03803;PF03803)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3302_200873-211186' '(at4g34280 : 691.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: U2A'/phosphoprotein 32 family A, C-terminal (InterPro:IPR003603), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G61210.2); Has 5718 Blast hits to 4596 proteins in 341 species: Archae - 5; Bacteria - 811; Metazoa - 2365; Fungi - 1046; Plants - 644; Viruses - 0; Other Eukaryotes - 847 (source: NCBI BLink). & (reliability: 1382.0) & (original description: Putative At4g34280, Description = At4g34280, PFAM = PF00400)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3335_24006-29434' '(at1g27760 : 177.0) Encodes a protein with similarity to human interferon-related developmental regulator (IFRD)that is involved in salt tolerance. Loss of function mutations are hypersensitive to salt stress and have reduced fertility. SAT32 is found in the cytoplasm but appears to translocate to the nucleus when plants are subject to salt stress.; SALT-TOLERANCE 32 (SAT32); FUNCTIONS IN: binding; INVOLVED IN: response to salt stress; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Interferon-related developmental regulator, N-terminal (InterPro:IPR007701), Interferon-related developmental regulator, C-terminal (InterPro:IPR006921), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68573 : 92.7) no description available & (reliability: 354.0) & (original description: Putative , Description = , PFAM = PF05004)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3348_24134-27878' '(at1g24130 : 358.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, heterotrimeric G-protein complex; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G50120.1); Has 45824 Blast hits to 22056 proteins in 757 species: Archae - 54; Bacteria - 6419; Metazoa - 16905; Fungi - 10404; Plants - 5900; Viruses - 0; Other Eukaryotes - 6142 (source: NCBI BLink). & (gnl|cdd|29257 : 140.0) no description available & (gnl|cdd|35540 : 100.0) no description available & (reliability: 716.0) & (original description: Putative Os02g0740900, Description = Os02g0740900 protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3443_49155-55013' '(at1g50660 : 507.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20350.1); Has 21445 Blast hits to 15134 proteins in 1325 species: Archae - 461; Bacteria - 2309; Metazoa - 11052; Fungi - 1737; Plants - 1035; Viruses - 42; Other Eukaryotes - 4809 (source: NCBI BLink). & (reliability: 1014.0) & (original description: Putative BnaC06g03880D, Description = BnaC06g03880D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3471_228170-235929' '(at3g16260 : 1002.0) Encodes a tRNase Z.; tRNAse Z4 (TRZ4); FUNCTIONS IN: 3'-tRNA processing endoribonuclease activity, catalytic activity; INVOLVED IN: tRNA 3'-end processing, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease Z (InterPro:IPR013471); BEST Arabidopsis thaliana protein match is: tRNAse Z3 (TAIR:AT1G52160.1); Has 6299 Blast hits to 4396 proteins in 1654 species: Archae - 442; Bacteria - 4351; Metazoa - 254; Fungi - 243; Plants - 108; Viruses - 0; Other Eukaryotes - 901 (source: NCBI BLink). & (gnl|cdd|37332 : 696.0) no description available & (gnl|cdd|31427 : 178.0) no description available & (reliability: 2004.0) & (original description: Putative TRZ4, Description = tRNAse Z4, PFAM = PF13691)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3490_217640-224507' '(at5g40570 : 150.0) Surfeit locus protein 2 (SURF2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Surfeit locus 2 (InterPro:IPR008833); BEST Arabidopsis thaliana protein match is: Surfeit locus protein 2 (SURF2) (TAIR:AT5G14440.1); Has 83 Blast hits to 79 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 37; Fungi - 2; Plants - 33; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|69025 : 99.8) no description available & (reliability: 300.0) & (original description: Putative TCM_016999, Description = Surfeit locus protein 2, putative isoform 1, PFAM = PF05477)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3507_289257-300053' '(at1g17330 : 284.0) Metal-dependent phosphohydrolase; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607); Has 1677 Blast hits to 1677 proteins in 841 species: Archae - 70; Bacteria - 1404; Metazoa - 0; Fungi - 90; Plants - 42; Viruses - 5; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|31608 : 95.1) no description available & (reliability: 568.0) & (original description: Putative yedJ, Description = HD domain protein, PFAM = PF01966)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3615_68211-74579' '(at5g42960 : 207.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G45170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative OEP24, Description = Chloroplastic outer envelope pore protein of 24 kDa, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3626_25666-35320' '(at1g16860 : 632.0) Ubiquitin-specific protease family C19-related protein; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: Ubiquitin-specific protease family C19-related protein (TAIR:AT1G78880.1); Has 605 Blast hits to 295 proteins in 85 species: Archae - 0; Bacteria - 22; Metazoa - 26; Fungi - 28; Plants - 169; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 1264.0) & (original description: Putative At1g16860, Description = Uncharacterized membrane protein At1g16860, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3683_27216-34471' '(at1g63300 : 577.0) Myosin heavy chain-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: Myosin heavy chain-related protein (TAIR:AT5G41140.1); Has 241668 Blast hits to 113961 proteins in 3668 species: Archae - 3215; Bacteria - 50568; Metazoa - 96634; Fungi - 19056; Plants - 12907; Viruses - 1139; Other Eukaryotes - 58149 (source: NCBI BLink). & (gnl|cdd|35383 : 106.0) no description available & (reliability: 1154.0) & (original description: Putative At5g41140, Description = Myosin heavy chain-related protein, PFAM = PF10358)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3734_191122-194286' '(at4g01410 : 163.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: NDR1/HIN1-like 1 (TAIR:AT3G11660.1); Has 938 Blast hits to 938 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 938; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 118.0) no description available & (reliability: 326.0) & (original description: Putative At4g01410, Description = At4g01410, PFAM = PF03168)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3759_172926-181271' '(at1g74300 : 256.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G74280.1); Has 1098 Blast hits to 1097 proteins in 261 species: Archae - 18; Bacteria - 573; Metazoa - 24; Fungi - 62; Plants - 313; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (reliability: 512.0) & (original description: Putative umc2763, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF00561)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3764_95563-107078' '(gnl|cdd|37779 : 401.0) no description available & (at2g01070 : 397.0) Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G72480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87161 : 262.0) no description available & (reliability: 794.0) & (original description: Putative At2g01070, Description = Lung seven transmembrane receptor-like protein, PFAM = PF06814)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3785_81230-87243' '(at5g38890 : 258.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Exosome complex, component CSL4 (InterPro:IPR019495); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38619 : 161.0) no description available & (gnl|cdd|31293 : 98.8) no description available & (reliability: 516.0) & (original description: Putative EXOSC1, Description = Exosome complex component CSL4, PFAM = PF10447;PF14382)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold3956_120608-141518' '(at5g05570 : 820.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: methyltransferase activity, nucleotide binding, nucleic acid binding; INVOLVED IN: vesicle-mediated transport, methylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), WD40 repeat, subgroup (InterPro:IPR019781), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G35560.2). & (gnl|cdd|37194 : 190.0) no description available & (reliability: 1640.0) & (original description: Putative At5g05570, Description = Transducin family protein / WD-40 repeat family protein, PFAM = PF00957)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold4018_21515-31639' '(at2g22650 : 490.0) FAD-dependent oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|31009 : 92.3) no description available & (reliability: 980.0) & (original description: Putative At2g22650, Description = FAD-dependent oxidoreductase-like protein, PFAM = PF01266)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold4084_121861-125063' '(at1g24530 : 316.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, heterotrimeric G-protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G24130.1); Has 47444 Blast hits to 22226 proteins in 799 species: Archae - 42; Bacteria - 6792; Metazoa - 17370; Fungi - 11016; Plants - 5872; Viruses - 0; Other Eukaryotes - 6352 (source: NCBI BLink). & (gnl|cdd|29257 : 107.0) no description available & (gnl|cdd|35495 : 83.6) no description available & (reliability: 632.0) & (original description: Putative At1g24530, Description = F21J9.19, PFAM = PF00400;PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold4264_23350-34776' '(at1g15740 : 516.0) Leucine-rich repeat family protein; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G23840.1); Has 38052 Blast hits to 19856 proteins in 856 species: Archae - 6; Bacteria - 8624; Metazoa - 11681; Fungi - 680; Plants - 12072; Viruses - 79; Other Eukaryotes - 4910 (source: NCBI BLink). & (gnl|cdd|39396 : 88.1) no description available & (reliability: 1032.0) & (original description: Putative PGSC0003DMG400030688, Description = F-box/LRR-repeat protein 14, PFAM = PF13516;PF13516;PF13516;PF13855;PF13855)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold4293_168592-173462' '(at5g50970 : 423.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G19920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35486 : 224.0) no description available & (gnl|cdd|29257 : 87.0) no description available & (reliability: 846.0) & (original description: Putative PHYPADRAFT_130046, Description = Predicted protein, PFAM = PF00400)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold4293_185167-192906' '(at2g33550 : 198.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT4G31270.1); Has 743 Blast hits to 735 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 8; Plants - 568; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative PGSC0003DMG400014176, Description = Os02g0516800 protein, PFAM = PF13837)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold4342_85970-95473' '(at5g61330 : 130.0) rRNA processing protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TRAUB (InterPro:IPR012617); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative At5g61330, Description = Protein AATF, PFAM = PF13339)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold4427_11492-210402' '(at4g16380 : 104.0) Heavy metal transport/detoxification superfamily protein ; BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G51090.1); Has 3773 Blast hits to 3325 proteins in 370 species: Archae - 4; Bacteria - 381; Metazoa - 1697; Fungi - 490; Plants - 712; Viruses - 65; Other Eukaryotes - 424 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative bac, Description = Neurofilament medium polypeptide, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold4446_63849-75695' '(at5g24710 : 1736.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 53337 Blast hits to 28879 proteins in 1972 species: Archae - 196; Bacteria - 12524; Metazoa - 15998; Fungi - 8175; Plants - 2336; Viruses - 1195; Other Eukaryotes - 12913 (source: NCBI BLink). & (reliability: 3472.0) & (original description: Putative At5g24710, Description = WD40 domain-containing protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold4530_152425-186050' '(at5g64440 : 420.0) AtFAAH (fatty acid amide hydrolase) modulates endogenous NAEs (N-Acylethanolamines) levels in plants by hydrolyzing NAEs to ethanolamine and their corresponding free fatty acids. NAE depletion likely participates in the regulation of plant growth.; fatty acid amide hydrolase (FAAH); FUNCTIONS IN: N-(long-chain-acyl)ethanolamine deacylase activity, amidase activity; INVOLVED IN: defense response to bacterium; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT3G25660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30503 : 309.0) no description available & (gnl|cdd|36425 : 266.0) no description available & (reliability: 840.0) & (original description: Putative FAAH, Description = Fatty acid amide hydrolase, PFAM = PF01425;PF01425)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold4579_159435-176520' '(at2g26490 : 553.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G34380.1); Has 38085 Blast hits to 18995 proteins in 635 species: Archae - 34; Bacteria - 5266; Metazoa - 14476; Fungi - 8827; Plants - 4594; Viruses - 0; Other Eukaryotes - 4888 (source: NCBI BLink). & (gnl|cdd|29257 : 141.0) no description available & (gnl|cdd|35495 : 87.0) no description available & (reliability: 1106.0) & (original description: Putative wdrp, Description = Transducin/WD40 repeat-like superfamily protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold4593_26137-33937' '(at2g37370 : 212.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13560.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 418.0) & (original description: Putative PGSC0003DMG400023933, Description = At5g13560, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold4723_2925-9486' '(at5g04990 : 327.0) Encodes a member of the Sad1/UNC-84 (SUN)-domain proteins: AtSUN1(At5g04990), AtSUN2(AT3G10730). SUN domain proteins are part of the cytoskeletal-nucleoskeletal bridging complexes. AtSUN1 and AtSUN2 are localized to the nuclear envelope and are present as homomers and heteromers in vivo.; SAD1/UNC-84 domain protein 1 (SUN1); FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: nuclear envelope, endoplasmic reticulum; EXPRESSED IN: inflorescence, cultured cell, callus, leaf; CONTAINS InterPro DOMAIN/s: Sad1/UNC-like, C-terminal (InterPro:IPR012919); BEST Arabidopsis thaliana protein match is: SAD1/UNC-84 domain protein 2 (TAIR:AT3G10730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37898 : 237.0) no description available & (gnl|cdd|87361 : 136.0) no description available & (reliability: 654.0) & (original description: Putative SUN1, Description = Protein SAD1/UNC-84 domain protein 1, PFAM = PF07738)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold4801_18324-21204' '(at1g52510 : 170.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G12830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative At1g52510, Description = Alpha/beta fold hydrolase, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold4801_21892-27038' '(at1g52510 : 242.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G12830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 484.0) & (original description: Putative xd6, Description = Alpha/beta fold hydrolase, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold5055_3807-7562' '(at5g19820 : 206.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37382 : 154.0) no description available & (reliability: 412.0) & (original description: Putative emb2734, Description = Importin-5, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold5120_80836-91381' '(at4g11790 : 192.0) Pleckstrin homology (PH) domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein 1 (InterPro:IPR000156), Pleckstrin homology-type (InterPro:IPR011993); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37935 : 116.0) no description available & (gnl|cdd|29845 : 88.0) no description available & (reliability: 384.0) & (original description: Putative BnaA02g21600D, Description = BnaA02g21600D protein, PFAM = PF00638)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold5122_111687-118892' '(at1g63300 : 585.0) Myosin heavy chain-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: Myosin heavy chain-related protein (TAIR:AT5G41140.1); Has 241668 Blast hits to 113961 proteins in 3668 species: Archae - 3215; Bacteria - 50568; Metazoa - 96634; Fungi - 19056; Plants - 12907; Viruses - 1139; Other Eukaryotes - 58149 (source: NCBI BLink). & (gnl|cdd|35383 : 107.0) no description available & (gnl|cdd|31389 : 80.8) no description available & (reliability: 1170.0) & (original description: Putative PGSC0003DMG400005777, Description = EEIG1/EHBP1 N-terminal domain-containing protein, PFAM = PF10358)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold5158_100666-106163' '(at2g03780 : 360.0) Translin family protein; FUNCTIONS IN: sequence-specific DNA binding, DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translin, C-terminal (InterPro:IPR016069), Translin (InterPro:IPR002848), Translin, N-terminal (InterPro:IPR016068); Has 561 Blast hits to 561 proteins in 195 species: Archae - 92; Bacteria - 2; Metazoa - 209; Fungi - 153; Plants - 36; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|38276 : 289.0) no description available & (gnl|cdd|85824 : 169.0) no description available & (reliability: 720.0) & (original description: Putative TRAX, Description = Translin-associated factor X, PFAM = PF01997)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold5263_59285-62568' '(at4g18760 : 296.0) receptor like protein 51 (RLP51); INVOLVED IN: signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 55 (TAIR:AT5G45770.1); Has 79225 Blast hits to 27308 proteins in 1069 species: Archae - 23; Bacteria - 3934; Metazoa - 14197; Fungi - 996; Plants - 54596; Viruses - 12; Other Eukaryotes - 5467 (source: NCBI BLink). & (reliability: 592.0) & (original description: Putative RLP51, Description = Receptor-like protein 51, PFAM = PF13855)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold5339_126265-146326' '(at2g25530 : 770.0) AFG1-like ATPase family protein; FUNCTIONS IN: ATPase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AFG1-like (InterPro:IPR005654); BEST Arabidopsis thaliana protein match is: AFG1-like ATPase family protein (TAIR:AT4G28070.2); Has 3822 Blast hits to 3815 proteins in 1065 species: Archae - 0; Bacteria - 1862; Metazoa - 150; Fungi - 200; Plants - 101; Viruses - 0; Other Eukaryotes - 1509 (source: NCBI BLink). & (gnl|cdd|37594 : 393.0) no description available & (gnl|cdd|31674 : 243.0) no description available & (reliability: 1540.0) & (original description: Putative BnaC08g33420D, Description = BnaC08g33420D protein, PFAM = PF03969)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold5351_33191-71045' '(at5g17370 : 168.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37906 : 164.0) no description available & (reliability: 336.0) & (original description: Putative glysoja_026430, Description = DDB1-and CUL4-associated factor 4, PFAM = PF00400)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold5399_29159-38825' '(at3g18500 : 398.0) DNAse I-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G73875.1). & (gnl|cdd|37549 : 150.0) no description available & (gnl|cdd|34836 : 82.7) no description available & (reliability: 796.0) & (original description: Putative DXPS3, Description = Carbon catabolite repressor protein 4 like 3, PFAM = PF03372)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold5541_46522-52925' '(at2g34460 : 347.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G18890.1); Has 4817 Blast hits to 4761 proteins in 1319 species: Archae - 56; Bacteria - 3261; Metazoa - 151; Fungi - 101; Plants - 561; Viruses - 0; Other Eukaryotes - 687 (source: NCBI BLink). & (gnl|cdd|36417 : 177.0) no description available & (reliability: 694.0) & (original description: Putative At2g34460, Description = Uncharacterized protein At2g34460, chloroplastic, PFAM = PF13460)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold5570_24001-36266' '(at5g24710 : 1719.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 53337 Blast hits to 28879 proteins in 1972 species: Archae - 196; Bacteria - 12524; Metazoa - 15998; Fungi - 8175; Plants - 2336; Viruses - 1195; Other Eukaryotes - 12913 (source: NCBI BLink). & (reliability: 3438.0) & (original description: Putative Sb03g029780, Description = Putative uncharacterized protein Sb03g029780, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold5632_46461-57782' '(at4g20325 : 322.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit B (InterPro:IPR019024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|88013 : 137.0) no description available & (gnl|cdd|39903 : 95.9) no description available & (reliability: 644.0) & (original description: Putative At4g20325, Description = Ribonuclease H2 subunit B domain-containing protein, PFAM = PF09468)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold5647_6383-24557' '(at5g09860 : 778.0) Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.; THO1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: production of ta-siRNAs involved in RNA interference, gene silencing by RNA; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: THO complex, subunit THOC1 (InterPro:IPR021861). & (gnl|cdd|37702 : 483.0) no description available & (reliability: 1556.0) & (original description: Putative THO1, Description = THO complex subunit 1, PFAM = PF11957;PF11957)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold5654_90914-103867' '(at1g13030 : 162.0) sphere organelles protein-related; Has 14464 Blast hits to 9695 proteins in 837 species: Archae - 14; Bacteria - 1320; Metazoa - 4989; Fungi - 1376; Plants - 652; Viruses - 103; Other Eukaryotes - 6010 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative COIL, Description = Atcoilin, PFAM = PF15862)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold5726_14160-42924' '(at1g25210 : 370.0) UDP-3-O-acyl N-acetylglycosamine deacetylase family protein; FUNCTIONS IN: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity; INVOLVED IN: lipid A biosynthetic process; CONTAINS InterPro DOMAIN/s: UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal (InterPro:IPR015870), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), UDP-3-O-acyl N-acetylglucosamine deacetylase (InterPro:IPR004463), UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (InterPro:IPR011334); BEST Arabidopsis thaliana protein match is: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein (TAIR:AT1G24793.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86297 : 246.0) no description available & (reliability: 740.0) & (original description: Putative LPXC1, Description = Probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, PFAM = PF03331)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold5938_89918-103607' '(at1g60670 : 184.0) Protein of unknown function (DUF3755); INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3755 (InterPro:IPR022228); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3755) (TAIR:AT1G10820.2); Has 165 Blast hits to 165 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative DRIF1, Description = At1g10820, PFAM = PF12579)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold6035_15401-21094' '(at1g16040 : 186.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GPI biosynthesis protein Pig-F (InterPro:IPR009580); Has 280 Blast hits to 280 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 111; Plants - 44; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|70180 : 142.0) no description available & (reliability: 372.0) & (original description: Putative BnaA09g56460D, Description = BnaA09g56460D protein, PFAM = PF06699)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold6132_62528-65028' '(gnl|cdd|70750 : 110.0) no description available & (gnl|cdd|38698 : 109.0) no description available & (at1g74340 : 108.0) dolichol phosphate-mannose biosynthesis regulatory protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: macromolecule biosynthetic process; LOCATED IN: integral to endoplasmic reticulum membrane, endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dolichol phosphate-mannose biosynthesis regulatory (InterPro:IPR009914); Has 224 Blast hits to 224 proteins in 115 species: Archae - 0; Bacteria - 0; Metazoa - 93; Fungi - 78; Plants - 25; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative DPM2, Description = Dolichol phosphate-mannose biosynthesis regulatory protein, PFAM = PF07297)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold6149_66366-68863' '(at1g52870 : 93.6) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT4G03410.2); Has 1371 Blast hits to 1369 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 561; Fungi - 316; Plants - 329; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative At1g52870, Description = Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold6206_85265-105751' '(at4g10030 : 463.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G52570.1); Has 3883 Blast hits to 3883 proteins in 1174 species: Archae - 26; Bacteria - 2816; Metazoa - 266; Fungi - 159; Plants - 102; Viruses - 3; Other Eukaryotes - 511 (source: NCBI BLink). & (gnl|cdd|37593 : 202.0) no description available & (reliability: 926.0) & (original description: Putative Sb03g042030, Description = Putative uncharacterized protein Sb03g042030, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold6208_13689-19644' '(at5g01580 : 218.0) thiol reductase in OAS metabolism; OAS HIGH ACCUMULATION 1 (OSH1); FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Gamma interferon inducible lysosomal thiol reductase GILT (InterPro:IPR004911); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G07080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38370 : 188.0) no description available & (gnl|cdd|86280 : 100.0) no description available & (reliability: 436.0) & (original description: Putative Os01g0828200, Description = Os01g0828200 protein, PFAM = PF03227)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold6222_1987-8353' '(at2g44280 : 281.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G60070.1); Has 255 Blast hits to 249 proteins in 88 species: Archae - 0; Bacteria - 68; Metazoa - 102; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|40027 : 168.0) no description available & (reliability: 554.0) & (original description: Putative LOC100381440, Description = BnaA04g25640D protein, PFAM = PF13347)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold6314_90025-95486' '(at3g15000 : 230.0) cobalt ion binding; FUNCTIONS IN: cobalt ion binding; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT3G06790.2); Has 57621 Blast hits to 29750 proteins in 1231 species: Archae - 14; Bacteria - 7130; Metazoa - 26978; Fungi - 8402; Plants - 8184; Viruses - 944; Other Eukaryotes - 5969 (source: NCBI BLink). & (q38732|dag_antma : 117.0) DAG protein, chloroplast precursor - Antirrhinum majus (Garden snapdragon) & (reliability: 460.0) & (original description: Putative DAG, Description = Plastid developmental protein DAG, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold6567_9870-23556' '(at5g19820 : 641.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37382 : 523.0) no description available & (reliability: 1282.0) & (original description: Putative PGSC0003DMG400029568, Description = Importin-5, PFAM = PF13646)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold6629_2716-22626' '(at5g09390 : 224.0) CD2-binding protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: suppressor of abi3-5 (TAIR:AT3G54230.2); Has 985 Blast hits to 963 proteins in 202 species: Archae - 8; Bacteria - 24; Metazoa - 477; Fungi - 147; Plants - 129; Viruses - 0; Other Eukaryotes - 200 (source: NCBI BLink). & (gnl|cdd|38161 : 104.0) no description available & (reliability: 448.0) & (original description: Putative At5g09390, Description = AT5g09390/T5E8_190, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold6640_65841-81990' '(at5g37530 : 481.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: co-factor for nitrate, reductase and xanthine dehydrogenase 5 (TAIR:AT5G55130.1); Has 12378 Blast hits to 12300 proteins in 2371 species: Archae - 214; Bacteria - 8305; Metazoa - 788; Fungi - 632; Plants - 298; Viruses - 0; Other Eukaryotes - 2141 (source: NCBI BLink). & (gnl|cdd|37229 : 414.0) no description available & (gnl|cdd|30110 : 271.0) no description available & (reliability: 962.0) & (original description: Putative TCD2, Description = Ubiquitin-protein ligase molybdopterin-converting factor, PFAM = PF00899)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold6649_89081-95332' '(at1g28410 : 103.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT4G31340.2); Has 425 Blast hits to 402 proteins in 77 species: Archae - 4; Bacteria - 22; Metazoa - 249; Fungi - 4; Plants - 98; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative , Description = Putative coiled-coil domain-containing protein 18-like, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold6659_35807-38706' '(at3g05940 : 246.0) Protein of unknown function (DUF300); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT5G26740.3); Has 926 Blast hits to 920 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 354; Fungi - 191; Plants - 245; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (gnl|cdd|37852 : 95.4) no description available & (reliability: 466.0) & (original description: Putative At3g05940, Description = AT5G26740 protein, PFAM = PF03619)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold7052_72184-74762' '(at5g25280 : 106.0) serine-rich protein-related; BEST Arabidopsis thaliana protein match is: serine-rich protein-related (TAIR:AT5G11090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative , Description = Dual specificity tyrosine-phosphorylation-regulated kinase-like, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold7114_73466-79527' '(at3g07140 : 726.0) GPI transamidase component Gpi16 subunit family protein; FUNCTIONS IN: GPI-anchor transamidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gpi16 subunit, GPI transamidase component (InterPro:IPR007245); Has 383 Blast hits to 363 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 164; Fungi - 131; Plants - 68; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|37618 : 503.0) no description available & (gnl|cdd|86547 : 503.0) no description available & (reliability: 1452.0) & (original description: Putative At3g07140, Description = GPI transamidase component Gpi16 subunit family protein, PFAM = PF04113)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold7212_15155-27479' '(at5g46150 : 465.0) LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284, transmembrane eukaryotic (InterPro:IPR005045); BEST Arabidopsis thaliana protein match is: ALA-interacting subunit 1 (TAIR:AT3G12740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38163 : 379.0) no description available & (gnl|cdd|67019 : 268.0) no description available & (reliability: 930.0) & (original description: Putative ALIS2, Description = Putative ALA-interacting subunit 2, PFAM = PF03381)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold7288_1-17297' '(at5g42770 : 165.0) Maf-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Maf-like protein (InterPro:IPR003697); BEST Arabidopsis thaliana protein match is: Maf-like protein (TAIR:AT5G66550.1). & (gnl|cdd|36722 : 88.9) no description available & (reliability: 330.0) & (original description: Putative Maf3, Description = Maf-like protein, PFAM = PF02545)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold7855_49093-53672' '(at1g17070 : 273.0) GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tuftelin interacting protein N-terminal (InterPro:IPR022159), D111/G-patch (InterPro:IPR000467); BEST Arabidopsis thaliana protein match is: GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain (TAIR:AT2G42330.2); Has 1264 Blast hits to 1232 proteins in 250 species: Archae - 2; Bacteria - 6; Metazoa - 735; Fungi - 146; Plants - 190; Viruses - 1; Other Eukaryotes - 184 (source: NCBI BLink). & (gnl|cdd|37395 : 164.0) no description available & (reliability: 546.0) & (original description: Putative STIPL1, Description = Tuftelin-interacting protein 11, PFAM = PF12457;PF01585)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold7865_42347-45040' '(at3g57000 : 182.0) nucleolar essential protein-related; CONTAINS InterPro DOMAIN/s: Ribosomal biogenesis, methyltransferase, EMG1/NEP1 (InterPro:IPR005304); Has 1079 Blast hits to 938 proteins in 280 species: Archae - 143; Bacteria - 12; Metazoa - 353; Fungi - 181; Plants - 69; Viruses - 2; Other Eukaryotes - 319 (source: NCBI BLink). & (gnl|cdd|38283 : 163.0) no description available & (gnl|cdd|86374 : 127.0) no description available & (reliability: 364.0) & (original description: Putative mra1, Description = Ribosomal RNA small subunit methyltransferase NEP1, PFAM = PF03587)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold7886_13703-21873' '(at3g06170 : 523.0) Serinc-domain containing serine and sphingolipid biosynthesis protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TMS membrane protein/tumour differentially expressed protein (InterPro:IPR005016); BEST Arabidopsis thaliana protein match is: Serinc-domain containing serine and sphingolipid biosynthesis protein (TAIR:AT1G16180.2); Has 780 Blast hits to 771 proteins in 184 species: Archae - 0; Bacteria - 2; Metazoa - 443; Fungi - 127; Plants - 140; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|37803 : 380.0) no description available & (gnl|cdd|66988 : 343.0) no description available & (reliability: 1046.0) & (original description: Putative At3g06170, Description = At3g06170, PFAM = PF03348)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold7888_14623-25361' '(at2g25830 : 335.0) YebC-related; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF28 (InterPro:IPR002876), Integrase, N-terminal zinc-binding domain-like (InterPro:IPR017856); Has 8692 Blast hits to 8692 proteins in 2830 species: Archae - 0; Bacteria - 6166; Metazoa - 76; Fungi - 120; Plants - 47; Viruses - 0; Other Eukaryotes - 2283 (source: NCBI BLink). & (gnl|cdd|38183 : 247.0) no description available & (gnl|cdd|85626 : 221.0) no description available & (reliability: 670.0) & (original description: Putative At2g25830, Description = Probable transcriptional regulatory protein At2g25830, PFAM = PF01709)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold8282_2025-5033' '(at1g14620 : 238.0) DECOY (DECOY); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L46 (InterPro:IPR021757); Has 231 Blast hits to 231 proteins in 117 species: Archae - 0; Bacteria - 2; Metazoa - 68; Fungi - 103; Plants - 44; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|39748 : 145.0) no description available & (gnl|cdd|72898 : 81.5) no description available & (reliability: 476.0) & (original description: Putative DECOY, Description = At1g14620/T5E21_15, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold8436_5218-16095' '(at5g19820 : 1030.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37382 : 689.0) no description available & (reliability: 2060.0) & (original description: Putative emb2734, Description = Protein EMBRYO DEFECTIVE 2734, PFAM = PF02985;PF13646)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold8471_2796-5908' '(at2g40190 : 144.0) Encodes a putative alpha-1,2-mannosyltransferase in N-linked glycoprotein (homologous to yeast ALG11). Plays vital roles in cell-wall biosynthesis and abiotic stress response. Located in endoplasmic reticulum membrane.; LEAF WILTING 3 (LEW3); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G78800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36601 : 86.5) no description available & (reliability: 288.0) & (original description: Putative GlT, Description = GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase, PFAM = PF15924)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold8653_12111-22020' '(at2g28390 : 466.0) SAND family protein; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar fusion protein MON1 (InterPro:IPR004353); Has 753 Blast hits to 594 proteins in 226 species: Archae - 6; Bacteria - 38; Metazoa - 289; Fungi - 213; Plants - 47; Viruses - 3; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|66814 : 192.0) no description available & (gnl|cdd|36215 : 173.0) no description available & (reliability: 932.0) & (original description: Putative At2g28390, Description = At2g28390/T1B3.9, PFAM = PF03164)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold8681_25319-28908' '(at5g19290 : 312.0) alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G14980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36668 : 225.0) no description available & (gnl|cdd|32448 : 86.2) no description available & (reliability: 624.0) & (original description: Putative At5g14980, Description = Esterase/lipase/thioesterase family protein, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold8697_8529-14416' '(at1g31600 : 370.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G02485.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39378 : 116.0) no description available & (reliability: 740.0) & (original description: Putative At1g31600, Description = tRNA methyltransferase 9, PFAM = PF00076;PF13532)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold9271_13521-22438' '(at3g23980 : 245.0) Encodes a protein that interacts with the Polycomb-group (Pc-G) histone methyltransferase CLF (CURLY LEAF). It colocalizes with CLF to the nucleus and represses a subset of Pc-G target genes. The pleiotropic developmental mutant phenotype suggests that BLI prevents premature differentiation.; BLISTER (BLI); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: flower development, seed development, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 32015 Blast hits to 19612 proteins in 1632 species: Archae - 290; Bacteria - 4748; Metazoa - 14972; Fungi - 3061; Plants - 1469; Viruses - 92; Other Eukaryotes - 7383 (source: NCBI BLink). & (reliability: 490.0) & (original description: Putative BLI, Description = BLISTER-like protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold9693_3481-9029' '(gnl|cdd|35504 : 519.0) no description available & (at5g24320 : 489.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G53500.1); Has 26091 Blast hits to 16604 proteins in 671 species: Archae - 60; Bacteria - 5328; Metazoa - 9578; Fungi - 5238; Plants - 2794; Viruses - 3; Other Eukaryotes - 3090 (source: NCBI BLink). & (gnl|cdd|29257 : 117.0) no description available & (reliability: 978.0) & (original description: Putative Pmc733, Description = Putative copper-inducible 35.6 kDa protein, PFAM = PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'nbv0.5scaffold26981_1-1156' '(at1g02260 : 248.0) Divalent ion symporter; FUNCTIONS IN: citrate transmembrane transporter activity, transporter activity; INVOLVED IN: citrate transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Divalent ion symporter (InterPro:IPR004680); Has 9789 Blast hits to 6672 proteins in 1812 species: Archae - 302; Bacteria - 8135; Metazoa - 259; Fungi - 87; Plants - 203; Viruses - 2; Other Eukaryotes - 801 (source: NCBI BLink). & (gnl|cdd|37850 : 181.0) no description available & (gnl|cdd|29731 : 155.0) no description available & (reliability: 496.0) & (original description: Putative lsi2, Description = Putative transporter arsB, PFAM = PF03600)' T '35.1' 'not assigned.no ontology' 'niben044ctg25886763_1-2746' '(at1g27760 : 135.0) Encodes a protein with similarity to human interferon-related developmental regulator (IFRD)that is involved in salt tolerance. Loss of function mutations are hypersensitive to salt stress and have reduced fertility. SAT32 is found in the cytoplasm but appears to translocate to the nucleus when plants are subject to salt stress.; SALT-TOLERANCE 32 (SAT32); FUNCTIONS IN: binding; INVOLVED IN: response to salt stress; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Interferon-related developmental regulator, N-terminal (InterPro:IPR007701), Interferon-related developmental regulator, C-terminal (InterPro:IPR006921), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative , Description = , PFAM = PF05004)' T '35.1' 'not assigned.no ontology' 'niben044scf00000028ctg003_4301-7259' '(at1g28280 : 147.0) VQ motif-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT2G33780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative VQ4, Description = VQ motif-containing protein 4, PFAM = PF05678)' T '35.1' 'not assigned.no ontology' 'niben044scf00000049ctg008_3018-8477' '(at3g02930 : 227.0) Plant protein of unknown function (DUF827); LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT5G16730.1). & (gnl|cdd|35383 : 91.1) no description available & (reliability: 452.0) & (original description: Putative T29A15, Description = WEB family plant protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00000119ctg002_7374-21246' '(at4g24970 : 714.0) Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; FUNCTIONS IN: ATP binding; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (TAIR:AT5G50780.1); Has 769 Blast hits to 718 proteins in 131 species: Archae - 4; Bacteria - 82; Metazoa - 313; Fungi - 18; Plants - 223; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|37056 : 479.0) no description available & (reliability: 1366.0) & (original description: Putative MORC4, Description = Protein MICRORCHIDIA 4, PFAM = PF13589)' T '35.1' 'not assigned.no ontology' 'niben044scf00000336ctg003_1-6295' '(at3g18140 : 418.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G22040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35536 : 363.0) no description available & (gnl|cdd|29257 : 129.0) no description available & (reliability: 836.0) & (original description: Putative lst8, Description = WD-repeat protein pop3, PFAM = PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben044scf00000357ctg015_12863-16851' '(at3g44510 : 397.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, root; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G08310.1). & (reliability: 718.0) & (original description: Putative At3g44510, Description = Alpha/beta-hydrolases family protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben044scf00000370ctg014_16703-19146' '(at3g27090 : 154.0) DCD (Development and Cell Death) domain protein; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G42050.1); Has 746 Blast hits to 671 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 441 (source: NCBI BLink). & (p37707|b2_dauca : 131.0) B2 protein - Daucus carota (Carrot) & (reliability: 308.0) & (original description: Putative , Description = Predicted protein, PFAM = PF10539)' T '35.1' 'not assigned.no ontology' 'niben044scf00000387ctg006_11427-17426' '(at4g15610 : 125.0) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT3G06390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68120 : 99.7) no description available & (reliability: 250.0) & (original description: Putative IN26, Description = CASP-like protein, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben044scf00000416ctg000_2487-6223' '(at5g64440 : 328.0) AtFAAH (fatty acid amide hydrolase) modulates endogenous NAEs (N-Acylethanolamines) levels in plants by hydrolyzing NAEs to ethanolamine and their corresponding free fatty acids. NAE depletion likely participates in the regulation of plant growth.; fatty acid amide hydrolase (FAAH); FUNCTIONS IN: N-(long-chain-acyl)ethanolamine deacylase activity, amidase activity; INVOLVED IN: defense response to bacterium; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT3G25660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36425 : 164.0) no description available & (gnl|cdd|30503 : 158.0) no description available & (reliability: 656.0) & (original description: Putative FAAH, Description = Fatty acid amide hydrolase, PFAM = PF01425)' T '35.1' 'not assigned.no ontology' 'niben044scf00000538ctg017_36134-41204' '(at5g47540 : 293.0) Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT4G17270.1); Has 570 Blast hits to 568 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 142; Plants - 154; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|36779 : 242.0) no description available & (gnl|cdd|87570 : 224.0) no description available & (reliability: 552.0) & (original description: Putative hymA, Description = Conidiophore development protein hymA, PFAM = PF08569)' T '35.1' 'not assigned.no ontology' 'niben044scf00000539ctg020_1-3139' '(at5g50530 : 211.0) CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein (TAIR:AT5G50640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative At5g50530, Description = Cystathionine beta-synthase, core, PFAM = PF00564)' T '35.1' 'not assigned.no ontology' 'niben044scf00000603ctg002_1-2208' '(gnl|cdd|28751 : 219.0) no description available & (at4g39730 : 210.0) Lipase/lipooxygenase, PLAT/LH2 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976); BEST Arabidopsis thaliana protein match is: Lipase/lipooxygenase, PLAT/LH2 family protein (TAIR:AT2G22170.1); Has 247 Blast hits to 225 proteins in 46 species: Archae - 0; Bacteria - 3; Metazoa - 94; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 420.0) & (original description: Putative At2g22170, Description = Expressed protein, PFAM = PF01477)' T '35.1' 'not assigned.no ontology' 'niben044scf00000703ctg000_1-1897' '(at5g54880 : 162.0) DTW domain-containing protein; CONTAINS InterPro DOMAIN/s: DTW (InterPro:IPR005636); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67552 : 118.0) no description available & (gnl|cdd|39583 : 80.6) no description available & (reliability: 324.0) & (original description: Putative PGSC0003DMG400042605, Description = DTW domain protein, PFAM = PF03942)' T '35.1' 'not assigned.no ontology' 'niben044scf00000841ctg021_1-2697' '(at4g34140 : 115.0) D111/G-patch domain-containing protein; FUNCTIONS IN: nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: D111/G-patch (InterPro:IPR000467); BEST Arabidopsis thaliana protein match is: suppressor of abi3-5 (TAIR:AT3G54230.2). & (reliability: 230.0) & (original description: Putative At4g34140, Description = D111/G-patch domain-containing protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00000879ctg009_72-6565' '(at3g14120 : 238.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport; LOCATED IN: nuclear pore; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear pore protein 84/107 (InterPro:IPR007252). & (gnl|cdd|67726 : 93.9) no description available & (reliability: 476.0) & (original description: Putative NUP107, Description = Nuclear pore complex protein NUP107, PFAM = PF04121)' T '35.1' 'not assigned.no ontology' 'niben044scf00000911ctg002_112-6107' '(at5g19820 : 622.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37382 : 421.0) no description available & (reliability: 1244.0) & (original description: Putative emb2734, Description = Importin-5, PFAM = PF00514;PF13646)' T '35.1' 'not assigned.no ontology' 'niben044scf00000941ctg005_14167-18256' '(at3g03420 : 221.0) Ku70-binding family protein; CONTAINS InterPro DOMAIN/s: Peptidase M76, ATP23 (InterPro:IPR019165); Has 337 Blast hits to 337 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 95; Fungi - 144; Plants - 46; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|38524 : 173.0) no description available & (reliability: 442.0) & (original description: Putative ATP23, Description = Ku70-binding family protein, PFAM = PF09768)' T '35.1' 'not assigned.no ontology' 'niben044scf00000970ctg017_1810-14604' '(at1g27752 : 677.0) Ubiquitin system component Cue protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39701 : 319.0) no description available & (reliability: 1354.0) & (original description: Putative BnaA09g40770D, Description = BnaA09g40770D protein, PFAM = PF02845)' T '35.1' 'not assigned.no ontology' 'niben044scf00001056ctg010_2326-8458' '(at2g28390 : 457.0) SAND family protein; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar fusion protein MON1 (InterPro:IPR004353); Has 753 Blast hits to 594 proteins in 226 species: Archae - 6; Bacteria - 38; Metazoa - 289; Fungi - 213; Plants - 47; Viruses - 3; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|66814 : 186.0) no description available & (gnl|cdd|36215 : 174.0) no description available & (reliability: 914.0) & (original description: Putative At2g28390, Description = At2g28390/T1B3.9, PFAM = PF03164)' T '35.1' 'not assigned.no ontology' 'niben044scf00001133ctg000_1-8490' '(at5g19830 : 333.0) Peptidyl-tRNA hydrolase family protein; FUNCTIONS IN: aminoacyl-tRNA hydrolase activity; INVOLVED IN: translation; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-tRNA hydrolase, conserved site (InterPro:IPR018171), Peptidyl-tRNA hydrolase (InterPro:IPR001328); BEST Arabidopsis thaliana protein match is: Peptidyl-tRNA hydrolase family protein (TAIR:AT5G16140.2); Has 7915 Blast hits to 7912 proteins in 2585 species: Archae - 0; Bacteria - 5291; Metazoa - 47; Fungi - 78; Plants - 126; Viruses - 0; Other Eukaryotes - 2373 (source: NCBI BLink). & (gnl|cdd|48347 : 306.0) no description available & (gnl|cdd|37466 : 208.0) no description available & (reliability: 666.0) & (original description: Putative pth, Description = Peptidyl-tRNA hydrolase, PFAM = PF01195)' T '35.1' 'not assigned.no ontology' 'niben044scf00001142ctg006_6641-12011' '(at3g18940 : 324.0) clast3-related; CONTAINS InterPro DOMAIN/s: Proteasome assembly chaperone 2, eukaryotic (InterPro:IPR016562), Proteasome assembly chaperone 2 (InterPro:IPR019151); Has 249 Blast hits to 248 proteins in 114 species: Archae - 1; Bacteria - 0; Metazoa - 124; Fungi - 51; Plants - 58; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|38322 : 255.0) no description available & (reliability: 648.0) & (original description: Putative At3g18940, Description = Proteasome assembly chaperone 2, PFAM = PF09754)' T '35.1' 'not assigned.no ontology' 'niben044scf00001177ctg000_345-10992' '(at4g27860 : 119.0) vacuolar iron transporter (VIT) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: embryo, hypocotyl, root, pedicel, leaf; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217), Cytokine, IL-1-like (InterPro:IPR008996); BEST Arabidopsis thaliana protein match is: Vacuolar iron transporter (VIT) family protein (TAIR:AT4G27870.1). & (reliability: 238.0) & (original description: Putative PGSC0003DMG400027948, Description = Vacuolar iron transporter-like protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00001246ctg011_38194-56555' '(at4g08310 : 172.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone chaperone domain CHZ (InterPro:IPR019098); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G44780.2); Has 53711 Blast hits to 33687 proteins in 1618 species: Archae - 142; Bacteria - 4400; Metazoa - 24303; Fungi - 6688; Plants - 2484; Viruses - 449; Other Eukaryotes - 15245 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative TCM_035094, Description = Uncharacterized protein isoform 2, PFAM = PF09649)' T '35.1' 'not assigned.no ontology' 'niben044scf00001382ctg004_2287-13006' '(at4g24970 : 103.0) Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; FUNCTIONS IN: ATP binding; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (TAIR:AT5G50780.1); Has 769 Blast hits to 718 proteins in 131 species: Archae - 4; Bacteria - 82; Metazoa - 313; Fungi - 18; Plants - 223; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative MTR_5g024810, Description = CW-type zinc finger protein, PFAM = PF13589)' T '35.1' 'not assigned.no ontology' 'niben044scf00001415ctg028_4476-9286' '(gnl|cdd|38091 : 165.0) no description available & (at1g10600 : 155.0) associated molecule with the SH3 domain of STAM 2 (AMSH2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: associated molecule with the SH3 domain of STAM 3 (TAIR:AT4G16144.1); Has 1117 Blast hits to 1115 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 409; Fungi - 306; Plants - 280; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative AMSH, Description = OTU domain-containing protein 5-A, PFAM = PF01398)' T '35.1' 'not assigned.no ontology' 'niben044scf00001479ctg013_1226-17210' '(at5g37530 : 631.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: co-factor for nitrate, reductase and xanthine dehydrogenase 5 (TAIR:AT5G55130.1); Has 12378 Blast hits to 12300 proteins in 2371 species: Archae - 214; Bacteria - 8305; Metazoa - 788; Fungi - 632; Plants - 298; Viruses - 0; Other Eukaryotes - 2141 (source: NCBI BLink). & (gnl|cdd|37229 : 505.0) no description available & (gnl|cdd|30110 : 280.0) no description available & (reliability: 1262.0) & (original description: Putative YEX1, Description = Uncharacterized protein YKL027W, PFAM = PF00899)' T '35.1' 'not assigned.no ontology' 'niben044scf00001487ctg008_1-5156' '(at5g38900 : 282.0) Thioredoxin superfamily protein; FUNCTIONS IN: protein disulfide oxidoreductase activity; INVOLVED IN: defense response to fungus, incompatible interaction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DSBA oxidoreductase (InterPro:IPR001853), Thioredoxin-like fold (InterPro:IPR012336); Has 2126 Blast hits to 2126 proteins in 739 species: Archae - 17; Bacteria - 1478; Metazoa - 14; Fungi - 129; Plants - 62; Viruses - 0; Other Eukaryotes - 426 (source: NCBI BLink). & (gnl|cdd|48573 : 225.0) no description available & (reliability: 564.0) & (original description: Putative Sb01g015110, Description = Putative uncharacterized protein Sb01g015110, PFAM = PF01323)' T '35.1' 'not assigned.no ontology' 'niben044scf00001604ctg010_1-3540' '(at2g32150 : 273.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Pyrimidine 5-nucleotidase (InterPro:IPR010237), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G02230.2); Has 2392 Blast hits to 2391 proteins in 515 species: Archae - 15; Bacteria - 775; Metazoa - 2; Fungi - 155; Plants - 196; Viruses - 0; Other Eukaryotes - 1249 (source: NCBI BLink). & (gnl|cdd|38319 : 230.0) no description available & (reliability: 546.0) & (original description: Putative nod33, Description = Haloacid dehalogenase-like hydrolase, PFAM = PF13419)' T '35.1' 'not assigned.no ontology' 'niben044scf00001705ctg002_4907-10406' '(at3g44510 : 172.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, root; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G08310.1). & (reliability: 320.0) & (original description: Putative At1g08310, Description = Alpha/beta hydrolase family protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00001713ctg002_42-2584' '(at1g62422 : 119.0) unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12020.1); Has 87 Blast hits to 86 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'niben044scf00001918ctg013_12150-19699' '(at5g58000 : 270.0) Reticulon family protein; LOCATED IN: endoplasmic reticulum, chloroplast; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT2G20590.1); Has 1128 Blast hits to 1113 proteins in 146 species: Archae - 0; Bacteria - 2; Metazoa - 759; Fungi - 49; Plants - 88; Viruses - 4; Other Eukaryotes - 226 (source: NCBI BLink). & (reliability: 540.0) & (original description: Putative RTNLB21, Description = Reticulon-like protein B21, PFAM = PF02453)' T '35.1' 'not assigned.no ontology' 'niben044scf00002256ctg004_6761-11384' '(at3g18260 : 184.0) Reticulon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT3G10260.2); Has 1034 Blast hits to 1032 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 545; Fungi - 2; Plants - 476; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37003 : 177.0) no description available & (gnl|cdd|66169 : 137.0) no description available & (reliability: 368.0) & (original description: Putative RTNLB14, Description = Reticulon-like protein B14, PFAM = PF02453)' T '35.1' 'not assigned.no ontology' 'niben044scf00002297ctg009_6546-9910' '(at4g23930 : 128.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT1G64450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative BnaA09g12240D, Description = BnaA09g12240D protein, PFAM = PF03168)' T '35.1' 'not assigned.no ontology' 'niben044scf00002355ctg001_6234-11302' '(at1g10190 : 214.0) Protein of Unknown Function (DUF239); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT4G15050.1); Has 640 Blast hits to 606 proteins in 22 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 4; Plants - 629; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66735 : 153.0) no description available & (reliability: 396.0) & (original description: Putative , Description = , PFAM = PF14365;PF03080)' T '35.1' 'not assigned.no ontology' 'niben044scf00002397ctg003_1-8515' '(at1g04300 : 495.0) TRAF-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like superfamily protein (TAIR:AT5G43560.2). & (gnl|cdd|58100 : 110.0) no description available & (reliability: 990.0) & (original description: Putative At4g16045, Description = Ubiquitin carboxyl-terminal hydrolase 12, PFAM = PF00917)' T '35.1' 'not assigned.no ontology' 'niben044scf00002716ctg007_5806-8131' '(at2g40190 : 149.0) Encodes a putative alpha-1,2-mannosyltransferase in N-linked glycoprotein (homologous to yeast ALG11). Plays vital roles in cell-wall biosynthesis and abiotic stress response. Located in endoplasmic reticulum membrane.; LEAF WILTING 3 (LEW3); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G78800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36601 : 89.6) no description available & (reliability: 298.0) & (original description: Putative GlT, Description = Glycosyl transferase family 1 protein, PFAM = PF15924)' T '35.1' 'not assigned.no ontology' 'niben044scf00002720ctg023_4087-17969' '(at3g15090 : 497.0) GroES-like zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT1G23740.1); Has 32555 Blast hits to 32407 proteins in 2523 species: Archae - 489; Bacteria - 20756; Metazoa - 1208; Fungi - 3376; Plants - 855; Viruses - 0; Other Eukaryotes - 5871 (source: NCBI BLink). & (gnl|cdd|36412 : 234.0) no description available & (gnl|cdd|30949 : 200.0) no description available & (q8h0m1|qorh_spiol : 111.0) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) & (reliability: 994.0) & (original description: Putative Os01g0753100, Description = Os01g0753100 protein, PFAM = PF13602;PF08240)' T '35.1' 'not assigned.no ontology' 'niben044scf00002735ctg011_1765-6231' '(at2g36290 : 471.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G74300.1); Has 970 Blast hits to 968 proteins in 224 species: Archae - 20; Bacteria - 476; Metazoa - 0; Fungi - 77; Plants - 313; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (reliability: 942.0) & (original description: Putative At2g36290, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben044scf00002918ctg001_28-2662' '(at5g14530 : 205.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G66240.1); Has 22372 Blast hits to 13576 proteins in 557 species: Archae - 62; Bacteria - 5277; Metazoa - 7900; Fungi - 4335; Plants - 2143; Viruses - 0; Other Eukaryotes - 2655 (source: NCBI BLink). & (gnl|cdd|36659 : 141.0) no description available & (reliability: 410.0) & (original description: Putative SWDB1501, Description = WD repeat protein-like, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00003022ctg023_1-3454' '(at5g50530 : 196.0) CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein (TAIR:AT5G50640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative At5g50530, Description = Cystathionine beta-synthase, core, PFAM = PF00564)' T '35.1' 'not assigned.no ontology' 'niben044scf00003165ctg002_1-1730' '(at3g58180 : 372.0) ARM repeat superfamily protein; FUNCTIONS IN: lyase activity, binding; INVOLVED IN: biological_process unknown; LOCATED IN: phycobilisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), PBS lyase HEAT-like repeat (InterPro:IPR004155); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G62530.1); Has 1934 Blast hits to 1064 proteins in 388 species: Archae - 226; Bacteria - 670; Metazoa - 295; Fungi - 345; Plants - 90; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (q2qxb3|dohha_orysa : 359.0) Deoxyhypusine hydroxylase-A (EC 1.14.99.29) (Deoxyhypusine monooxygenase-A) - Oryza sativa (Rice) & (gnl|cdd|35787 : 305.0) no description available & (reliability: 744.0) & (original description: Putative doh1, Description = DOHH, PFAM = PF13646;PF13646;PF03130)' T '35.1' 'not assigned.no ontology' 'niben044scf00003176ctg013_4716-7718' '(at4g31040 : 187.0) CemA-like proton extrusion protein-related; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CemA (InterPro:IPR004282); BEST Arabidopsis thaliana protein match is: CemA-like proton extrusion protein-related (TAIR:ATCG00530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|81000 : 91.1) no description available & (q9tkz2|cema_nepol : 81.3) Chloroplast envelope membrane protein - Nephroselmis olivacea & (reliability: 374.0) & (original description: Putative Os08g0224300, Description = Os08g0224300 protein, PFAM = PF03040)' T '35.1' 'not assigned.no ontology' 'niben044scf00003214ctg003_3244-9028' '(at2g43970 : 283.0) RNA-binding protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: ribonucleoprotein complex, nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344); BEST Arabidopsis thaliana protein match is: RNA-binding protein (TAIR:AT3G19090.1); Has 5536 Blast hits to 4258 proteins in 377 species: Archae - 4; Bacteria - 395; Metazoa - 1833; Fungi - 479; Plants - 433; Viruses - 20; Other Eukaryotes - 2372 (source: NCBI BLink). & (gnl|cdd|37066 : 270.0) no description available & (gnl|cdd|47984 : 107.0) no description available & (reliability: 566.0) & (original description: Putative Os08g0542900, Description = Os08g0542900 protein, PFAM = PF05383)' T '35.1' 'not assigned.no ontology' 'niben044scf00003413ctg003_581-13221' '(at4g26190 : 190.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; CONTAINS InterPro DOMAIN/s: NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G36540.1); Has 27570 Blast hits to 17450 proteins in 1040 species: Archae - 84; Bacteria - 2677; Metazoa - 10403; Fungi - 2363; Plants - 1406; Viruses - 96; Other Eukaryotes - 10541 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative L484_018752, Description = Uncharacterized FCP1-like domain-containing protein, PFAM = PF03031)' T '35.1' 'not assigned.no ontology' 'niben044scf00003415ctg003_1-10038' '(at3g11620 : 255.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2305 (InterPro:IPR019363); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39178 : 83.8) no description available & (reliability: 510.0) & (original description: Putative PGSC0003DMG400016416, Description = Putative uncharacterized protein At3g11620, PFAM = PF10230)' T '35.1' 'not assigned.no ontology' 'niben044scf00003559ctg007_246-6446' '(at3g60260 : 416.0) ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT2G44770.1); Has 836 Blast hits to 836 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 495; Fungi - 36; Plants - 182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|38208 : 289.0) no description available & (gnl|cdd|68305 : 230.0) no description available & (reliability: 832.0) & (original description: Putative MTR_3g085460, Description = ELMO/CED-12 family protein, PFAM = PF04727)' T '35.1' 'not assigned.no ontology' 'niben044scf00003600ctg009_789-8012' '(at1g44910 : 344.0) Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries.; pre-mRNA-processing protein 40A (PRP40A); CONTAINS InterPro DOMAIN/s: FF domain (InterPro:IPR002713), WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: pre-mRNA-processing protein 40B (TAIR:AT3G19670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35374 : 201.0) no description available & (gnl|cdd|34707 : 113.0) no description available & (reliability: 688.0) & (original description: Putative Med35, Description = Pre-mRNA-processing protein 40A, PFAM = PF01846;PF01846;PF01846;PF01846;PF00397)' T '35.1' 'not assigned.no ontology' 'niben044scf00003600ctg010_1681-8831' '(at1g44910 : 139.0) Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries.; pre-mRNA-processing protein 40A (PRP40A); CONTAINS InterPro DOMAIN/s: FF domain (InterPro:IPR002713), WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: pre-mRNA-processing protein 40B (TAIR:AT3G19670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative MED35A, Description = Protein binding protein, putative, PFAM = PF00397)' T '35.1' 'not assigned.no ontology' 'niben044scf00003617ctg004_14681-21947' '(at1g62330 : 669.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G11990.1); Has 815 Blast hits to 808 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 815; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 438.0) no description available & (reliability: 1216.0) & (original description: Putative At1g62330, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T '35.1' 'not assigned.no ontology' 'niben044scf00003823ctg042_14313-17713' '(at1g18610 : 204.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G74150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35600 : 128.0) no description available & (reliability: 408.0) & (original description: Putative At1g74150, Description = Putative uncharacterized protein F9E11.8, PFAM = PF13854;PF13418;PF13418)' T '35.1' 'not assigned.no ontology' 'niben044scf00003873ctg002_985-3577' '(at3g56880 : 90.5) VQ motif-containing protein; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: calmodulin (CAM)-binding protein of 25 kDa (TAIR:AT2G41010.1); Has 109 Blast hits to 109 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 106; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative , Description = , PFAM = PF05678)' T '35.1' 'not assigned.no ontology' 'niben044scf00003916ctg014_1-3028' '(at3g13800 : 155.0) Metallo-hydrolase/oxidoreductase superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: Metallo-hydrolase/oxidoreductase superfamily protein (TAIR:AT1G30300.1); Has 2805 Blast hits to 2783 proteins in 774 species: Archae - 62; Bacteria - 1390; Metazoa - 7; Fungi - 23; Plants - 100; Viruses - 0; Other Eukaryotes - 1223 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative At3g13800, Description = At3g13800, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00003949ctg010_20107-25110' '(at5g12460 : 358.0) Protein of unknown function (DUF604); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT2G37730.1); Has 562 Blast hits to 553 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 108; Fungi - 170; Plants - 273; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|68226 : 219.0) no description available & (gnl|cdd|37457 : 158.0) no description available & (reliability: 716.0) & (original description: Putative BnaA10g29930D, Description = BnaA10g29930D protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben044scf00003978ctg026_1-5176' '(at5g16020 : 411.0) Encodes GEX3, a plasma membrane localized protein expressed in the male gametophyte. Required for micropylar pollen tube guidance. Also plays a role during early embryogenesis.; gamete-expressed 3 (GEX3); CONTAINS InterPro DOMAIN/s: Quinonprotein alcohol dehydrogenase-like (InterPro:IPR011047); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 822.0) & (original description: Putative GEX3, Description = Protein GAMETE EXPRESSED 3, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00004113ctg003_5270-9817' '(at1g61150 : 162.0) LisH and RanBPM domains containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein, CRA domain (InterPro:IPR019589), CTLH, C-terminal LisH motif (InterPro:IPR006595), Ran binding protein-like, CRA domain (InterPro:IPR013144); BEST Arabidopsis thaliana protein match is: LisH and RanBPM domains containing protein (TAIR:AT4G09300.1); Has 726 Blast hits to 711 proteins in 198 species: Archae - 0; Bacteria - 50; Metazoa - 282; Fungi - 123; Plants - 213; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|37870 : 106.0) no description available & (reliability: 324.0) & (original description: Putative At1g11110, Description = At1g11110, PFAM = PF08513)' T '35.1' 'not assigned.no ontology' 'niben044scf00004200ctg003_1235-5181' '(at1g52200 : 189.0) PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT3G18450.1); Has 632 Blast hits to 631 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 75; Plants - 516; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86720 : 104.0) no description available & (reliability: 378.0) & (original description: Putative PCR8, Description = Protein PLANT CADMIUM RESISTANCE 8, PFAM = PF04749)' T '35.1' 'not assigned.no ontology' 'niben044scf00004208ctg001_696-2812' '(at5g60590 : 171.0) DHBP synthase RibB-like alpha/beta domain; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sua5/YciO/YrdC/YwlC (InterPro:IPR004388), DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945), Sua5/YciO/YrdC, N-terminal (InterPro:IPR006070); BEST Arabidopsis thaliana protein match is: DHBP synthase RibB-like alpha/beta domain (TAIR:AT3G01920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative yrdc, Description = YrdC domain-containing protein, mitochondrial, PFAM = PF01300)' T '35.1' 'not assigned.no ontology' 'niben044scf00004229ctg006_2813-7304' '(at3g43740 : 266.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G21090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p93194|rpk1_iponi : 114.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 532.0) & (original description: Putative LRP, Description = LRR protein, PFAM = PF08263;PF13855)' T '35.1' 'not assigned.no ontology' 'niben044scf00004324ctg007_3903-11696' '(at1g15440 : 1343.0) periodic tryptophan protein 2 (PWP2); FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Small-subunit processome, Utp12 (InterPro:IPR007148), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G11160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35512 : 1089.0) no description available & (gnl|cdd|29257 : 176.0) no description available & (p93107|pf20_chlre : 100.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 2686.0) & (original description: Putative PWP2, Description = Periodic tryptophan protein 2 homolog, PFAM = PF04003;PF00400;PF00400;PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben044scf00004461ctg004_1-8341' '(at3g02410 : 543.0) Isoprenylcysteine methylesterase-like 2 (ICME-LIKE2); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Carboxylesterase type B, active site (InterPro:IPR019826), Carboxylesterase, type B (InterPro:IPR002018), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: prenylcysteine methylesterase (TAIR:AT5G15860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31002 : 85.7) no description available & (reliability: 986.0) & (original description: Putative IMCE, Description = Probable isoprenylcysteine alpha-carbonyl methylesterase ICME, PFAM = PF00135)' T '35.1' 'not assigned.no ontology' 'niben044scf00004550ctg005_49466-60370' '(at5g12040 : 382.0) Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein; FUNCTIONS IN: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, zinc ion binding; INVOLVED IN: nitrogen compound metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010); BEST Arabidopsis thaliana protein match is: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein (TAIR:AT4G08790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36024 : 240.0) no description available & (gnl|cdd|30737 : 164.0) no description available & (reliability: 764.0) & (original description: Putative NIT2, Description = Omega-amidase NIT2, PFAM = PF00795)' T '35.1' 'not assigned.no ontology' 'niben044scf00004561ctg012_300-2457' '(at1g69800 : 185.0) Cystathionine beta-synthase (CBS) protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: SNF1-related protein kinase regulatory subunit gamma 1 (TAIR:AT3G48530.1); Has 884 Blast hits to 801 proteins in 238 species: Archae - 117; Bacteria - 172; Metazoa - 187; Fungi - 63; Plants - 180; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (gnl|cdd|73140 : 109.0) no description available & (gnl|cdd|36975 : 85.5) no description available & (reliability: 370.0) & (original description: Putative pco100151b, Description = SNF1-related protein kinase regulatory subunit gamma-1-like, PFAM = PF00571;PF00571)' T '35.1' 'not assigned.no ontology' 'niben044scf00004561ctg013_1-2777' '(at1g69800 : 192.0) Cystathionine beta-synthase (CBS) protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: SNF1-related protein kinase regulatory subunit gamma 1 (TAIR:AT3G48530.1); Has 884 Blast hits to 801 proteins in 238 species: Archae - 117; Bacteria - 172; Metazoa - 187; Fungi - 63; Plants - 180; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (gnl|cdd|36975 : 87.8) no description available & (reliability: 384.0) & (original description: Putative pco100151b, Description = SNF1-related protein kinase regulatory subunit gamma-1-like, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00004566ctg015_5534-7695' '(at4g25225 : 80.9) unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35736.2); Has 78 Blast hits to 78 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative At2g35736, Description = Putative uncharacterized protein At2g35736, PFAM = PF15054)' T '35.1' 'not assigned.no ontology' 'niben044scf00004589ctg012_4366-8706' '(at4g15050 : 251.0) Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G10190.1); Has 633 Blast hits to 604 proteins in 22 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 6; Plants - 620; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66735 : 178.0) no description available & (reliability: 468.0) & (original description: Putative BnaC01g22560D, Description = BnaC01g22560D protein, PFAM = PF03080;PF14365)' T '35.1' 'not assigned.no ontology' 'niben044scf00004731ctg000_2060-5369' '(at4g27460 : 256.0) Cystathionine beta-synthase (CBS) family protein; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein (TAIR:AT5G53750.1); Has 145 Blast hits to 145 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|36975 : 83.9) no description available & (reliability: 512.0) & (original description: Putative CBSX5, Description = CBS domain-containing protein CBSX5, PFAM = PF00571)' T '35.1' 'not assigned.no ontology' 'niben044scf00004740ctg010_3630-13397' '(at1g29120 : 488.0) Hydrolase-like protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G25770.1). & (gnl|cdd|68625 : 217.0) no description available & (gnl|cdd|39573 : 207.0) no description available & (reliability: 976.0) & (original description: Putative At1g29120, Description = Hydrolase-like protein, PFAM = PF05057)' T '35.1' 'not assigned.no ontology' 'niben044scf00004740ctg010_4314-13396' '(at1g29120 : 496.0) Hydrolase-like protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G25770.1). & (gnl|cdd|68625 : 218.0) no description available & (gnl|cdd|39573 : 212.0) no description available & (reliability: 992.0) & (original description: Putative At1g29120, Description = Hydrolase-like protein, PFAM = PF05057)' T '35.1' 'not assigned.no ontology' 'niben044scf00004799ctg002_1181-4678' '(at5g62030 : 296.0) diphthamide synthesis DPH2 family protein; CONTAINS InterPro DOMAIN/s: Diphthamide synthesis, DHP1 (InterPro:IPR016435), Diphthamide synthesis, DPH1/DHP2 (InterPro:IPR002728); BEST Arabidopsis thaliana protein match is: diphthamide synthesis DPH2 family protein (TAIR:AT3G59630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37859 : 207.0) no description available & (gnl|cdd|85730 : 172.0) no description available & (reliability: 592.0) & (original description: Putative dph1, Description = Diphthamide biosynthesis protein 1, PFAM = PF01866;PF01866)' T '35.1' 'not assigned.no ontology' 'niben044scf00004805ctg017_266-9514' '(at2g15240 : 360.0) UNC-50 family protein; CONTAINS InterPro DOMAIN/s: UNC-50 (InterPro:IPR007881); Has 331 Blast hits to 331 proteins in 162 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 93; Plants - 47; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|38222 : 282.0) no description available & (gnl|cdd|68776 : 272.0) no description available & (reliability: 720.0) & (original description: Putative gpm679, Description = UNC-50 family protein, PFAM = PF05216)' T '35.1' 'not assigned.no ontology' 'niben044scf00004898ctg013_1-1785' '(at2g39570 : 207.0) ACT domain-containing protein; FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT-like superfamily protein (TAIR:AT2G36840.1); Has 465 Blast hits to 403 proteins in 46 species: Archae - 0; Bacteria - 48; Metazoa - 0; Fungi - 0; Plants - 388; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|80397 : 110.0) no description available & (reliability: 414.0) & (original description: Putative ACR9, Description = ACT domain-containing family protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00004921ctg004_6141-14609' '(at1g16860 : 491.0) Ubiquitin-specific protease family C19-related protein; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: Ubiquitin-specific protease family C19-related protein (TAIR:AT1G78880.1); Has 605 Blast hits to 295 proteins in 85 species: Archae - 0; Bacteria - 22; Metazoa - 26; Fungi - 28; Plants - 169; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 982.0) & (original description: Putative Sb01g030324, Description = Putative uncharacterized protein Sb01g030324, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00004923ctg002_1-5299' '(at3g24090 : 813.0) glutamine-fructose-6-phosphate transaminase (isomerizing)s;sugar binding;transaminases; FUNCTIONS IN: sugar binding, transaminase activity, glutamine-fructose-6-phosphate transaminase (isomerizing) activity; INVOLVED IN: carbohydrate biosynthetic process, carbohydrate metabolic process, metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Sugar isomerase (SIS) (InterPro:IPR001347), Glucosamine-fructose-6-phosphate aminotransferase, isomerising (InterPro:IPR005855), Glutamine amidotransferase, type II (InterPro:IPR017932); Has 19000 Blast hits to 18984 proteins in 2800 species: Archae - 500; Bacteria - 10467; Metazoa - 411; Fungi - 223; Plants - 106; Viruses - 14; Other Eukaryotes - 7279 (source: NCBI BLink). & (gnl|cdd|36482 : 651.0) no description available & (gnl|cdd|30798 : 431.0) no description available & (reliability: 1626.0) & (original description: Putative glmS, Description = Isomerising glucosamine-fructose-6-phosphate aminotransferase, PFAM = PF01380;PF01380)' T '35.1' 'not assigned.no ontology' 'niben044scf00005255ctg001_827-6446' '(at1g16860 : 644.0) Ubiquitin-specific protease family C19-related protein; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: Ubiquitin-specific protease family C19-related protein (TAIR:AT1G78880.1); Has 605 Blast hits to 295 proteins in 85 species: Archae - 0; Bacteria - 22; Metazoa - 26; Fungi - 28; Plants - 169; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 1288.0) & (original description: Putative At1g16860, Description = Uncharacterized membrane protein At1g16860, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00005441ctg019_35723-41068' '(at5g09430 : 360.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G39955.1); Has 8280 Blast hits to 8277 proteins in 1491 species: Archae - 97; Bacteria - 6100; Metazoa - 351; Fungi - 79; Plants - 382; Viruses - 0; Other Eukaryotes - 1271 (source: NCBI BLink). & (gnl|cdd|36667 : 176.0) no description available & (gnl|cdd|30941 : 113.0) no description available & (reliability: 720.0) & (original description: Putative At4g39955, Description = At4g39955, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben044scf00005571ctg000_4937-10371' '(at1g59650 : 399.0) Encodes CW14.; CW14; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT1G10410.1); Has 261 Blast hits to 261 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|70520 : 253.0) no description available & (reliability: 798.0) & (original description: Putative CW14, Description = AT3G29180 protein, PFAM = PF07059)' T '35.1' 'not assigned.no ontology' 'niben044scf00005605ctg007_1-13543' '(at3g48860 : 275.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23700.1); Has 12429 Blast hits to 9751 proteins in 897 species: Archae - 180; Bacteria - 1190; Metazoa - 6552; Fungi - 1361; Plants - 886; Viruses - 50; Other Eukaryotes - 2210 (source: NCBI BLink). & (reliability: 502.0) & (original description: Putative RRP1, Description = Ripening-regulated protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00005655ctg040_3403-8096' '(at2g03810 : 91.7) 18S pre-ribosomal assembly protein gar2-related; FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cotyledon; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative At2g03810, Description = 18S pre-ribosomal assembly protein gar2-related protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00005807ctg003_1-2789' '(at1g51580 : 203.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 6723 Blast hits to 3876 proteins in 329 species: Archae - 3; Bacteria - 266; Metazoa - 4280; Fungi - 575; Plants - 1237; Viruses - 20; Other Eukaryotes - 342 (source: NCBI BLink). & (gnl|cdd|37401 : 117.0) no description available & (reliability: 406.0) & (original description: Putative At1g51580, Description = KH domain-containing protein, PFAM = PF00013;PF00013)' T '35.1' 'not assigned.no ontology' 'niben044scf00005893ctg012_3837-15213' '(at5g08390 : 206.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G23430.1); Has 114222 Blast hits to 41452 proteins in 998 species: Archae - 86; Bacteria - 11863; Metazoa - 46637; Fungi - 24709; Plants - 15354; Viruses - 6; Other Eukaryotes - 15567 (source: NCBI BLink). & (gnl|cdd|35488 : 199.0) no description available & (reliability: 412.0) & (original description: Putative Os01g0531300, Description = Os01g0531300 protein, PFAM = PF13925)' T '35.1' 'not assigned.no ontology' 'niben044scf00005981ctg004_3591-9180' '(at2g32150 : 326.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Pyrimidine 5-nucleotidase (InterPro:IPR010237), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G02230.2); Has 2392 Blast hits to 2391 proteins in 515 species: Archae - 15; Bacteria - 775; Metazoa - 2; Fungi - 155; Plants - 196; Viruses - 0; Other Eukaryotes - 1249 (source: NCBI BLink). & (gnl|cdd|38319 : 257.0) no description available & (reliability: 652.0) & (original description: Putative nod33, Description = Putative phosphatase, PFAM = PF13419)' T '35.1' 'not assigned.no ontology' 'niben044scf00006050ctg008_252-10004' '(gnl|cdd|37547 : 568.0) no description available & (at1g05350 : 556.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, catalytic activity, cofactor binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: SUMO-activating enzyme 2 (TAIR:AT2G21470.1); Has 12729 Blast hits to 12531 proteins in 2437 species: Archae - 211; Bacteria - 8204; Metazoa - 1010; Fungi - 713; Plants - 367; Viruses - 0; Other Eukaryotes - 2224 (source: NCBI BLink). & (gnl|cdd|30111 : 220.0) no description available & (reliability: 1112.0) & (original description: Putative uba5, Description = Ubiquitin-like modifier-activating enzyme 5, PFAM = PF00899)' T '35.1' 'not assigned.no ontology' 'niben044scf00006142ctg033_6536-8406' '(at5g15290 : 99.4) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT1G14160.1); Has 635 Blast hits to 635 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 635; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 198.8) & (original description: Putative CASP3, Description = CASP-like protein, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben044scf00006196ctg004_2855-11868' '(at2g35230 : 103.0) Contains a plant-specific VQ motif. Involved in endosperm growth and seed size determination. IKU1 is expressed in the early endosperm and its progenitor, the central cell.IKU1 interacts with MINI3 in the yeast two-hybrid system.; VQ motif-containing protein; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G32610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative IKU1, Description = AtVQ14, PFAM = PF05678)' T '35.1' 'not assigned.no ontology' 'niben044scf00006338ctg001_44879-51550' '(at2g01070 : 557.0) Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G72480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37779 : 434.0) no description available & (gnl|cdd|87161 : 306.0) no description available & (reliability: 1114.0) & (original description: Putative At2g01070, Description = Lung seven transmembrane receptor-like protein, PFAM = PF06814)' T '35.1' 'not assigned.no ontology' 'niben044scf00006346ctg006_2179-10289' '(at2g32590 : 498.0) LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits to 447 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other Eukaryotes - 108 (source: NCBI BLink). & (gnl|cdd|86950 : 385.0) no description available & (gnl|cdd|37539 : 353.0) no description available & (reliability: 996.0) & (original description: Putative CAPH, Description = Condensin complex subunit 2, PFAM = PF05786;PF05786)' T '35.1' 'not assigned.no ontology' 'niben044scf00006852ctg000_4812-10105' '(at3g15000 : 229.0) cobalt ion binding; FUNCTIONS IN: cobalt ion binding; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT3G06790.2); Has 57621 Blast hits to 29750 proteins in 1231 species: Archae - 14; Bacteria - 7130; Metazoa - 26978; Fungi - 8402; Plants - 8184; Viruses - 944; Other Eukaryotes - 5969 (source: NCBI BLink). & (q38732|dag_antma : 117.0) DAG protein, chloroplast precursor - Antirrhinum majus (Garden snapdragon) & (reliability: 458.0) & (original description: Putative DAG, Description = Plastid developmental protein DAG, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00006911ctg013_1-4271' '(at5g58000 : 169.0) Reticulon family protein; LOCATED IN: endoplasmic reticulum, chloroplast; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT2G20590.1); Has 1128 Blast hits to 1113 proteins in 146 species: Archae - 0; Bacteria - 2; Metazoa - 759; Fungi - 49; Plants - 88; Viruses - 4; Other Eukaryotes - 226 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative PGSC0003DMG400007900, Description = Reticulon-like protein, PFAM = PF02453)' T '35.1' 'not assigned.no ontology' 'niben044scf00006914ctg000_1-2625' '(at3g12400 : 434.0) Mutants of this gene were initially identified because of the trichome morphogenesis phenotype. Those trichomes have multiple nuclei, a defect that turns out not to be restricted to the trichomes but also in all endoreduplicating cell types. This gene encodes a ubiquitin-binding protein with sequence similarities with yeast proteins that are components of the ESCRTI-III complexes. The Arabidopsis protein is found associated with the endosome.; ELC; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Tumour susceptibility gene 101 (InterPro:IPR008883), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), Steadiness box (InterPro:IPR017916); BEST Arabidopsis thaliana protein match is: ELCH-like (TAIR:AT5G13860.1); Has 587 Blast hits to 537 proteins in 178 species: Archae - 0; Bacteria - 3; Metazoa - 278; Fungi - 177; Plants - 63; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|37602 : 361.0) no description available & (gnl|cdd|86940 : 145.0) no description available & (reliability: 820.0) & (original description: Putative ELC, Description = Protein ELC, PFAM = PF05743;PF09454)' T '35.1' 'not assigned.no ontology' 'niben044scf00007203ctg001_44405-48803' '(at3g44020 : 133.0) thylakoid lumenal P17.1 protein; Has 71 Blast hits to 71 proteins in 23 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative Sb03g035890, Description = Putative uncharacterized protein Sb03g035890, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00007307ctg012_893-8303' '(at5g50970 : 480.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G19920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35486 : 237.0) no description available & (gnl|cdd|29257 : 91.6) no description available & (reliability: 960.0) & (original description: Putative BnaC03g16200D, Description = BnaC03g16200D protein, PFAM = PF00400)' T '35.1' 'not assigned.no ontology' 'niben044scf00007725ctg009_1-4569' '(at1g56440 : 188.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: translocon at the outer membrane of chloroplasts 64-III (TAIR:AT3G17970.1). & (gnl|cdd|39847 : 148.0) no description available & (reliability: 376.0) & (original description: Putative OEP64, Description = RNA polymerase II-associated protein 3, PFAM = PF13877;PF00515;PF13181)' T '35.1' 'not assigned.no ontology' 'niben044scf00007820ctg005_1-2283' '(at1g27760 : 135.0) Encodes a protein with similarity to human interferon-related developmental regulator (IFRD)that is involved in salt tolerance. Loss of function mutations are hypersensitive to salt stress and have reduced fertility. SAT32 is found in the cytoplasm but appears to translocate to the nucleus when plants are subject to salt stress.; SALT-TOLERANCE 32 (SAT32); FUNCTIONS IN: binding; INVOLVED IN: response to salt stress; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Interferon-related developmental regulator, N-terminal (InterPro:IPR007701), Interferon-related developmental regulator, C-terminal (InterPro:IPR006921), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68573 : 96.2) no description available & (reliability: 270.0) & (original description: Putative BnaA07g08760D, Description = BnaA07g08760D protein, PFAM = PF05004;PF05004)' T '35.1' 'not assigned.no ontology' 'niben044scf00007958ctg015_3726-12127' '(at3g42660 : 1047.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), Protein of unknown function DUF3639 (InterPro:IPR022100), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G23430.1); Has 41589 Blast hits to 20655 proteins in 706 species: Archae - 66; Bacteria - 8583; Metazoa - 14223; Fungi - 8894; Plants - 4578; Viruses - 3; Other Eukaryotes - 5242 (source: NCBI BLink). & (gnl|cdd|36488 : 663.0) no description available & (gnl|cdd|29257 : 159.0) no description available & (reliability: 2094.0) & (original description: Putative Os09g0241100, Description = Os09g0241100 protein, PFAM = PF12894;PF00400;PF00400;PF12341)' T '35.1' 'not assigned.no ontology' 'niben044scf00008217ctg035_6519-9081' '(at4g34320 : 446.0) Protein of unknown function (DUF677); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, sepal, flower, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT4G34330.1); Has 254 Blast hits to 251 proteins in 19 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 0; Plants - 246; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68623 : 393.0) no description available & (reliability: 892.0) & (original description: Putative At4g34320, Description = UPF0496 protein At4g34320, PFAM = PF05055)' T '35.1' 'not assigned.no ontology' 'niben044scf00008339ctg000_6055-9104' '(at3g49890 : 101.0) unknown protein; Has 27 Blast hits to 27 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative BnaA03g40620D, Description = BnaA03g40620D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00008466ctg001_3716-8247' '(at1g17070 : 804.0) GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tuftelin interacting protein N-terminal (InterPro:IPR022159), D111/G-patch (InterPro:IPR000467); BEST Arabidopsis thaliana protein match is: GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain (TAIR:AT2G42330.2); Has 1264 Blast hits to 1232 proteins in 250 species: Archae - 2; Bacteria - 6; Metazoa - 735; Fungi - 146; Plants - 190; Viruses - 1; Other Eukaryotes - 184 (source: NCBI BLink). & (gnl|cdd|37395 : 581.0) no description available & (gnl|cdd|72121 : 278.0) no description available & (reliability: 1608.0) & (original description: Putative STIPL1, Description = Septin and tuftelin-interacting protein 1 homolog 1, PFAM = PF01585;PF07842;PF12457)' T '35.1' 'not assigned.no ontology' 'niben044scf00008576ctg025_1-2052' '(at3g48195 : 513.0) Phox (PX) domain-containing protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: intracellular signaling pathway, cell communication; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Phox-like (InterPro:IPR001683); Has 654 Blast hits to 601 proteins in 103 species: Archae - 0; Bacteria - 16; Metazoa - 551; Fungi - 11; Plants - 27; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|37040 : 157.0) no description available & (reliability: 1026.0) & (original description: Putative At3g48195, Description = Phox (PX) domain protein, PFAM = PF13901;PF00787)' T '35.1' 'not assigned.no ontology' 'niben044scf00008703ctg000_1321-5648' '(at4g18905 : 296.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G18900.1). & (gnl|cdd|35491 : 233.0) no description available & (gnl|cdd|29257 : 101.0) no description available & (reliability: 592.0) & (original description: Putative WDR1, Description = Putative WD repeat-containing protein C17D11.16, PFAM = PF00400;PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben044scf00009025ctg004_2309-10061' '(at1g44910 : 85.5) Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries.; pre-mRNA-processing protein 40A (PRP40A); CONTAINS InterPro DOMAIN/s: FF domain (InterPro:IPR002713), WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: pre-mRNA-processing protein 40B (TAIR:AT3G19670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative , Description = Pre-mRNA-processing protein 40A isoform 3, PFAM = PF00397)' T '35.1' 'not assigned.no ontology' 'niben044scf00009025ctg005_1781-14094' '(at1g44910 : 486.0) Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries.; pre-mRNA-processing protein 40A (PRP40A); CONTAINS InterPro DOMAIN/s: FF domain (InterPro:IPR002713), WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: pre-mRNA-processing protein 40B (TAIR:AT3G19670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35374 : 228.0) no description available & (gnl|cdd|34707 : 99.5) no description available & (reliability: 972.0) & (original description: Putative Med35, Description = Pre-mRNA-processing protein 40A, PFAM = PF01846;PF01846;PF01846;PF01846;PF00397)' T '35.1' 'not assigned.no ontology' 'niben044scf00009074ctg007_2345-7261' '(at4g07390 : 155.0) Mannose-P-dolichol utilization defect 1 protein; CONTAINS InterPro DOMAIN/s: Cystinosin/ERS1p repeat (InterPro:IPR006603), Mannose-P-dolichol utilization defect 1 protein (InterPro:IPR016817); BEST Arabidopsis thaliana protein match is: Mannose-P-dolichol utilization defect 1 protein (TAIR:AT5G59470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38421 : 123.0) no description available & (reliability: 310.0) & (original description: Putative pco128311, Description = Mannose-P-dolichol utilization defect 1 protein, PFAM = PF04193)' T '35.1' 'not assigned.no ontology' 'niben044scf00009074ctg010_989-4576' '(at4g07390 : 131.0) Mannose-P-dolichol utilization defect 1 protein; CONTAINS InterPro DOMAIN/s: Cystinosin/ERS1p repeat (InterPro:IPR006603), Mannose-P-dolichol utilization defect 1 protein (InterPro:IPR016817); BEST Arabidopsis thaliana protein match is: Mannose-P-dolichol utilization defect 1 protein (TAIR:AT5G59470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative pco128311, Description = BnaC02g09970D protein, PFAM = PF04193)' T '35.1' 'not assigned.no ontology' 'niben044scf00009266ctg021_3326-8143' '(gnl|cdd|66174 : 239.0) no description available & (at3g26040 : 209.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 2415 Blast hits to 2403 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 2353; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 418.0) & (original description: Putative catf2, Description = Acyl-transferase, PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'niben044scf00009282ctg000_35186-42261' '(at2g34260 : 423.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29257 : 113.0) no description available & (gnl|cdd|35487 : 101.0) no description available & (reliability: 846.0) & (original description: Putative WDR55, Description = WD repeat-containing protein 55, PFAM = PF00400)' T '35.1' 'not assigned.no ontology' 'niben044scf00009297ctg007_253-8398' '(at5g17370 : 111.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative , Description = DDB1-and CUL4-associated factor 4, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00009307ctg001_22691-27722' '(at1g26160 : 235.0) Metal-dependent phosphohydrolase; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607); BEST Arabidopsis thaliana protein match is: Metal-dependent phosphohydrolase (TAIR:AT2G23820.2); Has 1552 Blast hits to 1531 proteins in 690 species: Archae - 126; Bacteria - 959; Metazoa - 120; Fungi - 153; Plants - 73; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink). & (gnl|cdd|38407 : 232.0) no description available & (gnl|cdd|32080 : 129.0) no description available & (reliability: 470.0) & (original description: Putative HDDC2, Description = Hydrolase-HD superfamily protein, PFAM = PF13023)' T '35.1' 'not assigned.no ontology' 'niben044scf00009309ctg004_1-3088' '(at5g61330 : 231.0) rRNA processing protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TRAUB (InterPro:IPR012617); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37984 : 146.0) no description available & (gnl|cdd|71599 : 85.0) no description available & (reliability: 462.0) & (original description: Putative At5g61330, Description = Protein AATF, PFAM = PF08164)' T '35.1' 'not assigned.no ontology' 'niben044scf00009615ctg006_10594-16074' '(at3g10840 : 446.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G15490.1); Has 7044 Blast hits to 6961 proteins in 1208 species: Archae - 69; Bacteria - 5119; Metazoa - 311; Fungi - 102; Plants - 308; Viruses - 4; Other Eukaryotes - 1131 (source: NCBI BLink). & (gnl|cdd|36667 : 131.0) no description available & (gnl|cdd|30941 : 95.9) no description available & (reliability: 892.0) & (original description: Putative At3g10840, Description = Alpha/beta-hydrolase domain-containing protein, PFAM = PF00561)' T '35.1' 'not assigned.no ontology' 'niben044scf00009627ctg006_6413-9584' '(at2g14520 : 225.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein with a domain of unknown function (DUF21) (TAIR:AT4G33700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37329 : 181.0) no description available & (gnl|cdd|85556 : 92.6) no description available & (reliability: 450.0) & (original description: Putative 1294, Description = DUF21 domain-containing protein, PFAM = PF01595)' T '35.1' 'not assigned.no ontology' 'niben044scf00009632ctg011_5256-9562' '(at1g80500 : 144.0) SNARE-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, ER to Golgi vesicle-mediated transport; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sedlin (InterPro:IPR006722), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT2G20930.1); Has 584 Blast hits to 580 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 289; Fungi - 112; Plants - 97; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|38697 : 108.0) no description available & (gnl|cdd|86702 : 98.0) no description available & (reliability: 288.0) & (original description: Putative Os04g0503800, Description = Os04g0503800 protein, PFAM = PF04628)' T '35.1' 'not assigned.no ontology' 'niben044scf00009773ctg001_2834-5313' '(at3g17380 : 99.4) TRAF-like family protein; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT3G20370.1); Has 1739 Blast hits to 1291 proteins in 145 species: Archae - 0; Bacteria - 0; Metazoa - 259; Fungi - 101; Plants - 1336; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (reliability: 198.8) & (original description: Putative PGSC0003DMG400000680, Description = Ubiquitin carboxyl-terminal hydrolase 12, PFAM = PF00917)' T '35.1' 'not assigned.no ontology' 'niben044scf00010022ctg007_36634-41512' '(at3g14120 : 266.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport; LOCATED IN: nuclear pore; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear pore protein 84/107 (InterPro:IPR007252). & (reliability: 532.0) & (original description: Putative Os11g0643700, Description = Os11g0643700 protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00010027ctg009_731-4008' '(at5g66330 : 413.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT2G15320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 96.7) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|39396 : 85.1) no description available & (reliability: 826.0) & (original description: Putative At5g66330, Description = Leucine-rich repeat-containing protein, PFAM = PF13855;PF13855)' T '35.1' 'not assigned.no ontology' 'niben044scf00010121ctg007_253-3189' '(at2g36300 : 284.0) Integral membrane Yip1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Yip1 domain (InterPro:IPR006977); BEST Arabidopsis thaliana protein match is: Integral membrane Yip1 family protein (TAIR:AT3G52760.1); Has 658 Blast hits to 658 proteins in 200 species: Archae - 0; Bacteria - 0; Metazoa - 333; Fungi - 123; Plants - 111; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|38313 : 207.0) no description available & (gnl|cdd|34684 : 109.0) no description available & (reliability: 568.0) & (original description: Putative PGSC0003DMG400019486, Description = Protein YIPF, PFAM = PF04893)' T '35.1' 'not assigned.no ontology' 'niben044scf00010201ctg011_1-1678' '(at2g36360 : 259.0) Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G74150.1). & (gnl|cdd|35600 : 121.0) no description available & (reliability: 518.0) & (original description: Putative BnaA05g07880D, Description = BnaA05g07880D protein, PFAM = PF13415;PF13415)' T '35.1' 'not assigned.no ontology' 'niben044scf00010662ctg007_226-9685' '(at2g04560 : 116.0) transferases, transferring glycosyl groups; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid A biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 19 (InterPro:IPR003835); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31106 : 85.7) no description available & (reliability: 232.0) & (original description: Putative LPXB, Description = Lipid-A-disaccharide synthase, PFAM = PF02684)' T '35.1' 'not assigned.no ontology' 'niben044scf00010686ctg013_610-4954' '(at2g37160 : 281.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G53390.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37605 : 161.0) no description available & (reliability: 562.0) & (original description: Putative At2g37160, Description = Putative catabolite repression protein creC, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00010724ctg021_2271-19509' '(at1g02145 : 629.0) homolog of asparagine-linked glycosylation 12 (ALG12); FUNCTIONS IN: alpha-1,6-mannosyltransferase activity; INVOLVED IN: ER-associated protein catabolic process, protein amino acid terminal N-glycosylation; LOCATED IN: intrinsic to endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: Alg9-like mannosyltransferase (InterPro:IPR005599); BEST Arabidopsis thaliana protein match is: Alg9-like mannosyltransferase family (TAIR:AT1G16900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37727 : 359.0) no description available & (gnl|cdd|86471 : 108.0) no description available & (reliability: 1258.0) & (original description: Putative ALG12, Description = Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase, PFAM = PF03901;PF03901)' T '35.1' 'not assigned.no ontology' 'niben044scf00010736ctg005_1359-8237' '(at1g06750 : 709.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cell killing; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Zeta toxin (InterPro:IPR010488); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G30630.1). & (reliability: 1418.0) & (original description: Putative At1g06750, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF06414)' T '35.1' 'not assigned.no ontology' 'niben044scf00010757ctg005_3424-8555' '(at3g62860 : 335.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G47630.1); Has 2895 Blast hits to 2893 proteins in 1018 species: Archae - 30; Bacteria - 1827; Metazoa - 110; Fungi - 120; Plants - 454; Viruses - 49; Other Eukaryotes - 305 (source: NCBI BLink). & (gnl|cdd|36668 : 256.0) no description available & (gnl|cdd|32448 : 87.0) no description available & (reliability: 670.0) & (original description: Putative AY109678, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'niben044scf00010899ctg004_6420-12076' '(at5g18590 : 568.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 4 (TAIR:AT3G05420.1); Has 9365 Blast hits to 4668 proteins in 321 species: Archae - 14; Bacteria - 334; Metazoa - 3669; Fungi - 969; Plants - 2222; Viruses - 6; Other Eukaryotes - 2151 (source: NCBI BLink). & (gnl|cdd|35600 : 125.0) no description available & (reliability: 1136.0) & (original description: Putative Sb08g017180, Description = Putative uncharacterized protein Sb08g017180, PFAM = PF13415)' T '35.1' 'not assigned.no ontology' 'niben044scf00011007ctg028_2925-9591' '(at1g45063 : 82.8) copper ion binding;electron carriers; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: plastocyanin-like domain-containing protein (TAIR:AT3G53330.1); Has 2601 Blast hits to 1373 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2600; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|66026 : 82.3) no description available & (reliability: 165.6) & (original description: Putative BCP, Description = Blue copper protein, PFAM = PF02298;PF02298)' T '35.1' 'not assigned.no ontology' 'niben044scf00011015ctg024_5838-8725' '(at1g12650 : 155.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 (InterPro:IPR009292); Has 700 Blast hits to 631 proteins in 192 species: Archae - 0; Bacteria - 32; Metazoa - 138; Fungi - 168; Plants - 60; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). & (gnl|cdd|38400 : 104.0) no description available & (gnl|cdd|87021 : 92.0) no description available & (reliability: 310.0) & (original description: Putative At1g12650, Description = At1g12650/T12C24_1, PFAM = PF06102)' T '35.1' 'not assigned.no ontology' 'niben044scf00011092ctg002_2284-5774' '(at5g51400 : 211.0) PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT2G45010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative CNR6, Description = Cell number regulator 6, PFAM = PF04749)' T '35.1' 'not assigned.no ontology' 'niben044scf00011293ctg002_1-2592' '(at5g48960 : 178.0) HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase; FUNCTIONS IN: 5'-nucleotidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase (InterPro:IPR008380); BEST Arabidopsis thaliana protein match is: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase (TAIR:AT1G75210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative surE2, Description = HAD superfamily (Subfamily IG) hydrolase, 5'-nucleotidase, PFAM = PF05761)' T '35.1' 'not assigned.no ontology' 'niben044scf00011304ctg000_4359-6793' '(at2g20830 : 117.0) transferases;folic acid binding; FUNCTIONS IN: folic acid binding, transferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Formiminotransferase, N-terminal subdomain (InterPro:IPR012886), Formiminotransferas, N- and C-terminal subdomains (InterPro:IPR022384). & (gnl|cdd|87464 : 97.7) no description available & (gnl|cdd|39795 : 89.3) no description available & (reliability: 234.0) & (original description: Putative Sb10g027700, Description = Putative uncharacterized protein Sb10g027700, PFAM = PF09811)' T '35.1' 'not assigned.no ontology' 'niben044scf00011355ctg019_632-7248' '(at5g02970 : 564.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G09690.2); Has 911 Blast hits to 905 proteins in 207 species: Archae - 6; Bacteria - 480; Metazoa - 9; Fungi - 40; Plants - 329; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (reliability: 1128.0) & (original description: Putative Sb01g038620, Description = Putative uncharacterized protein Sb01g038620, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben044scf00011363ctg008_15859-22533' '(at3g09560 : 168.0) Lipin family protein; FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: cellular response to phosphate starvation, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: LNS2, Lipin/Ned1/Smp2 (InterPro:IPR013209), Lipin, N-terminal conserved region (InterPro:IPR007651); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphohydrolase 2 (TAIR:AT5G42870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37327 : 168.0) no description available & (gnl|cdd|68154 : 112.0) no description available & (reliability: 326.0) & (original description: Putative PAH1, Description = Phosphatidic acid phosphohydrolase, PFAM = PF04571;PF08235;PF08235)' T '35.1' 'not assigned.no ontology' 'niben044scf00011482ctg000_14526-18286' '(at5g19820 : 247.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37382 : 163.0) no description available & (reliability: 494.0) & (original description: Putative emb2734, Description = Importin-5, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00011501ctg009_1275-12725' '(at2g20320 : 883.0) DENN (AEX-3) domain-containing protein; CONTAINS InterPro DOMAIN/s: uDENN (InterPro:IPR005113), dDENN (InterPro:IPR005112), DENN (InterPro:IPR001194); BEST Arabidopsis thaliana protein match is: DENN (AEX-3) domain-containing protein (TAIR:AT5G35560.1); Has 1567 Blast hits to 1546 proteins in 147 species: Archae - 0; Bacteria - 2; Metazoa - 1072; Fungi - 78; Plants - 117; Viruses - 0; Other Eukaryotes - 298 (source: NCBI BLink). & (reliability: 1766.0) & (original description: Putative F383_03724, Description = DENN domain-containing 5B, PFAM = PF02141;PF03456)' T '35.1' 'not assigned.no ontology' 'niben044scf00011537ctg002_8116-13711' '(at1g75200 : 912.0) flavodoxin family protein / radical SAM domain-containing protein; FUNCTIONS IN: iron-sulfur cluster binding, oxidoreductase activity, FMN binding, catalytic activity; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Radical SAM (InterPro:IPR007197), Wyosine base formation (InterPro:IPR013917); BEST Arabidopsis thaliana protein match is: P450 reductase 2 (TAIR:AT4G30210.2); Has 3108 Blast hits to 3089 proteins in 883 species: Archae - 191; Bacteria - 976; Metazoa - 668; Fungi - 593; Plants - 205; Viruses - 0; Other Eukaryotes - 475 (source: NCBI BLink). & (gnl|cdd|36375 : 718.0) no description available & (gnl|cdd|31075 : 242.0) no description available & (reliability: 1824.0) & (original description: Putative TYW1, Description = S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase, PFAM = PF08608;PF04055;PF00258)' T '35.1' 'not assigned.no ontology' 'niben044scf00011638ctg002_1-2450' '(at2g18840 : 162.0) Integral membrane Yip1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Yip1 domain (InterPro:IPR006977); BEST Arabidopsis thaliana protein match is: Integral membrane Yip1 family protein (TAIR:AT4G30260.1); Has 825 Blast hits to 825 proteins in 200 species: Archae - 0; Bacteria - 0; Metazoa - 402; Fungi - 189; Plants - 114; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|38157 : 114.0) no description available & (reliability: 324.0) & (original description: Putative At2g18840, Description = Protein YIPF, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00011644ctg007_2487-9428' '(at2g46380 : 301.0) Protein of unknown function (DUF3133); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3133 (InterPro:IPR021480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3133) (TAIR:AT3G61670.1); Has 300 Blast hits to 240 proteins in 20 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 602.0) & (original description: Putative PGSC0003DMG400012301, Description = Uncharacterized protein At5g05190 family, PFAM = PF11331)' T '35.1' 'not assigned.no ontology' 'niben044scf00011663ctg026_1740-6096' '(at5g19930 : 264.0) Protein of unknown function DUF92, transmembrane; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF92, transmembrane (InterPro:IPR002794). & (gnl|cdd|39691 : 227.0) no description available & (gnl|cdd|32021 : 94.5) no description available & (reliability: 528.0) & (original description: Putative pco125769, Description = Transmembrane protein 19, PFAM = PF01940)' T '35.1' 'not assigned.no ontology' 'niben044scf00011678ctg000_1251-9158' '(at3g14010 : 340.0) hydroxyproline-rich glycoprotein family protein, similar to Mrs16p (GI:2737884) (Saccharomyces cerevisiae); weak similarity to ataxin-2 related protein (GI:1679686) (Homo sapiens). Included in a family of CTC interacting domain proteins found to interact with PAB2.; CTC-interacting domain 4 (CID4); FUNCTIONS IN: protein binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LsmAD domain (InterPro:IPR009604), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 3 (TAIR:AT1G54170.1). & (gnl|cdd|37586 : 157.0) no description available & (gnl|cdd|34779 : 104.0) no description available & (reliability: 640.0) & (original description: Putative CID4, Description = Polyadenylate-binding protein-interacting protein 4, PFAM = PF06741;PF14438)' T '35.1' 'not assigned.no ontology' 'niben044scf00011769ctg010_5986-11634' '(at5g66550 : 216.0) Maf-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Maf-like protein (InterPro:IPR003697); BEST Arabidopsis thaliana protein match is: Maf-like protein (TAIR:AT5G42770.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36722 : 145.0) no description available & (gnl|cdd|29954 : 137.0) no description available & (reliability: 432.0) & (original description: Putative Maf3, Description = Maf-like protein, PFAM = PF02545)' T '35.1' 'not assigned.no ontology' 'niben044scf00011838ctg013_1-4324' '(at1g07850 : 609.0) Protein of unknown function (DUF604); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT4G23490.1); Has 101 Blast hits to 95 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 16; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68226 : 425.0) no description available & (gnl|cdd|37457 : 286.0) no description available & (reliability: 1218.0) & (original description: Putative GT31C5, Description = Glycosyltransferase-like protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben044scf00011970ctg004_2792-6979' '(at4g22360 : 309.0) SWIB complex BAF60b domain-containing protein; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121), SWIB domain (InterPro:IPR019835), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: SWIB complex BAF60b domain-containing protein (TAIR:AT3G19080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37157 : 126.0) no description available & (gnl|cdd|47490 : 110.0) no description available & (reliability: 618.0) & (original description: Putative BnaC07g37300D, Description = BnaC07g37300D protein, PFAM = PF02201;PF02201;PF08766)' T '35.1' 'not assigned.no ontology' 'niben044scf00011976ctg002_416-6754' '(at4g23895 : 254.0) Pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: nucleoside diphosphate kinase activity, ATP binding; INVOLVED IN: UTP biosynthetic process, GTP biosynthetic process, CTP biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Nucleoside diphosphate kinase, core (InterPro:IPR001564), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Nucleoside diphosphate kinase family protein (TAIR:AT4G23900.1). & (reliability: 508.0) & (original description: Putative BnaC03g62070D, Description = BnaC03g62070D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00011985ctg003_1-2316' '(at5g45170 : 100.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT3G48420.1); Has 352 Blast hits to 346 proteins in 109 species: Archae - 0; Bacteria - 170; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative TIDP3737, Description = Haloacid dehalogenase-like hydrolase (HAD) superfamily protein, putative isoform 1, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00012024ctg012_1829-4173' '(at2g36290 : 155.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G74300.1); Has 970 Blast hits to 968 proteins in 224 species: Archae - 20; Bacteria - 476; Metazoa - 0; Fungi - 77; Plants - 313; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative umc2763, Description = Catalytic, putative, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00012024ctg024_1223-7510' '(at2g36290 : 464.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G74300.1); Has 970 Blast hits to 968 proteins in 224 species: Archae - 20; Bacteria - 476; Metazoa - 0; Fungi - 77; Plants - 313; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (reliability: 928.0) & (original description: Putative umc2763, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben044scf00012174ctg021_1-5001' '(at2g20210 : 254.0) RNI-like superfamily protein; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, ribonuclease inhibitor subtype (InterPro:IPR003590); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 508.0) & (original description: Putative BnaA07g00080D, Description = BnaA07g00080D protein, PFAM = PF13516;PF00560)' T '35.1' 'not assigned.no ontology' 'niben044scf00012292ctg002_176-3547' '(at3g03590 : 124.0) SWIB/MDM2 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121), SWIB domain (InterPro:IPR019835); BEST Arabidopsis thaliana protein match is: SWIB/MDM2 domain superfamily protein (TAIR:AT2G35605.1); Has 1268 Blast hits to 1165 proteins in 257 species: Archae - 0; Bacteria - 219; Metazoa - 186; Fungi - 200; Plants - 424; Viruses - 10; Other Eukaryotes - 229 (source: NCBI BLink). & (gnl|cdd|37157 : 109.0) no description available & (gnl|cdd|85905 : 106.0) no description available & (reliability: 248.0) & (original description: Putative pco097858, Description = SWIb domain-containing protein, PFAM = PF02201)' T '35.1' 'not assigned.no ontology' 'niben044scf00012326ctg004_1-2891' '(at5g19820 : 229.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37382 : 156.0) no description available & (reliability: 458.0) & (original description: Putative RAN BP, Description = Importin-5, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00012481ctg000_415-5390' '(at1g14310 : 325.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity, phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), HAD-superfamily hydrolase, subfamily IA, REG-2-like (InterPro:IPR011949), HAD-superfamily hydrolase, subfamily IA, variant 1 (InterPro:IPR006439); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G41250.1); Has 5555 Blast hits to 5555 proteins in 1508 species: Archae - 313; Bacteria - 4016; Metazoa - 183; Fungi - 73; Plants - 110; Viruses - 0; Other Eukaryotes - 860 (source: NCBI BLink). & (gnl|cdd|38295 : 140.0) no description available & (gnl|cdd|31215 : 95.0) no description available & (reliability: 650.0) & (original description: Putative pco077559a, Description = HAD-superfamily hydrolase, subfamily IA, variant 1, PFAM = PF13419)' T '35.1' 'not assigned.no ontology' 'niben044scf00012862ctg004_1-2957' '(at3g03610 : 313.0) ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT1G03620.1); Has 825 Blast hits to 825 proteins in 140 species: Archae - 0; Bacteria - 0; Metazoa - 481; Fungi - 44; Plants - 173; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|38208 : 220.0) no description available & (gnl|cdd|68305 : 205.0) no description available & (reliability: 626.0) & (original description: Putative , Description = ELMO/CED-12 family protein, PFAM = PF04727)' T '35.1' 'not assigned.no ontology' 'niben044scf00013051ctg018_4780-9588' '(at4g12830 : 346.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G52510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39380 : 90.7) no description available & (gnl|cdd|81168 : 82.6) no description available & (reliability: 692.0) & (original description: Putative At4g12830, Description = Hydrolase, alpha/beta fold family protein, PFAM = PF00561)' T '35.1' 'not assigned.no ontology' 'niben044scf00013112ctg002_1-5263' '(at5g11650 : 477.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G73480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36668 : 296.0) no description available & (gnl|cdd|32448 : 144.0) no description available & (reliability: 954.0) & (original description: Putative CSE16, Description = Caffeoyl shikimate esterase 16, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'niben044scf00013129ctg008_1854-7014' '(at1g50660 : 531.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20350.1); Has 21445 Blast hits to 15134 proteins in 1325 species: Archae - 461; Bacteria - 2309; Metazoa - 11052; Fungi - 1737; Plants - 1035; Viruses - 42; Other Eukaryotes - 4809 (source: NCBI BLink). & (reliability: 1062.0) & (original description: Putative Os08g0190700, Description = Os08g0190700 protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00013248ctg006_1-3927' '(at2g37240 : 143.0) Thioredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT5G65840.1); Has 368 Blast hits to 368 proteins in 75 species: Archae - 0; Bacteria - 23; Metazoa - 194; Fungi - 17; Plants - 121; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|39698 : 98.5) no description available & (gnl|cdd|48519 : 84.7) no description available & (reliability: 286.0) & (original description: Putative At2g37240, Description = AhpC/TSA antioxidant enzyme domain-containing protein 1, PFAM = PF00578)' T '35.1' 'not assigned.no ontology' 'niben044scf00013502ctg020_9776-16946' '(at2g46380 : 301.0) Protein of unknown function (DUF3133); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3133 (InterPro:IPR021480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3133) (TAIR:AT3G61670.1); Has 300 Blast hits to 240 proteins in 20 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 602.0) & (original description: Putative PGSC0003DMG400012301, Description = Uncharacterized protein At5g05190 family, PFAM = PF11331)' T '35.1' 'not assigned.no ontology' 'niben044scf00013600ctg001_12472-29632' '(at1g80810 : 163.0) Tudor/PWWP/MBT superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1); Has 103396 Blast hits to 54411 proteins in 2510 species: Archae - 599; Bacteria - 9234; Metazoa - 41155; Fungi - 13255; Plants - 5790; Viruses - 1058; Other Eukaryotes - 32305 (source: NCBI BLink). & (gnl|cdd|36738 : 123.0) no description available & (reliability: 326.0) & (original description: Putative At1g15940, Description = Putative ovule protein, PFAM = PF05278)' T '35.1' 'not assigned.no ontology' 'niben044scf00013610ctg011_4309-8740' '(at3g12050 : 462.0) Aha1 domain-containing protein; FUNCTIONS IN: ATPase activator activity, chaperone binding; INVOLVED IN: response to stress; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Activator of Hsp90 ATPase, N-terminal (InterPro:IPR015310), Activator of Hsp90 ATPase homologue 1-like (InterPro:IPR013538); Has 501 Blast hits to 499 proteins in 203 species: Archae - 0; Bacteria - 24; Metazoa - 214; Fungi - 142; Plants - 65; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|38147 : 252.0) no description available & (gnl|cdd|87842 : 106.0) no description available & (reliability: 924.0) & (original description: Putative Os08g0464000, Description = Os08g0464000 protein, PFAM = PF08327;PF09229)' T '35.1' 'not assigned.no ontology' 'niben044scf00013825ctg004_3669-9526' '(at5g16730 : 229.0) LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545), Spectrin/alpha-actinin (InterPro:IPR018159); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT3G02930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35383 : 91.8) no description available & (reliability: 458.0) & (original description: Putative T29A15, Description = WEB family plant protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00013877ctg003_251-2471' '(at5g14890 : 110.0) NHL domain-containing protein; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NHL repeat (InterPro:IPR001258), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT1G70280.2); Has 2211 Blast hits to 1172 proteins in 193 species: Archae - 21; Bacteria - 928; Metazoa - 143; Fungi - 0; Plants - 261; Viruses - 0; Other Eukaryotes - 858 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative , Description = NHL domain-containing protein, putative, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00014058ctg002_262-12256' '(at4g10050 : 228.0) esterase/lipase/thioesterase family protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073), Protein phosphatase methylesterase, eukaryotic (InterPro:IPR016812); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37775 : 174.0) no description available & (reliability: 456.0) & (original description: Putative ppe1, Description = PME-1, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben044scf00014290ctg001_1-3175' '(at2g46560 : 412.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat (InterPro:IPR001680), RAVE protein 1 C-terminal (InterPro:IPR022033), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 2273 Blast hits to 1588 proteins in 291 species: Archae - 0; Bacteria - 657; Metazoa - 469; Fungi - 690; Plants - 137; Viruses - 0; Other Eukaryotes - 320 (source: NCBI BLink). & (gnl|cdd|36282 : 304.0) no description available & (reliability: 824.0) & (original description: Putative DMXL1, Description = DmX-like protein 1, PFAM = PF12234)' T '35.1' 'not assigned.no ontology' 'niben044scf00014389ctg001_43250-46041' '(at5g49560 : 226.0) Putative methyltransferase family protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: Putative methyltransferase family protein (TAIR:AT3G50850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38004 : 153.0) no description available & (reliability: 452.0) & (original description: Putative At5g49560, Description = Putative methyltransferase family protein, PFAM = PF10294)' T '35.1' 'not assigned.no ontology' 'niben044scf00014422ctg009_10902-16001' '(at2g16595 : 229.0) Translocon-associated protein (TRAP), alpha subunit; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translocon-associated protein (TRAP), alpha subunit (InterPro:IPR005595); BEST Arabidopsis thaliana protein match is: Translocon-associated protein (TRAP), alpha subunit (TAIR:AT2G21160.1); Has 245 Blast hits to 245 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 29; Plants - 60; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|36844 : 220.0) no description available & (gnl|cdd|67507 : 87.8) no description available & (reliability: 458.0) & (original description: Putative tap1, Description = Translocon-associated protein (TRAP), alpha subunit, PFAM = PF03896)' T '35.1' 'not assigned.no ontology' 'niben044scf00014469ctg001_1-3139' '(at4g15050 : 176.0) Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G10190.1); Has 633 Blast hits to 604 proteins in 22 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 6; Plants - 620; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66735 : 159.0) no description available & (reliability: 346.0) & (original description: Putative , Description = , PFAM = PF03080;PF14365)' T '35.1' 'not assigned.no ontology' 'niben044scf00014469ctg002_3328-7763' '(at4g15050 : 188.0) Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G10190.1); Has 633 Blast hits to 604 proteins in 22 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 6; Plants - 620; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66735 : 145.0) no description available & (reliability: 374.0) & (original description: Putative , Description = , PFAM = PF03080;PF14365)' T '35.1' 'not assigned.no ontology' 'niben044scf00014677ctg007_1969-7535' '(at5g48545 : 115.0) Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro.; histidine triad nucleotide-binding 3 (HINT3); CONTAINS InterPro DOMAIN/s: Histidine triad-like motif (InterPro:IPR011146), Histidine triad (HIT) protein (InterPro:IPR001310), Histidine triad, conserved site (InterPro:IPR019808), Histidine triad motif (InterPro:IPR011151); BEST Arabidopsis thaliana protein match is: HISTIDINE TRIAD NUCLEOTIDE-BINDING 2 (TAIR:AT1G31160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29590 : 89.9) no description available & (reliability: 230.0) & (original description: Putative HINT3, Description = Histidine triad (Hit) protein, putative, PFAM = PF01230)' T '35.1' 'not assigned.no ontology' 'niben044scf00014787ctg002_1-7597' '(at3g02410 : 542.0) Isoprenylcysteine methylesterase-like 2 (ICME-LIKE2); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Carboxylesterase type B, active site (InterPro:IPR019826), Carboxylesterase, type B (InterPro:IPR002018), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: prenylcysteine methylesterase (TAIR:AT5G15860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31002 : 81.9) no description available & (reliability: 988.0) & (original description: Putative ICMEL2, Description = Probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL2, PFAM = PF00135)' T '35.1' 'not assigned.no ontology' 'niben044scf00014981ctg010_15629-23036' '(at5g15550 : 612.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus, CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), NLE (InterPro:IPR012972), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related (TAIR:AT2G41500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35534 : 447.0) no description available & (gnl|cdd|29257 : 142.0) no description available & (reliability: 1224.0) & (original description: Putative PGSC0003DMG400001452, Description = Ribosome biogenesis protein WDR12 homolog, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF08154)' T '35.1' 'not assigned.no ontology' 'niben044scf00015156ctg000_1-3298' '(at5g03700 : 461.0) D-mannose binding lectin protein with Apple-like carbohydrate-binding domain; FUNCTIONS IN: sugar binding; INVOLVED IN: recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: stem, sperm cell, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-1 domain (InterPro:IPR003014), S-locus glycoprotein (InterPro:IPR000858); BEST Arabidopsis thaliana protein match is: S-domain-2 5 (TAIR:AT4G32300.1); Has 2091 Blast hits to 2063 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17801|kpro_maize : 87.8) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 922.0) & (original description: Putative At5g03700, Description = PAN domain-containing protein At5g03700, PFAM = PF01453;PF00954;PF08276)' T '35.1' 'not assigned.no ontology' 'niben044scf00015353ctg006_2096-10359' '(at5g65290 : 540.0) LMBR1-like membrane protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: LMBR1-like membrane protein, conserved region (InterPro:IPR006876); Has 378 Blast hits to 361 proteins in 164 species: Archae - 0; Bacteria - 1; Metazoa - 119; Fungi - 103; Plants - 62; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|37507 : 389.0) no description available & (reliability: 1080.0) & (original description: Putative Lmbrd2-1, Description = LMBR1 domain-containing protein 2-like A-like protein, PFAM = PF04791)' T '35.1' 'not assigned.no ontology' 'niben044scf00015385ctg007_1-13775' '(at1g29120 : 355.0) Hydrolase-like protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G25770.1). & (gnl|cdd|68625 : 210.0) no description available & (gnl|cdd|39573 : 170.0) no description available & (reliability: 710.0) & (original description: Putative At1g10040, Description = Alpha/beta-hydrolase superfamily protein, PFAM = PF05057)' T '35.1' 'not assigned.no ontology' 'niben044scf00015385ctg008_1943-4800' '(at1g29120 : 179.0) Hydrolase-like protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G25770.1). & (reliability: 358.0) & (original description: Putative At1g29120, Description = Alpha/beta-hydrolase superfamily protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00015569ctg005_4092-7295' '(at3g14260 : 157.0) Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT1G53890.1); Has 295 Blast hits to 292 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86676 : 137.0) no description available & (reliability: 284.0) & (original description: Putative At3g14260, Description = Protein LURP-one-related 11, PFAM = PF04525)' T '35.1' 'not assigned.no ontology' 'niben044scf00015786ctg006_1-6767' '(at1g30540 : 449.0) Actin-like ATPase superfamily protein; CONTAINS InterPro DOMAIN/s: ATPase, BadF/BadG/BcrA/BcrD type (InterPro:IPR002731); Has 1833 Blast hits to 1833 proteins in 714 species: Archae - 64; Bacteria - 1392; Metazoa - 117; Fungi - 35; Plants - 122; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|37005 : 296.0) no description available & (gnl|cdd|85732 : 166.0) no description available & (reliability: 898.0) & (original description: Putative Os07g0147700, Description = Os07g0147700 protein, PFAM = PF01869)' T '35.1' 'not assigned.no ontology' 'niben044scf00015923ctg001_1738-9607' '(at3g44160 : 474.0) Outer membrane OMP85 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: outer membrane; CONTAINS InterPro DOMAIN/s: Bacterial surface antigen (D15) (InterPro:IPR000184); BEST Arabidopsis thaliana protein match is: Outer membrane OMP85 family protein (TAIR:AT3G48620.1); Has 794 Blast hits to 794 proteins in 257 species: Archae - 0; Bacteria - 513; Metazoa - 2; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink). & (reliability: 948.0) & (original description: Putative glysoja_011091, Description = Bet1-like SNARE 1-1, PFAM = PF01103)' T '35.1' 'not assigned.no ontology' 'niben044scf00015957ctg004_1-10480' '(at3g15000 : 239.0) cobalt ion binding; FUNCTIONS IN: cobalt ion binding; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT3G06790.2); Has 57621 Blast hits to 29750 proteins in 1231 species: Archae - 14; Bacteria - 7130; Metazoa - 26978; Fungi - 8402; Plants - 8184; Viruses - 944; Other Eukaryotes - 5969 (source: NCBI BLink). & (q38732|dag_antma : 120.0) DAG protein, chloroplast precursor - Antirrhinum majus (Garden snapdragon) & (reliability: 478.0) & (original description: Putative MORF7, Description = Multiple organellar RNA editing factor 7, mitochondrial, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00016027ctg002_379-4378' '(at3g23980 : 179.0) Encodes a protein that interacts with the Polycomb-group (Pc-G) histone methyltransferase CLF (CURLY LEAF). It colocalizes with CLF to the nucleus and represses a subset of Pc-G target genes. The pleiotropic developmental mutant phenotype suggests that BLI prevents premature differentiation.; BLISTER (BLI); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: flower development, seed development, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 32015 Blast hits to 19612 proteins in 1632 species: Archae - 290; Bacteria - 4748; Metazoa - 14972; Fungi - 3061; Plants - 1469; Viruses - 92; Other Eukaryotes - 7383 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative BLI, Description = BLISTER-like protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00016174ctg013_6562-16167' '(at3g33530 : 756.0) Transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT2G26610.1). & (gnl|cdd|37123 : 340.0) no description available & (reliability: 1512.0) & (original description: Putative pco087232, Description = Bromodomain and WD repeat-containing protein 2, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00016234ctg011_1-14323' '(at1g42470 : 1488.0) Patched family protein; FUNCTIONS IN: hedgehog receptor activity; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Niemann-Pick C type protein (InterPro:IPR004765), Patched (InterPro:IPR003392), Sterol-sensing 5TM box (InterPro:IPR000731); BEST Arabidopsis thaliana protein match is: Patched family protein (TAIR:AT4G38350.1); Has 2676 Blast hits to 2177 proteins in 377 species: Archae - 64; Bacteria - 237; Metazoa - 1621; Fungi - 207; Plants - 110; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (gnl|cdd|37144 : 948.0) no description available & (gnl|cdd|66176 : 180.0) no description available & (reliability: 2976.0) & (original description: Putative At1g42470, Description = Patched family protein, PFAM = PF02460;PF16414)' T '35.1' 'not assigned.no ontology' 'niben044scf00016353ctg001_501-6335' '(at1g29320 : 134.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 10050 Blast hits to 5411 proteins in 439 species: Archae - 25; Bacteria - 1235; Metazoa - 2837; Fungi - 1519; Plants - 647; Viruses - 46; Other Eukaryotes - 3741 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative WDR1, Description = Transducin family protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00016355ctg019_7503-14653' '(at5g40270 : 624.0) HD domain-containing metal-dependent phosphohydrolase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607); BEST Arabidopsis thaliana protein match is: HD domain-containing metal-dependent phosphohydrolase family protein (TAIR:AT5G40290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37892 : 455.0) no description available & (gnl|cdd|31276 : 158.0) no description available & (reliability: 1248.0) & (original description: Putative SAMHD1, Description = HD domain-containing metal-dependent phosphohydrolase family protein isoform 1, PFAM = PF01966)' T '35.1' 'not assigned.no ontology' 'niben044scf00016675ctg002_1-5946' '(at1g74300 : 258.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G74280.1); Has 1098 Blast hits to 1097 proteins in 261 species: Archae - 18; Bacteria - 573; Metazoa - 24; Fungi - 62; Plants - 313; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (reliability: 516.0) & (original description: Putative umc2763, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben044scf00016675ctg002_653-7204' '(at1g74300 : 407.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G74280.1); Has 1098 Blast hits to 1097 proteins in 261 species: Archae - 18; Bacteria - 573; Metazoa - 24; Fungi - 62; Plants - 313; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (reliability: 814.0) & (original description: Putative Os03g0116300, Description = Hydrolase, alpha/beta fold family protein, expressed, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben044scf00016740ctg005_1-1919' '(at1g28280 : 124.0) VQ motif-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT2G33780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative VQ4, Description = VQ motif-containing protein 4, PFAM = PF05678)' T '35.1' 'not assigned.no ontology' 'niben044scf00017309ctg018_10280-18840' '(at5g06370 : 409.0) NC domain-containing protein-related; CONTAINS InterPro DOMAIN/s: NC (InterPro:IPR007053); BEST Arabidopsis thaliana protein match is: NC domain-containing protein-related (TAIR:AT3G02700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 818.0) & (original description: Putative At5g06370, Description = AT5g06370/MHF15_11, PFAM = PF04970)' T '35.1' 'not assigned.no ontology' 'niben044scf00017484ctg001_5814-13054' '(at4g13970 : 1020.0) zinc ion binding; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: SWIM zinc finger family protein (TAIR:AT1G60560.1); Has 80 Blast hits to 80 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 2; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 2040.0) & (original description: Putative At4g13970, Description = Zinc ion binding protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00017503ctg003_1-3926' '(at3g08840 : 118.0) D-alanine--D-alanine ligase family; FUNCTIONS IN: D-alanine-D-alanine ligase activity, catalytic activity, ATP binding; INVOLVED IN: peptidoglycan biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-alanine--D-alanine ligase/VANA/B/C, conserved site (InterPro:IPR000291), D-alanine--D-alanine ligase, C-terminal (InterPro:IPR011095), PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), D-alanine--D-alanine ligase, N-terminal (InterPro:IPR011127); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80932 : 81.7) no description available & (reliability: 236.0) & (original description: Putative At3g08840, Description = D-alanine--D-alanine ligase, PFAM = PF01820)' T '35.1' 'not assigned.no ontology' 'niben044scf00017671ctg003_1-1987' '(at1g48140 : 132.0) dolichol-phosphate mannosyltransferase-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichol-phosphate mannosyltransferase subunit 3 (InterPro:IPR013174). & (gnl|cdd|71718 : 90.7) no description available & (reliability: 264.0) & (original description: Putative At1g48140, Description = Dolichyl-phosphate mannosy synthase 3, PFAM = PF08285)' T '35.1' 'not assigned.no ontology' 'niben044scf00017872ctg015_2005-16975' '(at3g02690 : 415.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); Has 18949 Blast hits to 18894 proteins in 2006 species: Archae - 336; Bacteria - 13590; Metazoa - 17; Fungi - 4; Plants - 207; Viruses - 0; Other Eukaryotes - 4795 (source: NCBI BLink). & (gnl|cdd|83810 : 86.1) no description available & (reliability: 830.0) & (original description: Putative pecM, Description = DMT(Drug/metabolite transporter) superfamily permease, PFAM = PF00892;PF00892)' T '35.1' 'not assigned.no ontology' 'niben044scf00018030ctg005_513-5657' '(at2g32590 : 467.0) LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits to 447 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other Eukaryotes - 108 (source: NCBI BLink). & (gnl|cdd|86950 : 336.0) no description available & (gnl|cdd|37539 : 335.0) no description available & (reliability: 934.0) & (original description: Putative BnaC04g43110D, Description = BnaC04g43110D protein, PFAM = PF05786)' T '35.1' 'not assigned.no ontology' 'niben044scf00018086ctg003_4014-7306' '(at1g21880 : 429.0) lysm domain GPI-anchored protein 1 precursor (LYM1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell wall macromolecule catabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Peptidoglycan-binding Lysin subgroup (InterPro:IPR002482); BEST Arabidopsis thaliana protein match is: Peptidoglycan-binding LysM domain-containing protein (TAIR:AT1G77630.1); Has 660 Blast hits to 639 proteins in 131 species: Archae - 0; Bacteria - 238; Metazoa - 0; Fungi - 1; Plants - 404; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 858.0) & (original description: Putative Os02g0769200, Description = Os02g0769200 protein, PFAM = PF01476;PF01476)' T '35.1' 'not assigned.no ontology' 'niben044scf00018305ctg001_3014-5472' '(at5g17370 : 107.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37906 : 86.3) no description available & (reliability: 214.0) & (original description: Putative BnaC02g07280D, Description = DDB1-and CUL4-associated factor 4, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00018450ctg004_35655-41677' '(at2g03780 : 346.0) Translin family protein; FUNCTIONS IN: sequence-specific DNA binding, DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translin, C-terminal (InterPro:IPR016069), Translin (InterPro:IPR002848), Translin, N-terminal (InterPro:IPR016068); Has 561 Blast hits to 561 proteins in 195 species: Archae - 92; Bacteria - 2; Metazoa - 209; Fungi - 153; Plants - 36; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|38276 : 277.0) no description available & (gnl|cdd|85824 : 182.0) no description available & (reliability: 692.0) & (original description: Putative TRAX, Description = Translin-associated protein X, PFAM = PF01997)' T '35.1' 'not assigned.no ontology' 'niben044scf00018463ctg003_12403-17320' '(at2g26590 : 204.0) regulatory particle non-ATPase 13 (RPN13); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell adhesion; LOCATED IN: integral to membrane, nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 26S proteasome complex ubiquitin receptor, subunit Rpn13 (InterPro:IPR006773); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38247 : 124.0) no description available & (gnl|cdd|68261 : 121.0) no description available & (reliability: 408.0) & (original description: Putative BnaC03g26680D, Description = BnaC03g26680D protein, PFAM = PF16550)' T '35.1' 'not assigned.no ontology' 'niben044scf00018488ctg007_9522-11496' '(at3g08930 : 238.0) LMBR1-like membrane protein; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: LMBR1-like membrane protein, conserved region (InterPro:IPR006876); BEST Arabidopsis thaliana protein match is: LMBR1-like membrane protein (TAIR:AT5G01460.1); Has 384 Blast hits to 384 proteins in 132 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 85; Plants - 80; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|86725 : 116.0) no description available & (reliability: 476.0) & (original description: Putative At3g08930, Description = LMBR1-like membrane protein, PFAM = PF04791)' T '35.1' 'not assigned.no ontology' 'niben044scf00018819ctg004_12632-19158' '(at2g41050 : 204.0) PQ-loop repeat family protein / transmembrane family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cystinosin/ERS1p repeat (InterPro:IPR006603); BEST Arabidopsis thaliana protein match is: PQ-loop repeat family protein / transmembrane family protein (TAIR:AT4G36850.1); Has 930 Blast hits to 673 proteins in 160 species: Archae - 0; Bacteria - 0; Metazoa - 218; Fungi - 545; Plants - 89; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (gnl|cdd|38124 : 101.0) no description available & (reliability: 408.0) & (original description: Putative At2g41050, Description = Putative ovule protein, PFAM = PF04193)' T '35.1' 'not assigned.no ontology' 'niben044scf00018916ctg003_10333-16843' '(at1g80710 : 444.0) Encodes a WD≠40 repeat family protein containing a DWD (DDB1 binding WD≠40) motif. Mutant analysis demonstrates that DRS1 promotes tolerance to drought stress, possibly mediated by ABA, and suggests involvement of DDB1≠ Cul4ñmediated protein degradation in drought response.; DROUGHT SENSITIVE 1 (DRS1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: damaged DNA binding 2 (TAIR:AT5G58760.1); Has 13978 Blast hits to 9952 proteins in 465 species: Archae - 46; Bacteria - 2948; Metazoa - 4636; Fungi - 3015; Plants - 1520; Viruses - 0; Other Eukaryotes - 1813 (source: NCBI BLink). & (gnl|cdd|39529 : 302.0) no description available & (gnl|cdd|29257 : 83.5) no description available & (reliability: 888.0) & (original description: Putative drs1, Description = Drought-sensitive 1 protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00018974ctg011_28616-35365' '(at4g35250 : 638.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G34460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36417 : 274.0) no description available & (gnl|cdd|31046 : 106.0) no description available & (reliability: 1276.0) & (original description: Putative ycf39, Description = Uncharacterized protein ycf39, PFAM = PF05368)' T '35.1' 'not assigned.no ontology' 'niben044scf00019157ctg020_5301-9659' '(at2g14880 : 136.0) SWIB/MDM2 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121), SWIB domain (InterPro:IPR019835); BEST Arabidopsis thaliana protein match is: SWIB/MDM2 domain superfamily protein (TAIR:AT4G34290.1); Has 1208 Blast hits to 1119 proteins in 254 species: Archae - 0; Bacteria - 214; Metazoa - 140; Fungi - 207; Plants - 389; Viruses - 11; Other Eukaryotes - 247 (source: NCBI BLink). & (gnl|cdd|37157 : 109.0) no description available & (gnl|cdd|85905 : 97.2) no description available & (reliability: 272.0) & (original description: Putative PGSC0003DMG400023191, Description = Os12g0507500 protein, PFAM = PF02201)' T '35.1' 'not assigned.no ontology' 'niben044scf00019445ctg003_3149-6636' '(at5g65170 : 81.3) VQ motif-containing protein; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT1G35830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative , Description = , PFAM = PF05678)' T '35.1' 'not assigned.no ontology' 'niben044scf00019595ctg008_1-5997' '(at5g60590 : 255.0) DHBP synthase RibB-like alpha/beta domain; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sua5/YciO/YrdC/YwlC (InterPro:IPR004388), DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945), Sua5/YciO/YrdC, N-terminal (InterPro:IPR006070); BEST Arabidopsis thaliana protein match is: DHBP synthase RibB-like alpha/beta domain (TAIR:AT3G01920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30359 : 114.0) no description available & (reliability: 510.0) & (original description: Putative yrdc, Description = YrdC domain-containing protein, mitochondrial, PFAM = PF01300;PF01300)' T '35.1' 'not assigned.no ontology' 'niben044scf00019785ctg000_6721-9080' '(at4g14240 : 117.0) CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein with a domain of unknown function (DUF21) (TAIR:AT4G14230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37329 : 96.3) no description available & (reliability: 222.0) & (original description: Putative CNNM, Description = DUF21 domain-containing protein, PFAM = PF01595)' T '35.1' 'not assigned.no ontology' 'niben044scf00020036ctg008_9890-13042' '(at3g26510 : 135.0) Octicosapeptide/Phox/Bem1p family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: octicosapeptide/Phox/Bem1p (PB1) domain-containing protein (TAIR:AT1G70640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative At1g04700, Description = Phox/Bem1p, PFAM = PF00564)' T '35.1' 'not assigned.no ontology' 'niben044scf00020174ctg000_16285-24451' '(at5g13020 : 385.0) Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), ENT (InterPro:IPR005491); BEST Arabidopsis thaliana protein match is: Emsy N Terminus (ENT) domain-containing protein (TAIR:AT2G44440.1); Has 417 Blast hits to 397 proteins in 49 species: Archae - 0; Bacteria - 2; Metazoa - 101; Fungi - 4; Plants - 307; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|39874 : 209.0) no description available & (gnl|cdd|67356 : 117.0) no description available & (reliability: 770.0) & (original description: Putative EML3, Description = Protein EMSY-LIKE 3, PFAM = PF03735)' T '35.1' 'not assigned.no ontology' 'niben044scf00020243ctg008_4079-15204' '(at2g30880 : 519.0) Pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: plant-type cell wall; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Pleckstrin homology (InterPro:IPR001849); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1038.0) & (original description: Putative At2g30880, Description = At2g30880/F7F1.9, PFAM = PF00169)' T '35.1' 'not assigned.no ontology' 'niben044scf00020330ctg005_3449-10188' '(at1g59650 : 575.0) Encodes CW14.; CW14; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT1G10410.1); Has 261 Blast hits to 261 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|70520 : 274.0) no description available & (reliability: 1150.0) & (original description: Putative CW14, Description = CW14 protein, PFAM = PF07059)' T '35.1' 'not assigned.no ontology' 'niben044scf00020636ctg009_4365-14151' '(at1g24300 : 382.0) GYF domain-containing protein; CONTAINS InterPro DOMAIN/s: GYF (InterPro:IPR003169); BEST Arabidopsis thaliana protein match is: GYF domain-containing protein (TAIR:AT1G27430.1). & (reliability: 764.0) & (original description: Putative BnaAnng21680D, Description = BnaAnng21680D protein, PFAM = PF02213)' T '35.1' 'not assigned.no ontology' 'niben044scf00020672ctg003_4431-8119' '(at5g42770 : 123.0) Maf-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Maf-like protein (InterPro:IPR003697); BEST Arabidopsis thaliana protein match is: Maf-like protein (TAIR:AT5G66550.1). & (reliability: 246.0) & (original description: Putative Maf3, Description = Maf-like protein, PFAM = PF02545)' T '35.1' 'not assigned.no ontology' 'niben044scf00020685ctg000_1-6057' '(at1g28410 : 140.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT4G31340.2); Has 425 Blast hits to 402 proteins in 77 species: Archae - 4; Bacteria - 22; Metazoa - 249; Fungi - 4; Plants - 98; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative , Description = Putative coiled-coil domain-containing protein 18-like, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00020851ctg000_7612-13964' '(at4g12130 : 490.0) Glycine cleavage T-protein family; FUNCTIONS IN: aminomethyltransferase activity; INVOLVED IN: glycine catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Folate-binding, YgfZ (InterPro:IPR017703), Glycine cleavage T-protein, N-terminal (InterPro:IPR006222), Glycine cleavage T-protein, C-terminal barrel (InterPro:IPR013977); Has 3767 Blast hits to 3765 proteins in 1151 species: Archae - 14; Bacteria - 1914; Metazoa - 108; Fungi - 149; Plants - 51; Viruses - 0; Other Eukaryotes - 1531 (source: NCBI BLink). & (gnl|cdd|38140 : 298.0) no description available & (gnl|cdd|30703 : 156.0) no description available & (reliability: 980.0) & (original description: Putative At4g12130, Description = Putative transferase At4g12130, mitochondrial, PFAM = PF08669)' T '35.1' 'not assigned.no ontology' 'niben044scf00020991ctg005_4413-9447' '(at5g40270 : 606.0) HD domain-containing metal-dependent phosphohydrolase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607); BEST Arabidopsis thaliana protein match is: HD domain-containing metal-dependent phosphohydrolase family protein (TAIR:AT5G40290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37892 : 457.0) no description available & (gnl|cdd|31276 : 139.0) no description available & (reliability: 1212.0) & (original description: Putative At5g40270, Description = AT5g40270/MSN9_170, PFAM = PF01966)' T '35.1' 'not assigned.no ontology' 'niben044scf00021063ctg005_1-2485' '(at3g50440 : 201.0) Encodes a protein shown to have methyl jasmonate esterase activity in vitro. This protein does not act on methyl IAA, MeSA, MeGA4, or MEGA9 in vitro.; methyl esterase 10 (MES10); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 1 (TAIR:AT2G23620.1); Has 1602 Blast hits to 1600 proteins in 360 species: Archae - 4; Bacteria - 838; Metazoa - 1; Fungi - 25; Plants - 612; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (q40708|pir7a_orysa : 127.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 402.0) & (original description: Putative MES20, Description = Putative inactive methylesterase 20, PFAM = PF00561)' T '35.1' 'not assigned.no ontology' 'niben044scf00021405ctg004_115-6534' '(at5g21090 : 308.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G43740.1); Has 79109 Blast hits to 18390 proteins in 732 species: Archae - 33; Bacteria - 1866; Metazoa - 5774; Fungi - 472; Plants - 66918; Viruses - 0; Other Eukaryotes - 4046 (source: NCBI BLink). & (p93194|rpk1_iponi : 95.9) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 616.0) & (original description: Putative LRP, Description = LRR protein, PFAM = PF13855;PF00560;PF08263)' T '35.1' 'not assigned.no ontology' 'niben044scf00022345ctg032_1-3717' '(at1g33980 : 168.0) Involved in mRNA surveillance, detects exported mRNAs with truncated open reading frames and initiates nonsense-mediated mRNA decay (NMD); UPF3; FUNCTIONS IN: nucleotide binding; INVOLVED IN: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Regulator of nonsense-mediated decay, UPF3 (InterPro:IPR005120); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67104 : 113.0) no description available & (reliability: 336.0) & (original description: Putative UPF3, Description = Smg-4/UPF3 family protein, PFAM = PF03467)' T '35.1' 'not assigned.no ontology' 'niben044scf00022356ctg019_1928-13001' '(at5g48960 : 586.0) HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase; FUNCTIONS IN: 5'-nucleotidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase (InterPro:IPR008380); BEST Arabidopsis thaliana protein match is: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase (TAIR:AT1G75210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37680 : 318.0) no description available & (gnl|cdd|86943 : 246.0) no description available & (reliability: 1172.0) & (original description: Putative surE2, Description = HAD superfamily (Subfamily IG) hydrolase, 5'-nucleotidase, PFAM = PF05761)' T '35.1' 'not assigned.no ontology' 'niben044scf00022406ctg025_30324-34755' '(at2g33550 : 280.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT4G31270.1); Has 743 Blast hits to 735 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 8; Plants - 568; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative ASR3, Description = Trihelix transcription factor ASR3, PFAM = PF13837)' T '35.1' 'not assigned.no ontology' 'niben044scf00022676ctg000_1587-11689' '(at3g56120 : 496.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Met10 (InterPro:IPR003402); BEST Arabidopsis thaliana protein match is: Met-10+ like family protein (TAIR:AT4G27340.1); Has 1391 Blast hits to 1232 proteins in 427 species: Archae - 416; Bacteria - 202; Metazoa - 266; Fungi - 150; Plants - 114; Viruses - 0; Other Eukaryotes - 243 (source: NCBI BLink). & (gnl|cdd|37289 : 310.0) no description available & (gnl|cdd|66190 : 203.0) no description available & (reliability: 992.0) & (original description: Putative TRM5, Description = tRNA (guanine(37)-N1)-methyltransferase, PFAM = PF02475)' T '35.1' 'not assigned.no ontology' 'niben044scf00022878ctg023_20793-28296' '(at5g50530 : 583.0) CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein (TAIR:AT5G50640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73087 : 156.0) no description available & (reliability: 1166.0) & (original description: Putative CBSCBSPB4, Description = CBS domain-containing protein CBSCBSPB4, PFAM = PF00571;PF00571;PF00571;PF00571;PF00564)' T '35.1' 'not assigned.no ontology' 'niben044scf00022892ctg007_1-4927' '(at4g11790 : 115.0) Pleckstrin homology (PH) domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein 1 (InterPro:IPR000156), Pleckstrin homology-type (InterPro:IPR011993); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative At4g11790, Description = AT4g11790/T5C23_220, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00022943ctg005_1327-6772' '(at5g23130 : 220.0) Peptidoglycan-binding LysM domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell wall macromolecule catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Peptidoglycan-binding Lysin subgroup (InterPro:IPR002482); BEST Arabidopsis thaliana protein match is: peptidoglycan-binding LysM domain-containing protein (TAIR:AT5G08200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'niben044scf00022967ctg003_1-1683' '(at5g19820 : 182.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37382 : 151.0) no description available & (reliability: 364.0) & (original description: Putative emb2734, Description = Importin-5, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00023080ctg001_231-4661' '(at3g14750 : 139.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67170.1); Has 4036 Blast hits to 3091 proteins in 519 species: Archae - 61; Bacteria - 669; Metazoa - 1503; Fungi - 255; Plants - 421; Viruses - 4; Other Eukaryotes - 1123 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative SMC, Description = Structural maintenance of chromosomes domain-containing protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00023132ctg001_47-3011' '(gnl|cdd|28751 : 221.0) no description available & (at4g39730 : 209.0) Lipase/lipooxygenase, PLAT/LH2 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976); BEST Arabidopsis thaliana protein match is: Lipase/lipooxygenase, PLAT/LH2 family protein (TAIR:AT2G22170.1); Has 247 Blast hits to 225 proteins in 46 species: Archae - 0; Bacteria - 3; Metazoa - 94; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 418.0) & (original description: Putative TinI, Description = TMV-induced protein I, PFAM = PF01477)' T '35.1' 'not assigned.no ontology' 'niben044scf00023219ctg000_10203-16955' '(at4g36530 : 497.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G19850.1); Has 21771 Blast hits to 21766 proteins in 2265 species: Archae - 246; Bacteria - 15770; Metazoa - 624; Fungi - 315; Plants - 912; Viruses - 5; Other Eukaryotes - 3899 (source: NCBI BLink). & (gnl|cdd|36667 : 182.0) no description available & (gnl|cdd|30941 : 116.0) no description available & (reliability: 994.0) & (original description: Putative mhpC, Description = Alpha/beta superfamily hydrolase, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben044scf00023642ctg000_38449-48445' '(at1g20970 : 271.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: guard cell, cultured cell; BEST Arabidopsis thaliana protein match is: proton pump interactor 1 (TAIR:AT4G27500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 542.0) & (original description: Putative At1g20970, Description = BnaA06g14790D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00023881ctg000_24473-30031' '(at3g15000 : 227.0) cobalt ion binding; FUNCTIONS IN: cobalt ion binding; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT3G06790.2); Has 57621 Blast hits to 29750 proteins in 1231 species: Archae - 14; Bacteria - 7130; Metazoa - 26978; Fungi - 8402; Plants - 8184; Viruses - 944; Other Eukaryotes - 5969 (source: NCBI BLink). & (q38732|dag_antma : 117.0) DAG protein, chloroplast precursor - Antirrhinum majus (Garden snapdragon) & (reliability: 454.0) & (original description: Putative DAG, Description = Plastid developmental protein DAG, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00024250ctg012_499-4757' '(gnl|cdd|69288 : 266.0) no description available & (at3g05500 : 219.0) Rubber elongation factor protein (REF); INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rubber elongation factor (InterPro:IPR008802); BEST Arabidopsis thaliana protein match is: Rubber elongation factor protein (REF) (TAIR:AT2G47780.1); Has 129 Blast hits to 129 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q9fra7|y5940_orysa : 167.0) Putative REF/SRPP-like protein Os05g0151300 - Oryza sativa (Rice) & (reliability: 438.0) & (original description: Putative At3g05500, Description = REF/SRPP-like protein At3g05500, PFAM = PF05755)' T '35.1' 'not assigned.no ontology' 'niben044scf00024618ctg003_9733-15154' '(at1g79740 : 953.0) hAT transposon superfamily; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 899 Blast hits to 801 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 5; Plants - 875; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|68508 : 183.0) no description available & (reliability: 1906.0) & (original description: Putative Os01g0222700, Description = Os01g0222700 protein, PFAM = PF04937;PF02892;PF05699)' T '35.1' 'not assigned.no ontology' 'niben044scf00024666ctg004_7542-18136' '(at5g12220 : 301.0) las1-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Las1-like (InterPro:IPR007174). & (gnl|cdd|37636 : 211.0) no description available & (gnl|cdd|67640 : 156.0) no description available & (reliability: 602.0) & (original description: Putative , Description = Putative pre-rRNA-processing protein las1-like, PFAM = PF04031)' T '35.1' 'not assigned.no ontology' 'niben044scf00024824ctg008_1-7862' '(at5g05570 : 476.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: methyltransferase activity, nucleotide binding, nucleic acid binding; INVOLVED IN: vesicle-mediated transport, methylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), WD40 repeat, subgroup (InterPro:IPR019781), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G35560.2). & (gnl|cdd|37194 : 87.4) no description available & (reliability: 952.0) & (original description: Putative PGSC0003DMG402008471, Description = Transducin family protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00024957ctg007_2271-5179' '(at3g02700 : 160.0) NC domain-containing protein-related; CONTAINS InterPro DOMAIN/s: NC (InterPro:IPR007053); BEST Arabidopsis thaliana protein match is: NC domain-containing protein-related (TAIR:AT5G16360.1); Has 186 Blast hits to 185 proteins in 40 species: Archae - 0; Bacteria - 31; Metazoa - 10; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative At5g06370, Description = Lecithin retinol acyltransferase, PFAM = PF04970)' T '35.1' 'not assigned.no ontology' 'niben044scf00025001ctg006_1-4678' '(at5g64440 : 216.0) AtFAAH (fatty acid amide hydrolase) modulates endogenous NAEs (N-Acylethanolamines) levels in plants by hydrolyzing NAEs to ethanolamine and their corresponding free fatty acids. NAE depletion likely participates in the regulation of plant growth.; fatty acid amide hydrolase (FAAH); FUNCTIONS IN: N-(long-chain-acyl)ethanolamine deacylase activity, amidase activity; INVOLVED IN: defense response to bacterium; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT3G25660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative FAAH, Description = Fatty acid amide hydrolase, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00025192ctg001_4552-10704' '(at1g59600 : 324.0) ZCW7; Has 136 Blast hits to 136 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 648.0) & (original description: Putative , Description = ZCW7, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00025311ctg004_4223-19751' '(at5g58000 : 272.0) Reticulon family protein; LOCATED IN: endoplasmic reticulum, chloroplast; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT2G20590.1); Has 1128 Blast hits to 1113 proteins in 146 species: Archae - 0; Bacteria - 2; Metazoa - 759; Fungi - 49; Plants - 88; Viruses - 4; Other Eukaryotes - 226 (source: NCBI BLink). & (reliability: 544.0) & (original description: Putative PGSC0003DMG400007900, Description = Reticulon-like protein, PFAM = PF02453)' T '35.1' 'not assigned.no ontology' 'niben044scf00025352ctg007_1-2876' '(at5g12040 : 204.0) Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein; FUNCTIONS IN: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, zinc ion binding; INVOLVED IN: nitrogen compound metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010); BEST Arabidopsis thaliana protein match is: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein (TAIR:AT4G08790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36024 : 112.0) no description available & (gnl|cdd|30737 : 80.6) no description available & (reliability: 408.0) & (original description: Putative nit2, Description = Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein, PFAM = PF00795)' T '35.1' 'not assigned.no ontology' 'niben044scf00025657ctg000_1-12346' '(at2g25320 : 2261.0) TRAF-like family protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT2G25330.1); Has 73652 Blast hits to 40883 proteins in 2342 species: Archae - 900; Bacteria - 9328; Metazoa - 35691; Fungi - 5783; Plants - 4303; Viruses - 204; Other Eukaryotes - 17443 (source: NCBI BLink). & (gnl|cdd|37198 : 123.0) no description available & (gnl|cdd|58100 : 97.5) no description available & (reliability: 4522.0) & (original description: Putative CMS1, Description = CGS1 mRNA stability 1, PFAM = PF00917;PF00917)' T '35.1' 'not assigned.no ontology' 'niben044scf00025787ctg007_1458-4944' '(at5g06570 : 330.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 17 (TAIR:AT5G16080.1); Has 10656 Blast hits to 10638 proteins in 1662 species: Archae - 116; Bacteria - 6264; Metazoa - 727; Fungi - 1011; Plants - 1362; Viruses - 3; Other Eukaryotes - 1173 (source: NCBI BLink). & (gnl|cdd|36728 : 281.0) no description available & (gnl|cdd|87389 : 208.0) no description available & (q6l545|gid1_orysa : 152.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 660.0) & (original description: Putative CXE15, Description = Probable carboxylesterase 15, PFAM = PF07859)' T '35.1' 'not assigned.no ontology' 'niben044scf00025840ctg009_1-5548' '(at1g03760 : 84.3) Prefoldin chaperone subunit family protein; FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Prefoldin alpha-like (InterPro:IPR004127), Prefoldin (InterPro:IPR009053); Has 429 Blast hits to 422 proteins in 142 species: Archae - 27; Bacteria - 8; Metazoa - 215; Fungi - 17; Plants - 37; Viruses - 4; Other Eukaryotes - 121 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative At1g03760, Description = Prefoldin, PFAM = PF02996)' T '35.1' 'not assigned.no ontology' 'niben044scf00025921ctg011_128-4505' '(at1g68080 : 213.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative At1g68080, Description = Prolyl 3-hydroxylase 1, PFAM = PF13640)' T '35.1' 'not assigned.no ontology' 'niben044scf00025990ctg000_3014-6115' '(at3g26510 : 141.0) Octicosapeptide/Phox/Bem1p family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: octicosapeptide/Phox/Bem1p (PB1) domain-containing protein (TAIR:AT1G70640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative ZOSMA_63G00310, Description = Octicosapeptide/Phox/Bem1p domain-containing protein kinase, PFAM = PF00564)' T '35.1' 'not assigned.no ontology' 'niben044scf00026238ctg017_1-8567' '(at1g05280 : 452.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT4G15240.1); Has 523 Blast hits to 513 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 61; Fungi - 172; Plants - 273; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|68226 : 333.0) no description available & (gnl|cdd|37457 : 237.0) no description available & (reliability: 904.0) & (original description: Putative BnaA10g03350D, Description = BnaA10g03350D protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben044scf00026343ctg004_7444-10662' '(at4g00170 : 196.0) Plant VAMP (vesicle-associated membrane protein) family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: vesicle associated protein (TAIR:AT3G60600.1); Has 1100 Blast hits to 1071 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 430; Fungi - 141; Plants - 437; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (gnl|cdd|35660 : 108.0) no description available & (gnl|cdd|84916 : 89.3) no description available & (reliability: 392.0) & (original description: Putative BnaC03g32160D, Description = BnaC03g32160D protein, PFAM = PF00635;PF00635)' T '35.1' 'not assigned.no ontology' 'niben044scf00026646ctg004_9502-16916' '(at3g05940 : 498.0) Protein of unknown function (DUF300); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT5G26740.3); Has 926 Blast hits to 920 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 354; Fungi - 191; Plants - 245; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (gnl|cdd|37852 : 301.0) no description available & (gnl|cdd|67249 : 292.0) no description available & (reliability: 908.0) & (original description: Putative At5g26734, Description = AT5G26740 protein, PFAM = PF03619)' T '35.1' 'not assigned.no ontology' 'niben044scf00026651ctg004_3412-8150' '(at1g13820 : 339.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G39220.1); Has 7432 Blast hits to 7419 proteins in 1219 species: Archae - 99; Bacteria - 5035; Metazoa - 262; Fungi - 72; Plants - 574; Viruses - 0; Other Eukaryotes - 1390 (source: NCBI BLink). & (gnl|cdd|36667 : 156.0) no description available & (reliability: 678.0) & (original description: Putative TIDP3447, Description = Putative hydrolase yugF, PFAM = PF00561;PF12146)' T '35.1' 'not assigned.no ontology' 'niben044scf00026762ctg002_5580-12091' '(at2g46380 : 312.0) Protein of unknown function (DUF3133); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3133 (InterPro:IPR021480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3133) (TAIR:AT3G61670.1); Has 300 Blast hits to 240 proteins in 20 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 624.0) & (original description: Putative BnaA05g01430D, Description = Extra-large G-like protein, PFAM = PF11331)' T '35.1' 'not assigned.no ontology' 'niben044scf00026782ctg010_8869-11041' '(at4g31930 : 136.0) Mitochondrial glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: Mitochondrial glycoprotein family protein (TAIR:AT1G80720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37747 : 89.7) no description available & (reliability: 272.0) & (original description: Putative BnaC01g06490D, Description = BnaC01g06490D protein, PFAM = PF02330)' T '35.1' 'not assigned.no ontology' 'niben044scf00026857ctg003_45272-51837' '(gnl|cdd|72813 : 239.0) no description available & (at3g05270 : 204.0) Plant protein of unknown function (DUF869); EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G21810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36212 : 80.6) no description available & (reliability: 408.0) & (original description: Putative FPP, Description = Filament-like plant protein, PFAM = PF05911;PF05911;PF05911;PF05911)' T '35.1' 'not assigned.no ontology' 'niben044scf00026983ctg002_11847-19903' '(at3g07170 : 140.0) Sterile alpha motif (SAM) domain-containing protein; CONTAINS InterPro DOMAIN/s: Sterile alpha motif (InterPro:IPR001660), Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 1 (InterPro:IPR021129); BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT5G48680.1); Has 516 Blast hits to 515 proteins in 77 species: Archae - 0; Bacteria - 10; Metazoa - 341; Fungi - 2; Plants - 148; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|39575 : 102.0) no description available & (reliability: 280.0) & (original description: Putative TCM_002879, Description = Sterile alpha motif domain-containing protein isoform 1, PFAM = PF00536)' T '35.1' 'not assigned.no ontology' 'niben044scf00027469ctg003_1-2202' '(at5g24350 : 361.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39 (InterPro:IPR013244). & (reliability: 722.0) & (original description: Putative MIP2, Description = BnaA06g26880D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00027552ctg000_6160-11714' '(at5g60210 : 259.0) ROP interactive partner 5 (RIP5); BEST Arabidopsis thaliana protein match is: ROP interactive partner 3 (TAIR:AT2G37080.1). & (reliability: 518.0) & (original description: Putative ICR3, Description = Interactor of constitutive active ROPs 3, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00027676ctg000_330-4007' '(at2g44420 : 192.0) protein N-terminal asparagine amidohydrolase family protein; Has 155 Blast hits to 154 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative At2g44420, Description = Protein N-terminal asparagine amidohydrolase, PFAM = PF14736)' T '35.1' 'not assigned.no ontology' 'niben044scf00027686ctg005_2054-12129' '(at5g48370 : 339.0) Thioesterase/thiol ester dehydrase-isomerase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase/thiol ester dehydrase-isomerase superfamily protein (TAIR:AT2G30720.1); Has 2835 Blast hits to 2174 proteins in 781 species: Archae - 49; Bacteria - 1954; Metazoa - 460; Fungi - 99; Plants - 81; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (gnl|cdd|37974 : 204.0) no description available & (gnl|cdd|48037 : 106.0) no description available & (reliability: 678.0) & (original description: Putative At5g48370, Description = Acyl-CoA thioester hydrolase-like, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00027726ctg001_4387-16795' '(at5g11240 : 551.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Small-subunit processome, Utp12 (InterPro:IPR007148), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 8385 Blast hits to 5100 proteins in 391 species: Archae - 41; Bacteria - 3255; Metazoa - 1724; Fungi - 1723; Plants - 553; Viruses - 0; Other Eukaryotes - 1089 (source: NCBI BLink). & (gnl|cdd|39747 : 283.0) no description available & (gnl|cdd|29257 : 88.9) no description available & (reliability: 1102.0) & (original description: Putative BnaA02g00910D, Description = BnaA02g00910D protein, PFAM = PF00400;PF00400;PF04003)' T '35.1' 'not assigned.no ontology' 'niben044scf00027790ctg005_531-7100' '(at5g60590 : 262.0) DHBP synthase RibB-like alpha/beta domain; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sua5/YciO/YrdC/YwlC (InterPro:IPR004388), DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945), Sua5/YciO/YrdC, N-terminal (InterPro:IPR006070); BEST Arabidopsis thaliana protein match is: DHBP synthase RibB-like alpha/beta domain (TAIR:AT3G01920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30359 : 114.0) no description available & (gnl|cdd|38261 : 85.1) no description available & (reliability: 524.0) & (original description: Putative Yrdc, Description = YrdC domain-containing protein, mitochondrial, PFAM = PF01300)' T '35.1' 'not assigned.no ontology' 'niben044scf00028155ctg006_694-5506' '(at5g64440 : 345.0) AtFAAH (fatty acid amide hydrolase) modulates endogenous NAEs (N-Acylethanolamines) levels in plants by hydrolyzing NAEs to ethanolamine and their corresponding free fatty acids. NAE depletion likely participates in the regulation of plant growth.; fatty acid amide hydrolase (FAAH); FUNCTIONS IN: N-(long-chain-acyl)ethanolamine deacylase activity, amidase activity; INVOLVED IN: defense response to bacterium; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT3G25660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36425 : 222.0) no description available & (gnl|cdd|30503 : 191.0) no description available & (reliability: 690.0) & (original description: Putative gatA, Description = Fatty acid amide hydrolase, PFAM = PF01425)' T '35.1' 'not assigned.no ontology' 'niben044scf00028315ctg009_8112-14205' '(at2g22650 : 425.0) FAD-dependent oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 850.0) & (original description: Putative At2g22650, Description = FAD-dependent oxidoreductase-like protein, PFAM = PF01266)' T '35.1' 'not assigned.no ontology' 'niben044scf00028559ctg001_1081-4776' '(at5g10910 : 161.0) mraW methylase family protein; FUNCTIONS IN: methyltransferase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosyl-L-methionine-dependent methyltransferase, MraW (InterPro:IPR002903); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37993 : 154.0) no description available & (gnl|cdd|30623 : 129.0) no description available & (reliability: 322.0) & (original description: Putative rsmH, Description = Ribosomal RNA small subunit methyltransferase H, PFAM = PF01795)' T '35.1' 'not assigned.no ontology' 'niben044scf00028772ctg003_35648-40337' '(at2g23360 : 366.0) Plant protein of unknown function (DUF869); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G19835.2); Has 38218 Blast hits to 24021 proteins in 1620 species: Archae - 547; Bacteria - 4231; Metazoa - 19834; Fungi - 3463; Plants - 2306; Viruses - 121; Other Eukaryotes - 7716 (source: NCBI BLink). & (gnl|cdd|72813 : 208.0) no description available & (reliability: 732.0) & (original description: Putative PGSC0003DMG400004007, Description = Predicted protein, PFAM = PF05911)' T '35.1' 'not assigned.no ontology' 'niben044scf00029249ctg005_1-3826' '(at4g39970 : 297.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT3G48420.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 594.0) & (original description: Putative TCM_001078, Description = Haloacid dehalogenase-like hydrolase superfamily protein isoform 2, PFAM = PF13419)' T '35.1' 'not assigned.no ontology' 'niben044scf00029391ctg001_1-11147' '(at2g39340 : 419.0) SAC3/GANP/Nin1/mts3/eIF-3 p25 family; CONTAINS InterPro DOMAIN/s: SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37072 : 189.0) no description available & (reliability: 838.0) & (original description: Putative leng8, Description = Leukocyte receptor cluster member 8, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00029513ctg001_7314-15884' '(at1g15740 : 496.0) Leucine-rich repeat family protein; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G23840.1); Has 38052 Blast hits to 19856 proteins in 856 species: Archae - 6; Bacteria - 8624; Metazoa - 11681; Fungi - 680; Plants - 12072; Viruses - 79; Other Eukaryotes - 4910 (source: NCBI BLink). & (reliability: 992.0) & (original description: Putative glysoja_031857, Description = F-box/LRR-repeat protein 14, PFAM = PF13855;PF13516;PF13516;PF13516)' T '35.1' 'not assigned.no ontology' 'niben044scf00029619ctg002_5678-9260' '(at5g22460 : 207.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, vacuole, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G36290.1); Has 868 Blast hits to 866 proteins in 213 species: Archae - 4; Bacteria - 450; Metazoa - 1; Fungi - 48; Plants - 316; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative umc2763, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00029791ctg005_1-3672' '(at2g07360 : 232.0) SH3 domain-containing protein; FUNCTIONS IN: binding; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Src homology-3 domain (InterPro:IPR001452), Armadillo-type fold (InterPro:IPR016024). & (reliability: 464.0) & (original description: Putative At2g07370, Description = Putative uncharacterized protein At2g07370, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00030404ctg001_14916-22223' '(at1g04280 : 464.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cell killing; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Zeta toxin (InterPro:IPR010488); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G06750.2); Has 195 Blast hits to 194 proteins in 47 species: Archae - 0; Bacteria - 42; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 3; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 894.0) & (original description: Putative BnaC08g00590D, Description = BnaC08g00590D protein, PFAM = PF06414)' T '35.1' 'not assigned.no ontology' 'niben044scf00030711ctg002_1-4562' '(at3g03610 : 108.0) ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT1G03620.1); Has 825 Blast hits to 825 proteins in 140 species: Archae - 0; Bacteria - 0; Metazoa - 481; Fungi - 44; Plants - 173; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'niben044scf00030743ctg001_1-3500' '(at5g62740 : 512.0) HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1 (HIR1); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT1G69840.7); Has 5648 Blast hits to 5647 proteins in 1784 species: Archae - 171; Bacteria - 3783; Metazoa - 267; Fungi - 306; Plants - 270; Viruses - 3; Other Eukaryotes - 848 (source: NCBI BLink). & (gnl|cdd|37831 : 385.0) no description available & (gnl|cdd|48219 : 361.0) no description available & (reliability: 1024.0) & (original description: Putative HIR1, Description = Hypersensitive-induced response protein 1, PFAM = PF01145)' T '35.1' 'not assigned.no ontology' 'niben044scf00031114ctg000_13233-21448' '(at1g04910 : 818.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G22460.1); Has 861 Blast hits to 824 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 861; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 379.0) no description available & (reliability: 1636.0) & (original description: Putative At1g04910, Description = Uncharacterized protein At1g04910, PFAM = PF10250)' T '35.1' 'not assigned.no ontology' 'niben044scf00031211ctg014_3615-12198' '(at3g45740 : 473.0) hydrolase family protein / HAD-superfamily protein; FUNCTIONS IN: copper ion binding, zinc ion binding; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIA, CECR5 (InterPro:IPR006353), HAD-superfamily hydrolase, subfamily IIA (InterPro:IPR006357); Has 548 Blast hits to 526 proteins in 159 species: Archae - 8; Bacteria - 6; Metazoa - 128; Fungi - 307; Plants - 36; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|36831 : 328.0) no description available & (reliability: 946.0) & (original description: Putative Sb01g038800, Description = Putative uncharacterized protein Sb01g038800, PFAM = PF13344;PF13242)' T '35.1' 'not assigned.no ontology' 'niben044scf00031846ctg009_1-8750' '(at4g34280 : 462.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: U2A'/phosphoprotein 32 family A, C-terminal (InterPro:IPR003603), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G61210.2); Has 5718 Blast hits to 4596 proteins in 341 species: Archae - 5; Bacteria - 811; Metazoa - 2365; Fungi - 1046; Plants - 644; Viruses - 0; Other Eukaryotes - 847 (source: NCBI BLink). & (gnl|cdd|35485 : 88.8) no description available & (reliability: 924.0) & (original description: Putative POPTR_0001s30490g, Description = Transducin family protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00031896ctg005_423-6071' '(at1g51450 : 275.0) Nuclear protein required for early embryogenesis.; TRAUCO (TRO); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: histone methylation, embryo development; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SPla/RYanodine receptor subgroup (InterPro:IPR018355), B302 (SPRY)-like (InterPro:IPR001870), SPla/RYanodine receptor SPRY (InterPro:IPR003877); Has 2366 Blast hits to 2103 proteins in 282 species: Archae - 12; Bacteria - 162; Metazoa - 1213; Fungi - 403; Plants - 173; Viruses - 13; Other Eukaryotes - 390 (source: NCBI BLink). & (gnl|cdd|37837 : 191.0) no description available & (reliability: 550.0) & (original description: Putative ASH2, Description = Set1/Ash2 histone methyltransferase complex subunit ASH2, PFAM = PF00622)' T '35.1' 'not assigned.no ontology' 'niben044scf00032117ctg008_3300-7470' '(at3g51660 : 146.0) Tautomerase/MIF superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: inflammatory response, response to other organism; LOCATED IN: peroxisome; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tautomerase (InterPro:IPR014347), Macrophage migration inhibitory factor (InterPro:IPR001398); BEST Arabidopsis thaliana protein match is: Tautomerase/MIF superfamily protein (TAIR:AT5G01650.1); Has 396 Blast hits to 396 proteins in 86 species: Archae - 0; Bacteria - 25; Metazoa - 165; Fungi - 0; Plants - 140; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|36970 : 110.0) no description available & (reliability: 292.0) & (original description: Putative At5g01650, Description = Macrophage migration inhibitory factor family protein, PFAM = PF01187)' T '35.1' 'not assigned.no ontology' 'niben044scf00032320ctg003_1228-7713' '(at2g41050 : 137.0) PQ-loop repeat family protein / transmembrane family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cystinosin/ERS1p repeat (InterPro:IPR006603); BEST Arabidopsis thaliana protein match is: PQ-loop repeat family protein / transmembrane family protein (TAIR:AT4G36850.1); Has 930 Blast hits to 673 proteins in 160 species: Archae - 0; Bacteria - 0; Metazoa - 218; Fungi - 545; Plants - 89; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (gnl|cdd|38124 : 92.7) no description available & (reliability: 274.0) & (original description: Putative MtrDRAFT_AC149134g6v2, Description = Cystinosin/ERS1p repeat, PFAM = PF04193)' T '35.1' 'not assigned.no ontology' 'niben044scf00032501ctg003_5672-7589' '(at3g11600 : 84.3) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative T19F11.1, Description = Putative uncharacterized protein At3g11600, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00033002ctg003_1-4674' '(at4g34270 : 326.0) TIP41-like family protein; CONTAINS InterPro DOMAIN/s: TIP41-like protein (InterPro:IPR007303); Has 348 Blast hits to 346 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 123; Fungi - 127; Plants - 55; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|38434 : 240.0) no description available & (gnl|cdd|67776 : 206.0) no description available & (reliability: 652.0) & (original description: Putative At4g34270, Description = Putative uncharacterized protein At4g34270, PFAM = PF04176)' T '35.1' 'not assigned.no ontology' 'niben044scf00033135ctg000_1-12540' '(at2g43235 : 131.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 41 Blast hits to 41 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative PGSC0003DMG400021613, Description = , PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00033577ctg001_1-5239' '(at3g19230 : 552.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G05990.1); Has 60731 Blast hits to 14722 proteins in 650 species: Archae - 18; Bacteria - 1872; Metazoa - 1598; Fungi - 177; Plants - 54234; Viruses - 0; Other Eukaryotes - 2832 (source: NCBI BLink). & (q8lkz1|nork_pea : 114.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 1104.0) & (original description: Putative At3g19230, Description = Leucine-rich repeat-containing protein, PFAM = PF12819;PF00560;PF08263)' T '35.1' 'not assigned.no ontology' 'niben044scf00033600ctg003_1-3359' '(at3g14172 : 244.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G72410.1). & (reliability: 488.0) & (original description: Putative At3g14172, Description = BnaA03g33240D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00033611ctg001_243-5367' '(at3g53850 : 175.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT5G02060.1); Has 207 Blast hits to 207 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative At3g53850, Description = CASP-like protein 5B2, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben044scf00033646ctg001_735-3313' '(at5g47540 : 150.0) Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT4G17270.1); Has 570 Blast hits to 568 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 142; Plants - 154; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|36779 : 105.0) no description available & (reliability: 286.0) & (original description: Putative dl4670w, Description = Putative MO25-like protein At4g17270, PFAM = PF08569)' T '35.1' 'not assigned.no ontology' 'niben044scf00033732ctg002_1282-7997' '(at5g40570 : 145.0) Surfeit locus protein 2 (SURF2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Surfeit locus 2 (InterPro:IPR008833); BEST Arabidopsis thaliana protein match is: Surfeit locus protein 2 (SURF2) (TAIR:AT5G14440.1); Has 83 Blast hits to 79 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 37; Fungi - 2; Plants - 33; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|69025 : 95.2) no description available & (reliability: 290.0) & (original description: Putative TCM_016999, Description = Surfeit locus protein 2, putative isoform 1, PFAM = PF05477)' T '35.1' 'not assigned.no ontology' 'niben044scf00034174ctg001_1-4303' '(at5g47540 : 228.0) Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT4G17270.1); Has 570 Blast hits to 568 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 142; Plants - 154; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|36779 : 204.0) no description available & (gnl|cdd|87570 : 187.0) no description available & (reliability: 446.0) & (original description: Putative MO25, Description = Protein Mo25, PFAM = PF08569)' T '35.1' 'not assigned.no ontology' 'niben044scf00034338ctg007_718-5591' '(at2g04690 : 246.0) Pyridoxamine 5'-phosphate oxidase family protein; FUNCTIONS IN: FMN binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellular repressor of E1A-stimulated genes (CREG) (InterPro:IPR014631), FMN-binding split barrel (InterPro:IPR012349), FMN-binding split barrel, related (InterPro:IPR009002); Has 408 Blast hits to 408 proteins in 115 species: Archae - 0; Bacteria - 83; Metazoa - 160; Fungi - 2; Plants - 80; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (gnl|cdd|38584 : 201.0) no description available & (reliability: 492.0) & (original description: Putative At2g04690, Description = At2g04690/F28I8.27, PFAM = PF13883)' T '35.1' 'not assigned.no ontology' 'niben044scf00034361ctg001_8288-14169' '(at1g12390 : 160.0) Cornichon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular signaling pathway; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Cornichon (InterPro:IPR003377); BEST Arabidopsis thaliana protein match is: Cornichon family protein (TAIR:AT1G12340.1); Has 617 Blast hits to 617 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 324; Fungi - 159; Plants - 93; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|37940 : 130.0) no description available & (gnl|cdd|66954 : 91.0) no description available & (reliability: 320.0) & (original description: Putative At1g12390, Description = Protein cornichon homolog 4, PFAM = PF03311)' T '35.1' 'not assigned.no ontology' 'niben044scf00034638ctg001_179-12351' '(at5g42950 : 620.0) GYF domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GYF (InterPro:IPR003169); BEST Arabidopsis thaliana protein match is: GYF domain-containing protein (TAIR:AT1G24300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37073 : 84.8) no description available & (reliability: 1240.0) & (original description: Putative BnaAnng21680D, Description = BnaAnng21680D protein, PFAM = PF02213)' T '35.1' 'not assigned.no ontology' 'niben044scf00035227ctg001_2436-6256' '(at1g52200 : 206.0) PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT3G18450.1); Has 632 Blast hits to 631 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 75; Plants - 516; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86720 : 105.0) no description available & (reliability: 412.0) & (original description: Putative PCR8, Description = Protein PLANT CADMIUM RESISTANCE 8, PFAM = PF04749)' T '35.1' 'not assigned.no ontology' 'niben044scf00035682ctg008_9616-21569' '(at5g42950 : 919.0) GYF domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GYF (InterPro:IPR003169); BEST Arabidopsis thaliana protein match is: GYF domain-containing protein (TAIR:AT1G24300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37073 : 86.7) no description available & (reliability: 1838.0) & (original description: Putative BnaAnng21680D, Description = Putative ovule protein, PFAM = PF02213)' T '35.1' 'not assigned.no ontology' 'niben044scf00035741ctg005_3778-9982' '(at5g65280 : 562.0) Encodes a protein with reported similarity to GCR2 a putative G protein coupled receptor thought to be an ABA receptor. Loss of function mutations in GCL1 show no ABA response defects based on assays of seed germination and seedling development.GCL1 also has similarity to LANCL1 and LANCL2, human homologs of bacterial lanthionine synthetase.; GCR2-like 1 (GCL1); FUNCTIONS IN: catalytic activity; INVOLVED IN: response to salt stress; LOCATED IN: extrinsic to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LanC-like protein, eukaryotic (InterPro:IPR020464), Six-hairpin glycosidase-like (InterPro:IPR008928), Lanthionine synthetase C-like (InterPro:IPR007822); BEST Arabidopsis thaliana protein match is: G protein coupled receptor (TAIR:AT1G52920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37998 : 442.0) no description available & (gnl|cdd|86797 : 287.0) no description available & (reliability: 1124.0) & (original description: Putative GCL1, Description = LanC-like protein GCL1, PFAM = PF05147)' T '35.1' 'not assigned.no ontology' 'niben044scf00035810ctg003_4711-10254' '(at5g63010 : 413.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G32950.1); Has 4234 Blast hits to 3983 proteins in 322 species: Archae - 2; Bacteria - 280; Metazoa - 1738; Fungi - 841; Plants - 754; Viruses - 0; Other Eukaryotes - 619 (source: NCBI BLink). & (gnl|cdd|35501 : 292.0) no description available & (reliability: 826.0) & (original description: Putative At5g63010, Description = WD40 domain-containing protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00036175ctg011_1-3852' '(at1g01225 : 310.0) NC domain-containing protein-related; CONTAINS InterPro DOMAIN/s: NC (InterPro:IPR007053); BEST Arabidopsis thaliana protein match is: NC domain-containing protein-related (TAIR:AT4G00905.1); Has 173 Blast hits to 172 proteins in 34 species: Archae - 0; Bacteria - 24; Metazoa - 5; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 620.0) & (original description: Putative BnaCnng08590D, Description = BnaCnng08590D protein, PFAM = PF04970)' T '35.1' 'not assigned.no ontology' 'niben044scf00036298ctg006_771-3434' '(at5g19820 : 258.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37382 : 147.0) no description available & (reliability: 516.0) & (original description: Putative emb2734, Description = BnaC09g37860D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00036338ctg004_5587-15109' '(at4g34280 : 592.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: U2A'/phosphoprotein 32 family A, C-terminal (InterPro:IPR003603), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G61210.2); Has 5718 Blast hits to 4596 proteins in 341 species: Archae - 5; Bacteria - 811; Metazoa - 2365; Fungi - 1046; Plants - 644; Viruses - 0; Other Eukaryotes - 847 (source: NCBI BLink). & (reliability: 1184.0) & (original description: Putative At4g34280, Description = At4g34280, PFAM = PF00400)' T '35.1' 'not assigned.no ontology' 'niben044scf00036687ctg002_3985-9610' '(at1g13635 : 324.0) DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT5G57970.2). & (gnl|cdd|86301 : 217.0) no description available & (reliability: 648.0) & (original description: Putative tag, Description = DNA-3-methyladenine glycosylase I, PFAM = PF03352)' T '35.1' 'not assigned.no ontology' 'niben044scf00037343ctg000_72-21433' '(at1g77600 : 776.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: binding (TAIR:AT5G47690.2). & (gnl|cdd|36738 : 435.0) no description available & (reliability: 1552.0) & (original description: Putative RCOM_1032140, Description = Androgen induced inhibitor of proliferation (As3) / pds5, putative, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00037501ctg004_8604-15467' '(at5g07830 : 618.0) Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-β-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be membrane-associated.; glucuronidase 2 (GUS2); FUNCTIONS IN: beta-glucuronidase activity; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 79, N-terminal (InterPro:IPR005199); BEST Arabidopsis thaliana protein match is: glucuronidase 1 (TAIR:AT5G61250.1); Has 380 Blast hits to 370 proteins in 68 species: Archae - 0; Bacteria - 29; Metazoa - 190; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|67288 : 335.0) no description available & (reliability: 1236.0) & (original description: Putative At5g61250, Description = Heparanase-like protein 2, PFAM = PF03662;PF03662)' T '35.1' 'not assigned.no ontology' 'niben044scf00037541ctg000_2863-8647' '(at3g07720 : 463.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: nitrile specifier protein 5 (TAIR:AT5G48180.1); Has 10920 Blast hits to 5857 proteins in 349 species: Archae - 8; Bacteria - 366; Metazoa - 5368; Fungi - 1057; Plants - 2178; Viruses - 16; Other Eukaryotes - 1927 (source: NCBI BLink). & (gnl|cdd|35600 : 254.0) no description available & (reliability: 926.0) & (original description: Putative BnaA06g30390D, Description = BnaA06g30390D protein, PFAM = PF13418;PF13418;PF01344;PF01344)' T '35.1' 'not assigned.no ontology' 'niben044scf00037673ctg007_1-4147' '(at2g43235 : 141.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 41 Blast hits to 41 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative At2g43235, Description = BnaCnng31620D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00037680ctg012_1-4919' '(at1g22860 : 152.0) Vacuolar sorting protein 39; FUNCTIONS IN: small GTPase regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Citron-like (InterPro:IPR001180), Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1 (InterPro:IPR019452), Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2 (InterPro:IPR019453); Has 401 Blast hits to 372 proteins in 133 species: Archae - 0; Bacteria - 2; Metazoa - 168; Fungi - 105; Plants - 74; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|37274 : 103.0) no description available & (reliability: 304.0) & (original description: Putative BnaA09g30320D, Description = Vacuolar sorting protein 39 domain protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00037950ctg000_1-8245' '(at3g07080 : 395.0) EamA-like transporter family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: EamA-like transporter family (TAIR:AT4G32140.1); Has 3286 Blast hits to 3282 proteins in 690 species: Archae - 51; Bacteria - 1416; Metazoa - 341; Fungi - 278; Plants - 200; Viruses - 0; Other Eukaryotes - 1000 (source: NCBI BLink). & (gnl|cdd|37976 : 325.0) no description available & (reliability: 790.0) & (original description: Putative BnaCnng52190D, Description = BnaCnng52190D protein, PFAM = PF06027)' T '35.1' 'not assigned.no ontology' 'niben044scf00037971ctg005_11725-17136' '(at3g14172 : 180.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G72410.1). & (reliability: 360.0) & (original description: Putative PGSC0003DMG400004896, Description = BnaA03g33240D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00038074ctg000_3329-7811' '(at2g26460 : 385.0) Encodes SMU2, a protein involved in RNA splicing.; SUPPRESSORS OF MEC-8 AND UNC-52 2 (SMU2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA splicing; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RED-like, N-terminal (InterPro:IPR012916), RED-like, C-terminal (InterPro:IPR012492); Has 470 Blast hits to 361 proteins in 150 species: Archae - 0; Bacteria - 2; Metazoa - 251; Fungi - 94; Plants - 62; Viruses - 3; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|37709 : 244.0) no description available & (gnl|cdd|71247 : 137.0) no description available & (reliability: 770.0) & (original description: Putative beag, Description = Protein Red, PFAM = PF07808;PF07807)' T '35.1' 'not assigned.no ontology' 'niben044scf00038309ctg001_7042-9649' '(at2g44510 : 238.0) CDK inhibitor P21 binding protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: CDK inhibitor P21 binding protein (TAIR:AT5G03830.1); Has 392 Blast hits to 392 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 150; Fungi - 138; Plants - 52; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|38244 : 133.0) no description available & (reliability: 476.0) & (original description: Putative At2g44510, Description = Protein BCCIP homolog, PFAM = PF13862)' T '35.1' 'not assigned.no ontology' 'niben044scf00038672ctg004_2849-8493' '(at2g07360 : 371.0) SH3 domain-containing protein; FUNCTIONS IN: binding; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Src homology-3 domain (InterPro:IPR001452), Armadillo-type fold (InterPro:IPR016024). & (reliability: 742.0) & (original description: Putative At2g07370, Description = Putative uncharacterized protein At2g07370, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00038681ctg005_618-8486' '(at5g04420 : 561.0) Galactose oxidase/kelch repeat superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 4 (TAIR:AT3G05420.1); Has 8531 Blast hits to 4263 proteins in 348 species: Archae - 19; Bacteria - 246; Metazoa - 3206; Fungi - 1070; Plants - 1911; Viruses - 10; Other Eukaryotes - 2069 (source: NCBI BLink). & (gnl|cdd|35600 : 250.0) no description available & (reliability: 1122.0) & (original description: Putative Os12g0540800, Description = Kelch motif family protein, expressed, PFAM = PF07646;PF13415;PF01344)' T '35.1' 'not assigned.no ontology' 'niben044scf00039595ctg009_29894-33213' '(at3g26040 : 296.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 2415 Blast hits to 2403 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 2353; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|66174 : 250.0) no description available & (o24645|hcbt1_diaca : 85.1) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 592.0) & (original description: Putative Ccrd_014329, Description = Chloramphenicol acetyltransferase-like domain-containing protein, PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'niben044scf00040005ctg006_2626-7406' '(at3g54380 : 134.0) SAC3/GANP/Nin1/mts3/eIF-3 p25 family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); BEST Arabidopsis thaliana protein match is: SAC3/GANP/Nin1/mts3/eIF-3 p25 family (TAIR:AT3G06290.1). & (reliability: 268.0) & (original description: Putative , Description = , PFAM = PF03399;PF03399)' T '35.1' 'not assigned.no ontology' 'niben044scf00040031ctg003_3531-14765' '(at2g35710 : 655.0) Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process, biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G16600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37161 : 96.4) no description available & (reliability: 1310.0) & (original description: Putative PGSIP8, Description = Putative glucuronosyltransferase PGSIP8, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00040228ctg001_1652-32904' '(at3g16260 : 1024.0) Encodes a tRNase Z.; tRNAse Z4 (TRZ4); FUNCTIONS IN: 3'-tRNA processing endoribonuclease activity, catalytic activity; INVOLVED IN: tRNA 3'-end processing, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease Z (InterPro:IPR013471); BEST Arabidopsis thaliana protein match is: tRNAse Z3 (TAIR:AT1G52160.1); Has 6299 Blast hits to 4396 proteins in 1654 species: Archae - 442; Bacteria - 4351; Metazoa - 254; Fungi - 243; Plants - 108; Viruses - 0; Other Eukaryotes - 901 (source: NCBI BLink). & (gnl|cdd|37332 : 689.0) no description available & (gnl|cdd|31427 : 181.0) no description available & (reliability: 2048.0) & (original description: Putative TRZ4, Description = tRNAse Z4, PFAM = PF13691)' T '35.1' 'not assigned.no ontology' 'niben044scf00040228ctg001_3784-9683' '(at3g16260 : 501.0) Encodes a tRNase Z.; tRNAse Z4 (TRZ4); FUNCTIONS IN: 3'-tRNA processing endoribonuclease activity, catalytic activity; INVOLVED IN: tRNA 3'-end processing, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease Z (InterPro:IPR013471); BEST Arabidopsis thaliana protein match is: tRNAse Z3 (TAIR:AT1G52160.1); Has 6299 Blast hits to 4396 proteins in 1654 species: Archae - 442; Bacteria - 4351; Metazoa - 254; Fungi - 243; Plants - 108; Viruses - 0; Other Eukaryotes - 901 (source: NCBI BLink). & (gnl|cdd|37332 : 319.0) no description available & (reliability: 1002.0) & (original description: Putative rnz, Description = Os01g0232300 protein, PFAM = PF13691)' T '35.1' 'not assigned.no ontology' 'niben044scf00040540ctg001_524-12094' '(at4g20325 : 318.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit B (InterPro:IPR019024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|88013 : 135.0) no description available & (gnl|cdd|39903 : 93.6) no description available & (reliability: 636.0) & (original description: Putative At4g20325, Description = Ribonuclease H2 subunit B domain-containing protein, PFAM = PF09468)' T '35.1' 'not assigned.no ontology' 'niben044scf00041310ctg001_1-9833' '(at3g48860 : 237.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23700.1); Has 12429 Blast hits to 9751 proteins in 897 species: Archae - 180; Bacteria - 1190; Metazoa - 6552; Fungi - 1361; Plants - 886; Viruses - 50; Other Eukaryotes - 2210 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative RRP1, Description = Ripening-regulated protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00041451ctg003_1-4446' '(at4g21585 : 153.0) Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro.; endonuclease 4 (ENDO4); FUNCTIONS IN: endonuclease activity, nucleic acid binding; INVOLVED IN: DNA catabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Phospholipase C/P1 nuclease, core (InterPro:IPR008947), S1/P1 nuclease (InterPro:IPR003154); BEST Arabidopsis thaliana protein match is: endonuclease 5 (TAIR:AT4G21600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85937 : 148.0) no description available & (reliability: 306.0) & (original description: Putative ENDO4, Description = Nuclease PA3, PFAM = PF02265)' T '35.1' 'not assigned.no ontology' 'niben044scf00041547ctg001_12163-17416' '(at2g36330 : 196.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT5G62820.1); Has 241 Blast hits to 239 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 1; Plants - 232; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68120 : 103.0) no description available & (reliability: 392.0) & (original description: Putative PGSC0003DMG400024498, Description = CASP-like protein, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben044scf00041766ctg005_1-5966' '(at1g20540 : 381.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: DWD (DDB1-binding WD40 protein) hypersensitive to ABA 2 (TAIR:AT1G76260.1); Has 8926 Blast hits to 7393 proteins in 418 species: Archae - 0; Bacteria - 876; Metazoa - 3687; Fungi - 2097; Plants - 1353; Viruses - 0; Other Eukaryotes - 913 (source: NCBI BLink). & (gnl|cdd|36225 : 251.0) no description available & (reliability: 762.0) & (original description: Putative DWA2, Description = Protein DWD HYPERSENSITIVE TO ABA 2, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00041775ctg003_16659-20781' '(gnl|cdd|69288 : 230.0) no description available & (at3g05500 : 207.0) Rubber elongation factor protein (REF); INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rubber elongation factor (InterPro:IPR008802); BEST Arabidopsis thaliana protein match is: Rubber elongation factor protein (REF) (TAIR:AT2G47780.1); Has 129 Blast hits to 129 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q9fra7|y5940_orysa : 185.0) Putative REF/SRPP-like protein Os05g0151300 - Oryza sativa (Rice) & (reliability: 414.0) & (original description: Putative SRP, Description = Stress-related protein, PFAM = PF05755)' T '35.1' 'not assigned.no ontology' 'niben044scf00042018ctg000_3114-7600' '(at5g64550 : 535.0) loricrin-related; BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G09670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1070.0) & (original description: Putative Os04g0458200, Description = Os04g0458200 protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00042447ctg001_359-6186' '(at2g03510 : 521.0) SPFH/Band 7/PHB domain-containing membrane-associated protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); Has 1337 Blast hits to 1335 proteins in 540 species: Archae - 4; Bacteria - 923; Metazoa - 173; Fungi - 0; Plants - 41; Viruses - 8; Other Eukaryotes - 188 (source: NCBI BLink). & (gnl|cdd|38173 : 468.0) no description available & (gnl|cdd|48218 : 467.0) no description available & (reliability: 1042.0) & (original description: Putative ERLIN2, Description = Erlin-2, PFAM = PF01145)' T '35.1' 'not assigned.no ontology' 'niben044scf00042948ctg004_19658-25784' '(at3g20270 : 282.0) lipid-binding serum glycoprotein family protein; FUNCTIONS IN: lipid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bactericidal permeability-increasing protein, alpha/beta domain (InterPro:IPR017943), F-box domain, Skp2-like (InterPro:IPR022364), Lipid-binding serum glycoprotein, N-terminal (InterPro:IPR017942), Lipid-binding serum glycoprotein, C-terminal (InterPro:IPR001124); BEST Arabidopsis thaliana protein match is: lipid-binding serum glycoprotein family protein (TAIR:AT1G04970.1). & (reliability: 564.0) & (original description: Putative At3g20270, Description = Lipid-binding serum glycoprotein family protein, PFAM = PF12937)' T '35.1' 'not assigned.no ontology' 'niben044scf00043508ctg007_9873-18072' '(at1g29810 : 189.0) Transcriptional coactivator/pterin dehydratase; FUNCTIONS IN: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity, dihydroxy-acid dehydratase activity; INVOLVED IN: tetrahydrobiopterin biosynthetic process; CONTAINS InterPro DOMAIN/s: Transcriptional coactivator/pterin dehydratase (InterPro:IPR001533); BEST Arabidopsis thaliana protein match is: Transcriptional coactivator/pterin dehydratase (TAIR:AT5G51110.1); Has 4058 Blast hits to 4056 proteins in 962 species: Archae - 80; Bacteria - 1882; Metazoa - 205; Fungi - 16; Plants - 92; Viruses - 0; Other Eukaryotes - 1783 (source: NCBI BLink). & (gnl|cdd|48349 : 104.0) no description available & (gnl|cdd|39276 : 94.3) no description available & (reliability: 378.0) & (original description: Putative pdl2, Description = Putative pterin-4-alpha-carbinolamine dehydratase, PFAM = PF01329)' T '35.1' 'not assigned.no ontology' 'niben044scf00043534ctg000_1-5419' '(at2g13690 : 484.0) PRLI-interacting factor, putative; BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT5G60050.1); Has 259 Blast hits to 259 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 259; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 968.0) & (original description: Putative F13J11, Description = BTB/POZ domain-containing protein At2g13690, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00043627ctg000_2308-6656' '(at1g65030 : 369.0) This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase; Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: protein binding, nucleotide binding; LOCATED IN: nucleolus, CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); Has 5965 Blast hits to 4406 proteins in 385 species: Archae - 22; Bacteria - 1754; Metazoa - 1570; Fungi - 1477; Plants - 405; Viruses - 0; Other Eukaryotes - 737 (source: NCBI BLink). & (gnl|cdd|35515 : 304.0) no description available & (gnl|cdd|29257 : 93.1) no description available & (reliability: 738.0) & (original description: Putative At1g65030, Description = At1g65030, PFAM = PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben044scf00043985ctg000_1-7816' '(at5g07630 : 423.0) lipid transporters; FUNCTIONS IN: lipid transporter activity; INVOLVED IN: nuclear division, lipid transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RFT1 (InterPro:IPR007594); Has 367 Blast hits to 362 proteins in 190 species: Archae - 2; Bacteria - 15; Metazoa - 110; Fungi - 135; Plants - 51; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|38075 : 234.0) no description available & (gnl|cdd|68091 : 116.0) no description available & (reliability: 846.0) & (original description: Putative Os07g0486100, Description = Os07g0486100 protein, PFAM = PF04506)' T '35.1' 'not assigned.no ontology' 'niben044scf00044337ctg000_353-7642' '(at5g07630 : 243.0) lipid transporters; FUNCTIONS IN: lipid transporter activity; INVOLVED IN: nuclear division, lipid transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RFT1 (InterPro:IPR007594); Has 367 Blast hits to 362 proteins in 190 species: Archae - 2; Bacteria - 15; Metazoa - 110; Fungi - 135; Plants - 51; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|38075 : 140.0) no description available & (gnl|cdd|68091 : 100.0) no description available & (reliability: 486.0) & (original description: Putative RFT1, Description = Nuclear division RFT1-like protein, PFAM = PF04506)' T '35.1' 'not assigned.no ontology' 'niben044scf00044462ctg007_7101-10431' '(at4g24930 : 144.0) thylakoid lumenal 17.9 kDa protein, chloroplast; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 48 Blast hits to 48 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative IDP1426, Description = Thylakoid lumenal 17.9 kDa protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00045071ctg001_1-3627' '(at1g05820 : 198.0) SIGNAL PEPTIDE PEPTIDASE-LIKE 5 (SPPL5); FUNCTIONS IN: peptidase activity, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22B, signal peptide peptidase (InterPro:IPR007369); BEST Arabidopsis thaliana protein match is: SIGNAL PEPTIDE PEPTIDASE-LIKE 3 (TAIR:AT2G43070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37653 : 167.0) no description available & (gnl|cdd|67855 : 141.0) no description available & (reliability: 396.0) & (original description: Putative sppl2, Description = Signal peptide peptidase-like 2B, PFAM = PF04258)' T '35.1' 'not assigned.no ontology' 'niben044scf00045366ctg001_547-4082' '(at2g33550 : 212.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT4G31270.1); Has 743 Blast hits to 735 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 8; Plants - 568; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (reliability: 424.0) & (original description: Putative ASR3, Description = Trihelix transcription factor ASR3, PFAM = PF13837)' T '35.1' 'not assigned.no ontology' 'niben044scf00045549ctg001_10329-19445' '(at1g69340 : 434.0) appr-1-p processing enzyme family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Appr-1-p processing (InterPro:IPR002589); BEST Arabidopsis thaliana protein match is: appr-1-p processing enzyme family protein (TAIR:AT2G40600.1); Has 3597 Blast hits to 3538 proteins in 1210 species: Archae - 64; Bacteria - 1971; Metazoa - 984; Fungi - 140; Plants - 224; Viruses - 8; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|28845 : 234.0) no description available & (gnl|cdd|37844 : 210.0) no description available & (reliability: 868.0) & (original description: Putative ymdB, Description = O-acetyl-ADP-ribose deacetylase, PFAM = PF13716;PF01661)' T '35.1' 'not assigned.no ontology' 'niben044scf00045788ctg000_1-8688' '(at5g11560 : 1264.0) catalytics; FUNCTIONS IN: catalytic activity; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1620 (InterPro:IPR011678), Quinonprotein alcohol dehydrogenase-like (InterPro:IPR011047); Has 475 Blast hits to 428 proteins in 206 species: Archae - 4; Bacteria - 52; Metazoa - 151; Fungi - 150; Plants - 40; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (gnl|cdd|37314 : 728.0) no description available & (gnl|cdd|87370 : 358.0) no description available & (reliability: 2528.0) & (original description: Putative At5g11560, Description = PQQ_DH domain-containing protein, PFAM = PF07774;PF13360)' T '35.1' 'not assigned.no ontology' 'niben044scf00046528ctg006_2109-9489' '(at3g13800 : 520.0) Metallo-hydrolase/oxidoreductase superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: Metallo-hydrolase/oxidoreductase superfamily protein (TAIR:AT1G30300.1); Has 2805 Blast hits to 2783 proteins in 774 species: Archae - 62; Bacteria - 1390; Metazoa - 7; Fungi - 23; Plants - 100; Viruses - 0; Other Eukaryotes - 1223 (source: NCBI BLink). & (gnl|cdd|74115 : 133.0) no description available & (reliability: 1040.0) & (original description: Putative At3g13800, Description = At3g13800, PFAM = PF12706)' T '35.1' 'not assigned.no ontology' 'niben044scf00046767ctg001_5261-19634' '(at5g22320 : 263.0) Leucine-rich repeat (LRR) family protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 4 (TAIR:AT4G35470.1). & (reliability: 526.0) & (original description: Putative BnaC05g38030D, Description = Protein phosphatase 1 regulatory subunit 7, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00046879ctg000_565-5139' '(at2g01190 : 251.0) Octicosapeptide/Phox/Bem1p family protein; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT3G18230.1); Has 5347 Blast hits to 4615 proteins in 344 species: Archae - 4; Bacteria - 100; Metazoa - 2308; Fungi - 1293; Plants - 931; Viruses - 29; Other Eukaryotes - 682 (source: NCBI BLink). & (gnl|cdd|47941 : 81.4) no description available & (reliability: 502.0) & (original description: Putative At2g01190, Description = Expressed protein, PFAM = PF00564)' T '35.1' 'not assigned.no ontology' 'niben044scf00047578ctg003_2407-6896' '(at1g30910 : 196.0) Molybdenum cofactor sulfurase family protein; FUNCTIONS IN: molybdenum ion binding, Mo-molybdopterin cofactor sulfurase activity, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), MOSC, N-terminal beta barrel (InterPro:IPR005303), Molybdenum cofactor sulfurase, C-terminal (InterPro:IPR005302); BEST Arabidopsis thaliana protein match is: Molybdenum cofactor sulfurase family protein (TAIR:AT5G44720.1); Has 1932 Blast hits to 1913 proteins in 692 species: Archae - 10; Bacteria - 1072; Metazoa - 332; Fungi - 283; Plants - 100; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|37573 : 157.0) no description available & (gnl|cdd|33030 : 96.2) no description available & (reliability: 392.0) & (original description: Putative ARC, Description = Mo-molybdopterin cofactor sulfurase, PFAM = PF03473)' T '35.1' 'not assigned.no ontology' 'niben044scf00047657ctg001_248-4885' '(at5g28750 : 95.5) Bacterial sec-independent translocation protein mttA/Hcf106; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, protein transport; LOCATED IN: chloroplast thylakoid membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial sec-independent translocation protein mttA/Hcf106 (InterPro:IPR003369), Twin-arginine translocation protein TatA/E (InterPro:IPR006312); BEST Arabidopsis thaliana protein match is: Bacterial sec-independent translocation protein mttA/Hcf106 (TAIR:AT5G52440.1); Has 3112 Blast hits to 3112 proteins in 1115 species: Archae - 68; Bacteria - 2578; Metazoa - 0; Fungi - 0; Plants - 106; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 191.0) & (original description: Putative tatA, Description = Sec-independent protein translocase protein TatA, PFAM = PF02416)' T '35.1' 'not assigned.no ontology' 'niben044scf00048271ctg006_1-2089' '(at2g40190 : 356.0) Encodes a putative alpha-1,2-mannosyltransferase in N-linked glycoprotein (homologous to yeast ALG11). Plays vital roles in cell-wall biosynthesis and abiotic stress response. Located in endoplasmic reticulum membrane.; LEAF WILTING 3 (LEW3); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G78800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36601 : 234.0) no description available & (reliability: 712.0) & (original description: Putative alg11, Description = GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase, PFAM = PF15924;PF00534)' T '35.1' 'not assigned.no ontology' 'niben044scf00048271ctg007_105-1726' '(at2g40190 : 145.0) Encodes a putative alpha-1,2-mannosyltransferase in N-linked glycoprotein (homologous to yeast ALG11). Plays vital roles in cell-wall biosynthesis and abiotic stress response. Located in endoplasmic reticulum membrane.; LEAF WILTING 3 (LEW3); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G78800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36601 : 87.7) no description available & (reliability: 290.0) & (original description: Putative GlT, Description = Glycosyl transferase family 1 protein, PFAM = PF15924)' T '35.1' 'not assigned.no ontology' 'niben044scf00048699ctg004_11987-14514' '(at3g26040 : 119.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 2415 Blast hits to 2403 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 2353; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|66174 : 84.6) no description available & (reliability: 238.0) & (original description: Putative , Description = Transferase family protein, PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'niben044scf00048891ctg001_855-7212' '(at1g04555 : 108.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G33380.1); Has 84 Blast hits to 83 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative BnaC05g02670D, Description = BnaC05g02670D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00049538ctg001_1-7539' '(gnl|cdd|36491 : 808.0) no description available & (at1g10950 : 800.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis.; transmembrane nine 1 (TMN1); LOCATED IN: integral to membrane, Golgi apparatus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G37310.1); Has 1611 Blast hits to 1538 proteins in 326 species: Archae - 0; Bacteria - 16; Metazoa - 610; Fungi - 273; Plants - 454; Viruses - 0; Other Eukaryotes - 258 (source: NCBI BLink). & (gnl|cdd|66650 : 568.0) no description available & (reliability: 1600.0) & (original description: Putative TMN1, Description = Transmembrane 9 superfamily member 1, PFAM = PF02990)' T '35.1' 'not assigned.no ontology' 'niben044scf00050466ctg001_3879-8890' '(at4g36280 : 232.0) Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: compromised recognition of TCV 1 (TAIR:AT4G36290.1); Has 498 Blast hits to 482 proteins in 78 species: Archae - 0; Bacteria - 36; Metazoa - 219; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|37056 : 166.0) no description available & (reliability: 432.0) & (original description: Putative morc3, Description = Histidine kinase-like ATPase, ATP-binding domain-containing protein, PFAM = PF13589)' T '35.1' 'not assigned.no ontology' 'niben044scf00050746ctg003_718-6983' '(at5g60620 : 572.0) Glycerol-3-phosphate acyltransferase localized to the ER. Similar to mammalian cells involved in storage oil formation.; glycerol-3-phosphate acyltransferase 9 (GPAT9); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: triglyceride biosynthetic process, diacylglycerol biosynthetic process, metabolic process; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: Phospholipid/glycerol acyltransferase family protein (TAIR:AT1G80950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38109 : 214.0) no description available & (gnl|cdd|65360 : 90.4) no description available & (reliability: 1144.0) & (original description: Putative GPAT, Description = sn-glycerol-3-phosphate acyltransferase, PFAM = PF01553)' T '35.1' 'not assigned.no ontology' 'niben044scf00050861ctg000_747-3899' '(at1g45170 : 246.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42960.1); Has 60 Blast hits to 60 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative OEP24, Description = Chloroplastic outer envelope pore protein of 24 kDa, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00051152ctg001_10900-15578' '(at2g25110 : 319.0) Encodes an endoplasmic reticulum protein SDF2 (stromal-derived factor-2). Forms a complex SDF2-ERdj3B-BiP that is required for the proper accumulation of the surface-exposed leucine-rich repeat receptor kinases EFR. EFR is involved in PAMP (pathogen associated molecular patterns) triggered immunity.; stromal cell-derived factor 2-like protein precursor (SDF2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response to bacterium, defense response to fungus, PAMP-induced immunity; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: MIR (InterPro:IPR003608), MIR motif (InterPro:IPR016093); Has 1035 Blast hits to 992 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 386; Fungi - 512; Plants - 64; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|38568 : 253.0) no description available & (gnl|cdd|32111 : 115.0) no description available & (reliability: 638.0) & (original description: Putative SDF2, Description = Stromal cell-derived factor 2-like protein, PFAM = PF02815)' T '35.1' 'not assigned.no ontology' 'niben044scf00051841ctg003_2648-7674' '(at1g55830 : 269.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF812 (InterPro:IPR008530). & (gnl|cdd|69204 : 215.0) no description available & (gnl|cdd|37148 : 212.0) no description available & (reliability: 538.0) & (original description: Putative F383_27046, Description = Coiled-coil domain-containing 22, PFAM = PF05667;PF05667)' T '35.1' 'not assigned.no ontology' 'niben044scf00052365ctg002_821-3927' '(at1g29380 : 130.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT2G30933.1); Has 79591 Blast hits to 28935 proteins in 1734 species: Archae - 133; Bacteria - 28582; Metazoa - 23109; Fungi - 4542; Plants - 9902; Viruses - 1060; Other Eukaryotes - 12263 (source: NCBI BLink). & (gnl|cdd|87420 : 128.0) no description available & (p52409|e13b_wheat : 92.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 260.0) & (original description: Putative KK1_040997, Description = Glucan endo-1,3-beta-glucosidase 7, PFAM = PF07983)' T '35.1' 'not assigned.no ontology' 'niben044scf00052459ctg000_6184-13450' '(at5g41620 : 358.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: intracellular protein transport protein USO1-related (TAIR:AT1G64180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 716.0) & (original description: Putative At5g41620, Description = Uncharacterized protein At5g41620, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00052993ctg003_1-9995' '(at2g22530 : 573.0) Alkaline-phosphatase-like family protein; FUNCTIONS IN: transferase activity, catalytic activity; INVOLVED IN: metabolic process, phospholipid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase (InterPro:IPR002591), Alkaline-phosphatase-like, core domain (InterPro:IPR017850); BEST Arabidopsis thaliana protein match is: Alkaline-phosphatase-like family protein (TAIR:AT5G17250.1); Has 1578 Blast hits to 1403 proteins in 374 species: Archae - 4; Bacteria - 326; Metazoa - 515; Fungi - 456; Plants - 91; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink). & (gnl|cdd|37336 : 341.0) no description available & (reliability: 1146.0) & (original description: Putative pigg, Description = GPI ethanolamine phosphate transferase 2, PFAM = PF01663)' T '35.1' 'not assigned.no ontology' 'niben044scf00054181ctg005_5443-9477' '(at5g13020 : 269.0) Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), ENT (InterPro:IPR005491); BEST Arabidopsis thaliana protein match is: Emsy N Terminus (ENT) domain-containing protein (TAIR:AT2G44440.1); Has 417 Blast hits to 397 proteins in 49 species: Archae - 0; Bacteria - 2; Metazoa - 101; Fungi - 4; Plants - 307; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|39874 : 150.0) no description available & (gnl|cdd|67356 : 111.0) no description available & (reliability: 538.0) & (original description: Putative rif1, Description = Emsy N Terminus/ plant Tudor-like domains-containing protein isoform 1, PFAM = PF03735)' T '35.1' 'not assigned.no ontology' 'niben044scf00054918ctg002_46301-50005' '(at5g56170 : 152.0) LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 (LLG1); BEST Arabidopsis thaliana protein match is: lorelei (TAIR:AT4G26466.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative gap, Description = Putative GPI-anchored protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00055702ctg001_1-6605' '(at5g42870 : 238.0) phosphatidic acid phosphohydrolase 2 (PAH2); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: cellular response to phosphate starvation, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LNS2, Lipin/Ned1/Smp2 (InterPro:IPR013209), Lipin, N-terminal conserved region (InterPro:IPR007651); BEST Arabidopsis thaliana protein match is: Lipin family protein (TAIR:AT3G09560.3). & (gnl|cdd|37327 : 228.0) no description available & (gnl|cdd|34687 : 137.0) no description available & (reliability: 476.0) & (original description: Putative Fld, Description = Phosphatidate phosphatase LPIN1, PFAM = PF08235;PF04571)' T '35.1' 'not assigned.no ontology' 'niben044scf00056128ctg002_1-3824' '(at1g15740 : 156.0) Leucine-rich repeat family protein; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G23840.1); Has 38052 Blast hits to 19856 proteins in 856 species: Archae - 6; Bacteria - 8624; Metazoa - 11681; Fungi - 680; Plants - 12072; Viruses - 79; Other Eukaryotes - 4910 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative PGSC0003DMG400030688, Description = F-box/LRR-repeat protein 14, PFAM = PF13516;PF13516;PF13855)' T '35.1' 'not assigned.no ontology' 'niben044scf00056389ctg001_1707-10607' '(at1g49540 : 1090.0) elongator protein 2 (ELP2); FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G11160.1). & (gnl|cdd|36281 : 752.0) no description available & (gnl|cdd|29257 : 103.0) no description available & (reliability: 2180.0) & (original description: Putative ELP2, Description = Elongator complex protein 2, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben044scf00056389ctg001_1713-10643' '(at1g49540 : 1090.0) elongator protein 2 (ELP2); FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G11160.1). & (gnl|cdd|36281 : 753.0) no description available & (gnl|cdd|29257 : 103.0) no description available & (reliability: 2180.0) & (original description: Putative ELP2, Description = Elongator complex protein 2, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben044scf00056657ctg002_804-6658' '(gnl|cdd|72813 : 322.0) no description available & (at3g05270 : 278.0) Plant protein of unknown function (DUF869); EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G21810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 556.0) & (original description: Putative FPP3, Description = Filament-like plant protein 3, PFAM = PF05911;PF05911;PF05911;PF05911)' T '35.1' 'not assigned.no ontology' 'niben044scf00056752ctg002_1-4977' '(at2g15730 : 464.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G34420.1); Has 149 Blast hits to 147 proteins in 26 species: Archae - 0; Bacteria - 31; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 898.0) & (original description: Putative PGSC0003DMG400021015, Description = Sulfotransferase, PFAM = PF00685)' T '35.1' 'not assigned.no ontology' 'niben044scf00056758ctg002_1-2872' '(at3g20920 : 164.0) translocation protein-related; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translocation protein Sec62 (InterPro:IPR004728); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative At3g20920, Description = Putative ovule protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00056766ctg000_1-5030' '(at5g58740 : 285.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT4G27890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37476 : 158.0) no description available & (reliability: 570.0) & (original description: Putative pco073370, Description = Small heat shock protein 18.1, PFAM = PF04969)' T '35.1' 'not assigned.no ontology' 'niben044scf00056871ctg000_8078-17806' '(at3g45040 : 595.0) Encodes a putative dolichol kinase.; phosphatidate cytidylyltransferase family protein; FUNCTIONS IN: phosphatidate cytidylyltransferase activity, dolichol kinase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 410 Blast hits to 408 proteins in 217 species: Archae - 14; Bacteria - 44; Metazoa - 111; Fungi - 131; Plants - 43; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|37679 : 318.0) no description available & (reliability: 1190.0) & (original description: Putative EVN, Description = Dolichol kinase EVAN, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00058080ctg002_1742-4625' '(at1g59590 : 114.0) ZCF37 mRNA, complete cds; ZCF37; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10220.1); Has 33 Blast hits to 33 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative PGSC0003DMG400010618, Description = ZCF37, putative, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00058678ctg000_5820-9430' '(at4g14490 : 119.0) SMAD/FHA domain-containing protein ; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: SMAD/FHA domain-containing protein (TAIR:AT3G02400.1); Has 1713 Blast hits to 1668 proteins in 445 species: Archae - 15; Bacteria - 1228; Metazoa - 80; Fungi - 66; Plants - 132; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative BnaA01g33000D, Description = FHA domain plant protein, PFAM = PF00498)' T '35.1' 'not assigned.no ontology' 'niben044scf00058883ctg001_1-2205' '(at5g02890 : 134.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT4G29250.1); Has 524 Blast hits to 524 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 520; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative At5g02890, Description = Taxadien-5-alpha-ol O-acetyltransferase, PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'niben044scf00059366ctg000_10778-19487' '(at1g10865 : 102.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase assembly protein PET191, N-terminal (InterPro:IPR018793); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative , Description = , PFAM = PF10203)' T '35.1' 'not assigned.no ontology' 'niben044scf00059437ctg002_28122-30883' '(q94de2|bd31a_orysa : 234.0) Protein BUD31 homolog 1 (Protein G10 homolog 1) - Oryza sativa (Rice) & (at4g21110 : 233.0) G10 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: G10 protein (InterPro:IPR001748), BUD31/G10-related, conserved site (InterPro:IPR018230); Has 466 Blast hits to 466 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 189; Fungi - 126; Plants - 80; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|64960 : 208.0) no description available & (gnl|cdd|38614 : 205.0) no description available & (reliability: 466.0) & (original description: Putative g10, Description = Cell cycle control protein cwf14, PFAM = PF01125)' T '35.1' 'not assigned.no ontology' 'niben044scf00059475ctg000_3894-5849' '(at2g36290 : 162.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G74300.1); Has 970 Blast hits to 968 proteins in 224 species: Archae - 20; Bacteria - 476; Metazoa - 0; Fungi - 77; Plants - 313; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative HDL-1, Description = Hydrolase, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben044scf00059867ctg001_24607-28639' '(at2g32590 : 112.0) LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits to 447 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other Eukaryotes - 108 (source: NCBI BLink). & (gnl|cdd|86950 : 88.6) no description available & (gnl|cdd|37539 : 82.4) no description available & (reliability: 224.0) & (original description: Putative CAPH, Description = Condensin complex subunit 2, PFAM = PF05786)' T '35.1' 'not assigned.no ontology' 'niben044scf00059913ctg000_1-5491' '(at5g40300 : 166.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G36330.1); Has 212 Blast hits to 212 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|68120 : 97.0) no description available & (reliability: 332.0) & (original description: Putative PGSC0003DMG403000524, Description = CASP-like protein, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben044scf00059967ctg000_17544-25149' '(at1g27760 : 265.0) Encodes a protein with similarity to human interferon-related developmental regulator (IFRD)that is involved in salt tolerance. Loss of function mutations are hypersensitive to salt stress and have reduced fertility. SAT32 is found in the cytoplasm but appears to translocate to the nucleus when plants are subject to salt stress.; SALT-TOLERANCE 32 (SAT32); FUNCTIONS IN: binding; INVOLVED IN: response to salt stress; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Interferon-related developmental regulator, N-terminal (InterPro:IPR007701), Interferon-related developmental regulator, C-terminal (InterPro:IPR006921), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68573 : 137.0) no description available & (reliability: 530.0) & (original description: Putative SAT32, Description = BnaA07g08760D protein, PFAM = PF05004)' T '35.1' 'not assigned.no ontology' 'niben044scf00061122ctg000_10110-14166' '(at1g67360 : 192.0) Rubber elongation factor protein (REF); INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rubber elongation factor (InterPro:IPR008802); BEST Arabidopsis thaliana protein match is: Rubber elongation factor protein (REF) (TAIR:AT2G47780.1); Has 125 Blast hits to 125 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69288 : 192.0) no description available & (o82803|srpp_hevbr : 106.0) Small rubber particle protein (SRPP) (22 kDa rubber particle protein) (22 kDa RPP) (Latex allergen Hev b 3) (27 kDa natural rubber allergen) - Hevea brasiliensis (Para rubber tree) & (reliability: 384.0) & (original description: Putative At1g67360, Description = REF/SRPP-like protein At1g67360, PFAM = PF05755)' T '35.1' 'not assigned.no ontology' 'niben101ctg13781_1-2163' '(gnl|cdd|66174 : 205.0) no description available & (at3g26040 : 196.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 2415 Blast hits to 2403 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 2353; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (o23917|hcbt2_diaca : 92.4) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 392.0) & (original description: Putative CV86, Description = Putative spermidine hydroxycinnamoyl transferase, PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'niben101ctg14991_1-2341' '(at5g38520 : 428.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G19850.1); Has 8675 Blast hits to 8672 proteins in 1315 species: Archae - 112; Bacteria - 5902; Metazoa - 505; Fungi - 108; Plants - 578; Viruses - 6; Other Eukaryotes - 1464 (source: NCBI BLink). & (gnl|cdd|36667 : 163.0) no description available & (gnl|cdd|30941 : 104.0) no description available & (reliability: 856.0) & (original description: Putative tlr1892, Description = Tlr1892 protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101ctg15035_486-3377' '(at2g39530 : 89.7) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G39518.1); Has 200 Blast hits to 200 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative PIMP1, Description = CASP-like protein PIMP1, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101ctg15364_1186-3908' '(at1g58007 : 89.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09812.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative Sb03g041560, Description = Putative uncharacterized protein Sb03g041560, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101ctg15987_690-6141' '(at4g23895 : 261.0) Pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: nucleoside diphosphate kinase activity, ATP binding; INVOLVED IN: UTP biosynthetic process, GTP biosynthetic process, CTP biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Nucleoside diphosphate kinase, core (InterPro:IPR001564), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Nucleoside diphosphate kinase family protein (TAIR:AT4G23900.1). & (reliability: 522.0) & (original description: Putative At4g23895, Description = Pleckstrin homology (PH) domain-containing protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101ctg16084_3025-5894' '(at2g17570 : 343.0) Undecaprenyl pyrophosphate synthetase family protein; FUNCTIONS IN: transferase activity, transferring alkyl or aryl (other than methyl) groups; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Di-trans-poly-cis-decaprenylcistransferase-like, conserved site (InterPro:IPR018520), Di-trans-poly-cis-decaprenylcistransferase-like (InterPro:IPR001441); BEST Arabidopsis thaliana protein match is: Undecaprenyl pyrophosphate synthetase family protein (TAIR:AT5G60510.1); Has 9017 Blast hits to 8995 proteins in 2779 species: Archae - 230; Bacteria - 5298; Metazoa - 197; Fungi - 223; Plants - 211; Viruses - 0; Other Eukaryotes - 2858 (source: NCBI BLink). & (gnl|cdd|36815 : 279.0) no description available & (gnl|cdd|29593 : 220.0) no description available & (reliability: 686.0) & (original description: Putative At2g17570, Description = Dehydrodolichyl diphosphate synthase 6, PFAM = PF01255)' T '35.1' 'not assigned.no ontology' 'niben101scf00005_154428-167237' '(at1g63810 : 1157.0) CONTAINS InterPro DOMAIN/s: Nrap protein (InterPro:IPR005554); Has 396 Blast hits to 382 proteins in 182 species: Archae - 3; Bacteria - 2; Metazoa - 142; Fungi - 146; Plants - 43; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|67428 : 732.0) no description available & (gnl|cdd|37265 : 631.0) no description available & (reliability: 2314.0) & (original description: Putative At1g63810, Description = Putative uncharacterized protein At1g63810, PFAM = PF17407;PF03813;PF17403;PF17406;PF17405;PF17404)' T '35.1' 'not assigned.no ontology' 'niben101scf00021_41878-44372' '(gnl|cdd|71242 : 85.8) no description available & (at1g14060 : 84.0) GCK domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: GCK (InterPro:IPR012891); BEST Arabidopsis thaliana protein match is: GCK domain-containing protein (TAIR:AT5G02210.1); Has 325 Blast hits to 285 proteins in 75 species: Archae - 0; Bacteria - 2; Metazoa - 95; Fungi - 33; Plants - 117; Viruses - 2; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative PGSC0003DMG400002853, Description = GCK domain protein, PFAM = PF07802)' T '35.1' 'not assigned.no ontology' 'niben101scf00021_57968-62758' '(at5g15290 : 154.0) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT1G14160.1); Has 635 Blast hits to 635 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 635; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68120 : 118.0) no description available & (reliability: 308.0) & (original description: Putative STG, Description = CASP-like protein, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf00022_938763-944688' '(at5g21920 : 193.0) YLMG2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function YGGT (InterPro:IPR003425); BEST Arabidopsis thaliana protein match is: YGGT family protein (TAIR:AT4G27990.1). & (reliability: 386.0) & (original description: Putative YLMG2, Description = YlmG homolog protein 2, chloroplastic, PFAM = PF02325)' T '35.1' 'not assigned.no ontology' 'niben101scf00034_520305-526621' '(at3g50830 : 295.0) cold acclimation protein WCOR413-like protein beta form. Transcript is not detectable.; cold-regulated 413-plasma membrane 2 (COR413-PM2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cold acclimation WCOR413 (InterPro:IPR008892); BEST Arabidopsis thaliana protein match is: Cold acclimation protein WCOR413 family (TAIR:AT4G37220.1); Has 158 Blast hits to 155 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69104 : 263.0) no description available & (reliability: 590.0) & (original description: Putative COR413PM2, Description = Cold-regulated 413 plasma membrane protein 2, PFAM = PF05562)' T '35.1' 'not assigned.no ontology' 'niben101scf00057_90087-95973' '(at5g10460 : 432.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIA, hypothetical 3 (InterPro:IPR006356); Has 4117 Blast hits to 4117 proteins in 1113 species: Archae - 73; Bacteria - 2243; Metazoa - 198; Fungi - 54; Plants - 37; Viruses - 0; Other Eukaryotes - 1512 (source: NCBI BLink). & (gnl|cdd|30992 : 144.0) no description available & (reliability: 864.0) & (original description: Putative umc1254, Description = HAD-superfamily hydrolase, subfamily IIA, PFAM = PF13344;PF13242)' T '35.1' 'not assigned.no ontology' 'niben101scf00058_221244-231503' '(at4g15520 : 326.0) tRNA/rRNA methyltransferase (SpoU) family protein; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537); Has 7549 Blast hits to 7548 proteins in 2062 species: Archae - 19; Bacteria - 6000; Metazoa - 86; Fungi - 2; Plants - 92; Viruses - 0; Other Eukaryotes - 1350 (source: NCBI BLink). & (gnl|cdd|36056 : 158.0) no description available & (gnl|cdd|84887 : 120.0) no description available & (reliability: 652.0) & (original description: Putative dl3800w, Description = tRNA/rRNA methyltransferase, SpoU, PFAM = PF00588)' T '35.1' 'not assigned.no ontology' 'niben101scf00059_457801-460853' '(at2g37400 : 273.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid lumen, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G53560.1); Has 2154 Blast hits to 1804 proteins in 477 species: Archae - 203; Bacteria - 1195; Metazoa - 120; Fungi - 25; Plants - 138; Viruses - 0; Other Eukaryotes - 473 (source: NCBI BLink). & (reliability: 546.0) & (original description: Putative At2g37400, Description = At2g37400, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00063_654405-661584' '(at2g28390 : 549.0) SAND family protein; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar fusion protein MON1 (InterPro:IPR004353); Has 753 Blast hits to 594 proteins in 226 species: Archae - 6; Bacteria - 38; Metazoa - 289; Fungi - 213; Plants - 47; Viruses - 3; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|66814 : 223.0) no description available & (gnl|cdd|36215 : 210.0) no description available & (reliability: 1098.0) & (original description: Putative At2g28390, Description = At2g28390/T1B3.9, PFAM = PF03164)' T '35.1' 'not assigned.no ontology' 'niben101scf00063_813774-818146' '(at1g18720 : 233.0) Protein of unknown function (DUF962); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF962 (InterPro:IPR009305); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF962) (TAIR:AT1G74440.1); Has 638 Blast hits to 636 proteins in 299 species: Archae - 0; Bacteria - 335; Metazoa - 3; Fungi - 143; Plants - 88; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|38502 : 198.0) no description available & (gnl|cdd|69636 : 151.0) no description available & (reliability: 466.0) & (original description: Putative Sb49, Description = YGL010w-like protein, PFAM = PF06127)' T '35.1' 'not assigned.no ontology' 'niben101scf00066_227012-230572' '(at5g59480 : 342.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyrimidine 5-nucleotidase (InterPro:IPR010237), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G02230.2); Has 2207 Blast hits to 2204 proteins in 462 species: Archae - 6; Bacteria - 693; Metazoa - 0; Fungi - 141; Plants - 199; Viruses - 0; Other Eukaryotes - 1168 (source: NCBI BLink). & (gnl|cdd|38319 : 300.0) no description available & (gnl|cdd|31215 : 86.1) no description available & (reliability: 684.0) & (original description: Putative nod33, Description = Haloacid dehalogenase-like hydrolase, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00069_1025523-1028395' '(at5g09620 : 116.0) Octicosapeptide/Phox/Bem1p family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT5G64430.1); Has 18668 Blast hits to 11149 proteins in 562 species: Archae - 0; Bacteria - 597; Metazoa - 7421; Fungi - 2059; Plants - 1927; Viruses - 138; Other Eukaryotes - 6526 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative At2g01190, Description = Serine/threonine-protein kinase CTR1, PFAM = PF00564)' T '35.1' 'not assigned.no ontology' 'niben101scf00072_956645-965039' '(at1g65320 : 499.0) Cystathionine beta-synthase (CBS) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein (TAIR:AT5G53750.1); Has 145 Blast hits to 144 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|36975 : 134.0) no description available & (reliability: 998.0) & (original description: Putative CBSX6, Description = CBS domain-containing protein CBSX6, PFAM = PF00571)' T '35.1' 'not assigned.no ontology' 'niben101scf00083_140477-153192' '(at1g61900 : 422.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30700.1). & (reliability: 844.0) & (original description: Putative At1g61900, Description = Uncharacterized GPI-anchored protein At1g61900, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00085_129168-133509' '(at3g44510 : 364.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, root; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G08310.1). & (reliability: 686.0) & (original description: Putative At1g08310, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'niben101scf00085_207479-213371' '(at3g44510 : 373.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, root; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G08310.1). & (reliability: 684.0) & (original description: Putative At3g44510, Description = Alpha/beta-hydrolases family protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf00088_62800-65756' '(at5g14980 : 332.0) alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G19290.1); Has 3141 Blast hits to 3138 proteins in 1076 species: Archae - 24; Bacteria - 2044; Metazoa - 145; Fungi - 150; Plants - 435; Viruses - 33; Other Eukaryotes - 310 (source: NCBI BLink). & (gnl|cdd|36668 : 319.0) no description available & (gnl|cdd|32448 : 136.0) no description available & (reliability: 664.0) & (original description: Putative At5g19290, Description = Esterase/lipase/thioesterase family protein, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'niben101scf00096_268309-270800' '(at2g42140 : 84.7) VQ motif-containing protein; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT3G58000.1); Has 70 Blast hits to 70 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative VQ18, Description = AtVQ18, PFAM = PF05678)' T '35.1' 'not assigned.no ontology' 'niben101scf00104_347655-354471' '(at1g03070 : 350.0) Bax inhibitor-1 family protein; FUNCTIONS IN: glutamate binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Inhibitor of apoptosis-promoting Bax1 related (InterPro:IPR006214); BEST Arabidopsis thaliana protein match is: Bax inhibitor-1 family protein (TAIR:AT4G02690.1). & (gnl|cdd|37533 : 204.0) no description available & (reliability: 700.0) & (original description: Putative At4g15470, Description = BI1-like protein, PFAM = PF01027)' T '35.1' 'not assigned.no ontology' 'niben101scf00108_269500-276569' '(at4g29540 : 360.0) bacterial transferase hexapeptide repeat-containing protein; FUNCTIONS IN: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity, transferase activity; INVOLVED IN: lipid biosynthetic process; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (InterPro:IPR010137); BEST Arabidopsis thaliana protein match is: Trimeric LpxA-like enzymes superfamily protein (TAIR:AT4G05210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81502 : 297.0) no description available & (reliability: 720.0) & (original description: Putative LPXA, Description = Probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, mitochondrial, PFAM = PF00132;PF00132;PF00132;PF13720)' T '35.1' 'not assigned.no ontology' 'niben101scf00109_30089-34629' '(at3g26780 : 461.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: N-terminal protein myristoylation, metabolic process; LOCATED IN: cytosol, mitochondrion; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Uncharacterised conserved protein UCP036920, phosphoglycerate mutase, plant X4/Y4 (InterPro:IPR017070); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G12850.1); Has 3099 Blast hits to 3054 proteins in 1059 species: Archae - 8; Bacteria - 2226; Metazoa - 233; Fungi - 43; Plants - 144; Viruses - 0; Other Eukaryotes - 445 (source: NCBI BLink). & (gnl|cdd|35455 : 223.0) no description available & (gnl|cdd|84677 : 81.3) no description available & (reliability: 922.0) & (original description: Putative XY4, Description = Putative fructose-2,6-bisphosphatase, PFAM = PF00300)' T '35.1' 'not assigned.no ontology' 'niben101scf00109_877028-885925' '(at3g27120 : 587.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Vps4 oligomerisation, C-terminal (InterPro:IPR015415); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27130.1); Has 33109 Blast hits to 30842 proteins in 3139 species: Archae - 1459; Bacteria - 13342; Metazoa - 4781; Fungi - 3652; Plants - 2738; Viruses - 26; Other Eukaryotes - 7111 (source: NCBI BLink). & (gnl|cdd|35959 : 373.0) no description available & (gnl|cdd|30812 : 233.0) no description available & (q96372|cdc48_capan : 137.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 1174.0) & (original description: Putative FIGNL1, Description = Chromosome undetermined SCAF9347, whole genome shotgun sequence, PFAM = PF00004;PF09336)' T '35.1' 'not assigned.no ontology' 'niben101scf00109_1017947-1034480' '(at3g01920 : 382.0) DHBP synthase RibB-like alpha/beta domain; CONTAINS InterPro DOMAIN/s: Sua5/YciO/YrdC/YwlC (InterPro:IPR004388), DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945), Sua5/YciO/YrdC, N-terminal (InterPro:IPR006070); Has 7227 Blast hits to 7227 proteins in 2277 species: Archae - 193; Bacteria - 5396; Metazoa - 127; Fungi - 76; Plants - 77; Viruses - 0; Other Eukaryotes - 1358 (source: NCBI BLink). & (gnl|cdd|38261 : 139.0) no description available & (gnl|cdd|30359 : 138.0) no description available & (reliability: 764.0) & (original description: Putative CPL11, Description = Translation factor, PFAM = PF01300)' T '35.1' 'not assigned.no ontology' 'niben101scf00111_502257-503806' '(at3g12400 : 210.0) Mutants of this gene were initially identified because of the trichome morphogenesis phenotype. Those trichomes have multiple nuclei, a defect that turns out not to be restricted to the trichomes but also in all endoreduplicating cell types. This gene encodes a ubiquitin-binding protein with sequence similarities with yeast proteins that are components of the ESCRTI-III complexes. The Arabidopsis protein is found associated with the endosome.; ELC; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Tumour susceptibility gene 101 (InterPro:IPR008883), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), Steadiness box (InterPro:IPR017916); BEST Arabidopsis thaliana protein match is: ELCH-like (TAIR:AT5G13860.1); Has 587 Blast hits to 537 proteins in 178 species: Archae - 0; Bacteria - 3; Metazoa - 278; Fungi - 177; Plants - 63; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|37602 : 179.0) no description available & (gnl|cdd|86940 : 129.0) no description available & (reliability: 410.0) & (original description: Putative ELC, Description = Protein ELC, PFAM = PF05743)' T '35.1' 'not assigned.no ontology' 'niben101scf00113_435166-437764' '(at2g13450 : 80.9) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02000.1); Has 247 Blast hits to 243 proteins in 13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 243; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative , Description = , PFAM = PF14111;PF14392)' T '35.1' 'not assigned.no ontology' 'niben101scf00116_314198-317436' '(at4g05150 : 241.0) Octicosapeptide/Phox/Bem1p family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT2G01190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative At4g05150, Description = AT4g05150/C17L7_70, PFAM = PF00564)' T '35.1' 'not assigned.no ontology' 'niben101scf00120_187248-193864' '(at4g27460 : 260.0) Cystathionine beta-synthase (CBS) family protein; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein (TAIR:AT5G53750.1); Has 145 Blast hits to 145 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 520.0) & (original description: Putative CBSX5, Description = CBS domain CBSX5-like protein, PFAM = PF00571)' T '35.1' 'not assigned.no ontology' 'niben101scf00128_285922-291548' '(at1g59650 : 478.0) Encodes CW14.; CW14; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT1G10410.1); Has 261 Blast hits to 261 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|70520 : 262.0) no description available & (reliability: 956.0) & (original description: Putative CW14, Description = AT3G29180 protein, PFAM = PF07059)' T '35.1' 'not assigned.no ontology' 'niben101scf00130_148482-152524' '(at1g17070 : 593.0) GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tuftelin interacting protein N-terminal (InterPro:IPR022159), D111/G-patch (InterPro:IPR000467); BEST Arabidopsis thaliana protein match is: GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain (TAIR:AT2G42330.2); Has 1264 Blast hits to 1232 proteins in 250 species: Archae - 2; Bacteria - 6; Metazoa - 735; Fungi - 146; Plants - 190; Viruses - 1; Other Eukaryotes - 184 (source: NCBI BLink). & (gnl|cdd|37395 : 400.0) no description available & (gnl|cdd|72121 : 245.0) no description available & (reliability: 1186.0) & (original description: Putative STIPL1, Description = Tuftelin-interacting protein 11, PFAM = PF07842;PF01585;PF12457)' T '35.1' 'not assigned.no ontology' 'niben101scf00130_148677-153347' '(at1g17070 : 280.0) GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tuftelin interacting protein N-terminal (InterPro:IPR022159), D111/G-patch (InterPro:IPR000467); BEST Arabidopsis thaliana protein match is: GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain (TAIR:AT2G42330.2); Has 1264 Blast hits to 1232 proteins in 250 species: Archae - 2; Bacteria - 6; Metazoa - 735; Fungi - 146; Plants - 190; Viruses - 1; Other Eukaryotes - 184 (source: NCBI BLink). & (gnl|cdd|37395 : 163.0) no description available & (reliability: 560.0) & (original description: Putative STIPL1, Description = Tuftelin-interacting protein 11, PFAM = PF12457;PF01585)' T '35.1' 'not assigned.no ontology' 'niben101scf00143_319998-333075' '(at1g33980 : 246.0) Involved in mRNA surveillance, detects exported mRNAs with truncated open reading frames and initiates nonsense-mediated mRNA decay (NMD); UPF3; FUNCTIONS IN: nucleotide binding; INVOLVED IN: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Regulator of nonsense-mediated decay, UPF3 (InterPro:IPR005120); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67104 : 155.0) no description available & (gnl|cdd|36509 : 90.9) no description available & (reliability: 492.0) & (original description: Putative UPF3, Description = Regulator of nonsense transcripts UPF3, PFAM = PF03467)' T '35.1' 'not assigned.no ontology' 'niben101scf00143_349777-353216' '(at5g49920 : 166.0) Octicosapeptide/Phox/Bem1p family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT3G46920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative STY2, Description = Phox/Bem1p, PFAM = PF00564)' T '35.1' 'not assigned.no ontology' 'niben101scf00149_16765-31591' '(at5g01460 : 667.0) LMBR1-like membrane protein; CONTAINS InterPro DOMAIN/s: LMBR1-like membrane protein, conserved region (InterPro:IPR006876); BEST Arabidopsis thaliana protein match is: LMBR1-like membrane protein (TAIR:AT3G08930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86725 : 268.0) no description available & (reliability: 1334.0) & (original description: Putative At3g08930, Description = LIMR family protein At3g08930, PFAM = PF04791)' T '35.1' 'not assigned.no ontology' 'niben101scf00151_532706-546797' '(at5g19820 : 1051.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37382 : 693.0) no description available & (reliability: 2102.0) & (original description: Putative emb2734, Description = Protein EMBRYO DEFECTIVE 2734, PFAM = PF00514;PF13646;PF02985)' T '35.1' 'not assigned.no ontology' 'niben101scf00161_134975-138811' '(at4g25040 : 85.1) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT4G03540.1); Has 574 Blast hits to 574 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 574; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68120 : 83.9) no description available & (reliability: 170.2) & (original description: Putative VIT_17s0000g00560, Description = CASP-like protein 1F1, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf00161_171719-178384' '(at1g73480 : 445.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G18360.1); Has 6390 Blast hits to 6380 proteins in 1730 species: Archae - 36; Bacteria - 4672; Metazoa - 140; Fungi - 153; Plants - 452; Viruses - 63; Other Eukaryotes - 874 (source: NCBI BLink). & (gnl|cdd|36668 : 333.0) no description available & (gnl|cdd|32448 : 165.0) no description available & (reliability: 890.0) & (original description: Putative CSE16, Description = Caffeoyl shikimate esterase 16, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'niben101scf00161_442537-454309' '(at5g50530 : 581.0) CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein (TAIR:AT5G50640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73087 : 145.0) no description available & (reliability: 1162.0) & (original description: Putative CBSCBSPB4, Description = CBS domain-containing protein CBSCBSPB4, PFAM = PF00564;PF00571;PF00571;PF00571;PF00571)' T '35.1' 'not assigned.no ontology' 'niben101scf00165_13881-19842' '(at2g27285 : 179.0) Coiled-coil domain-containing protein 55 (DUF2040); EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2040, coiled-coil (InterPro:IPR018612); BEST Arabidopsis thaliana protein match is: Coiled-coil domain-containing protein 55 (DUF2040) (TAIR:AT2G27280.1); Has 40028 Blast hits to 25465 proteins in 1773 species: Archae - 338; Bacteria - 5536; Metazoa - 16890; Fungi - 2992; Plants - 1451; Viruses - 173; Other Eukaryotes - 12648 (source: NCBI BLink). & (gnl|cdd|37328 : 125.0) no description available & (reliability: 358.0) & (original description: Putative At2g27280, Description = Coiled-coil domain-containing protein 55 (DUF2040), PFAM = PF09745)' T '35.1' 'not assigned.no ontology' 'niben101scf00167_334798-344952' '(at3g27090 : 385.0) DCD (Development and Cell Death) domain protein; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G42050.1); Has 746 Blast hits to 671 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 441 (source: NCBI BLink). & (p37707|b2_dauca : 273.0) B2 protein - Daucus carota (Carrot) & (reliability: 770.0) & (original description: Putative , Description = DCD (Development and cell death) domain protein, PFAM = PF10539)' T '35.1' 'not assigned.no ontology' 'niben101scf00170_537976-544471' '(at5g60050 : 517.0) BTB/POZ domain-containing protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G63850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1034.0) & (original description: Putative At1g63850, Description = BTB/POZ domain-containing protein At1g63850, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00170_636941-642974' '(at1g07850 : 613.0) Protein of unknown function (DUF604); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT4G23490.1); Has 101 Blast hits to 95 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 16; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68226 : 428.0) no description available & (gnl|cdd|37457 : 291.0) no description available & (reliability: 1226.0) & (original description: Putative GT31C5, Description = Glycosyltransferase-like protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben101scf00173_470629-473363' '(at2g36300 : 285.0) Integral membrane Yip1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Yip1 domain (InterPro:IPR006977); BEST Arabidopsis thaliana protein match is: Integral membrane Yip1 family protein (TAIR:AT3G52760.1); Has 658 Blast hits to 658 proteins in 200 species: Archae - 0; Bacteria - 0; Metazoa - 333; Fungi - 123; Plants - 111; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|38313 : 208.0) no description available & (gnl|cdd|34684 : 109.0) no description available & (reliability: 570.0) & (original description: Putative PGSC0003DMG400019486, Description = Protein YIPF, PFAM = PF04893)' T '35.1' 'not assigned.no ontology' 'niben101scf00173_511081-521374' '(at2g36290 : 402.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G74300.1); Has 970 Blast hits to 968 proteins in 224 species: Archae - 20; Bacteria - 476; Metazoa - 0; Fungi - 77; Plants - 313; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (reliability: 804.0) & (original description: Putative umc2763, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf00176_903305-909047' '(at1g61780 : 144.0) postsynaptic protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Microtubule-associated protein CRIPT (InterPro:IPR019367); Has 230 Blast hits to 228 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 46; Plants - 56; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|38686 : 123.0) no description available & (reliability: 288.0) & (original description: Putative Cript, Description = Cysteine-rich PDZ-binding protein, PFAM = PF10235)' T '35.1' 'not assigned.no ontology' 'niben101scf00180_577804-591420' '(at1g61150 : 333.0) LisH and RanBPM domains containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein, CRA domain (InterPro:IPR019589), CTLH, C-terminal LisH motif (InterPro:IPR006595), Ran binding protein-like, CRA domain (InterPro:IPR013144); BEST Arabidopsis thaliana protein match is: LisH and RanBPM domains containing protein (TAIR:AT4G09300.1); Has 726 Blast hits to 711 proteins in 198 species: Archae - 0; Bacteria - 50; Metazoa - 282; Fungi - 123; Plants - 213; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|37870 : 239.0) no description available & (reliability: 666.0) & (original description: Putative GID8, Description = Glucose-induced degradation protein 8 homolog, PFAM = PF08513;PF10607)' T '35.1' 'not assigned.no ontology' 'niben101scf00182_297229-321063' '(at2g26590 : 348.0) regulatory particle non-ATPase 13 (RPN13); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell adhesion; LOCATED IN: integral to membrane, nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 26S proteasome complex ubiquitin receptor, subunit Rpn13 (InterPro:IPR006773); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38247 : 229.0) no description available & (gnl|cdd|68261 : 228.0) no description available & (reliability: 696.0) & (original description: Putative RPN13, Description = 26S proteasome regulatory subunit RPN13, PFAM = PF16550;PF04683)' T '35.1' 'not assigned.no ontology' 'niben101scf00188_73198-81163' '(at1g15490 : 757.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G80280.1); Has 5830 Blast hits to 5818 proteins in 1057 species: Archae - 56; Bacteria - 4179; Metazoa - 223; Fungi - 71; Plants - 420; Viruses - 1; Other Eukaryotes - 880 (source: NCBI BLink). & (gnl|cdd|36667 : 186.0) no description available & (gnl|cdd|30941 : 96.3) no description available & (reliability: 1514.0) & (original description: Putative BnaC02g23220D, Description = BnaC02g23220D protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf00199_371548-389844' '(at3g63460 : 1259.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G18830.1). & (gnl|cdd|35528 : 843.0) no description available & (gnl|cdd|29257 : 108.0) no description available & (reliability: 2518.0) & (original description: Putative SEC31B, Description = Protein transport protein SEC31 homolog B, PFAM = PF12931;PF07304)' T '35.1' 'not assigned.no ontology' 'niben101scf00199_460304-463593' '(gnl|cdd|66174 : 237.0) no description available & (at3g26040 : 204.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 2415 Blast hits to 2403 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 2353; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (o24645|hcbt1_diaca : 92.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 408.0) & (original description: Putative acyl3a, Description = Acyltransferase-like protein, PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'niben101scf00202_181609-186506' '(at2g16365 : 80.5) F-box family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G16300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'niben101scf00211_1-10231' '(gnl|cdd|36844 : 227.0) no description available & (at2g16595 : 226.0) Translocon-associated protein (TRAP), alpha subunit; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translocon-associated protein (TRAP), alpha subunit (InterPro:IPR005595); BEST Arabidopsis thaliana protein match is: Translocon-associated protein (TRAP), alpha subunit (TAIR:AT2G21160.1); Has 245 Blast hits to 245 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 29; Plants - 60; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|67507 : 87.8) no description available & (reliability: 452.0) & (original description: Putative tap1, Description = Translocon-associated protein (TRAP), alpha subunit, PFAM = PF03896)' T '35.1' 'not assigned.no ontology' 'niben101scf00215_227637-234056' '(at5g21090 : 307.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G43740.1); Has 79109 Blast hits to 18390 proteins in 732 species: Archae - 33; Bacteria - 1866; Metazoa - 5774; Fungi - 472; Plants - 66918; Viruses - 0; Other Eukaryotes - 4046 (source: NCBI BLink). & (p93194|rpk1_iponi : 94.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 614.0) & (original description: Putative LRP, Description = LRR protein, PFAM = PF13855;PF08263;PF00560)' T '35.1' 'not assigned.no ontology' 'niben101scf00217_277113-279580' '(at5g55110 : 120.0) Stigma-specific Stig1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Stigma-specific protein Stig1 (InterPro:IPR006969); BEST Arabidopsis thaliana protein match is: Stigma-specific Stig1 family protein (TAIR:AT4G26880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68459 : 96.2) no description available & (reliability: 240.0) & (original description: Putative At1g50720, Description = Stigma-specific STIG1-like protein 3, PFAM = PF04885)' T '35.1' 'not assigned.no ontology' 'niben101scf00219_424117-427937' '(at2g26490 : 526.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G34380.1); Has 38085 Blast hits to 18995 proteins in 635 species: Archae - 34; Bacteria - 5266; Metazoa - 14476; Fungi - 8827; Plants - 4594; Viruses - 0; Other Eukaryotes - 4888 (source: NCBI BLink). & (gnl|cdd|29257 : 142.0) no description available & (gnl|cdd|35495 : 90.1) no description available & (reliability: 1052.0) & (original description: Putative wdrp, Description = Myosin heavy chain kinase B, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf00219_731399-738423' '(at5g42960 : 270.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G45170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 534.0) & (original description: Putative OEP24B, Description = Outer envelope pore protein 24B, chloroplastic, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00220_288643-298352' '(at1g52200 : 209.0) PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT3G18450.1); Has 632 Blast hits to 631 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 75; Plants - 516; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86720 : 110.0) no description available & (reliability: 418.0) & (original description: Putative PCR6, Description = PLAC8 family protein, PFAM = PF04749)' T '35.1' 'not assigned.no ontology' 'niben101scf00225_467098-469742' '(at5g53730 : 219.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT3G44220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70773 : 145.0) no description available & (reliability: 438.0) & (original description: Putative HIN1, Description = NHL-like protein, PFAM = PF03168)' T '35.1' 'not assigned.no ontology' 'niben101scf00229_160286-164705' '(at5g02230 : 386.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Pyrimidine 5-nucleotidase (InterPro:IPR010237), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G59480.1); Has 2249 Blast hits to 2246 proteins in 493 species: Archae - 16; Bacteria - 743; Metazoa - 0; Fungi - 143; Plants - 201; Viruses - 0; Other Eukaryotes - 1146 (source: NCBI BLink). & (gnl|cdd|38319 : 305.0) no description available & (reliability: 772.0) & (original description: Putative nod33, Description = Putative phosphatase, PFAM = PF13419)' T '35.1' 'not assigned.no ontology' 'niben101scf00231_798858-810251' '(at1g10600 : 212.0) associated molecule with the SH3 domain of STAM 2 (AMSH2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: associated molecule with the SH3 domain of STAM 3 (TAIR:AT4G16144.1); Has 1117 Blast hits to 1115 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 409; Fungi - 306; Plants - 280; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|38091 : 191.0) no description available & (reliability: 424.0) & (original description: Putative AMSH1, Description = AMSH-like ubiquitin thioesterase 1, PFAM = PF01398)' T '35.1' 'not assigned.no ontology' 'niben101scf00233_179604-192374' '(at4g14305 : 283.0) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT4G04470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37155 : 105.0) no description available & (reliability: 566.0) & (original description: Putative PMP22, Description = Peroxisomal membrane protein PMP22, PFAM = PF04117)' T '35.1' 'not assigned.no ontology' 'niben101scf00236_219705-233266' '(at2g26060 : 397.0) embryo defective 1345 (emb1345); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G32990.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35864 : 354.0) no description available & (gnl|cdd|29257 : 166.0) no description available & (reliability: 794.0) & (original description: Putative ciao1, Description = Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf00244_315049-318459' '(at3g08640 : 368.0) Protein of unknown function (DUF3411); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3411) (TAIR:AT3G08630.1); Has 11715 Blast hits to 4977 proteins in 490 species: Archae - 4; Bacteria - 2620; Metazoa - 4563; Fungi - 550; Plants - 2459; Viruses - 100; Other Eukaryotes - 1419 (source: NCBI BLink). & (reliability: 736.0) & (original description: Putative Sb06g031280, Description = Putative uncharacterized protein Sb06g031280, PFAM = PF11891)' T '35.1' 'not assigned.no ontology' 'niben101scf00247_70956-77406' '(at4g02940 : 444.0) oxidoreductase, 2OG-Fe(II) oxygenase family protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to karrikin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT2G48080.1); Has 217 Blast hits to 213 proteins in 52 species: Archae - 0; Bacteria - 14; Metazoa - 24; Fungi - 16; Plants - 131; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|39378 : 218.0) no description available & (reliability: 888.0) & (original description: Putative Sb09g019740, Description = Putative uncharacterized protein Sb09g019740, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00247_177199-180419' '(at1g03440 : 535.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT4G03010.1); Has 51202 Blast hits to 18238 proteins in 817 species: Archae - 16; Bacteria - 1653; Metazoa - 5878; Fungi - 321; Plants - 40223; Viruses - 0; Other Eukaryotes - 3111 (source: NCBI BLink). & (p93194|rpk1_iponi : 96.3) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1070.0) & (original description: Putative At1g03440, Description = Protein kinase (F21B7.6) like protein, PFAM = PF13516;PF13516;PF13516;PF08263)' T '35.1' 'not assigned.no ontology' 'niben101scf00247_177253-179794' '(at1g03440 : 237.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT4G03010.1); Has 51202 Blast hits to 18238 proteins in 817 species: Archae - 16; Bacteria - 1653; Metazoa - 5878; Fungi - 321; Plants - 40223; Viruses - 0; Other Eukaryotes - 3111 (source: NCBI BLink). & (reliability: 474.0) & (original description: Putative At1g03440, Description = Putative ovule protein, PFAM = PF08263;PF13855)' T '35.1' 'not assigned.no ontology' 'niben101scf00247_338396-344458' '(at3g63000 : 590.0) NPL4-like protein 1 (NPL41); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NPL4 (InterPro:IPR007717); BEST Arabidopsis thaliana protein match is: Nuclear pore localisation protein NPL4 (TAIR:AT2G47970.1); Has 398 Blast hits to 398 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 128; Fungi - 123; Plants - 67; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (q9as33|npl4_orysa : 435.0) NPL4-like protein - Oryza sativa (Rice) & (gnl|cdd|38045 : 351.0) no description available & (gnl|cdd|86777 : 259.0) no description available & (reliability: 1180.0) & (original description: Putative At3g63000, Description = NPL4-like protein 1, PFAM = PF05021;PF11543)' T '35.1' 'not assigned.no ontology' 'niben101scf00249_167066-171614' '(at1g74300 : 404.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G74280.1); Has 1098 Blast hits to 1097 proteins in 261 species: Archae - 18; Bacteria - 573; Metazoa - 24; Fungi - 62; Plants - 313; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (reliability: 808.0) & (original description: Putative At2g36290, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf00251_73663-93946' '(at5g43745 : 984.0) Protein of unknown function (DUF1012); LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1012 (InterPro:IPR010420); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1012) (TAIR:AT5G02940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69746 : 268.0) no description available & (q5h8a6|casto_lotja : 178.0) Putative ion channel CASTOR, chloroplast precursor - Lotus japonicus & (reliability: 1968.0) & (original description: Putative At5g43745, Description = Putative ion channel POLLUX-like 2, PFAM = PF06241)' T '35.1' 'not assigned.no ontology' 'niben101scf00257_15847-27611' '(at2g30630 : 735.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cell killing; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, flower, pollen tube; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zeta toxin (InterPro:IPR010488); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G06750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1470.0) & (original description: Putative BnaC04g13840D, Description = BnaC04g13840D protein, PFAM = PF06414)' T '35.1' 'not assigned.no ontology' 'niben101scf00257_151954-201950' '(at4g32560 : 139.0) paramyosin-related; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37912 : 89.7) no description available & (reliability: 278.0) & (original description: Putative At4g32560, Description = Putative coiled-coil domain-containing protein 93-like, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00257_301017-328067' '(at2g25320 : 2211.0) TRAF-like family protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT2G25330.1); Has 73652 Blast hits to 40883 proteins in 2342 species: Archae - 900; Bacteria - 9328; Metazoa - 35691; Fungi - 5783; Plants - 4303; Viruses - 204; Other Eukaryotes - 17443 (source: NCBI BLink). & (gnl|cdd|37198 : 119.0) no description available & (gnl|cdd|58100 : 100.0) no description available & (reliability: 4422.0) & (original description: Putative CMS1, Description = CGS1 mRNA stability 1, PFAM = PF00917;PF00917;PF00917)' T '35.1' 'not assigned.no ontology' 'niben101scf00257_302921-307721' '(at2g25320 : 451.0) TRAF-like family protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT2G25330.1); Has 73652 Blast hits to 40883 proteins in 2342 species: Archae - 900; Bacteria - 9328; Metazoa - 35691; Fungi - 5783; Plants - 4303; Viruses - 204; Other Eukaryotes - 17443 (source: NCBI BLink). & (reliability: 902.0) & (original description: Putative CMS1, Description = Ubiquitin carboxyl-terminal hydrolase 13, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00263_122560-134479' '(at1g56440 : 354.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: translocon at the outer membrane of chloroplasts 64-III (TAIR:AT3G17970.1). & (gnl|cdd|39847 : 181.0) no description available & (reliability: 708.0) & (original description: Putative BnaA09g16010D, Description = BnaA09g16010D protein, PFAM = PF00515;PF00515;PF13877)' T '35.1' 'not assigned.no ontology' 'niben101scf00268_272254-280028' '(at3g07720 : 470.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: nitrile specifier protein 5 (TAIR:AT5G48180.1); Has 10920 Blast hits to 5857 proteins in 349 species: Archae - 8; Bacteria - 366; Metazoa - 5368; Fungi - 1057; Plants - 2178; Viruses - 16; Other Eukaryotes - 1927 (source: NCBI BLink). & (gnl|cdd|35600 : 261.0) no description available & (q39610|dyha_chlre : 80.1) Dynein alpha chain, flagellar outer arm (DHC alpha) - Chlamydomonas reinhardtii & (reliability: 940.0) & (original description: Putative ESP, Description = Epithiospecifier protein, PFAM = PF13854;PF13854;PF13418;PF13418;PF13418;PF13418;PF01344;PF01344;PF01344;PF01344;PF01344;PF01344)' T '35.1' 'not assigned.no ontology' 'niben101scf00271_233376-261631' '(at5g45170 : 299.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT3G48420.1); Has 352 Blast hits to 346 proteins in 109 species: Archae - 0; Bacteria - 170; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 598.0) & (original description: Putative At5g45170, Description = At5g45170, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00271_845706-848611' '(at5g44550 : 177.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT4G20390.1); Has 554 Blast hits to 554 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 554; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68120 : 115.0) no description available & (reliability: 354.0) & (original description: Putative POPTRDRAFT_798217, Description = CASP-like protein 1B2, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf00272_1011106-1017348' '(at1g14310 : 329.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity, phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), HAD-superfamily hydrolase, subfamily IA, REG-2-like (InterPro:IPR011949), HAD-superfamily hydrolase, subfamily IA, variant 1 (InterPro:IPR006439); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G41250.1); Has 5555 Blast hits to 5555 proteins in 1508 species: Archae - 313; Bacteria - 4016; Metazoa - 183; Fungi - 73; Plants - 110; Viruses - 0; Other Eukaryotes - 860 (source: NCBI BLink). & (gnl|cdd|38295 : 138.0) no description available & (gnl|cdd|31215 : 96.5) no description available & (reliability: 658.0) & (original description: Putative pco077559a, Description = HAD-superfamily hydrolase, subfamily IA, variant 1, PFAM = PF13419)' T '35.1' 'not assigned.no ontology' 'niben101scf00272_1037531-1043194' '(at1g69680 : 261.0) Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein; CONTAINS InterPro DOMAIN/s: Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Ran-interacting Mog1 protein (InterPro:IPR007681), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); Has 275 Blast hits to 275 proteins in 139 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 115; Plants - 49; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|38539 : 165.0) no description available & (gnl|cdd|29276 : 162.0) no description available & (reliability: 522.0) & (original description: Putative , Description = , PFAM = PF04603)' T '35.1' 'not assigned.no ontology' 'niben101scf00272_1184374-1187081' '(at2g02880 : 151.0) mucin-related; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62270.1); Has 128 Blast hits to 128 proteins in 36 species: Archae - 0; Bacteria - 3; Metazoa - 3; Fungi - 6; Plants - 91; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative , Description = Mucin-like protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00280_317683-326527' '(at4g34280 : 594.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: U2A'/phosphoprotein 32 family A, C-terminal (InterPro:IPR003603), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G61210.2); Has 5718 Blast hits to 4596 proteins in 341 species: Archae - 5; Bacteria - 811; Metazoa - 2365; Fungi - 1046; Plants - 644; Viruses - 0; Other Eukaryotes - 847 (source: NCBI BLink). & (gnl|cdd|35485 : 88.8) no description available & (reliability: 1188.0) & (original description: Putative At4g34280, Description = At4g34280, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00286_377281-392635' '(at1g04280 : 558.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cell killing; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Zeta toxin (InterPro:IPR010488); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G06750.2); Has 195 Blast hits to 194 proteins in 47 species: Archae - 0; Bacteria - 42; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 3; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 1052.0) & (original description: Putative At1g04280, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF06414)' T '35.1' 'not assigned.no ontology' 'niben101scf00286_431113-434591' '(at2g03820 : 697.0) nonsense-mediated mRNA decay NMD3 family protein; CONTAINS InterPro DOMAIN/s: NMD3 (InterPro:IPR007064); Has 480 Blast hits to 466 proteins in 217 species: Archae - 17; Bacteria - 0; Metazoa - 145; Fungi - 138; Plants - 63; Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink). & (gnl|cdd|37824 : 632.0) no description available & (gnl|cdd|86761 : 236.0) no description available & (reliability: 1394.0) & (original description: Putative nmd3, Description = 60S ribosomal export protein NMD3, PFAM = PF04981)' T '35.1' 'not assigned.no ontology' 'niben101scf00286_433436-445059' '(at4g14500 : 558.0) Polyketide cyclase/dehydrase and lipid transport superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT3G23080.1); Has 214 Blast hits to 213 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 0; Plants - 165; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|37972 : 248.0) no description available & (gnl|cdd|29139 : 129.0) no description available & (reliability: 1116.0) & (original description: Putative dl3290w, Description = Putative uncharacterized protein AT4g14500, PFAM = PF01852)' T '35.1' 'not assigned.no ontology' 'niben101scf00290_194751-199609' '(at5g12460 : 400.0) Protein of unknown function (DUF604); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT2G37730.1); Has 562 Blast hits to 553 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 108; Fungi - 170; Plants - 273; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|68226 : 244.0) no description available & (gnl|cdd|37457 : 169.0) no description available & (reliability: 800.0) & (original description: Putative BnaA10g29930D, Description = BnaA10g29930D protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben101scf00294_122622-139027' '(at3g53390 : 745.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G37160.1); Has 13890 Blast hits to 8004 proteins in 489 species: Archae - 30; Bacteria - 3923; Metazoa - 4011; Fungi - 2926; Plants - 1297; Viruses - 0; Other Eukaryotes - 1703 (source: NCBI BLink). & (gnl|cdd|37605 : 485.0) no description available & (gnl|cdd|29257 : 81.2) no description available & (reliability: 1490.0) & (original description: Putative At2g37160, Description = Transducin/WD-40 repeat-containing protein, PFAM = PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf00302_229204-233055' '(at5g01650 : 214.0) Tautomerase/MIF superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: inflammatory response, response to other organism; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tautomerase (InterPro:IPR014347), Macrophage migration inhibitory factor (InterPro:IPR001398); BEST Arabidopsis thaliana protein match is: Tautomerase/MIF superfamily protein (TAIR:AT5G57170.2); Has 820 Blast hits to 820 proteins in 207 species: Archae - 0; Bacteria - 141; Metazoa - 384; Fungi - 26; Plants - 141; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|36970 : 133.0) no description available & (reliability: 428.0) & (original description: Putative At5g01650, Description = Macrophage migration inhibitory factor family protein, PFAM = PF01187)' T '35.1' 'not assigned.no ontology' 'niben101scf00303_17021-22113' '(at5g47540 : 201.0) Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT4G17270.1); Has 570 Blast hits to 568 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 142; Plants - 154; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|36779 : 163.0) no description available & (gnl|cdd|87570 : 161.0) no description available & (reliability: 368.0) & (original description: Putative hymA, Description = Conidiophore development protein hymA, PFAM = PF08569)' T '35.1' 'not assigned.no ontology' 'niben101scf00305_495799-501202' '(at4g36530 : 374.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G19850.1); Has 21771 Blast hits to 21766 proteins in 2265 species: Archae - 246; Bacteria - 15770; Metazoa - 624; Fungi - 315; Plants - 912; Viruses - 5; Other Eukaryotes - 3899 (source: NCBI BLink). & (gnl|cdd|36667 : 155.0) no description available & (gnl|cdd|30941 : 97.9) no description available & (reliability: 748.0) & (original description: Putative PGSC0003DMG400037138, Description = Hydrolase, alpha/beta fold family protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf00307_273142-283496' '(at1g25375 : 560.0) Metallo-hydrolase/oxidoreductase superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); Has 5673 Blast hits to 5670 proteins in 1426 species: Archae - 148; Bacteria - 3668; Metazoa - 137; Fungi - 138; Plants - 124; Viruses - 0; Other Eukaryotes - 1458 (source: NCBI BLink). & (gnl|cdd|36031 : 129.0) no description available & (gnl|cdd|30837 : 89.1) no description available & (reliability: 1120.0) & (original description: Putative At1g25375, Description = Metallo-hydrolase/oxidoreductase superfamily protein, PFAM = PF00753)' T '35.1' 'not assigned.no ontology' 'niben101scf00313_868434-878802' '(at2g04560 : 489.0) transferases, transferring glycosyl groups; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid A biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 19 (InterPro:IPR003835); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80456 : 305.0) no description available & (reliability: 978.0) & (original description: Putative LPXB, Description = Probable lipid-A-disaccharide synthase, mitochondrial, PFAM = PF02684)' T '35.1' 'not assigned.no ontology' 'niben101scf00313_868549-885481' '(at2g04560 : 397.0) transferases, transferring glycosyl groups; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid A biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 19 (InterPro:IPR003835); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31106 : 244.0) no description available & (reliability: 794.0) & (original description: Putative lpxB, Description = Lipid-A-disaccharide synthase, PFAM = PF02684)' T '35.1' 'not assigned.no ontology' 'niben101scf00314_119097-125215' '(at5g19850 : 520.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G36530.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36667 : 200.0) no description available & (gnl|cdd|30941 : 126.0) no description available & (reliability: 1040.0) & (original description: Putative tlr1393, Description = Tlr1393 protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf00317_11024-18758' '(at4g17370 : 585.0) Oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase, N-terminal (InterPro:IPR000683), Oxidoreductase, C-terminal (InterPro:IPR004104), NAD(P)-binding domain (InterPro:IPR016040); Has 13319 Blast hits to 13319 proteins in 1855 species: Archae - 262; Bacteria - 9244; Metazoa - 179; Fungi - 353; Plants - 43; Viruses - 0; Other Eukaryotes - 3238 (source: NCBI BLink). & (gnl|cdd|37952 : 259.0) no description available & (gnl|cdd|31017 : 158.0) no description available & (reliability: 1170.0) & (original description: Putative yteT, Description = Putative oxidoreductase YteT, PFAM = PF02894;PF01408)' T '35.1' 'not assigned.no ontology' 'niben101scf00317_686346-694996' '(at2g35710 : 663.0) Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process, biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G16600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37161 : 96.0) no description available & (reliability: 1326.0) & (original description: Putative PGSIP8, Description = Putative glucuronosyltransferase PGSIP8, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00318_1036814-1094724' '(at5g05570 : 821.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: methyltransferase activity, nucleotide binding, nucleic acid binding; INVOLVED IN: vesicle-mediated transport, methylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), WD40 repeat, subgroup (InterPro:IPR019781), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G35560.2). & (gnl|cdd|37194 : 169.0) no description available & (reliability: 1642.0) & (original description: Putative BnaAnng01390D, Description = BnaAnng01390D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00321_619719-622321' '(at5g22870 : 136.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G08160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70773 : 119.0) no description available & (reliability: 272.0) & (original description: Putative PGSC0003DMG400024324, Description = Harpin-induced family protein, PFAM = PF03168)' T '35.1' 'not assigned.no ontology' 'niben101scf00324_187208-195764' '(at4g23895 : 204.0) Pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: nucleoside diphosphate kinase activity, ATP binding; INVOLVED IN: UTP biosynthetic process, GTP biosynthetic process, CTP biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Nucleoside diphosphate kinase, core (InterPro:IPR001564), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Nucleoside diphosphate kinase family protein (TAIR:AT4G23900.1). & (reliability: 408.0) & (original description: Putative si618049h06(54), Description = Pleckstrin-like (PH) domain protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00324_289078-291665' '(at4g23930 : 161.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT1G64450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative BnaA09g12240D, Description = BnaA09g12240D protein, PFAM = PF03168)' T '35.1' 'not assigned.no ontology' 'niben101scf00326_55664-63039' '(at4g16380 : 95.9) Heavy metal transport/detoxification superfamily protein ; BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G51090.1); Has 3773 Blast hits to 3325 proteins in 370 species: Archae - 4; Bacteria - 381; Metazoa - 1697; Fungi - 490; Plants - 712; Viruses - 65; Other Eukaryotes - 424 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative BnaA01g17460D, Description = BnaA01g17460D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00338_323820-330431' '(at4g24930 : 196.0) thylakoid lumenal 17.9 kDa protein, chloroplast; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 48 Blast hits to 48 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative At4g24930, Description = Thylakoid lumenal 17.9 kDa protein, chloroplastic, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00338_373466-383621' '(at5g50530 : 580.0) CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein (TAIR:AT5G50640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73087 : 156.0) no description available & (reliability: 1160.0) & (original description: Putative CBSCBSPB2, Description = CBS domain-containing protein CBSCBSPB2, PFAM = PF00571;PF00571;PF00571;PF00571;PF00564)' T '35.1' 'not assigned.no ontology' 'niben101scf00344_422869-431177' '(at1g49880 : 229.0) Erv1/Alr family protein; FUNCTIONS IN: thiol oxidase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ERV/ALR sulphydryl oxidase (InterPro:IPR017905), Erv1/Alr (InterPro:IPR006863); Has 843 Blast hits to 843 proteins in 218 species: Archae - 0; Bacteria - 1; Metazoa - 134; Fungi - 258; Plants - 61; Viruses - 64; Other Eukaryotes - 325 (source: NCBI BLink). & (gnl|cdd|38565 : 164.0) no description available & (gnl|cdd|34659 : 122.0) no description available & (reliability: 458.0) & (original description: Putative ERV1, Description = FAD-linked sulfhydryl oxidase ERV1, PFAM = PF04777)' T '35.1' 'not assigned.no ontology' 'niben101scf00350_390554-394836' '(at1g75260 : 124.0) oxidoreductases, acting on NADH or NADPH; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH; LOCATED IN: chloroplast; Has 10100 Blast hits to 7713 proteins in 844 species: Archae - 18; Bacteria - 1249; Metazoa - 3819; Fungi - 1280; Plants - 459; Viruses - 67; Other Eukaryotes - 3208 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'niben101scf00350_393045-397179' '(at1g47271 : 216.0) Cystathionine beta-synthase (CBS) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT5G10860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73122 : 130.0) no description available & (reliability: 432.0) & (original description: Putative CBSX3, Description = CBS domain-containing protein CBSX3, mitochondrial, PFAM = PF00571;PF00571)' T '35.1' 'not assigned.no ontology' 'niben101scf00367_298911-304766' '(at4g14310 : 725.0) Transducin/WD40 repeat-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: male gametophyte; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046); Has 1761 Blast hits to 1518 proteins in 267 species: Archae - 12; Bacteria - 193; Metazoa - 625; Fungi - 156; Plants - 91; Viruses - 5; Other Eukaryotes - 679 (source: NCBI BLink). & (reliability: 1450.0) & (original description: Putative At4g14310, Description = Transducin/WD40 domain-containing protein-like protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00369_797445-801124' '(gnl|cdd|69288 : 230.0) no description available & (at3g05500 : 219.0) Rubber elongation factor protein (REF); INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rubber elongation factor (InterPro:IPR008802); BEST Arabidopsis thaliana protein match is: Rubber elongation factor protein (REF) (TAIR:AT2G47780.1); Has 129 Blast hits to 129 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q9fra7|y5940_orysa : 198.0) Putative REF/SRPP-like protein Os05g0151300 - Oryza sativa (Rice) & (reliability: 438.0) & (original description: Putative SRP, Description = Stress-related protein, PFAM = PF05755)' T '35.1' 'not assigned.no ontology' 'niben101scf00369_1724281-1727018' '(at1g12650 : 167.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 (InterPro:IPR009292); Has 700 Blast hits to 631 proteins in 192 species: Archae - 0; Bacteria - 32; Metazoa - 138; Fungi - 168; Plants - 60; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). & (gnl|cdd|38400 : 101.0) no description available & (gnl|cdd|87021 : 90.8) no description available & (reliability: 334.0) & (original description: Putative RRP36, Description = Ribosomal RNA processing protein 36, PFAM = PF06102)' T '35.1' 'not assigned.no ontology' 'niben101scf00370_522773-529035' '(at5g27490 : 402.0) Integral membrane Yip1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Yip1 domain (InterPro:IPR006977); BEST Arabidopsis thaliana protein match is: Integral membrane Yip1 family protein (TAIR:AT3G05280.1); Has 530 Blast hits to 529 proteins in 180 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 113; Plants - 90; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (gnl|cdd|38324 : 222.0) no description available & (gnl|cdd|86741 : 102.0) no description available & (reliability: 804.0) & (original description: Putative PGSC0003DMG400028610, Description = Protein YIPF, PFAM = PF04893)' T '35.1' 'not assigned.no ontology' 'niben101scf00375_130875-133195' '(at3g52790 : 125.0) peptidoglycan-binding LysM domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392); BEST Arabidopsis thaliana protein match is: peptidoglycan-binding LysM domain-containing protein (TAIR:AT4G25433.1); Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative Ccrd_007644, Description = Peptidoglycan-binding lysin domain-containing protein, PFAM = PF01476)' T '35.1' 'not assigned.no ontology' 'niben101scf00376_372779-375597' '(at3g48800 : 115.0) Sterile alpha motif (SAM) domain-containing protein; CONTAINS InterPro DOMAIN/s: Sterile alpha motif-type (InterPro:IPR013761), Sterile alpha motif (InterPro:IPR001660), Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 2 (InterPro:IPR011510); BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT5G23680.1); Has 394 Blast hits to 394 proteins in 73 species: Archae - 0; Bacteria - 19; Metazoa - 279; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative , Description = Protein bicaudal C isogeny 1, PFAM = PF00536)' T '35.1' 'not assigned.no ontology' 'niben101scf00376_376605-380991' '(at5g14030 : 150.0) translocon-associated protein beta (TRAPB) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translocon-associated beta (InterPro:IPR008856); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38527 : 123.0) no description available & (gnl|cdd|69286 : 114.0) no description available & (reliability: 300.0) & (original description: Putative PGSC0003DMG400020198, Description = Translocon-associated protein subunit beta, PFAM = PF05753)' T '35.1' 'not assigned.no ontology' 'niben101scf00381_62495-98412' '(at1g19100 : 102.0) Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (TAIR:AT4G36280.1); Has 533 Blast hits to 518 proteins in 94 species: Archae - 0; Bacteria - 53; Metazoa - 227; Fungi - 0; Plants - 195; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative Sb10g024390, Description = Putative uncharacterized protein Sb10g024390, PFAM = PF13589;PF07496)' T '35.1' 'not assigned.no ontology' 'niben101scf00383_121250-125742' '(at4g36280 : 104.0) Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: compromised recognition of TCV 1 (TAIR:AT4G36290.1); Has 498 Blast hits to 482 proteins in 78 species: Archae - 0; Bacteria - 36; Metazoa - 219; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative CRH1, Description = MORC family CW-type zinc finger protein 4, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00389_168761-182090' '(at2g44920 : 244.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentapeptide repeat (InterPro:IPR001646); BEST Arabidopsis thaliana protein match is: Pentapeptide repeat-containing protein (TAIR:AT1G12250.1); Has 15593 Blast hits to 6460 proteins in 916 species: Archae - 263; Bacteria - 11679; Metazoa - 260; Fungi - 2; Plants - 261; Viruses - 44; Other Eukaryotes - 3084 (source: NCBI BLink). & (reliability: 488.0) & (original description: Putative HB26, Description = Pentapeptide repeat protein, PFAM = PF00805)' T '35.1' 'not assigned.no ontology' 'niben101scf00393_360520-364974' '(at2g40935 : 231.0) PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT3G18470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86720 : 97.3) no description available & (reliability: 462.0) & (original description: Putative PCR10, Description = Protein PLANT CADMIUM RESISTANCE 10, PFAM = PF04749)' T '35.1' 'not assigned.no ontology' 'niben101scf00402_132725-140638' '(at1g09450 : 615.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719); Has 302 Blast hits to 302 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 120; Fungi - 113; Plants - 37; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|34676 : 108.0) no description available & (gnl|cdd|37675 : 89.8) no description available & (reliability: 1230.0) & (original description: Putative NtHaspin, Description = Serine/threonine-protein kinase haspin, PFAM = PF12330)' T '35.1' 'not assigned.no ontology' 'niben101scf00410_167148-184252' '(at4g23895 : 594.0) Pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: nucleoside diphosphate kinase activity, ATP binding; INVOLVED IN: UTP biosynthetic process, GTP biosynthetic process, CTP biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Nucleoside diphosphate kinase, core (InterPro:IPR001564), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Nucleoside diphosphate kinase family protein (TAIR:AT4G23900.1). & (q8rxa8|ndk4_spiol : 371.0) Nucleoside diphosphate kinase 4, chloroplast precursor (EC 2.7.4.6) (Nucleoside diphosphate kinase IV) (NDK IV) (NDP kinase IV) (NDPK IV) (Nucleoside diphosphate kinase III) - Spinacia oleracea (Spinach) & (gnl|cdd|58528 : 227.0) no description available & (gnl|cdd|36106 : 212.0) no description available & (reliability: 1188.0) & (original description: Putative NDK4, Description = Nucleoside diphosphate kinase 4, chloroplastic, PFAM = PF00334)' T '35.1' 'not assigned.no ontology' 'niben101scf00410_175761-181121' '(at4g23895 : 255.0) Pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: nucleoside diphosphate kinase activity, ATP binding; INVOLVED IN: UTP biosynthetic process, GTP biosynthetic process, CTP biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Nucleoside diphosphate kinase, core (InterPro:IPR001564), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Nucleoside diphosphate kinase family protein (TAIR:AT4G23900.1). & (reliability: 510.0) & (original description: Putative BnaC03g62070D, Description = BnaC03g62070D protein, PFAM = PF00169)' T '35.1' 'not assigned.no ontology' 'niben101scf00414_392415-396853' '(at5g56170 : 147.0) LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 (LLG1); BEST Arabidopsis thaliana protein match is: lorelei (TAIR:AT4G26466.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative gap, Description = Putative GPI-anchored protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00416_237239-242192' '(at2g19330 : 360.0) Encodes PIRL6, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.; plant intracellular ras group-related LRR 6 (PIRL6); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 7 (TAIR:AT4G29880.1); Has 63918 Blast hits to 28732 proteins in 1043 species: Archae - 35; Bacteria - 6419; Metazoa - 27911; Fungi - 2141; Plants - 23572; Viruses - 21; Other Eukaryotes - 3819 (source: NCBI BLink). & (gnl|cdd|35752 : 113.0) no description available & (reliability: 720.0) & (original description: Putative PIRL6, Description = Plant intracellular Ras-group-related LRR protein 6, PFAM = PF13855;PF13855)' T '35.1' 'not assigned.no ontology' 'niben101scf00420_281321-288593' '(at5g38890 : 260.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Exosome complex, component CSL4 (InterPro:IPR019495); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38619 : 166.0) no description available & (gnl|cdd|31293 : 102.0) no description available & (reliability: 520.0) & (original description: Putative EXOSC1, Description = Exosome complex component CSL4, PFAM = PF10447;PF14382)' T '35.1' 'not assigned.no ontology' 'niben101scf00428_783762-787175' '(at3g18260 : 219.0) Reticulon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT3G10260.2); Has 1034 Blast hits to 1032 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 545; Fungi - 2; Plants - 476; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37003 : 166.0) no description available & (gnl|cdd|66169 : 128.0) no description available & (reliability: 438.0) & (original description: Putative RTNLB9, Description = Reticulon-like protein B9, PFAM = PF02453)' T '35.1' 'not assigned.no ontology' 'niben101scf00435_136108-141452' '(at1g50660 : 527.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20350.1); Has 21445 Blast hits to 15134 proteins in 1325 species: Archae - 461; Bacteria - 2309; Metazoa - 11052; Fungi - 1737; Plants - 1035; Viruses - 42; Other Eukaryotes - 4809 (source: NCBI BLink). & (reliability: 1054.0) & (original description: Putative BnaC06g03880D, Description = BnaC06g03880D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00435_330673-333467' '(at5g54980 : 169.0) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT1G17200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative VIT_19s0090g00570, Description = CASP-like protein 2D1, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf00437_12774-15753' '(at4g16380 : 102.0) Heavy metal transport/detoxification superfamily protein ; BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G51090.1); Has 3773 Blast hits to 3325 proteins in 370 species: Archae - 4; Bacteria - 381; Metazoa - 1697; Fungi - 490; Plants - 712; Viruses - 65; Other Eukaryotes - 424 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative bac, Description = Neurofilament medium polypeptide, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00439_1145074-1150832' '(at4g12130 : 459.0) Glycine cleavage T-protein family; FUNCTIONS IN: aminomethyltransferase activity; INVOLVED IN: glycine catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Folate-binding, YgfZ (InterPro:IPR017703), Glycine cleavage T-protein, N-terminal (InterPro:IPR006222), Glycine cleavage T-protein, C-terminal barrel (InterPro:IPR013977); Has 3767 Blast hits to 3765 proteins in 1151 species: Archae - 14; Bacteria - 1914; Metazoa - 108; Fungi - 149; Plants - 51; Viruses - 0; Other Eukaryotes - 1531 (source: NCBI BLink). & (gnl|cdd|38140 : 292.0) no description available & (gnl|cdd|30703 : 155.0) no description available & (reliability: 918.0) & (original description: Putative At4g12130, Description = Putative transferase At4g12130, mitochondrial, PFAM = PF08669)' T '35.1' 'not assigned.no ontology' 'niben101scf00445_16915-25224' '(at4g24970 : 703.0) Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; FUNCTIONS IN: ATP binding; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (TAIR:AT5G50780.1); Has 769 Blast hits to 718 proteins in 131 species: Archae - 4; Bacteria - 82; Metazoa - 313; Fungi - 18; Plants - 223; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|37056 : 418.0) no description available & (reliability: 1374.0) & (original description: Putative MORC5, Description = Protein MICRORCHIDIA 5, PFAM = PF13589)' T '35.1' 'not assigned.no ontology' 'niben101scf00447_175971-181189' '(at5g41620 : 217.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: intracellular protein transport protein USO1-related (TAIR:AT1G64180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 434.0) & (original description: Putative PGSC0003DMG400000084, Description = Intracellular protein transporter USO1-like protein, putative, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00449_577038-581027' '(at3g55390 : 179.0) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G38480.1); Has 361 Blast hits to 361 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 361; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative POPTRDRAFT_822486, Description = CASP-like protein 4C2, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf00453_438548-446582' '(at3g57200 : 228.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41451.1); Has 94 Blast hits to 94 proteins in 31 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative ABI8, Description = Elongation defective 1 protein/ELD1 protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00457_1103126-1110257' '(at2g36840 : 535.0) ACT-like superfamily protein; FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain-containing protein (TAIR:AT2G39570.1); Has 798 Blast hits to 670 proteins in 149 species: Archae - 0; Bacteria - 272; Metazoa - 0; Fungi - 7; Plants - 430; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). & (gnl|cdd|80426 : 127.0) no description available & (reliability: 1070.0) & (original description: Putative ACR10, Description = ACT domain-containing protein ACR10, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00465_223969-232126' '(at1g26160 : 323.0) Metal-dependent phosphohydrolase; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607); BEST Arabidopsis thaliana protein match is: Metal-dependent phosphohydrolase (TAIR:AT2G23820.2); Has 1552 Blast hits to 1531 proteins in 690 species: Archae - 126; Bacteria - 959; Metazoa - 120; Fungi - 153; Plants - 73; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink). & (gnl|cdd|38407 : 261.0) no description available & (gnl|cdd|32080 : 125.0) no description available & (reliability: 646.0) & (original description: Putative hddc2, Description = Hydrolase-HD superfamily protein, PFAM = PF13023)' T '35.1' 'not assigned.no ontology' 'niben101scf00467_181852-188620' '(gnl|cdd|72813 : 246.0) no description available & (at3g05270 : 229.0) Plant protein of unknown function (DUF869); EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G21810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative FPP3, Description = Filament-like plant protein 3, PFAM = PF05911;PF05911;PF05911)' T '35.1' 'not assigned.no ontology' 'niben101scf00472_269032-277720' '(gnl|cdd|36491 : 462.0) no description available & (at1g10950 : 446.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis.; transmembrane nine 1 (TMN1); LOCATED IN: integral to membrane, Golgi apparatus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G37310.1); Has 1611 Blast hits to 1538 proteins in 326 species: Archae - 0; Bacteria - 16; Metazoa - 610; Fungi - 273; Plants - 454; Viruses - 0; Other Eukaryotes - 258 (source: NCBI BLink). & (gnl|cdd|66650 : 296.0) no description available & (reliability: 892.0) & (original description: Putative tm9sf3, Description = Transmembrane 9 superfamily member, PFAM = PF02990;PF02990)' T '35.1' 'not assigned.no ontology' 'niben101scf00472_354399-364287' '(at1g22930 : 819.0) T-complex protein 11; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: T-complex 11 (InterPro:IPR008862); BEST Arabidopsis thaliana protein match is: T-complex protein 11 (TAIR:AT4G09150.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37192 : 251.0) no description available & (gnl|cdd|69326 : 222.0) no description available & (reliability: 1638.0) & (original description: Putative BnaA09g30260D, Description = BnaA09g30260D protein, PFAM = PF05794)' T '35.1' 'not assigned.no ontology' 'niben101scf00477_58468-64303' '(at5g09430 : 363.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G39955.1); Has 8280 Blast hits to 8277 proteins in 1491 species: Archae - 97; Bacteria - 6100; Metazoa - 351; Fungi - 79; Plants - 382; Viruses - 0; Other Eukaryotes - 1271 (source: NCBI BLink). & (gnl|cdd|36667 : 177.0) no description available & (gnl|cdd|30941 : 109.0) no description available & (reliability: 726.0) & (original description: Putative BnaA10g22540D, Description = BnaA10g22540D protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf00482_682669-686689' '(at4g23490 : 604.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT4G11350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68226 : 420.0) no description available & (gnl|cdd|37457 : 278.0) no description available & (reliability: 1208.0) & (original description: Putative BnaC02g27390D, Description = BnaC02g27390D protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben101scf00486_436257-448299' '(at1g27840 : 503.0) Encodes a DDB1a interacting protein ATCSA-1 required for UV-B tolerance and genomic integrity.; ATCSA-1; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G19750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39484 : 313.0) no description available & (gnl|cdd|29257 : 114.0) no description available & (reliability: 1006.0) & (original description: Putative Sb03g040420, Description = Putative uncharacterized protein Sb03g040420, PFAM = PF00400;PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf00490_3102-25003' '(at5g13560 : 605.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37370.1); Has 12055 Blast hits to 8846 proteins in 811 species: Archae - 217; Bacteria - 1046; Metazoa - 6104; Fungi - 1115; Plants - 528; Viruses - 14; Other Eukaryotes - 3031 (source: NCBI BLink). & (reliability: 1210.0) & (original description: Putative At5g13560, Description = At5g13560, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00490_8891-24657' '(at5g13560 : 550.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37370.1); Has 12055 Blast hits to 8846 proteins in 811 species: Archae - 217; Bacteria - 1046; Metazoa - 6104; Fungi - 1115; Plants - 528; Viruses - 14; Other Eukaryotes - 3031 (source: NCBI BLink). & (reliability: 1100.0) & (original description: Putative Os01g0155400, Description = Os01g0155400 protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00491_537843-548040' '(at3g18500 : 468.0) DNAse I-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G73875.1). & (gnl|cdd|37549 : 203.0) no description available & (gnl|cdd|34836 : 112.0) no description available & (reliability: 936.0) & (original description: Putative DXPS3, Description = Carbon catabolite repressor protein 4 like 3, PFAM = PF03372)' T '35.1' 'not assigned.no ontology' 'niben101scf00496_12345-20200' '(at2g37240 : 297.0) Thioredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT5G65840.1); Has 368 Blast hits to 368 proteins in 75 species: Archae - 0; Bacteria - 23; Metazoa - 194; Fungi - 17; Plants - 121; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|39698 : 165.0) no description available & (gnl|cdd|48519 : 120.0) no description available & (reliability: 594.0) & (original description: Putative TOP6A, Description = AhpC/TSA antioxidant enzyme domain-containing protein 1, PFAM = PF13911)' T '35.1' 'not assigned.no ontology' 'niben101scf00504_6843-10917' '(at5g03370 : 143.0) acylphosphatase family; FUNCTIONS IN: acylphosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acylphosphatase-like (InterPro:IPR001792), Acylphosphatase, conserved site (InterPro:IPR017968), Acylphosphatase (InterPro:IPR020456); Has 2946 Blast hits to 2946 proteins in 1156 species: Archae - 171; Bacteria - 2226; Metazoa - 216; Fungi - 33; Plants - 44; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink). & (gnl|cdd|38570 : 102.0) no description available & (gnl|cdd|31446 : 101.0) no description available & (reliability: 286.0) & (original description: Putative acyP, Description = Acylphosphatase, PFAM = PF00708)' T '35.1' 'not assigned.no ontology' 'niben101scf00504_601188-604125' '(at2g20830 : 319.0) transferases;folic acid binding; FUNCTIONS IN: folic acid binding, transferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Formiminotransferase, N-terminal subdomain (InterPro:IPR012886), Formiminotransferas, N- and C-terminal subdomains (InterPro:IPR022384). & (gnl|cdd|71277 : 165.0) no description available & (reliability: 638.0) & (original description: Putative GFT1, Description = Glutamate formiminotransferase 1, PFAM = PF07837)' T '35.1' 'not assigned.no ontology' 'niben101scf00506_182614-186614' '(at4g27460 : 258.0) Cystathionine beta-synthase (CBS) family protein; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein (TAIR:AT5G53750.1); Has 145 Blast hits to 145 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|36975 : 86.2) no description available & (reliability: 516.0) & (original description: Putative CBSX5, Description = CBS domain-containing protein CBSX5, PFAM = PF00571)' T '35.1' 'not assigned.no ontology' 'niben101scf00519_80048-89506' '(at2g28390 : 663.0) SAND family protein; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar fusion protein MON1 (InterPro:IPR004353); Has 753 Blast hits to 594 proteins in 226 species: Archae - 6; Bacteria - 38; Metazoa - 289; Fungi - 213; Plants - 47; Viruses - 3; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|66814 : 271.0) no description available & (gnl|cdd|36215 : 251.0) no description available & (reliability: 1326.0) & (original description: Putative At2g28390, Description = At2g28390/T1B3.9, PFAM = PF03164)' T '35.1' 'not assigned.no ontology' 'niben101scf00543_64986-73377' '(at1g59650 : 599.0) Encodes CW14.; CW14; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT1G10410.1); Has 261 Blast hits to 261 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|70520 : 276.0) no description available & (reliability: 1198.0) & (original description: Putative CW14, Description = CW14 protein, PFAM = PF07059)' T '35.1' 'not assigned.no ontology' 'niben101scf00574_955285-969679' '(at1g60670 : 180.0) Protein of unknown function (DUF3755); INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3755 (InterPro:IPR022228); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3755) (TAIR:AT1G10820.2); Has 165 Blast hits to 165 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative DRIF1, Description = Putative homeodomain-like transcription factor superfamily protein, PFAM = PF12579)' T '35.1' 'not assigned.no ontology' 'niben101scf00576_31601-34206' '(at5g11090 : 105.0) serine-rich protein-related; BEST Arabidopsis thaliana protein match is: serine-rich protein-related (TAIR:AT5G25280.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative , Description = Dual specificity tyrosine-phosphorylation-regulated kinase-like, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00576_250119-253846' '(at1g80630 : 282.0) RNI-like superfamily protein; BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT4G15475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39542 : 86.6) no description available & (reliability: 564.0) & (original description: Putative , Description = , PFAM = PF00646;PF13516;PF13516)' T '35.1' 'not assigned.no ontology' 'niben101scf00585_93285-100454' '(at4g35530 : 179.0) phosphatidylinositolglycan-related; CONTAINS InterPro DOMAIN/s: GPI-GlcNAc transferase complex, PIG-H component (InterPro:IPR019328); Has 106 Blast hits to 106 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 13; Plants - 40; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|39751 : 130.0) no description available & (reliability: 358.0) & (original description: Putative BnaA01g01930D, Description = BnaA01g01930D protein, PFAM = PF10181)' T '35.1' 'not assigned.no ontology' 'niben101scf00586_4035-9071' '(at3g53850 : 176.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT5G02060.1); Has 207 Blast hits to 207 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative At3g53850, Description = CASP-like protein 5B2, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf00592_520481-530138' '(at4g35890 : 159.0) winged-helix DNA-binding transcription factor family protein; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT5G66100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47984 : 94.5) no description available & (reliability: 318.0) & (original description: Putative LARP1C, Description = Winged-helix DNA-binding transcription factor family protein, putative, PFAM = PF05383)' T '35.1' 'not assigned.no ontology' 'niben101scf00592_520493-530053' '(at4g35890 : 160.0) winged-helix DNA-binding transcription factor family protein; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT5G66100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47984 : 94.5) no description available & (reliability: 320.0) & (original description: Putative LARP1C, Description = La-related protein 1C, PFAM = PF05383)' T '35.1' 'not assigned.no ontology' 'niben101scf00593_235718-312154' '(at5g62740 : 504.0) HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1 (HIR1); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT1G69840.7); Has 5648 Blast hits to 5647 proteins in 1784 species: Archae - 171; Bacteria - 3783; Metazoa - 267; Fungi - 306; Plants - 270; Viruses - 3; Other Eukaryotes - 848 (source: NCBI BLink). & (gnl|cdd|37831 : 381.0) no description available & (gnl|cdd|48219 : 358.0) no description available & (reliability: 1008.0) & (original description: Putative HIR4, Description = Hypersensitive-induced response protein 4, PFAM = PF01145)' T '35.1' 'not assigned.no ontology' 'niben101scf00593_235736-245102' '(at5g62740 : 511.0) HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1 (HIR1); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT1G69840.7); Has 5648 Blast hits to 5647 proteins in 1784 species: Archae - 171; Bacteria - 3783; Metazoa - 267; Fungi - 306; Plants - 270; Viruses - 3; Other Eukaryotes - 848 (source: NCBI BLink). & (gnl|cdd|37831 : 383.0) no description available & (gnl|cdd|48219 : 358.0) no description available & (reliability: 1022.0) & (original description: Putative HIR1, Description = Hypersensitive-induced response protein 1, PFAM = PF01145)' T '35.1' 'not assigned.no ontology' 'niben101scf00593_397126-413870' '(at5g62760 : 424.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages. & (reliability: 848.0) & (original description: Putative YLPM1, Description = YLPM1, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00595_85586-91666' '(at3g49070 : 271.0) Protein of unknown function (DUF677); INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT3G19330.1); Has 169 Blast hits to 169 proteins in 18 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 155; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 542.0) & (original description: Putative At3g49070, Description = UPF0496 protein At3g49070, PFAM = PF05055)' T '35.1' 'not assigned.no ontology' 'niben101scf00595_415338-419850' '(at4g25600 : 221.0) Oxoglutarate/iron-dependent oxygenase; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, iron ion binding, L-ascorbic acid binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Metridin-like ShK toxin (InterPro:IPR003582); BEST Arabidopsis thaliana protein match is: Oxoglutarate/iron-dependent oxygenase (TAIR:AT3G28480.1); Has 1193 Blast hits to 1161 proteins in 233 species: Archae - 0; Bacteria - 285; Metazoa - 424; Fungi - 0; Plants - 372; Viruses - 8; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|36804 : 137.0) no description available & (reliability: 442.0) & (original description: Putative P4H12, Description = Probable prolyl 4-hydroxylase 12, PFAM = PF13640)' T '35.1' 'not assigned.no ontology' 'niben101scf00595_475619-484127' '(at5g23890 : 550.0) LOCATED IN: mitochondrion, chloroplast thylakoid membrane, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: S-layer homology domain (InterPro:IPR001119); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52410.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1100.0) & (original description: Putative BnaA06g26460D, Description = BnaA06g26460D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00597_300819-305722' '(at3g24730 : 187.0) mRNA splicing factor, thioredoxin-like U5 snRNP; FUNCTIONS IN: catalytic activity; INVOLVED IN: mitosis; LOCATED IN: spliceosomal complex; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), mRNA splicing factor, thioredoxin-like U5 snRNP (InterPro:IPR004123), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: mRNA splicing factor, thioredoxin-like U5 snRNP (TAIR:AT5G08290.1); Has 535 Blast hits to 535 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 213; Fungi - 146; Plants - 109; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|48535 : 161.0) no description available & (gnl|cdd|38624 : 147.0) no description available & (reliability: 374.0) & (original description: Putative TXNL4B, Description = Thioredoxin-like protein 4B, PFAM = PF02966)' T '35.1' 'not assigned.no ontology' 'niben101scf00597_786935-790888' '(at2g20320 : 266.0) DENN (AEX-3) domain-containing protein; CONTAINS InterPro DOMAIN/s: uDENN (InterPro:IPR005113), dDENN (InterPro:IPR005112), DENN (InterPro:IPR001194); BEST Arabidopsis thaliana protein match is: DENN (AEX-3) domain-containing protein (TAIR:AT5G35560.1); Has 1567 Blast hits to 1546 proteins in 147 species: Archae - 0; Bacteria - 2; Metazoa - 1072; Fungi - 78; Plants - 117; Viruses - 0; Other Eukaryotes - 298 (source: NCBI BLink). & (reliability: 532.0) & (original description: Putative , Description = DENN domain containing protein, expressed, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00602_7656-18670' '(at3g06880 : 993.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: binding, nucleotide binding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781). & (reliability: 1986.0) & (original description: Putative Os05g0363500, Description = Os05g0363500 protein, PFAM = PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf00603_302250-306747' '(at1g01225 : 281.0) NC domain-containing protein-related; CONTAINS InterPro DOMAIN/s: NC (InterPro:IPR007053); BEST Arabidopsis thaliana protein match is: NC domain-containing protein-related (TAIR:AT4G00905.1); Has 173 Blast hits to 172 proteins in 34 species: Archae - 0; Bacteria - 24; Metazoa - 5; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 562.0) & (original description: Putative BnaCnng08590D, Description = BnaCnng08590D protein, PFAM = PF04970)' T '35.1' 'not assigned.no ontology' 'niben101scf00603_307855-311661' '(at4g00905 : 271.0) NC domain-containing protein-related; CONTAINS InterPro DOMAIN/s: NC (InterPro:IPR007053); BEST Arabidopsis thaliana protein match is: NC domain-containing protein-related (TAIR:AT1G01225.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative At5g06370, Description = Lecithin retinol acyltransferase, PFAM = PF04970)' T '35.1' 'not assigned.no ontology' 'niben101scf00606_332333-351842' '(at4g36530 : 289.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G19850.1); Has 21771 Blast hits to 21766 proteins in 2265 species: Archae - 246; Bacteria - 15770; Metazoa - 624; Fungi - 315; Plants - 912; Viruses - 5; Other Eukaryotes - 3899 (source: NCBI BLink). & (gnl|cdd|69240 : 133.0) no description available & (gnl|cdd|36667 : 94.0) no description available & (reliability: 578.0) & (original description: Putative ZOSMA_1G00690, Description = Hydrolase, alpha/beta fold family protein, PFAM = PF05705;PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf00616_3265-8871' '(at5g41460 : 712.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT4G23490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68226 : 439.0) no description available & (gnl|cdd|37457 : 308.0) no description available & (reliability: 1424.0) & (original description: Putative GT31C5, Description = Glycosyltransferase-like protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben101scf00630_534689-542989' '(at1g78070 : 621.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G36070.1); Has 25796 Blast hits to 12397 proteins in 585 species: Archae - 64; Bacteria - 7254; Metazoa - 7661; Fungi - 5235; Plants - 2447; Viruses - 0; Other Eukaryotes - 3135 (source: NCBI BLink). & (gnl|cdd|29257 : 90.1) no description available & (gnl|cdd|39732 : 80.5) no description available & (reliability: 1242.0) & (original description: Putative gbp3, Description = GAMYB-binding protein, PFAM = PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf00635_36133-45702' '(at1g69340 : 867.0) appr-1-p processing enzyme family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Appr-1-p processing (InterPro:IPR002589); BEST Arabidopsis thaliana protein match is: appr-1-p processing enzyme family protein (TAIR:AT2G40600.1); Has 3597 Blast hits to 3538 proteins in 1210 species: Archae - 64; Bacteria - 1971; Metazoa - 984; Fungi - 140; Plants - 224; Viruses - 8; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|28845 : 230.0) no description available & (gnl|cdd|37844 : 209.0) no description available & (reliability: 1734.0) & (original description: Putative ymdB, Description = O-acetyl-ADP-ribose deacetylase, PFAM = PF01661;PF13716)' T '35.1' 'not assigned.no ontology' 'niben101scf00635_683560-695062' '(at1g26520 : 487.0) Cobalamin biosynthesis CobW-like protein; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495), Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal (InterPro:IPR011629); BEST Arabidopsis thaliana protein match is: Cobalamin biosynthesis CobW-like protein (TAIR:AT1G15730.1); Has 8517 Blast hits to 8427 proteins in 1716 species: Archae - 88; Bacteria - 6047; Metazoa - 151; Fungi - 280; Plants - 232; Viruses - 0; Other Eukaryotes - 1719 (source: NCBI BLink). & (gnl|cdd|37954 : 383.0) no description available & (gnl|cdd|30869 : 264.0) no description available & (reliability: 974.0) & (original description: Putative Cbwd1, Description = COBW domain-containing protein 1, PFAM = PF02492;PF07683)' T '35.1' 'not assigned.no ontology' 'niben101scf00635_908829-919233' '(at1g13820 : 456.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G39220.1); Has 7432 Blast hits to 7419 proteins in 1219 species: Archae - 99; Bacteria - 5035; Metazoa - 262; Fungi - 72; Plants - 574; Viruses - 0; Other Eukaryotes - 1390 (source: NCBI BLink). & (gnl|cdd|36667 : 181.0) no description available & (gnl|cdd|30941 : 92.8) no description available & (reliability: 912.0) & (original description: Putative At1g13820, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf00635_919234-932170' '(at1g13820 : 449.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G39220.1); Has 7432 Blast hits to 7419 proteins in 1219 species: Archae - 99; Bacteria - 5035; Metazoa - 262; Fungi - 72; Plants - 574; Viruses - 0; Other Eukaryotes - 1390 (source: NCBI BLink). & (gnl|cdd|36667 : 179.0) no description available & (gnl|cdd|30941 : 92.8) no description available & (reliability: 898.0) & (original description: Putative BnaA06g08840D, Description = BnaA06g08840D protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf00635_999565-1005498' '(at2g03510 : 411.0) SPFH/Band 7/PHB domain-containing membrane-associated protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); Has 1337 Blast hits to 1335 proteins in 540 species: Archae - 4; Bacteria - 923; Metazoa - 173; Fungi - 0; Plants - 41; Viruses - 8; Other Eukaryotes - 188 (source: NCBI BLink). & (gnl|cdd|38173 : 363.0) no description available & (gnl|cdd|48218 : 363.0) no description available & (reliability: 822.0) & (original description: Putative erlin1, Description = Erlin-1, PFAM = PF01145)' T '35.1' 'not assigned.no ontology' 'niben101scf00654_524257-542422' '(at5g56130 : 598.0) Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.; TEX1; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein (TAIR:AT5G67320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36621 : 477.0) no description available & (gnl|cdd|29257 : 147.0) no description available & (p93107|pf20_chlre : 92.4) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1196.0) & (original description: Putative THO3, Description = THO complex subunit 3, PFAM = PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf00661_284744-287464' '(at4g29870 : 216.0) Oligosaccharyltransferase complex/magnesium transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharyltransferase complex/magnesium transporter (InterPro:IPR021149); BEST Arabidopsis thaliana protein match is: Oligosaccharyltransferase complex/magnesium transporter family protein (TAIR:AT2G19340.2); Has 217 Blast hits to 217 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 154; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|38566 : 202.0) no description available & (reliability: 428.0) & (original description: Putative Ostc, Description = Oligosaccharyltransferase complex subunit OSTC, PFAM = PF04756)' T '35.1' 'not assigned.no ontology' 'niben101scf00668_144143-165560' '(at2g04940 : 447.0) scramblase-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Scramblase (InterPro:IPR005552); Has 427 Blast hits to 416 proteins in 142 species: Archae - 0; Bacteria - 29; Metazoa - 228; Fungi - 113; Plants - 38; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|67419 : 210.0) no description available & (gnl|cdd|35840 : 182.0) no description available & (reliability: 894.0) & (original description: Putative At2g04940, Description = Expressed protein, PFAM = PF03803)' T '35.1' 'not assigned.no ontology' 'niben101scf00669_70997-74055' '(at2g37400 : 192.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid lumen, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G53560.1); Has 2154 Blast hits to 1804 proteins in 477 species: Archae - 203; Bacteria - 1195; Metazoa - 120; Fungi - 25; Plants - 138; Viruses - 0; Other Eukaryotes - 473 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative At2g37400, Description = At2g37400, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00682_539791-559782' '(at5g11560 : 1271.0) catalytics; FUNCTIONS IN: catalytic activity; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1620 (InterPro:IPR011678), Quinonprotein alcohol dehydrogenase-like (InterPro:IPR011047); Has 475 Blast hits to 428 proteins in 206 species: Archae - 4; Bacteria - 52; Metazoa - 151; Fungi - 150; Plants - 40; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (gnl|cdd|37314 : 729.0) no description available & (gnl|cdd|87370 : 354.0) no description available & (reliability: 2542.0) & (original description: Putative At5g11560, Description = PQQ_DH domain-containing protein, PFAM = PF07774;PF13360)' T '35.1' 'not assigned.no ontology' 'niben101scf00687_336406-340520' '(at4g01870 : 791.0) tolB protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cyclopentenone; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40-like Beta Propeller (InterPro:IPR011659), Peptidase S9B, dipeptidylpeptidase IV N-terminal (InterPro:IPR002469), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: DPP6 N-terminal domain-like protein (TAIR:AT1G21680.1); Has 6090 Blast hits to 4220 proteins in 1098 species: Archae - 42; Bacteria - 3414; Metazoa - 20; Fungi - 42; Plants - 120; Viruses - 0; Other Eukaryotes - 2452 (source: NCBI BLink). & (gnl|cdd|81452 : 81.4) no description available & (reliability: 1582.0) & (original description: Putative BnaA03g26510D, Description = BnaA03g26510D protein, PFAM = PF07676;PF07676;PF07676)' T '35.1' 'not assigned.no ontology' 'niben101scf00690_155764-164624' '(gnl|cdd|37940 : 124.0) no description available & (at3g12180 : 111.0) Cornichon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular signaling pathway; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cornichon (InterPro:IPR003377); BEST Arabidopsis thaliana protein match is: Cornichon family protein (TAIR:AT1G12390.1); Has 605 Blast hits to 605 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 316; Fungi - 159; Plants - 93; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|66954 : 91.0) no description available & (reliability: 222.0) & (original description: Putative At3g12180, Description = Protein cornichon homolog 1, PFAM = PF03311)' T '35.1' 'not assigned.no ontology' 'niben101scf00691_563674-570595' '(at5g58000 : 268.0) Reticulon family protein; LOCATED IN: endoplasmic reticulum, chloroplast; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT2G20590.1); Has 1128 Blast hits to 1113 proteins in 146 species: Archae - 0; Bacteria - 2; Metazoa - 759; Fungi - 49; Plants - 88; Viruses - 4; Other Eukaryotes - 226 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative PGSC0003DMG400007900, Description = Reticulon-like protein, PFAM = PF02453)' T '35.1' 'not assigned.no ontology' 'niben101scf00693_157278-162853' '(at1g55830 : 235.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF812 (InterPro:IPR008530). & (gnl|cdd|37148 : 183.0) no description available & (gnl|cdd|69204 : 158.0) no description available & (reliability: 470.0) & (original description: Putative , Description = Coiled-coil domain-containing protein 22 isogeny, PFAM = PF05667;PF05667)' T '35.1' 'not assigned.no ontology' 'niben101scf00712_1433756-1454575' '(at4g38350 : 1646.0) Patched family protein; FUNCTIONS IN: hedgehog receptor activity; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Niemann-Pick C type protein (InterPro:IPR004765), Patched (InterPro:IPR003392), Sterol-sensing 5TM box (InterPro:IPR000731); BEST Arabidopsis thaliana protein match is: Patched family protein (TAIR:AT1G42470.1). & (gnl|cdd|37144 : 1157.0) no description available & (gnl|cdd|66176 : 176.0) no description available & (reliability: 3292.0) & (original description: Putative BnaC04g16320D, Description = BnaC04g16320D protein, PFAM = PF02460;PF02460;PF16414)' T '35.1' 'not assigned.no ontology' 'niben101scf00713_159469-167845' '(at1g03760 : 176.0) Prefoldin chaperone subunit family protein; FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Prefoldin alpha-like (InterPro:IPR004127), Prefoldin (InterPro:IPR009053); Has 429 Blast hits to 422 proteins in 142 species: Archae - 27; Bacteria - 8; Metazoa - 215; Fungi - 17; Plants - 37; Viruses - 4; Other Eukaryotes - 121 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative TCM_026905, Description = Prefoldin chaperone subunit family protein, putative isoform 2, PFAM = PF02996)' T '35.1' 'not assigned.no ontology' 'niben101scf00717_39547-44172' '(at1g63300 : 291.0) Myosin heavy chain-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: Myosin heavy chain-related protein (TAIR:AT5G41140.1); Has 241668 Blast hits to 113961 proteins in 3668 species: Archae - 3215; Bacteria - 50568; Metazoa - 96634; Fungi - 19056; Plants - 12907; Viruses - 1139; Other Eukaryotes - 58149 (source: NCBI BLink). & (reliability: 582.0) & (original description: Putative SIP24, Description = EEIG1/EHBP1 N-terminal domain-containing protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00717_41327-46081' '(at1g63300 : 369.0) Myosin heavy chain-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: Myosin heavy chain-related protein (TAIR:AT5G41140.1); Has 241668 Blast hits to 113961 proteins in 3668 species: Archae - 3215; Bacteria - 50568; Metazoa - 96634; Fungi - 19056; Plants - 12907; Viruses - 1139; Other Eukaryotes - 58149 (source: NCBI BLink). & (reliability: 738.0) & (original description: Putative Ccrd_007916, Description = EEIG1/EHBP1 N-terminal domain-containing protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00717_246720-252474' '(at4g15050 : 213.0) Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G10190.1); Has 633 Blast hits to 604 proteins in 22 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 6; Plants - 620; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66735 : 156.0) no description available & (reliability: 426.0) & (original description: Putative , Description = , PFAM = PF14365;PF03080)' T '35.1' 'not assigned.no ontology' 'niben101scf00725_562844-572139' '(at1g73960 : 836.0) TBP-associated factor 2 (TAF2); FUNCTIONS IN: metallopeptidase activity, zinc ion binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37143 : 382.0) no description available & (reliability: 1672.0) & (original description: Putative TAF2, Description = Transcription initiation factor TFIID subunit 2, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00730_142071-149550' '(at3g09690 : 615.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G02970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1230.0) & (original description: Putative Sb01g038620, Description = Putative uncharacterized protein Sb01g038620, PFAM = PF00561)' T '35.1' 'not assigned.no ontology' 'niben101scf00742_11777-18645' '(at1g61150 : 340.0) LisH and RanBPM domains containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein, CRA domain (InterPro:IPR019589), CTLH, C-terminal LisH motif (InterPro:IPR006595), Ran binding protein-like, CRA domain (InterPro:IPR013144); BEST Arabidopsis thaliana protein match is: LisH and RanBPM domains containing protein (TAIR:AT4G09300.1); Has 726 Blast hits to 711 proteins in 198 species: Archae - 0; Bacteria - 50; Metazoa - 282; Fungi - 123; Plants - 213; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|37870 : 242.0) no description available & (reliability: 680.0) & (original description: Putative GID8, Description = Glucose-induced degradation protein 8 homolog, PFAM = PF10607;PF08513)' T '35.1' 'not assigned.no ontology' 'niben101scf00745_35616-75321' '(at2g25870 : 650.0) haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: metallopeptidase activity, hydrolase activity, catalytic activity, zinc ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0054, conserved site (InterPro:IPR020549), Cof protein (InterPro:IPR000150), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), HAD superfamily hydrolase-like, type 3 (InterPro:IPR013200), Uncharacterised protein family UPF0054 (InterPro:IPR002036); Has 22843 Blast hits to 22827 proteins in 2747 species: Archae - 229; Bacteria - 20428; Metazoa - 41; Fungi - 14; Plants - 67; Viruses - 0; Other Eukaryotes - 2064 (source: NCBI BLink). & (gnl|cdd|87484 : 193.0) no description available & (reliability: 1300.0) & (original description: Putative HDH1p, Description = HDH1p, PFAM = PF08282;PF02130)' T '35.1' 'not assigned.no ontology' 'niben101scf00747_255484-261568' '(at3g14010 : 298.0) hydroxyproline-rich glycoprotein family protein, similar to Mrs16p (GI:2737884) (Saccharomyces cerevisiae); weak similarity to ataxin-2 related protein (GI:1679686) (Homo sapiens). Included in a family of CTC interacting domain proteins found to interact with PAB2.; CTC-interacting domain 4 (CID4); FUNCTIONS IN: protein binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LsmAD domain (InterPro:IPR009604), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 3 (TAIR:AT1G54170.1). & (gnl|cdd|37586 : 139.0) no description available & (gnl|cdd|34779 : 106.0) no description available & (reliability: 580.0) & (original description: Putative CID3, Description = BnaC03g38270D protein, PFAM = PF14438;PF06741)' T '35.1' 'not assigned.no ontology' 'niben101scf00751_179811-217773' '(at1g60995 : 763.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Membralin (InterPro:IPR019144); Has 172 Blast hits to 170 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|37303 : 351.0) no description available & (reliability: 1526.0) & (original description: Putative At1g60995, Description = Putative uncharacterized protein At1g61000/T7P1_14, PFAM = PF09746)' T '35.1' 'not assigned.no ontology' 'niben101scf00755_162437-166408' '(gnl|cdd|66174 : 235.0) no description available & (at3g26040 : 198.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 2415 Blast hits to 2403 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 2353; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative catf2, Description = Acyl-transferase, PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'niben101scf00761_754479-756913' '(at2g20830 : 123.0) transferases;folic acid binding; FUNCTIONS IN: folic acid binding, transferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Formiminotransferase, N-terminal subdomain (InterPro:IPR012886), Formiminotransferas, N- and C-terminal subdomains (InterPro:IPR022384). & (gnl|cdd|87464 : 106.0) no description available & (gnl|cdd|39795 : 95.1) no description available & (reliability: 246.0) & (original description: Putative Sb10g027700, Description = Putative uncharacterized protein Sb10g027700, PFAM = PF09811)' T '35.1' 'not assigned.no ontology' 'niben101scf00775_219681-232015' '(at1g26120 : 574.0) Isoprenylcysteine methylesterase-like 1 (ICME-LIKE1); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Carboxylesterase, type B (InterPro:IPR002018), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: prenylcysteine methylesterase (TAIR:AT5G15860.1); Has 9242 Blast hits to 9224 proteins in 1573 species: Archae - 109; Bacteria - 5404; Metazoa - 1813; Fungi - 590; Plants - 239; Viruses - 5; Other Eukaryotes - 1082 (source: NCBI BLink). & (gnl|cdd|36729 : 112.0) no description available & (gnl|cdd|31002 : 102.0) no description available & (reliability: 1148.0) & (original description: Putative ICMEL1, Description = Probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL1, PFAM = PF07859)' T '35.1' 'not assigned.no ontology' 'niben101scf00781_159979-201944' '(at1g77600 : 799.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: binding (TAIR:AT5G47690.2). & (gnl|cdd|36738 : 437.0) no description available & (reliability: 1598.0) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'niben101scf00781_173740-183702' '(at1g77600 : 450.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: binding (TAIR:AT5G47690.2). & (gnl|cdd|36738 : 249.0) no description available & (reliability: 900.0) & (original description: Putative , Description = Androgen induced inhibitor of proliferation (As3) / pds5, putative, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00781_183895-197958' '(at1g77600 : 213.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: binding (TAIR:AT5G47690.2). & (reliability: 426.0) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'niben101scf00783_494-20993' '(at2g22400 : 831.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, RNA binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678), Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site (InterPro:IPR018314); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G40000.1); Has 8976 Blast hits to 8942 proteins in 2412 species: Archae - 298; Bacteria - 6215; Metazoa - 583; Fungi - 307; Plants - 251; Viruses - 0; Other Eukaryotes - 1322 (source: NCBI BLink). & (gnl|cdd|37409 : 403.0) no description available & (gnl|cdd|30493 : 198.0) no description available & (reliability: 1662.0) & (original description: Putative BnaA09g42670D, Description = BnaA09g42670D protein, PFAM = PF01189)' T '35.1' 'not assigned.no ontology' 'niben101scf00784_584-4714' '(gnl|cdd|86752 : 142.0) no description available & (at3g09980 : 120.0) Family of unknown function (DUF662) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF662 (InterPro:IPR007033); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF662) (TAIR:AT2G36410.2); Has 2513 Blast hits to 2174 proteins in 327 species: Archae - 81; Bacteria - 288; Metazoa - 1019; Fungi - 163; Plants - 196; Viruses - 10; Other Eukaryotes - 756 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative BnaC06g14260D, Description = BnaC06g14260D protein, PFAM = PF04949)' T '35.1' 'not assigned.no ontology' 'niben101scf00799_536145-539526' '(at1g21680 : 867.0) DPP6 N-terminal domain-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40-like Beta Propeller (InterPro:IPR011659), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21670.1); Has 9463 Blast hits to 5353 proteins in 1263 species: Archae - 75; Bacteria - 6165; Metazoa - 47; Fungi - 60; Plants - 122; Viruses - 0; Other Eukaryotes - 2994 (source: NCBI BLink). & (gnl|cdd|81452 : 98.7) no description available & (reliability: 1734.0) & (original description: Putative BnaA06g15400D, Description = BnaA06g15400D protein, PFAM = PF07676;PF07676;PF07676)' T '35.1' 'not assigned.no ontology' 'niben101scf00801_68102-84001' '(at1g16570 : 660.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38152 : 501.0) no description available & (reliability: 1320.0) & (original description: Putative TUN, Description = UDP-glycosyltransferase TURAN, PFAM = PF13692;PF13579)' T '35.1' 'not assigned.no ontology' 'niben101scf00811_696193-710783' '(at1g35470 : 561.0) SPla/RYanodine receptor (SPRY) domain-containing protein; CONTAINS InterPro DOMAIN/s: B302 (SPRY)-like (InterPro:IPR001870), CTLH, C-terminal LisH motif (InterPro:IPR006595), SPla/RYanodine receptor SPRY (InterPro:IPR003877), Ran binding protein, CRA domain (InterPro:IPR019589), SPla/RYanodine receptor subgroup (InterPro:IPR018355), LisH dimerisation motif (InterPro:IPR006594), Ran binding protein-like, CRA domain (InterPro:IPR013144); BEST Arabidopsis thaliana protein match is: SPla/RYanodine receptor (SPRY) domain-containing protein (TAIR:AT4G09340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36690 : 299.0) no description available & (gnl|cdd|84907 : 95.0) no description available & (reliability: 1122.0) & (original description: Putative At1g35470, Description = RanBPM-like protein, PFAM = PF00622;PF10607)' T '35.1' 'not assigned.no ontology' 'niben101scf00823_174333-177520' '(at4g15630 : 104.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT4G15620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68120 : 94.3) no description available & (reliability: 208.0) & (original description: Putative GSVIVT00023588001, Description = CASP-like protein 1E1, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf00830_73689-78639' '(at2g20830 : 363.0) transferases;folic acid binding; FUNCTIONS IN: folic acid binding, transferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Formiminotransferase, N-terminal subdomain (InterPro:IPR012886), Formiminotransferas, N- and C-terminal subdomains (InterPro:IPR022384). & (gnl|cdd|71277 : 167.0) no description available & (reliability: 726.0) & (original description: Putative GFT1, Description = Glutamate formiminotransferase 1, PFAM = PF07837)' T '35.1' 'not assigned.no ontology' 'niben101scf00831_232607-237423' '(at1g03070 : 345.0) Bax inhibitor-1 family protein; FUNCTIONS IN: glutamate binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Inhibitor of apoptosis-promoting Bax1 related (InterPro:IPR006214); BEST Arabidopsis thaliana protein match is: Bax inhibitor-1 family protein (TAIR:AT4G02690.1). & (gnl|cdd|37533 : 205.0) no description available & (gnl|cdd|31014 : 81.8) no description available & (reliability: 690.0) & (original description: Putative Bi, Description = Bax inhibitor, PFAM = PF01027)' T '35.1' 'not assigned.no ontology' 'niben101scf00853_427798-446668' '(at3g49890 : 128.0) unknown protein; Has 27 Blast hits to 27 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative BnaA03g40620D, Description = BnaA03g40620D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00861_493160-498529' '(at5g12460 : 398.0) Protein of unknown function (DUF604); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT2G37730.1); Has 562 Blast hits to 553 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 108; Fungi - 170; Plants - 273; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|68226 : 264.0) no description available & (gnl|cdd|37457 : 210.0) no description available & (reliability: 796.0) & (original description: Putative BnaA10g29930D, Description = BnaA10g29930D protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben101scf00861_493184-726864' '(at5g12460 : 367.0) Protein of unknown function (DUF604); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT2G37730.1); Has 562 Blast hits to 553 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 108; Fungi - 170; Plants - 273; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|68226 : 261.0) no description available & (gnl|cdd|37457 : 197.0) no description available & (reliability: 734.0) & (original description: Putative AT1G07850, Description = Transferring glycosyl group transferase, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben101scf00861_493352-498553' '(at5g12460 : 401.0) Protein of unknown function (DUF604); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT2G37730.1); Has 562 Blast hits to 553 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 108; Fungi - 170; Plants - 273; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|68226 : 263.0) no description available & (gnl|cdd|37457 : 207.0) no description available & (reliability: 802.0) & (original description: Putative At4g15240, Description = Glycosyltransferase, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben101scf00862_196841-213611' '(at5g12290 : 639.0) Encodes a mitochondrial outer membrane protein, involved in galactoglycerolipid biosynthesis. The dgd1 mutant phenotype is suppressed in the dgs1 mutant background.; DGD1 SUPPRESSOR 1 (DGS1); INVOLVED IN: galactolipid biosynthetic process, hydrogen peroxide biosynthetic process; LOCATED IN: mitochondrial outer membrane, mitochondrion, protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear control of ATP synthase 2 (InterPro:IPR013946); Has 223 Blast hits to 223 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 125; Plants - 59; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|72062 : 194.0) no description available & (reliability: 1278.0) & (original description: Putative DGS1, Description = Protein DGS1, mitochondrial, PFAM = PF08637)' T '35.1' 'not assigned.no ontology' 'niben101scf00870_1489251-1499763' '(at1g54170 : 356.0) ataxin-2-related, similar to SCA2 (GI:1770390) (Homo sapiens); similar to ataxin-2 (GI:3005020) (Mus musculus). Member of a family of PAM2 motif containing proteins.; CTC-interacting domain 3 (CID3); CONTAINS InterPro DOMAIN/s: LsmAD domain (InterPro:IPR009604), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 4 (TAIR:AT3G14010.3); Has 939 Blast hits to 759 proteins in 220 species: Archae - 0; Bacteria - 26; Metazoa - 423; Fungi - 216; Plants - 125; Viruses - 0; Other Eukaryotes - 149 (source: NCBI BLink). & (gnl|cdd|37586 : 144.0) no description available & (gnl|cdd|34779 : 100.0) no description available & (reliability: 712.0) & (original description: Putative CID4, Description = Polyadenylate-binding protein-interacting protein 4, PFAM = PF06741;PF14438)' T '35.1' 'not assigned.no ontology' 'niben101scf00872_523007-531869' '(at1g25570 : 772.0) Di-glucose binding protein with Leucine-rich repeat domain; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Malectin/receptor-like protein kinase (InterPro:IPR021720), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 4 (TAIR:AT1G28340.1); Has 39900 Blast hits to 11672 proteins in 418 species: Archae - 2; Bacteria - 388; Metazoa - 87; Fungi - 9; Plants - 38059; Viruses - 0; Other Eukaryotes - 1355 (source: NCBI BLink). & (q8lkz1|nork_pea : 90.1) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 1544.0) & (original description: Putative At1g25570, Description = Di-glucose binding protein with leucine-rich repeat domain, PFAM = PF12819)' T '35.1' 'not assigned.no ontology' 'niben101scf00873_197411-202505' '(at3g49190 : 196.0) O-acyltransferase (WSD1-like) family protein; CONTAINS InterPro DOMAIN/s: O-acyltransferase, WSD1, C-terminal (InterPro:IPR009721), O-acyltransferase, WSD1, N-terminal (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT3G49210.1); Has 1419 Blast hits to 1410 proteins in 214 species: Archae - 2; Bacteria - 1155; Metazoa - 6; Fungi - 2; Plants - 225; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|70441 : 91.4) no description available & (reliability: 392.0) & (original description: Putative glysoja_042312, Description = O-acyltransferase WSD1, PFAM = PF03007;PF06974)' T '35.1' 'not assigned.no ontology' 'niben101scf00883_1412720-1418968' '(at2g16595 : 236.0) Translocon-associated protein (TRAP), alpha subunit; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translocon-associated protein (TRAP), alpha subunit (InterPro:IPR005595); BEST Arabidopsis thaliana protein match is: Translocon-associated protein (TRAP), alpha subunit (TAIR:AT2G21160.1); Has 245 Blast hits to 245 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 29; Plants - 60; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|36844 : 223.0) no description available & (gnl|cdd|67507 : 86.3) no description available & (reliability: 472.0) & (original description: Putative tap1, Description = Translocon-associated protein (TRAP), alpha subunit, PFAM = PF03896)' T '35.1' 'not assigned.no ontology' 'niben101scf00885_1655247-1666209' '(at1g30300 : 526.0) Metallo-hydrolase/oxidoreductase superfamily protein; BEST Arabidopsis thaliana protein match is: Metallo-hydrolase/oxidoreductase superfamily protein (TAIR:AT4G03610.1); Has 2065 Blast hits to 2048 proteins in 545 species: Archae - 22; Bacteria - 934; Metazoa - 0; Fungi - 23; Plants - 103; Viruses - 0; Other Eukaryotes - 983 (source: NCBI BLink). & (gnl|cdd|74115 : 98.5) no description available & (reliability: 1052.0) & (original description: Putative LOC100273038, Description = Hydrolase-like protein, PFAM = PF12706)' T '35.1' 'not assigned.no ontology' 'niben101scf00890_241841-244266' '(at3g24060 : 143.0) Plant self-incompatibility protein S1 family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant self-incompatibility S1 (InterPro:IPR010264); BEST Arabidopsis thaliana protein match is: Plant self-incompatibility protein S1 family (TAIR:AT1G26798.1); Has 217 Blast hits to 212 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 217; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative At3g24060, Description = Self-incompatibility S1 family protein, PFAM = PF05938)' T '35.1' 'not assigned.no ontology' 'niben101scf00893_44979-57567' '(at2g18360 : 303.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, hypocotyl, root, leaf; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G36610.1); Has 8797 Blast hits to 8792 proteins in 1517 species: Archae - 89; Bacteria - 6094; Metazoa - 449; Fungi - 67; Plants - 445; Viruses - 0; Other Eukaryotes - 1653 (source: NCBI BLink). & (gnl|cdd|36667 : 139.0) no description available & (gnl|cdd|30941 : 96.7) no description available & (reliability: 606.0) & (original description: Putative PGSC0003DMG400000710, Description = Alpha/beta fold hydrolase, PFAM = PF00561)' T '35.1' 'not assigned.no ontology' 'niben101scf00893_157729-162157' '(at2g16365 : 95.9) F-box family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G16300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'niben101scf00920_567013-577768' '(at3g07080 : 386.0) EamA-like transporter family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: EamA-like transporter family (TAIR:AT4G32140.1); Has 3286 Blast hits to 3282 proteins in 690 species: Archae - 51; Bacteria - 1416; Metazoa - 341; Fungi - 278; Plants - 200; Viruses - 0; Other Eukaryotes - 1000 (source: NCBI BLink). & (gnl|cdd|37976 : 323.0) no description available & (reliability: 772.0) & (original description: Putative BnaC05g44890D, Description = BnaC05g44890D protein, PFAM = PF06027)' T '35.1' 'not assigned.no ontology' 'niben101scf00945_7165-12774' '(at1g07080 : 263.0) Thioredoxin superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma interferon inducible lysosomal thiol reductase GILT (InterPro:IPR004911), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: gamma interferon responsive lysosomal thiol (GILT) reductase family protein (TAIR:AT5G01580.1); Has 470 Blast hits to 463 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 320; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|38370 : 209.0) no description available & (gnl|cdd|86280 : 103.0) no description available & (reliability: 526.0) & (original description: Putative OSH1, Description = Gamma-interferon-inducible lysosomal thiol reductase, putative, PFAM = PF03227)' T '35.1' 'not assigned.no ontology' 'niben101scf00945_12405-21698' '(at1g07080 : 275.0) Thioredoxin superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma interferon inducible lysosomal thiol reductase GILT (InterPro:IPR004911), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: gamma interferon responsive lysosomal thiol (GILT) reductase family protein (TAIR:AT5G01580.1); Has 470 Blast hits to 463 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 320; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|38370 : 198.0) no description available & (gnl|cdd|86280 : 104.0) no description available & (reliability: 550.0) & (original description: Putative OSH1, Description = Gamma-interferon-inducible lysosomal thiol reductase, putative, PFAM = PF03227)' T '35.1' 'not assigned.no ontology' 'niben101scf00952_130509-135097' '(at4g15470 : 295.0) Bax inhibitor-1 family protein; CONTAINS InterPro DOMAIN/s: Inhibitor of apoptosis-promoting Bax1 related (InterPro:IPR006214); BEST Arabidopsis thaliana protein match is: Bax inhibitor-1 family protein (TAIR:AT1G03070.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37533 : 178.0) no description available & (gnl|cdd|31014 : 87.2) no description available & (reliability: 590.0) & (original description: Putative At4g15470, Description = BI1-like protein, PFAM = PF01027)' T '35.1' 'not assigned.no ontology' 'niben101scf00980_133175-139175' '(at2g41250 : 365.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity, phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), HAD-superfamily hydrolase, subfamily IA, REG-2-like (InterPro:IPR011949), HAD-superfamily hydrolase, subfamily IA, variant 1 (InterPro:IPR006439); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G14310.1); Has 5345 Blast hits to 5345 proteins in 1611 species: Archae - 258; Bacteria - 4323; Metazoa - 249; Fungi - 67; Plants - 142; Viruses - 0; Other Eukaryotes - 306 (source: NCBI BLink). & (gnl|cdd|38295 : 197.0) no description available & (gnl|cdd|84963 : 98.1) no description available & (reliability: 730.0) & (original description: Putative pco077559a, Description = HAD-superfamily hydrolase, subfamily IA, variant 1, PFAM = PF13419)' T '35.1' 'not assigned.no ontology' 'niben101scf00984_288436-306168' '(at1g68080 : 370.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39660 : 117.0) no description available & (reliability: 740.0) & (original description: Putative At1g68080, Description = 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein, PFAM = PF13640)' T '35.1' 'not assigned.no ontology' 'niben101scf00984_353440-356004' '(at1g48140 : 128.0) dolichol-phosphate mannosyltransferase-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichol-phosphate mannosyltransferase subunit 3 (InterPro:IPR013174). & (gnl|cdd|71718 : 88.0) no description available & (reliability: 256.0) & (original description: Putative Sb01g006570, Description = Putative uncharacterized protein Sb01g006570, PFAM = PF08285)' T '35.1' 'not assigned.no ontology' 'niben101scf00991_10420-20187' '(at3g49880 : 638.0) glycosyl hydrolase family protein 43; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 43 (InterPro:IPR006710); BEST Arabidopsis thaliana protein match is: Arabinanase/levansucrase/invertase (TAIR:AT5G67540.2); Has 1254 Blast hits to 1248 proteins in 224 species: Archae - 2; Bacteria - 1011; Metazoa - 1; Fungi - 133; Plants - 55; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 1276.0) & (original description: Putative At5g67540, Description = Arabinanase/levansucrase/invertase, PFAM = PF04616)' T '35.1' 'not assigned.no ontology' 'niben101scf00991_317120-331175' '(at3g49890 : 125.0) unknown protein; Has 27 Blast hits to 27 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative Sb01g043780, Description = Putative uncharacterized protein Sb01g043780, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf00996_232506-239050' '(at3g58830 : 317.0) haloacid dehalogenase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIIA (InterPro:IPR006549), Protein of unknown function DUF2010 (InterPro:IPR019001), HAD-superfamily phosphatase, subfamily IIIA (InterPro:IPR010021); Has 1169 Blast hits to 1165 proteins in 593 species: Archae - 0; Bacteria - 976; Metazoa - 0; Fungi - 84; Plants - 42; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|38172 : 211.0) no description available & (gnl|cdd|87964 : 165.0) no description available & (reliability: 634.0) & (original description: Putative Os01g0796500, Description = Os01g0796500 protein, PFAM = PF09419)' T '35.1' 'not assigned.no ontology' 'niben101scf01002_1006631-1013605' '(at1g53280 : 538.0) Class I glutamine amidotransferase-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DJ-1 (InterPro:IPR006287), ThiJ/PfpI (InterPro:IPR002818); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT3G14990.1); Has 10790 Blast hits to 6453 proteins in 1943 species: Archae - 322; Bacteria - 9097; Metazoa - 532; Fungi - 91; Plants - 351; Viruses - 0; Other Eukaryotes - 397 (source: NCBI BLink). & (gnl|cdd|37975 : 248.0) no description available & (gnl|cdd|28870 : 192.0) no description available & (reliability: 1076.0) & (original description: Putative DJ1A, Description = Protein DJ-1 homolog A, PFAM = PF01965;PF01965)' T '35.1' 'not assigned.no ontology' 'niben101scf01005_514010-528013' '(at5g65290 : 825.0) LMBR1-like membrane protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: LMBR1-like membrane protein, conserved region (InterPro:IPR006876); Has 378 Blast hits to 361 proteins in 164 species: Archae - 0; Bacteria - 1; Metazoa - 119; Fungi - 103; Plants - 62; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|37507 : 509.0) no description available & (reliability: 1650.0) & (original description: Putative Os02g0758100, Description = LMBR1 integral membrane protein-like, PFAM = PF04791)' T '35.1' 'not assigned.no ontology' 'niben101scf01006_340967-353046' '(at3g49200 : 448.0) O-acyltransferase (WSD1-like) family protein; CONTAINS InterPro DOMAIN/s: O-acyltransferase, WSD1, C-terminal (InterPro:IPR009721), O-acyltransferase, WSD1, N-terminal (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT3G49210.1); Has 1205 Blast hits to 1195 proteins in 171 species: Archae - 2; Bacteria - 951; Metazoa - 8; Fungi - 0; Plants - 226; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|70441 : 207.0) no description available & (reliability: 892.0) & (original description: Putative BnaA01g20700D, Description = BnaA01g20700D protein, PFAM = PF03007;PF06974)' T '35.1' 'not assigned.no ontology' 'niben101scf01008_78511-92588' '(at1g28340 : 861.0) receptor like protein 4 (RLP4); INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Malectin/receptor-like protein kinase (InterPro:IPR021720), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Leucine-rich repeat domain (TAIR:AT1G25570.1); Has 80698 Blast hits to 16677 proteins in 704 species: Archae - 13; Bacteria - 1525; Metazoa - 2886; Fungi - 292; Plants - 72469; Viruses - 0; Other Eukaryotes - 3513 (source: NCBI BLink). & (q8lkz1|nork_pea : 100.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 1722.0) & (original description: Putative RLP4, Description = Receptor like protein 4, PFAM = PF12819;PF13855)' T '35.1' 'not assigned.no ontology' 'niben101scf01015_1147-6024' '(at5g28750 : 99.0) Bacterial sec-independent translocation protein mttA/Hcf106; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, protein transport; LOCATED IN: chloroplast thylakoid membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial sec-independent translocation protein mttA/Hcf106 (InterPro:IPR003369), Twin-arginine translocation protein TatA/E (InterPro:IPR006312); BEST Arabidopsis thaliana protein match is: Bacterial sec-independent translocation protein mttA/Hcf106 (TAIR:AT5G52440.1); Has 3112 Blast hits to 3112 proteins in 1115 species: Archae - 68; Bacteria - 2578; Metazoa - 0; Fungi - 0; Plants - 106; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative tatA, Description = Sec-independent protein translocase protein TatA, PFAM = PF02416)' T '35.1' 'not assigned.no ontology' 'niben101scf01017_496492-501642' '(at2g30720 : 445.0) Thioesterase/thiol ester dehydrase-isomerase superfamily protein; BEST Arabidopsis thaliana protein match is: Thioesterase/thiol ester dehydrase-isomerase superfamily protein (TAIR:AT5G48370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37974 : 239.0) no description available & (gnl|cdd|48037 : 100.0) no description available & (reliability: 890.0) & (original description: Putative BnaCnng69840D, Description = BnaCnng69840D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf01022_279930-285301' '(at3g06610 : 95.5) DNA-binding enhancer protein-related; Has 198 Blast hits to 198 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi - 17; Plants - 36; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 191.0) & (original description: Putative F5E6.6, Description = DNA-binding enhancer-like protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf01055_111528-116160' '(at5g14030 : 201.0) translocon-associated protein beta (TRAPB) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translocon-associated beta (InterPro:IPR008856); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38527 : 151.0) no description available & (gnl|cdd|69286 : 140.0) no description available & (reliability: 402.0) & (original description: Putative PGSC0003DMG400020198, Description = Translocon-associated protein subunit beta, PFAM = PF05753)' T '35.1' 'not assigned.no ontology' 'niben101scf01060_151461-154776' '(at5g44550 : 166.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT4G20390.1); Has 554 Blast hits to 554 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 554; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68120 : 114.0) no description available & (reliability: 332.0) & (original description: Putative POPTRDRAFT_798217, Description = CASP-like protein 1B2, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf01062_403219-417263' '(at1g30890 : 299.0) Integral membrane HRF1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Hrf1 (InterPro:IPR005578); BEST Arabidopsis thaliana protein match is: Integral membrane HRF1 family protein (TAIR:AT3G59500.1); Has 474 Blast hits to 474 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 204; Fungi - 142; Plants - 75; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|38304 : 214.0) no description available & (gnl|cdd|67490 : 196.0) no description available & (reliability: 598.0) & (original description: Putative BD2, Description = YIF 1b, PFAM = PF03878)' T '35.1' 'not assigned.no ontology' 'niben101scf01063_993570-999429' '(at3g03150 : 86.3) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17165.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'niben101scf01063_1106493-1119095' '(at4g27860 : 159.0) vacuolar iron transporter (VIT) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: embryo, hypocotyl, root, pedicel, leaf; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217), Cytokine, IL-1-like (InterPro:IPR008996); BEST Arabidopsis thaliana protein match is: Vacuolar iron transporter (VIT) family protein (TAIR:AT4G27870.1). & (gnl|cdd|85817 : 85.0) no description available & (reliability: 318.0) & (original description: Putative MEB1, Description = Vacuolar iron transporter-like protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf01066_374097-398285' '(at5g48960 : 939.0) HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase; FUNCTIONS IN: 5'-nucleotidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase (InterPro:IPR008380); BEST Arabidopsis thaliana protein match is: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase (TAIR:AT1G75210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37680 : 429.0) no description available & (gnl|cdd|86943 : 406.0) no description available & (reliability: 1878.0) & (original description: Putative surE2, Description = HAD superfamily (Subfamily IG) hydrolase, 5'-nucleotidase, PFAM = PF05761)' T '35.1' 'not assigned.no ontology' 'niben101scf01075_178868-182999' '(at1g21880 : 233.0) lysm domain GPI-anchored protein 1 precursor (LYM1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell wall macromolecule catabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Peptidoglycan-binding Lysin subgroup (InterPro:IPR002482); BEST Arabidopsis thaliana protein match is: Peptidoglycan-binding LysM domain-containing protein (TAIR:AT1G77630.1); Has 660 Blast hits to 639 proteins in 131 species: Archae - 0; Bacteria - 238; Metazoa - 0; Fungi - 1; Plants - 404; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative Os02g0769200, Description = Os02g0769200 protein, PFAM = PF01476;PF01476;PF01476)' T '35.1' 'not assigned.no ontology' 'niben101scf01076_126891-140735' '(at2g46380 : 310.0) Protein of unknown function (DUF3133); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3133 (InterPro:IPR021480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3133) (TAIR:AT3G61670.1); Has 300 Blast hits to 240 proteins in 20 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 620.0) & (original description: Putative BnaA05g01430D, Description = BnaA05g01430D protein, PFAM = PF11331)' T '35.1' 'not assigned.no ontology' 'niben101scf01089_197573-206870' '(at5g60590 : 336.0) DHBP synthase RibB-like alpha/beta domain; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sua5/YciO/YrdC/YwlC (InterPro:IPR004388), DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945), Sua5/YciO/YrdC, N-terminal (InterPro:IPR006070); BEST Arabidopsis thaliana protein match is: DHBP synthase RibB-like alpha/beta domain (TAIR:AT3G01920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30359 : 148.0) no description available & (gnl|cdd|38261 : 103.0) no description available & (reliability: 672.0) & (original description: Putative YRDC, Description = YrdC domain-containing protein,mitochondrial, PFAM = PF01300)' T '35.1' 'not assigned.no ontology' 'niben101scf01091_37305-43692' '(at5g40270 : 606.0) HD domain-containing metal-dependent phosphohydrolase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607); BEST Arabidopsis thaliana protein match is: HD domain-containing metal-dependent phosphohydrolase family protein (TAIR:AT5G40290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37892 : 457.0) no description available & (gnl|cdd|31276 : 139.0) no description available & (reliability: 1212.0) & (original description: Putative At5g40270, Description = AT5g40270/MSN9_170, PFAM = PF01966)' T '35.1' 'not assigned.no ontology' 'niben101scf01091_106556-117357' '(at5g40300 : 159.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G36330.1); Has 212 Blast hits to 212 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|68120 : 97.7) no description available & (reliability: 318.0) & (original description: Putative At5g40300, Description = CASP-like protein 4A1, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf01093_391637-395038' '(at4g18760 : 290.0) receptor like protein 51 (RLP51); INVOLVED IN: signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 55 (TAIR:AT5G45770.1); Has 79225 Blast hits to 27308 proteins in 1069 species: Archae - 23; Bacteria - 3934; Metazoa - 14197; Fungi - 996; Plants - 54596; Viruses - 12; Other Eukaryotes - 5467 (source: NCBI BLink). & (reliability: 580.0) & (original description: Putative RLP51, Description = Receptor-like protein 51, PFAM = PF13855)' T '35.1' 'not assigned.no ontology' 'niben101scf01107_120002-126146' '(at5g08200 : 197.0) peptidoglycan-binding LysM domain-containing protein; BEST Arabidopsis thaliana protein match is: Peptidoglycan-binding LysM domain-containing protein (TAIR:AT5G23130.1); Has 390 Blast hits to 387 proteins in 72 species: Archae - 0; Bacteria - 10; Metazoa - 233; Fungi - 7; Plants - 113; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'niben101scf01109_517310-519954' '(at5g53730 : 217.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT3G44220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70773 : 141.0) no description available & (reliability: 434.0) & (original description: Putative HIN1, Description = NHL-like protein, PFAM = PF03168)' T '35.1' 'not assigned.no ontology' 'niben101scf01111_131937-141779' '(at4g22990 : 1034.0) Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein (TAIR:AT4G11810.1). & (gnl|cdd|37536 : 306.0) no description available & (gnl|cdd|66759 : 116.0) no description available & (reliability: 2068.0) & (original description: Putative At4g22990, Description = SPX domain-containing membrane protein At4g22990, PFAM = PF03105;PF07690)' T '35.1' 'not assigned.no ontology' 'niben101scf01115_437331-443113' '(at3g62860 : 521.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G47630.1); Has 2895 Blast hits to 2893 proteins in 1018 species: Archae - 30; Bacteria - 1827; Metazoa - 110; Fungi - 120; Plants - 454; Viruses - 49; Other Eukaryotes - 305 (source: NCBI BLink). & (gnl|cdd|36668 : 415.0) no description available & (gnl|cdd|32448 : 127.0) no description available & (reliability: 1042.0) & (original description: Putative At3g62860, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'niben101scf01119_482414-497749' '(at3g15090 : 499.0) GroES-like zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT1G23740.1); Has 32555 Blast hits to 32407 proteins in 2523 species: Archae - 489; Bacteria - 20756; Metazoa - 1208; Fungi - 3376; Plants - 855; Viruses - 0; Other Eukaryotes - 5871 (source: NCBI BLink). & (gnl|cdd|36412 : 234.0) no description available & (gnl|cdd|30949 : 200.0) no description available & (q8h0m1|qorh_spiol : 111.0) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) & (reliability: 998.0) & (original description: Putative Os01g0753100, Description = Os01g0753100 protein, PFAM = PF08240;PF13602)' T '35.1' 'not assigned.no ontology' 'niben101scf01119_618382-641207' '(at5g53940 : 209.0) Yippee family putative zinc-binding protein; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: Yippee family putative zinc-binding protein (TAIR:AT2G40110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p59234|yipl_soltu : 165.0) Protein yippee-like - Solanum tuberosum (Potato) & (gnl|cdd|38609 : 160.0) no description available & (gnl|cdd|66871 : 132.0) no description available & (reliability: 418.0) & (original description: Putative ypel, Description = Protein yippee-like, PFAM = PF03226)' T '35.1' 'not assigned.no ontology' 'niben101scf01123_108718-111155' '(at1g11760 : 152.0) MED32; Has 41 Blast hits to 40 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative MED32, Description = Mediator of RNA polymerase II transcription subunit 32, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf01123_114303-121737' '(at4g13970 : 1018.0) zinc ion binding; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: SWIM zinc finger family protein (TAIR:AT1G60560.1); Has 80 Blast hits to 80 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 2; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 2036.0) & (original description: Putative BnaCnng19360D, Description = BnaCnng19360D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf01124_1232771-1237085' '(at1g35510 : 748.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G01480.1); Has 838 Blast hits to 827 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 838; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 415.0) no description available & (reliability: 1496.0) & (original description: Putative At1g35510, Description = O-fucosyltransferase-like protein, PFAM = PF10250)' T '35.1' 'not assigned.no ontology' 'niben101scf01124_1660800-1670595' '(at3g18140 : 555.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G22040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35536 : 477.0) no description available & (gnl|cdd|29257 : 162.0) no description available & (reliability: 1110.0) & (original description: Putative lst8, Description = Protein LST8 homolog, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf01134_24224-68094' '(at3g56900 : 608.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 4015 Blast hits to 2516 proteins in 309 species: Archae - 52; Bacteria - 1176; Metazoa - 1329; Fungi - 813; Plants - 363; Viruses - 0; Other Eukaryotes - 282 (source: NCBI BLink). & (gnl|cdd|37350 : 382.0) no description available & (reliability: 1216.0) & (original description: Putative AAAS, Description = Aladin, PFAM = PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf01142_21425-33726' '(at1g52510 : 320.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G12830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 640.0) & (original description: Putative At1g52510, Description = Alpha/beta fold hydrolase, PFAM = PF00561)' T '35.1' 'not assigned.no ontology' 'niben101scf01142_237254-256558' '(at1g15290 : 1393.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G28080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37050 : 333.0) no description available & (reliability: 2786.0) & (original description: Putative At1g15290, Description = Tetratricopeptide repeat-containing protein, PFAM = PF15044;PF12807;PF13424;PF13424)' T '35.1' 'not assigned.no ontology' 'niben101scf01142_238394-242173' '(at4g28080 : 135.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G01320.2); Has 11837 Blast hits to 4947 proteins in 554 species: Archae - 95; Bacteria - 3252; Metazoa - 4987; Fungi - 1783; Plants - 350; Viruses - 14; Other Eukaryotes - 1356 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative TSS, Description = Eukaryotic translation initiation factor 3 subunit, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf01146_1362512-1373200' '(gnl|cdd|37659 : 944.0) no description available & (at3g23940 : 941.0) dehydratase family; CONTAINS InterPro DOMAIN/s: Dihydroxy-acid dehydratase (InterPro:IPR004404), Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site (InterPro:IPR020558), Dihydroxy-acid/6-phosphogluconate dehydratase (InterPro:IPR000581). & (gnl|cdd|80774 : 789.0) no description available & (reliability: 1882.0) & (original description: Putative DHAD, Description = Dihydroxy-acid dehydratase, chloroplastic, PFAM = PF00920)' T '35.1' 'not assigned.no ontology' 'niben101scf01147_382957-397577' '(at1g52200 : 210.0) PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT3G18450.1); Has 632 Blast hits to 631 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 75; Plants - 516; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|86720 : 107.0) no description available & (reliability: 420.0) & (original description: Putative PCR6, Description = AtPCR6, PFAM = PF04749)' T '35.1' 'not assigned.no ontology' 'niben101scf01148_255959-261946' '(at3g07570 : 365.0) Cytochrome b561/ferric reductase transmembrane with DOMON related domain; FUNCTIONS IN: dopamine beta-monooxygenase activity; INVOLVED IN: histidine catabolic process; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593), DOMON (InterPro:IPR013050); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane with DOMON related domain (TAIR:AT3G61750.1); Has 561 Blast hits to 559 proteins in 100 species: Archae - 0; Bacteria - 4; Metazoa - 121; Fungi - 31; Plants - 384; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|39494 : 185.0) no description available & (gnl|cdd|47940 : 98.8) no description available & (reliability: 730.0) & (original description: Putative At3g07570, Description = Cytochrome b561 and DOMON domain-containing protein At3g07570, PFAM = PF03188;PF03351)' T '35.1' 'not assigned.no ontology' 'niben101scf01155_551253-559982' '(at5g40270 : 614.0) HD domain-containing metal-dependent phosphohydrolase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607); BEST Arabidopsis thaliana protein match is: HD domain-containing metal-dependent phosphohydrolase family protein (TAIR:AT5G40290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37892 : 493.0) no description available & (gnl|cdd|31276 : 191.0) no description available & (reliability: 1228.0) & (original description: Putative SAMHD1, Description = Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, PFAM = PF01966)' T '35.1' 'not assigned.no ontology' 'niben101scf01155_555650-558556' '(at5g40270 : 186.0) HD domain-containing metal-dependent phosphohydrolase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607); BEST Arabidopsis thaliana protein match is: HD domain-containing metal-dependent phosphohydrolase family protein (TAIR:AT5G40290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37892 : 155.0) no description available & (reliability: 372.0) & (original description: Putative At5g40270, Description = HD domain-containing metal-dependent phosphohydrolase family protein isoform 1, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf01156_59037-64360' '(at5g12040 : 343.0) Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein; FUNCTIONS IN: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, zinc ion binding; INVOLVED IN: nitrogen compound metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010); BEST Arabidopsis thaliana protein match is: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein (TAIR:AT4G08790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36024 : 233.0) no description available & (gnl|cdd|30737 : 189.0) no description available & (q3hvn1|agub_soltu : 81.3) N-carbamoylputrescine amidase (EC 3.5.1.53) - Solanum tuberosum (Potato) & (reliability: 686.0) & (original description: Putative Nit2, Description = Omega-amidase NIT2, PFAM = PF00795)' T '35.1' 'not assigned.no ontology' 'niben101scf01157_202739-221864' '(at1g20540 : 567.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: DWD (DDB1-binding WD40 protein) hypersensitive to ABA 2 (TAIR:AT1G76260.1); Has 8926 Blast hits to 7393 proteins in 418 species: Archae - 0; Bacteria - 876; Metazoa - 3687; Fungi - 2097; Plants - 1353; Viruses - 0; Other Eukaryotes - 913 (source: NCBI BLink). & (gnl|cdd|36225 : 386.0) no description available & (reliability: 1134.0) & (original description: Putative DWA2, Description = WD repeat-containing protein DWA2, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf01166_139920-170229' '(at4g08310 : 159.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone chaperone domain CHZ (InterPro:IPR019098); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G44780.2); Has 53711 Blast hits to 33687 proteins in 1618 species: Archae - 142; Bacteria - 4400; Metazoa - 24303; Fungi - 6688; Plants - 2484; Viruses - 449; Other Eukaryotes - 15245 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative TCM_035094, Description = Uncharacterized protein isoform 2, PFAM = PF09649)' T '35.1' 'not assigned.no ontology' 'niben101scf01166_748504-753805' '(at1g21880 : 447.0) lysm domain GPI-anchored protein 1 precursor (LYM1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell wall macromolecule catabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Peptidoglycan-binding Lysin subgroup (InterPro:IPR002482); BEST Arabidopsis thaliana protein match is: Peptidoglycan-binding LysM domain-containing protein (TAIR:AT1G77630.1); Has 660 Blast hits to 639 proteins in 131 species: Archae - 0; Bacteria - 238; Metazoa - 0; Fungi - 1; Plants - 404; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 894.0) & (original description: Putative LYM1, Description = LysM domain-containing GPI-anchored protein 1, PFAM = PF01476;PF01476)' T '35.1' 'not assigned.no ontology' 'niben101scf01172_920281-923588' '(at1g14870 : 157.0) PLANT CADMIUM RESISTANCE 2 (PCR2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT5G35525.1); Has 803 Blast hits to 802 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 123; Fungi - 115; Plants - 527; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|86720 : 117.0) no description available & (reliability: 314.0) & (original description: Putative PCR3, Description = Protein PLANT CADMIUM RESISTANCE 3, PFAM = PF04749)' T '35.1' 'not assigned.no ontology' 'niben101scf01182_438764-443082' '(at5g14030 : 152.0) translocon-associated protein beta (TRAPB) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translocon-associated beta (InterPro:IPR008856); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38527 : 121.0) no description available & (gnl|cdd|69286 : 114.0) no description available & (reliability: 304.0) & (original description: Putative At5g14030, Description = Translocon-associated protein subunit beta, PFAM = PF05753)' T '35.1' 'not assigned.no ontology' 'niben101scf01184_852563-859610' '(at1g33780 : 350.0) Protein of unknown function (DUF179); LOCATED IN: chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF179 (InterPro:IPR003774); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF179) (TAIR:AT3G29240.2); Has 2552 Blast hits to 2552 proteins in 947 species: Archae - 0; Bacteria - 1880; Metazoa - 0; Fungi - 0; Plants - 126; Viruses - 0; Other Eukaryotes - 546 (source: NCBI BLink). & (gnl|cdd|86052 : 169.0) no description available & (reliability: 700.0) & (original description: Putative F14M2.10, Description = Putative uncharacterized protein At1g33780, PFAM = PF02622)' T '35.1' 'not assigned.no ontology' 'niben101scf01188_1070144-1073403' '(at3g59510 : 372.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT2G15320.1); Has 61362 Blast hits to 22329 proteins in 929 species: Archae - 22; Bacteria - 4305; Metazoa - 9233; Fungi - 496; Plants - 43466; Viruses - 3; Other Eukaryotes - 3837 (source: NCBI BLink). & (p93194|rpk1_iponi : 122.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35838 : 80.8) no description available & (reliability: 744.0) & (original description: Putative LRR, Description = Leucine-rich repeat protein, PFAM = PF13855;PF08263)' T '35.1' 'not assigned.no ontology' 'niben101scf01189_26061-32772' '(at4g36850 : 443.0) PQ-loop repeat family protein / transmembrane family protein; CONTAINS InterPro DOMAIN/s: Cystinosin/ERS1p repeat (InterPro:IPR006603); BEST Arabidopsis thaliana protein match is: PQ-loop repeat family protein / transmembrane family protein (TAIR:AT2G41050.1); Has 883 Blast hits to 635 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 204; Fungi - 499; Plants - 92; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|38124 : 110.0) no description available & (reliability: 886.0) & (original description: Putative BnaA01g01000D, Description = BnaA01g01000D protein, PFAM = PF04193;PF04193)' T '35.1' 'not assigned.no ontology' 'niben101scf01189_525349-531449' '(at3g02710 : 672.0) Encodes a protein with a putative role in mRNA splicing.; ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: RNA splicing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1716, eukaryotic (InterPro:IPR013180), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); Has 346 Blast hits to 342 proteins in 158 species: Archae - 0; Bacteria - 2; Metazoa - 149; Fungi - 94; Plants - 41; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|37945 : 469.0) no description available & (gnl|cdd|71650 : 124.0) no description available & (reliability: 1344.0) & (original description: Putative CTBL1, Description = CTBL1, PFAM = PF08216)' T '35.1' 'not assigned.no ontology' 'niben101scf01189_569479-580739' '(at3g02720 : 634.0) Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C56, PfpI (InterPro:IPR006286), ThiJ/PfpI (InterPro:IPR002818); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT2G38860.2); Has 9235 Blast hits to 5440 proteins in 1716 species: Archae - 384; Bacteria - 8047; Metazoa - 84; Fungi - 88; Plants - 239; Viruses - 0; Other Eukaryotes - 393 (source: NCBI BLink). & (gnl|cdd|28884 : 266.0) no description available & (gnl|cdd|37975 : 217.0) no description available & (reliability: 1268.0) & (original description: Putative DJ1D, Description = Protein DJ-1 homolog D, PFAM = PF01965;PF01965)' T '35.1' 'not assigned.no ontology' 'niben101scf01208_221017-248013' '(at2g41050 : 300.0) PQ-loop repeat family protein / transmembrane family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cystinosin/ERS1p repeat (InterPro:IPR006603); BEST Arabidopsis thaliana protein match is: PQ-loop repeat family protein / transmembrane family protein (TAIR:AT4G36850.1); Has 930 Blast hits to 673 proteins in 160 species: Archae - 0; Bacteria - 0; Metazoa - 218; Fungi - 545; Plants - 89; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (gnl|cdd|38124 : 102.0) no description available & (reliability: 600.0) & (original description: Putative At2g41050, Description = PQ-loop repeat family protein / transmembrane family protein, PFAM = PF04193;PF04193)' T '35.1' 'not assigned.no ontology' 'niben101scf01209_58919-62984' '(gnl|cdd|37003 : 161.0) no description available & (at3g54120 : 159.0) Reticulon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT3G19460.1); Has 661 Blast hits to 661 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 189; Fungi - 0; Plants - 460; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|66169 : 131.0) no description available & (reliability: 318.0) & (original description: Putative RTNLB12, Description = Reticulon-like protein B12, PFAM = PF02453)' T '35.1' 'not assigned.no ontology' 'niben101scf01220_130508-136321' '(at3g24730 : 247.0) mRNA splicing factor, thioredoxin-like U5 snRNP; FUNCTIONS IN: catalytic activity; INVOLVED IN: mitosis; LOCATED IN: spliceosomal complex; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), mRNA splicing factor, thioredoxin-like U5 snRNP (InterPro:IPR004123), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: mRNA splicing factor, thioredoxin-like U5 snRNP (TAIR:AT5G08290.1); Has 535 Blast hits to 535 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 213; Fungi - 146; Plants - 109; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|38624 : 178.0) no description available & (gnl|cdd|48535 : 171.0) no description available & (reliability: 494.0) & (original description: Putative TXNL4B, Description = Thioredoxin-like protein 4B, PFAM = PF02966)' T '35.1' 'not assigned.no ontology' 'niben101scf01220_297207-302890' '(at1g30890 : 409.0) Integral membrane HRF1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Hrf1 (InterPro:IPR005578); BEST Arabidopsis thaliana protein match is: Integral membrane HRF1 family protein (TAIR:AT3G59500.1); Has 474 Blast hits to 474 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 204; Fungi - 142; Plants - 75; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|38304 : 282.0) no description available & (gnl|cdd|67490 : 242.0) no description available & (reliability: 818.0) & (original description: Putative HRF1, Description = HRF1 protein, PFAM = PF03878)' T '35.1' 'not assigned.no ontology' 'niben101scf01220_305532-321673' '(at2g20210 : 427.0) RNI-like superfamily protein; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, ribonuclease inhibitor subtype (InterPro:IPR003590); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 854.0) & (original description: Putative BnaA07g00080D, Description = BnaA07g00080D protein, PFAM = PF00560;PF13516)' T '35.1' 'not assigned.no ontology' 'niben101scf01221_653361-660914' '(at1g04555 : 107.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G33380.1); Has 84 Blast hits to 83 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative BnaC05g02670D, Description = BnaC05g02670D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf01236_408777-423363' '(at5g18525 : 1490.0) protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Beige/BEACH (InterPro:IPR000409), Serine/threonine-protein kinase domain (InterPro:IPR002290), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Tyrosine-protein kinase, active site (InterPro:IPR008266), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein / beige-related (TAIR:AT2G45540.1); Has 6236 Blast hits to 5560 proteins in 402 species: Archae - 7; Bacteria - 1002; Metazoa - 1933; Fungi - 1317; Plants - 774; Viruses - 0; Other Eukaryotes - 1203 (source: NCBI BLink). & (gnl|cdd|36997 : 169.0) no description available & (gnl|cdd|85884 : 141.0) no description available & (reliability: 2980.0) & (original description: Putative lvsG, Description = WD repeat-containing protein 81, PFAM = PF00400;PF00400;PF02138)' T '35.1' 'not assigned.no ontology' 'niben101scf01247_496571-503877' '(at3g47560 : 358.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S33, tripeptidyl-peptidase C-terminal (InterPro:IPR013595); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G29840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39866 : 342.0) no description available & (reliability: 716.0) & (original description: Putative pco101788, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'niben101scf01249_130827-138566' '(at1g73480 : 493.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G18360.1); Has 6390 Blast hits to 6380 proteins in 1730 species: Archae - 36; Bacteria - 4672; Metazoa - 140; Fungi - 153; Plants - 452; Viruses - 63; Other Eukaryotes - 874 (source: NCBI BLink). & (gnl|cdd|36668 : 359.0) no description available & (gnl|cdd|32448 : 183.0) no description available & (reliability: 986.0) & (original description: Putative CSE16, Description = Caffeoyl shikimate esterase 16, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'niben101scf01249_316360-322075' '(at1g73820 : 333.0) Ssu72-like family protein; FUNCTIONS IN: phosphoprotein phosphatase activity; INVOLVED IN: mRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II subunit A (InterPro:IPR006811); Has 454 Blast hits to 453 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 228; Fungi - 149; Plants - 48; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|68300 : 285.0) no description available & (gnl|cdd|37635 : 278.0) no description available & (reliability: 666.0) & (original description: Putative ssu72, Description = RNA polymerase II subunit A C-terminal domain phosphatase SSU72, PFAM = PF04722)' T '35.1' 'not assigned.no ontology' 'niben101scf01252_490692-493495' '(at2g22180 : 87.0) hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT4G39745.1); Has 202 Blast hits to 201 proteins in 27 species: Archae - 0; Bacteria - 2; Metazoa - 9; Fungi - 3; Plants - 182; Viruses - 2; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative PGSC0003DMG400021819, Description = , PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf01256_121788-133077' '(at1g80710 : 452.0) Encodes a WD≠40 repeat family protein containing a DWD (DDB1 binding WD≠40) motif. Mutant analysis demonstrates that DRS1 promotes tolerance to drought stress, possibly mediated by ABA, and suggests involvement of DDB1≠ Cul4ñmediated protein degradation in drought response.; DROUGHT SENSITIVE 1 (DRS1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: damaged DNA binding 2 (TAIR:AT5G58760.1); Has 13978 Blast hits to 9952 proteins in 465 species: Archae - 46; Bacteria - 2948; Metazoa - 4636; Fungi - 3015; Plants - 1520; Viruses - 0; Other Eukaryotes - 1813 (source: NCBI BLink). & (gnl|cdd|39529 : 302.0) no description available & (gnl|cdd|29257 : 82.4) no description available & (reliability: 904.0) & (original description: Putative drs1, Description = Drought-sensitive 1 protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf01267_534830-560604' '(at1g44910 : 625.0) Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries.; pre-mRNA-processing protein 40A (PRP40A); CONTAINS InterPro DOMAIN/s: FF domain (InterPro:IPR002713), WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: pre-mRNA-processing protein 40B (TAIR:AT3G19670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35374 : 263.0) no description available & (gnl|cdd|34707 : 131.0) no description available & (reliability: 1250.0) & (original description: Putative PRP40A, Description = Pre-mRNA-processing protein 40A, PFAM = PF00397;PF00397;PF01846;PF01846;PF01846;PF01846)' T '35.1' 'not assigned.no ontology' 'niben101scf01269_316012-319043' '(at5g54880 : 162.0) DTW domain-containing protein; CONTAINS InterPro DOMAIN/s: DTW (InterPro:IPR005636); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67552 : 92.7) no description available & (gnl|cdd|39583 : 82.9) no description available & (reliability: 324.0) & (original description: Putative PGSC0003DMG400042605, Description = DTW domain protein, PFAM = PF03942)' T '35.1' 'not assigned.no ontology' 'niben101scf01269_576104-580919' '(at1g50660 : 588.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20350.1); Has 21445 Blast hits to 15134 proteins in 1325 species: Archae - 461; Bacteria - 2309; Metazoa - 11052; Fungi - 1737; Plants - 1035; Viruses - 42; Other Eukaryotes - 4809 (source: NCBI BLink). & (reliability: 1176.0) & (original description: Putative BnaC06g03880D, Description = BnaC06g03880D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf01276_595984-602503' '(at5g19290 : 474.0) alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G14980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36668 : 362.0) no description available & (gnl|cdd|32448 : 133.0) no description available & (reliability: 948.0) & (original description: Putative At5g19290, Description = Esterase/lipase/thioesterase family protein, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'niben101scf01281_110404-146087' '(at1g30680 : 875.0) toprim domain-containing protein; FUNCTIONS IN: DNA helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: DNA replication, DNA metabolic process; CONTAINS InterPro DOMAIN/s: Toprim domain, subgroup (InterPro:IPR006154), DNA helicase, DnaB-like, C-terminal (InterPro:IPR007694), Toprim domain (InterPro:IPR006171); BEST Arabidopsis thaliana protein match is: nucleic acid binding;nucleic acid binding (TAIR:AT1G30660.1); Has 1118 Blast hits to 1106 proteins in 217 species: Archae - 0; Bacteria - 270; Metazoa - 48; Fungi - 0; Plants - 77; Viruses - 127; Other Eukaryotes - 596 (source: NCBI BLink). & (gnl|cdd|29988 : 90.7) no description available & (reliability: 1750.0) & (original description: Putative At1g30680, Description = Twinkle homolog protein, chloroplastic/mitochondrial, PFAM = PF03796;PF13662)' T '35.1' 'not assigned.no ontology' 'niben101scf01291_174816-178578' '(at5g10860 : 314.0) Cystathionine beta-synthase (CBS) family protein; FUNCTIONS IN: cobalt ion binding; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT1G47271.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|73122 : 139.0) no description available & (reliability: 628.0) & (original description: Putative CBSX3, Description = CBS domain-containing protein CBSX3, mitochondrial, PFAM = PF00571;PF00571)' T '35.1' 'not assigned.no ontology' 'niben101scf01295_354401-360069' '(at5g18540 : 92.4) unknown protein; Has 1784 Blast hits to 634 proteins in 116 species: Archae - 0; Bacteria - 0; Metazoa - 1013; Fungi - 200; Plants - 288; Viruses - 0; Other Eukaryotes - 283 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative PGSC0003DMG400010658, Description = BnaA02g35110D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf01301_374359-377276' '(at3g48800 : 100.0) Sterile alpha motif (SAM) domain-containing protein; CONTAINS InterPro DOMAIN/s: Sterile alpha motif-type (InterPro:IPR013761), Sterile alpha motif (InterPro:IPR001660), Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 2 (InterPro:IPR011510); BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT5G23680.1); Has 394 Blast hits to 394 proteins in 73 species: Archae - 0; Bacteria - 19; Metazoa - 279; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative , Description = Protein bicaudal C isogeny 1, PFAM = PF00536)' T '35.1' 'not assigned.no ontology' 'niben101scf01305_348524-350864' '(at1g74340 : 106.0) dolichol phosphate-mannose biosynthesis regulatory protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: macromolecule biosynthetic process; LOCATED IN: integral to endoplasmic reticulum membrane, endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dolichol phosphate-mannose biosynthesis regulatory (InterPro:IPR009914); Has 224 Blast hits to 224 proteins in 115 species: Archae - 0; Bacteria - 0; Metazoa - 93; Fungi - 78; Plants - 25; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|38698 : 104.0) no description available & (gnl|cdd|70750 : 101.0) no description available & (reliability: 212.0) & (original description: Putative DPM2, Description = Dolichol phosphate-mannose biosynthesis regulatory protein, PFAM = PF07297)' T '35.1' 'not assigned.no ontology' 'niben101scf01328_77947-82033' '(at1g17200 : 214.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: protein binding; INVOLVED IN: response to karrikin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT3G14380.1). & (gnl|cdd|68120 : 113.0) no description available & (reliability: 428.0) & (original description: Putative f15, Description = CASP-like protein, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf01339_554372-564237' '(at2g31440 : 325.0) INVOLVED IN: positive regulation of catalytic activity, protein processing; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aph-1 (InterPro:IPR009294); Has 268 Blast hits to 262 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 212; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|69617 : 217.0) no description available & (gnl|cdd|39175 : 81.5) no description available & (reliability: 650.0) & (original description: Putative At2g31440, Description = Gamma-secretase subunit APH1-like, PFAM = PF06105)' T '35.1' 'not assigned.no ontology' 'niben101scf01341_292340-318171' '(at3g19508 : 102.0) unknown protein; LOCATED IN: mitochondrion; Has 34 Blast hits to 34 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative , Description = , PFAM = PF05347)' T '35.1' 'not assigned.no ontology' 'niben101scf01341_426579-435883' '(at4g34270 : 400.0) TIP41-like family protein; CONTAINS InterPro DOMAIN/s: TIP41-like protein (InterPro:IPR007303); Has 348 Blast hits to 346 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 123; Fungi - 127; Plants - 55; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|38434 : 273.0) no description available & (gnl|cdd|67776 : 209.0) no description available & (reliability: 800.0) & (original description: Putative At4g34270, Description = Putative uncharacterized protein At4g34270, PFAM = PF04176)' T '35.1' 'not assigned.no ontology' 'niben101scf01371_84477-96282' '(at5g42950 : 882.0) GYF domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GYF (InterPro:IPR003169); BEST Arabidopsis thaliana protein match is: GYF domain-containing protein (TAIR:AT1G24300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37073 : 87.5) no description available & (reliability: 1764.0) & (original description: Putative BnaAnng21680D, Description = Putative ovule protein, PFAM = PF02213)' T '35.1' 'not assigned.no ontology' 'niben101scf01371_328693-336006' '(at1g45170 : 284.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42960.1); Has 60 Blast hits to 60 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 568.0) & (original description: Putative OEP24B, Description = Outer envelope pore protein 24B, chloroplastic, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf01375_1041252-1047130' '(at1g79740 : 953.0) hAT transposon superfamily; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 899 Blast hits to 801 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 5; Plants - 875; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|68508 : 183.0) no description available & (reliability: 1906.0) & (original description: Putative Os01g0222700, Description = Os01g0222700 protein, PFAM = PF04937;PF02892;PF05699)' T '35.1' 'not assigned.no ontology' 'niben101scf01376_389032-394737' '(at2g43120 : 422.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: stem, flower; CONTAINS InterPro DOMAIN/s: Pirin, C-terminal (InterPro:IPR008778), Pirin (InterPro:IPR012093), Cupin, RmlC-type (InterPro:IPR011051), Pirin, N-terminal (InterPro:IPR003829); BEST Arabidopsis thaliana protein match is: pirin (TAIR:AT3G59220.1); Has 7357 Blast hits to 7357 proteins in 1454 species: Archae - 66; Bacteria - 4603; Metazoa - 71; Fungi - 219; Plants - 125; Viruses - 0; Other Eukaryotes - 2273 (source: NCBI BLink). & (gnl|cdd|31927 : 220.0) no description available & (reliability: 844.0) & (original description: Putative PRN2, Description = Pirin-like protein 2, PFAM = PF05726;PF02678)' T '35.1' 'not assigned.no ontology' 'niben101scf01380_384053-398682' '(at4g33180 : 338.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G21950.1); Has 8643 Blast hits to 8637 proteins in 1357 species: Archae - 85; Bacteria - 5901; Metazoa - 344; Fungi - 96; Plants - 652; Viruses - 2; Other Eukaryotes - 1563 (source: NCBI BLink). & (gnl|cdd|36667 : 145.0) no description available & (gnl|cdd|30941 : 103.0) no description available & (reliability: 676.0) & (original description: Putative BnaC01g04990D, Description = BnaC01g04990D protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf01383_1050186-1080168' '(at5g12290 : 620.0) Encodes a mitochondrial outer membrane protein, involved in galactoglycerolipid biosynthesis. The dgd1 mutant phenotype is suppressed in the dgs1 mutant background.; DGD1 SUPPRESSOR 1 (DGS1); INVOLVED IN: galactolipid biosynthetic process, hydrogen peroxide biosynthetic process; LOCATED IN: mitochondrial outer membrane, mitochondrion, protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear control of ATP synthase 2 (InterPro:IPR013946); Has 223 Blast hits to 223 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 125; Plants - 59; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|72062 : 194.0) no description available & (reliability: 1240.0) & (original description: Putative Os03g0377300, Description = Os03g0377300 protein, PFAM = PF08637)' T '35.1' 'not assigned.no ontology' 'niben101scf01392_176726-180602' '(at4g27740 : 134.0) Yippee family putative zinc-binding protein; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: Yippee family putative zinc-binding protein (TAIR:AT4G27745.1); Has 984 Blast hits to 980 proteins in 211 species: Archae - 0; Bacteria - 0; Metazoa - 457; Fungi - 211; Plants - 235; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (gnl|cdd|38609 : 131.0) no description available & (gnl|cdd|66871 : 130.0) no description available & (q8s5m8|yipl_orysa : 102.0) Putative yippee-like protein Os10g0369500 - Oryza sativa (Rice) & (reliability: 268.0) & (original description: Putative ypel, Description = Protein yippee-like, PFAM = PF03226)' T '35.1' 'not assigned.no ontology' 'niben101scf01409_468568-471875' '(at3g26040 : 243.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 2415 Blast hits to 2403 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 2353; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|66174 : 242.0) no description available & (o24645|hcbt1_diaca : 92.4) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 486.0) & (original description: Putative PGSC0003DMG400027462, Description = Vinorine synthase, PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'niben101scf01413_246328-254199' '(at4g21585 : 428.0) Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro.; endonuclease 4 (ENDO4); FUNCTIONS IN: endonuclease activity, nucleic acid binding; INVOLVED IN: DNA catabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Phospholipase C/P1 nuclease, core (InterPro:IPR008947), S1/P1 nuclease (InterPro:IPR003154); BEST Arabidopsis thaliana protein match is: endonuclease 5 (TAIR:AT4G21600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85937 : 381.0) no description available & (reliability: 856.0) & (original description: Putative ENDO4, Description = Endonuclease 4, PFAM = PF02265)' T '35.1' 'not assigned.no ontology' 'niben101scf01418_328483-344899' '(at2g25530 : 764.0) AFG1-like ATPase family protein; FUNCTIONS IN: ATPase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AFG1-like (InterPro:IPR005654); BEST Arabidopsis thaliana protein match is: AFG1-like ATPase family protein (TAIR:AT4G28070.2); Has 3822 Blast hits to 3815 proteins in 1065 species: Archae - 0; Bacteria - 1862; Metazoa - 150; Fungi - 200; Plants - 101; Viruses - 0; Other Eukaryotes - 1509 (source: NCBI BLink). & (gnl|cdd|37594 : 387.0) no description available & (gnl|cdd|31674 : 236.0) no description available & (reliability: 1528.0) & (original description: Putative BnaC08g33420D, Description = BnaC08g33420D protein, PFAM = PF03969)' T '35.1' 'not assigned.no ontology' 'niben101scf01422_167343-188370' '(at2g28320 : 941.0) Pleckstrin homology (PH) and lipid-binding START domains-containing protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769), Pleckstrin homology-type (InterPro:IPR011993), Lipid-binding START (InterPro:IPR002913), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Pleckstrin homology (PH) and lipid-binding START domains-containing protein (TAIR:AT3G54800.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70520 : 261.0) no description available & (reliability: 1882.0) & (original description: Putative At2g28320, Description = Pleckstrin homology (PH) and lipid-binding START domain-containing protein, PFAM = PF07059;PF00169;PF01852)' T '35.1' 'not assigned.no ontology' 'niben101scf01423_395319-399957' '(at2g03810 : 121.0) 18S pre-ribosomal assembly protein gar2-related; FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cotyledon; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative PGSC0003DMG400001936, Description = 18S pre-ribosomal assembly protein gar2-related protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf01427_33906-45292' '(at1g15740 : 465.0) Leucine-rich repeat family protein; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G23840.1); Has 38052 Blast hits to 19856 proteins in 856 species: Archae - 6; Bacteria - 8624; Metazoa - 11681; Fungi - 680; Plants - 12072; Viruses - 79; Other Eukaryotes - 4910 (source: NCBI BLink). & (reliability: 930.0) & (original description: Putative glysoja_031857, Description = F-box/LRR-repeat protein 14, PFAM = PF13855;PF13855;PF13516;PF13516;PF13516)' T '35.1' 'not assigned.no ontology' 'niben101scf01428_19391-24456' '(at1g68630 : 130.0) PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT1G58320.1); Has 753 Blast hits to 752 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 58; Plants - 553; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|86720 : 87.3) no description available & (reliability: 260.0) & (original description: Putative PCR12, Description = Protein PLANT CADMIUM RESISTANCE 12, PFAM = PF04749)' T '35.1' 'not assigned.no ontology' 'niben101scf01428_304325-309725' '(gnl|cdd|69058 : 171.0) no description available & (at4g14420 : 163.0) HR-like lesion-inducing protein-related; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HR-like lesion-inducer (InterPro:IPR008637); BEST Arabidopsis thaliana protein match is: HR-like lesion-inducing protein-related (TAIR:AT1G04340.1); Has 163 Blast hits to 163 proteins in 27 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative dl3250c, Description = AT4g14420/dl3250c, PFAM = PF05514)' T '35.1' 'not assigned.no ontology' 'niben101scf01433_397085-400359' '(at5g66330 : 416.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT2G15320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 99.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35665 : 90.1) no description available & (reliability: 832.0) & (original description: Putative At5g66330, Description = Leucine-rich repeat-containing protein, PFAM = PF00560;PF13855;PF13855)' T '35.1' 'not assigned.no ontology' 'niben101scf01438_354674-367658' '(at2g18840 : 296.0) Integral membrane Yip1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Yip1 domain (InterPro:IPR006977); BEST Arabidopsis thaliana protein match is: Integral membrane Yip1 family protein (TAIR:AT4G30260.1); Has 825 Blast hits to 825 proteins in 200 species: Archae - 0; Bacteria - 0; Metazoa - 402; Fungi - 189; Plants - 114; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|38157 : 237.0) no description available & (gnl|cdd|86741 : 105.0) no description available & (reliability: 592.0) & (original description: Putative B456_009G118100, Description = Protein YIPF, PFAM = PF04893)' T '35.1' 'not assigned.no ontology' 'niben101scf01451_705381-709389' '(at5g10860 : 312.0) Cystathionine beta-synthase (CBS) family protein; FUNCTIONS IN: cobalt ion binding; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT1G47271.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|73122 : 138.0) no description available & (reliability: 624.0) & (original description: Putative adh1F, Description = CBS domain-containing protein CBSX3, mitochondrial, PFAM = PF00571;PF00571)' T '35.1' 'not assigned.no ontology' 'niben101scf01463_12659-29019' '(at3g20270 : 281.0) lipid-binding serum glycoprotein family protein; FUNCTIONS IN: lipid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bactericidal permeability-increasing protein, alpha/beta domain (InterPro:IPR017943), F-box domain, Skp2-like (InterPro:IPR022364), Lipid-binding serum glycoprotein, N-terminal (InterPro:IPR017942), Lipid-binding serum glycoprotein, C-terminal (InterPro:IPR001124); BEST Arabidopsis thaliana protein match is: lipid-binding serum glycoprotein family protein (TAIR:AT1G04970.1). & (reliability: 562.0) & (original description: Putative At3g20270, Description = Lipid-binding serum glycoprotein family protein, PFAM = PF12937)' T '35.1' 'not assigned.no ontology' 'niben101scf01466_202466-208390' '(at5g65280 : 571.0) Encodes a protein with reported similarity to GCR2 a putative G protein coupled receptor thought to be an ABA receptor. Loss of function mutations in GCL1 show no ABA response defects based on assays of seed germination and seedling development.GCL1 also has similarity to LANCL1 and LANCL2, human homologs of bacterial lanthionine synthetase.; GCR2-like 1 (GCL1); FUNCTIONS IN: catalytic activity; INVOLVED IN: response to salt stress; LOCATED IN: extrinsic to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LanC-like protein, eukaryotic (InterPro:IPR020464), Six-hairpin glycosidase-like (InterPro:IPR008928), Lanthionine synthetase C-like (InterPro:IPR007822); BEST Arabidopsis thaliana protein match is: G protein coupled receptor (TAIR:AT1G52920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37998 : 444.0) no description available & (gnl|cdd|86797 : 291.0) no description available & (reliability: 1142.0) & (original description: Putative GCL1, Description = LanC-like protein GCL1, PFAM = PF05147)' T '35.1' 'not assigned.no ontology' 'niben101scf01469_507052-520590' '(at2g15730 : 459.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G34420.1); Has 149 Blast hits to 147 proteins in 26 species: Archae - 0; Bacteria - 31; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 878.0) & (original description: Putative PGSC0003DMG400015774, Description = Sulfotransferase, PFAM = PF00685)' T '35.1' 'not assigned.no ontology' 'niben101scf01486_344339-352698' '(at4g35140 : 385.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G38480.1); Has 10094 Blast hits to 7474 proteins in 477 species: Archae - 10; Bacteria - 1944; Metazoa - 3788; Fungi - 2083; Plants - 884; Viruses - 0; Other Eukaryotes - 1385 (source: NCBI BLink). & (gnl|cdd|36548 : 324.0) no description available & (gnl|cdd|29257 : 87.4) no description available & (reliability: 770.0) & (original description: Putative pc326, Description = DDB1-and CUL4-associated factor 8, PFAM = PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf01486_344375-352692' '(at4g35140 : 414.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G38480.1); Has 10094 Blast hits to 7474 proteins in 477 species: Archae - 10; Bacteria - 1944; Metazoa - 3788; Fungi - 2083; Plants - 884; Viruses - 0; Other Eukaryotes - 1385 (source: NCBI BLink). & (gnl|cdd|36548 : 350.0) no description available & (gnl|cdd|29257 : 80.4) no description available & (reliability: 828.0) & (original description: Putative pc326, Description = DDB1-and CUL4-associated factor 8, PFAM = PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf01486_525204-532862' '(at2g16860 : 338.0) GCIP-interacting family protein; CONTAINS InterPro DOMAIN/s: mRNA splicing factor SYF2 (InterPro:IPR013260); Has 2586 Blast hits to 2013 proteins in 293 species: Archae - 27; Bacteria - 123; Metazoa - 700; Fungi - 265; Plants - 138; Viruses - 7; Other Eukaryotes - 1326 (source: NCBI BLink). & (gnl|cdd|37820 : 150.0) no description available & (gnl|cdd|71665 : 138.0) no description available & (reliability: 676.0) & (original description: Putative At2g16860, Description = Expressed protein, PFAM = PF08231)' T '35.1' 'not assigned.no ontology' 'niben101scf01496_60768-64846' '(at5g58770 : 322.0) Undecaprenyl pyrophosphate synthetase family protein; FUNCTIONS IN: dehydrodolichyl diphosphate synthase activity; INVOLVED IN: dolichol biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Di-trans-poly-cis-decaprenylcistransferase-like, conserved site (InterPro:IPR018520), Di-trans-poly-cis-decaprenylcistransferase-like (InterPro:IPR001441); BEST Arabidopsis thaliana protein match is: Undecaprenyl pyrophosphate synthetase family protein (TAIR:AT5G58782.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30370 : 284.0) no description available & (gnl|cdd|36815 : 259.0) no description available & (reliability: 644.0) & (original description: Putative ispU, Description = Alkyl transferase, PFAM = PF01255)' T '35.1' 'not assigned.no ontology' 'niben101scf01497_301257-305107' '(at2g17570 : 316.0) Undecaprenyl pyrophosphate synthetase family protein; FUNCTIONS IN: transferase activity, transferring alkyl or aryl (other than methyl) groups; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Di-trans-poly-cis-decaprenylcistransferase-like, conserved site (InterPro:IPR018520), Di-trans-poly-cis-decaprenylcistransferase-like (InterPro:IPR001441); BEST Arabidopsis thaliana protein match is: Undecaprenyl pyrophosphate synthetase family protein (TAIR:AT5G60510.1); Has 9017 Blast hits to 8995 proteins in 2779 species: Archae - 230; Bacteria - 5298; Metazoa - 197; Fungi - 223; Plants - 211; Viruses - 0; Other Eukaryotes - 2858 (source: NCBI BLink). & (gnl|cdd|36815 : 279.0) no description available & (gnl|cdd|29593 : 217.0) no description available & (reliability: 632.0) & (original description: Putative CPT, Description = Alkyl transferase, PFAM = PF01255)' T '35.1' 'not assigned.no ontology' 'niben101scf01497_302223-305071' '(at2g17570 : 324.0) Undecaprenyl pyrophosphate synthetase family protein; FUNCTIONS IN: transferase activity, transferring alkyl or aryl (other than methyl) groups; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Di-trans-poly-cis-decaprenylcistransferase-like, conserved site (InterPro:IPR018520), Di-trans-poly-cis-decaprenylcistransferase-like (InterPro:IPR001441); BEST Arabidopsis thaliana protein match is: Undecaprenyl pyrophosphate synthetase family protein (TAIR:AT5G60510.1); Has 9017 Blast hits to 8995 proteins in 2779 species: Archae - 230; Bacteria - 5298; Metazoa - 197; Fungi - 223; Plants - 211; Viruses - 0; Other Eukaryotes - 2858 (source: NCBI BLink). & (gnl|cdd|36815 : 282.0) no description available & (gnl|cdd|29593 : 215.0) no description available & (reliability: 648.0) & (original description: Putative CPT, Description = Alkyl transferase, PFAM = PF01255)' T '35.1' 'not assigned.no ontology' 'niben101scf01497_309470-312330' '(at2g17570 : 337.0) Undecaprenyl pyrophosphate synthetase family protein; FUNCTIONS IN: transferase activity, transferring alkyl or aryl (other than methyl) groups; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Di-trans-poly-cis-decaprenylcistransferase-like, conserved site (InterPro:IPR018520), Di-trans-poly-cis-decaprenylcistransferase-like (InterPro:IPR001441); BEST Arabidopsis thaliana protein match is: Undecaprenyl pyrophosphate synthetase family protein (TAIR:AT5G60510.1); Has 9017 Blast hits to 8995 proteins in 2779 species: Archae - 230; Bacteria - 5298; Metazoa - 197; Fungi - 223; Plants - 211; Viruses - 0; Other Eukaryotes - 2858 (source: NCBI BLink). & (gnl|cdd|36815 : 280.0) no description available & (gnl|cdd|29593 : 215.0) no description available & (reliability: 674.0) & (original description: Putative At2g17570, Description = Dehydrodolichyl diphosphate synthase 6, PFAM = PF01255)' T '35.1' 'not assigned.no ontology' 'niben101scf01506_299649-306106' '(at2g32150 : 312.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Pyrimidine 5-nucleotidase (InterPro:IPR010237), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G02230.2); Has 2392 Blast hits to 2391 proteins in 515 species: Archae - 15; Bacteria - 775; Metazoa - 2; Fungi - 155; Plants - 196; Viruses - 0; Other Eukaryotes - 1249 (source: NCBI BLink). & (gnl|cdd|38319 : 255.0) no description available & (reliability: 624.0) & (original description: Putative nod33, Description = Putative phosphatase, PFAM = PF13419)' T '35.1' 'not assigned.no ontology' 'niben101scf01518_58849-66917' '(at1g68260 : 234.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT1G68280.1); Has 2036 Blast hits to 2035 proteins in 690 species: Archae - 16; Bacteria - 1416; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 524 (source: NCBI BLink). & (gnl|cdd|31166 : 95.7) no description available & (reliability: 468.0) & (original description: Putative ALT3, Description = Acyl-acyl carrier protein thioesterase ATL3, chloroplastic, PFAM = PF13279)' T '35.1' 'not assigned.no ontology' 'niben101scf01521_167523-174296' '(at1g13690 : 229.0) AtE1 - stimulates the ATPase activity of DnaK/DnaJ; ATPase E1 (ATE1); FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 3 (TAIR:AT5G61030.1); Has 14554 Blast hits to 12500 proteins in 724 species: Archae - 8; Bacteria - 1323; Metazoa - 7103; Fungi - 1824; Plants - 2936; Viruses - 0; Other Eukaryotes - 1360 (source: NCBI BLink). & (gnl|cdd|35334 : 197.0) no description available & (reliability: 458.0) & (original description: Putative ATE1, Description = ATPase E1, PFAM = PF00076)' T '35.1' 'not assigned.no ontology' 'niben101scf01521_1235060-1241704' '(at5g62740 : 397.0) HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1 (HIR1); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT1G69840.7); Has 5648 Blast hits to 5647 proteins in 1784 species: Archae - 171; Bacteria - 3783; Metazoa - 267; Fungi - 306; Plants - 270; Viruses - 3; Other Eukaryotes - 848 (source: NCBI BLink). & (gnl|cdd|48219 : 313.0) no description available & (gnl|cdd|37831 : 302.0) no description available & (reliability: 794.0) & (original description: Putative hflK, Description = Protease, PFAM = PF01145)' T '35.1' 'not assigned.no ontology' 'niben101scf01526_662708-672582' '(at3g54380 : 364.0) SAC3/GANP/Nin1/mts3/eIF-3 p25 family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); BEST Arabidopsis thaliana protein match is: SAC3/GANP/Nin1/mts3/eIF-3 p25 family (TAIR:AT3G06290.1). & (gnl|cdd|37071 : 161.0) no description available & (gnl|cdd|34683 : 134.0) no description available & (reliability: 728.0) & (original description: Putative , Description = , PFAM = PF03399)' T '35.1' 'not assigned.no ontology' 'niben101scf01576_338457-352318' '(at3g09850 : 355.0) D111/G-patch domain-containing protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: D111/G-patch (InterPro:IPR000467); BEST Arabidopsis thaliana protein match is: GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain (TAIR:AT1G17070.1); Has 4043 Blast hits to 2784 proteins in 353 species: Archae - 19; Bacteria - 864; Metazoa - 1783; Fungi - 478; Plants - 347; Viruses - 9; Other Eukaryotes - 543 (source: NCBI BLink). & (gnl|cdd|37395 : 148.0) no description available & (reliability: 710.0) & (original description: Putative BnaA05g28700D, Description = BnaA05g28700D protein, PFAM = PF01424;PF01585;PF01585)' T '35.1' 'not assigned.no ontology' 'niben101scf01577_23089-26840' '(at1g59650 : 161.0) Encodes CW14.; CW14; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT1G10410.1); Has 261 Blast hits to 261 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|70520 : 97.4) no description available & (reliability: 322.0) & (original description: Putative CW14, Description = AT3G29180 protein, PFAM = PF07059)' T '35.1' 'not assigned.no ontology' 'niben101scf01582_488166-493981' '(at5g19820 : 260.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37382 : 144.0) no description available & (reliability: 520.0) & (original description: Putative emb2734, Description = Importin-5, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf01587_124911-136262' '(at1g50510 : 429.0) indigoidine synthase A family protein; INVOLVED IN: biological_process unknown; LOCATED IN: peroxisome, plasma membrane; CONTAINS InterPro DOMAIN/s: Indigoidine synthase A like protein (InterPro:IPR007342); Has 1680 Blast hits to 1674 proteins in 598 species: Archae - 0; Bacteria - 980; Metazoa - 68; Fungi - 108; Plants - 51; Viruses - 0; Other Eukaryotes - 473 (source: NCBI BLink). & (gnl|cdd|86584 : 404.0) no description available & (gnl|cdd|38219 : 362.0) no description available & (reliability: 858.0) & (original description: Putative psuG, Description = Pseudouridine-5'-phosphate glycosidase, PFAM = PF04227)' T '35.1' 'not assigned.no ontology' 'niben101scf01591_136432-141988' '(at4g25830 : 108.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G35760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative XL3, Description = CASP-like protein, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf01592_73168-75602' '(at2g20830 : 118.0) transferases;folic acid binding; FUNCTIONS IN: folic acid binding, transferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Formiminotransferase, N-terminal subdomain (InterPro:IPR012886), Formiminotransferas, N- and C-terminal subdomains (InterPro:IPR022384). & (gnl|cdd|87464 : 95.4) no description available & (gnl|cdd|39795 : 88.5) no description available & (reliability: 236.0) & (original description: Putative Sb10g027700, Description = Putative uncharacterized protein Sb10g027700, PFAM = PF09811)' T '35.1' 'not assigned.no ontology' 'niben101scf01594_805247-815713' '(at5g08500 : 834.0) Transmembrane CLPTM1 family protein; CONTAINS InterPro DOMAIN/s: Cleft lip and palate transmembrane 1 (InterPro:IPR008429); BEST Arabidopsis thaliana protein match is: Transmembrane CLPTM1 family protein (TAIR:AT5G23575.1); Has 489 Blast hits to 489 proteins in 171 species: Archae - 0; Bacteria - 0; Metazoa - 235; Fungi - 77; Plants - 58; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (gnl|cdd|37700 : 723.0) no description available & (gnl|cdd|69141 : 699.0) no description available & (reliability: 1668.0) & (original description: Putative clptm1, Description = Cleft lip and palate transmembrane protein 1 homolog, PFAM = PF05602)' T '35.1' 'not assigned.no ontology' 'niben101scf01596_1220177-1225712' '(at1g16880 : 352.0) uridylyltransferase-related; INVOLVED IN: response to cold; LOCATED IN: chloroplast thylakoid membrane, stromule, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: ACT domain-containing protein (TAIR:AT5G04740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 704.0) & (original description: Putative ACR11, Description = ACT domain-containing protein ACR11, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf01599_259418-269516' '(at1g10950 : 885.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis.; transmembrane nine 1 (TMN1); LOCATED IN: integral to membrane, Golgi apparatus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G37310.1); Has 1611 Blast hits to 1538 proteins in 326 species: Archae - 0; Bacteria - 16; Metazoa - 610; Fungi - 273; Plants - 454; Viruses - 0; Other Eukaryotes - 258 (source: NCBI BLink). & (gnl|cdd|36491 : 832.0) no description available & (gnl|cdd|66650 : 572.0) no description available & (reliability: 1770.0) & (original description: Putative TMN1, Description = Transmembrane 9 superfamily member 1, PFAM = PF02990)' T '35.1' 'not assigned.no ontology' 'niben101scf01604_179967-183274' '(gnl|cdd|66174 : 253.0) no description available & (at3g26040 : 238.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 2415 Blast hits to 2403 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 2353; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 476.0) & (original description: Putative catf2, Description = Acyl-transferase, PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'niben101scf01611_690299-699270' '(at2g25830 : 331.0) YebC-related; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF28 (InterPro:IPR002876), Integrase, N-terminal zinc-binding domain-like (InterPro:IPR017856); Has 8692 Blast hits to 8692 proteins in 2830 species: Archae - 0; Bacteria - 6166; Metazoa - 76; Fungi - 120; Plants - 47; Viruses - 0; Other Eukaryotes - 2283 (source: NCBI BLink). & (gnl|cdd|38183 : 246.0) no description available & (gnl|cdd|85626 : 218.0) no description available & (reliability: 662.0) & (original description: Putative At2g25830, Description = Probable transcriptional regulatory protein At2g25830, PFAM = PF01709)' T '35.1' 'not assigned.no ontology' 'niben101scf01623_167827-177468' '(at1g14620 : 308.0) DECOY (DECOY); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L46 (InterPro:IPR021757); Has 231 Blast hits to 231 proteins in 117 species: Archae - 0; Bacteria - 2; Metazoa - 68; Fungi - 103; Plants - 44; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|39748 : 164.0) no description available & (reliability: 616.0) & (original description: Putative DECOY, Description = At1g14620/T5E21_15, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf01631_222254-225627' '(at5g09620 : 177.0) Octicosapeptide/Phox/Bem1p family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT5G64430.1); Has 18668 Blast hits to 11149 proteins in 562 species: Archae - 0; Bacteria - 597; Metazoa - 7421; Fungi - 2059; Plants - 1927; Viruses - 138; Other Eukaryotes - 6526 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative At1g16270, Description = Octicosapeptide/Phox/Bem1p domain-containing protein kinase, PFAM = PF00564)' T '35.1' 'not assigned.no ontology' 'niben101scf01640_88123-91244' '(at1g66680 : 132.0) unknown function; AR401; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 12 (InterPro:IPR013217); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G60910.1); Has 1054 Blast hits to 1053 proteins in 391 species: Archae - 16; Bacteria - 384; Metazoa - 157; Fungi - 144; Plants - 125; Viruses - 0; Other Eukaryotes - 228 (source: NCBI BLink). & (gnl|cdd|36485 : 83.8) no description available & (reliability: 264.0) & (original description: Putative AR401, Description = Protein-lysine N-methyltransferase AMTR_s00105p00145330, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf01653_190828-197462' '(at2g37730 : 561.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT3G11420.1); Has 511 Blast hits to 500 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 144; Plants - 279; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|68226 : 314.0) no description available & (gnl|cdd|37457 : 263.0) no description available & (reliability: 1122.0) & (original description: Putative At2g37730, Description = Glycosyltransferase, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben101scf01656_58828-68002' '(at4g27585 : 467.0) SPFH/Band 7/PHB domain-containing membrane-associated protein family; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, membrane; EXPRESSED IN: callus, leaf; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT5G54100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37831 : 387.0) no description available & (gnl|cdd|48215 : 261.0) no description available & (reliability: 934.0) & (original description: Putative hflC, Description = Putative membrane protease, stomatin/prohibitin-like protein, PFAM = PF16200;PF01145)' T '35.1' 'not assigned.no ontology' 'niben101scf01661_115979-121753' '(at3g56840 : 439.0) FAD-dependent oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076); Has 4748 Blast hits to 4741 proteins in 1463 species: Archae - 76; Bacteria - 3210; Metazoa - 112; Fungi - 136; Plants - 47; Viruses - 1; Other Eukaryotes - 1166 (source: NCBI BLink). & (gnl|cdd|37876 : 300.0) no description available & (gnl|cdd|30924 : 213.0) no description available & (reliability: 878.0) & (original description: Putative lhgO, Description = L-2-hydroxyglutarate oxidase LhgO, PFAM = PF01266)' T '35.1' 'not assigned.no ontology' 'niben101scf01664_380581-387011' '(at4g15093 : 349.0) catalytic LigB subunit of aromatic ring-opening dioxygenase family; FUNCTIONS IN: oxidoreductase activity, ferrous iron binding, zinc ion binding, oxidoreductase activity, acting on single donors with incorporation of molecular oxygen; INVOLVED IN: oxidation reduction, cellular aromatic compound metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Extradiol aromatic ring-opening dioxygenase, DODA type (InterPro:IPR014436), Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B (InterPro:IPR004183); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86174 : 227.0) no description available & (reliability: 698.0) & (original description: Putative LIGB, Description = Extradiol ring-cleavage dioxygenase, PFAM = PF02900)' T '35.1' 'not assigned.no ontology' 'niben101scf01677_58842-93360' '(at3g02700 : 172.0) NC domain-containing protein-related; CONTAINS InterPro DOMAIN/s: NC (InterPro:IPR007053); BEST Arabidopsis thaliana protein match is: NC domain-containing protein-related (TAIR:AT5G16360.1); Has 186 Blast hits to 185 proteins in 40 species: Archae - 0; Bacteria - 31; Metazoa - 10; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative At5g06370, Description = Lecithin retinol acyltransferase, PFAM = PF04970)' T '35.1' 'not assigned.no ontology' 'niben101scf01678_376167-381061' '(at5g41460 : 727.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT4G23490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68226 : 452.0) no description available & (gnl|cdd|37457 : 293.0) no description available & (reliability: 1454.0) & (original description: Putative BnaA01g13090D, Description = BnaA01g13090D protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben101scf01681_1354182-1362052' '(at2g38740 : 291.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G56500.1); Has 17978 Blast hits to 17978 proteins in 2581 species: Archae - 265; Bacteria - 14433; Metazoa - 167; Fungi - 429; Plants - 387; Viruses - 3; Other Eukaryotes - 2294 (source: NCBI BLink). & (gnl|cdd|30982 : 149.0) no description available & (gnl|cdd|38125 : 125.0) no description available & (reliability: 582.0) & (original description: Putative SGPP, Description = Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp, PFAM = PF13419)' T '35.1' 'not assigned.no ontology' 'niben101scf01683_131512-137271' '(at5g04420 : 394.0) Galactose oxidase/kelch repeat superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 4 (TAIR:AT3G05420.1); Has 8531 Blast hits to 4263 proteins in 348 species: Archae - 19; Bacteria - 246; Metazoa - 3206; Fungi - 1070; Plants - 1911; Viruses - 10; Other Eukaryotes - 2069 (source: NCBI BLink). & (gnl|cdd|35600 : 207.0) no description available & (reliability: 788.0) & (original description: Putative ACBP4, Description = Acyl-CoA-binding domain-containing protein 4, PFAM = PF07646;PF01344;PF13415)' T '35.1' 'not assigned.no ontology' 'niben101scf01684_191344-195455' '(at1g34770 : 251.0) CONTAINS InterPro DOMAIN/s: MAGE protein (InterPro:IPR002190); Has 1274 Blast hits to 1260 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 1104; Fungi - 45; Plants - 49; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|85465 : 108.0) no description available & (gnl|cdd|39762 : 93.9) no description available & (reliability: 502.0) & (original description: Putative MAGE, Description = , PFAM = PF01454)' T '35.1' 'not assigned.no ontology' 'niben101scf01684_276602-280844' '(at2g45010 : 254.0) PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT5G51400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86720 : 90.8) no description available & (reliability: 508.0) & (original description: Putative CNR6, Description = Cell number regulator 6, PFAM = PF04749)' T '35.1' 'not assigned.no ontology' 'niben101scf01688_307503-312498' '(at3g03590 : 122.0) SWIB/MDM2 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121), SWIB domain (InterPro:IPR019835); BEST Arabidopsis thaliana protein match is: SWIB/MDM2 domain superfamily protein (TAIR:AT2G35605.1); Has 1268 Blast hits to 1165 proteins in 257 species: Archae - 0; Bacteria - 219; Metazoa - 186; Fungi - 200; Plants - 424; Viruses - 10; Other Eukaryotes - 229 (source: NCBI BLink). & (gnl|cdd|37157 : 113.0) no description available & (gnl|cdd|85905 : 109.0) no description available & (reliability: 244.0) & (original description: Putative pco097858, Description = SWIb domain-containing protein, PFAM = PF02201)' T '35.1' 'not assigned.no ontology' 'niben101scf01689_751136-760128' '(at5g28750 : 98.2) Bacterial sec-independent translocation protein mttA/Hcf106; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, protein transport; LOCATED IN: chloroplast thylakoid membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial sec-independent translocation protein mttA/Hcf106 (InterPro:IPR003369), Twin-arginine translocation protein TatA/E (InterPro:IPR006312); BEST Arabidopsis thaliana protein match is: Bacterial sec-independent translocation protein mttA/Hcf106 (TAIR:AT5G52440.1); Has 3112 Blast hits to 3112 proteins in 1115 species: Archae - 68; Bacteria - 2578; Metazoa - 0; Fungi - 0; Plants - 106; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative tatA, Description = Sec-independent protein translocase protein TatA, PFAM = PF02416)' T '35.1' 'not assigned.no ontology' 'niben101scf01695_32591-37928' '(at2g35760 : 220.0) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT4G16442.1); Has 688 Blast hits to 688 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 688; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68120 : 112.0) no description available & (reliability: 440.0) & (original description: Putative GSVIVT00013502001, Description = CASP-like protein 2B1, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf01697_62264-83679' '(at1g25210 : 376.0) UDP-3-O-acyl N-acetylglycosamine deacetylase family protein; FUNCTIONS IN: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity; INVOLVED IN: lipid A biosynthetic process; CONTAINS InterPro DOMAIN/s: UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal (InterPro:IPR015870), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), UDP-3-O-acyl N-acetylglucosamine deacetylase (InterPro:IPR004463), UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (InterPro:IPR011334); BEST Arabidopsis thaliana protein match is: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein (TAIR:AT1G24793.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86297 : 259.0) no description available & (reliability: 752.0) & (original description: Putative LPXC1, Description = Probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, PFAM = PF03331)' T '35.1' 'not assigned.no ontology' 'niben101scf01718_806384-810977' '(at4g35140 : 563.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G38480.1); Has 10094 Blast hits to 7474 proteins in 477 species: Archae - 10; Bacteria - 1944; Metazoa - 3788; Fungi - 2083; Plants - 884; Viruses - 0; Other Eukaryotes - 1385 (source: NCBI BLink). & (gnl|cdd|36548 : 488.0) no description available & (gnl|cdd|29257 : 91.2) no description available & (reliability: 1126.0) & (original description: Putative dcaf8, Description = DDB1-and CUL4-associated factor 8, PFAM = PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf01727_96677-101419' '(at5g62740 : 498.0) HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1 (HIR1); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT1G69840.7); Has 5648 Blast hits to 5647 proteins in 1784 species: Archae - 171; Bacteria - 3783; Metazoa - 267; Fungi - 306; Plants - 270; Viruses - 3; Other Eukaryotes - 848 (source: NCBI BLink). & (gnl|cdd|37831 : 376.0) no description available & (gnl|cdd|48219 : 359.0) no description available & (reliability: 996.0) & (original description: Putative hir2, Description = Hypersensitive-induced reaction protein 2, PFAM = PF01145)' T '35.1' 'not assigned.no ontology' 'niben101scf01727_825532-828158' '(at3g54200 : 139.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT3G05975.1); Has 631 Blast hits to 630 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 631; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative PGSC0003DMG400020863, Description = Late embryogenesis abundant protein, LEA-14, PFAM = PF03168)' T '35.1' 'not assigned.no ontology' 'niben101scf01731_236131-245867' '(at1g12390 : 174.0) Cornichon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular signaling pathway; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Cornichon (InterPro:IPR003377); BEST Arabidopsis thaliana protein match is: Cornichon family protein (TAIR:AT1G12340.1); Has 617 Blast hits to 617 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 324; Fungi - 159; Plants - 93; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|37940 : 136.0) no description available & (gnl|cdd|66954 : 89.5) no description available & (reliability: 348.0) & (original description: Putative At1g12390, Description = Protein cornichon homolog 4, PFAM = PF03311)' T '35.1' 'not assigned.no ontology' 'niben101scf01731_1103127-1116384' '(at2g35710 : 649.0) Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process, biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G16600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37161 : 90.6) no description available & (reliability: 1298.0) & (original description: Putative PGSIP8, Description = Putative glucuronosyltransferase PGSIP8, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf01750_1467071-1471569' '(at2g36100 : 146.0) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT3G11550.1); Has 599 Blast hits to 599 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 599; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68120 : 131.0) no description available & (reliability: 292.0) & (original description: Putative STG, Description = CASP-like protein, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf01752_269464-272198' '(gnl|cdd|38367 : 140.0) no description available & (at4g26860 : 138.0) Predicted pyridoxal phosphate-dependent enzyme, YBL036C type; FUNCTIONS IN: pyridoxal phosphate binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Predicted pyridoxal phosphate-dependent enzyme, YBL036C type (InterPro:IPR011078), Alanine racemase, N-terminal (InterPro:IPR001608); BEST Arabidopsis thaliana protein match is: Predicted pyridoxal phosphate-dependent enzyme, YBL036C type (TAIR:AT1G11930.2). & (gnl|cdd|29733 : 121.0) no description available & (reliability: 276.0) & (original description: Putative yggS, Description = Pyridoxal phosphate enzyme, YggS family, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf01764_84915-91803' '(at1g51730 : 250.0) Ubiquitin-conjugating enzyme family protein; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), RWD (InterPro:IPR006575); Has 930 Blast hits to 928 proteins in 205 species: Archae - 0; Bacteria - 2; Metazoa - 543; Fungi - 220; Plants - 66; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (gnl|cdd|39221 : 137.0) no description available & (gnl|cdd|86949 : 84.3) no description available & (reliability: 500.0) & (original description: Putative KK1_000266, Description = RWD domain-containing protein 1, PFAM = PF05773)' T '35.1' 'not assigned.no ontology' 'niben101scf01773_617686-692667' '(at3g62160 : 372.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G28680.1); Has 2278 Blast hits to 2266 proteins in 115 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 12; Plants - 2263; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|66174 : 210.0) no description available & (o24645|hcbt1_diaca : 124.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 744.0) & (original description: Putative glysoja_028567, Description = 10-deacetylbaccatin III 10-O-acetyltransferase, PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'niben101scf01785_586748-599311' '(at1g29850 : 115.0) double-stranded DNA-binding family protein; FUNCTIONS IN: double-stranded DNA binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding TFAR19-related protein (InterPro:IPR002836); Has 679 Blast hits to 679 proteins in 318 species: Archae - 256; Bacteria - 0; Metazoa - 134; Fungi - 121; Plants - 56; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|38641 : 96.2) no description available & (reliability: 230.0) & (original description: Putative pdcd5, Description = Programmed cell death 5, PFAM = PF01984)' T '35.1' 'not assigned.no ontology' 'niben101scf01789_213598-221733' '(at2g22650 : 456.0) FAD-dependent oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|31009 : 91.9) no description available & (reliability: 912.0) & (original description: Putative At2g22650, Description = FAD-dependent oxidoreductase-like protein, PFAM = PF01266)' T '35.1' 'not assigned.no ontology' 'niben101scf01814_515203-544777' '(at3g50590 : 2322.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); Has 1315 Blast hits to 1225 proteins in 269 species: Archae - 0; Bacteria - 270; Metazoa - 540; Fungi - 221; Plants - 139; Viruses - 13; Other Eukaryotes - 132 (source: NCBI BLink). & (reliability: 4644.0) & (original description: Putative At3g50590, Description = Transducin/WD40 domain-containing protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf01825_297332-300204' '(gnl|cdd|28751 : 216.0) no description available & (at4g39730 : 203.0) Lipase/lipooxygenase, PLAT/LH2 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976); BEST Arabidopsis thaliana protein match is: Lipase/lipooxygenase, PLAT/LH2 family protein (TAIR:AT2G22170.1); Has 247 Blast hits to 225 proteins in 46 species: Archae - 0; Bacteria - 3; Metazoa - 94; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 406.0) & (original description: Putative TinI, Description = TMV-induced protein I, PFAM = PF01477)' T '35.1' 'not assigned.no ontology' 'niben101scf01825_457049-459912' '(gnl|cdd|28751 : 208.0) no description available & (at4g39730 : 201.0) Lipase/lipooxygenase, PLAT/LH2 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976); BEST Arabidopsis thaliana protein match is: Lipase/lipooxygenase, PLAT/LH2 family protein (TAIR:AT2G22170.1); Has 247 Blast hits to 225 proteins in 46 species: Archae - 0; Bacteria - 3; Metazoa - 94; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative JR14, Description = Putative root storage protein, PFAM = PF01477)' T '35.1' 'not assigned.no ontology' 'niben101scf01826_272291-290009' '(at5g50310 : 800.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G07720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36444 : 531.0) no description available & (reliability: 1600.0) & (original description: Putative KLHDC4, Description = Putative Kelch domain-containing protein, PFAM = PF13415;PF13415;PF13415;PF13854;PF13418;PF13422)' T '35.1' 'not assigned.no ontology' 'niben101scf01826_832857-838828' '(at3g48420 : 444.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT4G39970.1); Has 12560 Blast hits to 12559 proteins in 2179 species: Archae - 78; Bacteria - 10284; Metazoa - 135; Fungi - 145; Plants - 385; Viruses - 3; Other Eukaryotes - 1530 (source: NCBI BLink). & (gnl|cdd|38125 : 151.0) no description available & (gnl|cdd|30982 : 125.0) no description available & (reliability: 888.0) & (original description: Putative cbbY, Description = Haloacid dehalogenase, PFAM = PF13419)' T '35.1' 'not assigned.no ontology' 'niben101scf01827_194229-221323' '(at2g45700 : 634.0) sterile alpha motif (SAM) domain-containing protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sterile alpha motif-type (InterPro:IPR013761), Sterile alpha motif (InterPro:IPR001660), Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 1 (InterPro:IPR021129), DNA repair metallo-beta-lactamase (InterPro:IPR011084), Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: DNA repair metallo-beta-lactamase family protein (TAIR:AT3G26680.3); Has 2157 Blast hits to 2099 proteins in 358 species: Archae - 119; Bacteria - 227; Metazoa - 850; Fungi - 290; Plants - 353; Viruses - 0; Other Eukaryotes - 318 (source: NCBI BLink). & (gnl|cdd|36575 : 340.0) no description available & (gnl|cdd|87294 : 112.0) no description available & (reliability: 1268.0) & (original description: Putative v1g99015, Description = Predicted protein, PFAM = PF07522;PF00536)' T '35.1' 'not assigned.no ontology' 'niben101scf01831_93687-96343' '(at5g57370 : 80.9) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1777 (InterPro:IPR013957); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative SNR27, Description = U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, PFAM = PF08648)' T '35.1' 'not assigned.no ontology' 'niben101scf01832_3430-12702' '(at4g31520 : 457.0) SDA1 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Domain of unknown function, nucleolar NUC130/133, N-terminal (InterPro:IPR012977), Armadillo-type fold (InterPro:IPR016024), SDA1 (InterPro:IPR007949); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G13160.1); Has 8756 Blast hits to 5682 proteins in 453 species: Archae - 14; Bacteria - 613; Metazoa - 3270; Fungi - 1126; Plants - 516; Viruses - 196; Other Eukaryotes - 3021 (source: NCBI BLink). & (gnl|cdd|37440 : 453.0) no description available & (gnl|cdd|86842 : 186.0) no description available & (reliability: 894.0) & (original description: Putative BnaC08g40520D, Description = BnaC08g40520D protein, PFAM = PF08158;PF05285)' T '35.1' 'not assigned.no ontology' 'niben101scf01832_49198-54710' '(at4g10650 : 112.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G41670.1); Has 3555 Blast hits to 3555 proteins in 1390 species: Archae - 105; Bacteria - 2228; Metazoa - 282; Fungi - 444; Plants - 117; Viruses - 0; Other Eukaryotes - 379 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative DGP2, Description = Ribosome biogenesis GTPase A, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf01832_79674-87842' '(at4g10650 : 408.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G41670.1); Has 3555 Blast hits to 3555 proteins in 1390 species: Archae - 105; Bacteria - 2228; Metazoa - 282; Fungi - 444; Plants - 117; Viruses - 0; Other Eukaryotes - 379 (source: NCBI BLink). & (gnl|cdd|37696 : 193.0) no description available & (gnl|cdd|57927 : 173.0) no description available & (reliability: 816.0) & (original description: Putative DGP2, Description = DAR GTPase 2, mitochondrial, PFAM = PF01926)' T '35.1' 'not assigned.no ontology' 'niben101scf01834_181628-187439' '(at3g44190 : 417.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT5G22140.1); Has 14374 Blast hits to 14371 proteins in 2395 species: Archae - 444; Bacteria - 11667; Metazoa - 157; Fungi - 716; Plants - 246; Viruses - 0; Other Eukaryotes - 1144 (source: NCBI BLink). & (gnl|cdd|37706 : 204.0) no description available & (gnl|cdd|31444 : 143.0) no description available & (reliability: 834.0) & (original description: Putative Sb04g003640, Description = Putative uncharacterized protein Sb04g003640, PFAM = PF07992)' T '35.1' 'not assigned.no ontology' 'niben101scf01842_610395-615165' '(at2g36290 : 459.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G74300.1); Has 970 Blast hits to 968 proteins in 224 species: Archae - 20; Bacteria - 476; Metazoa - 0; Fungi - 77; Plants - 313; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (reliability: 918.0) & (original description: Putative umc2763, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf01842_620612-649794' '(at2g36290 : 467.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G74300.1); Has 970 Blast hits to 968 proteins in 224 species: Archae - 20; Bacteria - 476; Metazoa - 0; Fungi - 77; Plants - 313; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (reliability: 934.0) & (original description: Putative At2g36290, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf01842_649694-657109' '(at3g48410 : 486.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G36290.1); Has 1039 Blast hits to 1035 proteins in 267 species: Archae - 10; Bacteria - 561; Metazoa - 10; Fungi - 51; Plants - 319; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 972.0) & (original description: Putative BnaC03g53130D, Description = BnaC03g53130D protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf01859_871353-874859' '(at2g26490 : 574.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G34380.1); Has 38085 Blast hits to 18995 proteins in 635 species: Archae - 34; Bacteria - 5266; Metazoa - 14476; Fungi - 8827; Plants - 4594; Viruses - 0; Other Eukaryotes - 4888 (source: NCBI BLink). & (gnl|cdd|29257 : 142.0) no description available & (gnl|cdd|35495 : 106.0) no description available & (reliability: 1148.0) & (original description: Putative wdrp, Description = Myosin heavy chain kinase B, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf01876_182695-214056' '(at1g03110 : 447.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, alpha subunit (TAIR:AT2G21390.1); Has 13545 Blast hits to 7977 proteins in 481 species: Archae - 46; Bacteria - 4157; Metazoa - 4042; Fungi - 2887; Plants - 1145; Viruses - 0; Other Eukaryotes - 1268 (source: NCBI BLink). & (gnl|cdd|39117 : 133.0) no description available & (gnl|cdd|29257 : 85.4) no description available & (reliability: 894.0) & (original description: Putative PGSC0003DMG400005331, Description = tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit, PFAM = PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf01890_118863-121912' '(at5g60335 : 176.0) Thioesterase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: MaoC-like dehydratase (InterPro:IPR002539). & (gnl|cdd|48044 : 129.0) no description available & (gnl|cdd|36420 : 113.0) no description available & (reliability: 352.0) & (original description: Putative glysoja_004097, Description = Adenylate kinase isoenzyme 6 homolog, PFAM = PF01575)' T '35.1' 'not assigned.no ontology' 'niben101scf01894_316567-320393' '(at5g64550 : 301.0) loricrin-related; BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G09670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 602.0) & (original description: Putative WRKY19, Description = BnaC09g06380D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf01897_288554-307370' '(at3g08840 : 1118.0) D-alanine--D-alanine ligase family; FUNCTIONS IN: D-alanine-D-alanine ligase activity, catalytic activity, ATP binding; INVOLVED IN: peptidoglycan biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-alanine--D-alanine ligase/VANA/B/C, conserved site (InterPro:IPR000291), D-alanine--D-alanine ligase, C-terminal (InterPro:IPR011095), PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), D-alanine--D-alanine ligase, N-terminal (InterPro:IPR011127); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80932 : 153.0) no description available & (reliability: 2236.0) & (original description: Putative Ddl, Description = D-alanine-D-alanine ligase, PFAM = PF01820;PF01820;PF07478;PF07478)' T '35.1' 'not assigned.no ontology' 'niben101scf01897_532523-536685' '(at3g51660 : 146.0) Tautomerase/MIF superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: inflammatory response, response to other organism; LOCATED IN: peroxisome; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tautomerase (InterPro:IPR014347), Macrophage migration inhibitory factor (InterPro:IPR001398); BEST Arabidopsis thaliana protein match is: Tautomerase/MIF superfamily protein (TAIR:AT5G01650.1); Has 396 Blast hits to 396 proteins in 86 species: Archae - 0; Bacteria - 25; Metazoa - 165; Fungi - 0; Plants - 140; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|36970 : 109.0) no description available & (reliability: 292.0) & (original description: Putative At5g01650, Description = Macrophage migration inhibitory factor family protein, PFAM = PF01187)' T '35.1' 'not assigned.no ontology' 'niben101scf01911_842956-846064' '(at5g60335 : 171.0) Thioesterase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: MaoC-like dehydratase (InterPro:IPR002539). & (gnl|cdd|48044 : 129.0) no description available & (gnl|cdd|36420 : 109.0) no description available & (reliability: 342.0) & (original description: Putative glysoja_004097, Description = (R)-specific enoyl-CoA hydratase, PFAM = PF01575)' T '35.1' 'not assigned.no ontology' 'niben101scf01917_21216-29141' '(at1g10820 : 167.0) Protein of unknown function (DUF3755); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3755 (InterPro:IPR022228); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3755) (TAIR:AT1G60670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative BnaA08g25560D, Description = BnaA08g25560D protein, PFAM = PF12579)' T '35.1' 'not assigned.no ontology' 'niben101scf01918_545585-553360' '(at2g05590 : 248.0) TLD-domain containing nucleolar protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TLDc (InterPro:IPR006571); BEST Arabidopsis thaliana protein match is: TLD-domain containing nucleolar protein (TAIR:AT4G39870.2); Has 907 Blast hits to 899 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 481; Fungi - 117; Plants - 118; Viruses - 0; Other Eukaryotes - 191 (source: NCBI BLink). & (gnl|cdd|37583 : 155.0) no description available & (gnl|cdd|87300 : 123.0) no description available & (reliability: 496.0) & (original description: Putative OXR1, Description = TLDc, PFAM = PF07534)' T '35.1' 'not assigned.no ontology' 'niben101scf01920_57405-60136' '(at2g36300 : 230.0) Integral membrane Yip1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Yip1 domain (InterPro:IPR006977); BEST Arabidopsis thaliana protein match is: Integral membrane Yip1 family protein (TAIR:AT3G52760.1); Has 658 Blast hits to 658 proteins in 200 species: Archae - 0; Bacteria - 0; Metazoa - 333; Fungi - 123; Plants - 111; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|38313 : 190.0) no description available & (gnl|cdd|34684 : 108.0) no description available & (reliability: 460.0) & (original description: Putative PGSC0003DMG400019486, Description = Protein YIPF, PFAM = PF04893)' T '35.1' 'not assigned.no ontology' 'niben101scf01922_839615-843146' '(at3g23980 : 155.0) Encodes a protein that interacts with the Polycomb-group (Pc-G) histone methyltransferase CLF (CURLY LEAF). It colocalizes with CLF to the nucleus and represses a subset of Pc-G target genes. The pleiotropic developmental mutant phenotype suggests that BLI prevents premature differentiation.; BLISTER (BLI); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: flower development, seed development, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 32015 Blast hits to 19612 proteins in 1632 species: Archae - 290; Bacteria - 4748; Metazoa - 14972; Fungi - 3061; Plants - 1469; Viruses - 92; Other Eukaryotes - 7383 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative BLI, Description = BLISTER-like protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf01931_623769-629978' '(at3g45770 : 469.0) Polyketide synthase, enoylreductase family protein; FUNCTIONS IN: copper ion binding, zinc ion binding, ATP binding; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: ARP protein (REF) (TAIR:AT1G49670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35248 : 409.0) no description available & (gnl|cdd|30949 : 174.0) no description available & (reliability: 938.0) & (original description: Putative mecr, Description = Trans-2-enoyl-CoA reductase, mitochondrial, PFAM = PF08240;PF00107)' T '35.1' 'not assigned.no ontology' 'niben101scf01934_274230-277707' '(at3g17380 : 326.0) TRAF-like family protein; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT3G20370.1); Has 1739 Blast hits to 1291 proteins in 145 species: Archae - 0; Bacteria - 0; Metazoa - 259; Fungi - 101; Plants - 1336; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (gnl|cdd|58100 : 85.1) no description available & (gnl|cdd|37198 : 83.0) no description available & (reliability: 652.0) & (original description: Putative glysoja_004270, Description = Ubiquitin carboxyl-terminal hydrolase 12, PFAM = PF00917;PF00917)' T '35.1' 'not assigned.no ontology' 'niben101scf01941_15223-19434' '(at5g53750 : 283.0) CBS domain-containing protein; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT4G27460.1); Has 152 Blast hits to 152 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 150; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 556.0) & (original description: Putative CBSX5, Description = CBS domain-containing protein CBSX5, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf01943_412531-424652' '(at2g05755 : 386.0) Nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); Has 4644 Blast hits to 4643 proteins in 977 species: Archae - 33; Bacteria - 1970; Metazoa - 235; Fungi - 138; Plants - 28; Viruses - 0; Other Eukaryotes - 2240 (source: NCBI BLink). & (gnl|cdd|39710 : 97.3) no description available & (reliability: 772.0) & (original description: Putative At2g05755, Description = At2g05755, PFAM = PF00892)' T '35.1' 'not assigned.no ontology' 'niben101scf01947_40760-44072' '(at5g19820 : 194.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37382 : 172.0) no description available & (reliability: 388.0) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'niben101scf01947_44073-47773' '(at5g19820 : 182.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37382 : 135.0) no description available & (reliability: 364.0) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'niben101scf01948_217077-221873' '(at1g24530 : 329.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, heterotrimeric G-protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G24130.1); Has 47444 Blast hits to 22226 proteins in 799 species: Archae - 42; Bacteria - 6792; Metazoa - 17370; Fungi - 11016; Plants - 5872; Viruses - 0; Other Eukaryotes - 6352 (source: NCBI BLink). & (gnl|cdd|29257 : 117.0) no description available & (gnl|cdd|35495 : 90.1) no description available & (reliability: 658.0) & (original description: Putative At1g24530, Description = F21J9.19, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf01956_1006574-1014960' '(gnl|cdd|69058 : 167.0) no description available & (at4g14420 : 162.0) HR-like lesion-inducing protein-related; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HR-like lesion-inducer (InterPro:IPR008637); BEST Arabidopsis thaliana protein match is: HR-like lesion-inducing protein-related (TAIR:AT1G04340.1); Has 163 Blast hits to 163 proteins in 27 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative Os04g0181100, Description = OSJNBa0027O01.6 protein, PFAM = PF05514)' T '35.1' 'not assigned.no ontology' 'niben101scf01958_191132-200675' '(at5g47540 : 530.0) Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT4G17270.1); Has 570 Blast hits to 568 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 142; Plants - 154; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|36779 : 432.0) no description available & (gnl|cdd|87570 : 359.0) no description available & (reliability: 1020.0) & (original description: Putative hymA, Description = Calcium-binding protein 39, PFAM = PF08569)' T '35.1' 'not assigned.no ontology' 'niben101scf01970_822965-836812' '(gnl|cdd|36491 : 829.0) no description available & (at1g10950 : 822.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis.; transmembrane nine 1 (TMN1); LOCATED IN: integral to membrane, Golgi apparatus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G37310.1); Has 1611 Blast hits to 1538 proteins in 326 species: Archae - 0; Bacteria - 16; Metazoa - 610; Fungi - 273; Plants - 454; Viruses - 0; Other Eukaryotes - 258 (source: NCBI BLink). & (gnl|cdd|66650 : 560.0) no description available & (reliability: 1644.0) & (original description: Putative PGSC0003DMG400009753, Description = Transmembrane 9 superfamily member, PFAM = PF02990)' T '35.1' 'not assigned.no ontology' 'niben101scf01970_823350-826255' '(at1g10950 : 265.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis.; transmembrane nine 1 (TMN1); LOCATED IN: integral to membrane, Golgi apparatus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G37310.1); Has 1611 Blast hits to 1538 proteins in 326 species: Archae - 0; Bacteria - 16; Metazoa - 610; Fungi - 273; Plants - 454; Viruses - 0; Other Eukaryotes - 258 (source: NCBI BLink). & (gnl|cdd|36491 : 215.0) no description available & (gnl|cdd|66650 : 185.0) no description available & (reliability: 530.0) & (original description: Putative SMBP, Description = Transmembrane 9 superfamily member, PFAM = PF02990)' T '35.1' 'not assigned.no ontology' 'niben101scf01983_1028526-1034421' '(at1g78620 : 334.0) Protein of unknown function DUF92, transmembrane; LOCATED IN: chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF92, transmembrane (InterPro:IPR002794); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|32021 : 165.0) no description available & (reliability: 668.0) & (original description: Putative sll0875, Description = Uncharacterized membrane protein sll0875, PFAM = PF01940)' T '35.1' 'not assigned.no ontology' 'niben101scf01991_272126-280177' '(at5g38360 : 304.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 14 (TAIR:AT1G33990.1); Has 2073 Blast hits to 2071 proteins in 500 species: Archae - 14; Bacteria - 1119; Metazoa - 146; Fungi - 52; Plants - 356; Viruses - 0; Other Eukaryotes - 386 (source: NCBI BLink). & (reliability: 608.0) & (original description: Putative CGLD7, Description = Esterase-like protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf01998_859057-868443' '(at5g11910 : 333.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G47590.1); Has 1404 Blast hits to 1403 proteins in 484 species: Archae - 24; Bacteria - 915; Metazoa - 0; Fungi - 22; Plants - 152; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (gnl|cdd|39866 : 332.0) no description available & (reliability: 666.0) & (original description: Putative At5g11910, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'niben101scf01999_355795-359144' '(gnl|cdd|66174 : 246.0) no description available & (at3g26040 : 228.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 2415 Blast hits to 2403 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 2353; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (o24645|hcbt1_diaca : 83.2) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 456.0) & (original description: Putative PGSC0003DMG400007171, Description = 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative, PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'niben101scf01999_356374-358972' '(gnl|cdd|66174 : 90.0) no description available & (at3g30280 : 84.3) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT4G15390.1); Has 2342 Blast hits to 2327 proteins in 132 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 49; Plants - 2289; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative , Description = , PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'niben101scf02001_339229-347639' '(at4g35890 : 148.0) winged-helix DNA-binding transcription factor family protein; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT5G66100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|47984 : 102.0) no description available & (reliability: 296.0) & (original description: Putative LARP1C, Description = La-related protein 1C, PFAM = PF05383)' T '35.1' 'not assigned.no ontology' 'niben101scf02002_469055-474300' '(at4g22360 : 305.0) SWIB complex BAF60b domain-containing protein; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121), SWIB domain (InterPro:IPR019835), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: SWIB complex BAF60b domain-containing protein (TAIR:AT3G19080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37157 : 124.0) no description available & (gnl|cdd|47490 : 112.0) no description available & (reliability: 610.0) & (original description: Putative TCM_030363, Description = SWIB complex BAF60b domain-containing protein, putative isoform 1, PFAM = PF08766;PF02201;PF02201)' T '35.1' 'not assigned.no ontology' 'niben101scf02007_692299-702719' '(at1g27430 : 363.0) GYF domain-containing protein; CONTAINS InterPro DOMAIN/s: GYF (InterPro:IPR003169); BEST Arabidopsis thaliana protein match is: GYF domain-containing protein (TAIR:AT1G24300.1); Has 16615 Blast hits to 9086 proteins in 533 species: Archae - 0; Bacteria - 846; Metazoa - 6412; Fungi - 1516; Plants - 946; Viruses - 78; Other Eukaryotes - 6817 (source: NCBI BLink). & (reliability: 726.0) & (original description: Putative At1g24300, Description = GYF domain-containing protein, PFAM = PF02213)' T '35.1' 'not assigned.no ontology' 'niben101scf02011_361843-370667' '(at4g23895 : 273.0) Pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: nucleoside diphosphate kinase activity, ATP binding; INVOLVED IN: UTP biosynthetic process, GTP biosynthetic process, CTP biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Nucleoside diphosphate kinase, core (InterPro:IPR001564), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Nucleoside diphosphate kinase family protein (TAIR:AT4G23900.1). & (reliability: 546.0) & (original description: Putative At4g23895, Description = Pleckstrin homology (PH) domain-containing protein, PFAM = PF00169)' T '35.1' 'not assigned.no ontology' 'niben101scf02041_415950-418834' '(at2g17570 : 328.0) Undecaprenyl pyrophosphate synthetase family protein; FUNCTIONS IN: transferase activity, transferring alkyl or aryl (other than methyl) groups; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Di-trans-poly-cis-decaprenylcistransferase-like, conserved site (InterPro:IPR018520), Di-trans-poly-cis-decaprenylcistransferase-like (InterPro:IPR001441); BEST Arabidopsis thaliana protein match is: Undecaprenyl pyrophosphate synthetase family protein (TAIR:AT5G60510.1); Has 9017 Blast hits to 8995 proteins in 2779 species: Archae - 230; Bacteria - 5298; Metazoa - 197; Fungi - 223; Plants - 211; Viruses - 0; Other Eukaryotes - 2858 (source: NCBI BLink). & (gnl|cdd|36815 : 285.0) no description available & (gnl|cdd|29593 : 223.0) no description available & (reliability: 656.0) & (original description: Putative CPT, Description = Alkyl transferase, PFAM = PF01255)' T '35.1' 'not assigned.no ontology' 'niben101scf02042_126595-131807' '(at4g15050 : 204.0) Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G10190.1); Has 633 Blast hits to 604 proteins in 22 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 6; Plants - 620; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66735 : 157.0) no description available & (reliability: 372.0) & (original description: Putative , Description = , PFAM = PF03080;PF14365)' T '35.1' 'not assigned.no ontology' 'niben101scf02043_13448-16132' '(at2g29640 : 254.0) JOSEPHIN-like protein (JOSL); CONTAINS InterPro DOMAIN/s: Machado-Joseph disease protein MJD (InterPro:IPR006155); BEST Arabidopsis thaliana protein match is: josephin protein-related (TAIR:AT1G07300.1); Has 526 Blast hits to 526 proteins in 96 species: Archae - 0; Bacteria - 0; Metazoa - 376; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|65850 : 180.0) no description available & (gnl|cdd|38145 : 108.0) no description available & (reliability: 508.0) & (original description: Putative Sb01g040140, Description = Putative uncharacterized protein Sb01g040140, PFAM = PF02099)' T '35.1' 'not assigned.no ontology' 'niben101scf02044_1250306-1267994' '(at2g18900 : 875.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT3G26480.1); Has 4620 Blast hits to 3140 proteins in 363 species: Archae - 18; Bacteria - 1955; Metazoa - 712; Fungi - 1091; Plants - 306; Viruses - 0; Other Eukaryotes - 538 (source: NCBI BLink). & (gnl|cdd|37174 : 516.0) no description available & (reliability: 1750.0) & (original description: Putative At2g18900, Description = Transducin/WD40 repeat-like superfamily protein, PFAM = PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf02060_3555-14016' '(at3g06880 : 942.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: binding, nucleotide binding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781). & (reliability: 1884.0) & (original description: Putative Sb09g018080, Description = Putative uncharacterized protein Sb09g018080, PFAM = PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf02060_100476-105811' '(at5g27760 : 104.0) Hypoxia-responsive family protein; CONTAINS InterPro DOMAIN/s: Hypoxia induced protein, conserved region (InterPro:IPR007667); BEST Arabidopsis thaliana protein match is: Hypoxia-responsive family protein (TAIR:AT3G05550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative HR2, Description = Hypoia-responsive family protein 2, PFAM = PF04588)' T '35.1' 'not assigned.no ontology' 'niben101scf02063_200992-205560' '(gnl|cdd|69058 : 184.0) no description available & (at4g14420 : 150.0) HR-like lesion-inducing protein-related; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HR-like lesion-inducer (InterPro:IPR008637); BEST Arabidopsis thaliana protein match is: HR-like lesion-inducing protein-related (TAIR:AT1G04340.1); Has 163 Blast hits to 163 proteins in 27 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative dl3250c, Description = HR-like lesion-inducer, PFAM = PF05514)' T '35.1' 'not assigned.no ontology' 'niben101scf02072_320751-332826' '(at5g19830 : 327.0) Peptidyl-tRNA hydrolase family protein; FUNCTIONS IN: aminoacyl-tRNA hydrolase activity; INVOLVED IN: translation; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-tRNA hydrolase, conserved site (InterPro:IPR018171), Peptidyl-tRNA hydrolase (InterPro:IPR001328); BEST Arabidopsis thaliana protein match is: Peptidyl-tRNA hydrolase family protein (TAIR:AT5G16140.2); Has 7915 Blast hits to 7912 proteins in 2585 species: Archae - 0; Bacteria - 5291; Metazoa - 47; Fungi - 78; Plants - 126; Viruses - 0; Other Eukaryotes - 2373 (source: NCBI BLink). & (gnl|cdd|48347 : 302.0) no description available & (gnl|cdd|37466 : 201.0) no description available & (reliability: 654.0) & (original description: Putative pth, Description = Peptidyl-tRNA hydrolase, PFAM = PF01195)' T '35.1' 'not assigned.no ontology' 'niben101scf02072_394552-406814' '(at5g19820 : 1661.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37382 : 1089.0) no description available & (reliability: 3322.0) & (original description: Putative emb2734, Description = Protein EMBRYO DEFECTIVE 2734, PFAM = PF13646;PF02985;PF04510)' T '35.1' 'not assigned.no ontology' 'niben101scf02073_547641-572143' '(at4g10030 : 465.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G52570.1); Has 3883 Blast hits to 3883 proteins in 1174 species: Archae - 26; Bacteria - 2816; Metazoa - 266; Fungi - 159; Plants - 102; Viruses - 3; Other Eukaryotes - 511 (source: NCBI BLink). & (gnl|cdd|37593 : 207.0) no description available & (reliability: 930.0) & (original description: Putative At4g10030, Description = Putative alpha/beta hydrolase domain-containing protein 11-like, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf02077_143053-155465' '(at1g56290 : 300.0) CwfJ-like family protein; CONTAINS InterPro DOMAIN/s: Cwf19-like, C-terminal domain-1 (InterPro:IPR006768), Cwf19-like protein, C-terminal domain-2 (InterPro:IPR006767); BEST Arabidopsis thaliana protein match is: CwfJ-like family protein / zinc finger (CCCH-type) family protein (TAIR:AT5G56900.2); Has 2474 Blast hits to 2009 proteins in 284 species: Archae - 2; Bacteria - 39; Metazoa - 1047; Fungi - 300; Plants - 173; Viruses - 2; Other Eukaryotes - 911 (source: NCBI BLink). & (gnl|cdd|37688 : 255.0) no description available & (gnl|cdd|86708 : 107.0) no description available & (reliability: 600.0) & (original description: Putative C19L2, Description = CWF19-like protein 2, PFAM = PF04676;PF04677)' T '35.1' 'not assigned.no ontology' 'niben101scf02077_1021272-1024623' '(at3g48195 : 127.0) Phox (PX) domain-containing protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: intracellular signaling pathway, cell communication; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Phox-like (InterPro:IPR001683); Has 654 Blast hits to 601 proteins in 103 species: Archae - 0; Bacteria - 16; Metazoa - 551; Fungi - 11; Plants - 27; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative At3g48195, Description = Os01g0549500 protein, PFAM = PF13901)' T '35.1' 'not assigned.no ontology' 'niben101scf02081_351975-354885' '(at1g14870 : 155.0) PLANT CADMIUM RESISTANCE 2 (PCR2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT5G35525.1); Has 803 Blast hits to 802 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 123; Fungi - 115; Plants - 527; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|86720 : 106.0) no description available & (reliability: 310.0) & (original description: Putative PCR2, Description = Protein PLANT CADMIUM RESISTANCE 2, PFAM = PF04749)' T '35.1' 'not assigned.no ontology' 'niben101scf02085_2636318-2643099' '(at3g51730 : 169.0) saposin B domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Saposin B (InterPro:IPR008139), Saposin-like (InterPro:IPR011001), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138); BEST Arabidopsis thaliana protein match is: saposin B domain-containing protein (TAIR:AT5G01800.1); Has 951 Blast hits to 460 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 738; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|36554 : 102.0) no description available & (reliability: 338.0) & (original description: Putative BnaA09g32270D, Description = BnaA09g32260D protein, PFAM = PF05184;PF05184;PF03489)' T '35.1' 'not assigned.no ontology' 'niben101scf02086_148051-162598' '(at5g17250 : 976.0) Alkaline-phosphatase-like family protein; FUNCTIONS IN: transferase activity, catalytic activity; INVOLVED IN: GPI anchor biosynthetic process, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase (InterPro:IPR002591), Alkaline-phosphatase-like, core domain (InterPro:IPR017850); BEST Arabidopsis thaliana protein match is: Alkaline-phosphatase-like family protein (TAIR:AT2G22530.1); Has 1431 Blast hits to 1201 proteins in 306 species: Archae - 0; Bacteria - 228; Metazoa - 476; Fungi - 488; Plants - 85; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink). & (gnl|cdd|37337 : 549.0) no description available & (gnl|cdd|31713 : 83.3) no description available & (reliability: 1952.0) & (original description: Putative At5g17250, Description = Alkaline-phosphatase-like protein, PFAM = PF01663)' T '35.1' 'not assigned.no ontology' 'niben101scf02090_463751-479635' '(at4g09670 : 460.0) Oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase, N-terminal (InterPro:IPR000683), Oxidoreductase, C-terminal (InterPro:IPR004104), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: Glyceraldehyde-3-phosphate dehydrogenase-like family protein (TAIR:AT1G34200.1); Has 17148 Blast hits to 17147 proteins in 2160 species: Archae - 344; Bacteria - 12203; Metazoa - 250; Fungi - 605; Plants - 99; Viruses - 0; Other Eukaryotes - 3647 (source: NCBI BLink). & (gnl|cdd|37952 : 338.0) no description available & (gnl|cdd|31017 : 144.0) no description available & (reliability: 920.0) & (original description: Putative At4g09670, Description = Uncharacterized oxidoreductase At4g09670, PFAM = PF01408)' T '35.1' 'not assigned.no ontology' 'niben101scf02090_796835-802061' '(gnl|cdd|35624 : 733.0) no description available & (at1g22730 : 659.0) MA3 domain-containing protein; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MA3 domain-containing protein (TAIR:AT5G63190.2); Has 2025 Blast hits to 776 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 1297; Fungi - 8; Plants - 551; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (gnl|cdd|86147 : 111.0) no description available & (reliability: 1318.0) & (original description: Putative T22J18.10, Description = MA3 domain-containing protein, PFAM = PF02847;PF02847;PF02847;PF02847)' T '35.1' 'not assigned.no ontology' 'niben101scf02093_614270-620887' '(at4g12830 : 503.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G52510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39380 : 97.7) no description available & (gnl|cdd|81168 : 86.1) no description available & (reliability: 1006.0) & (original description: Putative At4g12830, Description = AT4g12830/T20K18_180, PFAM = PF00561)' T '35.1' 'not assigned.no ontology' 'niben101scf02098_101849-110250' '(at5g06370 : 348.0) NC domain-containing protein-related; CONTAINS InterPro DOMAIN/s: NC (InterPro:IPR007053); BEST Arabidopsis thaliana protein match is: NC domain-containing protein-related (TAIR:AT3G02700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 696.0) & (original description: Putative At5g06370, Description = AT5g06370/MHF15_11, PFAM = PF04970)' T '35.1' 'not assigned.no ontology' 'niben101scf02098_226699-232273' '(at3g07570 : 388.0) Cytochrome b561/ferric reductase transmembrane with DOMON related domain; FUNCTIONS IN: dopamine beta-monooxygenase activity; INVOLVED IN: histidine catabolic process; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593), DOMON (InterPro:IPR013050); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane with DOMON related domain (TAIR:AT3G61750.1); Has 561 Blast hits to 559 proteins in 100 species: Archae - 0; Bacteria - 4; Metazoa - 121; Fungi - 31; Plants - 384; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|39494 : 188.0) no description available & (gnl|cdd|47940 : 99.1) no description available & (reliability: 776.0) & (original description: Putative BnaC01g39800D, Description = BnaC01g39800D protein, PFAM = PF03188;PF03351)' T '35.1' 'not assigned.no ontology' 'niben101scf02100_7020-11883' '(at4g36610 : 385.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G18360.1); Has 7159 Blast hits to 7154 proteins in 1280 species: Archae - 79; Bacteria - 4806; Metazoa - 419; Fungi - 48; Plants - 467; Viruses - 0; Other Eukaryotes - 1340 (source: NCBI BLink). & (gnl|cdd|36667 : 178.0) no description available & (gnl|cdd|30941 : 109.0) no description available & (reliability: 770.0) & (original description: Putative At2g18360, Description = At2g18360/T30D6.13, PFAM = PF00561)' T '35.1' 'not assigned.no ontology' 'niben101scf02105_172956-183484' '(at4g15050 : 187.0) Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G10190.1); Has 633 Blast hits to 604 proteins in 22 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 6; Plants - 620; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66735 : 145.0) no description available & (reliability: 374.0) & (original description: Putative , Description = , PFAM = PF03080;PF14365)' T '35.1' 'not assigned.no ontology' 'niben101scf02105_227182-231522' '(at4g15050 : 251.0) Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G10190.1); Has 633 Blast hits to 604 proteins in 22 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 6; Plants - 620; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66735 : 178.0) no description available & (reliability: 468.0) & (original description: Putative ARALYDRAFT_658734, Description = Predicted protein, PFAM = PF14365;PF03080)' T '35.1' 'not assigned.no ontology' 'niben101scf02108_295178-298908' '(at1g57540 : 166.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 29 Blast hits to 29 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative T8L23.1, Description = At1g57540, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf02110_11404-14840' '(at4g19460 : 622.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G73160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30787 : 122.0) no description available & (gnl|cdd|36327 : 86.5) no description available & (reliability: 1244.0) & (original description: Putative UGT31, Description = UDP-glycosyltransferase, PFAM = PF13439;PF00534)' T '35.1' 'not assigned.no ontology' 'niben101scf02112_79283-84694' '(at4g02530 : 162.0) chloroplast thylakoid lumen protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 54 Blast hits to 54 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative At4g02530, Description = Thylakoid lumenal 16.5 kDa protein, chloroplastic, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf02122_164114-171286' '(at1g60990 : 543.0) Glycine cleavage T-protein family; FUNCTIONS IN: aminomethyltransferase activity; INVOLVED IN: glycine catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Folate-binding, YgfZ (InterPro:IPR017703), Glycine cleavage T-protein, N-terminal (InterPro:IPR006222), Glycine cleavage T-protein, C-terminal barrel (InterPro:IPR013977); BEST Arabidopsis thaliana protein match is: Glycine cleavage T-protein family (TAIR:AT1G11860.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37981 : 328.0) no description available & (gnl|cdd|30703 : 157.0) no description available & (reliability: 1086.0) & (original description: Putative gcvT, Description = Folate-binding protein YgfZ, PFAM = PF08669;PF01571)' T '35.1' 'not assigned.no ontology' 'niben101scf02123_306791-323208' '(at5g13020 : 402.0) Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), ENT (InterPro:IPR005491); BEST Arabidopsis thaliana protein match is: Emsy N Terminus (ENT) domain-containing protein (TAIR:AT2G44440.1); Has 417 Blast hits to 397 proteins in 49 species: Archae - 0; Bacteria - 2; Metazoa - 101; Fungi - 4; Plants - 307; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|39874 : 195.0) no description available & (gnl|cdd|67356 : 116.0) no description available & (reliability: 804.0) & (original description: Putative EML3, Description = Protein EMSY-LIKE 3, PFAM = PF03735)' T '35.1' 'not assigned.no ontology' 'niben101scf02124_132271-138710' '(at1g16040 : 201.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GPI biosynthesis protein Pig-F (InterPro:IPR009580); Has 280 Blast hits to 280 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 111; Plants - 44; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|70180 : 155.0) no description available & (reliability: 402.0) & (original description: Putative PIGF, Description = Phosphatidylinositol glycan synthesis class F protein, PFAM = PF06699)' T '35.1' 'not assigned.no ontology' 'niben101scf02131_95488-105348' '(at2g28370 : 206.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G37200.1); Has 210 Blast hits to 210 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 210; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative gba_locus_10451, Description = CASP-like protein 5A1, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf02133_423281-431269' '(at5g64170 : 93.6) dentin sialophosphoprotein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54500.2); Has 181 Blast hits to 169 proteins in 40 species: Archae - 2; Bacteria - 18; Metazoa - 17; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'niben101scf02137_10528-13832' '(at5g67540 : 551.0) Arabinanase/levansucrase/invertase; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 43 (InterPro:IPR006710); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family protein 43 (TAIR:AT3G49880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1102.0) & (original description: Putative BF3773, Description = Beta-glucanase, PFAM = PF04616)' T '35.1' 'not assigned.no ontology' 'niben101scf02137_11320-16196' '(at5g67540 : 243.0) Arabinanase/levansucrase/invertase; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 43 (InterPro:IPR006710); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family protein 43 (TAIR:AT3G49880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative xsa43J, Description = Beta-glucanase, PFAM = PF04616)' T '35.1' 'not assigned.no ontology' 'niben101scf02139_445264-461830' '(at5g03370 : 145.0) acylphosphatase family; FUNCTIONS IN: acylphosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acylphosphatase-like (InterPro:IPR001792), Acylphosphatase, conserved site (InterPro:IPR017968), Acylphosphatase (InterPro:IPR020456); Has 2946 Blast hits to 2946 proteins in 1156 species: Archae - 171; Bacteria - 2226; Metazoa - 216; Fungi - 33; Plants - 44; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink). & (gnl|cdd|38570 : 103.0) no description available & (gnl|cdd|31446 : 94.1) no description available & (reliability: 290.0) & (original description: Putative acyP, Description = Acylphosphatase, PFAM = PF00708)' T '35.1' 'not assigned.no ontology' 'niben101scf02139_466415-468801' '(at5g03370 : 114.0) acylphosphatase family; FUNCTIONS IN: acylphosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acylphosphatase-like (InterPro:IPR001792), Acylphosphatase, conserved site (InterPro:IPR017968), Acylphosphatase (InterPro:IPR020456); Has 2946 Blast hits to 2946 proteins in 1156 species: Archae - 171; Bacteria - 2226; Metazoa - 216; Fungi - 33; Plants - 44; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink). & (gnl|cdd|31446 : 81.4) no description available & (gnl|cdd|38570 : 81.1) no description available & (reliability: 228.0) & (original description: Putative acyP, Description = Acylphosphatase, PFAM = PF00708)' T '35.1' 'not assigned.no ontology' 'niben101scf02144_52272-56067' '(at4g28280 : 132.0) LORELEI-LIKE-GPI ANCHORED PROTEIN 3 (LLG3); BEST Arabidopsis thaliana protein match is: LORELEI-LIKE-GPI ANCHORED PROTEIN 2 (TAIR:AT2G20700.1). & (reliability: 256.0) & (original description: Putative LLG3, Description = LORELEI-like-GPI anchored protein 3, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf02145_756671-765057' '(at1g11930 : 378.0) Predicted pyridoxal phosphate-dependent enzyme, YBL036C type; CONTAINS InterPro DOMAIN/s: Predicted pyridoxal phosphate-dependent enzyme, YBL036C type (InterPro:IPR011078), Alanine racemase, N-terminal (InterPro:IPR001608); BEST Arabidopsis thaliana protein match is: Predicted pyridoxal phosphate-dependent enzyme, YBL036C type (TAIR:AT4G26860.1); Has 7155 Blast hits to 7155 proteins in 2359 species: Archae - 21; Bacteria - 4226; Metazoa - 130; Fungi - 135; Plants - 56; Viruses - 0; Other Eukaryotes - 2587 (source: NCBI BLink). & (gnl|cdd|38367 : 341.0) no description available & (gnl|cdd|29733 : 275.0) no description available & (reliability: 756.0) & (original description: Putative PROSC, Description = Proline synthase co-transcribed bacterial homolog protein, PFAM = PF01168)' T '35.1' 'not assigned.no ontology' 'niben101scf02145_787468-789971' '(at1g11925 : 109.0) Encodes a Stigma-specific Stig1 family protein; Stigma-specific Stig1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Stigma-specific protein Stig1 (InterPro:IPR006969); BEST Arabidopsis thaliana protein match is: Stigma-specific Stig1 family protein (TAIR:AT1G50720.1); Has 350 Blast hits to 216 proteins in 35 species: Archae - 0; Bacteria - 116; Metazoa - 3; Fungi - 54; Plants - 172; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|68459 : 102.0) no description available & (reliability: 218.0) & (original description: Putative TCM_030276, Description = Stigma-specific Stig1 family protein, putative, PFAM = PF04885)' T '35.1' 'not assigned.no ontology' 'niben101scf02145_979205-983501' '(at5g42570 : 221.0) B-cell receptor-associated 31-like; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: B-cell receptor-associated protein 31-like (TAIR:AT1G11905.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37173 : 131.0) no description available & (reliability: 442.0) & (original description: Putative BnaC08g41750D, Description = BnaC08g41750D protein, PFAM = PF05529)' T '35.1' 'not assigned.no ontology' 'niben101scf02145_1174840-1179800' '(at1g11820 : 736.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT2G01630.1). & (gnl|cdd|84700 : 245.0) no description available & (p52409|e13b_wheat : 231.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1472.0) & (original description: Putative At1g11820, Description = Glucan endo-1,3-beta-glucosidase 1, PFAM = PF00332;PF07983)' T '35.1' 'not assigned.no ontology' 'niben101scf02153_356750-360521' '(at3g03990 : 444.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G37470.1); Has 7052 Blast hits to 7050 proteins in 1427 species: Archae - 69; Bacteria - 5615; Metazoa - 94; Fungi - 57; Plants - 279; Viruses - 0; Other Eukaryotes - 938 (source: NCBI BLink). & (gnl|cdd|30941 : 86.7) no description available & (reliability: 888.0) & (original description: Putative DAD2, Description = Probable strigolactone esterase DAD2, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf02159_5182-8387' '(at1g24530 : 321.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, heterotrimeric G-protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G24130.1); Has 47444 Blast hits to 22226 proteins in 799 species: Archae - 42; Bacteria - 6792; Metazoa - 17370; Fungi - 11016; Plants - 5872; Viruses - 0; Other Eukaryotes - 6352 (source: NCBI BLink). & (gnl|cdd|29257 : 112.0) no description available & (gnl|cdd|35495 : 94.7) no description available & (reliability: 642.0) & (original description: Putative TCM_014521, Description = Transducin/WD40 repeat-like superfamily protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf02159_89130-96356' '(at5g50230 : 736.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Autophagy-related protein 16 (InterPro:IPR013923), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 76401 Blast hits to 35303 proteins in 1111 species: Archae - 133; Bacteria - 9405; Metazoa - 31134; Fungi - 15838; Plants - 8951; Viruses - 22; Other Eukaryotes - 10918 (source: NCBI BLink). & (gnl|cdd|35509 : 411.0) no description available & (gnl|cdd|29257 : 204.0) no description available & (o24076|gblp_medsa : 93.2) Guanine nucleotide-binding protein subunit beta-like protein - Medicago sativa (Alfalfa) & (reliability: 1472.0) & (original description: Putative ATG16, Description = Autophagy-related protein 16, PFAM = PF08614;PF00400;PF00400;PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf02182_1892741-1921554' '(at4g10050 : 482.0) esterase/lipase/thioesterase family protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073), Protein phosphatase methylesterase, eukaryotic (InterPro:IPR016812); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37775 : 377.0) no description available & (reliability: 964.0) & (original description: Putative ppe1, Description = PME-1, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf02182_1902267-1919744' '(at4g10050 : 333.0) esterase/lipase/thioesterase family protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073), Protein phosphatase methylesterase, eukaryotic (InterPro:IPR016812); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37775 : 284.0) no description available & (reliability: 666.0) & (original description: Putative ppe1, Description = PME-1, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf02195_572828-585268' '(at3g50440 : 290.0) Encodes a protein shown to have methyl jasmonate esterase activity in vitro. This protein does not act on methyl IAA, MeSA, MeGA4, or MEGA9 in vitro.; methyl esterase 10 (MES10); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 1 (TAIR:AT2G23620.1); Has 1602 Blast hits to 1600 proteins in 360 species: Archae - 4; Bacteria - 838; Metazoa - 1; Fungi - 25; Plants - 612; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (q40708|pir7a_orysa : 201.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 580.0) & (original description: Putative MES10, Description = Methylesterase 10, PFAM = PF00561)' T '35.1' 'not assigned.no ontology' 'niben101scf02199_192676-200650' '(at5g12220 : 220.0) las1-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Las1-like (InterPro:IPR007174). & (gnl|cdd|37636 : 164.0) no description available & (gnl|cdd|67640 : 152.0) no description available & (reliability: 440.0) & (original description: Putative At5g12220, Description = Las1-like family protein, PFAM = PF04031)' T '35.1' 'not assigned.no ontology' 'niben101scf02199_199110-202920' '(at5g12220 : 99.8) las1-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Las1-like (InterPro:IPR007174). & (reliability: 199.6) & (original description: Putative , Description = Putative pre-rRNA-processing protein las1-like, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf02203_496498-506223' '(at2g34260 : 420.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29257 : 110.0) no description available & (gnl|cdd|35487 : 99.9) no description available & (reliability: 840.0) & (original description: Putative WDR55, Description = WD repeat-containing protein 55, PFAM = PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf02215_120941-126921' '(at1g67170 : 213.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 5478 Blast hits to 4354 proteins in 533 species: Archae - 87; Bacteria - 653; Metazoa - 2554; Fungi - 380; Plants - 418; Viruses - 16; Other Eukaryotes - 1370 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative FLXL2, Description = Protein FLX-like 2, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf02216_28416-42937' '(at5g08430 : 305.0) SWIB/MDM2 domain;Plus-3;GYF; FUNCTIONS IN: DNA binding; INVOLVED IN: histone modification, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Plus-3 domain, subgroup (InterPro:IPR018144), SWIB/MDM2 domain (InterPro:IPR003121), Plus-3 (InterPro:IPR004343), GYF (InterPro:IPR003169); BEST Arabidopsis thaliana protein match is: SWIB/MDM2 domain;Plus-3;GYF (TAIR:AT5G23480.1); Has 361 Blast hits to 341 proteins in 67 species: Archae - 0; Bacteria - 4; Metazoa - 120; Fungi - 28; Plants - 189; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|66779 : 82.6) no description available & (reliability: 610.0) & (original description: Putative cip, Description = Uncharacterized protein At5g08430, PFAM = PF02201;PF02213;PF03126)' T '35.1' 'not assigned.no ontology' 'niben101scf02219_373723-440121' '(at1g78070 : 641.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G36070.1); Has 25796 Blast hits to 12397 proteins in 585 species: Archae - 64; Bacteria - 7254; Metazoa - 7661; Fungi - 5235; Plants - 2447; Viruses - 0; Other Eukaryotes - 3135 (source: NCBI BLink). & (gnl|cdd|29257 : 96.2) no description available & (reliability: 1282.0) & (original description: Putative gbp3, Description = Putative WD repeat-containing protein C2A9.03, PFAM = PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf02227_419812-448796' '(at5g17250 : 974.0) Alkaline-phosphatase-like family protein; FUNCTIONS IN: transferase activity, catalytic activity; INVOLVED IN: GPI anchor biosynthetic process, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase (InterPro:IPR002591), Alkaline-phosphatase-like, core domain (InterPro:IPR017850); BEST Arabidopsis thaliana protein match is: Alkaline-phosphatase-like family protein (TAIR:AT2G22530.1); Has 1431 Blast hits to 1201 proteins in 306 species: Archae - 0; Bacteria - 228; Metazoa - 476; Fungi - 488; Plants - 85; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink). & (gnl|cdd|37337 : 555.0) no description available & (gnl|cdd|31713 : 83.0) no description available & (reliability: 1948.0) & (original description: Putative At5g17250, Description = Alkaline-phosphatase-like protein, PFAM = PF01663)' T '35.1' 'not assigned.no ontology' 'niben101scf02232_271658-281959' '(at1g30000 : 880.0) alpha-mannosidase 3 (MNS3); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 47 (InterPro:IPR001382); BEST Arabidopsis thaliana protein match is: alpha-mannosidase 2 (TAIR:AT3G21160.1); Has 2086 Blast hits to 1880 proteins in 193 species: Archae - 0; Bacteria - 12; Metazoa - 798; Fungi - 875; Plants - 191; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (gnl|cdd|37642 : 633.0) no description available & (gnl|cdd|85516 : 432.0) no description available & (reliability: 1760.0) & (original description: Putative MNS3, Description = Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS3, PFAM = PF01532)' T '35.1' 'not assigned.no ontology' 'niben101scf02237_941270-961095' '(at1g18340 : 368.0) basal transcription factor complex subunit-related; FUNCTIONS IN: general RNA polymerase II transcription factor activity; INVOLVED IN: DNA repair, regulation of transcription, DNA-dependent; LOCATED IN: core TFIIH complex; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor Tfb4 (InterPro:IPR004600); Has 359 Blast hits to 354 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi - 143; Plants - 47; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (gnl|cdd|67463 : 250.0) no description available & (gnl|cdd|37698 : 191.0) no description available & (reliability: 736.0) & (original description: Putative TFB4, Description = RNA polymerase II transcription factor B subunit 4, PFAM = PF03850)' T '35.1' 'not assigned.no ontology' 'niben101scf02240_640902-653064' '(at1g80770 : 521.0) pigment defective 318 (PDE318); FUNCTIONS IN: GTP binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), Nucleolar GTP-binding 1 (InterPro:IPR010674); BEST Arabidopsis thaliana protein match is: Nucleolar GTP-binding protein (TAIR:AT1G10300.1). & (gnl|cdd|36703 : 308.0) no description available & (gnl|cdd|57980 : 192.0) no description available & (reliability: 1042.0) & (original description: Putative NOG1, Description = Nucleolar GTP-binding protein 1-like protein, PFAM = PF06858;PF02421)' T '35.1' 'not assigned.no ontology' 'niben101scf02247_117221-125860' '(at1g48540 : 645.0) Outer arm dynein light chain 1 protein; BEST Arabidopsis thaliana protein match is: Outer arm dynein light chain 1 protein (TAIR:AT3G17920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37070 : 548.0) no description available & (reliability: 1290.0) & (original description: Putative glysoja_028667, Description = Serine/threonine-protein kinase 11-interacting protein, PFAM = PF12799)' T '35.1' 'not assigned.no ontology' 'niben101scf02249_599927-606672' '(at5g16730 : 282.0) LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545), Spectrin/alpha-actinin (InterPro:IPR018159); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT3G02930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 564.0) & (original description: Putative At5g16730, Description = WEB family protein At5g16730, chloroplastic, PFAM = PF05701)' T '35.1' 'not assigned.no ontology' 'niben101scf02250_122158-159923' '(at3g06290 : 1005.0) SAC3/GANP/Nin1/mts3/eIF-3 p25 family; CONTAINS InterPro DOMAIN/s: SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); BEST Arabidopsis thaliana protein match is: SAC3/GANP/Nin1/mts3/eIF-3 p25 family (TAIR:AT3G54380.1); Has 1557 Blast hits to 1047 proteins in 222 species: Archae - 0; Bacteria - 35; Metazoa - 487; Fungi - 321; Plants - 148; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink). & (gnl|cdd|37071 : 356.0) no description available & (gnl|cdd|34683 : 157.0) no description available & (reliability: 2010.0) & (original description: Putative BnaA03g29360D, Description = BnaA03g29360D protein, PFAM = PF03399)' T '35.1' 'not assigned.no ontology' 'niben101scf02253_660563-665157' '(at5g62740 : 482.0) HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1 (HIR1); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT1G69840.7); Has 5648 Blast hits to 5647 proteins in 1784 species: Archae - 171; Bacteria - 3783; Metazoa - 267; Fungi - 306; Plants - 270; Viruses - 3; Other Eukaryotes - 848 (source: NCBI BLink). & (gnl|cdd|37831 : 362.0) no description available & (gnl|cdd|48219 : 356.0) no description available & (reliability: 964.0) & (original description: Putative hir2, Description = Hypersensitive-induced reaction protein 2, PFAM = PF01145)' T '35.1' 'not assigned.no ontology' 'niben101scf02298_162336-169664' '(at4g21220 : 306.0) Trimeric LpxA-like enzymes superfamily protein; FUNCTIONS IN: transferase activity; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: Trimeric LpxA-like enzymes superfamily protein (TAIR:AT4G05210.1); Has 11236 Blast hits to 11169 proteins in 1804 species: Archae - 57; Bacteria - 7331; Metazoa - 7; Fungi - 9; Plants - 63; Viruses - 0; Other Eukaryotes - 3769 (source: NCBI BLink). & (gnl|cdd|80772 : 233.0) no description available & (reliability: 612.0) & (original description: Putative fabZ, Description = UDP-3-O-acylglucosamine N-acyltransferase, PFAM = PF00132)' T '35.1' 'not assigned.no ontology' 'niben101scf02302_10189-16754' '(at5g22460 : 368.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, vacuole, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G36290.1); Has 868 Blast hits to 866 proteins in 213 species: Archae - 4; Bacteria - 450; Metazoa - 1; Fungi - 48; Plants - 316; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 736.0) & (original description: Putative At5g22460, Description = Esterase/lipase/thioesterase family protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf02312_447407-450960' '(at2g19870 : 485.0) tRNA/rRNA methyltransferase (SpoU) family protein; FUNCTIONS IN: methyltransferase activity, RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537), RNA methyltransferase TrmH, group 3 (InterPro:IPR004441), RNA 2-O ribose methyltransferase, substrate binding (InterPro:IPR013123); Has 11661 Blast hits to 11576 proteins in 2636 species: Archae - 7; Bacteria - 7686; Metazoa - 749; Fungi - 216; Plants - 206; Viruses - 3; Other Eukaryotes - 2794 (source: NCBI BLink). & (gnl|cdd|36056 : 222.0) no description available & (gnl|cdd|30912 : 168.0) no description available & (reliability: 970.0) & (original description: Putative TCM_037786, Description = TRNA/rRNA methyltransferase family protein, PFAM = PF08032;PF00588)' T '35.1' 'not assigned.no ontology' 'niben101scf02316_42299-49737' '(at1g06890 : 490.0) nodulin MtN21 /EamA-like transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide/sugar transporter family protein (TAIR:AT2G30460.2). & (gnl|cdd|36654 : 202.0) no description available & (gnl|cdd|66803 : 99.9) no description available & (reliability: 980.0) & (original description: Putative At1g06890, Description = Uncharacterized membrane protein At1g06890, PFAM = PF03151)' T '35.1' 'not assigned.no ontology' 'niben101scf02322_98169-102177' '(at2g26490 : 552.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G34380.1); Has 38085 Blast hits to 18995 proteins in 635 species: Archae - 34; Bacteria - 5266; Metazoa - 14476; Fungi - 8827; Plants - 4594; Viruses - 0; Other Eukaryotes - 4888 (source: NCBI BLink). & (gnl|cdd|29257 : 141.0) no description available & (gnl|cdd|35495 : 90.9) no description available & (reliability: 1104.0) & (original description: Putative wdrp, Description = Transducin/WD40 repeat protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf02334_147921-155997' '(at1g63980 : 279.0) D111/G-patch domain-containing protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D111/G-patch (InterPro:IPR000467); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38020 : 112.0) no description available & (reliability: 558.0) & (original description: Putative Sb01g048840, Description = Putative uncharacterized protein Sb01g048840, PFAM = PF01585)' T '35.1' 'not assigned.no ontology' 'niben101scf02340_834977-837939' '(at1g11090 : 466.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G47630.1); Has 3873 Blast hits to 3868 proteins in 1106 species: Archae - 36; Bacteria - 2649; Metazoa - 131; Fungi - 140; Plants - 451; Viruses - 35; Other Eukaryotes - 431 (source: NCBI BLink). & (gnl|cdd|36668 : 391.0) no description available & (gnl|cdd|32448 : 145.0) no description available & (reliability: 932.0) & (original description: Putative CSE, Description = Caffeoylshikimate esterase, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'niben101scf02340_1033478-1045555' '(at1g61150 : 334.0) LisH and RanBPM domains containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein, CRA domain (InterPro:IPR019589), CTLH, C-terminal LisH motif (InterPro:IPR006595), Ran binding protein-like, CRA domain (InterPro:IPR013144); BEST Arabidopsis thaliana protein match is: LisH and RanBPM domains containing protein (TAIR:AT4G09300.1); Has 726 Blast hits to 711 proteins in 198 species: Archae - 0; Bacteria - 50; Metazoa - 282; Fungi - 123; Plants - 213; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|37870 : 240.0) no description available & (reliability: 668.0) & (original description: Putative GID8, Description = Glucose-induced degradation protein 8 homolog, PFAM = PF10607;PF08513)' T '35.1' 'not assigned.no ontology' 'niben101scf02356_53582-58482' '(at1g08800 : 174.0) Protein of unknown function, DUF593; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT2G30690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68159 : 115.0) no description available & (reliability: 348.0) & (original description: Putative BnaA08g26760D, Description = BnaA08g26760D protein, PFAM = PF04576)' T '35.1' 'not assigned.no ontology' 'niben101scf02366_280389-286960' '(at3g50690 : 226.0) Leucine-rich repeat (LRR) family protein; BEST Arabidopsis thaliana protein match is: U2 small nuclear ribonucleoprotein A (TAIR:AT1G09760.1); Has 87837 Blast hits to 40058 proteins in 1793 species: Archae - 912; Bacteria - 10630; Metazoa - 29004; Fungi - 15487; Plants - 5654; Viruses - 1023; Other Eukaryotes - 25127 (source: NCBI BLink). & (q6ysf3|an32_orysa : 204.0) Acidic leucine-rich nuclear phosphoprotein 32-related protein (ANP32/acidic nuclear phosphoprotein-like protein) - Oryza sativa (Rice) & (gnl|cdd|37950 : 94.7) no description available & (reliability: 452.0) & (original description: Putative At3g50690, Description = Acidic leucine-rich nuclear phosphoprotein 32-related protein, PFAM = PF14580)' T '35.1' 'not assigned.no ontology' 'niben101scf02368_99635-108293' '(at1g12640 : 617.0) MBOAT (membrane bound O-acyl transferase) family protein; FUNCTIONS IN: acyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); BEST Arabidopsis thaliana protein match is: MBOAT (membrane bound O-acyl transferase) family protein (TAIR:AT1G63050.1); Has 1204 Blast hits to 1199 proteins in 313 species: Archae - 0; Bacteria - 269; Metazoa - 625; Fungi - 142; Plants - 47; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink). & (gnl|cdd|37915 : 417.0) no description available & (gnl|cdd|34801 : 189.0) no description available & (reliability: 1234.0) & (original description: Putative LPLAT1, Description = Lysophospholipid acyltransferase 1, PFAM = PF03062)' T '35.1' 'not assigned.no ontology' 'niben101scf02372_33920-36426' '(at5g26600 : 246.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT3G62130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36762 : 125.0) no description available & (reliability: 492.0) & (original description: Putative cef1, Description = Isopenicillin N epimerase, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf02372_55412-66761' '(at4g20325 : 321.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit B (InterPro:IPR019024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|88013 : 137.0) no description available & (gnl|cdd|39903 : 95.5) no description available & (reliability: 642.0) & (original description: Putative At4g20325, Description = Ribonuclease H2 subunit B domain-containing protein, PFAM = PF09468)' T '35.1' 'not assigned.no ontology' 'niben101scf02374_43098-52034' '(gnl|cdd|30370 : 282.0) no description available & (at5g58770 : 265.0) Undecaprenyl pyrophosphate synthetase family protein; FUNCTIONS IN: dehydrodolichyl diphosphate synthase activity; INVOLVED IN: dolichol biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Di-trans-poly-cis-decaprenylcistransferase-like, conserved site (InterPro:IPR018520), Di-trans-poly-cis-decaprenylcistransferase-like (InterPro:IPR001441); BEST Arabidopsis thaliana protein match is: Undecaprenyl pyrophosphate synthetase family protein (TAIR:AT5G58782.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36815 : 232.0) no description available & (reliability: 530.0) & (original description: Putative ZFPS, Description = (2Z,6Z)-farnesyl diphosphate synthase, chloroplastic, PFAM = PF01255)' T '35.1' 'not assigned.no ontology' 'niben101scf02380_142351-161494' '(at5g05460 : 726.0) Glycosyl hydrolase family 85 ; FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 85 (InterPro:IPR005201), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 85 (TAIR:AT3G11040.1); Has 480 Blast hits to 472 proteins in 209 species: Archae - 0; Bacteria - 262; Metazoa - 108; Fungi - 28; Plants - 47; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|37542 : 515.0) no description available & (gnl|cdd|67272 : 340.0) no description available & (reliability: 1452.0) & (original description: Putative ENGASE2, Description = Cytosolic endo-beta-N-acetylglucosaminidase 2, PFAM = PF03644)' T '35.1' 'not assigned.no ontology' 'niben101scf02413_142627-148354' '(at4g25830 : 108.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G35760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative XL3, Description = CASP-like protein, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf02420_854083-857241' '(at5g62180 : 267.0) carboxyesterase 20 (CXE20); INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G45600.1); Has 9350 Blast hits to 9331 proteins in 1590 species: Archae - 113; Bacteria - 5436; Metazoa - 449; Fungi - 960; Plants - 1345; Viruses - 3; Other Eukaryotes - 1044 (source: NCBI BLink). & (gnl|cdd|36728 : 226.0) no description available & (gnl|cdd|87389 : 155.0) no description available & (q6l545|gid1_orysa : 114.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 534.0) & (original description: Putative est, Description = Esterase, PFAM = PF07859)' T '35.1' 'not assigned.no ontology' 'niben101scf02425_262735-274597' '(at5g12040 : 482.0) Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein; FUNCTIONS IN: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, zinc ion binding; INVOLVED IN: nitrogen compound metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010); BEST Arabidopsis thaliana protein match is: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein (TAIR:AT4G08790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36024 : 303.0) no description available & (gnl|cdd|30737 : 203.0) no description available & (reliability: 964.0) & (original description: Putative NLP3, Description = Omega-amidase, chloroplastic, PFAM = PF00795)' T '35.1' 'not assigned.no ontology' 'niben101scf02429_522938-526833' '(at3g24080 : 181.0) KRR1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: KRR1 interacting protein 1, subgroup (InterPro:IPR007851), KRR1 interacting protein 1 (InterPro:IPR018034); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37620 : 151.0) no description available & (reliability: 362.0) & (original description: Putative At3g24080, Description = KRR1 family protein, PFAM = PF05178;PF12936)' T '35.1' 'not assigned.no ontology' 'niben101scf02429_584721-590711' '(at2g41705 : 395.0) camphor resistance CrcB family protein; CONTAINS InterPro DOMAIN/s: Camphor resistance CrcB protein (InterPro:IPR003691); Has 1596 Blast hits to 1594 proteins in 702 species: Archae - 22; Bacteria - 1268; Metazoa - 2; Fungi - 87; Plants - 37; Viruses - 0; Other Eukaryotes - 180 (source: NCBI BLink). & (reliability: 790.0) & (original description: Putative BnaC04g02030D, Description = BnaC04g02030D protein, PFAM = PF02537;PF02537)' T '35.1' 'not assigned.no ontology' 'niben101scf02430_327236-330219' '(at2g38480 : 154.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G36330.1); Has 221 Blast hits to 221 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 221; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68120 : 80.8) no description available & (reliability: 308.0) & (original description: Putative At2g38480, Description = CASP-like protein 4B1, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf02435_94958-126383' '(at4g33540 : 393.0) metallo-beta-lactamase family protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: response to arsenic, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); Has 1592 Blast hits to 1592 proteins in 436 species: Archae - 145; Bacteria - 835; Metazoa - 30; Fungi - 10; Plants - 78; Viruses - 0; Other Eukaryotes - 494 (source: NCBI BLink). & (reliability: 786.0) & (original description: Putative Sb04g038260, Description = Putative uncharacterized protein Sb04g038260, PFAM = PF00753;PF13370)' T '35.1' 'not assigned.no ontology' 'niben101scf02446_3045-9631' '(at4g36530 : 495.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G19850.1); Has 21771 Blast hits to 21766 proteins in 2265 species: Archae - 246; Bacteria - 15770; Metazoa - 624; Fungi - 315; Plants - 912; Viruses - 5; Other Eukaryotes - 3899 (source: NCBI BLink). & (gnl|cdd|36667 : 178.0) no description available & (gnl|cdd|30941 : 118.0) no description available & (reliability: 990.0) & (original description: Putative mhpC, Description = Alpha/beta superfamily hydrolase, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf02451_23781-34417' '(at3g56120 : 483.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Met10 (InterPro:IPR003402); BEST Arabidopsis thaliana protein match is: Met-10+ like family protein (TAIR:AT4G27340.1); Has 1391 Blast hits to 1232 proteins in 427 species: Archae - 416; Bacteria - 202; Metazoa - 266; Fungi - 150; Plants - 114; Viruses - 0; Other Eukaryotes - 243 (source: NCBI BLink). & (gnl|cdd|37289 : 223.0) no description available & (gnl|cdd|66190 : 167.0) no description available & (reliability: 966.0) & (original description: Putative trm5, Description = tRNA (guanine(37)-N1)-methyltransferase, PFAM = PF02475)' T '35.1' 'not assigned.no ontology' 'niben101scf02451_127627-134584' '(at3g24420 : 307.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G37470.1); Has 7600 Blast hits to 7598 proteins in 1433 species: Archae - 43; Bacteria - 6108; Metazoa - 134; Fungi - 45; Plants - 270; Viruses - 2; Other Eukaryotes - 998 (source: NCBI BLink). & (gnl|cdd|30941 : 98.6) no description available & (reliability: 614.0) & (original description: Putative hyd2, Description = Sigma factor sigb regulation protein rsbq, putative, PFAM = PF00561)' T '35.1' 'not assigned.no ontology' 'niben101scf02455_205687-219127' '(at1g15740 : 541.0) Leucine-rich repeat family protein; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G23840.1); Has 38052 Blast hits to 19856 proteins in 856 species: Archae - 6; Bacteria - 8624; Metazoa - 11681; Fungi - 680; Plants - 12072; Viruses - 79; Other Eukaryotes - 4910 (source: NCBI BLink). & (gnl|cdd|39396 : 83.9) no description available & (reliability: 1082.0) & (original description: Putative PGSC0003DMG400030688, Description = F-box/LRR-repeat protein 14, PFAM = PF13516;PF13516;PF13516;PF13516;PF13516;PF13516;PF13855;PF13855;PF13855)' T '35.1' 'not assigned.no ontology' 'niben101scf02461_293571-303386' '(at3g12760 : 398.0) CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast hits to 855 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (gnl|cdd|38287 : 282.0) no description available & (gnl|cdd|86365 : 140.0) no description available & (reliability: 796.0) & (original description: Putative DCUN1D1, Description = DCN1-like protein 1, PFAM = PF14555;PF03556)' T '35.1' 'not assigned.no ontology' 'niben101scf02466_378488-388372' '(at5g02410 : 516.0) DIE2/ALG10 family; FUNCTIONS IN: transferase activity, transferring hexosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-1, 2 glucosyltransferase Alg10 (InterPro:IPR016900), Glycosyltransferase, ALG10 (InterPro:IPR007006); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68494 : 299.0) no description available & (gnl|cdd|37853 : 249.0) no description available & (reliability: 1032.0) & (original description: Putative ALG10, Description = Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase, PFAM = PF04922)' T '35.1' 'not assigned.no ontology' 'niben101scf02468_228851-236249' '(at5g04420 : 543.0) Galactose oxidase/kelch repeat superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 4 (TAIR:AT3G05420.1); Has 8531 Blast hits to 4263 proteins in 348 species: Archae - 19; Bacteria - 246; Metazoa - 3206; Fungi - 1070; Plants - 1911; Viruses - 10; Other Eukaryotes - 2069 (source: NCBI BLink). & (gnl|cdd|35600 : 240.0) no description available & (reliability: 1086.0) & (original description: Putative ACBP4, Description = Acyl-CoA-binding domain-containing protein 4, PFAM = PF13415;PF07646;PF01344)' T '35.1' 'not assigned.no ontology' 'niben101scf02468_588363-595954' '(at3g10420 : 735.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73170.1); Has 1500 Blast hits to 1489 proteins in 625 species: Archae - 20; Bacteria - 1170; Metazoa - 12; Fungi - 5; Plants - 122; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). & (gnl|cdd|33644 : 266.0) no description available & (reliability: 1470.0) & (original description: Putative ycf45, Description = Uncharacterized protein ycf45, PFAM = PF00004)' T '35.1' 'not assigned.no ontology' 'niben101scf02468_1088781-1094078' '(at3g44190 : 434.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT5G22140.1); Has 14374 Blast hits to 14371 proteins in 2395 species: Archae - 444; Bacteria - 11667; Metazoa - 157; Fungi - 716; Plants - 246; Viruses - 0; Other Eukaryotes - 1144 (source: NCBI BLink). & (gnl|cdd|37706 : 213.0) no description available & (gnl|cdd|31444 : 151.0) no description available & (reliability: 868.0) & (original description: Putative At5g22140, Description = FAD/NAD(P)-binding oxidoreductase family protein, PFAM = PF07992)' T '35.1' 'not assigned.no ontology' 'niben101scf02468_1473559-1481103' '(at4g32605 : 215.0) Mitochondrial glycoprotein family protein; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: Mitochondrial glycoprotein family protein (TAIR:AT3G55605.1); Has 330 Blast hits to 330 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 99; Plants - 196; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|37747 : 142.0) no description available & (reliability: 430.0) & (original description: Putative BnaA01g04430D, Description = BnaA01g04430D protein, PFAM = PF02330)' T '35.1' 'not assigned.no ontology' 'niben101scf02470_30438-44113' '(at3g05940 : 590.0) Protein of unknown function (DUF300); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT5G26740.3); Has 926 Blast hits to 920 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 354; Fungi - 191; Plants - 245; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (gnl|cdd|37852 : 328.0) no description available & (gnl|cdd|67249 : 327.0) no description available & (reliability: 1144.0) & (original description: Putative At5g26734, Description = AT5G26740 protein, PFAM = PF03619)' T '35.1' 'not assigned.no ontology' 'niben101scf02470_36954-39803' '(at3g05940 : 237.0) Protein of unknown function (DUF300); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT5G26740.3); Has 926 Blast hits to 920 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 354; Fungi - 191; Plants - 245; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (gnl|cdd|67249 : 179.0) no description available & (gnl|cdd|37852 : 157.0) no description available & (reliability: 470.0) & (original description: Putative Sdmg1, Description = Transmembrane protein 184A, PFAM = PF03619)' T '35.1' 'not assigned.no ontology' 'niben101scf02474_326807-329787' '(at1g52530 : 470.0) CONTAINS InterPro DOMAIN/s: Hus1-like protein (InterPro:IPR007150); Has 129 Blast hits to 128 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 57; Fungi - 10; Plants - 47; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|39202 : 244.0) no description available & (reliability: 940.0) & (original description: Putative Sb06g023290, Description = Putative uncharacterized protein Sb06g023290, PFAM = PF04005)' T '35.1' 'not assigned.no ontology' 'niben101scf02479_170132-179972' '(at3g54130 : 335.0) Josephin family protein; CONTAINS InterPro DOMAIN/s: Machado-Joseph disease protein MJD (InterPro:IPR006155); BEST Arabidopsis thaliana protein match is: JOSEPHIN-like protein (TAIR:AT2G29640.1); Has 590 Blast hits to 584 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 441; Fungi - 14; Plants - 76; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (q8lq36|atx3_orysa : 324.0) Putative ataxin-3 homolog (EC 3.4.22.-) - Oryza sativa (Rice) & (gnl|cdd|38146 : 267.0) no description available & (gnl|cdd|65850 : 131.0) no description available & (reliability: 670.0) & (original description: Putative At3g54130, Description = Ataxin-3 homolog, PFAM = PF02099)' T '35.1' 'not assigned.no ontology' 'niben101scf02479_273416-278459' '(at2g37960 : 236.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54060.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative TCM_021789, Description = DNA double-strand break repair rad50 ATPase, putative isoform 1, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf02494_497142-500191' '(at5g51550 : 493.0) EXORDIUM like 3 (EXL3); CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: EXORDIUM like 5 (TAIR:AT2G17230.1); Has 398 Blast hits to 397 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68252 : 360.0) no description available & (reliability: 986.0) & (original description: Putative EXL3, Description = Protein EXORDIUM-like 3, PFAM = PF04674)' T '35.1' 'not assigned.no ontology' 'niben101scf02494_1044088-1055626' '(at5g51570 : 485.0) SPFH/Band 7/PHB domain-containing membrane-associated protein family; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT5G62740.1); Has 5870 Blast hits to 5870 proteins in 1885 species: Archae - 189; Bacteria - 4209; Metazoa - 145; Fungi - 209; Plants - 268; Viruses - 20; Other Eukaryotes - 830 (source: NCBI BLink). & (gnl|cdd|37831 : 350.0) no description available & (gnl|cdd|48219 : 346.0) no description available & (reliability: 970.0) & (original description: Putative HIR4, Description = Hypersensitive-induced response protein 4, PFAM = PF01145)' T '35.1' 'not assigned.no ontology' 'niben101scf02497_188900-201261' '(at4g00560 : 425.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: dTDP-4-dehydrorhamnose reductase activity, binding, catalytic activity; INVOLVED IN: extracellular polysaccharide biosynthetic process, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), dTDP-4-dehydrorhamnose reductase (InterPro:IPR005913). & (gnl|cdd|31288 : 158.0) no description available & (gnl|cdd|36643 : 115.0) no description available & (reliability: 850.0) & (original description: Putative glysoja_034651, Description = Methionine adenosyltransferase 2 subunit beta, PFAM = PF04321)' T '35.1' 'not assigned.no ontology' 'niben101scf02502_1257667-1270758' '(at5g11560 : 1278.0) catalytics; FUNCTIONS IN: catalytic activity; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1620 (InterPro:IPR011678), Quinonprotein alcohol dehydrogenase-like (InterPro:IPR011047); Has 475 Blast hits to 428 proteins in 206 species: Archae - 4; Bacteria - 52; Metazoa - 151; Fungi - 150; Plants - 40; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (gnl|cdd|37314 : 736.0) no description available & (gnl|cdd|87370 : 356.0) no description available & (reliability: 2556.0) & (original description: Putative At5g11560, Description = PQQ_DH domain-containing protein, PFAM = PF13360;PF07774)' T '35.1' 'not assigned.no ontology' 'niben101scf02508_301777-316308' '(at3g23980 : 289.0) Encodes a protein that interacts with the Polycomb-group (Pc-G) histone methyltransferase CLF (CURLY LEAF). It colocalizes with CLF to the nucleus and represses a subset of Pc-G target genes. The pleiotropic developmental mutant phenotype suggests that BLI prevents premature differentiation.; BLISTER (BLI); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: flower development, seed development, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 32015 Blast hits to 19612 proteins in 1632 species: Archae - 290; Bacteria - 4748; Metazoa - 14972; Fungi - 3061; Plants - 1469; Viruses - 92; Other Eukaryotes - 7383 (source: NCBI BLink). & (reliability: 578.0) & (original description: Putative BnaC03g43540D, Description = BnaC03g43540D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf02513_415140-422973' '(at5g64170 : 176.0) dentin sialophosphoprotein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54500.2); Has 181 Blast hits to 169 proteins in 40 species: Archae - 2; Bacteria - 18; Metazoa - 17; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'niben101scf02513_987479-993403' '(at1g30550 : 315.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: RNA capping, RNA methylation; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA cap guanine-N2 methyltransferase (InterPro:IPR019012); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G45231.2); Has 993 Blast hits to 983 proteins in 439 species: Archae - 68; Bacteria - 468; Metazoa - 130; Fungi - 137; Plants - 48; Viruses - 3; Other Eukaryotes - 139 (source: NCBI BLink). & (gnl|cdd|87990 : 256.0) no description available & (gnl|cdd|37941 : 234.0) no description available & (reliability: 630.0) & (original description: Putative TGS1, Description = Trimethylguanosine synthase, PFAM = PF09445)' T '35.1' 'not assigned.no ontology' 'niben101scf02525_466488-477767' '(at4g14310 : 645.0) Transducin/WD40 repeat-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: male gametophyte; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046); Has 1761 Blast hits to 1518 proteins in 267 species: Archae - 12; Bacteria - 193; Metazoa - 625; Fungi - 156; Plants - 91; Viruses - 5; Other Eukaryotes - 679 (source: NCBI BLink). & (reliability: 1290.0) & (original description: Putative dl3195c, Description = Transducin/WD40 domain-containing protein-like protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf02530_15610-19176' '(at5g51920 : 92.4) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22980.1); Has 991 Blast hits to 937 proteins in 281 species: Archae - 6; Bacteria - 292; Metazoa - 116; Fungi - 152; Plants - 275; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative Ccrd_015906, Description = Pyridoxal phosphate-dependent transferase, major region, subdomain 1, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf02537_133480-136430' '(at1g78310 : 86.3) VQ motif-containing protein; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT2G35230.1); Has 2188 Blast hits to 1760 proteins in 229 species: Archae - 0; Bacteria - 55; Metazoa - 822; Fungi - 398; Plants - 644; Viruses - 80; Other Eukaryotes - 189 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative VQ9, Description = VQ motif-containing protein 9, PFAM = PF05678)' T '35.1' 'not assigned.no ontology' 'niben101scf02538_50268-64365' '(at1g61000 : 328.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Kinetochore protein Nuf2 (InterPro:IPR005549); Has 50972 Blast hits to 29793 proteins in 2070 species: Archae - 902; Bacteria - 7404; Metazoa - 23628; Fungi - 4156; Plants - 2312; Viruses - 158; Other Eukaryotes - 12412 (source: NCBI BLink). & (gnl|cdd|39639 : 161.0) no description available & (reliability: 656.0) & (original description: Putative At1g61000, Description = Nuf2 domain-containing protein, PFAM = PF03800)' T '35.1' 'not assigned.no ontology' 'niben101scf02540_205179-224617' '(at2g18840 : 279.0) Integral membrane Yip1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Yip1 domain (InterPro:IPR006977); BEST Arabidopsis thaliana protein match is: Integral membrane Yip1 family protein (TAIR:AT4G30260.1); Has 825 Blast hits to 825 proteins in 200 species: Archae - 0; Bacteria - 0; Metazoa - 402; Fungi - 189; Plants - 114; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|38157 : 237.0) no description available & (gnl|cdd|86741 : 103.0) no description available & (reliability: 558.0) & (original description: Putative At2g18840, Description = Protein YIPF, PFAM = PF04893)' T '35.1' 'not assigned.no ontology' 'niben101scf02543_215935-222482' '(at5g42570 : 204.0) B-cell receptor-associated 31-like; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: B-cell receptor-associated protein 31-like (TAIR:AT1G11905.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37173 : 123.0) no description available & (reliability: 408.0) & (original description: Putative At1g11905, Description = B-cell receptor-associated protein 31-like protein, PFAM = PF05529)' T '35.1' 'not assigned.no ontology' 'niben101scf02552_102604-128322' '(gnl|cdd|47984 : 110.0) no description available & (at4g35890 : 98.2) winged-helix DNA-binding transcription factor family protein; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT5G66100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative Larp, Description = LA-related protein 6 LA RNA-binding domain protein, PFAM = PF05383)' T '35.1' 'not assigned.no ontology' 'niben101scf02562_360463-362972' '(at5g11090 : 89.0) serine-rich protein-related; BEST Arabidopsis thaliana protein match is: serine-rich protein-related (TAIR:AT5G25280.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative , Description = Dual specificity tyrosine-phosphorylation-regulated kinase-like, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf02562_365589-375031' '(at1g15740 : 491.0) Leucine-rich repeat family protein; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G23840.1); Has 38052 Blast hits to 19856 proteins in 856 species: Archae - 6; Bacteria - 8624; Metazoa - 11681; Fungi - 680; Plants - 12072; Viruses - 79; Other Eukaryotes - 4910 (source: NCBI BLink). & (gnl|cdd|39396 : 84.3) no description available & (reliability: 982.0) & (original description: Putative PGSC0003DMG400030688, Description = F-box/LRR-repeat protein 14, PFAM = PF13516;PF13516;PF13516;PF13516;PF13855)' T '35.1' 'not assigned.no ontology' 'niben101scf02564_970901-978920' '(gnl|cdd|37401 : 199.0) no description available & (at1g51580 : 187.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 6723 Blast hits to 3876 proteins in 329 species: Archae - 3; Bacteria - 266; Metazoa - 4280; Fungi - 575; Plants - 1237; Viruses - 20; Other Eukaryotes - 342 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative PGSC0003DMG400004937, Description = KH domain-containing protein, PFAM = PF00013;PF00013;PF00013;PF00013;PF00013)' T '35.1' 'not assigned.no ontology' 'niben101scf02565_60433-80199' '(at3g49200 : 392.0) O-acyltransferase (WSD1-like) family protein; CONTAINS InterPro DOMAIN/s: O-acyltransferase, WSD1, C-terminal (InterPro:IPR009721), O-acyltransferase, WSD1, N-terminal (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT3G49210.1); Has 1205 Blast hits to 1195 proteins in 171 species: Archae - 2; Bacteria - 951; Metazoa - 8; Fungi - 0; Plants - 226; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|70441 : 211.0) no description available & (reliability: 770.0) & (original description: Putative Os01g0770000, Description = Os01g0770000 protein, PFAM = PF03007;PF06974)' T '35.1' 'not assigned.no ontology' 'niben101scf02565_208081-221630' '(at4g01040 : 520.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, chitinase activity, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Chitinase II (InterPro:IPR011583), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 828 Blast hits to 823 proteins in 284 species: Archae - 0; Bacteria - 578; Metazoa - 178; Fungi - 2; Plants - 34; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|37302 : 386.0) no description available & (gnl|cdd|47913 : 107.0) no description available & (reliability: 1040.0) & (original description: Putative CHID1, Description = Chitinase domain-containing protein 1, PFAM = PF00704)' T '35.1' 'not assigned.no ontology' 'niben101scf02569_129744-138270' '(at4g12230 : 505.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); Has 1478 Blast hits to 1473 proteins in 564 species: Archae - 10; Bacteria - 1101; Metazoa - 104; Fungi - 4; Plants - 47; Viruses - 3; Other Eukaryotes - 209 (source: NCBI BLink). & (reliability: 1010.0) & (original description: Putative spg21, Description = Maspardin, PFAM = PF00561)' T '35.1' 'not assigned.no ontology' 'niben101scf02572_215750-230868' '(at3g16230 : 439.0) Predicted eukaryotic LigT; FUNCTIONS IN: RNA binding, catalytic activity; INVOLVED IN: RNA metabolic process, regulation of transcription; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088), Predicted eukaryotic LigT (InterPro:IPR009210), RNA ligase/cyclic nucleotide phosphodiesterase (InterPro:IPR009097), Protein kinase A anchor protein, nuclear localisation signal domain (InterPro:IPR019510); BEST Arabidopsis thaliana protein match is: Predicted eukaryotic LigT (TAIR:AT3G16220.1). & (gnl|cdd|38025 : 180.0) no description available & (reliability: 878.0) & (original description: Putative At3g16230, Description = Putative eukaryotic LigT protein, PFAM = PF10469;PF00013)' T '35.1' 'not assigned.no ontology' 'niben101scf02581_565723-573919' '(at1g10865 : 102.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase assembly protein PET191, N-terminal (InterPro:IPR018793); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative , Description = , PFAM = PF10203)' T '35.1' 'not assigned.no ontology' 'niben101scf02581_575651-580090' '(at1g16880 : 337.0) uridylyltransferase-related; INVOLVED IN: response to cold; LOCATED IN: chloroplast thylakoid membrane, stromule, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: ACT domain-containing protein (TAIR:AT5G04740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 674.0) & (original description: Putative ACR11, Description = DS12 from 2D-PAGE of leaf protein, putative, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf02583_231272-236923' '(at2g37730 : 580.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT3G11420.1); Has 511 Blast hits to 500 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 144; Plants - 279; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|68226 : 313.0) no description available & (gnl|cdd|37457 : 253.0) no description available & (reliability: 1160.0) & (original description: Putative GT31C5, Description = Glycosyltransferase-like protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben101scf02595_180347-263710' '(at1g58230 : 3301.0) binding; FUNCTIONS IN: binding; INVOLVED IN: signal transduction; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Beige/BEACH (InterPro:IPR000409), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein / beige-related (TAIR:AT2G45540.2); Has 12369 Blast hits to 8547 proteins in 474 species: Archae - 22; Bacteria - 2638; Metazoa - 4211; Fungi - 2289; Plants - 1295; Viruses - 0; Other Eukaryotes - 1914 (source: NCBI BLink). & (gnl|cdd|36998 : 547.0) no description available & (gnl|cdd|85884 : 461.0) no description available & (reliability: 6602.0) & (original description: Putative BCHB, Description = BEACH domain-containing protein B, PFAM = PF14844;PF02138;PF16057;PF15787;PF00400;PF00400;PF13385)' T '35.1' 'not assigned.no ontology' 'niben101scf02597_138766-148576' '(at3g06880 : 169.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: binding, nucleotide binding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781). & (gnl|cdd|29257 : 94.3) no description available & (reliability: 338.0) & (original description: Putative LIN, Description = Putative E3 ubiquitin-protein ligase LIN-1, PFAM = PF00400;PF00400;PF04564)' T '35.1' 'not assigned.no ontology' 'niben101scf02597_628648-656686' '(at2g41020 : 340.0) WW domain-containing protein; CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 680.0) & (original description: Putative pqbp1, Description = Polyglutamine-binding protein 1, PFAM = PF00397;PF00397)' T '35.1' 'not assigned.no ontology' 'niben101scf02625_414228-433723' '(at4g24710 : 636.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; EXPRESSED IN: shoot apex, embryo, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Chaperonin clpA/B (InterPro:IPR001270); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT3G53230.1); Has 23595 Blast hits to 21814 proteins in 2884 species: Archae - 1432; Bacteria - 8057; Metazoa - 4130; Fungi - 3211; Plants - 2291; Viruses - 16; Other Eukaryotes - 4458 (source: NCBI BLink). & (gnl|cdd|35963 : 473.0) no description available & (gnl|cdd|84432 : 115.0) no description available & (reliability: 1272.0) & (original description: Putative pch2, Description = Thyroid receptor-interacting protein 13, PFAM = PF00004)' T '35.1' 'not assigned.no ontology' 'niben101scf02635_630431-657166' '(at3g45770 : 469.0) Polyketide synthase, enoylreductase family protein; FUNCTIONS IN: copper ion binding, zinc ion binding, ATP binding; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: ARP protein (REF) (TAIR:AT1G49670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35248 : 410.0) no description available & (gnl|cdd|30949 : 178.0) no description available & (reliability: 938.0) & (original description: Putative mecr, Description = Trans-2-enoyl-CoA reductase, mitochondrial, PFAM = PF00107;PF08240)' T '35.1' 'not assigned.no ontology' 'niben101scf02638_239797-250907' '(at1g29810 : 206.0) Transcriptional coactivator/pterin dehydratase; FUNCTIONS IN: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity, dihydroxy-acid dehydratase activity; INVOLVED IN: tetrahydrobiopterin biosynthetic process; CONTAINS InterPro DOMAIN/s: Transcriptional coactivator/pterin dehydratase (InterPro:IPR001533); BEST Arabidopsis thaliana protein match is: Transcriptional coactivator/pterin dehydratase (TAIR:AT5G51110.1); Has 4058 Blast hits to 4056 proteins in 962 species: Archae - 80; Bacteria - 1882; Metazoa - 205; Fungi - 16; Plants - 92; Viruses - 0; Other Eukaryotes - 1783 (source: NCBI BLink). & (gnl|cdd|48349 : 107.0) no description available & (gnl|cdd|39276 : 98.5) no description available & (reliability: 412.0) & (original description: Putative pdl2, Description = PCD/DCoH-like protein 2, PFAM = PF01329)' T '35.1' 'not assigned.no ontology' 'niben101scf02638_273125-293546' '(at1g29850 : 105.0) double-stranded DNA-binding family protein; FUNCTIONS IN: double-stranded DNA binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding TFAR19-related protein (InterPro:IPR002836); Has 679 Blast hits to 679 proteins in 318 species: Archae - 256; Bacteria - 0; Metazoa - 134; Fungi - 121; Plants - 56; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|38641 : 95.0) no description available & (reliability: 210.0) & (original description: Putative pdcd5, Description = Programmed cell death 5, PFAM = PF01984)' T '35.1' 'not assigned.no ontology' 'niben101scf02638_359453-377877' '(at1g29120 : 465.0) Hydrolase-like protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G25770.1). & (gnl|cdd|39573 : 190.0) no description available & (gnl|cdd|68625 : 172.0) no description available & (reliability: 930.0) & (original description: Putative OSJNBb0122C16.16, Description = Expressed protein, PFAM = PF05057)' T '35.1' 'not assigned.no ontology' 'niben101scf02639_390225-411393' '(at5g61330 : 338.0) rRNA processing protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TRAUB (InterPro:IPR012617); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37984 : 192.0) no description available & (reliability: 676.0) & (original description: Putative Sb03g009240, Description = Putative uncharacterized protein Sb03g009240, PFAM = PF13339;PF08164)' T '35.1' 'not assigned.no ontology' 'niben101scf02639_546366-563175' '(at2g39340 : 645.0) SAC3/GANP/Nin1/mts3/eIF-3 p25 family; CONTAINS InterPro DOMAIN/s: SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37072 : 373.0) no description available & (gnl|cdd|67037 : 158.0) no description available & (reliability: 1290.0) & (original description: Putative Os05g0462600, Description = Os05g0462600 protein, PFAM = PF03399)' T '35.1' 'not assigned.no ontology' 'niben101scf02646_260347-269029' '(at5g07910 : 308.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30105.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35752 : 115.0) no description available & (reliability: 616.0) & (original description: Putative IRL7, Description = Plant intracellular Ras-group-related LRR protein 7, PFAM = PF13855)' T '35.1' 'not assigned.no ontology' 'niben101scf02653_426341-429309' '(gnl|cdd|37747 : 213.0) no description available & (at2g39795 : 198.0) Mitochondrial glycoprotein family protein; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: Mitochondrial glycoprotein family protein (TAIR:AT3G55605.1); Has 404 Blast hits to 404 proteins in 130 species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 117; Plants - 220; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|85957 : 100.0) no description available & (reliability: 396.0) & (original description: Putative At2g39795, Description = Uncharacterized protein At2g39795, mitochondrial, PFAM = PF02330)' T '35.1' 'not assigned.no ontology' 'niben101scf02658_242384-248545' '(at4g38650 : 627.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 10 protein (TAIR:AT4G38300.1); Has 2063 Blast hits to 2053 proteins in 438 species: Archae - 10; Bacteria - 1176; Metazoa - 20; Fungi - 357; Plants - 277; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (gnl|cdd|47910 : 195.0) no description available & (reliability: 1254.0) & (original description: Putative xyn3, Description = Xylanase 3, PFAM = PF00331)' T '35.1' 'not assigned.no ontology' 'niben101scf02658_245530-248560' '(at4g38650 : 147.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 10 protein (TAIR:AT4G38300.1); Has 2063 Blast hits to 2053 proteins in 438 species: Archae - 10; Bacteria - 1176; Metazoa - 20; Fungi - 357; Plants - 277; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative xyn3, Description = Endo-1,4-beta-xylanase A, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf02665_756129-760947' '(at1g07230 : 646.0) non-specific phospholipase C1 (NPC1); FUNCTIONS IN: hydrolase activity, acting on ester bonds; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C2 (TAIR:AT2G26870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67785 : 288.0) no description available & (reliability: 1292.0) & (original description: Putative Os01g0955000, Description = Os01g0955000 protein, PFAM = PF04185)' T '35.1' 'not assigned.no ontology' 'niben101scf02665_760262-765665' '(at1g07230 : 775.0) non-specific phospholipase C1 (NPC1); FUNCTIONS IN: hydrolase activity, acting on ester bonds; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C2 (TAIR:AT2G26870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67785 : 294.0) no description available & (reliability: 1550.0) & (original description: Putative NPC1, Description = Non-specific phospholipase C1, PFAM = PF04185)' T '35.1' 'not assigned.no ontology' 'niben101scf02665_1603136-1606191' '(at3g08640 : 370.0) Protein of unknown function (DUF3411); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3411) (TAIR:AT3G08630.1); Has 11715 Blast hits to 4977 proteins in 490 species: Archae - 4; Bacteria - 2620; Metazoa - 4563; Fungi - 550; Plants - 2459; Viruses - 100; Other Eukaryotes - 1419 (source: NCBI BLink). & (reliability: 740.0) & (original description: Putative Sb06g031280, Description = Putative uncharacterized protein Sb06g031280, PFAM = PF11891)' T '35.1' 'not assigned.no ontology' 'niben101scf02688_159526-178656' '(at3g20790 : 465.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase, N-terminal (InterPro:IPR000683), Oxidoreductase, C-terminal (InterPro:IPR004104), NAD(P)-binding domain (InterPro:IPR016040); Has 7400 Blast hits to 7400 proteins in 1508 species: Archae - 172; Bacteria - 5330; Metazoa - 189; Fungi - 322; Plants - 48; Viruses - 0; Other Eukaryotes - 1339 (source: NCBI BLink). & (gnl|cdd|37953 : 160.0) no description available & (gnl|cdd|31017 : 133.0) no description available & (reliability: 930.0) & (original description: Putative At3g20790, Description = NAD(P)-binding Rossmann-fold superfamily protein, PFAM = PF01408)' T '35.1' 'not assigned.no ontology' 'niben101scf02699_116245-124533' '(at4g02940 : 488.0) oxidoreductase, 2OG-Fe(II) oxygenase family protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to karrikin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT2G48080.1); Has 217 Blast hits to 213 proteins in 52 species: Archae - 0; Bacteria - 14; Metazoa - 24; Fungi - 16; Plants - 131; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|39378 : 229.0) no description available & (reliability: 976.0) & (original description: Putative BnaC09g00310D, Description = BnaC09g00310D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf02717_1325-3798' '(at5g42570 : 141.0) B-cell receptor-associated 31-like; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: B-cell receptor-associated protein 31-like (TAIR:AT1G11905.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37173 : 84.6) no description available & (reliability: 282.0) & (original description: Putative At1g11905, Description = B-cell receptor-associated 31-like protein, PFAM = PF05529)' T '35.1' 'not assigned.no ontology' 'niben101scf02720_1059147-1062248' '(at3g26510 : 139.0) Octicosapeptide/Phox/Bem1p family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: octicosapeptide/Phox/Bem1p (PB1) domain-containing protein (TAIR:AT1G70640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative ZOSMA_63G00310, Description = Octicosapeptide/Phox/Bem1p domain-containing protein kinase, PFAM = PF00564)' T '35.1' 'not assigned.no ontology' 'niben101scf02721_468492-474920' '(at2g04560 : 446.0) transferases, transferring glycosyl groups; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid A biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 19 (InterPro:IPR003835); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80456 : 256.0) no description available & (reliability: 892.0) & (original description: Putative lpxB, Description = Lipid-A-disaccharide synthase, PFAM = PF02684)' T '35.1' 'not assigned.no ontology' 'niben101scf02730_47563-52847' '(at2g36330 : 110.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT5G62820.1); Has 241 Blast hits to 239 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 1; Plants - 232; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative BnaC04g08960D, Description = CASP-like protein, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf02730_92404-104795' '(at5g40270 : 709.0) HD domain-containing metal-dependent phosphohydrolase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607); BEST Arabidopsis thaliana protein match is: HD domain-containing metal-dependent phosphohydrolase family protein (TAIR:AT5G40290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37892 : 516.0) no description available & (gnl|cdd|31276 : 193.0) no description available & (reliability: 1418.0) & (original description: Putative SAMHD1, Description = HD domain-containing metal-dependent phosphohydrolase family protein isoform 1, PFAM = PF01966)' T '35.1' 'not assigned.no ontology' 'niben101scf02740_310744-314464' '(at1g66680 : 224.0) unknown function; AR401; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 12 (InterPro:IPR013217); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G60910.1); Has 1054 Blast hits to 1053 proteins in 391 species: Archae - 16; Bacteria - 384; Metazoa - 157; Fungi - 144; Plants - 125; Viruses - 0; Other Eukaryotes - 228 (source: NCBI BLink). & (gnl|cdd|36485 : 142.0) no description available & (reliability: 448.0) & (original description: Putative AR401, Description = Protein-lysine N-methyltransferase AMTR_s00105p00145330, PFAM = PF13847)' T '35.1' 'not assigned.no ontology' 'niben101scf02749_383348-389199' '(at1g17430 : 293.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G72620.1); Has 4935 Blast hits to 4934 proteins in 1109 species: Archae - 58; Bacteria - 3571; Metazoa - 147; Fungi - 8; Plants - 323; Viruses - 0; Other Eukaryotes - 828 (source: NCBI BLink). & (gnl|cdd|36667 : 155.0) no description available & (gnl|cdd|30941 : 96.7) no description available & (reliability: 586.0) & (original description: Putative BnaA07g22990D, Description = BnaA07g22990D protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf02750_441209-450750' '(at5g07940 : 222.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: pollen tube; BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G07980.1). & (reliability: 428.0) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'niben101scf02752_216984-227282' '(at5g18590 : 808.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 4 (TAIR:AT3G05420.1); Has 9365 Blast hits to 4668 proteins in 321 species: Archae - 14; Bacteria - 334; Metazoa - 3669; Fungi - 969; Plants - 2222; Viruses - 6; Other Eukaryotes - 2151 (source: NCBI BLink). & (gnl|cdd|35600 : 198.0) no description available & (q39610|dyha_chlre : 87.4) Dynein alpha chain, flagellar outer arm (DHC alpha) - Chlamydomonas reinhardtii & (reliability: 1616.0) & (original description: Putative At5g18590, Description = Kelch repeat-containing protein, PFAM = PF01344;PF13418;PF13418)' T '35.1' 'not assigned.no ontology' 'niben101scf02752_1156138-1162689' '(at4g15630 : 116.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT4G15620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68120 : 98.5) no description available & (reliability: 232.0) & (original description: Putative IMP, Description = CASP-like protein, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf02752_1259119-1263100' '(at4g15610 : 122.0) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT3G06390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68120 : 101.0) no description available & (reliability: 244.0) & (original description: Putative IN26, Description = CASP-like protein, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf02757_415851-422029' '(at4g26020 : 168.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage. & (reliability: 336.0) & (original description: Putative At4g26020, Description = Protein At-4/1, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf02764_501106-540196' '(at5g05570 : 788.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: methyltransferase activity, nucleotide binding, nucleic acid binding; INVOLVED IN: vesicle-mediated transport, methylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), WD40 repeat, subgroup (InterPro:IPR019781), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G35560.2). & (gnl|cdd|37194 : 154.0) no description available & (reliability: 1576.0) & (original description: Putative BnaAnng01390D, Description = BnaAnng01390D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf02786_261624-277932' '(at1g73960 : 1420.0) TBP-associated factor 2 (TAF2); FUNCTIONS IN: metallopeptidase activity, zinc ion binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37143 : 711.0) no description available & (gnl|cdd|30656 : 102.0) no description available & (reliability: 2840.0) & (original description: Putative TAF2, Description = Transcription initiation factor TFIID subunit 2, PFAM = PF01433)' T '35.1' 'not assigned.no ontology' 'niben101scf02805_185621-199238' '(at1g20970 : 256.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: guard cell, cultured cell; BEST Arabidopsis thaliana protein match is: proton pump interactor 1 (TAIR:AT4G27500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 512.0) & (original description: Putative At1g20970, Description = BnaA06g14790D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf02805_733739-738263' '(at3g18260 : 184.0) Reticulon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT3G10260.2); Has 1034 Blast hits to 1032 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 545; Fungi - 2; Plants - 476; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37003 : 177.0) no description available & (gnl|cdd|66169 : 137.0) no description available & (reliability: 368.0) & (original description: Putative PGSC0003DMG400030573, Description = Reticulon-like protein, PFAM = PF02453)' T '35.1' 'not assigned.no ontology' 'niben101scf02806_79301-93314' '(at1g33290 : 453.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73170.1); Has 745 Blast hits to 453 proteins in 163 species: Archae - 0; Bacteria - 369; Metazoa - 12; Fungi - 0; Plants - 203; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (gnl|cdd|33644 : 237.0) no description available & (reliability: 906.0) & (original description: Putative ycf45, Description = Ycf45, PFAM = PF00004)' T '35.1' 'not assigned.no ontology' 'niben101scf02814_212495-216505' '(at4g26190 : 192.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; CONTAINS InterPro DOMAIN/s: NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G36540.1); Has 27570 Blast hits to 17450 proteins in 1040 species: Archae - 84; Bacteria - 2677; Metazoa - 10403; Fungi - 2363; Plants - 1406; Viruses - 96; Other Eukaryotes - 10541 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative At2g36540, Description = Haloacid dehalogenase-like hydrolase (HAD) superfamily protein, PFAM = PF03031)' T '35.1' 'not assigned.no ontology' 'niben101scf02816_174828-180606' '(at5g56750 : 593.0) N-MYC downregulated-like 1 (NDL1); CONTAINS InterPro DOMAIN/s: Pollen specific protein SF21 (InterPro:IPR015511), Ndr (InterPro:IPR004142); BEST Arabidopsis thaliana protein match is: N-MYC downregulated-like 3 (TAIR:AT2G19620.1); Has 776 Blast hits to 775 proteins in 111 species: Archae - 2; Bacteria - 48; Metazoa - 563; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (o23969|sf21_helan : 492.0) Pollen-specific protein SF21 - Helianthus annuus (Common sunflower) & (gnl|cdd|38142 : 413.0) no description available & (gnl|cdd|66750 : 376.0) no description available & (reliability: 1186.0) & (original description: Putative NDL1, Description = AT5g56750/MIK19_22, PFAM = PF03096)' T '35.1' 'not assigned.no ontology' 'niben101scf02819_652135-655334' '(gnl|cdd|68623 : 332.0) no description available & (at2g18630 : 274.0) Protein of unknown function (DUF677); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, peroxisome, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT5G66675.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 544.0) & (original description: Putative At2g18630, Description = UPF0496 protein At2g18630, PFAM = PF05055)' T '35.1' 'not assigned.no ontology' 'niben101scf02825_161766-165615' '(at4g00905 : 267.0) NC domain-containing protein-related; CONTAINS InterPro DOMAIN/s: NC (InterPro:IPR007053); BEST Arabidopsis thaliana protein match is: NC domain-containing protein-related (TAIR:AT1G01225.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 530.0) & (original description: Putative BnaCnng08590D, Description = BnaCnng08590D protein, PFAM = PF04970)' T '35.1' 'not assigned.no ontology' 'niben101scf02827_605486-610401' '(at5g19290 : 492.0) alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G14980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36668 : 373.0) no description available & (gnl|cdd|32448 : 128.0) no description available & (reliability: 984.0) & (original description: Putative At5g19290, Description = Esterase/lipase/thioesterase family protein, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'niben101scf02828_296312-302841' '(at1g66680 : 429.0) unknown function; AR401; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 12 (InterPro:IPR013217); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G60910.1); Has 1054 Blast hits to 1053 proteins in 391 species: Archae - 16; Bacteria - 384; Metazoa - 157; Fungi - 144; Plants - 125; Viruses - 0; Other Eukaryotes - 228 (source: NCBI BLink). & (gnl|cdd|36485 : 236.0) no description available & (reliability: 858.0) & (original description: Putative METTL10, Description = Protein-lysine N-methyltransferase METTL10, PFAM = PF13847)' T '35.1' 'not assigned.no ontology' 'niben101scf02831_19344-29741' '(at3g14010 : 351.0) hydroxyproline-rich glycoprotein family protein, similar to Mrs16p (GI:2737884) (Saccharomyces cerevisiae); weak similarity to ataxin-2 related protein (GI:1679686) (Homo sapiens). Included in a family of CTC interacting domain proteins found to interact with PAB2.; CTC-interacting domain 4 (CID4); FUNCTIONS IN: protein binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LsmAD domain (InterPro:IPR009604), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 3 (TAIR:AT1G54170.1). & (gnl|cdd|37586 : 152.0) no description available & (gnl|cdd|34779 : 99.5) no description available & (reliability: 692.0) & (original description: Putative CID4, Description = Polyadenylate-binding protein-interacting protein 4, PFAM = PF06741;PF14438)' T '35.1' 'not assigned.no ontology' 'niben101scf02839_349737-364637' '(at5g53390 : 490.0) O-acyltransferase (WSD1-like) family protein; CONTAINS InterPro DOMAIN/s: O-acyltransferase, WSD1, C-terminal (InterPro:IPR009721), O-acyltransferase, WSD1, N-terminal (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT2G38995.2); Has 1220 Blast hits to 1207 proteins in 180 species: Archae - 4; Bacteria - 957; Metazoa - 16; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|70441 : 205.0) no description available & (reliability: 898.0) & (original description: Putative WSD1, Description = O-acyltransferase WSD1, PFAM = PF03007;PF06974)' T '35.1' 'not assigned.no ontology' 'niben101scf02853_259435-265235' '(at3g48420 : 442.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT4G39970.1); Has 12560 Blast hits to 12559 proteins in 2179 species: Archae - 78; Bacteria - 10284; Metazoa - 135; Fungi - 145; Plants - 385; Viruses - 3; Other Eukaryotes - 1530 (source: NCBI BLink). & (gnl|cdd|38125 : 151.0) no description available & (gnl|cdd|30982 : 125.0) no description available & (reliability: 884.0) & (original description: Putative cbbY, Description = Haloacid dehalogenase, PFAM = PF13419)' T '35.1' 'not assigned.no ontology' 'niben101scf02864_277101-293899' '(at4g36400 : 762.0) Encodes a (D)-2-hydroxyglutarate dehydrogenase.; FAD-linked oxidases family protein; FUNCTIONS IN: electron carrier activity, (R)-2-hydroxyglutarate dehydrogenase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), FAD-linked oxidase, C-terminal (InterPro:IPR004113), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094), FAD-binding, type 2, subdomain 1 (InterPro:IPR016167); BEST Arabidopsis thaliana protein match is: FAD-linked oxidases family protein (TAIR:AT5G06580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36446 : 715.0) no description available & (gnl|cdd|30625 : 324.0) no description available & (reliability: 1524.0) & (original description: Putative D2HGDH, Description = D-2-hydroxyglutarate dehydrogenase, mitochondrial, PFAM = PF01565;PF02913)' T '35.1' 'not assigned.no ontology' 'niben101scf02892_299774-317843' '(at1g33980 : 246.0) Involved in mRNA surveillance, detects exported mRNAs with truncated open reading frames and initiates nonsense-mediated mRNA decay (NMD); UPF3; FUNCTIONS IN: nucleotide binding; INVOLVED IN: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Regulator of nonsense-mediated decay, UPF3 (InterPro:IPR005120); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67104 : 154.0) no description available & (gnl|cdd|36509 : 91.7) no description available & (reliability: 492.0) & (original description: Putative UPF3, Description = Regulator of nonsense transcripts UPF3, PFAM = PF03467)' T '35.1' 'not assigned.no ontology' 'niben101scf02893_175007-186371' '(at3g23940 : 850.0) dehydratase family; CONTAINS InterPro DOMAIN/s: Dihydroxy-acid dehydratase (InterPro:IPR004404), Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site (InterPro:IPR020558), Dihydroxy-acid/6-phosphogluconate dehydratase (InterPro:IPR000581). & (gnl|cdd|37659 : 846.0) no description available & (gnl|cdd|80774 : 705.0) no description available & (reliability: 1700.0) & (original description: Putative ilvD, Description = Dihydroxy-acid dehydratase, PFAM = PF00920;PF00920;PF00920)' T '35.1' 'not assigned.no ontology' 'niben101scf02908_495526-504323' '(at4g35140 : 589.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G38480.1); Has 10094 Blast hits to 7474 proteins in 477 species: Archae - 10; Bacteria - 1944; Metazoa - 3788; Fungi - 2083; Plants - 884; Viruses - 0; Other Eukaryotes - 1385 (source: NCBI BLink). & (gnl|cdd|36548 : 485.0) no description available & (gnl|cdd|29257 : 93.1) no description available & (reliability: 1178.0) & (original description: Putative pc326, Description = Nucleotide binding protein, PFAM = PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf02910_140438-142674' '(at1g76065 : 96.3) LYR family of Fe/S cluster biogenesis protein; CONTAINS InterPro DOMAIN/s: Complex 1 LYR protein (InterPro:IPR008011); Has 71 Blast hits to 71 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 35; Fungi - 10; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative , Description = , PFAM = PF05347)' T '35.1' 'not assigned.no ontology' 'niben101scf02915_181366-189266' '(at3g50845 : 211.0) Protein of unknown function (DUF59); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF59 (InterPro:IPR002744); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF59) (TAIR:AT1G68310.2); Has 567 Blast hits to 565 proteins in 213 species: Archae - 0; Bacteria - 0; Metazoa - 246; Fungi - 132; Plants - 85; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (gnl|cdd|38591 : 179.0) no description available & (gnl|cdd|34734 : 138.0) no description available & (reliability: 422.0) & (original description: Putative AEL1, Description = Protein AE7-like 1, PFAM = PF01883)' T '35.1' 'not assigned.no ontology' 'niben101scf02922_62708-65251' '(at5g61220 : 95.5) LYR family of Fe/S cluster biogenesis protein; CONTAINS InterPro DOMAIN/s: Complex 1 LYR protein (InterPro:IPR008011); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39005 : 91.2) no description available & (reliability: 191.0) & (original description: Putative , Description = Complex 1 protein, LYR family protein, PFAM = PF05347)' T '35.1' 'not assigned.no ontology' 'niben101scf02922_84726-100067' '(at5g61250 : 693.0) Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-β-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be secreted.; glucuronidase 1 (GUS1); FUNCTIONS IN: beta-glucuronidase activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 79, N-terminal (InterPro:IPR005199); BEST Arabidopsis thaliana protein match is: glucuronidase 2 (TAIR:AT5G07830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67288 : 396.0) no description available & (reliability: 1386.0) & (original description: Putative At5g61250, Description = Heparanase-like protein 2, PFAM = PF03662)' T '35.1' 'not assigned.no ontology' 'niben101scf02939_171011-176720' '(at2g05590 : 202.0) TLD-domain containing nucleolar protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TLDc (InterPro:IPR006571); BEST Arabidopsis thaliana protein match is: TLD-domain containing nucleolar protein (TAIR:AT4G39870.2); Has 907 Blast hits to 899 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 481; Fungi - 117; Plants - 118; Viruses - 0; Other Eukaryotes - 191 (source: NCBI BLink). & (gnl|cdd|37583 : 91.2) no description available & (reliability: 404.0) & (original description: Putative LOC100192992, Description = , PFAM = PF07534)' T '35.1' 'not assigned.no ontology' 'niben101scf02946_28919-31455' '(at1g62422 : 100.0) unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12020.1); Has 87 Blast hits to 86 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'niben101scf02949_1084736-1088052' '(at1g24530 : 393.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, heterotrimeric G-protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G24130.1); Has 47444 Blast hits to 22226 proteins in 799 species: Archae - 42; Bacteria - 6792; Metazoa - 17370; Fungi - 11016; Plants - 5872; Viruses - 0; Other Eukaryotes - 6352 (source: NCBI BLink). & (gnl|cdd|29257 : 112.0) no description available & (gnl|cdd|35540 : 87.3) no description available & (reliability: 786.0) & (original description: Putative BnaC05g21010D, Description = BnaC05g21010D protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf02952_207532-213582' '(at1g16880 : 360.0) uridylyltransferase-related; INVOLVED IN: response to cold; LOCATED IN: chloroplast thylakoid membrane, stromule, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: ACT domain-containing protein (TAIR:AT5G04740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 720.0) & (original description: Putative ACR11, Description = ACT domain-containing protein ACR11, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf02957_201036-210622' '(at3g14750 : 144.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67170.1); Has 4036 Blast hits to 3091 proteins in 519 species: Archae - 61; Bacteria - 669; Metazoa - 1503; Fungi - 255; Plants - 421; Viruses - 4; Other Eukaryotes - 1123 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative TCM_032144, Description = Gb:AAD10662.1, putative isoform 1, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf02969_3121-5567' '(at1g47278 : 107.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 37 Blast hits to 37 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative , Description = Histone-lysine N-methyltransferase ATX2, PFAM = PF16860)' T '35.1' 'not assigned.no ontology' 'niben101scf02972_562625-591811' '(gnl|cdd|35504 : 539.0) no description available & (at5g24320 : 508.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G53500.1); Has 26091 Blast hits to 16604 proteins in 671 species: Archae - 60; Bacteria - 5328; Metazoa - 9578; Fungi - 5238; Plants - 2794; Viruses - 3; Other Eukaryotes - 3090 (source: NCBI BLink). & (gnl|cdd|29257 : 123.0) no description available & (reliability: 1016.0) & (original description: Putative BnaC07g30110D, Description = BnaC07g30110D protein, PFAM = PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf02972_757165-760184' '(at4g10750 : 405.0) Phosphoenolpyruvate carboxylase family protein; FUNCTIONS IN: carbon-carbon lyase activity, catalytic activity; INVOLVED IN: in 7 processes; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), HpcH/HpaI aldolase (InterPro:IPR005000); BEST Arabidopsis thaliana protein match is: aldolase like (TAIR:AT4G24080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|33628 : 193.0) no description available & (reliability: 810.0) & (original description: Putative Sb02g030560, Description = Putative uncharacterized protein Sb02g030560, PFAM = PF03328)' T '35.1' 'not assigned.no ontology' 'niben101scf02974_88841-102330' '(at3g57000 : 311.0) nucleolar essential protein-related; CONTAINS InterPro DOMAIN/s: Ribosomal biogenesis, methyltransferase, EMG1/NEP1 (InterPro:IPR005304); Has 1079 Blast hits to 938 proteins in 280 species: Archae - 143; Bacteria - 12; Metazoa - 353; Fungi - 181; Plants - 69; Viruses - 2; Other Eukaryotes - 319 (source: NCBI BLink). & (gnl|cdd|38283 : 269.0) no description available & (gnl|cdd|86374 : 173.0) no description available & (reliability: 622.0) & (original description: Putative Emg1, Description = Ribosomal RNA small subunit methyltransferase NEP1, PFAM = PF03587)' T '35.1' 'not assigned.no ontology' 'niben101scf02974_93202-209213' '(at3g57000 : 187.0) nucleolar essential protein-related; CONTAINS InterPro DOMAIN/s: Ribosomal biogenesis, methyltransferase, EMG1/NEP1 (InterPro:IPR005304); Has 1079 Blast hits to 938 proteins in 280 species: Archae - 143; Bacteria - 12; Metazoa - 353; Fungi - 181; Plants - 69; Viruses - 2; Other Eukaryotes - 319 (source: NCBI BLink). & (gnl|cdd|38283 : 175.0) no description available & (gnl|cdd|86374 : 130.0) no description available & (reliability: 374.0) & (original description: Putative C2F, Description = Ribosomal RNA small subunit methyltransferase NEP1, PFAM = PF03587)' T '35.1' 'not assigned.no ontology' 'niben101scf02982_294853-302210' '(at4g13840 : 318.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G23840.1); Has 1220 Blast hits to 1220 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 1216; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66174 : 110.0) no description available & (reliability: 636.0) & (original description: Putative CER26, Description = Protein ECERIFERUM 26, PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'niben101scf02992_381779-393152' '(at2g22530 : 541.0) Alkaline-phosphatase-like family protein; FUNCTIONS IN: transferase activity, catalytic activity; INVOLVED IN: metabolic process, phospholipid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase (InterPro:IPR002591), Alkaline-phosphatase-like, core domain (InterPro:IPR017850); BEST Arabidopsis thaliana protein match is: Alkaline-phosphatase-like family protein (TAIR:AT5G17250.1); Has 1578 Blast hits to 1403 proteins in 374 species: Archae - 4; Bacteria - 326; Metazoa - 515; Fungi - 456; Plants - 91; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink). & (gnl|cdd|37336 : 373.0) no description available & (reliability: 1082.0) & (original description: Putative PIGG, Description = PIGG, PFAM = PF01663)' T '35.1' 'not assigned.no ontology' 'niben101scf02992_392047-403419' '(at2g22530 : 223.0) Alkaline-phosphatase-like family protein; FUNCTIONS IN: transferase activity, catalytic activity; INVOLVED IN: metabolic process, phospholipid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase (InterPro:IPR002591), Alkaline-phosphatase-like, core domain (InterPro:IPR017850); BEST Arabidopsis thaliana protein match is: Alkaline-phosphatase-like family protein (TAIR:AT5G17250.1); Has 1578 Blast hits to 1403 proteins in 374 species: Archae - 4; Bacteria - 326; Metazoa - 515; Fungi - 456; Plants - 91; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink). & (gnl|cdd|37336 : 110.0) no description available & (reliability: 446.0) & (original description: Putative At2g22530, Description = GPI ethanolamine phosphate transferase 2, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf02994_235048-240873' '(at1g23000 : 117.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT3G06130.1); Has 2286 Blast hits to 2008 proteins in 133 species: Archae - 0; Bacteria - 60; Metazoa - 111; Fungi - 41; Plants - 1285; Viruses - 0; Other Eukaryotes - 789 (source: NCBI BLink). & (gnl|cdd|36816 : 85.4) no description available & (reliability: 234.0) & (original description: Putative umc1319, Description = Chloroplast-targeted copper chaperone, putative, PFAM = PF00403)' T '35.1' 'not assigned.no ontology' 'niben101scf03009_138775-142687' '(at4g37470 : 454.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G03990.1); Has 8593 Blast hits to 8591 proteins in 1653 species: Archae - 86; Bacteria - 6869; Metazoa - 120; Fungi - 103; Plants - 302; Viruses - 19; Other Eukaryotes - 1094 (source: NCBI BLink). & (gnl|cdd|30941 : 91.7) no description available & (reliability: 908.0) & (original description: Putative D14, Description = Strigolactone esterase D14, PFAM = PF00561)' T '35.1' 'not assigned.no ontology' 'niben101scf03019_316535-322451' '(at3g45770 : 560.0) Polyketide synthase, enoylreductase family protein; FUNCTIONS IN: copper ion binding, zinc ion binding, ATP binding; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: ARP protein (REF) (TAIR:AT1G49670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35248 : 447.0) no description available & (gnl|cdd|30949 : 195.0) no description available & (reliability: 1120.0) & (original description: Putative mecr, Description = Trans-2-enoyl-CoA reductase, mitochondrial, PFAM = PF00107;PF08240)' T '35.1' 'not assigned.no ontology' 'niben101scf03027_118939-126264' '(at1g13820 : 454.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G39220.1); Has 7432 Blast hits to 7419 proteins in 1219 species: Archae - 99; Bacteria - 5035; Metazoa - 262; Fungi - 72; Plants - 574; Viruses - 0; Other Eukaryotes - 1390 (source: NCBI BLink). & (gnl|cdd|36667 : 180.0) no description available & (gnl|cdd|30941 : 94.0) no description available & (reliability: 908.0) & (original description: Putative At1g13820, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf03035_21340-25340' '(at2g20590 : 249.0) Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, chloroplast; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT4G28430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative RTNLB17, Description = Reticulon-like protein B17, PFAM = PF02453)' T '35.1' 'not assigned.no ontology' 'niben101scf03036_24131-392260' '(gnl|cdd|36954 : 94.9) no description available & (at1g05785 : 91.7) Got1/Sft2-like vescicle transport protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Got1/SFT2-like (InterPro:IPR007305); BEST Arabidopsis thaliana protein match is: Got1/Sft2-like vescicle transport protein family (TAIR:AT5G01430.2); Has 450 Blast hits to 450 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 165; Fungi - 111; Plants - 97; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative GOT1A, Description = Got1-domain-containing protein, PFAM = PF04178)' T '35.1' 'not assigned.no ontology' 'niben101scf03036_293071-314974' '(at2g43235 : 271.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 41 Blast hits to 41 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 542.0) & (original description: Putative At2g43235, Description = Putative uncharacterized protein At2g43240, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf03036_374041-379350' '(at2g42510 : 87.4) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Survival motor neuron interacting protein 1 (InterPro:IPR007022); BEST Arabidopsis thaliana protein match is: spliceosome protein-related (TAIR:AT1G54380.1); Has 229 Blast hits to 211 proteins in 63 species: Archae - 4; Bacteria - 35; Metazoa - 50; Fungi - 9; Plants - 20; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative PGSC0003DMG400021611, Description = Gem-associated 2, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf03045_1184505-1187383' '(at3g26510 : 152.0) Octicosapeptide/Phox/Bem1p family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: octicosapeptide/Phox/Bem1p (PB1) domain-containing protein (TAIR:AT1G70640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative At2g35050, Description = Phox/Bem1p, PFAM = PF00564)' T '35.1' 'not assigned.no ontology' 'niben101scf03046_439907-452819' '(at2g37730 : 528.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT3G11420.1); Has 511 Blast hits to 500 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 144; Plants - 279; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|68226 : 312.0) no description available & (gnl|cdd|37457 : 235.0) no description available & (reliability: 1056.0) & (original description: Putative BnaA10g29930D, Description = BnaA10g29930D protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben101scf03046_486175-490507' '(at2g37730 : 550.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT3G11420.1); Has 511 Blast hits to 500 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 144; Plants - 279; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|68226 : 287.0) no description available & (gnl|cdd|37457 : 238.0) no description available & (reliability: 1100.0) & (original description: Putative Os10g0534700, Description = Fringe protein, putative, expressed, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben101scf03065_14052-19798' '(at1g31600 : 245.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G02485.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39378 : 100.0) no description available & (reliability: 490.0) & (original description: Putative PGSC0003DMG400029377, Description = RNA-binding (RRM/RBD/RNP motifs) family protein, PFAM = PF13532;PF00076)' T '35.1' 'not assigned.no ontology' 'niben101scf03072_536722-541354' '(at2g18540 : 362.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT4G36700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84597 : 99.2) no description available & (gnl|cdd|36247 : 96.3) no description available & (p25974|glcb_soybn : 89.7) Beta-conglycinin, beta chain precursor - Glycine max (Soybean) & (reliability: 724.0) & (original description: Putative ftsY, Description = Vicilin-like antimicrobial peptides 2-2, PFAM = PF00190;PF00190)' T '35.1' 'not assigned.no ontology' 'niben101scf03102_40667-58245' '(at5g58000 : 276.0) Reticulon family protein; LOCATED IN: endoplasmic reticulum, chloroplast; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT2G20590.1); Has 1128 Blast hits to 1113 proteins in 146 species: Archae - 0; Bacteria - 2; Metazoa - 759; Fungi - 49; Plants - 88; Viruses - 4; Other Eukaryotes - 226 (source: NCBI BLink). & (reliability: 552.0) & (original description: Putative RTNLB21, Description = Reticulon-like protein B21, PFAM = PF02453)' T '35.1' 'not assigned.no ontology' 'niben101scf03115_72031-77309' '(at5g24320 : 523.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G53500.1); Has 26091 Blast hits to 16604 proteins in 671 species: Archae - 60; Bacteria - 5328; Metazoa - 9578; Fungi - 5238; Plants - 2794; Viruses - 3; Other Eukaryotes - 3090 (source: NCBI BLink). & (gnl|cdd|35504 : 502.0) no description available & (gnl|cdd|29257 : 111.0) no description available & (reliability: 1046.0) & (original description: Putative At5g24320, Description = Transducin/WD40 domain-containing protein, PFAM = PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf03116_132870-141581' '(at5g15550 : 615.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus, CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), NLE (InterPro:IPR012972), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related (TAIR:AT2G41500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35534 : 455.0) no description available & (gnl|cdd|29257 : 149.0) no description available & (reliability: 1230.0) & (original description: Putative PGSC0003DMG400001452, Description = Ribosome biogenesis protein WDR12 homolog, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF08154)' T '35.1' 'not assigned.no ontology' 'niben101scf03129_193485-196900' '(at4g16380 : 102.0) Heavy metal transport/detoxification superfamily protein ; BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G51090.1); Has 3773 Blast hits to 3325 proteins in 370 species: Archae - 4; Bacteria - 381; Metazoa - 1697; Fungi - 490; Plants - 712; Viruses - 65; Other Eukaryotes - 424 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative aap, Description = Accumulation-associated protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf03152_11081-23311' '(at5g24710 : 1707.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 53337 Blast hits to 28879 proteins in 1972 species: Archae - 196; Bacteria - 12524; Metazoa - 15998; Fungi - 8175; Plants - 2336; Viruses - 1195; Other Eukaryotes - 12913 (source: NCBI BLink). & (reliability: 3414.0) & (original description: Putative At5g24710, Description = WD40 domain-containing protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf03164_364641-373738' '(at3g06880 : 178.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: binding, nucleotide binding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781). & (gnl|cdd|29257 : 84.7) no description available & (q64ha9|spl11_orysa : 80.1) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 356.0) & (original description: Putative PGSC0003DMG400005092, Description = Os01g0229700 protein, PFAM = PF04564;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf03171_292012-297827' '(at5g26610 : 273.0) D111/G-patch domain-containing protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), D111/G-patch (InterPro:IPR000467), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: suppressor of abi3-5 (TAIR:AT3G54230.1). & (reliability: 546.0) & (original description: Putative BnaA10g28330D, Description = BnaA10g28330D protein, PFAM = PF01585;PF12171)' T '35.1' 'not assigned.no ontology' 'niben101scf03203_602456-622726' '(at2g44920 : 244.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentapeptide repeat (InterPro:IPR001646); BEST Arabidopsis thaliana protein match is: Pentapeptide repeat-containing protein (TAIR:AT1G12250.1); Has 15593 Blast hits to 6460 proteins in 916 species: Archae - 263; Bacteria - 11679; Metazoa - 260; Fungi - 2; Plants - 261; Viruses - 44; Other Eukaryotes - 3084 (source: NCBI BLink). & (reliability: 488.0) & (original description: Putative HB26, Description = Pentapeptide repeat protein, PFAM = PF00805;PF00805)' T '35.1' 'not assigned.no ontology' 'niben101scf03203_635133-643061' '(at2g37730 : 526.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT3G11420.1); Has 511 Blast hits to 500 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 144; Plants - 279; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|68226 : 351.0) no description available & (gnl|cdd|37457 : 237.0) no description available & (reliability: 1052.0) & (original description: Putative GT31C5, Description = Glycosyltransferase-like protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben101scf03208_246156-253040' '(at3g24160 : 229.0) Encodes a putative Type 1 membrane protein (PMP).; putative type 1 membrane protein (PMP); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative PMP, Description = AT3g24160/MUJ8_16, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf03213_242773-247352' '(at1g17070 : 801.0) GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tuftelin interacting protein N-terminal (InterPro:IPR022159), D111/G-patch (InterPro:IPR000467); BEST Arabidopsis thaliana protein match is: GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain (TAIR:AT2G42330.2); Has 1264 Blast hits to 1232 proteins in 250 species: Archae - 2; Bacteria - 6; Metazoa - 735; Fungi - 146; Plants - 190; Viruses - 1; Other Eukaryotes - 184 (source: NCBI BLink). & (gnl|cdd|37395 : 585.0) no description available & (gnl|cdd|72121 : 283.0) no description available & (reliability: 1602.0) & (original description: Putative STIPL1, Description = Septin and tuftelin-interacting protein 1 homolog 1, PFAM = PF12457;PF01585;PF07842)' T '35.1' 'not assigned.no ontology' 'niben101scf03221_8861-15203' '(at5g19750 : 253.0) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: peroxisomal membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT2G14860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37155 : 142.0) no description available & (reliability: 506.0) & (original description: Putative MPV17, Description = Protein sym-1, PFAM = PF04117)' T '35.1' 'not assigned.no ontology' 'niben101scf03227_381106-395589' '(at1g14620 : 310.0) DECOY (DECOY); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L46 (InterPro:IPR021757); Has 231 Blast hits to 231 proteins in 117 species: Archae - 0; Bacteria - 2; Metazoa - 68; Fungi - 103; Plants - 44; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|39748 : 168.0) no description available & (gnl|cdd|72898 : 82.6) no description available & (reliability: 620.0) & (original description: Putative DECOY, Description = At1g14620/T5E21_15, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf03236_348029-350655' '(at3g54200 : 141.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT3G05975.1); Has 631 Blast hits to 630 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 631; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative PGSC0003DMG400020863, Description = Late embryogenesis abundant protein, LEA-14, PFAM = PF03168)' T '35.1' 'not assigned.no ontology' 'niben101scf03238_24679-27698' '(at5g56750 : 279.0) N-MYC downregulated-like 1 (NDL1); CONTAINS InterPro DOMAIN/s: Pollen specific protein SF21 (InterPro:IPR015511), Ndr (InterPro:IPR004142); BEST Arabidopsis thaliana protein match is: N-MYC downregulated-like 3 (TAIR:AT2G19620.1); Has 776 Blast hits to 775 proteins in 111 species: Archae - 2; Bacteria - 48; Metazoa - 563; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (o23969|sf21_helan : 232.0) Pollen-specific protein SF21 - Helianthus annuus (Common sunflower) & (gnl|cdd|38142 : 156.0) no description available & (gnl|cdd|66750 : 135.0) no description available & (reliability: 558.0) & (original description: Putative NDL1, Description = Pollen-specific protein SF21, PFAM = PF03096)' T '35.1' 'not assigned.no ontology' 'niben101scf03253_301373-317896' '(at3g24090 : 1130.0) glutamine-fructose-6-phosphate transaminase (isomerizing)s;sugar binding;transaminases; FUNCTIONS IN: sugar binding, transaminase activity, glutamine-fructose-6-phosphate transaminase (isomerizing) activity; INVOLVED IN: carbohydrate biosynthetic process, carbohydrate metabolic process, metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Sugar isomerase (SIS) (InterPro:IPR001347), Glucosamine-fructose-6-phosphate aminotransferase, isomerising (InterPro:IPR005855), Glutamine amidotransferase, type II (InterPro:IPR017932); Has 19000 Blast hits to 18984 proteins in 2800 species: Archae - 500; Bacteria - 10467; Metazoa - 411; Fungi - 223; Plants - 106; Viruses - 14; Other Eukaryotes - 7279 (source: NCBI BLink). & (gnl|cdd|36482 : 928.0) no description available & (gnl|cdd|30798 : 630.0) no description available & (reliability: 2260.0) & (original description: Putative GFPT2, Description = Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2, PFAM = PF01380;PF01380;PF13522)' T '35.1' 'not assigned.no ontology' 'niben101scf03254_141748-222856' '(at3g04490 : 1315.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38092.1); Has 75 Blast hits to 64 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 36; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|39741 : 388.0) no description available & (reliability: 2630.0) & (original description: Putative Sb01g019330, Description = Putative uncharacterized protein Sb01g019330, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf03254_296562-328389' '(at1g67230 : 454.0) Encodes a nuclear coiled-coil protein related to the carrot peripheral nuclear protein NMCP1 that is involved in the determination of plant nuclear structure.; LITTLE NUCLEI1 (LINC1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: nucleus organization; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nuclear matrix constituent protein-related (TAIR:AT1G13220.2); Has 314297 Blast hits to 138342 proteins in 3965 species: Archae - 3454; Bacteria - 70538; Metazoa - 123746; Fungi - 25476; Plants - 17143; Viruses - 1173; Other Eukaryotes - 72767 (source: NCBI BLink). & (gnl|cdd|35383 : 92.2) no description available & (reliability: 908.0) & (original description: Putative BnaA07g26250D, Description = BnaA07g26250D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf03254_1185130-1197360' '(at5g14530 : 525.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G66240.1); Has 22372 Blast hits to 13576 proteins in 557 species: Archae - 62; Bacteria - 5277; Metazoa - 7900; Fungi - 4335; Plants - 2143; Viruses - 0; Other Eukaryotes - 2655 (source: NCBI BLink). & (gnl|cdd|36659 : 375.0) no description available & (gnl|cdd|29257 : 115.0) no description available & (reliability: 1050.0) & (original description: Putative WDR82, Description = WD repeat-containing protein 82, PFAM = PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf03278_407231-413793' '(at1g65030 : 382.0) This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase; Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: protein binding, nucleotide binding; LOCATED IN: nucleolus, CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); Has 5965 Blast hits to 4406 proteins in 385 species: Archae - 22; Bacteria - 1754; Metazoa - 1570; Fungi - 1477; Plants - 405; Viruses - 0; Other Eukaryotes - 737 (source: NCBI BLink). & (gnl|cdd|35515 : 313.0) no description available & (gnl|cdd|29257 : 94.7) no description available & (reliability: 764.0) & (original description: Putative BnaA02g13180D, Description = BnaA02g13180D protein, PFAM = PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf03282_300011-307967' '(at1g27760 : 211.0) Encodes a protein with similarity to human interferon-related developmental regulator (IFRD)that is involved in salt tolerance. Loss of function mutations are hypersensitive to salt stress and have reduced fertility. SAT32 is found in the cytoplasm but appears to translocate to the nucleus when plants are subject to salt stress.; SALT-TOLERANCE 32 (SAT32); FUNCTIONS IN: binding; INVOLVED IN: response to salt stress; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Interferon-related developmental regulator, N-terminal (InterPro:IPR007701), Interferon-related developmental regulator, C-terminal (InterPro:IPR006921), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68573 : 109.0) no description available & (reliability: 422.0) & (original description: Putative , Description = , PFAM = PF05004)' T '35.1' 'not assigned.no ontology' 'niben101scf03282_325413-339693' '(at5g11240 : 565.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Small-subunit processome, Utp12 (InterPro:IPR007148), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 8385 Blast hits to 5100 proteins in 391 species: Archae - 41; Bacteria - 3255; Metazoa - 1724; Fungi - 1723; Plants - 553; Viruses - 0; Other Eukaryotes - 1089 (source: NCBI BLink). & (gnl|cdd|39747 : 292.0) no description available & (gnl|cdd|29257 : 92.0) no description available & (reliability: 1130.0) & (original description: Putative BnaA02g00910D, Description = BnaA02g00910D protein, PFAM = PF00400;PF00400;PF04003)' T '35.1' 'not assigned.no ontology' 'niben101scf03289_275951-278523' '(at5g22870 : 151.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G08160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70773 : 126.0) no description available & (reliability: 302.0) & (original description: Putative At5g22870, Description = Gb}, PFAM = PF03168)' T '35.1' 'not assigned.no ontology' 'niben101scf03313_77147-100170' '(at1g60670 : 177.0) Protein of unknown function (DUF3755); INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3755 (InterPro:IPR022228); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3755) (TAIR:AT1G10820.2); Has 165 Blast hits to 165 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative DRIF1, Description = At1g10820, PFAM = PF12579)' T '35.1' 'not assigned.no ontology' 'niben101scf03320_519611-527151' '(at5g06370 : 413.0) NC domain-containing protein-related; CONTAINS InterPro DOMAIN/s: NC (InterPro:IPR007053); BEST Arabidopsis thaliana protein match is: NC domain-containing protein-related (TAIR:AT3G02700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 826.0) & (original description: Putative At5g06370, Description = AT5g06370/MHF15_11, PFAM = PF04970)' T '35.1' 'not assigned.no ontology' 'niben101scf03337_314877-324361' '(at4g00170 : 251.0) Plant VAMP (vesicle-associated membrane protein) family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: vesicle associated protein (TAIR:AT3G60600.1); Has 1100 Blast hits to 1071 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 430; Fungi - 141; Plants - 437; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (gnl|cdd|35660 : 123.0) no description available & (gnl|cdd|84916 : 105.0) no description available & (reliability: 502.0) & (original description: Putative PVA13, Description = Vesicle-associated protein 1-3, PFAM = PF00635)' T '35.1' 'not assigned.no ontology' 'niben101scf03350_481086-485604' '(at5g12040 : 272.0) Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein; FUNCTIONS IN: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, zinc ion binding; INVOLVED IN: nitrogen compound metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010); BEST Arabidopsis thaliana protein match is: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein (TAIR:AT4G08790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36024 : 186.0) no description available & (gnl|cdd|30737 : 144.0) no description available & (reliability: 544.0) & (original description: Putative nit, Description = Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein, PFAM = PF00795)' T '35.1' 'not assigned.no ontology' 'niben101scf03357_161538-183618' '(at5g09390 : 212.0) CD2-binding protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: suppressor of abi3-5 (TAIR:AT3G54230.2); Has 985 Blast hits to 963 proteins in 202 species: Archae - 8; Bacteria - 24; Metazoa - 477; Fungi - 147; Plants - 129; Viruses - 0; Other Eukaryotes - 200 (source: NCBI BLink). & (gnl|cdd|38161 : 99.7) no description available & (reliability: 424.0) & (original description: Putative POPTR_0003s01800g, Description = CD2-binding family protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf03363_57515-62653' '(at1g49405 : 102.0) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT3G50810.1); Has 205 Blast hits to 205 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative ARALYDRAFT_485429, Description = CASP-like protein ARALYDRAFT_485429, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf03373_120156-122783' '(at1g19260 : 201.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative At1g19260, Description = TTF-type zinc finger protein with HAT dimerisation domain, PFAM = PF14291)' T '35.1' 'not assigned.no ontology' 'niben101scf03374_672311-680009' '(at1g12390 : 157.0) Cornichon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular signaling pathway; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Cornichon (InterPro:IPR003377); BEST Arabidopsis thaliana protein match is: Cornichon family protein (TAIR:AT1G12340.1); Has 617 Blast hits to 617 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 324; Fungi - 159; Plants - 93; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|37940 : 132.0) no description available & (gnl|cdd|66954 : 94.1) no description available & (reliability: 314.0) & (original description: Putative At1g12390, Description = Protein cornichon homolog 4, PFAM = PF03311)' T '35.1' 'not assigned.no ontology' 'niben101scf03374_1027482-1035234' '(at1g63300 : 501.0) Myosin heavy chain-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: Myosin heavy chain-related protein (TAIR:AT5G41140.1); Has 241668 Blast hits to 113961 proteins in 3668 species: Archae - 3215; Bacteria - 50568; Metazoa - 96634; Fungi - 19056; Plants - 12907; Viruses - 1139; Other Eukaryotes - 58149 (source: NCBI BLink). & (gnl|cdd|35383 : 102.0) no description available & (reliability: 1002.0) & (original description: Putative PGSC0003DMG400005777, Description = Myosin heavy chain-like protein, PFAM = PF10358)' T '35.1' 'not assigned.no ontology' 'niben101scf03376_427991-441311' '(at2g14520 : 517.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein with a domain of unknown function (DUF21) (TAIR:AT4G33700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37329 : 302.0) no description available & (gnl|cdd|31445 : 147.0) no description available & (reliability: 1034.0) & (original description: Putative CBSDUF3, Description = DUF21 domain-containing protein At2g14520, PFAM = PF01595)' T '35.1' 'not assigned.no ontology' 'niben101scf03392_674651-678012' '(gnl|cdd|66174 : 215.0) no description available & (at3g26040 : 191.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 2415 Blast hits to 2403 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 2353; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative DH29, Description = Spermidine hydroxycinnamoyl transferase, PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'niben101scf03396_663064-676093' '(at1g30910 : 180.0) Molybdenum cofactor sulfurase family protein; FUNCTIONS IN: molybdenum ion binding, Mo-molybdopterin cofactor sulfurase activity, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), MOSC, N-terminal beta barrel (InterPro:IPR005303), Molybdenum cofactor sulfurase, C-terminal (InterPro:IPR005302); BEST Arabidopsis thaliana protein match is: Molybdenum cofactor sulfurase family protein (TAIR:AT5G44720.1); Has 1932 Blast hits to 1913 proteins in 692 species: Archae - 10; Bacteria - 1072; Metazoa - 332; Fungi - 283; Plants - 100; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (gnl|cdd|37573 : 148.0) no description available & (gnl|cdd|33030 : 89.2) no description available & (reliability: 360.0) & (original description: Putative MCSU1, Description = Mo-molybdopterin cofactor sulfurase, PFAM = PF03473)' T '35.1' 'not assigned.no ontology' 'niben101scf03396_775440-789122' '(at5g19820 : 1664.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37382 : 1090.0) no description available & (reliability: 3328.0) & (original description: Putative emb2734, Description = Protein EMBRYO DEFECTIVE 2734, PFAM = PF02985;PF13646)' T '35.1' 'not assigned.no ontology' 'niben101scf03404_41644-49998' '(at1g61670 : 444.0) Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G10980.1); Has 653 Blast hits to 651 proteins in 175 species: Archae - 0; Bacteria - 2; Metazoa - 278; Fungi - 148; Plants - 158; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|37779 : 356.0) no description available & (gnl|cdd|87161 : 246.0) no description available & (reliability: 888.0) & (original description: Putative At1g10980, Description = Lung seven transmembrane receptor family protein, PFAM = PF06814)' T '35.1' 'not assigned.no ontology' 'niben101scf03413_116854-129825' '(at1g30240 : 520.0) unknown protein; Has 169 Blast hits to 168 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 68; Plants - 46; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 1040.0) & (original description: Putative TCM_044175, Description = Uncharacterized protein isoform 2, PFAM = PF08167)' T '35.1' 'not assigned.no ontology' 'niben101scf03422_66237-74251' '(at3g16260 : 1036.0) Encodes a tRNase Z.; tRNAse Z4 (TRZ4); FUNCTIONS IN: 3'-tRNA processing endoribonuclease activity, catalytic activity; INVOLVED IN: tRNA 3'-end processing, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease Z (InterPro:IPR013471); BEST Arabidopsis thaliana protein match is: tRNAse Z3 (TAIR:AT1G52160.1); Has 6299 Blast hits to 4396 proteins in 1654 species: Archae - 442; Bacteria - 4351; Metazoa - 254; Fungi - 243; Plants - 108; Viruses - 0; Other Eukaryotes - 901 (source: NCBI BLink). & (gnl|cdd|37332 : 695.0) no description available & (gnl|cdd|31427 : 177.0) no description available & (reliability: 2072.0) & (original description: Putative TRZ4, Description = tRNAse Z4, PFAM = PF13691)' T '35.1' 'not assigned.no ontology' 'niben101scf03422_68082-74248' '(at3g16260 : 516.0) Encodes a tRNase Z.; tRNAse Z4 (TRZ4); FUNCTIONS IN: 3'-tRNA processing endoribonuclease activity, catalytic activity; INVOLVED IN: tRNA 3'-end processing, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease Z (InterPro:IPR013471); BEST Arabidopsis thaliana protein match is: tRNAse Z3 (TAIR:AT1G52160.1); Has 6299 Blast hits to 4396 proteins in 1654 species: Archae - 442; Bacteria - 4351; Metazoa - 254; Fungi - 243; Plants - 108; Viruses - 0; Other Eukaryotes - 901 (source: NCBI BLink). & (gnl|cdd|37332 : 327.0) no description available & (reliability: 1032.0) & (original description: Putative rnz, Description = Os01g0232300 protein, PFAM = PF13691)' T '35.1' 'not assigned.no ontology' 'niben101scf03427_66613-71681' '(at4g27460 : 247.0) Cystathionine beta-synthase (CBS) family protein; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein (TAIR:AT5G53750.1); Has 145 Blast hits to 145 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 494.0) & (original description: Putative CBSX5, Description = CBS domain-containing protein CBSX5, PFAM = PF00571)' T '35.1' 'not assigned.no ontology' 'niben101scf03436_16286-22728' '(at4g15050 : 218.0) Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G10190.1); Has 633 Blast hits to 604 proteins in 22 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 6; Plants - 620; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66735 : 173.0) no description available & (reliability: 414.0) & (original description: Putative , Description = , PFAM = PF14365;PF03080)' T '35.1' 'not assigned.no ontology' 'niben101scf03437_194050-202668' '(at1g16180 : 516.0) Serinc-domain containing serine and sphingolipid biosynthesis protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TMS membrane protein/tumour differentially expressed protein (InterPro:IPR005016); BEST Arabidopsis thaliana protein match is: Serinc-domain containing serine and sphingolipid biosynthesis protein (TAIR:AT3G06170.1). & (gnl|cdd|66988 : 428.0) no description available & (gnl|cdd|37803 : 427.0) no description available & (reliability: 1032.0) & (original description: Putative Sb01g016840, Description = Putative uncharacterized protein Sb01g016840, PFAM = PF03348)' T '35.1' 'not assigned.no ontology' 'niben101scf03437_194221-199188' '(gnl|cdd|37803 : 209.0) no description available & (gnl|cdd|66988 : 207.0) no description available & (at1g16180 : 198.0) Serinc-domain containing serine and sphingolipid biosynthesis protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TMS membrane protein/tumour differentially expressed protein (InterPro:IPR005016); BEST Arabidopsis thaliana protein match is: Serinc-domain containing serine and sphingolipid biosynthesis protein (TAIR:AT3G06170.1). & (reliability: 396.0) & (original description: Putative pco062914, Description = Putative serine incorporator, PFAM = PF03348)' T '35.1' 'not assigned.no ontology' 'niben101scf03444_424556-430213' '(at5g40670 : 353.0) PQ-loop repeat family protein / transmembrane family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cystinosin/ERS1p repeat (InterPro:IPR006603), Lysosomal cystine transporter (InterPro:IPR005282); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38355 : 280.0) no description available & (reliability: 706.0) & (original description: Putative ctns, Description = Cystinosin homolog, PFAM = PF04193;PF04193)' T '35.1' 'not assigned.no ontology' 'niben101scf03455_574998-591795' '(at2g34460 : 347.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G18890.1); Has 4817 Blast hits to 4761 proteins in 1319 species: Archae - 56; Bacteria - 3261; Metazoa - 151; Fungi - 101; Plants - 561; Viruses - 0; Other Eukaryotes - 687 (source: NCBI BLink). & (gnl|cdd|36417 : 175.0) no description available & (reliability: 694.0) & (original description: Putative At2g34460, Description = Uncharacterized protein At2g34460, chloroplastic, PFAM = PF13460)' T '35.1' 'not assigned.no ontology' 'niben101scf03456_42495-55431' '(at2g20320 : 872.0) DENN (AEX-3) domain-containing protein; CONTAINS InterPro DOMAIN/s: uDENN (InterPro:IPR005113), dDENN (InterPro:IPR005112), DENN (InterPro:IPR001194); BEST Arabidopsis thaliana protein match is: DENN (AEX-3) domain-containing protein (TAIR:AT5G35560.1); Has 1567 Blast hits to 1546 proteins in 147 species: Archae - 0; Bacteria - 2; Metazoa - 1072; Fungi - 78; Plants - 117; Viruses - 0; Other Eukaryotes - 298 (source: NCBI BLink). & (reliability: 1744.0) & (original description: Putative F383_03724, Description = DENN domain-containing 5B, PFAM = PF02141;PF03456)' T '35.1' 'not assigned.no ontology' 'niben101scf03460_609761-612372' '(at5g11090 : 108.0) serine-rich protein-related; BEST Arabidopsis thaliana protein match is: serine-rich protein-related (TAIR:AT5G25280.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative , Description = Dual specificity tyrosine-phosphorylation-regulated kinase-like, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf03479_515579-525838' '(at4g27860 : 119.0) vacuolar iron transporter (VIT) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: embryo, hypocotyl, root, pedicel, leaf; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217), Cytokine, IL-1-like (InterPro:IPR008996); BEST Arabidopsis thaliana protein match is: Vacuolar iron transporter (VIT) family protein (TAIR:AT4G27870.1). & (reliability: 238.0) & (original description: Putative BnaA01g16690D, Description = Vacuolar iron transporter-like protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf03488_755097-759527' '(at4g13600 : 141.0) Carbohydrate-binding X8 domain superfamily protein; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: plasmodesmata callose-binding protein 3 (TAIR:AT1G18650.1); Has 487 Blast hits to 485 proteins in 21 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 8; Plants - 474; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 115.0) no description available & (p52409|e13b_wheat : 88.2) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 282.0) & (original description: Putative Sb04g020230, Description = Putative uncharacterized protein Sb04g020230, PFAM = PF07983)' T '35.1' 'not assigned.no ontology' 'niben101scf03494_1289453-1295925' '(at3g57910 : 165.0) D111/G-patch domain-containing protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: D111/G-patch (InterPro:IPR000467); BEST Arabidopsis thaliana protein match is: D111/G-patch domain-containing protein (TAIR:AT5G26610.3); Has 4544 Blast hits to 3364 proteins in 343 species: Archae - 10; Bacteria - 136; Metazoa - 2001; Fungi - 471; Plants - 301; Viruses - 43; Other Eukaryotes - 1582 (source: NCBI BLink). & (gnl|cdd|37205 : 132.0) no description available & (reliability: 330.0) & (original description: Putative Sb07g027750, Description = Putative uncharacterized protein Sb07g027750, PFAM = PF01585;PF13821)' T '35.1' 'not assigned.no ontology' 'niben101scf03503_37785-40252' '(at1g76060 : 105.0) mutant has Embryo defect; EMBRYO DEFECTIVE 1793 (EMB1793); FUNCTIONS IN: catalytic activity; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Complex 1 LYR protein (InterPro:IPR008011); Has 47 Blast hits to 47 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative , Description = Complex 1 LYR protein, PFAM = PF05347)' T '35.1' 'not assigned.no ontology' 'niben101scf03507_536796-542366' '(at1g50660 : 312.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20350.1); Has 21445 Blast hits to 15134 proteins in 1325 species: Archae - 461; Bacteria - 2309; Metazoa - 11052; Fungi - 1737; Plants - 1035; Viruses - 42; Other Eukaryotes - 4809 (source: NCBI BLink). & (reliability: 624.0) & (original description: Putative KK1_006024, Description = Uncharacterized protein At5g41620 family, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf03535_112743-138659' '(at5g03430 : 731.0) phosphoadenosine phosphosulfate (PAPS) reductase family protein; FUNCTIONS IN: transferase activity; INVOLVED IN: Mo-molybdopterin cofactor biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Phosphoadenosine phosphosulphate reductase (InterPro:IPR002500), Molybdopterin binding (InterPro:IPR001453); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37855 : 149.0) no description available & (gnl|cdd|58166 : 135.0) no description available & (reliability: 1462.0) & (original description: Putative BnaCnng02810D, Description = BnaCnng02810D protein, PFAM = PF01507;PF00994)' T '35.1' 'not assigned.no ontology' 'niben101scf03541_163997-168036' '(at2g35760 : 209.0) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT4G16442.1); Has 688 Blast hits to 688 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 688; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68120 : 117.0) no description available & (reliability: 418.0) & (original description: Putative GSVIVT00013502001, Description = CASP-like protein 2B1, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf03548_245666-255084' '(at5g50970 : 493.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G19920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35486 : 229.0) no description available & (gnl|cdd|29257 : 96.2) no description available & (reliability: 986.0) & (original description: Putative PGSC0003DMG400014242, Description = Transducin/WD40 repeat protein, PFAM = PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf03548_269163-277786' '(at2g33550 : 177.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT4G31270.1); Has 743 Blast hits to 735 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 8; Plants - 568; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative ASR3, Description = Myb/SANT-like DNA-binding domain protein, PFAM = PF13837)' T '35.1' 'not assigned.no ontology' 'niben101scf03548_275073-277807' '(at2g33550 : 177.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT4G31270.1); Has 743 Blast hits to 735 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 8; Plants - 568; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative ASR3, Description = Myb/SANT-like DNA-binding domain protein, PFAM = PF13837)' T '35.1' 'not assigned.no ontology' 'niben101scf03550_177204-181753' '(at2g01190 : 241.0) Octicosapeptide/Phox/Bem1p family protein; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT3G18230.1); Has 5347 Blast hits to 4615 proteins in 344 species: Archae - 4; Bacteria - 100; Metazoa - 2308; Fungi - 1293; Plants - 931; Viruses - 29; Other Eukaryotes - 682 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative At2g01190, Description = Expressed protein, PFAM = PF00564)' T '35.1' 'not assigned.no ontology' 'niben101scf03570_143270-148405' '(at1g04340 : 142.0) HR-like lesion-inducing protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HR-like lesion-inducer (InterPro:IPR008637); BEST Arabidopsis thaliana protein match is: HR-like lesion-inducing protein-related (TAIR:AT5G43460.1); Has 168 Blast hits to 168 proteins in 33 species: Archae - 4; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|69058 : 133.0) no description available & (reliability: 284.0) & (original description: Putative dl3250c, Description = AT4g14420/dl3250c, PFAM = PF05514)' T '35.1' 'not assigned.no ontology' 'niben101scf03572_230028-235225' '(at5g13800 : 540.0) Encodes a pheophytinase that is involved in chlorophyll breakdown.; pheophytinase (PPH); FUNCTIONS IN: hydrolase activity, pheophytinase activity; INVOLVED IN: chlorophyll catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G36530.2); Has 3014 Blast hits to 3012 proteins in 698 species: Archae - 17; Bacteria - 1970; Metazoa - 110; Fungi - 4; Plants - 264; Viruses - 0; Other Eukaryotes - 649 (source: NCBI BLink). & (gnl|cdd|36667 : 167.0) no description available & (gnl|cdd|30941 : 99.4) no description available & (reliability: 1080.0) & (original description: Putative PPH, Description = Pheophytinase, chloroplastic, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf03572_496640-512374' '(at3g63460 : 1263.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G18830.1). & (gnl|cdd|35528 : 857.0) no description available & (gnl|cdd|29257 : 110.0) no description available & (reliability: 2526.0) & (original description: Putative SEC31B, Description = Protein transport protein SEC31 homolog B, PFAM = PF07304;PF12931)' T '35.1' 'not assigned.no ontology' 'niben101scf03574_6780-23084' '(at5g09390 : 228.0) CD2-binding protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: suppressor of abi3-5 (TAIR:AT3G54230.2); Has 985 Blast hits to 963 proteins in 202 species: Archae - 8; Bacteria - 24; Metazoa - 477; Fungi - 147; Plants - 129; Viruses - 0; Other Eukaryotes - 200 (source: NCBI BLink). & (gnl|cdd|38161 : 108.0) no description available & (reliability: 456.0) & (original description: Putative At5g09390, Description = AT5g09390/T5E8_190, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf03597_28285-34049' '(at4g26860 : 368.0) Predicted pyridoxal phosphate-dependent enzyme, YBL036C type; FUNCTIONS IN: pyridoxal phosphate binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Predicted pyridoxal phosphate-dependent enzyme, YBL036C type (InterPro:IPR011078), Alanine racemase, N-terminal (InterPro:IPR001608); BEST Arabidopsis thaliana protein match is: Predicted pyridoxal phosphate-dependent enzyme, YBL036C type (TAIR:AT1G11930.2). & (gnl|cdd|38367 : 333.0) no description available & (gnl|cdd|29733 : 264.0) no description available & (reliability: 736.0) & (original description: Putative PROSC, Description = Proline synthase co-transcribed bacterial homolog protein, PFAM = PF01168)' T '35.1' 'not assigned.no ontology' 'niben101scf03597_28324-31670' '(at4g26860 : 204.0) Predicted pyridoxal phosphate-dependent enzyme, YBL036C type; FUNCTIONS IN: pyridoxal phosphate binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Predicted pyridoxal phosphate-dependent enzyme, YBL036C type (InterPro:IPR011078), Alanine racemase, N-terminal (InterPro:IPR001608); BEST Arabidopsis thaliana protein match is: Predicted pyridoxal phosphate-dependent enzyme, YBL036C type (TAIR:AT1G11930.2). & (gnl|cdd|38367 : 188.0) no description available & (gnl|cdd|29733 : 159.0) no description available & (reliability: 408.0) & (original description: Putative yggS, Description = YggS family pyridoxal phosphate enzyme, PFAM = PF01168)' T '35.1' 'not assigned.no ontology' 'niben101scf03614_131904-150642' '(at2g28320 : 1070.0) Pleckstrin homology (PH) and lipid-binding START domains-containing protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769), Pleckstrin homology-type (InterPro:IPR011993), Lipid-binding START (InterPro:IPR002913), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Pleckstrin homology (PH) and lipid-binding START domains-containing protein (TAIR:AT3G54800.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70520 : 265.0) no description available & (reliability: 2140.0) & (original description: Putative At2g28320, Description = Pleckstrin homology (PH) and lipid-binding START domain-containing protein, PFAM = PF00169;PF01852;PF07059)' T '35.1' 'not assigned.no ontology' 'niben101scf03648_126138-130051' '(gnl|cdd|69288 : 268.0) no description available & (at3g05500 : 219.0) Rubber elongation factor protein (REF); INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rubber elongation factor (InterPro:IPR008802); BEST Arabidopsis thaliana protein match is: Rubber elongation factor protein (REF) (TAIR:AT2G47780.1); Has 129 Blast hits to 129 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q9fra7|y5940_orysa : 171.0) Putative REF/SRPP-like protein Os05g0151300 - Oryza sativa (Rice) & (reliability: 438.0) & (original description: Putative At3g05500, Description = REF/SRPP-like protein At3g05500, PFAM = PF05755)' T '35.1' 'not assigned.no ontology' 'niben101scf03652_158384-174083' '(at4g14500 : 558.0) Polyketide cyclase/dehydrase and lipid transport superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT3G23080.1); Has 214 Blast hits to 213 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 0; Plants - 165; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|37972 : 248.0) no description available & (gnl|cdd|29139 : 129.0) no description available & (reliability: 1116.0) & (original description: Putative dl3290w, Description = Putative uncharacterized protein AT4g14500, PFAM = PF01852)' T '35.1' 'not assigned.no ontology' 'niben101scf03652_158574-173528' '(at4g14500 : 271.0) Polyketide cyclase/dehydrase and lipid transport superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT3G23080.1); Has 214 Blast hits to 213 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 0; Plants - 165; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|37972 : 184.0) no description available & (gnl|cdd|29139 : 106.0) no description available & (reliability: 542.0) & (original description: Putative CP5, Description = Polyketide cyclase/dehydrase and lipid transport superfamily protein, PFAM = PF01852)' T '35.1' 'not assigned.no ontology' 'niben101scf03652_173470-176270' '(at2g03820 : 401.0) nonsense-mediated mRNA decay NMD3 family protein; CONTAINS InterPro DOMAIN/s: NMD3 (InterPro:IPR007064); Has 480 Blast hits to 466 proteins in 217 species: Archae - 17; Bacteria - 0; Metazoa - 145; Fungi - 138; Plants - 63; Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink). & (gnl|cdd|37824 : 366.0) no description available & (gnl|cdd|86761 : 132.0) no description available & (reliability: 802.0) & (original description: Putative nmd3, Description = Nonsense-mediated mRNA decay protein 3, PFAM = PF04981)' T '35.1' 'not assigned.no ontology' 'niben101scf03653_159371-173761' '(at5g19820 : 735.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37382 : 592.0) no description available & (reliability: 1470.0) & (original description: Putative PGSC0003DMG400029568, Description = Importin-5, PFAM = PF13646)' T '35.1' 'not assigned.no ontology' 'niben101scf03653_160597-170095' '(at5g19820 : 259.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37382 : 187.0) no description available & (reliability: 518.0) & (original description: Putative emb2734, Description = Importin-5, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf03653_161834-168711' '(at5g19820 : 119.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37382 : 95.7) no description available & (reliability: 238.0) & (original description: Putative emb2734, Description = Importin-5, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf03653_168712-170606' '(at5g19820 : 84.7) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative PGSC0003DMG400014623, Description = , PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf03676_453908-458310' '(gnl|cdd|87813 : 131.0) no description available & (at3g61113 : 130.0) Ubiquitin related modifier 1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ubiquitin related modifier 1 (InterPro:IPR015221), Ubiquitin-related modifier 1 (InterPro:IPR017188), Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp (InterPro:IPR016155); BEST Arabidopsis thaliana protein match is: Ubiquitin related modifier 1 (TAIR:AT2G45695.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39349 : 99.2) no description available & (reliability: 260.0) & (original description: Putative urm1, Description = Ubiquitin-related modifier 1 homolog, PFAM = PF09138)' T '35.1' 'not assigned.no ontology' 'niben101scf03683_89473-111166' '(at2g39805 : 305.0) Integral membrane Yip1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Yip1 domain (InterPro:IPR006977); BEST Arabidopsis thaliana protein match is: Integral membrane Yip1 family protein (TAIR:AT5G27490.1); Has 446 Blast hits to 445 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 176; Fungi - 103; Plants - 92; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|38324 : 120.0) no description available & (gnl|cdd|86741 : 86.8) no description available & (reliability: 610.0) & (original description: Putative pco079728, Description = Protein YIPF, PFAM = PF04893)' T '35.1' 'not assigned.no ontology' 'niben101scf03693_639975-645075' '(at1g45170 : 241.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42960.1); Has 60 Blast hits to 60 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative OEP24, Description = Outer envelope pore protein 24, chloroplastic, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf03694_427835-437018' '(at4g21220 : 345.0) Trimeric LpxA-like enzymes superfamily protein; FUNCTIONS IN: transferase activity; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: Trimeric LpxA-like enzymes superfamily protein (TAIR:AT4G05210.1); Has 11236 Blast hits to 11169 proteins in 1804 species: Archae - 57; Bacteria - 7331; Metazoa - 7; Fungi - 9; Plants - 63; Viruses - 0; Other Eukaryotes - 3769 (source: NCBI BLink). & (gnl|cdd|80772 : 258.0) no description available & (reliability: 690.0) & (original description: Putative LPXD2, Description = Probable UDP-3-O-acylglucosamine N-acyltransferase 2, mitochondrial, PFAM = PF00132;PF00132)' T '35.1' 'not assigned.no ontology' 'niben101scf03694_434593-437297' '(at4g05220 : 257.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G61760.1); Has 847 Blast hits to 847 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 847; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 126.0) no description available & (reliability: 514.0) & (original description: Putative At4g05220, Description = Late embryogenesis abundant hydroxyproline-rich glycoprotein, PFAM = PF03168)' T '35.1' 'not assigned.no ontology' 'niben101scf03702_139575-143209' '(at5g19900 : 250.0) PRLI-interacting factor, putative; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 500.0) & (original description: Putative At5g19900, Description = AT5G19900 protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf03714_459824-467256' '(q94de2|bd31a_orysa : 252.0) Protein BUD31 homolog 1 (Protein G10 homolog 1) - Oryza sativa (Rice) & (at4g21110 : 251.0) G10 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: G10 protein (InterPro:IPR001748), BUD31/G10-related, conserved site (InterPro:IPR018230); Has 466 Blast hits to 466 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 189; Fungi - 126; Plants - 80; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|64960 : 226.0) no description available & (gnl|cdd|38614 : 224.0) no description available & (reliability: 502.0) & (original description: Putative g10, Description = Cell cycle control protein cwf14, PFAM = PF01125)' T '35.1' 'not assigned.no ontology' 'niben101scf03723_20840-25619' '(at1g61900 : 392.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30700.1). & (reliability: 784.0) & (original description: Putative At1g61900, Description = Uncharacterized GPI-anchored protein At1g61900, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf03733_292142-304731' '(at4g26455 : 148.0) WPP domain interacting protein 1 (WIP1); FUNCTIONS IN: protein homodimerization activity, protein heterodimerization activity; LOCATED IN: nuclear envelope, cell plate; EXPRESSED IN: root; BEST Arabidopsis thaliana protein match is: WPP domain interacting protein 2 (TAIR:AT5G56210.1); Has 450 Blast hits to 403 proteins in 126 species: Archae - 15; Bacteria - 85; Metazoa - 55; Fungi - 14; Plants - 89; Viruses - 10; Other Eukaryotes - 182 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative PGSC0003DMG400008693, Description = Putative WPP domain-interacting protein 2-like, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf03736_98855-101475' '(at4g30845 : 105.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative PGSC0003DMG400011214, Description = BnaA03g51090D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf03737_711950-715184' '(at1g74190 : 115.0) receptor like protein 15 (RLP15); INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 13 (TAIR:AT1G74170.1); Has 128946 Blast hits to 31204 proteins in 1189 species: Archae - 49; Bacteria - 10411; Metazoa - 29723; Fungi - 1446; Plants - 77583; Viruses - 38; Other Eukaryotes - 9696 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative RLP15, Description = Leucine-rich receptor-like kinase family protein, putative, PFAM = PF00560)' T '35.1' 'not assigned.no ontology' 'niben101scf03747_516929-521984' '(at5g67540 : 621.0) Arabinanase/levansucrase/invertase; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 43 (InterPro:IPR006710); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family protein 43 (TAIR:AT3G49880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1242.0) & (original description: Putative BF3773, Description = Beta-glucanase, PFAM = PF04616)' T '35.1' 'not assigned.no ontology' 'niben101scf03748_38581-42806' '(at1g78230 : 372.0) Outer arm dynein light chain 1 protein; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Outer arm dynein light chain 1 protein (TAIR:AT4G03260.2); Has 24271 Blast hits to 14439 proteins in 747 species: Archae - 6; Bacteria - 9514; Metazoa - 8699; Fungi - 1002; Plants - 3127; Viruses - 44; Other Eukaryotes - 1879 (source: NCBI BLink). & (gnl|cdd|35751 : 88.8) no description available & (reliability: 744.0) & (original description: Putative At1g78230, Description = Outer arm dynein light chain 1 protein, PFAM = PF13855)' T '35.1' 'not assigned.no ontology' 'niben101scf03757_685094-691405' '(at3g11780 : 144.0) MD-2-related lipid recognition domain-containing protein / ML domain-containing protein; CONTAINS InterPro DOMAIN/s: MD-2-related lipid-recognition (InterPro:IPR003172), Protein of unknown function DUF907, fungi (InterPro:IPR010308); BEST Arabidopsis thaliana protein match is: Immunoglobulin E-set superfamily protein (TAIR:AT5G06480.1). & (gnl|cdd|39878 : 143.0) no description available & (gnl|cdd|29928 : 107.0) no description available & (reliability: 288.0) & (original description: Putative ml, Description = Putative ML domain protein, PFAM = PF02221)' T '35.1' 'not assigned.no ontology' 'niben101scf03772_224907-228517' '(at4g14490 : 119.0) SMAD/FHA domain-containing protein ; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: SMAD/FHA domain-containing protein (TAIR:AT3G02400.1); Has 1713 Blast hits to 1668 proteins in 445 species: Archae - 15; Bacteria - 1228; Metazoa - 80; Fungi - 66; Plants - 132; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative BnaA01g33000D, Description = FHA domain plant protein, PFAM = PF00498)' T '35.1' 'not assigned.no ontology' 'niben101scf03779_481275-486139' '(p59234|yipl_soltu : 245.0) Protein yippee-like - Solanum tuberosum (Potato) & (at2g40110 : 205.0) Yippee family putative zinc-binding protein; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: Yippee family putative zinc-binding protein (TAIR:AT3G08990.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38609 : 162.0) no description available & (gnl|cdd|66871 : 122.0) no description available & (reliability: 410.0) & (original description: Putative ypel, Description = Protein yippee-like, PFAM = PF03226)' T '35.1' 'not assigned.no ontology' 'niben101scf03804_132373-137975' '(gnl|cdd|72813 : 246.0) no description available & (at3g05270 : 229.0) Plant protein of unknown function (DUF869); EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G21810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative FPP, Description = Filament-like plant protein, PFAM = PF05911;PF05911;PF05911;PF05911)' T '35.1' 'not assigned.no ontology' 'niben101scf03810_205360-209396' '(at3g10260 : 314.0) Reticulon family protein; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT3G61560.1); Has 1060 Blast hits to 1060 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 591; Fungi - 0; Plants - 458; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37003 : 202.0) no description available & (gnl|cdd|66169 : 185.0) no description available & (reliability: 628.0) & (original description: Putative RTNLB8, Description = Reticulon-like protein B8, PFAM = PF02453)' T '35.1' 'not assigned.no ontology' 'niben101scf03817_523175-527535' '(at3g44190 : 466.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT5G22140.1); Has 14374 Blast hits to 14371 proteins in 2395 species: Archae - 444; Bacteria - 11667; Metazoa - 157; Fungi - 716; Plants - 246; Viruses - 0; Other Eukaryotes - 1144 (source: NCBI BLink). & (gnl|cdd|37706 : 225.0) no description available & (gnl|cdd|31444 : 166.0) no description available & (reliability: 932.0) & (original description: Putative At5g22140, Description = FAD/NAD(P)-binding oxidoreductase family protein, PFAM = PF07992)' T '35.1' 'not assigned.no ontology' 'niben101scf03817_752422-771286' '(at1g49880 : 232.0) Erv1/Alr family protein; FUNCTIONS IN: thiol oxidase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ERV/ALR sulphydryl oxidase (InterPro:IPR017905), Erv1/Alr (InterPro:IPR006863); Has 843 Blast hits to 843 proteins in 218 species: Archae - 0; Bacteria - 1; Metazoa - 134; Fungi - 258; Plants - 61; Viruses - 64; Other Eukaryotes - 325 (source: NCBI BLink). & (gnl|cdd|38565 : 161.0) no description available & (gnl|cdd|34659 : 120.0) no description available & (reliability: 464.0) & (original description: Putative ERV1, Description = FAD-linked sulfhydryl oxidase ERV1, PFAM = PF04777)' T '35.1' 'not assigned.no ontology' 'niben101scf03817_1254069-1262059' '(at3g44160 : 571.0) Outer membrane OMP85 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: outer membrane; CONTAINS InterPro DOMAIN/s: Bacterial surface antigen (D15) (InterPro:IPR000184); BEST Arabidopsis thaliana protein match is: Outer membrane OMP85 family protein (TAIR:AT3G48620.1); Has 794 Blast hits to 794 proteins in 257 species: Archae - 0; Bacteria - 513; Metazoa - 2; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|85243 : 84.7) no description available & (q43715|toc75_pea : 84.0) Protein TOC75, chloroplast precursor (75 kDa translocon at the outer-envelope-membrane of chloroplasts) (Import intermediate associated protein of 75 kDa) (75 kDa chloroplast outer envelope protein) - Pisum sativum (Garden pea) & (reliability: 1142.0) & (original description: Putative At3g44160, Description = At3g44160, PFAM = PF01103)' T '35.1' 'not assigned.no ontology' 'niben101scf03819_447927-468197' '(at4g26190 : 188.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; CONTAINS InterPro DOMAIN/s: NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G36540.1); Has 27570 Blast hits to 17450 proteins in 1040 species: Archae - 84; Bacteria - 2677; Metazoa - 10403; Fungi - 2363; Plants - 1406; Viruses - 96; Other Eukaryotes - 10541 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative L484_018752, Description = Uncharacterized FCP1-like domain-containing protein, PFAM = PF03031)' T '35.1' 'not assigned.no ontology' 'niben101scf03830_427589-432025' '(at1g58320 : 127.0) PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT1G68630.1); Has 648 Blast hits to 647 proteins in 80 species: Archae - 0; Bacteria - 0; Metazoa - 41; Fungi - 88; Plants - 508; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|86720 : 86.5) no description available & (reliability: 254.0) & (original description: Putative PCR9, Description = Protein PLANT CADMIUM RESISTANCE 9, PFAM = PF04749)' T '35.1' 'not assigned.no ontology' 'niben101scf03851_319492-327598' '(at5g16020 : 471.0) Encodes GEX3, a plasma membrane localized protein expressed in the male gametophyte. Required for micropylar pollen tube guidance. Also plays a role during early embryogenesis.; gamete-expressed 3 (GEX3); CONTAINS InterPro DOMAIN/s: Quinonprotein alcohol dehydrogenase-like (InterPro:IPR011047); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 942.0) & (original description: Putative GEX3, Description = Protein GAMETE EXPRESSED 3, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf03860_117418-123006' '(p59234|yipl_soltu : 182.0) Protein yippee-like - Solanum tuberosum (Potato) & (at3g11230 : 178.0) Yippee family putative zinc-binding protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: Yippee family putative zinc-binding protein (TAIR:AT2G40110.1); Has 983 Blast hits to 983 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 469; Fungi - 200; Plants - 237; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|38609 : 166.0) no description available & (gnl|cdd|66871 : 129.0) no description available & (reliability: 356.0) & (original description: Putative ypel1, Description = Protein yippee-like, PFAM = PF03226)' T '35.1' 'not assigned.no ontology' 'niben101scf03860_622808-634417' '(at3g54130 : 333.0) Josephin family protein; CONTAINS InterPro DOMAIN/s: Machado-Joseph disease protein MJD (InterPro:IPR006155); BEST Arabidopsis thaliana protein match is: JOSEPHIN-like protein (TAIR:AT2G29640.1); Has 590 Blast hits to 584 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 441; Fungi - 14; Plants - 76; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (q8lq36|atx3_orysa : 326.0) Putative ataxin-3 homolog (EC 3.4.22.-) - Oryza sativa (Rice) & (gnl|cdd|38146 : 269.0) no description available & (gnl|cdd|65850 : 134.0) no description available & (reliability: 666.0) & (original description: Putative At3g54130, Description = Ataxin-3 homolog, PFAM = PF02099)' T '35.1' 'not assigned.no ontology' 'niben101scf03867_301781-304493' '(at1g31200 : 84.7) phloem protein 2-A9 (PP2-A9); BEST Arabidopsis thaliana protein match is: phloem protein 2-A10 (TAIR:AT1G10155.1); Has 128 Blast hits to 128 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative , Description = , PFAM = PF14299)' T '35.1' 'not assigned.no ontology' 'niben101scf03870_1533-7959' '(at1g70280 : 457.0) NHL domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NHL repeat (InterPro:IPR001258), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT1G23880.1); Has 7202 Blast hits to 4120 proteins in 426 species: Archae - 63; Bacteria - 1459; Metazoa - 1476; Fungi - 468; Plants - 264; Viruses - 2; Other Eukaryotes - 3470 (source: NCBI BLink). & (reliability: 914.0) & (original description: Putative Os06g0269300, Description = NHL repeat-containing protein-like, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf03872_312910-325459' '(at3g45040 : 592.0) Encodes a putative dolichol kinase.; phosphatidate cytidylyltransferase family protein; FUNCTIONS IN: phosphatidate cytidylyltransferase activity, dolichol kinase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 410 Blast hits to 408 proteins in 217 species: Archae - 14; Bacteria - 44; Metazoa - 111; Fungi - 131; Plants - 43; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|37679 : 320.0) no description available & (reliability: 1184.0) & (original description: Putative EVN, Description = Dolichol kinase EVAN, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf03886_116475-120084' '(gnl|cdd|68120 : 102.0) no description available & (at4g25040 : 87.4) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT4G03540.1); Has 574 Blast hits to 574 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 574; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative POPTRDRAFT_823430, Description = CASP-like protein 1F2, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf03891_385050-388125' '(at5g56170 : 106.0) LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 (LLG1); BEST Arabidopsis thaliana protein match is: lorelei (TAIR:AT4G26466.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative In10, Description = BnaA10g10320D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf03893_197692-216915' '(at5g13020 : 333.0) Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), ENT (InterPro:IPR005491); BEST Arabidopsis thaliana protein match is: Emsy N Terminus (ENT) domain-containing protein (TAIR:AT2G44440.1); Has 417 Blast hits to 397 proteins in 49 species: Archae - 0; Bacteria - 2; Metazoa - 101; Fungi - 4; Plants - 307; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|39874 : 178.0) no description available & (gnl|cdd|67356 : 121.0) no description available & (reliability: 666.0) & (original description: Putative rif1, Description = Emsy N Terminus/ plant Tudor-like domains-containing protein isoform 1, PFAM = PF03735)' T '35.1' 'not assigned.no ontology' 'niben101scf03906_547766-555385' '(at1g15200 : 216.0) protein-protein interaction regulator family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pinin/SDK/memA protein (InterPro:IPR006786). & (gnl|cdd|38960 : 120.0) no description available & (reliability: 432.0) & (original description: Putative At1g15200, Description = Protein-protein interaction regulator family protein, PFAM = PF04696)' T '35.1' 'not assigned.no ontology' 'niben101scf03917_24976-33812' '(at1g22930 : 819.0) T-complex protein 11; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: T-complex 11 (InterPro:IPR008862); BEST Arabidopsis thaliana protein match is: T-complex protein 11 (TAIR:AT4G09150.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37192 : 248.0) no description available & (gnl|cdd|69326 : 220.0) no description available & (reliability: 1638.0) & (original description: Putative BnaA09g30260D, Description = BnaA09g30260D protein, PFAM = PF05794)' T '35.1' 'not assigned.no ontology' 'niben101scf03923_1039086-1064808' '(at1g03060 : 5021.0) Encodes a WD/BEACH domain protein involved in cell morphogenesis.; SPIRRIG (SPI); FUNCTIONS IN: binding; INVOLVED IN: signal transduction, multidimensional cell growth, vacuole organization, trichome morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Beige/BEACH (InterPro:IPR000409), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Beige/BEACH domain ;WD domain, G-beta repeat protein (TAIR:AT4G02660.1); Has 8491 Blast hits to 6383 proteins in 382 species: Archae - 4; Bacteria - 1376; Metazoa - 3669; Fungi - 1335; Plants - 868; Viruses - 0; Other Eukaryotes - 1239 (source: NCBI BLink). & (gnl|cdd|36999 : 3653.0) no description available & (gnl|cdd|85884 : 496.0) no description available & (reliability: 10042.0) & (original description: Putative SPI, Description = Protein SPIRRIG, PFAM = PF02138;PF00400;PF14844)' T '35.1' 'not assigned.no ontology' 'niben101scf03930_524176-533919' '(at1g15420 : 158.0) CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12 (InterPro:IPR007148); Has 764 Blast hits to 656 proteins in 193 species: Archae - 0; Bacteria - 42; Metazoa - 237; Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes - 223 (source: NCBI BLink). & (gnl|cdd|39747 : 112.0) no description available & (gnl|cdd|71597 : 92.9) no description available & (reliability: 316.0) & (original description: Putative Sb09g027390, Description = Putative uncharacterized protein Sb09g027390, PFAM = PF04003)' T '35.1' 'not assigned.no ontology' 'niben101scf03937_297424-307287' '(at1g25290 : 228.0) RHOMBOID-like protein 10 (RBL10); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 5 (TAIR:AT1G52580.1). & (gnl|cdd|37500 : 134.0) no description available & (gnl|cdd|85618 : 117.0) no description available & (reliability: 456.0) & (original description: Putative RBL10, Description = RHOMBOID-like protein 10, chloroplastic, PFAM = PF01694)' T '35.1' 'not assigned.no ontology' 'niben101scf03937_297480-306874' '(at1g25290 : 221.0) RHOMBOID-like protein 10 (RBL10); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 5 (TAIR:AT1G52580.1). & (gnl|cdd|37500 : 134.0) no description available & (gnl|cdd|85618 : 120.0) no description available & (reliability: 442.0) & (original description: Putative BnaC03g75710D, Description = Rhomboid-like protein, PFAM = PF01694)' T '35.1' 'not assigned.no ontology' 'niben101scf03948_213461-218468' '(at1g08800 : 144.0) Protein of unknown function, DUF593; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT2G30690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68159 : 128.0) no description available & (reliability: 288.0) & (original description: Putative MYOB1, Description = Zein-binding domain-containing protein, PFAM = PF04576)' T '35.1' 'not assigned.no ontology' 'niben101scf03952_237391-243741' '(at3g49210 : 496.0) O-acyltransferase (WSD1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: O-acyltransferase, WSD1, C-terminal (InterPro:IPR009721), O-acyltransferase, WSD1, N-terminal (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT3G49200.1); Has 1044 Blast hits to 1032 proteins in 166 species: Archae - 2; Bacteria - 797; Metazoa - 8; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|70441 : 219.0) no description available & (reliability: 968.0) & (original description: Putative FOP, Description = O-acyltransferase (WSD1-like) family protein, PFAM = PF06974;PF03007)' T '35.1' 'not assigned.no ontology' 'niben101scf03952_239501-243747' '(at3g49210 : 504.0) O-acyltransferase (WSD1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: O-acyltransferase, WSD1, C-terminal (InterPro:IPR009721), O-acyltransferase, WSD1, N-terminal (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT3G49200.1); Has 1044 Blast hits to 1032 proteins in 166 species: Archae - 2; Bacteria - 797; Metazoa - 8; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|70441 : 225.0) no description available & (reliability: 980.0) & (original description: Putative WSD1, Description = O-acyltransferase WSD1, PFAM = PF06974;PF03007)' T '35.1' 'not assigned.no ontology' 'niben101scf03953_319076-322173' '(at4g34320 : 384.0) Protein of unknown function (DUF677); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, sepal, flower, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT4G34330.1); Has 254 Blast hits to 251 proteins in 19 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 0; Plants - 246; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68623 : 350.0) no description available & (reliability: 768.0) & (original description: Putative At4g34320, Description = UPF0496 protein At4g34320, PFAM = PF05055)' T '35.1' 'not assigned.no ontology' 'niben101scf03953_786176-793051' '(at2g40190 : 644.0) Encodes a putative alpha-1,2-mannosyltransferase in N-linked glycoprotein (homologous to yeast ALG11). Plays vital roles in cell-wall biosynthesis and abiotic stress response. Located in endoplasmic reticulum membrane.; LEAF WILTING 3 (LEW3); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G78800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36601 : 465.0) no description available & (gnl|cdd|84842 : 89.6) no description available & (reliability: 1288.0) & (original description: Putative ALG11, Description = GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase, PFAM = PF15924;PF00534)' T '35.1' 'not assigned.no ontology' 'niben101scf03954_347043-352472' '(at5g07630 : 121.0) lipid transporters; FUNCTIONS IN: lipid transporter activity; INVOLVED IN: nuclear division, lipid transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RFT1 (InterPro:IPR007594); Has 367 Blast hits to 362 proteins in 190 species: Archae - 2; Bacteria - 15; Metazoa - 110; Fungi - 135; Plants - 51; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative glysoja_006125, Description = Protein RFT1 like, PFAM = PF04506)' T '35.1' 'not assigned.no ontology' 'niben101scf03964_153754-158281' '(at1g67170 : 136.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 5478 Blast hits to 4354 proteins in 533 species: Archae - 87; Bacteria - 653; Metazoa - 2554; Fungi - 380; Plants - 418; Viruses - 16; Other Eukaryotes - 1370 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative FLL4, Description = AtFLXL4, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf03964_421370-432255' '(at2g23820 : 270.0) Metal-dependent phosphohydrolase; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607); BEST Arabidopsis thaliana protein match is: Metal-dependent phosphohydrolase (TAIR:AT1G26160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38407 : 234.0) no description available & (gnl|cdd|32080 : 123.0) no description available & (reliability: 540.0) & (original description: Putative hddc2, Description = Hydrolase-HD superfamily protein, PFAM = PF13023)' T '35.1' 'not assigned.no ontology' 'niben101scf03964_435188-462630' '(at2g23890 : 826.0) HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase; FUNCTIONS IN: 5'-nucleotidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase (InterPro:IPR008380), Purine 5'-nucleotidase (InterPro:IPR016695); BEST Arabidopsis thaliana protein match is: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase (TAIR:AT1G75210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37681 : 603.0) no description available & (gnl|cdd|86943 : 403.0) no description available & (reliability: 1652.0) & (original description: Putative At2g23890, Description = At2g23890, PFAM = PF05761)' T '35.1' 'not assigned.no ontology' 'niben101scf03969_170755-173579' '(gnl|cdd|36205 : 104.0) no description available & (at5g28780 : 92.0) PIF1 helicase; CONTAINS InterPro DOMAIN/s: DNA helicase PIF1, ATP-dependent (InterPro:IPR010285); BEST Arabidopsis thaliana protein match is: PIF1 helicase (TAIR:AT3G51690.1); Has 1364 Blast hits to 1355 proteins in 303 species: Archae - 2; Bacteria - 367; Metazoa - 234; Fungi - 111; Plants - 389; Viruses - 9; Other Eukaryotes - 252 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative MTR_6g012610, Description = PIF1 helicase, PFAM = PF05970)' T '35.1' 'not assigned.no ontology' 'niben101scf03969_624377-629530' '(at5g45170 : 105.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT3G48420.1); Has 352 Blast hits to 346 proteins in 109 species: Archae - 0; Bacteria - 170; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative PGSC0003DMG400021145, Description = Haloacid dehalogenase-like hydrolase (HAD) superfamily protein, putative isoform 1, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf03985_333930-343029' '(at2g46380 : 296.0) Protein of unknown function (DUF3133); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3133 (InterPro:IPR021480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3133) (TAIR:AT3G61670.1); Has 300 Blast hits to 240 proteins in 20 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 592.0) & (original description: Putative PGSC0003DMG400012301, Description = Uncharacterized protein At5g05190 family, PFAM = PF11331)' T '35.1' 'not assigned.no ontology' 'niben101scf04003_985801-994389' '(at2g23360 : 362.0) Plant protein of unknown function (DUF869); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G19835.2); Has 38218 Blast hits to 24021 proteins in 1620 species: Archae - 547; Bacteria - 4231; Metazoa - 19834; Fungi - 3463; Plants - 2306; Viruses - 121; Other Eukaryotes - 7716 (source: NCBI BLink). & (gnl|cdd|72813 : 206.0) no description available & (reliability: 724.0) & (original description: Putative PGSC0003DMG400004007, Description = Filament-like plant protein 7, PFAM = PF05911)' T '35.1' 'not assigned.no ontology' 'niben101scf04007_85429-93461' '(at4g07390 : 341.0) Mannose-P-dolichol utilization defect 1 protein; CONTAINS InterPro DOMAIN/s: Cystinosin/ERS1p repeat (InterPro:IPR006603), Mannose-P-dolichol utilization defect 1 protein (InterPro:IPR016817); BEST Arabidopsis thaliana protein match is: Mannose-P-dolichol utilization defect 1 protein (TAIR:AT5G59470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38421 : 226.0) no description available & (reliability: 682.0) & (original description: Putative At4g07390, Description = Mannose-P-dolichol utilization defect 1 protein homolog 2, PFAM = PF04193;PF04193)' T '35.1' 'not assigned.no ontology' 'niben101scf04007_759726-768248' '(at1g45231 : 364.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: RNA capping, RNA methylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202), RNA cap guanine-N2 methyltransferase (InterPro:IPR019012); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G30550.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37941 : 242.0) no description available & (gnl|cdd|87990 : 233.0) no description available & (reliability: 728.0) & (original description: Putative TGS1, Description = Trimethylguanosine synthase, PFAM = PF09445)' T '35.1' 'not assigned.no ontology' 'niben101scf04015_192705-196506' '(at1g54780 : 352.0) Encodes a thylakoid lumen protein regulating photosystem II repair cycle.; TLP18.3; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II repair; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF477 (InterPro:IPR007621); Has 209 Blast hits to 209 proteins in 92 species: Archae - 0; Bacteria - 130; Metazoa - 2; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|68121 : 85.7) no description available & (reliability: 704.0) & (original description: Putative At1g54780, Description = UPF0603 protein At1g54780, chloroplastic, PFAM = PF04536)' T '35.1' 'not assigned.no ontology' 'niben101scf04039_248977-256998' '(at3g45740 : 279.0) hydrolase family protein / HAD-superfamily protein; FUNCTIONS IN: copper ion binding, zinc ion binding; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIA, CECR5 (InterPro:IPR006353), HAD-superfamily hydrolase, subfamily IIA (InterPro:IPR006357); Has 548 Blast hits to 526 proteins in 159 species: Archae - 8; Bacteria - 6; Metazoa - 128; Fungi - 307; Plants - 36; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|36831 : 218.0) no description available & (reliability: 558.0) & (original description: Putative At3g45740, Description = Hydrolase family protein / HAD-superfamily protein, PFAM = PF13344)' T '35.1' 'not assigned.no ontology' 'niben101scf04053_331994-339831' '(at2g14520 : 593.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein with a domain of unknown function (DUF21) (TAIR:AT4G33700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37329 : 379.0) no description available & (gnl|cdd|31445 : 180.0) no description available & (reliability: 1186.0) & (original description: Putative CBSDUF6, Description = DUF21 domain-containing protein At4g33700, PFAM = PF01595)' T '35.1' 'not assigned.no ontology' 'niben101scf04072_150779-154272' '(at5g03700 : 466.0) D-mannose binding lectin protein with Apple-like carbohydrate-binding domain; FUNCTIONS IN: sugar binding; INVOLVED IN: recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: stem, sperm cell, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-1 domain (InterPro:IPR003014), S-locus glycoprotein (InterPro:IPR000858); BEST Arabidopsis thaliana protein match is: S-domain-2 5 (TAIR:AT4G32300.1); Has 2091 Blast hits to 2063 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17801|kpro_maize : 87.4) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 932.0) & (original description: Putative At5g03700, Description = PAN domain-containing protein At5g03700, PFAM = PF00024;PF01453)' T '35.1' 'not assigned.no ontology' 'niben101scf04083_112345-115160' '(at4g27840 : 142.0) SNARE-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT5G52990.1); Has 279 Blast hits to 279 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 279; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative POPTR_0015s01460g, Description = Vesicle-associated membrane family protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf04083_200594-208677' '(at5g53050 : 473.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G02340.1); Has 11083 Blast hits to 11081 proteins in 1482 species: Archae - 92; Bacteria - 8297; Metazoa - 245; Fungi - 229; Plants - 334; Viruses - 5; Other Eukaryotes - 1881 (source: NCBI BLink). & (gnl|cdd|39380 : 165.0) no description available & (gnl|cdd|30941 : 113.0) no description available & (reliability: 946.0) & (original description: Putative asg3, Description = Putative hydrolase, PFAM = PF00561)' T '35.1' 'not assigned.no ontology' 'niben101scf04083_446491-450266' '(at5g53490 : 267.0) thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein.; Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid lumen; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentapeptide repeat (InterPro:IPR001646); BEST Arabidopsis thaliana protein match is: Pentapeptide repeat-containing protein (TAIR:AT1G12250.2). & (reliability: 534.0) & (original description: Putative TL17, Description = Thylakoid lumenal 17.4 kDa protein, chloroplastic, PFAM = PF13599)' T '35.1' 'not assigned.no ontology' 'niben101scf04099_554990-559703' '(at2g36330 : 174.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT5G62820.1); Has 241 Blast hits to 239 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 1; Plants - 232; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68120 : 102.0) no description available & (reliability: 348.0) & (original description: Putative PGSC0003DMG400027092, Description = CASP-like protein, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf04103_479420-488526' '(at5g19930 : 317.0) Protein of unknown function DUF92, transmembrane; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF92, transmembrane (InterPro:IPR002794). & (gnl|cdd|39691 : 300.0) no description available & (gnl|cdd|32021 : 116.0) no description available & (reliability: 634.0) & (original description: Putative At5g19930, Description = VTE6-related protein At5g19930, PFAM = PF01940)' T '35.1' 'not assigned.no ontology' 'niben101scf04103_1155524-1159065' '(at2g19870 : 484.0) tRNA/rRNA methyltransferase (SpoU) family protein; FUNCTIONS IN: methyltransferase activity, RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537), RNA methyltransferase TrmH, group 3 (InterPro:IPR004441), RNA 2-O ribose methyltransferase, substrate binding (InterPro:IPR013123); Has 11661 Blast hits to 11576 proteins in 2636 species: Archae - 7; Bacteria - 7686; Metazoa - 749; Fungi - 216; Plants - 206; Viruses - 3; Other Eukaryotes - 2794 (source: NCBI BLink). & (gnl|cdd|36056 : 220.0) no description available & (gnl|cdd|30912 : 170.0) no description available & (reliability: 968.0) & (original description: Putative PGSC0003DMG400038162, Description = rRNA methylase family protein, PFAM = PF08032;PF00588)' T '35.1' 'not assigned.no ontology' 'niben101scf04109_1103430-1106612' '(at3g18260 : 204.0) Reticulon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT3G10260.2); Has 1034 Blast hits to 1032 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 545; Fungi - 2; Plants - 476; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37003 : 198.0) no description available & (gnl|cdd|66169 : 141.0) no description available & (reliability: 408.0) & (original description: Putative RTNLB14, Description = Reticulon-like protein B14, PFAM = PF02453)' T '35.1' 'not assigned.no ontology' 'niben101scf04113_1213101-1246378' '(at5g42770 : 232.0) Maf-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Maf-like protein (InterPro:IPR003697); BEST Arabidopsis thaliana protein match is: Maf-like protein (TAIR:AT5G66550.1). & (gnl|cdd|36722 : 159.0) no description available & (gnl|cdd|29954 : 128.0) no description available & (reliability: 464.0) & (original description: Putative Maf3, Description = Maf-like protein, PFAM = PF02545)' T '35.1' 'not assigned.no ontology' 'niben101scf04120_269209-271744' '(at5g48370 : 185.0) Thioesterase/thiol ester dehydrase-isomerase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase/thiol ester dehydrase-isomerase superfamily protein (TAIR:AT2G30720.1); Has 2835 Blast hits to 2174 proteins in 781 species: Archae - 49; Bacteria - 1954; Metazoa - 460; Fungi - 99; Plants - 81; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (reliability: 370.0) & (original description: Putative At5g48370, Description = Acyl-CoA thioester hydrolase-like, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf04122_226958-230169' '(at4g05150 : 241.0) Octicosapeptide/Phox/Bem1p family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT2G01190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative At4g05150, Description = AT4g05150/C17L7_70, PFAM = PF00564)' T '35.1' 'not assigned.no ontology' 'niben101scf04126_31606-41425' '(at1g27430 : 578.0) GYF domain-containing protein; CONTAINS InterPro DOMAIN/s: GYF (InterPro:IPR003169); BEST Arabidopsis thaliana protein match is: GYF domain-containing protein (TAIR:AT1G24300.1); Has 16615 Blast hits to 9086 proteins in 533 species: Archae - 0; Bacteria - 846; Metazoa - 6412; Fungi - 1516; Plants - 946; Viruses - 78; Other Eukaryotes - 6817 (source: NCBI BLink). & (reliability: 1156.0) & (original description: Putative Sb02g002600, Description = Putative uncharacterized protein Sb02g002600, PFAM = PF02213)' T '35.1' 'not assigned.no ontology' 'niben101scf04133_45507-56160' '(at3g16230 : 278.0) Predicted eukaryotic LigT; FUNCTIONS IN: RNA binding, catalytic activity; INVOLVED IN: RNA metabolic process, regulation of transcription; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088), Predicted eukaryotic LigT (InterPro:IPR009210), RNA ligase/cyclic nucleotide phosphodiesterase (InterPro:IPR009097), Protein kinase A anchor protein, nuclear localisation signal domain (InterPro:IPR019510); BEST Arabidopsis thaliana protein match is: Predicted eukaryotic LigT (TAIR:AT3G16220.1). & (gnl|cdd|38025 : 173.0) no description available & (reliability: 556.0) & (original description: Putative AGO2, Description = AKAP7 2'5' RNA ligase-like domain protein, PFAM = PF10469)' T '35.1' 'not assigned.no ontology' 'niben101scf04133_245386-248433' '(at1g14160 : 171.0) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT5G15290.1); Has 565 Blast hits to 565 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 565; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68120 : 123.0) no description available & (reliability: 342.0) & (original description: Putative STG, Description = CASP-like protein, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf04134_106747-110456' '(at3g44510 : 395.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, root; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G08310.1). & (reliability: 716.0) & (original description: Putative At3g44510, Description = Alpha/beta-hydrolases family protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf04138_233959-239403' '(at3g10840 : 445.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G15490.1); Has 7044 Blast hits to 6961 proteins in 1208 species: Archae - 69; Bacteria - 5119; Metazoa - 311; Fungi - 102; Plants - 308; Viruses - 4; Other Eukaryotes - 1131 (source: NCBI BLink). & (gnl|cdd|36667 : 131.0) no description available & (gnl|cdd|30941 : 94.4) no description available & (reliability: 890.0) & (original description: Putative At3g10840, Description = Alpha/beta-hydrolase domain-containing protein, PFAM = PF00561)' T '35.1' 'not assigned.no ontology' 'niben101scf04156_98999-107898' '(at5g53050 : 488.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G02340.1); Has 11083 Blast hits to 11081 proteins in 1482 species: Archae - 92; Bacteria - 8297; Metazoa - 245; Fungi - 229; Plants - 334; Viruses - 5; Other Eukaryotes - 1881 (source: NCBI BLink). & (gnl|cdd|39380 : 172.0) no description available & (gnl|cdd|30941 : 114.0) no description available & (reliability: 976.0) & (original description: Putative asg3, Description = Hydrolase, alpha/beta fold family protein, PFAM = PF00561)' T '35.1' 'not assigned.no ontology' 'niben101scf04170_219747-224528' '(at1g01225 : 306.0) NC domain-containing protein-related; CONTAINS InterPro DOMAIN/s: NC (InterPro:IPR007053); BEST Arabidopsis thaliana protein match is: NC domain-containing protein-related (TAIR:AT4G00905.1); Has 173 Blast hits to 172 proteins in 34 species: Archae - 0; Bacteria - 24; Metazoa - 5; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 612.0) & (original description: Putative At5g06370, Description = Lecithin retinol acyltransferase, PFAM = PF04970)' T '35.1' 'not assigned.no ontology' 'niben101scf04173_317570-320241' '(at5g44170 : 323.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G08125.1); Has 872 Blast hits to 871 proteins in 146 species: Archae - 0; Bacteria - 8; Metazoa - 297; Fungi - 242; Plants - 228; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|38004 : 134.0) no description available & (reliability: 646.0) & (original description: Putative At5g44170, Description = At5g44170, PFAM = PF10294)' T '35.1' 'not assigned.no ontology' 'niben101scf04174_525379-533819' '(at1g31660 : 473.0) CONTAINS InterPro DOMAIN/s: Bystin (InterPro:IPR007955); Has 475 Blast hits to 467 proteins in 210 species: Archae - 0; Bacteria - 9; Metazoa - 155; Fungi - 139; Plants - 55; Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink). & (gnl|cdd|39075 : 467.0) no description available & (gnl|cdd|68848 : 407.0) no description available & (reliability: 946.0) & (original description: Putative BYSL, Description = Bystin, PFAM = PF05291)' T '35.1' 'not assigned.no ontology' 'niben101scf04175_51144-61739' '(at3g03610 : 449.0) ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT1G03620.1); Has 825 Blast hits to 825 proteins in 140 species: Archae - 0; Bacteria - 0; Metazoa - 481; Fungi - 44; Plants - 173; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|38208 : 237.0) no description available & (gnl|cdd|68305 : 212.0) no description available & (reliability: 898.0) & (original description: Putative OT_ostta03g05870, Description = Engulfment/cell motility, ELMO, PFAM = PF04727)' T '35.1' 'not assigned.no ontology' 'niben101scf04184_6975-24092' '(at2g43650 : 336.0) EMBRYO DEFECTIVE 2777 (EMB2777); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: gene silencing; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Sas10/Utp3/C1D (InterPro:IPR007146), Something about silencing protein 10 (Sas10), C-terminal (InterPro:IPR018972); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28230.2); Has 14657 Blast hits to 10395 proteins in 729 species: Archae - 127; Bacteria - 2247; Metazoa - 4743; Fungi - 2020; Plants - 661; Viruses - 159; Other Eukaryotes - 4700 (source: NCBI BLink). & (gnl|cdd|38328 : 99.8) no description available & (gnl|cdd|87913 : 94.9) no description available & (reliability: 672.0) & (original description: Putative EMB2777, Description = Protein EMBRYO DEFECTIVE 2777, PFAM = PF04000;PF09368)' T '35.1' 'not assigned.no ontology' 'niben101scf04185_411717-418718' '(at5g10910 : 411.0) mraW methylase family protein; FUNCTIONS IN: methyltransferase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosyl-L-methionine-dependent methyltransferase, MraW (InterPro:IPR002903); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37993 : 307.0) no description available & (gnl|cdd|80475 : 302.0) no description available & (reliability: 822.0) & (original description: Putative rsmH, Description = Ribosomal RNA small subunit methyltransferase H, PFAM = PF01795)' T '35.1' 'not assigned.no ontology' 'niben101scf04187_195015-201871' '(at1g13635 : 353.0) DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT5G57970.2). & (gnl|cdd|86301 : 223.0) no description available & (reliability: 706.0) & (original description: Putative tag, Description = DNA-3-methyladenine glycosylase I, PFAM = PF03352)' T '35.1' 'not assigned.no ontology' 'niben101scf04205_41372-49771' '(at1g04970 : 464.0) lipid-binding serum glycoprotein family protein; FUNCTIONS IN: lipid binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Bactericidal permeability-increasing protein, alpha/beta domain (InterPro:IPR017943), Lipid-binding serum glycoprotein, N-terminal (InterPro:IPR017942), Lipid-binding serum glycoprotein, C-terminal (InterPro:IPR001124); BEST Arabidopsis thaliana protein match is: lipid-binding serum glycoprotein family protein (TAIR:AT3G20270.2); Has 420 Blast hits to 417 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 344; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|39362 : 240.0) no description available & (gnl|cdd|29338 : 153.0) no description available & (reliability: 928.0) & (original description: Putative At1g04970, Description = Putative BPI/LBP family protein At1g04970, PFAM = PF02886;PF01273)' T '35.1' 'not assigned.no ontology' 'niben101scf04205_258767-265713' '(at5g47540 : 440.0) Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT4G17270.1); Has 570 Blast hits to 568 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 142; Plants - 154; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|36779 : 390.0) no description available & (gnl|cdd|87570 : 332.0) no description available & (reliability: 844.0) & (original description: Putative hymA, Description = Calcium-binding protein 39, PFAM = PF08569)' T '35.1' 'not assigned.no ontology' 'niben101scf04216_803983-808688' '(at1g71950 : 112.0) Proteinase inhibitor, propeptide; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: negative regulation of catalytic activity; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor, propeptide (InterPro:IPR009020), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8, subtilisin-related (InterPro:IPR015500); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G11940.1); Has 894 Blast hits to 886 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 894; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative BnaC02g20900D, Description = BnaC02g20900D protein, PFAM = PF05922)' T '35.1' 'not assigned.no ontology' 'niben101scf04233_129619-138524' '(at4g18060 : 390.0) SH3 domain-containing protein; CONTAINS InterPro DOMAIN/s: Neutrophil cytosol factor 2 p67phox (InterPro:IPR000108), Src homology-3 domain (InterPro:IPR001452); BEST Arabidopsis thaliana protein match is: SH3 domain-containing protein (TAIR:AT4G34660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 780.0) & (original description: Putative SH3P3, Description = SH3 domain-containing protein 3, PFAM = PF14604)' T '35.1' 'not assigned.no ontology' 'niben101scf04283_172495-180637' '(at1g03270 : 557.0) CBS domain-containing protein with a domain of unknown function (DUF21); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein with a domain of unknown function (DUF21) (TAIR:AT4G14240.1); Has 10325 Blast hits to 10105 proteins in 2459 species: Archae - 102; Bacteria - 7685; Metazoa - 330; Fungi - 275; Plants - 225; Viruses - 0; Other Eukaryotes - 1708 (source: NCBI BLink). & (gnl|cdd|37329 : 372.0) no description available & (gnl|cdd|31445 : 142.0) no description available & (reliability: 1042.0) & (original description: Putative CBSDUF4, Description = Putative DUF21 domain-containing protein At1g03270, PFAM = PF01595)' T '35.1' 'not assigned.no ontology' 'niben101scf04287_246706-249516' '(at1g23550 : 87.8) Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation.; similar to RCD one 2 (SRO2); FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: similar to RCD one 3 (TAIR:AT1G70440.1); Has 178 Blast hits to 169 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative PGSC0003DMG400013476, Description = PARP, PFAM = PF00644)' T '35.1' 'not assigned.no ontology' 'niben101scf04287_481006-484261' '(at1g10657 : 118.0) Plant protein 1589 of unknown function; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476); BEST Arabidopsis thaliana protein match is: Plant protein 1589 of unknown function (TAIR:AT3G55240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative At1g10657, Description = BnaA08g25610D protein, PFAM = PF09713)' T '35.1' 'not assigned.no ontology' 'niben101scf04289_211230-221932' '(at1g23890 : 244.0) NHL domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NHL repeat. subgroup (InterPro:IPR013017), NHL repeat (InterPro:IPR001258), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT1G23880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 488.0) & (original description: Putative BnaA09g54610D, Description = BnaA09g54610D protein, PFAM = PF01436)' T '35.1' 'not assigned.no ontology' 'niben101scf04289_211741-214479' '(at1g23890 : 100.0) NHL domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NHL repeat. subgroup (InterPro:IPR013017), NHL repeat (InterPro:IPR001258), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT1G23880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative At1g23890, Description = NHL domain-containing protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf04294_46799-53762' '(at4g35250 : 624.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G34460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36417 : 272.0) no description available & (gnl|cdd|31046 : 104.0) no description available & (reliability: 1248.0) & (original description: Putative ycf39, Description = Uncharacterized protein ycf39, PFAM = PF05368)' T '35.1' 'not assigned.no ontology' 'niben101scf04294_136588-153310' '(at5g60620 : 684.0) Glycerol-3-phosphate acyltransferase localized to the ER. Similar to mammalian cells involved in storage oil formation.; glycerol-3-phosphate acyltransferase 9 (GPAT9); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: triglyceride biosynthetic process, diacylglycerol biosynthetic process, metabolic process; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: Phospholipid/glycerol acyltransferase family protein (TAIR:AT1G80950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38109 : 232.0) no description available & (gnl|cdd|65360 : 91.5) no description available & (reliability: 1368.0) & (original description: Putative GPAT, Description = sn-glycerol-3-phosphate acyltransferase, PFAM = PF01553)' T '35.1' 'not assigned.no ontology' 'niben101scf04294_157714-162506' '(at2g17120 : 275.0) lysm domain GPI-anchored protein 2 precursor (LYM2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell wall macromolecule catabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Peptidoglycan-binding Lysin subgroup (InterPro:IPR002482); BEST Arabidopsis thaliana protein match is: lysm domain GPI-anchored protein 1 precursor (TAIR:AT1G21880.2); Has 636 Blast hits to 591 proteins in 145 species: Archae - 0; Bacteria - 285; Metazoa - 0; Fungi - 0; Plants - 336; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 550.0) & (original description: Putative CEBIP, Description = Chitin elicitor-binding protein, PFAM = PF01476;PF01476)' T '35.1' 'not assigned.no ontology' 'niben101scf04296_151082-153534' '(at5g14890 : 106.0) NHL domain-containing protein; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NHL repeat (InterPro:IPR001258), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT1G70280.2); Has 2211 Blast hits to 1172 proteins in 193 species: Archae - 21; Bacteria - 928; Metazoa - 143; Fungi - 0; Plants - 261; Viruses - 0; Other Eukaryotes - 858 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative , Description = NHL domain-containing protein, putative, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf04327_194245-199453' '(gnl|cdd|36844 : 234.0) no description available & (at2g16595 : 218.0) Translocon-associated protein (TRAP), alpha subunit; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translocon-associated protein (TRAP), alpha subunit (InterPro:IPR005595); BEST Arabidopsis thaliana protein match is: Translocon-associated protein (TRAP), alpha subunit (TAIR:AT2G21160.1); Has 245 Blast hits to 245 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 29; Plants - 60; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|67507 : 95.1) no description available & (reliability: 436.0) & (original description: Putative tap1, Description = Translocon-associated protein (TRAP), alpha subunit, PFAM = PF03896)' T '35.1' 'not assigned.no ontology' 'niben101scf04347_133319-135930' '(at4g23930 : 142.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT1G64450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative BnaA09g12240D, Description = BnaA09g12240D protein, PFAM = PF03168)' T '35.1' 'not assigned.no ontology' 'niben101scf04383_3228-8974' '(at3g18940 : 343.0) clast3-related; CONTAINS InterPro DOMAIN/s: Proteasome assembly chaperone 2, eukaryotic (InterPro:IPR016562), Proteasome assembly chaperone 2 (InterPro:IPR019151); Has 249 Blast hits to 248 proteins in 114 species: Archae - 1; Bacteria - 0; Metazoa - 124; Fungi - 51; Plants - 58; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|38322 : 285.0) no description available & (reliability: 686.0) & (original description: Putative At3g18940, Description = Proteasome assembly chaperone 2, PFAM = PF09754)' T '35.1' 'not assigned.no ontology' 'niben101scf04386_425672-470435' '(at3g20820 : 484.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction, defense response; LOCATED IN: apoplast, cell wall, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G12940.1); Has 70868 Blast hits to 23934 proteins in 998 species: Archae - 25; Bacteria - 4468; Metazoa - 12756; Fungi - 677; Plants - 48104; Viruses - 0; Other Eukaryotes - 4838 (source: NCBI BLink). & (p93194|rpk1_iponi : 127.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|35693 : 92.4) no description available & (reliability: 968.0) & (original description: Putative LRR1, Description = Leucine-rich repeat protein, PFAM = PF00560;PF00560;PF08263)' T '35.1' 'not assigned.no ontology' 'niben101scf04396_303935-314526' '(at3g05090 : 1063.0) Encodes a DCAF protein. Mutants are defective in lateral root development and suggest roles for DDB1≠Cul4ñmediated protein degradation in regulating auxin accumulation during lateral root primordium development and lateral root meristem emergence.; LATERAL ROOT STIMULATOR 1 (LRS1); FUNCTIONS IN: nucleotide binding; INVOLVED IN: lateral root formation; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Protein of unknown function DUF3337 (InterPro:IPR021772), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, alpha subunit (TAIR:AT1G62020.1); Has 59803 Blast hits to 26869 proteins in 729 species: Archae - 50; Bacteria - 7042; Metazoa - 23770; Fungi - 14096; Plants - 7202; Viruses - 3; Other Eukaryotes - 7640 (source: NCBI BLink). & (gnl|cdd|35529 : 697.0) no description available & (gnl|cdd|29257 : 161.0) no description available & (reliability: 2126.0) & (original description: Putative LRS1, Description = AT3g05090/T12H1_5, PFAM = PF00400;PF00400;PF00400;PF00400;PF11816)' T '35.1' 'not assigned.no ontology' 'niben101scf04400_106705-115559' '(at1g69340 : 832.0) appr-1-p processing enzyme family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Appr-1-p processing (InterPro:IPR002589); BEST Arabidopsis thaliana protein match is: appr-1-p processing enzyme family protein (TAIR:AT2G40600.1); Has 3597 Blast hits to 3538 proteins in 1210 species: Archae - 64; Bacteria - 1971; Metazoa - 984; Fungi - 140; Plants - 224; Viruses - 8; Other Eukaryotes - 206 (source: NCBI BLink). & (gnl|cdd|28845 : 234.0) no description available & (gnl|cdd|37844 : 210.0) no description available & (reliability: 1664.0) & (original description: Putative ymdB, Description = Macro domain protein, PFAM = PF01661;PF13716)' T '35.1' 'not assigned.no ontology' 'niben101scf04407_207120-211130' '(at5g62740 : 514.0) HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1 (HIR1); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT1G69840.7); Has 5648 Blast hits to 5647 proteins in 1784 species: Archae - 171; Bacteria - 3783; Metazoa - 267; Fungi - 306; Plants - 270; Viruses - 3; Other Eukaryotes - 848 (source: NCBI BLink). & (gnl|cdd|37831 : 390.0) no description available & (gnl|cdd|48219 : 371.0) no description available & (reliability: 1028.0) & (original description: Putative HIR1, Description = Hypersensitive-induced response protein 1, PFAM = PF01145)' T '35.1' 'not assigned.no ontology' 'niben101scf04410_1062117-1071483' '(at5g07980 : 193.0) dentin sialophosphoprotein-related; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07940.2); Has 1336 Blast hits to 783 proteins in 174 species: Archae - 4; Bacteria - 291; Metazoa - 248; Fungi - 128; Plants - 141; Viruses - 0; Other Eukaryotes - 524 (source: NCBI BLink). & (reliability: 386.0) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'niben101scf04418_1234877-1241815' '(at4g12790 : 403.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function, ATP binding (InterPro:IPR004130); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G22370.2); Has 1465 Blast hits to 1454 proteins in 282 species: Archae - 123; Bacteria - 0; Metazoa - 415; Fungi - 412; Plants - 158; Viruses - 0; Other Eukaryotes - 357 (source: NCBI BLink). & (gnl|cdd|36747 : 371.0) no description available & (gnl|cdd|86218 : 244.0) no description available & (reliability: 806.0) & (original description: Putative gpn3, Description = GPN-loop GTPase 3, PFAM = PF03029)' T '35.1' 'not assigned.no ontology' 'niben101scf04444_900648-906390' '(at3g13200 : 214.0) EMBRYO DEFECTIVE 2769 (EMB2769); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: spliceosomal complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cwf15/Cwc15 cell cycle control protein (InterPro:IPR006973); Has 4871 Blast hits to 3670 proteins in 321 species: Archae - 3; Bacteria - 193; Metazoa - 1657; Fungi - 645; Plants - 225; Viruses - 150; Other Eukaryotes - 1998 (source: NCBI BLink). & (gnl|cdd|68463 : 198.0) no description available & (gnl|cdd|38438 : 173.0) no description available & (reliability: 428.0) & (original description: Putative cwc15, Description = Pre-mRNA-splicing factor cwc15, PFAM = PF04889)' T '35.1' 'not assigned.no ontology' 'niben101scf04477_230576-233344' '(at5g54980 : 166.0) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT1G17200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative VIT_19s0090g00570, Description = CASP-like protein 2D1, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf04477_376169-379377' '(at5g42570 : 96.7) B-cell receptor-associated 31-like; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: B-cell receptor-associated protein 31-like (TAIR:AT1G11905.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37173 : 94.6) no description available & (reliability: 193.4) & (original description: Putative Sb10g020520, Description = Putative uncharacterized protein Sb10g020520, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf04496_87394-92574' '(at1g52870 : 450.0) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT4G03410.2); Has 1371 Blast hits to 1369 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 561; Fungi - 316; Plants - 329; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (gnl|cdd|37155 : 120.0) no description available & (reliability: 900.0) & (original description: Putative BnaA06g01790D, Description = BnaA06g01790D protein, PFAM = PF04117)' T '35.1' 'not assigned.no ontology' 'niben101scf04511_12614-18055' '(at1g30280 : 94.7) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: J-domain protein required for chloroplast accumulation response 1 (TAIR:AT1G75100.1); Has 2071 Blast hits to 1585 proteins in 232 species: Archae - 0; Bacteria - 49; Metazoa - 766; Fungi - 302; Plants - 290; Viruses - 69; Other Eukaryotes - 595 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative glysoja_030055, Description = Auxilin-related protein 2, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf04537_231413-237624' '(at5g41620 : 207.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: intracellular protein transport protein USO1-related (TAIR:AT1G64180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative SIP7, Description = Plasma membrane, putative, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf04549_982564-986110' '(at1g19260 : 497.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 994.0) & (original description: Putative Sb09g017260, Description = Putative uncharacterized protein Sb09g017260, PFAM = PF14291)' T '35.1' 'not assigned.no ontology' 'niben101scf04551_258560-266365' '(at5g47540 : 451.0) Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT4G17270.1); Has 570 Blast hits to 568 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 142; Plants - 154; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|36779 : 390.0) no description available & (gnl|cdd|87570 : 328.0) no description available & (reliability: 870.0) & (original description: Putative hymA, Description = Calcium-binding protein 39, PFAM = PF08569)' T '35.1' 'not assigned.no ontology' 'niben101scf04556_516209-524410' '(at2g44280 : 539.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G60070.1); Has 255 Blast hits to 249 proteins in 88 species: Archae - 0; Bacteria - 68; Metazoa - 102; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|40027 : 380.0) no description available & (gnl|cdd|32393 : 99.1) no description available & (reliability: 1076.0) & (original description: Putative BnaC04g22460D, Description = BnaC04g22460D protein, PFAM = PF13347)' T '35.1' 'not assigned.no ontology' 'niben101scf04558_63211-66023' '(at2g27080 : 213.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT5G21130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70773 : 127.0) no description available & (reliability: 426.0) & (original description: Putative PGSC0003DMG400008711, Description = LEA2-1, PFAM = PF03168)' T '35.1' 'not assigned.no ontology' 'niben101scf04558_190764-195891' '(at2g21530 : 142.0) SMAD/FHA domain-containing protein ; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); Has 459 Blast hits to 455 proteins in 163 species: Archae - 26; Bacteria - 275; Metazoa - 3; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative FHA14, Description = At2g21530, PFAM = PF00498)' T '35.1' 'not assigned.no ontology' 'niben101scf04558_279647-296749' '(at5g12290 : 644.0) Encodes a mitochondrial outer membrane protein, involved in galactoglycerolipid biosynthesis. The dgd1 mutant phenotype is suppressed in the dgs1 mutant background.; DGD1 SUPPRESSOR 1 (DGS1); INVOLVED IN: galactolipid biosynthetic process, hydrogen peroxide biosynthetic process; LOCATED IN: mitochondrial outer membrane, mitochondrion, protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear control of ATP synthase 2 (InterPro:IPR013946); Has 223 Blast hits to 223 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 125; Plants - 59; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (gnl|cdd|72062 : 194.0) no description available & (reliability: 1288.0) & (original description: Putative DGS1, Description = Protein DGS1, mitochondrial, PFAM = PF08637)' T '35.1' 'not assigned.no ontology' 'niben101scf04594_240715-256308' '(at4g15470 : 216.0) Bax inhibitor-1 family protein; CONTAINS InterPro DOMAIN/s: Inhibitor of apoptosis-promoting Bax1 related (InterPro:IPR006214); BEST Arabidopsis thaliana protein match is: Bax inhibitor-1 family protein (TAIR:AT1G03070.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37533 : 175.0) no description available & (gnl|cdd|31014 : 84.9) no description available & (reliability: 432.0) & (original description: Putative At4g15470, Description = BI1-like protein, PFAM = PF01027)' T '35.1' 'not assigned.no ontology' 'niben101scf04627_505626-509300' '(at5g67460 : 242.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G13560.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87420 : 139.0) no description available & (p52409|e13b_wheat : 100.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 484.0) & (original description: Putative At5g67460, Description = Gb}, PFAM = PF07983;PF00332)' T '35.1' 'not assigned.no ontology' 'niben101scf04643_237300-254849' '(at5g03430 : 736.0) phosphoadenosine phosphosulfate (PAPS) reductase family protein; FUNCTIONS IN: transferase activity; INVOLVED IN: Mo-molybdopterin cofactor biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Phosphoadenosine phosphosulphate reductase (InterPro:IPR002500), Molybdopterin binding (InterPro:IPR001453); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37855 : 151.0) no description available & (gnl|cdd|58166 : 134.0) no description available & (reliability: 1472.0) & (original description: Putative BnaCnng02810D, Description = BnaCnng02810D protein, PFAM = PF01507;PF00994)' T '35.1' 'not assigned.no ontology' 'niben101scf04653_977183-992126' '(at4g24710 : 637.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; EXPRESSED IN: shoot apex, embryo, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Chaperonin clpA/B (InterPro:IPR001270); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT3G53230.1); Has 23595 Blast hits to 21814 proteins in 2884 species: Archae - 1432; Bacteria - 8057; Metazoa - 4130; Fungi - 3211; Plants - 2291; Viruses - 16; Other Eukaryotes - 4458 (source: NCBI BLink). & (gnl|cdd|35963 : 472.0) no description available & (gnl|cdd|84432 : 115.0) no description available & (reliability: 1274.0) & (original description: Putative pch2, Description = Thyroid receptor-interacting protein 13, PFAM = PF00004)' T '35.1' 'not assigned.no ontology' 'niben101scf04663_252785-258462' '(at3g57000 : 309.0) nucleolar essential protein-related; CONTAINS InterPro DOMAIN/s: Ribosomal biogenesis, methyltransferase, EMG1/NEP1 (InterPro:IPR005304); Has 1079 Blast hits to 938 proteins in 280 species: Archae - 143; Bacteria - 12; Metazoa - 353; Fungi - 181; Plants - 69; Viruses - 2; Other Eukaryotes - 319 (source: NCBI BLink). & (gnl|cdd|38283 : 265.0) no description available & (gnl|cdd|86374 : 172.0) no description available & (reliability: 618.0) & (original description: Putative EMG1, Description = Ribosomal RNA small subunit methyltransferase NEP1, PFAM = PF03587)' T '35.1' 'not assigned.no ontology' 'niben101scf04706_245935-262031' '(at2g22530 : 873.0) Alkaline-phosphatase-like family protein; FUNCTIONS IN: transferase activity, catalytic activity; INVOLVED IN: metabolic process, phospholipid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase (InterPro:IPR002591), Alkaline-phosphatase-like, core domain (InterPro:IPR017850); BEST Arabidopsis thaliana protein match is: Alkaline-phosphatase-like family protein (TAIR:AT5G17250.1); Has 1578 Blast hits to 1403 proteins in 374 species: Archae - 4; Bacteria - 326; Metazoa - 515; Fungi - 456; Plants - 91; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink). & (gnl|cdd|37336 : 492.0) no description available & (reliability: 1746.0) & (original description: Putative PIGG, Description = PIGG, PFAM = PF01663)' T '35.1' 'not assigned.no ontology' 'niben101scf04714_86398-99177' '(at4g00170 : 239.0) Plant VAMP (vesicle-associated membrane protein) family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: vesicle associated protein (TAIR:AT3G60600.1); Has 1100 Blast hits to 1071 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 430; Fungi - 141; Plants - 437; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (gnl|cdd|35660 : 114.0) no description available & (gnl|cdd|84916 : 93.5) no description available & (reliability: 478.0) & (original description: Putative CDS5, Description = Vesicle-associated protein 1-2, PFAM = PF00635;PF00635)' T '35.1' 'not assigned.no ontology' 'niben101scf04716_8359-10631' '(at1g67350 : 136.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photorespiration; LOCATED IN: mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative , Description = Putative NADH-ubiquinone oxidoreductase 11 kDa subunit-like, PFAM = PF17250)' T '35.1' 'not assigned.no ontology' 'niben101scf04728_119599-123906' '(at4g17430 : 541.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); Has 42 Blast hits to 40 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 37; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 1082.0) & (original description: Putative At4g17430, Description = At4g17430, PFAM = PF10250)' T '35.1' 'not assigned.no ontology' 'niben101scf04739_11655-16238' '(at5g55950 : 546.0) Nucleotide/sugar transporter family protein; INVOLVED IN: N-terminal protein myristoylation, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: inflorescence meristem, petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide/sugar transporter family protein (TAIR:AT5G57100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36654 : 215.0) no description available & (reliability: 1092.0) & (original description: Putative At5g55950, Description = Gb}, PFAM = PF03151)' T '35.1' 'not assigned.no ontology' 'niben101scf04741_2405-6300' '(at3g14750 : 227.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67170.1); Has 4036 Blast hits to 3091 proteins in 519 species: Archae - 61; Bacteria - 669; Metazoa - 1503; Fungi - 255; Plants - 421; Viruses - 4; Other Eukaryotes - 1123 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative FLXL1, Description = Protein FLX-like 1, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf04742_148251-156407' '(at5g19485 : 583.0) transferases;nucleotidyltransferases; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Trimeric LpxA-like enzyme (TAIR:AT2G34970.1); Has 6119 Blast hits to 5902 proteins in 1501 species: Archae - 491; Bacteria - 3115; Metazoa - 435; Fungi - 482; Plants - 325; Viruses - 0; Other Eukaryotes - 1271 (source: NCBI BLink). & (gnl|cdd|36675 : 254.0) no description available & (gnl|cdd|31401 : 143.0) no description available & (reliability: 1166.0) & (original description: Putative Os06g0338900, Description = Os06g0338900 protein, PFAM = PF00132;PF00132;PF00483)' T '35.1' 'not assigned.no ontology' 'niben101scf04761_28673-32365' '(at5g09430 : 435.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G39955.1); Has 8280 Blast hits to 8277 proteins in 1491 species: Archae - 97; Bacteria - 6100; Metazoa - 351; Fungi - 79; Plants - 382; Viruses - 0; Other Eukaryotes - 1271 (source: NCBI BLink). & (gnl|cdd|36667 : 191.0) no description available & (gnl|cdd|30941 : 112.0) no description available & (reliability: 870.0) & (original description: Putative BnaA10g22540D, Description = BnaA10g22540D protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf04776_54128-57033' '(at3g63060 : 276.0) EID1-like 3 (EDL3); BEST Arabidopsis thaliana protein match is: EID1-like 1 (TAIR:AT5G15440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36784 : 135.0) no description available & (reliability: 552.0) & (original description: Putative EDL3, Description = Circadian clock coupling factor ZGT, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf04783_282218-291015' '(at4g14240 : 581.0) CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein with a domain of unknown function (DUF21) (TAIR:AT4G14230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37329 : 376.0) no description available & (gnl|cdd|31445 : 138.0) no description available & (reliability: 1096.0) & (original description: Putative CBSDUF1, Description = DUF21 domain-containing protein At4g14240, PFAM = PF01595)' T '35.1' 'not assigned.no ontology' 'niben101scf04786_55476-65738' '(at4g32272 : 452.0) Nucleotide/sugar transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: UDP-N-acetylglucosamine (UAA) transporter family (TAIR:AT4G31600.1). & (gnl|cdd|36657 : 183.0) no description available & (reliability: 904.0) & (original description: Putative At4g32272, Description = Nucleotide/sugar transporter family protein, PFAM = PF03151)' T '35.1' 'not assigned.no ontology' 'niben101scf04786_227450-233566' '(at4g32190 : 358.0) Myosin heavy chain-related protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35383 : 93.0) no description available & (reliability: 716.0) & (original description: Putative At4g32190, Description = Myosin heavy chain-related protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf04793_153636-157696' '(at3g12050 : 457.0) Aha1 domain-containing protein; FUNCTIONS IN: ATPase activator activity, chaperone binding; INVOLVED IN: response to stress; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Activator of Hsp90 ATPase, N-terminal (InterPro:IPR015310), Activator of Hsp90 ATPase homologue 1-like (InterPro:IPR013538); Has 501 Blast hits to 499 proteins in 203 species: Archae - 0; Bacteria - 24; Metazoa - 214; Fungi - 142; Plants - 65; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|38147 : 250.0) no description available & (gnl|cdd|87842 : 114.0) no description available & (reliability: 914.0) & (original description: Putative Os08g0464000, Description = Os08g0464000 protein, PFAM = PF09229;PF08327)' T '35.1' 'not assigned.no ontology' 'niben101scf04796_151849-155090' '(at4g16380 : 101.0) Heavy metal transport/detoxification superfamily protein ; BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G51090.1); Has 3773 Blast hits to 3325 proteins in 370 species: Archae - 4; Bacteria - 381; Metazoa - 1697; Fungi - 490; Plants - 712; Viruses - 65; Other Eukaryotes - 424 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative BnaCnng77490D, Description = BnaCnng77490D protein, PFAM = PF00403)' T '35.1' 'not assigned.no ontology' 'niben101scf04797_72748-84755' '(at2g32590 : 582.0) LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits to 447 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other Eukaryotes - 108 (source: NCBI BLink). & (gnl|cdd|86950 : 426.0) no description available & (gnl|cdd|37539 : 406.0) no description available & (reliability: 1164.0) & (original description: Putative CAPH, Description = Condensin complex subunit 2, PFAM = PF05786;PF05786)' T '35.1' 'not assigned.no ontology' 'niben101scf04797_126816-131357' '(at2g04690 : 245.0) Pyridoxamine 5'-phosphate oxidase family protein; FUNCTIONS IN: FMN binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellular repressor of E1A-stimulated genes (CREG) (InterPro:IPR014631), FMN-binding split barrel (InterPro:IPR012349), FMN-binding split barrel, related (InterPro:IPR009002); Has 408 Blast hits to 408 proteins in 115 species: Archae - 0; Bacteria - 83; Metazoa - 160; Fungi - 2; Plants - 80; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (gnl|cdd|38584 : 201.0) no description available & (reliability: 490.0) & (original description: Putative At2g04690, Description = At2g04690/F28I8.27, PFAM = PF13883)' T '35.1' 'not assigned.no ontology' 'niben101scf04801_60256-73437' '(at2g36330 : 193.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT5G62820.1); Has 241 Blast hits to 239 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 1; Plants - 232; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68120 : 102.0) no description available & (reliability: 386.0) & (original description: Putative PGSC0003DMG400024498, Description = CASP-like protein, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf04801_133907-137716' '(at5g62840 : 380.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 111 Blast hits to 111 proteins in 37 species: Archae - 0; Bacteria - 29; Metazoa - 0; Fungi - 2; Plants - 55; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 760.0) & (original description: Putative At5g62840, Description = Phosphoglycerate mutase family protein, PFAM = PF00300)' T '35.1' 'not assigned.no ontology' 'niben101scf04802_187735-200764' '(at1g13030 : 168.0) sphere organelles protein-related; Has 14464 Blast hits to 9695 proteins in 837 species: Archae - 14; Bacteria - 1320; Metazoa - 4989; Fungi - 1376; Plants - 652; Viruses - 103; Other Eukaryotes - 6010 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative COIL, Description = Atcoilin, PFAM = PF15862)' T '35.1' 'not assigned.no ontology' 'niben101scf04819_189996-204064' '(at4g02110 : 333.0) transcription coactivators; FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein (TAIR:AT1G67180.1); Has 6090 Blast hits to 4661 proteins in 497 species: Archae - 12; Bacteria - 945; Metazoa - 2581; Fungi - 684; Plants - 424; Viruses - 13; Other Eukaryotes - 1431 (source: NCBI BLink). & (gnl|cdd|37140 : 95.1) no description available & (reliability: 666.0) & (original description: Putative At4g02110, Description = BRCA1 C Terminus domain containing protein, expressed, PFAM = PF12738;PF00533)' T '35.1' 'not assigned.no ontology' 'niben101scf04820_16860-23524' '(at1g80280 : 755.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G15490.1); Has 7676 Blast hits to 7658 proteins in 1204 species: Archae - 71; Bacteria - 5735; Metazoa - 276; Fungi - 71; Plants - 550; Viruses - 0; Other Eukaryotes - 973 (source: NCBI BLink). & (gnl|cdd|36667 : 194.0) no description available & (gnl|cdd|30941 : 97.1) no description available & (reliability: 1510.0) & (original description: Putative BnaC02g23220D, Description = BnaC02g23220D protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf04831_147-12054' '(at5g42950 : 627.0) GYF domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GYF (InterPro:IPR003169); BEST Arabidopsis thaliana protein match is: GYF domain-containing protein (TAIR:AT1G24300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37073 : 84.8) no description available & (reliability: 1254.0) & (original description: Putative BnaAnng21680D, Description = Putative ovule protein, PFAM = PF02213)' T '35.1' 'not assigned.no ontology' 'niben101scf04832_187591-198966' '(at5g12220 : 301.0) las1-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Las1-like (InterPro:IPR007174). & (gnl|cdd|37636 : 215.0) no description available & (gnl|cdd|67640 : 154.0) no description available & (reliability: 602.0) & (original description: Putative , Description = Putative pre-rRNA-processing protein las1-like, PFAM = PF04031)' T '35.1' 'not assigned.no ontology' 'niben101scf04847_222650-232854' '(at3g13200 : 212.0) EMBRYO DEFECTIVE 2769 (EMB2769); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: spliceosomal complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cwf15/Cwc15 cell cycle control protein (InterPro:IPR006973); Has 4871 Blast hits to 3670 proteins in 321 species: Archae - 3; Bacteria - 193; Metazoa - 1657; Fungi - 645; Plants - 225; Viruses - 150; Other Eukaryotes - 1998 (source: NCBI BLink). & (gnl|cdd|68463 : 199.0) no description available & (gnl|cdd|38438 : 177.0) no description available & (reliability: 424.0) & (original description: Putative cwc15, Description = Pre-mRNA-splicing factor cwc15, PFAM = PF04889)' T '35.1' 'not assigned.no ontology' 'niben101scf04867_40652-44215' '(at5g59480 : 338.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyrimidine 5-nucleotidase (InterPro:IPR010237), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G02230.2); Has 2207 Blast hits to 2204 proteins in 462 species: Archae - 6; Bacteria - 693; Metazoa - 0; Fungi - 141; Plants - 199; Viruses - 0; Other Eukaryotes - 1168 (source: NCBI BLink). & (gnl|cdd|38319 : 302.0) no description available & (gnl|cdd|31215 : 87.7) no description available & (reliability: 676.0) & (original description: Putative nod33, Description = Putative phosphatase, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf04869_805070-815148' '(at3g20920 : 413.0) translocation protein-related; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translocation protein Sec62 (InterPro:IPR004728); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38138 : 226.0) no description available & (reliability: 826.0) & (original description: Putative At3g20920, Description = Putative uncharacterized protein At3g20920, PFAM = PF03839)' T '35.1' 'not assigned.no ontology' 'niben101scf04875_225402-237826' '(at2g37730 : 490.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT3G11420.1); Has 511 Blast hits to 500 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 144; Plants - 279; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|68226 : 252.0) no description available & (gnl|cdd|37457 : 202.0) no description available & (reliability: 980.0) & (original description: Putative GT31C5, Description = Transferring glycosyl group transferase, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben101scf04914_14178-18659' '(at4g18930 : 174.0) RNA ligase/cyclic nucleotide phosphodiesterase family protein; CONTAINS InterPro DOMAIN/s: RNA ligase/cyclic nucleotide phosphodiesterase (InterPro:IPR009097), 2',3'-cyclic-nucleotide 3'-phosphodiesterase (InterPro:IPR012386); BEST Arabidopsis thaliana protein match is: RNA ligase/cyclic nucleotide phosphodiesterase family protein (TAIR:AT4G18940.1); Has 112 Blast hits to 112 proteins in 29 species: Archae - 3; Bacteria - 12; Metazoa - 0; Fungi - 8; Plants - 58; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|87380 : 122.0) no description available & (reliability: 348.0) & (original description: Putative PGSC0003DMG400028444, Description = RNA ligase/cyclic nucleotide phosphodiesterase family protein, PFAM = PF07823)' T '35.1' 'not assigned.no ontology' 'niben101scf04915_98775-110425' '(at4g27860 : 121.0) vacuolar iron transporter (VIT) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: embryo, hypocotyl, root, pedicel, leaf; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217), Cytokine, IL-1-like (InterPro:IPR008996); BEST Arabidopsis thaliana protein match is: Vacuolar iron transporter (VIT) family protein (TAIR:AT4G27870.1). & (reliability: 242.0) & (original description: Putative PGSC0003DMG400027948, Description = Vacuolar iron transporter-like protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf04921_165823-178406' '(gnl|cdd|39878 : 154.0) no description available & (at3g11780 : 152.0) MD-2-related lipid recognition domain-containing protein / ML domain-containing protein; CONTAINS InterPro DOMAIN/s: MD-2-related lipid-recognition (InterPro:IPR003172), Protein of unknown function DUF907, fungi (InterPro:IPR010308); BEST Arabidopsis thaliana protein match is: Immunoglobulin E-set superfamily protein (TAIR:AT5G06480.1). & (gnl|cdd|29928 : 112.0) no description available & (reliability: 304.0) & (original description: Putative ml, Description = Putative ML domain protein, PFAM = PF02221)' T '35.1' 'not assigned.no ontology' 'niben101scf04934_176090-187632' '(gnl|cdd|39878 : 154.0) no description available & (at3g11780 : 150.0) MD-2-related lipid recognition domain-containing protein / ML domain-containing protein; CONTAINS InterPro DOMAIN/s: MD-2-related lipid-recognition (InterPro:IPR003172), Protein of unknown function DUF907, fungi (InterPro:IPR010308); BEST Arabidopsis thaliana protein match is: Immunoglobulin E-set superfamily protein (TAIR:AT5G06480.1). & (gnl|cdd|29928 : 111.0) no description available & (reliability: 300.0) & (original description: Putative ml, Description = Putative ML domain protein, PFAM = PF02221)' T '35.1' 'not assigned.no ontology' 'niben101scf04939_302883-311164' '(at1g13030 : 132.0) sphere organelles protein-related; Has 14464 Blast hits to 9695 proteins in 837 species: Archae - 14; Bacteria - 1320; Metazoa - 4989; Fungi - 1376; Plants - 652; Viruses - 103; Other Eukaryotes - 6010 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative COIL, Description = Atcoilin, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf04979_299773-312871' '(at4g24970 : 710.0) Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; FUNCTIONS IN: ATP binding; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (TAIR:AT5G50780.1); Has 769 Blast hits to 718 proteins in 131 species: Archae - 4; Bacteria - 82; Metazoa - 313; Fungi - 18; Plants - 223; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|37056 : 476.0) no description available & (reliability: 1354.0) & (original description: Putative MORC4, Description = Protein MICRORCHIDIA 4, PFAM = PF13589)' T '35.1' 'not assigned.no ontology' 'niben101scf04992_214353-218486' '(at2g20590 : 265.0) Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, chloroplast; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT4G28430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 530.0) & (original description: Putative RTNLB17, Description = Reticulon-like protein B17, PFAM = PF02453)' T '35.1' 'not assigned.no ontology' 'niben101scf05002_10008-12877' '(at2g31670 : 227.0) Stress responsive alpha-beta barrel domain protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: peroxisome, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Stress responsive alpha-beta barrel (InterPro:IPR013097), Dimeric alpha-beta barrel (InterPro:IPR011008); BEST Arabidopsis thaliana protein match is: dimeric A/B barrel domainS-protein 1 (TAIR:AT1G51360.1); Has 222 Blast hits to 216 proteins in 57 species: Archae - 0; Bacteria - 79; Metazoa - 0; Fungi - 4; Plants - 128; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative UP3, Description = Stress-response A/B barrel domain-containing protein UP3, PFAM = PF07876;PF07876)' T '35.1' 'not assigned.no ontology' 'niben101scf05014_46351-70758' '(at5g62600 : 1347.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G12930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37292 : 426.0) no description available & (reliability: 2694.0) & (original description: Putative MOS14, Description = Transportin MOS14, PFAM = PF03810;PF08389)' T '35.1' 'not assigned.no ontology' 'niben101scf05029_217237-222499' '(at1g07615 : 298.0) GTP-binding protein Obg/CgtA; FUNCTIONS IN: magnesium ion binding, GTP binding, GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG subdomain (InterPro:IPR006169), GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917), GTP-binding protein Obg/CgtA (InterPro:IPR014100); BEST Arabidopsis thaliana protein match is: GTP1/OBG family protein (TAIR:AT5G18570.1); Has 28571 Blast hits to 22114 proteins in 2954 species: Archae - 681; Bacteria - 18882; Metazoa - 872; Fungi - 715; Plants - 429; Viruses - 2; Other Eukaryotes - 6990 (source: NCBI BLink). & (gnl|cdd|36702 : 269.0) no description available & (gnl|cdd|84060 : 240.0) no description available & (reliability: 596.0) & (original description: Putative ATOBGM, Description = Probable GTP-binding protein OBGM, mitochondrial, PFAM = PF01926;PF01018)' T '35.1' 'not assigned.no ontology' 'niben101scf05037_21794-25293' '(gnl|cdd|68120 : 97.7) no description available & (at4g25040 : 81.3) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT4G03540.1); Has 574 Blast hits to 574 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 574; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative GSVIVT00018013001, Description = CASP-like protein, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf05041_44447-46740' '(at2g39725 : 100.0) LYR family of Fe/S cluster biogenesis protein; FUNCTIONS IN: catalytic activity; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Complex 1 LYR protein (InterPro:IPR008011); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative , Description = , PFAM = PF05347)' T '35.1' 'not assigned.no ontology' 'niben101scf05041_207463-570753' '(at4g15050 : 218.0) Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G10190.1); Has 633 Blast hits to 604 proteins in 22 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 6; Plants - 620; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66735 : 152.0) no description available & (reliability: 402.0) & (original description: Putative , Description = , PFAM = PF03080;PF14365)' T '35.1' 'not assigned.no ontology' 'niben101scf05043_129037-131774' '(at1g59590 : 113.0) ZCF37 mRNA, complete cds; ZCF37; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10220.1); Has 33 Blast hits to 33 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative PGSC0003DMG400010618, Description = ZCF37, putative, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf05048_60357-68260' '(at2g37960 : 233.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54060.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative TCM_021789, Description = DNA double-strand break repair rad50 ATPase, putative isoform 1, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf05056_54200-56832' '(at4g11655 : 125.0) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G36330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative At4g11655, Description = CASP-like protein 4A4, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf05060_805553-808436' '(at5g15290 : 157.0) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT1G14160.1); Has 635 Blast hits to 635 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 635; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68120 : 120.0) no description available & (reliability: 314.0) & (original description: Putative STG, Description = CASP-like protein, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf05077_134741-139555' '(at3g44020 : 136.0) thylakoid lumenal P17.1 protein; Has 71 Blast hits to 71 proteins in 23 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative Sb03g035890, Description = Putative uncharacterized protein Sb03g035890, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf05084_242890-246735' '(gnl|cdd|68120 : 102.0) no description available & (at4g25040 : 84.0) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT4G03540.1); Has 574 Blast hits to 574 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 574; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative PGSC0003DMG400026944, Description = CASP-like protein, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf05135_414226-743494' '(at1g19260 : 384.0) TTF-type zinc finger protein with HAT dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09660.1); Has 1044 Blast hits to 976 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 1; Plants - 428; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 768.0) & (original description: Putative Sb10g023530, Description = Putative uncharacterized protein Sb10g023530, PFAM = PF14291)' T '35.1' 'not assigned.no ontology' 'niben101scf05151_160291-169591' '(at3g60260 : 456.0) ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT2G44770.1); Has 836 Blast hits to 836 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 495; Fungi - 36; Plants - 182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|38208 : 310.0) no description available & (gnl|cdd|68305 : 228.0) no description available & (reliability: 912.0) & (original description: Putative ZOSMA_259G00150, Description = ELMO domain-containing protein A, PFAM = PF04727)' T '35.1' 'not assigned.no ontology' 'niben101scf05151_371265-397644' '(at1g02145 : 657.0) homolog of asparagine-linked glycosylation 12 (ALG12); FUNCTIONS IN: alpha-1,6-mannosyltransferase activity; INVOLVED IN: ER-associated protein catabolic process, protein amino acid terminal N-glycosylation; LOCATED IN: intrinsic to endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: Alg9-like mannosyltransferase (InterPro:IPR005599); BEST Arabidopsis thaliana protein match is: Alg9-like mannosyltransferase family (TAIR:AT1G16900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37727 : 386.0) no description available & (gnl|cdd|86471 : 124.0) no description available & (reliability: 1314.0) & (original description: Putative ALG12, Description = Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase, PFAM = PF03901)' T '35.1' 'not assigned.no ontology' 'niben101scf05155_15641-24228' '(at1g19980 : 96.7) cytomatrix protein-related; Has 8598 Blast hits to 6353 proteins in 629 species: Archae - 108; Bacteria - 984; Metazoa - 3794; Fungi - 795; Plants - 240; Viruses - 29; Other Eukaryotes - 2648 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative PGSC0003DMG400009864, Description = Putative kinesin-like protein K39-like, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf05166_742491-747527' '(at5g62740 : 504.0) HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1 (HIR1); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT1G69840.7); Has 5648 Blast hits to 5647 proteins in 1784 species: Archae - 171; Bacteria - 3783; Metazoa - 267; Fungi - 306; Plants - 270; Viruses - 3; Other Eukaryotes - 848 (source: NCBI BLink). & (gnl|cdd|37831 : 380.0) no description available & (gnl|cdd|48219 : 360.0) no description available & (reliability: 1008.0) & (original description: Putative HIR1, Description = Hypersensitive-induced response protein 1, PFAM = PF01145)' T '35.1' 'not assigned.no ontology' 'niben101scf05173_427790-448879' '(at1g02100 : 422.0) Leucine carboxyl methyltransferase; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine carboxyl methyltransferase, LCTM1 1 (InterPro:IPR016651), Leucine carboxyl methyltransferase, eukaryotic (InterPro:IPR021121), Leucine carboxyl methyltransferase (InterPro:IPR007213); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86530 : 234.0) no description available & (gnl|cdd|38129 : 227.0) no description available & (reliability: 844.0) & (original description: Putative PPM2, Description = tRNA wybutosine-synthesizing protein 4, PFAM = PF04072)' T '35.1' 'not assigned.no ontology' 'niben101scf05174_722268-755048' '(at4g17650 : 290.0) Polyketide cyclase / dehydrase and lipid transport protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031); Has 2562 Blast hits to 2558 proteins in 1000 species: Archae - 0; Bacteria - 1601; Metazoa - 177; Fungi - 106; Plants - 52; Viruses - 1; Other Eukaryotes - 625 (source: NCBI BLink). & (gnl|cdd|38387 : 216.0) no description available & (gnl|cdd|32694 : 110.0) no description available & (reliability: 580.0) & (original description: Putative , Description = CK II beta, PFAM = PF03364)' T '35.1' 'not assigned.no ontology' 'niben101scf05183_13246-19776' '(at2g43970 : 276.0) RNA-binding protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: ribonucleoprotein complex, nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344); BEST Arabidopsis thaliana protein match is: RNA-binding protein (TAIR:AT3G19090.1); Has 5536 Blast hits to 4258 proteins in 377 species: Archae - 4; Bacteria - 395; Metazoa - 1833; Fungi - 479; Plants - 433; Viruses - 20; Other Eukaryotes - 2372 (source: NCBI BLink). & (gnl|cdd|37066 : 262.0) no description available & (gnl|cdd|47984 : 106.0) no description available & (reliability: 552.0) & (original description: Putative Sb08g007220, Description = Putative uncharacterized protein Sb08g007220, PFAM = PF05383)' T '35.1' 'not assigned.no ontology' 'niben101scf05188_291861-294703' '(at2g17570 : 308.0) Undecaprenyl pyrophosphate synthetase family protein; FUNCTIONS IN: transferase activity, transferring alkyl or aryl (other than methyl) groups; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Di-trans-poly-cis-decaprenylcistransferase-like, conserved site (InterPro:IPR018520), Di-trans-poly-cis-decaprenylcistransferase-like (InterPro:IPR001441); BEST Arabidopsis thaliana protein match is: Undecaprenyl pyrophosphate synthetase family protein (TAIR:AT5G60510.1); Has 9017 Blast hits to 8995 proteins in 2779 species: Archae - 230; Bacteria - 5298; Metazoa - 197; Fungi - 223; Plants - 211; Viruses - 0; Other Eukaryotes - 2858 (source: NCBI BLink). & (gnl|cdd|36815 : 282.0) no description available & (gnl|cdd|29593 : 225.0) no description available & (reliability: 616.0) & (original description: Putative dhdds, Description = Alkyl transferase, PFAM = PF01255)' T '35.1' 'not assigned.no ontology' 'niben101scf05193_13297-16784' '(at5g03700 : 457.0) D-mannose binding lectin protein with Apple-like carbohydrate-binding domain; FUNCTIONS IN: sugar binding; INVOLVED IN: recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: stem, sperm cell, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-1 domain (InterPro:IPR003014), S-locus glycoprotein (InterPro:IPR000858); BEST Arabidopsis thaliana protein match is: S-domain-2 5 (TAIR:AT4G32300.1); Has 2091 Blast hits to 2063 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17801|kpro_maize : 90.9) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 914.0) & (original description: Putative At5g03700, Description = D-mannose-binding lectin protein, putative, PFAM = PF01453;PF00954;PF08276)' T '35.1' 'not assigned.no ontology' 'niben101scf05206_565997-569896' '(at3g55390 : 207.0) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G38480.1); Has 361 Blast hits to 361 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 361; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68120 : 84.6) no description available & (reliability: 414.0) & (original description: Putative POPTRDRAFT_822486, Description = CASP-like protein 4C2, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf05230_177298-184193' '(at5g40570 : 149.0) Surfeit locus protein 2 (SURF2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Surfeit locus 2 (InterPro:IPR008833); BEST Arabidopsis thaliana protein match is: Surfeit locus protein 2 (SURF2) (TAIR:AT5G14440.1); Has 83 Blast hits to 79 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 37; Fungi - 2; Plants - 33; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|69025 : 91.0) no description available & (reliability: 298.0) & (original description: Putative TCM_016999, Description = Surfeit locus protein 2, putative isoform 1, PFAM = PF05477)' T '35.1' 'not assigned.no ontology' 'niben101scf05238_73406-79708' '(at5g12460 : 400.0) Protein of unknown function (DUF604); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT2G37730.1); Has 562 Blast hits to 553 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 108; Fungi - 170; Plants - 273; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|68226 : 241.0) no description available & (gnl|cdd|37457 : 174.0) no description available & (reliability: 800.0) & (original description: Putative BnaA10g29930D, Description = BnaA10g29930D protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben101scf05249_899748-914218' '(at3g44510 : 360.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, root; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G08310.1). & (reliability: 684.0) & (original description: Putative T17B22.8, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'niben101scf05290_1732-5050' '(at3g63060 : 316.0) EID1-like 3 (EDL3); BEST Arabidopsis thaliana protein match is: EID1-like 1 (TAIR:AT5G15440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36784 : 158.0) no description available & (reliability: 632.0) & (original description: Putative EDL3, Description = EID1-like F-box protein 3, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf05295_380163-414720' '(at3g12760 : 317.0) CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast hits to 855 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (gnl|cdd|38287 : 238.0) no description available & (gnl|cdd|86365 : 128.0) no description available & (reliability: 634.0) & (original description: Putative RP42, Description = Defective in cullin neddylation protein, PFAM = PF03556;PF14555)' T '35.1' 'not assigned.no ontology' 'niben101scf05295_392797-411358' '(at3g12760 : 177.0) CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast hits to 855 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (gnl|cdd|38287 : 123.0) no description available & (reliability: 354.0) & (original description: Putative At3g12760, Description = Defective in cullin neddylation protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf05298_505213-507696' '(at3g05550 : 99.4) Hypoxia-responsive family protein; CONTAINS InterPro DOMAIN/s: Hypoxia induced protein, conserved region (InterPro:IPR007667); BEST Arabidopsis thaliana protein match is: Hypoxia-responsive family protein (TAIR:AT5G27760.1); Has 144 Blast hits to 144 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 45; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 198.8) & (original description: Putative HR2, Description = Hypoxia-responsive family protein, PFAM = PF04588)' T '35.1' 'not assigned.no ontology' 'niben101scf05301_338304-341485' '(at1g03440 : 531.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT4G03010.1); Has 51202 Blast hits to 18238 proteins in 817 species: Archae - 16; Bacteria - 1653; Metazoa - 5878; Fungi - 321; Plants - 40223; Viruses - 0; Other Eukaryotes - 3111 (source: NCBI BLink). & (p93194|rpk1_iponi : 97.8) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1062.0) & (original description: Putative At1g03440, Description = Protein kinase (F21B7.6) like protein, PFAM = PF13516;PF13516;PF08263)' T '35.1' 'not assigned.no ontology' 'niben101scf05306_44941-86255' '(at5g13560 : 437.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37370.1); Has 12055 Blast hits to 8846 proteins in 811 species: Archae - 217; Bacteria - 1046; Metazoa - 6104; Fungi - 1115; Plants - 528; Viruses - 14; Other Eukaryotes - 3031 (source: NCBI BLink). & (reliability: 874.0) & (original description: Putative PGSC0003DMG400023933, Description = At5g13560, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf05310_146563-148977' '(gnl|cdd|37779 : 118.0) no description available & (at2g01070 : 103.0) Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G72480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87161 : 99.1) no description available & (reliability: 206.0) & (original description: Putative At1g61670, Description = Transmembrane receptor, eukaryota, PFAM = PF06814)' T '35.1' 'not assigned.no ontology' 'niben101scf05319_582205-586524' '(at3g06130 : 133.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G19090.3). & (gnl|cdd|36816 : 91.6) no description available & (reliability: 266.0) & (original description: Putative At1g23000, Description = Chloroplast-targeted copper chaperone, putative, PFAM = PF00403)' T '35.1' 'not assigned.no ontology' 'niben101scf05323_287253-296796' '(at1g28340 : 805.0) receptor like protein 4 (RLP4); INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Malectin/receptor-like protein kinase (InterPro:IPR021720), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Leucine-rich repeat domain (TAIR:AT1G25570.1); Has 80698 Blast hits to 16677 proteins in 704 species: Archae - 13; Bacteria - 1525; Metazoa - 2886; Fungi - 292; Plants - 72469; Viruses - 0; Other Eukaryotes - 3513 (source: NCBI BLink). & (q8lkz1|nork_pea : 95.5) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 1610.0) & (original description: Putative RLP4, Description = Receptor like protein 4, PFAM = PF12819;PF13855)' T '35.1' 'not assigned.no ontology' 'niben101scf05326_46274-48504' '(gnl|cdd|28751 : 202.0) no description available & (at4g39730 : 182.0) Lipase/lipooxygenase, PLAT/LH2 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976); BEST Arabidopsis thaliana protein match is: Lipase/lipooxygenase, PLAT/LH2 family protein (TAIR:AT2G22170.1); Has 247 Blast hits to 225 proteins in 46 species: Archae - 0; Bacteria - 3; Metazoa - 94; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative TinI, Description = TMV-induced protein I, PFAM = PF01477)' T '35.1' 'not assigned.no ontology' 'niben101scf05326_48505-50977' '(gnl|cdd|28751 : 194.0) no description available & (at4g39730 : 170.0) Lipase/lipooxygenase, PLAT/LH2 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976); BEST Arabidopsis thaliana protein match is: Lipase/lipooxygenase, PLAT/LH2 family protein (TAIR:AT2G22170.1); Has 247 Blast hits to 225 proteins in 46 species: Archae - 0; Bacteria - 3; Metazoa - 94; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative TinI, Description = PLAT-plant-stress protein, PFAM = PF01477)' T '35.1' 'not assigned.no ontology' 'niben101scf05326_78810-81468' '(gnl|cdd|28751 : 222.0) no description available & (at4g39730 : 207.0) Lipase/lipooxygenase, PLAT/LH2 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976); BEST Arabidopsis thaliana protein match is: Lipase/lipooxygenase, PLAT/LH2 family protein (TAIR:AT2G22170.1); Has 247 Blast hits to 225 proteins in 46 species: Archae - 0; Bacteria - 3; Metazoa - 94; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative JR14, Description = Putative root storage protein, PFAM = PF01477)' T '35.1' 'not assigned.no ontology' 'niben101scf05346_467022-469864' '(at1g67350 : 112.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photorespiration; LOCATED IN: mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative , Description = Putative NADH-ubiquinone oxidoreductase 11 kDa subunit-like, PFAM = PF17250)' T '35.1' 'not assigned.no ontology' 'niben101scf05346_487447-491345' '(at1g67360 : 194.0) Rubber elongation factor protein (REF); INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rubber elongation factor (InterPro:IPR008802); BEST Arabidopsis thaliana protein match is: Rubber elongation factor protein (REF) (TAIR:AT2G47780.1); Has 125 Blast hits to 125 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69288 : 192.0) no description available & (o82803|srpp_hevbr : 108.0) Small rubber particle protein (SRPP) (22 kDa rubber particle protein) (22 kDa RPP) (Latex allergen Hev b 3) (27 kDa natural rubber allergen) - Hevea brasiliensis (Para rubber tree) & (reliability: 388.0) & (original description: Putative At1g67360, Description = REF/SRPP-like protein At1g67360, PFAM = PF05755)' T '35.1' 'not assigned.no ontology' 'niben101scf05346_968734-999046' '(at1g22860 : 994.0) Vacuolar sorting protein 39; FUNCTIONS IN: small GTPase regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Citron-like (InterPro:IPR001180), Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1 (InterPro:IPR019452), Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2 (InterPro:IPR019453); Has 401 Blast hits to 372 proteins in 133 species: Archae - 0; Bacteria - 2; Metazoa - 168; Fungi - 105; Plants - 74; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|37274 : 431.0) no description available & (reliability: 1988.0) & (original description: Putative BnaA09g30320D, Description = BnaA09g30320D protein, PFAM = PF00780;PF00637;PF10366;PF10367)' T '35.1' 'not assigned.no ontology' 'niben101scf05360_43836-60410' '(at5g37530 : 633.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: co-factor for nitrate, reductase and xanthine dehydrogenase 5 (TAIR:AT5G55130.1); Has 12378 Blast hits to 12300 proteins in 2371 species: Archae - 214; Bacteria - 8305; Metazoa - 788; Fungi - 632; Plants - 298; Viruses - 0; Other Eukaryotes - 2141 (source: NCBI BLink). & (gnl|cdd|37229 : 505.0) no description available & (gnl|cdd|30110 : 280.0) no description available & (reliability: 1266.0) & (original description: Putative YEX1, Description = Uncharacterized protein YKL027W, PFAM = PF00899)' T '35.1' 'not assigned.no ontology' 'niben101scf05369_15753-18068' '(at1g69800 : 107.0) Cystathionine beta-synthase (CBS) protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: SNF1-related protein kinase regulatory subunit gamma 1 (TAIR:AT3G48530.1); Has 884 Blast hits to 801 proteins in 238 species: Archae - 117; Bacteria - 172; Metazoa - 187; Fungi - 63; Plants - 180; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative pco100151b, Description = SNF1-related protein kinase regulatory subunit gamma-1-like, PFAM = PF00571)' T '35.1' 'not assigned.no ontology' 'niben101scf05373_241972-248870' '(at2g39570 : 566.0) ACT domain-containing protein; FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT-like superfamily protein (TAIR:AT2G36840.1); Has 465 Blast hits to 403 proteins in 46 species: Archae - 0; Bacteria - 48; Metazoa - 0; Fungi - 0; Plants - 388; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|80393 : 126.0) no description available & (reliability: 1132.0) & (original description: Putative ACR9, Description = ACT domain-containing protein ACR9, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf05405_630171-634417' '(at5g19290 : 494.0) alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G14980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36668 : 372.0) no description available & (gnl|cdd|32448 : 127.0) no description available & (reliability: 988.0) & (original description: Putative At5g19290, Description = Esterase/lipase/thioesterase family protein, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'niben101scf05407_84790-100156' '(at5g48440 : 525.0) FAD-dependent oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076); Has 4216 Blast hits to 4216 proteins in 1050 species: Archae - 57; Bacteria - 3005; Metazoa - 218; Fungi - 66; Plants - 52; Viruses - 0; Other Eukaryotes - 818 (source: NCBI BLink). & (gnl|cdd|31009 : 143.0) no description available & (gnl|cdd|38055 : 91.9) no description available & (reliability: 1050.0) & (original description: Putative BnaA06g30210D, Description = BnaA06g30210D protein, PFAM = PF01266)' T '35.1' 'not assigned.no ontology' 'niben101scf05438_341098-346743' '(at1g11820 : 724.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT2G01630.1). & (gnl|cdd|84700 : 244.0) no description available & (p52409|e13b_wheat : 232.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 1448.0) & (original description: Putative At1g11820, Description = Glucan endo-1,3-beta-glucosidase 1, PFAM = PF00332;PF07983)' T '35.1' 'not assigned.no ontology' 'niben101scf05442_179011-189858' '(at2g37020 : 363.0) Translin family protein; FUNCTIONS IN: sequence-specific DNA binding, DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translin, C-terminal (InterPro:IPR016069), Translin (InterPro:IPR002848), Translin, N-terminal (InterPro:IPR016068). & (gnl|cdd|38277 : 249.0) no description available & (gnl|cdd|85824 : 118.0) no description available & (reliability: 726.0) & (original description: Putative TSN, Description = Translin, isoform CRA_b, PFAM = PF01997)' T '35.1' 'not assigned.no ontology' 'niben101scf05449_285993-301152' '(at4g29540 : 388.0) bacterial transferase hexapeptide repeat-containing protein; FUNCTIONS IN: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity, transferase activity; INVOLVED IN: lipid biosynthetic process; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (InterPro:IPR010137); BEST Arabidopsis thaliana protein match is: Trimeric LpxA-like enzymes superfamily protein (TAIR:AT4G05210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|81502 : 301.0) no description available & (reliability: 776.0) & (original description: Putative LPXA, Description = Probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, mitochondrial, PFAM = PF13720;PF00132;PF00132;PF00132)' T '35.1' 'not assigned.no ontology' 'niben101scf05453_32784-39872' '(at3g61200 : 137.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT1G04290.1); Has 296 Blast hits to 296 proteins in 69 species: Archae - 1; Bacteria - 37; Metazoa - 61; Fungi - 14; Plants - 161; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|38538 : 82.2) no description available & (reliability: 274.0) & (original description: Putative , Description = Acyl-CoA thioesterase, putative, PFAM = PF03061)' T '35.1' 'not assigned.no ontology' 'niben101scf05453_84828-87358' '(at2g45760 : 105.0) encodes a protein that is similar to BONZAI1-binding protein BAP1.; BON association protein 2 (BAP2); CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: BON association protein 1 (TAIR:AT3G61190.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative , Description = , PFAM = PF00168)' T '35.1' 'not assigned.no ontology' 'niben101scf05459_162927-172212' '(at4g22990 : 774.0) Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein (TAIR:AT4G11810.1). & (gnl|cdd|37536 : 291.0) no description available & (reliability: 1548.0) & (original description: Putative BnaA05g18300D, Description = BnaA05g18300D protein, PFAM = PF07690)' T '35.1' 'not assigned.no ontology' 'niben101scf05468_327907-330926' '(at2g43770 : 603.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 103598 Blast hits to 39924 proteins in 946 species: Archae - 84; Bacteria - 11408; Metazoa - 41998; Fungi - 22646; Plants - 13468; Viruses - 6; Other Eukaryotes - 13988 (source: NCBI BLink). & (gnl|cdd|35486 : 490.0) no description available & (gnl|cdd|29257 : 218.0) no description available & (p93107|pf20_chlre : 100.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1206.0) & (original description: Putative wdr57, Description = WD40 repeat-containing protein, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf05483_1241313-1259897' '(at5g13020 : 351.0) Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), ENT (InterPro:IPR005491); BEST Arabidopsis thaliana protein match is: Emsy N Terminus (ENT) domain-containing protein (TAIR:AT2G44440.1); Has 417 Blast hits to 397 proteins in 49 species: Archae - 0; Bacteria - 2; Metazoa - 101; Fungi - 4; Plants - 307; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|39874 : 202.0) no description available & (gnl|cdd|67356 : 114.0) no description available & (reliability: 702.0) & (original description: Putative EML3, Description = Protein EMSY-LIKE 3, PFAM = PF03735)' T '35.1' 'not assigned.no ontology' 'niben101scf05484_263398-267352' '(at5g64150 : 415.0) RNA methyltransferase family protein; FUNCTIONS IN: protein methyltransferase activity, methyltransferase activity, catalytic activity, nucleic acid binding; INVOLVED IN: methylation, protein amino acid methylation; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase small (InterPro:IPR007848), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), Modification methylase HemK (InterPro:IPR004556); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38115 : 259.0) no description available & (gnl|cdd|32715 : 172.0) no description available & (reliability: 830.0) & (original description: Putative prmC, Description = Release factor glutamine methyltransferase, PFAM = PF06325)' T '35.1' 'not assigned.no ontology' 'niben101scf05486_180104-193836' '(at2g37160 : 760.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G53390.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37605 : 491.0) no description available & (gnl|cdd|29257 : 82.7) no description available & (reliability: 1520.0) & (original description: Putative At2g37160, Description = Transducin/WD-40 repeat-containing protein, PFAM = PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf05491_690294-693220' '(at3g44510 : 300.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, root; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G08310.1). & (reliability: 590.0) & (original description: Putative At1g08310, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf05534_166189-173497' '(at1g71950 : 101.0) Proteinase inhibitor, propeptide; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: negative regulation of catalytic activity; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor, propeptide (InterPro:IPR009020), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8, subtilisin-related (InterPro:IPR015500); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G11940.1); Has 894 Blast hits to 886 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 894; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative At1g71950, Description = At1g71950, PFAM = PF05922)' T '35.1' 'not assigned.no ontology' 'niben101scf05535_191780-196605' '(at3g10210 : 325.0) SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); BEST Arabidopsis thaliana protein match is: SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (TAIR:AT4G35750.1); Has 394 Blast hits to 394 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 260; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|37844 : 131.0) no description available & (reliability: 650.0) & (original description: Putative , Description = , PFAM = PF13716)' T '35.1' 'not assigned.no ontology' 'niben101scf05553_15124-19405' '(at1g78230 : 409.0) Outer arm dynein light chain 1 protein; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Outer arm dynein light chain 1 protein (TAIR:AT4G03260.2); Has 24271 Blast hits to 14439 proteins in 747 species: Archae - 6; Bacteria - 9514; Metazoa - 8699; Fungi - 1002; Plants - 3127; Viruses - 44; Other Eukaryotes - 1879 (source: NCBI BLink). & (gnl|cdd|35751 : 97.6) no description available & (reliability: 818.0) & (original description: Putative At1g78230, Description = Outer arm dynein light chain 1 protein, PFAM = PF12799;PF13855)' T '35.1' 'not assigned.no ontology' 'niben101scf05554_730504-742463' '(at1g38131 : 637.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G38065.1); Has 834 Blast hits to 825 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 834; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 414.0) no description available & (reliability: 1176.0) & (original description: Putative At1g38131, Description = O-fucosyltransferase-like protein, PFAM = PF10250)' T '35.1' 'not assigned.no ontology' 'niben101scf05555_79902-84180' '(at4g37235 : 82.8) Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT3G50810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative ARALYDRAFT_485429, Description = CASP-like protein ARALYDRAFT_485429, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf05565_7216-15044' '(at1g73480 : 501.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G18360.1); Has 6390 Blast hits to 6380 proteins in 1730 species: Archae - 36; Bacteria - 4672; Metazoa - 140; Fungi - 153; Plants - 452; Viruses - 63; Other Eukaryotes - 874 (source: NCBI BLink). & (gnl|cdd|36668 : 361.0) no description available & (gnl|cdd|32448 : 186.0) no description available & (reliability: 1002.0) & (original description: Putative CSE16, Description = Caffeoyl shikimate esterase 16, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'niben101scf05566_516359-537330' '(at2g22400 : 869.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, RNA binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678), Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site (InterPro:IPR018314); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G40000.1); Has 8976 Blast hits to 8942 proteins in 2412 species: Archae - 298; Bacteria - 6215; Metazoa - 583; Fungi - 307; Plants - 251; Viruses - 0; Other Eukaryotes - 1322 (source: NCBI BLink). & (gnl|cdd|37409 : 409.0) no description available & (gnl|cdd|30493 : 193.0) no description available & (reliability: 1738.0) & (original description: Putative TRM4, Description = tRNA-(M5C) methyltransferase, PFAM = PF01189)' T '35.1' 'not assigned.no ontology' 'niben101scf05620_312905-324402' '(at2g03780 : 385.0) Translin family protein; FUNCTIONS IN: sequence-specific DNA binding, DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translin, C-terminal (InterPro:IPR016069), Translin (InterPro:IPR002848), Translin, N-terminal (InterPro:IPR016068); Has 561 Blast hits to 561 proteins in 195 species: Archae - 92; Bacteria - 2; Metazoa - 209; Fungi - 153; Plants - 36; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|38276 : 313.0) no description available & (gnl|cdd|85824 : 197.0) no description available & (reliability: 770.0) & (original description: Putative TRAX, Description = Translin-associated factor X, PFAM = PF01997)' T '35.1' 'not assigned.no ontology' 'niben101scf05620_318842-324438' '(at2g03780 : 343.0) Translin family protein; FUNCTIONS IN: sequence-specific DNA binding, DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translin, C-terminal (InterPro:IPR016069), Translin (InterPro:IPR002848), Translin, N-terminal (InterPro:IPR016068); Has 561 Blast hits to 561 proteins in 195 species: Archae - 92; Bacteria - 2; Metazoa - 209; Fungi - 153; Plants - 36; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|38276 : 277.0) no description available & (gnl|cdd|85824 : 183.0) no description available & (reliability: 686.0) & (original description: Putative TRAX, Description = Translin-associated factor X, PFAM = PF01997)' T '35.1' 'not assigned.no ontology' 'niben101scf05621_562917-566789' '(at1g67360 : 179.0) Rubber elongation factor protein (REF); INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rubber elongation factor (InterPro:IPR008802); BEST Arabidopsis thaliana protein match is: Rubber elongation factor protein (REF) (TAIR:AT2G47780.1); Has 125 Blast hits to 125 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69288 : 179.0) no description available & (o82803|srpp_hevbr : 99.0) Small rubber particle protein (SRPP) (22 kDa rubber particle protein) (22 kDa RPP) (Latex allergen Hev b 3) (27 kDa natural rubber allergen) - Hevea brasiliensis (Para rubber tree) & (reliability: 358.0) & (original description: Putative At1g67360, Description = Rubber elongation factor protein, PFAM = PF05755)' T '35.1' 'not assigned.no ontology' 'niben101scf05627_114218-122759' '(at1g49540 : 1124.0) elongator protein 2 (ELP2); FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G11160.1). & (gnl|cdd|36281 : 758.0) no description available & (gnl|cdd|29257 : 102.0) no description available & (reliability: 2248.0) & (original description: Putative ELP2, Description = Elongator complex protein 2, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf05627_145647-150730' '(at2g01190 : 115.0) Octicosapeptide/Phox/Bem1p family protein; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT3G18230.1); Has 5347 Blast hits to 4615 proteins in 344 species: Archae - 4; Bacteria - 100; Metazoa - 2308; Fungi - 1293; Plants - 931; Viruses - 29; Other Eukaryotes - 682 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative PGSC0003DMG400005971, Description = Octicosapeptide/Phox/Bem1p family protein, putative, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf05628_146560-159878' '(at5g42870 : 341.0) phosphatidic acid phosphohydrolase 2 (PAH2); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: cellular response to phosphate starvation, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LNS2, Lipin/Ned1/Smp2 (InterPro:IPR013209), Lipin, N-terminal conserved region (InterPro:IPR007651); BEST Arabidopsis thaliana protein match is: Lipin family protein (TAIR:AT3G09560.3). & (gnl|cdd|37327 : 337.0) no description available & (gnl|cdd|34687 : 224.0) no description available & (reliability: 682.0) & (original description: Putative ned1, Description = Phosphatidate phosphatase LPIN2, PFAM = PF04571;PF08235)' T '35.1' 'not assigned.no ontology' 'niben101scf05628_147097-192155' '(at5g42870 : 410.0) phosphatidic acid phosphohydrolase 2 (PAH2); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: cellular response to phosphate starvation, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LNS2, Lipin/Ned1/Smp2 (InterPro:IPR013209), Lipin, N-terminal conserved region (InterPro:IPR007651); BEST Arabidopsis thaliana protein match is: Lipin family protein (TAIR:AT3G09560.3). & (gnl|cdd|37327 : 362.0) no description available & (gnl|cdd|71669 : 215.0) no description available & (reliability: 820.0) & (original description: Putative lpin1, Description = Phosphatidate phosphatase LPIN1, PFAM = PF08235;PF04571)' T '35.1' 'not assigned.no ontology' 'niben101scf05674_448514-453638' '(at2g23520 : 1061.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT4G37100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37353 : 663.0) no description available & (reliability: 2122.0) & (original description: Putative At2g23520, Description = Catalytic/ pyridoxal phosphate binding protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf05688_1384008-1393187' '(at4g24160 : 616.0) Encodes a soluble lysophosphatidic acid acyltransferase with additional triacylglycerol lipase and phosphatidylcholine hydrolyzing enzymatic activities. Plays a pivotal role in maintaining the lipid homeostasis by regulating both phospholipid and neutral lipid levels.; alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G64670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39610 : 347.0) no description available & (gnl|cdd|30941 : 101.0) no description available & (reliability: 1232.0) & (original description: Putative At4g24160, Description = 1-acylglycerol-3-phosphate O-acyltransferase, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'niben101scf05692_810712-814277' '(at4g26810 : 125.0) SWIB/MDM2 domain superfamily protein; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121); BEST Arabidopsis thaliana protein match is: SWIB/MDM2 domain superfamily protein (TAIR:AT2G35605.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative , Description = , PFAM = PF02201)' T '35.1' 'not assigned.no ontology' 'niben101scf05692_811065-814196' '(at4g26810 : 148.0) SWIB/MDM2 domain superfamily protein; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121); BEST Arabidopsis thaliana protein match is: SWIB/MDM2 domain superfamily protein (TAIR:AT2G35605.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37157 : 86.3) no description available & (reliability: 296.0) & (original description: Putative , Description = , PFAM = PF02201)' T '35.1' 'not assigned.no ontology' 'niben101scf05697_103800-108441' '(at4g24350 : 400.0) Phosphorylase superfamily protein; FUNCTIONS IN: catalytic activity, nutrient reservoir activity; INVOLVED IN: response to wounding; LOCATED IN: plant-type cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphorylase (InterPro:IPR000845), Nucleoside phosphorylase, family 1 (InterPro:IPR018017); BEST Arabidopsis thaliana protein match is: Phosphorylase superfamily protein (TAIR:AT4G24340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q07469|bspa_popde : 178.0) Bark storage protein A precursor - Populus deltoides (Poplar) & (gnl|cdd|31118 : 90.4) no description available & (reliability: 800.0) & (original description: Putative BnaC01g16290D, Description = BnaC01g16290D protein, PFAM = PF01048)' T '35.1' 'not assigned.no ontology' 'niben101scf05697_1128430-1134049' '(q9swb6|pm36_soybn : 302.0) Seed maturation protein PM36 - Glycine max (Soybean) & (at3g16990 : 289.0) Haem oxygenase-like, multi-helical; CONTAINS InterPro DOMAIN/s: Haem oxygenase-like, multi-helical (InterPro:IPR016084), TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C (InterPro:IPR004305); Has 259 Blast hits to 259 proteins in 88 species: Archae - 23; Bacteria - 94; Metazoa - 0; Fungi - 34; Plants - 38; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (gnl|cdd|86230 : 110.0) no description available & (reliability: 578.0) & (original description: Putative PM36, Description = Formylaminopyrimidine amidohydrolase, PFAM = PF03070)' T '35.1' 'not assigned.no ontology' 'niben101scf05702_234933-239571' '(at3g58830 : 338.0) haloacid dehalogenase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIIA (InterPro:IPR006549), Protein of unknown function DUF2010 (InterPro:IPR019001), HAD-superfamily phosphatase, subfamily IIIA (InterPro:IPR010021); Has 1169 Blast hits to 1165 proteins in 593 species: Archae - 0; Bacteria - 976; Metazoa - 0; Fungi - 84; Plants - 42; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|38172 : 220.0) no description available & (gnl|cdd|87964 : 168.0) no description available & (reliability: 676.0) & (original description: Putative At3g58830, Description = At3g58830, PFAM = PF09419)' T '35.1' 'not assigned.no ontology' 'niben101scf05710_37236-45158' '(at1g10095 : 380.0) Protein prenylyltransferase superfamily protein; FUNCTIONS IN: protein prenyltransferase activity; INVOLVED IN: protein amino acid prenylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein prenyltransferase (InterPro:IPR008940), Protein prenyltransferase, alpha subunit (InterPro:IPR002088); Has 876 Blast hits to 751 proteins in 162 species: Archae - 0; Bacteria - 0; Metazoa - 510; Fungi - 118; Plants - 152; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (reliability: 760.0) & (original description: Putative BnaC07g17910D, Description = BnaC07g17910D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf05711_503021-505584' '(gnl|cdd|86954 : 255.0) no description available & (at5g06660 : 254.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF106, transmembrane (InterPro:IPR002809), Uncharacterised conserved protein UCP023322, transmembrane eukaryotic (InterPro:IPR008559); BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF106, transmembrane (TAIR:AT3G12030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38522 : 245.0) no description available & (reliability: 498.0) & (original description: Putative TMCO1, Description = Transmembrane and coiled-coil domain-containing protein 1, PFAM = PF01956)' T '35.1' 'not assigned.no ontology' 'niben101scf05712_220911-223444' '(at1g14060 : 90.9) GCK domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: GCK (InterPro:IPR012891); BEST Arabidopsis thaliana protein match is: GCK domain-containing protein (TAIR:AT5G02210.1); Has 325 Blast hits to 285 proteins in 75 species: Archae - 0; Bacteria - 2; Metazoa - 95; Fungi - 33; Plants - 117; Viruses - 2; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|71242 : 85.8) no description available & (reliability: 181.8) & (original description: Putative Ccrd_001748, Description = GCK-like protein, PFAM = PF07802)' T '35.1' 'not assigned.no ontology' 'niben101scf05717_281999-287824' '(at3g51730 : 176.0) saposin B domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Saposin B (InterPro:IPR008139), Saposin-like (InterPro:IPR011001), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138); BEST Arabidopsis thaliana protein match is: saposin B domain-containing protein (TAIR:AT5G01800.1); Has 951 Blast hits to 460 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 738; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|36554 : 105.0) no description available & (reliability: 352.0) & (original description: Putative BnaA09g32270D, Description = BnaA09g32260D protein, PFAM = PF05184;PF05184;PF03489)' T '35.1' 'not assigned.no ontology' 'niben101scf05720_718269-720860' '(at2g26610 : 105.0) Transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT3G33530.1); Has 171 Blast hits to 144 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 105; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|37123 : 93.2) no description available & (reliability: 204.0) & (original description: Putative pco087232, Description = Bromodomain and WD repeat-containing protein 2, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf05749_226752-231494' '(at3g43740 : 263.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G21090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p93194|rpk1_iponi : 116.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 526.0) & (original description: Putative LRP, Description = LRR protein, PFAM = PF00560;PF13855;PF08263)' T '35.1' 'not assigned.no ontology' 'niben101scf05755_92673-95827' '(at2g13290 : 526.0) beta-1,4-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 17 (InterPro:IPR006813); BEST Arabidopsis thaliana protein match is: beta-1,4-N-acetylglucosaminyltransferase family protein (TAIR:AT1G12990.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68302 : 507.0) no description available & (reliability: 1052.0) & (original description: Putative Mgat3, Description = Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase, PFAM = PF04724)' T '35.1' 'not assigned.no ontology' 'niben101scf05755_268914-295165' '(at3g33530 : 944.0) Transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT2G26610.1). & (gnl|cdd|37123 : 836.0) no description available & (reliability: 1888.0) & (original description: Putative pco087232, Description = Bromodomain and WD repeat-containing protein 2, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf05761_183924-186304' '(at5g08060 : 136.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; Has 42 Blast hits to 42 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative F13G24.260, Description = Putative uncharacterized protein At5g08060, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf05764_563865-591040' '(at4g36290 : 615.0) R-protein-interacting protein that localizes to endosomes and functions in resistance geneñmediated immunity.; compromised recognition of TCV 1 (CRT1); CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (TAIR:AT4G36280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37056 : 342.0) no description available & (reliability: 1230.0) & (original description: Putative MORC1, Description = Protein MICRORCHIDIA 1, PFAM = PF13589)' T '35.1' 'not assigned.no ontology' 'niben101scf05800_130579-135150' '(at4g31930 : 236.0) Mitochondrial glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: Mitochondrial glycoprotein family protein (TAIR:AT1G80720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37747 : 146.0) no description available & (reliability: 472.0) & (original description: Putative BnaC07g43600D, Description = BnaC07g43600D protein, PFAM = PF02330)' T '35.1' 'not assigned.no ontology' 'niben101scf05804_54786-70702' '(at2g11000 : 818.0) Encodes a non-functional Arabidopsis homolog of the yeast protein MAK10, a component of the N-terminal acetyltransferase complex C. Mutant plants have normal photosynthesis as well as growth rates and pigmentation comparable to wild type.; MAK10 homologue (MAK10); FUNCTIONS IN: acetyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mak10 subunit, NatC N(alpha)-terminal acetyltransferase (InterPro:IPR007244); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37554 : 407.0) no description available & (gnl|cdd|67717 : 174.0) no description available & (reliability: 1636.0) & (original description: Putative glysoja_022400, Description = N-alpha-acetyltransferase 35, NatC auxiliary subunit, PFAM = PF04112)' T '35.1' 'not assigned.no ontology' 'niben101scf05822_503817-506452' '(at3g54200 : 138.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT3G05975.1); Has 631 Blast hits to 630 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 631; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative PGSC0003DMG400020863, Description = Late embryogenesis abundant protein, LEA-14, PFAM = PF03168)' T '35.1' 'not assigned.no ontology' 'niben101scf05848_11452-20463' '(at4g04670 : 1145.0) Met-10+ like family protein / kelch repeat-containing protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Protein of unknown function Met10 (InterPro:IPR003402), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915), tRNA wybutosine-synthesizing protein (InterPro:IPR003827); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G18610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36441 : 341.0) no description available & (gnl|cdd|32590 : 191.0) no description available & (q39610|dyha_chlre : 102.0) Dynein alpha chain, flagellar outer arm (DHC alpha) - Chlamydomonas reinhardtii & (reliability: 2290.0) & (original description: Putative tyw2, Description = tRNA wybutosine-synthesizing protein 2, PFAM = PF01344;PF13418;PF13418;PF13854;PF02475;PF02676)' T '35.1' 'not assigned.no ontology' 'niben101scf05860_95776-109224' '(at3g13070 : 743.0) CBS domain-containing protein / transporter associated domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550), Transporter-associated domain (InterPro:IPR005170), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein / transporter associated domain-containing protein (TAIR:AT1G55930.1); Has 15808 Blast hits to 15803 proteins in 2590 species: Archae - 162; Bacteria - 11531; Metazoa - 244; Fungi - 136; Plants - 197; Viruses - 0; Other Eukaryotes - 3538 (source: NCBI BLink). & (gnl|cdd|31445 : 308.0) no description available & (gnl|cdd|37329 : 306.0) no description available & (reliability: 1486.0) & (original description: Putative corC, Description = Hemolysin-related protein, PFAM = PF00571;PF00571;PF03471;PF01595)' T '35.1' 'not assigned.no ontology' 'niben101scf05883_308969-312251' '(at1g49320 : 249.0) Encodes USPL1, a BURP domain protein targeted to the protein storage vacuoles. Overexpression of USPL1 affects seed development, protein storage vacuoles and lipid vesicles morphology and function.; unknown seed protein like 1 (USPL1); CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: BURP domain-containing protein (TAIR:AT5G25610.1); Has 493 Blast hits to 491 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 493; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66831 : 232.0) no description available & (reliability: 498.0) & (original description: Putative USPL1, Description = BURP domain protein USPL1, PFAM = PF03181)' T '35.1' 'not assigned.no ontology' 'niben101scf05916_265137-275808' '(at2g26770 : 655.0) plectin-related; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40820.1); Has 4722 Blast hits to 4137 proteins in 536 species: Archae - 91; Bacteria - 673; Metazoa - 2162; Fungi - 328; Plants - 350; Viruses - 13; Other Eukaryotes - 1105 (source: NCBI BLink). & (reliability: 1310.0) & (original description: Putative SCAB1, Description = Stomatal closure-related actin-binding protein 1, PFAM = PF16712;PF16711;PF16709)' T '35.1' 'not assigned.no ontology' 'niben101scf05917_37369-40767' '(at1g12390 : 132.0) Cornichon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular signaling pathway; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Cornichon (InterPro:IPR003377); BEST Arabidopsis thaliana protein match is: Cornichon family protein (TAIR:AT1G12340.1); Has 617 Blast hits to 617 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 324; Fungi - 159; Plants - 93; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|37940 : 114.0) no description available & (reliability: 264.0) & (original description: Putative TIDP2751, Description = ER-derived vesicles protein ERV14, PFAM = PF03311)' T '35.1' 'not assigned.no ontology' 'niben101scf05929_743683-749110' '(at1g04555 : 99.8) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G33380.1); Has 84 Blast hits to 83 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 199.6) & (original description: Putative At1g04555, Description = Auxin-responsive protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf05955_229913-247864' '(at1g02330 : 256.0) CONTAINS InterPro DOMAIN/s: Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756); Has 1239 Blast hits to 998 proteins in 204 species: Archae - 4; Bacteria - 71; Metazoa - 421; Fungi - 109; Plants - 87; Viruses - 5; Other Eukaryotes - 542 (source: NCBI BLink). & (gnl|cdd|38555 : 167.0) no description available & (gnl|cdd|70514 : 85.9) no description available & (reliability: 512.0) & (original description: Putative T6A9.2, Description = T6A9.2 protein, PFAM = PF07052)' T '35.1' 'not assigned.no ontology' 'niben101scf05955_358732-370354' '(at1g17330 : 295.0) Metal-dependent phosphohydrolase; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607); Has 1677 Blast hits to 1677 proteins in 841 species: Archae - 70; Bacteria - 1404; Metazoa - 0; Fungi - 90; Plants - 42; Viruses - 5; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|31608 : 96.3) no description available & (reliability: 590.0) & (original description: Putative yedJ, Description = HD domain protein, PFAM = PF01966)' T '35.1' 'not assigned.no ontology' 'niben101scf05964_33434-39995' '(at5g04990 : 326.0) Encodes a member of the Sad1/UNC-84 (SUN)-domain proteins: AtSUN1(At5g04990), AtSUN2(AT3G10730). SUN domain proteins are part of the cytoskeletal-nucleoskeletal bridging complexes. AtSUN1 and AtSUN2 are localized to the nuclear envelope and are present as homomers and heteromers in vivo.; SAD1/UNC-84 domain protein 1 (SUN1); FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: nuclear envelope, endoplasmic reticulum; EXPRESSED IN: inflorescence, cultured cell, callus, leaf; CONTAINS InterPro DOMAIN/s: Sad1/UNC-like, C-terminal (InterPro:IPR012919); BEST Arabidopsis thaliana protein match is: SAD1/UNC-84 domain protein 2 (TAIR:AT3G10730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37898 : 236.0) no description available & (gnl|cdd|87361 : 136.0) no description available & (reliability: 652.0) & (original description: Putative SUN1, Description = Protein SAD1/UNC-84 domain protein 1, PFAM = PF07738)' T '35.1' 'not assigned.no ontology' 'niben101scf05969_10634-13428' '(at5g49560 : 220.0) Putative methyltransferase family protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: Putative methyltransferase family protein (TAIR:AT3G50850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38004 : 146.0) no description available & (reliability: 440.0) & (original description: Putative Ccrd_005610, Description = Nicotinamide N-methyltransferase-like protein, PFAM = PF10294)' T '35.1' 'not assigned.no ontology' 'niben101scf05969_87294-105759' '(at1g63810 : 1147.0) CONTAINS InterPro DOMAIN/s: Nrap protein (InterPro:IPR005554); Has 396 Blast hits to 382 proteins in 182 species: Archae - 3; Bacteria - 2; Metazoa - 142; Fungi - 146; Plants - 43; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|67428 : 734.0) no description available & (gnl|cdd|37265 : 625.0) no description available & (reliability: 2294.0) & (original description: Putative At1g63810, Description = Putative uncharacterized protein At1g63810, PFAM = PF17407;PF17403;PF17406;PF17405;PF17404;PF03813)' T '35.1' 'not assigned.no ontology' 'niben101scf05969_99917-112387' '(at1g63810 : 271.0) CONTAINS InterPro DOMAIN/s: Nrap protein (InterPro:IPR005554); Has 396 Blast hits to 382 proteins in 182 species: Archae - 3; Bacteria - 2; Metazoa - 142; Fungi - 146; Plants - 43; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|67428 : 203.0) no description available & (gnl|cdd|37265 : 151.0) no description available & (reliability: 542.0) & (original description: Putative At1g63810, Description = Nucleolar RNA-associated family protein, PFAM = PF17403;PF03813)' T '35.1' 'not assigned.no ontology' 'niben101scf05972_242260-247181' '(at5g43850 : 296.0) ARD4; FUNCTIONS IN: acireductone dioxygenase [iron(II)-requiring] activity, metal ion binding; INVOLVED IN: L-methionine salvage from methylthioadenosine, oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acireductone dioxygenase, ARD (InterPro:IPR004313), Cupin, RmlC-type (InterPro:IPR011051), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT4G14710.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q58fk4|ard2_orysa : 259.0) 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 (EC 1.13.-.-) (Aci-reductone dioxygenase 2) (Submergence-induced protein 2A) - Oryza sativa (Rice) & (gnl|cdd|37318 : 254.0) no description available & (gnl|cdd|66734 : 193.0) no description available & (reliability: 592.0) & (original description: Putative adi1, Description = 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase, PFAM = PF03079)' T '35.1' 'not assigned.no ontology' 'niben101scf06009_57060-64198' '(at5g07830 : 672.0) Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-β-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be membrane-associated.; glucuronidase 2 (GUS2); FUNCTIONS IN: beta-glucuronidase activity; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 79, N-terminal (InterPro:IPR005199); BEST Arabidopsis thaliana protein match is: glucuronidase 1 (TAIR:AT5G61250.1); Has 380 Blast hits to 370 proteins in 68 species: Archae - 0; Bacteria - 29; Metazoa - 190; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|67288 : 397.0) no description available & (reliability: 1344.0) & (original description: Putative At5g61250, Description = Heparanase-like protein 2, PFAM = PF03662)' T '35.1' 'not assigned.no ontology' 'niben101scf06058_40521-50952' '(at4g39955 : 431.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G09430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36667 : 195.0) no description available & (gnl|cdd|30941 : 125.0) no description available & (reliability: 862.0) & (original description: Putative At4g39955, Description = At4g39955, PFAM = PF00561;PF00561)' T '35.1' 'not assigned.no ontology' 'niben101scf06058_51458-59197' '(at4g39970 : 427.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT3G48420.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30982 : 134.0) no description available & (gnl|cdd|38125 : 102.0) no description available & (reliability: 854.0) & (original description: Putative MNEG_8526, Description = Haloacid dehalogenase-like hydrolase family protein, PFAM = PF13419)' T '35.1' 'not assigned.no ontology' 'niben101scf06081_178603-191986' '(at5g22460 : 402.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, vacuole, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G36290.1); Has 868 Blast hits to 866 proteins in 213 species: Archae - 4; Bacteria - 450; Metazoa - 1; Fungi - 48; Plants - 316; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 804.0) & (original description: Putative At5g22460, Description = Esterase/lipase/thioesterase family protein, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'niben101scf06081_256314-265394' '(at3g03420 : 301.0) Ku70-binding family protein; CONTAINS InterPro DOMAIN/s: Peptidase M76, ATP23 (InterPro:IPR019165); Has 337 Blast hits to 337 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 95; Fungi - 144; Plants - 46; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|38524 : 235.0) no description available & (reliability: 602.0) & (original description: Putative Sb06g020460, Description = Putative uncharacterized protein Sb06g020460, PFAM = PF09768)' T '35.1' 'not assigned.no ontology' 'niben101scf06081_450134-463908' '(at2g26060 : 411.0) embryo defective 1345 (emb1345); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G32990.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35864 : 364.0) no description available & (gnl|cdd|29257 : 174.0) no description available & (reliability: 822.0) & (original description: Putative CIA1, Description = Protein CIA1, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf06091_222405-238969' '(at1g80810 : 159.0) Tudor/PWWP/MBT superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1); Has 103396 Blast hits to 54411 proteins in 2510 species: Archae - 599; Bacteria - 9234; Metazoa - 41155; Fungi - 13255; Plants - 5790; Viruses - 1058; Other Eukaryotes - 32305 (source: NCBI BLink). & (gnl|cdd|36738 : 131.0) no description available & (reliability: 318.0) & (original description: Putative At1g15940, Description = Tudor/PWWP/MBT superfamily protein, PFAM = PF05278)' T '35.1' 'not assigned.no ontology' 'niben101scf06091_261153-274448' '(at4g31880 : 217.0) LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1). & (gnl|cdd|36738 : 135.0) no description available & (reliability: 398.0) & (original description: Putative At1g15940, Description = Aspartyl beta-hydroxylase N-terminal region domain-containing protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf06094_246451-251133' '(at4g15240 : 451.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT1G05280.1); Has 575 Blast hits to 564 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 136; Fungi - 162; Plants - 266; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|68226 : 327.0) no description available & (gnl|cdd|37457 : 224.0) no description available & (reliability: 902.0) & (original description: Putative At4g15240, Description = Glycosyltransferase, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben101scf06094_381632-385847' '(gnl|cdd|68226 : 287.0) no description available & (at4g15240 : 227.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT1G05280.1); Has 575 Blast hits to 564 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 136; Fungi - 162; Plants - 266; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37457 : 130.0) no description available & (reliability: 454.0) & (original description: Putative GT31C5, Description = Transferring glycosyl group transferase, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben101scf06094_381762-386435' '(at4g15240 : 369.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT1G05280.1); Has 575 Blast hits to 564 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 136; Fungi - 162; Plants - 266; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|68226 : 297.0) no description available & (gnl|cdd|37457 : 224.0) no description available & (reliability: 738.0) & (original description: Putative GT31C5, Description = Transferring glycosyl group transferase, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben101scf06113_135948-139140' '(at1g61760 : 214.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT4G05220.1); Has 824 Blast hits to 824 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 824; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 121.0) no description available & (reliability: 428.0) & (original description: Putative BnaA09g19830D, Description = BnaA09g19830D protein, PFAM = PF03168)' T '35.1' 'not assigned.no ontology' 'niben101scf06132_36349-61887' '(at1g19100 : 706.0) Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (TAIR:AT4G36280.1); Has 533 Blast hits to 518 proteins in 94 species: Archae - 0; Bacteria - 53; Metazoa - 227; Fungi - 0; Plants - 195; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|37056 : 290.0) no description available & (reliability: 1412.0) & (original description: Putative MORC6, Description = Protein MICRORCHIDIA 6, PFAM = PF13589)' T '35.1' 'not assigned.no ontology' 'niben101scf06158_138720-145924' '(at4g18930 : 213.0) RNA ligase/cyclic nucleotide phosphodiesterase family protein; CONTAINS InterPro DOMAIN/s: RNA ligase/cyclic nucleotide phosphodiesterase (InterPro:IPR009097), 2',3'-cyclic-nucleotide 3'-phosphodiesterase (InterPro:IPR012386); BEST Arabidopsis thaliana protein match is: RNA ligase/cyclic nucleotide phosphodiesterase family protein (TAIR:AT4G18940.1); Has 112 Blast hits to 112 proteins in 29 species: Archae - 3; Bacteria - 12; Metazoa - 0; Fungi - 8; Plants - 58; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|87380 : 131.0) no description available & (reliability: 426.0) & (original description: Putative At4g18930, Description = Cyclic phosphodiesterase, PFAM = PF07823)' T '35.1' 'not assigned.no ontology' 'niben101scf06186_314625-319125' '(at5g23940 : 564.0) Encodes PERMEABLE LEAVES3 (PEL3), a putative acyl-transferase. Mutation in this locus results in altered trichome phenotype (trcichomes become tangled during leaf expansion). Additional phenotype includes altered cuticle layer.; PERMEABLE LEAVES3 (PEL3); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: epidermis morphogenesis, localization, trichome morphogenesis, cutin biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT2G39980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66174 : 237.0) no description available & (o23917|hcbt2_diaca : 101.0) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1128.0) & (original description: Putative DCR, Description = BAHD acyltransferase DCR, PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'niben101scf06190_163120-177540' '(at1g15290 : 1385.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G28080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37050 : 328.0) no description available & (reliability: 2770.0) & (original description: Putative At1g15290, Description = Tetratricopeptide repeat-containing protein, PFAM = PF13424;PF13424;PF12807;PF15044)' T '35.1' 'not assigned.no ontology' 'niben101scf06207_322718-328101' '(at5g52030 : 440.0) TraB family protein; CONTAINS InterPro DOMAIN/s: Pheromone shutdown-related, TraB (InterPro:IPR002816); BEST Arabidopsis thaliana protein match is: TraB family protein (TAIR:AT1G05270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38071 : 248.0) no description available & (gnl|cdd|32100 : 128.0) no description available & (reliability: 880.0) & (original description: Putative PGSC0003DMG400014264, Description = Trab domain-containing, PFAM = PF01963)' T '35.1' 'not assigned.no ontology' 'niben101scf06218_58774-65507' '(at5g42470 : 455.0) CONTAINS InterPro DOMAIN/s: Brain/reproductive organ-expressed protein (InterPro:IPR010358); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69624 : 110.0) no description available & (reliability: 910.0) & (original description: Putative , Description = Probable magnesium transporter, PFAM = PF06113)' T '35.1' 'not assigned.no ontology' 'niben101scf06235_262085-268132' '(gnl|cdd|35600 : 214.0) no description available & (at1g18610 : 200.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G74150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q39610|dyha_chlre : 100.0) Dynein alpha chain, flagellar outer arm (DHC alpha) - Chlamydomonas reinhardtii & (reliability: 400.0) & (original description: Putative TCM_026772, Description = Galactose oxidase/kelch repeat superfamily protein, putative isoform 1, PFAM = PF13415;PF13415;PF13415;PF01344)' T '35.1' 'not assigned.no ontology' 'niben101scf06235_409536-442740' '(at1g56500 : 1403.0) haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: hydrolase activity, oxidoreductase activity, catalytic activity; INVOLVED IN: metabolic process, cell redox homeostasis; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), Low-density lipoprotein receptor, class B (YWTD) repeat (InterPro:IPR000033), Thioredoxin fold (InterPro:IPR012335), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Thioredoxin-like (InterPro:IPR017936), NHL repeat (InterPro:IPR001258), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT3G07060.1); Has 23445 Blast hits to 20574 proteins in 2565 species: Archae - 340; Bacteria - 17044; Metazoa - 1036; Fungi - 332; Plants - 721; Viruses - 3; Other Eukaryotes - 3969 (source: NCBI BLink). & (gnl|cdd|48561 : 191.0) no description available & (gnl|cdd|38125 : 163.0) no description available & (reliability: 2806.0) & (original description: Putative resA, Description = NHL repeat-containing protein, PFAM = PF01436;PF13419;PF13905)' T '35.1' 'not assigned.no ontology' 'niben101scf06235_412467-459375' '(at1g56500 : 948.0) haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: hydrolase activity, oxidoreductase activity, catalytic activity; INVOLVED IN: metabolic process, cell redox homeostasis; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), Low-density lipoprotein receptor, class B (YWTD) repeat (InterPro:IPR000033), Thioredoxin fold (InterPro:IPR012335), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Thioredoxin-like (InterPro:IPR017936), NHL repeat (InterPro:IPR001258), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT3G07060.1); Has 23445 Blast hits to 20574 proteins in 2565 species: Archae - 340; Bacteria - 17044; Metazoa - 1036; Fungi - 332; Plants - 721; Viruses - 3; Other Eukaryotes - 3969 (source: NCBI BLink). & (gnl|cdd|48561 : 190.0) no description available & (reliability: 1896.0) & (original description: Putative resA, Description = NHL repeat-containing protein 2, PFAM = PF01436;PF13905)' T '35.1' 'not assigned.no ontology' 'niben101scf06236_159522-164459' '(at1g12340 : 137.0) Cornichon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular signaling pathway; LOCATED IN: membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Cornichon (InterPro:IPR003377); BEST Arabidopsis thaliana protein match is: Cornichon family protein (TAIR:AT1G12390.1); Has 611 Blast hits to 611 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 324; Fungi - 154; Plants - 92; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|37940 : 118.0) no description available & (gnl|cdd|66954 : 84.1) no description available & (reliability: 274.0) & (original description: Putative At1g12390, Description = Protein cornichon homolog 4, PFAM = PF03311)' T '35.1' 'not assigned.no ontology' 'niben101scf06279_211097-222958' '(at1g04300 : 748.0) TRAF-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like superfamily protein (TAIR:AT5G43560.2). & (gnl|cdd|58100 : 117.0) no description available & (reliability: 1496.0) & (original description: Putative At5g43560, Description = MATH domain-containing protein At5g43560, PFAM = PF00917)' T '35.1' 'not assigned.no ontology' 'niben101scf06280_502277-510999' '(at2g32590 : 138.0) LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits to 447 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other Eukaryotes - 108 (source: NCBI BLink). & (gnl|cdd|86950 : 110.0) no description available & (gnl|cdd|37539 : 96.3) no description available & (reliability: 276.0) & (original description: Putative CAPH, Description = Condensin complex subunit 2, PFAM = PF05786)' T '35.1' 'not assigned.no ontology' 'niben101scf06305_207587-214853' '(at5g41620 : 357.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: intracellular protein transport protein USO1-related (TAIR:AT1G64180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 714.0) & (original description: Putative At5g41620, Description = Uncharacterized protein At5g41620, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf06318_282775-285816' '(at5g01300 : 221.0) PEBP (phosphatidylethanolamine-binding protein) family protein; FUNCTIONS IN: phosphatidylethanolamine binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: YbhB/YbcL (InterPro:IPR005247), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29584 : 120.0) no description available & (reliability: 442.0) & (original description: Putative MTR_4g017680, Description = Raf kinase inhibitor-like protein, YbhB/YbcL family protein, PFAM = PF01161)' T '35.1' 'not assigned.no ontology' 'niben101scf06326_1-2237' '(at5g25280 : 91.7) serine-rich protein-related; BEST Arabidopsis thaliana protein match is: serine-rich protein-related (TAIR:AT5G11090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'niben101scf06344_507735-510226' '(at3g49190 : 113.0) O-acyltransferase (WSD1-like) family protein; CONTAINS InterPro DOMAIN/s: O-acyltransferase, WSD1, C-terminal (InterPro:IPR009721), O-acyltransferase, WSD1, N-terminal (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT3G49210.1); Has 1419 Blast hits to 1410 proteins in 214 species: Archae - 2; Bacteria - 1155; Metazoa - 6; Fungi - 2; Plants - 225; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative , Description = O-acyltransferase WSD1, PFAM = PF03007)' T '35.1' 'not assigned.no ontology' 'niben101scf06347_210645-215523' '(at2g26680 : 407.0) CONTAINS InterPro DOMAIN/s: Methyltransferase FkbM (InterPro:IPR006342); Has 1073 Blast hits to 1073 proteins in 243 species: Archae - 45; Bacteria - 509; Metazoa - 0; Fungi - 4; Plants - 60; Viruses - 4; Other Eukaryotes - 451 (source: NCBI BLink). & (reliability: 814.0) & (original description: Putative At2g26680, Description = Expressed protein, PFAM = PF05050)' T '35.1' 'not assigned.no ontology' 'niben101scf06348_35784-50631' '(at3g61080 : 468.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fructosamine/Ketosamine-3-kinase (InterPro:IPR016477), Protein kinase-like domain (InterPro:IPR011009); Has 2101 Blast hits to 2101 proteins in 833 species: Archae - 8; Bacteria - 1432; Metazoa - 140; Fungi - 164; Plants - 42; Viruses - 0; Other Eukaryotes - 315 (source: NCBI BLink). & (gnl|cdd|38231 : 413.0) no description available & (gnl|cdd|32819 : 248.0) no description available & (reliability: 936.0) & (original description: Putative aph, Description = Fructosamine/Ketosamine-3-kinase, PFAM = PF03881)' T '35.1' 'not assigned.no ontology' 'niben101scf06357_39530-44363' '(at2g17120 : 281.0) lysm domain GPI-anchored protein 2 precursor (LYM2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell wall macromolecule catabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Peptidoglycan-binding Lysin subgroup (InterPro:IPR002482); BEST Arabidopsis thaliana protein match is: lysm domain GPI-anchored protein 1 precursor (TAIR:AT1G21880.2); Has 636 Blast hits to 591 proteins in 145 species: Archae - 0; Bacteria - 285; Metazoa - 0; Fungi - 0; Plants - 336; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 562.0) & (original description: Putative LYM2, Description = LysM domain-containing GPI-anchored protein 2, PFAM = PF01476;PF01476)' T '35.1' 'not assigned.no ontology' 'niben101scf06369_468484-471623' '(at4g11570 : 474.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT3G10970.1); Has 9886 Blast hits to 9886 proteins in 1971 species: Archae - 106; Bacteria - 8631; Metazoa - 63; Fungi - 26; Plants - 330; Viruses - 0; Other Eukaryotes - 730 (source: NCBI BLink). & (gnl|cdd|38125 : 148.0) no description available & (gnl|cdd|30982 : 115.0) no description available & (reliability: 948.0) & (original description: Putative isr, Description = Genetic modifier, PFAM = PF13419)' T '35.1' 'not assigned.no ontology' 'niben101scf06388_66969-73114' '(at3g56840 : 503.0) FAD-dependent oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076); Has 4748 Blast hits to 4741 proteins in 1463 species: Archae - 76; Bacteria - 3210; Metazoa - 112; Fungi - 136; Plants - 47; Viruses - 1; Other Eukaryotes - 1166 (source: NCBI BLink). & (gnl|cdd|37876 : 377.0) no description available & (gnl|cdd|30924 : 285.0) no description available & (reliability: 1006.0) & (original description: Putative lhgO, Description = FAD-dependent oxidoreductase, PFAM = PF01266)' T '35.1' 'not assigned.no ontology' 'niben101scf06390_51948-56967' '(at2g36290 : 355.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G74300.1); Has 970 Blast hits to 968 proteins in 224 species: Archae - 20; Bacteria - 476; Metazoa - 0; Fungi - 77; Plants - 313; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (reliability: 710.0) & (original description: Putative At2g36290, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf06394_396790-400849' '(at2g01190 : 127.0) Octicosapeptide/Phox/Bem1p family protein; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT3G18230.1); Has 5347 Blast hits to 4615 proteins in 344 species: Archae - 4; Bacteria - 100; Metazoa - 2308; Fungi - 1293; Plants - 931; Viruses - 29; Other Eukaryotes - 682 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative At2g01190, Description = Octicosapeptide/Phox/Bem1p family protein, putative, PFAM = PF00564)' T '35.1' 'not assigned.no ontology' 'niben101scf06423_404350-412020' '(at5g47760 : 407.0) serine/threonine protein kinase; 2-phosphoglycolate phosphatase 2 (PGLP2); FUNCTIONS IN: protein serine/threonine kinase activity, phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIA (InterPro:IPR006357), 2-phosphoglycolate phosphatase, eukaryotic (InterPro:IPR006349); BEST Arabidopsis thaliana protein match is: 2-phosphoglycolate phosphatase 1 (TAIR:AT5G36700.4); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38093 : 371.0) no description available & (gnl|cdd|30992 : 212.0) no description available & (reliability: 814.0) & (original description: Putative PGLP2, Description = Phosphoglycolate phosphatase 2, PFAM = PF13344;PF13242)' T '35.1' 'not assigned.no ontology' 'niben101scf06432_30177-50813' '(at5g27760 : 104.0) Hypoxia-responsive family protein; CONTAINS InterPro DOMAIN/s: Hypoxia induced protein, conserved region (InterPro:IPR007667); BEST Arabidopsis thaliana protein match is: Hypoxia-responsive family protein (TAIR:AT3G05550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative HR2, Description = Hypoia-responsive family protein 2, PFAM = PF04588)' T '35.1' 'not assigned.no ontology' 'niben101scf06439_95630-98740' '(at3g18460 : 113.0) PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT3G18450.1); Has 685 Blast hits to 684 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 90; Fungi - 48; Plants - 538; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|86720 : 101.0) no description available & (reliability: 226.0) & (original description: Putative PGPS/D12, Description = PGPS/D12, PFAM = PF04749)' T '35.1' 'not assigned.no ontology' 'niben101scf06461_589076-623902' '(at2g07360 : 1587.0) SH3 domain-containing protein; FUNCTIONS IN: binding; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Src homology-3 domain (InterPro:IPR001452), Armadillo-type fold (InterPro:IPR016024). & (reliability: 3174.0) & (original description: Putative SRC, Description = Src homology 3 domain containing protein, PFAM = PF14604)' T '35.1' 'not assigned.no ontology' 'niben101scf06467_350466-382203' '(at1g27752 : 684.0) Ubiquitin system component Cue protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39701 : 315.0) no description available & (reliability: 1368.0) & (original description: Putative BnaA09g40770D, Description = BnaA09g40770D protein, PFAM = PF02845;PF07744)' T '35.1' 'not assigned.no ontology' 'niben101scf06467_381991-394365' '(at1g27760 : 531.0) Encodes a protein with similarity to human interferon-related developmental regulator (IFRD)that is involved in salt tolerance. Loss of function mutations are hypersensitive to salt stress and have reduced fertility. SAT32 is found in the cytoplasm but appears to translocate to the nucleus when plants are subject to salt stress.; SALT-TOLERANCE 32 (SAT32); FUNCTIONS IN: binding; INVOLVED IN: response to salt stress; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Interferon-related developmental regulator, N-terminal (InterPro:IPR007701), Interferon-related developmental regulator, C-terminal (InterPro:IPR006921), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68573 : 198.0) no description available & (gnl|cdd|38053 : 136.0) no description available & (reliability: 1062.0) & (original description: Putative SAT32, Description = Protein salt tolerance 32, PFAM = PF04836;PF05004)' T '35.1' 'not assigned.no ontology' 'niben101scf06509_418135-425181' '(at2g40570 : 649.0) initiator tRNA phosphoribosyl transferase family protein; FUNCTIONS IN: transferase activity, transferring pentosyl groups; INVOLVED IN: regulation of translation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiator tRNA phosphoribosyl transferase (InterPro:IPR007306), tRNA A64-2'-O-ribosylphosphate transferase, RIT1 (InterPro:IPR016519); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37845 : 465.0) no description available & (gnl|cdd|67779 : 439.0) no description available & (reliability: 1298.0) & (original description: Putative Os06g0555500, Description = Os06g0555500 protein, PFAM = PF04179;PF17184)' T '35.1' 'not assigned.no ontology' 'niben101scf06542_2560-4218' '(gnl|cdd|66174 : 111.0) no description available & (at4g15390 : 105.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 2282 Blast hits to 2273 proteins in 132 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 35; Plants - 2239; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative CV86, Description = Putative spermidine hydroxycinnamoyl transferase, PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'niben101scf06542_3217-5924' '(at3g26040 : 97.4) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 2415 Blast hits to 2403 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 2353; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|66174 : 80.8) no description available & (reliability: 194.8) & (original description: Putative CV86, Description = Putative acetyl-CoA-benzylalcohol acetyltransferase-like, PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'niben101scf06545_160446-165606' '(at2g02880 : 307.0) mucin-related; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62270.1); Has 128 Blast hits to 128 proteins in 36 species: Archae - 0; Bacteria - 3; Metazoa - 3; Fungi - 6; Plants - 91; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 614.0) & (original description: Putative MTR_5g039440, Description = Mucin-like protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf06552_52290-54995' '(at5g19820 : 86.3) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'niben101scf06560_118316-123775' '(at5g38900 : 303.0) Thioredoxin superfamily protein; FUNCTIONS IN: protein disulfide oxidoreductase activity; INVOLVED IN: defense response to fungus, incompatible interaction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DSBA oxidoreductase (InterPro:IPR001853), Thioredoxin-like fold (InterPro:IPR012336); Has 2126 Blast hits to 2126 proteins in 739 species: Archae - 17; Bacteria - 1478; Metazoa - 14; Fungi - 129; Plants - 62; Viruses - 0; Other Eukaryotes - 426 (source: NCBI BLink). & (gnl|cdd|48573 : 228.0) no description available & (reliability: 606.0) & (original description: Putative TCM_018984, Description = DSBA oxidoreductase family protein isoform 1, PFAM = PF01323)' T '35.1' 'not assigned.no ontology' 'niben101scf06569_5346-90853' '(gnl|cdd|28751 : 221.0) no description available & (at4g39730 : 209.0) Lipase/lipooxygenase, PLAT/LH2 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976); BEST Arabidopsis thaliana protein match is: Lipase/lipooxygenase, PLAT/LH2 family protein (TAIR:AT2G22170.1); Has 247 Blast hits to 225 proteins in 46 species: Archae - 0; Bacteria - 3; Metazoa - 94; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 418.0) & (original description: Putative TinI, Description = TMV-induced protein I, PFAM = PF01477)' T '35.1' 'not assigned.no ontology' 'niben101scf06570_476748-479527' '(at1g28280 : 147.0) VQ motif-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT2G33780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative VQ4, Description = VQ motif-containing protein 4, PFAM = PF05678)' T '35.1' 'not assigned.no ontology' 'niben101scf06570_530128-538490' '(at4g18905 : 483.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G18900.1). & (gnl|cdd|35491 : 432.0) no description available & (gnl|cdd|29257 : 108.0) no description available & (reliability: 966.0) & (original description: Putative WDR1, Description = WD40 repeat-like superfamily protein, PFAM = PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf06588_347499-356403' '(at1g61150 : 332.0) LisH and RanBPM domains containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein, CRA domain (InterPro:IPR019589), CTLH, C-terminal LisH motif (InterPro:IPR006595), Ran binding protein-like, CRA domain (InterPro:IPR013144); BEST Arabidopsis thaliana protein match is: LisH and RanBPM domains containing protein (TAIR:AT4G09300.1); Has 726 Blast hits to 711 proteins in 198 species: Archae - 0; Bacteria - 50; Metazoa - 282; Fungi - 123; Plants - 213; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|37870 : 240.0) no description available & (reliability: 664.0) & (original description: Putative At4g09300, Description = Putative uncharacterized protein AT4g09300, PFAM = PF10607;PF08513)' T '35.1' 'not assigned.no ontology' 'niben101scf06613_468891-483698' '(at4g08630 : 291.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48860.2); Has 1487 Blast hits to 747 proteins in 184 species: Archae - 0; Bacteria - 56; Metazoa - 305; Fungi - 197; Plants - 180; Viruses - 3; Other Eukaryotes - 746 (source: NCBI BLink). & (reliability: 544.0) & (original description: Putative RRP1, Description = Ripening-regulated protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf06641_106630-113246' '(at4g39470 : 287.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Protein prenylyltransferase superfamily protein (TAIR:AT3G18420.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 574.0) & (original description: Putative BnaA03g17190D, Description = BnaA03g17190D protein, PFAM = PF14559)' T '35.1' 'not assigned.no ontology' 'niben101scf06661_71446-73961' '(at2g44340 : 83.2) VQ motif-containing protein; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT3G60090.1); Has 74358 Blast hits to 8061 proteins in 139 species: Archae - 42; Bacteria - 73; Metazoa - 488; Fungi - 2072; Plants - 106; Viruses - 2; Other Eukaryotes - 71575 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative VQ18, Description = AtVQ18, PFAM = PF05678)' T '35.1' 'not assigned.no ontology' 'niben101scf06668_869403-873772' '(at5g65280 : 159.0) Encodes a protein with reported similarity to GCR2 a putative G protein coupled receptor thought to be an ABA receptor. Loss of function mutations in GCL1 show no ABA response defects based on assays of seed germination and seedling development.GCL1 also has similarity to LANCL1 and LANCL2, human homologs of bacterial lanthionine synthetase.; GCR2-like 1 (GCL1); FUNCTIONS IN: catalytic activity; INVOLVED IN: response to salt stress; LOCATED IN: extrinsic to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LanC-like protein, eukaryotic (InterPro:IPR020464), Six-hairpin glycosidase-like (InterPro:IPR008928), Lanthionine synthetase C-like (InterPro:IPR007822); BEST Arabidopsis thaliana protein match is: G protein coupled receptor (TAIR:AT1G52920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37998 : 99.3) no description available & (reliability: 318.0) & (original description: Putative GCL1, Description = G protein coupled receptor, PFAM = PF05147)' T '35.1' 'not assigned.no ontology' 'niben101scf06671_284923-302271' '(at1g51160 : 297.0) SNARE-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, ER to Golgi vesicle-mediated transport; LOCATED IN: cis-Golgi network; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sybindin-like protein (InterPro:IPR007233), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT5G02280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67705 : 173.0) no description available & (gnl|cdd|38578 : 170.0) no description available & (reliability: 594.0) & (original description: Putative BET5, Description = Component of TRAPP complex, PFAM = PF04099)' T '35.1' 'not assigned.no ontology' 'niben101scf06672_78590-85096' '(at3g27640 : 484.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1); Has 36714 Blast hits to 22017 proteins in 645 species: Archae - 42; Bacteria - 5151; Metazoa - 14249; Fungi - 8186; Plants - 4562; Viruses - 0; Other Eukaryotes - 4524 (source: NCBI BLink). & (gnl|cdd|35542 : 308.0) no description available & (gnl|cdd|29257 : 116.0) no description available & (reliability: 968.0) & (original description: Putative Sb01g011110, Description = Putative uncharacterized protein Sb01g011110, PFAM = PF00400;PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf06678_37508-49586' '(at2g11000 : 295.0) Encodes a non-functional Arabidopsis homolog of the yeast protein MAK10, a component of the N-terminal acetyltransferase complex C. Mutant plants have normal photosynthesis as well as growth rates and pigmentation comparable to wild type.; MAK10 homologue (MAK10); FUNCTIONS IN: acetyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mak10 subunit, NatC N(alpha)-terminal acetyltransferase (InterPro:IPR007244); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37554 : 142.0) no description available & (reliability: 590.0) & (original description: Putative glysoja_022400, Description = N-alpha-acetyltransferase 35, NatC auxiliary subunit, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf06684_356466-362457' '(at5g52910 : 364.0) homolog of Drosophila timeless; TIMELESS (ATIM); CONTAINS InterPro DOMAIN/s: Timeless C-terminal (InterPro:IPR007725), Timeless protein (InterPro:IPR006906); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37185 : 214.0) no description available & (gnl|cdd|68396 : 91.1) no description available & (reliability: 728.0) & (original description: Putative ATIM, Description = Putative glucose-6-phosphate 1-epimerase, PFAM = PF04821)' T '35.1' 'not assigned.no ontology' 'niben101scf06726_170925-174187' '(gnl|cdd|66831 : 237.0) no description available & (at1g49320 : 210.0) Encodes USPL1, a BURP domain protein targeted to the protein storage vacuoles. Overexpression of USPL1 affects seed development, protein storage vacuoles and lipid vesicles morphology and function.; unknown seed protein like 1 (USPL1); CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: BURP domain-containing protein (TAIR:AT5G25610.1); Has 493 Blast hits to 491 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 493; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 420.0) & (original description: Putative bdc1, Description = Dehydration-responsive protein RD22, PFAM = PF03181)' T '35.1' 'not assigned.no ontology' 'niben101scf06734_78736-83621' '(at1g70280 : 526.0) NHL domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NHL repeat (InterPro:IPR001258), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT1G23880.1); Has 7202 Blast hits to 4120 proteins in 426 species: Archae - 63; Bacteria - 1459; Metazoa - 1476; Fungi - 468; Plants - 264; Viruses - 2; Other Eukaryotes - 3470 (source: NCBI BLink). & (reliability: 1052.0) & (original description: Putative BnaA07g23870D, Description = BnaA07g23870D protein, PFAM = PF01436)' T '35.1' 'not assigned.no ontology' 'niben101scf06734_87251-103122' '(at1g23890 : 238.0) NHL domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NHL repeat. subgroup (InterPro:IPR013017), NHL repeat (InterPro:IPR001258), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT1G23880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 476.0) & (original description: Putative At1g23890, Description = At1g23890/T23E23_13, PFAM = PF01436)' T '35.1' 'not assigned.no ontology' 'niben101scf06750_13367-17255' '(at1g69800 : 493.0) Cystathionine beta-synthase (CBS) protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: SNF1-related protein kinase regulatory subunit gamma 1 (TAIR:AT3G48530.1); Has 884 Blast hits to 801 proteins in 238 species: Archae - 117; Bacteria - 172; Metazoa - 187; Fungi - 63; Plants - 180; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (gnl|cdd|36975 : 199.0) no description available & (gnl|cdd|73140 : 125.0) no description available & (reliability: 986.0) & (original description: Putative CBSCBS2, Description = SNF1-related protein kinase regulatory subunit gamma-1-like, PFAM = PF00571;PF00571)' T '35.1' 'not assigned.no ontology' 'niben101scf06761_381481-384059' '(at5g25280 : 105.0) serine-rich protein-related; BEST Arabidopsis thaliana protein match is: serine-rich protein-related (TAIR:AT5G11090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'niben101scf06761_381502-384140' '(at5g25280 : 123.0) serine-rich protein-related; BEST Arabidopsis thaliana protein match is: serine-rich protein-related (TAIR:AT5G11090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative , Description = Dual specificity tyrosine-phosphorylation-regulated kinase-like, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf06806_61139-67871' '(at2g43970 : 290.0) RNA-binding protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: ribonucleoprotein complex, nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344); BEST Arabidopsis thaliana protein match is: RNA-binding protein (TAIR:AT3G19090.1); Has 5536 Blast hits to 4258 proteins in 377 species: Archae - 4; Bacteria - 395; Metazoa - 1833; Fungi - 479; Plants - 433; Viruses - 20; Other Eukaryotes - 2372 (source: NCBI BLink). & (gnl|cdd|37066 : 260.0) no description available & (gnl|cdd|47984 : 106.0) no description available & (reliability: 580.0) & (original description: Putative Os08g0542900, Description = Os08g0542900 protein, PFAM = PF05383)' T '35.1' 'not assigned.no ontology' 'niben101scf06823_273541-278176' '(at2g14880 : 139.0) SWIB/MDM2 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121), SWIB domain (InterPro:IPR019835); BEST Arabidopsis thaliana protein match is: SWIB/MDM2 domain superfamily protein (TAIR:AT4G34290.1); Has 1208 Blast hits to 1119 proteins in 254 species: Archae - 0; Bacteria - 214; Metazoa - 140; Fungi - 207; Plants - 389; Viruses - 11; Other Eukaryotes - 247 (source: NCBI BLink). & (gnl|cdd|37157 : 108.0) no description available & (gnl|cdd|85905 : 96.8) no description available & (reliability: 278.0) & (original description: Putative PGSC0003DMG400023191, Description = Wollemia nobilis Ref_Wollemi_Transcript_22316_713 transcribed RNA sequence, PFAM = PF02201)' T '35.1' 'not assigned.no ontology' 'niben101scf06837_30207-33507' '(at3g19460 : 202.0) Reticulon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT2G15280.1); Has 985 Blast hits to 985 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 550; Fungi - 0; Plants - 426; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|37003 : 173.0) no description available & (gnl|cdd|66169 : 170.0) no description available & (reliability: 404.0) & (original description: Putative RTNLB11, Description = Reticulon-like protein B11, PFAM = PF02453)' T '35.1' 'not assigned.no ontology' 'niben101scf06848_804683-816511' '(at1g29320 : 457.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 10050 Blast hits to 5411 proteins in 439 species: Archae - 25; Bacteria - 1235; Metazoa - 2837; Fungi - 1519; Plants - 647; Viruses - 46; Other Eukaryotes - 3741 (source: NCBI BLink). & (gnl|cdd|39084 : 308.0) no description available & (reliability: 914.0) & (original description: Putative WDR1, Description = WD repeat-containing protein 74-like isoform, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf06851_67435-73599' '(at1g16445 : 290.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Putative rRNA methylase (InterPro:IPR010719); Has 1208 Blast hits to 1208 proteins in 621 species: Archae - 2; Bacteria - 1139; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|87189 : 155.0) no description available & (reliability: 580.0) & (original description: Putative wcw_0798, Description = Putative rRNA methylase, PFAM = PF06962)' T '35.1' 'not assigned.no ontology' 'niben101scf06898_237844-254429' '(at1g30540 : 424.0) Actin-like ATPase superfamily protein; CONTAINS InterPro DOMAIN/s: ATPase, BadF/BadG/BcrA/BcrD type (InterPro:IPR002731); Has 1833 Blast hits to 1833 proteins in 714 species: Archae - 64; Bacteria - 1392; Metazoa - 117; Fungi - 35; Plants - 122; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (gnl|cdd|37005 : 310.0) no description available & (gnl|cdd|85732 : 167.0) no description available & (reliability: 848.0) & (original description: Putative Os07g0147700, Description = Os07g0147700 protein, PFAM = PF01869)' T '35.1' 'not assigned.no ontology' 'niben101scf06910_466181-471145' '(gnl|cdd|37747 : 203.0) no description available & (at5g05990 : 201.0) Mitochondrial glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: Mitochondrial glycoprotein family protein (TAIR:AT3G55605.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85957 : 96.7) no description available & (reliability: 402.0) & (original description: Putative BnaC03g00540D, Description = BnaC03g00540D protein, PFAM = PF02330)' T '35.1' 'not assigned.no ontology' 'niben101scf06912_20988-42463' '(at5g13560 : 508.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37370.1); Has 12055 Blast hits to 8846 proteins in 811 species: Archae - 217; Bacteria - 1046; Metazoa - 6104; Fungi - 1115; Plants - 528; Viruses - 14; Other Eukaryotes - 3031 (source: NCBI BLink). & (reliability: 1016.0) & (original description: Putative BnaA10g19800D, Description = BnaA10g19800D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf06949_37882-41889' '(at3g03990 : 445.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G37470.1); Has 7052 Blast hits to 7050 proteins in 1427 species: Archae - 69; Bacteria - 5615; Metazoa - 94; Fungi - 57; Plants - 279; Viruses - 0; Other Eukaryotes - 938 (source: NCBI BLink). & (gnl|cdd|30941 : 86.3) no description available & (reliability: 890.0) & (original description: Putative DAD2, Description = Probable strigolactone esterase DAD2, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf06949_317048-331834' '(at1g27760 : 543.0) Encodes a protein with similarity to human interferon-related developmental regulator (IFRD)that is involved in salt tolerance. Loss of function mutations are hypersensitive to salt stress and have reduced fertility. SAT32 is found in the cytoplasm but appears to translocate to the nucleus when plants are subject to salt stress.; SALT-TOLERANCE 32 (SAT32); FUNCTIONS IN: binding; INVOLVED IN: response to salt stress; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Interferon-related developmental regulator, N-terminal (InterPro:IPR007701), Interferon-related developmental regulator, C-terminal (InterPro:IPR006921), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68573 : 199.0) no description available & (gnl|cdd|38053 : 135.0) no description available & (reliability: 1086.0) & (original description: Putative SAT32, Description = Protein salt tolerance 32, PFAM = PF04836;PF05004)' T '35.1' 'not assigned.no ontology' 'niben101scf06949_331835-344168' '(at1g27752 : 656.0) Ubiquitin system component Cue protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39701 : 305.0) no description available & (reliability: 1312.0) & (original description: Putative BnaA09g40770D, Description = BnaA09g40770D protein, PFAM = PF02845)' T '35.1' 'not assigned.no ontology' 'niben101scf06954_431474-443282' '(at1g04910 : 822.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G22460.1); Has 861 Blast hits to 824 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 861; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 374.0) no description available & (reliability: 1644.0) & (original description: Putative axi 1, Description = GDP-fucose protein O-fucosyltransferase, PFAM = PF10250)' T '35.1' 'not assigned.no ontology' 'niben101scf06966_23383-31755' '(at5g10910 : 399.0) mraW methylase family protein; FUNCTIONS IN: methyltransferase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosyl-L-methionine-dependent methyltransferase, MraW (InterPro:IPR002903); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|30623 : 303.0) no description available & (gnl|cdd|37993 : 302.0) no description available & (reliability: 798.0) & (original description: Putative rsmH, Description = Ribosomal RNA small subunit methyltransferase H, PFAM = PF01795;PF01795)' T '35.1' 'not assigned.no ontology' 'niben101scf06974_95918-101867' '(at1g70280 : 467.0) NHL domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NHL repeat (InterPro:IPR001258), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT1G23880.1); Has 7202 Blast hits to 4120 proteins in 426 species: Archae - 63; Bacteria - 1459; Metazoa - 1476; Fungi - 468; Plants - 264; Viruses - 2; Other Eukaryotes - 3470 (source: NCBI BLink). & (reliability: 934.0) & (original description: Putative pco086600, Description = NHL repeat-containing protein, PFAM = PF01436)' T '35.1' 'not assigned.no ontology' 'niben101scf06976_112475-116923' '(at1g15870 : 216.0) Mitochondrial glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrial matrix; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: Mitochondrial glycoprotein family protein (TAIR:AT1G80720.1); Has 432 Blast hits to 432 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 119; Plants - 216; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|37747 : 169.0) no description available & (gnl|cdd|85957 : 81.2) no description available & (reliability: 432.0) & (original description: Putative BnaA06g10550D, Description = BnaA06g10550D protein, PFAM = PF02330)' T '35.1' 'not assigned.no ontology' 'niben101scf06976_305680-311700' '(at2g25110 : 320.0) Encodes an endoplasmic reticulum protein SDF2 (stromal-derived factor-2). Forms a complex SDF2-ERdj3B-BiP that is required for the proper accumulation of the surface-exposed leucine-rich repeat receptor kinases EFR. EFR is involved in PAMP (pathogen associated molecular patterns) triggered immunity.; stromal cell-derived factor 2-like protein precursor (SDF2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response to bacterium, defense response to fungus, PAMP-induced immunity; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: MIR (InterPro:IPR003608), MIR motif (InterPro:IPR016093); Has 1035 Blast hits to 992 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 386; Fungi - 512; Plants - 64; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|38568 : 251.0) no description available & (gnl|cdd|32111 : 114.0) no description available & (reliability: 640.0) & (original description: Putative SDF2, Description = Stromal cell-derived factor 2-like protein, PFAM = PF02815)' T '35.1' 'not assigned.no ontology' 'niben101scf06976_350327-366106' '(at1g80810 : 164.0) Tudor/PWWP/MBT superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1); Has 103396 Blast hits to 54411 proteins in 2510 species: Archae - 599; Bacteria - 9234; Metazoa - 41155; Fungi - 13255; Plants - 5790; Viruses - 1058; Other Eukaryotes - 32305 (source: NCBI BLink). & (gnl|cdd|36738 : 132.0) no description available & (reliability: 328.0) & (original description: Putative At1g15940, Description = Putative ovule protein, PFAM = PF05278)' T '35.1' 'not assigned.no ontology' 'niben101scf06986_189328-196185' '(at3g27640 : 470.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1); Has 36714 Blast hits to 22017 proteins in 645 species: Archae - 42; Bacteria - 5151; Metazoa - 14249; Fungi - 8186; Plants - 4562; Viruses - 0; Other Eukaryotes - 4524 (source: NCBI BLink). & (gnl|cdd|35542 : 303.0) no description available & (gnl|cdd|29257 : 124.0) no description available & (reliability: 940.0) & (original description: Putative BnaA09g02090D, Description = BnaA09g02090D protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf06999_834-7242' '(at2g36840 : 541.0) ACT-like superfamily protein; FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain-containing protein (TAIR:AT2G39570.1); Has 798 Blast hits to 670 proteins in 149 species: Archae - 0; Bacteria - 272; Metazoa - 0; Fungi - 7; Plants - 430; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). & (gnl|cdd|80426 : 126.0) no description available & (reliability: 1082.0) & (original description: Putative ACR10, Description = ACT domain-containing protein ACR10, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf07008_62080-73462' '(at1g15240 : 837.0) Phox-associated domain;Phox-like;Sorting nexin, C-terminal; CONTAINS InterPro DOMAIN/s: PX-associated, sorting nexin 13 (InterPro:IPR013996), Sorting nexin, C-terminal (InterPro:IPR013937), Phox-like (InterPro:IPR001683), Phox-associated domain (InterPro:IPR003114); BEST Arabidopsis thaliana protein match is: Phox-associated domain;Phox-like;Sorting nexin, C-terminal (TAIR:AT2G15900.1). & (reliability: 1674.0) & (original description: Putative BnaC08g38980D, Description = BnaC08g38980D protein, PFAM = PF08628;PF02194;PF00787)' T '35.1' 'not assigned.no ontology' 'niben101scf07020_45126-54130' '(at3g09850 : 358.0) D111/G-patch domain-containing protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: D111/G-patch (InterPro:IPR000467); BEST Arabidopsis thaliana protein match is: GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain (TAIR:AT1G17070.1); Has 4043 Blast hits to 2784 proteins in 353 species: Archae - 19; Bacteria - 864; Metazoa - 1783; Fungi - 478; Plants - 347; Viruses - 9; Other Eukaryotes - 543 (source: NCBI BLink). & (gnl|cdd|37395 : 140.0) no description available & (reliability: 716.0) & (original description: Putative BnaA05g28700D, Description = BnaA05g28700D protein, PFAM = PF01585;PF01585;PF01424)' T '35.1' 'not assigned.no ontology' 'niben101scf07034_88552-104861' '(at3g51050 : 1122.0) FG-GAP repeat-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell-matrix adhesion; LOCATED IN: integrin complex, integral to membrane, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 99 Blast hits to 94 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 2244.0) & (original description: Putative At3g51050, Description = FG-GAP repeat-containing protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf07049_30247-41647' '(at3g60260 : 437.0) ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT2G44770.1); Has 836 Blast hits to 836 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 495; Fungi - 36; Plants - 182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|38208 : 294.0) no description available & (gnl|cdd|68305 : 225.0) no description available & (reliability: 874.0) & (original description: Putative , Description = ELMO/CED-12 family protein, PFAM = PF04727)' T '35.1' 'not assigned.no ontology' 'niben101scf07054_176920-187618' '(at1g31410 : 527.0) putrescine-binding periplasmic protein-related; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial periplasmic spermidine/putrescine-binding protein (InterPro:IPR001188), Bacterial extracellular solute-binding, family 1 (InterPro:IPR006059); Has 4685 Blast hits to 4685 proteins in 1552 species: Archae - 5; Bacteria - 4396; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 247 (source: NCBI BLink). & (gnl|cdd|31031 : 135.0) no description available & (reliability: 1054.0) & (original description: Putative At1g31410, Description = At1g31410, PFAM = PF13343)' T '35.1' 'not assigned.no ontology' 'niben101scf07070_111902-125870' '(at3g01380 : 1322.0) transferases;sulfuric ester hydrolases;catalytics;transferases; FUNCTIONS IN: sulfuric ester hydrolase activity, transferase activity, catalytic activity; INVOLVED IN: GPI anchor biosynthetic process, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GPI ethanolamine phosphate transferase 1, C-terminal (InterPro:IPR017852), Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), GPI ethanolamine phosphate transferase 1 (InterPro:IPR007070), Alkaline-phosphatase-like, core domain (InterPro:IPR017850), Sulfatase (InterPro:IPR000917); Has 1139 Blast hits to 1068 proteins in 222 species: Archae - 0; Bacteria - 85; Metazoa - 475; Fungi - 399; Plants - 79; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (gnl|cdd|37335 : 825.0) no description available & (gnl|cdd|86764 : 295.0) no description available & (reliability: 2644.0) & (original description: Putative At3g01380, Description = Sulfatase and phosphatidylinositolglycan class N domain-containing protein, PFAM = PF04987;PF01663)' T '35.1' 'not assigned.no ontology' 'niben101scf07070_137724-142963' '(at5g14910 : 116.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative BnaC02g05810D, Description = BnaC02g05810D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf07086_148745-170238' '(gnl|cdd|69288 : 266.0) no description available & (at3g05500 : 221.0) Rubber elongation factor protein (REF); INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rubber elongation factor (InterPro:IPR008802); BEST Arabidopsis thaliana protein match is: Rubber elongation factor protein (REF) (TAIR:AT2G47780.1); Has 129 Blast hits to 129 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q9fra7|y5940_orysa : 169.0) Putative REF/SRPP-like protein Os05g0151300 - Oryza sativa (Rice) & (reliability: 442.0) & (original description: Putative SRP, Description = Stress-related protein, PFAM = PF05755)' T '35.1' 'not assigned.no ontology' 'niben101scf07086_150130-152627' '(gnl|cdd|69288 : 158.0) no description available & (at3g05500 : 138.0) Rubber elongation factor protein (REF); INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rubber elongation factor (InterPro:IPR008802); BEST Arabidopsis thaliana protein match is: Rubber elongation factor protein (REF) (TAIR:AT2G47780.1); Has 129 Blast hits to 129 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q9fra7|y5940_orysa : 109.0) Putative REF/SRPP-like protein Os05g0151300 - Oryza sativa (Rice) & (reliability: 276.0) & (original description: Putative SRP, Description = Rubber elongation factor, PFAM = PF05755)' T '35.1' 'not assigned.no ontology' 'niben101scf07103_52879-55619' '(at1g12650 : 155.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 (InterPro:IPR009292); Has 700 Blast hits to 631 proteins in 192 species: Archae - 0; Bacteria - 32; Metazoa - 138; Fungi - 168; Plants - 60; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). & (gnl|cdd|38400 : 105.0) no description available & (gnl|cdd|87021 : 92.7) no description available & (reliability: 310.0) & (original description: Putative Os09g0525200, Description = Os09g0525200 protein, PFAM = PF06102)' T '35.1' 'not assigned.no ontology' 'niben101scf07121_669015-673083' '(at3g12050 : 474.0) Aha1 domain-containing protein; FUNCTIONS IN: ATPase activator activity, chaperone binding; INVOLVED IN: response to stress; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Activator of Hsp90 ATPase, N-terminal (InterPro:IPR015310), Activator of Hsp90 ATPase homologue 1-like (InterPro:IPR013538); Has 501 Blast hits to 499 proteins in 203 species: Archae - 0; Bacteria - 24; Metazoa - 214; Fungi - 142; Plants - 65; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|38147 : 259.0) no description available & (gnl|cdd|87842 : 113.0) no description available & (reliability: 948.0) & (original description: Putative Os08g0464000, Description = Os08g0464000 protein, PFAM = PF08327;PF09229)' T '35.1' 'not assigned.no ontology' 'niben101scf07163_103508-108613' '(at1g50590 : 392.0) RmlC-like cupins superfamily protein; CONTAINS InterPro DOMAIN/s: Pirin, C-terminal (InterPro:IPR008778), Pirin (InterPro:IPR012093), Cupin, RmlC-type (InterPro:IPR011051), Pirin, N-terminal (InterPro:IPR003829); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT2G43120.1); Has 7420 Blast hits to 7420 proteins in 1472 species: Archae - 66; Bacteria - 4684; Metazoa - 72; Fungi - 219; Plants - 125; Viruses - 0; Other Eukaryotes - 2254 (source: NCBI BLink). & (gnl|cdd|31927 : 222.0) no description available & (reliability: 784.0) & (original description: Putative yhhW, Description = Quercetin 2,3-dioxygenase, PFAM = PF05726;PF02678)' T '35.1' 'not assigned.no ontology' 'niben101scf07165_16599-20166' '(at1g73480 : 128.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G18360.1); Has 6390 Blast hits to 6380 proteins in 1730 species: Archae - 36; Bacteria - 4672; Metazoa - 140; Fungi - 153; Plants - 452; Viruses - 63; Other Eukaryotes - 874 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative CSE16, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'niben101scf07165_17289-23300' '(at1g73480 : 489.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G18360.1); Has 6390 Blast hits to 6380 proteins in 1730 species: Archae - 36; Bacteria - 4672; Metazoa - 140; Fungi - 153; Plants - 452; Viruses - 63; Other Eukaryotes - 874 (source: NCBI BLink). & (gnl|cdd|36668 : 331.0) no description available & (gnl|cdd|32448 : 172.0) no description available & (reliability: 978.0) & (original description: Putative CSE16, Description = Caffeoyl shikimate esterase 16, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'niben101scf07169_8978-14241' '(at2g14520 : 488.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein with a domain of unknown function (DUF21) (TAIR:AT4G33700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37329 : 320.0) no description available & (gnl|cdd|31445 : 162.0) no description available & (reliability: 976.0) & (original description: Putative dl3155c, Description = DUF21 domain-containing protein, PFAM = PF01595)' T '35.1' 'not assigned.no ontology' 'niben101scf07172_40414-46028' '(at3g19230 : 546.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G05990.1); Has 60731 Blast hits to 14722 proteins in 650 species: Archae - 18; Bacteria - 1872; Metazoa - 1598; Fungi - 177; Plants - 54234; Viruses - 0; Other Eukaryotes - 2832 (source: NCBI BLink). & (q8lkz1|nork_pea : 114.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 1092.0) & (original description: Putative At3g19230, Description = Leucine-rich repeat-containing protein, PFAM = PF12799;PF12819;PF08263)' T '35.1' 'not assigned.no ontology' 'niben101scf07201_247924-250440' '(at1g76340 : 503.0) Encodes a nucleotide-sugar transporter.; golgi nucleotide sugar transporter 3 (GONST3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: golgi nucleotide sugar transporter 4 (TAIR:AT5G19980.1); Has 1377 Blast hits to 1372 proteins in 233 species: Archae - 0; Bacteria - 8; Metazoa - 324; Fungi - 246; Plants - 675; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36657 : 268.0) no description available & (reliability: 1006.0) & (original description: Putative GONST3, Description = GDP-mannose transporter GONST3, PFAM = PF03151)' T '35.1' 'not assigned.no ontology' 'niben101scf07203_23593-28631' '(at2g41750 : 194.0) DTW domain-containing protein; CONTAINS InterPro DOMAIN/s: DTW (InterPro:IPR005636); Has 487 Blast hits to 487 proteins in 220 species: Archae - 0; Bacteria - 322; Metazoa - 93; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|39583 : 151.0) no description available & (gnl|cdd|67552 : 131.0) no description available & (reliability: 388.0) & (original description: Putative , Description = , PFAM = PF03942)' T '35.1' 'not assigned.no ontology' 'niben101scf07227_146162-171694' '(at2g39340 : 701.0) SAC3/GANP/Nin1/mts3/eIF-3 p25 family; CONTAINS InterPro DOMAIN/s: SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37072 : 365.0) no description available & (gnl|cdd|67037 : 164.0) no description available & (reliability: 1402.0) & (original description: Putative SAC3A, Description = SAC3 family protein A, PFAM = PF03399)' T '35.1' 'not assigned.no ontology' 'niben101scf07247_511088-513830' '(at1g28280 : 125.0) VQ motif-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT2G33780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative VQ19, Description = VQ motif-containing protein 19, PFAM = PF05678)' T '35.1' 'not assigned.no ontology' 'niben101scf07278_34953-39863' '(at4g34020 : 487.0) Class I glutamine amidotransferase-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DJ-1 (InterPro:IPR006287), ThiJ/PfpI (InterPro:IPR002818); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT1G53280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37975 : 220.0) no description available & (gnl|cdd|28870 : 182.0) no description available & (reliability: 974.0) & (original description: Putative DJ1C, Description = Protein DJ-1 homolog C, PFAM = PF01965;PF01965)' T '35.1' 'not assigned.no ontology' 'niben101scf07327_84330-96043' '(at2g46060 : 760.0) transmembrane protein-related; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3522 (InterPro:IPR021910), EGF-like region, conserved site (InterPro:IPR013032); Has 154 Blast hits to 154 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 1520.0) & (original description: Putative BnaA05g05330D, Description = BnaA05g05330D protein, PFAM = PF12036)' T '35.1' 'not assigned.no ontology' 'niben101scf07346_85718-101039' '(at3g53850 : 157.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT5G02060.1); Has 207 Blast hits to 207 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative At3g53850, Description = CASP-like protein 5B2, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf07364_55853-67921' '(at5g05520 : 622.0) Outer membrane OMP85 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial surface antigen (D15) (InterPro:IPR000184), Surface antigen variable number (InterPro:IPR010827); BEST Arabidopsis thaliana protein match is: Outer membrane OMP85 family protein (TAIR:AT3G11070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37813 : 370.0) no description available & (gnl|cdd|34388 : 146.0) no description available & (reliability: 1244.0) & (original description: Putative Os05g0470800, Description = Os05g0470800 protein, PFAM = PF01103;PF07244)' T '35.1' 'not assigned.no ontology' 'niben101scf07365_182287-204574' '(at5g64440 : 803.0) AtFAAH (fatty acid amide hydrolase) modulates endogenous NAEs (N-Acylethanolamines) levels in plants by hydrolyzing NAEs to ethanolamine and their corresponding free fatty acids. NAE depletion likely participates in the regulation of plant growth.; fatty acid amide hydrolase (FAAH); FUNCTIONS IN: N-(long-chain-acyl)ethanolamine deacylase activity, amidase activity; INVOLVED IN: defense response to bacterium; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT3G25660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36425 : 363.0) no description available & (gnl|cdd|30503 : 326.0) no description available & (reliability: 1606.0) & (original description: Putative gatA, Description = Fatty acid amide hydrolase, PFAM = PF01425)' T '35.1' 'not assigned.no ontology' 'niben101scf07382_111014-117175' '(at1g80500 : 169.0) SNARE-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, ER to Golgi vesicle-mediated transport; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sedlin (InterPro:IPR006722), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT2G20930.1); Has 584 Blast hits to 580 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 289; Fungi - 112; Plants - 97; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|38697 : 128.0) no description available & (gnl|cdd|86702 : 124.0) no description available & (reliability: 338.0) & (original description: Putative TRS20, Description = Trafficking protein particle complex subunit 2, PFAM = PF04628)' T '35.1' 'not assigned.no ontology' 'niben101scf07391_26441-34578' '(at1g12640 : 693.0) MBOAT (membrane bound O-acyl transferase) family protein; FUNCTIONS IN: acyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); BEST Arabidopsis thaliana protein match is: MBOAT (membrane bound O-acyl transferase) family protein (TAIR:AT1G63050.1); Has 1204 Blast hits to 1199 proteins in 313 species: Archae - 0; Bacteria - 269; Metazoa - 625; Fungi - 142; Plants - 47; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink). & (gnl|cdd|37915 : 443.0) no description available & (gnl|cdd|34801 : 189.0) no description available & (reliability: 1386.0) & (original description: Putative LPLAT1, Description = Lysophospholipid acyltransferase 1, PFAM = PF03062)' T '35.1' 'not assigned.no ontology' 'niben101scf07391_528182-531252' '(at4g11655 : 116.0) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G36330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative At4g11655, Description = CASP-like protein 4A4, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf07423_54625-62250' '(at5g60760 : 758.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G45090.1); Has 1216 Blast hits to 969 proteins in 195 species: Archae - 93; Bacteria - 85; Metazoa - 220; Fungi - 67; Plants - 127; Viruses - 43; Other Eukaryotes - 581 (source: NCBI BLink). & (gnl|cdd|32257 : 145.0) no description available & (reliability: 1476.0) & (original description: Putative LPA1, Description = P-loop NTPase domain-containing protein LPA1, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf07428_210295-213008' '(at3g23255 : 233.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown. & (reliability: 466.0) & (original description: Putative F383_10246, Description = tRNA dimethylallyltransferase, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf07438_595754-608018' '(at3g59630 : 540.0) diphthamide synthesis DPH2 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: peptidyl-diphthamide biosynthetic process from peptidyl-histidine; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Diphthamide synthesis, DPH1/DHP2 (InterPro:IPR002728), Diphthamide synthesis, DHP2 (InterPro:IPR010014); BEST Arabidopsis thaliana protein match is: diphthamide synthesis DPH2 family protein (TAIR:AT5G62030.1); Has 995 Blast hits to 948 proteins in 287 species: Archae - 127; Bacteria - 0; Metazoa - 243; Fungi - 308; Plants - 94; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (gnl|cdd|37859 : 335.0) no description available & (gnl|cdd|85730 : 183.0) no description available & (reliability: 1080.0) & (original description: Putative Os11g0265600, Description = Diphthamide biosynthesis protein 2, PFAM = PF01866)' T '35.1' 'not assigned.no ontology' 'niben101scf07466_715414-723269' '(at1g16860 : 620.0) Ubiquitin-specific protease family C19-related protein; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: Ubiquitin-specific protease family C19-related protein (TAIR:AT1G78880.1); Has 605 Blast hits to 295 proteins in 85 species: Archae - 0; Bacteria - 22; Metazoa - 26; Fungi - 28; Plants - 169; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 1240.0) & (original description: Putative BnaC05g12870D, Description = BnaC05g12870D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf07498_231069-235444' '(at4g13600 : 113.0) Carbohydrate-binding X8 domain superfamily protein; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: plasmodesmata callose-binding protein 3 (TAIR:AT1G18650.1); Has 487 Blast hits to 485 proteins in 21 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 8; Plants - 474; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 92.2) no description available & (reliability: 226.0) & (original description: Putative PDCB3, Description = CBM43-containing protein, PFAM = PF07983)' T '35.1' 'not assigned.no ontology' 'niben101scf07508_19667-36323' '(at2g28390 : 320.0) SAND family protein; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar fusion protein MON1 (InterPro:IPR004353); Has 753 Blast hits to 594 proteins in 226 species: Archae - 6; Bacteria - 38; Metazoa - 289; Fungi - 213; Plants - 47; Viruses - 3; Other Eukaryotes - 157 (source: NCBI BLink). & (gnl|cdd|36215 : 120.0) no description available & (gnl|cdd|66814 : 119.0) no description available & (reliability: 640.0) & (original description: Putative At2g28390, Description = At2g28390/T1B3.9, PFAM = PF03164)' T '35.1' 'not assigned.no ontology' 'niben101scf07508_361267-366410' '(at1g18720 : 222.0) Protein of unknown function (DUF962); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF962 (InterPro:IPR009305); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF962) (TAIR:AT1G74440.1); Has 638 Blast hits to 636 proteins in 299 species: Archae - 0; Bacteria - 335; Metazoa - 3; Fungi - 143; Plants - 88; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|38502 : 184.0) no description available & (gnl|cdd|69636 : 132.0) no description available & (reliability: 444.0) & (original description: Putative Sb49, Description = YGL010w-like protein, PFAM = PF06127)' T '35.1' 'not assigned.no ontology' 'niben101scf07515_44514-50425' '(at4g32190 : 365.0) Myosin heavy chain-related protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35383 : 87.2) no description available & (reliability: 730.0) & (original description: Putative At4g32190, Description = Myosin heavy chain-related protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf07516_467075-497740' '(at2g45540 : 3481.0) WD-40 repeat family protein / beige-related; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), Beige/BEACH (InterPro:IPR000409), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G60920.1). & (gnl|cdd|36998 : 541.0) no description available & (gnl|cdd|85884 : 487.0) no description available & (reliability: 6962.0) & (original description: Putative BCHC2, Description = BEACH domain-containing protein C2, PFAM = PF00400;PF15787;PF02138;PF14844)' T '35.1' 'not assigned.no ontology' 'niben101scf07517_115289-120766' '(at2g38710 : 347.0) AMMECR1 family; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMMECR1 (InterPro:IPR002733); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38484 : 289.0) no description available & (gnl|cdd|65648 : 112.0) no description available & (reliability: 694.0) & (original description: Putative At2g38710, Description = Uncharacterized protein At2g38710, PFAM = PF01871)' T '35.1' 'not assigned.no ontology' 'niben101scf07518_81080-85378' '(at1g13635 : 305.0) DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT5G57970.2). & (gnl|cdd|86301 : 212.0) no description available & (reliability: 610.0) & (original description: Putative tag, Description = DNA-3-methyladenine glycosylase I, PFAM = PF03352)' T '35.1' 'not assigned.no ontology' 'niben101scf07528_147192-156732' '(at1g03687 : 440.0) DTW domain-containing protein; CONTAINS InterPro DOMAIN/s: DTW (InterPro:IPR005636); Has 477 Blast hits to 477 proteins in 253 species: Archae - 0; Bacteria - 432; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|67552 : 129.0) no description available & (reliability: 880.0) & (original description: Putative LOC100501802, Description = DTW domain-containing protein-like, PFAM = PF03942)' T '35.1' 'not assigned.no ontology' 'niben101scf07552_51637-54746' '(at4g34320 : 445.0) Protein of unknown function (DUF677); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, sepal, flower, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT4G34330.1); Has 254 Blast hits to 251 proteins in 19 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 0; Plants - 246; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68623 : 395.0) no description available & (reliability: 890.0) & (original description: Putative At4g34320, Description = UPF0496 protein At4g34320, PFAM = PF05055)' T '35.1' 'not assigned.no ontology' 'niben101scf07579_157124-169903' '(at5g50970 : 524.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G19920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35486 : 239.0) no description available & (gnl|cdd|29257 : 92.4) no description available & (reliability: 1048.0) & (original description: Putative At5g50970, Description = Transducin/WD40 domain-containing protein, PFAM = PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf07586_18635-22532' '(at3g54200 : 91.3) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT3G05975.1); Has 631 Blast hits to 630 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 631; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative PGSC0003DMG401027691, Description = Late embryogenesis abundant protein, LEA-14, PFAM = PF03168)' T '35.1' 'not assigned.no ontology' 'niben101scf07591_38348-48874' '(at1g48790 : 569.0) associated molecule with the SH3 domain of STAM 1 (AMSH1); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: associated molecule with the SH3 domain of STAM 3 (TAIR:AT4G16144.1); Has 1172 Blast hits to 1019 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 476; Fungi - 293; Plants - 278; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|38091 : 353.0) no description available & (gnl|cdd|85425 : 81.2) no description available & (reliability: 1138.0) & (original description: Putative AMSH1, Description = AMSH-like ubiquitin thioesterase 1, PFAM = PF08969;PF01398)' T '35.1' 'not assigned.no ontology' 'niben101scf07607_13421-22793' '(at4g37470 : 351.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G03990.1); Has 8593 Blast hits to 8591 proteins in 1653 species: Archae - 86; Bacteria - 6869; Metazoa - 120; Fungi - 103; Plants - 302; Viruses - 19; Other Eukaryotes - 1094 (source: NCBI BLink). & (reliability: 702.0) & (original description: Putative KAI2, Description = Probable esterase KAI2, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf07616_215344-244307' '(at5g63620 : 567.0) GroES-like zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: cobalt ion binding, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT1G64710.1); Has 51156 Blast hits to 51010 proteins in 3327 species: Archae - 886; Bacteria - 33078; Metazoa - 1881; Fungi - 3909; Plants - 3940; Viruses - 3; Other Eukaryotes - 7459 (source: NCBI BLink). & (gnl|cdd|35245 : 356.0) no description available & (gnl|cdd|31262 : 285.0) no description available & (p48977|adh_maldo : 135.0) Alcohol dehydrogenase (EC 1.1.1.1) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 1134.0) & (original description: Putative pco065682a, Description = Alcohol dehydrogenase, PFAM = PF08240;PF00107)' T '35.1' 'not assigned.no ontology' 'niben101scf07623_230918-235550' '(at1g16880 : 336.0) uridylyltransferase-related; INVOLVED IN: response to cold; LOCATED IN: chloroplast thylakoid membrane, stromule, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: ACT domain-containing protein (TAIR:AT5G04740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 672.0) & (original description: Putative ACR11, Description = DS12 from 2D-PAGE of leaf protein, putative, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf07640_45170-74618' '(at3g02700 : 216.0) NC domain-containing protein-related; CONTAINS InterPro DOMAIN/s: NC (InterPro:IPR007053); BEST Arabidopsis thaliana protein match is: NC domain-containing protein-related (TAIR:AT5G16360.1); Has 186 Blast hits to 185 proteins in 40 species: Archae - 0; Bacteria - 31; Metazoa - 10; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative At5g06370, Description = Lecithin retinol acyltransferase, PFAM = PF04970)' T '35.1' 'not assigned.no ontology' 'niben101scf07645_175069-184726' '(at3g11470 : 319.0) 4'-phosphopantetheinyl transferase superfamily; FUNCTIONS IN: holo-[acyl-carrier-protein] synthase activity, magnesium ion binding, transferase activity; INVOLVED IN: metabolic process, macromolecule biosynthetic process; CONTAINS InterPro DOMAIN/s: 4'-phosphopantetheinyl transferase (InterPro:IPR008278); BEST Arabidopsis thaliana protein match is: 4'-phosphopantetheinyl transferase superfamily (TAIR:AT2G02770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36163 : 185.0) no description available & (gnl|cdd|32274 : 86.6) no description available & (reliability: 638.0) & (original description: Putative HAS, Description = Holo-ACP synthase, PFAM = PF01648)' T '35.1' 'not assigned.no ontology' 'niben101scf07668_1-7194' '(at3g07180 : 652.0) GPI transamidase component PIG-S-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-glycan biosynthesis class S protein (InterPro:IPR019540). & (gnl|cdd|37670 : 369.0) no description available & (reliability: 1304.0) & (original description: Putative BnaA05g30390D, Description = BnaA05g30390D protein, PFAM = PF10510)' T '35.1' 'not assigned.no ontology' 'niben101scf07673_277079-315983' '(at1g06560 : 711.0) NOL1/NOP2/sun family protein; FUNCTIONS IN: methyltransferase activity, RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site (InterPro:IPR018314), Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G26600.1); Has 13569 Blast hits to 8411 proteins in 2331 species: Archae - 604; Bacteria - 9970; Metazoa - 826; Fungi - 418; Plants - 360; Viruses - 0; Other Eukaryotes - 1391 (source: NCBI BLink). & (gnl|cdd|36338 : 207.0) no description available & (gnl|cdd|30493 : 107.0) no description available & (reliability: 1422.0) & (original description: Putative Sb07g014990, Description = Putative uncharacterized protein Sb07g014990, PFAM = PF01189;PF01189;PF01472)' T '35.1' 'not assigned.no ontology' 'niben101scf07681_264324-267130' '(at2g27080 : 223.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT5G21130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70773 : 126.0) no description available & (reliability: 446.0) & (original description: Putative PGSC0003DMG400002014, Description = LEA2-like protein, PFAM = PF03168)' T '35.1' 'not assigned.no ontology' 'niben101scf07695_79314-86990' '(at4g28070 : 707.0) AFG1-like ATPase family protein; FUNCTIONS IN: ATPase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: ATPase, AFG1-like (InterPro:IPR005654); BEST Arabidopsis thaliana protein match is: AFG1-like ATPase family protein (TAIR:AT4G30490.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37594 : 477.0) no description available & (gnl|cdd|31674 : 338.0) no description available & (reliability: 1414.0) & (original description: Putative Lace1, Description = Lactation elevated protein 1, PFAM = PF03969)' T '35.1' 'not assigned.no ontology' 'niben101scf07709_112614-116183' '(at1g49405 : 124.0) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT3G50810.1); Has 205 Blast hits to 205 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative Os03g0767900, Description = CASP-like protein 5C1, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf07728_190502-195505' '(at2g34460 : 343.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G18890.1); Has 4817 Blast hits to 4761 proteins in 1319 species: Archae - 56; Bacteria - 3261; Metazoa - 151; Fungi - 101; Plants - 561; Viruses - 0; Other Eukaryotes - 687 (source: NCBI BLink). & (gnl|cdd|36417 : 178.0) no description available & (reliability: 686.0) & (original description: Putative At2g34460, Description = Uncharacterized protein At2g34460, chloroplastic, PFAM = PF13460)' T '35.1' 'not assigned.no ontology' 'niben101scf07741_496317-508232' '(at1g16860 : 511.0) Ubiquitin-specific protease family C19-related protein; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: Ubiquitin-specific protease family C19-related protein (TAIR:AT1G78880.1); Has 605 Blast hits to 295 proteins in 85 species: Archae - 0; Bacteria - 22; Metazoa - 26; Fungi - 28; Plants - 169; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 1022.0) & (original description: Putative Sb01g030324, Description = Putative uncharacterized protein Sb01g030324, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf07744_131579-137169' '(at5g40670 : 322.0) PQ-loop repeat family protein / transmembrane family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cystinosin/ERS1p repeat (InterPro:IPR006603), Lysosomal cystine transporter (InterPro:IPR005282); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38355 : 282.0) no description available & (reliability: 644.0) & (original description: Putative ctns, Description = Cystinosin, PFAM = PF04193;PF04193)' T '35.1' 'not assigned.no ontology' 'niben101scf07748_370839-375717' '(at1g08800 : 151.0) Protein of unknown function, DUF593; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT2G30690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68159 : 133.0) no description available & (reliability: 302.0) & (original description: Putative MYOB1, Description = BnaA04g17750D protein, PFAM = PF04576)' T '35.1' 'not assigned.no ontology' 'niben101scf07763_228635-232604' '(at3g14172 : 247.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G72410.1). & (reliability: 494.0) & (original description: Putative At3g14172, Description = BnaA03g33240D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf07783_148672-154335' '(at1g51450 : 431.0) Nuclear protein required for early embryogenesis.; TRAUCO (TRO); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: histone methylation, embryo development; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SPla/RYanodine receptor subgroup (InterPro:IPR018355), B302 (SPRY)-like (InterPro:IPR001870), SPla/RYanodine receptor SPRY (InterPro:IPR003877); Has 2366 Blast hits to 2103 proteins in 282 species: Archae - 12; Bacteria - 162; Metazoa - 1213; Fungi - 403; Plants - 173; Viruses - 13; Other Eukaryotes - 390 (source: NCBI BLink). & (gnl|cdd|37837 : 268.0) no description available & (gnl|cdd|47755 : 84.3) no description available & (reliability: 862.0) & (original description: Putative ASH2, Description = Set1/Ash2 histone methyltransferase complex subunit ASH2, PFAM = PF00622)' T '35.1' 'not assigned.no ontology' 'niben101scf07786_97249-128891' '(at1g44910 : 551.0) Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries.; pre-mRNA-processing protein 40A (PRP40A); CONTAINS InterPro DOMAIN/s: FF domain (InterPro:IPR002713), WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: pre-mRNA-processing protein 40B (TAIR:AT3G19670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35374 : 249.0) no description available & (gnl|cdd|34707 : 110.0) no description available & (reliability: 1102.0) & (original description: Putative Med35, Description = Mediator of RNA polymerase II transcription subunit 35-like protein, PFAM = PF01846;PF01846;PF01846;PF01846;PF00397;PF00397)' T '35.1' 'not assigned.no ontology' 'niben101scf07786_116468-128675' '(at1g44910 : 354.0) Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries.; pre-mRNA-processing protein 40A (PRP40A); CONTAINS InterPro DOMAIN/s: FF domain (InterPro:IPR002713), WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: pre-mRNA-processing protein 40B (TAIR:AT3G19670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35374 : 182.0) no description available & (gnl|cdd|34707 : 94.5) no description available & (reliability: 708.0) & (original description: Putative Med35, Description = FF domain-containing protein, PFAM = PF01846;PF01846;PF01846;PF01846)' T '35.1' 'not assigned.no ontology' 'niben101scf07798_178243-191163' '(at3g14172 : 634.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G72410.1). & (reliability: 1268.0) & (original description: Putative PGSC0003DMG400022906, Description = BnaA03g33240D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf07805_175303-197195' '(at1g44910 : 548.0) Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries.; pre-mRNA-processing protein 40A (PRP40A); CONTAINS InterPro DOMAIN/s: FF domain (InterPro:IPR002713), WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: pre-mRNA-processing protein 40B (TAIR:AT3G19670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35374 : 262.0) no description available & (gnl|cdd|34707 : 112.0) no description available & (reliability: 1096.0) & (original description: Putative PRP40A, Description = Pre-mRNA-processing protein 40A, PFAM = PF01846;PF01846;PF01846;PF01846;PF00397;PF00397)' T '35.1' 'not assigned.no ontology' 'niben101scf07813_180410-190580' '(at3g05940 : 585.0) Protein of unknown function (DUF300); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT5G26740.3); Has 926 Blast hits to 920 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 354; Fungi - 191; Plants - 245; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (gnl|cdd|37852 : 339.0) no description available & (gnl|cdd|67249 : 334.0) no description available & (reliability: 1078.0) & (original description: Putative At5g26734, Description = AT5G26740 protein, PFAM = PF03619)' T '35.1' 'not assigned.no ontology' 'niben101scf07820_24473-27522' '(at2g37400 : 276.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid lumen, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G53560.1); Has 2154 Blast hits to 1804 proteins in 477 species: Archae - 203; Bacteria - 1195; Metazoa - 120; Fungi - 25; Plants - 138; Viruses - 0; Other Eukaryotes - 473 (source: NCBI BLink). & (reliability: 552.0) & (original description: Putative At2g37400, Description = At2g37400, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf07825_8671-14967' '(at5g12460 : 399.0) Protein of unknown function (DUF604); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT2G37730.1); Has 562 Blast hits to 553 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 108; Fungi - 170; Plants - 273; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|68226 : 239.0) no description available & (gnl|cdd|37457 : 176.0) no description available & (reliability: 798.0) & (original description: Putative BnaC09g44230D, Description = BnaC09g44230D protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben101scf07825_107019-111484' '(at5g12460 : 356.0) Protein of unknown function (DUF604); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT2G37730.1); Has 562 Blast hits to 553 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 108; Fungi - 170; Plants - 273; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|68226 : 216.0) no description available & (gnl|cdd|37457 : 152.0) no description available & (reliability: 712.0) & (original description: Putative BnaA10g29930D, Description = BnaA10g29930D protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben101scf07825_183666-190955' '(at5g12460 : 392.0) Protein of unknown function (DUF604); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT2G37730.1); Has 562 Blast hits to 553 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 108; Fungi - 170; Plants - 273; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|68226 : 222.0) no description available & (gnl|cdd|37457 : 162.0) no description available & (reliability: 784.0) & (original description: Putative BnaA10g29930D, Description = BnaA10g29930D protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben101scf07825_205422-210988' '(at5g12460 : 366.0) Protein of unknown function (DUF604); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT2G37730.1); Has 562 Blast hits to 553 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 108; Fungi - 170; Plants - 273; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|68226 : 223.0) no description available & (gnl|cdd|37457 : 158.0) no description available & (reliability: 732.0) & (original description: Putative BnaA10g29930D, Description = BnaA10g29930D protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben101scf07829_351529-367987' '(at1g15420 : 159.0) CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12 (InterPro:IPR007148); Has 764 Blast hits to 656 proteins in 193 species: Archae - 0; Bacteria - 42; Metazoa - 237; Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes - 223 (source: NCBI BLink). & (gnl|cdd|39747 : 94.7) no description available & (gnl|cdd|71597 : 90.2) no description available & (reliability: 318.0) & (original description: Putative Sb09g027390, Description = Putative uncharacterized protein Sb09g027390, PFAM = PF04003)' T '35.1' 'not assigned.no ontology' 'niben101scf07841_168182-171109' '(at5g19820 : 133.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37382 : 116.0) no description available & (reliability: 266.0) & (original description: Putative emb2734, Description = Importin-5, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf07849_173137-181267' '(at5g07830 : 701.0) Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-β-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be membrane-associated.; glucuronidase 2 (GUS2); FUNCTIONS IN: beta-glucuronidase activity; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 79, N-terminal (InterPro:IPR005199); BEST Arabidopsis thaliana protein match is: glucuronidase 1 (TAIR:AT5G61250.1); Has 380 Blast hits to 370 proteins in 68 species: Archae - 0; Bacteria - 29; Metazoa - 190; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|67288 : 403.0) no description available & (reliability: 1402.0) & (original description: Putative At5g07830, Description = Heparanase-like protein 1, PFAM = PF03662)' T '35.1' 'not assigned.no ontology' 'niben101scf07850_594366-597963' '(at2g36100 : 183.0) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT3G11550.1); Has 599 Blast hits to 599 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 599; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68120 : 119.0) no description available & (reliability: 366.0) & (original description: Putative STG, Description = CASP-like protein, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf07933_225911-233426' '(at5g60760 : 766.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G45090.1); Has 1216 Blast hits to 969 proteins in 195 species: Archae - 93; Bacteria - 85; Metazoa - 220; Fungi - 67; Plants - 127; Viruses - 43; Other Eukaryotes - 581 (source: NCBI BLink). & (gnl|cdd|32257 : 144.0) no description available & (reliability: 1490.0) & (original description: Putative At5g60760, Description = P-loop NTPase domain-containing protein LPA1 homolog 1, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf07938_826-3284' '(at5g14890 : 119.0) NHL domain-containing protein; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NHL repeat (InterPro:IPR001258), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT1G70280.2); Has 2211 Blast hits to 1172 proteins in 193 species: Archae - 21; Bacteria - 928; Metazoa - 143; Fungi - 0; Plants - 261; Viruses - 0; Other Eukaryotes - 858 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative At5g14890, Description = NHL domain-containing protein, putative, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf07939_124057-135072' '(at4g31040 : 493.0) CemA-like proton extrusion protein-related; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CemA (InterPro:IPR004282); BEST Arabidopsis thaliana protein match is: CemA-like proton extrusion protein-related (TAIR:ATCG00530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|81000 : 143.0) no description available & (q9tkz2|cema_nepol : 124.0) Chloroplast envelope membrane protein - Nephroselmis olivacea & (reliability: 986.0) & (original description: Putative At4g31040, Description = CemA-like proton extrusion protein-like protein, PFAM = PF03040)' T '35.1' 'not assigned.no ontology' 'niben101scf07942_60390-80049' '(at5g11040 : 1761.0) TRS120; CONTAINS InterPro DOMAIN/s: Transport protein Trs120 (InterPro:IPR013935); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37164 : 798.0) no description available & (gnl|cdd|87580 : 153.0) no description available & (reliability: 3522.0) & (original description: Putative TRS120, Description = Trafficking protein particle complex II-specific subunit 120 homolog, PFAM = PF08626;PF08626;PF08626)' T '35.1' 'not assigned.no ontology' 'niben101scf07944_3619-7936' '(at4g15050 : 224.0) Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G10190.1); Has 633 Blast hits to 604 proteins in 22 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 6; Plants - 620; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66735 : 162.0) no description available & (reliability: 408.0) & (original description: Putative , Description = , PFAM = PF03080;PF14365)' T '35.1' 'not assigned.no ontology' 'niben101scf08002_121840-125126' '(at3g29240 : 351.0) Protein of unknown function (DUF179); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF179 (InterPro:IPR003774); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF179) (TAIR:AT1G33780.1); Has 1065 Blast hits to 1065 proteins in 382 species: Archae - 0; Bacteria - 730; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (gnl|cdd|86052 : 149.0) no description available & (reliability: 702.0) & (original description: Putative At3g29240, Description = AT3g29240/MXO21_9, PFAM = PF02622)' T '35.1' 'not assigned.no ontology' 'niben101scf08002_364139-369919' '(at1g13030 : 137.0) sphere organelles protein-related; Has 14464 Blast hits to 9695 proteins in 837 species: Archae - 14; Bacteria - 1320; Metazoa - 4989; Fungi - 1376; Plants - 652; Viruses - 103; Other Eukaryotes - 6010 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative COIL, Description = Atcoilin, PFAM = PF15862)' T '35.1' 'not assigned.no ontology' 'niben101scf08002_476712-479089' '(at5g08060 : 145.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; Has 42 Blast hits to 42 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative F13G24.260, Description = Putative uncharacterized protein At5g08060, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf08039_9919-15821' '(at5g42570 : 203.0) B-cell receptor-associated 31-like; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: B-cell receptor-associated protein 31-like (TAIR:AT1G11905.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37173 : 128.0) no description available & (reliability: 406.0) & (original description: Putative At1g11905, Description = B-cell receptor-associated protein 31-like protein, PFAM = PF05529)' T '35.1' 'not assigned.no ontology' 'niben101scf08041_154223-159802' '(at5g12460 : 412.0) Protein of unknown function (DUF604); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT2G37730.1); Has 562 Blast hits to 553 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 108; Fungi - 170; Plants - 273; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|68226 : 258.0) no description available & (gnl|cdd|37457 : 201.0) no description available & (reliability: 824.0) & (original description: Putative BnaC09g44220D, Description = BnaC09g44220D protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben101scf08057_51-4034' '(at1g14870 : 184.0) PLANT CADMIUM RESISTANCE 2 (PCR2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT5G35525.1); Has 803 Blast hits to 802 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 123; Fungi - 115; Plants - 527; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|86720 : 118.0) no description available & (reliability: 368.0) & (original description: Putative PCR2, Description = Protein PLANT CADMIUM RESISTANCE 2, PFAM = PF04749)' T '35.1' 'not assigned.no ontology' 'niben101scf08072_72571-85263' '(at5g06570 : 345.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 17 (TAIR:AT5G16080.1); Has 10656 Blast hits to 10638 proteins in 1662 species: Archae - 116; Bacteria - 6264; Metazoa - 727; Fungi - 1011; Plants - 1362; Viruses - 3; Other Eukaryotes - 1173 (source: NCBI BLink). & (gnl|cdd|36728 : 223.0) no description available & (gnl|cdd|87389 : 200.0) no description available & (q6l545|gid1_orysa : 138.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 690.0) & (original description: Putative CXE15, Description = Probable carboxylesterase 15, PFAM = PF07859)' T '35.1' 'not assigned.no ontology' 'niben101scf08111_226168-231599' '(at1g14870 : 186.0) PLANT CADMIUM RESISTANCE 2 (PCR2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT5G35525.1); Has 803 Blast hits to 802 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 123; Fungi - 115; Plants - 527; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|86720 : 123.0) no description available & (reliability: 372.0) & (original description: Putative PCR2, Description = Protein PLANT CADMIUM RESISTANCE 2, PFAM = PF04749)' T '35.1' 'not assigned.no ontology' 'niben101scf08127_101838-105731' '(at2g03810 : 80.1) 18S pre-ribosomal assembly protein gar2-related; FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cotyledon; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative At2g03810, Description = 18S pre-ribosomal assembly protein gar2-related protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf08134_175838-189197' '(at2g15240 : 358.0) UNC-50 family protein; CONTAINS InterPro DOMAIN/s: UNC-50 (InterPro:IPR007881); Has 331 Blast hits to 331 proteins in 162 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 93; Plants - 47; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|38222 : 284.0) no description available & (gnl|cdd|68776 : 273.0) no description available & (reliability: 716.0) & (original description: Putative gpm679, Description = UNC-50 family protein, PFAM = PF05216)' T '35.1' 'not assigned.no ontology' 'niben101scf08134_237162-240486' '(at3g19460 : 204.0) Reticulon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT2G15280.1); Has 985 Blast hits to 985 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 550; Fungi - 0; Plants - 426; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|37003 : 175.0) no description available & (gnl|cdd|66169 : 170.0) no description available & (reliability: 408.0) & (original description: Putative RTNLB11, Description = Reticulon-like protein B11, PFAM = PF02453)' T '35.1' 'not assigned.no ontology' 'niben101scf08160_575334-580805' '(at1g75200 : 920.0) flavodoxin family protein / radical SAM domain-containing protein; FUNCTIONS IN: iron-sulfur cluster binding, oxidoreductase activity, FMN binding, catalytic activity; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Radical SAM (InterPro:IPR007197), Wyosine base formation (InterPro:IPR013917); BEST Arabidopsis thaliana protein match is: P450 reductase 2 (TAIR:AT4G30210.2); Has 3108 Blast hits to 3089 proteins in 883 species: Archae - 191; Bacteria - 976; Metazoa - 668; Fungi - 593; Plants - 205; Viruses - 0; Other Eukaryotes - 475 (source: NCBI BLink). & (gnl|cdd|36375 : 723.0) no description available & (gnl|cdd|31075 : 242.0) no description available & (reliability: 1840.0) & (original description: Putative TYW1, Description = S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase, PFAM = PF00258;PF08608;PF04055)' T '35.1' 'not assigned.no ontology' 'niben101scf08162_115334-121467' '(at5g66550 : 140.0) Maf-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Maf-like protein (InterPro:IPR003697); BEST Arabidopsis thaliana protein match is: Maf-like protein (TAIR:AT5G42770.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|29954 : 99.8) no description available & (reliability: 280.0) & (original description: Putative Os11g0549655, Description = Os11g0549655 protein, PFAM = PF02545)' T '35.1' 'not assigned.no ontology' 'niben101scf08179_347697-351116' '(at5g61630 : 86.3) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative At5g61630, Description = Putative uncharacterized protein T2I1_200, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf08182_2202-11790' '(at5g56130 : 596.0) Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.; TEX1; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein (TAIR:AT5G67320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36621 : 476.0) no description available & (gnl|cdd|29257 : 147.0) no description available & (p93107|pf20_chlre : 92.4) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1192.0) & (original description: Putative THO3, Description = THO complex subunit 3, PFAM = PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf08192_271467-277757' '(at5g13800 : 545.0) Encodes a pheophytinase that is involved in chlorophyll breakdown.; pheophytinase (PPH); FUNCTIONS IN: hydrolase activity, pheophytinase activity; INVOLVED IN: chlorophyll catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G36530.2); Has 3014 Blast hits to 3012 proteins in 698 species: Archae - 17; Bacteria - 1970; Metazoa - 110; Fungi - 4; Plants - 264; Viruses - 0; Other Eukaryotes - 649 (source: NCBI BLink). & (gnl|cdd|36667 : 168.0) no description available & (gnl|cdd|30941 : 98.2) no description available & (reliability: 1090.0) & (original description: Putative PPH, Description = Pheophytinase, chloroplastic, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf08200_542497-549707' '(at5g42870 : 363.0) phosphatidic acid phosphohydrolase 2 (PAH2); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: cellular response to phosphate starvation, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LNS2, Lipin/Ned1/Smp2 (InterPro:IPR013209), Lipin, N-terminal conserved region (InterPro:IPR007651); BEST Arabidopsis thaliana protein match is: Lipin family protein (TAIR:AT3G09560.3). & (gnl|cdd|37327 : 342.0) no description available & (gnl|cdd|34687 : 217.0) no description available & (reliability: 726.0) & (original description: Putative LPIN2, Description = LPIN2, PFAM = PF04571;PF08235)' T '35.1' 'not assigned.no ontology' 'niben101scf08211_346866-359947' '(at3g21290 : 234.0) dentin sialophosphoprotein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Occludin/RNA polymerase II elongation factor, ELL domain (InterPro:IPR010844); Has 17175 Blast hits to 8691 proteins in 788 species: Archae - 88; Bacteria - 6651; Metazoa - 4182; Fungi - 1520; Plants - 456; Viruses - 109; Other Eukaryotes - 4169 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative LOC100383828, Description = DNA-binding protein ESCAROLA, PFAM = PF07303)' T '35.1' 'not assigned.no ontology' 'niben101scf08230_53262-56761' '(at3g10630 : 593.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); Has 3797 Blast hits to 3780 proteins in 938 species: Archae - 179; Bacteria - 2598; Metazoa - 0; Fungi - 1; Plants - 68; Viruses - 7; Other Eukaryotes - 944 (source: NCBI BLink). & (gnl|cdd|30787 : 82.0) no description available & (reliability: 1186.0) & (original description: Putative gwEuk, Description = Glycose transferase group 1 domain protein, PFAM = PF00534)' T '35.1' 'not assigned.no ontology' 'niben101scf08285_71403-88126' '(at3g42660 : 1048.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), Protein of unknown function DUF3639 (InterPro:IPR022100), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G23430.1); Has 41589 Blast hits to 20655 proteins in 706 species: Archae - 66; Bacteria - 8583; Metazoa - 14223; Fungi - 8894; Plants - 4578; Viruses - 3; Other Eukaryotes - 5242 (source: NCBI BLink). & (gnl|cdd|36488 : 659.0) no description available & (gnl|cdd|29257 : 159.0) no description available & (reliability: 2096.0) & (original description: Putative Os09g0241100, Description = Os09g0241100 protein, PFAM = PF12894;PF12341;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf08304_454535-464723' '(at3g15000 : 230.0) cobalt ion binding; FUNCTIONS IN: cobalt ion binding; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT3G06790.2); Has 57621 Blast hits to 29750 proteins in 1231 species: Archae - 14; Bacteria - 7130; Metazoa - 26978; Fungi - 8402; Plants - 8184; Viruses - 944; Other Eukaryotes - 5969 (source: NCBI BLink). & (q38732|dag_antma : 120.0) DAG protein, chloroplast precursor - Antirrhinum majus (Garden snapdragon) & (reliability: 460.0) & (original description: Putative MORF8, Description = Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf08351_170827-173867' '(at2g38830 : 227.0) Ubiquitin-conjugating enzyme/RWD-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein modification process, protein transport; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Tumour susceptibility gene 101 (InterPro:IPR008883), Steadiness box (InterPro:IPR017916); BEST Arabidopsis thaliana protein match is: ELCH-like (TAIR:AT5G13860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37602 : 172.0) no description available & (gnl|cdd|86940 : 96.1) no description available & (reliability: 454.0) & (original description: Putative PGSC0003DMG400019336, Description = Tumor susceptibility family protein, PFAM = PF09454;PF05743)' T '35.1' 'not assigned.no ontology' 'niben101scf08357_336317-339375' '(at5g15290 : 119.0) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT1G14160.1); Has 635 Blast hits to 635 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 635; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68120 : 103.0) no description available & (reliability: 238.0) & (original description: Putative STG, Description = CASP-like protein, PFAM = PF04535;PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf08394_158489-162289' '(at2g03810 : 88.6) 18S pre-ribosomal assembly protein gar2-related; FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cotyledon; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative PGSC0003DMG400001936, Description = 18S pre-ribosomal assembly protein gar2-related protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf08443_151938-160185' '(at4g27340 : 655.0) Met-10+ like family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Met10 (InterPro:IPR003402); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G56120.1); Has 1666 Blast hits to 1640 proteins in 617 species: Archae - 405; Bacteria - 591; Metazoa - 172; Fungi - 146; Plants - 123; Viruses - 0; Other Eukaryotes - 229 (source: NCBI BLink). & (gnl|cdd|37289 : 256.0) no description available & (gnl|cdd|32590 : 200.0) no description available & (reliability: 1310.0) & (original description: Putative trm5, Description = tRNA (guanine(37)-N1)-methyltransferase, PFAM = PF02475)' T '35.1' 'not assigned.no ontology' 'niben101scf08446_255087-257911' '(at4g03540 : 125.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT1G03700.1); Has 607 Blast hits to 607 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68120 : 92.0) no description available & (reliability: 250.0) & (original description: Putative RCOM_0936380, Description = CASP-like protein 1C2, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf08447_1072374-1085809' '(at5g48545 : 173.0) Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro.; histidine triad nucleotide-binding 3 (HINT3); CONTAINS InterPro DOMAIN/s: Histidine triad-like motif (InterPro:IPR011146), Histidine triad (HIT) protein (InterPro:IPR001310), Histidine triad, conserved site (InterPro:IPR019808), Histidine triad motif (InterPro:IPR011151); BEST Arabidopsis thaliana protein match is: HISTIDINE TRIAD NUCLEOTIDE-BINDING 2 (TAIR:AT1G31160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29590 : 117.0) no description available & (gnl|cdd|38485 : 95.4) no description available & (reliability: 346.0) & (original description: Putative HINT3, Description = Adenylylsulfatase HINT3, PFAM = PF01230)' T '35.1' 'not assigned.no ontology' 'niben101scf08457_68476-78827' '(at2g33255 : 360.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity, phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 1 (InterPro:IPR006439); Has 3270 Blast hits to 3270 proteins in 1213 species: Archae - 109; Bacteria - 2717; Metazoa - 21; Fungi - 80; Plants - 57; Viruses - 0; Other Eukaryotes - 286 (source: NCBI BLink). & (gnl|cdd|30892 : 84.4) no description available & (reliability: 720.0) & (original description: Putative At2g33255, Description = Haloacid dehalogenase-like hydrolase domain-containing protein At2g33255, PFAM = PF13419)' T '35.1' 'not assigned.no ontology' 'niben101scf08478_635798-640418' '(at4g13600 : 147.0) Carbohydrate-binding X8 domain superfamily protein; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: plasmodesmata callose-binding protein 3 (TAIR:AT1G18650.1); Has 487 Blast hits to 485 proteins in 21 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 8; Plants - 474; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87420 : 118.0) no description available & (p52409|e13b_wheat : 84.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 294.0) & (original description: Putative BnaA04g06770D, Description = BnaA04g06770D protein, PFAM = PF07983)' T '35.1' 'not assigned.no ontology' 'niben101scf08479_152886-156272' '(at1g17200 : 223.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: protein binding; INVOLVED IN: response to karrikin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT3G14380.1). & (gnl|cdd|68120 : 117.0) no description available & (reliability: 446.0) & (original description: Putative f15, Description = CASP-like protein, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf08516_51223-54962' '(at1g80630 : 291.0) RNI-like superfamily protein; BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT4G15475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39542 : 83.9) no description available & (reliability: 582.0) & (original description: Putative , Description = , PFAM = PF13516;PF00646)' T '35.1' 'not assigned.no ontology' 'niben101scf08526_524750-534321' '(at4g09670 : 483.0) Oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase, N-terminal (InterPro:IPR000683), Oxidoreductase, C-terminal (InterPro:IPR004104), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: Glyceraldehyde-3-phosphate dehydrogenase-like family protein (TAIR:AT1G34200.1); Has 17148 Blast hits to 17147 proteins in 2160 species: Archae - 344; Bacteria - 12203; Metazoa - 250; Fungi - 605; Plants - 99; Viruses - 0; Other Eukaryotes - 3647 (source: NCBI BLink). & (gnl|cdd|37952 : 338.0) no description available & (gnl|cdd|31017 : 153.0) no description available & (reliability: 966.0) & (original description: Putative At4g09670, Description = Uncharacterized oxidoreductase At4g09670, PFAM = PF01408)' T '35.1' 'not assigned.no ontology' 'niben101scf08535_164999-177322' '(at5g35560 : 912.0) DENN (AEX-3) domain-containing protein; CONTAINS InterPro DOMAIN/s: uDENN (InterPro:IPR005113), dDENN (InterPro:IPR005112), DENN (InterPro:IPR001194); BEST Arabidopsis thaliana protein match is: DENN (AEX-3) domain-containing protein (TAIR:AT2G20320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85886 : 82.2) no description available & (gnl|cdd|38777 : 81.9) no description available & (reliability: 1824.0) & (original description: Putative MTR_2g041470, Description = DENN (AEX-3) domain protein, PFAM = PF03456;PF02141)' T '35.1' 'not assigned.no ontology' 'niben101scf08535_375315-378211' '(at2g31670 : 239.0) Stress responsive alpha-beta barrel domain protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: peroxisome, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Stress responsive alpha-beta barrel (InterPro:IPR013097), Dimeric alpha-beta barrel (InterPro:IPR011008); BEST Arabidopsis thaliana protein match is: dimeric A/B barrel domainS-protein 1 (TAIR:AT1G51360.1); Has 222 Blast hits to 216 proteins in 57 species: Archae - 0; Bacteria - 79; Metazoa - 0; Fungi - 4; Plants - 128; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 478.0) & (original description: Putative UP3, Description = AtDabb1, PFAM = PF07876;PF07876)' T '35.1' 'not assigned.no ontology' 'niben101scf08566_672262-680216' '(at5g64170 : 106.0) dentin sialophosphoprotein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54500.2); Has 181 Blast hits to 169 proteins in 40 species: Archae - 2; Bacteria - 18; Metazoa - 17; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative LNK1, Description = Night light-inducible and clock-regulated 1, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf08579_183139-201301' '(at1g31780 : 945.0) CONTAINS InterPro DOMAIN/s: Conserved oligomeric complex COG6 (InterPro:IPR010490); Has 384 Blast hits to 379 proteins in 190 species: Archae - 0; Bacteria - 4; Metazoa - 151; Fungi - 156; Plants - 42; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|69913 : 621.0) no description available & (gnl|cdd|38962 : 618.0) no description available & (reliability: 1890.0) & (original description: Putative cog6, Description = Component of oligomeric golgi complex 6, PFAM = PF06419)' T '35.1' 'not assigned.no ontology' 'niben101scf08581_103044-109621' '(at5g14850 : 674.0) Alg9-like mannosyltransferase family; FUNCTIONS IN: mannosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: GPI anchor biosynthetic process, GPI anchor metabolic process; LOCATED IN: endoplasmic reticulum membrane, intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alg9-like mannosyltransferase (InterPro:IPR005599); Has 1101 Blast hits to 1081 proteins in 222 species: Archae - 0; Bacteria - 46; Metazoa - 380; Fungi - 409; Plants - 121; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink). & (gnl|cdd|36982 : 472.0) no description available & (gnl|cdd|86471 : 319.0) no description available & (reliability: 1348.0) & (original description: Putative Pigb, Description = GPI mannosyltransferase 3, PFAM = PF03901)' T '35.1' 'not assigned.no ontology' 'niben101scf08581_160023-162990' '(at1g11090 : 132.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G47630.1); Has 3873 Blast hits to 3868 proteins in 1106 species: Archae - 36; Bacteria - 2649; Metazoa - 131; Fungi - 140; Plants - 451; Viruses - 35; Other Eukaryotes - 431 (source: NCBI BLink). & (gnl|cdd|36668 : 101.0) no description available & (reliability: 264.0) & (original description: Putative At1g11090, Description = 25331-24357, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf08590_66607-71209' '(at5g53490 : 283.0) thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein.; Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid lumen; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentapeptide repeat (InterPro:IPR001646); BEST Arabidopsis thaliana protein match is: Pentapeptide repeat-containing protein (TAIR:AT1G12250.2). & (reliability: 566.0) & (original description: Putative TL17, Description = Thylakoid lumenal 17.4 kDa protein, chloroplastic, PFAM = PF13599)' T '35.1' 'not assigned.no ontology' 'niben101scf08590_162779-168162' '(at5g24320 : 580.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G53500.1); Has 26091 Blast hits to 16604 proteins in 671 species: Archae - 60; Bacteria - 5328; Metazoa - 9578; Fungi - 5238; Plants - 2794; Viruses - 3; Other Eukaryotes - 3090 (source: NCBI BLink). & (gnl|cdd|35504 : 538.0) no description available & (gnl|cdd|29257 : 123.0) no description available & (reliability: 1160.0) & (original description: Putative At5g24320, Description = Transducin/WD40 domain-containing protein, PFAM = PF00400;PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf08653_406688-411266' '(at2g01190 : 268.0) Octicosapeptide/Phox/Bem1p family protein; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT3G18230.1); Has 5347 Blast hits to 4615 proteins in 344 species: Archae - 4; Bacteria - 100; Metazoa - 2308; Fungi - 1293; Plants - 931; Viruses - 29; Other Eukaryotes - 682 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative At2g01190, Description = Expressed protein, PFAM = PF00564)' T '35.1' 'not assigned.no ontology' 'niben101scf08653_838849-871312' '(at1g18270 : 1869.0) ketose-bisphosphate aldolase class-II family protein; FUNCTIONS IN: in 8 functions; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, valine metabolic process, glycolysis, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), Ketose-bisphosphate aldolase, class-II (InterPro:IPR000771), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), Protein of unknown function, DUF1537 (InterPro:IPR010737), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyisobutyrate dehydrogenase-related, conserved site (InterPro:IPR002204); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT4G20930.1). & (gnl|cdd|35630 : 312.0) no description available & (gnl|cdd|29573 : 312.0) no description available & (reliability: 3738.0) & (original description: Putative gatY, Description = D-tagatose-1,6-bisphosphate aldolase subunit GatY, PFAM = PF03446;PF03446;PF07005;PF01116;PF17042;PF14833;PF14833)' T '35.1' 'not assigned.no ontology' 'niben101scf08680_187628-190377' '(at5g39360 : 424.0) EID1-like 2 (EDL2); BEST Arabidopsis thaliana protein match is: EID1-like 1 (TAIR:AT5G15440.1); Has 126 Blast hits to 118 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 126; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 848.0) & (original description: Putative EDL3, Description = EID1-like F-box protein 3, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf08690_116374-122539' '(at3g49210 : 491.0) O-acyltransferase (WSD1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: O-acyltransferase, WSD1, C-terminal (InterPro:IPR009721), O-acyltransferase, WSD1, N-terminal (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT3G49200.1); Has 1044 Blast hits to 1032 proteins in 166 species: Archae - 2; Bacteria - 797; Metazoa - 8; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|70441 : 236.0) no description available & (reliability: 940.0) & (original description: Putative WSD1, Description = O-acyltransferase WSD1, PFAM = PF06974;PF03007)' T '35.1' 'not assigned.no ontology' 'niben101scf08690_261781-264882' '(at1g64450 : 109.0) Glycine-rich protein family; BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT4G23930.1); Has 61689 Blast hits to 17372 proteins in 1170 species: Archae - 25; Bacteria - 6104; Metazoa - 45491; Fungi - 2077; Plants - 2819; Viruses - 1028; Other Eukaryotes - 4145 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative PGSC0003DMG400000115, Description = Late embryogenesis abundant hydroxyproline-rich glycoprotein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf08711_172367-174810' '(at1g50720 : 124.0) Stigma-specific Stig1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Stigma-specific protein Stig1 (InterPro:IPR006969); BEST Arabidopsis thaliana protein match is: Stigma-specific Stig1 family protein (TAIR:AT5G55110.1); Has 305 Blast hits to 197 proteins in 35 species: Archae - 0; Bacteria - 106; Metazoa - 1; Fungi - 34; Plants - 157; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|68459 : 90.8) no description available & (reliability: 248.0) & (original description: Putative At1g50720, Description = Stigma-specific STIG1-like protein 3, PFAM = PF04885)' T '35.1' 'not assigned.no ontology' 'niben101scf08721_67227-72875' '(at5g07910 : 280.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30105.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35693 : 107.0) no description available & (reliability: 560.0) & (original description: Putative IRL7, Description = Plant intracellular Ras-group-related LRR protein 7, PFAM = PF13855)' T '35.1' 'not assigned.no ontology' 'niben101scf08772_38131-66400' '(at3g52950 : 682.0) CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein (TAIR:AT2G36500.1). & (gnl|cdd|73087 : 153.0) no description available & (reliability: 1364.0) & (original description: Putative CBSCBSPB3, Description = CBS domain-containing protein CBSCBSPB3, PFAM = PF00571;PF00571;PF00571;PF00571;PF00564)' T '35.1' 'not assigned.no ontology' 'niben101scf08804_427979-458567' '(at1g80630 : 222.0) RNI-like superfamily protein; BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT4G15475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39542 : 93.1) no description available & (reliability: 444.0) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'niben101scf08871_7611-21151' '(at5g65290 : 928.0) LMBR1-like membrane protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: LMBR1-like membrane protein, conserved region (InterPro:IPR006876); Has 378 Blast hits to 361 proteins in 164 species: Archae - 0; Bacteria - 1; Metazoa - 119; Fungi - 103; Plants - 62; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|37507 : 544.0) no description available & (gnl|cdd|86725 : 82.3) no description available & (reliability: 1856.0) & (original description: Putative Sb04g027320, Description = Putative uncharacterized protein Sb04g027320, PFAM = PF04791)' T '35.1' 'not assigned.no ontology' 'niben101scf08892_44293-51499' '(at1g05720 : 228.0) selenoprotein family protein; FUNCTIONS IN: selenium binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sep15/SelM redox (InterPro:IPR014912); Has 200 Blast hits to 200 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 137; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|38594 : 169.0) no description available & (gnl|cdd|87662 : 99.0) no description available & (reliability: 456.0) & (original description: Putative BcSep15, Description = Putative 15kDa selenoprotein, PFAM = PF08806)' T '35.1' 'not assigned.no ontology' 'niben101scf08926_739429-742550' '(at3g08640 : 358.0) Protein of unknown function (DUF3411); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3411) (TAIR:AT3G08630.1); Has 11715 Blast hits to 4977 proteins in 490 species: Archae - 4; Bacteria - 2620; Metazoa - 4563; Fungi - 550; Plants - 2459; Viruses - 100; Other Eukaryotes - 1419 (source: NCBI BLink). & (reliability: 716.0) & (original description: Putative Sb06g031280, Description = Putative uncharacterized protein Sb06g031280, PFAM = PF11891)' T '35.1' 'not assigned.no ontology' 'niben101scf08936_494122-508424' '(at4g24970 : 716.0) Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; FUNCTIONS IN: ATP binding; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (TAIR:AT5G50780.1); Has 769 Blast hits to 718 proteins in 131 species: Archae - 4; Bacteria - 82; Metazoa - 313; Fungi - 18; Plants - 223; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|37056 : 478.0) no description available & (reliability: 1374.0) & (original description: Putative MORC4, Description = Protein MICRORCHIDIA 4, PFAM = PF13589)' T '35.1' 'not assigned.no ontology' 'niben101scf08936_669097-675563' '(at5g41040 : 642.0) Encodes a feruloyl-CoA transferase required for suberin synthesis. Has feruloyl-CoA-dependent feruloyl transferase activity towards substrates with a primary alcohol.; HXXXD-type acyl-transferase family protein; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G63560.1); Has 2973 Blast hits to 2952 proteins in 200 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 233; Plants - 2730; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|66174 : 333.0) no description available & (o24645|hcbt1_diaca : 219.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1284.0) & (original description: Putative HHT1, Description = Omega-hydroxypalmitate O-feruloyl transferase, PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'niben101scf08975_4020-10929' '(at3g08990 : 190.0) Yippee family putative zinc-binding protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: Yippee family putative zinc-binding protein (TAIR:AT2G40110.1). & (p59234|yipl_soltu : 189.0) Protein yippee-like - Solanum tuberosum (Potato) & (gnl|cdd|38609 : 166.0) no description available & (gnl|cdd|66871 : 130.0) no description available & (reliability: 380.0) & (original description: Putative ypel, Description = Protein yippee-like, PFAM = PF03226)' T '35.1' 'not assigned.no ontology' 'niben101scf08977_43521-46942' '(at1g49320 : 241.0) Encodes USPL1, a BURP domain protein targeted to the protein storage vacuoles. Overexpression of USPL1 affects seed development, protein storage vacuoles and lipid vesicles morphology and function.; unknown seed protein like 1 (USPL1); CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: BURP domain-containing protein (TAIR:AT5G25610.1); Has 493 Blast hits to 491 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 493; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66831 : 231.0) no description available & (reliability: 482.0) & (original description: Putative USPL1, Description = BURP domain protein USPL1, PFAM = PF03181)' T '35.1' 'not assigned.no ontology' 'niben101scf09010_525339-530496' '(at4g38650 : 650.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 10 protein (TAIR:AT4G38300.1); Has 2063 Blast hits to 2053 proteins in 438 species: Archae - 10; Bacteria - 1176; Metazoa - 20; Fungi - 357; Plants - 277; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (gnl|cdd|47910 : 220.0) no description available & (reliability: 1300.0) & (original description: Putative xyn3, Description = Xylanase 3, PFAM = PF00331)' T '35.1' 'not assigned.no ontology' 'niben101scf09014_131196-134428' '(at3g12400 : 402.0) Mutants of this gene were initially identified because of the trichome morphogenesis phenotype. Those trichomes have multiple nuclei, a defect that turns out not to be restricted to the trichomes but also in all endoreduplicating cell types. This gene encodes a ubiquitin-binding protein with sequence similarities with yeast proteins that are components of the ESCRTI-III complexes. The Arabidopsis protein is found associated with the endosome.; ELC; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Tumour susceptibility gene 101 (InterPro:IPR008883), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), Steadiness box (InterPro:IPR017916); BEST Arabidopsis thaliana protein match is: ELCH-like (TAIR:AT5G13860.1); Has 587 Blast hits to 537 proteins in 178 species: Archae - 0; Bacteria - 3; Metazoa - 278; Fungi - 177; Plants - 63; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|37602 : 340.0) no description available & (gnl|cdd|86940 : 138.0) no description available & (reliability: 794.0) & (original description: Putative ELC, Description = Protein ELC, PFAM = PF09454;PF05743)' T '35.1' 'not assigned.no ontology' 'niben101scf09021_14247-23006' '(at4g22990 : 932.0) Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein (TAIR:AT4G11810.1). & (gnl|cdd|37536 : 277.0) no description available & (gnl|cdd|66759 : 110.0) no description available & (reliability: 1864.0) & (original description: Putative PGSC0003DMG400000003, Description = SPX domain-containing membrane protein, PFAM = PF07690;PF03105;PF03105)' T '35.1' 'not assigned.no ontology' 'niben101scf09025_220549-230294' '(gnl|cdd|37547 : 579.0) no description available & (at1g05350 : 571.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, catalytic activity, cofactor binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: SUMO-activating enzyme 2 (TAIR:AT2G21470.1); Has 12729 Blast hits to 12531 proteins in 2437 species: Archae - 211; Bacteria - 8204; Metazoa - 1010; Fungi - 713; Plants - 367; Viruses - 0; Other Eukaryotes - 2224 (source: NCBI BLink). & (gnl|cdd|30111 : 219.0) no description available & (reliability: 1142.0) & (original description: Putative uba5, Description = Ubiquitin-like modifier-activating enzyme 5, PFAM = PF00899)' T '35.1' 'not assigned.no ontology' 'niben101scf09028_14885-18195' '(at1g48540 : 86.3) Outer arm dynein light chain 1 protein; BEST Arabidopsis thaliana protein match is: Outer arm dynein light chain 1 protein (TAIR:AT3G17920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative PGSC0003DMG400005676, Description = Outer arm dynein light chain 1, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf09063_121476-129560' '(at2g13690 : 492.0) PRLI-interacting factor, putative; BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT5G60050.1); Has 259 Blast hits to 259 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 259; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 984.0) & (original description: Putative F13J11, Description = BTB/POZ domain-containing protein At2g13690, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf09074_139087-149377' '(at2g30630 : 701.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cell killing; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, flower, pollen tube; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zeta toxin (InterPro:IPR010488); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G06750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1402.0) & (original description: Putative At1g06750, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF06414)' T '35.1' 'not assigned.no ontology' 'niben101scf09107_24237-29049' '(at5g61250 : 553.0) Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-β-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be secreted.; glucuronidase 1 (GUS1); FUNCTIONS IN: beta-glucuronidase activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 79, N-terminal (InterPro:IPR005199); BEST Arabidopsis thaliana protein match is: glucuronidase 2 (TAIR:AT5G07830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|67288 : 363.0) no description available & (reliability: 1106.0) & (original description: Putative SGUS, Description = Baicalin-beta-D-glucuronidase, PFAM = PF03662)' T '35.1' 'not assigned.no ontology' 'niben101scf09140_109633-113069' '(at1g51538 : 297.0) Aminotransferase-like, plant mobile domain family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G50830.1); Has 1047 Blast hits to 1018 proteins in 89 species: Archae - 0; Bacteria - 9; Metazoa - 109; Fungi - 28; Plants - 745; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 594.0) & (original description: Putative At1g50830, Description = Aminotransferase-like, plant mobile domain family protein, PFAM = PF10536)' T '35.1' 'not assigned.no ontology' 'niben101scf09141_250427-259309' '(at2g38480 : 135.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G36330.1); Has 221 Blast hits to 221 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 221; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative At2g38480, Description = CASP-like protein 4B1, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf09141_331008-337470' '(at5g01650 : 192.0) Tautomerase/MIF superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: inflammatory response, response to other organism; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tautomerase (InterPro:IPR014347), Macrophage migration inhibitory factor (InterPro:IPR001398); BEST Arabidopsis thaliana protein match is: Tautomerase/MIF superfamily protein (TAIR:AT5G57170.2); Has 820 Blast hits to 820 proteins in 207 species: Archae - 0; Bacteria - 141; Metazoa - 384; Fungi - 26; Plants - 141; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|36970 : 143.0) no description available & (gnl|cdd|85294 : 81.5) no description available & (reliability: 384.0) & (original description: Putative PGSC0003DMG400015887, Description = Light-inducible protein ATLS1, PFAM = PF01187)' T '35.1' 'not assigned.no ontology' 'niben101scf09142_5942-56937' '(at2g03510 : 521.0) SPFH/Band 7/PHB domain-containing membrane-associated protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); Has 1337 Blast hits to 1335 proteins in 540 species: Archae - 4; Bacteria - 923; Metazoa - 173; Fungi - 0; Plants - 41; Viruses - 8; Other Eukaryotes - 188 (source: NCBI BLink). & (gnl|cdd|38173 : 469.0) no description available & (gnl|cdd|48218 : 467.0) no description available & (reliability: 1042.0) & (original description: Putative ERLIN2, Description = Erlin-2, PFAM = PF01145)' T '35.1' 'not assigned.no ontology' 'niben101scf09185_38178-46705' '(gnl|cdd|36622 : 454.0) no description available & (at3g09080 : 360.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 14743 Blast hits to 9426 proteins in 454 species: Archae - 42; Bacteria - 3876; Metazoa - 4498; Fungi - 2945; Plants - 1499; Viruses - 0; Other Eukaryotes - 1883 (source: NCBI BLink). & (gnl|cdd|29257 : 82.7) no description available & (reliability: 720.0) & (original description: Putative BnaAnng24510D, Description = BnaAnng24510D protein, PFAM = PF00400;PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf09192_343551-362989' '(at2g33205 : 539.0) Serinc-domain containing serine and sphingolipid biosynthesis protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: TMS membrane protein/tumour differentially expressed protein (InterPro:IPR005016); BEST Arabidopsis thaliana protein match is: Serinc-domain containing serine and sphingolipid biosynthesis protein (TAIR:AT3G24460.1); Has 814 Blast hits to 786 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 443; Fungi - 138; Plants - 166; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|37803 : 190.0) no description available & (gnl|cdd|66988 : 177.0) no description available & (reliability: 1078.0) & (original description: Putative DIR16, Description = Dirigent protein 16, PFAM = PF03348;PF03018)' T '35.1' 'not assigned.no ontology' 'niben101scf09248_637187-643415' '(at3g51730 : 177.0) saposin B domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Saposin B (InterPro:IPR008139), Saposin-like (InterPro:IPR011001), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138); BEST Arabidopsis thaliana protein match is: saposin B domain-containing protein (TAIR:AT5G01800.1); Has 951 Blast hits to 460 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 738; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|36554 : 103.0) no description available & (reliability: 354.0) & (original description: Putative POPTR_0006s10790g, Description = Saposin B domain-containing family protein, PFAM = PF05184;PF05184;PF03489)' T '35.1' 'not assigned.no ontology' 'niben101scf09284_127611-132028' '(at2g38740 : 335.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G56500.1); Has 17978 Blast hits to 17978 proteins in 2581 species: Archae - 265; Bacteria - 14433; Metazoa - 167; Fungi - 429; Plants - 387; Viruses - 3; Other Eukaryotes - 2294 (source: NCBI BLink). & (gnl|cdd|30982 : 141.0) no description available & (gnl|cdd|38125 : 129.0) no description available & (reliability: 670.0) & (original description: Putative SGPP, Description = Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp, PFAM = PF13419)' T '35.1' 'not assigned.no ontology' 'niben101scf09363_35572-40761' '(at3g16310 : 371.0) mitotic phosphoprotein N' end (MPPN) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: MPPN (InterPro:IPR007846), Nucleoporin, NUP53 (InterPro:IPR017389); Has 220 Blast hits to 220 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 5; Plants - 57; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|39486 : 195.0) no description available & (gnl|cdd|68734 : 116.0) no description available & (reliability: 742.0) & (original description: Putative NUP35, Description = Nuclear pore complex protein NUP35, PFAM = PF05172)' T '35.1' 'not assigned.no ontology' 'niben101scf09403_5799-10277' '(at3g62810 : 103.0) complex 1 family protein / LVR family protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative , Description = , PFAM = PF05347)' T '35.1' 'not assigned.no ontology' 'niben101scf09403_71016-76906' '(at3g62860 : 531.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G47630.1); Has 2895 Blast hits to 2893 proteins in 1018 species: Archae - 30; Bacteria - 1827; Metazoa - 110; Fungi - 120; Plants - 454; Viruses - 49; Other Eukaryotes - 305 (source: NCBI BLink). & (gnl|cdd|36668 : 420.0) no description available & (gnl|cdd|32448 : 136.0) no description available & (reliability: 1062.0) & (original description: Putative At3g62860, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'niben101scf09459_17784-24675' '(at3g24160 : 232.0) Encodes a putative Type 1 membrane protein (PMP).; putative type 1 membrane protein (PMP); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 464.0) & (original description: Putative PMP, Description = AT3g24160/MUJ8_16, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf09475_41642-69172' '(at1g19100 : 629.0) Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (TAIR:AT4G36280.1); Has 533 Blast hits to 518 proteins in 94 species: Archae - 0; Bacteria - 53; Metazoa - 227; Fungi - 0; Plants - 195; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|37056 : 270.0) no description available & (reliability: 1258.0) & (original description: Putative MORC6, Description = Protein MICRORCHIDIA 6, PFAM = PF13589)' T '35.1' 'not assigned.no ontology' 'niben101scf09523_284842-291347' '(at3g58830 : 307.0) haloacid dehalogenase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIIA (InterPro:IPR006549), Protein of unknown function DUF2010 (InterPro:IPR019001), HAD-superfamily phosphatase, subfamily IIIA (InterPro:IPR010021); Has 1169 Blast hits to 1165 proteins in 593 species: Archae - 0; Bacteria - 976; Metazoa - 0; Fungi - 84; Plants - 42; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|38172 : 206.0) no description available & (gnl|cdd|87964 : 165.0) no description available & (reliability: 614.0) & (original description: Putative Os01g0796500, Description = Os01g0796500 protein, PFAM = PF09419)' T '35.1' 'not assigned.no ontology' 'niben101scf09548_2315-6863' '(at5g14910 : 117.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative At5g14910, Description = AT5g14910/F2G14_30, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf09548_40812-50799' '(at3g01380 : 1316.0) transferases;sulfuric ester hydrolases;catalytics;transferases; FUNCTIONS IN: sulfuric ester hydrolase activity, transferase activity, catalytic activity; INVOLVED IN: GPI anchor biosynthetic process, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GPI ethanolamine phosphate transferase 1, C-terminal (InterPro:IPR017852), Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), GPI ethanolamine phosphate transferase 1 (InterPro:IPR007070), Alkaline-phosphatase-like, core domain (InterPro:IPR017850), Sulfatase (InterPro:IPR000917); Has 1139 Blast hits to 1068 proteins in 222 species: Archae - 0; Bacteria - 85; Metazoa - 475; Fungi - 399; Plants - 79; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (gnl|cdd|37335 : 826.0) no description available & (gnl|cdd|86764 : 294.0) no description available & (reliability: 2632.0) & (original description: Putative At3g01380, Description = Sulfatase and phosphatidylinositolglycan class N domain-containing protein, PFAM = PF04987;PF01663)' T '35.1' 'not assigned.no ontology' 'niben101scf09552_130663-134410' '(at5g49920 : 164.0) Octicosapeptide/Phox/Bem1p family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT3G46920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative At1g16270, Description = Phox/Bem1p, PFAM = PF00564)' T '35.1' 'not assigned.no ontology' 'niben101scf09560_35010-40498' '(at1g10155 : 105.0) phloem protein 2-A10 (PP2-A10); BEST Arabidopsis thaliana protein match is: phloem protein 2-A9 (TAIR:AT1G31200.1); Has 113 Blast hits to 113 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 199.6) & (original description: Putative , Description = , PFAM = PF14299)' T '35.1' 'not assigned.no ontology' 'niben101scf09582_195534-199436' '(at5g56170 : 154.0) LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 (LLG1); BEST Arabidopsis thaliana protein match is: lorelei (TAIR:AT4G26466.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative gap, Description = Putative GPI-anchored protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf09589_81245-84495' '(at3g17640 : 325.0) Leucine-rich repeat (LRR) family protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G03440.1); Has 49064 Blast hits to 19347 proteins in 858 species: Archae - 12; Bacteria - 2546; Metazoa - 6658; Fungi - 321; Plants - 36853; Viruses - 0; Other Eukaryotes - 2674 (source: NCBI BLink). & (p93194|rpk1_iponi : 97.4) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 650.0) & (original description: Putative At3g17640, Description = Leucine-rich repeat disease resistance protein-like, PFAM = PF08263;PF13855)' T '35.1' 'not assigned.no ontology' 'niben101scf09628_20866-25010' '(at5g62030 : 598.0) diphthamide synthesis DPH2 family protein; CONTAINS InterPro DOMAIN/s: Diphthamide synthesis, DHP1 (InterPro:IPR016435), Diphthamide synthesis, DPH1/DHP2 (InterPro:IPR002728); BEST Arabidopsis thaliana protein match is: diphthamide synthesis DPH2 family protein (TAIR:AT3G59630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37859 : 448.0) no description available & (gnl|cdd|85730 : 314.0) no description available & (reliability: 1196.0) & (original description: Putative dph1, Description = Diphthamide biosynthesis protein 1, PFAM = PF01866)' T '35.1' 'not assigned.no ontology' 'niben101scf09629_73516-88890' '(at1g54380 : 238.0) spliceosome protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Survival motor neuron interacting protein 1 (InterPro:IPR007022); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42510.2); Has 222 Blast hits to 205 proteins in 80 species: Archae - 0; Bacteria - 6; Metazoa - 98; Fungi - 6; Plants - 54; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|68509 : 160.0) no description available & (reliability: 476.0) & (original description: Putative PGSC0003DMG400021611, Description = Survival motor neuron containing protein, PFAM = PF04938)' T '35.1' 'not assigned.no ontology' 'niben101scf09640_150937-156619' '(at1g15330 : 375.0) Cystathionine beta-synthase (CBS) protein; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT1G80090.1); Has 526 Blast hits to 526 proteins in 132 species: Archae - 6; Bacteria - 4; Metazoa - 257; Fungi - 91; Plants - 124; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|36975 : 150.0) no description available & (gnl|cdd|73140 : 112.0) no description available & (reliability: 750.0) & (original description: Putative PV42A, Description = SNF1-related protein kinase regulatory subunit gamma-like PV42a, PFAM = PF00571)' T '35.1' 'not assigned.no ontology' 'niben101scf09659_246352-259861' '(at5g19820 : 995.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37382 : 693.0) no description available & (reliability: 1990.0) & (original description: Putative Os03g0701000, Description = Os03g0701000 protein, PFAM = PF02985;PF12755)' T '35.1' 'not assigned.no ontology' 'niben101scf09670_28699-36046' '(at3g59630 : 547.0) diphthamide synthesis DPH2 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: peptidyl-diphthamide biosynthetic process from peptidyl-histidine; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Diphthamide synthesis, DPH1/DHP2 (InterPro:IPR002728), Diphthamide synthesis, DHP2 (InterPro:IPR010014); BEST Arabidopsis thaliana protein match is: diphthamide synthesis DPH2 family protein (TAIR:AT5G62030.1); Has 995 Blast hits to 948 proteins in 287 species: Archae - 127; Bacteria - 0; Metazoa - 243; Fungi - 308; Plants - 94; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (gnl|cdd|37859 : 341.0) no description available & (gnl|cdd|85730 : 188.0) no description available & (reliability: 1094.0) & (original description: Putative Os11g0265600, Description = Diphthamide biosynthesis protein 2, PFAM = PF01866)' T '35.1' 'not assigned.no ontology' 'niben101scf09709_37358-43371' '(at5g11650 : 513.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G73480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36668 : 321.0) no description available & (gnl|cdd|32448 : 166.0) no description available & (reliability: 1026.0) & (original description: Putative Sb03g002710, Description = Putative uncharacterized protein Sb03g002710, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'niben101scf09709_40931-43387' '(at5g11650 : 165.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G73480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36668 : 99.6) no description available & (reliability: 330.0) & (original description: Putative CSE16, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'niben101scf09767_92563-97162' '(at5g12460 : 401.0) Protein of unknown function (DUF604); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT2G37730.1); Has 562 Blast hits to 553 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 108; Fungi - 170; Plants - 273; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|68226 : 236.0) no description available & (gnl|cdd|37457 : 173.0) no description available & (reliability: 802.0) & (original description: Putative BnaC09g44280D, Description = BnaC09g44280D protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben101scf10036_446129-456722' '(at1g15240 : 863.0) Phox-associated domain;Phox-like;Sorting nexin, C-terminal; CONTAINS InterPro DOMAIN/s: PX-associated, sorting nexin 13 (InterPro:IPR013996), Sorting nexin, C-terminal (InterPro:IPR013937), Phox-like (InterPro:IPR001683), Phox-associated domain (InterPro:IPR003114); BEST Arabidopsis thaliana protein match is: Phox-associated domain;Phox-like;Sorting nexin, C-terminal (TAIR:AT2G15900.1). & (reliability: 1726.0) & (original description: Putative BnaC08g38980D, Description = BnaC08g38980D protein, PFAM = PF08628;PF02194;PF00787)' T '35.1' 'not assigned.no ontology' 'niben101scf10053_123065-128840' '(at5g27490 : 406.0) Integral membrane Yip1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Yip1 domain (InterPro:IPR006977); BEST Arabidopsis thaliana protein match is: Integral membrane Yip1 family protein (TAIR:AT3G05280.1); Has 530 Blast hits to 529 proteins in 180 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 113; Plants - 90; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (gnl|cdd|38324 : 224.0) no description available & (gnl|cdd|86741 : 103.0) no description available & (reliability: 812.0) & (original description: Putative PGSC0003DMG400028610, Description = Protein YIPF, PFAM = PF04893)' T '35.1' 'not assigned.no ontology' 'niben101scf10055_966190-969479' '(gnl|cdd|66174 : 241.0) no description available & (at3g26040 : 237.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 2415 Blast hits to 2403 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 2353; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (o24645|hcbt1_diaca : 96.7) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 474.0) & (original description: Putative RCOM_1507260, Description = Anthranilate N-benzoyltransferase protein, putative, PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'niben101scf10065_80100-101751' '(at4g24970 : 103.0) Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; FUNCTIONS IN: ATP binding; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (TAIR:AT5G50780.1); Has 769 Blast hits to 718 proteins in 131 species: Archae - 4; Bacteria - 82; Metazoa - 313; Fungi - 18; Plants - 223; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative glysoja_003061, Description = MORC family CW-type zinc finger protein 3, PFAM = PF07496;PF13589)' T '35.1' 'not assigned.no ontology' 'niben101scf10086_453966-462589' '(at5g11540 : 748.0) D-arabinono-1,4-lactone oxidase family protein; FUNCTIONS IN: D-arabinono-1,4-lactone oxidase activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: D-arabinono-1,4-lactone oxidase (InterPro:IPR007173), FAD-binding, type 2 (InterPro:IPR016166), Plant-specific FAD-dependent oxidoreductase (InterPro:IPR010030), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: D-arabinono-1,4-lactone oxidase family protein (TAIR:AT2G46740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39928 : 526.0) no description available & (gnl|cdd|30625 : 100.0) no description available & (reliability: 1496.0) & (original description: Putative GULLO3, Description = L-gulonolactone oxidase 3, PFAM = PF01565;PF04030)' T '35.1' 'not assigned.no ontology' 'niben101scf10122_20350-23444' '(at5g05210 : 95.9) Surfeit locus protein 6; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Surfeit locus 6 (InterPro:IPR007019); BEST Arabidopsis thaliana protein match is: Surfeit locus protein 6 (TAIR:AT2G27750.1); Has 32234 Blast hits to 20830 proteins in 1371 species: Archae - 181; Bacteria - 3648; Metazoa - 13184; Fungi - 2634; Plants - 1078; Viruses - 135; Other Eukaryotes - 11374 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative BnaA03g55250D, Description = BnaA03g55250D protein, PFAM = PF04935;PF15459)' T '35.1' 'not assigned.no ontology' 'niben101scf10124_432301-449408' '(at4g32272 : 407.0) Nucleotide/sugar transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: UDP-N-acetylglucosamine (UAA) transporter family (TAIR:AT4G31600.1). & (gnl|cdd|36657 : 171.0) no description available & (reliability: 814.0) & (original description: Putative At4g32272, Description = Nucleotide/sugar transporter family protein, PFAM = PF03151)' T '35.1' 'not assigned.no ontology' 'niben101scf10150_659507-664060' '(at2g35605 : 116.0) SWIB/MDM2 domain superfamily protein; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121), SWIB domain (InterPro:IPR019835); BEST Arabidopsis thaliana protein match is: SWIB/MDM2 domain superfamily protein (TAIR:AT1G31760.1); Has 1125 Blast hits to 1022 proteins in 233 species: Archae - 0; Bacteria - 211; Metazoa - 71; Fungi - 192; Plants - 413; Viruses - 10; Other Eukaryotes - 228 (source: NCBI BLink). & (gnl|cdd|37157 : 114.0) no description available & (gnl|cdd|85905 : 114.0) no description available & (reliability: 232.0) & (original description: Putative pco097858, Description = SWIb domain-containing protein, PFAM = PF02201)' T '35.1' 'not assigned.no ontology' 'niben101scf10219_67723-79464' '(at1g29120 : 479.0) Hydrolase-like protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G25770.1). & (gnl|cdd|39573 : 200.0) no description available & (gnl|cdd|68625 : 200.0) no description available & (reliability: 958.0) & (original description: Putative At1g29120, Description = Hydrolase-like protein, PFAM = PF05057)' T '35.1' 'not assigned.no ontology' 'niben101scf10222_25773-31457' '(at4g23490 : 729.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT4G11350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68226 : 451.0) no description available & (gnl|cdd|37457 : 295.0) no description available & (reliability: 1458.0) & (original description: Putative BnaA01g13090D, Description = BnaA01g13090D protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben101scf10306_77447-97460' '(at5g26180 : 550.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G55920.1); Has 8801 Blast hits to 8742 proteins in 2315 species: Archae - 360; Bacteria - 6022; Metazoa - 655; Fungi - 388; Plants - 256; Viruses - 1; Other Eukaryotes - 1119 (source: NCBI BLink). & (gnl|cdd|37571 : 288.0) no description available & (gnl|cdd|30493 : 195.0) no description available & (reliability: 1100.0) & (original description: Putative NSUN5, Description = Probable 28S rRNA (cytosine-C(5))-methyltransferase, PFAM = PF01189)' T '35.1' 'not assigned.no ontology' 'niben101scf10309_3717-28447' '(at2g46760 : 795.0) D-arabinono-1,4-lactone oxidase family protein; FUNCTIONS IN: oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity, FAD binding, catalytic activity; INVOLVED IN: oxidation reduction; LOCATED IN: membrane; EXPRESSED IN: inflorescence meristem, sperm cell, hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: D-arabinono-1,4-lactone oxidase (InterPro:IPR007173), FAD-binding, type 2 (InterPro:IPR016166), Plant-specific FAD-dependent oxidoreductase (InterPro:IPR010030), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: D-arabinono-1,4-lactone oxidase family protein (TAIR:AT2G46750.1); Has 3782 Blast hits to 3623 proteins in 955 species: Archae - 27; Bacteria - 2759; Metazoa - 133; Fungi - 277; Plants - 266; Viruses - 0; Other Eukaryotes - 320 (source: NCBI BLink). & (gnl|cdd|39928 : 590.0) no description available & (gnl|cdd|30625 : 109.0) no description available & (reliability: 1590.0) & (original description: Putative GULLO6, Description = Probable L-gulonolactone oxidase 6, PFAM = PF04030;PF01565)' T '35.1' 'not assigned.no ontology' 'niben101scf10322_141262-144302' '(at5g15290 : 149.0) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT1G14160.1); Has 635 Blast hits to 635 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 635; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68120 : 110.0) no description available & (reliability: 298.0) & (original description: Putative CASP2, Description = CASP-like protein, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf10330_18492-30239' '(at5g02060 : 129.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT3G53850.1); Has 207 Blast hits to 207 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative At5g02060, Description = CASP-like protein 5B1, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf10354_39197-45504' '(at5g10810 : 163.0) enhancer of rudimentary homolog ATER; ENHANCER OF RUDIMENTARY HOMOLOGUE (ER); CONTAINS InterPro DOMAIN/s: Enhancer of rudimentary (InterPro:IPR000781); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|64968 : 145.0) no description available & (gnl|cdd|36977 : 130.0) no description available & (reliability: 326.0) & (original description: Putative erh, Description = Enhancer of rudimentary homolog, PFAM = PF01133)' T '35.1' 'not assigned.no ontology' 'niben101scf10374_38068-41880' '(at3g15420 : 101.0) Transcription factor TFIIIC, tau55-related protein; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIIC, tau55-related (InterPro:IPR019481); BEST Arabidopsis thaliana protein match is: Transcription factor TFIIIC, tau55-related protein (TAIR:AT1G80745.1); Has 31 Blast hits to 31 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative glysoja_001535, Description = Leucine-rich repeat-containing protein 40, PFAM = PF10419)' T '35.1' 'not assigned.no ontology' 'niben101scf10389_101030-107123' '(at3g57000 : 308.0) nucleolar essential protein-related; CONTAINS InterPro DOMAIN/s: Ribosomal biogenesis, methyltransferase, EMG1/NEP1 (InterPro:IPR005304); Has 1079 Blast hits to 938 proteins in 280 species: Archae - 143; Bacteria - 12; Metazoa - 353; Fungi - 181; Plants - 69; Viruses - 2; Other Eukaryotes - 319 (source: NCBI BLink). & (gnl|cdd|38283 : 267.0) no description available & (gnl|cdd|86374 : 170.0) no description available & (reliability: 616.0) & (original description: Putative Emg1, Description = Ribosomal RNA small subunit methyltransferase NEP1, PFAM = PF03587)' T '35.1' 'not assigned.no ontology' 'niben101scf10412_348800-353740' '(at2g15730 : 424.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G34420.1); Has 149 Blast hits to 147 proteins in 26 species: Archae - 0; Bacteria - 31; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 768.0) & (original description: Putative At2g15730, Description = At2g15730, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf10423_218272-223425' '(at1g05280 : 454.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT4G15240.1); Has 523 Blast hits to 513 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 61; Fungi - 172; Plants - 273; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|68226 : 339.0) no description available & (gnl|cdd|37457 : 241.0) no description available & (reliability: 908.0) & (original description: Putative BnaAnng16280D, Description = BnaAnng16280D protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben101scf10431_127598-148014' '(at5g09860 : 840.0) Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.; THO1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: production of ta-siRNAs involved in RNA interference, gene silencing by RNA; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: THO complex, subunit THOC1 (InterPro:IPR021861). & (gnl|cdd|37702 : 522.0) no description available & (reliability: 1680.0) & (original description: Putative THO1, Description = THO complex subunit 1, PFAM = PF11957)' T '35.1' 'not assigned.no ontology' 'niben101scf10431_140745-146077' '(at5g09860 : 227.0) Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.; THO1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: production of ta-siRNAs involved in RNA interference, gene silencing by RNA; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: THO complex, subunit THOC1 (InterPro:IPR021861). & (gnl|cdd|37702 : 169.0) no description available & (reliability: 454.0) & (original description: Putative EMU, Description = THO complex subunit 1, PFAM = PF11957)' T '35.1' 'not assigned.no ontology' 'niben101scf10434_572-4105' '(at5g64430 : 259.0) Octicosapeptide/Phox/Bem1p family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT5G09620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84866 : 83.8) no description available & (reliability: 518.0) & (original description: Putative At5g64430, Description = At5g64430, PFAM = PF00564)' T '35.1' 'not assigned.no ontology' 'niben101scf10464_123934-126665' '(at2g15730 : 263.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G34420.1); Has 149 Blast hits to 147 proteins in 26 species: Archae - 0; Bacteria - 31; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 478.0) & (original description: Putative Vigan.UMG138200, Description = Sulfotransferase, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf10476_539276-543331' '(at2g39445 : 162.0) Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: PIG-P (InterPro:IPR013717), Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit (InterPro:IPR016542); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit (TAIR:AT1G61280.1); Has 338 Blast hits to 338 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 138; Fungi - 94; Plants - 57; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|87549 : 123.0) no description available & (gnl|cdd|37468 : 121.0) no description available & (reliability: 324.0) & (original description: Putative At1g61280, Description = Phosphatidylinositol N-acetylglucosaminyltransferase subunit P, PFAM = PF08510)' T '35.1' 'not assigned.no ontology' 'niben101scf10519_258006-273428' '(at2g40190 : 704.0) Encodes a putative alpha-1,2-mannosyltransferase in N-linked glycoprotein (homologous to yeast ALG11). Plays vital roles in cell-wall biosynthesis and abiotic stress response. Located in endoplasmic reticulum membrane.; LEAF WILTING 3 (LEW3); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G78800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36601 : 480.0) no description available & (gnl|cdd|30787 : 93.5) no description available & (reliability: 1408.0) & (original description: Putative ALG11, Description = GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase, PFAM = PF15924;PF00534)' T '35.1' 'not assigned.no ontology' 'niben101scf10595_176089-182399' '(at1g12570 : 780.0) Glucose-methanol-choline (GMC) oxidoreductase family protein; FUNCTIONS IN: aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; INVOLVED IN: alcohol metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT5G51950.1); Has 10555 Blast hits to 10382 proteins in 1112 species: Archae - 4; Bacteria - 3926; Metazoa - 806; Fungi - 1507; Plants - 299; Viruses - 12; Other Eukaryotes - 4001 (source: NCBI BLink). & (gnl|cdd|36452 : 550.0) no description available & (gnl|cdd|32458 : 159.0) no description available & (reliability: 1560.0) & (original description: Putative HTH, Description = Protein HOTHEAD, PFAM = PF00732;PF05199)' T '35.1' 'not assigned.no ontology' 'niben101scf10595_204855-220822' '(at4g22990 : 1055.0) Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein (TAIR:AT4G11810.1). & (gnl|cdd|37536 : 308.0) no description available & (gnl|cdd|66759 : 118.0) no description available & (reliability: 2110.0) & (original description: Putative At4g22990, Description = SPX domain-containing membrane protein At4g22990, PFAM = PF07690;PF03105)' T '35.1' 'not assigned.no ontology' 'niben101scf10627_211700-224809' '(at5g21920 : 186.0) YLMG2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function YGGT (InterPro:IPR003425); BEST Arabidopsis thaliana protein match is: YGGT family protein (TAIR:AT4G27990.1). & (reliability: 372.0) & (original description: Putative YLMG2, Description = YlmG homolog protein 2, chloroplastic, PFAM = PF02325)' T '35.1' 'not assigned.no ontology' 'niben101scf10684_64494-72811' '(at1g03070 : 205.0) Bax inhibitor-1 family protein; FUNCTIONS IN: glutamate binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Inhibitor of apoptosis-promoting Bax1 related (InterPro:IPR006214); BEST Arabidopsis thaliana protein match is: Bax inhibitor-1 family protein (TAIR:AT4G02690.1). & (gnl|cdd|37533 : 152.0) no description available & (reliability: 410.0) & (original description: Putative BIL4, Description = BI1-like protein, PFAM = PF01027)' T '35.1' 'not assigned.no ontology' 'niben101scf10747_62676-104059' '(at5g13560 : 549.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37370.1); Has 12055 Blast hits to 8846 proteins in 811 species: Archae - 217; Bacteria - 1046; Metazoa - 6104; Fungi - 1115; Plants - 528; Viruses - 14; Other Eukaryotes - 3031 (source: NCBI BLink). & (reliability: 1098.0) & (original description: Putative At5g13560, Description = At5g13560, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf10885_52187-55065' '(at1g17070 : 185.0) GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tuftelin interacting protein N-terminal (InterPro:IPR022159), D111/G-patch (InterPro:IPR000467); BEST Arabidopsis thaliana protein match is: GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain (TAIR:AT2G42330.2); Has 1264 Blast hits to 1232 proteins in 250 species: Archae - 2; Bacteria - 6; Metazoa - 735; Fungi - 146; Plants - 190; Viruses - 1; Other Eukaryotes - 184 (source: NCBI BLink). & (gnl|cdd|37395 : 108.0) no description available & (reliability: 370.0) & (original description: Putative stip, Description = Tuftelin-interacting protein 11, PFAM = PF01585;PF12457)' T '35.1' 'not assigned.no ontology' 'niben101scf10900_45746-57111' '(at2g36360 : 431.0) Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G74150.1). & (gnl|cdd|35600 : 183.0) no description available & (reliability: 862.0) & (original description: Putative BnaA05g07880D, Description = BnaA05g07880D protein, PFAM = PF13415;PF13415)' T '35.1' 'not assigned.no ontology' 'niben101scf10968_355245-360048' '(at5g13070 : 306.0) MSF1-like family protein; CONTAINS InterPro DOMAIN/s: PRELI/MSF1 (InterPro:IPR006797); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38546 : 210.0) no description available & (gnl|cdd|68285 : 158.0) no description available & (reliability: 612.0) & (original description: Putative Sb04g029800, Description = Putative uncharacterized protein Sb04g029800, PFAM = PF04707)' T '35.1' 'not assigned.no ontology' 'niben101scf11108_369728-382898' '(at5g12040 : 529.0) Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein; FUNCTIONS IN: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, zinc ion binding; INVOLVED IN: nitrogen compound metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010); BEST Arabidopsis thaliana protein match is: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein (TAIR:AT4G08790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36024 : 321.0) no description available & (gnl|cdd|30737 : 209.0) no description available & (q93xi4|agub_orysa : 84.3) N-carbamoylputrescine amidase (EC 3.5.1.53) - Oryza sativa (Rice) & (reliability: 1058.0) & (original description: Putative NLP3, Description = Omega-amidase, chloroplastic, PFAM = PF00795)' T '35.1' 'not assigned.no ontology' 'niben101scf11124_117944-126022' '(at3g07170 : 149.0) Sterile alpha motif (SAM) domain-containing protein; CONTAINS InterPro DOMAIN/s: Sterile alpha motif (InterPro:IPR001660), Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 1 (InterPro:IPR021129); BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT5G48680.1); Has 516 Blast hits to 515 proteins in 77 species: Archae - 0; Bacteria - 10; Metazoa - 341; Fungi - 2; Plants - 148; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|39575 : 105.0) no description available & (reliability: 298.0) & (original description: Putative , Description = Sterile alpha motif domain-containing protein isoform 1, PFAM = PF00536)' T '35.1' 'not assigned.no ontology' 'niben101scf11139_90856-119547' '(at3g14120 : 1421.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport; LOCATED IN: nuclear pore; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear pore protein 84/107 (InterPro:IPR007252). & (gnl|cdd|67726 : 503.0) no description available & (gnl|cdd|37175 : 115.0) no description available & (reliability: 2842.0) & (original description: Putative NUP107, Description = Nuclear pore complex protein NUP107, PFAM = PF04121)' T '35.1' 'not assigned.no ontology' 'niben101scf11139_92931-99647' '(at3g14120 : 226.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport; LOCATED IN: nuclear pore; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear pore protein 84/107 (InterPro:IPR007252). & (reliability: 452.0) & (original description: Putative NUP107, Description = Nuclear pore complex protein NUP107, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf11139_96132-102624' '(at3g14120 : 236.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport; LOCATED IN: nuclear pore; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear pore protein 84/107 (InterPro:IPR007252). & (gnl|cdd|67726 : 92.4) no description available & (reliability: 472.0) & (original description: Putative NUP107, Description = Nuclear pore complex protein NUP107, PFAM = PF04121)' T '35.1' 'not assigned.no ontology' 'niben101scf11150_131405-134892' '(at5g65170 : 80.9) VQ motif-containing protein; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT1G35830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative , Description = , PFAM = PF05678)' T '35.1' 'not assigned.no ontology' 'niben101scf11178_57570-61072' '(at4g37470 : 462.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G03990.1); Has 8593 Blast hits to 8591 proteins in 1653 species: Archae - 86; Bacteria - 6869; Metazoa - 120; Fungi - 103; Plants - 302; Viruses - 19; Other Eukaryotes - 1094 (source: NCBI BLink). & (gnl|cdd|30941 : 92.5) no description available & (reliability: 924.0) & (original description: Putative KAI2, Description = Probable esterase KAI2, PFAM = PF00561)' T '35.1' 'not assigned.no ontology' 'niben101scf11215_44320-50546' '(at2g42770 : 254.0) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: peroxisomal membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT5G43140.1); Has 1184 Blast hits to 1184 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 462; Fungi - 330; Plants - 259; Viruses - 11; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|37155 : 113.0) no description available & (reliability: 508.0) & (original description: Putative At2g42770, Description = Expressed protein, PFAM = PF04117)' T '35.1' 'not assigned.no ontology' 'niben101scf11235_501474-517898' '(at1g06890 : 130.0) nodulin MtN21 /EamA-like transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide/sugar transporter family protein (TAIR:AT2G30460.2). & (gnl|cdd|36654 : 83.5) no description available & (reliability: 260.0) & (original description: Putative UXT1, Description = Nucleotide/sugar transporter family protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf11245_253961-263054' '(at5g51400 : 317.0) PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT2G45010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86720 : 100.0) no description available & (reliability: 630.0) & (original description: Putative CNR6, Description = Cell number regulator 6, PFAM = PF04749)' T '35.1' 'not assigned.no ontology' 'niben101scf11306_34452-40434' '(at5g01580 : 216.0) thiol reductase in OAS metabolism; OAS HIGH ACCUMULATION 1 (OSH1); FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Gamma interferon inducible lysosomal thiol reductase GILT (InterPro:IPR004911); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G07080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38370 : 185.0) no description available & (gnl|cdd|86280 : 96.9) no description available & (reliability: 432.0) & (original description: Putative Os01g0828200, Description = Os01g0828200 protein, PFAM = PF03227)' T '35.1' 'not assigned.no ontology' 'niben101scf11355_126995-135235' '(at5g16020 : 480.0) Encodes GEX3, a plasma membrane localized protein expressed in the male gametophyte. Required for micropylar pollen tube guidance. Also plays a role during early embryogenesis.; gamete-expressed 3 (GEX3); CONTAINS InterPro DOMAIN/s: Quinonprotein alcohol dehydrogenase-like (InterPro:IPR011047); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 960.0) & (original description: Putative GEX3, Description = Protein GAMETE EXPRESSED 3, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf11355_161245-173365' '(at1g67230 : 494.0) Encodes a nuclear coiled-coil protein related to the carrot peripheral nuclear protein NMCP1 that is involved in the determination of plant nuclear structure.; LITTLE NUCLEI1 (LINC1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: nucleus organization; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nuclear matrix constituent protein-related (TAIR:AT1G13220.2); Has 314297 Blast hits to 138342 proteins in 3965 species: Archae - 3454; Bacteria - 70538; Metazoa - 123746; Fungi - 25476; Plants - 17143; Viruses - 1173; Other Eukaryotes - 72767 (source: NCBI BLink). & (gnl|cdd|35383 : 108.0) no description available & (gnl|cdd|74496 : 81.9) no description available & (reliability: 988.0) & (original description: Putative NMCP1, Description = Nuclear matrix constituent protein 1, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf11379_110660-116794' '(at2g35605 : 105.0) SWIB/MDM2 domain superfamily protein; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121), SWIB domain (InterPro:IPR019835); BEST Arabidopsis thaliana protein match is: SWIB/MDM2 domain superfamily protein (TAIR:AT1G31760.1); Has 1125 Blast hits to 1022 proteins in 233 species: Archae - 0; Bacteria - 211; Metazoa - 71; Fungi - 192; Plants - 413; Viruses - 10; Other Eukaryotes - 228 (source: NCBI BLink). & (gnl|cdd|37157 : 93.6) no description available & (gnl|cdd|85905 : 91.8) no description available & (reliability: 210.0) & (original description: Putative , Description = , PFAM = PF02201)' T '35.1' 'not assigned.no ontology' 'niben101scf11380_45153-50498' '(at4g02485 : 239.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G31600.2); Has 487 Blast hits to 486 proteins in 165 species: Archae - 0; Bacteria - 93; Metazoa - 167; Fungi - 38; Plants - 88; Viruses - 3; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 478.0) & (original description: Putative BnaA09g00830D, Description = BnaA09g00830D protein, PFAM = PF13532)' T '35.1' 'not assigned.no ontology' 'niben101scf11399_18299-27905' '(at5g60590 : 322.0) DHBP synthase RibB-like alpha/beta domain; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sua5/YciO/YrdC/YwlC (InterPro:IPR004388), DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945), Sua5/YciO/YrdC, N-terminal (InterPro:IPR006070); BEST Arabidopsis thaliana protein match is: DHBP synthase RibB-like alpha/beta domain (TAIR:AT3G01920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|30359 : 154.0) no description available & (gnl|cdd|38261 : 108.0) no description available & (reliability: 644.0) & (original description: Putative YRDC, Description = YrdC domain-containing protein,mitochondrial, PFAM = PF01300)' T '35.1' 'not assigned.no ontology' 'niben101scf11401_180764-189091' '(at1g18610 : 499.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G74150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35600 : 252.0) no description available & (q39610|dyha_chlre : 105.0) Dynein alpha chain, flagellar outer arm (DHC alpha) - Chlamydomonas reinhardtii & (reliability: 998.0) & (original description: Putative glysoja_032381, Description = Rab9 effector protein with kelch motifs, PFAM = PF13418;PF13418;PF13418;PF07646;PF07646)' T '35.1' 'not assigned.no ontology' 'niben101scf11424_313978-328697' '(at3g49190 : 181.0) O-acyltransferase (WSD1-like) family protein; CONTAINS InterPro DOMAIN/s: O-acyltransferase, WSD1, C-terminal (InterPro:IPR009721), O-acyltransferase, WSD1, N-terminal (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT3G49210.1); Has 1419 Blast hits to 1410 proteins in 214 species: Archae - 2; Bacteria - 1155; Metazoa - 6; Fungi - 2; Plants - 225; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative glysoja_042312, Description = O-acyltransferase WSD1, PFAM = PF03007;PF06974)' T '35.1' 'not assigned.no ontology' 'niben101scf11444_11823-17263' '(at1g79790 : 302.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38295 : 123.0) no description available & (reliability: 604.0) & (original description: Putative At1g79790, Description = At1g79790, PFAM = PF13419)' T '35.1' 'not assigned.no ontology' 'niben101scf11447_497384-512306' '(at5g12040 : 522.0) Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein; FUNCTIONS IN: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, zinc ion binding; INVOLVED IN: nitrogen compound metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010); BEST Arabidopsis thaliana protein match is: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein (TAIR:AT4G08790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36024 : 317.0) no description available & (gnl|cdd|30737 : 213.0) no description available & (q93xi4|agub_orysa : 87.0) N-carbamoylputrescine amidase (EC 3.5.1.53) - Oryza sativa (Rice) & (reliability: 1044.0) & (original description: Putative v1g139747, Description = Predicted protein, PFAM = PF00795)' T '35.1' 'not assigned.no ontology' 'niben101scf11552_505246-511921' '(at1g28410 : 162.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT4G31340.2); Has 425 Blast hits to 402 proteins in 77 species: Archae - 4; Bacteria - 22; Metazoa - 249; Fungi - 4; Plants - 98; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative , Description = Putative coiled-coil domain-containing protein 18-like, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf11557_265132-272901' '(at5g52970 : 286.0) thylakoid lumen 15.0 kDa protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 572.0) & (original description: Putative At5g52970, Description = Thylakoid lumenal 15.0 kDa protein 2, chloroplastic, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf11589_104719-114981' '(at1g54380 : 233.0) spliceosome protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Survival motor neuron interacting protein 1 (InterPro:IPR007022); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42510.2); Has 222 Blast hits to 205 proteins in 80 species: Archae - 0; Bacteria - 6; Metazoa - 98; Fungi - 6; Plants - 54; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|68509 : 163.0) no description available & (reliability: 466.0) & (original description: Putative Sb04g027150, Description = Putative uncharacterized protein Sb04g027150, PFAM = PF04938)' T '35.1' 'not assigned.no ontology' 'niben101scf11646_395646-430980' '(at3g23980 : 307.0) Encodes a protein that interacts with the Polycomb-group (Pc-G) histone methyltransferase CLF (CURLY LEAF). It colocalizes with CLF to the nucleus and represses a subset of Pc-G target genes. The pleiotropic developmental mutant phenotype suggests that BLI prevents premature differentiation.; BLISTER (BLI); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: flower development, seed development, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 32015 Blast hits to 19612 proteins in 1632 species: Archae - 290; Bacteria - 4748; Metazoa - 14972; Fungi - 3061; Plants - 1469; Viruses - 92; Other Eukaryotes - 7383 (source: NCBI BLink). & (reliability: 614.0) & (original description: Putative BnaC03g43540D, Description = BnaC03g43540D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf11649_2771-16606' '(at1g17210 : 803.0) IAP-like protein 1 (ILP1); FUNCTIONS IN: zinc ion binding; LOCATED IN: cytosol, nucleus, phragmoplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC-like (InterPro:IPR012935), Proteinase inhibitor I32, inhibitor of apoptosis (InterPro:IPR001370); BEST Arabidopsis thaliana protein match is: C3HC zinc finger-like (TAIR:AT1G48950.1); Has 488 Blast hits to 287 proteins in 104 species: Archae - 2; Bacteria - 11; Metazoa - 108; Fungi - 61; Plants - 97; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink). & (gnl|cdd|39962 : 203.0) no description available & (gnl|cdd|71404 : 155.0) no description available & (reliability: 1606.0) & (original description: Putative BnaA06g11530D, Description = BnaA06g11530D protein, PFAM = PF07967)' T '35.1' 'not assigned.no ontology' 'niben101scf11649_48091-50750' '(at1g17200 : 128.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: protein binding; INVOLVED IN: response to karrikin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT3G14380.1). & (reliability: 256.0) & (original description: Putative f15, Description = CASP-like protein, PFAM = PF04535)' T '35.1' 'not assigned.no ontology' 'niben101scf11653_58565-85023' '(at2g46560 : 1894.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat (InterPro:IPR001680), RAVE protein 1 C-terminal (InterPro:IPR022033), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 2273 Blast hits to 1588 proteins in 291 species: Archae - 0; Bacteria - 657; Metazoa - 469; Fungi - 690; Plants - 137; Viruses - 0; Other Eukaryotes - 320 (source: NCBI BLink). & (gnl|cdd|36282 : 632.0) no description available & (reliability: 3788.0) & (original description: Putative Os01g0551900, Description = Os01g0551900 protein, PFAM = PF12234;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf11670_218599-221763' '(at4g01410 : 164.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: NDR1/HIN1-like 1 (TAIR:AT3G11660.1); Has 938 Blast hits to 938 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 938; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 118.0) no description available & (reliability: 328.0) & (original description: Putative At4g01410, Description = At4g01410, PFAM = PF03168)' T '35.1' 'not assigned.no ontology' 'niben101scf11684_173026-181751' '(at2g26770 : 664.0) plectin-related; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40820.1); Has 4722 Blast hits to 4137 proteins in 536 species: Archae - 91; Bacteria - 673; Metazoa - 2162; Fungi - 328; Plants - 350; Viruses - 13; Other Eukaryotes - 1105 (source: NCBI BLink). & (reliability: 1328.0) & (original description: Putative SCAB1, Description = Stomatal closure-related actin-binding protein 1, PFAM = PF16709;PF16712;PF16711)' T '35.1' 'not assigned.no ontology' 'niben101scf11702_5658-23240' '(at4g20325 : 323.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit B (InterPro:IPR019024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|88013 : 139.0) no description available & (gnl|cdd|39903 : 94.3) no description available & (reliability: 646.0) & (original description: Putative At4g20325, Description = Ribonuclease H2 subunit B domain-containing protein, PFAM = PF09468)' T '35.1' 'not assigned.no ontology' 'niben101scf11709_132984-135526' '(at1g62422 : 116.0) unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12020.1); Has 87 Blast hits to 86 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative)' T '35.1' 'not assigned.no ontology' 'niben101scf11737_156565-158942' '(at1g76560 : 113.0) CP12 domain-containing protein 3 (CP12-3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: negative regulation of reductive pentose-phosphate cycle; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function CP12 (InterPro:IPR003823); BEST Arabidopsis thaliana protein match is: CP12 domain-containing protein 1 (TAIR:AT2G47400.1); Has 242 Blast hits to 242 proteins in 66 species: Archae - 0; Bacteria - 121; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative cp12, Description = CP12 domain-containing protein 3, PFAM = PF02672)' T '35.1' 'not assigned.no ontology' 'niben101scf11756_382876-388905' '(at5g60210 : 260.0) ROP interactive partner 5 (RIP5); BEST Arabidopsis thaliana protein match is: ROP interactive partner 3 (TAIR:AT2G37080.1). & (reliability: 520.0) & (original description: Putative p70, Description = P70 protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf11899_23476-30811' '(at1g51580 : 198.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 6723 Blast hits to 3876 proteins in 329 species: Archae - 3; Bacteria - 266; Metazoa - 4280; Fungi - 575; Plants - 1237; Viruses - 20; Other Eukaryotes - 342 (source: NCBI BLink). & (gnl|cdd|37401 : 197.0) no description available & (reliability: 396.0) & (original description: Putative glysoja_017675, Description = KH domain-containing protein, PFAM = PF00013;PF00013;PF00013;PF00013;PF00013)' T '35.1' 'not assigned.no ontology' 'niben101scf11922_76568-79344' '(at5g19900 : 143.0) PRLI-interacting factor, putative; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative PGSC0003DMG400028980, Description = PRLI-interacting factor A, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf11960_319280-336837' '(at4g19380 : 785.0) Long-chain fatty alcohol dehydrogenase family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867), Long-chain fatty alcohol dehydrogenase (InterPro:IPR012400); BEST Arabidopsis thaliana protein match is: Long-chain fatty alcohol dehydrogenase family protein (TAIR:AT4G28570.1); Has 4189 Blast hits to 4124 proteins in 819 species: Archae - 35; Bacteria - 2697; Metazoa - 100; Fungi - 264; Plants - 164; Viruses - 0; Other Eukaryotes - 929 (source: NCBI BLink). & (gnl|cdd|84990 : 234.0) no description available & (reliability: 1570.0) & (original description: Putative FAO4A, Description = Long-chain-alcohol oxidase FAO4A, PFAM = PF00732;PF05199)' T '35.1' 'not assigned.no ontology' 'niben101scf12011_166256-178904' '(at5g23430 : 780.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G08390.1); Has 113227 Blast hits to 41164 proteins in 1010 species: Archae - 84; Bacteria - 11989; Metazoa - 46351; Fungi - 25015; Plants - 14725; Viruses - 6; Other Eukaryotes - 15057 (source: NCBI BLink). & (gnl|cdd|35488 : 565.0) no description available & (gnl|cdd|29257 : 205.0) no description available & (p93107|pf20_chlre : 100.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1560.0) & (original description: Putative kat80, Description = Katanin p80 WD40 repeat-containing subunit B1 homolog, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF13925)' T '35.1' 'not assigned.no ontology' 'niben101scf12033_24224-32781' '(at1g43130 : 397.0) like COV 2 (LCV2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF502 (InterPro:IPR007462); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF502) (TAIR:AT2G20120.1); Has 2432 Blast hits to 2432 proteins in 576 species: Archae - 20; Bacteria - 1089; Metazoa - 1; Fungi - 0; Plants - 154; Viruses - 0; Other Eukaryotes - 1168 (source: NCBI BLink). & (gnl|cdd|86633 : 178.0) no description available & (reliability: 794.0) & (original description: Putative LCV2, Description = Protein LIKE COV 2, PFAM = PF04367)' T '35.1' 'not assigned.no ontology' 'niben101scf12089_55535-67238' '(at4g11790 : 195.0) Pleckstrin homology (PH) domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein 1 (InterPro:IPR000156), Pleckstrin homology-type (InterPro:IPR011993); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37935 : 115.0) no description available & (gnl|cdd|29845 : 81.5) no description available & (reliability: 390.0) & (original description: Putative Os03g0667700, Description = Os03g0667700 protein, PFAM = PF00638)' T '35.1' 'not assigned.no ontology' 'niben101scf12127_24334-26894' '(at5g13070 : 303.0) MSF1-like family protein; CONTAINS InterPro DOMAIN/s: PRELI/MSF1 (InterPro:IPR006797); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38546 : 202.0) no description available & (gnl|cdd|68285 : 159.0) no description available & (reliability: 606.0) & (original description: Putative Sb04g029800, Description = Putative uncharacterized protein Sb04g029800, PFAM = PF04707)' T '35.1' 'not assigned.no ontology' 'niben101scf12127_24404-26891' '(at5g13070 : 192.0) MSF1-like family protein; CONTAINS InterPro DOMAIN/s: PRELI/MSF1 (InterPro:IPR006797); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38546 : 130.0) no description available & (gnl|cdd|68285 : 93.8) no description available & (reliability: 384.0) & (original description: Putative At5g13070, Description = At5g13070, PFAM = PF04707)' T '35.1' 'not assigned.no ontology' 'niben101scf12148_421456-425917' '(at1g02260 : 587.0) Divalent ion symporter; FUNCTIONS IN: citrate transmembrane transporter activity, transporter activity; INVOLVED IN: citrate transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Divalent ion symporter (InterPro:IPR004680); Has 9789 Blast hits to 6672 proteins in 1812 species: Archae - 302; Bacteria - 8135; Metazoa - 259; Fungi - 87; Plants - 203; Viruses - 2; Other Eukaryotes - 801 (source: NCBI BLink). & (gnl|cdd|37850 : 417.0) no description available & (gnl|cdd|29731 : 194.0) no description available & (reliability: 1174.0) & (original description: Putative lsi2, Description = Low silicon transporter 2, PFAM = PF03600)' T '35.1' 'not assigned.no ontology' 'niben101scf12159_641060-646040' '(at1g03070 : 359.0) Bax inhibitor-1 family protein; FUNCTIONS IN: glutamate binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Inhibitor of apoptosis-promoting Bax1 related (InterPro:IPR006214); BEST Arabidopsis thaliana protein match is: Bax inhibitor-1 family protein (TAIR:AT4G02690.1). & (gnl|cdd|37533 : 206.0) no description available & (reliability: 718.0) & (original description: Putative BnaC02g27190D, Description = BnaC02g27190D protein, PFAM = PF01027)' T '35.1' 'not assigned.no ontology' 'niben101scf12197_440814-443137' '(at5g42570 : 122.0) B-cell receptor-associated 31-like; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: B-cell receptor-associated protein 31-like (TAIR:AT1G11905.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative MTR_5g093360, Description = B-cell receptor-associated-like protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf12266_182902-193999' '(at3g06820 : 439.0) Mov34/MPN/PAD-1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: Mov34/MPN/PAD-1 family protein (TAIR:AT1G80210.1); Has 1006 Blast hits to 928 proteins in 230 species: Archae - 0; Bacteria - 7; Metazoa - 464; Fungi - 225; Plants - 185; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (gnl|cdd|36768 : 133.0) no description available & (reliability: 878.0) & (original description: Putative brcc3, Description = Lys-63-specific deubiquitinase BRCC36, PFAM = PF01398)' T '35.1' 'not assigned.no ontology' 'niben101scf12320_291441-298144' '(at5g12410 : 360.0) THUMP domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: THUMP (InterPro:IPR004114); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39146 : 99.0) no description available & (reliability: 720.0) & (original description: Putative pco065439, Description = THUMP domain containing protein, PFAM = PF02926)' T '35.1' 'not assigned.no ontology' 'niben101scf12320_291477-297767' '(at5g12410 : 287.0) THUMP domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: THUMP (InterPro:IPR004114); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39146 : 97.1) no description available & (reliability: 574.0) & (original description: Putative pco065439, Description = THUMP domain containing protein, PFAM = PF02926)' T '35.1' 'not assigned.no ontology' 'niben101scf12321_100272-106864' '(at3g10260 : 326.0) Reticulon family protein; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT3G61560.1); Has 1060 Blast hits to 1060 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 591; Fungi - 0; Plants - 458; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37003 : 207.0) no description available & (gnl|cdd|66169 : 201.0) no description available & (reliability: 652.0) & (original description: Putative RTNLB8, Description = Reticulon-like protein B8, PFAM = PF02453)' T '35.1' 'not assigned.no ontology' 'niben101scf12428_17270-22665' '(at4g18930 : 209.0) RNA ligase/cyclic nucleotide phosphodiesterase family protein; CONTAINS InterPro DOMAIN/s: RNA ligase/cyclic nucleotide phosphodiesterase (InterPro:IPR009097), 2',3'-cyclic-nucleotide 3'-phosphodiesterase (InterPro:IPR012386); BEST Arabidopsis thaliana protein match is: RNA ligase/cyclic nucleotide phosphodiesterase family protein (TAIR:AT4G18940.1); Has 112 Blast hits to 112 proteins in 29 species: Archae - 3; Bacteria - 12; Metazoa - 0; Fungi - 8; Plants - 58; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|87380 : 129.0) no description available & (reliability: 418.0) & (original description: Putative At4g18930, Description = Cyclic phosphodiesterase, PFAM = PF07823)' T '35.1' 'not assigned.no ontology' 'niben101scf12718_159416-167866' '(at5g23890 : 552.0) LOCATED IN: mitochondrion, chloroplast thylakoid membrane, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: S-layer homology domain (InterPro:IPR001119); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52410.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1104.0) & (original description: Putative BnaA06g26460D, Description = BnaA06g26460D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf12757_138745-163672' '(at1g19100 : 650.0) Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (TAIR:AT4G36280.1); Has 533 Blast hits to 518 proteins in 94 species: Archae - 0; Bacteria - 53; Metazoa - 227; Fungi - 0; Plants - 195; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|37056 : 295.0) no description available & (reliability: 1300.0) & (original description: Putative MORC6, Description = Protein MICRORCHIDIA 6, PFAM = PF13589)' T '35.1' 'not assigned.no ontology' 'niben101scf12762_50647-53002' '(q65wt0|bd31b_orysa : 261.0) Protein BUD31 homolog 2 (Protein G10 homolog 2) - Oryza sativa (Rice) & (at4g21110 : 253.0) G10 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: G10 protein (InterPro:IPR001748), BUD31/G10-related, conserved site (InterPro:IPR018230); Has 466 Blast hits to 466 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 189; Fungi - 126; Plants - 80; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|64960 : 231.0) no description available & (gnl|cdd|38614 : 229.0) no description available & (reliability: 506.0) & (original description: Putative g10, Description = Cell cycle control protein cwf14, PFAM = PF01125)' T '35.1' 'not assigned.no ontology' 'niben101scf12841_88619-93568' '(at3g14860 : 501.0) NHL domain-containing protein; CONTAINS InterPro DOMAIN/s: NHL repeat (InterPro:IPR001258), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT1G70280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1002.0) & (original description: Putative BnaC03g38770D, Description = BnaC03g38770D protein, PFAM = PF01436)' T '35.1' 'not assigned.no ontology' 'niben101scf12847_163300-171686' '(at1g56290 : 625.0) CwfJ-like family protein; CONTAINS InterPro DOMAIN/s: Cwf19-like, C-terminal domain-1 (InterPro:IPR006768), Cwf19-like protein, C-terminal domain-2 (InterPro:IPR006767); BEST Arabidopsis thaliana protein match is: CwfJ-like family protein / zinc finger (CCCH-type) family protein (TAIR:AT5G56900.2); Has 2474 Blast hits to 2009 proteins in 284 species: Archae - 2; Bacteria - 39; Metazoa - 1047; Fungi - 300; Plants - 173; Viruses - 2; Other Eukaryotes - 911 (source: NCBI BLink). & (gnl|cdd|37688 : 383.0) no description available & (gnl|cdd|86708 : 157.0) no description available & (reliability: 1250.0) & (original description: Putative At1g56290, Description = CwfJ-like protein, PFAM = PF04677;PF04676)' T '35.1' 'not assigned.no ontology' 'niben101scf12848_35727-42050' '(at5g57170 : 192.0) Tautomerase/MIF superfamily protein; INVOLVED IN: inflammatory response, response to other organism; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tautomerase (InterPro:IPR014347), Macrophage migration inhibitory factor (InterPro:IPR001398); BEST Arabidopsis thaliana protein match is: Tautomerase/MIF superfamily protein (TAIR:AT5G01650.2). & (gnl|cdd|36970 : 137.0) no description available & (gnl|cdd|85294 : 83.4) no description available & (reliability: 384.0) & (original description: Putative At5g01650, Description = Macrophage migration inhibitory factor like, PFAM = PF01187)' T '35.1' 'not assigned.no ontology' 'niben101scf12866_8252-11451' '(at4g18760 : 292.0) receptor like protein 51 (RLP51); INVOLVED IN: signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 55 (TAIR:AT5G45770.1); Has 79225 Blast hits to 27308 proteins in 1069 species: Archae - 23; Bacteria - 3934; Metazoa - 14197; Fungi - 996; Plants - 54596; Viruses - 12; Other Eukaryotes - 5467 (source: NCBI BLink). & (reliability: 584.0) & (original description: Putative RLP51, Description = Receptor-like protein 51, PFAM = PF00560;PF13855)' T '35.1' 'not assigned.no ontology' 'niben101scf13000_458026-463654' '(at5g56750 : 572.0) N-MYC downregulated-like 1 (NDL1); CONTAINS InterPro DOMAIN/s: Pollen specific protein SF21 (InterPro:IPR015511), Ndr (InterPro:IPR004142); BEST Arabidopsis thaliana protein match is: N-MYC downregulated-like 3 (TAIR:AT2G19620.1); Has 776 Blast hits to 775 proteins in 111 species: Archae - 2; Bacteria - 48; Metazoa - 563; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (o23969|sf21_helan : 494.0) Pollen-specific protein SF21 - Helianthus annuus (Common sunflower) & (gnl|cdd|38142 : 401.0) no description available & (gnl|cdd|66750 : 369.0) no description available & (reliability: 1144.0) & (original description: Putative NDL1, Description = AT5g56750/MIK19_22, PFAM = PF03096)' T '35.1' 'not assigned.no ontology' 'niben101scf13057_1270-6310' '(at3g27090 : 370.0) DCD (Development and Cell Death) domain protein; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G42050.1); Has 746 Blast hits to 671 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 441 (source: NCBI BLink). & (p37707|b2_dauca : 268.0) B2 protein - Daucus carota (Carrot) & (reliability: 740.0) & (original description: Putative , Description = DCD (Development and cell death) domain protein, PFAM = PF10539)' T '35.1' 'not assigned.no ontology' 'niben101scf13206_266357-270386' '(at3g61200 : 143.0) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT1G04290.1); Has 296 Blast hits to 296 proteins in 69 species: Archae - 1; Bacteria - 37; Metazoa - 61; Fungi - 14; Plants - 161; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|38538 : 83.4) no description available & (reliability: 286.0) & (original description: Putative Sb02g011120, Description = Putative uncharacterized protein Sb02g011120, PFAM = PF03061)' T '35.1' 'not assigned.no ontology' 'niben101scf13391_59139-62926' '(at4g24970 : 662.0) Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; FUNCTIONS IN: ATP binding; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (TAIR:AT5G50780.1); Has 769 Blast hits to 718 proteins in 131 species: Archae - 4; Bacteria - 82; Metazoa - 313; Fungi - 18; Plants - 223; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (gnl|cdd|37056 : 412.0) no description available & (reliability: 1308.0) & (original description: Putative MORC4, Description = Protein MICRORCHIDIA 4, PFAM = PF13589)' T '35.1' 'not assigned.no ontology' 'niben101scf13399_48696-52069' '(at5g45790 : 438.0) Ubiquitin carboxyl-terminal hydrolase family protein; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant (InterPro:IPR021099); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein (TAIR:AT4G33495.1). & (reliability: 876.0) & (original description: Putative At5g45790, Description = Ubiquitin carboxyl-terminal hydrolase family protein, PFAM = PF11955)' T '35.1' 'not assigned.no ontology' 'niben101scf13683_28277-34345' '(at1g04945 : 346.0) HIT-type Zinc finger family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein ycf60 (InterPro:IPR019109), Zinc finger, HIT-type (InterPro:IPR007529); BEST Arabidopsis thaliana protein match is: translocon at the inner envelope membrane of chloroplasts 20 (TAIR:AT1G04940.1). & (reliability: 692.0) & (original description: Putative At1g04945, Description = HIT-type zinc finger family protein, PFAM = PF04438)' T '35.1' 'not assigned.no ontology' 'niben101scf13683_28349-34360' '(at1g04945 : 344.0) HIT-type Zinc finger family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein ycf60 (InterPro:IPR019109), Zinc finger, HIT-type (InterPro:IPR007529); BEST Arabidopsis thaliana protein match is: translocon at the inner envelope membrane of chloroplasts 20 (TAIR:AT1G04940.1). & (reliability: 688.0) & (original description: Putative At1g04945, Description = HIT-type zinc finger family protein, PFAM = PF04438)' T '35.1' 'not assigned.no ontology' 'niben101scf13821_74341-80702' '(gnl|cdd|47984 : 109.0) no description available & (at4g35890 : 88.6) winged-helix DNA-binding transcription factor family protein; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT5G66100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative larp1, Description = Lupus la ribonucleoprotein, putative, PFAM = PF05383)' T '35.1' 'not assigned.no ontology' 'niben101scf13828_127569-174783' '(at5g17370 : 321.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37906 : 187.0) no description available & (reliability: 642.0) & (original description: Putative BnaC02g07280D, Description = BnaC02g07280D protein, PFAM = PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf14003_111487-120992' '(at1g52510 : 535.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G12830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36667 : 107.0) no description available & (gnl|cdd|81168 : 89.2) no description available & (reliability: 1070.0) & (original description: Putative xd6, Description = Alpha/beta hydrolase, PFAM = PF12146)' T '35.1' 'not assigned.no ontology' 'niben101scf14003_113736-119658' '(at1g52510 : 241.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G12830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative xd6, Description = Alpha/beta fold hydrolase, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf14022_230023-246614' '(at5g35560 : 840.0) DENN (AEX-3) domain-containing protein; CONTAINS InterPro DOMAIN/s: uDENN (InterPro:IPR005113), dDENN (InterPro:IPR005112), DENN (InterPro:IPR001194); BEST Arabidopsis thaliana protein match is: DENN (AEX-3) domain-containing protein (TAIR:AT2G20320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1680.0) & (original description: Putative Os02g0777100, Description = DENN domain containing protein, expressed, PFAM = PF02141;PF03456)' T '35.1' 'not assigned.no ontology' 'niben101scf14041_189173-202244' '(gnl|cdd|30370 : 193.0) no description available & (at5g58770 : 152.0) Undecaprenyl pyrophosphate synthetase family protein; FUNCTIONS IN: dehydrodolichyl diphosphate synthase activity; INVOLVED IN: dolichol biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Di-trans-poly-cis-decaprenylcistransferase-like, conserved site (InterPro:IPR018520), Di-trans-poly-cis-decaprenylcistransferase-like (InterPro:IPR001441); BEST Arabidopsis thaliana protein match is: Undecaprenyl pyrophosphate synthetase family protein (TAIR:AT5G58782.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36815 : 147.0) no description available & (reliability: 304.0) & (original description: Putative ispU, Description = Isoprenyl transferase, PFAM = PF01255;PF01255)' T '35.1' 'not assigned.no ontology' 'niben101scf14069_191533-202347' '(at2g30880 : 515.0) Pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: plant-type cell wall; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Pleckstrin homology (InterPro:IPR001849); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1030.0) & (original description: Putative At2g30880, Description = At2g30880/F7F1.9, PFAM = PF00169)' T '35.1' 'not assigned.no ontology' 'niben101scf14164_30216-33508' '(at3g26040 : 224.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 2415 Blast hits to 2403 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 2353; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|66174 : 219.0) no description available & (o23918|hcbt3_diaca : 91.3) Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 448.0) & (original description: Putative acyl3a, Description = Acyltransferase-like protein, PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'niben101scf14179_106380-113504' '(at1g10950 : 817.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis.; transmembrane nine 1 (TMN1); LOCATED IN: integral to membrane, Golgi apparatus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G37310.1); Has 1611 Blast hits to 1538 proteins in 326 species: Archae - 0; Bacteria - 16; Metazoa - 610; Fungi - 273; Plants - 454; Viruses - 0; Other Eukaryotes - 258 (source: NCBI BLink). & (gnl|cdd|36491 : 768.0) no description available & (gnl|cdd|66650 : 539.0) no description available & (reliability: 1634.0) & (original description: Putative TMN1, Description = Transmembrane 9 superfamily member 1, PFAM = PF02990)' T '35.1' 'not assigned.no ontology' 'niben101scf14323_86084-92161' '(at4g23840 : 429.0) Leucine-rich repeat (LRR) family protein; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat family protein (TAIR:AT1G15740.1); Has 13188 Blast hits to 8222 proteins in 561 species: Archae - 2; Bacteria - 5781; Metazoa - 2271; Fungi - 110; Plants - 3199; Viruses - 40; Other Eukaryotes - 1785 (source: NCBI BLink). & (reliability: 858.0) & (original description: Putative Sb09g006650, Description = Putative uncharacterized protein Sb09g006650, PFAM = PF13516;PF13516;PF13516)' T '35.1' 'not assigned.no ontology' 'niben101scf14325_38474-47089' '(at5g10780 : 246.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP017207, transmembrane protein 85 (InterPro:IPR016687), Protein of unknown function DUF1077 (InterPro:IPR009445); Has 395 Blast hits to 395 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 122; Plants - 51; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (gnl|cdd|38528 : 197.0) no description available & (gnl|cdd|87075 : 172.0) no description available & (reliability: 492.0) & (original description: Putative Sb10g013601, Description = Putative uncharacterized protein Sb10g013601, PFAM = PF06417)' T '35.1' 'not assigned.no ontology' 'niben101scf14344_162171-171972' '(gnl|cdd|37940 : 122.0) no description available & (at3g12180 : 107.0) Cornichon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular signaling pathway; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cornichon (InterPro:IPR003377); BEST Arabidopsis thaliana protein match is: Cornichon family protein (TAIR:AT1G12390.1); Has 605 Blast hits to 605 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 316; Fungi - 159; Plants - 93; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|66954 : 88.7) no description available & (reliability: 214.0) & (original description: Putative At3g12180, Description = Protein cornichon homolog 1, PFAM = PF03311)' T '35.1' 'not assigned.no ontology' 'niben101scf14397_29656-34077' '(at1g67170 : 136.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 5478 Blast hits to 4354 proteins in 533 species: Archae - 87; Bacteria - 653; Metazoa - 2554; Fungi - 380; Plants - 418; Viruses - 16; Other Eukaryotes - 1370 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative BnaC03g52190D, Description = BnaC03g52190D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf14477_197934-206460' '(at1g30890 : 422.0) Integral membrane HRF1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Hrf1 (InterPro:IPR005578); BEST Arabidopsis thaliana protein match is: Integral membrane HRF1 family protein (TAIR:AT3G59500.1); Has 474 Blast hits to 474 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 204; Fungi - 142; Plants - 75; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|38304 : 277.0) no description available & (gnl|cdd|67490 : 241.0) no description available & (reliability: 844.0) & (original description: Putative HRF1, Description = HRF1 protein, PFAM = PF03878)' T '35.1' 'not assigned.no ontology' 'niben101scf14636_84648-100187' '(at2g01070 : 613.0) Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G72480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37779 : 474.0) no description available & (gnl|cdd|87161 : 325.0) no description available & (reliability: 1226.0) & (original description: Putative At2g01070, Description = Lung seven transmembrane receptor-like protein, PFAM = PF06814)' T '35.1' 'not assigned.no ontology' 'niben101scf14650_17857-22812' '(at1g32080 : 600.0) membrane protein, putative; LOCATED IN: chloroplast, chloroplast inner membrane, membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LrgB-like protein (InterPro:IPR007300); Has 3603 Blast hits to 3592 proteins in 1271 species: Archae - 22; Bacteria - 3356; Metazoa - 0; Fungi - 58; Plants - 57; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). & (gnl|cdd|86566 : 110.0) no description available & (reliability: 1200.0) & (original description: Putative PLGG1, Description = Plastidal glycolate/glycerate translocator 1, chloroplastic, PFAM = PF04172)' T '35.1' 'not assigned.no ontology' 'niben101scf14697_130957-133610' '(at3g56880 : 102.0) VQ motif-containing protein; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: calmodulin (CAM)-binding protein of 25 kDa (TAIR:AT2G41010.1); Has 109 Blast hits to 109 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 106; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative , Description = , PFAM = PF05678)' T '35.1' 'not assigned.no ontology' 'niben101scf14771_5773-10967' '(at1g16860 : 606.0) Ubiquitin-specific protease family C19-related protein; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: Ubiquitin-specific protease family C19-related protein (TAIR:AT1G78880.1); Has 605 Blast hits to 295 proteins in 85 species: Archae - 0; Bacteria - 22; Metazoa - 26; Fungi - 28; Plants - 169; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 1212.0) & (original description: Putative At1g16860, Description = Uncharacterized membrane protein At1g16860, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf14939_117683-120131' '(at3g27090 : 154.0) DCD (Development and Cell Death) domain protein; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G42050.1); Has 746 Blast hits to 671 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 441 (source: NCBI BLink). & (p37707|b2_dauca : 131.0) B2 protein - Daucus carota (Carrot) & (reliability: 308.0) & (original description: Putative , Description = Predicted protein, PFAM = PF10539)' T '35.1' 'not assigned.no ontology' 'niben101scf14989_94156-102978' '(at5g10810 : 164.0) enhancer of rudimentary homolog ATER; ENHANCER OF RUDIMENTARY HOMOLOGUE (ER); CONTAINS InterPro DOMAIN/s: Enhancer of rudimentary (InterPro:IPR000781); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|64968 : 147.0) no description available & (gnl|cdd|36977 : 131.0) no description available & (reliability: 328.0) & (original description: Putative erh, Description = Enhancer of rudimentary homolog, PFAM = PF01133)' T '35.1' 'not assigned.no ontology' 'niben101scf15120_45067-47836' '(at1g76340 : 556.0) Encodes a nucleotide-sugar transporter.; golgi nucleotide sugar transporter 3 (GONST3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: golgi nucleotide sugar transporter 4 (TAIR:AT5G19980.1); Has 1377 Blast hits to 1372 proteins in 233 species: Archae - 0; Bacteria - 8; Metazoa - 324; Fungi - 246; Plants - 675; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|36657 : 287.0) no description available & (reliability: 1112.0) & (original description: Putative GONST3, Description = GDP-mannose transporter GONST3, PFAM = PF03151)' T '35.1' 'not assigned.no ontology' 'niben101scf15227_10787-13113' '(at1g74340 : 102.0) dolichol phosphate-mannose biosynthesis regulatory protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: macromolecule biosynthetic process; LOCATED IN: integral to endoplasmic reticulum membrane, endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dolichol phosphate-mannose biosynthesis regulatory (InterPro:IPR009914); Has 224 Blast hits to 224 proteins in 115 species: Archae - 0; Bacteria - 0; Metazoa - 93; Fungi - 78; Plants - 25; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|38698 : 100.0) no description available & (gnl|cdd|70750 : 99.3) no description available & (reliability: 204.0) & (original description: Putative DPM2, Description = Dolichol phosphate-mannose biosynthesis regulatory protein, PFAM = PF07297)' T '35.1' 'not assigned.no ontology' 'niben101scf15260_73763-76346' '(gnl|cdd|36491 : 182.0) no description available & (at1g10950 : 153.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis.; transmembrane nine 1 (TMN1); LOCATED IN: integral to membrane, Golgi apparatus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G37310.1); Has 1611 Blast hits to 1538 proteins in 326 species: Archae - 0; Bacteria - 16; Metazoa - 610; Fungi - 273; Plants - 454; Viruses - 0; Other Eukaryotes - 258 (source: NCBI BLink). & (gnl|cdd|66650 : 105.0) no description available & (reliability: 306.0) & (original description: Putative SMBP, Description = Transmembrane 9 superfamily member, PFAM = PF02990)' T '35.1' 'not assigned.no ontology' 'niben101scf15260_75143-83451' '(at1g10950 : 643.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis.; transmembrane nine 1 (TMN1); LOCATED IN: integral to membrane, Golgi apparatus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G37310.1); Has 1611 Blast hits to 1538 proteins in 326 species: Archae - 0; Bacteria - 16; Metazoa - 610; Fungi - 273; Plants - 454; Viruses - 0; Other Eukaryotes - 258 (source: NCBI BLink). & (gnl|cdd|36491 : 556.0) no description available & (gnl|cdd|66650 : 404.0) no description available & (reliability: 1286.0) & (original description: Putative SMBP, Description = Transmembrane 9 superfamily member, PFAM = PF02990)' T '35.1' 'not assigned.no ontology' 'niben101scf15263_142106-171635' '(at5g22320 : 274.0) Leucine-rich repeat (LRR) family protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 4 (TAIR:AT4G35470.1). & (reliability: 548.0) & (original description: Putative KK1_034620, Description = Protein phosphatase 1 regulatory subunit 7, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf15286_118140-127095' '(at5g62720 : 243.0) Integral membrane HPP family protein; CONTAINS InterPro DOMAIN/s: HPP (InterPro:IPR007065); BEST Arabidopsis thaliana protein match is: Integral membrane HPP family protein (TAIR:AT3G47980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68551 : 106.0) no description available & (reliability: 486.0) & (original description: Putative BnaA06g16970D, Description = BnaA06g16970D protein, PFAM = PF04982)' T '35.1' 'not assigned.no ontology' 'niben101scf15338_37649-45962' '(at1g61670 : 686.0) Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G10980.1); Has 653 Blast hits to 651 proteins in 175 species: Archae - 0; Bacteria - 2; Metazoa - 278; Fungi - 148; Plants - 158; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|37779 : 516.0) no description available & (gnl|cdd|87161 : 347.0) no description available & (reliability: 1372.0) & (original description: Putative Sb01g036190, Description = Putative uncharacterized protein Sb01g036190, PFAM = PF06814)' T '35.1' 'not assigned.no ontology' 'niben101scf15476_189591-195057' '(at1g26520 : 434.0) Cobalamin biosynthesis CobW-like protein; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495), Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal (InterPro:IPR011629); BEST Arabidopsis thaliana protein match is: Cobalamin biosynthesis CobW-like protein (TAIR:AT1G15730.1); Has 8517 Blast hits to 8427 proteins in 1716 species: Archae - 88; Bacteria - 6047; Metazoa - 151; Fungi - 280; Plants - 232; Viruses - 0; Other Eukaryotes - 1719 (source: NCBI BLink). & (gnl|cdd|37954 : 349.0) no description available & (gnl|cdd|30869 : 234.0) no description available & (reliability: 868.0) & (original description: Putative CBWD1, Description = COBW domain-containing protein 1, PFAM = PF02492;PF07683)' T '35.1' 'not assigned.no ontology' 'niben101scf15532_111110-117594' '(at5g57700 : 467.0) BNR/Asp-box repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Neuraminidase (InterPro:IPR011040), BNR repeat (InterPro:IPR002860); Has 762 Blast hits to 754 proteins in 300 species: Archae - 6; Bacteria - 615; Metazoa - 0; Fungi - 22; Plants - 42; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|34308 : 110.0) no description available & (reliability: 934.0) & (original description: Putative nanB, Description = Sialidase, PFAM = PF13088)' T '35.1' 'not assigned.no ontology' 'niben101scf15536_221725-238421' '(at1g55090 : 1308.0) carbon-nitrogen hydrolase family protein; FUNCTIONS IN: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, NAD+ synthase (glutamine-hydrolyzing) activity, ATP binding; INVOLVED IN: nitrogen compound metabolic process, NAD biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), NAD synthase (InterPro:IPR003694), Glutamine-dependent NAD(+) synthetase, GAT domain-containing (InterPro:IPR014445), NAD/GMP synthase (InterPro:IPR022310); Has 5923 Blast hits to 5903 proteins in 2409 species: Archae - 233; Bacteria - 4478; Metazoa - 145; Fungi - 142; Plants - 70; Viruses - 0; Other Eukaryotes - 855 (source: NCBI BLink). & (gnl|cdd|37514 : 1144.0) no description available & (gnl|cdd|30166 : 242.0) no description available & (reliability: 2616.0) & (original description: Putative At1g55090, Description = Glutamine-dependent NAD(+) synthetase, PFAM = PF00795;PF02540)' T '35.1' 'not assigned.no ontology' 'niben101scf15538_117660-119976' '(at3g58180 : 370.0) ARM repeat superfamily protein; FUNCTIONS IN: lyase activity, binding; INVOLVED IN: biological_process unknown; LOCATED IN: phycobilisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), PBS lyase HEAT-like repeat (InterPro:IPR004155); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G62530.1); Has 1934 Blast hits to 1064 proteins in 388 species: Archae - 226; Bacteria - 670; Metazoa - 295; Fungi - 345; Plants - 90; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (q2qxb3|dohha_orysa : 358.0) Deoxyhypusine hydroxylase-A (EC 1.14.99.29) (Deoxyhypusine monooxygenase-A) - Oryza sativa (Rice) & (gnl|cdd|35787 : 303.0) no description available & (reliability: 740.0) & (original description: Putative doh1, Description = DOHH, PFAM = PF13646;PF13646)' T '35.1' 'not assigned.no ontology' 'niben101scf15579_89886-97757' '(at5g63010 : 428.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G32950.1); Has 4234 Blast hits to 3983 proteins in 322 species: Archae - 2; Bacteria - 280; Metazoa - 1738; Fungi - 841; Plants - 754; Viruses - 0; Other Eukaryotes - 619 (source: NCBI BLink). & (gnl|cdd|35501 : 304.0) no description available & (reliability: 856.0) & (original description: Putative At5g63010, Description = WD40 domain-containing protein, PFAM = PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf15671_146335-149882' '(at3g07790 : 544.0) DGCR14-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear protein DGCR14 (InterPro:IPR019148); Has 334 Blast hits to 326 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 141; Fungi - 84; Plants - 40; Viruses - 21; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|37838 : 322.0) no description available & (reliability: 1088.0) & (original description: Putative , Description = , PFAM = PF09751)' T '35.1' 'not assigned.no ontology' 'niben101scf15678_165564-172561' '(at3g10210 : 324.0) SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); BEST Arabidopsis thaliana protein match is: SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (TAIR:AT4G35750.1); Has 394 Blast hits to 394 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 260; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|37844 : 132.0) no description available & (reliability: 648.0) & (original description: Putative , Description = , PFAM = PF13716)' T '35.1' 'not assigned.no ontology' 'niben101scf15962_102197-108880' '(at3g61080 : 479.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fructosamine/Ketosamine-3-kinase (InterPro:IPR016477), Protein kinase-like domain (InterPro:IPR011009); Has 2101 Blast hits to 2101 proteins in 833 species: Archae - 8; Bacteria - 1432; Metazoa - 140; Fungi - 164; Plants - 42; Viruses - 0; Other Eukaryotes - 315 (source: NCBI BLink). & (gnl|cdd|38231 : 404.0) no description available & (gnl|cdd|32819 : 240.0) no description available & (reliability: 958.0) & (original description: Putative aph, Description = Fructosamine/Ketosamine-3-kinase, PFAM = PF03881)' T '35.1' 'not assigned.no ontology' 'niben101scf16234_209463-211864' '(at1g11925 : 111.0) Encodes a Stigma-specific Stig1 family protein; Stigma-specific Stig1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Stigma-specific protein Stig1 (InterPro:IPR006969); BEST Arabidopsis thaliana protein match is: Stigma-specific Stig1 family protein (TAIR:AT1G50720.1); Has 350 Blast hits to 216 proteins in 35 species: Archae - 0; Bacteria - 116; Metazoa - 3; Fungi - 54; Plants - 172; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|68459 : 98.9) no description available & (reliability: 222.0) & (original description: Putative BnaC08g41650D, Description = BnaC08g41650D protein, PFAM = PF04885)' T '35.1' 'not assigned.no ontology' 'niben101scf16244_304706-310499' '(at5g09860 : 128.0) Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.; THO1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: production of ta-siRNAs involved in RNA interference, gene silencing by RNA; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: THO complex, subunit THOC1 (InterPro:IPR021861). & (gnl|cdd|37702 : 88.2) no description available & (reliability: 256.0) & (original description: Putative EMU, Description = THO complex subunit 1, PFAM = PF11957)' T '35.1' 'not assigned.no ontology' 'niben101scf16580_38927-49791' '(at5g19820 : 872.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37382 : 627.0) no description available & (reliability: 1744.0) & (original description: Putative emb2734, Description = Importin-5, PFAM = PF13646;PF02985)' T '35.1' 'not assigned.no ontology' 'niben101scf16585_268118-273462' '(at1g78620 : 349.0) Protein of unknown function DUF92, transmembrane; LOCATED IN: chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF92, transmembrane (InterPro:IPR002794); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|32021 : 165.0) no description available & (reliability: 698.0) & (original description: Putative sll0875, Description = Uncharacterized membrane protein sll0875, PFAM = PF01940)' T '35.1' 'not assigned.no ontology' 'niben101scf16660_69182-74286' '(at1g18440 : 327.0) Peptidyl-tRNA hydrolase family protein; FUNCTIONS IN: aminoacyl-tRNA hydrolase activity; INVOLVED IN: translation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-tRNA hydrolase, conserved site (InterPro:IPR018171), Peptidyl-tRNA hydrolase (InterPro:IPR001328); BEST Arabidopsis thaliana protein match is: Peptidyl-tRNA hydrolase family protein (TAIR:AT5G16140.2); Has 8043 Blast hits to 8040 proteins in 2597 species: Archae - 0; Bacteria - 5299; Metazoa - 47; Fungi - 102; Plants - 126; Viruses - 0; Other Eukaryotes - 2469 (source: NCBI BLink). & (gnl|cdd|48347 : 324.0) no description available & (gnl|cdd|37466 : 212.0) no description available & (reliability: 654.0) & (original description: Putative pth, Description = Peptidyl-tRNA hydrolase, PFAM = PF01195)' T '35.1' 'not assigned.no ontology' 'niben101scf17137_78241-88236' '(at5g13020 : 389.0) Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), ENT (InterPro:IPR005491); BEST Arabidopsis thaliana protein match is: Emsy N Terminus (ENT) domain-containing protein (TAIR:AT2G44440.1); Has 417 Blast hits to 397 proteins in 49 species: Archae - 0; Bacteria - 2; Metazoa - 101; Fungi - 4; Plants - 307; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|39874 : 216.0) no description available & (gnl|cdd|67356 : 117.0) no description available & (reliability: 778.0) & (original description: Putative EML3, Description = Protein EMSY-LIKE 3, PFAM = PF03735)' T '35.1' 'not assigned.no ontology' 'niben101scf17137_169943-186732' '(at2g44420 : 400.0) protein N-terminal asparagine amidohydrolase family protein; Has 155 Blast hits to 154 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 800.0) & (original description: Putative At2g44420, Description = Expressed protein, PFAM = PF14736)' T '35.1' 'not assigned.no ontology' 'niben101scf17243_234833-273891' '(at5g64440 : 455.0) AtFAAH (fatty acid amide hydrolase) modulates endogenous NAEs (N-Acylethanolamines) levels in plants by hydrolyzing NAEs to ethanolamine and their corresponding free fatty acids. NAE depletion likely participates in the regulation of plant growth.; fatty acid amide hydrolase (FAAH); FUNCTIONS IN: N-(long-chain-acyl)ethanolamine deacylase activity, amidase activity; INVOLVED IN: defense response to bacterium; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT3G25660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30503 : 331.0) no description available & (gnl|cdd|36425 : 294.0) no description available & (reliability: 910.0) & (original description: Putative Sb08g004400, Description = Putative uncharacterized protein Sb08g004400, PFAM = PF01425)' T '35.1' 'not assigned.no ontology' 'niben101scf17243_237527-244923' '(at5g64440 : 84.0) AtFAAH (fatty acid amide hydrolase) modulates endogenous NAEs (N-Acylethanolamines) levels in plants by hydrolyzing NAEs to ethanolamine and their corresponding free fatty acids. NAE depletion likely participates in the regulation of plant growth.; fatty acid amide hydrolase (FAAH); FUNCTIONS IN: N-(long-chain-acyl)ethanolamine deacylase activity, amidase activity; INVOLVED IN: defense response to bacterium; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT3G25660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative LOC100273549, Description = Fatty acid amide hydrolase, PFAM = PF01425)' T '35.1' 'not assigned.no ontology' 'niben101scf17324_24395-36756' '(at4g09670 : 370.0) Oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase, N-terminal (InterPro:IPR000683), Oxidoreductase, C-terminal (InterPro:IPR004104), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: Glyceraldehyde-3-phosphate dehydrogenase-like family protein (TAIR:AT1G34200.1); Has 17148 Blast hits to 17147 proteins in 2160 species: Archae - 344; Bacteria - 12203; Metazoa - 250; Fungi - 605; Plants - 99; Viruses - 0; Other Eukaryotes - 3647 (source: NCBI BLink). & (gnl|cdd|37952 : 295.0) no description available & (gnl|cdd|31017 : 142.0) no description available & (reliability: 740.0) & (original description: Putative BnaC06g27420D, Description = BnaC06g27420D protein, PFAM = PF01408)' T '35.1' 'not assigned.no ontology' 'niben101scf17473_119720-129531' '(at1g07080 : 272.0) Thioredoxin superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma interferon inducible lysosomal thiol reductase GILT (InterPro:IPR004911), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: gamma interferon responsive lysosomal thiol (GILT) reductase family protein (TAIR:AT5G01580.1); Has 470 Blast hits to 463 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 320; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|38370 : 196.0) no description available & (gnl|cdd|86280 : 102.0) no description available & (reliability: 544.0) & (original description: Putative OSH1, Description = Gamma-interferon-inducible lysosomal thiol reductase, putative, PFAM = PF03227)' T '35.1' 'not assigned.no ontology' 'niben101scf17490_1008-10062' '(at3g07170 : 147.0) Sterile alpha motif (SAM) domain-containing protein; CONTAINS InterPro DOMAIN/s: Sterile alpha motif (InterPro:IPR001660), Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 1 (InterPro:IPR021129); BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT5G48680.1); Has 516 Blast hits to 515 proteins in 77 species: Archae - 0; Bacteria - 10; Metazoa - 341; Fungi - 2; Plants - 148; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|39575 : 103.0) no description available & (reliability: 294.0) & (original description: Putative TCM_002879, Description = Sterile alpha motif domain-containing protein isoform 1, PFAM = PF00536)' T '35.1' 'not assigned.no ontology' 'niben101scf17597_78425-93849' '(at1g04300 : 738.0) TRAF-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like superfamily protein (TAIR:AT5G43560.2). & (gnl|cdd|58100 : 101.0) no description available & (reliability: 1476.0) & (original description: Putative At5g43560, Description = MATH domain-containing protein At5g43560, PFAM = PF00917)' T '35.1' 'not assigned.no ontology' 'niben101scf17612_139790-172164' '(at4g17180 : 653.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 2802 Blast hits to 2733 proteins in 160 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 65; Plants - 2718; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|84700 : 245.0) no description available & (p52408|e13b_prupe : 195.0) Glucan endo-1,3-beta-glucosidase, basic isoform precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PpGns1) - Prunus persica (Peach) & (reliability: 1306.0) & (original description: Putative bgl, Description = Glucan endo-1,3-beta-glucosidase 5, PFAM = PF00332;PF07983)' T '35.1' 'not assigned.no ontology' 'niben101scf17719_23886-29374' '(at2g33550 : 281.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT4G31270.1); Has 743 Blast hits to 735 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 8; Plants - 568; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (reliability: 562.0) & (original description: Putative ASR3, Description = Trihelix transcription factor ASR3, PFAM = PF13837)' T '35.1' 'not assigned.no ontology' 'niben101scf17973_29910-36285' '(at5g53940 : 202.0) Yippee family putative zinc-binding protein; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: Yippee family putative zinc-binding protein (TAIR:AT2G40110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p59234|yipl_soltu : 163.0) Protein yippee-like - Solanum tuberosum (Potato) & (gnl|cdd|38609 : 156.0) no description available & (gnl|cdd|66871 : 126.0) no description available & (reliability: 404.0) & (original description: Putative ypel, Description = Protein yippee-like, PFAM = PF03226)' T '35.1' 'not assigned.no ontology' 'niben101scf18000_3035-18508' '(at3g14172 : 347.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G72410.1). & (reliability: 694.0) & (original description: Putative PGSC0003DMG400022906, Description = BnaA03g33240D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf18106_2150-10635' '(at4g13720 : 330.0) Inosine triphosphate pyrophosphatase family protein; FUNCTIONS IN: hydrolase activity, pyrophosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ham1-like protein (InterPro:IPR002637); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38432 : 267.0) no description available & (gnl|cdd|29953 : 198.0) no description available & (reliability: 660.0) & (original description: Putative itpa, Description = ITPase, PFAM = PF01725)' T '35.1' 'not assigned.no ontology' 'niben101scf18121_8-6100' '(at5g58740 : 286.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT4G27890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37476 : 159.0) no description available & (reliability: 572.0) & (original description: Putative pco073370, Description = Small heat shock protein 18.1, PFAM = PF04969)' T '35.1' 'not assigned.no ontology' 'niben101scf18245_40597-44289' '(at2g36290 : 474.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G74300.1); Has 970 Blast hits to 968 proteins in 224 species: Archae - 20; Bacteria - 476; Metazoa - 0; Fungi - 77; Plants - 313; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (reliability: 948.0) & (original description: Putative At2g36290, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12697)' T '35.1' 'not assigned.no ontology' 'niben101scf18254_13195-15888' '(gnl|cdd|28751 : 221.0) no description available & (at4g39730 : 208.0) Lipase/lipooxygenase, PLAT/LH2 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976); BEST Arabidopsis thaliana protein match is: Lipase/lipooxygenase, PLAT/LH2 family protein (TAIR:AT2G22170.1); Has 247 Blast hits to 225 proteins in 46 species: Archae - 0; Bacteria - 3; Metazoa - 94; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 416.0) & (original description: Putative TinI, Description = TMV-induced protein I, PFAM = PF01477)' T '35.1' 'not assigned.no ontology' 'niben101scf18589_102558-112291' '(at5g47540 : 534.0) Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT4G17270.1); Has 570 Blast hits to 568 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 142; Plants - 154; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|36779 : 428.0) no description available & (gnl|cdd|87570 : 365.0) no description available & (reliability: 1006.0) & (original description: Putative hymA, Description = Calcium-binding protein 39, PFAM = PF08569)' T '35.1' 'not assigned.no ontology' 'niben101scf18623_35596-60880' '(at5g23430 : 857.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G08390.1); Has 113227 Blast hits to 41164 proteins in 1010 species: Archae - 84; Bacteria - 11989; Metazoa - 46351; Fungi - 25015; Plants - 14725; Viruses - 6; Other Eukaryotes - 15057 (source: NCBI BLink). & (gnl|cdd|35488 : 585.0) no description available & (gnl|cdd|29257 : 201.0) no description available & (p93107|pf20_chlre : 104.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1714.0) & (original description: Putative kat80, Description = Katanin p80 WD40 repeat-containing subunit B1 homolog, PFAM = PF00400;PF00400;PF00400;PF00400;PF00400;PF13925)' T '35.1' 'not assigned.no ontology' 'niben101scf18637_11216-36517' '(at5g64440 : 201.0) AtFAAH (fatty acid amide hydrolase) modulates endogenous NAEs (N-Acylethanolamines) levels in plants by hydrolyzing NAEs to ethanolamine and their corresponding free fatty acids. NAE depletion likely participates in the regulation of plant growth.; fatty acid amide hydrolase (FAAH); FUNCTIONS IN: N-(long-chain-acyl)ethanolamine deacylase activity, amidase activity; INVOLVED IN: defense response to bacterium; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT3G25660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|30503 : 99.3) no description available & (gnl|cdd|36425 : 81.6) no description available & (reliability: 402.0) & (original description: Putative FAAH, Description = Fatty acid amide hydrolase, PFAM = PF01425)' T '35.1' 'not assigned.no ontology' 'niben101scf18637_13070-23491' '(at5g64440 : 529.0) AtFAAH (fatty acid amide hydrolase) modulates endogenous NAEs (N-Acylethanolamines) levels in plants by hydrolyzing NAEs to ethanolamine and their corresponding free fatty acids. NAE depletion likely participates in the regulation of plant growth.; fatty acid amide hydrolase (FAAH); FUNCTIONS IN: N-(long-chain-acyl)ethanolamine deacylase activity, amidase activity; INVOLVED IN: defense response to bacterium; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT3G25660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36425 : 282.0) no description available & (gnl|cdd|30503 : 267.0) no description available & (reliability: 1058.0) & (original description: Putative FAAH, Description = Fatty acid amide hydrolase, PFAM = PF01425;PF01425)' T '35.1' 'not assigned.no ontology' 'niben101scf18771_20877-23473' '(at2g37970 : 258.0) SOUL-1; FUNCTIONS IN: binding; INVOLVED IN: N-terminal protein myristoylation, red or far-red light signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SOUL haem-binding protein (InterPro:IPR006917); BEST Arabidopsis thaliana protein match is: SOUL heme-binding family protein (TAIR:AT3G10130.1); Has 1375 Blast hits to 1375 proteins in 156 species: Archae - 18; Bacteria - 186; Metazoa - 71; Fungi - 0; Plants - 173; Viruses - 0; Other Eukaryotes - 927 (source: NCBI BLink). & (gnl|cdd|68407 : 152.0) no description available & (reliability: 516.0) & (original description: Putative Sb03g039990, Description = Putative uncharacterized protein Sb03g039990, PFAM = PF04832)' T '35.1' 'not assigned.no ontology' 'niben101scf18822_206205-215216' '(at1g31780 : 946.0) CONTAINS InterPro DOMAIN/s: Conserved oligomeric complex COG6 (InterPro:IPR010490); Has 384 Blast hits to 379 proteins in 190 species: Archae - 0; Bacteria - 4; Metazoa - 151; Fungi - 156; Plants - 42; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|69913 : 619.0) no description available & (gnl|cdd|38962 : 615.0) no description available & (reliability: 1892.0) & (original description: Putative cog6, Description = Conserved oligomeric Golgi complex subunit 6, PFAM = PF06419)' T '35.1' 'not assigned.no ontology' 'niben101scf19138_11189-20176' '(at3g10970 : 480.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT4G11570.2); Has 3249 Blast hits to 3249 proteins in 1169 species: Archae - 14; Bacteria - 2940; Metazoa - 3; Fungi - 1; Plants - 144; Viruses - 0; Other Eukaryotes - 147 (source: NCBI BLink). & (gnl|cdd|30982 : 113.0) no description available & (reliability: 960.0) & (original description: Putative At3g10970, Description = Haloacid dehalogenase-like hydrolase, PFAM = PF13419)' T '35.1' 'not assigned.no ontology' 'niben101scf19261_27437-36387' '(at4g37470 : 397.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G03990.1); Has 8593 Blast hits to 8591 proteins in 1653 species: Archae - 86; Bacteria - 6869; Metazoa - 120; Fungi - 103; Plants - 302; Viruses - 19; Other Eukaryotes - 1094 (source: NCBI BLink). & (gnl|cdd|30941 : 97.9) no description available & (reliability: 794.0) & (original description: Putative KAI2, Description = Probable esterase KAI2, PFAM = PF00561)' T '35.1' 'not assigned.no ontology' 'niben101scf20039_65933-75066' '(at1g03620 : 323.0) ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT3G03610.1); Has 828 Blast hits to 828 proteins in 138 species: Archae - 0; Bacteria - 0; Metazoa - 491; Fungi - 41; Plants - 178; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|38208 : 232.0) no description available & (gnl|cdd|68305 : 212.0) no description available & (reliability: 646.0) & (original description: Putative , Description = ELMO/CED-12 family protein, PFAM = PF04727)' T '35.1' 'not assigned.no ontology' 'niben101scf20262_17116-24740' '(at5g42570 : 248.0) B-cell receptor-associated 31-like; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: B-cell receptor-associated protein 31-like (TAIR:AT1G11905.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37173 : 144.0) no description available & (reliability: 496.0) & (original description: Putative BnaC08g41750D, Description = BnaC08g41750D protein, PFAM = PF05529)' T '35.1' 'not assigned.no ontology' 'niben101scf20512_26648-31623' '(at3g15000 : 228.0) cobalt ion binding; FUNCTIONS IN: cobalt ion binding; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT3G06790.2); Has 57621 Blast hits to 29750 proteins in 1231 species: Archae - 14; Bacteria - 7130; Metazoa - 26978; Fungi - 8402; Plants - 8184; Viruses - 944; Other Eukaryotes - 5969 (source: NCBI BLink). & (q38732|dag_antma : 117.0) DAG protein, chloroplast precursor - Antirrhinum majus (Garden snapdragon) & (reliability: 456.0) & (original description: Putative DAG, Description = Plastid developmental protein DAG, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf20773_18597-39009' '(at5g51400 : 324.0) PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT2G45010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86720 : 98.5) no description available & (reliability: 616.0) & (original description: Putative CNR6, Description = Cell number regulator 6, PFAM = PF04749)' T '35.1' 'not assigned.no ontology' 'niben101scf20887_58354-70071' '(at3g10915 : 249.0) Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT2G15280.1). & (gnl|cdd|37003 : 167.0) no description available & (gnl|cdd|66169 : 148.0) no description available & (reliability: 498.0) & (original description: Putative RTNLB16, Description = Reticulon-like protein B16, PFAM = PF02453)' T '35.1' 'not assigned.no ontology' 'niben101scf20887_74101-79543' '(at1g06890 : 466.0) nodulin MtN21 /EamA-like transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide/sugar transporter family protein (TAIR:AT2G30460.2). & (gnl|cdd|36654 : 209.0) no description available & (gnl|cdd|66803 : 99.1) no description available & (reliability: 932.0) & (original description: Putative At1g06890, Description = Uncharacterized membrane protein At1g06890, PFAM = PF03151)' T '35.1' 'not assigned.no ontology' 'niben101scf20969_32510-41529' '(at1g32610 : 105.0) hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT2G35230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 191.0) & (original description: Putative IKU1, Description = AtVQ14, PFAM = PF05678)' T '35.1' 'not assigned.no ontology' 'niben101scf21408_29937-32658' '(at4g21192 : 112.0) Cytochrome c oxidase biogenesis protein Cmc1-like; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase biogenesis protein Cmc1-like (InterPro:IPR013892); Has 168 Blast hits to 168 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 95; Fungi - 41; Plants - 26; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative Sb06g017710, Description = Putative uncharacterized protein Sb06g017710, PFAM = PF08583)' T '35.1' 'not assigned.no ontology' 'niben101scf21574_15728-25362' '(at2g16405 : 701.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 17028 Blast hits to 11710 proteins in 500 species: Archae - 20; Bacteria - 2780; Metazoa - 6091; Fungi - 3873; Plants - 2093; Viruses - 0; Other Eukaryotes - 2171 (source: NCBI BLink). & (gnl|cdd|29257 : 118.0) no description available & (gnl|cdd|35487 : 106.0) no description available & (reliability: 1402.0) & (original description: Putative BnaA07g03630D, Description = BnaA07g03630D protein, PFAM = PF00400;PF00400)' T '35.1' 'not assigned.no ontology' 'niben101scf22015_209203-219734' '(at4g00290 : 528.0) Mechanosensitive ion channel protein; INVOLVED IN: transmembrane transport; LOCATED IN: chloroplast, membrane, chloroplast envelope; CONTAINS InterPro DOMAIN/s: Mechanosensitive ion channel MscS, transmembrane-2 (InterPro:IPR011014), Mechanosensitive ion channel MscS (InterPro:IPR006685), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G00234.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|64773 : 124.0) no description available & (reliability: 1056.0) & (original description: Putative MSCL2, Description = MscS-Like mechanosensitive ion channel MSCL2, PFAM = PF00924)' T '35.1' 'not assigned.no ontology' 'niben101scf22035_57183-73054' '(at5g52910 : 491.0) homolog of Drosophila timeless; TIMELESS (ATIM); CONTAINS InterPro DOMAIN/s: Timeless C-terminal (InterPro:IPR007725), Timeless protein (InterPro:IPR006906); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37185 : 387.0) no description available & (gnl|cdd|68597 : 115.0) no description available & (reliability: 982.0) & (original description: Putative ATIM, Description = , PFAM = PF04821;PF05029)' T '35.1' 'not assigned.no ontology' 'niben101scf22688_167158-174793' '(at1g10950 : 812.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis.; transmembrane nine 1 (TMN1); LOCATED IN: integral to membrane, Golgi apparatus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G37310.1); Has 1611 Blast hits to 1538 proteins in 326 species: Archae - 0; Bacteria - 16; Metazoa - 610; Fungi - 273; Plants - 454; Viruses - 0; Other Eukaryotes - 258 (source: NCBI BLink). & (gnl|cdd|36491 : 811.0) no description available & (gnl|cdd|66650 : 560.0) no description available & (reliability: 1624.0) & (original description: Putative TMN1, Description = Transmembrane 9 superfamily member 1, PFAM = PF02990)' T '35.1' 'not assigned.no ontology' 'niben101scf22781_11278-21456' '(at1g67230 : 464.0) Encodes a nuclear coiled-coil protein related to the carrot peripheral nuclear protein NMCP1 that is involved in the determination of plant nuclear structure.; LITTLE NUCLEI1 (LINC1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: nucleus organization; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nuclear matrix constituent protein-related (TAIR:AT1G13220.2); Has 314297 Blast hits to 138342 proteins in 3965 species: Archae - 3454; Bacteria - 70538; Metazoa - 123746; Fungi - 25476; Plants - 17143; Viruses - 1173; Other Eukaryotes - 72767 (source: NCBI BLink). & (gnl|cdd|35383 : 105.0) no description available & (reliability: 928.0) & (original description: Putative NMCP1, Description = Nuclear matrix constituent protein 1, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf23003_9318-18829' '(at5g50530 : 611.0) CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein (TAIR:AT5G50640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|73087 : 149.0) no description available & (reliability: 1222.0) & (original description: Putative CBSCBSPB4, Description = CBS domain-containing protein CBSCBSPB4, PFAM = PF00571;PF00571;PF00571;PF00571;PF00564)' T '35.1' 'not assigned.no ontology' 'niben101scf23113_102725-113170' '(at2g40600 : 295.0) appr-1-p processing enzyme family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Appr-1-p processing (InterPro:IPR002589); BEST Arabidopsis thaliana protein match is: appr-1-p processing enzyme family protein (TAIR:AT1G69340.1); Has 3775 Blast hits to 3643 proteins in 1376 species: Archae - 162; Bacteria - 2045; Metazoa - 672; Fungi - 129; Plants - 171; Viruses - 376; Other Eukaryotes - 220 (source: NCBI BLink). & (gnl|cdd|28848 : 222.0) no description available & (gnl|cdd|37844 : 150.0) no description available & (reliability: 590.0) & (original description: Putative ymdB, Description = O-acetyl-ADP-ribose deacetylase, PFAM = PF01661)' T '35.1' 'not assigned.no ontology' 'niben101scf23299_16977-20974' '(at4g37470 : 452.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G03990.1); Has 8593 Blast hits to 8591 proteins in 1653 species: Archae - 86; Bacteria - 6869; Metazoa - 120; Fungi - 103; Plants - 302; Viruses - 19; Other Eukaryotes - 1094 (source: NCBI BLink). & (gnl|cdd|30941 : 90.1) no description available & (reliability: 904.0) & (original description: Putative D14, Description = Strigolactone esterase D14, PFAM = PF00561)' T '35.1' 'not assigned.no ontology' 'niben101scf23814_51313-64054' '(at2g39570 : 479.0) ACT domain-containing protein; FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT-like superfamily protein (TAIR:AT2G36840.1); Has 465 Blast hits to 403 proteins in 46 species: Archae - 0; Bacteria - 48; Metazoa - 0; Fungi - 0; Plants - 388; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|80395 : 123.0) no description available & (reliability: 958.0) & (original description: Putative ACR9, Description = ACT domain-containing protein ACR9, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf24096_144680-150569' '(at2g33560 : 424.0) Encodes BUBR1. May have the spindle assembly checkpoint protein functions conserved from yeast to humans.; BUB1-related (BUB1: budding uninhibited by benzymidazol 1) (BUBR1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitotic cell cycle spindle assembly checkpoint; LOCATED IN: chromocenter, kinetochore; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Mitotic checkpoint serine/threonine protein kinase, Bub1 (InterPro:IPR015661), Mad3/BUB1 homology region 1 (InterPro:IPR013212); BEST Arabidopsis thaliana protein match is: Mad3/BUB1 homology region 1 (TAIR:AT5G05510.1). & (gnl|cdd|87489 : 155.0) no description available & (gnl|cdd|36381 : 140.0) no description available & (reliability: 848.0) & (original description: Putative BUBR1, Description = Mitotic spindle checkpoint protein BUBR1, PFAM = PF08311)' T '35.1' 'not assigned.no ontology' 'niben101scf25634_31335-43748' '(q43360|pir7b_orysa : 87.0) Esterase PIR7B (EC 3.1.-.-) - Oryza sativa (Rice) & (at3g50440 : 82.8) Encodes a protein shown to have methyl jasmonate esterase activity in vitro. This protein does not act on methyl IAA, MeSA, MeGA4, or MEGA9 in vitro.; methyl esterase 10 (MES10); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 1 (TAIR:AT2G23620.1); Has 1602 Blast hits to 1600 proteins in 360 species: Archae - 4; Bacteria - 838; Metazoa - 1; Fungi - 25; Plants - 612; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative MKS1a, Description = Methylketone synthase Ia, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf25768_32828-69650' '(at3g29770 : 391.0) Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.; methyl esterase 11 (MES11); FUNCTIONS IN: hydrolase activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 13 (TAIR:AT1G26360.1); Has 2947 Blast hits to 2945 proteins in 736 species: Archae - 12; Bacteria - 1724; Metazoa - 69; Fungi - 61; Plants - 638; Viruses - 1; Other Eukaryotes - 442 (source: NCBI BLink). & (q40708|pir7a_orysa : 145.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 782.0) & (original description: Putative MES11, Description = Putative methylesterase 11, chloroplastic, PFAM = PF00561)' T '35.1' 'not assigned.no ontology' 'niben101scf26545_43704-47403' '(at5g14030 : 178.0) translocon-associated protein beta (TRAPB) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translocon-associated beta (InterPro:IPR008856); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38527 : 118.0) no description available & (gnl|cdd|69286 : 107.0) no description available & (reliability: 356.0) & (original description: Putative At5g14030, Description = Translocon-associated protein subunit beta, PFAM = PF05753)' T '35.1' 'not assigned.no ontology' 'niben101scf27139_19299-25498' '(at2g05590 : 237.0) TLD-domain containing nucleolar protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TLDc (InterPro:IPR006571); BEST Arabidopsis thaliana protein match is: TLD-domain containing nucleolar protein (TAIR:AT4G39870.2); Has 907 Blast hits to 899 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 481; Fungi - 117; Plants - 118; Viruses - 0; Other Eukaryotes - 191 (source: NCBI BLink). & (gnl|cdd|37583 : 155.0) no description available & (gnl|cdd|87300 : 119.0) no description available & (reliability: 474.0) & (original description: Putative Ccrd_013568, Description = TLDc, PFAM = PF07534)' T '35.1' 'not assigned.no ontology' 'niben101scf27226_78063-81263' '(at1g51580 : 197.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 6723 Blast hits to 3876 proteins in 329 species: Archae - 3; Bacteria - 266; Metazoa - 4280; Fungi - 575; Plants - 1237; Viruses - 20; Other Eukaryotes - 342 (source: NCBI BLink). & (gnl|cdd|37401 : 120.0) no description available & (reliability: 394.0) & (original description: Putative At1g51580, Description = KH domain-containing protein, PFAM = PF00013)' T '35.1' 'not assigned.no ontology' 'niben101scf27793_283015-302270' '(at1g43130 : 326.0) like COV 2 (LCV2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF502 (InterPro:IPR007462); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF502) (TAIR:AT2G20120.1); Has 2432 Blast hits to 2432 proteins in 576 species: Archae - 20; Bacteria - 1089; Metazoa - 1; Fungi - 0; Plants - 154; Viruses - 0; Other Eukaryotes - 1168 (source: NCBI BLink). & (gnl|cdd|86633 : 176.0) no description available & (reliability: 652.0) & (original description: Putative COV1, Description = Like-COV protein, PFAM = PF04367)' T '35.1' 'not assigned.no ontology' 'niben101scf29015_39064-44217' '(at1g32080 : 620.0) membrane protein, putative; LOCATED IN: chloroplast, chloroplast inner membrane, membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LrgB-like protein (InterPro:IPR007300); Has 3603 Blast hits to 3592 proteins in 1271 species: Archae - 22; Bacteria - 3356; Metazoa - 0; Fungi - 58; Plants - 57; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). & (gnl|cdd|86566 : 111.0) no description available & (reliability: 1240.0) & (original description: Putative PLGG1, Description = Plastidal glycolate/glycerate translocator 1, chloroplastic, PFAM = PF04172)' T '35.1' 'not assigned.no ontology' 'niben101scf29047_60563-62989' '(at1g69340 : 107.0) appr-1-p processing enzyme family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Appr-1-p processing (InterPro:IPR002589); BEST Arabidopsis thaliana protein match is: appr-1-p processing enzyme family protein (TAIR:AT2G40600.1); Has 3597 Blast hits to 3538 proteins in 1210 species: Archae - 64; Bacteria - 1971; Metazoa - 984; Fungi - 140; Plants - 224; Viruses - 8; Other Eukaryotes - 206 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative BnaC02g19130D, Description = BnaC02g19130D protein, PFAM = )' T '35.1' 'not assigned.no ontology' 'niben101scf30252_139278-147291' '(at1g27430 : 356.0) GYF domain-containing protein; CONTAINS InterPro DOMAIN/s: GYF (InterPro:IPR003169); BEST Arabidopsis thaliana protein match is: GYF domain-containing protein (TAIR:AT1G24300.1); Has 16615 Blast hits to 9086 proteins in 533 species: Archae - 0; Bacteria - 846; Metazoa - 6412; Fungi - 1516; Plants - 946; Viruses - 78; Other Eukaryotes - 6817 (source: NCBI BLink). & (reliability: 712.0) & (original description: Putative At1g24300, Description = GYF domain-containing protein, PFAM = PF02213)' T '35.1' 'not assigned.no ontology' 'niben101scf31181_6060-11500' '(at2g23360 : 232.0) Plant protein of unknown function (DUF869); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G19835.2); Has 38218 Blast hits to 24021 proteins in 1620 species: Archae - 547; Bacteria - 4231; Metazoa - 19834; Fungi - 3463; Plants - 2306; Viruses - 121; Other Eukaryotes - 7716 (source: NCBI BLink). & (gnl|cdd|72813 : 156.0) no description available & (reliability: 464.0) & (original description: Putative PGSC0003DMG400025778, Description = Filament-like plant protein 7, putative isoform 1, PFAM = PF05911;PF05911;PF05911)' T '35.1' 'not assigned.no ontology' 'niben101scf31493_8494-12268' '(gnl|cdd|86752 : 142.0) no description available & (at2g27740 : 127.0) Family of unknown function (DUF662) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF662 (InterPro:IPR007033); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF662) (TAIR:AT2G36410.2); Has 1272 Blast hits to 1189 proteins in 227 species: Archae - 42; Bacteria - 139; Metazoa - 529; Fungi - 66; Plants - 146; Viruses - 5; Other Eukaryotes - 345 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative At2g27740, Description = At2g27740, PFAM = PF04949)' T '35.1' 'not assigned.no ontology' 'niben101scf32174_12924-18422' '(at1g29390 : 211.0) Integral membrane protein in the inner envelope of chloroplasts. Provide freezing tolerance.; cold regulated 314 thylakoid membrane 2 (COR314-TM2); CONTAINS InterPro DOMAIN/s: Cold acclimation WCOR413 (InterPro:IPR008892); BEST Arabidopsis thaliana protein match is: COLD REGULATED 314 INNER MEMBRANE 1 (TAIR:AT1G29395.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69104 : 157.0) no description available & (reliability: 422.0) & (original description: Putative COR413IM2, Description = Cold-regulated 413 inner membrane protein 2, chloroplastic, PFAM = PF05562)' T '35.1' 'not assigned.no ontology' 'niben101scf34386_23630-30767' '(at2g16860 : 340.0) GCIP-interacting family protein; CONTAINS InterPro DOMAIN/s: mRNA splicing factor SYF2 (InterPro:IPR013260); Has 2586 Blast hits to 2013 proteins in 293 species: Archae - 27; Bacteria - 123; Metazoa - 700; Fungi - 265; Plants - 138; Viruses - 7; Other Eukaryotes - 1326 (source: NCBI BLink). & (gnl|cdd|37820 : 152.0) no description available & (gnl|cdd|71665 : 138.0) no description available & (reliability: 680.0) & (original description: Putative At2g16860, Description = Expressed protein, PFAM = PF08231)' T '35.1' 'not assigned.no ontology' 'niben101scf34790_22896-27283' '(at5g02890 : 186.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT4G29250.1); Has 524 Blast hits to 524 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 520; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative PGSC0003DMG400020489, Description = Taxadien-5-alpha-ol O-acetyltransferase, PFAM = PF02458)' T '35.1' 'not assigned.no ontology' 'niben101scf35784_13191-18086' '(at2g37730 : 515.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT3G11420.1); Has 511 Blast hits to 500 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 144; Plants - 279; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|68226 : 291.0) no description available & (gnl|cdd|37457 : 223.0) no description available & (reliability: 1030.0) & (original description: Putative GT31C5, Description = Glycosyltransferase-like protein, PFAM = PF04646)' T '35.1' 'not assigned.no ontology' 'niben101scf37685_75459-82500' '(at2g26460 : 545.0) Encodes SMU2, a protein involved in RNA splicing.; SUPPRESSORS OF MEC-8 AND UNC-52 2 (SMU2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA splicing; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RED-like, N-terminal (InterPro:IPR012916), RED-like, C-terminal (InterPro:IPR012492); Has 470 Blast hits to 361 proteins in 150 species: Archae - 0; Bacteria - 2; Metazoa - 251; Fungi - 94; Plants - 62; Viruses - 3; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|37709 : 301.0) no description available & (gnl|cdd|87375 : 198.0) no description available & (reliability: 1090.0) & (original description: Putative SMU2, Description = Suppressor of mec-8 and unc-52 protein homolog 2, PFAM = PF07808;PF07807)' T '35.1' 'not assigned.no ontology' 'niben101scf37767_1327-6021' '(at1g08800 : 181.0) Protein of unknown function, DUF593; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT2G30690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68159 : 113.0) no description available & (reliability: 362.0) & (original description: Putative MYOB1, Description = Zein-binding domain-containing protein, PFAM = PF04576)' T '35.1' 'not assigned.no ontology' 'niben101scf38184_15764-26867' '(at4g22990 : 1051.0) Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein (TAIR:AT4G11810.1). & (gnl|cdd|37536 : 299.0) no description available & (gnl|cdd|66759 : 124.0) no description available & (reliability: 2102.0) & (original description: Putative At1g63010, Description = Putative SPX domain-containing membrane protein-like, PFAM = PF03105;PF07690)' T '35.1' 'not assigned.no ontology' 'niben101scf38186_330-5912' '(at5g13020 : 274.0) Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), ENT (InterPro:IPR005491); BEST Arabidopsis thaliana protein match is: Emsy N Terminus (ENT) domain-containing protein (TAIR:AT2G44440.1); Has 417 Blast hits to 397 proteins in 49 species: Archae - 0; Bacteria - 2; Metazoa - 101; Fungi - 4; Plants - 307; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|39874 : 152.0) no description available & (gnl|cdd|67356 : 105.0) no description available & (reliability: 548.0) & (original description: Putative rif1, Description = Emsy N Terminus/ plant Tudor-like domains-containing protein isoform 1, PFAM = PF03735)' T '35.1' 'not assigned.no ontology' 'niben101scf38847_2292-6299' '(at3g01660 : 343.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G29590.1); Has 1347 Blast hits to 1347 proteins in 403 species: Archae - 26; Bacteria - 759; Metazoa - 25; Fungi - 12; Plants - 94; Viruses - 0; Other Eukaryotes - 431 (source: NCBI BLink). & (gnl|cdd|36483 : 114.0) no description available & (reliability: 686.0) & (original description: Putative smtA, Description = SAM-dependent methyltransferase, PFAM = PF08241)' T '35.1.1' 'not assigned.no ontology.ABC1 family protein' 'nbv0.3scaffold11995_1-16078' '(at1g71810 : 525.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G79600.1); Has 10169 Blast hits to 10147 proteins in 1817 species: Archae - 128; Bacteria - 4438; Metazoa - 409; Fungi - 485; Plants - 724; Viruses - 16; Other Eukaryotes - 3969 (source: NCBI BLink). & (gnl|cdd|31005 : 210.0) no description available & (gnl|cdd|36449 : 121.0) no description available & (reliability: 1050.0) & (original description: Putative aarF, Description = ABC-1 domain-containing protein, PFAM = PF03109)' T '35.1.1' 'not assigned.no ontology.ABC1 family protein' 'nbv0.3scaffold27779_1-24877' '(at5g24970 : 622.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G79600.1). & (gnl|cdd|31005 : 324.0) no description available & (gnl|cdd|36449 : 279.0) no description available & (reliability: 1244.0) & (original description: Putative aarF, Description = Putative unusual protein kinase, PFAM = PF03109)' T '35.1.1' 'not assigned.no ontology.ABC1 family protein' 'nbv0.3scaffold37226_4983-14233' '(at3g24190 : 1016.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G79600.1); Has 10148 Blast hits to 10096 proteins in 1818 species: Archae - 124; Bacteria - 4457; Metazoa - 440; Fungi - 485; Plants - 717; Viruses - 16; Other Eukaryotes - 3909 (source: NCBI BLink). & (gnl|cdd|31005 : 323.0) no description available & (gnl|cdd|36449 : 261.0) no description available & (reliability: 2032.0) & (original description: Putative all4960, Description = All4960 protein, PFAM = PF03109)' T '35.1.1' 'not assigned.no ontology.ABC1 family protein' 'nbv0.3scaffold42210_7126-15284' '(at1g11390 : 767.0) Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G61640.1); Has 9400 Blast hits to 9333 proteins in 1787 species: Archae - 122; Bacteria - 4339; Metazoa - 436; Fungi - 531; Plants - 684; Viruses - 14; Other Eukaryotes - 3274 (source: NCBI BLink). & (gnl|cdd|36450 : 454.0) no description available & (gnl|cdd|31005 : 254.0) no description available & (reliability: 1534.0) & (original description: Putative At1g11390, Description = AarF domain-containing kinase, PFAM = PF03109)' T '35.1.1' 'not assigned.no ontology.ABC1 family protein' 'nbv0.3scaffold46260_4692-16640' '(at5g50330 : 714.0) Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G24810.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36449 : 342.0) no description available & (gnl|cdd|31005 : 241.0) no description available & (reliability: 1428.0) & (original description: Putative At5g50330, Description = At5g50330, PFAM = PF03109)' T '35.1.1' 'not assigned.no ontology.ABC1 family protein' 'nbv0.5scaffold256_128321-147417' '(at1g71810 : 753.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G79600.1); Has 10169 Blast hits to 10147 proteins in 1817 species: Archae - 128; Bacteria - 4438; Metazoa - 409; Fungi - 485; Plants - 724; Viruses - 16; Other Eukaryotes - 3969 (source: NCBI BLink). & (gnl|cdd|31005 : 309.0) no description available & (gnl|cdd|36449 : 201.0) no description available & (reliability: 1506.0) & (original description: Putative At1g71810, Description = Uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic, PFAM = PF03109)' T '35.1.1' 'not assigned.no ontology.ABC1 family protein' 'nbv0.5scaffold2135_317091-366732' '(at2g39190 : 847.0) member of ATH subfamily; ATATH8; FUNCTIONS IN: transporter activity; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G24970.2); Has 9890 Blast hits to 9844 proteins in 1785 species: Archae - 124; Bacteria - 4354; Metazoa - 432; Fungi - 482; Plants - 693; Viruses - 14; Other Eukaryotes - 3791 (source: NCBI BLink). & (gnl|cdd|31005 : 298.0) no description available & (gnl|cdd|36449 : 278.0) no description available & (reliability: 1694.0) & (original description: Putative ATATH8, Description = ATH subfamily protein ATH8, PFAM = PF01636;PF03109)' T '35.1.1' 'not assigned.no ontology.ABC1 family protein' 'nbv0.5scaffold2135_328527-357117' '(at2g39190 : 595.0) member of ATH subfamily; ATATH8; FUNCTIONS IN: transporter activity; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G24970.2); Has 9890 Blast hits to 9844 proteins in 1785 species: Archae - 124; Bacteria - 4354; Metazoa - 432; Fungi - 482; Plants - 693; Viruses - 14; Other Eukaryotes - 3791 (source: NCBI BLink). & (gnl|cdd|36449 : 273.0) no description available & (gnl|cdd|31005 : 259.0) no description available & (reliability: 1190.0) & (original description: Putative all4960, Description = Putative unusual protein kinase, PFAM = PF01636;PF03109)' T '35.1.1' 'not assigned.no ontology.ABC1 family protein' 'nbv0.5scaffold2850_7925-19413' '(at1g11390 : 799.0) Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G61640.1); Has 9400 Blast hits to 9333 proteins in 1787 species: Archae - 122; Bacteria - 4339; Metazoa - 436; Fungi - 531; Plants - 684; Viruses - 14; Other Eukaryotes - 3274 (source: NCBI BLink). & (gnl|cdd|36450 : 485.0) no description available & (gnl|cdd|31005 : 277.0) no description available & (reliability: 1598.0) & (original description: Putative At1g11390, Description = AarF domain-containing kinase, PFAM = PF03109)' T '35.1.1' 'not assigned.no ontology.ABC1 family protein' 'nbv0.5scaffold3468_72021-216012' '(at1g11390 : 495.0) Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G61640.1); Has 9400 Blast hits to 9333 proteins in 1787 species: Archae - 122; Bacteria - 4339; Metazoa - 436; Fungi - 531; Plants - 684; Viruses - 14; Other Eukaryotes - 3274 (source: NCBI BLink). & (gnl|cdd|36450 : 321.0) no description available & (gnl|cdd|31005 : 168.0) no description available & (reliability: 990.0) & (original description: Putative BnaA03g60660D, Description = BnaA03g60660D protein, PFAM = PF03109)' T '35.1.1' 'not assigned.no ontology.ABC1 family protein' 'niben044scf00010042ctg018_7607-23184' '(at2g39190 : 228.0) member of ATH subfamily; ATATH8; FUNCTIONS IN: transporter activity; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G24970.2); Has 9890 Blast hits to 9844 proteins in 1785 species: Archae - 124; Bacteria - 4354; Metazoa - 432; Fungi - 482; Plants - 693; Viruses - 14; Other Eukaryotes - 3791 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative ATATH8, Description = AarF domain kinase, PFAM = )' T '35.1.1' 'not assigned.no ontology.ABC1 family protein' 'niben044scf00034589ctg001_16191-23396' '(at3g07700 : 1061.0) Protein kinase superfamily protein; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ABC2 homolog 13 (TAIR:AT5G64940.2). & (gnl|cdd|31005 : 413.0) no description available & (gnl|cdd|36449 : 383.0) no description available & (reliability: 2122.0) & (original description: Putative aarF, Description = ABC1 family protein, PFAM = PF03109)' T '35.1.1' 'not assigned.no ontology.ABC1 family protein' 'niben101scf00536_493887-513140' '(at3g24190 : 1194.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G79600.1); Has 10148 Blast hits to 10096 proteins in 1818 species: Archae - 124; Bacteria - 4457; Metazoa - 440; Fungi - 485; Plants - 717; Viruses - 16; Other Eukaryotes - 3909 (source: NCBI BLink). & (gnl|cdd|31005 : 336.0) no description available & (gnl|cdd|36449 : 261.0) no description available & (reliability: 2388.0) & (original description: Putative ubiB, Description = Ubiquinone biosynthesis protein UbiB, PFAM = PF03109)' T '35.1.1' 'not assigned.no ontology.ABC1 family protein' 'niben101scf01052_591942-603559' '(at4g24810 : 714.0) similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147); Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G50330.1). & (gnl|cdd|36449 : 337.0) no description available & (gnl|cdd|31005 : 234.0) no description available & (reliability: 1428.0) & (original description: Putative At4g24810, Description = Protein kinase family protein, PFAM = PF03109)' T '35.1.1' 'not assigned.no ontology.ABC1 family protein' 'niben101scf01779_569068-595854' '(at5g24810 : 1204.0) ABC1 family protein; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Beta-lactamase-type transpeptidase fold (InterPro:IPR012338), Beta-lactamase-related (InterPro:IPR001466), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ABC2 homolog 13 (TAIR:AT5G64940.2). & (gnl|cdd|36449 : 400.0) no description available & (gnl|cdd|31005 : 277.0) no description available & (reliability: 2408.0) & (original description: Putative Os06g0701300, Description = ABC transporter-like, PFAM = PF00144;PF03109)' T '35.1.1' 'not assigned.no ontology.ABC1 family protein' 'niben101scf01779_593030-595821' '(at5g24810 : 207.0) ABC1 family protein; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Beta-lactamase-type transpeptidase fold (InterPro:IPR012338), Beta-lactamase-related (InterPro:IPR001466), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ABC2 homolog 13 (TAIR:AT5G64940.2). & (reliability: 414.0) & (original description: Putative , Description = Predicted protein, PFAM = )' T '35.1.1' 'not assigned.no ontology.ABC1 family protein' 'niben101scf02090_577285-599969' '(at1g71810 : 793.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G79600.1); Has 10169 Blast hits to 10147 proteins in 1817 species: Archae - 128; Bacteria - 4438; Metazoa - 409; Fungi - 485; Plants - 724; Viruses - 16; Other Eukaryotes - 3969 (source: NCBI BLink). & (gnl|cdd|31005 : 340.0) no description available & (gnl|cdd|36449 : 235.0) no description available & (reliability: 1586.0) & (original description: Putative At1g71810, Description = Uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic, PFAM = PF03109)' T '35.1.1' 'not assigned.no ontology.ABC1 family protein' 'niben101scf02778_433591-443270' '(at1g11390 : 738.0) Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G61640.1); Has 9400 Blast hits to 9333 proteins in 1787 species: Archae - 122; Bacteria - 4339; Metazoa - 436; Fungi - 531; Plants - 684; Viruses - 14; Other Eukaryotes - 3274 (source: NCBI BLink). & (gnl|cdd|36450 : 452.0) no description available & (gnl|cdd|31005 : 275.0) no description available & (reliability: 1476.0) & (original description: Putative abkC, Description = Putative serine/threonine-protein kinase abkC, PFAM = PF03109)' T '35.1.1' 'not assigned.no ontology.ABC1 family protein' 'niben101scf03079_21495-58037' '(at2g39190 : 863.0) member of ATH subfamily; ATATH8; FUNCTIONS IN: transporter activity; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G24970.2); Has 9890 Blast hits to 9844 proteins in 1785 species: Archae - 124; Bacteria - 4354; Metazoa - 432; Fungi - 482; Plants - 693; Viruses - 14; Other Eukaryotes - 3791 (source: NCBI BLink). & (gnl|cdd|31005 : 301.0) no description available & (gnl|cdd|36449 : 282.0) no description available & (reliability: 1726.0) & (original description: Putative ATATH8, Description = ATH subfamily protein ATH8, PFAM = PF03109)' T '35.1.1' 'not assigned.no ontology.ABC1 family protein' 'niben101scf03079_25357-46965' '(at2g39190 : 583.0) member of ATH subfamily; ATATH8; FUNCTIONS IN: transporter activity; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G24970.2); Has 9890 Blast hits to 9844 proteins in 1785 species: Archae - 124; Bacteria - 4354; Metazoa - 432; Fungi - 482; Plants - 693; Viruses - 14; Other Eukaryotes - 3791 (source: NCBI BLink). & (gnl|cdd|36449 : 274.0) no description available & (gnl|cdd|31005 : 257.0) no description available & (reliability: 1166.0) & (original description: Putative ATATH8, Description = AarF domain kinase, PFAM = PF01636;PF03109)' T '35.1.1' 'not assigned.no ontology.ABC1 family protein' 'niben101scf04044_1263537-1282295' '(at2g40090 : 802.0) member of ATH subfamily; ABC2 homolog 9 (ATH9); CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G65950.1); Has 9031 Blast hits to 8998 proteins in 1777 species: Archae - 124; Bacteria - 4320; Metazoa - 397; Fungi - 498; Plants - 701; Viruses - 9; Other Eukaryotes - 2982 (source: NCBI BLink). & (gnl|cdd|36449 : 443.0) no description available & (gnl|cdd|31005 : 246.0) no description available & (reliability: 1604.0) & (original description: Putative adck1, Description = Putative aarF domain-containing protein kinase 1, PFAM = PF03109)' T '35.1.1' 'not assigned.no ontology.ABC1 family protein' 'niben101scf04106_390400-402853' '(at1g11390 : 764.0) Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G61640.1); Has 9400 Blast hits to 9333 proteins in 1787 species: Archae - 122; Bacteria - 4339; Metazoa - 436; Fungi - 531; Plants - 684; Viruses - 14; Other Eukaryotes - 3274 (source: NCBI BLink). & (gnl|cdd|36450 : 458.0) no description available & (gnl|cdd|31005 : 257.0) no description available & (reliability: 1528.0) & (original description: Putative ADCK, Description = Putative serine/threonine-protein kinase abkC, PFAM = PF03109)' T '35.1.1' 'not assigned.no ontology.ABC1 family protein' 'niben101scf04727_211209-218978' '(at3g07700 : 1065.0) Protein kinase superfamily protein; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ABC2 homolog 13 (TAIR:AT5G64940.2). & (gnl|cdd|31005 : 417.0) no description available & (gnl|cdd|36449 : 387.0) no description available & (reliability: 2130.0) & (original description: Putative aarF, Description = ABC1 family protein, PFAM = PF03109)' T '35.1.1' 'not assigned.no ontology.ABC1 family protein' 'niben101scf05536_159770-187971' '(at1g11390 : 804.0) Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G61640.1); Has 9400 Blast hits to 9333 proteins in 1787 species: Archae - 122; Bacteria - 4339; Metazoa - 436; Fungi - 531; Plants - 684; Viruses - 14; Other Eukaryotes - 3274 (source: NCBI BLink). & (gnl|cdd|36450 : 471.0) no description available & (gnl|cdd|31005 : 269.0) no description available & (reliability: 1608.0) & (original description: Putative At1g11390, Description = AarF domain-containing kinase, PFAM = PF03109)' T '35.1.1' 'not assigned.no ontology.ABC1 family protein' 'niben101scf06778_88582-120624' '(at5g24970 : 917.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G79600.1). & (gnl|cdd|31005 : 365.0) no description available & (gnl|cdd|36449 : 276.0) no description available & (reliability: 1834.0) & (original description: Putative ubiB, Description = Ubiquinone biosynthesis protein UbiB, PFAM = PF03109)' T '35.1.1' 'not assigned.no ontology.ABC1 family protein' 'niben101scf08157_233081-237573' '(at1g11390 : 150.0) Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G61640.1); Has 9400 Blast hits to 9333 proteins in 1787 species: Archae - 122; Bacteria - 4339; Metazoa - 436; Fungi - 531; Plants - 684; Viruses - 14; Other Eukaryotes - 3274 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative ADCK, Description = Putative serine/threonine-protein kinase abkC, PFAM = )' T '35.1.1' 'not assigned.no ontology.ABC1 family protein' 'niben101scf15120_131139-149998' '(at5g50330 : 713.0) Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G24810.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36449 : 341.0) no description available & (gnl|cdd|31005 : 238.0) no description available & (reliability: 1426.0) & (original description: Putative ADCK, Description = ABC1 protein kinase, PFAM = PF03109)' T '35.1.2' 'not assigned.no ontology.agenet domain-containing protein' 'nbv0.3scaffold89076_1-4728' '(at1g11420 : 115.0) Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins.; DOMAIN OF UNKNOWN FUNCTION 724 2 (DUF2); FUNCTIONS IN: RNA binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395), Protein of unknown function DUF724 (InterPro:IPR007930); BEST Arabidopsis thaliana protein match is: DOMAIN OF UNKNOWN FUNCTION 724 6 (TAIR:AT2G47230.1); Has 603 Blast hits to 525 proteins in 93 species: Archae - 19; Bacteria - 36; Metazoa - 149; Fungi - 17; Plants - 302; Viruses - 1; Other Eukaryotes - 79 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative PGSC0003DMG400009053, Description = Domain of Uncharacterized protein function 724 6, putative isoform 1, PFAM = PF05641)' T '35.1.2' 'not assigned.no ontology.agenet domain-containing protein' 'nbv0.5scaffold83_376854-380950' '(at4g32440 : 225.0) Plant Tudor-like RNA-binding protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: Plant Tudor-like protein (TAIR:AT2G25590.1). & (reliability: 450.0) & (original description: Putative Os06g0600700, Description = Os06g0600700 protein, PFAM = PF05641;PF03735)' T '35.1.2' 'not assigned.no ontology.agenet domain-containing protein' 'nbv0.5scaffold387_526991-542949' '(at4g17330 : 499.0) gene of unknown function expressed in seedlings, flower buds and stems; G2484-1 protein (G2484-1); FUNCTIONS IN: RNA binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Agenet (InterPro:IPR008395), Tudor-like, plant (InterPro:IPR014002); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT1G68580.2); Has 6169 Blast hits to 4010 proteins in 631 species: Archae - 30; Bacteria - 1624; Metazoa - 1931; Fungi - 976; Plants - 400; Viruses - 26; Other Eukaryotes - 1182 (source: NCBI BLink). & (reliability: 998.0) & (original description: Putative PGSC0003DMG400004819, Description = G2484-1 protein, putative isoform 5, PFAM = PF05641)' T '35.1.2' 'not assigned.no ontology.agenet domain-containing protein' 'nbv0.5scaffold1980_303540-316916' '(at1g09320 : 176.0) agenet domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein (TAIR:AT3G06520.1); Has 769 Blast hits to 316 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 3; Plants - 733; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|86840 : 128.0) no description available & (reliability: 352.0) & (original description: Putative PGSC0003DMG400009053, Description = RNA binding protein, putative, PFAM = PF05641;PF05641;PF05641;PF05266)' T '35.1.2' 'not assigned.no ontology.agenet domain-containing protein' 'nbv0.5scaffold2129_325760-330119' '(at4g32440 : 197.0) Plant Tudor-like RNA-binding protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: Plant Tudor-like protein (TAIR:AT2G25590.1). & (reliability: 394.0) & (original description: Putative Os06g0600700, Description = Os06g0600700 protein, PFAM = PF03735;PF05641)' T '35.1.2' 'not assigned.no ontology.agenet domain-containing protein' 'nbv0.5scaffold6923_37776-45559' '(at5g42670 : 147.0) Agenet domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: Agenet domain-containing protein (TAIR:AT5G52070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative PGSC0003DMG400017259, Description = , PFAM = PF05641)' T '35.1.2' 'not assigned.no ontology.agenet domain-containing protein' 'nbv0.5scaffold6923_37782-49257' '(at5g42670 : 113.0) Agenet domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: Agenet domain-containing protein (TAIR:AT5G52070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative PGSC0003DMG400017259, Description = Agenet domain-containing protein, PFAM = )' T '35.1.2' 'not assigned.no ontology.agenet domain-containing protein' 'niben044scf00001317ctg002_1-6131' '(gnl|cdd|86840 : 121.0) no description available & (at3g62300 : 105.0) Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype; DOMAIN OF UNKNOWN FUNCTION 724 7 (DUF7); FUNCTIONS IN: RNA binding; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Agenet (InterPro:IPR008395), Tudor-like, plant (InterPro:IPR014002), Protein of unknown function DUF724 (InterPro:IPR007930); BEST Arabidopsis thaliana protein match is: DOMAIN OF UNKNOWN FUNCTION 724 6 (TAIR:AT2G47230.1). & (reliability: 210.0) & (original description: Putative PGSC0003DMG400009053, Description = , PFAM = PF05266)' T '35.1.2' 'not assigned.no ontology.agenet domain-containing protein' 'niben044scf00007402ctg002_7751-18067' '(at5g52070 : 154.0) Agenet domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: Agenet domain-containing protein (TAIR:AT5G42670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative At5g42670, Description = Agenet domain-containing protein, PFAM = PF05641)' T '35.1.2' 'not assigned.no ontology.agenet domain-containing protein' 'niben044scf00021109ctg010_2233-9532' '(gnl|cdd|86840 : 117.0) no description available & (at3g62300 : 82.8) Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype; DOMAIN OF UNKNOWN FUNCTION 724 7 (DUF7); FUNCTIONS IN: RNA binding; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Agenet (InterPro:IPR008395), Tudor-like, plant (InterPro:IPR014002), Protein of unknown function DUF724 (InterPro:IPR007930); BEST Arabidopsis thaliana protein match is: DOMAIN OF UNKNOWN FUNCTION 724 6 (TAIR:AT2G47230.1). & (reliability: 165.6) & (original description: Putative PGSC0003DMG400002584, Description = , PFAM = PF05641;PF05266)' T '35.1.2' 'not assigned.no ontology.agenet domain-containing protein' 'niben044scf00050128ctg000_22625-37871' '(at4g17330 : 499.0) gene of unknown function expressed in seedlings, flower buds and stems; G2484-1 protein (G2484-1); FUNCTIONS IN: RNA binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Agenet (InterPro:IPR008395), Tudor-like, plant (InterPro:IPR014002); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT1G68580.2); Has 6169 Blast hits to 4010 proteins in 631 species: Archae - 30; Bacteria - 1624; Metazoa - 1931; Fungi - 976; Plants - 400; Viruses - 26; Other Eukaryotes - 1182 (source: NCBI BLink). & (reliability: 998.0) & (original description: Putative PGSC0003DMG400004819, Description = , PFAM = PF05641)' T '35.1.2' 'not assigned.no ontology.agenet domain-containing protein' 'niben101scf00317_241686-257580' '(at4g17330 : 499.0) gene of unknown function expressed in seedlings, flower buds and stems; G2484-1 protein (G2484-1); FUNCTIONS IN: RNA binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Agenet (InterPro:IPR008395), Tudor-like, plant (InterPro:IPR014002); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT1G68580.2); Has 6169 Blast hits to 4010 proteins in 631 species: Archae - 30; Bacteria - 1624; Metazoa - 1931; Fungi - 976; Plants - 400; Viruses - 26; Other Eukaryotes - 1182 (source: NCBI BLink). & (reliability: 998.0) & (original description: Putative PGSC0003DMG400004819, Description = , PFAM = PF05641)' T '35.1.2' 'not assigned.no ontology.agenet domain-containing protein' 'niben101scf00561_87801-90467' '(at1g06340 : 112.0) Plant Tudor-like protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein (TAIR:AT1G09320.1); Has 263 Blast hits to 216 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 260; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative , Description = , PFAM = PF05641)' T '35.1.2' 'not assigned.no ontology.agenet domain-containing protein' 'niben101scf01710_96643-99059' '(at1g06340 : 118.0) Plant Tudor-like protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein (TAIR:AT1G09320.1); Has 263 Blast hits to 216 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 260; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative BnaC08g44730D, Description = BnaC08g44730D protein, PFAM = PF05641)' T '35.1.2' 'not assigned.no ontology.agenet domain-containing protein' 'niben101scf01764_369053-372891' '(at3g62300 : 92.8) Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype; DOMAIN OF UNKNOWN FUNCTION 724 7 (DUF7); FUNCTIONS IN: RNA binding; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Agenet (InterPro:IPR008395), Tudor-like, plant (InterPro:IPR014002), Protein of unknown function DUF724 (InterPro:IPR007930); BEST Arabidopsis thaliana protein match is: DOMAIN OF UNKNOWN FUNCTION 724 6 (TAIR:AT2G47230.1). & (gnl|cdd|86840 : 92.7) no description available & (reliability: 185.6) & (original description: Putative , Description = , PFAM = PF05266)' T '35.1.2' 'not assigned.no ontology.agenet domain-containing protein' 'niben101scf02831_719122-726421' '(gnl|cdd|86840 : 117.0) no description available & (at3g62300 : 88.2) Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype; DOMAIN OF UNKNOWN FUNCTION 724 7 (DUF7); FUNCTIONS IN: RNA binding; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Agenet (InterPro:IPR008395), Tudor-like, plant (InterPro:IPR014002), Protein of unknown function DUF724 (InterPro:IPR007930); BEST Arabidopsis thaliana protein match is: DOMAIN OF UNKNOWN FUNCTION 724 6 (TAIR:AT2G47230.1). & (reliability: 176.4) & (original description: Putative PGSC0003DMG400002584, Description = , PFAM = PF05641;PF05266)' T '35.1.2' 'not assigned.no ontology.agenet domain-containing protein' 'niben101scf02944_140903-144849' '(at4g32440 : 218.0) Plant Tudor-like RNA-binding protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: Plant Tudor-like protein (TAIR:AT2G25590.1). & (reliability: 436.0) & (original description: Putative , Description = , PFAM = PF03735;PF05641)' T '35.1.2' 'not assigned.no ontology.agenet domain-containing protein' 'niben101scf04827_480827-490236' '(at1g09320 : 225.0) agenet domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein (TAIR:AT3G06520.1); Has 769 Blast hits to 316 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 3; Plants - 733; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 450.0) & (original description: Putative At1g09320, Description = Agenet domain-containing protein, putative isoform 6, PFAM = PF05641;PF05641)' T '35.1.2' 'not assigned.no ontology.agenet domain-containing protein' 'niben101scf06279_45772-257903' '(at5g42670 : 116.0) Agenet domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: Agenet domain-containing protein (TAIR:AT5G52070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative At5g42670, Description = Agenet domain-containing protein, PFAM = )' T '35.1.2' 'not assigned.no ontology.agenet domain-containing protein' 'niben101scf10248_12292-14696' '(at1g06340 : 96.7) Plant Tudor-like protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein (TAIR:AT1G09320.1); Has 263 Blast hits to 216 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 260; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative , Description = , PFAM = PF05641)' T '35.1.2' 'not assigned.no ontology.agenet domain-containing protein' 'niben101scf10505_79299-83803' '(at4g32440 : 192.0) Plant Tudor-like RNA-binding protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: Plant Tudor-like protein (TAIR:AT2G25590.1). & (reliability: 384.0) & (original description: Putative Os06g0600700, Description = Os06g0600700 protein, PFAM = PF03735;PF05641)' T '35.1.2' 'not assigned.no ontology.agenet domain-containing protein' 'niben101scf11894_82659-91396' '(at1g09320 : 177.0) agenet domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein (TAIR:AT3G06520.1); Has 769 Blast hits to 316 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 3; Plants - 733; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|86840 : 124.0) no description available & (reliability: 354.0) & (original description: Putative PGSC0003DMG400009053, Description = RNA binding protein, putative, PFAM = PF05266;PF05641;PF05641;PF05641)' T '35.1.2' 'not assigned.no ontology.agenet domain-containing protein' 'niben101scf17858_68456-83070' '(at5g42670 : 159.0) Agenet domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: Agenet domain-containing protein (TAIR:AT5G52070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative PGSC0003DMG400017259, Description = Agenet domain-containing protein, PFAM = PF05641)' T '35.1.2' 'not assigned.no ontology.agenet domain-containing protein' 'niben101scf18540_76455-89620' '(at5g42670 : 161.0) Agenet domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: Agenet domain-containing protein (TAIR:AT5G52070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative PGSC0003DMG400017259, Description = Agenet domain-containing protein, PFAM = PF05641)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'nbv0.3scaffold1116_367-8886' '(at4g33945 : 486.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39400 : 343.0) no description available & (reliability: 972.0) & (original description: Putative At4g33940, Description = Armadillo repeat-containing protein, putative, PFAM = )' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'nbv0.3scaffold16703_28403-32139' '(at4g31890 : 436.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G25130.1). & (reliability: 872.0) & (original description: Putative At4g31890, Description = Armadillo/beta-catenin-like repeat-containing protein, PFAM = )' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'nbv0.3scaffold17712_20642-30758' '(at5g19330 : 881.0) Encodes an armadillo repeat protein involved in the abscisic acid response. The protein interacts with a transcription factor, ABF2, which controls ABA-dependent gene expression via the G-box-type ABA-responsive elements.; ARM repeat protein interacting with ABF2 (ARIA); FUNCTIONS IN: protein binding; INVOLVED IN: response to salt stress, negative regulation of seed germination, response to abscisic acid stimulus; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Armadillo-like helical (InterPro:IPR011989), BTB/POZ fold (InterPro:IPR011333), Armadillo (InterPro:IPR000225), BTB/POZ-like (InterPro:IPR000210), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARMADILLO BTB protein 1 (TAIR:AT5G13060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39425 : 109.0) no description available & (gnl|cdd|84929 : 88.1) no description available & (reliability: 1762.0) & (original description: Putative ARIA, Description = ARM REPEAT PROTEIN INTERACTING WITH ABF2, PFAM = PF00514;PF00514;PF00514;PF00514;PF00651)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'nbv0.3scaffold31825_895-5739' '(at5g66200 : 828.0) Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues, anthers and ovules.; armadillo repeat only 2 (ARO2); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: armadillo repeat only 1 (TAIR:AT4G34940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1656.0) & (original description: Putative ARO2, Description = Armadillo repeat only 2 protein, PFAM = PF00514)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'nbv0.3scaffold45043_1-6358' '(at3g09350 : 326.0) Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150). Fes1A is cytosolic and associates with cytosolic Hsp70. Mutants showed increased heat-sensitive phenotype suggestion the involvement of Fes1A in acquired thermotolerance. Does not have nucleotide exchange factor activity in vitro.; Fes1A (Fes1A); CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1B (TAIR:AT3G53800.1); Has 594 Blast hits to 590 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 194; Fungi - 149; Plants - 182; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|37371 : 209.0) no description available & (reliability: 652.0) & (original description: Putative Fes1A, Description = Protein Fes1A, PFAM = PF08609)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'nbv0.3scaffold56364_3302-12574' '(at1g13160 : 572.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function, nucleolar NUC130/133, N-terminal (InterPro:IPR012977), Armadillo-type fold (InterPro:IPR016024), SDA1 (InterPro:IPR007949); BEST Arabidopsis thaliana protein match is: SDA1 family protein (TAIR:AT4G31520.1); Has 29206 Blast hits to 13573 proteins in 931 species: Archae - 207; Bacteria - 10267; Metazoa - 6952; Fungi - 3668; Plants - 1163; Viruses - 549; Other Eukaryotes - 6400 (source: NCBI BLink). & (gnl|cdd|37440 : 571.0) no description available & (gnl|cdd|86842 : 189.0) no description available & (reliability: 1098.0) & (original description: Putative BnaC08g40520D, Description = BnaC08g40520D protein, PFAM = PF05285;PF08158)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'nbv0.5scaffold1159_18960-26878' '(at3g09350 : 305.0) Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150). Fes1A is cytosolic and associates with cytosolic Hsp70. Mutants showed increased heat-sensitive phenotype suggestion the involvement of Fes1A in acquired thermotolerance. Does not have nucleotide exchange factor activity in vitro.; Fes1A (Fes1A); CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1B (TAIR:AT3G53800.1); Has 594 Blast hits to 590 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 194; Fungi - 149; Plants - 182; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|37371 : 180.0) no description available & (reliability: 610.0) & (original description: Putative Fes1A, Description = Protein Fes1A, PFAM = PF08609)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'nbv0.5scaffold2826_77457-86104' '(at1g51350 : 644.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid lumen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); Has 1374 Blast hits to 1058 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 493; Fungi - 490; Plants - 280; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|36507 : 341.0) no description available & (reliability: 1288.0) & (original description: Putative Sb05g025510, Description = Putative uncharacterized protein Sb05g025510, PFAM = PF00514)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben044scf00000538ctg017_36134-41204' '(at5g47540 : 293.0) Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT4G17270.1); Has 570 Blast hits to 568 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 142; Plants - 154; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|36779 : 242.0) no description available & (gnl|cdd|87570 : 224.0) no description available & (reliability: 586.0) & (original description: Putative hymA, Description = Conidiophore development protein hymA, PFAM = PF08569)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben044scf00010608ctg008_20886-25581' '(at4g34940 : 817.0) Armadillo repeat protein. One of a family of four in Arabidopsis. Located in the nucleus and cytoplasm of pollen vegetative cells, and in the cytoplasm of egg cells. Involved in the signaling network controlling tip growth and actin organization in the pollen tube.; armadillo repeat only 1 (ARO1); FUNCTIONS IN: binding; INVOLVED IN: pollen tube growth, actin cytoskeleton organization; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: armadillo repeat only 2 (TAIR:AT5G66200.1); Has 661 Blast hits to 627 proteins in 126 species: Archae - 0; Bacteria - 2; Metazoa - 165; Fungi - 76; Plants - 317; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (reliability: 1634.0) & (original description: Putative ARO1, Description = Armadillo/beta-catenin-like repeat family protein, expressed, PFAM = )' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben044scf00016019ctg004_806-4692' '(at1g23180 : 248.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G67340.1); Has 2470 Blast hits to 1640 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 613; Fungi - 372; Plants - 1309; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (reliability: 496.0) & (original description: Putative At1g23180, Description = At1g23180, PFAM = )' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben044scf00018084ctg005_14837-24613' '(at4g32050 : 602.0) neurochondrin family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), Neurochondrin (InterPro:IPR008709); Has 174 Blast hits to 168 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 7; Plants - 49; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|69078 : 368.0) no description available & (gnl|cdd|37822 : 325.0) no description available & (reliability: 1204.0) & (original description: Putative , Description = Neurochondrin, PFAM = PF05536;PF05536)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben044scf00022240ctg001_12379-21415' '(at5g19330 : 1002.0) Encodes an armadillo repeat protein involved in the abscisic acid response. The protein interacts with a transcription factor, ABF2, which controls ABA-dependent gene expression via the G-box-type ABA-responsive elements.; ARM repeat protein interacting with ABF2 (ARIA); FUNCTIONS IN: protein binding; INVOLVED IN: response to salt stress, negative regulation of seed germination, response to abscisic acid stimulus; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Armadillo-like helical (InterPro:IPR011989), BTB/POZ fold (InterPro:IPR011333), Armadillo (InterPro:IPR000225), BTB/POZ-like (InterPro:IPR000210), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARMADILLO BTB protein 1 (TAIR:AT5G13060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39425 : 109.0) no description available & (gnl|cdd|84929 : 97.7) no description available & (reliability: 2004.0) & (original description: Putative Sb09g019610, Description = Putative uncharacterized protein Sb09g019610, PFAM = PF00514;PF00514;PF00514;PF00514;PF00651)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben044scf00027829ctg004_1-6661' '(at5g18940 : 422.0) Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT5G47540.1); Has 565 Blast hits to 563 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 217; Fungi - 137; Plants - 151; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|36779 : 346.0) no description available & (gnl|cdd|87570 : 341.0) no description available & (reliability: 844.0) & (original description: Putative hymA, Description = Calcium-binding protein 39, PFAM = PF08569)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben044scf00033646ctg001_735-3313' '(at5g47540 : 150.0) Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT4G17270.1); Has 570 Blast hits to 568 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 142; Plants - 154; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|36779 : 105.0) no description available & (reliability: 300.0) & (original description: Putative dl4670w, Description = Putative MO25-like protein At4g17270, PFAM = PF08569)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben044scf00034174ctg001_1-4303' '(at5g47540 : 228.0) Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT4G17270.1); Has 570 Blast hits to 568 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 142; Plants - 154; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|36779 : 204.0) no description available & (gnl|cdd|87570 : 187.0) no description available & (reliability: 456.0) & (original description: Putative MO25, Description = Protein Mo25, PFAM = PF08569)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben044scf00038524ctg000_1-4127' '(at4g16490 : 417.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G01400.1); Has 4881 Blast hits to 3043 proteins in 255 species: Archae - 2; Bacteria - 6; Metazoa - 869; Fungi - 533; Plants - 2917; Viruses - 0; Other Eukaryotes - 554 (source: NCBI BLink). & (q64ha9|spl11_orysa : 162.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|39425 : 80.1) no description available & (reliability: 834.0) & (original description: Putative At4g16490, Description = Armadillo/beta-catenin-like repeat-containing protein, PFAM = PF00514)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben044scf00043176ctg004_4963-8991' '(at1g61350 : 566.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G45720.2); Has 1255 Blast hits to 1059 proteins in 157 species: Archae - 0; Bacteria - 2; Metazoa - 269; Fungi - 116; Plants - 761; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 1132.0) & (original description: Putative At1g61350, Description = Armadillo/beta-catenin-like repeat-containing protein, PFAM = PF00514)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf00303_17021-22113' '(at5g47540 : 201.0) Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT4G17270.1); Has 570 Blast hits to 568 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 142; Plants - 154; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|36779 : 163.0) no description available & (gnl|cdd|87570 : 161.0) no description available & (reliability: 402.0) & (original description: Putative hymA, Description = Conidiophore development protein hymA, PFAM = PF08569)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf00497_172635-191179' '(at1g23180 : 779.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G67340.1); Has 2470 Blast hits to 1640 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 613; Fungi - 372; Plants - 1309; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (reliability: 1558.0) & (original description: Putative At1g23180, Description = Armadillo/beta-catenin-like repeat-containing protein, PFAM = )' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf00629_47103-57750' '(at1g51350 : 636.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid lumen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); Has 1374 Blast hits to 1058 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 493; Fungi - 490; Plants - 280; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|36507 : 343.0) no description available & (reliability: 1272.0) & (original description: Putative Sb05g025510, Description = Putative uncharacterized protein Sb05g025510, PFAM = PF00514)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf00674_68767-74132' '(at5g66200 : 805.0) Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues, anthers and ovules.; armadillo repeat only 2 (ARO2); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: armadillo repeat only 1 (TAIR:AT4G34940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1610.0) & (original description: Putative ARO2, Description = Armadillo repeat only 2 protein, PFAM = PF00514)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf00811_420597-424303' '(at2g05810 : 489.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G45720.2); Has 3013 Blast hits to 2075 proteins in 241 species: Archae - 0; Bacteria - 0; Metazoa - 567; Fungi - 298; Plants - 1810; Viruses - 0; Other Eukaryotes - 338 (source: NCBI BLink). & (reliability: 978.0) & (original description: Putative At2g05810, Description = Armadillo/beta-catenin-like repeats-containing protein, PFAM = PF00514;PF03224)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf00952_42798-55380' '(at5g18940 : 484.0) Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT5G47540.1); Has 565 Blast hits to 563 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 217; Fungi - 137; Plants - 151; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|36779 : 381.0) no description available & (gnl|cdd|87570 : 367.0) no description available & (reliability: 968.0) & (original description: Putative hymA, Description = Calcium-binding protein 39, PFAM = PF08569)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf00994_714156-717891' '(at4g31890 : 458.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G25130.1). & (reliability: 916.0) & (original description: Putative At4g31890, Description = Armadillo/beta-catenin-like repeat-containing protein, PFAM = )' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf01063_815468-828908' '(at1g50240 : 1412.0) The FUSED (FU) gene belongs to Ser/Thr protein kinase family and has a key role in the hedgehog signaling pathway known to control cell proliferation and patterning in fruit flies and humans . Arabidopsis thaliana genome has a single Fu gene. Cytokinesis-defective mutants, which we named two-in-one (tio), result from mutations in Arabidopsis Fu. Phenotypic analysis of tio mutants reveals an essential role for TIO in conventional modes of cytokinesis in plant meristems and during male gametogenesis. TIO is tightly localized to the midline of the nascent phragmoplast and remains associated with the expanding phragmoplast ring. This gene was previously annotated as two gene models, AT1G50230.1 and AT1G50240.1, however the experimental evidence exists (Oh et al, Current Biology, 2005) showing that these two models are in fact single gene, named FUSED.; FUSED (FU); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), 26S proteasome non-ATPase regulatory subunit 5 (InterPro:IPR019538), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: serine/threonine protein kinase 2 (TAIR:AT3G08720.2); Has 138334 Blast hits to 135590 proteins in 4834 species: Archae - 164; Bacteria - 15793; Metazoa - 51363; Fungi - 13983; Plants - 33508; Viruses - 544; Other Eukaryotes - 22979 (source: NCBI BLink). & (gnl|cdd|35817 : 429.0) no description available & (gnl|cdd|29142 : 296.0) no description available & (q6x4a2|cipk1_orysa : 133.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 2824.0) & (original description: Putative TIO, Description = Serine/threonine-protein kinase TIO, PFAM = PF02985;PF00069)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf01102_24433-28375' '(at1g08315 : 300.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein with ARM repeat domain (TAIR:AT2G23140.2); Has 1129 Blast hits to 1121 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 29; Fungi - 8; Plants - 1079; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (q64ha9|spl11_orysa : 99.4) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 600.0) & (original description: Putative Os01g0956075, Description = Armadillo/beta-catenin repeat-like, PFAM = PF00514)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf01213_47054-57006' '(at4g32050 : 597.0) neurochondrin family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), Neurochondrin (InterPro:IPR008709); Has 174 Blast hits to 168 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 7; Plants - 49; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|69078 : 369.0) no description available & (gnl|cdd|37822 : 329.0) no description available & (reliability: 1194.0) & (original description: Putative , Description = Neurochondrin, PFAM = PF05536;PF05536)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf01653_373120-380123' '(at3g09350 : 480.0) Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150). Fes1A is cytosolic and associates with cytosolic Hsp70. Mutants showed increased heat-sensitive phenotype suggestion the involvement of Fes1A in acquired thermotolerance. Does not have nucleotide exchange factor activity in vitro.; Fes1A (Fes1A); CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1B (TAIR:AT3G53800.1); Has 594 Blast hits to 590 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 194; Fungi - 149; Plants - 182; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|37371 : 247.0) no description available & (reliability: 960.0) & (original description: Putative Fes1A, Description = Protein Fes1A, PFAM = PF08609)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf01832_3430-12702' '(at4g31520 : 457.0) SDA1 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Domain of unknown function, nucleolar NUC130/133, N-terminal (InterPro:IPR012977), Armadillo-type fold (InterPro:IPR016024), SDA1 (InterPro:IPR007949); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G13160.1); Has 8756 Blast hits to 5682 proteins in 453 species: Archae - 14; Bacteria - 613; Metazoa - 3270; Fungi - 1126; Plants - 516; Viruses - 196; Other Eukaryotes - 3021 (source: NCBI BLink). & (gnl|cdd|37440 : 453.0) no description available & (gnl|cdd|86842 : 186.0) no description available & (reliability: 914.0) & (original description: Putative BnaC08g40520D, Description = BnaC08g40520D protein, PFAM = PF08158;PF05285)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf01958_191132-200675' '(at5g47540 : 530.0) Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT4G17270.1); Has 570 Blast hits to 568 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 142; Plants - 154; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|36779 : 432.0) no description available & (gnl|cdd|87570 : 359.0) no description available & (reliability: 1060.0) & (original description: Putative hymA, Description = Calcium-binding protein 39, PFAM = PF08569)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf02021_245586-257065' '(at5g19330 : 1003.0) Encodes an armadillo repeat protein involved in the abscisic acid response. The protein interacts with a transcription factor, ABF2, which controls ABA-dependent gene expression via the G-box-type ABA-responsive elements.; ARM repeat protein interacting with ABF2 (ARIA); FUNCTIONS IN: protein binding; INVOLVED IN: response to salt stress, negative regulation of seed germination, response to abscisic acid stimulus; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Armadillo-like helical (InterPro:IPR011989), BTB/POZ fold (InterPro:IPR011333), Armadillo (InterPro:IPR000225), BTB/POZ-like (InterPro:IPR000210), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARMADILLO BTB protein 1 (TAIR:AT5G13060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39425 : 110.0) no description available & (gnl|cdd|84929 : 98.1) no description available & (reliability: 2006.0) & (original description: Putative ARIA, Description = ARM REPEAT PROTEIN INTERACTING WITH ABF2, PFAM = PF00514;PF00514;PF00514;PF00651)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf02048_118080-123553' '(at4g16490 : 430.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G01400.1); Has 4881 Blast hits to 3043 proteins in 255 species: Archae - 2; Bacteria - 6; Metazoa - 869; Fungi - 533; Plants - 2917; Viruses - 0; Other Eukaryotes - 554 (source: NCBI BLink). & (q64ha9|spl11_orysa : 162.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 860.0) & (original description: Putative At4g16490, Description = Armadillo/beta-catenin-like repeat-containing protein, PFAM = PF00514)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf02153_134499-138408' '(at3g01400 : 498.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G58680.1); Has 6122 Blast hits to 3580 proteins in 271 species: Archae - 0; Bacteria - 2; Metazoa - 1843; Fungi - 536; Plants - 3048; Viruses - 0; Other Eukaryotes - 693 (source: NCBI BLink). & (q64ha9|spl11_orysa : 194.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|39425 : 90.1) no description available & (reliability: 996.0) & (original description: Putative At5g58680, Description = ARM repeat superfamily protein, PFAM = PF00514;PF00514;PF00514)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf02583_616827-620803' '(at5g66200 : 911.0) Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues, anthers and ovules.; armadillo repeat only 2 (ARO2); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: armadillo repeat only 1 (TAIR:AT4G34940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1822.0) & (original description: Putative ARO2, Description = Armadillo repeat only 2 protein, PFAM = PF00514)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf02740_846229-851369' '(at3g03440 : 312.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G12710.1); Has 4476 Blast hits to 2974 proteins in 239 species: Archae - 0; Bacteria - 8; Metazoa - 931; Fungi - 611; Plants - 2534; Viruses - 0; Other Eukaryotes - 392 (source: NCBI BLink). & (q64ha9|spl11_orysa : 84.7) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 624.0) & (original description: Putative Os01g0112500, Description = Os01g0112500 protein, PFAM = PF00514)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf03045_1078156-1082009' '(at3g26600 : 567.0) Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues, anthers and ovules.; armadillo repeat only 4 (ARO4); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: armadillo repeat only 2 (TAIR:AT5G66200.1); Has 868 Blast hits to 710 proteins in 130 species: Archae - 0; Bacteria - 0; Metazoa - 111; Fungi - 191; Plants - 457; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 1134.0) & (original description: Putative ARO4, Description = Armadillo repeat only 4 protein, PFAM = PF00514)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf03271_245368-248903' '(at3g20170 : 390.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein with ARM repeat domain (TAIR:AT2G23140.2); Has 3151 Blast hits to 1598 proteins in 216 species: Archae - 4; Bacteria - 31; Metazoa - 442; Fungi - 499; Plants - 1924; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (gnl|cdd|39425 : 266.0) no description available & (reliability: 780.0) & (original description: Putative At3g20170, Description = Armadillo/beta-catenin-like repeat-containing protein, PFAM = PF00514;PF00514)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf03945_61119-64920' '(at2g45720 : 643.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G01830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1286.0) & (original description: Putative At2g45720, Description = Armadillo/beta-catenin repeat-containing protein, PFAM = PF00514)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf03953_361356-368028' '(at4g33945 : 366.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39400 : 292.0) no description available & (reliability: 732.0) & (original description: Putative At4g33940, Description = Armadillo repeat-containing protein, putative, PFAM = )' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf03966_11388-17733' '(at3g09350 : 511.0) Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150). Fes1A is cytosolic and associates with cytosolic Hsp70. Mutants showed increased heat-sensitive phenotype suggestion the involvement of Fes1A in acquired thermotolerance. Does not have nucleotide exchange factor activity in vitro.; Fes1A (Fes1A); CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1B (TAIR:AT3G53800.1); Has 594 Blast hits to 590 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 194; Fungi - 149; Plants - 182; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (gnl|cdd|37371 : 294.0) no description available & (reliability: 1022.0) & (original description: Putative Fes1A, Description = Protein Fes1A, PFAM = PF08609)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf04122_596750-600626' '(at1g61350 : 572.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G45720.2); Has 1255 Blast hits to 1059 proteins in 157 species: Archae - 0; Bacteria - 2; Metazoa - 269; Fungi - 116; Plants - 761; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 1144.0) & (original description: Putative At1g61350, Description = Armadillo/beta-catenin-like repeat-containing protein, PFAM = PF00514)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf04171_216171-219964' '(at5g66200 : 725.0) Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues, anthers and ovules.; armadillo repeat only 2 (ARO2); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: armadillo repeat only 1 (TAIR:AT4G34940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1450.0) & (original description: Putative ARO2, Description = Armadillo repeat only 2 protein, PFAM = PF00514)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf04205_258767-265713' '(at5g47540 : 440.0) Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT4G17270.1); Has 570 Blast hits to 568 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 142; Plants - 154; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|36779 : 390.0) no description available & (gnl|cdd|87570 : 332.0) no description available & (reliability: 880.0) & (original description: Putative hymA, Description = Calcium-binding protein 39, PFAM = PF08569)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf04223_195897-200285' '(at4g34940 : 814.0) Armadillo repeat protein. One of a family of four in Arabidopsis. Located in the nucleus and cytoplasm of pollen vegetative cells, and in the cytoplasm of egg cells. Involved in the signaling network controlling tip growth and actin organization in the pollen tube.; armadillo repeat only 1 (ARO1); FUNCTIONS IN: binding; INVOLVED IN: pollen tube growth, actin cytoskeleton organization; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: armadillo repeat only 2 (TAIR:AT5G66200.1); Has 661 Blast hits to 627 proteins in 126 species: Archae - 0; Bacteria - 2; Metazoa - 165; Fungi - 76; Plants - 317; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (reliability: 1628.0) & (original description: Putative Sb01g041260, Description = Putative uncharacterized protein Sb01g041260, PFAM = )' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf04551_258560-266365' '(at5g47540 : 451.0) Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT4G17270.1); Has 570 Blast hits to 568 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 142; Plants - 154; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|36779 : 390.0) no description available & (gnl|cdd|87570 : 328.0) no description available & (reliability: 902.0) & (original description: Putative hymA, Description = Calcium-binding protein 39, PFAM = PF08569)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf05108_456419-461317' '(at4g12710 : 338.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G03440.1); Has 4315 Blast hits to 2886 proteins in 265 species: Archae - 2; Bacteria - 8; Metazoa - 965; Fungi - 769; Plants - 2142; Viruses - 0; Other Eukaryotes - 429 (source: NCBI BLink). & (reliability: 676.0) & (original description: Putative POPTR_0014s16800g, Description = Armadillo/beta-catenin repeat family protein, PFAM = PF00514)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf05290_255627-265117' '(at5g19330 : 979.0) Encodes an armadillo repeat protein involved in the abscisic acid response. The protein interacts with a transcription factor, ABF2, which controls ABA-dependent gene expression via the G-box-type ABA-responsive elements.; ARM repeat protein interacting with ABF2 (ARIA); FUNCTIONS IN: protein binding; INVOLVED IN: response to salt stress, negative regulation of seed germination, response to abscisic acid stimulus; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Armadillo-like helical (InterPro:IPR011989), BTB/POZ fold (InterPro:IPR011333), Armadillo (InterPro:IPR000225), BTB/POZ-like (InterPro:IPR000210), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARMADILLO BTB protein 1 (TAIR:AT5G13060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39425 : 108.0) no description available & (gnl|cdd|84929 : 97.7) no description available & (reliability: 1958.0) & (original description: Putative ARIA, Description = ARM REPEAT PROTEIN INTERACTING WITH ABF2, PFAM = PF00651;PF00514;PF00514;PF00514;PF00514)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf06376_307987-313941' '(at3g03440 : 380.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G12710.1); Has 4476 Blast hits to 2974 proteins in 239 species: Archae - 0; Bacteria - 8; Metazoa - 931; Fungi - 611; Plants - 2534; Viruses - 0; Other Eukaryotes - 392 (source: NCBI BLink). & (q64ha9|spl11_orysa : 83.6) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 760.0) & (original description: Putative At3g03440, Description = ARM repeat superfamily protein, PFAM = PF00514;PF00514)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf06761_65790-75703' '(at4g32050 : 654.0) neurochondrin family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), Neurochondrin (InterPro:IPR008709); Has 174 Blast hits to 168 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 7; Plants - 49; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|69078 : 412.0) no description available & (gnl|cdd|37822 : 371.0) no description available & (reliability: 1308.0) & (original description: Putative F775_18621, Description = Neurochondrin, PFAM = PF05536)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf08723_173465-177441' '(at5g66200 : 909.0) Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues, anthers and ovules.; armadillo repeat only 2 (ARO2); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: armadillo repeat only 1 (TAIR:AT4G34940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1818.0) & (original description: Putative ARO2, Description = Armadillo repeat only 2 protein, PFAM = PF00514)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf16208_160173-165505' '(at3g01400 : 489.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G58680.1); Has 6122 Blast hits to 3580 proteins in 271 species: Archae - 0; Bacteria - 2; Metazoa - 1843; Fungi - 536; Plants - 3048; Viruses - 0; Other Eukaryotes - 693 (source: NCBI BLink). & (q64ha9|spl11_orysa : 186.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (gnl|cdd|39425 : 83.6) no description available & (reliability: 978.0) & (original description: Putative At5g58680, Description = ARM repeat superfamily protein, PFAM = PF00514;PF00514;PF00514)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf16592_16874-20676' '(at3g26600 : 518.0) Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues, anthers and ovules.; armadillo repeat only 4 (ARO4); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: armadillo repeat only 2 (TAIR:AT5G66200.1); Has 868 Blast hits to 710 proteins in 130 species: Archae - 0; Bacteria - 0; Metazoa - 111; Fungi - 191; Plants - 457; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 1036.0) & (original description: Putative ARO4, Description = Armadillo repeat only 4 protein, PFAM = PF00514)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf18096_29926-33733' '(at4g16490 : 499.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G01400.1); Has 4881 Blast hits to 3043 proteins in 255 species: Archae - 2; Bacteria - 6; Metazoa - 869; Fungi - 533; Plants - 2917; Viruses - 0; Other Eukaryotes - 554 (source: NCBI BLink). & (q64ha9|spl11_orysa : 171.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 998.0) & (original description: Putative At4g16490, Description = Armadillo/beta-catenin-like repeat-containing protein, PFAM = PF00514;PF00514)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf18589_102558-112291' '(at5g47540 : 534.0) Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT4G17270.1); Has 570 Blast hits to 568 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 142; Plants - 154; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|36779 : 428.0) no description available & (gnl|cdd|87570 : 365.0) no description available & (reliability: 1068.0) & (original description: Putative hymA, Description = Calcium-binding protein 39, PFAM = PF08569)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf20035_5689-11558' '(at5g37290 : 275.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39845 : 221.0) no description available & (reliability: 550.0) & (original description: Putative armc7, Description = Armadillo repeat-containing protein 7, PFAM = )' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf32862_93686-97089' '(at3g20170 : 406.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein with ARM repeat domain (TAIR:AT2G23140.2); Has 3151 Blast hits to 1598 proteins in 216 species: Archae - 4; Bacteria - 31; Metazoa - 442; Fungi - 499; Plants - 1924; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (gnl|cdd|39425 : 267.0) no description available & (reliability: 812.0) & (original description: Putative At3g20170, Description = Armadillo/beta-catenin-like repeat-containing protein, PFAM = PF00514;PF00514)' T '35.1.3' 'not assigned.no ontology.armadillo/beta-catenin repeat family protein' 'niben101scf39524_1-3674' '(at5g50900 : 556.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G45720.2); Has 3124 Blast hits to 1989 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 424; Fungi - 362; Plants - 2044; Viruses - 0; Other Eukaryotes - 294 (source: NCBI BLink). & (reliability: 1112.0) & (original description: Putative At5g50900, Description = Armadillo/beta-catenin-like repeat-containing protein, PFAM = PF00514)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold1993_3795-5326' '(at2g27610 : 150.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 54594 Blast hits to 14874 proteins in 305 species: Archae - 2; Bacteria - 30; Metazoa - 158; Fungi - 263; Plants - 53396; Viruses - 0; Other Eukaryotes - 745 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative At2g27610, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold2809_4985-9035' '(at4g02750 : 454.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 110.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 908.0) & (original description: Putative glysoja_022223, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold4190_38206-42281' '(at3g62470 : 728.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G62540.1); Has 39079 Blast hits to 12185 proteins in 290 species: Archae - 4; Bacteria - 32; Metazoa - 449; Fungi - 607; Plants - 36694; Viruses - 0; Other Eukaryotes - 1293 (source: NCBI BLink). & (q76c99|rf1_orysa : 127.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1456.0) & (original description: Putative At3g62470, Description = Pentatricopeptide repeat-containing protein At3g62470, mitochondrial, PFAM = PF12854;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold4469_32966-36930' '(at3g48810 : 647.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G64320.1); Has 54952 Blast hits to 14329 proteins in 303 species: Archae - 3; Bacteria - 55; Metazoa - 756; Fungi - 902; Plants - 51480; Viruses - 0; Other Eukaryotes - 1756 (source: NCBI BLink). & (q76c99|rf1_orysa : 261.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1294.0) & (original description: Putative , Description = , PFAM = PF13041;PF13041;PF13041;PF13041;PF13041;PF12854;PF13812;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold5598_11139-17331' '(at2g27790 : 167.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT5G27300.1). & (reliability: 320.0) & (original description: Putative LOC100280490, Description = Nucleic acid binding protein, PFAM = )' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold6203_23041-32023' '(at1g12250 : 303.0) Pentapeptide repeat-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentapeptide repeat (InterPro:IPR001646); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G44920.2); Has 7775 Blast hits to 4220 proteins in 505 species: Archae - 143; Bacteria - 5794; Metazoa - 1; Fungi - 0; Plants - 235; Viruses - 4; Other Eukaryotes - 1598 (source: NCBI BLink). & (reliability: 606.0) & (original description: Putative TL20.3, Description = Thylakoid lumenal protein TL20.3, chloroplastic, PFAM = PF00805;PF00805)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold10414_45696-48487' '(at3g49240 : 604.0) embryo defective 1796 (emb1796); FUNCTIONS IN: ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: glutamine-rich protein 23 (TAIR:AT1G10270.1); Has 36492 Blast hits to 13612 proteins in 345 species: Archae - 36; Bacteria - 141; Metazoa - 341; Fungi - 345; Plants - 34345; Viruses - 0; Other Eukaryotes - 1284 (source: NCBI BLink). & (q76c99|rf1_orysa : 115.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1208.0) & (original description: Putative EMB1796, Description = Pentatricopeptide repeat-containing protein At3g49240, PFAM = PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold11050_25981-31300' '(at1g10270 : 532.0) glutamine-rich protein 23 (GRP23); FUNCTIONS IN: binding; INVOLVED IN: embryo development, cell division; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G49240.1); Has 43483 Blast hits to 18975 proteins in 889 species: Archae - 27; Bacteria - 1738; Metazoa - 7010; Fungi - 2820; Plants - 24944; Viruses - 157; Other Eukaryotes - 6787 (source: NCBI BLink). & (q76c99|rf1_orysa : 105.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1064.0) & (original description: Putative GRP23, Description = Pentatricopeptide repeat-containing protein, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold14937_32992-36871' '(at2g17525 : 679.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G74580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 168.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1358.0) & (original description: Putative At2g17525, Description = Pentatricopeptide repeat-containing protein At2g17525, mitochondrial, PFAM = PF12854;PF12854;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold15489_4979-10098' '(at2g17140 : 931.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G65560.1); Has 62164 Blast hits to 14567 proteins in 313 species: Archae - 6; Bacteria - 60; Metazoa - 703; Fungi - 1051; Plants - 58243; Viruses - 0; Other Eukaryotes - 2101 (source: NCBI BLink). & (q76c99|rf1_orysa : 251.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1862.0) & (original description: Putative At2g17140, Description = Pentatricopeptide repeat-containing protein At2g17140, PFAM = PF01535;PF13041;PF13041;PF13041;PF13041;PF13041;PF12854;PF12854;PF12854;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold16106_4524-8344' '(at1g09680 : 569.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G39710.1); Has 56278 Blast hits to 14858 proteins in 304 species: Archae - 3; Bacteria - 59; Metazoa - 821; Fungi - 925; Plants - 52616; Viruses - 0; Other Eukaryotes - 1854 (source: NCBI BLink). & (q76c99|rf1_orysa : 213.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1138.0) & (original description: Putative At1g09680, Description = Putative pentatricopeptide repeat-containing protein At1g09680, PFAM = PF01535;PF01535;PF13041;PF13041;PF13041;PF12854;PF12854;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold17107_5063-9390' '(at3g53700 : 1041.0) maternal effect embryo arrest 40 (MEE40); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G64320.1); Has 58723 Blast hits to 15213 proteins in 321 species: Archae - 6; Bacteria - 72; Metazoa - 992; Fungi - 1450; Plants - 53933; Viruses - 0; Other Eukaryotes - 2270 (source: NCBI BLink). & (q76c99|rf1_orysa : 287.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2082.0) & (original description: Putative MEE40, Description = Pentatricopeptide repeat-containing protein At3g53700, chloroplastic, PFAM = PF13812;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold18426_5823-9559' '(at3g11460 : 801.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G30700.1); Has 38316 Blast hits to 13864 proteins in 256 species: Archae - 0; Bacteria - 8; Metazoa - 61; Fungi - 80; Plants - 37599; Viruses - 0; Other Eukaryotes - 568 (source: NCBI BLink). & (q76c99|rf1_orysa : 98.6) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1602.0) & (original description: Putative ppr, Description = Pentatricopeptide repeat-containing protein, PFAM = PF13041;PF13041;PF13041;PF14432;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold21287_29241-32364' '(at4g35850 : 259.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G02150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 518.0) & (original description: Putative At4g35850, Description = Pentatricopeptide repeat-containing protein At4g35850, mitochondrial, PFAM = PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold23704_2998-22688' '(at1g10910 : 423.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 2 (TAIR:AT1G74850.1); Has 41177 Blast hits to 13618 proteins in 293 species: Archae - 1; Bacteria - 42; Metazoa - 324; Fungi - 460; Plants - 39061; Viruses - 0; Other Eukaryotes - 1289 (source: NCBI BLink). & (reliability: 846.0) & (original description: Putative At1g10910, Description = Pentatricopeptide repeat-containing protein At1g10910, chloroplastic, PFAM = PF13041;PF13041;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold23704_3497-21784' '(at1g10910 : 593.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 2 (TAIR:AT1G74850.1); Has 41177 Blast hits to 13618 proteins in 293 species: Archae - 1; Bacteria - 42; Metazoa - 324; Fungi - 460; Plants - 39061; Viruses - 0; Other Eukaryotes - 1289 (source: NCBI BLink). & (q76c99|rf1_orysa : 130.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1186.0) & (original description: Putative At1g10910, Description = Pentatricopeptide repeat-containing protein At1g10910, chloroplastic, PFAM = PF17177;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold24049_19770-23944' '(at4g28010 : 537.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: rna processing factor 2 (TAIR:AT1G62670.1); Has 64686 Blast hits to 15009 proteins in 313 species: Archae - 9; Bacteria - 69; Metazoa - 819; Fungi - 1094; Plants - 60516; Viruses - 0; Other Eukaryotes - 2179 (source: NCBI BLink). & (q76c99|rf1_orysa : 282.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1074.0) & (original description: Putative At4g28010, Description = Pentatricopeptide repeat-containing protein At4g28010, PFAM = PF13041;PF13041;PF13041;PF13041;PF13041;PF01535;PF12854;PF12854;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold24781_812-4347' '(at5g18475 : 550.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G53700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q76c99|rf1_orysa : 165.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1100.0) & (original description: Putative At5g18475, Description = Pentatricopeptide repeat-containing protein At5g18475, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold25093_4003-8067' '(at3g26782 : 903.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G33990.1); Has 38241 Blast hits to 13696 proteins in 226 species: Archae - 0; Bacteria - 8; Metazoa - 60; Fungi - 36; Plants - 37696; Viruses - 0; Other Eukaryotes - 441 (source: NCBI BLink). & (q76c99|rf1_orysa : 83.6) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1806.0) & (original description: Putative otp82, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF14432;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold27012_15831-19798' '(at1g09410 : 480.0) pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G56690.1); Has 49310 Blast hits to 14061 proteins in 238 species: Archae - 0; Bacteria - 33; Metazoa - 32; Fungi - 36; Plants - 48709; Viruses - 0; Other Eukaryotes - 500 (source: NCBI BLink). & (q76c99|rf1_orysa : 112.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 960.0) & (original description: Putative MTR_7g074040, Description = Pentatricopeptide (PPR) repeat protein, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold29077_1-10238' '(at1g26460 : 707.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G53700.1); Has 8798 Blast hits to 4372 proteins in 169 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 106; Plants - 8403; Viruses - 0; Other Eukaryotes - 284 (source: NCBI BLink). & (reliability: 1414.0) & (original description: Putative At1g26460, Description = Pentatricopeptide repeat-containing protein At1g26460, mitochondrial, PFAM = PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold32226_5131-9083' '(at1g08070 : 436.0) Encodes a chloroplast RNA editing factor.; ORGANELLE TRANSCRIPT PROCESSING 82 (OTP82); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 45065 Blast hits to 15003 proteins in 296 species: Archae - 0; Bacteria - 12; Metazoa - 221; Fungi - 219; Plants - 43815; Viruses - 0; Other Eukaryotes - 798 (source: NCBI BLink). & (reliability: 872.0) & (original description: Putative glysoja_005101, Description = Pentatricopeptide repeat-containing protein, mitochondrial, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold32576_16776-20866' '(at4g02750 : 343.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 101.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 686.0) & (original description: Putative glysoja_028565, Description = Pentatricopeptide repeat-containing protein, mitochondrial, PFAM = PF13041;PF13041;PF13041;PF12854;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold33508_17219-24580' '(at4g35850 : 452.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G02150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 904.0) & (original description: Putative At4g35850, Description = Pentatricopeptide repeat-containing protein At4g35850, mitochondrial, PFAM = PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold34112_1-17011' '(at4g04790 : 566.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G21880.1); Has 18394 Blast hits to 8942 proteins in 249 species: Archae - 4; Bacteria - 29; Metazoa - 171; Fungi - 191; Plants - 17461; Viruses - 0; Other Eukaryotes - 538 (source: NCBI BLink). & (reliability: 1132.0) & (original description: Putative At4g04790, Description = Pentatricopeptide repeat-containing protein At4g04790, mitochondrial, PFAM = PF01535;PF01535;PF17177)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold37380_16381-20738' '(at5g61990 : 97.8) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G59900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative PGSC0003DMG400013578, Description = , PFAM = PF13812;PF13041;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold37474_12201-20179' '(at5g27270 : 1047.0) EMBRYO DEFECTIVE 976 (EMB976); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: proton gradient regulation 3 (TAIR:AT4G31850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 136.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2094.0) & (original description: Putative EMB976, Description = Protein EMBRYO DEFECTIVE 976, PFAM = PF13041;PF13041;PF17177;PF13812;PF13812;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold38989_14584-19914' '(at3g04760 : 97.4) Pentatricopeptide repeat (PPR-like) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G09900.1); Has 62164 Blast hits to 15231 proteins in 315 species: Archae - 6; Bacteria - 70; Metazoa - 1026; Fungi - 1135; Plants - 57538; Viruses - 0; Other Eukaryotes - 2389 (source: NCBI BLink). & (reliability: 194.8) & (original description: Putative PGSC0003DMG400013578, Description = , PFAM = PF01535;PF13812;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold39933_1-4348' '(at1g02910 : 364.0) Mutants defective in this gene were shown to have a reduced PSII content (overall reduction in the levels of several PSII subunits) and a disrupted grana stack structure. The N-terminal half of the protein contains two tetratricopeptide repeat (TPR) motifs that are arranged tandemly, each consisting of a 34-residue degenerate consensus sequence. The N-terminal sequence is rich in positive and hydroxylated amino acid residues.; LOW PSII ACCUMULATION1 (LPA1); FUNCTIONS IN: binding; INVOLVED IN: photosystem II oxygen evolving complex assembly; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3493 (InterPro:IPR021883), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28740.1); Has 201 Blast hits to 200 proteins in 49 species: Archae - 3; Bacteria - 57; Metazoa - 0; Fungi - 0; Plants - 127; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 728.0) & (original description: Putative LPA1, Description = Protein LOW PSII ACCUMULATION 1, chloroplastic, PFAM = PF11998)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold43147_1-4744' '(at1g51965 : 825.0) Encodes ABA Overly-Sensitive5 (ABO5), a pentatricopeptide repeat protein required for cis-splicing of mitochondrial nad2 intron 3. Involved in response to abscisic acid.; ABA Overly-Sensitive 5 (ABO5); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: proton gradient regulation 3 (TAIR:AT4G31850.1); Has 51797 Blast hits to 15079 proteins in 304 species: Archae - 5; Bacteria - 58; Metazoa - 616; Fungi - 900; Plants - 48174; Viruses - 0; Other Eukaryotes - 2044 (source: NCBI BLink). & (q76c99|rf1_orysa : 201.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1650.0) & (original description: Putative At1g51965, Description = Pentatricopeptide repeat-containing protein At1g51965, mitochondrial, PFAM = PF13812;PF13041;PF13041;PF13041;PF13041;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold44058_455-6081' '(at4g16470 : 406.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G11290.1); Has 33210 Blast hits to 13021 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 30; Fungi - 34; Plants - 32761; Viruses - 0; Other Eukaryotes - 385 (source: NCBI BLink). & (o81263|kith_orysa : 246.0) Thymidine kinase (EC 2.7.1.21) - Oryza sativa (Rice) & (gnl|cdd|38335 : 221.0) no description available & (gnl|cdd|84654 : 147.0) no description available & (reliability: 812.0) & (original description: Putative TK, Description = Thymidine kinase, PFAM = PF13041;PF13041;PF00265)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold46834_6978-15728' '(gnl|cdd|36522 : 310.0) no description available & (at4g22670 : 237.0) HSP70-interacting protein 1 (HIP1); FUNCTIONS IN: binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetraticopeptide domain-containing thioredoxin (TAIR:AT3G17880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 474.0) & (original description: Putative ST13, Description = Hsc70-interacting protein, PFAM = PF13181)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold47483_355-9531' '(at1g62720 : 135.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G62680.1); Has 62070 Blast hits to 15065 proteins in 304 species: Archae - 4; Bacteria - 67; Metazoa - 643; Fungi - 921; Plants - 58400; Viruses - 0; Other Eukaryotes - 2035 (source: NCBI BLink). & (q76c99|rf1_orysa : 106.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 270.0) & (original description: Putative , Description = , PFAM = PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold53730_4553-10533' '(at2g31400 : 982.0) Encodes a a chloroplast-localized pentatricopeptide-repeat protein involved in regulation of nuclear gene expression.; genomes uncoupled 1 (GUN1); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 2 (TAIR:AT1G74850.1); Has 66090 Blast hits to 15992 proteins in 322 species: Archae - 5; Bacteria - 98; Metazoa - 1298; Fungi - 977; Plants - 60012; Viruses - 1; Other Eukaryotes - 3699 (source: NCBI BLink). & (q76c99|rf1_orysa : 194.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1964.0) & (original description: Putative At2g31400, Description = Pentatricopeptide repeat-containing protein At2g31400, chloroplastic, PFAM = PF01535;PF01535;PF17177;PF13812;PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold53730_4737-10026' '(at2g31400 : 762.0) Encodes a a chloroplast-localized pentatricopeptide-repeat protein involved in regulation of nuclear gene expression.; genomes uncoupled 1 (GUN1); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 2 (TAIR:AT1G74850.1); Has 66090 Blast hits to 15992 proteins in 322 species: Archae - 5; Bacteria - 98; Metazoa - 1298; Fungi - 977; Plants - 60012; Viruses - 1; Other Eukaryotes - 3699 (source: NCBI BLink). & (q76c99|rf1_orysa : 192.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1524.0) & (original description: Putative At2g31400, Description = Pentatricopeptide repeat-containing protein At2g31400, chloroplastic, PFAM = PF13812;PF13812;PF01535;PF01535;PF17177)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold63876_2708-10847' '(at5g42310 : 949.0) Pentatricopeptide repeat (PPR-like) superfamily protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G22470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 205.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1898.0) & (original description: Putative At5g42310, Description = Pentatricopeptide repeat-containing protein At5g42310, mitochondrial, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535;PF13812;PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold65228_4394-7551' '(at3g61520 : 194.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G28460.1); Has 51879 Blast hits to 14395 proteins in 309 species: Archae - 5; Bacteria - 71; Metazoa - 859; Fungi - 887; Plants - 48189; Viruses - 0; Other Eukaryotes - 1868 (source: NCBI BLink). & (q76c99|rf1_orysa : 154.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 388.0) & (original description: Putative , Description = , PFAM = PF13041;PF13041;PF12854;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold68202_4237-8971' '(at5g50280 : 788.0) embryo defective 1006 (EMB1006); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 181.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1576.0) & (original description: Putative EMB1006, Description = Pentatricopeptide repeat-containing protein At5g50280, chloroplastic, PFAM = PF13812;PF13812;PF13812;PF13041;PF13041;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold73456_1008-8459' '(at2g27790 : 223.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT5G27300.1). & (reliability: 414.0) & (original description: Putative rbm48, Description = RNA-binding protein 48, PFAM = )' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold78340_1729-3900' '(at4g38150 : 249.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G03560.2); Has 35233 Blast hits to 8000 proteins in 207 species: Archae - 4; Bacteria - 10; Metazoa - 48; Fungi - 167; Plants - 34530; Viruses - 0; Other Eukaryotes - 474 (source: NCBI BLink). & (q76c99|rf1_orysa : 92.4) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 498.0) & (original description: Putative At4g38150, Description = Pentatricopeptide repeat-containing protein At4g38150, PFAM = PF01535;PF01535;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold84848_1-3344' '(at1g08070 : 419.0) Encodes a chloroplast RNA editing factor.; ORGANELLE TRANSCRIPT PROCESSING 82 (OTP82); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 45065 Blast hits to 15003 proteins in 296 species: Archae - 0; Bacteria - 12; Metazoa - 221; Fungi - 219; Plants - 43815; Viruses - 0; Other Eukaryotes - 798 (source: NCBI BLink). & (q76c99|rf1_orysa : 90.1) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 838.0) & (original description: Putative otp82, Description = Organelle transcript processing 82, PFAM = PF01535;PF01535;PF01535;PF12854;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold85558_2903-6034' '(at1g77360 : 391.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G71060.1); Has 41021 Blast hits to 13124 proteins in 297 species: Archae - 2; Bacteria - 34; Metazoa - 347; Fungi - 738; Plants - 38768; Viruses - 0; Other Eukaryotes - 1132 (source: NCBI BLink). & (q76c99|rf1_orysa : 88.6) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 782.0) & (original description: Putative At1g77360, Description = Pentatricopeptide repeat-containing protein At1g77360, mitochondrial, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold92663_1661-5026' '(at1g09220 : 425.0) Pentatricopeptide repeat (PPR) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 21 (TAIR:AT2G20540.1); Has 31696 Blast hits to 12551 proteins in 166 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 19; Plants - 31380; Viruses - 0; Other Eukaryotes - 282 (source: NCBI BLink). & (q76c99|rf1_orysa : 87.8) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 850.0) & (original description: Putative pco083348, Description = Pentatricopeptide repeat-containing protein At1g09220, mitochondrial, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold93451_1-3317' '(at4g01400 : 504.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has 40053 Blast hits to 12380 proteins in 263 species: Archae - 4; Bacteria - 27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses - 0; Other Eukaryotes - 935 (source: NCBI BLink). & (q76c99|rf1_orysa : 108.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1008.0) & (original description: Putative At4g01400, Description = Pentatricopeptide repeat-containing protein At4g01400, mitochondrial, PFAM = PF13041;PF13041;PF01535;PF01535;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold99540_818-4102' '(at3g28660 : 534.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G28640.1); Has 30916 Blast hits to 12747 proteins in 210 species: Archae - 0; Bacteria - 2; Metazoa - 48; Fungi - 39; Plants - 30416; Viruses - 0; Other Eukaryotes - 411 (source: NCBI BLink). & (reliability: 1068.0) & (original description: Putative PCMP-E79, Description = Putative pentatricopeptide repeat-containing protein At3g28640, PFAM = PF12854;PF13041;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold107127_226-3230' '(at1g52640 : 604.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G77360.1); Has 37915 Blast hits to 12240 proteins in 287 species: Archae - 2; Bacteria - 38; Metazoa - 426; Fungi - 561; Plants - 35824; Viruses - 0; Other Eukaryotes - 1064 (source: NCBI BLink). & (q76c99|rf1_orysa : 166.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1208.0) & (original description: Putative At1g52640, Description = Pentatricopeptide repeat-containing protein At1g52640, mitochondrial, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.3scaffold128160_250-1739' '(at4g35850 : 134.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G02150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative At4g35850, Description = Pentatricopeptide repeat-containing protein At4g35850, mitochondrial, PFAM = )' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold9_1073662-1108478' '(at1g10910 : 709.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 2 (TAIR:AT1G74850.1); Has 41177 Blast hits to 13618 proteins in 293 species: Archae - 1; Bacteria - 42; Metazoa - 324; Fungi - 460; Plants - 39061; Viruses - 0; Other Eukaryotes - 1289 (source: NCBI BLink). & (q76c99|rf1_orysa : 132.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1418.0) & (original description: Putative At1g10910, Description = Pentatricopeptide repeat-containing protein At1g10910, chloroplastic, PFAM = PF17177;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold342_305620-309442' '(at1g11290 : 427.0) Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.; CHLORORESPIRATORY REDUCTION22 (CRR22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 48258 Blast hits to 14436 proteins in 289 species: Archae - 1; Bacteria - 2; Metazoa - 166; Fungi - 164; Plants - 47192; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (q76c99|rf1_orysa : 99.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 854.0) & (original description: Putative Sb05g006590, Description = Putative uncharacterized protein Sb05g006590, PFAM = PF13812;PF13041;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold573_353319-356653' '(at1g77405 : 530.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G39710.1); Has 29650 Blast hits to 9898 proteins in 260 species: Archae - 4; Bacteria - 20; Metazoa - 223; Fungi - 306; Plants - 28152; Viruses - 0; Other Eukaryotes - 945 (source: NCBI BLink). & (q76c99|rf1_orysa : 121.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1060.0) & (original description: Putative At1g77405, Description = Pentatricopeptide repeat-containing protein At1g77405, PFAM = PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold779_368675-371452' '(at2g15690 : 377.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G32450.1); Has 33034 Blast hits to 15947 proteins in 677 species: Archae - 2; Bacteria - 822; Metazoa - 2903; Fungi - 1398; Plants - 25666; Viruses - 35; Other Eukaryotes - 2208 (source: NCBI BLink). & (reliability: 754.0) & (original description: Putative Sb03g010835, Description = Putative uncharacterized protein Sb03g010835, PFAM = PF14432;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold873_554353-557585' '(at1g80150 : 486.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: fruit; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G36680.1); Has 20922 Blast hits to 6391 proteins in 198 species: Archae - 3; Bacteria - 20; Metazoa - 73; Fungi - 116; Plants - 20269; Viruses - 0; Other Eukaryotes - 441 (source: NCBI BLink). & (q76c99|rf1_orysa : 94.4) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 972.0) & (original description: Putative At1g80150, Description = Pentatricopeptide repeat-containing protein At1g80150, mitochondrial, PFAM = PF13041;PF13041;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold1158_250389-251926' '(at2g27610 : 151.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 54594 Blast hits to 14874 proteins in 305 species: Archae - 2; Bacteria - 30; Metazoa - 158; Fungi - 263; Plants - 53396; Viruses - 0; Other Eukaryotes - 745 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative OTP81, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold1301_184715-188592' '(at2g17525 : 708.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G74580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 177.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1416.0) & (original description: Putative At2g17525, Description = Pentatricopeptide repeat-containing protein At2g17525, mitochondrial, PFAM = PF01535;PF01535;PF01535;PF12854;PF12854;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold1679_22161-28271' '(at3g04760 : 97.4) Pentatricopeptide repeat (PPR-like) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G09900.1); Has 62164 Blast hits to 15231 proteins in 315 species: Archae - 6; Bacteria - 70; Metazoa - 1026; Fungi - 1135; Plants - 57538; Viruses - 0; Other Eukaryotes - 2389 (source: NCBI BLink). & (reliability: 194.8) & (original description: Putative PGSC0003DMG400013578, Description = , PFAM = PF13812;PF01535;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold1713_396434-408660' '(at5g04810 : 1144.0) pentatricopeptide (PPR) repeat-containing protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Pentatricopeptide repeat (InterPro:IPR002885), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G05670.2); Has 66261 Blast hits to 20285 proteins in 585 species: Archae - 7; Bacteria - 408; Metazoa - 3695; Fungi - 2485; Plants - 56206; Viruses - 140; Other Eukaryotes - 3320 (source: NCBI BLink). & (q76c99|rf1_orysa : 195.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2288.0) & (original description: Putative Sb06g033480, Description = Putative uncharacterized protein Sb06g033480, PFAM = PF13041;PF13041;PF13041;PF13041;PF12854;PF01535;PF01535;PF01535;PF01535;PF01535;PF13812;PF00076)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold1721_119328-123097' '(at5g38730 : 675.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G05670.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 195.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1350.0) & (original description: Putative At5g38730, Description = Pentatricopeptide repeat-containing protein At5g38730, PFAM = PF12854;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold1782_203739-208206' '(at3g16010 : 908.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G06920.1); Has 55395 Blast hits to 14888 proteins in 319 species: Archae - 4; Bacteria - 71; Metazoa - 778; Fungi - 987; Plants - 51638; Viruses - 0; Other Eukaryotes - 1917 (source: NCBI BLink). & (q76c99|rf1_orysa : 214.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1816.0) & (original description: Putative At3g16010, Description = Pentatricopeptide repeat-containing protein At3g16010, PFAM = PF01535;PF01535;PF12854;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold1821_191152-195695' '(at4g20740 : 890.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G06710.1); Has 37034 Blast hits to 11477 proteins in 267 species: Archae - 10; Bacteria - 18; Metazoa - 245; Fungi - 473; Plants - 35231; Viruses - 0; Other Eukaryotes - 1057 (source: NCBI BLink). & (q76c99|rf1_orysa : 148.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1780.0) & (original description: Putative At4g20740, Description = Pentatricopeptide repeat-containing protein At4g20740, PFAM = PF17177;PF12854;PF12854;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold1864_102331-105419' '(at1g80550 : 399.0) Pentatricopeptide repeat (PPR) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G15010.1); Has 29244 Blast hits to 10737 proteins in 246 species: Archae - 4; Bacteria - 10; Metazoa - 174; Fungi - 200; Plants - 28041; Viruses - 0; Other Eukaryotes - 815 (source: NCBI BLink). & (q76c99|rf1_orysa : 92.8) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 798.0) & (original description: Putative At1g80550, Description = Pentatricopeptide repeat-containing protein At1g80550, mitochondrial, PFAM = PF13041;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold1933_321773-326190' '(at4g32430 : 809.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G27610.1); Has 44749 Blast hits to 13591 proteins in 248 species: Archae - 1; Bacteria - 28; Metazoa - 59; Fungi - 99; Plants - 43967; Viruses - 0; Other Eukaryotes - 595 (source: NCBI BLink). & (q76c99|rf1_orysa : 92.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1618.0) & (original description: Putative PCMP-E40, Description = Pentatricopeptide repeat-containing protein At4g32430, mitochondrial, PFAM = PF13041;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold2421_252754-256838' '(at5g27110 : 199.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative At5g27110, Description = Pentatricopeptide repeat-containing protein At5g27110, PFAM = PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold2521_189361-195892' '(at3g29290 : 479.0) embryo defective 2076 (emb2076); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has 34767 Blast hits to 12132 proteins in 265 species: Archae - 2; Bacteria - 30; Metazoa - 249; Fungi - 365; Plants - 32849; Viruses - 0; Other Eukaryotes - 1272 (source: NCBI BLink). & (q76c99|rf1_orysa : 117.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 958.0) & (original description: Putative EMB2076, Description = Pentatricopeptide repeat-containing protein At3g29290, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold2540_155578-160145' '(at3g54980 : 718.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: LATERAL ORGAN JUNCTION (TAIR:AT2G39230.1); Has 66577 Blast hits to 14412 proteins in 313 species: Archae - 5; Bacteria - 80; Metazoa - 1084; Fungi - 1336; Plants - 61678; Viruses - 0; Other Eukaryotes - 2394 (source: NCBI BLink). & (q76c99|rf1_orysa : 259.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1436.0) & (original description: Putative LOJ, Description = Pentatricopeptide repeat-containing protein At2g39230, mitochondrial, PFAM = PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold2559_167820-170965' '(at3g13150 : 242.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G13160.1); Has 101842 Blast hits to 26082 proteins in 1101 species: Archae - 126; Bacteria - 13439; Metazoa - 13887; Fungi - 11474; Plants - 44736; Viruses - 475; Other Eukaryotes - 17705 (source: NCBI BLink). & (q76c99|rf1_orysa : 95.5) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 484.0) & (original description: Putative At3g13150, Description = Pentatricopeptide repeat-containing protein At3g13150, PFAM = PF13812;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold2735_263349-266941' '(at5g66520 : 338.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G06540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 92.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 676.0) & (original description: Putative , Description = , PFAM = PF13041;PF13041;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold2745_124583-137267' '(at5g02830 : 865.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G09900.1); Has 31969 Blast hits to 11487 proteins in 269 species: Archae - 3; Bacteria - 39; Metazoa - 341; Fungi - 298; Plants - 29991; Viruses - 0; Other Eukaryotes - 1297 (source: NCBI BLink). & (q76c99|rf1_orysa : 119.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1730.0) & (original description: Putative At5g02830, Description = Pentatricopeptide repeat-containing protein At5g02830, chloroplastic, PFAM = PF13041;PF13812;PF13812;PF13812;PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold2766_26135-31104' '(at5g62370 : 657.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G65560.1); Has 62242 Blast hits to 13624 proteins in 288 species: Archae - 4; Bacteria - 32; Metazoa - 555; Fungi - 723; Plants - 59384; Viruses - 0; Other Eukaryotes - 1544 (source: NCBI BLink). & (q76c99|rf1_orysa : 212.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1314.0) & (original description: Putative , Description = , PFAM = PF12854;PF12854;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold2766_27531-30933' '(at5g62370 : 248.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G65560.1); Has 62242 Blast hits to 13624 proteins in 288 species: Archae - 4; Bacteria - 32; Metazoa - 555; Fungi - 723; Plants - 59384; Viruses - 0; Other Eukaryotes - 1544 (source: NCBI BLink). & (q76c99|rf1_orysa : 130.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 496.0) & (original description: Putative , Description = , PFAM = PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold2855_1-4064' '(at1g69350 : 598.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1); Has 50942 Blast hits to 14152 proteins in 270 species: Archae - 0; Bacteria - 36; Metazoa - 125; Fungi - 175; Plants - 49809; Viruses - 0; Other Eukaryotes - 797 (source: NCBI BLink). & (q76c99|rf1_orysa : 103.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1196.0) & (original description: Putative At1g69350, Description = Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold2855_67-4451' '(at1g69350 : 736.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1); Has 50942 Blast hits to 14152 proteins in 270 species: Archae - 0; Bacteria - 36; Metazoa - 125; Fungi - 175; Plants - 49809; Viruses - 0; Other Eukaryotes - 797 (source: NCBI BLink). & (q76c99|rf1_orysa : 89.4) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1472.0) & (original description: Putative PCMP-E66, Description = Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold3556_109771-114568' '(at1g26900 : 237.0) Pentatricopeptide repeat (PPR) superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 22 (TAIR:AT3G12770.1); Has 36640 Blast hits to 13575 proteins in 201 species: Archae - 0; Bacteria - 9; Metazoa - 54; Fungi - 45; Plants - 36058; Viruses - 0; Other Eukaryotes - 474 (source: NCBI BLink). & (reliability: 474.0) & (original description: Putative At1g26900, Description = Pentatricopeptide repeat-containing protein, mitochondrial, PFAM = PF01535;PF01535;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold3631_166013-171300' '(at4g13650 : 1127.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G16480.1); Has 61118 Blast hits to 14026 proteins in 284 species: Archae - 2; Bacteria - 18; Metazoa - 154; Fungi - 167; Plants - 59907; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (q76c99|rf1_orysa : 116.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2254.0) & (original description: Putative BnaA04g06710D, Description = BnaA04g06710D protein, PFAM = PF13041;PF13041;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold3746_32141-62227' '(at4g04790 : 609.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G21880.1); Has 18394 Blast hits to 8942 proteins in 249 species: Archae - 4; Bacteria - 29; Metazoa - 171; Fungi - 191; Plants - 17461; Viruses - 0; Other Eukaryotes - 538 (source: NCBI BLink). & (reliability: 1218.0) & (original description: Putative At4g04790, Description = Pentatricopeptide repeat-containing protein At4g04790, mitochondrial, PFAM = PF01535;PF01535;PF17177)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold4391_138410-142023' '(at1g52640 : 608.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G77360.1); Has 37915 Blast hits to 12240 proteins in 287 species: Archae - 2; Bacteria - 38; Metazoa - 426; Fungi - 561; Plants - 35824; Viruses - 0; Other Eukaryotes - 1064 (source: NCBI BLink). & (q76c99|rf1_orysa : 165.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1216.0) & (original description: Putative At1g52640, Description = Pentatricopeptide repeat-containing protein At1g52640, mitochondrial, PFAM = PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold4467_136259-140079' '(at1g09680 : 568.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G39710.1); Has 56278 Blast hits to 14858 proteins in 304 species: Archae - 3; Bacteria - 59; Metazoa - 821; Fungi - 925; Plants - 52616; Viruses - 0; Other Eukaryotes - 1854 (source: NCBI BLink). & (q76c99|rf1_orysa : 213.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1136.0) & (original description: Putative At1g09680, Description = Putative pentatricopeptide repeat-containing protein At1g09680, PFAM = PF12854;PF12854;PF12854;PF13041;PF13041;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold5233_34860-38581' '(at1g73400 : 627.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G62470.1); Has 32572 Blast hits to 10552 proteins in 258 species: Archae - 4; Bacteria - 9; Metazoa - 159; Fungi - 256; Plants - 31316; Viruses - 0; Other Eukaryotes - 828 (source: NCBI BLink). & (q76c99|rf1_orysa : 122.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1254.0) & (original description: Putative At1g73400, Description = Pentatricopeptide repeat-containing protein At1g73400, mitochondrial, PFAM = PF13041;PF13041;PF13041;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold5672_10138-13006' '(at3g13160 : 133.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G55890.1); Has 40331 Blast hits to 13148 proteins in 280 species: Archae - 5; Bacteria - 51; Metazoa - 319; Fungi - 323; Plants - 38622; Viruses - 0; Other Eukaryotes - 1011 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative , Description = , PFAM = PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold5857_38908-44563' '(at1g13630 : 583.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G22470.1). & (q76c99|rf1_orysa : 219.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1166.0) & (original description: Putative At1g13630, Description = Putative pentatricopeptide repeat-containing protein At1g13630, PFAM = PF12854;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold5961_86384-89913' '(at5g47360 : 245.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G12775.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 104.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 490.0) & (original description: Putative At5g47360, Description = Pentatricopeptide repeat-containing protein At5g47360, PFAM = PF13041;PF13041;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold7584_42399-47482' '(at1g73710 : 1119.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G23020.1); Has 67480 Blast hits to 15556 proteins in 325 species: Archae - 2; Bacteria - 89; Metazoa - 1013; Fungi - 877; Plants - 63572; Viruses - 0; Other Eukaryotes - 1927 (source: NCBI BLink). & (q76c99|rf1_orysa : 181.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2238.0) & (original description: Putative At1g73710, Description = Pentatricopeptide repeat-containing protein At1g73710, PFAM = PF13041;PF13041;PF13041;PF13812;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF17177)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold7717_44242-48091' '(at4g21065 : 764.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G33170.1); Has 42394 Blast hits to 14278 proteins in 275 species: Archae - 0; Bacteria - 13; Metazoa - 126; Fungi - 79; Plants - 41597; Viruses - 0; Other Eukaryotes - 579 (source: NCBI BLink). & (q76c99|rf1_orysa : 101.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1528.0) & (original description: Putative otp82, Description = Pentatricopeptide repeat-containing protein, PFAM = PF13041;PF13041;PF13041;PF14432;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold7789_4949-9740' '(at4g01400 : 1037.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has 40053 Blast hits to 12380 proteins in 263 species: Archae - 4; Bacteria - 27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses - 0; Other Eukaryotes - 935 (source: NCBI BLink). & (gnl|cdd|35633 : 678.0) no description available & (gnl|cdd|87493 : 234.0) no description available & (reliability: 2074.0) & (original description: Putative COG4, Description = Conserved oligomeric Golgi complex subunit 4, PFAM = PF04437;PF08318)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold8644_19282-37262' '(at4g34830 : 915.0) Encodes MRL1, a conserved pentatricopeptide repeat protein, required for stabilization of rbcL mRNA.; MATURATION OF RBCL 1 (MRL1); INVOLVED IN: mRNA stabilization; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: genomes uncoupled 1 (TAIR:AT2G31400.1); Has 45662 Blast hits to 13867 proteins in 283 species: Archae - 3; Bacteria - 43; Metazoa - 608; Fungi - 635; Plants - 42548; Viruses - 0; Other Eukaryotes - 1825 (source: NCBI BLink). & (q76c99|rf1_orysa : 144.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1830.0) & (original description: Putative MRL1, Description = Pentatricopeptide repeat-containing protein, chloroplastic, PFAM = PF13812;PF01535;PF13041;PF17177)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'nbv0.5scaffold9149_5883-10252' '(at2g39620 : 476.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G09040.1); Has 57584 Blast hits to 13450 proteins in 210 species: Archae - 0; Bacteria - 3; Metazoa - 36; Fungi - 107; Plants - 56697; Viruses - 0; Other Eukaryotes - 741 (source: NCBI BLink). & (q76c99|rf1_orysa : 83.6) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 952.0) & (original description: Putative glysoja_016168, Description = Pentatricopeptide repeat-containing protein, PFAM = PF13041;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00000911ctg005_1854-5347' '(at1g02420 : 596.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G61360.1); Has 33079 Blast hits to 11325 proteins in 263 species: Archae - 4; Bacteria - 36; Metazoa - 353; Fungi - 350; Plants - 31222; Viruses - 0; Other Eukaryotes - 1114 (source: NCBI BLink). & (q76c99|rf1_orysa : 137.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1192.0) & (original description: Putative At1g02420, Description = Putative pentatricopeptide repeat-containing protein At1g02420, PFAM = PF13812;PF13041;PF13041;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00001896ctg017_1-3066' '(at3g42630 : 395.0) Pentatricopeptide repeat (PPR) superfamily protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G14190.1); Has 5690 Blast hits to 3414 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 5631; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (reliability: 790.0) & (original description: Putative At3g42630, Description = Pentatricopeptide repeat-containing protein At3g42630, PFAM = PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00002458ctg008_2400-5915' '(at3g49140 : 167.0) Pentatricopeptide repeat (PPR) superfamily protein; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G24060.2); Has 70134 Blast hits to 25407 proteins in 885 species: Archae - 91; Bacteria - 11736; Metazoa - 6625; Fungi - 3698; Plants - 39243; Viruses - 481; Other Eukaryotes - 8260 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative At3g49140, Description = Pentatricopeptide repeat superfamily protein, putative isoform 1, PFAM = )' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00002710ctg009_4431-7864' '(at1g77360 : 657.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G71060.1); Has 41021 Blast hits to 13124 proteins in 297 species: Archae - 2; Bacteria - 34; Metazoa - 347; Fungi - 738; Plants - 38768; Viruses - 0; Other Eukaryotes - 1132 (source: NCBI BLink). & (q76c99|rf1_orysa : 144.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1314.0) & (original description: Putative At1g77360, Description = Pentatricopeptide repeat-containing protein At1g77360, mitochondrial, PFAM = PF12854;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00003056ctg030_6459-10894' '(at1g11290 : 1088.0) Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.; CHLORORESPIRATORY REDUCTION22 (CRR22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 48258 Blast hits to 14436 proteins in 289 species: Archae - 1; Bacteria - 2; Metazoa - 166; Fungi - 164; Plants - 47192; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (q76c99|rf1_orysa : 105.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2176.0) & (original description: Putative CRR22, Description = Pentatricopeptide repeat-containing protein, PFAM = PF14432;PF13041;PF13041;PF13041;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00003378ctg008_3791-7019' '(at3g25210 : 454.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G27800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 100.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 908.0) & (original description: Putative At3g25210, Description = Pentatricopeptide repeat-containing protein At3g25210, mitochondrial, PFAM = PF13812;PF01535;PF13041;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00003756ctg005_101-7511' '(at2g27790 : 181.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT5G27300.1). & (reliability: 342.0) & (original description: Putative At2g27790, Description = RNA recognition motif-containing protein, PFAM = )' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00004372ctg023_673-5974' '(at1g10270 : 531.0) glutamine-rich protein 23 (GRP23); FUNCTIONS IN: binding; INVOLVED IN: embryo development, cell division; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G49240.1); Has 43483 Blast hits to 18975 proteins in 889 species: Archae - 27; Bacteria - 1738; Metazoa - 7010; Fungi - 2820; Plants - 24944; Viruses - 157; Other Eukaryotes - 6787 (source: NCBI BLink). & (q76c99|rf1_orysa : 107.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1062.0) & (original description: Putative GRP23, Description = Glutamine-rich protein 23, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00005428ctg015_2878-9886' '(at3g49140 : 344.0) Pentatricopeptide repeat (PPR) superfamily protein; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G24060.2); Has 70134 Blast hits to 25407 proteins in 885 species: Archae - 91; Bacteria - 11736; Metazoa - 6625; Fungi - 3698; Plants - 39243; Viruses - 481; Other Eukaryotes - 8260 (source: NCBI BLink). & (reliability: 688.0) & (original description: Putative At3g49140, Description = Uncharacterized protein At3g49140, PFAM = )' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00006301ctg002_471-4729' '(at1g62260 : 736.0) Encodes MITOCHONDRIAL EDITING FACTOR 9 (MEF9), an E subclass PPR protein required for RNA editing.; mitochondrial editing factor 9 (MEF9); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytidine to uridine editing; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G02750.1); Has 48341 Blast hits to 14172 proteins in 260 species: Archae - 3; Bacteria - 22; Metazoa - 134; Fungi - 182; Plants - 47365; Viruses - 0; Other Eukaryotes - 635 (source: NCBI BLink). & (q76c99|rf1_orysa : 128.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1472.0) & (original description: Putative MEF9, Description = Pentatricopeptide (PPR) repeat protein, PFAM = PF12854;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00007055ctg000_1-3689' '(at1g04840 : 698.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G74630.1); Has 39151 Blast hits to 14409 proteins in 285 species: Archae - 0; Bacteria - 8; Metazoa - 167; Fungi - 139; Plants - 38292; Viruses - 0; Other Eukaryotes - 545 (source: NCBI BLink). & (q76c99|rf1_orysa : 108.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1396.0) & (original description: Putative PCMP-H64, Description = Pentatricopeptide repeat-containing protein At1g04840, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00007494ctg000_7961-12025' '(at1g09820 : 590.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G39710.1); Has 57260 Blast hits to 15041 proteins in 306 species: Archae - 1; Bacteria - 71; Metazoa - 917; Fungi - 972; Plants - 53378; Viruses - 0; Other Eukaryotes - 1921 (source: NCBI BLink). & (q76c99|rf1_orysa : 227.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1180.0) & (original description: Putative At1g09820, Description = Pentatricopeptide repeat-containing protein At1g09820, PFAM = PF01535;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00007872ctg007_19864-23064' '(at3g25210 : 461.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G27800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 99.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 922.0) & (original description: Putative At3g25210, Description = Pentatricopeptide repeat-containing protein At3g25210, mitochondrial, PFAM = PF13812;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00008309ctg012_4325-8959' '(at3g13770 : 193.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 37890 Blast hits to 13461 proteins in 236 species: Archae - 0; Bacteria - 8; Metazoa - 36; Fungi - 51; Plants - 37361; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink). & (reliability: 386.0) & (original description: Putative At3g13770, Description = BnaA05g25650D protein, PFAM = PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00008419ctg006_13372-16289' '(at5g46100 : 603.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G64320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 209.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1206.0) & (original description: Putative At5g46100, Description = Pentatricopeptide repeat-containing protein At5g46100, PFAM = PF13041;PF13041;PF12854;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00008458ctg013_2885-24673' '(at1g74900 : 581.0) organelle transcript processing defect 43 (OTP43); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G77360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 182.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1162.0) & (original description: Putative OTP43, Description = Pentatricopeptide repeat-containing protein At1g74900, mitochondrial, PFAM = PF01535;PF13041;PF13041;PF12854;PF17177)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00008559ctg012_3375-6939' '(at3g60050 : 635.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G55630.1); Has 44102 Blast hits to 13509 proteins in 285 species: Archae - 3; Bacteria - 33; Metazoa - 397; Fungi - 634; Plants - 41680; Viruses - 0; Other Eukaryotes - 1355 (source: NCBI BLink). & (q76c99|rf1_orysa : 127.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1270.0) & (original description: Putative At3g60050, Description = Pentatricopeptide repeat-containing protein At3g60050, PFAM = PF13041;PF13041;PF01535;PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00008813ctg010_2960-6307' '(at1g80150 : 473.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: fruit; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G36680.1); Has 20922 Blast hits to 6391 proteins in 198 species: Archae - 3; Bacteria - 20; Metazoa - 73; Fungi - 116; Plants - 20269; Viruses - 0; Other Eukaryotes - 441 (source: NCBI BLink). & (q76c99|rf1_orysa : 93.2) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 946.0) & (original description: Putative At1g80150, Description = Pentatricopeptide repeat-containing protein At1g80150, mitochondrial, PFAM = PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00009449ctg000_250-3692' '(at5g46680 : 446.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G09900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 185.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 892.0) & (original description: Putative Os02g0793200, Description = Os02g0793200 protein, PFAM = PF01535;PF13041;PF13041;PF13041;PF13041;PF13041;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00009480ctg011_9933-13598' '(at2g22410 : 325.0) SLOW GROWTH 1 (SLO1); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 42589 Blast hits to 14346 proteins in 282 species: Archae - 0; Bacteria - 11; Metazoa - 210; Fungi - 265; Plants - 41374; Viruses - 0; Other Eukaryotes - 729 (source: NCBI BLink). & (reliability: 650.0) & (original description: Putative glysoja_014095, Description = Pentatricopeptide repeat-containing protein, chloroplastic, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00009480ctg011_10491-13884' '(at2g22410 : 324.0) SLOW GROWTH 1 (SLO1); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 42589 Blast hits to 14346 proteins in 282 species: Archae - 0; Bacteria - 11; Metazoa - 210; Fungi - 265; Plants - 41374; Viruses - 0; Other Eukaryotes - 729 (source: NCBI BLink). & (reliability: 648.0) & (original description: Putative Os01g0176300, Description = Os01g0176300 protein, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00010892ctg008_1-3353' '(at3g02330 : 993.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G39530.1); Has 56701 Blast hits to 14050 proteins in 283 species: Archae - 2; Bacteria - 22; Metazoa - 148; Fungi - 141; Plants - 55528; Viruses - 0; Other Eukaryotes - 860 (source: NCBI BLink). & (q76c99|rf1_orysa : 108.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1986.0) & (original description: Putative Sb08g002505, Description = Putative uncharacterized protein Sb08g002505, PFAM = PF13041;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00011408ctg020_1-2706' '(at5g27270 : 477.0) EMBRYO DEFECTIVE 976 (EMB976); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: proton gradient regulation 3 (TAIR:AT4G31850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 954.0) & (original description: Putative EMB976, Description = Protein EMBRYO DEFECTIVE 976, PFAM = PF13041;PF13041;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00011781ctg002_1165-8598' '(at4g02680 : 1222.0) Encodes a paralog of ETO1, which is a negative regulator of ACS5 (a key enzyme in ethylene biosynthesis pathway). EOL1 also interacts with and inhibits the activity of ACS5.; ETO1-like 1 (EOL1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT3G51770.1); Has 651 Blast hits to 563 proteins in 153 species: Archae - 10; Bacteria - 244; Metazoa - 131; Fungi - 2; Plants - 163; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (reliability: 2444.0) & (original description: Putative EOL1, Description = ETO1-like protein 1, PFAM = PF13374)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00012006ctg038_4173-7936' '(at1g52640 : 218.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G77360.1); Has 37915 Blast hits to 12240 proteins in 287 species: Archae - 2; Bacteria - 38; Metazoa - 426; Fungi - 561; Plants - 35824; Viruses - 0; Other Eukaryotes - 1064 (source: NCBI BLink). & (q76c99|rf1_orysa : 145.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 436.0) & (original description: Putative At2g13420, Description = Pentatricopeptide repeat-containing protein At2g13420, mitochondrial, PFAM = PF13041;PF13041;PF13041;PF01535;PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00012118ctg021_759-3419' '(at2g35130 : 168.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1). & (reliability: 336.0) & (original description: Putative At2g35130, Description = Pentatricopeptide repeat-containing protein At2g35130, PFAM = )' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00013729ctg005_6459-10288' '(at1g11290 : 436.0) Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.; CHLORORESPIRATORY REDUCTION22 (CRR22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 48258 Blast hits to 14436 proteins in 289 species: Archae - 1; Bacteria - 2; Metazoa - 166; Fungi - 164; Plants - 47192; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (q76c99|rf1_orysa : 98.2) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 872.0) & (original description: Putative Sb05g006590, Description = Putative uncharacterized protein Sb05g006590, PFAM = PF13041;PF13041;PF01535;PF01535;PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00013879ctg005_842-5129' '(at5g50280 : 785.0) embryo defective 1006 (EMB1006); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 181.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1570.0) & (original description: Putative EMB1006, Description = Pentatricopeptide repeat-containing protein At5g50280, chloroplastic, PFAM = PF01535;PF13041;PF13041;PF13812;PF13812;PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00013948ctg002_1-5114' '(at4g13650 : 1116.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G16480.1); Has 61118 Blast hits to 14026 proteins in 284 species: Archae - 2; Bacteria - 18; Metazoa - 154; Fungi - 167; Plants - 59907; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (q76c99|rf1_orysa : 116.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2232.0) & (original description: Putative BnaA04g06710D, Description = BnaA04g06710D protein, PFAM = PF14432;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00013970ctg002_1-4171' '(at4g16390 : 954.0) pentatricopeptide (PPR) repeat-containing protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT5G46580.1); Has 17747 Blast hits to 5579 proteins in 105 species: Archae - 0; Bacteria - 25; Metazoa - 20; Fungi - 137; Plants - 17077; Viruses - 0; Other Eukaryotes - 488 (source: NCBI BLink). & (q76c99|rf1_orysa : 137.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1908.0) & (original description: Putative P67, Description = Pentatricopeptide repeat-containing protein At4g16390, chloroplastic, PFAM = PF12854;PF13041;PF13041;PF17177)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00014192ctg002_472-6970' '(at5g50990 : 566.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G62890.1); Has 34988 Blast hits to 13414 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 67; Fungi - 109; Plants - 34373; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink). & (q76c99|rf1_orysa : 81.6) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1132.0) & (original description: Putative LPA66, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF01535;PF14432;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00014510ctg006_3960-8444' '(at1g53600 : 794.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G02750.1); Has 77136 Blast hits to 22764 proteins in 1112 species: Archae - 15; Bacteria - 7068; Metazoa - 10011; Fungi - 1260; Plants - 54670; Viruses - 665; Other Eukaryotes - 3447 (source: NCBI BLink). & (q76c99|rf1_orysa : 106.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1588.0) & (original description: Putative PCMP-E63, Description = Pentatricopeptide repeat-containing protein At1g53600, mitochondrial, PFAM = PF12854;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00015967ctg025_8030-12434' '(at3g29290 : 473.0) embryo defective 2076 (emb2076); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has 34767 Blast hits to 12132 proteins in 265 species: Archae - 2; Bacteria - 30; Metazoa - 249; Fungi - 365; Plants - 32849; Viruses - 0; Other Eukaryotes - 1272 (source: NCBI BLink). & (q76c99|rf1_orysa : 112.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 946.0) & (original description: Putative EMB2076, Description = Pentatricopeptide repeat-containing protein At3g29290, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00016107ctg007_21675-24991' '(at1g12250 : 146.0) Pentapeptide repeat-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentapeptide repeat (InterPro:IPR001646); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G44920.2); Has 7775 Blast hits to 4220 proteins in 505 species: Archae - 143; Bacteria - 5794; Metazoa - 1; Fungi - 0; Plants - 235; Viruses - 4; Other Eukaryotes - 1598 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative CPLD44, Description = Thylakoid lumenal protein, PFAM = PF00805)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00016553ctg014_364-4414' '(at4g18975 : 293.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G21190.1). & (reliability: 586.0) & (original description: Putative At4g18975, Description = Pentatricopeptide repeat-containing protein At4g18975, chloroplastic, PFAM = )' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00017107ctg010_605-4707' '(at3g18020 : 759.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: rna processing factor 2 (TAIR:AT1G62670.1); Has 37088 Blast hits to 10596 proteins in 228 species: Archae - 2; Bacteria - 22; Metazoa - 80; Fungi - 314; Plants - 35806; Viruses - 0; Other Eukaryotes - 864 (source: NCBI BLink). & (q76c99|rf1_orysa : 199.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1518.0) & (original description: Putative At3g18020, Description = Pentatricopeptide repeat-containing protein At3g18020, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00018333ctg015_38492-45595' '(at3g49140 : 326.0) Pentatricopeptide repeat (PPR) superfamily protein; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G24060.2); Has 70134 Blast hits to 25407 proteins in 885 species: Archae - 91; Bacteria - 11736; Metazoa - 6625; Fungi - 3698; Plants - 39243; Viruses - 481; Other Eukaryotes - 8260 (source: NCBI BLink). & (reliability: 652.0) & (original description: Putative PGSC0003DMG401028895, Description = Pentatricopeptide repeat superfamily protein, putative isoform 1, PFAM = )' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00018824ctg016_5105-12755' '(at5g25630 : 591.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: protein kinase family protein (TAIR:AT5G21222.1). & (q76c99|rf1_orysa : 205.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1182.0) & (original description: Putative At5g25630, Description = Pentatricopeptide repeat-containing protein At5g25630, PFAM = PF01535;PF13041;PF13041;PF13041;PF13041;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00019604ctg024_6375-9228' '(at1g05750 : 576.0) Encodes a pentatricopeptide repeat protein required for editing of rpoA and clpP chloroplast transcripts.; pigment defective 247 (PDE247); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 21 (TAIR:AT2G20540.1); Has 41993 Blast hits to 13871 proteins in 254 species: Archae - 1; Bacteria - 18; Metazoa - 75; Fungi - 77; Plants - 41230; Viruses - 0; Other Eukaryotes - 592 (source: NCBI BLink). & (q76c99|rf1_orysa : 95.9) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1152.0) & (original description: Putative PDE247, Description = Pentatricopeptide repeat-containing protein At1g05750, chloroplastic, PFAM = PF13041;PF13041;PF13041;PF12854;PF12854;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00020601ctg000_515-4593' '(at3g15130 : 798.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 42839 Blast hits to 13577 proteins in 243 species: Archae - 0; Bacteria - 0; Metazoa - 52; Fungi - 90; Plants - 42162; Viruses - 0; Other Eukaryotes - 535 (source: NCBI BLink). & (q76c99|rf1_orysa : 96.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1596.0) & (original description: Putative BnaA03g33750D, Description = BnaA03g33750D protein, PFAM = PF14432;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00022596ctg007_8639-10818' '(at5g62370 : 187.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G65560.1); Has 62242 Blast hits to 13624 proteins in 288 species: Archae - 4; Bacteria - 32; Metazoa - 555; Fungi - 723; Plants - 59384; Viruses - 0; Other Eukaryotes - 1544 (source: NCBI BLink). & (q76c99|rf1_orysa : 102.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 374.0) & (original description: Putative , Description = , PFAM = PF13041;PF13041;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00022745ctg007_1703-5619' '(at1g08070 : 415.0) Encodes a chloroplast RNA editing factor.; ORGANELLE TRANSCRIPT PROCESSING 82 (OTP82); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 45065 Blast hits to 15003 proteins in 296 species: Archae - 0; Bacteria - 12; Metazoa - 221; Fungi - 219; Plants - 43815; Viruses - 0; Other Eukaryotes - 798 (source: NCBI BLink). & (q76c99|rf1_orysa : 89.4) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 830.0) & (original description: Putative otp82, Description = Organelle transcript processing 82, PFAM = PF13041;PF01535;PF01535;PF01535;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00023026ctg001_76-4007' '(at5g13770 : 574.0) Pentatricopeptide repeat (PPR-like) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT5G42310.1); Has 28118 Blast hits to 10756 proteins in 260 species: Archae - 2; Bacteria - 14; Metazoa - 159; Fungi - 283; Plants - 26809; Viruses - 0; Other Eukaryotes - 851 (source: NCBI BLink). & (q76c99|rf1_orysa : 113.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1148.0) & (original description: Putative At5g13770, Description = Pentatricopeptide repeat-containing protein At5g13770, chloroplastic, PFAM = PF13041;PF01535;PF01535;PF01535;PF01535;PF01535;PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00024312ctg009_4059-17817' '(at1g10910 : 289.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 2 (TAIR:AT1G74850.1); Has 41177 Blast hits to 13618 proteins in 293 species: Archae - 1; Bacteria - 42; Metazoa - 324; Fungi - 460; Plants - 39061; Viruses - 0; Other Eukaryotes - 1289 (source: NCBI BLink). & (q76c99|rf1_orysa : 82.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 578.0) & (original description: Putative At1g10910, Description = Pentatricopeptide repeat-containing protein At1g10910, chloroplastic, PFAM = PF13812;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00024878ctg003_17639-19810' '(at4g38150 : 249.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G03560.2); Has 35233 Blast hits to 8000 proteins in 207 species: Archae - 4; Bacteria - 10; Metazoa - 48; Fungi - 167; Plants - 34530; Viruses - 0; Other Eukaryotes - 474 (source: NCBI BLink). & (q76c99|rf1_orysa : 92.8) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 498.0) & (original description: Putative At4g38150, Description = Pentatricopeptide repeat-containing protein At4g38150, PFAM = PF01535;PF01535;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00024985ctg005_26623-30929' '(at1g62390 : 790.0) Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein (TAIR:AT2G25290.3); Has 5282 Blast hits to 4636 proteins in 331 species: Archae - 11; Bacteria - 234; Metazoa - 2213; Fungi - 870; Plants - 1167; Viruses - 2; Other Eukaryotes - 785 (source: NCBI BLink). & (gnl|cdd|39354 : 459.0) no description available & (reliability: 1580.0) & (original description: Putative At1g62390, Description = Carboxylate clamp-tetratricopeptide repeat protein, PFAM = PF00564)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00025867ctg001_27452-32969' '(at1g10270 : 530.0) glutamine-rich protein 23 (GRP23); FUNCTIONS IN: binding; INVOLVED IN: embryo development, cell division; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G49240.1); Has 43483 Blast hits to 18975 proteins in 889 species: Archae - 27; Bacteria - 1738; Metazoa - 7010; Fungi - 2820; Plants - 24944; Viruses - 157; Other Eukaryotes - 6787 (source: NCBI BLink). & (q76c99|rf1_orysa : 105.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1060.0) & (original description: Putative PGSC0003DMG400024905, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00026157ctg000_1715-4848' '(at3g13160 : 290.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G55890.1); Has 40331 Blast hits to 13148 proteins in 280 species: Archae - 5; Bacteria - 51; Metazoa - 319; Fungi - 323; Plants - 38622; Viruses - 0; Other Eukaryotes - 1011 (source: NCBI BLink). & (q76c99|rf1_orysa : 110.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 580.0) & (original description: Putative At3g13160, Description = Pentatricopeptide repeat-containing protein At3g13160, mitochondrial, PFAM = PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00027255ctg000_3490-7907' '(at4g32430 : 813.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G27610.1); Has 44749 Blast hits to 13591 proteins in 248 species: Archae - 1; Bacteria - 28; Metazoa - 59; Fungi - 99; Plants - 43967; Viruses - 0; Other Eukaryotes - 595 (source: NCBI BLink). & (q76c99|rf1_orysa : 94.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1626.0) & (original description: Putative PCMP-E40, Description = Pentatricopeptide repeat-containing protein At4g32430, mitochondrial, PFAM = PF13812;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00027406ctg002_1-1704' '(at2g03880 : 189.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G24000.1); Has 41924 Blast hits to 14587 proteins in 276 species: Archae - 3; Bacteria - 26; Metazoa - 84; Fungi - 128; Plants - 40967; Viruses - 0; Other Eukaryotes - 716 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative LPA66, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00028186ctg003_2262-5645' '(at2g06000 : 454.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G09900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q76c99|rf1_orysa : 182.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 908.0) & (original description: Putative At2g06000, Description = Pentatricopeptide repeat-containing protein At2g06000, PFAM = PF13041;PF13041;PF13041;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00028262ctg000_2978-7088' '(at1g18485 : 473.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 47794 Blast hits to 13382 proteins in 245 species: Archae - 0; Bacteria - 5; Metazoa - 44; Fungi - 66; Plants - 47218; Viruses - 0; Other Eukaryotes - 461 (source: NCBI BLink). & (q76c99|rf1_orysa : 88.6) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 946.0) & (original description: Putative glysoja_030612, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00029104ctg022_4630-7215' '(at2g15980 : 391.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G39710.1); Has 28218 Blast hits to 10356 proteins in 245 species: Archae - 1; Bacteria - 15; Metazoa - 229; Fungi - 251; Plants - 27094; Viruses - 0; Other Eukaryotes - 628 (source: NCBI BLink). & (q76c99|rf1_orysa : 111.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 782.0) & (original description: Putative At2g15980, Description = Pentatricopeptide repeat-containing protein At2g15980, PFAM = PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00030583ctg000_1-2849' '(at1g20300 : 717.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G77360.1); Has 44443 Blast hits to 14229 proteins in 312 species: Archae - 5; Bacteria - 69; Metazoa - 601; Fungi - 771; Plants - 41531; Viruses - 0; Other Eukaryotes - 1466 (source: NCBI BLink). & (q76c99|rf1_orysa : 175.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1434.0) & (original description: Putative At1g20300, Description = Pentatricopeptide repeat-containing protein At1g20300, mitochondrial, PFAM = PF13041;PF13041;PF13041;PF13041;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00031500ctg005_1324-6803' '(at5g42310 : 944.0) Pentatricopeptide repeat (PPR-like) superfamily protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G22470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 206.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1888.0) & (original description: Putative At5g42310, Description = Pentatricopeptide repeat-containing protein At5g42310, mitochondrial, PFAM = PF13041;PF13041;PF13041;PF13041;PF13812;PF13812;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00032921ctg003_1624-6799' '(at5g14770 : 682.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G59900.1); Has 76339 Blast hits to 14879 proteins in 308 species: Archae - 3; Bacteria - 87; Metazoa - 1237; Fungi - 1442; Plants - 70832; Viruses - 0; Other Eukaryotes - 2738 (source: NCBI BLink). & (q76c99|rf1_orysa : 281.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1364.0) & (original description: Putative , Description = Pentatricopeptide repeat-containing protein, putative, PFAM = PF01535;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00033094ctg000_888-5719' '(at5g01110 : 288.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G05670.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 280.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 576.0) & (original description: Putative glysoja_007555, Description = Pentatricopeptide repeat-containing protein, PFAM = PF12854;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00033709ctg004_8897-13162' '(at3g53170 : 580.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: glutamine biosynthetic process; LOCATED IN: nucleolus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G48730.1); Has 41000 Blast hits to 13619 proteins in 279 species: Archae - 1; Bacteria - 35; Metazoa - 326; Fungi - 348; Plants - 39122; Viruses - 0; Other Eukaryotes - 1168 (source: NCBI BLink). & (q76c99|rf1_orysa : 117.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1160.0) & (original description: Putative ppr2, Description = PPR2, PFAM = PF13041;PF13041;PF13041;PF13041;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00033749ctg002_3387-9046' '(at4g13650 : 582.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G16480.1); Has 61118 Blast hits to 14026 proteins in 284 species: Archae - 2; Bacteria - 18; Metazoa - 154; Fungi - 167; Plants - 59907; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (q76c99|rf1_orysa : 102.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1164.0) & (original description: Putative PGSC0003DMG402016414, Description = Pentatricopeptide repeat superfamily protein, putative, PFAM = PF01535;PF01535;PF01535;PF14432;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00036155ctg003_7700-16428' '(at5g37570 : 546.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G29230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1092.0) & (original description: Putative PCMP-E37, Description = Putative pentatricopeptide repeat-containing protein At5g37570, PFAM = PF13041;PF13041;PF12854;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00036476ctg008_936-6589' '(at2g27610 : 454.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 54594 Blast hits to 14874 proteins in 305 species: Archae - 2; Bacteria - 30; Metazoa - 158; Fungi - 263; Plants - 53396; Viruses - 0; Other Eukaryotes - 745 (source: NCBI BLink). & (q76c99|rf1_orysa : 107.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 908.0) & (original description: Putative glysoja_018773, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00039295ctg003_3234-6531' '(at4g33170 : 400.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G09950.1); Has 55398 Blast hits to 13784 proteins in 253 species: Archae - 0; Bacteria - 15; Metazoa - 97; Fungi - 52; Plants - 54672; Viruses - 0; Other Eukaryotes - 562 (source: NCBI BLink). & (reliability: 800.0) & (original description: Putative PGSC0003DMG400002556, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF14432;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00039424ctg007_12752-16906' '(at1g17630 : 632.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G20230.1); Has 40851 Blast hits to 13793 proteins in 242 species: Archae - 0; Bacteria - 7; Metazoa - 93; Fungi - 89; Plants - 40145; Viruses - 0; Other Eukaryotes - 517 (source: NCBI BLink). & (q76c99|rf1_orysa : 95.5) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1264.0) & (original description: Putative At1g17630, Description = Putative pentatricopeptide repeat-containing protein At1g17630, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00039753ctg000_3120-8309' '(at5g42310 : 236.0) Pentatricopeptide repeat (PPR-like) superfamily protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G22470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 125.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 472.0) & (original description: Putative glysoja_018168, Description = Pentatricopeptide repeat-containing protein, PFAM = PF13812;PF12854;PF01535;PF01535;PF01535;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00040234ctg000_1-3977' '(at1g71490 : 797.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G22830.2); Has 41551 Blast hits to 13575 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 56; Fungi - 81; Plants - 40794; Viruses - 0; Other Eukaryotes - 620 (source: NCBI BLink). & (q76c99|rf1_orysa : 141.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1594.0) & (original description: Putative PCMP-E67, Description = Pentatricopeptide repeat-containing protein At1g71490, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00043132ctg000_1-3730' '(at4g01570 : 949.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G06920.1); Has 59349 Blast hits to 13105 proteins in 268 species: Archae - 8; Bacteria - 24; Metazoa - 241; Fungi - 448; Plants - 57026; Viruses - 0; Other Eukaryotes - 1602 (source: NCBI BLink). & (q76c99|rf1_orysa : 152.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1898.0) & (original description: Putative At4g01570, Description = Pentatricopeptide repeat-containing protein At4g01570, PFAM = PF01535;PF13812;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00043567ctg001_1-5953' '(at2g32230 : 463.0) RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs.; proteinaceous RNase P 1 (PRORP1); CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: proteinaceous RNase P 3 (TAIR:AT4G21900.1); Has 2190 Blast hits to 1686 proteins in 140 species: Archae - 0; Bacteria - 0; Metazoa - 111; Fungi - 4; Plants - 1945; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (reliability: 926.0) & (original description: Putative PRORP1, Description = Multidrug resistance pump, putative isoform 1, PFAM = PF16953;PF17177;PF17177)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00043961ctg003_1-4878' '(at1g12250 : 172.0) Pentapeptide repeat-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentapeptide repeat (InterPro:IPR001646); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G44920.2); Has 7775 Blast hits to 4220 proteins in 505 species: Archae - 143; Bacteria - 5794; Metazoa - 1; Fungi - 0; Plants - 235; Viruses - 4; Other Eukaryotes - 1598 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative CPLD44, Description = Pentapeptide repeat protein, PFAM = PF00805)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00045688ctg004_300-4606' '(at1g10330 : 424.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G66520.1); Has 31141 Blast hits to 12595 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 63; Fungi - 42; Plants - 30558; Viruses - 0; Other Eukaryotes - 478 (source: NCBI BLink). & (reliability: 848.0) & (original description: Putative PCMP-E71, Description = Putative pentatricopeptide repeat-containing protein At1g10330, PFAM = PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00046916ctg001_4157-8160' '(at1g76280 : 301.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: genomes uncoupled 1 (TAIR:AT2G31400.1). & (reliability: 602.0) & (original description: Putative At1g76280, Description = Pentatricopeptide repeat-containing protein At1g76280, PFAM = PF13041;PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00046916ctg002_1-6753' '(at1g76280 : 452.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: genomes uncoupled 1 (TAIR:AT2G31400.1). & (reliability: 904.0) & (original description: Putative At1g76280, Description = Pentatricopeptide repeat-containing protein At1g76280, PFAM = PF13812;PF13812;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00048777ctg001_732-4435' '(at5g66520 : 338.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G06540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 83.2) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 676.0) & (original description: Putative Os02g0552100, Description = Os02g0552100 protein, PFAM = PF13041;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00052168ctg000_7620-13847' '(gnl|cdd|36522 : 279.0) no description available & (at4g22670 : 243.0) HSP70-interacting protein 1 (HIP1); FUNCTIONS IN: binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetraticopeptide domain-containing thioredoxin (TAIR:AT3G17880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative ST13, Description = Hsc70-interacting protein, PFAM = PF13181)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00052746ctg002_1823-5718' '(at1g28690 : 637.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G14820.1); Has 38334 Blast hits to 13612 proteins in 253 species: Archae - 1; Bacteria - 23; Metazoa - 125; Fungi - 112; Plants - 37440; Viruses - 0; Other Eukaryotes - 633 (source: NCBI BLink). & (q76c99|rf1_orysa : 92.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1274.0) & (original description: Putative PCMP-E34, Description = Pentatricopeptide repeat-containing protein At1g28690, mitochondrial, PFAM = PF13041;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00055645ctg001_759-4612' '(at4g18520 : 632.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G39530.1); Has 48062 Blast hits to 12645 proteins in 202 species: Archae - 0; Bacteria - 8; Metazoa - 107; Fungi - 40; Plants - 47280; Viruses - 0; Other Eukaryotes - 627 (source: NCBI BLink). & (q76c99|rf1_orysa : 89.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1264.0) & (original description: Putative PCMP-A2, Description = Pentatricopeptide repeat-containing protein At4g18520, PFAM = PF01535;PF01535;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00056966ctg003_1494-5984' '(at4g20770 : 746.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G02330.1); Has 56027 Blast hits to 13813 proteins in 239 species: Archae - 0; Bacteria - 4; Metazoa - 154; Fungi - 170; Plants - 55018; Viruses - 0; Other Eukaryotes - 681 (source: NCBI BLink). & (q76c99|rf1_orysa : 136.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1492.0) & (original description: Putative At4g20770, Description = Pentatricopeptide repeat-containing protein At4g20770, PFAM = PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF12854;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00058442ctg000_3735-8302' '(at4g21300 : 814.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G63370.1); Has 56339 Blast hits to 14414 proteins in 284 species: Archae - 1; Bacteria - 9; Metazoa - 94; Fungi - 190; Plants - 55188; Viruses - 0; Other Eukaryotes - 857 (source: NCBI BLink). & (q76c99|rf1_orysa : 103.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1628.0) & (original description: Putative Sb01g006260, Description = Putative uncharacterized protein Sb01g006260, PFAM = PF13041;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00058861ctg000_4223-8567' '(at5g02860 : 1101.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G18940.1); Has 78068 Blast hits to 16233 proteins in 339 species: Archae - 4; Bacteria - 143; Metazoa - 1692; Fungi - 1544; Plants - 71427; Viruses - 0; Other Eukaryotes - 3258 (source: NCBI BLink). & (q76c99|rf1_orysa : 263.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2202.0) & (original description: Putative At5g02860, Description = Pentatricopeptide repeat-containing protein At5g02860, PFAM = PF13812;PF13812;PF13812;PF13812;PF13812;PF13041;PF13041;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben044scf00061591ctg001_1-3117' '(at2g37320 : 471.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G24000.1); Has 40972 Blast hits to 13911 proteins in 248 species: Archae - 0; Bacteria - 4; Metazoa - 85; Fungi - 62; Plants - 40344; Viruses - 0; Other Eukaryotes - 477 (source: NCBI BLink). & (reliability: 942.0) & (original description: Putative crr2, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101ctg15251_1-3377' '(at2g33680 : 792.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT2G13600.1); Has 49646 Blast hits to 13771 proteins in 238 species: Archae - 0; Bacteria - 6; Metazoa - 50; Fungi - 74; Plants - 48928; Viruses - 0; Other Eukaryotes - 588 (source: NCBI BLink). & (q76c99|rf1_orysa : 99.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1584.0) & (original description: Putative TCM_011013, Description = Tetratricopeptide repeat-like superfamily protein, PFAM = PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00022_1040251-1045118' '(at1g62350 : 253.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G46870.1); Has 376 Blast hits to 372 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 374; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative TCM_041743, Description = Pentatricopeptide repeat superfamily protein, PFAM = PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00024_412896-417600' '(at1g74750 : 1138.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G18900.2); Has 54690 Blast hits to 14739 proteins in 296 species: Archae - 3; Bacteria - 64; Metazoa - 559; Fungi - 736; Plants - 51726; Viruses - 0; Other Eukaryotes - 1602 (source: NCBI BLink). & (q76c99|rf1_orysa : 146.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2216.0) & (original description: Putative At1g74750, Description = Pentatricopeptide repeat-containing protein At1g74750, PFAM = PF13041;PF13041;PF13041;PF12854;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00028_373490-378074' '(at4g14820 : 775.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 42785 Blast hits to 14682 proteins in 270 species: Archae - 0; Bacteria - 16; Metazoa - 63; Fungi - 147; Plants - 41807; Viruses - 0; Other Eukaryotes - 752 (source: NCBI BLink). & (q76c99|rf1_orysa : 91.3) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1550.0) & (original description: Putative dl3135c, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00046_461712-472073' '(at4g35850 : 602.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G02150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1204.0) & (original description: Putative At4g35850, Description = Pentatricopeptide repeat-containing protein At4g35850, mitochondrial, PFAM = PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00046_667133-671370' '(at3g46610 : 777.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G14350.1); Has 35826 Blast hits to 11282 proteins in 257 species: Archae - 3; Bacteria - 23; Metazoa - 290; Fungi - 374; Plants - 33823; Viruses - 0; Other Eukaryotes - 1313 (source: NCBI BLink). & (q76c99|rf1_orysa : 129.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1554.0) & (original description: Putative At3g46610, Description = Pentatricopeptide repeat-containing protein At3g46610, PFAM = PF13812;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00058_292338-296347' '(at1g16830 : 379.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G53700.1); Has 39592 Blast hits to 12738 proteins in 255 species: Archae - 3; Bacteria - 24; Metazoa - 191; Fungi - 211; Plants - 38370; Viruses - 0; Other Eukaryotes - 793 (source: NCBI BLink). & (q76c99|rf1_orysa : 157.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 758.0) & (original description: Putative glysoja_033395, Description = Putative pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00059_510268-513845' '(at5g42450 : 533.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT2G13600.1); Has 29992 Blast hits to 12037 proteins in 182 species: Archae - 10; Bacteria - 16; Metazoa - 15; Fungi - 6; Plants - 29705; Viruses - 0; Other Eukaryotes - 240 (source: NCBI BLink). & (q76c99|rf1_orysa : 80.1) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1066.0) & (original description: Putative PCMP-E102, Description = Pentatricopeptide repeat-containing protein At5g42450, mitochondrial, PFAM = PF12854;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00059_511117-513794' '(at5g42450 : 176.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT2G13600.1); Has 29992 Blast hits to 12037 proteins in 182 species: Archae - 10; Bacteria - 16; Metazoa - 15; Fungi - 6; Plants - 29705; Viruses - 0; Other Eukaryotes - 240 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative At5g42450, Description = BnaA01g24230D protein, PFAM = PF12854;PF13812;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00063_643676-647142' '(at5g66520 : 375.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G06540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 97.1) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 750.0) & (original description: Putative clb19, Description = Pentatricopeptide repeat-containing protein At4g38010 family, PFAM = PF12854;PF13041;PF13041;PF13041;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00063_645858-649132' '(at1g74400 : 392.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21065.1); Has 30893 Blast hits to 12576 proteins in 195 species: Archae - 0; Bacteria - 17; Metazoa - 10; Fungi - 48; Plants - 30449; Viruses - 0; Other Eukaryotes - 369 (source: NCBI BLink). & (reliability: 784.0) & (original description: Putative PCMP-E68, Description = Putative pentatricopeptide repeat-containing protein At1g74400, PFAM = PF13041;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00067_33996-39834' '(at1g51965 : 814.0) Encodes ABA Overly-Sensitive5 (ABO5), a pentatricopeptide repeat protein required for cis-splicing of mitochondrial nad2 intron 3. Involved in response to abscisic acid.; ABA Overly-Sensitive 5 (ABO5); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: proton gradient regulation 3 (TAIR:AT4G31850.1); Has 51797 Blast hits to 15079 proteins in 304 species: Archae - 5; Bacteria - 58; Metazoa - 616; Fungi - 900; Plants - 48174; Viruses - 0; Other Eukaryotes - 2044 (source: NCBI BLink). & (q76c99|rf1_orysa : 199.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1628.0) & (original description: Putative At1g51965, Description = Pentatricopeptide repeat-containing protein At1g51965, mitochondrial, PFAM = PF13041;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00068_90167-94776' '(at2g27610 : 1048.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 54594 Blast hits to 14874 proteins in 305 species: Archae - 2; Bacteria - 30; Metazoa - 158; Fungi - 263; Plants - 53396; Viruses - 0; Other Eukaryotes - 745 (source: NCBI BLink). & (q76c99|rf1_orysa : 131.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2096.0) & (original description: Putative PCMP-H60, Description = Pentatricopeptide repeat-containing protein At2g27610, PFAM = PF13041;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00071_479646-484534' '(at3g63370 : 788.0) Encodes a chloroplast RNA editing factor.; ORGANELLE TRANSCRIPT PROCESSING 86 (OTP86); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21300.1); Has 48148 Blast hits to 13528 proteins in 241 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 62; Plants - 47536; Viruses - 0; Other Eukaryotes - 502 (source: NCBI BLink). & (reliability: 1576.0) & (original description: Putative OTP86, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00072_454258-458435' '(at5g01110 : 808.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G05670.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 311.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1616.0) & (original description: Putative At5g01110, Description = Pentatricopeptide repeat-containing protein At5g01110, PFAM = PF13041;PF13041;PF13041;PF13041;PF13041;PF01535;PF12854;PF12854;PF12854;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00073_455812-459531' '(at4g18840 : 499.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G74630.1); Has 40182 Blast hits to 14292 proteins in 243 species: Archae - 8; Bacteria - 21; Metazoa - 44; Fungi - 131; Plants - 39337; Viruses - 0; Other Eukaryotes - 641 (source: NCBI BLink). & (q76c99|rf1_orysa : 92.4) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 998.0) & (original description: Putative PCMP-E101, Description = Pentatricopeptide repeat-containing protein At4g18840, PFAM = PF01535;PF01535;PF01535;PF13812;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00087_654462-674911' '(at5g10690 : 615.0) pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G12775.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1230.0) & (original description: Putative CBSPPR1, Description = Pentatricopeptide repeat-containing protein At5g10690, PFAM = PF00571;PF13812;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00087_1159263-1163625' '(at5g24830 : 518.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G63080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 212.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1036.0) & (original description: Putative At5g24830, Description = Putative glycosyl phosphatidyl inositol transamidase like protein, PFAM = PF01535;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00109_965018-968472' '(at5g56310 : 359.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 21 (TAIR:AT2G20540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 83.6) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 718.0) & (original description: Putative CRR28, Description = Pentatricopeptide repeat-containing family protein, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00128_568320-572359' '(at5g39980 : 1006.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G62930.1); Has 49138 Blast hits to 14545 proteins in 315 species: Archae - 6; Bacteria - 81; Metazoa - 702; Fungi - 707; Plants - 45788; Viruses - 0; Other Eukaryotes - 1854 (source: NCBI BLink). & (q76c99|rf1_orysa : 166.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2012.0) & (original description: Putative At5g39980, Description = Pentatricopeptide repeat-containing protein At5g39980, chloroplastic, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00130_492402-498267' '(at5g11310 : 571.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G49730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 165.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1142.0) & (original description: Putative At5g11310, Description = Pentatricopeptide repeat-containing protein At5g11310, mitochondrial, PFAM = PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00135_149017-163079' '(at4g34830 : 916.0) Encodes MRL1, a conserved pentatricopeptide repeat protein, required for stabilization of rbcL mRNA.; MATURATION OF RBCL 1 (MRL1); INVOLVED IN: mRNA stabilization; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: genomes uncoupled 1 (TAIR:AT2G31400.1); Has 45662 Blast hits to 13867 proteins in 283 species: Archae - 3; Bacteria - 43; Metazoa - 608; Fungi - 635; Plants - 42548; Viruses - 0; Other Eukaryotes - 1825 (source: NCBI BLink). & (q76c99|rf1_orysa : 146.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1832.0) & (original description: Putative MRL1, Description = Pentatricopeptide repeat-containing protein, chloroplastic, PFAM = PF17177;PF01535;PF13041;PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00151_526002-532134' '(at1g02420 : 276.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G61360.1); Has 33079 Blast hits to 11325 proteins in 263 species: Archae - 4; Bacteria - 36; Metazoa - 353; Fungi - 350; Plants - 31222; Viruses - 0; Other Eukaryotes - 1114 (source: NCBI BLink). & (q76c99|rf1_orysa : 100.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 552.0) & (original description: Putative At1g02420, Description = BnaC03g71350D protein, PFAM = PF13041;PF13041;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00160_495665-498879' '(at3g14580 : 430.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has 35779 Blast hits to 10850 proteins in 252 species: Archae - 2; Bacteria - 9; Metazoa - 300; Fungi - 243; Plants - 34331; Viruses - 0; Other Eukaryotes - 894 (source: NCBI BLink). & (q76c99|rf1_orysa : 105.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 860.0) & (original description: Putative At3g14580, Description = Pentatricopeptide repeat-containing protein At3g14580, mitochondrial, PFAM = PF01535;PF13041;PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00176_139785-707485' '(at3g13160 : 271.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G55890.1); Has 40331 Blast hits to 13148 proteins in 280 species: Archae - 5; Bacteria - 51; Metazoa - 319; Fungi - 323; Plants - 38622; Viruses - 0; Other Eukaryotes - 1011 (source: NCBI BLink). & (q76c99|rf1_orysa : 96.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 542.0) & (original description: Putative , Description = , PFAM = PF13041;PF13041;PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00176_140133-142792' '(at3g13150 : 163.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G13160.1); Has 101842 Blast hits to 26082 proteins in 1101 species: Archae - 126; Bacteria - 13439; Metazoa - 13887; Fungi - 11474; Plants - 44736; Viruses - 475; Other Eukaryotes - 17705 (source: NCBI BLink). & (q76c99|rf1_orysa : 92.8) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 326.0) & (original description: Putative , Description = , PFAM = PF13812;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00176_175892-183270' '(at1g61690 : 434.0) phosphoinositide binding; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G20110.1); Has 11870 Blast hits to 9510 proteins in 652 species: Archae - 53; Bacteria - 741; Metazoa - 6145; Fungi - 1417; Plants - 821; Viruses - 12; Other Eukaryotes - 2681 (source: NCBI BLink). & (gnl|cdd|28947 : 95.5) no description available & (reliability: 868.0) & (original description: Putative BnaC01g29800D, Description = BnaC01g29800D protein, PFAM = PF01363)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00176_937095-940849' '(at4g21170 : 293.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G53700.1); Has 7405 Blast hits to 3644 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 6; Plants - 7339; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (q76c99|rf1_orysa : 104.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 586.0) & (original description: Putative PGSC0003DMG400002071, Description = Putative ovule protein, PFAM = PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00180_1090658-1096250' '(at2g27610 : 451.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 54594 Blast hits to 14874 proteins in 305 species: Archae - 2; Bacteria - 30; Metazoa - 158; Fungi - 263; Plants - 53396; Viruses - 0; Other Eukaryotes - 745 (source: NCBI BLink). & (q76c99|rf1_orysa : 99.4) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 902.0) & (original description: Putative glysoja_018773, Description = Pentatricopeptide repeat-containing protein, PFAM = PF14432;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00213_296605-301396' '(at5g18390 : 581.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G65820.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 124.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1162.0) & (original description: Putative At5g18390, Description = Pentatricopeptide repeat-containing protein At5g18390, mitochondrial, PFAM = PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00214_331530-343940' '(at1g11900 : 254.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G06920.1); Has 30383 Blast hits to 10536 proteins in 259 species: Archae - 3; Bacteria - 11; Metazoa - 189; Fungi - 334; Plants - 28802; Viruses - 0; Other Eukaryotes - 1044 (source: NCBI BLink). & (q76c99|rf1_orysa : 92.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 508.0) & (original description: Putative Sb09g023670, Description = Putative uncharacterized protein Sb09g023670, PFAM = PF13041;PF13041;PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00229_219415-230177' '(at1g76280 : 737.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: genomes uncoupled 1 (TAIR:AT2G31400.1). & (reliability: 1474.0) & (original description: Putative At1g76280, Description = Pentatricopeptide repeat-containing protein At1g76280, PFAM = PF01535;PF01535;PF13041;PF13812;PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00245_217680-221706' '(at5g61400 : 507.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G02150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 251.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1014.0) & (original description: Putative At5g61400, Description = Pentatricopeptide repeat-containing protein At5g61400, PFAM = PF13812;PF12854;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00248_256449-261515' '(at3g23020 : 927.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G73710.1); Has 56373 Blast hits to 14756 proteins in 361 species: Archae - 8; Bacteria - 288; Metazoa - 580; Fungi - 796; Plants - 52865; Viruses - 0; Other Eukaryotes - 1836 (source: NCBI BLink). & (q76c99|rf1_orysa : 168.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1854.0) & (original description: Putative At3g23020, Description = Pentatricopeptide repeat-containing protein At3g23020, PFAM = PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00262_135613-138689' '(at3g13160 : 130.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G55890.1); Has 40331 Blast hits to 13148 proteins in 280 species: Archae - 5; Bacteria - 51; Metazoa - 319; Fungi - 323; Plants - 38622; Viruses - 0; Other Eukaryotes - 1011 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative , Description = , PFAM = PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00322_36244-39686' '(at5g47360 : 331.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G12775.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 135.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 662.0) & (original description: Putative At5g47360, Description = Pentatricopeptide repeat-containing protein At5g47360, PFAM = PF13041;PF13041;PF12854;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00332_502075-505526' '(at1g09190 : 565.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: shoot apex, embryo, sperm cell, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 21 (TAIR:AT2G20540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 100.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1130.0) & (original description: Putative MEF21, Description = Pentatricopeptide repeat-containing protein, PFAM = PF13041;PF13041;PF13041;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00348_451239-455311' '(at3g09060 : 729.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G53700.1); Has 58888 Blast hits to 14270 proteins in 310 species: Archae - 10; Bacteria - 38; Metazoa - 658; Fungi - 1156; Plants - 55027; Viruses - 0; Other Eukaryotes - 1999 (source: NCBI BLink). & (q76c99|rf1_orysa : 252.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1458.0) & (original description: Putative At3g09060, Description = Pentatricopeptide repeat-containing protein At3g09060, PFAM = PF12854;PF12854;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00367_1022574-1026971' '(at5g66520 : 351.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G06540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 82.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 702.0) & (original description: Putative Os02g0552100, Description = Os02g0552100 protein, PFAM = PF13041;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00372_178526-182826' '(at5g39710 : 903.0) EMBRYO DEFECTIVE 2745 (EMB2745); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G55840.1); Has 65335 Blast hits to 15466 proteins in 320 species: Archae - 6; Bacteria - 88; Metazoa - 1398; Fungi - 1479; Plants - 59659; Viruses - 0; Other Eukaryotes - 2705 (source: NCBI BLink). & (q76c99|rf1_orysa : 291.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1806.0) & (original description: Putative EMB2745, Description = Pentatricopeptide repeat-containing protein At5g39710, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF13041;PF12854;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00372_399772-403741' '(at2g15630 : 642.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G01110.1); Has 56384 Blast hits to 14280 proteins in 305 species: Archae - 4; Bacteria - 41; Metazoa - 1079; Fungi - 1056; Plants - 52130; Viruses - 0; Other Eukaryotes - 2074 (source: NCBI BLink). & (q76c99|rf1_orysa : 266.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1284.0) & (original description: Putative At2g15630, Description = Pentatricopeptide repeat-containing protein At2g15630, mitochondrial, PFAM = PF01535;PF13041;PF13041;PF13041;PF13041;PF13041;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00390_3489-7429' '(at3g02490 : 546.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G15980.1); Has 7105 Blast hits to 3955 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 4; Plants - 7071; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 1092.0) & (original description: Putative At3g02490, Description = Pentatricopeptide repeat-containing protein At3g02490, mitochondrial, PFAM = PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00428_634511-639159' '(at4g02750 : 1065.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 112.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2130.0) & (original description: Putative DYW10, Description = Pentatricopeptide repeat-containing protein, PFAM = PF12854;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00428_1196267-1200297' '(at4g16835 : 774.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G02750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 104.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1548.0) & (original description: Putative DYW10, Description = Pentatricopeptide repeat-containing protein At4g16835, mitochondrial, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00437_15286-19349' '(at4g16390 : 956.0) pentatricopeptide (PPR) repeat-containing protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT5G46580.1); Has 17747 Blast hits to 5579 proteins in 105 species: Archae - 0; Bacteria - 25; Metazoa - 20; Fungi - 137; Plants - 17077; Viruses - 0; Other Eukaryotes - 488 (source: NCBI BLink). & (q76c99|rf1_orysa : 141.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1912.0) & (original description: Putative P67, Description = Pentatricopeptide repeat-containing protein At4g16390, chloroplastic, PFAM = PF13041;PF17177;PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00494_737145-739990' '(at4g25270 : 616.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G46790.1); Has 37561 Blast hits to 13487 proteins in 239 species: Archae - 0; Bacteria - 6; Metazoa - 116; Fungi - 110; Plants - 36880; Viruses - 0; Other Eukaryotes - 449 (source: NCBI BLink). & (reliability: 1232.0) & (original description: Putative PCMP-E53, Description = Pentatricopeptide repeat-containing protein At4g25270, chloroplastic, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535;PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00497_781218-785737' '(at5g55740 : 923.0) Encodes a member of the E+ subgroup of the PPR protein family, containing the E and E+ motifs following a tandem array of PPR motifs. It also contains an unknown motif consisting of 15 aa, which is highly conserved in some PPR proteins, including CRR4. CRR21 is involved in RNA editing of the site 2 of ndhD (ndhD-2),which encodes a subunit of the NDH complex. The RNA editing changes aa 128 from Ser to Leu. Mutants have impaired NDH complex activity.; chlororespiratory reduction 21 (CRR21); INVOLVED IN: mRNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 121.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1846.0) & (original description: Putative CRR21, Description = Pentatricopeptide repeat-containing protein At5g55740, chloroplastic, PFAM = PF13041;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00530_598245-602443' '(at4g13650 : 364.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G16480.1); Has 61118 Blast hits to 14026 proteins in 284 species: Archae - 2; Bacteria - 18; Metazoa - 154; Fungi - 167; Plants - 59907; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (q76c99|rf1_orysa : 119.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 728.0) & (original description: Putative , Description = , PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00539_636031-639659' '(at1g20300 : 719.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G77360.1); Has 44443 Blast hits to 14229 proteins in 312 species: Archae - 5; Bacteria - 69; Metazoa - 601; Fungi - 771; Plants - 41531; Viruses - 0; Other Eukaryotes - 1466 (source: NCBI BLink). & (q76c99|rf1_orysa : 175.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1438.0) & (original description: Putative At1g20300, Description = Pentatricopeptide repeat-containing protein At1g20300, mitochondrial, PFAM = PF13041;PF13041;PF13041;PF13041;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00571_381299-386588' '(at2g36730 : 301.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21065.1); Has 32545 Blast hits to 13146 proteins in 206 species: Archae - 0; Bacteria - 9; Metazoa - 61; Fungi - 42; Plants - 32037; Viruses - 0; Other Eukaryotes - 396 (source: NCBI BLink). & (q76c99|rf1_orysa : 82.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 602.0) & (original description: Putative Os03g0821700, Description = Os03g0821700 protein, PFAM = PF13041;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00665_113362-116360' '(at1g06270 : 353.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: rna processing factor 2 (TAIR:AT1G62670.1); Has 12812 Blast hits to 4675 proteins in 155 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 63; Plants - 12587; Viruses - 0; Other Eukaryotes - 162 (source: NCBI BLink). & (reliability: 706.0) & (original description: Putative At1g06270, Description = Pentatricopeptide repeat-containing protein At1g06270, PFAM = PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00704_184347-189457' '(at3g09040 : 1123.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 73401 Blast hits to 14698 proteins in 289 species: Archae - 0; Bacteria - 19; Metazoa - 251; Fungi - 280; Plants - 71776; Viruses - 0; Other Eukaryotes - 1075 (source: NCBI BLink). & (q76c99|rf1_orysa : 122.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2246.0) & (original description: Putative PCMP-E88, Description = Pentatricopeptide repeat-containing protein At3g09040, mitochondrial, PFAM = PF13812;PF13041;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00705_32627-36900' '(at1g14470 : 655.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G08070.1); Has 45588 Blast hits to 14013 proteins in 255 species: Archae - 1; Bacteria - 22; Metazoa - 282; Fungi - 244; Plants - 44188; Viruses - 0; Other Eukaryotes - 851 (source: NCBI BLink). & (q76c99|rf1_orysa : 115.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1310.0) & (original description: Putative PCMP-A4, Description = Pentatricopeptide repeat-containing protein At1g14470, PFAM = PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF14432;PF13812;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00735_229160-235656' '(at5g42310 : 357.0) Pentatricopeptide repeat (PPR-like) superfamily protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G22470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 161.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 714.0) & (original description: Putative glysoja_018168, Description = Pentatricopeptide repeat (PPR-like) superfamily protein isoform 1, PFAM = PF13812;PF13041;PF12854;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00735_563988-570038' '(at5g40405 : 483.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G66520.1); Has 34577 Blast hits to 13703 proteins in 254 species: Archae - 0; Bacteria - 3; Metazoa - 86; Fungi - 90; Plants - 33863; Viruses - 0; Other Eukaryotes - 535 (source: NCBI BLink). & (reliability: 946.0) & (original description: Putative otp82, Description = Pentatricopeptide repeat-containing protein, PFAM = PF13041;PF14432;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00751_410445-414610' '(at2g37230 : 876.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G02060.1); Has 41954 Blast hits to 13568 proteins in 300 species: Archae - 4; Bacteria - 36; Metazoa - 406; Fungi - 591; Plants - 39794; Viruses - 0; Other Eukaryotes - 1123 (source: NCBI BLink). & (q76c99|rf1_orysa : 162.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1752.0) & (original description: Putative At2g37230, Description = Pentatricopeptide repeat-containing protein At2g37230, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF17177)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00756_160046-164254' '(at1g11900 : 253.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G06920.1); Has 30383 Blast hits to 10536 proteins in 259 species: Archae - 3; Bacteria - 11; Metazoa - 189; Fungi - 334; Plants - 28802; Viruses - 0; Other Eukaryotes - 1044 (source: NCBI BLink). & (q76c99|rf1_orysa : 89.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 506.0) & (original description: Putative At1g11900, Description = Pentatricopeptide repeat-containing protein At1g11900, PFAM = PF13812;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00765_129368-133230' '(at1g08070 : 448.0) Encodes a chloroplast RNA editing factor.; ORGANELLE TRANSCRIPT PROCESSING 82 (OTP82); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 45065 Blast hits to 15003 proteins in 296 species: Archae - 0; Bacteria - 12; Metazoa - 221; Fungi - 219; Plants - 43815; Viruses - 0; Other Eukaryotes - 798 (source: NCBI BLink). & (q76c99|rf1_orysa : 100.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 896.0) & (original description: Putative At4g38010, Description = Pentatricopeptide repeat (PPR) superfamily protein isoform 3, PFAM = PF13041;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00777_413841-420033' '(at2g27790 : 226.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT5G27300.1). & (reliability: 422.0) & (original description: Putative rbm48, Description = RNA-binding protein 48, PFAM = PF00076)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00799_356942-360455' '(at1g77405 : 565.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G39710.1); Has 29650 Blast hits to 9898 proteins in 260 species: Archae - 4; Bacteria - 20; Metazoa - 223; Fungi - 306; Plants - 28152; Viruses - 0; Other Eukaryotes - 945 (source: NCBI BLink). & (q76c99|rf1_orysa : 124.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1130.0) & (original description: Putative At1g77405, Description = Pentatricopeptide repeat-containing protein At1g77405, PFAM = PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00813_122377-126728' '(at2g22410 : 764.0) SLOW GROWTH 1 (SLO1); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 42589 Blast hits to 14346 proteins in 282 species: Archae - 0; Bacteria - 11; Metazoa - 210; Fungi - 265; Plants - 41374; Viruses - 0; Other Eukaryotes - 729 (source: NCBI BLink). & (q76c99|rf1_orysa : 112.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1528.0) & (original description: Putative PCMP-E28, Description = Pentatricopeptide repeat-containing protein At2g22410, mitochondrial, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00820_325185-329218' '(at4g39952 : 759.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G03580.1); Has 47712 Blast hits to 13890 proteins in 262 species: Archae - 2; Bacteria - 17; Metazoa - 157; Fungi - 156; Plants - 46708; Viruses - 0; Other Eukaryotes - 672 (source: NCBI BLink). & (q76c99|rf1_orysa : 84.3) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1518.0) & (original description: Putative PCMP-E98, Description = Pentatricopeptide repeat-containing protein At4g39952, mitochondrial, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00825_276011-280113' '(at5g46460 : 794.0) Pentatricopeptide repeat (PPR) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G02750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 111.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1588.0) & (original description: Putative TCM_029568, Description = Pentatricopeptide repeat (PPR) superfamily protein, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF14432;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00863_766596-779970' '(at5g16860 : 350.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38092 : 285.0) no description available & (gnl|cdd|32302 : 150.0) no description available & (q76c99|rf1_orysa : 92.8) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 700.0) & (original description: Putative At5g36290, Description = GDT1-like protein 3, PFAM = PF01169;PF01169;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00895_97996-101510' '(at3g15200 : 481.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cytosolic ribosome; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G15010.1); Has 26696 Blast hits to 9471 proteins in 249 species: Archae - 1; Bacteria - 11; Metazoa - 102; Fungi - 194; Plants - 25787; Viruses - 0; Other Eukaryotes - 601 (source: NCBI BLink). & (q76c99|rf1_orysa : 141.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 962.0) & (original description: Putative At3g15200, Description = Putative pentatricopeptide repeat-containing protein At3g15200, PFAM = PF12854;PF13041;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00898_312539-316344' '(at1g59720 : 781.0) Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.; CHLORORESPIRATORY REDUCTION28 (CRR28); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21065.1); Has 31527 Blast hits to 13136 proteins in 216 species: Archae - 0; Bacteria - 0; Metazoa - 40; Fungi - 37; Plants - 31097; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink). & (reliability: 1562.0) & (original description: Putative otp82, Description = Organelle transcript processing 82, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00905_1425044-1428986' '(at1g11710 : 582.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G01110.1); Has 45515 Blast hits to 13277 proteins in 292 species: Archae - 2; Bacteria - 53; Metazoa - 430; Fungi - 426; Plants - 43316; Viruses - 0; Other Eukaryotes - 1288 (source: NCBI BLink). & (q76c99|rf1_orysa : 192.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1164.0) & (original description: Putative At1g11710, Description = Pentatricopeptide repeat-containing protein At1g11710, mitochondrial, PFAM = PF13041;PF13041;PF13041;PF13041;PF12854;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00911_93235-98343' '(at5g65560 : 840.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G77340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 310.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1680.0) & (original description: Putative At5g65560, Description = Pentatricopeptide repeat-containing protein At5g65560, PFAM = PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF12854;PF12854;PF01535;PF01535;PF01535;PF17177)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00912_441361-455222' '(at5g04810 : 1192.0) pentatricopeptide (PPR) repeat-containing protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Pentatricopeptide repeat (InterPro:IPR002885), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G05670.2); Has 66261 Blast hits to 20285 proteins in 585 species: Archae - 7; Bacteria - 408; Metazoa - 3695; Fungi - 2485; Plants - 56206; Viruses - 140; Other Eukaryotes - 3320 (source: NCBI BLink). & (q76c99|rf1_orysa : 216.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2384.0) & (original description: Putative PPR4, Description = Pentatricopeptide repeat-containing protein At5g04810, chloroplastic, PFAM = PF17177;PF01535;PF01535;PF01535;PF13812;PF13041;PF13041;PF13041;PF00076)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00920_493987-498074' '(at2g13600 : 345.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 46660 Blast hits to 13875 proteins in 226 species: Archae - 0; Bacteria - 4; Metazoa - 74; Fungi - 58; Plants - 45878; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (reliability: 690.0) & (original description: Putative , Description = , PFAM = PF01535;PF01535;PF01535;PF12854;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00949_241014-245786' '(at2g15820 : 825.0) Encodes a protein that promotes splicing of type II introns. otp51 mutants fail to splice intron 2 of plastid ycf3 transcripts, a factor required for the assembly of Photosystem I. Therefore, homozygous otp51 mutants have profound photosynthetic defects and can only survive in sucrose-supplemented in vitro cultures under low light conditions. OTP51 may also be involved in splicing several other transcripts and precursor forms of the trnL, trnG, trnI, and trnA transcripts also accumulate in otp51 mutants. Although OTP51 shares some homology with DNA endonucleases, it lacks key catalytic residues suggesting that it does not participate in DNA cleavage.; ORGANELLE TRANSCRIPT PROCESSING 51 (OTP51); FUNCTIONS IN: endonuclease activity; INVOLVED IN: photosystem I assembly, nuclear mRNA cis splicing, via spliceosome, Group II intron splicing; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), LAGLIDADG DNA endonuclease (InterPro:IPR004860); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G61990.1); Has 8373 Blast hits to 4744 proteins in 190 species: Archae - 0; Bacteria - 4; Metazoa - 37; Fungi - 65; Plants - 8172; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|86259 : 112.0) no description available & (reliability: 1650.0) & (original description: Putative OTP51, Description = Pentatricopeptide repeat-containing protein At2g15820, chloroplastic, PFAM = PF03161;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00963_612126-617101' '(at2g21090 : 713.0) Pentatricopeptide repeat (PPR-like) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 41491 Blast hits to 14018 proteins in 251 species: Archae - 0; Bacteria - 11; Metazoa - 98; Fungi - 122; Plants - 40599; Viruses - 0; Other Eukaryotes - 661 (source: NCBI BLink). & (q76c99|rf1_orysa : 123.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1426.0) & (original description: Putative At2g21090, Description = Pentatricopeptide repeat-containing protein At2g21090, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf00987_38031-42247' '(at3g23330 : 880.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 22 (TAIR:AT3G12770.1); Has 38045 Blast hits to 13879 proteins in 261 species: Archae - 0; Bacteria - 10; Metazoa - 50; Fungi - 109; Plants - 37267; Viruses - 0; Other Eukaryotes - 609 (source: NCBI BLink). & (q76c99|rf1_orysa : 95.1) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1760.0) & (original description: Putative PCMP-H32, Description = Putative pentatricopeptide repeat-containing protein At3g23330, PFAM = PF01535;PF01535;PF13041;PF13041;PF13041;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01001_292192-296389' '(at4g28010 : 545.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: rna processing factor 2 (TAIR:AT1G62670.1); Has 64686 Blast hits to 15009 proteins in 313 species: Archae - 9; Bacteria - 69; Metazoa - 819; Fungi - 1094; Plants - 60516; Viruses - 0; Other Eukaryotes - 2179 (source: NCBI BLink). & (q76c99|rf1_orysa : 277.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1090.0) & (original description: Putative At4g28010, Description = Pentatricopeptide repeat-containing protein At4g28010, PFAM = PF12854;PF12854;PF12854;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01061_834476-838017' '(at2g01860 : 466.0) EMBRYO DEFECTIVE 975 (EMB975); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: LATERAL ORGAN JUNCTION (TAIR:AT2G39230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 932.0) & (original description: Putative EMB975, Description = Pentatricopeptide repeat-containing protein At2g01860, PFAM = PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01063_571460-587996' '(at5g27270 : 1038.0) EMBRYO DEFECTIVE 976 (EMB976); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: proton gradient regulation 3 (TAIR:AT4G31850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 159.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2076.0) & (original description: Putative EMB976, Description = Protein EMBRYO DEFECTIVE 976, PFAM = PF01535;PF01535;PF01535;PF17177;PF13812;PF13812;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01073_478595-482245' '(at3g04130 : 565.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G22670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q76c99|rf1_orysa : 145.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1130.0) & (original description: Putative At3g04130, Description = Pentatricopeptide repeat-containing protein At3g04130, mitochondrial, PFAM = PF12854;PF12854;PF13812;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01076_533331-538185' '(at4g01030 : 852.0) pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G20230.1); Has 44944 Blast hits to 14972 proteins in 296 species: Archae - 1; Bacteria - 32; Metazoa - 191; Fungi - 174; Plants - 43677; Viruses - 0; Other Eukaryotes - 869 (source: NCBI BLink). & (q76c99|rf1_orysa : 130.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1704.0) & (original description: Putative BnaA09g00270D, Description = BnaA09g00270D protein, PFAM = PF14432;PF13041;PF13041;PF13041;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01100_14530-19844' '(at5g61990 : 487.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G59900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 226.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 974.0) & (original description: Putative , Description = , PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF12854;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01148_190525-196154' '(at3g02330 : 1051.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G39530.1); Has 56701 Blast hits to 14050 proteins in 283 species: Archae - 2; Bacteria - 22; Metazoa - 148; Fungi - 141; Plants - 55528; Viruses - 0; Other Eukaryotes - 860 (source: NCBI BLink). & (q76c99|rf1_orysa : 117.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2102.0) & (original description: Putative Sb08g002505, Description = Putative uncharacterized protein Sb08g002505, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01167_199307-203448' '(at1g77010 : 713.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT2G13600.1); Has 48292 Blast hits to 13963 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 112; Fungi - 57; Plants - 47549; Viruses - 0; Other Eukaryotes - 574 (source: NCBI BLink). & (q76c99|rf1_orysa : 102.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1426.0) & (original description: Putative At1g77010, Description = Putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01182_177270-181861' '(at5g16860 : 1001.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 119.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2002.0) & (original description: Putative PCMP-H92, Description = Pentatricopeptide repeat-containing protein At5g16860, PFAM = PF01535;PF01535;PF01535;PF14432;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01184_100631-104445' '(at1g31920 : 706.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G66520.1); Has 36071 Blast hits to 13961 proteins in 258 species: Archae - 0; Bacteria - 3; Metazoa - 83; Fungi - 93; Plants - 35305; Viruses - 0; Other Eukaryotes - 587 (source: NCBI BLink). & (q76c99|rf1_orysa : 97.1) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1412.0) & (original description: Putative crr2, Description = Tetratricopeptide repeat-like superfamily protein, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01192_493033-498116' '(at1g73710 : 1120.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G23020.1); Has 67480 Blast hits to 15556 proteins in 325 species: Archae - 2; Bacteria - 89; Metazoa - 1013; Fungi - 877; Plants - 63572; Viruses - 0; Other Eukaryotes - 1927 (source: NCBI BLink). & (q76c99|rf1_orysa : 181.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2240.0) & (original description: Putative At1g73710, Description = Pentatricopeptide repeat-containing protein At1g73710, PFAM = PF13812;PF17177;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01209_81870-87235' '(at4g31850 : 1351.0) encodes a protein containing 27 pentatrico-peptide repeat (PPR) motifs; proton gradient regulation 3 (PGR3); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G06920.1); Has 108367 Blast hits to 15783 proteins in 329 species: Archae - 17; Bacteria - 129; Metazoa - 1401; Fungi - 2165; Plants - 100462; Viruses - 0; Other Eukaryotes - 4193 (source: NCBI BLink). & (q76c99|rf1_orysa : 275.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2702.0) & (original description: Putative PGR3, Description = Pentatricopeptide repeat-containing protein At4g31850, chloroplastic, PFAM = PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF01535;PF01535;PF13812;PF13812;PF12854;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01221_1634231-1638123' '(at3g23330 : 358.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 22 (TAIR:AT3G12770.1); Has 38045 Blast hits to 13879 proteins in 261 species: Archae - 0; Bacteria - 10; Metazoa - 50; Fungi - 109; Plants - 37267; Viruses - 0; Other Eukaryotes - 609 (source: NCBI BLink). & (q76c99|rf1_orysa : 81.3) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 716.0) & (original description: Putative glysoja_000687, Description = Putative pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01232_276519-283745' '(at3g49140 : 277.0) Pentatricopeptide repeat (PPR) superfamily protein; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G24060.2); Has 70134 Blast hits to 25407 proteins in 885 species: Archae - 91; Bacteria - 11736; Metazoa - 6625; Fungi - 3698; Plants - 39243; Viruses - 481; Other Eukaryotes - 8260 (source: NCBI BLink). & (reliability: 554.0) & (original description: Putative Ccrd_011435, Description = FMN-binding split barrel, PFAM = )' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01240_705940-710189' '(at1g08070 : 904.0) Encodes a chloroplast RNA editing factor.; ORGANELLE TRANSCRIPT PROCESSING 82 (OTP82); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 45065 Blast hits to 15003 proteins in 296 species: Archae - 0; Bacteria - 12; Metazoa - 221; Fungi - 219; Plants - 43815; Viruses - 0; Other Eukaryotes - 798 (source: NCBI BLink). & (q76c99|rf1_orysa : 104.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1808.0) & (original description: Putative otp82, Description = Organelle transcript processing 82, PFAM = PF14432;PF13041;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01250_519135-523546' '(at3g16610 : 687.0) pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G11290.1); Has 44074 Blast hits to 13558 proteins in 215 species: Archae - 0; Bacteria - 6; Metazoa - 87; Fungi - 74; Plants - 43358; Viruses - 0; Other Eukaryotes - 549 (source: NCBI BLink). & (q76c99|rf1_orysa : 118.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1374.0) & (original description: Putative PGSC0003DMG400010540, Description = Pentatricopeptide repeat-containing protein, PFAM = PF14432;PF13041;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01289_1007093-1011426' '(at2g16880 : 642.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: rna processing factor 2 (TAIR:AT1G62670.1); Has 61418 Blast hits to 15263 proteins in 321 species: Archae - 6; Bacteria - 91; Metazoa - 1247; Fungi - 1283; Plants - 56613; Viruses - 0; Other Eukaryotes - 2178 (source: NCBI BLink). & (q76c99|rf1_orysa : 268.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1284.0) & (original description: Putative At2g16880, Description = Pentatricopeptide repeat-containing protein At2g16880, PFAM = PF12854;PF12854;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01292_143985-147622' '(at4g25270 : 607.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G46790.1); Has 37561 Blast hits to 13487 proteins in 239 species: Archae - 0; Bacteria - 6; Metazoa - 116; Fungi - 110; Plants - 36880; Viruses - 0; Other Eukaryotes - 449 (source: NCBI BLink). & (reliability: 1214.0) & (original description: Putative PCMP-E53, Description = Pentatricopeptide repeat-containing protein At4g25270, chloroplastic, PFAM = PF13812;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01326_1076703-1080247' '(at3g28660 : 532.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G28640.1); Has 30916 Blast hits to 12747 proteins in 210 species: Archae - 0; Bacteria - 2; Metazoa - 48; Fungi - 39; Plants - 30416; Viruses - 0; Other Eukaryotes - 411 (source: NCBI BLink). & (reliability: 1064.0) & (original description: Putative PCMP-E80, Description = Pentatricopeptide repeat-containing protein At3g28660, PFAM = PF01535;PF01535;PF01535;PF01535;PF13041;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01372_36025-39878' '(at3g49730 : 798.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G65820.1); Has 44976 Blast hits to 14279 proteins in 285 species: Archae - 4; Bacteria - 30; Metazoa - 692; Fungi - 575; Plants - 42339; Viruses - 0; Other Eukaryotes - 1336 (source: NCBI BLink). & (q76c99|rf1_orysa : 143.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1596.0) & (original description: Putative At5g65820, Description = Putative pentatricopeptide repeat-containing protein At5g65820, PFAM = PF01535;PF01535;PF01535;PF12854;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01372_579111-584141' '(at4g13650 : 586.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G16480.1); Has 61118 Blast hits to 14026 proteins in 284 species: Archae - 2; Bacteria - 18; Metazoa - 154; Fungi - 167; Plants - 59907; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (q76c99|rf1_orysa : 105.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1172.0) & (original description: Putative PGSC0003DMG402016414, Description = Pentatricopeptide repeat superfamily protein, putative, PFAM = PF13041;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01375_855712-863462' '(at3g49140 : 349.0) Pentatricopeptide repeat (PPR) superfamily protein; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G24060.2); Has 70134 Blast hits to 25407 proteins in 885 species: Archae - 91; Bacteria - 11736; Metazoa - 6625; Fungi - 3698; Plants - 39243; Viruses - 481; Other Eukaryotes - 8260 (source: NCBI BLink). & (reliability: 698.0) & (original description: Putative At3g49140, Description = Uncharacterized protein At3g49140, PFAM = )' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01395_62778-65810' '(at2g01860 : 441.0) EMBRYO DEFECTIVE 975 (EMB975); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: LATERAL ORGAN JUNCTION (TAIR:AT2G39230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 882.0) & (original description: Putative EMB975, Description = Pentatricopeptide repeat-containing protein At2g01860, PFAM = PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01396_814806-819397' '(at3g54980 : 718.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: LATERAL ORGAN JUNCTION (TAIR:AT2G39230.1); Has 66577 Blast hits to 14412 proteins in 313 species: Archae - 5; Bacteria - 80; Metazoa - 1084; Fungi - 1336; Plants - 61678; Viruses - 0; Other Eukaryotes - 2394 (source: NCBI BLink). & (q76c99|rf1_orysa : 257.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1436.0) & (original description: Putative LOJ, Description = Pentatricopeptide repeat-containing protein At2g39230, mitochondrial, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01418_366570-370353' '(at5g66520 : 493.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G06540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 92.4) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 986.0) & (original description: Putative otp82, Description = Tetratricopeptide repeat-like superfamily protein, PFAM = PF14432;PF13041;PF13041;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01429_121414-126260' '(at5g65560 : 836.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G77340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 319.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1672.0) & (original description: Putative At5g65560, Description = Pentatricopeptide repeat-containing protein At5g65560, PFAM = PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF12854;PF12854;PF12854;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01469_536060-539998' '(at4g36680 : 449.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G18520.1); Has 31603 Blast hits to 11701 proteins in 258 species: Archae - 3; Bacteria - 12; Metazoa - 242; Fungi - 164; Plants - 30323; Viruses - 0; Other Eukaryotes - 859 (source: NCBI BLink). & (q76c99|rf1_orysa : 134.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 898.0) & (original description: Putative At2g18520, Description = Pentatricopeptide repeat-containing protein At2g18520, mitochondrial, PFAM = PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01486_297856-301988' '(at2g17033 : 368.0) pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G48730.1); Has 2363 Blast hits to 1770 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 2346; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 736.0) & (original description: Putative At2g17033, Description = Pentatricopeptide repeat-containing protein At2g17033, PFAM = PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01502_71272-73838' '(at4g37380 : 238.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G66520.1); Has 33786 Blast hits to 13504 proteins in 252 species: Archae - 0; Bacteria - 14; Metazoa - 55; Fungi - 76; Plants - 33202; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink). & (reliability: 476.0) & (original description: Putative otp82, Description = Pentatricopeptide repeat-containing family protein, PFAM = PF14432;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01534_479156-483336' '(at3g49170 : 1006.0) embryo defective 2261 (EMB2261); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 48732 Blast hits to 14187 proteins in 273 species: Archae - 0; Bacteria - 16; Metazoa - 205; Fungi - 147; Plants - 47588; Viruses - 0; Other Eukaryotes - 776 (source: NCBI BLink). & (q76c99|rf1_orysa : 128.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2012.0) & (original description: Putative EMB2261, Description = Pentatricopeptide repeat-containing protein At3g49170, chloroplastic, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF14432;PF13812;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01534_538123-541610' '(at3g60050 : 615.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G55630.1); Has 44102 Blast hits to 13509 proteins in 285 species: Archae - 3; Bacteria - 33; Metazoa - 397; Fungi - 634; Plants - 41680; Viruses - 0; Other Eukaryotes - 1355 (source: NCBI BLink). & (q76c99|rf1_orysa : 127.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1230.0) & (original description: Putative At3g60050, Description = Pentatricopeptide repeat-containing protein At3g60050, PFAM = PF01535;PF13812;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01535_90223-95641' '(at5g55840 : 1082.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G59900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 291.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2164.0) & (original description: Putative At5g55840, Description = Pentatricopeptide repeat-containing protein At5g55840, PFAM = PF12854;PF12854;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01639_355937-362711' '(at4g02680 : 1233.0) Encodes a paralog of ETO1, which is a negative regulator of ACS5 (a key enzyme in ethylene biosynthesis pathway). EOL1 also interacts with and inhibits the activity of ACS5.; ETO1-like 1 (EOL1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT3G51770.1); Has 651 Blast hits to 563 proteins in 153 species: Archae - 10; Bacteria - 244; Metazoa - 131; Fungi - 2; Plants - 163; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (reliability: 2466.0) & (original description: Putative EOL1, Description = ETO1-like protein 1, PFAM = PF13374)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01661_78081-82747' '(at1g18485 : 859.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 47794 Blast hits to 13382 proteins in 245 species: Archae - 0; Bacteria - 5; Metazoa - 44; Fungi - 66; Plants - 47218; Viruses - 0; Other Eukaryotes - 461 (source: NCBI BLink). & (q76c99|rf1_orysa : 86.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1718.0) & (original description: Putative PCMP-H8, Description = Pentatricopeptide repeat-containing protein At1g18485, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01687_338150-365850' '(at2g17525 : 715.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G74580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 189.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1430.0) & (original description: Putative At2g17525, Description = Pentatricopeptide repeat-containing protein At2g17525, mitochondrial, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF12854;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01688_28966-32657' '(at1g31790 : 255.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G24000.1); Has 20232 Blast hits to 7081 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20190; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 510.0) & (original description: Putative PCMP-A1, Description = Pentatricopeptide repeat-containing protein At1g31790, PFAM = PF01535;PF01535;PF01535;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01696_52886-57003' '(at3g62470 : 714.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G62540.1); Has 39079 Blast hits to 12185 proteins in 290 species: Archae - 4; Bacteria - 32; Metazoa - 449; Fungi - 607; Plants - 36694; Viruses - 0; Other Eukaryotes - 1293 (source: NCBI BLink). & (q76c99|rf1_orysa : 131.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1428.0) & (original description: Putative At3g62470, Description = Pentatricopeptide repeat-containing protein At3g62470, mitochondrial, PFAM = PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01697_254579-257273' '(at1g06710 : 115.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G06920.1); Has 67223 Blast hits to 14860 proteins in 308 species: Archae - 6; Bacteria - 56; Metazoa - 772; Fungi - 1057; Plants - 62952; Viruses - 0; Other Eukaryotes - 2380 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative At1g06710, Description = Pentatricopeptide repeat-containing protein At1g06710, mitochondrial, PFAM = )' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01795_1394372-1402925' '(at4g33990 : 1029.0) embryo defective 2758 (EMB2758); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: shoot apex, embryo; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G30700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 110.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2058.0) & (original description: Putative EMB2758, Description = Pentatricopeptide repeat-containing protein At4g33990, PFAM = PF13041;PF13041;PF13041;PF13041;PF14432;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01795_1406673-1410949' '(at1g20230 : 872.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G23330.1); Has 43615 Blast hits to 14351 proteins in 266 species: Archae - 0; Bacteria - 17; Metazoa - 112; Fungi - 108; Plants - 42635; Viruses - 0; Other Eukaryotes - 743 (source: NCBI BLink). & (q76c99|rf1_orysa : 101.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1744.0) & (original description: Putative PGSC0003DMG400028684, Description = Pentatricopeptide repeat-containing protein, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01795_1441711-1446043' '(at3g24000 : 833.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G23330.1); Has 43197 Blast hits to 14383 proteins in 288 species: Archae - 1; Bacteria - 6; Metazoa - 112; Fungi - 144; Plants - 42273; Viruses - 0; Other Eukaryotes - 661 (source: NCBI BLink). & (q76c99|rf1_orysa : 106.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1666.0) & (original description: Putative REME1, Description = Pentatricopeptide (PPR) repeat protein, PFAM = PF13041;PF13041;PF13041;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01795_1652272-1656887' '(at4g19440 : 692.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G55840.1). & (q76c99|rf1_orysa : 313.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1384.0) & (original description: Putative At4g19440, Description = Pentatricopeptide repeat-containing protein At4g19440, chloroplastic, PFAM = PF12854;PF12854;PF12854;PF12854;PF12854;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01841_126329-130763' '(at3g53700 : 1047.0) maternal effect embryo arrest 40 (MEE40); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G64320.1); Has 58723 Blast hits to 15213 proteins in 321 species: Archae - 6; Bacteria - 72; Metazoa - 992; Fungi - 1450; Plants - 53933; Viruses - 0; Other Eukaryotes - 2270 (source: NCBI BLink). & (q76c99|rf1_orysa : 289.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2094.0) & (original description: Putative MEE40, Description = Pentatricopeptide repeat-containing protein At3g53700, chloroplastic, PFAM = PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01866_35363-38775' '(at1g07740 : 493.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT5G16420.1); Has 40211 Blast hits to 12438 proteins in 276 species: Archae - 2; Bacteria - 44; Metazoa - 539; Fungi - 492; Plants - 37971; Viruses - 0; Other Eukaryotes - 1163 (source: NCBI BLink). & (q76c99|rf1_orysa : 154.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 986.0) & (original description: Putative At1g07740, Description = Pentatricopeptide repeat-containing protein At1g07740, mitochondrial, PFAM = PF01535;PF01535;PF13041;PF13041;PF10037)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01872_123300-127395' '(at5g50390 : 775.0) Pentatricopeptide repeat (PPR-like) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G02010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 83.6) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1550.0) & (original description: Putative PCMP-H58, Description = Pentatricopeptide repeat-containing protein At5g50390, chloroplastic, PFAM = PF14432;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01888_779168-784039' '(at1g77405 : 536.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G39710.1); Has 29650 Blast hits to 9898 proteins in 260 species: Archae - 4; Bacteria - 20; Metazoa - 223; Fungi - 306; Plants - 28152; Viruses - 0; Other Eukaryotes - 945 (source: NCBI BLink). & (q76c99|rf1_orysa : 121.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1072.0) & (original description: Putative At1g77405, Description = Pentatricopeptide repeat-containing protein At1g77405, PFAM = PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01942_182288-186432' '(at4g17616 : 560.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G03100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1120.0) & (original description: Putative At4g17616, Description = Pentatricopeptide repeat-containing protein At4g17616, PFAM = PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01954_12514-16636' '(at2g35030 : 138.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 50772 Blast hits to 15060 proteins in 312 species: Archae - 12; Bacteria - 55; Metazoa - 198; Fungi - 231; Plants - 49530; Viruses - 0; Other Eukaryotes - 746 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative , Description = , PFAM = PF13041;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01964_876711-881095' '(at1g08070 : 585.0) Encodes a chloroplast RNA editing factor.; ORGANELLE TRANSCRIPT PROCESSING 82 (OTP82); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 45065 Blast hits to 15003 proteins in 296 species: Archae - 0; Bacteria - 12; Metazoa - 221; Fungi - 219; Plants - 43815; Viruses - 0; Other Eukaryotes - 798 (source: NCBI BLink). & (q76c99|rf1_orysa : 113.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1170.0) & (original description: Putative otp82, Description = Organelle transcript processing 82, PFAM = PF14432;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf01991_14263-17642' '(at5g46680 : 450.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G09900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 186.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 900.0) & (original description: Putative At4g17915, Description = Putative pentatricopeptide repeat-containing protein At4g17915, PFAM = PF12854;PF12854;PF12854;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02026_19059-23879' '(at5g08490 : 904.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21300.1); Has 47451 Blast hits to 12929 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 30; Plants - 46987; Viruses - 0; Other Eukaryotes - 385 (source: NCBI BLink). & (q76c99|rf1_orysa : 85.9) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1808.0) & (original description: Putative Sb06g017520, Description = Putative uncharacterized protein Sb06g017520, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02027_121404-125029' '(at5g61800 : 511.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT4G18840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 88.2) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1022.0) & (original description: Putative PCMP-E8, Description = Pentatricopeptide repeat-containing protein At5g61800, PFAM = PF12854;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02029_22136-26196' '(at1g20230 : 543.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G23330.1); Has 43615 Blast hits to 14351 proteins in 266 species: Archae - 0; Bacteria - 17; Metazoa - 112; Fungi - 108; Plants - 42635; Viruses - 0; Other Eukaryotes - 743 (source: NCBI BLink). & (q76c99|rf1_orysa : 133.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1086.0) & (original description: Putative PGSC0003DMG400037242, Description = Pentatricopeptide (PPR) repeat protein, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02029_23621-26208' '(at1g08070 : 129.0) Encodes a chloroplast RNA editing factor.; ORGANELLE TRANSCRIPT PROCESSING 82 (OTP82); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 45065 Blast hits to 15003 proteins in 296 species: Archae - 0; Bacteria - 12; Metazoa - 221; Fungi - 219; Plants - 43815; Viruses - 0; Other Eukaryotes - 798 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative PGSC0003DMG400037242, Description = Pentatricopeptide (PPR) repeat protein, PFAM = PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02073_413755-417866' '(at1g56690 : 972.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 51447 Blast hits to 14439 proteins in 253 species: Archae - 0; Bacteria - 17; Metazoa - 29; Fungi - 107; Plants - 50657; Viruses - 0; Other Eukaryotes - 637 (source: NCBI BLink). & (q76c99|rf1_orysa : 108.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1944.0) & (original description: Putative DYW10, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02090_745761-749482' '(at1g34160 : 673.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21065.1); Has 36841 Blast hits to 13999 proteins in 256 species: Archae - 0; Bacteria - 8; Metazoa - 78; Fungi - 94; Plants - 36058; Viruses - 0; Other Eukaryotes - 603 (source: NCBI BLink). & (q76c99|rf1_orysa : 106.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1346.0) & (original description: Putative otp82, Description = Pentatricopeptide repeat-containing family protein, PFAM = PF14432;PF01535;PF01535;PF12854;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02133_671054-674961' '(at5g66520 : 525.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G06540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 88.2) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1050.0) & (original description: Putative OTP81, Description = Pentatricopeptide repeat (PPR) superfamily protein, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041;PF12854;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02145_705918-749796' '(at4g04370 : 721.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 51385 Blast hits to 13710 proteins in 213 species: Archae - 0; Bacteria - 0; Metazoa - 41; Fungi - 119; Plants - 50626; Viruses - 0; Other Eukaryotes - 599 (source: NCBI BLink). & (q76c99|rf1_orysa : 115.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1442.0) & (original description: Putative PCMP-E99, Description = Pentatricopeptide repeat-containing protein At4g04370, PFAM = PF01535;PF01535;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02174_111971-116333' '(at4g19890 : 798.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G39710.1). & (q76c99|rf1_orysa : 238.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1596.0) & (original description: Putative At4g19890, Description = Pentatricopeptide repeat-containing protein At4g19890, PFAM = PF12854;PF13041;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02188_258995-263489' '(at5g14080 : 625.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G64320.1); Has 28709 Blast hits to 10499 proteins in 259 species: Archae - 3; Bacteria - 9; Metazoa - 215; Fungi - 279; Plants - 27316; Viruses - 0; Other Eukaryotes - 887 (source: NCBI BLink). & (q76c99|rf1_orysa : 116.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1250.0) & (original description: Putative At5g14080, Description = Pentatricopeptide repeat-containing protein At5g14080, PFAM = PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02210_824706-829186' '(at5g13230 : 904.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G27610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 94.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1808.0) & (original description: Putative PCMP-H89, Description = Putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial, PFAM = PF14432;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02210_1218557-1222988' '(at2g02150 : 754.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G05670.2); Has 63152 Blast hits to 15060 proteins in 311 species: Archae - 5; Bacteria - 73; Metazoa - 914; Fungi - 1071; Plants - 58741; Viruses - 0; Other Eukaryotes - 2348 (source: NCBI BLink). & (q76c99|rf1_orysa : 275.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1508.0) & (original description: Putative At2g02150, Description = Putative pentatricopeptide repeat-containing protein At2g02150, PFAM = PF01535;PF12854;PF12854;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02218_207429-211069' '(at3g21470 : 523.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G29230.1); Has 44286 Blast hits to 14135 proteins in 254 species: Archae - 0; Bacteria - 16; Metazoa - 240; Fungi - 183; Plants - 43075; Viruses - 0; Other Eukaryotes - 772 (source: NCBI BLink). & (q76c99|rf1_orysa : 125.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1046.0) & (original description: Putative PCMP-E29, Description = Pentatricopeptide repeat-containing protein At3g21470, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02227_155425-167639' '(at5g02830 : 863.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G09900.1); Has 31969 Blast hits to 11487 proteins in 269 species: Archae - 3; Bacteria - 39; Metazoa - 341; Fungi - 298; Plants - 29991; Viruses - 0; Other Eukaryotes - 1297 (source: NCBI BLink). & (q76c99|rf1_orysa : 121.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1726.0) & (original description: Putative At5g02830, Description = Pentatricopeptide repeat-containing protein At5g02830, chloroplastic, PFAM = PF13812;PF13812;PF13812;PF13812;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02227_644356-648341' '(at2g37310 : 714.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 41005 Blast hits to 14175 proteins in 268 species: Archae - 2; Bacteria - 17; Metazoa - 83; Fungi - 122; Plants - 40263; Viruses - 0; Other Eukaryotes - 518 (source: NCBI BLink). & (q76c99|rf1_orysa : 95.5) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1428.0) & (original description: Putative PCMP-E49, Description = Pentatricopeptide repeat-containing protein At2g37310, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02227_721873-725330' '(at2g37320 : 459.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G24000.1); Has 40972 Blast hits to 13911 proteins in 248 species: Archae - 0; Bacteria - 4; Metazoa - 85; Fungi - 62; Plants - 40344; Viruses - 0; Other Eukaryotes - 477 (source: NCBI BLink). & (reliability: 918.0) & (original description: Putative PCMP-E50, Description = Pentatricopeptide repeat-containing protein At2g37320, PFAM = PF13041;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02264_37211-41135' '(at3g01580 : 364.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G11290.1); Has 41472 Blast hits to 13221 proteins in 229 species: Archae - 0; Bacteria - 3; Metazoa - 37; Fungi - 79; Plants - 40856; Viruses - 0; Other Eukaryotes - 497 (source: NCBI BLink). & (q76c99|rf1_orysa : 95.5) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 728.0) & (original description: Putative , Description = , PFAM = PF13041;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02318_533191-538018' '(at4g18520 : 634.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G39530.1); Has 48062 Blast hits to 12645 proteins in 202 species: Archae - 0; Bacteria - 8; Metazoa - 107; Fungi - 40; Plants - 47280; Viruses - 0; Other Eukaryotes - 627 (source: NCBI BLink). & (q76c99|rf1_orysa : 97.1) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1268.0) & (original description: Putative PCMP-A2, Description = Pentatricopeptide repeat-containing protein At4g18520, PFAM = PF13041;PF13041;PF13041;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02325_352101-356119' '(at4g02750 : 513.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 117.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1026.0) & (original description: Putative OSJNBa0084A10.18, Description = OSJNBa0084A10.18 protein, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02328_83981-88546' '(at5g48730 : 633.0) Pentatricopeptide repeat (PPR) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G53170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 124.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1266.0) & (original description: Putative ppr2, Description = PPR2, PFAM = PF01535;PF01535;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02359_4148-8970' '(at4g30825 : 1041.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Cdk-activating kinase assembly factor (MAT1) (InterPro:IPR004575); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G06920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 127.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2082.0) & (original description: Putative At4g30825, Description = Pentatricopeptide repeat-containing protein At4g30825, chloroplastic, PFAM = PF13041;PF13041;PF13041;PF13041;PF17177;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02360_311794-315223' '(at3g49240 : 616.0) embryo defective 1796 (emb1796); FUNCTIONS IN: ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: glutamine-rich protein 23 (TAIR:AT1G10270.1); Has 36492 Blast hits to 13612 proteins in 345 species: Archae - 36; Bacteria - 141; Metazoa - 341; Fungi - 345; Plants - 34345; Viruses - 0; Other Eukaryotes - 1284 (source: NCBI BLink). & (q76c99|rf1_orysa : 118.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1232.0) & (original description: Putative EMB1796, Description = Pentatricopeptide repeat-containing protein At3g49240, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02367_654020-657451' '(at2g32230 : 630.0) RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs.; proteinaceous RNase P 1 (PRORP1); CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: proteinaceous RNase P 3 (TAIR:AT4G21900.1); Has 2190 Blast hits to 1686 proteins in 140 species: Archae - 0; Bacteria - 0; Metazoa - 111; Fungi - 4; Plants - 1945; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (reliability: 1260.0) & (original description: Putative PRORP1, Description = Proteinaceous RNase P 1, chloroplastic/mitochondrial, PFAM = PF16953;PF17177)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02418_167532-172218' '(at4g02750 : 432.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 103.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 864.0) & (original description: Putative DYW10, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02428_176690-185781' '(at3g59040 : 730.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q76c99|rf1_orysa : 162.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1460.0) & (original description: Putative At3g59040, Description = Pentatricopeptide repeat-containing protein At3g59040, PFAM = PF01535;PF01535;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02470_162736-197396' '(at1g10910 : 696.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 2 (TAIR:AT1G74850.1); Has 41177 Blast hits to 13618 proteins in 293 species: Archae - 1; Bacteria - 42; Metazoa - 324; Fungi - 460; Plants - 39061; Viruses - 0; Other Eukaryotes - 1289 (source: NCBI BLink). & (q76c99|rf1_orysa : 123.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1392.0) & (original description: Putative At1g10910, Description = Pentatricopeptide repeat-containing protein At1g10910, chloroplastic, PFAM = PF17177;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02470_163521-195468' '(at1g10910 : 610.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 2 (TAIR:AT1G74850.1); Has 41177 Blast hits to 13618 proteins in 293 species: Archae - 1; Bacteria - 42; Metazoa - 324; Fungi - 460; Plants - 39061; Viruses - 0; Other Eukaryotes - 1289 (source: NCBI BLink). & (q76c99|rf1_orysa : 124.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1220.0) & (original description: Putative At1g10910, Description = Pentatricopeptide repeat-containing protein At1g10910, chloroplastic, PFAM = PF13041;PF13041;PF13041;PF17177)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02499_362891-365733' '(at1g04590 : 268.0) BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18975.4); Has 111 Blast hits to 111 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative T1G11.16, Description = EMB2748, PFAM = )' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02510_600060-603495' '(at4g01400 : 544.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has 40053 Blast hits to 12380 proteins in 263 species: Archae - 4; Bacteria - 27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses - 0; Other Eukaryotes - 935 (source: NCBI BLink). & (q76c99|rf1_orysa : 125.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1088.0) & (original description: Putative At4g01400, Description = Pentatricopeptide repeat-containing protein At4g01400, mitochondrial, PFAM = PF13041;PF13041;PF12854;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02548_453856-458690' '(at4g19220 : 717.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G16480.1); Has 48464 Blast hits to 12375 proteins in 167 species: Archae - 0; Bacteria - 4; Metazoa - 37; Fungi - 15; Plants - 47999; Viruses - 0; Other Eukaryotes - 409 (source: NCBI BLink). & (reliability: 1434.0) & (original description: Putative PCMP-E2, Description = Pentatricopeptide repeat-containing protein At4g19220, mitochondrial, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02553_225602-230160' '(at5g08310 : 687.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G64320.1); Has 73334 Blast hits to 15617 proteins in 287 species: Archae - 3; Bacteria - 36; Metazoa - 297; Fungi - 561; Plants - 70696; Viruses - 0; Other Eukaryotes - 1741 (source: NCBI BLink). & (q76c99|rf1_orysa : 213.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1374.0) & (original description: Putative At5g08310, Description = Putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF12854;PF17177)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02553_252688-256298' '(at5g08305 : 595.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G06540.1). & (q76c99|rf1_orysa : 98.6) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1190.0) & (original description: Putative PCMP-E105, Description = Pentatricopeptide repeat-containing protein At5g08305, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02637_41049-43855' '(at2g36730 : 485.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21065.1); Has 32545 Blast hits to 13146 proteins in 206 species: Archae - 0; Bacteria - 9; Metazoa - 61; Fungi - 42; Plants - 32037; Viruses - 0; Other Eukaryotes - 396 (source: NCBI BLink). & (reliability: 970.0) & (original description: Putative PCMP-E44, Description = Pentatricopeptide repeat-containing protein At2g36730, PFAM = PF13041;PF13041;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02637_191804-195927' '(at3g26540 : 762.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21300.1); Has 45842 Blast hits to 12891 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 71; Plants - 45205; Viruses - 0; Other Eukaryotes - 485 (source: NCBI BLink). & (q76c99|rf1_orysa : 81.3) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1524.0) & (original description: Putative PCMP-A5, Description = Pentatricopeptide repeat-containing protein At3g26540, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02637_271511-276778' '(at1g43980 : 530.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 35490 Blast hits to 12305 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 8; Plants - 35171; Viruses - 0; Other Eukaryotes - 303 (source: NCBI BLink). & (reliability: 1060.0) & (original description: Putative PCMP-E58, Description = Pentatricopeptide repeat-containing protein At1g43980, mitochondrial, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02641_13655-17742' '(at4g37170 : 884.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 43848 Blast hits to 14238 proteins in 253 species: Archae - 0; Bacteria - 12; Metazoa - 20; Fungi - 118; Plants - 43065; Viruses - 0; Other Eukaryotes - 633 (source: NCBI BLink). & (q76c99|rf1_orysa : 111.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1768.0) & (original description: Putative otp82, Description = Organelle transcript processing 82, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02668_171785-178302' '(at4g20740 : 904.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G06710.1); Has 37034 Blast hits to 11477 proteins in 267 species: Archae - 10; Bacteria - 18; Metazoa - 245; Fungi - 473; Plants - 35231; Viruses - 0; Other Eukaryotes - 1057 (source: NCBI BLink). & (q76c99|rf1_orysa : 144.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1808.0) & (original description: Putative At4g20740, Description = Pentatricopeptide repeat-containing protein At4g20740, PFAM = PF01535;PF01535;PF01535;PF17177;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02738_306063-341811' '(at3g02490 : 554.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G15980.1); Has 7105 Blast hits to 3955 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 4; Plants - 7071; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 1108.0) & (original description: Putative At3g02490, Description = Pentatricopeptide repeat-containing protein At3g02490, mitochondrial, PFAM = PF01535;PF01535;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02824_261260-264683' '(at1g13630 : 191.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G22470.1). & (q76c99|rf1_orysa : 109.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 382.0) & (original description: Putative At1g13630, Description = Putative pentatricopeptide repeat-containing protein At1g13630, PFAM = PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02824_455892-460120' '(at1g68930 : 971.0) pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 47331 Blast hits to 14466 proteins in 272 species: Archae - 2; Bacteria - 18; Metazoa - 110; Fungi - 135; Plants - 46381; Viruses - 0; Other Eukaryotes - 685 (source: NCBI BLink). & (q76c99|rf1_orysa : 110.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1942.0) & (original description: Putative PCMP-H22, Description = Putative pentatricopeptide repeat-containing protein At1g68930, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02868_92932-96809' '(at5g66520 : 584.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G06540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 115.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1168.0) & (original description: Putative ELI1, Description = Pentatricopeptide repeat-containing protein, PFAM = PF13041;PF13041;PF13041;PF14432;PF12854;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02869_21012-24802' '(at1g03540 : 698.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT2G13600.1); Has 43035 Blast hits to 14042 proteins in 228 species: Archae - 0; Bacteria - 19; Metazoa - 59; Fungi - 97; Plants - 42229; Viruses - 0; Other Eukaryotes - 631 (source: NCBI BLink). & (q76c99|rf1_orysa : 109.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1396.0) & (original description: Putative PCMP-E4, Description = Pentatricopeptide repeat-containing protein At1g03540, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02869_190187-193470' '(at1g03510 : 526.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 21 (TAIR:AT2G20540.1); Has 33405 Blast hits to 13221 proteins in 227 species: Archae - 0; Bacteria - 37; Metazoa - 55; Fungi - 85; Plants - 32781; Viruses - 0; Other Eukaryotes - 447 (source: NCBI BLink). & (reliability: 1052.0) & (original description: Putative PCMP-E3, Description = Putative pentatricopeptide repeat-containing protein At1g03510, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf02909_218223-222103' '(at4g37380 : 764.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G66520.1); Has 33786 Blast hits to 13504 proteins in 252 species: Archae - 0; Bacteria - 14; Metazoa - 55; Fungi - 76; Plants - 33202; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink). & (q76c99|rf1_orysa : 105.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1528.0) & (original description: Putative ELI1, Description = Pentatricopeptide repeat-containing protein ELI1, chloroplastic, PFAM = PF01535;PF01535;PF13041;PF13041;PF13041;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03018_1275002-1280046' '(at3g53170 : 573.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: glutamine biosynthetic process; LOCATED IN: nucleolus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G48730.1); Has 41000 Blast hits to 13619 proteins in 279 species: Archae - 1; Bacteria - 35; Metazoa - 326; Fungi - 348; Plants - 39122; Viruses - 0; Other Eukaryotes - 1168 (source: NCBI BLink). & (q76c99|rf1_orysa : 120.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1146.0) & (original description: Putative ppr2, Description = PPR2, PFAM = PF13041;PF13041;PF13041;PF13041;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03027_177886-188691' '(at1g26460 : 708.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G53700.1); Has 8798 Blast hits to 4372 proteins in 169 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 106; Plants - 8403; Viruses - 0; Other Eukaryotes - 284 (source: NCBI BLink). & (reliability: 1416.0) & (original description: Putative At1g26460, Description = Pentatricopeptide repeat-containing protein At1g26460, mitochondrial, PFAM = PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03030_162489-168307' '(at5g15280 : 865.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G55840.1); Has 34111 Blast hits to 7189 proteins in 218 species: Archae - 2; Bacteria - 9; Metazoa - 117; Fungi - 126; Plants - 33142; Viruses - 0; Other Eukaryotes - 715 (source: NCBI BLink). & (q76c99|rf1_orysa : 127.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1730.0) & (original description: Putative , Description = , PFAM = PF13812;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03038_423988-428583' '(at2g34400 : 663.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G08820.1); Has 41759 Blast hits to 14424 proteins in 280 species: Archae - 0; Bacteria - 19; Metazoa - 208; Fungi - 170; Plants - 40611; Viruses - 0; Other Eukaryotes - 751 (source: NCBI BLink). & (q76c99|rf1_orysa : 108.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1326.0) & (original description: Putative otp82, Description = Organelle transcript processing 82, PFAM = PF01535;PF13041;PF13041;PF13041;PF13812;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03047_178744-192145' '(at1g61690 : 446.0) phosphoinositide binding; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G20110.1); Has 11870 Blast hits to 9510 proteins in 652 species: Archae - 53; Bacteria - 741; Metazoa - 6145; Fungi - 1417; Plants - 821; Viruses - 12; Other Eukaryotes - 2681 (source: NCBI BLink). & (gnl|cdd|28947 : 92.8) no description available & (reliability: 892.0) & (original description: Putative BnaC01g29800D, Description = BnaC01g29800D protein, PFAM = PF01363)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03050_706516-711152' '(at1g19720 : 956.0) Pentatricopeptide repeat (PPR-like) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast, cytoplasm; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 61333 Blast hits to 15549 proteins in 316 species: Archae - 3; Bacteria - 46; Metazoa - 404; Fungi - 515; Plants - 59134; Viruses - 0; Other Eukaryotes - 1231 (source: NCBI BLink). & (q76c99|rf1_orysa : 165.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1912.0) & (original description: Putative DYW7, Description = Pentatricopeptide repeat-containing protein At1g19720, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03062_801699-804673' '(at2g40240 : 263.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G56030.1); Has 20269 Blast hits to 5655 proteins in 178 species: Archae - 0; Bacteria - 4; Metazoa - 127; Fungi - 39; Plants - 19817; Viruses - 0; Other Eukaryotes - 282 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative At2g40240, Description = Pentatricopeptide repeat-containing protein At2g40240, mitochondrial, PFAM = PF17177;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03076_243838-250315' '(at2g35130 : 806.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1). & (q76c99|rf1_orysa : 182.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1612.0) & (original description: Putative At2g35130, Description = Pentatricopeptide repeat-containing protein At2g35130, PFAM = PF01535;PF01535;PF01535;PF13041;PF13812;PF17177)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03088_412811-417573' '(at5g59900 : 960.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G55840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 275.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1920.0) & (original description: Putative At5g59900, Description = Putative pentatricopeptide repeat-containing protein At5g59900, PFAM = PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03104_277009-280373' '(at1g77170 : 554.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21065.1); Has 36578 Blast hits to 13720 proteins in 224 species: Archae - 0; Bacteria - 18; Metazoa - 87; Fungi - 88; Plants - 35844; Viruses - 0; Other Eukaryotes - 541 (source: NCBI BLink). & (reliability: 1108.0) & (original description: Putative PCMP-E21, Description = Pentatricopeptide repeat-containing protein At1g77170, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03164_667973-675360' '(at2g32230 : 463.0) RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs.; proteinaceous RNase P 1 (PRORP1); CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: proteinaceous RNase P 3 (TAIR:AT4G21900.1); Has 2190 Blast hits to 1686 proteins in 140 species: Archae - 0; Bacteria - 0; Metazoa - 111; Fungi - 4; Plants - 1945; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (reliability: 926.0) & (original description: Putative PRORP1, Description = Multidrug resistance pump, putative isoform 1, PFAM = PF16953;PF17177;PF17177)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03224_1154925-1158520' '(at1g52640 : 604.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G77360.1); Has 37915 Blast hits to 12240 proteins in 287 species: Archae - 2; Bacteria - 38; Metazoa - 426; Fungi - 561; Plants - 35824; Viruses - 0; Other Eukaryotes - 1064 (source: NCBI BLink). & (q76c99|rf1_orysa : 166.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1208.0) & (original description: Putative At1g52640, Description = Pentatricopeptide repeat-containing protein At1g52640, mitochondrial, PFAM = PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03238_1-3304' '(at2g15690 : 384.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G32450.1); Has 33034 Blast hits to 15947 proteins in 677 species: Archae - 2; Bacteria - 822; Metazoa - 2903; Fungi - 1398; Plants - 25666; Viruses - 35; Other Eukaryotes - 2208 (source: NCBI BLink). & (reliability: 768.0) & (original description: Putative PGSC0003DMG402024352, Description = PPR containing plant-like protein, PFAM = PF01535;PF01535;PF01535;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03239_82899-86582' '(at3g61520 : 650.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G28460.1); Has 51879 Blast hits to 14395 proteins in 309 species: Archae - 5; Bacteria - 71; Metazoa - 859; Fungi - 887; Plants - 48189; Viruses - 0; Other Eukaryotes - 1868 (source: NCBI BLink). & (q76c99|rf1_orysa : 269.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1300.0) & (original description: Putative At3g61520, Description = Pentatricopeptide repeat-containing protein At3g61520, mitochondrial, PFAM = PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF13041;PF12854;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03287_68090-70261' '(at4g38150 : 250.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G03560.2); Has 35233 Blast hits to 8000 proteins in 207 species: Archae - 4; Bacteria - 10; Metazoa - 48; Fungi - 167; Plants - 34530; Viruses - 0; Other Eukaryotes - 474 (source: NCBI BLink). & (q76c99|rf1_orysa : 92.4) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 500.0) & (original description: Putative At4g38150, Description = Pentatricopeptide repeat-containing protein At4g38150, PFAM = PF01535;PF01535;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03309_265120-268541' '(at2g36240 : 496.0) pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G09900.1); Has 43076 Blast hits to 12816 proteins in 267 species: Archae - 3; Bacteria - 25; Metazoa - 283; Fungi - 440; Plants - 41291; Viruses - 2; Other Eukaryotes - 1032 (source: NCBI BLink). & (q76c99|rf1_orysa : 162.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 992.0) & (original description: Putative At2g36240, Description = Pentatricopeptide repeat-containing protein At2g36240, PFAM = PF13041;PF13041;PF13041;PF13812;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03326_554787-592966' '(at1g08070 : 361.0) Encodes a chloroplast RNA editing factor.; ORGANELLE TRANSCRIPT PROCESSING 82 (OTP82); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 45065 Blast hits to 15003 proteins in 296 species: Archae - 0; Bacteria - 12; Metazoa - 221; Fungi - 219; Plants - 43815; Viruses - 0; Other Eukaryotes - 798 (source: NCBI BLink). & (q76c99|rf1_orysa : 94.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 722.0) & (original description: Putative glysoja_021328, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03374_601235-610519' '(gnl|cdd|36522 : 299.0) no description available & (at4g22670 : 237.0) HSP70-interacting protein 1 (HIP1); FUNCTIONS IN: binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetraticopeptide domain-containing thioredoxin (TAIR:AT3G17880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 474.0) & (original description: Putative st13, Description = Hsc70-interacting protein, PFAM = PF13181)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03392_292905-297220' '(at1g71420 : 739.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G09950.1); Has 35655 Blast hits to 13198 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 71; Plants - 35090; Viruses - 0; Other Eukaryotes - 461 (source: NCBI BLink). & (q76c99|rf1_orysa : 96.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1478.0) & (original description: Putative PCMP-H70, Description = Pentatricopeptide repeat-containing protein At1g71420, PFAM = PF13041;PF14432;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03403_166719-171452' '(at2g27800 : 435.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT5G27300.1); Has 24911 Blast hits to 8623 proteins in 229 species: Archae - 1; Bacteria - 10; Metazoa - 125; Fungi - 144; Plants - 24131; Viruses - 0; Other Eukaryotes - 500 (source: NCBI BLink). & (reliability: 870.0) & (original description: Putative At2g27800, Description = Pentatricopeptide repeat-containing protein At2g27800, mitochondrial, PFAM = PF01535;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03422_53565-57973' '(at4g19440 : 264.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G55840.1). & (q76c99|rf1_orysa : 244.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 528.0) & (original description: Putative , Description = , PFAM = PF01535;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03432_8597-12222' '(at2g20540 : 657.0) Encodes a pentatricopeptide repeat protein (PPR) protein involved in mitochondrial mRNA editing.; mitochondrial editing factor 21 (MEF21); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G56310.1); Has 36443 Blast hits to 13667 proteins in 251 species: Archae - 0; Bacteria - 21; Metazoa - 39; Fungi - 110; Plants - 35693; Viruses - 0; Other Eukaryotes - 580 (source: NCBI BLink). & (q76c99|rf1_orysa : 87.8) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1314.0) & (original description: Putative MEF21, Description = Pentatricopeptide repeat-containing protein, PFAM = PF13041;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03445_674136-677554' '(at1g80550 : 536.0) Pentatricopeptide repeat (PPR) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G15010.1); Has 29244 Blast hits to 10737 proteins in 246 species: Archae - 4; Bacteria - 10; Metazoa - 174; Fungi - 200; Plants - 28041; Viruses - 0; Other Eukaryotes - 815 (source: NCBI BLink). & (q76c99|rf1_orysa : 114.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1072.0) & (original description: Putative At1g80550, Description = Pentatricopeptide repeat-containing protein At1g80550, mitochondrial, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03455_719953-724003' '(at3g20730 : 468.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G27610.1); Has 41688 Blast hits to 13542 proteins in 246 species: Archae - 0; Bacteria - 10; Metazoa - 149; Fungi - 146; Plants - 40815; Viruses - 0; Other Eukaryotes - 568 (source: NCBI BLink). & (q76c99|rf1_orysa : 84.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 936.0) & (original description: Putative At3g20730, Description = Putative pentatricopeptide repeat-containing protein-like, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03469_489483-493993' '(at3g22690 : 976.0) INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). & (q76c99|rf1_orysa : 110.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1952.0) & (original description: Putative PCMP-H56, Description = Pentatricopeptide repeat-containing protein At3g22690, PFAM = PF14432;PF13812;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03469_515771-518801' '(at3g22670 : 447.0) Pentatricopeptide repeat (PPR) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04130.2); Has 39777 Blast hits to 13686 proteins in 296 species: Archae - 5; Bacteria - 61; Metazoa - 326; Fungi - 524; Plants - 37538; Viruses - 0; Other Eukaryotes - 1323 (source: NCBI BLink). & (q76c99|rf1_orysa : 140.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 894.0) & (original description: Putative At3g22670, Description = Pentatricopeptide repeat-containing protein At3g22670, mitochondrial, PFAM = PF01535;PF01535;PF01535;PF01535;PF12854;PF13812;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03535_105922-109823' '(at2g29760 : 425.0) Encodes a chloroplast RNA editing factor.; ORGANELLE TRANSCRIPT PROCESSING 81 (OTP81); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G08070.1); Has 39055 Blast hits to 14294 proteins in 286 species: Archae - 1; Bacteria - 14; Metazoa - 160; Fungi - 158; Plants - 37962; Viruses - 2; Other Eukaryotes - 758 (source: NCBI BLink). & (q76c99|rf1_orysa : 115.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 850.0) & (original description: Putative , Description = Putative pentatricopeptide repeat-containing protein, mitochondrial-like, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03541_81691-85316' '(at3g51320 : 441.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G62890.1); Has 32632 Blast hits to 12262 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 25; Plants - 32307; Viruses - 0; Other Eukaryotes - 275 (source: NCBI BLink). & (q76c99|rf1_orysa : 93.6) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 882.0) & (original description: Putative At3g51320, Description = Pentatricopeptide repeat-containing protein At3g51320, PFAM = PF01535;PF01535;PF01535;PF01535;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03548_374800-379562' '(at5g61990 : 517.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G59900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 307.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1034.0) & (original description: Putative , Description = , PFAM = PF13812;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF12854;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03565_505811-509712' '(at5g40400 : 601.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G55840.1); Has 45179 Blast hits to 13990 proteins in 287 species: Archae - 4; Bacteria - 20; Metazoa - 378; Fungi - 562; Plants - 43035; Viruses - 0; Other Eukaryotes - 1180 (source: NCBI BLink). & (q76c99|rf1_orysa : 184.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1202.0) & (original description: Putative , Description = , PFAM = PF13041;PF13041;PF13041;PF13041;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03595_105587-109710' '(at5g27110 : 751.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 105.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1502.0) & (original description: Putative PCMP-E14, Description = Pentatricopeptide repeat-containing protein At5g27110, PFAM = PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03607_66317-70983' '(at3g57430 : 1154.0) Encodes a chloroplast RNA editing factor.; ORGANELLE TRANSCRIPT PROCESSING 84 (OTP84); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G11290.1); Has 46517 Blast hits to 13331 proteins in 240 species: Archae - 0; Bacteria - 7; Metazoa - 55; Fungi - 91; Plants - 45789; Viruses - 0; Other Eukaryotes - 575 (source: NCBI BLink). & (q76c99|rf1_orysa : 104.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2308.0) & (original description: Putative CRR22, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF14432;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03607_99889-104039' '(at4g20090 : 813.0) embryo defective 1025 (EMB1025); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G64320.1); Has 50788 Blast hits to 13881 proteins in 299 species: Archae - 2; Bacteria - 48; Metazoa - 729; Fungi - 797; Plants - 47488; Viruses - 0; Other Eukaryotes - 1724 (source: NCBI BLink). & (q76c99|rf1_orysa : 241.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1626.0) & (original description: Putative EMB1025, Description = Pentatricopeptide repeat-containing protein At4g20090, PFAM = PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03624_131989-136520' '(at4g13650 : 476.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G16480.1); Has 61118 Blast hits to 14026 proteins in 284 species: Archae - 2; Bacteria - 18; Metazoa - 154; Fungi - 167; Plants - 59907; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (q76c99|rf1_orysa : 101.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 952.0) & (original description: Putative Os11g0482400, Description = Os11g0482400 protein, PFAM = PF14432;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03659_940789-946446' '(at1g19520 : 652.0) NUCLEAR FUSION DEFECTIVE 5 (NFD5); EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. & (q76c99|rf1_orysa : 100.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1304.0) & (original description: Putative At1g19525, Description = Pentatricopeptide repeat-containing protein At1g19525, PFAM = PF13812;PF13812;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03694_101420-104562' '(at3g13160 : 362.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G55890.1); Has 40331 Blast hits to 13148 proteins in 280 species: Archae - 5; Bacteria - 51; Metazoa - 319; Fungi - 323; Plants - 38622; Viruses - 0; Other Eukaryotes - 1011 (source: NCBI BLink). & (q76c99|rf1_orysa : 115.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 724.0) & (original description: Putative At3g13160, Description = Pentatricopeptide repeat-containing protein At3g13160, mitochondrial, PFAM = PF12854;PF01535;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03702_530345-536152' '(at2g01390 : 553.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G01360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q76c99|rf1_orysa : 102.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1106.0) & (original description: Putative At2g01390/At2g01380, Description = Pentatricopeptide repeat-containing protein At2g01390, PFAM = PF17177;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03714_83590-87320' '(at4g21065 : 473.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G33170.1); Has 42394 Blast hits to 14278 proteins in 275 species: Archae - 0; Bacteria - 13; Metazoa - 126; Fungi - 79; Plants - 41597; Viruses - 0; Other Eukaryotes - 579 (source: NCBI BLink). & (q76c99|rf1_orysa : 81.3) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 946.0) & (original description: Putative otp82, Description = Pentatricopeptide repeat-containing protein, PFAM = PF14432;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03785_58409-62721' '(at1g69350 : 773.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1); Has 50942 Blast hits to 14152 proteins in 270 species: Archae - 0; Bacteria - 36; Metazoa - 125; Fungi - 175; Plants - 49809; Viruses - 0; Other Eukaryotes - 797 (source: NCBI BLink). & (q76c99|rf1_orysa : 89.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1546.0) & (original description: Putative PCMP-E66, Description = Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03817_438727-442277' '(at1g05750 : 576.0) Encodes a pentatricopeptide repeat protein required for editing of rpoA and clpP chloroplast transcripts.; pigment defective 247 (PDE247); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 21 (TAIR:AT2G20540.1); Has 41993 Blast hits to 13871 proteins in 254 species: Archae - 1; Bacteria - 18; Metazoa - 75; Fungi - 77; Plants - 41230; Viruses - 0; Other Eukaryotes - 592 (source: NCBI BLink). & (q76c99|rf1_orysa : 95.9) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1152.0) & (original description: Putative PDE247, Description = Pentatricopeptide repeat-containing protein At1g05750, chloroplastic, PFAM = PF13041;PF13041;PF13041;PF01535;PF12854;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03867_75151-79708' '(at4g19890 : 796.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G39710.1). & (q76c99|rf1_orysa : 239.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1592.0) & (original description: Putative At4g19890, Description = Pentatricopeptide repeat-containing protein At4g19890, PFAM = PF12854;PF13041;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03888_91930-95300' '(at4g14050 : 783.0) Pentatricopeptide repeat (PPR) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G68930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 90.9) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1566.0) & (original description: Putative dl3066c, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03900_27377-31018' '(at5g18475 : 530.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G53700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q76c99|rf1_orysa : 156.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1060.0) & (original description: Putative At5g18475, Description = Pentatricopeptide repeat-containing protein At5g18475, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03903_223190-227517' '(at3g58590 : 694.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G02330.1); Has 50517 Blast hits to 13015 proteins in 216 species: Archae - 0; Bacteria - 2; Metazoa - 99; Fungi - 53; Plants - 49733; Viruses - 0; Other Eukaryotes - 630 (source: NCBI BLink). & (q76c99|rf1_orysa : 112.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1388.0) & (original description: Putative At3g58590, Description = Pentatricopeptide repeat-containing protein At3g58590, PFAM = PF13812;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03918_67119-70979' '(at1g08610 : 540.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G09900.1); Has 46651 Blast hits to 12655 proteins in 271 species: Archae - 5; Bacteria - 25; Metazoa - 357; Fungi - 448; Plants - 44319; Viruses - 0; Other Eukaryotes - 1497 (source: NCBI BLink). & (q76c99|rf1_orysa : 197.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1080.0) & (original description: Putative At1g08610, Description = Pentatricopeptide repeat-containing protein At1g08610, PFAM = PF13041;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03918_76386-80143' '(at3g04760 : 694.0) Pentatricopeptide repeat (PPR-like) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G09900.1); Has 62164 Blast hits to 15231 proteins in 315 species: Archae - 6; Bacteria - 70; Metazoa - 1026; Fungi - 1135; Plants - 57538; Viruses - 0; Other Eukaryotes - 2389 (source: NCBI BLink). & (q76c99|rf1_orysa : 263.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1388.0) & (original description: Putative At3g04760, Description = Pentatricopeptide repeat-containing protein At3g04760, chloroplastic, PFAM = PF12854;PF12854;PF12854;PF13812;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03930_320329-324871' '(at1g52620 : 788.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G74580.1); Has 57261 Blast hits to 14054 proteins in 301 species: Archae - 5; Bacteria - 49; Metazoa - 836; Fungi - 993; Plants - 53641; Viruses - 0; Other Eukaryotes - 1737 (source: NCBI BLink). & (q76c99|rf1_orysa : 254.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1576.0) & (original description: Putative At1g52620, Description = Pentatricopeptide repeat-containing protein At1g52620, PFAM = PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03930_330472-334133' '(at1g52640 : 627.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G77360.1); Has 37915 Blast hits to 12240 proteins in 287 species: Archae - 2; Bacteria - 38; Metazoa - 426; Fungi - 561; Plants - 35824; Viruses - 0; Other Eukaryotes - 1064 (source: NCBI BLink). & (q76c99|rf1_orysa : 145.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1254.0) & (original description: Putative At1g52640, Description = Pentatricopeptide repeat-containing protein At1g52640, mitochondrial, PFAM = PF12854;PF17177;PF13041;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03946_112161-116329' '(at5g19020 : 736.0) Encodes a pentatricopeptide repeat protein (PPR) protein involved in mitochondrial mRNA editing.; mitochondrial editing factor 18 (MEF18); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 115.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1472.0) & (original description: Putative MEF18, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF12854;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03971_9916-13499' '(at2g20540 : 380.0) Encodes a pentatricopeptide repeat protein (PPR) protein involved in mitochondrial mRNA editing.; mitochondrial editing factor 21 (MEF21); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G56310.1); Has 36443 Blast hits to 13667 proteins in 251 species: Archae - 0; Bacteria - 21; Metazoa - 39; Fungi - 110; Plants - 35693; Viruses - 0; Other Eukaryotes - 580 (source: NCBI BLink). & (q76c99|rf1_orysa : 80.5) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 760.0) & (original description: Putative glysoja_034540, Description = Pentatricopeptide repeat-containing protein, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03971_120664-124187' '(at1g26500 : 608.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G62470.1); Has 19147 Blast hits to 7603 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 126; Plants - 18834; Viruses - 0; Other Eukaryotes - 167 (source: NCBI BLink). & (q76c99|rf1_orysa : 95.1) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1216.0) & (original description: Putative At1g26500, Description = Putative pentatricopeptide repeat-containing protein At1g26500, PFAM = PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf03979_553256-557793' '(at2g18940 : 1070.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has 70772 Blast hits to 15680 proteins in 317 species: Archae - 4; Bacteria - 89; Metazoa - 1190; Fungi - 1125; Plants - 65689; Viruses - 0; Other Eukaryotes - 2675 (source: NCBI BLink). & (q76c99|rf1_orysa : 226.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2140.0) & (original description: Putative At2g18940, Description = Pentatricopeptide repeat-containing protein At2g18940, chloroplastic, PFAM = PF01535;PF13812;PF13812;PF13812;PF13041;PF13041;PF13041;PF13041;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04001_670914-674746' '(at5g52630 : 803.0) Encodes a member of the DYW subfamily of pentatricopeptide repeat (PPR) proteins. Loss of MEF1 function affects RNA editing at specific sites in the mitochondrial genome but do not exhibit obvious phenotypes.; mitochondrial RNAediting factor 1 (MEF1); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G04780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1606.0) & (original description: Putative MEF1, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF14432;PF17177)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04011_147209-151563' '(at2g22070 : 1051.0) pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G25360.1); Has 47939 Blast hits to 14346 proteins in 287 species: Archae - 0; Bacteria - 20; Metazoa - 98; Fungi - 122; Plants - 46979; Viruses - 0; Other Eukaryotes - 720 (source: NCBI BLink). & (q76c99|rf1_orysa : 99.8) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2102.0) & (original description: Putative PCMP-H41, Description = Pentatricopeptide repeat-containing protein At2g22070, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04011_155685-161012' '(at4g39620 : 609.0) EMBRYO DEFECTIVE 2453 (EMB2453); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 2 (TAIR:AT1G74850.1). & (q76c99|rf1_orysa : 139.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1218.0) & (original description: Putative ppr5, Description = Pentatricopeptide repeat 5, PFAM = PF01535;PF01535;PF13812;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04024_146868-151168' '(at1g22960 : 599.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G01110.1); Has 58924 Blast hits to 14815 proteins in 307 species: Archae - 4; Bacteria - 65; Metazoa - 926; Fungi - 1075; Plants - 54939; Viruses - 0; Other Eukaryotes - 1915 (source: NCBI BLink). & (q76c99|rf1_orysa : 266.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1198.0) & (original description: Putative At1g22960, Description = Pentatricopeptide repeat-containing protein At1g22960, mitochondrial, PFAM = PF13041;PF13041;PF13041;PF13041;PF13041;PF12854;PF12854;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04042_1-3401' '(at1g09900 : 847.0) Pentatricopeptide repeat (PPR-like) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT3G04760.1); Has 67710 Blast hits to 15322 proteins in 310 species: Archae - 4; Bacteria - 73; Metazoa - 1094; Fungi - 1217; Plants - 62670; Viruses - 0; Other Eukaryotes - 2652 (source: NCBI BLink). & (q76c99|rf1_orysa : 287.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1694.0) & (original description: Putative At1g09900, Description = Pentatricopeptide repeat-containing protein At1g09900, PFAM = PF12854;PF12854;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04052_275218-279629' '(at1g03100 : 927.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G17616.1); Has 9904 Blast hits to 5133 proteins in 176 species: Archae - 0; Bacteria - 34; Metazoa - 111; Fungi - 31; Plants - 9502; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (reliability: 1854.0) & (original description: Putative At1g03100, Description = Pentatricopeptide repeat-containing protein At1g03100, mitochondrial, PFAM = PF13041;PF13812;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04077_179928-184010' '(at1g10330 : 417.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G66520.1); Has 31141 Blast hits to 12595 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 63; Fungi - 42; Plants - 30558; Viruses - 0; Other Eukaryotes - 478 (source: NCBI BLink). & (reliability: 834.0) & (original description: Putative PCMP-E71, Description = Putative pentatricopeptide repeat-containing protein At1g10330, PFAM = PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04133_158188-163160' '(at5g62370 : 651.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G65560.1); Has 62242 Blast hits to 13624 proteins in 288 species: Archae - 4; Bacteria - 32; Metazoa - 555; Fungi - 723; Plants - 59384; Viruses - 0; Other Eukaryotes - 1544 (source: NCBI BLink). & (q76c99|rf1_orysa : 204.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1302.0) & (original description: Putative , Description = , PFAM = PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF12854;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04133_159584-162989' '(at5g62370 : 239.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G65560.1); Has 62242 Blast hits to 13624 proteins in 288 species: Archae - 4; Bacteria - 32; Metazoa - 555; Fungi - 723; Plants - 59384; Viruses - 0; Other Eukaryotes - 1544 (source: NCBI BLink). & (q76c99|rf1_orysa : 129.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 478.0) & (original description: Putative , Description = , PFAM = PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04133_243114-246721' '(at5g15300 : 646.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G29230.1); Has 37071 Blast hits to 13818 proteins in 252 species: Archae - 0; Bacteria - 21; Metazoa - 136; Fungi - 146; Plants - 36104; Viruses - 0; Other Eukaryotes - 664 (source: NCBI BLink). & (q76c99|rf1_orysa : 90.1) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1292.0) & (original description: Putative PCMP-E40, Description = Pentatricopeptide repeat-containing protein At5g15300, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04187_182370-188182' '(at1g13630 : 583.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G22470.1). & (q76c99|rf1_orysa : 219.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1166.0) & (original description: Putative At1g13630, Description = Putative pentatricopeptide repeat-containing protein At1g13630, PFAM = PF12854;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04217_1156190-1159397' '(at2g22410 : 443.0) SLOW GROWTH 1 (SLO1); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 42589 Blast hits to 14346 proteins in 282 species: Archae - 0; Bacteria - 11; Metazoa - 210; Fungi - 265; Plants - 41374; Viruses - 0; Other Eukaryotes - 729 (source: NCBI BLink). & (q76c99|rf1_orysa : 103.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 886.0) & (original description: Putative At2g13600, Description = Os01g0176300 protein, PFAM = PF13041;PF13041;PF13041;PF12854;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04237_57409-61376' '(at1g79080 : 710.0) Pentatricopeptide repeat (PPR) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G09900.1); Has 46001 Blast hits to 12732 proteins in 282 species: Archae - 3; Bacteria - 36; Metazoa - 518; Fungi - 600; Plants - 43410; Viruses - 0; Other Eukaryotes - 1434 (source: NCBI BLink). & (q76c99|rf1_orysa : 206.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1420.0) & (original description: Putative At1g79080, Description = Pentatricopeptide repeat-containing protein At1g79080, chloroplastic, PFAM = PF12854;PF12854;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04240_309710-312951' '(at4g36680 : 466.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G18520.1); Has 31603 Blast hits to 11701 proteins in 258 species: Archae - 3; Bacteria - 12; Metazoa - 242; Fungi - 164; Plants - 30323; Viruses - 0; Other Eukaryotes - 859 (source: NCBI BLink). & (q76c99|rf1_orysa : 141.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 932.0) & (original description: Putative At4g36680, Description = Pentatricopeptide repeat-containing protein At4g36680, mitochondrial, PFAM = PF13041;PF13041;PF13041;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04318_4562-9258' '(at5g65560 : 531.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G77340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 328.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1062.0) & (original description: Putative , Description = , PFAM = PF12854;PF12854;PF13041;PF13041;PF13041;PF13041;PF13041;PF13812;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04329_14530-18587' '(at3g08820 : 788.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G08070.1); Has 39810 Blast hits to 14024 proteins in 269 species: Archae - 0; Bacteria - 17; Metazoa - 144; Fungi - 84; Plants - 38977; Viruses - 0; Other Eukaryotes - 588 (source: NCBI BLink). & (q76c99|rf1_orysa : 92.8) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1576.0) & (original description: Putative otp82, Description = Organelle transcript processing 82, PFAM = PF01535;PF01535;PF14432;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04329_651487-655223' '(at3g11460 : 801.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G30700.1); Has 38316 Blast hits to 13864 proteins in 256 species: Archae - 0; Bacteria - 8; Metazoa - 61; Fungi - 80; Plants - 37599; Viruses - 0; Other Eukaryotes - 568 (source: NCBI BLink). & (q76c99|rf1_orysa : 99.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1602.0) & (original description: Putative ppr, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF01535;PF14432;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04392_522196-526385' '(at3g49740 : 707.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G02010.1); Has 46649 Blast hits to 13426 proteins in 218 species: Archae - 0; Bacteria - 21; Metazoa - 50; Fungi - 114; Plants - 45895; Viruses - 0; Other Eukaryotes - 569 (source: NCBI BLink). & (q76c99|rf1_orysa : 103.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1414.0) & (original description: Putative PCMP-E84, Description = Pentatricopeptide repeat-containing protein At3g49740, PFAM = PF12854;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04396_227157-231826' '(at5g03800 : 907.0) Encodes a protein with a large central domain of 14 internal pentatricopeptide motifs (some degenerate) arranged in tandem. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 175 (EMB175); FUNCTIONS IN: catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast, membrane; EXPRESSED IN: root, flower, leaf; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G49170.1); Has 41516 Blast hits to 13216 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 24; Fungi - 21; Plants - 41054; Viruses - 0; Other Eukaryotes - 417 (source: NCBI BLink). & (q76c99|rf1_orysa : 85.5) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1814.0) & (original description: Putative EMB175, Description = Pentatricopeptide repeat-containing protein At5g03800, PFAM = PF14432;PF13812;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04421_34433-38868' '(at5g12100 : 747.0) pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G65560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 256.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1494.0) & (original description: Putative At5g12100, Description = Pentatricopeptide repeat-containing protein At5g12100, mitochondrial, PFAM = PF12854;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04505_275311-284931' '(at5g42310 : 352.0) Pentatricopeptide repeat (PPR-like) superfamily protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G22470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 152.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 704.0) & (original description: Putative Sb02g035800, Description = Putative uncharacterized protein Sb02g035800, PFAM = PF13812;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04528_235152-238540' '(at1g53330 : 398.0) encodes a member of the pentatricopeptide repeat (PPR) gene family. T-DNA insertion mutants had a complex phenotypic expression, ranging from embryo lethal to seedling lethal, to just subtle changes.; Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: rna processing factor 2 (TAIR:AT1G62670.1); Has 42827 Blast hits to 13568 proteins in 292 species: Archae - 4; Bacteria - 35; Metazoa - 401; Fungi - 615; Plants - 40434; Viruses - 0; Other Eukaryotes - 1338 (source: NCBI BLink). & (q76c99|rf1_orysa : 136.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 796.0) & (original description: Putative At1g53330, Description = Putative pentatricopeptide repeat-containing protein At1g53330, PFAM = PF13812;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04554_584950-598335' '(at5g24830 : 498.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G63080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 210.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 996.0) & (original description: Putative At5g24830, Description = Pentatricopeptide repeat-containing protein At5g24830, PFAM = PF01535;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04598_22521-27918' '(at1g10270 : 533.0) glutamine-rich protein 23 (GRP23); FUNCTIONS IN: binding; INVOLVED IN: embryo development, cell division; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G49240.1); Has 43483 Blast hits to 18975 proteins in 889 species: Archae - 27; Bacteria - 1738; Metazoa - 7010; Fungi - 2820; Plants - 24944; Viruses - 157; Other Eukaryotes - 6787 (source: NCBI BLink). & (q76c99|rf1_orysa : 107.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1066.0) & (original description: Putative GRP23, Description = Glutamine-rich protein 23, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04607_242098-250615' '(at5g67570 : 733.0) Encodes a pentratricopeptide repeat containing protein that is targeted to the chloroplast. Mutants have pale young leave and reduced accumulation of plastid encoded transcripts suggesting a role for DG1 in regulation of plastid gene expression.; DELAYED GREENING 1 (DG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chloroplast organization, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G30610.2); Has 18472 Blast hits to 7295 proteins in 194 species: Archae - 0; Bacteria - 17; Metazoa - 30; Fungi - 92; Plants - 17734; Viruses - 0; Other Eukaryotes - 599 (source: NCBI BLink). & (q76c99|rf1_orysa : 81.3) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1466.0) & (original description: Putative DG1, Description = Pentatricopeptide repeat-containing protein At5g67570, chloroplastic, PFAM = PF01535;PF01535;PF01535;PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04609_121835-149357' '(at3g14580 : 238.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has 35779 Blast hits to 10850 proteins in 252 species: Archae - 2; Bacteria - 9; Metazoa - 300; Fungi - 243; Plants - 34331; Viruses - 0; Other Eukaryotes - 894 (source: NCBI BLink). & (reliability: 476.0) & (original description: Putative At3g14580, Description = H0313F03.9 protein, PFAM = PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04697_201678-205654' '(at2g03880 : 941.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G24000.1); Has 41924 Blast hits to 14587 proteins in 276 species: Archae - 3; Bacteria - 26; Metazoa - 84; Fungi - 128; Plants - 40967; Viruses - 0; Other Eukaryotes - 716 (source: NCBI BLink). & (q76c99|rf1_orysa : 117.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1882.0) & (original description: Putative crr2, Description = Pentatricopeptide (PPR) repeat protein, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04727_218690-223839' '(at5g61990 : 498.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G59900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 230.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 996.0) & (original description: Putative , Description = , PFAM = PF13041;PF13041;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535;PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04749_6158-9504' '(at3g62890 : 519.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G40405.1); Has 35241 Blast hits to 13566 proteins in 229 species: Archae - 0; Bacteria - 18; Metazoa - 37; Fungi - 30; Plants - 34726; Viruses - 0; Other Eukaryotes - 430 (source: NCBI BLink). & (q76c99|rf1_orysa : 91.3) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1038.0) & (original description: Putative ELI1, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF12854;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04772_160154-164917' '(at1g74580 : 956.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G64320.1); Has 62554 Blast hits to 14470 proteins in 307 species: Archae - 5; Bacteria - 62; Metazoa - 860; Fungi - 1230; Plants - 58100; Viruses - 0; Other Eukaryotes - 2297 (source: NCBI BLink). & (q76c99|rf1_orysa : 287.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1912.0) & (original description: Putative At1g74580, Description = Putative pentatricopeptide repeat-containing protein At1g74580, PFAM = PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF12854;PF12854;PF12854;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04772_176347-180998' '(at1g74600 : 893.0) pentatricopeptide (PPR) repeat-containing protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 58662 Blast hits to 14057 proteins in 256 species: Archae - 2; Bacteria - 61; Metazoa - 165; Fungi - 118; Plants - 57459; Viruses - 0; Other Eukaryotes - 857 (source: NCBI BLink). & (q76c99|rf1_orysa : 106.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1786.0) & (original description: Putative PCMP-E69, Description = Pentatricopeptide repeat-containing protein At1g74600, chloroplastic, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04819_434745-440657' '(at1g09220 : 410.0) Pentatricopeptide repeat (PPR) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 21 (TAIR:AT2G20540.1); Has 31696 Blast hits to 12551 proteins in 166 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 19; Plants - 31380; Viruses - 0; Other Eukaryotes - 282 (source: NCBI BLink). & (q76c99|rf1_orysa : 87.4) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 820.0) & (original description: Putative pco083348, Description = Pentatricopeptide repeat-containing protein At1g09220, mitochondrial, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04827_577360-581568' '(at1g56570 : 670.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 40728 Blast hits to 13683 proteins in 261 species: Archae - 0; Bacteria - 8; Metazoa - 114; Fungi - 83; Plants - 40006; Viruses - 0; Other Eukaryotes - 517 (source: NCBI BLink). & (reliability: 1340.0) & (original description: Putative PCMP-E64, Description = Putative pentatricopeptide repeat-containing protein At1g56570, PFAM = PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04921_63032-67926' '(at4g39530 : 836.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 58623 Blast hits to 14407 proteins in 286 species: Archae - 2; Bacteria - 7; Metazoa - 151; Fungi - 177; Plants - 57378; Viruses - 0; Other Eukaryotes - 908 (source: NCBI BLink). & (q76c99|rf1_orysa : 105.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1672.0) & (original description: Putative PCMP-E52, Description = Pentatricopeptide repeat-containing protein At4g39530, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04926_599857-603576' '(at1g02060 : 765.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G37230.1); Has 43508 Blast hits to 14040 proteins in 293 species: Archae - 4; Bacteria - 48; Metazoa - 396; Fungi - 632; Plants - 41173; Viruses - 0; Other Eukaryotes - 1255 (source: NCBI BLink). & (q76c99|rf1_orysa : 182.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1530.0) & (original description: Putative At1g02060, Description = Pentatricopeptide repeat-containing protein At1g02060, chloroplastic, PFAM = PF13041;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04934_574289-579520' '(at5g06400 : 1006.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: proton gradient regulation 3 (TAIR:AT4G31850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 135.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2012.0) & (original description: Putative At5g06400, Description = Putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial, PFAM = PF13812;PF13812;PF13041;PF13041;PF13041;PF13041;PF12854;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf04993_143988-147616' '(at3g51320 : 463.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G62890.1); Has 32632 Blast hits to 12262 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 25; Plants - 32307; Viruses - 0; Other Eukaryotes - 275 (source: NCBI BLink). & (q76c99|rf1_orysa : 96.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 926.0) & (original description: Putative At3g51320, Description = Pentatricopeptide repeat-containing protein At3g51320, PFAM = PF01535;PF01535;PF01535;PF01535;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05060_808437-811394' '(at5g15300 : 644.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G29230.1); Has 37071 Blast hits to 13818 proteins in 252 species: Archae - 0; Bacteria - 21; Metazoa - 136; Fungi - 146; Plants - 36104; Viruses - 0; Other Eukaryotes - 664 (source: NCBI BLink). & (q76c99|rf1_orysa : 94.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1288.0) & (original description: Putative At5g15300, Description = Pentatricopeptide repeat-containing protein, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05087_545725-548036' '(at3g50420 : 111.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 48124 Blast hits to 13590 proteins in 226 species: Archae - 0; Bacteria - 6; Metazoa - 116; Fungi - 107; Plants - 47293; Viruses - 0; Other Eukaryotes - 602 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative At3g50420, Description = Pentatricopeptide repeat-containing protein At3g50420, PFAM = PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05160_30603-38887' '(at3g46870 : 303.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G62350.1); Has 7906 Blast hits to 3591 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 82; Plants - 7752; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (reliability: 606.0) & (original description: Putative At3g46870, Description = Pentatricopeptide repeat-containing protein At3g46870, PFAM = PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05171_86249-90727' '(at3g61170 : 854.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G27610.1); Has 48118 Blast hits to 13655 proteins in 239 species: Archae - 0; Bacteria - 10; Metazoa - 89; Fungi - 49; Plants - 47457; Viruses - 0; Other Eukaryotes - 513 (source: NCBI BLink). & (q76c99|rf1_orysa : 100.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1708.0) & (original description: Putative BnaA09g38800D, Description = BnaA09g38800D protein, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05177_190524-194271' '(at2g13600 : 847.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 46660 Blast hits to 13875 proteins in 226 species: Archae - 0; Bacteria - 4; Metazoa - 74; Fungi - 58; Plants - 45878; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (q76c99|rf1_orysa : 91.3) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1694.0) & (original description: Putative PCMP-E76, Description = Pentatricopeptide repeat-containing protein At2g13600, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05201_792514-797690' '(at4g28010 : 544.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: rna processing factor 2 (TAIR:AT1G62670.1); Has 64686 Blast hits to 15009 proteins in 313 species: Archae - 9; Bacteria - 69; Metazoa - 819; Fungi - 1094; Plants - 60516; Viruses - 0; Other Eukaryotes - 2179 (source: NCBI BLink). & (q76c99|rf1_orysa : 288.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1088.0) & (original description: Putative At4g28010, Description = Pentatricopeptide repeat-containing protein At4g28010, PFAM = PF01535;PF01535;PF01535;PF13812;PF12854;PF12854;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05245_448189-451844' '(at5g43820 : 606.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G15010.1); Has 33976 Blast hits to 11353 proteins in 260 species: Archae - 0; Bacteria - 8; Metazoa - 169; Fungi - 383; Plants - 32575; Viruses - 0; Other Eukaryotes - 841 (source: NCBI BLink). & (q76c99|rf1_orysa : 121.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1212.0) & (original description: Putative At5g43820, Description = Putative pentatricopeptide repeat-containing protein At5g43820, PFAM = PF13041;PF12854;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05278_107362-111260' '(at2g13600 : 379.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 46660 Blast hits to 13875 proteins in 226 species: Archae - 0; Bacteria - 4; Metazoa - 74; Fungi - 58; Plants - 45878; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (q76c99|rf1_orysa : 99.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 758.0) & (original description: Putative , Description = Putative pentatricopeptide (PPR) repeat-containing protein, PFAM = PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05278_116414-120081' '(at5g59600 : 555.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G33990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 104.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1110.0) & (original description: Putative PCMP-E1, Description = Pentatricopeptide repeat-containing protein At5g59600, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05306_310198-313661' '(at2g37320 : 496.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G24000.1); Has 40972 Blast hits to 13911 proteins in 248 species: Archae - 0; Bacteria - 4; Metazoa - 85; Fungi - 62; Plants - 40344; Viruses - 0; Other Eukaryotes - 477 (source: NCBI BLink). & (reliability: 992.0) & (original description: Putative PCMP-E50, Description = Pentatricopeptide repeat-containing protein At2g37320, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05306_352908-357166' '(at3g53360 : 853.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G39530.1); Has 50551 Blast hits to 14033 proteins in 266 species: Archae - 0; Bacteria - 13; Metazoa - 180; Fungi - 93; Plants - 49461; Viruses - 0; Other Eukaryotes - 804 (source: NCBI BLink). & (q76c99|rf1_orysa : 120.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1706.0) & (original description: Putative PCMP-E86, Description = Pentatricopeptide repeat-containing protein At3g53360, mitochondrial, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05314_62317-66290' '(at2g15690 : 513.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G32450.1); Has 33034 Blast hits to 15947 proteins in 677 species: Archae - 2; Bacteria - 822; Metazoa - 2903; Fungi - 1398; Plants - 25666; Viruses - 35; Other Eukaryotes - 2208 (source: NCBI BLink). & (reliability: 1026.0) & (original description: Putative BnaA03g38850D, Description = BnaA03g38850D protein, PFAM = PF14432;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05330_222229-225461' '(at1g80150 : 488.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: fruit; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G36680.1); Has 20922 Blast hits to 6391 proteins in 198 species: Archae - 3; Bacteria - 20; Metazoa - 73; Fungi - 116; Plants - 20269; Viruses - 0; Other Eukaryotes - 441 (source: NCBI BLink). & (q76c99|rf1_orysa : 93.6) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 976.0) & (original description: Putative At1g80150, Description = Pentatricopeptide repeat-containing protein At1g80150, mitochondrial, PFAM = PF13041;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05368_219320-222105' '(at5g15010 : 185.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G80880.1); Has 37863 Blast hits to 13191 proteins in 288 species: Archae - 3; Bacteria - 35; Metazoa - 443; Fungi - 342; Plants - 35932; Viruses - 0; Other Eukaryotes - 1108 (source: NCBI BLink). & (reliability: 370.0) & (original description: Putative , Description = , PFAM = PF17177)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05382_377869-383882' '(at2g15820 : 793.0) Encodes a protein that promotes splicing of type II introns. otp51 mutants fail to splice intron 2 of plastid ycf3 transcripts, a factor required for the assembly of Photosystem I. Therefore, homozygous otp51 mutants have profound photosynthetic defects and can only survive in sucrose-supplemented in vitro cultures under low light conditions. OTP51 may also be involved in splicing several other transcripts and precursor forms of the trnL, trnG, trnI, and trnA transcripts also accumulate in otp51 mutants. Although OTP51 shares some homology with DNA endonucleases, it lacks key catalytic residues suggesting that it does not participate in DNA cleavage.; ORGANELLE TRANSCRIPT PROCESSING 51 (OTP51); FUNCTIONS IN: endonuclease activity; INVOLVED IN: photosystem I assembly, nuclear mRNA cis splicing, via spliceosome, Group II intron splicing; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), LAGLIDADG DNA endonuclease (InterPro:IPR004860); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G61990.1); Has 8373 Blast hits to 4744 proteins in 190 species: Archae - 0; Bacteria - 4; Metazoa - 37; Fungi - 65; Plants - 8172; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|86259 : 102.0) no description available & (reliability: 1586.0) & (original description: Putative OTP51, Description = Pentatricopeptide repeat-containing protein At2g15820, chloroplastic, PFAM = PF03161;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05395_440969-445155' '(at5g64320 : 842.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G74580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 288.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1684.0) & (original description: Putative PGSC0003DMG400017527, Description = Pentatricopeptide repeat-containing protein At5g64320, mitochondrial, PFAM = PF12854;PF12854;PF01535;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05402_14183-19269' '(at1g73710 : 1093.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G23020.1); Has 67480 Blast hits to 15556 proteins in 325 species: Archae - 2; Bacteria - 89; Metazoa - 1013; Fungi - 877; Plants - 63572; Viruses - 0; Other Eukaryotes - 1927 (source: NCBI BLink). & (q76c99|rf1_orysa : 176.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2186.0) & (original description: Putative At1g73710, Description = Pentatricopeptide repeat-containing protein At1g73710, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13812;PF13041;PF13041;PF17177)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05417_440185-443741' '(at5g60960 : 552.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G61370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 100.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1104.0) & (original description: Putative PNM1, Description = Pentatricopeptide repeat-containing protein PNM1, mitochondrial, PFAM = PF13812;PF01535;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05535_338705-342600' '(at2g35030 : 672.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 50772 Blast hits to 15060 proteins in 312 species: Archae - 12; Bacteria - 55; Metazoa - 198; Fungi - 231; Plants - 49530; Viruses - 0; Other Eukaryotes - 746 (source: NCBI BLink). & (q76c99|rf1_orysa : 121.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1344.0) & (original description: Putative PCMP-E15, Description = Pentatricopeptide repeat-containing protein At2g35030, mitochondrial, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05617_131911-135297' '(at5g08510 : 604.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G44230.1); Has 37926 Blast hits to 14003 proteins in 252 species: Archae - 2; Bacteria - 4; Metazoa - 48; Fungi - 107; Plants - 37187; Viruses - 0; Other Eukaryotes - 578 (source: NCBI BLink). & (q76c99|rf1_orysa : 102.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1208.0) & (original description: Putative ELI1, Description = Pentatricopeptide repeat-containing protein, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05617_163070-166752' '(at5g16420 : 635.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G53700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 198.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1270.0) & (original description: Putative At5g16420, Description = Pentatricopeptide repeat-containing protein At5g16420, mitochondrial, PFAM = PF13812;PF13041;PF13041;PF13041;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05649_577125-581290' '(at2g37230 : 906.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G02060.1); Has 41954 Blast hits to 13568 proteins in 300 species: Archae - 4; Bacteria - 36; Metazoa - 406; Fungi - 591; Plants - 39794; Viruses - 0; Other Eukaryotes - 1123 (source: NCBI BLink). & (q76c99|rf1_orysa : 162.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1812.0) & (original description: Putative At2g37230, Description = Pentatricopeptide repeat-containing protein At2g37230, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05680_106927-111671' '(at3g03580 : 981.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1); Has 54534 Blast hits to 14239 proteins in 270 species: Archae - 2; Bacteria - 13; Metazoa - 57; Fungi - 143; Plants - 53473; Viruses - 0; Other Eukaryotes - 846 (source: NCBI BLink). & (q76c99|rf1_orysa : 92.4) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1962.0) & (original description: Putative PCMP-H23, Description = Pentatricopeptide repeat-containing protein At3g03580, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05710_68790-72601' '(at4g13650 : 337.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G16480.1); Has 61118 Blast hits to 14026 proteins in 284 species: Archae - 2; Bacteria - 18; Metazoa - 154; Fungi - 167; Plants - 59907; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (q76c99|rf1_orysa : 86.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 674.0) & (original description: Putative , Description = , PFAM = PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05712_299927-303711' '(at2g02980 : 765.0) Encodes a chloroplast RNA editing factor.; ORGANELLE TRANSCRIPT PROCESSING 85 (OTP85); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G66520.1); Has 39959 Blast hits to 14548 proteins in 281 species: Archae - 3; Bacteria - 7; Metazoa - 132; Fungi - 233; Plants - 38891; Viruses - 0; Other Eukaryotes - 693 (source: NCBI BLink). & (q76c99|rf1_orysa : 81.3) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1530.0) & (original description: Putative otp82, Description = Pentatricopeptide repeat-containing protein, PFAM = PF14432;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05749_325372-329861' '(at5g02860 : 1091.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G18940.1); Has 78068 Blast hits to 16233 proteins in 339 species: Archae - 4; Bacteria - 143; Metazoa - 1692; Fungi - 1544; Plants - 71427; Viruses - 0; Other Eukaryotes - 3258 (source: NCBI BLink). & (q76c99|rf1_orysa : 259.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2182.0) & (original description: Putative At5g02860, Description = Pentatricopeptide repeat-containing protein At5g02860, PFAM = PF13041;PF13041;PF13812;PF13812;PF13812;PF13812;PF13812;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05764_23380-27338' '(at5g44230 : 814.0) Pentatricopeptide repeat (PPR) superfamily protein; EXPRESSED IN: embryo, leaf; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 34838 Blast hits to 13612 proteins in 233 species: Archae - 0; Bacteria - 9; Metazoa - 42; Fungi - 69; Plants - 34172; Viruses - 0; Other Eukaryotes - 546 (source: NCBI BLink). & (q76c99|rf1_orysa : 97.1) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1628.0) & (original description: Putative OTP81, Description = Pentatricopeptide repeat-containing family protein, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05813_388018-508781' '(at4g18750 : 381.0) Encodes a pentatricopeptide (PPR) protein involved in leaf and root development. dot4 mutants have an aberrant midgap venation pattern in juvenile leaves and cotyledons.; DEFECTIVELY ORGANIZED TRIBUTARIES 4 (DOT4); INVOLVED IN: cotyledon vascular tissue pattern formation, phloem or xylem histogenesis, leaf vascular tissue pattern formation, leaf development; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G16860.1); Has 49728 Blast hits to 14531 proteins in 279 species: Archae - 0; Bacteria - 13; Metazoa - 210; Fungi - 140; Plants - 48642; Viruses - 0; Other Eukaryotes - 723 (source: NCBI BLink). & (q76c99|rf1_orysa : 116.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 762.0) & (original description: Putative glysoja_035799, Description = Pentatricopeptide repeat-containing protein, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05819_16630-21730' '(at4g30825 : 1053.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Cdk-activating kinase assembly factor (MAT1) (InterPro:IPR004575); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G06920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 126.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2106.0) & (original description: Putative At4g30825, Description = Pentatricopeptide repeat-containing protein At4g30825, chloroplastic, PFAM = PF17177;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05830_443771-448419' '(at4g13650 : 635.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G16480.1); Has 61118 Blast hits to 14026 proteins in 284 species: Archae - 2; Bacteria - 18; Metazoa - 154; Fungi - 167; Plants - 59907; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (q76c99|rf1_orysa : 100.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1270.0) & (original description: Putative glysoja_045190, Description = Pentatricopeptide repeat-containing protein, chloroplastic, PFAM = PF12854;PF14432;PF13041;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05855_173107-176939' '(at2g44880 : 665.0) Pentatricopeptide repeat (PPR-like) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G29230.1); Has 36784 Blast hits to 13843 proteins in 210 species: Archae - 0; Bacteria - 9; Metazoa - 10; Fungi - 56; Plants - 36313; Viruses - 0; Other Eukaryotes - 396 (source: NCBI BLink). & (q76c99|rf1_orysa : 104.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1330.0) & (original description: Putative PCMP-E9, Description = Pentatricopeptide repeat-containing protein At2g44880, PFAM = PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05855_455325-459436' '(at3g25970 : 710.0) Pentatricopeptide repeat (PPR) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 41202 Blast hits to 13044 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 129; Fungi - 58; Plants - 40527; Viruses - 0; Other Eukaryotes - 488 (source: NCBI BLink). & (q76c99|rf1_orysa : 97.1) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1420.0) & (original description: Putative PCMP-E46, Description = Putative pentatricopeptide repeat-containing protein At3g25970, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf05917_328636-334139' '(at1g01970 : 407.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G19520.1); Has 15559 Blast hits to 6864 proteins in 176 species: Archae - 0; Bacteria - 16; Metazoa - 92; Fungi - 19; Plants - 15148; Viruses - 0; Other Eukaryotes - 284 (source: NCBI BLink). & (q76c99|rf1_orysa : 85.5) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 814.0) & (original description: Putative At1g01970, Description = Pentatricopeptide repeat-containing protein At1g01970, PFAM = PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf06026_287530-291335' '(at3g29230 : 768.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 41738 Blast hits to 14344 proteins in 280 species: Archae - 0; Bacteria - 4; Metazoa - 166; Fungi - 161; Plants - 40664; Viruses - 0; Other Eukaryotes - 743 (source: NCBI BLink). & (q76c99|rf1_orysa : 102.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1536.0) & (original description: Putative PCMP-E27, Description = Pentatricopeptide repeat-containing protein At3g29230, PFAM = PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf06050_339731-344527' '(at4g14850 : 918.0) Encodes a pentatricopeptide (PPR) protein that binds single-stranded RNA. The N-terminal portion of the protein can localize to the mitochondria. Mutations in this gene make plants less sensitive to inhibitors of the MEP and MVA pathways of isoprenoid biosynthesis and increase the activity of HMG CoA reductase.; lovastatin insensitive 1 (LOI1); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G09950.1); Has 35457 Blast hits to 13266 proteins in 222 species: Archae - 0; Bacteria - 4; Metazoa - 55; Fungi - 21; Plants - 34914; Viruses - 0; Other Eukaryotes - 463 (source: NCBI BLink). & (reliability: 1836.0) & (original description: Putative LOI1, Description = Pentatricopeptide repeat-containing protein At4g14850, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf06084_55122-58324' '(at1g61870 : 454.0) pentatricopeptide repeat 336 (PPR336); LOCATED IN: mitochondrion, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G11630.1); Has 31000 Blast hits to 9550 proteins in 270 species: Archae - 4; Bacteria - 23; Metazoa - 297; Fungi - 351; Plants - 29494; Viruses - 0; Other Eukaryotes - 831 (source: NCBI BLink). & (q76c99|rf1_orysa : 107.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 908.0) & (original description: Putative PPR336, Description = Pentatricopeptide repeat-containing protein At1g61870, mitochondrial, PFAM = PF13812;PF13812;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf06093_19713-25411' '(at4g02750 : 551.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 145.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1102.0) & (original description: Putative BnaA06g03650D, Description = BnaA06g03650D protein, PFAM = PF12854;PF12854;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf06256_389382-393106' '(at4g22760 : 624.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT2G45350.1); Has 39267 Blast hits to 14026 proteins in 231 species: Archae - 0; Bacteria - 16; Metazoa - 78; Fungi - 106; Plants - 38487; Viruses - 0; Other Eukaryotes - 580 (source: NCBI BLink). & (q76c99|rf1_orysa : 110.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1248.0) & (original description: Putative DYW10, Description = BnaC01g21360D protein, PFAM = PF12854;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf06277_496794-500451' '(at3g42630 : 398.0) Pentatricopeptide repeat (PPR) superfamily protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G14190.1); Has 5690 Blast hits to 3414 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 5631; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (reliability: 796.0) & (original description: Putative At3g42630, Description = Pentatricopeptide repeat-containing protein At3g42630, PFAM = PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf06387_134500-138123' '(at1g66345 : 437.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G01110.1); Has 32626 Blast hits to 11011 proteins in 270 species: Archae - 3; Bacteria - 29; Metazoa - 476; Fungi - 329; Plants - 30874; Viruses - 0; Other Eukaryotes - 915 (source: NCBI BLink). & (q76c99|rf1_orysa : 147.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 874.0) & (original description: Putative , Description = , PFAM = PF13041;PF13041;PF01535;PF01535;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf06400_110828-115479' '(at1g71210 : 694.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G06920.1); Has 23089 Blast hits to 6463 proteins in 161 species: Archae - 1; Bacteria - 0; Metazoa - 25; Fungi - 48; Plants - 22668; Viruses - 0; Other Eukaryotes - 347 (source: NCBI BLink). & (q76c99|rf1_orysa : 159.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1388.0) & (original description: Putative At1g71210, Description = Pentatricopeptide repeat-containing protein At1g71210, PFAM = PF13812;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf06424_234136-237202' '(at2g22410 : 332.0) SLOW GROWTH 1 (SLO1); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 42589 Blast hits to 14346 proteins in 282 species: Archae - 0; Bacteria - 11; Metazoa - 210; Fungi - 265; Plants - 41374; Viruses - 0; Other Eukaryotes - 729 (source: NCBI BLink). & (reliability: 664.0) & (original description: Putative glysoja_014095, Description = Pentatricopeptide repeat-containing protein, chloroplastic, PFAM = PF13041;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf06525_18906-260444' '(at5g18390 : 585.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G65820.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 125.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1170.0) & (original description: Putative At5g18390, Description = Pentatricopeptide repeat-containing protein At5g18390, mitochondrial, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf06545_324647-328446' '(at1g26900 : 505.0) Pentatricopeptide repeat (PPR) superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 22 (TAIR:AT3G12770.1); Has 36640 Blast hits to 13575 proteins in 201 species: Archae - 0; Bacteria - 9; Metazoa - 54; Fungi - 45; Plants - 36058; Viruses - 0; Other Eukaryotes - 474 (source: NCBI BLink). & (reliability: 1010.0) & (original description: Putative PCMP-E54, Description = Pentatricopeptide repeat-containing protein At1g26900, mitochondrial, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf06662_230159-233958' '(at5g47460 : 480.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G09950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 92.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 960.0) & (original description: Putative PCMP-E103, Description = Putative pentatricopeptide repeat-containing protein At5g47460, PFAM = PF13041;PF13041;PF13041;PF12854;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf06677_187099-190585' '(at4g38150 : 236.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G03560.2); Has 35233 Blast hits to 8000 proteins in 207 species: Archae - 4; Bacteria - 10; Metazoa - 48; Fungi - 167; Plants - 34530; Viruses - 0; Other Eukaryotes - 474 (source: NCBI BLink). & (q76c99|rf1_orysa : 96.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 472.0) & (original description: Putative At4g38150, Description = Pentatricopeptide repeat-containing protein At4g38150, PFAM = PF01535;PF01535;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf06677_187128-190153' '(at4g38150 : 265.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G03560.2); Has 35233 Blast hits to 8000 proteins in 207 species: Archae - 4; Bacteria - 10; Metazoa - 48; Fungi - 167; Plants - 34530; Viruses - 0; Other Eukaryotes - 474 (source: NCBI BLink). & (q76c99|rf1_orysa : 98.6) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 530.0) & (original description: Putative At4g38150, Description = Pentatricopeptide repeat-containing protein At4g38150, PFAM = PF01535;PF01535;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf06737_55175-59975' '(at5g50280 : 789.0) embryo defective 1006 (EMB1006); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 184.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1578.0) & (original description: Putative EMB1006, Description = Pentatricopeptide repeat-containing protein At5g50280, chloroplastic, PFAM = PF01535;PF13812;PF13812;PF13812;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf06763_51278-55203' '(at3g48250 : 640.0) Pentatricopeptide repeat (PPR) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G02490.1); Has 21230 Blast hits to 7475 proteins in 220 species: Archae - 2; Bacteria - 3; Metazoa - 76; Fungi - 161; Plants - 20609; Viruses - 0; Other Eukaryotes - 379 (source: NCBI BLink). & (q76c99|rf1_orysa : 90.1) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1280.0) & (original description: Putative At3g48250, Description = Pentatricopeptide repeat-containing protein At3g48250, chloroplastic, PFAM = PF13041;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf06804_20125-22970' '(at1g04590 : 262.0) BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18975.4); Has 111 Blast hits to 111 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 524.0) & (original description: Putative T1G11.16, Description = EMB2748, PFAM = )' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf06823_270325-273963' '(at5g02860 : 1097.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G18940.1); Has 78068 Blast hits to 16233 proteins in 339 species: Archae - 4; Bacteria - 143; Metazoa - 1692; Fungi - 1544; Plants - 71427; Viruses - 0; Other Eukaryotes - 3258 (source: NCBI BLink). & (q76c99|rf1_orysa : 265.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2194.0) & (original description: Putative glysoja_047052, Description = Pentatricopeptide repeat-containing protein, PFAM = PF13812;PF13812;PF13812;PF13812;PF13812;PF12854;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf06848_1105782-1110444' '(at5g61990 : 97.8) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G59900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative PGSC0003DMG400013578, Description = , PFAM = PF01535;PF13812;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf06870_17297-21285' '(at2g22410 : 498.0) SLOW GROWTH 1 (SLO1); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 42589 Blast hits to 14346 proteins in 282 species: Archae - 0; Bacteria - 11; Metazoa - 210; Fungi - 265; Plants - 41374; Viruses - 0; Other Eukaryotes - 729 (source: NCBI BLink). & (q76c99|rf1_orysa : 96.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 996.0) & (original description: Putative PCMP-E28, Description = Pentatricopeptide repeat-containing protein At2g22410, mitochondrial, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf06884_22783-26399' '(at5g66520 : 429.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G06540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 88.2) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 858.0) & (original description: Putative MEF21, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf06998_131820-135589' '(at4g33170 : 372.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G09950.1); Has 55398 Blast hits to 13784 proteins in 253 species: Archae - 0; Bacteria - 15; Metazoa - 97; Fungi - 52; Plants - 54672; Viruses - 0; Other Eukaryotes - 562 (source: NCBI BLink). & (reliability: 744.0) & (original description: Putative , Description = , PFAM = PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf07008_236795-240597' '(at3g02650 : 442.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G62680.1); Has 34543 Blast hits to 12438 proteins in 283 species: Archae - 5; Bacteria - 31; Metazoa - 472; Fungi - 472; Plants - 32537; Viruses - 0; Other Eukaryotes - 1026 (source: NCBI BLink). & (q76c99|rf1_orysa : 116.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 884.0) & (original description: Putative At3g02650, Description = Pentatricopeptide repeat-containing protein At3g02650, mitochondrial, PFAM = PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf07026_66407-69840' '(at5g47360 : 322.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G12775.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 127.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 644.0) & (original description: Putative At5g47360, Description = Pentatricopeptide repeat-containing protein At5g47360, PFAM = PF12854;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf07172_60336-64276' '(at2g15690 : 511.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G32450.1); Has 33034 Blast hits to 15947 proteins in 677 species: Archae - 2; Bacteria - 822; Metazoa - 2903; Fungi - 1398; Plants - 25666; Viruses - 35; Other Eukaryotes - 2208 (source: NCBI BLink). & (reliability: 1022.0) & (original description: Putative At2g15690, Description = Putative pentatricopeptide repeat-containing protein-like, PFAM = PF01535;PF01535;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf07223_440495-444534' '(at1g08070 : 518.0) Encodes a chloroplast RNA editing factor.; ORGANELLE TRANSCRIPT PROCESSING 82 (OTP82); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 45065 Blast hits to 15003 proteins in 296 species: Archae - 0; Bacteria - 12; Metazoa - 221; Fungi - 219; Plants - 43815; Viruses - 0; Other Eukaryotes - 798 (source: NCBI BLink). & (q76c99|rf1_orysa : 81.6) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1036.0) & (original description: Putative otp82, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf07231_1014650-1018581' '(at1g74630 : 852.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 36912 Blast hits to 14171 proteins in 263 species: Archae - 0; Bacteria - 21; Metazoa - 80; Fungi - 95; Plants - 36068; Viruses - 0; Other Eukaryotes - 648 (source: NCBI BLink). & (q76c99|rf1_orysa : 88.2) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1704.0) & (original description: Putative LPA66, Description = Pentatricopeptide repeat (PPR) superfamily protein, PFAM = PF14432;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf07281_3011-8546' '(at3g06920 : 1350.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: fruit; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: proton gradient regulation 3 (TAIR:AT4G31850.1); Has 81615 Blast hits to 15733 proteins in 342 species: Archae - 9; Bacteria - 150; Metazoa - 1130; Fungi - 1463; Plants - 75788; Viruses - 0; Other Eukaryotes - 3075 (source: NCBI BLink). & (q76c99|rf1_orysa : 296.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2700.0) & (original description: Putative At3g06920, Description = Pentatricopeptide repeat-containing protein At3g06920, PFAM = PF01535;PF01535;PF01535;PF13812;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF12854;PF12854;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf07284_1600-5033' '(at4g01400 : 533.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has 40053 Blast hits to 12380 proteins in 263 species: Archae - 4; Bacteria - 27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses - 0; Other Eukaryotes - 935 (source: NCBI BLink). & (q76c99|rf1_orysa : 124.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1066.0) & (original description: Putative At4g01400, Description = Pentatricopeptide repeat-containing protein At4g01400, mitochondrial, PFAM = PF13041;PF13041;PF01535;PF01535;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf07327_96439-100289' '(at2g46050 : 483.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G68930.1); Has 38266 Blast hits to 13184 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 22; Fungi - 35; Plants - 37737; Viruses - 0; Other Eukaryotes - 472 (source: NCBI BLink). & (reliability: 966.0) & (original description: Putative At2g46050, Description = Pentatricopeptide repeat-containing protein At2g46050, mitochondrial, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf07381_218478-222055' '(at1g28690 : 634.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G14820.1); Has 38334 Blast hits to 13612 proteins in 253 species: Archae - 1; Bacteria - 23; Metazoa - 125; Fungi - 112; Plants - 37440; Viruses - 0; Other Eukaryotes - 633 (source: NCBI BLink). & (reliability: 1268.0) & (original description: Putative PCMP-E34, Description = Pentatricopeptide repeat-containing protein At1g28690, mitochondrial, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf07440_208403-212214' '(at2g13600 : 369.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 46660 Blast hits to 13875 proteins in 226 species: Archae - 0; Bacteria - 4; Metazoa - 74; Fungi - 58; Plants - 45878; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (q76c99|rf1_orysa : 108.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 738.0) & (original description: Putative , Description = , PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf07442_177260-183481' '(at2g31400 : 958.0) Encodes a a chloroplast-localized pentatricopeptide-repeat protein involved in regulation of nuclear gene expression.; genomes uncoupled 1 (GUN1); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 2 (TAIR:AT1G74850.1); Has 66090 Blast hits to 15992 proteins in 322 species: Archae - 5; Bacteria - 98; Metazoa - 1298; Fungi - 977; Plants - 60012; Viruses - 1; Other Eukaryotes - 3699 (source: NCBI BLink). & (q76c99|rf1_orysa : 193.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1916.0) & (original description: Putative PGSC0003DMG402007298, Description = Pentatricopeptide repeat-containing protein At2g31400, chloroplastic, PFAM = PF13812;PF13812;PF17177;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf07451_51093-55192' '(at3g18020 : 779.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: rna processing factor 2 (TAIR:AT1G62670.1); Has 37088 Blast hits to 10596 proteins in 228 species: Archae - 2; Bacteria - 22; Metazoa - 80; Fungi - 314; Plants - 35806; Viruses - 0; Other Eukaryotes - 864 (source: NCBI BLink). & (q76c99|rf1_orysa : 201.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1558.0) & (original description: Putative At3g18020, Description = Pentatricopeptide repeat-containing protein At3g18020, PFAM = PF13812;PF13041;PF13041;PF13041;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf07527_363718-367866' '(at1g03560 : 907.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G39710.1); Has 53521 Blast hits to 15193 proteins in 316 species: Archae - 3; Bacteria - 91; Metazoa - 613; Fungi - 824; Plants - 50230; Viruses - 0; Other Eukaryotes - 1760 (source: NCBI BLink). & (q76c99|rf1_orysa : 200.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1814.0) & (original description: Putative At1g03560, Description = Pentatricopeptide repeat-containing protein At1g03560, mitochondrial, PFAM = PF12854;PF13041;PF13041;PF13041;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf07695_153659-157552' '(at4g19440 : 692.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G55840.1). & (q76c99|rf1_orysa : 281.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1384.0) & (original description: Putative At4g19440, Description = Pentatricopeptide repeat-containing protein At4g19440, chloroplastic, PFAM = PF12854;PF12854;PF12854;PF01535;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf07722_51860-56127' '(at3g49710 : 942.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 44619 Blast hits to 14217 proteins in 272 species: Archae - 0; Bacteria - 17; Metazoa - 134; Fungi - 114; Plants - 43678; Viruses - 0; Other Eukaryotes - 676 (source: NCBI BLink). & (q76c99|rf1_orysa : 97.8) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1884.0) & (original description: Putative PCMP-H79, Description = Pentatricopeptide repeat-containing protein At3g49710, PFAM = PF13041;PF13041;PF13041;PF12854;PF14432;PF01535;PF01535;PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf07728_146636-150608' '(at3g20730 : 469.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G27610.1); Has 41688 Blast hits to 13542 proteins in 246 species: Archae - 0; Bacteria - 10; Metazoa - 149; Fungi - 146; Plants - 40815; Viruses - 0; Other Eukaryotes - 568 (source: NCBI BLink). & (q76c99|rf1_orysa : 86.3) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 938.0) & (original description: Putative At3g20730, Description = Pentatricopeptide repeat-containing protein At3g20730, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf07788_417806-421617' '(at3g01580 : 600.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G11290.1); Has 41472 Blast hits to 13221 proteins in 229 species: Archae - 0; Bacteria - 3; Metazoa - 37; Fungi - 79; Plants - 40856; Viruses - 0; Other Eukaryotes - 497 (source: NCBI BLink). & (q76c99|rf1_orysa : 99.4) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1200.0) & (original description: Putative glysoja_044728, Description = Putative pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf07793_344938-348602' '(at1g64310 : 560.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1); Has 36015 Blast hits to 13020 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 67; Fungi - 49; Plants - 35536; Viruses - 0; Other Eukaryotes - 363 (source: NCBI BLink). & (reliability: 1120.0) & (original description: Putative PCMP-E65, Description = Putative pentatricopeptide repeat-containing protein At1g64310, PFAM = PF13041;PF13041;PF13041;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf07797_203213-206895' '(at3g49730 : 217.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G65820.1); Has 44976 Blast hits to 14279 proteins in 285 species: Archae - 4; Bacteria - 30; Metazoa - 692; Fungi - 575; Plants - 42339; Viruses - 0; Other Eukaryotes - 1336 (source: NCBI BLink). & (q76c99|rf1_orysa : 139.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 434.0) & (original description: Putative At2g13420, Description = Pentatricopeptide repeat-containing protein At2g13420, mitochondrial, PFAM = PF01535;PF13041;PF13041;PF13041;PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf07825_779187-782956' '(at5g38730 : 678.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G05670.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 197.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1356.0) & (original description: Putative At5g38730, Description = Pentatricopeptide repeat-containing protein At5g38730, PFAM = PF01535;PF01535;PF12854;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf07829_70382-74832' '(at1g52620 : 770.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G74580.1); Has 57261 Blast hits to 14054 proteins in 301 species: Archae - 5; Bacteria - 49; Metazoa - 836; Fungi - 993; Plants - 53641; Viruses - 0; Other Eukaryotes - 1737 (source: NCBI BLink). & (q76c99|rf1_orysa : 256.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1540.0) & (original description: Putative glysoja_024967, Description = Signal peptidase I, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf07841_334943-338880' '(at3g14330 : 782.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G46790.1); Has 35559 Blast hits to 14091 proteins in 265 species: Archae - 0; Bacteria - 6; Metazoa - 58; Fungi - 108; Plants - 34937; Viruses - 0; Other Eukaryotes - 450 (source: NCBI BLink). & (q76c99|rf1_orysa : 93.6) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1564.0) & (original description: Putative PCMP-H57, Description = Pentatricopeptide repeat-containing protein At3g14330, PFAM = PF14432;PF13041;PF13041;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf07939_139977-143806' '(at4g31070 : 520.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G33990.1); Has 38861 Blast hits to 13091 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 105; Fungi - 61; Plants - 38225; Viruses - 0; Other Eukaryotes - 470 (source: NCBI BLink). & (reliability: 1040.0) & (original description: Putative PCMP-E7, Description = Pentatricopeptide repeat-containing protein At4g31070, mitochondrial, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf08194_297245-298782' '(at2g27610 : 151.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 54594 Blast hits to 14874 proteins in 305 species: Archae - 2; Bacteria - 30; Metazoa - 158; Fungi - 263; Plants - 53396; Viruses - 0; Other Eukaryotes - 745 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative OTP81, Description = Pentatricopeptide repeat-containing protein, PFAM = PF14432;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf08195_627308-632603' '(at5g57250 : 687.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G59900.1); Has 71706 Blast hits to 14592 proteins in 301 species: Archae - 6; Bacteria - 54; Metazoa - 648; Fungi - 890; Plants - 68117; Viruses - 0; Other Eukaryotes - 1991 (source: NCBI BLink). & (q76c99|rf1_orysa : 181.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1374.0) & (original description: Putative , Description = , PFAM = PF13041;PF13041;PF13041;PF13041;PF13041;PF12854;PF12854;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf08430_86308-90737' '(at5g12100 : 742.0) pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G65560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 260.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1484.0) & (original description: Putative At5g12100, Description = Pentatricopeptide repeat-containing protein At5g12100, mitochondrial, PFAM = PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF12854;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf08465_312362-316110' '(at3g61360 : 531.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G02420.1); Has 25235 Blast hits to 10240 proteins in 263 species: Archae - 1; Bacteria - 29; Metazoa - 217; Fungi - 376; Plants - 23987; Viruses - 0; Other Eukaryotes - 625 (source: NCBI BLink). & (q76c99|rf1_orysa : 104.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1062.0) & (original description: Putative At3g61360, Description = Pentatricopeptide repeat-containing protein At3g61360, PFAM = PF13041;PF12854;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf08466_179029-182747' '(at3g22670 : 438.0) Pentatricopeptide repeat (PPR) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04130.2); Has 39777 Blast hits to 13686 proteins in 296 species: Archae - 5; Bacteria - 61; Metazoa - 326; Fungi - 524; Plants - 37538; Viruses - 0; Other Eukaryotes - 1323 (source: NCBI BLink). & (q76c99|rf1_orysa : 139.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 876.0) & (original description: Putative At3g22670, Description = Pentatricopeptide repeat-containing protein At3g22670, mitochondrial, PFAM = PF12854;PF01535;PF01535;PF01535;PF13041;PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf08488_72581-76301' '(at5g15010 : 591.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G80880.1); Has 37863 Blast hits to 13191 proteins in 288 species: Archae - 3; Bacteria - 35; Metazoa - 443; Fungi - 342; Plants - 35932; Viruses - 0; Other Eukaryotes - 1108 (source: NCBI BLink). & (q76c99|rf1_orysa : 115.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1182.0) & (original description: Putative At5g15010, Description = Pentatricopeptide repeat-containing protein At5g15010, mitochondrial, PFAM = PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf08590_424482-430049' '(at2g13600 : 464.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 46660 Blast hits to 13875 proteins in 226 species: Archae - 0; Bacteria - 4; Metazoa - 74; Fungi - 58; Plants - 45878; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (q76c99|rf1_orysa : 116.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 928.0) & (original description: Putative , Description = , PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf08673_1838-5226' '(at1g53330 : 391.0) encodes a member of the pentatricopeptide repeat (PPR) gene family. T-DNA insertion mutants had a complex phenotypic expression, ranging from embryo lethal to seedling lethal, to just subtle changes.; Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: rna processing factor 2 (TAIR:AT1G62670.1); Has 42827 Blast hits to 13568 proteins in 292 species: Archae - 4; Bacteria - 35; Metazoa - 401; Fungi - 615; Plants - 40434; Viruses - 0; Other Eukaryotes - 1338 (source: NCBI BLink). & (q76c99|rf1_orysa : 129.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 782.0) & (original description: Putative At1g53330, Description = Putative pentatricopeptide repeat-containing protein At1g53330, PFAM = PF13041;PF13041;PF13041;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf08704_360121-363851' '(at4g21065 : 479.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G33170.1); Has 42394 Blast hits to 14278 proteins in 275 species: Archae - 0; Bacteria - 13; Metazoa - 126; Fungi - 79; Plants - 41597; Viruses - 0; Other Eukaryotes - 579 (source: NCBI BLink). & (q76c99|rf1_orysa : 88.2) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 958.0) & (original description: Putative Sb01g003150, Description = Putative uncharacterized protein Sb01g003150, PFAM = PF01535;PF01535;PF01535;PF01535;PF14432;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf08755_352570-357236' '(at3g57430 : 1132.0) Encodes a chloroplast RNA editing factor.; ORGANELLE TRANSCRIPT PROCESSING 84 (OTP84); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G11290.1); Has 46517 Blast hits to 13331 proteins in 240 species: Archae - 0; Bacteria - 7; Metazoa - 55; Fungi - 91; Plants - 45789; Viruses - 0; Other Eukaryotes - 575 (source: NCBI BLink). & (q76c99|rf1_orysa : 107.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2264.0) & (original description: Putative OTP84, Description = Os04g0118700 protein, PFAM = PF14432;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf08872_8117-12327' '(at5g64320 : 204.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G74580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 136.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 408.0) & (original description: Putative , Description = , PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf08918_189502-194045' '(at4g20740 : 826.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G06710.1); Has 37034 Blast hits to 11477 proteins in 267 species: Archae - 10; Bacteria - 18; Metazoa - 245; Fungi - 473; Plants - 35231; Viruses - 0; Other Eukaryotes - 1057 (source: NCBI BLink). & (q76c99|rf1_orysa : 148.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1652.0) & (original description: Putative At4g20740, Description = Pentatricopeptide repeat-containing protein At4g20740, PFAM = PF12854;PF12854;PF01535;PF01535;PF01535;PF13041;PF17177)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf08937_88074-92155' '(at1g15510 : 1090.0) Encodes a pentatricopeptide repeat protein required for chloroplast transcript accD RNA editing and early chloroplast biogenesis.; EARLY CHLOROPLAST BIOGENESIS2 (ECB2); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1); Has 49765 Blast hits to 13993 proteins in 266 species: Archae - 0; Bacteria - 6; Metazoa - 64; Fungi - 140; Plants - 48782; Viruses - 0; Other Eukaryotes - 773 (source: NCBI BLink). & (q76c99|rf1_orysa : 108.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2180.0) & (original description: Putative PCMP-H73, Description = Pentatricopeptide repeat-containing protein At1g15510, chloroplastic, PFAM = PF01535;PF01535;PF14432;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf08942_47595-51232' '(at2g06000 : 474.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G09900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q76c99|rf1_orysa : 182.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 948.0) & (original description: Putative At2g06000, Description = Pentatricopeptide repeat-containing protein At2g06000, PFAM = PF13041;PF13041;PF13041;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf08984_297240-301128' '(at1g50270 : 534.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT2G13600.1); Has 37475 Blast hits to 13706 proteins in 234 species: Archae - 0; Bacteria - 8; Metazoa - 62; Fungi - 67; Plants - 36828; Viruses - 0; Other Eukaryotes - 510 (source: NCBI BLink). & (q76c99|rf1_orysa : 103.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1068.0) & (original description: Putative otp82, Description = Pentatricopeptide repeat-containing protein At1g50270, PFAM = PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf09082_125962-129341' '(at5g46680 : 447.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G09900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 186.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 894.0) & (original description: Putative At5g46680, Description = Pentatricopeptide repeat-containing protein At5g46680, PFAM = PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF12854;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf09100_200443-203999' '(at4g26680 : 635.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G05670.2). & (q76c99|rf1_orysa : 155.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1270.0) & (original description: Putative At4g26680, Description = Pentatricopeptide repeat-containing protein At4g26680, mitochondrial, PFAM = PF13041;PF13041;PF01535;PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf09127_60541-64442' '(at3g05340 : 731.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G25970.1); Has 36706 Blast hits to 13004 proteins in 235 species: Archae - 0; Bacteria - 2; Metazoa - 52; Fungi - 64; Plants - 36145; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink). & (q76c99|rf1_orysa : 98.6) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1462.0) & (original description: Putative PCMP-E83, Description = Pentatricopeptide repeat-containing protein At3g05340, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf09248_294541-298064' '(at2g38420 : 309.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G63130.1); Has 26299 Blast hits to 8886 proteins in 261 species: Archae - 3; Bacteria - 26; Metazoa - 362; Fungi - 517; Plants - 24480; Viruses - 0; Other Eukaryotes - 911 (source: NCBI BLink). & (q76c99|rf1_orysa : 131.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 618.0) & (original description: Putative , Description = , PFAM = PF13812;PF01535;PF01535;PF12854;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf09248_295108-298100' '(at2g38420 : 198.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G63130.1); Has 26299 Blast hits to 8886 proteins in 261 species: Archae - 3; Bacteria - 26; Metazoa - 362; Fungi - 517; Plants - 24480; Viruses - 0; Other Eukaryotes - 911 (source: NCBI BLink). & (q76c99|rf1_orysa : 126.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 396.0) & (original description: Putative , Description = , PFAM = PF13041;PF13812;PF12854;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf09360_73771-78863' '(at1g16480 : 1100.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1). & (q76c99|rf1_orysa : 100.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2200.0) & (original description: Putative F3O9.28, Description = >F3O9.28, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF14432;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf09427_205285-209705' '(at1g79540 : 771.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: rna processing factor 2 (TAIR:AT1G62670.1); Has 52662 Blast hits to 14102 proteins in 281 species: Archae - 4; Bacteria - 51; Metazoa - 515; Fungi - 799; Plants - 49672; Viruses - 0; Other Eukaryotes - 1621 (source: NCBI BLink). & (q76c99|rf1_orysa : 265.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1542.0) & (original description: Putative At1g79540, Description = Pentatricopeptide repeat-containing protein At1g79540, PFAM = PF12854;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf09442_151633-155057' '(at2g17670 : 529.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G53700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q76c99|rf1_orysa : 163.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1058.0) & (original description: Putative At2g17670, Description = Pentatricopeptide repeat-containing protein At2g17670, PFAM = PF12854;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf09467_289279-293363' '(at3g26540 : 786.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21300.1); Has 45842 Blast hits to 12891 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 71; Plants - 45205; Viruses - 0; Other Eukaryotes - 485 (source: NCBI BLink). & (q76c99|rf1_orysa : 89.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1572.0) & (original description: Putative PCMP-A5, Description = Pentatricopeptide repeat-containing protein At3g26540, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf09554_81298-85320' '(at5g39350 : 720.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: shoot apex, embryo, sperm cell, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1); Has 45149 Blast hits to 14161 proteins in 247 species: Archae - 1; Bacteria - 11; Metazoa - 167; Fungi - 118; Plants - 44194; Viruses - 0; Other Eukaryotes - 658 (source: NCBI BLink). & (q76c99|rf1_orysa : 112.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1440.0) & (original description: Putative PCMP-E16, Description = Pentatricopeptide repeat-containing protein At5g39350, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf09554_210626-214882' '(at3g29290 : 457.0) embryo defective 2076 (emb2076); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has 34767 Blast hits to 12132 proteins in 265 species: Archae - 2; Bacteria - 30; Metazoa - 249; Fungi - 365; Plants - 32849; Viruses - 0; Other Eukaryotes - 1272 (source: NCBI BLink). & (q76c99|rf1_orysa : 109.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 914.0) & (original description: Putative EMB2076, Description = Pentatricopeptide repeat-containing protein At3g29290, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf09590_359973-364297' '(at1g62390 : 769.0) Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein (TAIR:AT2G25290.3); Has 5282 Blast hits to 4636 proteins in 331 species: Archae - 11; Bacteria - 234; Metazoa - 2213; Fungi - 870; Plants - 1167; Viruses - 2; Other Eukaryotes - 785 (source: NCBI BLink). & (gnl|cdd|39354 : 443.0) no description available & (reliability: 1538.0) & (original description: Putative Phox2, Description = Heat shock protein 70 (HSP70)-interacting protein, putative, PFAM = PF00564)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf09928_2269-6802' '(at1g80880 : 482.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G15010.1); Has 26859 Blast hits to 9675 proteins in 280 species: Archae - 3; Bacteria - 25; Metazoa - 333; Fungi - 256; Plants - 25481; Viruses - 0; Other Eukaryotes - 761 (source: NCBI BLink). & (q76c99|rf1_orysa : 101.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 964.0) & (original description: Putative At1g80880, Description = Pentatricopeptide repeat-containing protein At1g80880, mitochondrial, PFAM = PF01535;PF01535;PF01535;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf10043_4209-8253' '(at2g41080 : 761.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 35775 Blast hits to 12998 proteins in 218 species: Archae - 0; Bacteria - 5; Metazoa - 12; Fungi - 37; Plants - 35395; Viruses - 0; Other Eukaryotes - 326 (source: NCBI BLink). & (q76c99|rf1_orysa : 97.8) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1522.0) & (original description: Putative otp82, Description = Pentatricopeptide repeat-containing protein, PFAM = PF14432;PF13041;PF13041;PF13041;PF01535;PF01535;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf10314_515411-519159' '(at1g08610 : 540.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G09900.1); Has 46651 Blast hits to 12655 proteins in 271 species: Archae - 5; Bacteria - 25; Metazoa - 357; Fungi - 448; Plants - 44319; Viruses - 0; Other Eukaryotes - 1497 (source: NCBI BLink). & (q76c99|rf1_orysa : 213.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1080.0) & (original description: Putative At1g08610, Description = Pentatricopeptide repeat-containing protein At1g08610, PFAM = PF13041;PF13041;PF13041;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf10322_279219-283333' '(at2g25580 : 452.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G32450.1); Has 21306 Blast hits to 10572 proteins in 176 species: Archae - 0; Bacteria - 9; Metazoa - 6; Fungi - 21; Plants - 21172; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 904.0) & (original description: Putative T31E10, Description = PPR containing plant-like protein, PFAM = PF14432;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf10342_171046-176817' '(at1g66345 : 440.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G01110.1); Has 32626 Blast hits to 11011 proteins in 270 species: Archae - 3; Bacteria - 29; Metazoa - 476; Fungi - 329; Plants - 30874; Viruses - 0; Other Eukaryotes - 915 (source: NCBI BLink). & (q76c99|rf1_orysa : 144.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 880.0) & (original description: Putative , Description = , PFAM = PF01535;PF01535;PF12854;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf10368_63346-67157' '(at5g18950 : 377.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: rna processing factor 2 (TAIR:AT1G62670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 197.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 754.0) & (original description: Putative At5g18950, Description = Pentatricopeptide repeat-containing protein At5g18950, PFAM = PF13041;PF13041;PF12854;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf10579_98375-102063' '(at2g29760 : 355.0) Encodes a chloroplast RNA editing factor.; ORGANELLE TRANSCRIPT PROCESSING 81 (OTP81); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G08070.1); Has 39055 Blast hits to 14294 proteins in 286 species: Archae - 1; Bacteria - 14; Metazoa - 160; Fungi - 158; Plants - 37962; Viruses - 2; Other Eukaryotes - 758 (source: NCBI BLink). & (q76c99|rf1_orysa : 82.8) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 710.0) & (original description: Putative ZOSMA_76G00260, Description = Pentatricopeptide repeat-containing protein, PFAM = PF13041;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf10820_112674-116527' '(at2g02750 : 589.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT2G13600.1); Has 42683 Blast hits to 13925 proteins in 241 species: Archae - 0; Bacteria - 4; Metazoa - 114; Fungi - 172; Plants - 41670; Viruses - 0; Other Eukaryotes - 723 (source: NCBI BLink). & (q76c99|rf1_orysa : 108.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1178.0) & (original description: Putative At2g02750, Description = Pentatricopeptide repeat-containing protein At2g02750, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf11103_136227-139939' '(at5g56310 : 484.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 21 (TAIR:AT2G20540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 87.8) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 968.0) & (original description: Putative MEF21, Description = BnaC07g16710D protein, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf11182_223544-227190' '(at1g13410 : 554.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G02750.1); Has 37390 Blast hits to 13439 proteins in 200 species: Archae - 0; Bacteria - 4; Metazoa - 27; Fungi - 54; Plants - 36888; Viruses - 0; Other Eukaryotes - 417 (source: NCBI BLink). & (q76c99|rf1_orysa : 99.4) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1108.0) & (original description: Putative BnaA08g24280D, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf11264_245291-249479' '(at3g15130 : 801.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 42839 Blast hits to 13577 proteins in 243 species: Archae - 0; Bacteria - 0; Metazoa - 52; Fungi - 90; Plants - 42162; Viruses - 0; Other Eukaryotes - 535 (source: NCBI BLink). & (q76c99|rf1_orysa : 86.3) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1602.0) & (original description: Putative BnaA03g33750D, Description = BnaA03g33750D protein, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf11331_1-2770' '(at5g60960 : 545.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G61370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 97.4) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1090.0) & (original description: Putative PNM1, Description = Pentatricopeptide repeat-containing protein PNM1, mitochondrial, PFAM = PF13812;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf11380_395981-413256' '(at1g02910 : 594.0) Mutants defective in this gene were shown to have a reduced PSII content (overall reduction in the levels of several PSII subunits) and a disrupted grana stack structure. The N-terminal half of the protein contains two tetratricopeptide repeat (TPR) motifs that are arranged tandemly, each consisting of a 34-residue degenerate consensus sequence. The N-terminal sequence is rich in positive and hydroxylated amino acid residues.; LOW PSII ACCUMULATION1 (LPA1); FUNCTIONS IN: binding; INVOLVED IN: photosystem II oxygen evolving complex assembly; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3493 (InterPro:IPR021883), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28740.1); Has 201 Blast hits to 200 proteins in 49 species: Archae - 3; Bacteria - 57; Metazoa - 0; Fungi - 0; Plants - 127; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 1188.0) & (original description: Putative LPA1, Description = Protein LOW PSII ACCUMULATION 1, chloroplastic, PFAM = PF11998)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf11480_371194-375017' '(at1g09820 : 590.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G39710.1); Has 57260 Blast hits to 15041 proteins in 306 species: Archae - 1; Bacteria - 71; Metazoa - 917; Fungi - 972; Plants - 53378; Viruses - 0; Other Eukaryotes - 1921 (source: NCBI BLink). & (q76c99|rf1_orysa : 227.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1180.0) & (original description: Putative At1g09820, Description = Pentatricopeptide repeat-containing protein At1g09820, PFAM = PF13041;PF13041;PF13041;PF13041;PF13041;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf11552_344206-347642' '(at5g46100 : 607.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G64320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 215.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1214.0) & (original description: Putative At5g46100, Description = Pentatricopeptide repeat-containing protein At5g46100, PFAM = PF12854;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf11581_222143-226665' '(at1g31840 : 660.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G39710.1). & (q76c99|rf1_orysa : 303.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1320.0) & (original description: Putative At1g31840, Description = Putative pentatricopeptide repeat-containing protein At1g31840, PFAM = PF12854;PF12854;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf11744_14753-18405' '(at1g64310 : 532.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1); Has 36015 Blast hits to 13020 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 67; Fungi - 49; Plants - 35536; Viruses - 0; Other Eukaryotes - 363 (source: NCBI BLink). & (reliability: 1064.0) & (original description: Putative At1g64310, Description = Putative pentatricopeptide repeat-containing protein At1g64310, PFAM = PF13041;PF13041;PF13041;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf11831_58057-62282' '(at3g13770 : 666.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 37890 Blast hits to 13461 proteins in 236 species: Archae - 0; Bacteria - 8; Metazoa - 36; Fungi - 51; Plants - 37361; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink). & (q76c99|rf1_orysa : 86.3) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1332.0) & (original description: Putative At3g13770, Description = Pentatricopeptide repeat-containing protein, PFAM = PF13041;PF13041;PF13041;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf12045_582747-586822' '(at3g62470 : 729.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G62540.1); Has 39079 Blast hits to 12185 proteins in 290 species: Archae - 4; Bacteria - 32; Metazoa - 449; Fungi - 607; Plants - 36694; Viruses - 0; Other Eukaryotes - 1293 (source: NCBI BLink). & (q76c99|rf1_orysa : 127.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1458.0) & (original description: Putative At3g62470, Description = Pentatricopeptide repeat-containing protein At3g62470, mitochondrial, PFAM = PF13041;PF13041;PF12854;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf12148_71612-75606' '(at5g40400 : 590.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G55840.1); Has 45179 Blast hits to 13990 proteins in 287 species: Archae - 4; Bacteria - 20; Metazoa - 378; Fungi - 562; Plants - 43035; Viruses - 0; Other Eukaryotes - 1180 (source: NCBI BLink). & (q76c99|rf1_orysa : 195.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1180.0) & (original description: Putative , Description = , PFAM = PF13041;PF13041;PF13041;PF13041;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf12205_225144-230061' '(at4g18975 : 289.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G21190.1). & (reliability: 578.0) & (original description: Putative At4g18975, Description = Pentatricopeptide repeat-containing protein At4g18975, chloroplastic, PFAM = )' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf12205_287810-293096' '(at5g57250 : 648.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G59900.1); Has 71706 Blast hits to 14592 proteins in 301 species: Archae - 6; Bacteria - 54; Metazoa - 648; Fungi - 890; Plants - 68117; Viruses - 0; Other Eukaryotes - 1991 (source: NCBI BLink). & (q76c99|rf1_orysa : 184.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1296.0) & (original description: Putative , Description = , PFAM = PF12854;PF12854;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf12210_138814-144389' '(at5g55740 : 950.0) Encodes a member of the E+ subgroup of the PPR protein family, containing the E and E+ motifs following a tandem array of PPR motifs. It also contains an unknown motif consisting of 15 aa, which is highly conserved in some PPR proteins, including CRR4. CRR21 is involved in RNA editing of the site 2 of ndhD (ndhD-2),which encodes a subunit of the NDH complex. The RNA editing changes aa 128 from Ser to Leu. Mutants have impaired NDH complex activity.; chlororespiratory reduction 21 (CRR21); INVOLVED IN: mRNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 125.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1900.0) & (original description: Putative CRR21, Description = Pentatricopeptide repeat-containing protein At5g55740, chloroplastic, PFAM = PF13041;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf12427_92275-95699' '(at2g17670 : 514.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G53700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q76c99|rf1_orysa : 160.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1028.0) & (original description: Putative At2g17670, Description = Pentatricopeptide repeat-containing protein At2g17670, PFAM = PF12854;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf12469_135889-141710' '(at5g43820 : 605.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G15010.1); Has 33976 Blast hits to 11353 proteins in 260 species: Archae - 0; Bacteria - 8; Metazoa - 169; Fungi - 383; Plants - 32575; Viruses - 0; Other Eukaryotes - 841 (source: NCBI BLink). & (q76c99|rf1_orysa : 122.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1210.0) & (original description: Putative At5g43820, Description = Putative pentatricopeptide repeat-containing protein At5g43820, PFAM = PF13041;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf12848_30000-33910' '(at3g14730 : 665.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 39287 Blast hits to 13376 proteins in 233 species: Archae - 0; Bacteria - 3; Metazoa - 52; Fungi - 106; Plants - 38683; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink). & (q76c99|rf1_orysa : 98.6) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1330.0) & (original description: Putative PCMP-E31, Description = Pentatricopeptide repeat-containing protein At3g14730, PFAM = PF01535;PF01535;PF01535;PF01535;PF14432;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf12858_151732-154540' '(at3g21470 : 509.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G29230.1); Has 44286 Blast hits to 14135 proteins in 254 species: Archae - 0; Bacteria - 16; Metazoa - 240; Fungi - 183; Plants - 43075; Viruses - 0; Other Eukaryotes - 772 (source: NCBI BLink). & (q76c99|rf1_orysa : 122.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1018.0) & (original description: Putative PCMP-E29, Description = Pentatricopeptide repeat-containing protein At3g21470, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf12922_61556-66084' '(at5g55840 : 305.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G59900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 274.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 610.0) & (original description: Putative , Description = , PFAM = PF12854;PF12854;PF12854;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf12928_222980-231790' '(at1g73400 : 652.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G62470.1); Has 32572 Blast hits to 10552 proteins in 258 species: Archae - 4; Bacteria - 9; Metazoa - 159; Fungi - 256; Plants - 31316; Viruses - 0; Other Eukaryotes - 828 (source: NCBI BLink). & (q76c99|rf1_orysa : 127.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1304.0) & (original description: Putative At1g73400, Description = Pentatricopeptide repeat-containing protein At1g73400, mitochondrial, PFAM = PF13812;PF12854;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf13029_306914-311007' '(at3g53360 : 464.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G39530.1); Has 50551 Blast hits to 14033 proteins in 266 species: Archae - 0; Bacteria - 13; Metazoa - 180; Fungi - 93; Plants - 49461; Viruses - 0; Other Eukaryotes - 804 (source: NCBI BLink). & (q76c99|rf1_orysa : 118.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 928.0) & (original description: Putative , Description = , PFAM = PF01535;PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf13164_257276-261396' '(at3g16890 : 701.0) Encodes a mitochondrial pentatricopeptide repeat (PPR) domain protein, PPR40, which provides a signalling link between mitochondrial electron transport and regulation of stress and hormonal responses. Mutations in PPR40 result in enhanced sensitivity to salt, ABA and oxidative stress, as well as reduced electron transport through Complex III (cytochrome c reductase).; pentatricopeptide (PPR) domain protein 40 (PPR40); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G39710.1); Has 55842 Blast hits to 14078 proteins in 304 species: Archae - 4; Bacteria - 51; Metazoa - 561; Fungi - 1019; Plants - 52283; Viruses - 0; Other Eukaryotes - 1924 (source: NCBI BLink). & (q76c99|rf1_orysa : 233.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1402.0) & (original description: Putative PPR40, Description = Protein PENTATRICOPEPTIDE REPEAT 40, PFAM = PF01535;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf13229_313752-319216' '(at1g06710 : 1120.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G06920.1); Has 67223 Blast hits to 14860 proteins in 308 species: Archae - 6; Bacteria - 56; Metazoa - 772; Fungi - 1057; Plants - 62952; Viruses - 0; Other Eukaryotes - 2380 (source: NCBI BLink). & (q76c99|rf1_orysa : 253.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2240.0) & (original description: Putative ZOSMA_1G01310, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF13812;PF13812;PF12854;PF12854;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf13361_26834-30876' '(at3g18840 : 651.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT2G13600.1); Has 42936 Blast hits to 13106 proteins in 190 species: Archae - 0; Bacteria - 3; Metazoa - 51; Fungi - 30; Plants - 42456; Viruses - 0; Other Eukaryotes - 396 (source: NCBI BLink). & (q76c99|rf1_orysa : 95.9) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1302.0) & (original description: Putative PCMP-E92, Description = Putative pentatricopeptide repeat-containing protein At3g18840, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf13411_50995-62850' '(at3g59040 : 725.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q76c99|rf1_orysa : 153.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1450.0) & (original description: Putative At3g59040, Description = Pentatricopeptide repeat-containing protein At3g59040, PFAM = PF13041;PF13041;PF13041;PF13041;PF13041;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf13411_55888-61640' '(at3g59040 : 265.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 530.0) & (original description: Putative At3g59040, Description = Pentatricopeptide repeat-containing protein At3g59040, PFAM = PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf13523_31217-36088' '(at4g01400 : 1005.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has 40053 Blast hits to 12380 proteins in 263 species: Archae - 4; Bacteria - 27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses - 0; Other Eukaryotes - 935 (source: NCBI BLink). & (gnl|cdd|35633 : 658.0) no description available & (gnl|cdd|87493 : 234.0) no description available & (reliability: 2010.0) & (original description: Putative COG4, Description = Conserved oligomeric Golgi complex subunit 4, PFAM = PF04437;PF08318)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf13622_186352-190745' '(at1g62390 : 788.0) Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein (TAIR:AT2G25290.3); Has 5282 Blast hits to 4636 proteins in 331 species: Archae - 11; Bacteria - 234; Metazoa - 2213; Fungi - 870; Plants - 1167; Viruses - 2; Other Eukaryotes - 785 (source: NCBI BLink). & (gnl|cdd|39354 : 467.0) no description available & (reliability: 1576.0) & (original description: Putative At1g62390, Description = Carboxylate clamp-tetratricopeptide repeat protein, PFAM = PF00564)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf13643_25103-29067' '(at1g11710 : 604.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G01110.1); Has 45515 Blast hits to 13277 proteins in 292 species: Archae - 2; Bacteria - 53; Metazoa - 430; Fungi - 426; Plants - 43316; Viruses - 0; Other Eukaryotes - 1288 (source: NCBI BLink). & (q76c99|rf1_orysa : 228.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1208.0) & (original description: Putative At1g11710, Description = Pentatricopeptide repeat-containing protein At1g11710, mitochondrial, PFAM = PF13812;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf13776_335181-338544' '(at1g71060 : 600.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G77360.1); Has 34236 Blast hits to 11484 proteins in 290 species: Archae - 3; Bacteria - 45; Metazoa - 348; Fungi - 482; Plants - 32361; Viruses - 0; Other Eukaryotes - 997 (source: NCBI BLink). & (q76c99|rf1_orysa : 139.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1200.0) & (original description: Putative At1g71060, Description = Pentatricopeptide repeat-containing protein At1g71060, mitochondrial, PFAM = PF13041;PF13041;PF12854;PF12854;PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf14041_114080-117975' '(at5g15340 : 728.0) Pentatricopeptide repeat (PPR) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 30617 Blast hits to 12777 proteins in 204 species: Archae - 0; Bacteria - 4; Metazoa - 33; Fungi - 16; Plants - 30223; Viruses - 0; Other Eukaryotes - 341 (source: NCBI BLink). & (reliability: 1456.0) & (original description: Putative OTP81, Description = Pentatricopeptide repeat-containing family protein, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF14432;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf14436_54864-59427' '(at2g40720 : 851.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21300.1); Has 52244 Blast hits to 13768 proteins in 266 species: Archae - 0; Bacteria - 9; Metazoa - 106; Fungi - 105; Plants - 51420; Viruses - 0; Other Eukaryotes - 604 (source: NCBI BLink). & (q76c99|rf1_orysa : 105.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1702.0) & (original description: Putative PCMP-E26, Description = Pentatricopeptide repeat-containing protein At2g40720, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf14566_97074-101446' '(at4g30700 : 951.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G33990.1); Has 41014 Blast hits to 14356 proteins in 276 species: Archae - 0; Bacteria - 8; Metazoa - 149; Fungi - 107; Plants - 40176; Viruses - 0; Other Eukaryotes - 574 (source: NCBI BLink). & (q76c99|rf1_orysa : 118.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1902.0) & (original description: Putative DYW9, Description = Pentatricopeptide repeat-containing protein At4g30700, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF14432;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf14594_32898-38074' '(at5g66631 : 607.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G53700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1214.0) & (original description: Putative At5g66631, Description = Pentatricopeptide repeat-containing protein At5g66631, PFAM = PF01535;PF12854;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf14845_36845-40809' '(at1g69290 : 742.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G68980.1); Has 11641 Blast hits to 5218 proteins in 154 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 47; Plants - 11427; Viruses - 0; Other Eukaryotes - 149 (source: NCBI BLink). & (reliability: 1484.0) & (original description: Putative At1g69290, Description = Pentatricopeptide repeat-containing protein At1g69290, PFAM = PF13041;PF17177)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf14922_125544-129380' '(at5g08510 : 600.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G44230.1); Has 37926 Blast hits to 14003 proteins in 252 species: Archae - 2; Bacteria - 4; Metazoa - 48; Fungi - 107; Plants - 37187; Viruses - 0; Other Eukaryotes - 578 (source: NCBI BLink). & (q76c99|rf1_orysa : 104.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1200.0) & (original description: Putative PCMP-E20, Description = Pentatricopeptide repeat-containing protein At5g08510, PFAM = PF12854;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf14929_86528-90102' '(at2g42920 : 587.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G48910.1); Has 37919 Blast hits to 14277 proteins in 266 species: Archae - 0; Bacteria - 16; Metazoa - 156; Fungi - 107; Plants - 36994; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (q76c99|rf1_orysa : 108.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1174.0) & (original description: Putative LPA66, Description = Pentatricopeptide repeat (PPR) superfamily protein, PFAM = PF13041;PF01535;PF01535;PF01535;PF01535;PF01535;PF13812)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf15227_81893-86421' '(at5g55840 : 299.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G59900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 276.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 598.0) & (original description: Putative , Description = , PFAM = PF12854;PF12854;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf15653_257064-261577' '(at3g22150 : 943.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 48288 Blast hits to 14244 proteins in 270 species: Archae - 2; Bacteria - 15; Metazoa - 107; Fungi - 102; Plants - 47393; Viruses - 0; Other Eukaryotes - 669 (source: NCBI BLink). & (q76c99|rf1_orysa : 94.4) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1886.0) & (original description: Putative PCMP-E95, Description = Pentatricopeptide repeat-containing protein At3g22150, chloroplastic, PFAM = PF13041;PF13041;PF13041;PF13041;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf16329_98537-103716' '(at5g09950 : 1148.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G16480.1); Has 58090 Blast hits to 13690 proteins in 227 species: Archae - 0; Bacteria - 7; Metazoa - 25; Fungi - 46; Plants - 57493; Viruses - 0; Other Eukaryotes - 519 (source: NCBI BLink). & (q76c99|rf1_orysa : 82.8) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 2296.0) & (original description: Putative Sb03g026520, Description = Putative uncharacterized protein Sb03g026520, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf16768_120075-123661' '(at3g49142 : 332.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G33990.1). & (q76c99|rf1_orysa : 128.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 654.0) & (original description: Putative glysoja_000391, Description = Pentatricopeptide repeat-containing protein, mitochondrial, PFAM = PF17177;PF13041;PF13041;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf16937_2819-7104' '(at4g13650 : 456.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G16480.1); Has 61118 Blast hits to 14026 proteins in 284 species: Archae - 2; Bacteria - 18; Metazoa - 154; Fungi - 167; Plants - 59907; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (q76c99|rf1_orysa : 92.8) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 912.0) & (original description: Putative PGSC0003DMG400044401, Description = Tetratricopeptide repeat superfamily protein, putative, PFAM = PF14432;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf17490_18741-22774' '(at3g25060 : 613.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 22 (TAIR:AT3G12770.1); Has 38577 Blast hits to 13574 proteins in 230 species: Archae - 0; Bacteria - 4; Metazoa - 32; Fungi - 92; Plants - 37972; Viruses - 0; Other Eukaryotes - 477 (source: NCBI BLink). & (q76c99|rf1_orysa : 87.8) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1226.0) & (original description: Putative PCMP-E96, Description = Putative pentatricopeptide repeat-containing protein At3g25060, mitochondrial, PFAM = PF01535;PF01535;PF01535;PF01535;PF14432;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf17635_254247-258331' '(at2g13600 : 343.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 46660 Blast hits to 13875 proteins in 226 species: Archae - 0; Bacteria - 4; Metazoa - 74; Fungi - 58; Plants - 45878; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (reliability: 686.0) & (original description: Putative , Description = , PFAM = PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf17802_62737-66947' '(at5g64320 : 194.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G74580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 143.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 388.0) & (original description: Putative , Description = , PFAM = PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf17922_218140-222716' '(at1g30290 : 966.0) unknown protein; Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G39710.1); Has 53503 Blast hits to 14133 proteins in 285 species: Archae - 8; Bacteria - 48; Metazoa - 606; Fungi - 664; Plants - 50511; Viruses - 0; Other Eukaryotes - 1666 (source: NCBI BLink). & (q76c99|rf1_orysa : 239.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1932.0) & (original description: Putative , Description = Multidrug and toxic compound extrusion protein, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf18061_50755-55310' '(at1g19290 : 763.0) Pentatricopeptide repeat (PPR) superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G55840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 257.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1526.0) & (original description: Putative At1g19290, Description = Putative pentatricopeptide repeat-containing protein At1g19290, PFAM = PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041;PF01535;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf18121_17306-21534' '(at2g29760 : 936.0) Encodes a chloroplast RNA editing factor.; ORGANELLE TRANSCRIPT PROCESSING 81 (OTP81); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G08070.1); Has 39055 Blast hits to 14294 proteins in 286 species: Archae - 1; Bacteria - 14; Metazoa - 160; Fungi - 158; Plants - 37962; Viruses - 2; Other Eukaryotes - 758 (source: NCBI BLink). & (q76c99|rf1_orysa : 102.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1872.0) & (original description: Putative otp82, Description = Organelle transcript processing 82, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf19173_105450-110092' '(at2g39620 : 766.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G09040.1); Has 57584 Blast hits to 13450 proteins in 210 species: Archae - 0; Bacteria - 3; Metazoa - 36; Fungi - 107; Plants - 56697; Viruses - 0; Other Eukaryotes - 741 (source: NCBI BLink). & (q76c99|rf1_orysa : 85.1) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1532.0) & (original description: Putative PCMP-E33, Description = Pentatricopeptide repeat-containing protein At2g39620, PFAM = PF13041;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf19230_231315-235195' '(at5g59200 : 606.0) Encodes a chloroplast RNA editing factor.; ORGANELLE TRANSCRIPT PROCESSING 80 (OTP80); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G37380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 89.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1212.0) & (original description: Putative ELI1, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF13041;PF13041;PF14432)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf19479_117634-123152' '(at2g32630 : 597.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G05670.2); Has 59391 Blast hits to 14965 proteins in 315 species: Archae - 4; Bacteria - 81; Metazoa - 864; Fungi - 1178; Plants - 55320; Viruses - 0; Other Eukaryotes - 1944 (source: NCBI BLink). & (q76c99|rf1_orysa : 257.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1194.0) & (original description: Putative At2g32630, Description = Pentatricopeptide repeat-containing protein At2g32630, PFAM = PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF13041;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf19930_132929-136422' '(at1g05600 : 557.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G46100.1). & (q76c99|rf1_orysa : 125.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1114.0) & (original description: Putative At1g05600, Description = Pentatricopeptide repeat-containing protein At1g05600, PFAM = PF13041;PF13041;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf20010_52516-57835' '(at1g10270 : 527.0) glutamine-rich protein 23 (GRP23); FUNCTIONS IN: binding; INVOLVED IN: embryo development, cell division; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G49240.1); Has 43483 Blast hits to 18975 proteins in 889 species: Archae - 27; Bacteria - 1738; Metazoa - 7010; Fungi - 2820; Plants - 24944; Viruses - 157; Other Eukaryotes - 6787 (source: NCBI BLink). & (q76c99|rf1_orysa : 105.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1054.0) & (original description: Putative GRP23, Description = Glutamine-rich protein 23, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf20124_142248-146122' '(at1g31430 : 627.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: SLOW GROWTH 1 (TAIR:AT2G22410.1); Has 41733 Blast hits to 13930 proteins in 242 species: Archae - 0; Bacteria - 11; Metazoa - 58; Fungi - 74; Plants - 41075; Viruses - 0; Other Eukaryotes - 515 (source: NCBI BLink). & (q76c99|rf1_orysa : 103.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1254.0) & (original description: Putative glysoja_036338, Description = Pentatricopeptide repeat-containing protein, PFAM = PF13041;PF13041;PF13041;PF13041;PF01535;PF01535;PF01535)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf21900_2732-6323' '(at1g13040 : 610.0) Pentatricopeptide repeat (PPR-like) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G62910.1); Has 55149 Blast hits to 14680 proteins in 295 species: Archae - 3; Bacteria - 38; Metazoa - 581; Fungi - 873; Plants - 52114; Viruses - 0; Other Eukaryotes - 1540 (source: NCBI BLink). & (q76c99|rf1_orysa : 233.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1220.0) & (original description: Putative MTR_8g089700, Description = PPR containing plant-like protein, PFAM = PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF13041;PF12854)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf22403_22590-26714' '(at2g30780 : 463.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT2G48000.1); Has 13236 Blast hits to 5853 proteins in 219 species: Archae - 0; Bacteria - 7; Metazoa - 110; Fungi - 117; Plants - 12711; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (reliability: 926.0) & (original description: Putative At2g30780, Description = Pentatricopeptide repeat-containing protein At2g30780, PFAM = PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf24272_8218-16623' '(at5g37570 : 605.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G29230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 93.6) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1210.0) & (original description: Putative PCMP-E37, Description = Putative pentatricopeptide repeat-containing protein At5g37570, PFAM = PF01535;PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf28150_4573-8870' '(at2g02150 : 753.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G05670.2); Has 63152 Blast hits to 15060 proteins in 311 species: Archae - 5; Bacteria - 73; Metazoa - 914; Fungi - 1071; Plants - 58741; Viruses - 0; Other Eukaryotes - 2348 (source: NCBI BLink). & (q76c99|rf1_orysa : 273.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1506.0) & (original description: Putative At2g02150, Description = Putative pentatricopeptide repeat-containing protein At2g02150, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF13041;PF13041)' T '35.1.5' 'not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein' 'niben101scf34892_12082-16762' '(at2g26790 : 572.0) Pentatricopeptide repeat (PPR) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G13800.1); Has 52197 Blast hits to 13814 proteins in 285 species: Archae - 9; Bacteria - 44; Metazoa - 475; Fungi - 643; Plants - 49485; Viruses - 2; Other Eukaryotes - 1539 (source: NCBI BLink). & (q76c99|rf1_orysa : 259.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1144.0) & (original description: Putative At2g26790, Description = Pentatricopeptide repeat-containing protein At2g26790, mitochondrial, PFAM = PF01535;PF01535;PF01535;PF01535;PF13041;PF13041;PF13041;PF13041;PF13041;PF12854;PF12854)' T '35.1.6' 'not assigned.no ontology.Toll-Interleukin-Resistance (TIR) domain-containing protein' '' '' '35.1.7' 'not assigned.no ontology.AT hook motif-containing protein' 'nbv0.3scaffold45810_1-2786' '(at4g14465 : 188.0) AT-hook motif nuclear-localized protein 20 (AHL20); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 19 (TAIR:AT3G04570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 134.0) no description available & (reliability: 376.0) & (original description: Putative AHL20, Description = AT-hook motif nuclear-localized protein 20, PFAM = PF03479)' T '35.1.7' 'not assigned.no ontology.AT hook motif-containing protein' 'nbv0.5scaffold793_482522-485518' '(at4g14465 : 186.0) AT-hook motif nuclear-localized protein 20 (AHL20); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 19 (TAIR:AT3G04570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 134.0) no description available & (reliability: 372.0) & (original description: Putative AGF1, Description = AT hook motif DNA-binding family protein, PFAM = PF03479)' T '35.1.7' 'not assigned.no ontology.AT hook motif-containing protein' 'niben101scf11125_146351-150804' '(at4g14465 : 183.0) AT-hook motif nuclear-localized protein 20 (AHL20); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 19 (TAIR:AT3G04570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86345 : 133.0) no description available & (reliability: 366.0) & (original description: Putative AGF1, Description = AT hook motif DNA-binding family protein, PFAM = PF03479)' T '35.1.8' 'not assigned.no ontology.BSD domain-containing protein' 'nbv0.3scaffold8287_1308-16647' '(at1g69030 : 82.4) BSD domain-containing protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT1G26300.1); Has 264 Blast hits to 264 proteins in 50 species: Archae - 4; Bacteria - 7; Metazoa - 53; Fungi - 11; Plants - 174; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative BSD5, Description = Os02g0726400 protein, PFAM = )' T '35.1.8' 'not assigned.no ontology.BSD domain-containing protein' 'nbv0.5scaffold1134_458393-464123' '(at1g69030 : 83.2) BSD domain-containing protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT1G26300.1); Has 264 Blast hits to 264 proteins in 50 species: Archae - 4; Bacteria - 7; Metazoa - 53; Fungi - 11; Plants - 174; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative)' T '35.1.8' 'not assigned.no ontology.BSD domain-containing protein' 'niben044scf00022417ctg008_2489-8167' '(at3g24820 : 125.0) BSD domain-containing protein; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT1G69030.1); Has 175 Blast hits to 175 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 0; Plants - 153; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative BSD5, Description = BSD transcription factor, PFAM = PF03909)' T '35.1.8' 'not assigned.no ontology.BSD domain-containing protein' 'niben044scf00027829ctg008_5091-7647' '(at4g13110 : 154.0) BSD domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT1G03350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37901 : 111.0) no description available & (reliability: 308.0) & (original description: Putative PGSC0003DMG400012765, Description = BSD domain-containing protein, putative, PFAM = PF03909)' T '35.1.8' 'not assigned.no ontology.BSD domain-containing protein' 'niben101scf00337_74637-89029' '(at1g69030 : 179.0) BSD domain-containing protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT1G26300.1); Has 264 Blast hits to 264 proteins in 50 species: Archae - 4; Bacteria - 7; Metazoa - 53; Fungi - 11; Plants - 174; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative BSD5, Description = BSD transcription factor, PFAM = PF03909)' T '35.1.8' 'not assigned.no ontology.BSD domain-containing protein' 'niben101scf00621_1315816-1319195' '(at4g13110 : 154.0) BSD domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT1G03350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37901 : 112.0) no description available & (reliability: 308.0) & (original description: Putative At4g13110, Description = BSD domain-containing protein, PFAM = PF03909)' T '35.1.8' 'not assigned.no ontology.BSD domain-containing protein' 'niben101scf00920_860175-867755' '(at3g24820 : 134.0) BSD domain-containing protein; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT1G69030.1); Has 175 Blast hits to 175 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 0; Plants - 153; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative BSD5, Description = BSD transcription factor, PFAM = PF03909)' T '35.1.8' 'not assigned.no ontology.BSD domain-containing protein' 'niben101scf00952_127209-130483' '(at4g13110 : 154.0) BSD domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT1G03350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37901 : 113.0) no description available & (reliability: 308.0) & (original description: Putative PGSC0003DMG400012765, Description = BSD domain-containing protein, putative, PFAM = PF03909)' T '35.1.8' 'not assigned.no ontology.BSD domain-containing protein' 'niben101scf01391_475718-479292' '(at1g03350 : 166.0) BSD domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT4G13110.1); Has 10642 Blast hits to 5945 proteins in 665 species: Archae - 52; Bacteria - 3714; Metazoa - 2927; Fungi - 1314; Plants - 393; Viruses - 71; Other Eukaryotes - 2171 (source: NCBI BLink). & (gnl|cdd|37901 : 126.0) no description available & (reliability: 332.0) & (original description: Putative At4g13110, Description = Synapse-associated protein, putative, PFAM = PF03909)' T '35.1.8' 'not assigned.no ontology.BSD domain-containing protein' 'niben101scf02632_647851-657720' '(at1g69030 : 176.0) BSD domain-containing protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT1G26300.1); Has 264 Blast hits to 264 proteins in 50 species: Archae - 4; Bacteria - 7; Metazoa - 53; Fungi - 11; Plants - 174; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative BSD5, Description = BSD transcription factor, PFAM = PF03909)' T '35.1.8' 'not assigned.no ontology.BSD domain-containing protein' 'niben101scf02699_105063-108634' '(at1g03350 : 173.0) BSD domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT4G13110.1); Has 10642 Blast hits to 5945 proteins in 665 species: Archae - 52; Bacteria - 3714; Metazoa - 2927; Fungi - 1314; Plants - 393; Viruses - 71; Other Eukaryotes - 2171 (source: NCBI BLink). & (gnl|cdd|37901 : 123.0) no description available & (reliability: 346.0) & (original description: Putative BSD1, Description = BSD domain-containing protein, putative, PFAM = PF03909)' T '35.1.9' 'not assigned.no ontology.BTB/POZ domain-containing protein' 'nbv0.3scaffold26866_7130-14520' '(at3g61600 : 750.0) POZ/BTB containing-protein AtPOB1; POZ/BTB containin G-protein 1 (POB1); CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/Kelch-associated (InterPro:IPR011705), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ/Kelch-associated protein (TAIR:AT2G46260.1); Has 3475 Blast hits to 3460 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 3231; Fungi - 0; Plants - 131; Viruses - 11; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|39642 : 95.1) no description available & (reliability: 1500.0) & (original description: Putative POB1, Description = AtPOB1, PFAM = PF00651;PF07707)' T '35.1.9' 'not assigned.no ontology.BTB/POZ domain-containing protein' 'nbv0.3scaffold42480_1-6422' '(at3g61600 : 738.0) POZ/BTB containing-protein AtPOB1; POZ/BTB containin G-protein 1 (POB1); CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/Kelch-associated (InterPro:IPR011705), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ/Kelch-associated protein (TAIR:AT2G46260.1); Has 3475 Blast hits to 3460 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 3231; Fungi - 0; Plants - 131; Viruses - 11; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|39642 : 85.4) no description available & (reliability: 1476.0) & (original description: Putative POB1, Description = BTB/POZ domain-containing protein POB1, PFAM = PF00651;PF07707)' T '35.1.9' 'not assigned.no ontology.BTB/POZ domain-containing protein' 'nbv0.3scaffold47281_11782-16022' '(at3g61600 : 678.0) POZ/BTB containing-protein AtPOB1; POZ/BTB containin G-protein 1 (POB1); CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/Kelch-associated (InterPro:IPR011705), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ/Kelch-associated protein (TAIR:AT2G46260.1); Has 3475 Blast hits to 3460 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 3231; Fungi - 0; Plants - 131; Viruses - 11; Other Eukaryotes - 102 (source: NCBI BLink). & (reliability: 1356.0) & (original description: Putative POB1, Description = BTB/POZ domain-containing protein POB1, PFAM = PF00651;PF07707)' T '35.1.9' 'not assigned.no ontology.BTB/POZ domain-containing protein' 'niben044scf00002439ctg000_1-5109' '(at3g49900 : 290.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT5G13600.1). & (reliability: 580.0) & (original description: Putative BnaC08g21470D, Description = BnaC08g21470D protein, PFAM = PF03000)' T '35.1.9' 'not assigned.no ontology.BTB/POZ domain-containing protein' 'niben044scf00007550ctg003_14477-22582' '(at2g30600 : 1037.0) BTB/POZ domain-containing protein; INVOLVED IN: cell adhesion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Coagulation factor 5/8 type, C-terminal (InterPro:IPR000421), Farnesoic acid 0-methyl transferase (InterPro:IPR022041), BTB/POZ (InterPro:IPR013069), BTB/Kelch-associated (InterPro:IPR011705), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G21780.2). & (gnl|cdd|39477 : 165.0) no description available & (gnl|cdd|84929 : 80.4) no description available & (reliability: 2074.0) & (original description: Putative At2g30600/At2g30610, Description = BTB/POZ domain-containing protein At2g30600, PFAM = PF07707;PF00651;PF00651;PF12248;PF00754)' T '35.1.9' 'not assigned.no ontology.BTB/POZ domain-containing protein' 'niben044scf00012016ctg005_1-2923' '(at3g61600 : 115.0) POZ/BTB containing-protein AtPOB1; POZ/BTB containin G-protein 1 (POB1); CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/Kelch-associated (InterPro:IPR011705), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ/Kelch-associated protein (TAIR:AT2G46260.1); Has 3475 Blast hits to 3460 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 3231; Fungi - 0; Plants - 131; Viruses - 11; Other Eukaryotes - 102 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative POB1, Description = AtPOB1, PFAM = )' T '35.1.9' 'not assigned.no ontology.BTB/POZ domain-containing protein' 'niben101scf00470_741266-749571' '(at3g61600 : 822.0) POZ/BTB containing-protein AtPOB1; POZ/BTB containin G-protein 1 (POB1); CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/Kelch-associated (InterPro:IPR011705), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ/Kelch-associated protein (TAIR:AT2G46260.1); Has 3475 Blast hits to 3460 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 3231; Fungi - 0; Plants - 131; Viruses - 11; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|39642 : 80.4) no description available & (reliability: 1644.0) & (original description: Putative At4g01160, Description = BTB/POZ domain-containing protein At4g01160, PFAM = PF00651;PF07707)' T '35.1.9' 'not assigned.no ontology.BTB/POZ domain-containing protein' 'niben101scf00503_1116754-1133218' '(at3g61600 : 779.0) POZ/BTB containing-protein AtPOB1; POZ/BTB containin G-protein 1 (POB1); CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/Kelch-associated (InterPro:IPR011705), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ/Kelch-associated protein (TAIR:AT2G46260.1); Has 3475 Blast hits to 3460 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 3231; Fungi - 0; Plants - 131; Viruses - 11; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|39642 : 86.2) no description available & (reliability: 1558.0) & (original description: Putative POB1, Description = AtPOB1, PFAM = PF00651;PF07707)' T '35.1.9' 'not assigned.no ontology.BTB/POZ domain-containing protein' 'niben101scf00712_1697591-1710881' '(at2g30600 : 1038.0) BTB/POZ domain-containing protein; INVOLVED IN: cell adhesion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Coagulation factor 5/8 type, C-terminal (InterPro:IPR000421), Farnesoic acid 0-methyl transferase (InterPro:IPR022041), BTB/POZ (InterPro:IPR013069), BTB/Kelch-associated (InterPro:IPR011705), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G21780.2). & (gnl|cdd|39477 : 157.0) no description available & (reliability: 2076.0) & (original description: Putative At2g30600/At2g30610, Description = BTB/POZ domain-containing protein At2g30600, PFAM = PF12248;PF00651;PF00651;PF07707;PF00754)' T '35.1.9' 'not assigned.no ontology.BTB/POZ domain-containing protein' 'niben101scf00991_430580-444553' '(at3g49900 : 315.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT5G13600.1). & (reliability: 630.0) & (original description: Putative At3g49900, Description = BTB/POZ domain-containing protein At3g49900, PFAM = PF03000;PF00651)' T '35.1.9' 'not assigned.no ontology.BTB/POZ domain-containing protein' 'niben101scf01817_358370-363928' '(at3g61600 : 653.0) POZ/BTB containing-protein AtPOB1; POZ/BTB containin G-protein 1 (POB1); CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/Kelch-associated (InterPro:IPR011705), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ/Kelch-associated protein (TAIR:AT2G46260.1); Has 3475 Blast hits to 3460 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 3231; Fungi - 0; Plants - 131; Viruses - 11; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|39642 : 92.0) no description available & (reliability: 1306.0) & (original description: Putative POB1, Description = BTB/POZ domain-containing protein POB1, PFAM = PF07707;PF00651)' T '35.1.9' 'not assigned.no ontology.BTB/POZ domain-containing protein' 'niben101scf01817_358731-366645' '(at3g61600 : 726.0) POZ/BTB containing-protein AtPOB1; POZ/BTB containin G-protein 1 (POB1); CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/Kelch-associated (InterPro:IPR011705), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ/Kelch-associated protein (TAIR:AT2G46260.1); Has 3475 Blast hits to 3460 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 3231; Fungi - 0; Plants - 131; Viruses - 11; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|39642 : 92.4) no description available & (reliability: 1452.0) & (original description: Putative POB1, Description = BTB/POZ domain-containing protein POB1, PFAM = PF07707;PF00651)' T '35.1.9' 'not assigned.no ontology.BTB/POZ domain-containing protein' 'niben101scf17140_60682-67806' '(at3g61600 : 768.0) POZ/BTB containing-protein AtPOB1; POZ/BTB containin G-protein 1 (POB1); CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/Kelch-associated (InterPro:IPR011705), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ/Kelch-associated protein (TAIR:AT2G46260.1); Has 3475 Blast hits to 3460 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 3231; Fungi - 0; Plants - 131; Viruses - 11; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|39642 : 85.4) no description available & (reliability: 1536.0) & (original description: Putative POB1, Description = BTB/POZ domain-containing protein POB1, PFAM = PF07707;PF00651)' T '35.1.9' 'not assigned.no ontology.BTB/POZ domain-containing protein' 'niben101scf31339_138944-143347' '(at1g55760 : 511.0) BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G21780.2); Has 5280 Blast hits to 5249 proteins in 149 species: Archae - 0; Bacteria - 0; Metazoa - 3933; Fungi - 29; Plants - 1085; Viruses - 19; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|39642 : 82.7) no description available & (gnl|cdd|84929 : 81.1) no description available & (reliability: 1022.0) & (original description: Putative At1g55760, Description = BTB/POZ domain-containing protein At1g55760, PFAM = PF00651)' T '35.1.10' 'not assigned.no ontology.Dof-type zinc finger domain-containing protein' '' '' '35.1.11' 'not assigned.no ontology.double-stranded RNA-binding domain (DsRBD)-containing protein' '' '' '35.1.12' 'not assigned.no ontology.pumilio/Puf RNA-binding domain-containing protein' 'nbv0.3scaffold10244_8973-17987' '(at2g29190 : 903.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 2 (PUM2); CONTAINS InterPro DOMAIN/s: Nucleic acid binding NABP (InterPro:IPR012940), Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 1 (TAIR:AT2G29200.1). & (gnl|cdd|36701 : 492.0) no description available & (gnl|cdd|34702 : 278.0) no description available & (reliability: 1806.0) & (original description: Putative APUM2, Description = Pumilio homolog 2, PFAM = PF00806;PF00806;PF00806;PF00806;PF00806;PF00806;PF00806;PF00806;PF07990;PF07990)' T '35.1.12' 'not assigned.no ontology.pumilio/Puf RNA-binding domain-containing protein' 'nbv0.3scaffold20254_19788-29997' '(at3g20250 : 427.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 5 (PUM5); FUNCTIONS IN: RNA binding, binding; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 6 (TAIR:AT4G25880.1); Has 4771 Blast hits to 2450 proteins in 259 species: Archae - 0; Bacteria - 10; Metazoa - 1074; Fungi - 1429; Plants - 1087; Viruses - 0; Other Eukaryotes - 1171 (source: NCBI BLink). & (gnl|cdd|36701 : 233.0) no description available & (gnl|cdd|34702 : 159.0) no description available & (reliability: 854.0) & (original description: Putative pum1, Description = Pumilio isogeny 2, PFAM = PF00806;PF00806;PF00806;PF00806;PF00806)' T '35.1.12' 'not assigned.no ontology.pumilio/Puf RNA-binding domain-containing protein' 'nbv0.3scaffold29250_389-11267' '(at2g29200 : 885.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 1 (PUM1); FUNCTIONS IN: RNA binding, binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Nucleic acid binding NABP (InterPro:IPR012940), Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 3 (TAIR:AT2G29140.1); Has 3905 Blast hits to 1986 proteins in 235 species: Archae - 0; Bacteria - 0; Metazoa - 808; Fungi - 1312; Plants - 896; Viruses - 0; Other Eukaryotes - 889 (source: NCBI BLink). & (gnl|cdd|36701 : 479.0) no description available & (gnl|cdd|34702 : 273.0) no description available & (reliability: 1770.0) & (original description: Putative puf2, Description = Pumilio isogeny 2, PFAM = PF07990;PF00806;PF00806;PF00806;PF00806;PF00806;PF00806;PF00806;PF00806)' T '35.1.12' 'not assigned.no ontology.pumilio/Puf RNA-binding domain-containing protein' 'nbv0.3scaffold33991_16436-22661' '(at1g72320 : 651.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 23 (PUM23); FUNCTIONS IN: RNA binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37399 : 349.0) no description available & (reliability: 1302.0) & (original description: Putative APUM23, Description = Pumilio homolog 23, PFAM = )' T '35.1.12' 'not assigned.no ontology.pumilio/Puf RNA-binding domain-containing protein' 'nbv0.5scaffold2600_82082-90422' '(at2g29190 : 786.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 2 (PUM2); CONTAINS InterPro DOMAIN/s: Nucleic acid binding NABP (InterPro:IPR012940), Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 1 (TAIR:AT2G29200.1). & (gnl|cdd|36701 : 479.0) no description available & (gnl|cdd|34702 : 282.0) no description available & (reliability: 1572.0) & (original description: Putative puf2, Description = Pumilio isogeny 2, PFAM = PF00806;PF00806;PF00806;PF00806;PF00806;PF00806;PF00806;PF00806;PF07990;PF07990)' T '35.1.12' 'not assigned.no ontology.pumilio/Puf RNA-binding domain-containing protein' 'niben044scf00013490ctg002_33350-40392' '(at2g29190 : 764.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 2 (PUM2); CONTAINS InterPro DOMAIN/s: Nucleic acid binding NABP (InterPro:IPR012940), Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 1 (TAIR:AT2G29200.1). & (gnl|cdd|36701 : 489.0) no description available & (gnl|cdd|34702 : 279.0) no description available & (reliability: 1528.0) & (original description: Putative puf2, Description = Pumilio family protein, PFAM = PF07990;PF00806;PF00806;PF00806;PF00806;PF00806;PF00806;PF00806;PF00806)' T '35.1.12' 'not assigned.no ontology.pumilio/Puf RNA-binding domain-containing protein' 'niben044scf00030504ctg008_4514-7318' '(at2g29190 : 105.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 2 (PUM2); CONTAINS InterPro DOMAIN/s: Nucleic acid binding NABP (InterPro:IPR012940), Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 1 (TAIR:AT2G29200.1). & (reliability: 210.0) & (original description: Putative Bpm, Description = Pumilio Mpt5 protein, putative, PFAM = )' T '35.1.12' 'not assigned.no ontology.pumilio/Puf RNA-binding domain-containing protein' 'niben044scf00033849ctg010_1-5186' '(at5g56510 : 415.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 12 (PUM12); FUNCTIONS IN: RNA binding, binding; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 7 (TAIR:AT1G78160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37260 : 342.0) no description available & (gnl|cdd|34702 : 227.0) no description available & (reliability: 830.0) & (original description: Putative BnaA09g30760D, Description = BnaA09g30760D protein, PFAM = PF00806;PF00806;PF00806;PF00806;PF00806;PF00806;PF00806)' T '35.1.12' 'not assigned.no ontology.pumilio/Puf RNA-binding domain-containing protein' 'niben101scf00734_45312-52597' '(at3g10360 : 526.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 4 (PUM4); FUNCTIONS IN: RNA binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Nucleic acid binding NABP (InterPro:IPR012940), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 1 (TAIR:AT2G29200.1); Has 3756 Blast hits to 2007 proteins in 241 species: Archae - 0; Bacteria - 4; Metazoa - 783; Fungi - 1274; Plants - 892; Viruses - 0; Other Eukaryotes - 803 (source: NCBI BLink). & (gnl|cdd|36701 : 446.0) no description available & (gnl|cdd|34702 : 259.0) no description available & (reliability: 1052.0) & (original description: Putative puf2, Description = Pumilio isogeny 2, PFAM = PF00806;PF00806;PF00806;PF00806;PF00806;PF00806;PF00806;PF00806;PF07990)' T '35.1.12' 'not assigned.no ontology.pumilio/Puf RNA-binding domain-containing protein' 'niben101scf00863_1789612-1797476' '(at3g10360 : 535.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 4 (PUM4); FUNCTIONS IN: RNA binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Nucleic acid binding NABP (InterPro:IPR012940), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 1 (TAIR:AT2G29200.1); Has 3756 Blast hits to 2007 proteins in 241 species: Archae - 0; Bacteria - 4; Metazoa - 783; Fungi - 1274; Plants - 892; Viruses - 0; Other Eukaryotes - 803 (source: NCBI BLink). & (gnl|cdd|36701 : 441.0) no description available & (gnl|cdd|34702 : 259.0) no description available & (reliability: 1070.0) & (original description: Putative pum, Description = Maternal protein pumilio, PFAM = PF07990;PF07990;PF00806;PF00806;PF00806;PF00806;PF00806;PF00806;PF00806;PF00806)' T '35.1.12' 'not assigned.no ontology.pumilio/Puf RNA-binding domain-containing protein' 'niben101scf01283_1102-6413' '(at1g72320 : 153.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 23 (PUM23); FUNCTIONS IN: RNA binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37399 : 107.0) no description available & (reliability: 306.0) & (original description: Putative APUM23, Description = APUM-23, PFAM = PF00806)' T '35.1.12' 'not assigned.no ontology.pumilio/Puf RNA-binding domain-containing protein' 'niben101scf01463_47404-57958' '(at3g20250 : 701.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 5 (PUM5); FUNCTIONS IN: RNA binding, binding; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 6 (TAIR:AT4G25880.1); Has 4771 Blast hits to 2450 proteins in 259 species: Archae - 0; Bacteria - 10; Metazoa - 1074; Fungi - 1429; Plants - 1087; Viruses - 0; Other Eukaryotes - 1171 (source: NCBI BLink). & (gnl|cdd|36701 : 425.0) no description available & (gnl|cdd|34702 : 265.0) no description available & (reliability: 1402.0) & (original description: Putative APUM5, Description = Pumilio homolog 5, PFAM = PF00806;PF00806;PF00806;PF00806;PF00806;PF00806;PF00806;PF00806)' T '35.1.12' 'not assigned.no ontology.pumilio/Puf RNA-binding domain-containing protein' 'niben101scf02373_558858-565506' '(at1g78160 : 419.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 7 (PUM7); CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 8 (TAIR:AT1G22240.1); Has 2852 Blast hits to 1667 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 724; Fungi - 847; Plants - 715; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink). & (gnl|cdd|37260 : 346.0) no description available & (gnl|cdd|34702 : 221.0) no description available & (reliability: 838.0) & (original description: Putative PUM, Description = Pumilio RNA-binding family, PFAM = PF00806;PF00806;PF00806;PF00806;PF00806;PF00806)' T '35.1.12' 'not assigned.no ontology.pumilio/Puf RNA-binding domain-containing protein' 'niben101scf04993_530631-535951' '(gnl|cdd|37260 : 185.0) no description available & (at5g56510 : 127.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 12 (PUM12); FUNCTIONS IN: RNA binding, binding; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 7 (TAIR:AT1G78160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34702 : 104.0) no description available & (reliability: 254.0) & (original description: Putative , Description = , PFAM = PF00806;PF00806)' T '35.1.12' 'not assigned.no ontology.pumilio/Puf RNA-binding domain-containing protein' 'niben101scf04995_1402027-1410855' '(gnl|cdd|37260 : 273.0) no description available & (at5g56510 : 229.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 12 (PUM12); FUNCTIONS IN: RNA binding, binding; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 7 (TAIR:AT1G78160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|34702 : 202.0) no description available & (reliability: 458.0) & (original description: Putative APUM12, Description = Armadillo-like helical, PFAM = PF00806;PF00806;PF00806;PF00806)' T '35.1.12' 'not assigned.no ontology.pumilio/Puf RNA-binding domain-containing protein' 'niben101scf05278_132686-135385' '(at2g29200 : 105.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 1 (PUM1); FUNCTIONS IN: RNA binding, binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Nucleic acid binding NABP (InterPro:IPR012940), Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 3 (TAIR:AT2G29140.1); Has 3905 Blast hits to 1986 proteins in 235 species: Archae - 0; Bacteria - 0; Metazoa - 808; Fungi - 1312; Plants - 896; Viruses - 0; Other Eukaryotes - 889 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative APUM2, Description = Pumilio Mpt5 protein, putative, PFAM = )' T '35.1.12' 'not assigned.no ontology.pumilio/Puf RNA-binding domain-containing protein' 'niben101scf08041_77069-400259' '(at2g29200 : 888.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 1 (PUM1); FUNCTIONS IN: RNA binding, binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Nucleic acid binding NABP (InterPro:IPR012940), Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 3 (TAIR:AT2G29140.1); Has 3905 Blast hits to 1986 proteins in 235 species: Archae - 0; Bacteria - 0; Metazoa - 808; Fungi - 1312; Plants - 896; Viruses - 0; Other Eukaryotes - 889 (source: NCBI BLink). & (gnl|cdd|36701 : 480.0) no description available & (gnl|cdd|34702 : 278.0) no description available & (reliability: 1776.0) & (original description: Putative APUM2, Description = Pumilio homolog 2, PFAM = PF00806;PF00806;PF00806;PF00806;PF00806;PF00806;PF00806;PF00806;PF07990;PF07990)' T '35.1.12' 'not assigned.no ontology.pumilio/Puf RNA-binding domain-containing protein' 'niben101scf08898_25407-32318' '(at5g56510 : 440.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 12 (PUM12); FUNCTIONS IN: RNA binding, binding; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 7 (TAIR:AT1G78160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37260 : 358.0) no description available & (gnl|cdd|34702 : 239.0) no description available & (reliability: 880.0) & (original description: Putative PUF3, Description = Pumilio domain-containing protein C6G9.14, PFAM = PF00806;PF00806;PF00806;PF00806;PF00806;PF00806;PF00806;PF00806)' T '35.1.12' 'not assigned.no ontology.pumilio/Puf RNA-binding domain-containing protein' 'niben101scf08973_76370-81259' '(at2g29140 : 402.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 3 (PUM3); FUNCTIONS IN: RNA binding, binding; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Nucleic acid binding NABP (InterPro:IPR012940), Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 1 (TAIR:AT2G29200.1); Has 3920 Blast hits to 2027 proteins in 241 species: Archae - 0; Bacteria - 8; Metazoa - 815; Fungi - 1344; Plants - 871; Viruses - 0; Other Eukaryotes - 882 (source: NCBI BLink). & (gnl|cdd|36701 : 312.0) no description available & (gnl|cdd|34702 : 193.0) no description available & (reliability: 804.0) & (original description: Putative puf2, Description = Pumilio isogeny 2, PFAM = PF00806;PF00806;PF00806;PF00806;PF00806)' T '35.1.12' 'not assigned.no ontology.pumilio/Puf RNA-binding domain-containing protein' 'niben101scf10067_214210-224335' '(at2g29190 : 811.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 2 (PUM2); CONTAINS InterPro DOMAIN/s: Nucleic acid binding NABP (InterPro:IPR012940), Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 1 (TAIR:AT2G29200.1). & (gnl|cdd|36701 : 496.0) no description available & (gnl|cdd|34702 : 278.0) no description available & (reliability: 1622.0) & (original description: Putative v1g99756, Description = Predicted protein, PFAM = PF07990;PF00806;PF00806;PF00806;PF00806;PF00806;PF00806;PF00806;PF00806)' T '35.1.13' 'not assigned.no ontology.SET domain-containing protein' 'nbv0.5scaffold3610_5933-17344' '(at1g01920 : 671.0) SET domain-containing protein; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT1G14030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36551 : 117.0) no description available & (reliability: 1342.0) & (original description: Putative At1g01920, Description = Os06g0127200 protein, PFAM = PF00856)' T '35.1.13' 'not assigned.no ontology.SET domain-containing protein' 'niben044scf00000295ctg005_699-13192' '(at1g01920 : 425.0) SET domain-containing protein; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT1G14030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 850.0) & (original description: Putative At1g01920, Description = Os06g0127200 protein, PFAM = )' T '35.1.13' 'not assigned.no ontology.SET domain-containing protein' 'niben044scf00017230ctg010_2122-8905' '(at1g24610 : 588.0) Rubisco methyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 14 (TAIR:AT4G20130.1); Has 1056 Blast hits to 1053 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 281; Plants - 368; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|36551 : 201.0) no description available & (gnl|cdd|87855 : 85.0) no description available & (reliability: 1176.0) & (original description: Putative At1g24610, Description = F21J9.27, PFAM = PF09273;PF00856)' T '35.1.13' 'not assigned.no ontology.SET domain-containing protein' 'niben101scf01196_63073-71296' '(at1g24610 : 568.0) Rubisco methyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 14 (TAIR:AT4G20130.1); Has 1056 Blast hits to 1053 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 281; Plants - 368; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (gnl|cdd|36551 : 204.0) no description available & (gnl|cdd|87855 : 80.0) no description available & (reliability: 1136.0) & (original description: Putative At1g24610, Description = F21J9.27, PFAM = PF09273;PF00856)' T '35.1.13' 'not assigned.no ontology.SET domain-containing protein' 'niben101scf09021_59048-71010' '(at1g01920 : 698.0) SET domain-containing protein; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT1G14030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36551 : 125.0) no description available & (reliability: 1396.0) & (original description: Putative At1g01920, Description = SET domain-containing protein, PFAM = PF00856)' T '35.1.14' 'not assigned.no ontology.S RNA-binding domain-containing protein' 'nbv0.3scaffold29995_89-15347' '(at1g53120 : 392.0) RNA-binding S4 domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding S4 (InterPro:IPR002942), Photosystem II S4 domain protein (InterPro:IPR017506); Has 1630 Blast hits to 1630 proteins in 768 species: Archae - 0; Bacteria - 1422; Metazoa - 2; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (gnl|cdd|40034 : 225.0) no description available & (gnl|cdd|32457 : 194.0) no description available & (reliability: 784.0) & (original description: Putative alr2890, Description = Alr2890 protein, PFAM = PF01479)' T '35.1.14' 'not assigned.no ontology.S RNA-binding domain-containing protein' 'nbv0.3scaffold68638_1-7983' '(at3g23700 : 426.0) Nucleic acid-binding proteins superfamily; FUNCTIONS IN: RNA binding; INVOLVED IN: response to cold; LOCATED IN: chloroplast stroma, nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029); BEST Arabidopsis thaliana protein match is: ribosomal protein S1 (TAIR:AT5G30510.1); Has 30347 Blast hits to 20342 proteins in 2814 species: Archae - 227; Bacteria - 22388; Metazoa - 193; Fungi - 227; Plants - 347; Viruses - 0; Other Eukaryotes - 6965 (source: NCBI BLink). & (gnl|cdd|81998 : 132.0) no description available & (p29344|rr1_spiol : 95.1) 30S ribosomal protein S1, chloroplast precursor (CS1) - Spinacia oleracea (Spinach) & (reliability: 852.0) & (original description: Putative Sb01g001480, Description = Putative uncharacterized protein Sb01g001480, PFAM = PF00575;PF00575)' T '35.1.14' 'not assigned.no ontology.S RNA-binding domain-containing protein' 'nbv0.3scaffold68781_1-9597' '(at3g11964 : 568.0) RNA binding;RNA binding; FUNCTIONS IN: RNA binding; INVOLVED IN: mRNA processing, RNA processing; LOCATED IN: nucleolus, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), RNA-processing protein, HAT helix (InterPro:IPR003107), Suppressor of forked (InterPro:IPR008847); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G51110.1); Has 43836 Blast hits to 19683 proteins in 2824 species: Archae - 141; Bacteria - 33398; Metazoa - 1103; Fungi - 905; Plants - 756; Viruses - 0; Other Eukaryotes - 7533 (source: NCBI BLink). & (gnl|cdd|36288 : 306.0) no description available & (gnl|cdd|30885 : 100.0) no description available & (reliability: 1136.0) & (original description: Putative RRP5, Description = rRNA biogenesis protein rrp5, PFAM = PF00575;PF00575)' T '35.1.14' 'not assigned.no ontology.S RNA-binding domain-containing protein' 'nbv0.5scaffold27_853871-884677' '(at3g11964 : 617.0) RNA binding;RNA binding; FUNCTIONS IN: RNA binding; INVOLVED IN: mRNA processing, RNA processing; LOCATED IN: nucleolus, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), RNA-processing protein, HAT helix (InterPro:IPR003107), Suppressor of forked (InterPro:IPR008847); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G51110.1); Has 43836 Blast hits to 19683 proteins in 2824 species: Archae - 141; Bacteria - 33398; Metazoa - 1103; Fungi - 905; Plants - 756; Viruses - 0; Other Eukaryotes - 7533 (source: NCBI BLink). & (gnl|cdd|36288 : 161.0) no description available & (reliability: 1234.0) & (original description: Putative BnaAnng23730D, Description = BnaAnng23730D protein, PFAM = PF00575)' T '35.1.14' 'not assigned.no ontology.S RNA-binding domain-containing protein' 'nbv0.5scaffold2031_144033-196163' '(at3g11964 : 2017.0) RNA binding;RNA binding; FUNCTIONS IN: RNA binding; INVOLVED IN: mRNA processing, RNA processing; LOCATED IN: nucleolus, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), RNA-processing protein, HAT helix (InterPro:IPR003107), Suppressor of forked (InterPro:IPR008847); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G51110.1); Has 43836 Blast hits to 19683 proteins in 2824 species: Archae - 141; Bacteria - 33398; Metazoa - 1103; Fungi - 905; Plants - 756; Viruses - 0; Other Eukaryotes - 7533 (source: NCBI BLink). & (gnl|cdd|36288 : 1126.0) no description available & (gnl|cdd|30885 : 120.0) no description available & (reliability: 4034.0) & (original description: Putative RRP5, Description = rRNA biogenesis protein RRP5, PFAM = PF05843;PF00575;PF00575;PF00575;PF00575)' T '35.1.14' 'not assigned.no ontology.S RNA-binding domain-containing protein' 'nbv0.5scaffold2031_145046-370329' '(at3g11964 : 1417.0) RNA binding;RNA binding; FUNCTIONS IN: RNA binding; INVOLVED IN: mRNA processing, RNA processing; LOCATED IN: nucleolus, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), RNA-processing protein, HAT helix (InterPro:IPR003107), Suppressor of forked (InterPro:IPR008847); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G51110.1); Has 43836 Blast hits to 19683 proteins in 2824 species: Archae - 141; Bacteria - 33398; Metazoa - 1103; Fungi - 905; Plants - 756; Viruses - 0; Other Eukaryotes - 7533 (source: NCBI BLink). & (gnl|cdd|36288 : 939.0) no description available & (gnl|cdd|30885 : 121.0) no description available & (reliability: 2834.0) & (original description: Putative v1g143331, Description = Predicted protein, PFAM = PF00575;PF00575;PF00575;PF05843)' T '35.1.14' 'not assigned.no ontology.S RNA-binding domain-containing protein' 'niben044scf00037621ctg003_259-9940' '(at3g11964 : 259.0) RNA binding;RNA binding; FUNCTIONS IN: RNA binding; INVOLVED IN: mRNA processing, RNA processing; LOCATED IN: nucleolus, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), RNA-processing protein, HAT helix (InterPro:IPR003107), Suppressor of forked (InterPro:IPR008847); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G51110.1); Has 43836 Blast hits to 19683 proteins in 2824 species: Archae - 141; Bacteria - 33398; Metazoa - 1103; Fungi - 905; Plants - 756; Viruses - 0; Other Eukaryotes - 7533 (source: NCBI BLink). & (gnl|cdd|36288 : 132.0) no description available & (reliability: 518.0) & (original description: Putative RRP5, Description = rRNA biogenesis protein rrp5, PFAM = )' T '35.1.14' 'not assigned.no ontology.S RNA-binding domain-containing protein' 'niben101scf01036_710341-731281' '(at1g53120 : 387.0) RNA-binding S4 domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding S4 (InterPro:IPR002942), Photosystem II S4 domain protein (InterPro:IPR017506); Has 1630 Blast hits to 1630 proteins in 768 species: Archae - 0; Bacteria - 1422; Metazoa - 2; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (gnl|cdd|40034 : 221.0) no description available & (gnl|cdd|32457 : 193.0) no description available & (reliability: 774.0) & (original description: Putative alr2890, Description = Alr2890 protein, PFAM = PF01479)' T '35.1.14' 'not assigned.no ontology.S RNA-binding domain-containing protein' 'niben101scf02475_965371-1060955' '(at3g11964 : 1412.0) RNA binding;RNA binding; FUNCTIONS IN: RNA binding; INVOLVED IN: mRNA processing, RNA processing; LOCATED IN: nucleolus, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), RNA-processing protein, HAT helix (InterPro:IPR003107), Suppressor of forked (InterPro:IPR008847); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G51110.1); Has 43836 Blast hits to 19683 proteins in 2824 species: Archae - 141; Bacteria - 33398; Metazoa - 1103; Fungi - 905; Plants - 756; Viruses - 0; Other Eukaryotes - 7533 (source: NCBI BLink). & (gnl|cdd|36288 : 936.0) no description available & (gnl|cdd|30885 : 126.0) no description available & (reliability: 2824.0) & (original description: Putative v1g143331, Description = Predicted protein, PFAM = PF00575;PF00575;PF00575;PF05843)' T '35.1.14' 'not assigned.no ontology.S RNA-binding domain-containing protein' 'niben101scf02475_1002541-1062560' '(at3g11964 : 2007.0) RNA binding;RNA binding; FUNCTIONS IN: RNA binding; INVOLVED IN: mRNA processing, RNA processing; LOCATED IN: nucleolus, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), RNA-processing protein, HAT helix (InterPro:IPR003107), Suppressor of forked (InterPro:IPR008847); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G51110.1); Has 43836 Blast hits to 19683 proteins in 2824 species: Archae - 141; Bacteria - 33398; Metazoa - 1103; Fungi - 905; Plants - 756; Viruses - 0; Other Eukaryotes - 7533 (source: NCBI BLink). & (gnl|cdd|36288 : 1122.0) no description available & (gnl|cdd|30885 : 122.0) no description available & (reliability: 4014.0) & (original description: Putative RRP5, Description = rRNA biogenesis protein RRP5, PFAM = PF05843;PF00575;PF00575;PF00575;PF00575)' T '35.1.14' 'not assigned.no ontology.S RNA-binding domain-containing protein' 'niben101scf03732_87556-94179' '(at3g11964 : 324.0) RNA binding;RNA binding; FUNCTIONS IN: RNA binding; INVOLVED IN: mRNA processing, RNA processing; LOCATED IN: nucleolus, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), RNA-processing protein, HAT helix (InterPro:IPR003107), Suppressor of forked (InterPro:IPR008847); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G51110.1); Has 43836 Blast hits to 19683 proteins in 2824 species: Archae - 141; Bacteria - 33398; Metazoa - 1103; Fungi - 905; Plants - 756; Viruses - 0; Other Eukaryotes - 7533 (source: NCBI BLink). & (gnl|cdd|36288 : 191.0) no description available & (gnl|cdd|30885 : 81.5) no description available & (reliability: 648.0) & (original description: Putative Os07g0203275, Description = Os07g0203275 protein, PFAM = PF00575)' T '35.1.14' 'not assigned.no ontology.S RNA-binding domain-containing protein' 'niben101scf06525_117021-123689' '(at3g23700 : 423.0) Nucleic acid-binding proteins superfamily; FUNCTIONS IN: RNA binding; INVOLVED IN: response to cold; LOCATED IN: chloroplast stroma, nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029); BEST Arabidopsis thaliana protein match is: ribosomal protein S1 (TAIR:AT5G30510.1); Has 30347 Blast hits to 20342 proteins in 2814 species: Archae - 227; Bacteria - 22388; Metazoa - 193; Fungi - 227; Plants - 347; Viruses - 0; Other Eukaryotes - 6965 (source: NCBI BLink). & (gnl|cdd|81998 : 128.0) no description available & (p29344|rr1_spiol : 95.1) 30S ribosomal protein S1, chloroplast precursor (CS1) - Spinacia oleracea (Spinach) & (reliability: 846.0) & (original description: Putative TCM_020171, Description = Nucleic acid-binding proteins superfamily isoform 1, PFAM = PF00575;PF00575)' T '35.1.15' 'not assigned.no ontology.SAR DNA-binding protein' '' '' '35.1.16' 'not assigned.no ontology.speckle-type POZ protein-related' 'nbv0.3scaffold10959_143-5655' '(at3g56230 : 263.0) BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G01640.2); Has 5225 Blast hits to 5141 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 3910; Fungi - 3; Plants - 1048; Viruses - 41; Other Eukaryotes - 223 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative At3g56230, Description = BTB/POZ domain-containing protein At3g56230, PFAM = PF00651)' T '35.1.16' 'not assigned.no ontology.speckle-type POZ protein-related' 'niben101scf00819_1176466-1189362' '(at3g56230 : 255.0) BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G01640.2); Has 5225 Blast hits to 5141 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 3910; Fungi - 3; Plants - 1048; Viruses - 41; Other Eukaryotes - 223 (source: NCBI BLink). & (reliability: 510.0) & (original description: Putative At3g56230, Description = BTB/POZ domain-containing protein At3g56230, PFAM = PF00651)' T '35.1.17' 'not assigned.no ontology.transcription factor jumonji (jmjC) domain-containing protein' 'niben101scf03923_696919-719735' '(at5g19840 : 490.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G20810.2). & (gnl|cdd|37719 : 88.2) no description available & (reliability: 980.0) & (original description: Putative glysoja_028223, Description = Lysine-specific demethylase 8, PFAM = PF13621)' T '35.1.17' 'not assigned.no ontology.transcription factor jumonji (jmjC) domain-containing protein' 'niben101scf03923_698647-715780' '(at5g19840 : 252.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G20810.2). & (reliability: 504.0) & (original description: Putative , Description = Lysine-specific demethylase 8, PFAM = PF13621)' T '35.1.18' 'not assigned.no ontology.SNF2 domain-containing protein / helicase domain-containing protein' '' '' '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'nbv0.3scaffold9174_36299-41352' '(at3g03680 : 1155.0) C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT1G74720.1); Has 14333 Blast hits to 8916 proteins in 1075 species: Archae - 59; Bacteria - 2640; Metazoa - 3947; Fungi - 1236; Plants - 1682; Viruses - 124; Other Eukaryotes - 4645 (source: NCBI BLink). & (gnl|cdd|71804 : 253.0) no description available & (reliability: 2310.0) & (original description: Putative At5g17980, Description = C2 calcium/lipid-binding and phosphoribosyltransferase C-terminal domain-containing protein, PFAM = PF00168;PF00168;PF00168;PF00168;PF08372)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'nbv0.3scaffold17155_4425-20891' '(at3g59660 : 729.0) C2 domain-containing protein / GRAM domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), GRAM (InterPro:IPR004182), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding and GRAM domain containing protein (TAIR:AT1G03370.1); Has 2988 Blast hits to 2683 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 1633; Fungi - 370; Plants - 725; Viruses - 0; Other Eukaryotes - 260 (source: NCBI BLink). & (gnl|cdd|36250 : 239.0) no description available & (reliability: 1458.0) & (original description: Putative BAGP1, Description = BAG-associated GRAM protein 1, PFAM = PF00168;PF16016;PF02893)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'nbv0.3scaffold36733_15611-21069' '(at1g77460 : 1113.0) Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Armadillo-like helical (InterPro:IPR011989), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (TAIR:AT1G44120.1). & (reliability: 2226.0) & (original description: Putative At1g44120, Description = Cellulose synthase-interactive protein, PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'nbv0.3scaffold50779_4754-13776' '(at3g19830 : 633.0) NTMC2T5.2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2404, transmembrane (InterPro:IPR019411), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: N-terminal-transmembrane-C2 domain type 5.1 (TAIR:AT1G50260.1); Has 1308 Blast hits to 1143 proteins in 177 species: Archae - 0; Bacteria - 2; Metazoa - 350; Fungi - 235; Plants - 647; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 1266.0) & (original description: Putative BnaC05g32830D, Description = BnaC05g32830D protein, PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'nbv0.3scaffold53857_3466-7787' '(at3g57880 : 1419.0) Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: endoplasmic reticulum, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein (TAIR:AT1G51570.1); Has 5845 Blast hits to 4237 proteins in 266 species: Archae - 0; Bacteria - 0; Metazoa - 3557; Fungi - 274; Plants - 1573; Viruses - 0; Other Eukaryotes - 441 (source: NCBI BLink). & (gnl|cdd|71804 : 310.0) no description available & (gnl|cdd|36246 : 86.0) no description available & (reliability: 2838.0) & (original description: Putative FTIP1, Description = FT-interacting protein 1, PFAM = PF00168;PF00168;PF00168;PF08372)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'nbv0.3scaffold66132_1-17046' '(at1g48090 : 1309.0) calcium-dependent lipid-binding family protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Protein of unknown function DUF946 (InterPro:IPR009291), Vacuolar protein sorting-associated protein (InterPro:IPR009543), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973); BEST Arabidopsis thaliana protein match is: pleckstrin homology (PH) domain-containing protein (TAIR:AT4G17140.2); Has 2732 Blast hits to 1481 proteins in 212 species: Archae - 2; Bacteria - 15; Metazoa - 1181; Fungi - 466; Plants - 461; Viruses - 0; Other Eukaryotes - 607 (source: NCBI BLink). & (reliability: 2618.0) & (original description: Putative At1g48090, Description = BnaC06g01590D protein, PFAM = PF06101;PF06398)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'nbv0.3scaffold91405_1102-5217' '(at1g74720 : 1467.0) Encodes a putative transmembrane protein carrying four C(2) domains, suggesting that QKY may function in membrane trafficking in a Ca(2+)-dependent fashion. Mutant analysis shows that this gene is involved in organ development.; QUIRKY (QKY); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: organ development; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 6147 Blast hits to 4985 proteins in 369 species: Archae - 2; Bacteria - 143; Metazoa - 2968; Fungi - 627; Plants - 1368; Viruses - 31; Other Eukaryotes - 1008 (source: NCBI BLink). & (gnl|cdd|71804 : 260.0) no description available & (reliability: 2934.0) & (original description: Putative QKY, Description = Protein QUIRKY, PFAM = PF08372;PF00168;PF00168;PF00168;PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'nbv0.5scaffold66_611301-616625' '(q7f9x0|erg3_orysa : 157.0) Elicitor-responsive protein 3 (16 kDa phloem protein) (RPP16) - Oryza sativa (Rice) & (at1g63220 : 154.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G55470.2); Has 271 Blast hits to 271 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 8; Plants - 249; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|36248 : 89.5) no description available & (reliability: 308.0) & (original description: Putative , Description = Elicitor-responsive protein 3, PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'nbv0.5scaffold70_507036-642391' '(at1g04150 : 1191.0) C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 3504 Blast hits to 2915 proteins in 204 species: Archae - 0; Bacteria - 2; Metazoa - 2158; Fungi - 82; Plants - 979; Viruses - 2; Other Eukaryotes - 281 (source: NCBI BLink). & (gnl|cdd|71804 : 267.0) no description available & (reliability: 2382.0) & (original description: Putative FTIP1, Description = FT-interacting protein 1, PFAM = PF08372;PF00168;PF00168;PF00168;PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'nbv0.5scaffold111_994502-1081651' '(at4g00467 : 169.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G63220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7gc09|erg1_orysa : 89.7) Elicitor-responsive protein 1 (Fungal elicitor immediate early-responsive gene 1 protein) (FIERG1) (17 kDa phloem protein) (RPP17) - Oryza sativa (Rice) & (reliability: 338.0) & (original description: Putative , Description = , PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'nbv0.5scaffold679_525000-611695' '(at4g17140 : 3399.0) pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Protein of unknown function DUF946 (InterPro:IPR009291), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (gnl|cdd|37020 : 301.0) no description available & (gnl|cdd|34648 : 195.0) no description available & (reliability: 6798.0) & (original description: Putative VPS13, Description = Os02g0470600 protein, PFAM = PF12624;PF06101;PF06101;PF06101;PF16910;PF00169;PF06650;PF16908)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'nbv0.5scaffold2324_54504-172927' '(at1g48090 : 3482.0) calcium-dependent lipid-binding family protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Protein of unknown function DUF946 (InterPro:IPR009291), Vacuolar protein sorting-associated protein (InterPro:IPR009543), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973); BEST Arabidopsis thaliana protein match is: pleckstrin homology (PH) domain-containing protein (TAIR:AT4G17140.2); Has 2732 Blast hits to 1481 proteins in 212 species: Archae - 2; Bacteria - 15; Metazoa - 1181; Fungi - 466; Plants - 461; Viruses - 0; Other Eukaryotes - 607 (source: NCBI BLink). & (gnl|cdd|37020 : 418.0) no description available & (gnl|cdd|34648 : 214.0) no description available & (reliability: 6964.0) & (original description: Putative At1g48090, Description = BnaC06g01590D protein, PFAM = PF16908;PF06650;PF16910;PF12624;PF06398;PF06101;PF06101)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'nbv0.5scaffold4066_28782-32403' '(at4g00467 : 173.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G63220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7gc09|erg1_orysa : 87.0) Elicitor-responsive protein 1 (Fungal elicitor immediate early-responsive gene 1 protein) (FIERG1) (17 kDa phloem protein) (RPP17) - Oryza sativa (Rice) & (reliability: 346.0) & (original description: Putative , Description = , PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'nbv0.5scaffold4684_18373-23417' '(at3g03680 : 1137.0) C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT1G74720.1); Has 14333 Blast hits to 8916 proteins in 1075 species: Archae - 59; Bacteria - 2640; Metazoa - 3947; Fungi - 1236; Plants - 1682; Viruses - 124; Other Eukaryotes - 4645 (source: NCBI BLink). & (gnl|cdd|71804 : 253.0) no description available & (reliability: 2274.0) & (original description: Putative QKY, Description = C2 domain-containing family protein, PFAM = PF08372;PF00168;PF00168;PF00168;PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'nbv0.5scaffold4916_78350-90035' '(at1g77460 : 2529.0) Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Armadillo-like helical (InterPro:IPR011989), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (TAIR:AT1G44120.1). & (reliability: 5058.0) & (original description: Putative At1g77460, Description = Armadillo/beta-catenin-like repeat and C2 domain-containing protein, PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'nbv0.5scaffold5503_78983-113627' '(at1g48090 : 503.0) calcium-dependent lipid-binding family protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Protein of unknown function DUF946 (InterPro:IPR009291), Vacuolar protein sorting-associated protein (InterPro:IPR009543), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973); BEST Arabidopsis thaliana protein match is: pleckstrin homology (PH) domain-containing protein (TAIR:AT4G17140.2); Has 2732 Blast hits to 1481 proteins in 212 species: Archae - 2; Bacteria - 15; Metazoa - 1181; Fungi - 466; Plants - 461; Viruses - 0; Other Eukaryotes - 607 (source: NCBI BLink). & (gnl|cdd|37020 : 204.0) no description available & (gnl|cdd|34648 : 134.0) no description available & (reliability: 1006.0) & (original description: Putative VPS13, Description = BnaC06g01590D protein, PFAM = PF12624;PF16908)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben044scf00002102ctg000_1-2734' '(at4g17140 : 261.0) pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Protein of unknown function DUF946 (InterPro:IPR009291), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (reliability: 522.0) & (original description: Putative VPS13, Description = Vacuolar protein sorting 13, PFAM = PF16910)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben044scf00002102ctg016_2118-5953' '(at4g17140 : 372.0) pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Protein of unknown function DUF946 (InterPro:IPR009291), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (reliability: 744.0) & (original description: Putative VPS13, Description = Putative uncharacterized protein Sb01g028683, PFAM = )' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben044scf00002102ctg022_1-3793' '(at4g17140 : 308.0) pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Protein of unknown function DUF946 (InterPro:IPR009291), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (reliability: 616.0) & (original description: Putative VPS13, Description = Putative uncharacterized protein Sb01g028683, PFAM = )' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben044scf00002102ctg025_1-13507' '(at4g17140 : 603.0) pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Protein of unknown function DUF946 (InterPro:IPR009291), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (gnl|cdd|37020 : 109.0) no description available & (reliability: 1206.0) & (original description: Putative VPS13, Description = Putative uncharacterized protein AT4g17120, PFAM = PF06650;PF06101;PF06398)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben044scf00017088ctg000_10621-15377' '(at3g03680 : 1156.0) C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT1G74720.1); Has 14333 Blast hits to 8916 proteins in 1075 species: Archae - 59; Bacteria - 2640; Metazoa - 3947; Fungi - 1236; Plants - 1682; Viruses - 124; Other Eukaryotes - 4645 (source: NCBI BLink). & (gnl|cdd|71804 : 253.0) no description available & (reliability: 2312.0) & (original description: Putative QKY, Description = C2 calcium/lipid-binding plant phosphoribosyltransferase family protein, PFAM = PF08372;PF00168;PF00168;PF00168;PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben044scf00020564ctg002_1-4619' '(at3g17980 : 262.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G48590.2); Has 4930 Blast hits to 4266 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 2771; Fungi - 648; Plants - 1093; Viruses - 0; Other Eukaryotes - 418 (source: NCBI BLink). & (gnl|cdd|36248 : 212.0) no description available & (reliability: 524.0) & (original description: Putative CAR4, Description = Protein C2-DOMAIN ABA-RELATED 4, PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben044scf00021672ctg006_1115-4068' '(at1g07310 : 135.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT5G23950.1); Has 16203 Blast hits to 11144 proteins in 837 species: Archae - 8; Bacteria - 1073; Metazoa - 6146; Fungi - 3149; Plants - 3752; Viruses - 463; Other Eukaryotes - 1612 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative , Description = , PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben044scf00026583ctg004_1-3361' '(at2g20990 : 320.0) Encodes a plasma membrane localized protein with similarity to synaptotagmins, a class of membrane trafficking proteins. SYT1 is expressed in all tissues. Loss of function mutations show hypersensitivity to NaCl and electrolyte leakage from the plasma membrane. SYT1 also affects calcium dependent freezing tolerance. SYT1 probably plays a role in membrane repair such as membrane resealing after freezing induced damage. Regulates endocytosis endosome recycling at the plasma membrane, but not membrane traffic along the secretory pathway.; synaptotagmin A (SYTA); CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G20080.1). & (gnl|cdd|34643 : 83.5) no description available & (reliability: 640.0) & (original description: Putative SYT1, Description = Calcium lipid binding protein, putative, PFAM = PF17047)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben044scf00044884ctg000_47-4522' '(at3g57880 : 1423.0) Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: endoplasmic reticulum, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein (TAIR:AT1G51570.1); Has 5845 Blast hits to 4237 proteins in 266 species: Archae - 0; Bacteria - 0; Metazoa - 3557; Fungi - 274; Plants - 1573; Viruses - 0; Other Eukaryotes - 441 (source: NCBI BLink). & (gnl|cdd|71804 : 310.0) no description available & (gnl|cdd|36246 : 84.4) no description available & (reliability: 2846.0) & (original description: Putative Sb10g024200, Description = Putative uncharacterized protein Sb10g024200, PFAM = PF08372;PF00168;PF00168;PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben044scf00044884ctg001_649-5033' '(at3g57880 : 1420.0) Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: endoplasmic reticulum, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein (TAIR:AT1G51570.1); Has 5845 Blast hits to 4237 proteins in 266 species: Archae - 0; Bacteria - 0; Metazoa - 3557; Fungi - 274; Plants - 1573; Viruses - 0; Other Eukaryotes - 441 (source: NCBI BLink). & (gnl|cdd|71804 : 306.0) no description available & (gnl|cdd|36246 : 82.5) no description available & (reliability: 2840.0) & (original description: Putative FTIP1, Description = C2 calcium/lipid-binding plant phosphoribosyltransferase family protein, PFAM = PF00168;PF00168;PF00168;PF08372)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben044scf00047206ctg001_1-4468' '(at4g17140 : 508.0) pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Protein of unknown function DUF946 (InterPro:IPR009291), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (gnl|cdd|37020 : 140.0) no description available & (gnl|cdd|34648 : 95.8) no description available & (reliability: 1016.0) & (original description: Putative VPS13, Description = Os02g0470600 protein, PFAM = PF16908)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf00069_1482544-1486775' '(at5g37740 : 228.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G66360.1). & (gnl|cdd|36248 : 207.0) no description available & (reliability: 456.0) & (original description: Putative CAR3, Description = Protein C2-DOMAIN ABA-RELATED 3, PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf00207_265554-270640' '(at5g17980 : 1166.0) C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT1G74720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|71804 : 240.0) no description available & (reliability: 2332.0) & (original description: Putative At5g17980, Description = C2 calcium/lipid-binding and phosphoribosyltransferase C-terminal domain-containing protein, PFAM = PF08372;PF00168;PF00168;PF00168;PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf00343_544523-549591' '(at1g22610 : 1409.0) C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 9288 Blast hits to 5214 proteins in 278 species: Archae - 0; Bacteria - 0; Metazoa - 6273; Fungi - 392; Plants - 2016; Viruses - 0; Other Eukaryotes - 607 (source: NCBI BLink). & (gnl|cdd|71804 : 288.0) no description available & (gnl|cdd|36246 : 83.6) no description available & (reliability: 2818.0) & (original description: Putative FTIP1, Description = FT-interacting protein 1, PFAM = PF08372;PF00168;PF00168;PF00168;PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf00447_53136-55936' '(at4g01200 : 185.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT2G33320.1); Has 277 Blast hits to 277 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 277; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 370.0) & (original description: Putative At1g04540, Description = BnaA09g00140D protein, PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf00579_191129-194721' '(gnl|cdd|36248 : 208.0) no description available & (at5g37740 : 190.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G66360.1). & (reliability: 380.0) & (original description: Putative CAR1, Description = Protein C2-DOMAIN ABA-RELATED 1, PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf00799_19762-35559' '(at1g77460 : 1199.0) Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Armadillo-like helical (InterPro:IPR011989), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (TAIR:AT1G44120.1). & (reliability: 2398.0) & (original description: Putative At1g44120, Description = C2 domain-containing family protein, PFAM = PF00168;PF00514)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf01075_76582-84874' '(at3g18370 : 879.0) ATSYTF; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT5G11100.1); Has 5534 Blast hits to 4008 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 3360; Fungi - 437; Plants - 1305; Viruses - 0; Other Eukaryotes - 432 (source: NCBI BLink). & (gnl|cdd|34643 : 89.3) no description available & (reliability: 1758.0) & (original description: Putative ATSYTF, Description = AT3g18370/MYF24_8, PFAM = PF00168;PF00168;PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf01077_209284-234769' '(at3g59660 : 828.0) C2 domain-containing protein / GRAM domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), GRAM (InterPro:IPR004182), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding and GRAM domain containing protein (TAIR:AT1G03370.1); Has 2988 Blast hits to 2683 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 1633; Fungi - 370; Plants - 725; Viruses - 0; Other Eukaryotes - 260 (source: NCBI BLink). & (gnl|cdd|36250 : 284.0) no description available & (reliability: 1656.0) & (original description: Putative BAGP1, Description = BAG-associated GRAM protein 1, PFAM = PF02893;PF16016;PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf01485_182551-185357' '(at4g17140 : 256.0) pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Protein of unknown function DUF946 (InterPro:IPR009291), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (reliability: 512.0) & (original description: Putative VPS13, Description = Putative uncharacterized protein Sb01g028683, PFAM = )' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf01702_252751-259358' '(at2g20990 : 750.0) Encodes a plasma membrane localized protein with similarity to synaptotagmins, a class of membrane trafficking proteins. SYT1 is expressed in all tissues. Loss of function mutations show hypersensitivity to NaCl and electrolyte leakage from the plasma membrane. SYT1 also affects calcium dependent freezing tolerance. SYT1 probably plays a role in membrane repair such as membrane resealing after freezing induced damage. Regulates endocytosis endosome recycling at the plasma membrane, but not membrane traffic along the secretory pathway.; synaptotagmin A (SYTA); CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G20080.1). & (gnl|cdd|34643 : 165.0) no description available & (gnl|cdd|36248 : 89.5) no description available & (reliability: 1500.0) & (original description: Putative SYT1, Description = Calcium lipid binding protein, putative, PFAM = PF17047;PF00168;PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf01824_55125-59533' '(q7f9x0|erg3_orysa : 187.0) Elicitor-responsive protein 3 (16 kDa phloem protein) (RPP16) - Oryza sativa (Rice) & (at1g63220 : 174.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G55470.2); Has 271 Blast hits to 271 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 8; Plants - 249; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|36248 : 113.0) no description available & (reliability: 348.0) & (original description: Putative ERG1, Description = Elicitor-responsive protein 1, PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf02025_265012-291173' '(at2g20990 : 820.0) Encodes a plasma membrane localized protein with similarity to synaptotagmins, a class of membrane trafficking proteins. SYT1 is expressed in all tissues. Loss of function mutations show hypersensitivity to NaCl and electrolyte leakage from the plasma membrane. SYT1 also affects calcium dependent freezing tolerance. SYT1 probably plays a role in membrane repair such as membrane resealing after freezing induced damage. Regulates endocytosis endosome recycling at the plasma membrane, but not membrane traffic along the secretory pathway.; synaptotagmin A (SYTA); CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G20080.1). & (gnl|cdd|34643 : 177.0) no description available & (gnl|cdd|36246 : 84.8) no description available & (reliability: 1640.0) & (original description: Putative SYT1, Description = Synaptotagmin-1, PFAM = PF17047;PF00168;PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf02132_92641-97493' '(at1g74720 : 1286.0) Encodes a putative transmembrane protein carrying four C(2) domains, suggesting that QKY may function in membrane trafficking in a Ca(2+)-dependent fashion. Mutant analysis shows that this gene is involved in organ development.; QUIRKY (QKY); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: organ development; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 6147 Blast hits to 4985 proteins in 369 species: Archae - 2; Bacteria - 143; Metazoa - 2968; Fungi - 627; Plants - 1368; Viruses - 31; Other Eukaryotes - 1008 (source: NCBI BLink). & (gnl|cdd|71804 : 260.0) no description available & (reliability: 2572.0) & (original description: Putative QKY, Description = Protein QUIRKY, PFAM = PF08372;PF00168;PF00168;PF00168;PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf02274_154565-166023' '(at3g17980 : 263.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G48590.2); Has 4930 Blast hits to 4266 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 2771; Fungi - 648; Plants - 1093; Viruses - 0; Other Eukaryotes - 418 (source: NCBI BLink). & (gnl|cdd|36248 : 218.0) no description available & (gnl|cdd|84577 : 81.9) no description available & (reliability: 526.0) & (original description: Putative CAR5, Description = Protein C2-DOMAIN ABA-RELATED 5, PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf02688_199599-203902' '(at3g57880 : 1135.0) Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: endoplasmic reticulum, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein (TAIR:AT1G51570.1); Has 5845 Blast hits to 4237 proteins in 266 species: Archae - 0; Bacteria - 0; Metazoa - 3557; Fungi - 274; Plants - 1573; Viruses - 0; Other Eukaryotes - 441 (source: NCBI BLink). & (gnl|cdd|71804 : 279.0) no description available & (reliability: 2270.0) & (original description: Putative At4g20080, Description = Calcium-dependent lipid-binding domain-containing plant phosphoribosyltransferase-like protein, PFAM = PF00168;PF00168;PF00168;PF08372)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf02869_1808036-1824328' '(at3g55470 : 157.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G63220.1); Has 2758 Blast hits to 2659 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 1386; Fungi - 195; Plants - 959; Viruses - 0; Other Eukaryotes - 218 (source: NCBI BLink). & (q7gc09|erg1_orysa : 149.0) Elicitor-responsive protein 1 (Fungal elicitor immediate early-responsive gene 1 protein) (FIERG1) (17 kDa phloem protein) (RPP17) - Oryza sativa (Rice) & (gnl|cdd|36248 : 93.4) no description available & (reliability: 314.0) & (original description: Putative ERG1, Description = Elicitor-responsive protein 1, PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf02919_375486-392389' '(at3g17980 : 263.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G48590.2); Has 4930 Blast hits to 4266 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 2771; Fungi - 648; Plants - 1093; Viruses - 0; Other Eukaryotes - 418 (source: NCBI BLink). & (gnl|cdd|36248 : 212.0) no description available & (reliability: 526.0) & (original description: Putative CAR4, Description = Protein C2-DOMAIN ABA-RELATED 4, PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf03026_827592-837723' '(at2g22125 : 2877.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Armadillo-like helical (InterPro:IPR011989), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (TAIR:AT1G77460.2); Has 7763 Blast hits to 3084 proteins in 288 species: Archae - 8; Bacteria - 60; Metazoa - 1765; Fungi - 937; Plants - 4329; Viruses - 0; Other Eukaryotes - 664 (source: NCBI BLink). & (reliability: 5754.0) & (original description: Putative At2g22125, Description = Cellulose synthase-interactive protein 1, PFAM = PF00168;PF00514;PF00514)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf03255_58269-71088' '(at5g47710 : 225.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G70790.1); Has 5137 Blast hits to 4266 proteins in 270 species: Archae - 0; Bacteria - 0; Metazoa - 2598; Fungi - 662; Plants - 1454; Viruses - 0; Other Eukaryotes - 423 (source: NCBI BLink). & (gnl|cdd|36248 : 176.0) no description available & (gnl|cdd|84577 : 80.0) no description available & (reliability: 450.0) & (original description: Putative gpm115, Description = GTPase activating protein, PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf03263_676821-682741' '(at1g04150 : 1195.0) C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 3504 Blast hits to 2915 proteins in 204 species: Archae - 0; Bacteria - 2; Metazoa - 2158; Fungi - 82; Plants - 979; Viruses - 2; Other Eukaryotes - 281 (source: NCBI BLink). & (gnl|cdd|71804 : 266.0) no description available & (reliability: 2390.0) & (original description: Putative BnaA09g50660D, Description = BnaA09g50660D protein, PFAM = PF08372;PF00168;PF00168;PF00168;PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf03350_607944-613015' '(at1g22610 : 1397.0) C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 9288 Blast hits to 5214 proteins in 278 species: Archae - 0; Bacteria - 0; Metazoa - 6273; Fungi - 392; Plants - 2016; Viruses - 0; Other Eukaryotes - 607 (source: NCBI BLink). & (gnl|cdd|71804 : 291.0) no description available & (gnl|cdd|36246 : 82.5) no description available & (reliability: 2794.0) & (original description: Putative Sb06g034070, Description = Putative uncharacterized protein Sb06g034070, PFAM = PF08372;PF00168;PF00168;PF00168;PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf03457_4419-23182' '(at3g59660 : 748.0) C2 domain-containing protein / GRAM domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), GRAM (InterPro:IPR004182), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding and GRAM domain containing protein (TAIR:AT1G03370.1); Has 2988 Blast hits to 2683 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 1633; Fungi - 370; Plants - 725; Viruses - 0; Other Eukaryotes - 260 (source: NCBI BLink). & (gnl|cdd|36250 : 251.0) no description available & (reliability: 1496.0) & (original description: Putative BAGP1, Description = BAG-associated GRAM protein 1, PFAM = PF00168;PF02893;PF16016)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf03518_766516-772104' '(q7f9x0|erg3_orysa : 156.0) Elicitor-responsive protein 3 (16 kDa phloem protein) (RPP16) - Oryza sativa (Rice) & (at1g63220 : 154.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G55470.2); Has 271 Blast hits to 271 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 8; Plants - 249; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|36248 : 92.2) no description available & (reliability: 308.0) & (original description: Putative , Description = Elicitor-responsive protein 3, PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf03710_1204844-1215199' '(at1g77460 : 2364.0) Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Armadillo-like helical (InterPro:IPR011989), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (TAIR:AT1G44120.1). & (reliability: 4728.0) & (original description: Putative At1g77460, Description = Armadillo/beta-catenin-like repeat and C2 domain-containing protein, PFAM = PF00168;PF00514)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf04021_890112-892903' '(q7f9x0|erg3_orysa : 137.0) Elicitor-responsive protein 3 (16 kDa phloem protein) (RPP16) - Oryza sativa (Rice) & (at1g63220 : 125.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G55470.2); Has 271 Blast hits to 271 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 8; Plants - 249; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative , Description = Elicitor-responsive protein 3, PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf04382_22442-27753' '(q7gc09|erg1_orysa : 164.0) Elicitor-responsive protein 1 (Fungal elicitor immediate early-responsive gene 1 protein) (FIERG1) (17 kDa phloem protein) (RPP17) - Oryza sativa (Rice) & (at3g55470 : 163.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G63220.1); Has 2758 Blast hits to 2659 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 1386; Fungi - 195; Plants - 959; Viruses - 0; Other Eukaryotes - 218 (source: NCBI BLink). & (gnl|cdd|36248 : 96.9) no description available & (reliability: 326.0) & (original description: Putative ERG1, Description = Elicitor-responsive protein 1, PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf04679_40825-43293' '(at1g05500 : 130.0) Encodes a endomembrane-localized synaptotagmin. Synaptotagmin family proteins are calcium sensors that regulate exocytosis in mammalian cells.; NTMC2T2.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT5G11100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative SYT4, Description = Extended synaptotagmin-3, PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf04740_1889-6207' '(at3g57880 : 1407.0) Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: endoplasmic reticulum, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein (TAIR:AT1G51570.1); Has 5845 Blast hits to 4237 proteins in 266 species: Archae - 0; Bacteria - 0; Metazoa - 3557; Fungi - 274; Plants - 1573; Viruses - 0; Other Eukaryotes - 441 (source: NCBI BLink). & (gnl|cdd|71804 : 307.0) no description available & (gnl|cdd|36246 : 85.6) no description available & (reliability: 2814.0) & (original description: Putative FTIP1, Description = FT-interacting protein 1, PFAM = PF00168;PF00168;PF00168;PF08372)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf05149_162341-165240' '(at3g16510 : 142.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT4G15755.1); Has 24270 Blast hits to 15902 proteins in 854 species: Archae - 8; Bacteria - 1639; Metazoa - 9119; Fungi - 5377; Plants - 5202; Viruses - 451; Other Eukaryotes - 2474 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative SRC2, Description = Protein SRC2, PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf05251_43837-47816' '(at1g48590 : 255.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G17980.1). & (gnl|cdd|36248 : 215.0) no description available & (gnl|cdd|84577 : 82.3) no description available & (reliability: 510.0) & (original description: Putative CAR4, Description = Protein C2-DOMAIN ABA-RELATED 4, PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf06080_169426-173918' '(at3g57880 : 1108.0) Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: endoplasmic reticulum, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein (TAIR:AT1G51570.1); Has 5845 Blast hits to 4237 proteins in 266 species: Archae - 0; Bacteria - 0; Metazoa - 3557; Fungi - 274; Plants - 1573; Viruses - 0; Other Eukaryotes - 441 (source: NCBI BLink). & (gnl|cdd|71804 : 264.0) no description available & (reliability: 2216.0) & (original description: Putative FTIP1, Description = C2 calcium/lipid-binding plant phosphoribosyltransferase family protein, PFAM = PF08372;PF00168;PF00168;PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf06423_156059-162667' '(at5g47710 : 214.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G70790.1); Has 5137 Blast hits to 4266 proteins in 270 species: Archae - 0; Bacteria - 0; Metazoa - 2598; Fungi - 662; Plants - 1454; Viruses - 0; Other Eukaryotes - 423 (source: NCBI BLink). & (gnl|cdd|36248 : 180.0) no description available & (gnl|cdd|28912 : 84.3) no description available & (reliability: 428.0) & (original description: Putative CAR11, Description = Protein C2-DOMAIN ABA-RELATED 11, PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf06752_28486-31736' '(at5g12300 : 269.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT5G55530.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 538.0) & (original description: Putative ARALYDRAFT_488074, Description = C2 domain-containing protein, PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf07005_65307-165594' '(at1g48090 : 3303.0) calcium-dependent lipid-binding family protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Protein of unknown function DUF946 (InterPro:IPR009291), Vacuolar protein sorting-associated protein (InterPro:IPR009543), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973); BEST Arabidopsis thaliana protein match is: pleckstrin homology (PH) domain-containing protein (TAIR:AT4G17140.2); Has 2732 Blast hits to 1481 proteins in 212 species: Archae - 2; Bacteria - 15; Metazoa - 1181; Fungi - 466; Plants - 461; Viruses - 0; Other Eukaryotes - 607 (source: NCBI BLink). & (gnl|cdd|37020 : 301.0) no description available & (gnl|cdd|34648 : 114.0) no description available & (reliability: 6606.0) & (original description: Putative L484_026142, Description = Putative vacuolar protein sorting-associated protein 13A, PFAM = PF06101;PF06101;PF06398;PF16908;PF16909;PF16910;PF06650)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf07005_113623-124412' '(at1g48090 : 475.0) calcium-dependent lipid-binding family protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Protein of unknown function DUF946 (InterPro:IPR009291), Vacuolar protein sorting-associated protein (InterPro:IPR009543), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973); BEST Arabidopsis thaliana protein match is: pleckstrin homology (PH) domain-containing protein (TAIR:AT4G17140.2); Has 2732 Blast hits to 1481 proteins in 212 species: Archae - 2; Bacteria - 15; Metazoa - 1181; Fungi - 466; Plants - 461; Viruses - 0; Other Eukaryotes - 607 (source: NCBI BLink). & (gnl|cdd|37020 : 91.2) no description available & (reliability: 950.0) & (original description: Putative VPS13, Description = BnaC06g01590D protein, PFAM = )' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf07109_142824-155349' '(at2g20990 : 842.0) Encodes a plasma membrane localized protein with similarity to synaptotagmins, a class of membrane trafficking proteins. SYT1 is expressed in all tissues. Loss of function mutations show hypersensitivity to NaCl and electrolyte leakage from the plasma membrane. SYT1 also affects calcium dependent freezing tolerance. SYT1 probably plays a role in membrane repair such as membrane resealing after freezing induced damage. Regulates endocytosis endosome recycling at the plasma membrane, but not membrane traffic along the secretory pathway.; synaptotagmin A (SYTA); CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G20080.1). & (gnl|cdd|34643 : 180.0) no description available & (gnl|cdd|36246 : 95.2) no description available & (reliability: 1684.0) & (original description: Putative SYT1, Description = Synaptotagmin-1, PFAM = PF00168;PF00168;PF17047)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf07413_152878-155933' '(at1g07310 : 139.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT5G23950.1); Has 16203 Blast hits to 11144 proteins in 837 species: Archae - 8; Bacteria - 1073; Metazoa - 6146; Fungi - 3149; Plants - 3752; Viruses - 463; Other Eukaryotes - 1612 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative , Description = , PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf07778_22369-127432' '(at1g48090 : 3221.0) calcium-dependent lipid-binding family protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Protein of unknown function DUF946 (InterPro:IPR009291), Vacuolar protein sorting-associated protein (InterPro:IPR009543), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973); BEST Arabidopsis thaliana protein match is: pleckstrin homology (PH) domain-containing protein (TAIR:AT4G17140.2); Has 2732 Blast hits to 1481 proteins in 212 species: Archae - 2; Bacteria - 15; Metazoa - 1181; Fungi - 466; Plants - 461; Viruses - 0; Other Eukaryotes - 607 (source: NCBI BLink). & (gnl|cdd|37020 : 297.0) no description available & (gnl|cdd|34648 : 104.0) no description available & (reliability: 6442.0) & (original description: Putative RCOM_1002480, Description = Vacuolar protein sorting-associated protein, putative, PFAM = PF06398;PF16908;PF06650;PF16910;PF16909;PF06101;PF06101)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf07778_48829-78279' '(at1g48090 : 685.0) calcium-dependent lipid-binding family protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Protein of unknown function DUF946 (InterPro:IPR009291), Vacuolar protein sorting-associated protein (InterPro:IPR009543), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973); BEST Arabidopsis thaliana protein match is: pleckstrin homology (PH) domain-containing protein (TAIR:AT4G17140.2); Has 2732 Blast hits to 1481 proteins in 212 species: Archae - 2; Bacteria - 15; Metazoa - 1181; Fungi - 466; Plants - 461; Viruses - 0; Other Eukaryotes - 607 (source: NCBI BLink). & (gnl|cdd|37020 : 94.7) no description available & (reliability: 1370.0) & (original description: Putative At1g48090, Description = BnaC06g01590D protein, PFAM = PF16910)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf07914_118986-126125' '(at3g03680 : 1149.0) C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT1G74720.1); Has 14333 Blast hits to 8916 proteins in 1075 species: Archae - 59; Bacteria - 2640; Metazoa - 3947; Fungi - 1236; Plants - 1682; Viruses - 124; Other Eukaryotes - 4645 (source: NCBI BLink). & (gnl|cdd|71804 : 253.0) no description available & (reliability: 2298.0) & (original description: Putative FTIP1, Description = FT-interacting protein 1, PFAM = PF08372;PF00168;PF00168;PF00168;PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf08519_64880-73902' '(at3g19830 : 652.0) NTMC2T5.2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2404, transmembrane (InterPro:IPR019411), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: N-terminal-transmembrane-C2 domain type 5.1 (TAIR:AT1G50260.1); Has 1308 Blast hits to 1143 proteins in 177 species: Archae - 0; Bacteria - 2; Metazoa - 350; Fungi - 235; Plants - 647; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|34643 : 80.4) no description available & (reliability: 1304.0) & (original description: Putative BnaC05g32830D, Description = BnaC05g32830D protein, PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf08653_720786-724816' '(at3g17980 : 263.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G48590.2); Has 4930 Blast hits to 4266 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 2771; Fungi - 648; Plants - 1093; Viruses - 0; Other Eukaryotes - 418 (source: NCBI BLink). & (gnl|cdd|36248 : 220.0) no description available & (reliability: 526.0) & (original description: Putative CAR4, Description = Protein C2-DOMAIN ABA-RELATED 4, PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf09044_201778-206824' '(q7f9x0|erg3_orysa : 188.0) Elicitor-responsive protein 3 (16 kDa phloem protein) (RPP16) - Oryza sativa (Rice) & (at1g63220 : 173.0) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G55470.2); Has 271 Blast hits to 271 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 8; Plants - 249; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|36248 : 111.0) no description available & (reliability: 346.0) & (original description: Putative POPTR_0010s21060g, Description = C2 domain-containing family protein, PFAM = PF00168)' T '35.1.19' 'not assigned.no ontology.C2 domain-containing protein' 'niben101scf15235_8618-25527' '(at1g48090 : 152.0) calcium-dependent lipid-binding family protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Protein of unknown function DUF946 (InterPro:IPR009291), Vacuolar protein sorting-associated protein (InterPro:IPR009543), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973); BEST Arabidopsis thaliana protein match is: pleckstrin homology (PH) domain-containing protein (TAIR:AT4G17140.2); Has 2732 Blast hits to 1481 proteins in 212 species: Archae - 2; Bacteria - 15; Metazoa - 1181; Fungi - 466; Plants - 461; Viruses - 0; Other Eukaryotes - 607 (source: NCBI BLink). & (gnl|cdd|37020 : 83.1) no description available & (reliability: 304.0) & (original description: Putative At1g48090, Description = BnaC06g01590D protein, PFAM = PF12624)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'nbv0.3scaffold14958_19625-27862' '(at5g54650 : 598.0) Encodes a protein with similarity to formins that is involved in cytokinesis. Loss of function mutations exhibit delayed cellularization during endosperm development. FH5 is expressed in the endosperm and the protein localizes to the cell plate. FH5 was shown to be a maternally expressed imprinted gene.; formin homology5 (Fh5); CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (formin homology 2) family protein (TAIR:AT3G05470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85898 : 331.0) no description available & (gnl|cdd|37133 : 296.0) no description available & (reliability: 1196.0) & (original description: Putative AFH1, Description = Formin-like protein, PFAM = PF02181)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'nbv0.3scaffold52882_1-7881' '(at3g25500 : 579.0) Poly-L-proline-containing (PLP) protein that form part of the signal-transduction cascade that leads to rearrangement of the actin cytoskeleton. AFH1 is a nonprocessive formin that moves from the barbered end to the side of an actin filament after the nucleation event.; formin homology 1 (AFH1); FUNCTIONS IN: actin binding, protein binding, actin filament binding; INVOLVED IN: actin cytoskeleton organization; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (formin homology 2) family protein (TAIR:AT2G43800.1); Has 17339 Blast hits to 10806 proteins in 665 species: Archae - 8; Bacteria - 1434; Metazoa - 6069; Fungi - 2556; Plants - 3390; Viruses - 718; Other Eukaryotes - 3164 (source: NCBI BLink). & (gnl|cdd|47802 : 382.0) no description available & (gnl|cdd|37133 : 286.0) no description available & (reliability: 1158.0) & (original description: Putative AFH1, Description = Formin-like protein, PFAM = PF02181)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'nbv0.3scaffold80593_291-6887' '(at5g67470 : 594.0) formin homolog 6 (FH6); FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin homology 1 (TAIR:AT3G25500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85898 : 371.0) no description available & (gnl|cdd|37133 : 289.0) no description available & (reliability: 1188.0) & (original description: Putative BnaC03g48530D, Description = Formin-like protein, PFAM = PF02181)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'nbv0.3scaffold84042_103-4146' '(at1g49590 : 93.6) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, U1-C type (InterPro:IPR013085), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type matrin (InterPro:IPR000690). & (reliability: 187.2) & (original description: Putative ZOP1, Description = WW domain-binding protein 4, PFAM = )' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'nbv0.5scaffold182_804956-876056' '(at3g25500 : 621.0) Poly-L-proline-containing (PLP) protein that form part of the signal-transduction cascade that leads to rearrangement of the actin cytoskeleton. AFH1 is a nonprocessive formin that moves from the barbered end to the side of an actin filament after the nucleation event.; formin homology 1 (AFH1); FUNCTIONS IN: actin binding, protein binding, actin filament binding; INVOLVED IN: actin cytoskeleton organization; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (formin homology 2) family protein (TAIR:AT2G43800.1); Has 17339 Blast hits to 10806 proteins in 665 species: Archae - 8; Bacteria - 1434; Metazoa - 6069; Fungi - 2556; Plants - 3390; Viruses - 718; Other Eukaryotes - 3164 (source: NCBI BLink). & (gnl|cdd|47802 : 404.0) no description available & (gnl|cdd|37133 : 286.0) no description available & (reliability: 1242.0) & (original description: Putative AFH1, Description = Formin-like protein, PFAM = PF02181)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'nbv0.5scaffold1083_510963-518871' '(at5g67470 : 692.0) formin homolog 6 (FH6); FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin homology 1 (TAIR:AT3G25500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85898 : 381.0) no description available & (gnl|cdd|37133 : 300.0) no description available & (reliability: 1384.0) & (original description: Putative PGSC0003DMG400021449, Description = Formin-like protein, PFAM = PF02181)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'nbv0.5scaffold1295_37439-45454' '(at5g54650 : 549.0) Encodes a protein with similarity to formins that is involved in cytokinesis. Loss of function mutations exhibit delayed cellularization during endosperm development. FH5 is expressed in the endosperm and the protein localizes to the cell plate. FH5 was shown to be a maternally expressed imprinted gene.; formin homology5 (Fh5); CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (formin homology 2) family protein (TAIR:AT3G05470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85898 : 339.0) no description available & (gnl|cdd|37133 : 292.0) no description available & (reliability: 1098.0) & (original description: Putative AFH1, Description = Formin-like protein, PFAM = PF02181)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'nbv0.5scaffold1964_81703-89666' '(at3g25500 : 580.0) Poly-L-proline-containing (PLP) protein that form part of the signal-transduction cascade that leads to rearrangement of the actin cytoskeleton. AFH1 is a nonprocessive formin that moves from the barbered end to the side of an actin filament after the nucleation event.; formin homology 1 (AFH1); FUNCTIONS IN: actin binding, protein binding, actin filament binding; INVOLVED IN: actin cytoskeleton organization; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (formin homology 2) family protein (TAIR:AT2G43800.1); Has 17339 Blast hits to 10806 proteins in 665 species: Archae - 8; Bacteria - 1434; Metazoa - 6069; Fungi - 2556; Plants - 3390; Viruses - 718; Other Eukaryotes - 3164 (source: NCBI BLink). & (gnl|cdd|47802 : 381.0) no description available & (gnl|cdd|37133 : 287.0) no description available & (reliability: 1160.0) & (original description: Putative AFH1, Description = Formin-like protein, PFAM = PF02181)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'nbv0.5scaffold2131_335867-344898' '(at5g54650 : 528.0) Encodes a protein with similarity to formins that is involved in cytokinesis. Loss of function mutations exhibit delayed cellularization during endosperm development. FH5 is expressed in the endosperm and the protein localizes to the cell plate. FH5 was shown to be a maternally expressed imprinted gene.; formin homology5 (Fh5); CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (formin homology 2) family protein (TAIR:AT3G05470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85898 : 309.0) no description available & (gnl|cdd|37133 : 240.0) no description available & (reliability: 1056.0) & (original description: Putative FH3, Description = Formin-like protein 3, PFAM = PF02181)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'nbv0.5scaffold3002_127476-157890' '(at5g58160 : 586.0) actin binding; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Actin-binding FH2 (InterPro:IPR015425), Tensin phosphatase, C2 domain (InterPro:IPR014020); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (Formin Homology) protein (TAIR:AT2G25050.1); Has 66030 Blast hits to 44960 proteins in 1807 species: Archae - 80; Bacteria - 11670; Metazoa - 27723; Fungi - 9802; Plants - 6854; Viruses - 1874; Other Eukaryotes - 8027 (source: NCBI BLink). & (gnl|cdd|85898 : 379.0) no description available & (gnl|cdd|37133 : 242.0) no description available & (reliability: 1172.0) & (original description: Putative PGSC0003DMG400011179, Description = Formin-like protein, PFAM = PF10409;PF02181)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'nbv0.5scaffold3031_31432-37612' '(at5g67470 : 690.0) formin homolog 6 (FH6); FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin homology 1 (TAIR:AT3G25500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85898 : 367.0) no description available & (gnl|cdd|37133 : 296.0) no description available & (reliability: 1380.0) & (original description: Putative PGSC0003DMG400014869, Description = Formin-like protein, PFAM = PF02181)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'nbv0.5scaffold3081_264216-277452' '(at5g58160 : 508.0) actin binding; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Actin-binding FH2 (InterPro:IPR015425), Tensin phosphatase, C2 domain (InterPro:IPR014020); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (Formin Homology) protein (TAIR:AT2G25050.1); Has 66030 Blast hits to 44960 proteins in 1807 species: Archae - 80; Bacteria - 11670; Metazoa - 27723; Fungi - 9802; Plants - 6854; Viruses - 1874; Other Eukaryotes - 8027 (source: NCBI BLink). & (gnl|cdd|85898 : 351.0) no description available & (gnl|cdd|37133 : 246.0) no description available & (reliability: 1016.0) & (original description: Putative FH12, Description = Formin-like protein, PFAM = PF02181;PF10409)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'nbv0.5scaffold4877_10112-29145' '(at1g31810 : 665.0) Encodes the Type II Arabidopsis formin14. Interacts with microtubules and microfilaments to regulate cell division.; Formin Homology 14 (AFH14); FUNCTIONS IN: microtubule binding, actin binding, actin filament binding; INVOLVED IN: microsporogenesis; LOCATED IN: preprophase band, phragmoplast, spindle; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Actin-binding FH2 (InterPro:IPR015425), Tensin phosphatase, C2 domain (InterPro:IPR014020); BEST Arabidopsis thaliana protein match is: actin binding (TAIR:AT5G07740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85898 : 384.0) no description available & (gnl|cdd|37135 : 246.0) no description available & (reliability: 1330.0) & (original description: Putative FH12, Description = Formin-like protein 12, PFAM = PF02181;PF10409)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'niben044scf00006290ctg016_12242-20132' '(at5g54650 : 586.0) Encodes a protein with similarity to formins that is involved in cytokinesis. Loss of function mutations exhibit delayed cellularization during endosperm development. FH5 is expressed in the endosperm and the protein localizes to the cell plate. FH5 was shown to be a maternally expressed imprinted gene.; formin homology5 (Fh5); CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (formin homology 2) family protein (TAIR:AT3G05470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85898 : 339.0) no description available & (gnl|cdd|37133 : 287.0) no description available & (reliability: 1172.0) & (original description: Putative AFH1, Description = Formin-like protein, PFAM = PF02181)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'niben044scf00009017ctg003_1504-9583' '(at5g54650 : 553.0) Encodes a protein with similarity to formins that is involved in cytokinesis. Loss of function mutations exhibit delayed cellularization during endosperm development. FH5 is expressed in the endosperm and the protein localizes to the cell plate. FH5 was shown to be a maternally expressed imprinted gene.; formin homology5 (Fh5); CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (formin homology 2) family protein (TAIR:AT3G05470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85898 : 340.0) no description available & (gnl|cdd|37133 : 289.0) no description available & (reliability: 1106.0) & (original description: Putative AFH1, Description = Formin-like protein, PFAM = PF02181)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'niben044scf00019827ctg010_196-6792' '(at5g67470 : 704.0) formin homolog 6 (FH6); FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin homology 1 (TAIR:AT3G25500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85898 : 372.0) no description available & (gnl|cdd|37133 : 288.0) no description available & (reliability: 1408.0) & (original description: Putative FH6, Description = Formin-like protein 6, PFAM = PF02181)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'niben044scf00033808ctg005_22236-33530' '(at1g31810 : 669.0) Encodes the Type II Arabidopsis formin14. Interacts with microtubules and microfilaments to regulate cell division.; Formin Homology 14 (AFH14); FUNCTIONS IN: microtubule binding, actin binding, actin filament binding; INVOLVED IN: microsporogenesis; LOCATED IN: preprophase band, phragmoplast, spindle; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Actin-binding FH2 (InterPro:IPR015425), Tensin phosphatase, C2 domain (InterPro:IPR014020); BEST Arabidopsis thaliana protein match is: actin binding (TAIR:AT5G07740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85898 : 287.0) no description available & (gnl|cdd|37135 : 195.0) no description available & (reliability: 1338.0) & (original description: Putative BnaA09g25140D, Description = Formin-like protein, PFAM = PF10409;PF02181)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'niben044scf00038603ctg001_1748-10261' '(at5g54650 : 540.0) Encodes a protein with similarity to formins that is involved in cytokinesis. Loss of function mutations exhibit delayed cellularization during endosperm development. FH5 is expressed in the endosperm and the protein localizes to the cell plate. FH5 was shown to be a maternally expressed imprinted gene.; formin homology5 (Fh5); CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (formin homology 2) family protein (TAIR:AT3G05470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85898 : 340.0) no description available & (gnl|cdd|37133 : 260.0) no description available & (reliability: 1080.0) & (original description: Putative FH3, Description = Formin-like protein 3, PFAM = PF02181)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'niben044scf00047271ctg007_12689-20952' '(at5g54650 : 600.0) Encodes a protein with similarity to formins that is involved in cytokinesis. Loss of function mutations exhibit delayed cellularization during endosperm development. FH5 is expressed in the endosperm and the protein localizes to the cell plate. FH5 was shown to be a maternally expressed imprinted gene.; formin homology5 (Fh5); CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (formin homology 2) family protein (TAIR:AT3G05470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85898 : 329.0) no description available & (gnl|cdd|37133 : 295.0) no description available & (reliability: 1200.0) & (original description: Putative AFH1, Description = Formin-like protein, PFAM = PF02181)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'niben044scf00049950ctg001_1-3657' '(at1g49590 : 95.1) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, U1-C type (InterPro:IPR013085), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type matrin (InterPro:IPR000690). & (reliability: 190.2) & (original description: Putative ZOP1, Description = Zinc finger protein ZOP1, PFAM = )' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'niben044scf00054838ctg000_517-6556' '(at3g25500 : 629.0) Poly-L-proline-containing (PLP) protein that form part of the signal-transduction cascade that leads to rearrangement of the actin cytoskeleton. AFH1 is a nonprocessive formin that moves from the barbered end to the side of an actin filament after the nucleation event.; formin homology 1 (AFH1); FUNCTIONS IN: actin binding, protein binding, actin filament binding; INVOLVED IN: actin cytoskeleton organization; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (formin homology 2) family protein (TAIR:AT2G43800.1); Has 17339 Blast hits to 10806 proteins in 665 species: Archae - 8; Bacteria - 1434; Metazoa - 6069; Fungi - 2556; Plants - 3390; Viruses - 718; Other Eukaryotes - 3164 (source: NCBI BLink). & (gnl|cdd|47802 : 401.0) no description available & (gnl|cdd|37133 : 291.0) no description available & (reliability: 1258.0) & (original description: Putative AFH1, Description = Formin-like protein, PFAM = PF02181)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'niben044scf00061426ctg001_1-4643' '(at3g25500 : 476.0) Poly-L-proline-containing (PLP) protein that form part of the signal-transduction cascade that leads to rearrangement of the actin cytoskeleton. AFH1 is a nonprocessive formin that moves from the barbered end to the side of an actin filament after the nucleation event.; formin homology 1 (AFH1); FUNCTIONS IN: actin binding, protein binding, actin filament binding; INVOLVED IN: actin cytoskeleton organization; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (formin homology 2) family protein (TAIR:AT2G43800.1); Has 17339 Blast hits to 10806 proteins in 665 species: Archae - 8; Bacteria - 1434; Metazoa - 6069; Fungi - 2556; Plants - 3390; Viruses - 718; Other Eukaryotes - 3164 (source: NCBI BLink). & (gnl|cdd|85898 : 339.0) no description available & (gnl|cdd|37133 : 267.0) no description available & (reliability: 952.0) & (original description: Putative PGSC0003DMG400025208, Description = Formin-like protein, PFAM = PF02181)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'niben101scf00372_219116-226704' '(at1g49590 : 95.5) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, U1-C type (InterPro:IPR013085), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type matrin (InterPro:IPR000690). & (reliability: 191.0) & (original description: Putative ZOP1, Description = WW domain-binding protein 4, PFAM = )' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'niben101scf00774_128278-151808' '(at5g58160 : 592.0) actin binding; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Actin-binding FH2 (InterPro:IPR015425), Tensin phosphatase, C2 domain (InterPro:IPR014020); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (Formin Homology) protein (TAIR:AT2G25050.1); Has 66030 Blast hits to 44960 proteins in 1807 species: Archae - 80; Bacteria - 11670; Metazoa - 27723; Fungi - 9802; Plants - 6854; Viruses - 1874; Other Eukaryotes - 8027 (source: NCBI BLink). & (gnl|cdd|85898 : 375.0) no description available & (gnl|cdd|37133 : 245.0) no description available & (reliability: 1184.0) & (original description: Putative PGSC0003DMG400011179, Description = Formin-like protein, PFAM = PF02181;PF10409)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'niben101scf00991_803524-811646' '(at5g67470 : 700.0) formin homolog 6 (FH6); FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin homology 1 (TAIR:AT3G25500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85898 : 381.0) no description available & (gnl|cdd|37133 : 293.0) no description available & (reliability: 1400.0) & (original description: Putative FH6, Description = Formin-like protein 6, PFAM = PF02181)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'niben101scf01679_355650-369710' '(at5g54650 : 551.0) Encodes a protein with similarity to formins that is involved in cytokinesis. Loss of function mutations exhibit delayed cellularization during endosperm development. FH5 is expressed in the endosperm and the protein localizes to the cell plate. FH5 was shown to be a maternally expressed imprinted gene.; formin homology5 (Fh5); CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (formin homology 2) family protein (TAIR:AT3G05470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85898 : 333.0) no description available & (gnl|cdd|37133 : 269.0) no description available & (reliability: 1102.0) & (original description: Putative FH3, Description = Formin-like protein 3, PFAM = PF02181)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'niben101scf02093_251681-258198' '(at3g25500 : 620.0) Poly-L-proline-containing (PLP) protein that form part of the signal-transduction cascade that leads to rearrangement of the actin cytoskeleton. AFH1 is a nonprocessive formin that moves from the barbered end to the side of an actin filament after the nucleation event.; formin homology 1 (AFH1); FUNCTIONS IN: actin binding, protein binding, actin filament binding; INVOLVED IN: actin cytoskeleton organization; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (formin homology 2) family protein (TAIR:AT2G43800.1); Has 17339 Blast hits to 10806 proteins in 665 species: Archae - 8; Bacteria - 1434; Metazoa - 6069; Fungi - 2556; Plants - 3390; Viruses - 718; Other Eukaryotes - 3164 (source: NCBI BLink). & (gnl|cdd|47802 : 405.0) no description available & (gnl|cdd|37133 : 291.0) no description available & (reliability: 1240.0) & (original description: Putative AFH1, Description = Formin-like protein, PFAM = PF02181)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'niben101scf03471_9883-25439' '(at5g54650 : 608.0) Encodes a protein with similarity to formins that is involved in cytokinesis. Loss of function mutations exhibit delayed cellularization during endosperm development. FH5 is expressed in the endosperm and the protein localizes to the cell plate. FH5 was shown to be a maternally expressed imprinted gene.; formin homology5 (Fh5); CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (formin homology 2) family protein (TAIR:AT3G05470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85898 : 332.0) no description available & (gnl|cdd|37133 : 287.0) no description available & (reliability: 1216.0) & (original description: Putative AFH1, Description = Formin-like protein, PFAM = PF02181)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'niben101scf04350_13408-37604' '(at1g31810 : 667.0) Encodes the Type II Arabidopsis formin14. Interacts with microtubules and microfilaments to regulate cell division.; Formin Homology 14 (AFH14); FUNCTIONS IN: microtubule binding, actin binding, actin filament binding; INVOLVED IN: microsporogenesis; LOCATED IN: preprophase band, phragmoplast, spindle; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Actin-binding FH2 (InterPro:IPR015425), Tensin phosphatase, C2 domain (InterPro:IPR014020); BEST Arabidopsis thaliana protein match is: actin binding (TAIR:AT5G07740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85898 : 381.0) no description available & (gnl|cdd|37135 : 251.0) no description available & (reliability: 1334.0) & (original description: Putative FH19, Description = Formin-like protein 19, PFAM = PF02181;PF10409)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'niben101scf04627_312171-318384' '(at5g67470 : 685.0) formin homolog 6 (FH6); FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin homology 1 (TAIR:AT3G25500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85898 : 366.0) no description available & (gnl|cdd|37133 : 292.0) no description available & (reliability: 1370.0) & (original description: Putative PGSC0003DMG400014869, Description = Formin-like protein, PFAM = PF02181)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'niben101scf04690_354467-364624' '(at5g54650 : 564.0) Encodes a protein with similarity to formins that is involved in cytokinesis. Loss of function mutations exhibit delayed cellularization during endosperm development. FH5 is expressed in the endosperm and the protein localizes to the cell plate. FH5 was shown to be a maternally expressed imprinted gene.; formin homology5 (Fh5); CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (formin homology 2) family protein (TAIR:AT3G05470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85898 : 337.0) no description available & (gnl|cdd|37133 : 262.0) no description available & (reliability: 1128.0) & (original description: Putative FH3, Description = Formin-like protein 3, PFAM = PF02181)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'niben101scf05938_107458-113461' '(at1g49590 : 187.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, U1-C type (InterPro:IPR013085), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type matrin (InterPro:IPR000690). & (gnl|cdd|35372 : 129.0) no description available & (reliability: 374.0) & (original description: Putative ZOP1, Description = Zinc finger protein ZOP1, PFAM = PF06220)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'niben101scf05961_270836-277358' '(at3g25500 : 575.0) Poly-L-proline-containing (PLP) protein that form part of the signal-transduction cascade that leads to rearrangement of the actin cytoskeleton. AFH1 is a nonprocessive formin that moves from the barbered end to the side of an actin filament after the nucleation event.; formin homology 1 (AFH1); FUNCTIONS IN: actin binding, protein binding, actin filament binding; INVOLVED IN: actin cytoskeleton organization; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (formin homology 2) family protein (TAIR:AT2G43800.1); Has 17339 Blast hits to 10806 proteins in 665 species: Archae - 8; Bacteria - 1434; Metazoa - 6069; Fungi - 2556; Plants - 3390; Viruses - 718; Other Eukaryotes - 3164 (source: NCBI BLink). & (gnl|cdd|47802 : 387.0) no description available & (gnl|cdd|37133 : 281.0) no description available & (reliability: 1150.0) & (original description: Putative AFH1, Description = Formin-like protein, PFAM = PF02181)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'niben101scf10423_153545-163046' '(at5g54650 : 568.0) Encodes a protein with similarity to formins that is involved in cytokinesis. Loss of function mutations exhibit delayed cellularization during endosperm development. FH5 is expressed in the endosperm and the protein localizes to the cell plate. FH5 was shown to be a maternally expressed imprinted gene.; formin homology5 (Fh5); CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (formin homology 2) family protein (TAIR:AT3G05470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85898 : 336.0) no description available & (gnl|cdd|37133 : 269.0) no description available & (reliability: 1136.0) & (original description: Putative FH3, Description = Formin-like protein 3, PFAM = PF02181)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'niben101scf11991_28433-47839' '(at5g58160 : 540.0) actin binding; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Actin-binding FH2 (InterPro:IPR015425), Tensin phosphatase, C2 domain (InterPro:IPR014020); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (Formin Homology) protein (TAIR:AT2G25050.1); Has 66030 Blast hits to 44960 proteins in 1807 species: Archae - 80; Bacteria - 11670; Metazoa - 27723; Fungi - 9802; Plants - 6854; Viruses - 1874; Other Eukaryotes - 8027 (source: NCBI BLink). & (gnl|cdd|85898 : 381.0) no description available & (gnl|cdd|37133 : 246.0) no description available & (reliability: 1080.0) & (original description: Putative PGSC0003DMG400011179, Description = Formin-like protein, PFAM = PF02181;PF10409)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'niben101scf13703_308835-313791' '(at3g05470 : 583.0) Actin-binding FH2 (formin homology 2) family protein; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin homolog 6 (TAIR:AT5G67470.1); Has 5495 Blast hits to 4819 proteins in 357 species: Archae - 2; Bacteria - 168; Metazoa - 2550; Fungi - 658; Plants - 1088; Viruses - 235; Other Eukaryotes - 794 (source: NCBI BLink). & (gnl|cdd|85898 : 336.0) no description available & (gnl|cdd|37133 : 272.0) no description available & (reliability: 1166.0) & (original description: Putative FH11, Description = Formin-like protein 11, PFAM = PF02181)' T '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'niben101scf18308_142175-155949' '(at5g58160 : 508.0) actin binding; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Actin-binding FH2 (InterPro:IPR015425), Tensin phosphatase, C2 domain (InterPro:IPR014020); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (Formin Homology) protein (TAIR:AT2G25050.1); Has 66030 Blast hits to 44960 proteins in 1807 species: Archae - 80; Bacteria - 11670; Metazoa - 27723; Fungi - 9802; Plants - 6854; Viruses - 1874; Other Eukaryotes - 8027 (source: NCBI BLink). & (gnl|cdd|85898 : 331.0) no description available & (gnl|cdd|37133 : 228.0) no description available & (reliability: 1016.0) & (original description: Putative FH12, Description = Formin-like protein, PFAM = PF10409;PF02181)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'nbv0.3scaffold7014_8234-17936' '(at2g43160 : 455.0) ENTH/VHS family protein; FUNCTIONS IN: binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT3G59290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37267 : 225.0) no description available & (gnl|cdd|48665 : 210.0) no description available & (reliability: 910.0) & (original description: Putative epn2, Description = Epsin-2, PFAM = PF01417)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'nbv0.3scaffold9011_49888-51842' '(at1g03050 : 344.0) ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: N-terminal protein myristoylation, clathrin coat assembly; LOCATED IN: clathrin coat; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT4G02650.1); Has 1509 Blast hits to 1324 proteins in 217 species: Archae - 4; Bacteria - 48; Metazoa - 522; Fungi - 214; Plants - 422; Viruses - 12; Other Eukaryotes - 287 (source: NCBI BLink). & (gnl|cdd|35472 : 177.0) no description available & (gnl|cdd|87317 : 134.0) no description available & (reliability: 688.0) & (original description: Putative BnaC05g01680D, Description = BnaC05g01680D protein, PFAM = PF07651)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'nbv0.3scaffold9732_36589-47849' '(at2g43160 : 337.0) ENTH/VHS family protein; FUNCTIONS IN: binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT3G59290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37267 : 238.0) no description available & (gnl|cdd|48665 : 218.0) no description available & (reliability: 674.0) & (original description: Putative epn2, Description = Epsin-2, PFAM = PF01417)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'nbv0.3scaffold37330_6013-11347' '(at3g46540 : 134.0) ENTH/VHS family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT1G08670.1); Has 992 Blast hits to 992 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 538; Fungi - 205; Plants - 176; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative , Description = Epsin-3, PFAM = )' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'nbv0.3scaffold38648_12299-19936' '(at5g11710 : 439.0) EPSIN1 plays an important role in the vacuolar trafficking of soluble proteins at the trans-Golgi network via its interaction with gamma-ADR, VTI11, VSR1, and clathrin. Associated with actin filaments and with the Golgi complex. Expressed in most tissues.; ENTH/VHS family protein; FUNCTIONS IN: binding; INVOLVED IN: protein targeting to vacuole; LOCATED IN: thylakoid, actin filament, Golgi apparatus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT2G43160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37267 : 207.0) no description available & (gnl|cdd|48665 : 184.0) no description available & (reliability: 878.0) & (original description: Putative ENTH, Description = Clathrin interactor 1, PFAM = PF01417)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'nbv0.3scaffold53208_6639-14045' '(at5g11710 : 384.0) EPSIN1 plays an important role in the vacuolar trafficking of soluble proteins at the trans-Golgi network via its interaction with gamma-ADR, VTI11, VSR1, and clathrin. Associated with actin filaments and with the Golgi complex. Expressed in most tissues.; ENTH/VHS family protein; FUNCTIONS IN: binding; INVOLVED IN: protein targeting to vacuole; LOCATED IN: thylakoid, actin filament, Golgi apparatus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT2G43160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|48665 : 183.0) no description available & (gnl|cdd|37267 : 179.0) no description available & (reliability: 768.0) & (original description: Putative Epsin, Description = Clathrin interactor 1, PFAM = PF01417)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'nbv0.3scaffold68671_531-6996' '(at5g35200 : 406.0) ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT2G01600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35472 : 313.0) no description available & (gnl|cdd|87317 : 238.0) no description available & (reliability: 812.0) & (original description: Putative At5g35200, Description = Putative clathrin assembly protein At5g35200, PFAM = PF07651)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'nbv0.5scaffold264_255420-259891' '(at1g05020 : 455.0) ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: clathrin coat; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT4G32285.2); Has 663 Blast hits to 661 proteins in 84 species: Archae - 0; Bacteria - 2; Metazoa - 204; Fungi - 47; Plants - 394; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|35472 : 289.0) no description available & (gnl|cdd|87317 : 257.0) no description available & (reliability: 910.0) & (original description: Putative AP180, Description = Clathrin assembly family protein, PFAM = PF07651)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'nbv0.5scaffold3903_12786-16720' '(at2g25430 : 788.0) epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT4G32285.2); Has 1786 Blast hits to 1328 proteins in 221 species: Archae - 4; Bacteria - 135; Metazoa - 673; Fungi - 126; Plants - 678; Viruses - 2; Other Eukaryotes - 168 (source: NCBI BLink). & (gnl|cdd|35472 : 383.0) no description available & (gnl|cdd|87317 : 255.0) no description available & (reliability: 1576.0) & (original description: Putative At2g25430, Description = Putative clathrin assembly protein At2g25430, PFAM = PF07651)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'nbv0.5scaffold6616_33723-38426' '(at5g11710 : 245.0) EPSIN1 plays an important role in the vacuolar trafficking of soluble proteins at the trans-Golgi network via its interaction with gamma-ADR, VTI11, VSR1, and clathrin. Associated with actin filaments and with the Golgi complex. Expressed in most tissues.; ENTH/VHS family protein; FUNCTIONS IN: binding; INVOLVED IN: protein targeting to vacuole; LOCATED IN: thylakoid, actin filament, Golgi apparatus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT2G43160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37267 : 180.0) no description available & (gnl|cdd|48665 : 176.0) no description available & (reliability: 490.0) & (original description: Putative clint1, Description = Clathrin interactor 1, PFAM = PF01417)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben044scf00000030ctg016_1-8001' '(at2g43160 : 342.0) ENTH/VHS family protein; FUNCTIONS IN: binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT3G59290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37267 : 223.0) no description available & (gnl|cdd|48665 : 216.0) no description available & (reliability: 684.0) & (original description: Putative epn2, Description = Epsin-2, PFAM = PF01417)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben044scf00019006ctg004_1262-5339' '(at1g03050 : 537.0) ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: N-terminal protein myristoylation, clathrin coat assembly; LOCATED IN: clathrin coat; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT4G02650.1); Has 1509 Blast hits to 1324 proteins in 217 species: Archae - 4; Bacteria - 48; Metazoa - 522; Fungi - 214; Plants - 422; Viruses - 12; Other Eukaryotes - 287 (source: NCBI BLink). & (gnl|cdd|35472 : 338.0) no description available & (gnl|cdd|87317 : 268.0) no description available & (reliability: 1074.0) & (original description: Putative At1g03050, Description = Putative clathrin assembly protein At1g03050, PFAM = PF07651)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben044scf00030464ctg001_244-11532' '(at2g01600 : 674.0) ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: N-terminal protein myristoylation, clathrin coat assembly; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT1G14910.1); Has 1020 Blast hits to 994 proteins in 190 species: Archae - 0; Bacteria - 14; Metazoa - 316; Fungi - 202; Plants - 440; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|35472 : 446.0) no description available & (gnl|cdd|87317 : 316.0) no description available & (reliability: 1348.0) & (original description: Putative At2g01600, Description = Putative clathrin assembly protein At2g01600, PFAM = PF07651)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben044scf00060223ctg001_3141-10776' '(at5g11710 : 428.0) EPSIN1 plays an important role in the vacuolar trafficking of soluble proteins at the trans-Golgi network via its interaction with gamma-ADR, VTI11, VSR1, and clathrin. Associated with actin filaments and with the Golgi complex. Expressed in most tissues.; ENTH/VHS family protein; FUNCTIONS IN: binding; INVOLVED IN: protein targeting to vacuole; LOCATED IN: thylakoid, actin filament, Golgi apparatus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT2G43160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37267 : 213.0) no description available & (gnl|cdd|48665 : 186.0) no description available & (reliability: 856.0) & (original description: Putative EPSIN1, Description = Clathrin interactor EPSIN 1, PFAM = PF01417)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101ctg15209_307-3668' '(at3g46540 : 125.0) ENTH/VHS family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT1G08670.1); Has 992 Blast hits to 992 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 538; Fungi - 205; Plants - 176; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101ctg16103_959-6923' '(at4g25940 : 568.0) ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: clathrin coat; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT5G57200.1); Has 8063 Blast hits to 4237 proteins in 339 species: Archae - 25; Bacteria - 270; Metazoa - 3478; Fungi - 641; Plants - 597; Viruses - 312; Other Eukaryotes - 2740 (source: NCBI BLink). & (gnl|cdd|35472 : 424.0) no description available & (gnl|cdd|87317 : 292.0) no description available & (reliability: 1136.0) & (original description: Putative At5g57200, Description = Putative clathrin assembly protein At5g57200, PFAM = PF07651)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf00085_405432-420513' '(at5g11710 : 416.0) EPSIN1 plays an important role in the vacuolar trafficking of soluble proteins at the trans-Golgi network via its interaction with gamma-ADR, VTI11, VSR1, and clathrin. Associated with actin filaments and with the Golgi complex. Expressed in most tissues.; ENTH/VHS family protein; FUNCTIONS IN: binding; INVOLVED IN: protein targeting to vacuole; LOCATED IN: thylakoid, actin filament, Golgi apparatus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT2G43160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37267 : 189.0) no description available & (gnl|cdd|48665 : 169.0) no description available & (reliability: 832.0) & (original description: Putative Epsin, Description = Clathrin interactor EPSIN 2, PFAM = PF01417;PF01417)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf00257_75134-79592' '(at2g25430 : 729.0) epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT4G32285.2); Has 1786 Blast hits to 1328 proteins in 221 species: Archae - 4; Bacteria - 135; Metazoa - 673; Fungi - 126; Plants - 678; Viruses - 2; Other Eukaryotes - 168 (source: NCBI BLink). & (gnl|cdd|35472 : 377.0) no description available & (gnl|cdd|87317 : 249.0) no description available & (reliability: 1458.0) & (original description: Putative At2g25430, Description = Putative clathrin assembly protein At2g25430, PFAM = PF07651)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf00416_595741-603921' '(at5g57200 : 563.0) ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: N-terminal protein myristoylation, clathrin coat assembly; LOCATED IN: clathrin coat; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT4G25940.1); Has 13426 Blast hits to 6658 proteins in 473 species: Archae - 43; Bacteria - 452; Metazoa - 5386; Fungi - 950; Plants - 797; Viruses - 658; Other Eukaryotes - 5140 (source: NCBI BLink). & (gnl|cdd|35472 : 421.0) no description available & (gnl|cdd|87317 : 295.0) no description available & (reliability: 1126.0) & (original description: Putative Os06g0699800, Description = Os06g0699800 protein, PFAM = PF07651)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf00811_442573-447044' '(at1g05020 : 461.0) ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: clathrin coat; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT4G32285.2); Has 663 Blast hits to 661 proteins in 84 species: Archae - 0; Bacteria - 2; Metazoa - 204; Fungi - 47; Plants - 394; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|35472 : 295.0) no description available & (gnl|cdd|87317 : 256.0) no description available & (reliability: 922.0) & (original description: Putative AP180, Description = AP180 N-terminal homology (ANTH) domain-containing protein, PFAM = PF07651)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf00927_1332255-1335442' '(at1g25240 : 325.0) ENTH/VHS/GAT family protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: clathrin coat, mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT1G68110.1); Has 471 Blast hits to 436 proteins in 54 species: Archae - 1; Bacteria - 2; Metazoa - 90; Fungi - 7; Plants - 370; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|35472 : 215.0) no description available & (gnl|cdd|87317 : 187.0) no description available & (reliability: 650.0) & (original description: Putative At1g25240, Description = Putative clathrin assembly protein At1g25240, PFAM = PF07651)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf01066_135807-147193' '(at2g43160 : 373.0) ENTH/VHS family protein; FUNCTIONS IN: binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT3G59290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37267 : 237.0) no description available & (gnl|cdd|48665 : 218.0) no description available & (reliability: 746.0) & (original description: Putative epn2, Description = Epsin-2, PFAM = PF01417)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf01139_100586-103656' '(at4g40080 : 320.0) ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT5G10410.1); Has 479 Blast hits to 479 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 157; Fungi - 0; Plants - 318; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|35472 : 185.0) no description available & (gnl|cdd|48660 : 80.3) no description available & (reliability: 640.0) & (original description: Putative BnaC03g61020D, Description = BnaC03g61020D protein, PFAM = PF07651)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf01141_237697-241876' '(at4g40080 : 333.0) ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT5G10410.1); Has 479 Blast hits to 479 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 157; Fungi - 0; Plants - 318; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|35472 : 179.0) no description available & (gnl|cdd|48660 : 83.0) no description available & (reliability: 666.0) & (original description: Putative At4g40080, Description = Putative clathrin assembly protein At4g40080, PFAM = PF07651)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf01218_130943-135013' '(at2g25430 : 792.0) epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT4G32285.2); Has 1786 Blast hits to 1328 proteins in 221 species: Archae - 4; Bacteria - 135; Metazoa - 673; Fungi - 126; Plants - 678; Viruses - 2; Other Eukaryotes - 168 (source: NCBI BLink). & (gnl|cdd|35472 : 389.0) no description available & (gnl|cdd|87317 : 260.0) no description available & (reliability: 1584.0) & (original description: Putative At2g25430, Description = Putative clathrin assembly protein At2g25430, PFAM = PF07651)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf01894_407751-411793' '(at1g03050 : 535.0) ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: N-terminal protein myristoylation, clathrin coat assembly; LOCATED IN: clathrin coat; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT4G02650.1); Has 1509 Blast hits to 1324 proteins in 217 species: Archae - 4; Bacteria - 48; Metazoa - 522; Fungi - 214; Plants - 422; Viruses - 12; Other Eukaryotes - 287 (source: NCBI BLink). & (gnl|cdd|35472 : 331.0) no description available & (gnl|cdd|87317 : 264.0) no description available & (reliability: 1070.0) & (original description: Putative At1g03050, Description = Putative clathrin assembly protein At1g03050, PFAM = PF07651)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf02042_38850-48558' '(at2g43160 : 454.0) ENTH/VHS family protein; FUNCTIONS IN: binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT3G59290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37267 : 228.0) no description available & (gnl|cdd|48665 : 209.0) no description available & (reliability: 908.0) & (original description: Putative EPSIN2, Description = Clathrin interactor EPSIN 2, PFAM = PF01417)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf02467_225723-233005' '(at5g35200 : 601.0) ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT2G01600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35472 : 383.0) no description available & (gnl|cdd|87317 : 272.0) no description available & (reliability: 1202.0) & (original description: Putative At5g35200, Description = Putative clathrin assembly protein At5g35200, PFAM = PF07651)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf02517_1688865-1691791' '(at3g46540 : 199.0) ENTH/VHS family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT1G08670.1); Has 992 Blast hits to 992 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 538; Fungi - 205; Plants - 176; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|37267 : 135.0) no description available & (gnl|cdd|48665 : 122.0) no description available & (reliability: 398.0) & (original description: Putative , Description = Clathrin interactor EPSIN 1, PFAM = PF01417)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf03279_300582-304599' '(at1g03050 : 543.0) ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: N-terminal protein myristoylation, clathrin coat assembly; LOCATED IN: clathrin coat; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT4G02650.1); Has 1509 Blast hits to 1324 proteins in 217 species: Archae - 4; Bacteria - 48; Metazoa - 522; Fungi - 214; Plants - 422; Viruses - 12; Other Eukaryotes - 287 (source: NCBI BLink). & (gnl|cdd|35472 : 336.0) no description available & (gnl|cdd|87317 : 275.0) no description available & (reliability: 1086.0) & (original description: Putative At1g03050, Description = Putative clathrin assembly protein At1g03050, PFAM = PF07651)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf04455_318412-321365' '(at4g40080 : 168.0) ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT5G10410.1); Has 479 Blast hits to 479 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 157; Fungi - 0; Plants - 318; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|35472 : 144.0) no description available & (reliability: 336.0) & (original description: Putative glysoja_032229, Description = Putative clathrin assembly protein, PFAM = PF07651)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf04675_132870-140709' '(at5g11710 : 433.0) EPSIN1 plays an important role in the vacuolar trafficking of soluble proteins at the trans-Golgi network via its interaction with gamma-ADR, VTI11, VSR1, and clathrin. Associated with actin filaments and with the Golgi complex. Expressed in most tissues.; ENTH/VHS family protein; FUNCTIONS IN: binding; INVOLVED IN: protein targeting to vacuole; LOCATED IN: thylakoid, actin filament, Golgi apparatus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT2G43160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37267 : 212.0) no description available & (gnl|cdd|48665 : 184.0) no description available & (reliability: 866.0) & (original description: Putative EPSIN1, Description = Clathrin interactor EPSIN 1, PFAM = PF01417)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf05109_246854-253081' '(at5g35200 : 397.0) ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT2G01600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35472 : 313.0) no description available & (gnl|cdd|87317 : 240.0) no description available & (reliability: 794.0) & (original description: Putative pco081818, Description = Putative clathrin assembly protein, PFAM = PF07651)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf05720_675924-679765' '(at4g32285 : 656.0) ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related (TAIR:AT2G25430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35472 : 346.0) no description available & (gnl|cdd|87317 : 243.0) no description available & (reliability: 1312.0) & (original description: Putative At4g32285, Description = Probable clathrin assembly protein At4g32285, PFAM = PF07651)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf05804_146922-154217' '(at5g35200 : 601.0) ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT2G01600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35472 : 388.0) no description available & (gnl|cdd|87317 : 281.0) no description available & (reliability: 1202.0) & (original description: Putative At5g35200, Description = Putative clathrin assembly protein At5g35200, PFAM = PF07651)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf06782_291922-297349' '(at3g46540 : 120.0) ENTH/VHS family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT1G08670.1); Has 992 Blast hits to 992 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 538; Fungi - 205; Plants - 176; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative , Description = Epsin-3, PFAM = )' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf07839_4639-7835' '(at1g25240 : 327.0) ENTH/VHS/GAT family protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: clathrin coat, mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT1G68110.1); Has 471 Blast hits to 436 proteins in 54 species: Archae - 1; Bacteria - 2; Metazoa - 90; Fungi - 7; Plants - 370; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|35472 : 219.0) no description available & (gnl|cdd|87317 : 184.0) no description available & (reliability: 654.0) & (original description: Putative At1g25240, Description = Putative clathrin assembly protein At1g25240, PFAM = PF07651)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf09357_45864-55862' '(at2g43160 : 426.0) ENTH/VHS family protein; FUNCTIONS IN: binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT3G59290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37267 : 226.0) no description available & (gnl|cdd|48665 : 209.0) no description available & (reliability: 852.0) & (original description: Putative EPSIN2, Description = Clathrin interactor EPSIN 2, PFAM = PF01417)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf09368_622483-625505' '(gnl|cdd|35472 : 147.0) no description available & (at4g40080 : 144.0) ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT5G10410.1); Has 479 Blast hits to 479 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 157; Fungi - 0; Plants - 318; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative glysoja_032229, Description = Putative clathrin assembly protein, PFAM = PF07651)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf09513_141643-155880' '(at5g11710 : 448.0) EPSIN1 plays an important role in the vacuolar trafficking of soluble proteins at the trans-Golgi network via its interaction with gamma-ADR, VTI11, VSR1, and clathrin. Associated with actin filaments and with the Golgi complex. Expressed in most tissues.; ENTH/VHS family protein; FUNCTIONS IN: binding; INVOLVED IN: protein targeting to vacuole; LOCATED IN: thylakoid, actin filament, Golgi apparatus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT2G43160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37267 : 199.0) no description available & (gnl|cdd|48665 : 189.0) no description available & (reliability: 896.0) & (original description: Putative EPSIN1, Description = Clathrin interactor EPSIN 1, PFAM = PF01417)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf09998_73863-98953' '(at1g05020 : 425.0) ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: clathrin coat; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT4G32285.2); Has 663 Blast hits to 661 proteins in 84 species: Archae - 0; Bacteria - 2; Metazoa - 204; Fungi - 47; Plants - 394; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|35472 : 265.0) no description available & (gnl|cdd|87317 : 254.0) no description available & (reliability: 850.0) & (original description: Putative AP180, Description = Clathrin assembly family protein, PFAM = PF07651)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf09998_94647-99073' '(at1g05020 : 475.0) ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: clathrin coat; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT4G32285.2); Has 663 Blast hits to 661 proteins in 84 species: Archae - 0; Bacteria - 2; Metazoa - 204; Fungi - 47; Plants - 394; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|35472 : 304.0) no description available & (gnl|cdd|87317 : 274.0) no description available & (reliability: 950.0) & (original description: Putative AP180, Description = AP180 N-terminal homology (ANTH) domain-containing protein, PFAM = PF07651)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf12585_13795-16967' '(at1g25240 : 290.0) ENTH/VHS/GAT family protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: clathrin coat, mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT1G68110.1); Has 471 Blast hits to 436 proteins in 54 species: Archae - 1; Bacteria - 2; Metazoa - 90; Fungi - 7; Plants - 370; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|35472 : 204.0) no description available & (gnl|cdd|87317 : 168.0) no description available & (reliability: 580.0) & (original description: Putative PGSC0003DMG400029445, Description = BnaC05g50410D protein, PFAM = PF07651)' T '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'niben101scf17524_22048-33469' '(at2g01600 : 675.0) ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: N-terminal protein myristoylation, clathrin coat assembly; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT1G14910.1); Has 1020 Blast hits to 994 proteins in 190 species: Archae - 0; Bacteria - 14; Metazoa - 316; Fungi - 202; Plants - 440; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|35472 : 444.0) no description available & (gnl|cdd|87317 : 315.0) no description available & (reliability: 1350.0) & (original description: Putative At2g01600, Description = Putative clathrin assembly protein At2g01600, PFAM = PF07651)' T '35.1.22' 'not assigned.no ontology.late embryogenesis abundant domain-containing protein' 'niben044scf00010846ctg007_9430-13294' '(gnl|cdd|38097 : 158.0) no description available & (at1g72100 : 128.0) late embryogenesis abundant domain-containing protein / LEA domain-containing protein; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 4 (InterPro:IPR004238); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (LEA) family protein (TAIR:AT1G22600.1); Has 5957 Blast hits to 3336 proteins in 883 species: Archae - 38; Bacteria - 2417; Metazoa - 675; Fungi - 389; Plants - 1426; Viruses - 20; Other Eukaryotes - 992 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative LEA, Description = Late embryogenesis abundant protein (LEA) family protein, PFAM = PF13664)' T '35.1.22' 'not assigned.no ontology.late embryogenesis abundant domain-containing protein' 'niben044scf00013713ctg004_435-4844' '(at1g72100 : 211.0) late embryogenesis abundant domain-containing protein / LEA domain-containing protein; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 4 (InterPro:IPR004238); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (LEA) family protein (TAIR:AT1G22600.1); Has 5957 Blast hits to 3336 proteins in 883 species: Archae - 38; Bacteria - 2417; Metazoa - 675; Fungi - 389; Plants - 1426; Viruses - 20; Other Eukaryotes - 992 (source: NCBI BLink). & (gnl|cdd|38097 : 167.0) no description available & (reliability: 422.0) & (original description: Putative LEA, Description = Late embryogenesis abundant protein, PFAM = PF13664)' T '35.1.22' 'not assigned.no ontology.late embryogenesis abundant domain-containing protein' 'niben101scf00343_939656-944071' '(gnl|cdd|38097 : 168.0) no description available & (at1g22600 : 159.0) Late embryogenesis abundant protein (LEA) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, embryo, sperm cell, hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: late embryogenesis abundant domain-containing protein / LEA domain-containing protein (TAIR:AT1G72100.1); Has 169 Blast hits to 166 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 72; Fungi - 8; Plants - 85; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative LEA, Description = Late embryogenesis abundant protein, PFAM = PF13664)' T '35.1.22' 'not assigned.no ontology.late embryogenesis abundant domain-containing protein' 'niben101scf08441_18819-22949' '(at1g72100 : 165.0) late embryogenesis abundant domain-containing protein / LEA domain-containing protein; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 4 (InterPro:IPR004238); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (LEA) family protein (TAIR:AT1G22600.1); Has 5957 Blast hits to 3336 proteins in 883 species: Archae - 38; Bacteria - 2417; Metazoa - 675; Fungi - 389; Plants - 1426; Viruses - 20; Other Eukaryotes - 992 (source: NCBI BLink). & (gnl|cdd|38097 : 159.0) no description available & (reliability: 330.0) & (original description: Putative LEA, Description = Late embryogenesis abundant protein, PFAM = PF13664)' T '35.1.23' 'not assigned.no ontology.aconitase C-terminal domain-containing protein' '' '' '35.1.24' 'not assigned.no ontology.paired amphipathic helix repeat-containing protein' '' '' '35.1.25' 'not assigned.no ontology.paired amphipathic helix repeat-containing protein' 'nbv0.3scaffold5956_7553-19534' '(at1g70060 : 1072.0) Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190).; SIN3-like 4 (SNL4); INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 3 (TAIR:AT1G24190.2); Has 2571 Blast hits to 1108 proteins in 232 species: Archae - 4; Bacteria - 56; Metazoa - 1028; Fungi - 808; Plants - 415; Viruses - 14; Other Eukaryotes - 246 (source: NCBI BLink). & (gnl|cdd|39405 : 224.0) no description available & (gnl|cdd|35161 : 172.0) no description available & (reliability: 2144.0) & (original description: Putative SNL4, Description = Paired amphipathic helix protein Sin3-like 4, PFAM = PF16879;PF08295;PF02671;PF02671;PF02671)' T '35.1.25' 'not assigned.no ontology.paired amphipathic helix repeat-containing protein' 'niben044scf00044922ctg000_1849-5166' '(at1g70060 : 85.9) Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190).; SIN3-like 4 (SNL4); INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 3 (TAIR:AT1G24190.2); Has 2571 Blast hits to 1108 proteins in 232 species: Archae - 4; Bacteria - 56; Metazoa - 1028; Fungi - 808; Plants - 415; Viruses - 14; Other Eukaryotes - 246 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative SIN3, Description = Paired amphipathic helix protein Sin3-like 4, PFAM = PF02671)' T '35.1.25' 'not assigned.no ontology.paired amphipathic helix repeat-containing protein' 'niben044scf00053274ctg003_2998-15347' '(at1g24190 : 1095.0) Enhances AtERF7-mediated transcriptional repression. RNAi lines show ABA hypersensitivity. Interacts with ERF7 and HDA19.; SIN3-like 3 (SNL3); FUNCTIONS IN: transcription repressor activity; INVOLVED IN: negative regulation of transcription, regulation of transcription, DNA-dependent, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 4 (TAIR:AT1G70060.1). & (gnl|cdd|39405 : 226.0) no description available & (gnl|cdd|35161 : 174.0) no description available & (reliability: 2190.0) & (original description: Putative SNL4, Description = Paired amphipathic helix protein Sin3-like 4, PFAM = PF16879;PF08295;PF02671;PF02671;PF02671)' T '35.1.25' 'not assigned.no ontology.paired amphipathic helix repeat-containing protein' 'niben101scf01402_122772-126083' '(at1g70060 : 90.1) Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190).; SIN3-like 4 (SNL4); INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 3 (TAIR:AT1G24190.2); Has 2571 Blast hits to 1108 proteins in 232 species: Archae - 4; Bacteria - 56; Metazoa - 1028; Fungi - 808; Plants - 415; Viruses - 14; Other Eukaryotes - 246 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative SIN3, Description = WRKY domain class transcription factor, PFAM = PF02671)' T '35.1.25' 'not assigned.no ontology.paired amphipathic helix repeat-containing protein' 'niben101scf02012_63115-75285' '(at1g24190 : 1084.0) Enhances AtERF7-mediated transcriptional repression. RNAi lines show ABA hypersensitivity. Interacts with ERF7 and HDA19.; SIN3-like 3 (SNL3); FUNCTIONS IN: transcription repressor activity; INVOLVED IN: negative regulation of transcription, regulation of transcription, DNA-dependent, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 4 (TAIR:AT1G70060.1). & (gnl|cdd|39405 : 224.0) no description available & (gnl|cdd|35161 : 172.0) no description available & (reliability: 2168.0) & (original description: Putative SNL4, Description = Paired amphipathic helix protein Sin3-like 4, PFAM = PF08295;PF02671;PF02671;PF02671;PF16879)' T '35.1.25' 'not assigned.no ontology.paired amphipathic helix repeat-containing protein' 'niben101scf03106_239124-251160' '(at1g24190 : 1089.0) Enhances AtERF7-mediated transcriptional repression. RNAi lines show ABA hypersensitivity. Interacts with ERF7 and HDA19.; SIN3-like 3 (SNL3); FUNCTIONS IN: transcription repressor activity; INVOLVED IN: negative regulation of transcription, regulation of transcription, DNA-dependent, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 4 (TAIR:AT1G70060.1). & (gnl|cdd|39405 : 226.0) no description available & (gnl|cdd|35161 : 175.0) no description available & (reliability: 2178.0) & (original description: Putative SNL3, Description = Paired amphipathic helix protein Sin3-like 3, PFAM = PF16879;PF02671;PF02671;PF02671;PF08295)' T '35.1.26' 'not assigned.no ontology.DC1 domain containing protein' 'nbv0.3scaffold19430_24438-27181' '(at2g17740 : 121.0) Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G44370.1); Has 1973 Blast hits to 753 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 1961; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative PGSC0003DMG400006321, Description = , PFAM = PF03107;PF03107;PF03107)' T '35.1.26' 'not assigned.no ontology.DC1 domain containing protein' 'nbv0.3scaffold28997_1-1603' '(at2g44380 : 129.0) Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G43520.1); Has 1997 Blast hits to 742 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 1986; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative PGSC0003DMG400006321, Description = , PFAM = PF03107;PF03107;PF03107)' T '35.1.26' 'not assigned.no ontology.DC1 domain containing protein' 'nbv0.3scaffold41907_250-4513' '(at2g37820 : 203.0) Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G37800.1); Has 2103 Blast hits to 832 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 14; Plants - 1982; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 406.0) & (original description: Putative BnaC03g72080D, Description = BnaC03g72080D protein, PFAM = PF03107;PF03107;PF03107)' T '35.1.26' 'not assigned.no ontology.DC1 domain containing protein' 'nbv0.3scaffold62976_7501-10268' '(at2g44380 : 134.0) Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G43520.1); Has 1997 Blast hits to 742 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 1986; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative PGSC0003DMG400006321, Description = , PFAM = PF03107;PF03107;PF03107)' T '35.1.26' 'not assigned.no ontology.DC1 domain containing protein' 'nbv0.3scaffold63840_7694-10425' '(at2g28270 : 94.0) Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G44380.1); Has 1990 Blast hits to 716 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1986; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative PGSC0003DMG400006321, Description = , PFAM = PF03107;PF03107)' T '35.1.26' 'not assigned.no ontology.DC1 domain containing protein' 'nbv0.5scaffold1281_101016-103786' '(at2g44380 : 121.0) Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G43520.1); Has 1997 Blast hits to 742 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 1986; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative PGSC0003DMG400006321, Description = , PFAM = PF03107;PF03107;PF03107)' T '35.1.26' 'not assigned.no ontology.DC1 domain containing protein' 'niben044scf00003211ctg002_7507-10079' '(at2g44380 : 167.0) Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G43520.1); Has 1997 Blast hits to 742 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 1986; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative At2g44370, Description = Cysteine/histidine-rich C1 domain-containing protein, PFAM = PF03107;PF03107;PF03107)' T '35.1.26' 'not assigned.no ontology.DC1 domain containing protein' 'niben044scf00018650ctg010_2863-5186' '(at1g20990 : 215.0) Cysteine/Histidine-rich C1 domain family protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G16050.1); Has 1603 Blast hits to 716 proteins in 35 species: Archae - 0; Bacteria - 2; Metazoa - 20; Fungi - 0; Plants - 1573; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 430.0) & (original description: Putative BnaC05g16280D, Description = BnaC05g16280D protein, PFAM = PF03107;PF03107;PF03107)' T '35.1.26' 'not assigned.no ontology.DC1 domain containing protein' 'niben044scf00041739ctg000_1125-6438' '(at2g16050 : 354.0) Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT1G20990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 708.0) & (original description: Putative At2g16050, Description = Putative uncharacterized protein At2g16050, PFAM = PF03107;PF03107)' T '35.1.26' 'not assigned.no ontology.DC1 domain containing protein' 'niben101scf00539_564199-572975' '(at1g60420 : 285.0) Reduce transmission through pollen.; DC1 domain-containing protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: response to cadmium ion, pollen tube growth, pollen tube guidance; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), C1-like (InterPro:IPR011424), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: protein kinase C-like zinc finger protein (TAIR:AT4G31240.2); Has 6688 Blast hits to 3903 proteins in 794 species: Archae - 4; Bacteria - 4185; Metazoa - 634; Fungi - 4; Plants - 553; Viruses - 0; Other Eukaryotes - 1308 (source: NCBI BLink). & (gnl|cdd|48558 : 159.0) no description available & (gnl|cdd|37712 : 121.0) no description available & (reliability: 570.0) & (original description: Putative Os01g0794400, Description = Probable nucleoredoxin 2, PFAM = PF13905;PF13905)' T '35.1.26' 'not assigned.no ontology.DC1 domain containing protein' 'niben101scf00539_564217-573331' '(at1g60420 : 277.0) Reduce transmission through pollen.; DC1 domain-containing protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: response to cadmium ion, pollen tube growth, pollen tube guidance; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), C1-like (InterPro:IPR011424), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: protein kinase C-like zinc finger protein (TAIR:AT4G31240.2); Has 6688 Blast hits to 3903 proteins in 794 species: Archae - 4; Bacteria - 4185; Metazoa - 634; Fungi - 4; Plants - 553; Viruses - 0; Other Eukaryotes - 1308 (source: NCBI BLink). & (gnl|cdd|48558 : 160.0) no description available & (gnl|cdd|37712 : 121.0) no description available & (reliability: 554.0) & (original description: Putative Os01g0794400, Description = Probable nucleoredoxin 2, PFAM = PF13905;PF13905)' T '35.1.26' 'not assigned.no ontology.DC1 domain containing protein' 'niben101scf00557_381530-384273' '(at2g44370 : 101.0) Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G17740.1); Has 2013 Blast hits to 769 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 7; Plants - 1977; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative PGSC0003DMG400006321, Description = , PFAM = PF03107;PF03107)' T '35.1.26' 'not assigned.no ontology.DC1 domain containing protein' 'niben101scf00557_412240-415010' '(at2g44380 : 127.0) Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G43520.1); Has 1997 Blast hits to 742 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 1986; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative PGSC0003DMG400006321, Description = , PFAM = PF03107;PF03107;PF03107)' T '35.1.26' 'not assigned.no ontology.DC1 domain containing protein' 'niben101scf00586_216058-254471' '(at2g37820 : 155.0) Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G37800.1); Has 2103 Blast hits to 832 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 14; Plants - 1982; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative PGSC0003DMG401008889, Description = , PFAM = PF03107;PF03107)' T '35.1.26' 'not assigned.no ontology.DC1 domain containing protein' 'niben101scf01249_346862-349797' '(at2g27660 : 184.0) Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), Zinc finger, ZZ-type (InterPro:IPR000433), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G44400.1); Has 12415 Blast hits to 4315 proteins in 441 species: Archae - 16; Bacteria - 8002; Metazoa - 1069; Fungi - 491; Plants - 2227; Viruses - 23; Other Eukaryotes - 587 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative , Description = C1-like protein, PFAM = PF03107;PF03107;PF03107)' T '35.1.26' 'not assigned.no ontology.DC1 domain containing protein' 'niben101scf02164_247366-249762' '(at1g20990 : 210.0) Cysteine/Histidine-rich C1 domain family protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G16050.1); Has 1603 Blast hits to 716 proteins in 35 species: Archae - 0; Bacteria - 2; Metazoa - 20; Fungi - 0; Plants - 1573; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 420.0) & (original description: Putative BnaC05g16280D, Description = BnaC05g16280D protein, PFAM = PF03107;PF03107;PF03107)' T '35.1.26' 'not assigned.no ontology.DC1 domain containing protein' 'niben101scf02793_1592462-1596269' '(at2g27660 : 89.0) Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), Zinc finger, ZZ-type (InterPro:IPR000433), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G44400.1); Has 12415 Blast hits to 4315 proteins in 441 species: Archae - 16; Bacteria - 8002; Metazoa - 1069; Fungi - 491; Plants - 2227; Viruses - 23; Other Eukaryotes - 587 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative , Description = , PFAM = PF03107;PF03107)' T '35.1.26' 'not assigned.no ontology.DC1 domain containing protein' 'niben101scf05137_42253-47221' '(at2g37820 : 203.0) Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G37800.1); Has 2103 Blast hits to 832 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 14; Plants - 1982; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 406.0) & (original description: Putative BnaC03g72080D, Description = BnaC03g72080D protein, PFAM = PF03107;PF03107;PF03107)' T '35.1.26' 'not assigned.no ontology.DC1 domain containing protein' 'niben101scf05137_70680-74594' '(at2g37820 : 187.0) Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G37800.1); Has 2103 Blast hits to 832 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 14; Plants - 1982; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative PGSC0003DMG401008889, Description = Cysteine/Histidine-rich C1 domain family protein, putative, PFAM = PF03107;PF03107)' T '35.1.26' 'not assigned.no ontology.DC1 domain containing protein' 'niben101scf06538_237733-240407' '(at2g44380 : 162.0) Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G43520.1); Has 1997 Blast hits to 742 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 1986; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative At2g44370, Description = Cysteine/histidine-rich C1 domain-containing protein, PFAM = PF03107;PF03107)' T '35.1.26' 'not assigned.no ontology.DC1 domain containing protein' 'niben101scf07165_56728-59469' '(at2g27660 : 179.0) Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), Zinc finger, ZZ-type (InterPro:IPR000433), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G44400.1); Has 12415 Blast hits to 4315 proteins in 441 species: Archae - 16; Bacteria - 8002; Metazoa - 1069; Fungi - 491; Plants - 2227; Viruses - 23; Other Eukaryotes - 587 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative , Description = , PFAM = PF03107;PF03107;PF03107)' T '35.1.26' 'not assigned.no ontology.DC1 domain containing protein' 'niben101scf07709_131493-137115' '(at2g16050 : 352.0) Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT1G20990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 704.0) & (original description: Putative At2g16050, Description = Putative uncharacterized protein At2g16050, PFAM = PF03107;PF03107)' T '35.1.26' 'not assigned.no ontology.DC1 domain containing protein' 'niben101scf11307_17462-20391' '(at2g44370 : 108.0) Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G17740.1); Has 2013 Blast hits to 769 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 7; Plants - 1977; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative , Description = , PFAM = PF03107;PF03107)' T '35.1.26' 'not assigned.no ontology.DC1 domain containing protein' 'niben101scf11922_78812-81543' '(at2g28270 : 94.0) Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G44380.1); Has 1990 Blast hits to 716 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1986; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative PGSC0003DMG400006321, Description = , PFAM = PF03107;PF03107;PF03107)' T '35.1.26' 'not assigned.no ontology.DC1 domain containing protein' 'niben101scf11922_88584-191101' '(at2g44380 : 109.0) Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G43520.1); Has 1997 Blast hits to 742 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 1986; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative PGSC0003DMG400006321, Description = , PFAM = PF03107)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'nbv0.3scaffold461_37619-49286' '(at4g30480 : 247.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39435 : 196.0) no description available & (reliability: 494.0) & (original description: Putative 6A15, Description = Tetratricopeptide repeat protein 1, PFAM = PF13181)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'nbv0.3scaffold13703_14849-20476' '(at1g77230 : 144.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G08320.1); Has 1613 Blast hits to 1438 proteins in 361 species: Archae - 117; Bacteria - 321; Metazoa - 455; Fungi - 164; Plants - 198; Viruses - 0; Other Eukaryotes - 358 (source: NCBI BLink). & (gnl|cdd|35773 : 84.7) no description available & (reliability: 288.0) & (original description: Putative BnaC06g21110D, Description = BnaC06g21110D protein, PFAM = PF03170;PF13428)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'nbv0.3scaffold14865_3177-25303' '(at4g08320 : 341.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: protein phosphatase 5.2 (TAIR:AT2G42810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35773 : 159.0) no description available & (gnl|cdd|29151 : 87.1) no description available & (reliability: 682.0) & (original description: Putative sgta, Description = Small glutamine-rich tetratricopeptide repeat-containing protein alpha, PFAM = )' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'nbv0.3scaffold51013_2017-6425' '(at3g17670 : 200.0) tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: stress-inducible protein, putative (TAIR:AT1G62740.1). & (reliability: 400.0) & (original description: Putative)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'nbv0.5scaffold546_228575-233959' '(at3g16760 : 269.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: translocon at the outer membrane of chloroplasts 64-V (TAIR:AT5G09420.1); Has 16139 Blast hits to 8835 proteins in 857 species: Archae - 25; Bacteria - 5153; Metazoa - 3813; Fungi - 1812; Plants - 933; Viruses - 48; Other Eukaryotes - 4355 (source: NCBI BLink). & (reliability: 538.0) & (original description: Putative At3g16760, Description = At3g16760, PFAM = )' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'nbv0.5scaffold555_261914-281885' '(at4g08320 : 348.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: protein phosphatase 5.2 (TAIR:AT2G42810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35773 : 158.0) no description available & (gnl|cdd|29151 : 88.2) no description available & (reliability: 696.0) & (original description: Putative sgta, Description = Small glutamine-rich tetratricopeptide repeat-containing protein alpha, PFAM = PF16546)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'nbv0.5scaffold1787_322409-328315' '(at5g65160 : 503.0) tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G10090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35770 : 125.0) no description available & (reliability: 1006.0) & (original description: Putative TTL1, Description = TPR repeat-containing thioredoxin TTL1, PFAM = PF00515)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'nbv0.5scaffold3464_112007-117136' '(at1g76630 : 501.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04240.1). & (gnl|cdd|36342 : 253.0) no description available & (reliability: 1002.0) & (original description: Putative SKI3, Description = Tetratricopeptide repeat protein 37, PFAM = PF13181;PF13174)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'nbv0.5scaffold4876_96612-100423' '(at1g76630 : 356.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04240.1). & (gnl|cdd|36342 : 165.0) no description available & (reliability: 712.0) & (original description: Putative SKI3, Description = Tetratricopeptide repeat protein 37, PFAM = PF13174;PF13181)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben044scf00000341ctg000_19442-25345' '(at5g65160 : 513.0) tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G10090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35770 : 124.0) no description available & (reliability: 1026.0) & (original description: Putative TTL1, Description = TPR repeat-containing thioredoxin TTL1, PFAM = PF00515;PF13432)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben044scf00003779ctg025_68-5012' '(at5g17270 : 181.0) Protein prenylyltransferase superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Protein prenylyltransferase superfamily protein (TAIR:AT5G37130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative At5g37130, Description = BnaC03g08300D protein, PFAM = )' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben044scf00010174ctg000_1-12897' '(at1g04190 : 459.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: stress-inducible protein, putative (TAIR:AT1G62740.1); Has 20389 Blast hits to 12924 proteins in 1156 species: Archae - 970; Bacteria - 7001; Metazoa - 4309; Fungi - 1260; Plants - 1634; Viruses - 0; Other Eukaryotes - 5215 (source: NCBI BLink). & (gnl|cdd|37660 : 159.0) no description available & (q43468|stip_soybn : 84.0) Heat shock protein STI (Stress-inducible protein) (GmSTI) - Glycine max (Soybean) & (reliability: 918.0) & (original description: Putative TPR3, Description = Heat shock protein 70-interacting protein, PFAM = PF13414)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben044scf00013729ctg005_6459-10288' '(at1g11290 : 436.0) Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.; CHLORORESPIRATORY REDUCTION22 (CRR22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 48258 Blast hits to 14436 proteins in 289 species: Archae - 1; Bacteria - 2; Metazoa - 166; Fungi - 164; Plants - 47192; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (q76c99|rf1_orysa : 98.2) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 788.0) & (original description: Putative Sb05g006590, Description = Putative uncharacterized protein Sb05g006590, PFAM = PF13041;PF13041;PF01535;PF01535;PF13812)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben044scf00038399ctg007_1729-6134' '(at1g56090 : 239.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G30480.2); Has 5535 Blast hits to 5000 proteins in 436 species: Archae - 33; Bacteria - 410; Metazoa - 2580; Fungi - 616; Plants - 880; Viruses - 6; Other Eukaryotes - 1010 (source: NCBI BLink). & (reliability: 478.0) & (original description: Putative glysoja_011440, Description = Protein unc-45 like A, PFAM = )' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben044scf00039046ctg007_1-6751' '(at5g63200 : 237.0) tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1); Has 18351 Blast hits to 10064 proteins in 1197 species: Archae - 736; Bacteria - 8120; Metazoa - 2665; Fungi - 514; Plants - 588; Viruses - 0; Other Eukaryotes - 5728 (source: NCBI BLink). & (reliability: 474.0) & (original description: Putative , Description = O-linked N-acetylglucosamine transferase, PFAM = PF13181)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf00082_684125-700641' '(at2g39090 : 194.0) tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: anaphase-promoting complex subunit 8 (TAIR:AT3G48150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36389 : 97.8) no description available & (reliability: 388.0) & (original description: Putative APC7, Description = Cyclosome subunit 7, PFAM = PF13176;PF13181)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf00264_39541-95644' '(at1g76630 : 1143.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04240.1). & (gnl|cdd|36342 : 516.0) no description available & (reliability: 2286.0) & (original description: Putative SKI3, Description = Tetratricopeptide repeat protein SKI3, PFAM = PF13174;PF13181;PF13432)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf01221_1634231-1638123' '(at3g23330 : 358.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 22 (TAIR:AT3G12770.1); Has 38045 Blast hits to 13879 proteins in 261 species: Archae - 0; Bacteria - 10; Metazoa - 50; Fungi - 109; Plants - 37267; Viruses - 0; Other Eukaryotes - 609 (source: NCBI BLink). & (q76c99|rf1_orysa : 81.3) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 692.0) & (original description: Putative glysoja_000687, Description = Putative pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041;PF13041)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf01427_71738-76226' '(at4g32070 : 682.0) Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein (TAIR:AT2G25290.3); Has 6060 Blast hits to 4914 proteins in 361 species: Archae - 26; Bacteria - 288; Metazoa - 2537; Fungi - 747; Plants - 1305; Viruses - 3; Other Eukaryotes - 1154 (source: NCBI BLink). & (gnl|cdd|39354 : 444.0) no description available & (reliability: 1364.0) & (original description: Putative BnaA03g51910D, Description = BnaA03g51910D protein, PFAM = PF00564)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf01619_76333-81054' '(at4g32070 : 679.0) Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein (TAIR:AT2G25290.3); Has 6060 Blast hits to 4914 proteins in 361 species: Archae - 26; Bacteria - 288; Metazoa - 2537; Fungi - 747; Plants - 1305; Viruses - 3; Other Eukaryotes - 1154 (source: NCBI BLink). & (gnl|cdd|39354 : 444.0) no description available & (reliability: 1358.0) & (original description: Putative Phox2, Description = Heat shock protein 70 (HSP70)-interacting protein, putative, PFAM = PF00564)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf01819_206828-209853' '(at3g18420 : 207.0) Protein prenylyltransferase superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Bacterial transcriptional activator domain (InterPro:IPR005158), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G39470.1); Has 2891 Blast hits to 2326 proteins in 645 species: Archae - 346; Bacteria - 1680; Metazoa - 203; Fungi - 21; Plants - 126; Viruses - 0; Other Eukaryotes - 515 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative SG1, Description = BnaCnng25090D protein, PFAM = PF13432)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf02133_671054-674961' '(at5g66520 : 525.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G06540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 88.2) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 958.0) & (original description: Putative OTP81, Description = Pentatricopeptide repeat (PPR) superfamily protein, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041;PF12854;PF14432)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf02283_11242-27015' '(at1g01320 : 1807.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G28080.1). & (gnl|cdd|37050 : 357.0) no description available & (reliability: 3614.0) & (original description: Putative RCOM_0718430, Description = Eukaryotic translation initiation factor 3 subunit, putative, PFAM = PF12807;PF15044;PF13424;PF13424)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf02427_335529-340244' '(at5g43120 : 617.0) ARM-repeat/Tetratricopeptide repeat (TPR)-like protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM-repeat/Tetratricopeptide repeat (TPR)-like protein (TAIR:AT5G10200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39435 : 84.0) no description available & (reliability: 1234.0) & (original description: Putative Sb04g024620, Description = Putative uncharacterized protein Sb04g024620, PFAM = )' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf02608_304150-311424' '(at4g37210 : 312.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39763 : 103.0) no description available & (reliability: 624.0) & (original description: Putative At4g37210, Description = Putative uncharacterized protein At4g37210, PFAM = )' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf02751_670171-673912' '(at5g65160 : 322.0) tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G10090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35770 : 100.0) no description available & (gnl|cdd|29151 : 80.9) no description available & (reliability: 644.0) & (original description: Putative TTL1, Description = TPR repeat-containing thioredoxin TTL1, PFAM = PF13414;PF13431)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf03114_40067-44277' '(at3g49142 : 874.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G33990.1). & (q76c99|rf1_orysa : 105.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1748.0) & (original description: Putative PCMP-H77, Description = Putative pentatricopeptide repeat-containing protein At3g49142, PFAM = PF14432;PF13041;PF13041;PF13041;PF13041;PF01535)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf03161_43425-49739' '(at1g22700 : 298.0) Encodes a TPR protein with homology to Ycf37 from Synechocystis that is localized to the thylakoid membrane and is involved in photosystem I biogenesis.; Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: photosystem I assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1); Has 4968 Blast hits to 3486 proteins in 584 species: Archae - 119; Bacteria - 1806; Metazoa - 382; Fungi - 135; Plants - 249; Viruses - 0; Other Eukaryotes - 2277 (source: NCBI BLink). & (reliability: 596.0) & (original description: Putative CGL71, Description = Predicted protein, PFAM = PF00515)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf03326_554787-592966' '(at1g08070 : 361.0) Encodes a chloroplast RNA editing factor.; ORGANELLE TRANSCRIPT PROCESSING 82 (OTP82); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 45065 Blast hits to 15003 proteins in 296 species: Archae - 0; Bacteria - 12; Metazoa - 221; Fungi - 219; Plants - 43815; Viruses - 0; Other Eukaryotes - 798 (source: NCBI BLink). & (q76c99|rf1_orysa : 94.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 654.0) & (original description: Putative glysoja_021328, Description = Pentatricopeptide repeat-containing protein, PFAM = PF01535;PF01535;PF01535;PF13041;PF13041)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf03536_266795-281369' '(at4g37210 : 304.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39763 : 99.4) no description available & (reliability: 608.0) & (original description: Putative BnaC03g61730D, Description = BnaC03g61730D protein, PFAM = )' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf03804_325963-348335' '(at4g08320 : 347.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: protein phosphatase 5.2 (TAIR:AT2G42810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35773 : 158.0) no description available & (gnl|cdd|29151 : 88.6) no description available & (reliability: 694.0) & (original description: Putative sgta, Description = Small glutamine-rich tetratricopeptide repeat-containing protein alpha, PFAM = PF16546)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf03952_803063-819725' '(at1g01320 : 1833.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G28080.1). & (gnl|cdd|37050 : 360.0) no description available & (reliability: 3666.0) & (original description: Putative At1g01320, Description = Tetratricopeptide repeat-containing protein, PFAM = PF15044;PF13424;PF13424;PF12807)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf03964_498785-517195' '(at4g30480 : 240.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39435 : 201.0) no description available & (reliability: 480.0) & (original description: Putative int106, Description = Tetratricopeptide repeat protein, PFAM = PF07719)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf04331_359168-392306' '(at1g04190 : 457.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: stress-inducible protein, putative (TAIR:AT1G62740.1); Has 20389 Blast hits to 12924 proteins in 1156 species: Archae - 970; Bacteria - 7001; Metazoa - 4309; Fungi - 1260; Plants - 1634; Viruses - 0; Other Eukaryotes - 5215 (source: NCBI BLink). & (gnl|cdd|37660 : 158.0) no description available & (q43468|stip_soybn : 80.1) Heat shock protein STI (Stress-inducible protein) (GmSTI) - Glycine max (Soybean) & (reliability: 914.0) & (original description: Putative TPR3, Description = Heat shock protein 70-interacting protein, PFAM = PF13414)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf04926_619885-639479' '(at1g33400 : 665.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetratricopetide-repeat thioredoxin-like 4 (TAIR:AT3G58620.1); Has 7233 Blast hits to 6122 proteins in 455 species: Archae - 134; Bacteria - 1092; Metazoa - 2972; Fungi - 793; Plants - 1224; Viruses - 0; Other Eukaryotes - 1018 (source: NCBI BLink). & (gnl|cdd|35767 : 82.4) no description available & (reliability: 1330.0) & (original description: Putative MTR_3g093440, Description = Heat shock protein 70 (HSP70)-interacting protein, putative, PFAM = PF00856)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf05529_1-3248' '(at5g43120 : 221.0) ARM-repeat/Tetratricopeptide repeat (TPR)-like protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM-repeat/Tetratricopeptide repeat (TPR)-like protein (TAIR:AT5G10200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative At5g10200, Description = Heat shock protein 70 (HSP70)-interacting protein, putative, PFAM = )' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf05588_409630-419437' '(at5g21990 : 557.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-type peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT5G48570.1); Has 3652 Blast hits to 3437 proteins in 299 species: Archae - 17; Bacteria - 74; Metazoa - 1859; Fungi - 377; Plants - 620; Viruses - 0; Other Eukaryotes - 705 (source: NCBI BLink). & (gnl|cdd|35763 : 98.1) no description available & (reliability: 1114.0) & (original description: Putative OEP61, Description = Outer envelope protein 61, PFAM = PF00515)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf06080_433737-451131' '(at3g52140 : 1616.0) tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G28080.1). & (gnl|cdd|37050 : 576.0) no description available & (reliability: 3232.0) & (original description: Putative FMT, Description = Clustered mitochondria protein, PFAM = PF12807;PF13424;PF13236;PF15044)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf06176_249375-253666' '(at5g65160 : 380.0) tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G10090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35770 : 133.0) no description available & (reliability: 760.0) & (original description: Putative TTL4, Description = TPR repeat thioredoxin TTL1-like protein, PFAM = PF00515;PF00515;PF13174;PF13176)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf06684_288658-292676' '(at3g49142 : 875.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G33990.1). & (q76c99|rf1_orysa : 94.4) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1750.0) & (original description: Putative PCMP-H77, Description = Putative pentatricopeptide repeat-containing protein At3g49142, PFAM = PF01535;PF13041;PF13041;PF13041;PF13041;PF14432)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf06913_51692-57076' '(at3g16760 : 262.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: translocon at the outer membrane of chloroplasts 64-V (TAIR:AT5G09420.1); Has 16139 Blast hits to 8835 proteins in 857 species: Archae - 25; Bacteria - 5153; Metazoa - 3813; Fungi - 1812; Plants - 933; Viruses - 48; Other Eukaryotes - 4355 (source: NCBI BLink). & (reliability: 524.0) & (original description: Putative At3g16760, Description = At3g16760, PFAM = )' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf07035_680609-693498' '(at5g21990 : 542.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-type peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT5G48570.1); Has 3652 Blast hits to 3437 proteins in 299 species: Archae - 17; Bacteria - 74; Metazoa - 1859; Fungi - 377; Plants - 620; Viruses - 0; Other Eukaryotes - 705 (source: NCBI BLink). & (gnl|cdd|35763 : 93.9) no description available & (reliability: 1084.0) & (original description: Putative BnaC09g36600D, Description = BnaC09g36600D protein, PFAM = PF00515)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf07105_195469-206472' '(at2g31240 : 693.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G10840.1); Has 9091 Blast hits to 4783 proteins in 709 species: Archae - 186; Bacteria - 3199; Metazoa - 3809; Fungi - 509; Plants - 353; Viruses - 6; Other Eukaryotes - 1029 (source: NCBI BLink). & (gnl|cdd|37051 : 253.0) no description available & (reliability: 1386.0) & (original description: Putative BnaA04g18090D, Description = BnaA04g18090D protein, PFAM = PF13181;PF13181)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf08137_72267-77863' '(at3g17670 : 186.0) tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: stress-inducible protein, putative (TAIR:AT1G62740.1). & (reliability: 372.0) & (original description: Putative , Description = , PFAM = PF14559)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf08445_292444-295640' '(at3g18420 : 296.0) Protein prenylyltransferase superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Bacterial transcriptional activator domain (InterPro:IPR005158), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G39470.1); Has 2891 Blast hits to 2326 proteins in 645 species: Archae - 346; Bacteria - 1680; Metazoa - 203; Fungi - 21; Plants - 126; Viruses - 0; Other Eukaryotes - 515 (source: NCBI BLink). & (reliability: 592.0) & (original description: Putative SG1, Description = protein SLOW GREEN 1, chloroplastic, PFAM = PF13174)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf08544_157847-169939' '(at5g63200 : 662.0) tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1); Has 18351 Blast hits to 10064 proteins in 1197 species: Archae - 736; Bacteria - 8120; Metazoa - 2665; Fungi - 514; Plants - 588; Viruses - 0; Other Eukaryotes - 5728 (source: NCBI BLink). & (gnl|cdd|39826 : 95.9) no description available & (reliability: 1324.0) & (original description: Putative , Description = Putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY-like, PFAM = PF14559;PF13424;PF13181;PF13181)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf08564_92897-97118' '(at1g56090 : 235.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G30480.2); Has 5535 Blast hits to 5000 proteins in 436 species: Archae - 33; Bacteria - 410; Metazoa - 2580; Fungi - 616; Plants - 880; Viruses - 6; Other Eukaryotes - 1010 (source: NCBI BLink). & (reliability: 470.0) & (original description: Putative glysoja_011440, Description = Protein unc-45 like A, PFAM = )' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf09467_25535-31147' '(at1g77230 : 160.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G08320.1); Has 1613 Blast hits to 1438 proteins in 361 species: Archae - 117; Bacteria - 321; Metazoa - 455; Fungi - 164; Plants - 198; Viruses - 0; Other Eukaryotes - 358 (source: NCBI BLink). & (gnl|cdd|35773 : 99.7) no description available & (reliability: 320.0) & (original description: Putative BnaC06g21110D, Description = BnaC06g21110D protein, PFAM = PF13428)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf10579_98375-102063' '(at2g29760 : 355.0) Encodes a chloroplast RNA editing factor.; ORGANELLE TRANSCRIPT PROCESSING 81 (OTP81); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G08070.1); Has 39055 Blast hits to 14294 proteins in 286 species: Archae - 1; Bacteria - 14; Metazoa - 160; Fungi - 158; Plants - 37962; Viruses - 2; Other Eukaryotes - 758 (source: NCBI BLink). & (q76c99|rf1_orysa : 82.8) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 642.0) & (original description: Putative ZOSMA_76G00260, Description = Pentatricopeptide repeat-containing protein, PFAM = PF13041;PF01535;PF01535;PF01535;PF01535;PF01535;PF01535)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf16768_120075-123661' '(at3g49142 : 332.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G33990.1). & (q76c99|rf1_orysa : 128.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 664.0) & (original description: Putative glysoja_000391, Description = Pentatricopeptide repeat-containing protein, mitochondrial, PFAM = PF17177;PF13041;PF13041;PF01535;PF01535;PF01535)' T '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'niben101scf32880_13034-17156' '(at1g76630 : 254.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04240.1). & (reliability: 508.0) & (original description: Putative SKI3, Description = AtSKI3, PFAM = PF13181)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'nbv0.3scaffold1599_69930-74959' '(at5g28640 : 128.0) Encodes a protein with similarity to mammalian transcriptional coactivator that is involved in cell proliferation during leaf and flower development. Loss of function mutations have narrow, pointed leaves and narrow floral organs. AN3 interacts with members of the growth regulating factor (GRF) family of transcription factors.; ANGUSTIFOLIA 3 (AN3); CONTAINS InterPro DOMAIN/s: SSXT (InterPro:IPR007726); BEST Arabidopsis thaliana protein match is: GRF1-interacting factor 3 (TAIR:AT4G00850.1); Has 1752 Blast hits to 1579 proteins in 197 species: Archae - 0; Bacteria - 58; Metazoa - 1009; Fungi - 145; Plants - 200; Viruses - 1; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative GIF1, Description = GRF1-interacting factor 1, PFAM = PF05030)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'nbv0.3scaffold4895_44369-48463' '(at3g06130 : 134.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G19090.3). & (gnl|cdd|36816 : 91.2) no description available & (reliability: 244.0) & (original description: Putative umc1319, Description = Chloroplast-targeted copper chaperone, putative, PFAM = PF00403)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'nbv0.3scaffold15471_16331-28743' '(at5g28640 : 117.0) Encodes a protein with similarity to mammalian transcriptional coactivator that is involved in cell proliferation during leaf and flower development. Loss of function mutations have narrow, pointed leaves and narrow floral organs. AN3 interacts with members of the growth regulating factor (GRF) family of transcription factors.; ANGUSTIFOLIA 3 (AN3); CONTAINS InterPro DOMAIN/s: SSXT (InterPro:IPR007726); BEST Arabidopsis thaliana protein match is: GRF1-interacting factor 3 (TAIR:AT4G00850.1); Has 1752 Blast hits to 1579 proteins in 197 species: Archae - 0; Bacteria - 58; Metazoa - 1009; Fungi - 145; Plants - 200; Viruses - 1; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative AN3, Description = AtGIF1, PFAM = PF05030)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'nbv0.3scaffold17822_17355-34372' '(at5g11700 : 1389.0) BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G32920.3); Has 8203 Blast hits to 3102 proteins in 389 species: Archae - 3; Bacteria - 5624; Metazoa - 852; Fungi - 139; Plants - 704; Viruses - 77; Other Eukaryotes - 804 (source: NCBI BLink). & (reliability: 2778.0) & (original description: Putative Os01g0187400, Description = Os01g0187400 protein, PFAM = )' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'nbv0.3scaffold36224_13686-20166' '(at1g27090 : 272.0) glycine-rich protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24690.1); Has 13206 Blast hits to 7104 proteins in 677 species: Archae - 0; Bacteria - 2039; Metazoa - 5686; Fungi - 1146; Plants - 2571; Viruses - 80; Other Eukaryotes - 1684 (source: NCBI BLink). & (reliability: 544.0) & (original description: Putative At1g27090, Description = Putative uncharacterized protein At1g27090, PFAM = )' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'nbv0.3scaffold51206_1-5077' '(at5g28640 : 110.0) Encodes a protein with similarity to mammalian transcriptional coactivator that is involved in cell proliferation during leaf and flower development. Loss of function mutations have narrow, pointed leaves and narrow floral organs. AN3 interacts with members of the growth regulating factor (GRF) family of transcription factors.; ANGUSTIFOLIA 3 (AN3); CONTAINS InterPro DOMAIN/s: SSXT (InterPro:IPR007726); BEST Arabidopsis thaliana protein match is: GRF1-interacting factor 3 (TAIR:AT4G00850.1); Has 1752 Blast hits to 1579 proteins in 197 species: Archae - 0; Bacteria - 58; Metazoa - 1009; Fungi - 145; Plants - 200; Viruses - 1; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative AN3, Description = AtGIF1, PFAM = PF05030)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'nbv0.3scaffold51288_6274-9372' '(at5g49350 : 135.0) Glycine-rich protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56320.1). & (reliability: 270.0) & (original description: Putative PGSC0003DMG403007553, Description = Glycine-rich protein, PFAM = )' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'nbv0.3scaffold102673_699-3434' '(at2g15780 : 154.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G15770.1); Has 41667 Blast hits to 12483 proteins in 1023 species: Archae - 27; Bacteria - 14795; Metazoa - 14119; Fungi - 2165; Plants - 4190; Viruses - 397; Other Eukaryotes - 5974 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative arf30, Description = Cupredoxin, PFAM = )' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'nbv0.5scaffold380_683612-691443' '(at1g27090 : 251.0) glycine-rich protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24690.1); Has 13206 Blast hits to 7104 proteins in 677 species: Archae - 0; Bacteria - 2039; Metazoa - 5686; Fungi - 1146; Plants - 2571; Viruses - 80; Other Eukaryotes - 1684 (source: NCBI BLink). & (reliability: 502.0) & (original description: Putative At1g27090, Description = Putative uncharacterized protein At1g27090, PFAM = )' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'nbv0.5scaffold773_284690-306864' '(at5g11700 : 1602.0) BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G32920.3); Has 8203 Blast hits to 3102 proteins in 389 species: Archae - 3; Bacteria - 5624; Metazoa - 852; Fungi - 139; Plants - 704; Viruses - 77; Other Eukaryotes - 804 (source: NCBI BLink). & (reliability: 3204.0) & (original description: Putative Os04g0182600, Description = Os04g0182600 protein, PFAM = )' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'nbv0.5scaffold773_292704-544273' '(at5g11700 : 167.0) BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G32920.3); Has 8203 Blast hits to 3102 proteins in 389 species: Archae - 3; Bacteria - 5624; Metazoa - 852; Fungi - 139; Plants - 704; Viruses - 77; Other Eukaryotes - 804 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative At4g32920, Description = Glycine-rich protein, PFAM = )' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'nbv0.5scaffold3708_222457-234845' '(at5g47020 : 711.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11700.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1422.0) & (original description: Putative Os04g0182650, Description = Os04g0182650 protein, PFAM = )' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben044scf00002010ctg004_46653-50551' '(gnl|cdd|68893 : 315.0) no description available & (at2g38070 : 291.0) Protein of unknown function (DUF740); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF740) (TAIR:AT3G09070.1); Has 108 Blast hits to 106 proteins in 27 species: Archae - 0; Bacteria - 3; Metazoa - 6; Fungi - 2; Plants - 76; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (reliability: 548.0) & (original description: Putative At3g09070, Description = UPF0503 protein At3g09070, chloroplastic, PFAM = PF05340)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben044scf00002801ctg008_694-5457' '(gnl|cdd|38368 : 127.0) no description available & (at4g02450 : 117.0) HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT3G03773.1); Has 981 Blast hits to 954 proteins in 256 species: Archae - 7; Bacteria - 144; Metazoa - 401; Fungi - 86; Plants - 167; Viruses - 20; Other Eukaryotes - 156 (source: NCBI BLink). & (gnl|cdd|29314 : 88.5) no description available & (reliability: 234.0) & (original description: Putative PMS1, Description = AT4g02450/T14P8_5, PFAM = PF04969)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben044scf00003515ctg000_1-12500' '(at5g47020 : 1266.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11700.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 2532.0) & (original description: Putative Os04g0182650, Description = Os04g0182650 protein, PFAM = )' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben044scf00017636ctg001_1-2321' '(at5g11700 : 249.0) BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G32920.3); Has 8203 Blast hits to 3102 proteins in 389 species: Archae - 3; Bacteria - 5624; Metazoa - 852; Fungi - 139; Plants - 704; Viruses - 77; Other Eukaryotes - 804 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative At4g32920, Description = Glycine-rich protein, PFAM = )' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben044scf00017636ctg002_359-12196' '(at5g11700 : 805.0) BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G32920.3); Has 8203 Blast hits to 3102 proteins in 389 species: Archae - 3; Bacteria - 5624; Metazoa - 852; Fungi - 139; Plants - 704; Viruses - 77; Other Eukaryotes - 804 (source: NCBI BLink). & (reliability: 1610.0) & (original description: Putative At4g32920, Description = Putative NOS, PFAM = )' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben044scf00017636ctg002_1886-6052' '(at5g11700 : 166.0) BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G32920.3); Has 8203 Blast hits to 3102 proteins in 389 species: Archae - 3; Bacteria - 5624; Metazoa - 852; Fungi - 139; Plants - 704; Viruses - 77; Other Eukaryotes - 804 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative At4g32920, Description = Glycine-rich protein, PFAM = )' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben044scf00017636ctg003_1-4992' '(at4g32920 : 598.0) glycine-rich protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11700.1). & (reliability: 1196.0) & (original description: Putative BnaC09g44900D, Description = BnaC09g44900D protein, PFAM = )' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben044scf00020059ctg007_7313-15098' '(at4g37900 : 692.0) Protein of unknown function (duplicated DUF1399); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1399 (InterPro:IPR009836); BEST Arabidopsis thaliana protein match is: Protein of unknown function (duplicated DUF1399) (TAIR:AT2G22660.2); Has 24258 Blast hits to 6156 proteins in 640 species: Archae - 4; Bacteria - 13513; Metazoa - 5207; Fungi - 694; Plants - 2964; Viruses - 274; Other Eukaryotes - 1602 (source: NCBI BLink). & (gnl|cdd|70629 : 164.0) no description available & (reliability: 1384.0) & (original description: Putative GRDP1, Description = Glycine-rich domain-containing protein 1, PFAM = PF07173;PF07173;PF07173)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben044scf00020760ctg002_1141-4397' '(at1g27090 : 266.0) glycine-rich protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24690.1); Has 13206 Blast hits to 7104 proteins in 677 species: Archae - 0; Bacteria - 2039; Metazoa - 5686; Fungi - 1146; Plants - 2571; Viruses - 80; Other Eukaryotes - 1684 (source: NCBI BLink). & (reliability: 532.0) & (original description: Putative At1g27090, Description = Putative uncharacterized protein At1g27090, PFAM = )' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben044scf00024676ctg011_1-7512' '(at4g17620 : 527.0) glycine-rich protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RAI1 like (InterPro:IPR013961). & (gnl|cdd|37193 : 243.0) no description available & (reliability: 1054.0) & (original description: Putative dl4845w, Description = Decapping nuclease DXO homolog, chloroplastic, PFAM = PF08652)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf00069_234676-245604' '(gnl|cdd|38368 : 125.0) no description available & (at4g02450 : 107.0) HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT3G03773.1); Has 981 Blast hits to 954 proteins in 256 species: Archae - 7; Bacteria - 144; Metazoa - 401; Fungi - 86; Plants - 167; Viruses - 20; Other Eukaryotes - 156 (source: NCBI BLink). & (gnl|cdd|29314 : 81.2) no description available & (reliability: 214.0) & (original description: Putative PMS1, Description = AT4g02450/T14P8_5, PFAM = PF04969)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf00069_1102714-1110002' '(at4g37900 : 749.0) Protein of unknown function (duplicated DUF1399); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1399 (InterPro:IPR009836); BEST Arabidopsis thaliana protein match is: Protein of unknown function (duplicated DUF1399) (TAIR:AT2G22660.2); Has 24258 Blast hits to 6156 proteins in 640 species: Archae - 4; Bacteria - 13513; Metazoa - 5207; Fungi - 694; Plants - 2964; Viruses - 274; Other Eukaryotes - 1602 (source: NCBI BLink). & (gnl|cdd|70629 : 199.0) no description available & (reliability: 1498.0) & (original description: Putative GRDP1, Description = AtGRDP1, PFAM = PF07173;PF07173)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf00211_97443-101966' '(gnl|cdd|69777 : 123.0) no description available & (at4g38710 : 113.0) glycine-rich protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Plant specific eukaryotic initiation factor 4B (InterPro:IPR010433); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4B1 (TAIR:AT3G26400.1). & (reliability: 226.0) & (original description: Putative EIF4B3, Description = Eukaryotic translation initiation factor 4B3, PFAM = PF06273;PF06273)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf00351_591843-600263' '(at4g37900 : 776.0) Protein of unknown function (duplicated DUF1399); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1399 (InterPro:IPR009836); BEST Arabidopsis thaliana protein match is: Protein of unknown function (duplicated DUF1399) (TAIR:AT2G22660.2); Has 24258 Blast hits to 6156 proteins in 640 species: Archae - 4; Bacteria - 13513; Metazoa - 5207; Fungi - 694; Plants - 2964; Viruses - 274; Other Eukaryotes - 1602 (source: NCBI BLink). & (gnl|cdd|70629 : 207.0) no description available & (reliability: 1552.0) & (original description: Putative GRDP2, Description = Glycine-rich domain-containing protein 2, PFAM = PF07173;PF07173)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf00439_1070720-1075984' '(at4g22740 : 153.0) glycine-rich protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Myelodysplasia-myeloid leukemia factor 1-interacting protein (InterPro:IPR019376); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G45380.1); Has 6293 Blast hits to 3395 proteins in 481 species: Archae - 2; Bacteria - 946; Metazoa - 3214; Fungi - 422; Plants - 978; Viruses - 19; Other Eukaryotes - 712 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative PGSC0003DMG400003933, Description = AT4g22740/T12H17_130, PFAM = PF10248)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf01047_183801-212407' '(at5g47020 : 1637.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11700.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 3274.0) & (original description: Putative BnaA06g35660D, Description = BnaA06g35660D protein, PFAM = )' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf01048_60669-68371' '(at4g37900 : 739.0) Protein of unknown function (duplicated DUF1399); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1399 (InterPro:IPR009836); BEST Arabidopsis thaliana protein match is: Protein of unknown function (duplicated DUF1399) (TAIR:AT2G22660.2); Has 24258 Blast hits to 6156 proteins in 640 species: Archae - 4; Bacteria - 13513; Metazoa - 5207; Fungi - 694; Plants - 2964; Viruses - 274; Other Eukaryotes - 1602 (source: NCBI BLink). & (gnl|cdd|70629 : 216.0) no description available & (reliability: 1478.0) & (original description: Putative GRDP1, Description = Glycine-rich domain-containing protein 1, PFAM = PF07173;PF07173)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf01521_798236-804926' '(at1g27090 : 273.0) glycine-rich protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24690.1); Has 13206 Blast hits to 7104 proteins in 677 species: Archae - 0; Bacteria - 2039; Metazoa - 5686; Fungi - 1146; Plants - 2571; Viruses - 80; Other Eukaryotes - 1684 (source: NCBI BLink). & (reliability: 546.0) & (original description: Putative At1g27090, Description = Putative uncharacterized protein At1g27090, PFAM = )' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf01745_775810-784576' '(at4g17620 : 640.0) glycine-rich protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RAI1 like (InterPro:IPR013961). & (gnl|cdd|37193 : 286.0) no description available & (reliability: 1280.0) & (original description: Putative At4g17620, Description = Decapping nuclease DXO homolog, chloroplastic, PFAM = PF08652)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf01847_492153-496531' '(gnl|cdd|69777 : 123.0) no description available & (at4g38710 : 122.0) glycine-rich protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Plant specific eukaryotic initiation factor 4B (InterPro:IPR010433); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4B1 (TAIR:AT3G26400.1). & (reliability: 244.0) & (original description: Putative EIF4B3, Description = Eukaryotic translation initiation factor 4B3, PFAM = PF06273;PF06273)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf01942_176479-181071' '(gnl|cdd|38368 : 114.0) no description available & (at4g02450 : 89.0) HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT3G03773.1); Has 981 Blast hits to 954 proteins in 256 species: Archae - 7; Bacteria - 144; Metazoa - 401; Fungi - 86; Plants - 167; Viruses - 20; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative PMS1, Description = AT4g02450/T14P8_5, PFAM = PF04969)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf02217_139770-162289' '(at5g11700 : 1649.0) BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G32920.3); Has 8203 Blast hits to 3102 proteins in 389 species: Archae - 3; Bacteria - 5624; Metazoa - 852; Fungi - 139; Plants - 704; Viruses - 77; Other Eukaryotes - 804 (source: NCBI BLink). & (reliability: 3298.0) & (original description: Putative BnaC09g44880D, Description = BnaC09g44880D protein, PFAM = )' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf02393_254221-257930' '(at2g15780 : 155.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G15770.1); Has 41667 Blast hits to 12483 proteins in 1023 species: Archae - 27; Bacteria - 14795; Metazoa - 14119; Fungi - 2165; Plants - 4190; Viruses - 397; Other Eukaryotes - 5974 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative PGSC0003DMG400008255, Description = Cupredoxin, PFAM = PF02298)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf02569_216731-220874' '(at4g22740 : 157.0) glycine-rich protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Myelodysplasia-myeloid leukemia factor 1-interacting protein (InterPro:IPR019376); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G45380.1); Has 6293 Blast hits to 3395 proteins in 481 species: Archae - 2; Bacteria - 946; Metazoa - 3214; Fungi - 422; Plants - 978; Viruses - 19; Other Eukaryotes - 712 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative Sb07g001710, Description = Putative uncharacterized protein Sb07g001710, PFAM = PF10248)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf03220_76988-83267' '(at1g27090 : 255.0) glycine-rich protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24690.1); Has 13206 Blast hits to 7104 proteins in 677 species: Archae - 0; Bacteria - 2039; Metazoa - 5686; Fungi - 1146; Plants - 2571; Viruses - 80; Other Eukaryotes - 1684 (source: NCBI BLink). & (reliability: 510.0) & (original description: Putative At1g27090, Description = Putative uncharacterized protein At1g27090, PFAM = )' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf03300_5010-7831' '(at2g15780 : 151.0) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G15770.1); Has 41667 Blast hits to 12483 proteins in 1023 species: Archae - 27; Bacteria - 14795; Metazoa - 14119; Fungi - 2165; Plants - 4190; Viruses - 397; Other Eukaryotes - 5974 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative arf30, Description = Cupredoxin, PFAM = )' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf03325_188750-192648' '(gnl|cdd|68893 : 279.0) no description available & (at2g38070 : 259.0) Protein of unknown function (DUF740); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF740) (TAIR:AT3G09070.1); Has 108 Blast hits to 106 proteins in 27 species: Archae - 0; Bacteria - 3; Metazoa - 6; Fungi - 2; Plants - 76; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (reliability: 474.0) & (original description: Putative At2g38070, Description = UPF0503 protein At3g09070, chloroplastic, PFAM = PF05340)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf03486_136061-141160' '(at2g45380 : 129.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G22740.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative , Description = Glycine-rich protein, putative isoform 1, PFAM = PF10248)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf03648_419956-425453' '(gnl|cdd|38368 : 127.0) no description available & (at4g02450 : 116.0) HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT3G03773.1); Has 981 Blast hits to 954 proteins in 256 species: Archae - 7; Bacteria - 144; Metazoa - 401; Fungi - 86; Plants - 167; Viruses - 20; Other Eukaryotes - 156 (source: NCBI BLink). & (gnl|cdd|29314 : 91.6) no description available & (reliability: 232.0) & (original description: Putative PMS1, Description = AT4g02450/T14P8_5, PFAM = PF04969)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf03885_347993-367817' '(at5g11700 : 1272.0) BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G32920.3); Has 8203 Blast hits to 3102 proteins in 389 species: Archae - 3; Bacteria - 5624; Metazoa - 852; Fungi - 139; Plants - 704; Viruses - 77; Other Eukaryotes - 804 (source: NCBI BLink). & (reliability: 2544.0) & (original description: Putative Os01g0187400, Description = Os01g0187400 protein, PFAM = )' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf04623_119154-123917' '(gnl|cdd|38368 : 128.0) no description available & (at4g02450 : 117.0) HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT3G03773.1); Has 981 Blast hits to 954 proteins in 256 species: Archae - 7; Bacteria - 144; Metazoa - 401; Fungi - 86; Plants - 167; Viruses - 20; Other Eukaryotes - 156 (source: NCBI BLink). & (gnl|cdd|29314 : 93.5) no description available & (reliability: 234.0) & (original description: Putative PMS1, Description = AT4g02450/T14P8_5, PFAM = PF04969)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf05319_582205-586524' '(at3g06130 : 133.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G19090.3). & (gnl|cdd|36816 : 91.6) no description available & (reliability: 242.0) & (original description: Putative At1g23000, Description = Chloroplast-targeted copper chaperone, putative, PFAM = PF00403)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf05982_27850-40456' '(at4g22740 : 111.0) glycine-rich protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Myelodysplasia-myeloid leukemia factor 1-interacting protein (InterPro:IPR019376); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G45380.1); Has 6293 Blast hits to 3395 proteins in 481 species: Archae - 2; Bacteria - 946; Metazoa - 3214; Fungi - 422; Plants - 978; Viruses - 19; Other Eukaryotes - 712 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative At4g22740, Description = AT4g22740/T12H17_130, PFAM = PF10248)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf05982_84802-89733' '(at2g45380 : 127.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G22740.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative , Description = Myelodysplasia-myeloid leukemia factor 1-interacting protein, PFAM = PF10248)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf06291_333428-339224' '(at5g28640 : 116.0) Encodes a protein with similarity to mammalian transcriptional coactivator that is involved in cell proliferation during leaf and flower development. Loss of function mutations have narrow, pointed leaves and narrow floral organs. AN3 interacts with members of the growth regulating factor (GRF) family of transcription factors.; ANGUSTIFOLIA 3 (AN3); CONTAINS InterPro DOMAIN/s: SSXT (InterPro:IPR007726); BEST Arabidopsis thaliana protein match is: GRF1-interacting factor 3 (TAIR:AT4G00850.1); Has 1752 Blast hits to 1579 proteins in 197 species: Archae - 0; Bacteria - 58; Metazoa - 1009; Fungi - 145; Plants - 200; Viruses - 1; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative AN3, Description = AtGIF1, PFAM = PF05030)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf07463_57245-62465' '(at5g28640 : 112.0) Encodes a protein with similarity to mammalian transcriptional coactivator that is involved in cell proliferation during leaf and flower development. Loss of function mutations have narrow, pointed leaves and narrow floral organs. AN3 interacts with members of the growth regulating factor (GRF) family of transcription factors.; ANGUSTIFOLIA 3 (AN3); CONTAINS InterPro DOMAIN/s: SSXT (InterPro:IPR007726); BEST Arabidopsis thaliana protein match is: GRF1-interacting factor 3 (TAIR:AT4G00850.1); Has 1752 Blast hits to 1579 proteins in 197 species: Archae - 0; Bacteria - 58; Metazoa - 1009; Fungi - 145; Plants - 200; Viruses - 1; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative AN3, Description = AtGIF1, PFAM = PF05030)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf11037_23984-29883' '(gnl|cdd|38368 : 126.0) no description available & (at4g02450 : 123.0) HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT3G03773.1); Has 981 Blast hits to 954 proteins in 256 species: Archae - 7; Bacteria - 144; Metazoa - 401; Fungi - 86; Plants - 167; Viruses - 20; Other Eukaryotes - 156 (source: NCBI BLink). & (gnl|cdd|29314 : 82.4) no description available & (reliability: 246.0) & (original description: Putative PMS1, Description = AT4g02450/T14P8_5, PFAM = PF04969)' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf13164_241446-244694' '(at5g49350 : 130.0) Glycine-rich protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56320.1). & (reliability: 260.0) & (original description: Putative PGSC0003DMG403007553, Description = Glycine-rich protein, PFAM = )' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf14136_130095-138083' '(at1g27090 : 251.0) glycine-rich protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24690.1); Has 13206 Blast hits to 7104 proteins in 677 species: Archae - 0; Bacteria - 2039; Metazoa - 5686; Fungi - 1146; Plants - 2571; Viruses - 80; Other Eukaryotes - 1684 (source: NCBI BLink). & (reliability: 502.0) & (original description: Putative POPTR_0008s19880g, Description = Glycine-rich family protein, PFAM = )' T '35.1.40' 'not assigned.no ontology.glycine rich proteins' 'niben101scf16773_269898-283616' '(at5g28640 : 117.0) Encodes a protein with similarity to mammalian transcriptional coactivator that is involved in cell proliferation during leaf and flower development. Loss of function mutations have narrow, pointed leaves and narrow floral organs. AN3 interacts with members of the growth regulating factor (GRF) family of transcription factors.; ANGUSTIFOLIA 3 (AN3); CONTAINS InterPro DOMAIN/s: SSXT (InterPro:IPR007726); BEST Arabidopsis thaliana protein match is: GRF1-interacting factor 3 (TAIR:AT4G00850.1); Has 1752 Blast hits to 1579 proteins in 197 species: Archae - 0; Bacteria - 58; Metazoa - 1009; Fungi - 145; Plants - 200; Viruses - 1; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative GIF1, Description = GRF1-interacting factor 1, PFAM = PF05030)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'nbv0.3scaffold6856_13986-16735' '(at1g49330 : 164.0) hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G16190.1); Has 882 Blast hits to 731 proteins in 140 species: Archae - 0; Bacteria - 49; Metazoa - 218; Fungi - 71; Plants - 381; Viruses - 66; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'nbv0.3scaffold10117_6434-11507' '(at1g63830 : 286.0) PLAC8 family protein; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT5G41390.1). & (reliability: 552.0) & (original description: Putative F16G20.170, Description = Putative uncharacterized protein AT4g23470, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'nbv0.3scaffold13652_11255-18283' '(at4g26750 : 301.0) hydroxyproline-rich glycoprotein family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: glucan synthase-like 11 (TAIR:AT3G59100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36135 : 212.0) no description available & (gnl|cdd|86706 : 209.0) no description available & (reliability: 602.0) & (original description: Putative LIP5, Description = Protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5, PFAM = PF04652)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'nbv0.3scaffold14533_9420-16052' '(at3g25690 : 600.0) actin binding protein required for normal chloroplast positioning; CHLOROPLAST UNUSUAL POSITIONING 1 (CHUP1); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G18570.1). & (reliability: 1200.0) & (original description: Putative BnaA06g33450D, Description = BnaA06g33450D protein, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'nbv0.3scaffold18258_562-6911' '(at3g25690 : 305.0) actin binding protein required for normal chloroplast positioning; CHLOROPLAST UNUSUAL POSITIONING 1 (CHUP1); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G18570.1). & (reliability: 610.0) & (original description: Putative Sb07g002450, Description = Putative uncharacterized protein Sb07g002450, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'nbv0.3scaffold23878_13096-16704' '(at5g41390 : 151.0) PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT1G63830.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative At1g63830, Description = PLAC8 family protein, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'nbv0.3scaffold35175_806-12726' '(at1g21580 : 452.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 6412 Blast hits to 4180 proteins in 441 species: Archae - 2; Bacteria - 615; Metazoa - 1993; Fungi - 936; Plants - 1540; Viruses - 149; Other Eukaryotes - 1177 (source: NCBI BLink). & (gnl|cdd|36705 : 103.0) no description available & (reliability: 904.0) & (original description: Putative zc3h3, Description = Zinc finger CCCH domain-containing protein 3, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'nbv0.3scaffold36934_8114-10923' '(at1g49330 : 195.0) hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G16190.1); Has 882 Blast hits to 731 proteins in 140 species: Archae - 0; Bacteria - 49; Metazoa - 218; Fungi - 71; Plants - 381; Viruses - 66; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'nbv0.3scaffold49022_167-13436' '(at1g15130 : 1003.0) Endosomal targeting BRO1-like domain-containing protein; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); Has 26948 Blast hits to 15985 proteins in 1003 species: Archae - 32; Bacteria - 2662; Metazoa - 9770; Fungi - 4642; Plants - 6039; Viruses - 612; Other Eukaryotes - 3191 (source: NCBI BLink). & (gnl|cdd|37431 : 504.0) no description available & (gnl|cdd|86235 : 381.0) no description available & (reliability: 2006.0) & (original description: Putative HMA9, Description = ALG2-interacting protein X, PFAM = PF03097;PF13949)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'nbv0.3scaffold51234_3893-11021' '(at3g56590 : 284.0) hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G10810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 568.0) & (original description: Putative BnaC08g27490D, Description = BnaC08g27490D protein, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'nbv0.3scaffold53137_727-7981' '(at5g52430 : 317.0) hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT4G25620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 634.0) & (original description: Putative At1g76660, Description = Uncharacterized protein At1g76660, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'nbv0.3scaffold69192_1777-8880' '(at3g29390 : 323.0) Nuclear localized K-homology containing protein that interacts with AS1.; RS2-interacting KH protein (RIK); FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; Has 9708 Blast hits to 6008 proteins in 528 species: Archae - 14; Bacteria - 833; Metazoa - 2799; Fungi - 1318; Plants - 2564; Viruses - 582; Other Eukaryotes - 1598 (source: NCBI BLink). & (reliability: 646.0) & (original description: Putative RIK, Description = Protein RIK, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'nbv0.3scaffold69644_1-5591' '(at1g53645 : 253.0) hydroxyproline-rich glycoprotein family protein; Has 15375 Blast hits to 12179 proteins in 920 species: Archae - 8; Bacteria - 1425; Metazoa - 5915; Fungi - 2848; Plants - 1527; Viruses - 230; Other Eukaryotes - 3422 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative At1g53645, Description = BnaC06g06470D protein, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'nbv0.3scaffold81773_3484-6815' '(at5g57070 : 102.0) hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G72790.1); Has 43553 Blast hits to 23221 proteins in 1113 species: Archae - 87; Bacteria - 4345; Metazoa - 18926; Fungi - 6211; Plants - 7264; Viruses - 1427; Other Eukaryotes - 5293 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative PGSC0003DMG400016079, Description = Hydroxyproline-rich glycoprotein, PFAM = PF05553)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'nbv0.5scaffold336_766913-782144' '(at4g04980 : 320.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11070.1); Has 23100 Blast hits to 15699 proteins in 1063 species: Archae - 116; Bacteria - 2262; Metazoa - 8308; Fungi - 3268; Plants - 3181; Viruses - 958; Other Eukaryotes - 5007 (source: NCBI BLink). & (gnl|cdd|37135 : 95.1) no description available & (reliability: 640.0) & (original description: Putative At1g11070, Description = Putative ovule protein, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'nbv0.5scaffold848_269505-280170' '(at1g04080 : 746.0) PRP39; INVOLVED IN: regulation of timing of transition from vegetative to reproductive phase; LOCATED IN: intracellular; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G46400.1). & (gnl|cdd|36472 : 509.0) no description available & (reliability: 1492.0) & (original description: Putative PRP39, Description = Pre-mRNA-processing factor 39, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'nbv0.5scaffold886_310895-317083' '(at3g25690 : 947.0) actin binding protein required for normal chloroplast positioning; CHLOROPLAST UNUSUAL POSITIONING 1 (CHUP1); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G18570.1). & (reliability: 1894.0) & (original description: Putative CHUP1, Description = Protein CHUP1, chloroplastic, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'nbv0.5scaffold1470_348090-351388' '(at5g65660 : 111.0) hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative At5g65660, Description = Uncharacterized protein At5g65660, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'nbv0.5scaffold1917_13111-24935' '(at1g21580 : 452.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 6412 Blast hits to 4180 proteins in 441 species: Archae - 2; Bacteria - 615; Metazoa - 1993; Fungi - 936; Plants - 1540; Viruses - 149; Other Eukaryotes - 1177 (source: NCBI BLink). & (gnl|cdd|36705 : 103.0) no description available & (reliability: 904.0) & (original description: Putative zc3h3, Description = Zinc finger CCCH domain-containing protein 3, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'nbv0.5scaffold1918_265513-276522' '(at1g63830 : 314.0) PLAC8 family protein; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT5G41390.1). & (reliability: 620.0) & (original description: Putative Os03g0123600, Description = Os03g0123600 protein, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'nbv0.5scaffold2075_339802-343718' '(at5g57070 : 102.0) hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G72790.1); Has 43553 Blast hits to 23221 proteins in 1113 species: Archae - 87; Bacteria - 4345; Metazoa - 18926; Fungi - 6211; Plants - 7264; Viruses - 1427; Other Eukaryotes - 5293 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative PGSC0003DMG400016079, Description = Hydroxyproline-rich glycoprotein family protein, PFAM = PF05553)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'nbv0.5scaffold2297_29891-34572' '(at1g14710 : 112.0) hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G02940.1); Has 6006 Blast hits to 3456 proteins in 374 species: Archae - 2; Bacteria - 410; Metazoa - 1957; Fungi - 511; Plants - 1958; Viruses - 385; Other Eukaryotes - 783 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative pco147635a, Description = Hydroxyproline-rich glycoprotein family protein, putative isoform 1, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'nbv0.5scaffold3304_58767-64391' '(at5g41390 : 270.0) PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT1G63830.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 520.0) & (original description: Putative At1g63830, Description = PLAC8 family protein, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'nbv0.5scaffold4592_142957-146828' '(at5g57070 : 98.6) hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G72790.1); Has 43553 Blast hits to 23221 proteins in 1113 species: Archae - 87; Bacteria - 4345; Metazoa - 18926; Fungi - 6211; Plants - 7264; Viruses - 1427; Other Eukaryotes - 5293 (source: NCBI BLink). & (reliability: 197.2) & (original description: Putative PGSC0003DMG400016079, Description = , PFAM = PF05553)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben044scf00001915ctg000_382-3678' '(at1g72790 : 85.5) hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G57070.1); Has 16953 Blast hits to 10626 proteins in 654 species: Archae - 27; Bacteria - 1228; Metazoa - 7030; Fungi - 2381; Plants - 3856; Viruses - 536; Other Eukaryotes - 1895 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative At5g57070, Description = Putative formin-like protein 20-like, PFAM = PF05553)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben044scf00002192ctg002_20423-25161' '(at1g14710 : 214.0) hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G02940.1); Has 6006 Blast hits to 3456 proteins in 374 species: Archae - 2; Bacteria - 410; Metazoa - 1957; Fungi - 511; Plants - 1958; Viruses - 385; Other Eukaryotes - 783 (source: NCBI BLink). & (gnl|cdd|39378 : 128.0) no description available & (reliability: 428.0) & (original description: Putative pco147635a, Description = Putative uncharacterized protein Sb01g041520, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben044scf00002192ctg003_1-4730' '(at1g14710 : 151.0) hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G02940.1); Has 6006 Blast hits to 3456 proteins in 374 species: Archae - 2; Bacteria - 410; Metazoa - 1957; Fungi - 511; Plants - 1958; Viruses - 385; Other Eukaryotes - 783 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative pco147635a, Description = Putative uncharacterized protein Sb01g041520, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben044scf00004813ctg020_1-2821' '(at5g57070 : 94.4) hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G72790.1); Has 43553 Blast hits to 23221 proteins in 1113 species: Archae - 87; Bacteria - 4345; Metazoa - 18926; Fungi - 6211; Plants - 7264; Viruses - 1427; Other Eukaryotes - 5293 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative PGSC0003DMG400016079, Description = Hydroxyproline-rich glycoprotein, PFAM = PF05553)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben044scf00011678ctg000_1251-9158' '(at3g14010 : 340.0) hydroxyproline-rich glycoprotein family protein, similar to Mrs16p (GI:2737884) (Saccharomyces cerevisiae); weak similarity to ataxin-2 related protein (GI:1679686) (Homo sapiens). Included in a family of CTC interacting domain proteins found to interact with PAB2.; CTC-interacting domain 4 (CID4); FUNCTIONS IN: protein binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LsmAD domain (InterPro:IPR009604), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 3 (TAIR:AT1G54170.1). & (gnl|cdd|37586 : 157.0) no description available & (gnl|cdd|34779 : 104.0) no description available & (reliability: 680.0) & (original description: Putative CID4, Description = Polyadenylate-binding protein-interacting protein 4, PFAM = PF06741;PF14438)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben044scf00011780ctg009_13892-18355' '(at1g15130 : 171.0) Endosomal targeting BRO1-like domain-containing protein; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); Has 26948 Blast hits to 15985 proteins in 1003 species: Archae - 32; Bacteria - 2662; Metazoa - 9770; Fungi - 4642; Plants - 6039; Viruses - 612; Other Eukaryotes - 3191 (source: NCBI BLink). & (gnl|cdd|37431 : 80.0) no description available & (reliability: 342.0) & (original description: Putative BnaA06g38310D, Description = BnaA06g38310D protein, PFAM = PF13949)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben044scf00015409ctg009_1-9572' '(at3g29390 : 330.0) Nuclear localized K-homology containing protein that interacts with AS1.; RS2-interacting KH protein (RIK); FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; Has 9708 Blast hits to 6008 proteins in 528 species: Archae - 14; Bacteria - 833; Metazoa - 2799; Fungi - 1318; Plants - 2564; Viruses - 582; Other Eukaryotes - 1598 (source: NCBI BLink). & (reliability: 660.0) & (original description: Putative RIK, Description = Protein RIK, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben044scf00016608ctg011_14664-19208' '(at5g41390 : 256.0) PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT1G63830.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative PGSC0003DMG400004981, Description = PLAC8 family protein, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben044scf00017354ctg000_992-12459' '(at1g04080 : 767.0) PRP39; INVOLVED IN: regulation of timing of transition from vegetative to reproductive phase; LOCATED IN: intracellular; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G46400.1). & (gnl|cdd|36472 : 499.0) no description available & (reliability: 1534.0) & (original description: Putative PRP39, Description = Pre-mRNA-processing factor 39, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben044scf00026116ctg004_3221-9289' '(at4g01050 : 331.0) hydroxyproline-rich glycoprotein family protein, contains a rhodanese homology domain. Required for anchoring the FNR flavoenzyme to the thylakoid membranes and sustaining high efficiency photosynthetic linear electron flow.; thylakoid rhodanese-like (TROL); FUNCTIONS IN: protein binding; INVOLVED IN: defense response to bacterium, photosynthetic electron transport in photosystem II; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT3G25480.1); Has 6015 Blast hits to 4196 proteins in 851 species: Archae - 23; Bacteria - 2268; Metazoa - 876; Fungi - 517; Plants - 614; Viruses - 167; Other Eukaryotes - 1550 (source: NCBI BLink). & (reliability: 662.0) & (original description: Putative STR4, Description = Rhodanese-like domain-containing protein 4, chloroplastic, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben044scf00029380ctg004_2823-9726' '(at3g25690 : 963.0) actin binding protein required for normal chloroplast positioning; CHLOROPLAST UNUSUAL POSITIONING 1 (CHUP1); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G18570.1). & (reliability: 1926.0) & (original description: Putative CHUP1, Description = Protein CHUP1, chloroplastic, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben044scf00031388ctg005_45741-53508' '(at4g26750 : 303.0) hydroxyproline-rich glycoprotein family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: glucan synthase-like 11 (TAIR:AT3G59100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36135 : 211.0) no description available & (gnl|cdd|86706 : 210.0) no description available & (reliability: 606.0) & (original description: Putative LIP5, Description = Protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5, PFAM = PF04652)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben044scf00032591ctg023_7568-13757' '(at3g25690 : 950.0) actin binding protein required for normal chloroplast positioning; CHLOROPLAST UNUSUAL POSITIONING 1 (CHUP1); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G18570.1). & (reliability: 1900.0) & (original description: Putative CHUP1A, Description = Chloroplast unusual positioning 1A, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben044scf00041118ctg003_25255-28577' '(at5g02850 : 295.0) hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med4 (InterPro:IPR019258); Has 258 Blast hits to 243 proteins in 75 species: Archae - 0; Bacteria - 23; Metazoa - 102; Fungi - 36; Plants - 37; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (reliability: 590.0) & (original description: Putative MED4, Description = Mediator of RNA polymerase II transcription subunit 4, PFAM = PF10018)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben044scf00046256ctg005_6125-10100' '(at5g41390 : 243.0) PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT1G63830.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative At1g63830, Description = PLAC8 family protein, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben044scf00046384ctg001_16891-20662' '(at4g04980 : 295.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11070.1); Has 23100 Blast hits to 15699 proteins in 1063 species: Archae - 116; Bacteria - 2262; Metazoa - 8308; Fungi - 3268; Plants - 3181; Viruses - 958; Other Eukaryotes - 5007 (source: NCBI BLink). & (gnl|cdd|37135 : 97.8) no description available & (reliability: 590.0) & (original description: Putative At1g11070, Description = Putative ovule protein, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf00059_297632-300441' '(at1g49330 : 198.0) hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G16190.1); Has 882 Blast hits to 731 proteins in 140 species: Archae - 0; Bacteria - 49; Metazoa - 218; Fungi - 71; Plants - 381; Viruses - 66; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf00367_1106144-1109013' '(at1g49330 : 197.0) hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G16190.1); Has 882 Blast hits to 731 proteins in 140 species: Archae - 0; Bacteria - 49; Metazoa - 218; Fungi - 71; Plants - 381; Viruses - 66; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf00457_451648-457594' '(at2g32600 : 330.0) hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, intracellular, spliceosomal complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type matrin (InterPro:IPR000690); Has 18078 Blast hits to 8181 proteins in 576 species: Archae - 26; Bacteria - 1885; Metazoa - 7255; Fungi - 1800; Plants - 3678; Viruses - 906; Other Eukaryotes - 2528 (source: NCBI BLink). & (gnl|cdd|35448 : 325.0) no description available & (gnl|cdd|34843 : 199.0) no description available & (reliability: 660.0) & (original description: Putative spl2, Description = Splicing factor 3a, subunit 2, PFAM = PF12874;PF16835)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf00595_1943-9186' '(at5g52430 : 291.0) hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT4G25620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 582.0) & (original description: Putative At1g76660, Description = Uncharacterized protein At1g76660, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf00611_459524-463456' '(at5g57070 : 101.0) hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G72790.1); Has 43553 Blast hits to 23221 proteins in 1113 species: Archae - 87; Bacteria - 4345; Metazoa - 18926; Fungi - 6211; Plants - 7264; Viruses - 1427; Other Eukaryotes - 5293 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative PGSC0003DMG400016079, Description = Hydroxyproline-rich glycoprotein, PFAM = PF05553)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf00747_255484-261568' '(at3g14010 : 298.0) hydroxyproline-rich glycoprotein family protein, similar to Mrs16p (GI:2737884) (Saccharomyces cerevisiae); weak similarity to ataxin-2 related protein (GI:1679686) (Homo sapiens). Included in a family of CTC interacting domain proteins found to interact with PAB2.; CTC-interacting domain 4 (CID4); FUNCTIONS IN: protein binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LsmAD domain (InterPro:IPR009604), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 3 (TAIR:AT1G54170.1). & (gnl|cdd|37586 : 139.0) no description available & (gnl|cdd|34779 : 106.0) no description available & (reliability: 596.0) & (original description: Putative CID3, Description = BnaC03g38270D protein, PFAM = PF14438;PF06741)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf00817_558018-565979' '(at4g01050 : 368.0) hydroxyproline-rich glycoprotein family protein, contains a rhodanese homology domain. Required for anchoring the FNR flavoenzyme to the thylakoid membranes and sustaining high efficiency photosynthetic linear electron flow.; thylakoid rhodanese-like (TROL); FUNCTIONS IN: protein binding; INVOLVED IN: defense response to bacterium, photosynthetic electron transport in photosystem II; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT3G25480.1); Has 6015 Blast hits to 4196 proteins in 851 species: Archae - 23; Bacteria - 2268; Metazoa - 876; Fungi - 517; Plants - 614; Viruses - 167; Other Eukaryotes - 1550 (source: NCBI BLink). & (reliability: 736.0) & (original description: Putative STR4, Description = Rhodanese-like domain-containing protein 4, chloroplastic, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf00821_1613841-1623837' '(at2g33490 : 370.0) hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G26910.1); Has 1387 Blast hits to 1097 proteins in 177 species: Archae - 4; Bacteria - 37; Metazoa - 593; Fungi - 281; Plants - 163; Viruses - 19; Other Eukaryotes - 290 (source: NCBI BLink). & (reliability: 740.0) & (original description: Putative At2g33490, Description = Uncharacterized protein At2g33490, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf00870_1489251-1499763' '(at1g54170 : 356.0) ataxin-2-related, similar to SCA2 (GI:1770390) (Homo sapiens); similar to ataxin-2 (GI:3005020) (Mus musculus). Member of a family of PAM2 motif containing proteins.; CTC-interacting domain 3 (CID3); CONTAINS InterPro DOMAIN/s: LsmAD domain (InterPro:IPR009604), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 4 (TAIR:AT3G14010.3); Has 939 Blast hits to 759 proteins in 220 species: Archae - 0; Bacteria - 26; Metazoa - 423; Fungi - 216; Plants - 125; Viruses - 0; Other Eukaryotes - 149 (source: NCBI BLink). & (gnl|cdd|37586 : 144.0) no description available & (gnl|cdd|34779 : 100.0) no description available & (reliability: 710.0) & (original description: Putative CID4, Description = Polyadenylate-binding protein-interacting protein 4, PFAM = PF06741;PF14438)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf01055_57601-66662' '(at2g33490 : 318.0) hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G26910.1); Has 1387 Blast hits to 1097 proteins in 177 species: Archae - 4; Bacteria - 37; Metazoa - 593; Fungi - 281; Plants - 163; Viruses - 19; Other Eukaryotes - 290 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative Sb06g014370, Description = Putative uncharacterized protein Sb06g014370, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf01252_490692-493495' '(at2g22180 : 87.0) hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT4G39745.1); Has 202 Blast hits to 201 proteins in 27 species: Archae - 0; Bacteria - 2; Metazoa - 9; Fungi - 3; Plants - 182; Viruses - 2; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative PGSC0003DMG400021819, Description = , PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf01409_131328-141336' '(at2g18910 : 95.5) hydroxyproline-rich glycoprotein family protein; Has 87 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 2; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 191.0) & (original description: Putative)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf01752_621151-628791' '(at4g26750 : 307.0) hydroxyproline-rich glycoprotein family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: glucan synthase-like 11 (TAIR:AT3G59100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36135 : 219.0) no description available & (gnl|cdd|86706 : 214.0) no description available & (reliability: 614.0) & (original description: Putative LIP5, Description = Protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5, PFAM = PF04652)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf01825_209093-211893' '(at2g22180 : 81.6) hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT4G39745.1); Has 202 Blast hits to 201 proteins in 27 species: Archae - 0; Bacteria - 2; Metazoa - 9; Fungi - 3; Plants - 182; Viruses - 2; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative PGSC0003DMG400020617, Description = , PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf02053_314533-317831' '(at5g65660 : 103.0) hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative At5g65660, Description = Uncharacterized protein At5g65660 family, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf02053_357665-360602' '(at5g65660 : 85.9) hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative At5g65660, Description = Uncharacterized protein At5g65660, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf02340_539158-546222' '(at4g04980 : 289.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11070.1); Has 23100 Blast hits to 15699 proteins in 1063 species: Archae - 116; Bacteria - 2262; Metazoa - 8308; Fungi - 3268; Plants - 3181; Viruses - 958; Other Eukaryotes - 5007 (source: NCBI BLink). & (gnl|cdd|37135 : 82.7) no description available & (reliability: 578.0) & (original description: Putative MTR_4g089110, Description = Hydroxyproline-rich glycoprotein family protein, putative, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf02425_682001-685920' '(at5g57070 : 99.0) hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G72790.1); Has 43553 Blast hits to 23221 proteins in 1113 species: Archae - 87; Bacteria - 4345; Metazoa - 18926; Fungi - 6211; Plants - 7264; Viruses - 1427; Other Eukaryotes - 5293 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative PGSC0003DMG400016079, Description = Hydroxyproline-rich glycoprotein family protein, PFAM = PF05553)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf02475_879780-885498' '(at2g39050 : 198.0) hydroxyproline-rich glycoprotein family protein; CONTAINS InterPro DOMAIN/s: Ricin B-related lectin (InterPro:IPR008997), Ricin B lectin (InterPro:IPR000772); Has 1708 Blast hits to 1449 proteins in 222 species: Archae - 0; Bacteria - 47; Metazoa - 514; Fungi - 386; Plants - 615; Viruses - 5; Other Eukaryotes - 141 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative PGSC0003DMG401000859, Description = At2g39050/T7F6.22, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf02740_1104065-1107089' '(at5g65660 : 120.0) hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative At5g65660, Description = Uncharacterized protein At5g65660, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf02831_19344-29741' '(at3g14010 : 351.0) hydroxyproline-rich glycoprotein family protein, similar to Mrs16p (GI:2737884) (Saccharomyces cerevisiae); weak similarity to ataxin-2 related protein (GI:1679686) (Homo sapiens). Included in a family of CTC interacting domain proteins found to interact with PAB2.; CTC-interacting domain 4 (CID4); FUNCTIONS IN: protein binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LsmAD domain (InterPro:IPR009604), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 3 (TAIR:AT1G54170.1). & (gnl|cdd|37586 : 152.0) no description available & (gnl|cdd|34779 : 99.5) no description available & (reliability: 702.0) & (original description: Putative CID4, Description = Polyadenylate-binding protein-interacting protein 4, PFAM = PF06741;PF14438)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf02831_234075-237832' '(at1g72790 : 84.7) hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G57070.1); Has 16953 Blast hits to 10626 proteins in 654 species: Archae - 27; Bacteria - 1228; Metazoa - 7030; Fungi - 2381; Plants - 3856; Viruses - 536; Other Eukaryotes - 1895 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative At5g57070, Description = Putative formin-like protein 20-like, PFAM = PF05553)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf02835_49268-53566' '(at1g21090 : 189.0) Cupredoxin superfamily protein; CONTAINS InterPro DOMAIN/s: Cupredoxin (InterPro:IPR008972); Has 232 Blast hits to 228 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 16; Fungi - 9; Plants - 195; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative At1g21090, Description = At1g21090, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf02881_75669-87779' '(at1g73840 : 119.0) Resembles the CstF64 family of RNA processing factors that are conserved between yeast and mammals. In mammals, CstF64 is a component of the CstF complex which is required for mRNA 3'end formation along with other factors.; ENHANCED SILENCING PHENOTYPE 1 (ESP1); BEST Arabidopsis thaliana protein match is: cleavage stimulating factor 64 (TAIR:AT1G71800.1); Has 17088 Blast hits to 12613 proteins in 677 species: Archae - 8; Bacteria - 992; Metazoa - 8093; Fungi - 4211; Plants - 1941; Viruses - 196; Other Eukaryotes - 1647 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative ESP1, Description = Putative proline-rich protein, PFAM = PF14327;PF14304)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf03937_306875-313569' '(at1g10790 : 169.0) BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G56590.2); Has 78 Blast hits to 78 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative T16B5.7, Description = F20B24.21, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf03965_66116-85461' '(at3g13990 : 430.0) Kinase-related protein of unknown function (DUF1296); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1296 (InterPro:IPR009719); BEST Arabidopsis thaliana protein match is: Kinase-related protein of unknown function (DUF1296) (TAIR:AT3G07660.1); Has 533 Blast hits to 488 proteins in 109 species: Archae - 0; Bacteria - 10; Metazoa - 210; Fungi - 72; Plants - 159; Viruses - 3; Other Eukaryotes - 79 (source: NCBI BLink). & (gnl|cdd|70439 : 98.1) no description available & (reliability: 860.0) & (original description: Putative At3g13990, Description = AT3g13990/MDC16_11, PFAM = PF06972)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf03969_106878-113478' '(at3g25690 : 305.0) actin binding protein required for normal chloroplast positioning; CHLOROPLAST UNUSUAL POSITIONING 1 (CHUP1); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G18570.1). & (reliability: 610.0) & (original description: Putative Sb07g002450, Description = Putative uncharacterized protein Sb07g002450, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf04018_1024709-1028523' '(at5g57070 : 94.0) hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G72790.1); Has 43553 Blast hits to 23221 proteins in 1113 species: Archae - 87; Bacteria - 4345; Metazoa - 18926; Fungi - 6211; Plants - 7264; Viruses - 1427; Other Eukaryotes - 5293 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative TCM_037590, Description = Hydroxyproline-rich glycoprotein family protein, PFAM = PF05553)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf04109_332211-336829' '(at1g15130 : 174.0) Endosomal targeting BRO1-like domain-containing protein; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); Has 26948 Blast hits to 15985 proteins in 1003 species: Archae - 32; Bacteria - 2662; Metazoa - 9770; Fungi - 4642; Plants - 6039; Viruses - 612; Other Eukaryotes - 3191 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative HMA9, Description = ALIX V-shaped domain-containing protein, PFAM = PF13949)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf04109_332569-344247' '(at1g15130 : 1025.0) Endosomal targeting BRO1-like domain-containing protein; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); Has 26948 Blast hits to 15985 proteins in 1003 species: Archae - 32; Bacteria - 2662; Metazoa - 9770; Fungi - 4642; Plants - 6039; Viruses - 612; Other Eukaryotes - 3191 (source: NCBI BLink). & (gnl|cdd|37431 : 499.0) no description available & (gnl|cdd|86235 : 389.0) no description available & (reliability: 2050.0) & (original description: Putative HMA9, Description = ALG2-interacting protein X, PFAM = PF03097;PF13949)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf04384_65807-72525' '(at4g04980 : 298.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11070.1); Has 23100 Blast hits to 15699 proteins in 1063 species: Archae - 116; Bacteria - 2262; Metazoa - 8308; Fungi - 3268; Plants - 3181; Viruses - 958; Other Eukaryotes - 5007 (source: NCBI BLink). & (gnl|cdd|37135 : 92.8) no description available & (reliability: 596.0) & (original description: Putative At1g11070, Description = Putative ovule protein, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf04396_431924-438168' '(at1g53645 : 252.0) hydroxyproline-rich glycoprotein family protein; Has 15375 Blast hits to 12179 proteins in 920 species: Archae - 8; Bacteria - 1425; Metazoa - 5915; Fungi - 2848; Plants - 1527; Viruses - 230; Other Eukaryotes - 3422 (source: NCBI BLink). & (reliability: 504.0) & (original description: Putative At1g53645, Description = BnaC06g06470D protein, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf04950_729569-732765' '(at5g02850 : 285.0) hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med4 (InterPro:IPR019258); Has 258 Blast hits to 243 proteins in 75 species: Archae - 0; Bacteria - 23; Metazoa - 102; Fungi - 36; Plants - 37; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (reliability: 570.0) & (original description: Putative MED4, Description = Mediator of RNA polymerase II transcription subunit 4, PFAM = PF10018)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf04973_180732-192386' '(at1g15130 : 1021.0) Endosomal targeting BRO1-like domain-containing protein; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); Has 26948 Blast hits to 15985 proteins in 1003 species: Archae - 32; Bacteria - 2662; Metazoa - 9770; Fungi - 4642; Plants - 6039; Viruses - 612; Other Eukaryotes - 3191 (source: NCBI BLink). & (gnl|cdd|37431 : 504.0) no description available & (gnl|cdd|86235 : 391.0) no description available & (reliability: 2042.0) & (original description: Putative HMA9, Description = ALG2-interacting protein X, PFAM = PF13949;PF03097)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf04988_334680-341509' '(at5g52430 : 227.0) hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT4G25620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative PGSC0003DMG400029308, Description = Hydroxyproline-rich glycoprotein family protein, putative, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf05012_156322-165203' '(at4g01050 : 361.0) hydroxyproline-rich glycoprotein family protein, contains a rhodanese homology domain. Required for anchoring the FNR flavoenzyme to the thylakoid membranes and sustaining high efficiency photosynthetic linear electron flow.; thylakoid rhodanese-like (TROL); FUNCTIONS IN: protein binding; INVOLVED IN: defense response to bacterium, photosynthetic electron transport in photosystem II; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT3G25480.1); Has 6015 Blast hits to 4196 proteins in 851 species: Archae - 23; Bacteria - 2268; Metazoa - 876; Fungi - 517; Plants - 614; Viruses - 167; Other Eukaryotes - 1550 (source: NCBI BLink). & (reliability: 722.0) & (original description: Putative TROL, Description = Os02g0257300 protein, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf05080_113575-119026' '(at4g26750 : 308.0) hydroxyproline-rich glycoprotein family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: glucan synthase-like 11 (TAIR:AT3G59100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36135 : 205.0) no description available & (gnl|cdd|86706 : 178.0) no description available & (reliability: 616.0) & (original description: Putative LIP5, Description = Protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5, PFAM = PF04652)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf05118_1200306-1205379' '(at1g63830 : 288.0) PLAC8 family protein; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT5G41390.1). & (reliability: 570.0) & (original description: Putative Os03g0123600, Description = Os03g0123600 protein, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf05430_41604-45708' '(at1g21090 : 184.0) Cupredoxin superfamily protein; CONTAINS InterPro DOMAIN/s: Cupredoxin (InterPro:IPR008972); Has 232 Blast hits to 228 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 16; Fungi - 9; Plants - 195; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative At1g21090, Description = At1g21090, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf05670_878-3729' '(at1g49330 : 196.0) hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G16190.1); Has 882 Blast hits to 731 proteins in 140 species: Archae - 0; Bacteria - 49; Metazoa - 218; Fungi - 71; Plants - 381; Viruses - 66; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf05732_266800-275439' '(at1g10790 : 146.0) BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G56590.2); Has 78 Blast hits to 78 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative BnaA06g06620D, Description = BnaA06g06620D protein, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf06537_40435-45455' '(at1g73840 : 116.0) Resembles the CstF64 family of RNA processing factors that are conserved between yeast and mammals. In mammals, CstF64 is a component of the CstF complex which is required for mRNA 3'end formation along with other factors.; ENHANCED SILENCING PHENOTYPE 1 (ESP1); BEST Arabidopsis thaliana protein match is: cleavage stimulating factor 64 (TAIR:AT1G71800.1); Has 17088 Blast hits to 12613 proteins in 677 species: Archae - 8; Bacteria - 992; Metazoa - 8093; Fungi - 4211; Plants - 1941; Viruses - 196; Other Eukaryotes - 1647 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative ESP1, Description = Putative proline-rich protein, PFAM = PF14327;PF14304)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf07070_26288-29588' '(at5g02850 : 289.0) hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med4 (InterPro:IPR019258); Has 258 Blast hits to 243 proteins in 75 species: Archae - 0; Bacteria - 23; Metazoa - 102; Fungi - 36; Plants - 37; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (reliability: 578.0) & (original description: Putative MED4, Description = Vitamin-D-receptor interacting mediator subunit 4, PFAM = PF10018)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf07576_83434-89058' '(at5g41390 : 295.0) PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT1G63830.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 586.0) & (original description: Putative Os03g0123600, Description = Os03g0123600 protein, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf07576_83455-89139' '(at5g41390 : 288.0) PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT1G63830.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 576.0) & (original description: Putative At1g63830, Description = PLAC8 family protein, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf09234_45935-51911' '(at1g53645 : 255.0) hydroxyproline-rich glycoprotein family protein; Has 15375 Blast hits to 12179 proteins in 920 species: Archae - 8; Bacteria - 1425; Metazoa - 5915; Fungi - 2848; Plants - 1527; Viruses - 230; Other Eukaryotes - 3422 (source: NCBI BLink). & (reliability: 510.0) & (original description: Putative At1g53645, Description = BnaC06g06470D protein, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf09260_26912-36853' '(at1g14710 : 351.0) hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G02940.1); Has 6006 Blast hits to 3456 proteins in 374 species: Archae - 2; Bacteria - 410; Metazoa - 1957; Fungi - 511; Plants - 1958; Viruses - 385; Other Eukaryotes - 783 (source: NCBI BLink). & (gnl|cdd|39378 : 157.0) no description available & (reliability: 702.0) & (original description: Putative At1g14710, Description = Hydroxyproline-rich glycoprotein-like protein, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf10616_148488-158144' '(at3g29390 : 327.0) Nuclear localized K-homology containing protein that interacts with AS1.; RS2-interacting KH protein (RIK); FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; Has 9708 Blast hits to 6008 proteins in 528 species: Archae - 14; Bacteria - 833; Metazoa - 2799; Fungi - 1318; Plants - 2564; Viruses - 582; Other Eukaryotes - 1598 (source: NCBI BLink). & (reliability: 654.0) & (original description: Putative RIK, Description = Protein RIK, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf11535_92434-104167' '(at1g04080 : 773.0) PRP39; INVOLVED IN: regulation of timing of transition from vegetative to reproductive phase; LOCATED IN: intracellular; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G46400.1). & (gnl|cdd|36472 : 512.0) no description available & (reliability: 1546.0) & (original description: Putative PRP39, Description = Pre-mRNA-processing factor 39, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf11689_392340-398772' '(at5g52430 : 231.0) hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT4G25620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative PGSC0003DMG400029308, Description = Hydroxyproline-rich glycoprotein family protein, putative, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf11782_321093-332639' '(at5g41390 : 301.0) PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT1G63830.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 576.0) & (original description: Putative Os03g0123600, Description = Os03g0123600 protein, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf12199_74017-90999' '(at4g04980 : 322.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11070.1); Has 23100 Blast hits to 15699 proteins in 1063 species: Archae - 116; Bacteria - 2262; Metazoa - 8308; Fungi - 3268; Plants - 3181; Viruses - 958; Other Eukaryotes - 5007 (source: NCBI BLink). & (gnl|cdd|37135 : 94.7) no description available & (reliability: 644.0) & (original description: Putative PGSC0003DMG400022806, Description = Hydroxyproline-rich glycoprotein family protein, putative, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf12308_50281-63602' '(at1g15130 : 1010.0) Endosomal targeting BRO1-like domain-containing protein; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); Has 26948 Blast hits to 15985 proteins in 1003 species: Archae - 32; Bacteria - 2662; Metazoa - 9770; Fungi - 4642; Plants - 6039; Viruses - 612; Other Eukaryotes - 3191 (source: NCBI BLink). & (gnl|cdd|37431 : 511.0) no description available & (gnl|cdd|86235 : 381.0) no description available & (reliability: 2020.0) & (original description: Putative HMA9, Description = ALG2-interacting protein X, PFAM = PF03097;PF13949)' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf15689_77990-85308' '(at5g41390 : 157.0) PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT1G63830.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative At1g63830, Description = PLAC8 family protein, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf15710_19740-29239' '(at1g14710 : 323.0) hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G02940.1); Has 6006 Blast hits to 3456 proteins in 374 species: Archae - 2; Bacteria - 410; Metazoa - 1957; Fungi - 511; Plants - 1958; Viruses - 385; Other Eukaryotes - 783 (source: NCBI BLink). & (gnl|cdd|39378 : 143.0) no description available & (reliability: 646.0) & (original description: Putative At1g14710, Description = Putative uncharacterized protein Sb01g041520, PFAM = )' T '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'niben101scf20969_32510-41529' '(at1g32610 : 105.0) hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT2G35230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative IKU1, Description = AtVQ14, PFAM = PF05678)' T '35.1.42' 'not assigned.no ontology.proline rich family' 'nbv0.3scaffold3491_33290-38222' '(at2g16630 : 152.0) Pollen Ole e 1 allergen and extensin family protein; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative BnaC09g09070D, Description = BnaC09g09070D protein, PFAM = PF01190)' T '35.1.42' 'not assigned.no ontology.proline rich family' 'nbv0.3scaffold10117_6434-11507' '(at1g63830 : 286.0) PLAC8 family protein; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT5G41390.1). & (reliability: 572.0) & (original description: Putative F16G20.170, Description = Putative uncharacterized protein AT4g23470, PFAM = )' T '35.1.42' 'not assigned.no ontology.proline rich family' 'nbv0.3scaffold10888_1465-8185' '(at4g18570 : 380.0) Tetratricopeptide repeat (TPR)-like superfamily protein; BEST Arabidopsis thaliana protein match is: Hydroxyproline-rich glycoprotein family protein (TAIR:AT3G25690.3); Has 41355 Blast hits to 22856 proteins in 1198 species: Archae - 106; Bacteria - 4898; Metazoa - 15706; Fungi - 4501; Plants - 9175; Viruses - 1532; Other Eukaryotes - 5437 (source: NCBI BLink). & (reliability: 760.0) & (original description: Putative CHUP1, Description = Protein CHUP1, chloroplastic, PFAM = )' T '35.1.42' 'not assigned.no ontology.proline rich family' 'nbv0.3scaffold18258_562-6911' '(at3g25690 : 305.0) actin binding protein required for normal chloroplast positioning; CHLOROPLAST UNUSUAL POSITIONING 1 (CHUP1); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G18570.1). & (reliability: 576.0) & (original description: Putative Sb07g002450, Description = Putative uncharacterized protein Sb07g002450, PFAM = )' T '35.1.42' 'not assigned.no ontology.proline rich family' 'nbv0.3scaffold22912_18216-21317' '(at4g23930 : 128.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT1G64450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative BnaA09g12240D, Description = BnaA09g12240D protein, PFAM = PF03168)' T '35.1.42' 'not assigned.no ontology.proline rich family' 'nbv0.3scaffold23878_13096-16704' '(at5g41390 : 151.0) PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT1G63830.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative At1g63830, Description = PLAC8 family protein, PFAM = )' T '35.1.42' 'not assigned.no ontology.proline rich family' 'nbv0.3scaffold98410_1-4235' '(at5g07020 : 159.0) proline-rich family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative TCM_044749, Description = Proline-rich family protein, PFAM = )' T '35.1.42' 'not assigned.no ontology.proline rich family' 'nbv0.5scaffold282_753161-756221' '(at4g23930 : 125.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT1G64450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative BnaA09g12240D, Description = BnaA09g12240D protein, PFAM = PF03168)' T '35.1.42' 'not assigned.no ontology.proline rich family' 'nbv0.5scaffold1918_265513-276522' '(at1g63830 : 314.0) PLAC8 family protein; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT5G41390.1). & (reliability: 628.0) & (original description: Putative Os03g0123600, Description = Os03g0123600 protein, PFAM = )' T '35.1.42' 'not assigned.no ontology.proline rich family' 'nbv0.5scaffold2953_241036-253521' '(at1g21320 : 134.0) nucleotide binding;nucleic acid binding; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G76940.1); Has 568 Blast hits to 568 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 270; Fungi - 126; Plants - 140; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative NSRA, Description = Nuclear speckle RNA-binding protein A, PFAM = PF00076)' T '35.1.42' 'not assigned.no ontology.proline rich family' 'nbv0.5scaffold3304_58767-64391' '(at5g41390 : 270.0) PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT1G63830.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative At1g63830, Description = PLAC8 family protein, PFAM = )' T '35.1.42' 'not assigned.no ontology.proline rich family' 'niben044scf00002297ctg009_6546-9910' '(at4g23930 : 128.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT1G64450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative BnaA09g12240D, Description = BnaA09g12240D protein, PFAM = PF03168)' T '35.1.42' 'not assigned.no ontology.proline rich family' 'niben044scf00016608ctg011_14664-19208' '(at5g41390 : 256.0) PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT1G63830.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 510.0) & (original description: Putative PGSC0003DMG400004981, Description = PLAC8 family protein, PFAM = )' T '35.1.42' 'not assigned.no ontology.proline rich family' 'niben044scf00027044ctg004_373-7273' '(at3g60320 : 591.0) Protein of unknown function (DUF630 and DUF632); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT1G02110.1); Has 6322 Blast hits to 3163 proteins in 311 species: Archae - 2; Bacteria - 139; Metazoa - 1165; Fungi - 535; Plants - 1058; Viruses - 107; Other Eukaryotes - 3316 (source: NCBI BLink). & (gnl|cdd|68357 : 347.0) no description available & (reliability: 1148.0) & (original description: Putative bZIP80, Description = BZIP transcription factor bZIP80, PFAM = PF04782;PF04783)' T '35.1.42' 'not assigned.no ontology.proline rich family' 'niben044scf00043468ctg003_2067-8242' '(at2g40070 : 137.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1); Has 108635 Blast hits to 60786 proteins in 2176 species: Archae - 287; Bacteria - 15142; Metazoa - 39415; Fungi - 26849; Plants - 4416; Viruses - 2864; Other Eukaryotes - 19662 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative RCOM_0593150, Description = ATP binding protein, putative, PFAM = )' T '35.1.42' 'not assigned.no ontology.proline rich family' 'niben044scf00044962ctg004_1187-5024' '(at5g67610 : 120.0) Uncharacterized conserved protein (DUF2215); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2215 (InterPro:IPR019358); BEST Arabidopsis thaliana protein match is: Uncharacterized conserved protein (DUF2215) (TAIR:AT3G49840.1); Has 145 Blast hits to 145 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 61; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative At3g49840, Description = BnaA06g24920D protein, PFAM = PF10225)' T '35.1.42' 'not assigned.no ontology.proline rich family' 'niben044scf00046256ctg005_6125-10100' '(at5g41390 : 243.0) PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT1G63830.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 474.0) & (original description: Putative At1g63830, Description = PLAC8 family protein, PFAM = )' T '35.1.42' 'not assigned.no ontology.proline rich family' 'niben101scf00211_105348-111118' '(at2g16630 : 157.0) Pollen Ole e 1 allergen and extensin family protein; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative BnaC09g09070D, Description = BnaC09g09070D protein, PFAM = PF01190)' T '35.1.42' 'not assigned.no ontology.proline rich family' 'niben101scf01228_431893-438613' '(at4g18570 : 386.0) Tetratricopeptide repeat (TPR)-like superfamily protein; BEST Arabidopsis thaliana protein match is: Hydroxyproline-rich glycoprotein family protein (TAIR:AT3G25690.3); Has 41355 Blast hits to 22856 proteins in 1198 species: Archae - 106; Bacteria - 4898; Metazoa - 15706; Fungi - 4501; Plants - 9175; Viruses - 1532; Other Eukaryotes - 5437 (source: NCBI BLink). & (reliability: 772.0) & (original description: Putative At4g18570, Description = AT4g18560/F28J12_220, PFAM = )' T '35.1.42' 'not assigned.no ontology.proline rich family' 'niben101scf01550_193375-208215' '(at1g21320 : 140.0) nucleotide binding;nucleic acid binding; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G76940.1); Has 568 Blast hits to 568 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 270; Fungi - 126; Plants - 140; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative c406, Description = Putative uncharacterized protein c406, PFAM = PF00076)' T '35.1.42' 'not assigned.no ontology.proline rich family' 'niben101scf02400_60148-67048' '(at3g60320 : 592.0) Protein of unknown function (DUF630 and DUF632); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT1G02110.1); Has 6322 Blast hits to 3163 proteins in 311 species: Archae - 2; Bacteria - 139; Metazoa - 1165; Fungi - 535; Plants - 1058; Viruses - 107; Other Eukaryotes - 3316 (source: NCBI BLink). & (gnl|cdd|68357 : 345.0) no description available & (reliability: 1146.0) & (original description: Putative bZIP80, Description = BZIP transcription factor bZIP80, PFAM = PF04783;PF04782)' T '35.1.42' 'not assigned.no ontology.proline rich family' 'niben101scf03309_242119-248255' '(at4g18570 : 382.0) Tetratricopeptide repeat (TPR)-like superfamily protein; BEST Arabidopsis thaliana protein match is: Hydroxyproline-rich glycoprotein family protein (TAIR:AT3G25690.3); Has 41355 Blast hits to 22856 proteins in 1198 species: Archae - 106; Bacteria - 4898; Metazoa - 15706; Fungi - 4501; Plants - 9175; Viruses - 1532; Other Eukaryotes - 5437 (source: NCBI BLink). & (reliability: 764.0) & (original description: Putative CHUP1, Description = Protein CHUP1, chloroplastic, PFAM = )' T '35.1.42' 'not assigned.no ontology.proline rich family' 'niben101scf03969_106878-113478' '(at3g25690 : 305.0) actin binding protein required for normal chloroplast positioning; CHLOROPLAST UNUSUAL POSITIONING 1 (CHUP1); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G18570.1). & (reliability: 576.0) & (original description: Putative Sb07g002450, Description = Putative uncharacterized protein Sb07g002450, PFAM = )' T '35.1.42' 'not assigned.no ontology.proline rich family' 'niben101scf05118_1200306-1205379' '(at1g63830 : 288.0) PLAC8 family protein; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT5G41390.1). & (reliability: 576.0) & (original description: Putative Os03g0123600, Description = Os03g0123600 protein, PFAM = )' T '35.1.42' 'not assigned.no ontology.proline rich family' 'niben101scf05173_359791-366534' '(at3g60320 : 576.0) Protein of unknown function (DUF630 and DUF632); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT1G02110.1); Has 6322 Blast hits to 3163 proteins in 311 species: Archae - 2; Bacteria - 139; Metazoa - 1165; Fungi - 535; Plants - 1058; Viruses - 107; Other Eukaryotes - 3316 (source: NCBI BLink). & (gnl|cdd|68357 : 349.0) no description available & (reliability: 1118.0) & (original description: Putative bZIP80, Description = BZIP transcription factor bZIP80, PFAM = PF04782;PF04783)' T '35.1.42' 'not assigned.no ontology.proline rich family' 'niben101scf05543_218748-232569' '(gnl|cdd|39871 : 131.0) no description available & (at5g62640 : 125.0) nuclear targeted protein involved in flowering time regulation that affects flowering time independent of FLC; proline-rich family protein; CONTAINS InterPro DOMAIN/s: WW domain binding protein 11 (InterPro:IPR019007); Has 8610 Blast hits to 7436 proteins in 563 species: Archae - 8; Bacteria - 778; Metazoa - 3914; Fungi - 1570; Plants - 910; Viruses - 344; Other Eukaryotes - 1086 (source: NCBI BLink). & (gnl|cdd|87974 : 112.0) no description available & (reliability: 250.0) & (original description: Putative ELF5, Description = WW domain-binding protein, PFAM = PF09429;PF12622)' T '35.1.42' 'not assigned.no ontology.proline rich family' 'niben101scf07250_198965-207940' '(at3g51290 : 479.0) FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867), Ras (InterPro:IPR013753), Ras small GTPase, Ras type (InterPro:IPR003577), Small GTPase, Rho type (InterPro:IPR003578), Small GTP-binding protein (InterPro:IPR005225), Ras GTPase (InterPro:IPR001806), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT1G02110.1). & (gnl|cdd|68357 : 288.0) no description available & (reliability: 958.0) & (original description: Putative BnaC08g22690D, Description = BnaC08g22690D protein, PFAM = PF04783;PF04782)' T '35.1.42' 'not assigned.no ontology.proline rich family' 'niben101scf07576_83434-89058' '(at5g41390 : 295.0) PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT1G63830.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 576.0) & (original description: Putative Os03g0123600, Description = Os03g0123600 protein, PFAM = )' T '35.1.42' 'not assigned.no ontology.proline rich family' 'niben101scf07576_83455-89139' '(at5g41390 : 288.0) PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT1G63830.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 564.0) & (original description: Putative At1g63830, Description = PLAC8 family protein, PFAM = )' T '35.1.42' 'not assigned.no ontology.proline rich family' 'niben101scf08690_261781-264882' '(at1g64450 : 109.0) Glycine-rich protein family; BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT4G23930.1); Has 61689 Blast hits to 17372 proteins in 1170 species: Archae - 25; Bacteria - 6104; Metazoa - 45491; Fungi - 2077; Plants - 2819; Viruses - 1028; Other Eukaryotes - 4145 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative PGSC0003DMG400000115, Description = Late embryogenesis abundant hydroxyproline-rich glycoprotein, PFAM = )' T '35.1.42' 'not assigned.no ontology.proline rich family' 'niben101scf10556_35152-40409' '(at5g07020 : 156.0) proline-rich family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative At5g07020, Description = Proline-rich family protein, PFAM = )' T '35.1.42' 'not assigned.no ontology.proline rich family' 'niben101scf11782_321093-332639' '(at5g41390 : 301.0) PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT1G63830.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 600.0) & (original description: Putative Os03g0123600, Description = Os03g0123600 protein, PFAM = )' T '35.1.42' 'not assigned.no ontology.proline rich family' 'niben101scf12987_7228-12344' '(at5g07020 : 160.0) proline-rich family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative BnaA03g48230D, Description = BnaA03g48230D protein, PFAM = )' T '35.1.42' 'not assigned.no ontology.proline rich family' 'niben101scf15689_77990-85308' '(at5g41390 : 157.0) PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT1G63830.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative At1g63830, Description = PLAC8 family protein, PFAM = )' T '35.1.60' 'not assigned.no ontology.phloem proteins' '' '' '35.1.999' 'not assigned.no ontology.formerly annotated based on articles which have been retracted' '' '' '35.1.1001' 'not assigned.no ontology' '2-aminobutyrate' 'GABA analog' M '35.1.1002' 'not assigned.no ontology' '3-aminobutyrate' 'GABA analog' M '35.1.1003' 'not assigned.no ontology' 'digoxigenin' 'Used to label nucleic acids (analyte?)' M '35.1.1004' 'not assigned.no ontology' 'glucose-3-sulfate' 'KnownCompoundUnknownFunction' M '35.1.1005' 'not assigned.no ontology' '3-pyrroline' 'KnownCompoundUnknownFunction' M '35.1.1006' 'not assigned.no ontology' 'gluconate' 'KnownCompoundUnknownFunction (analyte?)' M '35.1.1007' 'not assigned.no ontology' 'isoascorbate' 'KnownCompoundUnknownFunction (analyte?)' M '35.1.1008' 'not assigned.no ontology' 'saccharate' 'KnownCompoundUnknownFunction' M '35.1.1009' 'not assigned.no ontology' 'hexachlorobenzene' 'pesticide, insecticide, also called lindane' M '35.1.1010' 'not assigned.no ontology' 'citramalate' 'KnownCompoundUnknownFunction' M '35.1.1011' 'not assigned.no ontology' 'maleate' 'KnownCompoundUnknownFunction' M '35.1.1012' 'not assigned.no ontology' 'hydroxylamine' 'KnownCompoundUnknownFunction' M '35.1.1013' 'not assigned.no ontology' 'n-acetyl-serine' 'KnownCompoundUnknownFunction' M '35.1.1014' 'not assigned.no ontology' 'homoglutamine' 'KnownCompoundUnknownFunction' M '35.1.1015' 'not assigned.no ontology' 'imidazole' 'KnownCompoundUnknownFunction (analyte?)' M '35.1.1016' 'not assigned.no ontology' 'norleucine' 'KnownCompoundUnknownFunction' M '35.1.1017' 'not assigned.no ontology' 'norvaline' 'KnownCompoundUnknownFunction' M '35.1.1018' 'not assigned.no ontology' 'suberyl glycine' 'KnownCompoundUnknownFunction' M '35.1.1019' 'not assigned.no ontology' 'parabanate' 'KnownCompoundUnknownFunction' M '35.1.1020' 'not assigned.no ontology' 'octadecanol' 'KnownCompoundUnknownFunction, C18OH' M '35.1.1021' 'not assigned.no ontology' 'hexacosanol' 'KnownCompoundUnknownFunction, (C26-OH)' M '35.1.1022' 'not assigned.no ontology' 'threonic acid-1,4-lactone' 'KnownCompoundUnknownFunction' M '35.1.1023' 'not assigned.no ontology' 'docosanol' 'KnownCompoundUnknownFunction' M '35.1.1024' 'not assigned.no ontology.Kojic acid' 'kojic acid' 'KnownCompoundUnknownFunction' M '35.1.1025' 'not assigned.no ontology.Hydroxyurea' 'hydroxyurea' 'KnownCompoundUnknownFunction' M '35.2' 'not assigned.unknown' 'nbv0.3scaffold5_76388-85843' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold74_133968-137360' ' (original description: Putative asr4, Description = ASR4 protein, PFAM = PF02496)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold109_9646-12235' ' no hits & (original description: Putative , Description = 5'-AMP-activated protein kinase beta-2 subunit protein, PFAM = PF04739)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold152_53016-61149' '(at1g75150 : 162.0) unknown protein; Has 38228 Blast hits to 24529 proteins in 1168 species: Archae - 169; Bacteria - 4103; Metazoa - 14594; Fungi - 5866; Plants - 1861; Viruses - 317; Other Eukaryotes - 11318 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative glysoja_022019, Description = , PFAM = PF09444)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold154_23151-30140' '(at2g39170 : 153.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function NEP (InterPro:IPR019320); Has 57 Blast hits to 57 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|39723 : 137.0) no description available & (reliability: 306.0) & (original description: Putative , Description = , PFAM = PF10167)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold201_126455-131080' '(at4g24200 : 147.0) Transcription elongation factor (TFIIS) family protein; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923); Has 1174 Blast hits to 562 proteins in 174 species: Archae - 0; Bacteria - 342; Metazoa - 163; Fungi - 176; Plants - 109; Viruses - 0; Other Eukaryotes - 384 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative At4g24200, Description = BnaC07g38790D protein, PFAM = PF08711)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold294_86728-88273' ' no hits & (original description: Putative orf175, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold325_14726-17141' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold337_115734-119325' ' no hits & (original description: Putative SPEAR1, Description = Protein SPEAR1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold340_133180-135581' ' no hits & (original description: Putative arg, Description = Putative arabinogalactan-protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold385_6475-12488' ' (original description: Putative serB, Description = Protein ApaG, PFAM = PF04379;PF02151;PF02151)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold387_100145-107624' '(at5g46220 : 514.0) Protein of unknown function (DUF616); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF616 (InterPro:IPR006852); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF616) (TAIR:AT4G38500.1); Has 226 Blast hits to 226 proteins in 19 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|68342 : 376.0) no description available & (reliability: 1028.0) & (original description: Putative At5g46220, Description = At5g46220, PFAM = PF04765)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold394_102554-105081' '(atmg00660 : 122.0) hypothetical protein; unknown protein. & (reliability: 244.0) & (original description: Putative orf176, Description = Orf176 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold394_115203-117556' ' no hits & (original description: Putative orf118, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold411_97671-100417' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold435_64059-67144' ' no hits & (original description: Putative PGSC0003DMG400043561, Description = , PFAM = PF03754)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold444_109395-113122' ' no hits & (original description: Putative , Description = , PFAM = PF00786)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold458_26976-37608' '(at1g17080 : 101.0) Ribosomal protein L18ae family; BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT1G53560.1); Has 119 Blast hits to 119 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 119; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative BnaA09g45170D, Description = BnaA09g45170D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold466_114658-117926' ' (original description: Putative STK, Description = Storekeeper protein, PFAM = PF04504)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold506_72344-79911' ' no hits & (original description: Putative , Description = Sterile alpha motif domain-containing protein isoform 1, PFAM = PF00536)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold530_45842-48435' ' no hits & (original description: Putative VQ22, Description = AtVQ22, PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold531_49204-57635' ' no hits & (original description: Putative PGSC0003DMG400030879, Description = Kinesin-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold535_57797-61447' '(gnl|cdd|68298 : 185.0) no description available & (at1g62420 : 130.0) Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT1G12030.1); Has 389 Blast hits to 387 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 387; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative , Description = , PFAM = PF04720)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold603_68657-81318' '(at5g19050 : 473.0) alpha/beta-Hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1749 (InterPro:IPR013744); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|40037 : 383.0) no description available & (gnl|cdd|71966 : 205.0) no description available & (reliability: 946.0) & (original description: Putative TCM_020506, Description = Alpha/beta-Hydrolases superfamily protein isoform 2, PFAM = PF08538)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold679_69982-101852' '(at5g23490 : 610.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08440.1); Has 202 Blast hits to 197 proteins in 48 species: Archae - 0; Bacteria - 13; Metazoa - 25; Fungi - 9; Plants - 109; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (reliability: 1220.0) & (original description: Putative Os05g0100900, Description = Os05g0100900 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold741_105118-113361' '(at5g42920 : 738.0) Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.; THO5; CONTAINS InterPro DOMAIN/s: THO complex, subunit 5 (InterPro:IPR019163); BEST Arabidopsis thaliana protein match is: THO complex, subunit 5 (TAIR:AT1G45233.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37427 : 252.0) no description available & (reliability: 1476.0) & (original description: Putative THO5B, Description = THO complex subunit 5B, PFAM = PF09766)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold793_98041-100415' ' no hits & (original description: Putative orf125g, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold978_73059-80924' '(at4g32330 : 157.0) TPX2 (targeting protein for Xklp2) protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT2G25480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative WDL6, Description = Protein WVD2-like 6, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1067_96232-98866' ' no hits & (original description: Putative F16B3.11, Description = AT3g02480/F16B3_11, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1092_1-45391' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Callose synthase 9, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1102_27387-30313' '(gnl|cdd|69434 : 363.0) no description available & (at2g04220 : 353.0) Plant protein of unknown function (DUF868); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT4G12690.2); Has 284 Blast hits to 282 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 284; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 706.0) & (original description: Putative BnaA07g04720D, Description = BnaA07g04720D protein, PFAM = PF05910)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1110_97411-100557' '(at1g68490 : 85.5) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1123_703-6189' '(gnl|cdd|69644 : 224.0) no description available & (at5g10150 : 204.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF966 (InterPro:IPR010369), Uncharacterised conserved protein UCP031043 (InterPro:IPR021182); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF966) (TAIR:AT5G59790.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative At2g28150, Description = Putative uncharacterized protein At2g28150, PFAM = PF06136;PF06136)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1128_1-1722' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1225_26810-33129' '(at2g23093 : 372.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G49310.1); Has 365 Blast hits to 362 proteins in 119 species: Archae - 0; Bacteria - 86; Metazoa - 79; Fungi - 33; Plants - 127; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|39533 : 91.2) no description available & (gnl|cdd|86904 : 83.1) no description available & (reliability: 744.0) & (original description: Putative BnaC08g34640D, Description = BnaC08g34640D protein, PFAM = PF05631)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1236_5601-8164' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1237_4523-14322' '(at5g14710 : 142.0) CONTAINS InterPro DOMAIN/s: Proteasome assembly chaperone 3 (InterPro:IPR018788); Has 120 Blast hits to 120 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 2; Plants - 49; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|40025 : 125.0) no description available & (reliability: 284.0) & (original description: Putative T9L3_10, Description = Proteasome assembly chaperone 3-domain protein, PFAM = PF10178)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1241_89106-91723' ' (original description: Putative erf, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1254_53727-58468' ' no hits & (original description: Putative ATHP, Description = AtTrxx, PFAM = PF00085)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1305_52699-55636' ' (original description: Putative nsLTP, Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1329_87313-89711' ' no hits & (original description: Putative glysoja_041323, Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1347_79619-81840' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1352_36387-40458' '(at5g18250 : 121.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative At3g04040, Description = AT3G04040 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1352_40543-97655' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1365_57403-63750' ' no hits & (original description: Putative , Description = , PFAM = PF14383)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1370_85599-87985' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1375_8339-12256' '(at5g23340 : 94.0) RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT4G15475.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37158 : 81.7) no description available & (reliability: 188.0) & (original description: Putative , Description = , PFAM = PF13516;PF13516;PF13516)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1395_18568-25794' '(at2g43320 : 476.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: Putative methyltransferase family protein (TAIR:AT4G14000.1); Has 304 Blast hits to 295 proteins in 127 species: Archae - 0; Bacteria - 2; Metazoa - 118; Fungi - 41; Plants - 98; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|38131 : 115.0) no description available & (reliability: 952.0) & (original description: Putative At2g43320, Description = At2g43320/T1O24.6, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1454_405-2782' ' no hits & (original description: Putative HLH1, Description = AtbHLH165, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1469_88543-92091' ' no hits & (original description: Putative F383_04392, Description = DNA-directed RNA polymerase subunit beta, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1480_21178-23731' ' no hits & (original description: Putative s31, Description = 30S ribosomal protein S31, chloroplastic, PFAM = PF17067)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1545_12503-20027' ' no hits & (original description: Putative At2g06320, Description = Pol polyprotein, PFAM = PF00665)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1563_24976-31332' '(at1g15370 : 259.0) SNARE-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longin-like (InterPro:IPR011012); Has 91 Blast hits to 91 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 12; Plants - 67; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 518.0) & (original description: Putative pco095958, Description = Longin-like domain-containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1563_46720-51272' '(at1g52590 : 135.0) Putative thiol-disulphide oxidoreductase DCC; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Putative thiol-disulphide oxidoreductase DCC (InterPro:IPR007263); BEST Arabidopsis thaliana protein match is: Putative thiol-disulphide oxidoreductase DCC (TAIR:AT1G24095.1); Has 955 Blast hits to 955 proteins in 365 species: Archae - 5; Bacteria - 640; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 232 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative At1g52590, Description = DCC family protein At1g52590, chloroplastic, PFAM = PF04134)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1574_62366-93969' '(at4g10930 : 519.0) unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1038.0) & (original description: Putative At4g10940, Description = RING/U-box protein, PFAM = PF00628;PF13639;PF15870)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1577_50678-55318' '(at2g41200 : 116.0) unknown protein; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative MTR_7g089940, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1609_37108-88196' '(at2g30695 : 123.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative At2g30695, Description = At2g30700/T11J7.9, PFAM = PF05697)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1610_65778-69364' '(at2g23370 : 337.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34090.1); Has 73 Blast hits to 73 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 674.0) & (original description: Putative TCM_000661, Description = Uncharacterized protein isoform 4, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1639_21217-24206' ' no hits & (original description: Putative Dif54, Description = BnaA07g31240D protein, PFAM = PF04554;PF04554;PF04554;PF04554)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1835_34938-38223' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold1925_85778-88585' '(at3g62630 : 216.0) Protein of unknown function (DUF1645); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT2G15760.1); Has 309 Blast hits to 289 proteins in 68 species: Archae - 3; Bacteria - 16; Metazoa - 56; Fungi - 10; Plants - 169; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative PGSC0003DMG400045409, Description = , PFAM = PF07816)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2021_21804-25258' ' no hits & (original description: Putative PGSC0003DMG400040835, Description = Basix helix-loop-helix family protein, PFAM = PF00010)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2105_64161-72779' '(at4g34260 : 1058.0) FUC95A; FUNCTIONS IN: 1,2-alpha-L-fucosidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase-like (InterPro:IPR008928), Uncharacterised conserved protein UCP007663 (InterPro:IPR016518); Has 1349 Blast hits to 1316 proteins in 300 species: Archae - 2; Bacteria - 1123; Metazoa - 0; Fungi - 116; Plants - 52; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 2116.0) & (original description: Putative FUC95A, Description = Alpha-L-fucosidase 2, PFAM = PF14498)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2127_82981-85322' ' no hits & (original description: Putative , Description = , PFAM = PF12023)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2136_32065-35244' '(at2g17940 : 83.6) Plant protein of unknown function (DUF827); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT3G51220.1); Has 80 Blast hits to 72 proteins in 20 species: Archae - 0; Bacteria - 6; Metazoa - 12; Fungi - 6; Plants - 48; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative BnaA07g02400D, Description = BnaA07g02400D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2143_13750-16643' ' (original description: Putative PGSC0003DMG400021845, Description = , PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2148_69381-75911' '(at5g10060 : 393.0) ENTH/VHS family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT5G65180.1); Has 5399 Blast hits to 5001 proteins in 612 species: Archae - 19; Bacteria - 730; Metazoa - 2186; Fungi - 823; Plants - 382; Viruses - 37; Other Eukaryotes - 1222 (source: NCBI BLink). & (gnl|cdd|37880 : 233.0) no description available & (gnl|cdd|47880 : 112.0) no description available & (reliability: 786.0) & (original description: Putative BnaA02g00330D, Description = BnaA02g00330D protein, PFAM = PF04818)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2207_4003-6443' ' no hits & (original description: Putative At5g11850, Description = Armadillo repeat-containing protein 3 and Serine/threonine-protein kinase CTR1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2220_59239-62186' '(at2g44600 : 152.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G60200.1); Has 56 Blast hits to 55 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative At2g44600, Description = At2g44600/F16B22.9, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2225_78600-84802' '(at3g32940 : 155.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087); BEST Arabidopsis thaliana protein match is: splicing factor-related (TAIR:AT5G51300.3); Has 1765 Blast hits to 1598 proteins in 251 species: Archae - 0; Bacteria - 25; Metazoa - 867; Fungi - 350; Plants - 198; Viruses - 11; Other Eukaryotes - 314 (source: NCBI BLink). & (gnl|cdd|35341 : 82.4) no description available & (reliability: 310.0) & (original description: Putative PGSC0003DMG400032140, Description = BnaA06g30610D protein, PFAM = PF16275)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2242_1-2260' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2309_56494-69301' '(at5g15900 : 466.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 19 (TBL19); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 21 (TAIR:AT5G15890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|72785 : 129.0) no description available & (reliability: 932.0) & (original description: Putative TBL19, Description = Protein trichome birefringence-like 19, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2320_65873-69021' ' (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2326_12807-17786' '(at2g28150 : 255.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF966 (InterPro:IPR010369), Uncharacterised conserved protein UCP031043 (InterPro:IPR021182); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF966) (TAIR:AT5G59790.1); Has 2510 Blast hits to 686 proteins in 184 species: Archae - 0; Bacteria - 433; Metazoa - 315; Fungi - 216; Plants - 186; Viruses - 4; Other Eukaryotes - 1356 (source: NCBI BLink). & (gnl|cdd|69644 : 244.0) no description available & (reliability: 510.0) & (original description: Putative At2g28150, Description = Putative uncharacterized protein At2g28150, PFAM = PF06136;PF06136)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2326_81060-83793' '(at1g70505 : 140.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10660.1); Has 141 Blast hits to 140 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 135; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative BnaA04g01000D, Description = BnaA04g01000D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2333_13388-15929' ' no hits & (original description: Putative , Description = , PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2341_2478-4810' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2380_65492-68620' ' no hits & (original description: Putative , Description = , PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2507_3916-10683' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2517_57790-71774' '(at4g32570 : 92.0) TIFY domain protein 8 (TIFY8); CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative Ccrd_007664, Description = Tify, PFAM = PF06200)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2651_73466-77952' ' no hits & (original description: Putative PGSC0003DMG400004801, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2684_74849-78568' '(at1g12330 : 446.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12900.1); Has 249 Blast hits to 249 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 14; Plants - 217; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 892.0) & (original description: Putative At1g12330, Description = F5O11.6, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2710_69234-75922' '(at5g47090 : 251.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2052, coiled-coil (InterPro:IPR018613); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38254 : 143.0) no description available & (reliability: 502.0) & (original description: Putative At5g47090, Description = AT5g47090/K14A3_4, PFAM = PF09747)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2716_57761-80202' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2722_28016-34081' ' no hits & (original description: Putative dl3935w, Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2723_34231-39714' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2727_45495-48271' '(at5g11890 : 121.0) FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G17620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative BnaA10g20710D, Description = BnaA10g20710D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2750_27475-34320' '(at1g56420 : 148.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12530.1); Has 58 Blast hits to 58 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative BnaC05g39620D, Description = BnaC05g39620D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2831_49960-55189' '(at2g39910 : 377.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF2454 (InterPro:IPR018870); Has 85 Blast hits to 84 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 754.0) & (original description: Putative Sb10g028350, Description = Putative uncharacterized protein Sb10g028350, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2847_35093-37707' ' no hits & (original description: Putative , Description = , PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2914_45988-56840' '(at5g25360 : 158.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1). & (reliability: 316.0) & (original description: Putative At3g15770, Description = AT3G15770 protein, PFAM = PF13259;PF13259)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold2976_10819-13286' ' no hits & (original description: Putative HM01045, Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold3011_29451-38466' '(at1g64570 : 461.0) DUO POLLEN 3 (DUO3); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057); Has 1836 Blast hits to 1575 proteins in 289 species: Archae - 4; Bacteria - 248; Metazoa - 589; Fungi - 287; Plants - 112; Viruses - 46; Other Eukaryotes - 550 (source: NCBI BLink). & (reliability: 922.0) & (original description: Putative glysoja_010019, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold3057_14082-22823' '(at3g56720 : 83.6) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages. & (reliability: 167.2) & (original description: Putative At3g56720, Description = AT3G56720 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold3080_50012-52365' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold3106_52344-59842' '(at1g76620 : 333.0) Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT1G21060.1); Has 866 Blast hits to 747 proteins in 129 species: Archae - 0; Bacteria - 108; Metazoa - 79; Fungi - 87; Plants - 458; Viruses - 1; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|68359 : 177.0) no description available & (reliability: 666.0) & (original description: Putative At1g21060, Description = BnaA04g13840D protein, PFAM = PF14389;PF04784)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold3158_39502-49661' '(at2g35900 : 150.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; Has 32 Blast hits to 32 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative At2g35900, Description = Putative uncharacterized protein At2g35900, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold3158_52785-58288' '(at5g06440 : 363.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT3G11720.3). & (reliability: 726.0) & (original description: Putative TCM_023090, Description = Mitotic checkpoint serine/threonine-protein kinase BUB1, putative isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold3170_9766-12363' ' no hits & (original description: Putative , Description = Putative membrane-associated kinase regulator 1-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold3195_58957-62543' ' no hits & (original description: Putative PGSC0003DMG400029285, Description = Heterotrimeric G-protein gamma subunit 2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold3288_43886-69131' '(at3g24255 : 130.0) RNA-directed DNA polymerase (reverse transcriptase)-related family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23910.1); Has 169 Blast hits to 169 proteins in 55 species: Archae - 8; Bacteria - 18; Metazoa - 36; Fungi - 11; Plants - 53; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative PGSC0003DMG400012595, Description = Putative ovule protein, PFAM = PF13966)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold3316_1-6975' '(at3g54970 : 316.0) D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29567 : 103.0) no description available & (reliability: 632.0) & (original description: Putative At3g54970, Description = D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein, PFAM = PF01063)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold3367_18759-22804' '(at2g33570 : 663.0) Domain of unknown function (DUF23); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF23) (TAIR:AT5G44670.1); Has 195 Blast hits to 195 proteins in 24 species: Archae - 2; Bacteria - 7; Metazoa - 43; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|85620 : 103.0) no description available & (gnl|cdd|39932 : 87.1) no description available & (reliability: 1326.0) & (original description: Putative GALS1, Description = Galactan beta-1,4-galactosyltransferase GALS1, PFAM = PF01697)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold3395_46236-48541' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold3452_55367-65682' ' no hits & (original description: Putative BnaC09g44970D, Description = BnaC09g44970D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold3466_49020-57398' '(at4g32750 : 369.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 738.0) & (original description: Putative BnaC03g66930D, Description = BnaC03g66930D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold3534_2963-20765' ' no hits & (original description: Putative FGENESH1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold3676_30622-34462' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold3718_1-6640' '(at5g27390 : 251.0) Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124); Has 23 Blast hits to 23 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 502.0) & (original description: Putative PPD8, Description = Photosystem II reaction center PsbP family protein, PFAM = PF01789)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold3735_70569-72931' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold3780_62615-65235' ' no hits & (original description: Putative , Description = DNA/RNA polymerases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold3786_62109-64794' '(at4g31830 : 116.0) unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative BnaA01g05030D, Description = BnaA01g05030D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold3832_903-3997' ' no hits & (original description: Putative CDKI1, Description = Cyclin-dependent kinase inhibitor 7, PFAM = PF02234)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold3898_16958-19475' '(at4g33100 : 108.0) CONTAINS InterPro DOMAIN/s: Mitochondrial distribution/morphology family 35/apoptosis (InterPro:IPR007918); Has 214 Blast hits to 214 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 69; Plants - 29; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative At4g33100, Description = Uncharacterized protein At4g33100, PFAM = PF05254)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold3944_9730-12601' '(at1g16320 : 281.0) Uncharacterized conserved protein (DUF2358); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); BEST Arabidopsis thaliana protein match is: Uncharacterized conserved protein (DUF2358) (TAIR:AT1G79510.2); Has 274 Blast hits to 274 proteins in 79 species: Archae - 0; Bacteria - 78; Metazoa - 80; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 562.0) & (original description: Putative , Description = Wollemia nobilis Ref_Wollemi_Transcript_28887_1569 transcribed RNA sequence, PFAM = PF10184)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold3993_1618-4280' ' no hits & (original description: Putative , Description = , PFAM = PF03732)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold4014_69429-71124' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold4065_35627-39989' '(at5g01360 : 568.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 3 (TBL3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT3G55990.1); Has 1290 Blast hits to 1278 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 2; Plants - 1285; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 183.0) no description available & (reliability: 1136.0) & (original description: Putative TBL3, Description = Protein trichome birefringence-like 3, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold4186_2648-5376' ' no hits & (original description: Putative , Description = , PFAM = PF13912)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold4190_3610-11875' '(at3g04650 : 566.0) FAD/NAD(P)-binding oxidoreductase family protein; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT1G56000.1); Has 902 Blast hits to 899 proteins in 231 species: Archae - 14; Bacteria - 382; Metazoa - 7; Fungi - 2; Plants - 133; Viruses - 0; Other Eukaryotes - 364 (source: NCBI BLink). & (gnl|cdd|33187 : 171.0) no description available & (reliability: 1132.0) & (original description: Putative Os12g0597400, Description = Expressed protein, PFAM = PF13450)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold4190_32971-35078' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold4202_53199-70040' ' no hits & (original description: Putative , Description = , PFAM = PF03080)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold4246_14164-18798' '(at1g65230 : 336.0) Uncharacterized conserved protein (DUF2358); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); Has 45 Blast hits to 45 proteins in 18 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 672.0) & (original description: Putative At1g65230, Description = Putative uncharacterized protein At1g65230, PFAM = PF10184)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold4278_30497-35413' '(at3g63430 : 189.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74160.1); Has 135 Blast hits to 119 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 3; Plants - 119; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative PGSC0003DMG400022986, Description = At3g63430, PFAM = PF14309;PF14383)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold4282_34323-36860' ' no hits & (original description: Putative PGSC0003DMG400028755, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold4293_63460-69526' ' (original description: Putative BnaC07g06040D, Description = Translation initiation factor IF-3, PFAM = PF05198;PF00707)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold4348_53386-69173' '(at1g55325 : 1270.0) Encodes the Arabidopsis homolog of the transcriptional regulator MED13, is dynamically expressed during embryogenesis and regulates both developmental timing and the radial pattern formation.; GRAND CENTRAL (GCT); FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of development, heterochronic, regulation of radial pattern formation; LOCATED IN: mediator complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med13 (InterPro:IPR009401). & (gnl|cdd|69831 : 92.9) no description available & (gnl|cdd|38806 : 82.8) no description available & (reliability: 2540.0) & (original description: Putative Os05g0447500, Description = Os05g0447500 protein, PFAM = PF06333)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold4405_43672-63129' '(at3g06670 : 978.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF625 (InterPro:IPR006887); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49390.1). & (gnl|cdd|37386 : 368.0) no description available & (gnl|cdd|86726 : 252.0) no description available & (reliability: 1956.0) & (original description: Putative LOC100502168, Description = SMEK-like protein 1, PFAM = PF04802)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold4442_17997-21781' ' no hits & (original description: Putative RIC4, Description = CRIB domain-containing protein RIC4, PFAM = PF00786)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold4442_23191-30147' '(at5g36290 : 318.0) Uncharacterized protein family (UPF0016); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0016 (InterPro:IPR001727); BEST Arabidopsis thaliana protein match is: Uncharacterized protein family (UPF0016) (TAIR:AT1G25520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38092 : 261.0) no description available & (gnl|cdd|32302 : 134.0) no description available & (reliability: 636.0) & (original description: Putative tparl, Description = Transmembrane protein 165, PFAM = PF01169;PF01169)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold4454_54108-56917' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold4458_1-2152' '(gnl|cdd|69434 : 300.0) no description available & (at2g04220 : 276.0) Plant protein of unknown function (DUF868); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT4G12690.2); Has 284 Blast hits to 282 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 284; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 552.0) & (original description: Putative At4g12690, Description = At4g12690, PFAM = PF05910)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold4517_28001-31379' '(at5g10310 : 88.6) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative EPFL1, Description = EPF-like protein 1, PFAM = PF17181)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold4742_91903-100515' ' no hits & (original description: Putative WDL7, Description = TPX2 (Targeting protein for Xklp2) family protein, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold4858_45672-51334' '(at2g40316 : 170.0) FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 27 (InterPro:IPR018939); Has 135 Blast hits to 135 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi - 63; Plants - 31; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative At2g40316, Description = BnaA05g05440D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold4865_1004-3354' ' no hits & (original description: Putative PGSC0003DMG400016410, Description = , PFAM = PF14372)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold4904_27366-29704' ' no hits & (original description: Putative PGSC0003DMG400022174, Description = UPA24, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold4931_58222-61689' ' no hits & (original description: Putative PGSC0003DMG400027047, Description = CASP-like protein, PFAM = PF04535)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold5003_36483-41826' '(at3g11150 : 183.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 428 Blast hits to 428 proteins in 59 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 428; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|35365 : 95.9) no description available & (reliability: 366.0) & (original description: Putative F383_07507, Description = Gibberellin 2-beta-dioxygenase 1-like protein, PFAM = PF14226)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold5040_61633-65500' '(at5g25540 : 91.3) Expressed protein contains PAM2 PABC interacting domain.; CTC-interacting domain 6 (CID6); CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 5 (TAIR:AT5G11440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold5059_16433-18958' ' no hits & (original description: Putative , Description = Gag-protease-integrase-RT-RNaseH polyprotein, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold5180_42002-44205' ' no hits & (original description: Putative PGSC0003DMG400014690, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold5206_34231-43189' '(at4g22860 : 103.0) Cell cycle regulated microtubule associated protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Cell cycle regulated microtubule associated protein (InterPro:IPR022021); BEST Arabidopsis thaliana protein match is: Cell cycle regulated microtubule associated protein (TAIR:AT4G11990.1); Has 104 Blast hits to 96 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 3; Plants - 81; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative PGSC0003DMG400031013, Description = , PFAM = PF12214)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold5260_1248-4036' ' no hits & (original description: Putative melbel1, Description = POX family protein, putative isoform 1, PFAM = PF07526)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold5264_58574-61117' ' (original description: Putative PGSC0003DMG400001086, Description = , PFAM = PF04078)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold5302_29302-35095' '(at5g11780 : 181.0) unknown protein; Has 37 Blast hits to 37 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold5339_13597-28756' ' (original description: Putative pr10, Description = Pathogenesis-related protein 10, PFAM = PF00407)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold5339_34478-54265' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold5358_2592-6322' '(at1g03900 : 317.0) member of NAP family, an heterogeneous subfamily of the ATP-binding Cassette (ABC) superfamily of membrane transporters. The NAPs proteins are characterized by having only one nucleotide-binding folds (NBFs) domain.; non-intrinsic ABC protein 4 (NAP4); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: extracellular transport; LOCATED IN: membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Adaptin ear-binding coat-associated protein 1 NECAP-1 (InterPro:IPR012466); BEST Arabidopsis thaliana protein match is: Adaptin ear-binding coat-associated protein 1 NECAP-1 (TAIR:AT3G58600.1); Has 448 Blast hits to 448 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 218; Fungi - 61; Plants - 115; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|37711 : 264.0) no description available & (gnl|cdd|87402 : 227.0) no description available & (reliability: 634.0) & (original description: Putative At1g03900, Description = Uncharacterized protein At1g03900, PFAM = PF07933)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold5386_19485-24723' '(at1g15060 : 412.0) Uncharacterised conserved protein UCP031088, alpha/beta hydrolase; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase, At1g15070 (InterPro:IPR016969), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase (TAIR:AT1G73750.1); Has 177 Blast hits to 156 proteins in 44 species: Archae - 2; Bacteria - 72; Metazoa - 2; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 824.0) & (original description: Putative PGSC0003DMG400026880, Description = Alpha/beta fold hydrolase, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold5386_68414-74208' '(at3g07150 : 151.0) unknown protein; Has 19 Blast hits to 19 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative F383_24579, Description = Amino acid--[acyl-carrier-protein] ligase, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold5456_22566-25954' '(at1g02870 : 239.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosome biogenesis protein Nop16 (InterPro:IPR019002); Has 104 Blast hits to 104 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 63; Plants - 35; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|39968 : 146.0) no description available & (gnl|cdd|87965 : 107.0) no description available & (reliability: 478.0) & (original description: Putative At1g02870, Description = At1g02870, PFAM = PF09420)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold5458_2687-9424' '(at1g53400 : 174.0) Ubiquitin domain-containing protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Ubiquitin domain-containing protein (TAIR:AT5G45740.1); Has 319 Blast hits to 318 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 63; Plants - 89; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|35237 : 118.0) no description available & (reliability: 348.0) & (original description: Putative ubtd2, Description = Ubiquitin domain-containing protein 2, PFAM = PF16455)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold5502_18831-25529' '(at3g07210 : 501.0) unknown protein; Has 97 Blast hits to 85 proteins in 31 species: Archae - 0; Bacteria - 14; Metazoa - 7; Fungi - 19; Plants - 37; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 1002.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold5532_14882-17701' ' no hits & (original description: Putative At5g65660, Description = Uncharacterized protein At5g65660, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold5540_3750-7451' '(at4g30200 : 313.0) Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.; vernalization5/VIN3-like (VEL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vegetative to reproductive phase transition of meristem; LOCATED IN: PcG protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423, plant (InterPro:IPR004082), Fibronectin, type III-like fold (InterPro:IPR008957), Fibronectin, type III (InterPro:IPR003961); BEST Arabidopsis thaliana protein match is: Fibronectin type III domain-containing protein (TAIR:AT5G57380.1). & (reliability: 626.0) & (original description: Putative VEL1, Description = BnaC03g12980D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold5648_10932-21013' '(at5g49820 : 573.0) EMBRYO DEFECTIVE 1879 (EMB1879); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT2G31190.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68458 : 343.0) no description available & (gnl|cdd|39450 : 317.0) no description available & (reliability: 1146.0) & (original description: Putative , Description = , PFAM = PF04884)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold5652_58345-62027' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold5667_2817-5146' '(at3g22540 : 143.0) Protein of unknown function (DUF1677); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1677, plant (InterPro:IPR012876); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1677) (TAIR:AT4G14819.1); Has 245 Blast hits to 245 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 245; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|71349 : 126.0) no description available & (reliability: 286.0) & (original description: Putative , Description = , PFAM = PF07911)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold5697_2652-6454' '(gnl|cdd|68893 : 186.0) no description available & (at2g38070 : 139.0) Protein of unknown function (DUF740); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF740) (TAIR:AT3G09070.1); Has 108 Blast hits to 106 proteins in 27 species: Archae - 0; Bacteria - 3; Metazoa - 6; Fungi - 2; Plants - 76; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative , Description = , PFAM = PF05340)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold5701_1-5407' '(at5g43210 : 144.0) Excinuclease ABC, C subunit, N-terminal; FUNCTIONS IN: nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Excinuclease ABC, C subunit, N-terminal (InterPro:IPR000305); BEST Arabidopsis thaliana protein match is: Excinuclease ABC, C subunit, N-terminal (TAIR:AT2G30350.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative glysoja_006168, Description = Putative structure-specific endonuclease subunit SLX1-like, PFAM = PF01541)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold5712_15582-19946' ' no hits & (original description: Putative pAFD103, Description = PAFD103 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold5919_14929-23090' '(at1g28530 : 544.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; Has 20 Blast hits to 20 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1088.0) & (original description: Putative At1g28530, Description = Putative uncharacterized protein At1g28530, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold5959_1638-3936' ' no hits & (original description: Putative BnaCnng15000D, Description = BnaCnng15000D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold6095_15561-18097' ' no hits & (original description: Putative , Description = , PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold6121_21430-27024' '(at5g48240 : 207.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 286 Blast hits to 283 proteins in 145 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 97; Plants - 41; Viruses - 1; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative BnaC07g26310D, Description = BnaC07g26310D protein, PFAM = PF07890)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold6213_10643-16902' ' (original description: Putative rgga, Description = Hyaluronan/mRNA-binding protein, PFAM = PF09598;PF04774)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold6260_4155-19799' '(at2g25950 : 350.0) CONTAINS InterPro DOMAIN/s: Proteasome-interacting thioredoxin-like domain, C-terminal (InterPro:IPR010400); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1000) (TAIR:AT3G04780.1); Has 551 Blast hits to 551 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 233; Fungi - 139; Plants - 82; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|36941 : 233.0) no description available & (gnl|cdd|87041 : 148.0) no description available & (reliability: 700.0) & (original description: Putative PITHD1, Description = Putative cyclin-like protein, PFAM = PF06201)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold6345_15548-19691' ' (original description: Putative RpP2, Description = Ribosomal protein P2, PFAM = PF00428)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold6374_50351-55442' ' no hits & (original description: Putative PGSC0003DMG400012775, Description = Peptidyl-prolyl cis-trans isomerase, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold6389_13083-15605' '(at4g20190 : 94.7) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44660.1); Has 271 Blast hits to 209 proteins in 52 species: Archae - 0; Bacteria - 15; Metazoa - 63; Fungi - 14; Plants - 48; Viruses - 3; Other Eukaryotes - 128 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold6389_15606-24740' '(at5g44650 : 224.0) Encodes a chloroplast protein that induces tolerance to multiple environmental stresses and reduces photooxidative damage.; CHLOROPLAST PROTEIN-ENHANCING STRESS TOLERANCE (CEST); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, chloroplast organization, hyperosmotic salinity response, response to photooxidative stress, heat acclimation; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative CEST, Description = OsCEST, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold6407_49751-52425' ' no hits & (original description: Putative At2g42760, Description = At2g42760, PFAM = PF07939)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold6411_5949-8608' '(at5g05250 : 139.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold6427_27975-30349' '(gnl|cdd|70386 : 125.0) no description available & (at2g21740 : 112.0) Protein of unknown function (DUF1278); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, egg cell; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1278 (InterPro:IPR010701); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1278) (TAIR:AT2G21750.1); Has 82 Blast hits to 82 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative EC1, Description = Egg cell-secreted protein 1.2, PFAM = PF05617)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold6450_21997-24597' ' no hits & (original description: Putative PGSC0003DMG400021719, Description = Transcription factor DYSFUNCTIONAL TAPETUM 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold6458_12630-22236' '(at5g11280 : 263.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative At5g11280, Description = Putative uncharacterized protein At5g11280, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold6557_12303-15000' '(at3g09050 : 234.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 120 Blast hits to 120 proteins in 47 species: Archae - 4; Bacteria - 10; Metazoa - 33; Fungi - 2; Plants - 44; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative Sb03g040140, Description = Putative uncharacterized protein Sb03g040140, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold6571_29993-32328' '(at3g09085 : 156.0) Protein of unknown function (DUF962); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF962 (InterPro:IPR009305); Has 704 Blast hits to 704 proteins in 265 species: Archae - 0; Bacteria - 429; Metazoa - 0; Fungi - 2; Plants - 37; Viruses - 0; Other Eukaryotes - 236 (source: NCBI BLink). & (gnl|cdd|34045 : 81.9) no description available & (reliability: 312.0) & (original description: Putative At3g09085, Description = At3g09085, PFAM = PF06127)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold6600_37171-44630' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold6622_32427-37649' ' no hits & (original description: Putative PGSC0003DMG400022439, Description = Tetratricopeptide repeat-like superfamily protein, putative isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold6693_56445-58785' ' no hits & (original description: Putative Tgt1ORF2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold6731_32900-40339' '(at5g60370 : 327.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Defects-in-morphology protein 1-like, mitochondrial (InterPro:IPR019190); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39957 : 159.0) no description available & (reliability: 654.0) & (original description: Putative At5g60370, Description = Exonuclease V, chloroplastic, PFAM = PF09810;PF09810;PF09810)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold6731_32902-36000' '(at5g60370 : 112.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Defects-in-morphology protein 1-like, mitochondrial (InterPro:IPR019190); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39957 : 93.2) no description available & (reliability: 224.0) & (original description: Putative At5g60370, Description = BnaA02g06410D protein, PFAM = PF09810)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold6770_52743-55195' ' (original description: Putative Tgt1ORF2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold6780_34869-56763' '(at5g01010 : 629.0) EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038). & (reliability: 1258.0) & (original description: Putative BnaAnng00010D, Description = BnaAnng00010D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold6797_32383-52967' '(at1g36050 : 621.0) Endoplasmic reticulum vesicle transporter protein; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1692 (InterPro:IPR012936); BEST Arabidopsis thaliana protein match is: Endoplasmic reticulum vesicle transporter protein (TAIR:AT1G22200.1); Has 1261 Blast hits to 1092 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 439; Fungi - 275; Plants - 277; Viruses - 0; Other Eukaryotes - 270 (source: NCBI BLink). & (gnl|cdd|37878 : 426.0) no description available & (gnl|cdd|87414 : 250.0) no description available & (reliability: 1242.0) & (original description: Putative ergic3, Description = Endoplasmic reticulum-Golgi intermediate compartment protein 3, PFAM = PF07970;PF13850)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold7015_51071-56909' '(at5g48385 : 580.0) FRIGIDA-like protein; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT4G14900.1); Has 1269 Blast hits to 1187 proteins in 101 species: Archae - 0; Bacteria - 22; Metazoa - 72; Fungi - 9; Plants - 1133; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|71337 : 331.0) no description available & (reliability: 1160.0) & (original description: Putative FRL3, Description = FRIGIDA-like protein 3, PFAM = PF07899)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold7033_16919-25247' ' no hits & (original description: Putative Os02g0823600, Description = Os02g0823600 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold7035_36212-38718' '(at4g21970 : 120.0) Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT4G04630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68105 : 115.0) no description available & (reliability: 240.0) & (original description: Putative At1g11700, Description = At1g11700, PFAM = PF04520)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold7088_5707-8757' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold7290_23222-26933' '(at3g26350 : 174.0) LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13050.1); Has 3534 Blast hits to 2704 proteins in 342 species: Archae - 6; Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162; Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink). & (gnl|cdd|70773 : 104.0) no description available & (reliability: 348.0) & (original description: Putative BnaC02g36050D, Description = BnaC02g36050D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold7431_14023-17286' ' no hits & (original description: Putative , Description = , PFAM = PF09425;PF06200)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold7495_42719-45075' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold7497_5064-13910' '(at5g10710 : 399.0) INVOLVED IN: chromosome segregation, cell division; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Centromere protein Cenp-O (InterPro:IPR018464). & (reliability: 798.0) & (original description: Putative BnaC03g04500D, Description = BnaC03g04500D protein, PFAM = PF09496)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold7499_62775-80392' ' no hits & (original description: Putative PGSC0003DMG402010654, Description = SAGA-associated factor 11, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold7567_2232-4636' ' no hits & (original description: Putative , Description = , PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold7603_15157-41625' ' no hits & (original description: Putative PGSC0003DMG400007384, Description = EG45-like domain containing protein, PFAM = PF03330)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold7603_42801-46180' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold7617_737-7870' '(at2g02570 : 307.0) nucleic acid binding;RNA binding; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tudor subgroup (InterPro:IPR018351), Tudor domain (InterPro:IPR002999), Survival motor neuron (InterPro:IPR010304); Has 339 Blast hits to 339 proteins in 158 species: Archae - 0; Bacteria - 5; Metazoa - 136; Fungi - 89; Plants - 55; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|38236 : 162.0) no description available & (reliability: 614.0) & (original description: Putative Os08g0109900, Description = Os08g0109900 protein, PFAM = PF06003)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold7634_12640-16324' '(gnl|cdd|69095 : 201.0) no description available & (at1g61260 : 126.0) Protein of unknown function (DUF761); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF761) (TAIR:AT1G11220.1); Has 110 Blast hits to 108 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 108; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative CFE1, Description = Cotton fiber expressed protein 1, PFAM = PF14364;PF05553)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold7743_52179-54526' '(at3g57785 : 136.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42310.1); Has 121 Blast hits to 121 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 48; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative At3g57785, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold7879_48232-54848' '(at1g64960 : 843.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-type fold (InterPro:IPR016024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37160 : 538.0) no description available & (reliability: 1686.0) & (original description: Putative NCAPG2, Description = Condensin-2 complex subunit G2, PFAM = PF12422)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold7927_47317-50865' ' no hits & (original description: Putative Os05g0517800, Description = Os05g0517800 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold7962_15165-18214' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold7967_44145-46588' ' (original description: Putative corC, Description = Lipid transfer protein, PFAM = PF14547)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8018_22473-42260' '(at1g47550 : 1427.0) Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.; exocyst complex component sec3A (SEC3A); INVOLVED IN: biological_process unknown; LOCATED IN: exocyst; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Exocyst complex, component Exoc1 (InterPro:IPR019160); BEST Arabidopsis thaliana protein match is: exocyst complex component sec3B (TAIR:AT1G47560.1). & (gnl|cdd|37359 : 954.0) no description available & (reliability: 2854.0) & (original description: Putative SEC3A, Description = Exocyst complex component SEC3A, PFAM = PF09763;PF09763;PF15277)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8042_18498-22389' '(at5g39530 : 199.0) Protein of unknown function (DUF1997); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1997 (InterPro:IPR018971); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1997) (TAIR:AT5G39520.1); Has 204 Blast hits to 204 proteins in 68 species: Archae - 0; Bacteria - 103; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|87911 : 105.0) no description available & (reliability: 398.0) & (original description: Putative , Description = , PFAM = PF09366)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8130_2715-7127' ' no hits & (original description: Putative PGSC0003DMG400009946, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8178_31528-49128' '(at2g01690 : 903.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), Protein of unknown function DUF3434 (InterPro:IPR021841), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35433 : 668.0) no description available & (reliability: 1806.0) & (original description: Putative VAC14, Description = Protein VAC14 homolog, PFAM = PF11916;PF12755)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8204_32346-41614' '(at1g33500 : 154.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative BnaA05g17850D, Description = BnaA05g17850D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8207_34019-36554' '(at1g70780 : 122.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 143 Blast hits to 143 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative BnaC08g06180D, Description = BnaC08g06180D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8234_36024-41459' ' no hits & (original description: Putative At1g80610, Description = At1g80610/T21F11_6, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8253_5611-10241' ' no hits & (original description: Putative PGSC0003DMG400030869, Description = Ribosomal protein S11, PFAM = PF00411)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8281_32711-35133' ' no hits & (original description: Putative , Description = , PFAM = PF04844)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8297_3804-7240' '(at5g58960 : 488.0) Mutant plants display impaired light-regulation of the hypocotyl randomization response.; GRAVITROPIC IN THE LIGHT (GIL1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF641) (TAIR:AT2G45260.1); Has 292 Blast hits to 290 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 282; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|68434 : 112.0) no description available & (reliability: 976.0) & (original description: Putative GIL1, Description = Os03g0825600 protein, PFAM = PF04859)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8317_32774-36551' ' (original description: Putative RT, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8342_30292-34687' '(at1g72490 : 164.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17400.1); Has 75 Blast hits to 75 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 4; Plants - 58; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative BnaC05g13550D, Description = BnaC05g13550D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8381_12638-19262' '(at2g33420 : 1233.0) CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT1G04470.1); Has 196 Blast hits to 182 proteins in 26 species: Archae - 0; Bacteria - 2; Metazoa - 13; Fungi - 0; Plants - 176; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|69201 : 418.0) no description available & (reliability: 2466.0) & (original description: Putative At1g04470, Description = F19P19.6 protein, PFAM = PF05664)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8436_34147-37213' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8438_8534-12810' '(at4g00770 : 85.9) unknown protein; Has 127 Blast hits to 120 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 8; Plants - 62; Viruses - 3; Other Eukaryotes - 46 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative TCM_005434, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8440_1931-4494' ' no hits & (original description: Putative , Description = , PFAM = PF05032)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8448_11044-16991' '(at5g24310 : 193.0) One of four ABI-like proteins. Involved in trichome morphogenesis, root elongation. Associates with microtubules.; ABL interactor-like protein 3 (ABIL3); BEST Arabidopsis thaliana protein match is: ABL interactor-like protein 2 (TAIR:AT3G49290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5jkn2|abil2_orysa : 134.0) Putative protein ABIL2 (Abl interactor-like protein 2) - Oryza sativa (Rice) & (reliability: 386.0) & (original description: Putative ABIL2, Description = Protein ABIL2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8456_46275-49216' '(gnl|cdd|71982 : 98.2) no description available & (at1g16810 : 91.7) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1754, eukaryotic (InterPro:IPR013865); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative Sb04g000960, Description = Putative uncharacterized protein Sb04g000960, PFAM = PF08555)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8473_22233-24683' ' no hits & (original description: Putative orf122, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8512_62828-76460' '(at2g42670 : 305.0) Protein of unknown function (DUF1637); FUNCTIONS IN: cysteamine dioxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1637 (InterPro:IPR012864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1637) (TAIR:AT3G58670.3); Has 366 Blast hits to 366 proteins in 96 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|71286 : 274.0) no description available & (gnl|cdd|39482 : 271.0) no description available & (reliability: 610.0) & (original description: Putative PCO4, Description = Plant cysteine oxidase 4, PFAM = PF07847)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8525_41840-44208' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8531_41418-45368' '(at5g64230 : 256.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 512.0) & (original description: Putative MTR_2g008960, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8594_48640-50804' ' no hits & (original description: Putative , Description = Putative polyprotein, identical, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8614_1178-17082' '(at2g39580 : 662.0) CONTAINS InterPro DOMAIN/s: Putative zinc-finger domain (InterPro:IPR019607); Has 249 Blast hits to 219 proteins in 85 species: Archae - 0; Bacteria - 144; Metazoa - 29; Fungi - 8; Plants - 50; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 1324.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF10650)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8741_8859-15459' '(at5g65740 : 338.0) zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Fanconi anemia complex, subunit FancL, WD-repeat region (InterPro:IPR019162). & (gnl|cdd|38478 : 157.0) no description available & (reliability: 676.0) & (original description: Putative BnaCnng13320D, Description = BnaCnng13320D protein, PFAM = PF09765;PF11793)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8760_1602-22477' '(at5g51200 : 531.0) Protein of unknown function (DUF3414); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3414 (InterPro:IPR021827); Has 203 Blast hits to 190 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 120; Fungi - 18; Plants - 55; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|37046 : 136.0) no description available & (reliability: 1062.0) & (original description: Putative Os02g0202300, Description = Os02g0202300 protein, PFAM = PF11894)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8767_32520-42867' '(at1g51560 : 523.0) Pyridoxamine 5'-phosphate oxidase family protein; FUNCTIONS IN: FMN binding; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: FMN-binding split barrel (InterPro:IPR012349), Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain (InterPro:IPR011576), FMN-binding split barrel, related (InterPro:IPR009002); BEST Arabidopsis thaliana protein match is: Pyridoxamine 5'-phosphate oxidase family protein (TAIR:AT3G21140.1); Has 633 Blast hits to 633 proteins in 219 species: Archae - 0; Bacteria - 353; Metazoa - 24; Fungi - 0; Plants - 140; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). & (reliability: 1046.0) & (original description: Putative BnaC06g08870D, Description = BnaC06g08870D protein, PFAM = PF13883)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8849_8251-52284' '(at2g22140 : 251.0) Forms a complex with MUS81 that functions as endonuclease in DNA recombination and repair processes.; essential meiotic endonuclease 1B (EME1B); CONTAINS InterPro DOMAIN/s: ERCC4 domain (InterPro:IPR006166); BEST Arabidopsis thaliana protein match is: essential meiotic endonuclease 1A (TAIR:AT2G21800.1); Has 542 Blast hits to 486 proteins in 142 species: Archae - 0; Bacteria - 42; Metazoa - 170; Fungi - 104; Plants - 48; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|87979 : 138.0) no description available & (reliability: 502.0) & (original description: Putative EME1, Description = Crossover junction endonuclease EME1, PFAM = PF02732)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8881_30802-34662' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8888_5513-8042' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8961_34259-37209' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold8980_35196-38148' ' (original description: Putative BEH, Description = Brassinazole-resistant 1 protein, PFAM = PF05687)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold9008_7112-12640' ' no hits & (original description: Putative PGSC0003DMG400030714, Description = RING/U-box superfamily protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold9063_28622-44645' '(at4g28080 : 1821.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G01320.2); Has 11837 Blast hits to 4947 proteins in 554 species: Archae - 95; Bacteria - 3252; Metazoa - 4987; Fungi - 1783; Plants - 350; Viruses - 14; Other Eukaryotes - 1356 (source: NCBI BLink). & (gnl|cdd|37050 : 348.0) no description available & (reliability: 3642.0) & (original description: Putative TSS, Description = Eukaryotic translation initiation factor 3 subunit, putative, PFAM = PF15044;PF13424;PF13424;PF12807)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold9077_4286-7197' ' no hits & (original description: Putative NAC1, Description = NAC transcription factor, PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold9094_8548-17812' ' no hits & (original description: Putative PGSC0003DMG400009993, Description = Putative localized to the inner membrane of the chloroplast-like, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold9188_46925-49458' '(at1g07090 : 229.0) LIGHT SENSITIVE HYPOCOTYLS 6 (LSH6); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT5G58500.1); Has 311 Blast hits to 311 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68427 : 224.0) no description available & (reliability: 458.0) & (original description: Putative ELE, Description = Protein ELONGATED EMPTY GLUME, PFAM = PF04852)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold9223_35557-43901' '(at1g14180 : 215.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G18260.1); Has 163 Blast hits to 162 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 1; Plants - 160; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 430.0) & (original description: Putative Os10g0406200, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold9227_48291-51280' '(at4g35560 : 99.8) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT5G05570.2). & (reliability: 199.6) & (original description: Putative BnaA07g07530D, Description = BnaA07g07530D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold9247_6372-8945' ' no hits & (original description: Putative PGSC0003DMG400031147, Description = , PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold9276_4509-7547' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold9305_16664-20001' '(at3g07470 : 160.0) Protein of unknown function, DUF538; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT3G07460.1); Has 638 Blast hits to 638 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 637; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|86647 : 135.0) no description available & (reliability: 320.0) & (original description: Putative mc304, Description = AT3g07470/F21O3_18, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold9333_19081-28075' '(at2g25730 : 597.0) unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages. & (gnl|cdd|37022 : 113.0) no description available & (reliability: 1194.0) & (original description: Putative , Description = Zinc finger FYVE domain-containing protein 26 isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold9425_7581-9883' ' no hits & (original description: Putative orf101c, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold9426_19230-23031' ' no hits & (original description: Putative GNC, Description = GATA transcription factor, PFAM = PF00320)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold9503_11080-17921' '(at4g16580 : 545.0) Protein phosphatase 2C family protein; FUNCTIONS IN: phosphoprotein phosphatase activity, catalytic activity; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Sporulation stage II, protein E C-terminal (InterPro:IPR010822); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66720.1); Has 838 Blast hits to 828 proteins in 210 species: Archae - 0; Bacteria - 2; Metazoa - 184; Fungi - 235; Plants - 232; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (gnl|cdd|36593 : 325.0) no description available & (reliability: 1090.0) & (original description: Putative At4g16580, Description = Probable protein phosphatase 2C 55, PFAM = PF07228)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold9559_7104-9949' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold9592_8140-13103' ' (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold9676_21954-25871' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold9676_37870-50232' '(at1g03180 : 276.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 552.0) & (original description: Putative BnaCnng68240D, Description = BnaCnng68240D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold9710_16956-26976' '(at1g45688 : 198.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative Os06g0163300, Description = Os06g0163300 protein, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold9728_1-12813' ' no hits & (original description: Putative PGSC0003DMG400007472, Description = Os07g0686300 protein, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold9759_7342-36813' '(at1g67080 : 221.0) Encodes a protein involved in the photoprotection of PSII. An aba4-1 mutant completely lacks neoxanthin,a component of the chromophore of the peripheral antenna system in PSII. ABA4 is required for neoxanthin biosynthesis, an intermediary step in abscisic acid biosynthesis, but no catalytic activity has been detected for the ABA4 protein.; abscisic acid (ABA)-deficient 4 (ABA4); INVOLVED IN: abscisic acid biosynthetic process, regulation of superoxide anion generation, xanthophyll metabolic process, photoprotection; LOCATED IN: PSII associated light-harvesting complex II, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 723 Blast hits to 723 proteins in 64 species: Archae - 0; Bacteria - 78; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 587 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative ABA4, Description = Protein ABA DEFICIENT 4, chloroplastic, PFAM = PF14108)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold9819_13015-15598' ' no hits & (original description: Putative , Description = , PFAM = PF17181)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold9826_828-10234' '(at5g46560 : 235.0) CONTAINS InterPro DOMAIN/s: Inner nuclear membrane protein MAN1 (InterPro:IPR018996); Has 58 Blast hits to 58 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 11; Fungi - 15; Plants - 20; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 470.0) & (original description: Putative At5g46560, Description = Man1-Src1p-carboxy-terminal domain protein, PFAM = PF09402)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold10072_35699-38010' ' no hits & (original description: Putative Os08g0266200, Description = Os08g0266200 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold10090_3826-6970' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold10153_30401-49059' '(at2g02410 : 384.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF901 (InterPro:IPR010298). & (gnl|cdd|69511 : 170.0) no description available & (reliability: 768.0) & (original description: Putative OSJNBa0032G11.4, Description = Expressed protein (With alternative splicing), PFAM = PF05991)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold10164_26669-42309' ' no hits & (original description: Putative PGSC0003DMG401006753, Description = High chlorophyll fluorescence 153, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold10200_13431-17604' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold10310_38714-45002' '(at5g51130 : 292.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: protein methyltransferase activity, methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456), Bicoid-interacting 3 (InterPro:IPR010675); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38110 : 249.0) no description available & (gnl|cdd|70333 : 152.0) no description available & (reliability: 584.0) & (original description: Putative At5g51130, Description = Probable RNA methyltransferase At5g51130, PFAM = PF06859;PF06325)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold10318_44536-47597' '(at4g33890 : 231.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative At2g14850, Description = Putative uncharacterized protein At2g14850, PFAM = PF12767)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold10370_62530-72274' '(gnl|cdd|36290 : 128.0) no description available & (at1g26110 : 127.0) Encodes Decapping 5, required for mRNA decapping, P-body formation and translational repression during postembryonic development.; decapping 5 (DCP5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: negative regulation of translation, deadenylation-independent decapping of nuclear-transcribed mRNA, cytoplasmic mRNA processing body assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DFDF motif (InterPro:IPR019050), FFD/TFG box motif (InterPro:IPR019053); BEST Arabidopsis thaliana protein match is: decapping 5-like (TAIR:AT5G45330.1); Has 14874 Blast hits to 10327 proteins in 603 species: Archae - 12; Bacteria - 902; Metazoa - 6418; Fungi - 2978; Plants - 1226; Viruses - 261; Other Eukaryotes - 3077 (source: NCBI BLink). & (gnl|cdd|29723 : 117.0) no description available & (reliability: 254.0) & (original description: Putative lsm14, Description = Protein LSM14 B, PFAM = PF12701;PF09532)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold10411_10774-16206' '(at5g42070 : 113.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative F383_05522, Description = Putative E3 ubiquitin-protein ligase MARCH10, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold10477_46368-48356' '(at4g16410 : 153.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF751 (InterPro:IPR008470); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative PrxQ, Description = Peroxiredoxin Q, chloroplastic, PFAM = PF05421)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold10520_27392-32944' ' (original description: Putative CRF2, Description = Ethylene-responsive transcription factor CRF4, PFAM = PF00847;PF00847)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold10559_35563-40405' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold10737_19885-27678' '(at3g12150 : 591.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2048 (InterPro:IPR019149); Has 421 Blast hits to 334 proteins in 155 species: Archae - 2; Bacteria - 147; Metazoa - 215; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|36764 : 428.0) no description available & (reliability: 1182.0) & (original description: Putative MTR_7g092680, Description = Alpha/beta hydrolase family protein, PFAM = PF09752;PF09752)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold10780_9589-12308' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Retrovirus-related Pol polyprotein LINE-1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold10890_40695-43648' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold10938_34781-37285' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold10960_29492-36526' '(at2g36420 : 124.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03670.1); Has 10588 Blast hits to 6606 proteins in 440 species: Archae - 8; Bacteria - 365; Metazoa - 4146; Fungi - 1198; Plants - 483; Viruses - 212; Other Eukaryotes - 4176 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative PGSC0003DMG400028260, Description = , PFAM = PF14309)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold11075_21555-24265' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold11095_40091-43862' '(at2g42780 : 172.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684). & (reliability: 344.0) & (original description: Putative PGSC0003DMG400017292, Description = RNA polymerase II transcription factor SIII (Elongin) subunit A, PFAM = PF06881)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold11156_108-6127' '(gnl|cdd|71335 : 204.0) no description available & (at3g29575 : 125.0) ABI five binding protein 3 (AFP3); FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1675 (InterPro:IPR012463); BEST Arabidopsis thaliana protein match is: ABI five binding protein (TAIR:AT1G69260.1); Has 196 Blast hits to 190 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 4; Plants - 184; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative abac5, Description = Ninja-family protein AFP2, PFAM = PF16136;PF16135;PF07897)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold11171_8209-10748' '(at1g29195 : 132.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 180 Blast hits to 180 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative Os01g0826800, Description = Os01g0826800 protein, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold11246_44965-46748' '(at5g38700 : 146.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02170.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative , Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold11268_8023-10622' '(gnl|cdd|68182 : 173.0) no description available & (at3g28630 : 170.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF569 (InterPro:IPR007679), Actin cross-linking (InterPro:IPR008999); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF569) (TAIR:AT3G01311.1); Has 232 Blast hits to 210 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative At1g27100, Description = Actin cross-linking protein, PFAM = PF04601)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold11279_40146-46000' '(at5g04670 : 385.0) Enhancer of polycomb-like transcription factor protein; CONTAINS InterPro DOMAIN/s: Enhancer of polycomb-like (InterPro:IPR019542); BEST Arabidopsis thaliana protein match is: Enhancer of polycomb-like transcription factor protein (TAIR:AT4G32620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37472 : 87.0) no description available & (reliability: 770.0) & (original description: Putative BnaAnng01010D, Description = Enhancer of polycomb-like protein, PFAM = PF10513)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold11325_956-30583' '(at5g45610 : 254.0) Encodes a homologue of the ATR-interacting protein ATRIP. Mutant (named sensitive to UV2 or suv2) is UVB-hypersensitive and defective in DNA damage response.; SENSITIVE TO UV 2 (SUV2); Has 65 Blast hits to 63 proteins in 29 species: Archae - 0; Bacteria - 2; Metazoa - 9; Fungi - 13; Plants - 35; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 508.0) & (original description: Putative PGSC0003DMG402009319, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold11325_9000-23362' '(at5g45610 : 89.7) Encodes a homologue of the ATR-interacting protein ATRIP. Mutant (named sensitive to UV2 or suv2) is UVB-hypersensitive and defective in DNA damage response.; SENSITIVE TO UV 2 (SUV2); Has 65 Blast hits to 63 proteins in 29 species: Archae - 0; Bacteria - 2; Metazoa - 9; Fungi - 13; Plants - 35; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold11325_25986-30697' ' no hits & (original description: Putative PGSC0003DMG402009319, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold11337_824-4671' '(at1g61600 : 300.0) Protein of unknown function (DUF1262); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1262 (InterPro:IPR010683); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1262) (TAIR:AT1G13540.1); Has 103 Blast hits to 96 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70353 : 249.0) no description available & (reliability: 600.0) & (original description: Putative T25B24.5, Description = T25B24.5 protein, PFAM = PF06880)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold11398_42942-45784' ' (original description: Putative CRF1, Description = Ethylene-responsive transcription factor RAP2-11, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold11427_1477-19612' '(at5g08720 : 151.0) CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis thaliana protein match is: Polyketide cyclase / dehydrase and lipid transport protein (TAIR:AT4G01650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative At5g08720, Description = At5g08720, PFAM = PF03364)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold11543_1-6319' '(at5g56210 : 85.1) WPP domain interacting protein 2 (WIP2); BEST Arabidopsis thaliana protein match is: WPP domain interacting protein 1 (TAIR:AT4G26455.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative PGSC0003DMG400008693, Description = Putative WPP domain-interacting protein 2-like, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold11622_28998-44412' '(at4g11860 : 452.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF544 (InterPro:IPR007518), Ubiquitin interacting motif (InterPro:IPR003903); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF544) (TAIR:AT4G22960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37638 : 199.0) no description available & (gnl|cdd|68015 : 152.0) no description available & (reliability: 904.0) & (original description: Putative Ni, Description = Protein FAM63A, PFAM = PF04424)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold11641_40223-42483' ' (original description: Putative D1, Description = Flower-specific defensin, PFAM = PF00304)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold11644_1-27799' '(at1g55535 : 291.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13420.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 582.0) & (original description: Putative BnaA08g29280D, Description = BnaA08g29280D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold11730_20451-23249' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold11754_40734-43261' ' no hits & (original description: Putative Os07g0686300, Description = Putative E3 ubiquitin-protein ligase Arkadia-like, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold11757_1683-4411' '(at4g05400 : 194.0) copper ion binding; FUNCTIONS IN: copper ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative Sb04g001080, Description = Putative uncharacterized protein Sb04g001080, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold11816_2038-5238' '(at1g31940 : 146.0) unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35585.1); Has 67 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative At1g31940, Description = At1g31940/F5M6.6, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold11842_37921-40727' ' no hits & (original description: Putative PSK3, Description = Phytosulfokine 3, putative isoform 1, PFAM = PF06404)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold11848_21791-29675' '(at5g11600 : 95.9) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative TCM_047092, Description = Translation initiation factor IF-2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold11852_15053-45570' '(at3g44330 : 686.0) INVOLVED IN: protein processing; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicalin (InterPro:IPR016574), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Nicastrin (InterPro:IPR008710); Has 245 Blast hits to 243 proteins in 99 species: Archae - 6; Bacteria - 10; Metazoa - 139; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|37737 : 567.0) no description available & (reliability: 1372.0) & (original description: Putative NCLN, Description = Nicalin, PFAM = PF05450)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold11871_12243-14674' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold11917_23468-36300' '(at1g53040 : 558.0) Protein of unknown function (DUF616); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF616 (InterPro:IPR006852); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF616) (TAIR:AT1G28240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68342 : 465.0) no description available & (reliability: 1116.0) & (original description: Putative BnaA08g18470D, Description = BnaA08g18470D protein, PFAM = PF04765)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold11932_35423-41860' '(at5g66290 : 231.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative Os03g0727100, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold12014_6952-11339' '(at5g53020 : 335.0) Ribonuclease P protein subunit P38-related; BEST Arabidopsis thaliana protein match is: Ribonuclease P protein subunit P38-related (TAIR:AT3G45900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 670.0) & (original description: Putative At5g53020, Description = Emb}, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold12014_37350-40767' '(at5g53030 : 93.6) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold12141_33646-36013' ' no hits & (original description: Putative PGSC0003DMG400041004, Description = Gag-pro-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold12191_7912-14231' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold12227_24892-30246' ' (original description: Putative cad, Description = Arginine decarboxylase, PFAM = PF01276;PF03711)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold12234_30569-36718' '(at1g08480 : 189.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane, plastid, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative SDH6, Description = Succinate dehydrogenase subunit 6, mitochondrial, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold12243_6382-8915' ' no hits & (original description: Putative , Description = , PFAM = PF15365)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold12259_9311-13082' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold12269_25644-34210' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold12386_38028-40360' ' no hits & (original description: Putative orf111b, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold12400_22209-27594' '(at1g70900 : 367.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23110.4); Has 57 Blast hits to 57 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 734.0) & (original description: Putative BnaC06g32050D, Description = BnaC06g32050D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold12575_22717-25037' ' (original description: Putative RT, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold12589_40326-43826' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold12621_30860-34734' '(at2g43250 : 595.0) unknown protein; Has 32 Blast hits to 32 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1190.0) & (original description: Putative BnaA04g24920D, Description = BnaA04g24920D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold12641_16014-22414' '(at4g24380 : 168.0) CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37762 : 115.0) no description available & (reliability: 336.0) & (original description: Putative At5g65400, Description = UPF0483 protein AGAP003155-like protein, PFAM = PF03959)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold12654_6097-9152' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold12711_1295-8105' ' (original description: Putative ZOSMA_123G00390, Description = Protein SMG9, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold12809_2873-16669' ' no hits & (original description: Putative pdb1, Description = Methyl-CpG-binding domain protein, PFAM = PF01429)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold12824_28302-31811' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold12845_22729-29380' '(at5g56850 : 115.0) unknown protein; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative PGSC0003DMG401013152, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold13151_6794-13579' '(at1g53250 : 156.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53800.1); Has 11909 Blast hits to 7704 proteins in 757 species: Archae - 51; Bacteria - 1338; Metazoa - 4550; Fungi - 987; Plants - 464; Viruses - 24; Other Eukaryotes - 4495 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative PGSC0003DMG400015334, Description = BnaA06g01030D protein, PFAM = PF07460)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold13158_6757-9083' ' (original description: Putative RT, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold13174_22801-29143' ' no hits & (original description: Putative pAFD103, Description = PAFD103 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold13195_41864-43015' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold13217_34557-42094' '(at3g47850 : 108.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; Has 57 Blast hits to 57 proteins in 32 species: Archae - 0; Bacteria - 5; Metazoa - 12; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative PGSC0003DMG400033064, Description = Plant/T23J7-180 protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold13275_16447-20335' ' no hits & (original description: Putative Os04g0600100, Description = OSJNBa0083N12.10 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold13337_14150-16099' '(at4g28703 : 137.0) RmlC-like cupins superfamily protein; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Protein of unknown function DUF861, cupin-3 (InterPro:IPR008579), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69424 : 91.0) no description available & (reliability: 274.0) & (original description: Putative At4g10300, Description = At4g10300, PFAM = PF05899)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold13446_14971-17516' '(at2g17972 : 113.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 34 Blast hits to 34 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative At2g17972, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold13517_21375-24393' '(at3g07470 : 174.0) Protein of unknown function, DUF538; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT3G07460.1); Has 638 Blast hits to 638 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 637; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|86647 : 139.0) no description available & (reliability: 348.0) & (original description: Putative mc304, Description = AT3g07470/F21O3_18, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold13530_1-3801' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold13587_40156-42388' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold13600_38933-41454' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold13659_5618-8696' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold13665_38903-42264' '(at1g44780 : 119.0) INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Histone chaperone domain CHZ (InterPro:IPR019098); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative , Description = Uncharacterized protein isoform 2, PFAM = PF09649)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold13700_2087-9272' '(at1g50120 : 107.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rgp1 (InterPro:IPR014848), Immunoglobulin E-set (InterPro:IPR014756); Has 144 Blast hits to 140 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 86; Fungi - 10; Plants - 39; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative At1g50120, Description = Putative uncharacterized protein At1g50120, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold13747_6901-9815' ' no hits & (original description: Putative Tgt1ORF2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold13759_9190-40244' '(at1g67140 : 1179.0) SWEETIE (SWEETIE); FUNCTIONS IN: binding; INVOLVED IN: trehalose metabolic process, carbohydrate metabolic process, starch metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024). & (gnl|cdd|37033 : 433.0) no description available & (reliability: 2358.0) & (original description: Putative Os06g0505100, Description = HEAT repeat-containing protein isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold13760_3846-13465' '(at4g14950 : 592.0) SNARE associated Golgi protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36325 : 345.0) no description available & (reliability: 1184.0) & (original description: Putative KMS1, Description = Vacuole membrane protein KMS1, PFAM = PF09335)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold13781_9456-14541' '(at2g15730 : 511.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G34420.1); Has 149 Blast hits to 147 proteins in 26 species: Archae - 0; Bacteria - 31; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1022.0) & (original description: Putative PGSC0003DMG400025901, Description = Sulfotransferase, PFAM = PF00685)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold13846_28042-30527' ' no hits & (original description: Putative , Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold13913_541-3170' '(at5g65520 : 151.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative At5g65520, Description = Putative uncharacterized protein At5g65520, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold13936_3021-9244' '(at2g32280 : 147.0) Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT4G21310.1); Has 170 Blast hits to 169 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative At2g32280, Description = At2g32280, PFAM = PF06749)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold13971_16561-38433' ' no hits & (original description: Putative At5g40450, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold13972_30165-36139' '(at5g14240 : 307.0) Thioredoxin superfamily protein; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); Has 1075 Blast hits to 1075 proteins in 388 species: Archae - 0; Bacteria - 2; Metazoa - 646; Fungi - 206; Plants - 103; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|38380 : 246.0) no description available & (gnl|cdd|48537 : 239.0) no description available & (reliability: 614.0) & (original description: Putative pdcl3, Description = Phosducin-like protein 3, PFAM = PF02114)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold14140_36036-41471' '(at5g13470 : 90.5) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold14142_34799-37369' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold14156_7860-11629' ' (original description: Putative POLR2A, Description = Cell wall hydroxyproline-rich glycoprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold14163_4646-9674' '(at4g25170 : 131.0) Uncharacterised conserved protein (UCP012943); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP012943 (InterPro:IPR016606); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein (UCP012943) (TAIR:AT5G61490.1); Has 19 Blast hits to 19 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold14213_165-3712' '(at4g02720 : 214.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF926 (InterPro:IPR009269); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69563 : 126.0) no description available & (gnl|cdd|38023 : 99.4) no description available & (reliability: 428.0) & (original description: Putative nkap, Description = NF-kappa-B-activating protein, PFAM = PF06047)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold14298_27416-29853' ' (original description: Putative PGSC0003DMG400041390, Description = , PFAM = PF05938)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold14323_31766-38979' ' no hits & (original description: Putative , Description = , PFAM = PF02042)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold14333_33681-37432' ' no hits & (original description: Putative PGSC0003DMG400008629, Description = UPF0329 protein ECU01_0100/ECU01_1510/ECU08_0030, putative isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold14420_2257-8054' '(at1g27510 : 173.0) FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: response to singlet oxygen; LOCATED IN: thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3506 (InterPro:IPR021894), UvrB/UvrC protein (InterPro:IPR001943); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3506) (TAIR:AT4G33630.2); Has 287 Blast hits to 280 proteins in 95 species: Archae - 0; Bacteria - 15; Metazoa - 66; Fungi - 43; Plants - 121; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative EX1, Description = Protein EXECUTER 2, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold14436_29670-32479' '(at5g11890 : 120.0) FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G17620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70773 : 97.3) no description available & (reliability: 240.0) & (original description: Putative BnaA08g23020D, Description = BnaA08g23020D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold14444_32174-39409' '(at5g05190 : 82.4) Protein of unknown function (DUF3133); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3133 (InterPro:IPR021480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3133) (TAIR:AT3G56410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative , Description = , PFAM = PF11331)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold14453_53040-56332' ' no hits & (original description: Putative PGSC0003DMG400029280, Description = , PFAM = PF07839)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold14516_11008-17857' '(at3g55760 : 481.0) unknown protein; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G42430.2). & (reliability: 962.0) & (original description: Putative At3g55760, Description = At3g55760, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold14560_26381-31463' '(at2g01340 : 148.0) Encodes a protein whose expression is responsive to nematode infection.; At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, response to nematode; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 110 Blast hits to 110 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative At1g66480, Description = At2g01340, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold14597_11793-39701' '(at5g10730 : 399.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G15910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39489 : 306.0) no description available & (gnl|cdd|31046 : 80.7) no description available & (reliability: 798.0) & (original description: Putative At5g10730, Description = AT5g10730/MAJ23_90, PFAM = PF13460)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold14627_1-15205' '(at2g47960 : 576.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF974 (InterPro:IPR010378); Has 285 Blast hits to 284 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 150; Fungi - 68; Plants - 32; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|69666 : 336.0) no description available & (gnl|cdd|37836 : 210.0) no description available & (reliability: 1152.0) & (original description: Putative SCC3, Description = , PFAM = PF06159)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold14653_31706-39707' '(at2g39740 : 302.0) Nucleotidyltransferase family protein; BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT3G45750.1); Has 1708 Blast hits to 1608 proteins in 227 species: Archae - 0; Bacteria - 13; Metazoa - 799; Fungi - 328; Plants - 255; Viruses - 0; Other Eukaryotes - 313 (source: NCBI BLink). & (gnl|cdd|37488 : 121.0) no description available & (reliability: 604.0) & (original description: Putative HESO1, Description = HEN1 suppressor 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold14708_1033-7895' '(at1g74160 : 197.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G18620.1); Has 3407 Blast hits to 2217 proteins in 314 species: Archae - 0; Bacteria - 264; Metazoa - 1296; Fungi - 318; Plants - 346; Viruses - 34; Other Eukaryotes - 1149 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative PGSC0003DMG400001462, Description = BnaA02g16740D protein, PFAM = PF14309)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold14727_18497-32923' '(at1g27385 : 230.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454); Has 79 Blast hits to 79 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative , Description = , PFAM = PF04359)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold14749_4331-8124' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold14907_23530-30431' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold14948_4228-16889' '(at1g18730 : 197.0) likely a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located on the thylakoid membrane. Mutant has impaired NAD(P)H dehydrogenase activity.; NDH dependent flow 6 (NDF6); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative PNSB4, Description = Photosynthetic NDH subunit of subcomplex B 4, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold14998_833-8694' '(at3g58600 : 293.0) Adaptin ear-binding coat-associated protein 1 NECAP-1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: endocytosis; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adaptin ear-binding coat-associated protein 1 NECAP-1 (InterPro:IPR012466); BEST Arabidopsis thaliana protein match is: non-intrinsic ABC protein 4 (TAIR:AT1G03900.1); Has 463 Blast hits to 463 proteins in 142 species: Archae - 0; Bacteria - 2; Metazoa - 232; Fungi - 69; Plants - 94; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|37711 : 258.0) no description available & (gnl|cdd|87402 : 220.0) no description available & (reliability: 586.0) & (original description: Putative Sb03g027830, Description = Putative uncharacterized protein Sb03g027830, PFAM = PF07933)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold15010_17647-20456' '(at4g26490 : 194.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G56050.1); Has 421 Blast hits to 420 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 421; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 102.0) no description available & (reliability: 388.0) & (original description: Putative BnaA10g28910D, Description = BnaA10g28910D protein, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold15061_2265-5590' '(at2g33510 : 136.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28070.1). & (reliability: 272.0) & (original description: Putative BnaCnng51740D, Description = BnaCnng51740D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold15078_8433-11078' ' no hits & (original description: Putative PGSC0003DMG400038980, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold15137_3803-6801' ' no hits & (original description: Putative Dif54, Description = Extensin-like protein Dif54, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold15151_36051-39742' '(at4g18540 : 590.0) unknown protein; Has 209 Blast hits to 205 proteins in 54 species: Archae - 0; Bacteria - 17; Metazoa - 2; Fungi - 150; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1180.0) & (original description: Putative BnaAnng30480D, Description = BnaAnng30480D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold15203_33603-36286' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold15298_2428-4898' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold15343_7724-16383' '(at4g24610 : 647.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65440.1). & (reliability: 1294.0) & (original description: Putative At5g48310, Description = BnaA06g30300D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold15379_446-5753' '(at5g35320 : 84.7) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold15467_9413-19555' '(at4g24680 : 233.0) Encodes MOS1 (MODIFIER OF snc1). MOS1 contains a BAT2 domain that is conserved in plants and animals. MOS1 regulates the expression of SNC1, a TIR-NB-LRR-type of R protein.; MODIFIER OF snc1 (MOS1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of gene expression, epigenetic; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; Has 5806 Blast hits to 4291 proteins in 546 species: Archae - 8; Bacteria - 946; Metazoa - 2312; Fungi - 705; Plants - 202; Viruses - 15; Other Eukaryotes - 1618 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative PGSC0003DMG402018164, Description = BnaA01g14040D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold15480_24042-27555' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold15486_11400-34105' '(at5g49150 : 803.0) Encodes a transmembrane domain containing protein expressed in sperm cells.; gamete expressed 2 (GEX2); CONTAINS InterPro DOMAIN/s: Filamin/ABP280 repeat (InterPro:IPR001298), Immunoglobulin-like fold (InterPro:IPR013783), Immunoglobulin E-set (InterPro:IPR014756), Filamin/ABP280 repeat-like (InterPro:IPR017868); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1606.0) & (original description: Putative GEX2, Description = Gamete expressed 2, PFAM = PF00630;PF00630)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold15651_27064-34998' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold15672_9369-14085' '(at5g54890 : 464.0) RNA-binding CRS1 / YhbY (CRM) domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, C globular stage, F mature embryo stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain-containing protein (TAIR:AT4G31010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85815 : 89.8) no description available & (reliability: 928.0) & (original description: Putative At5g54890, Description = CRS2-associated factor 2, mitochondrial, PFAM = PF01985;PF01985)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold15693_56-6075' '(at1g48110 : 466.0) evolutionarily conserved C-terminal region 7 (ECT7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 6 (TAIR:AT3G17330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37112 : 341.0) no description available & (gnl|cdd|67749 : 158.0) no description available & (reliability: 932.0) & (original description: Putative ECT6, Description = At3g17330, PFAM = PF04146)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold15738_36030-38537' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold15791_3063-6685' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold15816_15428-35383' ' (original description: Putative AGL71, Description = MADS-box protein AGL70, PFAM = PF00319)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold15858_1-8040' '(at3g52570 : 282.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: intracellular protein transport, GPI anchor metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: PGAP1-like (InterPro:IPR012908); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G10030.1); Has 2648 Blast hits to 2646 proteins in 970 species: Archae - 27; Bacteria - 1772; Metazoa - 182; Fungi - 164; Plants - 106; Viruses - 0; Other Eukaryotes - 397 (source: NCBI BLink). & (gnl|cdd|37593 : 150.0) no description available & (reliability: 564.0) & (original description: Putative At3g52570, Description = Abhydrolase domain-containing protein 11, PFAM = PF12697)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold15861_12784-20622' '(at3g47450 : 671.0) Encodes a protein with similarity to the bacterial YqeH GTPase required for proper ribosome assembly. In Arabidopsis, mutant analyses show that this protein regulates growth and hormonal signaling in plants. It also attenuates oxidative stress and reactive oxygen species (ROS). It also seems to be involved in regulating leaf senescence and cell death. This gene product is also involved in nitric oxide biosynthesis in response to ABA but not exogenous H2O2. This protein also appears to be required for proper plastid biogenesis. Levels of several plastid-localized proteins, including RBCL, ClpP1, and the MEP biosynthesis enzymes DXS and DXR are altered in rif1-1 mutants. This protein was originally characterized as a mitrochondrial-localized nitric oxide synthase, but, the synthase activity was later disproven. In addition, new studies with GFP fusion proteins and chloroplast import assays suggest that this protein is found in chloroplasts.; NO ASSOCIATED 1 (NOA1); FUNCTIONS IN: GTPase activity; INVOLVED IN: in 8 processes; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G57180.1); Has 1589 Blast hits to 1531 proteins in 754 species: Archae - 6; Bacteria - 1199; Metazoa - 159; Fungi - 35; Plants - 109; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (q6ypg5|nos_orysa : 650.0) Putative nitric-oxide synthase (EC 1.14.13.39) - Oryza sativa (Rice) & (gnl|cdd|36463 : 347.0) no description available & (gnl|cdd|57926 : 168.0) no description available & (reliability: 1342.0) & (original description: Putative NOA1, Description = NO-associated protein 1, chloroplastic/mitochondrial, PFAM = PF01926)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold15919_437-23632' '(at1g33410 : 1342.0) SUPPRESSOR OF AUXIN RESISTANCE1 (SAR1); INVOLVED IN: mRNA export from nucleus, response to auxin stimulus, developmental process; LOCATED IN: nuclear membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoporin Nup120/160 (InterPro:IPR021717). & (gnl|cdd|39721 : 676.0) no description available & (reliability: 2684.0) & (original description: Putative NUP160, Description = Nuclear pore complex protein NUP160, PFAM = PF17238;PF11715)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold15948_28791-37623' '(at4g22860 : 268.0) Cell cycle regulated microtubule associated protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Cell cycle regulated microtubule associated protein (InterPro:IPR022021); BEST Arabidopsis thaliana protein match is: Cell cycle regulated microtubule associated protein (TAIR:AT4G11990.1); Has 104 Blast hits to 96 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 3; Plants - 81; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative BnaA08g10490D, Description = BnaA08g10490D protein, PFAM = PF12214)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold15955_34930-37244' ' no hits & (original description: Putative , Description = , PFAM = PF07333)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold15978_377-6967' '(at1g14300 : 314.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0507 (InterPro:IPR007205), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Uncharacterised protein family UPF0507, C-terminal (InterPro:IPR007206). & (gnl|cdd|38184 : 179.0) no description available & (gnl|cdd|86526 : 128.0) no description available & (reliability: 628.0) & (original description: Putative MTR_8g055880, Description = Armadillo/beta-catenin-like repeat protein, PFAM = PF04064;PF04063)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16038_13625-34601' '(at5g48500 : 84.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative PGSC0003DMG400020177, Description = Atp-dependent rna helicase dbp7, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16042_21070-24569' ' no hits & (original description: Putative PGSC0003DMG400026944, Description = CASP-like protein, PFAM = PF04535)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16122_28645-34413' '(at3g11590 : 310.0) unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22310.1); Has 22320 Blast hits to 15179 proteins in 1213 species: Archae - 372; Bacteria - 2307; Metazoa - 10906; Fungi - 1700; Plants - 1146; Viruses - 65; Other Eukaryotes - 5824 (source: NCBI BLink). & (reliability: 620.0) & (original description: Putative F24K9.26, Description = At3g11590/F24K9_26, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16149_5118-7792' ' no hits & (original description: Putative PGSC0003DMG400028755, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16162_6139-8888' '(at3g43520 : 145.0) Transmembrane proteins 14C; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0136, Transmembrane (InterPro:IPR005349); BEST Arabidopsis thaliana protein match is: Transmembrane proteins 14C (TAIR:AT2G26240.1); Has 541 Blast hits to 527 proteins in 134 species: Archae - 4; Bacteria - 94; Metazoa - 236; Fungi - 13; Plants - 153; Viruses - 7; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|39468 : 87.7) no description available & (gnl|cdd|67275 : 85.0) no description available & (reliability: 290.0) & (original description: Putative FAX7, Description = Protein FATTY ACID EXPORT 7, PFAM = PF03647)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16200_25877-28440' ' no hits & (original description: Putative PMEI, Description = Petin methylesterase inhibitor, PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16269_2964-5677' ' no hits & (original description: Putative , Description = , PFAM = PF07939)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16290_34749-37623' '(at5g08770 : 156.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16436_5972-15248' ' no hits & (original description: Putative KCS, Description = Putative elongation of fatty acids protein 3-like, PFAM = PF01151)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16478_24462-27486' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16531_1-55396' '(at1g50730 : 395.0) unknown protein; Has 218 Blast hits to 209 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 141; Fungi - 2; Plants - 33; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|38886 : 317.0) no description available & (reliability: 790.0) & (original description: Putative RCOM_0752350, Description = Esophageal cancer associated protein, putative, PFAM = PF03635)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16531_26736-47622' '(at1g50730 : 363.0) unknown protein; Has 218 Blast hits to 209 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 141; Fungi - 2; Plants - 33; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|38886 : 285.0) no description available & (reliability: 726.0) & (original description: Putative At1g50730, Description = Esophageal cancer associated protein, putative, PFAM = PF03635)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16540_13550-16287' ' no hits & (original description: Putative PGSC0003DMG400043569, Description = Zinc finger-like protein, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16577_2418-4867' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16646_1-7639' '(at4g02405 : 273.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Leucine carboxyl methyltransferase (InterPro:IPR007213); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 546.0) & (original description: Putative At4g02405, Description = S-adenosyl-L-methionine-dependent methyltransferases superfamily protein, PFAM = PF04072)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16649_31247-33960' '(at5g59350 : 86.7) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative PGSC0003DMG400008699, Description = BnaA10g12370D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16707_10532-13116' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16712_24910-27383' ' no hits & (original description: Putative EAS, Description = 5-epi-aristolochene synthase, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16787_28147-36964' '(at3g26850 : 134.0) histone-lysine N-methyltransferases; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chromosome; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SRI, Set2 Rpb1 interacting (InterPro:IPR013257); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT3G18640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative Sb10g008980, Description = Putative uncharacterized protein Sb10g008980, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16814_19825-33551' '(at4g11720 : 758.0) Encodes HAP2 with the following predicted motifs: an N-terminal secretion signal, a single transmembrane domain and a C-terminal histidine-rich domain. HAP2 is expressed only in the haploid sperm and is required for pollen tube guidance and fertilization. Predominantly localized to sperm endoplasmic reticulum membranes. May also reside in other endomembranes, including the plasma membrane.; HAPLESS 2 (HAP2); CONTAINS InterPro DOMAIN/s: Generative cell specific-1, HAP2-GCS1 (InterPro:IPR018928); Has 2122 Blast hits to 1565 proteins in 270 species: Archae - 6; Bacteria - 421; Metazoa - 806; Fungi - 82; Plants - 227; Viruses - 5; Other Eukaryotes - 575 (source: NCBI BLink). & (reliability: 1516.0) & (original description: Putative BnaA09g21450D, Description = BnaA09g21450D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16835_25230-33561' '(at4g21720 : 140.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, sepal, male gametophyte, root, flower; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage. & (reliability: 280.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16838_20690-37467' '(at1g27385 : 222.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454); Has 79 Blast hits to 79 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|67952 : 82.7) no description available & (reliability: 444.0) & (original description: Putative Os02g0507400, Description = Os02g0507400 protein, PFAM = PF04359)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16841_11550-18221' '(at3g04470 : 470.0) Ankyrin repeat family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Protein of unknown function DUF3424 (InterPro:IPR021832), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT1G04780.1); Has 1133 Blast hits to 894 proteins in 124 species: Archae - 0; Bacteria - 10; Metazoa - 597; Fungi - 29; Plants - 361; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|35742 : 441.0) no description available & (reliability: 940.0) & (original description: Putative BnaA09g03520D, Description = BnaA09g03520D protein, PFAM = PF11904)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16847_6897-9329' ' no hits & (original description: Putative , Description = Ty1-copia retrotransposon protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16853_30989-34953' '(at5g35430 : 440.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 227 Blast hits to 213 proteins in 75 species: Archae - 0; Bacteria - 6; Metazoa - 158; Fungi - 2; Plants - 36; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|37682 : 351.0) no description available & (reliability: 880.0) & (original description: Putative , Description = CCR4-NOT transcription complex subunit 10, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16880_1839-4448' '(at2g20760 : 119.0) Clathrin light chain protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin light chain (InterPro:IPR000996); BEST Arabidopsis thaliana protein match is: Clathrin light chain protein (TAIR:AT2G40060.1); Has 1791 Blast hits to 1279 proteins in 282 species: Archae - 0; Bacteria - 563; Metazoa - 557; Fungi - 96; Plants - 161; Viruses - 0; Other Eukaryotes - 414 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative CLC1, Description = Clathrin light chain protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16880_1871-4568' '(at2g20760 : 115.0) Clathrin light chain protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin light chain (InterPro:IPR000996); BEST Arabidopsis thaliana protein match is: Clathrin light chain protein (TAIR:AT2G40060.1); Has 1791 Blast hits to 1279 proteins in 282 species: Archae - 0; Bacteria - 563; Metazoa - 557; Fungi - 96; Plants - 161; Viruses - 0; Other Eukaryotes - 414 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative CLC1, Description = Clathrin light chain protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16887_19332-25629' '(at3g28150 : 364.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 22 (TBL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 19 (TAIR:AT5G15900.1); Has 1337 Blast hits to 1308 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1337; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 108.0) no description available & (reliability: 728.0) & (original description: Putative AXY4L, Description = Protein ALTERED XYLOGLUCAN 4-like, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16995_29047-34280' '(at4g22320 : 100.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55210.1). & (reliability: 200.0) & (original description: Putative BnaC07g37270D, Description = BnaC07g37270D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold16998_733-5505' ' no hits & (original description: Putative PGSC0003DMG400030371, Description = , PFAM = PF00170)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold17027_26934-30979' ' no hits & (original description: Putative , Description = , PFAM = PF03080)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold17031_15-10859' '(at5g25360 : 161.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1). & (reliability: 322.0) & (original description: Putative At3g15770, Description = AT3G15770 protein, PFAM = PF13259;PF13259)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold17062_35292-37194' ' no hits & (original description: Putative nabp, Description = KH domain-containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold17071_18236-23972' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold17115_6021-35783' ' no hits & (original description: Putative PGSC0003DMG400016555, Description = RNase H family protein, PFAM = PF12776)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold17121_3069-6801' '(at2g42110 : 81.3) unknown protein; Has 27 Blast hits to 27 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold17184_9056-11364' ' no hits & (original description: Putative orf103c, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold17200_244-14614' ' no hits & (original description: Putative PGSC0003DMG400003059, Description = Putative ovule protein, PFAM = PF01429;PF01429;PF01429;PF01429)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold17200_6140-14986' ' no hits & (original description: Putative PGSC0003DMG400003059, Description = Putative ovule protein, PFAM = PF01429)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold17280_4185-9785' '(at1g67570 : 412.0) Protein of unknown function (DUF3537); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3537 (InterPro:IPR021924); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3537) (TAIR:AT3G20300.1); Has 140 Blast hits to 140 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 138; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 824.0) & (original description: Putative BnaC06g28600D, Description = BnaC06g28600D protein, PFAM = PF12056)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold17357_379-5947' '(at1g80310 : 498.0) sulfate transmembrane transporters; FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547); BEST Arabidopsis thaliana protein match is: molybdate transporter 1 (TAIR:AT2G25680.1); Has 846 Blast hits to 836 proteins in 367 species: Archae - 24; Bacteria - 581; Metazoa - 20; Fungi - 62; Plants - 71; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 996.0) & (original description: Putative MOT2, Description = Molybdate transporter 2, PFAM = PF16983;PF16983)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold17364_28016-33200' ' no hits & (original description: Putative , Description = Putative heterogeneous nuclear ribonucleoproteins A2/B1-like, PFAM = PF15502)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold17439_32118-34831' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold17504_1-8504' '(at4g34310 : 1212.0) alpha/beta-Hydrolases superfamily protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37240 : 163.0) no description available & (reliability: 2424.0) & (original description: Putative At4g34310, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold17614_2570-5594' ' no hits & (original description: Putative GOT1A, Description = Vesicle transport protein GOT1A, PFAM = PF04178)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold17753_12760-17104' '(at4g17960 : 130.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G46620.1); Has 46 Blast hits to 45 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative F383_13537, Description = Putative phospholipid hydroperoxide glutathione peroxidase, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold17786_32105-39887' '(at3g23070 : 403.0) Encodes a CRM domain protein CFM3a, involved in group IIB intron splicing in chloroplasts.; CRM family member 3A (CFM3A); FUNCTIONS IN: RNA binding; INVOLVED IN: seed development, Group II intron splicing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: CRM family member 3B (TAIR:AT4G14510.1); Has 676 Blast hits to 606 proteins in 108 species: Archae - 3; Bacteria - 41; Metazoa - 114; Fungi - 55; Plants - 403; Viruses - 3; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|37201 : 201.0) no description available & (gnl|cdd|85815 : 92.9) no description available & (reliability: 806.0) & (original description: Putative crs1, Description = Chloroplastic group IIA intron splicing facilitator CRS1, PFAM = PF01985;PF01985;PF01985)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold17813_9804-13621' '(at4g33690 : 100.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; Has 543 Blast hits to 512 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 281; Fungi - 54; Plants - 72; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative Sb02g006450, Description = Putative uncharacterized protein Sb02g006450, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold17821_8001-34807' '(at5g24280 : 917.0) GAMMA-IRRADIATION AND MITOMYCIN C INDUCED 1 (GMI1); BEST Arabidopsis thaliana protein match is: defective in meristem silencing 3 (TAIR:AT3G49250.1); Has 114 Blast hits to 102 proteins in 24 species: Archae - 0; Bacteria - 7; Metazoa - 8; Fungi - 4; Plants - 91; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 1834.0) & (original description: Putative Os01g0235200, Description = Putative ovule protein, PFAM = PF13589)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold17831_22729-27208' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold17880_28764-31568' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold17899_13460-35470' '(at5g58005 : 132.0) Cytochrome c oxidase, subunit Vib family protein; FUNCTIONS IN: cytochrome-c oxidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIb (InterPro:IPR003213); Has 136 Blast hits to 136 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 50; Fungi - 38; Plants - 46; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative At5g58005, Description = AT5G58005 protein, PFAM = PF02297)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold17932_21422-24758' '(at3g28857 : 82.0) basic helix-loop-helix (bHLH) DNA-binding family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: regulation of transcription; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding family protein (TAIR:AT5G39860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative PRE5, Description = Transcription factor PRE5, PFAM = PF00010)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold17954_29084-36067' '(at5g63220 : 322.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0363 (InterPro:IPR007317); Has 304 Blast hits to 301 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 121; Plants - 35; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|38234 : 120.0) no description available & (reliability: 644.0) & (original description: Putative At5g63220, Description = At5g63220, PFAM = PF04190)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold17975_10702-18534' '(at2g31190 : 658.0) Encodes RUS2 (root UVB sensitive2), a DUF647-containing protein that is homologous to the RUS1 protein. RUS2 works with RUS1 in a root UV-B sensing pathway that plays a vital role in Arabidopsis early seedling morphogenesis and development. Required for auxin polar transport.; ROOT UV-B SENSITIVE 2 (RUS2); INVOLVED IN: response to UV-B, auxin polar transport; LOCATED IN: mitochondrion, plastid, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT5G49820.1). & (gnl|cdd|68458 : 420.0) no description available & (gnl|cdd|39450 : 390.0) no description available & (reliability: 1316.0) & (original description: Putative RUS2, Description = Protein root UVB sensitive 2, chloroplastic, PFAM = PF04884)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold18000_27337-30690' '(at5g57830 : 114.0) Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT4G30830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68159 : 93.8) no description available & (reliability: 228.0) & (original description: Putative MYOB7, Description = BnaA03g10060D protein, PFAM = PF04576)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold18042_16411-25200' '(at4g38260 : 311.0) Protein of unknown function (DUF833); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF833 (InterPro:IPR008551); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF833) (TAIR:AT1G20680.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86939 : 216.0) no description available & (gnl|cdd|37553 : 190.0) no description available & (reliability: 622.0) & (original description: Putative glysoja_033684, Description = Ser/Thr-rich protein T10 in DGCR region, PFAM = PF05742)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold18053_29654-32401' ' (original description: Putative GTI, Description = Chymotrypsin inhibitor I, A, B and C subunits, PFAM = PF00280)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold18063_32475-35939' '(gnl|cdd|69161 : 207.0) no description available & (at5g49220 : 186.0) Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT4G16100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative At4g16100, Description = At4g16100, PFAM = PF05623)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold18089_11312-13999' '(at2g30395 : 130.0) Member of the plant specific ovate protein family of unknown function.; ovate family protein 17 (OFP17); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06923.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative OFP17, Description = Transcription repressor OFP17, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold18118_16346-31809' '(at3g51980 : 352.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Nucleotide exchange factor Fes1 (InterPro:IPR013918), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1C (TAIR:AT5G02150.1); Has 632 Blast hits to 632 proteins in 203 species: Archae - 0; Bacteria - 3; Metazoa - 254; Fungi - 162; Plants - 146; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|37371 : 172.0) no description available & (reliability: 704.0) & (original description: Putative Sb02g029650, Description = Putative uncharacterized protein Sb02g029650, PFAM = PF08609)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold18118_22886-30255' '(at5g47870 : 213.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: cobalt ion binding (TAIR:AT1G71310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative PGSC0003DMG400027997, Description = At5g47870, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold18148_20712-24745' '(at3g62390 : 547.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 6 (TBL6); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT3G12060.1); Has 1344 Blast hits to 1327 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1344; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 162.0) no description available & (reliability: 1094.0) & (original description: Putative TBL6, Description = Protein trichome birefringence-like 6, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold18166_16977-18577' ' no hits & (original description: Putative orf129a, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold18182_19954-24279' ' no hits & (original description: Putative Agp4, Description = Arabinogalactan protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold18196_1-2285' ' no hits & (original description: Putative , Description = , PFAM = PF00011)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold18196_1481-4382' ' no hits & (original description: Putative , Description = Heavy metal transport/detoxification superfamily protein, putative, PFAM = PF00403)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold18241_11987-14844' '(at1g32690 : 102.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35200.1); Has 45 Blast hits to 45 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold18290_26074-28496' '(at3g52740 : 80.1) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44450.1); Has 65 Blast hits to 65 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold18316_2993-14406' '(at3g10650 : 219.0) BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast hits to 31782 proteins in 2093 species: Archae - 202; Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants - 1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative PGSC0003DMG400023499, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold18332_17667-26218' '(at2g20495 : 245.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Serine-threonine protein kinase 19 (InterPro:IPR018865); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 490.0) & (original description: Putative , Description = Putative serine/threonine-protein kinase 19-like, PFAM = PF10494)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold18356_13239-17843' ' no hits & (original description: Putative PGSC0003DMG400030385, Description = Telomeric repeat binding protein, putative, PFAM = PF00249)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold18414_12674-21956' '(at1g16290 : 544.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Lytic transglycosylase-like, catalytic (InterPro:IPR008258); Has 171 Blast hits to 155 proteins in 40 species: Archae - 0; Bacteria - 54; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 1088.0) & (original description: Putative PGSC0003DMG400022116, Description = At1g16290, PFAM = PF01464)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold18432_15999-25720' '(at5g63540 : 432.0) Encodes RMI1. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates.; RECQ MEDIATED INSTABILITY 1 (RMI1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: meiosis, double-strand break repair via homologous recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, inflorescence meristem, sperm cell, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1767 (InterPro:IPR013894); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF1767) (TAIR:AT5G19950.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 864.0) & (original description: Putative RMI1, Description = RecQ-mediated genome instability protein 1, PFAM = PF16099;PF08585)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold18452_3399-6223' '(at5g62140 : 154.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 60 proteins in 24 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative At5g62140, Description = At5g62140, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold18551_19762-28247' '(at3g51620 : 474.0) PAP/OAS1 substrate-binding domain superfamily; BEST Arabidopsis thaliana protein match is: nucleotidyltransferases (TAIR:AT3G61690.1); Has 386 Blast hits to 356 proteins in 104 species: Archae - 0; Bacteria - 4; Metazoa - 102; Fungi - 40; Plants - 181; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|37117 : 172.0) no description available & (reliability: 948.0) & (original description: Putative BnaC04g47220D, Description = BnaC04g47220D protein, PFAM = PF03828;PF01909)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold18584_28051-33515' '(at5g19855 : 211.0) Chaperonin-like RbcX protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin-like RbcX (InterPro:IPR003435); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative At5g19855, Description = Chaperonin-like RbcX protein, PFAM = PF02341)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold18585_4877-7334' '(at3g63170 : 131.0) Chalcone-flavanone isomerase family protein; FUNCTIONS IN: intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT2G26310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative CHI, Description = CHI protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold18599_33362-35293' ' no hits & (original description: Putative , Description = Phosphatidylinositol-glycan biosynthesis class X protein, putative, PFAM = PF08320)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold18737_1-5428' '(at5g13760 : 619.0) Plasma-membrane choline transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF580 (InterPro:IPR007603); BEST Arabidopsis thaliana protein match is: Plasma-membrane choline transporter family protein (TAIR:AT3G04440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68100 : 240.0) no description available & (gnl|cdd|36576 : 239.0) no description available & (reliability: 1238.0) & (original description: Putative BnaC09g54740D, Description = BnaC09g54740D protein, PFAM = PF04515)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold18865_18107-24732' '(gnl|cdd|72603 : 172.0) no description available & (at3g22680 : 150.0) Encodes RNA-DIRECTED DNA METHYLATION 1 (RDM1), forming a complex with DMS3 (AT3G49250) and DRD1 (AT2G16390). This complex is termed DDR. The DDR complex is required for polymerase V transcripts and RNA-directed DNA methylation.; RNA-DIRECTED DNA METHYLATION 1 (RDM1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1950 (InterPro:IPR015270); Has 26 Blast hits to 26 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative RDM1, Description = Protein RDM1, PFAM = PF09187)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold18938_8552-13741' ' no hits & (original description: Putative PGSC0003DMG400030879, Description = Kinesin-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold19011_14870-27551' ' no hits & (original description: Putative At4g37600, Description = Putative uncharacterized protein AT4g37600, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold19012_1018-4046' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold19065_18904-24066' ' no hits & (original description: Putative xl2, Description = Putative uncharacterized protein xl2, PFAM = PF05251)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold19151_6366-13125' '(at1g21350 : 341.0) Thioredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|48518 : 249.0) no description available & (reliability: 682.0) & (original description: Putative trxA, Description = Thiol-disulfide isomerase or thioredoxin, PFAM = PF08534)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold19175_2249-4750' '(at4g06534 : 86.7) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 22 Blast hits to 22 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative PGSC0003DMG400008008, Description = SPla/RYanodine receptor (SPRY) domain protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold19198_31518-39306' '(at1g36990 : 254.0) unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in 339 species: Archae - 2; Bacteria - 1372; Metazoa - 990; Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes - 1593 (source: NCBI BLink). & (reliability: 508.0) & (original description: Putative TCM_035014, Description = C-jun-amino-terminal kinase-interacting protein 3, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold19292_10230-21544' '(at5g16030 : 184.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative At3g02500, Description = BnaA03g05810D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold19292_22902-32304' '(at5g38690 : 342.0) Zinc-finger domain of monoamine-oxidase A repressor R1 protein; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), DDT domain, subgroup (InterPro:IPR018500), Cell division cycle-associated protein (InterPro:IPR018866); BEST Arabidopsis thaliana protein match is: Zinc-finger domain of monoamine-oxidase A repressor R1 protein (TAIR:AT1G67270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 684.0) & (original description: Putative cdca7, Description = Cell division cycle-associated 7-like protein, PFAM = PF15612;PF10497)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold19344_5276-19469' '(q75ld5|dmi1l_orysa : 462.0) Probable ion channel DMI1-like, chloroplast precursor - Oryza sativa (Rice) & (at5g49960 : 370.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1012 (InterPro:IPR010420); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1012) (TAIR:AT5G02940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 740.0) & (original description: Putative DMI, Description = DMI1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold19345_19144-30625' '(at5g11960 : 423.0) Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 846.0) & (original description: Putative PGSC0003DMG400031356, Description = Probable magnesium transporter, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold19436_1538-9003' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold19474_23308-25511' ' no hits & (original description: Putative PGSC0003DMG402000859, Description = Pectate lyase, PFAM = PF04431)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold19496_6067-21695' '(at5g55820 : 114.0) CONTAINS InterPro DOMAIN/s: Inner centromere protein, ARK-binding region (InterPro:IPR005635); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative F383_15944, Description = Acetate kinase, PFAM = PF03941)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold19566_15088-21020' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold19596_13830-16405' ' no hits & (original description: Putative , Description = , PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold19694_16861-20726' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold19913_30725-33845' ' no hits & (original description: Putative , Description = , PFAM = PF08879)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold19964_1-2193' ' no hits & (original description: Putative SUP, Description = Transcriptional regulator superman protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold19985_13829-24066' '(at3g48380 : 760.0) Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 (InterPro:IPR012462). & (gnl|cdd|37644 : 346.0) no description available & (gnl|cdd|87400 : 242.0) no description available & (reliability: 1520.0) & (original description: Putative ufsp1, Description = Ufm1-specific protease 2, PFAM = PF07910)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold20045_16401-29008' '(at2g46420 : 436.0) Plant protein 1589 of unknown function; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476); BEST Arabidopsis thaliana protein match is: Plant protein 1589 of unknown function (TAIR:AT3G61700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|88257 : 100.0) no description available & (reliability: 872.0) & (original description: Putative BnaA09g39420D, Description = Putative homeobox HD1-like, PFAM = PF09713)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold20088_6484-18850' '(at2g06005 : 394.0) Encodes one of the FRI interacting proteins: FRIGIDA INTERACTING PROTEIN 1 (FIP1)/At2g06005, FIP2/ At4g17060. FRI (At4G00650) is a major determinant of natural variation in Arabidopsis flowering time.; FRIGIDA interacting protein 1 (FIP1); FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G20580.2); Has 283 Blast hits to 279 proteins in 95 species: Archae - 0; Bacteria - 30; Metazoa - 98; Fungi - 20; Plants - 56; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (reliability: 788.0) & (original description: Putative FIP1, Description = Expressed protein, PFAM = PF14802)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold20156_7195-10216' '(gnl|cdd|71235 : 174.0) no description available & (at5g22930 : 135.0) Protein of unknown function (DUF1635); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1635 (InterPro:IPR012862); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1635) (TAIR:AT3G44940.1); Has 97 Blast hits to 97 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative At5g22930, Description = Emb}, PFAM = PF07795)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold20159_24035-26913' '(at5g10750 : 378.0) Protein of unknown function (DUF1336); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT5G24990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70520 : 219.0) no description available & (reliability: 756.0) & (original description: Putative EDR2, Description = Pleckstrin-like (PH) and lipid-binding START domain protein, PFAM = PF07059)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold20163_641-11234' '(at2g32760 : 233.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38107 : 100.0) no description available & (reliability: 466.0) & (original description: Putative At2g32755, Description = At2g32760, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold20206_1815-14129' '(at1g59520 : 276.0) Encodes CW7.; CW7; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2045 (InterPro:IPR019141); Has 145 Blast hits to 144 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 91; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|37676 : 205.0) no description available & (reliability: 552.0) & (original description: Putative T4M14.9, Description = Putative uncharacterized protein T4M14.9, PFAM = PF09741;PF09741)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold20267_1-4432' ' no hits & (original description: Putative PGSC0003DMG400011962, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold20297_1581-30298' '(at1g24706 : 723.0) Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.; THO2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: THO complex, subunitTHOC2, C-region (InterPro:IPR021418), THO complex, subunitTHOC2, N-region (InterPro:IPR021726). & (gnl|cdd|37085 : 495.0) no description available & (reliability: 1446.0) & (original description: Putative THO2, Description = THO complex subunit 2, PFAM = PF16134;PF16134;PF11732)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold20311_3753-6594' ' no hits & (original description: Putative StHRGP, Description = BnaA07g31240D protein, PFAM = PF04554;PF04554;PF04554;PF04554)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold20387_1-1939' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold20442_22026-24472' '(at2g14660 : 181.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0310 (InterPro:IPR002740); Has 2761 Blast hits to 2761 proteins in 686 species: Archae - 5; Bacteria - 1143; Metazoa - 73; Fungi - 78; Plants - 42; Viruses - 0; Other Eukaryotes - 1420 (source: NCBI BLink). & (gnl|cdd|38593 : 162.0) no description available & (gnl|cdd|32770 : 113.0) no description available & (reliability: 362.0) & (original description: Putative Ccrd_004599, Description = EVE domain-containing protein, PFAM = PF01878)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold20445_318-3244' ' no hits & (original description: Putative PGSC0003DMG400035631, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold20460_15772-18428' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold20469_26382-29814' '(at5g27740 : 196.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 2775 (EMB2775); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp-loader complex, subunit E, C-terminal (InterPro:IPR019483), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921); BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA) (TAIR:AT1G21690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37246 : 174.0) no description available & (reliability: 392.0) & (original description: Putative Sb04g030580, Description = Putative uncharacterized protein Sb04g030580, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold20504_5478-14416' '(at4g35920 : 519.0) Encodes an integral plasma membrane protein. Functionally complements the yeast mid1 mutant, a deficiency of Ca2+ influx. Involved in Ca2+ influx and mechanical sensing in roots. An over-expression line showed increased Ca2+ uptake than the wild type plant. The primary root of a knock-out mutant failed to penetrate a harder agar medium from a softer medium.; mid1-complementing activity 1 (MCA1); CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT2G17780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86720 : 91.9) no description available & (reliability: 1038.0) & (original description: Putative MCA2, Description = Mid1-complementing activity 2, PFAM = PF04749)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold20511_19557-21973' ' (original description: Putative Tcs1, Description = Retrotransposon protein, putative, Ty1-copia subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold20528_1-5447' ' no hits & (original description: Putative , Description = SAP-like protein BP-73, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold20853_29600-32812' ' no hits & (original description: Putative , Description = , PFAM = PF00646)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold20864_28358-30465' ' no hits & (original description: Putative GONST5, Description = Nucleotide/sugar transporter family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold21098_12530-17973' ' no hits & (original description: Putative , Description = , PFAM = PF00646)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold21099_851-3731' ' no hits & (original description: Putative , Description = , PFAM = PF03242)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold21142_9552-12995' ' (original description: Putative KK1_023597, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF07727)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold21221_3051-10886' '(at1g80000 : 176.0) CASC3/Barentsz eIF4AIII binding; CONTAINS InterPro DOMAIN/s: CASC3/Barentsz eIF4AIII binding (InterPro:IPR018545); BEST Arabidopsis thaliana protein match is: CASC3/Barentsz eIF4AIII binding (TAIR:AT1G15280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative Os01g0595100, Description = Glycine-rich family protein, PFAM = PF09405)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold21225_9713-15324' '(at5g58220 : 343.0) Encodes a transthyretin-like S-allantoin synthase protein that catalyzes two steps in the allantoin biosynthesis pathway by acting as a hydroxyisourate hydrolase and a 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) decarboxylase. Two alternatively spliced versions of the transcript give rise to a longer peroxisomally-targeted protein (AT5G58220.1 (called TTL1-)) and a slightly shorter cytoplasmic protein (AT5G58220.3 (called TTL2-)). Both have roughly equivalent enzymatic activity in vitro, but, allantoin biosynthesis is believed to occur in the peroxisome suggesting that the cytosolic form may participate in a different process.; transthyretin-like protein (TTL); FUNCTIONS IN: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity, hydroxyisourate hydrolase activity; INVOLVED IN: regulation of cell growth by extracellular stimulus, brassinosteroid mediated signaling pathway, protein homotetramerization; LOCATED IN: cytosol, extrinsic to internal side of plasma membrane, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional hydroxyisourate hydrolase/2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase (InterPro:IPR017129), Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase (InterPro:IPR018020), Hydroxyisourate hydrolase (InterPro:IPR014306), Transthyretin/hydroxyisourate hydrolase (InterPro:IPR000895); Has 3236 Blast hits to 3236 proteins in 817 species: Archae - 6; Bacteria - 1906; Metazoa - 529; Fungi - 103; Plants - 58; Viruses - 0; Other Eukaryotes - 634 (source: NCBI BLink). & (gnl|cdd|38216 : 127.0) no description available & (gnl|cdd|84877 : 127.0) no description available & (reliability: 686.0) & (original description: Putative TTL, Description = Uric acid degradation bifunctional protein TTL, PFAM = PF00576;PF09349)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold21259_22403-27311' '(at1g80860 : 238.0) Encodes a single-copy phospholipid N-methyltransferase, involved in phosphatidylcholine biosynthesis. Has specific activity towards phosphatidylmonomethylethanolamine and phosphatidyldimethylethanolamine, but not phosphatidylethanolamine.; phospholipid N-methyltransferase (PLMT); CONTAINS InterPro DOMAIN/s: Phospholipid methyltransferase (InterPro:IPR007318); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 476.0) & (original description: Putative PLMT, Description = Phosphatidyl-N-methylethanolamine N-methyltransferase, PFAM = PF04191)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold21380_15802-23460' '(at5g56240 : 144.0) INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hapless 8 (TAIR:AT5G56250.1). & (reliability: 288.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold21420_137-6364' '(at2g32500 : 286.0) Stress responsive alpha-beta barrel domain protein; CONTAINS InterPro DOMAIN/s: Stress responsive alpha-beta barrel (InterPro:IPR013097), Dimeric alpha-beta barrel (InterPro:IPR011008); BEST Arabidopsis thaliana protein match is: Stress responsive alpha-beta barrel domain protein (TAIR:AT2G31670.1); Has 68 Blast hits to 66 proteins in 17 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 572.0) & (original description: Putative , Description = , PFAM = PF07876)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold21420_771-5454' '(at2g32500 : 221.0) Stress responsive alpha-beta barrel domain protein; CONTAINS InterPro DOMAIN/s: Stress responsive alpha-beta barrel (InterPro:IPR013097), Dimeric alpha-beta barrel (InterPro:IPR011008); BEST Arabidopsis thaliana protein match is: Stress responsive alpha-beta barrel domain protein (TAIR:AT2G31670.1); Has 68 Blast hits to 66 proteins in 17 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative , Description = , PFAM = PF07876)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold21440_20429-31921' '(at4g04330 : 139.0) Chaperonin-like RbcX protein; CONTAINS InterPro DOMAIN/s: Chaperonin-like RbcX (InterPro:IPR003435); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative MTR_2g024300, Description = Chaperonin-like RbcX protein, PFAM = PF02341)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold21446_1-5906' '(gnl|cdd|69860 : 210.0) no description available & (at1g05070 : 179.0) Protein of unknown function (DUF1068); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1068 (InterPro:IPR010471); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1068) (TAIR:AT2G32580.1); Has 119 Blast hits to 119 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 116; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|37034 : 137.0) no description available & (reliability: 358.0) & (original description: Putative At1g05070, Description = At1g05070/T7A14_6, PFAM = PF06364)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold21516_4383-23174' ' no hits & (original description: Putative , Description = , PFAM = PF00240)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold21531_1-8260' '(at5g19950 : 127.0) CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1767 (InterPro:IPR013894); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF1767) (TAIR:AT5G63540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative At5g19950, Description = AT5G19950 protein, PFAM = PF08585;PF08585)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold21572_27468-32076' '(at2g32320 : 155.0) tRNAHis guanylyltransferase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: tRNAHis guanylyltransferase (InterPro:IPR007537); BEST Arabidopsis thaliana protein match is: tRNAHis guanylyltransferase (TAIR:AT2G31580.1); Has 883 Blast hits to 462 proteins in 224 species: Archae - 94; Bacteria - 87; Metazoa - 268; Fungi - 254; Plants - 79; Viruses - 2; Other Eukaryotes - 99 (source: NCBI BLink). & (gnl|cdd|37932 : 154.0) no description available & (gnl|cdd|68035 : 113.0) no description available & (reliability: 310.0) & (original description: Putative ICA1, Description = Putative tRNA(His) guanylyltransferase, PFAM = PF04446;PF14413)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold21606_24888-29903' '(at1g47420 : 258.0) succinate dehydrogenase 5 (SDH5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 2 (TAIR:AT1G47260.1); Has 145 Blast hits to 145 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 516.0) & (original description: Putative SDH5, Description = Succinate dehydrogenase subunit 5, mitochondrial, PFAM = PF14290)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold21653_22065-31122' '(at5g12230 : 104.0) MED19A; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19480.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative MED19B, Description = Probable mediator of RNA polymerase II transcription subunit 19b, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold21661_1-5859' '(at3g57570 : 283.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024). & (reliability: 566.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold21676_40-6677' '(at5g51510 : 120.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1352 (InterPro:IPR009787); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39257 : 84.2) no description available & (reliability: 240.0) & (original description: Putative HrCDT2, Description = Putative uncharacterized protein HrCDT2, PFAM = PF07086)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold21705_13823-29758' '(at4g31880 : 219.0) LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1). & (gnl|cdd|36738 : 135.0) no description available & (reliability: 438.0) & (original description: Putative At1g15940, Description = Aspartyl beta-hydroxylase N-terminal region domain-containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold21747_18778-24189' '(at1g69360 : 269.0) Plant protein of unknown function (DUF863); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF863, plant (InterPro:IPR008581); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G26620.1); Has 257 Blast hits to 226 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2; Plants - 245; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|69429 : 171.0) no description available & (reliability: 538.0) & (original description: Putative , Description = , PFAM = PF05904;PF05904)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold21757_7363-10289' '(at3g14260 : 157.0) Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT1G53890.1); Has 295 Blast hits to 292 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86676 : 140.0) no description available & (reliability: 314.0) & (original description: Putative At3g14260, Description = Protein LURP-one-related 11, PFAM = PF04525)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold21785_3688-21258' '(at1g09980 : 932.0) Putative serine esterase family protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3657 (InterPro:IPR022122), Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: Putative serine esterase family protein (TAIR:AT1G58350.2); Has 481 Blast hits to 386 proteins in 96 species: Archae - 0; Bacteria - 0; Metazoa - 284; Fungi - 2; Plants - 83; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|37416 : 354.0) no description available & (gnl|cdd|68625 : 150.0) no description available & (reliability: 1864.0) & (original description: Putative ZW18, Description = F19C14.4 protein, PFAM = PF05057;PF12394)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold21812_13687-30073' '(at4g14970 : 879.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; Has 257 Blast hits to 164 proteins in 70 species: Archae - 0; Bacteria - 4; Metazoa - 189; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|39910 : 411.0) no description available & (reliability: 1758.0) & (original description: Putative Os07g0154400, Description = Os07g0154400 protein, PFAM = PF14631)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold21823_13434-15945' ' (original description: Putative LgRT3, Description = Reverse transcriptases, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold21903_185-2595' ' no hits & (original description: Putative , Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold21958_1-4269' '(at5g54890 : 463.0) RNA-binding CRS1 / YhbY (CRM) domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, C globular stage, F mature embryo stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain-containing protein (TAIR:AT4G31010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85815 : 89.4) no description available & (reliability: 926.0) & (original description: Putative At5g54890, Description = CRS2-associated factor 2, mitochondrial, PFAM = PF01985;PF01985)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold21980_23154-27350' '(at2g23790 : 327.0) Protein of unknown function (DUF607); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF607 (InterPro:IPR006769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF607) (TAIR:AT4G36820.1); Has 364 Blast hits to 364 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 147; Fungi - 45; Plants - 131; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|38177 : 285.0) no description available & (gnl|cdd|68256 : 227.0) no description available & (reliability: 654.0) & (original description: Putative At2g23790, Description = Calcium uniporter protein 2, mitochondrial, PFAM = PF04678)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold22006_9563-19755' '(at1g64150 : 274.0) Uncharacterized protein family (UPF0016); LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0016 (InterPro:IPR001727); BEST Arabidopsis thaliana protein match is: Uncharacterized protein family (UPF0016) (TAIR:AT4G13590.1); Has 1632 Blast hits to 1475 proteins in 546 species: Archae - 26; Bacteria - 846; Metazoa - 163; Fungi - 173; Plants - 204; Viruses - 0; Other Eukaryotes - 220 (source: NCBI BLink). & (gnl|cdd|38092 : 140.0) no description available & (gnl|cdd|32302 : 103.0) no description available & (reliability: 548.0) & (original description: Putative At1g64150, Description = GDT1-like protein 1, chloroplastic, PFAM = PF01169;PF01169)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold22016_1-2846' '(gnl|cdd|68624 : 114.0) no description available & (at5g01130 : 105.0) Protein of unknown function (DUF674); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF674 (InterPro:IPR007750); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF674) (TAIR:AT5G01150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative , Description = Translation initiation factor IF-2, putative, PFAM = PF05056)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold22127_8380-21261' '(at5g25070 : 283.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 566.0) & (original description: Putative BnaA05g06060D, Description = BnaA05g06060D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold22133_1-2444' '(at2g16460 : 116.0) Protein of unknown function (DUF1640); FUNCTIONS IN: metal ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1640 (InterPro:IPR012439); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1640) (TAIR:AT3G51090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38366 : 95.8) no description available & (reliability: 232.0) & (original description: Putative At2g16460, Description = FMP32-like protein, PFAM = PF07798)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold22133_1470-7348' '(at3g51100 : 160.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative , Description = Ferulic acid 5-hydroxylase 1, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold22348_13374-15820' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold22454_27339-29431' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold22577_1879-4370' ' no hits & (original description: Putative glysoja_030340, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold22634_28849-31038' ' no hits & (original description: Putative , Description = Cytochrome P450, family 722, subfamily A, polypeptide 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold22663_1984-4686' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold22664_13254-31033' '(at5g52800 : 626.0) DNA primases; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DNA primase, UL52/UL70 type, Herpesviridae (InterPro:IPR004340); Has 201 Blast hits to 173 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 82; Fungi - 0; Plants - 45; Viruses - 8; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 1252.0) & (original description: Putative At5g52800, Description = DNA primase, PFAM = PF03121)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold22684_19115-27872' ' no hits & (original description: Putative PGSC0003DMG401027501, Description = Putative suppressor protein SRP40-like, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold22711_20781-25607' '(at2g34510 : 556.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF642 (TAIR:AT1G29980.1); Has 305 Blast hits to 265 proteins in 22 species: Archae - 0; Bacteria - 13; Metazoa - 0; Fungi - 0; Plants - 292; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68437 : 475.0) no description available & (reliability: 1112.0) & (original description: Putative BnaC04g10730D, Description = BnaC04g10730D protein, PFAM = PF04862;PF04862)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold22729_2242-5864' '(at5g21940 : 92.4) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative At3g43850, Description = Putative uncharacterized protein T28A8_140, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold22755_7667-11202' ' no hits & (original description: Putative PGSC0003DMG400020863, Description = , PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold22935_4041-6315' '(at2g26110 : 90.9) Protein of unknown function (DUF761); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G56980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative PGSC0003DMG400035559, Description = AT4g26130/F20B18_240, PFAM = PF05553;PF14364)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold23084_4190-12024' ' (original description: Putative vib, Description = MIP08680p, PFAM = PF02121)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold23092_4751-6833' '(at2g04039 : 176.0) unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 38 Blast hits to 38 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative PGSC0003DMG400020288, Description = DUF2996 family protein, PFAM = PF11210)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold23092_6012-17880' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold23107_21728-28797' '(at3g48710 : 202.0) DEK domain-containing chromatin associated protein; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: DEK domain-containing chromatin associated protein (TAIR:AT5G63550.2); Has 53243 Blast hits to 30328 proteins in 1615 species: Archae - 67; Bacteria - 9231; Metazoa - 21090; Fungi - 5394; Plants - 2191; Viruses - 327; Other Eukaryotes - 14943 (source: NCBI BLink). & (gnl|cdd|37477 : 105.0) no description available & (reliability: 404.0) & (original description: Putative Os01g0924900, Description = Os01g0924900 protein, PFAM = PF08766)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold23145_814-7438' '(at2g21870 : 265.0) MALE GAMETOPHYTE DEFECTIVE 1 (MGP1); FUNCTIONS IN: copper ion binding, cobalt ion binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, nucleolus, chloroplast, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; Has 56 Blast hits to 56 proteins in 21 species: Archae - 2; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 530.0) & (original description: Putative mgp1, Description = Male gametophyte defective 1, PFAM = PF15704)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold23180_6432-27519' '(at5g58450 : 569.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: N-acetyltransferase B complex, non-catalytic subunit (InterPro:IPR019183), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37264 : 287.0) no description available & (reliability: 1138.0) & (original description: Putative At5g58450, Description = Tetratricopeptide repeat-containing protein, PFAM = PF09797)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold23203_20749-25372' '(at2g40095 : 178.0) Alpha/beta hydrolase related protein; CONTAINS InterPro DOMAIN/s: MENTAL domain (InterPro:IPR019498); BEST Arabidopsis thaliana protein match is: Alpha/beta hydrolase related protein (TAIR:AT3G55880.2); Has 87 Blast hits to 87 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative At2g40095, Description = Alpha/beta hydrolase related protein, PFAM = PF10457)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold23211_16637-21434' '(at1g47980 : 378.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62730.1); Has 169 Blast hits to 169 proteins in 41 species: Archae - 0; Bacteria - 68; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 756.0) & (original description: Putative At1g47980, Description = Desiccation-related protein PCC13-62, PFAM = PF13668)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold23395_49238-51591' ' no hits & (original description: Putative MTR_2g081155, Description = Wound-responsive family protein, PFAM = PF12609)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold23429_1090-10375' '(at1g48360 : 141.0) zinc ion binding;nucleic acid binding;hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HIP116, Rad5p N-terminal (InterPro:IPR014905); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative At1g48360, Description = Putative ovule protein, PFAM = PF08797)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold23510_8739-13888' '(at5g19855 : 166.0) Chaperonin-like RbcX protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin-like RbcX (InterPro:IPR003435); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative At5g19855, Description = Chaperonin-like RbcX protein, PFAM = PF02341)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold23512_424-3398' ' (original description: Putative m14, Description = MIKC* MADS-box transcription factor, PFAM = PF00319)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold23528_14507-20776' '(at1g01730 : 91.3) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 1; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold23671_2276-4872' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold23752_7113-9355' ' no hits & (original description: Putative , Description = , PFAM = PF08137)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold23769_1558-15879' '(at1g73470 : 326.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 652.0) & (original description: Putative Sb02g026190, Description = Putative uncharacterized protein Sb02g026190, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold23773_24441-29005' ' no hits & (original description: Putative PGSC0003DMG400011051, Description = BnaA04g21320D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold23780_1208-6467' ' no hits & (original description: Putative , Description = , PFAM = PF02042)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold23799_13161-17123' '(at1g76980 : 105.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1); Has 61 Blast hits to 61 proteins in 18 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 2; Plants - 40; Viruses - 3; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold23864_24987-29970' '(gnl|cdd|70188 : 172.0) no description available & (at4g36660 : 150.0) Protein of unknown function (DUF1195); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1195 (InterPro:IPR010608); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1195) (TAIR:AT5G65650.1); Has 67 Blast hits to 67 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative At1g19380, Description = Sugar transporter, putative, PFAM = PF06708)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold23911_594-13122' '(at4g38360 : 726.0) Protein of unknown function (DUF300); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT1G77220.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67249 : 331.0) no description available & (gnl|cdd|37852 : 309.0) no description available & (reliability: 1452.0) & (original description: Putative LAZ1, Description = Protein LAZ1, PFAM = PF03619)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold23931_17085-22902' '(at1g70630 : 533.0) Nucleotide-diphospho-sugar transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: xyloglucanase 113 (TAIR:AT2G35610.1); Has 427 Blast hits to 427 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 379; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 1066.0) & (original description: Putative RAY1, Description = UDP-galactose:fucoside alpha-3-galactosyltransferase, PFAM = PF03407)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold23931_17725-22049' '(at1g70630 : 587.0) Nucleotide-diphospho-sugar transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: xyloglucanase 113 (TAIR:AT2G35610.1); Has 427 Blast hits to 427 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 379; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 1174.0) & (original description: Putative RAY1, Description = Beta-arabinofuranosyltransferase RAY1, PFAM = PF03407)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold24037_14605-18285' ' no hits & (original description: Putative PGSC0003DMG400020166, Description = Putative G3BP-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold24039_11797-19110' '(at4g33140 : 313.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: phosphatase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 5'(3')-deoxyribonucleotidase (InterPro:IPR010708); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 626.0) & (original description: Putative At4g33140, Description = Putative ovule protein, PFAM = PF06941)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold24068_17748-29806' '(at4g17010 : 121.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative At4g17010, Description = AT4g17010/dl4535w, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold24088_16511-20093' '(gnl|cdd|68298 : 189.0) no description available & (at1g12030 : 165.0) Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT1G62420.1); Has 393 Blast hits to 391 proteins in 26 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 387; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 330.0) & (original description: Putative glysoja_028213, Description = , PFAM = PF04720)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold24103_12488-29766' '(at3g51650 : 496.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51640.1); Has 27645 Blast hits to 15097 proteins in 1246 species: Archae - 44; Bacteria - 3367; Metazoa - 10036; Fungi - 2690; Plants - 1205; Viruses - 196; Other Eukaryotes - 10107 (source: NCBI BLink). & (reliability: 992.0) & (original description: Putative BnaA09g32170D, Description = BnaA09g32170D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold24158_5898-17162' '(at3g22270 : 699.0) Topoisomerase II-associated protein PAT1; BEST Arabidopsis thaliana protein match is: Topoisomerase II-associated protein PAT1 (TAIR:AT4G14990.1); Has 263 Blast hits to 260 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 98; Fungi - 15; Plants - 121; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (reliability: 1398.0) & (original description: Putative At4g14990, Description = Putative uncharacterized protein At4g14990, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold24171_11321-29704' '(at5g54440 : 1675.0) Encodes a putative TRAPPII tethering factor required for cell plate assembly during cytokinesis.; CLUB (CLUB); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3758 (InterPro:IPR022233); Has 362 Blast hits to 266 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 146; Fungi - 118; Plants - 63; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|37142 : 715.0) no description available & (reliability: 3350.0) & (original description: Putative TRS130, Description = Trafficking protein particle complex II-specific subunit 130 homolog, PFAM = PF12584;PF11817)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold24222_13134-20464' '(at1g78810 : 100.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative glysoja_038102, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold24252_765-9737' '(at1g09280 : 482.0) CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits to 5912 proteins in 1592 species: Archae - 0; Bacteria - 2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses - 0; Other Eukaryotes - 2186 (source: NCBI BLink). & (gnl|cdd|80545 : 220.0) no description available & (reliability: 964.0) & (original description: Putative AM587_10012363, Description = Thiosulfate sulfurtransferase/rhodanese domain-containing protein 2, PFAM = PF12368)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold24252_802-10912' '(at1g09280 : 792.0) CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits to 5912 proteins in 1592 species: Archae - 0; Bacteria - 2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses - 0; Other Eukaryotes - 2186 (source: NCBI BLink). & (gnl|cdd|80545 : 220.0) no description available & (gnl|cdd|37762 : 190.0) no description available & (reliability: 1584.0) & (original description: Putative glysoja_012023, Description = Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2, PFAM = PF03959;PF12368)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold24276_4119-13325' ' no hits & (original description: Putative Os05g0301600, Description = Os05g0301600 protein, PFAM = PF04979)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold24371_23253-27718' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold24387_9173-12204' '(gnl|cdd|69434 : 161.0) no description available & (at5g28150 : 116.0) Plant protein of unknown function (DUF868); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT3G04860.1); Has 292 Blast hits to 290 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 292; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative TCM_026400, Description = Sulfate/thiosulfate import ATP-binding protein cysA, PFAM = PF05910)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold24455_2654-6376' ' (original description: Putative Sn, Description = Antimicrobial peptide snakin, PFAM = PF02704)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold24463_8717-27254' ' no hits & (original description: Putative PGSC0003DMG400003059, Description = Putative ovule protein, PFAM = PF01429;PF01429;PF01429)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold24477_8159-11425' ' no hits & (original description: Putative OMT3, Description = O-methyltransferase ZRP4, PFAM = PF08100;PF00891)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold24586_1-1887' ' no hits & (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold24664_19598-27977' '(at1g50710 : 503.0) unknown protein; Has 109 Blast hits to 109 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 61; Fungi - 8; Plants - 36; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 1006.0) & (original description: Putative 38200, Description = AUGMIN subunit 4, PFAM = PF14735)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold24687_7851-11593' '(at3g15095 : 104.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative At3g15100, Description = Putative uncharacterized protein At3g15100, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold24752_16117-18467' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold24915_10537-13357' ' (original description: Putative , Description = , PFAM = PF10551;PF03108)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold24964_19156-27588' '(at1g01770 : 783.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1446 (InterPro:IPR010839); Has 1597 Blast hits to 1509 proteins in 306 species: Archae - 4; Bacteria - 843; Metazoa - 22; Fungi - 131; Plants - 31; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink). & (gnl|cdd|70740 : 356.0) no description available & (reliability: 1566.0) & (original description: Putative , Description = , PFAM = PF07287)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold24989_1-3889' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold25009_3746-8862' '(at3g01370 : 219.0) Encodes a protein containing a CRM domain that is involved in group I and group II intron splicing.; CRM family member 2 (CFM2); FUNCTIONS IN: RNA binding; INVOLVED IN: Group I intron splicing, Group II intron splicing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: CRM family member 3B (TAIR:AT4G14510.1); Has 1269 Blast hits to 881 proteins in 154 species: Archae - 0; Bacteria - 46; Metazoa - 247; Fungi - 72; Plants - 683; Viruses - 4; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|37201 : 139.0) no description available & (gnl|cdd|85815 : 96.0) no description available & (reliability: 438.0) & (original description: Putative CFM2, Description = Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic, PFAM = PF01985)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold25028_3523-6266' '(gnl|cdd|70773 : 114.0) no description available & (at2g27260 : 92.8) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G52460.1); Has 868 Blast hits to 868 proteins in 31 species: Archae - 2; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 862; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 185.6) & (original description: Putative PGSC0003DMG400005897, Description = Late embryogenesis abundant protein, LEA-14, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold25198_11203-16447' '(at3g63270 : 486.0) CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: PIF / Ping-Pong family of plant transposases (TAIR:AT3G55350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39785 : 181.0) no description available & (reliability: 972.0) & (original description: Putative At3g63270, Description = Putative uncharacterized protein At3g63270, PFAM = PF13359)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold25282_25805-28110' '(at5g24860 : 127.0) encodes a small protein of 12.6 kDa that regulates flowering and is involved in gibberellin signalling pathway. It is expressed in apical meristems immediately after the photoperiodic induction of flowering. Genetic interactions with flowering time and floral organ identity genes suggest that this gene may be involved in modulating the competence to flower. There are two other genes similar to FPF1, FLP1 (At4g31380) and FLP2 (no locus name yet, on BAC F8F16 on chr 4). This is so far a plant-specific gene and is only found in long-day mustard, arabidopsis, and rice.; FLOWERING PROMOTING FACTOR 1 (FPF1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to gibberellin stimulus, positive regulation of flower development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10625.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative RAA1, Description = Flowering-promoting factor 1-like protein 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold25287_489-5703' '(at2g28150 : 438.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF966 (InterPro:IPR010369), Uncharacterised conserved protein UCP031043 (InterPro:IPR021182); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF966) (TAIR:AT5G59790.1); Has 2510 Blast hits to 686 proteins in 184 species: Archae - 0; Bacteria - 433; Metazoa - 315; Fungi - 216; Plants - 186; Viruses - 4; Other Eukaryotes - 1356 (source: NCBI BLink). & (gnl|cdd|69644 : 330.0) no description available & (reliability: 876.0) & (original description: Putative At2g28150, Description = Putative uncharacterized protein At2g28150, PFAM = PF06136)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold25323_1-2845' '(at1g26650 : 358.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69430.1); Has 205 Blast hits to 204 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 716.0) & (original description: Putative BnaC05g20180D, Description = BnaC05g20180D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold25333_16892-26813' '(q5h8a6|casto_lotja : 459.0) Putative ion channel CASTOR, chloroplast precursor - Lotus japonicus & (at5g49960 : 374.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1012 (InterPro:IPR010420); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1012) (TAIR:AT5G02940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 748.0) & (original description: Putative DMI, Description = DMI1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold25371_23907-26095' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold25395_10920-13734' ' (original description: Putative ap2, Description = Ethylene-responsive transcription factor ERF098 family, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold25454_1-2322' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold25519_26445-28506' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold25591_5103-14589' '(at5g17910 : 199.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29620.1). & (reliability: 398.0) & (original description: Putative At2g29620, Description = BnaA05g12420D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold25630_17842-25770' '(at3g07565 : 177.0) Protein of unknown function (DUF3755); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3755 (InterPro:IPR022228); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3755) (TAIR:AT1G10820.2). & (reliability: 354.0) & (original description: Putative DRIF2, Description = DIV and RAD interacting factor 2, PFAM = PF12579)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold25872_8720-11818' '(q56s59|phyll_tobac : 96.7) Phylloplanin precursor (T-phylloplanin) - Nicotiana tabacum (Common tobacco) & (at3g16660 : 85.5) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT3G16670.1); Has 273 Blast hits to 210 proteins in 63 species: Archae - 0; Bacteria - 149; Metazoa - 42; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative At3g16670, Description = Phylloplanin, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold25939_26341-28152' '(at4g23890 : 143.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3252 (InterPro:IPR021659); Has 287 Blast hits to 287 proteins in 81 species: Archae - 0; Bacteria - 118; Metazoa - 12; Fungi - 6; Plants - 40; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative ndhS, Description = BnaCnng71720D protein, PFAM = PF11623)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold25949_1590-7369' '(at5g51040 : 173.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF339 (InterPro:IPR005631). & (gnl|cdd|38536 : 112.0) no description available & (reliability: 346.0) & (original description: Putative SDHAF2, Description = (+)-neomenthol dehydrogenase, PFAM = PF03937)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold26062_341-4510' '(at1g28710 : 334.0) Nucleotide-diphospho-sugar transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT1G28700.1). & (reliability: 668.0) & (original description: Putative At1g28695, Description = Uncharacterized protein At1g28695, PFAM = PF03407)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold26124_9474-18379' '(at1g27100 : 457.0) Actin cross-linking protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF569 (InterPro:IPR007679), Actin cross-linking (InterPro:IPR008999); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF569) (TAIR:AT1G69890.1); Has 362 Blast hits to 223 proteins in 29 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 10; Plants - 341; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|68182 : 252.0) no description available & (reliability: 914.0) & (original description: Putative At1g27100, Description = Actin cross-linking protein, PFAM = PF04601;PF04601)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold26256_15439-20458' '(at5g15900 : 447.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 19 (TBL19); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 21 (TAIR:AT5G15890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|72785 : 118.0) no description available & (reliability: 894.0) & (original description: Putative AXY4L, Description = Leaf senescence protein-like, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold26268_10652-16610' ' no hits & (original description: Putative At5g63135, Description = At5g63135, PFAM = PF15243)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold26290_20672-26353' '(at4g27500 : 347.0) interacts with H+-ATPase, and regulates its activity; proton pump interactor 1 (PPI1); FUNCTIONS IN: protein binding; INVOLVED IN: regulation of proton transport; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36690.1); Has 56187 Blast hits to 35171 proteins in 2461 species: Archae - 533; Bacteria - 11472; Metazoa - 20772; Fungi - 6196; Plants - 2564; Viruses - 257; Other Eukaryotes - 14393 (source: NCBI BLink). & (reliability: 694.0) & (original description: Putative PPI1, Description = Proton pump-interactor 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold26305_7085-9522' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold26351_1-5517' '(at4g29400 : 344.0) Protein of unknown function (DUF3531); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3531 (InterPro:IPR021920); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3531) (TAIR:AT5G08400.2); Has 315 Blast hits to 315 proteins in 83 species: Archae - 0; Bacteria - 120; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 688.0) & (original description: Putative F383_09136, Description = Dna-directed rna polymerase i subunit rpa2, PFAM = PF12049)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold26390_13485-19530' ' (original description: Putative Ccrd_013734, Description = Phosphatidylinositol transfer protein, PFAM = PF02121)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold26662_11491-17493' '(at4g10430 : 433.0) TMPIT-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: TMPIT-like (InterPro:IPR012926); BEST Arabidopsis thaliana protein match is: TMPIT-like protein (TAIR:AT1G33230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39955 : 143.0) no description available & (gnl|cdd|87386 : 125.0) no description available & (reliability: 866.0) & (original description: Putative TMPIT1, Description = TMPIT1, PFAM = PF07851)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold26703_1-3192' '(at5g62440 : 167.0) Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division.; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: nucleologenesis, regulation of cell division, embryo development; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3223 (InterPro:IPR021602); Has 1122 Blast hits to 800 proteins in 144 species: Archae - 2; Bacteria - 150; Metazoa - 333; Fungi - 187; Plants - 279; Viruses - 3; Other Eukaryotes - 168 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative EMB514, Description = EMB514, PFAM = PF11523)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold26725_1770-4081' ' no hits & (original description: Putative orf104c, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold26850_21069-27384' '(at1g48880 : 539.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 7 (TBL7); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT3G06080.2); Has 1333 Blast hits to 1318 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 1329; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 130.0) no description available & (reliability: 1078.0) & (original description: Putative TBL7, Description = Protein trichome berefringence-like 7, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold26877_3413-10822' '(at1g64680 : 306.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits to 146 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 612.0) & (original description: Putative At1g64680, Description = At1g64680, PFAM = PF13225)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold26901_11271-15020' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold27044_14901-21592' '(at2g37210 : 388.0) Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At5g11950.; lysine decarboxylase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: Putative lysine decarboxylase family protein (TAIR:AT3G53450.1). & (gnl|cdd|86394 : 196.0) no description available & (reliability: 776.0) & (original description: Putative LOGL10, Description = Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10, PFAM = PF03641)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold27196_5327-7649' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold27219_15395-18353' '(at1g25370 : 116.0) Protein of unknown function (DUF1639); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1639 (InterPro:IPR012438); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1639) (TAIR:AT1G68340.1); Has 265 Blast hits to 265 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 264; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87373 : 82.2) no description available & (reliability: 232.0) & (original description: Putative , Description = , PFAM = PF07797)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold27270_7267-19717' '(at4g24840 : 906.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein transport, Golgi organization; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: COG complex component, COG2 (InterPro:IPR009316); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69655 : 659.0) no description available & (gnl|cdd|37518 : 615.0) no description available & (reliability: 1812.0) & (original description: Putative BnaC07g39160D, Description = BnaC07g39160D protein, PFAM = PF12022;PF06148)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold27294_20057-25469' '(at5g62960 : 272.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 544.0) & (original description: Putative BnaA02g14930D, Description = BnaA02g14930D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold27346_12759-17434' '(at1g47740 : 350.0) PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT5G25170.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35545 : 225.0) no description available & (gnl|cdd|69428 : 166.0) no description available & (reliability: 700.0) & (original description: Putative dl4780c, Description = At5g25170, PFAM = PF05903)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold27393_15589-18815' ' no hits & (original description: Putative PGSC0003DMG400024151, Description = Transmembrane protein, putative, PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold27412_1678-4988' '(at4g02725 : 136.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; Has 107 Blast hits to 107 proteins in 55 species: Archae - 0; Bacteria - 69; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative At4g02725, Description = At4g02725, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold27423_20938-31032' '(at1g60460 : 316.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 632.0) & (original description: Putative , Description = Putative L-type lectin-domain containing receptor kinase V.2-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold27483_5833-11570' '(at4g13030 : 239.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 478.0) & (original description: Putative BnaA08g04930D, Description = BnaA08g04930D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold27517_15494-25311' '(at4g00026 : 266.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim21 (InterPro:IPR013261); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|71727 : 81.8) no description available & (reliability: 532.0) & (original description: Putative TIM21, Description = Probable mitochondrial import inner membrane translocase subunit TIM21, PFAM = PF08294)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold27570_21177-25973' ' no hits & (original description: Putative Sb01g015010, Description = Putative uncharacterized protein Sb01g015010, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold27582_16206-25098' '(gnl|cdd|70178 : 218.0) no description available & (at4g01140 : 132.0) Protein of unknown function (DUF1191); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, leaf whorl, root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1191 (InterPro:IPR010605); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1191) (TAIR:AT4G23720.1); Has 115 Blast hits to 115 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative PGSC0003DMG400000087, Description = Atpob1, putative, PFAM = PF06697)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold27591_3877-9297' '(at3g49590 : 203.0) Autophagy-related protein 13; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 13 (InterPro:IPR018731); BEST Arabidopsis thaliana protein match is: Autophagy-related protein 13 (TAIR:AT3G18770.1). & (gnl|cdd|39773 : 162.0) no description available & (reliability: 406.0) & (original description: Putative BnaA06g21120D, Description = BnaA06g21120D protein, PFAM = PF10033)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold27660_9905-12216' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold27698_5462-8331' ' no hits & (original description: Putative LOC100272952, Description = Kinase family protein / peptidoglycan-binding LysM domain-containing protein, PFAM = PF01476)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold27704_7445-17045' '(at2g41990 : 197.0) CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT4G35170.1); Has 172 Blast hits to 168 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative At2g41990, Description = At2g41990, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold27713_6154-18638' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold27720_14373-17312' ' no hits & (original description: Putative , Description = , PFAM = PF17232)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold27769_192-4334' '(at3g19220 : 192.0) Encodes a zinc finger protein that is similar to a subgroup of DnaJ and is involved in cotyledon chloroplast biogenesis. Cyo1 is localized to the thylakoid membrane and has protein disulfide isomerase activity in vivo.Cyo1 is more highly expressed in light grown seedlings. Loss of function mutants have albino cotyledons and abnormal plastids.; SNOWY COTYLEDON 2 (SCO2); Has 34 Blast hits to 34 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative SCO2, Description = Protein disulfide-isomerase SCO2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold27885_29-26682' '(at3g62360 : 1409.0) Carbohydrate-binding-like fold; FUNCTIONS IN: carbohydrate binding; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate-binding-like fold (InterPro:IPR013784); Has 321 Blast hits to 256 proteins in 98 species: Archae - 6; Bacteria - 117; Metazoa - 138; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|37159 : 1037.0) no description available & (reliability: 2818.0) & (original description: Putative BnaC08g32180D, Description = BnaC08g32180D protein, PFAM = PF13620;PF13620)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold27892_1-7821' '(at1g35220 : 858.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 313 Blast hits to 185 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 200; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|38911 : 430.0) no description available & (reliability: 1716.0) & (original description: Putative nfc102, Description = WD repeat-containing protein RBAP1, PFAM = PF14647;PF14648;PF14648)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold28011_12035-25493' '(at5g25070 : 265.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 530.0) & (original description: Putative BnaA05g06060D, Description = BnaA05g06060D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold28046_19561-22579' ' no hits & (original description: Putative PGSC0003DMG400016538, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold28125_24745-33254' '(at5g04460 : 491.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Ring/U-Box superfamily protein (TAIR:AT2G27950.1). & (reliability: 982.0) & (original description: Putative At5g04460, Description = RING/U-box domain-containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold28154_8726-15769' '(gnl|cdd|70188 : 229.0) no description available & (at4g36660 : 199.0) Protein of unknown function (DUF1195); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1195 (InterPro:IPR010608); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1195) (TAIR:AT5G65650.1); Has 67 Blast hits to 67 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative At4g36660, Description = At4g36660, PFAM = PF06708)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold28206_828-3877' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold28232_21668-26419' '(at4g24200 : 149.0) Transcription elongation factor (TFIIS) family protein; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923); Has 1174 Blast hits to 562 proteins in 174 species: Archae - 0; Bacteria - 342; Metazoa - 163; Fungi - 176; Plants - 109; Viruses - 0; Other Eukaryotes - 384 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative PGSC0003DMG400029336, Description = BnaC07g38790D protein, PFAM = PF08711)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold28236_23817-26414' '(at1g10522 : 193.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 386.0) & (original description: Putative At1g10522, Description = At1g10522, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold28431_21228-26281' '(at5g01350 : 82.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative PGSC0003DMG400011024, Description = BnaC03g00310D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold28516_15166-21116' '(at4g30850 : 299.0) heptahelical transmembrane protein homologous to human adiponectin receptors and progestin receptors; heptahelical transmembrane protein2 (HHP2); FUNCTIONS IN: receptor activity; INVOLVED IN: response to hormone stimulus, response to sucrose stimulus; LOCATED IN: integral to membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Hly-III related (InterPro:IPR004254); BEST Arabidopsis thaliana protein match is: heptahelical protein 3 (TAIR:AT2G24150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35967 : 213.0) no description available & (gnl|cdd|86213 : 113.0) no description available & (reliability: 598.0) & (original description: Putative HHP2, Description = Heptahelical transmembrane protein 2, PFAM = PF03006)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold28518_24884-26208' ' no hits & (original description: Putative DVL19, Description = DVL19, PFAM = PF08137)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold28528_19454-22907' '(at5g23395 : 87.4) Cox19-like CHCH family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative CHP, Description = Cox19-like CHCH family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold28665_16623-19312' '(at1g67035 : 90.5) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38300.1). & (reliability: 181.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold28729_23388-25771' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold28758_13197-16213' '(gnl|cdd|71240 : 186.0) no description available & (at3g24740 : 175.0) Protein of unknown function (DUF1644); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1644) (TAIR:AT1G68140.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative BnaA02g27710D, Description = BnaA02g27710D protein, PFAM = PF07800)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold28785_18392-26007' '(at1g68310 : 140.0) Encodes a protein that has been shown to specifically interact with a sequence motif, PIEPPPHH, in the cytoplasmic tail of a membrane protein that directs the protein from the ER to vacuoles where it is internalized.; FUNCTIONS IN: vacuolar sorting signal binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF59 (InterPro:IPR002744); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF59) (TAIR:AT3G50845.1); Has 563 Blast hits to 563 proteins in 217 species: Archae - 4; Bacteria - 0; Metazoa - 246; Fungi - 136; Plants - 85; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (gnl|cdd|38591 : 123.0) no description available & (gnl|cdd|34734 : 87.9) no description available & (reliability: 280.0) & (original description: Putative AE7, Description = UPF0195 protein FAM96A, PFAM = PF01883)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold28846_10593-13099' '(at4g25760 : 90.9) Encodes a member of the GDU (glutamine dumper) family proteins involved in amino acid export: At4g31730 (GDU1), At4g25760 (GDU2), At5g57685 (GDU3), At2g24762 (GDU4), At5g24920 (GDU5), At3g30725 (GDU6) and At5g38770 (GDU7).; glutamine dumper 2 (GDU2); BEST Arabidopsis thaliana protein match is: glutamine dumper 3 (TAIR:AT5G57685.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative GDU3, Description = Protein GLUTAMINE DUMPER 3, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold28945_1780-4964' '(at5g54530 : 189.0) Protein of unknown function, DUF538; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT1G61667.1); Has 418 Blast hits to 418 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 418; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86647 : 119.0) no description available & (reliability: 378.0) & (original description: Putative mc304, Description = Transmembrane protein, putative, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold28951_23283-25771' ' no hits & (original description: Putative PGSC0003DMG400016007, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold28977_19717-25400' '(at3g49601 : 91.3) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf21 (InterPro:IPR013170); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative CG7971, Description = CG7971, isoform F, PFAM = PF08312)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold29030_13395-16062' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold29077_19124-25813' '(at1g26470 : 129.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, H4/H2A histone acetyltransferase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CT20 (InterPro:IPR012423); Has 60 Blast hits to 60 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 2; Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative Os05g0512500, Description = Os05g0512500 protein, PFAM = PF07904)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold29167_13326-15788' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold29188_17281-19739' ' no hits & (original description: Putative PGSC0003DMG400030540, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold29301_1871-4362' '(at5g41810 : 104.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 514 Blast hits to 437 proteins in 98 species: Archae - 0; Bacteria - 21; Metazoa - 115; Fungi - 53; Plants - 52; Viruses - 5; Other Eukaryotes - 268 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative At5g41810, Description = BnaA07g15500D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold29365_19425-24165' ' (original description: Putative Os03g0598200, Description = Nucleolar protein 14, PFAM = PF04147)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold29405_346-5885' '(at4g29520 : 172.0) LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Saposin B (InterPro:IPR008139); Has 137 Blast hits to 137 proteins in 50 species: Archae - 2; Bacteria - 0; Metazoa - 41; Fungi - 10; Plants - 36; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative At4g29520, Description = BnaA08g13380D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold29415_22005-24643' ' (original description: Putative Os02g0661800, Description = Os02g0661800 protein, PFAM = PF01569)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold29506_2947-16069' '(at4g30150 : 840.0) CONTAINS InterPro DOMAIN/s: Nucleolar 27S pre-rRNA processing, Urb2/Npa2 (InterPro:IPR018849); Has 58 Blast hits to 49 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 44; Viruses - 3; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 1680.0) & (original description: Putative BnaAnng13770D, Description = BnaAnng13770D protein, PFAM = PF10441)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold29551_13775-23724' ' no hits & (original description: Putative PGSC0003DMG400032151, Description = Putative ovule protein, PFAM = PF04564)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold29612_986-5244' '(at4g15802 : 94.4) Encodes a protein with similarity to heat shock factor binding proteins. Involved in negative regulation of heat shock response. Becomes nuclear localized upon heat treatment.; heat shock factor binding protein (HSBP); CONTAINS InterPro DOMAIN/s: Heat shock factor binding 1 (InterPro:IPR009643); Has 319 Blast hits to 319 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 183; Fungi - 14; Plants - 74; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative hsbp2, Description = Heat shock factor binding protein 2, PFAM = PF06825)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold29637_18395-25430' ' (original description: Putative PLDZ, Description = Phospholipase D Z, PFAM = PF13091)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold29658_4938-10716' '(at3g11680 : 462.0) Aluminium activated malate transporter family protein; INVOLVED IN: response to aluminum ion; CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G08440.1); Has 773 Blast hits to 771 proteins in 231 species: Archae - 0; Bacteria - 374; Metazoa - 0; Fungi - 30; Plants - 352; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|39909 : 373.0) no description available & (gnl|cdd|85194 : 167.0) no description available & (reliability: 924.0) & (original description: Putative ALMT8, Description = Aluminum-activated malate transporter 8, PFAM = PF11744)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold29666_2341-6193' '(at1g32583 : 157.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: tapetum determinant 1 (TAIR:AT4G24972.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative MIL2, Description = AtTDL1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold29727_20946-24011' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold29766_2916-5308' ' no hits & (original description: Putative orf58, Description = Orf146 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold29792_16748-19110' ' no hits & (original description: Putative orf119c, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold29812_3610-20004' '(at5g58510 : 1073.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55060.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37601 : 197.0) no description available & (reliability: 2146.0) & (original description: Putative At5g58510, Description = Putative uncharacterized protein At5g58510, PFAM = PF13890)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold29884_15795-25253' ' no hits & (original description: Putative SOC1, Description = MADS-box transcription factor, PFAM = PF01486)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold30000_1-4548' '(at3g51010 : 126.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative PGSC0003DMG400025306, Description = At3g51010, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold30044_10692-15090' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold30072_16046-25137' '(at2g46000 : 140.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mesoderm development candidate 2 (InterPro:IPR019330); Has 31 Blast hits to 31 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative BnaA04g26600D, Description = BnaA04g26600D protein, PFAM = PF10185)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold30144_1-2689' '(at3g03210 : 315.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 59 Blast hits to 59 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 630.0) & (original description: Putative BnaA05g32440D, Description = BnaA05g32440D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold30280_19655-24989' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold30282_22471-24988' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold30325_1-12287' '(at4g25330 : 107.0) unknown protein; Has 21 Blast hits to 21 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative PGSC0003DMG401004292, Description = Rubisco methyltransferase family protein, PFAM = PF16719)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold30566_8307-15082' '(at5g26770 : 256.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05830.1); Has 26484 Blast hits to 16065 proteins in 1382 species: Archae - 343; Bacteria - 2653; Metazoa - 15273; Fungi - 2108; Plants - 1148; Viruses - 36; Other Eukaryotes - 4923 (source: NCBI BLink). & (reliability: 512.0) & (original description: Putative BnaC07g28570D, Description = BnaC07g28570D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold30600_8461-22195' '(at1g80000 : 188.0) CASC3/Barentsz eIF4AIII binding; CONTAINS InterPro DOMAIN/s: CASC3/Barentsz eIF4AIII binding (InterPro:IPR018545); BEST Arabidopsis thaliana protein match is: CASC3/Barentsz eIF4AIII binding (TAIR:AT1G15280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|87950 : 82.0) no description available & (reliability: 376.0) & (original description: Putative Os01g0595100, Description = Glycine-rich family protein, PFAM = PF09405)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold30738_1-6380' '(at5g21140 : 326.0) embryo defective 1379 (emb1379); CONTAINS InterPro DOMAIN/s: Nse1 non-SMC component of SMC5-6 complex (InterPro:IPR011513), Zinc finger, RING-like (InterPro:IPR014857); Has 255 Blast hits to 254 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 91; Fungi - 105; Plants - 49; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|87312 : 133.0) no description available & (reliability: 652.0) & (original description: Putative emb1379, Description = At5g21140, PFAM = PF08746;PF07574)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold30780_15526-22900' '(at4g35920 : 538.0) Encodes an integral plasma membrane protein. Functionally complements the yeast mid1 mutant, a deficiency of Ca2+ influx. Involved in Ca2+ influx and mechanical sensing in roots. An over-expression line showed increased Ca2+ uptake than the wild type plant. The primary root of a knock-out mutant failed to penetrate a harder agar medium from a softer medium.; mid1-complementing activity 1 (MCA1); CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT2G17780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86720 : 91.5) no description available & (reliability: 1076.0) & (original description: Putative MCA1, Description = Protein MID1-COMPLEMENTING ACTIVITY 1, PFAM = PF04749)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold30803_16204-19025' '(at4g02810 : 87.8) Protein of unknown function (DUF3049); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) (TAIR:AT1G03170.1); Has 61763 Blast hits to 21586 proteins in 896 species: Archae - 112; Bacteria - 2155; Metazoa - 26171; Fungi - 6892; Plants - 3461; Viruses - 1647; Other Eukaryotes - 21325 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative glysoja_028362, Description = Protein FANTASTIC FOUR 3, PFAM = PF11250)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold30806_2513-6835' ' no hits & (original description: Putative At3g11560, Description = LETM1-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold30871_11458-16015' '(at1g49290 : 107.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13620.1); Has 99 Blast hits to 93 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative BnaC09g43470D, Description = BnaC09g43470D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold30884_13929-24568' '(at1g13770 : 511.0) ROOT UV-B SENSITIVE 3 (RUS3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT3G45890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68458 : 377.0) no description available & (gnl|cdd|39450 : 235.0) no description available & (reliability: 1022.0) & (original description: Putative RUS3, Description = Protein root UVB sensitive 3, PFAM = PF04884)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold30956_19615-24008' ' no hits & (original description: Putative MKS1, Description = Protein MKS1, PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold31020_14982-16734' '(gnl|cdd|36304 : 158.0) no description available & (at1g22270 : 135.0) Encodes SMO2 (Small Organ 2). Modulates progression of cell division during organ growth.; Trm112p-like protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF343 (InterPro:IPR005651); BEST Arabidopsis thaliana protein match is: Trm112p-like protein (TAIR:AT1G78190.1); Has 419 Blast hits to 419 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 151; Fungi - 129; Plants - 62; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative At1g78190, Description = Multifunctional methyltransferase subunit TRM112-like protein At1g78190, PFAM = PF03966)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold31078_12256-17568' '(at3g24150 : 227.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32295.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative At3g24150, Description = Putative uncharacterized protein At3g24150, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold31179_21696-24375' '(at3g17030 : 196.0) Nucleic acid-binding proteins superfamily; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027); Has 37 Blast hits to 37 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative , Description = , PFAM = PF17246)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold31258_21694-24334' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold31260_15858-18361' ' no hits & (original description: Putative SUP13a, Description = Os07g0417400 protein, PFAM = PF13912)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold31268_4042-6245' '(at1g52855 : 91.3) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15534.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold31347_18827-21129' ' no hits & (original description: Putative orf101a, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold31485_1-15323' '(at1g36980 : 217.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0220 (InterPro:IPR007919); Has 424 Blast hits to 424 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 228; Fungi - 120; Plants - 62; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 434.0) & (original description: Putative TIDP2671, Description = Transmembrane protein 50A, PFAM = PF05255)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold31498_685-13510' '(at3g56040 : 969.0) UDP-glucose pyrophosphorylase 3 (UGP3); FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); Has 215 Blast hits to 211 proteins in 91 species: Archae - 0; Bacteria - 18; Metazoa - 12; Fungi - 60; Plants - 85; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 1938.0) & (original description: Putative UGP3, Description = UTP--glucose-1-phosphate uridylyltransferase 3, chloroplastic, PFAM = PF01704)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold31530_1-7062' '(at1g53800 : 354.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 708.0) & (original description: Putative BnaC06g06580D, Description = BnaC06g06580D protein, PFAM = PF07460)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold31546_1900-5318' '(at5g12010 : 567.0) unknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39785 : 212.0) no description available & (reliability: 1134.0) & (original description: Putative At5g12010, Description = AT5g12010/F14F18_180, PFAM = PF13359)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold31634_16892-22931' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold31744_6682-9048' ' no hits & (original description: Putative , Description = Integrase core domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold31751_5196-10140' '(at5g25080 : 182.0) Sas10/Utp3/C1D family; CONTAINS InterPro DOMAIN/s: Sas10/Utp3/C1D (InterPro:IPR007146), Exosome-associated factor Rrp47/DNA strand repair C1D (InterPro:IPR011082); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative BnaC09g04170D, Description = BnaC09g04170D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold31787_1191-3598' ' no hits & (original description: Putative At1g48990, Description = F27J15.22, PFAM = PF01277)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold31801_13045-23992' '(at2g43950 : 391.0) Constitutes a peptide sensitive ion channel in chloroplast outer membranes. Accumulates in germinating seeds and developing embryos.; chloroplast outer envelope protein 37 (OEP37); FUNCTIONS IN: ion channel activity; INVOLVED IN: cation transport; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast inner membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 782.0) & (original description: Putative OEP37, Description = Outer envelope pore protein 37, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold31847_1496-23958' '(at5g18420 : 510.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2363 (InterPro:IPR019312); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39708 : 423.0) no description available & (reliability: 1020.0) & (original description: Putative cnot11, Description = CCR4-NOT transcription complex subunit 11, PFAM = PF10155)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold31900_134-4998' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold32004_909-3181' ' no hits & (original description: Putative PGSC0003DMG400004295, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold32097_20045-22558' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold32123_4546-7755' ' no hits & (original description: Putative At2g04670, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF08284)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold32170_7845-17882' '(at5g18460 : 612.0) Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G23340.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66735 : 271.0) no description available & (reliability: 1224.0) & (original description: Putative NIP1, Description = NEP-interacting protein 1, PFAM = PF14365;PF03080)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold32201_4785-9734' ' no hits & (original description: Putative Os02g0640200, Description = Os02g0640200 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold32233_706-3011' ' (original description: Putative orf135, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold32238_4978-8759' '(at4g37420 : 458.0) Domain of unknown function (DUF23); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF23) (TAIR:AT5G40720.1); Has 241 Blast hits to 241 proteins in 76 species: Archae - 0; Bacteria - 129; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85620 : 106.0) no description available & (reliability: 916.0) & (original description: Putative BnaA01g00530D, Description = BnaA01g00530D protein, PFAM = PF01697)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold32475_11657-20423' '(at1g42480 : 175.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3456 (InterPro:IPR021852); Has 152 Blast hits to 152 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative BnaA08g04550D, Description = BnaA08g04550D protein, PFAM = PF11938)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold32513_2265-10588' '(at4g23950 : 375.0) Galactose-binding protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sad1/UNC-like, C-terminal (InterPro:IPR012919), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Galactose-binding protein (TAIR:AT1G22882.1). & (gnl|cdd|36610 : 241.0) no description available & (gnl|cdd|87361 : 115.0) no description available & (reliability: 750.0) & (original description: Putative sun2, Description = Uncharacterized protein slp1, PFAM = PF07738)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold32592_14066-21846' '(at2g32980 : 383.0) unknown protein; Has 158 Blast hits to 154 proteins in 73 species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 766.0) & (original description: Putative 37469, Description = AUGMIN subunit 2, PFAM = PF15003)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold32601_1276-14441' '(at1g05960 : 558.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Uncharacterized protein (TAIR:AT2G41830.1); Has 335 Blast hits to 327 proteins in 101 species: Archae - 0; Bacteria - 6; Metazoa - 143; Fungi - 47; Plants - 128; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37088 : 176.0) no description available & (reliability: 1116.0) & (original description: Putative umc2615, Description = Protein EFR3 isogeny, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold32601_13562-21971' '(at1g05960 : 317.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Uncharacterized protein (TAIR:AT2G41830.1); Has 335 Blast hits to 327 proteins in 101 species: Archae - 0; Bacteria - 6; Metazoa - 143; Fungi - 47; Plants - 128; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37088 : 202.0) no description available & (reliability: 634.0) & (original description: Putative umc2615, Description = BnaC04g02200D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold32627_8035-10730' ' no hits & (original description: Putative KNU, Description = Zinc finger protein 4, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold32633_10237-15871' '(at4g13200 : 93.2) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 97 Blast hits to 97 proteins in 46 species: Archae - 0; Bacteria - 65; Metazoa - 2; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative si707103b11b, Description = Uncharacterized protein At4g13200, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold32656_6704-10126' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold32719_1-8820' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold32776_7852-19573' '(at2g45000 : 327.0) EMBRYO DEFECTIVE 2766 (EMB2766); FUNCTIONS IN: structural constituent of nuclear pore; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, nuclear pore; CONTAINS InterPro DOMAIN/s: Nucleoporin, Nsp1-like, C-terminal (InterPro:IPR007758); Has 235342 Blast hits to 95277 proteins in 3388 species: Archae - 819; Bacteria - 58190; Metazoa - 65863; Fungi - 46438; Plants - 10106; Viruses - 2707; Other Eukaryotes - 51219 (source: NCBI BLink). & (gnl|cdd|37407 : 90.1) no description available & (reliability: 654.0) & (original description: Putative NUP62, Description = Nuclear pore glycoprotein p62, PFAM = PF05064)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold32820_12808-15326' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold32878_8795-11250' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold32882_866-5810' ' no hits & (original description: Putative dcl4, Description = Dicer-like protein 4, PFAM = PF14709)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold32928_13099-22547' '(at4g36440 : 442.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 41 Blast hits to 41 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 884.0) & (original description: Putative Sb03g010220, Description = Putative uncharacterized protein Sb03g010220, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold33066_17691-22796' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold33079_13235-23198' '(at3g14830 : 460.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53450.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 920.0) & (original description: Putative F383_16464, Description = ATP-dependent helicase/nuclease subunit A, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold33175_2581-5526' ' no hits & (original description: Putative nad1, Description = NADH-ubiquinone oxidoreductase chain 1, PFAM = PF00146)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold33175_4716-8059' ' (original description: Putative rpS13, Description = Ribosomal protein S13, PFAM = PF00416)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold33191_13153-23133' '(at5g21070 : 312.0) unknown protein; Has 115 Blast hits to 115 proteins in 34 species: Archae - 1; Bacteria - 36; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 624.0) & (original description: Putative BnaC09g36810D, Description = BnaC09g36810D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold33219_19167-21910' '(at4g15030 : 240.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site protein Fra10Ac1 (InterPro:IPR019129); Has 8498 Blast hits to 5699 proteins in 376 species: Archae - 6; Bacteria - 264; Metazoa - 3838; Fungi - 743; Plants - 650; Viruses - 76; Other Eukaryotes - 2921 (source: NCBI BLink). & (gnl|cdd|36511 : 200.0) no description available & (reliability: 480.0) & (original description: Putative amd1, Description = Cathepsin B-like cysteine proteinase 3, PFAM = PF09725)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold33259_850-5479' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold33260_2033-7815' ' no hits & (original description: Putative , Description = Putative chromatin structure-remodeling complex protein SYD-like, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold33390_17386-19595' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold33405_5089-8406' '(gnl|cdd|69860 : 190.0) no description available & (at4g04360 : 176.0) Protein of unknown function (DUF1068); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1068 (InterPro:IPR010471); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1068) (TAIR:AT2G32580.1); Has 119 Blast hits to 119 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|37034 : 112.0) no description available & (reliability: 352.0) & (original description: Putative BnaA03g25390D, Description = BnaA03g25390D protein, PFAM = PF06364)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold33455_8833-15997' '(at3g55350 : 433.0) PIF / Ping-Pong family of plant transposases; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G63270.1); Has 1213 Blast hits to 1213 proteins in 135 species: Archae - 0; Bacteria - 2; Metazoa - 520; Fungi - 50; Plants - 592; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|39785 : 186.0) no description available & (reliability: 866.0) & (original description: Putative At3g63270, Description = Putative uncharacterized protein At3g63270, PFAM = PF13359)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold33469_10280-13274' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold33523_17752-22917' ' (original description: Putative BnaA06g05820D, Description = Rhamnogalacturonate lyase, PFAM = PF06045)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold33716_18096-20638' ' no hits & (original description: Putative PGSC0003DMG400006509, Description = Putative ovule protein, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold33724_13983-18976' '(at5g25270 : 88.2) Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT5G42220.1); Has 11489 Blast hits to 5746 proteins in 742 species: Archae - 0; Bacteria - 401; Metazoa - 4954; Fungi - 1390; Plants - 2430; Viruses - 186; Other Eukaryotes - 2128 (source: NCBI BLink). & (gnl|cdd|29211 : 84.1) no description available & (reliability: 176.4) & (original description: Putative , Description = , PFAM = PF00240)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold33743_14402-17363' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold33772_12302-20699' '(at2g25800 : 1340.0) CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT2G20010.2); Has 317 Blast hits to 232 proteins in 40 species: Archae - 0; Bacteria - 8; Metazoa - 29; Fungi - 20; Plants - 175; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|69201 : 504.0) no description available & (reliability: 2680.0) & (original description: Putative Sb02g022610, Description = Putative uncharacterized protein Sb02g022610, PFAM = PF05664)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold33864_9908-12722' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold33878_3404-10074' '(at2g27090 : 668.0) Protein of unknown function (DUF630 and DUF632); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT4G39790.1); Has 977 Blast hits to 876 proteins in 150 species: Archae - 2; Bacteria - 21; Metazoa - 160; Fungi - 127; Plants - 553; Viruses - 15; Other Eukaryotes - 99 (source: NCBI BLink). & (gnl|cdd|68357 : 290.0) no description available & (reliability: 1336.0) & (original description: Putative At2g27090, Description = At2g27090, PFAM = PF04782;PF04783)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold33970_158-6161' '(at2g02370 : 379.0) SNARE associated Golgi protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT1G12450.1); Has 2420 Blast hits to 2420 proteins in 703 species: Archae - 6; Bacteria - 1288; Metazoa - 120; Fungi - 130; Plants - 226; Viruses - 0; Other Eukaryotes - 650 (source: NCBI BLink). & (gnl|cdd|87885 : 94.1) no description available & (reliability: 758.0) & (original description: Putative BnaA08g24730D, Description = BnaA08g24730D protein, PFAM = PF09335)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold33973_12729-19926' '(at5g38720 : 157.0) unknown protein; Has 13419 Blast hits to 9093 proteins in 698 species: Archae - 38; Bacteria - 1038; Metazoa - 4949; Fungi - 1086; Plants - 485; Viruses - 44; Other Eukaryotes - 5779 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative MTR_1g090650, Description = Ribosomal RNA-processing protein, PFAM = PF12923)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold33981_1-3434' '(at4g38090 : 315.0) Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0029, Impact, N-terminal (InterPro:IPR001498), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568). & (gnl|cdd|38509 : 164.0) no description available & (gnl|cdd|31925 : 153.0) no description available & (reliability: 630.0) & (original description: Putative yigZ, Description = Thymidylate synthase, PFAM = PF01205)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold34109_984-6072' '(at5g16060 : 112.0) Cytochrome c oxidase biogenesis protein Cmc1-like; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase biogenesis protein Cmc1-like (InterPro:IPR013892); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative Sb01g040610, Description = Putative uncharacterized protein Sb01g040610, PFAM = PF08583)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold34157_1-4266' '(at3g32930 : 256.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 512.0) & (original description: Putative At3g32930, Description = Putative uncharacterized protein At3g32930, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold34163_3120-5374' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold34255_1461-14439' '(at5g48520 : 824.0) unknown protein; Has 609 Blast hits to 593 proteins in 129 species: Archae - 0; Bacteria - 41; Metazoa - 390; Fungi - 40; Plants - 64; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 1648.0) & (original description: Putative 37834, Description = AUGMIN subunit 3, PFAM = PF14932)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold34320_19344-21949' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold34341_13605-17926' ' no hits & (original description: Putative , Description = Sterile alpha motif domain-containing protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold34461_810-20678' '(at2g04235 : 169.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 713 Blast hits to 345 proteins in 122 species: Archae - 2; Bacteria - 262; Metazoa - 138; Fungi - 55; Plants - 39; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative BnaCnng00500D, Description = BnaCnng00500D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold34607_18800-22292' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold34697_12372-18330' '(at4g19540 : 256.0) IND1(iron-sulfur protein required for NADH dehydrogenase)-like (INDL); LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ParA/MinD (InterPro:IPR019591); BEST Arabidopsis thaliana protein match is: ATP binding (TAIR:AT3G24430.1); Has 13193 Blast hits to 13164 proteins in 2587 species: Archae - 550; Bacteria - 7572; Metazoa - 442; Fungi - 431; Plants - 201; Viruses - 0; Other Eukaryotes - 3997 (source: NCBI BLink). & (gnl|cdd|38232 : 234.0) no description available & (gnl|cdd|83937 : 234.0) no description available & (reliability: 512.0) & (original description: Putative INDL, Description = Fe-S cluster assembly 31, PFAM = PF10609)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold34712_8127-12477' '(at1g04030 : 140.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44040.1); Has 1835 Blast hits to 1511 proteins in 238 species: Archae - 7; Bacteria - 164; Metazoa - 377; Fungi - 135; Plants - 187; Viruses - 22; Other Eukaryotes - 943 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative ATBARD1, Description = BnaA09g50720D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold34753_14573-17550' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold34781_7668-22193' '(at3g48860 : 220.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23700.1); Has 12429 Blast hits to 9751 proteins in 897 species: Archae - 180; Bacteria - 1190; Metazoa - 6552; Fungi - 1361; Plants - 886; Viruses - 50; Other Eukaryotes - 2210 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative RRP1, Description = Ripening-regulated protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold34821_12532-14789' ' no hits & (original description: Putative BnaC06g21340D, Description = BnaC06g21340D protein, PFAM = PF12609)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold34912_257-9232' '(at5g55040 : 488.0) DNA-binding bromodomain-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G20670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36173 : 161.0) no description available & (gnl|cdd|47625 : 108.0) no description available & (reliability: 976.0) & (original description: Putative glysoja_006393, Description = Bromodomain and PHD finger-containing protein 3, PFAM = PF00439)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold34932_12775-16583' ' (original description: Putative PGSC0003DMG400010242, Description = , PFAM = PF01190)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold35185_1-5821' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold35296_1557-5416' '(at4g01935 : 245.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 37 Blast hits to 37 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 490.0) & (original description: Putative F383_10477, Description = Insulin-induced protein 2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold35330_1511-4122' '(at1g52140 : 136.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative , Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold35399_14126-21329' ' no hits & (original description: Putative BnaC08g30680D, Description = BnaC08g30680D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold35416_1-10465' ' (original description: Putative F383_02089, Description = 3-phosphoshikimate 1-carboxyvinyltransferase, PFAM = PF02833)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold35449_1-5848' '(at3g18440 : 605.0) Belongs to the aluminum-activated malate transporter family. Encodes a vacuolar malate channel. Expressed in all parts of plants. Almost exclusively expressed in mesophyll cells of leaves.; aluminum-activated malate transporter 9 (ALMT9); CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G18420.1); Has 814 Blast hits to 808 proteins in 259 species: Archae - 0; Bacteria - 440; Metazoa - 0; Fungi - 20; Plants - 338; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|39909 : 463.0) no description available & (gnl|cdd|85194 : 173.0) no description available & (reliability: 1210.0) & (original description: Putative ALMT9, Description = Aluminum-activated malate transporter 9, PFAM = PF11744)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold35501_3123-5573' ' no hits & (original description: Putative At4g08070, Description = Transposon protein, putative, CACTA, En/Spm sub-class, PFAM = PF13960)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold35606_10301-18781' '(at1g13380 : 230.0) Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT4G27435.1); Has 523 Blast hits to 523 proteins in 97 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 523; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70227 : 120.0) no description available & (reliability: 460.0) & (original description: Putative 1G01, Description = Putative uncharacterized protein 1G01, PFAM = PF06749)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold35681_7621-9998' ' no hits & (original description: Putative , Description = , PFAM = PF05938)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold35754_14155-16472' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold35794_19012-21470' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold35805_17363-21621' '(at4g31410 : 334.0) Protein of unknown function (DUF1644); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1644) (TAIR:AT3G24740.2); Has 266 Blast hits to 247 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 263; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|71240 : 208.0) no description available & (reliability: 668.0) & (original description: Putative MTR_1g009790, Description = DUF1644 family protein, PFAM = PF07800)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold35834_5970-15319' '(at5g10320 : 421.0) unknown protein; Has 51 Blast hits to 50 proteins in 17 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 842.0) & (original description: Putative , Description = Polyadenylate-binding protein 2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold35841_16703-20183' ' no hits & (original description: Putative PGSC0003DMG400022257, Description = Oleosin, PFAM = PF01277)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold35869_17077-21423' '(at1g74830 : 298.0) Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT1G18990.1); Has 3601 Blast hits to 3088 proteins in 462 species: Archae - 26; Bacteria - 544; Metazoa - 962; Fungi - 241; Plants - 560; Viruses - 41; Other Eukaryotes - 1227 (source: NCBI BLink). & (gnl|cdd|68159 : 118.0) no description available & (reliability: 596.0) & (original description: Putative MYOB2, Description = Zein-binding protein, PFAM = PF04576)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold36060_8290-11707' '(at5g63000 : 271.0) Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); Has 40 Blast hits to 40 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|39808 : 169.0) no description available & (reliability: 542.0) & (original description: Putative BnaA06g22470D, Description = BnaA06g22470D protein, PFAM = PF02466)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold36060_8604-12318' '(at5g63000 : 197.0) Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); Has 40 Blast hits to 40 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|39808 : 132.0) no description available & (reliability: 394.0) & (original description: Putative BnaA06g22470D, Description = BnaA06g22470D protein, PFAM = PF02466)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold36075_6329-8905' ' no hits & (original description: Putative glysoja_049590, Description = Retrotransposon gag protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold36087_68-6775' '(at5g18250 : 165.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 330.0) & (original description: Putative Os01g0264500, Description = Os01g0264500 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold36121_1395-13971' '(at1g22060 : 808.0) LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G22000.1); Has 84739 Blast hits to 38714 proteins in 2257 species: Archae - 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706; Plants - 4675; Viruses - 308; Other Eukaryotes - 18553 (source: NCBI BLink). & (gnl|cdd|35383 : 98.4) no description available & (reliability: 1616.0) & (original description: Putative Sb03g046630, Description = Putative uncharacterized protein Sb03g046630, PFAM = PF10358)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold36123_11390-14811' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold36305_12083-14658' ' no hits & (original description: Putative PGSC0003DMG400014888, Description = RNase H family protein, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold36328_1-2038' '(at3g52710 : 90.5) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36220.1); Has 64 Blast hits to 64 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold36341_19404-21312' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold36357_305-2697' ' no hits & (original description: Putative , Description = OSJNBa0091C07.2 protein, PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold36382_9765-12515' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold36468_15945-19645' '(at2g01620 : 218.0) maternal effect embryo arrest 11 (MEE11); BEST Arabidopsis thaliana protein match is: Ribonuclease inhibitor (TAIR:AT3G26000.1); Has 234 Blast hits to 230 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 2; Plants - 81; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative SKIP28, Description = F-box protein SKIP28, PFAM = PF00646)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold36521_11574-14545' '(at1g01180 : 370.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: lipid biosynthetic process; EXPRESSED IN: sperm cell, hypocotyl; CONTAINS InterPro DOMAIN/s: Rhamnosyl O-methyltransferase/Cephalosporin hydroxylase (InterPro:IPR007072); Has 274 Blast hits to 274 proteins in 51 species: Archae - 0; Bacteria - 75; Metazoa - 2; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (reliability: 740.0) & (original description: Putative BnaC05g00730D, Description = BnaC05g00730D protein, PFAM = PF13578)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold36596_13724-19237' '(at1g48580 : 162.0) unknown protein; Has 91 Blast hits to 91 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative , Description = , PFAM = PF15072)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold36652_14887-20325' '(at1g28520 : 579.0) vascular plant one zinc finger protein (VOZ1); FUNCTIONS IN: transcription activator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: vascular plant one zinc finger protein 2 (TAIR:AT2G42400.1); Has 77 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1158.0) & (original description: Putative VOZ1, Description = Transcription factor VOZ1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold36707_7987-10601' '(at1g76600 : 106.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21010.1); Has 220 Blast hits to 220 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative F14G6.20, Description = Putative uncharacterized protein At1g76600, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold36717_12969-16923' ' (original description: Putative LgRT4, Description = Reverse transcriptases, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold36868_14060-17527' ' no hits & (original description: Putative PGSC0003DMG400024522, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold36887_16711-19190' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold36962_4546-16694' '(gnl|cdd|39684 : 146.0) no description available & (at5g43720 : 129.0) Protein of unknown function (DUF2361); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2361 (InterPro:IPR019310); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF2361) (TAIR:AT1G04230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative Sb01g005120, Description = Putative uncharacterized protein Sb01g005120, PFAM = PF10153)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold37002_13132-19887' '(at3g11760 : 303.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 606.0) & (original description: Putative At5g04860, Description = Multidrug and toxic compound extrusion protein, PFAM = PF10358)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold37003_4472-7471' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold37289_458-6398' '(at5g24000 : 410.0) Protein of unknown function (DUF819); LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF819 (InterPro:IPR008537); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF819) (TAIR:AT5G52540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|69220 : 296.0) no description available & (reliability: 820.0) & (original description: Putative CPLD14, Description = Predicted protein, PFAM = PF05684)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold37303_6744-8956' ' no hits & (original description: Putative PGSC0003DMG400029000, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold37571_2982-20442' '(at4g22970 : 830.0) Encodes a separase (ESP), homologous to human and mouse separase protein. Separase is a capase family protease required for the release of sister chromatid cohesion during meiosis and mitosis. Arabidopsis separase contains a predicted 2Fe2S-ferredoxin domain that is not present in the proteins of other organisms. Also contains a putative EF-hand calcium binding domain. Mutant seeds exhibited embryo arrest at the globular stage. The endosperm also exhibited a weak titan-like phenotype. Transgenic plants expressing AESP RNA interference (RNAi) from the meiosis-specific DMC1 promoter exhibited alterations in chromosome segregation during meiosis I and II that resulted in polyads containing from one to eight microspores. Plays an essential role in embryo development. Required for the removal of cohesin from meiotic chromosomes and establishment of meiotic nuclear domains. This gene was also identified through the rsw4 mutant. Lines carrying recessive, temperature-sensitive mutations exhibit reduced anisotropic growth at 30 degrees Celsius. Microtubules and cellulose microfibrils are not depleted or disoriented in the mutants at the restrictive temperature.; homolog of separase (ESP); FUNCTIONS IN: peptidase activity; INVOLVED IN: meiotic chromosome separation, chromosome separation, embryo development ending in seed dormancy, positive regulation of sister chromatid cohesion, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C50, separase (InterPro:IPR005314); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28550.1). & (gnl|cdd|86370 : 136.0) no description available & (reliability: 1660.0) & (original description: Putative , Description = Peptidase, related, PFAM = PF03568)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold37704_1-1878' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold37778_1-6071' '(at2g18410 : 298.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 596.0) & (original description: Putative ELP5, Description = Elongator complex protein 5, PFAM = PF10483)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold37890_13605-20470' '(at4g23020 : 90.5) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11780.1). & (reliability: 181.0) & (original description: Putative PGSC0003DMG400022757, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold37929_5312-7686' ' no hits & (original description: Putative INH3, Description = At2g31305, PFAM = PF07491)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold37939_9713-17970' '(at5g53620 : 407.0) unknown protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 28929 Blast hits to 19542 proteins in 1425 species: Archae - 211; Bacteria - 3079; Metazoa - 14558; Fungi - 2157; Plants - 966; Viruses - 80; Other Eukaryotes - 7878 (source: NCBI BLink). & (reliability: 814.0) & (original description: Putative Sb07g025350, Description = Putative uncharacterized protein Sb07g025350, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold37986_15592-20423' '(at5g61040 : 186.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative PGSC0003DMG400024637, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold38100_9217-12305' '(at2g39370 : 149.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37380.1); Has 184 Blast hits to 178 proteins in 53 species: Archae - 0; Bacteria - 58; Metazoa - 9; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative MAKR4, Description = BnaA10g12350D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold38100_15768-20356' ' no hits & (original description: Putative , Description = , PFAM = PF11069)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold38169_18242-20327' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold38215_12735-16276' ' no hits & (original description: Putative , Description = IQ-domain 21, putative isoform 1, PFAM = PF00612;PF00612;PF13178)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold38359_1103-6541' '(at4g16060 : 328.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative dl4070w, Description = BnaC07g33350D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold38609_7856-12051' '(at4g17760 : 228.0) damaged DNA binding;exodeoxyribonuclease IIIs; FUNCTIONS IN: damaged DNA binding, exodeoxyribonuclease III activity; INVOLVED IN: DNA repair; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Repair protein Rad1/Rec1 (InterPro:IPR003021); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative At4g17760, Description = Cell cycle checkpoint protein RAD1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold38624_15624-20086' '(at4g21215 : 85.5) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative BnaA03g58480D, Description = BnaA03g58480D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold38655_9103-11720' ' no hits & (original description: Putative PGSC0003DMG400000520, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold38778_1-8485' '(q6rhr6|dmi1_medtr : 680.0) Putative ion channel DMI-1 (Does not make infections protein 1) - Medicago truncatula (Barrel medic) & (at5g49960 : 672.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1012 (InterPro:IPR010420); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1012) (TAIR:AT5G02940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1344.0) & (original description: Putative DMI1, Description = DMI1 protein, PFAM = PF06241)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold38782_8164-13072' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold38850_12421-18941' '(at1g48405 : 113.0) Kinase interacting (KIP1-like) family protein; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT3G17680.1); Has 200 Blast hits to 198 proteins in 54 species: Archae - 0; Bacteria - 36; Metazoa - 14; Fungi - 10; Plants - 112; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative PGSC0003DMG400010158, Description = Kinase interacting (KIP1-like) family protein, PFAM = PF07765)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold38880_17774-19972' ' no hits & (original description: Putative PGSC0003DMG400026167, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold39037_14907-18203' '(at1g55370 : 261.0) NDH-dependent cyclic electron flow 5 (NDF5); FUNCTIONS IN: carbohydrate binding, catalytic activity; INVOLVED IN: positive regulation of gene expression, photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013); BEST Arabidopsis thaliana protein match is: NDH-dependent cyclic electron flow 1 (TAIR:AT1G64770.1); Has 166 Blast hits to 165 proteins in 21 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 158; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 522.0) & (original description: Putative NDF5, Description = Protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold39044_17046-19892' ' no hits & (original description: Putative PGSC0003DMG400001172, Description = Putative ovule protein, PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold39099_2899-5840' '(at5g10750 : 392.0) Protein of unknown function (DUF1336); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT5G24990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70520 : 233.0) no description available & (reliability: 784.0) & (original description: Putative EDR2, Description = Pleckstrin homology domain-containing family protein, PFAM = PF07059)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold39175_12344-16912' '(at2g40320 : 479.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 33 (TBL33); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 32 (TAIR:AT3G11030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72785 : 186.0) no description available & (reliability: 958.0) & (original description: Putative ESK1, Description = Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein, PFAM = PF13839)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold39236_9052-12446' '(at2g37035 : 251.0) unknown protein; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 502.0) & (original description: Putative BnaC04g08200D, Description = BnaC04g08200D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold39246_1-9365' '(at1g07040 : 434.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27030.1); Has 540 Blast hits to 538 proteins in 187 species: Archae - 0; Bacteria - 333; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 140 (source: NCBI BLink). & (reliability: 868.0) & (original description: Putative , Description = , PFAM = PF07063)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold39490_5731-8027' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold39607_14674-17069' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold39656_13292-19113' '(at1g49870 : 397.0) unknown protein; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 794.0) & (original description: Putative TCM_007196, Description = Uncharacterized protein isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold39746_7085-19321' '(at5g38720 : 156.0) unknown protein; Has 13419 Blast hits to 9093 proteins in 698 species: Archae - 38; Bacteria - 1038; Metazoa - 4949; Fungi - 1086; Plants - 485; Viruses - 44; Other Eukaryotes - 5779 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative PGSC0003DMG400010100, Description = Ribosomal RNA-processing protein, PFAM = PF12923)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold39781_1-9713' '(at2g03070 : 302.0) Encodes a subunit of the Mediator complex. Regulates plant defense and flowering.; mediator subunit 8 (MED8); Has 21670 Blast hits to 11104 proteins in 489 species: Archae - 4; Bacteria - 472; Metazoa - 8306; Fungi - 2813; Plants - 2364; Viruses - 51; Other Eukaryotes - 7660 (source: NCBI BLink). & (reliability: 604.0) & (original description: Putative MED8, Description = BnaC09g16070D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold39803_17731-19508' ' no hits & (original description: Putative PGSC0003DMG400009426, Description = At3g51500, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold39807_15112-19142' '(at1g17030 : 650.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G47010.2); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 1300.0) & (original description: Putative At2g47010, Description = At2g47010/F14M4.16, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold39822_1513-7063' '(at5g67620 : 163.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: microtubule; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative At5g67620, Description = At5g67620, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold39859_9622-15570' '(at3g19220 : 177.0) Encodes a zinc finger protein that is similar to a subgroup of DnaJ and is involved in cotyledon chloroplast biogenesis. Cyo1 is localized to the thylakoid membrane and has protein disulfide isomerase activity in vivo.Cyo1 is more highly expressed in light grown seedlings. Loss of function mutants have albino cotyledons and abnormal plastids.; SNOWY COTYLEDON 2 (SCO2); Has 34 Blast hits to 34 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative CYO1, Description = Protein disulfide-isomerase SCO2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold39952_302-10292' '(at2g43180 : 518.0) Phosphoenolpyruvate carboxylase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Isocitrate lyase/phosphorylmutase (InterPro:IPR000918); BEST Arabidopsis thaliana protein match is: Phosphoenolpyruvate carboxylase family protein (TAIR:AT1G77060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|32583 : 256.0) no description available & (gnl|cdd|36474 : 238.0) no description available & (q05957|cppm_diaca : 169.0) Putative carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) (Carboxyphosphonoenolpyruvate phosphonomutase) (CPEP phosphonomutase) (PSR132) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1036.0) & (original description: Putative bcpA, Description = Carboxyvinyl-carboxyphosphonate phosphorylmutase, PFAM = PF13714)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold39965_3923-10438' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold40081_10208-19370' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold40089_10198-16273' '(at5g64460 : 311.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G58280.1). & (gnl|cdd|39951 : 223.0) no description available & (reliability: 622.0) & (original description: Putative BnaC08g42490D, Description = BnaC08g42490D protein, PFAM = PF00300)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold40103_5096-19361' '(at3g48860 : 401.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23700.1); Has 12429 Blast hits to 9751 proteins in 897 species: Archae - 180; Bacteria - 1190; Metazoa - 6552; Fungi - 1361; Plants - 886; Viruses - 50; Other Eukaryotes - 2210 (source: NCBI BLink). & (reliability: 802.0) & (original description: Putative SCD2, Description = Coiled-coil domain-containing protein SCD2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold40193_1-1966' ' (original description: Putative RT4, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold40444_1243-12773' ' (original description: Putative Sb01g026340, Description = Putative uncharacterized protein Sb01g026340, PFAM = PF01702)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold40452_15234-19204' '(at3g32930 : 308.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 616.0) & (original description: Putative PGSC0003DMG400032183, Description = Putative uncharacterized protein At3g32930, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold40473_13760-16955' ' no hits & (original description: Putative PGSC0003DMG400003639, Description = WEB family plant protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold40558_8991-16638' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold40599_13441-16299' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold40739_1849-6248' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold40747_991-5538' '(at5g51340 : 202.0) Tetratricopeptide repeat (TPR)-like superfamily protein; Has 214 Blast hits to 140 proteins in 56 species: Archae - 0; Bacteria - 4; Metazoa - 151; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|37511 : 140.0) no description available & (reliability: 404.0) & (original description: Putative At5g51340, Description = BnaA10g08070D protein, PFAM = PF10345)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold40847_1-1834' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold40856_55-8383' ' no hits & (original description: Putative PGSC0003DMG400026019, Description = Phosphatidate cytidylyltransferase, PFAM = PF12874;PF12171)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold40879_9580-18812' ' no hits & (original description: Putative PGSC0003DMG400031864, Description = Arabinogalactan protein 26, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold40901_13100-18997' '(at5g27390 : 146.0) Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124); Has 23 Blast hits to 23 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative PPD8, Description = Photosystem II reaction center PsbP family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold41045_2259-5107' ' no hits & (original description: Putative PGSC0003DMG400029635, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold41126_13214-15960' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold41157_10504-14024' '(at1g11915 : 375.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 261 Blast hits to 261 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 261; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 750.0) & (original description: Putative BnaC05g09810D, Description = BnaC05g09810D protein, PFAM = PF13947)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold41228_9985-17746' ' no hits & (original description: Putative glysoja_022497, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold41328_9936-14266' '(at5g13100 : 430.0) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 860.0) & (original description: Putative , Description = Glucose-6-phosphate 1-dehydrogenase, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold41531_1-10411' '(at3g27325 : 776.0) hydrolases, acting on ester bonds; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: intracellular protein transport, GPI anchor metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PGAP1-like (InterPro:IPR012908). & (gnl|cdd|38928 : 419.0) no description available & (reliability: 1552.0) & (original description: Putative Sb02g015550, Description = Putative uncharacterized protein Sb02g015550, PFAM = PF07819)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold41707_4110-6695' ' (original description: Putative lea5, Description = Late embryogenis abundant protein 5, PFAM = PF03242)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold41738_15976-18608' ' no hits & (original description: Putative glysoja_042698, Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold41796_6569-9666' '(at2g39370 : 155.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37380.1); Has 184 Blast hits to 178 proteins in 53 species: Archae - 0; Bacteria - 58; Metazoa - 9; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative MAKR4, Description = Probable membrane-associated kinase regulator 4, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold41837_8063-10713' ' no hits & (original description: Putative PGSC0003DMG400025060, Description = , PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold42041_13101-15949' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold42061_10581-13051' ' no hits & (original description: Putative , Description = , PFAM = PF05340)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold42098_14998-17771' '(at2g27260 : 123.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G52460.1); Has 868 Blast hits to 868 proteins in 31 species: Archae - 2; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 862; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|70773 : 116.0) no description available & (reliability: 246.0) & (original description: Putative BnaA04g15720D, Description = BnaA04g15720D protein, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold42336_14765-18332' ' (original description: Putative Sb09g029540, Description = Putative uncharacterized protein Sb09g029540, PFAM = PF00501)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold42426_17049-18293' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold42435_541-17890' '(at3g59090 : 292.0) LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: tobamovirus multiplication 1 (TAIR:AT4G21790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 584.0) & (original description: Putative Sb03g034730, Description = Putative uncharacterized protein Sb03g034730, PFAM = PF06454;PF06454)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold42446_8455-11405' ' no hits & (original description: Putative , Description = , PFAM = PF11250)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold42510_1-6700' '(at2g38550 : 233.0) Transmembrane proteins 14C; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0136, Transmembrane (InterPro:IPR005349); BEST Arabidopsis thaliana protein match is: Transmembrane proteins 14C (TAIR:AT3G57280.1); Has 138 Blast hits to 137 proteins in 31 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 5; Plants - 115; Viruses - 7; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative FAX3, Description = Protein FATTY ACID EXPORT 3, chloroplastic, PFAM = PF03647)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold42540_1-5458' '(at5g49410 : 172.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G73940.1); Has 58 Blast hits to 58 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative BnaC02g39060D, Description = BnaC02g39060D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold42552_9834-12703' '(at4g24910 : 211.0) Protein of unknown function (DUF579); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF579 (InterPro:IPR021148), Conserved hypothetical protein CHP01627 (InterPro:IPR006514); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF579) (TAIR:AT5G67210.1); Has 253 Blast hits to 252 proteins in 21 species: Archae - 0; Bacteria - 5; Metazoa - 1; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|68247 : 206.0) no description available & (reliability: 422.0) & (original description: Putative BnaC07g39180D, Description = BnaC07g39180D protein, PFAM = PF04669)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold42577_2104-9582' '(at1g36990 : 108.0) unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in 339 species: Archae - 2; Bacteria - 1372; Metazoa - 990; Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes - 1593 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold42687_6817-13464' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold42773_14885-18142' ' no hits & (original description: Putative PGSC0003DMG400008341, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold42859_8792-11630' ' no hits & (original description: Putative SKU6, Description = Protein SPIRAL1-like 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold42964_8798-12615' ' no hits & (original description: Putative At4g22040, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold43146_16048-17972' ' no hits & (original description: Putative PGSC0003DMG400001059, Description = Serine/threonine-protein kinase, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold43157_1957-7443' ' no hits & (original description: Putative Dif54, Description = BnaA07g31240D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold43341_1-13681' '(at5g04910 : 174.0) unknown protein; Has 71 Blast hits to 71 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative Os01g0265700, Description = Os01g0265700 protein, PFAM = PF14966)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold43464_3869-6446' '(at1g70780 : 118.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 143 Blast hits to 143 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative BnaC07g20880D, Description = BnaC07g20880D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold43467_418-6386' '(at5g22120 : 182.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative At5g22120, Description = At5g22100, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold43619_6411-13845' '(at5g67610 : 385.0) Uncharacterized conserved protein (DUF2215); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2215 (InterPro:IPR019358); BEST Arabidopsis thaliana protein match is: Uncharacterized conserved protein (DUF2215) (TAIR:AT3G49840.1); Has 145 Blast hits to 145 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 61; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 770.0) & (original description: Putative BnaA06g24920D, Description = BnaA06g24920D protein, PFAM = PF10225)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold43693_2330-12730' '(at4g15730 : 195.0) CW-type Zinc Finger; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: CW-type Zinc Finger (TAIR:AT3G62900.1); Has 395 Blast hits to 319 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 141; Fungi - 0; Plants - 166; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative dl3905c, Description = CW-type zinc-finger protein, PFAM = PF07496)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold43720_4476-8669' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold43734_295-2936' ' no hits & (original description: Putative PGSC0003DMG400012180, Description = AP2/ERF domain-containing protein, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold43784_13444-16043' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold44167_3946-7526' '(at2g39690 : 395.0) Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT3G12540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68359 : 171.0) no description available & (reliability: 790.0) & (original description: Putative BnaA04g22920D, Description = BnaA04g22920D protein, PFAM = PF14389;PF04784)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold44275_10840-17111' '(at5g52980 : 190.0) CONTAINS InterPro DOMAIN/s: ATPase, vacuolar ER assembly factor, Vma12 (InterPro:IPR021013); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 380.0) & (original description: Putative BnaC02g14800D, Description = BnaC02g14800D protein, PFAM = PF11712)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold44370_11435-14388' ' no hits & (original description: Putative , Description = , PFAM = PF13963)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold44378_13598-17439' '(at5g59990 : 127.0) CCT motif family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, stem, leaf whorl, flower; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT5G41380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative ASL2, Description = CCT motif family protein, PFAM = PF06203)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold44420_376-14104' '(at3g10650 : 162.0) BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast hits to 31782 proteins in 2093 species: Archae - 202; Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants - 1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative PGSC0003DMG400023499, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold44440_15039-17410' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold44481_1986-8524' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold44560_1-2230' ' no hits & (original description: Putative , Description = Replication factor C subunit, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold44568_5584-13500' '(at4g14180 : 813.0) Encodes a protein that is involved in meiotic recombination and is required for meiotic double strand break repair.; putative recombination initiation defect 1 (PRD1); FUNCTIONS IN: protein binding, protein homodimerization activity; INVOLVED IN: chiasma assembly, meiotic DNA double-strand break formation; LOCATED IN: chloroplast; EXPRESSED IN: floral bud; Has 86 Blast hits to 84 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 21; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 1626.0) & (original description: Putative TCM_020185, Description = Recombination initiation defect 1, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold44581_1-4700' '(at4g39670 : 266.0) Glycolipid transfer protein (GLTP) family protein; FUNCTIONS IN: glycolipid transporter activity, glycolipid binding; INVOLVED IN: glycolipid transport; LOCATED IN: cytoplasm; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: Glycolipid transfer protein (GLTP) family protein (TAIR:AT2G34690.1); Has 290 Blast hits to 289 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 22; Plants - 133; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|39391 : 191.0) no description available & (gnl|cdd|87613 : 163.0) no description available & (reliability: 532.0) & (original description: Putative At4g39670, Description = ACD11 homolog protein, PFAM = PF08718)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold44594_9525-28971' '(at3g20720 : 932.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (gnl|cdd|38166 : 729.0) no description available & (reliability: 1864.0) & (original description: Putative BnaCnng30010D, Description = BnaCnng30010D protein, PFAM = PF12624)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold44597_14326-17343' '(at2g05910 : 189.0) Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT5G20640.1); Has 302 Blast hits to 301 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 300; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86676 : 118.0) no description available & (reliability: 378.0) & (original description: Putative At2g05910, Description = Protein LURP-one-related 6, PFAM = PF04525)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold44651_581-6471' '(at1g54990 : 413.0) auxin response mutant (AXR4); AUXIN RESISTANT 4 (AXR4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to mechanical stimulus, auxin polar transport; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; Has 139 Blast hits to 139 proteins in 43 species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 826.0) & (original description: Putative AXR4, Description = Protein AUXIN RESPONSE 4, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold44654_12876-17321' '(at1g24095 : 222.0) Putative thiol-disulphide oxidoreductase DCC; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Putative thiol-disulphide oxidoreductase DCC (InterPro:IPR007263); BEST Arabidopsis thaliana protein match is: Putative thiol-disulphide oxidoreductase DCC (TAIR:AT1G52590.1). & (gnl|cdd|32828 : 102.0) no description available & (reliability: 444.0) & (original description: Putative PHYPADRAFT_18248, Description = Predicted protein, PFAM = PF04134)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold44878_7063-14981' '(at4g31010 : 475.0) RNA-binding CRS1 / YhbY (CRM) domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain-containing protein (TAIR:AT5G54890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85815 : 90.6) no description available & (reliability: 950.0) & (original description: Putative At4g31010, Description = CRS2-associated factor 1, mitochondrial, PFAM = PF01985;PF01985)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold44902_4238-13315' '(at3g50430 : 278.0) unknown protein; Has 54 Blast hits to 54 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 29; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 556.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF14694;PF14695)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold44971_1946-16184' '(at2g31600 : 192.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative BnaA03g14620D, Description = BnaA03g14620D protein, PFAM = PF13891)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold44981_7396-14915' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold45029_13572-16388' '(at2g16460 : 172.0) Protein of unknown function (DUF1640); FUNCTIONS IN: metal ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1640 (InterPro:IPR012439); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1640) (TAIR:AT3G51090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|71238 : 134.0) no description available & (gnl|cdd|38366 : 118.0) no description available & (reliability: 344.0) & (original description: Putative At2g16460, Description = FMP32-like protein, PFAM = PF07798)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold45051_4032-14015' ' no hits & (original description: Putative Sb01g019530, Description = Putative uncharacterized protein Sb01g019530, PFAM = PF12894;PF00400)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold45089_137-8874' '(at4g09830 : 159.0) Uncharacterised conserved protein UCP009193; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP009193 (InterPro:IPR016549); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP009193 (TAIR:AT5G64780.1); Has 86 Blast hits to 86 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative , Description = Putative nuclear receptor subfamily 2 group C member 2-like, PFAM = PF15251)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold45096_14638-17131' '(at3g08780 : 197.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative DREB2C, Description = Dehydration-responsive element-binding protein 2A, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold45131_5088-7934' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold45137_9615-12819' '(at5g04730 : 99.0) Ankyrin-repeat containing protein; BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G04700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative , Description = , PFAM = PF12796;PF13962)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold45226_741-2884' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold45233_4866-12599' ' (original description: Putative rgga, Description = Hyaluronan/mRNA-binding protein, PFAM = PF09598;PF04774)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold45253_13146-16518' '(at3g04300 : 137.0) RmlC-like cupins superfamily protein; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Protein of unknown function DUF861, cupin-3 (InterPro:IPR008579), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT4G10300.1); Has 512 Blast hits to 512 proteins in 136 species: Archae - 0; Bacteria - 273; Metazoa - 0; Fungi - 0; Plants - 140; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (gnl|cdd|69424 : 93.0) no description available & (reliability: 274.0) & (original description: Putative TCM_032356, Description = RmlC-like cupins superfamily protein, PFAM = PF05899)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold45273_4237-7707' '(at3g22970 : 305.0) Protein of unknown function (DUF506) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT4G14620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68298 : 225.0) no description available & (reliability: 610.0) & (original description: Putative glysoja_028213, Description = Bifunctional DNA-directed RNA polymerase subunit beta-beta, PFAM = PF04720)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold45436_6236-16050' '(at2g18876 : 441.0) Afadin/alpha-actinin-binding protein; CONTAINS InterPro DOMAIN/s: Afadin/alpha-actinin-binding (InterPro:IPR021622); BEST Arabidopsis thaliana protein match is: Afadin/alpha-actinin-binding protein (TAIR:AT5G57410.2); Has 2181 Blast hits to 1953 proteins in 285 species: Archae - 6; Bacteria - 183; Metazoa - 1166; Fungi - 140; Plants - 107; Viruses - 0; Other Eukaryotes - 579 (source: NCBI BLink). & (reliability: 882.0) & (original description: Putative Sb07g007620, Description = Putative uncharacterized protein Sb07g007620, PFAM = PF11559)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold45467_11106-14350' '(at1g45688 : 298.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 596.0) & (original description: Putative BnaA10g05480D, Description = BnaA10g05480D protein, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold45581_1-6481' '(at1g17665 : 244.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; Has 149 Blast hits to 146 proteins in 39 species: Archae - 0; Bacteria - 4; Metazoa - 21; Fungi - 5; Plants - 30; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). & (reliability: 488.0) & (original description: Putative F11A6.1, Description = F11A6.1 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold45623_14998-19596' '(at4g28260 : 447.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 50 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 894.0) & (original description: Putative Sb01g018020, Description = Putative uncharacterized protein Sb01g018020, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold45661_9367-12239' ' no hits & (original description: Putative PGSC0003DMG400009473, Description = Cyclin C/H/T/L, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold45767_3973-10179' '(at4g25170 : 135.0) Uncharacterised conserved protein (UCP012943); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP012943 (InterPro:IPR016606); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein (UCP012943) (TAIR:AT5G61490.1); Has 19 Blast hits to 19 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold45804_4324-7677' '(at5g47635 : 121.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT2G40113.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative At5g47635, Description = At5g47635, PFAM = PF01190)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold45852_7072-9500' ' no hits & (original description: Putative PGSC0003DMG400037562, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold45877_12788-17139' '(at2g40060 : 152.0) Clathrin light chain protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin light chain (InterPro:IPR000996); BEST Arabidopsis thaliana protein match is: Clathrin light chain protein (TAIR:AT3G51890.1); Has 548 Blast hits to 536 proteins in 149 species: Archae - 2; Bacteria - 80; Metazoa - 210; Fungi - 41; Plants - 105; Viruses - 2; Other Eukaryotes - 108 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative CLC2, Description = Clathrin light chain 2, PFAM = PF01086)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold45943_3677-6507' ' (original description: Putative CSP2, Description = Cold shock protein 2, PFAM = PF00313;PF00098;PF00098;PF00098;PF00098)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold45967_7184-10593' ' no hits & (original description: Putative , Description = , PFAM = PF08991)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold46118_10953-16696' '(at3g07210 : 506.0) unknown protein; Has 97 Blast hits to 85 proteins in 31 species: Archae - 0; Bacteria - 14; Metazoa - 7; Fungi - 19; Plants - 37; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 1012.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold46228_5877-16614' '(at3g04830 : 462.0) Protein prenylyltransferase superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Protein prenylyltransferase superfamily protein (TAIR:AT5G28220.1); Has 523 Blast hits to 519 proteins in 216 species: Archae - 31; Bacteria - 43; Metazoa - 200; Fungi - 109; Plants - 58; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (gnl|cdd|38270 : 299.0) no description available & (reliability: 924.0) & (original description: Putative PGSC0003DMG400022512, Description = O-linked GlcNAc transferase, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold46357_14093-16591' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold46396_224-2547' ' no hits & (original description: Putative T19F11.1, Description = Putative uncharacterized protein At3g11600, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold46412_13117-22918' '(at5g51180 : 492.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G25770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39573 : 295.0) no description available & (gnl|cdd|68625 : 227.0) no description available & (reliability: 984.0) & (original description: Putative At5g51180, Description = AT5G51180 protein, PFAM = PF05057)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold46460_2462-4877' '(atmg00030 : 125.0) hypothetical protein; unknown protein. & (reliability: 250.0) & (original description: Putative orf138c, Description = Uncharacterized mitochondrial protein AtMg00030, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold46506_4049-12297' '(at1g58520 : 511.0) RXW8; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G59406.1); Has 3216 Blast hits to 3174 proteins in 135 species: Archae - 0; Bacteria - 157; Metazoa - 0; Fungi - 2; Plants - 3048; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|36349 : 284.0) no description available & (gnl|cdd|66403 : 161.0) no description available & (reliability: 1022.0) & (original description: Putative HYP1, Description = ERD (Early-responsive to dehydration stress) family protein, PFAM = PF02714;PF14703;PF13967)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold46520_7085-11324' '(at3g57570 : 122.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024). & (reliability: 244.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold46555_6937-11930' '(at2g40435 : 119.0) BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative BnaC06g42410D, Description = BnaC06g42410D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold46567_1-8088' '(at5g58600 : 464.0) Belongs to a large family of plant-specific genes of unknown function. Involved in resistance to the powdery mildew species Erysiphe cichoracearum and Erysiphe orontii, but not to the unrelated pathogens Pseudomonas syringae or Peronospora parasitica. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; POWDERY MILDEW RESISTANT 5 (PMR5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 45 (TAIR:AT2G30010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72785 : 186.0) no description available & (reliability: 928.0) & (original description: Putative PMR5, Description = Protein PMR5, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold46577_8520-13913' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold46616_8935-13244' '(at5g19050 : 184.0) alpha/beta-Hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1749 (InterPro:IPR013744); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|40037 : 150.0) no description available & (reliability: 368.0) & (original description: Putative , Description = Alpha/beta-Hydrolases superfamily protein isoform 2, PFAM = PF08538)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold46750_9212-14245' '(at3g25400 : 145.0) CONTAINS InterPro DOMAIN/s: NTP Pyrophosphohydrolase MazG-related, RS21-C6 (InterPro:IPR011394), EAR (InterPro:IPR009039), NTP pyrophosphohydrolase MazG, putative catalytic core (InterPro:IPR004518); Has 1123 Blast hits to 1121 proteins in 452 species: Archae - 22; Bacteria - 753; Metazoa - 81; Fungi - 3; Plants - 83; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative dctpp1, Description = Nucleotide pyrophosphohydrolase, PFAM = PF12643)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold46750_9222-14196' '(at3g25400 : 145.0) CONTAINS InterPro DOMAIN/s: NTP Pyrophosphohydrolase MazG-related, RS21-C6 (InterPro:IPR011394), EAR (InterPro:IPR009039), NTP pyrophosphohydrolase MazG, putative catalytic core (InterPro:IPR004518); Has 1123 Blast hits to 1121 proteins in 452 species: Archae - 22; Bacteria - 753; Metazoa - 81; Fungi - 3; Plants - 83; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative dctpp1, Description = dCTP pyrophosphatase 1, PFAM = PF12643)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold46768_11491-16433' '(at3g21700 : 299.0) Monomeric G protein. Expressed in root epidermal cells that are destined to become atrichoblasts. Also expressed during pollen development and in the pollen tube tip.; SGP2; FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Mitochondrial Rho-like (InterPro:IPR013684), GTPase, Tem1 (InterPro:IPR017231); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT5G54840.1); Has 12242 Blast hits to 12235 proteins in 404 species: Archae - 2; Bacteria - 22; Metazoa - 5958; Fungi - 1374; Plants - 1920; Viruses - 3; Other Eukaryotes - 2963 (source: NCBI BLink). & (gnl|cdd|36886 : 281.0) no description available & (gnl|cdd|58011 : 264.0) no description available & (reliability: 598.0) & (original description: Putative sgp1, Description = Monomeric G protein SGP1, PFAM = PF00071)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold46807_13696-16414' '(at3g19120 : 521.0) PIF / Ping-Pong family of plant transposases; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12010.1); Has 644 Blast hits to 642 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 379; Fungi - 49; Plants - 189; Viruses - 3; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|39785 : 192.0) no description available & (reliability: 1042.0) & (original description: Putative , Description = , PFAM = PF13359)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold46923_5203-14434' '(at2g44525 : 257.0) Protein of unknown function (DUF498/DUF598); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF498 (InterPro:IPR007523); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF498/DUF598) (TAIR:AT3G60150.1); Has 933 Blast hits to 933 proteins in 412 species: Archae - 2; Bacteria - 549; Metazoa - 118; Fungi - 87; Plants - 61; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). & (gnl|cdd|38573 : 200.0) no description available & (gnl|cdd|86661 : 102.0) no description available & (reliability: 514.0) & (original description: Putative , Description = Putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like, PFAM = PF04430)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold46996_13731-16333' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold47087_3532-7016' '(at4g04780 : 124.0) Encodes the med21 subunit of the mediator complex which is involved in transcriptional regulation. MED21 interacts physically with the E3 ligase HUB1 and this interaction may be important in mediation defense responses to fungal pathogens.; mediator 21 (MED21); CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med21 (InterPro:IPR021384); Has 261 Blast hits to 261 proteins in 70 species: Archae - 0; Bacteria - 2; Metazoa - 108; Fungi - 6; Plants - 134; Viruses - 7; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|36723 : 105.0) no description available & (reliability: 248.0) & (original description: Putative SRB7, Description = Mediator of RNA polymerase II transcription subunit 21, PFAM = PF11221)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold47142_4078-9005' '(at5g04320 : 94.4) Shugoshin C terminus; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: meiotic chromosome segregation; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Shugoshin, C-terminal (InterPro:IPR011515); BEST Arabidopsis thaliana protein match is: Shugoshin C terminus (TAIR:AT3G10440.1); Has 2871 Blast hits to 2420 proteins in 372 species: Archae - 12; Bacteria - 318; Metazoa - 1409; Fungi - 181; Plants - 120; Viruses - 4; Other Eukaryotes - 827 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative SGO1, Description = At5g04320, PFAM = PF07557)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold47167_6978-12934' '(at3g01810 : 544.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2). & (reliability: 1088.0) & (original description: Putative BnaC04g02610D, Description = BnaC04g02610D protein, PFAM = PF10358)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold47254_12433-15406' '(at4g13220 : 100.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 27 Blast hits to 27 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative At4g13220, Description = BnaA08g31610D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold47445_3323-5941' '(at1g70160 : 299.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27020.1); Has 108 Blast hits to 108 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 598.0) & (original description: Putative At4g27020, Description = AT4g27020/F10M23_360, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold47603_782-16093' '(at5g08450 : 360.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR013951); Has 34444 Blast hits to 20801 proteins in 1175 species: Archae - 64; Bacteria - 2390; Metazoa - 15568; Fungi - 3729; Plants - 1886; Viruses - 208; Other Eukaryotes - 10599 (source: NCBI BLink). & (gnl|cdd|40040 : 200.0) no description available & (gnl|cdd|72067 : 94.7) no description available & (reliability: 720.0) & (original description: Putative F383_11715, Description = RXT3-like protein, PFAM = PF08642)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold48143_7744-15882' '(at5g25250 : 358.0) SPFH/Band 7/PHB domain-containing membrane-associated protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT5G25260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37879 : 228.0) no description available & (gnl|cdd|48211 : 99.9) no description available & (reliability: 716.0) & (original description: Putative FLOT1, Description = Flotillin-like protein 3, PFAM = PF01145)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold48201_16-3704' ' (original description: Putative PRP1, Description = Extensin-like repeat protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold48222_8316-16747' '(at4g39900 : 106.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative PGSC0003DMG400001876, Description = Uncharacterized protein isoform 3, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold48294_3678-13466' '(at5g59960 : 520.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1040.0) & (original description: Putative BnaA10g29610D, Description = BnaA10g29610D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold48302_11275-15676' ' no hits & (original description: Putative , Description = Seed biotin-containing SBP65, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold48490_4221-7421' ' no hits & (original description: Putative PGSC0003DMG400030843, Description = Plastid-targeted protein 3, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold48492_8469-15749' ' no hits & (original description: Putative , Description = , PFAM = PF05627)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold48555_1-3228' '(at4g27020 : 242.0) unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 484.0) & (original description: Putative At4g27020, Description = At4g27020/F10M23_360, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold48569_1-2596' ' no hits & (original description: Putative pol, Description = Retrotransposon protein, putative, unclassified, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold48637_1817-4998' ' no hits & (original description: Putative PGSC0003DMG401030137, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold48720_1-7542' '(at3g04560 : 370.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 16 growth stages; Has 227 Blast hits to 225 proteins in 83 species: Archae - 0; Bacteria - 17; Metazoa - 98; Fungi - 29; Plants - 51; Viruses - 1; Other Eukaryotes - 31 (source: NCBI BLink). & (reliability: 740.0) & (original description: Putative PHYPADRAFT_168414, Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold48819_10830-13099' ' no hits & (original description: Putative TCM_000747, Description = Late embryogenesis abundant protein group 8 protein, putative, PFAM = PF10714)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold48966_255-5583' '(at1g14590 : 382.0) Nucleotide-diphospho-sugar transferase family protein; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT2G02061.1); Has 314 Blast hits to 308 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 294; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 764.0) & (original description: Putative At1g14590, Description = Glycosyltransferase, PFAM = PF03407)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold48998_11413-15099' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Putative reverse transcriptase, identical, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold49046_1693-5549' '(at3g14920 : 627.0) Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A (InterPro:IPR021102); BEST Arabidopsis thaliana protein match is: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein (TAIR:AT5G05480.1); Has 261 Blast hits to 247 proteins in 94 species: Archae - 30; Bacteria - 27; Metazoa - 0; Fungi - 111; Plants - 90; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 1254.0) & (original description: Putative At3g14920, Description = Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein, PFAM = PF12222)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold49058_6668-9465' ' no hits & (original description: Putative PGSC0003DMG400013662, Description = , PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold49205_1195-9844' '(at1g11880 : 516.0) transferases, transferring hexosyl groups; FUNCTIONS IN: transferase activity, transferring hexosyl groups; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Mannosyltransferase, PIG-V (InterPro:IPR007315); Has 490 Blast hits to 469 proteins in 237 species: Archae - 6; Bacteria - 111; Metazoa - 123; Fungi - 146; Plants - 40; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|37858 : 291.0) no description available & (gnl|cdd|86571 : 286.0) no description available & (reliability: 1032.0) & (original description: Putative BnaC08g15140D, Description = BnaC08g15140D protein, PFAM = PF04188)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold49235_8164-10694' ' no hits & (original description: Putative PGSC0003DMG400008453, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold49237_5871-8335' ' no hits & (original description: Putative , Description = , PFAM = PF03732)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold49315_9445-11114' ' no hits & (original description: Putative orf132, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold49357_2820-5141' ' no hits & (original description: Putative , Description = Cysteine-rich protein, PFAM = PF09253)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold49361_1-14613' '(at2g26200 : 726.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410), Methyltransferase type 12 (InterPro:IPR013217); BEST Arabidopsis thaliana protein match is: Methyltransferase family protein (TAIR:AT1G54650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37572 : 295.0) no description available & (reliability: 1452.0) & (original description: Putative Mettl6, Description = Methyltransferase-like protein 6, PFAM = PF10294;PF08242)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold49415_9353-15407' '(at2g45900 : 114.0) Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related; BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT3G61380.1); Has 396 Blast hits to 374 proteins in 94 species: Archae - 0; Bacteria - 31; Metazoa - 55; Fungi - 42; Plants - 167; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative , Description = , PFAM = PF14309;PF12552)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold49430_11469-16035' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold49449_8294-12123' '(gnl|cdd|68069 : 183.0) no description available & (at2g44190 : 177.0) Encodes a novel microtubule binding protein that preferentially associates with nuclear microtubules during mitosis and is essential during the mitotic and cytokinetic stages that generate the endosperm and embryo.; ENDOSPERM DEFECTIVE 1 (EDE1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 (InterPro:IPR007573); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) (TAIR:AT3G60000.2); Has 456 Blast hits to 444 proteins in 94 species: Archae - 0; Bacteria - 6; Metazoa - 141; Fungi - 55; Plants - 202; Viruses - 3; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative EDE1, Description = Protein EMBRYO DEFECTIVE 3116, PFAM = PF04484)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold49479_7198-9533' ' no hits & (original description: Putative PGSC0003DMG400014888, Description = RNase H family protein, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold49479_7216-9830' ' no hits & (original description: Putative PGSC0003DMG400014888, Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, putative, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold49615_5928-11913' '(at4g33380 : 336.0) unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: pollen tube. & (reliability: 672.0) & (original description: Putative BnaC01g04830D, Description = BnaC01g04830D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold49834_9656-12362' ' no hits & (original description: Putative PGSC0003DMG400022309, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold49844_7148-11064' '(at1g71760 : 156.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 84 Blast hits to 84 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative , Description = , PFAM = PF15749)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold49915_3068-9697' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold49915_9698-15211' '(at4g01080 : 303.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 26 (TBL26); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 25 (TAIR:AT1G01430.1); Has 1341 Blast hits to 1324 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1336; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 606.0) & (original description: Putative TBL25, Description = PC-Esterase, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold49997_4894-9361' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold50078_6892-11065' ' no hits & (original description: Putative , Description = Putative heterogeneous nuclear ribonucleoproteins A2/B1-like, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold50133_8530-15129' '(at1g78995 : 130.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative Os06g0704200, Description = Os06g0704200 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold50134_6434-9930' ' no hits & (original description: Putative geg, Description = Gibberellin-regulated family protein, PFAM = PF02704)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold50193_7918-15109' '(at5g25590 : 537.0) INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52320.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68357 : 271.0) no description available & (reliability: 1074.0) & (original description: Putative BnaC07g29160D, Description = BnaC07g29160D protein, PFAM = PF04782;PF04783)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold50389_2553-15035' ' no hits & (original description: Putative , Description = , PFAM = PF12231)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold50392_8425-10859' ' no hits & (original description: Putative CTR1, Description = Constitutive triple response 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold50572_2895-8695' '(at1g67850 : 512.0) Protein of unknown function (DUF707); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G13000.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68772 : 508.0) no description available & (reliability: 1024.0) & (original description: Putative Os06g0727600, Description = Os06g0727600 protein, PFAM = PF05212)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold50598_8200-19713' '(at4g29590 : 409.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G01660.1); Has 1031 Blast hits to 1031 proteins in 322 species: Archae - 24; Bacteria - 646; Metazoa - 0; Fungi - 12; Plants - 95; Viruses - 0; Other Eukaryotes - 254 (source: NCBI BLink). & (reliability: 818.0) & (original description: Putative ubiE, Description = Ubiquinone/menaquinone biosynthesis methyltransferase, PFAM = PF08241)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold50774_20892-24737' '(at1g55340 : 178.0) Protein of unknown function (DUF1639); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1639 (InterPro:IPR012438); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1639) (TAIR:AT3G03880.1); Has 250 Blast hits to 247 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 250; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative F383_01731, Description = Aspartyl/glutamyl-tRNA (Asn/Gln) amidotransferase subunit B, PFAM = PF07797)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold50799_1456-5565' '(gnl|cdd|71286 : 231.0) no description available & (gnl|cdd|39482 : 219.0) no description available & (at5g39890 : 207.0) Protein of unknown function (DUF1637); FUNCTIONS IN: cysteamine dioxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1637 (InterPro:IPR012864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1637) (TAIR:AT5G15120.1); Has 361 Blast hits to 361 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 102; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative PCO2, Description = Plant cysteine oxidase 2, PFAM = PF07847)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold50809_8033-11737' ' no hits & (original description: Putative OXS3, Description = Oxidative stress 3, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold50813_10025-14887' '(at5g65810 : 357.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49720.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 714.0) & (original description: Putative At3g49720, Description = Uncharacterized protein At3g49720, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold50983_5684-11471' '(at1g73090 : 352.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages. & (reliability: 704.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold51005_7440-11390' '(at1g21280 : 102.0) CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative PGSC0003DMG400031555, Description = Polypeptide with an integrase domain, PFAM = PF14223;PF14244)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold51137_3502-9930' '(at5g19400 : 656.0) Encodes SMG7, a protein that possesses an evolutionarily conserved EST1 domain and exhibits strong homology to human SMG6 (EST1A) and SMG7 (EST1C) proteins. SMG7 plays an evolutionarily conserved role in nonsense-mediated RNA decay (NMD). Required for exit from meiosis. Hypomorphic smg7 alleles render mutant plants sterile by causing an unusual cell-cycle arrest in anaphase II that is characterized by delayed chromosome decondensation and aberrant rearrangement of the meiotic spindle. Disruption of SMG7 causes embryonic lethality.; SMG7; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: meiosis, spindle assembly involved in meiosis, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Telomerase activating protein Est1 (InterPro:IPR019458); BEST Arabidopsis thaliana protein match is: Telomerase activating protein Est1 (TAIR:AT1G28260.2). & (gnl|cdd|37373 : 235.0) no description available & (reliability: 1312.0) & (original description: Putative SMG7, Description = Protein SMG7, PFAM = PF10373;PF10374)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold51239_8142-11088' ' no hits & (original description: Putative PGSC0003DMG400018526, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold51289_3895-6536' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold51299_391-8435' '(at3g51130 : 492.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0183 (InterPro:IPR005373); Has 269 Blast hits to 265 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 82; Plants - 37; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|67302 : 359.0) no description available & (gnl|cdd|38030 : 315.0) no description available & (reliability: 984.0) & (original description: Putative PGSC0003DMG400003547, Description = UPF0183 protein, PFAM = PF03676;PF03676;PF03676)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold51386_7220-10659' '(gnl|cdd|68427 : 226.0) no description available & (at2g31160 : 212.0) LIGHT SENSITIVE HYPOCOTYLS 3 (LSH3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT1G07090.1); Has 309 Blast hits to 309 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 424.0) & (original description: Putative ELE, Description = Protein ELONGATED EMPTY GLUME, PFAM = PF04852)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold51491_9340-14635' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold51649_11491-13952' ' no hits & (original description: Putative PGSC0003DMG400006837, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold51671_884-6327' '(at4g39860 : 139.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G22270.1); Has 148 Blast hits to 144 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative At4g39860, Description = N-lysine methyltransferase SEE1, PFAM = PF13266;PF13266)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold51686_11486-13911' ' no hits & (original description: Putative PGSC0003DMG400007474, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold51704_919-13981' ' no hits & (original description: Putative PGSC0003DMG400021755, Description = Putative E3 ubiquitin-protein ligase RBBP6-like, PFAM = PF13923)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold51842_2020-11366' '(at3g26670 : 353.0) Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF803) (TAIR:AT3G23870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38133 : 149.0) no description available & (reliability: 706.0) & (original description: Putative Sb04g021230, Description = Probable magnesium transporter, PFAM = PF05653)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold51940_7638-11599' ' no hits & (original description: Putative , Description = , PFAM = PF07734;PF00646)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold52136_11139-14002' '(at2g47115 : 145.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative At1g10660, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold52197_820-3386' '(at3g12345 : 130.0) unknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative At3g12345, Description = FKBP-type peptidyl-prolyl cis-trans isomerase, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold52292_8105-14040' '(at2g26570 : 442.0) Encodes a coiled-coil protein WEB1 (weak chloroplast movement under blue light 1). WEB1, together with another coiled-coil protein WEB2/PMI2 (At1g66840), maintains the chloroplast photorelocation movement velocity.; Plant protein of unknown function (DUF827); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT4G33390.1); Has 151476 Blast hits to 77886 proteins in 3477 species: Archae - 2093; Bacteria - 37732; Metazoa - 61062; Fungi - 12741; Plants - 9509; Viruses - 541; Other Eukaryotes - 27798 (source: NCBI BLink). & (gnl|cdd|72811 : 128.0) no description available & (reliability: 884.0) & (original description: Putative WEL1, Description = Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like 1, PFAM = PF05701)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold52321_401-2916' ' no hits & (original description: Putative PGSC0003DMG400027328, Description = UDP-glycosyltransferase family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold52325_12260-14352' ' (original description: Putative R1, Description = Putative alpha-glucan water dikinase, chloroplastic-like, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold52438_585-3502' ' no hits & (original description: Putative PGSC0003DMG400009028, Description = DUF3049 family protein, PFAM = PF11250)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold52489_3047-11390' ' no hits & (original description: Putative PGSC0003DMG400007384, Description = EG45-like domain containing protein, PFAM = PF03330)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold52569_6888-10530' ' no hits & (original description: Putative WRHY2, Description = WRKY2 transcription factor, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold52846_10336-14164' '(at4g14615 : 84.3) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2346 (InterPro:IPR018625); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52825.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative At4g14615, Description = At4g14615, PFAM = PF09803)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold52868_3768-6148' '(at1g54120 : 84.7) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14060.1); Has 23 Blast hits to 23 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold52906_10516-13204' '(at2g21990 : 267.0) Protein of unknown function, DUF617; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: sepal, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF617, plant (InterPro:IPR006460); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF617 (TAIR:AT4G39610.1); Has 257 Blast hits to 257 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68336 : 229.0) no description available & (reliability: 534.0) & (original description: Putative MIZ1, Description = PH01B015M02.13 protein, PFAM = PF04759)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold53058_11641-14114' ' no hits & (original description: Putative , Description = , PFAM = PF10536)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold53115_7685-10217' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold53233_9659-12761' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold53244_6015-8323' ' no hits & (original description: Putative orf86, Description = ORF86, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold53257_3100-12802' ' no hits & (original description: Putative REN1, Description = Pleckstrin homology domain-containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold53316_5722-14016' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold53348_8381-11032' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold53385_12196-13990' ' no hits & (original description: Putative , Description = , PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold53452_5974-8504' '(at1g78895 : 200.0) Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT1G16825.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 400.0) & (original description: Putative RTNLB22, Description = Reticulon-like protein B22, PFAM = PF02453)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold53530_2385-5455' ' no hits & (original description: Putative , Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold53597_1-11948' '(at4g00450 : 1705.0) Encodes the Arabidopsis homolog of the transcriptional regulator MED12, is dynamically expressed during embryogenesis and regulates both developmental timing and the radial pattern formation. Involved in flowering time. The mutant enhances the expression of the flowering time (FT) gene. A knockout mutant of this gene showed late-flowering phenotype.; CENTER CITY (CCT); FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: photoperiodism, flowering, regulation of development, heterochronic, regulation of radial pattern formation; LOCATED IN: mediator complex, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med12 (InterPro:IPR019035); Has 216 Blast hits to 184 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 65; Plants - 86; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|39722 : 528.0) no description available & (reliability: 3410.0) & (original description: Putative MED12, Description = Mediator of RNA polymerase II transcription subunit 12, PFAM = PF09497)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold53638_379-4224' '(at3g01060 : 95.9) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative At3g01060, Description = Putative uncharacterized protein At3g01060, PFAM = PF14234)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold53711_1236-4189' '(at1g78110 : 187.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22230.1); Has 5452 Blast hits to 3541 proteins in 289 species: Archae - 4; Bacteria - 165; Metazoa - 1756; Fungi - 532; Plants - 205; Viruses - 141; Other Eukaryotes - 2649 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative T11I11.5, Description = At1g78110, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold53880_4916-10261' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold53918_6871-12231' '(at1g19140 : 297.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquinone biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: COQ9 (InterPro:IPR013718), Ubiquinone biosynthesis protein COQ9 (InterPro:IPR012762); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|71939 : 81.4) no description available & (reliability: 594.0) & (original description: Putative BnaC05g14800D, Description = BnaC05g14800D protein, PFAM = PF08511)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold54137_6639-9749' ' no hits & (original description: Putative , Description = Putative replication protein A 70 kDa DNA-binding subunit B-like, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold54195_3490-7220' ' no hits & (original description: Putative PGSC0003DMG400021604, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold54205_448-3683' '(at1g54200 : 92.4) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13980.1); Has 1084 Blast hits to 581 proteins in 136 species: Archae - 0; Bacteria - 72; Metazoa - 212; Fungi - 78; Plants - 102; Viruses - 0; Other Eukaryotes - 620 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold54543_3256-5646' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold54738_1-1528' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold54918_2021-11912' '(at2g44760 : 539.0) CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF3598 (InterPro:IPR022017); Has 41 Blast hits to 35 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1078.0) & (original description: Putative TCM_005731, Description = Domain of Uncharacterized protein function, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold54940_11418-13469' ' no hits & (original description: Putative OLI2, Description = Putative ribosomal RNA methyltransferase NOP2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold54949_2128-4700' ' no hits & (original description: Putative PGSC0003DMG400013552, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold55014_1363-4279' ' no hits & (original description: Putative PGSC0003DMG400026538, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold55057_260-4501' '(at3g17780 : 167.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: B-cell receptor-associated 31-like (TAIR:AT1G48440.1); Has 102 Blast hits to 102 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative pco145813a, Description = Erwinia induced protein 2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold55081_5076-10115' ' no hits & (original description: Putative , Description = Zinc finger containing preotein, putative, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold55098_1-4406' '(at1g61740 : 379.0) Sulfite exporter TauE/SafE family protein; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF81 (InterPro:IPR002781); BEST Arabidopsis thaliana protein match is: Sulfite exporter TauE/SafE family protein (TAIR:AT1G11540.1); Has 2571 Blast hits to 2364 proteins in 652 species: Archae - 89; Bacteria - 1424; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 853 (source: NCBI BLink). & (reliability: 758.0) & (original description: Putative BnaA09g13620D, Description = BnaA09g13620D protein, PFAM = PF01925;PF01925)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold55119_551-5933' ' no hits & (original description: Putative LOC100281249, Description = Putative ovule protein, PFAM = PF01363)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold55349_1-11175' '(at5g41950 : 599.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: protein import into mitochondrial outer membrane; LOCATED IN: mitochondrial outer membrane translocase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Plant specific mitochondrial import receptor subunit TOM20 (InterPro:IPR010547); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1198.0) & (original description: Putative At5g41950, Description = UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase subunit, PFAM = PF06552)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold55476_6028-8399' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold55486_5086-8084' ' (original description: Putative NAC2, Description = NAC transcription factor, PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold55675_3493-6124' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold55741_7707-10297' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold55779_5528-12745' ' no hits & (original description: Putative L484_016785, Description = RING-H2 finger protein ATL32, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold55939_649-12293' '(at5g12170 : 420.0) Encodes one of the CRT-Like transporters (CLT1/AT5G19380, CLT2/AT4G24460, CLT3/AT5G12170). Required for glutathione homeostasis and stress responses. Mutants lacking these transporters are heavy metal-sensitive, glutathione(GSH)-deficient, and hypersensitive to Phytophthora infection.; CRT (chloroquine-resistance transporter)-like transporter 3 (CLT3); BEST Arabidopsis thaliana protein match is: CRT (chloroquine-resistance transporter)-like transporter 1 (TAIR:AT5G19380.1); Has 215 Blast hits to 213 proteins in 59 species: Archae - 0; Bacteria - 14; Metazoa - 5; Fungi - 2; Plants - 81; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (reliability: 840.0) & (original description: Putative CLT3, Description = Protein CLT3, chloroplastic, PFAM = PF08627)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold56196_4198-6825' ' no hits & (original description: Putative PGSC0003DMG400026255, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold56202_6562-9183' '(at4g37810 : 95.1) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative EPFL2, Description = EPIDERMAL PATTERNING FACTOR-like protein 2, PFAM = PF17181)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold56207_6381-10298' '(at2g31130 : 88.2) unknown protein; Has 116 Blast hits to 113 proteins in 44 species: Archae - 0; Bacteria - 3; Metazoa - 21; Fungi - 2; Plants - 40; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative PGSC0003DMG400020429, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold56330_1-1257' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold56353_5380-8962' ' no hits & (original description: Putative PGSC0003DMG400045247, Description = , PFAM = PF14368)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold56470_8401-12980' '(at4g02030 : 153.0) Vps51/Vps67 family (components of vesicular transport) protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps51/Vps67 (InterPro:IPR014812). & (gnl|cdd|37557 : 127.0) no description available & (reliability: 306.0) & (original description: Putative , Description = Putative vacuolar protein sorting-associated protein 51-like, PFAM = PF08700)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold56545_7652-12958' '(at1g38131 : 209.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G38065.1); Has 834 Blast hits to 825 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 834; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 142.0) no description available & (reliability: 418.0) & (original description: Putative At1g14970, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold56590_1908-4554' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold56674_2217-10726' ' no hits & (original description: Putative PGSC0003DMG400023471, Description = Single-stranded nucleic acid binding R3H protein, putative isoform 1, PFAM = PF12752;PF01424)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold56741_6194-12038' '(at4g30993 : 149.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative TCM_037088, Description = Calcineurin-like metallo-phosphoesterase superfamily protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold57059_6023-9489' '(at4g39840 : 307.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 20719 Blast hits to 6096 proteins in 607 species: Archae - 22; Bacteria - 3243; Metazoa - 4364; Fungi - 2270; Plants - 237; Viruses - 128; Other Eukaryotes - 10455 (source: NCBI BLink). & (reliability: 614.0) & (original description: Putative BnaA01g34680D, Description = BnaA01g34680D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold57145_612-9085' '(at3g49250 : 331.0) Similar to hinge-domain region of structural maintenance of chromosomes (SMC)proteins.Putative chromosome architecture protein that can potentialy link nucleic acids in facilitating an RNA1-mediated epigenetic modification involving secondary siRNA and spreading of DNA methylation.; DEFECTIVE IN MERISTEM SILENCING 3 (DMS3); BEST Arabidopsis thaliana protein match is: gamma-irradiation and mitomycin c induced 1 (TAIR:AT5G24280.1); Has 82 Blast hits to 81 proteins in 17 species: Archae - 6; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 662.0) & (original description: Putative DMS3, Description = Protein DEFECTIVE IN MERISTEM SILENCING 3, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold57179_5634-10366' '(at4g29310 : 497.0) Protein of unknown function (DUF1005); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1005 (InterPro:IPR010410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1005) (TAIR:AT1G10020.1); Has 138 Blast hits to 138 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|69725 : 220.0) no description available & (reliability: 994.0) & (original description: Putative At4g29310, Description = Putative uncharacterized protein AT4g29310, PFAM = PF06219)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold57233_2677-5459' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold57352_8988-11599' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold57367_3208-12662' ' no hits & (original description: Putative , Description = , PFAM = PF17035)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold57417_1625-4242' '(at3g44150 : 208.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11800.1); Has 76 Blast hits to 75 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 416.0) & (original description: Putative At3g11800, Description = BnaA05g27300D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold57460_7386-10648' '(at1g10150 : 346.0) Carbohydrate-binding protein; FUNCTIONS IN: carbohydrate binding; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Carbohydrate-binding protein (TAIR:AT1G59510.1); Has 114 Blast hits to 112 proteins in 22 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 110; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 692.0) & (original description: Putative PP2A10, Description = Protein PHLOEM PROTEIN 2-LIKE A10, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold57594_2213-5919' ' no hits & (original description: Putative PGSC0003DMG400014129, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold57659_3400-9255' '(at5g30490 : 114.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to 324 proteins in 149 species: Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|39973 : 84.8) no description available & (reliability: 228.0) & (original description: Putative MTR_4g123060, Description = Craniofacial development protein, PFAM = PF07572)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold57694_4905-8052' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold57982_5285-11118' '(gnl|cdd|69589 : 302.0) no description available & (at1g08760 : 138.0) Plant protein of unknown function (DUF936); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF936, plant (InterPro:IPR010341); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF936) (TAIR:AT3G14170.1); Has 718 Blast hits to 418 proteins in 99 species: Archae - 0; Bacteria - 149; Metazoa - 50; Fungi - 25; Plants - 280; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative At3g19610, Description = BnaA03g35340D protein, PFAM = PF06075)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold57993_5980-12508' '(at2g23470 : 441.0) ROOT UV-B SENSITIVE 4 (RUS4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT5G49820.1); Has 409 Blast hits to 406 proteins in 122 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 58; Plants - 179; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|39450 : 231.0) no description available & (gnl|cdd|68458 : 202.0) no description available & (reliability: 882.0) & (original description: Putative RUS4, Description = Protein root UVB sensitive 4, PFAM = PF04884)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold58130_11092-12464' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold58341_2845-5906' ' no hits & (original description: Putative , Description = , PFAM = PF07983)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold58435_1-4355' '(at1g73650 : 285.0) FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors; INVOLVED IN: lipid metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104), Protein of unknown function DUF1295 (InterPro:IPR010721); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1295) (TAIR:AT1G18180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|70433 : 236.0) no description available & (gnl|cdd|39849 : 205.0) no description available & (reliability: 570.0) & (original description: Putative v1g182482, Description = Predicted protein, PFAM = PF06966)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold58528_7263-10495' '(at3g12400 : 407.0) Mutants of this gene were initially identified because of the trichome morphogenesis phenotype. Those trichomes have multiple nuclei, a defect that turns out not to be restricted to the trichomes but also in all endoreduplicating cell types. This gene encodes a ubiquitin-binding protein with sequence similarities with yeast proteins that are components of the ESCRTI-III complexes. The Arabidopsis protein is found associated with the endosome.; ELC; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Tumour susceptibility gene 101 (InterPro:IPR008883), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), Steadiness box (InterPro:IPR017916); BEST Arabidopsis thaliana protein match is: ELCH-like (TAIR:AT5G13860.1); Has 587 Blast hits to 537 proteins in 178 species: Archae - 0; Bacteria - 3; Metazoa - 278; Fungi - 177; Plants - 63; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|37602 : 352.0) no description available & (gnl|cdd|86940 : 136.0) no description available & (reliability: 814.0) & (original description: Putative ELC, Description = Protein ELC, PFAM = PF05743;PF09454)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold58563_7165-10151' '(at3g25590 : 85.9) unknown protein; Has 149 Blast hits to 140 proteins in 44 species: Archae - 0; Bacteria - 6; Metazoa - 40; Fungi - 6; Plants - 39; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold58650_4684-9019' '(at5g53020 : 328.0) Ribonuclease P protein subunit P38-related; BEST Arabidopsis thaliana protein match is: Ribonuclease P protein subunit P38-related (TAIR:AT3G45900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative At5g53020, Description = Emb}, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold58702_4440-6902' ' (original description: Putative , Description = Non-specific lipid-transfer protein C, cotyledon-specific isoform, PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold58798_1-3455' '(at5g05480 : 437.0) Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A (InterPro:IPR021102); BEST Arabidopsis thaliana protein match is: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein (TAIR:AT3G14920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 874.0) & (original description: Putative At5g05480, Description = AT5g05480/MOP10_2, PFAM = PF12222)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold58819_166-12260' '(at4g19490 : 389.0) Putative homolog of yeast Vps54. Thought to associate with POK and ATVPS53 in a plant GARP-like complex involved in the membrane trafficking system.; VPS54; INVOLVED IN: retrograde transport, endosome to Golgi; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515), Vps54-like (InterPro:IPR012501); Has 471 Blast hits to 377 proteins in 168 species: Archae - 2; Bacteria - 4; Metazoa - 149; Fungi - 188; Plants - 45; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (gnl|cdd|37326 : 238.0) no description available & (reliability: 778.0) & (original description: Putative VPS54, Description = Vacuolar protein sorting-associated protein 54, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold59011_929-4496' ' no hits & (original description: Putative PGSC0003DMG400016167, Description = ROP-interactive CRIB motif protein, PFAM = PF00786)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold59175_1-3704' ' (original description: Putative ERF, Description = Ethylene responsive factor, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold59186_3245-6096' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold59193_9230-12147' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold59209_2038-12142' '(at3g48480 : 213.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: UB-like protease 1D (TAIR:AT1G60220.1); Has 84 Blast hits to 84 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 30; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative Sb05g009053, Description = Putative uncharacterized protein Sb05g009053, PFAM = PF02902)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold59218_10556-12141' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold59325_18-2650' ' no hits & (original description: Putative PGSC0003DMG400000520, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold59330_9529-12104' '(at2g26070 : 270.0) Encodes a predicted membrane protein. Similar sequences are widely distributed and conserved in plants, animals and protists but absent in fungi and prokaryotes. The sequence has no known motifs and no biological function has been assigned in any species. In Arabidopsis, it appears to be involved in the negative regulation of the response to ethylene, is localized to the Golgi and is a positive regulator of ETR1.; REVERSION-TO-ETHYLENE SENSITIVITY1 (RTE1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF778 (InterPro:IPR008496); BEST Arabidopsis thaliana protein match is: RTE1-homolog (TAIR:AT3G51040.3); Has 292 Blast hits to 292 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (gnl|cdd|69146 : 220.0) no description available & (gnl|cdd|38360 : 206.0) no description available & (reliability: 540.0) & (original description: Putative RTE1, Description = Protein REVERSION-TO-ETHYLENE SENSITIVITY1, PFAM = PF05608;PF05608)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold59509_3184-11927' ' no hits & (original description: Putative MTR_3g113810, Description = WEB family plant protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold59709_3862-6227' ' no hits & (original description: Putative PGSC0003DMG400023578, Description = Hydroxyproline-rich glycoprotein family protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold59829_5689-9858' '(at5g39570 : 87.8) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G29075.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative At5g39570, Description = Uncharacterized protein At5g39570, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold59910_2105-6671' ' no hits & (original description: Putative PGSC0003DMG400019084, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold59936_6117-11209' '(at1g22970 : 276.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71150.1); Has 134 Blast hits to 132 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 66; Fungi - 10; Plants - 48; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 552.0) & (original description: Putative BnaC05g18370D, Description = BnaC05g18370D protein, PFAM = PF13324)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold59959_7283-11188' '(at5g59830 : 235.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13660.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 470.0) & (original description: Putative F383_01599, Description = N-lysine methyltransferase SETD8-A, PFAM = PF16135)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold60064_5400-10809' '(at5g62580 : 356.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G27210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 712.0) & (original description: Putative At5g62580, Description = At5g62580, PFAM = PF02985)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold60192_6389-11870' '(gnl|cdd|68069 : 181.0) no description available & (at4g25190 : 176.0) Family of unknown function (DUF566) ; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 (InterPro:IPR007573); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) (TAIR:AT4G30710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative glysoja_048783, Description = , PFAM = PF04484)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold60354_8314-10631' ' no hits & (original description: Putative orf108a, Description = Orf108a, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold60417_60-5394' '(at5g63480 : 109.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative MED30, Description = Mediator of RNA polymerase II transcription subunit 30, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold60443_8508-10857' ' no hits & (original description: Putative , Description = , PFAM = PF02892)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold60452_1-3874' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold60494_7346-10534' '(at5g18130 : 129.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative UKP, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold60559_1293-3874' '(at5g52780 : 111.0) Protein of unknown function (DUF3464); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3464 (InterPro:IPR021855); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3464) (TAIR:AT4G19100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative PGSC0003DMG400009497, Description = Putative uncharacterized protein Sb01g030700, PFAM = PF11947)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold60603_8934-11029' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold60636_5726-11741' '(at1g29050 : 473.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 38 (TBL38); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 37 (TAIR:AT2G34070.1); Has 1347 Blast hits to 1329 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1344; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|72785 : 189.0) no description available & (reliability: 946.0) & (original description: Putative TBL39, Description = Protein trichome birefringence-like 39, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold60700_3594-7302' ' no hits & (original description: Putative PGSC0003DMG400022676, Description = Pollen-specific lysine-rich protein SBgLR, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold60736_5702-9426' '(at5g43490 : 81.6) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative PGSC0003DMG400004658, Description = Putative DNA ligase 1-like, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold61101_9058-11367' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold61322_2783-5853' ' (original description: Putative PGSC0003DMG400016473, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold61645_2499-10899' '(at4g31430 : 89.4) unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative , Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold61675_408-9575' '(at1g08390 : 156.0) unknown protein; Has 62 Blast hits to 62 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 34; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative , Description = , PFAM = PF16100)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold61735_233-2826' ' no hits & (original description: Putative , Description = , PFAM = PF05097)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold61741_4918-9101' '(at3g15095 : 146.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative hcf243, Description = Chloroplast protein HCF243, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold61797_2201-5532' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold62034_1-2389' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold62142_1-6469' '(at1g10385 : 740.0) Vps51/Vps67 family (components of vesicular transport) protein; CONTAINS InterPro DOMAIN/s: Vps51/Vps67 (InterPro:IPR014812); BEST Arabidopsis thaliana protein match is: exocyst complex component 84B (TAIR:AT5G49830.1); Has 436 Blast hits to 368 proteins in 139 species: Archae - 0; Bacteria - 32; Metazoa - 153; Fungi - 106; Plants - 134; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37426 : 382.0) no description available & (reliability: 1480.0) & (original description: Putative EXO84A, Description = Exocyst complex component EXO84A, PFAM = PF16528;PF08700)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold62171_1-7368' ' no hits & (original description: Putative PGSC0003DMG400005889, Description = mRNA decapping enzyme 1A, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold62238_329-8807' ' no hits & (original description: Putative PGSC0003DMG400014327, Description = Putative ovule protein, PFAM = PF01429;PF01429)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold62342_1-2668' ' no hits & (original description: Putative , Description = , PFAM = PF12937;PF07734)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold62481_914-9986' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold62504_3225-10960' '(at3g45750 : 337.0) Nucleotidyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT3G45760.1). & (gnl|cdd|37488 : 156.0) no description available & (gnl|cdd|34857 : 84.3) no description available & (reliability: 674.0) & (original description: Putative At3g45750, Description = Nucleotidyltransferase family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold62519_3723-10716' '(at2g40550 : 605.0) Encodes a nuclear localized target of E2Fa-DPa, transcription factors controlling cell cycle progression. Required for sister chromatid cohesion and DNA repair.; E2F target gene 1 (ETG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: sister chromatid cohesion, postreplication repair, DNA replication; LOCATED IN: nuclear replisome, nucleus, chloroplast envelope, MCM complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2044, membrane (InterPro:IPR019140); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37756 : 451.0) no description available & (reliability: 1210.0) & (original description: Putative ETG1, Description = Mini-chromosome maintenance complex-binding protein, PFAM = PF09739)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold62532_4870-10545' '(at3g51100 : 121.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold62585_1204-11194' '(at2g43945 : 341.0) unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G59870.1); Has 292 Blast hits to 292 proteins in 84 species: Archae - 0; Bacteria - 122; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (reliability: 682.0) & (original description: Putative orf228, Description = DNA recombination-mediator protein A, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold62616_2602-8285' '(at5g53330 : 169.0) Ubiquitin-associated/translation elongation factor EF1B protein; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative At5g53330, Description = Proline-rich cell wall protein-like, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold62637_2155-7189' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold62651_4205-7431' '(at5g66230 : 196.0) Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1). & (reliability: 392.0) & (original description: Putative At5g66230, Description = Chalcone-flavanone isomerase family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold62710_3921-7733' '(at4g27810 : 81.3) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G53030.1); Has 73 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative , Description = Putative ovule protein, PFAM = PF05097)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold62813_3392-9206' ' (original description: Putative Dif54, Description = BnaA07g31240D protein, PFAM = PF01190)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold62856_5694-11116' '(at2g26840 : 110.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43910.1). & (reliability: 220.0) & (original description: Putative At2g26840, Description = Putative uncharacterized protein At2g26840, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold62878_376-10018' '(at3g04020 : 214.0) unknown protein; Has 26 Blast hits to 25 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative pco085724, Description = BnaA05g37370D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold62892_6048-10141' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold63037_6923-11076' ' no hits & (original description: Putative NTH1, Description = Endonuclease III homolog, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold63311_1-1870' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold63422_4079-9194' '(at1g11200 : 416.0) Protein of unknown function (DUF300); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT4G21570.1); Has 839 Blast hits to 837 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 285; Fungi - 195; Plants - 241; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|37852 : 254.0) no description available & (gnl|cdd|67249 : 253.0) no description available & (reliability: 832.0) & (original description: Putative umc2329, Description = MAPK activating protein, PFAM = PF03619)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold63492_4700-7935' '(at3g06868 : 125.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold63701_1-3738' '(at5g55125 : 80.1) Ribosomal protein L31; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L31 (InterPro:IPR002150); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative BnaC02g13310D, Description = BnaC02g13310D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold63718_1-13879' '(at1g11060 : 474.0) WAPL (Wings apart-like protein regulation of heterochromatin) protein; BEST Arabidopsis thaliana protein match is: WAPL (Wings apart-like protein regulation of heterochromatin) protein (TAIR:AT1G61030.1); Has 319 Blast hits to 253 proteins in 105 species: Archae - 2; Bacteria - 73; Metazoa - 168; Fungi - 7; Plants - 48; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|37363 : 316.0) no description available & (gnl|cdd|87376 : 91.2) no description available & (reliability: 948.0) & (original description: Putative At1g11060, Description = WAPL (Wings apart-like protein regulation of heterochromatin) protein, PFAM = PF07814)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold64098_4078-10785' '(at5g38380 : 506.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); Has 109 Blast hits to 107 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 59; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 1012.0) & (original description: Putative At5g38380, Description = Putative uncharacterized protein At5g38380, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold64209_731-4721' ' no hits & (original description: Putative , Description = , PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold64216_2242-5412' '(at5g13250 : 108.0) RING finger protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: RING finger protein (TAIR:AT1G28080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold64448_1464-4457' ' no hits & (original description: Putative BnaC02g15020D, Description = BnaC02g15020D protein, PFAM = PF00076)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold64690_7349-9839' ' no hits & (original description: Putative BnaA03g00170D, Description = BnaA03g00170D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold64814_1470-5785' '(at3g54000 : 93.6) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold64821_1353-4654' '(at4g17940 : 120.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G20190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative TCM_003908, Description = Tetratricopeptide repeat-like superfamily protein, putative isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold65059_115-2426' '(at3g44150 : 117.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11800.1); Has 76 Blast hits to 75 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative At3g11800, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold65096_6479-8163' '(at4g25690 : 110.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative At4g25670, Description = AT4g25670/L73G19_50, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold65347_5815-8981' '(at3g13980 : 116.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54200.1); Has 1485 Blast hits to 418 proteins in 98 species: Archae - 0; Bacteria - 6; Metazoa - 246; Fungi - 61; Plants - 107; Viruses - 6; Other Eukaryotes - 1059 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold65373_7477-10455' ' no hits & (original description: Putative dhn2, Description = Dehydrin 2, PFAM = PF00257;PF00257)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold65484_3528-7059' ' no hits & (original description: Putative PGSC0003DMG400026512, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold65611_8591-10387' ' no hits & (original description: Putative , Description = Glutathione S-transferase, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold65652_809-3087' ' (original description: Putative putative LTP, Description = Putative lipid transfer protein, PFAM = PF14368)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold65716_4784-8432' '(at3g28430 : 313.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function FPL (InterPro:IPR019155); Has 243 Blast hits to 233 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 626.0) & (original description: Putative pco117880, Description = Uncharacterized protein isoform 3, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold65958_5318-9944' ' no hits & (original description: Putative At3g13910, Description = Probable magnesium transporter, PFAM = PF12023)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold65998_915-7406' '(at3g19220 : 188.0) Encodes a zinc finger protein that is similar to a subgroup of DnaJ and is involved in cotyledon chloroplast biogenesis. Cyo1 is localized to the thylakoid membrane and has protein disulfide isomerase activity in vivo.Cyo1 is more highly expressed in light grown seedlings. Loss of function mutants have albino cotyledons and abnormal plastids.; SNOWY COTYLEDON 2 (SCO2); Has 34 Blast hits to 34 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative SCO2, Description = Protein disulfide-isomerase SCO2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold66168_163-3284' ' no hits & (original description: Putative mt1k, Description = Metallothionein-like type 1 protein, PFAM = PF01439)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold66268_641-3102' ' no hits & (original description: Putative , Description = , PFAM = PF01190)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold66341_7318-9738' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold66453_6300-10174' '(at5g16660 : 112.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02900.1); Has 106 Blast hits to 106 proteins in 32 species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative At3g02900, Description = At3g02900, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold66484_6209-11385' '(at5g47420 : 311.0) Tryptophan RNA-binding attenuator protein-like; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF124 (InterPro:IPR002838), Tryptophan RNA-binding attenuator protein-like (InterPro:IPR016031); BEST Arabidopsis thaliana protein match is: Tryptophan RNA-binding attenuator protein-like (TAIR:AT4G17420.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|85816 : 140.0) no description available & (reliability: 622.0) & (original description: Putative Ccrd_006009, Description = Mitochondrial biogenesis protein AIM24, PFAM = PF01987)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold66708_5188-9786' ' no hits & (original description: Putative PGSC0003DMG400006032, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold66852_418-7780' '(at1g30755 : 562.0) Protein of unknown function (DUF668); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700), Protein of unknown function DUF3475 (InterPro:IPR021864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT1G34320.1); Has 465 Blast hits to 399 proteins in 71 species: Archae - 2; Bacteria - 14; Metazoa - 66; Fungi - 16; Plants - 336; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|68572 : 117.0) no description available & (reliability: 1124.0) & (original description: Putative Os06g0716000, Description = Os06g0716000 protein, PFAM = PF05003;PF11961)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold66894_6684-9295' ' no hits & (original description: Putative Sb08g020705, Description = OSJNBb0067G11.4 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold66909_2339-5537' '(at5g66230 : 200.0) Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1). & (reliability: 400.0) & (original description: Putative At5g66230, Description = At5g66230, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold67087_687-3855' ' (original description: Putative sar, Description = Putative SAR8.2a-like protein, PFAM = PF03058)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold67119_3537-10004' ' (original description: Putative LOC100284117, Description = Dual specificity protein phosphatase Diacylglycerol kinase, catalytic region, PFAM = PF00782)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold67142_8647-9998' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold67202_1352-9363' ' no hits & (original description: Putative PGSC0003DMG402013972, Description = , PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold67219_1-6239' '(at5g50350 : 103.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative PGSC0003DMG400015252, Description = Putative cactin-like, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold67266_1-1752' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold67436_1441-9920' '(at3g51580 : 119.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages. & (reliability: 238.0) & (original description: Putative At3g51580, Description = At3g51580, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold67607_1-2607' '(atmg00860 : 85.1) hypothetical protein; DNA/RNA polymerases superfamily protein. & (reliability: 170.2) & (original description: Putative Tgt1ORF2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF08284)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold67835_1037-7285' '(gnl|cdd|69222 : 594.0) no description available & (at2g45830 : 572.0) downstream target of AGL15 2 (DTA2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: stem, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF821) (TAIR:AT3G61270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37669 : 545.0) no description available & (reliability: 1144.0) & (original description: Putative DTA2, Description = Downstream target of AGL15 2, PFAM = PF05686)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold67888_6668-9333' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold67905_1901-6383' '(at4g11450 : 344.0) Protein of unknown function (DUF3527); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3527 (InterPro:IPR021916); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3527) (TAIR:AT1G63520.1); Has 132 Blast hits to 129 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 688.0) & (original description: Putative , Description = Bromo-adjacent domain-containing protein, PFAM = PF12043)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold67926_4580-9498' '(at3g02220 : 200.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2039 (InterPro:IPR019351); Has 215 Blast hits to 215 proteins in 94 species: Archae - 2; Bacteria - 2; Metazoa - 125; Fungi - 4; Plants - 38; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|38451 : 159.0) no description available & (reliability: 400.0) & (original description: Putative Sb03g035330, Description = Putative uncharacterized protein Sb03g035330, PFAM = PF10217)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold68277_3007-5312' ' no hits & (original description: Putative LOC257642, Description = LRRG00134, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold68293_961-4515' '(at5g30490 : 118.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to 324 proteins in 149 species: Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|39973 : 86.7) no description available & (reliability: 236.0) & (original description: Putative CFDP1, Description = Putative uncharacterized protein Sb03g013270, PFAM = PF07572)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold68300_1-3764' ' no hits & (original description: Putative orf107d, Description = ORF61c, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold68323_5990-9703' '(at1g67140 : 189.0) SWEETIE (SWEETIE); FUNCTIONS IN: binding; INVOLVED IN: trehalose metabolic process, carbohydrate metabolic process, starch metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024). & (gnl|cdd|37033 : 81.6) no description available & (reliability: 378.0) & (original description: Putative Os06g0505100, Description = HEAT repeat-containing protein isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold68397_8443-9687' ' no hits & (original description: Putative , Description = DNA/RNA polymerases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold68496_1-4366' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold68673_1-8998' '(at1g43245 : 246.0) SET domain-containing protein; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative , Description = , PFAM = PF00856)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold68685_425-7745' '(at3g13410 : 245.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55546.1); Has 49 Blast hits to 49 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 490.0) & (original description: Putative At3g13410, Description = Putative uncharacterized protein At3g13410, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold68771_6456-9025' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold69069_1-2560' ' no hits & (original description: Putative , Description = , PFAM = PF07816)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold69119_1-7946' '(at2g25737 : 469.0) Sulfite exporter TauE/SafE family protein; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF81 (InterPro:IPR002781); BEST Arabidopsis thaliana protein match is: Sulfite exporter TauE/SafE family protein (TAIR:AT2G36630.1); Has 3417 Blast hits to 2961 proteins in 724 species: Archae - 129; Bacteria - 1927; Metazoa - 0; Fungi - 0; Plants - 198; Viruses - 0; Other Eukaryotes - 1163 (source: NCBI BLink). & (reliability: 938.0) & (original description: Putative BnaA04g15090D, Description = BnaA04g15090D protein, PFAM = PF01925)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold69308_8380-9470' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold69484_517-9424' '(at2g02370 : 311.0) SNARE associated Golgi protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT1G12450.1); Has 2420 Blast hits to 2420 proteins in 703 species: Archae - 6; Bacteria - 1288; Metazoa - 120; Fungi - 130; Plants - 226; Viruses - 0; Other Eukaryotes - 650 (source: NCBI BLink). & (gnl|cdd|87885 : 87.9) no description available & (reliability: 622.0) & (original description: Putative LOC100272748, Description = SNARE associated Golgi protein family, PFAM = PF09335)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold69497_1-1405' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold69504_6217-8609' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold69719_4386-6796' ' no hits & (original description: Putative BnaA05g02670D, Description = BnaA05g02670D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold69721_90-3417' '(at5g47900 : 497.0) Protein of unknown function (DUF1624); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1624 (InterPro:IPR012429); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1624) (TAIR:AT5G27730.1). & (gnl|cdd|39881 : 368.0) no description available & (gnl|cdd|34021 : 121.0) no description available & (reliability: 994.0) & (original description: Putative gpm184, Description = Heparan-alpha-glucosaminide N-acetyltransferase, PFAM = PF07786)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold69906_1-2484' ' (original description: Putative RT, Description = Reverse transcriptase, PFAM = PF07727)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold69983_3687-6658' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold70056_1-7320' ' (original description: Putative PGSC0003DMG401028118, Description = KHG/KDPG aldolase, PFAM = PF01081)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold70106_33-7362' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold70300_1-1526' ' no hits & (original description: Putative PGSC0003DMG400017406, Description = Rubisco methyltransferase family protein, PFAM = PF16719)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold70360_4720-8234' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold70384_3212-8658' '(at5g30495 : 194.0) Fcf2 pre-rRNA processing protein; CONTAINS InterPro DOMAIN/s: Fcf2 pre-rRNA processing (InterPro:IPR014810); BEST Arabidopsis thaliana protein match is: Fcf2 pre-rRNA processing protein (TAIR:AT1G54770.1); Has 334 Blast hits to 334 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 124; Plants - 58; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|38310 : 137.0) no description available & (gnl|cdd|87602 : 113.0) no description available & (reliability: 388.0) & (original description: Putative DNTTIP2, Description = Deoxynucleotidyltransferase terminal-interacting protein 2, PFAM = PF08698)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold70412_3036-9025' '(at1g25520 : 159.0) Uncharacterized protein family (UPF0016); INVOLVED IN: response to karrikin; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0016 (InterPro:IPR001727); BEST Arabidopsis thaliana protein match is: Uncharacterized protein family (UPF0016) (TAIR:AT1G68650.1); Has 1806 Blast hits to 1733 proteins in 669 species: Archae - 27; Bacteria - 1021; Metazoa - 159; Fungi - 140; Plants - 210; Viruses - 0; Other Eukaryotes - 249 (source: NCBI BLink). & (gnl|cdd|38092 : 151.0) no description available & (gnl|cdd|32302 : 86.1) no description available & (reliability: 318.0) & (original description: Putative v1g146969, Description = GDT1-like protein 4, PFAM = PF01169)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold70477_2539-9195' '(at4g39900 : 115.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative At4g39900, Description = AT4g39900/T5J17_70, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold70534_7063-9179' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold70573_4878-9170' '(at1g71240 : 225.0) Plant protein of unknown function (DUF639); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF639 (InterPro:IPR006927); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF639) (TAIR:AT1G48840.1); Has 140 Blast hits to 137 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 140; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68417 : 195.0) no description available & (reliability: 450.0) & (original description: Putative At1g71240, Description = BnaC06g32380D protein, PFAM = PF04842)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold70619_1520-9069' '(at2g23093 : 418.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G49310.1); Has 365 Blast hits to 362 proteins in 119 species: Archae - 0; Bacteria - 86; Metazoa - 79; Fungi - 33; Plants - 127; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|39533 : 115.0) no description available & (gnl|cdd|86904 : 88.9) no description available & (reliability: 836.0) & (original description: Putative BnaC08g34640D, Description = BnaC08g34640D protein, PFAM = PF05631)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold70750_3125-6061' '(at5g17610 : 114.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative At5g17610, Description = At5g17610, PFAM = PF16029)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold70948_1-4878' ' no hits & (original description: Putative PGSC0003DMG400008936, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold70969_1698-4348' '(at4g03170 : 90.5) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT1G20600.1); Has 166 Blast hits to 166 proteins in 36 species: Archae - 0; Bacteria - 2; Metazoa - 34; Fungi - 6; Plants - 72; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold70999_4491-7692' '(at5g07330 : 125.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G63060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative BnaC09g48550D, Description = BnaC09g48550D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold71093_2856-8958' ' no hits & (original description: Putative PGSC0003DMG401006007, Description = Putative ovule protein, PFAM = PF00538)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold71225_2908-8015' ' no hits & (original description: Putative , Description = ATP synthase subunit epsilon, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold71353_7699-8995' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold71495_3771-8966' '(at3g63500 : 565.0) Protein of unknown function (DUF1423); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423, plant (InterPro:IPR004082); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1423) (TAIR:AT1G14740.1); Has 3195 Blast hits to 2635 proteins in 392 species: Archae - 10; Bacteria - 381; Metazoa - 1310; Fungi - 308; Plants - 351; Viruses - 11; Other Eukaryotes - 824 (source: NCBI BLink). & (gnl|cdd|70683 : 470.0) no description available & (reliability: 1130.0) & (original description: Putative PVIP1, Description = Potyviral VPg interacting protein 1, PFAM = PF07227;PF16312)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold71574_2156-4942' '(at1g06660 : 137.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30820.2); Has 166 Blast hits to 144 proteins in 35 species: Archae - 0; Bacteria - 17; Metazoa - 13; Fungi - 20; Plants - 104; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative JASON, Description = Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, putative isoform 3, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold71674_260-6981' '(at5g17660 : 280.0) tRNA (guanine-N-7) methyltransferase; FUNCTIONS IN: tRNA (guanine-N7-)-methyltransferase activity; INVOLVED IN: tRNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA (guanine-N-7) methyltransferase (InterPro:IPR003358); BEST Arabidopsis thaliana protein match is: tRNA (guanine-N-7) methyltransferase (TAIR:AT5G24840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80529 : 128.0) no description available & (reliability: 560.0) & (original description: Putative trmB, Description = tRNA (guanine-N(7)-)-methyltransferase, PFAM = PF02390)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold71888_4307-8873' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold72258_5587-8273' ' no hits & (original description: Putative ch1, Description = Histone H1, PFAM = PF00538)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold72587_2485-5060' '(gnl|cdd|68427 : 235.0) no description available & (at2g42610 : 231.0) LIGHT SENSITIVE HYPOCOTYLS 10 (LSH10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT1G07090.1); Has 309 Blast hits to 309 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative LSH8, Description = Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 8, PFAM = PF04852)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold72620_1-8711' '(at1g35220 : 431.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 313 Blast hits to 185 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 200; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|38911 : 382.0) no description available & (reliability: 862.0) & (original description: Putative Sb09g017090, Description = Putative uncharacterized protein Sb09g017090, PFAM = PF14647)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold72755_1-8165' '(at3g57180 : 617.0) BRASSINAZOLE(BRZ) INSENSITIVE PALE GREEN 2 (BPG2); FUNCTIONS IN: GTP binding; INVOLVED IN: brassinosteroid mediated signaling pathway, developmental process; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G10620.1); Has 5185 Blast hits to 4152 proteins in 947 species: Archae - 97; Bacteria - 1334; Metazoa - 1316; Fungi - 649; Plants - 254; Viruses - 94; Other Eukaryotes - 1441 (source: NCBI BLink). & (gnl|cdd|36463 : 410.0) no description available & (gnl|cdd|57926 : 173.0) no description available & (q6ypg5|nos_orysa : 95.9) Putative nitric-oxide synthase (EC 1.14.13.39) - Oryza sativa (Rice) & (reliability: 1234.0) & (original description: Putative BPG2, Description = GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic, PFAM = PF01926)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold72911_7066-8649' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Retrovirus-related Pol polyprotein LINE-1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold73205_112-2324' '(at1g79260 : 152.0) CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1794 (InterPro:IPR014878); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87641 : 103.0) no description available & (reliability: 304.0) & (original description: Putative IDP748, Description = Putative uncharacterized protein Sb03g031180, PFAM = PF08768)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold73249_1-4212' ' no hits & (original description: Putative , Description = , PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold73498_1-2618' '(at3g11810 : 177.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G03330.1); Has 141 Blast hits to 141 proteins in 21 species: Archae - 0; Bacteria - 9; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative BnaA09g19250D, Description = BnaA09g19250D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold73569_985-3656' ' no hits & (original description: Putative , Description = , PFAM = PF07939)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold73893_1-2574' ' (original description: Putative , Description = , PFAM = PF03108)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold73902_190-8048' '(at3g45750 : 185.0) Nucleotidyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT3G45760.1). & (gnl|cdd|37488 : 113.0) no description available & (gnl|cdd|34857 : 90.4) no description available & (reliability: 370.0) & (original description: Putative At3g45760, Description = Nucleotidyltransferase family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold74038_1047-3802' ' no hits & (original description: Putative PGSC0003DMG400017835, Description = , PFAM = PF14364;PF05553)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold74214_2141-4821' ' no hits & (original description: Putative , Description = , PFAM = PF03242)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold74420_4547-8302' ' no hits & (original description: Putative PGSC0003DMG400030244, Description = , PFAM = PF14383)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold74772_29-2466' ' (original description: Putative corC, Description = Lipid transfer protein, PFAM = PF14547)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold74860_1-8028' ' no hits & (original description: Putative , Description = , PFAM = PF08284;PF00098)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold74860_6549-8208' ' no hits & (original description: Putative , Description = , PFAM = PF00098)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold74884_1776-6607' '(at1g36320 : 288.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37920.1); Has 93 Blast hits to 90 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 576.0) & (original description: Putative At1g36320, Description = Plant/F7F23-4 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold74917_998-4092' '(at3g08600 : 180.0) Protein of unknown function (DUF1191); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1191 (InterPro:IPR010605); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1191) (TAIR:AT4G22900.1); Has 124 Blast hits to 124 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70178 : 154.0) no description available & (reliability: 360.0) & (original description: Putative 4B, Description = Plant/F17O14-7 protein, PFAM = PF06697)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold74932_4568-8194' '(at2g34070 : 198.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 37 (TBL37); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 38 (TAIR:AT1G29050.1); Has 1344 Blast hits to 1324 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1342; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative gal2, Description = Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold75043_1067-4369' ' no hits & (original description: Putative hAT1, Description = Ac-like transposase, PFAM = PF05699)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold75072_1764-8162' '(at5g13030 : 932.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0061 (InterPro:IPR003846); Has 5046 Blast hits to 4997 proteins in 1211 species: Archae - 8; Bacteria - 2327; Metazoa - 120; Fungi - 134; Plants - 48; Viruses - 0; Other Eukaryotes - 2409 (source: NCBI BLink). & (gnl|cdd|80459 : 549.0) no description available & (gnl|cdd|37753 : 434.0) no description available & (reliability: 1864.0) & (original description: Putative selo, Description = Selenoprotein O, PFAM = PF02696)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold75142_347-8147' ' no hits & (original description: Putative PGSC0003DMG400027948, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold75207_5739-8133' '(gnl|cdd|71235 : 172.0) no description available & (at5g22930 : 133.0) Protein of unknown function (DUF1635); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1635 (InterPro:IPR012862); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1635) (TAIR:AT3G44940.1); Has 97 Blast hits to 97 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative PGSC0003DMG400000415, Description = DUF1635 family protein, PFAM = PF07795)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold75254_2683-6627' '(at2g33180 : 151.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative At2g33180, Description = BnaA04g19200D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold75319_2869-6263' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold75340_1-6154' '(at2g46980 : 121.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown. & (reliability: 242.0) & (original description: Putative PGSC0003DMG400001122, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold75530_904-4564' ' no hits & (original description: Putative AGP20, Description = Arabinogalactan peptide 20, PFAM = PF06376)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold75544_4894-8005' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold75544_5716-8045' ' no hits & (original description: Putative , Description = Zinc finger containing preotein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold75605_4882-8041' ' no hits & (original description: Putative , Description = Folylpoly-gamma-glutamate synthetase, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold75678_818-5984' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold75886_1412-3963' ' no hits & (original description: Putative VQ11, Description = VQ motif-containing protein 11, PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold75934_6135-7979' '(at3g59840 : 113.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 72 Blast hits to 72 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative Sb09g024670, Description = Putative uncharacterized protein Sb09g024670, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold75981_896-6028' '(at2g12400 : 483.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25270.1); Has 177 Blast hits to 172 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 966.0) & (original description: Putative si945024a02, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold76094_1-1505' ' no hits & (original description: Putative str246N, Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold76176_1045-3734' ' no hits & (original description: Putative glysoja_030340, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold76194_816-4158' ' no hits & (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold76302_1-2119' ' no hits & (original description: Putative , Description = , PFAM = PF00498)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold76490_3066-6524' '(at2g32280 : 179.0) Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT4G21310.1); Has 170 Blast hits to 169 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative At2g32280, Description = At2g32280, PFAM = PF06749)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold76513_8792-11508' '(q8lhp0|elof1_orysa : 130.0) Transcription elongation factor 1 homolog - Oryza sativa (Rice) & (at5g46030 : 118.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF701, zinc-binding putative (InterPro:IPR007808); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38424 : 110.0) no description available & (gnl|cdd|34497 : 84.7) no description available & (reliability: 236.0) & (original description: Putative Os07g0631100, Description = Transcription elongation factor 1 homolog, PFAM = PF05129)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold76641_1748-7204' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold76724_1-2134' ' no hits & (original description: Putative , Description = , PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold76740_4573-7817' '(at5g04010 : 97.8) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03920.1); Has 37 Blast hits to 37 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative , Description = , PFAM = PF00646)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold76777_712-3299' '(at3g55820 : 128.0) Fasciclin-like arabinogalactan family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); Has 34 Blast hits to 34 proteins in 13 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative PGSC0003DMG400016017, Description = Fasciclin domain-containing protein, putative isoform 1, PFAM = PF02469)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold76826_2299-4773' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold76993_3345-5566' '(at5g41761 : 86.3) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold77102_2598-7284' ' no hits & (original description: Putative , Description = Sterile alpha motif domain-containing protein isoform 1, PFAM = PF00536)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold77154_1-5328' '(at1g15215 : 199.0) BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative SHH1, Description = Protein SAWADEE HOMEODOMAIN HOMOLOG 1, PFAM = PF16719)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold77200_955-5855' '(gnl|cdd|69184 : 128.0) no description available & (at5g49540 : 118.0) Rab5-interacting family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF786 (InterPro:IPR008504); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39656 : 113.0) no description available & (reliability: 236.0) & (original description: Putative At5g49540, Description = AT5g49540/K6M13_9, PFAM = PF07019)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold77333_1-4571' '(at4g35760 : 233.0) Encodes a bimodular enzyme comprising an integral domain homologous to the catalytic subunit of mammalian vitamin K epoxide reductase (VKORC1, EC 1.1.4.1) that is fused to a soluble thioredoxin-like moiety. Using yeast microsomes as a recombinant system, it was shown that the VKORC1 domain of At4g35760 functions as a stringent naphthoquinone reductase, and that its reduced Trx-like partner can serve as its electron donor. Located in plastid.; NAD(P)H dehydrogenase (quinone)s; FUNCTIONS IN: NAD(P)H dehydrogenase (quinone) activity; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vitamin K epoxide reductase (InterPro:IPR012932), Thioredoxin-like fold (InterPro:IPR012336); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87393 : 94.9) no description available & (reliability: 466.0) & (original description: Putative VKOR, Description = Vitamin K epoxide reductase, PFAM = PF07884)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold77467_1-7670' '(at5g04480 : 1079.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biosynthetic process; LOCATED IN: Golgi apparatus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: glycosyl transferase family 1 protein (TAIR:AT4G01210.1). & (reliability: 2158.0) & (original description: Putative At5g04480, Description = AT5g04480/T32M21_80, PFAM = PF00534)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold77792_3290-5823' '(at4g35320 : 84.3) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold77910_913-5475' ' no hits & (original description: Putative PGSC0003DMG400013106, Description = Putative ovule protein, PFAM = PF02362)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold78058_1750-6167' '(at1g12380 : 987.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62870.1); Has 173 Blast hits to 170 proteins in 34 species: Archae - 0; Bacteria - 4; Metazoa - 25; Fungi - 8; Plants - 123; Viruses - 7; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 1974.0) & (original description: Putative Sb04g014800, Description = Putative uncharacterized protein Sb04g014800, PFAM = PF04937)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold78241_515-5374' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold78311_1572-7501' '(at3g04020 : 148.0) unknown protein; Has 26 Blast hits to 25 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative pco085724, Description = BnaA05g37370D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold78314_1-7501' ' no hits & (original description: Putative , Description = , PFAM = PF07741)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold78425_3083-5460' '(at1g27290 : 112.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative BnaAnng21740D, Description = BnaAnng21740D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold78436_1858-7478' '(at1g36320 : 493.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37920.1); Has 93 Blast hits to 90 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 986.0) & (original description: Putative At4g37920, Description = Uncharacterized protein At4g37920, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold78436_2399-7259' '(at1g36320 : 402.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37920.1); Has 93 Blast hits to 90 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 804.0) & (original description: Putative At1g36320, Description = Plant/F7F23-4 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold78609_1-5303' ' no hits & (original description: Putative PGSC0003DMG402010824, Description = BnaC09g52720D protein, PFAM = PF09805)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold78770_1198-6845' '(at4g28210 : 291.0) embryo defective 1923 (emb1923); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 582.0) & (original description: Putative emb1923, Description = At4g28210, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold78829_5615-7397' ' no hits & (original description: Putative , Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold78831_1-2244' ' no hits & (original description: Putative AN1, Description = Zinc finger A20 and AN1 domain-containing stress-associated protein 11, PFAM = PF01428)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold78833_3441-7396' ' (original description: Putative SRP19, Description = Signal recognition particle 19 kDa protein, PFAM = PF01922)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold78930_4272-6757' ' no hits & (original description: Putative OFP9, Description = AtOFP9, PFAM = PF04844)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold78935_2762-6692' '(at1g21830 : 103.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G44608.1); Has 49 Blast hits to 49 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative , Description = , PFAM = PF05340)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold78951_1-7371' '(at1g59520 : 277.0) Encodes CW7.; CW7; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2045 (InterPro:IPR019141); Has 145 Blast hits to 144 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 91; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|37676 : 205.0) no description available & (reliability: 554.0) & (original description: Putative T4M14.9, Description = Putative uncharacterized protein T4M14.9, PFAM = PF09741)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold79179_1675-5838' '(at1g65420 : 138.0) Chloroplast localized YCF20-like gene involved in nonphotochemical quenching. Has overlapping functions with npq6.; NONPHOTOCHEMICAL QUENCHING 7 (NPQ7); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF565 (InterPro:IPR007572); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF565) (TAIR:AT3G56830.1); Has 195 Blast hits to 195 proteins in 63 species: Archae - 0; Bacteria - 57; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|68068 : 83.4) no description available & (reliability: 276.0) & (original description: Putative ycf20, Description = Uncharacterized protein ycf20, PFAM = PF04483)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold79320_3720-6887' '(at4g16580 : 367.0) Protein phosphatase 2C family protein; FUNCTIONS IN: phosphoprotein phosphatase activity, catalytic activity; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Sporulation stage II, protein E C-terminal (InterPro:IPR010822); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66720.1); Has 838 Blast hits to 828 proteins in 210 species: Archae - 0; Bacteria - 2; Metazoa - 184; Fungi - 235; Plants - 232; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (gnl|cdd|36593 : 281.0) no description available & (reliability: 734.0) & (original description: Putative gpm564, Description = Protein phosphatase 2c, putative, PFAM = PF07228)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold79571_4371-7243' ' (original description: Putative squa, Description = FRUITFULL-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold79746_1-7207' ' no hits & (original description: Putative ELF5, Description = WW domain-binding protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold79854_3320-6866' ' no hits & (original description: Putative Os03g0581800, Description = Os03g0581800 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold80021_1-2218' '(at4g27745 : 178.0) Yippee family putative zinc-binding protein; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: Yippee family putative zinc-binding protein (TAIR:AT5G53940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66871 : 140.0) no description available & (gnl|cdd|38609 : 137.0) no description available & (q8s5m8|yipl_orysa : 122.0) Putative yippee-like protein Os10g0369500 - Oryza sativa (Rice) & (reliability: 356.0) & (original description: Putative ypel, Description = Protein yippee-like, PFAM = PF03226)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold80126_141-3296' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold80362_2344-8620' '(at4g32960 : 206.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32970.1); Has 106 Blast hits to 106 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative At4g32960, Description = At4g32960, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold80645_600-7034' '(at5g66470 : 461.0) RNA binding;GTP binding; FUNCTIONS IN: RNA binding, GTP binding; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 2 (InterPro:IPR004044), K Homology, prokaryotic type (InterPro:IPR009019), Small GTP-binding protein (InterPro:IPR005225), GTP1/OBG (InterPro:IPR006073), GTP-binding protein Era (InterPro:IPR005662), GTP-binding protein, HSR1-related (InterPro:IPR002917), K homology-like, alpha/beta (InterPro:IPR015946); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT1G30960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80503 : 348.0) no description available & (gnl|cdd|36637 : 321.0) no description available & (reliability: 922.0) & (original description: Putative era, Description = GTPase Era, PFAM = PF07650;PF01926)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold81169_1674-4789' ' no hits & (original description: Putative , Description = , PFAM = PF14111)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold81171_1-5650' '(at4g27010 : 160.0) INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72270.1); Has 312 Blast hits to 226 proteins in 103 species: Archae - 0; Bacteria - 2; Metazoa - 129; Fungi - 90; Plants - 83; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold81175_2540-5547' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold81363_1-2108' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold81661_1245-6269' ' no hits & (original description: Putative PGSC0003DMG400005834, Description = Arabinogalactan protein 22, PFAM = PF06376)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold81673_1-6387' '(at5g23850 : 630.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF821) (TAIR:AT3G48980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|69222 : 630.0) no description available & (gnl|cdd|37669 : 577.0) no description available & (reliability: 1260.0) & (original description: Putative duf821, Description = DUF821, PFAM = PF05686)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold81949_679-11548' '(at5g22450 : 365.0) unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 730.0) & (original description: Putative , Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold81951_1735-4271' '(at5g24600 : 216.0) Protein of unknown function, DUF599; INVOLVED IN: biological_process unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF599 (InterPro:IPR006747); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF599 (TAIR:AT3G18215.1). & (gnl|cdd|68233 : 166.0) no description available & (reliability: 432.0) & (original description: Putative PGSC0003DMG400034106, Description = Uncharacterized protein isoform 1, PFAM = PF04654)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold82145_2946-6245' ' no hits & (original description: Putative BnaA07g31240D, Description = BnaA07g31240D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold82600_1113-6670' '(at4g38500 : 738.0) Protein of unknown function (DUF616); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF616 (InterPro:IPR006852); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF616) (TAIR:AT1G28240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68342 : 429.0) no description available & (reliability: 1476.0) & (original description: Putative At4g38500, Description = AT4g38500/F20M13_60, PFAM = PF04765)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold82775_2348-5760' '(at5g64130 : 132.0) cAMP-regulated phosphoprotein 19-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: cAMP-regulated phosphoprotein/endosulphine conserved region (InterPro:IPR006760); BEST Arabidopsis thaliana protein match is: cAMP-regulated phosphoprotein 19-related protein (TAIR:AT1G69510.2); Has 149 Blast hits to 149 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|71283 : 96.4) no description available & (reliability: 264.0) & (original description: Putative At5g64130, Description = cAMP-regulated phosphoprotein-like protein, PFAM = PF04667)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold82872_1-2593' ' no hits & (original description: Putative Os10g0106900, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold82946_1-5177' '(at2g27430 : 360.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G31890.2); Has 565 Blast hits to 559 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 7; Plants - 536; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 720.0) & (original description: Putative Os05g0573800, Description = Os05g0573800 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold83479_1311-6514' ' no hits & (original description: Putative , Description = PPPDE thiol peptidase family protein, putative isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold83864_1-5650' ' no hits & (original description: Putative PGSC0003DMG400014614, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold84367_2476-5243' '(at3g12410 : 103.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G12460.1); Has 208 Blast hits to 196 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 197; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|39574 : 93.6) no description available & (reliability: 206.0) & (original description: Putative Sb03g030200, Description = Putative uncharacterized protein Sb03g030200, PFAM = PF01612)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold84377_1325-6360' '(at3g07660 : 111.0) Kinase-related protein of unknown function (DUF1296); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1296 (InterPro:IPR009719); BEST Arabidopsis thaliana protein match is: Kinase-related protein of unknown function (DUF1296) (TAIR:AT3G13990.1); Has 3086 Blast hits to 1914 proteins in 327 species: Archae - 2; Bacteria - 372; Metazoa - 1089; Fungi - 466; Plants - 245; Viruses - 13; Other Eukaryotes - 899 (source: NCBI BLink). & (gnl|cdd|70439 : 103.0) no description available & (reliability: 222.0) & (original description: Putative At1g29350, Description = Plant/MDC16-11 protein, PFAM = PF06972)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold84439_1024-6180' '(at5g57770 : 318.0) CONTAINS InterPro DOMAIN/s: Pleckstrin-like, plant (InterPro:IPR013666), Protein of unknown function DUF828 (InterPro:IPR008546); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region (TAIR:AT3G22810.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69238 : 99.8) no description available & (reliability: 636.0) & (original description: Putative Sb06g021500, Description = Putative uncharacterized protein Sb06g021500, PFAM = PF08458;PF05703)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold84495_190-6292' '(at2g12400 : 546.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25270.1); Has 177 Blast hits to 172 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 1092.0) & (original description: Putative BnaC09g08450D, Description = BnaC09g08450D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold84895_1080-4466' ' no hits & (original description: Putative PGSC0003DMG400015791, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold84969_1-2876' ' no hits & (original description: Putative , Description = , PFAM = PF13359)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold85367_394-3962' ' no hits & (original description: Putative At4g33740, Description = Putative myb-like protein X-like, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold85627_470-4478' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold85666_2427-6141' '(at2g41640 : 538.0) Glycosyltransferase family 61 protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyltransferase AER61, uncharacterised (InterPro:IPR007657); BEST Arabidopsis thaliana protein match is: Glycosyltransferase family 61 protein (TAIR:AT3G57380.1). & (gnl|cdd|39896 : 366.0) no description available & (gnl|cdd|68160 : 276.0) no description available & (reliability: 1076.0) & (original description: Putative a1, Description = Glycosyltransferase, PFAM = PF04577)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold85771_1-2497' ' no hits & (original description: Putative PGSC0003DMG400014551, Description = Copper-binding periplasmic protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold85794_1811-6122' '(at1g23790 : 463.0) Plant protein of unknown function (DUF936); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF936, plant (InterPro:IPR010341); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF936) (TAIR:AT1G70340.1); Has 265 Blast hits to 216 proteins in 30 species: Archae - 0; Bacteria - 7; Metazoa - 9; Fungi - 7; Plants - 237; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|69589 : 242.0) no description available & (reliability: 926.0) & (original description: Putative ARALYDRAFT_676550, Description = Predicted protein, PFAM = PF06075;PF06075)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold85870_929-3279' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Putative reverse transcriptase family member, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold85895_1864-5286' ' no hits & (original description: Putative GRP, Description = Glycine-rich protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold86075_392-3289' ' no hits & (original description: Putative PGSC0003DMG400003725, Description = 5'-3' exoribonuclease 3, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold86185_2625-5122' ' no hits & (original description: Putative , Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold86215_1-2418' '(at4g22970 : 216.0) Encodes a separase (ESP), homologous to human and mouse separase protein. Separase is a capase family protease required for the release of sister chromatid cohesion during meiosis and mitosis. Arabidopsis separase contains a predicted 2Fe2S-ferredoxin domain that is not present in the proteins of other organisms. Also contains a putative EF-hand calcium binding domain. Mutant seeds exhibited embryo arrest at the globular stage. The endosperm also exhibited a weak titan-like phenotype. Transgenic plants expressing AESP RNA interference (RNAi) from the meiosis-specific DMC1 promoter exhibited alterations in chromosome segregation during meiosis I and II that resulted in polyads containing from one to eight microspores. Plays an essential role in embryo development. Required for the removal of cohesin from meiotic chromosomes and establishment of meiotic nuclear domains. This gene was also identified through the rsw4 mutant. Lines carrying recessive, temperature-sensitive mutations exhibit reduced anisotropic growth at 30 degrees Celsius. Microtubules and cellulose microfibrils are not depleted or disoriented in the mutants at the restrictive temperature.; homolog of separase (ESP); FUNCTIONS IN: peptidase activity; INVOLVED IN: meiotic chromosome separation, chromosome separation, embryo development ending in seed dormancy, positive regulation of sister chromatid cohesion, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C50, separase (InterPro:IPR005314); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28550.1). & (gnl|cdd|34756 : 130.0) no description available & (reliability: 432.0) & (original description: Putative bimB, Description = Separin, PFAM = PF03568)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold86339_229-5607' '(at5g14310 : 401.0) carboxyesterase 16 (CXE16); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36728 : 141.0) no description available & (gnl|cdd|87389 : 112.0) no description available & (q6l545|gid1_orysa : 82.8) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 802.0) & (original description: Putative CXE7, Description = Putative carboxylesterase 11, PFAM = PF07859)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold86342_996-6026' '(at2g48060 : 546.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, sperm cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341 proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa - 318; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|37104 : 171.0) no description available & (reliability: 1092.0) & (original description: Putative Sb03g018910, Description = Putative uncharacterized protein Sb03g018910, PFAM = PF12166)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold86510_1643-5124' ' no hits & (original description: Putative , Description = , PFAM = PF13976)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold86537_4027-5989' ' no hits & (original description: Putative orf112a, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold86888_2146-5935' '(at3g06035 : 209.0) Glycoprotein membrane precursor GPI-anchored; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Glycoprotein membrane precursor GPI-anchored (TAIR:AT5G19250.1); Has 86 Blast hits to 85 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 418.0) & (original description: Putative At3g06035, Description = Uncharacterized GPI-anchored protein At3g06035, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold86899_1654-4218' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold87088_592-4763' '(at5g09960 : 99.4) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 198.8) & (original description: Putative At5g09960, Description = At5g09960, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold87268_1108-4759' '(at1g19330 : 186.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75060.1). & (reliability: 372.0) & (original description: Putative Bathy10g03180, Description = , PFAM = PF13867)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold87280_2159-4464' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold87444_1-2900' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold87719_2217-4756' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold87852_1-4660' '(at4g35730 : 297.0) Regulator of Vps4 activity in the MVB pathway protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061); BEST Arabidopsis thaliana protein match is: Regulator of Vps4 activity in the MVB pathway protein (TAIR:AT1G34220.2); Has 794 Blast hits to 754 proteins in 186 species: Archae - 0; Bacteria - 4; Metazoa - 200; Fungi - 205; Plants - 312; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|37238 : 223.0) no description available & (gnl|cdd|67036 : 174.0) no description available & (reliability: 594.0) & (original description: Putative pco144644, Description = Regulator of Vps4 activity in the MVB pathway protein, PFAM = PF03398)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold88245_1-2699' '(at3g57990 : 247.0) unknown protein; Has 1497 Blast hits to 1323 proteins in 52 species: Archae - 0; Bacteria - 4; Metazoa - 23; Fungi - 34; Plants - 61; Viruses - 0; Other Eukaryotes - 1375 (source: NCBI BLink). & (reliability: 494.0) & (original description: Putative PGSC0003DMG400023673, Description = Putative uncharacterized protein At3g57990, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold88694_261-5413' '(at4g35980 : 114.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold89210_2706-5231' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold89834_3473-5465' ' no hits & (original description: Putative At2g06320, Description = Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold90322_2258-5392' ' no hits & (original description: Putative PGSC0003DMG400012032, Description = Os07g0599700 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold90369_1-4983' ' no hits & (original description: Putative PGSC0003DMG400010668, Description = Putative ovule protein, PFAM = PF02362)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold90552_186-5623' '(at3g11570 : 474.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 8 (TBL8); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 9 (TAIR:AT5G06230.1); Has 1362 Blast hits to 1341 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 6; Plants - 1353; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|72785 : 141.0) no description available & (reliability: 948.0) & (original description: Putative TBL8, Description = Protein trichome birefringence-like 8, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold90670_1-5332' '(at1g06510 : 86.7) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 376 Blast hits to 369 proteins in 152 species: Archae - 5; Bacteria - 113; Metazoa - 105; Fungi - 46; Plants - 27; Viruses - 2; Other Eukaryotes - 78 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative Os01g0696000, Description = Os01g0696000 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold91111_2211-4229' ' no hits & (original description: Putative PGSC0003DMG400004935, Description = Putative prothymosin alpha-B-like, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold91405_1-1101' ' no hits & (original description: Putative PGSC0003DMG400025347, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold91773_1457-4763' ' no hits & (original description: Putative PGSC0003DMG400006531, Description = EDNR2GH3 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold91903_1-1881' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold92521_94-4428' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold92525_1589-4339' ' no hits & (original description: Putative PGSC0003DMG400013529, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold92593_616-3251' '(at3g50780 : 237.0) BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G63850.1); Has 298 Blast hits to 298 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 287; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 474.0) & (original description: Putative At3g50780, Description = BTB/POZ domain-containing protein At3g50780, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold92706_1150-5018' '(at4g25770 : 93.6) alpha/beta-Hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G10040.1). & (reliability: 187.2) & (original description: Putative Sb04g035350, Description = Putative uncharacterized protein Sb04g035350, PFAM = PF05057)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold92791_1-4726' ' no hits & (original description: Putative , Description = Helicase-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold93040_2495-4968' '(at4g22190 : 159.0) unknown protein; Has 283 Blast hits to 154 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 24; Fungi - 12; Plants - 48; Viruses - 0; Other Eukaryotes - 197 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative TCM_030308, Description = Serine/arginine repetitive matrix protein 2, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold93104_2116-4959' '(at2g30990 : 189.0) Protein of unknown function (DUF688); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF688) (TAIR:AT1G29240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68662 : 106.0) no description available & (reliability: 378.0) & (original description: Putative , Description = Transcription initiation factor TFIID subunit 11, putative, PFAM = PF05097)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold93489_2386-4905' '(at4g37420 : 439.0) Domain of unknown function (DUF23); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF23) (TAIR:AT5G40720.1); Has 241 Blast hits to 241 proteins in 76 species: Archae - 0; Bacteria - 129; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85620 : 104.0) no description available & (reliability: 878.0) & (original description: Putative BnaA01g00530D, Description = BnaA01g00530D protein, PFAM = PF01697)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold93653_10-4879' ' no hits & (original description: Putative LOC100281249, Description = Putative ovule protein, PFAM = PF01363)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold93813_1816-4855' ' (original description: Putative , Description = OSJNBa0081G05.10 protein, PFAM = PF02992;PF02992)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold94495_437-2775' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold94507_2598-4755' ' no hits & (original description: Putative PGSC0003DMG400016351, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold94534_1-4751' '(at3g17300 : 144.0) unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35 Blast hits to 35 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative , Description = , PFAM = PF05347)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold94709_1612-4020' '(at5g23100 : 249.0) Protein of unknown function, DUF617; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF617, plant (InterPro:IPR006460); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF617 (TAIR:AT3G25640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68336 : 223.0) no description available & (reliability: 498.0) & (original description: Putative MIZ1, Description = BnaA06g33470D protein, PFAM = PF04759)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold94865_1-3840' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold95357_1-2803' '(at1g32583 : 80.5) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: tapetum determinant 1 (TAIR:AT4G24972.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold95792_676-3998' ' no hits & (original description: Putative , Description = , PFAM = PF13912;PF13912;PF13912)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold95945_785-4437' ' (original description: Putative ERF3, Description = Ethylene response factor 3, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold96314_652-4511' '(at4g31080 : 151.0) Protein of unknown function (DUF2296); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2296 (InterPro:IPR019273); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF2296) (TAIR:AT2G24330.1). & (reliability: 302.0) & (original description: Putative At2g24330, Description = Protein lunapark, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold96447_1-4494' '(at1g50900 : 216.0) Ankyrin repeat family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); Has 55 Blast hits to 55 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative GDC1, Description = Protein LHCP TRANSLOCATION DEFECT, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold96688_345-3527' ' no hits & (original description: Putative Os07g0657600, Description = DNA glycosylase, PFAM = PF00730)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold96702_2374-4459' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold96902_1519-4115' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold97156_1-3014' ' no hits & (original description: Putative PGSC0003DMG400019330, Description = FASCICLIN-like arabinogalactan protein 21, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold97433_1-2142' ' no hits & (original description: Putative , Description = , PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold98048_1114-3488' ' no hits & (original description: Putative orf125, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold98125_1472-4274' ' no hits & (original description: Putative AGP22, Description = Arabinogalactan peptide 22, PFAM = PF06376)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold98424_156-4233' '(at3g11760 : 128.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative , Description = , PFAM = PF10358)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold99017_2655-4161' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold99328_1-1973' ' no hits & (original description: Putative PGSC0003DMG400001476, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold99432_1-3355' ' no hits & (original description: Putative PGSC0003DMG400000414, Description = BnaCnng10160D protein, PFAM = PF07557)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold99512_873-4084' ' no hits & (original description: Putative Dif54, Description = BnaA07g31240D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold99605_1546-4094' ' (original description: Putative PGSC0003DMG400014084, Description = ABI five-binding protein, PFAM = PF16135)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold99623_1499-3936' ' no hits & (original description: Putative PGSC0003DMG400005986, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold100084_32-4032' ' no hits & (original description: Putative PGSC0003DMG400016410, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold100196_558-4018' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold100221_1208-4014' ' no hits & (original description: Putative PGSC0003DMG400014888, Description = Putative pol protein, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold100271_1-2479' '(at4g15840 : 236.0) BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); Has 3394 Blast hits to 3343 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 3006; Fungi - 79; Plants - 135; Viruses - 80; Other Eukaryotes - 94 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative F383_14790, Description = Transmembrane protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold100730_1-1391' ' no hits & (original description: Putative BnaC05g30360D, Description = BnaA05g17390D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold100738_1064-3866' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold100789_1-3943' '(at5g65740 : 290.0) zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Fanconi anemia complex, subunit FancL, WD-repeat region (InterPro:IPR019162). & (gnl|cdd|38478 : 184.0) no description available & (reliability: 580.0) & (original description: Putative At5g65740, Description = Zinc ion binding protein, PFAM = PF11793;PF09765)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold100806_1816-3941' ' no hits & (original description: Putative BnaC06g21340D, Description = BnaC06g21340D protein, PFAM = PF12609)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold100859_754-2918' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold101076_1-1269' ' no hits & (original description: Putative , Description = DNA/RNA polymerases superfamily protein, PFAM = PF03732)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold101266_1-3812' '(at5g64400 : 101.0) BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT5G09570.1); Has 127 Blast hits to 125 proteins in 40 species: Archae - 0; Bacteria - 9; Metazoa - 16; Fungi - 2; Plants - 64; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative , Description = , PFAM = PF06747)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold101349_558-2902' '(at1g17455 : 143.0) ELF4-like 4 (ELF4-L4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1313 (InterPro:IPR009741); BEST Arabidopsis thaliana protein match is: ELF4-like 2 (TAIR:AT1G72630.1); Has 149 Blast hits to 148 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 148; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|70474 : 123.0) no description available & (reliability: 286.0) & (original description: Putative EFL4, Description = Protein ELF4-LIKE 4, PFAM = PF07011)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold101645_184-3269' ' no hits & (original description: Putative At2g06320, Description = Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold102039_608-3204' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold102075_500-3065' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold102260_800-3319' ' no hits & (original description: Putative LOC100282825, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold102669_1-2261' '(at5g25500 : 306.0) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 612.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold103126_1-2250' '(at2g30000 : 165.0) PHF5-like protein; CONTAINS InterPro DOMAIN/s: PHF5-like (InterPro:IPR005345); BEST Arabidopsis thaliana protein match is: PHF5-like protein (TAIR:AT1G07170.3); Has 420 Blast hits to 420 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 129; Fungi - 128; Plants - 86; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|36917 : 152.0) no description available & (gnl|cdd|67286 : 146.0) no description available & (reliability: 330.0) & (original description: Putative ini1, Description = PHD finger-like domain-containing protein 5A, PFAM = PF03660)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold103241_1-1630' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold103571_1965-3613' '(at3g10020 : 90.9) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative T22K18.16, Description = AT3g10020/T22K18_16, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold104647_202-3092' '(at4g35680 : 131.0) Arabidopsis protein of unknown function (DUF241); LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01590.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66742 : 128.0) no description available & (reliability: 262.0) & (original description: Putative PGSC0003DMG400001543, Description = , PFAM = PF03087)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold105155_1139-3441' '(at1g70230 : 237.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 27 (TBL27); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 25 (TAIR:AT1G01430.1); Has 1336 Blast hits to 1321 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1329; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|72785 : 137.0) no description available & (reliability: 474.0) & (original description: Putative AXY4, Description = Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein, PFAM = PF13839)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold105296_1-1833' ' no hits & (original description: Putative , Description = , PFAM = PF04570)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold105503_1-3403' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold105743_1-2418' ' no hits & (original description: Putative PGSC0003DMG400014888, Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, putative, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold105751_1-3377' '(at2g43110 : 136.0) unknown protein; Has 212 Blast hits to 211 proteins in 96 species: Archae - 0; Bacteria - 6; Metazoa - 62; Fungi - 91; Plants - 31; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative , Description = DEAD-box helicase family protein, PFAM = PF14617)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold106540_205-2720' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold107082_148-3235' '(at2g34570 : 218.0) maternal effect embryo arrest 21 (MEE21); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF652 (InterPro:IPR006984); Has 718 Blast hits to 716 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 246; Fungi - 251; Plants - 108; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|38374 : 167.0) no description available & (reliability: 436.0) & (original description: Putative Y6a, Description = Putative uncharacterized protein Y6a, PFAM = PF04900)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold107652_1-2404' ' no hits & (original description: Putative , Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold107855_1-2442' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold109418_1-3004' '(at5g11550 : 172.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 26 (TAIR:AT1G49780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold109811_1517-2964' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold110028_297-2927' ' no hits & (original description: Putative PGSC0003DMG400018667, Description = Alpha/gamma-adaptin-binding protein p34, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold110190_1544-2930' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold110225_743-2926' ' no hits & (original description: Putative PGSC0003DMG400043768, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold110462_243-2905' '(at5g42330 : 100.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold110594_1-2664' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold110756_1-2562' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold110990_1-2048' '(at1g03270 : 115.0) CBS domain-containing protein with a domain of unknown function (DUF21); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein with a domain of unknown function (DUF21) (TAIR:AT4G14240.1); Has 10325 Blast hits to 10105 proteins in 2459 species: Archae - 102; Bacteria - 7685; Metazoa - 330; Fungi - 275; Plants - 225; Viruses - 0; Other Eukaryotes - 1708 (source: NCBI BLink). & (gnl|cdd|37329 : 95.9) no description available & (reliability: 230.0) & (original description: Putative CNNM, Description = DUF21 domain-containing protein, PFAM = PF01595)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold111074_1-1498' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold111567_1-1833' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold111574_1-2805' '(at2g30900 : 103.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 43 (TBL43); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 42 (TAIR:AT1G78710.1); Has 1340 Blast hits to 1315 proteins in 29 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 1338; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative , Description = , PFAM = PF13839)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold111992_1279-2769' ' no hits & (original description: Putative ATRX, Description = Transcriptional regulator ATRX, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold112007_1-1607' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold113457_1-2324' ' no hits & (original description: Putative PGSC0003DMG400029579, Description = , PFAM = PF07839)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold113739_91-2622' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold113948_1473-2608' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold114291_1-2533' ' no hits & (original description: Putative aadA, Description = Streptomycin 3''-adenylyltransferase, PFAM = PF01909;PF13427)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold114463_1-2569' ' (original description: Putative NOI, Description = RPM1-interacting protein 4 (RIN4) family protein isoform 2, PFAM = PF05627)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold114482_1045-2568' ' (original description: Putative rpl10, Description = Ribosomal protein L10, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold115315_1-1365' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold115502_200-2493' ' no hits & (original description: Putative NbARP, Description = Putative ROX1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold116564_1-2417' '(at5g12010 : 600.0) unknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39785 : 229.0) no description available & (reliability: 1200.0) & (original description: Putative Sb03g026050, Description = Putative uncharacterized protein Sb03g026050, PFAM = PF13359)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold116660_356-2408' ' (original description: Putative sph1, Description = S-protein homologue, PFAM = PF05938)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold116837_1-2396' '(at5g47480 : 243.0) RGPR-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RGPR-related (TAIR:AT5G47490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37124 : 104.0) no description available & (reliability: 486.0) & (original description: Putative PGSC0003DMG400014042, Description = Protein transport protein Sec16B, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold117123_514-2373' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold118872_918-2252' '(atmg00520 : 207.0) hypothetical protein; MATR; FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity; INVOLVED IN: RNA-dependent DNA replication, RNA splicing; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Intron maturase, type II (InterPro:IPR000442), RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477); BEST Arabidopsis thaliana protein match is: Intron maturase, type II family protein (TAIR:AT1G74350.1). & (gnl|cdd|39965 : 138.0) no description available & (reliability: 414.0) & (original description: Putative matR, Description = Maturase, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold119432_489-2214' ' no hits & (original description: Putative , Description = , PFAM = PF00931)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold119699_1-1787' '(at2g34050 : 137.0) INVOLVED IN: protein complex assembly; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATP11 (InterPro:IPR010591); Has 304 Blast hits to 304 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi - 112; Plants - 39; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|38491 : 108.0) no description available & (gnl|cdd|70128 : 106.0) no description available & (reliability: 274.0) & (original description: Putative At2g34050, Description = ATP11 protein, PFAM = PF06644)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold119773_14-2192' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold120250_1-1607' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold121190_1-1500' ' no hits & (original description: Putative At1g01540, Description = Putative serine/threonine-protein kinase, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold121371_588-2094' ' no hits & (original description: Putative PGSC0003DMG400014888, Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, putative, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold122263_317-2043' ' no hits & (original description: Putative PGSC0003DMG400008430, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold122869_1-1764' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold123233_1-1987' ' no hits & (original description: Putative , Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold125474_1-1870' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold128226_1-1736' ' no hits & (original description: Putative PGSC0003DMG400044492, Description = Transposon MuDR mudrA-like protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold133350_1-1525' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold133491_1-1520' ' no hits & (original description: Putative , Description = , PFAM = PF00646)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold133568_1-1518' ' no hits & (original description: Putative PGSC0003DMG400005835, Description = WRKY transcription factor-30, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold133580_1-1449' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold133668_1-1514' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold134382_1-1487' ' no hits & (original description: Putative PGSC0003DMG401000914, Description = Putative ovule protein, PFAM = PF00912)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold134628_1-1480' ' no hits & (original description: Putative YCF37, Description = At2g23670/F26B6.32, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold134805_1-1474' ' no hits & (original description: Putative rps13, Description = Ribosomal protein S13, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold137202_1-1395' ' no hits & (original description: Putative hggt, Description = HGGT, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold137480_1-1386' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold137862_277-1375' ' no hits & (original description: Putative , Description = HIP116 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold138666_182-1351' ' no hits & (original description: Putative PGSC0003DMG400028331, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold142356_1-1245' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold142788_1-1234' ' (original description: Putative At4g07810, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF07727)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold150483_1-1054' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold151150_1-1041' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Retrovirus-related Pol polyprotein LINE-1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold151922_1-1025' ' no hits & (original description: Putative PGSC0003DMG400025060, Description = , PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold152375_1-1015' ' no hits & (original description: Putative Os06g0363701, Description = Retrotransposon protein, putative, Ty1-copia subclass, PFAM = PF07727)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold153165_1-1002' ' no hits & (original description: Putative PGSC0003DMG400025386, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold154276_1-981' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold165528_1-810' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold166390_1-799' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold168465_1-772' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold169682_1-757' ' no hits & (original description: Putative PGSC0003DMG400003960, Description = UDP-D-glucuronate 4-epimerase 3, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold181804_1-619' ' no hits & (original description: Putative HM01045, Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold188591_1-567' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold206602_1-475' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold208897_1-464' ' no hits & (original description: Putative ARF2, Description = Auxin response factor, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold212057_1-448' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold216753_1-422' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold217899_1-415' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold219939_1-404' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold220309_1-402' ' (original description: Putative , Description = Transposon protein, putative, CACTA, En/Spm sub-class, PFAM = PF02992)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold220780_1-399' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold221092_1-397' ' no hits & (original description: Putative PGSC0003DMG400041501, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold222776_1-386' ' no hits & (original description: Putative , Description = Polyprotein, PFAM = PF03732)' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold230653_1-337' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.3scaffold236517_1-304' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2_1331887-1334450' '(gnl|cdd|68427 : 236.0) no description available & (at3g23290 : 223.0) LIGHT SENSITIVE HYPOCOTYLS 4 (LSH4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT2G31160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative ELE, Description = Protein ELONGATED EMPTY GLUME, PFAM = PF04852)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4_1169408-1171782' ' no hits & (original description: Putative orf125b, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4_1737483-1739827' ' no hits & (original description: Putative orf115, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5_82988-105005' '(at3g07565 : 224.0) Protein of unknown function (DUF3755); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3755 (InterPro:IPR022228); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3755) (TAIR:AT1G10820.2). & (reliability: 448.0) & (original description: Putative DRIF1, Description = DIV and RAD interacting factor 1, PFAM = PF12579)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6_1246026-1549511' '(at3g04560 : 167.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 16 growth stages; Has 227 Blast hits to 225 proteins in 83 species: Archae - 0; Bacteria - 17; Metazoa - 98; Fungi - 29; Plants - 51; Viruses - 1; Other Eukaryotes - 31 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative , Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6_1555116-1558468' '(at3g04550 : 363.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28500.1); Has 110 Blast hits to 110 proteins in 51 species: Archae - 0; Bacteria - 67; Metazoa - 1; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 726.0) & (original description: Putative RAF2, Description = Rubisco accumulation factor 2, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7_2064295-2067014' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold9_7321-10934' ' no hits & (original description: Putative NAC2, Description = NAC transcription factor, PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold9_473943-479537' '(at5g18130 : 127.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative UKP, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold9_1924953-1974521' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold10_22568-28690' '(at1g48170 : 181.0) unknown protein; Has 78 Blast hits to 78 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 30; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative BnaC06g01760D, Description = BnaC06g01760D protein, PFAM = PF16093)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold11_746437-1010649' ' no hits & (original description: Putative PMEI, Description = PGPS/D7, PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold12_1703116-1705559' ' no hits & (original description: Putative PGSC0003DMG400014888, Description = Putative pol protein, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold12_1703194-1713333' ' no hits & (original description: Putative PGSC0003DMG400014888, Description = RNA-directed DNA polymerase, putative, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold12_1703272-1706314' ' no hits & (original description: Putative PGSC0003DMG400014888, Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, putative, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold15_175291-191360' '(at3g14830 : 502.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53450.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1004.0) & (original description: Putative F383_16464, Description = ATP-dependent helicase/nuclease subunit A, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold15_1085444-1091141' ' no hits & (original description: Putative glysoja_022708, Description = , PFAM = PF11250)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold15_1085955-1219045' '(at5g43680 : 105.0) unknown protein; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 210.0) & (original description: Putative At5g43680, Description = AT5g43680/MQO24_4, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold15_1274550-1341711' '(at2g21070 : 401.0) FIONA1 (FIO1); FUNCTIONS IN: methyltransferase activity; INVOLVED IN: photoperiodism, flowering, circadian rhythm, photoperiodism; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosyl-L-methionine dependent methyltransferase, Mett10D, predicted (InterPro:IPR017182), S-adenosyl-L-methionine dependent methyltransferase, predicted (InterPro:IPR010286). & (gnl|cdd|38123 : 239.0) no description available & (gnl|cdd|86991 : 206.0) no description available & (reliability: 802.0) & (original description: Putative FIO1, Description = Methyltransferase-like protein, PFAM = PF05971;PF05971)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold18_31354-34333' '(at1g33490 : 112.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2062 (InterPro:IPR018639); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10140.1); Has 88 Blast hits to 88 proteins in 29 species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative TIDP3497, Description = Cytoplasmic membrane protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold20_327713-331133' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold22_1058377-1060952' '(at4g09660 : 87.0) CONTAINS InterPro DOMAIN/s: Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: TTF-type zinc finger protein with HAT dimerisation domain (TAIR:AT1G19260.1); Has 839 Blast hits to 796 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 438; Fungi - 0; Plants - 401; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative Os02g0234000, Description = Os02g0234000 protein, PFAM = PF14291)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold23_804417-809263' '(at1g26470 : 107.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, H4/H2A histone acetyltransferase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CT20 (InterPro:IPR012423); Has 60 Blast hits to 60 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 2; Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative Sb09g025320, Description = Putative uncharacterized protein Sb09g025320, PFAM = PF07904)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold23_910423-913839' ' no hits & (original description: Putative At1g13920, Description = BnaA06g08870D protein, PFAM = PF03763)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold23_913076-914917' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold24_411200-740630' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold26_5209-8339' ' (original description: Putative WRKY48, Description = WRKY protein, PFAM = PF03106)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold28_175141-177536' ' no hits & (original description: Putative VQ17, Description = AtVQ17, PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold28_1223087-1225972' ' no hits & (original description: Putative PGSC0003DMG400031126, Description = , PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold30_1030732-1033178' ' no hits & (original description: Putative PGSC0003DMG400026167, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold31_84404-88411' '(at5g25540 : 91.3) Expressed protein contains PAM2 PABC interacting domain.; CTC-interacting domain 6 (CID6); CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 5 (TAIR:AT5G11440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold31_1202248-1236620' ' no hits & (original description: Putative HM01045, Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold31_1209065-1213789' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold34_1305482-1308456' ' (original description: Putative m14, Description = MIKC* MADS-box transcription factor, PFAM = PF00319)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold36_420919-423425' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold36_603880-606263' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold38_605414-607828' ' no hits & (original description: Putative At5g46850, Description = Phosphatidylinositol-glycan biosynthesis class X protein, PFAM = PF08320)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold39_247064-702393' ' no hits & (original description: Putative HM01045, Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold45_327690-331036' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Retrovirus-related Pol polyprotein LINE-1, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold46_390691-393760' ' no hits & (original description: Putative , Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold46_1356674-1365331' ' no hits & (original description: Putative , Description = CASP-like protein, PFAM = PF04535)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold47_826223-828564' ' no hits & (original description: Putative orf114d, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold49_1083238-1111660' '(at3g57570 : 830.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024). & (reliability: 1660.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold51_180727-183146' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold51_220046-232287' '(at1g62250 : 301.0) unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 602.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold51_1332676-1344233' '(at1g64430 : 553.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1106.0) & (original description: Putative BnaA09g12260D, Description = BnaA09g12260D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold52_1194719-1197804' ' no hits & (original description: Putative , Description = , PFAM = PF00646;PF07734)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold53_355350-453359' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold53_1206543-1209956' '(at3g45050 : 110.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative , Description = Putative chaperone DnaJ-like, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold57_474588-477857' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold58_319916-323244' '(at4g19370 : 114.0) Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT1G31720.1); Has 77 Blast hits to 77 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative PGSC0003DMG400001952, Description = Putative ovule protein, PFAM = PF06749)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold58_330043-334615' '(at4g19390 : 197.0) Uncharacterised protein family (UPF0114); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0114, plant (InterPro:IPR016804), Uncharacterised protein family UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0114) (TAIR:AT5G13720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86300 : 108.0) no description available & (reliability: 394.0) & (original description: Putative AY107414, Description = AT4g19390/T5K18_170, PFAM = PF03350)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold58_940837-948553' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold61_506734-514753' '(at3g45050 : 112.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative , Description = Putative chaperone DnaJ-like, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold62_446376-454804' ' no hits & (original description: Putative , Description = Putative GRP family, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold65_245576-265486' ' no hits & (original description: Putative At1g69160, Description = Protein BIG GRAIN 1-like E, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold68_952740-1037474' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold76_632734-635216' ' no hits & (original description: Putative , Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold76_687081-704700' '(at5g24740 : 972.0) EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (gnl|cdd|34648 : 153.0) no description available & (gnl|cdd|37020 : 134.0) no description available & (reliability: 1944.0) & (original description: Putative At5g24740, Description = Putative uncharacterized protein Sb07g001580, PFAM = PF16909)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold78_632898-636026' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold78_633430-636107' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Retrovirus-related Pol polyprotein LINE-1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold78_1231375-1234141' ' no hits & (original description: Putative ZOSMA_5G00780, Description = Subtilisin-like serine protease 3, PFAM = PF05922)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold82_371571-376652' ' (original description: Putative speA, Description = Arginine decarboxylase, PFAM = PF03711;PF01276)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold85_792160-822991' '(at5g58410 : 1575.0) HEAT/U-box domain-containing protein; FUNCTIONS IN: binding, zinc ion binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Armadillo-type fold (InterPro:IPR016024); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36021 : 346.0) no description available & (gnl|cdd|34816 : 186.0) no description available & (reliability: 3150.0) & (original description: Putative v1g200094, Description = Predicted protein, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold86_40226-42819' ' no hits & (original description: Putative , Description = , PFAM = PF03108)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold88_624058-630075' '(at1g22850 : 275.0) SNARE associated Golgi protein family; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT1G03260.1); Has 4604 Blast hits to 4604 proteins in 1169 species: Archae - 23; Bacteria - 2889; Metazoa - 197; Fungi - 87; Plants - 283; Viruses - 0; Other Eukaryotes - 1125 (source: NCBI BLink). & (gnl|cdd|38350 : 134.0) no description available & (gnl|cdd|87885 : 116.0) no description available & (reliability: 550.0) & (original description: Putative BnaA07g10250D, Description = BnaA07g10250D protein, PFAM = PF09335)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold92_286848-289272' ' no hits & (original description: Putative , Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF00098)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold96_538903-596615' '(at5g51200 : 2239.0) Protein of unknown function (DUF3414); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3414 (InterPro:IPR021827); Has 203 Blast hits to 190 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 120; Fungi - 18; Plants - 55; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|37046 : 877.0) no description available & (reliability: 4478.0) & (original description: Putative NUP205, Description = Nuclear pore complex protein NUP205, PFAM = PF11894)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold96_879201-881539' '(atmg00860 : 90.5) hypothetical protein; DNA/RNA polymerases superfamily protein. & (gnl|cdd|73154 : 80.3) no description available & (reliability: 181.0) & (original description: Putative rt, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold101_265088-600217' ' (original description: Putative RT, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold102_938886-953740' '(at1g49890 : 233.0) Family of unknown function (DUF566) ; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 (InterPro:IPR007573); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) (TAIR:AT3G19570.2); Has 9198 Blast hits to 4153 proteins in 422 species: Archae - 34; Bacteria - 1349; Metazoa - 2630; Fungi - 1436; Plants - 341; Viruses - 197; Other Eukaryotes - 3211 (source: NCBI BLink). & (gnl|cdd|68069 : 214.0) no description available & (reliability: 466.0) & (original description: Putative SCO3, Description = Protein SNOWY COTYLEDON 3, PFAM = PF04484;PF04484)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold102_1086270-1088929' ' no hits & (original description: Putative Tgt1ORF2, Description = DNA/RNA polymerases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold103_650935-653336' ' no hits & (original description: Putative glysoja_007451, Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold103_957009-959712' ' no hits & (original description: Putative Tgt1ORF2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold105_3417-8459' '(at3g12940 : 597.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G19895.1); Has 67 Blast hits to 67 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1194.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold106_546530-624947' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Retrovirus-related Pol polyprotein LINE-1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold107_1872914-1884637' '(at2g39740 : 404.0) Nucleotidyltransferase family protein; BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT3G45750.1); Has 1708 Blast hits to 1608 proteins in 227 species: Archae - 0; Bacteria - 13; Metazoa - 799; Fungi - 328; Plants - 255; Viruses - 0; Other Eukaryotes - 313 (source: NCBI BLink). & (gnl|cdd|37488 : 157.0) no description available & (gnl|cdd|34857 : 102.0) no description available & (reliability: 808.0) & (original description: Putative Os01g0846450, Description = Os01g0846450 protein, PFAM = PF01909)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold108_1508308-1595175' ' no hits & (original description: Putative , Description = ZIM transcription factor, PFAM = PF09425;PF06200)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold110_621540-623943' ' (original description: Putative RT, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold117_202135-205357' '(at5g18130 : 129.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative UKP, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold118_376031-383672' '(at3g45890 : 622.0) Encodes RUS1 (root UVB sensitive 1), a protein that contains DUF647 (domain of unknown function 647), a domain highly conserved in eukaryotes. The primary root of rus1 is hypersensitive to very low-fluence-rate (VLF) UVB.; ROOT UVB SENSITIVE 1 (RUS1); INVOLVED IN: response to UV-B, developmental process; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: lateral root, root apical meristem, callus, elongation zone, embryonic root; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT1G13770.1); Has 458 Blast hits to 456 proteins in 133 species: Archae - 0; Bacteria - 2; Metazoa - 116; Fungi - 71; Plants - 198; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|68458 : 420.0) no description available & (gnl|cdd|39450 : 397.0) no description available & (reliability: 1244.0) & (original description: Putative Sb03g043876, Description = Putative uncharacterized protein Sb03g043876, PFAM = PF04884)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold118_1049410-1051928' ' no hits & (original description: Putative , Description = , PFAM = PF13966)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold119_293395-303876' '(at1g14780 : 469.0) MAC/Perforin domain-containing protein; CONTAINS InterPro DOMAIN/s: Membrane attack complex component/perforin (MACPF) domain (InterPro:IPR020864); BEST Arabidopsis thaliana protein match is: MAC/Perforin domain-containing protein (TAIR:AT4G24290.2); Has 221 Blast hits to 220 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 0; Plants - 202; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 938.0) & (original description: Putative At1g14780, Description = MACPF domain-containing protein At1g14780, PFAM = PF01823)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold124_870804-873271' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold128_434650-450176' '(at4g27060 : 733.0) Encodes a novel, plant-specific microtubule-associated protein that regulates the orientation of cortical microtubules and the direction of organ growth. The protein plays a role in control of microtubule dependent anisotropic cell elongation. spr2 mutant rosette leaves, cauline leaves, roots, petioles and petals curl in an anticlockwise direction.; TORTIFOLIA 1 (TOR1); CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G50890.1); Has 232 Blast hits to 225 proteins in 36 species: Archae - 2; Bacteria - 8; Metazoa - 6; Fungi - 6; Plants - 191; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 1466.0) & (original description: Putative hip2, Description = HCpro-interacting protein 2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold128_730234-733835' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold137_138618-141373' '(at2g26110 : 81.6) Protein of unknown function (DUF761); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G56980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative PGSC0003DMG400017835, Description = , PFAM = PF14364;PF05553)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold137_343784-349645' '(at4g29750 : 641.0) CRS1 / YhbY (CRM) domain-containing protein; FUNCTIONS IN: RNA binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: CRM family member 3A (TAIR:AT3G23070.1); Has 408 Blast hits to 338 proteins in 45 species: Archae - 2; Bacteria - 2; Metazoa - 32; Fungi - 6; Plants - 353; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|37201 : 383.0) no description available & (gnl|cdd|85815 : 91.4) no description available & (reliability: 1282.0) & (original description: Putative BnaC07g42090D, Description = BnaC07g42090D protein, PFAM = PF01985;PF01985;PF01985)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold138_531313-533882' '(at1g79770 : 143.0) Protein of unknown function (DUF1677); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1677, plant (InterPro:IPR012876); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1677) (TAIR:AT5G25840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71349 : 125.0) no description available & (reliability: 286.0) & (original description: Putative , Description = , PFAM = PF07911)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold138_549334-660598' '(at1g52140 : 124.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative , Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold146_228235-241614' ' (original description: Putative alr3038, Description = Alr3038 protein, PFAM = PF08241)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold148_743311-755529' ' no hits & (original description: Putative BnaA03g08450D, Description = BnaA03g08450D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold149_669378-677979' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold149_1008562-1010903' ' no hits & (original description: Putative TER1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold149_1059220-1061973' ' no hits & (original description: Putative PGSC0003DMG400024370, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold151_192677-195041' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold154_95822-120248' '(at2g19950 : 236.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC1 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (558-715 aa) portion of the protein.; golgin candidate 1 (GC1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus; CONTAINS InterPro DOMAIN/s: Golgin subfamily A member 5 (InterPro:IPR019177); BEST Arabidopsis thaliana protein match is: golgin candidate 2 (TAIR:AT1G18190.1). & (q5jly8|goga5_orysa : 222.0) Golgin-84 - Oryza sativa (Rice) & (reliability: 472.0) & (original description: Putative GC1, Description = Golgin-84, PFAM = PF09787)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold154_111881-117529' '(at2g19950 : 158.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC1 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (558-715 aa) portion of the protein.; golgin candidate 1 (GC1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus; CONTAINS InterPro DOMAIN/s: Golgin subfamily A member 5 (InterPro:IPR019177); BEST Arabidopsis thaliana protein match is: golgin candidate 2 (TAIR:AT1G18190.1). & (q5jly8|goga5_orysa : 135.0) Golgin-84 - Oryza sativa (Rice) & (reliability: 316.0) & (original description: Putative GC1, Description = Golgin-84, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold156_324966-331160' '(at1g63855 : 188.0) Putative methyltransferase family protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G27400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative At1g63855, Description = Putative methyltransferase family protein, PFAM = PF10294)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold159_471878-474249' ' no hits & (original description: Putative , Description = , PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold159_515230-543548' '(at4g04920 : 1732.0) Encodes a nuclear targeted protein that plays a role in the CBF pathway -downstream of CBF translation. Mutants have impaired cold responses, reduced levels of cold induced RNA transcripts, are sensitive to osmotic stress.; SENSITIVE TO FREEZING 6 (SFR6); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cold acclimation, circadian regulation of gene expression, response to osmotic stress, regulation of long-day photoperiodism, flowering; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages. & (reliability: 3464.0) & (original description: Putative MED16, Description = Mediator of RNA polymerase II transcription subunit 16, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold160_423543-436218' '(at5g19050 : 359.0) alpha/beta-Hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1749 (InterPro:IPR013744); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|40037 : 273.0) no description available & (gnl|cdd|71966 : 137.0) no description available & (reliability: 718.0) & (original description: Putative , Description = Alpha/beta-hydrolase superfamily protein, PFAM = PF08538)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold162_76097-83208' '(at5g66600 : 627.0) Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT2G23700.1). & (gnl|cdd|68359 : 206.0) no description available & (reliability: 1254.0) & (original description: Putative BnaC04g36150D, Description = BnaC04g36150D protein, PFAM = PF04784;PF14389)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold162_98793-366005' ' (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold162_351216-366365' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold170_773880-778281' ' no hits & (original description: Putative , Description = Seed biotin-containing SBP65, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold175_608972-906093' ' (original description: Putative , Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold177_376452-381674' '(gnl|cdd|72755 : 98.8) no description available & (at4g14385 : 98.2) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf6 (InterPro:IPR015418); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative EAF6, Description = Histone acetyltransferase subunit NuA4-domain containing protein, PFAM = PF09340)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold178_1001129-1009826' '(at3g19810 : 314.0) Protein of unknown function (DUF177); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF177 (InterPro:IPR003772); Has 677 Blast hits to 677 proteins in 297 species: Archae - 0; Bacteria - 566; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink). & (gnl|cdd|86051 : 94.7) no description available & (reliability: 628.0) & (original description: Putative , Description = PPR containing plant protein, PFAM = PF02620)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold182_433887-452045' '(at2g19270 : 117.0) CONTAINS InterPro DOMAIN/s: Mitotic checkpoint protein PRCC, C-terminal (InterPro:IPR018800); Has 930 Blast hits to 533 proteins in 146 species: Archae - 0; Bacteria - 18; Metazoa - 327; Fungi - 143; Plants - 61; Viruses - 0; Other Eukaryotes - 381 (source: NCBI BLink). & (gnl|cdd|39106 : 87.1) no description available & (reliability: 234.0) & (original description: Putative , Description = C-terminal, putative, PFAM = PF10253)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold184_469156-480028' '(at2g46900 : 501.0) CONTAINS InterPro DOMAIN/s: Basic helix-loop-helix, Nulp1-type (InterPro:IPR006994); Has 2929 Blast hits to 2464 proteins in 333 species: Archae - 2; Bacteria - 151; Metazoa - 913; Fungi - 372; Plants - 141; Viruses - 47; Other Eukaryotes - 1303 (source: NCBI BLink). & (gnl|cdd|37633 : 418.0) no description available & (gnl|cdd|68482 : 353.0) no description available & (reliability: 1002.0) & (original description: Putative TCM_004994, Description = Nulp1-type, putative, PFAM = PF04910)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold184_807151-810348' ' no hits & (original description: Putative , Description = Kinesin heavy chain, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold191_778241-784661' '(at4g17486 : 238.0) PPPDE putative thiol peptidase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT5G47310.1); Has 871 Blast hits to 871 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 234; Fungi - 89; Plants - 366; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (gnl|cdd|35545 : 209.0) no description available & (gnl|cdd|69428 : 168.0) no description available & (reliability: 476.0) & (original description: Putative At4g17486, Description = DeSI-like protein At4g17486, PFAM = PF05903)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold192_784101-791447' '(at5g19400 : 609.0) Encodes SMG7, a protein that possesses an evolutionarily conserved EST1 domain and exhibits strong homology to human SMG6 (EST1A) and SMG7 (EST1C) proteins. SMG7 plays an evolutionarily conserved role in nonsense-mediated RNA decay (NMD). Required for exit from meiosis. Hypomorphic smg7 alleles render mutant plants sterile by causing an unusual cell-cycle arrest in anaphase II that is characterized by delayed chromosome decondensation and aberrant rearrangement of the meiotic spindle. Disruption of SMG7 causes embryonic lethality.; SMG7; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: meiosis, spindle assembly involved in meiosis, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Telomerase activating protein Est1 (InterPro:IPR019458); BEST Arabidopsis thaliana protein match is: Telomerase activating protein Est1 (TAIR:AT1G28260.2). & (gnl|cdd|37373 : 202.0) no description available & (reliability: 1218.0) & (original description: Putative , Description = Smg-7, putative isoform 1, PFAM = PF10373;PF10374)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold193_701140-704167' ' no hits & (original description: Putative PGSC0003DMG400001172, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold194_143352-158308' ' no hits & (original description: Putative PX2, Description = Peroxidase, PFAM = PF00141)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold194_397978-406810' '(at1g67080 : 175.0) Encodes a protein involved in the photoprotection of PSII. An aba4-1 mutant completely lacks neoxanthin,a component of the chromophore of the peripheral antenna system in PSII. ABA4 is required for neoxanthin biosynthesis, an intermediary step in abscisic acid biosynthesis, but no catalytic activity has been detected for the ABA4 protein.; abscisic acid (ABA)-deficient 4 (ABA4); INVOLVED IN: abscisic acid biosynthetic process, regulation of superoxide anion generation, xanthophyll metabolic process, photoprotection; LOCATED IN: PSII associated light-harvesting complex II, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 723 Blast hits to 723 proteins in 64 species: Archae - 0; Bacteria - 78; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 587 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative ABA4, Description = Neoxanthin synthase, PFAM = PF14108)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold194_581250-587447' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold194_976928-979311' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold195_484956-487536' '(at5g50090 : 105.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative , Description = Serine/threonine-protein kinase TAO3, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold198_117223-120687' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold199_293975-297607' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold203_519374-603320' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Putative reverse transcriptase family member, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold203_620651-624017' ' no hits & (original description: Putative Os02g0497700, Description = Putative G3BP-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold204_497941-500827' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold204_942585-946324' ' (original description: Putative ARPI, Description = Trypsin proteinase inhibitor, PFAM = PF02428;PF02428;PF02428)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold204_968999-972517' '(at1g22630 : 96.7) unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 87 Blast hits to 86 proteins in 34 species: Archae - 0; Bacteria - 13; Metazoa - 27; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative umc1712, Description = At1g22630/F12K8_2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold204_980795-984864' ' (original description: Putative PI, Description = Trypsin proteinase inhibitor, PFAM = PF02428;PF02428;PF02428;PF02428;PF02428;PF02428)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold205_696652-704258' '(at3g16270 : 622.0) ENTH/VHS family protein; INVOLVED IN: intracellular protein transport; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), Epsin, N-terminal (InterPro:IPR001026), ENTH/VHS (InterPro:IPR008942); Has 168 Blast hits to 159 proteins in 72 species: Archae - 0; Bacteria - 9; Metazoa - 51; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|48666 : 153.0) no description available & (reliability: 1244.0) & (original description: Putative At3g16270, Description = VHS domain-containing protein At3g16270, PFAM = PF01417)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold206_921274-924147' ' no hits & (original description: Putative PGSC0003DMG400045123, Description = Zinc finger containing preotein, putative, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold207_529016-531712' ' no hits & (original description: Putative , Description = , PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold210_444717-625838' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold210_591145-595266' ' no hits & (original description: Putative PGSC0003DMG400002456, Description = Cysteine-rich extensin-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold217_937825-942543' '(gnl|cdd|69644 : 362.0) no description available & (at5g59790 : 289.0) CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF966 (InterPro:IPR010369), Uncharacterised conserved protein UCP031043 (InterPro:IPR021182); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF966) (TAIR:AT3G46110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 578.0) & (original description: Putative At3g46110, Description = At3g46110, PFAM = PF06136)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold223_577038-579393' ' no hits & (original description: Putative PGSC0003DMG400045123, Description = Zinc finger containing preotein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold226_757886-761062' '(at2g23790 : 140.0) Protein of unknown function (DUF607); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF607 (InterPro:IPR006769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF607) (TAIR:AT4G36820.1); Has 364 Blast hits to 364 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 147; Fungi - 45; Plants - 131; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|38177 : 108.0) no description available & (reliability: 280.0) & (original description: Putative PGSC0003DMG400001181, Description = PPR containing plant-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold232_529112-536123' '(at5g08540 : 335.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 670.0) & (original description: Putative PHYPADRAFT_45363, Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold238_265846-301063' '(at4g13750 : 2083.0) Encodes NO VEIN (NOV), a plant-specific nuclear factor required for leaf vascular development, cellular patterning and stem cell maintenance in the root meristem, as well as for cotyledon outgrowth and separation. nov mutations affect many aspects of auxin-dependent development without directly affecting auxin perception.; NO VEIN (NOV); FUNCTIONS IN: ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: no vein-like (TAIR:AT1G08300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 4166.0) & (original description: Putative Os03g0803700, Description = Os03g0803700 protein, PFAM = PF13020)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold238_503520-514458' '(at2g32760 : 274.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38107 : 104.0) no description available & (reliability: 548.0) & (original description: Putative At2g32755, Description = At2g32760, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold246_636834-652823' ' no hits & (original description: Putative PGSC0003DMG400003794, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold247_79183-82432' '(at5g13250 : 112.0) RING finger protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: RING finger protein (TAIR:AT1G28080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative Os12g0479100, Description = Os12g0479100 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold248_220907-223227' ' no hits & (original description: Putative HM01045, Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold248_777201-779936' ' no hits & (original description: Putative F14G11.3, Description = Putative ovule protein, PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold257_6627-36247' '(at3g19780 : 374.0) LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF179 (InterPro:IPR003774), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF179) (TAIR:AT1G33780.1). & (reliability: 748.0) & (original description: Putative TCM_007752, Description = Thioredoxin fold, putative isoform 1, PFAM = PF02622)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold257_390129-392716' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold272_896416-899287' ' no hits & (original description: Putative def7, Description = Defensin, PFAM = PF00304)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold274_648918-651947' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold274_826698-862435' '(at1g79190 : 1257.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 200 Blast hits to 184 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 76; Fungi - 76; Plants - 39; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|39724 : 85.0) no description available & (reliability: 2514.0) & (original description: Putative , Description = Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold277_827300-830049' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold277_827321-830067' ' no hits & (original description: Putative SDM1_53t00017, Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold280_149592-164723' '(at1g72170 : 101.0) Domain of unknown function (DUF543); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF543 (InterPro:IPR007512); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF543) (TAIR:AT1G22520.1); Has 92 Blast hits to 92 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 34; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative At1g72165/T9N14_2, Description = Putative uncharacterized protein At1g72165/T9N14_2, PFAM = PF04418)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold282_480685-502368' '(at5g36000 : 384.0) BEST Arabidopsis thaliana protein match is: reduced male fertility (TAIR:AT3G61730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 768.0) & (original description: Putative RMF, Description = Probable F-box protein At3g61730, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold294_419108-432725' '(at1g22060 : 763.0) LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G22000.1); Has 84739 Blast hits to 38714 proteins in 2257 species: Archae - 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706; Plants - 4675; Viruses - 308; Other Eukaryotes - 18553 (source: NCBI BLink). & (gnl|cdd|35383 : 111.0) no description available & (gnl|cdd|31389 : 80.8) no description available & (reliability: 1526.0) & (original description: Putative BnaC05g17370D, Description = Putative ovule protein, PFAM = PF10358)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold295_356412-363012' '(at4g17760 : 389.0) damaged DNA binding;exodeoxyribonuclease IIIs; FUNCTIONS IN: damaged DNA binding, exodeoxyribonuclease III activity; INVOLVED IN: DNA repair; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Repair protein Rad1/Rec1 (InterPro:IPR003021); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|48351 : 86.1) no description available & (reliability: 778.0) & (original description: Putative Sb10g002080, Description = Putative uncharacterized protein Sb10g002080, PFAM = PF02144;PF02144)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold296_533837-550206' '(at5g22040 : 147.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown. & (reliability: 294.0) & (original description: Putative At5g22040, Description = At5g22040, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold297_663210-666501' ' no hits & (original description: Putative GagPol3, Description = Putative retroelement pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold299_795612-804897' '(at5g67610 : 383.0) Uncharacterized conserved protein (DUF2215); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2215 (InterPro:IPR019358); BEST Arabidopsis thaliana protein match is: Uncharacterized conserved protein (DUF2215) (TAIR:AT3G49840.1); Has 145 Blast hits to 145 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 61; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 766.0) & (original description: Putative BnaA06g24920D, Description = BnaA06g24920D protein, PFAM = PF10225)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold302_76448-532818' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold304_436840-443036' ' no hits & (original description: Putative PGSC0003DMG400028755, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold305_462632-470300' '(at2g01640 : 86.3) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 172.6) & (original description: Putative , Description = Putative reverse transcriptase, PFAM = PF15341)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold307_348461-352697' ' no hits & (original description: Putative , Description = , PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold308_25692-30759' '(at3g45750 : 293.0) Nucleotidyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT3G45760.1). & (gnl|cdd|37488 : 151.0) no description available & (gnl|cdd|34857 : 82.0) no description available & (reliability: 586.0) & (original description: Putative At3g45750, Description = Nucleotidyltransferase family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold308_26945-31347' '(at3g45750 : 182.0) Nucleotidyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT3G45760.1). & (reliability: 364.0) & (original description: Putative At3g45750, Description = Nucleotidyltransferase family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold310_207244-209822' ' no hits & (original description: Putative TER1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold310_207289-209941' ' no hits & (original description: Putative , Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold310_667183-686293' '(at4g24290 : 653.0) MAC/Perforin domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Membrane attack complex component/perforin (MACPF) domain (InterPro:IPR020864), Membrane attack complex component/perforin (MACPF) domain, metazoa (InterPro:IPR020865); BEST Arabidopsis thaliana protein match is: MAC/Perforin domain-containing protein (TAIR:AT1G28380.1); Has 264 Blast hits to 263 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 51; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 1306.0) & (original description: Putative At4g24290, Description = MACPF domain-containing protein At4g24290, PFAM = PF01823)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold311_777323-786309' '(at5g10320 : 330.0) unknown protein; Has 51 Blast hits to 50 proteins in 17 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 660.0) & (original description: Putative , Description = Polyadenylate-binding protein 2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold312_684656-692834' '(at5g53440 : 163.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative PGSC0003DMG400012278, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold312_745313-747702' '(atmg00520 : 225.0) hypothetical protein; MATR; FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity; INVOLVED IN: RNA-dependent DNA replication, RNA splicing; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Intron maturase, type II (InterPro:IPR000442), RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477); BEST Arabidopsis thaliana protein match is: Intron maturase, type II family protein (TAIR:AT1G74350.1). & (gnl|cdd|39965 : 144.0) no description available & (reliability: 450.0) & (original description: Putative matR, Description = Maturase, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold313_496946-510987' '(at2g16485 : 776.0) nucleic acid binding;zinc ion binding;DNA binding; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: histone modification, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Plus-3 domain, subgroup (InterPro:IPR018144), Zinc finger, PHD-type (InterPro:IPR001965), GYF (InterPro:IPR003169), SWIB/MDM2 domain (InterPro:IPR003121), Plus-3 (InterPro:IPR004343), SWIB domain (InterPro:IPR019835), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding (TAIR:AT3G51120.1); Has 38357 Blast hits to 25980 proteins in 1833 species: Archae - 670; Bacteria - 4778; Metazoa - 14464; Fungi - 4561; Plants - 3104; Viruses - 298; Other Eukaryotes - 10482 (source: NCBI BLink). & (gnl|cdd|37157 : 147.0) no description available & (gnl|cdd|47987 : 131.0) no description available & (reliability: 1552.0) & (original description: Putative glysoja_014611, Description = Zinc finger CCCH domain-containing protein 44, PFAM = PF02213;PF02201;PF03126)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold314_82585-86224' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold314_282138-298844' '(at1g77620 : 438.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding; INVOLVED IN: DNA repair, cell cycle; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Checkpoint protein Rad24 (InterPro:IPR004582), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: replication factor C1 (TAIR:AT5G22010.1); Has 1511 Blast hits to 1466 proteins in 328 species: Archae - 281; Bacteria - 0; Metazoa - 363; Fungi - 421; Plants - 133; Viruses - 9; Other Eukaryotes - 304 (source: NCBI BLink). & (gnl|cdd|37179 : 105.0) no description available & (reliability: 876.0) & (original description: Putative BnaCnng11360D, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold315_245644-264516' '(at2g28310 : 590.0) Protein of unknown function (DUF707); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G08040.2); Has 326 Blast hits to 325 proteins in 27 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 0; Plants - 305; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|68772 : 525.0) no description available & (reliability: 1180.0) & (original description: Putative gpm621, Description = Lysine ketoglutarate reductase trans-splicing related 1, PFAM = PF05212)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold316_316949-322970' ' no hits & (original description: Putative PGSC0003DMG400041916, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold320_556274-625569' '(at1g72490 : 174.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17400.1); Has 75 Blast hits to 75 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 4; Plants - 58; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative BnaC05g13550D, Description = BnaC05g13550D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold321_779836-786840' ' no hits & (original description: Putative PGSC0003DMG400010828, Description = , PFAM = PF10950)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold322_45999-48331' ' no hits & (original description: Putative , Description = , PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold322_662258-664798' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold323_628619-636589' '(at3g51580 : 127.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages. & (reliability: 254.0) & (original description: Putative BnaA09g21410D, Description = BnaA09g21410D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold325_573124-576772' ' no hits & (original description: Putative FGENESH1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold330_229051-234628' ' no hits & (original description: Putative PGSC0003DMG400030628, Description = Cytochrome c oxidase, subunit VIa, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold342_252702-256679' '(at5g21940 : 83.2) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative PGSC0003DMG400005597, Description = Damaged dna-binding 2, putative isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold342_272570-276285' ' no hits & (original description: Putative , Description = , PFAM = PF09331)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold344_619068-630825' '(at3g58050 : 827.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41960.1); Has 13384 Blast hits to 8116 proteins in 546 species: Archae - 41; Bacteria - 766; Metazoa - 5596; Fungi - 1431; Plants - 589; Viruses - 46; Other Eukaryotes - 4915 (source: NCBI BLink). & (reliability: 1654.0) & (original description: Putative At2g41960, Description = Putative uncharacterized protein At2g41960, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold346_114838-492752' '(at5g06590 : 152.0) unknown protein; Has 38 Blast hits to 38 proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold352_427467-430312' ' no hits & (original description: Putative PGSC0003DMG400006509, Description = Putative ovule protein, PFAM = PF13966)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold355_342401-362812' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Putative RNA-directed DNA polymerase (Reverse transcriptase), PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold359_435787-438776' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold359_494767-497322' ' no hits & (original description: Putative PGSC0003DMG400001558, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold361_331490-335565' ' (original description: Putative Sb06g033573, Description = Putative uncharacterized protein Sb06g033573, PFAM = PF05699)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold363_580282-684830' '(at5g61450 : 396.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32257 : 86.5) no description available & (reliability: 792.0) & (original description: Putative At5g61450, Description = Putative 2-phosphoglycerate kinase-like, PFAM = PF13238)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold364_785440-787976' ' no hits & (original description: Putative PGSC0003DMG400024810, Description = Carboxypeptidase, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold368_104710-107125' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold372_513655-528171' '(at4g35560 : 780.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT5G05570.2). & (reliability: 1560.0) & (original description: Putative Os04g0564700, Description = Os04g0564700 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold382_185521-187850' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold385_638522-640749' ' (original description: Putative Tdv1, Description = Transposon protein, putative, CACTA, En/Spm sub-class, PFAM = PF13963;PF02992)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold389_287335-364806' '(at1g19360 : 592.0) Nucleotide-diphospho-sugar transferase family protein; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT1G75110.1); Has 297 Blast hits to 291 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 280; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|36593 : 271.0) no description available & (reliability: 1184.0) & (original description: Putative RRA3, Description = Arabinosyltransferase RRA3, PFAM = PF03407;PF07228)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold389_405869-408291' ' no hits & (original description: Putative glysoja_007451, Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = PF08284)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold390_635235-639689' ' no hits & (original description: Putative PGSC0003DMG400030843, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold395_127481-131349' ' no hits & (original description: Putative BnaA06g39330D, Description = Copper-binding family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold395_508610-530131' '(at1g27510 : 579.0) FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: response to singlet oxygen; LOCATED IN: thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3506 (InterPro:IPR021894), UvrB/UvrC protein (InterPro:IPR001943); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3506) (TAIR:AT4G33630.2); Has 287 Blast hits to 280 proteins in 95 species: Archae - 0; Bacteria - 15; Metazoa - 66; Fungi - 43; Plants - 121; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 1158.0) & (original description: Putative EX2, Description = Protein EXECUTER 2, chloroplastic, PFAM = PF12014)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold396_89479-440188' '(at4g32960 : 175.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32970.1); Has 106 Blast hits to 106 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative At4g32960, Description = At4g32960, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold396_481017-483785' ' no hits & (original description: Putative , Description = Iron import ATP-binding/permease IrtA, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold398_120827-123227' ' no hits & (original description: Putative HM01045, Description = Retrovirus-related Pol polyprotein LINE-1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold398_120848-123294' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold398_615764-621684' ' no hits & (original description: Putative Ccrd_012773, Description = Aminotransferase-like, plant mobile domain-containing protein, PFAM = PF10536;PF03145)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold398_617920-622811' ' no hits & (original description: Putative PGSC0003DMG400016690, Description = Aminotransferase-like, plant mobile domain-containing protein, PFAM = PF10536)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold403_576898-581881' '(gnl|cdd|70175 : 422.0) no description available & (at5g17620 : 375.0) CONTAINS InterPro DOMAIN/s: Plant nuclear matrix 1 (InterPro:IPR010604); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 750.0) & (original description: Putative BnaA10g17120D, Description = BnaA10g17120D protein, PFAM = PF06694)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold407_608412-610924' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold407_762775-765303' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold410_148217-153785' '(at1g80310 : 488.0) sulfate transmembrane transporters; FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547); BEST Arabidopsis thaliana protein match is: molybdate transporter 1 (TAIR:AT2G25680.1); Has 846 Blast hits to 836 proteins in 367 species: Archae - 24; Bacteria - 581; Metazoa - 20; Fungi - 62; Plants - 71; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 976.0) & (original description: Putative MOT2, Description = Molybdate transporter 2, PFAM = PF16983;PF16983)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold410_449531-457795' '(gnl|cdd|68437 : 498.0) no description available & (at5g11420 : 497.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF642 (TAIR:AT5G25460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 994.0) & (original description: Putative BnaC09g45170D, Description = BnaC09g45170D protein, PFAM = PF04862;PF04862)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold410_599608-607745' '(at1g79915 : 291.0) Putative methyltransferase family protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); Has 424 Blast hits to 423 proteins in 116 species: Archae - 0; Bacteria - 1; Metazoa - 170; Fungi - 70; Plants - 129; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 582.0) & (original description: Putative At1g79915, Description = Putative methyltransferase family protein, PFAM = PF10294)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold410_607508-613892' '(at1g52320 : 269.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT5G25590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68357 : 194.0) no description available & (reliability: 538.0) & (original description: Putative bZIP54, Description = Os05g0394200 protein, PFAM = PF04783;PF04782)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold413_566230-570534' ' no hits & (original description: Putative , Description = , PFAM = PF00035)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold416_390795-393391' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold416_768048-771242' ' no hits & (original description: Putative str246N, Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold421_56005-59671' '(at4g34215 : 173.0) Encodes a member of the SGNH-hydrolase superfamily of enzymes. The enzymes of the SGNH-hydrolase superfamily facilitate the hydrolysis of ester, thioester and amide bonds in a range of substrates including complex polysaccharides, lysophospholipids, acyl-CoA esters and other compounds.; Domain of unknown function (DUF303) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF303, acetylesterase putative (InterPro:IPR005181); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF303) (TAIR:AT3G53010.1); Has 345 Blast hits to 345 proteins in 104 species: Archae - 2; Bacteria - 231; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative TCM_033755, Description = Domain of Uncharacterized protein function (DUF303), putative, PFAM = PF03629)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold424_264136-267512' ' no hits & (original description: Putative ECT2, Description = CIPK1 interacting protein ECT2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold425_526791-533590' ' (original description: Putative RT, Description = Reverse transcriptase, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold427_8570-10872' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold431_284398-378686' '(at5g24740 : 2400.0) EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (gnl|cdd|37020 : 158.0) no description available & (gnl|cdd|34648 : 156.0) no description available & (reliability: 4800.0) & (original description: Putative , Description = , PFAM = PF06650;PF16909;PF16908;PF16910;PF12624)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold432_57594-60612' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold432_65197-305039' ' (original description: Putative LgRT16, Description = Reverse transcriptases, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold434_591011-593478' ' no hits & (original description: Putative InvI1, Description = Putative invertase inhibitor, PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold437_473454-477039' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold438_679198-686214' '(at2g30700 : 535.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G61900.1); Has 68 Blast hits to 67 proteins in 13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1070.0) & (original description: Putative Sb01g030650, Description = Putative uncharacterized protein Sb01g030650, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold439_497483-501814' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold440_540888-543743' ' no hits & (original description: Putative PGSC0003DMG400017154, Description = Family of Uncharacterized protein function, putative, PFAM = PF04819)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold441_54000-56732' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold444_654854-657708' '(at5g10750 : 375.0) Protein of unknown function (DUF1336); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT5G24990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70520 : 220.0) no description available & (reliability: 750.0) & (original description: Putative EDR2, Description = Pleckstrin homology domain-containing family protein, PFAM = PF07059)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold446_136364-140134' '(at3g29010 : 239.0) Biotin/lipoate A/B protein ligase family; FUNCTIONS IN: catalytic activity; INVOLVED IN: protein modification process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Biotin/lipoate A/B protein ligase (InterPro:IPR004143); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38369 : 120.0) no description available & (gnl|cdd|30444 : 96.6) no description available & (reliability: 478.0) & (original description: Putative lplA, Description = Putative lipoate-protein ligase A, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold451_229141-231666' ' no hits & (original description: Putative PGSC0003DMG400013717, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold453_338384-340974' '(at3g57950 : 104.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42180.1); Has 81 Blast hits to 81 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative BnaC09g48790D, Description = BnaC09g48790D protein, PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold457_671968-674345' '(at4g04630 : 117.0) Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT4G21970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68105 : 116.0) no description available & (reliability: 234.0) & (original description: Putative At2g34340, Description = At2g34340, PFAM = PF04520)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold463_589954-594308' '(at5g42765 : 183.0) INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative At5g42765, Description = Chloroplast thylakoid membrane, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold464_61833-89194' '(at2g01690 : 1014.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), Protein of unknown function DUF3434 (InterPro:IPR021841), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35433 : 758.0) no description available & (reliability: 2028.0) & (original description: Putative VAC14, Description = Protein VAC14, PFAM = PF12755;PF11916)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold465_549829-566256' '(at5g66810 : 674.0) CONTAINS InterPro DOMAIN/s: CTLH, C-terminal LisH motif (InterPro:IPR006595); BEST Arabidopsis thaliana protein match is: LisH and RanBPM domains containing protein (TAIR:AT1G61150.1); Has 333 Blast hits to 242 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 47; Plants - 152; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|37870 : 109.0) no description available & (reliability: 1348.0) & (original description: Putative , Description = , PFAM = PF10607)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold466_622000-624693' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold467_164074-167602' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = PF13976)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold470_267005-269516' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold484_316519-346175' '(at1g34320 : 773.0) Protein of unknown function (DUF668); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700), Protein of unknown function DUF3475 (InterPro:IPR021864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT5G08660.1); Has 339 Blast hits to 273 proteins in 21 species: Archae - 0; Bacteria - 1; Metazoa - 3; Fungi - 0; Plants - 335; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68572 : 110.0) no description available & (reliability: 1546.0) & (original description: Putative At1g34320, Description = At1g34320, PFAM = PF05003;PF11961)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold492_266251-281165' '(gnl|cdd|70386 : 130.0) no description available & (at1g76750 : 120.0) Protein of unknown function (DUF1278); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1278 (InterPro:IPR010701); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1278) (TAIR:AT4G39340.1); Has 86 Blast hits to 86 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative EC1, Description = Egg cell 1, PFAM = PF05617)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold500_53867-56031' ' no hits & (original description: Putative rpl32, Description = 50S ribosomal protein L32, chloroplastic, PFAM = PF01783)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold500_398134-400433' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold501_362824-365598' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold503_585750-589250' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold503_609871-624067' '(at1g75180 : 305.0) Erythronate-4-phosphate dehydrogenase family protein; BEST Arabidopsis thaliana protein match is: Erythronate-4-phosphate dehydrogenase family protein (TAIR:AT1G19400.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 610.0) & (original description: Putative At1g01500, Description = Uncharacterized protein At1g01500, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold503_669692-672699' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold504_27476-32731' '(at4g01880 : 540.0) methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: tRNA processing; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type, TRM13 (InterPro:IPR021721), Methyltransferase TRM13 (InterPro:IPR007871); Has 320 Blast hits to 305 proteins in 140 species: Archae - 2; Bacteria - 9; Metazoa - 124; Fungi - 54; Plants - 43; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|38022 : 299.0) no description available & (gnl|cdd|68766 : 240.0) no description available & (reliability: 1080.0) & (original description: Putative BnaA03g26500D, Description = BnaA03g26500D protein, PFAM = PF05253;PF05206;PF11722)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold505_212274-220971' '(at2g02570 : 318.0) nucleic acid binding;RNA binding; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tudor subgroup (InterPro:IPR018351), Tudor domain (InterPro:IPR002999), Survival motor neuron (InterPro:IPR010304); Has 339 Blast hits to 339 proteins in 158 species: Archae - 0; Bacteria - 5; Metazoa - 136; Fungi - 89; Plants - 55; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|38236 : 165.0) no description available & (reliability: 636.0) & (original description: Putative At2g02570, Description = Putative survival of motor neuron-related-splicing factor 30-like, PFAM = PF06003)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold508_184805-190359' '(gnl|cdd|66735 : 162.0) no description available & (at2g38255 : 152.0) Protein of Unknown Function (DUF239); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT2G27320.1); Has 682 Blast hits to 655 proteins in 27 species: Archae - 0; Bacteria - 13; Metazoa - 0; Fungi - 10; Plants - 659; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF03080;PF14365)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold510_107281-109613' ' no hits & (original description: Putative , Description = RNase H family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold511_587694-603585' '(at4g31880 : 219.0) LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1). & (gnl|cdd|36738 : 137.0) no description available & (reliability: 438.0) & (original description: Putative At1g15940, Description = Aspartyl beta-hydroxylase N-terminal region domain-containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold518_327415-343927' ' (original description: Putative PGSC0003DMG400012634, Description = , PFAM = PF03023;PF03023)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold518_633455-655335' ' no hits & (original description: Putative At5g40450, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold523_672061-679783' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold531_387845-418200' '(at3g03560 : 400.0) unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23490.1); Has 157 Blast hits to 146 proteins in 38 species: Archae - 3; Bacteria - 14; Metazoa - 8; Fungi - 0; Plants - 120; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 800.0) & (original description: Putative TCM_025689, Description = Uncharacterized protein isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold539_453812-486877' '(at2g48060 : 2950.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, sperm cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341 proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa - 318; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|37104 : 403.0) no description available & (reliability: 5900.0) & (original description: Putative At2g48040/At2g48050/At2g48060, Description = Piezo-type mechanosensitive ion channel homolog, PFAM = PF12166)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold544_220765-224387' '(at5g21940 : 91.7) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold545_87446-95192' '(at4g31400 : 260.0) Encodes CTF7, a homolog of the yeast CTF protein required for the formation of sister chromatid cohesion. Arabidopsis CTF7 is similar to Saccharomyces cerevisiae CTF7 in that it lacks an N-terminal extension, exhibits acetyltransferase activity, and can complement a yeast ctf7 temperature-sensitive mutation. Arabidopsis CTF7 is critical for female gametophyte and embryo development, but not for the establishment of mitotic cohesion during microgametogenesis or during endosperm development.; CTF7; FUNCTIONS IN: damaged DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: sister chromatid cohesion, embryo sac development, embryo development; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: DNA-repair protein, UmuC-like (InterPro:IPR001126); Has 328 Blast hits to 327 proteins in 141 species: Archae - 0; Bacteria - 2; Metazoa - 149; Fungi - 104; Plants - 43; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|38224 : 163.0) no description available & (reliability: 520.0) & (original description: Putative CTF7, Description = N-acetyltransferase ESCO2-like protein, PFAM = PF13880;PF13878)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold549_402145-408755' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold563_72-43363' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold566_313585-323184' '(at4g33780 : 136.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: short hypocotyl in white light1 (TAIR:AT1G69935.1); Has 40 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative At4g33780, Description = Putative uncharacterized protein At4g33780, PFAM = PF02416)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold574_50537-55451' '(at3g29280 : 225.0) unknown protein; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 450.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold576_275295-368243' ' no hits & (original description: Putative PGSC0003DMG400045123, Description = Zinc finger containing preotein, putative, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold577_281833-284492' ' no hits & (original description: Putative Sb01g029366, Description = Putative uncharacterized protein Sb01g029366, PFAM = PF00098)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold580_125987-129858' ' no hits & (original description: Putative sar, Description = Putative SAR8.2a-like protein, PFAM = PF03058)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold580_302809-434247' ' no hits & (original description: Putative GRP1, Description = Glycine-rich protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold589_139640-144045' ' (original description: Putative POLR2A, Description = Cell wall hydroxyproline-rich glycoprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold593_120755-597133' ' (original description: Putative Tgt1ORF2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold594_8634-11146' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold599_126471-130126' '(at3g60810 : 256.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1499 (InterPro:IPR010865); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34126 : 97.4) no description available & (reliability: 512.0) & (original description: Putative , Description = , PFAM = PF07386)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold605_504633-515096' '(at1g56423 : 232.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 464.0) & (original description: Putative Sb01g037490, Description = Putative uncharacterized protein Sb01g037490, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold607_473436-536589' ' no hits & (original description: Putative , Description = , PFAM = PF04535)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold612_648358-661839' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold613_22269-46119' '(at4g22970 : 1312.0) Encodes a separase (ESP), homologous to human and mouse separase protein. Separase is a capase family protease required for the release of sister chromatid cohesion during meiosis and mitosis. Arabidopsis separase contains a predicted 2Fe2S-ferredoxin domain that is not present in the proteins of other organisms. Also contains a putative EF-hand calcium binding domain. Mutant seeds exhibited embryo arrest at the globular stage. The endosperm also exhibited a weak titan-like phenotype. Transgenic plants expressing AESP RNA interference (RNAi) from the meiosis-specific DMC1 promoter exhibited alterations in chromosome segregation during meiosis I and II that resulted in polyads containing from one to eight microspores. Plays an essential role in embryo development. Required for the removal of cohesin from meiotic chromosomes and establishment of meiotic nuclear domains. This gene was also identified through the rsw4 mutant. Lines carrying recessive, temperature-sensitive mutations exhibit reduced anisotropic growth at 30 degrees Celsius. Microtubules and cellulose microfibrils are not depleted or disoriented in the mutants at the restrictive temperature.; homolog of separase (ESP); FUNCTIONS IN: peptidase activity; INVOLVED IN: meiotic chromosome separation, chromosome separation, embryo development ending in seed dormancy, positive regulation of sister chromatid cohesion, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C50, separase (InterPro:IPR005314); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28550.1). & (gnl|cdd|86370 : 255.0) no description available & (gnl|cdd|37060 : 128.0) no description available & (reliability: 2624.0) & (original description: Putative Sb04g034460, Description = Putative ovule protein, PFAM = PF03568)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold613_147088-158813' '(at5g24750 : 430.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G07020.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 860.0) & (original description: Putative BnaC02g41080D, Description = BnaC02g41080D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold621_653403-657110' '(at4g01935 : 246.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 37 Blast hits to 37 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative Os01g0252600, Description = Os01g0252600 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold623_645791-648270' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Retrovirus-related Pol polyprotein LINE-1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold625_138221-375542' ' no hits & (original description: Putative glysoja_030340, Description = Integrase core domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold634_40611-44436' ' no hits & (original description: Putative PGSC0003DMG400026333, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold637_144701-147196' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold637_532190-546521' ' no hits & (original description: Putative pdb1, Description = Methyl-CpG-binding domain protein, PFAM = PF01429)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold639_134906-138866' '(at3g26990 : 132.0) ENTH/VHS family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT5G65180.1); Has 1003 Blast hits to 995 proteins in 197 species: Archae - 0; Bacteria - 21; Metazoa - 515; Fungi - 219; Plants - 159; Viruses - 1; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative At3g26990, Description = At3g26990, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold646_297477-306948' '(at5g17910 : 200.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29620.1). & (reliability: 400.0) & (original description: Putative At2g29620, Description = BnaA05g12420D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold647_70019-72445' ' no hits & (original description: Putative PGSC0003DMG400012437, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold658_67417-77498' '(at5g49820 : 644.0) EMBRYO DEFECTIVE 1879 (EMB1879); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT2G31190.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68458 : 409.0) no description available & (gnl|cdd|39450 : 375.0) no description available & (reliability: 1288.0) & (original description: Putative , Description = , PFAM = PF04884)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold658_619229-621612' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold665_281936-284868' ' no hits & (original description: Putative PGSC0003DMG400009028, Description = , PFAM = PF11250)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold676_527374-531293' '(gnl|cdd|86287 : 398.0) no description available & (at1g10280 : 388.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT3G21310.1); Has 584 Blast hits to 584 proteins in 19 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 556; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 776.0) & (original description: Putative At1g10280, Description = At1g10280, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold679_592463-595453' ' no hits & (original description: Putative , Description = , PFAM = PF13966)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold682_429318-432073' ' no hits & (original description: Putative VIP5, Description = Plus-3 domain-containing family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold683_259462-261848' ' no hits & (original description: Putative HM01045, Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold684_322978-329407' '(at5g19630 : 242.0) alpha/beta-Hydrolases superfamily protein; Has 1062 Blast hits to 1062 proteins in 417 species: Archae - 16; Bacteria - 763; Metazoa - 1; Fungi - 28; Plants - 66; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). & (reliability: 484.0) & (original description: Putative SHCRBa_257_A20_R_110, Description = Putative Alpha/beta hydrolase family, PFAM = PF00561)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold687_405069-416663' '(gnl|cdd|68624 : 113.0) no description available & (at5g01130 : 102.0) Protein of unknown function (DUF674); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF674 (InterPro:IPR007750); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF674) (TAIR:AT5G01150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative TCM_042950, Description = Translation initiation factor IF-2, putative, PFAM = PF05056)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold699_121134-124139' ' no hits & (original description: Putative dl4485c, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold700_82877-85366' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold700_621109-630619' '(at1g50450 : 550.0) Saccharopine dehydrogenase ; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Saccharopine dehydrogenase / Homospermidine synthase (InterPro:IPR005097), NAD(P)-binding domain (InterPro:IPR016040); Has 1549 Blast hits to 1547 proteins in 500 species: Archae - 22; Bacteria - 980; Metazoa - 33; Fungi - 88; Plants - 49; Viruses - 0; Other Eukaryotes - 377 (source: NCBI BLink). & (gnl|cdd|86318 : 163.0) no description available & (reliability: 1100.0) & (original description: Putative CPLD49, Description = Saccharopine dehydrogenase-like protein, PFAM = PF03435)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold703_104485-125129' '(at3g50380 : 1188.0) INVOLVED IN: protein localization; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein (InterPro:IPR009543); Has 365 Blast hits to 355 proteins in 118 species: Archae - 0; Bacteria - 0; Metazoa - 156; Fungi - 111; Plants - 61; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|37020 : 140.0) no description available & (gnl|cdd|87123 : 95.4) no description available & (reliability: 2376.0) & (original description: Putative At3g50380, Description = Os12g0594200 protein, PFAM = PF06650)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold703_140368-151267' '(at3g50380 : 315.0) INVOLVED IN: protein localization; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein (InterPro:IPR009543); Has 365 Blast hits to 355 proteins in 118 species: Archae - 0; Bacteria - 0; Metazoa - 156; Fungi - 111; Plants - 61; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (reliability: 630.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold709_102525-117082' '(at4g12840 : 463.0) Protein of unknown function (DUF707); EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT4G18530.1); Has 319 Blast hits to 319 proteins in 27 species: Archae - 0; Bacteria - 13; Metazoa - 0; Fungi - 0; Plants - 303; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|68772 : 344.0) no description available & (reliability: 926.0) & (original description: Putative At4g12840, Description = At4g12840, PFAM = PF05212)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold709_147772-150191' ' (original description: Putative pol, Description = Reverse transcriptase, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold709_246946-253764' '(at5g48385 : 556.0) FRIGIDA-like protein; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT4G14900.1); Has 1269 Blast hits to 1187 proteins in 101 species: Archae - 0; Bacteria - 22; Metazoa - 72; Fungi - 9; Plants - 1133; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|71337 : 335.0) no description available & (reliability: 1112.0) & (original description: Putative FRL3, Description = FRIGIDA-like protein 3, PFAM = PF07899)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold712_583415-603866' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold717_956539-969882' '(at2g16485 : 806.0) nucleic acid binding;zinc ion binding;DNA binding; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: histone modification, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Plus-3 domain, subgroup (InterPro:IPR018144), Zinc finger, PHD-type (InterPro:IPR001965), GYF (InterPro:IPR003169), SWIB/MDM2 domain (InterPro:IPR003121), Plus-3 (InterPro:IPR004343), SWIB domain (InterPro:IPR019835), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding (TAIR:AT3G51120.1); Has 38357 Blast hits to 25980 proteins in 1833 species: Archae - 670; Bacteria - 4778; Metazoa - 14464; Fungi - 4561; Plants - 3104; Viruses - 298; Other Eukaryotes - 10482 (source: NCBI BLink). & (gnl|cdd|37157 : 143.0) no description available & (gnl|cdd|47987 : 125.0) no description available & (reliability: 1612.0) & (original description: Putative BnaA09g08750D, Description = BnaA09g08750D protein, PFAM = PF02213;PF02201;PF03126)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold721_614248-616888' ' no hits & (original description: Putative , Description = Retrotransposon gag protein, PFAM = PF08284)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold728_109213-127661' '(at4g16580 : 518.0) Protein phosphatase 2C family protein; FUNCTIONS IN: phosphoprotein phosphatase activity, catalytic activity; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Sporulation stage II, protein E C-terminal (InterPro:IPR010822); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66720.1); Has 838 Blast hits to 828 proteins in 210 species: Archae - 0; Bacteria - 2; Metazoa - 184; Fungi - 235; Plants - 232; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (gnl|cdd|36593 : 319.0) no description available & (reliability: 1036.0) & (original description: Putative At4g16580, Description = Probable protein phosphatase 2C 55, PFAM = PF07228)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold729_441900-444202' ' no hits & (original description: Putative , Description = , PFAM = PF06839)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold731_306290-308694' ' no hits & (original description: Putative At2g06320, Description = Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold734_11019-266843' ' (original description: Putative csd, Description = Putative cysteine desulfurase, PFAM = PF00266)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold734_259326-267173' ' (original description: Putative atr, Description = Putative aminotransferase, class V family protein, PFAM = PF00266)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold740_561807-567783' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold753_385705-410015' '(at3g22520 : 170.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14840.1); Has 717 Blast hits to 703 proteins in 179 species: Archae - 14; Bacteria - 134; Metazoa - 141; Fungi - 74; Plants - 209; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative BnaA01g24650D, Description = BnaA01g24650D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold755_48217-51071' '(at1g31460 : 96.7) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23270.1); Has 1251 Blast hits to 756 proteins in 185 species: Archae - 0; Bacteria - 295; Metazoa - 374; Fungi - 176; Plants - 58; Viruses - 17; Other Eukaryotes - 331 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative PGSC0003DMG400041236, Description = At1g31460, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold761_255230-261926' '(at1g47330 : 518.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein with a domain of unknown function (DUF21) (TAIR:AT2G14520.1); Has 11150 Blast hits to 10836 proteins in 2494 species: Archae - 102; Bacteria - 8237; Metazoa - 428; Fungi - 268; Plants - 237; Viruses - 0; Other Eukaryotes - 1878 (source: NCBI BLink). & (gnl|cdd|37329 : 352.0) no description available & (gnl|cdd|31445 : 168.0) no description available & (reliability: 1036.0) & (original description: Putative CBSDUF7, Description = DUF21 domain-containing protein At1g47330, PFAM = PF00571;PF01595)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold762_91597-105713' ' no hits & (original description: Putative PGSC0003DMG400014888, Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, putative, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold762_572870-577456' '(at5g54890 : 338.0) RNA-binding CRS1 / YhbY (CRM) domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, C globular stage, F mature embryo stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain-containing protein (TAIR:AT4G31010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 676.0) & (original description: Putative CAF1, Description = CRS2-associated factor 1, PFAM = PF01985;PF01985)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold773_351786-397377' '(at1g76480 : 189.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20890.1). & (reliability: 378.0) & (original description: Putative At1g20890, Description = At1g20890, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold781_564054-566416' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold782_169492-172456' ' no hits & (original description: Putative , Description = , PFAM = PF13963)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold783_536526-541070' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold801_96691-98996' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold812_430937-433351' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold813_514305-516670' ' no hits & (original description: Putative , Description = TIR-NBS-LRR type disease resistance protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold815_42434-46051' ' no hits & (original description: Putative At2g06890, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold816_273573-335738' '(at1g44000 : 247.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11911.1); Has 216 Blast hits to 212 proteins in 76 species: Archae - 0; Bacteria - 96; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 494.0) & (original description: Putative NYE1, Description = Protein STAY-GREEN, chloroplastic, PFAM = PF12638)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold817_20511-27617' '(at5g23200 : 466.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 932.0) & (original description: Putative PGSC0003DMG400021516, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold821_216980-242617' '(at5g23390 : 734.0) Plant protein of unknown function (DUF639); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF639 (InterPro:IPR006927); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF639) (TAIR:AT1G48840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68417 : 668.0) no description available & (reliability: 1468.0) & (original description: Putative BnaC07g30850D, Description = BnaC07g30850D protein, PFAM = PF04842)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold821_263823-272951' '(at5g08540 : 339.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 678.0) & (original description: Putative TCM_007647, Description = Uncharacterized protein isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold823_285771-290080' '(at5g06560 : 424.0) Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT3G11850.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68159 : 111.0) no description available & (reliability: 848.0) & (original description: Putative MYOB7, Description = Myosin-binding protein 7, PFAM = PF04576)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold834_3895-6536' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold840_420881-423622' '(at1g25400 : 82.4) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68440.1). & (reliability: 164.8) & (original description: Putative PGSC0003DMG400005982, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold841_282232-284713' ' no hits & (original description: Putative , Description = , PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold842_161812-166006' ' no hits & (original description: Putative , Description = , PFAM = PF00403)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold843_446410-472397' '(at1g29050 : 489.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 38 (TBL38); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 37 (TAIR:AT2G34070.1); Has 1347 Blast hits to 1329 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1344; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|72785 : 190.0) no description available & (reliability: 978.0) & (original description: Putative gal2, Description = Alpha galactosidase, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold843_524424-528115' '(at4g18540 : 580.0) unknown protein; Has 209 Blast hits to 205 proteins in 54 species: Archae - 0; Bacteria - 17; Metazoa - 2; Fungi - 150; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1160.0) & (original description: Putative BnaAnng30480D, Description = BnaAnng30480D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold844_227105-229352' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold850_243833-248274' '(at5g58600 : 444.0) Belongs to a large family of plant-specific genes of unknown function. Involved in resistance to the powdery mildew species Erysiphe cichoracearum and Erysiphe orontii, but not to the unrelated pathogens Pseudomonas syringae or Peronospora parasitica. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; POWDERY MILDEW RESISTANT 5 (PMR5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 45 (TAIR:AT2G30010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72785 : 167.0) no description available & (reliability: 888.0) & (original description: Putative PMR5, Description = Protein PMR5, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold851_3529-7843' ' no hits & (original description: Putative , Description = Homer protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold856_16799-19916' ' no hits & (original description: Putative Os03g45070, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold860_371737-397217' '(at4g27020 : 742.0) unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1484.0) & (original description: Putative Sb02g024000, Description = Putative uncharacterized protein Sb02g024000, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold860_430350-435426' '(at5g54890 : 460.0) RNA-binding CRS1 / YhbY (CRM) domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, C globular stage, F mature embryo stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain-containing protein (TAIR:AT4G31010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85815 : 88.3) no description available & (reliability: 920.0) & (original description: Putative CAF1, Description = CRS2-associated factor 1, PFAM = PF01985;PF01985)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold867_101983-104541' ' no hits & (original description: Putative PGSC0003DMG402013972, Description = , PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold867_102765-107879' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold872_258412-261074' ' no hits & (original description: Putative , Description = , PFAM = PF03732)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold875_292093-294302' ' no hits & (original description: Putative orf70A, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold875_490282-501722' ' no hits & (original description: Putative NAC3, Description = NAC transcription factor, PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold885_8352-18318' '(at4g14950 : 503.0) SNARE associated Golgi protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36325 : 316.0) no description available & (reliability: 1006.0) & (original description: Putative KMS1, Description = Vacuole membrane-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold892_279267-290058' ' (original description: Putative PDS2, Description = Phytoene desaturase 2, PFAM = PF01593)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold892_474974-489682' '(at1g45688 : 127.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative BnaA01g23570D, Description = BnaA01g23570D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold892_565045-568760' ' no hits & (original description: Putative Os11g0242700, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold897_314816-400725' ' no hits & (original description: Putative ACP1, Description = Acyl carrier protein 1, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold898_156066-164781' '(at1g27100 : 408.0) Actin cross-linking protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF569 (InterPro:IPR007679), Actin cross-linking (InterPro:IPR008999); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF569) (TAIR:AT1G69890.1); Has 362 Blast hits to 223 proteins in 29 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 10; Plants - 341; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|68182 : 222.0) no description available & (reliability: 816.0) & (original description: Putative At1g27100, Description = Actin cross-linking protein, PFAM = PF04601;PF04601;PF04601)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold898_277365-282287' '(at5g15120 : 282.0) Protein of unknown function (DUF1637); FUNCTIONS IN: cysteamine dioxygenase activity; INVOLVED IN: anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1637 (InterPro:IPR012864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1637) (TAIR:AT5G39890.1); Has 363 Blast hits to 363 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 103; Fungi - 0; Plants - 225; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|71286 : 274.0) no description available & (gnl|cdd|39482 : 256.0) no description available & (reliability: 564.0) & (original description: Putative BnaA03g05200D, Description = BnaA03g05200D protein, PFAM = PF07847)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold903_109659-116160' '(at1g01690 : 165.0) Encodes a novel plant-specific protein that is involved in meiotic double strand break formation.; putative recombination initiation defects 3 (PRD3); Has 279 Blast hits to 273 proteins in 87 species: Archae - 2; Bacteria - 106; Metazoa - 105; Fungi - 5; Plants - 32; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (q75ry2|pair1_orysa : 88.6) Protein PAIR1 (HOMOLOGOUS PAIRING ABERRATION IN RICE MEIOSIS 1 protein) - Oryza sativa (Rice) & (reliability: 330.0) & (original description: Putative TCM_005325, Description = Recombination initiation defects 3, putative isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold903_377335-477350' ' no hits & (original description: Putative str246N, Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold904_546545-549676' '(at1g76440 : 138.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G20870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative Ntshsp, Description = Small heat shock protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold905_143742-149547' ' no hits & (original description: Putative glysoja_044032, Description = , PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold905_143911-149329' ' no hits & (original description: Putative , Description = , PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold907_352838-358552' '(at1g48880 : 538.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 7 (TBL7); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT3G06080.2); Has 1333 Blast hits to 1318 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 1329; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 129.0) no description available & (reliability: 1076.0) & (original description: Putative Os05g0426300, Description = Os05g0426300 protein, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold910_273277-286093' '(at2g20390 : 210.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 420.0) & (original description: Putative Os02g0754800, Description = Os02g0754800 protein, PFAM = PF08695)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold918_317058-319679' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold918_526835-543196' '(at5g22450 : 482.0) unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 964.0) & (original description: Putative TCM_041427, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold918_529135-542742' '(at5g22450 : 291.0) unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 582.0) & (original description: Putative , Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold920_165550-168871' ' no hits & (original description: Putative PGSC0003DMG400027027, Description = , PFAM = PF05703;PF04733)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold920_488932-491658' '(at5g24600 : 208.0) Protein of unknown function, DUF599; INVOLVED IN: biological_process unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF599 (InterPro:IPR006747); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF599 (TAIR:AT3G18215.1). & (gnl|cdd|68233 : 158.0) no description available & (reliability: 416.0) & (original description: Putative At3g18215, Description = Uncharacterized protein isoform 1, PFAM = PF04654)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold927_356224-362041' '(at5g63440 : 327.0) Protein of unknown function (DUF167); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF167 (InterPro:IPR003746); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF167) (TAIR:AT1G49170.1); Has 732 Blast hits to 732 proteins in 300 species: Archae - 13; Bacteria - 428; Metazoa - 192; Fungi - 6; Plants - 66; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|38486 : 135.0) no description available & (reliability: 654.0) & (original description: Putative At5g63440, Description = UPF0235 protein At5g63440, PFAM = PF02594)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold928_279483-283465' '(gnl|cdd|68893 : 326.0) no description available & (at2g38070 : 325.0) Protein of unknown function (DUF740); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF740) (TAIR:AT3G09070.1); Has 108 Blast hits to 106 proteins in 27 species: Archae - 0; Bacteria - 3; Metazoa - 6; Fungi - 2; Plants - 76; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (reliability: 650.0) & (original description: Putative At3g09070, Description = UPF0503 protein At3g09070, chloroplastic, PFAM = PF05340)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold934_550540-553283' ' no hits & (original description: Putative , Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold936_240767-243561' ' no hits & (original description: Putative , Description = , PFAM = PF02977)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold937_172819-298751' ' (original description: Putative KGM_13952, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = PF03372;PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold938_273150-278606' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold945_346919-382373' '(at1g55325 : 1895.0) Encodes the Arabidopsis homolog of the transcriptional regulator MED13, is dynamically expressed during embryogenesis and regulates both developmental timing and the radial pattern formation.; GRAND CENTRAL (GCT); FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of development, heterochronic, regulation of radial pattern formation; LOCATED IN: mediator complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med13 (InterPro:IPR009401). & (gnl|cdd|69831 : 92.5) no description available & (gnl|cdd|38806 : 82.1) no description available & (reliability: 3790.0) & (original description: Putative MED13, Description = Mediator of RNA polymerase II transcription subunit 13, PFAM = PF06333)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold950_102860-106845' '(at1g75140 : 598.0) unknown protein; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19370.1); Has 51 Blast hits to 49 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 1196.0) & (original description: Putative At1g75140, Description = Uncharacterized membrane protein At1g75140, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold952_495112-497531' ' (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold957_48079-53729' '(at4g08940 : 453.0) Ubiquitin carboxyl-terminal hydrolase family protein; CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant (InterPro:IPR021099); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein (TAIR:AT4G01037.1); Has 405 Blast hits to 399 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 405; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 906.0) & (original description: Putative At4g08940, Description = At4g08940, PFAM = PF11955)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold965_11377-20643' '(at5g07960 : 133.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0139 (InterPro:IPR005351); Has 193 Blast hits to 193 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|38672 : 99.7) no description available & (gnl|cdd|67295 : 96.3) no description available & (reliability: 266.0) & (original description: Putative LOC100280603, Description = PTD008 protein, PFAM = PF03669)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold965_421431-789609' '(at3g18240 : 227.0) Ribosomal protein S24/S35, mitochondrial; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Ribosomal protein S24/S35, mitochondrial (InterPro:IPR019349); BEST Arabidopsis thaliana protein match is: Ribosomal protein S24/S35, mitochondrial (TAIR:AT4G21460.1); Has 302 Blast hits to 286 proteins in 105 species: Archae - 0; Bacteria - 67; Metazoa - 57; Fungi - 33; Plants - 60; Viruses - 2; Other Eukaryotes - 83 (source: NCBI BLink). & (gnl|cdd|39136 : 121.0) no description available & (reliability: 454.0) & (original description: Putative At3g18240, Description = AT3G18240 protein, PFAM = PF10213)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold974_459861-466785' '(at1g55340 : 118.0) Protein of unknown function (DUF1639); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1639 (InterPro:IPR012438); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1639) (TAIR:AT3G03880.1); Has 250 Blast hits to 247 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 250; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative At4g20300, Description = Os05g0556500 protein, PFAM = PF07797)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold975_4248-21936' '(at2g44760 : 506.0) CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF3598 (InterPro:IPR022017); Has 41 Blast hits to 35 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1012.0) & (original description: Putative , Description = Domain of Uncharacterized protein function, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold979_89409-96811' '(at1g64600 : 621.0) methyltransferases;copper ion binding; FUNCTIONS IN: methyltransferase activity, copper ion binding; INVOLVED IN: translation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein Rsm22, bacterial-type (InterPro:IPR015324), Cytochrome c oxidase assembly protein CtaG/Cox11 (InterPro:IPR007533); Has 735 Blast hits to 687 proteins in 272 species: Archae - 0; Bacteria - 212; Metazoa - 195; Fungi - 160; Plants - 44; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|37750 : 219.0) no description available & (gnl|cdd|72659 : 165.0) no description available & (reliability: 1242.0) & (original description: Putative At1g64600, Description = At1g64600, PFAM = PF09243;PF09243)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold982_9618-15631' ' (original description: Putative serB, Description = Protein ApaG, PFAM = PF04379;PF02151;PF02151)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold988_142698-145021' ' no hits & (original description: Putative , Description = , PFAM = PF02362)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold994_4070-6597' ' no hits & (original description: Putative Dif54, Description = Extensin-like protein Dif54, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold995_537087-544001' '(at3g44150 : 342.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11800.1); Has 76 Blast hits to 75 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 684.0) & (original description: Putative BnaA06g38910D, Description = BnaA06g38910D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1004_78136-80474' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1004_435648-438154' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1006_20676-23440' ' no hits & (original description: Putative PGSC0003DMG400002456, Description = Cysteine-rich extensin-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1006_369874-372452' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1007_220434-243087' '(at5g49150 : 920.0) Encodes a transmembrane domain containing protein expressed in sperm cells.; gamete expressed 2 (GEX2); CONTAINS InterPro DOMAIN/s: Filamin/ABP280 repeat (InterPro:IPR001298), Immunoglobulin-like fold (InterPro:IPR013783), Immunoglobulin E-set (InterPro:IPR014756), Filamin/ABP280 repeat-like (InterPro:IPR017868); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1840.0) & (original description: Putative GEX2, Description = Protein GAMETE EXPRESSED 2, PFAM = PF00630;PF00630)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1010_228285-242424' '(at1g30580 : 671.0) GTP binding; FUNCTIONS IN: GTP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF933 (InterPro:IPR013029), TGS-like (InterPro:IPR012676), GTP1/OBG (InterPro:IPR006073), Conserved hypothetical protein CHP00092 (InterPro:IPR004396), GTP-binding protein, HSR1-related (InterPro:IPR002917), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: GTP-binding protein-related (TAIR:AT1G56050.1); Has 19150 Blast hits to 19146 proteins in 3028 species: Archae - 362; Bacteria - 11244; Metazoa - 716; Fungi - 612; Plants - 292; Viruses - 0; Other Eukaryotes - 5924 (source: NCBI BLink). & (gnl|cdd|36704 : 544.0) no description available & (gnl|cdd|57983 : 542.0) no description available & (reliability: 1342.0) & (original description: Putative OLA1, Description = Obg-like ATPase 1, PFAM = PF01926;PF06071)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1019_217973-321030' ' no hits & (original description: Putative RBE, Description = Palmate-like pentafoliata 1 transcription factor, PFAM = PF13912)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1022_127773-133176' ' no hits & (original description: Putative , Description = Zinc finger containing preotein, putative, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1026_511337-527080' ' no hits & (original description: Putative PGSC0003DMG400004762, Description = BAC19.10, PFAM = PF04801)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1028_500969-507838' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1031_462659-465108' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1034_38192-40626' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1037_271230-278081' '(at5g55610 : 250.0) unknown protein; LOCATED IN: mitochondrion, plastid, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 500.0) & (original description: Putative At5g55610, Description = Putative uncharacterized protein At5g55610, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1044_407982-514802' ' (original description: Putative PGSC0003DMG400014084, Description = ABI five-binding protein, PFAM = PF16135)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1052_246487-266897' ' no hits & (original description: Putative , Description = , PFAM = PF03108)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1053_509-4902' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1053_407610-425356' '(at1g21350 : 362.0) Thioredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|48518 : 250.0) no description available & (reliability: 724.0) & (original description: Putative GK1635, Description = Hypothetical conserved protein, PFAM = PF00578)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1053_571004-587067' '(at1g77220 : 723.0) Protein of unknown function (DUF300); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT4G38360.2); Has 852 Blast hits to 850 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 289; Fungi - 195; Plants - 246; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|37852 : 303.0) no description available & (gnl|cdd|67249 : 297.0) no description available & (reliability: 1446.0) & (original description: Putative At1g77220, Description = Protein LAZ1 homolog 1, PFAM = PF03619)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1056_489498-494319' ' no hits & (original description: Putative , Description = , PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1066_364840-367403' ' no hits & (original description: Putative , Description = , PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1072_470823-476038' '(at5g26749 : 130.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, U1-C type (InterPro:IPR013085), Zinc finger, U1-type (InterPro:IPR003604). & (reliability: 260.0) & (original description: Putative At5g26749, Description = Nucleic acid binding / zinc ion binding protein, PFAM = PF00642;PF06220)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1073_28541-31713' '(at2g24950 : 121.0) Protein of Unknown Function (DUF239); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT4G15050.1); Has 643 Blast hits to 610 proteins in 23 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 632; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative PGSC0003DMG400040721, Description = Predicted protein, PFAM = PF14365)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1076_202508-205064' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1076_343084-348064' '(at2g21350 : 141.0) RNA-binding CRS1 / YhbY (CRM) domain protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain protein (TAIR:AT4G39040.2); Has 1900 Blast hits to 1900 proteins in 975 species: Archae - 2; Bacteria - 1806; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|85815 : 82.5) no description available & (reliability: 282.0) & (original description: Putative At2g21350, Description = RNA-binding CRS1 / YhbY (CRM) domain protein, PFAM = PF01985)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1081_517711-524355' '(at5g19400 : 716.0) Encodes SMG7, a protein that possesses an evolutionarily conserved EST1 domain and exhibits strong homology to human SMG6 (EST1A) and SMG7 (EST1C) proteins. SMG7 plays an evolutionarily conserved role in nonsense-mediated RNA decay (NMD). Required for exit from meiosis. Hypomorphic smg7 alleles render mutant plants sterile by causing an unusual cell-cycle arrest in anaphase II that is characterized by delayed chromosome decondensation and aberrant rearrangement of the meiotic spindle. Disruption of SMG7 causes embryonic lethality.; SMG7; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: meiosis, spindle assembly involved in meiosis, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Telomerase activating protein Est1 (InterPro:IPR019458); BEST Arabidopsis thaliana protein match is: Telomerase activating protein Est1 (TAIR:AT1G28260.2). & (gnl|cdd|37373 : 237.0) no description available & (reliability: 1432.0) & (original description: Putative SMG7, Description = Protein SMG7, PFAM = PF10373;PF10374)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1083_68197-77054' ' (original description: Putative , Description = Kinesin-like protein KIF27, PFAM = PF10343)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1084_242149-245096' ' no hits & (original description: Putative PGSC0003DMG400021709, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1087_489341-496565' '(at1g08530 : 216.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09995.2); Has 140 Blast hits to 140 proteins in 53 species: Archae - 0; Bacteria - 63; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative At1g08530, Description = Putative uncharacterized protein At1g08530, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1103_159246-167775' '(at5g48340 : 452.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages. & (reliability: 904.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1103_319260-321462' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Retrovirus-related Pol polyprotein LINE-1, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1104_458544-466689' ' no hits & (original description: Putative , Description = , PFAM = PF00035;PF00035)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1107_42258-45208' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1109_254775-257608' '(at5g45610 : 130.0) Encodes a homologue of the ATR-interacting protein ATRIP. Mutant (named sensitive to UV2 or suv2) is UVB-hypersensitive and defective in DNA damage response.; SENSITIVE TO UV 2 (SUV2); Has 65 Blast hits to 63 proteins in 29 species: Archae - 0; Bacteria - 2; Metazoa - 9; Fungi - 13; Plants - 35; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative SUV2, Description = Dimerizations, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1110_402062-404445' '(atmg00300 : 117.0) hypothetical protein; Gag-Pol-related retrotransposon family protein. & (p10978|polx_tobac : 95.1) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco) & (reliability: 234.0) & (original description: Putative AtMg00300, Description = Uncharacterized mitochondrial protein AtMg00300, PFAM = PF13976)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1111_234063-237052' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1113_321988-455443' '(at3g63540 : 228.0) Conceptual translation of this open reading frame gave the sequence of a 229-residue hypothetical protein that contains the same sequence as the mature A. thaliana chloroplast luminal 19-kDa protein linked to a putative signal sequence.; Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: oxygen evolving complex, extrinsic to membrane; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123). & (reliability: 456.0) & (original description: Putative TEL3S, Description = Thylakoid lumenal 19 kDa protein, PFAM = PF01789)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1114_33352-447327' ' (original description: Putative RT, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1120_326103-328651' ' no hits & (original description: Putative , Description = Putative E3 ubiquitin-protein ligase RHA2B-like, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1132_429126-436004' '(at2g07170 : 652.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G27210.1); Has 437 Blast hits to 391 proteins in 95 species: Archae - 6; Bacteria - 71; Metazoa - 26; Fungi - 88; Plants - 186; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (reliability: 1304.0) & (original description: Putative At2g07170, Description = ARM repeat superfamily protein, PFAM = PF12765)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1133_49236-51917' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1133_455656-466703' '(at1g31300 : 378.0) TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT4G19645.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69487 : 280.0) no description available & (gnl|cdd|39761 : 178.0) no description available & (reliability: 756.0) & (original description: Putative TdLFC39, Description = Putative TdLFC39 protein, PFAM = PF03798)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1139_210110-362345' '(at3g02860 : 183.0) zinc ion binding; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880); Has 2461 Blast hits to 1944 proteins in 239 species: Archae - 0; Bacteria - 112; Metazoa - 958; Fungi - 273; Plants - 97; Viruses - 6; Other Eukaryotes - 1015 (source: NCBI BLink). & (gnl|cdd|38242 : 126.0) no description available & (reliability: 366.0) & (original description: Putative ZNF1, Description = Zinc finger protein 830-like protein, PFAM = PF12874)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1145_336552-346129' '(at2g40070 : 157.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1); Has 108635 Blast hits to 60786 proteins in 2176 species: Archae - 287; Bacteria - 15142; Metazoa - 39415; Fungi - 26849; Plants - 4416; Viruses - 2864; Other Eukaryotes - 19662 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative At2g40070, Description = At2g40070, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1149_223094-226022' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1154_91818-101391' '(at3g46220 : 768.0) unknown protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2042 (InterPro:IPR018611). & (gnl|cdd|37446 : 570.0) no description available & (reliability: 1536.0) & (original description: Putative At3g46220, Description = E3 UFM1-protein ligase 1 homolog, PFAM = PF09743)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1154_221151-223621' '(at5g02640 : 82.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1155_453739-459835' '(at1g21722 : 95.9) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78922.1); Has 47 Blast hits to 47 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 1; Plants - 42; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1159_69572-187754' ' (original description: Putative PGSC0003DMG400041390, Description = , PFAM = PF05938)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1168_205663-208744' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1168_483966-491350' ' no hits & (original description: Putative GCL1, Description = Polyadenylate-binding protein 2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1171_90764-93650' '(at1g33800 : 308.0) Protein of unknown function (DUF579); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF579 (InterPro:IPR021148), Conserved hypothetical protein CHP01627 (InterPro:IPR006514); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF579) (TAIR:AT4G09990.1); Has 252 Blast hits to 251 proteins in 20 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 240; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|68247 : 307.0) no description available & (reliability: 616.0) & (original description: Putative GXM3, Description = Glucuronoxylan methyltransferase 3, PFAM = PF04669)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1175_44515-46899' ' no hits & (original description: Putative PGSC0003DMG400033092, Description = SRF-type transcription factor family protein, PFAM = PF00319)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1179_400225-403482' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1190_49610-53839' '(at5g17460 : 319.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress. & (reliability: 638.0) & (original description: Putative At5g17460, Description = Putative uncharacterized protein At5g17460, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1191_159257-162006' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1192_359904-362905' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1193_451671-454366' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1193_452055-454393' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1195_132765-143208' ' no hits & (original description: Putative PGSC0003DMG400000036, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1195_150432-156125' '(at3g61320 : 499.0) Bestrophin-like protein; CONTAINS InterPro DOMAIN/s: Bestrophin-like (InterPro:IPR021134); BEST Arabidopsis thaliana protein match is: Bestrophin-like protein (TAIR:AT2G45870.1); Has 1448 Blast hits to 1447 proteins in 512 species: Archae - 0; Bacteria - 1140; Metazoa - 0; Fungi - 113; Plants - 120; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|68809 : 278.0) no description available & (reliability: 998.0) & (original description: Putative At3g61320, Description = UPF0187 protein At3g61320, chloroplastic, PFAM = PF01062)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1199_123130-142307' ' (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1207_32367-41906' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1207_190012-320601' ' (original description: Putative LgRT22, Description = Reverse transcriptases, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1207_191397-320684' ' (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1210_65751-68341' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1222_285964-296791' ' no hits & (original description: Putative PGSC0003DMG400010079, Description = , PFAM = PF02362;PF02362)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1223_170377-288086' '(at5g42210 : 117.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G16970.1); Has 1412 Blast hits to 1411 proteins in 523 species: Archae - 2; Bacteria - 866; Metazoa - 276; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 179 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative ttpl1, Description = Putative hippocampus abundant transcript-like protein 1-like, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1231_383854-403669' '(at1g78915 : 317.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734). & (reliability: 634.0) & (original description: Putative Os07g0287100, Description = Os07g0287100 protein, PFAM = PF13174;PF13432)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1234_398797-404216' '(at3g48120 : 96.3) unknown protein; Has 22990 Blast hits to 12942 proteins in 666 species: Archae - 8; Bacteria - 739; Metazoa - 13803; Fungi - 2465; Plants - 1363; Viruses - 116; Other Eukaryotes - 4496 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1237_425258-431788' '(at1g22850 : 279.0) SNARE associated Golgi protein family; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT1G03260.1); Has 4604 Blast hits to 4604 proteins in 1169 species: Archae - 23; Bacteria - 2889; Metazoa - 197; Fungi - 87; Plants - 283; Viruses - 0; Other Eukaryotes - 1125 (source: NCBI BLink). & (gnl|cdd|38350 : 134.0) no description available & (gnl|cdd|30747 : 118.0) no description available & (reliability: 558.0) & (original description: Putative RB11207, Description = SNARE associated Golgi family protein, PFAM = PF09335)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1243_173196-177233' ' no hits & (original description: Putative TER1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1245_415593-419155' ' no hits & (original description: Putative , Description = PH01B031C15.25 protein, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1245_416715-419341' ' no hits & (original description: Putative , Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1249_84862-97319' '(at1g78810 : 107.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative glysoja_038102, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1250_41578-44932' ' no hits & (original description: Putative , Description = , PFAM = PF06200)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1250_321760-334587' '(at5g16610 : 369.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 738.0) & (original description: Putative Sb01g042570, Description = No apical meristem protein, expressed, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1255_480338-482757' ' no hits & (original description: Putative pol, Description = Polyprotein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1265_32533-37980' '(at5g20610 : 687.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26160.1); Has 918 Blast hits to 759 proteins in 180 species: Archae - 6; Bacteria - 105; Metazoa - 264; Fungi - 89; Plants - 167; Viruses - 5; Other Eukaryotes - 282 (source: NCBI BLink). & (reliability: 1374.0) & (original description: Putative BnaC09g37250D, Description = BnaC09g37250D protein, PFAM = PF01476;PF10358)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1276_185319-189840' '(at5g59020 : 243.0) Protein of unknown function (DUF3527); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3527 (InterPro:IPR021916); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3527) (TAIR:AT2G29510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative , Description = , PFAM = PF12043;PF12043)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1276_309965-316050' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1283_2051-13533' '(at1g70770 : 533.0) Protein of unknown function DUF2359, transmembrane; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endoplasmic reticulum, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2359, transmembrane (InterPro:IPR019308); BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF2359, transmembrane (TAIR:AT1G23170.2). & (gnl|cdd|39668 : 452.0) no description available & (reliability: 1066.0) & (original description: Putative BnaC06g31910D, Description = BnaC06g31910D protein, PFAM = PF10151)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1295_52126-55511' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1300_426952-429357' ' no hits & (original description: Putative PGSC0003DMG400020609, Description = Voltage-dependent T-type calcium channel subunit alpha-1I, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1301_7611-13227' '(at4g13200 : 90.5) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 97 Blast hits to 97 proteins in 46 species: Archae - 0; Bacteria - 65; Metazoa - 2; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative si707103b11b, Description = Uncharacterized protein At4g13200, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1301_293985-296593' ' no hits & (original description: Putative KNU, Description = EPF-type Cis2-His2 zinc finger transcription factor, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1304_1-5834' '(at2g20760 : 157.0) Clathrin light chain protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin light chain (InterPro:IPR000996); BEST Arabidopsis thaliana protein match is: Clathrin light chain protein (TAIR:AT2G40060.1); Has 1791 Blast hits to 1279 proteins in 282 species: Archae - 0; Bacteria - 563; Metazoa - 557; Fungi - 96; Plants - 161; Viruses - 0; Other Eukaryotes - 414 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative CLC1, Description = Clathrin light chain protein, PFAM = PF01086)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1305_137334-144638' '(at1g26180 : 289.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2232, membrane (InterPro:IPR018710); Has 285 Blast hits to 285 proteins in 90 species: Archae - 0; Bacteria - 140; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (reliability: 578.0) & (original description: Putative At1g26180, Description = Putative uncharacterized protein At1g26180, PFAM = PF09991)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1305_138627-144521' '(at1g26180 : 157.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2232, membrane (InterPro:IPR018710); Has 285 Blast hits to 285 proteins in 90 species: Archae - 0; Bacteria - 140; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative pco133450, Description = BnaA08g19610D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1305_354700-357686' '(at3g25590 : 84.3) unknown protein; Has 149 Blast hits to 140 proteins in 44 species: Archae - 0; Bacteria - 6; Metazoa - 40; Fungi - 6; Plants - 39; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1311_146219-148671' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1314_310854-411865' ' (original description: Putative LgRT4, Description = Reverse transcriptases, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1316_91181-99474' '(at5g16030 : 176.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative At3g02500, Description = BnaA03g05810D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1320_442238-448841' ' no hits & (original description: Putative , Description = , PFAM = PF13975)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1326_337567-342720' '(at5g49710 : 181.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24590.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative BnaC07g39040D, Description = BnaC07g39040D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1328_279421-283607' ' no hits & (original description: Putative TCM_005434, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1329_465274-467873' '(at4g28310 : 114.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative PGSC0003DMG400013144, Description = Os06g0115700 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1331_343302-366763' '(at5g47690 : 822.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: cotyledon, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G77600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36738 : 403.0) no description available & (reliability: 1644.0) & (original description: Putative glysoja_004575, Description = Sister chromatid cohesion protein PDS5 like A, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1331_352995-356612' '(at5g47690 : 320.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: cotyledon, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G77600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 640.0) & (original description: Putative At5g47690, Description = Sister chromatid cohesion PDS5-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1340_45168-51177' '(at3g11680 : 355.0) Aluminium activated malate transporter family protein; INVOLVED IN: response to aluminum ion; CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G08440.1); Has 773 Blast hits to 771 proteins in 231 species: Archae - 0; Bacteria - 374; Metazoa - 0; Fungi - 30; Plants - 352; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|39909 : 311.0) no description available & (gnl|cdd|85194 : 148.0) no description available & (reliability: 710.0) & (original description: Putative ALMT8, Description = Aluminum-activated malate transporter 8, PFAM = PF11744)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1353_341049-352533' '(at4g32620 : 760.0) Enhancer of polycomb-like transcription factor protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tudor domain (InterPro:IPR002999), Enhancer of polycomb-like (InterPro:IPR019542); BEST Arabidopsis thaliana protein match is: Enhancer of polycomb-like transcription factor protein (TAIR:AT5G04670.1); Has 578 Blast hits to 531 proteins in 105 species: Archae - 0; Bacteria - 30; Metazoa - 78; Fungi - 45; Plants - 268; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (reliability: 1520.0) & (original description: Putative , Description = Enhancer of polycomb-like protein, PFAM = PF10513)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1354_274495-302562' '(at5g65180 : 216.0) ENTH/VHS family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT5G10060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37880 : 167.0) no description available & (gnl|cdd|48659 : 121.0) no description available & (reliability: 432.0) & (original description: Putative Crept, Description = Regulation of nuclear pre-mRNA domain-containing protein 1B, PFAM = PF04818)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1355_164428-166836' ' no hits & (original description: Putative LIPM, Description = Lipase, PFAM = PF04083)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1359_416471-418938' '(at5g02640 : 88.2) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1366_158709-171679' '(at3g24255 : 248.0) RNA-directed DNA polymerase (reverse transcriptase)-related family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23910.1); Has 169 Blast hits to 169 proteins in 55 species: Archae - 8; Bacteria - 18; Metazoa - 36; Fungi - 11; Plants - 53; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (reliability: 496.0) & (original description: Putative BnaA07g06140D, Description = BnaA07g06140D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1368_408587-411198' '(at5g47920 : 108.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative , Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1380_167843-171110' ' no hits & (original description: Putative NtC7, Description = Membrane located receptor-like protein, PFAM = PF13947;PF14380)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1383_251733-255967' '(at5g51200 : 125.0) Protein of unknown function (DUF3414); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3414 (InterPro:IPR021827); Has 203 Blast hits to 190 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 120; Fungi - 18; Plants - 55; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative NUP205, Description = BnaA07g12820D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1386_973-6690' ' no hits & (original description: Putative Os03g0703300, Description = Os03g0703300 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1390_1-8668' '(at5g05310 : 296.0) TLC ATP/ADP transporter; Has 647 Blast hits to 643 proteins in 131 species: Archae - 0; Bacteria - 265; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (reliability: 592.0) & (original description: Putative Os12g0112300, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1390_85462-89843' '(at3g10940 : 382.0) dual specificity protein phosphatase (DsPTP1) family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine/serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, dephosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: dual specificity protein phosphatase (DsPTP1) family protein (TAIR:AT3G52180.2); Has 897 Blast hits to 897 proteins in 122 species: Archae - 6; Bacteria - 12; Metazoa - 607; Fungi - 18; Plants - 142; Viruses - 11; Other Eukaryotes - 101 (source: NCBI BLink). & (gnl|cdd|36928 : 114.0) no description available & (reliability: 764.0) & (original description: Putative LSF2, Description = Phosphoglucan phosphatase LSF2, chloroplastic, PFAM = PF00782)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1392_142285-144674' ' no hits & (original description: Putative INH3, Description = Inhibitor-3, PFAM = PF07491)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1394_307178-309724' ' no hits & (original description: Putative , Description = Putative membrane-associated kinase regulator 1-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1397_201342-203764' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1405_232174-234770' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1405_425884-428288' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1406_71592-74632' '(at1g15190 : 88.2) Fasciclin-like arabinogalactan family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); Has 106 Blast hits to 85 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 106; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative PGSC0003DMG400035592, Description = Fasciclin-like arabinogalactan protein 18, putative, PFAM = PF02469)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1409_341316-343767' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1423_436383-440265' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1428_385807-389334' ' (original description: Putative RT, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1430_92461-95956' '(gnl|cdd|38177 : 274.0) no description available & (at2g23790 : 258.0) Protein of unknown function (DUF607); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF607 (InterPro:IPR006769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF607) (TAIR:AT4G36820.1); Has 364 Blast hits to 364 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 147; Fungi - 45; Plants - 131; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|68256 : 226.0) no description available & (reliability: 516.0) & (original description: Putative At5g42610, Description = Calcium uniporter protein 4, mitochondrial, PFAM = PF04678)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1436_181026-184576' ' no hits & (original description: Putative PGSC0003DMG400028120, Description = Phytochrome kinase substrate-related family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1439_33267-35676' ' no hits & (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1439_34949-37958' ' (original description: Putative , Description = DNA/RNA polymerases superfamily protein, PFAM = PF00098;PF08284)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1439_35315-38153' ' no hits & (original description: Putative , Description = , PFAM = PF08284;PF00098)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1439_35677-38096' ' no hits & (original description: Putative , Description = DNA/RNA polymerases superfamily protein, PFAM = PF08284)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1439_80519-373455' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Putative reverse transcriptase family member, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1440_293087-308873' '(at1g05780 : 134.0) Vacuolar ATPase assembly integral membrane protein VMA21-like domain; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Vacuolar ATPase assembly integral membrane protein VMA21-like domain (InterPro:IPR019013); BEST Arabidopsis thaliana protein match is: Vacuolar ATPase assembly integral membrane protein VMA21-like domain (TAIR:AT2G31710.1); Has 33 Blast hits to 33 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative At1g05780, Description = Vacuolar ATPase assembly integral membrane protein VMA21 homolog, PFAM = PF09446)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1449_107377-118204' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1453_399610-401864' ' no hits & (original description: Putative PGSC0003DMG401022984, Description = At1g30260/F12P21_9, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1454_73592-75983' ' no hits & (original description: Putative orf134b, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1455_165902-167946' ' no hits & (original description: Putative At5g66230, Description = At5g66230, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1457_10300-18641' '(at4g39900 : 114.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative TCM_001111, Description = Uncharacterized protein isoform 3, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1465_363741-410650' ' no hits & (original description: Putative Dif54, Description = BnaA07g31240D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1467_162654-170174' '(at2g26200 : 232.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410), Methyltransferase type 12 (InterPro:IPR013217); BEST Arabidopsis thaliana protein match is: Methyltransferase family protein (TAIR:AT1G54650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37572 : 207.0) no description available & (reliability: 464.0) & (original description: Putative ORF01, Description = S-adenosyl-L-methionine-dependent methyltransferases superfamily protein isoform 1, PFAM = PF08242)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1477_296315-302615' ' no hits & (original description: Putative , Description = , PFAM = PF15365)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1479_189739-193205' '(at4g39840 : 305.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 20719 Blast hits to 6096 proteins in 607 species: Archae - 22; Bacteria - 3243; Metazoa - 4364; Fungi - 2270; Plants - 237; Viruses - 128; Other Eukaryotes - 10455 (source: NCBI BLink). & (reliability: 610.0) & (original description: Putative BnaA01g34680D, Description = BnaA01g34680D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1480_418459-421461' ' no hits & (original description: Putative 1, Description = X intrinsic protein, PFAM = PF00230)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1483_67616-100854' '(at4g19490 : 1057.0) Putative homolog of yeast Vps54. Thought to associate with POK and ATVPS53 in a plant GARP-like complex involved in the membrane trafficking system.; VPS54; INVOLVED IN: retrograde transport, endosome to Golgi; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515), Vps54-like (InterPro:IPR012501); Has 471 Blast hits to 377 proteins in 168 species: Archae - 2; Bacteria - 4; Metazoa - 149; Fungi - 188; Plants - 45; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (gnl|cdd|37326 : 476.0) no description available & (gnl|cdd|71365 : 154.0) no description available & (reliability: 2114.0) & (original description: Putative VPS54, Description = Vacuolar protein sorting-associated protein 54, chloroplastic, PFAM = PF07928)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1494_81636-148183' '(at5g67550 : 161.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71110.1); Has 161 Blast hits to 154 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative PGSC0003DMG400014614, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1495_248096-251924' '(at5g64230 : 248.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 496.0) & (original description: Putative MTR_2g008960, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1497_19663-23137' '(at3g24255 : 136.0) RNA-directed DNA polymerase (reverse transcriptase)-related family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23910.1); Has 169 Blast hits to 169 proteins in 55 species: Archae - 8; Bacteria - 18; Metazoa - 36; Fungi - 11; Plants - 53; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative PGSC0003DMG400012595, Description = Non-LTR retroelement reverse transcriptase-like protein, related, PFAM = PF13966;PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1499_210427-218148' '(at2g29620 : 93.2) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G07330.1); Has 887 Blast hits to 750 proteins in 151 species: Archae - 2; Bacteria - 63; Metazoa - 270; Fungi - 51; Plants - 111; Viruses - 6; Other Eukaryotes - 384 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative PGSC0003DMG400004163, Description = F22G5.33, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1505_335564-342151' ' (original description: Putative , Description = Predicted protein, PFAM = PF10343)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1515_207013-209432' ' no hits & (original description: Putative , Description = , PFAM = PF05340)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1525_74563-82994' '(at4g39900 : 106.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative PGSC0003DMG400001876, Description = Uncharacterized protein isoform 3, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1528_147348-158519' '(at4g22190 : 139.0) unknown protein; Has 283 Blast hits to 154 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 24; Fungi - 12; Plants - 48; Viruses - 0; Other Eukaryotes - 197 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative , Description = Serine/arginine repetitive matrix protein 2, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1534_40163-55051' '(at1g26330 : 318.0) DNA binding; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), FY-rich, C-terminal (InterPro:IPR003889), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943). & (reliability: 636.0) & (original description: Putative At1g26330, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1534_126905-401038' ' (original description: Putative Os03g0598200, Description = Nucleolar protein 14, PFAM = PF04147)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1546_414255-416656' ' no hits & (original description: Putative PGSC0003DMG400045123, Description = Zinc finger containing preotein, putative, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1546_414297-424233' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1548_199508-233118' ' no hits & (original description: Putative nsLTP, Description = Non-specific lipid-transfer protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1557_322697-329691' '(at1g73320 : 229.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G08125.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative At1g73320, Description = Methyltransferase-like protein 21D, PFAM = PF10294)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1559_353494-356037' ' no hits & (original description: Putative MTR_5g061150, Description = Copia-like polyprotein/retrotransposon, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1561_1-11813' '(at4g10890 : 102.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439 (InterPro:IPR018838); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative , Description = , PFAM = PF10382;PF10382)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1561_67998-71329' ' no hits & (original description: Putative , Description = , PFAM = PF02892)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1574_353990-360168' '(at1g68220 : 246.0) Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT1G52910.1); Has 508 Blast hits to 508 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70227 : 108.0) no description available & (reliability: 492.0) & (original description: Putative 1G01, Description = Putative uncharacterized protein 1G01, PFAM = PF06749)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1574_425034-435440' '(at2g01220 : 559.0) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.1); Has 429 Blast hits to 422 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 76; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink). & (reliability: 1118.0) & (original description: Putative BnaC07g20630D, Description = BnaC07g20630D protein, PFAM = PF01467)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1575_386140-390749' '(gnl|cdd|69222 : 611.0) no description available & (at5g23850 : 595.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF821) (TAIR:AT3G48980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37669 : 558.0) no description available & (reliability: 1190.0) & (original description: Putative GT90C7, Description = Glycosyltransferase, CAZy family GT90, PFAM = PF05686)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1590_41357-75571' '(at3g25400 : 142.0) CONTAINS InterPro DOMAIN/s: NTP Pyrophosphohydrolase MazG-related, RS21-C6 (InterPro:IPR011394), EAR (InterPro:IPR009039), NTP pyrophosphohydrolase MazG, putative catalytic core (InterPro:IPR004518); Has 1123 Blast hits to 1121 proteins in 452 species: Archae - 22; Bacteria - 753; Metazoa - 81; Fungi - 3; Plants - 83; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative dctpp1, Description = Nucleotide pyrophosphohydrolase, PFAM = PF12643)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1593_19089-60756' '(at5g08320 : 154.0) CONTAINS InterPro DOMAIN/s: E2F-associated phosphoprotein, C-terminal (InterPro:IPR019370); Has 149 Blast hits to 149 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|38605 : 98.7) no description available & (reliability: 308.0) & (original description: Putative pfd5, Description = Prefoldin 5, PFAM = PF10238)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1597_12548-108999' ' (original description: Putative erf, Description = Ethylene-responsive transcription factor RAP2-11, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1598_266820-278307' ' (original description: Putative PGSC0003DMG400012634, Description = Predicted protein, PFAM = PF03023)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1601_150043-155530' '(at4g24900 : 287.0) unknown protein; Has 119 Blast hits to 96 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 574.0) & (original description: Putative TTL, Description = TITAN-like protein, PFAM = PF14968)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1614_218232-221429' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1619_373751-383521' '(at4g00026 : 268.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim21 (InterPro:IPR013261); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|71727 : 82.2) no description available & (reliability: 536.0) & (original description: Putative TIM21, Description = Probable mitochondrial import inner membrane translocase subunit TIM21, PFAM = PF08294)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1620_136763-199857' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1637_315656-361890' '(gnl|cdd|37246 : 155.0) no description available & (at5g27740 : 142.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 2775 (EMB2775); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp-loader complex, subunit E, C-terminal (InterPro:IPR019483), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921); BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA) (TAIR:AT1G21690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative Os10g0574500, Description = Os10g0574500 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1640_117605-415726' ' no hits & (original description: Putative , Description = Gag/pol polyprotein, 3'-partial, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1640_359086-365475' '(at4g35920 : 558.0) Encodes an integral plasma membrane protein. Functionally complements the yeast mid1 mutant, a deficiency of Ca2+ influx. Involved in Ca2+ influx and mechanical sensing in roots. An over-expression line showed increased Ca2+ uptake than the wild type plant. The primary root of a knock-out mutant failed to penetrate a harder agar medium from a softer medium.; mid1-complementing activity 1 (MCA1); CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT2G17780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86720 : 93.9) no description available & (reliability: 1116.0) & (original description: Putative MCA1, Description = Protein MID1-COMPLEMENTING ACTIVITY 1, PFAM = PF04749)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1641_217040-230681' '(at2g04235 : 167.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 713 Blast hits to 345 proteins in 122 species: Archae - 2; Bacteria - 262; Metazoa - 138; Fungi - 55; Plants - 39; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative BnaCnng00500D, Description = BnaCnng00500D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1643_289743-292573' '(at5g19260 : 94.7) Protein of unknown function (DUF3049); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) (TAIR:AT3G06020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative glysoja_028362, Description = Protein FANTASTIC FOUR 3, PFAM = PF11250)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1646_154845-164531' '(at1g61240 : 470.0) Protein of unknown function (DUF707); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G11170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68772 : 302.0) no description available & (reliability: 940.0) & (original description: Putative At1g61240, Description = At1g61240, PFAM = PF05212)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1659_269754-276955' '(at1g64570 : 313.0) DUO POLLEN 3 (DUO3); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057); Has 1836 Blast hits to 1575 proteins in 289 species: Archae - 4; Bacteria - 248; Metazoa - 589; Fungi - 287; Plants - 112; Viruses - 46; Other Eukaryotes - 550 (source: NCBI BLink). & (reliability: 626.0) & (original description: Putative DUO3, Description = 30S ribosomal S5, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1671_114103-116776' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1671_150774-153400' ' no hits & (original description: Putative glysoja_048546, Description = F7F22.17, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1673_300680-312049' '(at5g40740 : 813.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1626.0) & (original description: Putative 38930, Description = AUGMIN subunit 6, PFAM = PF14661)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1676_11117-13461' ' no hits & (original description: Putative PGSC0003DMG400003884, Description = , PFAM = PF02519)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1676_372535-377262' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1688_123643-167757' '(at5g06350 : 536.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G27010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37360 : 218.0) no description available & (reliability: 1072.0) & (original description: Putative , Description = , PFAM = PF12333)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1692_84210-96312' '(at1g77122 : 258.0) Uncharacterised protein family UPF0090; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0090 (InterPro:IPR003728); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family UPF0090 (TAIR:AT1G69210.1); Has 3296 Blast hits to 1357 proteins in 179 species: Archae - 2; Bacteria - 148; Metazoa - 1652; Fungi - 253; Plants - 200; Viruses - 109; Other Eukaryotes - 932 (source: NCBI BLink). & (reliability: 516.0) & (original description: Putative MTR_3g090140, Description = DUF150 family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1703_379868-394806' '(at1g02960 : 106.0) unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02965.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1716_46490-49182' '(at3g24255 : 104.0) RNA-directed DNA polymerase (reverse transcriptase)-related family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23910.1); Has 169 Blast hits to 169 proteins in 55 species: Archae - 8; Bacteria - 18; Metazoa - 36; Fungi - 11; Plants - 53; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1718_219213-223290' '(at3g21700 : 266.0) Monomeric G protein. Expressed in root epidermal cells that are destined to become atrichoblasts. Also expressed during pollen development and in the pollen tube tip.; SGP2; FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Mitochondrial Rho-like (InterPro:IPR013684), GTPase, Tem1 (InterPro:IPR017231); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT5G54840.1); Has 12242 Blast hits to 12235 proteins in 404 species: Archae - 2; Bacteria - 22; Metazoa - 5958; Fungi - 1374; Plants - 1920; Viruses - 3; Other Eukaryotes - 2963 (source: NCBI BLink). & (gnl|cdd|36886 : 260.0) no description available & (gnl|cdd|58011 : 237.0) no description available & (reliability: 532.0) & (original description: Putative sgp1, Description = Septum-promoting GTP-binding protein 1, PFAM = PF00071)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1733_175638-181418' '(at1g69980 : 153.0) unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30 Blast hits to 30 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative At1g69980, Description = At1g69980, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1734_180592-193671' ' no hits & (original description: Putative , Description = , PFAM = PF12231)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1735_248347-385103' ' no hits & (original description: Putative pit1, Description = Pit1 protein, PFAM = PF00304)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1741_266866-281323' '(at3g21400 : 168.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative At3g21400, Description = Putative uncharacterized protein At3g21400, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1741_381887-411079' '(at3g03280 : 85.1) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17350.1); Has 137 Blast hits to 137 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative PGSC0003DMG400030630, Description = Multidrug and toxic compound extrusion protein, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1747_148000-152813' '(at3g15351 : 145.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 43 Blast hits to 43 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative At3g15351, Description = AT3G15351 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1751_12964-115398' '(at3g58010 : 298.0) plastoglobulin 34kD (PGL34); FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: Plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT2G42130.4); Has 158 Blast hits to 158 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 6; Plants - 145; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 596.0) & (original description: Putative PAP13, Description = Probable plastid-lipid-associated protein 13, chloroplastic, PFAM = PF04755)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1756_354903-378459' '(at3g01160 : 353.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUC153 (InterPro:IPR012580); Has 36638 Blast hits to 21323 proteins in 1057 species: Archae - 109; Bacteria - 2369; Metazoa - 13796; Fungi - 4858; Plants - 1657; Viruses - 489; Other Eukaryotes - 13360 (source: NCBI BLink). & (gnl|cdd|37529 : 305.0) no description available & (gnl|cdd|35197 : 195.0) no description available & (reliability: 706.0) & (original description: Putative ESF1, Description = Pre-rRNA-processing esf1-like protein, PFAM = PF08159)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1758_137042-156780' '(at3g50780 : 548.0) BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G63850.1); Has 298 Blast hits to 298 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 287; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 1096.0) & (original description: Putative At3g50780, Description = BTB/POZ domain-containing protein At3g50780, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1760_285756-296313' '(at1g47640 : 364.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2053, membrane (InterPro:IPR019164); Has 204 Blast hits to 204 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|38446 : 265.0) no description available & (reliability: 728.0) & (original description: Putative PGSC0003DMG400015450, Description = At1g47640/F16N3_6, PFAM = PF09767)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1763_88981-92861' '(at2g30990 : 174.0) Protein of unknown function (DUF688); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF688) (TAIR:AT1G29240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68662 : 92.6) no description available & (reliability: 348.0) & (original description: Putative , Description = Transcription initiation factor TFIID subunit 11, putative, PFAM = PF05097)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1765_366958-369281' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Putative reverse transcriptase, identical, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1773_248487-251743' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1774_203967-240950' '(at4g27010 : 640.0) INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72270.1); Has 312 Blast hits to 226 proteins in 103 species: Archae - 0; Bacteria - 2; Metazoa - 129; Fungi - 90; Plants - 83; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|37002 : 207.0) no description available & (reliability: 1280.0) & (original description: Putative , Description = Phospho-2-dehydro-3-deoxyheptonate aldolase, PFAM = PF11707;PF16201)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1774_204727-216029' '(at4g27010 : 436.0) INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72270.1); Has 312 Blast hits to 226 proteins in 103 species: Archae - 0; Bacteria - 2; Metazoa - 129; Fungi - 90; Plants - 83; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|37002 : 90.4) no description available & (reliability: 872.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1781_220758-225801' '(gnl|cdd|70188 : 175.0) no description available & (at4g36660 : 151.0) Protein of unknown function (DUF1195); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1195 (InterPro:IPR010608); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1195) (TAIR:AT5G65650.1); Has 67 Blast hits to 67 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative PGSC0003DMG400005160, Description = Sugar transporter, putative, PFAM = PF06708)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1793_156130-158760' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1795_23497-35470' '(at2g30700 : 529.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G61900.1); Has 68 Blast hits to 67 proteins in 13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1058.0) & (original description: Putative At1g61900, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1795_349188-370079' '(at1g05960 : 507.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Uncharacterized protein (TAIR:AT2G41830.1); Has 335 Blast hits to 327 proteins in 101 species: Archae - 0; Bacteria - 6; Metazoa - 143; Fungi - 47; Plants - 128; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37088 : 179.0) no description available & (reliability: 1014.0) & (original description: Putative umc2615, Description = Protein EFR3 isogeny, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1800_139633-160217' '(at1g36050 : 660.0) Endoplasmic reticulum vesicle transporter protein; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1692 (InterPro:IPR012936); BEST Arabidopsis thaliana protein match is: Endoplasmic reticulum vesicle transporter protein (TAIR:AT1G22200.1); Has 1261 Blast hits to 1092 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 439; Fungi - 275; Plants - 277; Viruses - 0; Other Eukaryotes - 270 (source: NCBI BLink). & (gnl|cdd|37878 : 455.0) no description available & (gnl|cdd|87414 : 277.0) no description available & (reliability: 1320.0) & (original description: Putative ergic3, Description = Endoplasmic reticulum-Golgi intermediate compartment protein 3, PFAM = PF07970;PF13850)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1803_205005-216747' '(at5g41950 : 608.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: protein import into mitochondrial outer membrane; LOCATED IN: mitochondrial outer membrane translocase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Plant specific mitochondrial import receptor subunit TOM20 (InterPro:IPR010547); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1216.0) & (original description: Putative BnaUnng00170D, Description = BnaUnng00170D protein, PFAM = PF06552)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1821_14754-27303' '(at2g47390 : 739.0) Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106); BEST Arabidopsis thaliana protein match is: acylaminoacyl-peptidase-related (TAIR:AT4G14570.1); Has 4880 Blast hits to 4877 proteins in 846 species: Archae - 179; Bacteria - 3027; Metazoa - 477; Fungi - 49; Plants - 145; Viruses - 0; Other Eukaryotes - 1003 (source: NCBI BLink). & (gnl|cdd|37311 : 276.0) no description available & (gnl|cdd|31695 : 159.0) no description available & (reliability: 1478.0) & (original description: Putative yuxL, Description = Aminoacyl peptidase, PFAM = PF00326)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1827_19687-22112' ' (original description: Putative orf333, Description = H0807C06-H0308C08.6 protein, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1843_329381-331915' ' no hits & (original description: Putative , Description = , PFAM = PF06839)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1845_84637-95083' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1864_112024-117423' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1870_340919-363198' '(at2g47980 : 1185.0) Essential to the monopolar orientation of the kinetochores during meiosis.; sister-chromatid cohesion protein 3 (SCC3); FUNCTIONS IN: binding; INVOLVED IN: mitosis, attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation, meiotic sister chromatid cohesion, centromeric; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), STAG (InterPro:IPR013721), Stromalin conservative domain (InterPro:IPR020839); Has 568 Blast hits to 559 proteins in 184 species: Archae - 0; Bacteria - 2; Metazoa - 324; Fungi - 134; Plants - 52; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|37222 : 506.0) no description available & (gnl|cdd|71942 : 135.0) no description available & (reliability: 2370.0) & (original description: Putative SCC3, Description = Sister-chromatid cohesion protein 3, PFAM = PF08514)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1870_377263-380444' '(at5g19970 : 308.0) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 616.0) & (original description: Putative Sb03g029480, Description = Putative uncharacterized protein Sb03g029480, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1873_64778-67128' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1876_365975-368462' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1877_225019-257651' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1883_212890-223958' '(at5g19950 : 271.0) CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1767 (InterPro:IPR013894); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF1767) (TAIR:AT5G63540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 542.0) & (original description: Putative At5g19950, Description = AT5G19950 protein, PFAM = PF08585)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1887_8670-12408' ' (original description: Putative , Description = , PFAM = PF05056)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1887_113768-121877' '(at2g38025 : 255.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT3G57810.1); Has 173 Blast hits to 173 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 2; Plants - 136; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 510.0) & (original description: Putative LOC_Os03g15930, Description = OTU-like cysteine protease family protein, expressed, PFAM = PF02338)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1912_131115-134096' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1914_376032-378706' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1916_142976-152203' '(at5g13390 : 619.0) Required for normal pollen development and lipid accumulation within the tapetum; NO EXINE FORMATION 1 (NEF1); LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1238.0) & (original description: Putative orf265a, Description = Orf265a protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1920_319189-321686' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1920_468526-473074' ' no hits & (original description: Putative PGSC0003DMG400001291, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1921_47985-53605' '(at5g64470 : 549.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 13 (TAIR:AT2G14530.1). & (gnl|cdd|72785 : 104.0) no description available & (reliability: 1098.0) & (original description: Putative TBL12, Description = Protein trichome birefringence-like 12, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1921_48207-52697' '(at5g64470 : 171.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 13 (TAIR:AT2G14530.1). & (reliability: 342.0) & (original description: Putative TBL12, Description = Gb:AAD15463.1 isoform 1, PFAM = PF13839;PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1922_48870-89441' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1922_88420-98093' '(at4g13030 : 246.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative At4g13030, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1928_36840-39232' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1930_133663-136241' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1931_46643-49821' ' no hits & (original description: Putative , Description = , PFAM = PF04525)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1931_364282-370000' '(at3g51620 : 364.0) PAP/OAS1 substrate-binding domain superfamily; BEST Arabidopsis thaliana protein match is: nucleotidyltransferases (TAIR:AT3G61690.1); Has 386 Blast hits to 356 proteins in 104 species: Archae - 0; Bacteria - 4; Metazoa - 102; Fungi - 40; Plants - 181; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|37117 : 179.0) no description available & (reliability: 728.0) & (original description: Putative pco079591, Description = Nucleotidyltransferase domain containing protein, expressed, PFAM = PF01909)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1938_265103-271735' '(at2g35880 : 118.0) TPX2 (targeting protein for Xklp2) protein family; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT4G32330.3); Has 16554 Blast hits to 10282 proteins in 807 species: Archae - 18; Bacteria - 1410; Metazoa - 6904; Fungi - 1967; Plants - 895; Viruses - 63; Other Eukaryotes - 5297 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative F4I4, Description = TPX2, C-terminal domain-containing protein, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1947_20241-23293' '(at4g22190 : 157.0) unknown protein; Has 283 Blast hits to 154 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 24; Fungi - 12; Plants - 48; Viruses - 0; Other Eukaryotes - 197 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative , Description = Serine/arginine repetitive matrix protein 2, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1947_47980-51812' ' no hits & (original description: Putative , Description = , PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1956_214591-229498' '(at4g29790 : 675.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits to 357 proteins in 124 species: Archae - 0; Bacteria - 74; Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other Eukaryotes - 190 (source: NCBI BLink). & (reliability: 1350.0) & (original description: Putative F383_14574, Description = Twist-related 1, PFAM = PF10198)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1957_99530-107900' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1957_302325-305233' '(at1g62730 : 431.0) Terpenoid synthases superfamily protein; FUNCTIONS IN: transferase activity; INVOLVED IN: biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Terpenoid synthase (InterPro:IPR008949), Squalene/phytoene synthase (InterPro:IPR002060); Has 1013 Blast hits to 1013 proteins in 466 species: Archae - 0; Bacteria - 638; Metazoa - 104; Fungi - 106; Plants - 45; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|39612 : 328.0) no description available & (gnl|cdd|31750 : 105.0) no description available & (reliability: 862.0) & (original description: Putative At1g62730, Description = At1g62730, PFAM = PF00494)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1959_142646-147418' ' no hits & (original description: Putative PGSC0003DMG400030371, Description = , PFAM = PF00170)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1965_280851-284832' ' no hits & (original description: Putative EN60, Description = AtbHLH68, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1966_74272-362057' ' no hits & (original description: Putative PGSC0003DMG400024660, Description = , PFAM = PF12874;PF12874;PF12874)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1966_372639-378355' ' no hits & (original description: Putative , Description = , PFAM = PF05904;PF05904)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1970_103423-113092' '(at2g46000 : 94.4) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mesoderm development candidate 2 (InterPro:IPR019330); Has 31 Blast hits to 31 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative PGSC0003DMG400006503, Description = LDLR chaperone MESD, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1986_54427-72325' '(at4g26550 : 282.0) Got1/Sft2-like vescicle transport protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Got1/SFT2-like (InterPro:IPR007305), Vesicle transport protein, SFT2-like (InterPro:IPR011691); BEST Arabidopsis thaliana protein match is: Got1/Sft2-like vescicle transport protein family (TAIR:AT5G56020.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38098 : 154.0) no description available & (gnl|cdd|71211 : 98.3) no description available & (reliability: 564.0) & (original description: Putative At4g26550, Description = At4g26550, PFAM = PF04178)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1987_359796-363044' '(at5g04460 : 130.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Ring/U-Box superfamily protein (TAIR:AT2G27950.1). & (reliability: 260.0) & (original description: Putative TRIUR3_01850, Description = Protein neuralized, PFAM = PF13920)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1990_389686-392552' ' no hits & (original description: Putative , Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold1995_151374-169873' '(at3g19190 : 1187.0) Encodes autophagy-related 2 (ATG2).; AUTOPHAGY 2 (ATG2); CONTAINS InterPro DOMAIN/s: autophagy-related, C-terminal (InterPro:IPR015412); Has 828 Blast hits to 713 proteins in 221 species: Archae - 0; Bacteria - 44; Metazoa - 384; Fungi - 228; Plants - 88; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (gnl|cdd|38204 : 412.0) no description available & (gnl|cdd|72748 : 111.0) no description available & (reliability: 2374.0) & (original description: Putative ATG2, Description = Autophagy-related protein 2, PFAM = PF09333;PF12624;PF13329)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2000_45575-97734' '(at5g58510 : 1062.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55060.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37601 : 191.0) no description available & (reliability: 2124.0) & (original description: Putative At5g58510, Description = Putative uncharacterized protein At5g58510, PFAM = PF13890)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2012_243214-245603' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2022_349724-352391' ' (original description: Putative BA1, Description = Putative Ty-1 copia retrotransposon, PFAM = PF13976)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2028_350532-356057' '(at5g14310 : 587.0) carboxyesterase 16 (CXE16); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36728 : 262.0) no description available & (gnl|cdd|87389 : 178.0) no description available & (q6l545|gid1_orysa : 114.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 1174.0) & (original description: Putative CXE16, Description = Probable carboxylesterase 16, PFAM = PF07859)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2030_45202-47537' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2052_289959-294333' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2058_55278-58000' ' no hits & (original description: Putative Sb08g020705, Description = Retrotransposon protein, putative, Ty1-copia subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2068_206919-209392' ' no hits & (original description: Putative HM01045, Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2079_348300-351131' '(at1g76240 : 191.0) Arabidopsis protein of unknown function (DUF241); FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT2G17080.1); Has 409 Blast hits to 404 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 404; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|66742 : 101.0) no description available & (reliability: 382.0) & (original description: Putative , Description = , PFAM = PF03087)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2090_307179-316848' '(at1g04900 : 547.0) Protein of unknown function (DUF185); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF185 (InterPro:IPR003788); Has 316 Blast hits to 314 proteins in 164 species: Archae - 0; Bacteria - 117; Metazoa - 2; Fungi - 113; Plants - 44; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|86057 : 136.0) no description available & (reliability: 1094.0) & (original description: Putative MTR_2g031240, Description = S-adenosyl-L-methionine-dependent methyltransferase, putative, PFAM = PF02636)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2091_190498-193273' '(at3g61280 : 123.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF821) (TAIR:AT3G61290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69222 : 123.0) no description available & (gnl|cdd|37669 : 117.0) no description available & (reliability: 246.0) & (original description: Putative AT1G63420, Description = Glycosyltransferase family 90 protein, PFAM = PF05686)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2097_38841-42199' '(at5g47900 : 517.0) Protein of unknown function (DUF1624); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1624 (InterPro:IPR012429); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1624) (TAIR:AT5G27730.1). & (gnl|cdd|39881 : 388.0) no description available & (gnl|cdd|34021 : 126.0) no description available & (reliability: 1034.0) & (original description: Putative Sb06g015200, Description = Putative uncharacterized protein Sb06g015200, PFAM = PF07786)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2110_270335-276156' '(at2g39650 : 235.0) Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT2G38820.2); Has 395 Blast hits to 393 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 393; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68298 : 176.0) no description available & (reliability: 470.0) & (original description: Putative , Description = , PFAM = PF04720)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2110_498515-499967' ' no hits & (original description: Putative orf143, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2112_91268-98391' '(at3g54750 : 146.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages. & (reliability: 292.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2113_298394-301175' ' (original description: Putative TnInt1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2114_188004-193390' '(at1g28530 : 318.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; Has 20 Blast hits to 20 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative At1g28530, Description = Elongation factor P-like protein, putative isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2116_256478-259320' ' (original description: Putative CRF1, Description = Ethylene-responsive transcription factor RAP2-11, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2117_297132-303970' '(at1g09280 : 587.0) CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits to 5912 proteins in 1592 species: Archae - 0; Bacteria - 2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses - 0; Other Eukaryotes - 2186 (source: NCBI BLink). & (gnl|cdd|37762 : 192.0) no description available & (gnl|cdd|80545 : 153.0) no description available & (reliability: 1174.0) & (original description: Putative TSTD2, Description = Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2, PFAM = PF12368;PF03959)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2125_41339-43892' ' no hits & (original description: Putative , Description = , PFAM = PF05703)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2132_420744-424453' '(at3g44510 : 344.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, root; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G08310.1). & (reliability: 688.0) & (original description: Putative At3g44510, Description = Alpha/beta-hydrolases family protein, PFAM = PF12697)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2134_151882-191107' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2156_138733-148683' '(at5g51180 : 497.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G25770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39573 : 297.0) no description available & (gnl|cdd|68625 : 227.0) no description available & (reliability: 994.0) & (original description: Putative At5g51180, Description = AT5G51180 protein, PFAM = PF05057)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2158_219610-222143' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2172_189723-207350' '(at3g51650 : 501.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51640.1); Has 27645 Blast hits to 15097 proteins in 1246 species: Archae - 44; Bacteria - 3367; Metazoa - 10036; Fungi - 2690; Plants - 1205; Viruses - 196; Other Eukaryotes - 10107 (source: NCBI BLink). & (reliability: 1002.0) & (original description: Putative BnaA09g32170D, Description = BnaA09g32170D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2186_100515-103081' '(at3g12345 : 131.0) unknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative At3g12345, Description = FKBP-type peptidyl-prolyl cis-trans isomerase, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2197_64891-75250' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2202_77708-139917' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2220_83253-87415' '(at5g13100 : 427.0) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 854.0) & (original description: Putative , Description = Glucose-6-phosphate 1-dehydrogenase, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2223_127381-140524' '(at3g59300 : 404.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G24060.1); Has 75 Blast hits to 73 proteins in 16 species: Archae - 0; Bacteria - 6; Metazoa - 1; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 808.0) & (original description: Putative BnaA09g37670D, Description = BnaA09g37670D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2223_127682-140604' '(at3g59300 : 418.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G24060.1); Has 75 Blast hits to 73 proteins in 16 species: Archae - 0; Bacteria - 6; Metazoa - 1; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 836.0) & (original description: Putative BnaA09g37670D, Description = BnaA09g37670D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2232_163339-172297' '(at4g22860 : 137.0) Cell cycle regulated microtubule associated protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Cell cycle regulated microtubule associated protein (InterPro:IPR022021); BEST Arabidopsis thaliana protein match is: Cell cycle regulated microtubule associated protein (TAIR:AT4G11990.1); Has 104 Blast hits to 96 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 3; Plants - 81; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative PGSC0003DMG400031013, Description = , PFAM = PF12214)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2236_36500-40738' '(at2g29670 : 443.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G07280.3); Has 535 Blast hits to 340 proteins in 62 species: Archae - 10; Bacteria - 119; Metazoa - 2; Fungi - 0; Plants - 351; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 886.0) & (original description: Putative At2g29670, Description = Putative uncharacterized protein At2g29670, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2244_117287-121935' '(at2g02590 : 284.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Putative small multi-drug export (InterPro:IPR009577); Has 405 Blast hits to 405 proteins in 185 species: Archae - 65; Bacteria - 295; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|70176 : 132.0) no description available & (reliability: 568.0) & (original description: Putative BnaA09g19100D, Description = BnaA09g19100D protein, PFAM = PF06695)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2248_122179-127620' ' no hits & (original description: Putative PGSC0003DMG400024664, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2255_164484-167170' '(at5g38300 : 92.4) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67035.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2282_284250-294078' '(at1g03290 : 241.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02880.2). & (reliability: 482.0) & (original description: Putative At1g03290, Description = Os10g0315400 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2283_209249-213104' ' (original description: Putative ap2, Description = Ethylene-responsive transcription factor, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2289_325665-328830' ' no hits & (original description: Putative str246N, Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, PFAM = PF00665)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2293_19490-22692' ' (original description: Putative NECAME_09491, Description = Reverse transcriptase, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2293_124170-126544' ' no hits & (original description: Putative PGSC0003DMG400045123, Description = Zinc finger containing preotein, putative, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2298_298828-311448' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2310_34042-49559' ' no hits & (original description: Putative , Description = , PFAM = PF08646)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2319_239914-243768' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2320_33618-45352' '(at2g31580 : 584.0) tRNAHis guanylyltransferase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: tRNAHis guanylyltransferase (InterPro:IPR007537); BEST Arabidopsis thaliana protein match is: tRNAHis guanylyltransferase (TAIR:AT2G32320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37932 : 308.0) no description available & (gnl|cdd|68035 : 244.0) no description available & (reliability: 1168.0) & (original description: Putative thg1, Description = tRNA(His) guanylyltransferase, PFAM = PF04446;PF04446;PF14413;PF14413)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2337_196511-198867' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Putative reverse transcriptase family member, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2339_222916-232150' '(at1g15780 : 149.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative MED15A, Description = Coactivator CBP, KIX domain-containing protein, PFAM = PF16987)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2343_155363-158172' '(at1g70420 : 117.0) Protein of unknown function (DUF1645); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT1G23710.1); Has 179 Blast hits to 179 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 162; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|71256 : 99.0) no description available & (reliability: 234.0) & (original description: Putative At1g70420, Description = At1g70420/F17O7_4, PFAM = PF07816)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2349_239117-249354' '(at5g01510 : 480.0) ROOT UV-B SENSITIVE 5 (RUS5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT3G45890.1); Has 426 Blast hits to 424 proteins in 125 species: Archae - 0; Bacteria - 2; Metazoa - 111; Fungi - 69; Plants - 183; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|68458 : 331.0) no description available & (gnl|cdd|39450 : 303.0) no description available & (reliability: 960.0) & (original description: Putative Sb03g006560, Description = Putative uncharacterized protein Sb03g006560, PFAM = PF04884)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2354_236619-247234' '(at4g24090 : 251.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 144 Blast hits to 142 proteins in 73 species: Archae - 3; Bacteria - 62; Metazoa - 7; Fungi - 13; Plants - 44; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 502.0) & (original description: Putative At4g24090, Description = At4g24090, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2357_9905-13002' ' no hits & (original description: Putative At5g07820, Description = Calmodulin-binding protein-like protein, PFAM = PF07839)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2357_322555-324497' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Retrovirus-related Pol polyprotein LINE-1, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2359_330304-335298' '(at5g09580 : 406.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53345.1); Has 53 Blast hits to 53 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 812.0) & (original description: Putative glysoja_034559, Description = Heat shock 70 kDa protein, mitochondrial, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2375_244741-249869' ' no hits & (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF08284)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2386_109932-132930' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2392_287463-295996' '(at3g30380 : 457.0) alpha/beta-Hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G01690.1); Has 4039 Blast hits to 4030 proteins in 818 species: Archae - 8; Bacteria - 1345; Metazoa - 714; Fungi - 203; Plants - 307; Viruses - 6; Other Eukaryotes - 1456 (source: NCBI BLink). & (gnl|cdd|36765 : 331.0) no description available & (reliability: 914.0) & (original description: Putative abhd17c, Description = Protein ABHD17C, PFAM = PF12146)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2393_190489-193571' ' no hits & (original description: Putative PGSC0003DMG400007860, Description = , PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2402_51434-54268' ' no hits & (original description: Putative , Description = , PFAM = PF00098;PF03732)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2402_51518-54270' ' no hits & (original description: Putative , Description = , PFAM = PF00098)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2402_51554-54123' ' no hits & (original description: Putative , Description = , PFAM = PF00098)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2411_17905-40924' '(at1g59520 : 444.0) Encodes CW7.; CW7; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2045 (InterPro:IPR019141); Has 145 Blast hits to 144 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 91; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|37676 : 345.0) no description available & (reliability: 888.0) & (original description: Putative T4M14.9, Description = Putative uncharacterized protein T4M14.9, PFAM = PF09741)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2412_38212-42829' '(at4g11090 : 483.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 23 (TBL23); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 24 (TAIR:AT4G23790.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|72785 : 155.0) no description available & (reliability: 966.0) & (original description: Putative TBL23, Description = Protein trichome birefringence-like 23, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2418_218498-226330' '(at4g15563 : 144.0) unknown protein; Has 36 Blast hits to 36 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative PGSC0003DMG400022660, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2426_108538-113290' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2428_631-7402' ' no hits & (original description: Putative GA7ox1, Description = Flavonol synthase/flavanone 3-hydroxylase, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2437_290355-293178' ' no hits & (original description: Putative PGSC0003DMG400024916, Description = , PFAM = PF00319)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2441_1431-22724' '(at5g15680 : 3612.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37036 : 1853.0) no description available & (reliability: 7224.0) & (original description: Putative At5g15680, Description = Cell morphogenesis related protein, PFAM = PF14225;PF14228;PF14222)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2441_177595-179975' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2445_112506-114826' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2457_129113-131541' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2460_213012-239544' '(at2g46915 : 588.0) Protein of unknown function (DUF3754); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3754 (InterPro:IPR022227); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3754) (TAIR:AT3G19340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1176.0) & (original description: Putative At2g46915, Description = At2g46910/F14M4.26, PFAM = PF12576)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2464_251029-256129' '(at5g39890 : 292.0) Protein of unknown function (DUF1637); FUNCTIONS IN: cysteamine dioxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1637 (InterPro:IPR012864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1637) (TAIR:AT5G15120.1); Has 361 Blast hits to 361 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 102; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|71286 : 282.0) no description available & (gnl|cdd|39482 : 259.0) no description available & (reliability: 584.0) & (original description: Putative PCO2, Description = Plant cysteine oxidase 2, PFAM = PF07847)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2474_212311-224823' '(at1g24310 : 375.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; Has 2922 Blast hits to 2454 proteins in 263 species: Archae - 0; Bacteria - 57; Metazoa - 1043; Fungi - 654; Plants - 388; Viruses - 11; Other Eukaryotes - 769 (source: NCBI BLink). & (gnl|cdd|38301 : 220.0) no description available & (reliability: 750.0) & (original description: Putative NUP54, Description = Nuclear pore complex protein NUP54, PFAM = PF13874)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2476_220661-223502' ' no hits & (original description: Putative HRGP-3, Description = Hydroxyproline-rich glycoprotein-3, PFAM = PF04554;PF04554;PF04554)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2479_317474-319682' '(at4g18690 : 148.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18680.1); Has 522 Blast hits to 522 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 513; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative PGSC0003DMG400028482, Description = Delay of germination 1, putative, PFAM = PF14144)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2483_256551-258985' ' no hits & (original description: Putative PGSC0003DMG400025060, Description = , PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2483_256557-258940' ' no hits & (original description: Putative PGSC0003DMG400025060, Description = , PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2490_180935-184619' '(gnl|cdd|69095 : 198.0) no description available & (at1g61260 : 126.0) Protein of unknown function (DUF761); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF761) (TAIR:AT1G11220.1); Has 110 Blast hits to 108 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 108; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative CFE1, Description = Cotton fiber expressed protein 1, PFAM = PF05553;PF14364)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2498_50680-53039' ' no hits & (original description: Putative HM01045, Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2505_149492-152340' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2506_310661-313782' ' (original description: Putative bd1, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2520_312889-326858' ' no hits & (original description: Putative RFC2, Description = Replication factor C subunit 2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2527_202976-211797' '(at1g15860 : 306.0) INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12760.1). & (gnl|cdd|38287 : 138.0) no description available & (gnl|cdd|86365 : 116.0) no description available & (reliability: 612.0) & (original description: Putative At1g15860, Description = Defective in cullin neddylation protein, PFAM = PF03556)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2536_281367-287953' '(at3g52240 : 103.0) unknown protein; Has 220 Blast hits to 193 proteins in 66 species: Archae - 0; Bacteria - 15; Metazoa - 53; Fungi - 33; Plants - 66; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative PGSC0003DMG400023487, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2540_241795-245790' ' no hits & (original description: Putative PGSC0003DMG400035713, Description = Putative ovule protein, PFAM = PF14111)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2579_185128-210756' '(at3g17030 : 686.0) Nucleic acid-binding proteins superfamily; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027); Has 37 Blast hits to 37 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 1372.0) & (original description: Putative , Description = , PFAM = PF17245;PF17246;PF17244)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2582_90650-96150' ' no hits & (original description: Putative pspC, Description = Periaxin, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2594_94398-97309' ' no hits & (original description: Putative NAC1, Description = NAC transcription factor, PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2609_103293-106280' '(at5g10310 : 95.5) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 191.0) & (original description: Putative BnaA02g00460D, Description = BnaA02g00460D protein, PFAM = PF17181)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2615_215045-222421' '(at1g50910 : 190.0) unknown protein; Has 1105 Blast hits to 802 proteins in 217 species: Archae - 2; Bacteria - 177; Metazoa - 445; Fungi - 210; Plants - 58; Viruses - 6; Other Eukaryotes - 207 (source: NCBI BLink). & (reliability: 380.0) & (original description: Putative At1g50910, Description = BnaC05g26990D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2617_78423-315804' '(at4g02370 : 156.0) Protein of unknown function, DUF538; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT1G02816.1); Has 618 Blast hits to 617 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 617; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|86647 : 123.0) no description available & (reliability: 312.0) & (original description: Putative BnaC03g30980D, Description = BnaC03g30980D protein, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2619_143868-214734' '(at5g26760 : 249.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF408 (InterPro:IPR007308); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86568 : 112.0) no description available & (reliability: 498.0) & (original description: Putative At5g26760, Description = RNA polymerase II-associated protein 2 homolog, PFAM = PF04181)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2627_16515-21508' '(at2g40435 : 110.0) BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative BnaC06g42410D, Description = BnaC06g42410D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2633_44822-48315' ' no hits & (original description: Putative PGSC0003DMG400004801, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2634_3156-197503' ' (original description: Putative RT, Description = Reverse transcriptase, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2634_12210-16048' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2634_233417-240976' '(at3g02420 : 363.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0121 (InterPro:IPR005344); Has 72 Blast hits to 71 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 60; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 726.0) & (original description: Putative At3g02420, Description = AT3g02420/F16B3_5, PFAM = PF03661)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2641_195107-198126' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2651_19812-38603' '(at5g35180 : 588.0) FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769), Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: ENHANCED DISEASE RESISTANCE 2 (TAIR:AT4G19040.1); Has 454 Blast hits to 426 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 378; Viruses - 2; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|70520 : 210.0) no description available & (reliability: 1176.0) & (original description: Putative LOC100502200, Description = Pleckstrin-like (PH) and lipid-binding START domain protein, PFAM = PF07059;PF01852)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2673_259379-262243' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2673_282047-284797' ' (original description: Putative rTeg1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF07727)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2689_49179-71908' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2690_43687-92771' ' no hits & (original description: Putative PGSC0003DMG401027957, Description = , PFAM = PF12214)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2695_155775-167148' '(at1g10417 : 165.0) Encodes protein with unknown function whose expression is repressed by inoculation with Agrobacterium tumerifaciens.; unknown protein; Has 26006 Blast hits to 16906 proteins in 1326 species: Archae - 433; Bacteria - 3134; Metazoa - 12646; Fungi - 2033; Plants - 1219; Viruses - 58; Other Eukaryotes - 6483 (source: NCBI BLink). & (reliability: 330.0) & (original description: Putative TCM_010077, Description = Encodes protein with Uncharacterized protein function whose expression is repressed by inoculation with Agrobacterium tumerifaciens isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2699_181850-188265' '(at5g23200 : 474.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 948.0) & (original description: Putative PGSC0003DMG400021516, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2737_266417-269004' ' no hits & (original description: Putative PGSC0003DMG400006418, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2737_278898-287737' '(at5g49550 : 129.0) Putative homolog of mammalian BLOC-1 Subunit 2. Protein - protein interaction with BLOS1.; CONTAINS InterPro DOMAIN/s: Biogenesis of lysosome-related organelles complex-1, subunit 2 (InterPro:IPR019269); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative BLOS2, Description = Biogenesis of lysosome-related organelles complex 1 subunit 2, PFAM = PF10046)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2758_285297-288165' '(at1g16320 : 284.0) Uncharacterized conserved protein (DUF2358); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); BEST Arabidopsis thaliana protein match is: Uncharacterized conserved protein (DUF2358) (TAIR:AT1G79510.2); Has 274 Blast hits to 274 proteins in 79 species: Archae - 0; Bacteria - 78; Metazoa - 80; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 568.0) & (original description: Putative , Description = Wollemia nobilis Ref_Wollemi_Transcript_28887_1569 transcribed RNA sequence, PFAM = PF10184)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2759_94156-98272' '(at3g19540 : 683.0) Protein of unknown function (DUF620); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF620 (InterPro:IPR006873); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF620) (TAIR:AT1G49840.1); Has 219 Blast hits to 218 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 219; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68363 : 427.0) no description available & (reliability: 1366.0) & (original description: Putative At3g19540, Description = AT3g19540/T31J18_4, PFAM = PF04788)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2769_186562-190428' ' no hits & (original description: Putative At2g27730, Description = Uncharacterized protein At2g27730, mitochondrial, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2774_238607-278212' '(at3g12590 : 1353.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 50 Blast hits to 41 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 2706.0) & (original description: Putative F383_04478, Description = Integrin alpha-3, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2780_75159-78086' ' (original description: Putative glysoja_020404, Description = General transcription factor 3C-like protein, PFAM = PF13414)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2784_56956-65594' '(at3g52570 : 340.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: intracellular protein transport, GPI anchor metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: PGAP1-like (InterPro:IPR012908); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G10030.1); Has 2648 Blast hits to 2646 proteins in 970 species: Archae - 27; Bacteria - 1772; Metazoa - 182; Fungi - 164; Plants - 106; Viruses - 0; Other Eukaryotes - 397 (source: NCBI BLink). & (gnl|cdd|37593 : 154.0) no description available & (reliability: 680.0) & (original description: Putative TCM_022660, Description = Alpha/beta-Hydrolases superfamily protein isoform 2, PFAM = PF12697)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2785_62656-264873' ' no hits & (original description: Putative , Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2800_189001-191774' '(at4g16530 : 81.3) Family of unknown function (DUF577); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF577 (InterPro:IPR007598); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF577) (TAIR:AT5G37410.1); Has 736 Blast hits to 673 proteins in 194 species: Archae - 0; Bacteria - 81; Metazoa - 201; Fungi - 106; Plants - 128; Viruses - 0; Other Eukaryotes - 220 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative Sb01g017640, Description = Putative uncharacterized protein Sb01g017640, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2803_135868-150807' '(at5g63220 : 380.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0363 (InterPro:IPR007317); Has 304 Blast hits to 301 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 121; Plants - 35; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|38234 : 188.0) no description available & (gnl|cdd|67790 : 101.0) no description available & (reliability: 760.0) & (original description: Putative At5g63220, Description = At5g63220, PFAM = PF04190)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2803_193624-205172' ' (original description: Putative Sb01g026340, Description = Putative uncharacterized protein Sb01g026340, PFAM = PF01702)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2809_24197-26553' ' no hits & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2812_38610-145267' '(at5g59410 : 177.0) Rab5-interacting family protein; CONTAINS InterPro DOMAIN/s: Rab5-interacting (InterPro:IPR010742); BEST Arabidopsis thaliana protein match is: Rab5-interacting family protein (TAIR:AT2G29020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38625 : 136.0) no description available & (gnl|cdd|87202 : 134.0) no description available & (reliability: 354.0) & (original description: Putative At5g59410, Description = At5g59410, PFAM = PF07019)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2832_141098-145143' '(at2g33570 : 668.0) Domain of unknown function (DUF23); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF23) (TAIR:AT5G44670.1); Has 195 Blast hits to 195 proteins in 24 species: Archae - 2; Bacteria - 7; Metazoa - 43; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|85620 : 103.0) no description available & (gnl|cdd|39932 : 87.5) no description available & (reliability: 1336.0) & (original description: Putative GALS1, Description = Galactan beta-1,4-galactosyltransferase GALS1, PFAM = PF01697)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2834_164957-167388' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2849_293847-296603' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2858_5816-8753' ' no hits & (original description: Putative , Description = , PFAM = PF13952)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2861_133771-136313' ' no hits & (original description: Putative orf171a, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2868_158965-167081' '(at3g55600 : 211.0) Membrane fusion protein Use1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Use1 (InterPro:IPR019150); BEST Arabidopsis thaliana protein match is: Membrane fusion protein Use1 (TAIR:AT1G54110.1); Has 235 Blast hits to 235 proteins in 85 species: Archae - 1; Bacteria - 13; Metazoa - 90; Fungi - 42; Plants - 82; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative USE1, Description = Qc-SNARE, USE1-family, PFAM = PF09753)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2876_260020-262339' ' no hits & (original description: Putative , Description = , PFAM = PF00098)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2876_260026-262619' ' no hits & (original description: Putative , Description = , PFAM = PF00098)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2884_144170-152697' '(at5g44600 : 304.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G44590.1); Has 186 Blast hits to 186 proteins in 61 species: Archae - 4; Bacteria - 77; Metazoa - 2; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 608.0) & (original description: Putative MTR_2g062700, Description = S-adenosylmethionine-dependent methyltransferase, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2900_172879-175976' '(gnl|cdd|71235 : 156.0) no description available & (at3g44940 : 84.3) Protein of unknown function (DUF1635); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1635 (InterPro:IPR012862); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1635) (TAIR:AT5G22930.1); Has 118 Blast hits to 118 proteins in 26 species: Archae - 0; Bacteria - 2; Metazoa - 4; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative PGSC0003DMG400031075, Description = DUF1635 family protein, PFAM = PF07795)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2909_75976-78472' ' no hits & (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2913_224180-226857' '(at4g08330 : 119.0) unknown protein. & (reliability: 238.0) & (original description: Putative At4g08330, Description = Uncharacterized protein At4g08330, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2916_269319-271748' '(at5g19590 : 178.0) Protein of unknown function, DUF538; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT4G02360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86647 : 83.0) no description available & (reliability: 356.0) & (original description: Putative BnaC02g08860D, Description = BnaC02g08860D protein, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2922_141532-150704' ' no hits & (original description: Putative , Description = Tetratricopeptide repeat-like superfamily protein, PFAM = PF16669)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2929_116702-119517' '(at4g35690 : 127.0) Arabidopsis protein of unknown function (DUF241); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT4G35710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66742 : 123.0) no description available & (reliability: 254.0) & (original description: Putative PGSC0003DMG400001539, Description = DUF241 domain protein, PFAM = PF03087)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2930_30818-44294' '(at1g08390 : 143.0) unknown protein; Has 62 Blast hits to 62 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 34; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative , Description = , PFAM = PF16100)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2934_58819-61280' ' (original description: Putative Tgt1ORF2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2934_266358-269717' ' no hits & (original description: Putative , Description = , PFAM = PF08646)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2937_260206-262400' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2944_96881-99306' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2960_247752-250439' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2961_243298-247070' '(at1g71850 : 387.0) Ubiquitin carboxyl-terminal hydrolase family protein; CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant (InterPro:IPR021099); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein (TAIR:AT4G24320.1); Has 758 Blast hits to 736 proteins in 101 species: Archae - 0; Bacteria - 6; Metazoa - 59; Fungi - 84; Plants - 429; Viruses - 8; Other Eukaryotes - 172 (source: NCBI BLink). & (reliability: 774.0) & (original description: Putative PGSC0003DMG400021581, Description = Ubiquitin carboxyl-terminal hydrolase family protein, PFAM = PF11955)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2982_231029-233817' '(at5g42680 : 289.0) Protein of unknown function, DUF617; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF617, plant (InterPro:IPR006460); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF617 (TAIR:AT4G39610.1). & (gnl|cdd|68336 : 222.0) no description available & (reliability: 578.0) & (original description: Putative BnaA06g33470D, Description = BnaA06g33470D protein, PFAM = PF04759)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2984_42043-44534' ' no hits & (original description: Putative Os07g0686300, Description = Putative E3 ubiquitin-protein ligase Arkadia-like, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2986_141836-179366' '(at5g10730 : 153.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G15910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39489 : 133.0) no description available & (reliability: 306.0) & (original description: Putative At5g10730, Description = AT5g10730/MAJ23_90, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2988_251457-302931' '(at4g01290 : 188.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 1797 Blast hits to 1352 proteins in 216 species: Archae - 0; Bacteria - 202; Metazoa - 850; Fungi - 267; Plants - 109; Viruses - 0; Other Eukaryotes - 369 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2988_291526-295417' '(at2g46100 : 240.0) Nuclear transport factor 2 (NTF2) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); BEST Arabidopsis thaliana protein match is: Uncharacterized conserved protein (DUF2358) (TAIR:AT3G04890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 480.0) & (original description: Putative BnaC04g04760D, Description = BnaC04g04760D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold2999_196727-199262' '(at1g70780 : 120.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 143 Blast hits to 143 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative BnaC08g06180D, Description = BnaC08g06180D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3006_13928-19779' '(at1g73090 : 350.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages. & (reliability: 700.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3015_280672-284125' ' no hits & (original description: Putative , Description = PH01B031C15.25 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3018_14696-26456' '(at5g35430 : 605.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 227 Blast hits to 213 proteins in 75 species: Archae - 0; Bacteria - 6; Metazoa - 158; Fungi - 2; Plants - 36; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|37682 : 356.0) no description available & (reliability: 1210.0) & (original description: Putative F775_15993, Description = CCR4-NOT transcription complex subunit 10, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3019_247360-264271' ' no hits & (original description: Putative , Description = DNA/RNA polymerases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3024_181603-186700' '(at3g29180 : 399.0) Protein of unknown function (DUF1336); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT5G39430.1). & (gnl|cdd|70520 : 275.0) no description available & (reliability: 798.0) & (original description: Putative CW14, Description = AT3G29180 protein, PFAM = PF07059)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3025_1-2397' ' no hits & (original description: Putative PGSC0003DMG400015767, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3025_161006-163338' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3057_69989-79293' '(at5g22820 : 350.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024). & (reliability: 700.0) & (original description: Putative ARALYDRAFT_662088, Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3060_5928-8335' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3070_202563-205441' ' no hits & (original description: Putative glysoja_007451, Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3075_93586-111299' '(at4g30200 : 550.0) Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.; vernalization5/VIN3-like (VEL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vegetative to reproductive phase transition of meristem; LOCATED IN: PcG protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423, plant (InterPro:IPR004082), Fibronectin, type III-like fold (InterPro:IPR008957), Fibronectin, type III (InterPro:IPR003961); BEST Arabidopsis thaliana protein match is: Fibronectin type III domain-containing protein (TAIR:AT5G57380.1). & (reliability: 1100.0) & (original description: Putative VIL2, Description = VIN3-like protein 2, PFAM = PF07227)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3076_100419-105328' '(at1g12380 : 834.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62870.1); Has 173 Blast hits to 170 proteins in 34 species: Archae - 0; Bacteria - 4; Metazoa - 25; Fungi - 8; Plants - 123; Viruses - 7; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 1668.0) & (original description: Putative PGSC0003DMG400031021, Description = Ribonuclease H-like domain-containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3080_206301-209533' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3117_124031-126683' ' no hits & (original description: Putative , Description = Glutathione S-transferase, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3120_142013-150740' '(at3g23370 : 166.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative PGSC0003DMG400017215, Description = RNA recognition motif-containing protein, PFAM = PF00076)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3137_13140-15602' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3147_128656-131104' ' no hits & (original description: Putative PGSC0003DMG400025217, Description = DMRL synthase, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3150_54973-57461' ' no hits & (original description: Putative PGSC0003DMG402013972, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3161_167418-171943' '(at4g21215 : 85.1) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative PGSC0003DMG400002067, Description = BnaA03g58480D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3166_208680-217784' '(at4g12070 : 539.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1078.0) & (original description: Putative F16J13.140, Description = Putative uncharacterized protein At4g12070/F16J13_140, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3173_72386-79150' ' no hits & (original description: Putative PGSC0003DMG400006092, Description = Putative uncharacterized protein Sb01g005120, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3183_193217-205023' '(at5g47480 : 758.0) RGPR-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RGPR-related (TAIR:AT5G47490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37124 : 191.0) no description available & (reliability: 1516.0) & (original description: Putative PGSC0003DMG400012505, Description = Protein transport protein Sec16B, PFAM = PF12931;PF12931;PF12932)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3198_173669-193721' '(at5g08450 : 572.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR013951); Has 34444 Blast hits to 20801 proteins in 1175 species: Archae - 64; Bacteria - 2390; Metazoa - 15568; Fungi - 3729; Plants - 1886; Viruses - 208; Other Eukaryotes - 10599 (source: NCBI BLink). & (gnl|cdd|40040 : 208.0) no description available & (gnl|cdd|72067 : 95.5) no description available & (reliability: 1144.0) & (original description: Putative BnaC03g03600D, Description = BnaC03g03600D protein, PFAM = PF08642)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3201_7882-12851' '(at4g24200 : 149.0) Transcription elongation factor (TFIIS) family protein; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923); Has 1174 Blast hits to 562 proteins in 174 species: Archae - 0; Bacteria - 342; Metazoa - 163; Fungi - 176; Plants - 109; Viruses - 0; Other Eukaryotes - 384 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative PGSC0003DMG400029336, Description = BnaC07g38790D protein, PFAM = PF08711)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3202_54375-56707' ' no hits & (original description: Putative HM01045, Description = Putative reverse transcriptase family member, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3207_1-2786' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3208_248581-258809' '(at2g18220 : 674.0) Noc2p family; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0120 (InterPro:IPR005343); BEST Arabidopsis thaliana protein match is: Noc2p family (TAIR:AT3G55510.1); Has 4709 Blast hits to 3397 proteins in 331 species: Archae - 4; Bacteria - 179; Metazoa - 1693; Fungi - 681; Plants - 249; Viruses - 70; Other Eukaryotes - 1833 (source: NCBI BLink). & (q8lnu5|noc2l_orysa : 543.0) Nucleolar complex protein 2 homolog (Protein NOC2 homolog) - Oryza sativa (Rice) & (gnl|cdd|37467 : 496.0) no description available & (gnl|cdd|67337 : 294.0) no description available & (reliability: 1348.0) & (original description: Putative At2g18220, Description = Nucleolar complex protein 2 homolog, PFAM = PF03715)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3211_280521-283141' ' no hits & (original description: Putative Sb08g020705, Description = Retrotransposon protein, putative, Ty1-copia subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3212_152795-163729' ' no hits & (original description: Putative PGSC0003DMG401028427, Description = Rho termination factor, putative isoform 1, PFAM = PF07498)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3219_232641-235461' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3247_250541-261565' '(at2g28310 : 636.0) Protein of unknown function (DUF707); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G08040.2); Has 326 Blast hits to 325 proteins in 27 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 0; Plants - 305; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|68772 : 543.0) no description available & (reliability: 1272.0) & (original description: Putative At2g28310, Description = Putative uncharacterized protein At2g28310, PFAM = PF05212)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3251_232492-234980' '(at5g41810 : 105.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 514 Blast hits to 437 proteins in 98 species: Archae - 0; Bacteria - 21; Metazoa - 115; Fungi - 53; Plants - 52; Viruses - 5; Other Eukaryotes - 268 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative At5g41810, Description = BnaA07g15500D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3259_63634-66887' ' no hits & (original description: Putative PGSC0003DMG400014551, Description = Copper-binding periplasmic protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3266_48804-51709' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3282_191163-213361' ' (original description: Putative p2, Description = 60S acidic ribosomal protein P2, PFAM = PF00428)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3288_38912-261978' '(at5g08770 : 141.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3297_190710-246635' '(at4g39420 : 2966.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; Has 20 Blast hits to 19 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|37095 : 1151.0) no description available & (reliability: 5932.0) & (original description: Putative , Description = , PFAM = PF14649)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3299_215600-220336' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3301_256335-261330' ' (original description: Putative At4g08070, Description = Transposon protein, putative, CACTA, En/Spm sub-class, PFAM = PF02992;PF13960)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3307_180288-187698' '(at4g35240 : 498.0) Protein of unknown function (DUF630 and DUF632); EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT2G17110.1). & (gnl|cdd|68357 : 296.0) no description available & (reliability: 996.0) & (original description: Putative PGSC0003DMG400016824, Description = BZIP transcription factor bZIP107, PFAM = PF04782;PF04783)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3317_204273-213439' '(at4g31080 : 395.0) Protein of unknown function (DUF2296); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2296 (InterPro:IPR019273); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF2296) (TAIR:AT2G24330.1). & (gnl|cdd|38057 : 147.0) no description available & (reliability: 790.0) & (original description: Putative At2g24330, Description = Uncharacterized protein At2g24330, PFAM = PF10058)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3318_46862-54349' '(at1g12530 : 112.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56420.1); Has 54 Blast hits to 53 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative F383_13901, Description = Adenosine monophosphate-protein transferase and cysteine protease ibpA, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3328_143637-146634' ' no hits & (original description: Putative , Description = No apical meristem family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3330_20828-54114' ' (original description: Putative RT, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3342_61679-130646' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3348_147959-150690' ' no hits & (original description: Putative ZFP5, Description = Zinc finger protein 5, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3355_133817-137299' '(at5g24600 : 283.0) Protein of unknown function, DUF599; INVOLVED IN: biological_process unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF599 (InterPro:IPR006747); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF599 (TAIR:AT3G18215.1). & (gnl|cdd|68233 : 219.0) no description available & (reliability: 566.0) & (original description: Putative At5g24600, Description = At5g24600, PFAM = PF04654)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3356_121622-128636' ' no hits & (original description: Putative PED2, Description = Peroxisomal membrane protein PEX14, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3358_151212-154072' ' no hits & (original description: Putative RCOM_1719870, Description = Transcription factor, putative, PFAM = PF13837)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3360_130288-133367' ' no hits & (original description: Putative dhn1, Description = Dehydrin, PFAM = PF00257)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3366_238225-255882' '(at3g26115 : 459.0) Pyridoxal-5'-phosphate-dependent enzyme family protein; FUNCTIONS IN: pyridoxal phosphate binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: D-cysteine desulfhydrase (TAIR:AT1G48420.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|32585 : 114.0) no description available & (reliability: 918.0) & (original description: Putative At3g26115, Description = D-cysteine desulfhydrase 2, mitochondrial, PFAM = PF00291)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3371_212806-217678' '(at5g11640 : 215.0) Thioredoxin superfamily protein; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36132 : 181.0) no description available & (gnl|cdd|48511 : 141.0) no description available & (reliability: 430.0) & (original description: Putative BnaA10g20930D, Description = BnaA10g20930D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3372_150929-154584' '(at1g55340 : 152.0) Protein of unknown function (DUF1639); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1639 (InterPro:IPR012438); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1639) (TAIR:AT3G03880.1); Has 250 Blast hits to 247 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 250; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative F383_01731, Description = Aspartyl/glutamyl-tRNA (Asn/Gln) amidotransferase subunit B, PFAM = PF07797)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3388_254036-256413' ' no hits & (original description: Putative PGSC0003DMG401011138, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3396_132748-135818' ' no hits & (original description: Putative str246N, Description = Pol polyprotein, PFAM = PF13456;PF00665)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3396_167083-173995' '(at3g23740 : 115.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14120.1); Has 155 Blast hits to 130 proteins in 48 species: Archae - 0; Bacteria - 16; Metazoa - 19; Fungi - 48; Plants - 47; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative , Description = Uncharacterized protein isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3402_243103-246086' ' no hits & (original description: Putative PGSC0003DMG400031146, Description = , PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3402_243394-246092' ' no hits & (original description: Putative PGSC0003DMG400025060, Description = , PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3412_148370-151460' '(at1g68490 : 145.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3416_211040-213718' ' no hits & (original description: Putative PGSC0003DMG400022309, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3419_241710-247510' '(at2g27590 : 473.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Has 109 Blast hits to 109 proteins in 24 species: Archae - 0; Bacteria - 26; Metazoa - 0; Fungi - 2; Plants - 33; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 946.0) & (original description: Putative At2g27590, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3426_33774-36461' ' no hits & (original description: Putative LTI6A, Description = Hydrophobic protein LTI6A, PFAM = PF01679)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3435_57600-61156' ' no hits & (original description: Putative PGSC0003DMG400012643, Description = , PFAM = PF02362)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3439_154886-158382' ' no hits & (original description: Putative geg, Description = Gibberellin-regulated family protein, PFAM = PF02704)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3459_212068-250344' ' no hits & (original description: Putative , Description = Putative heterogeneous nuclear ribonucleoproteins A2/B1-like, PFAM = PF15502)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3460_46628-241608' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3461_170161-172511' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Putative reverse transcriptase family member, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3462_233641-247222' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3464_32793-35841' '(atmg00810 : 100.0) hypothetical protein; DNA/RNA polymerases superfamily protein; CONTAINS InterPro DOMAIN/s: Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (TAIR:AT4G23160.1). & (reliability: 200.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3464_77210-87009' ' no hits & (original description: Putative , Description = Tetratricopeptide repeat protein 37, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3478_183610-190846' '(gnl|cdd|70188 : 220.0) no description available & (at4g36660 : 199.0) Protein of unknown function (DUF1195); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1195 (InterPro:IPR010608); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1195) (TAIR:AT5G65650.1); Has 67 Blast hits to 67 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative At4g36660, Description = At4g36660, PFAM = PF06708)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3484_147346-150423' '(at1g78110 : 212.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22230.1); Has 5452 Blast hits to 3541 proteins in 289 species: Archae - 4; Bacteria - 165; Metazoa - 1756; Fungi - 532; Plants - 205; Viruses - 141; Other Eukaryotes - 2649 (source: NCBI BLink). & (reliability: 424.0) & (original description: Putative T11I11.5, Description = At1g78110, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3496_63965-66610' ' no hits & (original description: Putative , Description = Transposon protein, putative, CACTA, En/Spm sub-class, PFAM = PF13960)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3507_1042-25316' '(at2g38770 : 2300.0) EMBRYO DEFECTIVE 2765 (EMB2765); LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RNA helicase, putative (TAIR:AT5G47010.1); Has 4121 Blast hits to 3614 proteins in 689 species: Archae - 125; Bacteria - 655; Metazoa - 959; Fungi - 1056; Plants - 630; Viruses - 0; Other Eukaryotes - 696 (source: NCBI BLink). & (gnl|cdd|37017 : 1692.0) no description available & (gnl|cdd|31309 : 115.0) no description available & (reliability: 4600.0) & (original description: Putative AQR, Description = Intron-binding protein aquarius, PFAM = PF13087;PF16399;PF13086)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3507_128240-153408' '(at3g54500 : 239.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G64170.2). & (reliability: 478.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3525_124478-126840' ' no hits & (original description: Putative orf121b, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3536_145931-148422' ' no hits & (original description: Putative , Description = , PFAM = PF01693)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3552_77145-79792' '(at2g42760 : 94.7) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); Has 170 Blast hits to 164 proteins in 34 species: Archae - 0; Bacteria - 1; Metazoa - 26; Fungi - 10; Plants - 107; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative At2g42760, Description = At2g42760, PFAM = PF07939)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3561_135731-138319' ' no hits & (original description: Putative PGSC0003DMG400037159, Description = Putative disease resistance protein RGA2-like, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3564_11397-37512' '(at4g19350 : 84.0) embryo defective 3006 (EMB3006); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative PGSC0003DMG400029288, Description = Nnf1, PFAM = PF03980)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3570_22688-25618' ' no hits & (original description: Putative PGSC0003DMG400018146, Description = , PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3574_116402-225025' ' no hits & (original description: Putative PGSC0003DMG400014888, Description = Putative pol protein, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3580_206467-208799' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3583_212972-216091' ' no hits & (original description: Putative rTeg1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF07727)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3598_214543-242551' '(at5g51340 : 663.0) Tetratricopeptide repeat (TPR)-like superfamily protein; Has 214 Blast hits to 140 proteins in 56 species: Archae - 0; Bacteria - 4; Metazoa - 151; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|37511 : 327.0) no description available & (reliability: 1326.0) & (original description: Putative MTR_6g049450, Description = TPR protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3601_168994-171456' ' (original description: Putative At2g07010, Description = Putative retroelement pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3608_180473-183714' '(at2g39120 : 457.0) Ubiquitin carboxyl-terminal hydrolase family protein; LOCATED IN: mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant (InterPro:IPR021099); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein (TAIR:AT3G58520.1); Has 404 Blast hits to 398 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 404; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 914.0) & (original description: Putative At2g39120, Description = Group II intron splicing protein WTF9, PFAM = PF11955)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3610_1-6445' ' (original description: Putative PGSC0003DMG400000002, Description = Putative vacuolar iron transporter 1.1-like, PFAM = PF01988)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3610_227366-235284' '(at4g31010 : 423.0) RNA-binding CRS1 / YhbY (CRM) domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain-containing protein (TAIR:AT5G54890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 846.0) & (original description: Putative At4g31010, Description = CRS2-associated factor 1, mitochondrial, PFAM = PF01985)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3620_29666-59447' '(at5g63100 : 306.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G44600.1); Has 163 Blast hits to 163 proteins in 58 species: Archae - 2; Bacteria - 69; Metazoa - 2; Fungi - 2; Plants - 84; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 612.0) & (original description: Putative At5g63100, Description = S-adenosyl-L-methionine-dependent methyltransferase domain-containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3624_237184-241009' '(at2g35820 : 247.0) ureidoglycolate hydrolases; FUNCTIONS IN: ureidoglycolate hydrolase activity; INVOLVED IN: allantoin catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ureidoglycolate hydrolase (InterPro:IPR007247); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35810.1); Has 155 Blast hits to 155 proteins in 53 species: Archae - 0; Bacteria - 64; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 494.0) & (original description: Putative all3023, Description = All3023 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3642_94370-96966' ' (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3647_96770-102136' ' no hits & (original description: Putative At4g37600, Description = Putative uncharacterized protein AT4g37600, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3652_124457-127017' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3681_182090-186507' '(at1g12380 : 988.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62870.1); Has 173 Blast hits to 170 proteins in 34 species: Archae - 0; Bacteria - 4; Metazoa - 25; Fungi - 8; Plants - 123; Viruses - 7; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 1976.0) & (original description: Putative At1g12380, Description = F5O11.10, PFAM = PF04937)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3689_62876-68652' '(at4g28760 : 553.0) Protein of unknown function (DUF3741); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3741) (TAIR:AT2G20240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1106.0) & (original description: Putative , Description = , PFAM = PF14309;PF14383;PF12552)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3692_42258-47798' '(at3g11590 : 402.0) unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22310.1); Has 22320 Blast hits to 15179 proteins in 1213 species: Archae - 372; Bacteria - 2307; Metazoa - 10906; Fungi - 1700; Plants - 1146; Viruses - 65; Other Eukaryotes - 5824 (source: NCBI BLink). & (reliability: 804.0) & (original description: Putative F24K9.26, Description = At3g11590/F24K9_26, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3705_121392-127745' '(at3g07660 : 270.0) Kinase-related protein of unknown function (DUF1296); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1296 (InterPro:IPR009719); BEST Arabidopsis thaliana protein match is: Kinase-related protein of unknown function (DUF1296) (TAIR:AT3G13990.1); Has 3086 Blast hits to 1914 proteins in 327 species: Archae - 2; Bacteria - 372; Metazoa - 1089; Fungi - 466; Plants - 245; Viruses - 13; Other Eukaryotes - 899 (source: NCBI BLink). & (reliability: 540.0) & (original description: Putative glysoja_009409, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3708_212843-215353' ' no hits & (original description: Putative , Description = CASP-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3709_79499-83154' '(at5g27010 : 134.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G06350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3730_126218-129786' ' no hits & (original description: Putative str246N, Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, putative, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3738_68251-72269' '(at3g15095 : 106.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative hcf243, Description = Chloroplast protein HCF243, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3743_60962-63285' ' no hits & (original description: Putative At2g06320, Description = Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3748_82892-85239' ' no hits & (original description: Putative EN6, Description = AtbHLH36, PFAM = PF00010)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3762_136384-139856' '(at5g22090 : 98.2) Protein of unknown function (DUF3049); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) (TAIR:AT4G02810.1). & (reliability: 196.4) & (original description: Putative , Description = Chaperone DnaJ-domain superfamily protein, PFAM = PF11250)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3766_97741-103782' ' no hits & (original description: Putative NAC1, Description = NAC transcription factor, PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3767_52316-62106' '(at1g06590 : 433.0) unknown protein; Has 380 Blast hits to 268 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 245; Fungi - 73; Plants - 49; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|39523 : 172.0) no description available & (reliability: 866.0) & (original description: Putative APC5, Description = Cyclosome subunit 5, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3776_44101-54757' '(at1g17080 : 100.0) Ribosomal protein L18ae family; BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT1G53560.1); Has 119 Blast hits to 119 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 119; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative RPL18aA, Description = 60S ribosomal protein L18aA, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3785_181780-192087' '(at5g37360 : 281.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 562.0) & (original description: Putative At5g37360, Description = AT5g37360/MNJ8_150, PFAM = PF11282)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3787_157734-170661' '(at5g05230 : 227.0) RING/U-box superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G40640.1); Has 107 Blast hits to 107 proteins in 24 species: Archae - 0; Bacteria - 4; Metazoa - 14; Fungi - 6; Plants - 79; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative BnaC05g35490D, Description = BnaC05g35490D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3801_179109-181453' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3803_214275-220777' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3833_1-1837' ' no hits & (original description: Putative Sb03g003320, Description = Serine/threonine-protein kinase CBK1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3835_167767-190258' '(at4g30990 : 2066.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus; CONTAINS InterPro DOMAIN/s: Down-regulated-in-metastasis protein (InterPro:IPR011430), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36722.1); Has 688 Blast hits to 408 proteins in 187 species: Archae - 0; Bacteria - 2; Metazoa - 220; Fungi - 235; Plants - 93; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|37034 : 309.0) no description available & (gnl|cdd|70987 : 124.0) no description available & (reliability: 4132.0) & (original description: Putative Sb03g026160, Description = Putative uncharacterized protein Sb03g026160, PFAM = PF07539)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3840_11026-21707' '(at1g58520 : 719.0) RXW8; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G59406.1); Has 3216 Blast hits to 3174 proteins in 135 species: Archae - 0; Bacteria - 157; Metazoa - 0; Fungi - 2; Plants - 3048; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|36349 : 455.0) no description available & (gnl|cdd|66403 : 331.0) no description available & (reliability: 1438.0) & (original description: Putative RXW8, Description = CSC1-like protein RXW8, PFAM = PF13967;PF02714;PF14703)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3854_123490-127336' '(at1g32583 : 154.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: tapetum determinant 1 (TAIR:AT4G24972.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative TDL1, Description = TPD1 protein homolog 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3861_1-7678' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3861_1904-166736' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Retrovirus-related Pol polyprotein LINE-1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3879_331691-334313' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3882_100871-103221' ' no hits & (original description: Putative , Description = Lipid transfer protein, PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3882_101865-106762' ' no hits & (original description: Putative PGSC0003DMG400000218, Description = , PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3887_6411-11263' '(at4g18590 : 155.0) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Replication factor A protein 3 (InterPro:IPR013970), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT3G52630.2); Has 94 Blast hits to 94 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 2; Plants - 56; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|72086 : 82.6) no description available & (reliability: 310.0) & (original description: Putative RPA3B, Description = Replication protein A 14 kDa subunit B, PFAM = PF08661)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3887_199745-210204' ' (original description: Putative Sb02g006510, Description = Putative uncharacterized protein Sb02g006510, PFAM = PF01081)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3895_173586-178774' '(at2g30900 : 293.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 43 (TBL43); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 42 (TAIR:AT1G78710.1); Has 1340 Blast hits to 1315 proteins in 29 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 1338; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 152.0) no description available & (reliability: 586.0) & (original description: Putative gal2, Description = Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein, PFAM = PF13839)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3899_211106-213445' '(at1g09610 : 392.0) Protein of unknown function (DUF579); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF579 (InterPro:IPR021148), Conserved hypothetical protein CHP01627 (InterPro:IPR006514); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF579) (TAIR:AT4G09990.1); Has 252 Blast hits to 251 proteins in 20 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 240; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|68247 : 363.0) no description available & (reliability: 784.0) & (original description: Putative GXM1, Description = Glucuronoxylan 4-O-methyltransferase 1, PFAM = PF04669)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3921_126136-133522' '(at5g25590 : 530.0) INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52320.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68357 : 274.0) no description available & (reliability: 1060.0) & (original description: Putative BnaC07g29160D, Description = BnaC07g29160D protein, PFAM = PF04782;PF04783)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3930_211605-216560' ' no hits & (original description: Putative PGSC0003DMG400047107, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3952_14262-16895' '(at4g25030 : 154.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G45410.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative At4g25030, Description = AT4G25030 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3956_214551-218790' ' no hits & (original description: Putative PGSC0003DMG400030244, Description = , PFAM = PF14383)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3969_190479-193475' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3974_29045-31064' '(at5g61340 : 91.7) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative PGSC0003DMG400024664, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3976_31137-34249' ' no hits & (original description: Putative PGSC0003DMG400004703, Description = , PFAM = PF03242)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3977_35749-38435' ' no hits & (original description: Putative PGSC0003DMG400001172, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3979_102391-108255' '(at4g30993 : 116.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold3981_118833-121873' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4001_103496-110200' '(at3g06080 : 528.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 11 (TAIR:AT5G19160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72785 : 130.0) no description available & (reliability: 1056.0) & (original description: Putative TBL10, Description = Protein trichome birefringence-like 10, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4006_74268-105232' '(at5g24310 : 156.0) One of four ABI-like proteins. Involved in trichome morphogenesis, root elongation. Associates with microtubules.; ABL interactor-like protein 3 (ABIL3); BEST Arabidopsis thaliana protein match is: ABL interactor-like protein 2 (TAIR:AT3G49290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5jkn2|abil2_orysa : 115.0) Putative protein ABIL2 (Abl interactor-like protein 2) - Oryza sativa (Rice) & (reliability: 312.0) & (original description: Putative ABIL1, Description = Abl interactor-like protein 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4009_32713-38677' '(at4g19540 : 243.0) IND1(iron-sulfur protein required for NADH dehydrogenase)-like (INDL); LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ParA/MinD (InterPro:IPR019591); BEST Arabidopsis thaliana protein match is: ATP binding (TAIR:AT3G24430.1); Has 13193 Blast hits to 13164 proteins in 2587 species: Archae - 550; Bacteria - 7572; Metazoa - 442; Fungi - 431; Plants - 201; Viruses - 0; Other Eukaryotes - 3997 (source: NCBI BLink). & (gnl|cdd|38232 : 220.0) no description available & (gnl|cdd|83937 : 220.0) no description available & (reliability: 486.0) & (original description: Putative apbC, Description = Iron-sulfur cluster carrier protein, PFAM = PF10609)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4009_185141-187461' ' no hits & (original description: Putative PGSC0003DMG400004421, Description = Beta-1,3-N-acetylglucosaminyltransferase family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4010_153326-155736' ' no hits & (original description: Putative , Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4011_15213-22237' ' no hits & (original description: Putative NaP18, Description = Putative ovule protein, PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4012_153136-160876' '(at2g40316 : 208.0) FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 27 (InterPro:IPR018939); Has 135 Blast hits to 135 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi - 63; Plants - 31; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 416.0) & (original description: Putative T07M07.21, Description = Putative uncharacterized protein At2g40316, PFAM = PF09451)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4018_104536-106925' ' no hits & (original description: Putative , Description = Chloride channel protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4026_41995-49785' '(at3g19340 : 300.0) LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3754 (InterPro:IPR022227); BEST Arabidopsis thaliana protein match is: aminopeptidases (TAIR:AT5G13940.1); Has 308 Blast hits to 303 proteins in 113 species: Archae - 0; Bacteria - 164; Metazoa - 10; Fungi - 0; Plants - 111; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 600.0) & (original description: Putative At3g19340, Description = Putative disease resistance protein-like, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4033_12346-14769' ' no hits & (original description: Putative , Description = Clathrin light chain 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4042_71539-81117' '(at5g25360 : 149.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1). & (reliability: 298.0) & (original description: Putative At3g15770, Description = AT3G15770 protein, PFAM = PF13259;PF13259)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4050_55286-66699' '(at3g10650 : 221.0) BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast hits to 31782 proteins in 2093 species: Archae - 202; Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants - 1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative PGSC0003DMG400023499, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4073_72280-76122' '(at2g20820 : 82.0) unknown protein; Has 36 Blast hits to 36 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative PGSC0003DMG400013747, Description = Os03g0581800 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4079_124274-129214' ' no hits & (original description: Putative PGSC0003DMG400016532, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4084_33221-37298' ' no hits & (original description: Putative PGSC0003DMG400015227, Description = Centromere protein X isoform 1, PFAM = PF09415)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4084_169989-176393' '(at4g24760 : 523.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G14390.1); Has 3811 Blast hits to 3801 proteins in 821 species: Archae - 8; Bacteria - 1310; Metazoa - 620; Fungi - 194; Plants - 289; Viruses - 6; Other Eukaryotes - 1384 (source: NCBI BLink). & (gnl|cdd|36765 : 347.0) no description available & (reliability: 1046.0) & (original description: Putative abhd17c, Description = Protein ABHD17C, PFAM = PF12146)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4088_53293-64639' '(at2g02148 : 436.0) unknown protein. & (reliability: 872.0) & (original description: Putative TCM_011096, Description = Uncharacterized protein isoform 3, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4099_194941-202135' '(at1g42480 : 154.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3456 (InterPro:IPR021852); Has 152 Blast hits to 152 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative PGSC0003DMG400009913, Description = Canopy-like protein, PFAM = PF11938)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4121_183384-193286' '(at3g05070 : 107.0) CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18 (InterPro:IPR013169); Has 292 Blast hits to 292 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi - 83; Plants - 38; Viruses - 11; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|87492 : 85.8) no description available & (reliability: 214.0) & (original description: Putative At3g05070, Description = At3g05070, PFAM = PF08315)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4124_192466-194999' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4125_102317-105971' '(at5g51110 : 206.0) Transcriptional coactivator/pterin dehydratase; FUNCTIONS IN: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; INVOLVED IN: tetrahydrobiopterin biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional coactivator/pterin dehydratase (InterPro:IPR001533); BEST Arabidopsis thaliana protein match is: Transcriptional coactivator/pterin dehydratase (TAIR:AT1G29810.1). & (gnl|cdd|48349 : 81.0) no description available & (reliability: 412.0) & (original description: Putative pdl1, Description = Putative pterin-4-alpha-carbinolamine dehydratase, PFAM = PF01329)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4144_144836-155696' '(at2g32640 : 773.0) Lycopene beta/epsilon cyclase protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; INVOLVED IN: carotenoid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lycopene beta/epsilon cyclase (InterPro:IPR008671); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1546.0) & (original description: Putative cruP, Description = Lycopene cyclase, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4145_137496-145428' '(at1g50120 : 106.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rgp1 (InterPro:IPR014848), Immunoglobulin E-set (InterPro:IPR014756); Has 144 Blast hits to 140 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 86; Fungi - 10; Plants - 39; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative At1g50120, Description = Putative uncharacterized protein At1g50120, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4153_87276-91174' '(at5g62960 : 256.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 512.0) & (original description: Putative Os02g0130600, Description = Os02g0130600 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4157_110672-115158' ' no hits & (original description: Putative PGSC0003DMG400004801, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4157_188905-191348' ' (original description: Putative extA, Description = Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, PFAM = PF14547)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4158_199797-203390' ' no hits & (original description: Putative PGSC0003DMG400008430, Description = Putative ovule protein, PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4173_137823-149058' '(at1g26110 : 132.0) Encodes Decapping 5, required for mRNA decapping, P-body formation and translational repression during postembryonic development.; decapping 5 (DCP5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: negative regulation of translation, deadenylation-independent decapping of nuclear-transcribed mRNA, cytoplasmic mRNA processing body assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DFDF motif (InterPro:IPR019050), FFD/TFG box motif (InterPro:IPR019053); BEST Arabidopsis thaliana protein match is: decapping 5-like (TAIR:AT5G45330.1); Has 14874 Blast hits to 10327 proteins in 603 species: Archae - 12; Bacteria - 902; Metazoa - 6418; Fungi - 2978; Plants - 1226; Viruses - 261; Other Eukaryotes - 3077 (source: NCBI BLink). & (gnl|cdd|29723 : 129.0) no description available & (gnl|cdd|36290 : 121.0) no description available & (reliability: 264.0) & (original description: Putative sum2, Description = G2/M transition checkpoint protein Sum2, PFAM = PF09532;PF12701)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4176_43183-172297' '(at5g50290 : 360.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 300 Blast hits to 300 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 300; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 720.0) & (original description: Putative BnaA03g23400D, Description = BnaA03g23400D protein, PFAM = PF13947)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4182_123975-155208' '(at1g78915 : 369.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734). & (reliability: 738.0) & (original description: Putative At1g78915, Description = Tetratricopeptide repeat-containing protein, PFAM = PF13174;PF13432)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4207_52247-55227' ' no hits & (original description: Putative BKI1, Description = BRI1 kinase inhibitor 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4210_57564-63867' ' no hits & (original description: Putative PGSC0003DMG400027026, Description = ABC transporter B family member 19, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4212_11006-17323' '(at5g20270 : 114.0) heptahelical transmembrane protein homologous to human adiponectin receptors and progestin receptors; heptahelical transmembrane protein1 (HHP1); FUNCTIONS IN: receptor activity; INVOLVED IN: response to salt stress, response to hormone stimulus, response to sucrose stimulus; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hly-III related (InterPro:IPR004254); BEST Arabidopsis thaliana protein match is: heptahelical transmembrane protein2 (TAIR:AT4G30850.2); Has 2727 Blast hits to 2656 proteins in 794 species: Archae - 0; Bacteria - 1143; Metazoa - 823; Fungi - 356; Plants - 236; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (gnl|cdd|35967 : 98.4) no description available & (reliability: 228.0) & (original description: Putative HHP1, Description = Hemolysin-III-like protein, PFAM = PF03006)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4217_14344-23169' ' no hits & (original description: Putative PGSC0003DMG400023486, Description = E3 ubiquitin-protein ligase ATL59, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4219_100917-188651' '(at4g27350 : 194.0) Protein of unknown function (DUF1223); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1223 (InterPro:IPR010634); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1223) (TAIR:AT5G54240.1); Has 527 Blast hits to 527 proteins in 230 species: Archae - 0; Bacteria - 439; Metazoa - 0; Fungi - 4; Plants - 46; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|87149 : 147.0) no description available & (reliability: 388.0) & (original description: Putative Os07g0559400, Description = Membrane lipoprotein lipid attachment site-containing protein-like, PFAM = PF06764)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4219_156130-158417' ' no hits & (original description: Putative MTR_2g081155, Description = Wound-responsive family protein, PFAM = PF12609)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4221_2577-33050' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF05970)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4221_8762-11437' ' no hits & (original description: Putative PGSC0003DMG400018667, Description = Alpha/gamma-adaptin-binding protein p34, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4273_127426-131355' ' no hits & (original description: Putative RFI2, Description = Zinc finger, RING/FYVE/PHD-type, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4274_94661-113469' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4283_1-18078' '(at5g60370 : 349.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Defects-in-morphology protein 1-like, mitochondrial (InterPro:IPR019190); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38557 : 234.0) no description available & (gnl|cdd|32119 : 139.0) no description available & (reliability: 698.0) & (original description: Putative ak6, Description = AK6, PFAM = PF13238;PF09810;PF09810;PF09810)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4291_176242-179339' '(at3g03210 : 263.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 59 Blast hits to 59 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative BnaA05g32440D, Description = BnaA05g32440D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4294_150994-159813' '(at5g11420 : 550.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF642 (TAIR:AT5G25460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68437 : 547.0) no description available & (reliability: 1100.0) & (original description: Putative Sb06g021320, Description = Putative uncharacterized protein Sb06g021320, PFAM = PF04862;PF04862)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4301_99829-102890' ' no hits & (original description: Putative , Description = Iron import ATP-binding/permease IrtA, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4321_65639-74752' '(at5g02520 : 96.3) CONTAINS InterPro DOMAIN/s: SANT associated (InterPro:IPR015216); BEST Arabidopsis thaliana protein match is: kinase interacting family protein (TAIR:AT1G58210.1); Has 842 Blast hits to 736 proteins in 154 species: Archae - 2; Bacteria - 99; Metazoa - 236; Fungi - 52; Plants - 90; Viruses - 0; Other Eukaryotes - 363 (source: NCBI BLink). & (gnl|cdd|72550 : 88.8) no description available & (reliability: 192.6) & (original description: Putative , Description = , PFAM = PF09133)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4345_903-3800' ' no hits & (original description: Putative Tgt1ORF2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4362_79979-91217' '(at2g05120 : 1362.0) Nucleoporin, Nup133/Nup155-like; CONTAINS InterPro DOMAIN/s: Nucleoporin, Nup133/Nup155-like, N-terminal (InterPro:IPR014908), Nucleoporin, Nup133/Nup155-like, C-terminal (InterPro:IPR007187). & (gnl|cdd|87659 : 110.0) no description available & (reliability: 2724.0) & (original description: Putative NUP133, Description = Nuclear pore complex protein NUP133, PFAM = PF08801)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4365_92793-96270' ' (original description: Putative rpp2, Description = 60S acidic ribosomal protein P2, PFAM = PF00428)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4366_51428-54474' '(at5g03110 : 99.4) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: protamine P1 family protein (TAIR:AT2G37100.1); Has 81 Blast hits to 73 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 198.8) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4387_173637-176554' '(at5g19260 : 87.4) Protein of unknown function (DUF3049); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) (TAIR:AT3G06020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative PGSC0003DMG400009028, Description = Protein FANTASTIC FOUR 3, PFAM = PF11250)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4392_34819-38052' ' no hits & (original description: Putative orf135, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4392_156766-180078' '(at5g24740 : 214.0) EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (gnl|cdd|34648 : 104.0) no description available & (gnl|cdd|37020 : 103.0) no description available & (reliability: 428.0) & (original description: Putative At5g24740, Description = VPS13-like protein, PFAM = PF12624;PF16908)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4397_42371-51250' '(at1g70950 : 100.0) TPX2 (targeting protein for Xklp2) protein family; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23060.1); Has 1245 Blast hits to 1139 proteins in 232 species: Archae - 0; Bacteria - 257; Metazoa - 305; Fungi - 75; Plants - 372; Viruses - 3; Other Eukaryotes - 233 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative WDL3, Description = TPX2 (Targeting protein for Xklp2) family protein, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4409_22218-28772' '(at3g23740 : 118.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14120.1); Has 155 Blast hits to 130 proteins in 48 species: Archae - 0; Bacteria - 16; Metazoa - 19; Fungi - 48; Plants - 47; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative , Description = Arginine--tRNA ligase, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4410_2978-6339' '(at5g05950 : 201.0) maternal effect embryo arrest 60 (MEE60); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative MEE60, Description = At5g05950, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4425_26649-28948' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4470_120983-137644' '(at4g04920 : 927.0) Encodes a nuclear targeted protein that plays a role in the CBF pathway -downstream of CBF translation. Mutants have impaired cold responses, reduced levels of cold induced RNA transcripts, are sensitive to osmotic stress.; SENSITIVE TO FREEZING 6 (SFR6); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cold acclimation, circadian regulation of gene expression, response to osmotic stress, regulation of long-day photoperiodism, flowering; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages. & (reliability: 1854.0) & (original description: Putative SFR6, Description = BnaA09g20140D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4472_146158-155063' '(at1g27150 : 555.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G27110.1); Has 429 Blast hits to 423 proteins in 137 species: Archae - 5; Bacteria - 191; Metazoa - 78; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). & (gnl|cdd|37821 : 295.0) no description available & (reliability: 1110.0) & (original description: Putative BnaA07g09140D, Description = BnaA07g09140D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4472_188694-191140' ' no hits & (original description: Putative BH1, Description = HAT family dimerisation domain containing protein, PFAM = PF05699)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4481_31232-103677' '(at2g38320 : 437.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 34 (TBL34); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 35 (TAIR:AT5G01620.2); Has 1346 Blast hits to 1317 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 1344; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|72785 : 179.0) no description available & (reliability: 874.0) & (original description: Putative TBL34, Description = Protein trichome birefringence-like 34, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4493_73569-78506' '(at3g11590 : 315.0) unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22310.1); Has 22320 Blast hits to 15179 proteins in 1213 species: Archae - 372; Bacteria - 2307; Metazoa - 10906; Fungi - 1700; Plants - 1146; Viruses - 65; Other Eukaryotes - 5824 (source: NCBI BLink). & (reliability: 630.0) & (original description: Putative PGSC0003DMG400005891, Description = Plant/F24K9-26 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4497_1-67866' '(at5g51170 : 200.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0406 (InterPro:IPR019146); Has 166 Blast hits to 166 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 19; Plants - 35; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|38312 : 156.0) no description available & (reliability: 400.0) & (original description: Putative At5g51170, Description = U6 snRNA phosphodiesterase, PFAM = PF09749)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4501_53240-56011' ' no hits & (original description: Putative TCM_000913, Description = Hydroxyproline-rich glycoprotein family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4505_110337-113620' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4509_137963-146000' '(at5g48830 : 337.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 674.0) & (original description: Putative BnaC07g26780D, Description = BnaC07g26780D protein, PFAM = PF12452)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4518_47061-137976' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4563_140029-145881' '(at2g03420 : 135.0) unknown protein; Has 38 Blast hits to 38 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4565_78920-86684' '(at2g36650 : 126.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4576_63353-65650' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4578_134128-142615' '(at2g23530 : 236.0) Zinc-finger domain of monoamine-oxidase A repressor R1; CONTAINS InterPro DOMAIN/s: Cell division cycle-associated protein (InterPro:IPR018866); BEST Arabidopsis thaliana protein match is: Zinc-finger domain of monoamine-oxidase A repressor R1 (TAIR:AT4G37110.1); Has 512 Blast hits to 506 proteins in 112 species: Archae - 0; Bacteria - 4; Metazoa - 144; Fungi - 73; Plants - 256; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative cdca7, Description = Cell division cycle-associated 7-like protein, PFAM = PF10497)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4580_7703-10343' ' no hits & (original description: Putative TCM_038088, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4606_1333-7212' '(at1g13340 : 230.0) Regulator of Vps4 activity in the MVB pathway protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061); BEST Arabidopsis thaliana protein match is: Regulator of Vps4 activity in the MVB pathway protein (TAIR:AT1G34220.2); Has 628 Blast hits to 628 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 164; Fungi - 130; Plants - 284; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|37238 : 195.0) no description available & (gnl|cdd|67036 : 119.0) no description available & (reliability: 460.0) & (original description: Putative Sb01g010490, Description = Putative uncharacterized protein Sb01g010490, PFAM = PF03398)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4680_2000-7845' ' no hits & (original description: Putative Os03g0703300, Description = Putative dentin sialophosphoprotein-like, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4684_26105-37835' ' no hits & (original description: Putative , Description = Gamma-tubulin complex component, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4684_26583-37865' ' no hits & (original description: Putative CICLE_v10029535mg, Description = Gamma-tubulin complex component, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4685_29108-32878' '(at1g21830 : 110.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G44608.1); Has 49 Blast hits to 49 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative , Description = , PFAM = PF05340)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4691_1-7092' '(at5g63910 : 214.0) Encodes a farnesylcysteine lyase (EC 1.8.3.5) involved in a salvage /detoxification pathway of farnesylcysteine (FC) residues that are liberated during the degradation of prenylated proteins. Because FC is a competitive inhibitor of prenylcysteine methyltransferases involved in the down-regulation of ABA signaling, fcly mutants with elevated FC levels are hypersensitive to ABA. The protein also appears to be glycosylated when translated in vitro in the presence of microsomal membranes and it likely requires FAD for enzymatic activity.; farnesylcysteine lyase (FCLY); FUNCTIONS IN: prenylcysteine oxidase activity; INVOLVED IN: prenylated protein catabolic process, abscisic acid mediated signaling pathway, farnesyl diphosphate metabolic process; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prenylcysteine lyase (InterPro:IPR010795), Prenylcysteine oxidase (InterPro:IPR017046); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87223 : 86.2) no description available & (reliability: 428.0) & (original description: Putative FCLY, Description = Farnesylcysteine lyase, PFAM = PF07156;PF13450)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4700_140218-142574' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4706_5239-11920' '(at1g09195 : 394.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Ppx/GppA phosphatase (InterPro:IPR003695). & (gnl|cdd|30597 : 249.0) no description available & (reliability: 788.0) & (original description: Putative ppx, Description = Ppx-GppA phosphatase protein (Exopolyphosphatase), PFAM = PF02541)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4709_61816-65985' ' no hits & (original description: Putative , Description = , PFAM = PF05904)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4709_117578-120972' ' no hits & (original description: Putative , Description = Remorin, C-terminal, PFAM = PF03763)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4719_53079-55651' '(at1g52140 : 105.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative PGSC0003DMG400000363, Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4730_68349-137863' ' (original description: Putative PGSC0003DMG400019390, Description = Callose synthase 9, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4739_111332-113721' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4751_83442-86811' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551;PF04434)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4775_3342-14481' '(at2g25737 : 308.0) Sulfite exporter TauE/SafE family protein; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF81 (InterPro:IPR002781); BEST Arabidopsis thaliana protein match is: Sulfite exporter TauE/SafE family protein (TAIR:AT2G36630.1); Has 3417 Blast hits to 2961 proteins in 724 species: Archae - 129; Bacteria - 1927; Metazoa - 0; Fungi - 0; Plants - 198; Viruses - 0; Other Eukaryotes - 1163 (source: NCBI BLink). & (reliability: 616.0) & (original description: Putative PGSC0003DMG400002544, Description = Sulfite exporter TauE/SafE family protein, PFAM = PF01925;PF01925)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4813_10691-14844' '(at3g15095 : 128.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative hcf243, Description = Chloroplast protein HCF243, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4818_56652-88339' '(at4g32930 : 174.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF866, eukaryotic (InterPro:IPR008584). & (gnl|cdd|86976 : 149.0) no description available & (gnl|cdd|36510 : 147.0) no description available & (reliability: 348.0) & (original description: Putative , Description = , PFAM = PF05907)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4820_60974-63339' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4824_90699-96979' '(at3g30380 : 339.0) alpha/beta-Hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G01690.1); Has 4039 Blast hits to 4030 proteins in 818 species: Archae - 8; Bacteria - 1345; Metazoa - 714; Fungi - 203; Plants - 307; Viruses - 6; Other Eukaryotes - 1456 (source: NCBI BLink). & (gnl|cdd|36765 : 237.0) no description available & (reliability: 678.0) & (original description: Putative hyd, Description = Abhydrolase domain-containing protein FAM108C1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4824_94081-98642' '(at3g30380 : 179.0) alpha/beta-Hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G01690.1); Has 4039 Blast hits to 4030 proteins in 818 species: Archae - 8; Bacteria - 1345; Metazoa - 714; Fungi - 203; Plants - 307; Viruses - 6; Other Eukaryotes - 1456 (source: NCBI BLink). & (gnl|cdd|36765 : 87.3) no description available & (reliability: 358.0) & (original description: Putative At1g66900, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4826_150535-152951' ' no hits & (original description: Putative , Description = , PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4847_67714-72029' '(at3g54000 : 82.4) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4852_30776-61480' ' no hits & (original description: Putative , Description = Gag/pol protein, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4860_35159-46095' ' no hits & (original description: Putative PGSC0003DMG400023207, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, expressed, PFAM = PF13963)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4860_150432-172291' '(at1g53200 : 220.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative , Description = Ran GTPase, PFAM = PF14929)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4887_78940-81374' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4897_48785-52620' '(at3g23160 : 516.0) Protein of unknown function (DUF668); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700), Protein of unknown function DUF3475 (InterPro:IPR021864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT5G04550.1); Has 431 Blast hits to 290 proteins in 19 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 424; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|68572 : 130.0) no description available & (reliability: 1032.0) & (original description: Putative BnaAnng08110D, Description = BnaAnng08110D protein, PFAM = PF05003;PF11961)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4900_153906-161339' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4902_147014-152957' '(at1g54990 : 434.0) auxin response mutant (AXR4); AUXIN RESISTANT 4 (AXR4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to mechanical stimulus, auxin polar transport; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; Has 139 Blast hits to 139 proteins in 43 species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 868.0) & (original description: Putative AXR4, Description = Protein AUXIN RESPONSE 4, PFAM = PF12697)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4906_55905-60629' '(at4g20170 : 582.0) Domain of unknown function (DUF23); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF23) (TAIR:AT5G44670.1); Has 199 Blast hits to 199 proteins in 36 species: Archae - 0; Bacteria - 27; Metazoa - 44; Fungi - 2; Plants - 116; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|85620 : 110.0) no description available & (gnl|cdd|39932 : 102.0) no description available & (reliability: 1164.0) & (original description: Putative GALS3, Description = Galactan beta-1,4-galactosyltransferase GALS3, PFAM = PF01697)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4930_56604-59041' ' no hits & (original description: Putative TCM_045071, Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, putative, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4931_52194-65977' '(at3g10650 : 182.0) BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast hits to 31782 proteins in 2093 species: Archae - 202; Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants - 1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative PGSC0003DMG400023499, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4933_47764-50342' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4940_124694-128180' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4941_1-7749' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4943_103482-106046' ' no hits & (original description: Putative PGSC0003DMG400020295, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4949_71904-129433' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Retrovirus-related Pol polyprotein LINE-1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4955_72708-80154' '(at1g53400 : 176.0) Ubiquitin domain-containing protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Ubiquitin domain-containing protein (TAIR:AT5G45740.1); Has 319 Blast hits to 318 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 63; Plants - 89; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|35237 : 120.0) no description available & (reliability: 352.0) & (original description: Putative ubtd2, Description = Ubiquitin domain-containing protein 2, PFAM = PF16455)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4979_22400-24595' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4997_105685-115769' '(at4g03200 : 1176.0) catalytics; FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF255 (InterPro:IPR004879), Six-hairpin glycosidase-like (InterPro:IPR008928), Thioredoxin-like fold (InterPro:IPR012336); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37455 : 913.0) no description available & (gnl|cdd|31522 : 642.0) no description available & (reliability: 2352.0) & (original description: Putative tmk2, Description = Spermatogenesis-associated protein 20, PFAM = PF03190)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold4997_139691-155358' '(at3g62900 : 253.0) CW-type Zinc Finger; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: trichome; CONTAINS InterPro DOMAIN/s: Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02990.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative At3g62900, Description = CW-type zinc-finger protein, PFAM = PF07496)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5016_63728-66221' ' no hits & (original description: Putative , Description = , PFAM = PF10536)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5029_118640-124174' '(at2g22720 : 82.4) SPT2 chromatin protein; CONTAINS InterPro DOMAIN/s: Chromatin SPT2 (InterPro:IPR013256); BEST Arabidopsis thaliana protein match is: SPT2 chromatin protein (TAIR:AT4G37860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative glysoja_040091, Description = 60S ribosomal protein L24, PFAM = PF08243)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5032_259-2810' '(at5g25500 : 154.0) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5038_62229-85488' '(at5g38880 : 949.0) unknown protein; Has 474 Blast hits to 433 proteins in 138 species: Archae - 6; Bacteria - 80; Metazoa - 195; Fungi - 44; Plants - 59; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (reliability: 1898.0) & (original description: Putative 38565, Description = AUGMIN subunit 5, PFAM = PF14817)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5072_132678-135740' ' no hits & (original description: Putative Os12g0499874, Description = DNA/RNA polymerases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5072_132801-136013' ' no hits & (original description: Putative Tgt1ORF2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5072_133519-136839' ' no hits & (original description: Putative Tgt1ORF2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5079_152464-154859' ' no hits & (original description: Putative , Description = ORF107c, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5081_157264-161009' ' no hits & (original description: Putative GNC, Description = GATA transcription factor 16, PFAM = PF00320)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5083_20064-24837' '(at4g10300 : 172.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Protein of unknown function DUF861, cupin-3 (InterPro:IPR008579), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04300.1); Has 485 Blast hits to 485 proteins in 129 species: Archae - 0; Bacteria - 243; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (gnl|cdd|69424 : 94.9) no description available & (reliability: 344.0) & (original description: Putative F24G24.100, Description = At4g10300, PFAM = PF05899)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5098_131124-133617' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5132_110433-112948' ' no hits & (original description: Putative , Description = , PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5133_150675-153619' ' no hits & (original description: Putative IKU1, Description = AtVQ14, PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5134_65679-68805' '(at4g32480 : 218.0) Protein of unknown function (DUF506) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT2G20670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68298 : 178.0) no description available & (reliability: 436.0) & (original description: Putative At2g20670, Description = Expressed protein, PFAM = PF04720)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5141_23867-35749' '(at2g43540 : 117.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 27 Blast hits to 27 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative At2g43540, Description = At2g43540, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5151_83400-85857' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5151_98053-109805' '(at1g50730 : 235.0) unknown protein; Has 218 Blast hits to 209 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 141; Fungi - 2; Plants - 33; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|38886 : 169.0) no description available & (reliability: 470.0) & (original description: Putative At1g50730, Description = Esophageal cancer associated protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5177_77199-79510' ' no hits & (original description: Putative glysoja_043005, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5190_34226-41948' '(at5g56210 : 151.0) WPP domain interacting protein 2 (WIP2); BEST Arabidopsis thaliana protein match is: WPP domain interacting protein 1 (TAIR:AT4G26455.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative PGSC0003DMG400022146, Description = Putative WPP domain-interacting protein 2-like, PFAM = PF12152)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5190_61973-66394' '(at5g56220 : 1259.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: apoptosis; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS class) (TAIR:AT4G23440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 2518.0) & (original description: Putative At5g56220, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5206_70126-74109' ' no hits & (original description: Putative PGSC0003DMG400001509, Description = KEN domain-containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5208_35446-52986' ' no hits & (original description: Putative MSB1, Description = Rhodopsin, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5220_38159-43007' '(at5g01710 : 499.0) methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Methyltransferase FkbM (InterPro:IPR006342), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 998.0) & (original description: Putative BnaC03g00080D, Description = BnaC03g00080D protein, PFAM = PF08241)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5221_67592-70596' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5243_162253-165299' '(at5g59350 : 156.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative BnaC02g10010D, Description = BnaC02g10010D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5266_140811-145370' ' no hits & (original description: Putative BS2, Description = Disease resistance protein BS2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5268_25739-28253' ' no hits & (original description: Putative , Description = Integrase core domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5274_30320-32856' ' (original description: Putative RPB1, Description = Cell wall hydroxyproline-rich glycoprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5287_89687-98337' '(at1g30755 : 397.0) Protein of unknown function (DUF668); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700), Protein of unknown function DUF3475 (InterPro:IPR021864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT1G34320.1); Has 465 Blast hits to 399 proteins in 71 species: Archae - 2; Bacteria - 14; Metazoa - 66; Fungi - 16; Plants - 336; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (reliability: 794.0) & (original description: Putative At1g34320, Description = DUF668 family protein, PFAM = PF11961;PF05003)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5303_120795-123246' ' (original description: Putative pol, Description = Retrotransposon protein, putative, unclassified, PFAM = PF07727)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5341_71187-75071' '(at2g12646 : 207.0) PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT3G60670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative , Description = PLATZ transcription factor family protein, PFAM = PF04640)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5343_117672-120268' ' no hits & (original description: Putative , Description = Nucleotide-diphospho-sugar transferase family protein, putative, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5381_123881-128714' '(at5g62170 : 231.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G51850.1); Has 381 Blast hits to 359 proteins in 81 species: Archae - 0; Bacteria - 16; Metazoa - 101; Fungi - 21; Plants - 99; Viruses - 3; Other Eukaryotes - 141 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative F383_01476, Description = Anhydro-N-acetylmuramic acid kinase, PFAM = PF14383;PF14309)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5386_3213-5781' ' no hits & (original description: Putative Os10g0106900, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5386_26280-29178' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5395_96470-120545' '(q6rhr6|dmi1_medtr : 1018.0) Putative ion channel DMI-1 (Does not make infections protein 1) - Medicago truncatula (Barrel medic) & (at5g49960 : 992.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1012 (InterPro:IPR010420); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1012) (TAIR:AT5G02940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1984.0) & (original description: Putative At5g49960, Description = Probable ion channel POLLUX, PFAM = PF06241)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5397_48017-54649' '(at1g21350 : 315.0) Thioredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|48518 : 227.0) no description available & (reliability: 630.0) & (original description: Putative bcp, Description = Alkyl hydroperoxide reductase, PFAM = PF08534)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5402_55166-58211' '(at5g66600 : 212.0) Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT2G23700.1). & (gnl|cdd|68359 : 140.0) no description available & (reliability: 424.0) & (original description: Putative At2g23700, Description = BnaA04g13840D protein, PFAM = PF04784)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5402_138829-141290' '(at2g23690 : 150.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37240.1); Has 243 Blast hits to 243 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative , Description = , PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5409_47616-55537' '(at5g66470 : 461.0) RNA binding;GTP binding; FUNCTIONS IN: RNA binding, GTP binding; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 2 (InterPro:IPR004044), K Homology, prokaryotic type (InterPro:IPR009019), Small GTP-binding protein (InterPro:IPR005225), GTP1/OBG (InterPro:IPR006073), GTP-binding protein Era (InterPro:IPR005662), GTP-binding protein, HSR1-related (InterPro:IPR002917), K homology-like, alpha/beta (InterPro:IPR015946); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT1G30960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80503 : 347.0) no description available & (gnl|cdd|36637 : 320.0) no description available & (reliability: 922.0) & (original description: Putative era, Description = GTPase Era, PFAM = PF07650;PF01926)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5416_7861-19601' '(at2g45000 : 334.0) EMBRYO DEFECTIVE 2766 (EMB2766); FUNCTIONS IN: structural constituent of nuclear pore; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, nuclear pore; CONTAINS InterPro DOMAIN/s: Nucleoporin, Nsp1-like, C-terminal (InterPro:IPR007758); Has 235342 Blast hits to 95277 proteins in 3388 species: Archae - 819; Bacteria - 58190; Metazoa - 65863; Fungi - 46438; Plants - 10106; Viruses - 2707; Other Eukaryotes - 51219 (source: NCBI BLink). & (gnl|cdd|37407 : 90.9) no description available & (reliability: 668.0) & (original description: Putative NbNup62b, Description = Nuclear pore complex protein Nup62b, PFAM = PF05064)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5416_129560-135511' '(at2g16070 : 199.0) An integral outer envelope membrane protein (its homolog in A thaliana PDV1), component of the plastid division machinery. Similar to ARC6, PDV2 localizes to a continuous ring at the division site in wild-type plants. PDV1 and PDV2 are required for localization of ARC5 at the chloroplast division site.; PLASTID DIVISION2 (PDV2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: plastid fission; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: plastid division1 (TAIR:AT5G53280.1); Has 92 Blast hits to 92 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 86; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative PDV2, Description = Plastid division protein PDV2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5435_22442-28229' '(at5g51040 : 173.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF339 (InterPro:IPR005631). & (gnl|cdd|38536 : 111.0) no description available & (reliability: 346.0) & (original description: Putative SDHAF2, Description = (+)-neomenthol dehydrogenase, PFAM = PF03937)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5435_143749-146448' '(at5g07330 : 111.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G63060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative BnaC09g48550D, Description = BnaC09g48550D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5461_8871-14801' ' no hits & (original description: Putative PGSC0003DMG400015687, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF00560;PF13516)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5485_112114-115063' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5489_169003-176605' ' no hits & (original description: Putative PGSC0003DMG400027948, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5498_3695-12016' '(at3g51130 : 665.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0183 (InterPro:IPR005373); Has 269 Blast hits to 265 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 82; Plants - 37; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|67302 : 484.0) no description available & (gnl|cdd|38030 : 447.0) no description available & (reliability: 1330.0) & (original description: Putative glysoja_003176, Description = UPF0183 protein, PFAM = PF03676;PF03676)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5503_90124-92528' ' (original description: Putative , Description = , PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5508_278-2637' ' (original description: Putative RT, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5521_127045-131659' '(at5g47090 : 234.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2052, coiled-coil (InterPro:IPR018613); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38254 : 116.0) no description available & (reliability: 468.0) & (original description: Putative At5g47090, Description = AT5g47090/K14A3_4, PFAM = PF09747)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5554_74321-78110' ' no hits & (original description: Putative Os07g0657600, Description = Os07g0657600 protein, PFAM = PF00730)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5563_131648-137458' ' (original description: Putative Dif54, Description = Extensin-like protein Dif54, PFAM = PF01190;PF04554)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5563_134241-137314' ' (original description: Putative BnaA07g31240D, Description = BnaA07g31240D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5570_114753-124267' '(at1g33410 : 244.0) SUPPRESSOR OF AUXIN RESISTANCE1 (SAR1); INVOLVED IN: mRNA export from nucleus, response to auxin stimulus, developmental process; LOCATED IN: nuclear membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoporin Nup120/160 (InterPro:IPR021717). & (gnl|cdd|39721 : 92.8) no description available & (reliability: 488.0) & (original description: Putative , Description = , PFAM = PF11715)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5571_56031-58432' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5629_94786-99429' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5638_59328-61690' ' no hits & (original description: Putative rx, Description = Resistance protein PSH-RGH6, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5640_106285-108670' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5648_91768-94166' ' (original description: Putative orf2, Description = Retrovirus-related Pol polyprotein from transposon 17.6, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5671_94980-97975' ' no hits & (original description: Putative NAC2, Description = NAC transcription factor, PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5679_35890-47893' ' no hits & (original description: Putative BnaC01g25020D, Description = BnaC01g25020D protein, PFAM = PF15938)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5703_40996-44033' ' no hits & (original description: Putative NbARP, Description = ROX1 homologue, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5714_119022-133416' '(at5g40520 : 200.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; Has 3696 Blast hits to 2485 proteins in 391 species: Archae - 10; Bacteria - 571; Metazoa - 1013; Fungi - 530; Plants - 217; Viruses - 74; Other Eukaryotes - 1281 (source: NCBI BLink). & (reliability: 400.0) & (original description: Putative PGSC0003DMG400026917, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5744_12679-15137' ' no hits & (original description: Putative , Description = RT, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5771_20681-23636' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5780_42051-43716' '(at3g22510 : 112.0) Pre-rRNA-processing protein TSR2, conserved region; CONTAINS InterPro DOMAIN/s: Pre-rRNA-processing protein TSR2, conserved region (InterPro:IPR019398); BEST Arabidopsis thaliana protein match is: Pre-rRNA-processing protein TSR2, conserved region (TAIR:AT5G27990.1); Has 206 Blast hits to 206 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 55; Fungi - 70; Plants - 52; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative At3g22510, Description = At3g22510, PFAM = PF10273)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5783_78745-106220' '(at4g26410 : 219.0) Uncharacterised conserved protein UCP022280; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022280 (InterPro:IPR016803); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP022280 (TAIR:AT2G45060.1); Has 79 Blast hits to 79 proteins in 22 species: Archae - 3; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 72; Viruses - 1; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative At4g26410, Description = Putative uncharacterized protein At4g26410, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5796_34958-42154' '(at3g62580 : 311.0) Late embryogenesis abundant protein (LEA) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: late embryogenesis abundant domain-containing protein / LEA domain-containing protein (TAIR:AT1G72100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38097 : 112.0) no description available & (reliability: 622.0) & (original description: Putative LEA, Description = Late embryogenesis abundant protein, PFAM = PF13664)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5810_44805-50002' '(at1g26470 : 96.3) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, H4/H2A histone acetyltransferase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CT20 (InterPro:IPR012423); Has 60 Blast hits to 60 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 2; Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative At1g26470, Description = Chromatin modification-related protein Eaf7, PFAM = PF07904)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5839_10339-23519' '(at4g08280 : 132.0) Thioredoxin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin like (InterPro:IPR008554), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative PGSC0003DMG400000918, Description = Glutaredoxin-like protein, PFAM = PF05768)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5850_6693-10927' '(at5g04320 : 86.3) Shugoshin C terminus; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: meiotic chromosome segregation; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Shugoshin, C-terminal (InterPro:IPR011515); BEST Arabidopsis thaliana protein match is: Shugoshin C terminus (TAIR:AT3G10440.1); Has 2871 Blast hits to 2420 proteins in 372 species: Archae - 12; Bacteria - 318; Metazoa - 1409; Fungi - 181; Plants - 120; Viruses - 4; Other Eukaryotes - 827 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative BnaA10g25920D, Description = BnaA10g25920D protein, PFAM = PF07557)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5857_70783-73761' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5871_121445-123801' ' no hits & (original description: Putative PGSC0003DMG400025347, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5883_35464-42815' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5893_59662-62551' ' no hits & (original description: Putative AGG2, Description = Heterotrimeric G-protein gamma subunit 2, PFAM = PF00631)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5894_110929-158515' ' no hits & (original description: Putative CRR3, Description = Chlororespiratory reduction 3, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5903_94736-104036' ' no hits & (original description: Putative Tgt1ORF2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5909_114537-121225' ' no hits & (original description: Putative Os08g0526400, Description = Os08g0526400 protein, PFAM = PF05627;PF05627)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5910_115581-118568' ' no hits & (original description: Putative At3g04500, Description = RNA-binding protein 42, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5922_120892-123642' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5922_121027-125172' ' no hits & (original description: Putative , Description = , PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5927_23057-25644' ' no hits & (original description: Putative PGSC0003DMG400041916, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5933_58700-69228' '(at3g59780 : 385.0) Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: calcium sensing receptor (TAIR:AT5G23060.1); Has 1153 Blast hits to 413 proteins in 144 species: Archae - 0; Bacteria - 338; Metazoa - 73; Fungi - 101; Plants - 75; Viruses - 6; Other Eukaryotes - 560 (source: NCBI BLink). & (reliability: 770.0) & (original description: Putative glysoja_025196, Description = Rhodanese/cell cycle control phosphatase superfamily protein, PFAM = PF00581)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5950_111073-123978' '(gnl|cdd|69222 : 580.0) no description available & (at2g45830 : 543.0) downstream target of AGL15 2 (DTA2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: stem, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF821) (TAIR:AT3G61270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37669 : 533.0) no description available & (reliability: 1086.0) & (original description: Putative BnaC08g31240D, Description = BnaC08g31240D protein, PFAM = PF05686)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5955_60903-67803' '(at5g01350 : 82.4) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative PGSC0003DMG400011024, Description = BnaC03g00310D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5964_60203-65407' '(at5g52370 : 123.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative BnaC09g34310D, Description = BnaC09g34310D protein, PFAM = PF16053)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold5998_76666-85722' '(at1g55170 : 194.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 13439 Blast hits to 8993 proteins in 828 species: Archae - 344; Bacteria - 1469; Metazoa - 6958; Fungi - 1008; Plants - 683; Viruses - 29; Other Eukaryotes - 2948 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative BnaA06g00500D, Description = BnaA06g00500D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6011_36571-41738' '(at1g52780 : 1043.0) Protein of unknown function (DUF2921); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: cultured cell, callus, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2921 (InterPro:IPR021319); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF2921) (TAIR:AT4G21700.1); Has 114 Blast hits to 99 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 2086.0) & (original description: Putative Sb03g004080, Description = Putative uncharacterized protein Sb03g004080, PFAM = PF11145)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6024_5997-19303' '(at1g51560 : 526.0) Pyridoxamine 5'-phosphate oxidase family protein; FUNCTIONS IN: FMN binding; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: FMN-binding split barrel (InterPro:IPR012349), Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain (InterPro:IPR011576), FMN-binding split barrel, related (InterPro:IPR009002); BEST Arabidopsis thaliana protein match is: Pyridoxamine 5'-phosphate oxidase family protein (TAIR:AT3G21140.1); Has 633 Blast hits to 633 proteins in 219 species: Archae - 0; Bacteria - 353; Metazoa - 24; Fungi - 0; Plants - 140; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). & (reliability: 1052.0) & (original description: Putative BnaC06g08870D, Description = BnaC06g08870D protein, PFAM = PF13883)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6024_33506-37779' ' no hits & (original description: Putative PGSC0003DMG400016410, Description = , PFAM = PF05699)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6025_74663-81140' ' no hits & (original description: Putative PGSC0003DMG400003494, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6059_104172-106804' ' no hits & (original description: Putative str246N, Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6062_24324-29738' '(at1g27210 : 341.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G59850.1); Has 516 Blast hits to 439 proteins in 115 species: Archae - 2; Bacteria - 40; Metazoa - 93; Fungi - 74; Plants - 195; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (reliability: 682.0) & (original description: Putative BnaC05g19370D, Description = BnaC05g19370D protein, PFAM = PF02985;PF12765)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6067_1800-39413' '(at3g12590 : 1352.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 50 Blast hits to 41 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 2704.0) & (original description: Putative BnaC01g38520D, Description = BnaC01g38520D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6086_35327-37763' ' no hits & (original description: Putative PGSC0003DMG400045727, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6095_103080-118623' '(at5g20190 : 153.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G80130.1); Has 458 Blast hits to 304 proteins in 39 species: Archae - 0; Bacteria - 85; Metazoa - 7; Fungi - 10; Plants - 317; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative At1g80130, Description = Tetratricopeptide repeat-like superfamily protein, putative isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6102_21677-44111' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6139_11941-14246' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6154_102417-113089' '(at1g28380 : 769.0) This gene is predicted to encode a protein involved in negatively regulating salicylic acid-related defense responses and cell death programs. nsl1 mutants develop necrotic lesions spontaneously and show other features of a defense response, such as higher levels of SA and disease resistance-related transcripts, in the absence of a biotic stimulus. The NSL1 protein is predicted to have a MACPF domain, found in proteins that form a transmembrane pore in mammalian immune responses. NSL1 transcript levels do not appear to change in response to biotic stresses, but are elevated by cycloheximide in seedlings, and by sodium chloride in roots.; necrotic spotted lesions 1 (NSL1); CONTAINS InterPro DOMAIN/s: Membrane attack complex component/perforin (MACPF) domain (InterPro:IPR020864); BEST Arabidopsis thaliana protein match is: MAC/Perforin domain-containing protein (TAIR:AT4G24290.2); Has 203 Blast hits to 202 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 202; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1538.0) & (original description: Putative NSL1, Description = MACPF domain-containing protein NSL1, PFAM = PF01823)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6186_85265-90715' '(at4g14385 : 122.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf6 (InterPro:IPR015418); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72755 : 96.4) no description available & (reliability: 244.0) & (original description: Putative PGSC0003DMG400017224, Description = Histone acetyltransferase subunit NuA4-domain containing protein, PFAM = PF09340)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6205_29982-33712' ' no hits & (original description: Putative PGSC0003DMG400021604, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6254_96076-98378' ' no hits & (original description: Putative PGSC0003DMG400022295, Description = , PFAM = PF14368)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6260_2072-5451' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6279_95929-99797' ' (original description: Putative rTeg1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF00665)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6288_33920-109590' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6311_97597-100721' ' no hits & (original description: Putative PNP1, Description = Chloroplast polyribonucleotide nucleotidyltransferase, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6312_28930-39391' '(at3g07660 : 100.0) Kinase-related protein of unknown function (DUF1296); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1296 (InterPro:IPR009719); BEST Arabidopsis thaliana protein match is: Kinase-related protein of unknown function (DUF1296) (TAIR:AT3G13990.1); Has 3086 Blast hits to 1914 proteins in 327 species: Archae - 2; Bacteria - 372; Metazoa - 1089; Fungi - 466; Plants - 245; Viruses - 13; Other Eukaryotes - 899 (source: NCBI BLink). & (gnl|cdd|70439 : 97.4) no description available & (reliability: 200.0) & (original description: Putative At3g13990, Description = AT3g13990/MDC16_11, PFAM = PF06972)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6338_13031-18928' '(at5g65960 : 372.0) GTP binding; FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial Rho-like (InterPro:IPR013684), Alpha/gamma-adaptin-binding protein p34 (InterPro:IPR019341); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39474 : 337.0) no description available & (reliability: 744.0) & (original description: Putative At5g65960, Description = GTP binding protein, PFAM = PF00071;PF10199)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6349_33008-36197' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6355_40274-42795' '(at4g35690 : 97.8) Arabidopsis protein of unknown function (DUF241); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT4G35710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66742 : 87.7) no description available & (reliability: 195.6) & (original description: Putative PGSC0003DMG400001539, Description = , PFAM = PF03087)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6388_44139-50391' ' (original description: Putative Sb10g007500, Description = Putative uncharacterized protein Sb10g007500, PFAM = PF00150)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6403_80269-82580' ' no hits & (original description: Putative , Description = , PFAM = PF05919)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6410_88109-98268' '(at1g26110 : 128.0) Encodes Decapping 5, required for mRNA decapping, P-body formation and translational repression during postembryonic development.; decapping 5 (DCP5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: negative regulation of translation, deadenylation-independent decapping of nuclear-transcribed mRNA, cytoplasmic mRNA processing body assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DFDF motif (InterPro:IPR019050), FFD/TFG box motif (InterPro:IPR019053); BEST Arabidopsis thaliana protein match is: decapping 5-like (TAIR:AT5G45330.1); Has 14874 Blast hits to 10327 proteins in 603 species: Archae - 12; Bacteria - 902; Metazoa - 6418; Fungi - 2978; Plants - 1226; Viruses - 261; Other Eukaryotes - 3077 (source: NCBI BLink). & (gnl|cdd|36290 : 124.0) no description available & (gnl|cdd|29723 : 116.0) no description available & (reliability: 256.0) & (original description: Putative sum2, Description = Like-Sm ribonucleoprotein (LSM)-related domain protein, PFAM = PF09532;PF12701)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6432_8614-19368' ' no hits & (original description: Putative PGSC0003DMG400040160, Description = C2H2 type zf-zinc-finger protein, PFAM = PF12874;PF12874)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6433_2342-100743' ' no hits & (original description: Putative , Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6438_28410-30935' '(gnl|cdd|71349 : 107.0) no description available & (at1g72510 : 92.0) Protein of unknown function (DUF1677); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1677, plant (InterPro:IPR012876); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1677) (TAIR:AT2G09970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative BnaA02g05020D, Description = BnaA02g05020D protein, PFAM = PF07911)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6516_25237-28778' ' no hits & (original description: Putative PGSC0003DMG400014129, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6524_5610-9085' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6548_29306-31476' ' no hits & (original description: Putative RT, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6548_29312-31575' ' (original description: Putative RT, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6556_13081-18188' ' no hits & (original description: Putative , Description = , PFAM = PF14826;PF14826)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6586_8634-11854' '(at1g58120 : 207.0) BEST Arabidopsis thaliana protein match is: methyltransferases (TAIR:AT5G01710.1); Has 93 Blast hits to 93 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative T18I24.4, Description = Putative uncharacterized protein T18I24.4, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6588_89108-96663' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6596_60509-62808' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6597_14236-16390' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6611_1-3421' ' no hits & (original description: Putative , Description = , PFAM = PF00646)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6625_75236-121362' ' no hits & (original description: Putative PGSC0003DMG400018462, Description = NBS-coding resistance gene analog, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6636_66209-85996' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6641_82117-95468' ' (original description: Putative PLDZ, Description = Phospholipase D Z, PFAM = PF13091)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6649_56704-59795' ' no hits & (original description: Putative NbARP, Description = Putative ROX1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6660_22892-27843' '(at5g66090 : 206.0) unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative PGSC0003DMG400003653, Description = Universal stress family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6661_74221-88237' '(at2g30695 : 157.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative At2g30695, Description = At2g30700/T11J7.9, PFAM = PF05697)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6663_28991-34227' '(at1g15060 : 410.0) Uncharacterised conserved protein UCP031088, alpha/beta hydrolase; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase, At1g15070 (InterPro:IPR016969), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase (TAIR:AT1G73750.1); Has 177 Blast hits to 156 proteins in 44 species: Archae - 2; Bacteria - 72; Metazoa - 2; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 820.0) & (original description: Putative PGSC0003DMG400026880, Description = Alpha/beta fold hydrolase, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6676_4191-19450' '(at5g17910 : 278.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29620.1). & (reliability: 556.0) & (original description: Putative PGSC0003DMG400019177, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6676_4683-19480' '(at5g17910 : 283.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29620.1). & (reliability: 566.0) & (original description: Putative At2g29620, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6698_16622-20547' '(at2g41120 : 122.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF309 (InterPro:IPR005500); Has 349 Blast hits to 349 proteins in 112 species: Archae - 2; Bacteria - 189; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative , Description = , PFAM = PF03745)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6709_63483-66890' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6721_9108-14922' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6730_70508-73100' ' no hits & (original description: Putative PGSC0003DMG400019084, Description = Putative ovule protein, PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6731_80000-82420' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6732_36755-40346' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6761_22007-24654' '(at5g41960 : 143.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative PGSC0003DMG400012122, Description = At5g41960, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6761_68945-76839' '(at1g36990 : 258.0) unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in 339 species: Archae - 2; Bacteria - 1372; Metazoa - 990; Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes - 1593 (source: NCBI BLink). & (reliability: 516.0) & (original description: Putative TCM_035014, Description = C-jun-amino-terminal kinase-interacting protein 3, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6767_15495-19604' '(at2g16460 : 146.0) Protein of unknown function (DUF1640); FUNCTIONS IN: metal ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1640 (InterPro:IPR012439); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1640) (TAIR:AT3G51090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38366 : 103.0) no description available & (gnl|cdd|71238 : 81.1) no description available & (reliability: 292.0) & (original description: Putative At2g16460, Description = FMP32-like protein, PFAM = PF07798)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6772_2233-6184' '(at1g06660 : 172.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30820.2); Has 166 Blast hits to 144 proteins in 35 species: Archae - 0; Bacteria - 17; Metazoa - 13; Fungi - 20; Plants - 104; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative TCM_001947, Description = Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, putative isoform 3, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6785_47003-49890' '(at5g59350 : 85.9) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative PGSC0003DMG400023425, Description = Putative uncharacterized protein Sb05g027610, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6785_51264-53767' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6810_1-2462' '(at1g14345 : 220.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); Has 297 Blast hits to 297 proteins in 86 species: Archae - 0; Bacteria - 121; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative rnpA, Description = NAD(P)-linked oxidoreductase-like protein, PFAM = PF03703)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6833_23337-25771' ' (original description: Putative corC, Description = Lipid transfer protein, PFAM = PF14547)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6856_26755-36303' '(at5g03880 : 370.0) Thioredoxin family protein; FUNCTIONS IN: electron carrier activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin active site (InterPro:IPR011767), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin family protein (TAIR:AT4G10000.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|48590 : 123.0) no description available & (reliability: 740.0) & (original description: Putative gst, Description = Glutathione S-transferase, N-terminal domain protein, PFAM = PF13417;PF13417)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6866_44531-47023' ' no hits & (original description: Putative glysoja_037639, Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = PF13650)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6882_18798-21649' ' no hits & (original description: Putative At2g04670, Description = DNA/RNA polymerases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6901_81222-88422' '(at2g34380 : 330.0) Putative adipose-regulatory protein (Seipin); CONTAINS InterPro DOMAIN/s: Adipose-regulatory protein, Seipin (InterPro:IPR009617); BEST Arabidopsis thaliana protein match is: Putative adipose-regulatory protein (Seipin) (TAIR:AT1G29760.1); Has 254 Blast hits to 249 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 27; Plants - 76; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|39401 : 207.0) no description available & (gnl|cdd|87152 : 183.0) no description available & (reliability: 660.0) & (original description: Putative SEI2, Description = Seipin-2, PFAM = PF06775)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6912_1-6394' '(at5g21140 : 283.0) embryo defective 1379 (emb1379); CONTAINS InterPro DOMAIN/s: Nse1 non-SMC component of SMC5-6 complex (InterPro:IPR011513), Zinc finger, RING-like (InterPro:IPR014857); Has 255 Blast hits to 254 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 91; Fungi - 105; Plants - 49; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|87312 : 118.0) no description available & (reliability: 566.0) & (original description: Putative emb1379, Description = At5g21140, PFAM = PF07574;PF07574;PF08746)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6928_3475-6194' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6941_31664-46011' '(at5g16210 : 1372.0) HEAT repeat-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), LisH dimerisation motif (InterPro:IPR006594), Armadillo-type fold (InterPro:IPR016024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35432 : 232.0) no description available & (reliability: 2744.0) & (original description: Putative BnaC02g06440D, Description = BnaC02g06440D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6952_80426-84117' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6967_49108-51894' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold6974_11703-58751' ' no hits & (original description: Putative PGSC0003DMG401032203, Description = Cysteine-rich extensin-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7014_35030-37569' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7031_43020-51919' '(at5g03795 : 571.0) Exostosin family protein; LOCATED IN: membrane; EXPRESSED IN: embryo, sepal, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT3G07620.1); Has 1413 Blast hits to 1401 proteins in 109 species: Archae - 0; Bacteria - 9; Metazoa - 310; Fungi - 4; Plants - 989; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (gnl|cdd|36239 : 301.0) no description available & (gnl|cdd|66673 : 196.0) no description available & (reliability: 1142.0) & (original description: Putative At5g20260, Description = Probable glycosyltransferase At5g20260, PFAM = PF03016)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7048_5700-45841' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7121_57668-60072' ' no hits & (original description: Putative orf136, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7149_1550-8356' '(at3g04470 : 774.0) Ankyrin repeat family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Protein of unknown function DUF3424 (InterPro:IPR021832), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT1G04780.1); Has 1133 Blast hits to 894 proteins in 124 species: Archae - 0; Bacteria - 10; Metazoa - 597; Fungi - 29; Plants - 361; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|35742 : 478.0) no description available & (reliability: 1548.0) & (original description: Putative BnaC09g02820D, Description = BnaC09g02820D protein, PFAM = PF11904)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7181_3097-5799' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7182_3262-14074' ' (original description: Putative glysoja_019328, Description = Quinohemoprotein ethanol dehydrogenase type-1, PFAM = PF13360;PF13360;PF01011)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7185_40289-42978' '(at2g31600 : 114.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative PGSC0003DMG401016399, Description = BnaA10g03890D protein, PFAM = PF13891)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7221_66466-72045' '(at5g48500 : 94.4) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative F383_27938, Description = Atp-dependent rna helicase dbp7, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7257_15538-18188' ' (original description: Putative CSD, Description = Glycine-rich protein 2b, PFAM = PF00313;PF00098;PF00098)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7283_44945-48384' '(gnl|cdd|68427 : 229.0) no description available & (at2g31160 : 214.0) LIGHT SENSITIVE HYPOCOTYLS 3 (LSH3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT1G07090.1); Has 309 Blast hits to 309 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative ELE, Description = Protein ELONGATED EMPTY GLUME, PFAM = PF04852)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7297_31827-56031' '(at2g02410 : 371.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF901 (InterPro:IPR010298). & (gnl|cdd|69511 : 174.0) no description available & (reliability: 742.0) & (original description: Putative LOC100217107, Description = Expressed protein (With alternative splicing), PFAM = PF05991)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7344_50066-65608' ' no hits & (original description: Putative Dif54, Description = BnaA07g31240D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7348_24691-30938' '(at1g29050 : 339.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 38 (TBL38); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 37 (TAIR:AT2G34070.1); Has 1347 Blast hits to 1329 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1344; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|72785 : 162.0) no description available & (reliability: 678.0) & (original description: Putative gal2, Description = Alpha galactosidase, PFAM = PF14416;PF13839;PF13839)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7359_34271-38122' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7372_57218-60961' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7373_46961-55948' '(at4g36210 : 657.0) Protein of unknown function (DUF726); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF726 (InterPro:IPR007941); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF726) (TAIR:AT2G18100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37596 : 559.0) no description available & (gnl|cdd|68835 : 275.0) no description available & (reliability: 1314.0) & (original description: Putative BnaC01g02410D, Description = BnaC01g02410D protein, PFAM = PF05277)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7423_18948-20642' ' no hits & (original description: Putative orf222, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7429_42408-44821' ' no hits & (original description: Putative orf122, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7448_58921-61464' ' (original description: Putative SN2, Description = Snakin-2, PFAM = PF02704)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7502_1751-16934' '(at3g59800 : 131.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G43795.2); Has 15361 Blast hits to 8061 proteins in 537 species: Archae - 2; Bacteria - 622; Metazoa - 7561; Fungi - 1246; Plants - 920; Viruses - 49; Other Eukaryotes - 4961 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative B9008, Description = Calcium-binding EF-hand, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7535_49707-52066' ' no hits & (original description: Putative , Description = Gag-pol protein, putative, PFAM = PF03732)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7542_23789-26184' ' no hits & (original description: Putative , Description = Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7613_41632-45485' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7623_48634-51788' '(at1g79060 : 148.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56020.1); Has 3399 Blast hits to 980 proteins in 195 species: Archae - 0; Bacteria - 839; Metazoa - 390; Fungi - 256; Plants - 154; Viruses - 9; Other Eukaryotes - 1751 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7624_34509-48985' '(at5g09995 : 213.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative BnaC09g46710D, Description = BnaC09g46710D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7646_49872-56008' '(at2g19090 : 448.0) Protein of unknown function (DUF630 and DUF632); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT4G30130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68357 : 346.0) no description available & (reliability: 896.0) & (original description: Putative glysoja_013217, Description = DUF630 family protein, PFAM = PF04782;PF04783)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7656_45640-53081' '(at2g14110 : 282.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; CONTAINS InterPro DOMAIN/s: HAD-superfamily phosphatase, subfamily IIIC (InterPro:IPR010033), NLI interacting factor (InterPro:IPR004274); Has 332 Blast hits to 325 proteins in 144 species: Archae - 0; Bacteria - 33; Metazoa - 65; Fungi - 121; Plants - 76; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|39749 : 136.0) no description available & (reliability: 564.0) & (original description: Putative pco127416b, Description = Magnesium-dependent phosphatase 1, PFAM = PF12689;PF12689)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7661_3609-8189' '(at1g55790 : 200.0) FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Copper transport protein family (TAIR:AT3G20180.1). & (gnl|cdd|39376 : 189.0) no description available & (reliability: 400.0) & (original description: Putative Sb02g027770, Description = Putative uncharacterized protein Sb02g027770, PFAM = PF10354)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7671_45159-47527' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7681_18247-33178' '(at4g31880 : 299.0) LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1). & (gnl|cdd|36738 : 160.0) no description available & (reliability: 598.0) & (original description: Putative At1g15940, Description = Sister chromatid cohesion PDS5-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7742_46509-53474' ' no hits & (original description: Putative Sb04g007690, Description = Putative uncharacterized protein Sb04g007690, PFAM = PF15346)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7760_46035-47983' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7832_20706-24614' ' (original description: Putative , Description = Formin-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7839_2251-7521' '(at3g19900 : 229.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3067 (InterPro:IPR021420); Has 276 Blast hits to 276 proteins in 83 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 2; Plants - 59; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative BnaA05g19280D, Description = BnaA05g19280D protein, PFAM = PF11267)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7884_54511-56346' '(at1g28540 : 95.5) unknown protein; Has 25 Blast hits to 25 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 191.0) & (original description: Putative Sb10g020430, Description = Putative uncharacterized protein Sb10g020430, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7947_46024-49212' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold7986_23705-25833' ' no hits & (original description: Putative , Description = Cysteine-rich RLK (RECEPTOR-like protein kinase) 8, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold8001_26771-40089' '(gnl|cdd|86287 : 423.0) no description available & (at1g68390 : 394.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT1G68380.1); Has 622 Blast hits to 618 proteins in 34 species: Archae - 0; Bacteria - 10; Metazoa - 12; Fungi - 1; Plants - 563; Viruses - 9; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 788.0) & (original description: Putative Sb01g009220, Description = Putative uncharacterized protein Sb01g009220, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold8029_41523-44302' '(at5g53670 : 94.7) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative TER1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold8219_1908-26257' '(at4g22758 : 103.0) unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G27830.1). & (reliability: 206.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold8223_6049-13810' '(at5g19860 : 170.0) Protein of unknown function, DUF538; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT1G55265.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86647 : 103.0) no description available & (reliability: 340.0) & (original description: Putative BnaA10g15350D, Description = BnaA10g15350D protein, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold8295_1027-9388' '(gnl|cdd|71335 : 193.0) no description available & (at1g13740 : 169.0) Encodes a member of a small plant-specific gene family whose members interact with ABI5 and appear to be involved in mediating stress responses. AFP2 mutants affect a number of ABA mediated processes such as germination and response to osmotic and sugar stress. AFP2 nuclear localization is stress dependent.; ABI five binding protein 2 (AFP2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1675 (InterPro:IPR012463); BEST Arabidopsis thaliana protein match is: ABI five binding protein (TAIR:AT1G69260.1); Has 207 Blast hits to 201 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 6; Plants - 185; Viruses - 3; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative AFP1, Description = Ninja-family protein AFP1, PFAM = PF16136;PF07897;PF16135)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold8295_5901-9340' ' (original description: Putative AFP2, Description = Ninja-family protein AFP2, PFAM = PF16136;PF07897)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold8302_7371-10864' ' no hits & (original description: Putative PGSC0003DMG400014614, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold8309_34056-36446' '(at5g46850 : 107.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: endomembrane system, endoplasmic reticulum membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PIG-X/PBN1 (InterPro:IPR013233). & (reliability: 214.0) & (original description: Putative At5g46850, Description = Phosphatidylinositol-glycan biosynthesis class X protein, PFAM = PF08320)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold8321_26659-40588' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold8348_34249-37121' ' no hits & (original description: Putative PGSC0003DMG400013677, Description = , PFAM = PF00403)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold8355_40230-42748' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold8355_40278-42757' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold8371_32513-42770' '(at4g14950 : 593.0) SNARE associated Golgi protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36325 : 344.0) no description available & (reliability: 1186.0) & (original description: Putative KMS1, Description = Vacuole membrane protein KMS1, PFAM = PF09335)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold8464_33378-36373' ' (original description: Putative NAC2, Description = NAC transcription factor, PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold8476_11899-21925' '(at4g20350 : 293.0) oxidoreductases; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123). & (gnl|cdd|38410 : 251.0) no description available & (reliability: 586.0) & (original description: Putative ALKB6, Description = Alkylated DNA repair protein alkB homolog 6, PFAM = PF13532)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold8517_14406-21580' '(at1g70770 : 454.0) Protein of unknown function DUF2359, transmembrane; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endoplasmic reticulum, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2359, transmembrane (InterPro:IPR019308); BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF2359, transmembrane (TAIR:AT1G23170.2). & (gnl|cdd|39668 : 373.0) no description available & (reliability: 908.0) & (original description: Putative BnaC06g31910D, Description = BnaC06g31910D protein, PFAM = PF10151)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold8568_20296-36268' '(at3g05760 : 192.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, double-stranded RNA binding (InterPro:IPR022755). & (gnl|cdd|39925 : 158.0) no description available & (reliability: 384.0) & (original description: Putative ZMAT2, Description = Zinc finger matrin-type protein 2, PFAM = PF12874)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold8741_6569-12542' ' no hits & (original description: Putative PGSC0003DMG400025830, Description = Putative ovule protein, PFAM = PF02362)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold8747_30604-33017' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold8856_15666-18801' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold8875_10420-30379' ' no hits & (original description: Putative , Description = Dihydroflavonol-4-reductase, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold8943_12926-15577' ' no hits & (original description: Putative orf107d, Description = ORF61c, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold8990_24269-26994' '(at3g12410 : 95.1) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G12460.1); Has 208 Blast hits to 196 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 197; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|39574 : 87.8) no description available & (reliability: 190.2) & (original description: Putative PGSC0003DMG400012475, Description = Werner Syndrome-like exonuclease, PFAM = PF01612)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold9051_7424-12806' ' (original description: Putative BnaA07g31240D, Description = BnaA07g31240D protein, PFAM = PF01190)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold9051_7697-12901' ' no hits & (original description: Putative BnaA07g31240D, Description = BnaA07g31240D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold9140_3756-24725' '(at5g62550 : 115.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; Has 14949 Blast hits to 9947 proteins in 971 species: Archae - 43; Bacteria - 3248; Metazoa - 4424; Fungi - 1542; Plants - 562; Viruses - 55; Other Eukaryotes - 5075 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative TCM_013867, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold9177_1839-4243' ' no hits & (original description: Putative PGSC0003DMG400001172, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold9268_1-1781' ' no hits & (original description: Putative PGSC0003DMG400013098, Description = Putative TMV resistance protein N-like, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold9378_1118-6892' ' (original description: Putative PGSC0003DMG400000002, Description = Putative vacuolar iron transporter 1.1-like, PFAM = PF01988)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold9503_10185-14469' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold9510_14865-17691' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold9826_5037-7960' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold9879_695-3388' ' no hits & (original description: Putative PGSC0003DMG400006281, Description = Putative myb-like protein X-like, PFAM = PF11360)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold9898_1302-3580' '(at1g31175 : 90.1) unknown protein; Has 20 Blast hits to 20 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold9929_477-6401' ' no hits & (original description: Putative PGSC0003DMG400006487, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold9959_1385-6569' '(at1g73885 : 137.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; Has 37 Blast hits to 37 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative At1g73885, Description = At1g73885, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold10332_5605-8489' '(at5g12010 : 592.0) unknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39785 : 231.0) no description available & (reliability: 1184.0) & (original description: Putative At5g12010, Description = AT5g12010/F14F18_180, PFAM = PF13359)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold10337_5731-8267' ' no hits & (original description: Putative GDU2, Description = Protein GLUTAMINE DUMPER 2, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold10360_5553-8302' ' no hits & (original description: Putative , Description = , PFAM = PF13963)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold10500_1-7192' '(at5g47490 : 827.0) RGPR-related; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: RGPR-related (TAIR:AT5G47480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37124 : 352.0) no description available & (reliability: 1654.0) & (original description: Putative SEC16B, Description = Protein transport protein SEC16B homolog, PFAM = PF12932;PF12931)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold10557_329-2902' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold10945_1-1520' ' no hits & (original description: Putative , Description = , PFAM = PF13963)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold11056_1-4348' '(at4g29400 : 350.0) Protein of unknown function (DUF3531); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3531 (InterPro:IPR021920); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3531) (TAIR:AT5G08400.2); Has 315 Blast hits to 315 proteins in 83 species: Archae - 0; Bacteria - 120; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 700.0) & (original description: Putative F383_09136, Description = Dna-directed rna polymerase i subunit rpa2, PFAM = PF12049)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold11090_2228-4443' ' no hits & (original description: Putative , Description = , PFAM = PF10950)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold16037_1-1785' '(at3g53630 : 140.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18692.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative PGSC0003DMG400008931, Description = BnaC04g27080D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold18425_1-1568' ' no hits & (original description: Putative WAP, Description = Putative WPP domain-associated protein-like, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold19538_1-1495' ' (original description: Putative , Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold20187_1-1460' ' no hits & (original description: Putative , Description = , PFAM = PF12854;PF13041)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold22636_1-1328' '(at1g67790 : 214.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01680.1); Has 208 Blast hits to 125 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative , Description = , PFAM = PF14577)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold23975_171-1270' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold24046_1-1266' '(at5g03230 : 82.4) Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT5G60680.1); Has 326 Blast hits to 326 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 324; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68105 : 82.4) no description available & (reliability: 164.8) & (original description: Putative , Description = , PFAM = PF04520)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold26154_1-1185' '(at1g53400 : 123.0) Ubiquitin domain-containing protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Ubiquitin domain-containing protein (TAIR:AT5G45740.1); Has 319 Blast hits to 318 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 63; Plants - 89; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|35237 : 102.0) no description available & (reliability: 246.0) & (original description: Putative At1g53400, Description = AT1G53400 protein, PFAM = PF16455)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold26292_1-1180' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold33463_1-980' ' (original description: Putative rTeg1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold37848_1-894' ' no hits & (original description: Putative At2g06320, Description = Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold43112_1-813' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold53635_1-659' ' no hits & (original description: Putative , Description = DNA-directed RNA polymerase subunit, PFAM = )' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold88631_1-436' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'nbv0.5scaffold125098_1-243' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044ctg23145909_1-202' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044ctg23166781_1-204' ' no hits & (original description: Putative , Description = AGC kinase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044ctg23977157_1-311' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044ctg24078379_1-335' ' no hits & (original description: Putative rt, Description = Reverse transcriptase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044ctg24220173_1-373' ' no hits & (original description: Putative cad5, Description = NAD-dependent mannitol dehydrogenase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044ctg24338678_1-411' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044ctg24671442_1-560' ' no hits & (original description: Putative , Description = Reverse transcriptase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044ctg24841238_1-668' ' no hits & (original description: Putative FGENESH1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044ctg25629201_283-1793' ' no hits & (original description: Putative PRP1, Description = PRP1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044ctg25768054_557-2207' ' (original description: Putative hyp1, Description = 36.4 kDa proline-rich protein, PFAM = PF14547)' T '35.2' 'not assigned.unknown' 'niben044ctg25888885_1-1586' ' no hits & (original description: Putative PGSC0003DMG400015495, Description = , PFAM = PF00257)' T '35.2' 'not assigned.unknown' 'niben044ctg26025589_1-1246' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044ctg26045227_678-3896' ' no hits & (original description: Putative EN124, Description = Transcription factor bHLH52, PFAM = PF00010)' T '35.2' 'not assigned.unknown' 'niben044ctg26195568_1273-6147' '(at5g44250 : 378.0) Protein of unknown function DUF829, transmembrane 53; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF829, transmembrane 53 (InterPro:IPR008547); BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF829, transmembrane 53 (TAIR:AT2G15695.1); Has 92 Blast hits to 92 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 2; Plants - 70; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|37732 : 140.0) no description available & (gnl|cdd|69240 : 131.0) no description available & (reliability: 756.0) & (original description: Putative At5g44250, Description = At5g44250, PFAM = PF05705)' T '35.2' 'not assigned.unknown' 'niben044scf00000004ctg002_1-2168' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00000014ctg032_16547-21623' '(at1g24310 : 124.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; Has 2922 Blast hits to 2454 proteins in 263 species: Archae - 0; Bacteria - 57; Metazoa - 1043; Fungi - 654; Plants - 388; Viruses - 11; Other Eukaryotes - 769 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative NUP54, Description = Nuclear pore complex protein NUP54, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00000017ctg003_9-2386' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00000049ctg000_7201-13820' '(at1g65000 : 115.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38060.1); Has 49 Blast hits to 49 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00000052ctg010_13174-14705' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00000092ctg003_6699-8413' ' (original description: Putative At2g05610, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00000139ctg011_257-3435' ' no hits & (original description: Putative PGSC0003DMG400020472, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00000141ctg000_20839-22069' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00000173ctg001_6231-15873' ' (original description: Putative murC, Description = UDP-N-acetylmuramate--L-alanine ligase, PFAM = PF01225;PF08245;PF02875)' T '35.2' 'not assigned.unknown' 'niben044scf00000177ctg006_4876-8679' ' no hits & (original description: Putative PTS, Description = PETROSELINUM, PFAM = PF03791)' T '35.2' 'not assigned.unknown' 'niben044scf00000202ctg003_1-1133' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Retrovirus-related Pol polyprotein LINE-1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00000205ctg011_1-3555' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00000217ctg005_7571-9699' ' no hits & (original description: Putative , Description = DNA/RNA polymerases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00000259ctg006_1-1878' ' (original description: Putative glysoja_030340, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF07727)' T '35.2' 'not assigned.unknown' 'niben044scf00000260ctg001_1-4579' '(at5g54540 : 94.4) Uncharacterised conserved protein (UCP012943); CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP012943 (InterPro:IPR016606); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative MTR_4g081550, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00000264ctg002_40497-49080' '(at1g73470 : 246.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 492.0) & (original description: Putative Sb02g026190, Description = Putative uncharacterized protein Sb02g026190, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00000270ctg006_14380-18775' ' (original description: Putative ppo, Description = Polyphenol oxidase, PFAM = PF12143;PF00264;PF12142)' T '35.2' 'not assigned.unknown' 'niben044scf00000274ctg013_683-2391' ' (original description: Putative CPL4, Description = Carboxy-terminal domain phosphatase-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00000289ctg021_175-7714' ' (original description: Putative PGSC0003DMG400012634, Description = Predicted protein, PFAM = PF03023)' T '35.2' 'not assigned.unknown' 'niben044scf00000295ctg005_13132-16688' ' (original description: Putative PGSC0003DMG400000002, Description = Putative vacuolar iron transporter 1.1-like, PFAM = PF01988)' T '35.2' 'not assigned.unknown' 'niben044scf00000297ctg013_1-2757' '(at2g26530 : 80.5) unknown function; AR781; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT2G15760.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|71256 : 80.2) no description available & (reliability: 161.0) & (original description: Putative PGSC0003DMG400007993, Description = Pheromone receptor-like protein, PFAM = PF07816)' T '35.2' 'not assigned.unknown' 'niben044scf00000312ctg003_13385-36264' '(at1g24706 : 1254.0) Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.; THO2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: THO complex, subunitTHOC2, C-region (InterPro:IPR021418), THO complex, subunitTHOC2, N-region (InterPro:IPR021726). & (gnl|cdd|37085 : 504.0) no description available & (reliability: 2508.0) & (original description: Putative THO2, Description = THO complex subunit 2, PFAM = PF11262;PF11732)' T '35.2' 'not assigned.unknown' 'niben044scf00000370ctg007_1-502' ' (original description: Putative PGSC0003DMG400017078, Description = Putative ovule protein, PFAM = PF04937)' T '35.2' 'not assigned.unknown' 'niben044scf00000371ctg002_1-6218' '(at4g16144 : 409.0) Encodes AMSH3, a deubiquitinating enzyme that hydrolyzes K48- and K63-linked ubiquitin chains in vitro. Required for intracellular trafficking and vacuole biogenesis.; associated molecule with the SH3 domain of STAM 3 (AMSH3); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: associated molecule with the SH3 domain of STAM 1 (TAIR:AT1G48790.1); Has 901 Blast hits to 707 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 373; Fungi - 228; Plants - 224; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|38091 : 190.0) no description available & (reliability: 818.0) & (original description: Putative AMSH3, Description = AMSH-like ubiquitin thioesterase 3, PFAM = PF08969)' T '35.2' 'not assigned.unknown' 'niben044scf00000403ctg004_1-2023' '(at3g57940 : 114.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1726 (InterPro:IPR013562), Domain of unknown function DUF699, exodeoxyribonuclease V alpha chain (InterPro:IPR007807); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF1726) ;Putative ATPase (DUF699) (TAIR:AT1G10490.1). & (gnl|cdd|37247 : 90.8) no description available & (reliability: 228.0) & (original description: Putative At1g10490, Description = UPF0202 protein, PFAM = PF13725)' T '35.2' 'not assigned.unknown' 'niben044scf00000418ctg008_672-3569' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00000434ctg001_7864-15672' '(at3g27930 : 584.0) unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages. & (reliability: 1168.0) & (original description: Putative At3g27930, Description = AT3g27930/K24A2_2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00000487ctg007_1-301' ' (original description: Putative RT, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00000505ctg002_1-1085' ' no hits & (original description: Putative LecRK, Description = Clade XI lectin receptor kinase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00000507ctg001_2984-5765' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00000514ctg028_1-5470' '(at4g32140 : 181.0) EamA-like transporter family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: EamA-like transporter family (TAIR:AT3G07080.1); Has 1581 Blast hits to 1581 proteins in 473 species: Archae - 40; Bacteria - 583; Metazoa - 277; Fungi - 235; Plants - 87; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink). & (gnl|cdd|37976 : 146.0) no description available & (reliability: 362.0) & (original description: Putative At4g32140, Description = EamA-like transporter family isoform 1, PFAM = PF00892)' T '35.2' 'not assigned.unknown' 'niben044scf00000516ctg011_1-2017' ' (original description: Putative RT, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00000520ctg000_1-3792' '(at4g14590 : 481.0) embryo defective 2739 (emb2739); CONTAINS InterPro DOMAIN/s: Integrator complex, subunit 3 (InterPro:IPR019333); Has 179 Blast hits to 170 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|39463 : 276.0) no description available & (reliability: 962.0) & (original description: Putative INTS3, Description = Integrator complex subunit 3, PFAM = PF10189)' T '35.2' 'not assigned.unknown' 'niben044scf00000523ctg012_2039-10635' '(at4g21720 : 128.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, sepal, male gametophyte, root, flower; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage. & (reliability: 256.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00000524ctg002_6535-8566' ' no hits & (original description: Putative orf144, Description = Orf144, PFAM = PF01348)' T '35.2' 'not assigned.unknown' 'niben044scf00000532ctg003_17997-20996' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00000558ctg012_1890-8389' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00000570ctg003_50938-54170' '(at2g45990 : 296.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 592.0) & (original description: Putative At2g45990, Description = AT2G45990 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00000608ctg000_1-1796' ' no hits & (original description: Putative PGSC0003DMG400006837, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00000610ctg001_7012-8340' ' no hits & (original description: Putative orf103b, Description = ABC transporter G family member 26, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00000643ctg010_8572-10877' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00000655ctg000_2483-6427' '(at2g33180 : 148.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative BnaC04g09630D, Description = BnaA04g19200D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00000679ctg010_1-1570' ' no hits & (original description: Putative MES11, Description = AtMES11, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00000696ctg020_17852-20642' ' no hits & (original description: Putative Os02g0530850, Description = OSJNBa0081G05.10 protein, PFAM = PF13963)' T '35.2' 'not assigned.unknown' 'niben044scf00000697ctg008_5000-7924' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00000710ctg001_24-3601' ' no hits & (original description: Putative Os02g0497700, Description = Putative G3BP-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00000715ctg007_1-1095' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00000715ctg056_1798-4223' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00000768ctg002_21710-23640' '(at2g43780 : 81.6) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30 Blast hits to 30 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative Sb09g026050, Description = Putative uncharacterized protein Sb09g026050, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00000773ctg008_1-1960' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Glutathione reductase, cytosolic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00000776ctg007_1-2462' '(at4g01080 : 274.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 26 (TBL26); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 25 (TAIR:AT1G01430.1); Has 1341 Blast hits to 1324 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1336; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|72785 : 155.0) no description available & (reliability: 548.0) & (original description: Putative AXY4, Description = Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein, PFAM = PF13839)' T '35.2' 'not assigned.unknown' 'niben044scf00000781ctg009_3676-7231' '(at5g16460 : 231.0) Putative adipose-regulatory protein (Seipin); CONTAINS InterPro DOMAIN/s: Adipose-regulatory protein, Seipin (InterPro:IPR009617); BEST Arabidopsis thaliana protein match is: Putative adipose-regulatory protein (Seipin) (TAIR:AT2G34380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87152 : 107.0) no description available & (gnl|cdd|39401 : 97.4) no description available & (reliability: 462.0) & (original description: Putative SEI1, Description = Seipin-1, PFAM = PF06775)' T '35.2' 'not assigned.unknown' 'niben044scf00000796ctg018_1-4310' '(at5g58410 : 699.0) HEAT/U-box domain-containing protein; FUNCTIONS IN: binding, zinc ion binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Armadillo-type fold (InterPro:IPR016024); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|34816 : 186.0) no description available & (reliability: 1398.0) & (original description: Putative v1g200094, Description = Predicted protein, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben044scf00000797ctg001_1-2305' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00000810ctg014_1827-5330' '(at4g29850 : 150.0) Eukaryotic protein of unknown function (DUF872); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0414, transmembrane (InterPro:IPR008590); BEST Arabidopsis thaliana protein match is: Eukaryotic protein of unknown function (DUF872) (TAIR:AT2G19350.1); Has 271 Blast hits to 271 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 167; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|39950 : 113.0) no description available & (reliability: 300.0) & (original description: Putative BnaA03g49810D, Description = BnaA03g49810D protein, PFAM = PF05915)' T '35.2' 'not assigned.unknown' 'niben044scf00000825ctg001_491-4606' '(at2g32910 : 150.0) DCD (Development and Cell Death) domain protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative , Description = , PFAM = PF10539)' T '35.2' 'not assigned.unknown' 'niben044scf00000831ctg021_1-2545' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00000844ctg040_1-13294' ' (original description: Putative CAC1, Description = Cysteine protease CP14, PFAM = PF00396)' T '35.2' 'not assigned.unknown' 'niben044scf00000869ctg007_1-3198' '(at5g12230 : 97.8) MED19A; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19480.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative MED19B, Description = Probable mediator of RNA polymerase II transcription subunit 19b, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00000900ctg013_370-4749' '(gnl|cdd|69095 : 231.0) no description available & (at1g61260 : 194.0) Protein of unknown function (DUF761); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF761) (TAIR:AT1G11220.1); Has 110 Blast hits to 108 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 108; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative CFE1, Description = Cotton fiber expressed protein 1, PFAM = PF14364;PF05553)' T '35.2' 'not assigned.unknown' 'niben044scf00000925ctg009_23907-27399' ' (original description: Putative pr10, Description = Pathogenesis-related protein PR10, PFAM = PF00407)' T '35.2' 'not assigned.unknown' 'niben044scf00000930ctg003_1427-3894' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00000939ctg006_17421-19808' ' no hits & (original description: Putative , Description = , PFAM = PF06839)' T '35.2' 'not assigned.unknown' 'niben044scf00000953ctg008_3197-10433' '(at2g37210 : 380.0) Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At5g11950.; lysine decarboxylase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: Putative lysine decarboxylase family protein (TAIR:AT3G53450.1). & (gnl|cdd|86394 : 195.0) no description available & (reliability: 760.0) & (original description: Putative LOG3, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3, PFAM = PF03641)' T '35.2' 'not assigned.unknown' 'niben044scf00000982ctg005_1-2875' '(at5g43680 : 128.0) unknown protein; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 256.0) & (original description: Putative At5g43680, Description = AT5g43680/MQO24_4, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00000987ctg004_5375-7031' ' no hits & (original description: Putative LTR3, Description = Putative polyprotein, PFAM = PF13976)' T '35.2' 'not assigned.unknown' 'niben044scf00000992ctg000_1-1264' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00001019ctg019_2457-3771' ' no hits & (original description: Putative PGSC0003DMG400011834, Description = FAD-dependent oxidoreductase family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00001039ctg002_2158-8764' '(at4g31400 : 273.0) Encodes CTF7, a homolog of the yeast CTF protein required for the formation of sister chromatid cohesion. Arabidopsis CTF7 is similar to Saccharomyces cerevisiae CTF7 in that it lacks an N-terminal extension, exhibits acetyltransferase activity, and can complement a yeast ctf7 temperature-sensitive mutation. Arabidopsis CTF7 is critical for female gametophyte and embryo development, but not for the establishment of mitotic cohesion during microgametogenesis or during endosperm development.; CTF7; FUNCTIONS IN: damaged DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: sister chromatid cohesion, embryo sac development, embryo development; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: DNA-repair protein, UmuC-like (InterPro:IPR001126); Has 328 Blast hits to 327 proteins in 141 species: Archae - 0; Bacteria - 2; Metazoa - 149; Fungi - 104; Plants - 43; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|38224 : 162.0) no description available & (reliability: 546.0) & (original description: Putative CTF7, Description = Protein CHROMOSOME TRANSMISSION FIDELITY 7, PFAM = PF13880;PF13878)' T '35.2' 'not assigned.unknown' 'niben044scf00001043ctg002_3740-5612' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00001056ctg011_1-4245' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00001107ctg010_9765-12606' ' no hits & (original description: Putative Ext1.2A, Description = Putative extensin, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00001107ctg018_11791-15282' ' no hits & (original description: Putative EXT3, Description = Extensin, PFAM = PF04554;PF04554)' T '35.2' 'not assigned.unknown' 'niben044scf00001149ctg030_6727-9132' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00001161ctg001_18803-21364' ' no hits & (original description: Putative MTR_5g061150, Description = Copia-like polyprotein/retrotransposon, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben044scf00001161ctg023_4487-7226' ' (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00001172ctg000_16482-21425' '(at5g41380 : 155.0) CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT1G63820.1); Has 1690 Blast hits to 1687 proteins in 111 species: Archae - 0; Bacteria - 2; Metazoa - 13; Fungi - 3; Plants - 1603; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative At5g41380, Description = CCT motif family protein, PFAM = PF06203)' T '35.2' 'not assigned.unknown' 'niben044scf00001201ctg005_1-2057' '(at4g22320 : 99.8) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55210.1). & (reliability: 199.6) & (original description: Putative BnaC07g37270D, Description = BnaC07g37270D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00001206ctg014_1-11445' '(at2g27900 : 746.0) CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38150 : 209.0) no description available & (reliability: 1492.0) & (original description: Putative , Description = , PFAM = PF10475)' T '35.2' 'not assigned.unknown' 'niben044scf00001216ctg006_11310-15532' ' no hits & (original description: Putative PGSC0003DMG400037565, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00001247ctg014_1-1550' ' no hits & (original description: Putative PGSC0003DMG401000617, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00001319ctg048_1-4822' '(at1g04390 : 378.0) BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); Has 143 Blast hits to 130 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 756.0) & (original description: Putative , Description = , PFAM = PF00651;PF00651)' T '35.2' 'not assigned.unknown' 'niben044scf00001328ctg001_10357-13439' ' no hits & (original description: Putative PGSC0003DMG400010154, Description = Putative ovule protein, PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben044scf00001336ctg008_1-1856' ' no hits & (original description: Putative , Description = Ran GTPase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00001338ctg005_28441-30598' ' no hits & (original description: Putative orf125g, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00001357ctg015_1-5645' '(at5g47490 : 645.0) RGPR-related; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: RGPR-related (TAIR:AT5G47480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37124 : 264.0) no description available & (reliability: 1290.0) & (original description: Putative BnaC09g20220D, Description = BnaC09g20220D protein, PFAM = PF12931)' T '35.2' 'not assigned.unknown' 'niben044scf00001369ctg002_1-2184' ' no hits & (original description: Putative , Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00001370ctg012_19247-26696' '(at3g47610 : 393.0) transcription regulators;zinc ion binding; FUNCTIONS IN: transcription regulator activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2HC5-type (InterPro:IPR009349); Has 342 Blast hits to 320 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 117; Plants - 38; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|38056 : 221.0) no description available & (gnl|cdd|69727 : 88.1) no description available & (reliability: 786.0) & (original description: Putative BnaC03g57060D, Description = BnaC03g57060D protein, PFAM = PF06221)' T '35.2' 'not assigned.unknown' 'niben044scf00001386ctg013_1-1179' ' no hits & (original description: Putative , Description = , PFAM = PF13961)' T '35.2' 'not assigned.unknown' 'niben044scf00001394ctg005_3365-7194' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00001412ctg009_754-5734' ' no hits & (original description: Putative PGSC0003DMG400011962, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00001464ctg016_1631-4708' '(at1g64870 : 162.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G45200.1); Has 99 Blast hits to 91 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative PGSC0003DMG400046394, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00001465ctg010_2945-9307' ' no hits & (original description: Putative , Description = Homer protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00001476ctg015_21532-24293' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00001481ctg003_1-6002' '(at3g56680 : 276.0) Single-stranded nucleic acid binding R3H protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Single-stranded nucleic acid binding R3H (InterPro:IPR001374); BEST Arabidopsis thaliana protein match is: Single-stranded nucleic acid binding R3H protein (TAIR:AT2G40960.1); Has 389 Blast hits to 389 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 196; Fungi - 53; Plants - 134; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|38164 : 173.0) no description available & (reliability: 552.0) & (original description: Putative At2g40960, Description = Expressed protein, PFAM = PF01424;PF12752)' T '35.2' 'not assigned.unknown' 'niben044scf00001513ctg003_32833-36896' '(at5g26760 : 218.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF408 (InterPro:IPR007308); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86568 : 108.0) no description available & (reliability: 436.0) & (original description: Putative At5g26760, Description = BnaA02g31490D protein, PFAM = PF04181)' T '35.2' 'not assigned.unknown' 'niben044scf00001521ctg017_1-3856' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00001552ctg006_8-2312' ' no hits & (original description: Putative oomtA, Description = O-methyltransferase, putative, PFAM = PF08100)' T '35.2' 'not assigned.unknown' 'niben044scf00001587ctg001_1350-4381' '(at5g57830 : 164.0) Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT4G30830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68159 : 102.0) no description available & (reliability: 328.0) & (original description: Putative MYOB7, Description = Zein-binding domain-containing protein, PFAM = PF04576)' T '35.2' 'not assigned.unknown' 'niben044scf00001592ctg015_16880-20233' ' no hits & (original description: Putative PGSC0003DMG400022257, Description = , PFAM = PF01277)' T '35.2' 'not assigned.unknown' 'niben044scf00001646ctg009_5983-8506' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00001658ctg003_3743-12781' ' (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00001669ctg005_1596-5725' '(at5g63000 : 277.0) Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); Has 40 Blast hits to 40 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|39808 : 168.0) no description available & (reliability: 554.0) & (original description: Putative BnaA06g22470D, Description = BnaA06g22470D protein, PFAM = PF02466)' T '35.2' 'not assigned.unknown' 'niben044scf00001689ctg017_1-3719' '(at5g59830 : 233.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13660.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative F383_01599, Description = N-lysine methyltransferase SETD8-A, PFAM = PF16135)' T '35.2' 'not assigned.unknown' 'niben044scf00001724ctg006_456-5233' '(at4g10300 : 174.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Protein of unknown function DUF861, cupin-3 (InterPro:IPR008579), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04300.1); Has 485 Blast hits to 485 proteins in 129 species: Archae - 0; Bacteria - 243; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (gnl|cdd|69424 : 96.1) no description available & (reliability: 348.0) & (original description: Putative F24G24.100, Description = At4g10300, PFAM = PF05899)' T '35.2' 'not assigned.unknown' 'niben044scf00001741ctg001_9-2373' ' no hits & (original description: Putative KAC1, Description = Geminivirus Rep-interacting motor protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00001743ctg014_7569-14157' '(at1g24160 : 101.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: guard cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70100.3). & (reliability: 202.0) & (original description: Putative At1g24160, Description = BnaA03g27340D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00001756ctg009_1-10687' '(at5g61450 : 498.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81332 : 100.0) no description available & (reliability: 996.0) & (original description: Putative At5g61450, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF13238)' T '35.2' 'not assigned.unknown' 'niben044scf00001771ctg001_1041-4198' ' no hits & (original description: Putative PGSC0003DMG400019282, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00001777ctg000_3089-13565' ' no hits & (original description: Putative PGSC0003DMG401015175, Description = Putative B3 domain-containing protein-like, PFAM = PF02362;PF02362)' T '35.2' 'not assigned.unknown' 'niben044scf00001780ctg018_7692-12100' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00001809ctg023_983-3471' ' no hits & (original description: Putative , Description = , PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben044scf00001822ctg010_1-1628' ' no hits & (original description: Putative , Description = , PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben044scf00001829ctg003_1-4202' ' no hits & (original description: Putative F383_10880, Description = Peptidyl-prolyl cis-trans isomerase cyp8, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00001834ctg003_1-13322' '(at2g34357 : 1141.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), Domain of unknown function, NUC173 (InterPro:IPR012978); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G23540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36462 : 540.0) no description available & (gnl|cdd|87454 : 206.0) no description available & (reliability: 2282.0) & (original description: Putative ZOSMA_202G00250, Description = Ribosomal RNA-processing protein 12, PFAM = PF08161)' T '35.2' 'not assigned.unknown' 'niben044scf00001857ctg001_13116-18775' '(at5g14370 : 103.0) CCT motif family protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT4G25990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative COL7, Description = CONSTANS-like 7, PFAM = PF06203)' T '35.2' 'not assigned.unknown' 'niben044scf00001869ctg000_4095-7258' '(at2g44200 : 154.0) CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor; CONTAINS InterPro DOMAIN/s: CBF1-interacting co-repressor CIR, N-terminal (InterPro:IPR019339), Pre-mRNA splicing factor (InterPro:IPR022209); BEST Arabidopsis thaliana protein match is: CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor (TAIR:AT2G44195.1); Has 59661 Blast hits to 33745 proteins in 1751 species: Archae - 130; Bacteria - 4372; Metazoa - 27826; Fungi - 6422; Plants - 3866; Viruses - 275; Other Eukaryotes - 16770 (source: NCBI BLink). & (gnl|cdd|39073 : 98.7) no description available & (reliability: 308.0) & (original description: Putative At2g44200, Description = Putative ovule protein, PFAM = PF10197;PF12542)' T '35.2' 'not assigned.unknown' 'niben044scf00001894ctg012_6344-9007' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00001908ctg013_112-8613' ' no hits & (original description: Putative At5g57345, Description = At5g57345, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00001931ctg005_7529-10201' ' no hits & (original description: Putative PGSC0003DMG400045123, Description = Zinc finger containing preotein, putative, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben044scf00001958ctg000_1-3844' ' no hits & (original description: Putative PGSC0003DMG400012536, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00001960ctg003_584-2143' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Retrovirus-related Pol polyprotein LINE-1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00001976ctg003_142-3755' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00001991ctg011_1-2691' ' no hits & (original description: Putative , Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00001997ctg001_1-3623' '(at3g29185 : 303.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF3598 (InterPro:IPR022017); Has 54 Blast hits to 54 proteins in 23 species: Archae - 0; Bacteria - 24; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 606.0) & (original description: Putative Os03g0758900, Description = Os03g0758900 protein, PFAM = PF12204)' T '35.2' 'not assigned.unknown' 'niben044scf00002007ctg015_9834-14233' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00002014ctg004_1-2100' ' no hits & (original description: Putative PGSC0003DMG400001172, Description = Putative ovule protein, PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben044scf00002028ctg012_11433-14017' '(at1g52140 : 129.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative , Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben044scf00002044ctg002_4486-7171' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00002048ctg000_32390-35055' '(at2g46150 : 187.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G64065.1); Has 262 Blast hits to 261 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 258; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative PGSC0003DMG400000069, Description = LEA2-2, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'niben044scf00002051ctg012_994-6350' '(at1g03900 : 306.0) member of NAP family, an heterogeneous subfamily of the ATP-binding Cassette (ABC) superfamily of membrane transporters. The NAPs proteins are characterized by having only one nucleotide-binding folds (NBFs) domain.; non-intrinsic ABC protein 4 (NAP4); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: extracellular transport; LOCATED IN: membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Adaptin ear-binding coat-associated protein 1 NECAP-1 (InterPro:IPR012466); BEST Arabidopsis thaliana protein match is: Adaptin ear-binding coat-associated protein 1 NECAP-1 (TAIR:AT3G58600.1); Has 448 Blast hits to 448 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 218; Fungi - 61; Plants - 115; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|37711 : 258.0) no description available & (gnl|cdd|87402 : 235.0) no description available & (reliability: 612.0) & (original description: Putative Necap2, Description = Adaptin ear-binding coat-associated protein 2, PFAM = PF07933)' T '35.2' 'not assigned.unknown' 'niben044scf00002068ctg003_12459-21233' '(at5g61910 : 152.0) DCD (Development and Cell Death) domain protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 membrane targeting protein (InterPro:IPR018029), Kelch related (InterPro:IPR013089), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Calcium-dependent phospholipid-binding Copine family protein (TAIR:AT5G61900.3). & (p37707|b2_dauca : 83.6) B2 protein - Daucus carota (Carrot) & (reliability: 304.0) & (original description: Putative , Description = DCD domain protein, putative isoform 1, PFAM = PF10539;PF10539)' T '35.2' 'not assigned.unknown' 'niben044scf00002089ctg006_6116-8017' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00002121ctg017_23716-26413' ' (original description: Putative rt, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00002167ctg000_1-4177' '(at1g29050 : 305.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 38 (TBL38); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 37 (TAIR:AT2G34070.1); Has 1347 Blast hits to 1329 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1344; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|72785 : 160.0) no description available & (reliability: 610.0) & (original description: Putative TBL41, Description = Protein trichome birefringence-like 41, PFAM = PF13839)' T '35.2' 'not assigned.unknown' 'niben044scf00002169ctg007_4487-7095' '(at5g38700 : 130.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02170.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative , Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben044scf00002181ctg006_4608-7121' ' (original description: Putative PGSC0003DMG400022081, Description = Arginine decarboxylase, PFAM = PF03711;PF01276)' T '35.2' 'not assigned.unknown' 'niben044scf00002181ctg007_21-3522' ' (original description: Putative ldcC, Description = Arginine decarboxylase, PFAM = PF01276)' T '35.2' 'not assigned.unknown' 'niben044scf00002224ctg019_2120-6030' '(at5g57460 : 724.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 166 Blast hits to 166 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 112; Fungi - 4; Plants - 36; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|37609 : 230.0) no description available & (reliability: 1448.0) & (original description: Putative At5g57460, Description = At5g57460, PFAM = PF10291)' T '35.2' 'not assigned.unknown' 'niben044scf00002241ctg012_1749-6637' '(gnl|cdd|69487 : 273.0) no description available & (at4g10360 : 256.0) TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT1G31300.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39761 : 151.0) no description available & (reliability: 512.0) & (original description: Putative At4g10360, Description = AT4G10360 protein, PFAM = PF03798)' T '35.2' 'not assigned.unknown' 'niben044scf00002241ctg020_11651-14651' '(at1g09575 : 287.0) Protein of unknown function (DUF607); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF607 (InterPro:IPR006769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF607) (TAIR:AT1G57610.2); Has 384 Blast hits to 384 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 56; Plants - 127; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|38177 : 227.0) no description available & (gnl|cdd|68256 : 209.0) no description available & (reliability: 574.0) & (original description: Putative At1g09575, Description = Calcium uniporter protein 6, mitochondrial, PFAM = PF04678)' T '35.2' 'not assigned.unknown' 'niben044scf00002249ctg015_69447-72679' ' no hits & (original description: Putative StHRGP, Description = BnaA07g31240D protein, PFAM = PF04554;PF04554;PF04554;PF04554;PF04554)' T '35.2' 'not assigned.unknown' 'niben044scf00002275ctg001_1-2278' '(at5g47920 : 107.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative , Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben044scf00002285ctg003_24176-38695' '(at4g14145 : 124.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative PGSC0003DMG400009070, Description = Os03g0288400 protein, PFAM = PF14138)' T '35.2' 'not assigned.unknown' 'niben044scf00002298ctg007_17140-21814' '(at5g64510 : 528.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1056.0) & (original description: Putative At5g64510, Description = Putative uncharacterized protein At5g64510, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00002306ctg011_1-2438' '(at5g16110 : 91.3) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00002311ctg007_3922-8849' '(at5g04320 : 91.3) Shugoshin C terminus; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: meiotic chromosome segregation; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Shugoshin, C-terminal (InterPro:IPR011515); BEST Arabidopsis thaliana protein match is: Shugoshin C terminus (TAIR:AT3G10440.1); Has 2871 Blast hits to 2420 proteins in 372 species: Archae - 12; Bacteria - 318; Metazoa - 1409; Fungi - 181; Plants - 120; Viruses - 4; Other Eukaryotes - 827 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative SGO1, Description = At5g04320, PFAM = PF07557)' T '35.2' 'not assigned.unknown' 'niben044scf00002312ctg011_21054-22197' ' no hits & (original description: Putative , Description = Putative gag-pol polyprotein, identical, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00002331ctg031_1174-4993' '(at5g54530 : 165.0) Protein of unknown function, DUF538; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT1G61667.1); Has 418 Blast hits to 418 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 418; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86647 : 116.0) no description available & (reliability: 330.0) & (original description: Putative At1g61667, Description = At1g61667, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben044scf00002396ctg004_1-2549' ' no hits & (original description: Putative , Description = , PFAM = PF10551;PF03108)' T '35.2' 'not assigned.unknown' 'niben044scf00002407ctg017_11500-21899' ' no hits & (original description: Putative WDL7, Description = TPX2 (Targeting protein for Xklp2) family protein, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'niben044scf00002420ctg006_2911-7654' ' no hits & (original description: Putative PIF1, Description = Transcription factor PIF1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00002458ctg029_7749-13490' '(at5g52950 : 375.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 750.0) & (original description: Putative PGSC0003DMG400006595, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00002458ctg029_23583-27812' '(at5g52960 : 177.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3143 (InterPro:IPR021489); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative F383_31895, Description = tRNA dimethylallyltransferase, PFAM = PF11341)' T '35.2' 'not assigned.unknown' 'niben044scf00002476ctg010_5595-7437' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00002487ctg004_993-6757' ' (original description: Putative Dif54, Description = BnaCnng70250D protein, PFAM = PF01190;PF04554)' T '35.2' 'not assigned.unknown' 'niben044scf00002488ctg003_1-4172' '(at3g04890 : 199.0) Uncharacterized conserved protein (DUF2358); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT2G46100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative F383_07323, Description = Adenine phosphoribosyltransferase 1, chloroplastic-like protein, PFAM = PF10184)' T '35.2' 'not assigned.unknown' 'niben044scf00002493ctg009_12692-14402' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben044scf00002494ctg001_1391-8971' '(at1g79915 : 291.0) Putative methyltransferase family protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); Has 424 Blast hits to 423 proteins in 116 species: Archae - 0; Bacteria - 1; Metazoa - 170; Fungi - 70; Plants - 129; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 582.0) & (original description: Putative At1g79915, Description = Putative methyltransferase family protein, PFAM = PF10294)' T '35.2' 'not assigned.unknown' 'niben044scf00002494ctg001_1915-9095' '(at1g79915 : 290.0) Putative methyltransferase family protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); Has 424 Blast hits to 423 proteins in 116 species: Archae - 0; Bacteria - 1; Metazoa - 170; Fungi - 70; Plants - 129; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 580.0) & (original description: Putative At1g79915, Description = Putative methyltransferase family protein, PFAM = PF10294)' T '35.2' 'not assigned.unknown' 'niben044scf00002494ctg001_8848-15535' '(at1g52320 : 573.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT5G25590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68357 : 308.0) no description available & (reliability: 1146.0) & (original description: Putative Sb02g006420, Description = Putative uncharacterized protein Sb02g006420, PFAM = PF04783;PF04782)' T '35.2' 'not assigned.unknown' 'niben044scf00002494ctg001_8988-15069' '(at1g52320 : 573.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT5G25590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68357 : 306.0) no description available & (reliability: 1146.0) & (original description: Putative F19K6.7, Description = BZIP protein, putative, PFAM = PF04782;PF04783)' T '35.2' 'not assigned.unknown' 'niben044scf00002497ctg029_1-4837' '(at3g17930 : 119.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3007 (InterPro:IPR021562); Has 236 Blast hits to 236 proteins in 83 species: Archae - 0; Bacteria - 117; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative CPLD38, Description = AT3g17930/MEB5_15, PFAM = PF11460)' T '35.2' 'not assigned.unknown' 'niben044scf00002590ctg013_2550-6070' ' no hits & (original description: Putative , Description = Kinesin light chain, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00002591ctg005_2861-6496' ' no hits & (original description: Putative , Description = , PFAM = PF09425)' T '35.2' 'not assigned.unknown' 'niben044scf00002603ctg003_8423-11432' '(at1g76070 : 84.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20310.1); Has 66 Blast hits to 66 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00002663ctg006_1-525' ' no hits & (original description: Putative , Description = , PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben044scf00002693ctg005_2582-5014' ' no hits & (original description: Putative PGSC0003DMG400001172, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00002715ctg010_1003-3825' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00002722ctg008_1903-8481' '(at1g80000 : 173.0) CASC3/Barentsz eIF4AIII binding; CONTAINS InterPro DOMAIN/s: CASC3/Barentsz eIF4AIII binding (InterPro:IPR018545); BEST Arabidopsis thaliana protein match is: CASC3/Barentsz eIF4AIII binding (TAIR:AT1G15280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative Os01g0595100, Description = Glycine-rich family protein, PFAM = PF09405)' T '35.2' 'not assigned.unknown' 'niben044scf00002733ctg005_16594-19636' '(at3g49055 : 97.1) unknown protein; EXPRESSED IN: cotyledon; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24560.1); Has 52205 Blast hits to 29376 proteins in 1994 species: Archae - 873; Bacteria - 6150; Metazoa - 27099; Fungi - 3784; Plants - 3062; Viruses - 130; Other Eukaryotes - 11107 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative BnaA06g16220D, Description = ATP binding protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00002744ctg011_1-9448' ' no hits & (original description: Putative SOC1, Description = AGAMOUS-like 14, PFAM = PF01486)' T '35.2' 'not assigned.unknown' 'niben044scf00002751ctg010_9374-12263' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00002772ctg015_9-2554' ' no hits & (original description: Putative , Description = , PFAM = PF03732)' T '35.2' 'not assigned.unknown' 'niben044scf00002787ctg011_18950-21454' '(at5g11030 : 98.2) alf4-1 prevents initiation of lateral roots. Cannot be rescued by IAA. Protein belongs to a plant-specific gene family and is localized to the nucleus.; ABERRANT LATERAL ROOT FORMATION 4 (ALF4); INVOLVED IN: lateral root morphogenesis; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, YAP/Alf4/glomulin (InterPro:IPR013877); Has 14 Blast hits to 14 proteins in 8 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative , Description = , PFAM = PF08568)' T '35.2' 'not assigned.unknown' 'niben044scf00002853ctg009_3219-6187' '(at5g03560 : 253.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: nucleobase:cation symporter activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G38150.2); Has 33122 Blast hits to 10382 proteins in 236 species: Archae - 3; Bacteria - 11; Metazoa - 102; Fungi - 213; Plants - 32082; Viruses - 0; Other Eukaryotes - 711 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative Os06g0308200, Description = Ribosomal protein L15, PFAM = PF01535;PF01535;PF13041)' T '35.2' 'not assigned.unknown' 'niben044scf00002889ctg002_14593-20454' '(at4g12680 : 598.0) unknown protein; INVOLVED IN: vegetative to reproductive phase transition of meristem; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40640.1); Has 103 Blast hits to 103 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1196.0) & (original description: Putative At3g27390, Description = Uncharacterized membrane protein At3g27390, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00002903ctg006_11279-14159' ' no hits & (original description: Putative PGSC0003DMG400007384, Description = EG45-like domain containing protein, PFAM = PF03330)' T '35.2' 'not assigned.unknown' 'niben044scf00002903ctg014_9381-12736' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00002913ctg000_9913-18608' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00002913ctg008_14-2539' ' (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00002917ctg010_5949-7268' ' no hits & (original description: Putative , Description = Zinc finger family protein, putative, PFAM = PF14369)' T '35.2' 'not assigned.unknown' 'niben044scf00002921ctg024_1-1376' ' no hits & (original description: Putative AHL1, Description = Putative DNA-binding protein ESCAROLA, PFAM = PF03479)' T '35.2' 'not assigned.unknown' 'niben044scf00002998ctg007_11191-12881' '(at2g28780 : 136.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF939, bacterial (InterPro:IPR010343); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09450.1); Has 671 Blast hits to 667 proteins in 305 species: Archae - 0; Bacteria - 588; Metazoa - 0; Fungi - 2; Plants - 66; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative PGSC0003DMG400038189, Description = BnaC04g15380D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003002ctg004_1-2367' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00003031ctg009_1-3152' ' (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00003050ctg000_1-2652' ' no hits & (original description: Putative , Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben044scf00003068ctg032_764-6744' ' (original description: Putative mdeA, Description = Methionine gamma-lyase, PFAM = PF06838)' T '35.2' 'not assigned.unknown' 'niben044scf00003078ctg001_16069-21946' '(at4g00585 : 133.0) unknown protein; Has 47 Blast hits to 47 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 7; Plants - 33; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative At4g00585, Description = Putative uncharacterized protein At4g00585, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003097ctg006_469-3221' '(at5g66440 : 113.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative PGSC0003DMG400022575, Description = TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003099ctg002_1-2247' '(at5g66440 : 90.1) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative PGSC0003DMG400000718, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003100ctg006_955-3539' '(gnl|cdd|68427 : 231.0) no description available & (at3g23290 : 222.0) LIGHT SENSITIVE HYPOCOTYLS 4 (LSH4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT2G31160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 444.0) & (original description: Putative ELE, Description = Protein ELONGATED EMPTY GLUME, PFAM = PF04852)' T '35.2' 'not assigned.unknown' 'niben044scf00003134ctg000_14497-19387' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00003158ctg002_9819-20509' ' (original description: Putative RT, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00003176ctg011_7699-10742' ' (original description: Putative SS6, Description = Starch synthase, chloroplastic/amyloplastic, PFAM = PF08323)' T '35.2' 'not assigned.unknown' 'niben044scf00003183ctg007_12370-17571' '(at5g27560 : 436.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1995 (InterPro:IPR018962); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87898 : 174.0) no description available & (reliability: 872.0) & (original description: Putative At5g27560, Description = Putative uncharacterized protein At5g27560, PFAM = PF09353)' T '35.2' 'not assigned.unknown' 'niben044scf00003215ctg002_14474-16803' '(at2g42310 : 136.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57785.1); Has 115 Blast hits to 115 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 44; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative At3g57785, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003231ctg000_6381-9395' ' no hits & (original description: Putative , Description = , PFAM = PF00031;PF00076)' T '35.2' 'not assigned.unknown' 'niben044scf00003245ctg016_6309-9662' ' no hits & (original description: Putative OsJ_15587, Description = OSJNBb0039L24.19 protein, PFAM = PF00403)' T '35.2' 'not assigned.unknown' 'niben044scf00003250ctg004_3886-6205' ' no hits & (original description: Putative orf114d, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003250ctg008_1-1736' '(atmg00030 : 95.1) hypothetical protein; unknown protein. & (reliability: 190.2) & (original description: Putative orf138c, Description = Uncharacterized mitochondrial protein AtMg00030, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003255ctg001_3221-6482' ' no hits & (original description: Putative PGSC0003DMG400027341, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003255ctg001_6143-9672' '(gnl|cdd|86676 : 103.0) no description available & (at1g80120 : 93.2) Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT3G15810.1); Has 439 Blast hits to 438 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 9; Plants - 430; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative Sb05g001420, Description = Putative uncharacterized protein Sb05g001420, PFAM = PF04525)' T '35.2' 'not assigned.unknown' 'niben044scf00003329ctg012_5184-7592' ' no hits & (original description: Putative , Description = Mutant gag-pol polyprotein, PFAM = PF03732)' T '35.2' 'not assigned.unknown' 'niben044scf00003359ctg007_1-3034' ' no hits & (original description: Putative PGSC0003DMG400025215, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003367ctg008_2290-4486' ' no hits & (original description: Putative PGSC0003DMG400026167, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003378ctg000_5833-8314' '(at4g13030 : 95.5) P-loop containing nucleoside triphosphate hydrolases superfamily protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 191.0) & (original description: Putative At4g13030, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003385ctg015_6801-9415' ' no hits & (original description: Putative At5g05365, Description = Heavy metal transport/detoxification superfamily protein, PFAM = PF00403)' T '35.2' 'not assigned.unknown' 'niben044scf00003407ctg014_6561-8266' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00003411ctg009_1021-3758' ' no hits & (original description: Putative At2g06320, Description = Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003411ctg009_1027-3791' ' no hits & (original description: Putative At2g06320, Description = Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003423ctg006_8819-16082' '(at4g23020 : 83.2) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11780.1). & (reliability: 166.4) & (original description: Putative PGSC0003DMG400022757, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003440ctg013_2244-4762' '(at2g20010 : 101.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT2G25800.1); Has 178 Blast hits to 167 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|69201 : 92.0) no description available & (reliability: 202.0) & (original description: Putative , Description = , PFAM = PF05664)' T '35.2' 'not assigned.unknown' 'niben044scf00003459ctg003_13005-16649' '(at5g62990 : 415.0) embryo defective 1692 (emb1692); CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant (InterPro:IPR021099); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein (TAIR:AT4G01037.1); Has 538 Blast hits to 532 proteins in 58 species: Archae - 0; Bacteria - 4; Metazoa - 48; Fungi - 18; Plants - 406; Viruses - 7; Other Eukaryotes - 55 (source: NCBI BLink). & (reliability: 830.0) & (original description: Putative emb1692, Description = Ubiquitin carboxyl-terminal hydrolase family protein, PFAM = PF11955)' T '35.2' 'not assigned.unknown' 'niben044scf00003466ctg001_3942-6753' ' no hits & (original description: Putative PGSC0003DMG400005632, Description = LysM domain GPI-anchored protein 1, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003508ctg001_1-3738' '(at3g13330 : 181.0) Encodes a protein that interacts with the 26S proteasome. Mutants are phenotypically indistinguishable from wild type plants under a variety of growth conditions. Protein levels increase upon exposure of seedlings to MG132, a specific, potent, reversible, and cell-permeable proteasome inhibitor.; proteasome activating protein 200 (PA200); FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3437 (InterPro:IPR021843), Armadillo-type fold (InterPro:IPR016024); Has 512 Blast hits to 355 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi - 262; Plants - 57; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|37062 : 86.6) no description available & (reliability: 362.0) & (original description: Putative PA200, Description = Proteasome activator complex subunit-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003511ctg012_23393-25892' ' (original description: Putative FIL1, Description = Stamen-specific protein FIL1, PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'niben044scf00003514ctg002_3880-6313' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00003528ctg001_5309-8073' ' no hits & (original description: Putative PGSC0003DMG401022285, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003534ctg001_25-3549' '(at1g67080 : 221.0) Encodes a protein involved in the photoprotection of PSII. An aba4-1 mutant completely lacks neoxanthin,a component of the chromophore of the peripheral antenna system in PSII. ABA4 is required for neoxanthin biosynthesis, an intermediary step in abscisic acid biosynthesis, but no catalytic activity has been detected for the ABA4 protein.; abscisic acid (ABA)-deficient 4 (ABA4); INVOLVED IN: abscisic acid biosynthetic process, regulation of superoxide anion generation, xanthophyll metabolic process, photoprotection; LOCATED IN: PSII associated light-harvesting complex II, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 723 Blast hits to 723 proteins in 64 species: Archae - 0; Bacteria - 78; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 587 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative NSY, Description = Neoxanthin synthase, PFAM = PF14108)' T '35.2' 'not assigned.unknown' 'niben044scf00003548ctg002_243-3573' '(at5g38200 : 162.0) Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: glutamine metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Peptidase C26 (InterPro:IPR011697), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT1G66860.1); Has 3533 Blast hits to 3529 proteins in 1172 species: Archae - 17; Bacteria - 2871; Metazoa - 1; Fungi - 3; Plants - 53; Viruses - 0; Other Eukaryotes - 588 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative At1g15040, Description = Class I glutamine amidotransferase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003561ctg015_1210-3831' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00003582ctg011_777-2563' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben044scf00003614ctg036_1-7747' '(at4g02030 : 494.0) Vps51/Vps67 family (components of vesicular transport) protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps51/Vps67 (InterPro:IPR014812). & (gnl|cdd|37557 : 237.0) no description available & (reliability: 988.0) & (original description: Putative cl754_1a, Description = Putative vacuolar protein sorting-associated protein 51-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003691ctg002_1-1779' ' no hits & (original description: Putative PGSC0003DMG400006811, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003699ctg002_2361-4893' ' no hits & (original description: Putative PGSC0003DMG400033658, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003709ctg009_7297-10190' ' (original description: Putative PGSC0003DMG400021845, Description = , PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'niben044scf00003731ctg013_1-2621' ' no hits & (original description: Putative , Description = Integrase core domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003763ctg000_1624-8824' '(at2g41600 : 171.0) Mitochondrial glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrial matrix; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: Mitochondrial glycoprotein family protein (TAIR:AT1G80720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative At2g41600, Description = Glycoprotein family protein, PFAM = PF02330)' T '35.2' 'not assigned.unknown' 'niben044scf00003765ctg000_6876-9780' '(gnl|cdd|39785 : 119.0) no description available & (at5g35695 : 101.0) CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative , Description = PIF-like transposase, PFAM = PF13359)' T '35.2' 'not assigned.unknown' 'niben044scf00003776ctg013_815-2134' ' no hits & (original description: Putative psbJ, Description = Photosystem II reaction center protein J, PFAM = PF01788)' T '35.2' 'not assigned.unknown' 'niben044scf00003783ctg022_1-2990' '(at2g30990 : 179.0) Protein of unknown function (DUF688); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF688) (TAIR:AT1G29240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68662 : 107.0) no description available & (reliability: 358.0) & (original description: Putative , Description = Transcription initiation factor TFIID subunit 11, putative, PFAM = PF05097)' T '35.2' 'not assigned.unknown' 'niben044scf00003788ctg010_465-2929' ' no hits & (original description: Putative , Description = , PFAM = PF03732)' T '35.2' 'not assigned.unknown' 'niben044scf00003812ctg003_1-2108' '(at5g55570 : 121.0) unknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative BnaC09g53260D, Description = BnaC09g53260D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003823ctg026_2772-5494' '(at1g74160 : 223.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G18620.1); Has 3407 Blast hits to 2217 proteins in 314 species: Archae - 0; Bacteria - 264; Metazoa - 1296; Fungi - 318; Plants - 346; Viruses - 34; Other Eukaryotes - 1149 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative At1g74160, Description = Putative uncharacterized protein At1g74160, PFAM = PF14309)' T '35.2' 'not assigned.unknown' 'niben044scf00003832ctg062_21107-27210' '(at5g04670 : 397.0) Enhancer of polycomb-like transcription factor protein; CONTAINS InterPro DOMAIN/s: Enhancer of polycomb-like (InterPro:IPR019542); BEST Arabidopsis thaliana protein match is: Enhancer of polycomb-like transcription factor protein (TAIR:AT4G32620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 794.0) & (original description: Putative BnaC02g02630D, Description = Enhancer of polycomb-like protein, PFAM = PF10513)' T '35.2' 'not assigned.unknown' 'niben044scf00003864ctg013_6032-8529' ' no hits & (original description: Putative , Description = Zinc knuckle domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003872ctg029_21434-23465' ' no hits & (original description: Putative PGSC0003DMG400018491, Description = Growth-regulating factor 5, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003889ctg005_9996-12610' ' no hits & (original description: Putative Os04g0142700, Description = Os04g0142700 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003901ctg000_1800-5817' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00003933ctg002_13028-15929' ' no hits & (original description: Putative , Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben044scf00003939ctg021_1-36891' '(at3g12590 : 1069.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 50 Blast hits to 41 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 2138.0) & (original description: Putative F383_04478, Description = Integrin alpha-3, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003962ctg019_2044-5172' ' no hits & (original description: Putative si486078e04, Description = At5g13560, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00003971ctg001_1-1919' ' (original description: Putative At2g05080, Description = PIF1-like helicase, PFAM = PF05970)' T '35.2' 'not assigned.unknown' 'niben044scf00003988ctg002_9969-13648' '(at5g02580 : 91.7) Plant protein 1589 of unknown function; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476); BEST Arabidopsis thaliana protein match is: Plant protein 1589 of unknown function (TAIR:AT3G55240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative F383_28306, Description = Argininosuccinate lyase, PFAM = PF09713)' T '35.2' 'not assigned.unknown' 'niben044scf00003989ctg014_1-2974' ' no hits & (original description: Putative MGT1, Description = Magnesium transporter MRS2/LPE10, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00004010ctg010_7017-24059' '(at2g20310 : 113.0) Encodes RPM1 Interacting Protein 13 (RIN13), a resistance protein interactor shown to positively enhance resistance function of RPM1.; RPM1 interacting protein 13 (RIN13); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28690.1); Has 124 Blast hits to 118 proteins in 30 species: Archae - 2; Bacteria - 0; Metazoa - 13; Fungi - 2; Plants - 98; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative RIN13, Description = 28 kDa ribonucleoprotein, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00004032ctg002_3018-6321' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00004032ctg002_3593-6376' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Glutathione reductase, cytosolic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00004032ctg002_3600-6785' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Retrovirus-related Pol polyprotein LINE-1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00004042ctg006_1-6063' '(at5g41190 : 638.0) CONTAINS InterPro DOMAIN/s: Nin one binding (NOB1) Zn-ribbon like (InterPro:IPR014881), D-site 20S pre-rRNA nuclease (InterPro:IPR017117); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37674 : 200.0) no description available & (gnl|cdd|72196 : 110.0) no description available & (reliability: 1276.0) & (original description: Putative nob1, Description = RNA-binding protein NOB1, PFAM = PF08772;PF17146)' T '35.2' 'not assigned.unknown' 'niben044scf00004045ctg037_1165-3500' ' (original description: Putative RT, Description = Reverse transcriptase, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00004066ctg006_6983-10590' ' no hits & (original description: Putative , Description = Iron import ATP-binding/permease IrtA, PFAM = PF10258)' T '35.2' 'not assigned.unknown' 'niben044scf00004071ctg000_4557-8823' ' no hits & (original description: Putative MED8, Description = Mediator of RNA polymerase II transcription subunit 8, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00004071ctg001_1-5897' '(at2g03070 : 322.0) Encodes a subunit of the Mediator complex. Regulates plant defense and flowering.; mediator subunit 8 (MED8); Has 21670 Blast hits to 11104 proteins in 489 species: Archae - 4; Bacteria - 472; Metazoa - 8306; Fungi - 2813; Plants - 2364; Viruses - 51; Other Eukaryotes - 7660 (source: NCBI BLink). & (reliability: 644.0) & (original description: Putative MED8, Description = BnaC09g16070D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00004074ctg004_7251-12553' ' no hits & (original description: Putative , Description = , PFAM = PF08576)' T '35.2' 'not assigned.unknown' 'niben044scf00004087ctg000_1622-4425' ' (original description: Putative NBS390, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T '35.2' 'not assigned.unknown' 'niben044scf00004107ctg007_22283-24558' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00004109ctg001_24100-27531' ' no hits & (original description: Putative , Description = , PFAM = PF00646)' T '35.2' 'not assigned.unknown' 'niben044scf00004142ctg001_169-2695' ' no hits & (original description: Putative , Description = Integrase core domain containing protein, PFAM = PF16588)' T '35.2' 'not assigned.unknown' 'niben044scf00004157ctg001_1002-3628' '(at1g52140 : 110.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative , Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben044scf00004170ctg005_943-3391' ' no hits & (original description: Putative PGSC0003DMG400044598, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00004214ctg000_86-5588' '(at3g50910 : 130.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66480.1); Has 76 Blast hits to 75 proteins in 28 species: Archae - 0; Bacteria - 10; Metazoa - 7; Fungi - 2; Plants - 49; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative PGSC0003DMG400018228, Description = Os02g0704600 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00004219ctg017_1-4439' '(at3g51130 : 504.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0183 (InterPro:IPR005373); Has 269 Blast hits to 265 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 82; Plants - 37; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|67302 : 383.0) no description available & (gnl|cdd|38030 : 323.0) no description available & (reliability: 1008.0) & (original description: Putative PGSC0003DMG400003547, Description = UPF0183 protein, PFAM = PF03676)' T '35.2' 'not assigned.unknown' 'niben044scf00004226ctg007_5352-7441' ' no hits & (original description: Putative aly, Description = ALY protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00004240ctg005_7708-11401' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00004242ctg006_14213-17460' '(at1g58120 : 303.0) BEST Arabidopsis thaliana protein match is: methyltransferases (TAIR:AT5G01710.1); Has 93 Blast hits to 93 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 606.0) & (original description: Putative T18I24.4, Description = Putative uncharacterized protein T18I24.4, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00004251ctg001_1-2230' ' no hits & (original description: Putative Dof26, Description = Dof zinc finger protein DOF3.5, PFAM = PF02701)' T '35.2' 'not assigned.unknown' 'niben044scf00004252ctg003_2998-6427' '(at5g65120 : 80.1) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative , Description = DNA-directed RNA polymerase subunit beta, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00004265ctg005_922-3612' ' no hits & (original description: Putative PGSC0003DMG402013972, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00004274ctg006_1-1347' ' no hits & (original description: Putative , Description = Polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00004295ctg002_26727-29311' ' no hits & (original description: Putative orf143, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00004328ctg018_1-4777' '(at5g10010 : 145.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64910.1); Has 33260 Blast hits to 16857 proteins in 1270 species: Archae - 88; Bacteria - 3040; Metazoa - 11915; Fungi - 3137; Plants - 1371; Viruses - 424; Other Eukaryotes - 13285 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative At5g10010, Description = Myosin-H heavy chain, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00004340ctg011_1-2283' '(at1g79190 : 174.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 200 Blast hits to 184 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 76; Fungi - 76; Plants - 39; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00004362ctg000_98-7102' '(at4g32620 : 638.0) Enhancer of polycomb-like transcription factor protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tudor domain (InterPro:IPR002999), Enhancer of polycomb-like (InterPro:IPR019542); BEST Arabidopsis thaliana protein match is: Enhancer of polycomb-like transcription factor protein (TAIR:AT5G04670.1); Has 578 Blast hits to 531 proteins in 105 species: Archae - 0; Bacteria - 30; Metazoa - 78; Fungi - 45; Plants - 268; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (reliability: 1276.0) & (original description: Putative , Description = Enhancer of polycomb-like protein, PFAM = PF10513)' T '35.2' 'not assigned.unknown' 'niben044scf00004368ctg009_492-6293' ' no hits & (original description: Putative PGSC0003DMG400026019, Description = Phosphatidate cytidylyltransferase, PFAM = PF12874;PF12874)' T '35.2' 'not assigned.unknown' 'niben044scf00004388ctg036_10162-12232' ' no hits & (original description: Putative PGSC0003DMG400045123, Description = Putative ovule protein, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben044scf00004388ctg036_10225-12775' ' no hits & (original description: Putative , Description = , PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben044scf00004403ctg006_8570-10899' ' no hits & (original description: Putative Os07g0686300, Description = Zinc finger, C3HC4 type (RING finger) protein, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben044scf00004409ctg003_3358-6286' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00004414ctg015_7720-11405' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00004432ctg011_3673-11874' '(at5g06970 : 587.0) CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT4G11670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69201 : 429.0) no description available & (reliability: 1174.0) & (original description: Putative At5g06970, Description = AT5g06970/MOJ9_14, PFAM = PF05664)' T '35.2' 'not assigned.unknown' 'niben044scf00004437ctg007_73-1993' '(at1g25420 : 145.0) Regulator of Vps4 activity in the MVB pathway protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061); BEST Arabidopsis thaliana protein match is: Regulator of Vps4 activity in the MVB pathway protein (TAIR:AT1G34220.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37238 : 125.0) no description available & (reliability: 290.0) & (original description: Putative pco144644, Description = Regulator of Vps4 activity in the MVB pathway protein, PFAM = PF03398)' T '35.2' 'not assigned.unknown' 'niben044scf00004464ctg009_1062-3570' '(at1g13810 : 120.0) Restriction endonuclease, type II-like superfamily protein; FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: YqaJ viral recombinase family (InterPro:IPR019080), Exonuclease, phage-type/RecB, C-terminal (InterPro:IPR011604), Restriction endonuclease, type II-like (InterPro:IPR011335); BEST Arabidopsis thaliana protein match is: Restriction endonuclease, type II-like superfamily protein (TAIR:AT1G67660.1); Has 316 Blast hits to 315 proteins in 62 species: Archae - 0; Bacteria - 48; Metazoa - 55; Fungi - 0; Plants - 63; Viruses - 14; Other Eukaryotes - 136 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative At1g13810, Description = Exonuclease, phage-type/RecB, C-terminal, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00004468ctg010_8307-12493' '(at3g15095 : 148.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative hcf243, Description = Chloroplast protein HCF243, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00004470ctg000_48-3322' '(at5g48470 : 292.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 584.0) & (original description: Putative PGSC0003DMG400013943, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00004479ctg001_17671-21969' ' no hits & (original description: Putative PGSC0003DMG400010684, Description = Putative GATA transcription factor 28-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00004484ctg012_1-3087' ' no hits & (original description: Putative , Description = , PFAM = PF08513)' T '35.2' 'not assigned.unknown' 'niben044scf00004498ctg016_25226-32441' '(at3g47850 : 113.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; Has 57 Blast hits to 57 proteins in 32 species: Archae - 0; Bacteria - 5; Metazoa - 12; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative PGSC0003DMG400033064, Description = Os05g0220900 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00004500ctg017_1471-4101' ' (original description: Putative pol, Description = Reverse transcriptase, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00004550ctg005_46930-49815' '(at3g13980 : 110.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54200.1); Has 1485 Blast hits to 418 proteins in 98 species: Archae - 0; Bacteria - 6; Metazoa - 246; Fungi - 61; Plants - 107; Viruses - 6; Other Eukaryotes - 1059 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00004567ctg005_5788-8638' '(at1g79120 : 477.0) Ubiquitin carboxyl-terminal hydrolase family protein; CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant (InterPro:IPR021099); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein (TAIR:AT5G21970.1); Has 409 Blast hits to 404 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 409; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 954.0) & (original description: Putative TCM_032397, Description = Ubiquitin carboxyl-terminal hydrolase family protein isoform 1, PFAM = PF11955)' T '35.2' 'not assigned.unknown' 'niben044scf00004583ctg016_21010-23655' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00004624ctg002_803-3863' ' (original description: Putative RT, Description = Reverse transcriptase, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00004647ctg011_11977-14499' ' (original description: Putative LgRT3, Description = Reverse transcriptases, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00004652ctg021_6302-8937' ' no hits & (original description: Putative zfp1, Description = Zinc finger, C2H2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00004667ctg022_2358-5061' '(at5g52540 : 143.0) Protein of unknown function (DUF819); LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF819 (InterPro:IPR008537); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF819) (TAIR:AT5G24000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|69220 : 82.6) no description available & (reliability: 286.0) & (original description: Putative CPLD14, Description = Similarity to unknown protein, PFAM = PF05684)' T '35.2' 'not assigned.unknown' 'niben044scf00004675ctg009_5548-7775' ' no hits & (original description: Putative PGSC0003DMG400016865, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00004714ctg000_43426-45889' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00004755ctg003_1-2174' ' no hits & (original description: Putative , Description = DNA/RNA polymerases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00004766ctg016_240-3368' '(gnl|cdd|68298 : 190.0) no description available & (at1g62420 : 166.0) Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT1G12030.1); Has 389 Blast hits to 387 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 387; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative , Description = , PFAM = PF04720)' T '35.2' 'not assigned.unknown' 'niben044scf00004769ctg003_9244-12329' ' no hits & (original description: Putative glysoja_044022, Description = tRNA pseudouridine synthase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00004782ctg013_4203-6783' ' no hits & (original description: Putative EFTS, Description = CRIB domain-containing protein RIC1, PFAM = PF00786)' T '35.2' 'not assigned.unknown' 'niben044scf00004809ctg004_3246-8962' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00004890ctg001_12133-14111' ' no hits & (original description: Putative , Description = Zinc finger containing preotein, putative, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben044scf00004894ctg008_14519-16875' '(at1g50740 : 122.0) Transmembrane proteins 14C; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0136, Transmembrane (InterPro:IPR005349); BEST Arabidopsis thaliana protein match is: Transmembrane proteins 14C (TAIR:AT3G20510.1); Has 412 Blast hits to 412 proteins in 97 species: Archae - 0; Bacteria - 35; Metazoa - 172; Fungi - 4; Plants - 187; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|67275 : 93.4) no description available & (gnl|cdd|39468 : 92.7) no description available & (reliability: 244.0) & (original description: Putative Sb01g016440, Description = Putative uncharacterized protein Sb01g016440, PFAM = PF03647)' T '35.2' 'not assigned.unknown' 'niben044scf00004937ctg009_2348-6775' '(gnl|cdd|37778 : 125.0) no description available & (at3g07030 : 104.0) Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein (InterPro:IPR002775); BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein (TAIR:AT1G76010.1); Has 449 Blast hits to 441 proteins in 135 species: Archae - 3; Bacteria - 20; Metazoa - 178; Fungi - 24; Plants - 137; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative umc1204, Description = Alba-like protein C9orf23, PFAM = PF01918)' T '35.2' 'not assigned.unknown' 'niben044scf00005003ctg014_905-5165' '(at4g31330 : 286.0) Protein of unknown function, DUF599; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF599 (InterPro:IPR006747); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF599 (TAIR:AT5G10580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68233 : 203.0) no description available & (reliability: 572.0) & (original description: Putative BnaC09g45960D, Description = BnaC09g45960D protein, PFAM = PF04654)' T '35.2' 'not assigned.unknown' 'niben044scf00005009ctg004_520-3350' ' no hits & (original description: Putative myb18, Description = MYB transcription factor, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00005034ctg028_1909-5245' '(at2g39120 : 456.0) Ubiquitin carboxyl-terminal hydrolase family protein; LOCATED IN: mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant (InterPro:IPR021099); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein (TAIR:AT3G58520.1); Has 404 Blast hits to 398 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 404; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 912.0) & (original description: Putative At2g39120, Description = Group II intron splicing protein WTF9, PFAM = PF11955)' T '35.2' 'not assigned.unknown' 'niben044scf00005034ctg029_1-3736' ' no hits & (original description: Putative , Description = Ribosomal RNA small subunit methyltransferase A, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00005037ctg006_4012-6749' ' no hits & (original description: Putative PGSC0003DMG400036344, Description = Putative gag-pol, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'niben044scf00005070ctg012_291-4637' '(at2g47390 : 160.0) Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106); BEST Arabidopsis thaliana protein match is: acylaminoacyl-peptidase-related (TAIR:AT4G14570.1); Has 4880 Blast hits to 4877 proteins in 846 species: Archae - 179; Bacteria - 3027; Metazoa - 477; Fungi - 49; Plants - 145; Viruses - 0; Other Eukaryotes - 1003 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative GEP, Description = Putative glutamyl endopeptidase, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00005072ctg011_2860-5999' ' no hits & (original description: Putative , Description = Transposon MuDR mudrA-like protein, putative, PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'niben044scf00005085ctg014_8522-15541' '(at5g15880 : 263.0) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative BnaA03g05750D, Description = BnaA03g05750D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00005089ctg009_17228-19611' ' no hits & (original description: Putative PGSC0003DMG400015809, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00005096ctg032_6389-9568' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00005124ctg002_4271-6681' ' (original description: Putative RT, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00005129ctg013_4065-6517' '(gnl|cdd|70178 : 202.0) no description available & (at4g23720 : 158.0) Protein of unknown function (DUF1191); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1191 (InterPro:IPR010605); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1191) (TAIR:AT4G01140.1); Has 106 Blast hits to 106 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 106; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative glysoja_002862, Description = Putative ovule protein, PFAM = PF06697)' T '35.2' 'not assigned.unknown' 'niben044scf00005142ctg001_1-5413' '(at1g47720 : 156.0) Encodes an organellar single-strand DNA binding protein, located in mitochondria, controls the stoichiometry of alternative mitochondrial DNA forms generated by homologous recombination.; Organellar Single-stranded (OSB1); FUNCTIONS IN: single-stranded DNA binding; INVOLVED IN: negative regulation of DNA recombination, mitochondrial genome maintenance; LOCATED IN: mitochondrion, apoplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Primosome PriB/single-strand DNA-binding (InterPro:IPR000424); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 9 (TAIR:AT4G20010.2); Has 198 Blast hits to 122 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 197; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative OSB1, Description = Organellar single-stranded, PFAM = PF00436)' T '35.2' 'not assigned.unknown' 'niben044scf00005165ctg002_2340-5562' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00005167ctg002_1-2142' ' no hits & (original description: Putative , Description = , PFAM = PF08213)' T '35.2' 'not assigned.unknown' 'niben044scf00005167ctg013_6713-21682' '(at5g40740 : 861.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1722.0) & (original description: Putative 38930, Description = AUGMIN subunit 6, PFAM = PF14661)' T '35.2' 'not assigned.unknown' 'niben044scf00005182ctg000_1-1622' ' (original description: Putative sdh4, Description = Succinate dehydrogenase subunit 4, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00005187ctg003_3338-19544' '(at4g35760 : 339.0) Encodes a bimodular enzyme comprising an integral domain homologous to the catalytic subunit of mammalian vitamin K epoxide reductase (VKORC1, EC 1.1.4.1) that is fused to a soluble thioredoxin-like moiety. Using yeast microsomes as a recombinant system, it was shown that the VKORC1 domain of At4g35760 functions as a stringent naphthoquinone reductase, and that its reduced Trx-like partner can serve as its electron donor. Located in plastid.; NAD(P)H dehydrogenase (quinone)s; FUNCTIONS IN: NAD(P)H dehydrogenase (quinone) activity; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vitamin K epoxide reductase (InterPro:IPR012932), Thioredoxin-like fold (InterPro:IPR012336); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87393 : 100.0) no description available & (reliability: 678.0) & (original description: Putative LTO1, Description = Thiol-disulfide oxidoreductase LTO1, PFAM = PF07884)' T '35.2' 'not assigned.unknown' 'niben044scf00005204ctg002_7799-10699' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00005209ctg012_677-4324' ' no hits & (original description: Putative PGSC0003DMG400021755, Description = Putative E3 ubiquitin-protein ligase RBBP6-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00005230ctg003_2741-7800' '(at5g16300 : 924.0) Vps51/Vps67 family (components of vesicular transport) protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps51/Vps67 (InterPro:IPR014812). & (gnl|cdd|37244 : 487.0) no description available & (reliability: 1848.0) & (original description: Putative COG1, Description = Vps51/Vps67 family (Components of vesicular transport) protein, PFAM = PF08700)' T '35.2' 'not assigned.unknown' 'niben044scf00005268ctg019_16794-19046' ' no hits & (original description: Putative PGSC0003DMG400006509, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00005280ctg030_9985-13320' '(gnl|cdd|71235 : 148.0) no description available & (at5g22930 : 87.0) Protein of unknown function (DUF1635); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1635 (InterPro:IPR012862); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1635) (TAIR:AT3G44940.1); Has 97 Blast hits to 97 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative PGSC0003DMG400031075, Description = DUF1635 family protein, PFAM = PF07795)' T '35.2' 'not assigned.unknown' 'niben044scf00005284ctg022_942-9146' '(at5g47900 : 377.0) Protein of unknown function (DUF1624); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1624 (InterPro:IPR012429); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1624) (TAIR:AT5G27730.1). & (gnl|cdd|39881 : 334.0) no description available & (gnl|cdd|34021 : 125.0) no description available & (reliability: 754.0) & (original description: Putative Sb04g021400, Description = Putative uncharacterized protein Sb04g021400, PFAM = PF07786)' T '35.2' 'not assigned.unknown' 'niben044scf00005284ctg022_1027-9162' '(at5g47900 : 342.0) Protein of unknown function (DUF1624); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1624 (InterPro:IPR012429); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1624) (TAIR:AT5G27730.1). & (gnl|cdd|39881 : 308.0) no description available & (gnl|cdd|34021 : 105.0) no description available & (reliability: 684.0) & (original description: Putative Sb04g021400, Description = Putative uncharacterized protein Sb04g021400, PFAM = PF07786)' T '35.2' 'not assigned.unknown' 'niben044scf00005288ctg000_501-4192' '(at2g42040 : 80.1) CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 219 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative MTR_7g093350, Description = WRC protein, PFAM = PF08879)' T '35.2' 'not assigned.unknown' 'niben044scf00005299ctg010_11283-17665' '(at5g66930 : 273.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1649 (InterPro:IPR012445); Has 247 Blast hits to 247 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 89; Fungi - 83; Plants - 58; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|71294 : 134.0) no description available & (gnl|cdd|39693 : 127.0) no description available & (reliability: 546.0) & (original description: Putative ATG101, Description = Autophagy-related protein 101, PFAM = PF07855)' T '35.2' 'not assigned.unknown' 'niben044scf00005333ctg014_1-2571' '(at2g20760 : 118.0) Clathrin light chain protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin light chain (InterPro:IPR000996); BEST Arabidopsis thaliana protein match is: Clathrin light chain protein (TAIR:AT2G40060.1); Has 1791 Blast hits to 1279 proteins in 282 species: Archae - 0; Bacteria - 563; Metazoa - 557; Fungi - 96; Plants - 161; Viruses - 0; Other Eukaryotes - 414 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative CLC1, Description = Clathrin light chain protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00005358ctg019_1-1417' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00005358ctg028_1-2163' ' no hits & (original description: Putative , Description = , PFAM = PF01657)' T '35.2' 'not assigned.unknown' 'niben044scf00005429ctg007_16331-20670' '(at2g30350 : 256.0) Excinuclease ABC, C subunit, N-terminal; FUNCTIONS IN: nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Excinuclease ABC, C subunit, N-terminal (InterPro:IPR000305); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38215 : 154.0) no description available & (reliability: 512.0) & (original description: Putative PGSC0003DMG400020864, Description = Structure-specific endonuclease subunit SLX1 homolog, PFAM = PF01541)' T '35.2' 'not assigned.unknown' 'niben044scf00005464ctg007_5752-7863' ' no hits & (original description: Putative PGSC0003DMG400004873, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00005482ctg012_4651-7003' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00005506ctg008_1500-6275' ' no hits & (original description: Putative PGSC0003DMG400004043, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00005537ctg004_1-1865' '(at1g10090 : 132.0) Early-responsive to dehydration stress protein (ERD4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: lipases;hydrolases, acting on ester bonds (TAIR:AT1G58520.1); Has 1417 Blast hits to 1261 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 180; Fungi - 691; Plants - 423; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|36349 : 102.0) no description available & (gnl|cdd|66403 : 98.8) no description available & (reliability: 264.0) & (original description: Putative HYP1, Description = ERD (Early-responsive to dehydration stress) family protein, PFAM = PF02714)' T '35.2' 'not assigned.unknown' 'niben044scf00005537ctg005_1-8261' '(at1g58520 : 602.0) RXW8; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G59406.1); Has 3216 Blast hits to 3174 proteins in 135 species: Archae - 0; Bacteria - 157; Metazoa - 0; Fungi - 2; Plants - 3048; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|36349 : 361.0) no description available & (gnl|cdd|66403 : 244.0) no description available & (reliability: 1204.0) & (original description: Putative HYP1, Description = CSC1-like protein HYP1, PFAM = PF14703;PF13967;PF02714)' T '35.2' 'not assigned.unknown' 'niben044scf00005542ctg000_1-1687' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00005589ctg000_10893-13204' '(at3g44150 : 105.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11800.1); Has 76 Blast hits to 75 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative At3g11800, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00005589ctg026_15427-20553' '(at3g11680 : 466.0) Aluminium activated malate transporter family protein; INVOLVED IN: response to aluminum ion; CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G08440.1); Has 773 Blast hits to 771 proteins in 231 species: Archae - 0; Bacteria - 374; Metazoa - 0; Fungi - 30; Plants - 352; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|39909 : 366.0) no description available & (gnl|cdd|85194 : 161.0) no description available & (reliability: 932.0) & (original description: Putative ALMT8, Description = Aluminum-activated malate transporter 8, PFAM = PF11744)' T '35.2' 'not assigned.unknown' 'niben044scf00005595ctg007_161-4395' '(at5g04320 : 85.5) Shugoshin C terminus; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: meiotic chromosome segregation; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Shugoshin, C-terminal (InterPro:IPR011515); BEST Arabidopsis thaliana protein match is: Shugoshin C terminus (TAIR:AT3G10440.1); Has 2871 Blast hits to 2420 proteins in 372 species: Archae - 12; Bacteria - 318; Metazoa - 1409; Fungi - 181; Plants - 120; Viruses - 4; Other Eukaryotes - 827 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative PGSC0003DMG400000414, Description = At5g04320, PFAM = PF07557)' T '35.2' 'not assigned.unknown' 'niben044scf00005632ctg008_1-351' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00005637ctg002_6910-13130' '(at5g62575 : 112.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G47833.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative SDH7B, Description = Succinate dehydrogenase subunit 7B, mitochondrial, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00005648ctg005_7056-10654' ' (original description: Putative , Description = Putative ovule protein, PFAM = PF03108;PF10551)' T '35.2' 'not assigned.unknown' 'niben044scf00005657ctg002_4978-11610' '(at2g35880 : 122.0) TPX2 (targeting protein for Xklp2) protein family; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT4G32330.3); Has 16554 Blast hits to 10282 proteins in 807 species: Archae - 18; Bacteria - 1410; Metazoa - 6904; Fungi - 1967; Plants - 895; Viruses - 63; Other Eukaryotes - 5297 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative Sb05g022180, Description = Putative uncharacterized protein Sb05g022180, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'niben044scf00005686ctg001_850-6960' '(at4g35760 : 326.0) Encodes a bimodular enzyme comprising an integral domain homologous to the catalytic subunit of mammalian vitamin K epoxide reductase (VKORC1, EC 1.1.4.1) that is fused to a soluble thioredoxin-like moiety. Using yeast microsomes as a recombinant system, it was shown that the VKORC1 domain of At4g35760 functions as a stringent naphthoquinone reductase, and that its reduced Trx-like partner can serve as its electron donor. Located in plastid.; NAD(P)H dehydrogenase (quinone)s; FUNCTIONS IN: NAD(P)H dehydrogenase (quinone) activity; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vitamin K epoxide reductase (InterPro:IPR012932), Thioredoxin-like fold (InterPro:IPR012336); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87393 : 101.0) no description available & (reliability: 652.0) & (original description: Putative Sb04g011116, Description = Putative uncharacterized protein Sb04g011116, PFAM = PF07884)' T '35.2' 'not assigned.unknown' 'niben044scf00005698ctg007_1-3310' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00005698ctg017_737-3231' ' (original description: Putative Tgt1ORF2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00005704ctg008_1-1780' ' no hits & (original description: Putative PGSC0003DMG400034844, Description = Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00005709ctg007_22953-31795' '(at3g49590 : 380.0) Autophagy-related protein 13; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 13 (InterPro:IPR018731); BEST Arabidopsis thaliana protein match is: Autophagy-related protein 13 (TAIR:AT3G18770.1). & (gnl|cdd|39773 : 226.0) no description available & (reliability: 760.0) & (original description: Putative ATG13b, Description = Autophagy-related protein 13b, PFAM = PF10033)' T '35.2' 'not assigned.unknown' 'niben044scf00005720ctg016_1-2433' ' no hits & (original description: Putative PGSC0003DMG400031482, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00005727ctg001_6280-9858' '(at5g12470 : 305.0) Protein of unknown function (DUF3411); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF399 and DUF3411) (TAIR:AT2G40400.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 610.0) & (original description: Putative RER4, Description = DUF3411 domain protein, PFAM = PF11891)' T '35.2' 'not assigned.unknown' 'niben044scf00005741ctg013_1-2233' ' no hits & (original description: Putative , Description = , PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben044scf00005750ctg004_1-4485' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF03108)' T '35.2' 'not assigned.unknown' 'niben044scf00005766ctg005_1-1631' ' no hits & (original description: Putative PGSC0003DMG400043768, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00005797ctg009_1-1188' ' no hits & (original description: Putative , Description = Mitochondrial fission protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00005810ctg010_7059-10794' ' no hits & (original description: Putative BnaC03g57280D, Description = BnaA06g17060D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00005830ctg011_20433-29632' '(at1g32260 : 172.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35480.1); Has 48 Blast hits to 48 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative F383_20656, Description = Envelope glycoprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00005869ctg001_4210-6573' ' no hits & (original description: Putative CBSCLC3, Description = Chloride channel protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00005887ctg005_18080-25043' ' (original description: Putative vib, Description = MIP08680p, PFAM = PF02121)' T '35.2' 'not assigned.unknown' 'niben044scf00005900ctg013_6466-9370' ' no hits & (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF08284)' T '35.2' 'not assigned.unknown' 'niben044scf00005914ctg002_5419-11140' '(at5g12900 : 509.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1018.0) & (original description: Putative IRKI, Description = IRK-interacting protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00005924ctg024_537-3142' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00005931ctg006_2687-5530' ' no hits & (original description: Putative , Description = , PFAM = PF09331)' T '35.2' 'not assigned.unknown' 'niben044scf00005932ctg010_5135-8989' '(at4g09620 : 195.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); Has 234 Blast hits to 198 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative At4g09620, Description = Mitochondrial transcription termination factor family protein, PFAM = PF02536)' T '35.2' 'not assigned.unknown' 'niben044scf00005945ctg003_2115-5079' ' no hits & (original description: Putative glysoja_007451, Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00005966ctg000_8135-11364' '(at5g49800 : 340.0) Polyketide cyclase/dehydrase and lipid transport superfamily protein; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); Has 197 Blast hits to 196 proteins in 72 species: Archae - 0; Bacteria - 22; Metazoa - 96; Fungi - 2; Plants - 31; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (reliability: 680.0) & (original description: Putative At5g49800, Description = Putative uncharacterized protein At5g49800, PFAM = PF01852)' T '35.2' 'not assigned.unknown' 'niben044scf00005976ctg011_1-1184' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00005993ctg001_42-2137' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00006006ctg001_5956-8718' '(at1g31130 : 175.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 246 Blast hits to 244 proteins in 29 species: Archae - 2; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 222; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative ORF, Description = Putative uncharacterized protein ORF, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006020ctg018_1137-3203' '(atmg00520 : 223.0) hypothetical protein; MATR; FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity; INVOLVED IN: RNA-dependent DNA replication, RNA splicing; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Intron maturase, type II (InterPro:IPR000442), RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477); BEST Arabidopsis thaliana protein match is: Intron maturase, type II family protein (TAIR:AT1G74350.1). & (gnl|cdd|39965 : 144.0) no description available & (reliability: 446.0) & (original description: Putative matR, Description = Maturase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006022ctg001_1-3277' '(at3g07470 : 164.0) Protein of unknown function, DUF538; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT3G07460.1); Has 638 Blast hits to 638 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 637; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|86647 : 137.0) no description available & (reliability: 328.0) & (original description: Putative mc304, Description = AT3g07470/F21O3_18, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben044scf00006092ctg004_19713-23608' '(at1g78790 : 108.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2008 (InterPro:IPR018552); Has 27 Blast hits to 27 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative At1g78790, Description = Putative uncharacterized protein At1g78790, PFAM = PF09415)' T '35.2' 'not assigned.unknown' 'niben044scf00006097ctg005_1-7939' '(at5g63220 : 325.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0363 (InterPro:IPR007317); Has 304 Blast hits to 301 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 121; Plants - 35; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|38234 : 160.0) no description available & (reliability: 650.0) & (original description: Putative At5g63220, Description = At5g63220, PFAM = PF04190)' T '35.2' 'not assigned.unknown' 'niben044scf00006099ctg011_1-2913' ' no hits & (original description: Putative , Description = 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006102ctg001_1-1680' '(at3g02420 : 171.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0121 (InterPro:IPR005344); Has 72 Blast hits to 71 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 60; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative At3g02420, Description = AT3g02420/F16B3_5, PFAM = PF03661)' T '35.2' 'not assigned.unknown' 'niben044scf00006106ctg006_11843-15710' '(at3g26350 : 171.0) LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13050.1); Has 3534 Blast hits to 2704 proteins in 342 species: Archae - 6; Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162; Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink). & (gnl|cdd|70773 : 104.0) no description available & (reliability: 342.0) & (original description: Putative BnaC02g36050D, Description = BnaC02g36050D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006140ctg013_4876-7767' '(at1g78810 : 111.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative glysoja_038102, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006142ctg030_8193-11978' ' (original description: Putative At5g64130, Description = cAMP-regulated phosphoprotein-like protein, PFAM = PF04667)' T '35.2' 'not assigned.unknown' 'niben044scf00006151ctg002_1-5737' ' no hits & (original description: Putative BnaA09g23070D, Description = BnaA09g23070D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006151ctg015_6466-9420' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'niben044scf00006157ctg010_241-8682' ' no hits & (original description: Putative glysoja_000309, Description = Probable magnesium transporter, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006175ctg028_1509-8987' '(at4g39900 : 103.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative PGSC0003DMG400001876, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006210ctg009_3508-5849' ' no hits & (original description: Putative tatA, Description = Sec-independent protein translocase protein TATA, chloroplastic, PFAM = PF02416)' T '35.2' 'not assigned.unknown' 'niben044scf00006218ctg013_5051-7708' '(at4g16530 : 112.0) Family of unknown function (DUF577); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF577 (InterPro:IPR007598); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF577) (TAIR:AT5G37410.1); Has 736 Blast hits to 673 proteins in 194 species: Archae - 0; Bacteria - 81; Metazoa - 201; Fungi - 106; Plants - 128; Viruses - 0; Other Eukaryotes - 220 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative BnaA03g42670D, Description = BnaA03g42670D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006220ctg027_1-11198' '(at1g48360 : 760.0) zinc ion binding;nucleic acid binding;hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HIP116, Rad5p N-terminal (InterPro:IPR014905); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37354 : 536.0) no description available & (reliability: 1520.0) & (original description: Putative FAN1, Description = Fanconi-associated nuclease 1, PFAM = PF08774)' T '35.2' 'not assigned.unknown' 'niben044scf00006224ctg005_1-2074' '(at4g40050 : 211.0) FUNCTIONS IN: signal transducer activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP013022 (InterPro:IPR016607), Regulator of G protein signalling (InterPro:IPR000342); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3550/UPF0682) (TAIR:AT3G03570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative scai, Description = Protein SCAI, PFAM = PF12070)' T '35.2' 'not assigned.unknown' 'niben044scf00006245ctg003_12224-15027' '(at3g10940 : 343.0) dual specificity protein phosphatase (DsPTP1) family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine/serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, dephosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: dual specificity protein phosphatase (DsPTP1) family protein (TAIR:AT3G52180.2); Has 897 Blast hits to 897 proteins in 122 species: Archae - 6; Bacteria - 12; Metazoa - 607; Fungi - 18; Plants - 142; Viruses - 11; Other Eukaryotes - 101 (source: NCBI BLink). & (gnl|cdd|36928 : 113.0) no description available & (reliability: 686.0) & (original description: Putative DSP6, Description = Dual-specificity protein phosphatase 6, PFAM = PF00782)' T '35.2' 'not assigned.unknown' 'niben044scf00006290ctg012_9182-12845' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00006303ctg014_1277-6028' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00006305ctg003_1567-8213' '(at4g17420 : 400.0) Tryptophan RNA-binding attenuator protein-like; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF124 (InterPro:IPR002838), Tryptophan RNA-binding attenuator protein-like (InterPro:IPR016031); BEST Arabidopsis thaliana protein match is: Tryptophan RNA-binding attenuator protein-like (TAIR:AT5G47420.1); Has 844 Blast hits to 844 proteins in 391 species: Archae - 83; Bacteria - 631; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (gnl|cdd|85816 : 170.0) no description available & (reliability: 800.0) & (original description: Putative At5g47420, Description = Putative uncharacterized protein At5g47420, PFAM = PF01987)' T '35.2' 'not assigned.unknown' 'niben044scf00006316ctg002_687-3924' ' no hits & (original description: Putative , Description = DNA/RNA polymerases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006338ctg008_11409-13970' '(at2g14110 : 202.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; CONTAINS InterPro DOMAIN/s: HAD-superfamily phosphatase, subfamily IIIC (InterPro:IPR010033), NLI interacting factor (InterPro:IPR004274); Has 332 Blast hits to 325 proteins in 144 species: Archae - 0; Bacteria - 33; Metazoa - 65; Fungi - 121; Plants - 76; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|39749 : 122.0) no description available & (reliability: 404.0) & (original description: Putative pco127416b, Description = Magnesium-dependent phosphatase 1, PFAM = PF12689;PF12689)' T '35.2' 'not assigned.unknown' 'niben044scf00006358ctg006_930-3404' '(at1g27290 : 135.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative BnaAnng21740D, Description = BnaAnng21740D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006362ctg037_1103-4182' ' no hits & (original description: Putative At1g73350, Description = Ankyrin repeat domain-containing protein 50 isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006369ctg001_5959-12865' '(at5g24740 : 704.0) EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (gnl|cdd|34648 : 160.0) no description available & (gnl|cdd|37020 : 133.0) no description available & (reliability: 1408.0) & (original description: Putative At5g24740, Description = Putative uncharacterized protein Sb07g001580, PFAM = PF16909)' T '35.2' 'not assigned.unknown' 'niben044scf00006411ctg000_1094-10530' '(at5g04460 : 480.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Ring/U-Box superfamily protein (TAIR:AT2G27950.1). & (reliability: 960.0) & (original description: Putative BnaA01g31640D, Description = BnaA01g31640D protein, PFAM = PF13920)' T '35.2' 'not assigned.unknown' 'niben044scf00006418ctg000_7389-12850' '(at5g53220 : 162.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative PGSC0003DMG400009100, Description = BnaA03g12380D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006432ctg002_1-1834' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'niben044scf00006434ctg010_13365-18490' '(at3g52110 : 207.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages. & (reliability: 414.0) & (original description: Putative F383_31672, Description = Polyribonucleotide nucleotidyltransferase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006435ctg007_1-4348' ' no hits & (original description: Putative PGSC0003DMG400010668, Description = Putative ovule protein, PFAM = PF02362)' T '35.2' 'not assigned.unknown' 'niben044scf00006449ctg007_1-963' '(at4g13530 : 124.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10080.1); Has 70 Blast hits to 69 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative PGSC0003DMG400012413, Description = Actin-binding LIM protein 1, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006455ctg000_317-4045' ' no hits & (original description: Putative , Description = , PFAM = PF00403)' T '35.2' 'not assigned.unknown' 'niben044scf00006456ctg005_10194-12889' ' no hits & (original description: Putative MADSy3, Description = Type I MADS box transcription factor, PFAM = PF00319)' T '35.2' 'not assigned.unknown' 'niben044scf00006468ctg000_2946-5355' ' no hits & (original description: Putative PGSC0003DMG400008002, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006493ctg029_1568-7162' '(at5g48240 : 213.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 286 Blast hits to 283 proteins in 145 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 97; Plants - 41; Viruses - 1; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative BnaC07g26310D, Description = BnaC07g26310D protein, PFAM = PF07890)' T '35.2' 'not assigned.unknown' 'niben044scf00006501ctg011_15749-21566' '(at5g61040 : 209.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 418.0) & (original description: Putative PGSC0003DMG400024637, Description = Formate hydrogenlyase subunit 5, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006502ctg014_3013-5795' ' no hits & (original description: Putative PGSC0003DMG402013972, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006502ctg014_3031-5652' ' no hits & (original description: Putative PGSC0003DMG402013972, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006506ctg007_1-1695' '(at5g58575 : 179.0) CONTAINS InterPro DOMAIN/s: Sgf11, transcriptional regulation (InterPro:IPR013246); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative PGSC0003DMG400030447, Description = SAGA-associated factor 11, PFAM = PF08209)' T '35.2' 'not assigned.unknown' 'niben044scf00006508ctg011_3450-5865' ' no hits & (original description: Putative , Description = , PFAM = PF00098)' T '35.2' 'not assigned.unknown' 'niben044scf00006514ctg006_4727-7654' ' no hits & (original description: Putative OXS3, Description = Oxidative stress 3, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006575ctg022_1-18498' '(at1g05960 : 877.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Uncharacterized protein (TAIR:AT2G41830.1); Has 335 Blast hits to 327 proteins in 101 species: Archae - 0; Bacteria - 6; Metazoa - 143; Fungi - 47; Plants - 128; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37088 : 364.0) no description available & (reliability: 1754.0) & (original description: Putative At1g05960, Description = ARM repeat superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006616ctg007_7200-12000' ' no hits & (original description: Putative Ccrd_021451, Description = PAK-box/P21-Rho-binding, PFAM = PF00786)' T '35.2' 'not assigned.unknown' 'niben044scf00006626ctg011_1-3436' '(at5g18130 : 123.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative PGSC0003DMG400008354, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006628ctg005_3636-6718' ' no hits & (original description: Putative , Description = , PFAM = PF14111)' T '35.2' 'not assigned.unknown' 'niben044scf00006637ctg025_3601-6462' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00006661ctg001_432-8824' '(at2g26310 : 379.0) Chalcone-flavanone isomerase family protein; FUNCTIONS IN: intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT3G63170.1). & (reliability: 758.0) & (original description: Putative FAP2, Description = Fatty-acid-binding protein 2, PFAM = PF16035)' T '35.2' 'not assigned.unknown' 'niben044scf00006672ctg020_1120-6467' '(at5g11810 : 307.0) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 614.0) & (original description: Putative Sb04g002870, Description = Putative uncharacterized protein Sb04g002870, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006694ctg010_11955-14515' ' no hits & (original description: Putative PGSC0003DMG400043561, Description = , PFAM = PF03754)' T '35.2' 'not assigned.unknown' 'niben044scf00006717ctg028_7318-9318' ' no hits & (original description: Putative PGSC0003DMG400031266, Description = Putative nam-like protein, identical, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006747ctg004_7942-11198' '(at5g25500 : 368.0) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 736.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00006753ctg007_4168-6915' ' no hits & (original description: Putative PGSC0003DMG400009722, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006772ctg001_3754-9888' '(at3g07860 : 154.0) Ubiquitin-like superfamily protein; BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT5G25340.1); Has 145 Blast hits to 145 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 77; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative SNRNP25, Description = U11/U12 small nuclear ribonucleoprotein 25 kDa protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006787ctg005_48480-52850' '(at5g50410 : 144.0) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00006787ctg005_48486-52804' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00006792ctg021_1-1839' ' no hits & (original description: Putative PGSC0003DMG400019468, Description = RNA binding protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006808ctg004_1-3420' ' no hits & (original description: Putative VAC14, Description = VAC14-like protein, PFAM = PF11916)' T '35.2' 'not assigned.unknown' 'niben044scf00006821ctg009_5944-11278' '(at1g56180 : 405.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27290.1); Has 436 Blast hits to 436 proteins in 83 species: Archae - 0; Bacteria - 153; Metazoa - 0; Fungi - 0; Plants - 160; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (reliability: 810.0) & (original description: Putative F14G9.20, Description = At1g56180/F14G9_20, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006826ctg002_1681-4912' ' no hits & (original description: Putative , Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006826ctg002_1903-4390' ' no hits & (original description: Putative , Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00006883ctg013_14365-16638' ' no hits & (original description: Putative PGSC0003DMG400015363, Description = Rapid ALkalinization Factor, PFAM = PF05498)' T '35.2' 'not assigned.unknown' 'niben044scf00006899ctg004_1-2093' ' no hits & (original description: Putative PGSC0003DMG400027643, Description = Ankyrin repeat-containing-like protein, PFAM = PF12796)' T '35.2' 'not assigned.unknown' 'niben044scf00006925ctg002_1-3009' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00006995ctg006_1456-4481' '(at5g20610 : 212.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26160.1); Has 918 Blast hits to 759 proteins in 180 species: Archae - 6; Bacteria - 105; Metazoa - 264; Fungi - 89; Plants - 167; Viruses - 5; Other Eukaryotes - 282 (source: NCBI BLink). & (reliability: 424.0) & (original description: Putative PMIR1, Description = BnaC09g37250D protein, PFAM = PF10358)' T '35.2' 'not assigned.unknown' 'niben044scf00007015ctg003_204-812' ' no hits & (original description: Putative PGSC0003DMG400018146, Description = , PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'niben044scf00007068ctg001_953-5895' '(q5h8a6|casto_lotja : 318.0) Putative ion channel CASTOR, chloroplast precursor - Lotus japonicus & (at5g49960 : 248.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1012 (InterPro:IPR010420); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1012) (TAIR:AT5G02940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 496.0) & (original description: Putative DMI, Description = DMI1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00007068ctg002_1-10314' '(q5h8a6|casto_lotja : 505.0) Putative ion channel CASTOR, chloroplast precursor - Lotus japonicus & (at5g49960 : 432.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1012 (InterPro:IPR010420); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1012) (TAIR:AT5G02940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 864.0) & (original description: Putative DMI1, Description = DMI1, PFAM = PF06241)' T '35.2' 'not assigned.unknown' 'niben044scf00007070ctg010_19389-22354' '(at5g20090 : 154.0) Uncharacterised protein family (UPF0041); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0041 (InterPro:IPR005336); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0041) (TAIR:AT4G14695.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36803 : 133.0) no description available & (gnl|cdd|67278 : 119.0) no description available & (reliability: 308.0) & (original description: Putative MPC1, Description = Mitochondrial pyruvate carrier 1, PFAM = PF03650)' T '35.2' 'not assigned.unknown' 'niben044scf00007091ctg001_3174-5812' ' no hits & (original description: Putative , Description = , PFAM = PF03732)' T '35.2' 'not assigned.unknown' 'niben044scf00007105ctg019_1-3138' ' no hits & (original description: Putative PGSC0003DMG400004389, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00007134ctg011_690-3946' '(at2g43250 : 583.0) unknown protein; Has 32 Blast hits to 32 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1166.0) & (original description: Putative BnaA04g24920D, Description = BnaA04g24920D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00007138ctg010_9064-10459' ' no hits & (original description: Putative Sb04g030900, Description = Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00007139ctg004_6157-8689' '(at4g16580 : 367.0) Protein phosphatase 2C family protein; FUNCTIONS IN: phosphoprotein phosphatase activity, catalytic activity; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Sporulation stage II, protein E C-terminal (InterPro:IPR010822); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66720.1); Has 838 Blast hits to 828 proteins in 210 species: Archae - 0; Bacteria - 2; Metazoa - 184; Fungi - 235; Plants - 232; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (gnl|cdd|36593 : 281.0) no description available & (reliability: 734.0) & (original description: Putative gpm564, Description = Protein phosphatase 2c, putative, PFAM = PF07228)' T '35.2' 'not assigned.unknown' 'niben044scf00007145ctg009_8918-11789' ' no hits & (original description: Putative , Description = , PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben044scf00007155ctg006_16656-19720' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00007183ctg004_7070-8705' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00007183ctg011_8693-12167' ' no hits & (original description: Putative PGSC0003DMG400013104, Description = Putative ovule protein, PFAM = PF02362)' T '35.2' 'not assigned.unknown' 'niben044scf00007201ctg019_1-15370' '(at3g03560 : 357.0) unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23490.1); Has 157 Blast hits to 146 proteins in 38 species: Archae - 3; Bacteria - 14; Metazoa - 8; Fungi - 0; Plants - 120; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 714.0) & (original description: Putative TCM_025689, Description = Uncharacterized protein isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00007213ctg016_513-6875' '(at3g11760 : 615.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1230.0) & (original description: Putative At5g04860, Description = Multidrug and toxic compound extrusion protein, PFAM = PF10358)' T '35.2' 'not assigned.unknown' 'niben044scf00007225ctg002_8013-14586' '(at4g12760 : 217.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 434.0) & (original description: Putative , Description = , PFAM = PF14766;PF14767;PF14768)' T '35.2' 'not assigned.unknown' 'niben044scf00007229ctg014_25656-32903' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00007237ctg000_22482-25011' '(atmg00660 : 138.0) hypothetical protein; unknown protein. & (reliability: 276.0) & (original description: Putative orf176, Description = Orf176 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00007244ctg029_9407-13095' '(at5g41590 : 157.0) Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT2G38640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86676 : 127.0) no description available & (reliability: 314.0) & (original description: Putative At5g41590, Description = Protein LURP-one-related 17, PFAM = PF04525)' T '35.2' 'not assigned.unknown' 'niben044scf00007340ctg006_30693-32995' '(at5g18150 : 85.9) Methyltransferase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G14602.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative At5g18150, Description = Emb}, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00007342ctg012_1-3056' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00007358ctg001_9869-14570' '(at2g04900 : 186.0) unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF423 (InterPro:IPR006696); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38682 : 123.0) no description available & (reliability: 372.0) & (original description: Putative CDO504, Description = CDO504, PFAM = PF04241)' T '35.2' 'not assigned.unknown' 'niben044scf00007370ctg004_1-4930' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00007392ctg005_163-3488' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00007461ctg004_9475-11705' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00007494ctg007_3051-5729' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00007503ctg035_3574-4663' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00007519ctg009_1-744' '(at5g53670 : 81.3) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative TER1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben044scf00007522ctg012_6498-12925' '(at2g19160 : 540.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT4G30060.1); Has 601 Blast hits to 601 proteins in 26 species: Archae - 0; Bacteria - 17; Metazoa - 0; Fungi - 0; Plants - 557; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|86287 : 467.0) no description available & (reliability: 1080.0) & (original description: Putative BnaA09g52890D, Description = BnaA09g52890D protein, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben044scf00007537ctg038_13910-22283' '(at1g75150 : 160.0) unknown protein; Has 38228 Blast hits to 24529 proteins in 1168 species: Archae - 169; Bacteria - 4103; Metazoa - 14594; Fungi - 5866; Plants - 1861; Viruses - 317; Other Eukaryotes - 11318 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative glysoja_022019, Description = , PFAM = PF09444)' T '35.2' 'not assigned.unknown' 'niben044scf00007553ctg011_1-6289' ' (original description: Putative PDS2, Description = Amine oxidase, PFAM = PF13450)' T '35.2' 'not assigned.unknown' 'niben044scf00007562ctg002_19422-19790' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00007634ctg004_22645-27295' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00007641ctg004_1544-9380' '(at5g26910 : 327.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G58650.1). & (reliability: 654.0) & (original description: Putative , Description = , PFAM = PF14309;PF14383)' T '35.2' 'not assigned.unknown' 'niben044scf00007693ctg019_9141-13620' ' no hits & (original description: Putative , Description = Seed biotin-containing SBP65, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00007719ctg008_1659-5499' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00007719ctg011_580-10386' '(at5g52200 : 100.0) phosphoprotein phosphatase inhibitors; FUNCTIONS IN: phosphoprotein phosphatase inhibitor activity; INVOLVED IN: regulation of signal transduction, regulation of phosphoprotein phosphatase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase inhibitor 2 (IPP-2) (InterPro:IPR007062). & (reliability: 200.0) & (original description: Putative Os05g0301600, Description = Os05g0301600 protein, PFAM = PF04979)' T '35.2' 'not assigned.unknown' 'niben044scf00007755ctg008_1-7439' '(at3g22270 : 633.0) Topoisomerase II-associated protein PAT1; BEST Arabidopsis thaliana protein match is: Topoisomerase II-associated protein PAT1 (TAIR:AT4G14990.1); Has 263 Blast hits to 260 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 98; Fungi - 15; Plants - 121; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (reliability: 1266.0) & (original description: Putative Sb09g025190, Description = Putative uncharacterized protein Sb09g025190, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00007781ctg016_1-5129' '(at1g76405 : 203.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20816.1); Has 52 Blast hits to 52 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 406.0) & (original description: Putative OEP21B, Description = Outer envelope pore protein 21B, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00007787ctg020_3616-5942' ' no hits & (original description: Putative PGSC0003DMG400005861, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00007793ctg007_755-2341' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00007807ctg007_20607-25241' ' no hits & (original description: Putative PGSC0003DMG400025985, Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben044scf00007815ctg001_2427-3936' ' no hits & (original description: Putative BnaC06g21340D, Description = BnaC06g21340D protein, PFAM = PF12609)' T '35.2' 'not assigned.unknown' 'niben044scf00007826ctg017_10671-12731' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00007845ctg000_4348-8248' '(at1g10380 : 98.6) Putative membrane lipoprotein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 280 Blast hits to 279 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 280; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 197.2) & (original description: Putative , Description = Wall-associated receptor kinase-like 20, PFAM = PF14380)' T '35.2' 'not assigned.unknown' 'niben044scf00007871ctg022_2229-4525' '(at1g71865 : 90.5) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 33 Blast hits to 33 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00007897ctg005_4001-6365' ' no hits & (original description: Putative glysoja_007451, Description = T32E20.9, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00007905ctg008_1-2254' ' (original description: Putative TIM, Description = Triosephosphate isomerase, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00007926ctg001_1-1946' ' no hits & (original description: Putative PGSC0003DMG400020979, Description = Putative B3 domain-containing protein-like, PFAM = PF02362)' T '35.2' 'not assigned.unknown' 'niben044scf00007930ctg009_101-4345' '(at1g29240 : 117.0) Protein of unknown function (DUF688); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF688) (TAIR:AT2G34170.2); Has 97 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68662 : 111.0) no description available & (reliability: 234.0) & (original description: Putative , Description = , PFAM = PF05097)' T '35.2' 'not assigned.unknown' 'niben044scf00007959ctg000_1215-3607' ' no hits & (original description: Putative , Description = Putative nuclear receptor subfamily 2 group C member 2-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00007961ctg000_1-1408' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00007972ctg009_9084-13558' '(at1g52220 : 122.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: photosystem I P subunit (TAIR:AT2G46820.2); Has 251 Blast hits to 251 proteins in 43 species: Archae - 0; Bacteria - 66; Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative CURT1C, Description = Protein CURVATURE THYLAKOID 1C, chloroplastic, PFAM = PF14159)' T '35.2' 'not assigned.unknown' 'niben044scf00007974ctg012_6843-11647' ' no hits & (original description: Putative PGSC0003DMG400038980, Description = Putative ovule protein, PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben044scf00007978ctg008_2358-6343' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00007980ctg002_3672-5730' ' (original description: Putative PRP5, Description = 120 kDa pistil extensin-like protein, PFAM = PF01190)' T '35.2' 'not assigned.unknown' 'niben044scf00007991ctg020_1962-3646' ' no hits & (original description: Putative PGSC0003DMG400001016, Description = Non-specific serine/threonine protein kinase, PFAM = PF00069)' T '35.2' 'not assigned.unknown' 'niben044scf00007993ctg002_3815-7257' '(at5g48500 : 86.3) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative F383_27938, Description = Atp-dependent rna helicase dbp7, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00007993ctg002_22281-26411' ' no hits & (original description: Putative At5g48500, Description = Putative uncharacterized protein At5g48500, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00008011ctg013_2623-5410' '(at5g23100 : 266.0) Protein of unknown function, DUF617; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF617, plant (InterPro:IPR006460); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF617 (TAIR:AT3G25640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68336 : 230.0) no description available & (reliability: 532.0) & (original description: Putative MIZ1, Description = BnaA06g33470D protein, PFAM = PF04759)' T '35.2' 'not assigned.unknown' 'niben044scf00008014ctg001_8237-14404' '(at5g06610 : 414.0) Protein of unknown function (DUF620); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF620 (InterPro:IPR006873); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF620) (TAIR:AT1G27690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68363 : 331.0) no description available & (reliability: 828.0) & (original description: Putative OSJNBa0091P11.2, Description = Putative uncharacterized protein OSJNBa0091P11.2, PFAM = PF04788)' T '35.2' 'not assigned.unknown' 'niben044scf00008017ctg005_1577-5280' '(at4g02725 : 168.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; Has 107 Blast hits to 107 proteins in 55 species: Archae - 0; Bacteria - 69; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative At4g02725, Description = At4g02725, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00008017ctg012_781-3830' ' no hits & (original description: Putative PGSC0003DMG400019330, Description = FASCICLIN-like arabinogalactan protein 21, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00008037ctg007_31773-33873' ' (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00008100ctg003_8314-10646' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00008103ctg006_16843-20988' ' no hits & (original description: Putative PGSC0003DMG400012178, Description = Putative ovule protein, PFAM = PF00847;PF00847)' T '35.2' 'not assigned.unknown' 'niben044scf00008108ctg002_4794-7273' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben044scf00008130ctg002_1-2142' ' no hits & (original description: Putative Os06g0704400, Description = OSJNBa0091C07.2 protein, PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'niben044scf00008143ctg011_1-618' ' no hits & (original description: Putative PGSC0003DMG400016410, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00008160ctg003_65-5768' '(at4g14385 : 112.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf6 (InterPro:IPR015418); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72755 : 98.0) no description available & (reliability: 224.0) & (original description: Putative PGSC0003DMG400010299, Description = Histone acetyltransferase subunit NuA4-domain containing protein, PFAM = PF09340)' T '35.2' 'not assigned.unknown' 'niben044scf00008188ctg019_7747-12204' ' no hits & (original description: Putative PGSC0003DMG400042601, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00008220ctg000_284-3768' '(at4g39840 : 322.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 20719 Blast hits to 6096 proteins in 607 species: Archae - 22; Bacteria - 3243; Metazoa - 4364; Fungi - 2270; Plants - 237; Viruses - 128; Other Eukaryotes - 10455 (source: NCBI BLink). & (reliability: 644.0) & (original description: Putative T5J17.10, Description = Putative uncharacterized protein AT4g39840, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00008266ctg020_594-3669' '(at5g50090 : 119.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative TCM_010230, Description = Serine/threonine-protein kinase TAO3, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben044scf00008306ctg000_9497-11898' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00008325ctg009_3819-6757' '(at1g67960 : 119.0) CONTAINS InterPro DOMAIN/s: Membrane protein,Tapt1/CMV receptor (InterPro:IPR008010); Has 447 Blast hits to 428 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 190; Fungi - 133; Plants - 49; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative POD1, Description = Pollen defective IN guidance-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00008325ctg010_1-2013' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00008331ctg004_1-1405' ' no hits & (original description: Putative PGSC0003DMG400018121, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00008338ctg009_1836-4285' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00008365ctg002_1-757' ' (original description: Putative rTeg1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00008373ctg004_1120-3224' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00008462ctg002_24567-28656' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00008487ctg003_385-2394' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00008536ctg014_809-3410' ' no hits & (original description: Putative , Description = , PFAM = PF13960)' T '35.2' 'not assigned.unknown' 'niben044scf00008559ctg015_536-3402' ' no hits & (original description: Putative Dif54, Description = BnaA07g31240D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00008559ctg015_563-3777' ' no hits & (original description: Putative Dif54, Description = BnaA07g31240D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00008609ctg006_7725-10410' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00008623ctg005_4372-10296' '(at4g29750 : 641.0) CRS1 / YhbY (CRM) domain-containing protein; FUNCTIONS IN: RNA binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: CRM family member 3A (TAIR:AT3G23070.1); Has 408 Blast hits to 338 proteins in 45 species: Archae - 2; Bacteria - 2; Metazoa - 32; Fungi - 6; Plants - 353; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|37201 : 382.0) no description available & (gnl|cdd|85815 : 91.7) no description available & (reliability: 1282.0) & (original description: Putative BnaC07g42090D, Description = BnaC07g42090D protein, PFAM = PF01985;PF01985;PF01985)' T '35.2' 'not assigned.unknown' 'niben044scf00008633ctg004_1-4361' '(at5g63220 : 124.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0363 (InterPro:IPR007317); Has 304 Blast hits to 301 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 121; Plants - 35; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative At5g63220, Description = At5g63220, PFAM = PF04190)' T '35.2' 'not assigned.unknown' 'niben044scf00008633ctg013_2924-7704' ' (original description: Putative PGSC0003DMG402002240, Description = Queuine tRNA-ribosyltransferase subunit qtrtd1, PFAM = PF01702;PF01702)' T '35.2' 'not assigned.unknown' 'niben044scf00008655ctg001_1-4528' '(at2g02570 : 159.0) nucleic acid binding;RNA binding; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tudor subgroup (InterPro:IPR018351), Tudor domain (InterPro:IPR002999), Survival motor neuron (InterPro:IPR010304); Has 339 Blast hits to 339 proteins in 158 species: Archae - 0; Bacteria - 5; Metazoa - 136; Fungi - 89; Plants - 55; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|38236 : 104.0) no description available & (reliability: 318.0) & (original description: Putative At2g02570, Description = Nucleic acid binding, PFAM = PF06003)' T '35.2' 'not assigned.unknown' 'niben044scf00008655ctg015_25877-28737' ' no hits & (original description: Putative PGSC0003DMG400023605, Description = , PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00008655ctg015_26100-28723' ' no hits & (original description: Putative PGSC0003DMG400023605, Description = , PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00008680ctg007_2133-4461' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00008691ctg005_795-5474' ' no hits & (original description: Putative bZIP, Description = Protein ABSCISIC ACID-INSENSITIVE 5, PFAM = PF00170)' T '35.2' 'not assigned.unknown' 'niben044scf00008723ctg000_14570-19257' '(at2g46550 : 85.5) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01240.3). & (reliability: 171.0) & (original description: Putative PGSC0003DMG400018529, Description = At1g01240/F6F3_11, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00008732ctg003_6130-9114' ' no hits & (original description: Putative , Description = Melanoma inhibitory activity protein 3, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00008745ctg002_14946-24875' ' no hits & (original description: Putative arg, Description = Putative arabinogalactan-protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00008745ctg002_22552-24968' ' no hits & (original description: Putative arg, Description = Putative arabinogalactan-protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00008779ctg007_5377-9478' '(at5g19630 : 241.0) alpha/beta-Hydrolases superfamily protein; Has 1062 Blast hits to 1062 proteins in 417 species: Archae - 16; Bacteria - 763; Metazoa - 1; Fungi - 28; Plants - 66; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative At5g19630, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF02129)' T '35.2' 'not assigned.unknown' 'niben044scf00008784ctg004_255-2572' '(at5g51150 : 105.0) Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrial inner membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34630.1); Has 522 Blast hits to 429 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 235; Fungi - 150; Plants - 73; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative ST16, Description = BnaA03g13240D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00008795ctg008_579-4001' '(at2g01640 : 86.3) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 172.6) & (original description: Putative , Description = Putative reverse transcriptase, PFAM = PF15341)' T '35.2' 'not assigned.unknown' 'niben044scf00008807ctg003_7149-9574' ' (original description: Putative rt, Description = Putative polyprotein, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00008824ctg000_403-2423' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00008872ctg010_7680-10450' ' no hits & (original description: Putative , Description = , PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben044scf00008911ctg005_19897-23681' '(at4g37420 : 451.0) Domain of unknown function (DUF23); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF23) (TAIR:AT5G40720.1); Has 241 Blast hits to 241 proteins in 76 species: Archae - 0; Bacteria - 129; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85620 : 106.0) no description available & (reliability: 902.0) & (original description: Putative PGSC0003DMG400029403, Description = Glycosyltransferase family 92 protein RCOM_0530710, PFAM = PF01697)' T '35.2' 'not assigned.unknown' 'niben044scf00008963ctg009_96-2259' ' no hits & (original description: Putative , Description = DWNN domain isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00008985ctg035_9554-16933' '(at3g27310 : 188.0) encodes a protein that contains a UBX domain and regulates AtCDC48 by inhibiting its ATPase activity and by promoting the disassembly of the active hexamer. Phenotypic analysis of pux1 plants revealed that the loss of PUX1 accelerated the growth of various plant organs including roots and inflorescence shoots. AtCDC48 and SYP31 colocalize at the division plane during cytokinesis and to interact in vitro and in vivo.; plant UBX domain-containing protein 1 (PUX1); CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012); Has 392 Blast hits to 391 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 209; Fungi - 47; Plants - 86; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative PUX1, Description = Plant UBX domain-containing protein 1, PFAM = PF00789)' T '35.2' 'not assigned.unknown' 'niben044scf00009017ctg003_16450-19835' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00009035ctg004_24044-39227' '(at4g04920 : 930.0) Encodes a nuclear targeted protein that plays a role in the CBF pathway -downstream of CBF translation. Mutants have impaired cold responses, reduced levels of cold induced RNA transcripts, are sensitive to osmotic stress.; SENSITIVE TO FREEZING 6 (SFR6); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cold acclimation, circadian regulation of gene expression, response to osmotic stress, regulation of long-day photoperiodism, flowering; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages. & (reliability: 1860.0) & (original description: Putative SFR6, Description = BnaA09g20140D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00009054ctg001_20171-23322' ' no hits & (original description: Putative , Description = , PFAM = PF00010)' T '35.2' 'not assigned.unknown' 'niben044scf00009074ctg037_1336-3759' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00009140ctg003_14907-24987' '(at5g13950 : 258.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02290.1). & (reliability: 516.0) & (original description: Putative PGSC0003DMG400020237, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00009158ctg008_14959-24088' '(at3g56210 : 221.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024). & (reliability: 442.0) & (original description: Putative TCM_042405, Description = ARM repeat superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00009178ctg011_6621-8348' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00009190ctg002_1-1672' '(at5g41470 : 199.0) Nuclear transport factor 2 (NTF2) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT1G71480.1); Has 94 Blast hits to 92 proteins in 28 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative BnaA07g15360D, Description = BnaA07g15360D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00009193ctg021_1-2631' ' no hits & (original description: Putative , Description = Calmodulin-binding transcription factor SR3, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00009197ctg027_15104-18232' ' no hits & (original description: Putative , Description = , PFAM = PF03226)' T '35.2' 'not assigned.unknown' 'niben044scf00009199ctg005_1-4950' '(at3g07660 : 89.4) Kinase-related protein of unknown function (DUF1296); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1296 (InterPro:IPR009719); BEST Arabidopsis thaliana protein match is: Kinase-related protein of unknown function (DUF1296) (TAIR:AT3G13990.1); Has 3086 Blast hits to 1914 proteins in 327 species: Archae - 2; Bacteria - 372; Metazoa - 1089; Fungi - 466; Plants - 245; Viruses - 13; Other Eukaryotes - 899 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00009203ctg012_23941-25208' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00009204ctg012_2828-5596' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00009253ctg005_1480-5875' '(at5g52110 : 294.0) HIGH CHLOROPHYLL FLUORESCENCE 208 (HCF208); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2930 (InterPro:IPR021325); Has 125 Blast hits to 125 proteins in 55 species: Archae - 0; Bacteria - 72; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 588.0) & (original description: Putative CCB2, Description = Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic, PFAM = PF11152)' T '35.2' 'not assigned.unknown' 'niben044scf00009253ctg005_2005-5878' '(at5g52110 : 295.0) HIGH CHLOROPHYLL FLUORESCENCE 208 (HCF208); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2930 (InterPro:IPR021325); Has 125 Blast hits to 125 proteins in 55 species: Archae - 0; Bacteria - 72; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 590.0) & (original description: Putative CCB2, Description = Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic, PFAM = PF11152)' T '35.2' 'not assigned.unknown' 'niben044scf00009306ctg007_1-315' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00009312ctg001_8990-11379' ' no hits & (original description: Putative F383_10586, Description = Intraflagellar transport protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00009323ctg002_14775-18411' ' no hits & (original description: Putative PGSC0003DMG400026249, Description = Golgin subfamily A member 6-like protein 4, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00009332ctg002_3733-6256' ' no hits & (original description: Putative , Description = CASC3/Barentsz eIF4AIII binding, putative isoform 1, PFAM = PF09405)' T '35.2' 'not assigned.unknown' 'niben044scf00009362ctg006_1-2473' ' no hits & (original description: Putative NPP1, Description = Purple acid phosphatase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00009363ctg010_690-6850' '(at2g02410 : 312.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF901 (InterPro:IPR010298). & (gnl|cdd|69511 : 143.0) no description available & (reliability: 624.0) & (original description: Putative LOC100217107, Description = Expressed protein (With alternative splicing), PFAM = PF05991)' T '35.2' 'not assigned.unknown' 'niben044scf00009427ctg010_32992-35285' ' no hits & (original description: Putative PGSC0003DMG400026567, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00009434ctg017_11034-14967' ' no hits & (original description: Putative At4g38490, Description = Putative uncharacterized protein Sb02g026250, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00009452ctg009_5860-14658' ' (original description: Putative CPS2, Description = 8-hydroxy-copalyl diphosphate synthase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00009529ctg000_340-2441' ' no hits & (original description: Putative psbM, Description = Photosystem II reaction center protein M, PFAM = PF05151)' T '35.2' 'not assigned.unknown' 'niben044scf00009561ctg000_5372-7779' ' (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00009582ctg023_1-1561' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00009607ctg007_54-9085' '(at5g07380 : 501.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: egg cell; Has 84 Blast hits to 81 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 1002.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00009610ctg002_1-5240' '(at2g37195 : 87.4) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 23 Blast hits to 23 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative At2g37195, Description = At2g37195, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00009615ctg021_810-8883' ' no hits & (original description: Putative MTR_3g093470, Description = COP1-interacting-like protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00009622ctg028_1931-4510' ' no hits & (original description: Putative PGSC0003DMG400006569, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00009627ctg010_7791-9902' '(at3g49725 : 100.0) GTP-binding protein, HflX; FUNCTIONS IN: GTP binding; LOCATED IN: intracellular, chloroplast; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HflX (InterPro:IPR016496), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: GTP-binding protein, HflX (TAIR:AT5G57960.1); Has 11258 Blast hits to 11241 proteins in 2608 species: Archae - 167; Bacteria - 7727; Metazoa - 332; Fungi - 38; Plants - 97; Viruses - 17; Other Eukaryotes - 2880 (source: NCBI BLink). & (gnl|cdd|35631 : 87.4) no description available & (gnl|cdd|57962 : 83.2) no description available & (reliability: 200.0) & (original description: Putative hflX, Description = GTP-binding protein HflX, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00009638ctg019_1354-3887' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00009665ctg004_1-5634' '(at2g46980 : 86.3) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown. & (reliability: 172.6) & (original description: Putative PGSC0003DMG400001122, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00009686ctg004_2436-5425' '(gnl|cdd|70178 : 218.0) no description available & (at3g08600 : 179.0) Protein of unknown function (DUF1191); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1191 (InterPro:IPR010605); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1191) (TAIR:AT4G22900.1); Has 124 Blast hits to 124 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative 4B, Description = Putative uncharacterized protein 4B, PFAM = PF06697)' T '35.2' 'not assigned.unknown' 'niben044scf00009718ctg002_72-5820' '(at5g14990 : 147.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: 4 anthesis. & (reliability: 294.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00009726ctg002_1-1142' ' no hits & (original description: Putative , Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF00098)' T '35.2' 'not assigned.unknown' 'niben044scf00009745ctg001_1-2103' ' no hits & (original description: Putative glysoja_046371, Description = Myb/SANT-like DNA-binding domain protein, PFAM = PF13837)' T '35.2' 'not assigned.unknown' 'niben044scf00009745ctg018_518-5445' '(at5g48720 : 190.0) Encodes XRI1 (X-ray induced 1). Required for post-meiotic stages of pollen development and male and female meiosis. Maybe required for meiotic DNA repair. Inducible by X-ray. Homozygous xri1 mutants are sterile due to extensive chromosome fragmentation.; X-RAY INDUCED TRANSCRIPT 1 (XRI1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: DNA repair, female meiosis, response to X-ray, pollen development, male meiosis; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01990.1); Has 123 Blast hits to 123 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 380.0) & (original description: Putative XRI1, Description = Protein XRI1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00009751ctg019_22189-24243' ' no hits & (original description: Putative PGSC0003DMG400012181, Description = , PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'niben044scf00009780ctg009_2045-4535' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00009801ctg015_7710-14625' '(gnl|cdd|68069 : 226.0) no description available & (at2g24070 : 197.0) Family of unknown function (DUF566) ; LOCATED IN: chloroplast; EXPRESSED IN: shoot apex, inflorescence meristem, root, flower, carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 (InterPro:IPR007573); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) (TAIR:AT4G30710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative QWRF4, Description = QWRF motif-containing protein 4, PFAM = PF04484)' T '35.2' 'not assigned.unknown' 'niben044scf00009810ctg026_4631-11669' '(at2g42670 : 343.0) Protein of unknown function (DUF1637); FUNCTIONS IN: cysteamine dioxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1637 (InterPro:IPR012864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1637) (TAIR:AT3G58670.3); Has 366 Blast hits to 366 proteins in 96 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|39482 : 303.0) no description available & (gnl|cdd|71286 : 301.0) no description available & (reliability: 686.0) & (original description: Putative PCO4, Description = Plant cysteine oxidase 4, PFAM = PF07847)' T '35.2' 'not assigned.unknown' 'niben044scf00009838ctg006_15727-18235' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00009845ctg014_199-5306' ' no hits & (original description: Putative , Description = ATP synthase subunit epsilon, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00009849ctg017_951-4151' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'niben044scf00009867ctg006_6580-24188' '(at4g06676 : 394.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Etoposide-induced 2.4 (InterPro:IPR009890); Has 261 Blast hits to 259 proteins in 97 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 16; Plants - 81; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|70719 : 107.0) no description available & (gnl|cdd|39169 : 106.0) no description available & (reliability: 788.0) & (original description: Putative At4g06676, Description = Protein EI24 homolog, PFAM = PF07264)' T '35.2' 'not assigned.unknown' 'niben044scf00009883ctg005_28085-30681' ' no hits & (original description: Putative , Description = PIF-like transposase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00009887ctg003_4833-8017' ' no hits & (original description: Putative PGSC0003DMG400014583, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00009893ctg006_23130-31267' '(at4g30790 : 871.0) INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 17 (InterPro:IPR007240), Autophagy-related protein 11 (InterPro:IPR019460); Has 8793 Blast hits to 6268 proteins in 570 species: Archae - 89; Bacteria - 657; Metazoa - 4844; Fungi - 808; Plants - 441; Viruses - 15; Other Eukaryotes - 1939 (source: NCBI BLink). & (reliability: 1742.0) & (original description: Putative ATG11, Description = Autophagy-related protein 11, PFAM = PF04108;PF04108)' T '35.2' 'not assigned.unknown' 'niben044scf00009893ctg007_1338-3906' '(at4g30790 : 242.0) INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 17 (InterPro:IPR007240), Autophagy-related protein 11 (InterPro:IPR019460); Has 8793 Blast hits to 6268 proteins in 570 species: Archae - 89; Bacteria - 657; Metazoa - 4844; Fungi - 808; Plants - 441; Viruses - 15; Other Eukaryotes - 1939 (source: NCBI BLink). & (reliability: 484.0) & (original description: Putative ATG11, Description = Autophagy-related protein 11, PFAM = PF10377)' T '35.2' 'not assigned.unknown' 'niben044scf00009901ctg026_6470-8917' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00009904ctg010_1-1260' ' (original description: Putative , Description = , PFAM = PF03108;PF10551)' T '35.2' 'not assigned.unknown' 'niben044scf00009917ctg002_1484-11334' ' no hits & (original description: Putative PGSC0003DMG400001461, Description = Putative G3BP-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00009942ctg010_1-4272' '(at2g46540 : 83.6) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; Has 42 Blast hits to 42 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative PGSC0003DMG400000233, Description = Fiber protein Fb11, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00009944ctg005_48868-53712' '(at4g28260 : 397.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 50 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 794.0) & (original description: Putative Os10g0500600, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00009986ctg008_342-7185' '(at2g44640 : 468.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plasma membrane, plastid, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3769 (InterPro:IPR022244); BEST Arabidopsis thaliana protein match is: pigment defective 320 (TAIR:AT3G06960.1); Has 49 Blast hits to 48 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 936.0) & (original description: Putative At2g44640, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00009994ctg011_1-1134' ' no hits & (original description: Putative str246N, Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00009996ctg014_8062-11398' ' no hits & (original description: Putative , Description = Precursor of thiamin-binding protein, PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'niben044scf00009996ctg023_687-2971' ' no hits & (original description: Putative , Description = Retrovirus-related Pol polyprotein from transposon 297 family, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00010002ctg000_1-4820' ' no hits & (original description: Putative rps21, Description = 30S ribosomal protein S21, chloroplastic, PFAM = PF01165)' T '35.2' 'not assigned.unknown' 'niben044scf00010017ctg001_1-1644' ' no hits & (original description: Putative Tgt1ORF2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00010020ctg000_48993-52475' '(at5g21970 : 478.0) Ubiquitin carboxyl-terminal hydrolase family protein; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant (InterPro:IPR021099); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein (TAIR:AT4G01037.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 956.0) & (original description: Putative At5g21970, Description = Expressed protein, PFAM = PF11955)' T '35.2' 'not assigned.unknown' 'niben044scf00010024ctg002_16998-18557' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00010049ctg002_2179-4754' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben044scf00010069ctg000_3792-7083' ' no hits & (original description: Putative , Description = F5M15.26, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00010116ctg001_754-4086' ' no hits & (original description: Putative , Description = , PFAM = PF00403)' T '35.2' 'not assigned.unknown' 'niben044scf00010124ctg013_2292-9143' '(at2g25730 : 572.0) unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages. & (reliability: 1144.0) & (original description: Putative , Description = Zinc finger FYVE domain-containing protein 26 isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00010124ctg020_2834-8521' ' no hits & (original description: Putative PGSC0003DMG400014491, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00010135ctg006_11089-13522' '(at2g01300 : 125.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15010.1); Has 73 Blast hits to 73 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative At2g01300, Description = Predicted by genscan and genefinder, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00010167ctg013_13715-20904' '(at1g74160 : 305.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G18620.1); Has 3407 Blast hits to 2217 proteins in 314 species: Archae - 0; Bacteria - 264; Metazoa - 1296; Fungi - 318; Plants - 346; Viruses - 34; Other Eukaryotes - 1149 (source: NCBI BLink). & (reliability: 610.0) & (original description: Putative PGSC0003DMG400001462, Description = , PFAM = PF14309)' T '35.2' 'not assigned.unknown' 'niben044scf00010192ctg004_19972-22421' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00010196ctg001_19374-22381' '(at1g31130 : 116.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 246 Blast hits to 244 proteins in 29 species: Archae - 2; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 222; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative ORF, Description = Putative uncharacterized protein ORF, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00010213ctg004_11191-13913' ' (original description: Putative MTR_1g092960, Description = PIF1-like helicase, PFAM = PF05970)' T '35.2' 'not assigned.unknown' 'niben044scf00010221ctg000_177-2908' ' no hits & (original description: Putative PGSC0003DMG400003969, Description = , PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'niben044scf00010232ctg009_752-6771' '(at2g37210 : 330.0) Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At5g11950.; lysine decarboxylase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: Putative lysine decarboxylase family protein (TAIR:AT3G53450.1). & (gnl|cdd|86394 : 192.0) no description available & (reliability: 660.0) & (original description: Putative LOG1, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1, PFAM = PF03641)' T '35.2' 'not assigned.unknown' 'niben044scf00010256ctg001_1-4438' '(at5g17910 : 278.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29620.1). & (reliability: 556.0) & (original description: Putative At2g29620, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00010338ctg012_2324-3980' ' no hits & (original description: Putative , Description = , PFAM = PF05699)' T '35.2' 'not assigned.unknown' 'niben044scf00010364ctg006_1-6682' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00010366ctg029_11377-18658' '(at2g43630 : 136.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, nucleus, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G59640.2); Has 67 Blast hits to 67 proteins in 20 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 1; Plants - 49; Viruses - 2; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative TCM_041392, Description = Chloroplast, nucleus, chloroplast envelope, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00010366ctg042_4851-7768' '(at4g39690 : 150.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane protein Mitofilin (InterPro:IPR019133); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative At4g39690, Description = Formation of crista junctions protein 1, PFAM = PF09731)' T '35.2' 'not assigned.unknown' 'niben044scf00010383ctg014_524-7821' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00010383ctg014_7504-10496' ' no hits & (original description: Putative , Description = Zinc finger containing preotein, putative, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben044scf00010408ctg004_1562-11576' '(at3g62140 : 149.0) CONTAINS InterPro DOMAIN/s: NEFA-interacting nuclear protein NIP30, N-terminal (InterPro:IPR019331); Has 398 Blast hits to 395 proteins in 139 species: Archae - 0; Bacteria - 6; Metazoa - 193; Fungi - 83; Plants - 36; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative BnaC06g18360D, Description = BnaC06g18360D protein, PFAM = PF10187)' T '35.2' 'not assigned.unknown' 'niben044scf00010423ctg014_1002-4535' ' no hits & (original description: Putative PGSC0003DMG400007384, Description = EG45-like domain containing protein, PFAM = PF03330)' T '35.2' 'not assigned.unknown' 'niben044scf00010424ctg004_43873-45300' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00010478ctg016_3073-5692' ' (original description: Putative pol, Description = Reverse transcriptase, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00010499ctg014_7057-9587' ' (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00010499ctg015_1158-3541' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00010522ctg009_3934-7100' '(at4g20010 : 230.0) plastid transcriptionally active 9 (PTAC9); FUNCTIONS IN: single-stranded DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plastid chromosome, nucleoid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Primosome PriB/single-strand DNA-binding (InterPro:IPR000424); BEST Arabidopsis thaliana protein match is: organellar single-stranded DNA binding protein 3 (TAIR:AT5G44785.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative PTAC9, Description = , PFAM = PF00436)' T '35.2' 'not assigned.unknown' 'niben044scf00010538ctg002_1131-4431' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00010548ctg001_2571-4580' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00010548ctg002_1-8408' '(at1g77620 : 177.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding; INVOLVED IN: DNA repair, cell cycle; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Checkpoint protein Rad24 (InterPro:IPR004582), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: replication factor C1 (TAIR:AT5G22010.1); Has 1511 Blast hits to 1466 proteins in 328 species: Archae - 281; Bacteria - 0; Metazoa - 363; Fungi - 421; Plants - 133; Viruses - 9; Other Eukaryotes - 304 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative BnaCnng11360D, Description = BnaCnng11360D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00010574ctg003_19947-26845' '(at1g13310 : 276.0) Endosomal targeting BRO1-like domain-containing protein; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86235 : 85.7) no description available & (reliability: 552.0) & (original description: Putative BnaA08g24330D, Description = BnaA08g24330D protein, PFAM = PF03097)' T '35.2' 'not assigned.unknown' 'niben044scf00010588ctg014_8104-10472' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Glutathione reductase, cytosolic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00010590ctg008_1-1448' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00010608ctg014_8958-10452' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00010622ctg012_1-5576' '(at4g29400 : 345.0) Protein of unknown function (DUF3531); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3531 (InterPro:IPR021920); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3531) (TAIR:AT5G08400.2); Has 315 Blast hits to 315 proteins in 83 species: Archae - 0; Bacteria - 120; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 690.0) & (original description: Putative F383_09136, Description = Dna-directed rna polymerase i subunit rpa2, PFAM = PF12049)' T '35.2' 'not assigned.unknown' 'niben044scf00010625ctg001_1642-4879' '(at1g43245 : 113.0) SET domain-containing protein; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00010629ctg009_531-3341' ' no hits & (original description: Putative , Description = , PFAM = PF13952)' T '35.2' 'not assigned.unknown' 'niben044scf00010661ctg004_1-1309' ' no hits & (original description: Putative BA4, Description = Polyprotein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00010692ctg002_349-3530' ' no hits & (original description: Putative PGSC0003DMG401030137, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00010707ctg006_3257-5482' ' no hits & (original description: Putative , Description = , PFAM = PF06839)' T '35.2' 'not assigned.unknown' 'niben044scf00010709ctg007_2053-6086' '(at1g36310 : 420.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36545 : 227.0) no description available & (reliability: 840.0) & (original description: Putative Sb04g027790, Description = Putative uncharacterized protein Sb04g027790, PFAM = PF08241)' T '35.2' 'not assigned.unknown' 'niben044scf00010709ctg007_2141-6108' '(at1g36310 : 372.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36545 : 216.0) no description available & (reliability: 744.0) & (original description: Putative alkbh8, Description = Alkylated DNA repair protein alkB-like protein 8, PFAM = PF08241)' T '35.2' 'not assigned.unknown' 'niben044scf00010732ctg015_1-528' ' (original description: Putative X777_02823, Description = Copia protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00010738ctg005_10214-12761' ' no hits & (original description: Putative Os10g0106900, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben044scf00010747ctg000_2415-4744' ' no hits & (original description: Putative PGSC0003DMG400045123, Description = Zinc finger containing preotein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00010755ctg012_9453-15312' ' no hits & (original description: Putative , Description = Putative chromatin structure-remodeling complex protein SYD-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00010755ctg016_12183-14314' ' no hits & (original description: Putative psaJ, Description = Photosystem I reaction center subunit IX, PFAM = PF01701)' T '35.2' 'not assigned.unknown' 'niben044scf00010769ctg002_11047-15134' ' (original description: Putative HRGPNT3, Description = DNA-directed RNA polymerase subunit, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00010783ctg003_1883-19115' ' no hits & (original description: Putative , Description = , PFAM = PF04535)' T '35.2' 'not assigned.unknown' 'niben044scf00010787ctg014_4302-15114' '(at5g47380 : 554.0) Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT5G66600.3); Has 575 Blast hits to 559 proteins in 76 species: Archae - 2; Bacteria - 39; Metazoa - 40; Fungi - 0; Plants - 462; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|68359 : 167.0) no description available & (reliability: 1108.0) & (original description: Putative BnaA09g18270D, Description = BnaA09g18270D protein, PFAM = PF14389;PF04784)' T '35.2' 'not assigned.unknown' 'niben044scf00010832ctg003_6739-9329' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00010837ctg014_2577-9390' '(at4g32330 : 145.0) TPX2 (targeting protein for Xklp2) protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT2G25480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative F4I4, Description = TPX2 (Targeting protein for Xklp2) family protein, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'niben044scf00010860ctg004_4655-11515' '(at3g03773 : 160.0) HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT4G02450.2); Has 706 Blast hits to 706 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 339; Fungi - 125; Plants - 130; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|38368 : 84.2) no description available & (reliability: 320.0) & (original description: Putative At3g03773, Description = p23 co-chaperone protein, PFAM = PF04969)' T '35.2' 'not assigned.unknown' 'niben044scf00010864ctg001_2954-10762' '(at2g19950 : 282.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC1 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (558-715 aa) portion of the protein.; golgin candidate 1 (GC1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus; CONTAINS InterPro DOMAIN/s: Golgin subfamily A member 5 (InterPro:IPR019177); BEST Arabidopsis thaliana protein match is: golgin candidate 2 (TAIR:AT1G18190.1). & (q5jly8|goga5_orysa : 255.0) Golgin-84 - Oryza sativa (Rice) & (reliability: 564.0) & (original description: Putative GC1, Description = Golgin-84, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00010877ctg001_5991-9882' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00010880ctg018_6607-7938' ' no hits & (original description: Putative str246N, Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00010880ctg025_11178-13780' ' (original description: Putative ATF2, Description = Ethylene-responsive transcription factor 3, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'niben044scf00010885ctg005_6309-8755' '(gnl|cdd|70036 : 163.0) no description available & (at1g74730 : 117.0) Protein of unknown function (DUF1118); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1118 (InterPro:IPR009500); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1118) (TAIR:AT5G08050.1); Has 78 Blast hits to 78 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative MicEmUP1, Description = BnaC06g35550D protein, PFAM = PF06549)' T '35.2' 'not assigned.unknown' 'niben044scf00010943ctg007_669-3161' '(at5g16940 : 187.0) carbon-sulfur lyases; FUNCTIONS IN: carbon-sulfur lyase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutathione-dependent formaldehyde-activating, GFA (InterPro:IPR006913); Has 2298 Blast hits to 2296 proteins in 492 species: Archae - 0; Bacteria - 969; Metazoa - 67; Fungi - 56; Plants - 42; Viruses - 0; Other Eukaryotes - 1164 (source: NCBI BLink). & (gnl|cdd|39394 : 149.0) no description available & (reliability: 374.0) & (original description: Putative ORF1, Description = Putative integron gene cassette protein, PFAM = PF04828)' T '35.2' 'not assigned.unknown' 'niben044scf00010950ctg036_877-3223' '(atmg00300 : 99.0) hypothetical protein; Gag-Pol-related retrotransposon family protein. & (reliability: 198.0) & (original description: Putative At2g21310, Description = Retrotransposon protein, putative, Ty1-copia subclass, PFAM = PF13976)' T '35.2' 'not assigned.unknown' 'niben044scf00010956ctg015_1288-3733' ' no hits & (original description: Putative , Description = Clathrin light chain, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00010967ctg012_17136-18643' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00010977ctg006_14137-21203' ' no hits & (original description: Putative TPR8, Description = Small glutamine-rich tetratricopeptide repeat-containing beta, PFAM = PF16546)' T '35.2' 'not assigned.unknown' 'niben044scf00010981ctg000_1136-7872' '(at3g18440 : 506.0) Belongs to the aluminum-activated malate transporter family. Encodes a vacuolar malate channel. Expressed in all parts of plants. Almost exclusively expressed in mesophyll cells of leaves.; aluminum-activated malate transporter 9 (ALMT9); CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G18420.1); Has 814 Blast hits to 808 proteins in 259 species: Archae - 0; Bacteria - 440; Metazoa - 0; Fungi - 20; Plants - 338; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|39909 : 409.0) no description available & (gnl|cdd|85194 : 123.0) no description available & (reliability: 1012.0) & (original description: Putative ALMT9, Description = Aluminum-activated malate transporter 9, PFAM = PF11744)' T '35.2' 'not assigned.unknown' 'niben044scf00010990ctg002_4462-8714' '(at5g21160 : 298.0) LA RNA-binding protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Protein of unknown function DM15 (InterPro:IPR006607); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT4G35890.1). & (reliability: 596.0) & (original description: Putative larp, Description = La-related protein 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00010990ctg003_1352-9044' '(at5g21160 : 163.0) LA RNA-binding protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Protein of unknown function DM15 (InterPro:IPR006607); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT4G35890.1). & (gnl|cdd|47984 : 101.0) no description available & (reliability: 326.0) & (original description: Putative , Description = Lupus la ribonucleoprotein, putative isoform 1, PFAM = PF05383)' T '35.2' 'not assigned.unknown' 'niben044scf00011020ctg002_1-1938' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00011022ctg008_25016-26716' ' (original description: Putative ap2, Description = Ethylene response factor, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'niben044scf00011039ctg004_32673-34975' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00011045ctg017_533-12922' '(at2g30700 : 519.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G61900.1); Has 68 Blast hits to 67 proteins in 13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1038.0) & (original description: Putative At1g61900, Description = Uncharacterized GPI-anchored protein At1g61900, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00011061ctg019_3033-6884' ' no hits & (original description: Putative F383_04392, Description = DNA-directed RNA polymerase subunit beta, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00011072ctg006_1-2474' ' no hits & (original description: Putative glysoja_005430, Description = U-box domain-containing protein 33, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00011117ctg011_1207-4348' ' no hits & (original description: Putative PGSC0003DMG400006296, Description = , PFAM = PF03754)' T '35.2' 'not assigned.unknown' 'niben044scf00011128ctg004_4049-6646' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00011130ctg000_1785-4318' ' no hits & (original description: Putative , Description = , PFAM = PF03732)' T '35.2' 'not assigned.unknown' 'niben044scf00011134ctg026_596-3040' ' no hits & (original description: Putative PGSC0003DMG400013171, Description = Putative ovule protein, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00011136ctg008_1-4584' ' no hits & (original description: Putative PGSC0003DMG400016690, Description = Aminotransferase-like, plant mobile domain-containing protein, PFAM = PF10536;PF00505)' T '35.2' 'not assigned.unknown' 'niben044scf00011216ctg006_3770-8492' ' no hits & (original description: Putative BnaC03g21420D, Description = BnaC03g21420D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00011216ctg008_1-3132' ' no hits & (original description: Putative PGSC0003DMG400004043, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00011234ctg017_9782-14252' '(at5g13100 : 440.0) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 880.0) & (original description: Putative , Description = Glucose-6-phosphate 1-dehydrogenase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00011292ctg012_1-13186' '(at3g57570 : 270.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024). & (reliability: 540.0) & (original description: Putative , Description = Armadillo-like helical, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00011293ctg013_1-1968' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00011304ctg001_1643-4215' ' no hits & (original description: Putative PGSC0003DMG400035476, Description = , PFAM = PF00319)' T '35.2' 'not assigned.unknown' 'niben044scf00011315ctg016_16706-19100' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00011316ctg015_1-573' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00011342ctg004_745-6385' '(at5g24690 : 538.0) INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: reticulata-related 1 (TAIR:AT5G22790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1076.0) & (original description: Putative PHYPADRAFT_126040, Description = Predicted protein, PFAM = PF11891)' T '35.2' 'not assigned.unknown' 'niben044scf00011364ctg001_3014-6452' ' no hits & (original description: Putative PED2, Description = Peroxisomal membrane protein PEX14, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00011391ctg005_2349-5769' '(at5g62170 : 213.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G51850.1); Has 381 Blast hits to 359 proteins in 81 species: Archae - 0; Bacteria - 16; Metazoa - 101; Fungi - 21; Plants - 99; Viruses - 3; Other Eukaryotes - 141 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative F383_01476, Description = Anhydro-N-acetylmuramic acid kinase, PFAM = PF14309;PF14383)' T '35.2' 'not assigned.unknown' 'niben044scf00011419ctg019_2490-5129' '(at5g25540 : 81.3) Expressed protein contains PAM2 PABC interacting domain.; CTC-interacting domain 6 (CID6); CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 5 (TAIR:AT5G11440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00011427ctg004_10508-20960' '(at3g01780 : 1798.0) Encodes TPLATE, a cytokinesis protein targeted to the cell plate. Functions in vesicle-trafficking events required for site-specific cell wall modifications during pollen germination and for anchoring of the cell plate to the mother wall at the correct cortical position.; TPLATE; FUNCTIONS IN: binding; INVOLVED IN: pollen development, cytokinesis; LOCATED IN: nucleus, plasma membrane, cell plate, cytoplasm, phragmoplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 18574 Blast hits to 8761 proteins in 652 species: Archae - 63; Bacteria - 685; Metazoa - 7555; Fungi - 1758; Plants - 703; Viruses - 446; Other Eukaryotes - 7364 (source: NCBI BLink). & (reliability: 3596.0) & (original description: Putative TPLATE, Description = Protein TPLATE, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00011430ctg014_1-5066' ' no hits & (original description: Putative PGSC0003DMG400012162, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00011480ctg012_13227-19215' '(at3g11760 : 294.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 588.0) & (original description: Putative At5g04860, Description = Multidrug and toxic compound extrusion protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00011498ctg010_238-2551' ' (original description: Putative , Description = Reverse transcriptase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00011509ctg028_6724-12123' '(at1g11940 : 274.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT1G62305.1); Has 575 Blast hits to 575 proteins in 19 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 548; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|86287 : 259.0) no description available & (reliability: 548.0) & (original description: Putative TCM_030284, Description = Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein isoform 4, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben044scf00011509ctg029_1-1941' '(at1g62305 : 169.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT1G11940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86287 : 110.0) no description available & (reliability: 338.0) & (original description: Putative PGSC0003DMG400016437, Description = Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben044scf00011520ctg014_4189-9327' '(at5g24170 : 164.0) Got1/Sft2-like vescicle transport protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Got1/SFT2-like (InterPro:IPR007305), Vesicle transport protein, SFT2-like (InterPro:IPR011691); BEST Arabidopsis thaliana protein match is: Got1/Sft2-like vescicle transport protein family (TAIR:AT5G23550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38098 : 143.0) no description available & (gnl|cdd|71211 : 104.0) no description available & (reliability: 328.0) & (original description: Putative Os01g0219100, Description = Os01g0219100 protein, PFAM = PF04178)' T '35.2' 'not assigned.unknown' 'niben044scf00011556ctg005_4150-10146' '(at3g45750 : 336.0) Nucleotidyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT3G45760.1). & (gnl|cdd|37488 : 151.0) no description available & (gnl|cdd|34857 : 82.7) no description available & (reliability: 672.0) & (original description: Putative At3g45750, Description = Nucleotidyltransferase family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00011592ctg013_474-3843' '(at1g29050 : 219.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 38 (TBL38); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 37 (TAIR:AT2G34070.1); Has 1347 Blast hits to 1329 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1344; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|72785 : 183.0) no description available & (reliability: 438.0) & (original description: Putative gal2, Description = Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein, PFAM = PF13839;PF13839)' T '35.2' 'not assigned.unknown' 'niben044scf00011621ctg008_12160-14596' ' no hits & (original description: Putative TCM_045071, Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, putative, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'niben044scf00011672ctg001_6779-9433' ' no hits & (original description: Putative glysoja_049590, Description = Retrotransposon gag protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00011679ctg000_844-2326' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00011686ctg005_14210-15859' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Putative reverse transcriptase family member, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00011691ctg019_17503-19898' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben044scf00011717ctg001_13183-25294' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00011764ctg008_7636-10012' '(at2g25737 : 111.0) Sulfite exporter TauE/SafE family protein; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF81 (InterPro:IPR002781); BEST Arabidopsis thaliana protein match is: Sulfite exporter TauE/SafE family protein (TAIR:AT2G36630.1); Has 3417 Blast hits to 2961 proteins in 724 species: Archae - 129; Bacteria - 1927; Metazoa - 0; Fungi - 0; Plants - 198; Viruses - 0; Other Eukaryotes - 1163 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative At2g25740, Description = Sulfite exporter TauE/SafE family protein, PFAM = PF01925)' T '35.2' 'not assigned.unknown' 'niben044scf00011790ctg001_2936-7770' '(at1g29820 : 335.0) Magnesium transporter CorA-like family protein; FUNCTIONS IN: metal ion transmembrane transporter activity; INVOLVED IN: metal ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); BEST Arabidopsis thaliana protein match is: Magnesium transporter CorA-like family protein (TAIR:AT1G29830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 670.0) & (original description: Putative PGSC0003DMG400021242, Description = Magnesium transporter CorA-like family protein, PFAM = PF01544)' T '35.2' 'not assigned.unknown' 'niben044scf00011854ctg001_21407-23899' ' no hits & (original description: Putative glysoja_044932, Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00011871ctg015_128-2713' '(at1g10490 : 163.0) CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1726 (InterPro:IPR013562), Domain of unknown function DUF699, exodeoxyribonuclease V alpha chain (InterPro:IPR007807); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF1726) ;Putative ATPase (DUF699) (TAIR:AT3G57940.1); Has 1351 Blast hits to 1310 proteins in 616 species: Archae - 139; Bacteria - 698; Metazoa - 170; Fungi - 143; Plants - 51; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|37247 : 129.0) no description available & (reliability: 326.0) & (original description: Putative At1g10490, Description = UPF0202 plant-like protein, PFAM = PF13725)' T '35.2' 'not assigned.unknown' 'niben044scf00011877ctg028_403-3777' ' no hits & (original description: Putative , Description = Translation initiation factor eIF-2B delta subunit, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00011885ctg005_1-3534' '(at5g39430 : 420.0) Protein of unknown function (DUF1336); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT3G29180.2); Has 313 Blast hits to 313 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 267; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|70520 : 273.0) no description available & (reliability: 840.0) & (original description: Putative CW14, Description = AT3G29180 protein, PFAM = PF07059)' T '35.2' 'not assigned.unknown' 'niben044scf00011904ctg020_27165-34160' '(at4g08330 : 144.0) unknown protein. & (reliability: 288.0) & (original description: Putative At4g08330, Description = Uncharacterized protein At4g08330, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00011922ctg002_1-4495' '(at3g24180 : 290.0) Beta-glucosidase, GBA2 type family protein; FUNCTIONS IN: glucosylceramidase activity, catalytic activity; INVOLVED IN: glucosylceramide catabolic process, sphingolipid metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glucosylceramidase (InterPro:IPR006775), Six-hairpin glycosidase-like (InterPro:IPR008928), Beta-glucosidase, GBA2 type (InterPro:IPR014551); BEST Arabidopsis thaliana protein match is: Beta-glucosidase, GBA2 type family protein (TAIR:AT5G49900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37330 : 172.0) no description available & (reliability: 580.0) & (original description: Putative At3g24180, Description = Non-lysosomal glucosylceramidase, PFAM = PF12215)' T '35.2' 'not assigned.unknown' 'niben044scf00011957ctg003_1-1988' ' (original description: Putative LgRT4, Description = Reverse transcriptases, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00011972ctg055_1-1867' ' no hits & (original description: Putative PGSC0003DMG400021339, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00011984ctg006_3156-7090' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00011998ctg011_1909-5177' ' (original description: Putative STK, Description = Storekeeper protein, PFAM = PF04504)' T '35.2' 'not assigned.unknown' 'niben044scf00012030ctg001_393-3975' '(at4g39840 : 309.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 20719 Blast hits to 6096 proteins in 607 species: Archae - 22; Bacteria - 3243; Metazoa - 4364; Fungi - 2270; Plants - 237; Viruses - 128; Other Eukaryotes - 10455 (source: NCBI BLink). & (reliability: 618.0) & (original description: Putative BnaA01g34680D, Description = BnaA01g34680D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00012047ctg013_969-6626' '(at1g14770 : 85.9) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G68030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative PGSC0003DMG400011962, Description = PHD-finger protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00012063ctg008_11043-14575' '(at5g01710 : 677.0) methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Methyltransferase FkbM (InterPro:IPR006342), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1354.0) & (original description: Putative BnaC03g00080D, Description = BnaC03g00080D protein, PFAM = PF08241)' T '35.2' 'not assigned.unknown' 'niben044scf00012071ctg007_183-8192' '(at5g06220 : 159.0) LETM1-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: LETM1-like (InterPro:IPR011685); BEST Arabidopsis thaliana protein match is: LETM1-like protein (TAIR:AT3G11560.4). & (reliability: 318.0) & (original description: Putative PGSC0003DMG400016500, Description = LETM1 and EF-hand domain-containing protein anon-60Da isoform 1, PFAM = PF07766)' T '35.2' 'not assigned.unknown' 'niben044scf00012084ctg002_1017-4413' '(at1g10522 : 200.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 400.0) & (original description: Putative At1g10522, Description = At1g10522, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00012115ctg004_40028-50336' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00012118ctg012_8641-13771' '(at2g35140 : 150.0) DCD (Development and Cell Death) domain protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.2); Has 307 Blast hits to 293 proteins in 25 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative Os09g0563700, Description = Os09g0563700 protein, PFAM = PF10539)' T '35.2' 'not assigned.unknown' 'niben044scf00012133ctg005_7385-14779' '(at1g53760 : 308.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2343 (InterPro:IPR018786). & (gnl|cdd|39739 : 209.0) no description available & (reliability: 616.0) & (original description: Putative BnaC06g10300D, Description = BnaC06g10300D protein, PFAM = PF10173)' T '35.2' 'not assigned.unknown' 'niben044scf00012166ctg000_935-5886' '(at5g47740 : 164.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT2G45910.1). & (gnl|cdd|30176 : 85.3) no description available & (reliability: 328.0) & (original description: Putative BnaC02g33490D, Description = BnaC02g33490D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00012174ctg010_2173-5134' ' no hits & (original description: Putative PGSC0003DMG400045123, Description = Zinc finger containing preotein, putative, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben044scf00012179ctg001_1-4746' '(at5g36290 : 221.0) Uncharacterized protein family (UPF0016); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0016 (InterPro:IPR001727); BEST Arabidopsis thaliana protein match is: Uncharacterized protein family (UPF0016) (TAIR:AT1G25520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38092 : 156.0) no description available & (reliability: 442.0) & (original description: Putative TM165, Description = GDT1-like protein 3, PFAM = PF01169)' T '35.2' 'not assigned.unknown' 'niben044scf00012180ctg016_2805-6141' ' no hits & (original description: Putative At3g04500, Description = RNA-binding protein 42, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00012193ctg001_6085-11248' '(at2g27590 : 473.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Has 109 Blast hits to 109 proteins in 24 species: Archae - 0; Bacteria - 26; Metazoa - 0; Fungi - 2; Plants - 33; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 946.0) & (original description: Putative At2g27590, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00012250ctg005_1-1892' ' no hits & (original description: Putative psbZ, Description = Photosystem II reaction center protein Z, PFAM = PF01737)' T '35.2' 'not assigned.unknown' 'niben044scf00012287ctg002_25131-29315' '(at1g80940 : 197.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative ski1, Description = Snf1-related kinase interactor 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00012294ctg001_36731-42256' '(at5g13310 : 85.5) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00012300ctg000_1-13227' '(at5g54440 : 1574.0) Encodes a putative TRAPPII tethering factor required for cell plate assembly during cytokinesis.; CLUB (CLUB); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3758 (InterPro:IPR022233); Has 362 Blast hits to 266 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 146; Fungi - 118; Plants - 63; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|37142 : 689.0) no description available & (reliability: 3148.0) & (original description: Putative TRS130, Description = Trafficking protein particle complex II-specific subunit 130 homolog, PFAM = PF12584;PF11817)' T '35.2' 'not assigned.unknown' 'niben044scf00012304ctg008_1-7492' '(at3g15150 : 154.0) Encodes a SUMO E3 ligase that regulates endocycle onset and meristem maintenance.; HIGH PLOIDY2 (HPY2); Has 268 Blast hits to 268 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 53; Plants - 46; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative HPY2, Description = E3 SUMO-protein ligase MMS21, PFAM = PF11789)' T '35.2' 'not assigned.unknown' 'niben044scf00012311ctg008_1213-3998' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00012381ctg003_929-5047' '(at5g02770 : 90.1) unknown protein; Has 469 Blast hits to 336 proteins in 126 species: Archae - 0; Bacteria - 54; Metazoa - 249; Fungi - 22; Plants - 47; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative umc1479, Description = SAP domain-containing ribonucleoprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00012382ctg003_12153-19345' ' no hits & (original description: Putative PGSC0003DMG401018585, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00012467ctg036_1-1239' ' (original description: Putative pol, Description = Reverse transcriptase, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00012515ctg000_1-1722' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00012532ctg007_19775-26280' '(at5g66600 : 610.0) Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT2G23700.1). & (gnl|cdd|68359 : 207.0) no description available & (reliability: 1220.0) & (original description: Putative Os03g0769000, Description = Os03g0769000 protein, PFAM = PF04784;PF14389)' T '35.2' 'not assigned.unknown' 'niben044scf00012533ctg010_5818-8222' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben044scf00012535ctg028_17922-20620' ' no hits & (original description: Putative , Description = Transposase, PFAM = PF13359)' T '35.2' 'not assigned.unknown' 'niben044scf00012538ctg007_8492-10837' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00012540ctg002_3114-5079' ' no hits & (original description: Putative AHL1, Description = DNA-binding family protein, PFAM = PF03479)' T '35.2' 'not assigned.unknown' 'niben044scf00012547ctg006_2598-12238' '(at1g64570 : 397.0) DUO POLLEN 3 (DUO3); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057); Has 1836 Blast hits to 1575 proteins in 289 species: Archae - 4; Bacteria - 248; Metazoa - 589; Fungi - 287; Plants - 112; Viruses - 46; Other Eukaryotes - 550 (source: NCBI BLink). & (reliability: 794.0) & (original description: Putative DUO3, Description = DUO pollen 3-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00012562ctg012_1-1615' '(at3g14830 : 207.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53450.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative , Description = ATP-dependent helicase/nuclease subunit A, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00012589ctg004_1-4457' '(at3g11590 : 417.0) unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22310.1); Has 22320 Blast hits to 15179 proteins in 1213 species: Archae - 372; Bacteria - 2307; Metazoa - 10906; Fungi - 1700; Plants - 1146; Viruses - 65; Other Eukaryotes - 5824 (source: NCBI BLink). & (reliability: 834.0) & (original description: Putative F24K9.26, Description = At3g11590/F24K9_26, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00012609ctg011_1-2420' ' no hits & (original description: Putative PGSC0003DMG400005657, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00012611ctg007_1198-4437' ' no hits & (original description: Putative SDM1_53t00017, Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben044scf00012613ctg012_4329-6667' ' no hits & (original description: Putative PGSC0003DMG400014888, Description = RNase H family protein, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'niben044scf00012615ctg004_12144-19811' '(at3g44330 : 245.0) INVOLVED IN: protein processing; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicalin (InterPro:IPR016574), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Nicastrin (InterPro:IPR008710); Has 245 Blast hits to 243 proteins in 99 species: Archae - 6; Bacteria - 10; Metazoa - 139; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|37737 : 207.0) no description available & (reliability: 490.0) & (original description: Putative At3g44330, Description = Nicalin, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00012619ctg002_1-6306' '(at3g53120 : 192.0) VPS37-1; CONTAINS InterPro DOMAIN/s: Modifier of rudimentary, Modr (InterPro:IPR009851); BEST Arabidopsis thaliana protein match is: Modifier of rudimentary (Mod(r)) protein (TAIR:AT2G36680.1); Has 448 Blast hits to 448 proteins in 101 species: Archae - 0; Bacteria - 6; Metazoa - 285; Fungi - 19; Plants - 79; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|87233 : 129.0) no description available & (gnl|cdd|38480 : 122.0) no description available & (reliability: 384.0) & (original description: Putative IDP343, Description = Modifier of rudimentary (Mod(R)) protein, PFAM = PF07200)' T '35.2' 'not assigned.unknown' 'niben044scf00012704ctg011_1321-4381' '(at2g44090 : 371.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G59910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 742.0) & (original description: Putative SKIP35, Description = Ankyrin repeat protein SKIP35, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00012711ctg003_59503-61512' ' no hits & (original description: Putative psbF, Description = Cytochrome b559 subunit beta, PFAM = PF00283)' T '35.2' 'not assigned.unknown' 'niben044scf00012728ctg004_283-3413' ' no hits & (original description: Putative LOC100272952, Description = Lyk 6, PFAM = PF01476)' T '35.2' 'not assigned.unknown' 'niben044scf00012791ctg002_1188-15024' '(at5g15680 : 3335.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37036 : 1727.0) no description available & (reliability: 6670.0) & (original description: Putative At5g15680, Description = Cell morphogenesis related protein, PFAM = PF14222;PF14228;PF14225)' T '35.2' 'not assigned.unknown' 'niben044scf00012836ctg000_1-6812' '(at5g55610 : 255.0) unknown protein; LOCATED IN: mitochondrion, plastid, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 510.0) & (original description: Putative At5g55610, Description = Putative uncharacterized protein At5g55610, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00012844ctg009_12328-16194' '(at2g20670 : 238.0) Protein of unknown function (DUF506) ; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT4G32480.1); Has 375 Blast hits to 373 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 373; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68298 : 211.0) no description available & (reliability: 476.0) & (original description: Putative At2g20670, Description = Expressed protein, PFAM = PF04720)' T '35.2' 'not assigned.unknown' 'niben044scf00012862ctg001_1-8018' ' (original description: Putative glysoja_019334, Description = KHG/KDPG aldolase, PFAM = PF01081)' T '35.2' 'not assigned.unknown' 'niben044scf00012862ctg006_31716-34096' ' no hits & (original description: Putative PGSC0003DMG400002853, Description = GCK domain protein, PFAM = PF07802)' T '35.2' 'not assigned.unknown' 'niben044scf00012869ctg006_20413-27501' '(at4g09830 : 169.0) Uncharacterised conserved protein UCP009193; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP009193 (InterPro:IPR016549); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP009193 (TAIR:AT5G64780.1); Has 86 Blast hits to 86 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative , Description = Putative nuclear receptor subfamily 2 group C member 2-like, PFAM = PF15251)' T '35.2' 'not assigned.unknown' 'niben044scf00012878ctg000_7677-10129' '(at2g20760 : 127.0) Clathrin light chain protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin light chain (InterPro:IPR000996); BEST Arabidopsis thaliana protein match is: Clathrin light chain protein (TAIR:AT2G40060.1); Has 1791 Blast hits to 1279 proteins in 282 species: Archae - 0; Bacteria - 563; Metazoa - 557; Fungi - 96; Plants - 161; Viruses - 0; Other Eukaryotes - 414 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative CLC1, Description = Clathrin light chain protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00012916ctg006_30032-35842' ' no hits & (original description: Putative PGSC0003DMG400025418, Description = DNA/RNA polymerases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00012932ctg003_1908-6096' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00012989ctg003_1192-4694' '(at3g24255 : 134.0) RNA-directed DNA polymerase (reverse transcriptase)-related family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23910.1); Has 169 Blast hits to 169 proteins in 55 species: Archae - 8; Bacteria - 18; Metazoa - 36; Fungi - 11; Plants - 53; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative PGSC0003DMG400012595, Description = Putative ovule protein, PFAM = PF00078;PF13966)' T '35.2' 'not assigned.unknown' 'niben044scf00013005ctg013_12938-16332' ' no hits & (original description: Putative PGSC0003DMG400001708, Description = Os01g0212700 protein, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben044scf00013010ctg007_5126-10695' '(at3g18440 : 445.0) Belongs to the aluminum-activated malate transporter family. Encodes a vacuolar malate channel. Expressed in all parts of plants. Almost exclusively expressed in mesophyll cells of leaves.; aluminum-activated malate transporter 9 (ALMT9); CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G18420.1); Has 814 Blast hits to 808 proteins in 259 species: Archae - 0; Bacteria - 440; Metazoa - 0; Fungi - 20; Plants - 338; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|39909 : 342.0) no description available & (reliability: 890.0) & (original description: Putative Os06g0268800, Description = Os06g0268800 protein, PFAM = PF11744)' T '35.2' 'not assigned.unknown' 'niben044scf00013043ctg000_14097-15550' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00013051ctg007_1448-3407' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00013064ctg000_17052-20599' ' no hits & (original description: Putative , Description = , PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben044scf00013071ctg017_1529-3926' ' no hits & (original description: Putative PGSC0003DMG400012566, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00013129ctg000_1894-7209' '(at1g50710 : 338.0) unknown protein; Has 109 Blast hits to 109 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 61; Fungi - 8; Plants - 36; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 676.0) & (original description: Putative 38200, Description = AUGMIN subunit 4, PFAM = PF14735;PF14735)' T '35.2' 'not assigned.unknown' 'niben044scf00013167ctg017_1-1186' '(atmg00860 : 80.1) hypothetical protein; DNA/RNA polymerases superfamily protein. & (reliability: 160.2) & (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00013187ctg008_1-1912' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Retrovirus-related Pol polyprotein LINE-1, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00013195ctg009_9437-12510' ' no hits & (original description: Putative At1g69160, Description = Protein BIG GRAIN 1-like E, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00013250ctg004_627-2944' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00013256ctg008_2613-5264' ' no hits & (original description: Putative , Description = Retrotransposon gag protein, PFAM = PF13650)' T '35.2' 'not assigned.unknown' 'niben044scf00013283ctg007_1-7828' '(at1g50120 : 160.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rgp1 (InterPro:IPR014848), Immunoglobulin E-set (InterPro:IPR014756); Has 144 Blast hits to 140 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 86; Fungi - 10; Plants - 39; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative At1g50120, Description = Putative uncharacterized protein At1g50120, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00013289ctg001_115-5220' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00013289ctg001_4616-6343' ' no hits & (original description: Putative , Description = , PFAM = PF05617)' T '35.2' 'not assigned.unknown' 'niben044scf00013320ctg001_1-1649' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00013343ctg006_2211-6253' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00013344ctg003_142-5234' '(at3g01680 : 507.0) CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1014.0) & (original description: Putative SEOc, Description = Sieve element occlusion c, PFAM = PF14577;PF14576)' T '35.2' 'not assigned.unknown' 'niben044scf00013373ctg000_2670-5191' ' no hits & (original description: Putative Tgt1ORF2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00013420ctg008_176-4868' '(at1g27290 : 114.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative BnaAnng21740D, Description = BnaAnng21740D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00013437ctg014_559-2506' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00013437ctg014_2507-4764' '(at1g21280 : 116.0) CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative At2g20460, Description = F20P5.25 protein, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben044scf00013475ctg015_1-9408' ' no hits & (original description: Putative , Description = Putative bipolar kinesin KRP-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00013500ctg001_1-7810' '(at2g38695 : 155.0) unknown protein; Has 56 Blast hits to 54 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative At2g38695, Description = Putative TY4B-Transposon Ty4-J Gag-Pol polyprotein-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00013553ctg005_1-2222' ' no hits & (original description: Putative , Description = , PFAM = PF01693;PF01693)' T '35.2' 'not assigned.unknown' 'niben044scf00013563ctg000_831-3270' '(at1g61740 : 179.0) Sulfite exporter TauE/SafE family protein; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF81 (InterPro:IPR002781); BEST Arabidopsis thaliana protein match is: Sulfite exporter TauE/SafE family protein (TAIR:AT1G11540.1); Has 2571 Blast hits to 2364 proteins in 652 species: Archae - 89; Bacteria - 1424; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 853 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative At1g61740, Description = Putative uncharacterized protein At1g61740, PFAM = PF01925)' T '35.2' 'not assigned.unknown' 'niben044scf00013584ctg002_24031-25618' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00013590ctg015_1-2926' '(gnl|cdd|37247 : 301.0) no description available & (at3g57940 : 298.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1726 (InterPro:IPR013562), Domain of unknown function DUF699, exodeoxyribonuclease V alpha chain (InterPro:IPR007807); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF1726) ;Putative ATPase (DUF699) (TAIR:AT1G10490.1). & (gnl|cdd|71783 : 134.0) no description available & (reliability: 596.0) & (original description: Putative nat10, Description = N-acetyltransferase 10, PFAM = PF08351)' T '35.2' 'not assigned.unknown' 'niben044scf00013606ctg003_1-3621' ' (original description: Putative ERF3, Description = Ethylene response factor 3, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'niben044scf00013646ctg018_5148-7290' ' no hits & (original description: Putative glysoja_003203, Description = Heavy-metal-associated domain-containing family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00013654ctg013_5213-16762' '(at4g24290 : 634.0) MAC/Perforin domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Membrane attack complex component/perforin (MACPF) domain (InterPro:IPR020864), Membrane attack complex component/perforin (MACPF) domain, metazoa (InterPro:IPR020865); BEST Arabidopsis thaliana protein match is: MAC/Perforin domain-containing protein (TAIR:AT1G28380.1); Has 264 Blast hits to 263 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 51; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 1268.0) & (original description: Putative CAD1, Description = MAC/Perforin domain-containing protein isoform 2, PFAM = PF01823)' T '35.2' 'not assigned.unknown' 'niben044scf00013675ctg024_6656-11496' '(at5g14550 : 224.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT1G11940.1); Has 576 Blast hits to 576 proteins in 20 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 546; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|86287 : 193.0) no description available & (reliability: 448.0) & (original description: Putative AT1G62305, Description = Glycosyl transferase, family 14, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben044scf00013685ctg008_1677-4300' '(at5g02740 : 123.0) Ribosomal protein S24e family protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative At5g02740, Description = At5g02740, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00013732ctg010_15228-19582' '(at4g16444 : 179.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CHD5-like protein (InterPro:IPR007514); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative BnaAnng19680D, Description = BnaAnng19680D protein, PFAM = PF04420)' T '35.2' 'not assigned.unknown' 'niben044scf00013797ctg002_16608-21320' '(at3g04780 : 230.0) Encodes a protein with little sequence identity with any other protein of known structure or function. Part of this protein shows a 42% sequence identity with the C-terminal domain of the 32-kD human thioredoxin-like protein.; CONTAINS InterPro DOMAIN/s: Thioredoxin, core (InterPro:IPR015467), Proteasome-interacting thioredoxin-like domain, C-terminal (InterPro:IPR010400); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1000) (TAIR:AT2G25950.1); Has 606 Blast hits to 606 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 245; Fungi - 186; Plants - 75; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink). & (gnl|cdd|36126 : 161.0) no description available & (gnl|cdd|87041 : 122.0) no description available & (reliability: 460.0) & (original description: Putative At3g04780, Description = Os03g0795500 protein, PFAM = PF06201)' T '35.2' 'not assigned.unknown' 'niben044scf00013822ctg004_299-2298' '(at5g66810 : 151.0) CONTAINS InterPro DOMAIN/s: CTLH, C-terminal LisH motif (InterPro:IPR006595); BEST Arabidopsis thaliana protein match is: LisH and RanBPM domains containing protein (TAIR:AT1G61150.1); Has 333 Blast hits to 242 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 47; Plants - 152; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00013827ctg001_5464-8594' '(at2g39370 : 157.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37380.1); Has 184 Blast hits to 178 proteins in 53 species: Archae - 0; Bacteria - 58; Metazoa - 9; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative MAKR4, Description = Probable membrane-associated kinase regulator 4, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00013845ctg001_7172-9858' ' no hits & (original description: Putative orf239, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00013845ctg004_25282-30398' '(at4g24200 : 228.0) Transcription elongation factor (TFIIS) family protein; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923); Has 1174 Blast hits to 562 proteins in 174 species: Archae - 0; Bacteria - 342; Metazoa - 163; Fungi - 176; Plants - 109; Viruses - 0; Other Eukaryotes - 384 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative PGSC0003DMG400029336, Description = BnaC07g38790D protein, PFAM = PF08711)' T '35.2' 'not assigned.unknown' 'niben044scf00013873ctg001_4127-8145' '(at4g32295 : 192.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24150.1); Has 34 Blast hits to 34 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative BnaC07g07420D, Description = BnaC07g07420D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00013950ctg000_3421-8507' '(at5g30490 : 117.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to 324 proteins in 149 species: Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|39973 : 87.5) no description available & (reliability: 234.0) & (original description: Putative MTR_4g123060, Description = Craniofacial development protein, PFAM = PF07572)' T '35.2' 'not assigned.unknown' 'niben044scf00014006ctg003_907-3386' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00014021ctg006_5911-8249' ' no hits & (original description: Putative TCM_019105, Description = Glutamine dumper 2, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00014043ctg002_4370-6687' ' no hits & (original description: Putative Tgt1ORF2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00014043ctg003_1010-3438' ' no hits & (original description: Putative , Description = Polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00014079ctg002_10782-12935' ' no hits & (original description: Putative PGSC0003DMG400046964, Description = , PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'niben044scf00014111ctg000_2336-7683' '(at3g28370 : 162.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51430.1); Has 6174 Blast hits to 4953 proteins in 685 species: Archae - 195; Bacteria - 792; Metazoa - 2688; Fungi - 653; Plants - 470; Viruses - 15; Other Eukaryotes - 1361 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative BnaA06g31600D, Description = BnaA06g31600D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00014112ctg003_15776-27235' '(at3g09430 : 228.0) unknown protein; Has 17 Blast hits to 17 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00014118ctg003_16779-26047' '(at1g33500 : 132.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative BnaA05g17850D, Description = BnaA05g17850D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00014166ctg012_2971-17269' '(at3g12010 : 746.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell, cultured cell; CONTAINS InterPro DOMAIN/s: Colon cancer-associated Mic1-like (InterPro:IPR009755); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37588 : 389.0) no description available & (gnl|cdd|70497 : 163.0) no description available & (reliability: 1492.0) & (original description: Putative , Description = , PFAM = PF07035)' T '35.2' 'not assigned.unknown' 'niben044scf00014193ctg001_1183-3968' ' no hits & (original description: Putative , Description = , PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00014264ctg007_2170-6089' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00014276ctg002_4716-10077' ' no hits & (original description: Putative PGSC0003DMG400010413, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00014317ctg000_4586-7173' ' no hits & (original description: Putative KGM_10865, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = PF03372)' T '35.2' 'not assigned.unknown' 'niben044scf00014320ctg003_6837-9743' ' (original description: Putative , Description = Reverse transcriptase, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00014324ctg006_947-2370' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00014389ctg001_32088-43865' '(at4g36630 : 1261.0) EMBRYO DEFECTIVE 2754 (EMB2754); FUNCTIONS IN: small GTPase regulator activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Citron-like (InterPro:IPR001180), Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1 (InterPro:IPR019452), Armadillo-type fold (InterPro:IPR016024), Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2 (InterPro:IPR019453); Has 871 Blast hits to 660 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 376; Fungi - 292; Plants - 87; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). & (gnl|cdd|37274 : 460.0) no description available & (reliability: 2522.0) & (original description: Putative EMB2754, Description = Putative uncharacterized protein At4g36630, PFAM = PF00637;PF10366;PF10367;PF00780)' T '35.2' 'not assigned.unknown' 'niben044scf00014392ctg000_7007-9664' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00014431ctg014_12747-15189' '(at5g20270 : 114.0) heptahelical transmembrane protein homologous to human adiponectin receptors and progestin receptors; heptahelical transmembrane protein1 (HHP1); FUNCTIONS IN: receptor activity; INVOLVED IN: response to salt stress, response to hormone stimulus, response to sucrose stimulus; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hly-III related (InterPro:IPR004254); BEST Arabidopsis thaliana protein match is: heptahelical transmembrane protein2 (TAIR:AT4G30850.2); Has 2727 Blast hits to 2656 proteins in 794 species: Archae - 0; Bacteria - 1143; Metazoa - 823; Fungi - 356; Plants - 236; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (gnl|cdd|35967 : 99.2) no description available & (reliability: 228.0) & (original description: Putative HHP1, Description = Hemolysin-III-like protein, PFAM = PF03006)' T '35.2' 'not assigned.unknown' 'niben044scf00014457ctg013_3128-11118' '(at1g36990 : 107.0) unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in 339 species: Archae - 2; Bacteria - 1372; Metazoa - 990; Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes - 1593 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00014474ctg001_21351-24430' '(at3g49290 : 122.0) One of four ABI-like proteins.; ABL interactor-like protein 2 (ABIL2); BEST Arabidopsis thaliana protein match is: ABL interactor-like protein 3 (TAIR:AT5G24310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative ABIL2, Description = ABIL1-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00014477ctg023_1-6770' '(at5g58250 : 211.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2488 (InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative CGL78, Description = BnaA03g09860D protein, PFAM = PF10674)' T '35.2' 'not assigned.unknown' 'niben044scf00014485ctg008_310-5479' '(at5g48830 : 137.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 274.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00014486ctg009_1-2434' ' no hits & (original description: Putative Sb08g020705, Description = OSJNBb0067G11.4 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00014488ctg002_7481-8878' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'niben044scf00014488ctg003_1-701' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00014522ctg005_5432-13133' ' (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00014531ctg005_543-3492' '(at5g53390 : 110.0) O-acyltransferase (WSD1-like) family protein; CONTAINS InterPro DOMAIN/s: O-acyltransferase, WSD1, C-terminal (InterPro:IPR009721), O-acyltransferase, WSD1, N-terminal (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT2G38995.2); Has 1220 Blast hits to 1207 proteins in 180 species: Archae - 4; Bacteria - 957; Metazoa - 16; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative BnaA03g12270D, Description = O-acyltransferase WSD1, PFAM = PF06974)' T '35.2' 'not assigned.unknown' 'niben044scf00014576ctg003_1305-3808' ' no hits & (original description: Putative PGSC0003DMG400041004, Description = Gag-pro-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00014585ctg003_1602-13495' ' no hits & (original description: Putative , Description = , PFAM = PF00255)' T '35.2' 'not assigned.unknown' 'niben044scf00014586ctg014_1-5608' '(gnl|cdd|29168 : 145.0) no description available & (at1g77710 : 144.0) CONTAINS InterPro DOMAIN/s: Ubiquitin-like, Ufm1 (InterPro:IPR005375); Has 244 Blast hits to 244 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 149; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|38693 : 143.0) no description available & (q94dm8|ufm1_orysa : 140.0) Probable ubiquitin-fold modifier 1 precursor - Oryza sativa (Rice) & (reliability: 288.0) & (original description: Putative pol, Description = Ubiquitin-fold modifier 1, PFAM = PF03671)' T '35.2' 'not assigned.unknown' 'niben044scf00014588ctg005_6743-10154' ' no hits & (original description: Putative SLL1, Description = SLL1 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00014646ctg000_1-6506' '(at2g25730 : 293.0) unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages. & (gnl|cdd|37022 : 239.0) no description available & (reliability: 586.0) & (original description: Putative , Description = Zinc finger FYVE domain-containing protein 26 isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00014651ctg010_1364-8242' '(at1g01730 : 90.5) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 1; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00014715ctg014_2765-5242' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00014722ctg004_9268-11822' ' no hits & (original description: Putative FGENESH1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00014725ctg008_129-6657' '(at5g40640 : 520.0) unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27390.1); Has 104 Blast hits to 102 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 1040.0) & (original description: Putative At3g27390, Description = Uncharacterized membrane protein At3g27390, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00014727ctg003_960-3786' '(at5g41980 : 134.0) CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative , Description = PIF-like transposase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00014732ctg015_7509-12314' ' no hits & (original description: Putative PGSC0003DMG402001493, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00014745ctg007_2668-5009' ' no hits & (original description: Putative sar, Description = Putative SAR8.2a-like protein, PFAM = PF03058)' T '35.2' 'not assigned.unknown' 'niben044scf00014769ctg001_14868-17330' ' no hits & (original description: Putative PGSC0003DMG400004656, Description = Ankyrin repeat protein, PFAM = PF12796)' T '35.2' 'not assigned.unknown' 'niben044scf00014776ctg011_23747-27232' ' no hits & (original description: Putative PGSC0003DMG400045123, Description = Zinc finger containing preotein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00014826ctg011_7670-9814' ' (original description: Putative pol, Description = Reverse transcriptase, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00014846ctg002_21250-28593' '(at4g30900 : 542.0) DNAse I-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1084.0) & (original description: Putative At4g30900, Description = Endonuclease/exonuclease/phosphatase domain-containing protein, PFAM = PF03372)' T '35.2' 'not assigned.unknown' 'niben044scf00014848ctg005_1-2819' '(at5g22820 : 167.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024). & (reliability: 334.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00014858ctg007_1-3049' '(at2g30700 : 319.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G61900.1); Has 68 Blast hits to 67 proteins in 13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 638.0) & (original description: Putative BnaA03g14090D, Description = BnaA03g14090D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00014862ctg002_311-3002' ' no hits & (original description: Putative RPL35, Description = 50S ribosomal protein L35, chloroplastic, PFAM = PF01632)' T '35.2' 'not assigned.unknown' 'niben044scf00014865ctg009_282-2779' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00014876ctg011_1-3183' '(at5g53160 : 251.0) Encodes RCAR3, a regulatory component of ABA receptor. Interacts with protein phosphatase 2Cs ABI1 and ABI2. Stimulates ABA signaling.; regulatory components of ABA receptor 3 (RCAR3); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: regulatory component of ABA receptor 1 (TAIR:AT1G01360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 502.0) & (original description: Putative PYL2, Description = ABA receptor, PFAM = PF10604)' T '35.2' 'not assigned.unknown' 'niben044scf00014883ctg002_2146-4664' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00014914ctg013_560-3642' '(at1g67660 : 342.0) Restriction endonuclease, type II-like superfamily protein; FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: YqaJ viral recombinase family (InterPro:IPR019080), Putative phage-type endonuclease (InterPro:IPR017482), Exonuclease, phage-type/RecB, C-terminal (InterPro:IPR011604), Restriction endonuclease, type II-like (InterPro:IPR011335); BEST Arabidopsis thaliana protein match is: Restriction endonuclease, type II-like superfamily protein (TAIR:AT1G13810.1). & (gnl|cdd|88132 : 118.0) no description available & (reliability: 684.0) & (original description: Putative At1g67660, Description = Restriction endonuclease, type II-like protein, PFAM = PF09588)' T '35.2' 'not assigned.unknown' 'niben044scf00014925ctg007_1-1636' ' no hits & (original description: Putative PGSC0003DMG400036344, Description = , PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'niben044scf00014958ctg009_251-4984' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00014966ctg001_1-2587' ' no hits & (original description: Putative PGSC0003DMG400013153, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00014991ctg004_1-2541' ' no hits & (original description: Putative PGSC0003DMG400023973, Description = L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00014997ctg006_2043-3795' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'niben044scf00015044ctg001_7804-17432' '(at5g22120 : 258.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 516.0) & (original description: Putative At5g22120, Description = At5g22100, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00015071ctg010_1-2912' ' (original description: Putative pbpA2, Description = Penicillin-binding protein, 1A family, PFAM = PF00912)' T '35.2' 'not assigned.unknown' 'niben044scf00015075ctg008_1-3143' ' no hits & (original description: Putative PGSC0003DMG400009538, Description = Putative ovule protein, PFAM = PF02362)' T '35.2' 'not assigned.unknown' 'niben044scf00015078ctg011_5821-11016' ' no hits & (original description: Putative PGSC0003DMG400020472, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00015145ctg021_29414-32387' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00015145ctg022_9442-10639' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Retrovirus-related Pol polyprotein LINE-1, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00015244ctg006_1-2915' '(at2g46000 : 106.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mesoderm development candidate 2 (InterPro:IPR019330); Has 31 Blast hits to 31 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative BnaA03g21220D, Description = BnaA03g21220D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00015253ctg016_15213-26330' '(at3g27325 : 800.0) hydrolases, acting on ester bonds; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: intracellular protein transport, GPI anchor metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PGAP1-like (InterPro:IPR012908). & (gnl|cdd|38928 : 392.0) no description available & (reliability: 1600.0) & (original description: Putative Sb02g015550, Description = Putative uncharacterized protein Sb02g015550, PFAM = PF07819)' T '35.2' 'not assigned.unknown' 'niben044scf00015289ctg002_1-6992' ' no hits & (original description: Putative BnaCnng47570D, Description = BnaCnng47570D protein, PFAM = PF02902)' T '35.2' 'not assigned.unknown' 'niben044scf00015294ctg003_9468-15291' '(at5g02520 : 95.1) CONTAINS InterPro DOMAIN/s: SANT associated (InterPro:IPR015216); BEST Arabidopsis thaliana protein match is: kinase interacting family protein (TAIR:AT1G58210.1); Has 842 Blast hits to 736 proteins in 154 species: Archae - 2; Bacteria - 99; Metazoa - 236; Fungi - 52; Plants - 90; Viruses - 0; Other Eukaryotes - 363 (source: NCBI BLink). & (gnl|cdd|72550 : 89.2) no description available & (reliability: 190.2) & (original description: Putative , Description = , PFAM = PF09133)' T '35.2' 'not assigned.unknown' 'niben044scf00015307ctg012_2827-5623' ' no hits & (original description: Putative , Description = , PFAM = PF03732)' T '35.2' 'not assigned.unknown' 'niben044scf00015347ctg005_14334-17105' '(at3g52060 : 354.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G22070.1); Has 568 Blast hits to 568 proteins in 19 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 545; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|86287 : 332.0) no description available & (reliability: 708.0) & (original description: Putative Os03g0648100, Description = Expressed protein, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben044scf00015379ctg004_1-1062' ' no hits & (original description: Putative orf2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00015395ctg006_2380-10890' '(at4g31530 : 375.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: 3-beta-hydroxy-delta5-steroid dehydrogenase activity, binding, catalytic activity; INVOLVED IN: steroid biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-beta hydroxysteroid dehydrogenase/isomerase (InterPro:IPR002225), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G37660.1). & (gnl|cdd|36417 : 181.0) no description available & (reliability: 750.0) & (original description: Putative Cyan7822_5694, Description = NmrA family protein, PFAM = PF13460)' T '35.2' 'not assigned.unknown' 'niben044scf00015409ctg014_7384-13384' '(at3g01015 : 285.0) TPX2 (targeting protein for Xklp2) protein family; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT5G15510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 570.0) & (original description: Putative BnaC02g06090D, Description = BnaC02g06090D protein, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'niben044scf00015409ctg015_23253-31825' '(at5g15510 : 276.0) TPX2 (targeting protein for Xklp2) protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT3G01015.1). & (reliability: 552.0) & (original description: Putative At5g15510, Description = TPX2 (Targeting protein for Xklp2) family protein, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'niben044scf00015425ctg023_673-4039' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00015429ctg006_5432-8571' '(at4g20190 : 140.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44660.1); Has 271 Blast hits to 209 proteins in 52 species: Archae - 0; Bacteria - 15; Metazoa - 63; Fungi - 14; Plants - 48; Viruses - 3; Other Eukaryotes - 128 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00015431ctg026_1638-5089' '(at3g19120 : 530.0) PIF / Ping-Pong family of plant transposases; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12010.1); Has 644 Blast hits to 642 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 379; Fungi - 49; Plants - 189; Viruses - 3; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|39785 : 191.0) no description available & (reliability: 1060.0) & (original description: Putative , Description = , PFAM = PF13359)' T '35.2' 'not assigned.unknown' 'niben044scf00015434ctg001_20845-24026' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00015458ctg004_16351-20884' '(at5g55860 : 318.0) Plant protein of unknown function (DUF827); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT1G12150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative At5g55860, Description = WEB family protein At5g55860, PFAM = PF05701)' T '35.2' 'not assigned.unknown' 'niben044scf00015472ctg005_299-2749' ' no hits & (original description: Putative , Description = , PFAM = PF00098)' T '35.2' 'not assigned.unknown' 'niben044scf00015501ctg011_9472-12047' ' no hits & (original description: Putative , Description = Protein bicaudal C isogeny 1, PFAM = PF07647)' T '35.2' 'not assigned.unknown' 'niben044scf00015528ctg015_2572-4880' ' no hits & (original description: Putative PGSC0003DMG400018772, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00015534ctg008_435-7989' ' no hits & (original description: Putative , Description = Uncharacterized protein isoform 1, PFAM = PF06454)' T '35.2' 'not assigned.unknown' 'niben044scf00015650ctg003_20209-23330' ' no hits & (original description: Putative h1, Description = Histone H1, PFAM = PF00538)' T '35.2' 'not assigned.unknown' 'niben044scf00015669ctg007_9035-11220' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00015686ctg006_7017-14115' '(at5g41270 : 94.4) CONTAINS InterPro DOMAIN/s: RNAse P, Rpr2/Rpp21 subunit (InterPro:IPR007175); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00015705ctg009_1060-3942' '(at5g25170 : 250.0) PPPDE putative thiol peptidase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT2G25190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35545 : 229.0) no description available & (gnl|cdd|69428 : 174.0) no description available & (reliability: 500.0) & (original description: Putative dl4780c, Description = At5g25170, PFAM = PF05903)' T '35.2' 'not assigned.unknown' 'niben044scf00015718ctg011_47-9502' '(at1g71240 : 620.0) Plant protein of unknown function (DUF639); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF639 (InterPro:IPR006927); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF639) (TAIR:AT1G48840.1); Has 140 Blast hits to 137 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 140; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68417 : 403.0) no description available & (reliability: 1240.0) & (original description: Putative At1g71240, Description = BnaC06g32380D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00015718ctg012_1-3440' '(at1g71240 : 81.6) Plant protein of unknown function (DUF639); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF639 (InterPro:IPR006927); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF639) (TAIR:AT1G48840.1); Has 140 Blast hits to 137 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 140; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative , Description = Uncharacterized protein isoform 3, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00015728ctg013_4166-6555' ' no hits & (original description: Putative C3H35, Description = Zinc finger CCCH domain-containing protein 32, PFAM = PF00642)' T '35.2' 'not assigned.unknown' 'niben044scf00015796ctg002_1-3490' '(at1g04530 : 134.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G17940.1); Has 713 Blast hits to 362 proteins in 65 species: Archae - 10; Bacteria - 98; Metazoa - 37; Fungi - 8; Plants - 512; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative PGSC0003DMG400001551, Description = Tetratricopeptide repeat-like superfamily protein, putative isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00015802ctg000_1-3002' ' no hits & (original description: Putative BNQ1, Description = Transcription factor style2.1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00015849ctg006_1-2111' ' no hits & (original description: Putative gfh2, Description = Cytochrome P450 family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00015878ctg022_1-7251' ' no hits & (original description: Putative , Description = Putative helicase protein MOM1-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00015896ctg000_1820-6147' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00015915ctg003_3082-6988' '(at2g44850 : 360.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0565 (InterPro:IPR018881); Has 106 Blast hits to 106 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|38011 : 220.0) no description available & (reliability: 720.0) & (original description: Putative C650ERIPDK, Description = Putative AC9 transposase, PFAM = PF10561)' T '35.2' 'not assigned.unknown' 'niben044scf00015937ctg004_4995-7297' ' (original description: Putative orf135, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00015938ctg004_438-7756' '(at3g06080 : 511.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 11 (TAIR:AT5G19160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72785 : 120.0) no description available & (reliability: 1022.0) & (original description: Putative TBL10, Description = Protein trichome birefringence-like 10, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben044scf00015981ctg008_830-5977' '(at1g72270 : 241.0) LOCATED IN: mitochondrion; EXPRESSED IN: shoot apex, embryo, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: PIF / Ping-Pong family of plant transposases (TAIR:AT3G55350.1). & (gnl|cdd|39785 : 104.0) no description available & (reliability: 482.0) & (original description: Putative , Description = , PFAM = PF13359)' T '35.2' 'not assigned.unknown' 'niben044scf00016014ctg003_146-4994' ' no hits & (original description: Putative TCM_008314, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00016044ctg001_1219-4954' '(at1g69070 : 120.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nop14-like protein (InterPro:IPR007276); Has 69842 Blast hits to 35213 proteins in 1572 species: Archae - 363; Bacteria - 20593; Metazoa - 20851; Fungi - 8010; Plants - 2912; Viruses - 517; Other Eukaryotes - 16596 (source: NCBI BLink). & (gnl|cdd|37358 : 103.0) no description available & (gnl|cdd|67750 : 94.4) no description available & (reliability: 240.0) & (original description: Putative NOP14, Description = Nucleolar protein 14, PFAM = PF04147)' T '35.2' 'not assigned.unknown' 'niben044scf00016044ctg004_3821-6776' '(gnl|cdd|67750 : 110.0) no description available & (at1g69070 : 108.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nop14-like protein (InterPro:IPR007276); Has 69842 Blast hits to 35213 proteins in 1572 species: Archae - 363; Bacteria - 20593; Metazoa - 20851; Fungi - 8010; Plants - 2912; Viruses - 517; Other Eukaryotes - 16596 (source: NCBI BLink). & (gnl|cdd|37358 : 104.0) no description available & (reliability: 216.0) & (original description: Putative AT1G69070, Description = Nucleolar protein 14, PFAM = PF04147)' T '35.2' 'not assigned.unknown' 'niben044scf00016051ctg009_2873-6492' ' no hits & (original description: Putative PGSC0003DMG400028120, Description = Phytochrome kinase substrate-related family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00016115ctg008_1-1817' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00016121ctg026_1-4589' '(at4g27500 : 226.0) interacts with H+-ATPase, and regulates its activity; proton pump interactor 1 (PPI1); FUNCTIONS IN: protein binding; INVOLVED IN: regulation of proton transport; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36690.1); Has 56187 Blast hits to 35171 proteins in 2461 species: Archae - 533; Bacteria - 11472; Metazoa - 20772; Fungi - 6196; Plants - 2564; Viruses - 257; Other Eukaryotes - 14393 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative PPI1, Description = Proton pump interactor, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00016171ctg000_2901-8205' '(at5g25270 : 87.8) Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT5G42220.1); Has 11489 Blast hits to 5746 proteins in 742 species: Archae - 0; Bacteria - 401; Metazoa - 4954; Fungi - 1390; Plants - 2430; Viruses - 186; Other Eukaryotes - 2128 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative , Description = , PFAM = PF00240)' T '35.2' 'not assigned.unknown' 'niben044scf00016192ctg005_21043-23441' ' no hits & (original description: Putative pol, Description = Retrotransposon protein, putative, unclassified, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00016215ctg002_285-4693' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00016223ctg011_2771-9234' '(at4g38760 : 665.0) Protein of unknown function (DUF3414); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3414 (InterPro:IPR021827); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10845.1); Has 113 Blast hits to 108 proteins in 52 species: Archae - 0; Bacteria - 2; Metazoa - 61; Fungi - 10; Plants - 37; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 1330.0) & (original description: Putative At4g38760, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00016226ctg001_7924-13572' '(at3g30380 : 358.0) alpha/beta-Hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G01690.1); Has 4039 Blast hits to 4030 proteins in 818 species: Archae - 8; Bacteria - 1345; Metazoa - 714; Fungi - 203; Plants - 307; Viruses - 6; Other Eukaryotes - 1456 (source: NCBI BLink). & (gnl|cdd|36765 : 303.0) no description available & (reliability: 716.0) & (original description: Putative abhd17c, Description = Protein ABHD17C, PFAM = PF12146)' T '35.2' 'not assigned.unknown' 'niben044scf00016292ctg011_9585-17230' '(at2g40430 : 183.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tumour suppressor protein Gltscr2 (InterPro:IPR011211), P60-like (InterPro:IPR011687). & (gnl|cdd|38034 : 141.0) no description available & (gnl|cdd|71208 : 95.1) no description available & (reliability: 366.0) & (original description: Putative pco134590, Description = Putative gltscr2-domain family protein isoform 1, PFAM = PF07767)' T '35.2' 'not assigned.unknown' 'niben044scf00016325ctg004_1-4286' '(at5g45410 : 324.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25030.2); Has 124 Blast hits to 124 proteins in 34 species: Archae - 2; Bacteria - 31; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 648.0) & (original description: Putative At5g45410, Description = AT5G45410 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00016332ctg011_1-961' ' no hits & (original description: Putative At4g03810, Description = Retrotransposon protein, putative, Ty1-copia subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00016372ctg005_109-2479' ' no hits & (original description: Putative , Description = Zinc finger containing preotein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00016387ctg001_2945-7537' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00016427ctg013_1-14479' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00016437ctg012_413-4847' ' (original description: Putative Os11g0136800, Description = Os11g0136800 protein, PFAM = PF00782)' T '35.2' 'not assigned.unknown' 'niben044scf00016475ctg007_1-5364' '(at1g51560 : 516.0) Pyridoxamine 5'-phosphate oxidase family protein; FUNCTIONS IN: FMN binding; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: FMN-binding split barrel (InterPro:IPR012349), Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain (InterPro:IPR011576), FMN-binding split barrel, related (InterPro:IPR009002); BEST Arabidopsis thaliana protein match is: Pyridoxamine 5'-phosphate oxidase family protein (TAIR:AT3G21140.1); Has 633 Blast hits to 633 proteins in 219 species: Archae - 0; Bacteria - 353; Metazoa - 24; Fungi - 0; Plants - 140; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). & (reliability: 1032.0) & (original description: Putative BnaC06g13340D, Description = BnaC06g13340D protein, PFAM = PF13883)' T '35.2' 'not assigned.unknown' 'niben044scf00016479ctg002_1-2876' '(at2g24100 : 171.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30780.1); Has 101 Blast hits to 101 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative At3g05770, Description = F10A16.6 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00016486ctg001_1-2805' ' (original description: Putative KK1_027705, Description = LINE-1 reverse transcriptase isogeny, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00016487ctg011_11803-17234' ' no hits & (original description: Putative TCM_002874, Description = RPM1 interacting protein 4, putative, PFAM = PF05627)' T '35.2' 'not assigned.unknown' 'niben044scf00016606ctg010_3833-8812' ' no hits & (original description: Putative MADSC4, Description = Putative agamous-like MADS-box protein AGL27-like, PFAM = PF01486)' T '35.2' 'not assigned.unknown' 'niben044scf00016685ctg002_1-2292' '(at1g27385 : 149.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454); Has 79 Blast hits to 79 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative Os02g0507400, Description = Os02g0507400 protein, PFAM = PF04359)' T '35.2' 'not assigned.unknown' 'niben044scf00016693ctg000_2281-6374' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00016711ctg002_870-4384' '(at3g49210 : 214.0) O-acyltransferase (WSD1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: O-acyltransferase, WSD1, C-terminal (InterPro:IPR009721), O-acyltransferase, WSD1, N-terminal (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT3G49200.1); Has 1044 Blast hits to 1032 proteins in 166 species: Archae - 2; Bacteria - 797; Metazoa - 8; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|70441 : 202.0) no description available & (reliability: 428.0) & (original description: Putative FOP, Description = O-acyltransferase (WSD1-like) family protein, PFAM = PF06974)' T '35.2' 'not assigned.unknown' 'niben044scf00016716ctg003_1-4051' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00016720ctg001_852-2841' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben044scf00016749ctg011_1278-5938' '(at1g59520 : 189.0) Encodes CW7.; CW7; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2045 (InterPro:IPR019141); Has 145 Blast hits to 144 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 91; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|37676 : 149.0) no description available & (reliability: 378.0) & (original description: Putative T4M14.9, Description = Putative uncharacterized protein T4M14.9, PFAM = PF09741)' T '35.2' 'not assigned.unknown' 'niben044scf00016780ctg002_3697-5996' '(atmg00520 : 177.0) hypothetical protein; MATR; FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity; INVOLVED IN: RNA-dependent DNA replication, RNA splicing; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Intron maturase, type II (InterPro:IPR000442), RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477); BEST Arabidopsis thaliana protein match is: Intron maturase, type II family protein (TAIR:AT1G74350.1). & (gnl|cdd|39965 : 109.0) no description available & (gnl|cdd|85399 : 81.4) no description available & (reliability: 354.0) & (original description: Putative matR, Description = Maturase, PFAM = PF01348)' T '35.2' 'not assigned.unknown' 'niben044scf00016786ctg002_6451-12157' '(at1g20770 : 99.4) unknown protein; Has 59 Blast hits to 59 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 198.8) & (original description: Putative PGSC0003DMG400001324, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00016791ctg003_4840-9671' '(at1g71310 : 118.0) cobalt ion binding; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative At1g71310, Description = Organellar dna-binding protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00016832ctg004_5742-8860' ' no hits & (original description: Putative PGSC0003DMG400003483, Description = B3 DNA binding domain-containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00016938ctg013_7951-9665' ' no hits & (original description: Putative PGSC0003DMG400010963, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00016946ctg004_831-9751' '(at3g62900 : 259.0) CW-type Zinc Finger; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: trichome; CONTAINS InterPro DOMAIN/s: Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02990.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 518.0) & (original description: Putative At3g62900, Description = MORC family CW-type zinc finger protein 4, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00016948ctg002_1-4872' '(at5g49210 : 94.7) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative At5g49210, Description = AT5g49210/K21P3_8, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00017060ctg004_47655-50888' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00017064ctg016_4093-8568' '(at5g23395 : 132.0) Cox19-like CHCH family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative CHP, Description = Coiled-coil-helix-coiled-coil-helix domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00017094ctg005_1-2493' '(at3g10120 : 81.6) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03890.1); Has 57 Blast hits to 57 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative , Description = , PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben044scf00017107ctg002_1-10083' '(at1g73650 : 342.0) FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors; INVOLVED IN: lipid metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104), Protein of unknown function DUF1295 (InterPro:IPR010721); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1295) (TAIR:AT1G18180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|70433 : 228.0) no description available & (gnl|cdd|39849 : 185.0) no description available & (reliability: 684.0) & (original description: Putative v1g182482, Description = Predicted protein, PFAM = PF06966)' T '35.2' 'not assigned.unknown' 'niben044scf00017115ctg008_1-6187' '(at4g24680 : 115.0) Encodes MOS1 (MODIFIER OF snc1). MOS1 contains a BAT2 domain that is conserved in plants and animals. MOS1 regulates the expression of SNC1, a TIR-NB-LRR-type of R protein.; MODIFIER OF snc1 (MOS1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of gene expression, epigenetic; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; Has 5806 Blast hits to 4291 proteins in 546 species: Archae - 8; Bacteria - 946; Metazoa - 2312; Fungi - 705; Plants - 202; Viruses - 15; Other Eukaryotes - 1618 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative PGSC0003DMG402018164, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00017126ctg006_1-2860' '(at4g01037 : 520.0) what's this factor? (WTF1); CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant (InterPro:IPR021099); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein (TAIR:AT5G62990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1040.0) & (original description: Putative Os05g0571100, Description = Os05g0571100 protein, PFAM = PF11955)' T '35.2' 'not assigned.unknown' 'niben044scf00017224ctg019_697-4144' ' (original description: Putative CRF1, Description = Ethylene-responsive transcription factor RAP2-11, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'niben044scf00017227ctg005_18268-20408' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00017296ctg018_6368-9444' '(at3g25910 : 217.0) FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1644) (TAIR:AT3G24740.2); Has 1139 Blast hits to 687 proteins in 95 species: Archae - 0; Bacteria - 20; Metazoa - 459; Fungi - 70; Plants - 423; Viruses - 6; Other Eukaryotes - 161 (source: NCBI BLink). & (gnl|cdd|71240 : 182.0) no description available & (reliability: 434.0) & (original description: Putative TCM_038015, Description = Mitogen-activated protein kinase kinase kinase 1 isoform 1, PFAM = PF07800)' T '35.2' 'not assigned.unknown' 'niben044scf00017308ctg017_1-4447' '(at1g54460 : 115.0) TPX2 (targeting protein for Xklp2) protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: WVD2-like 1 (TAIR:AT3G04630.3); Has 583 Blast hits to 565 proteins in 94 species: Archae - 0; Bacteria - 3; Metazoa - 163; Fungi - 46; Plants - 315; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative F4I4, Description = TPX2, C-terminal domain-containing protein, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'niben044scf00017358ctg007_1462-6762' '(at3g25400 : 129.0) CONTAINS InterPro DOMAIN/s: NTP Pyrophosphohydrolase MazG-related, RS21-C6 (InterPro:IPR011394), EAR (InterPro:IPR009039), NTP pyrophosphohydrolase MazG, putative catalytic core (InterPro:IPR004518); Has 1123 Blast hits to 1121 proteins in 452 species: Archae - 22; Bacteria - 753; Metazoa - 81; Fungi - 3; Plants - 83; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative ZOSMA_58G00810, Description = MazG nucleotide pyrophosphohydrolase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00017360ctg021_3162-5699' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00017388ctg003_1-6921' '(at1g15060 : 550.0) Uncharacterised conserved protein UCP031088, alpha/beta hydrolase; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase, At1g15070 (InterPro:IPR016969), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase (TAIR:AT1G73750.1); Has 177 Blast hits to 156 proteins in 44 species: Archae - 2; Bacteria - 72; Metazoa - 2; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 1100.0) & (original description: Putative At1g15060, Description = At1g15070/F9L1_1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00017395ctg014_5786-8140' ' no hits & (original description: Putative LOC100167652, Description = Helitron helicase-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00017431ctg006_6908-9366' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00017466ctg004_1351-4194' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00017468ctg011_1-2562' '(gnl|cdd|69161 : 109.0) no description available & (at4g16100 : 108.0) Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT5G49220.1); Has 347 Blast hits to 341 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2; Plants - 319; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative , Description = DUF789 family protein, PFAM = PF05623)' T '35.2' 'not assigned.unknown' 'niben044scf00017480ctg003_7160-9427' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00017490ctg013_3016-6413' '(at5g27330 : 173.0) Prefoldin chaperone subunit family protein; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35383 : 93.0) no description available & (reliability: 346.0) & (original description: Putative PGSC0003DMG400001646, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00017492ctg003_14673-17414' ' no hits & (original description: Putative str246N, Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00017612ctg001_194-10229' '(at5g47490 : 872.0) RGPR-related; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: RGPR-related (TAIR:AT5G47480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37124 : 356.0) no description available & (reliability: 1744.0) & (original description: Putative BnaA09g18310D, Description = BnaA09g18310D protein, PFAM = PF12932;PF12931)' T '35.2' 'not assigned.unknown' 'niben044scf00017617ctg006_1181-6159' '(q8s1z1|utp11_orysa : 194.0) Probable U3 small nucleolar RNA-associated protein 11 (U3 snoRNA-associated protein 11) - Oryza sativa (Rice) & (at3g60360 : 183.0) EMBRYO SAC DEVELOPMENT ARREST 14 (EDA14); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: megagametogenesis; LOCATED IN: small-subunit processome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp11 (InterPro:IPR007144); Has 434 Blast hits to 428 proteins in 209 species: Archae - 4; Bacteria - 1; Metazoa - 127; Fungi - 141; Plants - 59; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|67607 : 122.0) no description available & (gnl|cdd|38447 : 115.0) no description available & (reliability: 366.0) & (original description: Putative Os01g0810000, Description = Probable U3 small nucleolar RNA-associated protein 11, PFAM = PF03998)' T '35.2' 'not assigned.unknown' 'niben044scf00017707ctg013_1-612' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Putative reverse transcriptase family member, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00017728ctg000_1028-5903' '(at1g23790 : 471.0) Plant protein of unknown function (DUF936); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF936, plant (InterPro:IPR010341); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF936) (TAIR:AT1G70340.1); Has 265 Blast hits to 216 proteins in 30 species: Archae - 0; Bacteria - 7; Metazoa - 9; Fungi - 7; Plants - 237; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|69589 : 241.0) no description available & (reliability: 942.0) & (original description: Putative ARALYDRAFT_676550, Description = Predicted protein, PFAM = PF06075;PF06075)' T '35.2' 'not assigned.unknown' 'niben044scf00017773ctg007_2469-7194' ' no hits & (original description: Putative MADSC4, Description = Putative agamous-like MADS-box protein AGL27-like, PFAM = PF01486)' T '35.2' 'not assigned.unknown' 'niben044scf00017785ctg000_1037-6148' '(at4g17540 : 120.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative Sb01g028860, Description = Putative uncharacterized protein Sb01g028860, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00017801ctg006_1-2426' '(at5g10750 : 375.0) Protein of unknown function (DUF1336); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT5G24990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70520 : 220.0) no description available & (reliability: 750.0) & (original description: Putative EDR2, Description = Pleckstrin homology domain-containing family protein, PFAM = PF07059)' T '35.2' 'not assigned.unknown' 'niben044scf00017813ctg007_3200-8625' '(gnl|cdd|71337 : 255.0) no description available & (at5g48385 : 239.0) FRIGIDA-like protein; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT4G14900.1); Has 1269 Blast hits to 1187 proteins in 101 species: Archae - 0; Bacteria - 22; Metazoa - 72; Fungi - 9; Plants - 1133; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 478.0) & (original description: Putative RCOM_1154790, Description = Protein FRIGIDA, putative, PFAM = PF07899)' T '35.2' 'not assigned.unknown' 'niben044scf00017838ctg000_328-2744' ' no hits & (original description: Putative WRKY3, Description = DNA-binding protein 3, PFAM = PF03106)' T '35.2' 'not assigned.unknown' 'niben044scf00017871ctg003_1-2873' '(at3g10250 : 218.0) Plant protein 1589 of unknown function; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476); BEST Arabidopsis thaliana protein match is: Plant protein 1589 of unknown function (TAIR:AT5G04090.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative F383_00486, Description = Histidine--tRNA ligase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00017872ctg015_1-2606' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00017874ctg006_8746-14583' ' no hits & (original description: Putative , Description = , PFAM = PF05904;PF05904)' T '35.2' 'not assigned.unknown' 'niben044scf00017874ctg006_9832-14438' ' no hits & (original description: Putative , Description = , PFAM = PF05904;PF05904)' T '35.2' 'not assigned.unknown' 'niben044scf00017899ctg010_272-2217' ' no hits & (original description: Putative FGENESH1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben044scf00017899ctg012_1-984' ' no hits & (original description: Putative , Description = Retrotransposon protein, putative, Ty1-copia subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00017906ctg011_1-2354' ' no hits & (original description: Putative NAC1, Description = NAC transcription factor, PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'niben044scf00017912ctg023_1-1762' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00017937ctg001_36-4019' ' no hits & (original description: Putative WRKY4, Description = WRKY family transcription factor, PFAM = PF03106)' T '35.2' 'not assigned.unknown' 'niben044scf00017947ctg011_1748-4199' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00017951ctg000_235-7424' '(at4g16580 : 520.0) Protein phosphatase 2C family protein; FUNCTIONS IN: phosphoprotein phosphatase activity, catalytic activity; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Sporulation stage II, protein E C-terminal (InterPro:IPR010822); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66720.1); Has 838 Blast hits to 828 proteins in 210 species: Archae - 0; Bacteria - 2; Metazoa - 184; Fungi - 235; Plants - 232; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (gnl|cdd|36593 : 318.0) no description available & (reliability: 1040.0) & (original description: Putative At4g16580, Description = Probable protein phosphatase 2C 55, PFAM = PF07228)' T '35.2' 'not assigned.unknown' 'niben044scf00017965ctg004_1-1873' ' no hits & (original description: Putative , Description = , PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'niben044scf00017975ctg006_787-4690' '(at3g06868 : 135.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00017990ctg012_839-3487' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00017992ctg002_1-1402' ' no hits & (original description: Putative HM01045, Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00018043ctg005_19864-23129' '(at2g39370 : 85.5) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37380.1); Has 184 Blast hits to 178 proteins in 53 species: Archae - 0; Bacteria - 58; Metazoa - 9; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative BnaA10g12350D, Description = BnaA10g12350D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00018054ctg003_1-3178' '(at1g55230 : 336.0) Family of unknown function (DUF716) ; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF716) (TAIR:AT1G55240.1); Has 423 Blast hits to 422 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 178; Fungi - 0; Plants - 243; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68394 : 131.0) no description available & (reliability: 672.0) & (original description: Putative T1.1, Description = T1.1 protein, PFAM = PF04819)' T '35.2' 'not assigned.unknown' 'niben044scf00018084ctg006_616-3212' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00018089ctg005_26392-32798' '(at3g57570 : 322.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024). & (reliability: 644.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00018089ctg006_1-1578' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00018131ctg007_3727-8165' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00018132ctg001_948-3520' ' no hits & (original description: Putative , Description = , PFAM = PF00319)' T '35.2' 'not assigned.unknown' 'niben044scf00018169ctg006_2325-6562' '(at2g28105 : 138.0) CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Replication factor A, C-terminal (InterPro:IPR013955); Has 20 Blast hits to 20 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative , Description = Alpha-L-fucosidase 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00018174ctg005_1377-3786' ' no hits & (original description: Putative PGSC0003DMG400022131, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00018197ctg002_7718-12039' ' no hits & (original description: Putative At5g17930, Description = BnaA02g03780D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00018217ctg002_1141-3593' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Putative reverse transcriptase family member, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00018220ctg002_1-1585' ' no hits & (original description: Putative TPS25, Description = Terpene synthase, PFAM = PF01397)' T '35.2' 'not assigned.unknown' 'niben044scf00018258ctg004_8936-11408' ' (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00018276ctg004_1658-4082' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00018314ctg005_1-6011' '(at5g27390 : 246.0) Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124); Has 23 Blast hits to 23 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative PPD8, Description = Photosystem II reaction center PsbP family protein, PFAM = PF01789)' T '35.2' 'not assigned.unknown' 'niben044scf00018343ctg013_1-2595' '(at2g27090 : 297.0) Protein of unknown function (DUF630 and DUF632); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT4G39790.1); Has 977 Blast hits to 876 proteins in 150 species: Archae - 2; Bacteria - 21; Metazoa - 160; Fungi - 127; Plants - 553; Viruses - 15; Other Eukaryotes - 99 (source: NCBI BLink). & (gnl|cdd|68358 : 80.3) no description available & (reliability: 594.0) & (original description: Putative At2g27090, Description = At2g27090, PFAM = PF04782;PF04783)' T '35.2' 'not assigned.unknown' 'niben044scf00018381ctg011_710-3984' '(at1g54200 : 97.8) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13980.1); Has 1084 Blast hits to 581 proteins in 136 species: Archae - 0; Bacteria - 72; Metazoa - 212; Fungi - 78; Plants - 102; Viruses - 0; Other Eukaryotes - 620 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative At1g54200, Description = BnaA06g00600D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00018395ctg015_51573-54727' ' no hits & (original description: Putative PGSC0003DMG400019084, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00018431ctg000_408-3589' ' no hits & (original description: Putative RCOM_0898450, Description = Ubiquitin-protein ligase, putative, PFAM = PF12937)' T '35.2' 'not assigned.unknown' 'niben044scf00018450ctg002_1-6597' '(at2g03800 : 265.0) encodes a D-aminoacyl-tRNA deacylase. Involved in detoxification of D-aminoacyl-tRNA. Mutants also show ethanol-hypersensitive phenotype.; GEKO1 (GEK1); CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP016210 (InterPro:IPR018033), D-aminoacyl-tRNA deacylase (InterPro:IPR007508); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86658 : 148.0) no description available & (reliability: 530.0) & (original description: Putative Os09g0248000, Description = Os09g0248000 protein, PFAM = PF04414)' T '35.2' 'not assigned.unknown' 'niben044scf00018507ctg005_2009-6015' ' no hits & (original description: Putative MADSC4, Description = Putative agamous-like MADS-box protein AGL27-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00018553ctg016_7180-10241' '(at3g22520 : 168.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14840.1); Has 717 Blast hits to 703 proteins in 179 species: Archae - 14; Bacteria - 134; Metazoa - 141; Fungi - 74; Plants - 209; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative BnaA01g24650D, Description = BnaA01g24650D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00018561ctg001_866-5060' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00018563ctg027_52937-57817' '(gnl|cdd|69161 : 318.0) no description available & (at4g03420 : 316.0) Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G03610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 632.0) & (original description: Putative At4g03420, Description = At4g16100, PFAM = PF05623)' T '35.2' 'not assigned.unknown' 'niben044scf00018571ctg005_5109-7258' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00018596ctg013_1-2177' '(at3g15351 : 98.6) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 43 Blast hits to 43 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 197.2) & (original description: Putative At3g15351, Description = AT3G15351 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00018603ctg009_1-3038' ' no hits & (original description: Putative , Description = , PFAM = PF07734;PF00646)' T '35.2' 'not assigned.unknown' 'niben044scf00018621ctg004_4715-12317' '(at2g28230 : 331.0) TATA-binding related factor (TRF) of subunit 20 of Mediator complex; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med20 (InterPro:IPR013921); BEST Arabidopsis thaliana protein match is: TATA-binding related factor (TRF) of subunit 20 of Mediator complex (TAIR:AT4G09070.1); Has 80 Blast hits to 80 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|87577 : 171.0) no description available & (gnl|cdd|36597 : 162.0) no description available & (reliability: 662.0) & (original description: Putative MED20A, Description = Mediator of RNA polymerase II transcription subunit 20a, PFAM = PF08612)' T '35.2' 'not assigned.unknown' 'niben044scf00018660ctg005_5465-8567' '(gnl|cdd|71235 : 172.0) no description available & (at5g22930 : 138.0) Protein of unknown function (DUF1635); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1635 (InterPro:IPR012862); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1635) (TAIR:AT3G44940.1); Has 97 Blast hits to 97 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative At5g22930, Description = Emb}, PFAM = PF07795)' T '35.2' 'not assigned.unknown' 'niben044scf00018703ctg005_7247-9882' ' no hits & (original description: Putative MTR_5g061150, Description = Copia-like polyprotein/retrotransposon, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben044scf00018722ctg000_18391-21853' '(at3g25130 : 127.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; Has 3885 Blast hits to 2658 proteins in 280 species: Archae - 12; Bacteria - 208; Metazoa - 970; Fungi - 222; Plants - 148; Viruses - 11; Other Eukaryotes - 2314 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative PGSC0003DMG400017495, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00018799ctg000_1-9023' '(gnl|cdd|37246 : 179.0) no description available & (at5g27740 : 172.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 2775 (EMB2775); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp-loader complex, subunit E, C-terminal (InterPro:IPR019483), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921); BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA) (TAIR:AT1G21690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80670 : 84.9) no description available & (reliability: 344.0) & (original description: Putative TCM_016678, Description = ATPase family associated with various cellular activities, putative isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00018818ctg001_5402-8496' ' (original description: Putative TCM_029943, Description = Galactose oxidase/kelch repeat superfamily protein, putative, PFAM = PF13964)' T '35.2' 'not assigned.unknown' 'niben044scf00018824ctg002_15435-19103' '(at5g11480 : 243.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: barrier septum formation; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein, HSR1-related (InterPro:IPR002917), GTP-binding protein, ribosome biogenesis, YsxC (InterPro:IPR019987); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G22870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37697 : 199.0) no description available & (gnl|cdd|57961 : 154.0) no description available & (reliability: 486.0) & (original description: Putative engB, Description = Probable GTP-binding protein EngB, PFAM = PF01926)' T '35.2' 'not assigned.unknown' 'niben044scf00018865ctg003_3419-6912' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00018875ctg004_1-1886' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00018885ctg012_9429-11815' ' no hits & (original description: Putative PGSC0003DMG402016214, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00018934ctg010_11132-13840' '(at4g33985 : 115.0) Protein of unknown function (DUF1685); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1685) (TAIR:AT2G15590.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71376 : 86.1) no description available & (reliability: 230.0) & (original description: Putative , Description = , PFAM = PF07939)' T '35.2' 'not assigned.unknown' 'niben044scf00018976ctg005_3300-6727' ' (original description: Putative PGSC0003DMG400036651, Description = , PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'niben044scf00018988ctg012_1-3766' ' no hits & (original description: Putative glysoja_039142, Description = Putative P-loop containing nucleoside triphosphate hydrolases superfamily protein-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00018995ctg013_1-5437' '(at5g14310 : 659.0) carboxyesterase 16 (CXE16); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36728 : 252.0) no description available & (gnl|cdd|87389 : 180.0) no description available & (q6l545|gid1_orysa : 128.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 1318.0) & (original description: Putative CXE16, Description = Probable carboxylesterase 16, PFAM = PF07859)' T '35.2' 'not assigned.unknown' 'niben044scf00018995ctg014_48-4833' '(at3g27325 : 415.0) hydrolases, acting on ester bonds; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: intracellular protein transport, GPI anchor metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PGAP1-like (InterPro:IPR012908). & (gnl|cdd|38928 : 287.0) no description available & (gnl|cdd|87379 : 183.0) no description available & (reliability: 830.0) & (original description: Putative At3g27325, Description = GPI inositol-deacylase, PFAM = PF07819)' T '35.2' 'not assigned.unknown' 'niben044scf00018996ctg001_162-9490' '(at5g16520 : 545.0) unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1090.0) & (original description: Putative PGSC0003DMG402016935, Description = At5g16520, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00019031ctg005_1-1565' ' no hits & (original description: Putative dl4380w, Description = UDP-N-acetylglucosamine transferase subunit alg13, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00019044ctg003_1271-4119' ' no hits & (original description: Putative , Description = , PFAM = PF10536)' T '35.2' 'not assigned.unknown' 'niben044scf00019049ctg014_1-1436' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00019049ctg015_1-1450' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Retrovirus-related Pol polyprotein LINE-1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00019085ctg000_4839-10429' '(at4g28740 : 331.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3493 (InterPro:IPR021883); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT1G02910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 662.0) & (original description: Putative PGSC0003DMG400022024, Description = OSJNBa0043L24.5 protein, PFAM = PF11998)' T '35.2' 'not assigned.unknown' 'niben044scf00019106ctg007_24378-29933' '(at1g71190 : 422.0) Senescence associated gene (SAG). Expression induced by ozone. Encodes a plant-specific protein of unknown function. Based on a personal communication from David Meinke (08/21/2007), this gene is not allelic to TTN4, even though this has been stated previously in a publication.; senescence associated gene 18 (SAG18); LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Alkaline phytoceramidase (aPHC) (TAIR:AT5G11870.2). & (reliability: 844.0) & (original description: Putative SAG18, Description = SAG18, PFAM = PF05875)' T '35.2' 'not assigned.unknown' 'niben044scf00019139ctg000_196-2676' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00019183ctg002_19184-22953' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00019183ctg002_22110-25702' ' no hits & (original description: Putative PGSC0003DMG400028220, Description = CYP82M1v1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00019185ctg017_1243-3224' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00019199ctg007_7379-8562' ' no hits & (original description: Putative psbN, Description = Protein PsbN, PFAM = PF02468)' T '35.2' 'not assigned.unknown' 'niben044scf00019211ctg000_1518-7164' '(at2g22720 : 80.1) SPT2 chromatin protein; CONTAINS InterPro DOMAIN/s: Chromatin SPT2 (InterPro:IPR013256); BEST Arabidopsis thaliana protein match is: SPT2 chromatin protein (TAIR:AT4G37860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative glysoja_040091, Description = 60S ribosomal protein L24, PFAM = PF08243)' T '35.2' 'not assigned.unknown' 'niben044scf00019220ctg000_7857-12744' '(at2g30695 : 86.3) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative pco148714(246), Description = Trigger factor, PFAM = PF05697)' T '35.2' 'not assigned.unknown' 'niben044scf00019287ctg019_7363-10259' ' no hits & (original description: Putative PGSC0003DMG402013972, Description = , PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben044scf00019297ctg005_677-9535' '(at3g62900 : 257.0) CW-type Zinc Finger; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: trichome; CONTAINS InterPro DOMAIN/s: Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02990.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 514.0) & (original description: Putative At3g62900, Description = Zinc finger, CW-type, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00019300ctg012_537-3039' ' no hits & (original description: Putative orf58, Description = Orf146 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00019324ctg010_1-2890' '(at5g03110 : 81.6) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: protamine P1 family protein (TAIR:AT2G37100.1); Has 81 Blast hits to 73 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00019366ctg002_1-9372' ' no hits & (original description: Putative PGSC0003DMG400022853, Description = Putative E3 ubiquitin-protein ligase IE1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00019367ctg002_1-6227' '(at1g15780 : 380.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). & (reliability: 760.0) & (original description: Putative MED15A, Description = Transcription cofactor, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00019367ctg005_1-2764' '(at1g15780 : 119.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative Sb07g023600, Description = Putative uncharacterized protein Sb07g023600, PFAM = PF16987)' T '35.2' 'not assigned.unknown' 'niben044scf00019376ctg000_5342-7100' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00019403ctg003_15740-18922' '(at5g15802 : 86.7) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35 Blast hits to 35 proteins in 15 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative MTR_6g015965, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00019413ctg006_18087-38632' '(at5g63100 : 329.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G44600.1); Has 163 Blast hits to 163 proteins in 58 species: Archae - 2; Bacteria - 69; Metazoa - 2; Fungi - 2; Plants - 84; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 658.0) & (original description: Putative Sb04g002920, Description = Putative uncharacterized protein Sb04g002920, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00019428ctg004_80-2614' ' no hits & (original description: Putative BnaC09g03390D, Description = BnaC09g03390D protein, PFAM = PF00320)' T '35.2' 'not assigned.unknown' 'niben044scf00019466ctg006_2560-9216' ' no hits & (original description: Putative PGSC0003DMG400017488, Description = GPI-GlcNAc transferase complex, PIG-H component, conserved domain-containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00019490ctg000_109-3839' ' no hits & (original description: Putative GCL1, Description = Polyadenylate-binding protein 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00019563ctg002_12698-14179' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Retrovirus-related Pol polyprotein LINE-1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00019577ctg006_2000-9332' '(at4g35240 : 528.0) Protein of unknown function (DUF630 and DUF632); EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT2G17110.1). & (gnl|cdd|68357 : 330.0) no description available & (reliability: 1056.0) & (original description: Putative PGSC0003DMG400018656, Description = Putative uncharacterized protein At1g77500, PFAM = PF04783;PF04782)' T '35.2' 'not assigned.unknown' 'niben044scf00019580ctg005_330-8869' '(at4g30620 : 201.0) Uncharacterised BCR, YbaB family COG0718; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0133 (InterPro:IPR004401); BEST Arabidopsis thaliana protein match is: Uncharacterised BCR, YbaB family COG0718 (TAIR:AT2G24020.2); Has 1854 Blast hits to 1854 proteins in 759 species: Archae - 0; Bacteria - 1576; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative ybaB, Description = Nucleoid-associated protein ybaB, PFAM = PF02575)' T '35.2' 'not assigned.unknown' 'niben044scf00019605ctg012_3016-7549' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00019655ctg005_3825-9027' ' no hits & (original description: Putative , Description = , PFAM = PF14826;PF14826)' T '35.2' 'not assigned.unknown' 'niben044scf00019662ctg005_12196-15517' ' no hits & (original description: Putative BnaC02g14800D, Description = BnaC02g14800D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00019703ctg001_1926-3352' ' no hits & (original description: Putative PGSC0003DMG400006003, Description = Nematode resistance-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00019709ctg001_11472-19168' '(at3g48770 : 1550.0) DNA binding;ATP binding; FUNCTIONS IN: DNA binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, BED-type predicted (InterPro:IPR003656), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28020.1); Has 779 Blast hits to 661 proteins in 171 species: Archae - 6; Bacteria - 159; Metazoa - 152; Fungi - 67; Plants - 310; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (reliability: 3100.0) & (original description: Putative MTR_8g090165, Description = ATP/DNA-binding protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00019709ctg001_11475-18383' '(at3g48770 : 682.0) DNA binding;ATP binding; FUNCTIONS IN: DNA binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, BED-type predicted (InterPro:IPR003656), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28020.1); Has 779 Blast hits to 661 proteins in 171 species: Archae - 6; Bacteria - 159; Metazoa - 152; Fungi - 67; Plants - 310; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (reliability: 1364.0) & (original description: Putative At3g48770, Description = ATP/DNA-binding protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00019758ctg000_3921-7459' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00019799ctg006_846-4076' '(at4g29660 : 127.0) EMBRYO DEFECTIVE 2752 (EMB2752); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative EMB2752, Description = Uncharacterized protein At4g29660, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00019824ctg000_8598-11310' ' no hits & (original description: Putative , Description = Putative membrane-associated kinase regulator 1-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00019825ctg006_3946-5665' ' no hits & (original description: Putative 20.t00041, Description = Integrase core domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00019833ctg003_9427-12142' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00019845ctg003_4691-7475' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben044scf00019850ctg001_1-3216' ' no hits & (original description: Putative glysoja_041323, Description = F7F22.15, PFAM = PF13650)' T '35.2' 'not assigned.unknown' 'niben044scf00019867ctg004_3905-8633' ' no hits & (original description: Putative , Description = , PFAM = PF13923)' T '35.2' 'not assigned.unknown' 'niben044scf00019892ctg004_2704-5018' ' no hits & (original description: Putative PGSC0003DMG400023652, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00019924ctg009_971-3543' '(gnl|cdd|71349 : 106.0) no description available & (at1g72510 : 81.6) Protein of unknown function (DUF1677); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1677, plant (InterPro:IPR012876); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1677) (TAIR:AT2G09970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative BnaA02g05020D, Description = BnaA02g05020D protein, PFAM = PF07911)' T '35.2' 'not assigned.unknown' 'niben044scf00019943ctg003_1824-8080' '(at1g36320 : 493.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37920.1); Has 93 Blast hits to 90 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 986.0) & (original description: Putative At4g37920, Description = Uncharacterized protein At4g37920, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00019943ctg003_2172-5688' '(at1g36320 : 231.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37920.1); Has 93 Blast hits to 90 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative At1g36320, Description = Plant/F7F23-4 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00019954ctg001_7886-10844' ' no hits & (original description: Putative At2g42760, Description = At2g42760, PFAM = PF07939)' T '35.2' 'not assigned.unknown' 'niben044scf00020037ctg002_1-12099' '(at3g11760 : 743.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1486.0) & (original description: Putative At5g04860, Description = Multidrug and toxic compound extrusion protein, PFAM = PF10358)' T '35.2' 'not assigned.unknown' 'niben044scf00020047ctg000_4712-10881' '(at3g25805 : 390.0) unknown protein; Has 98 Blast hits to 98 proteins in 45 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 780.0) & (original description: Putative PGSC0003DMG401015876, Description = B1358B12.10 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00020069ctg002_3383-5301' ' no hits & (original description: Putative PGSC0003DMG400014888, Description = RNase H family protein, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'niben044scf00020101ctg004_1105-4688' '(at1g53380 : 413.0) Plant protein of unknown function (DUF641); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF641) (TAIR:AT3G14870.1); Has 313 Blast hits to 310 proteins in 37 species: Archae - 0; Bacteria - 16; Metazoa - 2; Fungi - 2; Plants - 281; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|68434 : 143.0) no description available & (reliability: 826.0) & (original description: Putative BnaC03g76000D, Description = BnaC03g76000D protein, PFAM = PF04859)' T '35.2' 'not assigned.unknown' 'niben044scf00020130ctg006_1-3045' '(at5g55640 : 116.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative PGSC0003DMG400022173, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00020144ctg000_142-2879' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00020178ctg010_1293-5348' '(at3g60810 : 252.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1499 (InterPro:IPR010865); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34126 : 96.2) no description available & (reliability: 504.0) & (original description: Putative , Description = , PFAM = PF07386)' T '35.2' 'not assigned.unknown' 'niben044scf00020222ctg007_954-6523' '(at5g17670 : 374.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: intracellular protein transport, GPI anchor metabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PGAP1-like (InterPro:IPR012908); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 748.0) & (original description: Putative BnaAnng15970D, Description = BnaAnng15970D protein, PFAM = PF07819)' T '35.2' 'not assigned.unknown' 'niben044scf00020233ctg005_1395-3227' '(at1g53040 : 139.0) Protein of unknown function (DUF616); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF616 (InterPro:IPR006852); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF616) (TAIR:AT1G28240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68342 : 120.0) no description available & (reliability: 278.0) & (original description: Putative EMB2756, Description = DUF616 family protein, PFAM = PF04765)' T '35.2' 'not assigned.unknown' 'niben044scf00020265ctg001_9012-11453' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00020275ctg008_7873-13398' '(at5g14310 : 591.0) carboxyesterase 16 (CXE16); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36728 : 258.0) no description available & (gnl|cdd|87389 : 180.0) no description available & (q6l545|gid1_orysa : 114.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 1182.0) & (original description: Putative CXE7, Description = CXE carboxylesterase, PFAM = PF07859)' T '35.2' 'not assigned.unknown' 'niben044scf00020327ctg001_6197-7784' ' no hits & (original description: Putative Pvr9, Description = NBS-LRR resistance protein-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00020335ctg000_455-3396' ' (original description: Putative m14, Description = Putative MADS-domain transcription factor, PFAM = PF00319)' T '35.2' 'not assigned.unknown' 'niben044scf00020343ctg002_21874-24475' ' no hits & (original description: Putative , Description = , PFAM = PF15365)' T '35.2' 'not assigned.unknown' 'niben044scf00020351ctg002_16382-22767' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00020377ctg018_497-2663' '(at5g24860 : 131.0) encodes a small protein of 12.6 kDa that regulates flowering and is involved in gibberellin signalling pathway. It is expressed in apical meristems immediately after the photoperiodic induction of flowering. Genetic interactions with flowering time and floral organ identity genes suggest that this gene may be involved in modulating the competence to flower. There are two other genes similar to FPF1, FLP1 (At4g31380) and FLP2 (no locus name yet, on BAC F8F16 on chr 4). This is so far a plant-specific gene and is only found in long-day mustard, arabidopsis, and rice.; FLOWERING PROMOTING FACTOR 1 (FPF1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to gibberellin stimulus, positive regulation of flower development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10625.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative RAA1, Description = Flowering-promoting factor 1-like protein 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00020385ctg008_5515-15217' '(at3g63170 : 252.0) Chalcone-flavanone isomerase family protein; FUNCTIONS IN: intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT2G26310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 504.0) & (original description: Putative FAP1, Description = Fatty-acid-binding protein 1, PFAM = PF16035)' T '35.2' 'not assigned.unknown' 'niben044scf00020400ctg001_1967-5169' ' no hits & (original description: Putative glysoja_043005, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00020413ctg008_6422-8823' ' (original description: Putative Tcs1, Description = Retrotransposon protein, putative, Ty1-copia subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00020422ctg004_2738-5128' '(at3g26750 : 100.0) CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme E2C-binding protein (InterPro:IPR019193); Has 26 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative , Description = Isoleucine--trna ligase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00020422ctg005_1-2205' '(at3g26750 : 121.0) CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme E2C-binding protein (InterPro:IPR019193); Has 26 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative glysoja_000182, Description = Isoleucine--trna ligase, PFAM = PF09814)' T '35.2' 'not assigned.unknown' 'niben044scf00020488ctg003_1-3727' ' no hits & (original description: Putative , Description = , PFAM = PF13960)' T '35.2' 'not assigned.unknown' 'niben044scf00020490ctg008_7666-12427' ' (original description: Putative Os03g0598200, Description = Nucleolar protein 14, PFAM = PF04147)' T '35.2' 'not assigned.unknown' 'niben044scf00020528ctg006_5572-11692' ' no hits & (original description: Putative IQD5, Description = BnaAnng00890D protein, PFAM = PF00612;PF13178)' T '35.2' 'not assigned.unknown' 'niben044scf00020556ctg004_9763-11474' ' no hits & (original description: Putative orf159a, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00020565ctg008_2365-9324' '(at3g04470 : 781.0) Ankyrin repeat family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Protein of unknown function DUF3424 (InterPro:IPR021832), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT1G04780.1); Has 1133 Blast hits to 894 proteins in 124 species: Archae - 0; Bacteria - 10; Metazoa - 597; Fungi - 29; Plants - 361; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (gnl|cdd|35742 : 481.0) no description available & (reliability: 1562.0) & (original description: Putative BnaC09g02820D, Description = BnaC09g02820D protein, PFAM = PF11904)' T '35.2' 'not assigned.unknown' 'niben044scf00020601ctg010_16960-19274' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00020628ctg003_3214-7713' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00020657ctg014_3295-10434' '(at4g26980 : 327.0) RNI-like superfamily protein; Has 687 Blast hits to 557 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 376; Fungi - 15; Plants - 236; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (reliability: 654.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00020676ctg011_991-9492' '(at4g32330 : 144.0) TPX2 (targeting protein for Xklp2) protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT2G25480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative WDL6, Description = Protein WVD2-like 6, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'niben044scf00020706ctg019_4273-7223' ' no hits & (original description: Putative PGSC0003DMG400031146, Description = , PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'niben044scf00020712ctg010_920-3356' ' no hits & (original description: Putative PGSC0003DMG400034382, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00020712ctg010_2666-5732' ' no hits & (original description: Putative Os04g0578900, Description = Mutator-like transposase, PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'niben044scf00020724ctg000_1078-3636' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00020732ctg014_5790-11141' '(at1g67140 : 221.0) SWEETIE (SWEETIE); FUNCTIONS IN: binding; INVOLVED IN: trehalose metabolic process, carbohydrate metabolic process, starch metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024). & (gnl|cdd|37033 : 97.4) no description available & (reliability: 442.0) & (original description: Putative Os06g0505100, Description = HEAT repeat-containing protein isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00020749ctg001_1-3029' ' no hits & (original description: Putative RPS30A, Description = 40S ribosomal protein S30, PFAM = PF04758)' T '35.2' 'not assigned.unknown' 'niben044scf00020760ctg001_1-652' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00020771ctg007_1-4892' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00020800ctg003_1017-3509' ' no hits & (original description: Putative , Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00020807ctg001_826-3149' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00020818ctg000_1-2043' ' no hits & (original description: Putative , Description = Putative crossover junction endonuclease EME1B-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00020891ctg005_4570-8815' ' no hits & (original description: Putative PGSC0003DMG400010287, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00020894ctg006_33049-34211' ' no hits & (original description: Putative RT, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00020956ctg002_48028-51410' '(at2g36430 : 230.0) Plant protein of unknown function (DUF247); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G22550.2); Has 1137 Blast hits to 1027 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66792 : 201.0) no description available & (reliability: 460.0) & (original description: Putative At2g36430, Description = At5g22540, PFAM = PF03140)' T '35.2' 'not assigned.unknown' 'niben044scf00021053ctg000_7947-11131' '(at5g54530 : 186.0) Protein of unknown function, DUF538; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT1G61667.1); Has 418 Blast hits to 418 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 418; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86647 : 119.0) no description available & (reliability: 372.0) & (original description: Putative mc304, Description = Transmembrane protein, putative, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben044scf00021085ctg000_7341-9497' '(at1g70420 : 120.0) Protein of unknown function (DUF1645); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT1G23710.1); Has 179 Blast hits to 179 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 162; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|71256 : 100.0) no description available & (reliability: 240.0) & (original description: Putative F17O7.4, Description = At1g70420/F17O7_4, PFAM = PF07816)' T '35.2' 'not assigned.unknown' 'niben044scf00021168ctg015_1310-3700' ' no hits & (original description: Putative At5g58375, Description = At5g58375, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00021191ctg004_5325-8111' ' no hits & (original description: Putative ZFP5, Description = C2H2 zinc finger protein 5, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00021207ctg001_1164-4434' ' (original description: Putative SN2, Description = Snakin-2, PFAM = PF02704)' T '35.2' 'not assigned.unknown' 'niben044scf00021296ctg001_14417-19802' '(at5g38720 : 152.0) unknown protein; Has 13419 Blast hits to 9093 proteins in 698 species: Archae - 38; Bacteria - 1038; Metazoa - 4949; Fungi - 1086; Plants - 485; Viruses - 44; Other Eukaryotes - 5779 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative PGSC0003DMG400010100, Description = Ribosomal RNA-processing protein, PFAM = PF12923)' T '35.2' 'not assigned.unknown' 'niben044scf00021317ctg001_5838-8179' ' no hits & (original description: Putative orf118, Description = Orf118, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00021360ctg001_13801-17086' ' no hits & (original description: Putative PGSC0003DMG400007384, Description = EG45-like domain containing protein, PFAM = PF03330)' T '35.2' 'not assigned.unknown' 'niben044scf00021406ctg009_2494-4738' '(at4g37445 : 131.0) BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT1G64850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative BnaC01g01460D, Description = BnaC01g01460D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00021409ctg008_1-6469' '(at1g64680 : 206.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits to 146 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative PHYPADRAFT_131575, Description = Predicted protein, PFAM = PF13225)' T '35.2' 'not assigned.unknown' 'niben044scf00021436ctg000_1-752' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00021444ctg006_1-4902' '(at2g32760 : 183.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38107 : 102.0) no description available & (reliability: 366.0) & (original description: Putative At2g32755, Description = At2g32760, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00021449ctg013_1057-4368' '(at5g24130 : 218.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative At5g24130, Description = At5g24130, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00021506ctg006_12638-17650' '(at3g63430 : 193.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74160.1); Has 135 Blast hits to 119 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 3; Plants - 119; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 386.0) & (original description: Putative PGSC0003DMG400022986, Description = At3g63430, PFAM = PF14309;PF14383)' T '35.2' 'not assigned.unknown' 'niben044scf00021615ctg013_94-8530' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00021616ctg012_1-8201' '(at2g28480 : 344.0) RNA-binding CRS1 / YhbY (CRM) domain protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain protein (TAIR:AT4G13070.1); Has 308 Blast hits to 279 proteins in 29 species: Archae - 0; Bacteria - 5; Metazoa - 22; Fungi - 0; Plants - 268; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|37201 : 163.0) no description available & (gnl|cdd|85815 : 95.6) no description available & (reliability: 688.0) & (original description: Putative cfm6, Description = Putative CRM domain-containing protein, chloroplastic, PFAM = PF01985)' T '35.2' 'not assigned.unknown' 'niben044scf00021646ctg004_2280-4719' ' (original description: Putative RT, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00021646ctg006_10276-16470' '(at3g19220 : 181.0) Encodes a zinc finger protein that is similar to a subgroup of DnaJ and is involved in cotyledon chloroplast biogenesis. Cyo1 is localized to the thylakoid membrane and has protein disulfide isomerase activity in vivo.Cyo1 is more highly expressed in light grown seedlings. Loss of function mutants have albino cotyledons and abnormal plastids.; SNOWY COTYLEDON 2 (SCO2); Has 34 Blast hits to 34 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative CYO1, Description = Protein disulfide-isomerase SCO2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00021658ctg002_7766-10350' ' no hits & (original description: Putative PGSC0003DMG400018772, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00021753ctg005_9276-10489' ' no hits & (original description: Putative Os12g0499874, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00021792ctg006_1989-7602' '(at3g59800 : 127.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G43795.2); Has 15361 Blast hits to 8061 proteins in 537 species: Archae - 2; Bacteria - 622; Metazoa - 7561; Fungi - 1246; Plants - 920; Viruses - 49; Other Eukaryotes - 4961 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative B9008, Description = Os04g0496600 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00021832ctg007_1-11896' '(at4g00450 : 1690.0) Encodes the Arabidopsis homolog of the transcriptional regulator MED12, is dynamically expressed during embryogenesis and regulates both developmental timing and the radial pattern formation. Involved in flowering time. The mutant enhances the expression of the flowering time (FT) gene. A knockout mutant of this gene showed late-flowering phenotype.; CENTER CITY (CCT); FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: photoperiodism, flowering, regulation of development, heterochronic, regulation of radial pattern formation; LOCATED IN: mediator complex, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med12 (InterPro:IPR019035); Has 216 Blast hits to 184 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 65; Plants - 86; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|39722 : 530.0) no description available & (reliability: 3380.0) & (original description: Putative MED12, Description = Mediator of RNA polymerase II transcription subunit 12, PFAM = PF09497)' T '35.2' 'not assigned.unknown' 'niben044scf00021853ctg002_3153-13047' '(at3g16730 : 491.0) CONTAINS InterPro DOMAIN/s: Non-SMC condensin II complex, subunit H2-like (InterPro:IPR009378); Has 249 Blast hits to 211 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 8; Plants - 30; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|37570 : 356.0) no description available & (reliability: 982.0) & (original description: Putative CAPH2, Description = Condensin-2 complex subunit H2, PFAM = PF06278;PF16858;PF16869)' T '35.2' 'not assigned.unknown' 'niben044scf00021873ctg014_23010-25731' ' no hits & (original description: Putative , Description = , PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'niben044scf00021895ctg003_1-5857' '(at1g69380 : 298.0) Protein of unknown function (DUF155); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF155 (InterPro:IPR003734); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF155) (TAIR:AT5G13610.1); Has 567 Blast hits to 567 proteins in 242 species: Archae - 0; Bacteria - 202; Metazoa - 8; Fungi - 221; Plants - 79; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|38072 : 177.0) no description available & (reliability: 596.0) & (original description: Putative pco138889, Description = AT5g13610/MSH12_7, PFAM = PF02582)' T '35.2' 'not assigned.unknown' 'niben044scf00021903ctg006_1-1522' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00021908ctg009_5106-10122' ' no hits & (original description: Putative glysoja_028901, Description = Glycine-rich RNA-binding protein 2, mitochondrial, PFAM = PF00076)' T '35.2' 'not assigned.unknown' 'niben044scf00021924ctg001_18644-22453' '(at5g39520 : 153.0) Protein of unknown function (DUF1997); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1997 (InterPro:IPR018971); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1997) (TAIR:AT5G39530.1); Has 157 Blast hits to 157 proteins in 60 species: Archae - 0; Bacteria - 84; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative , Description = , PFAM = PF09366)' T '35.2' 'not assigned.unknown' 'niben044scf00021924ctg007_12129-16261' '(at5g39570 : 82.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G29075.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative At5g39570, Description = Uncharacterized protein At5g39570, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00021928ctg012_3988-6318' ' no hits & (original description: Putative , Description = , PFAM = PF13963)' T '35.2' 'not assigned.unknown' 'niben044scf00021942ctg004_1-1702' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00021954ctg002_25083-27584' ' (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00022004ctg006_1-3072' ' no hits & (original description: Putative , Description = Putative pre-rRNA-processing protein las1-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00022040ctg003_2664-7744' '(at1g53560 : 119.0) Ribosomal protein L18ae family; BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT1G17080.1); Has 133 Blast hits to 133 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 127; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative RPL18aA, Description = 60S ribosomal protein L18aA, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00022070ctg000_1354-3728' ' no hits & (original description: Putative orf125b, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00022070ctg003_1042-7407' '(at2g20740 : 285.0) Tetraspanin family protein; BEST Arabidopsis thaliana protein match is: Tetraspanin family protein (TAIR:AT2G20230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 570.0) & (original description: Putative TOM2AH3, Description = Tetraspanin-19, PFAM = PF00335)' T '35.2' 'not assigned.unknown' 'niben044scf00022081ctg002_9166-11624' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00022082ctg002_1-1794' ' no hits & (original description: Putative , Description = , PFAM = PF08137)' T '35.2' 'not assigned.unknown' 'niben044scf00022143ctg000_29011-32558' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00022174ctg011_1-1799' ' no hits & (original description: Putative rt, Description = Reverse transcriptase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00022184ctg008_1-6602' '(at1g15060 : 501.0) Uncharacterised conserved protein UCP031088, alpha/beta hydrolase; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase, At1g15070 (InterPro:IPR016969), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase (TAIR:AT1G73750.1); Has 177 Blast hits to 156 proteins in 44 species: Archae - 2; Bacteria - 72; Metazoa - 2; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 1002.0) & (original description: Putative PGSC0003DMG400026880, Description = Alpha/beta fold hydrolase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00022206ctg005_7922-10812' ' no hits & (original description: Putative PGSC0003DMG400009144, Description = Polyphosphoinositide phosphatase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00022233ctg003_21067-24032' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben044scf00022233ctg003_21457-24083' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00022234ctg005_1-24846' ' no hits & (original description: Putative ldpA, Description = Light dependent period modulator LdpA, PFAM = PF12617)' T '35.2' 'not assigned.unknown' 'niben044scf00022234ctg010_11950-13924' ' (original description: Putative PGSC0003DMG400019390, Description = Callose synthase 9, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00022314ctg007_7334-11248' '(at2g20930 : 164.0) SNARE-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, ER to Golgi vesicle-mediated transport; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sedlin (InterPro:IPR006722), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT1G80500.1); Has 516 Blast hits to 516 proteins in 166 species: Archae - 0; Bacteria - 0; Metazoa - 260; Fungi - 97; Plants - 87; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (gnl|cdd|38654 : 102.0) no description available & (gnl|cdd|86702 : 100.0) no description available & (reliability: 328.0) & (original description: Putative trappc2l, Description = Trafficking protein particle complex subunit 2-like protein, PFAM = PF04628)' T '35.2' 'not assigned.unknown' 'niben044scf00022326ctg004_1-1819' ' no hits & (original description: Putative glysoja_030340, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF13976)' T '35.2' 'not assigned.unknown' 'niben044scf00022330ctg004_5559-7732' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00022339ctg011_1472-7695' '(gnl|cdd|71337 : 190.0) no description available & (at5g48385 : 145.0) FRIGIDA-like protein; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT4G14900.1); Has 1269 Blast hits to 1187 proteins in 101 species: Archae - 0; Bacteria - 22; Metazoa - 72; Fungi - 9; Plants - 1133; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|35383 : 84.1) no description available & (reliability: 290.0) & (original description: Putative , Description = Putative myosin-10-like, PFAM = PF07899;PF07899;PF07899)' T '35.2' 'not assigned.unknown' 'niben044scf00022368ctg000_1182-3990' ' no hits & (original description: Putative hAT1, Description = Zinc finger MYM-type protein 1, PFAM = PF05699;PF14291)' T '35.2' 'not assigned.unknown' 'niben044scf00022406ctg031_3646-8911' '(at4g17790 : 364.0) SNARE associated Golgi protein family; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT1G71940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38350 : 226.0) no description available & (reliability: 728.0) & (original description: Putative gtk16, Description = Gtk16 protein, PFAM = PF09335)' T '35.2' 'not assigned.unknown' 'niben044scf00022415ctg000_1-2006' ' no hits & (original description: Putative orf171a, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00022415ctg002_255-5653' '(at3g59670 : 257.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37440.2); Has 77 Blast hits to 77 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 514.0) & (original description: Putative PGSC0003DMG400008716, Description = 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase eta-1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00022441ctg001_1-5653' '(at1g70480 : 355.0) Domain of unknown function (DUF220); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF220 (InterPro:IPR003863); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF220) (TAIR:AT1G23560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66402 : 105.0) no description available & (reliability: 710.0) & (original description: Putative Sb02g022180, Description = F28C11.19, PFAM = PF02713)' T '35.2' 'not assigned.unknown' 'niben044scf00022442ctg004_1-1376' ' no hits & (original description: Putative At2g10660, Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00022468ctg006_290-7298' '(at1g21350 : 282.0) Thioredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|48518 : 202.0) no description available & (reliability: 564.0) & (original description: Putative trxA, Description = Thiol-disulfide isomerase or thioredoxin, PFAM = PF00578)' T '35.2' 'not assigned.unknown' 'niben044scf00022474ctg010_5912-7249' ' no hits & (original description: Putative Os12g0499874, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00022484ctg000_21717-26039' '(at2g01340 : 165.0) Encodes a protein whose expression is responsive to nematode infection.; At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, response to nematode; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 110 Blast hits to 110 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 330.0) & (original description: Putative At17.1, Description = At2g01340, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben044scf00022502ctg010_11333-13932' ' no hits & (original description: Putative PGSC0003DMG400035191, Description = , PFAM = PF11744)' T '35.2' 'not assigned.unknown' 'niben044scf00022504ctg013_7004-13803' '(at2g35680 : 333.0) Phosphotyrosine protein phosphatases superfamily protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, protein tyrosine/serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: Phosphotyrosine protein phosphatases superfamily protein (TAIR:AT5G56610.1); Has 1976 Blast hits to 1976 proteins in 288 species: Archae - 41; Bacteria - 150; Metazoa - 1097; Fungi - 157; Plants - 204; Viruses - 23; Other Eukaryotes - 304 (source: NCBI BLink). & (gnl|cdd|36931 : 248.0) no description available & (gnl|cdd|29029 : 88.4) no description available & (reliability: 666.0) & (original description: Putative DSP8, Description = Putative dual specificity protein phosphatase DSP8, PFAM = PF00782)' T '35.2' 'not assigned.unknown' 'niben044scf00022659ctg011_251-2404' ' no hits & (original description: Putative CN, Description = TMV resistance protein N, PFAM = PF01582)' T '35.2' 'not assigned.unknown' 'niben044scf00022697ctg005_1-3231' ' no hits & (original description: Putative PTS, Description = KNOX meinox, putative, PFAM = PF03791)' T '35.2' 'not assigned.unknown' 'niben044scf00022716ctg005_4814-7333' ' no hits & (original description: Putative FGENESH1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00022716ctg005_4835-7441' ' no hits & (original description: Putative FGENESH1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben044scf00022765ctg001_1-8317' ' no hits & (original description: Putative PGSC0003DMG401021870, Description = Salt-inducible protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00022843ctg014_404-3860' '(at5g41470 : 102.0) Nuclear transport factor 2 (NTF2) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT1G71480.1); Has 94 Blast hits to 92 proteins in 28 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00022843ctg015_15272-21244' ' no hits & (original description: Putative Os03g0703300, Description = Putative dentin sialophosphoprotein-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00022848ctg001_3485-6770' '(at4g39820 : 396.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); Has 285 Blast hits to 281 proteins in 117 species: Archae - 4; Bacteria - 22; Metazoa - 124; Fungi - 26; Plants - 36; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|38007 : 328.0) no description available & (reliability: 792.0) & (original description: Putative At4g39820, Description = At4g39820, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00022894ctg001_3226-6223' ' no hits & (original description: Putative h1, Description = Histone H1, PFAM = PF00538)' T '35.2' 'not assigned.unknown' 'niben044scf00022954ctg003_1-6118' '(at4g30200 : 244.0) Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.; vernalization5/VIN3-like (VEL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vegetative to reproductive phase transition of meristem; LOCATED IN: PcG protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423, plant (InterPro:IPR004082), Fibronectin, type III-like fold (InterPro:IPR008957), Fibronectin, type III (InterPro:IPR003961); BEST Arabidopsis thaliana protein match is: Fibronectin type III domain-containing protein (TAIR:AT5G57380.1). & (reliability: 488.0) & (original description: Putative VEL1, Description = BnaC03g12980D protein, PFAM = PF07227)' T '35.2' 'not assigned.unknown' 'niben044scf00023087ctg006_1-1821' ' no hits & (original description: Putative PGSC0003DMG400016007, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00023129ctg013_1-2627' ' no hits & (original description: Putative , Description = , PFAM = PF15264)' T '35.2' 'not assigned.unknown' 'niben044scf00023129ctg032_1-925' ' no hits & (original description: Putative , Description = Zinc finger containing preotein, putative, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben044scf00023137ctg002_4478-12981' '(at5g28350 : 524.0) Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Ribosome control protein 1 (InterPro:IPR009771), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Quinoprotein amine dehydrogenase, beta chain-like (InterPro:IPR011044); BEST Arabidopsis thaliana protein match is: Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor (TAIR:AT3G61480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37217 : 275.0) no description available & (gnl|cdd|70524 : 222.0) no description available & (reliability: 1048.0) & (original description: Putative At5g28350, Description = Quinoprotein amine dehydrogenase, beta chain-like / RIC1-like guanyl-nucleotide exchange factor, PFAM = PF07064)' T '35.2' 'not assigned.unknown' 'niben044scf00023195ctg011_444-7334' '(gnl|cdd|68458 : 289.0) no description available & (gnl|cdd|39450 : 265.0) no description available & (at5g01510 : 234.0) ROOT UV-B SENSITIVE 5 (RUS5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT3G45890.1); Has 426 Blast hits to 424 proteins in 125 species: Archae - 0; Bacteria - 2; Metazoa - 111; Fungi - 69; Plants - 183; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative MTR_7g068310, Description = UPF0420 C16orf58-like protein, PFAM = PF04884)' T '35.2' 'not assigned.unknown' 'niben044scf00023227ctg002_5315-12898' '(at1g80000 : 124.0) CASC3/Barentsz eIF4AIII binding; CONTAINS InterPro DOMAIN/s: CASC3/Barentsz eIF4AIII binding (InterPro:IPR018545); BEST Arabidopsis thaliana protein match is: CASC3/Barentsz eIF4AIII binding (TAIR:AT1G15280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative , Description = Glycine-rich family protein, PFAM = PF09405)' T '35.2' 'not assigned.unknown' 'niben044scf00023242ctg006_1-1062' ' no hits & (original description: Putative NbNup88a, Description = Nuclear pore complex protein Nup88a, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00023258ctg001_16548-19207' '(at5g66230 : 187.0) Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1). & (reliability: 374.0) & (original description: Putative At5g66230, Description = At5g66230, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00023286ctg002_769-5178' '(at2g24530 : 238.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 476.0) & (original description: Putative BnaA09g41350D, Description = Transcriptional coactivator Hfi1/Transcriptional adapter 1, PFAM = PF12767)' T '35.2' 'not assigned.unknown' 'niben044scf00023295ctg001_5678-8099' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00023296ctg013_3361-10290' '(at5g14600 : 438.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: tRNA (adenine-N1-)-methyltransferase activity; INVOLVED IN: tRNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: tRNA methyltransferase complex GCD14 subunit (InterPro:IPR014816); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72128 : 402.0) no description available & (gnl|cdd|38126 : 371.0) no description available & (reliability: 876.0) & (original description: Putative cpd1, Description = tRNA methyltransferase complex GCD14 subunit, PFAM = PF08704)' T '35.2' 'not assigned.unknown' 'niben044scf00023313ctg011_2628-8877' '(at5g13590 : 97.4) unknown protein; Has 150 Blast hits to 121 proteins in 42 species: Archae - 0; Bacteria - 8; Metazoa - 80; Fungi - 5; Plants - 17; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 194.8) & (original description: Putative PGSC0003DMG400011483, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00023321ctg000_5325-10210' '(at5g55960 : 816.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0118 (InterPro:IPR002549); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37576 : 496.0) no description available & (reliability: 1632.0) & (original description: Putative BnaA10g10060D, Description = BnaA10g10060D protein, PFAM = PF01594)' T '35.2' 'not assigned.unknown' 'niben044scf00023329ctg008_1832-5577' '(gnl|cdd|66792 : 234.0) no description available & (at3g50130 : 151.0) Plant protein of unknown function (DUF247); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: leaf apex, root, flower, carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50140.1); Has 12220 Blast hits to 6577 proteins in 475 species: Archae - 26; Bacteria - 903; Metazoa - 4175; Fungi - 967; Plants - 4043; Viruses - 563; Other Eukaryotes - 1543 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative PGSC0003DMG400008157, Description = DUF247 domain protein, PFAM = PF03140)' T '35.2' 'not assigned.unknown' 'niben044scf00023350ctg010_1817-11177' '(at3g19570 : 333.0) Encodes SCO3 (snowy cotyledon3), a member of a largely uncharacterized protein family unique to the plant kingdom. The sco3-1 mutation alters chloroplast morphology and development, reduces chlorophyll accumulation, impairs thylakoid formation and photosynthesis in seedlings, and results in photoinhibition under extreme CO(2) concentrations in mature leaves. SCO3 is targeted to the periphery of peroxisomes.; Family of unknown function (DUF566) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 (InterPro:IPR007573); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) (TAIR:AT1G49890.1); Has 4892 Blast hits to 1821 proteins in 299 species: Archae - 6; Bacteria - 1294; Metazoa - 1107; Fungi - 667; Plants - 251; Viruses - 59; Other Eukaryotes - 1508 (source: NCBI BLink). & (gnl|cdd|68069 : 239.0) no description available & (reliability: 666.0) & (original description: Putative SCO3, Description = Protein SNOWY COTYLEDON 3, PFAM = PF04484)' T '35.2' 'not assigned.unknown' 'niben044scf00023368ctg000_2386-5952' '(at3g29170 : 116.0) Eukaryotic protein of unknown function (DUF872); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0414, transmembrane (InterPro:IPR008590); BEST Arabidopsis thaliana protein match is: Eukaryotic protein of unknown function (DUF872) (TAIR:AT2G19350.1); Has 245 Blast hits to 245 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 137; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|39950 : 101.0) no description available & (gnl|cdd|69438 : 99.7) no description available & (reliability: 232.0) & (original description: Putative BnaA02g29730D, Description = BnaA02g29730D protein, PFAM = PF05915)' T '35.2' 'not assigned.unknown' 'niben044scf00023391ctg028_7316-9113' '(at2g39170 : 144.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function NEP (InterPro:IPR019320); Has 57 Blast hits to 57 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|39723 : 129.0) no description available & (reliability: 288.0) & (original description: Putative Os08g0152500, Description = Os08g0152500 protein, PFAM = PF10167)' T '35.2' 'not assigned.unknown' 'niben044scf00023436ctg007_1-429' '(gnl|cdd|73154 : 99.5) no description available & (atmg00860 : 91.3) hypothetical protein; DNA/RNA polymerases superfamily protein. & (reliability: 182.6) & (original description: Putative Tgt1ORF2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00023469ctg001_13480-17390' '(q8lhp0|elof1_orysa : 135.0) Transcription elongation factor 1 homolog - Oryza sativa (Rice) & (at5g46030 : 118.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF701, zinc-binding putative (InterPro:IPR007808); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38424 : 111.0) no description available & (gnl|cdd|34497 : 84.3) no description available & (reliability: 236.0) & (original description: Putative elof1, Description = Transcription elongation factor 1, PFAM = PF05129)' T '35.2' 'not assigned.unknown' 'niben044scf00023484ctg015_1-2825' ' no hits & (original description: Putative , Description = , PFAM = PF13962)' T '35.2' 'not assigned.unknown' 'niben044scf00023511ctg007_3392-8294' '(at5g63540 : 297.0) Encodes RMI1. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates.; RECQ MEDIATED INSTABILITY 1 (RMI1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: meiosis, double-strand break repair via homologous recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, inflorescence meristem, sperm cell, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1767 (InterPro:IPR013894); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF1767) (TAIR:AT5G19950.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 594.0) & (original description: Putative RMI1, Description = RecQ-mediated genome instability protein 1, PFAM = PF08585)' T '35.2' 'not assigned.unknown' 'niben044scf00023511ctg018_4331-5000' ' no hits & (original description: Putative , Description = , PFAM = PF00098)' T '35.2' 'not assigned.unknown' 'niben044scf00023519ctg003_5388-9900' '(at2g29670 : 443.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G07280.3); Has 535 Blast hits to 340 proteins in 62 species: Archae - 10; Bacteria - 119; Metazoa - 2; Fungi - 0; Plants - 351; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 886.0) & (original description: Putative At2g29670, Description = Putative uncharacterized protein At2g29670, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00023526ctg009_3781-8207' '(at5g58600 : 445.0) Belongs to a large family of plant-specific genes of unknown function. Involved in resistance to the powdery mildew species Erysiphe cichoracearum and Erysiphe orontii, but not to the unrelated pathogens Pseudomonas syringae or Peronospora parasitica. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; POWDERY MILDEW RESISTANT 5 (PMR5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 45 (TAIR:AT2G30010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72785 : 166.0) no description available & (reliability: 890.0) & (original description: Putative PMR5, Description = Protein PMR5, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben044scf00023529ctg003_1-3996' '(at4g25770 : 243.0) alpha/beta-Hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G10040.1). & (gnl|cdd|39573 : 133.0) no description available & (gnl|cdd|68625 : 86.2) no description available & (reliability: 486.0) & (original description: Putative Sb07g022000, Description = Putative uncharacterized protein Sb07g022000, PFAM = PF05057)' T '35.2' 'not assigned.unknown' 'niben044scf00023544ctg011_4666-6064' ' no hits & (original description: Putative YG31B, Description = Transposon Ty3-G Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00023631ctg001_2893-5192' ' no hits & (original description: Putative BnaC05g20370D, Description = Retrotransposon protein, putative, Ty1-copia subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00023644ctg000_560-3287' ' (original description: Putative PGSC0003DMG400004745, Description = PnFL-1, PFAM = PF01569)' T '35.2' 'not assigned.unknown' 'niben044scf00023647ctg023_8620-11515' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben044scf00023694ctg011_4495-7664' ' (original description: Putative erf, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'niben044scf00023708ctg002_4193-10331' '(at2g47115 : 195.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative BnaC03g72460D, Description = BnaC03g72460D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00023708ctg006_1-6312' '(at2g47115 : 186.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative PGSC0003DMG400007296, Description = BnaC03g72460D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00023724ctg003_2999-5767' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00023765ctg005_1-2925' ' no hits & (original description: Putative str246N, Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00023821ctg002_1-5989' '(at4g35240 : 508.0) Protein of unknown function (DUF630 and DUF632); EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT2G17110.1). & (gnl|cdd|68357 : 294.0) no description available & (reliability: 1016.0) & (original description: Putative PGSC0003DMG400016824, Description = BZIP transcription factor bZIP107, PFAM = PF04782;PF04783)' T '35.2' 'not assigned.unknown' 'niben044scf00023827ctg007_374-2895' '(at5g12470 : 117.0) Protein of unknown function (DUF3411); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF399 and DUF3411) (TAIR:AT2G40400.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative RER4, Description = DUF3411 domain protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00023865ctg028_1-1943' ' no hits & (original description: Putative T15F17.k, Description = Retrotransposon protein, putative, Ty1-copia subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00023875ctg001_18998-21485' ' no hits & (original description: Putative At2g06320, Description = Retroelement pol polyprotein-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00023881ctg002_12532-16198' ' no hits & (original description: Putative PGSC0003DMG400004241, Description = , PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben044scf00023914ctg003_3961-6029' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00023917ctg004_1-1799' ' no hits & (original description: Putative GRF3, Description = AtGRF3, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00024008ctg007_4334-6672' ' no hits & (original description: Putative , Description = , PFAM = PF07333)' T '35.2' 'not assigned.unknown' 'niben044scf00024057ctg001_38-1499' ' no hits & (original description: Putative , Description = Pre-rRNA-processing esf1-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00024076ctg005_1415-16405' '(at5g16210 : 1294.0) HEAT repeat-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), LisH dimerisation motif (InterPro:IPR006594), Armadillo-type fold (InterPro:IPR016024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35432 : 231.0) no description available & (reliability: 2588.0) & (original description: Putative BnaC02g06440D, Description = BnaC02g06440D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00024136ctg001_21442-22889' ' no hits & (original description: Putative SPSC, Description = Sucrose-phosphate synthase isoform C, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00024144ctg002_1073-3550' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00024144ctg007_11990-14588' ' no hits & (original description: Putative glysoja_007451, Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = PF13650)' T '35.2' 'not assigned.unknown' 'niben044scf00024228ctg003_1-5123' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00024262ctg003_14165-21566' '(at4g39790 : 450.0) Protein of unknown function (DUF630 and DUF632); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT2G27090.1); Has 571 Blast hits to 465 proteins in 32 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 6; Plants - 555; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68357 : 305.0) no description available & (reliability: 900.0) & (original description: Putative LOC100217082, Description = , PFAM = PF04782;PF04783)' T '35.2' 'not assigned.unknown' 'niben044scf00024266ctg003_28226-31379' ' no hits & (original description: Putative , Description = Tetratricopeptide repeat protein 37, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00024282ctg004_1-2989' ' no hits & (original description: Putative Dif54, Description = Extensin-like protein Dif54, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00024287ctg002_1-7611' '(at4g36210 : 537.0) Protein of unknown function (DUF726); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF726 (InterPro:IPR007941); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF726) (TAIR:AT2G18100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37596 : 464.0) no description available & (gnl|cdd|68835 : 210.0) no description available & (reliability: 1074.0) & (original description: Putative tmco4, Description = Transmembrane and coiled-coil domain-containing protein 4, PFAM = PF05277)' T '35.2' 'not assigned.unknown' 'niben044scf00024316ctg008_1-5211' '(at3g07760 : 215.0) Sterile alpha motif (SAM) domain-containing protein; CONTAINS InterPro DOMAIN/s: Sterile alpha motif (InterPro:IPR001660), Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 2 (InterPro:IPR011510); Has 60 Blast hits to 60 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 6; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 430.0) & (original description: Putative , Description = , PFAM = PF07647)' T '35.2' 'not assigned.unknown' 'niben044scf00024339ctg013_2968-6795' '(at3g02500 : 177.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16030.1); Has 49 Blast hits to 49 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative At3g02500, Description = BnaA03g05810D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00024339ctg013_11279-17597' '(at5g38690 : 283.0) Zinc-finger domain of monoamine-oxidase A repressor R1 protein; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), DDT domain, subgroup (InterPro:IPR018500), Cell division cycle-associated protein (InterPro:IPR018866); BEST Arabidopsis thaliana protein match is: Zinc-finger domain of monoamine-oxidase A repressor R1 protein (TAIR:AT1G67270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 566.0) & (original description: Putative cdca7, Description = Cell division cycle-associated 7-like protein, PFAM = PF10497;PF15612)' T '35.2' 'not assigned.unknown' 'niben044scf00024380ctg003_16007-23212' '(at3g29010 : 258.0) Biotin/lipoate A/B protein ligase family; FUNCTIONS IN: catalytic activity; INVOLVED IN: protein modification process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Biotin/lipoate A/B protein ligase (InterPro:IPR004143); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38369 : 128.0) no description available & (gnl|cdd|30444 : 91.2) no description available & (reliability: 516.0) & (original description: Putative lplA, Description = Putative lipoate-protein ligase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00024382ctg003_20003-21887' ' no hits & (original description: Putative , Description = , PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben044scf00024406ctg001_15749-19714' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00024416ctg006_829-2142' ' no hits & (original description: Putative , Description = , PFAM = PF13976)' T '35.2' 'not assigned.unknown' 'niben044scf00024421ctg005_934-7236' '(at4g17240 : 152.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages. & (reliability: 304.0) & (original description: Putative dl4655c, Description = Putative uncharacterized protein AT4g17240, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00024490ctg007_1-1442' ' no hits & (original description: Putative PGSC0003DMG400012289, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00024496ctg004_5538-9945' '(at1g22970 : 145.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71150.1); Has 134 Blast hits to 132 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 66; Fungi - 10; Plants - 48; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative At1g22970, Description = At1g22970/F19G10_8, PFAM = PF13324)' T '35.2' 'not assigned.unknown' 'niben044scf00024537ctg001_1-946' ' no hits & (original description: Putative YphC, Description = Plastid GTPase Der, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00024586ctg005_1764-5540' '(at2g34070 : 189.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 37 (TBL37); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 38 (TAIR:AT1G29050.1); Has 1344 Blast hits to 1324 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1342; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative gal2, Description = Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben044scf00024651ctg003_4200-8516' '(at1g72490 : 182.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17400.1); Has 75 Blast hits to 75 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 4; Plants - 58; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative BnaC05g13550D, Description = BnaC05g13550D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00024656ctg014_5896-11696' '(at1g70750 : 229.0) Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT5G16720.1); Has 8718 Blast hits to 6591 proteins in 581 species: Archae - 113; Bacteria - 587; Metazoa - 3699; Fungi - 664; Plants - 753; Viruses - 66; Other Eukaryotes - 2836 (source: NCBI BLink). & (gnl|cdd|68159 : 115.0) no description available & (reliability: 458.0) & (original description: Putative Os03g0708700, Description = Os03g0708700 protein, PFAM = PF04576)' T '35.2' 'not assigned.unknown' 'niben044scf00024701ctg012_11717-15571' '(at1g27530 : 333.0) CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-fold modifier-conjugating enzyme 1 (InterPro:IPR014806); Has 269 Blast hits to 269 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|38567 : 295.0) no description available & (gnl|cdd|87601 : 280.0) no description available & (reliability: 666.0) & (original description: Putative ufc1, Description = Ubiquitin-fold modifier-conjugating enzyme 1, PFAM = PF08694)' T '35.2' 'not assigned.unknown' 'niben044scf00024703ctg005_8-3444' '(at5g22090 : 139.0) Protein of unknown function (DUF3049); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) (TAIR:AT4G02810.1). & (reliability: 278.0) & (original description: Putative glysoja_032408, Description = Protein FAF-like, chloroplastic, PFAM = PF11250)' T '35.2' 'not assigned.unknown' 'niben044scf00024707ctg001_1-7641' '(at2g25800 : 1343.0) CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT2G20010.2); Has 317 Blast hits to 232 proteins in 40 species: Archae - 0; Bacteria - 8; Metazoa - 29; Fungi - 20; Plants - 175; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|69201 : 505.0) no description available & (reliability: 2686.0) & (original description: Putative Sb02g022610, Description = Putative uncharacterized protein Sb02g022610, PFAM = PF05664)' T '35.2' 'not assigned.unknown' 'niben044scf00024711ctg008_1-3763' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00024711ctg009_11544-27704' '(at5g22040 : 146.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown. & (reliability: 292.0) & (original description: Putative At5g22040, Description = At5g22040, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00024730ctg009_1-5164' '(at4g18230 : 110.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharide biosynthesis protein Alg14 like (InterPro:IPR013969); Has 640 Blast hits to 640 proteins in 277 species: Archae - 4; Bacteria - 281; Metazoa - 94; Fungi - 127; Plants - 57; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|38549 : 86.1) no description available & (reliability: 220.0) & (original description: Putative AT4G18230, Description = UDP-N-acetylglucosamine transferase subunit ALG14, PFAM = PF08660)' T '35.2' 'not assigned.unknown' 'niben044scf00024730ctg014_1-5093' '(at1g26470 : 131.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, H4/H2A histone acetyltransferase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CT20 (InterPro:IPR012423); Has 60 Blast hits to 60 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 2; Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative Os05g0512500, Description = Os05g0512500 protein, PFAM = PF07904)' T '35.2' 'not assigned.unknown' 'niben044scf00024851ctg021_10626-15920' '(at5g64460 : 262.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G58280.1). & (gnl|cdd|39951 : 194.0) no description available & (reliability: 524.0) & (original description: Putative F5J6, Description = Phosphoglycerate mutase-like protein, PFAM = PF00300)' T '35.2' 'not assigned.unknown' 'niben044scf00024851ctg026_1-5792' '(at5g17070 : 119.0) CONTAINS InterPro DOMAIN/s: Protein phosphatase 4 core regulatory subunit R2 (InterPro:IPR015267); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative TIDP3766, Description = BnaC02g07010D protein, PFAM = PF09184)' T '35.2' 'not assigned.unknown' 'niben044scf00024854ctg005_1-2628' ' no hits & (original description: Putative PGSC0003DMG400019409, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00024864ctg004_1-1659' ' (original description: Putative ycf1, Description = Hypothetical chloroplast RF19, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00024865ctg000_1-729' ' no hits & (original description: Putative Sb01g029366, Description = Retrotransposon protein, putative, Ty1-copia subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00024877ctg003_2750-22059' '(at5g47690 : 1453.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: cotyledon, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G77600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36738 : 521.0) no description available & (reliability: 2906.0) & (original description: Putative At5g47690, Description = Uncharacterized binding protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00024896ctg012_4433-9747' '(at4g29520 : 300.0) LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Saposin B (InterPro:IPR008139); Has 137 Blast hits to 137 proteins in 50 species: Archae - 2; Bacteria - 0; Metazoa - 41; Fungi - 10; Plants - 36; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 600.0) & (original description: Putative BnaA08g13380D, Description = BnaA08g13380D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00024939ctg006_501-2229' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben044scf00024943ctg000_1-1700' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00024946ctg013_664-3043' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00024954ctg004_2818-7917' '(at1g75980 : 250.0) Single hybrid motif superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: glycine catabolic process; LOCATED IN: mitochondrion, glycine cleavage complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Single hybrid motif (InterPro:IPR011053), Glycine cleavage H-protein (InterPro:IPR002930); Has 205 Blast hits to 205 proteins in 102 species: Archae - 6; Bacteria - 8; Metazoa - 118; Fungi - 2; Plants - 34; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|38476 : 192.0) no description available & (reliability: 500.0) & (original description: Putative , Description = T4O12.20, PFAM = PF01597)' T '35.2' 'not assigned.unknown' 'niben044scf00025044ctg012_50417-51587' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00025048ctg004_1-1341' '(at2g25737 : 98.6) Sulfite exporter TauE/SafE family protein; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF81 (InterPro:IPR002781); BEST Arabidopsis thaliana protein match is: Sulfite exporter TauE/SafE family protein (TAIR:AT2G36630.1); Has 3417 Blast hits to 2961 proteins in 724 species: Archae - 129; Bacteria - 1927; Metazoa - 0; Fungi - 0; Plants - 198; Viruses - 0; Other Eukaryotes - 1163 (source: NCBI BLink). & (reliability: 197.2) & (original description: Putative At2g25740, Description = Sulfite exporter TauE/SafE family protein, PFAM = PF01925)' T '35.2' 'not assigned.unknown' 'niben044scf00025074ctg001_5531-9100' '(at3g60410 : 89.7) Protein of unknown function (DUF1639); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1639 (InterPro:IPR012438); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1639) (TAIR:AT1G25370.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 179.4) & (original description: Putative , Description = , PFAM = PF07797)' T '35.2' 'not assigned.unknown' 'niben044scf00025134ctg000_1-1366' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00025206ctg014_2482-7794' '(at4g13370 : 531.0) Plant protein of unknown function (DUF936); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF936, plant (InterPro:IPR010341); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF936) (TAIR:AT3G14170.1); Has 492 Blast hits to 349 proteins in 79 species: Archae - 0; Bacteria - 30; Metazoa - 82; Fungi - 18; Plants - 260; Viruses - 6; Other Eukaryotes - 96 (source: NCBI BLink). & (gnl|cdd|69589 : 212.0) no description available & (reliability: 1062.0) & (original description: Putative At4g13370, Description = At4g13370, PFAM = PF06075)' T '35.2' 'not assigned.unknown' 'niben044scf00025207ctg005_1-2492' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben044scf00025246ctg010_1-3190' '(at5g57830 : 159.0) Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT4G30830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68159 : 102.0) no description available & (reliability: 318.0) & (original description: Putative MYOB7, Description = Zein-binding protein, PFAM = PF04576)' T '35.2' 'not assigned.unknown' 'niben044scf00025306ctg001_13597-16421' '(at1g23710 : 99.4) Protein of unknown function (DUF1645); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT1G70420.1); Has 288 Blast hits to 282 proteins in 52 species: Archae - 0; Bacteria - 6; Metazoa - 16; Fungi - 11; Plants - 191; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|71256 : 90.6) no description available & (reliability: 198.8) & (original description: Putative , Description = , PFAM = PF07816)' T '35.2' 'not assigned.unknown' 'niben044scf00025337ctg003_1984-6957' '(at4g21700 : 537.0) Protein of unknown function (DUF2921); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2921 (InterPro:IPR021319); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF2921) (TAIR:AT1G52780.1); Has 127 Blast hits to 111 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 127; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1074.0) & (original description: Putative PGSC0003DMG400029723, Description = DUF2921 family protein, PFAM = PF11145)' T '35.2' 'not assigned.unknown' 'niben044scf00025339ctg004_4337-6869' '(at4g38495 : 101.0) CONTAINS InterPro DOMAIN/s: YL1 nuclear, C-terminal (InterPro:IPR013272); Has 279 Blast hits to 279 proteins in 147 species: Archae - 0; Bacteria - 0; Metazoa - 94; Fungi - 133; Plants - 35; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative PHYPADRAFT_19485, Description = Predicted protein, PFAM = PF08265)' T '35.2' 'not assigned.unknown' 'niben044scf00025398ctg004_8558-17226' '(at1g68650 : 289.0) Uncharacterized protein family (UPF0016); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0016 (InterPro:IPR001727); BEST Arabidopsis thaliana protein match is: Uncharacterized protein family (UPF0016) (TAIR:AT1G25520.1); Has 1855 Blast hits to 1773 proteins in 684 species: Archae - 37; Bacteria - 1050; Metazoa - 159; Fungi - 141; Plants - 212; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink). & (gnl|cdd|38092 : 264.0) no description available & (gnl|cdd|32302 : 137.0) no description available & (reliability: 578.0) & (original description: Putative tparl, Description = Transmembrane protein 165, PFAM = PF01169;PF01169)' T '35.2' 'not assigned.unknown' 'niben044scf00025454ctg002_1-5403' '(at1g67570 : 414.0) Protein of unknown function (DUF3537); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3537 (InterPro:IPR021924); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3537) (TAIR:AT3G20300.1); Has 140 Blast hits to 140 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 138; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 828.0) & (original description: Putative BnaC06g28600D, Description = BnaC06g28600D protein, PFAM = PF12056)' T '35.2' 'not assigned.unknown' 'niben044scf00025462ctg000_15081-21992' ' no hits & (original description: Putative Os02g0636500, Description = Putative ovule protein, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00025463ctg001_5451-8399' ' no hits & (original description: Putative At2g06320, Description = Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00025466ctg005_12409-15037' '(at4g25030 : 153.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G45410.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative At4g25030, Description = AT4G25030 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00025471ctg000_1-1681' ' no hits & (original description: Putative ADO1, Description = Putative LOV domain-containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00025531ctg007_1-5466' ' no hits & (original description: Putative MYBR14, Description = Putative Myb family transcription factor At1g14600 family, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00025534ctg013_10599-16017' '(at5g37480 : 99.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative PGSC0003DMG400028217, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00025544ctg011_1-2011' ' no hits & (original description: Putative , Description = FIP1, putative isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00025577ctg002_1-2634' '(at3g19190 : 144.0) Encodes autophagy-related 2 (ATG2).; AUTOPHAGY 2 (ATG2); CONTAINS InterPro DOMAIN/s: autophagy-related, C-terminal (InterPro:IPR015412); Has 828 Blast hits to 713 proteins in 221 species: Archae - 0; Bacteria - 44; Metazoa - 384; Fungi - 228; Plants - 88; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (gnl|cdd|38204 : 134.0) no description available & (gnl|cdd|72748 : 97.2) no description available & (reliability: 288.0) & (original description: Putative APG2, Description = Autophagy-related protein 2, PFAM = PF09333)' T '35.2' 'not assigned.unknown' 'niben044scf00025586ctg002_14331-16654' ' no hits & (original description: Putative PGSC0003DMG400013918, Description = Kri1-like, C-terminal, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00025596ctg002_6-7161' '(at1g69360 : 312.0) Plant protein of unknown function (DUF863); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF863, plant (InterPro:IPR008581); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G26620.1); Has 257 Blast hits to 226 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2; Plants - 245; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|69429 : 238.0) no description available & (reliability: 624.0) & (original description: Putative , Description = , PFAM = PF05904)' T '35.2' 'not assigned.unknown' 'niben044scf00025638ctg002_25551-28661' ' no hits & (original description: Putative , Description = Retrotransposon protein, putative, Ty3-gypsy subclass, expressed, PFAM = PF13963)' T '35.2' 'not assigned.unknown' 'niben044scf00025662ctg007_1-1549' ' no hits & (original description: Putative PGSC0003DMG400004656, Description = , PFAM = PF12796)' T '35.2' 'not assigned.unknown' 'niben044scf00025673ctg000_174-19012' '(at1g76850 : 1193.0) Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.; exocyst complex component sec5 (SEC5A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen germination, pollen tube growth; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Exocyst complex component SEC5 (TAIR:AT1G21170.1); Has 532 Blast hits to 503 proteins in 167 species: Archae - 0; Bacteria - 2; Metazoa - 234; Fungi - 147; Plants - 83; Viruses - 4; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|37558 : 643.0) no description available & (reliability: 2386.0) & (original description: Putative SEC5A, Description = Exocyst complex component SEC5A, PFAM = PF15469)' T '35.2' 'not assigned.unknown' 'niben044scf00025697ctg011_6762-11028' '(at2g40060 : 150.0) Clathrin light chain protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin light chain (InterPro:IPR000996); BEST Arabidopsis thaliana protein match is: Clathrin light chain protein (TAIR:AT3G51890.1); Has 548 Blast hits to 536 proteins in 149 species: Archae - 2; Bacteria - 80; Metazoa - 210; Fungi - 41; Plants - 105; Viruses - 2; Other Eukaryotes - 108 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative CLC2, Description = Clathrin light chain 2, PFAM = PF01086)' T '35.2' 'not assigned.unknown' 'niben044scf00025779ctg006_1-1417' ' no hits & (original description: Putative , Description = RNA binding family protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00025827ctg005_12648-19742' '(at5g17660 : 293.0) tRNA (guanine-N-7) methyltransferase; FUNCTIONS IN: tRNA (guanine-N7-)-methyltransferase activity; INVOLVED IN: tRNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA (guanine-N-7) methyltransferase (InterPro:IPR003358); BEST Arabidopsis thaliana protein match is: tRNA (guanine-N-7) methyltransferase (TAIR:AT5G24840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80529 : 124.0) no description available & (reliability: 586.0) & (original description: Putative trmB, Description = tRNA (guanine-N(7)-)-methyltransferase, PFAM = PF02390)' T '35.2' 'not assigned.unknown' 'niben044scf00025867ctg001_1182-10551' '(at4g18530 : 472.0) Protein of unknown function (DUF707); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT4G12840.2); Has 310 Blast hits to 308 proteins in 22 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 303; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68772 : 335.0) no description available & (reliability: 944.0) & (original description: Putative gpm621, Description = Lysine ketoglutarate reductase trans-splicing related 1, PFAM = PF05212)' T '35.2' 'not assigned.unknown' 'niben044scf00025956ctg013_1143-3354' ' no hits & (original description: Putative SDM1_19t00011, Description = Putative reverse transcriptase, identical, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00025959ctg012_39926-42239' '(at4g15840 : 104.0) BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); Has 3394 Blast hits to 3343 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 3006; Fungi - 79; Plants - 135; Viruses - 80; Other Eukaryotes - 94 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative At4g15840, Description = Os01g0932600 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00025960ctg003_3845-9408' ' no hits & (original description: Putative PGSC0003DMG400028277, Description = Flug, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00025999ctg012_13490-15060' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00026063ctg001_960-5166' '(at1g51630 : 499.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G21190.1); Has 751 Blast hits to 749 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 751; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 131.0) no description available & (reliability: 998.0) & (original description: Putative At1g51630, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T '35.2' 'not assigned.unknown' 'niben044scf00026094ctg001_1-5373' '(at5g44010 : 122.0) unknown protein; Has 28 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative , Description = , PFAM = PF11107)' T '35.2' 'not assigned.unknown' 'niben044scf00026127ctg015_892-4672' ' no hits & (original description: Putative PGSC0003DMG400002784, Description = AP2/B3-like transcriptional factor family protein, putative, PFAM = PF02362)' T '35.2' 'not assigned.unknown' 'niben044scf00026127ctg015_4389-7046' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00026134ctg000_13722-18726' '(at1g20460 : 100.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76185.1); Has 37 Blast hits to 37 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative BnaA06g14410D, Description = BnaA06g14410D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00026157ctg004_1-2595' '(at2g25737 : 164.0) Sulfite exporter TauE/SafE family protein; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF81 (InterPro:IPR002781); BEST Arabidopsis thaliana protein match is: Sulfite exporter TauE/SafE family protein (TAIR:AT2G36630.1); Has 3417 Blast hits to 2961 proteins in 724 species: Archae - 129; Bacteria - 1927; Metazoa - 0; Fungi - 0; Plants - 198; Viruses - 0; Other Eukaryotes - 1163 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative At2g36630, Description = Putative ovule protein, PFAM = PF01925)' T '35.2' 'not assigned.unknown' 'niben044scf00026157ctg008_1-1677' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00026208ctg011_129-6229' '(at1g17665 : 239.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; Has 149 Blast hits to 146 proteins in 39 species: Archae - 0; Bacteria - 4; Metazoa - 21; Fungi - 5; Plants - 30; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). & (reliability: 478.0) & (original description: Putative F11A6.1, Description = F11A6.1 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00026212ctg003_1-2193' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00026280ctg002_2995-3932' ' no hits & (original description: Putative PGSC0003DMG400019730, Description = Putative ovule protein, PFAM = PF13947)' T '35.2' 'not assigned.unknown' 'niben044scf00026369ctg001_4431-7627' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00026396ctg008_1-2386' '(at1g64430 : 101.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative At1g64430, Description = BnaA09g12260D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00026407ctg001_1964-3861' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00026473ctg000_13281-16572' '(at1g76850 : 367.0) Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.; exocyst complex component sec5 (SEC5A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen germination, pollen tube growth; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Exocyst complex component SEC5 (TAIR:AT1G21170.1); Has 532 Blast hits to 503 proteins in 167 species: Archae - 0; Bacteria - 2; Metazoa - 234; Fungi - 147; Plants - 83; Viruses - 4; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|37558 : 152.0) no description available & (reliability: 734.0) & (original description: Putative SEC5A, Description = Exocyst complex component SEC5B, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00026473ctg001_1-1770' '(at1g21170 : 130.0) SEC5B; BEST Arabidopsis thaliana protein match is: exocyst complex component sec5 (TAIR:AT1G76850.1); Has 822 Blast hits to 808 proteins in 207 species: Archae - 0; Bacteria - 24; Metazoa - 388; Fungi - 169; Plants - 124; Viruses - 8; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative SEC5A, Description = Exocyst complex component 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00026473ctg002_340-14037' '(at1g76850 : 692.0) Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.; exocyst complex component sec5 (SEC5A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen germination, pollen tube growth; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Exocyst complex component SEC5 (TAIR:AT1G21170.1); Has 532 Blast hits to 503 proteins in 167 species: Archae - 0; Bacteria - 2; Metazoa - 234; Fungi - 147; Plants - 83; Viruses - 4; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|37558 : 445.0) no description available & (reliability: 1384.0) & (original description: Putative BnaA02g17740D, Description = BnaA02g17740D protein, PFAM = PF15469)' T '35.2' 'not assigned.unknown' 'niben044scf00026473ctg007_80-2517' ' no hits & (original description: Putative SEC5A, Description = AtSec5a, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00026557ctg003_6517-11135' '(at2g20760 : 124.0) Clathrin light chain protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin light chain (InterPro:IPR000996); BEST Arabidopsis thaliana protein match is: Clathrin light chain protein (TAIR:AT2G40060.1); Has 1791 Blast hits to 1279 proteins in 282 species: Archae - 0; Bacteria - 563; Metazoa - 557; Fungi - 96; Plants - 161; Viruses - 0; Other Eukaryotes - 414 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative CLC1, Description = Clathrin light chain protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00026597ctg002_7481-13310' ' no hits & (original description: Putative CURT1A, Description = Calmodulin 2 family protein, PFAM = PF14159)' T '35.2' 'not assigned.unknown' 'niben044scf00026606ctg010_2243-5873' '(at5g60370 : 114.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Defects-in-morphology protein 1-like, mitochondrial (InterPro:IPR019190); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39957 : 95.2) no description available & (reliability: 228.0) & (original description: Putative At5g60370, Description = BnaA02g06410D protein, PFAM = PF09810)' T '35.2' 'not assigned.unknown' 'niben044scf00026613ctg011_10298-20932' ' no hits & (original description: Putative PGSC0003DMG400003059, Description = Putative ovule protein, PFAM = PF01429;PF01429)' T '35.2' 'not assigned.unknown' 'niben044scf00026628ctg001_1-5885' '(at1g59520 : 274.0) Encodes CW7.; CW7; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2045 (InterPro:IPR019141); Has 145 Blast hits to 144 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 91; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|37676 : 195.0) no description available & (reliability: 548.0) & (original description: Putative T4M14.9, Description = Putative uncharacterized protein T4M14.9, PFAM = PF09741)' T '35.2' 'not assigned.unknown' 'niben044scf00026669ctg007_1-2734' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00026726ctg005_2543-6312' ' (original description: Putative POLR2A, Description = Cell wall hydroxyproline-rich glycoprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00026772ctg013_1581-5518' ' no hits & (original description: Putative DGAT3, Description = Soluble acyl-CoA:diacylglycerol O-acyltransferase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00026832ctg007_1-4371' '(at5g17510 : 278.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 556.0) & (original description: Putative BnaA10g17220D, Description = BnaA10g17220D protein, PFAM = PF15249)' T '35.2' 'not assigned.unknown' 'niben044scf00026864ctg022_2414-12083' '(at3g51620 : 476.0) PAP/OAS1 substrate-binding domain superfamily; BEST Arabidopsis thaliana protein match is: nucleotidyltransferases (TAIR:AT3G61690.1); Has 386 Blast hits to 356 proteins in 104 species: Archae - 0; Bacteria - 4; Metazoa - 102; Fungi - 40; Plants - 181; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|37117 : 176.0) no description available & (reliability: 952.0) & (original description: Putative pco079591, Description = Nucleotidyltransferase domain containing protein, expressed, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00026866ctg021_688-5972' '(at1g63855 : 189.0) Putative methyltransferase family protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G27400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative At1g63855, Description = Putative methyltransferase family protein, PFAM = PF10294)' T '35.2' 'not assigned.unknown' 'niben044scf00026866ctg021_892-5902' '(at1g63855 : 189.0) Putative methyltransferase family protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G27400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative At1g63855, Description = Putative methyltransferase family protein, PFAM = PF10294)' T '35.2' 'not assigned.unknown' 'niben044scf00026918ctg016_6020-10791' '(at5g62550 : 124.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; Has 14949 Blast hits to 9947 proteins in 971 species: Archae - 43; Bacteria - 3248; Metazoa - 4424; Fungi - 1542; Plants - 562; Viruses - 55; Other Eukaryotes - 5075 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative TCM_013867, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00026937ctg001_3150-8593' '(at1g21370 : 436.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF218 (InterPro:IPR003848); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39733 : 293.0) no description available & (reliability: 872.0) & (original description: Putative SPAC57A10.07, Description = Uncharacterized protein C57A10.07, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00026974ctg000_2419-6512' '(at4g19140 : 134.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative PGSC0003DMG400030871, Description = At4g19140, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00026974ctg001_1-6420' '(at4g19140 : 92.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative At4g19140, Description = At4g19140, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00026987ctg000_3588-5926' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00026987ctg002_4405-8150' '(at3g53010 : 234.0) Domain of unknown function (DUF303) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF303, acetylesterase putative (InterPro:IPR005181); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF303) (TAIR:AT4G34215.2); Has 339 Blast hits to 339 proteins in 106 species: Archae - 2; Bacteria - 221; Metazoa - 0; Fungi - 1; Plants - 86; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative At4g34215, Description = Probable carbohydrate esterase At4g34215, PFAM = PF03629)' T '35.2' 'not assigned.unknown' 'niben044scf00026992ctg009_1-2034' '(gnl|cdd|68105 : 92.1) no description available & (at2g34340 : 89.4) Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT1G29640.1); Has 334 Blast hits to 334 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 334; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative , Description = , PFAM = PF04520)' T '35.2' 'not assigned.unknown' 'niben044scf00027047ctg014_6045-11795' '(gnl|cdd|68437 : 501.0) no description available & (at5g11420 : 500.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF642 (TAIR:AT5G25460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1000.0) & (original description: Putative Sb04g007160, Description = Putative uncharacterized protein Sb04g007160, PFAM = PF04862;PF04862)' T '35.2' 'not assigned.unknown' 'niben044scf00027061ctg007_68-4265' '(at3g06150 : 727.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19060.1); Has 61 Blast hits to 59 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1454.0) & (original description: Putative BnaA05g31120D, Description = BnaA05g31120D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00027079ctg010_10624-19187' '(at1g73930 : 855.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1630 (InterPro:IPR012860); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|71232 : 567.0) no description available & (gnl|cdd|37643 : 554.0) no description available & (reliability: 1710.0) & (original description: Putative Sb01g040520, Description = Putative uncharacterized protein Sb01g040520, PFAM = PF08616)' T '35.2' 'not assigned.unknown' 'niben044scf00027106ctg013_13502-18760' '(at4g09580 : 299.0) SNARE associated Golgi protein family; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT1G71940.1); Has 2802 Blast hits to 2802 proteins in 773 species: Archae - 6; Bacteria - 1625; Metazoa - 227; Fungi - 38; Plants - 230; Viruses - 0; Other Eukaryotes - 676 (source: NCBI BLink). & (gnl|cdd|38350 : 203.0) no description available & (reliability: 598.0) & (original description: Putative gtk16, Description = Gtk16 protein, PFAM = PF09335)' T '35.2' 'not assigned.unknown' 'niben044scf00027122ctg011_311-10208' '(at5g51180 : 483.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G25770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39573 : 291.0) no description available & (gnl|cdd|68625 : 225.0) no description available & (reliability: 966.0) & (original description: Putative Sb04g033050, Description = Putative uncharacterized protein Sb04g033050, PFAM = PF05057)' T '35.2' 'not assigned.unknown' 'niben044scf00027251ctg000_4749-7048' ' no hits & (original description: Putative orf112a, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00027267ctg005_6044-10833' '(at5g20610 : 718.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26160.1); Has 918 Blast hits to 759 proteins in 180 species: Archae - 6; Bacteria - 105; Metazoa - 264; Fungi - 89; Plants - 167; Viruses - 5; Other Eukaryotes - 282 (source: NCBI BLink). & (reliability: 1436.0) & (original description: Putative BnaC09g37250D, Description = BnaC09g37250D protein, PFAM = PF01476;PF10358)' T '35.2' 'not assigned.unknown' 'niben044scf00027284ctg000_1006-3522' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00027284ctg005_1-7672' '(at3g51610 : 325.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 53 Blast hits to 53 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 650.0) & (original description: Putative Sb09g005000, Description = Putative uncharacterized protein Sb09g005000, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00027314ctg000_120-5816' '(at1g68310 : 228.0) Encodes a protein that has been shown to specifically interact with a sequence motif, PIEPPPHH, in the cytoplasmic tail of a membrane protein that directs the protein from the ER to vacuoles where it is internalized.; FUNCTIONS IN: vacuolar sorting signal binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF59 (InterPro:IPR002744); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF59) (TAIR:AT3G50845.1); Has 563 Blast hits to 563 proteins in 217 species: Archae - 4; Bacteria - 0; Metazoa - 246; Fungi - 136; Plants - 85; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (gnl|cdd|38591 : 208.0) no description available & (gnl|cdd|34734 : 144.0) no description available & (reliability: 456.0) & (original description: Putative AE7, Description = Protein AE7, PFAM = PF01883)' T '35.2' 'not assigned.unknown' 'niben044scf00027317ctg008_7408-11682' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00027410ctg003_12876-18220' ' no hits & (original description: Putative si606014d11, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00027573ctg002_2405-5013' ' (original description: Putative MTR_4g123460, Description = PIF1-like helicase, PFAM = PF05970)' T '35.2' 'not assigned.unknown' 'niben044scf00027658ctg001_4641-5871' ' no hits & (original description: Putative At2g06320, Description = Retroelement pol polyprotein-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00027668ctg010_15134-18804' '(at2g01620 : 187.0) maternal effect embryo arrest 11 (MEE11); BEST Arabidopsis thaliana protein match is: Ribonuclease inhibitor (TAIR:AT3G26000.1); Has 234 Blast hits to 230 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 2; Plants - 81; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative MEE11, Description = F-box SKIP28-like protein, PFAM = PF00646)' T '35.2' 'not assigned.unknown' 'niben044scf00027684ctg003_1-1519' ' no hits & (original description: Putative PGSC0003DMG401000914, Description = Putative ovule protein, PFAM = PF00912)' T '35.2' 'not assigned.unknown' 'niben044scf00027687ctg000_23286-29894' '(at2g36630 : 472.0) Sulfite exporter TauE/SafE family protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF81 (InterPro:IPR002781); BEST Arabidopsis thaliana protein match is: Sulfite exporter TauE/SafE family protein (TAIR:AT2G25737.1); Has 1587 Blast hits to 1517 proteins in 484 species: Archae - 83; Bacteria - 808; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 496 (source: NCBI BLink). & (reliability: 944.0) & (original description: Putative BnaC04g08690D, Description = BnaC04g08690D protein, PFAM = PF01925;PF01925)' T '35.2' 'not assigned.unknown' 'niben044scf00027708ctg016_12168-15159' ' (original description: Putative CBP, Description = Citrate-binding protein, PFAM = PF08787)' T '35.2' 'not assigned.unknown' 'niben044scf00027751ctg005_5127-7903' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00027793ctg000_1-1346' ' no hits & (original description: Putative Os07g0417700, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben044scf00027828ctg006_1-2875' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00027889ctg005_5893-7525' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00027921ctg001_8104-9640' ' no hits & (original description: Putative C117, Description = Zinc phosphodiesterase ELAC 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00027977ctg009_21404-23727' ' (original description: Putative Tgt1ORF2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00027990ctg000_1741-6474' '(at5g25170 : 297.0) PPPDE putative thiol peptidase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT2G25190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35545 : 251.0) no description available & (gnl|cdd|69428 : 180.0) no description available & (reliability: 594.0) & (original description: Putative At5g25170, Description = At5g25170, PFAM = PF05903)' T '35.2' 'not assigned.unknown' 'niben044scf00028025ctg001_8821-18127' '(at5g55660 : 179.0) DEK domain-containing chromatin associated protein; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: DEK domain-containing chromatin associated protein (TAIR:AT4G26630.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37477 : 124.0) no description available & (reliability: 358.0) & (original description: Putative PGSC0003DMG400022282, Description = Protein DEK, PFAM = PF08766)' T '35.2' 'not assigned.unknown' 'niben044scf00028044ctg001_10598-13692' ' no hits & (original description: Putative rpL2, Description = Ribosomal protein L2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00028065ctg007_3484-6011' ' no hits & (original description: Putative PGSC0003DMG400003994, Description = , PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'niben044scf00028092ctg010_1576-6113' ' no hits & (original description: Putative pabf, Description = HMR1 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00028121ctg012_2193-5628' ' no hits & (original description: Putative TAF12, Description = Transcription initiation factor TFIID subunit 12, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00028138ctg007_1-2009' ' no hits & (original description: Putative At3g04500, Description = RNA-binding protein 42, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00028147ctg001_19397-21048' ' (original description: Putative RT, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00028158ctg001_4796-10526' '(at4g01150 : 164.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative CURT1A, Description = Protein CURVATURE THYLAKOID 1A, chloroplastic, PFAM = PF14159)' T '35.2' 'not assigned.unknown' 'niben044scf00028196ctg001_880-4156' '(at2g27900 : 254.0) CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38150 : 101.0) no description available & (reliability: 508.0) & (original description: Putative , Description = , PFAM = PF10474)' T '35.2' 'not assigned.unknown' 'niben044scf00028201ctg006_826-6506' '(at5g11730 : 529.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G25970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86287 : 453.0) no description available & (reliability: 1058.0) & (original description: Putative Sb01g009220, Description = Putative uncharacterized protein Sb01g009220, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben044scf00028244ctg003_9561-12520' ' no hits & (original description: Putative MSB1, Description = Dead Box protein Dhh1p, PFAM = PF02162;PF02162)' T '35.2' 'not assigned.unknown' 'niben044scf00028263ctg013_66758-69355' '(at5g66800 : 85.5) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative , Description = Putative membrane-associated kinase regulator 1-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00028291ctg000_8654-11265' ' (original description: Putative corC, Description = 14 kDa proline-rich protein DC2.15, PFAM = PF14547)' T '35.2' 'not assigned.unknown' 'niben044scf00028332ctg000_1263-9885' '(at5g62090 : 417.0) SEUSS-like 2 (SLK2); BEST Arabidopsis thaliana protein match is: SEUSS-like 1 (TAIR:AT4G25520.1); Has 38958 Blast hits to 16422 proteins in 905 species: Archae - 6; Bacteria - 1880; Metazoa - 14538; Fungi - 4050; Plants - 2632; Viruses - 363; Other Eukaryotes - 15489 (source: NCBI BLink). & (reliability: 834.0) & (original description: Putative SLK3, Description = Probable transcriptional regulator SLK3, PFAM = PF01803)' T '35.2' 'not assigned.unknown' 'niben044scf00028355ctg007_11252-20523' '(at2g18220 : 721.0) Noc2p family; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0120 (InterPro:IPR005343); BEST Arabidopsis thaliana protein match is: Noc2p family (TAIR:AT3G55510.1); Has 4709 Blast hits to 3397 proteins in 331 species: Archae - 4; Bacteria - 179; Metazoa - 1693; Fungi - 681; Plants - 249; Viruses - 70; Other Eukaryotes - 1833 (source: NCBI BLink). & (q8lnu5|noc2l_orysa : 580.0) Nucleolar complex protein 2 homolog (Protein NOC2 homolog) - Oryza sativa (Rice) & (gnl|cdd|37467 : 528.0) no description available & (gnl|cdd|67337 : 336.0) no description available & (reliability: 1442.0) & (original description: Putative At2g18220, Description = Nucleolar complex protein 2 homolog, PFAM = PF03715)' T '35.2' 'not assigned.unknown' 'niben044scf00028372ctg007_1-1780' '(atmg00660 : 145.0) hypothetical protein; unknown protein. & (reliability: 290.0) & (original description: Putative orf176, Description = Orf176 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00028391ctg009_11137-16909' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00028391ctg010_1-5465' '(at4g01290 : 187.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 1797 Blast hits to 1352 proteins in 216 species: Archae - 0; Bacteria - 202; Metazoa - 850; Fungi - 267; Plants - 109; Viruses - 0; Other Eukaryotes - 369 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative BnaA09g00070D, Description = BnaA09g00070D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00028563ctg000_905-5029' ' no hits & (original description: Putative PGSC0003DMG400000898, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00028587ctg000_17390-23355' '(at2g25310 : 181.0) FUNCTIONS IN: carbohydrate binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate-binding-like fold (InterPro:IPR013784), Protein of unknown function DUF2012 (InterPro:IPR019008); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF2012) (TAIR:AT4G32130.1); Has 307 Blast hits to 307 proteins in 138 species: Archae - 0; Bacteria - 14; Metazoa - 141; Fungi - 68; Plants - 50; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|87975 : 102.0) no description available & (gnl|cdd|38516 : 101.0) no description available & (reliability: 362.0) & (original description: Putative pco145885(696), Description = Putative uncharacterized protein At2g25310, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00028642ctg003_1-1241' ' no hits & (original description: Putative RT4, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00028687ctg001_6353-8623' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00028695ctg001_4064-6508' ' no hits & (original description: Putative EDS5, Description = Multidrug and toxic compound extrusion protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00028722ctg006_23825-26324' ' no hits & (original description: Putative , Description = , PFAM = PF14244)' T '35.2' 'not assigned.unknown' 'niben044scf00028738ctg000_3902-6643' '(at1g09157 : 226.0) Protein of unknown function (DUF679); LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF679 (InterPro:IPR007770); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF679) (TAIR:AT5G39650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68643 : 191.0) no description available & (reliability: 452.0) & (original description: Putative Sb10g008180, Description = Putative uncharacterized protein Sb10g008180, PFAM = PF05078)' T '35.2' 'not assigned.unknown' 'niben044scf00028845ctg012_1-3771' ' no hits & (original description: Putative pco061809, Description = Os06g0235300 protein, PFAM = PF16501)' T '35.2' 'not assigned.unknown' 'niben044scf00028851ctg002_1-1987' ' no hits & (original description: Putative orf147, Description = Retrovirus-related Pol polyprotein from transposon 17.6, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00028877ctg003_2848-10415' ' no hits & (original description: Putative PGSC0003DMG400004658, Description = Putative DNA ligase 1-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00028908ctg008_2783-5995' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00028926ctg003_962-7604' ' no hits & (original description: Putative At1g28395, Description = At1g28395, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00029006ctg009_1541-4052' ' (original description: Putative LgRT5, Description = Reverse transcriptases, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00029060ctg005_3930-9172' '(at2g37960 : 261.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54060.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 522.0) & (original description: Putative BnaC04g45580D, Description = BnaC04g45580D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00029078ctg014_5031-8332' ' no hits & (original description: Putative PGSC0003DMG400008693, Description = Putative WPP domain-interacting protein 2-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00029081ctg000_4609-7392' '(at5g57280 : 177.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, methyltransferase, Williams-Beuren syndrome (InterPro:IPR022238), Methyltransferase type 11 (InterPro:IPR013216); Has 984 Blast hits to 969 proteins in 433 species: Archae - 16; Bacteria - 445; Metazoa - 145; Fungi - 145; Plants - 54; Viruses - 0; Other Eukaryotes - 179 (source: NCBI BLink). & (gnl|cdd|36754 : 159.0) no description available & (reliability: 354.0) & (original description: Putative 18922, Description = Putative methyltransferase WBSCR22, PFAM = PF13649)' T '35.2' 'not assigned.unknown' 'niben044scf00029120ctg000_6712-12372' '(at3g16200 : 647.0) unknown protein; Has 97 Blast hits to 97 proteins in 15 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 1294.0) & (original description: Putative BnaA05g23490D, Description = BnaA05g23490D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00029185ctg000_1-8134' '(at5g19540 : 536.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1072.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00029208ctg002_6820-9494' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben044scf00029254ctg001_1-5135' '(at5g65810 : 384.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49720.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 768.0) & (original description: Putative At3g49720, Description = Uncharacterized protein At3g49720, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00029296ctg001_8593-16082' ' no hits & (original description: Putative PGSC0003DMG400008430, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00029297ctg005_2546-7090' ' no hits & (original description: Putative str246N, Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00029310ctg009_1-7434' '(at1g04200 : 528.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dymeclin (InterPro:IPR019142); Has 395 Blast hits to 389 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 262; Fungi - 21; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|37436 : 305.0) no description available & (reliability: 1056.0) & (original description: Putative dym, Description = Dymeclin, PFAM = PF09742)' T '35.2' 'not assigned.unknown' 'niben044scf00029311ctg000_1-631' ' no hits & (original description: Putative PGSC0003DMG401007600, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00029312ctg010_344-5393' '(at5g20580 : 189.0) BEST Arabidopsis thaliana protein match is: FRIGIDA interacting protein 1 (TAIR:AT2G06005.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative FIP1, Description = FRIGIDA interacting protein 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00029317ctg001_1-2952' ' no hits & (original description: Putative , Description = , PFAM = PF06200;PF09425)' T '35.2' 'not assigned.unknown' 'niben044scf00029454ctg005_3894-8066' '(at4g38760 : 137.0) Protein of unknown function (DUF3414); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3414 (InterPro:IPR021827); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10845.1); Has 113 Blast hits to 108 proteins in 52 species: Archae - 0; Bacteria - 2; Metazoa - 61; Fungi - 10; Plants - 37; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00029460ctg002_1-995' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00029501ctg003_1058-3628' ' no hits & (original description: Putative At3g21490, Description = At3g21490, PFAM = PF00403)' T '35.2' 'not assigned.unknown' 'niben044scf00029507ctg002_4989-12297' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00029517ctg005_2124-6144' ' (original description: Putative ap2, Description = Ethylene response factor, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'niben044scf00029557ctg021_1-1211' ' no hits & (original description: Putative str246N, Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00029567ctg012_1-10476' ' (original description: Putative PGSC0003DMG400000014, Description = Enoyl-CoA hydratase/isomerase, PFAM = PF16113)' T '35.2' 'not assigned.unknown' 'niben044scf00029569ctg003_16807-18649' ' (original description: Putative PGSC0003DMG400007640, Description = Cytochrome P450 750A1 family, PFAM = PF00067)' T '35.2' 'not assigned.unknown' 'niben044scf00029570ctg002_1-4104' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00029621ctg007_2136-4707' ' no hits & (original description: Putative , Description = Putative rho GTPase-activating protein REN1-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00029705ctg016_1-5228' '(at5g54440 : 265.0) Encodes a putative TRAPPII tethering factor required for cell plate assembly during cytokinesis.; CLUB (CLUB); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3758 (InterPro:IPR022233); Has 362 Blast hits to 266 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 146; Fungi - 118; Plants - 63; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|37142 : 123.0) no description available & (reliability: 530.0) & (original description: Putative CLUB, Description = TRAPP II-specific subunit 130 homolog, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00029754ctg003_184-5236' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00029760ctg004_3533-6138' '(at1g03730 : 136.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G03600.1); Has 50 Blast hits to 50 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative At1g03730, Description = At1g03730, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00029768ctg002_1-2282' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Retrovirus-related Pol polyprotein LINE-1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00029819ctg015_12-3844' ' no hits & (original description: Putative , Description = , PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben044scf00029820ctg000_508-3914' '(at5g12170 : 206.0) Encodes one of the CRT-Like transporters (CLT1/AT5G19380, CLT2/AT4G24460, CLT3/AT5G12170). Required for glutathione homeostasis and stress responses. Mutants lacking these transporters are heavy metal-sensitive, glutathione(GSH)-deficient, and hypersensitive to Phytophthora infection.; CRT (chloroquine-resistance transporter)-like transporter 3 (CLT3); BEST Arabidopsis thaliana protein match is: CRT (chloroquine-resistance transporter)-like transporter 1 (TAIR:AT5G19380.1); Has 215 Blast hits to 213 proteins in 59 species: Archae - 0; Bacteria - 14; Metazoa - 5; Fungi - 2; Plants - 81; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative CLT1, Description = CRT (Chloroquine-resistance transporter)-like transporter, putative, PFAM = PF08627)' T '35.2' 'not assigned.unknown' 'niben044scf00029820ctg002_362-2780' ' no hits & (original description: Putative CLT3, Description = CRT (Chloroquine-resistance transporter)-like transporter, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00029887ctg003_4694-9307' '(at4g00355 : 176.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G45980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative ATI2, Description = ATG8-interacting protein 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00029944ctg006_6220-11347' ' (original description: Putative TIM13, Description = Mitochondrial import inner membrane translocase subunit TIM13, PFAM = PF02953)' T '35.2' 'not assigned.unknown' 'niben044scf00029969ctg003_1253-4023' ' no hits & (original description: Putative , Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00030057ctg001_1-1274' ' no hits & (original description: Putative PGSC0003DMG400014690, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00030095ctg003_7408-14060' '(at1g26110 : 234.0) Encodes Decapping 5, required for mRNA decapping, P-body formation and translational repression during postembryonic development.; decapping 5 (DCP5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: negative regulation of translation, deadenylation-independent decapping of nuclear-transcribed mRNA, cytoplasmic mRNA processing body assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DFDF motif (InterPro:IPR019050), FFD/TFG box motif (InterPro:IPR019053); BEST Arabidopsis thaliana protein match is: decapping 5-like (TAIR:AT5G45330.1); Has 14874 Blast hits to 10327 proteins in 603 species: Archae - 12; Bacteria - 902; Metazoa - 6418; Fungi - 2978; Plants - 1226; Viruses - 261; Other Eukaryotes - 3077 (source: NCBI BLink). & (gnl|cdd|29723 : 135.0) no description available & (gnl|cdd|36290 : 130.0) no description available & (reliability: 468.0) & (original description: Putative sum2, Description = Protein LSM14 B, PFAM = PF12701)' T '35.2' 'not assigned.unknown' 'niben044scf00030111ctg000_1-2353' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00030119ctg003_8415-11193' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00030170ctg005_1-2075' ' no hits & (original description: Putative At3g52030, Description = BnaA03g57050D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00030175ctg008_1-9258' '(at5g24750 : 525.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G07020.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|32004 : 85.9) no description available & (reliability: 1050.0) & (original description: Putative BnaC02g41080D, Description = BnaC02g41080D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00030255ctg008_20130-23127' ' no hits & (original description: Putative ACE1, Description = BHLH transcription factor, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00030272ctg006_3508-5297' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00030309ctg002_7653-13580' '(at3g22990 : 549.0) Armadillo-repeat containing protein. Involved in leaf and flower development. Located in nucleus. Broadly expressed throughout vegetative and floral tissues.; LEAF AND FLOWER RELATED (LFR); FUNCTIONS IN: binding; INVOLVED IN: flower development, leaf development; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); Has 69 Blast hits to 69 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 37; Fungi - 2; Plants - 25; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 1098.0) & (original description: Putative LFR, Description = Armadillo repeat-containing protein LFR, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00030314ctg001_5298-8666' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00030315ctg000_1-2792' ' no hits & (original description: Putative PGSC0003DMG400007431, Description = , PFAM = PF00646)' T '35.2' 'not assigned.unknown' 'niben044scf00030410ctg001_7971-9964' ' (original description: Putative BnaA02g11320D, Description = HAT family dimerisation domain containing protein, PFAM = PF05699)' T '35.2' 'not assigned.unknown' 'niben044scf00030454ctg003_17728-20786' ' no hits & (original description: Putative At4g33140, Description = NLI interacting factor-like phosphatase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00030466ctg002_40781-47074' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00030477ctg001_1-1030' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = TIR-NBS-LRR type disease resistance protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00030478ctg007_23188-36666' '(at1g55535 : 264.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13420.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 528.0) & (original description: Putative At3g13420, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00030516ctg005_1-1815' '(at1g32120 : 176.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557), Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G51538.1); Has 16736 Blast hits to 9656 proteins in 576 species: Archae - 4; Bacteria - 1182; Metazoa - 7098; Fungi - 2631; Plants - 1178; Viruses - 174; Other Eukaryotes - 4469 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative At1g32120, Description = C globular stage, putative, PFAM = PF10536)' T '35.2' 'not assigned.unknown' 'niben044scf00030525ctg004_1-3711' ' no hits & (original description: Putative At1g42960, Description = Chloroplast inner membrane localized protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00030530ctg001_1-4579' '(at2g18410 : 308.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 616.0) & (original description: Putative ELP5, Description = Elongator complex protein 5, PFAM = PF10483)' T '35.2' 'not assigned.unknown' 'niben044scf00030546ctg015_42436-45702' ' (original description: Putative pig4, Description = Putative intracellular pathogenesis-related protein, PFAM = PF00407)' T '35.2' 'not assigned.unknown' 'niben044scf00030547ctg008_11397-13816' ' no hits & (original description: Putative PGSC0003DMG400008197, Description = Probable magnesium transporter, PFAM = PF12023)' T '35.2' 'not assigned.unknown' 'niben044scf00030693ctg020_1-2007' '(at4g17870 : 261.0) Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.; PYRABACTIN RESISTANCE 1 (PYR1); FUNCTIONS IN: abscisic acid binding; INVOLVED IN: abscisic acid mediated signaling pathway, regulation of protein phosphatase type 2c activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis thaliana protein match is: PYR1-like 1 (TAIR:AT5G46790.1); Has 389 Blast hits to 389 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 389; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 522.0) & (original description: Putative PYR1, Description = Abscisic acid receptor PYR1, PFAM = PF10604)' T '35.2' 'not assigned.unknown' 'niben044scf00030733ctg004_4585-7991' '(at3g57400 : 288.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52500.1); Has 38 Blast hits to 38 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 576.0) & (original description: Putative BnaC04g24230D, Description = BnaC04g24230D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00030796ctg000_4492-8207' ' no hits & (original description: Putative , Description = , PFAM = PF13952)' T '35.2' 'not assigned.unknown' 'niben044scf00030821ctg004_2157-6697' '(at5g57280 : 211.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, methyltransferase, Williams-Beuren syndrome (InterPro:IPR022238), Methyltransferase type 11 (InterPro:IPR013216); Has 984 Blast hits to 969 proteins in 433 species: Archae - 16; Bacteria - 445; Metazoa - 145; Fungi - 145; Plants - 54; Viruses - 0; Other Eukaryotes - 179 (source: NCBI BLink). & (gnl|cdd|36754 : 194.0) no description available & (reliability: 422.0) & (original description: Putative 18922, Description = Putative methyltransferase WBSCR22, PFAM = PF12589)' T '35.2' 'not assigned.unknown' 'niben044scf00030893ctg005_1006-6679' '(at1g31870 : 171.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2050, pre-mRNA-splicing factor (InterPro:IPR018609); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37865 : 112.0) no description available & (reliability: 342.0) & (original description: Putative PHYPADRAFT_57686, Description = Predicted protein, PFAM = PF09736)' T '35.2' 'not assigned.unknown' 'niben044scf00030989ctg008_1-1585' ' no hits & (original description: Putative PGSC0003DMG400007462, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00031042ctg002_3200-4784' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00031087ctg006_1393-4109' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00031108ctg002_21752-24609' ' no hits & (original description: Putative PGSC0003DMG400021845, Description = , PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'niben044scf00031203ctg000_3653-8332' '(at5g58220 : 283.0) Encodes a transthyretin-like S-allantoin synthase protein that catalyzes two steps in the allantoin biosynthesis pathway by acting as a hydroxyisourate hydrolase and a 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) decarboxylase. Two alternatively spliced versions of the transcript give rise to a longer peroxisomally-targeted protein (AT5G58220.1 (called TTL1-)) and a slightly shorter cytoplasmic protein (AT5G58220.3 (called TTL2-)). Both have roughly equivalent enzymatic activity in vitro, but, allantoin biosynthesis is believed to occur in the peroxisome suggesting that the cytosolic form may participate in a different process.; transthyretin-like protein (TTL); FUNCTIONS IN: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity, hydroxyisourate hydrolase activity; INVOLVED IN: regulation of cell growth by extracellular stimulus, brassinosteroid mediated signaling pathway, protein homotetramerization; LOCATED IN: cytosol, extrinsic to internal side of plasma membrane, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional hydroxyisourate hydrolase/2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase (InterPro:IPR017129), Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase (InterPro:IPR018020), Hydroxyisourate hydrolase (InterPro:IPR014306), Transthyretin/hydroxyisourate hydrolase (InterPro:IPR000895); Has 3236 Blast hits to 3236 proteins in 817 species: Archae - 6; Bacteria - 1906; Metazoa - 529; Fungi - 103; Plants - 58; Viruses - 0; Other Eukaryotes - 634 (source: NCBI BLink). & (gnl|cdd|38216 : 127.0) no description available & (gnl|cdd|84877 : 126.0) no description available & (reliability: 566.0) & (original description: Putative TTL, Description = Uric acid degradation bifunctional protein TTL, PFAM = PF00576;PF09349)' T '35.2' 'not assigned.unknown' 'niben044scf00031247ctg001_1-4874' '(at1g78810 : 95.9) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative glysoja_038102, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00031253ctg000_379-3967' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben044scf00031365ctg002_4597-8246' ' no hits & (original description: Putative PGSC0003DMG400006281, Description = Putative myb-like protein X-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00031365ctg003_580-4473' '(at4g15830 : 314.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G01450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38144 : 192.0) no description available & (reliability: 628.0) & (original description: Putative , Description = Heparan-alpha-glucosaminide N-acetyltransferase, PFAM = PF12348)' T '35.2' 'not assigned.unknown' 'niben044scf00031482ctg011_1-1753' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00031488ctg013_2323-5577' ' no hits & (original description: Putative , Description = , PFAM = PF00403)' T '35.2' 'not assigned.unknown' 'niben044scf00031571ctg010_1-1486' ' no hits & (original description: Putative , Description = , PFAM = PF00098)' T '35.2' 'not assigned.unknown' 'niben044scf00031571ctg011_12292-16663' '(at3g02645 : 159.0) Plant protein of unknown function (DUF247); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50150.1). & (gnl|cdd|66792 : 126.0) no description available & (reliability: 318.0) & (original description: Putative , Description = , PFAM = PF03140)' T '35.2' 'not assigned.unknown' 'niben044scf00031609ctg001_701-6648' '(at3g24630 : 112.0) unknown protein; Has 5348 Blast hits to 3182 proteins in 353 species: Archae - 0; Bacteria - 481; Metazoa - 1959; Fungi - 405; Plants - 180; Viruses - 10; Other Eukaryotes - 2313 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative PGSC0003DMG400015636, Description = , PFAM = PF14383;PF14309)' T '35.2' 'not assigned.unknown' 'niben044scf00031652ctg004_2178-4709' ' no hits & (original description: Putative At2g06320, Description = Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00031734ctg000_3478-5847' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00031734ctg002_3909-11320' '(at3g57280 : 146.0) Transmembrane proteins 14C; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0136, Transmembrane (InterPro:IPR005349); BEST Arabidopsis thaliana protein match is: Transmembrane proteins 14C (TAIR:AT3G20510.1); Has 169 Blast hits to 169 proteins in 36 species: Archae - 0; Bacteria - 2; Metazoa - 27; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative BnaA04g02480D, Description = BnaA04g02480D protein, PFAM = PF03647)' T '35.2' 'not assigned.unknown' 'niben044scf00031737ctg000_3400-5715' '(at5g50090 : 105.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative , Description = Serine/threonine-protein kinase TAO3, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben044scf00031781ctg003_2287-5192' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00031870ctg001_1-3534' '(at4g32915 : 87.4) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of translational fidelity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glu-tRNAGln amidotransferase, C subunit (InterPro:IPR003837); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative GATC, Description = Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial, PFAM = PF02686)' T '35.2' 'not assigned.unknown' 'niben044scf00031880ctg002_5036-11631' '(at5g03670 : 181.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36420.1); Has 700 Blast hits to 624 proteins in 104 species: Archae - 0; Bacteria - 18; Metazoa - 333; Fungi - 60; Plants - 73; Viruses - 24; Other Eukaryotes - 192 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative PGSC0003DMG400028260, Description = , PFAM = PF14309)' T '35.2' 'not assigned.unknown' 'niben044scf00031890ctg001_6538-7437' ' no hits & (original description: Putative rpmJ, Description = 50S ribosomal protein L36, PFAM = PF00444)' T '35.2' 'not assigned.unknown' 'niben044scf00031914ctg000_10930-18333' '(at2g35680 : 358.0) Phosphotyrosine protein phosphatases superfamily protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, protein tyrosine/serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: Phosphotyrosine protein phosphatases superfamily protein (TAIR:AT5G56610.1); Has 1976 Blast hits to 1976 proteins in 288 species: Archae - 41; Bacteria - 150; Metazoa - 1097; Fungi - 157; Plants - 204; Viruses - 23; Other Eukaryotes - 304 (source: NCBI BLink). & (gnl|cdd|36931 : 247.0) no description available & (gnl|cdd|84103 : 84.6) no description available & (reliability: 716.0) & (original description: Putative v1g106562, Description = Predicted protein, PFAM = PF00782)' T '35.2' 'not assigned.unknown' 'niben044scf00032025ctg010_4106-8056' '(at2g43990 : 120.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; Has 1419 Blast hits to 494 proteins in 144 species: Archae - 0; Bacteria - 300; Metazoa - 246; Fungi - 102; Plants - 31; Viruses - 2; Other Eukaryotes - 738 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00032027ctg001_708-3482' ' no hits & (original description: Putative , Description = , PFAM = PF14383)' T '35.2' 'not assigned.unknown' 'niben044scf00032031ctg007_2213-6427' '(at1g60060 : 415.0) Serine/threonine-protein kinase WNK (With No Lysine)-related; BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase WNK (With No Lysine)-related (TAIR:AT5G53900.2); Has 3565 Blast hits to 2565 proteins in 80 species: Archae - 0; Bacteria - 3; Metazoa - 15; Fungi - 88; Plants - 227; Viruses - 0; Other Eukaryotes - 3232 (source: NCBI BLink). & (reliability: 830.0) & (original description: Putative Os02g0742700, Description = Os02g0742700 protein, PFAM = PF14215)' T '35.2' 'not assigned.unknown' 'niben044scf00032075ctg004_7177-9680' ' (original description: Putative PGSC0003DMG400001539, Description = , PFAM = PF03087)' T '35.2' 'not assigned.unknown' 'niben044scf00032077ctg002_16374-30578' '(at3g17900 : 657.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 45 Blast hits to 44 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 39; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 1314.0) & (original description: Putative BnaC06g07210D, Description = BnaC06g07210D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00032091ctg002_8962-16053' '(at4g27500 : 323.0) interacts with H+-ATPase, and regulates its activity; proton pump interactor 1 (PPI1); FUNCTIONS IN: protein binding; INVOLVED IN: regulation of proton transport; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36690.1); Has 56187 Blast hits to 35171 proteins in 2461 species: Archae - 533; Bacteria - 11472; Metazoa - 20772; Fungi - 6196; Plants - 2564; Viruses - 257; Other Eukaryotes - 14393 (source: NCBI BLink). & (reliability: 646.0) & (original description: Putative PPI1, Description = Proton pump interactor, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00032185ctg007_1-12113' '(at4g16144 : 468.0) Encodes AMSH3, a deubiquitinating enzyme that hydrolyzes K48- and K63-linked ubiquitin chains in vitro. Required for intracellular trafficking and vacuole biogenesis.; associated molecule with the SH3 domain of STAM 3 (AMSH3); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: associated molecule with the SH3 domain of STAM 1 (TAIR:AT1G48790.1); Has 901 Blast hits to 707 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 373; Fungi - 228; Plants - 224; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|38091 : 265.0) no description available & (gnl|cdd|85425 : 80.8) no description available & (reliability: 936.0) & (original description: Putative amsh, Description = STAM-binding protein, PFAM = PF01398;PF08969)' T '35.2' 'not assigned.unknown' 'niben044scf00032215ctg001_1-3847' ' no hits & (original description: Putative pco104183, Description = ENTH/VHS/GAT family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00032215ctg002_1-2223' ' no hits & (original description: Putative At5g63640, Description = ENTH/VHS/GAT family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00032227ctg001_1639-7163' '(at1g50740 : 150.0) Transmembrane proteins 14C; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0136, Transmembrane (InterPro:IPR005349); BEST Arabidopsis thaliana protein match is: Transmembrane proteins 14C (TAIR:AT3G20510.1); Has 412 Blast hits to 412 proteins in 97 species: Archae - 0; Bacteria - 35; Metazoa - 172; Fungi - 4; Plants - 187; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|67275 : 98.1) no description available & (gnl|cdd|39468 : 96.5) no description available & (reliability: 300.0) & (original description: Putative FAX5, Description = Protein FATTY ACID EXPORT 5, PFAM = PF03647)' T '35.2' 'not assigned.unknown' 'niben044scf00032227ctg001_7164-15601' '(at4g27040 : 439.0) VPS22; CONTAINS InterPro DOMAIN/s: ESCRT-2 complex, Snf8 (InterPro:IPR016689), EAP30 (InterPro:IPR007286); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38551 : 304.0) no description available & (gnl|cdd|86563 : 208.0) no description available & (reliability: 878.0) & (original description: Putative lsn, Description = Vacuolar-sorting protein SNF8, PFAM = PF04157)' T '35.2' 'not assigned.unknown' 'niben044scf00032308ctg016_10464-13709' '(at3g54000 : 81.6) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00032332ctg004_1914-7369' ' no hits & (original description: Putative , Description = , PFAM = PF05627;PF05627)' T '35.2' 'not assigned.unknown' 'niben044scf00032364ctg004_85321-88128' ' no hits & (original description: Putative orf301, Description = CCAAT-binding transcription factor, PFAM = PF02045;PF02045)' T '35.2' 'not assigned.unknown' 'niben044scf00032454ctg000_6256-7860' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Putative reverse transcriptase family member, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00032463ctg005_14460-16969' ' no hits & (original description: Putative , Description = , PFAM = PF13966)' T '35.2' 'not assigned.unknown' 'niben044scf00032565ctg004_1-4623' '(at5g57280 : 317.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, methyltransferase, Williams-Beuren syndrome (InterPro:IPR022238), Methyltransferase type 11 (InterPro:IPR013216); Has 984 Blast hits to 969 proteins in 433 species: Archae - 16; Bacteria - 445; Metazoa - 145; Fungi - 145; Plants - 54; Viruses - 0; Other Eukaryotes - 179 (source: NCBI BLink). & (gnl|cdd|36754 : 281.0) no description available & (reliability: 634.0) & (original description: Putative 18922, Description = Putative methyltransferase WBSCR22, PFAM = PF08241)' T '35.2' 'not assigned.unknown' 'niben044scf00032591ctg013_2800-6427' ' no hits & (original description: Putative , Description = Glycerol kinase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00032591ctg023_1-6149' '(at3g25680 : 392.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: S-layer homology domain (InterPro:IPR001119); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23890.1); Has 2454 Blast hits to 2065 proteins in 355 species: Archae - 39; Bacteria - 284; Metazoa - 1081; Fungi - 166; Plants - 264; Viruses - 45; Other Eukaryotes - 575 (source: NCBI BLink). & (reliability: 784.0) & (original description: Putative PGSC0003DMG400000804, Description = Putative uncharacterized protein T5M7.13, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00032605ctg004_901-3233' ' no hits & (original description: Putative At3g13910, Description = Putative uncharacterized protein At3g13910, PFAM = PF12023)' T '35.2' 'not assigned.unknown' 'niben044scf00032682ctg000_1-2275' '(at5g59400 : 153.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PGR5-like B (TAIR:AT4G11960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative At5g59400, Description = BnaA10g12410D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00032760ctg007_1-5962' '(at3g07760 : 226.0) Sterile alpha motif (SAM) domain-containing protein; CONTAINS InterPro DOMAIN/s: Sterile alpha motif (InterPro:IPR001660), Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 2 (InterPro:IPR011510); Has 60 Blast hits to 60 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 6; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative , Description = , PFAM = PF07647)' T '35.2' 'not assigned.unknown' 'niben044scf00032813ctg003_15154-24130' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00032821ctg000_74028-79578' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00032853ctg003_358-3104' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00032853ctg012_1-3756' '(at1g64355 : 198.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3593 (InterPro:IPR021995); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative asl4507, Description = Asl4507 protein, PFAM = PF12159)' T '35.2' 'not assigned.unknown' 'niben044scf00032877ctg008_12092-14655' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00032957ctg001_3505-5527' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00032978ctg013_7179-9089' '(at3g43520 : 142.0) Transmembrane proteins 14C; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0136, Transmembrane (InterPro:IPR005349); BEST Arabidopsis thaliana protein match is: Transmembrane proteins 14C (TAIR:AT2G26240.1); Has 541 Blast hits to 527 proteins in 134 species: Archae - 4; Bacteria - 94; Metazoa - 236; Fungi - 13; Plants - 153; Viruses - 7; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|39468 : 84.6) no description available & (gnl|cdd|67275 : 84.2) no description available & (reliability: 284.0) & (original description: Putative FAX7, Description = Protein FATTY ACID EXPORT 7, PFAM = PF03647)' T '35.2' 'not assigned.unknown' 'niben044scf00033045ctg002_1-1070' ' no hits & (original description: Putative PGSC0003DMG400006509, Description = Putative ovule protein, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00033045ctg002_125-2896' ' (original description: Putative glysoja_044264, Description = Transposon TX1 putative 149 kDa protein, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00033058ctg000_1192-4114' '(at5g40940 : 112.0) putative fasciclin-like arabinogalactan protein 20 (FLA20); CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative PGSC0003DMG400030506, Description = Fasciclin-like arabinogalactan protein 20, PFAM = PF02469)' T '35.2' 'not assigned.unknown' 'niben044scf00033084ctg006_1673-4794' ' (original description: Putative bd1, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'niben044scf00033131ctg000_1-1416' ' no hits & (original description: Putative PGSC0003DMG400006509, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00033228ctg006_4167-7415' '(at3g61700 : 238.0) Plant protein 1589 of unknown function; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476); BEST Arabidopsis thaliana protein match is: Plant protein 1589 of unknown function (TAIR:AT2G46420.1); Has 265 Blast hits to 263 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 13; Fungi - 3; Plants - 223; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|88257 : 89.2) no description available & (reliability: 476.0) & (original description: Putative BnaA09g39420D, Description = Putative helicase with zinc finger domain, PFAM = PF09713)' T '35.2' 'not assigned.unknown' 'niben044scf00033284ctg007_2933-5791' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00033316ctg008_1-904' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00033354ctg000_1-3133' ' no hits & (original description: Putative PGSC0003DMG400023217, Description = Os07g0599700 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00033441ctg007_11853-16203' ' no hits & (original description: Putative PGSC0003DMG400016410, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00033458ctg009_3392-17966' '(at3g50380 : 739.0) INVOLVED IN: protein localization; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein (InterPro:IPR009543); Has 365 Blast hits to 355 proteins in 118 species: Archae - 0; Bacteria - 0; Metazoa - 156; Fungi - 111; Plants - 61; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|87123 : 92.7) no description available & (reliability: 1478.0) & (original description: Putative , Description = , PFAM = PF06650)' T '35.2' 'not assigned.unknown' 'niben044scf00033469ctg002_1614-7004' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00033489ctg004_1434-5040' '(at1g78810 : 101.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00033489ctg004_1612-5385' '(at1g78810 : 101.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00033521ctg003_9748-13327' '(at5g50290 : 358.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 300 Blast hits to 300 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 300; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 716.0) & (original description: Putative BnaA03g23400D, Description = BnaA03g23400D protein, PFAM = PF13947)' T '35.2' 'not assigned.unknown' 'niben044scf00033580ctg009_1376-7270' '(at2g31130 : 95.1) unknown protein; Has 116 Blast hits to 113 proteins in 44 species: Archae - 0; Bacteria - 3; Metazoa - 21; Fungi - 2; Plants - 40; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative PGSC0003DMG400020429, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00033627ctg002_313-3278' ' no hits & (original description: Putative bzip1, Description = Basic-leucine zipper, PFAM = PF00170)' T '35.2' 'not assigned.unknown' 'niben044scf00033693ctg002_3571-5253' ' no hits & (original description: Putative glysoja_030340, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00033758ctg003_1-3672' '(at2g20310 : 110.0) Encodes RPM1 Interacting Protein 13 (RIN13), a resistance protein interactor shown to positively enhance resistance function of RPM1.; RPM1 interacting protein 13 (RIN13); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28690.1); Has 124 Blast hits to 118 proteins in 30 species: Archae - 2; Bacteria - 0; Metazoa - 13; Fungi - 2; Plants - 98; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative RIN13, Description = 28 kDa ribonucleoprotein, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00033833ctg009_3847-6798' ' no hits & (original description: Putative MTR_8g012795, Description = Defensin-like protein, PFAM = PF00304)' T '35.2' 'not assigned.unknown' 'niben044scf00033846ctg004_1-4004' ' (original description: Putative atr, Description = Putative aminotransferase, class V family protein, PFAM = PF00266)' T '35.2' 'not assigned.unknown' 'niben044scf00033880ctg001_1-3051' '(at4g27020 : 384.0) unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 768.0) & (original description: Putative At4g27020, Description = At4g27020/F10M23_360, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00033943ctg006_8518-10916' ' no hits & (original description: Putative , Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00034008ctg016_1084-3979' '(at5g09995 : 181.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative At1g08530, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00034014ctg000_4012-7198' ' no hits & (original description: Putative PGSC0003DMG400027047, Description = CASP-like protein, PFAM = PF04535)' T '35.2' 'not assigned.unknown' 'niben044scf00034212ctg005_5187-9128' '(at5g43490 : 80.1) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative PGSC0003DMG400004658, Description = Putative DNA ligase 1-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00034336ctg007_7915-10730' '(at5g26770 : 199.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05830.1); Has 26484 Blast hits to 16065 proteins in 1382 species: Archae - 343; Bacteria - 2653; Metazoa - 15273; Fungi - 2108; Plants - 1148; Viruses - 36; Other Eukaryotes - 4923 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative At1g09470, Description = Plant IF-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00034337ctg001_1-5217' '(at1g30755 : 273.0) Protein of unknown function (DUF668); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700), Protein of unknown function DUF3475 (InterPro:IPR021864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT1G34320.1); Has 465 Blast hits to 399 proteins in 71 species: Archae - 2; Bacteria - 14; Metazoa - 66; Fungi - 16; Plants - 336; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (reliability: 546.0) & (original description: Putative At1g34320, Description = DUF668 family protein, PFAM = PF11961)' T '35.2' 'not assigned.unknown' 'niben044scf00034383ctg001_606-3140' ' no hits & (original description: Putative , Description = , PFAM = PF14299)' T '35.2' 'not assigned.unknown' 'niben044scf00034588ctg004_4318-7852' ' no hits & (original description: Putative At1g09645, Description = At1g09645, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00034592ctg002_1-5169' '(at3g03320 : 209.0) RNA-binding ASCH domain protein; CONTAINS InterPro DOMAIN/s: ProFAR isomerase-like (InterPro:IPR010759), ASCH domain (InterPro:IPR007374); BEST Arabidopsis thaliana protein match is: RNA-binding ASCH domain protein (TAIR:AT2G43465.1); Has 111 Blast hits to 111 proteins in 31 species: Archae - 41; Bacteria - 13; Metazoa - 2; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (gnl|cdd|33802 : 91.5) no description available & (reliability: 418.0) & (original description: Putative F383_34639, Description = Lysine-specific demethylase 5C, PFAM = PF04266)' T '35.2' 'not assigned.unknown' 'niben044scf00034639ctg005_10010-12600' ' no hits & (original description: Putative PGSC0003DMG400023605, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00034653ctg004_170-3336' ' no hits & (original description: Putative , Description = , PFAM = PF08268)' T '35.2' 'not assigned.unknown' 'niben044scf00034665ctg003_9307-16782' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00034694ctg000_2728-6995' '(at3g51100 : 121.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00034702ctg000_3333-6193' '(at3g15750 : 107.0) Essential protein Yae1, N-terminal; CONTAINS InterPro DOMAIN/s: Essential protein Yae1, N-terminal (InterPro:IPR019191); BEST Arabidopsis thaliana protein match is: Essential protein Yae1, N-terminal (TAIR:AT1G34570.1); Has 133 Blast hits to 133 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 50; Fungi - 20; Plants - 55; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative , Description = , PFAM = PF09811)' T '35.2' 'not assigned.unknown' 'niben044scf00034729ctg004_27203-31593' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00034779ctg009_1-3852' '(at1g12380 : 846.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62870.1); Has 173 Blast hits to 170 proteins in 34 species: Archae - 0; Bacteria - 4; Metazoa - 25; Fungi - 8; Plants - 123; Viruses - 7; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 1692.0) & (original description: Putative At1g12380, Description = F5O11.10, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00034790ctg001_3658-8284' ' (original description: Putative murB, Description = UDP-N-acetylenolpyruvoylglucosamine reductase, PFAM = PF02873;PF01565)' T '35.2' 'not assigned.unknown' 'niben044scf00034803ctg006_247-4828' '(at1g07060 : 105.0) unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative PGSC0003DMG400030457, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00034811ctg009_1-4894' ' no hits & (original description: Putative , Description = , PFAM = PF14368)' T '35.2' 'not assigned.unknown' 'niben044scf00035053ctg002_10132-12638' '(at4g25760 : 89.0) Encodes a member of the GDU (glutamine dumper) family proteins involved in amino acid export: At4g31730 (GDU1), At4g25760 (GDU2), At5g57685 (GDU3), At2g24762 (GDU4), At5g24920 (GDU5), At3g30725 (GDU6) and At5g38770 (GDU7).; glutamine dumper 2 (GDU2); BEST Arabidopsis thaliana protein match is: glutamine dumper 3 (TAIR:AT5G57685.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative GDU3, Description = Protein GLUTAMINE DUMPER 3, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00035068ctg004_7591-10155' ' (original description: Putative pol, Description = Reverse transcriptase, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00035112ctg001_4568-7181' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Putative RNA-directed DNA polymerase (Reverse transcriptase), PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00035152ctg011_19381-22804' '(at1g79060 : 186.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56020.1); Has 3399 Blast hits to 980 proteins in 195 species: Archae - 0; Bacteria - 839; Metazoa - 390; Fungi - 256; Plants - 154; Viruses - 9; Other Eukaryotes - 1751 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00035163ctg005_2929-20788' '(at1g79150 : 772.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding factor (InterPro:IPR005612), Armadillo-type fold (InterPro:IPR016024), Nucleolar complex-associated (InterPro:IPR011501); Has 3184 Blast hits to 2630 proteins in 361 species: Archae - 21; Bacteria - 280; Metazoa - 1055; Fungi - 428; Plants - 179; Viruses - 26; Other Eukaryotes - 1195 (source: NCBI BLink). & (gnl|cdd|37364 : 316.0) no description available & (gnl|cdd|34719 : 193.0) no description available & (reliability: 1544.0) & (original description: Putative Sb01g032360, Description = Putative uncharacterized protein Sb01g032360, PFAM = PF07540;PF03914)' T '35.2' 'not assigned.unknown' 'niben044scf00035185ctg001_612-5529' '(at5g60370 : 257.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Defects-in-morphology protein 1-like, mitochondrial (InterPro:IPR019190); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39957 : 149.0) no description available & (reliability: 514.0) & (original description: Putative At5g60370, Description = Putative ovule protein, PFAM = PF09810;PF09810;PF09810)' T '35.2' 'not assigned.unknown' 'niben044scf00035196ctg000_6704-9231' ' no hits & (original description: Putative TCM_030822, Description = LIM and calponin domains-containing protein 1, putative, PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben044scf00035352ctg004_3855-8330' '(at1g70780 : 156.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 143 Blast hits to 143 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative BnaC08g06180D, Description = BnaC08g06180D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00035386ctg000_1-3615' '(at4g27630 : 266.0) Encodes a GPCR-type G protein receptor with nine predicted transmembrane domains. The protein binds abscisic acid (ABA) and is predicted to function as an ABA receptor. It has GTP-binding and GTPase activity and binds to ABA more effectively in the presence of GDP. GTG2 binds to GPA1, the alpha subunit of the heterotrimeric G protein. GPA1 (in its GTP-bound state) affects the GTP binding and GTPase activity of GTG2 and may act to down-regulate GTG2 binding to ABA. GTG2 is widely expressed throughout the plant and appears to be involved in the regulation of several ABA-dependent responses including seed germination, plant development, and promotion of stomatal closure. GTG2 transcript levels do not appear to change in response to ABA or abiotic stresses.; GPCR-type G protein 2 (GTG2); CONTAINS InterPro DOMAIN/s: GPCR 89-related (InterPro:IPR015672), Protein of unknown function DUF3735 (InterPro:IPR022535); BEST Arabidopsis thaliana protein match is: GPCR-type G protein 1 (TAIR:AT1G64990.2). & (gnl|cdd|37628 : 226.0) no description available & (reliability: 532.0) & (original description: Putative gphr, Description = Golgi pH regulator, PFAM = PF12430)' T '35.2' 'not assigned.unknown' 'niben044scf00035386ctg001_1-6932' '(at4g27630 : 318.0) Encodes a GPCR-type G protein receptor with nine predicted transmembrane domains. The protein binds abscisic acid (ABA) and is predicted to function as an ABA receptor. It has GTP-binding and GTPase activity and binds to ABA more effectively in the presence of GDP. GTG2 binds to GPA1, the alpha subunit of the heterotrimeric G protein. GPA1 (in its GTP-bound state) affects the GTP binding and GTPase activity of GTG2 and may act to down-regulate GTG2 binding to ABA. GTG2 is widely expressed throughout the plant and appears to be involved in the regulation of several ABA-dependent responses including seed germination, plant development, and promotion of stomatal closure. GTG2 transcript levels do not appear to change in response to ABA or abiotic stresses.; GPCR-type G protein 2 (GTG2); CONTAINS InterPro DOMAIN/s: GPCR 89-related (InterPro:IPR015672), Protein of unknown function DUF3735 (InterPro:IPR022535); BEST Arabidopsis thaliana protein match is: GPCR-type G protein 1 (TAIR:AT1G64990.2). & (gnl|cdd|37628 : 303.0) no description available & (reliability: 636.0) & (original description: Putative BGTG1g25, Description = Putative GPCR-type G protein 1, PFAM = PF12537)' T '35.2' 'not assigned.unknown' 'niben044scf00035409ctg003_83-8615' '(at1g64960 : 942.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-type fold (InterPro:IPR016024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37160 : 591.0) no description available & (reliability: 1884.0) & (original description: Putative NCAPG2, Description = Condensin-2 complex subunit G2, PFAM = PF12422)' T '35.2' 'not assigned.unknown' 'niben044scf00035415ctg005_1-2648' ' no hits & (original description: Putative , Description = Putative carboxypeptidase D-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00035424ctg004_1215-3808' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00035489ctg004_1725-5382' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00035525ctg005_13319-19803' '(at4g12590 : 439.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF106, transmembrane (InterPro:IPR002809), Uncharacterised conserved protein UCP010045, transmembrane eukaryotic (InterPro:IPR008568); Has 409 Blast hits to 409 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 136; Plants - 53; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|38398 : 339.0) no description available & (gnl|cdd|86967 : 324.0) no description available & (reliability: 878.0) & (original description: Putative EMC3, Description = ER membrane protein complex subunit 3, PFAM = PF01956)' T '35.2' 'not assigned.unknown' 'niben044scf00035631ctg005_4105-8531' '(at5g37010 : 90.9) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G65710.1); Has 6746 Blast hits to 5259 proteins in 486 species: Archae - 7; Bacteria - 485; Metazoa - 3508; Fungi - 577; Plants - 378; Viruses - 50; Other Eukaryotes - 1741 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00035685ctg005_2797-4907' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00035685ctg005_4908-7206' ' no hits & (original description: Putative At1g13920, Description = F7A19.1 protein, PFAM = PF03763)' T '35.2' 'not assigned.unknown' 'niben044scf00035796ctg001_245-6092' ' no hits & (original description: Putative emb1303, Description = At1g56200/F14G9_26, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00035823ctg005_1-2188' '(at1g79260 : 152.0) CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1794 (InterPro:IPR014878); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87641 : 102.0) no description available & (reliability: 304.0) & (original description: Putative IDP748, Description = Putative uncharacterized protein Sb03g031180, PFAM = PF08768)' T '35.2' 'not assigned.unknown' 'niben044scf00035831ctg004_3277-6408' '(at5g39530 : 218.0) Protein of unknown function (DUF1997); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1997 (InterPro:IPR018971); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1997) (TAIR:AT5G39520.1); Has 204 Blast hits to 204 proteins in 68 species: Archae - 0; Bacteria - 103; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|87911 : 100.0) no description available & (reliability: 436.0) & (original description: Putative , Description = , PFAM = PF09366)' T '35.2' 'not assigned.unknown' 'niben044scf00035891ctg009_1-1697' '(at4g32480 : 214.0) Protein of unknown function (DUF506) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT2G20670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68298 : 178.0) no description available & (reliability: 428.0) & (original description: Putative At2g20670, Description = Expressed protein, PFAM = PF04720)' T '35.2' 'not assigned.unknown' 'niben044scf00035899ctg002_955-5492' ' no hits & (original description: Putative At5g39570, Description = Uncharacterized protein At5g39570, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00035954ctg001_53333-55887' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00035989ctg008_324-5337' '(at4g32910 : 346.0) CONTAINS InterPro DOMAIN/s: Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro:IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87313 : 184.0) no description available & (reliability: 692.0) & (original description: Putative NUP75, Description = Nuclear pore complex protein NUP75, PFAM = PF07575)' T '35.2' 'not assigned.unknown' 'niben044scf00036025ctg002_1-2105' ' no hits & (original description: Putative , Description = Putative transposon protein, PFAM = PF13960)' T '35.2' 'not assigned.unknown' 'niben044scf00036051ctg004_6148-10197' ' no hits & (original description: Putative ECP63, Description = LEA protein group 3, PFAM = PF02987;PF02987;PF02987;PF02987)' T '35.2' 'not assigned.unknown' 'niben044scf00036109ctg004_1-7012' '(at1g48110 : 207.0) evolutionarily conserved C-terminal region 7 (ECT7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 6 (TAIR:AT3G17330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37112 : 105.0) no description available & (reliability: 414.0) & (original description: Putative PGSC0003DMG400004607, Description = YTH domain family protein 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00036150ctg005_13725-17367' ' no hits & (original description: Putative IKU1, Description = AtVQ14, PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben044scf00036153ctg000_7485-17068' '(gnl|cdd|69613 : 758.0) no description available & (at2g44260 : 661.0) Plant protein of unknown function (DUF946); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF946 (InterPro:IPR009291); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF946) (TAIR:AT2G44230.1); Has 355 Blast hits to 329 proteins in 91 species: Archae - 0; Bacteria - 23; Metazoa - 15; Fungi - 113; Plants - 198; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 1322.0) & (original description: Putative Sb02g037340, Description = Putative uncharacterized protein Sb02g037340, PFAM = PF06101)' T '35.2' 'not assigned.unknown' 'niben044scf00036219ctg000_25106-26955' ' (original description: Putative , Description = Hydroxyproline-rich systemin A, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00036242ctg001_842-4781' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00036309ctg000_18702-27470' ' no hits & (original description: Putative PGSC0003DMG400003639, Description = WEB family plant protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00036591ctg002_6950-9365' ' no hits & (original description: Putative PGSC0003DMG400004676, Description = Pollen protein Ole E I-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00036591ctg004_298-2845' ' (original description: Putative PGSC0003DMG400000783, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00036611ctg002_5454-8644' ' no hits & (original description: Putative , Description = , PFAM = PF04570)' T '35.2' 'not assigned.unknown' 'niben044scf00036727ctg002_1-5400' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00036775ctg000_34527-36968' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00036938ctg004_4145-14263' '(at5g05310 : 524.0) TLC ATP/ADP transporter; Has 647 Blast hits to 643 proteins in 131 species: Archae - 0; Bacteria - 265; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (reliability: 1048.0) & (original description: Putative BnaC09g50020D, Description = BnaC09g50020D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00036939ctg010_1-6270' '(at5g53110 : 174.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G46495.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative ATL69, Description = Putative RING-H2 finger protein ATL69, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben044scf00036973ctg006_4238-8194' '(at2g47115 : 162.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative At1g10660, Description = AT1G10660 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00037001ctg005_1-3347' ' no hits & (original description: Putative Os12g0170300, Description = Bile acid sodium symporter/ transporter, PFAM = PF01758)' T '35.2' 'not assigned.unknown' 'niben044scf00037009ctg003_16975-19391' ' (original description: Putative LgRT8, Description = Reverse transcriptases, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00037116ctg005_3053-5758' ' no hits & (original description: Putative At5g63520, Description = F-box/LRR-repeat protein At5g63520, PFAM = PF00646)' T '35.2' 'not assigned.unknown' 'niben044scf00037137ctg004_3016-9012' '(at4g09680 : 461.0) Encodes CTC1 (Conserved Telomere Maintenance Component 1) involved in telomere maintenance.; conserved telomere maintenance component 1 (CTC1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: telomere maintenance; LOCATED IN: chromosome, telomeric region; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 922.0) & (original description: Putative PGSC0003DMG400031482, Description = CST complex subunit CTC1-like protein, PFAM = PF15491)' T '35.2' 'not assigned.unknown' 'niben044scf00037141ctg001_22168-27346' '(at1g10710 : 122.0) Computational predictions suggested the presence of a small cysteine-rich protein downstream of this gene model (Silverstein 2007), but subsequent analysis revealed that this region contains a tenth exon for the At1g10710 gene which is depicted in the At1g10710.1 gene model.; POOR HOMOLOGOUS SYNAPSIS 1 (PHS1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: zygotene, synapsis, leptotene; LOCATED IN: cytoplasm; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; Has 27 Blast hits to 26 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative PHS1, Description = Poor ous synapsis 1, putative isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00037155ctg007_1-3996' '(at4g37110 : 95.1) Zinc-finger domain of monoamine-oxidase A repressor R1; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Cell division cycle-associated protein (InterPro:IPR018866); BEST Arabidopsis thaliana protein match is: Zinc-finger domain of monoamine-oxidase A repressor R1 (TAIR:AT2G23530.1); Has 452 Blast hits to 447 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 137; Fungi - 54; Plants - 229; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative Sb01g010320, Description = Putative uncharacterized protein Sb01g010320, PFAM = PF10497)' T '35.2' 'not assigned.unknown' 'niben044scf00037159ctg014_20180-26926' '(at1g21280 : 83.2) CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative PGSC0003DMG400039723, Description = Putative ovule protein, PFAM = PF03732;PF14244)' T '35.2' 'not assigned.unknown' 'niben044scf00037243ctg013_1-482' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00037260ctg004_1446-3976' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00037269ctg000_1-5748' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00037338ctg009_2440-4888' ' no hits & (original description: Putative PGSC0003DMG400015603, Description = Chloroplast envelope protein 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00037339ctg007_2045-4562' ' no hits & (original description: Putative , Description = , PFAM = PF03732)' T '35.2' 'not assigned.unknown' 'niben044scf00037350ctg001_1-3299' ' (original description: Putative PI, Description = Trypsin proteinase inhibitor, PFAM = PF02428;PF02428;PF02428;PF02428;PF02428;PF02428;PF02428)' T '35.2' 'not assigned.unknown' 'niben044scf00037501ctg010_2031-5151' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00037513ctg003_1832-4268' ' no hits & (original description: Putative At2g44430, Description = DNA-binding bromodomain-containing protein, PFAM = PF00249)' T '35.2' 'not assigned.unknown' 'niben044scf00037544ctg003_403-11034' ' (original description: Putative PGSC0003DMG400012634, Description = , PFAM = PF03023)' T '35.2' 'not assigned.unknown' 'niben044scf00037592ctg000_9584-16745' '(at1g76620 : 345.0) Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT1G21060.1); Has 866 Blast hits to 747 proteins in 129 species: Archae - 0; Bacteria - 108; Metazoa - 79; Fungi - 87; Plants - 458; Viruses - 1; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|68359 : 182.0) no description available & (reliability: 690.0) & (original description: Putative At1g21060, Description = BnaA04g13840D protein, PFAM = PF14389;PF04784)' T '35.2' 'not assigned.unknown' 'niben044scf00037651ctg008_1-473' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00037660ctg017_100-3098' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00037680ctg002_1549-4168' ' no hits & (original description: Putative PGSC0003DMG400029110, Description = Microtubule-associated protein 65-8 isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00037736ctg004_2314-6834' '(at3g58110 : 303.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42370.1). & (reliability: 606.0) & (original description: Putative PGSC0003DMG400009404, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00037772ctg009_102-3874' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00037772ctg009_564-4275' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00037788ctg005_444-2920' '(at3g56160 : 149.0) Sodium Bile acid symporter family; FUNCTIONS IN: bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657); Has 3096 Blast hits to 3087 proteins in 1049 species: Archae - 42; Bacteria - 2090; Metazoa - 108; Fungi - 101; Plants - 149; Viruses - 0; Other Eukaryotes - 606 (source: NCBI BLink). & (gnl|cdd|40018 : 100.0) no description available & (reliability: 298.0) & (original description: Putative BASS4, Description = Bile acid-sodium symporter family protein 4, PFAM = PF13593)' T '35.2' 'not assigned.unknown' 'niben044scf00037811ctg014_1955-4416' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00037851ctg009_1-360' ' no hits & (original description: Putative , Description = Mutant gag-pol polyprotein, PFAM = PF03732)' T '35.2' 'not assigned.unknown' 'niben044scf00037875ctg000_2125-3703' '(at1g31175 : 83.6) unknown protein; Has 20 Blast hits to 20 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00037888ctg007_2966-9541' '(at1g11170 : 498.0) Protein of unknown function (DUF707); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G61240.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68772 : 315.0) no description available & (reliability: 996.0) & (original description: Putative At1g11170, Description = At1g11170/T28P6_16, PFAM = PF05212)' T '35.2' 'not assigned.unknown' 'niben044scf00038058ctg000_11597-13030' ' no hits & (original description: Putative , Description = DNA/RNA polymerases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00038088ctg004_137-9130' '(at1g17850 : 317.0) Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1). & (gnl|cdd|80545 : 173.0) no description available & (reliability: 634.0) & (original description: Putative STR8, Description = AtStr8, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00038152ctg001_1-2564' '(at5g48470 : 231.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative PGSC0003DMG400013943, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00038212ctg000_4270-6761' ' no hits & (original description: Putative PGSC0003DMG400001539, Description = , PFAM = PF03087)' T '35.2' 'not assigned.unknown' 'niben044scf00038250ctg003_33535-36154' ' (original description: Putative D19H, Description = Late embryogenesis abundant protein B19.1A, PFAM = PF00477)' T '35.2' 'not assigned.unknown' 'niben044scf00038422ctg006_10572-15247' '(at3g11590 : 322.0) unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22310.1); Has 22320 Blast hits to 15179 proteins in 1213 species: Archae - 372; Bacteria - 2307; Metazoa - 10906; Fungi - 1700; Plants - 1146; Viruses - 65; Other Eukaryotes - 5824 (source: NCBI BLink). & (reliability: 644.0) & (original description: Putative At1g50660, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00038423ctg002_6327-9244' '(at1g23710 : 118.0) Protein of unknown function (DUF1645); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT1G70420.1); Has 288 Blast hits to 282 proteins in 52 species: Archae - 0; Bacteria - 6; Metazoa - 16; Fungi - 11; Plants - 191; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|71256 : 89.0) no description available & (reliability: 236.0) & (original description: Putative , Description = , PFAM = PF07816)' T '35.2' 'not assigned.unknown' 'niben044scf00038482ctg000_12351-14744' ' no hits & (original description: Putative PGSC0003DMG400006901, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00038512ctg001_6054-10203' '(at5g19300 : 183.0) CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Protein of unknown function DUF171 (InterPro:IPR003750); Has 3649 Blast hits to 1964 proteins in 291 species: Archae - 113; Bacteria - 121; Metazoa - 1082; Fungi - 399; Plants - 227; Viruses - 4; Other Eukaryotes - 1703 (source: NCBI BLink). & (gnl|cdd|39128 : 158.0) no description available & (gnl|cdd|86046 : 156.0) no description available & (reliability: 366.0) & (original description: Putative CI114, Description = Uncharacterized protein C9orf114, PFAM = PF02598)' T '35.2' 'not assigned.unknown' 'niben044scf00038541ctg000_444-5331' '(at1g76250 : 508.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 74 Blast hits to 74 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 1016.0) & (original description: Putative BnaA07g21460D, Description = BnaA07g21460D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00038557ctg004_5604-9181' '(at2g46300 : 103.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01110.1); Has 504 Blast hits to 503 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 501; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 81.5) no description available & (reliability: 206.0) & (original description: Putative PGSC0003DMG400019400, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00038597ctg002_1224-3784' '(at1g06980 : 149.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 159 Blast hits to 159 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative Sb09g004920, Description = Putative uncharacterized protein Sb09g004920, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben044scf00038629ctg007_741-5645' '(at3g01680 : 261.0) CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 522.0) & (original description: Putative , Description = , PFAM = PF14577;PF14576)' T '35.2' 'not assigned.unknown' 'niben044scf00038716ctg000_1-1051' ' no hits & (original description: Putative , Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben044scf00038726ctg000_41-2697' ' no hits & (original description: Putative , Description = , PFAM = PF01693)' T '35.2' 'not assigned.unknown' 'niben044scf00038831ctg006_2534-8369' '(at1g10522 : 90.1) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative At1g10522, Description = At1g10522, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00038849ctg002_2065-4808' '(at5g64010 : 180.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 34 Blast hits to 34 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative PGSC0003DMG400012541, Description = U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1, putative isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00038858ctg013_10290-12101' '(at2g32380 : 114.0) Transmembrane protein 97, predicted; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane protein 97, predicted (InterPro:IPR016964); BEST Arabidopsis thaliana protein match is: Transmembrane protein 97, predicted (TAIR:AT1G05210.1); Has 585 Blast hits to 585 proteins in 19 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 558; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative BnaC08g46350D, Description = BnaC08g46350D protein, PFAM = PF10914)' T '35.2' 'not assigned.unknown' 'niben044scf00038889ctg005_1-1081' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00038976ctg003_911-4247' ' (original description: Putative KK1_023597, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF07727)' T '35.2' 'not assigned.unknown' 'niben044scf00038989ctg000_1-3976' '(at1g36320 : 336.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37920.1); Has 93 Blast hits to 90 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 672.0) & (original description: Putative At1g36320, Description = Plant/F7F23-4 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00038998ctg004_127-3100' '(at4g27745 : 189.0) Yippee family putative zinc-binding protein; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: Yippee family putative zinc-binding protein (TAIR:AT5G53940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66871 : 150.0) no description available & (gnl|cdd|38609 : 145.0) no description available & (q8s5m8|yipl_orysa : 122.0) Putative yippee-like protein Os10g0369500 - Oryza sativa (Rice) & (reliability: 378.0) & (original description: Putative ypel, Description = Protein yippee-like, PFAM = PF03226)' T '35.2' 'not assigned.unknown' 'niben044scf00039049ctg004_1212-3707' ' no hits & (original description: Putative pol, Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben044scf00039050ctg011_1-9205' '(at1g26330 : 187.0) DNA binding; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), FY-rich, C-terminal (InterPro:IPR003889), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943). & (reliability: 374.0) & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00039162ctg001_7665-10798' '(at4g20010 : 240.0) plastid transcriptionally active 9 (PTAC9); FUNCTIONS IN: single-stranded DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plastid chromosome, nucleoid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Primosome PriB/single-strand DNA-binding (InterPro:IPR000424); BEST Arabidopsis thaliana protein match is: organellar single-stranded DNA binding protein 3 (TAIR:AT5G44785.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 480.0) & (original description: Putative PTAC9, Description = Plastid transcriptionally active 9, putative, PFAM = PF00436)' T '35.2' 'not assigned.unknown' 'niben044scf00039175ctg001_1682-6889' '(at5g19160 : 444.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 11 (TBL11); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT3G06080.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|72785 : 84.3) no description available & (reliability: 888.0) & (original description: Putative TBL10, Description = PC-Esterase, PFAM = PF13839;PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben044scf00039201ctg002_3269-9799' '(at5g11500 : 238.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF814 (InterPro:IPR008532). & (gnl|cdd|38482 : 195.0) no description available & (reliability: 476.0) & (original description: Putative CDP, Description = Coil domain protein, PFAM = PF05670)' T '35.2' 'not assigned.unknown' 'niben044scf00039430ctg002_1-5764' ' no hits & (original description: Putative AUXI1, Description = Auxilin-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00039493ctg001_4161-6678' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben044scf00039608ctg001_717-3275' '(at5g19860 : 174.0) Protein of unknown function, DUF538; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT1G55265.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86647 : 107.0) no description available & (reliability: 348.0) & (original description: Putative PGSC0003DMG400032181, Description = At5g19860, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben044scf00039662ctg000_1-1891' '(at5g64470 : 201.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 13 (TAIR:AT2G14530.1). & (reliability: 402.0) & (original description: Putative TBL12, Description = Trichome birefringence-like 13, PFAM = PF13839)' T '35.2' 'not assigned.unknown' 'niben044scf00039691ctg000_21195-24597' ' no hits & (original description: Putative PGSC0003DMG400037467, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00039708ctg003_14715-16874' ' (original description: Putative RT, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00039798ctg000_1338-2636' ' no hits & (original description: Putative HM01045, Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00039829ctg006_30399-32501' ' no hits & (original description: Putative At2g06320, Description = Retroelement pol polyprotein-like, PFAM = PF00665)' T '35.2' 'not assigned.unknown' 'niben044scf00039990ctg008_1-1619' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00040063ctg002_2875-5450' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF08268;PF00646)' T '35.2' 'not assigned.unknown' 'niben044scf00040076ctg001_1761-19733' '(at5g32470 : 724.0) Haem oxygenase-like, multi-helical; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem oxygenase-like, multi-helical (InterPro:IPR016084), TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C (InterPro:IPR004305); Has 1988 Blast hits to 1985 proteins in 797 species: Archae - 79; Bacteria - 1526; Metazoa - 2; Fungi - 151; Plants - 51; Viruses - 0; Other Eukaryotes - 179 (source: NCBI BLink). & (gnl|cdd|31161 : 138.0) no description available & (reliability: 1448.0) & (original description: Putative TNEA_C, Description = Probable aminopyrimidine aminohydrolase, mitochondrial, PFAM = PF03070)' T '35.2' 'not assigned.unknown' 'niben044scf00040076ctg005_1-821' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00040091ctg002_8506-13142' '(at5g54890 : 463.0) RNA-binding CRS1 / YhbY (CRM) domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, C globular stage, F mature embryo stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain-containing protein (TAIR:AT4G31010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85815 : 89.8) no description available & (reliability: 926.0) & (original description: Putative At5g54890, Description = CRS2-associated factor 2, mitochondrial, PFAM = PF01985;PF01985)' T '35.2' 'not assigned.unknown' 'niben044scf00040198ctg004_2040-8995' '(at2g21070 : 554.0) FIONA1 (FIO1); FUNCTIONS IN: methyltransferase activity; INVOLVED IN: photoperiodism, flowering, circadian rhythm, photoperiodism; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosyl-L-methionine dependent methyltransferase, Mett10D, predicted (InterPro:IPR017182), S-adenosyl-L-methionine dependent methyltransferase, predicted (InterPro:IPR010286). & (gnl|cdd|38123 : 319.0) no description available & (gnl|cdd|86991 : 247.0) no description available & (reliability: 1108.0) & (original description: Putative FIO1, Description = Methyltransferase-like protein, PFAM = PF05971;PF05971)' T '35.2' 'not assigned.unknown' 'niben044scf00040230ctg005_4808-8137' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00040261ctg010_1-10614' '(at4g24610 : 1186.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65440.1). & (reliability: 2372.0) & (original description: Putative At5g65440, Description = BnaA06g30300D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00040369ctg003_19925-33285' ' no hits & (original description: Putative PGSC0003DMG400001876, Description = Uncharacterized protein isoform 3, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00040427ctg018_815-4519' '(at1g80310 : 494.0) sulfate transmembrane transporters; FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547); BEST Arabidopsis thaliana protein match is: molybdate transporter 1 (TAIR:AT2G25680.1); Has 846 Blast hits to 836 proteins in 367 species: Archae - 24; Bacteria - 581; Metazoa - 20; Fungi - 62; Plants - 71; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 988.0) & (original description: Putative MOT2, Description = Molybdate transporter 2, PFAM = PF16983;PF16983)' T '35.2' 'not assigned.unknown' 'niben044scf00040444ctg000_1-1422' ' (original description: Putative extA, Description = 14 kDa proline-rich protein DC2.15, PFAM = PF14547)' T '35.2' 'not assigned.unknown' 'niben044scf00040481ctg005_35171-40196' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00040567ctg003_18328-20902' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00040601ctg008_5272-10734' '(at2g45980 : 183.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G00355.2); Has 93 Blast hits to 90 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative ATI1, Description = ATG8-interacting protein 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00040671ctg001_9355-11749' ' no hits & (original description: Putative PGSC0003DMG400015499, Description = OSJNBb0061C13.7 protein, PFAM = PF11779)' T '35.2' 'not assigned.unknown' 'niben044scf00040672ctg004_6669-13109' ' no hits & (original description: Putative F383_00866, Description = Octanoyltransferase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00040686ctg000_350-4370' '(at5g04550 : 553.0) Protein of unknown function (DUF668); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700), Protein of unknown function DUF3475 (InterPro:IPR021864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT3G23160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68572 : 127.0) no description available & (reliability: 1106.0) & (original description: Putative PGSC0003DMG400027319, Description = BnaAnng08110D protein, PFAM = PF11961;PF05003)' T '35.2' 'not assigned.unknown' 'niben044scf00040703ctg003_75-5555' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00040744ctg001_11544-14112' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00040744ctg001_15874-18722' ' (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00040787ctg002_2204-6247' '(at1g47420 : 259.0) succinate dehydrogenase 5 (SDH5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 2 (TAIR:AT1G47260.1); Has 145 Blast hits to 145 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 518.0) & (original description: Putative SDH5, Description = Succinate dehydrogenase subunit 5, mitochondrial, PFAM = PF14290)' T '35.2' 'not assigned.unknown' 'niben044scf00040814ctg005_200-2703' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben044scf00040838ctg005_1021-10378' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00041021ctg003_1-6620' '(at1g61240 : 485.0) Protein of unknown function (DUF707); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G11170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68772 : 322.0) no description available & (reliability: 970.0) & (original description: Putative gpm621, Description = Lysine ketoglutarate reductase trans-splicing related 1, PFAM = PF05212)' T '35.2' 'not assigned.unknown' 'niben044scf00041111ctg003_15279-18122' ' no hits & (original description: Putative , Description = Mutant gag-pol polyprotein, PFAM = PF03732)' T '35.2' 'not assigned.unknown' 'niben044scf00041117ctg005_4850-9007' '(at3g19970 : 368.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF829, transmembrane 53 (InterPro:IPR008547); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G18245.1); Has 401 Blast hits to 400 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 180; Fungi - 77; Plants - 116; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|69240 : 165.0) no description available & (gnl|cdd|37732 : 145.0) no description available & (reliability: 736.0) & (original description: Putative glysoja_030170, Description = Transmembrane protein 53, PFAM = PF05705)' T '35.2' 'not assigned.unknown' 'niben044scf00041288ctg001_9974-18031' '(at2g44760 : 503.0) CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF3598 (InterPro:IPR022017); Has 41 Blast hits to 35 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1006.0) & (original description: Putative , Description = Domain of Uncharacterized protein function, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00041294ctg000_7237-9943' ' no hits & (original description: Putative dhn1, Description = Dehydrin/response ABA, PFAM = PF00257)' T '35.2' 'not assigned.unknown' 'niben044scf00041320ctg008_8758-11261' ' (original description: Putative LgRT3, Description = Reverse transcriptases, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00041363ctg012_2464-9013' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00041387ctg000_9993-12450' ' (original description: Putative RT, Description = Reverse transcriptase, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00041401ctg003_1693-5357' '(at5g06220 : 205.0) LETM1-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: LETM1-like (InterPro:IPR011685); BEST Arabidopsis thaliana protein match is: LETM1-like protein (TAIR:AT3G11560.4). & (reliability: 410.0) & (original description: Putative At3g11560, Description = Putative ovule protein, PFAM = PF07766)' T '35.2' 'not assigned.unknown' 'niben044scf00041403ctg005_1-13368' '(at5g52800 : 442.0) DNA primases; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DNA primase, UL52/UL70 type, Herpesviridae (InterPro:IPR004340); Has 201 Blast hits to 173 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 82; Fungi - 0; Plants - 45; Viruses - 8; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 884.0) & (original description: Putative At5g52800, Description = DNA primase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00041436ctg001_11808-15285' ' no hits & (original description: Putative PGSC0003DMG400001819, Description = Late embryogenesis abundant protein, PFAM = PF03760)' T '35.2' 'not assigned.unknown' 'niben044scf00041498ctg001_4125-8023' ' no hits & (original description: Putative RFI2, Description = DNA-binding protein, putative, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben044scf00041528ctg001_1659-8652' '(at1g01690 : 168.0) Encodes a novel plant-specific protein that is involved in meiotic double strand break formation.; putative recombination initiation defects 3 (PRD3); Has 279 Blast hits to 273 proteins in 87 species: Archae - 2; Bacteria - 106; Metazoa - 105; Fungi - 5; Plants - 32; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (q75ry2|pair1_orysa : 84.7) Protein PAIR1 (HOMOLOGOUS PAIRING ABERRATION IN RICE MEIOSIS 1 protein) - Oryza sativa (Rice) & (reliability: 336.0) & (original description: Putative TCM_005325, Description = Recombination initiation defects 3, putative isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00041553ctg009_1-1970' ' no hits & (original description: Putative BnaC02g15020D, Description = BnaC02g15020D protein, PFAM = PF00076)' T '35.2' 'not assigned.unknown' 'niben044scf00041592ctg001_1-2285' ' no hits & (original description: Putative , Description = Putative transcriptional adapter ADA2-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00041621ctg001_5152-7554' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00041633ctg000_2529-4908' ' no hits & (original description: Putative PGSC0003DMG400045123, Description = Zinc finger containing preotein, putative, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben044scf00041663ctg004_1-1330' '(at2g25720 : 85.5) unknown protein; Has 38 Blast hits to 38 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative At2g25720, Description = At2g25720, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00041680ctg008_3429-13142' '(at5g53440 : 203.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 406.0) & (original description: Putative PGSC0003DMG400012278, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00041791ctg002_464-3847' ' (original description: Putative ODC, Description = Ornithine decarboxylase, PFAM = PF02784;PF00278)' T '35.2' 'not assigned.unknown' 'niben044scf00041819ctg002_3638-6212' ' no hits & (original description: Putative PGSC0003DMG400014888, Description = RNase H family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00041847ctg003_1-2579' ' no hits & (original description: Putative QRT1, Description = Pectinesterase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00041886ctg002_1388-5053' '(at5g53045 : 122.0) unknown protein; Has 122 Blast hits to 122 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 30; Plants - 41; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative , Description = , PFAM = PF09341)' T '35.2' 'not assigned.unknown' 'niben044scf00042061ctg000_14382-16874' ' no hits & (original description: Putative , Description = , PFAM = PF03732)' T '35.2' 'not assigned.unknown' 'niben044scf00042150ctg001_21629-26645' '(at4g25170 : 137.0) Uncharacterised conserved protein (UCP012943); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP012943 (InterPro:IPR016606); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein (UCP012943) (TAIR:AT5G61490.1); Has 19 Blast hits to 19 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00042305ctg000_250-6011' ' (original description: Putative , Description = , PFAM = PF03108)' T '35.2' 'not assigned.unknown' 'niben044scf00042407ctg003_5536-11449' '(at4g02800 : 196.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01970.1); Has 3209 Blast hits to 2720 proteins in 308 species: Archae - 13; Bacteria - 213; Metazoa - 1207; Fungi - 247; Plants - 183; Viruses - 21; Other Eukaryotes - 1325 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative BnaC03g30600D, Description = BnaC03g30600D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00042543ctg000_1-2180' ' (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00042589ctg001_106-2715' ' no hits & (original description: Putative MAMI, Description = Vesicle-associated protein 4-2, PFAM = PF00635)' T '35.2' 'not assigned.unknown' 'niben044scf00042787ctg001_5635-7832' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00042976ctg000_28924-37834' '(at3g59670 : 113.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37440.2); Has 77 Blast hits to 77 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00042984ctg004_1-8853' ' (original description: Putative pco061809, Description = Os06g0235300 protein, PFAM = PF16501)' T '35.2' 'not assigned.unknown' 'niben044scf00043005ctg002_3771-6113' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00043147ctg007_1-1752' ' no hits & (original description: Putative , Description = Putative DNA ligase 4-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00043198ctg000_1876-7664' '(at5g20680 : 570.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 16; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 14 (TAIR:AT5G64020.1); Has 1636 Blast hits to 1561 proteins in 93 species: Archae - 0; Bacteria - 11; Metazoa - 58; Fungi - 27; Plants - 1333; Viruses - 7; Other Eukaryotes - 200 (source: NCBI BLink). & (gnl|cdd|72785 : 122.0) no description available & (reliability: 1140.0) & (original description: Putative TBL16, Description = Protein trichome birefringence-like 16, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben044scf00043278ctg004_1-2504' ' no hits & (original description: Putative PGSC0003DMG400024370, Description = , PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben044scf00043323ctg001_1029-3221' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00043391ctg012_221-2722' ' (original description: Putative BAM6, Description = Beta-amylase, PFAM = PF05687)' T '35.2' 'not assigned.unknown' 'niben044scf00043415ctg000_1130-6927' '(at5g66600 : 378.0) Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT2G23700.1). & (gnl|cdd|68359 : 186.0) no description available & (reliability: 756.0) & (original description: Putative BnaC04g36150D, Description = BnaC04g36150D protein, PFAM = PF04784;PF14389)' T '35.2' 'not assigned.unknown' 'niben044scf00043421ctg007_1-3204' '(at1g01360 : 233.0) Encodes RCAR1 (regulatory components of ABA receptor). Interacts with and regulates the type 2C protein phosphatases (PP2Cs) ABI1 and ABI2. Functions as abscisic acid sensor.; regulatory component of ABA receptor 1 (RCAR1); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: PYR1-like 7 (TAIR:AT4G01026.1); Has 395 Blast hits to 395 proteins in 28 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 392; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative F3I3, Description = Bet v I allergen-like, PFAM = PF10604)' T '35.2' 'not assigned.unknown' 'niben044scf00043481ctg002_544-2827' '(at4g21105 : 81.6) cytochrome-c oxidases;electron carriers; FUNCTIONS IN: electron carrier activity, cytochrome-c oxidase activity; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIIa (InterPro:IPR003177); Has 60 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative At4g21105, Description = At4g21108/At4g21108, PFAM = PF02238)' T '35.2' 'not assigned.unknown' 'niben044scf00043503ctg006_10638-17530' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00043633ctg002_5777-8305' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00043749ctg008_1-2579' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00043821ctg003_1655-11874' '(at1g34320 : 808.0) Protein of unknown function (DUF668); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700), Protein of unknown function DUF3475 (InterPro:IPR021864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT5G08660.1); Has 339 Blast hits to 273 proteins in 21 species: Archae - 0; Bacteria - 1; Metazoa - 3; Fungi - 0; Plants - 335; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68572 : 121.0) no description available & (reliability: 1616.0) & (original description: Putative At1g34320, Description = At1g34320, PFAM = PF05003;PF11961)' T '35.2' 'not assigned.unknown' 'niben044scf00043925ctg006_20861-26945' '(at1g05950 : 156.0) unknown protein; Has 50 Blast hits to 45 proteins in 14 species: Archae - 5; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00043957ctg013_295-1717' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00043998ctg001_1-7054' ' no hits & (original description: Putative At1g68680, Description = At1g68680, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00044016ctg003_12441-14605' ' no hits & (original description: Putative rpl32, Description = 50S ribosomal protein L32, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00044175ctg000_537-2243' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00044203ctg002_172-2870' ' no hits & (original description: Putative MADSy1, Description = Type I MADS box transcription factor, PFAM = PF00319)' T '35.2' 'not assigned.unknown' 'niben044scf00044231ctg001_712-8253' '(at2g47960 : 548.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF974 (InterPro:IPR010378); Has 285 Blast hits to 284 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 150; Fungi - 68; Plants - 32; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|69666 : 335.0) no description available & (gnl|cdd|37836 : 208.0) no description available & (reliability: 1096.0) & (original description: Putative SCC3, Description = , PFAM = PF06159)' T '35.2' 'not assigned.unknown' 'niben044scf00044297ctg000_13148-16154' '(at5g17640 : 567.0) Protein of unknown function (DUF1005); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1005 (InterPro:IPR010410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1005) (TAIR:AT1G10020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|69725 : 239.0) no description available & (reliability: 1134.0) & (original description: Putative At4g29310, Description = Putative uncharacterized protein AT4g29310, PFAM = PF06219)' T '35.2' 'not assigned.unknown' 'niben044scf00044374ctg001_810-2387' ' no hits & (original description: Putative , Description = , PFAM = PF13650)' T '35.2' 'not assigned.unknown' 'niben044scf00044392ctg000_1-1551' ' no hits & (original description: Putative , Description = , PFAM = PF03754)' T '35.2' 'not assigned.unknown' 'niben044scf00044485ctg001_260-2359' ' no hits & (original description: Putative At3g12955, Description = At3g12955, PFAM = PF02519)' T '35.2' 'not assigned.unknown' 'niben044scf00044556ctg004_2379-3742' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00044767ctg008_1407-10848' '(at4g00026 : 270.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim21 (InterPro:IPR013261); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|71727 : 85.3) no description available & (reliability: 540.0) & (original description: Putative BnaAnng20480D, Description = BnaAnng20480D protein, PFAM = PF08294)' T '35.2' 'not assigned.unknown' 'niben044scf00044791ctg003_4610-6614' ' no hits & (original description: Putative , Description = , PFAM = PF02201)' T '35.2' 'not assigned.unknown' 'niben044scf00044874ctg006_1-2123' ' no hits & (original description: Putative PGSC0003DMG400011727, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00044985ctg005_2487-4765' ' no hits & (original description: Putative PGSC0003DMG400003311, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00045053ctg001_3497-7656' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00045063ctg001_35315-37887' '(at1g15760 : 164.0) Sterile alpha motif (SAM) domain-containing protein; CONTAINS InterPro DOMAIN/s: Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 2 (InterPro:IPR011510); BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G80520.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative , Description = , PFAM = PF07647)' T '35.2' 'not assigned.unknown' 'niben044scf00045065ctg002_12175-15830' ' no hits & (original description: Putative am4, Description = Extensin-like repeat protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00045179ctg005_424-3444' ' (original description: Putative PGSC0003DMG400005255, Description = , PFAM = PF13920)' T '35.2' 'not assigned.unknown' 'niben044scf00045231ctg001_3034-4694' ' no hits & (original description: Putative At2g04670, Description = DNA/RNA polymerases superfamily protein, PFAM = PF08284)' T '35.2' 'not assigned.unknown' 'niben044scf00045234ctg001_5398-7718' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00045239ctg003_10604-14209' '(at5g13660 : 235.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G59830.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 470.0) & (original description: Putative F383_01599, Description = N-lysine methyltransferase SETD8-A, PFAM = PF16135)' T '35.2' 'not assigned.unknown' 'niben044scf00045255ctg001_3821-6372' ' (original description: Putative RT, Description = Reverse transcriptase, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00045366ctg002_1-1660' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00045440ctg008_191-6842' '(at2g32500 : 240.0) Stress responsive alpha-beta barrel domain protein; CONTAINS InterPro DOMAIN/s: Stress responsive alpha-beta barrel (InterPro:IPR013097), Dimeric alpha-beta barrel (InterPro:IPR011008); BEST Arabidopsis thaliana protein match is: Stress responsive alpha-beta barrel domain protein (TAIR:AT2G31670.1); Has 68 Blast hits to 66 proteins in 17 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 480.0) & (original description: Putative , Description = , PFAM = PF07876)' T '35.2' 'not assigned.unknown' 'niben044scf00045568ctg000_6251-8469' ' no hits & (original description: Putative , Description = HIP116 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00045571ctg003_11884-17174' '(at2g39650 : 241.0) Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT2G38820.2); Has 395 Blast hits to 393 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 393; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68298 : 177.0) no description available & (reliability: 482.0) & (original description: Putative , Description = , PFAM = PF04720)' T '35.2' 'not assigned.unknown' 'niben044scf00045681ctg001_1-3588' '(at4g38225 : 272.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 544.0) & (original description: Putative At4g38220, Description = BnaA06g05700D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00045777ctg006_8915-14931' '(at3g22810 : 401.0) FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pleckstrin-like, plant (InterPro:IPR013666), Protein of unknown function DUF828 (InterPro:IPR008546), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region (TAIR:AT4G14740.2); Has 431 Blast hits to 261 proteins in 42 species: Archae - 3; Bacteria - 14; Metazoa - 18; Fungi - 2; Plants - 219; Viruses - 0; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|71887 : 170.0) no description available & (reliability: 802.0) & (original description: Putative VAB, Description = VAN3-binding protein, PFAM = PF05703;PF08458)' T '35.2' 'not assigned.unknown' 'niben044scf00045834ctg000_11836-13675' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00045835ctg000_6930-9857' ' no hits & (original description: Putative PGSC0003DMG400013047, Description = Transposase, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben044scf00045887ctg000_12102-13707' ' no hits & (original description: Putative , Description = DNA/RNA polymerases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00046045ctg001_1-5090' '(at1g52155 : 404.0) unknown protein; Has 37 Blast hits to 37 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 808.0) & (original description: Putative BnaA06g01930D, Description = BnaA06g01930D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00046078ctg004_1131-5941' '(gnl|cdd|70188 : 176.0) no description available & (at4g36660 : 138.0) Protein of unknown function (DUF1195); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1195 (InterPro:IPR010608); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1195) (TAIR:AT5G65650.1); Has 67 Blast hits to 67 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative At4g36660, Description = At4g36660, PFAM = PF06708)' T '35.2' 'not assigned.unknown' 'niben044scf00046085ctg006_1-1464' ' no hits & (original description: Putative PGSC0003DMG400000813, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00046129ctg002_1114-7199' '(at3g04020 : 127.0) unknown protein; Has 26 Blast hits to 25 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative pco085724, Description = BnaA05g37370D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00046201ctg003_1-5628' ' no hits & (original description: Putative , Description = Putative RNA-binding protein 46-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00046231ctg002_1-1910' ' no hits & (original description: Putative , Description = , PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben044scf00046317ctg002_1-1285' ' no hits & (original description: Putative , Description = Mitotic checkpoint serine/threonine-protein kinase BUB1, putative isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00046319ctg001_10036-17772' ' no hits & (original description: Putative MTR_3g093470, Description = COP1-interacting-like protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00046332ctg000_420-8242' '(at1g78420 : 298.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G17145.1). & (gnl|cdd|38000 : 184.0) no description available & (reliability: 596.0) & (original description: Putative BnaCnng44700D, Description = BnaCnng44700D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00046485ctg000_1-1530' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00046571ctg002_1-1360' ' (original description: Putative rplA, Description = Ribosomal protein, PFAM = PF00687)' T '35.2' 'not assigned.unknown' 'niben044scf00046600ctg000_162-6401' '(at5g11640 : 247.0) Thioredoxin superfamily protein; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36132 : 195.0) no description available & (gnl|cdd|48511 : 151.0) no description available & (reliability: 494.0) & (original description: Putative BnaA10g20930D, Description = BnaA10g20930D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00046760ctg002_8627-12632' ' no hits & (original description: Putative , Description = , PFAM = PF02902)' T '35.2' 'not assigned.unknown' 'niben044scf00046767ctg001_1-2313' ' no hits & (original description: Putative PGSC0003DMG400047107, Description = Pol polyprotein, PFAM = PF00665)' T '35.2' 'not assigned.unknown' 'niben044scf00046767ctg001_12762-15729' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00046967ctg002_19457-21022' ' no hits & (original description: Putative str246N, Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00047007ctg002_22543-32491' '(at5g55060 : 594.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58510.1). & (gnl|cdd|37601 : 390.0) no description available & (reliability: 1188.0) & (original description: Putative BnaA10g09330D, Description = BnaA10g09330D protein, PFAM = PF13890)' T '35.2' 'not assigned.unknown' 'niben044scf00047069ctg004_286-2594' ' no hits & (original description: Putative At1g67620, Description = Lojap-related protein, PFAM = PF02410)' T '35.2' 'not assigned.unknown' 'niben044scf00047259ctg003_11969-14739' '(at4g24110 : 106.0) unknown protein; Has 76 Blast hits to 76 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative BnaC01g15930D, Description = BnaC01g15930D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00047303ctg006_210-4283' '(at4g21460 : 447.0) Ribosomal protein S24/S35, mitochondrial; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Ribosomal protein S24/S35, mitochondrial (InterPro:IPR019349); BEST Arabidopsis thaliana protein match is: Ribosomal protein S24/S35, mitochondrial (TAIR:AT3G18240.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39136 : 135.0) no description available & (reliability: 894.0) & (original description: Putative At3g18240, Description = AT3G18240 protein, PFAM = PF10213)' T '35.2' 'not assigned.unknown' 'niben044scf00047425ctg001_7271-12705' ' no hits & (original description: Putative PGSC0003DMG400026790, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00047693ctg001_2366-6471' '(gnl|cdd|69095 : 192.0) no description available & (at1g61260 : 122.0) Protein of unknown function (DUF761); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF761) (TAIR:AT1G11220.1); Has 110 Blast hits to 108 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 108; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative CFE1, Description = Cotton fiber expressed protein 1, PFAM = PF14364;PF05553)' T '35.2' 'not assigned.unknown' 'niben044scf00047742ctg003_420-4819' ' no hits & (original description: Putative PGSC0003DMG400025625, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00047833ctg003_1-3693' ' no hits & (original description: Putative At2g42760, Description = At2g42760, PFAM = PF07939)' T '35.2' 'not assigned.unknown' 'niben044scf00047851ctg000_8533-14033' '(gnl|cdd|69860 : 140.0) no description available & (at2g32580 : 119.0) Protein of unknown function (DUF1068); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1068 (InterPro:IPR010471); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1068) (TAIR:AT1G05070.1). & (reliability: 238.0) & (original description: Putative F383_27242, Description = Gamma-glutamyl hydrolase, PFAM = PF06364)' T '35.2' 'not assigned.unknown' 'niben044scf00047916ctg002_24-4463' '(at1g04030 : 162.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44040.1); Has 1835 Blast hits to 1511 proteins in 238 species: Archae - 7; Bacteria - 164; Metazoa - 377; Fungi - 135; Plants - 187; Viruses - 22; Other Eukaryotes - 943 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative TCM_026173, Description = Uncharacterized protein isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00047968ctg008_11450-19502' '(at5g52540 : 347.0) Protein of unknown function (DUF819); LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF819 (InterPro:IPR008537); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF819) (TAIR:AT5G24000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|69220 : 211.0) no description available & (reliability: 694.0) & (original description: Putative BnaC09g28590D, Description = BnaC09g28590D protein, PFAM = PF05684)' T '35.2' 'not assigned.unknown' 'niben044scf00047988ctg002_1-2862' '(at3g27470 : 140.0) Protein of unknown function (DUF707); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G67850.2); Has 321 Blast hits to 320 proteins in 25 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 305; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative gpm621, Description = Lysine ketoglutarate reductase trans-splicing related 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00048058ctg003_1-1715' ' no hits & (original description: Putative AGD5, Description = Putative ADP-ribosylation factor GTPase-activating protein AGD5, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00048133ctg001_2348-6252' '(at5g63000 : 198.0) Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); Has 40 Blast hits to 40 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|39808 : 132.0) no description available & (reliability: 396.0) & (original description: Putative BnaA06g22470D, Description = BnaA06g22470D protein, PFAM = PF02466)' T '35.2' 'not assigned.unknown' 'niben044scf00048226ctg000_834-4052' '(at5g22090 : 137.0) Protein of unknown function (DUF3049); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) (TAIR:AT4G02810.1). & (reliability: 274.0) & (original description: Putative glysoja_032408, Description = Protein FAF-like, chloroplastic, PFAM = PF11250)' T '35.2' 'not assigned.unknown' 'niben044scf00048666ctg001_7467-12218' '(at4g21210 : 442.0) Encodes a PPDK regulatory protein that has both protein kinase and protein phosphatase activities towards PPDK (pyruvate orthophosphate dikinase).; PPDK regulatory protein (RP1); FUNCTIONS IN: protein kinase activity, phosphoprotein phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate Pi dikinase regulator (InterPro:IPR017409), Protein of unknown function DUF299, phosphotransferase, predicted (InterPro:IPR005177); BEST Arabidopsis thaliana protein match is: PPDK regulatory protein 2 (TAIR:AT3G01200.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67248 : 330.0) no description available & (reliability: 884.0) & (original description: Putative RP1, Description = Pyruvate, phosphate dikinase regulatory protein 1, chloroplastic, PFAM = PF03618)' T '35.2' 'not assigned.unknown' 'niben044scf00048676ctg001_3365-8988' '(at1g73060 : 317.0) Low PSII Accumulation 3 (LPA3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1995 (InterPro:IPR018962); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF1995) (TAIR:AT5G48790.1); Has 97 Blast hits to 97 proteins in 32 species: Archae - 0; Bacteria - 18; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|87898 : 120.0) no description available & (reliability: 634.0) & (original description: Putative LPA3, Description = Low PSII Accumulation 3 isoform 1, PFAM = PF09353)' T '35.2' 'not assigned.unknown' 'niben044scf00048793ctg001_1013-3913' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00048793ctg001_1039-11216' '(at3g46750 : 85.9) unknown protein; Has 2631 Blast hits to 1984 proteins in 271 species: Archae - 6; Bacteria - 163; Metazoa - 1232; Fungi - 253; Plants - 141; Viruses - 8; Other Eukaryotes - 828 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00049104ctg002_1311-4969' '(at5g47900 : 210.0) Protein of unknown function (DUF1624); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1624 (InterPro:IPR012429); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1624) (TAIR:AT5G27730.1). & (gnl|cdd|39881 : 149.0) no description available & (reliability: 420.0) & (original description: Putative ophh-57A, Description = Putative uncharacterized protein ophh-57A, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00049428ctg002_11512-14120' ' no hits & (original description: Putative KCS, Description = Putative elongation of fatty acids protein 3-like, PFAM = PF01151)' T '35.2' 'not assigned.unknown' 'niben044scf00049556ctg000_1-2070' ' no hits & (original description: Putative , Description = , PFAM = PF00646)' T '35.2' 'not assigned.unknown' 'niben044scf00049658ctg005_1-6639' '(at2g31580 : 397.0) tRNAHis guanylyltransferase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: tRNAHis guanylyltransferase (InterPro:IPR007537); BEST Arabidopsis thaliana protein match is: tRNAHis guanylyltransferase (TAIR:AT2G32320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37932 : 293.0) no description available & (gnl|cdd|68035 : 237.0) no description available & (reliability: 794.0) & (original description: Putative thg1, Description = tRNA(His) guanylyltransferase, PFAM = PF04446;PF14413)' T '35.2' 'not assigned.unknown' 'niben044scf00049680ctg005_3047-4961' ' no hits & (original description: Putative glysoja_036367, Description = Aldehyde dehydrogenase family 6 member B2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00049761ctg001_17500-20446' '(at1g24480 : 325.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G24805.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 650.0) & (original description: Putative T407, Description = Putative uncharacterized protein T407, PFAM = PF08241)' T '35.2' 'not assigned.unknown' 'niben044scf00049780ctg001_1-3698' '(at2g26200 : 194.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410), Methyltransferase type 12 (InterPro:IPR013217); BEST Arabidopsis thaliana protein match is: Methyltransferase family protein (TAIR:AT1G54650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37572 : 135.0) no description available & (reliability: 388.0) & (original description: Putative ORF01, Description = Actin binding methyltransferase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00049941ctg001_14385-17260' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00049946ctg003_1-3192' '(at5g57280 : 175.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, methyltransferase, Williams-Beuren syndrome (InterPro:IPR022238), Methyltransferase type 11 (InterPro:IPR013216); Has 984 Blast hits to 969 proteins in 433 species: Archae - 16; Bacteria - 445; Metazoa - 145; Fungi - 145; Plants - 54; Viruses - 0; Other Eukaryotes - 179 (source: NCBI BLink). & (gnl|cdd|36754 : 161.0) no description available & (reliability: 350.0) & (original description: Putative 18922, Description = Putative methyltransferase WBSCR22, PFAM = PF13649)' T '35.2' 'not assigned.unknown' 'niben044scf00050054ctg001_3815-8114' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00050083ctg001_1-5726' '(at1g67850 : 542.0) Protein of unknown function (DUF707); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G13000.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68772 : 529.0) no description available & (reliability: 1084.0) & (original description: Putative LOC100273084, Description = Lysine ketoglutarate reductase trans-splicing related 1, PFAM = PF05212)' T '35.2' 'not assigned.unknown' 'niben044scf00050128ctg000_13163-21098' '(at4g16650 : 776.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G76270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66790 : 516.0) no description available & (reliability: 1552.0) & (original description: Putative axi 1, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T '35.2' 'not assigned.unknown' 'niben044scf00050213ctg000_1362-4467' ' no hits & (original description: Putative PGSC0003DMG402001401, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00050280ctg000_4058-14549' '(at5g61910 : 124.0) DCD (Development and Cell Death) domain protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 membrane targeting protein (InterPro:IPR018029), Kelch related (InterPro:IPR013089), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Calcium-dependent phospholipid-binding Copine family protein (TAIR:AT5G61900.3). & (reliability: 248.0) & (original description: Putative , Description = DCD domain protein, putative isoform 1, PFAM = PF10539)' T '35.2' 'not assigned.unknown' 'niben044scf00050999ctg002_17154-22623' '(at4g39380 : 159.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: TSL-kinase interacting protein 1 (TAIR:AT2G36960.2). & (reliability: 318.0) & (original description: Putative TKI1, Description = TSL-kinase interacting 1-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00051296ctg002_1-1218' ' no hits & (original description: Putative PGSC0003DMG400012157, Description = Leucine-rich repeat protein kinase family protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00051302ctg002_1-1577' ' no hits & (original description: Putative PGSC0003DMG400012475, Description = Putative werner syndrome ATP-dependent helicase-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00051341ctg004_142-6879' ' (original description: Putative Os11g0136500, Description = Os11g0136500 protein, PFAM = PF01648)' T '35.2' 'not assigned.unknown' 'niben044scf00051412ctg000_7618-14299' '(at4g35240 : 528.0) Protein of unknown function (DUF630 and DUF632); EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT2G17110.1). & (gnl|cdd|68357 : 330.0) no description available & (reliability: 1056.0) & (original description: Putative PGSC0003DMG400018656, Description = Putative uncharacterized protein At1g77500, PFAM = PF04783;PF04782)' T '35.2' 'not assigned.unknown' 'niben044scf00051642ctg000_1-5635' '(at5g01510 : 296.0) ROOT UV-B SENSITIVE 5 (RUS5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT3G45890.1); Has 426 Blast hits to 424 proteins in 125 species: Archae - 0; Bacteria - 2; Metazoa - 111; Fungi - 69; Plants - 183; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|68458 : 226.0) no description available & (gnl|cdd|39450 : 203.0) no description available & (reliability: 592.0) & (original description: Putative Sb03g006560, Description = Putative uncharacterized protein Sb03g006560, PFAM = PF04884)' T '35.2' 'not assigned.unknown' 'niben044scf00051841ctg002_1-4340' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00051862ctg002_8115-10409' ' no hits & (original description: Putative PGSC0003DMG400007262, Description = BnaA08g31680D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00052083ctg000_2022-6502' '(at4g31410 : 308.0) Protein of unknown function (DUF1644); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1644) (TAIR:AT3G24740.2); Has 266 Blast hits to 247 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 263; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|71240 : 207.0) no description available & (reliability: 616.0) & (original description: Putative Os02g0150900, Description = Os02g0150900 protein, PFAM = PF07800)' T '35.2' 'not assigned.unknown' 'niben044scf00052178ctg000_3864-6208' ' no hits & (original description: Putative PGSC0003DMG400002751, Description = , PFAM = PF15699)' T '35.2' 'not assigned.unknown' 'niben044scf00052287ctg001_31344-33227' ' no hits & (original description: Putative Dif54, Description = Extensin-like protein Dif54, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00052330ctg001_1-1705' '(at2g30990 : 82.0) Protein of unknown function (DUF688); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF688) (TAIR:AT1G29240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative , Description = Protein arginine N-methyltransferase 7, PFAM = PF05097)' T '35.2' 'not assigned.unknown' 'niben044scf00052375ctg001_1-1589' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00052864ctg004_1-10744' '(at2g26470 : 340.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF159 (InterPro:IPR003738); Has 3646 Blast hits to 3636 proteins in 1001 species: Archae - 41; Bacteria - 1922; Metazoa - 142; Fungi - 125; Plants - 44; Viruses - 14; Other Eukaryotes - 1358 (source: NCBI BLink). & (gnl|cdd|37829 : 286.0) no description available & (gnl|cdd|86038 : 226.0) no description available & (reliability: 680.0) & (original description: Putative SMU2, Description = Duf159 domain protein, PFAM = PF02586)' T '35.2' 'not assigned.unknown' 'niben044scf00052900ctg000_1387-4745' '(at5g47900 : 523.0) Protein of unknown function (DUF1624); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1624 (InterPro:IPR012429); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1624) (TAIR:AT5G27730.1). & (gnl|cdd|39881 : 388.0) no description available & (gnl|cdd|34021 : 125.0) no description available & (reliability: 1046.0) & (original description: Putative Sb06g015200, Description = Putative uncharacterized protein Sb06g015200, PFAM = PF07786)' T '35.2' 'not assigned.unknown' 'niben044scf00053044ctg002_1-3821' '(at5g48240 : 172.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 286 Blast hits to 283 proteins in 145 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 97; Plants - 41; Viruses - 1; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative At5g48240, Description = RRP15-like protein, PFAM = PF07890)' T '35.2' 'not assigned.unknown' 'niben044scf00053054ctg002_1-4147' '(at1g15215 : 108.0) BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative PGSC0003DMG400002529, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00053192ctg004_2143-6432' '(at3g51010 : 143.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative PGSC0003DMG400025306, Description = At3g51010, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00053401ctg000_1802-7981' '(at5g26760 : 239.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF408 (InterPro:IPR007308); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86568 : 113.0) no description available & (reliability: 478.0) & (original description: Putative At5g26760, Description = RNA polymerase II-associated protein 2 homolog, PFAM = PF04181)' T '35.2' 'not assigned.unknown' 'niben044scf00053486ctg002_10799-13253' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00053552ctg000_3710-9211' '(at1g16210 : 172.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1014 (InterPro:IPR010422); Has 16107 Blast hits to 8386 proteins in 1107 species: Archae - 26; Bacteria - 3370; Metazoa - 4013; Fungi - 1516; Plants - 526; Viruses - 120; Other Eukaryotes - 6536 (source: NCBI BLink). & (gnl|cdd|87049 : 118.0) no description available & (gnl|cdd|38433 : 106.0) no description available & (reliability: 344.0) & (original description: Putative BnaA07g38860D, Description = BnaA07g38860D protein, PFAM = PF06244)' T '35.2' 'not assigned.unknown' 'niben044scf00053801ctg003_586-5104' '(at3g48480 : 214.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: UB-like protease 1D (TAIR:AT1G60220.1); Has 84 Blast hits to 84 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 30; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative Sb05g009053, Description = Putative uncharacterized protein Sb05g009053, PFAM = PF02902)' T '35.2' 'not assigned.unknown' 'niben044scf00053811ctg001_1756-5057' ' no hits & (original description: Putative FGENESH1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben044scf00053921ctg000_1-500' ' no hits & (original description: Putative , Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben044scf00053955ctg001_245-3565' '(at3g24740 : 268.0) Protein of unknown function (DUF1644); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1644) (TAIR:AT1G68140.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|71240 : 112.0) no description available & (reliability: 536.0) & (original description: Putative glysoja_039343, Description = Small nuclear ribonucleoprotein-associated B, PFAM = PF07800)' T '35.2' 'not assigned.unknown' 'niben044scf00054048ctg004_1309-25044' '(at5g50840 : 263.0) CONTAINS InterPro DOMAIN/s: Taxilin (InterPro:IPR019132); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37061 : 84.8) no description available & (reliability: 526.0) & (original description: Putative BnaC03g16380D, Description = BnaC03g16380D protein, PFAM = PF09728)' T '35.2' 'not assigned.unknown' 'niben044scf00054101ctg002_22083-24718' ' no hits & (original description: Putative PGSC0003DMG402010796, Description = Heat shock family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00054324ctg004_1-3714' '(at1g33410 : 111.0) SUPPRESSOR OF AUXIN RESISTANCE1 (SAR1); INVOLVED IN: mRNA export from nucleus, response to auxin stimulus, developmental process; LOCATED IN: nuclear membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoporin Nup120/160 (InterPro:IPR021717). & (reliability: 222.0) & (original description: Putative Sb04g003270, Description = Putative uncharacterized protein Sb04g003270, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00054339ctg001_987-4393' '(at3g50340 : 441.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G67020.1); Has 128 Blast hits to 128 proteins in 39 species: Archae - 0; Bacteria - 46; Metazoa - 0; Fungi - 3; Plants - 76; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 882.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00054352ctg004_1173-4000' '(at4g22758 : 84.0) unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G27830.1). & (reliability: 168.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00054457ctg006_5893-9174' '(at4g04614 : 94.4) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative PGSC0003DMG400019353, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00054545ctg003_1-7709' '(at4g31080 : 382.0) Protein of unknown function (DUF2296); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2296 (InterPro:IPR019273); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF2296) (TAIR:AT2G24330.1). & (gnl|cdd|38057 : 141.0) no description available & (reliability: 764.0) & (original description: Putative At2g24330, Description = Uncharacterized protein At2g24330, PFAM = PF10058)' T '35.2' 'not assigned.unknown' 'niben044scf00054729ctg000_3629-5967' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00054743ctg000_1-7346' '(at1g73020 : 774.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF590 (InterPro:IPR007632). & (gnl|cdd|37724 : 380.0) no description available & (gnl|cdd|68131 : 178.0) no description available & (reliability: 1548.0) & (original description: Putative At1g73020, Description = Anoctamin-like protein At1g73020, PFAM = PF04547)' T '35.2' 'not assigned.unknown' 'niben044scf00054830ctg000_3084-5296' ' (original description: Putative Tgt1ORF2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben044scf00054871ctg008_1-4796' '(at4g27500 : 322.0) interacts with H+-ATPase, and regulates its activity; proton pump interactor 1 (PPI1); FUNCTIONS IN: protein binding; INVOLVED IN: regulation of proton transport; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36690.1); Has 56187 Blast hits to 35171 proteins in 2461 species: Archae - 533; Bacteria - 11472; Metazoa - 20772; Fungi - 6196; Plants - 2564; Viruses - 257; Other Eukaryotes - 14393 (source: NCBI BLink). & (reliability: 644.0) & (original description: Putative PPI1, Description = Proton pump-interactor 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00054926ctg000_828-4393' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00055076ctg002_1-2602' '(at5g37840 : 148.0) BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative At1g66480, Description = At2g01340, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben044scf00055196ctg000_6194-13162' '(at2g25310 : 221.0) FUNCTIONS IN: carbohydrate binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate-binding-like fold (InterPro:IPR013784), Protein of unknown function DUF2012 (InterPro:IPR019008); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF2012) (TAIR:AT4G32130.1); Has 307 Blast hits to 307 proteins in 138 species: Archae - 0; Bacteria - 14; Metazoa - 141; Fungi - 68; Plants - 50; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|87975 : 144.0) no description available & (gnl|cdd|38516 : 117.0) no description available & (reliability: 442.0) & (original description: Putative PGSC0003DMG400029900, Description = Putative uncharacterized protein At2g25310, PFAM = PF09430)' T '35.2' 'not assigned.unknown' 'niben044scf00055221ctg001_14907-18891' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00055228ctg002_1-3020' ' no hits & (original description: Putative NbARP, Description = ROX1 homologue, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00055320ctg000_1254-5113' '(at4g01935 : 270.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 37 Blast hits to 37 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 540.0) & (original description: Putative Os01g0252600, Description = Os01g0252600 protein, PFAM = PF07281)' T '35.2' 'not assigned.unknown' 'niben044scf00055320ctg000_1283-5024' '(at4g01935 : 176.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 37 Blast hits to 37 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative At4g01935, Description = BnaA07g26660D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00055335ctg004_1-3644' '(at4g17840 : 300.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 600.0) & (original description: Putative At4g17840, Description = CAAX amino terminal protease, PFAM = PF02517)' T '35.2' 'not assigned.unknown' 'niben044scf00055464ctg002_1-1657' ' no hits & (original description: Putative PGSC0003DMG400009028, Description = Uncharacterized protein isoform 1, PFAM = PF11250)' T '35.2' 'not assigned.unknown' 'niben044scf00055466ctg000_1-8899' ' no hits & (original description: Putative LOL2, Description = BnaC03g64060D protein, PFAM = PF06943)' T '35.2' 'not assigned.unknown' 'niben044scf00055598ctg001_2425-7715' '(at1g63610 : 358.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 716.0) & (original description: Putative Sb04g038580, Description = Putative uncharacterized protein Sb04g038580, PFAM = PF05542;PF05542)' T '35.2' 'not assigned.unknown' 'niben044scf00055693ctg000_1-8265' '(at4g34310 : 1193.0) alpha/beta-Hydrolases superfamily protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37240 : 171.0) no description available & (reliability: 2386.0) & (original description: Putative At4g34310, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00055863ctg001_25372-47000' '(at5g58100 : 1319.0) unknown protein; INVOLVED IN: pollen exine formation; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 2638.0) & (original description: Putative At5g58100, Description = Os02g0469200 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00055997ctg001_151-3885' '(at5g24600 : 285.0) Protein of unknown function, DUF599; INVOLVED IN: biological_process unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF599 (InterPro:IPR006747); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF599 (TAIR:AT3G18215.1). & (gnl|cdd|68233 : 224.0) no description available & (reliability: 570.0) & (original description: Putative At5g24600, Description = At5g24600, PFAM = PF04654)' T '35.2' 'not assigned.unknown' 'niben044scf00056083ctg001_2116-6908' ' no hits & (original description: Putative PGSC0003DMG400028325, Description = , PFAM = PF03763)' T '35.2' 'not assigned.unknown' 'niben044scf00056092ctg005_30337-33126' ' no hits & (original description: Putative PGSC0003DMG400021361, Description = AtDOF3.5, PFAM = PF02701)' T '35.2' 'not assigned.unknown' 'niben044scf00056232ctg003_1242-3730' ' no hits & (original description: Putative TAC1, Description = C2H2 and C2HC zinc fingers superfamily protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00056289ctg002_2871-7296' '(at3g07640 : 167.0) unknown protein; Has 27 Blast hits to 27 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00056289ctg002_7080-22190' '(at2g04235 : 128.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 713 Blast hits to 345 proteins in 122 species: Archae - 2; Bacteria - 262; Metazoa - 138; Fungi - 55; Plants - 39; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative BnaCnng00500D, Description = BnaCnng00500D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00056289ctg002_7297-22121' '(at2g04235 : 181.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 713 Blast hits to 345 proteins in 122 species: Archae - 2; Bacteria - 262; Metazoa - 138; Fungi - 55; Plants - 39; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative BnaCnng00500D, Description = BnaCnng00500D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00056289ctg003_1-3692' '(at2g04235 : 84.7) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 713 Blast hits to 345 proteins in 122 species: Archae - 2; Bacteria - 262; Metazoa - 138; Fungi - 55; Plants - 39; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative 184-1d10, Description = 184, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00056292ctg000_2517-7555' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00056426ctg003_9767-11717' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00056469ctg003_2635-5194' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00056512ctg002_1-1885' ' no hits & (original description: Putative RLK1, Description = Serine/threonine-protein kinase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00056741ctg001_1066-4706' ' no hits & (original description: Putative PGSC0003DMG400026237, Description = Transmembrane protein, putative, PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben044scf00056938ctg000_17490-21111' '(at2g42780 : 149.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684). & (reliability: 298.0) & (original description: Putative PGSC0003DMG400017292, Description = RNA polymerase II transcription factor SIII (Elongin) subunit A, PFAM = PF06881)' T '35.2' 'not assigned.unknown' 'niben044scf00056960ctg001_983-3837' ' no hits & (original description: Putative PGSC0003DMG400041236, Description = At1g31460, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00056989ctg002_1-2927' '(at1g09330 : 269.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF846, eukaryotic (InterPro:IPR008564); Has 518 Blast hits to 518 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 193; Fungi - 145; Plants - 73; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|38405 : 202.0) no description available & (gnl|cdd|69362 : 185.0) no description available & (reliability: 538.0) & (original description: Putative ECH, Description = Golgi apparatus membrane protein-like protein ECHIDNA, PFAM = PF05832)' T '35.2' 'not assigned.unknown' 'niben044scf00057036ctg003_1-6158' '(at3g12300 : 354.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF667 (InterPro:IPR007714); Has 373 Blast hits to 371 proteins in 116 species: Archae - 0; Bacteria - 0; Metazoa - 213; Fungi - 4; Plants - 71; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|68587 : 349.0) no description available & (gnl|cdd|38423 : 300.0) no description available & (reliability: 708.0) & (original description: Putative Bug22, Description = Cilia- and flagella-associated protein 20, PFAM = PF05018)' T '35.2' 'not assigned.unknown' 'niben044scf00057107ctg001_3309-6759' ' no hits & (original description: Putative At5g17930, Description = BnaA02g03780D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00057333ctg001_1-5364' '(at2g39740 : 276.0) Nucleotidyltransferase family protein; BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT3G45750.1); Has 1708 Blast hits to 1608 proteins in 227 species: Archae - 0; Bacteria - 13; Metazoa - 799; Fungi - 328; Plants - 255; Viruses - 0; Other Eukaryotes - 313 (source: NCBI BLink). & (gnl|cdd|37488 : 138.0) no description available & (gnl|cdd|34857 : 95.8) no description available & (reliability: 552.0) & (original description: Putative Os01g0846450, Description = Os01g0846450 protein, PFAM = PF01909)' T '35.2' 'not assigned.unknown' 'niben044scf00057365ctg001_2409-10589' '(at4g28910 : 227.0) novel interactor of JAZ (NINJA); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: response to jasmonic acid stimulus, jasmonic acid mediated signaling pathway; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1675 (InterPro:IPR012463); BEST Arabidopsis thaliana protein match is: ABI five binding protein 3 (TAIR:AT3G29575.4); Has 317 Blast hits to 301 proteins in 73 species: Archae - 2; Bacteria - 15; Metazoa - 43; Fungi - 39; Plants - 175; Viruses - 3; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative MC410, Description = Ninja-family protein mc410, PFAM = PF16135)' T '35.2' 'not assigned.unknown' 'niben044scf00057990ctg000_2192-7063' ' no hits & (original description: Putative PGSC0003DMG400019084, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00057990ctg000_3420-6649' ' no hits & (original description: Putative PGSC0003DMG400019084, Description = Putative ovule protein, PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben044scf00058134ctg001_2920-4721' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00058134ctg002_1039-4477' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00058134ctg005_6704-9042' ' no hits & (original description: Putative RPLP2, Description = 60S acidic ribosomal protein P2, PFAM = PF00428)' T '35.2' 'not assigned.unknown' 'niben044scf00058177ctg000_10156-13116' ' no hits & (original description: Putative NAC3, Description = NAC transcription factor, PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'niben044scf00058332ctg002_240-8155' '(at2g35610 : 674.0) xyloglucanase 113 (XEG113); CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT1G70630.1); Has 390 Blast hits to 386 proteins in 36 species: Archae - 0; Bacteria - 6; Metazoa - 3; Fungi - 0; Plants - 336; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 1348.0) & (original description: Putative LRD5, Description = Glycosyltransferase, PFAM = PF03407)' T '35.2' 'not assigned.unknown' 'niben044scf00058471ctg000_1424-10650' '(at5g62270 : 360.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: mucin-related (TAIR:AT2G02880.1). & (reliability: 720.0) & (original description: Putative At5g62270, Description = Gb}, PFAM = PF12298)' T '35.2' 'not assigned.unknown' 'niben044scf00058528ctg001_1-5966' '(at3g52610 : 247.0) unknown protein; Has 68 Blast hits to 67 proteins in 21 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 494.0) & (original description: Putative F383_11478, Description = Serpentine receptor class alpha-12, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00058598ctg004_1-3129' ' no hits & (original description: Putative PGSC0003DMG401027501, Description = Putative suppressor protein SRP40-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00058683ctg002_5343-7326' ' (original description: Putative samdc, Description = S-adenosylmethionine decarboxylase proenzyme, PFAM = PF08132)' T '35.2' 'not assigned.unknown' 'niben044scf00058761ctg002_4006-9671' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00058789ctg000_5634-7941' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Glutathione reductase, cytosolic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00058789ctg000_5705-8034' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Glutathione reductase, cytosolic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00059040ctg000_1-2730' '(at2g39740 : 126.0) Nucleotidyltransferase family protein; BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT3G45750.1); Has 1708 Blast hits to 1608 proteins in 227 species: Archae - 0; Bacteria - 13; Metazoa - 799; Fungi - 328; Plants - 255; Viruses - 0; Other Eukaryotes - 313 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative HESO1, Description = HEN1 suppressor 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00059064ctg001_1-2211' '(at3g14830 : 161.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53450.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative , Description = ATP-dependent helicase/nuclease subunit A, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00059134ctg001_322-3649' ' no hits & (original description: Putative arabinogalactan-protein: AGP, Description = Arabinogalactan-protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00059141ctg000_15538-18590' '(at3g01060 : 511.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1022.0) & (original description: Putative At3g01060, Description = Homoserine O-acetyltransferase isoform 4, PFAM = PF14234;PF14234)' T '35.2' 'not assigned.unknown' 'niben044scf00059141ctg000_18591-28917' '(at3g29280 : 156.0) unknown protein; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00059156ctg000_1714-6764' '(at3g29180 : 433.0) Protein of unknown function (DUF1336); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT5G39430.1). & (gnl|cdd|70520 : 284.0) no description available & (reliability: 866.0) & (original description: Putative CW14, Description = AT3G29180 protein, PFAM = PF07059)' T '35.2' 'not assigned.unknown' 'niben044scf00059302ctg001_1-6010' '(at3g22290 : 400.0) Endoplasmic reticulum vesicle transporter protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1692 (InterPro:IPR012936); BEST Arabidopsis thaliana protein match is: Endoplasmic reticulum vesicle transporter protein (TAIR:AT1G22200.1); Has 1158 Blast hits to 1071 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 384; Fungi - 263; Plants - 270; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink). & (gnl|cdd|37878 : 207.0) no description available & (gnl|cdd|87414 : 120.0) no description available & (reliability: 800.0) & (original description: Putative At3g22280, Description = Putative ovule protein, PFAM = PF07970;PF13850)' T '35.2' 'not assigned.unknown' 'niben044scf00059342ctg004_1-2546' '(at3g50430 : 130.0) unknown protein; Has 54 Blast hits to 54 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 29; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00059355ctg000_2857-6071' ' no hits & (original description: Putative TCM_045444, Description = Receptor-type tyrosine-protein phosphatase U, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00059356ctg000_2948-5645' ' no hits & (original description: Putative PGSC0003DMG400022309, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00059451ctg002_8535-11035' ' no hits & (original description: Putative PGSC0003DMG400008438, Description = , PFAM = PF00403)' T '35.2' 'not assigned.unknown' 'niben044scf00059563ctg000_2692-10006' '(at5g07170 : 86.3) Cell cycle regulated microtubule associated protein; CONTAINS InterPro DOMAIN/s: Cell cycle regulated microtubule associated protein (InterPro:IPR022021); BEST Arabidopsis thaliana protein match is: Cell cycle regulated microtubule associated protein (TAIR:AT5G62240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative PGSC0003DMG400031013, Description = , PFAM = PF12214)' T '35.2' 'not assigned.unknown' 'niben044scf00059685ctg000_13397-15468' ' (original description: Putative extA, Description = Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, PFAM = PF14547)' T '35.2' 'not assigned.unknown' 'niben044scf00059792ctg001_989-6030' '(at5g47740 : 157.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT2G45910.1). & (gnl|cdd|30176 : 88.0) no description available & (reliability: 314.0) & (original description: Putative BnaC02g33490D, Description = BnaC02g33490D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00060316ctg001_7140-17434' '(at3g22430 : 365.0) CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380); BEST Arabidopsis thaliana protein match is: XS domain-containing protein / XS zinc finger domain-containing protein-related (TAIR:AT5G23570.1); Has 565 Blast hits to 510 proteins in 121 species: Archae - 2; Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51; Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink). & (gnl|cdd|67105 : 94.2) no description available & (reliability: 730.0) & (original description: Putative BnaA05g17170D, Description = BnaA05g17170D protein, PFAM = PF03468)' T '35.2' 'not assigned.unknown' 'niben044scf00060348ctg001_2448-4903' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00060451ctg000_678-7091' '(at4g00440 : 202.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 1283 Blast hits to 1059 proteins in 155 species: Archae - 0; Bacteria - 77; Metazoa - 265; Fungi - 74; Plants - 239; Viruses - 0; Other Eukaryotes - 628 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative , Description = , PFAM = PF14309;PF12552)' T '35.2' 'not assigned.unknown' 'niben044scf00060476ctg002_1782-11094' ' no hits & (original description: Putative PGSC0003DMG400023471, Description = Single-stranded nucleic acid binding R3H protein, putative isoform 1, PFAM = PF01424;PF12752)' T '35.2' 'not assigned.unknown' 'niben044scf00060507ctg000_1-2074' '(at3g17950 : 85.1) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00060659ctg000_1266-4070' ' no hits & (original description: Putative , Description = , PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben044scf00060669ctg002_957-5551' '(gnl|cdd|86287 : 423.0) no description available & (at1g68390 : 400.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT1G68380.1); Has 622 Blast hits to 618 proteins in 34 species: Archae - 0; Bacteria - 10; Metazoa - 12; Fungi - 1; Plants - 563; Viruses - 9; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 800.0) & (original description: Putative Sb01g009220, Description = Putative uncharacterized protein Sb01g009220, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben044scf00060756ctg000_1-5924' '(gnl|cdd|69860 : 226.0) no description available & (at1g05070 : 194.0) Protein of unknown function (DUF1068); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1068 (InterPro:IPR010471); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1068) (TAIR:AT2G32580.1); Has 119 Blast hits to 119 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 116; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|37034 : 143.0) no description available & (reliability: 388.0) & (original description: Putative At1g05070, Description = At1g05070/T7A14_6, PFAM = PF06364)' T '35.2' 'not assigned.unknown' 'niben044scf00060927ctg000_1-953' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00060978ctg000_1-5079' ' no hits & (original description: Putative BnaC01g25020D, Description = BnaC01g25020D protein, PFAM = PF15938)' T '35.2' 'not assigned.unknown' 'niben044scf00061070ctg001_1-8966' '(at5g66420 : 875.0) LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP033271 (InterPro:IPR008322), TIM-barrel signal transduction protein, predicted (InterPro:IPR009215); Has 1232 Blast hits to 1230 proteins in 311 species: Archae - 18; Bacteria - 959; Metazoa - 1; Fungi - 84; Plants - 42; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|87915 : 435.0) no description available & (reliability: 1750.0) & (original description: Putative NCU00864, Description = TIM-barrel enzyme family protein, PFAM = PF06792;PF09370)' T '35.2' 'not assigned.unknown' 'niben044scf00061294ctg000_7578-10519' '(at5g10750 : 390.0) Protein of unknown function (DUF1336); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT5G24990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70520 : 234.0) no description available & (reliability: 780.0) & (original description: Putative EDR2, Description = Predicted protein, PFAM = PF07059)' T '35.2' 'not assigned.unknown' 'niben044scf00061367ctg000_1198-4787' ' no hits & (original description: Putative PGSC0003DMG400040190, Description = Gb:AAC24089.1, PFAM = PF05078)' T '35.2' 'not assigned.unknown' 'niben044scf00061416ctg001_1-1227' ' no hits & (original description: Putative , Description = Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, PFAM = PF14368)' T '35.2' 'not assigned.unknown' 'niben044scf00061449ctg000_1-7940' '(at4g32910 : 546.0) CONTAINS InterPro DOMAIN/s: Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro:IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87313 : 259.0) no description available & (gnl|cdd|37482 : 221.0) no description available & (reliability: 1092.0) & (original description: Putative NUP75, Description = Nuclear pore complex protein NUP75, PFAM = PF07575)' T '35.2' 'not assigned.unknown' 'niben044scf00061450ctg000_1-3390' '(at1g79200 : 91.3) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative PGSC0003DMG400030526, Description = Epstein-Barr virus EBNA-1-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben044scf00061755ctg001_1706-4788' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00062008ctg002_165-4566' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben044scf00062249ctg000_15155-20233' '(at1g19690 : 262.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); Has 3422 Blast hits to 3422 proteins in 1044 species: Archae - 54; Bacteria - 2233; Metazoa - 3; Fungi - 5; Plants - 67; Viruses - 4; Other Eukaryotes - 1056 (source: NCBI BLink). & (gnl|cdd|35966 : 131.0) no description available & (reliability: 524.0) & (original description: Putative At1g19691, Description = Putative uncharacterized protein At1g19691, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101ctg02807_1-567' '(at5g15900 : 125.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 19 (TBL19); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 21 (TAIR:AT5G15890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|72785 : 82.7) no description available & (reliability: 250.0) & (original description: Putative AXY4L, Description = Putative C7orf58, PFAM = PF13839)' T '35.2' 'not assigned.unknown' 'niben101ctg02885_1-569' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101ctg05070_1-648' ' no hits & (original description: Putative , Description = , PFAM = PF12776)' T '35.2' 'not assigned.unknown' 'niben101ctg06858_1-739' '(at5g16250 : 223.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative BnaA10g18070D, Description = BnaA10g18070D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101ctg07687_1-798' ' no hits & (original description: Putative , Description = Pol polyprotein, PFAM = PF00665)' T '35.2' 'not assigned.unknown' 'niben101ctg09243_1-937' ' no hits & (original description: Putative PGSC0003DMG400006404, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101ctg09839_1-1003' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101ctg10271_1-1065' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101ctg10524_1-1104' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101ctg10654_1-1125' ' no hits & (original description: Putative At3g13310, Description = At3g13310, PFAM = PF00226)' T '35.2' 'not assigned.unknown' 'niben101ctg10798_1-1145' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101ctg10829_1-1156' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101ctg10966_1-1180' ' no hits & (original description: Putative PGSC0003DMG400007671, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101ctg11347_1-1255' ' no hits & (original description: Putative At5g47420, Description = DNA topoisomerase 4 subunit B, PFAM = PF01987)' T '35.2' 'not assigned.unknown' 'niben101ctg11727_1-1351' ' no hits & (original description: Putative BnaCnng39790D, Description = BnaA02g21910D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101ctg11819_53-1367' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101ctg12256_21-1483' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101ctg12832_1-1644' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101ctg12991_1-1750' '(at2g32980 : 169.0) unknown protein; Has 158 Blast hits to 154 proteins in 73 species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative 37469, Description = AUGMIN subunit 2, PFAM = PF15003)' T '35.2' 'not assigned.unknown' 'niben101ctg12995_1-1755' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101ctg13404_673-1936' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101ctg13555_1-2028' ' no hits & (original description: Putative PGSC0003DMG400009028, Description = , PFAM = PF11250)' T '35.2' 'not assigned.unknown' 'niben101ctg14032_1-1977' '(at2g34070 : 112.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 37 (TBL37); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 38 (TAIR:AT1G29050.1); Has 1344 Blast hits to 1324 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1342; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 103.0) no description available & (reliability: 224.0) & (original description: Putative gal2, Description = PC-Esterase, PFAM = PF13839)' T '35.2' 'not assigned.unknown' 'niben101ctg14046_1-1527' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101ctg14480_1-2692' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101ctg14682_990-2875' ' no hits & (original description: Putative BnaC03g75130D, Description = BnaC03g75130D protein, PFAM = PF11493)' T '35.2' 'not assigned.unknown' 'niben101ctg14729_1-2698' '(at5g07330 : 109.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G63060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative BnaC09g48550D, Description = BnaC09g48550D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101ctg14932_173-2409' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101ctg15311_1881-3808' '(at5g43050 : 191.0) Chloroplast localized YCF20-like gene involved in nonphotochemical quenching. Has overlapping functions with npq7; NONPHOTOCHEMICAL QUENCHING 6 (NPQ6); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF565 (InterPro:IPR007572); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative NPQ6, Description = At5g43050, PFAM = PF04483)' T '35.2' 'not assigned.unknown' 'niben101ctg15352_1301-3944' '(at2g43795 : 98.2) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G59800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative B9008, Description = Calcium-binding EF-hand, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101ctg15619_1843-4566' '(gnl|cdd|66742 : 123.0) no description available & (at4g35690 : 117.0) Arabidopsis protein of unknown function (DUF241); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT4G35710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative PGSC0003DMG400001539, Description = , PFAM = PF03087)' T '35.2' 'not assigned.unknown' 'niben101ctg15628_1-2593' ' no hits & (original description: Putative PGSC0003DMG400033835, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101ctg15751_658-4804' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101ctg15793_20-3066' '(at5g59350 : 153.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative BnaC02g10010D, Description = BnaC02g10010D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101ctg15829_945-5291' ' no hits & (original description: Putative TCM_034726, Description = Glycosyl hydrolase family 35 protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101ctg15832_3527-5353' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101ctg15853_4036-5484' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'niben101ctg15954_1-3085' ' no hits & (original description: Putative , Description = , PFAM = PF00646;PF07734)' T '35.2' 'not assigned.unknown' 'niben101ctg15956_2168-4820' ' no hits & (original description: Putative , Description = , PFAM = PF10950)' T '35.2' 'not assigned.unknown' 'niben101ctg16070_499-5781' '(gnl|cdd|69860 : 143.0) no description available & (at2g32580 : 120.0) Protein of unknown function (DUF1068); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1068 (InterPro:IPR010471); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1068) (TAIR:AT1G05070.1). & (gnl|cdd|37034 : 80.4) no description available & (reliability: 240.0) & (original description: Putative F383_27242, Description = Gamma-glutamyl hydrolase, PFAM = PF06364)' T '35.2' 'not assigned.unknown' 'niben101ctg16206_2598-6668' '(gnl|cdd|71235 : 143.0) no description available & (at2g28690 : 140.0) Protein of unknown function (DUF1635); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1635 (InterPro:IPR012862); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1635) (TAIR:AT5G59760.1); Has 114 Blast hits to 114 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative At2g28690, Description = BnaA07g14070D protein, PFAM = PF07795)' T '35.2' 'not assigned.unknown' 'niben101ctg16211_305-3921' ' no hits & (original description: Putative , Description = , PFAM = PF04640)' T '35.2' 'not assigned.unknown' 'niben101ctg16253_825-7326' ' no hits & (original description: Putative dss1, Description = DSS1/SEM1-like protein, PFAM = PF05160)' T '35.2' 'not assigned.unknown' 'niben101ctg16284_4988-8255' ' no hits & (original description: Putative , Description = , PFAM = PF14383)' T '35.2' 'not assigned.unknown' 'niben101ctg16318_64-3983' '(gnl|cdd|86287 : 414.0) no description available & (at1g10280 : 407.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT3G21310.1); Has 584 Blast hits to 584 proteins in 19 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 556; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 814.0) & (original description: Putative At1g10280, Description = At1g10280, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben101ctg16407_7719-10216' ' no hits & (original description: Putative PGSC0003DMG400002972, Description = , PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101ctg16413_4082-8104' '(at3g18180 : 388.0) Glycosyltransferase family 61 protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Glycosyltransferase AER61, uncharacterised (InterPro:IPR007657); BEST Arabidopsis thaliana protein match is: Glycosyltransferase family 61 protein (TAIR:AT3G18170.1); Has 763 Blast hits to 763 proteins in 164 species: Archae - 0; Bacteria - 23; Metazoa - 306; Fungi - 8; Plants - 399; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|39896 : 335.0) no description available & (gnl|cdd|68160 : 260.0) no description available & (reliability: 776.0) & (original description: Putative hga7, Description = Glycosyltransferase, HGA-like, putative,expressed, PFAM = PF04577)' T '35.2' 'not assigned.unknown' 'niben101ctg16502_1-9313' ' no hits & (original description: Putative SOC1, Description = MADS-box transcription factor, PFAM = PF01486)' T '35.2' 'not assigned.unknown' 'niben101scf00005_141291-153581' '(at4g36630 : 671.0) EMBRYO DEFECTIVE 2754 (EMB2754); FUNCTIONS IN: small GTPase regulator activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Citron-like (InterPro:IPR001180), Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1 (InterPro:IPR019452), Armadillo-type fold (InterPro:IPR016024), Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2 (InterPro:IPR019453); Has 871 Blast hits to 660 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 376; Fungi - 292; Plants - 87; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). & (gnl|cdd|37274 : 420.0) no description available & (reliability: 1342.0) & (original description: Putative BnaA08g15330D, Description = BnaA08g15330D protein, PFAM = PF00637;PF00780;PF10366;PF10367)' T '35.2' 'not assigned.unknown' 'niben101scf00006_59421-61960' ' no hits & (original description: Putative , Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00010_159037-162233' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00011_81445-85675' ' no hits & (original description: Putative Sb01g021220, Description = Putative uncharacterized protein Sb01g021220, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00011_107788-110117' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00012_14237-17781' '(at5g24860 : 112.0) encodes a small protein of 12.6 kDa that regulates flowering and is involved in gibberellin signalling pathway. It is expressed in apical meristems immediately after the photoperiodic induction of flowering. Genetic interactions with flowering time and floral organ identity genes suggest that this gene may be involved in modulating the competence to flower. There are two other genes similar to FPF1, FLP1 (At4g31380) and FLP2 (no locus name yet, on BAC F8F16 on chr 4). This is so far a plant-specific gene and is only found in long-day mustard, arabidopsis, and rice.; FLOWERING PROMOTING FACTOR 1 (FPF1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to gibberellin stimulus, positive regulation of flower development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10625.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative FPF1, Description = Flowering-promoting factor 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00012_123114-125947' ' no hits & (original description: Putative KK1_033282, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223;PF00098)' T '35.2' 'not assigned.unknown' 'niben101scf00015_433795-441948' '(at2g41945 : 220.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18250.1); Has 57 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative BnaC03g23560D, Description = BnaC03g23560D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00015_515216-528851' '(at3g58050 : 793.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41960.1); Has 13384 Blast hits to 8116 proteins in 546 species: Archae - 41; Bacteria - 766; Metazoa - 5596; Fungi - 1431; Plants - 589; Viruses - 46; Other Eukaryotes - 4915 (source: NCBI BLink). & (reliability: 1586.0) & (original description: Putative At2g41960, Description = Putative uncharacterized protein At2g41960, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00016_268177-270809' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00016_476588-481938' '(at1g71940 : 364.0) SNARE associated Golgi protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT4G09580.1). & (gnl|cdd|38350 : 238.0) no description available & (reliability: 728.0) & (original description: Putative gtk16, Description = Gtk16 protein, PFAM = PF09335)' T '35.2' 'not assigned.unknown' 'niben101scf00021_48074-53164' ' no hits & (original description: Putative rpl32, Description = Ribosomal protein L32, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00022_1-3341' '(atmg00520 : 1090.0) hypothetical protein; MATR; FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity; INVOLVED IN: RNA-dependent DNA replication, RNA splicing; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Intron maturase, type II (InterPro:IPR000442), RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477); BEST Arabidopsis thaliana protein match is: Intron maturase, type II family protein (TAIR:AT1G74350.1). & (gnl|cdd|39965 : 680.0) no description available & (gnl|cdd|73157 : 107.0) no description available & (reliability: 2180.0) & (original description: Putative matR, Description = Maturase, PFAM = PF01348)' T '35.2' 'not assigned.unknown' 'niben101scf00022_3342-5442' ' no hits & (original description: Putative orf171a, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00022_655503-678066' '(at2g26340 : 165.0) unknown protein. & (reliability: 330.0) & (original description: Putative , Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00022_927758-937063' '(at2g06040 : 423.0) CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT5G21900.1); Has 5028 Blast hits to 2547 proteins in 240 species: Archae - 0; Bacteria - 125; Metazoa - 2326; Fungi - 765; Plants - 1373; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink). & (gnl|cdd|37158 : 94.8) no description available & (reliability: 846.0) & (original description: Putative , Description = Rad7, putative, PFAM = PF13516;PF13516;PF13516)' T '35.2' 'not assigned.unknown' 'niben101scf00022_936344-938762' ' no hits & (original description: Putative PGSC0003DMG400045083, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00023_230864-239101' '(at2g30530 : 247.0) unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01970.1); Has 5513 Blast hits to 872 proteins in 154 species: Archae - 0; Bacteria - 30; Metazoa - 615; Fungi - 144; Plants - 149; Viruses - 12; Other Eukaryotes - 4563 (source: NCBI BLink). & (reliability: 494.0) & (original description: Putative BnaA03g14040D, Description = BnaA03g14040D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00023_392402-394815' ' no hits & (original description: Putative PGSC0003DMG400022310, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00024_33480-47454' '(at1g74830 : 361.0) Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT1G18990.1); Has 3601 Blast hits to 3088 proteins in 462 species: Archae - 26; Bacteria - 544; Metazoa - 962; Fungi - 241; Plants - 560; Viruses - 41; Other Eukaryotes - 1227 (source: NCBI BLink). & (gnl|cdd|68159 : 125.0) no description available & (reliability: 722.0) & (original description: Putative MYOB6, Description = Probable myosin-binding protein 6, PFAM = PF04576)' T '35.2' 'not assigned.unknown' 'niben101scf00028_351945-354316' '(gnl|cdd|71349 : 121.0) no description available & (at3g22540 : 116.0) Protein of unknown function (DUF1677); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1677, plant (InterPro:IPR012876); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1677) (TAIR:AT4G14819.1); Has 245 Blast hits to 245 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 245; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative , Description = , PFAM = PF07911)' T '35.2' 'not assigned.unknown' 'niben101scf00028_498395-516745' '(at1g05410 : 407.0) Protein of unknown function (DUF1423); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423, plant (InterPro:IPR004082); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 814.0) & (original description: Putative RCOM_0911900, Description = Protein binding protein, putative, PFAM = PF07227)' T '35.2' 'not assigned.unknown' 'niben101scf00031_4495-55140' ' (original description: Putative murA2, Description = UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2, PFAM = PF00275)' T '35.2' 'not assigned.unknown' 'niben101scf00031_4546-13702' ' (original description: Putative murA, Description = UDP-N-acetylglucosamine 1-carboxyvinyltransferase, PFAM = PF00275)' T '35.2' 'not assigned.unknown' 'niben101scf00031_252234-258375' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00033_500784-503158' ' (original description: Putative PGSC0003DMG400014084, Description = ABI five-binding protein, PFAM = PF16135)' T '35.2' 'not assigned.unknown' 'niben101scf00033_759666-761872' '(at3g27030 : 93.6) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3339 (InterPro:IPR021775); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF 3339) (TAIR:AT5G40970.1); Has 538 Blast hits to 271 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 534; Viruses - 4; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative BnaC02g36610D, Description = BnaC02g36610D protein, PFAM = PF11820)' T '35.2' 'not assigned.unknown' 'niben101scf00033_765753-769876' ' no hits & (original description: Putative Os05g0103400, Description = Os05g0103400 protein, PFAM = PF11820)' T '35.2' 'not assigned.unknown' 'niben101scf00033_787494-791920' ' no hits & (original description: Putative Os05g0517800, Description = Os05g0517800 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00034_111943-115417' ' no hits & (original description: Putative PGSC0003DMG400013104, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00034_473061-477514' ' no hits & (original description: Putative BnaA01g00860D, Description = BnaA01g00860D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00037_82101-84524' ' no hits & (original description: Putative PGSC0003DMG400014888, Description = RNase H family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00037_192777-200134' '(at5g06830 : 578.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF773 (InterPro:IPR008491); Has 365 Blast hits to 359 proteins in 109 species: Archae - 9; Bacteria - 13; Metazoa - 209; Fungi - 7; Plants - 47; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|69140 : 433.0) no description available & (gnl|cdd|37818 : 382.0) no description available & (reliability: 1156.0) & (original description: Putative At5g06830, Description = CDK5RAP3-like protein, PFAM = PF05600)' T '35.2' 'not assigned.unknown' 'niben101scf00043_253621-256230' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00043_349135-353101' '(at1g54680 : 184.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27290.1). & (reliability: 368.0) & (original description: Putative At1g54680, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00043_415571-418017' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00043_415592-418082' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00044_116302-125007' '(at3g50430 : 140.0) unknown protein; Has 54 Blast hits to 54 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 29; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative , Description = , PFAM = PF14695;PF14694)' T '35.2' 'not assigned.unknown' 'niben101scf00046_97488-102358' '(at3g63170 : 136.0) Chalcone-flavanone isomerase family protein; FUNCTIONS IN: intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT2G26310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative CHI, Description = Chalcone isomerase, PFAM = PF16036)' T '35.2' 'not assigned.unknown' 'niben101scf00046_325328-327783' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00046_408888-418273' '(at3g27460 : 331.0) SGF29 tudor-like domain; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: SAGA-associated factor 29 (InterPro:IPR010750); BEST Arabidopsis thaliana protein match is: SGF29 tudor-like domain (TAIR:AT5G40550.2); Has 324 Blast hits to 324 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 113; Plants - 51; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|38248 : 200.0) no description available & (gnl|cdd|70501 : 172.0) no description available & (reliability: 662.0) & (original description: Putative At5g40550, Description = At5g40550, PFAM = PF07039)' T '35.2' 'not assigned.unknown' 'niben101scf00046_436893-444074' '(at1g67850 : 545.0) Protein of unknown function (DUF707); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G13000.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68772 : 530.0) no description available & (reliability: 1090.0) & (original description: Putative LOC100273084, Description = Lysine ketoglutarate reductase trans-splicing related 1, PFAM = PF05212)' T '35.2' 'not assigned.unknown' 'niben101scf00046_611828-614466' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00046_749304-752948' ' no hits & (original description: Putative PGSC0003DMG400012643, Description = , PFAM = PF02362)' T '35.2' 'not assigned.unknown' 'niben101scf00046_757171-760772' ' (original description: Putative NOI, Description = RPM1-interacting protein 4 (RIN4) family protein isoform 2, PFAM = PF05627)' T '35.2' 'not assigned.unknown' 'niben101scf00046_856208-862453' '(at3g27350 : 105.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40700.1). & (reliability: 210.0) & (original description: Putative PGSC0003DMG400012646, Description = BnaA02g28870D protein, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'niben101scf00046_985755-991414' '(at5g14310 : 618.0) carboxyesterase 16 (CXE16); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36728 : 261.0) no description available & (gnl|cdd|87389 : 176.0) no description available & (q6l545|gid1_orysa : 132.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 1236.0) & (original description: Putative CXE16, Description = Probable carboxylesterase 16, PFAM = PF07859)' T '35.2' 'not assigned.unknown' 'niben101scf00047_188387-194763' '(at5g44670 : 598.0) Domain of unknown function (DUF23); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF23) (TAIR:AT4G20170.1); Has 204 Blast hits to 204 proteins in 35 species: Archae - 0; Bacteria - 27; Metazoa - 39; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|85620 : 108.0) no description available & (gnl|cdd|39932 : 96.8) no description available & (reliability: 1196.0) & (original description: Putative GALS2, Description = Galactan beta-1,4-galactosyltransferase GALS2, PFAM = PF01697)' T '35.2' 'not assigned.unknown' 'niben101scf00047_285249-292773' '(at1g14780 : 481.0) MAC/Perforin domain-containing protein; CONTAINS InterPro DOMAIN/s: Membrane attack complex component/perforin (MACPF) domain (InterPro:IPR020864); BEST Arabidopsis thaliana protein match is: MAC/Perforin domain-containing protein (TAIR:AT4G24290.2); Has 221 Blast hits to 220 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 0; Plants - 202; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 962.0) & (original description: Putative At4g24290, Description = MACPF domain-containing protein At4g24290, PFAM = PF01823)' T '35.2' 'not assigned.unknown' 'niben101scf00047_350307-353892' '(at1g10800 : 83.6) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; Has 23 Blast hits to 23 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative BnaC05g08280D, Description = BnaC05g08280D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00050_70333-72872' ' no hits & (original description: Putative KK1_049234, Description = Retrotransposable element Tf2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00050_354731-358644' '(at4g35930 : 271.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G61340.1); Has 94 Blast hits to 94 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 542.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00050_443506-453158' '(at4g35920 : 522.0) Encodes an integral plasma membrane protein. Functionally complements the yeast mid1 mutant, a deficiency of Ca2+ influx. Involved in Ca2+ influx and mechanical sensing in roots. An over-expression line showed increased Ca2+ uptake than the wild type plant. The primary root of a knock-out mutant failed to penetrate a harder agar medium from a softer medium.; mid1-complementing activity 1 (MCA1); CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT2G17780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86720 : 94.2) no description available & (reliability: 1044.0) & (original description: Putative MCA1, Description = Protein MID1-COMPLEMENTING ACTIVITY 1, PFAM = PF04749)' T '35.2' 'not assigned.unknown' 'niben101scf00050_459614-463196' '(at4g35905 : 95.9) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF343 (InterPro:IPR005651); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative PGSC0003DMG400022552, Description = , PFAM = PF03966)' T '35.2' 'not assigned.unknown' 'niben101scf00051_252658-255038' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00051_453128-455505' '(at4g04630 : 121.0) Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT4G21970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68105 : 116.0) no description available & (reliability: 242.0) & (original description: Putative PGSC0003DMG400016480, Description = At4g26950, PFAM = PF04520)' T '35.2' 'not assigned.unknown' 'niben101scf00054_36697-41815' '(at5g37480 : 104.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative PGSC0003DMG400028217, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00055_76249-78962' ' no hits & (original description: Putative cbp20, Description = 20 kD nuclear cap binding protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00055_337771-342998' '(at1g75180 : 331.0) Erythronate-4-phosphate dehydrogenase family protein; BEST Arabidopsis thaliana protein match is: Erythronate-4-phosphate dehydrogenase family protein (TAIR:AT1G19400.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 662.0) & (original description: Putative BnaA06g13540D, Description = BnaA06g13540D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00056_1014563-1017010' ' no hits & (original description: Putative , Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf00056_1070828-1077461' ' no hits & (original description: Putative BnaC03g12260D, Description = BnaC03g12260D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00056_1074514-1076973' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00058_33533-43795' '(at3g01780 : 1789.0) Encodes TPLATE, a cytokinesis protein targeted to the cell plate. Functions in vesicle-trafficking events required for site-specific cell wall modifications during pollen germination and for anchoring of the cell plate to the mother wall at the correct cortical position.; TPLATE; FUNCTIONS IN: binding; INVOLVED IN: pollen development, cytokinesis; LOCATED IN: nucleus, plasma membrane, cell plate, cytoplasm, phragmoplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 18574 Blast hits to 8761 proteins in 652 species: Archae - 63; Bacteria - 685; Metazoa - 7555; Fungi - 1758; Plants - 703; Viruses - 446; Other Eukaryotes - 7364 (source: NCBI BLink). & (reliability: 3578.0) & (original description: Putative TPLATE, Description = Protein TPLATE, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00058_41235-43652' '(at3g01780 : 188.0) Encodes TPLATE, a cytokinesis protein targeted to the cell plate. Functions in vesicle-trafficking events required for site-specific cell wall modifications during pollen germination and for anchoring of the cell plate to the mother wall at the correct cortical position.; TPLATE; FUNCTIONS IN: binding; INVOLVED IN: pollen development, cytokinesis; LOCATED IN: nucleus, plasma membrane, cell plate, cytoplasm, phragmoplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 18574 Blast hits to 8761 proteins in 652 species: Archae - 63; Bacteria - 685; Metazoa - 7555; Fungi - 1758; Plants - 703; Viruses - 446; Other Eukaryotes - 7364 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative T22, Description = BnaA03g27300D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00058_183081-185608' ' no hits & (original description: Putative , Description = , PFAM = PF15365)' T '35.2' 'not assigned.unknown' 'niben101scf00058_548663-551590' ' no hits & (original description: Putative , Description = , PFAM = PF08284)' T '35.2' 'not assigned.unknown' 'niben101scf00058_846691-857509' '(at3g22430 : 369.0) CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380); BEST Arabidopsis thaliana protein match is: XS domain-containing protein / XS zinc finger domain-containing protein-related (TAIR:AT5G23570.1); Has 565 Blast hits to 510 proteins in 121 species: Archae - 2; Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51; Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink). & (gnl|cdd|67105 : 88.8) no description available & (reliability: 738.0) & (original description: Putative BnaA05g17170D, Description = BnaA05g17170D protein, PFAM = PF03468)' T '35.2' 'not assigned.unknown' 'niben101scf00059_401611-410750' '(at3g53540 : 312.0) unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3741) (TAIR:AT4G28760.2); Has 1710 Blast hits to 868 proteins in 206 species: Archae - 2; Bacteria - 409; Metazoa - 304; Fungi - 204; Plants - 304; Viruses - 2; Other Eukaryotes - 485 (source: NCBI BLink). & (reliability: 624.0) & (original description: Putative , Description = , PFAM = PF12552;PF14383;PF14309)' T '35.2' 'not assigned.unknown' 'niben101scf00063_405475-450472' '(at5g61340 : 126.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative BnaA03g40120D, Description = BnaA03g40120D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00063_444405-447385' '(at5g61340 : 149.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative BnaA03g40120D, Description = BnaA03g40120D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00063_648466-651053' '(at4g34215 : 300.0) Encodes a member of the SGNH-hydrolase superfamily of enzymes. The enzymes of the SGNH-hydrolase superfamily facilitate the hydrolysis of ester, thioester and amide bonds in a range of substrates including complex polysaccharides, lysophospholipids, acyl-CoA esters and other compounds.; Domain of unknown function (DUF303) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF303, acetylesterase putative (InterPro:IPR005181); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF303) (TAIR:AT3G53010.1); Has 345 Blast hits to 345 proteins in 104 species: Archae - 2; Bacteria - 231; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|86388 : 89.6) no description available & (reliability: 600.0) & (original description: Putative At4g34215, Description = Probable carbohydrate esterase At4g34215, PFAM = PF03629)' T '35.2' 'not assigned.unknown' 'niben101scf00063_1261964-1264439' ' no hits & (original description: Putative PGSC0003DMG400019509, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00063_1383425-1385844' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Putative RNA-directed DNA polymerase (Reverse transcriptase), PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00063_1408067-1410585' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00064_184848-187812' '(at4g33925 : 175.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; Has 106 Blast hits to 106 proteins in 53 species: Archae - 8; Bacteria - 0; Metazoa - 47; Fungi - 2; Plants - 36; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative At4g33925, Description = At4g33925, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00066_67849-70205' ' no hits & (original description: Putative , Description = , PFAM = PF08137)' T '35.2' 'not assigned.unknown' 'niben101scf00068_41828-45730' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00069_24807-30005' '(at4g02425 : 134.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 29 Blast hits to 28 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00069_424725-436206' ' no hits & (original description: Putative PGSC0003DMG400016686, Description = SPT2 chromatin protein, putative isoform 1, PFAM = PF08243)' T '35.2' 'not assigned.unknown' 'niben101scf00069_689221-692040' ' no hits & (original description: Putative KK1_012680, Description = Uncharacterized protein At5g65660 family, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00069_1189625-1192314' '(at2g16030 : 191.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G26730.1); Has 270 Blast hits to 270 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 250; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative At2g16030, Description = Putative uncharacterized protein At2g16030, PFAM = PF08241)' T '35.2' 'not assigned.unknown' 'niben101scf00069_1310444-1314321' '(at1g70780 : 128.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 143 Blast hits to 143 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative BnaC08g06180D, Description = BnaC08g06180D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00069_1339067-1341627' '(at1g70780 : 132.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 143 Blast hits to 143 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative BnaC08g06180D, Description = BnaC08g06180D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00072_53922-56527' '(at5g12340 : 168.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative , Description = , PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf00072_1154430-1161414' '(at5g55610 : 255.0) unknown protein; LOCATED IN: mitochondrion, plastid, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 510.0) & (original description: Putative At5g55610, Description = Putative uncharacterized protein At5g55610, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00073_392205-396744' '(at1g17030 : 655.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G47010.2); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 1310.0) & (original description: Putative At2g47010, Description = At2g47010/F14M4.16, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00073_678007-680584' ' no hits & (original description: Putative , Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf00073_783859-787163' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00074_79811-82581' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00077_4722-7378' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf00077_921496-932998' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00083_217463-221381' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00083_409883-413561' '(at4g35905 : 97.1) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF343 (InterPro:IPR005651); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative PGSC0003DMG400022552, Description = , PFAM = PF03966)' T '35.2' 'not assigned.unknown' 'niben101scf00083_589832-592077' ' no hits & (original description: Putative , Description = , PFAM = PF08137)' T '35.2' 'not assigned.unknown' 'niben101scf00085_90978-95014' ' (original description: Putative RPP2D, Description = 60S acidic ribosomal protein P2-4, PFAM = PF00428)' T '35.2' 'not assigned.unknown' 'niben101scf00088_23980-147060' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00088_94742-97146' ' no hits & (original description: Putative PGSC0003DMG400021122, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00088_164733-170835' '(at3g29130 : 152.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Domain of unknown function KxDL (InterPro:IPR019371). & (reliability: 304.0) & (original description: Putative , Description = , PFAM = PF10241)' T '35.2' 'not assigned.unknown' 'niben101scf00090_177785-186996' '(at5g42920 : 731.0) Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.; THO5; CONTAINS InterPro DOMAIN/s: THO complex, subunit 5 (InterPro:IPR019163); BEST Arabidopsis thaliana protein match is: THO complex, subunit 5 (TAIR:AT1G45233.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37427 : 252.0) no description available & (reliability: 1462.0) & (original description: Putative THO5B, Description = THO complex subunit 5B, PFAM = PF09766)' T '35.2' 'not assigned.unknown' 'niben101scf00090_433736-437667' '(at5g42900 : 87.8) cold regulated gene 27; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G33980.1); Has 74 Blast hits to 74 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00090_845521-850631' '(at2g26570 : 433.0) Encodes a coiled-coil protein WEB1 (weak chloroplast movement under blue light 1). WEB1, together with another coiled-coil protein WEB2/PMI2 (At1g66840), maintains the chloroplast photorelocation movement velocity.; Plant protein of unknown function (DUF827); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT4G33390.1); Has 151476 Blast hits to 77886 proteins in 3477 species: Archae - 2093; Bacteria - 37732; Metazoa - 61062; Fungi - 12741; Plants - 9509; Viruses - 541; Other Eukaryotes - 27798 (source: NCBI BLink). & (gnl|cdd|72811 : 119.0) no description available & (reliability: 866.0) & (original description: Putative BnaC07g44220D, Description = BnaC07g44220D protein, PFAM = PF05701)' T '35.2' 'not assigned.unknown' 'niben101scf00090_1319846-1321858' ' no hits & (original description: Putative orf160, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00090_1321859-1323702' ' no hits & (original description: Putative orf101, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00091_117901-121910' '(at1g75180 : 308.0) Erythronate-4-phosphate dehydrogenase family protein; BEST Arabidopsis thaliana protein match is: Erythronate-4-phosphate dehydrogenase family protein (TAIR:AT1G19400.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 616.0) & (original description: Putative RCOM_1675110, Description = 2-hydroxyacid dehydrogenase, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00094_84299-88022' ' (original description: Putative pr10, Description = Pathogenesis-related protein 10, PFAM = PF00407)' T '35.2' 'not assigned.unknown' 'niben101scf00094_330662-344557' '(at4g16146 : 100.0) cAMP-regulated phosphoprotein 19-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: cAMP-regulated phosphoprotein/endosulphine conserved region (InterPro:IPR006760); BEST Arabidopsis thaliana protein match is: cAMP-regulated phosphoprotein 19-related protein (TAIR:AT1G69510.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71283 : 87.5) no description available & (reliability: 200.0) & (original description: Putative glysoja_029435, Description = cAMP-regulated phosphoprotein-like protein, PFAM = PF04667)' T '35.2' 'not assigned.unknown' 'niben101scf00095_68007-81687' ' no hits & (original description: Putative , Description = , PFAM = PF14383)' T '35.2' 'not assigned.unknown' 'niben101scf00095_881307-888093' '(at3g07660 : 271.0) Kinase-related protein of unknown function (DUF1296); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1296 (InterPro:IPR009719); BEST Arabidopsis thaliana protein match is: Kinase-related protein of unknown function (DUF1296) (TAIR:AT3G13990.1); Has 3086 Blast hits to 1914 proteins in 327 species: Archae - 2; Bacteria - 372; Metazoa - 1089; Fungi - 466; Plants - 245; Viruses - 13; Other Eukaryotes - 899 (source: NCBI BLink). & (reliability: 542.0) & (original description: Putative glysoja_009409, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00096_331122-336509' '(at3g58010 : 300.0) plastoglobulin 34kD (PGL34); FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: Plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT2G42130.4); Has 158 Blast hits to 158 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 6; Plants - 145; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 600.0) & (original description: Putative PAP13, Description = Probable plastid-lipid-associated protein 13, chloroplastic, PFAM = PF04755)' T '35.2' 'not assigned.unknown' 'niben101scf00096_562639-566476' '(at2g42040 : 82.8) CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 219 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative MTR_7g093350, Description = WRC protein, PFAM = PF08879)' T '35.2' 'not assigned.unknown' 'niben101scf00099_13138-26724' '(at1g08480 : 186.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane, plastid, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative SDH6, Description = Succinate dehydrogenase subunit 6, mitochondrial, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00099_128653-131000' ' no hits & (original description: Putative PGSC0003DMG400041004, Description = Gag-pro-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00099_175273-177749' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00103_350913-363332' '(at3g51610 : 327.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 53 Blast hits to 53 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 654.0) & (original description: Putative Sb09g005000, Description = Putative uncharacterized protein Sb09g005000, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00103_419347-433248' '(at3g51620 : 609.0) PAP/OAS1 substrate-binding domain superfamily; BEST Arabidopsis thaliana protein match is: nucleotidyltransferases (TAIR:AT3G61690.1); Has 386 Blast hits to 356 proteins in 104 species: Archae - 0; Bacteria - 4; Metazoa - 102; Fungi - 40; Plants - 181; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|37117 : 196.0) no description available & (reliability: 1218.0) & (original description: Putative pco079591, Description = Poly(A) RNA polymerase cid14, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00103_506915-545422' '(at2g38500 : 149.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Has 51 Blast hits to 51 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00104_459923-464163' '(at3g63270 : 556.0) CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: PIF / Ping-Pong family of plant transposases (TAIR:AT3G55350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39785 : 219.0) no description available & (reliability: 1112.0) & (original description: Putative At3g63270, Description = Putative uncharacterized protein At3g63270, PFAM = PF13359)' T '35.2' 'not assigned.unknown' 'niben101scf00108_142826-146609' ' no hits & (original description: Putative GNC, Description = GATA transcription factor 16, PFAM = PF00320)' T '35.2' 'not assigned.unknown' 'niben101scf00108_387586-430395' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00109_230180-232875' ' no hits & (original description: Putative KNU, Description = Zinc finger protein 4, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00109_502816-505190' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00109_515766-523316' '(at3g26990 : 218.0) ENTH/VHS family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT5G65180.1); Has 1003 Blast hits to 995 proteins in 197 species: Archae - 0; Bacteria - 21; Metazoa - 515; Fungi - 219; Plants - 159; Viruses - 1; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|68393 : 94.1) no description available & (gnl|cdd|37880 : 93.5) no description available & (reliability: 436.0) & (original description: Putative At3g26990, Description = Regulation of nuclear pre-mRNA domain-containing protein 1B, PFAM = PF04818)' T '35.2' 'not assigned.unknown' 'niben101scf00109_702215-710392' '(at3g01810 : 498.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2). & (reliability: 996.0) & (original description: Putative BnaC04g02610D, Description = BnaC04g02610D protein, PFAM = PF10358)' T '35.2' 'not assigned.unknown' 'niben101scf00109_1094416-1096625' '(at3g27030 : 86.7) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3339 (InterPro:IPR021775); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF 3339) (TAIR:AT5G40970.1); Has 538 Blast hits to 271 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 534; Viruses - 4; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative BnaA02g28560D, Description = BnaA02g28560D protein, PFAM = PF11820)' T '35.2' 'not assigned.unknown' 'niben101scf00109_1110596-1112805' '(at3g27027 : 86.7) Protein of unknown function (DUF 3339); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3339 (InterPro:IPR021775); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF 3339) (TAIR:AT5G40980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative Os02g0508801, Description = Os02g0508801 protein, PFAM = PF11820)' T '35.2' 'not assigned.unknown' 'niben101scf00110_52559-71117' '(at2g38770 : 2299.0) EMBRYO DEFECTIVE 2765 (EMB2765); LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RNA helicase, putative (TAIR:AT5G47010.1); Has 4121 Blast hits to 3614 proteins in 689 species: Archae - 125; Bacteria - 655; Metazoa - 959; Fungi - 1056; Plants - 630; Viruses - 0; Other Eukaryotes - 696 (source: NCBI BLink). & (gnl|cdd|37017 : 1702.0) no description available & (gnl|cdd|31309 : 115.0) no description available & (reliability: 4598.0) & (original description: Putative AQR, Description = Intron-binding protein aquarius, PFAM = PF13087;PF13086;PF16399)' T '35.2' 'not assigned.unknown' 'niben101scf00110_292498-313489' '(at3g54500 : 228.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G64170.2). & (reliability: 456.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00111_94617-99265' '(at5g03795 : 481.0) Exostosin family protein; LOCATED IN: membrane; EXPRESSED IN: embryo, sepal, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT3G07620.1); Has 1413 Blast hits to 1401 proteins in 109 species: Archae - 0; Bacteria - 9; Metazoa - 310; Fungi - 4; Plants - 989; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (gnl|cdd|36239 : 289.0) no description available & (gnl|cdd|66673 : 186.0) no description available & (reliability: 962.0) & (original description: Putative At3g07620, Description = Probable glycosyltransferase At3g07620, PFAM = PF03016)' T '35.2' 'not assigned.unknown' 'niben101scf00113_354069-360466' ' no hits & (original description: Putative T1B9.10, Description = At3g07230, PFAM = PF08186)' T '35.2' 'not assigned.unknown' 'niben101scf00116_192865-197344' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00116_387426-392580' '(at1g11380 : 241.0) PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT5G05350.1); Has 314 Blast hits to 313 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 8; Plants - 293; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative BnaA06g07050D, Description = BnaA06g07050D protein, PFAM = PF04749)' T '35.2' 'not assigned.unknown' 'niben101scf00119_506794-509800' ' no hits & (original description: Putative , Description = , PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'niben101scf00121_7126-12517' '(at3g18050 : 278.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28100.1); Has 67 Blast hits to 66 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 556.0) & (original description: Putative At4g28100, Description = Uncharacterized GPI-anchored protein At4g28100, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00123_417069-422948' '(gnl|cdd|68437 : 509.0) no description available & (at5g11420 : 508.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF642 (TAIR:AT5G25460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1016.0) & (original description: Putative At5g25460, Description = At5g25460, PFAM = PF04862;PF04862)' T '35.2' 'not assigned.unknown' 'niben101scf00124_67289-71087' '(at1g73885 : 136.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; Has 37 Blast hits to 37 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative At1g73885, Description = At1g73885, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00127_9190-34260' '(at3g02680 : 408.0) DNA repair and meiotic recombination protein, component of MRE11 complex with RAD50 and MRE11; nijmegen breakage syndrome 1 (NBS1); CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); Has 164 Blast hits to 161 proteins in 63 species: Archae - 0; Bacteria - 2; Metazoa - 112; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 816.0) & (original description: Putative NBS1, Description = Nijmegen breakage syndrome 1 protein, PFAM = PF00498;PF00533)' T '35.2' 'not assigned.unknown' 'niben101scf00127_75136-77531' ' no hits & (original description: Putative orf132, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00128_36963-42228' '(at3g28370 : 160.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51430.1); Has 6174 Blast hits to 4953 proteins in 685 species: Archae - 195; Bacteria - 792; Metazoa - 2688; Fungi - 653; Plants - 470; Viruses - 15; Other Eukaryotes - 1361 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative BnaA06g31600D, Description = BnaA06g31600D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00128_187379-190744' ' no hits & (original description: Putative PGSC0003DMG402001401, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00128_224189-227063' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00130_702815-712037' '(at4g32570 : 120.0) TIFY domain protein 8 (TIFY8); CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative Ccrd_007664, Description = Tify, PFAM = PF06200)' T '35.2' 'not assigned.unknown' 'niben101scf00131_6756-11182' '(at1g65710 : 104.0) unknown protein; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G37010.1); Has 2241 Blast hits to 1776 proteins in 164 species: Archae - 0; Bacteria - 29; Metazoa - 1759; Fungi - 94; Plants - 93; Viruses - 17; Other Eukaryotes - 249 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00132_437123-444402' '(at1g04960 : 199.0) Protein of unknown function (DUF1664); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1664 (InterPro:IPR012458); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1664) (TAIR:AT1G27000.1); Has 160 Blast hits to 159 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 152; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative IDP96, Description = Wollemia nobilis Ref_Wollemi_Transcript_9443_1549 transcribed RNA sequence, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00133_483873-487027' '(at5g05480 : 468.0) Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A (InterPro:IPR021102); BEST Arabidopsis thaliana protein match is: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein (TAIR:AT3G14920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 936.0) & (original description: Putative Ccrd_016837, Description = Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A, PFAM = PF12222)' T '35.2' 'not assigned.unknown' 'niben101scf00133_1057816-1071510' '(at3g56040 : 966.0) UDP-glucose pyrophosphorylase 3 (UGP3); FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); Has 215 Blast hits to 211 proteins in 91 species: Archae - 0; Bacteria - 18; Metazoa - 12; Fungi - 60; Plants - 85; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 1932.0) & (original description: Putative UGP3, Description = UTP--glucose-1-phosphate uridylyltransferase 3, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00135_76061-78870' '(at4g13530 : 127.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10080.1); Has 70 Blast hits to 69 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative PGSC0003DMG400012413, Description = Actin-binding LIM protein 1, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00135_525008-528563' ' no hits & (original description: Putative BnaA03g05380D, Description = BnaA03g05380D protein, PFAM = PF05680)' T '35.2' 'not assigned.unknown' 'niben101scf00138_549849-552177' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00140_139505-142107' '(at5g10210 : 125.0) CONTAINS InterPro DOMAIN/s: C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative , Description = , PFAM = PF00168)' T '35.2' 'not assigned.unknown' 'niben101scf00140_159044-165591' '(at4g39860 : 292.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G22270.1); Has 148 Blast hits to 144 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 584.0) & (original description: Putative T5J17.30, Description = Putative uncharacterized protein AT4g39860, PFAM = PF13266)' T '35.2' 'not assigned.unknown' 'niben101scf00140_161951-165660' '(at4g39860 : 240.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G22270.1); Has 148 Blast hits to 144 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 480.0) & (original description: Putative At4g39860, Description = N-lysine methyltransferase SEE1, PFAM = PF13266)' T '35.2' 'not assigned.unknown' 'niben101scf00140_232490-252176' ' no hits & (original description: Putative BnaC03g76520D, Description = BnaC03g76520D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00141_206448-210115' '(at3g54000 : 96.7) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00144_171456-175413' ' no hits & (original description: Putative At3g11560, Description = LETM1-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00149_428638-433038' ' no hits & (original description: Putative PGSC0003DMG400030244, Description = , PFAM = PF14383)' T '35.2' 'not assigned.unknown' 'niben101scf00149_535023-539413' '(at5g01360 : 568.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 3 (TBL3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT3G55990.1); Has 1290 Blast hits to 1278 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 2; Plants - 1285; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 183.0) no description available & (reliability: 1136.0) & (original description: Putative TBL3, Description = Protein trichome birefringence-like 3, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf00149_731090-733732' ' (original description: Putative D19H, Description = Late embryogenesis abundant protein B19.1A, PFAM = PF00477)' T '35.2' 'not assigned.unknown' 'niben101scf00149_777602-780882' ' no hits & (original description: Putative , Description = , PFAM = PF02977)' T '35.2' 'not assigned.unknown' 'niben101scf00151_403530-409492' '(at5g25360 : 129.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1). & (reliability: 258.0) & (original description: Putative At3g15770, Description = DUF4050 family protein, PFAM = PF13259;PF13259)' T '35.2' 'not assigned.unknown' 'niben101scf00151_403574-409228' ' no hits & (original description: Putative , Description = 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, PFAM = PF13259)' T '35.2' 'not assigned.unknown' 'niben101scf00151_403752-409287' ' no hits & (original description: Putative , Description = 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, PFAM = PF13259)' T '35.2' 'not assigned.unknown' 'niben101scf00151_594577-598037' '(at4g02720 : 212.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF926 (InterPro:IPR009269); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69563 : 127.0) no description available & (gnl|cdd|38023 : 100.0) no description available & (reliability: 424.0) & (original description: Putative nkap, Description = NF-kappa-B-activating protein, PFAM = PF06047)' T '35.2' 'not assigned.unknown' 'niben101scf00152_275219-282269' '(at3g49990 : 259.0) unknown protein; Has 1524 Blast hits to 1298 proteins in 225 species: Archae - 9; Bacteria - 84; Metazoa - 474; Fungi - 184; Plants - 98; Viruses - 17; Other Eukaryotes - 658 (source: NCBI BLink). & (gnl|cdd|37848 : 125.0) no description available & (reliability: 518.0) & (original description: Putative BnaC07g31620D, Description = BnaC07g31620D protein, PFAM = PF04180)' T '35.2' 'not assigned.unknown' 'niben101scf00152_1648739-1655053' '(at1g30845 : 94.7) unknown protein; Has 120 Blast hits to 120 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 35; Fungi - 37; Plants - 23; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative LOC100280955, Description = Cell growth defect factor 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00152_1692866-1990137' ' (original description: Putative Tgt1ORF2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf00152_2535758-2538207' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00154_218998-221549' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00154_431493-433895' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00155_496811-525416' '(at1g55535 : 278.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13420.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 556.0) & (original description: Putative BnaA05g13680D, Description = BnaA05g13680D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00157_66858-72560' '(at1g50740 : 154.0) Transmembrane proteins 14C; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0136, Transmembrane (InterPro:IPR005349); BEST Arabidopsis thaliana protein match is: Transmembrane proteins 14C (TAIR:AT3G20510.1); Has 412 Blast hits to 412 proteins in 97 species: Archae - 0; Bacteria - 35; Metazoa - 172; Fungi - 4; Plants - 187; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|67275 : 97.7) no description available & (gnl|cdd|39468 : 96.9) no description available & (reliability: 308.0) & (original description: Putative FAX5, Description = Protein FATTY ACID EXPORT 5, PFAM = PF03647)' T '35.2' 'not assigned.unknown' 'niben101scf00157_72561-80948' '(at4g27040 : 440.0) VPS22; CONTAINS InterPro DOMAIN/s: ESCRT-2 complex, Snf8 (InterPro:IPR016689), EAP30 (InterPro:IPR007286); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38551 : 312.0) no description available & (gnl|cdd|86563 : 210.0) no description available & (reliability: 880.0) & (original description: Putative lsn, Description = Vacuolar-sorting protein SNF8, PFAM = PF04157)' T '35.2' 'not assigned.unknown' 'niben101scf00157_304164-308221' '(at1g50900 : 213.0) Ankyrin repeat family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); Has 55 Blast hits to 55 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative LTD, Description = Protein LHCP TRANSLOCATION DEFECT, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00157_556559-560189' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00158_11051-16988' '(at2g17990 : 273.0) BEST Arabidopsis thaliana protein match is: kinectin-related (TAIR:AT5G66250.3); Has 7578 Blast hits to 6129 proteins in 783 species: Archae - 220; Bacteria - 1045; Metazoa - 3605; Fungi - 575; Plants - 442; Viruses - 38; Other Eukaryotes - 1653 (source: NCBI BLink). & (reliability: 546.0) & (original description: Putative CAP2, Description = Putative calcium-dependent protein kinase CPK1 adapter protein 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00159_352541-366071' '(at2g32970 : 650.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages. & (reliability: 1300.0) & (original description: Putative BnaC03g18280D, Description = BnaC03g18280D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00160_98029-100208' ' no hits & (original description: Putative def7, Description = Defensin, PFAM = PF00304)' T '35.2' 'not assigned.unknown' 'niben101scf00161_237425-246625' '(at1g17850 : 513.0) Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1). & (gnl|cdd|80545 : 256.0) no description available & (reliability: 1026.0) & (original description: Putative STR8, Description = Rhodanese-like domain-containing protein 8, chloroplastic, PFAM = PF00581;PF12368)' T '35.2' 'not assigned.unknown' 'niben101scf00161_426700-492581' ' no hits & (original description: Putative MtrDRAFT_AC157891g39v2, Description = Polyprotein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00161_513755-516435' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00163_297603-300125' '(at2g33585 : 140.0) unknown protein; Has 31 Blast hits to 31 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative Os08g0512900, Description = Os08g0512900 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00163_360872-363213' ' no hits & (original description: Putative orf114c, Description = Orf109b, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00163_989433-1003579' '(at1g28710 : 332.0) Nucleotide-diphospho-sugar transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT1G28700.1). & (reliability: 664.0) & (original description: Putative RCOM_1502850, Description = Pentatricopeptide repeat-containing protein, putative, PFAM = PF03407)' T '35.2' 'not assigned.unknown' 'niben101scf00163_1076744-1079766' ' no hits & (original description: Putative GCL1, Description = Polyadenylate-binding protein 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00163_1343735-1350488' '(at5g51150 : 514.0) Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrial inner membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34630.1); Has 522 Blast hits to 429 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 235; Fungi - 150; Plants - 73; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|36612 : 315.0) no description available & (reliability: 1028.0) & (original description: Putative ST16, Description = BnaA03g13240D protein, PFAM = PF15982)' T '35.2' 'not assigned.unknown' 'niben101scf00163_1360803-1498822' ' no hits & (original description: Putative PGSC0003DMG400016007, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00163_1378069-1387384' '(at5g61670 : 466.0) Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons.; BEST Arabidopsis thaliana protein match is: chaperone protein dnaJ-related (TAIR:AT5G06130.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 932.0) & (original description: Putative dnaj, Description = Dnaj-like zinc-finger protein isoform, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00163_1980249-1982434' ' no hits & (original description: Putative psbZ, Description = Photosystem II reaction center protein Z, PFAM = PF01737)' T '35.2' 'not assigned.unknown' 'niben101scf00163_2091719-2094975' ' no hits & (original description: Putative DEF3, Description = DEF3 protein, PFAM = PF00304)' T '35.2' 'not assigned.unknown' 'niben101scf00165_1017560-1018718' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00167_28934-31715' '(at3g22510 : 108.0) Pre-rRNA-processing protein TSR2, conserved region; CONTAINS InterPro DOMAIN/s: Pre-rRNA-processing protein TSR2, conserved region (InterPro:IPR019398); BEST Arabidopsis thaliana protein match is: Pre-rRNA-processing protein TSR2, conserved region (TAIR:AT5G27990.1); Has 206 Blast hits to 206 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 55; Fungi - 70; Plants - 52; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative At3g22510, Description = At3g22510, PFAM = PF10273)' T '35.2' 'not assigned.unknown' 'niben101scf00167_145437-149266' '(at5g14090 : 97.8) unknown protein; Has 56 Blast hits to 56 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 46; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative PGSC0003DMG400020205, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00167_155307-157516' ' no hits & (original description: Putative Sb02g009520, Description = Putative uncharacterized protein Sb02g009520, PFAM = PF11820)' T '35.2' 'not assigned.unknown' 'niben101scf00167_158613-160822' '(at5g08391 : 83.2) Protein of unknown function (DUF 3339); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3339 (InterPro:IPR021775); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative At3g27030, Description = Transmembrane protein, putative, PFAM = PF11820)' T '35.2' 'not assigned.unknown' 'niben101scf00167_310105-315237' '(at3g27050 : 207.0) unknown protein; Has 43 Blast hits to 43 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00167_340465-342890' ' no hits & (original description: Putative , Description = Tyrosyl-tRNA synthetase, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf00167_600207-606000' '(at3g01860 : 84.7) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00168_306361-354322' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00168_617941-629923' '(at2g43945 : 339.0) unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G59870.1); Has 292 Blast hits to 292 proteins in 84 species: Archae - 0; Bacteria - 122; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (reliability: 678.0) & (original description: Putative orf228, Description = DNA recombination-mediator protein A, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00170_427080-429997' ' (original description: Putative cht1, Description = Chitinase 2, PFAM = PF00704)' T '35.2' 'not assigned.unknown' 'niben101scf00170_429998-432650' ' (original description: Putative chib1, Description = Chitinase 2, PFAM = PF00704)' T '35.2' 'not assigned.unknown' 'niben101scf00170_432651-435111' ' no hits & (original description: Putative , Description = Putative DNA ligase 1-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00170_650135-653775' '(at1g30800 : 115.0) Fasciclin-like arabinogalactan family protein; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29980.1); Has 70 Blast hits to 69 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative BnaA08g05250D, Description = BnaA08g05250D protein, PFAM = PF02469)' T '35.2' 'not assigned.unknown' 'niben101scf00170_650591-653034' '(at1g30800 : 115.0) Fasciclin-like arabinogalactan family protein; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29980.1); Has 70 Blast hits to 69 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative BnaA08g05250D, Description = BnaA08g05250D protein, PFAM = PF02469)' T '35.2' 'not assigned.unknown' 'niben101scf00173_12615-15201' '(at5g41980 : 108.0) CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative Os03g0157450, Description = CAI-1 autoinducer sensor kinase/phosphatase cqsS isoform 1, PFAM = PF13359)' T '35.2' 'not assigned.unknown' 'niben101scf00173_16237-23604' '(at2g16980 : 226.0) Major facilitator superfamily protein; FUNCTIONS IN: tetracycline transporter activity; INVOLVED IN: response to antibiotic, tetracycline transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Tetracycline resistance protein, TetA (InterPro:IPR001958), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G16970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38027 : 160.0) no description available & (reliability: 452.0) & (original description: Putative Sb05g003130, Description = Putative uncharacterized protein Sb05g003130, PFAM = PF07690)' T '35.2' 'not assigned.unknown' 'niben101scf00173_774317-776946' '(at5g65520 : 147.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative At5g65520, Description = Putative uncharacterized protein At5g65520, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00175_121754-124566' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00176_72291-75237' '(at1g61667 : 174.0) Protein of unknown function, DUF538; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT5G54530.1); Has 441 Blast hits to 441 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 440; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|86647 : 119.0) no description available & (reliability: 348.0) & (original description: Putative mc304, Description = Transmembrane protein, putative, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben101scf00176_83558-86156' ' no hits & (original description: Putative PGSC0003DMG400021719, Description = Transcription factor DYSFUNCTIONAL TAPETUM 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00176_247963-250212' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00176_539255-542545' '(at4g21310 : 186.0) Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT2G32280.1); Has 141 Blast hits to 141 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70227 : 94.2) no description available & (reliability: 372.0) & (original description: Putative At2g32280, Description = At2g32280, PFAM = PF06749)' T '35.2' 'not assigned.unknown' 'niben101scf00176_640947-646153' '(at1g61740 : 384.0) Sulfite exporter TauE/SafE family protein; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF81 (InterPro:IPR002781); BEST Arabidopsis thaliana protein match is: Sulfite exporter TauE/SafE family protein (TAIR:AT1G11540.1); Has 2571 Blast hits to 2364 proteins in 652 species: Archae - 89; Bacteria - 1424; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 853 (source: NCBI BLink). & (reliability: 768.0) & (original description: Putative BnaA09g13620D, Description = BnaA09g13620D protein, PFAM = PF01925;PF01925)' T '35.2' 'not assigned.unknown' 'niben101scf00176_868866-873539' '(at4g21215 : 85.9) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative PGSC0003DMG400002067, Description = BnaA03g58480D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00177_215041-218871' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00177_276467-281990' '(at3g04160 : 279.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage. & (reliability: 558.0) & (original description: Putative , Description = Putative U11/U12 small nuclear ribonucleoprotein 48 kDa protein-like, PFAM = PF05253)' T '35.2' 'not assigned.unknown' 'niben101scf00177_597260-603172' '(at2g38430 : 148.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative PGSC0003DMG400047079, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00177_704858-734827' '(at2g38430 : 180.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative PGSC0003DMG400020990, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00177_919967-928559' '(at1g08530 : 219.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09995.2); Has 140 Blast hits to 140 proteins in 53 species: Archae - 0; Bacteria - 63; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative At1g08530, Description = Putative uncharacterized protein At1g08530, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00180_155137-157577' ' no hits & (original description: Putative GRP, Description = Glycine-rich protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00180_491268-494008' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00180_1012661-1018320' '(at1g61065 : 201.0) Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT4G27435.1); Has 557 Blast hits to 557 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 557; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70227 : 121.0) no description available & (reliability: 402.0) & (original description: Putative BnaCnng18910D, Description = BnaCnng18910D protein, PFAM = PF06749)' T '35.2' 'not assigned.unknown' 'niben101scf00182_246271-249578' ' no hits & (original description: Putative , Description = , PFAM = PF00403)' T '35.2' 'not assigned.unknown' 'niben101scf00185_8081-11246' ' no hits & (original description: Putative asr5, Description = ASR5 protein, PFAM = PF02496)' T '35.2' 'not assigned.unknown' 'niben101scf00185_158058-161450' ' (original description: Putative In12, Description = Putative ripening protein, PFAM = PF02496)' T '35.2' 'not assigned.unknown' 'niben101scf00185_372913-387905' '(at4g08280 : 132.0) Thioredoxin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin like (InterPro:IPR008554), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative PGSC0003DMG400000918, Description = Glutaredoxin-like protein, PFAM = PF05768)' T '35.2' 'not assigned.unknown' 'niben101scf00187_151494-159441' ' no hits & (original description: Putative , Description = 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00187_240794-243123' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00189_40506-53911' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00189_332748-335164' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00189_702079-704666' ' no hits & (original description: Putative PGSC0003DMG401016146, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00192_236866-239540' ' no hits & (original description: Putative F383_26418, Description = Putative Xaa-Pro aminopeptidase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00193_50439-53467' '(at3g11810 : 176.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G03330.1); Has 141 Blast hits to 141 proteins in 21 species: Archae - 0; Bacteria - 9; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative BnaA09g19250D, Description = BnaA09g19250D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00199_182847-185782' ' no hits & (original description: Putative , Description = , PFAM = PF05633)' T '35.2' 'not assigned.unknown' 'niben101scf00199_549507-571824' '(at5g01010 : 625.0) EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038). & (reliability: 1250.0) & (original description: Putative BnaAnng00010D, Description = BnaAnng00010D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00202_303746-306302' ' no hits & (original description: Putative PGSC0003DMG400028755, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00202_434466-437317' '(at5g66440 : 92.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative PGSC0003DMG400000718, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00202_723405-725527' ' no hits & (original description: Putative CPuORF2, Description = Conserved peptide upstream open reading frame 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00202_837984-840983' ' no hits & (original description: Putative PGSC0003DMG400030948, Description = Aspartate carbamoyltransferase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00203_98442-103415' '(at1g23790 : 469.0) Plant protein of unknown function (DUF936); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF936, plant (InterPro:IPR010341); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF936) (TAIR:AT1G70340.1); Has 265 Blast hits to 216 proteins in 30 species: Archae - 0; Bacteria - 7; Metazoa - 9; Fungi - 7; Plants - 237; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|69589 : 241.0) no description available & (reliability: 938.0) & (original description: Putative ARALYDRAFT_676550, Description = Predicted protein, PFAM = PF06075;PF06075)' T '35.2' 'not assigned.unknown' 'niben101scf00206_87773-96994' '(at1g73020 : 792.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF590 (InterPro:IPR007632). & (gnl|cdd|37724 : 382.0) no description available & (gnl|cdd|68131 : 181.0) no description available & (reliability: 1584.0) & (original description: Putative Os01g0706700, Description = Anoctamin-like protein Os01g0706700, PFAM = PF04547)' T '35.2' 'not assigned.unknown' 'niben101scf00207_284784-289795' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00211_1342-3678' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00211_73923-90657' '(at2g21120 : 395.0) Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF803) (TAIR:AT4G38730.1); Has 1321 Blast hits to 1303 proteins in 250 species: Archae - 0; Bacteria - 151; Metazoa - 424; Fungi - 360; Plants - 267; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (gnl|cdd|38133 : 376.0) no description available & (gnl|cdd|86910 : 376.0) no description available & (reliability: 790.0) & (original description: Putative At2g21120, Description = Probable magnesium transporter NIPA6, PFAM = PF05653)' T '35.2' 'not assigned.unknown' 'niben101scf00212_72038-75551' '(at1g53380 : 397.0) Plant protein of unknown function (DUF641); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF641) (TAIR:AT3G14870.1); Has 313 Blast hits to 310 proteins in 37 species: Archae - 0; Bacteria - 16; Metazoa - 2; Fungi - 2; Plants - 281; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|68434 : 141.0) no description available & (reliability: 794.0) & (original description: Putative BnaC03g76000D, Description = BnaC03g76000D protein, PFAM = PF04859)' T '35.2' 'not assigned.unknown' 'niben101scf00212_178992-184503' ' no hits & (original description: Putative glysoja_038102, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00212_267240-271030' '(at3g14900 : 614.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 17135 Blast hits to 10204 proteins in 644 species: Archae - 47; Bacteria - 1684; Metazoa - 5536; Fungi - 2506; Plants - 1043; Viruses - 361; Other Eukaryotes - 5958 (source: NCBI BLink). & (reliability: 1228.0) & (original description: Putative At3g14900, Description = Putative uncharacterized protein At3g14900, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00212_284301-292732' '(at3g14910 : 668.0) unknown protein; Has 158 Blast hits to 158 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|37938 : 431.0) no description available & (reliability: 1336.0) & (original description: Putative At3g14910, Description = At3g14910, PFAM = PF14655)' T '35.2' 'not assigned.unknown' 'niben101scf00213_255274-257728' ' no hits & (original description: Putative sar, Description = Putative SAR8.2a-like protein, PFAM = PF03058)' T '35.2' 'not assigned.unknown' 'niben101scf00214_10230-13105' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00214_347592-351016' '(at4g28230 : 173.0) unknown protein; Has 444 Blast hits to 358 proteins in 107 species: Archae - 0; Bacteria - 20; Metazoa - 179; Fungi - 26; Plants - 38; Viruses - 2; Other Eukaryotes - 179 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative PGSC0003DMG400018371, Description = Putative microtubule-associated protein futsch-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00215_678970-706628' '(gnl|cdd|69613 : 744.0) no description available & (at2g44260 : 644.0) Plant protein of unknown function (DUF946); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF946 (InterPro:IPR009291); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF946) (TAIR:AT2G44230.1); Has 355 Blast hits to 329 proteins in 91 species: Archae - 0; Bacteria - 23; Metazoa - 15; Fungi - 113; Plants - 198; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 1288.0) & (original description: Putative BnaA06g30220D, Description = BnaA06g30220D protein, PFAM = PF06101)' T '35.2' 'not assigned.unknown' 'niben101scf00215_880470-882853' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00216_27572-30318' '(at2g37880 : 224.0) Protein of unknown function, DUF617; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF617, plant (InterPro:IPR006460); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF617 (TAIR:AT1G21050.1); Has 257 Blast hits to 256 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68336 : 180.0) no description available & (reliability: 448.0) & (original description: Putative MIZ1, Description = Protein MIZU-KUSSEI 1, PFAM = PF04759)' T '35.2' 'not assigned.unknown' 'niben101scf00218_87635-97872' ' no hits & (original description: Putative , Description = Cytochrome C oxidase, subunit VIb family protein, PFAM = PF02297)' T '35.2' 'not assigned.unknown' 'niben101scf00219_298459-301256' '(at5g42680 : 285.0) Protein of unknown function, DUF617; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF617, plant (InterPro:IPR006460); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF617 (TAIR:AT4G39610.1). & (gnl|cdd|68336 : 228.0) no description available & (reliability: 570.0) & (original description: Putative BnaA06g33470D, Description = BnaA06g33470D protein, PFAM = PF04759)' T '35.2' 'not assigned.unknown' 'niben101scf00219_464728-487649' '(at1g47550 : 1473.0) Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.; exocyst complex component sec3A (SEC3A); INVOLVED IN: biological_process unknown; LOCATED IN: exocyst; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Exocyst complex, component Exoc1 (InterPro:IPR019160); BEST Arabidopsis thaliana protein match is: exocyst complex component sec3B (TAIR:AT1G47560.1). & (gnl|cdd|37359 : 969.0) no description available & (reliability: 2946.0) & (original description: Putative SEC3A, Description = Exocyst complex component SEC3A, PFAM = PF15277;PF09763;PF09763)' T '35.2' 'not assigned.unknown' 'niben101scf00219_640001-645369' '(at1g47740 : 369.0) PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT5G25170.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35545 : 231.0) no description available & (gnl|cdd|69428 : 171.0) no description available & (reliability: 738.0) & (original description: Putative At4g17486, Description = DeSI-like protein At4g17486, PFAM = PF05903)' T '35.2' 'not assigned.unknown' 'niben101scf00219_656567-663313' '(at4g16580 : 536.0) Protein phosphatase 2C family protein; FUNCTIONS IN: phosphoprotein phosphatase activity, catalytic activity; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Sporulation stage II, protein E C-terminal (InterPro:IPR010822); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66720.1); Has 838 Blast hits to 828 proteins in 210 species: Archae - 0; Bacteria - 2; Metazoa - 184; Fungi - 235; Plants - 232; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (gnl|cdd|36593 : 328.0) no description available & (reliability: 1072.0) & (original description: Putative At4g16580, Description = Probable protein phosphatase 2C 55, PFAM = PF07228)' T '35.2' 'not assigned.unknown' 'niben101scf00219_805639-811551' '(at1g75180 : 335.0) Erythronate-4-phosphate dehydrogenase family protein; BEST Arabidopsis thaliana protein match is: Erythronate-4-phosphate dehydrogenase family protein (TAIR:AT1G19400.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 670.0) & (original description: Putative At1g01500, Description = Uncharacterized protein At1g01500, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00220_333751-338691' ' no hits & (original description: Putative PGSC0003DMG400016532, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00220_497104-510192' '(at2g25737 : 370.0) Sulfite exporter TauE/SafE family protein; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF81 (InterPro:IPR002781); BEST Arabidopsis thaliana protein match is: Sulfite exporter TauE/SafE family protein (TAIR:AT2G36630.1); Has 3417 Blast hits to 2961 proteins in 724 species: Archae - 129; Bacteria - 1927; Metazoa - 0; Fungi - 0; Plants - 198; Viruses - 0; Other Eukaryotes - 1163 (source: NCBI BLink). & (reliability: 740.0) & (original description: Putative BnaC03g72820D, Description = BnaC03g72820D protein, PFAM = PF01925;PF01925)' T '35.2' 'not assigned.unknown' 'niben101scf00220_524755-527381' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00220_610453-614326' '(at1g79910 : 180.0) Regulator of Vps4 activity in the MVB pathway protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061); BEST Arabidopsis thaliana protein match is: Regulator of Vps4 activity in the MVB pathway protein (TAIR:AT1G52315.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37238 : 144.0) no description available & (gnl|cdd|67036 : 116.0) no description available & (reliability: 360.0) & (original description: Putative BnaA07g35910D, Description = BnaA07g35910D protein, PFAM = PF03398)' T '35.2' 'not assigned.unknown' 'niben101scf00223_59844-63772' '(at2g28690 : 162.0) Protein of unknown function (DUF1635); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1635 (InterPro:IPR012862); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1635) (TAIR:AT5G59760.1); Has 114 Blast hits to 114 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|71235 : 133.0) no description available & (reliability: 324.0) & (original description: Putative BnaA07g14070D, Description = BnaA07g14070D protein, PFAM = PF07795)' T '35.2' 'not assigned.unknown' 'niben101scf00223_327778-333826' ' no hits & (original description: Putative pol, Description = Retrotransposon protein, putative, unclassified, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf00225_441121-443963' '(at5g24460 : 236.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative BnaC09g04390D, Description = BnaC09g04390D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00225_529494-540634' ' no hits & (original description: Putative TCM_015509, Description = Uncharacterized protein isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00225_645277-647576' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00225_801206-803859' ' (original description: Putative , Description = , PFAM = PF04520)' T '35.2' 'not assigned.unknown' 'niben101scf00226_32854-35096' ' no hits & (original description: Putative RAD, Description = Transcription factor RADIALIS, PFAM = PF00249)' T '35.2' 'not assigned.unknown' 'niben101scf00228_808991-811875' '(gnl|cdd|68298 : 202.0) no description available & (at3g07350 : 194.0) Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT3G25240.1); Has 393 Blast hits to 390 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 391; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative TCM_002725, Description = Sulfate/thiosulfate import ATP-binding protein cysA, putative, PFAM = PF04720)' T '35.2' 'not assigned.unknown' 'niben101scf00231_343725-348511' '(at1g27290 : 137.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative BnaAnng21740D, Description = BnaAnng21740D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00231_362285-376875' '(at1g27385 : 233.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454); Has 79 Blast hits to 79 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative , Description = , PFAM = PF04359)' T '35.2' 'not assigned.unknown' 'niben101scf00231_823896-826786' '(at1g23710 : 139.0) Protein of unknown function (DUF1645); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT1G70420.1); Has 288 Blast hits to 282 proteins in 52 species: Archae - 0; Bacteria - 6; Metazoa - 16; Fungi - 11; Plants - 191; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|71256 : 97.1) no description available & (reliability: 278.0) & (original description: Putative , Description = , PFAM = PF07816)' T '35.2' 'not assigned.unknown' 'niben101scf00234_157511-167649' '(at5g49830 : 991.0) Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.; exocyst complex component 84B (EXO84B); LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps51/Vps67 (InterPro:IPR014812); BEST Arabidopsis thaliana protein match is: Vps51/Vps67 family (components of vesicular transport) protein (TAIR:AT1G10385.1); Has 307 Blast hits to 283 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 55; Plants - 127; Viruses - 2; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|37426 : 511.0) no description available & (reliability: 1982.0) & (original description: Putative EXO84B, Description = Exocyst complex component EXO84B, PFAM = PF16528;PF08700)' T '35.2' 'not assigned.unknown' 'niben101scf00234_222969-227170' '(at3g21190 : 511.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G51630.1); Has 760 Blast hits to 758 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 760; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 134.0) no description available & (reliability: 1022.0) & (original description: Putative At3g21190, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T '35.2' 'not assigned.unknown' 'niben101scf00234_238464-241008' ' no hits & (original description: Putative pca1, Description = Calcium-transporting ATPase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00236_67300-74082' '(at4g32930 : 224.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF866, eukaryotic (InterPro:IPR008584). & (gnl|cdd|86976 : 190.0) no description available & (gnl|cdd|36510 : 186.0) no description available & (reliability: 448.0) & (original description: Putative , Description = , PFAM = PF05907)' T '35.2' 'not assigned.unknown' 'niben101scf00236_186112-190996' '(at5g11810 : 305.0) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 610.0) & (original description: Putative Sb04g002870, Description = Putative uncharacterized protein Sb04g002870, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00239_398235-404999' '(at4g19160 : 478.0) unknown protein; Has 315 Blast hits to 315 proteins in 152 species: Archae - 0; Bacteria - 250; Metazoa - 2; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 956.0) & (original description: Putative , Description = , PFAM = PF13369;PF13371)' T '35.2' 'not assigned.unknown' 'niben101scf00239_1056814-1061241' ' (original description: Putative FH3, Description = Formin-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00239_1057252-1060552' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00239_1101748-1103339' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf00240_63314-71407' '(at1g53800 : 348.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 696.0) & (original description: Putative BnaC06g06580D, Description = BnaC06g06580D protein, PFAM = PF07460)' T '35.2' 'not assigned.unknown' 'niben101scf00240_164326-166679' ' no hits & (original description: Putative orf118, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00240_164536-166967' ' no hits & (original description: Putative orf144, Description = Orf144, PFAM = PF01348)' T '35.2' 'not assigned.unknown' 'niben101scf00244_62854-67896' '(at3g08670 : 233.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51540.1); Has 48380 Blast hits to 29827 proteins in 1356 species: Archae - 46; Bacteria - 5589; Metazoa - 17361; Fungi - 13192; Plants - 2237; Viruses - 905; Other Eukaryotes - 9050 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative PGSC0003DMG400002318, Description = At3g08670, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00245_37162-40129' '(at3g25400 : 120.0) CONTAINS InterPro DOMAIN/s: NTP Pyrophosphohydrolase MazG-related, RS21-C6 (InterPro:IPR011394), EAR (InterPro:IPR009039), NTP pyrophosphohydrolase MazG, putative catalytic core (InterPro:IPR004518); Has 1123 Blast hits to 1121 proteins in 452 species: Archae - 22; Bacteria - 753; Metazoa - 81; Fungi - 3; Plants - 83; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative CDA03, Description = Nucleotide pyrophosphohydrolase, PFAM = PF12643)' T '35.2' 'not assigned.unknown' 'niben101scf00245_358972-361562' ' no hits & (original description: Putative PGSC0003DMG400017084, Description = , PFAM = PF13499)' T '35.2' 'not assigned.unknown' 'niben101scf00245_444764-449034' '(at5g62440 : 136.0) Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division.; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: nucleologenesis, regulation of cell division, embryo development; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3223 (InterPro:IPR021602); Has 1122 Blast hits to 800 proteins in 144 species: Archae - 2; Bacteria - 150; Metazoa - 333; Fungi - 187; Plants - 279; Viruses - 3; Other Eukaryotes - 168 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative EMB514, Description = DUF3223 family protein, PFAM = PF11523)' T '35.2' 'not assigned.unknown' 'niben101scf00245_520241-529361' ' no hits & (original description: Putative PGSC0003DMG400030371, Description = , PFAM = PF00170)' T '35.2' 'not assigned.unknown' 'niben101scf00245_585713-589838' '(at5g58575 : 184.0) CONTAINS InterPro DOMAIN/s: Sgf11, transcriptional regulation (InterPro:IPR013246); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative PGSC0003DMG400030447, Description = SAGA-associated factor 11, PFAM = PF08209)' T '35.2' 'not assigned.unknown' 'niben101scf00245_752103-768497' '(at5g58510 : 991.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55060.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37601 : 127.0) no description available & (reliability: 1982.0) & (original description: Putative At5g58510, Description = Putative uncharacterized protein At5g58510, PFAM = PF13890;PF13890)' T '35.2' 'not assigned.unknown' 'niben101scf00246_255478-268328' ' no hits & (original description: Putative rpmG, Description = 50S ribosomal protein L33, PFAM = PF00471)' T '35.2' 'not assigned.unknown' 'niben101scf00246_481685-485362' '(at3g62450 : 105.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 35 Blast hits to 35 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative BnaC08g32240D, Description = BnaC08g32240D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00246_650426-679048' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00247_60590-63765' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00247_542309-551150' '(at4g03150 : 161.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative glysoja_002140, Description = Auxin response factor, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00247_601423-603824' ' no hits & (original description: Putative AGP26, Description = Classical arabinogalactan protein 26, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00247_632942-635931' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf00247_636288-639618' ' no hits & (original description: Putative BnaC02g26490D, Description = BnaC02g26490D protein, PFAM = PF08524)' T '35.2' 'not assigned.unknown' 'niben101scf00248_1030-5753' '(at5g43750 : 245.0) NAD(P)H dehydrogenase 18 (NDH18); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 490.0) & (original description: Putative PnsB5, Description = NAD(P)H dehydrogenase 18, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00251_93749-97607' ' (original description: Putative PGSC0003DMG400006092, Description = Putative uncharacterized protein Sb01g005120, PFAM = PF10153)' T '35.2' 'not assigned.unknown' 'niben101scf00254_80553-83773' '(gnl|cdd|69171 : 474.0) no description available & (at1g63930 : 415.0) from the Czech 'roh' meaning 'corner' (ROH1); CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT4G23530.1); Has 150 Blast hits to 147 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 1; Plants - 145; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 830.0) & (original description: Putative BnaC05g50160D, Description = BnaC05g50160D protein, PFAM = PF05633)' T '35.2' 'not assigned.unknown' 'niben101scf00254_223180-225920' ' no hits & (original description: Putative SP1L5, Description = Protein SPIRAL1-like 5, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00254_404464-407612' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00254_833254-837701' '(at5g41380 : 154.0) CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT1G63820.1); Has 1690 Blast hits to 1687 proteins in 111 species: Archae - 0; Bacteria - 2; Metazoa - 13; Fungi - 3; Plants - 1603; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative At5g41380, Description = CCT motif family protein, PFAM = PF06203)' T '35.2' 'not assigned.unknown' 'niben101scf00257_45879-201847' ' no hits & (original description: Putative At4g32560, Description = Coiled-coil domain-containing protein 93 isoform 4, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00258_112206-118696' '(at3g02860 : 169.0) zinc ion binding; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880); Has 2461 Blast hits to 1944 proteins in 239 species: Archae - 0; Bacteria - 112; Metazoa - 958; Fungi - 273; Plants - 97; Viruses - 6; Other Eukaryotes - 1015 (source: NCBI BLink). & (gnl|cdd|38242 : 120.0) no description available & (reliability: 338.0) & (original description: Putative ZNF1, Description = Zinc finger protein 830-like protein, PFAM = PF12874)' T '35.2' 'not assigned.unknown' 'niben101scf00261_246097-250678' ' no hits & (original description: Putative Os06g0113900, Description = Os06g0113900 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00262_160506-165109' '(at1g57610 : 291.0) Protein of unknown function (DUF607); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF607 (InterPro:IPR006769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF607) (TAIR:AT1G09575.1); Has 326 Blast hits to 326 proteins in 103 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 24; Plants - 122; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|38177 : 221.0) no description available & (gnl|cdd|68256 : 212.0) no description available & (reliability: 582.0) & (original description: Putative At1g57610, Description = Calcium uniporter protein 5, mitochondrial, PFAM = PF04678)' T '35.2' 'not assigned.unknown' 'niben101scf00264_23152-37241' '(at5g25070 : 265.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 530.0) & (original description: Putative PGSC0003DMG400025663, Description = Os08g0516000 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00264_191242-198403' '(at1g76620 : 338.0) Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT1G21060.1); Has 866 Blast hits to 747 proteins in 129 species: Archae - 0; Bacteria - 108; Metazoa - 79; Fungi - 87; Plants - 458; Viruses - 1; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|68359 : 183.0) no description available & (reliability: 676.0) & (original description: Putative At1g21060, Description = BnaA04g13840D protein, PFAM = PF04784;PF14389)' T '35.2' 'not assigned.unknown' 'niben101scf00264_382408-386473' '(at2g33570 : 671.0) Domain of unknown function (DUF23); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF23) (TAIR:AT5G44670.1); Has 195 Blast hits to 195 proteins in 24 species: Archae - 2; Bacteria - 7; Metazoa - 43; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|85620 : 101.0) no description available & (gnl|cdd|39932 : 86.4) no description available & (reliability: 1342.0) & (original description: Putative GALS1, Description = Galactan beta-1,4-galactosyltransferase GALS1, PFAM = PF01697)' T '35.2' 'not assigned.unknown' 'niben101scf00268_353093-355536' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00268_480075-482485' ' no hits & (original description: Putative BnaA05g02670D, Description = BnaA05g02670D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00269_89725-150203' ' no hits & (original description: Putative , Description = RALF-LIKE 32 family protein, PFAM = PF05498)' T '35.2' 'not assigned.unknown' 'niben101scf00270_491955-496798' ' no hits & (original description: Putative PGSC0003DMG400021604, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00270_1302758-1305365' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00270_1313917-1318438' '(at1g79390 : 187.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative BnaC06g39780D, Description = BnaC06g39780D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00270_1437476-1440674' '(at1g05510 : 360.0) Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: seed; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1264 (InterPro:IPR010686); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1264) (TAIR:AT2G31985.1); Has 295 Blast hits to 295 proteins in 126 species: Archae - 0; Bacteria - 124; Metazoa - 0; Fungi - 67; Plants - 102; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|70357 : 289.0) no description available & (reliability: 720.0) & (original description: Putative OBAP1A, Description = Oil body-associated protein 1A, PFAM = PF06884)' T '35.2' 'not assigned.unknown' 'niben101scf00271_147534-163125' '(at1g31300 : 379.0) TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT4G19645.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69487 : 277.0) no description available & (gnl|cdd|39761 : 180.0) no description available & (reliability: 758.0) & (original description: Putative TdLFC39, Description = Putative TdLFC39 protein, PFAM = PF03798)' T '35.2' 'not assigned.unknown' 'niben101scf00271_187028-194091' '(at3g55600 : 160.0) Membrane fusion protein Use1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Use1 (InterPro:IPR019150); BEST Arabidopsis thaliana protein match is: Membrane fusion protein Use1 (TAIR:AT1G54110.1); Has 235 Blast hits to 235 proteins in 85 species: Archae - 1; Bacteria - 13; Metazoa - 90; Fungi - 42; Plants - 82; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative At1g54110, Description = Membrane fusion protein Use1, PFAM = PF09753)' T '35.2' 'not assigned.unknown' 'niben101scf00271_526863-529396' '(at1g07090 : 227.0) LIGHT SENSITIVE HYPOCOTYLS 6 (LSH6); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT5G58500.1); Has 311 Blast hits to 311 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68427 : 224.0) no description available & (reliability: 454.0) & (original description: Putative ELE, Description = Protein ELONGATED EMPTY GLUME, PFAM = PF04852)' T '35.2' 'not assigned.unknown' 'niben101scf00272_825109-827393' ' no hits & (original description: Putative PGSC0003DMG400018456, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00272_1175101-1181094' '(at2g46420 : 442.0) Plant protein 1589 of unknown function; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476); BEST Arabidopsis thaliana protein match is: Plant protein 1589 of unknown function (TAIR:AT3G61700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|88257 : 99.0) no description available & (reliability: 884.0) & (original description: Putative BnaA09g39420D, Description = Putative homeobox HD1-like, PFAM = PF09713)' T '35.2' 'not assigned.unknown' 'niben101scf00273_712241-714702' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00274_322845-325036' ' no hits & (original description: Putative TCM_021049, Description = Small acidic protein 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00274_400665-405470' ' no hits & (original description: Putative PGSC0003DMG402001493, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00276_80938-84135' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00276_155967-158350' '(at5g64816 : 191.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative At5g64816, Description = Uncharacterized protein At5g64816, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00278_310685-314661' ' (original description: Putative rTeg1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF00665)' T '35.2' 'not assigned.unknown' 'niben101scf00278_319674-324355' ' no hits & (original description: Putative PGSC0003DMG402009319, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00279_68810-72124' ' no hits & (original description: Putative PGSC0003DMG400024171, Description = , PFAM = PF00642)' T '35.2' 'not assigned.unknown' 'niben101scf00279_916412-919689' '(at5g64090 : 342.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hyccin (InterPro:IPR018619); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39886 : 214.0) no description available & (reliability: 684.0) & (original description: Putative At5g64090, Description = At5g64090, PFAM = PF09790)' T '35.2' 'not assigned.unknown' 'niben101scf00280_302538-308589' ' no hits & (original description: Putative At2g39540, Description = Gibberellin-regulated protein 8, PFAM = PF02704)' T '35.2' 'not assigned.unknown' 'niben101scf00285_74468-77649' ' no hits & (original description: Putative , Description = , PFAM = PF02977)' T '35.2' 'not assigned.unknown' 'niben101scf00285_1268471-1275662' '(at2g36835 : 160.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative At2g36835, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00288_120549-126977' '(at5g58370 : 439.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: barrier septum formation; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein, HSR1-related (InterPro:IPR002917), GTP-binding protein, ribosome biogenesis, YsxC (InterPro:IPR019987); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G22870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|57961 : 188.0) no description available & (gnl|cdd|37697 : 139.0) no description available & (reliability: 878.0) & (original description: Putative engB, Description = Probable GTP-binding protein EngB, PFAM = PF01926)' T '35.2' 'not assigned.unknown' 'niben101scf00288_569613-635742' '(at5g58450 : 1147.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: N-acetyltransferase B complex, non-catalytic subunit (InterPro:IPR019183), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37264 : 559.0) no description available & (reliability: 2294.0) & (original description: Putative At5g58450, Description = Tetratricopeptide repeat-containing protein, PFAM = PF09797)' T '35.2' 'not assigned.unknown' 'niben101scf00288_1685498-1724084' '(at5g58510 : 306.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55060.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37601 : 153.0) no description available & (reliability: 612.0) & (original description: Putative At5g58510, Description = Rab3 GTPase-activating protein catalytic subunit, PFAM = PF13890)' T '35.2' 'not assigned.unknown' 'niben101scf00289_157857-163552' '(at4g10090 : 272.0) elongator protein 6 (ELP6); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2348 (InterPro:IPR018627); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39921 : 155.0) no description available & (reliability: 544.0) & (original description: Putative ELP6, Description = Elongator complex protein 6, PFAM = PF09807)' T '35.2' 'not assigned.unknown' 'niben101scf00289_170142-172714' ' no hits & (original description: Putative , Description = , PFAM = PF15370)' T '35.2' 'not assigned.unknown' 'niben101scf00290_47787-50116' ' no hits & (original description: Putative PSBT, Description = Photosystem II 5 kDa protein, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00291_256341-258667' ' no hits & (original description: Putative orf109a, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00293_1179523-1184457' '(at1g29050 : 385.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 38 (TBL38); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 37 (TAIR:AT2G34070.1); Has 1347 Blast hits to 1329 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1344; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|72785 : 171.0) no description available & (reliability: 770.0) & (original description: Putative gal2, Description = Alpha galactosidase, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf00293_1247443-1252881' '(at1g29050 : 355.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 38 (TBL38); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 37 (TAIR:AT2G34070.1); Has 1347 Blast hits to 1329 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1344; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|72785 : 155.0) no description available & (reliability: 710.0) & (original description: Putative gal2, Description = Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf00294_23077-25559' '(gnl|cdd|68105 : 129.0) no description available & (at5g60680 : 103.0) Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT3G45210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative glysoja_007963, Description = , PFAM = PF04520)' T '35.2' 'not assigned.unknown' 'niben101scf00294_84114-86861' ' (original description: Putative PI-2, Description = Proteinase inhibitor, PFAM = PF00280)' T '35.2' 'not assigned.unknown' 'niben101scf00294_116879-119399' ' (original description: Putative GTI, Description = Wound-induced proteinase inhibitor 1, PFAM = PF00280)' T '35.2' 'not assigned.unknown' 'niben101scf00296_97361-100389' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00298_196230-218061' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00298_245394-251009' '(at1g19130 : 264.0) CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF985 (InterPro:IPR009327), RmlC-like jelly roll fold (InterPro:IPR014710); Has 1465 Blast hits to 1465 proteins in 584 species: Archae - 10; Bacteria - 1038; Metazoa - 19; Fungi - 43; Plants - 51; Viruses - 0; Other Eukaryotes - 304 (source: NCBI BLink). & (gnl|cdd|87031 : 158.0) no description available & (reliability: 528.0) & (original description: Putative At1g19130, Description = Putative uncharacterized protein At1g19130/F14D16_18, PFAM = PF06172)' T '35.2' 'not assigned.unknown' 'niben101scf00301_467032-469379' '(at3g57785 : 136.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42310.1); Has 121 Blast hits to 121 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 48; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative At3g57785, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00302_235952-251249' '(at5g01660 : 567.0) CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G11000.1); Has 16133 Blast hits to 7053 proteins in 482 species: Archae - 40; Bacteria - 1227; Metazoa - 10756; Fungi - 311; Plants - 1896; Viruses - 673; Other Eukaryotes - 1230 (source: NCBI BLink). & (gnl|cdd|39642 : 207.0) no description available & (p37707|b2_dauca : 100.0) B2 protein - Daucus carota (Carrot) & (reliability: 1134.0) & (original description: Putative At5g01660, Description = Kelch-like protein 1, PFAM = PF01344;PF01344;PF01344;PF01344;PF01344;PF10539)' T '35.2' 'not assigned.unknown' 'niben101scf00305_18420-23731' ' no hits & (original description: Putative PGSC0003DMG400003600, Description = , PFAM = PF02987)' T '35.2' 'not assigned.unknown' 'niben101scf00305_472587-476733' ' no hits & (original description: Putative , Description = Putative replication protein A 70 kDa DNA-binding subunit B-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00305_473008-599321' ' no hits & (original description: Putative , Description = Putative replication protein A 70 kDa DNA-binding subunit B-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00305_508644-514338' '(at5g27740 : 228.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 2775 (EMB2775); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp-loader complex, subunit E, C-terminal (InterPro:IPR019483), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921); BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA) (TAIR:AT1G21690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37246 : 224.0) no description available & (gnl|cdd|84125 : 101.0) no description available & (reliability: 456.0) & (original description: Putative Sb04g030580, Description = Putative uncharacterized protein Sb04g030580, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00305_651862-654212' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00306_25514-27855' ' no hits & (original description: Putative TER1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00307_270230-273958' '(gnl|cdd|86287 : 413.0) no description available & (at1g10880 : 389.0) Putative role in response to salt stress. Mutants grow larger than the wild type under salt stress condition (Ann Stapleton and Ashley Green, 2009, personal communication).; Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G16170.1); Has 696 Blast hits to 692 proteins in 56 species: Archae - 2; Bacteria - 7; Metazoa - 8; Fungi - 7; Plants - 576; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (reliability: 778.0) & (original description: Putative At1g10880, Description = Putative uncharacterized protein At1g10880, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben101scf00308_39403-42058' '(at4g27660 : 144.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54150.1); Has 115 Blast hits to 109 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative , Description = 31 kDa ribonucleoprotein, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00311_427698-430728' ' no hits & (original description: Putative PGSC0003DMG400022309, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00311_502779-505162' ' no hits & (original description: Putative PGSC0003DMG400022310, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00311_658934-666120' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00313_656028-658813' ' (original description: Putative pol, Description = Reverse transcriptase, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf00314_165917-168303' ' no hits & (original description: Putative , Description = DNA/RNA polymerases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00314_361497-363883' ' no hits & (original description: Putative , Description = , PFAM = PF12061)' T '35.2' 'not assigned.unknown' 'niben101scf00315_5378-12285' '(at3g60480 : 95.9) unknown protein; Has 17 Blast hits to 17 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative BnaC08g30680D, Description = BnaC08g30680D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00315_12238-22732' '(at4g00026 : 268.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim21 (InterPro:IPR013261); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|71727 : 84.1) no description available & (reliability: 536.0) & (original description: Putative SD3, Description = BnaAnng20480D protein, PFAM = PF08294)' T '35.2' 'not assigned.unknown' 'niben101scf00316_128761-131387' ' no hits & (original description: Putative PGSC0003DMG400023605, Description = , PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf00317_6743-45900' ' no hits & (original description: Putative PGSC0003DMG402004821, Description = BnaAnng13390D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00317_85197-89981' '(at4g17350 : 262.0) CONTAINS InterPro DOMAIN/s: Pleckstrin-like, plant (InterPro:IPR013666), Protein of unknown function DUF828 (InterPro:IPR008546), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region (TAIR:AT5G47440.1); Has 205 Blast hits to 188 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 199; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|69238 : 234.0) no description available & (reliability: 524.0) & (original description: Putative FKD1, Description = BnaA03g43020D protein, PFAM = PF08458;PF05703;PF05703)' T '35.2' 'not assigned.unknown' 'niben101scf00317_195926-208614' '(at5g47380 : 558.0) Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT5G66600.3); Has 575 Blast hits to 559 proteins in 76 species: Archae - 2; Bacteria - 39; Metazoa - 40; Fungi - 0; Plants - 462; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (gnl|cdd|68359 : 165.0) no description available & (reliability: 1116.0) & (original description: Putative BnaA09g18270D, Description = BnaA09g18270D protein, PFAM = PF04784;PF14389)' T '35.2' 'not assigned.unknown' 'niben101scf00317_273861-282692' '(at4g16650 : 764.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G76270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66790 : 520.0) no description available & (reliability: 1528.0) & (original description: Putative axi 1, Description = Axi 1 protein, PFAM = PF10250)' T '35.2' 'not assigned.unknown' 'niben101scf00317_274047-282611' '(at4g16650 : 734.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G76270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66790 : 518.0) no description available & (reliability: 1468.0) & (original description: Putative axi 1, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T '35.2' 'not assigned.unknown' 'niben101scf00317_948794-951534' ' no hits & (original description: Putative , Description = , PFAM = PF00011)' T '35.2' 'not assigned.unknown' 'niben101scf00317_951535-955005' ' no hits & (original description: Putative , Description = , PFAM = PF00403)' T '35.2' 'not assigned.unknown' 'niben101scf00317_957281-960066' '(at4g16530 : 114.0) Family of unknown function (DUF577); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF577 (InterPro:IPR007598); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF577) (TAIR:AT5G37410.1); Has 736 Blast hits to 673 proteins in 194 species: Archae - 0; Bacteria - 81; Metazoa - 201; Fungi - 106; Plants - 128; Viruses - 0; Other Eukaryotes - 220 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative dl4290w, Description = BnaA03g42670D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00317_1048690-1060611' ' no hits & (original description: Putative ddx59, Description = Probable ATP-dependent RNA helicase DDX59, PFAM = PF04438)' T '35.2' 'not assigned.unknown' 'niben101scf00317_1069443-1149376' '(at5g47580 : 645.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1290.0) & (original description: Putative dl4660w, Description = Putative uncharacterized protein AT4g17250, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00317_1152014-1154190' '(at2g35736 : 88.6) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25225.1). & (reliability: 177.2) & (original description: Putative At2g35736, Description = Putative uncharacterized protein At2g35736, PFAM = PF15054)' T '35.2' 'not assigned.unknown' 'niben101scf00318_297746-301302' ' no hits & (original description: Putative FGENESH1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00318_298919-301567' ' no hits & (original description: Putative FGENESH1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf00318_669142-678814' '(at1g67960 : 617.0) CONTAINS InterPro DOMAIN/s: Membrane protein,Tapt1/CMV receptor (InterPro:IPR008010); Has 447 Blast hits to 428 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 190; Fungi - 133; Plants - 49; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|68899 : 363.0) no description available & (gnl|cdd|37701 : 188.0) no description available & (reliability: 1234.0) & (original description: Putative POD1, Description = Protein POLLEN DEFECTIVE IN GUIDANCE 1, PFAM = PF05346)' T '35.2' 'not assigned.unknown' 'niben101scf00319_63346-74165' '(at5g10010 : 354.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64910.1); Has 33260 Blast hits to 16857 proteins in 1270 species: Archae - 88; Bacteria - 3040; Metazoa - 11915; Fungi - 3137; Plants - 1371; Viruses - 424; Other Eukaryotes - 13285 (source: NCBI BLink). & (reliability: 708.0) & (original description: Putative BnaC09g46690D, Description = BnaC09g46690D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00320_84514-88402' ' no hits & (original description: Putative , Description = Tumor-related protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00320_184746-187195' '(at4g27745 : 144.0) Yippee family putative zinc-binding protein; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: Yippee family putative zinc-binding protein (TAIR:AT5G53940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38609 : 134.0) no description available & (gnl|cdd|66871 : 134.0) no description available & (p59234|yipl_soltu : 106.0) Protein yippee-like - Solanum tuberosum (Potato) & (reliability: 288.0) & (original description: Putative ypel1, Description = Protein yippee-like, PFAM = PF03226)' T '35.2' 'not assigned.unknown' 'niben101scf00321_7644-9817' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00321_114473-116877' ' no hits & (original description: Putative PGSC0003DMG400025804, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00321_164261-168951' ' no hits & (original description: Putative , Description = , PFAM = PF15803;PF15805)' T '35.2' 'not assigned.unknown' 'niben101scf00321_200027-205172' '(at2g15730 : 523.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G34420.1); Has 149 Blast hits to 147 proteins in 26 species: Archae - 0; Bacteria - 31; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1046.0) & (original description: Putative PGSC0003DMG400025901, Description = Sulfotransferase, PFAM = PF00685)' T '35.2' 'not assigned.unknown' 'niben101scf00321_377089-382886' '(at5g66600 : 363.0) Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT2G23700.1). & (gnl|cdd|68359 : 187.0) no description available & (reliability: 726.0) & (original description: Putative At2g23700, Description = BnaA04g13840D protein, PFAM = PF04784;PF14389)' T '35.2' 'not assigned.unknown' 'niben101scf00322_2450-9725' '(at2g35680 : 335.0) Phosphotyrosine protein phosphatases superfamily protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, protein tyrosine/serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: Phosphotyrosine protein phosphatases superfamily protein (TAIR:AT5G56610.1); Has 1976 Blast hits to 1976 proteins in 288 species: Archae - 41; Bacteria - 150; Metazoa - 1097; Fungi - 157; Plants - 204; Viruses - 23; Other Eukaryotes - 304 (source: NCBI BLink). & (gnl|cdd|36931 : 249.0) no description available & (gnl|cdd|29029 : 88.8) no description available & (reliability: 670.0) & (original description: Putative DSP8, Description = Putative dual specificity protein phosphatase DSP8, PFAM = PF00782)' T '35.2' 'not assigned.unknown' 'niben101scf00324_58459-61589' '(at4g23890 : 211.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3252 (InterPro:IPR021659); Has 287 Blast hits to 287 proteins in 81 species: Archae - 0; Bacteria - 118; Metazoa - 12; Fungi - 6; Plants - 40; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative ndhS, Description = BnaCnng71720D protein, PFAM = PF11623)' T '35.2' 'not assigned.unknown' 'niben101scf00324_125140-127871' '(at4g23890 : 214.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3252 (InterPro:IPR021659); Has 287 Blast hits to 287 proteins in 81 species: Archae - 0; Bacteria - 118; Metazoa - 12; Fungi - 6; Plants - 40; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative ndhS, Description = NAD(P)H-quinone oxidoreductase subunit S, chloroplastic, PFAM = PF11623)' T '35.2' 'not assigned.unknown' 'niben101scf00324_163527-173029' '(at5g53440 : 186.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative PGSC0003DMG400012278, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00326_151225-157334' '(at4g17240 : 184.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages. & (reliability: 368.0) & (original description: Putative dl4655c, Description = Putative uncharacterized protein AT4g17240, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00327_269410-282532' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00328_47785-50985' '(at1g05440 : 241.0) C-8 sterol isomerases; FUNCTIONS IN: C-8 sterol isomerase activity; INVOLVED IN: ergosterol biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ERG2/sigma1 receptor-like (InterPro:IPR006716); Has 118 Blast hits to 118 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 4; Plants - 21; Viruses - 1; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative BnaC05g03520D, Description = BnaC05g03520D protein, PFAM = PF04622)' T '35.2' 'not assigned.unknown' 'niben101scf00328_111195-127478' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00328_217152-246904' '(at1g05410 : 409.0) Protein of unknown function (DUF1423); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423, plant (InterPro:IPR004082); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 818.0) & (original description: Putative BnaC05g03500D, Description = BnaC05g03500D protein, PFAM = PF07227)' T '35.2' 'not assigned.unknown' 'niben101scf00328_385205-410620' '(at3g22520 : 170.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14840.1); Has 717 Blast hits to 703 proteins in 179 species: Archae - 14; Bacteria - 134; Metazoa - 141; Fungi - 74; Plants - 209; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative BnaA01g24650D, Description = BnaA01g24650D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00328_502641-505285' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00328_712042-714665' ' no hits & (original description: Putative OFP11, Description = AtOFP11, PFAM = PF04844)' T '35.2' 'not assigned.unknown' 'niben101scf00328_829755-832297' '(at4g14870 : 82.8) Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid.; secE/sec61-gamma protein transport protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, protein secretion, protein targeting; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein secE/sec61-gamma protein (InterPro:IPR001901), SecE subunit of protein translocation complex (InterPro:IPR005807); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative SECE1, Description = Preprotein translocase subunit SECE1, PFAM = PF00584)' T '35.2' 'not assigned.unknown' 'niben101scf00332_68925-75606' '(at1g09195 : 432.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Ppx/GppA phosphatase (InterPro:IPR003695). & (gnl|cdd|30597 : 259.0) no description available & (reliability: 864.0) & (original description: Putative ppx, Description = Ppx-GppA phosphatase protein (Exopolyphosphatase), PFAM = PF02541)' T '35.2' 'not assigned.unknown' 'niben101scf00332_235466-242894' '(at3g58650 : 275.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26910.1); Has 2350 Blast hits to 1412 proteins in 248 species: Archae - 0; Bacteria - 487; Metazoa - 577; Fungi - 236; Plants - 184; Viruses - 4; Other Eukaryotes - 862 (source: NCBI BLink). & (reliability: 550.0) & (original description: Putative , Description = , PFAM = PF14309;PF14383)' T '35.2' 'not assigned.unknown' 'niben101scf00332_398333-401505' '(at3g62630 : 207.0) Protein of unknown function (DUF1645); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT2G15760.1); Has 309 Blast hits to 289 proteins in 68 species: Archae - 3; Bacteria - 16; Metazoa - 56; Fungi - 10; Plants - 169; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative PGSC0003DMG400045409, Description = , PFAM = PF07816)' T '35.2' 'not assigned.unknown' 'niben101scf00332_564471-569065' ' no hits & (original description: Putative PGSC0003DMG400015499, Description = OSJNBb0061C13.7 protein, PFAM = PF11779)' T '35.2' 'not assigned.unknown' 'niben101scf00332_721337-728343' '(at2g24100 : 199.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30780.1); Has 101 Blast hits to 101 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative , Description = ATP-dependent DNA helicase pcrA, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00332_827325-847109' '(at1g56423 : 231.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative Sb01g037490, Description = Putative uncharacterized protein Sb01g037490, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00332_1257920-1260506' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00332_1365757-1368451' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00337_176017-209936' ' no hits & (original description: Putative , Description = Protein bicaudal C isogeny 1, PFAM = PF07647)' T '35.2' 'not assigned.unknown' 'niben101scf00338_533669-536006' ' no hits & (original description: Putative , Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00338_666943-669455' ' no hits & (original description: Putative PGSC0003DMG400015206, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00338_845871-854350' '(at1g17820 : 536.0) Putative integral membrane protein conserved region (DUF2404); FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2404, transmembrane (InterPro:IPR019411), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Putative integral membrane protein conserved region (DUF2404) (TAIR:AT1G73200.1); Has 588 Blast hits to 406 proteins in 156 species: Archae - 0; Bacteria - 7; Metazoa - 150; Fungi - 264; Plants - 48; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (gnl|cdd|37449 : 330.0) no description available & (reliability: 1072.0) & (original description: Putative At1g17820, Description = At1g17820, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00338_971723-975204' '(at1g73350 : 114.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative PGSC0003DMG400015277, Description = Ankyrin repeat domain-containing protein 50 isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00338_1116793-1120420' '(at4g39630 : 184.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative TCM_001216, Description = Translation initiation factor IF-2, putative isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00339_4934-7743' ' no hits & (original description: Putative , Description = , PFAM = PF07816)' T '35.2' 'not assigned.unknown' 'niben101scf00339_45190-49203' ' no hits & (original description: Putative , Description = , PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben101scf00339_842212-861434' '(at3g28760 : 461.0) CONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase, prokaryotic-type (InterPro:IPR002812); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85797 : 379.0) no description available & (reliability: 922.0) & (original description: Putative aroB, Description = 3-dehydroquinate synthase, PFAM = PF01959)' T '35.2' 'not assigned.unknown' 'niben101scf00339_1003206-1006779' ' no hits & (original description: Putative PRE5, Description = Transcription factor PRE5, PFAM = PF00010)' T '35.2' 'not assigned.unknown' 'niben101scf00339_1053821-1070283' '(at3g55160 : 2211.0) unknown protein; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2428, death-receptor-like (InterPro:IPR019442); Has 357 Blast hits to 330 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 118; Plants - 50; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|37021 : 542.0) no description available & (gnl|cdd|35102 : 94.4) no description available & (reliability: 4422.0) & (original description: Putative , Description = , PFAM = PF10350)' T '35.2' 'not assigned.unknown' 'niben101scf00340_337364-347537' '(at1g51130 : 335.0) Nse4, component of Smc5/6 DNA repair complex; CONTAINS InterPro DOMAIN/s: Nse4 (InterPro:IPR014854); BEST Arabidopsis thaliana protein match is: Nse4, component of Smc5/6 DNA repair complex (TAIR:AT3G20760.1); Has 297 Blast hits to 295 proteins in 132 species: Archae - 0; Bacteria - 0; Metazoa - 72; Fungi - 132; Plants - 74; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|38077 : 183.0) no description available & (gnl|cdd|72167 : 108.0) no description available & (reliability: 670.0) & (original description: Putative NSE4A, Description = Non-structural maintenance of chromosomes element 4 homolog A, PFAM = PF08743)' T '35.2' 'not assigned.unknown' 'niben101scf00340_524711-527681' ' no hits & (original description: Putative gGmpm9, Description = Maturation protein, PFAM = PF03760)' T '35.2' 'not assigned.unknown' 'niben101scf00340_745296-753984' '(at5g14240 : 301.0) Thioredoxin superfamily protein; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); Has 1075 Blast hits to 1075 proteins in 388 species: Archae - 0; Bacteria - 2; Metazoa - 646; Fungi - 206; Plants - 103; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|38380 : 242.0) no description available & (gnl|cdd|48537 : 237.0) no description available & (reliability: 602.0) & (original description: Putative Sb03g003460, Description = Putative uncharacterized protein Sb03g003460, PFAM = PF02114)' T '35.2' 'not assigned.unknown' 'niben101scf00341_272723-281218' '(at5g55660 : 179.0) DEK domain-containing chromatin associated protein; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: DEK domain-containing chromatin associated protein (TAIR:AT4G26630.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37477 : 96.4) no description available & (reliability: 358.0) & (original description: Putative PGSC0003DMG400022282, Description = Protein DEK, PFAM = PF08766)' T '35.2' 'not assigned.unknown' 'niben101scf00341_501570-921055' ' no hits & (original description: Putative PGSC0003DMG400022174, Description = UPA24, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00341_682469-685233' ' no hits & (original description: Putative PGSC0003DMG401022285, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00343_428535-430879' ' no hits & (original description: Putative orf115, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00348_457044-459930' '(at3g09050 : 226.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 120 Blast hits to 120 proteins in 47 species: Archae - 4; Bacteria - 10; Metazoa - 33; Fungi - 2; Plants - 44; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative Sb03g040140, Description = Putative uncharacterized protein Sb03g040140, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00350_298658-308503' ' no hits & (original description: Putative F383_04392, Description = DNA-directed RNA polymerase subunit beta, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00350_609115-612296' ' no hits & (original description: Putative , Description = , PFAM = PF00646)' T '35.2' 'not assigned.unknown' 'niben101scf00352_417454-420423' '(at1g09157 : 226.0) Protein of unknown function (DUF679); LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF679 (InterPro:IPR007770); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF679) (TAIR:AT5G39650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68643 : 191.0) no description available & (reliability: 452.0) & (original description: Putative Sb10g008180, Description = Putative uncharacterized protein Sb10g008180, PFAM = PF05078)' T '35.2' 'not assigned.unknown' 'niben101scf00354_17376-20578' ' no hits & (original description: Putative glysoja_044932, Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00354_17448-20647' ' no hits & (original description: Putative glysoja_007451, Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00354_17946-20596' ' no hits & (original description: Putative glysoja_044932, Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00355_86523-96660' '(at3g06670 : 665.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF625 (InterPro:IPR006887); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49390.1). & (gnl|cdd|37386 : 306.0) no description available & (gnl|cdd|86726 : 172.0) no description available & (reliability: 1330.0) & (original description: Putative LOC100502168, Description = Suppressor of Mek1, PFAM = PF04802)' T '35.2' 'not assigned.unknown' 'niben101scf00361_508449-529424' ' no hits & (original description: Putative PGSC0003DMG400021755, Description = Putative E3 ubiquitin-protein ligase RBBP6-like, PFAM = PF08783;PF13923)' T '35.2' 'not assigned.unknown' 'niben101scf00361_520973-524647' ' no hits & (original description: Putative ORF52, Description = DWNN domain-containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00366_893049-911914' '(at1g24265 : 216.0) Protein of unknown function (DUF1664); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1664 (InterPro:IPR012458); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1664) (TAIR:AT1G24267.1). & (gnl|cdd|71327 : 152.0) no description available & (reliability: 432.0) & (original description: Putative bZIP56, Description = BZIP transcription factor bZIP56, PFAM = PF07889)' T '35.2' 'not assigned.unknown' 'niben101scf00366_1089459-1092316' '(at1g67330 : 329.0) Protein of unknown function (DUF579); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, 4 leaf senescence stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF579 (InterPro:IPR021148), Conserved hypothetical protein CHP01627 (InterPro:IPR006514); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF579) (TAIR:AT1G27930.1); Has 252 Blast hits to 251 proteins in 20 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 240; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|68247 : 312.0) no description available & (reliability: 658.0) & (original description: Putative At1g27930, Description = Probable methyltransferase At1g27930, PFAM = PF04669)' T '35.2' 'not assigned.unknown' 'niben101scf00367_202213-205680' '(at3g25400 : 161.0) CONTAINS InterPro DOMAIN/s: NTP Pyrophosphohydrolase MazG-related, RS21-C6 (InterPro:IPR011394), EAR (InterPro:IPR009039), NTP pyrophosphohydrolase MazG, putative catalytic core (InterPro:IPR004518); Has 1123 Blast hits to 1121 proteins in 452 species: Archae - 22; Bacteria - 753; Metazoa - 81; Fungi - 3; Plants - 83; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative CDA03, Description = Nucleotide pyrophosphohydrolase, PFAM = PF12643)' T '35.2' 'not assigned.unknown' 'niben101scf00367_564565-567032' '(at3g23440 : 81.6) EMBRYO SAC DEVELOPMENT ARREST 6 (EDA6); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44060.1); Has 61 Blast hits to 61 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative PGSC0003DMG400042837, Description = Embryo sac development arrest 6, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00367_852180-856188' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00369_862664-870416' '(at5g27710 : 405.0) unknown protein; Has 49 Blast hits to 49 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 810.0) & (original description: Putative BnaC09g03280D, Description = BnaC09g03280D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00369_1860670-1864757' ' no hits & (original description: Putative , Description = Pectinesterase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00369_1970172-1977588' '(at1g56230 : 750.0) Protein of unknown function (DUF1399); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1399 (InterPro:IPR009836); BEST Arabidopsis thaliana protein match is: Protein of unknown function (duplicated DUF1399) (TAIR:AT2G22660.2). & (gnl|cdd|70629 : 123.0) no description available & (reliability: 1500.0) & (original description: Putative Sb03g013780, Description = Putative uncharacterized protein Sb03g013780, PFAM = PF07173;PF07173)' T '35.2' 'not assigned.unknown' 'niben101scf00369_2547408-2550457' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00370_408006-411285' '(at3g06035 : 163.0) Glycoprotein membrane precursor GPI-anchored; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Glycoprotein membrane precursor GPI-anchored (TAIR:AT5G19250.1); Has 86 Blast hits to 85 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative BnaAnng13320D, Description = BnaAnng13320D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00370_496971-506373' '(at1g54920 : 237.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages. & (reliability: 474.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00371_173565-177197' '(at1g52910 : 212.0) Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT3G15480.1); Has 528 Blast hits to 528 proteins in 99 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 528; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70227 : 119.0) no description available & (reliability: 424.0) & (original description: Putative 1G01, Description = Putative uncharacterized protein 1G01, PFAM = PF06749)' T '35.2' 'not assigned.unknown' 'niben101scf00372_11467-13781' ' no hits & (original description: Putative PI-4, Description = Proteinase inhibitor, PFAM = PF00280)' T '35.2' 'not assigned.unknown' 'niben101scf00372_183460-185852' ' no hits & (original description: Putative orf131c, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00372_189188-192708' '(at3g19120 : 521.0) PIF / Ping-Pong family of plant transposases; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12010.1); Has 644 Blast hits to 642 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 379; Fungi - 49; Plants - 189; Viruses - 3; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|39785 : 191.0) no description available & (reliability: 1042.0) & (original description: Putative , Description = , PFAM = PF13359)' T '35.2' 'not assigned.unknown' 'niben101scf00372_354321-360294' ' no hits & (original description: Putative PGSC0003DMG400010668, Description = Putative ovule protein, PFAM = PF02362)' T '35.2' 'not assigned.unknown' 'niben101scf00378_503764-506126' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00380_262628-271345' '(at4g16146 : 100.0) cAMP-regulated phosphoprotein 19-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: cAMP-regulated phosphoprotein/endosulphine conserved region (InterPro:IPR006760); BEST Arabidopsis thaliana protein match is: cAMP-regulated phosphoprotein 19-related protein (TAIR:AT1G69510.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71283 : 90.2) no description available & (reliability: 200.0) & (original description: Putative PGSC0003DMG400000191, Description = cAMP-regulated phosphoprotein-like protein, PFAM = PF04667)' T '35.2' 'not assigned.unknown' 'niben101scf00380_417660-428754' '(at4g16144 : 586.0) Encodes AMSH3, a deubiquitinating enzyme that hydrolyzes K48- and K63-linked ubiquitin chains in vitro. Required for intracellular trafficking and vacuole biogenesis.; associated molecule with the SH3 domain of STAM 3 (AMSH3); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: associated molecule with the SH3 domain of STAM 1 (TAIR:AT1G48790.1); Has 901 Blast hits to 707 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 373; Fungi - 228; Plants - 224; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (gnl|cdd|38091 : 337.0) no description available & (gnl|cdd|85425 : 83.5) no description available & (reliability: 1172.0) & (original description: Putative AMSH3, Description = AMSH-like ubiquitin thioesterase 3, PFAM = PF01398;PF08969)' T '35.2' 'not assigned.unknown' 'niben101scf00381_25929-37253' '(at5g65950 : 1342.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1683, C-terminal (InterPro:IPR012880), Foie gras liver health family 1 (InterPro:IPR021773); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71356 : 131.0) no description available & (reliability: 2684.0) & (original description: Putative , Description = Ribose-phosphate pyrophosphokinase 4, PFAM = PF11817;PF12742)' T '35.2' 'not assigned.unknown' 'niben101scf00383_240731-243483' '(at5g66440 : 116.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative PGSC0003DMG400003523, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00383_255412-258790' ' no hits & (original description: Putative POPTR_0007s13270g, Description = Heavy-metal-associated domain-containing family protein, PFAM = PF00403)' T '35.2' 'not assigned.unknown' 'niben101scf00383_478635-481548' ' no hits & (original description: Putative TAS14, Description = Abscisic acid and environmental stress-inducible protein TAS14, PFAM = PF00257)' T '35.2' 'not assigned.unknown' 'niben101scf00383_501002-503707' ' no hits & (original description: Putative dhn1, Description = Dehydrin/response ABA, PFAM = PF00257)' T '35.2' 'not assigned.unknown' 'niben101scf00388_583196-591265' '(at3g49720 : 325.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 650.0) & (original description: Putative At3g49720, Description = Uncharacterized protein At3g49720, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00390_80541-92777' '(at5g38720 : 159.0) unknown protein; Has 13419 Blast hits to 9093 proteins in 698 species: Archae - 38; Bacteria - 1038; Metazoa - 4949; Fungi - 1086; Plants - 485; Viruses - 44; Other Eukaryotes - 5779 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative PGSC0003DMG400010100, Description = Ribosomal RNA-processing protein, PFAM = PF12923)' T '35.2' 'not assigned.unknown' 'niben101scf00390_451082-456101' '(at5g15900 : 447.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 19 (TBL19); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 21 (TAIR:AT5G15890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|72785 : 118.0) no description available & (reliability: 894.0) & (original description: Putative Sb10g009920, Description = Putative uncharacterized protein Sb10g009920, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf00390_467598-471972' '(at5g15900 : 464.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 19 (TBL19); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 21 (TAIR:AT5G15890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|72785 : 126.0) no description available & (reliability: 928.0) & (original description: Putative TBL19, Description = Protein trichome birefringence-like 19, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf00390_475345-486502' '(at5g15900 : 468.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 19 (TBL19); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 21 (TAIR:AT5G15890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|72785 : 120.0) no description available & (reliability: 936.0) & (original description: Putative AXY4L, Description = Leaf senescence protein-like, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf00390_586581-597123' '(at5g21970 : 468.0) Ubiquitin carboxyl-terminal hydrolase family protein; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant (InterPro:IPR021099); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein (TAIR:AT4G01037.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 936.0) & (original description: Putative TCM_037418, Description = Ubiquitin carboxyl-terminal hydrolase family protein, PFAM = PF11955)' T '35.2' 'not assigned.unknown' 'niben101scf00391_249088-251935' ' no hits & (original description: Putative PGSC0003DMG400001033, Description = , PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'niben101scf00395_310999-318770' '(at5g01660 : 586.0) CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G11000.1); Has 16133 Blast hits to 7053 proteins in 482 species: Archae - 40; Bacteria - 1227; Metazoa - 10756; Fungi - 311; Plants - 1896; Viruses - 673; Other Eukaryotes - 1230 (source: NCBI BLink). & (gnl|cdd|39642 : 222.0) no description available & (p37707|b2_dauca : 105.0) B2 protein - Daucus carota (Carrot) & (reliability: 1172.0) & (original description: Putative BnaA10g27670D, Description = BnaA10g27670D protein, PFAM = PF10539;PF01344;PF01344;PF01344;PF01344)' T '35.2' 'not assigned.unknown' 'niben101scf00397_123865-134491' '(at2g45060 : 231.0) Uncharacterised conserved protein UCP022280; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022280 (InterPro:IPR016803); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP022280 (TAIR:AT4G26410.1); Has 86 Blast hits to 86 proteins in 26 species: Archae - 0; Bacteria - 7; Metazoa - 5; Fungi - 2; Plants - 71; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative At2g45060, Description = At2g45060/T14P1.13, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00397_125973-134536' '(at2g45060 : 149.0) Uncharacterised conserved protein UCP022280; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022280 (InterPro:IPR016803); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP022280 (TAIR:AT4G26410.1); Has 86 Blast hits to 86 proteins in 26 species: Archae - 0; Bacteria - 7; Metazoa - 5; Fungi - 2; Plants - 71; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative At2g45060, Description = At2g45060/T14P1.13, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00398_34570-36965' ' no hits & (original description: Putative rrn18, Description = Putative uncharacterized protein orf111-b, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00398_725049-727564' ' no hits & (original description: Putative PGSC0003DMG400021310, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00398_758005-761275' '(q8lhp0|elof1_orysa : 130.0) Transcription elongation factor 1 homolog - Oryza sativa (Rice) & (at5g46030 : 121.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF701, zinc-binding putative (InterPro:IPR007808); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38424 : 108.0) no description available & (gnl|cdd|34497 : 84.7) no description available & (reliability: 242.0) & (original description: Putative Os07g0631100, Description = Transcription elongation factor 1 homolog, PFAM = PF05129)' T '35.2' 'not assigned.unknown' 'niben101scf00401_116031-118519' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00402_112940-118763' '(at5g26770 : 264.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05830.1); Has 26484 Blast hits to 16065 proteins in 1382 species: Archae - 343; Bacteria - 2653; Metazoa - 15273; Fungi - 2108; Plants - 1148; Viruses - 36; Other Eukaryotes - 4923 (source: NCBI BLink). & (reliability: 528.0) & (original description: Putative BnaC07g28570D, Description = BnaC07g28570D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00402_253226-257342' ' no hits & (original description: Putative PGSC0003DMG400010287, Description = Polypepetide with reverse transcriptase and RNaseH domains, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00402_256900-259329' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF14244)' T '35.2' 'not assigned.unknown' 'niben101scf00404_99207-105782' '(at1g11170 : 495.0) Protein of unknown function (DUF707); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G61240.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68772 : 317.0) no description available & (reliability: 990.0) & (original description: Putative At1g11170, Description = At1g11170/T28P6_16, PFAM = PF05212)' T '35.2' 'not assigned.unknown' 'niben101scf00408_1072750-1083539' ' no hits & (original description: Putative RRC1, Description = U2 snRNP-associated SURP motif-containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00410_233789-243573' ' no hits & (original description: Putative , Description = Gamma-tubulin complex component, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00411_105738-126294' '(at5g06590 : 209.0) unknown protein; Has 38 Blast hits to 38 proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 418.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00412_1482-5976' '(at5g63480 : 95.9) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative MED30, Description = Mediator of RNA polymerase II transcription subunit 30, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00412_149449-160507' '(at2g24970 : 158.0) unknown protein; Has 33 Blast hits to 33 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative At2g24970, Description = At2g24970, PFAM = PF16740)' T '35.2' 'not assigned.unknown' 'niben101scf00414_81749-85140' ' no hits & (original description: Putative PGSC0003DMG400008693, Description = Putative WPP domain-interacting protein 2-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00414_82765-90435' '(at5g56210 : 84.0) WPP domain interacting protein 2 (WIP2); BEST Arabidopsis thaliana protein match is: WPP domain interacting protein 1 (TAIR:AT4G26455.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative PGSC0003DMG400029886, Description = Putative WPP domain-interacting protein 2-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00414_475890-478914' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00414_854025-858089' '(at5g55960 : 697.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0118 (InterPro:IPR002549); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37576 : 440.0) no description available & (reliability: 1394.0) & (original description: Putative BnaA10g10060D, Description = BnaA10g10060D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00415_212198-468122' ' no hits & (original description: Putative PGSC0003DMG400045123, Description = Zinc finger containing preotein, putative, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben101scf00418_283699-286028' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00419_29134-31541' ' no hits & (original description: Putative orf136, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00420_548926-567428' '(at3g04310 : 82.4) unknown protein; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative PGSC0003DMG402028717, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00422_79843-82269' ' no hits & (original description: Putative , Description = , PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben101scf00422_185901-189562' ' no hits & (original description: Putative xl2, Description = Putative uncharacterized protein xl2, PFAM = PF05251)' T '35.2' 'not assigned.unknown' 'niben101scf00425_286541-292538' '(at1g74830 : 389.0) Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT1G18990.1); Has 3601 Blast hits to 3088 proteins in 462 species: Archae - 26; Bacteria - 544; Metazoa - 962; Fungi - 241; Plants - 560; Viruses - 41; Other Eukaryotes - 1227 (source: NCBI BLink). & (gnl|cdd|68159 : 122.0) no description available & (reliability: 778.0) & (original description: Putative MYOB6, Description = Probable myosin-binding protein 6, PFAM = PF04576)' T '35.2' 'not assigned.unknown' 'niben101scf00426_77474-81124' '(gnl|cdd|68298 : 185.0) no description available & (at1g62420 : 137.0) Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT1G12030.1); Has 389 Blast hits to 387 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 387; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative , Description = , PFAM = PF04720)' T '35.2' 'not assigned.unknown' 'niben101scf00426_252389-258505' '(at5g47635 : 118.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT2G40113.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative TCM_030436, Description = Pollen Ole e 1 allergen and extensin family protein, putative, PFAM = PF01190)' T '35.2' 'not assigned.unknown' 'niben101scf00428_198274-201278' '(at5g63100 : 336.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G44600.1); Has 163 Blast hits to 163 proteins in 58 species: Archae - 2; Bacteria - 69; Metazoa - 2; Fungi - 2; Plants - 84; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 672.0) & (original description: Putative At5g63100, Description = S-adenosyl-L-methionine-dependent methyltransferase domain-containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00428_833885-836163' ' (original description: Putative LTP, Description = Lipid transfer protein, PFAM = PF14368)' T '35.2' 'not assigned.unknown' 'niben101scf00428_1248119-1250747' ' no hits & (original description: Putative PGSC0003DMG400026255, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00428_1468366-1470794' ' no hits & (original description: Putative PGSC0003DMG400024162, Description = Methionine rich arabinogalactan, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00428_1668182-1671797' ' no hits & (original description: Putative At4g17010, Description = Os02g0494600 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00430_166812-171552' '(gnl|cdd|39815 : 152.0) no description available & (at1g77350 : 119.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function KRTCAP2 (InterPro:IPR018614); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative pco153932, Description = Keratinocytes-associated protein 2, PFAM = PF09775)' T '35.2' 'not assigned.unknown' 'niben101scf00435_5597-20839' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00436_40780-45014' '(at5g04320 : 83.2) Shugoshin C terminus; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: meiotic chromosome segregation; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Shugoshin, C-terminal (InterPro:IPR011515); BEST Arabidopsis thaliana protein match is: Shugoshin C terminus (TAIR:AT3G10440.1); Has 2871 Blast hits to 2420 proteins in 372 species: Archae - 12; Bacteria - 318; Metazoa - 1409; Fungi - 181; Plants - 120; Viruses - 4; Other Eukaryotes - 827 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative PGSC0003DMG400000414, Description = At5g04320, PFAM = PF07557)' T '35.2' 'not assigned.unknown' 'niben101scf00436_259535-262556' '(gnl|cdd|71235 : 169.0) no description available & (at5g22930 : 132.0) Protein of unknown function (DUF1635); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1635 (InterPro:IPR012862); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1635) (TAIR:AT3G44940.1); Has 97 Blast hits to 97 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative At5g22930, Description = Emb}, PFAM = PF07795)' T '35.2' 'not assigned.unknown' 'niben101scf00436_370088-375421' '(at2g28150 : 434.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF966 (InterPro:IPR010369), Uncharacterised conserved protein UCP031043 (InterPro:IPR021182); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF966) (TAIR:AT5G59790.1); Has 2510 Blast hits to 686 proteins in 184 species: Archae - 0; Bacteria - 433; Metazoa - 315; Fungi - 216; Plants - 186; Viruses - 4; Other Eukaryotes - 1356 (source: NCBI BLink). & (gnl|cdd|69644 : 335.0) no description available & (reliability: 868.0) & (original description: Putative At2g28150, Description = Putative uncharacterized protein At2g28150, PFAM = PF06136)' T '35.2' 'not assigned.unknown' 'niben101scf00437_17355-21877' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00438_221705-223858' ' no hits & (original description: Putative orf274, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00438_261858-264247' ' no hits & (original description: Putative orf130a, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00439_433306-435865' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00439_654935-658563' '(at5g12010 : 592.0) unknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39785 : 228.0) no description available & (reliability: 1184.0) & (original description: Putative Sb03g026050, Description = Putative uncharacterized protein Sb03g026050, PFAM = PF13359)' T '35.2' 'not assigned.unknown' 'niben101scf00442_130947-133220' '(at5g50011 : 85.5) Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF37 represents a conserved upstream opening reading frame relative to major ORF AT5G50010.1; conserved peptide upstream open reading frame 37 (CPuORF37); BEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 43 (TAIR:AT5G09461.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00442_1039982-1115824' ' no hits & (original description: Putative arg, Description = Putative arabinogalactan-protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00445_11686-14268' ' no hits & (original description: Putative , Description = , PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben101scf00446_235600-241016' '(at4g27620 : 258.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27610.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 516.0) & (original description: Putative At4g27620, Description = At4g27620, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00447_51679-54043' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00447_282556-285464' '(gnl|cdd|70178 : 217.0) no description available & (at4g01140 : 158.0) Protein of unknown function (DUF1191); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, leaf whorl, root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1191 (InterPro:IPR010605); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1191) (TAIR:AT4G23720.1); Has 115 Blast hits to 115 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative PGSC0003DMG400000087, Description = Atpob1, putative, PFAM = PF06697)' T '35.2' 'not assigned.unknown' 'niben101scf00448_1541690-1544472' ' no hits & (original description: Putative Os10g0106900, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf00448_1732905-1735253' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00449_138330-142067' ' no hits & (original description: Putative F383_28306, Description = Argininosuccinate lyase, PFAM = PF09713)' T '35.2' 'not assigned.unknown' 'niben101scf00449_574530-576637' ' no hits & (original description: Putative OST4A, Description = Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A, PFAM = PF10215)' T '35.2' 'not assigned.unknown' 'niben101scf00449_726846-731519' ' no hits & (original description: Putative , Description = CASP-like protein, PFAM = PF04535)' T '35.2' 'not assigned.unknown' 'niben101scf00453_434376-437873' '(gnl|cdd|66792 : 229.0) no description available & (at3g50180 : 145.0) Plant protein of unknown function (DUF247); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: petiole, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50120.1); Has 18820 Blast hits to 10177 proteins in 649 species: Archae - 36; Bacteria - 1683; Metazoa - 7662; Fungi - 1574; Plants - 4386; Viruses - 842; Other Eukaryotes - 2637 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative PGSC0003DMG400008173, Description = DUF247 domain protein, PFAM = PF03140)' T '35.2' 'not assigned.unknown' 'niben101scf00454_188074-198133' '(at5g51180 : 481.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G25770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39573 : 289.0) no description available & (gnl|cdd|68625 : 226.0) no description available & (reliability: 962.0) & (original description: Putative Sb04g033050, Description = Putative uncharacterized protein Sb04g033050, PFAM = PF05057)' T '35.2' 'not assigned.unknown' 'niben101scf00457_199927-252207' '(at2g36810 : 2404.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); Has 392 Blast hits to 295 proteins in 82 species: Archae - 0; Bacteria - 2; Metazoa - 305; Fungi - 6; Plants - 46; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|37243 : 189.0) no description available & (reliability: 4808.0) & (original description: Putative SGR6, Description = Protein SHOOT GRAVITROPISM 6, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00457_745394-748305' '(at3g59490 : 322.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 644.0) & (original description: Putative , Description = , PFAM = PF14953)' T '35.2' 'not assigned.unknown' 'niben101scf00457_909553-913831' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00457_910642-912671' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00457_912672-916101' ' no hits & (original description: Putative PGSC0003DMG400037565, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00457_1092179-1100469' '(at5g27730 : 537.0) Protein of unknown function (DUF1624); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1624 (InterPro:IPR012429); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1624) (TAIR:AT5G47900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39881 : 422.0) no description available & (gnl|cdd|34021 : 129.0) no description available & (reliability: 1074.0) & (original description: Putative Sb05g006970, Description = Putative uncharacterized protein Sb05g006970, PFAM = PF07786)' T '35.2' 'not assigned.unknown' 'niben101scf00457_1134363-1161527' ' no hits & (original description: Putative PGSC0003DMG400003867, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00460_63762-66556' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00460_313149-326233' ' no hits & (original description: Putative , Description = Gamma-tubulin complex component, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00460_317651-320082' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF04937)' T '35.2' 'not assigned.unknown' 'niben101scf00460_542628-592013' '(at5g06350 : 508.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G27010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37360 : 98.8) no description available & (reliability: 1016.0) & (original description: Putative , Description = , PFAM = PF12333)' T '35.2' 'not assigned.unknown' 'niben101scf00461_468363-471020' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf00465_83493-86123' ' no hits & (original description: Putative PGSC0003DMG400025104, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00465_189879-192218' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00465_403438-405851' ' no hits & (original description: Putative PGSC0003DMG401030716, Description = Putative egg cell-secreted protein 1.2-like, PFAM = PF05617)' T '35.2' 'not assigned.unknown' 'niben101scf00465_759888-763546' '(gnl|cdd|70353 : 278.0) no description available & (at1g13530 : 261.0) Protein of unknown function (DUF1262); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1262 (InterPro:IPR010683); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1262) (TAIR:AT1G13500.1); Has 101 Blast hits to 94 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 522.0) & (original description: Putative , Description = DUF1262 family protein, PFAM = PF06880)' T '35.2' 'not assigned.unknown' 'niben101scf00466_29272-32000' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00466_118639-120929' ' no hits & (original description: Putative At2g21290, Description = 30S ribosomal protein S31, mitochondrial, PFAM = PF17067)' T '35.2' 'not assigned.unknown' 'niben101scf00467_77462-86217' '(at3g04560 : 374.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 16 growth stages; Has 227 Blast hits to 225 proteins in 83 species: Archae - 0; Bacteria - 17; Metazoa - 98; Fungi - 29; Plants - 51; Viruses - 1; Other Eukaryotes - 31 (source: NCBI BLink). & (reliability: 748.0) & (original description: Putative PHYPADRAFT_168414, Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00470_332004-336677' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00470_429037-432697' ' no hits & (original description: Putative upa9, Description = Putative uncharacterized protein upa9, PFAM = PF06376)' T '35.2' 'not assigned.unknown' 'niben101scf00470_537657-541196' '(at2g46300 : 97.8) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01110.1); Has 504 Blast hits to 503 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 501; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 88.4) no description available & (reliability: 195.6) & (original description: Putative PGSC0003DMG400019400, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00471_70932-77566' '(at5g17660 : 256.0) tRNA (guanine-N-7) methyltransferase; FUNCTIONS IN: tRNA (guanine-N7-)-methyltransferase activity; INVOLVED IN: tRNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA (guanine-N-7) methyltransferase (InterPro:IPR003358); BEST Arabidopsis thaliana protein match is: tRNA (guanine-N-7) methyltransferase (TAIR:AT5G24840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80529 : 128.0) no description available & (reliability: 512.0) & (original description: Putative trmB, Description = tRNA (guanine-N(7)-)-methyltransferase, PFAM = PF02390)' T '35.2' 'not assigned.unknown' 'niben101scf00471_91699-95553' ' no hits & (original description: Putative MSB1, Description = Glycine and proline-rich protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00471_234660-238106' '(at5g17640 : 571.0) Protein of unknown function (DUF1005); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1005 (InterPro:IPR010410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1005) (TAIR:AT1G10020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|69725 : 238.0) no description available & (reliability: 1142.0) & (original description: Putative At4g29310, Description = Putative uncharacterized protein AT4g29310, PFAM = PF06219)' T '35.2' 'not assigned.unknown' 'niben101scf00472_237623-240007' ' no hits & (original description: Putative PGSC0003DMG400033092, Description = SRF-type transcription factor family protein, PFAM = PF00319)' T '35.2' 'not assigned.unknown' 'niben101scf00472_667375-671735' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00472_718561-723541' '(at4g24330 : 505.0) Protein of unknown function (DUF1682); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1682 (InterPro:IPR012879); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1682) (TAIR:AT5G49945.1); Has 377 Blast hits to 366 proteins in 149 species: Archae - 0; Bacteria - 16; Metazoa - 149; Fungi - 92; Plants - 46; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|37568 : 365.0) no description available & (gnl|cdd|71383 : 334.0) no description available & (reliability: 1010.0) & (original description: Putative At5g49945, Description = Uncharacterized protein At5g49945, PFAM = PF07946)' T '35.2' 'not assigned.unknown' 'niben101scf00472_798996-802260' '(at4g24320 : 343.0) Ubiquitin carboxyl-terminal hydrolase family protein; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant (InterPro:IPR021099); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein (TAIR:AT1G71850.1); Has 408 Blast hits to 402 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 408; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 686.0) & (original description: Putative TCM_006183, Description = Ubiquitin carboxyl-terminal hydrolase family protein, PFAM = PF11955)' T '35.2' 'not assigned.unknown' 'niben101scf00472_908183-911470' ' no hits & (original description: Putative , Description = , PFAM = PF06200;PF09425)' T '35.2' 'not assigned.unknown' 'niben101scf00473_24907-34170' '(at3g62140 : 153.0) CONTAINS InterPro DOMAIN/s: NEFA-interacting nuclear protein NIP30, N-terminal (InterPro:IPR019331); Has 398 Blast hits to 395 proteins in 139 species: Archae - 0; Bacteria - 6; Metazoa - 193; Fungi - 83; Plants - 36; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|39239 : 82.5) no description available & (reliability: 306.0) & (original description: Putative BnaC06g18360D, Description = BnaC06g18360D protein, PFAM = PF10187)' T '35.2' 'not assigned.unknown' 'niben101scf00474_171990-175793' ' no hits & (original description: Putative PGSC0003DMG400030842, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00474_224939-231385' '(at4g09060 : 226.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G14680.1). & (reliability: 452.0) & (original description: Putative BnaC03g28450D, Description = BnaC03g28450D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00474_493822-496217' ' no hits & (original description: Putative NtAGP1, Description = Arabinogalactan protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00474_631044-652120' '(at1g35220 : 1290.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 313 Blast hits to 185 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 200; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (gnl|cdd|38911 : 809.0) no description available & (reliability: 2580.0) & (original description: Putative Sb09g017090, Description = Putative uncharacterized protein Sb09g017090, PFAM = PF14647;PF14648;PF14648;PF14648)' T '35.2' 'not assigned.unknown' 'niben101scf00474_698014-708726' ' (original description: Putative qtrt1, Description = Queuine tRNA-ribosyltransferase, PFAM = PF01702)' T '35.2' 'not assigned.unknown' 'niben101scf00474_1414588-1417070' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00478_489831-494329' '(at4g31330 : 301.0) Protein of unknown function, DUF599; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF599 (InterPro:IPR006747); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF599 (TAIR:AT5G10580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68233 : 232.0) no description available & (reliability: 602.0) & (original description: Putative BnaC09g45960D, Description = BnaC09g45960D protein, PFAM = PF04654)' T '35.2' 'not assigned.unknown' 'niben101scf00479_255354-260932' '(at5g53900 : 387.0) Serine/threonine-protein kinase WNK (With No Lysine)-related; BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase WNK (With No Lysine)-related (TAIR:AT3G15240.2); Has 207 Blast hits to 205 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 774.0) & (original description: Putative WNK1, Description = Putative serine/threonine-protein kinase WNK (With no lysine)-related protein 1, PFAM = PF14215)' T '35.2' 'not assigned.unknown' 'niben101scf00480_160746-166645' '(at4g32480 : 159.0) Protein of unknown function (DUF506) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT2G20670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68298 : 155.0) no description available & (reliability: 318.0) & (original description: Putative , Description = , PFAM = PF04720)' T '35.2' 'not assigned.unknown' 'niben101scf00483_9227-11922' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00483_123915-127238' '(gnl|cdd|68298 : 151.0) no description available & (at1g77145 : 141.0) Protein of unknown function (DUF506) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT1G77160.1); Has 392 Blast hits to 390 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 390; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative glysoja_028213, Description = , PFAM = PF04720)' T '35.2' 'not assigned.unknown' 'niben101scf00483_244920-247294' ' no hits & (original description: Putative PGSC0003DMG400030777, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00483_336119-339449' ' (original description: Putative LTP1, Description = Lipid transfer protein 1, PFAM = PF14368)' T '35.2' 'not assigned.unknown' 'niben101scf00483_354186-357357' ' no hits & (original description: Putative , Description = , PFAM = PF00646)' T '35.2' 'not assigned.unknown' 'niben101scf00484_140310-142504' ' (original description: Putative RPS28, Description = 40S ribosomal protein S28, PFAM = PF01200)' T '35.2' 'not assigned.unknown' 'niben101scf00485_300610-303763' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00487_35899-74548' ' no hits & (original description: Putative Dif54, Description = Extensin-like protein Dif54, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00487_139271-143348' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00487_443384-463896' '(at5g18250 : 161.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative Os01g0264500, Description = Os01g0264500 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00487_756671-758986' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00488_732988-737334' '(at1g18990 : 281.0) Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT1G74830.1); Has 1377 Blast hits to 1217 proteins in 215 species: Archae - 6; Bacteria - 79; Metazoa - 450; Fungi - 121; Plants - 429; Viruses - 14; Other Eukaryotes - 278 (source: NCBI BLink). & (gnl|cdd|68159 : 119.0) no description available & (reliability: 562.0) & (original description: Putative MYOB2, Description = Zein-binding protein, PFAM = PF04576)' T '35.2' 'not assigned.unknown' 'niben101scf00490_165013-167992' '(gnl|cdd|70178 : 284.0) no description available & (at4g22900 : 234.0) Protein of unknown function (DUF1191); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1191 (InterPro:IPR010605); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1191) (TAIR:AT4G11950.1); Has 128 Blast hits to 128 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 6; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative BnaC07g37690D, Description = BnaC07g37690D protein, PFAM = PF06697)' T '35.2' 'not assigned.unknown' 'niben101scf00491_252436-255200' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00491_271134-275379' '(at3g25855 : 80.1) Copper transport protein family; Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative Ccrd_016313, Description = Heavy metal-associated domain, HMA, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00491_355241-362317' '(at3g18440 : 603.0) Belongs to the aluminum-activated malate transporter family. Encodes a vacuolar malate channel. Expressed in all parts of plants. Almost exclusively expressed in mesophyll cells of leaves.; aluminum-activated malate transporter 9 (ALMT9); CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G18420.1); Has 814 Blast hits to 808 proteins in 259 species: Archae - 0; Bacteria - 440; Metazoa - 0; Fungi - 20; Plants - 338; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|39909 : 460.0) no description available & (gnl|cdd|85194 : 171.0) no description available & (reliability: 1206.0) & (original description: Putative ALMT3, Description = Putative aluminum-activated malate transporter 3, PFAM = PF11744)' T '35.2' 'not assigned.unknown' 'niben101scf00492_228814-231173' ' no hits & (original description: Putative orf120b, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00493_143841-146299' ' no hits & (original description: Putative PGSC0003DMG400004859, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00494_40584-42883' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00494_857928-863868' '(at5g37478 : 116.0) TPX2 (targeting protein for Xklp2) protein family; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT3G01015.1); Has 159 Blast hits to 159 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 0; Plants - 142; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative MAP20, Description = Microtubule-associated protein, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'niben101scf00495_110295-112708' '(atmg00030 : 132.0) hypothetical protein; unknown protein. & (reliability: 264.0) & (original description: Putative orf138c, Description = Uncharacterized mitochondrial protein AtMg00030, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00495_122762-125337' ' no hits & (original description: Putative orf125g, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00495_319788-326264' '(at4g26190 : 195.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; CONTAINS InterPro DOMAIN/s: NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G36540.1); Has 27570 Blast hits to 17450 proteins in 1040 species: Archae - 84; Bacteria - 2677; Metazoa - 10403; Fungi - 2363; Plants - 1406; Viruses - 96; Other Eukaryotes - 10541 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative L484_018752, Description = Uncharacterized FCP1-like domain-containing protein, PFAM = PF03031)' T '35.2' 'not assigned.unknown' 'niben101scf00495_326807-335705' '(at3g26850 : 134.0) histone-lysine N-methyltransferases; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chromosome; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SRI, Set2 Rpb1 interacting (InterPro:IPR013257); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT3G18640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative Sb10g008980, Description = Putative uncharacterized protein Sb10g008980, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00501_251-6002' '(at4g14385 : 126.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf6 (InterPro:IPR015418); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72755 : 98.4) no description available & (reliability: 252.0) & (original description: Putative Os12g0298600, Description = Expressed protein, PFAM = PF09340)' T '35.2' 'not assigned.unknown' 'niben101scf00501_117295-119948' ' no hits & (original description: Putative , Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben101scf00501_349289-351873' '(gnl|cdd|68427 : 231.0) no description available & (at3g23290 : 222.0) LIGHT SENSITIVE HYPOCOTYLS 4 (LSH4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT2G31160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 444.0) & (original description: Putative LSH10, Description = Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10, PFAM = PF04852)' T '35.2' 'not assigned.unknown' 'niben101scf00503_151226-156699' '(at1g01430 : 484.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 25 (TBL25); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 26 (TAIR:AT4G01080.1); Has 1353 Blast hits to 1335 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 6; Plants - 1340; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|72785 : 160.0) no description available & (reliability: 968.0) & (original description: Putative TBL25, Description = Protein trichome birefringence-like 25, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf00503_436605-438842' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00503_1064972-1067497' '(gnl|cdd|70178 : 192.0) no description available & (at4g01140 : 115.0) Protein of unknown function (DUF1191); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, leaf whorl, root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1191 (InterPro:IPR010605); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1191) (TAIR:AT4G23720.1); Has 115 Blast hits to 115 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative PGSC0003DMG400000087, Description = Atpob1, putative, PFAM = PF06697)' T '35.2' 'not assigned.unknown' 'niben101scf00503_1086730-1092804' '(at4g01150 : 166.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative CURT1A, Description = Protein CURVATURE THYLAKOID 1A, chloroplastic, PFAM = PF14159)' T '35.2' 'not assigned.unknown' 'niben101scf00503_1094412-1097140' '(at4g05400 : 179.0) copper ion binding; FUNCTIONS IN: copper ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative Sb04g001080, Description = Putative uncharacterized protein Sb04g001080, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00504_623215-627753' '(at2g20815 : 195.0) Family of unknown function (DUF566) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 (InterPro:IPR007573); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) (TAIR:AT2G20616.1). & (gnl|cdd|68069 : 132.0) no description available & (reliability: 390.0) & (original description: Putative TCM_007959, Description = Family of Uncharacterized protein function, putative, PFAM = PF04484)' T '35.2' 'not assigned.unknown' 'niben101scf00505_665913-668917' ' no hits & (original description: Putative LTP1, Description = Lipid transfer protein 1, PFAM = PF14368)' T '35.2' 'not assigned.unknown' 'niben101scf00507_7633-28706' '(at4g14290 : 683.0) alpha/beta-Hydrolases superfamily protein; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23540.1); Has 4662 Blast hits to 3260 proteins in 1050 species: Archae - 26; Bacteria - 2155; Metazoa - 438; Fungi - 142; Plants - 171; Viruses - 20; Other Eukaryotes - 1710 (source: NCBI BLink). & (gnl|cdd|36765 : 179.0) no description available & (reliability: 1366.0) & (original description: Putative dl3185c, Description = Putative uncharacterized protein AT4g14290, PFAM = PF12146)' T '35.2' 'not assigned.unknown' 'niben101scf00507_12068-14998' '(at3g23540 : 164.0) alpha/beta-Hydrolases superfamily protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G14290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative rsc11, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00507_14953-19492' '(at4g14290 : 300.0) alpha/beta-Hydrolases superfamily protein; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23540.1); Has 4662 Blast hits to 3260 proteins in 1050 species: Archae - 26; Bacteria - 2155; Metazoa - 438; Fungi - 142; Plants - 171; Viruses - 20; Other Eukaryotes - 1710 (source: NCBI BLink). & (gnl|cdd|36765 : 80.7) no description available & (reliability: 600.0) & (original description: Putative dl3185c, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00508_147346-150361' ' no hits & (original description: Putative MTR_1g024830, Description = Myb/SANT-like DNA-binding domain protein, PFAM = PF12776)' T '35.2' 'not assigned.unknown' 'niben101scf00508_639231-646863' '(at1g19835 : 688.0) Plant protein of unknown function (DUF869); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G47900.2). & (gnl|cdd|72813 : 256.0) no description available & (reliability: 1376.0) & (original description: Putative FPP4, Description = Filament-like plant protein 4, PFAM = PF05911)' T '35.2' 'not assigned.unknown' 'niben101scf00509_84691-88077' '(at3g56160 : 332.0) Sodium Bile acid symporter family; FUNCTIONS IN: bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657); Has 3096 Blast hits to 3087 proteins in 1049 species: Archae - 42; Bacteria - 2090; Metazoa - 108; Fungi - 101; Plants - 149; Viruses - 0; Other Eukaryotes - 606 (source: NCBI BLink). & (gnl|cdd|40018 : 123.0) no description available & (gnl|cdd|30734 : 89.9) no description available & (reliability: 664.0) & (original description: Putative BASS4, Description = Putative plastid localized membrane protein, PFAM = PF13593)' T '35.2' 'not assigned.unknown' 'niben101scf00509_85416-88013' '(at3g56160 : 332.0) Sodium Bile acid symporter family; FUNCTIONS IN: bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657); Has 3096 Blast hits to 3087 proteins in 1049 species: Archae - 42; Bacteria - 2090; Metazoa - 108; Fungi - 101; Plants - 149; Viruses - 0; Other Eukaryotes - 606 (source: NCBI BLink). & (gnl|cdd|40018 : 121.0) no description available & (gnl|cdd|30734 : 86.8) no description available & (reliability: 664.0) & (original description: Putative Sb09g028950, Description = Putative uncharacterized protein Sb09g028950, PFAM = PF13593)' T '35.2' 'not assigned.unknown' 'niben101scf00520_52850-56322' ' no hits & (original description: Putative Os04g0578900, Description = OSJNBa0011J08.16 protein, PFAM = PF10551;PF03108)' T '35.2' 'not assigned.unknown' 'niben101scf00520_53357-56457' ' no hits & (original description: Putative , Description = Transposon MuDR mudrA-like protein, putative, PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'niben101scf00520_1183468-1186118' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00522_92458-95019' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf00525_14659-27376' '(at3g11760 : 605.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1210.0) & (original description: Putative At5g04860, Description = Multidrug and toxic compound extrusion protein, PFAM = PF10358)' T '35.2' 'not assigned.unknown' 'niben101scf00525_21419-27470' '(at3g11760 : 606.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1212.0) & (original description: Putative At5g04860, Description = Multidrug and toxic compound extrusion protein, PFAM = PF10358)' T '35.2' 'not assigned.unknown' 'niben101scf00525_318597-397273' ' (original description: Putative , Description = Blue copper protein, PFAM = PF02298)' T '35.2' 'not assigned.unknown' 'niben101scf00525_415337-418473' '(at5g22070 : 378.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT3G52060.2); Has 580 Blast hits to 577 proteins in 24 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 0; Plants - 550; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|86287 : 332.0) no description available & (reliability: 756.0) & (original description: Putative Os03g0648100, Description = Expressed protein, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben101scf00526_362062-364487' ' (original description: Putative rt, Description = OSJNBa0089E12.2 protein, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf00527_70261-73223' '(gnl|cdd|70732 : 235.0) no description available & (at2g45360 : 199.0) Protein of unknown function (DUF1442); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1442 (InterPro:IPR009902); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1442) (TAIR:AT3G60780.1); Has 113 Blast hits to 112 proteins in 16 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative , Description = , PFAM = PF07279)' T '35.2' 'not assigned.unknown' 'niben101scf00530_479112-484311' '(at5g53160 : 302.0) Encodes RCAR3, a regulatory component of ABA receptor. Interacts with protein phosphatase 2Cs ABI1 and ABI2. Stimulates ABA signaling.; regulatory components of ABA receptor 3 (RCAR3); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: regulatory component of ABA receptor 1 (TAIR:AT1G01360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 604.0) & (original description: Putative PYL8, Description = Abscisic acid receptor PYL8, PFAM = PF10604)' T '35.2' 'not assigned.unknown' 'niben101scf00530_1166309-1169636' ' no hits & (original description: Putative NtC7, Description = Membrane located receptor-like protein, PFAM = PF13947;PF14380)' T '35.2' 'not assigned.unknown' 'niben101scf00536_537969-549411' '(gnl|cdd|37778 : 169.0) no description available & (at3g07030 : 159.0) Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein (InterPro:IPR002775); BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein (TAIR:AT1G76010.1); Has 449 Blast hits to 441 proteins in 135 species: Archae - 3; Bacteria - 20; Metazoa - 178; Fungi - 24; Plants - 137; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative umc1204, Description = DNA/RNA-binding protein Alba-like protein, PFAM = PF01918)' T '35.2' 'not assigned.unknown' 'niben101scf00536_692125-694541' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00537_48025-50520' '(at4g12970 : 86.7) Encodes a cysteine-rich peptide, a secretory factor that is produced in the mesophyll cells and acts on the epidermis to increase stomatal formation. Its mature form is a 45-aa peptide with three intramolecular disulfide bonds. It is proposed that STOMAGEN increases stomatal number by competing with two negative regulators of stomatal density, EPF1 and EPF2, possibly through direct interaction with the receptor-like protein TMM.; STOMAGEN (STOMAGEN); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: stomatal complex patterning, regulation of stomatal complex development, positive regulation of stomatal complex development, cell-cell signaling; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; Has 29 Blast hits to 29 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative EPFL9, Description = EPIDERMAL PATTERNING FACTOR-like protein 9, PFAM = PF16851)' T '35.2' 'not assigned.unknown' 'niben101scf00537_191661-208657' '(at2g26470 : 343.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF159 (InterPro:IPR003738); Has 3646 Blast hits to 3636 proteins in 1001 species: Archae - 41; Bacteria - 1922; Metazoa - 142; Fungi - 125; Plants - 44; Viruses - 14; Other Eukaryotes - 1358 (source: NCBI BLink). & (gnl|cdd|37829 : 288.0) no description available & (gnl|cdd|86038 : 224.0) no description available & (reliability: 686.0) & (original description: Putative , Description = , PFAM = PF02586)' T '35.2' 'not assigned.unknown' 'niben101scf00537_244262-252246' '(at3g07440 : 236.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48530.1); Has 37 Blast hits to 37 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00537_267227-271246' '(at5g48500 : 95.1) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative At5g48500, Description = Putative uncharacterized protein At5g48500, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00537_285991-289433' '(at5g48500 : 80.1) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative F383_27938, Description = Atp-dependent rna helicase dbp7, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00537_309331-314999' '(at5g48500 : 99.8) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 199.6) & (original description: Putative PGSC0003DMG400020177, Description = Atp-dependent rna helicase dbp7, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00537_330573-334174' ' no hits & (original description: Putative At5g48480, Description = Uncharacterized protein At5g48480, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00538_457420-459983' '(at3g44380 : 237.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to desiccation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Water stress and hypersensitive response domain (InterPro:IPR013990), Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT2G01080.1); Has 168 Blast hits to 167 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 168; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 87.3) no description available & (reliability: 474.0) & (original description: Putative BnaA06g39030D, Description = BnaA06g39030D protein, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'niben101scf00538_616704-619654' ' no hits & (original description: Putative , Description = , PFAM = PF11250)' T '35.2' 'not assigned.unknown' 'niben101scf00539_217828-225118' '(gnl|cdd|47984 : 91.8) no description available & (at5g21160 : 80.9) LA RNA-binding protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Protein of unknown function DM15 (InterPro:IPR006607); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT4G35890.1). & (reliability: 161.8) & (original description: Putative larp1, Description = Winged-helix DNA-binding transcription factor family protein, putative, PFAM = PF05383)' T '35.2' 'not assigned.unknown' 'niben101scf00539_240963-246593' '(at1g75980 : 264.0) Single hybrid motif superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: glycine catabolic process; LOCATED IN: mitochondrion, glycine cleavage complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Single hybrid motif (InterPro:IPR011053), Glycine cleavage H-protein (InterPro:IPR002930); Has 205 Blast hits to 205 proteins in 102 species: Archae - 6; Bacteria - 8; Metazoa - 118; Fungi - 2; Plants - 34; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|38476 : 196.0) no description available & (reliability: 528.0) & (original description: Putative , Description = T4O12.20, PFAM = PF01597)' T '35.2' 'not assigned.unknown' 'niben101scf00539_797689-808178' '(at2g16980 : 396.0) Major facilitator superfamily protein; FUNCTIONS IN: tetracycline transporter activity; INVOLVED IN: response to antibiotic, tetracycline transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Tetracycline resistance protein, TetA (InterPro:IPR001958), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G16970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38027 : 207.0) no description available & (reliability: 792.0) & (original description: Putative MEE15, Description = Tetracycline transporter-like protein 1, PFAM = PF07690)' T '35.2' 'not assigned.unknown' 'niben101scf00541_535020-541783' '(at1g21350 : 256.0) Thioredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|48518 : 180.0) no description available & (reliability: 512.0) & (original description: Putative prx, Description = Alkyl hydroperoxide reductase, PFAM = PF00578)' T '35.2' 'not assigned.unknown' 'niben101scf00542_704452-708578' '(at5g45470 : 104.0) Protein of unknown function (DUF594); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF594 (InterPro:IPR007658); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G45460.1); Has 1360 Blast hits to 854 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1360; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative PGSC0003DMG400013240, Description = , PFAM = PF04578;PF13968)' T '35.2' 'not assigned.unknown' 'niben101scf00542_758167-760589' '(at5g16940 : 214.0) carbon-sulfur lyases; FUNCTIONS IN: carbon-sulfur lyase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutathione-dependent formaldehyde-activating, GFA (InterPro:IPR006913); Has 2298 Blast hits to 2296 proteins in 492 species: Archae - 0; Bacteria - 969; Metazoa - 67; Fungi - 56; Plants - 42; Viruses - 0; Other Eukaryotes - 1164 (source: NCBI BLink). & (gnl|cdd|39394 : 177.0) no description available & (reliability: 428.0) & (original description: Putative ORF1, Description = Putative integron gene cassette protein, PFAM = PF04828)' T '35.2' 'not assigned.unknown' 'niben101scf00543_269696-274298' '(at1g69980 : 155.0) unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30 Blast hits to 30 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative At1g69980, Description = At1g69980, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00543_425775-429619' '(at1g27200 : 558.0) CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G27330.1); Has 321 Blast hits to 319 proteins in 87 species: Archae - 0; Bacteria - 165; Metazoa - 2; Fungi - 4; Plants - 113; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|85620 : 134.0) no description available & (reliability: 1116.0) & (original description: Putative RCOM_0699480, Description = Glycosyltransferase family 92 protein RCOM_0530710, PFAM = PF01697)' T '35.2' 'not assigned.unknown' 'niben101scf00545_3999-9402' '(at1g24310 : 168.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; Has 2922 Blast hits to 2454 proteins in 263 species: Archae - 0; Bacteria - 57; Metazoa - 1043; Fungi - 654; Plants - 388; Viruses - 11; Other Eukaryotes - 769 (source: NCBI BLink). & (gnl|cdd|38301 : 107.0) no description available & (reliability: 336.0) & (original description: Putative NUP54, Description = Nuclear pore complex protein NUP54, PFAM = PF13874)' T '35.2' 'not assigned.unknown' 'niben101scf00546_160279-166296' '(at2g24100 : 376.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30780.1); Has 101 Blast hits to 101 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 752.0) & (original description: Putative F383_27717, Description = ATP-dependent DNA helicase pcrA, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00551_117567-120229' ' no hits & (original description: Putative , Description = , PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf00551_163225-168311' '(at2g35680 : 303.0) Phosphotyrosine protein phosphatases superfamily protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, protein tyrosine/serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: Phosphotyrosine protein phosphatases superfamily protein (TAIR:AT5G56610.1); Has 1976 Blast hits to 1976 proteins in 288 species: Archae - 41; Bacteria - 150; Metazoa - 1097; Fungi - 157; Plants - 204; Viruses - 23; Other Eukaryotes - 304 (source: NCBI BLink). & (gnl|cdd|36931 : 258.0) no description available & (gnl|cdd|47526 : 86.5) no description available & (reliability: 606.0) & (original description: Putative Sb10g003660, Description = Putative uncharacterized protein Sb10g003660, PFAM = PF00782)' T '35.2' 'not assigned.unknown' 'niben101scf00556_75781-77152' ' no hits & (original description: Putative ZPR3, Description = BnaA04g05260D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00556_156304-165816' '(at3g56680 : 163.0) Single-stranded nucleic acid binding R3H protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Single-stranded nucleic acid binding R3H (InterPro:IPR001374); BEST Arabidopsis thaliana protein match is: Single-stranded nucleic acid binding R3H protein (TAIR:AT2G40960.1); Has 389 Blast hits to 389 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 196; Fungi - 53; Plants - 134; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|38164 : 111.0) no description available & (reliability: 326.0) & (original description: Putative BnaA05g28140D, Description = BnaA05g28140D protein, PFAM = PF01424;PF12752)' T '35.2' 'not assigned.unknown' 'niben101scf00557_43971-54342' '(at5g37360 : 272.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 544.0) & (original description: Putative At5g37360, Description = AT5g37360/MNJ8_150, PFAM = PF11282)' T '35.2' 'not assigned.unknown' 'niben101scf00557_147650-150045' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf00559_148267-157426' '(at4g09830 : 160.0) Uncharacterised conserved protein UCP009193; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP009193 (InterPro:IPR016549); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP009193 (TAIR:AT5G64780.1); Has 86 Blast hits to 86 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative , Description = Putative nuclear receptor subfamily 2 group C member 2-like, PFAM = PF15251)' T '35.2' 'not assigned.unknown' 'niben101scf00561_93504-95917' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00563_293146-296021' '(at5g54400 : 403.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G15530.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 806.0) & (original description: Putative At5g54400, Description = At5g54400, PFAM = PF08241)' T '35.2' 'not assigned.unknown' 'niben101scf00563_476958-479161' '(at1g52855 : 88.6) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15534.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00564_81758-84381' ' no hits & (original description: Putative , Description = , PFAM = PF17181)' T '35.2' 'not assigned.unknown' 'niben101scf00567_445879-456095' '(at5g45410 : 318.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25030.2); Has 124 Blast hits to 124 proteins in 34 species: Archae - 2; Bacteria - 31; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative At5g45410, Description = AT5G45410 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00568_426259-428786' ' no hits & (original description: Putative Os07g0686300, Description = Putative E3 ubiquitin-protein ligase Arkadia-like, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf00568_587261-589218' ' no hits & (original description: Putative , Description = , PFAM = PF00646)' T '35.2' 'not assigned.unknown' 'niben101scf00570_204104-210477' '(at1g26110 : 228.0) Encodes Decapping 5, required for mRNA decapping, P-body formation and translational repression during postembryonic development.; decapping 5 (DCP5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: negative regulation of translation, deadenylation-independent decapping of nuclear-transcribed mRNA, cytoplasmic mRNA processing body assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DFDF motif (InterPro:IPR019050), FFD/TFG box motif (InterPro:IPR019053); BEST Arabidopsis thaliana protein match is: decapping 5-like (TAIR:AT5G45330.1); Has 14874 Blast hits to 10327 proteins in 603 species: Archae - 12; Bacteria - 902; Metazoa - 6418; Fungi - 2978; Plants - 1226; Viruses - 261; Other Eukaryotes - 3077 (source: NCBI BLink). & (gnl|cdd|36290 : 148.0) no description available & (gnl|cdd|29723 : 134.0) no description available & (reliability: 456.0) & (original description: Putative sum2, Description = Protein LSM14 B, PFAM = PF12701)' T '35.2' 'not assigned.unknown' 'niben101scf00570_239065-243010' '(at3g21360 : 227.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Taurine catabolism dioxygenase TauD/TfdA (InterPro:IPR003819); Has 1029 Blast hits to 1021 proteins in 229 species: Archae - 0; Bacteria - 729; Metazoa - 46; Fungi - 17; Plants - 110; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative At3g21360, Description = Clavaminate synthase-like protein At3g21360, PFAM = PF02668)' T '35.2' 'not assigned.unknown' 'niben101scf00570_323371-329188' '(at1g26090 : 470.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1161 Blast hits to 1150 proteins in 416 species: Archae - 94; Bacteria - 665; Metazoa - 113; Fungi - 156; Plants - 46; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|30352 : 84.6) no description available & (reliability: 940.0) & (original description: Putative At1g26090, Description = Uncharacterized protein At1g26090, chloroplastic, PFAM = PF02374)' T '35.2' 'not assigned.unknown' 'niben101scf00570_427911-430336' ' no hits & (original description: Putative PGSC0003DMG400007474, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00571_14919-25710' '(gnl|cdd|69161 : 311.0) no description available & (at1g03610 : 277.0) Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT4G03420.1); Has 266 Blast hits to 262 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 263; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 554.0) & (original description: Putative F9H3.4, Description = Putative uncharacterized protein AT4g03420, PFAM = PF05623)' T '35.2' 'not assigned.unknown' 'niben101scf00571_400167-403644' '(at1g55230 : 337.0) Family of unknown function (DUF716) ; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF716) (TAIR:AT1G55240.1); Has 423 Blast hits to 422 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 178; Fungi - 0; Plants - 243; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68394 : 132.0) no description available & (reliability: 674.0) & (original description: Putative T1.1, Description = T1.1 protein, PFAM = PF04819)' T '35.2' 'not assigned.unknown' 'niben101scf00571_453240-460418' '(at5g19860 : 169.0) Protein of unknown function, DUF538; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT1G55265.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86647 : 102.0) no description available & (reliability: 338.0) & (original description: Putative BnaA10g15350D, Description = BnaA10g15350D protein, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben101scf00571_1023531-1034537' '(at5g25770 : 476.0) alpha/beta-Hydrolases superfamily protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl xylan esterase (InterPro:IPR008391); Has 1607 Blast hits to 1605 proteins in 565 species: Archae - 54; Bacteria - 1389; Metazoa - 0; Fungi - 31; Plants - 36; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 952.0) & (original description: Putative At5g25770, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF00326)' T '35.2' 'not assigned.unknown' 'niben101scf00572_73277-87016' '(at1g64050 : 167.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 334.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00573_576149-581217' '(at1g07220 : 613.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF821) (TAIR:AT5G23850.1); Has 670 Blast hits to 661 proteins in 130 species: Archae - 0; Bacteria - 41; Metazoa - 224; Fungi - 131; Plants - 246; Viruses - 2; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|69222 : 492.0) no description available & (gnl|cdd|37669 : 453.0) no description available & (reliability: 1226.0) & (original description: Putative duf821, Description = DUF821, PFAM = PF05686)' T '35.2' 'not assigned.unknown' 'niben101scf00574_1000536-1002992' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00576_133415-135785' ' no hits & (original description: Putative At2g06320, Description = Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00576_189751-198844' '(at5g25250 : 489.0) SPFH/Band 7/PHB domain-containing membrane-associated protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT5G25260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37879 : 351.0) no description available & (gnl|cdd|48211 : 96.0) no description available & (reliability: 978.0) & (original description: Putative FLOT1, Description = Flotillin-like protein 1, PFAM = PF01145)' T '35.2' 'not assigned.unknown' 'niben101scf00576_244502-291058' ' no hits & (original description: Putative At1g80610, Description = At1g80610/T21F11_6, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00576_270212-273660' ' no hits & (original description: Putative PGSC0003DMG400014129, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00576_270427-273349' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00576_319365-322087' ' no hits & (original description: Putative TCM_027385, Description = Beta-3 adrenergic receptor, putative, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf00576_329835-334957' ' no hits & (original description: Putative dcl4, Description = Dicer-like protein 4, PFAM = PF14709)' T '35.2' 'not assigned.unknown' 'niben101scf00577_192545-199924' '(at3g18440 : 461.0) Belongs to the aluminum-activated malate transporter family. Encodes a vacuolar malate channel. Expressed in all parts of plants. Almost exclusively expressed in mesophyll cells of leaves.; aluminum-activated malate transporter 9 (ALMT9); CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G18420.1); Has 814 Blast hits to 808 proteins in 259 species: Archae - 0; Bacteria - 440; Metazoa - 0; Fungi - 20; Plants - 338; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|39909 : 395.0) no description available & (gnl|cdd|85194 : 150.0) no description available & (reliability: 922.0) & (original description: Putative ALMT9, Description = Aluminum-activated malate transporter 9, PFAM = PF11744)' T '35.2' 'not assigned.unknown' 'niben101scf00577_722895-725428' '(at1g13360 : 87.4) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). & (reliability: 174.8) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00577_958227-960832' ' no hits & (original description: Putative Tcs1, Description = Retrotransposon protein, putative, Ty1-copia subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00578_502896-506760' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'niben101scf00581_60299-63003' ' no hits & (original description: Putative , Description = , PFAM = PF07939)' T '35.2' 'not assigned.unknown' 'niben101scf00581_70674-73348' ' no hits & (original description: Putative At2g42760, Description = At2g42760, PFAM = PF07939)' T '35.2' 'not assigned.unknown' 'niben101scf00581_248138-250594' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00582_135598-139508' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00582_211678-216894' '(at3g53630 : 191.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18692.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative PGSC0003DMG400008931, Description = BnaC04g27080D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00585_181015-189103' '(at4g16444 : 117.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CHD5-like protein (InterPro:IPR007514); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative At4g16444, Description = CHD5-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00585_369276-372802' ' no hits & (original description: Putative , Description = , PFAM = PF00098)' T '35.2' 'not assigned.unknown' 'niben101scf00585_537000-539806' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf00585_537393-539848' ' (original description: Putative Tgt1ORF2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf00586_4556-7291' '(at3g53850 : 129.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT5G02060.1); Has 207 Blast hits to 207 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative GLYMA_03G0671001, Description = CASP-like protein, PFAM = PF04535)' T '35.2' 'not assigned.unknown' 'niben101scf00586_295484-298035' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'niben101scf00589_233001-235437' ' no hits & (original description: Putative glysoja_038429, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf00592_354069-357153' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00592_419011-424193' '(at1g63855 : 256.0) Putative methyltransferase family protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G27400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 512.0) & (original description: Putative At1g63855, Description = Putative methyltransferase family protein, PFAM = PF10294)' T '35.2' 'not assigned.unknown' 'niben101scf00592_1481473-1484231' ' no hits & (original description: Putative , Description = , PFAM = PF13912)' T '35.2' 'not assigned.unknown' 'niben101scf00593_441627-448262' '(at1g18850 : 326.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 40 Blast hits to 40 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 652.0) & (original description: Putative F6A14.6, Description = F6A14.6 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00596_237807-252136' '(at2g26840 : 230.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43910.1). & (reliability: 460.0) & (original description: Putative At2g26840, Description = BnaA03g22600D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00597_524146-530147' '(at4g28760 : 522.0) Protein of unknown function (DUF3741); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3741) (TAIR:AT2G20240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1044.0) & (original description: Putative , Description = , PFAM = PF12552;PF14309)' T '35.2' 'not assigned.unknown' 'niben101scf00600_55831-64278' '(at5g40740 : 787.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1574.0) & (original description: Putative 38930, Description = AUGMIN subunit 6, PFAM = PF14661)' T '35.2' 'not assigned.unknown' 'niben101scf00600_212295-217930' '(at5g14310 : 661.0) carboxyesterase 16 (CXE16); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36728 : 252.0) no description available & (gnl|cdd|87389 : 182.0) no description available & (q6l545|gid1_orysa : 126.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 1322.0) & (original description: Putative CXE16, Description = Probable carboxylesterase 16, PFAM = PF07859)' T '35.2' 'not assigned.unknown' 'niben101scf00602_71197-76541' ' no hits & (original description: Putative Sb01g035690, Description = Putative uncharacterized protein Sb01g035690, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00603_2417-5133' ' no hits & (original description: Putative PGSC0003DMG400014888, Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00603_67496-112681' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00603_315255-318328' '(at4g27745 : 160.0) Yippee family putative zinc-binding protein; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: Yippee family putative zinc-binding protein (TAIR:AT5G53940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38609 : 126.0) no description available & (gnl|cdd|66871 : 123.0) no description available & (p59234|yipl_soltu : 102.0) Protein yippee-like - Solanum tuberosum (Potato) & (reliability: 320.0) & (original description: Putative ypel, Description = Protein yippee-like, PFAM = PF03226)' T '35.2' 'not assigned.unknown' 'niben101scf00606_156076-158444' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00607_399308-401709' ' no hits & (original description: Putative , Description = , PFAM = PF13966)' T '35.2' 'not assigned.unknown' 'niben101scf00607_415326-418717' '(at4g18230 : 207.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharide biosynthesis protein Alg14 like (InterPro:IPR013969); Has 640 Blast hits to 640 proteins in 277 species: Archae - 4; Bacteria - 281; Metazoa - 94; Fungi - 127; Plants - 57; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|38549 : 158.0) no description available & (gnl|cdd|87589 : 135.0) no description available & (reliability: 414.0) & (original description: Putative ugt1, Description = UDP-N-acetylglucosamine transferase subunit ALG14, PFAM = PF08660)' T '35.2' 'not assigned.unknown' 'niben101scf00611_147822-159348' '(at5g20540 : 371.0) Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity.; BREVIS RADIX-like 4 (BRXL4); CONTAINS InterPro DOMAIN/s: Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591); BEST Arabidopsis thaliana protein match is: DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein (TAIR:AT3G14000.2); Has 719 Blast hits to 410 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 715; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 742.0) & (original description: Putative BRXL4, Description = Protein Brevis radix-like 4, PFAM = PF08381;PF08381;PF13713)' T '35.2' 'not assigned.unknown' 'niben101scf00611_225066-228301' '(at3g13980 : 116.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54200.1); Has 1485 Blast hits to 418 proteins in 98 species: Archae - 0; Bacteria - 6; Metazoa - 246; Fungi - 61; Plants - 107; Viruses - 6; Other Eukaryotes - 1059 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00611_524789-528906' '(at4g26060 : 153.0) Ribosomal protein L18ae family; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57060.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative At5g57060, Description = Putative uncharacterized protein At5g57060, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00611_1170214-1174841' ' no hits & (original description: Putative BnaAnng21200D, Description = Probable magnesium transporter, PFAM = PF12023)' T '35.2' 'not assigned.unknown' 'niben101scf00612_176405-178842' ' (original description: Putative PGSC0003DMG400008637, Description = Putative ovule protein, PFAM = PF05938)' T '35.2' 'not assigned.unknown' 'niben101scf00612_274312-277864' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00616_247025-249369' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00618_151810-161170' ' (original description: Putative csd, Description = Putative cysteine desulfurase, PFAM = PF00266)' T '35.2' 'not assigned.unknown' 'niben101scf00621_136900-143456' '(at4g15545 : 236.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative At4g15545, Description = Uncharacterized protein At4g15545, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00621_219226-221753' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00621_382670-385209' '(at3g21550 : 235.0) DUF679 domain membrane protein 2 (DMP2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF679 (InterPro:IPR007770); BEST Arabidopsis thaliana protein match is: DUF679 domain membrane protein 1 (TAIR:AT3G21520.1); Has 265 Blast hits to 257 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 265; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68643 : 218.0) no description available & (reliability: 470.0) & (original description: Putative DMP2, Description = AT3g21550/MIL23_11, PFAM = PF05078)' T '35.2' 'not assigned.unknown' 'niben101scf00624_14801-16968' ' no hits & (original description: Putative LCR74, Description = Defensin-like protein, PFAM = PF00304)' T '35.2' 'not assigned.unknown' 'niben101scf00625_97167-102399' ' no hits & (original description: Putative RBE, Description = Palmate-like pentafoliata 1 transcription factor, PFAM = PF13912)' T '35.2' 'not assigned.unknown' 'niben101scf00625_264414-267157' '(at3g11890 : 87.8) Sterile alpha motif (SAM) domain-containing protein; CONTAINS InterPro DOMAIN/s: Sterile alpha motif (InterPro:IPR001660), Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 2 (InterPro:IPR011510); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative , Description = , PFAM = PF07647)' T '35.2' 'not assigned.unknown' 'niben101scf00629_168080-170470' '(atmg00860 : 108.0) hypothetical protein; DNA/RNA polymerases superfamily protein. & (reliability: 216.0) & (original description: Putative At2g04670, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf00635_8809-15114' '(at1g69360 : 308.0) Plant protein of unknown function (DUF863); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF863, plant (InterPro:IPR008581); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G26620.1); Has 257 Blast hits to 226 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2; Plants - 245; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|69429 : 237.0) no description available & (reliability: 616.0) & (original description: Putative , Description = , PFAM = PF05904)' T '35.2' 'not assigned.unknown' 'niben101scf00635_10333-15750' '(at1g69360 : 309.0) Plant protein of unknown function (DUF863); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF863, plant (InterPro:IPR008581); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G26620.1); Has 257 Blast hits to 226 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2; Plants - 245; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|69429 : 244.0) no description available & (reliability: 618.0) & (original description: Putative BnaC08g40020D, Description = BnaC08g40020D protein, PFAM = PF05904;PF05904)' T '35.2' 'not assigned.unknown' 'niben101scf00635_116791-120476' ' no hits & (original description: Putative NRP1, Description = Nodulin-related protein 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00635_823939-843599' '(at4g18230 : 287.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharide biosynthesis protein Alg14 like (InterPro:IPR013969); Has 640 Blast hits to 640 proteins in 277 species: Archae - 4; Bacteria - 281; Metazoa - 94; Fungi - 127; Plants - 57; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|38549 : 215.0) no description available & (gnl|cdd|87589 : 209.0) no description available & (reliability: 574.0) & (original description: Putative ALG14, Description = Beta(1,4)-N-acetylglucosaminyltransferase, PFAM = PF08660)' T '35.2' 'not assigned.unknown' 'niben101scf00635_846333-849546' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf00635_850969-856844' '(at1g26470 : 114.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, H4/H2A histone acetyltransferase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CT20 (InterPro:IPR012423); Has 60 Blast hits to 60 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 2; Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative PGSC0003DMG400028321, Description = Chromatin modification-related protein Eaf7, PFAM = PF07904)' T '35.2' 'not assigned.unknown' 'niben101scf00638_61626-64617' ' no hits & (original description: Putative PGSC0003DMG401021955, Description = , PFAM = PF17181)' T '35.2' 'not assigned.unknown' 'niben101scf00638_72440-76234' '(at5g20190 : 146.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G80130.1); Has 458 Blast hits to 304 proteins in 39 species: Archae - 0; Bacteria - 85; Metazoa - 7; Fungi - 10; Plants - 317; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative At1g80130, Description = Tetratricopeptide repeat-like superfamily protein, putative isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00638_259505-263657' '(at2g01640 : 81.6) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 163.2) & (original description: Putative , Description = Putative reverse transcriptase, PFAM = PF15341)' T '35.2' 'not assigned.unknown' 'niben101scf00640_8867-12618' '(at3g14920 : 636.0) Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A (InterPro:IPR021102); BEST Arabidopsis thaliana protein match is: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein (TAIR:AT5G05480.1); Has 261 Blast hits to 247 proteins in 94 species: Archae - 30; Bacteria - 27; Metazoa - 0; Fungi - 111; Plants - 90; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 1272.0) & (original description: Putative At3g14920, Description = Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A, PFAM = PF12222)' T '35.2' 'not assigned.unknown' 'niben101scf00640_42575-58361' '(at1g78810 : 106.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative glysoja_038102, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00640_144060-147787' '(at4g28260 : 356.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 50 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 712.0) & (original description: Putative Os10g0500600, Description = Os10g0500600 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00644_52538-103468' '(at1g73650 : 410.0) FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors; INVOLVED IN: lipid metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104), Protein of unknown function DUF1295 (InterPro:IPR010721); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1295) (TAIR:AT1G18180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|70433 : 258.0) no description available & (gnl|cdd|39849 : 235.0) no description available & (reliability: 820.0) & (original description: Putative 14354, Description = Predicted protein, PFAM = PF06966)' T '35.2' 'not assigned.unknown' 'niben101scf00646_66099-92414' '(at4g22970 : 1300.0) Encodes a separase (ESP), homologous to human and mouse separase protein. Separase is a capase family protease required for the release of sister chromatid cohesion during meiosis and mitosis. Arabidopsis separase contains a predicted 2Fe2S-ferredoxin domain that is not present in the proteins of other organisms. Also contains a putative EF-hand calcium binding domain. Mutant seeds exhibited embryo arrest at the globular stage. The endosperm also exhibited a weak titan-like phenotype. Transgenic plants expressing AESP RNA interference (RNAi) from the meiosis-specific DMC1 promoter exhibited alterations in chromosome segregation during meiosis I and II that resulted in polyads containing from one to eight microspores. Plays an essential role in embryo development. Required for the removal of cohesin from meiotic chromosomes and establishment of meiotic nuclear domains. This gene was also identified through the rsw4 mutant. Lines carrying recessive, temperature-sensitive mutations exhibit reduced anisotropic growth at 30 degrees Celsius. Microtubules and cellulose microfibrils are not depleted or disoriented in the mutants at the restrictive temperature.; homolog of separase (ESP); FUNCTIONS IN: peptidase activity; INVOLVED IN: meiotic chromosome separation, chromosome separation, embryo development ending in seed dormancy, positive regulation of sister chromatid cohesion, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C50, separase (InterPro:IPR005314); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28550.1). & (gnl|cdd|86370 : 255.0) no description available & (gnl|cdd|37060 : 128.0) no description available & (reliability: 2600.0) & (original description: Putative Sb04g034460, Description = Putative ovule protein, PFAM = PF03568)' T '35.2' 'not assigned.unknown' 'niben101scf00646_382413-388137' '(at2g01080 : 202.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT2G27080.2); Has 675 Blast hits to 674 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 673; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 89.9) no description available & (reliability: 404.0) & (original description: Putative At2g01080, Description = Expressed protein, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'niben101scf00646_539318-541686' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00646_634673-640931' ' no hits & (original description: Putative GBF4, Description = G-box-binding factor 4, PFAM = PF00170)' T '35.2' 'not assigned.unknown' 'niben101scf00646_732752-738540' ' no hits & (original description: Putative PGSC0003DMG400029754, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00646_833492-837276' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00646_865880-1014902' ' no hits & (original description: Putative PGSC0003DMG400007253, Description = Non-specific serine/threonine protein kinase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00647_91152-93601' '(at4g31360 : 118.0) selenium binding; FUNCTIONS IN: selenium binding; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Selenoprotein, Rdx type (InterPro:IPR011893); BEST Arabidopsis thaliana protein match is: selenium binding (TAIR:AT2G24440.1); Has 221 Blast hits to 197 proteins in 65 species: Archae - 0; Bacteria - 10; Metazoa - 93; Fungi - 17; Plants - 58; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative At2g24440, Description = BnaA08g12540D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00647_282971-285840' ' no hits & (original description: Putative At1g63300, Description = Putative uncharacterized protein F9N12.8, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00653_232325-242112' '(at2g43180 : 544.0) Phosphoenolpyruvate carboxylase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Isocitrate lyase/phosphorylmutase (InterPro:IPR000918); BEST Arabidopsis thaliana protein match is: Phosphoenolpyruvate carboxylase family protein (TAIR:AT1G77060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|32583 : 255.0) no description available & (gnl|cdd|36474 : 247.0) no description available & (q05957|cppm_diaca : 169.0) Putative carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) (Carboxyphosphonoenolpyruvate phosphonomutase) (CPEP phosphonomutase) (PSR132) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1088.0) & (original description: Putative bcpA, Description = Carboxyvinyl-carboxyphosphonate phosphorylmutase, PFAM = PF13714)' T '35.2' 'not assigned.unknown' 'niben101scf00654_346407-350736' ' no hits & (original description: Putative PGSC0003DMG400022257, Description = Glycine-rich protein / oleosin, putative, PFAM = PF01277)' T '35.2' 'not assigned.unknown' 'niben101scf00654_448765-451462' ' no hits & (original description: Putative , Description = DNA/RNA polymerases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00661_107431-110557' '(at1g10522 : 192.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative At1g10522, Description = At1g10522, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00661_112907-118232' '(at1g24095 : 197.0) Putative thiol-disulphide oxidoreductase DCC; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Putative thiol-disulphide oxidoreductase DCC (InterPro:IPR007263); BEST Arabidopsis thaliana protein match is: Putative thiol-disulphide oxidoreductase DCC (TAIR:AT1G52590.1). & (gnl|cdd|32828 : 89.6) no description available & (reliability: 394.0) & (original description: Putative BnaC05g50790D, Description = RNase H domain-containing protein, PFAM = PF04134)' T '35.2' 'not assigned.unknown' 'niben101scf00662_88270-95208' '(at1g27700 : 229.0) Syntaxin/t-SNARE family protein; INVOLVED IN: Golgi vesicle transport, vesicle-mediated transport; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: t-SNARE (InterPro:IPR010989), Syntaxin 6, N-terminal (InterPro:IPR015260); BEST Arabidopsis thaliana protein match is: Syntaxin/t-SNARE family protein (TAIR:AT4G30240.1); Has 134 Blast hits to 133 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87826 : 102.0) no description available & (reliability: 458.0) & (original description: Putative At1g27700, Description = At1g27700/T22C5_14, PFAM = PF09177)' T '35.2' 'not assigned.unknown' 'niben101scf00662_159771-162097' '(at1g75810 : 118.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 13 Blast hits to 13 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative At1g75810, Description = At1g75810, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00663_628577-631121' ' no hits & (original description: Putative , Description = , PFAM = PF00646)' T '35.2' 'not assigned.unknown' 'niben101scf00665_13651-17375' ' no hits & (original description: Putative PGSC0003DMG400001708, Description = Ring-H2 zinc finger protein-like, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf00665_120873-124100' '(at3g17350 : 314.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50290.1); Has 203 Blast hits to 203 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 203; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 628.0) & (original description: Putative BnaC05g36070D, Description = BnaC05g36070D protein, PFAM = PF14380;PF13947)' T '35.2' 'not assigned.unknown' 'niben101scf00669_101727-107400' '(at3g56830 : 148.0) Similar in sequence to NPQ6 and NPQ7, but loss of function mutant does not exhibit a nonphotochemical quenching phenotype.; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF565 (InterPro:IPR007572); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF565) (TAIR:AT1G65420.1); Has 154 Blast hits to 154 proteins in 43 species: Archae - 0; Bacteria - 27; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative MTR_4g025390, Description = Ycf20-like protein, PFAM = PF04483)' T '35.2' 'not assigned.unknown' 'niben101scf00679_695531-698565' '(at3g21710 : 89.4) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00679_839332-844327' '(at3g21700 : 298.0) Monomeric G protein. Expressed in root epidermal cells that are destined to become atrichoblasts. Also expressed during pollen development and in the pollen tube tip.; SGP2; FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Mitochondrial Rho-like (InterPro:IPR013684), GTPase, Tem1 (InterPro:IPR017231); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT5G54840.1); Has 12242 Blast hits to 12235 proteins in 404 species: Archae - 2; Bacteria - 22; Metazoa - 5958; Fungi - 1374; Plants - 1920; Viruses - 3; Other Eukaryotes - 2963 (source: NCBI BLink). & (gnl|cdd|36886 : 281.0) no description available & (gnl|cdd|58011 : 262.0) no description available & (reliability: 596.0) & (original description: Putative sgp1, Description = Monomeric G protein SGP1, PFAM = PF00071)' T '35.2' 'not assigned.unknown' 'niben101scf00680_95169-100774' '(at2g12646 : 186.0) PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT3G60670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative , Description = PLATZ transcription factor family protein, PFAM = PF04640;PF04640)' T '35.2' 'not assigned.unknown' 'niben101scf00680_104376-106711' ' no hits & (original description: Putative , Description = , PFAM = PF17123)' T '35.2' 'not assigned.unknown' 'niben101scf00680_169383-177889' '(at4g30850 : 352.0) heptahelical transmembrane protein homologous to human adiponectin receptors and progestin receptors; heptahelical transmembrane protein2 (HHP2); FUNCTIONS IN: receptor activity; INVOLVED IN: response to hormone stimulus, response to sucrose stimulus; LOCATED IN: integral to membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Hly-III related (InterPro:IPR004254); BEST Arabidopsis thaliana protein match is: heptahelical protein 3 (TAIR:AT2G24150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35967 : 243.0) no description available & (gnl|cdd|86213 : 141.0) no description available & (reliability: 704.0) & (original description: Putative HHP2, Description = Heptahelical transmembrane protein 2, PFAM = PF03006)' T '35.2' 'not assigned.unknown' 'niben101scf00681_180868-183404' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf00682_104304-170395' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf00682_289257-294982' '(at5g03795 : 568.0) Exostosin family protein; LOCATED IN: membrane; EXPRESSED IN: embryo, sepal, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT3G07620.1); Has 1413 Blast hits to 1401 proteins in 109 species: Archae - 0; Bacteria - 9; Metazoa - 310; Fungi - 4; Plants - 989; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (gnl|cdd|36239 : 302.0) no description available & (gnl|cdd|66673 : 196.0) no description available & (reliability: 1136.0) & (original description: Putative At3g07620, Description = Probable glycosyltransferase At3g07620, PFAM = PF03016)' T '35.2' 'not assigned.unknown' 'niben101scf00682_468698-480134' '(at2g36650 : 126.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00682_498527-505391' '(at1g80190 : 208.0) Similar to the PSF1 component of GINS complex, which in other organism was shown to be involved in the initiation of DNA replication.; partner of SLD five 1 (PSF1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: DNA-dependent DNA replication initiation; LOCATED IN: GINS complex, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GINS complex, subunit Psf1 (InterPro:IPR005339); Has 334 Blast hits to 334 proteins in 169 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 142; Plants - 43; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|38513 : 172.0) no description available & (gnl|cdd|67279 : 112.0) no description available & (reliability: 416.0) & (original description: Putative pco124429, Description = DNA replication complex GINS protein PSF1, PFAM = PF05916)' T '35.2' 'not assigned.unknown' 'niben101scf00686_172187-175341' '(at5g11000 : 241.0) Plant protein of unknown function (DUF868); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT2G25200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|69434 : 193.0) no description available & (reliability: 482.0) & (original description: Putative T30N20_270, Description = AT5g11000/T30N20_270, PFAM = PF05910)' T '35.2' 'not assigned.unknown' 'niben101scf00687_223140-238833' '(at2g47115 : 226.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative BnaC03g72460D, Description = BnaC03g72460D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00687_406272-422376' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00687_687461-717248' '(at3g62360 : 1411.0) Carbohydrate-binding-like fold; FUNCTIONS IN: carbohydrate binding; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate-binding-like fold (InterPro:IPR013784); Has 321 Blast hits to 256 proteins in 98 species: Archae - 6; Bacteria - 117; Metazoa - 138; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|37159 : 1042.0) no description available & (reliability: 2822.0) & (original description: Putative BnaC08g32180D, Description = BnaC08g32180D protein, PFAM = PF13620;PF13620)' T '35.2' 'not assigned.unknown' 'niben101scf00687_858257-861144' '(at2g47360 : 143.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02570.1); Has 58 Blast hits to 55 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative PGSC0003DMG400007284, Description = BnaA03g21750D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00689_21649-24080' ' no hits & (original description: Putative , Description = DNA/RNA polymerases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00690_145187-153756' ' (original description: Putative MurD, Description = Predicted protein, PFAM = PF08245;PF02826)' T '35.2' 'not assigned.unknown' 'niben101scf00690_333584-335913' '(at3g57785 : 137.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42310.1); Has 121 Blast hits to 121 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 48; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative At3g57785, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00691_48257-50057' '(at2g30000 : 193.0) PHF5-like protein; CONTAINS InterPro DOMAIN/s: PHF5-like (InterPro:IPR005345); BEST Arabidopsis thaliana protein match is: PHF5-like protein (TAIR:AT1G07170.3); Has 420 Blast hits to 420 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 129; Fungi - 128; Plants - 86; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|36917 : 175.0) no description available & (gnl|cdd|67286 : 165.0) no description available & (reliability: 386.0) & (original description: Putative ini1, Description = PHD finger-like domain-containing protein 5A, PFAM = PF03660)' T '35.2' 'not assigned.unknown' 'niben101scf00691_151910-155088' ' no hits & (original description: Putative PGSC0003DMG400003196, Description = Putative two-component response regulator ARR12-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00691_247319-253163' '(at4g30993 : 174.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative TCM_037088, Description = Calcineurin-like metallo-phosphoesterase superfamily protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00691_364045-368332' '(at5g58005 : 139.0) Cytochrome c oxidase, subunit Vib family protein; FUNCTIONS IN: cytochrome-c oxidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIb (InterPro:IPR003213); Has 136 Blast hits to 136 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 50; Fungi - 38; Plants - 46; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative At5g58005, Description = AT5G58005 protein, PFAM = PF02297)' T '35.2' 'not assigned.unknown' 'niben101scf00693_39710-45811' '(at3g29170 : 120.0) Eukaryotic protein of unknown function (DUF872); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0414, transmembrane (InterPro:IPR008590); BEST Arabidopsis thaliana protein match is: Eukaryotic protein of unknown function (DUF872) (TAIR:AT2G19350.1); Has 245 Blast hits to 245 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 137; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|39950 : 105.0) no description available & (gnl|cdd|69438 : 103.0) no description available & (reliability: 240.0) & (original description: Putative BnaA02g29730D, Description = BnaA02g29730D protein, PFAM = PF05915)' T '35.2' 'not assigned.unknown' 'niben101scf00693_133428-137960' '(at5g55960 : 827.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0118 (InterPro:IPR002549); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37576 : 501.0) no description available & (reliability: 1654.0) & (original description: Putative BnaA10g10060D, Description = BnaA10g10060D protein, PFAM = PF01594)' T '35.2' 'not assigned.unknown' 'niben101scf00693_215708-240080' '(at3g17300 : 149.0) unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35 Blast hits to 35 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative , Description = , PFAM = PF05347)' T '35.2' 'not assigned.unknown' 'niben101scf00700_134663-137185' '(at4g20190 : 95.5) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44660.1); Has 271 Blast hits to 209 proteins in 52 species: Archae - 0; Bacteria - 15; Metazoa - 63; Fungi - 14; Plants - 48; Viruses - 3; Other Eukaryotes - 128 (source: NCBI BLink). & (reliability: 191.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00700_136750-146498' '(at5g44650 : 183.0) Encodes a chloroplast protein that induces tolerance to multiple environmental stresses and reduces photooxidative damage.; CHLOROPLAST PROTEIN-ENHANCING STRESS TOLERANCE (CEST); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, chloroplast organization, hyperosmotic salinity response, response to photooxidative stress, heat acclimation; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative CEST, Description = OsCEST, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00700_136782-146477' '(at5g44650 : 225.0) Encodes a chloroplast protein that induces tolerance to multiple environmental stresses and reduces photooxidative damage.; CHLOROPLAST PROTEIN-ENHANCING STRESS TOLERANCE (CEST); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, chloroplast organization, hyperosmotic salinity response, response to photooxidative stress, heat acclimation; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 450.0) & (original description: Putative CEST, Description = OsCEST, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00700_137186-146402' '(at5g44650 : 225.0) Encodes a chloroplast protein that induces tolerance to multiple environmental stresses and reduces photooxidative damage.; CHLOROPLAST PROTEIN-ENHANCING STRESS TOLERANCE (CEST); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, chloroplast organization, hyperosmotic salinity response, response to photooxidative stress, heat acclimation; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 450.0) & (original description: Putative CEST, Description = OsCEST, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00704_326947-332329' ' no hits & (original description: Putative C3H24, Description = Zinc finger CCCH domain-containing protein 55, PFAM = PF14608;PF14608;PF14608)' T '35.2' 'not assigned.unknown' 'niben101scf00705_391738-401982' '(at2g32640 : 774.0) Lycopene beta/epsilon cyclase protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; INVOLVED IN: carotenoid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lycopene beta/epsilon cyclase (InterPro:IPR008671); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1548.0) & (original description: Putative cruP, Description = Lycopene cyclase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00709_231210-234295' '(at4g33890 : 256.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 512.0) & (original description: Putative At2g14850, Description = Putative uncharacterized protein At2g14850, PFAM = PF12767)' T '35.2' 'not assigned.unknown' 'niben101scf00709_407437-410541' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00709_859319-864164' '(at5g67370 : 398.0) Protein of unknown function (DUF1230); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1230 (InterPro:IPR009631); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1230) (TAIR:AT5G11840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70275 : 207.0) no description available & (reliability: 796.0) & (original description: Putative ycf36, Description = Hypothetical plastid protein 36, PFAM = PF06799)' T '35.2' 'not assigned.unknown' 'niben101scf00710_9688-14603' ' no hits & (original description: Putative , Description = ATP synthase subunit epsilon, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00710_9865-15215' ' no hits & (original description: Putative , Description = ATP synthase subunit epsilon, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00710_96544-98987' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00711_353126-365122' '(q8s1z1|utp11_orysa : 218.0) Probable U3 small nucleolar RNA-associated protein 11 (U3 snoRNA-associated protein 11) - Oryza sativa (Rice) & (at3g60360 : 210.0) EMBRYO SAC DEVELOPMENT ARREST 14 (EDA14); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: megagametogenesis; LOCATED IN: small-subunit processome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp11 (InterPro:IPR007144); Has 434 Blast hits to 428 proteins in 209 species: Archae - 4; Bacteria - 1; Metazoa - 127; Fungi - 141; Plants - 59; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|67607 : 133.0) no description available & (gnl|cdd|38447 : 132.0) no description available & (reliability: 420.0) & (original description: Putative Os01g0810000, Description = Probable U3 small nucleolar RNA-associated protein 11, PFAM = PF03998)' T '35.2' 'not assigned.unknown' 'niben101scf00712_33883-36899' ' no hits & (original description: Putative Sb07g027530, Description = Putative uncharacterized protein Sb07g027530, PFAM = PF00403)' T '35.2' 'not assigned.unknown' 'niben101scf00712_100575-103818' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00712_111685-114882' '(at1g76440 : 138.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G20870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative Ntshsp, Description = Small heat shock protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00712_592772-603223' '(at1g76405 : 206.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20816.1); Has 52 Blast hits to 52 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative OEP21B, Description = Outer envelope pore protein 21B, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00712_864293-872401' '(at1g42480 : 180.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3456 (InterPro:IPR021852); Has 152 Blast hits to 152 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative BnaA08g04550D, Description = BnaA08g04550D protein, PFAM = PF11938)' T '35.2' 'not assigned.unknown' 'niben101scf00712_939109-944506' '(at1g42960 : 132.0) expressed protein localized to the inner membrane of the chloroplast.; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16660.1); Has 120 Blast hits to 120 proteins in 39 species: Archae - 0; Bacteria - 43; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative F13A11.2, Description = Chloroplast inner membrane localized protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00712_1064764-1270197' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00712_1148292-1152602' '(at4g38260 : 278.0) Protein of unknown function (DUF833); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF833 (InterPro:IPR008551); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF833) (TAIR:AT1G20680.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86939 : 190.0) no description available & (gnl|cdd|37553 : 159.0) no description available & (reliability: 556.0) & (original description: Putative glysoja_033684, Description = Ser/Thr-rich protein T10 in DGCR region, PFAM = PF05742)' T '35.2' 'not assigned.unknown' 'niben101scf00712_1576853-1581025' ' no hits & (original description: Putative PGSC0003DMG400009905, Description = BnaC03g60500D protein, PFAM = PF10044)' T '35.2' 'not assigned.unknown' 'niben101scf00713_171769-180702' '(at3g09470 : 498.0) Major facilitator superfamily protein; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); Has 810 Blast hits to 800 proteins in 150 species: Archae - 2; Bacteria - 12; Metazoa - 490; Fungi - 196; Plants - 54; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|38307 : 246.0) no description available & (reliability: 996.0) & (original description: Putative PGSC0003DMG400008924, Description = Ion channel regulatory protein UNC-93, PFAM = PF05978)' T '35.2' 'not assigned.unknown' 'niben101scf00713_557548-558980' ' no hits & (original description: Putative OST4A, Description = Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A, PFAM = PF10215)' T '35.2' 'not assigned.unknown' 'niben101scf00713_558303-565747' '(at2g28780 : 465.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF939, bacterial (InterPro:IPR010343); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09450.1); Has 671 Blast hits to 667 proteins in 305 species: Archae - 0; Bacteria - 588; Metazoa - 0; Fungi - 2; Plants - 66; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 930.0) & (original description: Putative PGSC0003DMG400008846, Description = P-hydroxybenzoic acid efflux pump subunit aaeB, PFAM = PF04632)' T '35.2' 'not assigned.unknown' 'niben101scf00714_627797-632710' '(at2g35790 : 239.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1301 (InterPro:IPR009724); Has 116 Blast hits to 116 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 53; Fungi - 6; Plants - 49; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|39678 : 172.0) no description available & (reliability: 478.0) & (original description: Putative At2g35790, Description = Expressed protein, PFAM = PF06979)' T '35.2' 'not assigned.unknown' 'niben101scf00715_69949-73812' '(at1g80690 : 251.0) PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT5G25170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35545 : 214.0) no description available & (gnl|cdd|69428 : 163.0) no description available & (reliability: 502.0) & (original description: Putative dl4780c, Description = At5g25170, PFAM = PF05903)' T '35.2' 'not assigned.unknown' 'niben101scf00715_921195-926808' '(at1g80860 : 206.0) Encodes a single-copy phospholipid N-methyltransferase, involved in phosphatidylcholine biosynthesis. Has specific activity towards phosphatidylmonomethylethanolamine and phosphatidyldimethylethanolamine, but not phosphatidylethanolamine.; phospholipid N-methyltransferase (PLMT); CONTAINS InterPro DOMAIN/s: Phospholipid methyltransferase (InterPro:IPR007318); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative PLMT, Description = Phosphatidyl-N-methylethanolamine N-methyltransferase, PFAM = PF04191)' T '35.2' 'not assigned.unknown' 'niben101scf00715_927619-935686' '(at1g73060 : 511.0) Low PSII Accumulation 3 (LPA3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1995 (InterPro:IPR018962); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF1995) (TAIR:AT5G48790.1); Has 97 Blast hits to 97 proteins in 32 species: Archae - 0; Bacteria - 18; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|87898 : 142.0) no description available & (reliability: 1022.0) & (original description: Putative LPA3, Description = Protein LOW PSII ACCUMULATION 3, chloroplastic, PFAM = PF09353)' T '35.2' 'not assigned.unknown' 'niben101scf00717_45644-84192' '(at3g14260 : 157.0) Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT1G53890.1); Has 295 Blast hits to 292 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86676 : 140.0) no description available & (reliability: 314.0) & (original description: Putative Ccrd_007917, Description = Initiation factor 2B-related protein, PFAM = PF04525)' T '35.2' 'not assigned.unknown' 'niben101scf00719_50465-54616' '(at2g20670 : 218.0) Protein of unknown function (DUF506) ; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT4G32480.1); Has 375 Blast hits to 373 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 373; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68298 : 205.0) no description available & (reliability: 436.0) & (original description: Putative At2g20670, Description = Expressed protein, PFAM = PF04720)' T '35.2' 'not assigned.unknown' 'niben101scf00725_7619-10226' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00725_330842-333155' ' no hits & (original description: Putative PGSC0003DMG401005708, Description = ATP-dependent helicase/nuclease subunit A isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00725_634797-637864' ' (original description: Putative ATF2, Description = Ethylene-responsive transcription factor RAP2-11, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'niben101scf00725_790019-802846' '(at1g26110 : 121.0) Encodes Decapping 5, required for mRNA decapping, P-body formation and translational repression during postembryonic development.; decapping 5 (DCP5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: negative regulation of translation, deadenylation-independent decapping of nuclear-transcribed mRNA, cytoplasmic mRNA processing body assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DFDF motif (InterPro:IPR019050), FFD/TFG box motif (InterPro:IPR019053); BEST Arabidopsis thaliana protein match is: decapping 5-like (TAIR:AT5G45330.1); Has 14874 Blast hits to 10327 proteins in 603 species: Archae - 12; Bacteria - 902; Metazoa - 6418; Fungi - 2978; Plants - 1226; Viruses - 261; Other Eukaryotes - 3077 (source: NCBI BLink). & (gnl|cdd|36290 : 120.0) no description available & (gnl|cdd|29723 : 119.0) no description available & (reliability: 242.0) & (original description: Putative sum2, Description = Like-Sm ribonucleoprotein (LSM)-related domain protein, PFAM = PF09532;PF12701)' T '35.2' 'not assigned.unknown' 'niben101scf00726_17869-23768' '(at5g13760 : 608.0) Plasma-membrane choline transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF580 (InterPro:IPR007603); BEST Arabidopsis thaliana protein match is: Plasma-membrane choline transporter family protein (TAIR:AT3G04440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68100 : 250.0) no description available & (gnl|cdd|36576 : 245.0) no description available & (reliability: 1216.0) & (original description: Putative BnaC09g54740D, Description = BnaC09g54740D protein, PFAM = PF04515)' T '35.2' 'not assigned.unknown' 'niben101scf00726_54818-60820' ' no hits & (original description: Putative , Description = , PFAM = PF09495)' T '35.2' 'not assigned.unknown' 'niben101scf00730_81062-83595' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00735_672562-676311' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00735_672571-675672' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00735_708571-718606' '(at4g35910 : 471.0) Adenine nucleotide alpha hydrolases-like superfamily protein; CONTAINS InterPro DOMAIN/s: Thiouridylase, cytoplasmic, subunit 2 (InterPro:IPR019407); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37805 : 219.0) no description available & (reliability: 942.0) & (original description: Putative CTU2, Description = Cytoplasmic tRNA 2-thiolation protein 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00736_36123-42192' '(at5g20610 : 689.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26160.1); Has 918 Blast hits to 759 proteins in 180 species: Archae - 6; Bacteria - 105; Metazoa - 264; Fungi - 89; Plants - 167; Viruses - 5; Other Eukaryotes - 282 (source: NCBI BLink). & (reliability: 1378.0) & (original description: Putative PMIR1, Description = Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1, PFAM = PF10358;PF01476)' T '35.2' 'not assigned.unknown' 'niben101scf00737_143792-146136' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00739_197029-217959' ' (original description: Putative ENOD, Description = Early nodulin-93, PFAM = PF03386)' T '35.2' 'not assigned.unknown' 'niben101scf00739_419375-428508' '(at5g20170 : 679.0) RNA polymerase II transcription mediators; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med17 (InterPro:IPR019313); Has 84 Blast hits to 82 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 6; Plants - 33; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 1358.0) & (original description: Putative MED17, Description = Mediator of RNA polymerase II transcription subunit 17, PFAM = PF10156)' T '35.2' 'not assigned.unknown' 'niben101scf00739_438504-446694' '(at2g25570 : 362.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Sel1-like (InterPro:IPR006597); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36763 : 105.0) no description available & (reliability: 724.0) & (original description: Putative , Description = , PFAM = PF08238;PF08238)' T '35.2' 'not assigned.unknown' 'niben101scf00741_135092-148559' '(at4g11720 : 749.0) Encodes HAP2 with the following predicted motifs: an N-terminal secretion signal, a single transmembrane domain and a C-terminal histidine-rich domain. HAP2 is expressed only in the haploid sperm and is required for pollen tube guidance and fertilization. Predominantly localized to sperm endoplasmic reticulum membranes. May also reside in other endomembranes, including the plasma membrane.; HAPLESS 2 (HAP2); CONTAINS InterPro DOMAIN/s: Generative cell specific-1, HAP2-GCS1 (InterPro:IPR018928); Has 2122 Blast hits to 1565 proteins in 270 species: Archae - 6; Bacteria - 421; Metazoa - 806; Fungi - 82; Plants - 227; Viruses - 5; Other Eukaryotes - 575 (source: NCBI BLink). & (reliability: 1498.0) & (original description: Putative HAP2, Description = Protein HAPLESS 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00742_60380-67346' '(at1g11120 : 113.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28170.1); Has 94 Blast hits to 94 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative PGSC0003DMG400022427, Description = BnaA01g35980D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00744_186084-191735' '(at4g30200 : 351.0) Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.; vernalization5/VIN3-like (VEL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vegetative to reproductive phase transition of meristem; LOCATED IN: PcG protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423, plant (InterPro:IPR004082), Fibronectin, type III-like fold (InterPro:IPR008957), Fibronectin, type III (InterPro:IPR003961); BEST Arabidopsis thaliana protein match is: Fibronectin type III domain-containing protein (TAIR:AT5G57380.1). & (reliability: 702.0) & (original description: Putative Sb07g006110, Description = Putative uncharacterized protein Sb07g006110, PFAM = PF07227)' T '35.2' 'not assigned.unknown' 'niben101scf00745_13840-26011' ' no hits & (original description: Putative PGSC0003DMG402007628, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00747_44075-46779' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00747_211586-215685' '(at4g26060 : 112.0) Ribosomal protein L18ae family; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57060.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative At1g54217, Description = Ribosomal protein L18ae family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00747_339480-345244' '(at3g14000 : 405.0) Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity.; ATBRXL2; CONTAINS InterPro DOMAIN/s: Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591); BEST Arabidopsis thaliana protein match is: BREVIS RADIX-like 3 (TAIR:AT1G54180.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 810.0) & (original description: Putative BRXL2, Description = Protein Brevis radix-like 2, PFAM = PF08381;PF08381;PF13713)' T '35.2' 'not assigned.unknown' 'niben101scf00747_941115-953333' '(at1g72390 : 632.0) CONTAINS InterPro DOMAIN/s: Spt20 family (InterPro:IPR021950); Has 8778 Blast hits to 7244 proteins in 477 species: Archae - 6; Bacteria - 326; Metazoa - 4198; Fungi - 1506; Plants - 923; Viruses - 22; Other Eukaryotes - 1797 (source: NCBI BLink). & (gnl|cdd|38804 : 82.1) no description available & (reliability: 1264.0) & (original description: Putative BnaC06g33590D, Description = BnaC06g33590D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00747_1223586-1231343' '(at1g53760 : 279.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2343 (InterPro:IPR018786). & (gnl|cdd|39739 : 209.0) no description available & (reliability: 558.0) & (original description: Putative BnaC06g10300D, Description = BnaC06g10300D protein, PFAM = PF10173)' T '35.2' 'not assigned.unknown' 'niben101scf00750_26592-29796' ' no hits & (original description: Putative PI-1, Description = Ethylene-responsive proteinase inhibitor 1, PFAM = PF00280)' T '35.2' 'not assigned.unknown' 'niben101scf00750_156868-160198' ' no hits & (original description: Putative PI-1, Description = Proteinase inhibitor I-like, PFAM = PF00280)' T '35.2' 'not assigned.unknown' 'niben101scf00750_180874-183169' ' no hits & (original description: Putative , Description = , PFAM = PF14111)' T '35.2' 'not assigned.unknown' 'niben101scf00752_285239-289652' ' no hits & (original description: Putative PGSC0003DMG400009946, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00752_307003-312716' '(at5g42150 : 396.0) Glutathione S-transferase family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutaredoxin active site (InterPro:IPR011767), Thioredoxin-like fold (InterPro:IPR012336); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38239 : 328.0) no description available & (gnl|cdd|48124 : 206.0) no description available & (reliability: 792.0) & (original description: Putative PTGES2, Description = Prostaglandin E synthase 2, PFAM = PF13417;PF00043)' T '35.2' 'not assigned.unknown' 'niben101scf00753_199515-202156' ' no hits & (original description: Putative PGSC0003DMG400012180, Description = AP2/ERF domain-containing protein, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'niben101scf00753_230671-235280' ' no hits & (original description: Putative PGSC0003DMG402013972, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00753_329039-331224' '(at1g55170 : 139.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 13439 Blast hits to 8993 proteins in 828 species: Archae - 344; Bacteria - 1469; Metazoa - 6958; Fungi - 1008; Plants - 683; Viruses - 29; Other Eukaryotes - 2948 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative BnaA06g00500D, Description = BnaA06g00500D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00755_41923-78320' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00756_141681-145108' '(at4g28230 : 167.0) unknown protein; Has 444 Blast hits to 358 proteins in 107 species: Archae - 0; Bacteria - 20; Metazoa - 179; Fungi - 26; Plants - 38; Viruses - 2; Other Eukaryotes - 179 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative At4g28230, Description = At4g28230, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00757_185721-189685' ' no hits & (original description: Putative BnaA05g37490D, Description = BnaA05g37490D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00757_296058-300975' '(gnl|cdd|71335 : 206.0) no description available & (at1g13740 : 163.0) Encodes a member of a small plant-specific gene family whose members interact with ABI5 and appear to be involved in mediating stress responses. AFP2 mutants affect a number of ABA mediated processes such as germination and response to osmotic and sugar stress. AFP2 nuclear localization is stress dependent.; ABI five binding protein 2 (AFP2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1675 (InterPro:IPR012463); BEST Arabidopsis thaliana protein match is: ABI five binding protein (TAIR:AT1G69260.1); Has 207 Blast hits to 201 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 6; Plants - 185; Viruses - 3; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative abac5, Description = Ninja-family protein AFP3, PFAM = PF16136;PF16135;PF07897)' T '35.2' 'not assigned.unknown' 'niben101scf00759_181828-185750' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00761_8038-12660' ' no hits & (original description: Putative , Description = , PFAM = PF00304)' T '35.2' 'not assigned.unknown' 'niben101scf00761_12251-15194' ' no hits & (original description: Putative , Description = , PFAM = PF00304)' T '35.2' 'not assigned.unknown' 'niben101scf00761_18855-21471' ' no hits & (original description: Putative , Description = , PFAM = PF00304)' T '35.2' 'not assigned.unknown' 'niben101scf00761_742139-747632' '(at5g12900 : 455.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 910.0) & (original description: Putative IRKI, Description = IRK-interacting protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00761_757706-759996' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00762_134810-137668' ' no hits & (original description: Putative PGSC0003DMG400045123, Description = Zinc finger containing preotein, putative, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben101scf00765_10663-17963' '(gnl|cdd|37246 : 142.0) no description available & (at5g27740 : 134.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 2775 (EMB2775); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp-loader complex, subunit E, C-terminal (InterPro:IPR019483), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921); BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA) (TAIR:AT1G21690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative Os10g0574500, Description = Os10g0574500 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00765_13227-18879' ' no hits & (original description: Putative , Description = Replication factor C subunit, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00765_246301-249226' ' no hits & (original description: Putative , Description = Zinc finger containing preotein, putative, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben101scf00765_291202-299718' '(at5g17610 : 131.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative BnaC02g07360D, Description = BnaC02g07360D protein, PFAM = PF16029)' T '35.2' 'not assigned.unknown' 'niben101scf00766_93210-98381' '(at1g67850 : 530.0) Protein of unknown function (DUF707); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G13000.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68772 : 503.0) no description available & (reliability: 1060.0) & (original description: Putative At3g26440, Description = AT3G26440 protein, PFAM = PF05212)' T '35.2' 'not assigned.unknown' 'niben101scf00769_141213-143737' '(at4g33100 : 108.0) CONTAINS InterPro DOMAIN/s: Mitochondrial distribution/morphology family 35/apoptosis (InterPro:IPR007918); Has 214 Blast hits to 214 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 69; Plants - 29; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative At4g33100, Description = Uncharacterized protein At4g33100, PFAM = PF05254)' T '35.2' 'not assigned.unknown' 'niben101scf00773_903673-907137' '(at5g05360 : 120.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G38450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00773_1141754-1150220' '(at2g40320 : 595.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 33 (TBL33); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 32 (TAIR:AT3G11030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72785 : 187.0) no description available & (reliability: 1190.0) & (original description: Putative TBL33, Description = Protein trichome birefringence-like 33, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf00773_1324526-1327854' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00773_1408492-1417441' '(at5g05480 : 489.0) Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A (InterPro:IPR021102); BEST Arabidopsis thaliana protein match is: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein (TAIR:AT3G14920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 978.0) & (original description: Putative PGSC0003DMG400027721, Description = Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A, PFAM = PF12222)' T '35.2' 'not assigned.unknown' 'niben101scf00776_285271-288124' '(at3g56290 : 171.0) unknown protein; Has 39 Blast hits to 39 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative PGSC0003DMG400024310, Description = F18O21_250, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00777_28066-31196' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00777_315647-318396' '(at4g15030 : 231.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site protein Fra10Ac1 (InterPro:IPR019129); Has 8498 Blast hits to 5699 proteins in 376 species: Archae - 6; Bacteria - 264; Metazoa - 3838; Fungi - 743; Plants - 650; Viruses - 76; Other Eukaryotes - 2921 (source: NCBI BLink). & (gnl|cdd|36511 : 194.0) no description available & (reliability: 462.0) & (original description: Putative amd1, Description = Cathepsin B-like cysteine proteinase 3, PFAM = PF09725)' T '35.2' 'not assigned.unknown' 'niben101scf00777_321063-323885' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00777_420032-425493' '(at1g34350 : 218.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 436.0) & (original description: Putative At1g34350, Description = At1g34350, PFAM = PF14770)' T '35.2' 'not assigned.unknown' 'niben101scf00777_603997-615025' ' no hits & (original description: Putative pAFD103, Description = PAFD103 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00779_205076-209942' '(at3g10940 : 386.0) dual specificity protein phosphatase (DsPTP1) family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine/serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, dephosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: dual specificity protein phosphatase (DsPTP1) family protein (TAIR:AT3G52180.2); Has 897 Blast hits to 897 proteins in 122 species: Archae - 6; Bacteria - 12; Metazoa - 607; Fungi - 18; Plants - 142; Viruses - 11; Other Eukaryotes - 101 (source: NCBI BLink). & (gnl|cdd|36928 : 116.0) no description available & (reliability: 772.0) & (original description: Putative LSF2, Description = Phosphoglucan phosphatase LSF2, chloroplastic, PFAM = PF00782)' T '35.2' 'not assigned.unknown' 'niben101scf00779_306230-315722' '(at5g05310 : 590.0) TLC ATP/ADP transporter; Has 647 Blast hits to 643 proteins in 131 species: Archae - 0; Bacteria - 265; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (gnl|cdd|33015 : 90.3) no description available & (reliability: 1180.0) & (original description: Putative BnaC09g50020D, Description = BnaC09g50020D protein, PFAM = PF03219)' T '35.2' 'not assigned.unknown' 'niben101scf00780_81319-96668' '(at4g35170 : 193.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41990.1); Has 165 Blast hits to 162 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 165; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 386.0) & (original description: Putative At2g41990, Description = At2g41990, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'niben101scf00780_165036-174895' '(at2g16980 : 342.0) Major facilitator superfamily protein; FUNCTIONS IN: tetracycline transporter activity; INVOLVED IN: response to antibiotic, tetracycline transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Tetracycline resistance protein, TetA (InterPro:IPR001958), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G16970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38027 : 180.0) no description available & (reliability: 684.0) & (original description: Putative ttpl1, Description = Tetracycline transporter-like protein 1, PFAM = PF07690)' T '35.2' 'not assigned.unknown' 'niben101scf00780_312479-324832' ' (original description: Putative PDS2, Description = Amine oxidase, PFAM = PF01593)' T '35.2' 'not assigned.unknown' 'niben101scf00780_314009-325238' ' (original description: Putative PDS2, Description = Phytoene desaturase 2, PFAM = PF01593)' T '35.2' 'not assigned.unknown' 'niben101scf00780_401443-407219' '(at4g29400 : 342.0) Protein of unknown function (DUF3531); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3531 (InterPro:IPR021920); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3531) (TAIR:AT5G08400.2); Has 315 Blast hits to 315 proteins in 83 species: Archae - 0; Bacteria - 120; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 684.0) & (original description: Putative F383_09136, Description = Dna-directed rna polymerase i subunit rpa2, PFAM = PF12049)' T '35.2' 'not assigned.unknown' 'niben101scf00781_676212-679406' ' no hits & (original description: Putative PGSC0003DMG400006802, Description = T6D22.8, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00781_746269-749513' '(at3g09180 : 441.0) CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med27 (InterPro:IPR021627); Has 112 Blast hits to 112 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 882.0) & (original description: Putative MED27, Description = Mediator of RNA polymerase II transcription subunit 27, PFAM = PF11571)' T '35.2' 'not assigned.unknown' 'niben101scf00783_316581-321730' ' no hits & (original description: Putative 80A08_28, Description = 80A08_28, PFAM = PF17181)' T '35.2' 'not assigned.unknown' 'niben101scf00786_30249-33356' '(at5g13140 : 166.0) Pollen Ole e 1 allergen and extensin family protein; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT3G26960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative At5g41050, Description = At5g41050, PFAM = PF01190)' T '35.2' 'not assigned.unknown' 'niben101scf00786_155005-319405' ' no hits & (original description: Putative PGSC0003DMG400020205, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00786_262068-264274' ' no hits & (original description: Putative BnaA08g06830D, Description = BnaA06g16390D protein, PFAM = PF11820)' T '35.2' 'not assigned.unknown' 'niben101scf00786_282998-285068' '(at3g27030 : 98.2) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3339 (InterPro:IPR021775); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF 3339) (TAIR:AT5G40970.1); Has 538 Blast hits to 271 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 534; Viruses - 4; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative BnaC02g36610D, Description = BnaC02g36610D protein, PFAM = PF11820)' T '35.2' 'not assigned.unknown' 'niben101scf00786_305346-307549' ' no hits & (original description: Putative Sb03g039900, Description = Putative uncharacterized protein Sb03g039900, PFAM = PF11820)' T '35.2' 'not assigned.unknown' 'niben101scf00789_46612-52589' '(at4g13370 : 515.0) Plant protein of unknown function (DUF936); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF936, plant (InterPro:IPR010341); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF936) (TAIR:AT3G14170.1); Has 492 Blast hits to 349 proteins in 79 species: Archae - 0; Bacteria - 30; Metazoa - 82; Fungi - 18; Plants - 260; Viruses - 6; Other Eukaryotes - 96 (source: NCBI BLink). & (gnl|cdd|69589 : 212.0) no description available & (reliability: 1030.0) & (original description: Putative At4g13370, Description = At4g13370, PFAM = PF06075)' T '35.2' 'not assigned.unknown' 'niben101scf00792_20566-370023' ' no hits & (original description: Putative HCOI_00186700, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00795_13829-19477' '(at3g12940 : 714.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G19895.1); Has 67 Blast hits to 67 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1428.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00795_19567-25791' '(at3g12930 : 234.0) Lojap-related protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Iojap-related protein (InterPro:IPR004394); Has 4153 Blast hits to 4153 proteins in 1667 species: Archae - 0; Bacteria - 3137; Metazoa - 32; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 916 (source: NCBI BLink). & (q41822|iojap_maize : 196.0) Protein Iojap - Zea mays (Maize) & (gnl|cdd|66128 : 103.0) no description available & (reliability: 468.0) & (original description: Putative IJ, Description = Protein Iojap, chloroplastic, PFAM = PF02410)' T '35.2' 'not assigned.unknown' 'niben101scf00797_1602680-1675683' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf00797_1858800-1865315' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00798_35057-39334' '(at1g11120 : 125.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28170.1); Has 94 Blast hits to 94 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative PGSC0003DMG400005033, Description = BnaA01g35980D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00799_94116-100786' '(at1g21722 : 98.2) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78922.1); Has 47 Blast hits to 47 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 1; Plants - 42; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00799_398948-401517' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00801_176587-179891' '(at2g41200 : 124.0) unknown protein; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative At2g41200, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00801_367653-371119' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf00803_106871-109143' ' no hits & (original description: Putative PGSC0003DMG400014879, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00805_37903-41143' ' no hits & (original description: Putative pol, Description = Polyprotein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00807_163121-167351' ' no hits & (original description: Putative PGSC0003DMG400016410, Description = , PFAM = PF05699)' T '35.2' 'not assigned.unknown' 'niben101scf00807_163163-167233' ' no hits & (original description: Putative BH1, Description = HAT family dimerisation domain containing protein, PFAM = PF05699)' T '35.2' 'not assigned.unknown' 'niben101scf00809_60199-73836' '(at2g43780 : 84.3) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30 Blast hits to 30 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative At2g43780, Description = At2g43780/F18O19.11, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00809_84110-86531' '(at2g31725 : 117.0) Eukaryotic protein of unknown function (DUF842); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF842, eukaryotic (InterPro:IPR008560); BEST Arabidopsis thaliana protein match is: Eukaryotic protein of unknown function (DUF842) (TAIR:AT1G05730.1); Has 259 Blast hits to 259 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 173; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|86955 : 86.6) no description available & (gnl|cdd|38587 : 82.7) no description available & (reliability: 234.0) & (original description: Putative pco128617, Description = DUF842 domain protein, PFAM = PF05811)' T '35.2' 'not assigned.unknown' 'niben101scf00809_242417-248874' '(at1g48170 : 176.0) unknown protein; Has 78 Blast hits to 78 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 30; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative At1g48170, Description = Putative uncharacterized protein At1g48170, PFAM = PF16093)' T '35.2' 'not assigned.unknown' 'niben101scf00812_58054-65756' '(at5g52110 : 294.0) HIGH CHLOROPHYLL FLUORESCENCE 208 (HCF208); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2930 (InterPro:IPR021325); Has 125 Blast hits to 125 proteins in 55 species: Archae - 0; Bacteria - 72; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 588.0) & (original description: Putative CCB2, Description = Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic, PFAM = PF11152)' T '35.2' 'not assigned.unknown' 'niben101scf00812_59534-65753' '(at5g52110 : 294.0) HIGH CHLOROPHYLL FLUORESCENCE 208 (HCF208); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2930 (InterPro:IPR021325); Has 125 Blast hits to 125 proteins in 55 species: Archae - 0; Bacteria - 72; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 588.0) & (original description: Putative CCB2, Description = Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic, PFAM = PF11152)' T '35.2' 'not assigned.unknown' 'niben101scf00813_128355-141956' '(at2g16485 : 787.0) nucleic acid binding;zinc ion binding;DNA binding; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: histone modification, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Plus-3 domain, subgroup (InterPro:IPR018144), Zinc finger, PHD-type (InterPro:IPR001965), GYF (InterPro:IPR003169), SWIB/MDM2 domain (InterPro:IPR003121), Plus-3 (InterPro:IPR004343), SWIB domain (InterPro:IPR019835), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding (TAIR:AT3G51120.1); Has 38357 Blast hits to 25980 proteins in 1833 species: Archae - 670; Bacteria - 4778; Metazoa - 14464; Fungi - 4561; Plants - 3104; Viruses - 298; Other Eukaryotes - 10482 (source: NCBI BLink). & (gnl|cdd|37157 : 156.0) no description available & (gnl|cdd|47987 : 130.0) no description available & (reliability: 1574.0) & (original description: Putative BnaA09g08750D, Description = BnaA09g08750D protein, PFAM = PF02201;PF02213;PF03126)' T '35.2' 'not assigned.unknown' 'niben101scf00817_325675-332012' '(at4g01080 : 469.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 26 (TBL26); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 25 (TAIR:AT1G01430.1); Has 1341 Blast hits to 1324 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1336; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|72785 : 159.0) no description available & (reliability: 938.0) & (original description: Putative TBL25, Description = Protein trichome birefringence-like 25, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf00817_327100-332226' '(at1g01430 : 262.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 25 (TBL25); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 26 (TAIR:AT4G01080.1); Has 1353 Blast hits to 1335 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 6; Plants - 1340; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 524.0) & (original description: Putative TBL23, Description = Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein, PFAM = PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf00817_385783-392426' ' (original description: Putative hm2, Description = Putative NADPH HC toxin reductase, PFAM = PF16363)' T '35.2' 'not assigned.unknown' 'niben101scf00819_396728-400296' '(at5g05360 : 129.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G38450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00819_808310-811106' '(at3g56180 : 165.0) Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT3G10986.1); Has 252 Blast hits to 250 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 250; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86676 : 131.0) no description available & (reliability: 330.0) & (original description: Putative At3g56180, Description = Protein LURP-one-related 14, PFAM = PF04525)' T '35.2' 'not assigned.unknown' 'niben101scf00819_963986-971514' '(at2g40430 : 178.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tumour suppressor protein Gltscr2 (InterPro:IPR011211), P60-like (InterPro:IPR011687). & (gnl|cdd|38034 : 140.0) no description available & (gnl|cdd|71208 : 94.7) no description available & (reliability: 356.0) & (original description: Putative pco134590, Description = Putative gltscr2-domain family protein isoform 1, PFAM = PF07767)' T '35.2' 'not assigned.unknown' 'niben101scf00819_1113315-1133930' '(at3g56210 : 150.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024). & (reliability: 300.0) & (original description: Putative TCM_042405, Description = ARM repeat superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00819_1136829-1139964' '(at2g40435 : 108.0) BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative Os07g0676600, Description = Os07g0676600 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00819_1355178-1362475' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00820_14666-17678' '(at1g65295 : 108.0) unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01015.1); Has 90 Blast hits to 90 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative CRP1, Description = BnaC06g27010D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00820_19661-29454' '(at4g18530 : 451.0) Protein of unknown function (DUF707); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT4G12840.2); Has 310 Blast hits to 308 proteins in 22 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 303; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68772 : 337.0) no description available & (reliability: 902.0) & (original description: Putative gpm621, Description = Lysine ketoglutarate reductase trans-splicing related 1, PFAM = PF05212)' T '35.2' 'not assigned.unknown' 'niben101scf00820_616468-619088' ' no hits & (original description: Putative PGSC0003DMG400000290, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00820_782774-792123' '(at5g10320 : 357.0) unknown protein; Has 51 Blast hits to 50 proteins in 17 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 714.0) & (original description: Putative , Description = Polyadenylate-binding protein 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00820_812961-819928' '(at5g65250 : 164.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative BnaAnng04740D, Description = BnaAnng04740D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00821_795359-800158' ' no hits & (original description: Putative PGSC0003DMG400001936, Description = 18S pre-ribosomal assembly protein gar2-related, putative isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00821_1195569-1202767' '(at3g29010 : 257.0) Biotin/lipoate A/B protein ligase family; FUNCTIONS IN: catalytic activity; INVOLVED IN: protein modification process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Biotin/lipoate A/B protein ligase (InterPro:IPR004143); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38369 : 124.0) no description available & (gnl|cdd|30444 : 88.5) no description available & (reliability: 514.0) & (original description: Putative lplA, Description = Putative lipoate-protein ligase A, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00821_1285825-1288229' ' no hits & (original description: Putative FIL1, Description = Stamen-specific protein FIL1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00821_1690250-1701134' '(at1g27435 : 96.3) unknown protein; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative , Description = , PFAM = PF09784)' T '35.2' 'not assigned.unknown' 'niben101scf00822_180122-192578' ' no hits & (original description: Putative PGSC0003DMG400001876, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00822_186841-193423' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00822_279372-282877' '(at4g39840 : 305.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 20719 Blast hits to 6096 proteins in 607 species: Archae - 22; Bacteria - 3243; Metazoa - 4364; Fungi - 2270; Plants - 237; Viruses - 128; Other Eukaryotes - 10455 (source: NCBI BLink). & (reliability: 610.0) & (original description: Putative BnaA01g34680D, Description = BnaA01g34680D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00825_28160-51782' '(at5g46400 : 472.0) PRP39-2; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G04080.1); Has 41473 Blast hits to 19964 proteins in 957 species: Archae - 8; Bacteria - 2112; Metazoa - 13232; Fungi - 4812; Plants - 3812; Viruses - 173; Other Eukaryotes - 17324 (source: NCBI BLink). & (gnl|cdd|36472 : 358.0) no description available & (reliability: 944.0) & (original description: Putative At5g46400, Description = Pre-mRNA-processing factor 39, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00825_268696-272389' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00830_322368-327621' '(at3g18150 : 107.0) RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT3G03360.1); Has 2180 Blast hits to 2140 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 2174; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative , Description = , PFAM = PF08387)' T '35.2' 'not assigned.unknown' 'niben101scf00830_463899-466626' ' no hits & (original description: Putative At2g06320, Description = Pol polyprotein, PFAM = PF00665)' T '35.2' 'not assigned.unknown' 'niben101scf00837_759179-761589' ' no hits & (original description: Putative PGSC0003DMG400009937, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00837_823097-826176' ' no hits & (original description: Putative PGSC0003DMG400041029, Description = Bcl-2-associated athanogene-like protein, PFAM = PF02179)' T '35.2' 'not assigned.unknown' 'niben101scf00837_1003955-1033068' '(at1g30755 : 469.0) Protein of unknown function (DUF668); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700), Protein of unknown function DUF3475 (InterPro:IPR021864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT1G34320.1); Has 465 Blast hits to 399 proteins in 71 species: Archae - 2; Bacteria - 14; Metazoa - 66; Fungi - 16; Plants - 336; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|68572 : 111.0) no description available & (reliability: 938.0) & (original description: Putative At1g34320, Description = DUF668 family protein, PFAM = PF05003;PF11961)' T '35.2' 'not assigned.unknown' 'niben101scf00839_9718-20745' '(at3g50370 : 810.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; Has 27734 Blast hits to 16708 proteins in 1259 species: Archae - 81; Bacteria - 3434; Metazoa - 10876; Fungi - 2514; Plants - 987; Viruses - 212; Other Eukaryotes - 9630 (source: NCBI BLink). & (reliability: 1620.0) & (original description: Putative TCM_000604, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00839_119970-129192' '(at4g37020 : 248.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1). & (reliability: 496.0) & (original description: Putative glysoja_003347, Description = Eukaryotic initiation factor 4A, PFAM = PF00271)' T '35.2' 'not assigned.unknown' 'niben101scf00839_306596-493636' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf00839_345941-348717' ' no hits & (original description: Putative , Description = Putative membrane-associated kinase regulator 1-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00841_331869-344645' ' (original description: Putative PGSC0003DMG400007133, Description = DUF2146 family protein, PFAM = PF10220;PF10220;PF10220;PF10220)' T '35.2' 'not assigned.unknown' 'niben101scf00842_60036-64524' ' (original description: Putative Os03g0287100, Description = Phosphatidylinositol transfer protein 2, PFAM = PF02121)' T '35.2' 'not assigned.unknown' 'niben101scf00842_71196-74107' ' no hits & (original description: Putative , Description = Zinc finger containing preotein, putative, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben101scf00842_83195-85638' ' (original description: Putative LgRT3, Description = Reverse transcriptases, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf00844_115250-117830' '(at1g48720 : 100.0) unknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative At1g48720, Description = At1g48720, PFAM = PF13961;PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf00849_204977-207288' ' no hits & (original description: Putative orf104, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00850_148342-158046' '(at1g13990 : 283.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3110 (InterPro:IPR021503); Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 566.0) & (original description: Putative , Description = F16A14.21, PFAM = PF11360)' T '35.2' 'not assigned.unknown' 'niben101scf00851_431685-434071' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00851_435931-439692' '(at5g20935 : 122.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3148 (InterPro:IPR021495); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative , Description = TIR-NBS-LRR type disease resistance protein, putative, PFAM = PF11347)' T '35.2' 'not assigned.unknown' 'niben101scf00852_15285-20366' '(at4g22758 : 100.0) unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G27830.1). & (reliability: 200.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00853_178211-183668' '(at5g67550 : 285.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71110.1); Has 161 Blast hits to 154 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 570.0) & (original description: Putative PGSC0003DMG400021416, Description = BnaA09g07310D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00853_445521-448096' ' no hits & (original description: Putative PGSC0003DMG401021419, Description = Late embryogenesis abundant protein, LEA-14, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'niben101scf00854_1256891-1259202' ' no hits & (original description: Putative orf104c, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00856_232028-236160' ' no hits & (original description: Putative PGSC0003DMG400027498, Description = Alpha crystallin/Hsp20 domain-containing protein, PFAM = PF00011)' T '35.2' 'not assigned.unknown' 'niben101scf00858_648830-652014' '(at5g54530 : 186.0) Protein of unknown function, DUF538; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT1G61667.1); Has 418 Blast hits to 418 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 418; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86647 : 119.0) no description available & (reliability: 372.0) & (original description: Putative mc304, Description = Transmembrane protein, putative, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben101scf00861_388033-390596' ' no hits & (original description: Putative PMEI, Description = Petin methylesterase inhibitor, PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'niben101scf00861_589825-592313' ' no hits & (original description: Putative BnaAnng01690D, Description = BnaAnng01690D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00862_339932-347657' '(at5g16790 : 244.0) Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.; THO7; CONTAINS InterPro DOMAIN/s: Tho complex subunit 7 (InterPro:IPR018018), Tho complex subunit 7/Mft1p (InterPro:IPR008501); BEST Arabidopsis thaliana protein match is: Tho complex subunit 7/Mft1p (TAIR:AT3G02950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38425 : 185.0) no description available & (gnl|cdd|86900 : 111.0) no description available & (reliability: 488.0) & (original description: Putative THO7A, Description = THO complex subunit 7A, PFAM = PF05615)' T '35.2' 'not assigned.unknown' 'niben101scf00863_658611-661520' '(at1g65295 : 112.0) unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01015.1); Has 90 Blast hits to 90 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative CRP1, Description = BnaC06g27010D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00863_781086-784813' ' no hits & (original description: Putative PGSC0003DMG400016167, Description = ROP-interactive CRIB motif protein, PFAM = PF00786)' T '35.2' 'not assigned.unknown' 'niben101scf00863_1363895-1366388' ' no hits & (original description: Putative , Description = , PFAM = PF06839)' T '35.2' 'not assigned.unknown' 'niben101scf00863_1786085-1789916' '(at1g65420 : 137.0) Chloroplast localized YCF20-like gene involved in nonphotochemical quenching. Has overlapping functions with npq6.; NONPHOTOCHEMICAL QUENCHING 7 (NPQ7); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF565 (InterPro:IPR007572); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF565) (TAIR:AT3G56830.1); Has 195 Blast hits to 195 proteins in 63 species: Archae - 0; Bacteria - 57; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|68068 : 81.8) no description available & (reliability: 274.0) & (original description: Putative ycf20, Description = Uncharacterized protein ycf20, PFAM = PF04483)' T '35.2' 'not assigned.unknown' 'niben101scf00868_613438-616520' '(at1g45688 : 230.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative BnaA06g14560D, Description = BnaA06g14560D protein, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'niben101scf00869_194441-202690' '(at2g41770 : 1018.0) Protein of unknown function (DUF288); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF288 (InterPro:IPR005049); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF288) (TAIR:AT3G57420.1); Has 196 Blast hits to 196 proteins in 30 species: Archae - 2; Bacteria - 9; Metazoa - 51; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 2036.0) & (original description: Putative At2g41770, Description = Putative ovule protein, PFAM = PF03385)' T '35.2' 'not assigned.unknown' 'niben101scf00870_375014-377694' ' no hits & (original description: Putative , Description = Late embryogenesis abundant protein LEA3-4, PFAM = PF03242)' T '35.2' 'not assigned.unknown' 'niben101scf00870_529677-534394' ' no hits & (original description: Putative , Description = , PFAM = PF05564)' T '35.2' 'not assigned.unknown' 'niben101scf00870_941513-946733' '(at1g72490 : 202.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17400.1); Has 75 Blast hits to 75 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 4; Plants - 58; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative BnaC05g13550D, Description = BnaC05g13550D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00870_1087310-1089828' '(at1g72510 : 154.0) Protein of unknown function (DUF1677); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1677, plant (InterPro:IPR012876); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1677) (TAIR:AT2G09970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|71349 : 121.0) no description available & (reliability: 308.0) & (original description: Putative , Description = Arginine--tRNA ligase, PFAM = PF07911)' T '35.2' 'not assigned.unknown' 'niben101scf00870_1267837-1270217' '(at1g54120 : 87.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14060.1); Has 23 Blast hits to 23 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00870_1532892-1537362' '(at4g26060 : 114.0) Ribosomal protein L18ae family; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57060.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative PGSC0003DMG400004856, Description = Ribosomal protein L18ae family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00870_1618784-1621083' ' no hits & (original description: Putative , Description = , PFAM = PF12023)' T '35.2' 'not assigned.unknown' 'niben101scf00870_1640841-1643467' ' no hits & (original description: Putative glysoja_048546, Description = Retrotransposon gag protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00870_1643731-1646078' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00872_234800-237797' ' (original description: Putative NBS391R, Description = Putative ovule protein, PFAM = PF00931)' T '35.2' 'not assigned.unknown' 'niben101scf00873_104661-108652' ' no hits & (original description: Putative , Description = Prefoldin chaperone subunit family protein, putative isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00873_216741-219867' '(at4g32480 : 216.0) Protein of unknown function (DUF506) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT2G20670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68298 : 176.0) no description available & (reliability: 432.0) & (original description: Putative At2g20670, Description = Expressed protein, PFAM = PF04720)' T '35.2' 'not assigned.unknown' 'niben101scf00878_271677-285762' '(at2g45000 : 327.0) EMBRYO DEFECTIVE 2766 (EMB2766); FUNCTIONS IN: structural constituent of nuclear pore; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, nuclear pore; CONTAINS InterPro DOMAIN/s: Nucleoporin, Nsp1-like, C-terminal (InterPro:IPR007758); Has 235342 Blast hits to 95277 proteins in 3388 species: Archae - 819; Bacteria - 58190; Metazoa - 65863; Fungi - 46438; Plants - 10106; Viruses - 2707; Other Eukaryotes - 51219 (source: NCBI BLink). & (gnl|cdd|37407 : 90.1) no description available & (reliability: 654.0) & (original description: Putative NUP62, Description = Nuclear pore glycoprotein p62, PFAM = PF05064)' T '35.2' 'not assigned.unknown' 'niben101scf00878_556156-559187' '(at3g60520 : 100.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02070.1); Has 107 Blast hits to 107 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative TCM_005618, Description = Late cornified envelope protein 1E, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00879_295815-299024' '(at2g20875 : 94.7) Encodes a secretory peptide EPF1 involved in stomatal development. EPF1 is related to EPF2 which controls asymmetric cell divisions during stomatal devlopment.; EPIDERMAL PATTERNING FACTOR 1 (EPF1); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71866.1); Has 74 Blast hits to 74 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative EPF1, Description = Epidermal patterning factor 1, PFAM = PF17181)' T '35.2' 'not assigned.unknown' 'niben101scf00879_318570-323003' '(at4g03420 : 419.0) Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G03610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69161 : 409.0) no description available & (reliability: 838.0) & (original description: Putative F9H3.4, Description = Putative uncharacterized protein AT4g03420, PFAM = PF05623)' T '35.2' 'not assigned.unknown' 'niben101scf00883_216741-219460' ' no hits & (original description: Putative PGSC0003DMG400000717, Description = , PFAM = PF14364)' T '35.2' 'not assigned.unknown' 'niben101scf00883_380583-385209' ' no hits & (original description: Putative , Description = , PFAM = PF06404)' T '35.2' 'not assigned.unknown' 'niben101scf00883_654563-656985' ' no hits & (original description: Putative FGENESH1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00883_1428408-1493993' '(at4g38760 : 1643.0) Protein of unknown function (DUF3414); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3414 (InterPro:IPR021827); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10845.1); Has 113 Blast hits to 108 proteins in 52 species: Archae - 0; Bacteria - 2; Metazoa - 61; Fungi - 10; Plants - 37; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|40030 : 405.0) no description available & (reliability: 3286.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00885_1554316-1557999' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00887_406515-408868' '(at2g25720 : 88.6) unknown protein; Has 38 Blast hits to 38 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative At2g25720, Description = At2g25720, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00887_444516-456046' '(at3g17680 : 114.0) Kinase interacting (KIP1-like) family protein; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT1G48405.1). & (reliability: 228.0) & (original description: Putative PGSC0003DMG400010158, Description = Kinase interacting (KIP1-like) family protein, PFAM = PF07765)' T '35.2' 'not assigned.unknown' 'niben101scf00890_182982-185182' ' no hits & (original description: Putative PGSC0003DMG400016865, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00894_100636-114687' '(at5g16030 : 178.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative At3g02500, Description = BnaA03g05810D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00894_116189-125701' '(at5g38690 : 216.0) Zinc-finger domain of monoamine-oxidase A repressor R1 protein; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), DDT domain, subgroup (InterPro:IPR018500), Cell division cycle-associated protein (InterPro:IPR018866); BEST Arabidopsis thaliana protein match is: Zinc-finger domain of monoamine-oxidase A repressor R1 protein (TAIR:AT1G67270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative cdca7, Description = Cell division cycle-associated 7-like protein, PFAM = PF15612;PF10497)' T '35.2' 'not assigned.unknown' 'niben101scf00894_288539-290971' '(at1g67080 : 214.0) Encodes a protein involved in the photoprotection of PSII. An aba4-1 mutant completely lacks neoxanthin,a component of the chromophore of the peripheral antenna system in PSII. ABA4 is required for neoxanthin biosynthesis, an intermediary step in abscisic acid biosynthesis, but no catalytic activity has been detected for the ABA4 protein.; abscisic acid (ABA)-deficient 4 (ABA4); INVOLVED IN: abscisic acid biosynthetic process, regulation of superoxide anion generation, xanthophyll metabolic process, photoprotection; LOCATED IN: PSII associated light-harvesting complex II, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 723 Blast hits to 723 proteins in 64 species: Archae - 0; Bacteria - 78; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 587 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative NS, Description = Neoxanthin synthase, PFAM = PF14108)' T '35.2' 'not assigned.unknown' 'niben101scf00894_490133-492909' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00895_125855-129873' '(at3g15095 : 105.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative hcf243, Description = Chloroplast protein HCF243, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00897_22998-145824' ' no hits & (original description: Putative Sb01g029366, Description = Retrotransposon protein, putative, Ty1-copia subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00897_374012-377967' '(at2g30900 : 328.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 43 (TBL43); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 42 (TAIR:AT1G78710.1); Has 1340 Blast hits to 1315 proteins in 29 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 1338; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 140.0) no description available & (reliability: 656.0) & (original description: Putative gal2, Description = Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf00898_159271-168176' '(at1g27150 : 582.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G27110.1); Has 429 Blast hits to 423 proteins in 137 species: Archae - 5; Bacteria - 191; Metazoa - 78; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). & (gnl|cdd|37821 : 310.0) no description available & (reliability: 1164.0) & (original description: Putative MTR_5g037400, Description = TPR-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00898_297426-303484' '(at1g27100 : 421.0) Actin cross-linking protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF569 (InterPro:IPR007679), Actin cross-linking (InterPro:IPR008999); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF569) (TAIR:AT1G69890.1); Has 362 Blast hits to 223 proteins in 29 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 10; Plants - 341; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|68182 : 231.0) no description available & (reliability: 842.0) & (original description: Putative At1g27100, Description = Putative ovule protein, PFAM = PF14223;PF04601;PF04601)' T '35.2' 'not assigned.unknown' 'niben101scf00904_70350-76807' '(at5g65740 : 374.0) zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Fanconi anemia complex, subunit FancL, WD-repeat region (InterPro:IPR019162). & (gnl|cdd|38478 : 193.0) no description available & (reliability: 748.0) & (original description: Putative At5g65740, Description = AT5G65740 protein, PFAM = PF11793;PF09765)' T '35.2' 'not assigned.unknown' 'niben101scf00904_77636-80169' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00904_92891-95127' ' no hits & (original description: Putative RPL39C, Description = 60S ribosomal protein L39-3, PFAM = PF00832)' T '35.2' 'not assigned.unknown' 'niben101scf00904_303855-310078' '(at2g22720 : 82.8) SPT2 chromatin protein; CONTAINS InterPro DOMAIN/s: Chromatin SPT2 (InterPro:IPR013256); BEST Arabidopsis thaliana protein match is: SPT2 chromatin protein (TAIR:AT4G37860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative glysoja_040091, Description = 60S ribosomal protein L24, PFAM = PF08243)' T '35.2' 'not assigned.unknown' 'niben101scf00905_1053709-1056359' ' no hits & (original description: Putative PGSC0003DMG400018306, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00905_1348281-1350847' '(at4g28310 : 99.8) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 199.6) & (original description: Putative PGSC0003DMG400013144, Description = Os06g0115700 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00905_1667005-1674122' '(at4g23020 : 90.1) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11780.1). & (reliability: 180.2) & (original description: Putative PGSC0003DMG400022757, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00905_1704492-1706911' ' (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf00911_182638-185245' '(at3g44150 : 239.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11800.1); Has 76 Blast hits to 75 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 478.0) & (original description: Putative At3g11800, Description = BnaA05g27300D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00911_537740-540574' ' no hits & (original description: Putative PGSC0003DMG400021340, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00911_590804-593290' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00914_68796-74103' '(at5g35320 : 89.0) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00916_12982-19746' '(at2g24290 : 222.0) Protein of unknown function (DUF1068); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1068 (InterPro:IPR010471); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1068) (TAIR:AT4G30996.1); Has 111 Blast hits to 111 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 110; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|37034 : 148.0) no description available & (gnl|cdd|69860 : 130.0) no description available & (reliability: 444.0) & (original description: Putative At2g24290, Description = Expressed protein, PFAM = PF06364)' T '35.2' 'not assigned.unknown' 'niben101scf00919_258289-269668' '(at5g10010 : 381.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64910.1); Has 33260 Blast hits to 16857 proteins in 1270 species: Archae - 88; Bacteria - 3040; Metazoa - 11915; Fungi - 3137; Plants - 1371; Viruses - 424; Other Eukaryotes - 13285 (source: NCBI BLink). & (reliability: 762.0) & (original description: Putative BnaC09g46690D, Description = BnaC09g46690D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00920_106199-115700' '(at4g13200 : 95.1) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 97 Blast hits to 97 proteins in 46 species: Archae - 0; Bacteria - 65; Metazoa - 2; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative si707103b11b, Description = Uncharacterized protein At4g13200, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00920_250210-268019' '(at5g48830 : 385.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 770.0) & (original description: Putative BnaC07g26780D, Description = BnaC07g26780D protein, PFAM = PF12452;PF12452)' T '35.2' 'not assigned.unknown' 'niben101scf00920_975959-980910' '(at4g13150 : 238.0) unknown protein; Has 83 Blast hits to 82 proteins in 37 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 476.0) & (original description: Putative BnaA05g19040D, Description = BnaA05g19040D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00925_79166-89349' '(at1g14590 : 374.0) Nucleotide-diphospho-sugar transferase family protein; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT2G02061.1); Has 314 Blast hits to 308 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 294; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 748.0) & (original description: Putative At1g28700, Description = Expressed protein, PFAM = PF03407)' T '35.2' 'not assigned.unknown' 'niben101scf00925_199426-272796' '(at4g31115 : 223.0) Protein of unknown function (DUF1997); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1997 (InterPro:IPR018971); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1997) (TAIR:AT5G04440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87911 : 122.0) no description available & (reliability: 446.0) & (original description: Putative , Description = , PFAM = PF09366)' T '35.2' 'not assigned.unknown' 'niben101scf00926_128705-134751' '(at3g49720 : 352.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 704.0) & (original description: Putative Sb03g006320, Description = Putative uncharacterized protein Sb03g006320, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00926_298094-310899' '(at1g58520 : 760.0) RXW8; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G59406.1); Has 3216 Blast hits to 3174 proteins in 135 species: Archae - 0; Bacteria - 157; Metazoa - 0; Fungi - 2; Plants - 3048; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|36349 : 454.0) no description available & (gnl|cdd|66403 : 344.0) no description available & (reliability: 1520.0) & (original description: Putative RXW8, Description = CSC1-like protein RXW8, PFAM = PF13967;PF14703;PF02714)' T '35.2' 'not assigned.unknown' 'niben101scf00929_122701-125780' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00929_147278-152318' '(at1g19330 : 292.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75060.1). & (reliability: 584.0) & (original description: Putative BnaC05g14960D, Description = BnaC05g14960D protein, PFAM = PF13867)' T '35.2' 'not assigned.unknown' 'niben101scf00929_261053-267949' ' no hits & (original description: Putative PGSC0003DMG400027855, Description = , PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'niben101scf00935_31083-39758' '(at1g68390 : 436.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT1G68380.1); Has 622 Blast hits to 618 proteins in 34 species: Archae - 0; Bacteria - 10; Metazoa - 12; Fungi - 1; Plants - 563; Viruses - 9; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|86287 : 430.0) no description available & (reliability: 872.0) & (original description: Putative T2E12.7, Description = Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben101scf00936_334813-337541' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00938_120830-123155' ' no hits & (original description: Putative , Description = Zinc finger containing preotein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00941_12872-47560' '(at1g71820 : 1194.0) Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.; SEC6; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen germination, pollen tube growth; LOCATED IN: cytosol, exocyst; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Exocyst complex component Sec6 (InterPro:IPR010326). & (gnl|cdd|87009 : 540.0) no description available & (gnl|cdd|37497 : 470.0) no description available & (reliability: 2388.0) & (original description: Putative SEC6, Description = Exocyst complex component SEC6, PFAM = PF06046)' T '35.2' 'not assigned.unknown' 'niben101scf00941_76318-79261' ' no hits & (original description: Putative , Description = , PFAM = PF17232)' T '35.2' 'not assigned.unknown' 'niben101scf00941_332410-337247' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00941_383132-386714' '(at1g34245 : 102.0) Encodes a secretory peptide EPF2 expressed in proliferating cells of the stomatal lineage, known as meristemoids, and in guard mother cells, the progenitors of stomata. Controls asymmetric cell divisions during stomatal development. EPF2 is related to EPF1, also involved in stomatal development.; EPIDERMAL PATTERNING FACTOR 2 (EPF2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: stomatal complex development, guard cell differentiation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71866.1); Has 42 Blast hits to 42 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative EPF2, Description = EPF-like protein 7, PFAM = PF17181)' T '35.2' 'not assigned.unknown' 'niben101scf00941_576913-586485' '(at4g08540 : 530.0) DNA-directed RNA polymerase II protein; BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase II protein (TAIR:AT1G77890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1060.0) & (original description: Putative BnaC06g38420D, Description = BnaC06g38420D protein, PFAM = PF10186)' T '35.2' 'not assigned.unknown' 'niben101scf00944_47688-50198' ' no hits & (original description: Putative , Description = , PFAM = PF09331)' T '35.2' 'not assigned.unknown' 'niben101scf00944_55640-70356' '(at4g01897 : 160.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF952 (InterPro:IPR009297); Has 763 Blast hits to 763 proteins in 180 species: Archae - 0; Bacteria - 351; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 383 (source: NCBI BLink). & (gnl|cdd|69620 : 113.0) no description available & (reliability: 320.0) & (original description: Putative At4g01897, Description = At4g01897, PFAM = PF06108)' T '35.2' 'not assigned.unknown' 'niben101scf00944_246623-250584' '(at2g20515 : 158.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; Has 71 Blast hits to 71 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative At2g20515, Description = At2g20515, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00949_269278-271957' '(at2g27830 : 158.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits to 131 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00951_100069-103668' '(at2g14045 : 109.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown. & (reliability: 218.0) & (original description: Putative mycbp, Description = C-Myc-binding protein homolog, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00953_468907-472829' '(at1g10020 : 322.0) Protein of unknown function (DUF1005); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1005 (InterPro:IPR010410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1005) (TAIR:AT4G29310.1); Has 158 Blast hits to 158 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 6; Plants - 144; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|69725 : 236.0) no description available & (reliability: 644.0) & (original description: Putative At3g19680, Description = At5g17640, PFAM = PF06219)' T '35.2' 'not assigned.unknown' 'niben101scf00953_483330-486898' ' no hits & (original description: Putative At4g33740, Description = Putative myb-like protein X-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00953_664869-669731' ' no hits & (original description: Putative PGSC0003DMG400001291, Description = BnaA06g11160D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00955_54763-59090' '(at2g01990 : 130.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G14630.1); Has 118 Blast hits to 118 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00955_461394-526985' ' no hits & (original description: Putative TCM_045071, Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, putative, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'niben101scf00956_229252-231716' ' no hits & (original description: Putative tic, Description = Os02g0747400 protein, PFAM = PF03634)' T '35.2' 'not assigned.unknown' 'niben101scf00959_11217-13597' ' no hits & (original description: Putative GDU1, Description = BnaAnng40800D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00959_108192-110518' ' no hits & (original description: Putative PGSC0003DMG400001476, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00959_157004-159729' ' no hits & (original description: Putative pol, Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf00960_138341-141631' ' no hits & (original description: Putative orf135, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00960_767719-774449' ' no hits & (original description: Putative PGSC0003DMG400002972, Description = , PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf00961_209537-216690' '(at5g11600 : 95.1) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative TCM_047092, Description = Translation initiation factor IF-2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00961_308812-317970' ' no hits & (original description: Putative PGSC0003DMG401018585, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00961_475123-481475' '(at2g25737 : 461.0) Sulfite exporter TauE/SafE family protein; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF81 (InterPro:IPR002781); BEST Arabidopsis thaliana protein match is: Sulfite exporter TauE/SafE family protein (TAIR:AT2G36630.1); Has 3417 Blast hits to 2961 proteins in 724 species: Archae - 129; Bacteria - 1927; Metazoa - 0; Fungi - 0; Plants - 198; Viruses - 0; Other Eukaryotes - 1163 (source: NCBI BLink). & (reliability: 922.0) & (original description: Putative BnaC03g72820D, Description = BnaC03g72820D protein, PFAM = PF01925;PF01925)' T '35.2' 'not assigned.unknown' 'niben101scf00962_222519-232793' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00963_477740-485811' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00963_533350-559609' '(at5g43680 : 162.0) unknown protein; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 324.0) & (original description: Putative At5g43680, Description = AT5g43680/MQO24_4, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00966_34137-37063' ' no hits & (original description: Putative PGSC0003DMG400000971, Description = Putative ovule protein, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'niben101scf00966_307144-309639' ' no hits & (original description: Putative , Description = Putative F-box domain containing protein, identical, PFAM = PF00646)' T '35.2' 'not assigned.unknown' 'niben101scf00971_164866-175868' '(at5g04480 : 1167.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biosynthetic process; LOCATED IN: Golgi apparatus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: glycosyl transferase family 1 protein (TAIR:AT4G01210.1). & (reliability: 2334.0) & (original description: Putative At5g04480, Description = AT5g04480/T32M21_80, PFAM = PF00534)' T '35.2' 'not assigned.unknown' 'niben101scf00972_15018-21200' ' no hits & (original description: Putative C3H24, Description = Zinc finger CCCH domain-containing protein 38, PFAM = PF14608;PF14608;PF00642)' T '35.2' 'not assigned.unknown' 'niben101scf00974_2543-8079' '(at5g61040 : 222.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 444.0) & (original description: Putative PGSC0003DMG400024637, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00974_91479-93447' ' no hits & (original description: Putative orf125a, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00974_93448-95454' ' no hits & (original description: Putative orf122, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00975_284461-286712' ' no hits & (original description: Putative PGSC0003DMG400004053, Description = CCAAT displacement family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00980_104590-108426' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00980_471185-493441' '(at3g10250 : 313.0) Plant protein 1589 of unknown function; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476); BEST Arabidopsis thaliana protein match is: Plant protein 1589 of unknown function (TAIR:AT5G04090.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|88257 : 96.5) no description available & (reliability: 626.0) & (original description: Putative F383_00486, Description = Histidine--tRNA ligase, PFAM = PF09713)' T '35.2' 'not assigned.unknown' 'niben101scf00980_514436-517114' '(at1g05970 : 175.0) RNA-binding (RRM/RBD/RNP motifs) family protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative BnaC05g04090D, Description = BnaC05g04090D protein, PFAM = PF00076)' T '35.2' 'not assigned.unknown' 'niben101scf00980_732936-736426' '(gnl|cdd|66792 : 238.0) no description available & (at3g50130 : 152.0) Plant protein of unknown function (DUF247); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: leaf apex, root, flower, carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50140.1); Has 12220 Blast hits to 6577 proteins in 475 species: Archae - 26; Bacteria - 903; Metazoa - 4175; Fungi - 967; Plants - 4043; Viruses - 563; Other Eukaryotes - 1543 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative PGSC0003DMG400008157, Description = DUF247 domain protein, PFAM = PF03140)' T '35.2' 'not assigned.unknown' 'niben101scf00981_15117-17482' ' no hits & (original description: Putative , Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf00981_335885-349139' '(at2g31490 : 112.0) unknown protein; Has 55 Blast hits to 55 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative At2g31490, Description = AT2G31490 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00983_299543-301902' ' no hits & (original description: Putative PGSC0003DMG400013784, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00983_499518-664933' '(at1g55340 : 152.0) Protein of unknown function (DUF1639); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1639 (InterPro:IPR012438); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1639) (TAIR:AT3G03880.1); Has 250 Blast hits to 247 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 250; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative F383_01731, Description = Aspartyl/glutamyl-tRNA (Asn/Gln) amidotransferase subunit B, PFAM = PF07797)' T '35.2' 'not assigned.unknown' 'niben101scf00984_1005844-1007461' ' (original description: Putative PGSC0003DMG400041999, Description = Epsin N-terminal domain-containing protein / clathrin assembly protein-related, putative, PFAM = PF07651)' T '35.2' 'not assigned.unknown' 'niben101scf00984_1007462-1008950' ' no hits & (original description: Putative PGSC0003DMG400041999, Description = Putative clathrin assembly protein, PFAM = PF07651)' T '35.2' 'not assigned.unknown' 'niben101scf00985_630661-634018' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00986_71367-75957' ' no hits & (original description: Putative , Description = , PFAM = PF00560;PF00560;PF00560)' T '35.2' 'not assigned.unknown' 'niben101scf00986_73717-87086' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00987_621294-624055' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00987_684021-686398' ' no hits & (original description: Putative , Description = , PFAM = PF05938)' T '35.2' 'not assigned.unknown' 'niben101scf00988_217974-240769' '(at2g28310 : 587.0) Protein of unknown function (DUF707); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G08040.2); Has 326 Blast hits to 325 proteins in 27 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 0; Plants - 305; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|68772 : 523.0) no description available & (reliability: 1174.0) & (original description: Putative At2g28310, Description = Putative uncharacterized protein At2g28310, PFAM = PF05212)' T '35.2' 'not assigned.unknown' 'niben101scf00990_273183-276887' ' no hits & (original description: Putative OXS3, Description = Oxidative stress 3, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00994_495518-502451' '(at5g55610 : 249.0) unknown protein; LOCATED IN: mitochondrion, plastid, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative At5g55610, Description = Putative uncharacterized protein At5g55610, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00994_568381-571245' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00995_70049-72534' '(at5g60680 : 131.0) Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT3G45210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68105 : 113.0) no description available & (reliability: 262.0) & (original description: Putative glysoja_007963, Description = Actin cytoskeleton-regulatory complex protein end3, putative isoform 7, PFAM = PF04520)' T '35.2' 'not assigned.unknown' 'niben101scf00995_446729-448902' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf00996_1575-4216' '(at2g42760 : 94.4) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); Has 170 Blast hits to 164 proteins in 34 species: Archae - 0; Bacteria - 1; Metazoa - 26; Fungi - 10; Plants - 107; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative At2g42760, Description = At2g42760, PFAM = PF07939)' T '35.2' 'not assigned.unknown' 'niben101scf00998_249273-251683' ' no hits & (original description: Putative BnaA05g02670D, Description = BnaA05g02670D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00998_319657-321965' ' no hits & (original description: Putative orf103c, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf00998_519192-522172' '(at3g57990 : 261.0) unknown protein; Has 1497 Blast hits to 1323 proteins in 52 species: Archae - 0; Bacteria - 4; Metazoa - 23; Fungi - 34; Plants - 61; Viruses - 0; Other Eukaryotes - 1375 (source: NCBI BLink). & (reliability: 522.0) & (original description: Putative PGSC0003DMG400023673, Description = Putative uncharacterized protein At3g57990, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01001_160484-169246' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01001_178702-187866' '(at2g26840 : 231.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43910.1). & (reliability: 462.0) & (original description: Putative PHYPADRAFT_181411, Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01001_374563-377499' '(at4g29070 : 265.0) Phospholipase A2 family protein; CONTAINS InterPro DOMAIN/s: Phospholipase A2 (InterPro:IPR016090); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|80306 : 95.4) no description available & (reliability: 530.0) & (original description: Putative , Description = Phospholipase A22, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01001_662462-670381' '(at3g26115 : 460.0) Pyridoxal-5'-phosphate-dependent enzyme family protein; FUNCTIONS IN: pyridoxal phosphate binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: D-cysteine desulfhydrase (TAIR:AT1G48420.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|32585 : 121.0) no description available & (reliability: 920.0) & (original description: Putative At3g26115, Description = D-cysteine desulfhydrase 2, mitochondrial, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01001_703938-715565' '(at4g31530 : 375.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: 3-beta-hydroxy-delta5-steroid dehydrogenase activity, binding, catalytic activity; INVOLVED IN: steroid biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-beta hydroxysteroid dehydrogenase/isomerase (InterPro:IPR002225), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G37660.1). & (gnl|cdd|36417 : 179.0) no description available & (reliability: 750.0) & (original description: Putative Cyan7822_5694, Description = NmrA family protein, PFAM = PF13460)' T '35.2' 'not assigned.unknown' 'niben101scf01002_676154-1239378' ' no hits & (original description: Putative glysoja_048993, Description = Copia protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01005_26483-29229' ' no hits & (original description: Putative MTR_3g026230, Description = Leguminosin group485 secreted peptide, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01005_105620-108840' '(at1g58120 : 191.0) BEST Arabidopsis thaliana protein match is: methyltransferases (TAIR:AT5G01710.1); Has 93 Blast hits to 93 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative MTR_4g093860, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01005_107012-109119' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01005_157735-160006' '(at5g50011 : 84.0) Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF37 represents a conserved upstream opening reading frame relative to major ORF AT5G50010.1; conserved peptide upstream open reading frame 37 (CPuORF37); BEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 43 (TAIR:AT5G09461.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01005_419351-431480' ' no hits & (original description: Putative PGSC0003DMG400012536, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01005_419357-431333' ' no hits & (original description: Putative PGSC0003DMG400012536, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01006_644240-646560' ' no hits & (original description: Putative orf107, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01008_351187-355584' ' no hits & (original description: Putative At1g28395, Description = At1g28395, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01008_367353-371099' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01008_441637-444855' ' no hits & (original description: Putative NbARP, Description = ROX1 homologue, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01009_59784-63079' '(at2g39370 : 117.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37380.1); Has 184 Blast hits to 178 proteins in 53 species: Archae - 0; Bacteria - 58; Metazoa - 9; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative MAKR3, Description = Probable membrane-associated kinase regulator 3, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01009_115395-126136' '(at3g09560 : 775.0) Lipin family protein; FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: cellular response to phosphate starvation, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: LNS2, Lipin/Ned1/Smp2 (InterPro:IPR013209), Lipin, N-terminal conserved region (InterPro:IPR007651); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphohydrolase 2 (TAIR:AT5G42870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37327 : 551.0) no description available & (gnl|cdd|34687 : 234.0) no description available & (reliability: 1550.0) & (original description: Putative LPIN2, Description = LPIN2, PFAM = PF08235;PF04571;PF16876)' T '35.2' 'not assigned.unknown' 'niben101scf01009_173567-177894' '(at5g18520 : 582.0) Lung seven transmembrane receptor family protein; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT3G09570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37780 : 558.0) no description available & (gnl|cdd|87161 : 148.0) no description available & (reliability: 1164.0) & (original description: Putative tmr1, Description = Putative transmembrane receptor, PFAM = PF06814)' T '35.2' 'not assigned.unknown' 'niben101scf01009_181690-200176' '(at5g02740 : 155.0) Ribosomal protein S24e family protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative PGSC0003DMG400023935, Description = At5g02740, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01009_281301-289228' '(at3g53490 : 187.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G02720.1); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative Sb01g038930, Description = Putative uncharacterized protein Sb01g038930, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01012_128098-130352' ' no hits & (original description: Putative PGSC0003DMG400004874, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01012_349565-352850' ' no hits & (original description: Putative PGSC0003DMG400024205, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01014_1029113-1031457' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01017_199086-203345' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01017_509065-511643' '(at5g16250 : 159.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative BnaA10g18070D, Description = BnaA10g18070D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01018_94718-156664' ' no hits & (original description: Putative psbT, Description = Photosystem II reaction center protein T, PFAM = PF01405)' T '35.2' 'not assigned.unknown' 'niben101scf01018_103893-106886' ' no hits & (original description: Putative PGSC0003DMG400039811, Description = Putative ovule protein, PFAM = PF03004;PF03004)' T '35.2' 'not assigned.unknown' 'niben101scf01022_425104-427487' '(atmg00300 : 115.0) hypothetical protein; Gag-Pol-related retrotransposon family protein. & (p10978|polx_tobac : 89.7) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco) & (reliability: 230.0) & (original description: Putative AtMg00300, Description = Uncharacterized mitochondrial protein AtMg00300, PFAM = PF13976)' T '35.2' 'not assigned.unknown' 'niben101scf01024_426575-429002' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01025_46419-52787' '(at2g16460 : 310.0) Protein of unknown function (DUF1640); FUNCTIONS IN: metal ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1640 (InterPro:IPR012439); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1640) (TAIR:AT3G51090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38366 : 213.0) no description available & (gnl|cdd|71238 : 210.0) no description available & (reliability: 620.0) & (original description: Putative At2g16460, Description = Expressed protein, PFAM = PF07798)' T '35.2' 'not assigned.unknown' 'niben101scf01025_360082-364913' '(at3g53490 : 202.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G02720.1); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative PGSC0003DMG400011053, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01025_395002-397424' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01025_411401-414702' '(at3g09570 : 607.0) Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT5G18520.1); Has 534 Blast hits to 530 proteins in 110 species: Archae - 0; Bacteria - 2; Metazoa - 259; Fungi - 16; Plants - 218; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|37780 : 561.0) no description available & (gnl|cdd|87161 : 149.0) no description available & (reliability: 1214.0) & (original description: Putative tmr1, Description = Lung seven transmembrane receptor family protein, PFAM = PF06814)' T '35.2' 'not assigned.unknown' 'niben101scf01025_1306191-1309318' '(at3g09310 : 142.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF37 (InterPro:IPR002696); Has 5781 Blast hits to 5781 proteins in 1903 species: Archae - 0; Bacteria - 3956; Metazoa - 2; Fungi - 0; Plants - 42; Viruses - 3; Other Eukaryotes - 1778 (source: NCBI BLink). & (gnl|cdd|31102 : 85.4) no description available & (reliability: 284.0) & (original description: Putative ALIPUT_02215, Description = Putative membrane protein insertion efficiency factor, PFAM = PF01809)' T '35.2' 'not assigned.unknown' 'niben101scf01026_131676-134371' ' no hits & (original description: Putative PGSC0003DMG400039811, Description = Putative ovule protein, PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben101scf01026_244014-247262' '(at5g04460 : 93.2) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Ring/U-Box superfamily protein (TAIR:AT2G27950.1). & (reliability: 186.4) & (original description: Putative PGSC0003DMG400011288, Description = Protein neuralized, PFAM = PF13920)' T '35.2' 'not assigned.unknown' 'niben101scf01026_449311-460642' '(at4g20150 : 127.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative At4g20150, Description = Putative uncharacterized protein At4g20150, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01027_182135-184851' '(at2g46150 : 90.9) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G64065.1); Has 262 Blast hits to 261 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 258; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative PGSC0003DMG400005783, Description = , PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'niben101scf01033_83241-85579' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01033_470418-472645' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01035_87127-91684' '(at1g49290 : 107.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13620.1); Has 99 Blast hits to 93 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative BnaC09g43470D, Description = BnaC09g43470D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01035_168169-170874' '(at5g13610 : 83.2) Protein of unknown function (DUF155); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF155 (InterPro:IPR003734); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF155) (TAIR:AT1G69380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative At5g13610, Description = AT5g13610/MSH12_7, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01035_547879-550187' ' no hits & (original description: Putative orf86, Description = ORF86, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01036_700989-707957' '(at4g27500 : 322.0) interacts with H+-ATPase, and regulates its activity; proton pump interactor 1 (PPI1); FUNCTIONS IN: protein binding; INVOLVED IN: regulation of proton transport; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36690.1); Has 56187 Blast hits to 35171 proteins in 2461 species: Archae - 533; Bacteria - 11472; Metazoa - 20772; Fungi - 6196; Plants - 2564; Viruses - 257; Other Eukaryotes - 14393 (source: NCBI BLink). & (reliability: 644.0) & (original description: Putative PPI1, Description = Proton pump-interactor 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01037_194617-197045' '(at2g32650 : 181.0) RmlC-like cupins superfamily protein; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Protein of unknown function DUF861, cupin-3 (InterPro:IPR008579), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 18 (TAIR:AT2G32180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative PTAC18, Description = Plastid transcriptionally active 18, PFAM = PF05899)' T '35.2' 'not assigned.unknown' 'niben101scf01037_292021-297468' '(at1g05060 : 276.0) unknown protein; Has 34 Blast hits to 34 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 552.0) & (original description: Putative MTR_5g085980, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01041_104310-108751' ' no hits & (original description: Putative , Description = , PFAM = PF14547)' T '35.2' 'not assigned.unknown' 'niben101scf01042_253275-260847' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01042_448597-451944' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01046_178362-180580' '(at4g09550 : 81.3) AtGCP3 interacting protein 1 (GIP1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3743 (InterPro:IPR022214); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3743) (TAIR:AT1G73790.1); Has 222 Blast hits to 222 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 54; Fungi - 64; Plants - 72; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative GIP1, Description = Mitotic-spindle organizing protein 1B, PFAM = PF12554)' T '35.2' 'not assigned.unknown' 'niben101scf01046_277178-286655' '(at3g48710 : 138.0) DEK domain-containing chromatin associated protein; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: DEK domain-containing chromatin associated protein (TAIR:AT5G63550.2); Has 53243 Blast hits to 30328 proteins in 1615 species: Archae - 67; Bacteria - 9231; Metazoa - 21090; Fungi - 5394; Plants - 2191; Viruses - 327; Other Eukaryotes - 14943 (source: NCBI BLink). & (gnl|cdd|37477 : 82.9) no description available & (reliability: 276.0) & (original description: Putative At3g48710, Description = Protein DEK, PFAM = PF08766)' T '35.2' 'not assigned.unknown' 'niben101scf01048_20773-24046' '(at2g16030 : 181.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G26730.1); Has 270 Blast hits to 270 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 250; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative At2g16030, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01051_293692-302361' '(at5g47480 : 686.0) RGPR-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RGPR-related (TAIR:AT5G47490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37124 : 314.0) no description available & (reliability: 1372.0) & (original description: Putative MAG5, Description = Protein transport protein Sec16B, PFAM = PF12931;PF12932)' T '35.2' 'not assigned.unknown' 'niben101scf01051_303171-376924' '(at3g12410 : 90.1) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G12460.1); Has 208 Blast hits to 196 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 197; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|39574 : 86.3) no description available & (reliability: 180.2) & (original description: Putative PGSC0003DMG400012475, Description = Werner Syndrome-like exonuclease, PFAM = PF01612)' T '35.2' 'not assigned.unknown' 'niben101scf01051_729461-732366' '(at1g62730 : 407.0) Terpenoid synthases superfamily protein; FUNCTIONS IN: transferase activity; INVOLVED IN: biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Terpenoid synthase (InterPro:IPR008949), Squalene/phytoene synthase (InterPro:IPR002060); Has 1013 Blast hits to 1013 proteins in 466 species: Archae - 0; Bacteria - 638; Metazoa - 104; Fungi - 106; Plants - 45; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|39612 : 318.0) no description available & (gnl|cdd|31750 : 100.0) no description available & (reliability: 814.0) & (original description: Putative At1g62730, Description = At1g62730, PFAM = PF00494)' T '35.2' 'not assigned.unknown' 'niben101scf01051_957419-960487' '(gnl|cdd|70732 : 251.0) no description available & (at2g45360 : 217.0) Protein of unknown function (DUF1442); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1442 (InterPro:IPR009902); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1442) (TAIR:AT3G60780.1); Has 113 Blast hits to 112 proteins in 16 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 434.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF07279)' T '35.2' 'not assigned.unknown' 'niben101scf01052_127613-130156' ' no hits & (original description: Putative PGSC0003DMG400028755, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01052_278696-282096' ' no hits & (original description: Putative PGSC0003DMG400028755, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01052_761950-765349' ' no hits & (original description: Putative PGSC0003DMG400028754, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01055_145525-148055' ' no hits & (original description: Putative , Description = Putative transcription initiation factor TFIID subunit 11-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01055_260027-273805' '(at3g26990 : 402.0) ENTH/VHS family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT5G65180.1); Has 1003 Blast hits to 995 proteins in 197 species: Archae - 0; Bacteria - 21; Metazoa - 515; Fungi - 219; Plants - 159; Viruses - 1; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|37880 : 151.0) no description available & (gnl|cdd|47880 : 127.0) no description available & (reliability: 804.0) & (original description: Putative BnaA09g01820D, Description = BnaA09g01820D protein, PFAM = PF04818)' T '35.2' 'not assigned.unknown' 'niben101scf01055_267028-269435' '(at3g26990 : 85.9) ENTH/VHS family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT5G65180.1); Has 1003 Blast hits to 995 proteins in 197 species: Archae - 0; Bacteria - 21; Metazoa - 515; Fungi - 219; Plants - 159; Viruses - 1; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative , Description = ENTH/VHS family protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01056_260007-267386' '(at4g32900 : 189.0) Peptidyl-tRNA hydrolase II (PTH2) family protein; FUNCTIONS IN: aminoacyl-tRNA hydrolase activity; INVOLVED IN: translation; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-tRNA hydrolase, PTH2 (InterPro:IPR002833); BEST Arabidopsis thaliana protein match is: Peptidyl-tRNA hydrolase II (PTH2) family protein (TAIR:AT5G16870.1); Has 933 Blast hits to 933 proteins in 345 species: Archae - 258; Bacteria - 52; Metazoa - 200; Fungi - 129; Plants - 88; Viruses - 8; Other Eukaryotes - 198 (source: NCBI BLink). & (gnl|cdd|38492 : 159.0) no description available & (gnl|cdd|48405 : 145.0) no description available & (reliability: 378.0) & (original description: Putative ptrh2, Description = Peptidyl-tRNA hydrolase 2, PFAM = PF01981)' T '35.2' 'not assigned.unknown' 'niben101scf01056_359779-379789' '(at4g32910 : 937.0) CONTAINS InterPro DOMAIN/s: Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro:IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87313 : 441.0) no description available & (gnl|cdd|37482 : 276.0) no description available & (reliability: 1874.0) & (original description: Putative NUP85, Description = Nuclear pore complex protein NUP85, PFAM = PF07575)' T '35.2' 'not assigned.unknown' 'niben101scf01060_140308-143994' ' no hits & (original description: Putative Sb08g020705, Description = Retrotransposon protein, putative, Ty1-copia subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01061_937071-939570' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf01062_276254-294805' ' no hits & (original description: Putative PGSC0003DMG400040189, Description = C2H2 type zf-zinc-finger protein, PFAM = PF12874;PF12874)' T '35.2' 'not assigned.unknown' 'niben101scf01062_291990-294781' ' no hits & (original description: Putative PGSC0003DMG400037110, Description = Putative uncharacterized protein Sb10g025790, PFAM = PF12874;PF12874)' T '35.2' 'not assigned.unknown' 'niben101scf01062_299520-304003' ' no hits & (original description: Putative PGSC0003DMG400011142, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01062_518852-522942' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01063_13672-16268' '(at3g02910 : 218.0) AIG2-like (avirulence induced gene) family protein; CONTAINS InterPro DOMAIN/s: Butirosin biosynthesis, BtrG-like (InterPro:IPR013024), AIG2-like (InterPro:IPR009288); BEST Arabidopsis thaliana protein match is: AIG2-like (avirulence induced gene) family protein (TAIR:AT5G46720.1); Has 320 Blast hits to 319 proteins in 102 species: Archae - 4; Bacteria - 64; Metazoa - 146; Fungi - 0; Plants - 79; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|39651 : 166.0) no description available & (reliability: 436.0) & (original description: Putative At3g02910, Description = Putative gamma-glutamylcyclotransferase At3g02910, PFAM = PF06094)' T '35.2' 'not assigned.unknown' 'niben101scf01063_117802-120676' ' no hits & (original description: Putative , Description = , PFAM = PF14111)' T '35.2' 'not assigned.unknown' 'niben101scf01063_196898-206549' '(at1g65020 : 357.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NERD (InterPro:IPR011528); Has 69 Blast hits to 69 proteins in 27 species: Archae - 0; Bacteria - 18; Metazoa - 8; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 714.0) & (original description: Putative At1g65020, Description = At1g65020, PFAM = PF08378)' T '35.2' 'not assigned.unknown' 'niben101scf01063_466913-469632' '(at5g16920 : 130.0) Fasciclin-like arabinogalactan family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sepal, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: Fasciclin-like arabinogalactan family protein (TAIR:AT5G26730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative PGSC0003DMG400027034, Description = At5g16920, PFAM = PF02469)' T '35.2' 'not assigned.unknown' 'niben101scf01063_861663-868981' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01063_1055501-1069923' '(at3g18440 : 594.0) Belongs to the aluminum-activated malate transporter family. Encodes a vacuolar malate channel. Expressed in all parts of plants. Almost exclusively expressed in mesophyll cells of leaves.; aluminum-activated malate transporter 9 (ALMT9); CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G18420.1); Has 814 Blast hits to 808 proteins in 259 species: Archae - 0; Bacteria - 440; Metazoa - 0; Fungi - 20; Plants - 338; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|39909 : 471.0) no description available & (gnl|cdd|85194 : 167.0) no description available & (reliability: 1188.0) & (original description: Putative ALMT9, Description = Aluminum-activated malate transporter 9, PFAM = PF11744)' T '35.2' 'not assigned.unknown' 'niben101scf01063_1100125-1106465' '(at4g10430 : 431.0) TMPIT-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: TMPIT-like (InterPro:IPR012926); BEST Arabidopsis thaliana protein match is: TMPIT-like protein (TAIR:AT1G33230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39955 : 145.0) no description available & (gnl|cdd|87386 : 128.0) no description available & (reliability: 862.0) & (original description: Putative TMPIT1, Description = TMPIT1, PFAM = PF07851)' T '35.2' 'not assigned.unknown' 'niben101scf01063_1168639-1174340' '(at3g49590 : 305.0) Autophagy-related protein 13; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 13 (InterPro:IPR018731); BEST Arabidopsis thaliana protein match is: Autophagy-related protein 13 (TAIR:AT3G18770.1). & (gnl|cdd|39773 : 237.0) no description available & (reliability: 610.0) & (original description: Putative ATG13A, Description = Autophagy-related protein 13a, PFAM = PF10033)' T '35.2' 'not assigned.unknown' 'niben101scf01064_127883-130422' '(at1g29195 : 105.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 180 Blast hits to 180 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative F28N24.12, Description = At1g29190/F28N24_12, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf01064_567773-571464' '(at4g18540 : 580.0) unknown protein; Has 209 Blast hits to 205 proteins in 54 species: Archae - 0; Bacteria - 17; Metazoa - 2; Fungi - 150; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1160.0) & (original description: Putative BnaAnng30480D, Description = BnaAnng30480D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01065_203336-220004' '(at5g11030 : 401.0) alf4-1 prevents initiation of lateral roots. Cannot be rescued by IAA. Protein belongs to a plant-specific gene family and is localized to the nucleus.; ABERRANT LATERAL ROOT FORMATION 4 (ALF4); INVOLVED IN: lateral root morphogenesis; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, YAP/Alf4/glomulin (InterPro:IPR013877); Has 14 Blast hits to 14 proteins in 8 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 802.0) & (original description: Putative ALF4, Description = Aberrant root formation protein 4, PFAM = PF08568;PF08568)' T '35.2' 'not assigned.unknown' 'niben101scf01065_247925-253449' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01066_557279-563497' ' no hits & (original description: Putative PGSC0003DMG400004596, Description = Putative uncharacterized protein Sb09g002950, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01070_442944-446154' ' no hits & (original description: Putative EXT3, Description = Extensin, PFAM = PF04554;PF04554)' T '35.2' 'not assigned.unknown' 'niben101scf01070_490202-495987' ' no hits & (original description: Putative StHRGP, Description = Hydroxyproline-rich glycoprotein, PFAM = PF04554;PF04554;PF04554;PF04554;PF04554;PF04554)' T '35.2' 'not assigned.unknown' 'niben101scf01072_100054-105832' '(at4g17070 : 437.0) peptidyl-prolyl cis-trans isomerases; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: response to oxidative stress; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); Has 214 Blast hits to 208 proteins in 48 species: Archae - 0; Bacteria - 43; Metazoa - 9; Fungi - 0; Plants - 153; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 874.0) & (original description: Putative At4g17070, Description = AT4g17070/dl4565c, PFAM = PF00160)' T '35.2' 'not assigned.unknown' 'niben101scf01073_253583-260877' '(at1g24350 : 194.0) Acid phosphatase/vanadium-dependent haloperoxidase-related protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: Acid phosphatase/vanadium-dependent haloperoxidase-related protein (TAIR:AT1G67600.1). & (gnl|cdd|32146 : 140.0) no description available & (reliability: 388.0) & (original description: Putative tll0019, Description = Tll0019 protein, PFAM = PF02681)' T '35.2' 'not assigned.unknown' 'niben101scf01075_129268-131593' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01075_157626-160825' ' no hits & (original description: Putative PGSC0003DMG400005631, Description = AP2 domain transcription factor-like protein, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'niben101scf01075_309649-312289' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01076_521339-525083' '(at4g01037 : 509.0) what's this factor? (WTF1); CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant (InterPro:IPR021099); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein (TAIR:AT5G62990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1018.0) & (original description: Putative Os05g0571100, Description = Os05g0571100 protein, PFAM = PF11955)' T '35.2' 'not assigned.unknown' 'niben101scf01078_9419-40049' '(at4g24680 : 233.0) Encodes MOS1 (MODIFIER OF snc1). MOS1 contains a BAT2 domain that is conserved in plants and animals. MOS1 regulates the expression of SNC1, a TIR-NB-LRR-type of R protein.; MODIFIER OF snc1 (MOS1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of gene expression, epigenetic; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; Has 5806 Blast hits to 4291 proteins in 546 species: Archae - 8; Bacteria - 946; Metazoa - 2312; Fungi - 705; Plants - 202; Viruses - 15; Other Eukaryotes - 1618 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative MOS1, Description = BnaA01g14040D protein, PFAM = PF07001)' T '35.2' 'not assigned.unknown' 'niben101scf01082_208640-212764' '(at4g37445 : 130.0) BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT1G64850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative BnaC01g01460D, Description = BnaC01g01460D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01084_293682-296850' ' no hits & (original description: Putative sar, Description = Putative SAR8.2a-like protein, PFAM = PF03058)' T '35.2' 'not assigned.unknown' 'niben101scf01084_508446-511679' ' no hits & (original description: Putative GRP1, Description = Glycine-rich protein, PFAM = PF07172)' T '35.2' 'not assigned.unknown' 'niben101scf01084_540701-544947' ' no hits & (original description: Putative GRP, Description = Glycine-rich protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01084_731614-734593' ' no hits & (original description: Putative GRP, Description = Glycine-rich protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01086_27265-31803' ' no hits & (original description: Putative PGSC0003DMG400041208, Description = , PFAM = PF09331)' T '35.2' 'not assigned.unknown' 'niben101scf01086_95700-100003' ' (original description: Putative grip22, Description = Ripening related protein family, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01089_178222-187412' '(at3g22290 : 569.0) Endoplasmic reticulum vesicle transporter protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1692 (InterPro:IPR012936); BEST Arabidopsis thaliana protein match is: Endoplasmic reticulum vesicle transporter protein (TAIR:AT1G22200.1); Has 1158 Blast hits to 1071 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 384; Fungi - 263; Plants - 270; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink). & (gnl|cdd|37878 : 316.0) no description available & (gnl|cdd|87414 : 240.0) no description available & (reliability: 1138.0) & (original description: Putative At3g22280, Description = Endoplasmic reticulum vesicle transporter protein, PFAM = PF07970;PF13850)' T '35.2' 'not assigned.unknown' 'niben101scf01090_36988-41404' ' (original description: Putative ERF098, Description = Ethylene-responsive transcription factor ERF098, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'niben101scf01090_630909-639246' '(at2g31140 : 273.0) Peptidase S24/S26A/S26B/S26C family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (InterPro:IPR011056), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927); BEST Arabidopsis thaliana protein match is: Peptidase S24/S26A/S26B/S26C family protein (TAIR:AT1G06200.1); Has 227 Blast hits to 227 proteins in 70 species: Archae - 0; Bacteria - 14; Metazoa - 22; Fungi - 48; Plants - 131; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|36781 : 130.0) no description available & (reliability: 546.0) & (original description: Putative BnaA10g04140D, Description = BnaA10g04140D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01091_45423-48383' '(at3g55250 : 318.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 46 Blast hits to 46 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative Sb01g008440, Description = Putative uncharacterized protein Sb01g008440, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01094_63465-66827' '(at5g46060 : 202.0) Protein of unknown function, DUF599; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF599 (InterPro:IPR006747); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF599 (TAIR:AT5G24600.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68233 : 163.0) no description available & (reliability: 404.0) & (original description: Putative Sb07g019180, Description = Putative uncharacterized protein Sb07g019180, PFAM = PF04654)' T '35.2' 'not assigned.unknown' 'niben101scf01094_65222-68908' '(at5g46060 : 215.0) Protein of unknown function, DUF599; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF599 (InterPro:IPR006747); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF599 (TAIR:AT5G24600.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68233 : 159.0) no description available & (reliability: 430.0) & (original description: Putative PGSC0003DMG400031770, Description = Os09g0327000 protein, PFAM = PF04654)' T '35.2' 'not assigned.unknown' 'niben101scf01094_177872-182567' '(q8lhp0|elof1_orysa : 131.0) Transcription elongation factor 1 homolog - Oryza sativa (Rice) & (at5g46030 : 114.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF701, zinc-binding putative (InterPro:IPR007808); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38424 : 108.0) no description available & (gnl|cdd|34497 : 81.2) no description available & (reliability: 228.0) & (original description: Putative Os07g0631100, Description = Transcription elongation factor 1 homolog, PFAM = PF05129)' T '35.2' 'not assigned.unknown' 'niben101scf01094_211723-217546' '(at5g46020 : 101.0) CONTAINS InterPro DOMAIN/s: Casein kinase substrate, phosphoprotein PP28 (InterPro:IPR019380); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative hasp, Description = HASP protein-like protein, PFAM = PF10252)' T '35.2' 'not assigned.unknown' 'niben101scf01100_165207-179871' '(at4g27630 : 632.0) Encodes a GPCR-type G protein receptor with nine predicted transmembrane domains. The protein binds abscisic acid (ABA) and is predicted to function as an ABA receptor. It has GTP-binding and GTPase activity and binds to ABA more effectively in the presence of GDP. GTG2 binds to GPA1, the alpha subunit of the heterotrimeric G protein. GPA1 (in its GTP-bound state) affects the GTP binding and GTPase activity of GTG2 and may act to down-regulate GTG2 binding to ABA. GTG2 is widely expressed throughout the plant and appears to be involved in the regulation of several ABA-dependent responses including seed germination, plant development, and promotion of stomatal closure. GTG2 transcript levels do not appear to change in response to ABA or abiotic stresses.; GPCR-type G protein 2 (GTG2); CONTAINS InterPro DOMAIN/s: GPCR 89-related (InterPro:IPR015672), Protein of unknown function DUF3735 (InterPro:IPR022535); BEST Arabidopsis thaliana protein match is: GPCR-type G protein 1 (TAIR:AT1G64990.2). & (gnl|cdd|37628 : 625.0) no description available & (reliability: 1264.0) & (original description: Putative GTG1, Description = GPCR-type G protein 1, PFAM = PF12537;PF12430)' T '35.2' 'not assigned.unknown' 'niben101scf01100_407509-413272' '(at2g04360 : 308.0) unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 616.0) & (original description: Putative BnaCnng00580D, Description = BnaCnng00580D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01100_704880-725940' '(at3g07660 : 471.0) Kinase-related protein of unknown function (DUF1296); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1296 (InterPro:IPR009719); BEST Arabidopsis thaliana protein match is: Kinase-related protein of unknown function (DUF1296) (TAIR:AT3G13990.1); Has 3086 Blast hits to 1914 proteins in 327 species: Archae - 2; Bacteria - 372; Metazoa - 1089; Fungi - 466; Plants - 245; Viruses - 13; Other Eukaryotes - 899 (source: NCBI BLink). & (gnl|cdd|70439 : 109.0) no description available & (reliability: 942.0) & (original description: Putative GIP1, Description = F20N2.19, PFAM = PF06972)' T '35.2' 'not assigned.unknown' 'niben101scf01100_732913-736658' '(at2g04280 : 825.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12700.1); Has 130 Blast hits to 130 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 1650.0) & (original description: Putative BnaCnng00550D, Description = BnaCnng00550D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01100_737668-739970' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01101_549527-553977' '(at2g40060 : 147.0) Clathrin light chain protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin light chain (InterPro:IPR000996); BEST Arabidopsis thaliana protein match is: Clathrin light chain protein (TAIR:AT3G51890.1); Has 548 Blast hits to 536 proteins in 149 species: Archae - 2; Bacteria - 80; Metazoa - 210; Fungi - 41; Plants - 105; Viruses - 2; Other Eukaryotes - 108 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative CLC1, Description = Clathrin light chain protein, PFAM = PF01086)' T '35.2' 'not assigned.unknown' 'niben101scf01102_311738-323413' ' no hits & (original description: Putative , Description = , PFAM = PF13369)' T '35.2' 'not assigned.unknown' 'niben101scf01102_456049-459023' '(at1g01180 : 355.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: lipid biosynthetic process; EXPRESSED IN: sperm cell, hypocotyl; CONTAINS InterPro DOMAIN/s: Rhamnosyl O-methyltransferase/Cephalosporin hydroxylase (InterPro:IPR007072); Has 274 Blast hits to 274 proteins in 51 species: Archae - 0; Bacteria - 75; Metazoa - 2; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (reliability: 710.0) & (original description: Putative At1g01180, Description = S-adenosyl-L-methionine-dependent methyltransferase domain-containing protein, PFAM = PF13578)' T '35.2' 'not assigned.unknown' 'niben101scf01107_29175-39607' '(at3g19895 : 611.0) RING/U-box superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G12940.1); Has 120 Blast hits to 120 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 108; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 1222.0) & (original description: Putative LOC100278371, Description = Putative uncharacterized protein Sb01g003650, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01107_45487-48274' ' no hits & (original description: Putative , Description = , PFAM = PF08387)' T '35.2' 'not assigned.unknown' 'niben101scf01108_128749-131824' ' no hits & (original description: Putative PGSC0003DMG400001033, Description = , PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'niben101scf01109_319525-321824' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01109_323577-325873' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01109_339763-342053' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01111_505-36505' '(at1g12530 : 97.1) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56420.1); Has 54 Blast hits to 53 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative F383_13901, Description = Adenosine monophosphate-protein transferase and cysteine protease ibpA, PFAM = PF05205)' T '35.2' 'not assigned.unknown' 'niben101scf01115_296121-299892' ' no hits & (original description: Putative , Description = , PFAM = PF02721)' T '35.2' 'not assigned.unknown' 'niben101scf01119_666364-668546' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01124_977618-983204' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01124_1010669-1600695' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf01125_285401-288132' '(at5g24840 : 404.0) tRNA (guanine-N-7) methyltransferase; FUNCTIONS IN: tRNA (guanine-N7-)-methyltransferase activity; INVOLVED IN: acetate biosynthetic process from carbon monoxide, methanol oxidation, tRNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA (guanine-N-7) methyltransferase (InterPro:IPR003358); BEST Arabidopsis thaliana protein match is: tRNA (guanine-N-7) methyltransferase (TAIR:AT5G17660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38325 : 343.0) no description available & (gnl|cdd|66109 : 171.0) no description available & (reliability: 808.0) & (original description: Putative At5g24840, Description = tRNA (guanine-N(7)-)-methyltransferase, PFAM = PF02390)' T '35.2' 'not assigned.unknown' 'niben101scf01126_15806-21336' '(at5g26910 : 254.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G58650.1). & (reliability: 508.0) & (original description: Putative F383_01802, Description = E3 SUMO-protein ligase NSE2, PFAM = PF14383;PF14309)' T '35.2' 'not assigned.unknown' 'niben101scf01126_101065-105032' '(at5g49320 : 152.0) Protein of unknown function (DUF1218); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative BnaA02g30710D, Description = BnaA02g30710D protein, PFAM = PF06749)' T '35.2' 'not assigned.unknown' 'niben101scf01128_13967-17264' '(gnl|cdd|69095 : 164.0) no description available & (at1g61260 : 162.0) Protein of unknown function (DUF761); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF761) (TAIR:AT1G11220.1); Has 110 Blast hits to 108 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 108; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative CFE1, Description = Cotton fiber expressed protein, PFAM = PF14364;PF05553)' T '35.2' 'not assigned.unknown' 'niben101scf01131_71211-77574' '(at2g23093 : 472.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G49310.1); Has 365 Blast hits to 362 proteins in 119 species: Archae - 0; Bacteria - 86; Metazoa - 79; Fungi - 33; Plants - 127; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|39533 : 105.0) no description available & (gnl|cdd|86904 : 82.8) no description available & (reliability: 944.0) & (original description: Putative BnaC08g34640D, Description = BnaC08g34640D protein, PFAM = PF05631)' T '35.2' 'not assigned.unknown' 'niben101scf01131_71502-74375' '(at2g23093 : 187.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G49310.1); Has 365 Blast hits to 362 proteins in 119 species: Archae - 0; Bacteria - 86; Metazoa - 79; Fungi - 33; Plants - 127; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative At2g23093, Description = Major facilitator protein, PFAM = PF05631)' T '35.2' 'not assigned.unknown' 'niben101scf01135_37745-40575' ' no hits & (original description: Putative PGSC0003DMG400007124, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01135_207491-210137' ' no hits & (original description: Putative PSK3, Description = Putative phytosulfokine peptide, PFAM = PF06404)' T '35.2' 'not assigned.unknown' 'niben101scf01142_324797-327380' '(at2g11890 : 192.0) adenylate cyclase; adenylate cyclases; FUNCTIONS IN: adenylate cyclase activity; INVOLVED IN: cAMP biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate cyclase (InterPro:IPR008172); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative TTM3, Description = Triphosphate tunel metalloenzyme 3, PFAM = PF01928)' T '35.2' 'not assigned.unknown' 'niben101scf01142_327381-330086' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01142_417425-420024' '(at1g80520 : 135.0) Sterile alpha motif (SAM) domain-containing protein; CONTAINS InterPro DOMAIN/s: Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 2 (InterPro:IPR011510); BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G15760.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative , Description = , PFAM = PF07647)' T '35.2' 'not assigned.unknown' 'niben101scf01142_443826-447148' '(at3g02645 : 479.0) Plant protein of unknown function (DUF247); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50150.1). & (gnl|cdd|66792 : 155.0) no description available & (reliability: 958.0) & (original description: Putative At3g02645, Description = Putative UPF0481 protein At3g02645, PFAM = PF03140)' T '35.2' 'not assigned.unknown' 'niben101scf01142_446694-449266' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01143_145476-148587' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01143_977162-984824' '(at1g74160 : 524.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G18620.1); Has 3407 Blast hits to 2217 proteins in 314 species: Archae - 0; Bacteria - 264; Metazoa - 1296; Fungi - 318; Plants - 346; Viruses - 34; Other Eukaryotes - 1149 (source: NCBI BLink). & (reliability: 1048.0) & (original description: Putative At1g74160, Description = Putative uncharacterized protein At1g74160, PFAM = PF14309;PF14383)' T '35.2' 'not assigned.unknown' 'niben101scf01144_190843-193430' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01145_206140-208262' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01146_854007-868174' ' no hits & (original description: Putative SDM1_53t00017, Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf01146_854022-867943' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf01147_290917-301568' '(at1g52220 : 114.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: photosystem I P subunit (TAIR:AT2G46820.2); Has 251 Blast hits to 251 proteins in 43 species: Archae - 0; Bacteria - 66; Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative CURT1C, Description = Protein CURVATURE THYLAKOID 1C, chloroplastic, PFAM = PF14159)' T '35.2' 'not assigned.unknown' 'niben101scf01147_631316-637667' '(at3g16200 : 665.0) unknown protein; Has 97 Blast hits to 97 proteins in 15 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 1330.0) & (original description: Putative BnaA05g23490D, Description = BnaA05g23490D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01148_25837-30673' '(at5g12230 : 150.0) MED19A; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19480.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative MED19A, Description = Mediator of RNA polymerase II transcription subunit 19a, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01150_231869-234293' ' no hits & (original description: Putative , Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF00098)' T '35.2' 'not assigned.unknown' 'niben101scf01150_467638-491676' '(at1g76850 : 1264.0) Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.; exocyst complex component sec5 (SEC5A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen germination, pollen tube growth; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Exocyst complex component SEC5 (TAIR:AT1G21170.1); Has 532 Blast hits to 503 proteins in 167 species: Archae - 0; Bacteria - 2; Metazoa - 234; Fungi - 147; Plants - 83; Viruses - 4; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|37558 : 710.0) no description available & (reliability: 2528.0) & (original description: Putative SEC5A, Description = Exocyst complex component SEC5A, PFAM = PF15469)' T '35.2' 'not assigned.unknown' 'niben101scf01151_60089-63595' ' (original description: Putative LTP1, Description = Non-specific lipid-transfer protein 1, PFAM = PF14368)' T '35.2' 'not assigned.unknown' 'niben101scf01152_237442-240355' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01153_29919-37493' ' (original description: Putative RT, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf01154_588525-591935' ' no hits & (original description: Putative TCM_041964, Description = Embryo-specific protein 3, putative, PFAM = PF06232)' T '35.2' 'not assigned.unknown' 'niben101scf01154_1223006-1231639' '(at5g46850 : 169.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: endomembrane system, endoplasmic reticulum membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PIG-X/PBN1 (InterPro:IPR013233). & (reliability: 338.0) & (original description: Putative IDP34, Description = Phosphatidylinositol-glycan biosynthesis class X protein, PFAM = PF08320)' T '35.2' 'not assigned.unknown' 'niben101scf01154_1732089-1734997' ' (original description: Putative cht1, Description = Chitinase 1, putative, PFAM = PF00704)' T '35.2' 'not assigned.unknown' 'niben101scf01154_1912735-1915664' ' no hits & (original description: Putative Sb02g028710, Description = Putative uncharacterized protein Sb02g028710, PFAM = PF02602)' T '35.2' 'not assigned.unknown' 'niben101scf01155_601529-604012' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben101scf01157_12760-30903' ' no hits & (original description: Putative PGSC0003DMG400029321, Description = , PFAM = PF03087)' T '35.2' 'not assigned.unknown' 'niben101scf01157_13417-18364' ' no hits & (original description: Putative BnaC06g21950D, Description = BnaC06g21950D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01157_159642-164529' '(at1g76250 : 509.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 74 Blast hits to 74 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 1018.0) & (original description: Putative At1g76250, Description = T23E18.18, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01157_309701-314828' '(at1g63610 : 360.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 720.0) & (original description: Putative Sb04g038580, Description = Putative uncharacterized protein Sb04g038580, PFAM = PF05542;PF05542)' T '35.2' 'not assigned.unknown' 'niben101scf01158_183135-193818' '(at4g15730 : 213.0) CW-type Zinc Finger; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: CW-type Zinc Finger (TAIR:AT3G62900.1); Has 395 Blast hits to 319 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 141; Fungi - 0; Plants - 166; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative At3g62900, Description = Putative ovule protein, PFAM = PF07496)' T '35.2' 'not assigned.unknown' 'niben101scf01163_333591-391495' '(at3g03560 : 474.0) unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23490.1); Has 157 Blast hits to 146 proteins in 38 species: Archae - 3; Bacteria - 14; Metazoa - 8; Fungi - 0; Plants - 120; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 948.0) & (original description: Putative Sb10g027040, Description = Putative uncharacterized protein Sb10g027040, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01166_624698-629366' ' no hits & (original description: Putative PGSC0003DMG400000898, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01166_728124-737695' '(at3g19990 : 595.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 118 Blast hits to 118 proteins in 41 species: Archae - 0; Bacteria - 42; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 1190.0) & (original description: Putative PHYPADRAFT_164339, Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01166_1112605-1116065' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01167_210051-212834' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01167_341285-343668' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01170_237010-241785' '(at4g14600 : 183.0) Target SNARE coiled-coil domain protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: Target SNARE coiled-coil domain protein (TAIR:AT1G29060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative At1g29060, Description = Bet1-like protein At1g29060, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01171_246331-248813' ' no hits & (original description: Putative PGSC0003DMG400035476, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01171_898806-904858' '(at1g63060 : 88.2) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07330.1); Has 42 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative PGSC0003DMG400019112, Description = Ribosome biogenesis protein NEP1-like, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01172_1026379-1028976' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01175_177951-182522' ' no hits & (original description: Putative PGSC0003DMG400015363, Description = Rapid ALkalinization Factor, PFAM = PF05498)' T '35.2' 'not assigned.unknown' 'niben101scf01176_182054-184623' ' no hits & (original description: Putative , Description = , PFAM = PF00098)' T '35.2' 'not assigned.unknown' 'niben101scf01176_189306-191654' ' no hits & (original description: Putative MT4B, Description = Metallothionein-like protein 4B, PFAM = PF02068)' T '35.2' 'not assigned.unknown' 'niben101scf01177_599107-605302' '(at5g09995 : 212.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 424.0) & (original description: Putative BnaC09g46710D, Description = BnaC09g46710D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01177_605290-614733' '(at2g21990 : 284.0) Protein of unknown function, DUF617; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: sepal, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF617, plant (InterPro:IPR006460); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF617 (TAIR:AT4G39610.1); Has 257 Blast hits to 257 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68336 : 239.0) no description available & (reliability: 568.0) & (original description: Putative MIZ1, Description = BnaA06g33470D protein, PFAM = PF04759)' T '35.2' 'not assigned.unknown' 'niben101scf01178_99037-107286' '(at2g27950 : 357.0) Ring/U-Box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G04460.3); Has 608 Blast hits to 493 proteins in 135 species: Archae - 2; Bacteria - 207; Metazoa - 113; Fungi - 27; Plants - 119; Viruses - 0; Other Eukaryotes - 140 (source: NCBI BLink). & (reliability: 714.0) & (original description: Putative PGSC0003DMG400007157, Description = Protein neuralized, PFAM = PF13920)' T '35.2' 'not assigned.unknown' 'niben101scf01179_115066-128707' '(at4g20060 : 473.0) EMBRYO DEFECTIVE 1895 (EMB1895); FUNCTIONS IN: binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 205 Blast hits to 155 proteins in 64 species: Archae - 0; Bacteria - 0; Metazoa - 163; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|37199 : 270.0) no description available & (reliability: 946.0) & (original description: Putative PGSC0003DMG400003329, Description = CM0545.590.nc protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01180_485896-499913' '(at1g21370 : 451.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF218 (InterPro:IPR003848); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39733 : 306.0) no description available & (reliability: 902.0) & (original description: Putative BnaC05g16630D, Description = BnaC05g16630D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01180_809354-811392' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01180_810486-813463' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01180_811393-813424' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01181_228062-232329' '(at3g18050 : 312.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28100.1); Has 67 Blast hits to 66 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 624.0) & (original description: Putative At4g28100, Description = Uncharacterized GPI-anchored protein At4g28100, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01181_296781-301975' ' (original description: Putative pabf, Description = DNA-binding protein, PFAM = PF00538)' T '35.2' 'not assigned.unknown' 'niben101scf01181_348351-381927' '(at3g18240 : 247.0) Ribosomal protein S24/S35, mitochondrial; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Ribosomal protein S24/S35, mitochondrial (InterPro:IPR019349); BEST Arabidopsis thaliana protein match is: Ribosomal protein S24/S35, mitochondrial (TAIR:AT4G21460.1); Has 302 Blast hits to 286 proteins in 105 species: Archae - 0; Bacteria - 67; Metazoa - 57; Fungi - 33; Plants - 60; Viruses - 2; Other Eukaryotes - 83 (source: NCBI BLink). & (gnl|cdd|39136 : 123.0) no description available & (reliability: 494.0) & (original description: Putative At3g18240, Description = AT3G18240 protein, PFAM = PF10213)' T '35.2' 'not assigned.unknown' 'niben101scf01181_358532-382173' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01182_608081-611345' ' no hits & (original description: Putative PGSC0003DMG400026945, Description = CASP-like protein, PFAM = PF04535)' T '35.2' 'not assigned.unknown' 'niben101scf01182_620494-626503' ' (original description: Putative BVRB_5g113030, Description = CASP-like protein, PFAM = PF04535)' T '35.2' 'not assigned.unknown' 'niben101scf01182_678456-688737' '(at3g26890 : 306.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41110.1). & (gnl|cdd|37517 : 158.0) no description available & (reliability: 612.0) & (original description: Putative , Description = , PFAM = PF13889)' T '35.2' 'not assigned.unknown' 'niben101scf01184_1756024-1759629' ' (original description: Putative Cco1, Description = O-methyltransferase, putative, PFAM = PF00891;PF08100)' T '35.2' 'not assigned.unknown' 'niben101scf01185_188830-191194' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01185_330659-333162' '(at5g60680 : 133.0) Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT3G45210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68105 : 118.0) no description available & (reliability: 266.0) & (original description: Putative glysoja_007963, Description = Actin cytoskeleton-regulatory complex protein end3, putative isoform 7, PFAM = PF04520)' T '35.2' 'not assigned.unknown' 'niben101scf01187_143462-145770' ' no hits & (original description: Putative orf42, Description = Orf42, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01187_224142-228647' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01188_28451-31388' '(at1g34245 : 98.2) Encodes a secretory peptide EPF2 expressed in proliferating cells of the stomatal lineage, known as meristemoids, and in guard mother cells, the progenitors of stomata. Controls asymmetric cell divisions during stomatal development. EPF2 is related to EPF1, also involved in stomatal development.; EPIDERMAL PATTERNING FACTOR 2 (EPF2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: stomatal complex development, guard cell differentiation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71866.1); Has 42 Blast hits to 42 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative EPF1, Description = EPF-like protein 7, PFAM = PF17181)' T '35.2' 'not assigned.unknown' 'niben101scf01188_307674-313231' '(at1g34220 : 348.0) Regulator of Vps4 activity in the MVB pathway protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061); BEST Arabidopsis thaliana protein match is: Regulator of Vps4 activity in the MVB pathway protein (TAIR:AT4G35730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37238 : 209.0) no description available & (gnl|cdd|67036 : 172.0) no description available & (reliability: 696.0) & (original description: Putative BnaA08g06470D, Description = BnaA08g06470D protein, PFAM = PF03398)' T '35.2' 'not assigned.unknown' 'niben101scf01188_801866-810940' '(at1g79380 : 471.0) Ca(2)-dependent phospholipid-binding protein (Copine) family; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Copine (InterPro:IPR010734), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: RING domain ligase2 (TAIR:AT5G14420.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36541 : 308.0) no description available & (gnl|cdd|29232 : 271.0) no description available & (reliability: 942.0) & (original description: Putative Sb07g002700, Description = Putative uncharacterized protein Sb07g002700, PFAM = PF13920;PF07002)' T '35.2' 'not assigned.unknown' 'niben101scf01188_811588-815662' '(at2g43110 : 117.0) unknown protein; Has 212 Blast hits to 211 proteins in 96 species: Archae - 0; Bacteria - 6; Metazoa - 62; Fungi - 91; Plants - 31; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative , Description = DEAD-box helicase family protein, PFAM = PF14617)' T '35.2' 'not assigned.unknown' 'niben101scf01188_996684-1001155' ' no hits & (original description: Putative PGSC0003DMG400002456, Description = Cysteine-rich extensin-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01188_1193438-1198051' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01188_1206281-1211951' '(at3g60450 : 299.0) Phosphoglycerate mutase family protein; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), PRIB5 (InterPro:IPR012398); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G60440.1); Has 301 Blast hits to 297 proteins in 123 species: Archae - 0; Bacteria - 109; Metazoa - 16; Fungi - 49; Plants - 68; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|38938 : 174.0) no description available & (reliability: 598.0) & (original description: Putative At3g60440, Description = Phosphoglycerate mutase family protein, PFAM = PF00300;PF00300)' T '35.2' 'not assigned.unknown' 'niben101scf01189_183619-207324' '(at3g50780 : 609.0) BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G63850.1); Has 298 Blast hits to 298 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 287; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 1218.0) & (original description: Putative At3g50780, Description = BTB/POZ domain-containing protein At3g50780, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01189_396890-399351' '(at2g23690 : 152.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37240.1); Has 243 Blast hits to 243 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative , Description = , PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf01190_106548-115855' '(at2g21385 : 372.0) unknown protein. & (reliability: 744.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01190_315044-318931' '(at2g21350 : 131.0) RNA-binding CRS1 / YhbY (CRM) domain protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain protein (TAIR:AT4G39040.2); Has 1900 Blast hits to 1900 proteins in 975 species: Archae - 2; Bacteria - 1806; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|85815 : 81.0) no description available & (reliability: 262.0) & (original description: Putative At2g21350, Description = RNA-binding CRS1 / YhbY (CRM) domain protein, PFAM = PF01985)' T '35.2' 'not assigned.unknown' 'niben101scf01191_304527-310819' '(at5g27560 : 126.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1995 (InterPro:IPR018962); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative At5g27560, Description = DUF1995 domain protein, PFAM = PF09353)' T '35.2' 'not assigned.unknown' 'niben101scf01191_676378-678905' '(at4g35320 : 89.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01192_464798-467001' '(at1g52855 : 94.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15534.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01194_46173-48800' ' no hits & (original description: Putative BA19, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF13961;PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf01194_50271-62224' '(at4g24090 : 251.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 144 Blast hits to 142 proteins in 73 species: Archae - 3; Bacteria - 62; Metazoa - 7; Fungi - 13; Plants - 44; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 502.0) & (original description: Putative At4g24090, Description = At4g24090, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01194_88882-90718' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01198_525-6011' '(gnl|cdd|69644 : 226.0) no description available & (at5g10150 : 209.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF966 (InterPro:IPR010369), Uncharacterised conserved protein UCP031043 (InterPro:IPR021182); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF966) (TAIR:AT5G59790.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 418.0) & (original description: Putative , Description = Auxin-regulated protein, PFAM = PF06136;PF06136)' T '35.2' 'not assigned.unknown' 'niben101scf01198_265996-268517' '(at3g02910 : 164.0) AIG2-like (avirulence induced gene) family protein; CONTAINS InterPro DOMAIN/s: Butirosin biosynthesis, BtrG-like (InterPro:IPR013024), AIG2-like (InterPro:IPR009288); BEST Arabidopsis thaliana protein match is: AIG2-like (avirulence induced gene) family protein (TAIR:AT5G46720.1); Has 320 Blast hits to 319 proteins in 102 species: Archae - 4; Bacteria - 64; Metazoa - 146; Fungi - 0; Plants - 79; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|39651 : 157.0) no description available & (reliability: 328.0) & (original description: Putative At3g02910, Description = Os11g0139900 protein, PFAM = PF06094)' T '35.2' 'not assigned.unknown' 'niben101scf01200_786354-788698' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01203_42353-44936' '(at5g43050 : 184.0) Chloroplast localized YCF20-like gene involved in nonphotochemical quenching. Has overlapping functions with npq7; NONPHOTOCHEMICAL QUENCHING 6 (NPQ6); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF565 (InterPro:IPR007572); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative NPQ6, Description = At5g43050, PFAM = PF04483)' T '35.2' 'not assigned.unknown' 'niben101scf01203_106448-111353' '(at1g29200 : 658.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G62330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66790 : 417.0) no description available & (reliability: 1316.0) & (original description: Putative BnaA09g54120D, Description = BnaA09g54120D protein, PFAM = PF10250)' T '35.2' 'not assigned.unknown' 'niben101scf01204_92678-95064' ' no hits & (original description: Putative PGSC0003DMG400018845, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01208_79883-82203' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01208_180194-181361' ' no hits & (original description: Putative psbN, Description = Protein PsbN, PFAM = PF02468)' T '35.2' 'not assigned.unknown' 'niben101scf01208_347204-378218' '(at1g28760 : 344.0) Uncharacterized conserved protein (DUF2215); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2215 (InterPro:IPR019358); BEST Arabidopsis thaliana protein match is: Uncharacterized conserved protein (DUF2215) (TAIR:AT3G49840.1); Has 153 Blast hits to 153 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 67; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 688.0) & (original description: Putative At1g28760, Description = F1K23.6, PFAM = PF10225)' T '35.2' 'not assigned.unknown' 'niben101scf01209_137898-144211' '(at1g11320 : 349.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 46 Blast hits to 46 proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 698.0) & (original description: Putative T28P6.3, Description = Putative uncharacterized protein At1g11320, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01209_408915-419841' '(at4g33480 : 319.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3727 (InterPro:IPR022203); Has 348 Blast hits to 348 proteins in 78 species: Archae - 0; Bacteria - 101; Metazoa - 0; Fungi - 0; Plants - 183; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (reliability: 638.0) & (original description: Putative hda14, Description = , PFAM = PF12527)' T '35.2' 'not assigned.unknown' 'niben101scf01212_176013-186126' '(at5g66470 : 461.0) RNA binding;GTP binding; FUNCTIONS IN: RNA binding, GTP binding; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 2 (InterPro:IPR004044), K Homology, prokaryotic type (InterPro:IPR009019), Small GTP-binding protein (InterPro:IPR005225), GTP1/OBG (InterPro:IPR006073), GTP-binding protein Era (InterPro:IPR005662), GTP-binding protein, HSR1-related (InterPro:IPR002917), K homology-like, alpha/beta (InterPro:IPR015946); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT1G30960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80503 : 346.0) no description available & (gnl|cdd|36637 : 320.0) no description available & (reliability: 922.0) & (original description: Putative era, Description = GTPase Era, PFAM = PF01926;PF07650)' T '35.2' 'not assigned.unknown' 'niben101scf01213_108650-110952' ' no hits & (original description: Putative orf101b, Description = Orf123b, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01213_130469-134409' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01218_234305-238031' '(at4g32295 : 211.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24150.1); Has 34 Blast hits to 34 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative At3g24150, Description = Putative uncharacterized protein At3g24150, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01220_31116-36087' '(gnl|cdd|37778 : 182.0) no description available & (at3g07030 : 169.0) Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein (InterPro:IPR002775); BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein (TAIR:AT1G76010.1); Has 449 Blast hits to 441 proteins in 135 species: Archae - 3; Bacteria - 20; Metazoa - 178; Fungi - 24; Plants - 137; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (gnl|cdd|85767 : 81.0) no description available & (reliability: 338.0) & (original description: Putative umc1204, Description = DNA/RNA-binding protein Alba-like protein, PFAM = PF01918)' T '35.2' 'not assigned.unknown' 'niben101scf01220_271537-276757' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01220_462652-468512' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01226_92457-98584' '(at2g41640 : 543.0) Glycosyltransferase family 61 protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyltransferase AER61, uncharacterised (InterPro:IPR007657); BEST Arabidopsis thaliana protein match is: Glycosyltransferase family 61 protein (TAIR:AT3G57380.1). & (gnl|cdd|39896 : 379.0) no description available & (gnl|cdd|68160 : 281.0) no description available & (reliability: 1086.0) & (original description: Putative GT61A2, Description = Glycosyltransferase in CAZy family GT61, PFAM = PF04577)' T '35.2' 'not assigned.unknown' 'niben101scf01226_197820-200665' '(at2g41660 : 247.0) Essential for hydrotropism in roots. Mutant roots are defective in hydrotropism, and have slightly reduced phototropism and modified wavy growth response. Has normal gravitropism and root elongation.; mizu-kussei 1 (MIZ1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF617, plant (InterPro:IPR006460); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF617 (TAIR:AT3G25640.1); Has 258 Blast hits to 256 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 258; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68336 : 245.0) no description available & (reliability: 494.0) & (original description: Putative MIZ1, Description = BnaA06g33470D protein, PFAM = PF04759)' T '35.2' 'not assigned.unknown' 'niben101scf01228_110088-120218' ' no hits & (original description: Putative glysoja_022497, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01228_489393-492534' '(at1g29050 : 259.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 38 (TBL38); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 37 (TAIR:AT2G34070.1); Has 1347 Blast hits to 1329 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1344; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|72785 : 187.0) no description available & (reliability: 518.0) & (original description: Putative gal2, Description = Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein, PFAM = PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf01228_489503-496479' '(at1g29050 : 493.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 38 (TBL38); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 37 (TAIR:AT2G34070.1); Has 1347 Blast hits to 1329 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1344; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|72785 : 195.0) no description available & (reliability: 986.0) & (original description: Putative gal2, Description = Alpha galactosidase, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf01230_42597-46279' '(at1g70230 : 450.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 27 (TBL27); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 25 (TAIR:AT1G01430.1); Has 1336 Blast hits to 1321 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1329; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|72785 : 136.0) no description available & (reliability: 900.0) & (original description: Putative AXY4, Description = Protein ALTERED XYLOGLUCAN 4, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf01230_97595-103214' '(at1g70480 : 357.0) Domain of unknown function (DUF220); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF220 (InterPro:IPR003863); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF220) (TAIR:AT1G23560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66402 : 105.0) no description available & (reliability: 714.0) & (original description: Putative Sb02g022180, Description = F28C11.19, PFAM = PF02713)' T '35.2' 'not assigned.unknown' 'niben101scf01232_172200-174649' ' no hits & (original description: Putative T15F17.a, Description = Putative uncharacterized protein T15F17.a, PFAM = PF03732)' T '35.2' 'not assigned.unknown' 'niben101scf01232_419639-422265' '(at4g25690 : 125.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative BnaA01g14900D, Description = BnaA01g14900D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01232_528339-539283' '(at1g65270 : 342.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|40024 : 292.0) no description available & (reliability: 684.0) & (original description: Putative BnaC04g29940D, Description = BnaC04g29940D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01232_605177-607776' ' no hits & (original description: Putative PGSC0003DMG400024370, Description = , PFAM = PF13961;PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf01232_638165-666428' '(at5g23490 : 271.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08440.1); Has 202 Blast hits to 197 proteins in 48 species: Archae - 0; Bacteria - 13; Metazoa - 25; Fungi - 9; Plants - 109; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (reliability: 542.0) & (original description: Putative At5g23490, Description = Gb}, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01236_281826-293150' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01236_535584-541585' '(at1g48110 : 479.0) evolutionarily conserved C-terminal region 7 (ECT7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 6 (TAIR:AT3G17330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37112 : 348.0) no description available & (gnl|cdd|67749 : 158.0) no description available & (reliability: 958.0) & (original description: Putative ECT6, Description = At3g17330, PFAM = PF04146)' T '35.2' 'not assigned.unknown' 'niben101scf01237_32692-35205' ' no hits & (original description: Putative D19H, Description = Late embryogenesis abundant protein B19.1A, PFAM = PF00477)' T '35.2' 'not assigned.unknown' 'niben101scf01237_395999-411588' '(at2g40316 : 206.0) FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 27 (InterPro:IPR018939); Has 135 Blast hits to 135 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi - 63; Plants - 31; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative T07M07.21, Description = Putative uncharacterized protein At2g40316, PFAM = PF09451)' T '35.2' 'not assigned.unknown' 'niben101scf01237_400914-404233' ' (original description: Putative rps13, Description = Ribosomal protein S13, PFAM = PF00416)' T '35.2' 'not assigned.unknown' 'niben101scf01237_425855-434181' '(at2g40320 : 576.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 33 (TBL33); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 32 (TAIR:AT3G11030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72785 : 183.0) no description available & (reliability: 1152.0) & (original description: Putative ESK1, Description = Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf01237_532012-535069' '(at2g40320 : 119.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 33 (TBL33); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 32 (TAIR:AT3G11030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative TBL32, Description = Protein trichome birefringence-like 33, PFAM = PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf01237_757912-762591' '(at2g40390 : 514.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64190.1); Has 75 Blast hits to 75 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 1028.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01237_1199387-1201983' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01237_1288627-1291730' ' no hits & (original description: Putative Dif54, Description = BnaA07g31240D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01237_1422822-1425142' '(at3g56360 : 89.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G05250.1); Has 45 Blast hits to 45 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01238_74532-76831' ' no hits & (original description: Putative PGSC0003DMG400038318, Description = Enzymatic polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01238_135836-142221' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01239_331373-334040' '(at4g27660 : 147.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54150.1); Has 115 Blast hits to 109 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative , Description = 28 kDa ribonucleoprotein, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01239_407372-414514' ' no hits & (original description: Putative PGSC0003DMG400000558, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01240_459063-463790' '(at5g20120 : 194.0) unknown protein; Has 54 Blast hits to 54 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative BnaA02g04710D, Description = BnaA02g04710D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01240_985128-988138' '(at3g25910 : 219.0) FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1644) (TAIR:AT3G24740.2); Has 1139 Blast hits to 687 proteins in 95 species: Archae - 0; Bacteria - 20; Metazoa - 459; Fungi - 70; Plants - 423; Viruses - 6; Other Eukaryotes - 161 (source: NCBI BLink). & (gnl|cdd|71240 : 181.0) no description available & (reliability: 438.0) & (original description: Putative TCM_038015, Description = Mitogen-activated protein kinase kinase kinase 1 isoform 1, PFAM = PF07800)' T '35.2' 'not assigned.unknown' 'niben101scf01241_285427-288257' ' no hits & (original description: Putative def7, Description = Defensin, PFAM = PF00304)' T '35.2' 'not assigned.unknown' 'niben101scf01241_350898-358255' '(at1g09290 : 261.0) unknown protein; Has 73 Blast hits to 71 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 11; Plants - 54; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 522.0) & (original description: Putative PGSC0003DMG400030230, Description = Putative ovule protein, PFAM = PF02926)' T '35.2' 'not assigned.unknown' 'niben101scf01241_628811-634578' '(at1g14590 : 465.0) Nucleotide-diphospho-sugar transferase family protein; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT2G02061.1); Has 314 Blast hits to 308 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 294; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 930.0) & (original description: Putative At1g14590, Description = Glycosyltransferase, PFAM = PF03407)' T '35.2' 'not assigned.unknown' 'niben101scf01243_184388-190024' '(at3g17930 : 127.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3007 (InterPro:IPR021562); Has 236 Blast hits to 236 proteins in 83 species: Archae - 0; Bacteria - 117; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative CPLD38, Description = AT3g17930/MEB5_15, PFAM = PF11460)' T '35.2' 'not assigned.unknown' 'niben101scf01247_480184-486617' '(at4g29750 : 647.0) CRS1 / YhbY (CRM) domain-containing protein; FUNCTIONS IN: RNA binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: CRM family member 3A (TAIR:AT3G23070.1); Has 408 Blast hits to 338 proteins in 45 species: Archae - 2; Bacteria - 2; Metazoa - 32; Fungi - 6; Plants - 353; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|37201 : 383.0) no description available & (gnl|cdd|85815 : 91.4) no description available & (reliability: 1294.0) & (original description: Putative At4g29750, Description = CRS1 / YhbY (CRM) domain-containing protein, PFAM = PF01985;PF01985;PF01985)' T '35.2' 'not assigned.unknown' 'niben101scf01249_162212-167540' '(gnl|cdd|69084 : 448.0) no description available & (at1g48450 : 445.0) Protein of unknown function (DUF760); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF760 (InterPro:IPR008479); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF760) (TAIR:AT3G17800.1). & (reliability: 890.0) & (original description: Putative At3g17800, Description = UV-B-induced protein At3g17800, chloroplastic, PFAM = PF05542)' T '35.2' 'not assigned.unknown' 'niben101scf01249_339715-346861' '(at3g17780 : 166.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: B-cell receptor-associated 31-like (TAIR:AT1G48440.1); Has 102 Blast hits to 102 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative pco145813a, Description = Erwinia induced protein 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01252_127367-148585' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01252_238429-240935' ' no hits & (original description: Putative , Description = , PFAM = PF00226)' T '35.2' 'not assigned.unknown' 'niben101scf01258_278278-291992' '(at2g43540 : 105.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 27 Blast hits to 27 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative At2g43540, Description = At2g43540, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01259_139726-156879' ' no hits & (original description: Putative , Description = ZIM transcription factor, PFAM = PF09425;PF06200)' T '35.2' 'not assigned.unknown' 'niben101scf01259_386325-388696' ' no hits & (original description: Putative PGSC0003DMG400012092, Description = Putative uncharacterized protein Sb02g003250, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01259_1048266-1050810' '(at5g46230 : 160.0) Protein of unknown function, DUF538; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT1G09310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86647 : 104.0) no description available & (reliability: 320.0) & (original description: Putative Os06g0538900, Description = Os06g0538900 protein, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben101scf01267_631551-637034' '(at5g35695 : 89.0) CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39785 : 86.3) no description available & (reliability: 178.0) & (original description: Putative , Description = PIF-like transposase, PFAM = PF13359)' T '35.2' 'not assigned.unknown' 'niben101scf01267_631873-634717' '(at5g41980 : 122.0) CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39785 : 107.0) no description available & (reliability: 244.0) & (original description: Putative , Description = CAI-1 autoinducer sensor kinase/phosphatase cqsS isoform 2, PFAM = PF13359)' T '35.2' 'not assigned.unknown' 'niben101scf01269_177080-180093' '(at4g27030 : 351.0) Encodes an unusual palmitate desaturase that is highly substrate specific. It introduces a delta-3 trans double bond at palmitate at the sn-2 position of phosphatidylglycerol.; fatty acid desaturase A (FADA); FUNCTIONS IN: Delta 3-trans hexadecenoic acid phosphatidylglycerol desaturase activity; INVOLVED IN: response to karrikin, phosphatidylglycerol metabolic process, unsaturated fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kua-ubiquitin conjugating enzyme hybrid, localisation (InterPro:IPR019547); BEST Arabidopsis thaliana protein match is: Kua-ubiquitin conjugating enzyme hybrid localisation domain (TAIR:AT1G62190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38221 : 301.0) no description available & (reliability: 702.0) & (original description: Putative FAD4, Description = Fatty acid desaturase 4, chloroplastic, PFAM = PF10520)' T '35.2' 'not assigned.unknown' 'niben101scf01269_302045-307178' '(at1g50740 : 126.0) Transmembrane proteins 14C; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0136, Transmembrane (InterPro:IPR005349); BEST Arabidopsis thaliana protein match is: Transmembrane proteins 14C (TAIR:AT3G20510.1); Has 412 Blast hits to 412 proteins in 97 species: Archae - 0; Bacteria - 35; Metazoa - 172; Fungi - 4; Plants - 187; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|39468 : 94.6) no description available & (gnl|cdd|67275 : 94.2) no description available & (reliability: 252.0) & (original description: Putative FAX5, Description = Protein FATTY ACID EXPORT 5, PFAM = PF03647)' T '35.2' 'not assigned.unknown' 'niben101scf01269_393475-398305' '(at5g54890 : 462.0) RNA-binding CRS1 / YhbY (CRM) domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, C globular stage, F mature embryo stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain-containing protein (TAIR:AT4G31010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85815 : 88.7) no description available & (reliability: 924.0) & (original description: Putative CAF1, Description = CRS2-associated factor 1, PFAM = PF01985;PF01985)' T '35.2' 'not assigned.unknown' 'niben101scf01269_588593-613676' ' no hits & (original description: Putative PGSC0003DMG400029288, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01269_891616-899968' '(at4g26980 : 325.0) RNI-like superfamily protein; Has 687 Blast hits to 557 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 376; Fungi - 15; Plants - 236; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (reliability: 650.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01269_1043687-1046256' '(gnl|cdd|68105 : 107.0) no description available & (at4g04630 : 103.0) Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT4G21970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative MTR_3g052330, Description = Senescence regulator, PFAM = PF04520)' T '35.2' 'not assigned.unknown' 'niben101scf01274_227938-231249' ' no hits & (original description: Putative , Description = Cysteine-rich RLK (RECEPTOR-like protein kinase) 8, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01274_275754-281382' ' no hits & (original description: Putative , Description = Kinesin motor family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01274_515372-517515' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01278_369301-372709' '(at1g79160 : 145.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16500.1); Has 104 Blast hits to 102 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01278_601202-604884' ' no hits & (original description: Putative , Description = , PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben101scf01278_955499-972883' '(at3g12870 : 243.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G56120.1); Has 70 Blast hits to 70 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative Os03g0778400, Description = Os03g0778400 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01278_1076355-1081176' '(at1g16520 : 288.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56080.1); Has 243 Blast hits to 234 proteins in 69 species: Archae - 2; Bacteria - 2; Metazoa - 61; Fungi - 9; Plants - 125; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 576.0) & (original description: Putative Sb01g012800, Description = Putative uncharacterized protein Sb01g012800, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01281_639647-675445' '(at5g44450 : 417.0) methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF858, methyltransferase-like (InterPro:IPR008576); Has 501 Blast hits to 497 proteins in 206 species: Archae - 0; Bacteria - 15; Metazoa - 174; Fungi - 136; Plants - 83; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|86973 : 327.0) no description available & (gnl|cdd|38388 : 179.0) no description available & (reliability: 834.0) & (original description: Putative ntmt1, Description = Alpha N-terminal protein methyltransferase 1, PFAM = PF05891)' T '35.2' 'not assigned.unknown' 'niben101scf01283_47745-51143' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01283_207968-210117' ' no hits & (original description: Putative , Description = , PFAM = PF08137)' T '35.2' 'not assigned.unknown' 'niben101scf01283_282388-287262' '(at1g55915 : 319.0) zinc ion binding; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: WLM (InterPro:IPR013536), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35690.1); Has 560 Blast hits to 511 proteins in 165 species: Archae - 0; Bacteria - 0; Metazoa - 147; Fungi - 231; Plants - 86; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (gnl|cdd|71757 : 192.0) no description available & (gnl|cdd|40039 : 80.0) no description available & (reliability: 638.0) & (original description: Putative BnaA08g00160D, Description = BnaA08g00160D protein, PFAM = PF08325)' T '35.2' 'not assigned.unknown' 'niben101scf01289_922005-924974' ' no hits & (original description: Putative 244, Description = Low temperature and salt responsive family protein, PFAM = PF01679)' T '35.2' 'not assigned.unknown' 'niben101scf01291_414077-479549' '(at5g51340 : 777.0) Tetratricopeptide repeat (TPR)-like superfamily protein; Has 214 Blast hits to 140 proteins in 56 species: Archae - 0; Bacteria - 4; Metazoa - 151; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|37511 : 379.0) no description available & (reliability: 1554.0) & (original description: Putative At5g51340, Description = Tetratricopeptide repeat-containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01291_537686-541612' '(at5g58250 : 211.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2488 (InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative CGL78, Description = BnaA03g09860D protein, PFAM = PF10674)' T '35.2' 'not assigned.unknown' 'niben101scf01292_161731-164259' ' no hits & (original description: Putative BnaA07g21890D, Description = BnaA07g21890D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01293_526635-545694' ' no hits & (original description: Putative PGSC0003DMG400029593, Description = NAC transcription factors 26, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01294_524335-530567' '(at4g28260 : 395.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 50 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 790.0) & (original description: Putative Sb01g018020, Description = Putative uncharacterized protein Sb01g018020, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01295_19278-26391' '(at2g39080 : 417.0) NAD(P)-binding Rossmann-fold superfamily protein; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 818 Blast hits to 811 proteins in 372 species: Archae - 18; Bacteria - 637; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 834.0) & (original description: Putative At2g39070At2g39080, Description = Putative uncharacterized protein At2g39070:At2g39080, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01297_136585-191522' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01297_435941-439485' '(at5g01710 : 676.0) methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Methyltransferase FkbM (InterPro:IPR006342), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1352.0) & (original description: Putative BnaC03g00080D, Description = BnaC03g00080D protein, PFAM = PF08241)' T '35.2' 'not assigned.unknown' 'niben101scf01301_386043-389244' '(at5g19400 : 298.0) Encodes SMG7, a protein that possesses an evolutionarily conserved EST1 domain and exhibits strong homology to human SMG6 (EST1A) and SMG7 (EST1C) proteins. SMG7 plays an evolutionarily conserved role in nonsense-mediated RNA decay (NMD). Required for exit from meiosis. Hypomorphic smg7 alleles render mutant plants sterile by causing an unusual cell-cycle arrest in anaphase II that is characterized by delayed chromosome decondensation and aberrant rearrangement of the meiotic spindle. Disruption of SMG7 causes embryonic lethality.; SMG7; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: meiosis, spindle assembly involved in meiosis, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Telomerase activating protein Est1 (InterPro:IPR019458); BEST Arabidopsis thaliana protein match is: Telomerase activating protein Est1 (TAIR:AT1G28260.2). & (gnl|cdd|37373 : 149.0) no description available & (reliability: 596.0) & (original description: Putative SMG7, Description = Protein SMG7, PFAM = PF10374;PF10373)' T '35.2' 'not assigned.unknown' 'niben101scf01301_478603-484747' '(at1g28120 : 386.0) CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323), Ubiquitin thioesterase Otubain (InterPro:IPR016615), Peptidase C65, otubain (InterPro:IPR019400); Has 413 Blast hits to 411 proteins in 139 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 83; Plants - 88; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|39194 : 279.0) no description available & (reliability: 772.0) & (original description: Putative otub1, Description = Ubiquitin thioesterase otubain-like protein, PFAM = PF10275)' T '35.2' 'not assigned.unknown' 'niben101scf01301_498265-500693' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01304_1376595-1379521' '(gnl|cdd|69434 : 365.0) no description available & (at2g04220 : 350.0) Plant protein of unknown function (DUF868); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT4G12690.2); Has 284 Blast hits to 282 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 284; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 700.0) & (original description: Putative BnaA07g04720D, Description = BnaA07g04720D protein, PFAM = PF05910)' T '35.2' 'not assigned.unknown' 'niben101scf01307_318067-326586' '(at2g35790 : 235.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1301 (InterPro:IPR009724); Has 116 Blast hits to 116 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 53; Fungi - 6; Plants - 49; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|39678 : 169.0) no description available & (reliability: 470.0) & (original description: Putative TIDP2811, Description = BnaA04g20800D protein, PFAM = PF06979)' T '35.2' 'not assigned.unknown' 'niben101scf01310_498136-500152' '(at5g45470 : 149.0) Protein of unknown function (DUF594); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF594 (InterPro:IPR007658); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G45460.1); Has 1360 Blast hits to 854 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1360; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative , Description = , PFAM = PF13968)' T '35.2' 'not assigned.unknown' 'niben101scf01313_148835-151374' ' no hits & (original description: Putative Os07g0686300, Description = Putative E3 ubiquitin-protein ligase Arkadia-like, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf01313_149048-244071' ' no hits & (original description: Putative Os07g0686300, Description = Zinc finger, C3HC4 type (RING finger) protein, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf01316_53964-61943' '(at5g65840 : 299.0) Thioredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT2G37240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|48519 : 110.0) no description available & (gnl|cdd|39698 : 87.3) no description available & (reliability: 598.0) & (original description: Putative glysoja_013041, Description = UPF0308 protein, chloroplastic, PFAM = PF13911)' T '35.2' 'not assigned.unknown' 'niben101scf01318_301427-303205' ' no hits & (original description: Putative orf119b, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01318_303206-304930' ' no hits & (original description: Putative orf101c, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01319_5150-9165' '(at1g36310 : 371.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36545 : 218.0) no description available & (reliability: 742.0) & (original description: Putative Sb04g027790, Description = Putative uncharacterized protein Sb04g027790, PFAM = PF08241)' T '35.2' 'not assigned.unknown' 'niben101scf01319_5172-9249' '(at1g36310 : 419.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36545 : 228.0) no description available & (reliability: 838.0) & (original description: Putative Sb04g027790, Description = Putative uncharacterized protein Sb04g027790, PFAM = PF08241)' T '35.2' 'not assigned.unknown' 'niben101scf01319_317393-322776' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01319_464296-473632' '(at1g30755 : 557.0) Protein of unknown function (DUF668); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700), Protein of unknown function DUF3475 (InterPro:IPR021864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT1G34320.1); Has 465 Blast hits to 399 proteins in 71 species: Archae - 2; Bacteria - 14; Metazoa - 66; Fungi - 16; Plants - 336; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|68572 : 116.0) no description available & (reliability: 1114.0) & (original description: Putative Os06g0716000, Description = Os06g0716000 protein, PFAM = PF05003;PF11961)' T '35.2' 'not assigned.unknown' 'niben101scf01319_671546-679181' '(at4g24175 : 193.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0307 (InterPro:IPR006839); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 386.0) & (original description: Putative , Description = DUF615 family protein, PFAM = PF04751)' T '35.2' 'not assigned.unknown' 'niben101scf01322_291155-297390' '(at2g20020 : 544.0) Promotes the splicing of chloroplast group II introns. Splices clpP-1 and ropC1 introns.; CAF1; FUNCTIONS IN: RNA binding; INVOLVED IN: Group II intron splicing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain-containing protein (TAIR:AT1G23400.1); Has 330 Blast hits to 282 proteins in 47 species: Archae - 0; Bacteria - 32; Metazoa - 20; Fungi - 4; Plants - 265; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|85815 : 92.1) no description available & (reliability: 1088.0) & (original description: Putative Os01g0495900, Description = CRS2-associated factor 1, chloroplastic, PFAM = PF01985;PF01985)' T '35.2' 'not assigned.unknown' 'niben101scf01322_413646-425813' '(at2g25800 : 1066.0) CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT2G20010.2); Has 317 Blast hits to 232 proteins in 40 species: Archae - 0; Bacteria - 8; Metazoa - 29; Fungi - 20; Plants - 175; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|69201 : 422.0) no description available & (reliability: 2132.0) & (original description: Putative Sb02g022610, Description = Putative uncharacterized protein Sb02g022610, PFAM = PF05664)' T '35.2' 'not assigned.unknown' 'niben101scf01326_399608-405914' '(at1g20770 : 148.0) unknown protein; Has 59 Blast hits to 59 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative PGSC0003DMG400001324, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01326_623886-627203' ' no hits & (original description: Putative BNQ1, Description = Transcription factor style2.1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01326_935436-940420' '(at5g39890 : 288.0) Protein of unknown function (DUF1637); FUNCTIONS IN: cysteamine dioxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1637 (InterPro:IPR012864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1637) (TAIR:AT5G15120.1); Has 361 Blast hits to 361 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 102; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|71286 : 277.0) no description available & (gnl|cdd|39482 : 258.0) no description available & (reliability: 576.0) & (original description: Putative PCO2, Description = Plant cysteine oxidase 2, PFAM = PF07847)' T '35.2' 'not assigned.unknown' 'niben101scf01326_953498-964434' ' (original description: Putative Sb03g003380, Description = Putative uncharacterized protein Sb03g003380, PFAM = PF00400;PF00400)' T '35.2' 'not assigned.unknown' 'niben101scf01326_1045257-1051985' '(at3g28700 : 708.0) Protein of unknown function (DUF185); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF185 (InterPro:IPR003788). & (gnl|cdd|38112 : 494.0) no description available & (gnl|cdd|31753 : 250.0) no description available & (reliability: 1416.0) & (original description: Putative midA, Description = NADH dehydrogenase [ubiquinone] complex I, assembly factor 7, PFAM = PF02636)' T '35.2' 'not assigned.unknown' 'niben101scf01326_1263305-1266048' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01328_87477-90802' '(at2g33180 : 144.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative PGSC0003DMG400021288, Description = BnaA04g19200D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01328_232363-245803' '(at5g50890 : 501.0) alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G05260.1); Has 209 Blast hits to 209 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 209; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1002.0) & (original description: Putative ATPHAN, Description = Protein glycosylationmyb-like TTH transcriptional regulator, PFAM = PF01764)' T '35.2' 'not assigned.unknown' 'niben101scf01328_275096-296556' '(at1g06510 : 177.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 376 Blast hits to 369 proteins in 152 species: Archae - 5; Bacteria - 113; Metazoa - 105; Fungi - 46; Plants - 27; Viruses - 2; Other Eukaryotes - 78 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative PGSC0003DMG400021285, Description = F12K11.16, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01329_126949-133338' '(at5g01510 : 261.0) ROOT UV-B SENSITIVE 5 (RUS5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT3G45890.1); Has 426 Blast hits to 424 proteins in 125 species: Archae - 0; Bacteria - 2; Metazoa - 111; Fungi - 69; Plants - 183; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|68458 : 202.0) no description available & (gnl|cdd|39450 : 189.0) no description available & (reliability: 522.0) & (original description: Putative Sb03g006560, Description = Putative uncharacterized protein Sb03g006560, PFAM = PF04884)' T '35.2' 'not assigned.unknown' 'niben101scf01330_183345-188252' '(at4g31130 : 245.0) Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); Has 77 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70227 : 95.0) no description available & (reliability: 490.0) & (original description: Putative At4g31130, Description = At4g31130, PFAM = PF06749)' T '35.2' 'not assigned.unknown' 'niben101scf01330_267356-269769' ' (original description: Putative corC, Description = 14 kDa proline-rich protein DC2.15, PFAM = PF14547)' T '35.2' 'not assigned.unknown' 'niben101scf01334_438349-444300' '(at5g30495 : 191.0) Fcf2 pre-rRNA processing protein; CONTAINS InterPro DOMAIN/s: Fcf2 pre-rRNA processing (InterPro:IPR014810); BEST Arabidopsis thaliana protein match is: Fcf2 pre-rRNA processing protein (TAIR:AT1G54770.1); Has 334 Blast hits to 334 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 124; Plants - 58; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|38310 : 132.0) no description available & (gnl|cdd|87602 : 108.0) no description available & (reliability: 382.0) & (original description: Putative DNTTIP2, Description = Deoxynucleotidyltransferase terminal-interacting protein 2, PFAM = PF08698)' T '35.2' 'not assigned.unknown' 'niben101scf01337_404523-414120' '(at1g40087 : 90.1) Plant transposase (Ptta/En/Spm family); CONTAINS InterPro DOMAIN/s: Transposase, Ptta/En/Spm, plant (InterPro:IPR004252); BEST Arabidopsis thaliana protein match is: Plant transposase (Ptta/En/Spm family) (TAIR:AT3G30200.1); Has 227 Blast hits to 225 proteins in 11 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 225; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative PGSC0003DMG400001172, Description = , PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben101scf01338_336170-338610' ' no hits & (original description: Putative PGSC0003DMG400007474, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01338_361781-370642' '(at3g25680 : 411.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: S-layer homology domain (InterPro:IPR001119); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23890.1); Has 2454 Blast hits to 2065 proteins in 355 species: Archae - 39; Bacteria - 284; Metazoa - 1081; Fungi - 166; Plants - 264; Viruses - 45; Other Eukaryotes - 575 (source: NCBI BLink). & (reliability: 822.0) & (original description: Putative PGSC0003DMG400000804, Description = Protein CHUP1, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01338_536846-545633' '(at1g26110 : 334.0) Encodes Decapping 5, required for mRNA decapping, P-body formation and translational repression during postembryonic development.; decapping 5 (DCP5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: negative regulation of translation, deadenylation-independent decapping of nuclear-transcribed mRNA, cytoplasmic mRNA processing body assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DFDF motif (InterPro:IPR019050), FFD/TFG box motif (InterPro:IPR019053); BEST Arabidopsis thaliana protein match is: decapping 5-like (TAIR:AT5G45330.1); Has 14874 Blast hits to 10327 proteins in 603 species: Archae - 12; Bacteria - 902; Metazoa - 6418; Fungi - 2978; Plants - 1226; Viruses - 261; Other Eukaryotes - 3077 (source: NCBI BLink). & (gnl|cdd|36290 : 140.0) no description available & (gnl|cdd|29723 : 132.0) no description available & (reliability: 668.0) & (original description: Putative DCP5, Description = Protein decapping 5, PFAM = PF09532;PF12701)' T '35.2' 'not assigned.unknown' 'niben101scf01338_639730-642032' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01339_275630-288889' '(at2g43320 : 489.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: Putative methyltransferase family protein (TAIR:AT4G14000.1); Has 304 Blast hits to 295 proteins in 127 species: Archae - 0; Bacteria - 2; Metazoa - 118; Fungi - 41; Plants - 98; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|38131 : 125.0) no description available & (reliability: 978.0) & (original description: Putative At2g43320, Description = At2g43320/T1O24.6, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01340_427834-435099' '(at1g08760 : 579.0) Plant protein of unknown function (DUF936); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF936, plant (InterPro:IPR010341); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF936) (TAIR:AT3G14170.1); Has 718 Blast hits to 418 proteins in 99 species: Archae - 0; Bacteria - 149; Metazoa - 50; Fungi - 25; Plants - 280; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (gnl|cdd|69589 : 375.0) no description available & (reliability: 1158.0) & (original description: Putative At3g19610, Description = DUF936 family protein, PFAM = PF06075)' T '35.2' 'not assigned.unknown' 'niben101scf01341_357158-360762' '(at2g15020 : 585.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64190.1); Has 72 Blast hits to 72 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1170.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01341_425035-427550' ' no hits & (original description: Putative zfp1, Description = Zinc finger protein 7, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01350_697248-699721' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01351_17329-20044' ' no hits & (original description: Putative KK1_033282, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF00098;PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf01352_56752-69740' '(at2g45380 : 147.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G22740.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative PGSC0003DMG400003933, Description = Myelodysplasia-myeloid leukemia factor 1-interacting protein, PFAM = PF10248)' T '35.2' 'not assigned.unknown' 'niben101scf01352_220646-226072' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01358_34107-37581' '(at1g14990 : 194.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 388.0) & (original description: Putative Sb03g027290, Description = Putative uncharacterized protein Sb03g027290, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01358_182832-194234' '(at1g23110 : 367.0) unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70900.1). & (reliability: 734.0) & (original description: Putative BnaC06g32050D, Description = BnaC06g32050D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01359_287217-290840' '(at2g27290 : 173.0) Protein of unknown function (DUF1279); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1279 (InterPro:IPR009688); Has 214 Blast hits to 212 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 123; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|39726 : 113.0) no description available & (gnl|cdd|87180 : 113.0) no description available & (reliability: 346.0) & (original description: Putative At2g27290, Description = At2g27290, PFAM = PF06916)' T '35.2' 'not assigned.unknown' 'niben101scf01365_160317-187543' '(at1g34320 : 780.0) Protein of unknown function (DUF668); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700), Protein of unknown function DUF3475 (InterPro:IPR021864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT5G08660.1); Has 339 Blast hits to 273 proteins in 21 species: Archae - 0; Bacteria - 1; Metazoa - 3; Fungi - 0; Plants - 335; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68572 : 110.0) no description available & (reliability: 1560.0) & (original description: Putative At1g34320, Description = At1g34320, PFAM = PF05003;PF11961)' T '35.2' 'not assigned.unknown' 'niben101scf01368_64505-67231' ' no hits & (original description: Putative NAC1, Description = NAC transcription factor, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01369_12529-16181' '(at1g20870 : 164.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G54850.1); Has 109 Blast hits to 81 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative Ntshsp, Description = Small heat shock protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01369_668936-685788' '(at1g42960 : 130.0) expressed protein localized to the inner membrane of the chloroplast.; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16660.1); Has 120 Blast hits to 120 proteins in 39 species: Archae - 0; Bacteria - 43; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative TCM_034426, Description = Localized to the inner membrane of the chloroplast, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01370_21318-29062' ' no hits & (original description: Putative , Description = Enoyl-CoA hydratase/isomerase, PFAM = PF16113)' T '35.2' 'not assigned.unknown' 'niben101scf01371_238892-243904' '(gnl|cdd|70188 : 177.0) no description available & (at4g36660 : 152.0) Protein of unknown function (DUF1195); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1195 (InterPro:IPR010608); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1195) (TAIR:AT5G65650.1); Has 67 Blast hits to 67 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative At4g36660, Description = At4g36660, PFAM = PF06708)' T '35.2' 'not assigned.unknown' 'niben101scf01371_296364-301359' '(at1g75160 : 445.0) Protein of unknown function (DUF620); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF620 (InterPro:IPR006873); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF620) (TAIR:AT5G66740.1); Has 216 Blast hits to 215 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 216; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68363 : 355.0) no description available & (reliability: 890.0) & (original description: Putative F1I16_130, Description = Putative uncharacterized protein F1I16_130, PFAM = PF04788)' T '35.2' 'not assigned.unknown' 'niben101scf01371_310987-316656' '(at3g56870 : 144.0) unknown protein; Has 204 Blast hits to 201 proteins in 58 species: Archae - 0; Bacteria - 10; Metazoa - 72; Fungi - 8; Plants - 41; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01371_441094-445076' '(at1g75140 : 572.0) unknown protein; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19370.1); Has 51 Blast hits to 49 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 1144.0) & (original description: Putative At1g75140, Description = Uncharacterized membrane protein At1g75140, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01371_681858-694692' '(at1g45150 : 985.0) unknown protein; Has 219 Blast hits to 202 proteins in 78 species: Archae - 0; Bacteria - 166; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 1970.0) & (original description: Putative BnaC08g04990D, Description = BnaC08g04990D protein, PFAM = PF13320)' T '35.2' 'not assigned.unknown' 'niben101scf01371_811051-817909' '(at4g16580 : 504.0) Protein phosphatase 2C family protein; FUNCTIONS IN: phosphoprotein phosphatase activity, catalytic activity; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Sporulation stage II, protein E C-terminal (InterPro:IPR010822); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66720.1); Has 838 Blast hits to 828 proteins in 210 species: Archae - 0; Bacteria - 2; Metazoa - 184; Fungi - 235; Plants - 232; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (gnl|cdd|36593 : 315.0) no description available & (reliability: 1008.0) & (original description: Putative At4g16580, Description = Probable protein phosphatase 2C 55, PFAM = PF07228)' T '35.2' 'not assigned.unknown' 'niben101scf01374_367653-370321' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01374_499811-504756' '(at1g52155 : 424.0) unknown protein; Has 37 Blast hits to 37 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 848.0) & (original description: Putative BnaA06g01930D, Description = BnaA06g01930D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01374_762860-766228' '(at1g79770 : 142.0) Protein of unknown function (DUF1677); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1677, plant (InterPro:IPR012876); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1677) (TAIR:AT5G25840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71349 : 134.0) no description available & (reliability: 284.0) & (original description: Putative BnaC06g18890D, Description = CASP-like protein, PFAM = PF07911)' T '35.2' 'not assigned.unknown' 'niben101scf01374_820144-822743' '(at1g52140 : 131.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative , Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben101scf01374_857561-867723' '(at1g15215 : 213.0) BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative SHH1, Description = Protein SAWADEE HOMEODOMAIN HOMOLOG 1, PFAM = PF16719)' T '35.2' 'not assigned.unknown' 'niben101scf01374_1289018-1295676' '(at3g21360 : 514.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Taurine catabolism dioxygenase TauD/TfdA (InterPro:IPR003819); Has 1029 Blast hits to 1021 proteins in 229 species: Archae - 0; Bacteria - 729; Metazoa - 46; Fungi - 17; Plants - 110; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|86064 : 87.3) no description available & (reliability: 1028.0) & (original description: Putative PGSC0003DMG400002609, Description = Taurine catabolism dioxygenase TauD/TfdA, PFAM = PF02668;PF02668)' T '35.2' 'not assigned.unknown' 'niben101scf01374_1499279-1503740' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01374_1503040-1505071' ' no hits & (original description: Putative OXS3, Description = Oxidative stress 3, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01375_410987-414095' '(at1g64080 : 81.3) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52870.1); Has 1546 Blast hits to 738 proteins in 176 species: Archae - 0; Bacteria - 143; Metazoa - 278; Fungi - 131; Plants - 95; Viruses - 4; Other Eukaryotes - 895 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01375_598067-601014' ' no hits & (original description: Putative PGSC0003DMG400001033, Description = , PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'niben101scf01377_148776-153288' '(at5g11730 : 460.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G25970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86287 : 439.0) no description available & (reliability: 920.0) & (original description: Putative Sb01g009220, Description = Putative uncharacterized protein Sb01g009220, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben101scf01377_164936-167289' '(at4g32960 : 171.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32970.1); Has 106 Blast hits to 106 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative At4g32960, Description = At4g32960, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01380_176991-180586' '(at5g21940 : 94.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative At3g43850, Description = Putative uncharacterized protein T28A8_140, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01380_216998-225659' '(at2g26310 : 373.0) Chalcone-flavanone isomerase family protein; FUNCTIONS IN: intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT3G63170.1). & (reliability: 746.0) & (original description: Putative FAP2, Description = Fatty-acid-binding protein 2, PFAM = PF16035)' T '35.2' 'not assigned.unknown' 'niben101scf01382_92680-95018' ' (original description: Putative RPP2B, Description = 60S acidic ribosomal protein P2B, PFAM = PF00428)' T '35.2' 'not assigned.unknown' 'niben101scf01382_149311-151883' ' no hits & (original description: Putative PGSC0003DMG400014888, Description = RNase H family protein, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'niben101scf01382_420712-430712' '(at4g30720 : 944.0) Encodes a putative oxidoreductase/electron carrier detected in the chloroplast stroma that is essential to ensure a correct electron flow through the photosynthetic chain and, hence, photosynthesis efficiency and normal growth. Mutations in the Col-0 allele result in pale green pigmentation and defective growth.; FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, FAD binding; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Adrenodoxin reductase (InterPro:IPR000759), FAD dependent oxidoreductase (InterPro:IPR006076), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); Has 2466 Blast hits to 2466 proteins in 951 species: Archae - 126; Bacteria - 2117; Metazoa - 0; Fungi - 2; Plants - 26; Viruses - 0; Other Eukaryotes - 195 (source: NCBI BLink). & (gnl|cdd|32579 : 300.0) no description available & (reliability: 1888.0) & (original description: Putative dadA, Description = D-amino acid dehydrogenase small subunit, PFAM = PF01494)' T '35.2' 'not assigned.unknown' 'niben101scf01383_8945-19016' '(at5g21070 : 314.0) unknown protein; Has 115 Blast hits to 115 proteins in 34 species: Archae - 1; Bacteria - 36; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 628.0) & (original description: Putative BnaC09g36810D, Description = BnaC09g36810D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01383_337428-339831' ' no hits & (original description: Putative orf237, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01383_339832-341946' ' no hits & (original description: Putative orf141, Description = Reverse transcriptase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01383_992161-994757' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01383_992372-994894' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01385_19227-24649' '(at4g37080 : 441.0) Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT5G42690.2). & (gnl|cdd|68359 : 188.0) no description available & (reliability: 882.0) & (original description: Putative BnaC01g01850D, Description = BnaC01g01850D protein, PFAM = PF14389;PF04784)' T '35.2' 'not assigned.unknown' 'niben101scf01385_1229695-1238661' '(at4g34310 : 1170.0) alpha/beta-Hydrolases superfamily protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37240 : 163.0) no description available & (reliability: 2340.0) & (original description: Putative At4g34310, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01392_24885-30130' '(at4g27720 : 756.0) Major facilitator superfamily protein; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G49310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39533 : 692.0) no description available & (gnl|cdd|86904 : 558.0) no description available & (reliability: 1512.0) & (original description: Putative MFSD5, Description = Major facilitator superfamily domain-containing protein 5, PFAM = PF05631)' T '35.2' 'not assigned.unknown' 'niben101scf01392_181125-184065' '(at4g27745 : 179.0) Yippee family putative zinc-binding protein; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: Yippee family putative zinc-binding protein (TAIR:AT5G53940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66871 : 142.0) no description available & (gnl|cdd|38609 : 138.0) no description available & (q8s5m8|yipl_orysa : 126.0) Putative yippee-like protein Os10g0369500 - Oryza sativa (Rice) & (reliability: 358.0) & (original description: Putative ypel, Description = Protein yippee-like, PFAM = PF03226)' T '35.2' 'not assigned.unknown' 'niben101scf01392_225812-231042' '(at4g27750 : 415.0) A genetic locus involved in sugar sensing and coordinating carbohydrate synthesis and utilization by the whole plant. Lines carrying mutations in this gene shows restricted carbohydrate allocation to plant growth and seed set, elevated chlorophyll levels, and reduced sugar induction of starch biosynthesis.; IMPAIRED SUCROSE INDUCTION 1 (ISI1); FUNCTIONS IN: binding; INVOLVED IN: sucrose mediated signaling, regulation of carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cell division control 14, SIN component (InterPro:IPR012535), Armadillo-type fold (InterPro:IPR016024); Has 74 Blast hits to 74 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 31; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 830.0) & (original description: Putative isi1, Description = Impaired sucrose induction 1, PFAM = PF08045)' T '35.2' 'not assigned.unknown' 'niben101scf01393_25350-27958' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01393_302821-306751' '(at1g21830 : 101.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G44608.1); Has 49 Blast hits to 49 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative , Description = , PFAM = PF05340)' T '35.2' 'not assigned.unknown' 'niben101scf01396_536118-543695' '(at5g11420 : 553.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF642 (TAIR:AT5G25460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68437 : 553.0) no description available & (reliability: 1106.0) & (original description: Putative BnaC09g45170D, Description = BnaC09g45170D protein, PFAM = PF04862;PF04862)' T '35.2' 'not assigned.unknown' 'niben101scf01396_557646-564078' ' no hits & (original description: Putative , Description = , PFAM = PF00010)' T '35.2' 'not assigned.unknown' 'niben101scf01397_88163-91638' '(at4g40020 : 92.4) Myosin heavy chain-related protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT5G16730.1); Has 160438 Blast hits to 85353 proteins in 3205 species: Archae - 2021; Bacteria - 26641; Metazoa - 65466; Fungi - 13044; Plants - 8368; Viruses - 589; Other Eukaryotes - 44309 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative PGSC0003DMG400016153, Description = Myosin heavy chain-related protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01398_102614-105900' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01399_1137-3511' '(at1g13810 : 124.0) Restriction endonuclease, type II-like superfamily protein; FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: YqaJ viral recombinase family (InterPro:IPR019080), Exonuclease, phage-type/RecB, C-terminal (InterPro:IPR011604), Restriction endonuclease, type II-like (InterPro:IPR011335); BEST Arabidopsis thaliana protein match is: Restriction endonuclease, type II-like superfamily protein (TAIR:AT1G67660.1); Has 316 Blast hits to 315 proteins in 62 species: Archae - 0; Bacteria - 48; Metazoa - 55; Fungi - 0; Plants - 63; Viruses - 14; Other Eukaryotes - 136 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative At1g13810, Description = Exonuclease, phage-type/RecB, C-terminal, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01399_76353-78664' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01400_34259-40966' '(at2g32500 : 283.0) Stress responsive alpha-beta barrel domain protein; CONTAINS InterPro DOMAIN/s: Stress responsive alpha-beta barrel (InterPro:IPR013097), Dimeric alpha-beta barrel (InterPro:IPR011008); BEST Arabidopsis thaliana protein match is: Stress responsive alpha-beta barrel domain protein (TAIR:AT2G31670.1); Has 68 Blast hits to 66 proteins in 17 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 566.0) & (original description: Putative , Description = , PFAM = PF07876)' T '35.2' 'not assigned.unknown' 'niben101scf01400_35169-85343' '(at2g32500 : 217.0) Stress responsive alpha-beta barrel domain protein; CONTAINS InterPro DOMAIN/s: Stress responsive alpha-beta barrel (InterPro:IPR013097), Dimeric alpha-beta barrel (InterPro:IPR011008); BEST Arabidopsis thaliana protein match is: Stress responsive alpha-beta barrel domain protein (TAIR:AT2G31670.1); Has 68 Blast hits to 66 proteins in 17 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 434.0) & (original description: Putative , Description = , PFAM = PF07876)' T '35.2' 'not assigned.unknown' 'niben101scf01402_190649-195028' '(at5g14970 : 287.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 579 Blast hits to 397 proteins in 95 species: Archae - 0; Bacteria - 294; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink). & (reliability: 574.0) & (original description: Putative BnaA09g52750D, Description = BnaA09g52750D protein, PFAM = PF05542;PF05542)' T '35.2' 'not assigned.unknown' 'niben101scf01406_19540-24223' '(at5g01030 : 147.0) Protein of unknown function (DUF3527); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3527 (InterPro:IPR021916); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3527) (TAIR:AT2G37930.1); Has 286 Blast hits to 251 proteins in 78 species: Archae - 0; Bacteria - 81; Metazoa - 28; Fungi - 27; Plants - 128; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative , Description = , PFAM = PF12043)' T '35.2' 'not assigned.unknown' 'niben101scf01406_334911-340512' '(at2g37960 : 276.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54060.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 552.0) & (original description: Putative BnaC04g45580D, Description = BnaC04g45580D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01409_29425-35811' '(at5g20590 : 585.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 5 (TBL5); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT1G60790.1); Has 1351 Blast hits to 1334 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1350; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|72785 : 165.0) no description available & (reliability: 1170.0) & (original description: Putative TBL6, Description = Protein trichome birefringence-like 6, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf01409_433891-458473' '(at4g25770 : 441.0) alpha/beta-Hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G10040.1). & (gnl|cdd|39573 : 283.0) no description available & (gnl|cdd|68625 : 229.0) no description available & (reliability: 882.0) & (original description: Putative At4g25770, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF05057)' T '35.2' 'not assigned.unknown' 'niben101scf01409_882505-884810' '(at5g35732 : 98.6) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04795.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 197.2) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01412_38423-40791' ' no hits & (original description: Putative Sirup, Description = SDH assembly factor 4, PFAM = PF07896)' T '35.2' 'not assigned.unknown' 'niben101scf01413_341620-354498' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01415_78206-80415' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01417_721224-737026' '(at2g38500 : 160.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Has 51 Blast hits to 51 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01418_222135-224912' '(gnl|cdd|71349 : 119.0) no description available & (at1g72510 : 110.0) Protein of unknown function (DUF1677); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1677, plant (InterPro:IPR012876); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1677) (TAIR:AT2G09970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative BnaA02g05020D, Description = BnaA02g05020D protein, PFAM = PF07911)' T '35.2' 'not assigned.unknown' 'niben101scf01418_307089-312647' '(at2g34160 : 149.0) Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein (InterPro:IPR002775), Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related (InterPro:IPR014560); BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein (TAIR:AT1G29250.1); Has 155 Blast hits to 155 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative nab, Description = Alba DNA/RNA-binding protein, PFAM = PF01918)' T '35.2' 'not assigned.unknown' 'niben101scf01418_420332-425695' '(at5g25360 : 170.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1). & (reliability: 340.0) & (original description: Putative At3g15770, Description = AT3G15770 protein, PFAM = PF13259;PF13259)' T '35.2' 'not assigned.unknown' 'niben101scf01420_91001-99664' '(at1g26110 : 98.6) Encodes Decapping 5, required for mRNA decapping, P-body formation and translational repression during postembryonic development.; decapping 5 (DCP5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: negative regulation of translation, deadenylation-independent decapping of nuclear-transcribed mRNA, cytoplasmic mRNA processing body assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DFDF motif (InterPro:IPR019050), FFD/TFG box motif (InterPro:IPR019053); BEST Arabidopsis thaliana protein match is: decapping 5-like (TAIR:AT5G45330.1); Has 14874 Blast hits to 10327 proteins in 603 species: Archae - 12; Bacteria - 902; Metazoa - 6418; Fungi - 2978; Plants - 1226; Viruses - 261; Other Eukaryotes - 3077 (source: NCBI BLink). & (reliability: 197.2) & (original description: Putative DCP5, Description = Decapping 5, PFAM = PF09532)' T '35.2' 'not assigned.unknown' 'niben101scf01422_155603-164300' '(at2g28310 : 628.0) Protein of unknown function (DUF707); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G08040.2); Has 326 Blast hits to 325 proteins in 27 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 0; Plants - 305; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|68772 : 536.0) no description available & (reliability: 1256.0) & (original description: Putative At2g28310, Description = Putative uncharacterized protein At2g28310, PFAM = PF05212)' T '35.2' 'not assigned.unknown' 'niben101scf01423_31035-39153' '(at1g69060 : 154.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); Has 3526 Blast hits to 2426 proteins in 300 species: Archae - 4; Bacteria - 245; Metazoa - 1133; Fungi - 271; Plants - 159; Viruses - 2; Other Eukaryotes - 1712 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative At1g69060, Description = BnaA07g27680D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01423_89823-112269' '(at2g01050 : 92.0) zinc ion binding;nucleic acid binding; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G31430.1); Has 369 Blast hits to 365 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 367; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative , Description = , PFAM = PF14111)' T '35.2' 'not assigned.unknown' 'niben101scf01423_400191-404683' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01426_610509-626678' '(at2g20635 : 647.0) ATP binding;protein kinases;protein serine/threonine kinases; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Mitotic checkpoint serine/threonine protein kinase, Bub1 (InterPro:IPR015661), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Mad3/BUB1 homology region 1 (InterPro:IPR013212), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: BUB1-related (BUB1: budding uninhibited by benzymidazol 1) (TAIR:AT2G33560.1); Has 7386 Blast hits to 7115 proteins in 591 species: Archae - 30; Bacteria - 832; Metazoa - 2305; Fungi - 1186; Plants - 1328; Viruses - 3; Other Eukaryotes - 1702 (source: NCBI BLink). & (gnl|cdd|36381 : 242.0) no description available & (gnl|cdd|87489 : 85.6) no description available & (reliability: 1294.0) & (original description: Putative BUB1, Description = Mitotic checkpoint serine/threonine-protein kinase BUB1, PFAM = PF00069;PF08311)' T '35.2' 'not assigned.unknown' 'niben101scf01427_121074-133116' '(at5g35080 : 299.0) INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate receptor, binding (InterPro:IPR009011), Glucosidase II beta subunit-like (InterPro:IPR012913); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38604 : 162.0) no description available & (reliability: 598.0) & (original description: Putative OS9, Description = Protein OS-9 homolog, PFAM = PF07915)' T '35.2' 'not assigned.unknown' 'niben101scf01428_86286-88621' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01428_420894-423280' ' (original description: Putative ERF096, Description = Ethylene-responsive transcription factor ERF096, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'niben101scf01429_305760-313016' '(at3g11680 : 468.0) Aluminium activated malate transporter family protein; INVOLVED IN: response to aluminum ion; CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G08440.1); Has 773 Blast hits to 771 proteins in 231 species: Archae - 0; Bacteria - 374; Metazoa - 0; Fungi - 30; Plants - 352; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|39909 : 366.0) no description available & (gnl|cdd|85194 : 163.0) no description available & (reliability: 936.0) & (original description: Putative ALMT8, Description = Aluminum-activated malate transporter 8, PFAM = PF11744)' T '35.2' 'not assigned.unknown' 'niben101scf01432_352465-360028' '(at4g34090 : 377.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23370.1). & (reliability: 754.0) & (original description: Putative Os03g0109700, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01433_231486-233953' ' no hits & (original description: Putative , Description = , PFAM = PF09791)' T '35.2' 'not assigned.unknown' 'niben101scf01433_231489-233959' ' no hits & (original description: Putative , Description = , PFAM = PF09791)' T '35.2' 'not assigned.unknown' 'niben101scf01433_746332-763527' '(at2g16460 : 277.0) Protein of unknown function (DUF1640); FUNCTIONS IN: metal ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1640 (InterPro:IPR012439); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1640) (TAIR:AT3G51090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|71238 : 207.0) no description available & (gnl|cdd|38366 : 204.0) no description available & (reliability: 554.0) & (original description: Putative TCM_000257, Description = Uncharacterized protein isoform 1, PFAM = PF07798)' T '35.2' 'not assigned.unknown' 'niben101scf01433_762553-768431' '(at3g51100 : 161.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative , Description = Ferulic acid 5-hydroxylase 1, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01434_168404-174981' '(at1g54990 : 392.0) auxin response mutant (AXR4); AUXIN RESISTANT 4 (AXR4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to mechanical stimulus, auxin polar transport; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; Has 139 Blast hits to 139 proteins in 43 species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 784.0) & (original description: Putative AXR4, Description = Protein AUXIN RESPONSE 4, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01435_38246-48060' ' no hits & (original description: Putative At5g53650, Description = At5g53650, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01435_76357-79364' '(at1g64690 : 130.0) Encodes BRANCHLESS TRICHOME (BLT) involved in trichome development. A large portion of the internal amino acid sequence of BLT is predicted to form a coiled-coil domain. BLT mutants form branchless trichomes with blunt tips.; BRANCHLESS TRICHOME (BLT); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G50660.1); Has 8499 Blast hits to 5324 proteins in 475 species: Archae - 37; Bacteria - 382; Metazoa - 3924; Fungi - 509; Plants - 391; Viruses - 45; Other Eukaryotes - 3211 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative BLT, Description = Branchless trichome, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01435_296938-299633' '(at1g64700 : 145.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61920.1); Has 48 Blast hits to 47 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative , Description = , PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf01436_202264-208527' '(at1g28260 : 530.0) Telomerase activating protein Est1; CONTAINS InterPro DOMAIN/s: Telomerase activating protein Est1 (InterPro:IPR019458); BEST Arabidopsis thaliana protein match is: Telomerase activating protein Est1 (TAIR:AT5G19400.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37373 : 199.0) no description available & (reliability: 1060.0) & (original description: Putative F383_23932, Description = Telomerase-binding EST1A, PFAM = PF10373;PF10374)' T '35.2' 'not assigned.unknown' 'niben101scf01436_250176-254634' '(at1g28250 : 99.8) unknown protein; Has 22 Blast hits to 22 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 199.6) & (original description: Putative BnaA09g27420D, Description = BnaA09g27420D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01436_344094-347379' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01436_491527-497566' '(at2g20760 : 159.0) Clathrin light chain protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin light chain (InterPro:IPR000996); BEST Arabidopsis thaliana protein match is: Clathrin light chain protein (TAIR:AT2G40060.1); Has 1791 Blast hits to 1279 proteins in 282 species: Archae - 0; Bacteria - 563; Metazoa - 557; Fungi - 96; Plants - 161; Viruses - 0; Other Eukaryotes - 414 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative At2g20760, Description = Clathrin light chain 1, PFAM = PF01086)' T '35.2' 'not assigned.unknown' 'niben101scf01437_321038-323556' ' no hits & (original description: Putative PGSC0003DMG400018491, Description = Growth-regulating factor 5, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01438_1022937-1028219' '(at5g57460 : 736.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 166 Blast hits to 166 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 112; Fungi - 4; Plants - 36; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|37609 : 226.0) no description available & (reliability: 1472.0) & (original description: Putative At5g57460, Description = At5g57460, PFAM = PF10291)' T '35.2' 'not assigned.unknown' 'niben101scf01440_545873-550841' '(at3g11590 : 412.0) unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22310.1); Has 22320 Blast hits to 15179 proteins in 1213 species: Archae - 372; Bacteria - 2307; Metazoa - 10906; Fungi - 1700; Plants - 1146; Viruses - 65; Other Eukaryotes - 5824 (source: NCBI BLink). & (reliability: 824.0) & (original description: Putative F24K9.26, Description = At3g11590/F24K9_26, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01443_86856-91020' '(at3g13780 : 146.0) SMAD/FHA domain-containing protein ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984); Has 13742 Blast hits to 8952 proteins in 462 species: Archae - 7; Bacteria - 1954; Metazoa - 5288; Fungi - 1773; Plants - 718; Viruses - 188; Other Eukaryotes - 3814 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative At3g13780, Description = SMAD/FHA domain-containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01445_36353-45752' '(at2g06005 : 404.0) Encodes one of the FRI interacting proteins: FRIGIDA INTERACTING PROTEIN 1 (FIP1)/At2g06005, FIP2/ At4g17060. FRI (At4G00650) is a major determinant of natural variation in Arabidopsis flowering time.; FRIGIDA interacting protein 1 (FIP1); FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G20580.2); Has 283 Blast hits to 279 proteins in 95 species: Archae - 0; Bacteria - 30; Metazoa - 98; Fungi - 20; Plants - 56; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (reliability: 808.0) & (original description: Putative FIP1, Description = Expressed protein, PFAM = PF14802)' T '35.2' 'not assigned.unknown' 'niben101scf01445_73814-82732' '(at3g21465 : 397.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G15640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 794.0) & (original description: Putative At4g15640, Description = At4g15640, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01447_89589-94252' '(at5g25170 : 300.0) PPPDE putative thiol peptidase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT2G25190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35545 : 246.0) no description available & (gnl|cdd|69428 : 180.0) no description available & (reliability: 600.0) & (original description: Putative At5g25170, Description = At5g25170, PFAM = PF05903)' T '35.2' 'not assigned.unknown' 'niben101scf01448_173889-197516' '(at3g27670 : 1538.0) A novel protein, did not show high similarity to any protein of known function; reveals a novel genetic connection between lipid synthesis and embryo development. Expressed in all tissues examined including leaves, flowers, roots, stems, and siliques, but accumulation levels were not correlated with the degree to which different organs appeared affected by the mutation. Mutant plants showed alterations in the cuticular wax profiles and embryo development.; RESURRECTION1 (RST1); FUNCTIONS IN: binding; INVOLVED IN: cuticle hydrocarbon biosynthetic process, embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 92 Blast hits to 88 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 50; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 3076.0) & (original description: Putative PGSC0003DMG400012627, Description = Protein resurrection protein, putative, PFAM = PF12530;PF12530)' T '35.2' 'not assigned.unknown' 'niben101scf01448_300942-308784' '(at5g14550 : 513.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT1G11940.1); Has 576 Blast hits to 576 proteins in 20 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 546; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|86287 : 340.0) no description available & (reliability: 1026.0) & (original description: Putative BnaC09g42920D, Description = BnaC09g42920D protein, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben101scf01450_229936-232847' '(at5g42750 : 88.6) Encodes a plasma-membrane associated phosphoprotein that interacts directly with the kinase domain of BRI1. It interferes with the interaction between BRI1 with its signalling partner, the plasma membrane localised LRR-receptor kinase BAK1.; BRI1 kinase inhibitor 1 (BKI1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative BKI1, Description = BRI1 kinase inhibitor 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01450_434825-445124' '(at1g05780 : 134.0) Vacuolar ATPase assembly integral membrane protein VMA21-like domain; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Vacuolar ATPase assembly integral membrane protein VMA21-like domain (InterPro:IPR019013); BEST Arabidopsis thaliana protein match is: Vacuolar ATPase assembly integral membrane protein VMA21-like domain (TAIR:AT2G31710.1); Has 33 Blast hits to 33 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative At1g05780, Description = Vacuolar ATPase assembly integral membrane protein VMA21 homolog, PFAM = PF09446)' T '35.2' 'not assigned.unknown' 'niben101scf01451_382515-394076' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01453_277149-300234' '(at4g09830 : 160.0) Uncharacterised conserved protein UCP009193; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP009193 (InterPro:IPR016549); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP009193 (TAIR:AT5G64780.1); Has 86 Blast hits to 86 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative , Description = Putative nuclear receptor subfamily 2 group C member 2-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01453_566184-568483' ' no hits & (original description: Putative , Description = , PFAM = PF12023)' T '35.2' 'not assigned.unknown' 'niben101scf01460_394390-408174' '(at1g22970 : 322.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71150.1); Has 134 Blast hits to 132 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 66; Fungi - 10; Plants - 48; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 644.0) & (original description: Putative BnaC05g18370D, Description = BnaC05g18370D protein, PFAM = PF13324)' T '35.2' 'not assigned.unknown' 'niben101scf01462_284575-289171' ' no hits & (original description: Putative NFD6, Description = Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01463_111413-134773' '(at1g78915 : 361.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734). & (reliability: 722.0) & (original description: Putative At1g78915, Description = Tetratricopeptide repeat-containing protein, PFAM = PF13174;PF13432)' T '35.2' 'not assigned.unknown' 'niben101scf01463_697265-700273' '(at5g50090 : 118.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative TCM_010230, Description = Serine/threonine-protein kinase TAO3, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf01463_756903-760673' '(at5g50100 : 236.0) Putative thiol-disulphide oxidoreductase DCC; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin-like fold (InterPro:IPR012336), Putative thiol-disulphide oxidoreductase DCC (InterPro:IPR007263); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative RintRC_1507, Description = Cell division inhibitor, PFAM = PF04134)' T '35.2' 'not assigned.unknown' 'niben101scf01464_37204-51283' '(at5g22875 : 100.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 32 Blast hits to 32 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative PHYPADRAFT_168522, Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01469_188475-207281' '(at5g66810 : 627.0) CONTAINS InterPro DOMAIN/s: CTLH, C-terminal LisH motif (InterPro:IPR006595); BEST Arabidopsis thaliana protein match is: LisH and RanBPM domains containing protein (TAIR:AT1G61150.1); Has 333 Blast hits to 242 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 47; Plants - 152; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|37870 : 109.0) no description available & (reliability: 1254.0) & (original description: Putative , Description = , PFAM = PF10607)' T '35.2' 'not assigned.unknown' 'niben101scf01469_528951-531322' ' no hits & (original description: Putative PGSC0003DMG400040657, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01474_150927-158946' '(at3g45050 : 112.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative , Description = Putative chaperone DnaJ-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01477_1-2342' '(at2g16030 : 161.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G26730.1); Has 270 Blast hits to 270 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 250; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative At2g16030, Description = Putative uncharacterized protein At2g16030, PFAM = PF08241)' T '35.2' 'not assigned.unknown' 'niben101scf01479_180819-186595' ' no hits & (original description: Putative PGSC0003DMG400015308, Description = Helicase SEN1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01481_205283-207603' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01481_208667-218827' '(at5g04440 : 323.0) Protein of unknown function (DUF1997); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1997 (InterPro:IPR018971); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1997) (TAIR:AT4G31115.1); Has 266 Blast hits to 266 proteins in 73 species: Archae - 0; Bacteria - 111; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|87911 : 159.0) no description available & (reliability: 646.0) & (original description: Putative PGSC0003DMG400023376, Description = At5g04440, PFAM = PF09366)' T '35.2' 'not assigned.unknown' 'niben101scf01481_268600-271196' ' (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01482_198781-203194' '(at3g46750 : 93.6) unknown protein; Has 2631 Blast hits to 1984 proteins in 271 species: Archae - 6; Bacteria - 163; Metazoa - 1232; Fungi - 253; Plants - 141; Viruses - 8; Other Eukaryotes - 828 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01485_51230-62899' '(at5g10710 : 404.0) INVOLVED IN: chromosome segregation, cell division; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Centromere protein Cenp-O (InterPro:IPR018464). & (reliability: 808.0) & (original description: Putative BnaC03g04500D, Description = BnaC03g04500D protein, PFAM = PF09496)' T '35.2' 'not assigned.unknown' 'niben101scf01486_147508-154373' '(at1g16210 : 169.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1014 (InterPro:IPR010422); Has 16107 Blast hits to 8386 proteins in 1107 species: Archae - 26; Bacteria - 3370; Metazoa - 4013; Fungi - 1516; Plants - 526; Viruses - 120; Other Eukaryotes - 6536 (source: NCBI BLink). & (gnl|cdd|87049 : 111.0) no description available & (gnl|cdd|38433 : 102.0) no description available & (reliability: 338.0) & (original description: Putative BnaA07g38860D, Description = BnaA07g38860D protein, PFAM = PF06244)' T '35.2' 'not assigned.unknown' 'niben101scf01491_275101-279081' '(at1g76980 : 114.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1); Has 61 Blast hits to 61 proteins in 18 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 2; Plants - 40; Viruses - 3; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative , Description = Putative hybrid signal transduction histidine kinase K-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01494_205035-206555' ' no hits & (original description: Putative orf116, Description = ORF270/2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01494_213872-219857' '(at1g10522 : 97.1) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative At1g10522, Description = At1g10522, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01494_503362-508514' '(at1g24095 : 222.0) Putative thiol-disulphide oxidoreductase DCC; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Putative thiol-disulphide oxidoreductase DCC (InterPro:IPR007263); BEST Arabidopsis thaliana protein match is: Putative thiol-disulphide oxidoreductase DCC (TAIR:AT1G52590.1). & (gnl|cdd|32828 : 101.0) no description available & (reliability: 444.0) & (original description: Putative PHYPADRAFT_18248, Description = Predicted protein, PFAM = PF04134)' T '35.2' 'not assigned.unknown' 'niben101scf01494_652007-655058' ' no hits & (original description: Putative geg, Description = Gibberellin-regulated family protein, PFAM = PF02704)' T '35.2' 'not assigned.unknown' 'niben101scf01494_1052668-1060302' ' no hits & (original description: Putative , Description = Sterile alpha motif domain-containing protein isoform 1, PFAM = PF00536)' T '35.2' 'not assigned.unknown' 'niben101scf01495_41536-48008' '(gnl|cdd|69644 : 356.0) no description available & (at5g59790 : 281.0) CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF966 (InterPro:IPR010369), Uncharacterised conserved protein UCP031043 (InterPro:IPR021182); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF966) (TAIR:AT3G46110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 562.0) & (original description: Putative At3g46110, Description = At3g46110, PFAM = PF06136)' T '35.2' 'not assigned.unknown' 'niben101scf01496_53271-58375' '(at5g01470 : 355.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 710.0) & (original description: Putative At5g01470, Description = S-adenosyl-L-methionine-dependent methyltransferase family protein, PFAM = PF10294)' T '35.2' 'not assigned.unknown' 'niben101scf01497_326293-329087' '(at4g35690 : 135.0) Arabidopsis protein of unknown function (DUF241); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT4G35710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66742 : 116.0) no description available & (reliability: 270.0) & (original description: Putative PGSC0003DMG400001539, Description = DUF241 domain protein, PFAM = PF03087)' T '35.2' 'not assigned.unknown' 'niben101scf01497_329772-332158' '(at4g35690 : 89.0) Arabidopsis protein of unknown function (DUF241); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT4G35710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative PGSC0003DMG400001539, Description = DUF241 domain protein, PFAM = PF03087)' T '35.2' 'not assigned.unknown' 'niben101scf01497_331250-333649' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01497_371677-374630' '(gnl|cdd|66742 : 155.0) no description available & (at4g35720 : 154.0) Arabidopsis protein of unknown function (DUF241); EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT4G35690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative PGSC0003DMG400001543, Description = , PFAM = PF03087)' T '35.2' 'not assigned.unknown' 'niben101scf01498_232835-235596' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01498_640039-642634' ' no hits & (original description: Putative PGSC0003DMG400025060, Description = , PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'niben101scf01498_1268822-1272450' ' no hits & (original description: Putative umc1712, Description = At1g22630/F12K8_2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01500_114376-119159' ' no hits & (original description: Putative PGSC0003DMG400026237, Description = Transmembrane protein, putative, PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben101scf01500_303897-306746' ' no hits & (original description: Putative , Description = , PFAM = PF07797)' T '35.2' 'not assigned.unknown' 'niben101scf01502_75997-79559' '(at3g03570 : 138.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP013022 (InterPro:IPR016607); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3550/UPF0682) (TAIR:AT4G40050.1); Has 215 Blast hits to 210 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative At3g03570, Description = Signal transducer, putative, PFAM = PF12070)' T '35.2' 'not assigned.unknown' 'niben101scf01502_337344-352180' '(gnl|cdd|37246 : 185.0) no description available & (at5g27740 : 169.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 2775 (EMB2775); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp-loader complex, subunit E, C-terminal (InterPro:IPR019483), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921); BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA) (TAIR:AT1G21690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|80670 : 100.0) no description available & (reliability: 338.0) & (original description: Putative TCM_016678, Description = ATPase family associated with various cellular activities, putative isoform 1, PFAM = PF13177)' T '35.2' 'not assigned.unknown' 'niben101scf01502_348868-351686' ' no hits & (original description: Putative , Description = DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01506_411945-414754' '(at5g28150 : 352.0) Plant protein of unknown function (DUF868); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT3G04860.1); Has 292 Blast hits to 290 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 292; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69434 : 291.0) no description available & (reliability: 704.0) & (original description: Putative BnaA09g51660D, Description = BnaA09g51660D protein, PFAM = PF05910)' T '35.2' 'not assigned.unknown' 'niben101scf01512_70508-74132' ' no hits & (original description: Putative KEA4, Description = Potassium efflux antiporter, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01513_24219-33328' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01513_31827-34701' '(at2g04039 : 175.0) unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 38 Blast hits to 38 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative PGSC0003DMG400020288, Description = DUF2996 family protein, PFAM = PF11210)' T '35.2' 'not assigned.unknown' 'niben101scf01513_201906-205482' ' no hits & (original description: Putative PGSC0003DMG400006509, Description = Putative ovule protein, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf01514_519738-522047' ' no hits & (original description: Putative PGSC0003DMG400007262, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01517_64772-68229' '(at3g19340 : 665.0) LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3754 (InterPro:IPR022227); BEST Arabidopsis thaliana protein match is: aminopeptidases (TAIR:AT5G13940.1); Has 308 Blast hits to 303 proteins in 113 species: Archae - 0; Bacteria - 164; Metazoa - 10; Fungi - 0; Plants - 111; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 1330.0) & (original description: Putative At3g19340, Description = Putative uncharacterized protein At3g19340, PFAM = PF12576)' T '35.2' 'not assigned.unknown' 'niben101scf01517_673407-676225' ' no hits & (original description: Putative pol, Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf01517_769002-772946' '(at2g33180 : 128.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative At2g33180, Description = BnaA04g19200D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01518_137374-140150' '(at1g25400 : 90.1) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68440.1). & (reliability: 180.2) & (original description: Putative PGSC0003DMG400005982, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01518_333637-336682' '(at1g68490 : 103.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01520_600552-603629' ' no hits & (original description: Putative , Description = Putative ATP-dependent (S)-NAD(P)H-hydrate dehydratase-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01520_604276-606458' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01520_660310-665443' '(at5g19160 : 525.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 11 (TBL11); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT3G06080.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|72785 : 84.3) no description available & (reliability: 1050.0) & (original description: Putative TBL11, Description = Protein trichome birefringence-like 11, PFAM = PF14416;PF13839;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf01520_734310-741703' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01521_93321-96351' ' no hits & (original description: Putative SKU6, Description = Protein SPIRAL1-like 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01521_385637-416638' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01521_684137-687142' '(at1g10380 : 285.0) Putative membrane lipoprotein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 280 Blast hits to 279 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 280; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 570.0) & (original description: Putative At1g10380, Description = At1g10380/F14N23_32, PFAM = PF13947)' T '35.2' 'not assigned.unknown' 'niben101scf01521_1068263-1073541' ' no hits & (original description: Putative , Description = , PFAM = PF08387)' T '35.2' 'not assigned.unknown' 'niben101scf01521_1136547-1139550' ' no hits & (original description: Putative PGSC0003DMG400014583, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01521_1139731-1142141' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf01521_1630484-1633062' '(at1g14345 : 219.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); Has 297 Blast hits to 297 proteins in 86 species: Archae - 0; Bacteria - 121; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative rnpA, Description = Ribonuclease P, PFAM = PF03703)' T '35.2' 'not assigned.unknown' 'niben101scf01523_108230-113073' '(at4g00910 : 447.0) Aluminium activated malate transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to aluminum ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: sepal, root, pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G08440.1); Has 1015 Blast hits to 1014 proteins in 357 species: Archae - 0; Bacteria - 624; Metazoa - 0; Fungi - 16; Plants - 351; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|39909 : 340.0) no description available & (gnl|cdd|85194 : 169.0) no description available & (reliability: 894.0) & (original description: Putative ALMT10, Description = Aluminum-activated malate transporter 10, PFAM = PF11744)' T '35.2' 'not assigned.unknown' 'niben101scf01526_529011-531471' ' no hits & (original description: Putative LEA1, Description = LEA, PFAM = PF03760)' T '35.2' 'not assigned.unknown' 'niben101scf01526_560276-565103' '(at4g17960 : 129.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G46620.1); Has 46 Blast hits to 45 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative F383_13537, Description = Putative phospholipid hydroperoxide glutathione peroxidase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01526_581760-589775' '(at2g38695 : 205.0) unknown protein; Has 56 Blast hits to 54 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 410.0) & (original description: Putative BnaC03g21550D, Description = BnaC03g21550D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01529_93046-95291' ' no hits & (original description: Putative , Description = , PFAM = PF12609)' T '35.2' 'not assigned.unknown' 'niben101scf01534_71116-78371' '(at3g04780 : 303.0) Encodes a protein with little sequence identity with any other protein of known structure or function. Part of this protein shows a 42% sequence identity with the C-terminal domain of the 32-kD human thioredoxin-like protein.; CONTAINS InterPro DOMAIN/s: Thioredoxin, core (InterPro:IPR015467), Proteasome-interacting thioredoxin-like domain, C-terminal (InterPro:IPR010400); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1000) (TAIR:AT2G25950.1); Has 606 Blast hits to 606 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 245; Fungi - 186; Plants - 75; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink). & (gnl|cdd|36126 : 207.0) no description available & (gnl|cdd|87041 : 124.0) no description available & (reliability: 606.0) & (original description: Putative At3g04780, Description = PITH domain-containing protein At3g04780, PFAM = PF06201)' T '35.2' 'not assigned.unknown' 'niben101scf01534_81872-85921' '(at4g14746 : 126.0) CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); Has 259 Blast hits to 234 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative PGSC0003DMG400019429, Description = MtN26, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01534_95367-99150' ' no hits & (original description: Putative , Description = IQ-domain 21, putative isoform 1, PFAM = PF13178;PF00612;PF00612)' T '35.2' 'not assigned.unknown' 'niben101scf01534_214443-275840' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01534_274066-276470' ' no hits & (original description: Putative PGSC0003DMG400019445, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01534_275841-291344' '(at3g04820 : 823.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, TruD (InterPro:IPR001656), Pseudouridine synthase TruD, eukaryotic (InterPro:IPR017091), Pseudouridine synthase, TruD, insertion domain (InterPro:IPR011760); Has 2276 Blast hits to 2198 proteins in 933 species: Archae - 260; Bacteria - 1262; Metazoa - 203; Fungi - 153; Plants - 61; Viruses - 0; Other Eukaryotes - 337 (source: NCBI BLink). & (gnl|cdd|37550 : 548.0) no description available & (gnl|cdd|73316 : 344.0) no description available & (reliability: 1646.0) & (original description: Putative At3g04820, Description = Pseudouridine synthase, PFAM = PF01142)' T '35.2' 'not assigned.unknown' 'niben101scf01534_482970-534061' ' no hits & (original description: Putative Dif54, Description = Extensin-like protein Dif54, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01534_551132-566015' '(at3g04830 : 466.0) Protein prenylyltransferase superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Protein prenylyltransferase superfamily protein (TAIR:AT5G28220.1); Has 523 Blast hits to 519 proteins in 216 species: Archae - 31; Bacteria - 43; Metazoa - 200; Fungi - 109; Plants - 58; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (gnl|cdd|38270 : 304.0) no description available & (reliability: 932.0) & (original description: Putative PGSC0003DMG400022512, Description = O-linked GlcNAc transferase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01535_181228-183842' '(at5g55710 : 214.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein ycf60 (TAIR:AT2G47840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative BnaC03g14110D, Description = BnaC03g14110D protein, PFAM = PF16166)' T '35.2' 'not assigned.unknown' 'niben101scf01537_453415-467207' '(at3g17900 : 705.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 45 Blast hits to 44 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 39; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 1410.0) & (original description: Putative BnaC06g07210D, Description = BnaC06g07210D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01538_421981-426736' ' no hits & (original description: Putative PGSC0003DMG400031126, Description = , PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'niben101scf01538_424380-426748' ' no hits & (original description: Putative PGSC0003DMG400031126, Description = , PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'niben101scf01539_84685-87251' '(at1g79770 : 130.0) Protein of unknown function (DUF1677); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1677, plant (InterPro:IPR012876); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1677) (TAIR:AT5G25840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71349 : 124.0) no description available & (reliability: 260.0) & (original description: Putative BnaC06g18890D, Description = CASP-like protein, PFAM = PF07911)' T '35.2' 'not assigned.unknown' 'niben101scf01539_150748-157502' '(at1g52140 : 102.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative PGSC0003DMG400000363, Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben101scf01545_83570-97815' '(at2g25605 : 276.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 75 Blast hits to 75 proteins in 20 species: Archae - 2; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 552.0) & (original description: Putative TCM_038354, Description = DNA-directed RNA polymerase subunit beta, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01545_103601-118871' ' no hits & (original description: Putative Ccrd_009956, Description = Barwin-like endoglucanase, PFAM = PF03330)' T '35.2' 'not assigned.unknown' 'niben101scf01545_116156-174581' ' no hits & (original description: Putative PGSC0003DMG400007384, Description = EG45-like domain containing protein, PFAM = PF03330)' T '35.2' 'not assigned.unknown' 'niben101scf01548_31691-38426' '(at3g07760 : 219.0) Sterile alpha motif (SAM) domain-containing protein; CONTAINS InterPro DOMAIN/s: Sterile alpha motif (InterPro:IPR001660), Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 2 (InterPro:IPR011510); Has 60 Blast hits to 60 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 6; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative , Description = , PFAM = PF07647)' T '35.2' 'not assigned.unknown' 'niben101scf01548_37877-40801' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01552_671385-674877' ' no hits & (original description: Putative BnaA06g05550D, Description = BnaA06g05550D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01555_138148-143006' '(at4g14600 : 175.0) Target SNARE coiled-coil domain protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: Target SNARE coiled-coil domain protein (TAIR:AT1G29060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative SFT1, Description = Target SNARE coiled-coil domain protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01556_378064-383009' '(at3g20300 : 481.0) Protein of unknown function (DUF3537); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3537 (InterPro:IPR021924); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3537) (TAIR:AT1G50630.1); Has 143 Blast hits to 143 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 962.0) & (original description: Putative MRB1, Description = Putative uncharacterized protein At4g22270, PFAM = PF12056)' T '35.2' 'not assigned.unknown' 'niben101scf01556_388438-393255' ' no hits & (original description: Putative PGSC0003DMG400045247, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01557_493781-519350' '(at1g08390 : 136.0) unknown protein; Has 62 Blast hits to 62 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 34; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative , Description = , PFAM = PF16100)' T '35.2' 'not assigned.unknown' 'niben101scf01559_84025-86988' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01559_213590-222379' '(at4g38260 : 294.0) Protein of unknown function (DUF833); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF833 (InterPro:IPR008551); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF833) (TAIR:AT1G20680.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86939 : 201.0) no description available & (gnl|cdd|37553 : 188.0) no description available & (reliability: 588.0) & (original description: Putative glysoja_029514, Description = Ser/Thr-rich protein T10 in DGCR region, PFAM = PF05742)' T '35.2' 'not assigned.unknown' 'niben101scf01563_175535-180462' '(at3g60410 : 87.0) Protein of unknown function (DUF1639); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1639 (InterPro:IPR012438); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1639) (TAIR:AT1G25370.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative , Description = , PFAM = PF07797)' T '35.2' 'not assigned.unknown' 'niben101scf01563_367051-385170' '(at2g35680 : 353.0) Phosphotyrosine protein phosphatases superfamily protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, protein tyrosine/serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: Phosphotyrosine protein phosphatases superfamily protein (TAIR:AT5G56610.1); Has 1976 Blast hits to 1976 proteins in 288 species: Archae - 41; Bacteria - 150; Metazoa - 1097; Fungi - 157; Plants - 204; Viruses - 23; Other Eukaryotes - 304 (source: NCBI BLink). & (gnl|cdd|36931 : 251.0) no description available & (gnl|cdd|29029 : 84.1) no description available & (reliability: 706.0) & (original description: Putative DSP8, Description = Putative dual specificity protein phosphatase DSP8, PFAM = PF00782)' T '35.2' 'not assigned.unknown' 'niben101scf01568_184565-206063' '(at5g25270 : 310.0) Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT5G42220.1); Has 11489 Blast hits to 5746 proteins in 742 species: Archae - 0; Bacteria - 401; Metazoa - 4954; Fungi - 1390; Plants - 2430; Viruses - 186; Other Eukaryotes - 2128 (source: NCBI BLink). & (gnl|cdd|39449 : 140.0) no description available & (gnl|cdd|29211 : 104.0) no description available & (reliability: 620.0) & (original description: Putative , Description = Ubiquitin-like superfamily protein, putative isoform 1, PFAM = PF00240)' T '35.2' 'not assigned.unknown' 'niben101scf01574_429074-431253' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01576_128416-153842' '(at5g35180 : 907.0) FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769), Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: ENHANCED DISEASE RESISTANCE 2 (TAIR:AT4G19040.1); Has 454 Blast hits to 426 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 378; Viruses - 2; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|70520 : 243.0) no description available & (reliability: 1814.0) & (original description: Putative At5g35180, Description = AT5G35180 protein, PFAM = PF07059;PF01852)' T '35.2' 'not assigned.unknown' 'niben101scf01576_330906-334876' '(at5g35160 : 1118.0) Endomembrane protein 70 protein family; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT4G12650.1). & (gnl|cdd|36492 : 747.0) no description available & (gnl|cdd|66650 : 556.0) no description available & (reliability: 2236.0) & (original description: Putative TMN11, Description = Transmembrane 9 superfamily member 11, PFAM = PF02990)' T '35.2' 'not assigned.unknown' 'niben101scf01576_389703-392041' ' no hits & (original description: Putative Ccrd_024156, Description = Zinc finger, SWIM-type, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01577_96047-103651' '(at1g69935 : 108.0) Encodes a nuclear localized serine-arginine-aspartate-rich protein that acts as a negative regulator of photomorphogenesis.; SHORT HYPOCOTYL IN WHITE LIGHT1 (SHW1); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G33780.1); Has 40 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative SHW1, Description = Short hypocotyl in white light1 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01578_143511-149788' '(at3g19870 : 961.0) unknown protein; Has 84 Blast hits to 64 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (reliability: 1922.0) & (original description: Putative Sb04g038250, Description = Putative uncharacterized protein Sb04g038250, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01579_170276-178718' '(at5g59960 : 516.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1032.0) & (original description: Putative BnaA10g29610D, Description = BnaA10g29610D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01580_506176-510695' ' (original description: Putative ODC, Description = Ornithine decarboxylase, PFAM = PF00278;PF02784)' T '35.2' 'not assigned.unknown' 'niben101scf01582_374057-378968' '(at1g70750 : 254.0) Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT5G16720.1); Has 8718 Blast hits to 6591 proteins in 581 species: Archae - 113; Bacteria - 587; Metazoa - 3699; Fungi - 664; Plants - 753; Viruses - 66; Other Eukaryotes - 2836 (source: NCBI BLink). & (gnl|cdd|68159 : 117.0) no description available & (reliability: 508.0) & (original description: Putative Os03g0708700, Description = Os03g0708700 protein, PFAM = PF04576)' T '35.2' 'not assigned.unknown' 'niben101scf01584_10514-17164' '(gnl|cdd|69589 : 340.0) no description available & (at2g31920 : 277.0) Plant protein of unknown function (DUF936); LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF936, plant (InterPro:IPR010341); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF936) (TAIR:AT1G23790.1); Has 236 Blast hits to 171 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 236; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 554.0) & (original description: Putative MTR_2g062300, Description = DUF936 family protein, PFAM = PF06075;PF06075)' T '35.2' 'not assigned.unknown' 'niben101scf01584_16736-25495' '(at1g05577 : 229.0) CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF966 (InterPro:IPR010369), Uncharacterised conserved protein UCP031043 (InterPro:IPR021182); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF966) (TAIR:AT5G59790.1); Has 167 Blast hits to 166 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 166; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|69644 : 105.0) no description available & (reliability: 458.0) & (original description: Putative LOC100272305, Description = , PFAM = PF06136)' T '35.2' 'not assigned.unknown' 'niben101scf01584_17165-23706' '(at1g05577 : 225.0) CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF966 (InterPro:IPR010369), Uncharacterised conserved protein UCP031043 (InterPro:IPR021182); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF966) (TAIR:AT5G59790.1); Has 167 Blast hits to 166 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 166; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|69644 : 110.0) no description available & (reliability: 450.0) & (original description: Putative LOC100272305, Description = , PFAM = PF06136)' T '35.2' 'not assigned.unknown' 'niben101scf01587_393443-398624' '(at3g19900 : 231.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3067 (InterPro:IPR021420); Has 276 Blast hits to 276 proteins in 83 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 2; Plants - 59; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative BnaA05g19280D, Description = BnaA05g19280D protein, PFAM = PF11267)' T '35.2' 'not assigned.unknown' 'niben101scf01589_68794-73118' '(at2g41640 : 570.0) Glycosyltransferase family 61 protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyltransferase AER61, uncharacterised (InterPro:IPR007657); BEST Arabidopsis thaliana protein match is: Glycosyltransferase family 61 protein (TAIR:AT3G57380.1). & (gnl|cdd|39896 : 395.0) no description available & (gnl|cdd|68160 : 292.0) no description available & (reliability: 1140.0) & (original description: Putative a1, Description = Glycosyltransferase, PFAM = PF04577)' T '35.2' 'not assigned.unknown' 'niben101scf01593_433802-474410' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01594_208851-214270' ' no hits & (original description: Putative PGSC0003DMG400023323, Description = Arginine/serine-rich coiled coil protein, putative, PFAM = PF15346)' T '35.2' 'not assigned.unknown' 'niben101scf01594_589564-596461' '(at5g20680 : 532.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 16; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 14 (TAIR:AT5G64020.1); Has 1636 Blast hits to 1561 proteins in 93 species: Archae - 0; Bacteria - 11; Metazoa - 58; Fungi - 27; Plants - 1333; Viruses - 7; Other Eukaryotes - 200 (source: NCBI BLink). & (gnl|cdd|72785 : 133.0) no description available & (reliability: 1064.0) & (original description: Putative TBL14, Description = Protein trichome birefringence-like 14, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf01594_597622-601197' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01596_408406-447782' ' no hits & (original description: Putative PGSC0003DMG400023207, Description = , PFAM = PF13963)' T '35.2' 'not assigned.unknown' 'niben101scf01596_445278-448093' ' (original description: Putative Tdv1, Description = Transposon protein, putative, CACTA, En/Spm sub-class, PFAM = PF02992)' T '35.2' 'not assigned.unknown' 'niben101scf01596_851709-856722' '(at5g51020 : 404.0) Encodes CRL (CRUMPLED LEAF), a protein localized in the outer envelope membrane of plastids. Mutation in this gene affects the pattern of cell division, cell differentiation and plastid division.; CRUMPLED LEAF (CRL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1001 (InterPro:IPR010404); Has 109 Blast hits to 109 proteins in 37 species: Archae - 0; Bacteria - 64; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 808.0) & (original description: Putative CRL, Description = Chromophore lyase CRL, chloroplastic, PFAM = PF06206)' T '35.2' 'not assigned.unknown' 'niben101scf01596_957905-961242' '(at3g23760 : 210.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: transferases, transferring glycosyl groups (TAIR:AT4G14100.1); Has 108 Blast hits to 104 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 420.0) & (original description: Putative dl3085w, Description = Transferring glycosyl group transferase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01596_978992-983532' '(gnl|cdd|71153 : 530.0) no description available & (at5g61820 : 467.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Stress up-regulated Nod 19 (InterPro:IPR011692); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 934.0) & (original description: Putative MtN19, Description = MtN19 protein, PFAM = PF07712)' T '35.2' 'not assigned.unknown' 'niben101scf01602_615859-619412' '(at1g27330 : 108.0) Ribosome associated membrane protein RAMP4; CONTAINS InterPro DOMAIN/s: Ribosome associated membrane RAMP4 (InterPro:IPR010580); BEST Arabidopsis thaliana protein match is: Ribosome associated membrane protein RAMP4 (TAIR:AT1G27350.1); Has 348 Blast hits to 348 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 210; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|38701 : 92.3) no description available & (gnl|cdd|87119 : 84.6) no description available & (reliability: 216.0) & (original description: Putative At1g27330, Description = Endoplasmic reticulum, stress-associated Ramp4, PFAM = PF06624)' T '35.2' 'not assigned.unknown' 'niben101scf01606_12024-14374' ' no hits & (original description: Putative LSU2, Description = At5g24660, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01606_198127-200561' '(at3g49550 : 211.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24610.1); Has 55 Blast hits to 55 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative glysoja_046468, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01607_95283-99088' ' no hits & (original description: Putative , Description = , PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf01607_452572-455111' ' no hits & (original description: Putative PGSC0003DMG400007828, Description = , PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf01607_646533-651292' '(at2g31130 : 97.1) unknown protein; Has 116 Blast hits to 113 proteins in 44 species: Archae - 0; Bacteria - 3; Metazoa - 21; Fungi - 2; Plants - 40; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative PGSC0003DMG400020429, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01609_38921-46791' '(at2g47300 : 607.0) ribonuclease Ps; FUNCTIONS IN: ribonuclease P activity; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, sperm cell, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: POPLD (InterPro:IPR012590); Has 176 Blast hits to 168 proteins in 87 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 69; Plants - 36; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|70445 : 122.0) no description available & (gnl|cdd|38532 : 86.2) no description available & (reliability: 1214.0) & (original description: Putative pop1, Description = POP1 protein, PFAM = PF08170;PF06978)' T '35.2' 'not assigned.unknown' 'niben101scf01615_171632-177538' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01616_60859-62987' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01620_289862-292812' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01623_604587-612836' '(gnl|cdd|69161 : 302.0) no description available & (at4g16100 : 265.0) Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT5G49220.1); Has 347 Blast hits to 341 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2; Plants - 319; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 530.0) & (original description: Putative BnaA03g42340D, Description = BnaA03g42340D protein, PFAM = PF05623)' T '35.2' 'not assigned.unknown' 'niben101scf01623_848986-851468' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01623_891378-894544' '(at1g02700 : 153.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02140.1); Has 49 Blast hits to 49 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 6; Plants - 29; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01623_942551-945085' ' no hits & (original description: Putative GNC, Description = GATA transcription factor 15, PFAM = PF00320)' T '35.2' 'not assigned.unknown' 'niben101scf01623_962205-966380' '(at4g13030 : 117.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative RCOM_1348180, Description = ATP binding protein, putative, PFAM = PF01926)' T '35.2' 'not assigned.unknown' 'niben101scf01623_1040409-1042602' ' no hits & (original description: Putative , Description = , PFAM = PF12023)' T '35.2' 'not assigned.unknown' 'niben101scf01623_1042603-1045453' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01623_1076466-1079074' '(at5g38700 : 146.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02170.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative , Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben101scf01623_1109086-1111682' '(at5g38700 : 122.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02170.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative , Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben101scf01623_1195123-1201606' '(at2g25920 : 164.0) BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein (TAIR:AT2G25910.2); Has 131 Blast hits to 125 proteins in 54 species: Archae - 0; Bacteria - 50; Metazoa - 12; Fungi - 12; Plants - 41; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative , Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01623_1429535-1435586' '(at3g62580 : 313.0) Late embryogenesis abundant protein (LEA) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: late embryogenesis abundant domain-containing protein / LEA domain-containing protein (TAIR:AT1G72100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38097 : 112.0) no description available & (reliability: 626.0) & (original description: Putative LEA, Description = Late embryogenesis abundant protein, PFAM = PF13664)' T '35.2' 'not assigned.unknown' 'niben101scf01625_273244-278012' ' no hits & (original description: Putative At1g01150, Description = BnaA06g30300D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01626_314524-316672' '(at5g65520 : 142.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative At5g65520, Description = Putative uncharacterized protein At5g65520, PFAM = PF13181)' T '35.2' 'not assigned.unknown' 'niben101scf01627_141237-143374' ' no hits & (original description: Putative DVL6, Description = DVL6, PFAM = PF08137)' T '35.2' 'not assigned.unknown' 'niben101scf01633_12148-20032' '(at4g29590 : 410.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G01660.1); Has 1031 Blast hits to 1031 proteins in 322 species: Archae - 24; Bacteria - 646; Metazoa - 0; Fungi - 12; Plants - 95; Viruses - 0; Other Eukaryotes - 254 (source: NCBI BLink). & (reliability: 820.0) & (original description: Putative ubiE, Description = Ubiquinone/menaquinone biosynthesis methyltransferase, PFAM = PF08241)' T '35.2' 'not assigned.unknown' 'niben101scf01633_47785-50317' ' (original description: Putative KK1_013771, Description = PRA1 family protein F2, PFAM = PF03208)' T '35.2' 'not assigned.unknown' 'niben101scf01634_396975-410542' '(at3g57280 : 215.0) Transmembrane proteins 14C; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0136, Transmembrane (InterPro:IPR005349); BEST Arabidopsis thaliana protein match is: Transmembrane proteins 14C (TAIR:AT3G20510.1); Has 169 Blast hits to 169 proteins in 36 species: Archae - 0; Bacteria - 2; Metazoa - 27; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|39468 : 86.9) no description available & (reliability: 430.0) & (original description: Putative FAX1, Description = Protein FATTY ACID EXPORT 1, chloroplastic, PFAM = PF03647)' T '35.2' 'not assigned.unknown' 'niben101scf01634_653756-660938' ' no hits & (original description: Putative BnaCnng07480D, Description = BnaCnng07480D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01634_714633-737894' '(at2g41600 : 171.0) Mitochondrial glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrial matrix; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: Mitochondrial glycoprotein family protein (TAIR:AT1G80720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative At2g41600, Description = Glycoprotein family protein, PFAM = PF02330)' T '35.2' 'not assigned.unknown' 'niben101scf01635_403902-406366' ' no hits & (original description: Putative GDU2, Description = Protein GLUTAMINE DUMPER 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01638_35899-42704' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01640_64382-66927' '(at3g03280 : 147.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17350.1); Has 137 Blast hits to 137 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative , Description = , PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf01640_90227-92845' ' no hits & (original description: Putative PGSC0003DMG400030637, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01642_355444-358783' ' no hits & (original description: Putative BnaC02g26490D, Description = BnaC02g26490D protein, PFAM = PF08524)' T '35.2' 'not assigned.unknown' 'niben101scf01643_36185-43461' '(at1g47900 : 645.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053), Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G19835.2). & (gnl|cdd|72813 : 255.0) no description available & (reliability: 1290.0) & (original description: Putative FPP6, Description = Filament-like plant protein 6, PFAM = PF05911)' T '35.2' 'not assigned.unknown' 'niben101scf01650_75915-81740' '(at3g20490 : 194.0) unknown protein; Has 754 Blast hits to 165 proteins in 64 species: Archae - 0; Bacteria - 48; Metazoa - 26; Fungi - 25; Plants - 36; Viruses - 0; Other Eukaryotes - 619 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01650_82815-89755' ' no hits & (original description: Putative , Description = , PFAM = PF02902)' T '35.2' 'not assigned.unknown' 'niben101scf01655_204975-210882' '(at3g61320 : 492.0) Bestrophin-like protein; CONTAINS InterPro DOMAIN/s: Bestrophin-like (InterPro:IPR021134); BEST Arabidopsis thaliana protein match is: Bestrophin-like protein (TAIR:AT2G45870.1); Has 1448 Blast hits to 1447 proteins in 512 species: Archae - 0; Bacteria - 1140; Metazoa - 0; Fungi - 113; Plants - 120; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|68809 : 272.0) no description available & (reliability: 984.0) & (original description: Putative At3g61320, Description = UPF0187 protein At3g61320, chloroplastic, PFAM = PF01062)' T '35.2' 'not assigned.unknown' 'niben101scf01655_381680-394596' '(gnl|cdd|69222 : 577.0) no description available & (at2g45830 : 545.0) downstream target of AGL15 2 (DTA2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: stem, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF821) (TAIR:AT3G61270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37669 : 527.0) no description available & (reliability: 1090.0) & (original description: Putative DTA2, Description = Downstream target of AGL15 2, PFAM = PF05686)' T '35.2' 'not assigned.unknown' 'niben101scf01655_382881-388542' '(gnl|cdd|69222 : 579.0) no description available & (at2g45830 : 539.0) downstream target of AGL15 2 (DTA2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: stem, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF821) (TAIR:AT3G61270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37669 : 532.0) no description available & (reliability: 1078.0) & (original description: Putative GT90A1, Description = Glycosyltransferase, CAZy family GT90, PFAM = PF05686)' T '35.2' 'not assigned.unknown' 'niben101scf01655_537708-541327' '(at2g46220 : 269.0) Uncharacterized conserved protein (DUF2358); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); BEST Arabidopsis thaliana protein match is: Uncharacterized conserved protein (DUF2358) (TAIR:AT1G16320.1); Has 199 Blast hits to 199 proteins in 64 species: Archae - 0; Bacteria - 74; Metazoa - 19; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37757 : 125.0) no description available & (reliability: 538.0) & (original description: Putative , Description = Wollemia nobilis Ref_Wollemi_Transcript_28887_1569 transcribed RNA sequence, PFAM = PF10184)' T '35.2' 'not assigned.unknown' 'niben101scf01660_12024-19047' '(at3g23740 : 115.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14120.1); Has 155 Blast hits to 130 proteins in 48 species: Archae - 0; Bacteria - 16; Metazoa - 19; Fungi - 48; Plants - 47; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative , Description = Uncharacterized protein isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01661_51514-59878' '(at5g27830 : 195.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Folate receptor, conserved region (InterPro:IPR018143). & (reliability: 390.0) & (original description: Putative PGSC0003DMG400024721, Description = BnaA06g28530D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01661_121045-126402' '(q8s1z1|utp11_orysa : 166.0) Probable U3 small nucleolar RNA-associated protein 11 (U3 snoRNA-associated protein 11) - Oryza sativa (Rice) & (at3g60360 : 155.0) EMBRYO SAC DEVELOPMENT ARREST 14 (EDA14); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: megagametogenesis; LOCATED IN: small-subunit processome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp11 (InterPro:IPR007144); Has 434 Blast hits to 428 proteins in 209 species: Archae - 4; Bacteria - 1; Metazoa - 127; Fungi - 141; Plants - 59; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|38447 : 131.0) no description available & (gnl|cdd|67607 : 127.0) no description available & (reliability: 310.0) & (original description: Putative UTP11, Description = U3 snoRNA-associated protein 11, PFAM = PF03998)' T '35.2' 'not assigned.unknown' 'niben101scf01661_172399-174860' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01661_320638-324657' ' no hits & (original description: Putative BnaC03g20450D, Description = BnaC03g20450D protein, PFAM = PF05699)' T '35.2' 'not assigned.unknown' 'niben101scf01663_21560-24276' ' (original description: Putative ERS, Description = AtOFP11, PFAM = PF04844)' T '35.2' 'not assigned.unknown' 'niben101scf01664_69164-76380' '(at4g35980 : 114.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01664_387015-391000' '(at4g35930 : 252.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G61340.1); Has 94 Blast hits to 94 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 504.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01664_557055-564492' '(at4g35920 : 234.0) Encodes an integral plasma membrane protein. Functionally complements the yeast mid1 mutant, a deficiency of Ca2+ influx. Involved in Ca2+ influx and mechanical sensing in roots. An over-expression line showed increased Ca2+ uptake than the wild type plant. The primary root of a knock-out mutant failed to penetrate a harder agar medium from a softer medium.; mid1-complementing activity 1 (MCA1); CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT2G17780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86720 : 81.9) no description available & (reliability: 468.0) & (original description: Putative MCA1, Description = Mid1-complementing activity 2, PFAM = PF04749)' T '35.2' 'not assigned.unknown' 'niben101scf01664_604349-606702' ' no hits & (original description: Putative PGSC0003DMG400003678, Description = Nucleic acid binding protein, putative, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf01664_615492-618652' ' no hits & (original description: Putative FDP, Description = bZIP transcription factor 27, PFAM = PF00170)' T '35.2' 'not assigned.unknown' 'niben101scf01671_612361-615207' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01678_436260-438625' ' no hits & (original description: Putative orf190, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01678_557167-563154' ' no hits & (original description: Putative Os03g0703300, Description = Os03g0703300 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01679_413940-417398' '(at2g32280 : 164.0) Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT4G21310.1); Has 170 Blast hits to 169 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative At2g32280, Description = At2g32280, PFAM = PF06749;PF06749)' T '35.2' 'not assigned.unknown' 'niben101scf01681_1017090-1028036' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01681_1078030-1084616' '(at5g67550 : 188.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71110.1); Has 161 Blast hits to 154 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative PGSC0003DMG400014614, Description = Os11g0264500 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01683_2920-5826' ' (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01683_426781-553703' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01683_1710192-1773485' '(at4g39420 : 3087.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; Has 20 Blast hits to 19 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|37095 : 1212.0) no description available & (reliability: 6174.0) & (original description: Putative , Description = , PFAM = PF14649)' T '35.2' 'not assigned.unknown' 'niben101scf01685_653403-656455' '(at5g06920 : 230.0) FASCICLIN-like arabinogalactan protein 21 precursor (FLA21); CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative FLA21, Description = Fasciclin-like arabinogalactan protein 21, PFAM = PF02469)' T '35.2' 'not assigned.unknown' 'niben101scf01687_128785-134940' '(at4g13200 : 92.8) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 97 Blast hits to 97 proteins in 46 species: Archae - 0; Bacteria - 65; Metazoa - 2; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 185.6) & (original description: Putative si707103b11b, Description = Uncharacterized protein At4g13200, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01687_236830-243087' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01687_461646-464342' ' no hits & (original description: Putative KNU, Description = EPF-type Cis2-His2 zinc finger transcription factor, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01687_1010820-1013916' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01688_65307-76852' '(at3g45880 : 405.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, root, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G19840.2); Has 1138 Blast hits to 1132 proteins in 270 species: Archae - 0; Bacteria - 266; Metazoa - 428; Fungi - 156; Plants - 146; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (gnl|cdd|37719 : 348.0) no description available & (reliability: 810.0) & (original description: Putative glysoja_003524, Description = JmjC domain-containing protein 7, PFAM = PF13621)' T '35.2' 'not assigned.unknown' 'niben101scf01693_48942-56494' '(at2g28130 : 427.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 854.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01693_74000-78862' '(at1g10660 : 270.0) unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 540.0) & (original description: Putative BnaA02g14930D, Description = BnaA02g14930D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01695_70964-73494' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01695_648843-651280' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01696_94027-120058' '(at3g04650 : 569.0) FAD/NAD(P)-binding oxidoreductase family protein; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT1G56000.1); Has 902 Blast hits to 899 proteins in 231 species: Archae - 14; Bacteria - 382; Metazoa - 7; Fungi - 2; Plants - 133; Viruses - 0; Other Eukaryotes - 364 (source: NCBI BLink). & (gnl|cdd|33187 : 167.0) no description available & (reliability: 1138.0) & (original description: Putative Os12g0597400, Description = Expressed protein, PFAM = PF13450)' T '35.2' 'not assigned.unknown' 'niben101scf01696_108020-110455' '(at3g04650 : 139.0) FAD/NAD(P)-binding oxidoreductase family protein; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT1G56000.1); Has 902 Blast hits to 899 proteins in 231 species: Archae - 14; Bacteria - 382; Metazoa - 7; Fungi - 2; Plants - 133; Viruses - 0; Other Eukaryotes - 364 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative At3g04650, Description = FAD/NAD(P)-binding oxidoreductase family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01696_373678-380836' '(at4g02550 : 321.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2). & (reliability: 642.0) & (original description: Putative PGSC0003DMG400019436, Description = Putative myb/SANT-like DNA-binding domain protein-like, PFAM = PF12776)' T '35.2' 'not assigned.unknown' 'niben101scf01697_462972-468014' '(at4g17790 : 358.0) SNARE associated Golgi protein family; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT1G71940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38350 : 224.0) no description available & (reliability: 716.0) & (original description: Putative gtk16, Description = Transmembrane protein 41B, PFAM = PF09335)' T '35.2' 'not assigned.unknown' 'niben101scf01697_1843041-1845412' '(at2g35290 : 97.8) unknown protein; Has 39 Blast hits to 39 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative PGSC0003DMG400043394, Description = Os03g0170100 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01702_60423-64448' '(at1g20225 : 216.0) Thioredoxin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G76020.1); Has 208 Blast hits to 204 proteins in 76 species: Archae - 0; Bacteria - 103; Metazoa - 14; Fungi - 6; Plants - 51; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative Os04g0227500, Description = OSJNBb0015G09.12 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01706_74108-81021' '(at4g27720 : 671.0) Major facilitator superfamily protein; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G49310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39533 : 671.0) no description available & (gnl|cdd|86904 : 555.0) no description available & (reliability: 1342.0) & (original description: Putative mfsd5, Description = Major facilitator superfamily domain-containing protein 5, PFAM = PF05631)' T '35.2' 'not assigned.unknown' 'niben101scf01710_518038-520952' ' no hits & (original description: Putative PGSC0003DMG400009028, Description = Protein FANTASTIC FOUR 3, PFAM = PF11250)' T '35.2' 'not assigned.unknown' 'niben101scf01716_93231-99163' '(at2g45980 : 171.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G00355.2); Has 93 Blast hits to 90 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative ATI1, Description = ATG8-interacting protein 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01717_59944-75392' '(at2g26200 : 715.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410), Methyltransferase type 12 (InterPro:IPR013217); BEST Arabidopsis thaliana protein match is: Methyltransferase family protein (TAIR:AT1G54650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37572 : 288.0) no description available & (reliability: 1430.0) & (original description: Putative METL6, Description = Methyltransferase-like protein, PFAM = PF08242;PF10294)' T '35.2' 'not assigned.unknown' 'niben101scf01718_192926-198068' '(at2g20930 : 245.0) SNARE-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, ER to Golgi vesicle-mediated transport; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sedlin (InterPro:IPR006722), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT1G80500.1); Has 516 Blast hits to 516 proteins in 166 species: Archae - 0; Bacteria - 0; Metazoa - 260; Fungi - 97; Plants - 87; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (gnl|cdd|38654 : 170.0) no description available & (gnl|cdd|86702 : 139.0) no description available & (reliability: 490.0) & (original description: Putative trappc2l, Description = Trafficking protein particle complex subunit 2-like protein, PFAM = PF04628)' T '35.2' 'not assigned.unknown' 'niben101scf01718_194158-197370' '(at2g20930 : 163.0) SNARE-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, ER to Golgi vesicle-mediated transport; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sedlin (InterPro:IPR006722), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT1G80500.1); Has 516 Blast hits to 516 proteins in 166 species: Archae - 0; Bacteria - 0; Metazoa - 260; Fungi - 97; Plants - 87; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (gnl|cdd|38654 : 103.0) no description available & (gnl|cdd|86702 : 100.0) no description available & (reliability: 326.0) & (original description: Putative trappc2l, Description = Trafficking protein particle complex subunit 2-like protein, PFAM = PF04628)' T '35.2' 'not assigned.unknown' 'niben101scf01718_514599-521331' '(at4g38500 : 728.0) Protein of unknown function (DUF616); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF616 (InterPro:IPR006852); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF616) (TAIR:AT1G28240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68342 : 425.0) no description available & (reliability: 1456.0) & (original description: Putative At4g38500, Description = AT4g38500/F20M13_60, PFAM = PF04765)' T '35.2' 'not assigned.unknown' 'niben101scf01718_989227-1005547' '(at4g38440 : 1099.0) LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II-associated protein 1, C-terminal (InterPro:IPR013929), RNA polymerase II-associated protein 1, N-terminal (InterPro:IPR013930); Has 276 Blast hits to 220 proteins in 102 species: Archae - 0; Bacteria - 2; Metazoa - 151; Fungi - 65; Plants - 41; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|39930 : 515.0) no description available & (reliability: 2198.0) & (original description: Putative BnaC04g32180D, Description = BnaC04g32180D protein, PFAM = PF08620;PF08621)' T '35.2' 'not assigned.unknown' 'niben101scf01719_243919-246515' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01719_422114-442973' '(at1g56260 : 122.0) unknown protein; Has 32 Blast hits to 32 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative TEN1, Description = CST complex subunit TEN1, PFAM = PF15490)' T '35.2' 'not assigned.unknown' 'niben101scf01721_588960-591334' ' no hits & (original description: Putative PGSC0003DMG400029430, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01721_907202-910846' ' no hits & (original description: Putative PGSC0003DMG400029280, Description = , PFAM = PF07839)' T '35.2' 'not assigned.unknown' 'niben101scf01722_293516-299987' '(at2g35820 : 251.0) ureidoglycolate hydrolases; FUNCTIONS IN: ureidoglycolate hydrolase activity; INVOLVED IN: allantoin catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ureidoglycolate hydrolase (InterPro:IPR007247); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35810.1); Has 155 Blast hits to 155 proteins in 53 species: Archae - 0; Bacteria - 64; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 502.0) & (original description: Putative all3023, Description = Ureidoglycolate hydrolase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01722_308422-428351' ' no hits & (original description: Putative PGSC0003DMG400009681, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01722_421772-435909' '(at5g51960 : 132.0) CONTAINS InterPro DOMAIN/s: Complex 1 LYR protein (InterPro:IPR008011); Has 45 Blast hits to 45 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative , Description = , PFAM = PF13233)' T '35.2' 'not assigned.unknown' 'niben101scf01727_146251-149609' '(at5g47900 : 516.0) Protein of unknown function (DUF1624); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1624 (InterPro:IPR012429); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1624) (TAIR:AT5G27730.1). & (gnl|cdd|39881 : 389.0) no description available & (gnl|cdd|34021 : 125.0) no description available & (reliability: 1032.0) & (original description: Putative Sb06g015200, Description = Putative uncharacterized protein Sb06g015200, PFAM = PF07786)' T '35.2' 'not assigned.unknown' 'niben101scf01729_24076-27120' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01729_27121-31903' '(at4g22830 : 182.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2499 (InterPro:IPR019634). & (reliability: 364.0) & (original description: Putative sll0608, Description = Ycf49-like protein, PFAM = PF10693)' T '35.2' 'not assigned.unknown' 'niben101scf01731_126911-129369' '(at1g12400 : 100.0) Nucleotide excision repair, TFIIH, subunit TTDA; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleotide-excision repair; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide excision repair, TFIIH, subunit TTDA (InterPro:IPR009400); BEST Arabidopsis thaliana protein match is: Nucleotide excision repair, TFIIH, subunit TTDA (TAIR:AT1G62886.1); Has 174 Blast hits to 174 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|38661 : 83.5) no description available & (gnl|cdd|87065 : 80.7) no description available & (reliability: 200.0) & (original description: Putative TFB5, Description = RNA polymerase II transcription factor B subunit 5, PFAM = PF06331)' T '35.2' 'not assigned.unknown' 'niben101scf01731_403448-407820' '(at2g27830 : 83.6) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits to 131 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01734_105993-127460' '(at4g12840 : 484.0) Protein of unknown function (DUF707); EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT4G18530.1); Has 319 Blast hits to 319 proteins in 27 species: Archae - 0; Bacteria - 13; Metazoa - 0; Fungi - 0; Plants - 303; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|68772 : 345.0) no description available & (reliability: 968.0) & (original description: Putative At4g12840, Description = At4g12840, PFAM = PF05212)' T '35.2' 'not assigned.unknown' 'niben101scf01734_163492-181752' '(at2g19270 : 117.0) CONTAINS InterPro DOMAIN/s: Mitotic checkpoint protein PRCC, C-terminal (InterPro:IPR018800); Has 930 Blast hits to 533 proteins in 146 species: Archae - 0; Bacteria - 18; Metazoa - 327; Fungi - 143; Plants - 61; Viruses - 0; Other Eukaryotes - 381 (source: NCBI BLink). & (gnl|cdd|39106 : 88.3) no description available & (reliability: 234.0) & (original description: Putative , Description = C-terminal, putative, PFAM = PF10253)' T '35.2' 'not assigned.unknown' 'niben101scf01738_207969-210304' '(at3g09085 : 157.0) Protein of unknown function (DUF962); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF962 (InterPro:IPR009305); Has 704 Blast hits to 704 proteins in 265 species: Archae - 0; Bacteria - 429; Metazoa - 0; Fungi - 2; Plants - 37; Viruses - 0; Other Eukaryotes - 236 (source: NCBI BLink). & (gnl|cdd|34045 : 81.9) no description available & (reliability: 314.0) & (original description: Putative At3g09085, Description = At3g09085, PFAM = PF06127)' T '35.2' 'not assigned.unknown' 'niben101scf01739_240127-242422' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01739_663580-665996' ' no hits & (original description: Putative At2g06320, Description = Retroelement pol polyprotein-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01739_850559-853215' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf01739_967068-975416' '(at4g20040 : 503.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G20050.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1006.0) & (original description: Putative QRT3, Description = Polygalacturonase QRT3, PFAM = PF12708)' T '35.2' 'not assigned.unknown' 'niben101scf01740_303407-330787' '(at5g52800 : 662.0) DNA primases; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DNA primase, UL52/UL70 type, Herpesviridae (InterPro:IPR004340); Has 201 Blast hits to 173 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 82; Fungi - 0; Plants - 45; Viruses - 8; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 1324.0) & (original description: Putative At5g52800, Description = DNA primase, PFAM = PF03121)' T '35.2' 'not assigned.unknown' 'niben101scf01740_811033-815614' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01740_999614-1006740' ' (original description: Putative ZOSMA_123G00390, Description = Protein SMG9, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01745_53771-56037' ' no hits & (original description: Putative DVL8, Description = DVL11, PFAM = PF08137)' T '35.2' 'not assigned.unknown' 'niben101scf01746_28460-31977' '(at5g10310 : 80.9) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative EPFL1, Description = 80A08_28, PFAM = PF17181)' T '35.2' 'not assigned.unknown' 'niben101scf01750_108894-112330' '(at5g22090 : 135.0) Protein of unknown function (DUF3049); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) (TAIR:AT4G02810.1). & (reliability: 270.0) & (original description: Putative , Description = , PFAM = PF11250)' T '35.2' 'not assigned.unknown' 'niben101scf01750_428240-432807' ' no hits & (original description: Putative , Description = Linker histone H1 and h5 family protein, PFAM = PF00538)' T '35.2' 'not assigned.unknown' 'niben101scf01750_837550-839885' ' no hits & (original description: Putative orf112b, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01750_1165239-1167562' ' no hits & (original description: Putative At3g11600, Description = Putative uncharacterized protein At3g11600, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01750_1250179-1253940' '(at3g11590 : 225.0) unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22310.1); Has 22320 Blast hits to 15179 proteins in 1213 species: Archae - 372; Bacteria - 2307; Metazoa - 10906; Fungi - 1700; Plants - 1146; Viruses - 65; Other Eukaryotes - 5824 (source: NCBI BLink). & (reliability: 450.0) & (original description: Putative At3g11590, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01752_15960-18469' '(gnl|cdd|68105 : 112.0) no description available & (at4g04630 : 108.0) Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT4G21970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative At2g34340, Description = At2g34340, PFAM = PF04520)' T '35.2' 'not assigned.unknown' 'niben101scf01756_13650-18503' '(at2g46230 : 332.0) PIN domain-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF652 (InterPro:IPR006984), Nucleotide binding protein, PINc (InterPro:IPR006596); BEST Arabidopsis thaliana protein match is: PIN domain-like family protein (TAIR:AT1G26530.1); Has 609 Blast hits to 609 proteins in 228 species: Archae - 22; Bacteria - 0; Metazoa - 231; Fungi - 162; Plants - 97; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|38375 : 313.0) no description available & (gnl|cdd|68473 : 173.0) no description available & (reliability: 664.0) & (original description: Putative fcf1, Description = MGC89599 protein, PFAM = PF04900)' T '35.2' 'not assigned.unknown' 'niben101scf01756_179831-184388' '(at2g46220 : 259.0) Uncharacterized conserved protein (DUF2358); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); BEST Arabidopsis thaliana protein match is: Uncharacterized conserved protein (DUF2358) (TAIR:AT1G16320.1); Has 199 Blast hits to 199 proteins in 64 species: Archae - 0; Bacteria - 74; Metazoa - 19; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37757 : 121.0) no description available & (reliability: 518.0) & (original description: Putative , Description = Wollemia nobilis Ref_Wollemi_Transcript_28887_1569 transcribed RNA sequence, PFAM = PF10184)' T '35.2' 'not assigned.unknown' 'niben101scf01756_390325-393831' '(at4g01240 : 630.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05390.1); Has 456 Blast hits to 442 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 455; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 1260.0) & (original description: Putative BnaC02g27670D, Description = BnaA02g36360D protein, PFAM = PF03141)' T '35.2' 'not assigned.unknown' 'niben101scf01758_34379-38936' '(at5g09960 : 95.5) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 191.0) & (original description: Putative At5g09960, Description = At5g09960, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01759_26539-29024' '(at5g60680 : 128.0) Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT3G45210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68105 : 114.0) no description available & (reliability: 256.0) & (original description: Putative glysoja_007963, Description = Actin cytoskeleton-regulatory complex protein end3, putative isoform 7, PFAM = PF04520)' T '35.2' 'not assigned.unknown' 'niben101scf01759_513275-516516' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01763_224186-230961' '(at5g26770 : 251.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05830.1); Has 26484 Blast hits to 16065 proteins in 1382 species: Archae - 343; Bacteria - 2653; Metazoa - 15273; Fungi - 2108; Plants - 1148; Viruses - 36; Other Eukaryotes - 4923 (source: NCBI BLink). & (reliability: 502.0) & (original description: Putative BnaC07g28570D, Description = BnaC07g28570D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01764_145084-147437' ' no hits & (original description: Putative PGSC0003DMG400041876, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01764_273336-276253' '(at1g23710 : 90.5) Protein of unknown function (DUF1645); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT1G70420.1); Has 288 Blast hits to 282 proteins in 52 species: Archae - 0; Bacteria - 6; Metazoa - 16; Fungi - 11; Plants - 191; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|71256 : 84.8) no description available & (reliability: 181.0) & (original description: Putative , Description = , PFAM = PF07816)' T '35.2' 'not assigned.unknown' 'niben101scf01765_421266-425704' '(at1g79260 : 208.0) CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1794 (InterPro:IPR014878); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87641 : 154.0) no description available & (gnl|cdd|38581 : 118.0) no description available & (reliability: 416.0) & (original description: Putative At1g79260, Description = UPF0678 fatty acid-binding protein-like protein At1g79260, PFAM = PF08768)' T '35.2' 'not assigned.unknown' 'niben101scf01767_352049-354651' ' (original description: Putative ERF1, Description = Ethylene response factor ERF1, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'niben101scf01771_108730-113809' '(at2g30350 : 249.0) Excinuclease ABC, C subunit, N-terminal; FUNCTIONS IN: nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Excinuclease ABC, C subunit, N-terminal (InterPro:IPR000305); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38215 : 154.0) no description available & (reliability: 498.0) & (original description: Putative PGSC0003DMG400020864, Description = Structure-specific endonuclease subunit SLX1 homolog, PFAM = PF01541)' T '35.2' 'not assigned.unknown' 'niben101scf01771_145177-151830' '(at5g47310 : 300.0) PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT4G17486.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35545 : 242.0) no description available & (gnl|cdd|69428 : 168.0) no description available & (reliability: 600.0) & (original description: Putative desi2, Description = DeSI-2, PFAM = PF05903)' T '35.2' 'not assigned.unknown' 'niben101scf01773_228751-233423' '(at1g02475 : 243.0) Polyketide cyclase/dehydrase and lipid transport superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis thaliana protein match is: Polyketide cyclase / dehydrase and lipid transport protein (TAIR:AT4G01883.1); Has 515 Blast hits to 515 proteins in 169 species: Archae - 0; Bacteria - 342; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink). & (gnl|cdd|35196 : 94.3) no description available & (reliability: 486.0) & (original description: Putative At4g01883, Description = Glycogen synthase kinase-3 like MsK-3, PFAM = PF03364)' T '35.2' 'not assigned.unknown' 'niben101scf01773_307205-312418' '(at4g01880 : 536.0) methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: tRNA processing; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type, TRM13 (InterPro:IPR021721), Methyltransferase TRM13 (InterPro:IPR007871); Has 320 Blast hits to 305 proteins in 140 species: Archae - 2; Bacteria - 9; Metazoa - 124; Fungi - 54; Plants - 43; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|38022 : 297.0) no description available & (gnl|cdd|68766 : 238.0) no description available & (reliability: 1072.0) & (original description: Putative BnaA03g26500D, Description = BnaA03g26500D protein, PFAM = PF05253;PF05206;PF11722)' T '35.2' 'not assigned.unknown' 'niben101scf01773_610484-616870' '(at2g47010 : 697.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17030.1); Has 72 Blast hits to 72 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 1394.0) & (original description: Putative BnaA05g00830D, Description = BnaA05g00830D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01774_276726-279643' ' no hits & (original description: Putative PGSC0003DMG400004941, Description = Phytosulfokines 3, putative, PFAM = PF06404)' T '35.2' 'not assigned.unknown' 'niben101scf01774_539310-542806' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01774_539322-542773' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01779_6363-12679' '(at3g49601 : 93.6) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf21 (InterPro:IPR013170); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative CG7971, Description = CG7971, isoform F, PFAM = PF08312)' T '35.2' 'not assigned.unknown' 'niben101scf01779_7025-10965' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01781_344646-351999' '(at2g28780 : 706.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF939, bacterial (InterPro:IPR010343); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09450.1); Has 671 Blast hits to 667 proteins in 305 species: Archae - 0; Bacteria - 588; Metazoa - 0; Fungi - 2; Plants - 66; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 1412.0) & (original description: Putative BnaC04g15380D, Description = BnaC04g15380D protein, PFAM = PF13515)' T '35.2' 'not assigned.unknown' 'niben101scf01782_47124-63791' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01782_57826-60655' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01782_343657-349682' '(at1g03250 : 306.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages. & (reliability: 612.0) & (original description: Putative BnaC05g01800D, Description = BnaC05g01800D protein, PFAM = PF01424;PF13902)' T '35.2' 'not assigned.unknown' 'niben101scf01782_768506-772947' '(gnl|cdd|39909 : 284.0) no description available & (at5g46600 : 246.0) Aluminium activated malate transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to aluminum ion; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT5G46610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85194 : 145.0) no description available & (reliability: 492.0) & (original description: Putative ALMT2, Description = Aluminum activated malate transporter family protein, PFAM = PF11744)' T '35.2' 'not assigned.unknown' 'niben101scf01784_669969-692515' '(at4g09680 : 174.0) Encodes CTC1 (Conserved Telomere Maintenance Component 1) involved in telomere maintenance.; conserved telomere maintenance component 1 (CTC1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: telomere maintenance; LOCATED IN: chromosome, telomeric region; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative PGSC0003DMG400031482, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01784_691108-694410' '(at4g09680 : 169.0) Encodes CTC1 (Conserved Telomere Maintenance Component 1) involved in telomere maintenance.; conserved telomere maintenance component 1 (CTC1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: telomere maintenance; LOCATED IN: chromosome, telomeric region; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative CTC1, Description = CST complex subunit CTC1, PFAM = PF15491)' T '35.2' 'not assigned.unknown' 'niben101scf01784_782995-792891' '(at1g47550 : 674.0) Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.; exocyst complex component sec3A (SEC3A); INVOLVED IN: biological_process unknown; LOCATED IN: exocyst; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Exocyst complex, component Exoc1 (InterPro:IPR019160); BEST Arabidopsis thaliana protein match is: exocyst complex component sec3B (TAIR:AT1G47560.1). & (gnl|cdd|37359 : 449.0) no description available & (reliability: 1348.0) & (original description: Putative SEC3A, Description = Exocyst complex component SEC3A, PFAM = PF09763)' T '35.2' 'not assigned.unknown' 'niben101scf01785_316064-318649' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01785_584315-587433' '(at1g29790 : 485.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G40830.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 970.0) & (original description: Putative At1g29790, Description = At1g29790, PFAM = PF03141)' T '35.2' 'not assigned.unknown' 'niben101scf01788_54960-77010' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01789_460537-469048' '(at5g58200 : 366.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843). & (reliability: 732.0) & (original description: Putative devT, Description = Alr4674 protein, PFAM = PF00149)' T '35.2' 'not assigned.unknown' 'niben101scf01789_490601-499673' '(at4g31020 : 448.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G24320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36765 : 324.0) no description available & (reliability: 896.0) & (original description: Putative hyd, Description = Abhydrolase domain-containing protein FAM108C1, PFAM = PF00561)' T '35.2' 'not assigned.unknown' 'niben101scf01791_94078-127078' '(at5g23490 : 604.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08440.1); Has 202 Blast hits to 197 proteins in 48 species: Archae - 0; Bacteria - 13; Metazoa - 25; Fungi - 9; Plants - 109; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (reliability: 1208.0) & (original description: Putative Os05g0100900, Description = Os05g0100900 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01792_1793-39824' '(at4g31430 : 105.0) unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative , Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01795_438850-444345' '(at3g04550 : 363.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28500.1); Has 110 Blast hits to 110 proteins in 51 species: Archae - 0; Bacteria - 67; Metazoa - 1; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 726.0) & (original description: Putative RAF2, Description = Rubisco accumulation factor 2, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01795_456739-464688' '(at3g04560 : 239.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 16 growth stages; Has 227 Blast hits to 225 proteins in 83 species: Archae - 0; Bacteria - 17; Metazoa - 98; Fungi - 29; Plants - 51; Viruses - 1; Other Eukaryotes - 31 (source: NCBI BLink). & (reliability: 478.0) & (original description: Putative , Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01795_481840-486399' '(at3g04550 : 363.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28500.1); Has 110 Blast hits to 110 proteins in 51 species: Archae - 0; Bacteria - 67; Metazoa - 1; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 726.0) & (original description: Putative RAF1, Description = Rubisco accumulation factor 1, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01798_13240-30237' '(at5g48020 : 581.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|33294 : 87.3) no description available & (reliability: 1162.0) & (original description: Putative At5g48020, Description = At5g48020, PFAM = PF14226)' T '35.2' 'not assigned.unknown' 'niben101scf01799_235460-242790' '(at1g23170 : 465.0) Protein of unknown function DUF2359, transmembrane; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2359, transmembrane (InterPro:IPR019308); BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF2359, transmembrane (TAIR:AT1G70770.2). & (gnl|cdd|39668 : 379.0) no description available & (reliability: 930.0) & (original description: Putative BnaC06g31910D, Description = BnaC06g31910D protein, PFAM = PF10151)' T '35.2' 'not assigned.unknown' 'niben101scf01800_181762-193924' '(at1g32190 : 393.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G24320.1); Has 8246 Blast hits to 4770 proteins in 635 species: Archae - 4; Bacteria - 774; Metazoa - 5275; Fungi - 116; Plants - 474; Viruses - 14; Other Eukaryotes - 1589 (source: NCBI BLink). & (gnl|cdd|36765 : 308.0) no description available & (reliability: 786.0) & (original description: Putative hyd, Description = Abhydrolase domain-containing protein FAM108C1, PFAM = PF12146)' T '35.2' 'not assigned.unknown' 'niben101scf01802_63754-67726' '(at1g45688 : 273.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 546.0) & (original description: Putative BnaA10g05480D, Description = BnaA10g05480D protein, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'niben101scf01807_233053-274927' '(at1g67570 : 416.0) Protein of unknown function (DUF3537); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3537 (InterPro:IPR021924); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3537) (TAIR:AT3G20300.1); Has 140 Blast hits to 140 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 138; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 832.0) & (original description: Putative BnaC06g28600D, Description = BnaC06g28600D protein, PFAM = PF12056)' T '35.2' 'not assigned.unknown' 'niben101scf01808_57296-80339' '(at5g47860 : 536.0) Protein of unknown function (DUF1350); LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1350 (InterPro:IPR010765); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1350) (TAIR:AT3G43540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70542 : 177.0) no description available & (reliability: 1072.0) & (original description: Putative At5g47860, Description = AT5g47860/MCA23_20, PFAM = PF07082)' T '35.2' 'not assigned.unknown' 'niben101scf01808_107124-117942' '(at4g14100 : 285.0) transferases, transferring glycosyl groups; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 570.0) & (original description: Putative At4g14100, Description = Uncharacterized protein At4g14100, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01810_150253-152558' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01810_217997-220688' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01811_169022-171681' ' no hits & (original description: Putative ZFP5, Description = C2H2 zinc finger protein 5, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01812_180173-206041' '(at5g27740 : 590.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 2775 (EMB2775); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp-loader complex, subunit E, C-terminal (InterPro:IPR019483), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921); BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA) (TAIR:AT1G21690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37246 : 516.0) no description available & (gnl|cdd|80670 : 178.0) no description available & (reliability: 1180.0) & (original description: Putative RFC3, Description = Replication factor C subunit 3, PFAM = PF13177)' T '35.2' 'not assigned.unknown' 'niben101scf01812_382291-387108' '(at5g06560 : 432.0) Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT3G11850.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68159 : 113.0) no description available & (reliability: 864.0) & (original description: Putative MYOB7, Description = Zein-binding domain-containing protein, PFAM = PF04576)' T '35.2' 'not assigned.unknown' 'niben101scf01812_382561-386600' '(at5g06560 : 386.0) Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT3G11850.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68159 : 108.0) no description available & (reliability: 772.0) & (original description: Putative MYOB7, Description = Zein-binding domain-containing protein, PFAM = PF04576)' T '35.2' 'not assigned.unknown' 'niben101scf01812_581064-583546' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01814_356230-359155' ' (original description: Putative PGSC0003DMG400010018, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01814_547360-553147' '(at4g37080 : 456.0) Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT5G42690.2). & (gnl|cdd|68359 : 192.0) no description available & (reliability: 912.0) & (original description: Putative BnaC01g01850D, Description = BnaC01g01850D protein, PFAM = PF14389;PF04784)' T '35.2' 'not assigned.unknown' 'niben101scf01817_356122-358707' '(at4g23720 : 95.1) Protein of unknown function (DUF1191); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1191 (InterPro:IPR010605); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1191) (TAIR:AT4G01140.1); Has 106 Blast hits to 106 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 106; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70178 : 93.6) no description available & (reliability: 190.2) & (original description: Putative glysoja_002862, Description = Atpob1, putative, PFAM = PF06697)' T '35.2' 'not assigned.unknown' 'niben101scf01817_378101-380696' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01818_1-6772' ' (original description: Putative LOC100284117, Description = Dual specificity protein phosphatase Diacylglycerol kinase, catalytic region, PFAM = PF00782)' T '35.2' 'not assigned.unknown' 'niben101scf01818_731948-741266' '(at5g13390 : 1118.0) Required for normal pollen development and lipid accumulation within the tapetum; NO EXINE FORMATION 1 (NEF1); LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 2236.0) & (original description: Putative orf265a, Description = Orf265a protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01818_865238-873420' '(at1g44960 : 209.0) SNARE associated Golgi protein family; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); Has 1433 Blast hits to 1432 proteins in 513 species: Archae - 4; Bacteria - 1059; Metazoa - 2; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 221 (source: NCBI BLink). & (gnl|cdd|38350 : 91.9) no description available & (reliability: 418.0) & (original description: Putative PGSC0003DMG400002189, Description = Os11g0537300 protein, PFAM = PF09335)' T '35.2' 'not assigned.unknown' 'niben101scf01818_997444-1012207' '(at3g51980 : 333.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Nucleotide exchange factor Fes1 (InterPro:IPR013918), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1C (TAIR:AT5G02150.1); Has 632 Blast hits to 632 proteins in 203 species: Archae - 0; Bacteria - 3; Metazoa - 254; Fungi - 162; Plants - 146; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (gnl|cdd|37371 : 165.0) no description available & (reliability: 666.0) & (original description: Putative At3g51980, Description = Nucleotide exchange factor SIL1, PFAM = PF08609)' T '35.2' 'not assigned.unknown' 'niben101scf01818_1019186-1027509' '(at5g47870 : 210.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: cobalt ion binding (TAIR:AT1G71310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 420.0) & (original description: Putative PGSC0003DMG400027997, Description = At5g47870, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01822_1665609-1673426' '(at1g32220 : 330.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: thylakoid, chloroplast, plastoglobule; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G10730.1); Has 840 Blast hits to 838 proteins in 330 species: Archae - 22; Bacteria - 387; Metazoa - 19; Fungi - 146; Plants - 128; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|39489 : 271.0) no description available & (reliability: 660.0) & (original description: Putative At1g32220, Description = Uncharacterized protein At1g32220, chloroplastic, PFAM = PF13460)' T '35.2' 'not assigned.unknown' 'niben101scf01824_59145-77756' ' no hits & (original description: Putative PGSC0003DMG400003059, Description = Putative ovule protein, PFAM = PF01429;PF01429;PF01429)' T '35.2' 'not assigned.unknown' 'niben101scf01824_111244-113369' '(at4g31360 : 107.0) selenium binding; FUNCTIONS IN: selenium binding; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Selenoprotein, Rdx type (InterPro:IPR011893); BEST Arabidopsis thaliana protein match is: selenium binding (TAIR:AT2G24440.1); Has 221 Blast hits to 197 proteins in 65 species: Archae - 0; Bacteria - 10; Metazoa - 93; Fungi - 17; Plants - 58; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative At2g24440, Description = BnaA08g12540D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01826_214137-220003' '(at5g63440 : 409.0) Protein of unknown function (DUF167); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF167 (InterPro:IPR003746); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF167) (TAIR:AT1G49170.1); Has 732 Blast hits to 732 proteins in 300 species: Archae - 13; Bacteria - 428; Metazoa - 192; Fungi - 6; Plants - 66; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|38486 : 143.0) no description available & (reliability: 818.0) & (original description: Putative At5g63440, Description = UPF0235 protein At5g63440, PFAM = PF02594)' T '35.2' 'not assigned.unknown' 'niben101scf01826_338927-349331' ' no hits & (original description: Putative PGSC0003DMG401015175, Description = Putative B3 domain-containing protein-like, PFAM = PF02362;PF02362)' T '35.2' 'not assigned.unknown' 'niben101scf01827_136572-145226' '(at2g26270 : 439.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: BRCT domain-containing DNA repair protein (TAIR:AT3G43930.1); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 878.0) & (original description: Putative At2g26270, Description = Putative uncharacterized protein At2g26270, PFAM = PF12738)' T '35.2' 'not assigned.unknown' 'niben101scf01830_39468-42421' '(at1g64690 : 132.0) Encodes BRANCHLESS TRICHOME (BLT) involved in trichome development. A large portion of the internal amino acid sequence of BLT is predicted to form a coiled-coil domain. BLT mutants form branchless trichomes with blunt tips.; BRANCHLESS TRICHOME (BLT); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G50660.1); Has 8499 Blast hits to 5324 proteins in 475 species: Archae - 37; Bacteria - 382; Metazoa - 3924; Fungi - 509; Plants - 391; Viruses - 45; Other Eukaryotes - 3211 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative BLT, Description = Branchless trichomes, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01834_91062-104997' '(at3g10650 : 190.0) BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast hits to 31782 proteins in 2093 species: Archae - 202; Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants - 1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI BLink). & (reliability: 380.0) & (original description: Putative PGSC0003DMG400023499, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01834_203019-206524' '(at1g49975 : 90.1) INVOLVED IN: photosynthesis; LOCATED IN: photosystem I, chloroplast, thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit N (InterPro:IPR008796); Has 34 Blast hits to 34 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 180.2) & (original description: Putative At1g49975, Description = At1g49975, PFAM = PF05479)' T '35.2' 'not assigned.unknown' 'niben101scf01834_530413-534925' ' no hits & (original description: Putative PGSC0003DMG400023979, Description = Putative uncharacterized protein Sb04g021780, PFAM = PF04568)' T '35.2' 'not assigned.unknown' 'niben101scf01841_346709-349077' '(at2g37530 : 111.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G07795.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative BnaC03g20740D, Description = BnaC03g20740D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01842_215931-218173' ' no hits & (original description: Putative ZPR3, Description = BnaA04g05260D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01842_357936-360486' ' no hits & (original description: Putative , Description = , PFAM = PF13966)' T '35.2' 'not assigned.unknown' 'niben101scf01847_208764-211150' ' no hits & (original description: Putative BnaA09g43370D, Description = BnaA09g43370D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01848_26314-44697' ' no hits & (original description: Putative PGSC0003DMG400023471, Description = Single-stranded nucleic acid binding R3H protein, putative isoform 1, PFAM = PF01424)' T '35.2' 'not assigned.unknown' 'niben101scf01848_76077-78712' '(at5g12340 : 156.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative , Description = , PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf01848_535097-542254' '(at5g11950 : 350.0) Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At2G37210.; Putative lysine decarboxylase family protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86394 : 177.0) no description available & (reliability: 700.0) & (original description: Putative LOG8, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8, PFAM = PF03641)' T '35.2' 'not assigned.unknown' 'niben101scf01849_8825-597220' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01849_511062-516852' '(at5g55860 : 310.0) Plant protein of unknown function (DUF827); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT1G12150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 620.0) & (original description: Putative At5g55860, Description = WEB family protein At5g55860, PFAM = PF05701)' T '35.2' 'not assigned.unknown' 'niben101scf01851_99667-131014' '(at5g10730 : 365.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G15910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39489 : 271.0) no description available & (reliability: 730.0) & (original description: Putative At5g10730, Description = NAD(P)-binding Rossmann-fold superfamily protein isoform 2, PFAM = PF13460)' T '35.2' 'not assigned.unknown' 'niben101scf01851_438052-441080' ' no hits & (original description: Putative , Description = Retrovirus-related Pol polyprotein from transposon 17.6, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01852_111447-124615' '(at4g30150 : 1142.0) CONTAINS InterPro DOMAIN/s: Nucleolar 27S pre-rRNA processing, Urb2/Npa2 (InterPro:IPR018849); Has 58 Blast hits to 49 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 44; Viruses - 3; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 2284.0) & (original description: Putative , Description = , PFAM = PF10441)' T '35.2' 'not assigned.unknown' 'niben101scf01852_336040-403335' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Glutathione reductase, cytosolic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01856_31684-63312' '(at5g49150 : 913.0) Encodes a transmembrane domain containing protein expressed in sperm cells.; gamete expressed 2 (GEX2); CONTAINS InterPro DOMAIN/s: Filamin/ABP280 repeat (InterPro:IPR001298), Immunoglobulin-like fold (InterPro:IPR013783), Immunoglobulin E-set (InterPro:IPR014756), Filamin/ABP280 repeat-like (InterPro:IPR017868); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1826.0) & (original description: Putative GEX2, Description = Protein GAMETE EXPRESSED 2, PFAM = PF00630;PF00630)' T '35.2' 'not assigned.unknown' 'niben101scf01856_219023-221775' '(at3g06840 : 141.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49170.1); Has 33 Blast hits to 33 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01857_148402-153709' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01858_200208-203035' '(at1g64870 : 178.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G45200.1); Has 99 Blast hits to 91 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01859_358052-365988' '(at1g75150 : 154.0) unknown protein; Has 38228 Blast hits to 24529 proteins in 1168 species: Archae - 169; Bacteria - 4103; Metazoa - 14594; Fungi - 5866; Plants - 1861; Viruses - 317; Other Eukaryotes - 11318 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative glysoja_022019, Description = Putative uncharacterized protein F22H5.12, PFAM = PF09444)' T '35.2' 'not assigned.unknown' 'niben101scf01859_674923-677384' ' no hits & (original description: Putative , Description = , PFAM = PF02892)' T '35.2' 'not assigned.unknown' 'niben101scf01859_770532-792692' '(at1g47550 : 1435.0) Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.; exocyst complex component sec3A (SEC3A); INVOLVED IN: biological_process unknown; LOCATED IN: exocyst; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Exocyst complex, component Exoc1 (InterPro:IPR019160); BEST Arabidopsis thaliana protein match is: exocyst complex component sec3B (TAIR:AT1G47560.1). & (gnl|cdd|37359 : 964.0) no description available & (reliability: 2870.0) & (original description: Putative SEC3A, Description = Exocyst complex component SEC3A, PFAM = PF09763;PF09763;PF15277)' T '35.2' 'not assigned.unknown' 'niben101scf01859_892076-895734' ' no hits & (original description: Putative PGSC0003DMG403024846, Description = , PFAM = PF02362;PF02362)' T '35.2' 'not assigned.unknown' 'niben101scf01862_171616-184678' '(at4g24840 : 913.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein transport, Golgi organization; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: COG complex component, COG2 (InterPro:IPR009316); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69655 : 658.0) no description available & (gnl|cdd|37518 : 615.0) no description available & (reliability: 1826.0) & (original description: Putative BnaC07g39160D, Description = BnaC07g39160D protein, PFAM = PF12022;PF06148)' T '35.2' 'not assigned.unknown' 'niben101scf01862_190987-198397' '(at1g43580 : 563.0) Sphingomyelin synthetase family protein; Has 50 Blast hits to 47 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|38268 : 171.0) no description available & (reliability: 1126.0) & (original description: Putative BnaA02g13330D, Description = BnaA02g13330D protein, PFAM = PF14360)' T '35.2' 'not assigned.unknown' 'niben101scf01863_561-14150' ' no hits & (original description: Putative TCM_000819, Description = Histone-lysine N-methyltransferase NSD3, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01863_85931-88386' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01863_133144-135614' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01863_429708-432970' '(at1g10150 : 335.0) Carbohydrate-binding protein; FUNCTIONS IN: carbohydrate binding; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Carbohydrate-binding protein (TAIR:AT1G59510.1); Has 114 Blast hits to 112 proteins in 22 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 110; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 670.0) & (original description: Putative PP2A10, Description = Protein PHLOEM PROTEIN 2-LIKE A10, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01863_472404-474820' ' no hits & (original description: Putative PSK4, Description = Putative phytosulfokine peptide, PFAM = PF06404)' T '35.2' 'not assigned.unknown' 'niben101scf01872_117895-123299' '(at1g19140 : 345.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquinone biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: COQ9 (InterPro:IPR013718), Ubiquinone biosynthesis protein COQ9 (InterPro:IPR012762); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|71939 : 122.0) no description available & (reliability: 690.0) & (original description: Putative BnaC05g14800D, Description = BnaC05g14800D protein, PFAM = PF08511)' T '35.2' 'not assigned.unknown' 'niben101scf01876_230324-239096' '(at3g62900 : 258.0) CW-type Zinc Finger; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: trichome; CONTAINS InterPro DOMAIN/s: Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02990.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 516.0) & (original description: Putative At3g62900, Description = Zinc finger, CW-type, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01882_2207-4326' ' no hits & (original description: Putative psbJ, Description = Photosystem II reaction center protein J, PFAM = PF01788)' T '35.2' 'not assigned.unknown' 'niben101scf01884_44963-54100' '(at5g62270 : 360.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: mucin-related (TAIR:AT2G02880.1). & (reliability: 720.0) & (original description: Putative At5g62270, Description = Gb}, PFAM = PF12298)' T '35.2' 'not assigned.unknown' 'niben101scf01887_313910-319340' '(at4g37080 : 470.0) Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT5G42690.2). & (gnl|cdd|68359 : 184.0) no description available & (reliability: 940.0) & (original description: Putative BnaCnng39980D, Description = BnaCnng39980D protein, PFAM = PF04784;PF14389)' T '35.2' 'not assigned.unknown' 'niben101scf01888_458259-461214' '(gnl|cdd|67750 : 110.0) no description available & (at1g69070 : 108.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nop14-like protein (InterPro:IPR007276); Has 69842 Blast hits to 35213 proteins in 1572 species: Archae - 363; Bacteria - 20593; Metazoa - 20851; Fungi - 8010; Plants - 2912; Viruses - 517; Other Eukaryotes - 16596 (source: NCBI BLink). & (gnl|cdd|37358 : 104.0) no description available & (reliability: 216.0) & (original description: Putative AT1G69070, Description = Nucleolar protein 14, PFAM = PF04147;PF04147)' T '35.2' 'not assigned.unknown' 'niben101scf01888_618995-621380' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01888_776438-779022' ' no hits & (original description: Putative , Description = , PFAM = PF05097)' T '35.2' 'not assigned.unknown' 'niben101scf01892_135080-140564' '(at1g53460 : 207.0) BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.2); Has 485 Blast hits to 413 proteins in 88 species: Archae - 11; Bacteria - 27; Metazoa - 119; Fungi - 17; Plants - 101; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative T3F20.22, Description = At1g53460/T3F20_21, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01892_176339-183708' '(at1g78710 : 417.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 42; INVOLVED IN: biological_process unknown; EXPRESSED IN: central cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 43 (TAIR:AT2G30900.1); Has 1785 Blast hits to 1336 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1785; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 173.0) no description available & (reliability: 834.0) & (original description: Putative TBL42, Description = Protein trichome birefringence-like 42, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf01892_224289-229969' '(at1g17030 : 706.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G47010.2); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 1412.0) & (original description: Putative BnaC05g13140D, Description = BnaC05g13140D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01895_10087-15467' '(at4g37030 : 744.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12680.1); Has 101 Blast hits to 99 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1488.0) & (original description: Putative BnaCnng40020D, Description = BnaCnng40020D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01897_434382-436045' '(at5g01660 : 147.0) CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G11000.1); Has 16133 Blast hits to 7053 proteins in 482 species: Archae - 40; Bacteria - 1227; Metazoa - 10756; Fungi - 311; Plants - 1896; Viruses - 673; Other Eukaryotes - 1230 (source: NCBI BLink). & (p37707|b2_dauca : 100.0) B2 protein - Daucus carota (Carrot) & (reliability: 294.0) & (original description: Putative At5g01660, Description = Kelch-like protein 1, PFAM = PF10539)' T '35.2' 'not assigned.unknown' 'niben101scf01897_552544-560041' '(at5g01620 : 555.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 35 (TBL35); LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 34 (TAIR:AT2G38320.1). & (gnl|cdd|72785 : 157.0) no description available & (reliability: 1110.0) & (original description: Putative TBL35, Description = Protein trichome birefringence-like 35, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf01897_847345-853360' '(at3g08890 : 283.0) Protein of unknown function, DUF538; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT5G37070.1); Has 520 Blast hits to 520 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 520; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86647 : 140.0) no description available & (reliability: 566.0) & (original description: Putative BnaCnng40610D, Description = BnaCnng40610D protein, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben101scf01897_880251-882903' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01905_14758-17114' ' no hits & (original description: Putative Ccrd_024156, Description = Zinc finger, SWIM-type, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01905_52781-56751' '(at5g35160 : 1119.0) Endomembrane protein 70 protein family; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT4G12650.1). & (gnl|cdd|36492 : 748.0) no description available & (gnl|cdd|66650 : 555.0) no description available & (reliability: 2238.0) & (original description: Putative PGSC0003DMG400007821, Description = Transmembrane 9 superfamily member, PFAM = PF02990)' T '35.2' 'not assigned.unknown' 'niben101scf01911_351798-354289' '(at5g60680 : 128.0) Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT3G45210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68105 : 120.0) no description available & (reliability: 256.0) & (original description: Putative glysoja_007963, Description = , PFAM = PF04520)' T '35.2' 'not assigned.unknown' 'niben101scf01912_169079-171645' ' no hits & (original description: Putative PGSC0003DMG400000520, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01917_839447-951118' ' no hits & (original description: Putative ATHP, Description = AtTrxx, PFAM = PF00085)' T '35.2' 'not assigned.unknown' 'niben101scf01917_1148407-1152474' '(at5g11680 : 219.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WW-domain-binding protein (InterPro:IPR018826); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38504 : 117.0) no description available & (reliability: 438.0) & (original description: Putative T22P22_70, Description = Putative uncharacterized protein At5g11680, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01917_1154814-1171003' '(at2g31600 : 199.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative BnaA03g14620D, Description = BnaA03g14620D protein, PFAM = PF13891)' T '35.2' 'not assigned.unknown' 'niben101scf01918_499136-502272' ' (original description: Putative pr10, Description = Pathogenesis-related protein PR10, PFAM = PF00407)' T '35.2' 'not assigned.unknown' 'niben101scf01919_150827-153283' ' no hits & (original description: Putative Ccrd_001313, Description = Peptidoglycan-binding lysin domain-containing protein, PFAM = PF01476)' T '35.2' 'not assigned.unknown' 'niben101scf01919_169038-171322' ' no hits & (original description: Putative , Description = , PFAM = PF12609)' T '35.2' 'not assigned.unknown' 'niben101scf01922_36608-39045' ' no hits & (original description: Putative sph1, Description = S-protein homologue, PFAM = PF05938)' T '35.2' 'not assigned.unknown' 'niben101scf01922_57467-59910' ' (original description: Putative sph1, Description = S-protein homologue, PFAM = PF05938)' T '35.2' 'not assigned.unknown' 'niben101scf01922_149439-152050' '(at5g47920 : 109.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative Os02g0505500, Description = Os02g0505500 protein, PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben101scf01922_599056-605538' '(at2g33220 : 238.0) GRIM-19 protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photorespiration; LOCATED IN: mitochondrion, mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GRIM-19 (InterPro:IPR009346); BEST Arabidopsis thaliana protein match is: GRIM-19 protein (TAIR:AT1G04630.1); Has 333 Blast hits to 333 proteins in 145 species: Archae - 0; Bacteria - 0; Metazoa - 161; Fungi - 83; Plants - 67; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|38510 : 180.0) no description available & (gnl|cdd|87044 : 97.4) no description available & (reliability: 476.0) & (original description: Putative MEE4, Description = NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-A, PFAM = PF06212)' T '35.2' 'not assigned.unknown' 'niben101scf01922_1072685-1075889' ' no hits & (original description: Putative BnaCnng15000D, Description = BnaCnng15000D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01922_1140527-1143921' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01926_699780-702416' ' no hits & (original description: Putative etcl2, Description = Caprice and triptychon-like enhancer transcript variant X2, PFAM = PF00249)' T '35.2' 'not assigned.unknown' 'niben101scf01933_45151-48686' ' no hits & (original description: Putative TCM_000819, Description = Histone-lysine N-methyltransferase NSD3, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01933_412259-425226' '(at5g67620 : 160.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: microtubule; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative At5g67620, Description = At5g67620, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf01934_70644-72905' ' no hits & (original description: Putative RPL29A, Description = 60S ribosomal protein L29-1, PFAM = PF01779)' T '35.2' 'not assigned.unknown' 'niben101scf01934_437205-466737' '(at3g17030 : 601.0) Nucleic acid-binding proteins superfamily; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027); Has 37 Blast hits to 37 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 1202.0) & (original description: Putative , Description = , PFAM = PF17244;PF17246)' T '35.2' 'not assigned.unknown' 'niben101scf01936_512357-514719' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01936_627702-633166' '(at4g39860 : 325.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G22270.1); Has 148 Blast hits to 144 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 650.0) & (original description: Putative T5J17.30, Description = Putative uncharacterized protein AT4g39860, PFAM = PF13266)' T '35.2' 'not assigned.unknown' 'niben101scf01938_455612-458183' ' (original description: Putative pr10, Description = Major allergen Pru ar, putative, PFAM = PF00407)' T '35.2' 'not assigned.unknown' 'niben101scf01941_9608-14922' ' no hits & (original description: Putative PGSC0003DMG400022439, Description = Tetratricopeptide repeat-like superfamily protein, putative isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01941_96012-180988' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01941_143122-150692' '(at3g21465 : 397.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G15640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 794.0) & (original description: Putative At4g15640, Description = At4g15640, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01941_211901-216758' ' no hits & (original description: Putative SFR6, Description = BnaA09g20140D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01942_426450-430778' ' (original description: Putative WRKY12, Description = Putative WRKY transcription factor, PFAM = PF03106)' T '35.2' 'not assigned.unknown' 'niben101scf01942_524457-535420' '(at1g71760 : 122.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 84 Blast hits to 84 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative BnaC06g32730D, Description = BnaC06g32730D protein, PFAM = PF15749)' T '35.2' 'not assigned.unknown' 'niben101scf01942_584424-586013' '(at1g71740 : 80.5) unknown protein; Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative PGSC0003DMG400025075, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01942_586746-589216' '(at1g71730 : 117.0) unknown protein; Has 52 Blast hits to 52 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative EMB2, Description = Os05g0181901 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01942_597471-600331' ' no hits & (original description: Putative PGSC0003DMG400036841, Description = , PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf01942_612313-615342' ' (original description: Putative , Description = Putative ovule protein, PFAM = PF03108;PF10551)' T '35.2' 'not assigned.unknown' 'niben101scf01942_866397-870049' ' (original description: Putative ERF3, Description = Ethylene response factor 3, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'niben101scf01947_5245-13336' '(at3g18790 : 325.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isy1-like splicing (InterPro:IPR009360); Has 1147 Blast hits to 965 proteins in 236 species: Archae - 12; Bacteria - 13; Metazoa - 351; Fungi - 230; Plants - 49; Viruses - 9; Other Eukaryotes - 483 (source: NCBI BLink). & (gnl|cdd|69751 : 270.0) no description available & (gnl|cdd|38278 : 254.0) no description available & (reliability: 650.0) & (original description: Putative isy1, Description = Rab43 protein, PFAM = PF06246)' T '35.2' 'not assigned.unknown' 'niben101scf01948_104651-109576' '(at3g01680 : 530.0) CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1060.0) & (original description: Putative SEOc, Description = Sieve element occlusion c, PFAM = PF14576;PF14577)' T '35.2' 'not assigned.unknown' 'niben101scf01948_112925-116994' '(at1g78790 : 107.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2008 (InterPro:IPR018552); Has 27 Blast hits to 27 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative Sb06g020330, Description = Putative uncharacterized protein Sb06g020330, PFAM = PF09415)' T '35.2' 'not assigned.unknown' 'niben101scf01950_477942-481865' '(at5g14090 : 173.0) unknown protein; Has 56 Blast hits to 56 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 46; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 346.0) & (original description: Putative glysoja_025472, Description = Regulator of nonsense transcripts 3A, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01958_282119-285597' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01958_361836-365418' '(gnl|cdd|68298 : 186.0) no description available & (at1g62420 : 171.0) Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT1G12030.1); Has 389 Blast hits to 387 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 387; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative , Description = , PFAM = PF04720)' T '35.2' 'not assigned.unknown' 'niben101scf01959_836678-838111' ' no hits & (original description: Putative orf150, Description = Orf110b protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01959_838112-839695' ' no hits & (original description: Putative orf279, Description = Uncharacterized mitochondrial protein AtMg01280, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01962_152771-155307' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01964_88722-94635' '(at5g26760 : 211.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF408 (InterPro:IPR007308); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86568 : 111.0) no description available & (reliability: 422.0) & (original description: Putative At5g26760, Description = RNA polymerase II-associated protein 2 homolog, PFAM = PF04181)' T '35.2' 'not assigned.unknown' 'niben101scf01964_152936-157984' '(at5g26749 : 131.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, U1-C type (InterPro:IPR013085), Zinc finger, U1-type (InterPro:IPR003604). & (reliability: 262.0) & (original description: Putative Os01g0252200, Description = Zinc finger CCCH domain-containing protein 3, PFAM = PF06220;PF00642)' T '35.2' 'not assigned.unknown' 'niben101scf01964_275493-277864' ' no hits & (original description: Putative , Description = , PFAM = PF15699)' T '35.2' 'not assigned.unknown' 'niben101scf01964_392904-396820' '(at5g65960 : 162.0) GTP binding; FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial Rho-like (InterPro:IPR013684), Alpha/gamma-adaptin-binding protein p34 (InterPro:IPR019341); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39474 : 137.0) no description available & (reliability: 324.0) & (original description: Putative At5g65960, Description = Alpha/gamma-adaptin-binding protein p34, PFAM = PF10199)' T '35.2' 'not assigned.unknown' 'niben101scf01964_923030-925551' '(at1g56580 : 148.0) Encodes SMALLER WITH VARIABLE BRANCHES (SVB), a protein with a conserved domain of unknown function (DUF538). The trichomes of the SVB mutants are smaller and exhibit branches of variable length and number.; SMALLER WITH VARIABLE BRANCHES (SVB); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT1G09310.1); Has 365 Blast hits to 365 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 365; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86647 : 123.0) no description available & (reliability: 296.0) & (original description: Putative SVB, Description = At1g56580/F25P12_18, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben101scf01964_930218-932847' '(at2g34580 : 92.4) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Herpesvirus UL139, cytomegalovirus (InterPro:IPR021042); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative BnaC04g53850D, Description = BnaC04g53850D protein, PFAM = PF12507)' T '35.2' 'not assigned.unknown' 'niben101scf01964_1109427-1114500' '(at5g26800 : 118.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: IGR protein motif (InterPro:IPR019083); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative , Description = , PFAM = PF09597)' T '35.2' 'not assigned.unknown' 'niben101scf01964_1114954-1119070' ' no hits & (original description: Putative PGSC0003DMG400002795, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01964_1272391-1280077' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01968_106102-111311' ' no hits & (original description: Putative PGSC0003DMG400000036, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01968_181621-189434' '(at1g01770 : 604.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1446 (InterPro:IPR010839); Has 1597 Blast hits to 1509 proteins in 306 species: Archae - 4; Bacteria - 843; Metazoa - 22; Fungi - 131; Plants - 31; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink). & (gnl|cdd|70740 : 349.0) no description available & (reliability: 1208.0) & (original description: Putative , Description = , PFAM = PF07287)' T '35.2' 'not assigned.unknown' 'niben101scf01970_156126-170121' ' no hits & (original description: Putative , Description = , PFAM = PF08991)' T '35.2' 'not assigned.unknown' 'niben101scf01970_314674-325852' ' no hits & (original description: Putative , Description = , PFAM = PF08268)' T '35.2' 'not assigned.unknown' 'niben101scf01971_135395-145501' ' (original description: Putative SOEP, Description = KTI-C protein, PFAM = PF00197;PF00197)' T '35.2' 'not assigned.unknown' 'niben101scf01972_56551-59279' ' no hits & (original description: Putative , Description = Cysteine-rich protein, PFAM = PF09253)' T '35.2' 'not assigned.unknown' 'niben101scf01972_414320-416856' ' no hits & (original description: Putative F383_09440, Description = Ribosomal N-lysine methyltransferase 5, PFAM = PF15365)' T '35.2' 'not assigned.unknown' 'niben101scf01977_213762-217734' '(at1g01360 : 270.0) Encodes RCAR1 (regulatory components of ABA receptor). Interacts with and regulates the type 2C protein phosphatases (PP2Cs) ABI1 and ABI2. Functions as abscisic acid sensor.; regulatory component of ABA receptor 1 (RCAR1); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: PYR1-like 7 (TAIR:AT4G01026.1); Has 395 Blast hits to 395 proteins in 28 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 392; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 540.0) & (original description: Putative PYL9, Description = Abscisic acid receptor PYL9, PFAM = PF10604)' T '35.2' 'not assigned.unknown' 'niben101scf01978_6095-17013' ' no hits & (original description: Putative PGSC0003DMG400010503, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01978_43816-46922' ' no hits & (original description: Putative , Description = , PFAM = PF00304)' T '35.2' 'not assigned.unknown' 'niben101scf01978_142886-145934' ' no hits & (original description: Putative LCR78, Description = Defensin AMP1 protein, PFAM = PF00304)' T '35.2' 'not assigned.unknown' 'niben101scf01980_162178-183448' ' no hits & (original description: Putative , Description = Predicted protein, PFAM = PF16543)' T '35.2' 'not assigned.unknown' 'niben101scf01980_253647-262675' ' (original description: Putative Sb01g024390, Description = Putative uncharacterized protein Sb01g024390, PFAM = PF00150)' T '35.2' 'not assigned.unknown' 'niben101scf01980_478535-481368' ' no hits & (original description: Putative PGSC0003DMG400008558, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01980_636495-639397' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf01982_372486-385000' '(at4g39670 : 265.0) Glycolipid transfer protein (GLTP) family protein; FUNCTIONS IN: glycolipid transporter activity, glycolipid binding; INVOLVED IN: glycolipid transport; LOCATED IN: cytoplasm; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: Glycolipid transfer protein (GLTP) family protein (TAIR:AT2G34690.1); Has 290 Blast hits to 289 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 22; Plants - 133; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|39391 : 193.0) no description available & (gnl|cdd|87613 : 160.0) no description available & (reliability: 530.0) & (original description: Putative At4g39670, Description = ACD11 homolog protein, PFAM = PF08718)' T '35.2' 'not assigned.unknown' 'niben101scf01983_1220408-1223862' ' no hits & (original description: Putative PGSC0003DMG400040835, Description = Basix helix-loop-helix family protein, PFAM = PF00010)' T '35.2' 'not assigned.unknown' 'niben101scf01983_1306095-1309808' '(at1g29760 : 277.0) Putative adipose-regulatory protein (Seipin); CONTAINS InterPro DOMAIN/s: Adipose-regulatory protein, Seipin (InterPro:IPR009617); BEST Arabidopsis thaliana protein match is: Putative adipose-regulatory protein (Seipin) (TAIR:AT2G34380.1); Has 493 Blast hits to 422 proteins in 86 species: Archae - 0; Bacteria - 253; Metazoa - 134; Fungi - 11; Plants - 78; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|39401 : 155.0) no description available & (gnl|cdd|87152 : 143.0) no description available & (reliability: 554.0) & (original description: Putative BnaAnng22890D, Description = BnaAnng22890D protein, PFAM = PF06775)' T '35.2' 'not assigned.unknown' 'niben101scf01983_1313010-1315470' ' no hits & (original description: Putative PGSC0003DMG400007065, Description = , PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'niben101scf01984_17166-26832' ' no hits & (original description: Putative KGM_13952, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = PF03372)' T '35.2' 'not assigned.unknown' 'niben101scf01985_147861-150301' ' no hits & (original description: Putative PGSC0003DMG400031864, Description = Arabinogalactan protein 26, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01985_320131-324060' '(at2g32910 : 155.0) DCD (Development and Cell Death) domain protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative , Description = DCD domain protein, putative isoform 1, PFAM = PF10539)' T '35.2' 'not assigned.unknown' 'niben101scf01986_151208-154113' ' no hits & (original description: Putative glysoja_007451, Description = Retrotransposon gag protein, PFAM = PF08284)' T '35.2' 'not assigned.unknown' 'niben101scf01986_243392-252736' '(at2g41770 : 1023.0) Protein of unknown function (DUF288); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF288 (InterPro:IPR005049); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF288) (TAIR:AT3G57420.1); Has 196 Blast hits to 196 proteins in 30 species: Archae - 2; Bacteria - 9; Metazoa - 51; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 2046.0) & (original description: Putative At2g41770, Description = Expressed protein, PFAM = PF03385)' T '35.2' 'not assigned.unknown' 'niben101scf01987_42188-45152' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01987_125945-128438' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01991_82931-88710' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01991_120256-126410' '(at1g67040 : 199.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26910.3); Has 89 Blast hits to 84 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative PGSC0003DMG400026403, Description = , PFAM = PF14309;PF14383)' T '35.2' 'not assigned.unknown' 'niben101scf01991_157112-160943' '(at3g57360 : 240.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02370.2); Has 122 Blast hits to 122 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 74; Fungi - 4; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|39969 : 142.0) no description available & (reliability: 480.0) & (original description: Putative At3g57360, Description = At3g57360, PFAM = PF12928)' T '35.2' 'not assigned.unknown' 'niben101scf01991_217832-236332' '(at2g18410 : 297.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 594.0) & (original description: Putative ELP5, Description = Elongator complex protein 5, PFAM = PF10483)' T '35.2' 'not assigned.unknown' 'niben101scf01991_348426-352078' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf01993_333181-344947' '(at5g49820 : 640.0) EMBRYO DEFECTIVE 1879 (EMB1879); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT2G31190.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68458 : 405.0) no description available & (gnl|cdd|39450 : 374.0) no description available & (reliability: 1280.0) & (original description: Putative , Description = , PFAM = PF04884)' T '35.2' 'not assigned.unknown' 'niben101scf01993_604147-617944' '(at4g18530 : 476.0) Protein of unknown function (DUF707); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT4G12840.2); Has 310 Blast hits to 308 proteins in 22 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 303; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68772 : 335.0) no description available & (reliability: 952.0) & (original description: Putative BnaA01g09360D, Description = BnaA01g09360D protein, PFAM = PF05212)' T '35.2' 'not assigned.unknown' 'niben101scf01993_648707-651189' ' no hits & (original description: Putative orf161, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01993_821607-853301' '(q6rhr6|dmi1_medtr : 1153.0) Putative ion channel DMI-1 (Does not make infections protein 1) - Medicago truncatula (Barrel medic) & (at5g49960 : 1126.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1012 (InterPro:IPR010420); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1012) (TAIR:AT5G02940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 2252.0) & (original description: Putative SYM8, Description = Probable ion channel SYM8, PFAM = PF06241)' T '35.2' 'not assigned.unknown' 'niben101scf01998_156110-158463' ' no hits & (original description: Putative PGSC0003DMG400008197, Description = Probable magnesium transporter, PFAM = PF12023)' T '35.2' 'not assigned.unknown' 'niben101scf01998_275483-279864' '(at5g11950 : 350.0) Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At2G37210.; Putative lysine decarboxylase family protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86394 : 178.0) no description available & (reliability: 700.0) & (original description: Putative LOGL7, Description = Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL7, PFAM = PF03641)' T '35.2' 'not assigned.unknown' 'niben101scf01998_318750-321868' ' no hits & (original description: Putative PGSC0003DMG400003483, Description = B3 DNA binding domain-containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf01999_252981-259346' '(at3g56680 : 274.0) Single-stranded nucleic acid binding R3H protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Single-stranded nucleic acid binding R3H (InterPro:IPR001374); BEST Arabidopsis thaliana protein match is: Single-stranded nucleic acid binding R3H protein (TAIR:AT2G40960.1); Has 389 Blast hits to 389 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 196; Fungi - 53; Plants - 134; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|38164 : 170.0) no description available & (reliability: 548.0) & (original description: Putative At2g40960, Description = Expressed protein, PFAM = PF12752;PF01424)' T '35.2' 'not assigned.unknown' 'niben101scf01999_750228-754015' '(at1g10020 : 349.0) Protein of unknown function (DUF1005); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1005 (InterPro:IPR010410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1005) (TAIR:AT4G29310.1); Has 158 Blast hits to 158 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 6; Plants - 144; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|69725 : 240.0) no description available & (reliability: 698.0) & (original description: Putative PGSC0003DMG400000353, Description = At5g17640, PFAM = PF06219)' T '35.2' 'not assigned.unknown' 'niben101scf01999_776557-779003' '(at2g14660 : 149.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0310 (InterPro:IPR002740); Has 2761 Blast hits to 2761 proteins in 686 species: Archae - 5; Bacteria - 1143; Metazoa - 73; Fungi - 78; Plants - 42; Viruses - 0; Other Eukaryotes - 1420 (source: NCBI BLink). & (gnl|cdd|38593 : 135.0) no description available & (gnl|cdd|32770 : 95.4) no description available & (reliability: 298.0) & (original description: Putative , Description = EVE domain-containing protein, PFAM = PF01878;PF01878)' T '35.2' 'not assigned.unknown' 'niben101scf02001_339202-342325' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02001_351801-354984' '(at4g02210 : 92.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). & (reliability: 184.0) & (original description: Putative MTR_5g022570, Description = Myb/SANT-like DNA-binding domain protein, PFAM = PF12776)' T '35.2' 'not assigned.unknown' 'niben101scf02002_39373-41765' ' no hits & (original description: Putative CYS8, Description = Cysteine proteinase inhibitor, PFAM = PF16845)' T '35.2' 'not assigned.unknown' 'niben101scf02002_185701-188745' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02002_465486-469215' '(at4g22370 : 98.6) unknown protein; Has 12 Blast hits to 12 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 197.2) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02003_84878-102136' '(at1g17820 : 566.0) Putative integral membrane protein conserved region (DUF2404); FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2404, transmembrane (InterPro:IPR019411), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Putative integral membrane protein conserved region (DUF2404) (TAIR:AT1G73200.1); Has 588 Blast hits to 406 proteins in 156 species: Archae - 0; Bacteria - 7; Metazoa - 150; Fungi - 264; Plants - 48; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (gnl|cdd|37449 : 320.0) no description available & (reliability: 1132.0) & (original description: Putative At1g17820, Description = At1g17820, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02003_273360-279869' '(at1g73350 : 136.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative At1g73350, Description = Ankyrin repeat domain-containing protein 50 isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02006_454163-467214' '(gnl|cdd|69161 : 283.0) no description available & (at1g03610 : 234.0) Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT4G03420.1); Has 266 Blast hits to 262 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 263; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative At4g03420, Description = Putative uncharacterized protein AT4g03420, PFAM = PF05623)' T '35.2' 'not assigned.unknown' 'niben101scf02009_232903-235568' ' no hits & (original description: Putative PGSC0003DMG400024083, Description = Putative uncharacterized protein Sb01g049930, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02010_401333-429047' '(at5g10730 : 393.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G15910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39489 : 301.0) no description available & (gnl|cdd|31046 : 80.3) no description available & (reliability: 786.0) & (original description: Putative At5g10730, Description = AT5g10730/MAJ23_90, PFAM = PF13460)' T '35.2' 'not assigned.unknown' 'niben101scf02011_670667-672912' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02014_95646-110049' '(at1g11200 : 421.0) Protein of unknown function (DUF300); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT4G21570.1); Has 839 Blast hits to 837 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 285; Fungi - 195; Plants - 241; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink). & (gnl|cdd|37852 : 256.0) no description available & (gnl|cdd|67249 : 255.0) no description available & (reliability: 842.0) & (original description: Putative umc2329, Description = MAPK activating protein, PFAM = PF03619)' T '35.2' 'not assigned.unknown' 'niben101scf02015_4906-7208' '(at5g14602 : 90.5) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Methyltransferase-related protein (TAIR:AT5G18150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative BnaA03g06920D, Description = BnaA03g06920D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02015_390997-424213' '(at2g46915 : 387.0) Protein of unknown function (DUF3754); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3754 (InterPro:IPR022227); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3754) (TAIR:AT3G19340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 774.0) & (original description: Putative PGSC0003DMG400005503, Description = At2g46910/F14M4.26, PFAM = PF12576)' T '35.2' 'not assigned.unknown' 'niben101scf02015_653524-658299' '(at1g54385 : 503.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), Survival motor neuron interacting protein 1 (InterPro:IPR007022); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G03970.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1006.0) & (original description: Putative At1g54385, Description = ARM repeat superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02015_658300-660893' '(at1g55370 : 261.0) NDH-dependent cyclic electron flow 5 (NDF5); FUNCTIONS IN: carbohydrate binding, catalytic activity; INVOLVED IN: positive regulation of gene expression, photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013); BEST Arabidopsis thaliana protein match is: NDH-dependent cyclic electron flow 1 (TAIR:AT1G64770.1); Has 166 Blast hits to 165 proteins in 21 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 158; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 522.0) & (original description: Putative NDF5, Description = Protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02016_31822-38124' ' no hits & (original description: Putative At5g13340, Description = Arginine/serine-rich coiled coil protein, putative, PFAM = PF15346)' T '35.2' 'not assigned.unknown' 'niben101scf02023_56658-59773' '(at4g39820 : 390.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); Has 285 Blast hits to 281 proteins in 117 species: Archae - 4; Bacteria - 22; Metazoa - 124; Fungi - 26; Plants - 36; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (gnl|cdd|38007 : 323.0) no description available & (reliability: 780.0) & (original description: Putative At4g39820, Description = At4g39820, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02024_2023-4448' ' (original description: Putative , Description = , PFAM = PF05938)' T '35.2' 'not assigned.unknown' 'niben101scf02024_283707-326916' '(at4g13750 : 2046.0) Encodes NO VEIN (NOV), a plant-specific nuclear factor required for leaf vascular development, cellular patterning and stem cell maintenance in the root meristem, as well as for cotyledon outgrowth and separation. nov mutations affect many aspects of auxin-dependent development without directly affecting auxin perception.; NO VEIN (NOV); FUNCTIONS IN: ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: no vein-like (TAIR:AT1G08300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 4092.0) & (original description: Putative Os03g0803700, Description = Os03g0803700 protein, PFAM = PF13020)' T '35.2' 'not assigned.unknown' 'niben101scf02026_645752-648363' '(at3g61920 : 137.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot, hypocotyl, root, egg cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64700.1); Has 77 Blast hits to 77 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative , Description = , PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf02027_49441-57259' '(at5g51040 : 229.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF339 (InterPro:IPR005631). & (gnl|cdd|38536 : 110.0) no description available & (reliability: 458.0) & (original description: Putative SDHAF2, Description = Succinate dehydrogenase assembly factor 2, mitochondrial, PFAM = PF03937)' T '35.2' 'not assigned.unknown' 'niben101scf02027_108366-110926' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02027_259579-262780' '(at5g07330 : 125.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G63060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative BnaC09g48550D, Description = BnaC09g48550D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02027_277397-286020' '(at5g07380 : 555.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: egg cell; Has 84 Blast hits to 81 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 1110.0) & (original description: Putative , Description = Myb/SANT-like DNA-binding domain protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02029_75492-77956' '(at2g23690 : 150.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37240.1); Has 243 Blast hits to 243 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative , Description = , PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf02030_4770-9336' '(at1g79910 : 183.0) Regulator of Vps4 activity in the MVB pathway protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061); BEST Arabidopsis thaliana protein match is: Regulator of Vps4 activity in the MVB pathway protein (TAIR:AT1G52315.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37238 : 147.0) no description available & (gnl|cdd|67036 : 118.0) no description available & (reliability: 366.0) & (original description: Putative BnaA07g35910D, Description = BnaA07g35910D protein, PFAM = PF03398)' T '35.2' 'not assigned.unknown' 'niben101scf02030_37748-46456' '(at1g79915 : 311.0) Putative methyltransferase family protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); Has 424 Blast hits to 423 proteins in 116 species: Archae - 0; Bacteria - 1; Metazoa - 170; Fungi - 70; Plants - 129; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 622.0) & (original description: Putative At1g79915, Description = Putative methyltransferase family protein, PFAM = PF10294)' T '35.2' 'not assigned.unknown' 'niben101scf02030_46355-54185' '(at1g52320 : 573.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT5G25590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68357 : 308.0) no description available & (reliability: 1146.0) & (original description: Putative F19K6.7, Description = BZIP protein, putative, PFAM = PF04782;PF04783)' T '35.2' 'not assigned.unknown' 'niben101scf02030_58500-60763' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02030_90990-94139' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02030_670350-672781' ' no hits & (original description: Putative , Description = , PFAM = PF05938)' T '35.2' 'not assigned.unknown' 'niben101scf02031_65676-87612' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'niben101scf02031_562066-566439' '(at3g08800 : 196.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); Has 149 Blast hits to 148 proteins in 72 species: Archae - 0; Bacteria - 6; Metazoa - 108; Fungi - 3; Plants - 22; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|37470 : 130.0) no description available & (reliability: 392.0) & (original description: Putative SIEL, Description = Protein SHORT-ROOT INTERACTING EMBRYONIC LETHAL, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02031_562112-570958' '(at3g08800 : 538.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); Has 149 Blast hits to 148 proteins in 72 species: Archae - 0; Bacteria - 6; Metazoa - 108; Fungi - 3; Plants - 22; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|37470 : 243.0) no description available & (reliability: 1076.0) & (original description: Putative PGSC0003DMG400026051, Description = ARM repeat protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02031_564214-566748' ' no hits & (original description: Putative PGSC0003DMG400026051, Description = ARM repeat superfamily protein, putative isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02033_275377-277691' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02034_249708-304999' '(at1g67960 : 154.0) CONTAINS InterPro DOMAIN/s: Membrane protein,Tapt1/CMV receptor (InterPro:IPR008010); Has 447 Blast hits to 428 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 190; Fungi - 133; Plants - 49; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative POD1, Description = Pollen defective IN guidance-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02039_36092-39254' '(at1g13810 : 243.0) Restriction endonuclease, type II-like superfamily protein; FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: YqaJ viral recombinase family (InterPro:IPR019080), Exonuclease, phage-type/RecB, C-terminal (InterPro:IPR011604), Restriction endonuclease, type II-like (InterPro:IPR011335); BEST Arabidopsis thaliana protein match is: Restriction endonuclease, type II-like superfamily protein (TAIR:AT1G67660.1); Has 316 Blast hits to 315 proteins in 62 species: Archae - 0; Bacteria - 48; Metazoa - 55; Fungi - 0; Plants - 63; Viruses - 14; Other Eukaryotes - 136 (source: NCBI BLink). & (gnl|cdd|88132 : 86.5) no description available & (reliability: 486.0) & (original description: Putative At1g13810, Description = Restriction endonuclease, type II-like superfamily protein, PFAM = PF09588)' T '35.2' 'not assigned.unknown' 'niben101scf02041_432701-437130' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02041_441984-448044' '(at4g16444 : 162.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CHD5-like protein (InterPro:IPR007514); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative BnaAnng19680D, Description = BnaAnng19680D protein, PFAM = PF04420)' T '35.2' 'not assigned.unknown' 'niben101scf02041_486555-509038' '(at4g35560 : 899.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT5G05570.2). & (reliability: 1798.0) & (original description: Putative At4g35560, Description = DUO1-activated WD40 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02041_574007-580072' '(at2g17550 : 381.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 215 Blast hits to 205 proteins in 55 species: Archae - 5; Bacteria - 0; Metazoa - 50; Fungi - 10; Plants - 99; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (reliability: 762.0) & (original description: Putative , Description = , PFAM = PF14383;PF14309)' T '35.2' 'not assigned.unknown' 'niben101scf02042_105470-108619' ' no hits & (original description: Putative F383_18265, Description = ATP-dependent helicase/nuclease subunit A, PFAM = PF00397)' T '35.2' 'not assigned.unknown' 'niben101scf02043_109081-116433' '(at3g10250 : 309.0) Plant protein 1589 of unknown function; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476); BEST Arabidopsis thaliana protein match is: Plant protein 1589 of unknown function (TAIR:AT5G04090.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|88257 : 95.3) no description available & (reliability: 618.0) & (original description: Putative PGSC0003DMG400032127, Description = Histidine--tRNA ligase, PFAM = PF09713)' T '35.2' 'not assigned.unknown' 'niben101scf02043_673295-676971' '(at1g26355 : 85.1) SPIRAL1-LIKE1 belongs to a six-member gene family in Arabidopsis; all members share a high sequence similarity in amino- and carboxy-terminal regions. GUS expression was detected only in pollen; however, no endogenous transcript was found.; SPIRAL1-like1 (SP1L1); BEST Arabidopsis thaliana protein match is: SPIRAL1-like2 (TAIR:AT1G69230.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative SP1L1, Description = Protein SPIRAL1-like 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02043_688632-747983' ' no hits & (original description: Putative At2g03690, Description = Coenzyme Q biosynthesis protein 4 homolog, PFAM = PF05019)' T '35.2' 'not assigned.unknown' 'niben101scf02044_25050-32390' '(at2g14830 : 170.0) Regulator of Vps4 activity in the MVB pathway protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Zinc finger, UBP-type (InterPro:IPR001607), Histone deacetylase superfamily (InterPro:IPR000286); Has 863 Blast hits to 862 proteins in 184 species: Archae - 0; Bacteria - 6; Metazoa - 544; Fungi - 131; Plants - 94; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative BnaC09g08740D, Description = BnaC09g08740D protein, PFAM = PF02148)' T '35.2' 'not assigned.unknown' 'niben101scf02044_189263-191778' ' no hits & (original description: Putative zfp1, Description = Zinc finger protein 7, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02044_481150-492436' '(at2g14110 : 273.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; CONTAINS InterPro DOMAIN/s: HAD-superfamily phosphatase, subfamily IIIC (InterPro:IPR010033), NLI interacting factor (InterPro:IPR004274); Has 332 Blast hits to 325 proteins in 144 species: Archae - 0; Bacteria - 33; Metazoa - 65; Fungi - 121; Plants - 76; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|39749 : 131.0) no description available & (reliability: 546.0) & (original description: Putative pco127416b, Description = Magnesium-dependent phosphatase 1, PFAM = PF12689)' T '35.2' 'not assigned.unknown' 'niben101scf02044_561181-566736' '(at4g33600 : 537.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G33590.1); Has 131 Blast hits to 131 proteins in 40 species: Archae - 0; Bacteria - 9; Metazoa - 12; Fungi - 24; Plants - 58; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 1074.0) & (original description: Putative BnaA08g11520D, Description = BnaA08g11520D protein, PFAM = PF04577)' T '35.2' 'not assigned.unknown' 'niben101scf02044_1020093-1031670' '(at1g16650 : 550.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Has 486 Blast hits to 429 proteins in 154 species: Archae - 0; Bacteria - 55; Metazoa - 267; Fungi - 96; Plants - 28; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|37862 : 350.0) no description available & (reliability: 1100.0) & (original description: Putative Ccrd_022540, Description = Methyltransferase domain-containing protein, PFAM = PF13679)' T '35.2' 'not assigned.unknown' 'niben101scf02044_1218412-1220729' ' no hits & (original description: Putative PGSC0003DMG400022131, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02045_419195-447433' '(at5g12920 : 464.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943). & (reliability: 928.0) & (original description: Putative At5g12920, Description = WD40 domain-containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02054_248379-252872' '(gnl|cdd|69613 : 760.0) no description available & (at3g04350 : 713.0) Plant protein of unknown function (DUF946); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF946 (InterPro:IPR009291); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF946) (TAIR:AT5G18490.1); Has 389 Blast hits to 369 proteins in 101 species: Archae - 0; Bacteria - 21; Metazoa - 15; Fungi - 143; Plants - 203; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 1426.0) & (original description: Putative Sb02g037340, Description = Putative uncharacterized protein Sb02g037340, PFAM = PF06101)' T '35.2' 'not assigned.unknown' 'niben101scf02054_287401-294044' '(at5g32470 : 654.0) Haem oxygenase-like, multi-helical; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem oxygenase-like, multi-helical (InterPro:IPR016084), TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C (InterPro:IPR004305); Has 1988 Blast hits to 1985 proteins in 797 species: Archae - 79; Bacteria - 1526; Metazoa - 2; Fungi - 151; Plants - 51; Viruses - 0; Other Eukaryotes - 179 (source: NCBI BLink). & (gnl|cdd|31161 : 120.0) no description available & (reliability: 1308.0) & (original description: Putative PGSC0003DMG400008580, Description = Heme oxygenase-like, multi-helical isoform 1, PFAM = PF03070)' T '35.2' 'not assigned.unknown' 'niben101scf02056_189877-192299' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02056_279784-289010' '(at5g48470 : 524.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1048.0) & (original description: Putative PGSC0003DMG400013943, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02056_341716-346320' ' no hits & (original description: Putative At5g48480, Description = Uncharacterized protein At5g48480, PFAM = PF06983)' T '35.2' 'not assigned.unknown' 'niben101scf02056_369819-377907' '(at5g48500 : 83.6) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative At5g48500, Description = Putative uncharacterized protein At5g48500, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02056_384553-388225' '(at5g48500 : 102.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative F383_27938, Description = Atp-dependent rna helicase dbp7, PFAM = PF05627)' T '35.2' 'not assigned.unknown' 'niben101scf02057_158239-161117' '(at5g10750 : 377.0) Protein of unknown function (DUF1336); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT5G24990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70520 : 219.0) no description available & (reliability: 754.0) & (original description: Putative EDR2, Description = Pleckstrin-like (PH) and lipid-binding START domain protein, PFAM = PF07059)' T '35.2' 'not assigned.unknown' 'niben101scf02059_467697-474098' '(at2g47910 : 312.0) Encodes a chloroplast thylakoid membrane protein. Required for the assembly/accumulation of the NAD(P)H dehydrogenase complex of the photosynthetic electron transport chain.; chlororespiratory reduction 6 (CRR6); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: NAD(P)H dehydrogenase complex assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1817 (InterPro:IPR014946); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|87680 : 210.0) no description available & (reliability: 624.0) & (original description: Putative CRR6, Description = Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic, PFAM = PF08847)' T '35.2' 'not assigned.unknown' 'niben101scf02060_504792-508027' '(at3g06868 : 124.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02060_825043-827618' ' no hits & (original description: Putative , Description = , PFAM = PF04570)' T '35.2' 'not assigned.unknown' 'niben101scf02062_435324-451388' '(at2g16485 : 774.0) nucleic acid binding;zinc ion binding;DNA binding; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: histone modification, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Plus-3 domain, subgroup (InterPro:IPR018144), Zinc finger, PHD-type (InterPro:IPR001965), GYF (InterPro:IPR003169), SWIB/MDM2 domain (InterPro:IPR003121), Plus-3 (InterPro:IPR004343), SWIB domain (InterPro:IPR019835), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding (TAIR:AT3G51120.1); Has 38357 Blast hits to 25980 proteins in 1833 species: Archae - 670; Bacteria - 4778; Metazoa - 14464; Fungi - 4561; Plants - 3104; Viruses - 298; Other Eukaryotes - 10482 (source: NCBI BLink). & (gnl|cdd|37157 : 155.0) no description available & (gnl|cdd|47987 : 131.0) no description available & (reliability: 1548.0) & (original description: Putative Sb01g049770, Description = Putative uncharacterized protein Sb01g049770, PFAM = PF02201;PF02213;PF03126)' T '35.2' 'not assigned.unknown' 'niben101scf02063_318584-328233' '(at3g23200 : 136.0) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT3G53850.1); Has 208 Blast hits to 208 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative At3g23200, Description = CASP-like protein 5B3, PFAM = PF04535)' T '35.2' 'not assigned.unknown' 'niben101scf02063_543726-547627' '(at5g43400 : 539.0) Uncharacterised conserved protein UCP015417, vWA; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP015417, vWA (InterPro:IPR011205); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP015417, vWA (TAIR:AT5G43390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1078.0) & (original description: Putative Sb03g039040, Description = Putative uncharacterized protein Sb03g039040, PFAM = PF11443)' T '35.2' 'not assigned.unknown' 'niben101scf02063_562987-565508' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02066_124675-127441' ' (original description: Putative , Description = Reverse transcriptase, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf02066_359649-361990' ' no hits & (original description: Putative , Description = , PFAM = PF12023)' T '35.2' 'not assigned.unknown' 'niben101scf02066_534749-538121' ' (original description: Putative pr10, Description = Pathogenesis-related protein 10, PFAM = PF00407)' T '35.2' 'not assigned.unknown' 'niben101scf02068_294248-313068' '(at3g04020 : 292.0) unknown protein; Has 26 Blast hits to 25 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 584.0) & (original description: Putative BnaA05g37370D, Description = BnaA05g37370D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02068_411486-443651' '(at5g63910 : 590.0) Encodes a farnesylcysteine lyase (EC 1.8.3.5) involved in a salvage /detoxification pathway of farnesylcysteine (FC) residues that are liberated during the degradation of prenylated proteins. Because FC is a competitive inhibitor of prenylcysteine methyltransferases involved in the down-regulation of ABA signaling, fcly mutants with elevated FC levels are hypersensitive to ABA. The protein also appears to be glycosylated when translated in vitro in the presence of microsomal membranes and it likely requires FAD for enzymatic activity.; farnesylcysteine lyase (FCLY); FUNCTIONS IN: prenylcysteine oxidase activity; INVOLVED IN: prenylated protein catabolic process, abscisic acid mediated signaling pathway, farnesyl diphosphate metabolic process; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prenylcysteine lyase (InterPro:IPR010795), Prenylcysteine oxidase (InterPro:IPR017046); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87223 : 345.0) no description available & (reliability: 1180.0) & (original description: Putative FLCY, Description = Farnesylcysteine lyase, PFAM = PF07156;PF13450)' T '35.2' 'not assigned.unknown' 'niben101scf02068_593844-622390' '(at1g05960 : 912.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Uncharacterized protein (TAIR:AT2G41830.1); Has 335 Blast hits to 327 proteins in 101 species: Archae - 0; Bacteria - 6; Metazoa - 143; Fungi - 47; Plants - 128; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37088 : 360.0) no description available & (reliability: 1824.0) & (original description: Putative At1g05960, Description = ARM repeat superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02069_8989-11639' ' no hits & (original description: Putative ZOSMA_5G00780, Description = Subtilisin-like serine protease 3, PFAM = PF05922)' T '35.2' 'not assigned.unknown' 'niben101scf02069_151045-156649' '(at4g11090 : 493.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 23 (TBL23); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 24 (TAIR:AT4G23790.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|72785 : 155.0) no description available & (reliability: 986.0) & (original description: Putative TBL23, Description = Protein trichome birefringence-like 23, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf02071_425083-429125' ' no hits & (original description: Putative PGSC0003DMG400030232, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02072_75444-77711' '(at3g63390 : 113.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative At3g63390, Description = At3g63390, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02072_315305-318963' '(at4g08810 : 743.0) Calcium binding protein involved in cryptochrome and phytochrome coaction; SUB1; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04280.1); Has 128 Blast hits to 128 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 127; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 1486.0) & (original description: Putative SUB1, Description = AT4g08810/T32A17_120, PFAM = PF10250)' T '35.2' 'not assigned.unknown' 'niben101scf02072_415499-421113' '(at3g10250 : 226.0) Plant protein 1589 of unknown function; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476); BEST Arabidopsis thaliana protein match is: Plant protein 1589 of unknown function (TAIR:AT5G04090.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative PGSC0003DMG400032127, Description = Histidine--tRNA ligase, PFAM = PF09713)' T '35.2' 'not assigned.unknown' 'niben101scf02073_786530-791679' '(at1g33810 : 168.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 39 Blast hits to 39 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative At1g33810, Description = Putative uncharacterized protein At1g33810, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02077_560920-563864' ' no hits & (original description: Putative atpC, Description = F-ATPase gamma subunit, PFAM = PF00231)' T '35.2' 'not assigned.unknown' 'niben101scf02077_935046-942721' ' (original description: Putative serB, Description = Protein ApaG, PFAM = PF04379;PF02151;PF02151)' T '35.2' 'not assigned.unknown' 'niben101scf02077_1244047-1250778' '(at5g63040 : 308.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 616.0) & (original description: Putative At5g63040, Description = At5g63040, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02078_6325-9823' '(at4g33985 : 141.0) Protein of unknown function (DUF1685); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1685) (TAIR:AT2G15590.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71376 : 112.0) no description available & (reliability: 282.0) & (original description: Putative , Description = , PFAM = PF07939)' T '35.2' 'not assigned.unknown' 'niben101scf02078_510199-512975' '(at1g17620 : 132.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11890.1); Has 824 Blast hits to 823 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 824; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 111.0) no description available & (reliability: 264.0) & (original description: Putative BnaA08g23020D, Description = BnaA08g23020D protein, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'niben101scf02078_669106-678080' ' (original description: Putative PGSC0003DMG400002584, Description = , PFAM = PF05266;PF05641)' T '35.2' 'not assigned.unknown' 'niben101scf02081_69525-76218' '(at1g01690 : 165.0) Encodes a novel plant-specific protein that is involved in meiotic double strand break formation.; putative recombination initiation defects 3 (PRD3); Has 279 Blast hits to 273 proteins in 87 species: Archae - 2; Bacteria - 106; Metazoa - 105; Fungi - 5; Plants - 32; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (q75ry2|pair1_orysa : 86.3) Protein PAIR1 (HOMOLOGOUS PAIRING ABERRATION IN RICE MEIOSIS 1 protein) - Oryza sativa (Rice) & (reliability: 330.0) & (original description: Putative PGSC0003DMG400000173, Description = Recombination initiation defects 3, putative isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02081_129749-138600' '(at4g00440 : 226.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 1283 Blast hits to 1059 proteins in 155 species: Archae - 0; Bacteria - 77; Metazoa - 265; Fungi - 74; Plants - 239; Viruses - 0; Other Eukaryotes - 628 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative , Description = , PFAM = PF14309;PF12552)' T '35.2' 'not assigned.unknown' 'niben101scf02081_210813-235732' '(at4g00450 : 1715.0) Encodes the Arabidopsis homolog of the transcriptional regulator MED12, is dynamically expressed during embryogenesis and regulates both developmental timing and the radial pattern formation. Involved in flowering time. The mutant enhances the expression of the flowering time (FT) gene. A knockout mutant of this gene showed late-flowering phenotype.; CENTER CITY (CCT); FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: photoperiodism, flowering, regulation of development, heterochronic, regulation of radial pattern formation; LOCATED IN: mediator complex, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med12 (InterPro:IPR019035); Has 216 Blast hits to 184 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 65; Plants - 86; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|39722 : 541.0) no description available & (gnl|cdd|88042 : 83.4) no description available & (reliability: 3430.0) & (original description: Putative MED12, Description = Mediator of RNA polymerase II transcription subunit 12, PFAM = PF09497)' T '35.2' 'not assigned.unknown' 'niben101scf02085_846823-849410' ' no hits & (original description: Putative SUP, Description = Transcriptional regulator superman protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02085_846868-849377' ' no hits & (original description: Putative N479, Description = Transcriptional regulator superman protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02085_1197822-1201264' '(at3g23160 : 274.0) Protein of unknown function (DUF668); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700), Protein of unknown function DUF3475 (InterPro:IPR021864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT5G04550.1); Has 431 Blast hits to 290 proteins in 19 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 424; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|68572 : 129.0) no description available & (reliability: 548.0) & (original description: Putative glysoja_022912, Description = Bet1-like SNARE 1-2, PFAM = PF05003;PF11961)' T '35.2' 'not assigned.unknown' 'niben101scf02085_1200514-1202786' ' no hits & (original description: Putative PGSC0003DMG400011009, Description = , PFAM = PF00280)' T '35.2' 'not assigned.unknown' 'niben101scf02085_1229500-1232297' ' no hits & (original description: Putative PGSC0003DMG400005003, Description = , PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf02085_2235584-2241167' '(at5g01620 : 570.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 35 (TBL35); LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 34 (TAIR:AT2G38320.1). & (gnl|cdd|72785 : 158.0) no description available & (reliability: 1140.0) & (original description: Putative ESK1, Description = PC-Esterase, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf02086_257506-260181' ' no hits & (original description: Putative Tgt1ORF2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02090_136431-787082' ' (original description: Putative RT, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf02093_67100-84267' '(at5g12230 : 166.0) MED19A; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19480.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative MED19A, Description = Mediator of RNA polymerase II transcription subunit 19a, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02093_361529-368784' '(at5g48385 : 581.0) FRIGIDA-like protein; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT4G14900.1); Has 1269 Blast hits to 1187 proteins in 101 species: Archae - 0; Bacteria - 22; Metazoa - 72; Fungi - 9; Plants - 1133; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|71337 : 331.0) no description available & (reliability: 1162.0) & (original description: Putative FRL3, Description = FRIGIDA-like protein 3, PFAM = PF07899)' T '35.2' 'not assigned.unknown' 'niben101scf02093_660425-663122' '(at3g07510 : 201.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative MEE60, Description = At5g05950, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02098_174083-180826' '(at4g12760 : 217.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 434.0) & (original description: Putative , Description = , PFAM = PF14767;PF14766;PF14768)' T '35.2' 'not assigned.unknown' 'niben101scf02098_276936-296757' '(at3g07565 : 239.0) Protein of unknown function (DUF3755); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3755 (InterPro:IPR022228); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3755) (TAIR:AT1G10820.2). & (reliability: 478.0) & (original description: Putative DRIF1, Description = DIV and RAD interacting factor 1, PFAM = PF12579)' T '35.2' 'not assigned.unknown' 'niben101scf02102_207369-209773' ' (original description: Putative AZI1, Description = pEARLI1-like lipid transfer protein 1, PFAM = PF14547)' T '35.2' 'not assigned.unknown' 'niben101scf02102_253561-255944' ' (original description: Putative corC, Description = 14 kDa proline-rich protein DC2.15, PFAM = PF14547)' T '35.2' 'not assigned.unknown' 'niben101scf02103_56427-58630' '(at1g52855 : 83.6) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15534.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02107_107246-116285' '(at4g36980 : 395.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147). & (gnl|cdd|37759 : 198.0) no description available & (reliability: 790.0) & (original description: Putative PGSC0003DMG400004042, Description = BnaA01g00770D protein, PFAM = PF09750)' T '35.2' 'not assigned.unknown' 'niben101scf02108_97068-111461' '(at1g53345 : 415.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09580.1); Has 201 Blast hits to 201 proteins in 75 species: Archae - 6; Bacteria - 102; Metazoa - 2; Fungi - 0; Plants - 47; Viruses - 7; Other Eukaryotes - 37 (source: NCBI BLink). & (reliability: 830.0) & (original description: Putative glysoja_037641, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02108_126822-143926' '(at3g17740 : 1038.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1740 (InterPro:IPR013633); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17712.1); Has 409 Blast hits to 335 proteins in 133 species: Archae - 1; Bacteria - 0; Metazoa - 140; Fungi - 188; Plants - 42; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|71853 : 249.0) no description available & (gnl|cdd|37183 : 159.0) no description available & (reliability: 2076.0) & (original description: Putative At3g17740, Description = At3g17740, PFAM = PF08424)' T '35.2' 'not assigned.unknown' 'niben101scf02108_168775-171185' ' no hits & (original description: Putative orf112a, Description = Orf112a, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02108_196342-198716' ' no hits & (original description: Putative PGSC0003DMG400033092, Description = SRF-type transcription factor family protein, PFAM = PF00319)' T '35.2' 'not assigned.unknown' 'niben101scf02108_301325-315709' '(at1g73470 : 310.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 620.0) & (original description: Putative Sb02g026190, Description = Putative uncharacterized protein Sb02g026190, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02108_315454-320274' ' no hits & (original description: Putative PGSC0003DMG400037321, Description = CASP-like protein, PFAM = PF04535)' T '35.2' 'not assigned.unknown' 'niben101scf02111_15951-21389' '(at4g16060 : 382.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 764.0) & (original description: Putative dl4070w, Description = Putative uncharacterized protein AT4g16060, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02111_930643-950636' '(at3g06670 : 961.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF625 (InterPro:IPR006887); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49390.1). & (gnl|cdd|37386 : 377.0) no description available & (gnl|cdd|86726 : 250.0) no description available & (reliability: 1922.0) & (original description: Putative LOC100502168, Description = Suppressor of Mek1, PFAM = PF04802)' T '35.2' 'not assigned.unknown' 'niben101scf02111_1419335-1425757' ' no hits & (original description: Putative hycB, Description = 4Fe-4S ferredoxin, PFAM = PF12617)' T '35.2' 'not assigned.unknown' 'niben101scf02111_1594372-1599404' ' no hits & (original description: Putative At3g06610, Description = DNA-binding enhancer family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02114_257632-274132' '(at1g14780 : 653.0) MAC/Perforin domain-containing protein; CONTAINS InterPro DOMAIN/s: Membrane attack complex component/perforin (MACPF) domain (InterPro:IPR020864); BEST Arabidopsis thaliana protein match is: MAC/Perforin domain-containing protein (TAIR:AT4G24290.2); Has 221 Blast hits to 220 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 0; Plants - 202; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|85702 : 95.1) no description available & (reliability: 1306.0) & (original description: Putative At1g14780, Description = MACPF domain-containing protein At1g14780, PFAM = PF01823)' T '35.2' 'not assigned.unknown' 'niben101scf02115_513055-522834' ' no hits & (original description: Putative , Description = , PFAM = PF07741)' T '35.2' 'not assigned.unknown' 'niben101scf02115_529421-540234' '(at4g32140 : 364.0) EamA-like transporter family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: EamA-like transporter family (TAIR:AT3G07080.1); Has 1581 Blast hits to 1581 proteins in 473 species: Archae - 40; Bacteria - 583; Metazoa - 277; Fungi - 235; Plants - 87; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink). & (gnl|cdd|37976 : 307.0) no description available & (reliability: 728.0) & (original description: Putative Sb06g030570, Description = Putative uncharacterized protein Sb06g030570, PFAM = PF00892)' T '35.2' 'not assigned.unknown' 'niben101scf02116_33275-59401' '(at2g32170 : 597.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: N2227-like (InterPro:IPR012901); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G32160.3); Has 521 Blast hits to 462 proteins in 193 species: Archae - 0; Bacteria - 2; Metazoa - 153; Fungi - 192; Plants - 76; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (gnl|cdd|38009 : 393.0) no description available & (gnl|cdd|71379 : 376.0) no description available & (reliability: 1194.0) & (original description: Putative At2g32170, Description = Putative uncharacterized protein At2g32170, PFAM = PF07942)' T '35.2' 'not assigned.unknown' 'niben101scf02116_43119-47698' '(at2g32170 : 235.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: N2227-like (InterPro:IPR012901); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G32160.3); Has 521 Blast hits to 462 proteins in 193 species: Archae - 0; Bacteria - 2; Metazoa - 153; Fungi - 192; Plants - 76; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (gnl|cdd|38009 : 192.0) no description available & (gnl|cdd|71379 : 190.0) no description available & (reliability: 470.0) & (original description: Putative At2g32170, Description = Putative uncharacterized protein At2g32170, PFAM = PF07942)' T '35.2' 'not assigned.unknown' 'niben101scf02119_56260-63502' '(at1g78995 : 130.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative Os06g0704200, Description = Os06g0704200 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02122_325122-328189' '(at1g22030 : 293.0) CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G77855.1); Has 99 Blast hits to 99 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 586.0) & (original description: Putative PGSC0003DMG400023770, Description = Monofunctional biosynthetic peptidoglycan transglycosylase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02123_84427-86831' ' no hits & (original description: Putative VQ18, Description = AtVQ18, PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf02124_35633-42777' '(at2g24100 : 411.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30780.1); Has 101 Blast hits to 101 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 822.0) & (original description: Putative F383_27717, Description = ATP-dependent DNA helicase pcrA, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02124_42091-46391' '(at1g80940 : 196.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative ski1, Description = Snf1-related kinase interactor 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02124_92662-100712' ' no hits & (original description: Putative PGSC0003DMG400014154, Description = Uncharacterized protein isoform 9, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02124_208381-212928' '(at1g16000 : 84.7) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80890.1); Has 41 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative GAG1At, Description = GAG1At protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02128_151430-153840' ' (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02130_61278-65595' '(at4g06536 : 164.0) SPla/RYanodine receptor (SPRY) domain-containing protein; CONTAINS InterPro DOMAIN/s: B302 (SPRY)-like (InterPro:IPR001870), SPla/RYanodine receptor SPRY (InterPro:IPR003877); Has 40 Blast hits to 40 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 7; Plants - 29; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative At4g06536, Description = At4g06536, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02132_90517-92945' ' no hits & (original description: Putative PGSC0003DMG400025347, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02132_111841-114870' ' no hits & (original description: Putative , Description = , PFAM = PF00011)' T '35.2' 'not assigned.unknown' 'niben101scf02132_224427-228536' '(gnl|cdd|71286 : 253.0) no description available & (gnl|cdd|39482 : 238.0) no description available & (at5g39890 : 234.0) Protein of unknown function (DUF1637); FUNCTIONS IN: cysteamine dioxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1637 (InterPro:IPR012864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1637) (TAIR:AT5G15120.1); Has 361 Blast hits to 361 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 102; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative PCO4, Description = Plant cysteine oxidase 4, PFAM = PF07847)' T '35.2' 'not assigned.unknown' 'niben101scf02133_25149-42537' ' (original description: Putative , Description = Enoyl-CoA hydratase/isomerase, PFAM = PF16113)' T '35.2' 'not assigned.unknown' 'niben101scf02133_432632-439082' '(at5g64160 : 166.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02133_491340-500995' ' (original description: Putative At3g13990, Description = AT3g13990/MDC16_11, PFAM = PF06972)' T '35.2' 'not assigned.unknown' 'niben101scf02133_822067-1053484' ' no hits & (original description: Putative PGSC0003DMG400022168, Description = Emp24/gp25L/p24 family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02134_170690-173109' ' no hits & (original description: Putative PGSC0003DMG400008077, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02134_179365-184684' '(at2g28430 : 84.7) unknown protein; Has 28 Blast hits to 28 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative At2g28430, Description = At2g28430/T1B3.5, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02136_177583-179685' '(at1g53035 : 163.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15358.1); Has 49 Blast hits to 49 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative At1g53035, Description = At1g53031, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02139_71103-73348' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02139_173978-176163' ' no hits & (original description: Putative , Description = , PFAM = PF08137)' T '35.2' 'not assigned.unknown' 'niben101scf02142_148406-151008' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02142_213563-221477' ' no hits & (original description: Putative xl2, Description = At4g29735, PFAM = PF05251)' T '35.2' 'not assigned.unknown' 'niben101scf02142_218446-220847' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02144_68044-70619' ' no hits & (original description: Putative PGSC0003DMG400018306, Description = Phospho-N-acetylmuramoyl-pentapeptide-transferase, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02145_155631-158731' '(at4g22190 : 161.0) unknown protein; Has 283 Blast hits to 154 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 24; Fungi - 12; Plants - 48; Viruses - 0; Other Eukaryotes - 197 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative TCM_030308, Description = Serine/arginine repetitive matrix protein 2, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02145_417368-429036' '(at4g04330 : 192.0) Chaperonin-like RbcX protein; CONTAINS InterPro DOMAIN/s: Chaperonin-like RbcX (InterPro:IPR003435); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative At4g04330, Description = Chaperonin-like RbcX protein, PFAM = PF02341)' T '35.2' 'not assigned.unknown' 'niben101scf02145_728744-742070' '(at1g62305 : 430.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT1G11940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86287 : 348.0) no description available & (reliability: 860.0) & (original description: Putative At1g62305, Description = At1g62305, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben101scf02145_990291-992253' ' no hits & (original description: Putative PGSC0003DMG400043522, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02145_1223275-1226416' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02148_79320-81754' ' no hits & (original description: Putative PGSC0003DMG400037400, Description = , PFAM = PF05938)' T '35.2' 'not assigned.unknown' 'niben101scf02151_28467-47984' '(at1g69070 : 590.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nop14-like protein (InterPro:IPR007276); Has 69842 Blast hits to 35213 proteins in 1572 species: Archae - 363; Bacteria - 20593; Metazoa - 20851; Fungi - 8010; Plants - 2912; Viruses - 517; Other Eukaryotes - 16596 (source: NCBI BLink). & (gnl|cdd|37358 : 506.0) no description available & (gnl|cdd|67750 : 489.0) no description available & (reliability: 1180.0) & (original description: Putative Os03g0598200, Description = Os03g0598200 protein, PFAM = PF04147)' T '35.2' 'not assigned.unknown' 'niben101scf02151_365897-368886' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02151_448006-464544' '(at1g26330 : 244.0) DNA binding; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), FY-rich, C-terminal (InterPro:IPR003889), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943). & (reliability: 488.0) & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02151_448162-464326' '(at1g26330 : 318.0) DNA binding; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), FY-rich, C-terminal (InterPro:IPR003889), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943). & (reliability: 636.0) & (original description: Putative At1g26330, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02155_325218-328075' '(at4g24910 : 199.0) Protein of unknown function (DUF579); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF579 (InterPro:IPR021148), Conserved hypothetical protein CHP01627 (InterPro:IPR006514); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF579) (TAIR:AT5G67210.1); Has 253 Blast hits to 252 proteins in 21 species: Archae - 0; Bacteria - 5; Metazoa - 1; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|68247 : 192.0) no description available & (reliability: 398.0) & (original description: Putative BnaC07g39180D, Description = BnaC07g39180D protein, PFAM = PF04669)' T '35.2' 'not assigned.unknown' 'niben101scf02156_1402214-1418281' '(at2g34050 : 293.0) INVOLVED IN: protein complex assembly; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATP11 (InterPro:IPR010591); Has 304 Blast hits to 304 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi - 112; Plants - 39; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|70128 : 219.0) no description available & (gnl|cdd|38491 : 180.0) no description available & (reliability: 586.0) & (original description: Putative BnaC04g44350D, Description = BnaC04g44350D protein, PFAM = PF06644)' T '35.2' 'not assigned.unknown' 'niben101scf02158_123355-125879' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02159_76517-82942' '(at4g24760 : 523.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G14390.1); Has 3811 Blast hits to 3801 proteins in 821 species: Archae - 8; Bacteria - 1310; Metazoa - 620; Fungi - 194; Plants - 289; Viruses - 6; Other Eukaryotes - 1384 (source: NCBI BLink). & (gnl|cdd|36765 : 348.0) no description available & (reliability: 1046.0) & (original description: Putative abhd17c, Description = Protein ABHD17C, PFAM = PF12146)' T '35.2' 'not assigned.unknown' 'niben101scf02164_21481-24095' '(at1g76600 : 107.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21010.1); Has 220 Blast hits to 220 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative F14G6.20, Description = Putative uncharacterized protein At1g76600, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf02164_253017-255616' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02165_52252-64283' '(at1g08030 : 526.0) Encodes a tyrosylprotein sulfotransferase (TPST). This protein is a 500-aa type I transmembrane protein that shows no sequence similarity to animal TPSTs. Activity confirmed by protein expression in yeast. TPST is expressed throughout the plant body, and the highest levels of expression are in the root apical meristem. A loss-of-function mutant TPST displayed a marked dwarf phenotype accompanied by stunted roots, pale green leaves, reduction in higher order veins, early senescence, and a reduced number of flowers and siliques.; tyrosylprotein sulfotransferase (TPST); FUNCTIONS IN: protein-tyrosine sulfotransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: Golgi apparatus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sulfotransferase (InterPro:IPR005331), Heparan sulphate 6-sulfotransferase (InterPro:IPR010635); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1052.0) & (original description: Putative TPST, Description = Protein-tyrosine sulfotransferase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02165_85798-88169' ' no hits & (original description: Putative At2g06320, Description = Retroelement pol polyprotein-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02167_139006-147977' '(at5g18440 : 129.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear fragile X mental retardation-interacting protein 1, conserved region (InterPro:IPR019496); Has 1333 Blast hits to 1211 proteins in 205 species: Archae - 0; Bacteria - 137; Metazoa - 339; Fungi - 162; Plants - 70; Viruses - 6; Other Eukaryotes - 619 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative PGSC0003DMG400027524, Description = Nuclear FMRP-interacting protein, PFAM = PF10453)' T '35.2' 'not assigned.unknown' 'niben101scf02168_720103-723923' '(at1g55340 : 180.0) Protein of unknown function (DUF1639); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1639 (InterPro:IPR012438); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1639) (TAIR:AT3G03880.1); Has 250 Blast hits to 247 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 250; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative F383_01731, Description = Aspartyl/glutamyl-tRNA (Asn/Gln) amidotransferase subunit B, PFAM = PF07797)' T '35.2' 'not assigned.unknown' 'niben101scf02169_389538-393148' '(at5g05480 : 422.0) Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A (InterPro:IPR021102); BEST Arabidopsis thaliana protein match is: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein (TAIR:AT3G14920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 844.0) & (original description: Putative PGSC0003DMG400030029, Description = Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A, PFAM = PF12222)' T '35.2' 'not assigned.unknown' 'niben101scf02170_373922-381086' '(at1g11940 : 394.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT1G62305.1); Has 575 Blast hits to 575 proteins in 19 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 548; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|86287 : 346.0) no description available & (reliability: 788.0) & (original description: Putative F12F1.19, Description = F12F1.19 protein, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben101scf02172_629410-632823' '(at3g25400 : 120.0) CONTAINS InterPro DOMAIN/s: NTP Pyrophosphohydrolase MazG-related, RS21-C6 (InterPro:IPR011394), EAR (InterPro:IPR009039), NTP pyrophosphohydrolase MazG, putative catalytic core (InterPro:IPR004518); Has 1123 Blast hits to 1121 proteins in 452 species: Archae - 22; Bacteria - 753; Metazoa - 81; Fungi - 3; Plants - 83; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative CDA03, Description = Nucleotide pyrophosphohydrolase, PFAM = PF12643)' T '35.2' 'not assigned.unknown' 'niben101scf02174_125323-136195' '(at5g45030 : 750.0) Trypsin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003); BEST Arabidopsis thaliana protein match is: Trypsin family protein (TAIR:AT2G35155.1); Has 134 Blast hits to 134 proteins in 31 species: Archae - 0; Bacteria - 55; Metazoa - 0; Fungi - 0; Plants - 79; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1500.0) & (original description: Putative F383_09839, Description = Metal-dependent hydrolase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02174_294660-297892' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02174_405842-412491' '(at2g39440 : 189.0) CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit C (InterPro:IPR013924); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87578 : 121.0) no description available & (reliability: 378.0) & (original description: Putative Os02g0168900, Description = Os02g0168900 protein, PFAM = PF08615)' T '35.2' 'not assigned.unknown' 'niben101scf02174_412484-422027' '(at1g10180 : 683.0) BEST Arabidopsis thaliana protein match is: exocyst complex component 84B (TAIR:AT5G49830.1); Has 132 Blast hits to 132 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|37426 : 388.0) no description available & (reliability: 1366.0) & (original description: Putative EXO84C, Description = Exocyst complex component EXO84C, PFAM = PF16528)' T '35.2' 'not assigned.unknown' 'niben101scf02175_47597-49965' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02175_216180-219055' '(at1g76240 : 217.0) Arabidopsis protein of unknown function (DUF241); FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT2G17080.1); Has 409 Blast hits to 404 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 404; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|66742 : 110.0) no description available & (reliability: 434.0) & (original description: Putative , Description = , PFAM = PF03087)' T '35.2' 'not assigned.unknown' 'niben101scf02175_329643-334761' '(at1g20460 : 96.3) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76185.1); Has 37 Blast hits to 37 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative BnaC06g21960D, Description = BnaC06g21960D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02175_568407-572032' ' no hits & (original description: Putative At1g75720, Description = WEB family protein At1g75720, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02175_632681-635091' ' no hits & (original description: Putative PGSC0003DMG400009937, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02182_699260-711225' '(at2g21195 : 86.7) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02182_1260477-1262794' '(at5g24860 : 161.0) encodes a small protein of 12.6 kDa that regulates flowering and is involved in gibberellin signalling pathway. It is expressed in apical meristems immediately after the photoperiodic induction of flowering. Genetic interactions with flowering time and floral organ identity genes suggest that this gene may be involved in modulating the competence to flower. There are two other genes similar to FPF1, FLP1 (At4g31380) and FLP2 (no locus name yet, on BAC F8F16 on chr 4). This is so far a plant-specific gene and is only found in long-day mustard, arabidopsis, and rice.; FLOWERING PROMOTING FACTOR 1 (FPF1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to gibberellin stimulus, positive regulation of flower development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10625.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative FPF1, Description = Flowering-promoting factor 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02182_1636537-1645937' '(at5g49900 : 1234.0) Beta-glucosidase, GBA2 type family protein; FUNCTIONS IN: catalytic activity, glucosylceramidase activity; INVOLVED IN: glucosylceramide catabolic process, sphingolipid metabolic process; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glucosylceramidase (InterPro:IPR006775), Six-hairpin glycosidase-like (InterPro:IPR008928), Beta-glucosidase, GBA2 type (InterPro:IPR014551); BEST Arabidopsis thaliana protein match is: Beta-glucosidase, GBA2 type family protein (TAIR:AT1G33700.2); Has 905 Blast hits to 755 proteins in 183 species: Archae - 77; Bacteria - 324; Metazoa - 146; Fungi - 0; Plants - 261; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|37330 : 1118.0) no description available & (gnl|cdd|68263 : 513.0) no description available & (reliability: 2468.0) & (original description: Putative GBA2, Description = GBA2, PFAM = PF04685;PF12215)' T '35.2' 'not assigned.unknown' 'niben101scf02182_1814050-1816388' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02187_181385-184137' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02188_71287-75493' ' no hits & (original description: Putative PGSC0003DMG400020205, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02191_250655-255014' ' no hits & (original description: Putative StHRGP, Description = Hydroxyproline-rich glycoprotein, PFAM = PF04554;PF04554;PF04554;PF04554;PF04554;PF04554;PF04554)' T '35.2' 'not assigned.unknown' 'niben101scf02195_731955-735666' '(at2g41120 : 236.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF309 (InterPro:IPR005500); Has 349 Blast hits to 349 proteins in 112 species: Archae - 2; Bacteria - 189; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative , Description = , PFAM = PF03745)' T '35.2' 'not assigned.unknown' 'niben101scf02199_170126-176625' '(at5g45310 : 194.0) unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: stem, inflorescence meristem, root, leaf; EXPRESSED DURING: LP.04 four leaves visible; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative PGSC0003DMG400020810, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02201_134351-142781' ' (original description: Putative PGSC0003DMG401014675, Description = Calcium-dependent protein kinase 23 isoform 3, PFAM = PF00036)' T '35.2' 'not assigned.unknown' 'niben101scf02201_162984-168465' ' no hits & (original description: Putative TCM_006456, Description = Integral membrane protein hemolysin-III, putative isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02207_118316-121317' '(at5g63100 : 340.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G44600.1); Has 163 Blast hits to 163 proteins in 58 species: Archae - 2; Bacteria - 69; Metazoa - 2; Fungi - 2; Plants - 84; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 680.0) & (original description: Putative At5g63100, Description = S-adenosyl-L-methionine-dependent methyltransferase domain-containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02207_892845-1223860' '(gnl|cdd|71256 : 86.7) no description available & (at1g70420 : 85.9) Protein of unknown function (DUF1645); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT1G23710.1); Has 179 Blast hits to 179 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 162; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative , Description = , PFAM = PF07816)' T '35.2' 'not assigned.unknown' 'niben101scf02207_1081996-1084346' ' no hits & (original description: Putative PGSC0003DMG400014888, Description = RNase H family protein, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'niben101scf02207_1221199-1224023' '(at5g62770 : 88.2) Protein of unknown function (DUF1645); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT1G70420.1); Has 173 Blast hits to 173 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 161; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative , Description = , PFAM = PF07816)' T '35.2' 'not assigned.unknown' 'niben101scf02210_573448-579619' '(at1g28120 : 371.0) CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323), Ubiquitin thioesterase Otubain (InterPro:IPR016615), Peptidase C65, otubain (InterPro:IPR019400); Has 413 Blast hits to 411 proteins in 139 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 83; Plants - 88; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (gnl|cdd|39194 : 277.0) no description available & (reliability: 742.0) & (original description: Putative otub1, Description = Ubiquitin thioesterase otubain-like protein, PFAM = PF10275)' T '35.2' 'not assigned.unknown' 'niben101scf02210_614311-621915' '(at5g19400 : 660.0) Encodes SMG7, a protein that possesses an evolutionarily conserved EST1 domain and exhibits strong homology to human SMG6 (EST1A) and SMG7 (EST1C) proteins. SMG7 plays an evolutionarily conserved role in nonsense-mediated RNA decay (NMD). Required for exit from meiosis. Hypomorphic smg7 alleles render mutant plants sterile by causing an unusual cell-cycle arrest in anaphase II that is characterized by delayed chromosome decondensation and aberrant rearrangement of the meiotic spindle. Disruption of SMG7 causes embryonic lethality.; SMG7; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: meiosis, spindle assembly involved in meiosis, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Telomerase activating protein Est1 (InterPro:IPR019458); BEST Arabidopsis thaliana protein match is: Telomerase activating protein Est1 (TAIR:AT1G28260.2). & (gnl|cdd|37373 : 234.0) no description available & (reliability: 1320.0) & (original description: Putative , Description = Smg-7, putative isoform 1, PFAM = PF10373;PF10374)' T '35.2' 'not assigned.unknown' 'niben101scf02210_883641-891071' '(at5g13310 : 100.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02211_220512-224399' '(at2g46890 : 356.0) FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system, integral to membrane, cytoplasm; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104), Protein of unknown function DUF1295 (InterPro:IPR010721); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1295) (TAIR:AT1G18180.1); Has 1895 Blast hits to 1895 proteins in 350 species: Archae - 2; Bacteria - 474; Metazoa - 74; Fungi - 141; Plants - 112; Viruses - 0; Other Eukaryotes - 1092 (source: NCBI BLink). & (gnl|cdd|39849 : 236.0) no description available & (gnl|cdd|70433 : 163.0) no description available & (reliability: 712.0) & (original description: Putative BnaA05g01010D, Description = BnaA05g01010D protein, PFAM = PF06966)' T '35.2' 'not assigned.unknown' 'niben101scf02212_29557-35004' '(at4g13690 : 94.4) unknown protein; Has 37 Blast hits to 37 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02214_281622-284008' ' no hits & (original description: Putative orf129, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02215_91803-102112' ' no hits & (original description: Putative F16B3.11, Description = AT3g02480/F16B3_11, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02215_150922-160412' '(at5g15900 : 489.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 19 (TBL19); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 21 (TAIR:AT5G15890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|72785 : 127.0) no description available & (reliability: 978.0) & (original description: Putative TBL19, Description = Protein trichome birefringence-like 19, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf02215_453470-457718' '(at2g23790 : 305.0) Protein of unknown function (DUF607); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF607 (InterPro:IPR006769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF607) (TAIR:AT4G36820.1); Has 364 Blast hits to 364 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 147; Fungi - 45; Plants - 131; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|38177 : 293.0) no description available & (gnl|cdd|68256 : 231.0) no description available & (reliability: 610.0) & (original description: Putative At2g23790, Description = Calcium uniporter protein 2, mitochondrial, PFAM = PF04678)' T '35.2' 'not assigned.unknown' 'niben101scf02216_123240-127642' '(at3g52115 : 226.0) Induced in response to ionizing radiation, shows basal expression in mitotically active cells and high expression in endoreduplicating cells. May be involved in DNA damage-induced growth arrest. Protein sequence contains a PEST destruction box.; gamma response gene 1 (GR1); INVOLVED IN: meiotic DNA double-strand break processing, response to DNA damage stimulus, gamete generation, response to ionizing radiation; EXPRESSED IN: bud, cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: DNA repair protein Sae2/CtIP (InterPro:IPR013882); Has 26568 Blast hits to 17186 proteins in 1344 species: Archae - 485; Bacteria - 2739; Metazoa - 14510; Fungi - 2010; Plants - 1072; Viruses - 86; Other Eukaryotes - 5666 (source: NCBI BLink). & (gnl|cdd|36183 : 126.0) no description available & (reliability: 452.0) & (original description: Putative PGSC0003DMG400006815, Description = GAMMA RESPONSE 1 family protein, PFAM = PF08573)' T '35.2' 'not assigned.unknown' 'niben101scf02217_162290-168428' '(at4g32915 : 132.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of translational fidelity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glu-tRNAGln amidotransferase, C subunit (InterPro:IPR003837); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative GATC, Description = Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial, PFAM = PF02686)' T '35.2' 'not assigned.unknown' 'niben101scf02218_143372-221242' ' no hits & (original description: Putative glysoja_030340, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02220_563900-670854' ' no hits & (original description: Putative , Description = Retrotransposon gag protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02223_188488-191336' '(at5g23100 : 256.0) Protein of unknown function, DUF617; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF617, plant (InterPro:IPR006460); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF617 (TAIR:AT3G25640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68336 : 226.0) no description available & (reliability: 512.0) & (original description: Putative MIZ1, Description = BnaA06g33470D protein, PFAM = PF04759)' T '35.2' 'not assigned.unknown' 'niben101scf02223_450573-461904' '(at1g26110 : 127.0) Encodes Decapping 5, required for mRNA decapping, P-body formation and translational repression during postembryonic development.; decapping 5 (DCP5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: negative regulation of translation, deadenylation-independent decapping of nuclear-transcribed mRNA, cytoplasmic mRNA processing body assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DFDF motif (InterPro:IPR019050), FFD/TFG box motif (InterPro:IPR019053); BEST Arabidopsis thaliana protein match is: decapping 5-like (TAIR:AT5G45330.1); Has 14874 Blast hits to 10327 proteins in 603 species: Archae - 12; Bacteria - 902; Metazoa - 6418; Fungi - 2978; Plants - 1226; Viruses - 261; Other Eukaryotes - 3077 (source: NCBI BLink). & (gnl|cdd|36290 : 122.0) no description available & (gnl|cdd|29723 : 118.0) no description available & (reliability: 254.0) & (original description: Putative sum2, Description = Protein LSM14 B, PFAM = PF09532;PF12701)' T '35.2' 'not assigned.unknown' 'niben101scf02228_2161-4749' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02228_246061-248650' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF00403)' T '35.2' 'not assigned.unknown' 'niben101scf02230_133314-143821' '(at5g17910 : 204.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29620.1). & (reliability: 408.0) & (original description: Putative PGSC0003DMG400028204, Description = BnaA05g12420D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02232_102948-108893' '(at2g34510 : 552.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF642 (TAIR:AT1G29980.1); Has 305 Blast hits to 265 proteins in 22 species: Archae - 0; Bacteria - 13; Metazoa - 0; Fungi - 0; Plants - 292; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68437 : 481.0) no description available & (reliability: 1104.0) & (original description: Putative Sb03g034960, Description = Putative uncharacterized protein Sb03g034960, PFAM = PF04862;PF04862)' T '35.2' 'not assigned.unknown' 'niben101scf02232_306801-310969' ' no hits & (original description: Putative PGSC0003DMG400037562, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02232_362576-365028' '(at5g46230 : 143.0) Protein of unknown function, DUF538; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT1G09310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86647 : 118.0) no description available & (reliability: 286.0) & (original description: Putative SVB, Description = At1g56580/F25P12_18, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben101scf02232_486680-489172' '(at1g21280 : 102.0) CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative PGSC0003DMG400018883, Description = Putative ovule protein, PFAM = PF03732;PF14244)' T '35.2' 'not assigned.unknown' 'niben101scf02232_486737-497300' '(at1g21280 : 102.0) CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF03732;PF14244)' T '35.2' 'not assigned.unknown' 'niben101scf02235_196750-202344' '(at5g18130 : 132.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative UKP, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02235_255669-257848' ' no hits & (original description: Putative MTR_7g085780, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02235_457314-460917' '(at1g55340 : 165.0) Protein of unknown function (DUF1639); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1639 (InterPro:IPR012438); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1639) (TAIR:AT3G03880.1); Has 250 Blast hits to 247 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 250; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 330.0) & (original description: Putative F383_27323, Description = Sterol O-acyltransferase 2, PFAM = PF07797)' T '35.2' 'not assigned.unknown' 'niben101scf02236_604636-616189' ' no hits & (original description: Putative xl2, Description = Putative uncharacterized protein xl2, PFAM = PF05251)' T '35.2' 'not assigned.unknown' 'niben101scf02236_819115-821822' '(at2g26110 : 100.0) Protein of unknown function (DUF761); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G56980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative PGSC0003DMG400021389, Description = , PFAM = PF14364;PF05553)' T '35.2' 'not assigned.unknown' 'niben101scf02237_272262-274961' '(at1g60010 : 106.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10530.1); Has 185 Blast hits to 185 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 180; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative , Description = Serine/threonine-protein kinase TAO3, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf02237_732387-735645' ' no hits & (original description: Putative dss1, Description = Deleted in split hand/splt foot protein 1, PFAM = PF05160)' T '35.2' 'not assigned.unknown' 'niben101scf02240_94809-110222' '(at4g21720 : 148.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, sepal, male gametophyte, root, flower; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage. & (reliability: 296.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02240_524501-526938' ' no hits & (original description: Putative znf, Description = Os02g0248320 protein, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf02240_1060049-1078126' '(at2g47960 : 577.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF974 (InterPro:IPR010378); Has 285 Blast hits to 284 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 150; Fungi - 68; Plants - 32; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|69666 : 336.0) no description available & (gnl|cdd|37836 : 210.0) no description available & (reliability: 1154.0) & (original description: Putative SCC3, Description = , PFAM = PF06159)' T '35.2' 'not assigned.unknown' 'niben101scf02243_454346-456894' '(gnl|cdd|68427 : 227.0) no description available & (at2g31160 : 223.0) LIGHT SENSITIVE HYPOCOTYLS 3 (LSH3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT1G07090.1); Has 309 Blast hits to 309 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative ELE, Description = Protein ELONGATED EMPTY GLUME, PFAM = PF04852)' T '35.2' 'not assigned.unknown' 'niben101scf02243_607761-619210' '(at2g31140 : 278.0) Peptidase S24/S26A/S26B/S26C family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (InterPro:IPR011056), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927); BEST Arabidopsis thaliana protein match is: Peptidase S24/S26A/S26B/S26C family protein (TAIR:AT1G06200.1); Has 227 Blast hits to 227 proteins in 70 species: Archae - 0; Bacteria - 14; Metazoa - 22; Fungi - 48; Plants - 131; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|36781 : 131.0) no description available & (reliability: 556.0) & (original description: Putative BnaA10g04140D, Description = BnaA10g04140D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02244_13864-17287' '(at1g60010 : 161.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10530.1); Has 185 Blast hits to 185 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 180; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative TCM_010230, Description = Serine/threonine-protein kinase TAO3, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf02244_107776-133616' '(at1g24050 : 160.0) RNA-processing, Lsm domain; CONTAINS InterPro DOMAIN/s: RNA-processing, Lsm domain (InterPro:IPR019181); BEST Arabidopsis thaliana protein match is: RNA-processing, Lsm domain (TAIR:AT1G70220.1); Has 228 Blast hits to 228 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 90; Fungi - 53; Plants - 56; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|39602 : 99.7) no description available & (reliability: 320.0) & (original description: Putative PHYPADRAFT_207347, Description = Predicted protein, PFAM = PF09793)' T '35.2' 'not assigned.unknown' 'niben101scf02245_167069-169548' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02247_25552-28273' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02248_218040-224268' '(at3g25805 : 390.0) unknown protein; Has 98 Blast hits to 98 proteins in 45 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 780.0) & (original description: Putative Sb06g019080, Description = Putative uncharacterized protein Sb06g019080, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02249_171004-177303' '(at5g24680 : 314.0) Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2; CONTAINS InterPro DOMAIN/s: Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 (InterPro:IPR012462); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39894 : 275.0) no description available & (gnl|cdd|87400 : 144.0) no description available & (reliability: 628.0) & (original description: Putative MTR_5g068730, Description = Zinc finger with UFM1-specific peptidase domain protein, PFAM = PF07910)' T '35.2' 'not assigned.unknown' 'niben101scf02249_229363-233241' ' no hits & (original description: Putative Os04g0600100, Description = OSJNBa0083N12.10 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02249_337740-345236' '(at3g03140 : 187.0) Tudor/PWWP/MBT superfamily protein; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT3G21295.1); Has 426 Blast hits to 278 proteins in 85 species: Archae - 0; Bacteria - 14; Metazoa - 209; Fungi - 70; Plants - 86; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative At3g03140, Description = BnaC04g49890D protein, PFAM = PF00855)' T '35.2' 'not assigned.unknown' 'niben101scf02249_362469-373007' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02250_253880-256224' ' no hits & (original description: Putative , Description = , PFAM = PF11493)' T '35.2' 'not assigned.unknown' 'niben101scf02252_97911-120593' '(at3g44330 : 679.0) INVOLVED IN: protein processing; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicalin (InterPro:IPR016574), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Nicastrin (InterPro:IPR008710); Has 245 Blast hits to 243 proteins in 99 species: Archae - 6; Bacteria - 10; Metazoa - 139; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|37737 : 573.0) no description available & (reliability: 1358.0) & (original description: Putative NCLN, Description = Nicalin, PFAM = PF05450)' T '35.2' 'not assigned.unknown' 'niben101scf02253_113260-119604' '(at3g28760 : 481.0) CONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase, prokaryotic-type (InterPro:IPR002812); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|85797 : 405.0) no description available & (reliability: 962.0) & (original description: Putative aroB, Description = 3-dehydroquinate synthase, PFAM = PF01959)' T '35.2' 'not assigned.unknown' 'niben101scf02253_1399765-1405052' ' no hits & (original description: Putative geg, Description = Gibberellin-regulated family protein, PFAM = PF02704)' T '35.2' 'not assigned.unknown' 'niben101scf02255_71593-78366' '(at5g05840 : 517.0) Protein of unknown function (DUF620); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF620 (InterPro:IPR006873); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF620) (TAIR:AT3G55720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68363 : 414.0) no description available & (reliability: 1034.0) & (original description: Putative F383_24390, Description = Glutamyl-tRNA (Gln) amidotransferase subunit A, PFAM = PF04788)' T '35.2' 'not assigned.unknown' 'niben101scf02261_71890-74600' '(at2g46150 : 129.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G64065.1); Has 262 Blast hits to 261 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 258; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative At2g46150, Description = Late embryogenesis abundant hydroxyproline-rich glycoprotein, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'niben101scf02261_101899-104498' ' no hits & (original description: Putative PGSC0003DMG400012315, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02262_140702-144365' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02264_304825-307784' ' no hits & (original description: Putative , Description = , PFAM = PF11595)' T '35.2' 'not assigned.unknown' 'niben101scf02264_353529-360241' '(at1g01690 : 164.0) Encodes a novel plant-specific protein that is involved in meiotic double strand break formation.; putative recombination initiation defects 3 (PRD3); Has 279 Blast hits to 273 proteins in 87 species: Archae - 2; Bacteria - 106; Metazoa - 105; Fungi - 5; Plants - 32; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (q75ry2|pair1_orysa : 89.4) Protein PAIR1 (HOMOLOGOUS PAIRING ABERRATION IN RICE MEIOSIS 1 protein) - Oryza sativa (Rice) & (reliability: 328.0) & (original description: Putative TCM_005325, Description = Recombination initiation defects 3, putative isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02264_634585-648506' '(at2g46000 : 141.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mesoderm development candidate 2 (InterPro:IPR019330); Has 31 Blast hits to 31 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative BnaA04g26600D, Description = BnaA04g26600D protein, PFAM = PF10185)' T '35.2' 'not assigned.unknown' 'niben101scf02266_105112-114920' '(at4g00585 : 134.0) unknown protein; Has 47 Blast hits to 47 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 7; Plants - 33; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative At4g00585, Description = Putative uncharacterized protein At4g00585, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02268_370387-378818' '(at4g39900 : 117.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative TCM_001111, Description = Uncharacterized protein isoform 3, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02268_1454045-1456566' '(at3g02910 : 154.0) AIG2-like (avirulence induced gene) family protein; CONTAINS InterPro DOMAIN/s: Butirosin biosynthesis, BtrG-like (InterPro:IPR013024), AIG2-like (InterPro:IPR009288); BEST Arabidopsis thaliana protein match is: AIG2-like (avirulence induced gene) family protein (TAIR:AT5G46720.1); Has 320 Blast hits to 319 proteins in 102 species: Archae - 4; Bacteria - 64; Metazoa - 146; Fungi - 0; Plants - 79; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|39651 : 151.0) no description available & (reliability: 308.0) & (original description: Putative At3g02910, Description = Putative gamma-glutamylcyclotransferase At3g02910, PFAM = PF06094)' T '35.2' 'not assigned.unknown' 'niben101scf02270_91598-94007' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02270_253838-273958' '(at3g20720 : 1283.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (gnl|cdd|38166 : 753.0) no description available & (reliability: 2566.0) & (original description: Putative Os04g0628600, Description = Os04g0628600 protein, PFAM = PF12624)' T '35.2' 'not assigned.unknown' 'niben101scf02270_306785-309363' '(at1g51100 : 186.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative crr41, Description = Chlororespiratory reduction 41, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02271_618157-621274' '(at4g28100 : 375.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 750.0) & (original description: Putative At4g28100, Description = Uncharacterized GPI-anchored protein At4g28100, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02272_256659-266948' '(at2g17350 : 125.0) unknown protein; Has 119 Blast hits to 93 proteins in 40 species: Archae - 0; Bacteria - 3; Metazoa - 18; Fungi - 12; Plants - 44; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative pco108773a, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02272_383799-387762' '(at1g72020 : 95.9) unknown protein; Has 52 Blast hits to 52 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative BnaA07g29820D, Description = BnaA07g29820D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02272_523344-526507' ' no hits & (original description: Putative PGSC0003DMG400031328, Description = , PFAM = PF02428)' T '35.2' 'not assigned.unknown' 'niben101scf02275_294546-301122' '(at5g19400 : 662.0) Encodes SMG7, a protein that possesses an evolutionarily conserved EST1 domain and exhibits strong homology to human SMG6 (EST1A) and SMG7 (EST1C) proteins. SMG7 plays an evolutionarily conserved role in nonsense-mediated RNA decay (NMD). Required for exit from meiosis. Hypomorphic smg7 alleles render mutant plants sterile by causing an unusual cell-cycle arrest in anaphase II that is characterized by delayed chromosome decondensation and aberrant rearrangement of the meiotic spindle. Disruption of SMG7 causes embryonic lethality.; SMG7; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: meiosis, spindle assembly involved in meiosis, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Telomerase activating protein Est1 (InterPro:IPR019458); BEST Arabidopsis thaliana protein match is: Telomerase activating protein Est1 (TAIR:AT1G28260.2). & (gnl|cdd|37373 : 236.0) no description available & (reliability: 1324.0) & (original description: Putative SMG7, Description = Protein SMG7, PFAM = PF10373;PF10374)' T '35.2' 'not assigned.unknown' 'niben101scf02279_327233-329971' ' no hits & (original description: Putative , Description = , PFAM = PF12678)' T '35.2' 'not assigned.unknown' 'niben101scf02279_463187-465651' ' no hits & (original description: Putative PGSC0003DMG400002833, Description = Putative E3 ubiquitin-protein ligase RING1-like, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf02279_779653-787139' '(at5g27990 : 99.4) Pre-rRNA-processing protein TSR2, conserved region; CONTAINS InterPro DOMAIN/s: Pre-rRNA-processing protein TSR2, conserved region (InterPro:IPR019398); BEST Arabidopsis thaliana protein match is: Pre-rRNA-processing protein TSR2, conserved region (TAIR:AT3G22510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39235 : 82.3) no description available & (reliability: 198.8) & (original description: Putative Os08g0508600, Description = Os08g0508600 protein, PFAM = PF10273)' T '35.2' 'not assigned.unknown' 'niben101scf02280_408811-415208' '(at2g40070 : 251.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1); Has 108635 Blast hits to 60786 proteins in 2176 species: Archae - 287; Bacteria - 15142; Metazoa - 39415; Fungi - 26849; Plants - 4416; Viruses - 2864; Other Eukaryotes - 19662 (source: NCBI BLink). & (reliability: 502.0) & (original description: Putative At2g40070, Description = At2g40070, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02280_632738-640544' '(at2g39950 : 317.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 941 Blast hits to 229 proteins in 79 species: Archae - 0; Bacteria - 8; Metazoa - 89; Fungi - 54; Plants - 41; Viruses - 0; Other Eukaryotes - 749 (source: NCBI BLink). & (reliability: 634.0) & (original description: Putative BnaA05g05640D, Description = BnaA05g05640D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02283_141996-144538' ' no hits & (original description: Putative PGSC0003DMG400000106, Description = , PFAM = PF02362)' T '35.2' 'not assigned.unknown' 'niben101scf02285_153482-161571' '(at4g25660 : 329.0) PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT4G25680.1); Has 753 Blast hits to 753 proteins in 154 species: Archae - 0; Bacteria - 0; Metazoa - 205; Fungi - 55; Plants - 348; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink). & (gnl|cdd|35545 : 159.0) no description available & (gnl|cdd|69428 : 128.0) no description available & (reliability: 658.0) & (original description: Putative , Description = Putative deSI-like protein-like, PFAM = PF05903)' T '35.2' 'not assigned.unknown' 'niben101scf02285_161199-163828' '(at4g25690 : 137.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative At4g25670, Description = AT4g25670/L73G19_50, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02285_196247-210787' ' (original description: Putative murC, Description = UDP-N-acetylmuramate--L-alanine ligase, PFAM = PF02875;PF08245;PF01225)' T '35.2' 'not assigned.unknown' 'niben101scf02289_24340-28140' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02289_1106683-1112658' '(at3g29280 : 202.0) unknown protein; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02289_1111397-1114297' '(at3g01060 : 506.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1012.0) & (original description: Putative At3g01060, Description = Homoserine O-acetyltransferase isoform 4, PFAM = PF14234;PF14234)' T '35.2' 'not assigned.unknown' 'niben101scf02290_212339-224679' '(at5g53110 : 354.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G46495.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 708.0) & (original description: Putative At5g53110, Description = Wall-associated receptor kinase and RING-finger domain-containing protein, PFAM = PF13639;PF14380)' T '35.2' 'not assigned.unknown' 'niben101scf02290_522235-527482' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02290_567668-573320' '(at5g53420 : 243.0) CCT motif family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT4G27900.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative COL9, Description = CONSTANS-like 9, PFAM = PF06203)' T '35.2' 'not assigned.unknown' 'niben101scf02292_83695-95622' ' no hits & (original description: Putative PGSC0003DMG400021529, Description = Glycosyl hydrolase family 35 protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02293_341710-347826' '(at4g26450 : 138.0) unknown protein; Has 614 Blast hits to 492 proteins in 137 species: Archae - 0; Bacteria - 94; Metazoa - 255; Fungi - 76; Plants - 69; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02294_382183-385416' '(at2g14110 : 294.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; CONTAINS InterPro DOMAIN/s: HAD-superfamily phosphatase, subfamily IIIC (InterPro:IPR010033), NLI interacting factor (InterPro:IPR004274); Has 332 Blast hits to 325 proteins in 144 species: Archae - 0; Bacteria - 33; Metazoa - 65; Fungi - 121; Plants - 76; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|39749 : 130.0) no description available & (reliability: 588.0) & (original description: Putative pco127416b, Description = Magnesium-dependent phosphatase 1, PFAM = PF12689;PF12689)' T '35.2' 'not assigned.unknown' 'niben101scf02294_407774-416699' '(at4g33630 : 596.0) EXECUTER1 (EX1); FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: response to singlet oxygen; LOCATED IN: thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3506 (InterPro:IPR021894), UvrB/UvrC protein (InterPro:IPR001943); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3506) (TAIR:AT1G27510.1); Has 324 Blast hits to 312 proteins in 85 species: Archae - 0; Bacteria - 8; Metazoa - 98; Fungi - 41; Plants - 94; Viruses - 5; Other Eukaryotes - 78 (source: NCBI BLink). & (reliability: 1192.0) & (original description: Putative EX1, Description = Protein EXECUTER 1, chloroplastic, PFAM = PF12014)' T '35.2' 'not assigned.unknown' 'niben101scf02296_32736-40045' '(at3g27310 : 196.0) encodes a protein that contains a UBX domain and regulates AtCDC48 by inhibiting its ATPase activity and by promoting the disassembly of the active hexamer. Phenotypic analysis of pux1 plants revealed that the loss of PUX1 accelerated the growth of various plant organs including roots and inflorescence shoots. AtCDC48 and SYP31 colocalize at the division plane during cytokinesis and to interact in vitro and in vivo.; plant UBX domain-containing protein 1 (PUX1); CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012); Has 392 Blast hits to 391 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 209; Fungi - 47; Plants - 86; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative PUX1, Description = Plant UBX domain-containing protein 1, PFAM = PF00789)' T '35.2' 'not assigned.unknown' 'niben101scf02297_588659-591183' '(at4g03600 : 121.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative BnaA09g50870D, Description = BnaA09g50870D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02298_289914-298468' '(at1g61740 : 416.0) Sulfite exporter TauE/SafE family protein; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF81 (InterPro:IPR002781); BEST Arabidopsis thaliana protein match is: Sulfite exporter TauE/SafE family protein (TAIR:AT1G11540.1); Has 2571 Blast hits to 2364 proteins in 652 species: Archae - 89; Bacteria - 1424; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 853 (source: NCBI BLink). & (reliability: 832.0) & (original description: Putative BnaA09g13620D, Description = BnaA09g13620D protein, PFAM = PF01925;PF01925)' T '35.2' 'not assigned.unknown' 'niben101scf02300_122245-131201' '(at5g05200 : 750.0) Protein kinase superfamily protein; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G31390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36449 : 363.0) no description available & (gnl|cdd|31005 : 291.0) no description available & (reliability: 1500.0) & (original description: Putative aarF, Description = Kinase, PFAM = PF03109)' T '35.2' 'not assigned.unknown' 'niben101scf02300_177256-180857' '(at5g05180 : 112.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G10880.1); Has 50151 Blast hits to 28081 proteins in 1838 species: Archae - 860; Bacteria - 6013; Metazoa - 25867; Fungi - 3836; Plants - 2236; Viruses - 90; Other Eukaryotes - 11249 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative PGSC0003DMG400022957, Description = BnaA05g37070D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02306_70578-72871' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02306_134917-138719' '(at2g43990 : 104.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; Has 1419 Blast hits to 494 proteins in 144 species: Archae - 0; Bacteria - 300; Metazoa - 246; Fungi - 102; Plants - 31; Viruses - 2; Other Eukaryotes - 738 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02307_285257-288744' '(at4g37420 : 456.0) Domain of unknown function (DUF23); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF23) (TAIR:AT5G40720.1); Has 241 Blast hits to 241 proteins in 76 species: Archae - 0; Bacteria - 129; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85620 : 108.0) no description available & (reliability: 912.0) & (original description: Putative BnaA01g00530D, Description = BnaA01g00530D protein, PFAM = PF01697)' T '35.2' 'not assigned.unknown' 'niben101scf02309_405617-407991' ' no hits & (original description: Putative orf115a, Description = ORF115a, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02312_403653-477354' '(at5g51130 : 289.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: protein methyltransferase activity, methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456), Bicoid-interacting 3 (InterPro:IPR010675); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38110 : 250.0) no description available & (gnl|cdd|70333 : 153.0) no description available & (reliability: 578.0) & (original description: Putative At5g51130, Description = Probable RNA methyltransferase At5g51130, PFAM = PF06859;PF06325)' T '35.2' 'not assigned.unknown' 'niben101scf02312_494747-497142' '(at5g19570 : 129.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0546 (InterPro:IPR018908); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|40028 : 123.0) no description available & (reliability: 258.0) & (original description: Putative At5g19570, Description = Putative uncharacterized protein At5g19570, PFAM = PF10639)' T '35.2' 'not assigned.unknown' 'niben101scf02314_73257-75607' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02316_24200-32994' '(at3g51620 : 480.0) PAP/OAS1 substrate-binding domain superfamily; BEST Arabidopsis thaliana protein match is: nucleotidyltransferases (TAIR:AT3G61690.1); Has 386 Blast hits to 356 proteins in 104 species: Archae - 0; Bacteria - 4; Metazoa - 102; Fungi - 40; Plants - 181; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|37117 : 173.0) no description available & (reliability: 960.0) & (original description: Putative pco079591, Description = Nucleotidyltransferase domain containing protein, expressed, PFAM = PF03828)' T '35.2' 'not assigned.unknown' 'niben101scf02317_161972-164271' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02318_155922-169853' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02319_32571-44554' '(at5g11500 : 313.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF814 (InterPro:IPR008532). & (gnl|cdd|38482 : 259.0) no description available & (gnl|cdd|86914 : 98.3) no description available & (reliability: 626.0) & (original description: Putative CCDC25, Description = Coiled-coil domain-containing protein 25, PFAM = PF05670)' T '35.2' 'not assigned.unknown' 'niben101scf02319_117043-125414' '(at2g25737 : 481.0) Sulfite exporter TauE/SafE family protein; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF81 (InterPro:IPR002781); BEST Arabidopsis thaliana protein match is: Sulfite exporter TauE/SafE family protein (TAIR:AT2G36630.1); Has 3417 Blast hits to 2961 proteins in 724 species: Archae - 129; Bacteria - 1927; Metazoa - 0; Fungi - 0; Plants - 198; Viruses - 0; Other Eukaryotes - 1163 (source: NCBI BLink). & (reliability: 962.0) & (original description: Putative BnaA04g15090D, Description = BnaA04g15090D protein, PFAM = PF01925;PF01925)' T '35.2' 'not assigned.unknown' 'niben101scf02319_584912-587269' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02319_673948-682985' '(at5g11480 : 390.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: barrier septum formation; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein, HSR1-related (InterPro:IPR002917), GTP-binding protein, ribosome biogenesis, YsxC (InterPro:IPR019987); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G22870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37697 : 276.0) no description available & (gnl|cdd|57961 : 217.0) no description available & (reliability: 780.0) & (original description: Putative engB, Description = Probable GTP-binding protein EngB, PFAM = PF01926)' T '35.2' 'not assigned.unknown' 'niben101scf02325_356034-358483' ' no hits & (original description: Putative PGSC0003DMG400043768, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02328_121267-127961' '(at5g19630 : 254.0) alpha/beta-Hydrolases superfamily protein; Has 1062 Blast hits to 1062 proteins in 417 species: Archae - 16; Bacteria - 763; Metazoa - 1; Fungi - 28; Plants - 66; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). & (reliability: 508.0) & (original description: Putative At5g19630, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF02129)' T '35.2' 'not assigned.unknown' 'niben101scf02334_91474-98881' '(at5g41560 : 85.9) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin ligase, Det1/DDB1-complexing (InterPro:IPR018276); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative At5g41560, Description = At5g41560, PFAM = PF10172)' T '35.2' 'not assigned.unknown' 'niben101scf02335_74461-84455' '(at1g64570 : 402.0) DUO POLLEN 3 (DUO3); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057); Has 1836 Blast hits to 1575 proteins in 289 species: Archae - 4; Bacteria - 248; Metazoa - 589; Fungi - 287; Plants - 112; Viruses - 46; Other Eukaryotes - 550 (source: NCBI BLink). & (reliability: 804.0) & (original description: Putative DUO3, Description = DUO pollen 3-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02335_75879-83080' '(at1g64570 : 342.0) DUO POLLEN 3 (DUO3); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057); Has 1836 Blast hits to 1575 proteins in 289 species: Archae - 4; Bacteria - 248; Metazoa - 589; Fungi - 287; Plants - 112; Viruses - 46; Other Eukaryotes - 550 (source: NCBI BLink). & (reliability: 684.0) & (original description: Putative DUO3, Description = 30S ribosomal S5, chloroplastic, PFAM = PF13921)' T '35.2' 'not assigned.unknown' 'niben101scf02335_369177-372463' '(at5g64090 : 344.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hyccin (InterPro:IPR018619); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39886 : 211.0) no description available & (reliability: 688.0) & (original description: Putative At5g64090, Description = At5g64090, PFAM = PF09790)' T '35.2' 'not assigned.unknown' 'niben101scf02335_453506-456114' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02336_63249-66087' ' (original description: Putative CAC1, Description = Cysteine protease CP14, PFAM = PF00396)' T '35.2' 'not assigned.unknown' 'niben101scf02336_130874-135177' '(at1g29240 : 130.0) Protein of unknown function (DUF688); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF688) (TAIR:AT2G34170.2); Has 97 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68662 : 117.0) no description available & (reliability: 260.0) & (original description: Putative , Description = , PFAM = PF05097)' T '35.2' 'not assigned.unknown' 'niben101scf02336_207981-213569' ' no hits & (original description: Putative MYBR14, Description = Putative Myb family transcription factor At1g14600 family, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02338_26796-29155' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02339_45180-64150' '(at4g14615 : 101.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2346 (InterPro:IPR018625); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52825.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative At4g14615, Description = At4g14615, PFAM = PF09803)' T '35.2' 'not assigned.unknown' 'niben101scf02339_159045-171803' '(at3g22990 : 573.0) Armadillo-repeat containing protein. Involved in leaf and flower development. Located in nucleus. Broadly expressed throughout vegetative and floral tissues.; LEAF AND FLOWER RELATED (LFR); FUNCTIONS IN: binding; INVOLVED IN: flower development, leaf development; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); Has 69 Blast hits to 69 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 37; Fungi - 2; Plants - 25; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 1146.0) & (original description: Putative LFR, Description = Armadillo repeat-containing protein LFR, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02339_186155-189317' ' no hits & (original description: Putative , Description = DNA/RNA polymerases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02339_266978-270449' '(at3g22970 : 304.0) Protein of unknown function (DUF506) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT4G14620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68298 : 222.0) no description available & (reliability: 608.0) & (original description: Putative glysoja_028213, Description = Bifunctional DNA-directed RNA polymerase subunit beta-beta, PFAM = PF04720)' T '35.2' 'not assigned.unknown' 'niben101scf02340_293871-298658' '(at2g20760 : 114.0) Clathrin light chain protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin light chain (InterPro:IPR000996); BEST Arabidopsis thaliana protein match is: Clathrin light chain protein (TAIR:AT2G40060.1); Has 1791 Blast hits to 1279 proteins in 282 species: Archae - 0; Bacteria - 563; Metazoa - 557; Fungi - 96; Plants - 161; Viruses - 0; Other Eukaryotes - 414 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative CLC1, Description = Clathrin light chain protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02340_508869-526292' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02340_514687-517407' ' no hits & (original description: Putative , Description = , PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf02340_852647-859841' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02344_410321-413283' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02344_696542-700968' '(gnl|cdd|69613 : 769.0) no description available & (at3g04350 : 723.0) Plant protein of unknown function (DUF946); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF946 (InterPro:IPR009291); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF946) (TAIR:AT5G18490.1); Has 389 Blast hits to 369 proteins in 101 species: Archae - 0; Bacteria - 21; Metazoa - 15; Fungi - 143; Plants - 203; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 1446.0) & (original description: Putative Sb02g037340, Description = Putative uncharacterized protein Sb02g037340, PFAM = PF06101)' T '35.2' 'not assigned.unknown' 'niben101scf02346_233718-238234' '(at1g77710 : 147.0) CONTAINS InterPro DOMAIN/s: Ubiquitin-like, Ufm1 (InterPro:IPR005375); Has 244 Blast hits to 244 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 149; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|29168 : 146.0) no description available & (q94dm8|ufm1_orysa : 143.0) Probable ubiquitin-fold modifier 1 precursor - Oryza sativa (Rice) & (gnl|cdd|38693 : 143.0) no description available & (reliability: 294.0) & (original description: Putative pol, Description = Ubiquitin-fold modifier 1, PFAM = PF03671)' T '35.2' 'not assigned.unknown' 'niben101scf02346_382531-384653' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02346_517928-532105' '(at4g19140 : 172.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative TCM_016676, Description = Uncharacterized protein isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02346_531776-539012' ' no hits & (original description: Putative IPD3, Description = CYCLOPS, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02346_531820-539006' ' no hits & (original description: Putative Rmc, Description = RMC, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02348_485645-492811' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02348_519959-523181' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02348_770619-779213' '(at1g58520 : 511.0) RXW8; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G59406.1); Has 3216 Blast hits to 3174 proteins in 135 species: Archae - 0; Bacteria - 157; Metazoa - 0; Fungi - 2; Plants - 3048; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|36349 : 287.0) no description available & (gnl|cdd|66403 : 161.0) no description available & (reliability: 1022.0) & (original description: Putative R18I, Description = ERD (Early-responsive to dehydration stress) family protein, PFAM = PF13967;PF14703;PF02714)' T '35.2' 'not assigned.unknown' 'niben101scf02348_1139436-1141924' ' (original description: Putative PGSC0003DMG400002055, Description = , PFAM = PF03169)' T '35.2' 'not assigned.unknown' 'niben101scf02350_185476-189828' '(at3g32930 : 306.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 612.0) & (original description: Putative At3g32930, Description = Putative uncharacterized protein At3g32930, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02350_193495-196977' '(gnl|cdd|35341 : 83.2) no description available & (at3g32940 : 81.6) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087); BEST Arabidopsis thaliana protein match is: splicing factor-related (TAIR:AT5G51300.3); Has 1765 Blast hits to 1598 proteins in 251 species: Archae - 0; Bacteria - 25; Metazoa - 867; Fungi - 350; Plants - 198; Viruses - 11; Other Eukaryotes - 314 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative LOC100383283, Description = Putative uncharacterized protein Sb07g001150, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02350_314418-323153' '(at1g11880 : 500.0) transferases, transferring hexosyl groups; FUNCTIONS IN: transferase activity, transferring hexosyl groups; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Mannosyltransferase, PIG-V (InterPro:IPR007315); Has 490 Blast hits to 469 proteins in 237 species: Archae - 6; Bacteria - 111; Metazoa - 123; Fungi - 146; Plants - 40; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|37858 : 274.0) no description available & (gnl|cdd|86571 : 272.0) no description available & (reliability: 1000.0) & (original description: Putative BnaC08g15140D, Description = BnaC08g15140D protein, PFAM = PF04188)' T '35.2' 'not assigned.unknown' 'niben101scf02350_318246-321906' '(at1g11880 : 129.0) transferases, transferring hexosyl groups; FUNCTIONS IN: transferase activity, transferring hexosyl groups; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Mannosyltransferase, PIG-V (InterPro:IPR007315); Has 490 Blast hits to 469 proteins in 237 species: Archae - 6; Bacteria - 111; Metazoa - 123; Fungi - 146; Plants - 40; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|37858 : 87.7) no description available & (gnl|cdd|86571 : 87.3) no description available & (reliability: 258.0) & (original description: Putative AT1G11880, Description = Mannosyltransferase PIG-V, PFAM = PF04188)' T '35.2' 'not assigned.unknown' 'niben101scf02351_72846-75771' ' no hits & (original description: Putative , Description = , PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben101scf02351_510085-519167' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02351_684472-807232' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02351_923322-925618' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf02353_120007-144062' '(at1g17820 : 551.0) Putative integral membrane protein conserved region (DUF2404); FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2404, transmembrane (InterPro:IPR019411), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Putative integral membrane protein conserved region (DUF2404) (TAIR:AT1G73200.1); Has 588 Blast hits to 406 proteins in 156 species: Archae - 0; Bacteria - 7; Metazoa - 150; Fungi - 264; Plants - 48; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (gnl|cdd|37449 : 320.0) no description available & (reliability: 1102.0) & (original description: Putative At1g17820, Description = At1g17820, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02353_613019-626674' '(at3g05070 : 104.0) CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18 (InterPro:IPR013169); Has 292 Blast hits to 292 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi - 83; Plants - 38; Viruses - 11; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|87492 : 83.9) no description available & (reliability: 208.0) & (original description: Putative BnaA03g28930D, Description = BnaA03g28930D protein, PFAM = PF08315)' T '35.2' 'not assigned.unknown' 'niben101scf02354_1233411-1256747' '(at4g32750 : 370.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 740.0) & (original description: Putative BnaC03g66930D, Description = BnaC03g66930D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02356_59355-63914' '(at3g04620 : 142.0) Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein (InterPro:IPR002775), Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related (InterPro:IPR014560); BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein (TAIR:AT1G29250.1); Has 160 Blast hits to 160 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative nab, Description = Nuclear acid binding protein, PFAM = PF01918)' T '35.2' 'not assigned.unknown' 'niben101scf02357_478697-486174' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02357_726842-730613' '(at2g42780 : 176.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684). & (reliability: 352.0) & (original description: Putative PGSC0003DMG400017292, Description = RNA polymerase II transcription factor SIII (Elongin) subunit A, PFAM = PF06881)' T '35.2' 'not assigned.unknown' 'niben101scf02358_156088-166764' '(at4g17150 : 591.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G14290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36765 : 138.0) no description available & (reliability: 1182.0) & (original description: Putative rsc11, Description = Alpha/beta hydrolase fold-1 domain-containing protein, PFAM = PF12146)' T '35.2' 'not assigned.unknown' 'niben101scf02358_172092-184303' '(at3g52155 : 254.0) Phosphoglycerate mutase family protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078); Has 1391 Blast hits to 1391 proteins in 390 species: Archae - 1; Bacteria - 792; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 554 (source: NCBI BLink). & (gnl|cdd|32245 : 93.8) no description available & (reliability: 508.0) & (original description: Putative Sb02g019520, Description = Putative uncharacterized protein Sb02g019520, PFAM = PF00300)' T '35.2' 'not assigned.unknown' 'niben101scf02359_98647-110853' '(at4g30790 : 1131.0) INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 17 (InterPro:IPR007240), Autophagy-related protein 11 (InterPro:IPR019460); Has 8793 Blast hits to 6268 proteins in 570 species: Archae - 89; Bacteria - 657; Metazoa - 4844; Fungi - 808; Plants - 441; Viruses - 15; Other Eukaryotes - 1939 (source: NCBI BLink). & (reliability: 2262.0) & (original description: Putative ATG11, Description = Autophagy-related protein 11, PFAM = PF10377)' T '35.2' 'not assigned.unknown' 'niben101scf02359_155244-163594' '(at2g24100 : 414.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30780.1); Has 101 Blast hits to 101 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 828.0) & (original description: Putative F383_27717, Description = ATP-dependent DNA helicase pcrA, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02360_381519-384003' ' no hits & (original description: Putative , Description = , PFAM = PF12776)' T '35.2' 'not assigned.unknown' 'niben101scf02360_435587-455349' '(at3g49250 : 374.0) Similar to hinge-domain region of structural maintenance of chromosomes (SMC)proteins.Putative chromosome architecture protein that can potentialy link nucleic acids in facilitating an RNA1-mediated epigenetic modification involving secondary siRNA and spreading of DNA methylation.; DEFECTIVE IN MERISTEM SILENCING 3 (DMS3); BEST Arabidopsis thaliana protein match is: gamma-irradiation and mitomycin c induced 1 (TAIR:AT5G24280.1); Has 82 Blast hits to 81 proteins in 17 species: Archae - 6; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 748.0) & (original description: Putative DMS3, Description = Os01g0235200 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02361_342500-465884' '(at4g22920 : 333.0) Similar to the tomato senescence-inducible chloroplast stay-green protein 1. It is upregulated during maximal senescence in the Arabidopsis life cycle, especially in senescent leaves.; NON-YELLOWING 1 (NYE1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chlorophyll catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 666.0) & (original description: Putative SGR, Description = Protein STAY-GREEN, chloroplastic, PFAM = PF12638)' T '35.2' 'not assigned.unknown' 'niben101scf02361_870348-883451' '(at1g76850 : 765.0) Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.; exocyst complex component sec5 (SEC5A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen germination, pollen tube growth; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Exocyst complex component SEC5 (TAIR:AT1G21170.1); Has 532 Blast hits to 503 proteins in 167 species: Archae - 0; Bacteria - 2; Metazoa - 234; Fungi - 147; Plants - 83; Viruses - 4; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|37558 : 361.0) no description available & (reliability: 1530.0) & (original description: Putative BnaA02g17770D, Description = BnaA02g17770D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02362_68144-98403' '(at5g58410 : 837.0) HEAT/U-box domain-containing protein; FUNCTIONS IN: binding, zinc ion binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Armadillo-type fold (InterPro:IPR016024); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36021 : 310.0) no description available & (gnl|cdd|34816 : 186.0) no description available & (reliability: 1674.0) & (original description: Putative v1g200094, Description = Predicted protein, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf02364_141831-149037' '(at5g22340 : 314.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 43 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 628.0) & (original description: Putative At5g22340, Description = At5g22340, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02366_317239-330365' '(gnl|cdd|70188 : 229.0) no description available & (at4g36660 : 202.0) Protein of unknown function (DUF1195); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1195 (InterPro:IPR010608); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1195) (TAIR:AT5G65650.1); Has 67 Blast hits to 67 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative At4g36660, Description = At4g36660, PFAM = PF06708)' T '35.2' 'not assigned.unknown' 'niben101scf02367_556781-560117' ' (original description: Putative TCM_032355, Description = DNA-binding storekeeper protein-related transcriptional regulator, putative, PFAM = PF04504)' T '35.2' 'not assigned.unknown' 'niben101scf02367_577122-579524' ' no hits & (original description: Putative , Description = , PFAM = PF05919)' T '35.2' 'not assigned.unknown' 'niben101scf02370_26986-32737' ' no hits & (original description: Putative , Description = Ubiquitin-binding WIYLD domain protein, PFAM = PF10440)' T '35.2' 'not assigned.unknown' 'niben101scf02370_32738-36715' ' no hits & (original description: Putative , Description = , PFAM = PF10440)' T '35.2' 'not assigned.unknown' 'niben101scf02370_197312-200091' '(at5g53670 : 97.1) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative TER1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf02373_200652-203685' '(at1g78170 : 96.3) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22250.1); Has 66 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative TCM_034911, Description = E3 ubiquitin-protein ligase HUWE1, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02375_156792-159118' ' no hits & (original description: Putative PSRP6, Description = 50S ribosomal protein 6, chloroplastic, PFAM = PF17257)' T '35.2' 'not assigned.unknown' 'niben101scf02375_319928-327359' '(at1g10040 : 419.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G25770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39573 : 266.0) no description available & (gnl|cdd|68625 : 226.0) no description available & (reliability: 838.0) & (original description: Putative At1g10040, Description = Alpha/beta-hydrolases superfamily protein, PFAM = PF05057)' T '35.2' 'not assigned.unknown' 'niben101scf02380_199292-204359' '(at2g40320 : 691.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 33 (TBL33); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 32 (TAIR:AT3G11030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72785 : 196.0) no description available & (reliability: 1382.0) & (original description: Putative TBL33, Description = Protein trichome birefringence-like 33, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf02381_418477-430231' '(at5g38380 : 511.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); Has 109 Blast hits to 107 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 59; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 1022.0) & (original description: Putative At5g38380, Description = Putative uncharacterized protein At5g38380, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02381_439246-444316' '(at1g67080 : 226.0) Encodes a protein involved in the photoprotection of PSII. An aba4-1 mutant completely lacks neoxanthin,a component of the chromophore of the peripheral antenna system in PSII. ABA4 is required for neoxanthin biosynthesis, an intermediary step in abscisic acid biosynthesis, but no catalytic activity has been detected for the ABA4 protein.; abscisic acid (ABA)-deficient 4 (ABA4); INVOLVED IN: abscisic acid biosynthetic process, regulation of superoxide anion generation, xanthophyll metabolic process, photoprotection; LOCATED IN: PSII associated light-harvesting complex II, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 723 Blast hits to 723 proteins in 64 species: Archae - 0; Bacteria - 78; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 587 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative ABA4, Description = Protein ABA DEFICIENT 4, chloroplastic, PFAM = PF14108)' T '35.2' 'not assigned.unknown' 'niben101scf02381_486859-489392' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02381_557432-564122' '(at1g67040 : 207.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26910.3); Has 89 Blast hits to 84 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative PGSC0003DMG400026403, Description = , PFAM = PF14309;PF14383)' T '35.2' 'not assigned.unknown' 'niben101scf02381_562828-565517' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02381_795225-803735' '(at5g38220 : 513.0) alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G66900.1); Has 3656 Blast hits to 3647 proteins in 739 species: Archae - 4; Bacteria - 1133; Metazoa - 617; Fungi - 184; Plants - 295; Viruses - 6; Other Eukaryotes - 1417 (source: NCBI BLink). & (gnl|cdd|36765 : 347.0) no description available & (reliability: 1026.0) & (original description: Putative abhd17c, Description = Protein ABHD17C, PFAM = PF12146)' T '35.2' 'not assigned.unknown' 'niben101scf02383_176166-180408' '(at2g40000 : 468.0) ortholog of sugar beet HS1 PRO-1 2 (HSPRO2); CONTAINS InterPro DOMAIN/s: Hs1pro-1, C-terminal (InterPro:IPR009743), Hs1pro-1, N-terminal (InterPro:IPR009869); BEST Arabidopsis thaliana protein match is: Hs1pro-1 protein (TAIR:AT3G55840.1); Has 71 Blast hits to 71 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|70477 : 398.0) no description available & (reliability: 936.0) & (original description: Putative HSPRO2, Description = Nematode resistance protein-like HSPRO2, PFAM = PF07014;PF07231)' T '35.2' 'not assigned.unknown' 'niben101scf02384_179998-182665' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02385_16459-46812' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02385_205650-208035' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02386_10494-41132' ' no hits & (original description: Putative , Description = , PFAM = PF02892)' T '35.2' 'not assigned.unknown' 'niben101scf02387_11055-24952' '(at5g55060 : 598.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58510.1). & (gnl|cdd|37601 : 388.0) no description available & (reliability: 1196.0) & (original description: Putative BnaA10g09330D, Description = BnaA10g09330D protein, PFAM = PF13890)' T '35.2' 'not assigned.unknown' 'niben101scf02387_282867-291726' '(at5g55040 : 488.0) DNA-binding bromodomain-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G20670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36173 : 161.0) no description available & (gnl|cdd|47625 : 108.0) no description available & (reliability: 976.0) & (original description: Putative glysoja_006393, Description = Bromodomain and PHD finger-containing protein 3, PFAM = PF00439)' T '35.2' 'not assigned.unknown' 'niben101scf02389_98894-106104' '(at2g36630 : 500.0) Sulfite exporter TauE/SafE family protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF81 (InterPro:IPR002781); BEST Arabidopsis thaliana protein match is: Sulfite exporter TauE/SafE family protein (TAIR:AT2G25737.1); Has 1587 Blast hits to 1517 proteins in 484 species: Archae - 83; Bacteria - 808; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 496 (source: NCBI BLink). & (reliability: 1000.0) & (original description: Putative BnaC04g08690D, Description = BnaC04g08690D protein, PFAM = PF01925;PF01925)' T '35.2' 'not assigned.unknown' 'niben101scf02390_131044-195619' '(at2g42780 : 91.7) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684). & (reliability: 183.4) & (original description: Putative BnaA03g19880D, Description = RNA polymerase II transcription factor SIII (Elongin) subunit A, PFAM = PF06881)' T '35.2' 'not assigned.unknown' 'niben101scf02390_308382-311260' ' no hits & (original description: Putative PGSC0003DMG400021282, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02393_226405-230984' ' no hits & (original description: Putative , Description = , PFAM = PF15805;PF15803)' T '35.2' 'not assigned.unknown' 'niben101scf02397_43604-52381' '(at3g10250 : 273.0) Plant protein 1589 of unknown function; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476); BEST Arabidopsis thaliana protein match is: Plant protein 1589 of unknown function (TAIR:AT5G04090.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|88257 : 86.1) no description available & (reliability: 546.0) & (original description: Putative F383_00486, Description = Histidine--tRNA ligase, PFAM = PF09713)' T '35.2' 'not assigned.unknown' 'niben101scf02398_260003-262839' '(at1g70420 : 115.0) Protein of unknown function (DUF1645); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT1G23710.1); Has 179 Blast hits to 179 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 162; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|71256 : 109.0) no description available & (reliability: 230.0) & (original description: Putative F17O7.4, Description = At1g70420/F17O7_4, PFAM = PF07816)' T '35.2' 'not assigned.unknown' 'niben101scf02399_550503-570434' '(at5g22450 : 453.0) unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 906.0) & (original description: Putative TCM_041427, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02399_550957-567647' '(at5g22450 : 268.0) unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative , Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02400_211464-214003' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02400_211725-214207' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02401_1137-7934' '(at3g18215 : 265.0) Protein of unknown function, DUF599; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF599 (InterPro:IPR006747); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF599 (TAIR:AT5G24600.2); Has 303 Blast hits to 303 proteins in 73 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 182; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|68233 : 206.0) no description available & (reliability: 530.0) & (original description: Putative BnaC01g34350D, Description = BnaC01g34350D protein, PFAM = PF04654)' T '35.2' 'not assigned.unknown' 'niben101scf02404_51292-130434' ' (original description: Putative pol, Description = Reverse transcriptase, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf02404_276476-279121' '(at1g66080 : 311.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF775 (InterPro:IPR008493); Has 285 Blast hits to 283 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 120; Fungi - 88; Plants - 50; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|39270 : 169.0) no description available & (reliability: 622.0) & (original description: Putative Sb01g041620, Description = Putative uncharacterized protein Sb01g041620, PFAM = PF05603)' T '35.2' 'not assigned.unknown' 'niben101scf02405_354470-357577' '(at3g56830 : 159.0) Similar in sequence to NPQ6 and NPQ7, but loss of function mutant does not exhibit a nonphotochemical quenching phenotype.; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF565 (InterPro:IPR007572); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF565) (TAIR:AT1G65420.1); Has 154 Blast hits to 154 proteins in 43 species: Archae - 0; Bacteria - 27; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative TCM_046894, Description = Uncharacterized protein isoform 1, PFAM = PF04483)' T '35.2' 'not assigned.unknown' 'niben101scf02405_594976-598654' ' no hits & (original description: Putative , Description = Zinc finger containing preotein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02406_482053-495026' '(at2g15860 : 424.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 110 Blast hits to 109 proteins in 51 species: Archae - 0; Bacteria - 4; Metazoa - 37; Fungi - 10; Plants - 37; Viruses - 3; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 848.0) & (original description: Putative Sb01g008720, Description = Putative uncharacterized protein Sb01g008720, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02406_502299-506547' '(at2g15890 : 191.0) maternal effect embryo arrest 14 (MEE14); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response to fungus, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 56 Blast hits to 56 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative MEE14, Description = CCG-binding protein 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02407_35083-38780' ' no hits & (original description: Putative , Description = CHCH-like protein, PFAM = PF06747)' T '35.2' 'not assigned.unknown' 'niben101scf02407_268964-271272' ' no hits & (original description: Putative glysoja_042698, Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02407_339063-341629' ' no hits & (original description: Putative PGSC0003DMG401031172, Description = PRA1 family protein, PFAM = PF03208)' T '35.2' 'not assigned.unknown' 'niben101scf02407_361275-367696' '(at5g25250 : 535.0) SPFH/Band 7/PHB domain-containing membrane-associated protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT5G25260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37879 : 356.0) no description available & (gnl|cdd|48211 : 94.1) no description available & (reliability: 1070.0) & (original description: Putative FLOT1, Description = Flotillin-like protein 1, PFAM = PF01145)' T '35.2' 'not assigned.unknown' 'niben101scf02407_621650-631113' ' no hits & (original description: Putative PGSC0003DMG400002456, Description = Cysteine-rich extensin-like protein-1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02407_630976-680832' ' no hits & (original description: Putative PGSC0003DMG400002456, Description = Cysteine-rich extensin-like protein-1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02408_12473-31759' '(at3g19220 : 189.0) Encodes a zinc finger protein that is similar to a subgroup of DnaJ and is involved in cotyledon chloroplast biogenesis. Cyo1 is localized to the thylakoid membrane and has protein disulfide isomerase activity in vivo.Cyo1 is more highly expressed in light grown seedlings. Loss of function mutants have albino cotyledons and abnormal plastids.; SNOWY COTYLEDON 2 (SCO2); Has 34 Blast hits to 34 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative SCO2, Description = Protein disulfide-isomerase SCO2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02408_40320-51162' '(at4g34412 : 202.0) CONTAINS InterPro DOMAIN/s: Kinase binding protein CGI-121 (InterPro:IPR013926); Has 275 Blast hits to 275 proteins in 139 species: Archae - 0; Bacteria - 5; Metazoa - 98; Fungi - 109; Plants - 42; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|39269 : 100.0) no description available & (gnl|cdd|72042 : 99.5) no description available & (reliability: 404.0) & (original description: Putative pco063875, Description = PRPK, PFAM = PF08617)' T '35.2' 'not assigned.unknown' 'niben101scf02408_255769-260907' '(at2g15695 : 437.0) Protein of unknown function DUF829, transmembrane 53; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF829, transmembrane 53 (InterPro:IPR008547); BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF829, transmembrane 53 (TAIR:AT5G44250.1); Has 153 Blast hits to 151 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 35; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37732 : 146.0) no description available & (gnl|cdd|69240 : 113.0) no description available & (reliability: 874.0) & (original description: Putative At5g44250, Description = At5g44250, PFAM = PF05705)' T '35.2' 'not assigned.unknown' 'niben101scf02408_270175-273295' ' no hits & (original description: Putative CDKI1, Description = Cyclin-dependent kinase inhibitor 7, PFAM = PF02234)' T '35.2' 'not assigned.unknown' 'niben101scf02408_302489-315390' '(at5g67550 : 114.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71110.1); Has 161 Blast hits to 154 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative PGSC0003DMG400014614, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02413_454046-456970' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02413_529386-534014' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02414_608601-624319' '(at3g12150 : 588.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2048 (InterPro:IPR019149); Has 421 Blast hits to 334 proteins in 155 species: Archae - 2; Bacteria - 147; Metazoa - 215; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|36764 : 425.0) no description available & (reliability: 1176.0) & (original description: Putative MTR_7g092680, Description = Alpha/beta hydrolase family protein, PFAM = PF09752;PF09752)' T '35.2' 'not assigned.unknown' 'niben101scf02416_12791-15018' ' no hits & (original description: Putative PGSC0003DMG400014888, Description = RNase H family protein, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'niben101scf02417_945274-952444' ' no hits & (original description: Putative PGSC0003DMG400019084, Description = Putative ovule protein, PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben101scf02418_67700-76905' '(at4g40050 : 690.0) FUNCTIONS IN: signal transducer activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP013022 (InterPro:IPR016607), Regulator of G protein signalling (InterPro:IPR000342); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3550/UPF0682) (TAIR:AT3G03570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1380.0) & (original description: Putative At4g40050, Description = Putative uncharacterized protein At4g40050, PFAM = PF12070)' T '35.2' 'not assigned.unknown' 'niben101scf02420_64898-76307' '(at5g61450 : 502.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81332 : 100.0) no description available & (reliability: 1004.0) & (original description: Putative At5g61450, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = PF13238)' T '35.2' 'not assigned.unknown' 'niben101scf02420_67960-72798' '(at5g61450 : 290.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|32257 : 83.0) no description available & (reliability: 580.0) & (original description: Putative At5g61450, Description = 2-phosphoglycerate kinase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02420_144399-146569' ' no hits & (original description: Putative At2g35736, Description = Putative uncharacterized protein At2g35736, PFAM = PF15054)' T '35.2' 'not assigned.unknown' 'niben101scf02425_15749-22038' '(at5g35460 : 541.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2838 (InterPro:IPR021261); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38106 : 370.0) no description available & (reliability: 1082.0) & (original description: Putative BnaC04g29620D, Description = BnaC04g29620D protein, PFAM = PF10998)' T '35.2' 'not assigned.unknown' 'niben101scf02425_43439-52528' '(at5g20610 : 697.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26160.1); Has 918 Blast hits to 759 proteins in 180 species: Archae - 6; Bacteria - 105; Metazoa - 264; Fungi - 89; Plants - 167; Viruses - 5; Other Eukaryotes - 282 (source: NCBI BLink). & (reliability: 1394.0) & (original description: Putative BnaC09g37250D, Description = BnaC09g37250D protein, PFAM = PF01476;PF10358)' T '35.2' 'not assigned.unknown' 'niben101scf02425_274598-277338' '(at3g13980 : 142.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54200.1); Has 1485 Blast hits to 418 proteins in 98 species: Archae - 0; Bacteria - 6; Metazoa - 246; Fungi - 61; Plants - 107; Viruses - 6; Other Eukaryotes - 1059 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02426_298534-300848' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02426_375081-381049' ' no hits & (original description: Putative At2g17240, Description = At2g17240/T23A1.10, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02427_202059-204745' ' no hits & (original description: Putative SN1, Description = Snakin-1, PFAM = PF02704)' T '35.2' 'not assigned.unknown' 'niben101scf02427_390005-398062' '(at5g23200 : 445.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 890.0) & (original description: Putative PGSC0003DMG400021516, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02427_403935-411897' ' no hits & (original description: Putative PGSC0003DMG400014888, Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'niben101scf02427_448385-455291' '(at1g27700 : 250.0) Syntaxin/t-SNARE family protein; INVOLVED IN: Golgi vesicle transport, vesicle-mediated transport; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: t-SNARE (InterPro:IPR010989), Syntaxin 6, N-terminal (InterPro:IPR015260); BEST Arabidopsis thaliana protein match is: Syntaxin/t-SNARE family protein (TAIR:AT4G30240.1); Has 134 Blast hits to 133 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87826 : 101.0) no description available & (reliability: 500.0) & (original description: Putative At1g27700, Description = At1g27700/T22C5_14, PFAM = PF09177)' T '35.2' 'not assigned.unknown' 'niben101scf02429_658559-663312' ' no hits & (original description: Putative At4g08230, Description = Glycine-rich protein, PFAM = PF10961)' T '35.2' 'not assigned.unknown' 'niben101scf02429_693382-707073' ' (original description: Putative PBP, Description = Putative uncharacterized protein GT51A1, PFAM = PF00912)' T '35.2' 'not assigned.unknown' 'niben101scf02429_791428-795743' '(at4g08240 : 102.0) unknown protein; Has 33 Blast hits to 33 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative , Description = Histone-lysine N-methyltransferase SUV420H14-20, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02430_617622-620878' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02430_1254982-1266079' '(at5g01750 : 167.0) Protein of unknown function (DUF567); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT3G11740.1); Has 468 Blast hits to 466 proteins in 44 species: Archae - 0; Bacteria - 29; Metazoa - 0; Fungi - 27; Plants - 412; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86676 : 136.0) no description available & (reliability: 334.0) & (original description: Putative At3g11740, Description = Protein LURP-one-related 10, PFAM = PF04525)' T '35.2' 'not assigned.unknown' 'niben101scf02433_379301-401272' '(at4g22190 : 138.0) unknown protein; Has 283 Blast hits to 154 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 24; Fungi - 12; Plants - 48; Viruses - 0; Other Eukaryotes - 197 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative TCM_030308, Description = Serine/arginine repetitive matrix protein 2, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02435_23011-26565' '(at3g19800 : 204.0) Protein of unknown function (DUF177); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF177 (InterPro:IPR003772); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative F383_19649, Description = Putative E3 ubiquitin-protein ligase, PFAM = PF02620)' T '35.2' 'not assigned.unknown' 'niben101scf02435_83052-91398' '(at3g08010 : 474.0) Encodes a chloroplast-localized protein ATAB2. ATAB2 is involved in the biogenesis of Photosystem I and II. ATAB2 has A/U-rich RNA-binding activity and presumably functions as an activator of translation with targets at PS I and PS II.; ATAB2; FUNCTIONS IN: RNA binding; INVOLVED IN: de-etiolation, chloroplast organization, translation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1092 (InterPro:IPR009472); Has 382 Blast hits to 382 proteins in 92 species: Archae - 0; Bacteria - 177; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|69978 : 346.0) no description available & (reliability: 948.0) & (original description: Putative tab2, Description = F17A17.35 protein, PFAM = PF06485)' T '35.2' 'not assigned.unknown' 'niben101scf02435_84124-86846' '(at3g08010 : 172.0) Encodes a chloroplast-localized protein ATAB2. ATAB2 is involved in the biogenesis of Photosystem I and II. ATAB2 has A/U-rich RNA-binding activity and presumably functions as an activator of translation with targets at PS I and PS II.; ATAB2; FUNCTIONS IN: RNA binding; INVOLVED IN: de-etiolation, chloroplast organization, translation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1092 (InterPro:IPR009472); Has 382 Blast hits to 382 proteins in 92 species: Archae - 0; Bacteria - 177; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (gnl|cdd|69978 : 118.0) no description available & (reliability: 344.0) & (original description: Putative ATAB2, Description = F17A17.35 protein, PFAM = PF06485)' T '35.2' 'not assigned.unknown' 'niben101scf02436_560906-563651' ' no hits & (original description: Putative PGSC0003DMG400014798, Description = Uncharacterized protein isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02437_222546-225350' '(atmg00860 : 87.0) hypothetical protein; DNA/RNA polymerases superfamily protein. & (reliability: 174.0) & (original description: Putative Os03g29940, Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02440_187282-190907' '(at4g28590 : 328.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT2G31840.1); Has 114 Blast hits to 112 proteins in 39 species: Archae - 2; Bacteria - 0; Metazoa - 17; Fungi - 6; Plants - 67; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative si486058g10, Description = Thioredoxin family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02441_120208-124923' '(at5g59990 : 88.6) CCT motif family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, stem, leaf whorl, flower; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT5G41380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative COL9, Description = CCT motif family protein, PFAM = PF06203)' T '35.2' 'not assigned.unknown' 'niben101scf02441_469764-472234' '(at5g02640 : 93.2) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02442_79438-83994' ' no hits & (original description: Putative PGSC0003DMG400004782, Description = Lipid transfer-like protein VAS-like isoform 2, PFAM = PF14368)' T '35.2' 'not assigned.unknown' 'niben101scf02442_130638-137816' '(at1g62780 : 230.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 94 Blast hits to 94 proteins in 35 species: Archae - 6; Bacteria - 10; Metazoa - 21; Fungi - 2; Plants - 48; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative CGL27, Description = Putative uncharacterized protein At1g62780, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02444_77808-80497' ' no hits & (original description: Putative glysoja_030340, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02445_1186925-1190726' '(at1g60060 : 237.0) Serine/threonine-protein kinase WNK (With No Lysine)-related; BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase WNK (With No Lysine)-related (TAIR:AT5G53900.2); Has 3565 Blast hits to 2565 proteins in 80 species: Archae - 0; Bacteria - 3; Metazoa - 15; Fungi - 88; Plants - 227; Viruses - 0; Other Eukaryotes - 3232 (source: NCBI BLink). & (reliability: 474.0) & (original description: Putative TCM_033774, Description = Serine/threonine-protein kinase WNK-related isoform 1, PFAM = PF14215)' T '35.2' 'not assigned.unknown' 'niben101scf02450_213038-218594' '(at4g10620 : 693.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G57180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36463 : 444.0) no description available & (gnl|cdd|57926 : 178.0) no description available & (q6ypg5|nos_orysa : 105.0) Putative nitric-oxide synthase (EC 1.14.13.39) - Oryza sativa (Rice) & (reliability: 1386.0) & (original description: Putative BnaA09g22460D, Description = BnaA09g22460D protein, PFAM = PF01926)' T '35.2' 'not assigned.unknown' 'niben101scf02450_350940-358519' '(at5g21140 : 317.0) embryo defective 1379 (emb1379); CONTAINS InterPro DOMAIN/s: Nse1 non-SMC component of SMC5-6 complex (InterPro:IPR011513), Zinc finger, RING-like (InterPro:IPR014857); Has 255 Blast hits to 254 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 91; Fungi - 105; Plants - 49; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|87312 : 132.0) no description available & (reliability: 634.0) & (original description: Putative emb1379, Description = At5g21140, PFAM = PF07574;PF08746)' T '35.2' 'not assigned.unknown' 'niben101scf02450_468626-472058' ' no hits & (original description: Putative , Description = , PFAM = PF01419)' T '35.2' 'not assigned.unknown' 'niben101scf02455_24699-27250' ' no hits & (original description: Putative MVQ5, Description = AtVQ11, PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf02455_145520-148003' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02455_388447-391013' '(at1g15760 : 175.0) Sterile alpha motif (SAM) domain-containing protein; CONTAINS InterPro DOMAIN/s: Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 2 (InterPro:IPR011510); BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G80520.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02455_391239-393387' '(at1g15760 : 175.0) Sterile alpha motif (SAM) domain-containing protein; CONTAINS InterPro DOMAIN/s: Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 2 (InterPro:IPR011510); BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G80520.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 350.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02455_421223-423651' ' no hits & (original description: Putative HM01045, Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02455_426840-429442' '(at1g80520 : 137.0) Sterile alpha motif (SAM) domain-containing protein; CONTAINS InterPro DOMAIN/s: Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 2 (InterPro:IPR011510); BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G15760.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative , Description = , PFAM = PF07647)' T '35.2' 'not assigned.unknown' 'niben101scf02459_1-2626' '(at1g78895 : 199.0) Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT1G16825.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative RTNLB22, Description = Reticulon-like protein B22, PFAM = PF02453)' T '35.2' 'not assigned.unknown' 'niben101scf02459_137091-140018' ' (original description: Putative glysoja_020404, Description = General transcription factor 3C-like protein, PFAM = PF13414)' T '35.2' 'not assigned.unknown' 'niben101scf02459_301801-307661' '(at1g33490 : 226.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2062 (InterPro:IPR018639); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10140.1); Has 88 Blast hits to 88 proteins in 29 species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative Os05g0105500, Description = Os05g0105500 protein, PFAM = PF09835)' T '35.2' 'not assigned.unknown' 'niben101scf02459_343599-346950' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02459_456944-462213' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02459_705721-712685' '(at1g12790 : 261.0) CONTAINS InterPro DOMAIN/s: RuvA domain 2-like (InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 522.0) & (original description: Putative MTR_2g010410, Description = DNA ligase-like protein, PFAM = PF12826)' T '35.2' 'not assigned.unknown' 'niben101scf02459_747321-754856' '(at1g22850 : 280.0) SNARE associated Golgi protein family; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT1G03260.1); Has 4604 Blast hits to 4604 proteins in 1169 species: Archae - 23; Bacteria - 2889; Metazoa - 197; Fungi - 87; Plants - 283; Viruses - 0; Other Eukaryotes - 1125 (source: NCBI BLink). & (gnl|cdd|38350 : 131.0) no description available & (gnl|cdd|30747 : 120.0) no description available & (reliability: 560.0) & (original description: Putative BnaA07g10250D, Description = BnaA07g10250D protein, PFAM = PF09335)' T '35.2' 'not assigned.unknown' 'niben101scf02459_947246-949551' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02459_1133185-1136030' '(gnl|cdd|68247 : 301.0) no description available & (at1g33800 : 299.0) Protein of unknown function (DUF579); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF579 (InterPro:IPR021148), Conserved hypothetical protein CHP01627 (InterPro:IPR006514); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF579) (TAIR:AT4G09990.1); Has 252 Blast hits to 251 proteins in 20 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 240; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 598.0) & (original description: Putative GXM1, Description = Glucuronoxylan 4-O-methyltransferase 1, PFAM = PF04669)' T '35.2' 'not assigned.unknown' 'niben101scf02460_573054-577085' '(at1g72490 : 113.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17400.1); Has 75 Blast hits to 75 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 4; Plants - 58; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02461_451611-934504' ' (original description: Putative LgRT22, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf02461_451617-934372' ' (original description: Putative RT, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf02465_64064-77199' '(at4g11860 : 461.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF544 (InterPro:IPR007518), Ubiquitin interacting motif (InterPro:IPR003903); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF544) (TAIR:AT4G22960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37638 : 202.0) no description available & (gnl|cdd|68015 : 152.0) no description available & (reliability: 922.0) & (original description: Putative Ni, Description = Protein FAM63A, PFAM = PF04424)' T '35.2' 'not assigned.unknown' 'niben101scf02465_69591-73226' '(at4g11860 : 150.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF544 (InterPro:IPR007518), Ubiquitin interacting motif (InterPro:IPR003903); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF544) (TAIR:AT4G22960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative At4g11860, Description = FAM63A-like protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02466_185647-188306' ' no hits & (original description: Putative mt2B, Description = Methallothioneine-like protein, PFAM = PF01439)' T '35.2' 'not assigned.unknown' 'niben101scf02466_223750-229352' '(at5g02390 : 160.0) Protein of unknown function (DUF3741); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative , Description = , PFAM = PF14309)' T '35.2' 'not assigned.unknown' 'niben101scf02466_311095-546379' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf02470_104954-109370' '(at4g33640 : 106.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38586 : 104.0) no description available & (reliability: 212.0) & (original description: Putative cosA, Description = ABRA C-terminal-like protein, PFAM = PF14705)' T '35.2' 'not assigned.unknown' 'niben101scf02471_40495-43565' ' no hits & (original description: Putative PGSC0003DMG400002456, Description = Cysteine-rich extensin-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02471_44234-60753' '(at2g44760 : 535.0) CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF3598 (InterPro:IPR022017); Has 41 Blast hits to 35 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1070.0) & (original description: Putative TCM_005731, Description = Domain of Uncharacterized protein function, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02474_89910-91756' ' (original description: Putative pr10, Description = Major allergen Pru ar, putative, PFAM = PF00407)' T '35.2' 'not assigned.unknown' 'niben101scf02474_91760-93723' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02476_86477-88890' ' no hits & (original description: Putative orf138c, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02480_48882-54522' '(at1g26665 : 169.0) Mediator complex, subunit Med10; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med10 (InterPro:IPR019145); BEST Arabidopsis thaliana protein match is: Mediator complex, subunit Med10 (TAIR:AT5G41910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38256 : 162.0) no description available & (reliability: 338.0) & (original description: Putative MED10B, Description = Mediator of RNA polymerase II transcription subunit 10b, PFAM = PF09748)' T '35.2' 'not assigned.unknown' 'niben101scf02482_30709-33825' '(at2g30395 : 109.0) Member of the plant specific ovate protein family of unknown function.; ovate family protein 17 (OFP17); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06923.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02482_160167-166412' '(at3g51620 : 358.0) PAP/OAS1 substrate-binding domain superfamily; BEST Arabidopsis thaliana protein match is: nucleotidyltransferases (TAIR:AT3G61690.1); Has 386 Blast hits to 356 proteins in 104 species: Archae - 0; Bacteria - 4; Metazoa - 102; Fungi - 40; Plants - 181; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|37117 : 110.0) no description available & (reliability: 716.0) & (original description: Putative pco079591, Description = Nucleotidyltransferase domain containing protein, expressed, PFAM = PF03828)' T '35.2' 'not assigned.unknown' 'niben101scf02482_336923-341284' ' no hits & (original description: Putative PGSC0003DMG400030385, Description = Homeodomain-like protein, PFAM = PF00249)' T '35.2' 'not assigned.unknown' 'niben101scf02485_171563-173871' ' no hits & (original description: Putative orf104, Description = ORF104, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02486_680286-682393' ' no hits & (original description: Putative psaI, Description = Photosystem I reaction center subunit VIII, PFAM = PF00796)' T '35.2' 'not assigned.unknown' 'niben101scf02486_922560-924892' ' no hits & (original description: Putative LTI6A, Description = Hydrophobic protein LTI6A, PFAM = PF01679)' T '35.2' 'not assigned.unknown' 'niben101scf02486_942595-944920' ' no hits & (original description: Putative RCI2B, Description = Hydrophobic protein RCI2B, PFAM = PF01679)' T '35.2' 'not assigned.unknown' 'niben101scf02487_264124-283463' '(at5g03900 : 634.0) Iron-sulphur cluster biosynthesis family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FeS cluster biogenesis (InterPro:IPR000361); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1268.0) & (original description: Putative At5g03900, Description = Uncharacterized protein At5g03900, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02494_712250-714759' '(at1g21280 : 98.2) CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative , Description = , PFAM = PF03732;PF14244)' T '35.2' 'not assigned.unknown' 'niben101scf02494_910590-913354' '(at5g62280 : 170.0) Protein of unknown function (DUF1442); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1442 (InterPro:IPR009902); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1442) (TAIR:AT2G45360.1); Has 92 Blast hits to 92 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70732 : 85.9) no description available & (reliability: 340.0) & (original description: Putative , Description = , PFAM = PF07279)' T '35.2' 'not assigned.unknown' 'niben101scf02494_1001582-1004347' '(at5g62280 : 152.0) Protein of unknown function (DUF1442); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1442 (InterPro:IPR009902); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1442) (TAIR:AT2G45360.1); Has 92 Blast hits to 92 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70732 : 93.2) no description available & (reliability: 304.0) & (original description: Putative , Description = , PFAM = PF07279)' T '35.2' 'not assigned.unknown' 'niben101scf02494_1090532-1095446' '(at1g12380 : 838.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62870.1); Has 173 Blast hits to 170 proteins in 34 species: Archae - 0; Bacteria - 4; Metazoa - 25; Fungi - 8; Plants - 123; Viruses - 7; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 1676.0) & (original description: Putative PGSC0003DMG400031021, Description = Ribonuclease H-like domain-containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02494_1170705-1173092' ' no hits & (original description: Putative , Description = , PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf02497_211394-216343' ' no hits & (original description: Putative Os02g0640200, Description = Os02g0640200 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02499_377662-381217' '(at5g16460 : 283.0) Putative adipose-regulatory protein (Seipin); CONTAINS InterPro DOMAIN/s: Adipose-regulatory protein, Seipin (InterPro:IPR009617); BEST Arabidopsis thaliana protein match is: Putative adipose-regulatory protein (Seipin) (TAIR:AT2G34380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|87152 : 150.0) no description available & (gnl|cdd|39401 : 139.0) no description available & (reliability: 566.0) & (original description: Putative SEI1, Description = Seipin-1, PFAM = PF06775)' T '35.2' 'not assigned.unknown' 'niben101scf02500_160997-167068' '(at3g12685 : 154.0) Acid phosphatase/vanadium-dependent haloperoxidase-related protein; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: Acid phosphatase/vanadium-dependent haloperoxidase-related protein (TAIR:AT1G24350.1); Has 1099 Blast hits to 1099 proteins in 402 species: Archae - 0; Bacteria - 719; Metazoa - 0; Fungi - 0; Plants - 229; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|32146 : 88.8) no description available & (reliability: 308.0) & (original description: Putative At3g12685, Description = Acid phosphatase/vanadium-dependent haloperoxidase-related protein, PFAM = PF02681)' T '35.2' 'not assigned.unknown' 'niben101scf02502_12871-15272' ' no hits & (original description: Putative PGSC0003DMG400028186, Description = SAUR-like auxin-responsive protein family, putative, PFAM = PF02519)' T '35.2' 'not assigned.unknown' 'niben101scf02502_337886-346731' '(at2g36895 : 280.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 32 Blast hits to 32 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02502_1159591-1167092' '(at2g36680 : 201.0) Modifier of rudimentary (Mod(r)) protein; LOCATED IN: ESCRT I complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Modifier of rudimentary, Modr (InterPro:IPR009851); BEST Arabidopsis thaliana protein match is: Modifier of rudimentary (Mod(r)) protein (TAIR:AT3G53120.1); Has 81 Blast hits to 81 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|87233 : 132.0) no description available & (gnl|cdd|38480 : 128.0) no description available & (reliability: 402.0) & (original description: Putative IDP343, Description = Modifier of rudimentary (Mod(R)) protein, PFAM = PF07200)' T '35.2' 'not assigned.unknown' 'niben101scf02502_1517761-1526026' '(at5g03795 : 507.0) Exostosin family protein; LOCATED IN: membrane; EXPRESSED IN: embryo, sepal, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT3G07620.1); Has 1413 Blast hits to 1401 proteins in 109 species: Archae - 0; Bacteria - 9; Metazoa - 310; Fungi - 4; Plants - 989; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (gnl|cdd|36239 : 315.0) no description available & (gnl|cdd|66673 : 212.0) no description available & (reliability: 1014.0) & (original description: Putative At5g03795, Description = Probable glycosyltransferase At5g03795, PFAM = PF03016)' T '35.2' 'not assigned.unknown' 'niben101scf02503_144550-150866' '(at1g28240 : 671.0) Protein of unknown function (DUF616); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF616 (InterPro:IPR006852); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF616) (TAIR:AT1G53040.2); Has 322 Blast hits to 322 proteins in 41 species: Archae - 14; Bacteria - 34; Metazoa - 0; Fungi - 4; Plants - 225; Viruses - 1; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|68342 : 469.0) no description available & (reliability: 1342.0) & (original description: Putative BnaA09g27430D, Description = BnaA09g27430D protein, PFAM = PF04765)' T '35.2' 'not assigned.unknown' 'niben101scf02507_213934-217319' ' no hits & (original description: Putative , Description = , PFAM = PF07762)' T '35.2' 'not assigned.unknown' 'niben101scf02508_138477-142228' ' no hits & (original description: Putative PGSC0003DMG400008629, Description = Asparagine--tRNA ligase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02508_463012-465692' ' (original description: Putative oomtA, Description = 8-hydroxyquercetin 8-O-methyltransferase, PFAM = PF08100;PF00891)' T '35.2' 'not assigned.unknown' 'niben101scf02509_229799-240048' '(at3g08490 : 210.0) BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein, group 2 (TAIR:AT3G24600.1); Has 161 Blast hits to 158 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 420.0) & (original description: Putative BnaC01g39500D, Description = BnaC01g39500D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02509_1358714-1366174' '(at4g25315 : 119.0) Expressed protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3128 (InterPro:IPR021475). & (reliability: 238.0) & (original description: Putative BnaC01g17260D, Description = BnaC01g17260D protein, PFAM = PF11326)' T '35.2' 'not assigned.unknown' 'niben101scf02510_343547-346037' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02511_615172-620543' '(at5g24130 : 297.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 594.0) & (original description: Putative At5g24130, Description = At5g24130, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02513_317515-319760' ' (original description: Putative TCM_001682, Description = SAUR family protein, PFAM = PF02519)' T '35.2' 'not assigned.unknown' 'niben101scf02513_342385-343889' ' no hits & (original description: Putative orf155, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02513_1062821-1065947' ' (original description: Putative PGSC0003DMG400036651, Description = , PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'niben101scf02513_1229579-1232226' ' (original description: Putative rps1, Description = Ribosomal protein S1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02514_112505-114979' ' no hits & (original description: Putative PGSC0003DMG400014342, Description = Heavy metal-associated domain protein, putative, PFAM = PF00403)' T '35.2' 'not assigned.unknown' 'niben101scf02517_405983-414842' '(at1g48110 : 207.0) evolutionarily conserved C-terminal region 7 (ECT7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 6 (TAIR:AT3G17330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37112 : 100.0) no description available & (reliability: 414.0) & (original description: Putative ECT7, Description = YTH domain family protein 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02517_884365-896024' '(at2g30700 : 513.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G61900.1); Has 68 Blast hits to 67 proteins in 13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1026.0) & (original description: Putative At1g61900, Description = Putative GPI-anchored protein At1g61900 family, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02517_1020893-1086230' '(at1g05960 : 318.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Uncharacterized protein (TAIR:AT2G41830.1); Has 335 Blast hits to 327 proteins in 101 species: Archae - 0; Bacteria - 6; Metazoa - 143; Fungi - 47; Plants - 128; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37088 : 196.0) no description available & (reliability: 636.0) & (original description: Putative umc2615, Description = BnaC04g02200D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02517_1140492-1143190' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Retrovirus-related Pol polyprotein LINE-1, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf02517_1878849-1881656' ' no hits & (original description: Putative , Description = Copper transport protein family, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02522_188526-192013' '(at1g13340 : 235.0) Regulator of Vps4 activity in the MVB pathway protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061); BEST Arabidopsis thaliana protein match is: Regulator of Vps4 activity in the MVB pathway protein (TAIR:AT1G34220.2); Has 628 Blast hits to 628 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 164; Fungi - 130; Plants - 284; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|37238 : 189.0) no description available & (gnl|cdd|67036 : 117.0) no description available & (reliability: 470.0) & (original description: Putative Sb01g010490, Description = Putative uncharacterized protein Sb01g010490, PFAM = PF03398)' T '35.2' 'not assigned.unknown' 'niben101scf02525_90065-92595' '(gnl|cdd|68427 : 238.0) no description available & (at2g31160 : 228.0) LIGHT SENSITIVE HYPOCOTYLS 3 (LSH3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT1G07090.1); Has 309 Blast hits to 309 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative LSH3, Description = Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3, PFAM = PF04852)' T '35.2' 'not assigned.unknown' 'niben101scf02525_396876-409594' ' no hits & (original description: Putative , Description = , PFAM = PF05938)' T '35.2' 'not assigned.unknown' 'niben101scf02525_804293-806760' ' no hits & (original description: Putative PGSC0003DMG400042837, Description = Embryo sac development arrest 6, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02527_173647-176189' '(at4g12340 : 96.3) copper ion binding; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative Os05g0103500, Description = Os05g0103500 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02530_241187-246966' ' (original description: Putative speA, Description = Arginine decarboxylase, PFAM = PF03711;PF01276)' T '35.2' 'not assigned.unknown' 'niben101scf02530_520301-525382' ' (original description: Putative speA, Description = Arginine decarboxylase, PFAM = PF03711;PF01276)' T '35.2' 'not assigned.unknown' 'niben101scf02531_311194-313865' ' no hits & (original description: Putative , Description = , PFAM = PF07939)' T '35.2' 'not assigned.unknown' 'niben101scf02533_56438-58809' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02534_47376-87452' '(at1g79190 : 1253.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 200 Blast hits to 184 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 76; Fungi - 76; Plants - 39; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|39724 : 84.7) no description available & (reliability: 2506.0) & (original description: Putative , Description = Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02538_509617-514207' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02540_185760-192251' '(at4g30200 : 234.0) Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.; vernalization5/VIN3-like (VEL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vegetative to reproductive phase transition of meristem; LOCATED IN: PcG protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423, plant (InterPro:IPR004082), Fibronectin, type III-like fold (InterPro:IPR008957), Fibronectin, type III (InterPro:IPR003961); BEST Arabidopsis thaliana protein match is: Fibronectin type III domain-containing protein (TAIR:AT5G57380.1). & (reliability: 468.0) & (original description: Putative VEL1, Description = BnaC03g12980D protein, PFAM = PF07227)' T '35.2' 'not assigned.unknown' 'niben101scf02541_895515-899053' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02543_19207-21770' ' (original description: Putative ERF1, Description = Ethylene response factor ERF1, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'niben101scf02543_231436-241313' '(at5g63540 : 443.0) Encodes RMI1. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates.; RECQ MEDIATED INSTABILITY 1 (RMI1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: meiosis, double-strand break repair via homologous recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, inflorescence meristem, sperm cell, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1767 (InterPro:IPR013894); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF1767) (TAIR:AT5G19950.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 886.0) & (original description: Putative RMI1, Description = BLM-associated protein of 75 kDa homolog, PFAM = PF08585;PF16099)' T '35.2' 'not assigned.unknown' 'niben101scf02543_324825-327916' ' no hits & (original description: Putative , Description = DNA/RNA polymerases superfamily protein, PFAM = PF03732)' T '35.2' 'not assigned.unknown' 'niben101scf02543_324834-328378' ' no hits & (original description: Putative , Description = , PFAM = PF00098;PF03732)' T '35.2' 'not assigned.unknown' 'niben101scf02543_325560-328261' ' no hits & (original description: Putative , Description = , PFAM = PF00098)' T '35.2' 'not assigned.unknown' 'niben101scf02543_325959-328998' ' no hits & (original description: Putative , Description = DNA/RNA polymerases superfamily protein, PFAM = PF00098;PF08284;PF08284)' T '35.2' 'not assigned.unknown' 'niben101scf02543_327985-330771' ' no hits & (original description: Putative , Description = DNA/RNA polymerases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02543_328336-331585' ' no hits & (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02544_109998-116508' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02547_189629-193750' '(at5g06240 : 190.0) embryo defective 2735 (emb2735); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 380.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02548_458398-478209' '(at2g35610 : 952.0) xyloglucanase 113 (XEG113); CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT1G70630.1); Has 390 Blast hits to 386 proteins in 36 species: Archae - 0; Bacteria - 6; Metazoa - 3; Fungi - 0; Plants - 336; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 1904.0) & (original description: Putative XEG113, Description = Arabinosyltransferase XEG113, PFAM = PF03407)' T '35.2' 'not assigned.unknown' 'niben101scf02548_758585-761330' ' no hits & (original description: Putative GA23811, Description = Dead Box protein Dhh1p, PFAM = PF02162;PF02162)' T '35.2' 'not assigned.unknown' 'niben101scf02549_291130-313840' '(at2g43950 : 390.0) Constitutes a peptide sensitive ion channel in chloroplast outer membranes. Accumulates in germinating seeds and developing embryos.; chloroplast outer envelope protein 37 (OEP37); FUNCTIONS IN: ion channel activity; INVOLVED IN: cation transport; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast inner membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 780.0) & (original description: Putative OEP37, Description = Outer envelope pore protein 37, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02552_89053-91537' '(at1g55265 : 146.0) Protein of unknown function, DUF538; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT5G19860.1); Has 529 Blast hits to 529 proteins in 37 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 0; Plants - 516; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|86647 : 96.5) no description available & (reliability: 292.0) & (original description: Putative TCM_040161, Description = Uncharacterized protein isoform 1, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben101scf02552_361248-368967' '(at1g76020 : 222.0) Thioredoxin superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G20225.1); Has 151 Blast hits to 149 proteins in 52 species: Archae - 0; Bacteria - 54; Metazoa - 12; Fungi - 4; Plants - 51; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 444.0) & (original description: Putative Sb06g003190, Description = Putative uncharacterized protein Sb06g003190, PFAM = PF13462)' T '35.2' 'not assigned.unknown' 'niben101scf02553_344988-349960' '(at5g11680 : 301.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WW-domain-binding protein (InterPro:IPR018826); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38504 : 150.0) no description available & (reliability: 602.0) & (original description: Putative MTR_8g070860, Description = Arabinogalactan protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02555_70495-75909' '(at1g27210 : 340.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G59850.1); Has 516 Blast hits to 439 proteins in 115 species: Archae - 2; Bacteria - 40; Metazoa - 93; Fungi - 74; Plants - 195; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (reliability: 680.0) & (original description: Putative At1g27210, Description = Armadillo/beta-catenin-like repeat-containing protein, PFAM = PF02985;PF12765)' T '35.2' 'not assigned.unknown' 'niben101scf02558_113644-116129' ' no hits & (original description: Putative PGSC0003DMG400007296, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02560_17184-20257' ' no hits & (original description: Putative At3g15395, Description = AT3G15395 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02562_75643-84643' '(at4g30620 : 199.0) Uncharacterised BCR, YbaB family COG0718; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0133 (InterPro:IPR004401); BEST Arabidopsis thaliana protein match is: Uncharacterised BCR, YbaB family COG0718 (TAIR:AT2G24020.2); Has 1854 Blast hits to 1854 proteins in 759 species: Archae - 0; Bacteria - 1576; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative ybaB, Description = Nucleoid-associated protein ybaB, PFAM = PF02575)' T '35.2' 'not assigned.unknown' 'niben101scf02562_377993-383353' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02562_382411-384746' ' no hits & (original description: Putative , Description = , PFAM = PF05617)' T '35.2' 'not assigned.unknown' 'niben101scf02562_384292-386648' ' no hits & (original description: Putative At5g36657, Description = Putative egg cell-secreted protein 1.2-like, PFAM = PF05617)' T '35.2' 'not assigned.unknown' 'niben101scf02563_310657-313148' '(at3g50685 : 137.0) unknown protein; Has 52 Blast hits to 46 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative BnaC05g05900D, Description = BnaA06g04680D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02564_336170-338790' '(at4g37810 : 90.9) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative EPFL2, Description = EPIDERMAL PATTERNING FACTOR-like protein 2, PFAM = PF17181)' T '35.2' 'not assigned.unknown' 'niben101scf02564_445563-449232' '(at1g10020 : 556.0) Protein of unknown function (DUF1005); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1005 (InterPro:IPR010410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1005) (TAIR:AT4G29310.1); Has 158 Blast hits to 158 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 6; Plants - 144; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|69725 : 242.0) no description available & (reliability: 1112.0) & (original description: Putative At4g29310, Description = Putative uncharacterized protein AT4g29310, PFAM = PF06219)' T '35.2' 'not assigned.unknown' 'niben101scf02564_921604-923930' ' no hits & (original description: Putative PSRP6, Description = 50S ribosomal protein 6, chloroplastic, PFAM = PF17257)' T '35.2' 'not assigned.unknown' 'niben101scf02564_1031223-1055828' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf02565_191386-193955' ' (original description: Putative PGSC0003DMG400008173, Description = , PFAM = PF03140)' T '35.2' 'not assigned.unknown' 'niben101scf02566_113127-115639' '(at2g25770 : 186.0) Polyketide cyclase/dehydrase and lipid transport superfamily protein; CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT4G32870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative , Description = , PFAM = PF10604)' T '35.2' 'not assigned.unknown' 'niben101scf02568_51026-53613' ' no hits & (original description: Putative PGSC0003DMG400014888, Description = RNase H family protein, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'niben101scf02569_201665-204414' '(gnl|cdd|70732 : 262.0) no description available & (at2g45360 : 231.0) Protein of unknown function (DUF1442); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1442 (InterPro:IPR009902); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1442) (TAIR:AT3G60780.1); Has 113 Blast hits to 112 proteins in 16 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF07279)' T '35.2' 'not assigned.unknown' 'niben101scf02569_409053-413479' '(at1g62870 : 984.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12380.1); Has 351 Blast hits to 343 proteins in 42 species: Archae - 2; Bacteria - 0; Metazoa - 27; Fungi - 5; Plants - 299; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 1968.0) & (original description: Putative At1g12380, Description = F5O11.10, PFAM = PF04937)' T '35.2' 'not assigned.unknown' 'niben101scf02571_134261-137433' '(at1g16770 : 338.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 103 Blast hits to 103 proteins in 50 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 65; Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 676.0) & (original description: Putative BnaC08g17050D, Description = BnaC08g17050D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02572_152770-155462' '(at3g27750 : 159.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: Vacuolar sorting protein 9 (VPS9) domain (TAIR:AT5G09320.1); Has 106 Blast hits to 106 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative At3g27750, Description = Protein EMBRYO DEFECTIVE 3123, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02572_196903-202275' '(at3g16200 : 673.0) unknown protein; Has 97 Blast hits to 97 proteins in 15 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 1346.0) & (original description: Putative BnaA05g23490D, Description = BnaA05g23490D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02572_361206-364282' ' no hits & (original description: Putative , Description = , PFAM = PF12734)' T '35.2' 'not assigned.unknown' 'niben101scf02572_375173-378003' '(at1g64980 : 409.0) Nucleotide-diphospho-sugar transferases superfamily protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 703 Blast hits to 703 proteins in 58 species: Archae - 0; Bacteria - 90; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 4; Other Eukaryotes - 564 (source: NCBI BLink). & (reliability: 818.0) & (original description: Putative CDI, Description = Protein CDI, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02573_217-7585' ' no hits & (original description: Putative PGSC0003DMG400000595, Description = 1-aminocyclopropane-1-carboxylate oxidase 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02573_44800-47186' ' no hits & (original description: Putative PGSC0003DMG402016214, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02573_125589-130222' '(at5g65400 : 268.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37762 : 183.0) no description available & (reliability: 536.0) & (original description: Putative At5g65400, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF03959)' T '35.2' 'not assigned.unknown' 'niben101scf02573_192359-194880' '(at2g01755 : 130.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 120 Blast hits to 120 proteins in 52 species: Archae - 0; Bacteria - 80; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative PGSC0003DMG400026859, Description = Putative uncharacterized protein At2g01755, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02581_10230-16227' '(at5g20165 : 110.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1242 (InterPro:IPR009653). & (gnl|cdd|87170 : 86.1) no description available & (reliability: 220.0) & (original description: Putative ksh, Description = Protein kish, PFAM = PF06842)' T '35.2' 'not assigned.unknown' 'niben101scf02581_49827-53028' '(at3g23760 : 253.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: transferases, transferring glycosyl groups (TAIR:AT4G14100.1); Has 108 Blast hits to 104 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative At4g14100, Description = Uncharacterized protein At4g14100, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02581_59897-62481' '(at5g51040 : 100.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF339 (InterPro:IPR005631). & (reliability: 200.0) & (original description: Putative SDHAF2, Description = (+)-neomenthol dehydrogenase, PFAM = PF03937)' T '35.2' 'not assigned.unknown' 'niben101scf02582_73669-87603' '(at3g44600 : 1090.0) Cyclophilin71 is a WD40 domain cyclophilin, which functions in gene repression, organogenesis and meristem development. CYP71 physically interacts with histone H3.; cyclophilin71 (CYP71); CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT2G36130.1); Has 19122 Blast hits to 18688 proteins in 2726 species: Archae - 110; Bacteria - 7959; Metazoa - 3135; Fungi - 1772; Plants - 1406; Viruses - 0; Other Eukaryotes - 4740 (source: NCBI BLink). & (gnl|cdd|36100 : 798.0) no description available & (gnl|cdd|29398 : 299.0) no description available & (p21569|cyph_maize : 141.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Zea mays (Maize) & (reliability: 2180.0) & (original description: Putative CYP71, Description = Peptidyl-prolyl cis-trans isomerase CYP71, PFAM = PF00400;PF00400;PF00160)' T '35.2' 'not assigned.unknown' 'niben101scf02589_537243-539752' ' (original description: Putative PGSC0003DMG400047259, Description = , PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'niben101scf02589_544217-547150' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02589_545193-548063' ' (original description: Putative , Description = , PFAM = PF08646)' T '35.2' 'not assigned.unknown' 'niben101scf02593_48198-65303' '(at1g27530 : 335.0) CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-fold modifier-conjugating enzyme 1 (InterPro:IPR014806); Has 269 Blast hits to 269 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (gnl|cdd|38567 : 296.0) no description available & (gnl|cdd|87601 : 281.0) no description available & (reliability: 670.0) & (original description: Putative ufc1, Description = Ubiquitin-fold modifier-conjugating enzyme 1, PFAM = PF08694)' T '35.2' 'not assigned.unknown' 'niben101scf02595_485269-501877' '(at4g24460 : 347.0) Encodes one of the CRT-Like transporters (CLT1/AT5G19380, CLT2/AT4G24460, CLT3/AT5G12170). Required for glutathione homeostasis and stress responses. Mutants lacking these transporters are heavy metal-sensitive, glutathione(GSH)-deficient, and hypersensitive to Phytophthora infection.; CRT (chloroquine-resistance transporter)-like transporter 2 (CLT2); CONTAINS InterPro DOMAIN/s: Chloroquine resistance transporter related (InterPro:IPR013936); BEST Arabidopsis thaliana protein match is: CRT (chloroquine-resistance transporter)-like transporter 3 (TAIR:AT5G12170.2). & (reliability: 694.0) & (original description: Putative CLT2, Description = Protein CLT2, chloroplastic, PFAM = PF08627)' T '35.2' 'not assigned.unknown' 'niben101scf02597_308291-316788' ' no hits & (original description: Putative , Description = , PFAM = PF07723;PF00646)' T '35.2' 'not assigned.unknown' 'niben101scf02601_591563-593922' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02602_199606-211186' '(at4g27500 : 319.0) interacts with H+-ATPase, and regulates its activity; proton pump interactor 1 (PPI1); FUNCTIONS IN: protein binding; INVOLVED IN: regulation of proton transport; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36690.1); Has 56187 Blast hits to 35171 proteins in 2461 species: Archae - 533; Bacteria - 11472; Metazoa - 20772; Fungi - 6196; Plants - 2564; Viruses - 257; Other Eukaryotes - 14393 (source: NCBI BLink). & (reliability: 638.0) & (original description: Putative Sb02g022570, Description = Putative uncharacterized protein Sb02g022570, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02605_261451-263738' ' no hits & (original description: Putative Sb06g029890, Description = Putative uncharacterized protein Sb06g029890, PFAM = PF12609)' T '35.2' 'not assigned.unknown' 'niben101scf02606_359842-368351' ' no hits & (original description: Putative Sb01g035210, Description = Putative uncharacterized protein Sb01g035210, PFAM = PF12752;PF01424)' T '35.2' 'not assigned.unknown' 'niben101scf02606_493062-513438' ' (original description: Putative AGL71, Description = BnaC09g52890D protein, PFAM = PF00319)' T '35.2' 'not assigned.unknown' 'niben101scf02606_537591-541979' '(at2g48070 : 214.0) Encodes a chloroplast protein RPH1 (resistance to Phytophthora 1). Involved in immune response to Phytophthora brassicae. rph1 mutant plants (in Ws background) are susceptible to P. brassicae.; RESISTANCE TO PHYTOPHTHORA 1 (RPH1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response to oomycetes, positive regulation of hydrogen peroxide biosynthetic process; LOCATED IN: plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages. & (reliability: 428.0) & (original description: Putative RPH1, Description = Resistance to phytophthora 1 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02608_154353-158078' ' no hits & (original description: Putative YCF37, Description = Synechocystis YCF37-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02610_10818-16003' '(at1g70750 : 223.0) Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT5G16720.1); Has 8718 Blast hits to 6591 proteins in 581 species: Archae - 113; Bacteria - 587; Metazoa - 3699; Fungi - 664; Plants - 753; Viruses - 66; Other Eukaryotes - 2836 (source: NCBI BLink). & (gnl|cdd|68159 : 115.0) no description available & (reliability: 446.0) & (original description: Putative Os03g0708700, Description = Os03g0708700 protein, PFAM = PF04576)' T '35.2' 'not assigned.unknown' 'niben101scf02610_102741-106968' '(at1g70780 : 155.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 143 Blast hits to 143 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative BnaC08g06180D, Description = BnaC08g06180D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02613_566755-570563' ' no hits & (original description: Putative Ccrd_009956, Description = Barwin-like endoglucanase, PFAM = PF03330)' T '35.2' 'not assigned.unknown' 'niben101scf02620_145385-153516' ' (original description: Putative PGSC0003DMG400003558, Description = Peroxidase, PFAM = PF00141;PF00141)' T '35.2' 'not assigned.unknown' 'niben101scf02621_85825-88016' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02621_223048-239785' '(at4g33780 : 136.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: short hypocotyl in white light1 (TAIR:AT1G69935.1); Has 40 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative At4g33780, Description = Putative uncharacterized protein At4g33780, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02621_322039-329362' '(at2g20980 : 368.0) Similar to MCM10, which in other organism was shown to be involved in the initiation of DNA replication.; minichromosome maintenance 10 (MCM10); CONTAINS InterPro DOMAIN/s: Zinc finger, Mcm10/DnaG-type (InterPro:IPR015408); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38266 : 158.0) no description available & (reliability: 736.0) & (original description: Putative MCM10, Description = Minichromosome maintenance protein 10, PFAM = PF09329)' T '35.2' 'not assigned.unknown' 'niben101scf02622_750772-1139462' ' no hits & (original description: Putative glysoja_007451, Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = PF13650)' T '35.2' 'not assigned.unknown' 'niben101scf02622_922012-926714' '(at5g04520 : 473.0) Protein of unknown function DUF455; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF455 (InterPro:IPR007402), Protein of unknown function UCP012318 (InterPro:IPR011197); BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF455 (TAIR:AT1G06240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86607 : 382.0) no description available & (reliability: 946.0) & (original description: Putative An14g01760, Description = Aspergillus niger contig An14c0080, genomic contig, PFAM = PF04305)' T '35.2' 'not assigned.unknown' 'niben101scf02622_1062707-1067037' ' no hits & (original description: Putative PGSC0003DMG402027350, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02622_1195744-1197974' ' (original description: Putative ATP9, Description = ATP synthase subunit 9, mitochondrial, PFAM = PF00137)' T '35.2' 'not assigned.unknown' 'niben101scf02622_1296127-1300034' '(at5g04550 : 581.0) Protein of unknown function (DUF668); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700), Protein of unknown function DUF3475 (InterPro:IPR021864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT3G23160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68572 : 128.0) no description available & (reliability: 1162.0) & (original description: Putative PGSC0003DMG400027319, Description = BnaAnng08110D protein, PFAM = PF11961;PF05003)' T '35.2' 'not assigned.unknown' 'niben101scf02625_285133-291727' '(at4g24750 : 272.0) Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT3G08920.1); Has 333 Blast hits to 333 proteins in 88 species: Archae - 9; Bacteria - 119; Metazoa - 0; Fungi - 0; Plants - 160; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 544.0) & (original description: Putative STR11, Description = Rhodanese-like domain-containing protein 11, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02626_70943-77378' '(at4g15790 : 84.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 411 Blast hits to 380 proteins in 121 species: Archae - 4; Bacteria - 107; Metazoa - 85; Fungi - 29; Plants - 59; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative BnaC01g22270D, Description = BnaC01g22270D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02626_333962-451724' '(at5g24860 : 127.0) encodes a small protein of 12.6 kDa that regulates flowering and is involved in gibberellin signalling pathway. It is expressed in apical meristems immediately after the photoperiodic induction of flowering. Genetic interactions with flowering time and floral organ identity genes suggest that this gene may be involved in modulating the competence to flower. There are two other genes similar to FPF1, FLP1 (At4g31380) and FLP2 (no locus name yet, on BAC F8F16 on chr 4). This is so far a plant-specific gene and is only found in long-day mustard, arabidopsis, and rice.; FLOWERING PROMOTING FACTOR 1 (FPF1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to gibberellin stimulus, positive regulation of flower development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10625.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative RAA1, Description = Flowering-promoting factor 1-like protein 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02626_935718-938266' '(at3g03280 : 140.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17350.1); Has 137 Blast hits to 137 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative , Description = , PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf02627_31564-34058' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02627_239163-241022' ' no hits & (original description: Putative , Description = , PFAM = PF04520)' T '35.2' 'not assigned.unknown' 'niben101scf02631_180546-184114' '(at2g15560 : 481.0) Putative endonuclease or glycosyl hydrolase; BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT3G62200.1); Has 355 Blast hits to 333 proteins in 56 species: Archae - 0; Bacteria - 12; Metazoa - 73; Fungi - 48; Plants - 215; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|86646 : 153.0) no description available & (reliability: 962.0) & (original description: Putative At2g15560, Description = At2g15560, PFAM = PF12872;PF12872;PF01936)' T '35.2' 'not assigned.unknown' 'niben101scf02632_29598-32413' '(at5g23100 : 248.0) Protein of unknown function, DUF617; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF617, plant (InterPro:IPR006460); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF617 (TAIR:AT3G25640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68336 : 224.0) no description available & (reliability: 496.0) & (original description: Putative MIZ1, Description = BnaA06g33470D protein, PFAM = PF04759)' T '35.2' 'not assigned.unknown' 'niben101scf02632_638095-654782' ' no hits & (original description: Putative Zm.54174, Description = BSD domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02634_379198-383682' '(at3g54290 : 332.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haemerythrin/HHE cation-binding motif (InterPro:IPR012312); Has 59 Blast hits to 59 proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 664.0) & (original description: Putative , Description = , PFAM = PF01814)' T '35.2' 'not assigned.unknown' 'niben101scf02634_510474-513328' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02636_258795-261202' ' no hits & (original description: Putative PGSC0003DMG400042112, Description = , PFAM = PF13960)' T '35.2' 'not assigned.unknown' 'niben101scf02636_423192-437271' '(at1g22060 : 801.0) LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G22000.1); Has 84739 Blast hits to 38714 proteins in 2257 species: Archae - 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706; Plants - 4675; Viruses - 308; Other Eukaryotes - 18553 (source: NCBI BLink). & (gnl|cdd|35383 : 112.0) no description available & (reliability: 1602.0) & (original description: Putative BnaC05g17370D, Description = ATP binding protein, putative, PFAM = PF10358)' T '35.2' 'not assigned.unknown' 'niben101scf02636_556785-559024' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02636_860855-865464' ' no hits & (original description: Putative , Description = , PFAM = PF00646)' T '35.2' 'not assigned.unknown' 'niben101scf02639_349408-354888' ' no hits & (original description: Putative , Description = , PFAM = PF11069)' T '35.2' 'not assigned.unknown' 'niben101scf02639_356997-360094' '(at2g39370 : 145.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37380.1); Has 184 Blast hits to 178 proteins in 53 species: Archae - 0; Bacteria - 58; Metazoa - 9; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative MAKR4, Description = Probable membrane-associated kinase regulator 4, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02647_398266-401195' '(at2g05310 : 121.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13500.1); Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative PGSC0003DMG400018833, Description = At4g13500, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02648_181786-184979' ' no hits & (original description: Putative Sb07g024120, Description = Putative uncharacterized protein Sb07g024120, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02650_106859-122146' '(at1g15780 : 310.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). & (reliability: 620.0) & (original description: Putative MED15A, Description = Coactivator CBP, KIX domain-containing protein, PFAM = PF16987)' T '35.2' 'not assigned.unknown' 'niben101scf02652_103185-125022' '(at4g22830 : 142.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2499 (InterPro:IPR019634). & (reliability: 284.0) & (original description: Putative At4g22830, Description = Putative uncharacterized protein At4g22830, PFAM = PF10693)' T '35.2' 'not assigned.unknown' 'niben101scf02652_159131-165736' '(at4g22850 : 315.0) SNARE associated Golgi protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT4G12000.1); Has 1376 Blast hits to 1373 proteins in 368 species: Archae - 4; Bacteria - 671; Metazoa - 94; Fungi - 36; Plants - 289; Viruses - 0; Other Eukaryotes - 282 (source: NCBI BLink). & (gnl|cdd|87885 : 82.1) no description available & (reliability: 630.0) & (original description: Putative BnaC01g14290D, Description = BnaC01g14290D protein, PFAM = PF09335)' T '35.2' 'not assigned.unknown' 'niben101scf02652_174442-176648' ' no hits & (original description: Putative , Description = Zinc finger containing preotein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02653_631716-635074' '(gnl|cdd|66792 : 195.0) no description available & (at3g50120 : 162.0) Plant protein of unknown function (DUF247); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50170.1); Has 1189 Blast hits to 1046 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1189; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative PGSC0003DMG400010632, Description = , PFAM = PF03140)' T '35.2' 'not assigned.unknown' 'niben101scf02654_1-3176' '(at1g55790 : 225.0) FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Copper transport protein family (TAIR:AT3G20180.1). & (gnl|cdd|39376 : 199.0) no description available & (reliability: 450.0) & (original description: Putative Sb02g027770, Description = Putative uncharacterized protein Sb02g027770, PFAM = PF10354)' T '35.2' 'not assigned.unknown' 'niben101scf02654_3788-7774' '(at1g55790 : 216.0) FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Copper transport protein family (TAIR:AT3G20180.1). & (gnl|cdd|39376 : 207.0) no description available & (reliability: 432.0) & (original description: Putative Sb02g027770, Description = Putative uncharacterized protein Sb02g027770, PFAM = PF10354)' T '35.2' 'not assigned.unknown' 'niben101scf02655_188342-190725' ' (original description: Putative ltp, Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'niben101scf02655_242461-244835' ' (original description: Putative ltp, Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'niben101scf02657_66352-69315' ' no hits & (original description: Putative PGSC0003DMG400001033, Description = , PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'niben101scf02657_236460-241147' '(at2g23790 : 309.0) Protein of unknown function (DUF607); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF607 (InterPro:IPR006769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF607) (TAIR:AT4G36820.1); Has 364 Blast hits to 364 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 147; Fungi - 45; Plants - 131; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|38177 : 273.0) no description available & (gnl|cdd|68256 : 212.0) no description available & (reliability: 618.0) & (original description: Putative PGSC0003DMG400029177, Description = PPR containing plant-like protein, PFAM = PF04678)' T '35.2' 'not assigned.unknown' 'niben101scf02658_31551-40559' '(at5g47900 : 383.0) Protein of unknown function (DUF1624); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1624 (InterPro:IPR012429); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1624) (TAIR:AT5G27730.1). & (gnl|cdd|39881 : 322.0) no description available & (gnl|cdd|34021 : 128.0) no description available & (reliability: 766.0) & (original description: Putative gpm184, Description = Heparan-alpha-glucosaminide N-acetyltransferase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02659_296461-297679' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02659_296791-300071' '(at1g58120 : 303.0) BEST Arabidopsis thaliana protein match is: methyltransferases (TAIR:AT5G01710.1); Has 93 Blast hits to 93 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 606.0) & (original description: Putative T18I24.4, Description = Putative uncharacterized protein T18I24.4, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02660_548218-554579' '(at3g22810 : 394.0) FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pleckstrin-like, plant (InterPro:IPR013666), Protein of unknown function DUF828 (InterPro:IPR008546), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region (TAIR:AT4G14740.2); Has 431 Blast hits to 261 proteins in 42 species: Archae - 3; Bacteria - 14; Metazoa - 18; Fungi - 2; Plants - 219; Viruses - 0; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|71887 : 170.0) no description available & (reliability: 788.0) & (original description: Putative VAB, Description = VAN3-binding protein, PFAM = PF05703;PF08458)' T '35.2' 'not assigned.unknown' 'niben101scf02662_1-9162' '(at1g04390 : 378.0) BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); Has 143 Blast hits to 130 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 756.0) & (original description: Putative , Description = , PFAM = PF00651)' T '35.2' 'not assigned.unknown' 'niben101scf02662_490-3282' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02662_60914-66535' '(at1g16520 : 328.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56080.1); Has 243 Blast hits to 234 proteins in 69 species: Archae - 2; Bacteria - 2; Metazoa - 61; Fungi - 9; Plants - 125; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative At4g15545, Description = Uncharacterized protein At4g15545, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02663_24781-30017' '(at5g22340 : 320.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 43 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 640.0) & (original description: Putative At5g22340, Description = At5g22340, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02663_40845-54997' '(at3g44330 : 718.0) INVOLVED IN: protein processing; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicalin (InterPro:IPR016574), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Nicastrin (InterPro:IPR008710); Has 245 Blast hits to 243 proteins in 99 species: Archae - 6; Bacteria - 10; Metazoa - 139; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|37737 : 583.0) no description available & (reliability: 1436.0) & (original description: Putative Sb07g000320, Description = Nicalin, PFAM = PF05450)' T '35.2' 'not assigned.unknown' 'niben101scf02663_93773-126096' '(at5g22350 : 619.0) ELONGATED MITOCHONDRIA 1 (ELM1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1022 (InterPro:IPR009367); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1022) (TAIR:AT5G06180.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69763 : 393.0) no description available & (reliability: 1238.0) & (original description: Putative ELM1, Description = Mitochondrial fission protein ELM1, PFAM = PF06258)' T '35.2' 'not assigned.unknown' 'niben101scf02665_1470273-1474716' '(gnl|cdd|70178 : 241.0) no description available & (at3g08600 : 206.0) Protein of unknown function (DUF1191); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1191 (InterPro:IPR010605); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1191) (TAIR:AT4G22900.1); Has 124 Blast hits to 124 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative duf, Description = DUF1191 superfamily protein, PFAM = PF06697)' T '35.2' 'not assigned.unknown' 'niben101scf02668_36302-54244' '(at5g13470 : 93.2) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02668_154589-159311' ' no hits & (original description: Putative , Description = RecA-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02668_179137-185332' ' no hits & (original description: Putative HCF153, Description = AT4g31560, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02674_1-3941' ' no hits & (original description: Putative PGSC0003DMG400030244, Description = , PFAM = PF14383)' T '35.2' 'not assigned.unknown' 'niben101scf02679_213043-242517' '(at5g16520 : 687.0) unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1374.0) & (original description: Putative At5g16520, Description = At5g16520, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02679_268804-274712' ' no hits & (original description: Putative , Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02681_198684-201694' ' no hits & (original description: Putative kis1, Description = CDK/cyclin inhibitor, PFAM = PF02234)' T '35.2' 'not assigned.unknown' 'niben101scf02690_126353-129759' '(at3g57400 : 272.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52500.1); Has 38 Blast hits to 38 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 544.0) & (original description: Putative BnaC04g24230D, Description = BnaC04g24230D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02693_60148-62528' '(at4g02090 : 95.1) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 132 Blast hits to 132 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative , Description = , PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf02693_339858-358660' '(at4g02030 : 899.0) Vps51/Vps67 family (components of vesicular transport) protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps51/Vps67 (InterPro:IPR014812). & (gnl|cdd|37557 : 290.0) no description available & (reliability: 1798.0) & (original description: Putative cl754_1a, Description = Putative vacuolar protein sorting-associated protein 51-like, PFAM = PF08700)' T '35.2' 'not assigned.unknown' 'niben101scf02694_354988-363147' '(at1g73320 : 334.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G08125.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38004 : 113.0) no description available & (reliability: 668.0) & (original description: Putative glysoja_047512, Description = Methyltransferase-like protein 21D, PFAM = PF10294)' T '35.2' 'not assigned.unknown' 'niben101scf02694_621645-630103' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02694_638232-645243' '(at5g67550 : 196.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71110.1); Has 161 Blast hits to 154 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative PGSC0003DMG400014614, Description = Os11g0264500 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02694_662455-676173' '(at2g32980 : 378.0) unknown protein; Has 158 Blast hits to 154 proteins in 73 species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 756.0) & (original description: Putative 37469, Description = AUGMIN subunit 2, PFAM = PF15003)' T '35.2' 'not assigned.unknown' 'niben101scf02694_676174-683501' '(at3g07565 : 175.0) Protein of unknown function (DUF3755); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3755 (InterPro:IPR022228); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3755) (TAIR:AT1G10820.2). & (reliability: 350.0) & (original description: Putative DRIF2, Description = DIV and RAD interacting factor 2, PFAM = PF12579)' T '35.2' 'not assigned.unknown' 'niben101scf02699_1-33246' '(at2g48060 : 2856.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, sperm cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341 proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa - 318; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|37104 : 365.0) no description available & (reliability: 5712.0) & (original description: Putative Sb03g018910, Description = Putative uncharacterized protein Sb03g018910, PFAM = PF12166)' T '35.2' 'not assigned.unknown' 'niben101scf02699_331939-338340' '(at4g02920 : 226.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03340.1); Has 41 Blast hits to 41 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative PGSC0003DMG400003799, Description = BnaC02g26780D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02700_277333-300267' '(gnl|cdd|69161 : 302.0) no description available & (at1g03610 : 261.0) Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT4G03420.1); Has 266 Blast hits to 262 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 263; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 522.0) & (original description: Putative At4g03420, Description = Putative uncharacterized protein AT4g03420, PFAM = PF05623)' T '35.2' 'not assigned.unknown' 'niben101scf02700_301849-304186' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02705_36188-55852' '(at2g43630 : 144.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, nucleus, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G59640.2); Has 67 Blast hits to 67 proteins in 20 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 1; Plants - 49; Viruses - 2; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative , Description = Chloroplast, nucleus, chloroplast envelope, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02705_181798-186029' '(at4g17010 : 87.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative PGSC0003DMG400026249, Description = Os02g0494600 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02706_353097-356131' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02706_395232-397977' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02706_402676-407368' '(at4g32090 : 80.9) Beta-1,3-N-Acetylglucosaminyltransferase family protein; FUNCTIONS IN: galactosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Beta-1,3-N-Acetylglucosaminyltransferase family protein (TAIR:AT4G32105.1); Has 97 Blast hits to 96 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative PGSC0003DMG400004421, Description = Beta-1,3-N-acetylglucosaminyltransferase family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02706_454033-457451' ' no hits & (original description: Putative PGSC0003DMG400008341, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02706_519558-530841' '(at2g25280 : 449.0) CONTAINS InterPro DOMAIN/s: UPF0103/Mediator of ErbB2-driven cell motility (Memo), related (InterPro:IPR002737); Has 1074 Blast hits to 1072 proteins in 474 species: Archae - 213; Bacteria - 366; Metazoa - 159; Fungi - 135; Plants - 54; Viruses - 0; Other Eukaryotes - 147 (source: NCBI BLink). & (gnl|cdd|38296 : 429.0) no description available & (gnl|cdd|85736 : 239.0) no description available & (reliability: 898.0) & (original description: Putative memo1, Description = Protein MEMO1 homolog, PFAM = PF01875)' T '35.2' 'not assigned.unknown' 'niben101scf02707_14897-17307' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02709_11989-17496' '(at4g15802 : 107.0) Encodes a protein with similarity to heat shock factor binding proteins. Involved in negative regulation of heat shock response. Becomes nuclear localized upon heat treatment.; heat shock factor binding protein (HSBP); CONTAINS InterPro DOMAIN/s: Heat shock factor binding 1 (InterPro:IPR009643); Has 319 Blast hits to 319 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 183; Fungi - 14; Plants - 74; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative HSBP, Description = At4g15810, PFAM = PF06825)' T '35.2' 'not assigned.unknown' 'niben101scf02709_309804-315613' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02710_53697-57556' '(at4g01935 : 245.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 37 Blast hits to 37 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 490.0) & (original description: Putative Os01g0252600, Description = Os01g0252600 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02710_53726-57467' '(at4g01935 : 158.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 37 Blast hits to 37 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative At4g01935, Description = BnaA07g26660D protein, PFAM = PF07281)' T '35.2' 'not assigned.unknown' 'niben101scf02710_53861-57568' '(at4g01935 : 273.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 37 Blast hits to 37 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 546.0) & (original description: Putative Os01g0252600, Description = Os01g0252600 protein, PFAM = PF07281)' T '35.2' 'not assigned.unknown' 'niben101scf02710_128253-136014' '(at4g01995 : 234.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative , Description = , PFAM = PF13225)' T '35.2' 'not assigned.unknown' 'niben101scf02714_88263-91847' ' no hits & (original description: Putative APC13, Description = Anaphase-promoting complex subunit 13, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02720_66197-68649' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02720_437912-462206' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02720_865498-868673' ' (original description: Putative erf, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'niben101scf02721_578029-584476' '(gnl|cdd|69860 : 224.0) no description available & (at2g32580 : 192.0) Protein of unknown function (DUF1068); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1068 (InterPro:IPR010471); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1068) (TAIR:AT1G05070.1). & (gnl|cdd|37034 : 142.0) no description available & (reliability: 384.0) & (original description: Putative At1g05070, Description = At1g05070/T7A14_6, PFAM = PF06364)' T '35.2' 'not assigned.unknown' 'niben101scf02723_64181-67245' '(at1g27461 : 219.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02725_442167-444493' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02730_82231-86924' '(at3g55250 : 311.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 46 Blast hits to 46 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 622.0) & (original description: Putative Sb01g008440, Description = Putative uncharacterized protein Sb01g008440, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02730_219859-223884' '(at3g01450 : 328.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G14790.1); Has 261 Blast hits to 260 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 10; Plants - 111; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|38144 : 263.0) no description available & (reliability: 656.0) & (original description: Putative , Description = Heparan-alpha-glucosaminide N-acetyltransferase, PFAM = PF12348)' T '35.2' 'not assigned.unknown' 'niben101scf02731_22652-25314' '(at4g17870 : 258.0) Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.; PYRABACTIN RESISTANCE 1 (PYR1); FUNCTIONS IN: abscisic acid binding; INVOLVED IN: abscisic acid mediated signaling pathway, regulation of protein phosphatase type 2c activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis thaliana protein match is: PYR1-like 1 (TAIR:AT5G46790.1); Has 389 Blast hits to 389 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 389; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 516.0) & (original description: Putative PYR1, Description = Abscisic acid receptor PYR1, PFAM = PF10604)' T '35.2' 'not assigned.unknown' 'niben101scf02734_5795-13792' '(at4g31010 : 420.0) RNA-binding CRS1 / YhbY (CRM) domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain-containing protein (TAIR:AT5G54890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 840.0) & (original description: Putative Sb07g004760, Description = Putative uncharacterized protein Sb07g004760, PFAM = PF01985)' T '35.2' 'not assigned.unknown' 'niben101scf02735_81137-83628' ' no hits & (original description: Putative , Description = Putative F-box domain containing protein, identical, PFAM = PF07734)' T '35.2' 'not assigned.unknown' 'niben101scf02738_38427-57091' '(at5g15900 : 449.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 19 (TBL19); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 21 (TAIR:AT5G15890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|72785 : 120.0) no description available & (reliability: 898.0) & (original description: Putative AXY4L, Description = Leaf senescence protein-like, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf02738_88406-92126' '(at1g61600 : 300.0) Protein of unknown function (DUF1262); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1262 (InterPro:IPR010683); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1262) (TAIR:AT1G13540.1); Has 103 Blast hits to 96 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70353 : 251.0) no description available & (reliability: 600.0) & (original description: Putative T25B24.5, Description = T25B24.5 protein, PFAM = PF06880)' T '35.2' 'not assigned.unknown' 'niben101scf02738_243040-250237' '(at5g38720 : 157.0) unknown protein; Has 13419 Blast hits to 9093 proteins in 698 species: Archae - 38; Bacteria - 1038; Metazoa - 4949; Fungi - 1086; Plants - 485; Viruses - 44; Other Eukaryotes - 5779 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative PGSC0003DMG400010100, Description = Ribosomal RNA-processing protein, PFAM = PF12923)' T '35.2' 'not assigned.unknown' 'niben101scf02738_256863-259468' ' no hits & (original description: Putative PGSC0003DMG400001534, Description = AT3g02480/F16B3_11, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02740_331688-334227' '(at3g03280 : 130.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17350.1); Has 137 Blast hits to 137 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative , Description = , PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf02740_460700-467233' '(at5g38200 : 646.0) Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: glutamine metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Peptidase C26 (InterPro:IPR011697), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT1G66860.1); Has 3533 Blast hits to 3529 proteins in 1172 species: Archae - 17; Bacteria - 2871; Metazoa - 1; Fungi - 3; Plants - 53; Viruses - 0; Other Eukaryotes - 588 (source: NCBI BLink). & (gnl|cdd|73285 : 180.0) no description available & (reliability: 1292.0) & (original description: Putative At5g38200, Description = Class I glutamine amidotransferase-like protein, PFAM = PF07722)' T '35.2' 'not assigned.unknown' 'niben101scf02740_633919-644008' '(at5g38220 : 444.0) alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G66900.1); Has 3656 Blast hits to 3647 proteins in 739 species: Archae - 4; Bacteria - 1133; Metazoa - 617; Fungi - 184; Plants - 295; Viruses - 6; Other Eukaryotes - 1417 (source: NCBI BLink). & (gnl|cdd|36765 : 349.0) no description available & (reliability: 888.0) & (original description: Putative abhd17c, Description = Alpha/beta hydrolase domain-containing protein 17C, PFAM = PF12146)' T '35.2' 'not assigned.unknown' 'niben101scf02749_30486-32857' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02749_586183-588783' ' no hits & (original description: Putative glysoja_048695, Description = Linoleate 9S-lipoxygenase-4, PFAM = PF04570)' T '35.2' 'not assigned.unknown' 'niben101scf02750_1418-6219' ' no hits & (original description: Putative Sb01g015010, Description = Putative uncharacterized protein Sb01g015010, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02750_457327-461545' '(at5g07960 : 131.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0139 (InterPro:IPR005351); Has 193 Blast hits to 193 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|38672 : 98.6) no description available & (gnl|cdd|67295 : 95.1) no description available & (reliability: 262.0) & (original description: Putative KK1_001967, Description = UPF0139 membrane protein At5g07960 family, PFAM = PF03669)' T '35.2' 'not assigned.unknown' 'niben101scf02750_464509-467067' ' no hits & (original description: Putative gag-pol, Description = Mutant gag-pol polyprotein, PFAM = PF03732)' T '35.2' 'not assigned.unknown' 'niben101scf02751_437124-440315' '(at3g53010 : 306.0) Domain of unknown function (DUF303) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF303, acetylesterase putative (InterPro:IPR005181); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF303) (TAIR:AT4G34215.2); Has 339 Blast hits to 339 proteins in 106 species: Archae - 2; Bacteria - 221; Metazoa - 0; Fungi - 1; Plants - 86; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|86388 : 88.5) no description available & (reliability: 612.0) & (original description: Putative At4g34215, Description = Probable carbohydrate esterase At4g34215, PFAM = PF03629)' T '35.2' 'not assigned.unknown' 'niben101scf02751_775043-777996' '(at1g78110 : 166.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22230.1); Has 5452 Blast hits to 3541 proteins in 289 species: Archae - 4; Bacteria - 165; Metazoa - 1756; Fungi - 532; Plants - 205; Viruses - 141; Other Eukaryotes - 2649 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative At1g78110, Description = At1g78110, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02752_179370-181708' '(at5g09270 : 83.2) unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative PGSC0003DMG400022672, Description = Putative uncharacterized protein At5g09270, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02752_1030543-1032880' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02752_1324878-1331435' '(at4g15563 : 147.0) unknown protein; Has 36 Blast hits to 36 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative PGSC0003DMG400022660, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02755_321905-325344' '(at5g58960 : 464.0) Mutant plants display impaired light-regulation of the hypocotyl randomization response.; GRAVITROPIC IN THE LIGHT (GIL1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF641) (TAIR:AT2G45260.1); Has 292 Blast hits to 290 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 282; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|68434 : 111.0) no description available & (reliability: 928.0) & (original description: Putative GIL1, Description = Os03g0825600 protein, PFAM = PF04859)' T '35.2' 'not assigned.unknown' 'niben101scf02757_165621-169212' '(at2g20080 : 82.8) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative Os05g0559300, Description = Os05g0559300 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02763_177022-182218' '(at5g20635 : 80.9) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: keratin filament, chloroplast; CONTAINS InterPro DOMAIN/s: Keratin, high sulphur B2 protein (InterPro:IPR002494); Has 6153 Blast hits to 2882 proteins in 265 species: Archae - 6; Bacteria - 47; Metazoa - 4777; Fungi - 68; Plants - 187; Viruses - 30; Other Eukaryotes - 1038 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative AGG3, Description = AtAGG3, PFAM = PF00631)' T '35.2' 'not assigned.unknown' 'niben101scf02763_538560-547032' '(at2g06005 : 325.0) Encodes one of the FRI interacting proteins: FRIGIDA INTERACTING PROTEIN 1 (FIP1)/At2g06005, FIP2/ At4g17060. FRI (At4G00650) is a major determinant of natural variation in Arabidopsis flowering time.; FRIGIDA interacting protein 1 (FIP1); FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G20580.2); Has 283 Blast hits to 279 proteins in 95 species: Archae - 0; Bacteria - 30; Metazoa - 98; Fungi - 20; Plants - 56; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (reliability: 650.0) & (original description: Putative FIP1, Description = FRIGIDA interacting protein 1, PFAM = PF14802)' T '35.2' 'not assigned.unknown' 'niben101scf02763_637935-640822' '(at1g64870 : 170.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G45200.1); Has 99 Blast hits to 91 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative PGSC0003DMG400046394, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02764_111555-113928' ' (original description: Putative D19H, Description = Late embryogenesis abundant protein B19.1A, PFAM = PF00477)' T '35.2' 'not assigned.unknown' 'niben101scf02764_658880-662744' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02766_212487-218669' '(at1g05370 : 463.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT3G22410.1); Has 487 Blast hits to 487 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 189; Plants - 251; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|36683 : 217.0) no description available & (gnl|cdd|47819 : 87.7) no description available & (reliability: 926.0) & (original description: Putative BnaC05g30180D, Description = BnaC05g30180D protein, PFAM = PF00650)' T '35.2' 'not assigned.unknown' 'niben101scf02772_344261-352976' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02772_381566-384058' ' no hits & (original description: Putative glysoja_007451, Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = PF13650)' T '35.2' 'not assigned.unknown' 'niben101scf02772_649926-678203' '(at1g67140 : 869.0) SWEETIE (SWEETIE); FUNCTIONS IN: binding; INVOLVED IN: trehalose metabolic process, carbohydrate metabolic process, starch metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024). & (gnl|cdd|37033 : 168.0) no description available & (reliability: 1738.0) & (original description: Putative , Description = HEAT repeat-containing protein isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02772_728656-731751' '(at1g13340 : 167.0) Regulator of Vps4 activity in the MVB pathway protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061); BEST Arabidopsis thaliana protein match is: Regulator of Vps4 activity in the MVB pathway protein (TAIR:AT1G34220.2); Has 628 Blast hits to 628 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 164; Fungi - 130; Plants - 284; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|37238 : 152.0) no description available & (gnl|cdd|67036 : 109.0) no description available & (reliability: 334.0) & (original description: Putative PGSC0003DMG400012655, Description = Regulator of Vps4 activity in the MVB pathway protein, PFAM = PF03398)' T '35.2' 'not assigned.unknown' 'niben101scf02774_111176-113568' '(at5g17190 : 164.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative BnaC03g33360D, Description = BnaC03g33360D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02778_312746-324879' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02786_2152-5844' '(at1g61415 : 134.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G61450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative BnaCnng22150D, Description = BnaCnng22150D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02786_4053-5757' ' no hits & (original description: Putative glysoja_006153, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02786_105060-115161' '(at1g73930 : 848.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1630 (InterPro:IPR012860); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|71232 : 554.0) no description available & (gnl|cdd|37643 : 542.0) no description available & (reliability: 1696.0) & (original description: Putative Sb01g040520, Description = Putative uncharacterized protein Sb01g040520, PFAM = PF08616)' T '35.2' 'not assigned.unknown' 'niben101scf02786_395125-397784' '(at1g49000 : 97.1) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18560.1); Has 105 Blast hits to 105 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative PGSC0003DMG400004055, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02790_580373-583237' '(at2g28230 : 151.0) TATA-binding related factor (TRF) of subunit 20 of Mediator complex; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med20 (InterPro:IPR013921); BEST Arabidopsis thaliana protein match is: TATA-binding related factor (TRF) of subunit 20 of Mediator complex (TAIR:AT4G09070.1); Has 80 Blast hits to 80 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|87577 : 83.4) no description available & (reliability: 302.0) & (original description: Putative Med20, Description = Mediator of RNA polymerase II transcription subunit 20b, PFAM = PF08612)' T '35.2' 'not assigned.unknown' 'niben101scf02790_587280-591500' '(at2g06010 : 293.0) encodes a novel protein whose expression level is induced in lines overexpressing salicylic-acid (SA)-inducible Arabidopsis DNA binding with one finger (Dof) transcription factor, called OBF-binding protein 3.; OBP3-responsive gene 4 (ORG4); Has 29 Blast hits to 29 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 586.0) & (original description: Putative ORG4, Description = OBP3-responsive protein 4, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02792_420401-422759' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02793_2389216-2395548' '(at1g51130 : 331.0) Nse4, component of Smc5/6 DNA repair complex; CONTAINS InterPro DOMAIN/s: Nse4 (InterPro:IPR014854); BEST Arabidopsis thaliana protein match is: Nse4, component of Smc5/6 DNA repair complex (TAIR:AT3G20760.1); Has 297 Blast hits to 295 proteins in 132 species: Archae - 0; Bacteria - 0; Metazoa - 72; Fungi - 132; Plants - 74; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|38077 : 189.0) no description available & (gnl|cdd|72167 : 109.0) no description available & (reliability: 662.0) & (original description: Putative NSE4A, Description = Non-structural maintenance of chromosomes element 4 homolog A, PFAM = PF08743)' T '35.2' 'not assigned.unknown' 'niben101scf02793_2575370-2578825' ' no hits & (original description: Putative GMPM1, Description = 18 kDa seed maturation protein, PFAM = PF03760)' T '35.2' 'not assigned.unknown' 'niben101scf02794_409785-712409' ' no hits & (original description: Putative , Description = Retrotransposon protein, putative, unclassified, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02797_108969-112702' '(at2g04280 : 827.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12700.1); Has 130 Blast hits to 130 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 1654.0) & (original description: Putative SUB1, Description = AT4g08810/T32A17_120, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02797_127204-129536' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02798_570500-576847' '(at5g36290 : 308.0) Uncharacterized protein family (UPF0016); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0016 (InterPro:IPR001727); BEST Arabidopsis thaliana protein match is: Uncharacterized protein family (UPF0016) (TAIR:AT1G25520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38092 : 259.0) no description available & (gnl|cdd|32302 : 135.0) no description available & (reliability: 616.0) & (original description: Putative tparl, Description = Transmembrane protein 165, PFAM = PF01169;PF01169)' T '35.2' 'not assigned.unknown' 'niben101scf02801_146005-153104' '(at5g49540 : 135.0) Rab5-interacting family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF786 (InterPro:IPR008504); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69184 : 128.0) no description available & (gnl|cdd|39656 : 112.0) no description available & (reliability: 270.0) & (original description: Putative At5g49540, Description = AT5g49540/K6M13_9, PFAM = PF07019)' T '35.2' 'not assigned.unknown' 'niben101scf02802_1-5330' '(at2g01080 : 204.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT2G27080.2); Has 675 Blast hits to 674 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 673; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 89.2) no description available & (reliability: 408.0) & (original description: Putative At2g01080, Description = Expressed protein, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'niben101scf02803_530846-534486' '(at3g54880 : 105.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25360.2); Has 137 Blast hits to 137 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative , Description = Predicted protein, PFAM = PF13259)' T '35.2' 'not assigned.unknown' 'niben101scf02805_775562-780963' '(at1g68220 : 242.0) Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT1G52910.1); Has 508 Blast hits to 508 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70227 : 108.0) no description available & (reliability: 484.0) & (original description: Putative Sb07g009370, Description = Putative uncharacterized protein Sb07g009370, PFAM = PF06749)' T '35.2' 'not assigned.unknown' 'niben101scf02807_557-3672' ' (original description: Putative hyp1, Description = 36.4 kDa proline-rich protein, PFAM = PF14547)' T '35.2' 'not assigned.unknown' 'niben101scf02807_1016526-1019119' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf02807_1208788-1221262' '(at2g32240 : 432.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05320.3); Has 470429 Blast hits to 168274 proteins in 4282 species: Archae - 6896; Bacteria - 131956; Metazoa - 175525; Fungi - 33166; Plants - 25441; Viruses - 2243; Other Eukaryotes - 95202 (source: NCBI BLink). & (gnl|cdd|35383 : 121.0) no description available & (gnl|cdd|31389 : 87.0) no description available & (reliability: 864.0) & (original description: Putative TCM_002023, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02809_13338-16345' '(at5g21050 : 324.0) LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Hyccin (InterPro:IPR018619); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64090.1); Has 206 Blast hits to 206 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|39886 : 169.0) no description available & (reliability: 648.0) & (original description: Putative MTR_5g087660, Description = Hyccin protein, PFAM = PF09790)' T '35.2' 'not assigned.unknown' 'niben101scf02809_21053-24180' '(gnl|cdd|71235 : 151.0) no description available & (at5g22930 : 88.6) Protein of unknown function (DUF1635); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1635 (InterPro:IPR012862); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1635) (TAIR:AT3G44940.1); Has 97 Blast hits to 97 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative PGSC0003DMG400031075, Description = DUF1635 family protein, PFAM = PF07795)' T '35.2' 'not assigned.unknown' 'niben101scf02809_76365-79442' ' no hits & (original description: Putative BnaA10g25920D, Description = BnaA10g25920D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02814_146369-148755' '(at3g10020 : 86.7) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative At3g10020, Description = AT3g10020/T22K18_16, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02814_175753-178223' ' no hits & (original description: Putative , Description = , PFAM = PF03031)' T '35.2' 'not assigned.unknown' 'niben101scf02816_82991-90780' '(gnl|cdd|37238 : 223.0) no description available & (at2g19710 : 207.0) Regulator of Vps4 activity in the MVB pathway protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061); BEST Arabidopsis thaliana protein match is: Regulator of Vps4 activity in the MVB pathway protein (TAIR:AT4G29440.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67036 : 180.0) no description available & (reliability: 414.0) & (original description: Putative BnaC05g16800D, Description = BnaC05g16800D protein, PFAM = PF03398)' T '35.2' 'not assigned.unknown' 'niben101scf02816_366346-376278' ' no hits & (original description: Putative NNF1, Description = Tobacco nucleolin, PFAM = PF04504)' T '35.2' 'not assigned.unknown' 'niben101scf02816_898386-901887' ' no hits & (original description: Putative PGSC0003DMG400014526, Description = DNA glycosylase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02816_1069375-1072181' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02816_1319608-1324078' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02818_107837-142818' ' no hits & (original description: Putative ACP1, Description = Acyl carrier protein 1, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02819_10329-13162' ' no hits & (original description: Putative glysoja_024954, Description = Epidermal patterning factor-like protein, putative, PFAM = PF17181)' T '35.2' 'not assigned.unknown' 'niben101scf02819_15860-20943' ' no hits & (original description: Putative PGSC0003DMG401000617, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02819_26229-29694' '(at5g20190 : 155.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G80130.1); Has 458 Blast hits to 304 proteins in 39 species: Archae - 0; Bacteria - 85; Metazoa - 7; Fungi - 10; Plants - 317; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative BnaA02g20020D, Description = BnaA02g20020D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02819_423834-427095' '(at1g15320 : 214.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative PGSC0003DMG400000622, Description = BnaC05g11620D protein, PFAM = PF14144)' T '35.2' 'not assigned.unknown' 'niben101scf02819_451650-454257' ' no hits & (original description: Putative PGSC0003DMG400000643, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02820_30268-70475' '(at5g16280 : 1456.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (gnl|cdd|37149 : 454.0) no description available & (reliability: 2912.0) & (original description: Putative At5g16280, Description = Trafficking protein particle complex subunit 8, PFAM = PF12739;PF08626)' T '35.2' 'not assigned.unknown' 'niben101scf02821_330980-342203' '(at1g32310 : 97.8) unknown protein; Has 28 Blast hits to 28 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative F27G20_8, Description = Putative uncharacterized protein At1g32310, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02822_366178-380947' '(at5g36290 : 308.0) Uncharacterized protein family (UPF0016); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0016 (InterPro:IPR001727); BEST Arabidopsis thaliana protein match is: Uncharacterized protein family (UPF0016) (TAIR:AT1G25520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38092 : 259.0) no description available & (gnl|cdd|32302 : 126.0) no description available & (reliability: 616.0) & (original description: Putative tparl, Description = Transmembrane protein 165, PFAM = PF01169;PF01169)' T '35.2' 'not assigned.unknown' 'niben101scf02824_452712-456377' ' (original description: Putative , Description = , PFAM = PF13911)' T '35.2' 'not assigned.unknown' 'niben101scf02825_74215-79313' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF05097)' T '35.2' 'not assigned.unknown' 'niben101scf02825_77731-82871' '(at2g46540 : 86.7) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; Has 42 Blast hits to 42 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative PGSC0003DMG400000233, Description = Fiber protein Fb11, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02825_173934-176963' '(at4g27745 : 169.0) Yippee family putative zinc-binding protein; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: Yippee family putative zinc-binding protein (TAIR:AT5G53940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38609 : 138.0) no description available & (gnl|cdd|66871 : 136.0) no description available & (p59234|yipl_soltu : 117.0) Protein yippee-like - Solanum tuberosum (Potato) & (reliability: 338.0) & (original description: Putative ypel, Description = Protein yippee-like, PFAM = PF03226)' T '35.2' 'not assigned.unknown' 'niben101scf02825_178218-180409' ' (original description: Putative PGSC0003DMG400007007, Description = Putative ATP synthase delta chain, chloroplastic-like, PFAM = PF00213)' T '35.2' 'not assigned.unknown' 'niben101scf02826_89010-91368' ' no hits & (original description: Putative , Description = Retrotransposon Tto1 DNA, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf02827_318942-323052' ' no hits & (original description: Putative LCR74, Description = Kunitz trypsin inhibitor protein, PFAM = PF00304)' T '35.2' 'not assigned.unknown' 'niben101scf02828_320596-322829' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02828_458691-461116' '(at2g01300 : 123.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15010.1); Has 73 Blast hits to 73 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative PGSC0003DMG400030672, Description = BnaA02g27000D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02828_477149-482889' '(at1g71080 : 174.0) RNA polymerase II transcription elongation factor; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Eaf, ELL-associated factor (InterPro:IPR019194); BEST Arabidopsis thaliana protein match is: RNA polymerase II transcription elongation factor (TAIR:AT5G38050.1); Has 12853 Blast hits to 3725 proteins in 482 species: Archae - 50; Bacteria - 7340; Metazoa - 2093; Fungi - 1002; Plants - 180; Viruses - 45; Other Eukaryotes - 2143 (source: NCBI BLink). & (gnl|cdd|39992 : 121.0) no description available & (reliability: 348.0) & (original description: Putative BnaC06g32230D, Description = BnaC06g32230D protein, PFAM = PF09816)' T '35.2' 'not assigned.unknown' 'niben101scf02829_292436-297121' '(at3g63300 : 220.0) Encodes a pleckstrin homology domain- and DUF828-containing protein. Mutants have defects in leaf vascular pattering, with vascular bundles that fail to meet distally in both the cotyledons and leaves. Necessary to the formation of the closed leaf vascular pattern characteristic of dicot leaves in response to auxin. Redundant with FKD2. FKD1 may influence PIN1 localization in an auxin dependent manner. proposed to be a key component of the auxin canalization pathway.; FORKED 1 (FKD1); CONTAINS InterPro DOMAIN/s: Pleckstrin-like, plant (InterPro:IPR013666), Protein of unknown function DUF828 (InterPro:IPR008546); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region (TAIR:AT3G22810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|71887 : 160.0) no description available & (reliability: 440.0) & (original description: Putative FKD1, Description = At5g43870, PFAM = PF08458;PF05703)' T '35.2' 'not assigned.unknown' 'niben101scf02829_292443-300430' '(at3g63300 : 376.0) Encodes a pleckstrin homology domain- and DUF828-containing protein. Mutants have defects in leaf vascular pattering, with vascular bundles that fail to meet distally in both the cotyledons and leaves. Necessary to the formation of the closed leaf vascular pattern characteristic of dicot leaves in response to auxin. Redundant with FKD2. FKD1 may influence PIN1 localization in an auxin dependent manner. proposed to be a key component of the auxin canalization pathway.; FORKED 1 (FKD1); CONTAINS InterPro DOMAIN/s: Pleckstrin-like, plant (InterPro:IPR013666), Protein of unknown function DUF828 (InterPro:IPR008546); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region (TAIR:AT3G22810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|71887 : 170.0) no description available & (reliability: 752.0) & (original description: Putative VAB, Description = VAN3-binding protein, PFAM = PF08458;PF05703)' T '35.2' 'not assigned.unknown' 'niben101scf02829_336064-340756' '(at3g63290 : 392.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: pollen development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G13400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 784.0) & (original description: Putative At3g63290, Description = 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02831_148779-156257' '(at1g79200 : 98.2) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative PGSC0003DMG400030526, Description = Epstein-Barr virus EBNA-1-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02831_244214-257203' '(at1g05950 : 166.0) unknown protein; Has 50 Blast hits to 45 proteins in 14 species: Archae - 5; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02831_289136-291366' ' no hits & (original description: Putative At3g54085, Description = At3g54082, PFAM = PF08571)' T '35.2' 'not assigned.unknown' 'niben101scf02831_316946-319278' ' no hits & (original description: Putative At3g13910, Description = Putative uncharacterized protein At3g13910, PFAM = PF12023)' T '35.2' 'not assigned.unknown' 'niben101scf02831_397924-400373' ' no hits & (original description: Putative , Description = , PFAM = PF17181)' T '35.2' 'not assigned.unknown' 'niben101scf02831_765234-768010' '(at1g17620 : 135.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11890.1); Has 824 Blast hits to 823 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 824; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 112.0) no description available & (reliability: 270.0) & (original description: Putative BnaA08g23020D, Description = BnaA08g23020D protein, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'niben101scf02836_368249-375476' '(at2g07170 : 646.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G27210.1); Has 437 Blast hits to 391 proteins in 95 species: Archae - 6; Bacteria - 71; Metazoa - 26; Fungi - 88; Plants - 186; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (reliability: 1292.0) & (original description: Putative At2g07170, Description = ARM repeat superfamily protein, PFAM = PF12765)' T '35.2' 'not assigned.unknown' 'niben101scf02837_892800-902380' '(at2g44090 : 847.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G59910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1694.0) & (original description: Putative SKIP35, Description = Ankyrin repeat protein SKIP35, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02838_349511-841693' ' (original description: Putative pol, Description = Reverse transcriptase, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf02838_620144-634888' ' no hits & (original description: Putative pdb1, Description = Methyl-CpG-binding domain protein, PFAM = PF01429)' T '35.2' 'not assigned.unknown' 'niben101scf02839_15852-24388' '(at5g24170 : 185.0) Got1/Sft2-like vescicle transport protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Got1/SFT2-like (InterPro:IPR007305), Vesicle transport protein, SFT2-like (InterPro:IPR011691); BEST Arabidopsis thaliana protein match is: Got1/Sft2-like vescicle transport protein family (TAIR:AT5G23550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38098 : 146.0) no description available & (gnl|cdd|71211 : 108.0) no description available & (reliability: 370.0) & (original description: Putative Os01g0219100, Description = Os01g0219100 protein, PFAM = PF04178)' T '35.2' 'not assigned.unknown' 'niben101scf02839_193483-205079' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02840_140953-144741' ' (original description: Putative At5g64130, Description = cAMP-regulated phosphoprotein-like protein, PFAM = PF04667)' T '35.2' 'not assigned.unknown' 'niben101scf02842_95426-98827' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02844_10555-17858' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02847_10179-11873' ' no hits & (original description: Putative orf222, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02849_39316-42436' '(at5g66800 : 87.4) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative , Description = Putative membrane-associated kinase regulator 1-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02849_143704-149951' '(at5g66930 : 287.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1649 (InterPro:IPR012445); Has 247 Blast hits to 247 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 89; Fungi - 83; Plants - 58; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|71294 : 133.0) no description available & (gnl|cdd|39693 : 127.0) no description available & (reliability: 574.0) & (original description: Putative ATG101, Description = Autophagy-related protein 101, PFAM = PF07855)' T '35.2' 'not assigned.unknown' 'niben101scf02849_927848-942647' ' no hits & (original description: Putative PGSC0003DMG400013106, Description = Putative B3 domain-containing protein-like, PFAM = PF02362;PF02362)' T '35.2' 'not assigned.unknown' 'niben101scf02849_988369-990737' ' no hits & (original description: Putative , Description = PH01B031C15.25 protein, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf02849_991910-998267' ' no hits & (original description: Putative PGSC0003DMG400002785, Description = Putative ovule protein, PFAM = PF02362)' T '35.2' 'not assigned.unknown' 'niben101scf02852_83320-86444' '(at4g32290 : 371.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G25330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86287 : 324.0) no description available & (reliability: 742.0) & (original description: Putative BnaC01g06210D, Description = BnaC01g06210D protein, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben101scf02852_177523-183679' '(at4g30130 : 543.0) Protein of unknown function (DUF630 and DUF632); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT2G19090.1); Has 587 Blast hits to 472 proteins in 32 species: Archae - 0; Bacteria - 4; Metazoa - 12; Fungi - 2; Plants - 567; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68357 : 345.0) no description available & (reliability: 1086.0) & (original description: Putative glysoja_013217, Description = DUF630 family protein, PFAM = PF04782;PF04783)' T '35.2' 'not assigned.unknown' 'niben101scf02852_184400-187582' '(at5g15802 : 86.3) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35 Blast hits to 35 proteins in 15 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative MTR_6g015965, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02852_236796-251993' '(at2g05120 : 1349.0) Nucleoporin, Nup133/Nup155-like; CONTAINS InterPro DOMAIN/s: Nucleoporin, Nup133/Nup155-like, N-terminal (InterPro:IPR014908), Nucleoporin, Nup133/Nup155-like, C-terminal (InterPro:IPR007187). & (gnl|cdd|87659 : 113.0) no description available & (reliability: 2698.0) & (original description: Putative NUP133, Description = Nuclear pore complex protein NUP133, PFAM = PF08801)' T '35.2' 'not assigned.unknown' 'niben101scf02852_313607-333654' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02852_360900-366967' '(at3g07760 : 229.0) Sterile alpha motif (SAM) domain-containing protein; CONTAINS InterPro DOMAIN/s: Sterile alpha motif (InterPro:IPR001660), Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 2 (InterPro:IPR011510); Has 60 Blast hits to 60 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 6; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative , Description = , PFAM = PF07647)' T '35.2' 'not assigned.unknown' 'niben101scf02853_186467-188880' ' no hits & (original description: Putative , Description = , PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf02854_341594-347332' ' no hits & (original description: Putative Prg1, Description = Pto-responsive gene 1 protein, PFAM = PF06200;PF09425)' T '35.2' 'not assigned.unknown' 'niben101scf02854_668400-686446' '(at5g16610 : 370.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 740.0) & (original description: Putative Sb01g042570, Description = No apical meristem protein, expressed, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02854_905139-910627' ' no hits & (original description: Putative ALY4, Description = Os03g0278300 protein, PFAM = PF13865)' T '35.2' 'not assigned.unknown' 'niben101scf02854_931225-934540' ' no hits & (original description: Putative HMGA, Description = HMG-Y-related protein A, PFAM = PF02178;PF02178;PF02178;PF00538)' T '35.2' 'not assigned.unknown' 'niben101scf02854_999861-1003311' ' no hits & (original description: Putative At5g18920, Description = Cox19-like CHCH family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02854_1020750-1027902' ' no hits & (original description: Putative PGSC0003DMG400015687, Description = Serine-threonine protein kinase, plant-type, putative, PFAM = PF00560;PF00560)' T '35.2' 'not assigned.unknown' 'niben101scf02860_79917-85113' ' no hits & (original description: Putative RIC5, Description = CRIB domain-containing protein RIC10, PFAM = PF00786)' T '35.2' 'not assigned.unknown' 'niben101scf02862_164768-167290' ' no hits & (original description: Putative TnInt1, Description = Os08g0389500 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02862_190456-193610' '(at2g44200 : 152.0) CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor; CONTAINS InterPro DOMAIN/s: CBF1-interacting co-repressor CIR, N-terminal (InterPro:IPR019339), Pre-mRNA splicing factor (InterPro:IPR022209); BEST Arabidopsis thaliana protein match is: CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor (TAIR:AT2G44195.1); Has 59661 Blast hits to 33745 proteins in 1751 species: Archae - 130; Bacteria - 4372; Metazoa - 27826; Fungi - 6422; Plants - 3866; Viruses - 275; Other Eukaryotes - 16770 (source: NCBI BLink). & (gnl|cdd|39073 : 103.0) no description available & (reliability: 304.0) & (original description: Putative At2g44200, Description = Putative ovule protein, PFAM = PF10197;PF12542)' T '35.2' 'not assigned.unknown' 'niben101scf02864_80607-94995' '(at5g66420 : 901.0) LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP033271 (InterPro:IPR008322), TIM-barrel signal transduction protein, predicted (InterPro:IPR009215); Has 1232 Blast hits to 1230 proteins in 311 species: Archae - 18; Bacteria - 959; Metazoa - 1; Fungi - 84; Plants - 42; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (gnl|cdd|87915 : 434.0) no description available & (reliability: 1802.0) & (original description: Putative NCU00864, Description = TIM-barrel enzyme family protein, PFAM = PF06792;PF09370)' T '35.2' 'not assigned.unknown' 'niben101scf02864_219104-221238' ' no hits & (original description: Putative CPuORF2, Description = Conserved peptide upstream open reading frame 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02864_245411-248138' ' no hits & (original description: Putative XERO1, Description = Dehydrin Xero 1, PFAM = PF00257)' T '35.2' 'not assigned.unknown' 'niben101scf02864_256690-260616' '(at5g49410 : 164.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G73940.1); Has 58 Blast hits to 58 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative BnaC02g39060D, Description = BnaC02g39060D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02864_299992-302908' '(at3g51040 : 256.0) Encodes a protein of 231 amino acids with 51% identity to RTE1 over 209 amino acids.; RTE1-homolog (RTH); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF778 (InterPro:IPR008496); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF778) (TAIR:AT2G26070.1); Has 294 Blast hits to 294 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (gnl|cdd|38360 : 222.0) no description available & (gnl|cdd|69146 : 222.0) no description available & (reliability: 512.0) & (original description: Putative RTH, Description = Protein RTE1-HOMOLOG, PFAM = PF05608;PF05608)' T '35.2' 'not assigned.unknown' 'niben101scf02864_442696-446898' '(at3g51140 : 322.0) Protein of unknown function (DUF3353); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3353 (InterPro:IPR021788); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3353) (TAIR:AT5G23040.1); Has 193 Blast hits to 193 proteins in 61 species: Archae - 0; Bacteria - 77; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 644.0) & (original description: Putative BnaC07g32090D, Description = BnaC07g32090D protein, PFAM = PF11833)' T '35.2' 'not assigned.unknown' 'niben101scf02864_1046009-1048374' ' no hits & (original description: Putative PGSC0003DMG400045733, Description = , PFAM = PF16845)' T '35.2' 'not assigned.unknown' 'niben101scf02864_1130563-1133009' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02864_1155305-1157330' ' no hits & (original description: Putative , Description = Chalcone-flavanone isomerase family protein, putative isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02864_1227128-1239603' '(at1g80910 : 679.0) Protein of unknown function (DUF1712); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1712, fungi (InterPro:IPR013176); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1712) (TAIR:AT1G16020.2); Has 182 Blast hits to 182 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|37833 : 515.0) no description available & (reliability: 1358.0) & (original description: Putative Sb07g020830, Description = Putative uncharacterized protein Sb07g020830, PFAM = PF08217)' T '35.2' 'not assigned.unknown' 'niben101scf02868_357560-360045' '(at2g24762 : 80.9) Encodes a member of the GDU (glutamine dumper) family proteins involved in amino acid export: At4g31730 (GDU1), At4g25760 (GDU2), At5g57685 (GDU3), At2g24762 (GDU4), At5g24920 (GDU5), At3g30725 (GDU6) and At5g38770 (GDU7).; glutamine dumper 4 (GDU4); BEST Arabidopsis thaliana protein match is: glutamine dumper 1 (TAIR:AT4G31730.1); Has 161 Blast hits to 161 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative GDU4, Description = Glutamine dumper 2, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02868_418771-421277' '(at4g25760 : 90.9) Encodes a member of the GDU (glutamine dumper) family proteins involved in amino acid export: At4g31730 (GDU1), At4g25760 (GDU2), At5g57685 (GDU3), At2g24762 (GDU4), At5g24920 (GDU5), At3g30725 (GDU6) and At5g38770 (GDU7).; glutamine dumper 2 (GDU2); BEST Arabidopsis thaliana protein match is: glutamine dumper 3 (TAIR:AT5G57685.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative Os08g0446800, Description = Os08g0446800 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02868_495276-505353' '(at4g31410 : 301.0) Protein of unknown function (DUF1644); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1644) (TAIR:AT3G24740.2); Has 266 Blast hits to 247 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 263; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|71240 : 206.0) no description available & (reliability: 602.0) & (original description: Putative Os02g0150900, Description = Os02g0150900 protein, PFAM = PF07800)' T '35.2' 'not assigned.unknown' 'niben101scf02869_210499-213128' ' (original description: Putative G9-pp3, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf02869_227925-234629' '(at4g28210 : 287.0) embryo defective 1923 (emb1923); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 574.0) & (original description: Putative BnaA01g16990D, Description = BnaA01g16990D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02869_1801343-1808035' '(at2g20390 : 204.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 408.0) & (original description: Putative Os02g0754800, Description = Os02g0754800 protein, PFAM = PF08695)' T '35.2' 'not assigned.unknown' 'niben101scf02873_94445-100847' '(at5g08400 : 361.0) Protein of unknown function (DUF3531); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3531 (InterPro:IPR021920); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3531) (TAIR:AT4G29400.1); Has 314 Blast hits to 314 proteins in 83 species: Archae - 0; Bacteria - 120; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (reliability: 722.0) & (original description: Putative BnaC03g03560D, Description = BnaC03g03560D protein, PFAM = PF12049)' T '35.2' 'not assigned.unknown' 'niben101scf02873_285211-287738' '(at2g42610 : 224.0) LIGHT SENSITIVE HYPOCOTYLS 10 (LSH10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT1G07090.1); Has 309 Blast hits to 309 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68427 : 224.0) no description available & (reliability: 448.0) & (original description: Putative LSH10, Description = Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10, PFAM = PF04852)' T '35.2' 'not assigned.unknown' 'niben101scf02875_9837-12781' ' no hits & (original description: Putative IKU1, Description = AtVQ14, PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf02877_34188-46513' '(at2g30900 : 368.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 43 (TBL43); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 42 (TAIR:AT1G78710.1); Has 1340 Blast hits to 1315 proteins in 29 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 1338; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 161.0) no description available & (reliability: 736.0) & (original description: Putative TBL43, Description = Protein trichome birefringence-like 43, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf02878_133909-143554' '(at1g04650 : 729.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1458.0) & (original description: Putative glysoja_034035, Description = Contains similarity to Chlamydia outer membrane protein, related, PFAM = PF14868)' T '35.2' 'not assigned.unknown' 'niben101scf02878_190698-193530' ' no hits & (original description: Putative PGSC0003DMG400029640, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02881_106436-109009' ' no hits & (original description: Putative PGSC0003DMG400014888, Description = RNase H family protein, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'niben101scf02881_479436-482443' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02886_85254-88517' ' no hits & (original description: Putative mt1k, Description = Metallothionein-like type 1 protein, PFAM = PF01439)' T '35.2' 'not assigned.unknown' 'niben101scf02886_184561-187395' ' no hits & (original description: Putative , Description = , PFAM = PF01429)' T '35.2' 'not assigned.unknown' 'niben101scf02887_100212-104355' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02890_140447-143433' ' no hits & (original description: Putative , Description = Acylamino-acid-releasing enzyme, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02892_177958-181492' ' no hits & (original description: Putative At1g09645, Description = At1g09645, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02895_210098-212439' ' no hits & (original description: Putative , Description = , PFAM = PF12023)' T '35.2' 'not assigned.unknown' 'niben101scf02897_27961-33313' ' no hits & (original description: Putative PGSC0003DMG400002681, Description = , PFAM = PF10536)' T '35.2' 'not assigned.unknown' 'niben101scf02897_366297-371188' '(at3g09980 : 139.0) Family of unknown function (DUF662) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF662 (InterPro:IPR007033); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF662) (TAIR:AT2G36410.2); Has 2513 Blast hits to 2174 proteins in 327 species: Archae - 81; Bacteria - 288; Metazoa - 1019; Fungi - 163; Plants - 196; Viruses - 10; Other Eukaryotes - 756 (source: NCBI BLink). & (gnl|cdd|86752 : 137.0) no description available & (reliability: 278.0) & (original description: Putative BnaC06g14260D, Description = BnaC06g14260D protein, PFAM = PF04949)' T '35.2' 'not assigned.unknown' 'niben101scf02897_545636-552658' '(at5g03670 : 177.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36420.1); Has 700 Blast hits to 624 proteins in 104 species: Archae - 0; Bacteria - 18; Metazoa - 333; Fungi - 60; Plants - 73; Viruses - 24; Other Eukaryotes - 192 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative PGSC0003DMG400028260, Description = , PFAM = PF14309)' T '35.2' 'not assigned.unknown' 'niben101scf02899_28867-34697' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02899_49216-52061' ' no hits & (original description: Putative PGSC0003DMG400016421, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02899_192906-195733' ' no hits & (original description: Putative PGSC0003DMG400016432, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02902_49290-52549' '(at2g31290 : 541.0) Ubiquitin carboxyl-terminal hydrolase family protein; LOCATED IN: mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant (InterPro:IPR021099); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein (TAIR:AT3G63090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1082.0) & (original description: Putative At2g31290, Description = Putative uncharacterized protein At2g31290, PFAM = PF11955)' T '35.2' 'not assigned.unknown' 'niben101scf02908_180840-185085' '(at2g20920 : 274.0) Protein of unknown function (DUF3353); LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3353 (InterPro:IPR021788); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3353) (TAIR:AT5G23040.1); Has 244 Blast hits to 243 proteins in 75 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (reliability: 548.0) & (original description: Putative At2g20920, Description = At2g20920/F5H14.11, PFAM = PF11833)' T '35.2' 'not assigned.unknown' 'niben101scf02908_492087-494584' ' no hits & (original description: Putative , Description = , PFAM = PF14541)' T '35.2' 'not assigned.unknown' 'niben101scf02908_656328-669781' '(at4g38440 : 1093.0) LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II-associated protein 1, C-terminal (InterPro:IPR013929), RNA polymerase II-associated protein 1, N-terminal (InterPro:IPR013930); Has 276 Blast hits to 220 proteins in 102 species: Archae - 0; Bacteria - 2; Metazoa - 151; Fungi - 65; Plants - 41; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|39930 : 518.0) no description available & (reliability: 2186.0) & (original description: Putative , Description = , PFAM = PF08621;PF08620)' T '35.2' 'not assigned.unknown' 'niben101scf02909_176813-207265' '(at3g03570 : 715.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP013022 (InterPro:IPR016607); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3550/UPF0682) (TAIR:AT4G40050.1); Has 215 Blast hits to 210 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 1430.0) & (original description: Putative Sb02g031620, Description = Putative uncharacterized protein Sb02g031620, PFAM = PF12070)' T '35.2' 'not assigned.unknown' 'niben101scf02909_398984-402053' ' no hits & (original description: Putative PGSC0003DMG400001819, Description = Late embryogenesis abundant protein, PFAM = PF03760)' T '35.2' 'not assigned.unknown' 'niben101scf02909_420363-434795' '(at5g58220 : 349.0) Encodes a transthyretin-like S-allantoin synthase protein that catalyzes two steps in the allantoin biosynthesis pathway by acting as a hydroxyisourate hydrolase and a 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) decarboxylase. Two alternatively spliced versions of the transcript give rise to a longer peroxisomally-targeted protein (AT5G58220.1 (called TTL1-)) and a slightly shorter cytoplasmic protein (AT5G58220.3 (called TTL2-)). Both have roughly equivalent enzymatic activity in vitro, but, allantoin biosynthesis is believed to occur in the peroxisome suggesting that the cytosolic form may participate in a different process.; transthyretin-like protein (TTL); FUNCTIONS IN: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity, hydroxyisourate hydrolase activity; INVOLVED IN: regulation of cell growth by extracellular stimulus, brassinosteroid mediated signaling pathway, protein homotetramerization; LOCATED IN: cytosol, extrinsic to internal side of plasma membrane, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional hydroxyisourate hydrolase/2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase (InterPro:IPR017129), Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase (InterPro:IPR018020), Hydroxyisourate hydrolase (InterPro:IPR014306), Transthyretin/hydroxyisourate hydrolase (InterPro:IPR000895); Has 3236 Blast hits to 3236 proteins in 817 species: Archae - 6; Bacteria - 1906; Metazoa - 529; Fungi - 103; Plants - 58; Viruses - 0; Other Eukaryotes - 634 (source: NCBI BLink). & (gnl|cdd|38216 : 126.0) no description available & (gnl|cdd|84877 : 125.0) no description available & (reliability: 698.0) & (original description: Putative TTL, Description = Uric acid degradation bifunctional protein TTL, PFAM = PF09349;PF00576)' T '35.2' 'not assigned.unknown' 'niben101scf02909_667124-670128' '(at1g31130 : 272.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 246 Blast hits to 244 proteins in 29 species: Archae - 2; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 222; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 544.0) & (original description: Putative At4g19950, Description = At4g19950, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02911_458355-461752' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02911_496831-502991' '(at4g12590 : 446.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF106, transmembrane (InterPro:IPR002809), Uncharacterised conserved protein UCP010045, transmembrane eukaryotic (InterPro:IPR008568); Has 409 Blast hits to 409 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 136; Plants - 53; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|38398 : 345.0) no description available & (gnl|cdd|86967 : 330.0) no description available & (reliability: 892.0) & (original description: Putative emc3, Description = ER membrane protein complex subunit 3, PFAM = PF01956)' T '35.2' 'not assigned.unknown' 'niben101scf02913_1-29566' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02914_77165-83118' '(at1g67570 : 387.0) Protein of unknown function (DUF3537); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3537 (InterPro:IPR021924); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3537) (TAIR:AT3G20300.1); Has 140 Blast hits to 140 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 138; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 774.0) & (original description: Putative BnaC06g28600D, Description = BnaC06g28600D protein, PFAM = PF12056)' T '35.2' 'not assigned.unknown' 'niben101scf02914_214073-217050' '(at5g50360 : 149.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02914_276969-292118' '(at3g48500 : 823.0) PIGMENT DEFECTIVE 312 (PDE312); LOCATED IN: plastid chromosome, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027); Has 95 Blast hits to 93 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 14; Plants - 42; Viruses - 14; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 1646.0) & (original description: Putative PTAC10, Description = Protein PLASTID TRANSCRIPTIONALLY ACTIVE 10, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02914_345105-352159' '(at5g50350 : 99.4) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 198.8) & (original description: Putative PGSC0003DMG400015252, Description = Putative cactin-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02915_295565-300231' ' no hits & (original description: Putative MSB1, Description = Cysteine-rich and transmembrane domain-containing protein A, PFAM = PF12734;PF02162;PF02162;PF02162)' T '35.2' 'not assigned.unknown' 'niben101scf02915_872169-874879' '(at5g66440 : 125.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative PGSC0003DMG400003523, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02917_63007-66093' ' no hits & (original description: Putative , Description = , PFAM = PF08268)' T '35.2' 'not assigned.unknown' 'niben101scf02917_87994-90850' ' no hits & (original description: Putative , Description = , PFAM = PF00646)' T '35.2' 'not assigned.unknown' 'niben101scf02919_300997-303287' ' (original description: Putative ndhB, Description = NADH-plastoquinone oxidoreductase subunit 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02922_1-2561' '(at3g12650 : 171.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 31 Blast hits to 31 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative T2E22.4, Description = AT3g12650/T2E22_103, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02922_105492-117615' ' (original description: Putative pco061809, Description = Os06g0235300 protein, PFAM = PF16501)' T '35.2' 'not assigned.unknown' 'niben101scf02922_380279-382795' ' no hits & (original description: Putative PGSC0003DMG400024660, Description = , PFAM = PF12874;PF12874;PF12874)' T '35.2' 'not assigned.unknown' 'niben101scf02927_101103-106084' '(at5g06700 : 607.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). A tbr mutant is impaired in its ability to deposit secondary wall cellulose in specific cell types, most notably in trichomes.; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: plant-type cell wall modification, pectin biosynthetic process, cellulose biosynthetic process, secondary cell wall biogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT3G12060.1); Has 18773 Blast hits to 6666 proteins in 584 species: Archae - 22; Bacteria - 3086; Metazoa - 4181; Fungi - 2776; Plants - 1414; Viruses - 506; Other Eukaryotes - 6788 (source: NCBI BLink). & (gnl|cdd|72785 : 179.0) no description available & (reliability: 1214.0) & (original description: Putative TBR, Description = Protein trichome birefringence, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf02927_826625-934505' ' no hits & (original description: Putative , Description = , PFAM = PF07333)' T '35.2' 'not assigned.unknown' 'niben101scf02927_984977-987578' ' no hits & (original description: Putative , Description = , PFAM = PF07333)' T '35.2' 'not assigned.unknown' 'niben101scf02929_595043-597538' ' no hits & (original description: Putative orf125b, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02936_49224-52504' '(at1g10150 : 363.0) Carbohydrate-binding protein; FUNCTIONS IN: carbohydrate binding; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Carbohydrate-binding protein (TAIR:AT1G59510.1); Has 114 Blast hits to 112 proteins in 22 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 110; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 726.0) & (original description: Putative PP2A10, Description = Protein PHLOEM PROTEIN 2-LIKE A10, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02936_445530-447991' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02937_440393-442725' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02937_1020606-1025679' '(at1g70630 : 588.0) Nucleotide-diphospho-sugar transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: xyloglucanase 113 (TAIR:AT2G35610.1); Has 427 Blast hits to 427 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 379; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 1176.0) & (original description: Putative RAY1, Description = Beta-arabinofuranosyltransferase RAY1, PFAM = PF03407)' T '35.2' 'not assigned.unknown' 'niben101scf02937_1020715-1026532' '(at1g70630 : 587.0) Nucleotide-diphospho-sugar transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: xyloglucanase 113 (TAIR:AT2G35610.1); Has 427 Blast hits to 427 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 379; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 1174.0) & (original description: Putative RAY1, Description = UDP-galactose:fucoside alpha-3-galactosyltransferase, PFAM = PF03407)' T '35.2' 'not assigned.unknown' 'niben101scf02937_1024826-1027422' ' no hits & (original description: Putative , Description = Nucleotide-diphospho-sugar transferase family protein, putative, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf02939_293631-299847' '(at4g13330 : 455.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Has 80 Blast hits to 80 proteins in 32 species: Archae - 0; Bacteria - 21; Metazoa - 13; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 910.0) & (original description: Putative At4g13330, Description = At4g13330, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02940_68196-70612' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02941_13232-16593' '(at1g20180 : 231.0) Protein of unknown function (DUF677); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT3G49070.1); Has 138 Blast hits to 138 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 138; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative At1g20180, Description = UPF0496 protein At1g20180, PFAM = PF05055)' T '35.2' 'not assigned.unknown' 'niben101scf02942_64788-67764' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02942_88497-92388' '(at5g39530 : 199.0) Protein of unknown function (DUF1997); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1997 (InterPro:IPR018971); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1997) (TAIR:AT5G39520.1); Has 204 Blast hits to 204 proteins in 68 species: Archae - 0; Bacteria - 103; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|87911 : 105.0) no description available & (reliability: 398.0) & (original description: Putative , Description = , PFAM = PF09366)' T '35.2' 'not assigned.unknown' 'niben101scf02942_141121-146754' '(at5g39570 : 80.5) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G29075.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative At5g39570, Description = Uncharacterized protein At5g39570, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02945_11600-15999' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02945_141202-146784' '(gnl|cdd|69161 : 338.0) no description available & (at4g16100 : 311.0) Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT5G49220.1); Has 347 Blast hits to 341 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2; Plants - 319; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 622.0) & (original description: Putative BnaC02g38950D, Description = BnaC02g38950D protein, PFAM = PF05623)' T '35.2' 'not assigned.unknown' 'niben101scf02946_40938-45376' '(at3g01435 : 147.0) Expressed protein; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med11 (InterPro:IPR019404); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative MED11, Description = Mediator of RNA polymerase II transcription subunit 11, PFAM = PF10280)' T '35.2' 'not assigned.unknown' 'niben101scf02946_45979-51446' '(at4g22320 : 100.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55210.1). & (reliability: 200.0) & (original description: Putative F383_04771, Description = Protein FAM59A, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02946_83398-119662' ' no hits & (original description: Putative PGSC0003DMG400023652, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02946_157158-160220' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02949_379469-381987' ' no hits & (original description: Putative PGSC0003DMG400010777, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02949_911193-919326' ' no hits & (original description: Putative At1g67785, Description = Putative uncharacterized protein At1g67785, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02952_107941-112687' '(at1g73120 : 80.9) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; EXPRESSED IN: root, cultured cell; Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative T18K17.22, Description = At1g73120, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02953_28906-33262' ' no hits & (original description: Putative PGSC0003DMG400036800, Description = , PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben101scf02971_454091-463873' '(at1g53560 : 92.8) Ribosomal protein L18ae family; BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT1G17080.1); Has 133 Blast hits to 133 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 127; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 185.6) & (original description: Putative RPL18aA, Description = 60S ribosomal protein L18aA, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02971_480549-484998' ' no hits & (original description: Putative , Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02971_549900-554778' ' no hits & (original description: Putative PGSC0003DMG403008565, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02971_610783-615995' '(at2g20820 : 92.0) unknown protein; Has 36 Blast hits to 36 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative PGSC0003DMG400008567, Description = Os03g0581800 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02972_27950-32468' '(at1g64355 : 179.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3593 (InterPro:IPR021995); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative asl4507, Description = Asl4507 protein, PFAM = PF12159)' T '35.2' 'not assigned.unknown' 'niben101scf02972_188541-208173' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02972_210325-218503' '(at5g53440 : 182.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative PGSC0003DMG400012278, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02972_229920-234751' '(at4g10970 : 112.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 72 Blast hits to 50 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative , Description = Transmembrane protein, putative, PFAM = PF07078)' T '35.2' 'not assigned.unknown' 'niben101scf02972_260733-264264' '(at3g61920 : 84.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot, hypocotyl, root, egg cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64700.1); Has 77 Blast hits to 77 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative , Description = , PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf02972_749424-752902' '(at4g27745 : 191.0) Yippee family putative zinc-binding protein; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: Yippee family putative zinc-binding protein (TAIR:AT5G53940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66871 : 151.0) no description available & (gnl|cdd|38609 : 147.0) no description available & (q8s5m8|yipl_orysa : 124.0) Putative yippee-like protein Os10g0369500 - Oryza sativa (Rice) & (reliability: 382.0) & (original description: Putative ypel, Description = Protein yippee-like, PFAM = PF03226)' T '35.2' 'not assigned.unknown' 'niben101scf02972_909851-912318' '(at4g24130 : 216.0) Protein of unknown function, DUF538; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT5G46230.1); Has 362 Blast hits to 362 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86647 : 135.0) no description available & (reliability: 432.0) & (original description: Putative SVB, Description = At1g56580/F25P12_18, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben101scf02973_65683-68183' '(at3g03280 : 99.4) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17350.1); Has 137 Blast hits to 137 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 198.8) & (original description: Putative , Description = , PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf02979_619787-630951' '(at5g16300 : 1206.0) Vps51/Vps67 family (components of vesicular transport) protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps51/Vps67 (InterPro:IPR014812). & (gnl|cdd|37244 : 635.0) no description available & (reliability: 2412.0) & (original description: Putative At5g16300, Description = Low density lipoprotein B-like protein, PFAM = PF08700)' T '35.2' 'not assigned.unknown' 'niben101scf02982_8467-10985' ' no hits & (original description: Putative , Description = Nuclear migration nudC, PFAM = PF04969)' T '35.2' 'not assigned.unknown' 'niben101scf02984_219980-222306' ' no hits & (original description: Putative At2g06320, Description = Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02989_142309-147334' '(at3g18150 : 114.0) RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT3G03360.1); Has 2180 Blast hits to 2140 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 2174; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative , Description = , PFAM = PF00646)' T '35.2' 'not assigned.unknown' 'niben101scf02990_104920-111312' ' no hits & (original description: Putative PGSC0003DMG400030258, Description = Cytochrome c oxidase, subunit VIa, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf02992_316892-319448' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf02994_359089-383998' ' no hits & (original description: Putative syc1174_c, Description = Uncharacterized lipoprotein syc1174_c, PFAM = PF11805)' T '35.2' 'not assigned.unknown' 'niben101scf03000_123768-126418' '(atmg00810 : 155.0) hypothetical protein; DNA/RNA polymerases superfamily protein; CONTAINS InterPro DOMAIN/s: Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (TAIR:AT4G23160.1). & (p10978|polx_tobac : 91.3) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco) & (reliability: 310.0) & (original description: Putative gag, Description = Retrotransposon protein, putative, Ty1-copia subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03000_344218-347405' '(at4g32290 : 369.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G25330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86287 : 319.0) no description available & (reliability: 738.0) & (original description: Putative F10M6.70, Description = At4g32290, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben101scf03004_368639-370731' ' no hits & (original description: Putative petL, Description = Cytochrome b6-f complex subunit 6, PFAM = PF05115)' T '35.2' 'not assigned.unknown' 'niben101scf03006_1037847-1047717' '(at4g14145 : 127.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative At4g14145, Description = At4g14145, PFAM = PF14138)' T '35.2' 'not assigned.unknown' 'niben101scf03009_508983-511888' '(at5g67210 : 417.0) Protein of unknown function (DUF579); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF579 (InterPro:IPR021148), Conserved hypothetical protein CHP01627 (InterPro:IPR006514); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF579) (TAIR:AT3G50220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68247 : 318.0) no description available & (reliability: 834.0) & (original description: Putative GXM2, Description = Putative polysaccharide biosynthesis protein, PFAM = PF04669)' T '35.2' 'not assigned.unknown' 'niben101scf03011_98179-101552' '(at5g49800 : 337.0) Polyketide cyclase/dehydrase and lipid transport superfamily protein; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); Has 197 Blast hits to 196 proteins in 72 species: Archae - 0; Bacteria - 22; Metazoa - 96; Fungi - 2; Plants - 31; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (reliability: 674.0) & (original description: Putative At5g49800, Description = Putative uncharacterized protein At5g49800, PFAM = PF01852)' T '35.2' 'not assigned.unknown' 'niben101scf03012_7161-21760' '(at1g35660 : 1219.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; Has 309 Blast hits to 256 proteins in 99 species: Archae - 0; Bacteria - 11; Metazoa - 192; Fungi - 12; Plants - 36; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 2438.0) & (original description: Putative TCM_036370, Description = Erythroid differentiation-related factor 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03012_98270-101252' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03015_554560-559748' '(at1g67080 : 205.0) Encodes a protein involved in the photoprotection of PSII. An aba4-1 mutant completely lacks neoxanthin,a component of the chromophore of the peripheral antenna system in PSII. ABA4 is required for neoxanthin biosynthesis, an intermediary step in abscisic acid biosynthesis, but no catalytic activity has been detected for the ABA4 protein.; abscisic acid (ABA)-deficient 4 (ABA4); INVOLVED IN: abscisic acid biosynthetic process, regulation of superoxide anion generation, xanthophyll metabolic process, photoprotection; LOCATED IN: PSII associated light-harvesting complex II, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 723 Blast hits to 723 proteins in 64 species: Archae - 0; Bacteria - 78; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 587 (source: NCBI BLink). & (reliability: 410.0) & (original description: Putative ABA4, Description = Neoxanthin synthase, PFAM = PF14108)' T '35.2' 'not assigned.unknown' 'niben101scf03015_765360-775191' '(at1g67060 : 374.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 283 Blast hits to 281 proteins in 136 species: Archae - 0; Bacteria - 145; Metazoa - 0; Fungi - 65; Plants - 41; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 748.0) & (original description: Putative At1g67060, Description = AT1G67060 protein, PFAM = PF13398)' T '35.2' 'not assigned.unknown' 'niben101scf03015_888101-890511' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03016_41391-46693' ' no hits & (original description: Putative PGSC0003DMG400012958, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03018_836724-876659' ' no hits & (original description: Putative PGSC0003DMG400006811, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03021_17318-20110' '(at5g49800 : 213.0) Polyketide cyclase/dehydrase and lipid transport superfamily protein; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); Has 197 Blast hits to 196 proteins in 72 species: Archae - 0; Bacteria - 22; Metazoa - 96; Fungi - 2; Plants - 31; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative At5g49800, Description = At5g49800, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03021_114584-118134' '(at4g01240 : 273.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05390.1); Has 456 Blast hits to 442 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 455; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 546.0) & (original description: Putative Sb06g017790, Description = Putative uncharacterized protein Sb06g017790, PFAM = PF03141)' T '35.2' 'not assigned.unknown' 'niben101scf03021_246878-250060' ' no hits & (original description: Putative Os07g0657600, Description = DNA glycosylase, PFAM = PF00730)' T '35.2' 'not assigned.unknown' 'niben101scf03021_378083-381377' ' no hits & (original description: Putative PGSC0003DMG400010154, Description = DUF4408 domain protein, PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben101scf03023_183616-193174' '(at1g28530 : 538.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; Has 20 Blast hits to 20 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1076.0) & (original description: Putative At1g28530, Description = Putative uncharacterized protein At1g28530, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03023_183967-190520' '(at1g28530 : 314.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; Has 20 Blast hits to 20 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 628.0) & (original description: Putative At1g28530, Description = Elongation factor P-like protein, putative isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03023_193175-201294' '(at5g46020 : 103.0) CONTAINS InterPro DOMAIN/s: Casein kinase substrate, phosphoprotein PP28 (InterPro:IPR019380); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative hasp, Description = HASP protein-like protein, PFAM = PF10252)' T '35.2' 'not assigned.unknown' 'niben101scf03026_896152-928184' '(at4g39690 : 357.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane protein Mitofilin (InterPro:IPR019133); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 714.0) & (original description: Putative At4g39690, Description = AT4g39690/T19P19_80, PFAM = PF09731)' T '35.2' 'not assigned.unknown' 'niben101scf03028_505574-508343' '(at1g21722 : 92.4) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78922.1); Has 47 Blast hits to 47 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 1; Plants - 42; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative At1g21722, Description = F8K7.16, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03029_25420-28354' ' no hits & (original description: Putative PGSC0003DMG400025104, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03029_58759-61412' ' no hits & (original description: Putative At4g03790, Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03029_132591-135043' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03030_1-4967' '(at5g39530 : 279.0) Protein of unknown function (DUF1997); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1997 (InterPro:IPR018971); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1997) (TAIR:AT5G39520.1); Has 204 Blast hits to 204 proteins in 68 species: Archae - 0; Bacteria - 103; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|87911 : 137.0) no description available & (reliability: 558.0) & (original description: Putative , Description = , PFAM = PF09366)' T '35.2' 'not assigned.unknown' 'niben101scf03030_23091-26772' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03030_183146-185706' ' no hits & (original description: Putative , Description = , PFAM = PF05617)' T '35.2' 'not assigned.unknown' 'niben101scf03031_70659-73262' ' no hits & (original description: Putative , Description = , PFAM = PF04520;PF04520)' T '35.2' 'not assigned.unknown' 'niben101scf03035_3991-8690' ' no hits & (original description: Putative BnaC08g36320D, Description = BnaC08g36320D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03035_170343-172868' ' no hits & (original description: Putative PGSC0003DMG400032819, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03036_33186-40828' ' (original description: Putative BnaA07g31240D, Description = Pollen protein Ole E I-like protein, PFAM = PF01190)' T '35.2' 'not assigned.unknown' 'niben101scf03036_33198-40810' ' (original description: Putative BnaA07g31240D, Description = Pollen protein Ole E I-like protein, PFAM = PF01190;PF04554)' T '35.2' 'not assigned.unknown' 'niben101scf03036_762102-769898' ' no hits & (original description: Putative TCM_025255, Description = ROP-interactive CRIB motif-containing protein 4, putative isoform 2, PFAM = PF00786)' T '35.2' 'not assigned.unknown' 'niben101scf03036_789336-793169' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03037_25567-40173' '(at5g25360 : 157.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1). & (reliability: 314.0) & (original description: Putative PGSC0003DMG400019892, Description = DUF4050 family protein, PFAM = PF13259;PF13259)' T '35.2' 'not assigned.unknown' 'niben101scf03037_117395-120217' ' no hits & (original description: Putative TCM_038088, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03037_184261-192846' '(at3g21190 : 394.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G51630.1); Has 760 Blast hits to 758 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 760; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 106.0) no description available & (reliability: 788.0) & (original description: Putative At1g51630, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T '35.2' 'not assigned.unknown' 'niben101scf03038_121954-158100' ' no hits & (original description: Putative pit1, Description = Pit1 protein, PFAM = PF00304)' T '35.2' 'not assigned.unknown' 'niben101scf03038_237337-240528' ' no hits & (original description: Putative MTR_8g012795, Description = Defensin-like protein, PFAM = PF00304)' T '35.2' 'not assigned.unknown' 'niben101scf03038_1399608-1760563' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03038_1579083-1581390' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03039_189412-204286' '(at1g51560 : 523.0) Pyridoxamine 5'-phosphate oxidase family protein; FUNCTIONS IN: FMN binding; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: FMN-binding split barrel (InterPro:IPR012349), Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain (InterPro:IPR011576), FMN-binding split barrel, related (InterPro:IPR009002); BEST Arabidopsis thaliana protein match is: Pyridoxamine 5'-phosphate oxidase family protein (TAIR:AT3G21140.1); Has 633 Blast hits to 633 proteins in 219 species: Archae - 0; Bacteria - 353; Metazoa - 24; Fungi - 0; Plants - 140; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). & (reliability: 1046.0) & (original description: Putative BnaC06g08870D, Description = BnaC06g08870D protein, PFAM = PF13883)' T '35.2' 'not assigned.unknown' 'niben101scf03039_339051-346096' '(at1g73090 : 352.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages. & (reliability: 704.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03039_365298-370515' '(at1g51630 : 518.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G21190.1); Has 751 Blast hits to 749 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 751; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 140.0) no description available & (reliability: 1036.0) & (original description: Putative At3g21190, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T '35.2' 'not assigned.unknown' 'niben101scf03045_79208-81615' ' no hits & (original description: Putative PGSC0003DMG400027920, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03045_381596-385094' ' no hits & (original description: Putative NtoMIS12, Description = Kinetochore protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03045_438673-441566' '(at1g23710 : 140.0) Protein of unknown function (DUF1645); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT1G70420.1); Has 288 Blast hits to 282 proteins in 52 species: Archae - 0; Bacteria - 6; Metazoa - 16; Fungi - 11; Plants - 191; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|71256 : 101.0) no description available & (reliability: 280.0) & (original description: Putative At1g70420, Description = At1g70420/F17O7_4, PFAM = PF07816)' T '35.2' 'not assigned.unknown' 'niben101scf03045_671548-674303' ' no hits & (original description: Putative PGSC0003DMG400025588, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03045_1389696-1392817' ' (original description: Putative bd1, Description = Ethylene-responsive transcription factor LEP, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'niben101scf03046_196790-199960' '(at1g22060 : 111.0) LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G22000.1); Has 84739 Blast hits to 38714 proteins in 2257 species: Archae - 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706; Plants - 4675; Viruses - 308; Other Eukaryotes - 18553 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative Os10g0547000, Description = F-box and Leucine Rich Repeat domains containing protein, putative isoform 1, PFAM = PF10358)' T '35.2' 'not assigned.unknown' 'niben101scf03046_199961-206818' ' (original description: Putative PGSC0003DMG400003903, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03046_535401-538482' ' (original description: Putative LTP1, Description = Non-specific lipid-transfer protein 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03046_688118-690447' ' (original description: Putative LTP2, Description = Non-specific lipid-transfer protein 2, PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'niben101scf03047_86926-89873' ' no hits & (original description: Putative PGSC0003DMG400021709, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03050_193149-198516' '(at1g35180 : 294.0) TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT1G35170.1); Has 191 Blast hits to 191 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 59; Fungi - 8; Plants - 76; Viruses - 3; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|39675 : 123.0) no description available & (gnl|cdd|47992 : 86.5) no description available & (reliability: 588.0) & (original description: Putative SST, Description = Putative uncharacterized protein SST, PFAM = PF03798)' T '35.2' 'not assigned.unknown' 'niben101scf03052_81847-85331' ' no hits & (original description: Putative GRP, Description = Glycine-rich protein, PFAM = PF07172)' T '35.2' 'not assigned.unknown' 'niben101scf03055_63658-69684' '(at3g14850 : 223.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 41 (TBL41); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 38 (TAIR:AT1G29050.1); Has 1339 Blast hits to 1315 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1337; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 159.0) no description available & (reliability: 446.0) & (original description: Putative gal2, Description = Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein, PFAM = PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf03056_204252-206233' ' no hits & (original description: Putative PGSC0003DMG400024545, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03057_71872-74078' '(at3g48660 : 97.8) Protein of unknown function (DUF 3339); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3339 (InterPro:IPR021775); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF 3339) (TAIR:AT5G63500.1); Has 274 Blast hits to 269 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 274; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative BnaA08g06830D, Description = BnaA06g16390D protein, PFAM = PF11820)' T '35.2' 'not assigned.unknown' 'niben101scf03059_2201-4890' ' no hits & (original description: Putative PGSC0003DMG400017259, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03062_246248-248925' '(at4g08330 : 112.0) unknown protein. & (reliability: 224.0) & (original description: Putative At4g08330, Description = Uncharacterized protein At4g08330, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03062_246323-248892' '(at4g08330 : 116.0) unknown protein. & (reliability: 232.0) & (original description: Putative At4g08330, Description = Uncharacterized protein At4g08330, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03064_25508-30775' '(at1g05730 : 185.0) Eukaryotic protein of unknown function (DUF842); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF842, eukaryotic (InterPro:IPR008560); BEST Arabidopsis thaliana protein match is: Eukaryotic protein of unknown function (DUF842) (TAIR:AT2G31725.1); Has 245 Blast hits to 245 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 169; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|86955 : 134.0) no description available & (gnl|cdd|38587 : 127.0) no description available & (reliability: 370.0) & (original description: Putative pco128617, Description = DUF842 domain protein, PFAM = PF05811)' T '35.2' 'not assigned.unknown' 'niben101scf03069_462932-466093' ' no hits & (original description: Putative Tgt1ORF2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03070_583658-585804' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03077_341556-347732' '(at5g23200 : 492.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 984.0) & (original description: Putative PGSC0003DMG400021516, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03080_51946-54404' ' no hits & (original description: Putative PGSC0003DMG400025804, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03080_421699-426440' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03080_440137-446833' '(at2g15860 : 427.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 110 Blast hits to 109 proteins in 51 species: Archae - 0; Bacteria - 4; Metazoa - 37; Fungi - 10; Plants - 37; Viruses - 3; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 854.0) & (original description: Putative TCM_006982, Description = BAT2 domain-containing protein 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03080_484982-501582' '(at2g15890 : 191.0) maternal effect embryo arrest 14 (MEE14); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response to fungus, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 56 Blast hits to 56 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative MEE14, Description = CCG-binding protein 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03085_34137-38196' ' no hits & (original description: Putative BnaA04g18040D, Description = BnaA04g18040D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03085_38720-47132' '(at1g06240 : 461.0) Protein of unknown function DUF455; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF455 (InterPro:IPR007402); BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF455 (TAIR:AT5G04520.1); Has 954 Blast hits to 954 proteins in 412 species: Archae - 0; Bacteria - 697; Metazoa - 13; Fungi - 46; Plants - 75; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|32661 : 210.0) no description available & (reliability: 922.0) & (original description: Putative ABAZ39_05165, Description = Rhamnosyltransferase, PFAM = PF04305)' T '35.2' 'not assigned.unknown' 'niben101scf03088_337090-346045' '(at5g59960 : 320.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 640.0) & (original description: Putative At5g59960, Description = BnaA10g29610D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03091_41749-51719' '(at5g47490 : 892.0) RGPR-related; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: RGPR-related (TAIR:AT5G47480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37124 : 369.0) no description available & (reliability: 1784.0) & (original description: Putative BnaC09g20220D, Description = BnaC09g20220D protein, PFAM = PF12931;PF12932)' T '35.2' 'not assigned.unknown' 'niben101scf03094_542144-544377' ' no hits & (original description: Putative MTR_2g019240, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03096_241736-252225' '(at3g21865 : 317.0) Interacts with PEX4 in a yeast two-hybrid. The PEX4 and PEX22 pair may be important during the remodeling of peroxisome matrix contents as glyoxysomes transition to leaf peroxisomes.; peroxin 22 (PEX22); Has 90 Blast hits to 90 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (reliability: 634.0) & (original description: Putative PEX22, Description = Peroxisome biogenesis protein 22, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03098_5002-7868' '(at5g62280 : 144.0) Protein of unknown function (DUF1442); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1442 (InterPro:IPR009902); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1442) (TAIR:AT2G45360.1); Has 92 Blast hits to 92 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70732 : 101.0) no description available & (reliability: 288.0) & (original description: Putative , Description = , PFAM = PF07279)' T '35.2' 'not assigned.unknown' 'niben101scf03099_98679-102799' '(at1g60060 : 405.0) Serine/threonine-protein kinase WNK (With No Lysine)-related; BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase WNK (With No Lysine)-related (TAIR:AT5G53900.2); Has 3565 Blast hits to 2565 proteins in 80 species: Archae - 0; Bacteria - 3; Metazoa - 15; Fungi - 88; Plants - 227; Viruses - 0; Other Eukaryotes - 3232 (source: NCBI BLink). & (reliability: 810.0) & (original description: Putative Os02g0742700, Description = Os02g0742700 protein, PFAM = PF14215)' T '35.2' 'not assigned.unknown' 'niben101scf03104_460361-464229' '(at4g04780 : 150.0) Encodes the med21 subunit of the mediator complex which is involved in transcriptional regulation. MED21 interacts physically with the E3 ligase HUB1 and this interaction may be important in mediation defense responses to fungal pathogens.; mediator 21 (MED21); CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med21 (InterPro:IPR021384); Has 261 Blast hits to 261 proteins in 70 species: Archae - 0; Bacteria - 2; Metazoa - 108; Fungi - 6; Plants - 134; Viruses - 7; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|36723 : 120.0) no description available & (reliability: 300.0) & (original description: Putative MED21, Description = Mediator of RNA polymerase II transcription subunit 21, PFAM = PF11221)' T '35.2' 'not assigned.unknown' 'niben101scf03111_223083-226334' ' no hits & (original description: Putative PGSC0003DMG400013153, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03113_219924-222207' '(at4g21105 : 84.3) cytochrome-c oxidases;electron carriers; FUNCTIONS IN: electron carrier activity, cytochrome-c oxidase activity; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIIa (InterPro:IPR003177); Has 60 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative PGSC0003DMG400007147, Description = COX VIIa-like protein, PFAM = PF02238)' T '35.2' 'not assigned.unknown' 'niben101scf03113_340897-347772' '(at1g09330 : 269.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF846, eukaryotic (InterPro:IPR008564); Has 518 Blast hits to 518 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 193; Fungi - 145; Plants - 73; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|38405 : 203.0) no description available & (gnl|cdd|69362 : 187.0) no description available & (reliability: 538.0) & (original description: Putative ECH, Description = Golgi apparatus membrane protein-like protein ECHIDNA, PFAM = PF05832)' T '35.2' 'not assigned.unknown' 'niben101scf03113_448931-455560' '(at1g09340 : 654.0) Encodes CHLOROPLAST RNA BINDING (CRB), a putative RNA-binding protein. CRB is important for the proper functioning of the chloroplast. Mutations in CRB also affects the circadian system, altering the expression of both oscillator and output genes.; chloroplast RNA binding (CRB); FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: in 6 processes; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: chloroplast stem-loop binding protein of 41 kDa (TAIR:AT3G63140.1); Has 5936 Blast hits to 5936 proteins in 1402 species: Archae - 366; Bacteria - 3891; Metazoa - 108; Fungi - 58; Plants - 234; Viruses - 3; Other Eukaryotes - 1276 (source: NCBI BLink). & (gnl|cdd|30800 : 111.0) no description available & (reliability: 1308.0) & (original description: Putative CSP41B, Description = Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic, PFAM = PF01370)' T '35.2' 'not assigned.unknown' 'niben101scf03114_18196-21842' '(at4g01150 : 120.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative CURT1A, Description = Protein CURVATURE THYLAKOID 1A, chloroplastic, PFAM = PF14159)' T '35.2' 'not assigned.unknown' 'niben101scf03114_145357-147929' '(at5g52780 : 112.0) Protein of unknown function (DUF3464); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3464 (InterPro:IPR021855); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3464) (TAIR:AT4G19100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative PGSC0003DMG400009497, Description = Putative uncharacterized protein Sb01g030700, PFAM = PF11947)' T '35.2' 'not assigned.unknown' 'niben101scf03114_255462-258529' ' no hits & (original description: Putative MTR_8g098915, Description = Heavy metal transport/detoxification superfamily protein, PFAM = PF00403)' T '35.2' 'not assigned.unknown' 'niben101scf03114_358838-365117' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03114_732756-734908' ' no hits & (original description: Putative , Description = Transport protein SEC31, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03114_735174-742448' '(at4g25660 : 328.0) PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT4G25680.1); Has 753 Blast hits to 753 proteins in 154 species: Archae - 0; Bacteria - 0; Metazoa - 205; Fungi - 55; Plants - 348; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink). & (gnl|cdd|35545 : 161.0) no description available & (gnl|cdd|69428 : 130.0) no description available & (reliability: 656.0) & (original description: Putative , Description = Putative deSI-like protein-like, PFAM = PF05903)' T '35.2' 'not assigned.unknown' 'niben101scf03116_406029-408597' ' no hits & (original description: Putative , Description = , PFAM = PF05032)' T '35.2' 'not assigned.unknown' 'niben101scf03124_129912-136221' '(at2g23530 : 301.0) Zinc-finger domain of monoamine-oxidase A repressor R1; CONTAINS InterPro DOMAIN/s: Cell division cycle-associated protein (InterPro:IPR018866); BEST Arabidopsis thaliana protein match is: Zinc-finger domain of monoamine-oxidase A repressor R1 (TAIR:AT4G37110.1); Has 512 Blast hits to 506 proteins in 112 species: Archae - 0; Bacteria - 4; Metazoa - 144; Fungi - 73; Plants - 256; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 602.0) & (original description: Putative cdca7, Description = Cell division cycle-associated protein 7, PFAM = PF10497)' T '35.2' 'not assigned.unknown' 'niben101scf03129_305789-308670' ' no hits & (original description: Putative PGSC0003DMG400013677, Description = , PFAM = PF00403)' T '35.2' 'not assigned.unknown' 'niben101scf03129_483446-487344' ' no hits & (original description: Putative RFI2, Description = DNA-binding protein, putative, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf03129_602658-605440' '(at3g06868 : 105.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative , Description = , PFAM = PF05340)' T '35.2' 'not assigned.unknown' 'niben101scf03133_15270-19051' '(at4g37420 : 458.0) Domain of unknown function (DUF23); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF23) (TAIR:AT5G40720.1); Has 241 Blast hits to 241 proteins in 76 species: Archae - 0; Bacteria - 129; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|85620 : 105.0) no description available & (reliability: 916.0) & (original description: Putative BnaA01g00530D, Description = BnaA01g00530D protein, PFAM = PF01697)' T '35.2' 'not assigned.unknown' 'niben101scf03141_458744-473639' '(at1g42430 : 509.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55760.3). & (reliability: 1018.0) & (original description: Putative PHYPADRAFT_40110, Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03141_728435-731148' '(gnl|cdd|66742 : 127.0) no description available & (at1g76210 : 89.4) Arabidopsis protein of unknown function (DUF241); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT1G20520.1); Has 440 Blast hits to 428 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 440; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative At1g76210, Description = At1g76210, PFAM = PF03087)' T '35.2' 'not assigned.unknown' 'niben101scf03143_685831-688283' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03143_913965-916425' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03143_919147-925249' '(at1g67850 : 504.0) Protein of unknown function (DUF707); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G13000.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68772 : 499.0) no description available & (reliability: 1008.0) & (original description: Putative gpm621, Description = Lysine ketoglutarate reductase trans-splicing related 1, PFAM = PF05212)' T '35.2' 'not assigned.unknown' 'niben101scf03143_1085527-1090897' '(at1g67850 : 535.0) Protein of unknown function (DUF707); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G13000.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68772 : 508.0) no description available & (reliability: 1070.0) & (original description: Putative gpm621, Description = Lysine ketoglutarate reductase trans-splicing related 1, PFAM = PF05212)' T '35.2' 'not assigned.unknown' 'niben101scf03145_216176-225738' '(at2g21720 : 689.0) Plant protein of unknown function (DUF639); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF639 (InterPro:IPR006927); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF639) (TAIR:AT5G23390.1); Has 146 Blast hits to 143 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 142; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68417 : 593.0) no description available & (reliability: 1378.0) & (original description: Putative BnaC04g33280D, Description = BnaC04g33280D protein, PFAM = PF04842)' T '35.2' 'not assigned.unknown' 'niben101scf03145_239498-241948' ' no hits & (original description: Putative At1g68300, Description = Adenine nucleotide alpha hydrolases-like superfamily protein, PFAM = PF00582)' T '35.2' 'not assigned.unknown' 'niben101scf03145_476139-479074' '(at1g25400 : 94.7) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68440.1). & (reliability: 189.4) & (original description: Putative PGSC0003DMG400005982, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03147_718458-720838' ' no hits & (original description: Putative PGSC0003DMG400019193, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03147_833117-837277' ' no hits & (original description: Putative BnaC03g00510D, Description = BnaC03g00510D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03154_72575-75089' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03154_346055-348165' ' no hits & (original description: Putative petG, Description = Cytochrome b6-f complex subunit 5, PFAM = PF02529)' T '35.2' 'not assigned.unknown' 'niben101scf03156_146333-153124' '(at2g30170 : 329.0) Protein phosphatase 2C family protein; FUNCTIONS IN: phosphoprotein phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Sporulation stage II, protein E C-terminal (InterPro:IPR010822); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66720.1); Has 893 Blast hits to 891 proteins in 246 species: Archae - 2; Bacteria - 86; Metazoa - 181; Fungi - 226; Plants - 226; Viruses - 0; Other Eukaryotes - 172 (source: NCBI BLink). & (gnl|cdd|36593 : 240.0) no description available & (gnl|cdd|30976 : 82.0) no description available & (reliability: 658.0) & (original description: Putative At2g30170, Description = Probable protein phosphatase 2C 26, PFAM = PF07228)' T '35.2' 'not assigned.unknown' 'niben101scf03156_475680-478144' '(at2g30230 : 146.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06980.1); Has 167 Blast hits to 167 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative Sb09g004920, Description = Putative uncharacterized protein Sb09g004920, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf03157_31590-38357' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03157_125140-127460' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03157_137513-142854' ' no hits & (original description: Putative PGSC0003DMG400030335, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03160_27168-31071' ' (original description: Putative PRP1, Description = Repetitive proline-rich cell wall protein 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03160_300348-304182' ' no hits & (original description: Putative PGSC0003DMG400026333, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03164_732036-738130' '(at3g24630 : 114.0) unknown protein; Has 5348 Blast hits to 3182 proteins in 353 species: Archae - 0; Bacteria - 481; Metazoa - 1959; Fungi - 405; Plants - 180; Viruses - 10; Other Eukaryotes - 2313 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative PGSC0003DMG400015636, Description = , PFAM = PF14383;PF14309)' T '35.2' 'not assigned.unknown' 'niben101scf03169_124082-126714' '(at5g46090 : 273.0) Protein of unknown function (DUF679); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF679 (InterPro:IPR007770); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF679) (TAIR:AT4G18425.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68643 : 228.0) no description available & (reliability: 546.0) & (original description: Putative BnaA08g08770D, Description = BnaA08g08770D protein, PFAM = PF05078)' T '35.2' 'not assigned.unknown' 'niben101scf03170_55737-67150' '(at1g15060 : 618.0) Uncharacterised conserved protein UCP031088, alpha/beta hydrolase; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase, At1g15070 (InterPro:IPR016969), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase (TAIR:AT1G73750.1); Has 177 Blast hits to 156 proteins in 44 species: Archae - 2; Bacteria - 72; Metazoa - 2; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 1236.0) & (original description: Putative PGSC0003DMG400026880, Description = Alpha/beta fold hydrolase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03170_100832-106453' '(at3g07150 : 159.0) unknown protein; Has 19 Blast hits to 19 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative F383_24579, Description = Amino acid--[acyl-carrier-protein] ligase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03171_98284-100636' ' no hits & (original description: Putative RCI2B, Description = Hydrophobic protein RCI2B, PFAM = PF01679)' T '35.2' 'not assigned.unknown' 'niben101scf03171_438588-441814' '(at1g09520 : 93.6) LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786); BEST Arabidopsis thaliana protein match is: PHD finger family protein (TAIR:AT3G17460.1); Has 56 Blast hits to 56 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 46; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative RCOM_1003750, Description = DNA binding protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03173_64542-74325' '(at1g69060 : 156.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); Has 3526 Blast hits to 2426 proteins in 300 species: Archae - 4; Bacteria - 245; Metazoa - 1133; Fungi - 271; Plants - 159; Viruses - 2; Other Eukaryotes - 1712 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative At1g69060, Description = BnaA07g27680D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03175_67933-95395' '(at4g26410 : 238.0) Uncharacterised conserved protein UCP022280; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022280 (InterPro:IPR016803); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP022280 (TAIR:AT2G45060.1); Has 79 Blast hits to 79 proteins in 22 species: Archae - 3; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 72; Viruses - 1; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 476.0) & (original description: Putative At4g26410, Description = Putative uncharacterized protein At4g26410, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03175_199728-206442' '(at4g38495 : 168.0) CONTAINS InterPro DOMAIN/s: YL1 nuclear, C-terminal (InterPro:IPR013272); Has 279 Blast hits to 279 proteins in 147 species: Archae - 0; Bacteria - 0; Metazoa - 94; Fungi - 133; Plants - 35; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|34794 : 86.7) no description available & (gnl|cdd|39340 : 86.6) no description available & (reliability: 336.0) & (original description: Putative At4g38495, Description = Putative uncharacterized protein At4g38495, PFAM = PF08265)' T '35.2' 'not assigned.unknown' 'niben101scf03179_103887-107610' '(at4g33925 : 189.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; Has 106 Blast hits to 106 proteins in 53 species: Archae - 8; Bacteria - 0; Metazoa - 47; Fungi - 2; Plants - 36; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative At4g33925, Description = At4g33925, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03184_285428-288630' ' no hits & (original description: Putative ppd4, Description = Purple acid phosphatase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03188_693880-700726' '(at3g01810 : 439.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2). & (reliability: 878.0) & (original description: Putative A20, Description = Nucleolar proteingar2-related, PFAM = PF10358)' T '35.2' 'not assigned.unknown' 'niben101scf03197_309477-312193' ' (original description: Putative TCM_020451, Description = Glutathione S-transferase, PFAM = PF14497)' T '35.2' 'not assigned.unknown' 'niben101scf03197_497411-647255' ' no hits & (original description: Putative , Description = , PFAM = PF00646)' T '35.2' 'not assigned.unknown' 'niben101scf03202_1410940-1413308' ' (original description: Putative ap2, Description = Dehydration-responsive element-binding protein 2C, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'niben101scf03203_843874-847200' '(at3g07470 : 166.0) Protein of unknown function, DUF538; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT3G07460.1); Has 638 Blast hits to 638 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 637; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|86647 : 140.0) no description available & (reliability: 332.0) & (original description: Putative mc304, Description = AT3g07470/F21O3_18, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben101scf03204_116292-119711' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03206_15847-22873' '(at2g37210 : 388.0) Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At5g11950.; lysine decarboxylase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: Putative lysine decarboxylase family protein (TAIR:AT3G53450.1). & (gnl|cdd|86394 : 195.0) no description available & (reliability: 776.0) & (original description: Putative LOG3, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3, PFAM = PF03641)' T '35.2' 'not assigned.unknown' 'niben101scf03206_386098-388634' ' no hits & (original description: Putative , Description = , PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'niben101scf03208_73496-80333' '(at3g45750 : 343.0) Nucleotidyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT3G45760.1). & (gnl|cdd|37488 : 158.0) no description available & (gnl|cdd|34857 : 84.7) no description available & (reliability: 686.0) & (original description: Putative At3g45750, Description = Nucleotidyltransferase family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03208_74166-79080' '(at3g45750 : 182.0) Nucleotidyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT3G45760.1). & (reliability: 364.0) & (original description: Putative At3g45750, Description = Nucleotidyltransferase family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03208_142477-158349' '(at3g24180 : 1410.0) Beta-glucosidase, GBA2 type family protein; FUNCTIONS IN: glucosylceramidase activity, catalytic activity; INVOLVED IN: glucosylceramide catabolic process, sphingolipid metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glucosylceramidase (InterPro:IPR006775), Six-hairpin glycosidase-like (InterPro:IPR008928), Beta-glucosidase, GBA2 type (InterPro:IPR014551); BEST Arabidopsis thaliana protein match is: Beta-glucosidase, GBA2 type family protein (TAIR:AT5G49900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37330 : 1140.0) no description available & (gnl|cdd|68263 : 546.0) no description available & (reliability: 2820.0) & (original description: Putative gba2, Description = Non-lysosomal glucosylceramidase, PFAM = PF12215;PF04685)' T '35.2' 'not assigned.unknown' 'niben101scf03208_536566-539474' ' no hits & (original description: Putative PGSC0003DMG400029635, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03209_120789-126284' '(at4g22320 : 105.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55210.1). & (reliability: 210.0) & (original description: Putative BnaC07g37270D, Description = BnaC07g37270D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03209_126581-132171' '(at4g22310 : 178.0) Uncharacterised protein family (UPF0041); INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0041 (InterPro:IPR005336); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0041) (TAIR:AT4G14695.1); Has 886 Blast hits to 886 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 387; Fungi - 234; Plants - 170; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|36802 : 159.0) no description available & (gnl|cdd|67278 : 117.0) no description available & (reliability: 356.0) & (original description: Putative MPC4, Description = Mitochondrial pyruvate carrier 4, PFAM = PF03650)' T '35.2' 'not assigned.unknown' 'niben101scf03209_161717-164541' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03213_351319-359795' '(at3g48470 : 932.0) EMBRYO DEFECTIVE 2423 (EMB2423); CONTAINS InterPro DOMAIN/s: Telomere length regulation protein (InterPro:IPR019337); Has 246 Blast hits to 237 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 102; Fungi - 75; Plants - 52; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|39547 : 107.0) no description available & (reliability: 1864.0) & (original description: Putative F383_04465, Description = Telomere length regulation TEL2, PFAM = PF10193)' T '35.2' 'not assigned.unknown' 'niben101scf03215_49167-52943' '(at2g32380 : 174.0) Transmembrane protein 97, predicted; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane protein 97, predicted (InterPro:IPR016964); BEST Arabidopsis thaliana protein match is: Transmembrane protein 97, predicted (TAIR:AT1G05210.1); Has 585 Blast hits to 585 proteins in 19 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 558; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative At2g32380, Description = At2g32380, PFAM = PF10914)' T '35.2' 'not assigned.unknown' 'niben101scf03215_312857-316808' '(at1g05205 : 120.0) unknown protein; Has 44 Blast hits to 44 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative F383_07909, Description = Hexokinase-1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03221_54388-59797' ' no hits & (original description: Putative , Description = , PFAM = PF05623)' T '35.2' 'not assigned.unknown' 'niben101scf03221_131685-134851' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03221_136439-139820' ' no hits & (original description: Putative , Description = , PFAM = PF08284)' T '35.2' 'not assigned.unknown' 'niben101scf03221_167325-169954' ' no hits & (original description: Putative , Description = OSJNBb0067G11.4 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03221_280082-283011' ' no hits & (original description: Putative PGSC0003DMG400010154, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03222_124932-127774' '(at1g64870 : 239.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G45200.1); Has 99 Blast hits to 91 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 478.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03222_150512-155931' '(at2g34160 : 147.0) Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein (InterPro:IPR002775), Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related (InterPro:IPR014560); BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein (TAIR:AT1G29250.1); Has 155 Blast hits to 155 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative nab, Description = Alba DNA/RNA-binding protein, PFAM = PF01918)' T '35.2' 'not assigned.unknown' 'niben101scf03222_255786-266274' '(at5g11280 : 263.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative At5g11280, Description = Putative uncharacterized protein At5g11280, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03223_505790-515727' ' no hits & (original description: Putative PGSC0003DMG400018667, Description = Alpha/gamma-adaptin-binding protein p34, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03223_514791-517372' ' (original description: Putative PGSC0003DMG402014864, Description = Putative ovule protein, PFAM = PF05970)' T '35.2' 'not assigned.unknown' 'niben101scf03224_777075-781599' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf03226_182476-189436' '(at5g41560 : 105.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin ligase, Det1/DDB1-complexing (InterPro:IPR018276); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|40013 : 82.9) no description available & (reliability: 210.0) & (original description: Putative At5g41560, Description = At5g41560, PFAM = PF10172)' T '35.2' 'not assigned.unknown' 'niben101scf03226_305234-307947' '(at2g46150 : 109.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G64065.1); Has 262 Blast hits to 261 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 258; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative PGSC0003DMG400005783, Description = Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family, putative isoform 1, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'niben101scf03226_508347-513371' ' no hits & (original description: Putative AGP16, Description = AG-peptide 16, PFAM = PF06376)' T '35.2' 'not assigned.unknown' 'niben101scf03231_87966-95320' ' no hits & (original description: Putative BnaC06g21960D, Description = BnaC06g21960D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03236_283639-284369' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03236_285544-287112' ' no hits & (original description: Putative psaJ, Description = Photosystem I reaction center subunit IX, PFAM = PF01701)' T '35.2' 'not assigned.unknown' 'niben101scf03239_506236-508901' '(at2g46150 : 189.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G64065.1); Has 262 Blast hits to 261 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 258; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative PGSC0003DMG400000069, Description = LEA2-2, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'niben101scf03239_541206-543619' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf03241_12664-16209' '(at4g38060 : 85.9) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative F383_05781, Description = DNA ligase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03241_30270-37756' '(gnl|cdd|70552 : 651.0) no description available & (at5g65490 : 582.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SGT1 (InterPro:IPR010770); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37617 : 514.0) no description available & (reliability: 1164.0) & (original description: Putative At5g65490, Description = Protein ecdysoneless homolog, PFAM = PF07093)' T '35.2' 'not assigned.unknown' 'niben101scf03241_119965-122261' ' no hits & (original description: Putative SKIP34, Description = Protein SKIP34, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03243_99954-102484' ' (original description: Putative PGSC0003DMG400013012, Description = Putative ovule protein, PFAM = PF00319)' T '35.2' 'not assigned.unknown' 'niben101scf03245_797660-801445' ' no hits & (original description: Putative PGSC0003DMG400027498, Description = Alpha crystallin/Hsp20 domain-containing protein, PFAM = PF00011)' T '35.2' 'not assigned.unknown' 'niben101scf03250_10161-12599' ' (original description: Putative Tdv1, Description = Transposon protein, putative, CACTA, En/Spm sub-class, PFAM = PF02992)' T '35.2' 'not assigned.unknown' 'niben101scf03250_14929-17748' ' no hits & (original description: Putative , Description = OSJNBb0068N06.11 protein, PFAM = PF13960)' T '35.2' 'not assigned.unknown' 'niben101scf03253_288423-296352' '(at5g12470 : 417.0) Protein of unknown function (DUF3411); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF399 and DUF3411) (TAIR:AT2G40400.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 834.0) & (original description: Putative RER4, Description = DUF3411 domain protein, PFAM = PF11891)' T '35.2' 'not assigned.unknown' 'niben101scf03254_1107332-1124204' ' no hits & (original description: Putative NOI, Description = RPM1-interacting protein 4 (RIN4) family protein isoform 2, PFAM = PF05627)' T '35.2' 'not assigned.unknown' 'niben101scf03254_1135367-1137855' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03255_39553-43313' ' no hits & (original description: Putative PGSC0003DMG402013304, Description = BnaC08g15400D protein, PFAM = PF05701)' T '35.2' 'not assigned.unknown' 'niben101scf03255_95547-123383' '(at5g47690 : 836.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: cotyledon, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G77600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36738 : 408.0) no description available & (reliability: 1672.0) & (original description: Putative At1g15940, Description = Androgen induced inhibitor of proliferation / pds5 isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03255_110264-113881' '(at5g47690 : 322.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: cotyledon, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G77600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 644.0) & (original description: Putative At5g47690, Description = Sister chromatid cohesion PDS5-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03256_100788-108945' ' no hits & (original description: Putative Ccrd_003807, Description = Homeodomain-like protein, PFAM = PF00249)' T '35.2' 'not assigned.unknown' 'niben101scf03256_118175-125535' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03257_182449-190831' '(at1g71310 : 230.0) cobalt ion binding; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative PGSC0003DMG400001162, Description = Organellar dna-binding protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03262_77578-82902' '(at5g57930 : 494.0) ACCUMULATION OF PHOTOSYSTEM ONE 2; ACCUMULATION OF PHOTOSYSTEM ONE 2 (APO2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF794, plant (InterPro:IPR008512); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF794) (TAIR:AT1G64810.2); Has 139 Blast hits to 117 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69172 : 462.0) no description available & (reliability: 988.0) & (original description: Putative APO2, Description = APO protein 2, chloroplastic, PFAM = PF05634;PF05634)' T '35.2' 'not assigned.unknown' 'niben101scf03262_187506-192672' ' (original description: Putative LgRT9, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf03263_38997-44373' '(at2g20230 : 187.0) Tetraspanin family protein; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: Tetraspanin family protein (TAIR:AT4G28770.2); Has 161 Blast hits to 161 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 160; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative TOM2AH2, Description = Tetraspanin-18, PFAM = PF00335)' T '35.2' 'not assigned.unknown' 'niben101scf03263_73243-79066' '(at4g28760 : 545.0) Protein of unknown function (DUF3741); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3741) (TAIR:AT2G20240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1090.0) & (original description: Putative , Description = , PFAM = PF14383;PF14309;PF12552)' T '35.2' 'not assigned.unknown' 'niben101scf03264_281996-288872' '(at3g63500 : 600.0) Protein of unknown function (DUF1423); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423, plant (InterPro:IPR004082); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1423) (TAIR:AT1G14740.1); Has 3195 Blast hits to 2635 proteins in 392 species: Archae - 10; Bacteria - 381; Metazoa - 1310; Fungi - 308; Plants - 351; Viruses - 11; Other Eukaryotes - 824 (source: NCBI BLink). & (gnl|cdd|70683 : 473.0) no description available & (reliability: 1200.0) & (original description: Putative OBE1, Description = OBERON-like protein, PFAM = PF16312;PF07227)' T '35.2' 'not assigned.unknown' 'niben101scf03266_1-2271' ' (original description: Putative sph1, Description = S-protein homologue, PFAM = PF05938)' T '35.2' 'not assigned.unknown' 'niben101scf03266_144113-146499' ' no hits & (original description: Putative PGSC0003DMG400037400, Description = , PFAM = PF05938)' T '35.2' 'not assigned.unknown' 'niben101scf03266_491178-565310' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03266_599947-602661' ' no hits & (original description: Putative PGSC0003DMG400029640, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03268_608370-610798' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03268_785664-790165' '(at1g72490 : 197.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17400.1); Has 75 Blast hits to 75 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 4; Plants - 58; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative BnaC05g13550D, Description = BnaC05g13550D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03271_247052-249450' ' no hits & (original description: Putative Os02g0584800, Description = Os02g0584800 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03271_268147-273598' '(at1g55915 : 384.0) zinc ion binding; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: WLM (InterPro:IPR013536), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35690.1); Has 560 Blast hits to 511 proteins in 165 species: Archae - 0; Bacteria - 0; Metazoa - 147; Fungi - 231; Plants - 86; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (gnl|cdd|71757 : 202.0) no description available & (reliability: 768.0) & (original description: Putative At1g55915, Description = At1g55915, PFAM = PF00641;PF08325)' T '35.2' 'not assigned.unknown' 'niben101scf03273_260480-266722' '(at2g47010 : 583.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17030.1); Has 72 Blast hits to 72 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 1166.0) & (original description: Putative PGSC0003DMG400012063, Description = At2g47010/F14M4.16, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03277_327318-331078' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03278_184888-191100' '(at1g30130 : 345.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1365 (InterPro:IPR010775); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70562 : 208.0) no description available & (reliability: 690.0) & (original description: Putative BnaA08g17550D, Description = BnaA08g17550D protein, PFAM = PF07103)' T '35.2' 'not assigned.unknown' 'niben101scf03278_720360-726210' '(at1g29040 : 223.0) unknown protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP02058 (InterPro:IPR011719); Has 344 Blast hits to 344 proteins in 122 species: Archae - 2; Bacteria - 227; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (gnl|cdd|88129 : 156.0) no description available & (reliability: 446.0) & (original description: Putative At1g29040, Description = Putative uncharacterized protein At1g29040, PFAM = PF09585)' T '35.2' 'not assigned.unknown' 'niben101scf03278_752930-761643' '(at2g31190 : 671.0) Encodes RUS2 (root UVB sensitive2), a DUF647-containing protein that is homologous to the RUS1 protein. RUS2 works with RUS1 in a root UV-B sensing pathway that plays a vital role in Arabidopsis early seedling morphogenesis and development. Required for auxin polar transport.; ROOT UV-B SENSITIVE 2 (RUS2); INVOLVED IN: response to UV-B, auxin polar transport; LOCATED IN: mitochondrion, plastid, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT5G49820.1). & (gnl|cdd|68458 : 412.0) no description available & (gnl|cdd|39450 : 378.0) no description available & (reliability: 1342.0) & (original description: Putative RUS2, Description = Protein root UVB sensitive 2, chloroplastic, PFAM = PF04884)' T '35.2' 'not assigned.unknown' 'niben101scf03279_308157-320536' '(at5g47940 : 176.0) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03280_28512-30952' ' no hits & (original description: Putative PGSC0003DMG400009426, Description = At3g51500, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03282_61380-96607' '(at4g19490 : 802.0) Putative homolog of yeast Vps54. Thought to associate with POK and ATVPS53 in a plant GARP-like complex involved in the membrane trafficking system.; VPS54; INVOLVED IN: retrograde transport, endosome to Golgi; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515), Vps54-like (InterPro:IPR012501); Has 471 Blast hits to 377 proteins in 168 species: Archae - 2; Bacteria - 4; Metazoa - 149; Fungi - 188; Plants - 45; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (gnl|cdd|37326 : 422.0) no description available & (reliability: 1604.0) & (original description: Putative Os04g0212100, Description = Os04g0212100 protein, PFAM = PF07928)' T '35.2' 'not assigned.unknown' 'niben101scf03282_909777-912238' ' no hits & (original description: Putative PGSC0003DMG400011812, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03283_478218-481672' '(gnl|cdd|66792 : 236.0) no description available & (at3g50150 : 147.0) Plant protein of unknown function (DUF247); INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50170.1); Has 1158 Blast hits to 1035 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1158; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative PGSC0003DMG400008173, Description = DUF247 domain protein, PFAM = PF03140)' T '35.2' 'not assigned.unknown' 'niben101scf03283_590250-596761' '(at3g57280 : 222.0) Transmembrane proteins 14C; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0136, Transmembrane (InterPro:IPR005349); BEST Arabidopsis thaliana protein match is: Transmembrane proteins 14C (TAIR:AT3G20510.1); Has 169 Blast hits to 169 proteins in 36 species: Archae - 0; Bacteria - 2; Metazoa - 27; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|39468 : 81.5) no description available & (reliability: 444.0) & (original description: Putative FAX1, Description = Protein FATTY ACID EXPORT 1, chloroplastic, PFAM = PF03647)' T '35.2' 'not assigned.unknown' 'niben101scf03284_15322-22929' ' no hits & (original description: Putative D1, Description = Flower-specific defensin, PFAM = PF00304)' T '35.2' 'not assigned.unknown' 'niben101scf03284_57043-61010' ' no hits & (original description: Putative , Description = , PFAM = PF00646;PF07734)' T '35.2' 'not assigned.unknown' 'niben101scf03289_76183-78875' ' no hits & (original description: Putative , Description = , PFAM = PF04504)' T '35.2' 'not assigned.unknown' 'niben101scf03289_389943-398911' '(at2g27950 : 217.0) Ring/U-Box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G04460.3); Has 608 Blast hits to 493 proteins in 135 species: Archae - 2; Bacteria - 207; Metazoa - 113; Fungi - 27; Plants - 119; Viruses - 0; Other Eukaryotes - 140 (source: NCBI BLink). & (reliability: 434.0) & (original description: Putative PGSC0003DMG400007157, Description = Protein neuralized, PFAM = PF13920)' T '35.2' 'not assigned.unknown' 'niben101scf03291_247213-258016' '(at4g16180 : 1168.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28720.1); Has 5 Blast hits to 5 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 2336.0) & (original description: Putative dl4130c, Description = Putative uncharacterized protein AT4g16180, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03292_138735-142731' ' no hits & (original description: Putative PGSC0003DMG400008064, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03294_23517-35384' ' no hits & (original description: Putative , Description = , PFAM = PF00646)' T '35.2' 'not assigned.unknown' 'niben101scf03294_229135-253223' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03306_48531-55270' '(at2g19160 : 539.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT4G30060.1); Has 601 Blast hits to 601 proteins in 26 species: Archae - 0; Bacteria - 17; Metazoa - 0; Fungi - 0; Plants - 557; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|86287 : 465.0) no description available & (reliability: 1078.0) & (original description: Putative BnaA09g52890D, Description = BnaA09g52890D protein, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben101scf03307_131745-143381' '(at1g31870 : 304.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2050, pre-mRNA-splicing factor (InterPro:IPR018609); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37865 : 190.0) no description available & (reliability: 608.0) & (original description: Putative BUD13, Description = Pre-mRNA-splicing factor CWC26, PFAM = PF09736)' T '35.2' 'not assigned.unknown' 'niben101scf03307_929492-936525' '(at4g26240 : 220.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative At4g26240, Description = Putative histone-lysine N-methyltransferase EHMT2-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03308_74035-76367' ' no hits & (original description: Putative CYS, Description = Cysteine proteinase inhibitor, PFAM = PF16845)' T '35.2' 'not assigned.unknown' 'niben101scf03308_286320-290302' '(at4g22370 : 102.0) unknown protein; Has 12 Blast hits to 12 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03308_326296-332147' '(at5g20130 : 136.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative BnaA02g04720D, Description = BnaA02g04720D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03313_86819-89133' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03313_117138-121735' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03320_239776-252700' '(at3g11680 : 333.0) Aluminium activated malate transporter family protein; INVOLVED IN: response to aluminum ion; CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G08440.1); Has 773 Blast hits to 771 proteins in 231 species: Archae - 0; Bacteria - 374; Metazoa - 0; Fungi - 30; Plants - 352; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|39909 : 281.0) no description available & (gnl|cdd|85194 : 136.0) no description available & (reliability: 666.0) & (original description: Putative ALMT2, Description = Aluminum activated malate transporter family protein, PFAM = PF11744)' T '35.2' 'not assigned.unknown' 'niben101scf03323_116850-120893' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03325_159760-162736' '(at3g09050 : 224.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 120 Blast hits to 120 proteins in 47 species: Archae - 4; Bacteria - 10; Metazoa - 33; Fungi - 2; Plants - 44; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative Os01g0853000, Description = Os01g0853000 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03326_114286-116899' ' no hits & (original description: Putative , Description = , PFAM = PF12776)' T '35.2' 'not assigned.unknown' 'niben101scf03326_244493-250668' '(at5g16810 : 517.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); Has 87 Blast hits to 87 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 19; Plants - 57; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 1034.0) & (original description: Putative At5g16810, Description = Protein kinase family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03326_386767-389322' ' no hits & (original description: Putative PGSC0003DMG400017542, Description = Putative tetraketide alpha-pyrone reductase 1-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03326_390003-404171' '(at1g65020 : 301.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NERD (InterPro:IPR011528); Has 69 Blast hits to 69 proteins in 27 species: Archae - 0; Bacteria - 18; Metazoa - 8; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 602.0) & (original description: Putative At1g65020, Description = At1g65020, PFAM = PF08378)' T '35.2' 'not assigned.unknown' 'niben101scf03326_598706-601308' '(at3g02910 : 226.0) AIG2-like (avirulence induced gene) family protein; CONTAINS InterPro DOMAIN/s: Butirosin biosynthesis, BtrG-like (InterPro:IPR013024), AIG2-like (InterPro:IPR009288); BEST Arabidopsis thaliana protein match is: AIG2-like (avirulence induced gene) family protein (TAIR:AT5G46720.1); Has 320 Blast hits to 319 proteins in 102 species: Archae - 4; Bacteria - 64; Metazoa - 146; Fungi - 0; Plants - 79; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|39651 : 175.0) no description available & (reliability: 452.0) & (original description: Putative At3g02910, Description = Putative gamma-glutamylcyclotransferase At3g02910, PFAM = PF06094)' T '35.2' 'not assigned.unknown' 'niben101scf03326_613876-632643' '(at5g16660 : 128.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02900.1); Has 106 Blast hits to 106 proteins in 32 species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative BnaC09g41220D, Description = BnaC09g41220D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03330_237685-240260' ' no hits & (original description: Putative PGSC0003DMG400013552, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03340_712470-714766' '(at1g71865 : 91.3) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 33 Blast hits to 33 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03341_114326-117652' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03341_326814-329628' '(at5g58920 : 219.0) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative F383_10253, Description = Homeobox prospero, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03341_509589-512230' ' no hits & (original description: Putative GRP1, Description = Glycine-rich protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03341_586545-591678' '(at5g17210 : 196.0) Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT1G61065.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70227 : 101.0) no description available & (reliability: 392.0) & (original description: Putative Sb10g001220, Description = Putative uncharacterized protein Sb10g001220, PFAM = PF06749)' T '35.2' 'not assigned.unknown' 'niben101scf03345_79921-83256' ' no hits & (original description: Putative TPase, Description = Ac-like transposase, PFAM = PF05699;PF14291)' T '35.2' 'not assigned.unknown' 'niben101scf03346_1919-3631' ' no hits & (original description: Putative rpl32, Description = 50S ribosomal protein L32, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03349_3901-6683' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03350_45504-49197' ' no hits & (original description: Putative At1g09645, Description = At1g09645, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03351_104489-115483' ' no hits & (original description: Putative , Description = , PFAM = PF16669)' T '35.2' 'not assigned.unknown' 'niben101scf03351_406384-408833' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf03351_463043-465674' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03354_46292-50595' '(gnl|cdd|69222 : 558.0) no description available & (at5g23850 : 520.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF821) (TAIR:AT3G48980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37669 : 509.0) no description available & (reliability: 1040.0) & (original description: Putative DTA2, Description = Downstream target of AGL15 2, PFAM = PF05686)' T '35.2' 'not assigned.unknown' 'niben101scf03362_40308-46383' '(at1g60790 : 594.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 2 (TBL2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT5G06700.1); Has 1368 Blast hits to 1349 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 9; Fungi - 0; Plants - 1355; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|72785 : 168.0) no description available & (reliability: 1188.0) & (original description: Putative TBL2, Description = Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf03362_117119-121069' '(at1g21280 : 101.0) CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative PGSC0003DMG400031555, Description = Polypeptide with an integrase domain, PFAM = PF14223;PF14244)' T '35.2' 'not assigned.unknown' 'niben101scf03363_142559-145038' '(at2g23690 : 153.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37240.1); Has 243 Blast hits to 243 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative , Description = , PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf03365_303171-306472' '(at4g17940 : 120.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G20190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative Glyma03g32430.5, Description = TPR transcription factor, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03365_448375-468682' '(at5g44010 : 221.0) unknown protein; Has 28 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 442.0) & (original description: Putative , Description = , PFAM = PF11107)' T '35.2' 'not assigned.unknown' 'niben101scf03365_459679-462802' ' no hits & (original description: Putative , Description = , PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf03365_467913-470197' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03371_141570-156421' '(at5g13950 : 248.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02290.1). & (reliability: 496.0) & (original description: Putative PGSC0003DMG400020237, Description = Nuclear factor kappa-B-binding protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03371_155509-169478' '(at3g19340 : 718.0) LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3754 (InterPro:IPR022227); BEST Arabidopsis thaliana protein match is: aminopeptidases (TAIR:AT5G13940.1); Has 308 Blast hits to 303 proteins in 113 species: Archae - 0; Bacteria - 164; Metazoa - 10; Fungi - 0; Plants - 111; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 1436.0) & (original description: Putative At3g19340, Description = Putative uncharacterized protein At3g19340, PFAM = PF12576)' T '35.2' 'not assigned.unknown' 'niben101scf03371_337000-355718' '(at3g26670 : 554.0) Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF803) (TAIR:AT3G23870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38133 : 242.0) no description available & (gnl|cdd|86910 : 86.5) no description available & (reliability: 1108.0) & (original description: Putative At3g26670, Description = Probable magnesium transporter NIPA8, PFAM = PF05653)' T '35.2' 'not assigned.unknown' 'niben101scf03373_109916-127415' '(at5g10200 : 1090.0) ARM-repeat/Tetratricopeptide repeat (TPR)-like protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM-repeat/Tetratricopeptide repeat (TPR)-like protein (TAIR:AT5G43120.1); Has 2055 Blast hits to 1944 proteins in 240 species: Archae - 0; Bacteria - 3; Metazoa - 1049; Fungi - 393; Plants - 364; Viruses - 4; Other Eukaryotes - 242 (source: NCBI BLink). & (gnl|cdd|39435 : 82.1) no description available & (reliability: 2180.0) & (original description: Putative At5g10200, Description = ARM-repeat/tetratricopeptide repeat-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03374_669815-673018' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03374_673467-703104' ' no hits & (original description: Putative AHL2, Description = Putative DNA-binding protein ESCAROLA, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03374_887050-927323' '(at5g41190 : 612.0) CONTAINS InterPro DOMAIN/s: Nin one binding (NOB1) Zn-ribbon like (InterPro:IPR014881), D-site 20S pre-rRNA nuclease (InterPro:IPR017117); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37674 : 203.0) no description available & (gnl|cdd|72196 : 111.0) no description available & (reliability: 1224.0) & (original description: Putative NOB1, Description = NOB1, PFAM = PF08772;PF17146)' T '35.2' 'not assigned.unknown' 'niben101scf03375_9934-13375' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03375_88021-95823' '(at3g59670 : 290.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37440.2); Has 77 Blast hits to 77 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 580.0) & (original description: Putative PGSC0003DMG400008716, Description = 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase eta-1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03376_202902-205090' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03376_420316-425429' '(at5g65810 : 381.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49720.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 762.0) & (original description: Putative At3g49720, Description = Uncharacterized protein At3g49720, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03377_196849-202770' '(at2g14045 : 113.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown. & (reliability: 226.0) & (original description: Putative Sb02g004830, Description = Putative uncharacterized protein Sb02g004830, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03377_614600-617634' '(at5g22070 : 396.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT3G52060.2); Has 580 Blast hits to 577 proteins in 24 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 0; Plants - 550; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (gnl|cdd|86287 : 345.0) no description available & (reliability: 792.0) & (original description: Putative At5g22070, Description = Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben101scf03385_559789-568407' '(at4g34260 : 1116.0) FUC95A; FUNCTIONS IN: 1,2-alpha-L-fucosidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase-like (InterPro:IPR008928), Uncharacterised conserved protein UCP007663 (InterPro:IPR016518); Has 1349 Blast hits to 1316 proteins in 300 species: Archae - 2; Bacteria - 1123; Metazoa - 0; Fungi - 116; Plants - 52; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 2232.0) & (original description: Putative FUC95A, Description = Alpha-L-fucosidase 2, PFAM = PF14498)' T '35.2' 'not assigned.unknown' 'niben101scf03385_568094-571045' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03385_648190-650708' ' no hits & (original description: Putative zfp1, Description = Zinc finger protein 7, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03389_155676-169780' '(at1g32120 : 349.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557), Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G51538.1); Has 16736 Blast hits to 9656 proteins in 576 species: Archae - 4; Bacteria - 1182; Metazoa - 7098; Fungi - 2631; Plants - 1178; Viruses - 174; Other Eukaryotes - 4469 (source: NCBI BLink). & (reliability: 698.0) & (original description: Putative F8A12.6, Description = Aminotransferase-like, plant mobile domain family protein, PFAM = PF10536)' T '35.2' 'not assigned.unknown' 'niben101scf03389_155691-159484' '(at1g32120 : 348.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557), Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G51538.1); Has 16736 Blast hits to 9656 proteins in 576 species: Archae - 4; Bacteria - 1182; Metazoa - 7098; Fungi - 2631; Plants - 1178; Viruses - 174; Other Eukaryotes - 4469 (source: NCBI BLink). & (reliability: 696.0) & (original description: Putative F8A12.6, Description = Aminotransferase-like, plant mobile domain family protein, PFAM = PF10536)' T '35.2' 'not assigned.unknown' 'niben101scf03390_623268-625744' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03390_1110153-1520012' ' no hits & (original description: Putative , Description = , PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben101scf03392_159390-187661' '(q75ld5|dmi1l_orysa : 1110.0) Probable ion channel DMI1-like, chloroplast precursor - Oryza sativa (Rice) & (at5g49960 : 896.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1012 (InterPro:IPR010420); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1012) (TAIR:AT5G02940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1792.0) & (original description: Putative CASTOR, Description = Ion channel CASTOR, PFAM = PF06241)' T '35.2' 'not assigned.unknown' 'niben101scf03393_196140-198253' ' no hits & (original description: Putative , Description = , PFAM = PF08137)' T '35.2' 'not assigned.unknown' 'niben101scf03397_88041-91570' '(at4g39840 : 326.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 20719 Blast hits to 6096 proteins in 607 species: Archae - 22; Bacteria - 3243; Metazoa - 4364; Fungi - 2270; Plants - 237; Viruses - 128; Other Eukaryotes - 10455 (source: NCBI BLink). & (reliability: 652.0) & (original description: Putative BnaA01g34680D, Description = BnaA01g34680D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03398_132434-135156' '(at5g65340 : 247.0) Protein of unknown function, DUF617; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF617, plant (InterPro:IPR006460); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF617 (TAIR:AT2G22460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68336 : 220.0) no description available & (reliability: 494.0) & (original description: Putative , Description = , PFAM = PF04759)' T '35.2' 'not assigned.unknown' 'niben101scf03398_427955-430545' ' no hits & (original description: Putative PGSC0003DMG401016146, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03398_569731-594565' ' no hits & (original description: Putative At1g04930, Description = BnaA10g03070D protein, PFAM = PF15306)' T '35.2' 'not assigned.unknown' 'niben101scf03400_88239-99702' ' no hits & (original description: Putative glysoja_000610, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03400_107665-114977' '(at5g04460 : 659.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Ring/U-Box superfamily protein (TAIR:AT2G27950.1). & (reliability: 1318.0) & (original description: Putative At5g04460, Description = RING/U-box domain-containing protein, PFAM = PF13920)' T '35.2' 'not assigned.unknown' 'niben101scf03401_182532-185208' ' no hits & (original description: Putative , Description = , PFAM = PF07172)' T '35.2' 'not assigned.unknown' 'niben101scf03403_113619-119322' '(at4g30200 : 349.0) Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.; vernalization5/VIN3-like (VEL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vegetative to reproductive phase transition of meristem; LOCATED IN: PcG protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423, plant (InterPro:IPR004082), Fibronectin, type III-like fold (InterPro:IPR008957), Fibronectin, type III (InterPro:IPR003961); BEST Arabidopsis thaliana protein match is: Fibronectin type III domain-containing protein (TAIR:AT5G57380.1). & (reliability: 698.0) & (original description: Putative BnaC03g12980D, Description = BnaC03g12980D protein, PFAM = PF07227)' T '35.2' 'not assigned.unknown' 'niben101scf03403_269758-272999' '(at2g39120 : 461.0) Ubiquitin carboxyl-terminal hydrolase family protein; LOCATED IN: mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant (InterPro:IPR021099); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein (TAIR:AT3G58520.1); Has 404 Blast hits to 398 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 404; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 922.0) & (original description: Putative At2g39120, Description = Group II intron splicing protein WTF9, PFAM = PF11955)' T '35.2' 'not assigned.unknown' 'niben101scf03404_4776-8316' '(gnl|cdd|68233 : 165.0) no description available & (at5g43180 : 153.0) Protein of unknown function, DUF599; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF599 (InterPro:IPR006747); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF599 (TAIR:AT4G31330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative BnaA06g36820D, Description = BnaA06g36820D protein, PFAM = PF04654)' T '35.2' 'not assigned.unknown' 'niben101scf03407_224510-226713' '(at1g52855 : 93.2) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15534.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03412_596002-599738' '(at5g05480 : 499.0) Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A (InterPro:IPR021102); BEST Arabidopsis thaliana protein match is: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein (TAIR:AT3G14920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 998.0) & (original description: Putative At5g05480, Description = AT5g05480/MOP10_2, PFAM = PF12222)' T '35.2' 'not assigned.unknown' 'niben101scf03413_195250-199797' '(at3g54260 : 447.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 36 (TBL36); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 43 (TAIR:AT2G30900.1); Has 1361 Blast hits to 1313 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 1360; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 160.0) no description available & (reliability: 894.0) & (original description: Putative TBL36, Description = Protein trichome birefringence-like 36, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf03413_335155-341892' ' (original description: Putative Sb05g002100, Description = Putative uncharacterized protein Sb05g002100, PFAM = PF01648)' T '35.2' 'not assigned.unknown' 'niben101scf03419_346616-360237' '(at1g44920 : 231.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3054 (InterPro:IPR021414); Has 246 Blast hits to 246 proteins in 119 species: Archae - 14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative CGLD9, Description = Predicted protein, PFAM = PF11255)' T '35.2' 'not assigned.unknown' 'niben101scf03419_1548550-1569559' ' no hits & (original description: Putative , Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03420_203214-206269' '(at5g26230 : 132.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative MAKR1, Description = Probable membrane-associated kinase regulator 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03422_202205-204900' '(at3g27750 : 161.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: Vacuolar sorting protein 9 (VPS9) domain (TAIR:AT5G09320.1); Has 106 Blast hits to 106 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative At3g27750, Description = Protein EMBRYO DEFECTIVE 3123, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03422_488977-495640' '(at5g41270 : 121.0) CONTAINS InterPro DOMAIN/s: RNAse P, Rpr2/Rpp21 subunit (InterPro:IPR007175); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative F383_29939, Description = Zinc metalloprotease zmpB, PFAM = PF04032)' T '35.2' 'not assigned.unknown' 'niben101scf03425_188722-219158' '(at1g34320 : 788.0) Protein of unknown function (DUF668); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700), Protein of unknown function DUF3475 (InterPro:IPR021864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT5G08660.1); Has 339 Blast hits to 273 proteins in 21 species: Archae - 0; Bacteria - 1; Metazoa - 3; Fungi - 0; Plants - 335; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68572 : 111.0) no description available & (reliability: 1576.0) & (original description: Putative At1g34320, Description = DUF668 family protein, PFAM = PF11961;PF05003)' T '35.2' 'not assigned.unknown' 'niben101scf03426_46165-53294' '(at4g32570 : 94.0) TIFY domain protein 8 (TIFY8); CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative TIFY8, Description = TIFY domain protein 8 isoform 6, PFAM = PF06200)' T '35.2' 'not assigned.unknown' 'niben101scf03427_1037588-1040886' ' no hits & (original description: Putative PGSC0003DMG400022835, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03427_1081398-1088105' '(at1g28520 : 583.0) vascular plant one zinc finger protein (VOZ1); FUNCTIONS IN: transcription activator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: vascular plant one zinc finger protein 2 (TAIR:AT2G42400.1); Has 77 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1166.0) & (original description: Putative VOZ1, Description = Transcription factor VOZ1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03431_20361-22880' ' no hits & (original description: Putative ORF3, Description = Putative uncharacterized protein ORF3, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03434_39132-42619' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03437_64982-69561' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03437_333429-338680' '(at1g16080 : 434.0) unknown protein; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 81 Blast hits to 81 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 868.0) & (original description: Putative CPLD24, Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03438_566912-569730' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03439_97640-102007' ' no hits & (original description: Putative PGSC0003DMG400021271, Description = , PFAM = PF02892)' T '35.2' 'not assigned.unknown' 'niben101scf03444_92439-95044' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03444_173699-179503' '(at5g14370 : 119.0) CCT motif family protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT4G25990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative col1, Description = CONSTANS-like protein, PFAM = PF06203)' T '35.2' 'not assigned.unknown' 'niben101scf03444_292841-300148' '(at5g40640 : 531.0) unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27390.1); Has 104 Blast hits to 102 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 1062.0) & (original description: Putative At3g27390, Description = Uncharacterized membrane protein At3g27390, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03444_454049-456681' '(at5g40690 : 148.0) CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative At5g40690, Description = At5g40690, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03445_1-3330' '(at5g63000 : 271.0) Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); Has 40 Blast hits to 40 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|39808 : 165.0) no description available & (reliability: 542.0) & (original description: Putative BnaA06g22470D, Description = BnaA06g22470D protein, PFAM = PF02466)' T '35.2' 'not assigned.unknown' 'niben101scf03445_56412-66587' '(at3g48200 : 1090.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 210 Blast hits to 148 proteins in 42 species: Archae - 0; Bacteria - 118; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 2180.0) & (original description: Putative At3g48200, Description = Putative uncharacterized protein At3g48200, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03445_56427-59614' '(at3g48200 : 403.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 210 Blast hits to 148 proteins in 42 species: Archae - 0; Bacteria - 118; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 806.0) & (original description: Putative At3g48200, Description = BnaCnng09300D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03445_206281-213257' '(at5g63050 : 325.0) embryo defective 2759 (EMB2759); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages. & (reliability: 650.0) & (original description: Putative EMB2759, Description = Embryo defective 2759 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03445_219309-229915' '(at4g24680 : 271.0) Encodes MOS1 (MODIFIER OF snc1). MOS1 contains a BAT2 domain that is conserved in plants and animals. MOS1 regulates the expression of SNC1, a TIR-NB-LRR-type of R protein.; MODIFIER OF snc1 (MOS1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of gene expression, epigenetic; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; Has 5806 Blast hits to 4291 proteins in 546 species: Archae - 8; Bacteria - 946; Metazoa - 2312; Fungi - 705; Plants - 202; Viruses - 15; Other Eukaryotes - 1618 (source: NCBI BLink). & (reliability: 542.0) & (original description: Putative PGSC0003DMG402018164, Description = , PFAM = PF07001)' T '35.2' 'not assigned.unknown' 'niben101scf03445_657792-664981' '(at5g50410 : 144.0) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03445_684794-689647' '(at3g48210 : 207.0) CONTAINS InterPro DOMAIN/s: Kinetochore-Ndc80 complex, subunit Spc25 (InterPro:IPR013255); Has 194 Blast hits to 194 proteins in 72 species: Archae - 0; Bacteria - 4; Metazoa - 72; Fungi - 39; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|39856 : 117.0) no description available & (reliability: 414.0) & (original description: Putative glysoja_012194, Description = Kinetochore protein spc25, PFAM = PF08234)' T '35.2' 'not assigned.unknown' 'niben101scf03446_1076274-1083330' '(at4g30620 : 197.0) Uncharacterised BCR, YbaB family COG0718; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0133 (InterPro:IPR004401); BEST Arabidopsis thaliana protein match is: Uncharacterised BCR, YbaB family COG0718 (TAIR:AT2G24020.2); Has 1854 Blast hits to 1854 proteins in 759 species: Archae - 0; Bacteria - 1576; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative ybaB, Description = YbaB/EbfC DNA-binding family protein, PFAM = PF02575)' T '35.2' 'not assigned.unknown' 'niben101scf03446_1477003-1479683' '(at4g31830 : 122.0) unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative BnaA01g05030D, Description = BnaA01g05030D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03448_374418-380466' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03449_245115-254366' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Retrovirus-related Pol polyprotein LINE-1, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf03453_135087-138122' '(at3g25400 : 145.0) CONTAINS InterPro DOMAIN/s: NTP Pyrophosphohydrolase MazG-related, RS21-C6 (InterPro:IPR011394), EAR (InterPro:IPR009039), NTP pyrophosphohydrolase MazG, putative catalytic core (InterPro:IPR004518); Has 1123 Blast hits to 1121 proteins in 452 species: Archae - 22; Bacteria - 753; Metazoa - 81; Fungi - 3; Plants - 83; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative CDA03, Description = Nucleotide pyrophosphohydrolase, PFAM = PF12643)' T '35.2' 'not assigned.unknown' 'niben101scf03455_226021-247107' '(at3g59090 : 304.0) LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: tobamovirus multiplication 1 (TAIR:AT4G21790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 608.0) & (original description: Putative Sb03g034730, Description = Putative uncharacterized protein Sb03g034730, PFAM = PF06454;PF06454)' T '35.2' 'not assigned.unknown' 'niben101scf03455_379788-382114' ' no hits & (original description: Putative ACRE180, Description = Avr9/Cf-9 rapidly elicited protein 180, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03455_444697-449913' ' (original description: Putative ycf23, Description = Ycf23 protein, PFAM = PF04481)' T '35.2' 'not assigned.unknown' 'niben101scf03457_121048-125152' '(at3g59680 : 123.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative BnaC08g29920D, Description = BnaC08g29920D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03460_498568-501025' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'niben101scf03461_81825-84910' '(at1g26650 : 360.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69430.1); Has 205 Blast hits to 204 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 720.0) & (original description: Putative At1g26650, Description = T24P13.3, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03461_111777-115639' '(at3g11810 : 105.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G03330.1); Has 141 Blast hits to 141 proteins in 21 species: Archae - 0; Bacteria - 9; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative PGSC0003DMG400002851, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03461_424661-430439' '(at3g29180 : 437.0) Protein of unknown function (DUF1336); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT5G39430.1). & (gnl|cdd|70520 : 277.0) no description available & (reliability: 874.0) & (original description: Putative CW14, Description = AT3G29180 protein, PFAM = PF07059)' T '35.2' 'not assigned.unknown' 'niben101scf03463_271761-280915' '(at5g66180 : 519.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678); Has 8458 Blast hits to 6982 proteins in 2152 species: Archae - 444; Bacteria - 6084; Metazoa - 538; Fungi - 249; Plants - 190; Viruses - 0; Other Eukaryotes - 953 (source: NCBI BLink). & (gnl|cdd|37409 : 122.0) no description available & (gnl|cdd|30493 : 92.8) no description available & (reliability: 1038.0) & (original description: Putative At5g66180, Description = S-adenosyl-L-methionine-dependent methyltransferase domain-containing protein, PFAM = PF01189;PF01189)' T '35.2' 'not assigned.unknown' 'niben101scf03467_36442-40642' ' no hits & (original description: Putative , Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03467_69190-71801' '(at5g47920 : 107.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative , Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben101scf03468_246185-256235' '(at1g71190 : 421.0) Senescence associated gene (SAG). Expression induced by ozone. Encodes a plant-specific protein of unknown function. Based on a personal communication from David Meinke (08/21/2007), this gene is not allelic to TTN4, even though this has been stated previously in a publication.; senescence associated gene 18 (SAG18); LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Alkaline phytoceramidase (aPHC) (TAIR:AT5G11870.2). & (reliability: 842.0) & (original description: Putative SAG18, Description = SAG18, PFAM = PF05875)' T '35.2' 'not assigned.unknown' 'niben101scf03469_492535-498000' '(gnl|cdd|72603 : 122.0) no description available & (at3g22680 : 106.0) Encodes RNA-DIRECTED DNA METHYLATION 1 (RDM1), forming a complex with DMS3 (AT3G49250) and DRD1 (AT2G16390). This complex is termed DDR. The DDR complex is required for polymerase V transcripts and RNA-directed DNA methylation.; RNA-DIRECTED DNA METHYLATION 1 (RDM1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1950 (InterPro:IPR015270); Has 26 Blast hits to 26 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative RDM1, Description = RNA-directed DNA methylation protein, PFAM = PF09187)' T '35.2' 'not assigned.unknown' 'niben101scf03476_114749-123376' '(at5g35460 : 541.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2838 (InterPro:IPR021261); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38106 : 368.0) no description available & (reliability: 1082.0) & (original description: Putative BnaC04g29620D, Description = BnaC04g29620D protein, PFAM = PF10998)' T '35.2' 'not assigned.unknown' 'niben101scf03478_96445-98870' ' no hits & (original description: Putative PGSC0003DMG400030541, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03478_122819-125283' ' no hits & (original description: Putative PGSC0003DMG400030540, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03478_133225-146224' '(at1g70950 : 99.8) TPX2 (targeting protein for Xklp2) protein family; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23060.1); Has 1245 Blast hits to 1139 proteins in 232 species: Archae - 0; Bacteria - 257; Metazoa - 305; Fungi - 75; Plants - 372; Viruses - 3; Other Eukaryotes - 233 (source: NCBI BLink). & (reliability: 199.6) & (original description: Putative WDL3, Description = TPX2 (Targeting protein for Xklp2) family protein, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'niben101scf03479_241410-244594' '(at3g25130 : 124.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; Has 3885 Blast hits to 2658 proteins in 280 species: Archae - 12; Bacteria - 208; Metazoa - 970; Fungi - 222; Plants - 148; Viruses - 11; Other Eukaryotes - 2314 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative PGSC0003DMG400017495, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03479_429844-432326' ' no hits & (original description: Putative NCS, Description = Norcoclaurine synthase, PFAM = PF00407)' T '35.2' 'not assigned.unknown' 'niben101scf03479_666124-672227' '(at5g48660 : 167.0) B-cell receptor-associated protein 31-like ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: B-cell receptor-associated protein 31-like (TAIR:AT3G07190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37173 : 118.0) no description available & (reliability: 334.0) & (original description: Putative BnaA06g30040D, Description = BnaA06g30040D protein, PFAM = PF05529)' T '35.2' 'not assigned.unknown' 'niben101scf03481_88715-96978' '(at1g80190 : 205.0) Similar to the PSF1 component of GINS complex, which in other organism was shown to be involved in the initiation of DNA replication.; partner of SLD five 1 (PSF1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: DNA-dependent DNA replication initiation; LOCATED IN: GINS complex, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GINS complex, subunit Psf1 (InterPro:IPR005339); Has 334 Blast hits to 334 proteins in 169 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 142; Plants - 43; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|38513 : 170.0) no description available & (gnl|cdd|67279 : 110.0) no description available & (reliability: 410.0) & (original description: Putative pco124429, Description = DNA replication complex GINS protein PSF1, PFAM = PF05916)' T '35.2' 'not assigned.unknown' 'niben101scf03481_242897-265467' ' no hits & (original description: Putative , Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03484_49054-55152' '(at3g11680 : 409.0) Aluminium activated malate transporter family protein; INVOLVED IN: response to aluminum ion; CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G08440.1); Has 773 Blast hits to 771 proteins in 231 species: Archae - 0; Bacteria - 374; Metazoa - 0; Fungi - 30; Plants - 352; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|39909 : 311.0) no description available & (gnl|cdd|85194 : 149.0) no description available & (reliability: 818.0) & (original description: Putative ALMT8, Description = Aluminum-activated malate transporter 8, PFAM = PF11744)' T '35.2' 'not assigned.unknown' 'niben101scf03484_509604-514257' '(at3g11680 : 119.0) Aluminium activated malate transporter family protein; INVOLVED IN: response to aluminum ion; CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G08440.1); Has 773 Blast hits to 771 proteins in 231 species: Archae - 0; Bacteria - 374; Metazoa - 0; Fungi - 30; Plants - 352; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|39909 : 90.1) no description available & (reliability: 238.0) & (original description: Putative PGSC0003DMG400035191, Description = Aluminum-activated malate transporter 8, PFAM = PF11744)' T '35.2' 'not assigned.unknown' 'niben101scf03486_29321-31859' ' no hits & (original description: Putative , Description = Zinc knuckle domain containing protein-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03486_83222-86107' '(at5g62280 : 136.0) Protein of unknown function (DUF1442); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1442 (InterPro:IPR009902); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1442) (TAIR:AT2G45360.1); Has 92 Blast hits to 92 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70732 : 102.0) no description available & (reliability: 272.0) & (original description: Putative , Description = , PFAM = PF07279)' T '35.2' 'not assigned.unknown' 'niben101scf03488_646519-650402' ' no hits & (original description: Putative POPTR_0002s24680g, Description = RPM1-interacting protein 4, PFAM = PF05627)' T '35.2' 'not assigned.unknown' 'niben101scf03488_778284-781486' ' (original description: Putative PGSC0003DMG400019390, Description = Reverse transcriptase family member, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf03488_839575-847040' '(at4g13630 : 141.0) Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT1G04890.1). & (gnl|cdd|68159 : 121.0) no description available & (reliability: 282.0) & (original description: Putative MYOB2, Description = Zein-binding domain-containing protein, PFAM = PF04576)' T '35.2' 'not assigned.unknown' 'niben101scf03488_839922-843209' '(at4g13630 : 80.5) Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT1G04890.1). & (reliability: 161.0) & (original description: Putative At1g04890, Description = Zein-binding protein, PFAM = PF04576)' T '35.2' 'not assigned.unknown' 'niben101scf03488_896495-906236' '(at1g04900 : 666.0) Protein of unknown function (DUF185); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF185 (InterPro:IPR003788); Has 316 Blast hits to 314 proteins in 164 species: Archae - 0; Bacteria - 117; Metazoa - 2; Fungi - 113; Plants - 44; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|86057 : 136.0) no description available & (reliability: 1332.0) & (original description: Putative At1g04900, Description = Putative uncharacterized protein At1g04900, PFAM = PF02636)' T '35.2' 'not assigned.unknown' 'niben101scf03488_1295664-1324286' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03489_53437-60580' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03489_160832-162392' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03491_185773-191476' '(at3g09250 : 266.0) Nuclear transport factor 2 (NTF2) family protein; FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: nucleotide-excision repair; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UvrB/UvrC protein (InterPro:IPR001943); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT4G10925.3). & (reliability: 532.0) & (original description: Putative , Description = , PFAM = PF13474)' T '35.2' 'not assigned.unknown' 'niben101scf03492_4869-13792' '(at5g57230 : 258.0) Thioredoxin superfamily protein; CONTAINS InterPro DOMAIN/s: Thioredoxin-like fold (InterPro:IPR012336); Has 37 Blast hits to 37 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 516.0) & (original description: Putative , Description = Subtilisin-like protease, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03493_60651-66390' ' no hits & (original description: Putative BnaC07g40070D, Description = BnaC07g40070D protein, PFAM = PF14990)' T '35.2' 'not assigned.unknown' 'niben101scf03497_736411-786294' '(at3g28430 : 1005.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function FPL (InterPro:IPR019155); Has 243 Blast hits to 233 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (gnl|cdd|37430 : 493.0) no description available & (reliability: 2010.0) & (original description: Putative TFB1M, Description = Uncharacterized protein isoform 3, PFAM = PF09758)' T '35.2' 'not assigned.unknown' 'niben101scf03500_254712-257203' ' no hits & (original description: Putative Sb02g000270, Description = Putative uncharacterized protein Sb02g000270, PFAM = PF10604)' T '35.2' 'not assigned.unknown' 'niben101scf03500_255103-257520' ' no hits & (original description: Putative Sb02g000270, Description = Putative uncharacterized protein Sb02g000270, PFAM = PF10604)' T '35.2' 'not assigned.unknown' 'niben101scf03502_1589-5383' ' no hits & (original description: Putative BnaA01g00860D, Description = BnaA01g00860D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03502_5427-12537' '(at2g23470 : 464.0) ROOT UV-B SENSITIVE 4 (RUS4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT5G49820.1); Has 409 Blast hits to 406 proteins in 122 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 58; Plants - 179; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|39450 : 236.0) no description available & (gnl|cdd|68458 : 205.0) no description available & (reliability: 928.0) & (original description: Putative RUS4, Description = Protein root UVB sensitive 4, PFAM = PF04884)' T '35.2' 'not assigned.unknown' 'niben101scf03503_153330-156076' '(at1g76070 : 85.9) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20310.1); Has 66 Blast hits to 66 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03503_247286-256495' '(at2g16980 : 379.0) Major facilitator superfamily protein; FUNCTIONS IN: tetracycline transporter activity; INVOLVED IN: response to antibiotic, tetracycline transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Tetracycline resistance protein, TetA (InterPro:IPR001958), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G16970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38027 : 206.0) no description available & (reliability: 758.0) & (original description: Putative MEE15, Description = Tetracycline transporter-like protein 1, PFAM = PF07690)' T '35.2' 'not assigned.unknown' 'niben101scf03506_269911-272318' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03507_337254-339883' '(at1g11700 : 124.0) Protein of unknown function, DUF584; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT1G61930.1); Has 334 Blast hits to 333 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 328; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68105 : 97.1) no description available & (reliability: 248.0) & (original description: Putative F25C20.15, Description = At1g11700, PFAM = PF04520)' T '35.2' 'not assigned.unknown' 'niben101scf03510_410411-416597' '(at5g65120 : 99.4) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 198.8) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03512_259723-262048' ' no hits & (original description: Putative , Description = Zinc finger containing preotein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03517_18433-21176' ' no hits & (original description: Putative , Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben101scf03520_157527-163707' '(at1g36320 : 491.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37920.1); Has 93 Blast hits to 90 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 982.0) & (original description: Putative F7F23.4, Description = At1g36320/F7F23_4, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03520_159815-163201' '(at1g36320 : 226.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37920.1); Has 93 Blast hits to 90 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative At1g36320, Description = Plant/F7F23-4 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03520_197377-201661' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03526_52764-55742' ' (original description: Putative pr10, Description = Pathogenesis-related protein PR10, PFAM = PF00407)' T '35.2' 'not assigned.unknown' 'niben101scf03526_125597-128016' ' no hits & (original description: Putative PGSC0003DMG400002846, Description = , PFAM = PF17123)' T '35.2' 'not assigned.unknown' 'niben101scf03526_168323-175776' '(at1g04530 : 131.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G17940.1); Has 713 Blast hits to 362 proteins in 65 species: Archae - 10; Bacteria - 98; Metazoa - 37; Fungi - 8; Plants - 512; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative At1g80130, Description = Tetratricopeptide repeat-like superfamily protein, putative isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03528_15776-28546' ' no hits & (original description: Putative , Description = , PFAM = PF13963)' T '35.2' 'not assigned.unknown' 'niben101scf03528_114030-229277' ' no hits & (original description: Putative iqd2, Description = Protein IQ-DOMAIN 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03528_423514-436039' '(at2g02410 : 256.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF901 (InterPro:IPR010298). & (gnl|cdd|69511 : 105.0) no description available & (reliability: 512.0) & (original description: Putative LOC100217107, Description = Expressed protein (With alternative splicing), PFAM = PF05991)' T '35.2' 'not assigned.unknown' 'niben101scf03531_77148-79489' ' no hits & (original description: Putative PGSC0003DMG400029479, Description = Periaxin-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03534_303203-305830' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03536_44855-94921' '(at3g50380 : 1947.0) INVOLVED IN: protein localization; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein (InterPro:IPR009543); Has 365 Blast hits to 355 proteins in 118 species: Archae - 0; Bacteria - 0; Metazoa - 156; Fungi - 111; Plants - 61; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|37020 : 154.0) no description available & (gnl|cdd|87123 : 94.2) no description available & (reliability: 3894.0) & (original description: Putative Os12g0594200, Description = Os12g0594200 protein, PFAM = PF16909;PF06650)' T '35.2' 'not assigned.unknown' 'niben101scf03539_19077-30809' '(at3g22270 : 687.0) Topoisomerase II-associated protein PAT1; BEST Arabidopsis thaliana protein match is: Topoisomerase II-associated protein PAT1 (TAIR:AT4G14990.1); Has 263 Blast hits to 260 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 98; Fungi - 15; Plants - 121; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (reliability: 1374.0) & (original description: Putative At4g14990, Description = Putative uncharacterized protein At4g14990, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03545_72384-86881' '(at5g61910 : 124.0) DCD (Development and Cell Death) domain protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 membrane targeting protein (InterPro:IPR018029), Kelch related (InterPro:IPR013089), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Calcium-dependent phospholipid-binding Copine family protein (TAIR:AT5G61900.3). & (reliability: 248.0) & (original description: Putative , Description = DCD domain protein, putative isoform 1, PFAM = PF10539)' T '35.2' 'not assigned.unknown' 'niben101scf03546_121989-131206' ' no hits & (original description: Putative Os08g0526400, Description = Os08g0526400 protein, PFAM = PF05627)' T '35.2' 'not assigned.unknown' 'niben101scf03548_19243-35607' '(at5g20165 : 109.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1242 (InterPro:IPR009653). & (gnl|cdd|87170 : 84.5) no description available & (reliability: 218.0) & (original description: Putative ksh, Description = Protein kish, PFAM = PF06842)' T '35.2' 'not assigned.unknown' 'niben101scf03548_318239-321375' '(at1g41920 : 137.0) General transcription factor 2-related zinc finger protein; BEST Arabidopsis thaliana protein match is: TTF-type zinc finger protein with HAT dimerisation domain (TAIR:AT1G19260.1); Has 703 Blast hits to 659 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 344; Fungi - 0; Plants - 359; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative At1g41920, Description = H1005F08.16 protein, PFAM = PF14291)' T '35.2' 'not assigned.unknown' 'niben101scf03550_51889-55736' '(at3g18180 : 399.0) Glycosyltransferase family 61 protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Glycosyltransferase AER61, uncharacterised (InterPro:IPR007657); BEST Arabidopsis thaliana protein match is: Glycosyltransferase family 61 protein (TAIR:AT3G18170.1); Has 763 Blast hits to 763 proteins in 164 species: Archae - 0; Bacteria - 23; Metazoa - 306; Fungi - 8; Plants - 399; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|39896 : 304.0) no description available & (gnl|cdd|68160 : 255.0) no description available & (reliability: 798.0) & (original description: Putative hga7, Description = Glycosyltransferase, HGA-like, putative,expressed, PFAM = PF04577)' T '35.2' 'not assigned.unknown' 'niben101scf03551_5162-11684' '(at2g03800 : 450.0) encodes a D-aminoacyl-tRNA deacylase. Involved in detoxification of D-aminoacyl-tRNA. Mutants also show ethanol-hypersensitive phenotype.; GEKO1 (GEK1); CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP016210 (InterPro:IPR018033), D-aminoacyl-tRNA deacylase (InterPro:IPR007508); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86658 : 231.0) no description available & (reliability: 900.0) & (original description: Putative GEK1, Description = D-aminoacyl-tRNA deacylase, PFAM = PF04414)' T '35.2' 'not assigned.unknown' 'niben101scf03552_13586-16670' '(gnl|cdd|71235 : 141.0) no description available & (at5g22930 : 82.0) Protein of unknown function (DUF1635); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1635 (InterPro:IPR012862); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1635) (TAIR:AT3G44940.1); Has 97 Blast hits to 97 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative PGSC0003DMG400031075, Description = DUF1635 family protein, PFAM = PF07795)' T '35.2' 'not assigned.unknown' 'niben101scf03555_253222-258140' '(at3g07640 : 213.0) unknown protein; Has 27 Blast hits to 27 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03555_266190-287581' '(at2g04235 : 168.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 713 Blast hits to 345 proteins in 122 species: Archae - 2; Bacteria - 262; Metazoa - 138; Fungi - 55; Plants - 39; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative BnaCnng00500D, Description = BnaCnng00500D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03563_129669-140783' ' no hits & (original description: Putative , Description = , PFAM = PF16589)' T '35.2' 'not assigned.unknown' 'niben101scf03565_205452-208511' ' (original description: Putative At2g05640, Description = PIF1-like helicase, PFAM = PF05970)' T '35.2' 'not assigned.unknown' 'niben101scf03570_192401-314620' ' (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf03572_276127-500194' ' no hits & (original description: Putative , Description = Protein transport Sec31A, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03572_467204-472954' '(at5g43210 : 145.0) Excinuclease ABC, C subunit, N-terminal; FUNCTIONS IN: nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Excinuclease ABC, C subunit, N-terminal (InterPro:IPR000305); BEST Arabidopsis thaliana protein match is: Excinuclease ABC, C subunit, N-terminal (TAIR:AT2G30350.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative glysoja_006168, Description = Putative structure-specific endonuclease subunit SLX1-like, PFAM = PF01541)' T '35.2' 'not assigned.unknown' 'niben101scf03580_63600-66946' '(at2g36430 : 505.0) Plant protein of unknown function (DUF247); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G22550.2); Has 1137 Blast hits to 1027 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66792 : 445.0) no description available & (reliability: 1010.0) & (original description: Putative BnaA05g07830D, Description = BnaA05g07830D protein, PFAM = PF03140)' T '35.2' 'not assigned.unknown' 'niben101scf03584_1-2459' ' no hits & (original description: Putative , Description = Zinc finger containing preotein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03584_42104-46364' '(at4g31330 : 340.0) Protein of unknown function, DUF599; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF599 (InterPro:IPR006747); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF599 (TAIR:AT5G10580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68233 : 247.0) no description available & (reliability: 680.0) & (original description: Putative BnaA01g05930D, Description = BnaA01g05930D protein, PFAM = PF04654)' T '35.2' 'not assigned.unknown' 'niben101scf03592_169716-174551' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03595_182974-189984' '(at4g22310 : 169.0) Uncharacterised protein family (UPF0041); INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0041 (InterPro:IPR005336); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0041) (TAIR:AT4G14695.1); Has 886 Blast hits to 886 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 387; Fungi - 234; Plants - 170; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|36802 : 155.0) no description available & (gnl|cdd|67278 : 108.0) no description available & (reliability: 338.0) & (original description: Putative MPC3, Description = Mitochondrial pyruvate carrier 3, PFAM = PF03650)' T '35.2' 'not assigned.unknown' 'niben101scf03595_553521-557666' '(at5g08240 : 82.4) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23160.1); Has 69 Blast hits to 69 proteins in 10 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative PGSC0003DMG400032563, Description = At5g08240, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03595_1070075-1078432' '(at3g19920 : 333.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64230.1); Has 217 Blast hits to 217 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 666.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03597_129936-137116' '(at3g21610 : 227.0) Acid phosphatase/vanadium-dependent haloperoxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: Acid phosphatase/vanadium-dependent haloperoxidase-related protein (TAIR:AT1G67600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|32146 : 142.0) no description available & (reliability: 454.0) & (original description: Putative tll0019, Description = Tll0019 protein, PFAM = PF02681)' T '35.2' 'not assigned.unknown' 'niben101scf03599_100994-103992' '(at3g60590 : 276.0) unknown protein; LOCATED IN: chloroplast inner membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 552.0) & (original description: Putative BnaA04g01240D, Description = BnaA04g01240D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03600_66673-73661' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03600_169094-175884' '(at3g01810 : 461.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2). & (reliability: 922.0) & (original description: Putative A20, Description = Nucleolar proteingar2-related, PFAM = PF10358)' T '35.2' 'not assigned.unknown' 'niben101scf03600_323705-326574' '(at3g48510 : 144.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G63350.1); Has 98 Blast hits to 98 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03605_191322-201506' '(at1g30755 : 473.0) Protein of unknown function (DUF668); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700), Protein of unknown function DUF3475 (InterPro:IPR021864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT1G34320.1); Has 465 Blast hits to 399 proteins in 71 species: Archae - 2; Bacteria - 14; Metazoa - 66; Fungi - 16; Plants - 336; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|68572 : 113.0) no description available & (reliability: 946.0) & (original description: Putative F383_22002, Description = Elongation factor G, PFAM = PF11961;PF05003)' T '35.2' 'not assigned.unknown' 'niben101scf03607_36326-39063' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03611_1-1182' ' no hits & (original description: Putative BH1, Description = Putative transposase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03614_106523-114502' '(at1g08030 : 521.0) Encodes a tyrosylprotein sulfotransferase (TPST). This protein is a 500-aa type I transmembrane protein that shows no sequence similarity to animal TPSTs. Activity confirmed by protein expression in yeast. TPST is expressed throughout the plant body, and the highest levels of expression are in the root apical meristem. A loss-of-function mutant TPST displayed a marked dwarf phenotype accompanied by stunted roots, pale green leaves, reduction in higher order veins, early senescence, and a reduced number of flowers and siliques.; tyrosylprotein sulfotransferase (TPST); FUNCTIONS IN: protein-tyrosine sulfotransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: Golgi apparatus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sulfotransferase (InterPro:IPR005331), Heparan sulphate 6-sulfotransferase (InterPro:IPR010635); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1042.0) & (original description: Putative TPST, Description = Protein-tyrosine sulfotransferase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03619_456121-458597' ' no hits & (original description: Putative BnaA03g26210D, Description = PARP, PFAM = PF02037;PF02037)' T '35.2' 'not assigned.unknown' 'niben101scf03619_510277-512862' ' (original description: Putative TFHS1, Description = Late embryogenesis abundant protein, LEA-5, PFAM = PF03242)' T '35.2' 'not assigned.unknown' 'niben101scf03619_555926-559964' ' (original description: Putative ppo, Description = Polyphenol oxidase, PFAM = PF12143;PF00264;PF12142)' T '35.2' 'not assigned.unknown' 'niben101scf03628_123595-130110' '(at4g09620 : 198.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); Has 234 Blast hits to 198 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative At4g09620, Description = Mitochondrial transcription termination factor family protein, PFAM = PF02536)' T '35.2' 'not assigned.unknown' 'niben101scf03628_792412-803462' '(at2g31130 : 89.0) unknown protein; Has 116 Blast hits to 113 proteins in 44 species: Archae - 0; Bacteria - 3; Metazoa - 21; Fungi - 2; Plants - 40; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative PGSC0003DMG400020429, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03628_828850-836891' '(at3g58600 : 292.0) Adaptin ear-binding coat-associated protein 1 NECAP-1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: endocytosis; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adaptin ear-binding coat-associated protein 1 NECAP-1 (InterPro:IPR012466); BEST Arabidopsis thaliana protein match is: non-intrinsic ABC protein 4 (TAIR:AT1G03900.1); Has 463 Blast hits to 463 proteins in 142 species: Archae - 0; Bacteria - 2; Metazoa - 232; Fungi - 69; Plants - 94; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|37711 : 257.0) no description available & (gnl|cdd|87402 : 221.0) no description available & (reliability: 584.0) & (original description: Putative BnaA04g01920D, Description = BnaA04g01920D protein, PFAM = PF07933)' T '35.2' 'not assigned.unknown' 'niben101scf03634_309645-311899' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03634_320239-322550' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03634_681452-684710' ' no hits & (original description: Putative PGSC0003DMG400007210, Description = , PFAM = PF00011)' T '35.2' 'not assigned.unknown' 'niben101scf03634_725806-729185' ' no hits & (original description: Putative PGSC0003DMG400007210, Description = , PFAM = PF00011)' T '35.2' 'not assigned.unknown' 'niben101scf03643_933463-943471' '(at5g27730 : 568.0) Protein of unknown function (DUF1624); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1624 (InterPro:IPR012429); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1624) (TAIR:AT5G47900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39881 : 495.0) no description available & (gnl|cdd|34021 : 141.0) no description available & (reliability: 1136.0) & (original description: Putative Sb03g044830, Description = Putative uncharacterized protein Sb03g044830, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03644_237523-240583' ' no hits & (original description: Putative PGSC0003DMG400018845, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03652_15432-21232' '(at3g23090 : 152.0) TPX2 (targeting protein for Xklp2) protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf apex, inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: WVD2-like 1 (TAIR:AT3G04630.3). & (reliability: 304.0) & (original description: Putative F4I4, Description = TPX2, C-terminal domain-containing protein, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'niben101scf03659_102663-105292' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03659_912700-915896' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03662_228180-245001' '(at4g17760 : 229.0) damaged DNA binding;exodeoxyribonuclease IIIs; FUNCTIONS IN: damaged DNA binding, exodeoxyribonuclease III activity; INVOLVED IN: DNA repair; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Repair protein Rad1/Rec1 (InterPro:IPR003021); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative LOC100283074, Description = Cell cycle checkpoint protein RAD1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03670_206549-209696' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03671_245603-249475' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03673_239044-249102' '(at5g66005 : 261.0) Expressed protein; FUNCTIONS IN: nucleoside-triphosphatase activity, transferase activity, nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF265 (InterPro:IPR004948), ATPase, AAA+ type, core (InterPro:IPR003593); Has 418 Blast hits to 418 proteins in 173 species: Archae - 141; Bacteria - 87; Metazoa - 103; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|31805 : 134.0) no description available & (reliability: 522.0) & (original description: Putative U334, Description = Probable UPF0334 kinase-like protein C1orf57, PFAM = PF03266)' T '35.2' 'not assigned.unknown' 'niben101scf03673_604942-607979' ' (original description: Putative , Description = , PFAM = PF03108)' T '35.2' 'not assigned.unknown' 'niben101scf03679_243644-252624' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03685_1-1911' ' no hits & (original description: Putative , Description = , PFAM = PF13962)' T '35.2' 'not assigned.unknown' 'niben101scf03686_173131-178639' '(at1g14770 : 87.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G68030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative PGSC0003DMG400011962, Description = Homeodomain-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03687_70340-72874' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03689_165160-192591' '(at2g17550 : 328.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 215 Blast hits to 205 proteins in 55 species: Archae - 5; Bacteria - 0; Metazoa - 50; Fungi - 10; Plants - 99; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative BnaC01g44220D, Description = BnaC01g44220D protein, PFAM = PF14383;PF14309)' T '35.2' 'not assigned.unknown' 'niben101scf03693_309125-316551' ' no hits & (original description: Putative Sb01g012390, Description = Putative uncharacterized protein Sb01g012390, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03693_345714-350588' '(at2g25737 : 419.0) Sulfite exporter TauE/SafE family protein; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF81 (InterPro:IPR002781); BEST Arabidopsis thaliana protein match is: Sulfite exporter TauE/SafE family protein (TAIR:AT2G36630.1); Has 3417 Blast hits to 2961 proteins in 724 species: Archae - 129; Bacteria - 1927; Metazoa - 0; Fungi - 0; Plants - 198; Viruses - 0; Other Eukaryotes - 1163 (source: NCBI BLink). & (reliability: 838.0) & (original description: Putative BnaC03g72820D, Description = BnaC03g72820D protein, PFAM = PF01925;PF01925)' T '35.2' 'not assigned.unknown' 'niben101scf03693_524869-528799' '(at5g66740 : 588.0) Protein of unknown function (DUF620); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF620 (InterPro:IPR006873); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF620) (TAIR:AT1G75160.1); Has 213 Blast hits to 212 proteins in 19 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 211; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68363 : 412.0) no description available & (reliability: 1176.0) & (original description: Putative F1I16_130, Description = Putative uncharacterized protein F1I16_130, PFAM = PF04788)' T '35.2' 'not assigned.unknown' 'niben101scf03694_269533-273224' ' no hits & (original description: Putative HR7, Description = HR7 protein, PFAM = PF02977)' T '35.2' 'not assigned.unknown' 'niben101scf03695_29869-35680' '(at3g14850 : 431.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 41 (TBL41); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 38 (TAIR:AT1G29050.1); Has 1339 Blast hits to 1315 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1337; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 183.0) no description available & (reliability: 862.0) & (original description: Putative TBL41, Description = Protein trichome birefringence-like 41, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf03702_445630-454309' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03705_159887-162309' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03706_46235-49616' ' (original description: Putative lea5, Description = Late embryogenis abundant protein 5, PFAM = PF03242)' T '35.2' 'not assigned.unknown' 'niben101scf03706_393410-396013' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03708_117096-172741' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Putative reverse transcriptase family member, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03710_141579-144805' ' no hits & (original description: Putative PGSC0003DMG400024151, Description = Transmembrane protein, putative, PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben101scf03710_868610-876580' ' no hits & (original description: Putative PGSC0003DMG400024908, Description = Putative DNA-directed RNA polymerase III subunit RPC7-like, PFAM = PF11705)' T '35.2' 'not assigned.unknown' 'niben101scf03714_27177-33400' '(gnl|cdd|71337 : 190.0) no description available & (at5g48385 : 145.0) FRIGIDA-like protein; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT4G14900.1); Has 1269 Blast hits to 1187 proteins in 101 species: Archae - 0; Bacteria - 22; Metazoa - 72; Fungi - 9; Plants - 1133; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative , Description = Putative myosin-10-like, PFAM = PF07899;PF07899;PF07899)' T '35.2' 'not assigned.unknown' 'niben101scf03714_214255-217469' '(at2g27770 : 311.0) Plant protein of unknown function (DUF868); LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT3G04860.1); Has 288 Blast hits to 288 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 288; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69434 : 249.0) no description available & (reliability: 622.0) & (original description: Putative , Description = , PFAM = PF05910)' T '35.2' 'not assigned.unknown' 'niben101scf03714_271784-274700' ' no hits & (original description: Putative PGSC0003DMG400026538, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03714_274701-277306' '(at5g22580 : 137.0) Stress responsive A/B Barrel Domain; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Stress responsive alpha-beta barrel (InterPro:IPR013097), Dimeric alpha-beta barrel (InterPro:IPR011008); BEST Arabidopsis thaliana protein match is: heat stable protein 1 (TAIR:AT3G17210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative At5g22580, Description = Stress-response A/B barrel domain-containing protein At5g22580, PFAM = PF07876)' T '35.2' 'not assigned.unknown' 'niben101scf03714_442439-450336' '(at3g22430 : 133.0) CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380); BEST Arabidopsis thaliana protein match is: XS domain-containing protein / XS zinc finger domain-containing protein-related (TAIR:AT5G23570.1); Has 565 Blast hits to 510 proteins in 121 species: Archae - 2; Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51; Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative PGSC0003DMG400026527, Description = Suppressor of gene silencing 3, putative, PFAM = PF03468)' T '35.2' 'not assigned.unknown' 'niben101scf03714_569241-571524' '(at4g21105 : 99.4) cytochrome-c oxidases;electron carriers; FUNCTIONS IN: electron carrier activity, cytochrome-c oxidase activity; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIIa (InterPro:IPR003177); Has 60 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 198.8) & (original description: Putative At4g21105, Description = At4g21108/At4g21108, PFAM = PF02238)' T '35.2' 'not assigned.unknown' 'niben101scf03716_426071-429146' '(gnl|cdd|68624 : 118.0) no description available & (at5g01130 : 104.0) Protein of unknown function (DUF674); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF674 (InterPro:IPR007750); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF674) (TAIR:AT5G01150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative TCM_042950, Description = Translation initiation factor IF-2, putative, PFAM = PF05056)' T '35.2' 'not assigned.unknown' 'niben101scf03728_104361-106713' '(at5g11630 : 87.8) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.2); Has 82 Blast hits to 82 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative BnaC09g44970D, Description = BnaC09g44970D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03731_1522-5239' '(at4g21570 : 374.0) Protein of unknown function (DUF300); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT1G11200.1); Has 836 Blast hits to 835 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 284; Fungi - 192; Plants - 240; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink). & (gnl|cdd|67249 : 253.0) no description available & (gnl|cdd|37852 : 248.0) no description available & (reliability: 748.0) & (original description: Putative umc2329, Description = MAPK activating protein, PFAM = PF03619)' T '35.2' 'not assigned.unknown' 'niben101scf03732_279310-282413' ' no hits & (original description: Putative PGSC0003DMG400016153, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03734_243301-532538' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf03735_96066-100387' ' no hits & (original description: Putative PGSC0003DMG400003639, Description = WEB family plant protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03735_236376-734743' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03735_327042-335050' '(at2g17990 : 303.0) BEST Arabidopsis thaliana protein match is: kinectin-related (TAIR:AT5G66250.3); Has 7578 Blast hits to 6129 proteins in 783 species: Archae - 220; Bacteria - 1045; Metazoa - 3605; Fungi - 575; Plants - 442; Viruses - 38; Other Eukaryotes - 1653 (source: NCBI BLink). & (reliability: 606.0) & (original description: Putative CAP2, Description = Putative calcium-dependent protein kinase CPK1 adapter protein 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03736_31317-36734' '(at4g30850 : 372.0) heptahelical transmembrane protein homologous to human adiponectin receptors and progestin receptors; heptahelical transmembrane protein2 (HHP2); FUNCTIONS IN: receptor activity; INVOLVED IN: response to hormone stimulus, response to sucrose stimulus; LOCATED IN: integral to membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Hly-III related (InterPro:IPR004254); BEST Arabidopsis thaliana protein match is: heptahelical protein 3 (TAIR:AT2G24150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35967 : 237.0) no description available & (gnl|cdd|86213 : 136.0) no description available & (reliability: 744.0) & (original description: Putative HHP2, Description = Heptahelical transmembrane protein 2, PFAM = PF03006)' T '35.2' 'not assigned.unknown' 'niben101scf03737_266030-269547' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03738_88386-91987' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03738_97590-103267' '(at3g09250 : 271.0) Nuclear transport factor 2 (NTF2) family protein; FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: nucleotide-excision repair; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UvrB/UvrC protein (InterPro:IPR001943); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT4G10925.3). & (reliability: 542.0) & (original description: Putative , Description = , PFAM = PF13474;PF02151)' T '35.2' 'not assigned.unknown' 'niben101scf03739_252694-260387' '(at5g05240 : 236.0) Uncharacterised conserved protein (UCP030365); CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP030365 (InterPro:IPR016953); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein (UCP030365) (TAIR:AT2G40630.1); Has 61 Blast hits to 59 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative TCM_045516, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03747_95842-99491' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03753_29316-54470' '(at1g33410 : 1272.0) SUPPRESSOR OF AUXIN RESISTANCE1 (SAR1); INVOLVED IN: mRNA export from nucleus, response to auxin stimulus, developmental process; LOCATED IN: nuclear membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoporin Nup120/160 (InterPro:IPR021717). & (gnl|cdd|39721 : 640.0) no description available & (reliability: 2544.0) & (original description: Putative NUP160, Description = Nuclear pore complex protein NUP160, PFAM = PF17238;PF11715)' T '35.2' 'not assigned.unknown' 'niben101scf03755_111174-113740' '(at1g52140 : 130.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03757_59929-62408' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03757_224026-228344' '(at2g35880 : 122.0) TPX2 (targeting protein for Xklp2) protein family; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT4G32330.3); Has 16554 Blast hits to 10282 proteins in 807 species: Archae - 18; Bacteria - 1410; Metazoa - 6904; Fungi - 1967; Plants - 895; Viruses - 63; Other Eukaryotes - 5297 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative Sb05g022180, Description = Putative uncharacterized protein Sb05g022180, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'niben101scf03757_492256-497978' '(at5g06440 : 362.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT3G11720.3). & (reliability: 724.0) & (original description: Putative TCM_023090, Description = Mitotic checkpoint serine/threonine-protein kinase BUB1, putative isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03758_238936-241748' '(at5g66440 : 99.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative PGSC0003DMG400003697, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03759_182112-184562' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03759_182427-190684' '(at5g53620 : 395.0) unknown protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 28929 Blast hits to 19542 proteins in 1425 species: Archae - 211; Bacteria - 3079; Metazoa - 14558; Fungi - 2157; Plants - 966; Viruses - 80; Other Eukaryotes - 7878 (source: NCBI BLink). & (reliability: 790.0) & (original description: Putative BnaC03g14850D, Description = BnaC03g14850D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03766_4369-6599' '(at5g22210 : 84.3) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative , Description = Aspartyl/glutamyl-tRNA (Asn/Gln) amidotransferase subunit B, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03766_379476-382324' '(at3g48510 : 146.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G63350.1); Has 98 Blast hits to 98 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03766_718009-722803' '(at3g27350 : 84.7) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40700.1). & (reliability: 169.4) & (original description: Putative pco073973a, Description = BnaA02g28870D protein, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'niben101scf03766_725260-729770' '(at3g27340 : 176.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 945 Blast hits to 945 proteins in 390 species: Archae - 0; Bacteria - 710; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink). & (gnl|cdd|33338 : 115.0) no description available & (reliability: 352.0) & (original description: Putative ZOSMA_623G00060, Description = Phosphoribosylformimino-5-aminoimidazole carboxamide ribotideisomerase, PFAM = PF06155)' T '35.2' 'not assigned.unknown' 'niben101scf03766_773263-783365' '(at3g01690 : 474.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G14390.1); Has 3903 Blast hits to 3890 proteins in 823 species: Archae - 8; Bacteria - 1296; Metazoa - 705; Fungi - 204; Plants - 316; Viruses - 6; Other Eukaryotes - 1368 (source: NCBI BLink). & (gnl|cdd|36765 : 350.0) no description available & (reliability: 948.0) & (original description: Putative hyd, Description = Abhydrolase domain-containing protein FAM108C1, PFAM = PF12146)' T '35.2' 'not assigned.unknown' 'niben101scf03768_20134-22484' ' no hits & (original description: Putative LSU2, Description = At5g24660, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03768_145490-156447' '(at5g24630 : 159.0) This gene is predicted to encode a protein that forms part of the topoisomerase VI complex. BIN4 is a nuclear-localized protein that can bind DNA. bin4 mutants are brassinolide-insensitive dwarves with severely reduced cell size in leaves, roots, and hypocotyls. Proper development of root hairs and trichomes is also disrupted in bin4 mutants and they have elevated levels of double strand breaks in their cotyledon cells.; brassinosteroid-insensitive4 (BIN4); FUNCTIONS IN: double-stranded DNA binding; INVOLVED IN: in 7 processes; LOCATED IN: DNA topoisomerase complex (ATP-hydrolyzing), nucleus; EXPRESSED IN: cotyledon vascular system, cotyledon, root tip, leaf trichome, leaf; Has 3628 Blast hits to 2405 proteins in 320 species: Archae - 6; Bacteria - 1196; Metazoa - 1107; Fungi - 390; Plants - 165; Viruses - 17; Other Eukaryotes - 747 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative BIN4, Description = DNA-binding protein BIN4, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03768_199956-204390' '(at5g24600 : 285.0) Protein of unknown function, DUF599; INVOLVED IN: biological_process unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF599 (InterPro:IPR006747); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF599 (TAIR:AT3G18215.1). & (gnl|cdd|68233 : 222.0) no description available & (reliability: 570.0) & (original description: Putative At5g24600, Description = At5g24600, PFAM = PF04654)' T '35.2' 'not assigned.unknown' 'niben101scf03768_302579-306113' '(at1g18010 : 522.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G18000.1); Has 758 Blast hits to 750 proteins in 174 species: Archae - 0; Bacteria - 91; Metazoa - 141; Fungi - 422; Plants - 82; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|38308 : 252.0) no description available & (reliability: 1044.0) & (original description: Putative At1g18000, Description = UNC93-like protein 1, PFAM = PF05978)' T '35.2' 'not assigned.unknown' 'niben101scf03768_316787-319697' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03770_117115-126100' '(at5g58110 : 231.0) chaperone binding;ATPase activators; FUNCTIONS IN: ATPase activator activity, chaperone binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Activator of Hsp90 ATPase, N-terminal (InterPro:IPR015310); Has 297 Blast hits to 292 proteins in 99 species: Archae - 0; Bacteria - 0; Metazoa - 161; Fungi - 2; Plants - 78; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative At5g58110, Description = AT5g58110/k21l19_90, PFAM = PF09229)' T '35.2' 'not assigned.unknown' 'niben101scf03772_128018-144676' '(at5g47400 : 838.0) unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1676.0) & (original description: Putative BnaC07g20180D, Description = BnaC07g20180D protein, PFAM = PF14724)' T '35.2' 'not assigned.unknown' 'niben101scf03776_5033-9340' '(at1g26750 : 154.0) unknown protein; Has 44 Blast hits to 44 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative glysoja_014486, Description = RanBP2-type zinc finger protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03778_63235-71793' '(at1g55160 : 110.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19530.1); Has 63 Blast hits to 63 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative CA608558, Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03778_184157-193905' '(at1g55170 : 197.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 13439 Blast hits to 8993 proteins in 828 species: Archae - 344; Bacteria - 1469; Metazoa - 6958; Fungi - 1008; Plants - 683; Viruses - 29; Other Eukaryotes - 2948 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative FLXL3, Description = Protein FLX-like 3, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03779_499300-508477' '(at2g40070 : 156.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1); Has 108635 Blast hits to 60786 proteins in 2176 species: Archae - 287; Bacteria - 15142; Metazoa - 39415; Fungi - 26849; Plants - 4416; Viruses - 2864; Other Eukaryotes - 19662 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative At2g40070, Description = ATP-binding protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03785_62660-72628' ' (original description: Putative At1g21160, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03786_422926-425423' '(atmg00660 : 139.0) hypothetical protein; unknown protein. & (reliability: 278.0) & (original description: Putative orf185, Description = Orf129b protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03790_271075-273857' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03794_136518-138979' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03804_36378-39543' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF05922)' T '35.2' 'not assigned.unknown' 'niben101scf03804_1019012-1035346' '(at4g08280 : 119.0) Thioredoxin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin like (InterPro:IPR008554), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative CISIN_1g030511mg, Description = Glutaredoxin-like protein, PFAM = PF05768)' T '35.2' 'not assigned.unknown' 'niben101scf03805_246486-255573' '(at3g13410 : 245.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55546.1); Has 49 Blast hits to 49 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 490.0) & (original description: Putative BnaA03g32820D, Description = BnaA03g32820D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03810_619070-624724' '(at1g06660 : 206.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30820.2); Has 166 Blast hits to 144 proteins in 35 species: Archae - 0; Bacteria - 17; Metazoa - 13; Fungi - 20; Plants - 104; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative TCM_001947, Description = Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, putative isoform 5, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03810_994255-1009122' ' (original description: Putative TaGCN2, Description = GCN2-type protein kinase, PFAM = PF00069)' T '35.2' 'not assigned.unknown' 'niben101scf03815_48374-57084' '(at2g25920 : 164.0) BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein (TAIR:AT2G25910.2); Has 131 Blast hits to 125 proteins in 54 species: Archae - 0; Bacteria - 50; Metazoa - 12; Fungi - 12; Plants - 41; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative , Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03817_228400-233638' '(at1g08440 : 359.0) Aluminium activated malate transporter family protein; INVOLVED IN: response to aluminum ion; CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: aluminum-activated malate transporter 1 (TAIR:AT1G08430.1); Has 610 Blast hits to 608 proteins in 146 species: Archae - 0; Bacteria - 224; Metazoa - 0; Fungi - 10; Plants - 352; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|39909 : 309.0) no description available & (gnl|cdd|85194 : 158.0) no description available & (reliability: 718.0) & (original description: Putative ALMT1, Description = Aluminum-activated malate transporter 1, PFAM = PF11744)' T '35.2' 'not assigned.unknown' 'niben101scf03817_310304-312753' ' no hits & (original description: Putative orf151, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03817_370553-373390' ' no hits & (original description: Putative , Description = , PFAM = PF11250)' T '35.2' 'not assigned.unknown' 'niben101scf03817_771663-791688' '(at5g22040 : 145.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown. & (reliability: 290.0) & (original description: Putative At5g22040, Description = At5g22040, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03817_893383-896798' '(at5g22090 : 120.0) Protein of unknown function (DUF3049); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) (TAIR:AT4G02810.1). & (reliability: 240.0) & (original description: Putative glysoja_032408, Description = Protein FAF-like, chloroplastic, PFAM = PF11250)' T '35.2' 'not assigned.unknown' 'niben101scf03817_1148144-1150593' ' (original description: Putative PRS3, Description = S3 self-incompatibility protein, PFAM = PF05938)' T '35.2' 'not assigned.unknown' 'niben101scf03817_1267005-1271150' ' no hits & (original description: Putative PGSC0003DMG400012178, Description = Putative ovule protein, PFAM = PF00847;PF00847)' T '35.2' 'not assigned.unknown' 'niben101scf03817_1481625-1484692' '(at3g52060 : 363.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G22070.1); Has 568 Blast hits to 568 proteins in 19 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 545; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|86287 : 316.0) no description available & (reliability: 726.0) & (original description: Putative PGSC0003DMG400005902, Description = Core-2/I-branching enzyme, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben101scf03819_91348-98468' '(at3g29180 : 528.0) Protein of unknown function (DUF1336); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT5G39430.1). & (gnl|cdd|70520 : 286.0) no description available & (reliability: 1056.0) & (original description: Putative At3g29180, Description = AT3G29180 protein, PFAM = PF07059)' T '35.2' 'not assigned.unknown' 'niben101scf03819_220172-239114' '(at5g15510 : 266.0) TPX2 (targeting protein for Xklp2) protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT3G01015.1). & (reliability: 532.0) & (original description: Putative MAP20, Description = TPX2 (Targeting protein for Xklp2) family protein, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'niben101scf03819_267274-273196' '(at3g01015 : 285.0) TPX2 (targeting protein for Xklp2) protein family; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT5G15510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 570.0) & (original description: Putative BnaC02g06090D, Description = BnaC02g06090D protein, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'niben101scf03819_283759-331020' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03819_346361-349500' '(at5g39210 : 98.2) Encodes a protein of the chloroplastic NAD(P)H dehydrogenase complex (NDH Complex) involved in respiration, photosystem I (PSI) cyclic electron transport and CO2 uptake. The product of this gene appears to be essential for the stable formation of the NDH Complex.; CHLORORESPIRATORY REDUCTION 7 (CRR7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: NAD(P)H dehydrogenase complex assembly; LOCATED IN: chloroplast, NAD(P)H dehydrogenase complex (plastoquinone), membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3571 (InterPro:IPR021954); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative CRR7, Description = Protein CHLORORESPIRATORY REDUCTION 7, chloroplastic, PFAM = PF12095)' T '35.2' 'not assigned.unknown' 'niben101scf03822_187412-197372' '(at4g38225 : 327.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 654.0) & (original description: Putative PGSC0003DMG400016829, Description = BnaA06g05700D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03823_234701-237462' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03823_330735-333079' ' no hits & (original description: Putative PGSC0003DMG400009174, Description = SAUR-like auxin-responsive protein family, PFAM = PF02519)' T '35.2' 'not assigned.unknown' 'niben101scf03824_43733-50579' '(at3g23090 : 191.0) TPX2 (targeting protein for Xklp2) protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf apex, inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: WVD2-like 1 (TAIR:AT3G04630.3). & (reliability: 382.0) & (original description: Putative WDL3, Description = Protein WVD2-like 3, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'niben101scf03824_211495-214181' ' no hits & (original description: Putative H1e, Description = Histone H1E, PFAM = PF00538)' T '35.2' 'not assigned.unknown' 'niben101scf03824_233356-241419' '(at3g23070 : 795.0) Encodes a CRM domain protein CFM3a, involved in group IIB intron splicing in chloroplasts.; CRM family member 3A (CFM3A); FUNCTIONS IN: RNA binding; INVOLVED IN: seed development, Group II intron splicing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: CRM family member 3B (TAIR:AT4G14510.1); Has 676 Blast hits to 606 proteins in 108 species: Archae - 3; Bacteria - 41; Metazoa - 114; Fungi - 55; Plants - 403; Viruses - 3; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|37201 : 426.0) no description available & (gnl|cdd|85815 : 92.1) no description available & (reliability: 1590.0) & (original description: Putative CFM3A, Description = CRM-domain containing factor CFM3A, chloroplastic/mitochondrial, PFAM = PF01985;PF01985;PF01985)' T '35.2' 'not assigned.unknown' 'niben101scf03824_328899-331402' ' (original description: Putative PGSC0003DMG400006110, Description = Prenylated rab acceptor PRA1, PFAM = PF03208)' T '35.2' 'not assigned.unknown' 'niben101scf03834_447267-449795' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03839_190973-193584' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03839_390415-394810' '(at2g26070 : 289.0) Encodes a predicted membrane protein. Similar sequences are widely distributed and conserved in plants, animals and protists but absent in fungi and prokaryotes. The sequence has no known motifs and no biological function has been assigned in any species. In Arabidopsis, it appears to be involved in the negative regulation of the response to ethylene, is localized to the Golgi and is a positive regulator of ETR1.; REVERSION-TO-ETHYLENE SENSITIVITY1 (RTE1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF778 (InterPro:IPR008496); BEST Arabidopsis thaliana protein match is: RTE1-homolog (TAIR:AT3G51040.3); Has 292 Blast hits to 292 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (gnl|cdd|69146 : 229.0) no description available & (gnl|cdd|38360 : 215.0) no description available & (reliability: 578.0) & (original description: Putative RTE1, Description = Reversion-to-ethylene sensitivity 1, PFAM = PF05608;PF05608)' T '35.2' 'not assigned.unknown' 'niben101scf03839_415785-421086' '(at5g11840 : 288.0) Protein of unknown function (DUF1230); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1230 (InterPro:IPR009631); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1230) (TAIR:AT5G67370.1); Has 313 Blast hits to 313 proteins in 90 species: Archae - 0; Bacteria - 114; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (gnl|cdd|70275 : 199.0) no description available & (reliability: 576.0) & (original description: Putative ycf36, Description = Uncharacterized protein ycf36, PFAM = PF06799)' T '35.2' 'not assigned.unknown' 'niben101scf03839_553551-873092' ' (original description: Putative POLX, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03839_821978-825048' '(at2g26110 : 90.9) Protein of unknown function (DUF761); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G56980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative PGSC0003DMG400035559, Description = AT4g26130/F20B18_240, PFAM = PF14364;PF05553)' T '35.2' 'not assigned.unknown' 'niben101scf03839_923618-926424' '(at5g11890 : 127.0) FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G17620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70773 : 89.6) no description available & (reliability: 254.0) & (original description: Putative BnaAnng41530D, Description = BnaAnng41530D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03842_90389-94884' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03842_988925-991404' ' no hits & (original description: Putative , Description = , PFAM = PF00646)' T '35.2' 'not assigned.unknown' 'niben101scf03848_698324-700572' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03850_359545-373901' '(at1g80000 : 202.0) CASC3/Barentsz eIF4AIII binding; CONTAINS InterPro DOMAIN/s: CASC3/Barentsz eIF4AIII binding (InterPro:IPR018545); BEST Arabidopsis thaliana protein match is: CASC3/Barentsz eIF4AIII binding (TAIR:AT1G15280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative Os01g0595100, Description = Glycine-rich family protein, PFAM = PF09405)' T '35.2' 'not assigned.unknown' 'niben101scf03851_12855-16781' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03851_235324-237749' ' (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf03851_293241-301068' '(at3g02420 : 434.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0121 (InterPro:IPR005344); Has 72 Blast hits to 71 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 60; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 868.0) & (original description: Putative Sb03g027180, Description = Putative uncharacterized protein Sb03g027180, PFAM = PF03661)' T '35.2' 'not assigned.unknown' 'niben101scf03852_1-1367' ' no hits & (original description: Putative PGSC0003DMG400024162, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03852_13311-21977' '(at4g17010 : 117.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative At4g17010, Description = AT4g17010/dl4535w, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03852_267384-274172' '(at5g47090 : 257.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2052, coiled-coil (InterPro:IPR018613); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38254 : 151.0) no description available & (reliability: 514.0) & (original description: Putative At5g47090, Description = AT5g47090/K14A3_4, PFAM = PF09747)' T '35.2' 'not assigned.unknown' 'niben101scf03853_232455-234954' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf03854_193284-201199' '(at4g39790 : 470.0) Protein of unknown function (DUF630 and DUF632); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT2G27090.1); Has 571 Blast hits to 465 proteins in 32 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 6; Plants - 555; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68357 : 295.0) no description available & (reliability: 940.0) & (original description: Putative LOC100217082, Description = , PFAM = PF04782;PF04783)' T '35.2' 'not assigned.unknown' 'niben101scf03855_311908-329521' ' no hits & (original description: Putative PGSC0003DMG402010654, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03855_531511-534438' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03856_107980-110712' '(at1g79190 : 155.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 200 Blast hits to 184 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 76; Fungi - 76; Plants - 39; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03856_400203-407899' '(at1g79090 : 666.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Topoisomerase II-associated protein PAT1 (InterPro:IPR019167); BEST Arabidopsis thaliana protein match is: Topoisomerase II-associated protein PAT1 (TAIR:AT3G22270.1); Has 1260 Blast hits to 1163 proteins in 186 species: Archae - 0; Bacteria - 32; Metazoa - 596; Fungi - 277; Plants - 212; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (reliability: 1332.0) & (original description: Putative At1g79090, Description = AT1G79090 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03857_177975-182405' ' no hits & (original description: Putative TCM_008314, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03857_220711-224311' '(at4g15830 : 319.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G01450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38144 : 196.0) no description available & (reliability: 638.0) & (original description: Putative , Description = Heparan-alpha-glucosaminide N-acetyltransferase, PFAM = PF12348)' T '35.2' 'not assigned.unknown' 'niben101scf03860_423587-425946' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03863_404914-407507' '(at3g57950 : 109.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42180.1); Has 81 Blast hits to 81 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative BnaC09g48790D, Description = BnaC09g48790D protein, PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben101scf03865_331794-335092' ' (original description: Putative ODC, Description = Ornithine decarboxylase, PFAM = PF02784;PF00278)' T '35.2' 'not assigned.unknown' 'niben101scf03867_222549-225587' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03867_230439-233595' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03868_144558-147831' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03868_280503-286688' '(at1g13380 : 231.0) Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT4G27435.1); Has 523 Blast hits to 523 proteins in 97 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 523; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70227 : 120.0) no description available & (reliability: 462.0) & (original description: Putative Sb10g018720, Description = Putative uncharacterized protein Sb10g018720, PFAM = PF06749)' T '35.2' 'not assigned.unknown' 'niben101scf03870_155319-157855' ' (original description: Putative L484_008417, Description = RING-H2 finger protein ATL47, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf03870_157349-160930' '(at3g01450 : 326.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G14790.1); Has 261 Blast hits to 260 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 10; Plants - 111; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|38144 : 263.0) no description available & (reliability: 652.0) & (original description: Putative , Description = Heparan-alpha-glucosaminide N-acetyltransferase, PFAM = PF12348)' T '35.2' 'not assigned.unknown' 'niben101scf03872_194089-196538' ' no hits & (original description: Putative , Description = , PFAM = PF03634)' T '35.2' 'not assigned.unknown' 'niben101scf03873_1-2384' ' no hits & (original description: Putative PGSC0003DMG400020979, Description = Putative B3 domain-containing protein-like, PFAM = PF02362)' T '35.2' 'not assigned.unknown' 'niben101scf03873_48837-80443' ' no hits & (original description: Putative TCM_025728, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03875_40637-59155' '(at1g69380 : 453.0) Protein of unknown function (DUF155); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF155 (InterPro:IPR003734); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF155) (TAIR:AT5G13610.1); Has 567 Blast hits to 567 proteins in 242 species: Archae - 0; Bacteria - 202; Metazoa - 8; Fungi - 221; Plants - 79; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (gnl|cdd|38072 : 254.0) no description available & (gnl|cdd|31909 : 93.8) no description available & (reliability: 906.0) & (original description: Putative BnaA07g27920D, Description = BnaA07g27920D protein, PFAM = PF02582)' T '35.2' 'not assigned.unknown' 'niben101scf03875_63403-67513' '(at2g03350 : 230.0) Protein of unknown function, DUF538; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT3G08890.2); Has 544 Blast hits to 544 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 543; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|86647 : 130.0) no description available & (reliability: 460.0) & (original description: Putative BnaCnng40610D, Description = BnaCnng40610D protein, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben101scf03875_76519-81305' '(at2g03360 : 406.0) Glycosyltransferase family 61 protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycosyltransferase AER61, uncharacterised (InterPro:IPR007657); BEST Arabidopsis thaliana protein match is: Glycosyltransferase family 61 protein (TAIR:AT2G03370.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39896 : 306.0) no description available & (gnl|cdd|68160 : 239.0) no description available & (reliability: 812.0) & (original description: Putative At2g03360, Description = Glycosyltransferase family 61 protein, PFAM = PF04577)' T '35.2' 'not assigned.unknown' 'niben101scf03877_39120-41438' ' no hits & (original description: Putative , Description = , PFAM = PF00646;PF07734)' T '35.2' 'not assigned.unknown' 'niben101scf03878_52994-55597' ' no hits & (original description: Putative TER1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf03878_112945-115529' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf03879_79509-85627' ' no hits & (original description: Putative Os02g0530850, Description = Putative ovule protein, PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben101scf03879_82803-85600' ' no hits & (original description: Putative PGSC0003DMG400003494, Description = Putative ovule protein, PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben101scf03885_551480-554537' ' no hits & (original description: Putative RPS30A, Description = 40S ribosomal protein S30, PFAM = PF04758)' T '35.2' 'not assigned.unknown' 'niben101scf03885_996774-999091' ' no hits & (original description: Putative PGSC0003DMG400021777, Description = Zinc finger, RING/FYVE/PHD-type, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf03886_469259-478636' '(at5g63550 : 145.0) DEK domain-containing chromatin associated protein; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: DEK domain-containing chromatin associated protein (TAIR:AT3G48710.1); Has 125696 Blast hits to 60701 proteins in 2642 species: Archae - 319; Bacteria - 14791; Metazoa - 55294; Fungi - 15186; Plants - 6064; Viruses - 1107; Other Eukaryotes - 32935 (source: NCBI BLink). & (gnl|cdd|37477 : 83.7) no description available & (reliability: 290.0) & (original description: Putative ZOSMA_225G00260, Description = Protein DEK, PFAM = PF08766)' T '35.2' 'not assigned.unknown' 'niben101scf03889_251177-254253' ' no hits & (original description: Putative Dif54, Description = Extensin-like protein Dif54, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03891_241323-243879' ' no hits & (original description: Putative TCM_019384, Description = 50S ribosomal protein-related, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03894_117730-123610' '(at5g41960 : 141.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative BnaC06g13810D, Description = BnaC06g13810D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03894_208730-211244' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03894_242411-254111' '(at5g41950 : 603.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: protein import into mitochondrial outer membrane; LOCATED IN: mitochondrial outer membrane translocase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Plant specific mitochondrial import receptor subunit TOM20 (InterPro:IPR010547); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1206.0) & (original description: Putative At5g41950, Description = At5g41950, PFAM = PF06552)' T '35.2' 'not assigned.unknown' 'niben101scf03894_266765-269229' '(at4g24130 : 199.0) Protein of unknown function, DUF538; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT5G46230.1); Has 362 Blast hits to 362 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86647 : 130.0) no description available & (reliability: 398.0) & (original description: Putative SVB, Description = At1g56580/F25P12_18, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben101scf03894_589553-597488' '(at1g73940 : 128.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49410.2); Has 54 Blast hits to 54 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative TCM_015569, Description = Tumor necrosis factor receptor superfamily member 21, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03895_71351-83358' '(at1g20830 : 287.0) Encodes MCD1 (MULTIPLE CHLOROPLAST DIVISION SITE 1). Determines the site of chloroplast division in concert with MinD (AT5G24020).; MULTIPLE CHLOROPLAST DIVISION SITE 1 (MCD1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chloroplast fission; LOCATED IN: chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 38 Blast hits to 38 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 574.0) & (original description: Putative MCD1, Description = Protein MULTIPLE CHLOROPLAST DIVISION SITE 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03898_137176-142822' ' no hits & (original description: Putative PGSC0003DMG400002067, Description = WD repeat-containing 70, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03903_424836-429315' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03903_535752-545375' '(at2g42570 : 475.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 39 (TBL39); INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT2G31110.2); Has 1331 Blast hits to 1312 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1329; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 194.0) no description available & (reliability: 950.0) & (original description: Putative TBL39, Description = Protein trichome birefringence-like 39, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf03905_274852-279550' ' no hits & (original description: Putative PGSC0003DMG400021845, Description = , PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'niben101scf03906_89074-96040' '(at1g11400 : 113.0) The PYM gene encodes a protein capable of interacting with MAGO, and Y14, whose orthologs form part of the exon junction complex in animal cells. In vitro binding assays indicate that PYM can bind to MAGO and Y14 either individually, or when they are together. But, MAGO-Y14-PYM ternary complexes are difficult to detect in vivo in Arabidopsis based on pull-down experiments. However there is some evidence for a weak association in Arabidopsis flowers. PYM appears primarily cytoplasmic, but it also seems to into the nucleus at times. Its nuclear localization signal has not been rigorously defined, but there is evidence for a nuclear export signal between amino acids 171-205 in the C-terminus.; partner of Y14-MAGO (PYM); FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleoplasm, nucleolus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Exon junction complex, Pym (InterPro:IPR015362); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39526 : 111.0) no description available & (reliability: 226.0) & (original description: Putative PYM, Description = Partner of Y14-mago, PFAM = PF09282)' T '35.2' 'not assigned.unknown' 'niben101scf03906_254925-258541' '(at1g68140 : 291.0) Protein of unknown function (DUF1644); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1644) (TAIR:AT4G08460.3). & (gnl|cdd|71240 : 246.0) no description available & (reliability: 582.0) & (original description: Putative F383_15749, Description = Small nuclear ribonucleoprotein-associated B, PFAM = PF07800)' T '35.2' 'not assigned.unknown' 'niben101scf03906_330164-337642' '(at1g36990 : 109.0) unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in 339 species: Archae - 2; Bacteria - 1372; Metazoa - 990; Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes - 1593 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03907_82915-86318' '(at5g51670 : 440.0) Protein of unknown function (DUF668); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700), Protein of unknown function DUF3475 (InterPro:IPR021864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT5G04550.1); Has 324 Blast hits to 279 proteins in 20 species: Archae - 0; Bacteria - 1; Metazoa - 2; Fungi - 0; Plants - 319; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68572 : 126.0) no description available & (reliability: 880.0) & (original description: Putative BnaAnng08110D, Description = BnaAnng08110D protein, PFAM = PF05003;PF11961)' T '35.2' 'not assigned.unknown' 'niben101scf03907_130371-132664' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03907_173655-183432' '(at4g22860 : 137.0) Cell cycle regulated microtubule associated protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Cell cycle regulated microtubule associated protein (InterPro:IPR022021); BEST Arabidopsis thaliana protein match is: Cell cycle regulated microtubule associated protein (TAIR:AT4G11990.1); Has 104 Blast hits to 96 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 3; Plants - 81; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative PGSC0003DMG400031013, Description = , PFAM = PF12214)' T '35.2' 'not assigned.unknown' 'niben101scf03911_511976-518042' '(at1g27300 : 82.0) unknown protein; Has 54 Blast hits to 54 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 6; Plants - 34; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative PGSC0003DMG400034312, Description = Uncharacterized protein isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03913_186299-189701' ' no hits & (original description: Putative DH3, Description = Dehydrin, PFAM = PF00257;PF00257)' T '35.2' 'not assigned.unknown' 'niben101scf03915_404587-409706' ' no hits & (original description: Putative Sb04g007690, Description = Putative uncharacterized protein Sb04g007690, PFAM = PF15346)' T '35.2' 'not assigned.unknown' 'niben101scf03918_138914-148814' '(at3g55070 : 565.0) LisH/CRA/RING-U-box domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein, CRA domain (InterPro:IPR019589), CTLH, C-terminal LisH motif (InterPro:IPR006595), LisH dimerisation motif (InterPro:IPR006594), Ran binding protein-like, CRA domain (InterPro:IPR013144); BEST Arabidopsis thaliana protein match is: LisH/CRA/RING-U-box domains-containing protein (TAIR:AT4G37880.1); Has 813 Blast hits to 810 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 347; Fungi - 254; Plants - 147; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|35617 : 417.0) no description available & (reliability: 1130.0) & (original description: Putative maea, Description = Lissencephaly type-1-like motif-containing protein, PFAM = PF10607)' T '35.2' 'not assigned.unknown' 'niben101scf03923_1509527-1516521' '(at1g03055 : 216.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative D27, Description = Beta-carotene isomerase D27, PFAM = PF13225)' T '35.2' 'not assigned.unknown' 'niben101scf03924_400219-404331' ' no hits & (original description: Putative orf202, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03924_400698-403303' ' no hits & (original description: Putative orf202, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03925_283520-288475' '(at3g63430 : 190.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74160.1); Has 135 Blast hits to 119 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 3; Plants - 119; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 380.0) & (original description: Putative PGSC0003DMG400022986, Description = At3g63430, PFAM = PF14383;PF14309)' T '35.2' 'not assigned.unknown' 'niben101scf03927_61702-66354' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03929_130668-143888' '(at4g38360 : 728.0) Protein of unknown function (DUF300); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT1G77220.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|67249 : 332.0) no description available & (gnl|cdd|37852 : 310.0) no description available & (reliability: 1456.0) & (original description: Putative LAZ1, Description = Protein LAZ1, PFAM = PF03619)' T '35.2' 'not assigned.unknown' 'niben101scf03929_579310-582168' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03930_126234-128724' ' no hits & (original description: Putative BnaA03g00170D, Description = BnaA03g00170D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03930_270790-275342' '(at1g52590 : 207.0) Putative thiol-disulphide oxidoreductase DCC; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Putative thiol-disulphide oxidoreductase DCC (InterPro:IPR007263); BEST Arabidopsis thaliana protein match is: Putative thiol-disulphide oxidoreductase DCC (TAIR:AT1G24095.1); Has 955 Blast hits to 955 proteins in 365 species: Archae - 5; Bacteria - 640; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 232 (source: NCBI BLink). & (gnl|cdd|32828 : 117.0) no description available & (reliability: 414.0) & (original description: Putative At1g52590, Description = DCC family protein At1g52590, chloroplastic, PFAM = PF04134)' T '35.2' 'not assigned.unknown' 'niben101scf03930_415944-418557' ' no hits & (original description: Putative , Description = , PFAM = PF15697)' T '35.2' 'not assigned.unknown' 'niben101scf03930_478399-481610' '(at5g11280 : 161.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative PGSC0003DMG401000630, Description = BnaA02g19930D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03930_508371-511031' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03930_517513-520130' ' no hits & (original description: Putative PM30, Description = Late embryogenesis abundant protein (LEA) family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03932_94401-99258' ' no hits & (original description: Putative Glyma08g10220.1, Description = ZIM transcription factor, PFAM = PF09425;PF06200)' T '35.2' 'not assigned.unknown' 'niben101scf03934_184282-190148' '(at3g04300 : 137.0) RmlC-like cupins superfamily protein; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Protein of unknown function DUF861, cupin-3 (InterPro:IPR008579), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT4G10300.1); Has 512 Blast hits to 512 proteins in 136 species: Archae - 0; Bacteria - 273; Metazoa - 0; Fungi - 0; Plants - 140; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (gnl|cdd|69424 : 91.8) no description available & (reliability: 274.0) & (original description: Putative At4g10300, Description = At4g10300, PFAM = PF05899)' T '35.2' 'not assigned.unknown' 'niben101scf03937_44883-70031' '(at5g24750 : 551.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G07020.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|32004 : 86.3) no description available & (reliability: 1102.0) & (original description: Putative BnaC02g41080D, Description = BnaC02g41080D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03937_205582-208679' '(at2g26070 : 325.0) Encodes a predicted membrane protein. Similar sequences are widely distributed and conserved in plants, animals and protists but absent in fungi and prokaryotes. The sequence has no known motifs and no biological function has been assigned in any species. In Arabidopsis, it appears to be involved in the negative regulation of the response to ethylene, is localized to the Golgi and is a positive regulator of ETR1.; REVERSION-TO-ETHYLENE SENSITIVITY1 (RTE1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF778 (InterPro:IPR008496); BEST Arabidopsis thaliana protein match is: RTE1-homolog (TAIR:AT3G51040.3); Has 292 Blast hits to 292 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (gnl|cdd|69146 : 217.0) no description available & (gnl|cdd|38360 : 206.0) no description available & (reliability: 650.0) & (original description: Putative RTE1, Description = Protein REVERSION-TO-ETHYLENE SENSITIVITY1, PFAM = PF05608;PF05608)' T '35.2' 'not assigned.unknown' 'niben101scf03937_235146-261544' '(at1g71240 : 869.0) Plant protein of unknown function (DUF639); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF639 (InterPro:IPR006927); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF639) (TAIR:AT1G48840.1); Has 140 Blast hits to 137 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 140; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68417 : 590.0) no description available & (reliability: 1738.0) & (original description: Putative Sb03g041060, Description = Putative uncharacterized protein Sb03g041060, PFAM = PF04842)' T '35.2' 'not assigned.unknown' 'niben101scf03937_273162-280358' '(at5g24690 : 574.0) INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: reticulata-related 1 (TAIR:AT5G22790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1148.0) & (original description: Putative CGL34, Description = AT5g24690/MXC17_8, PFAM = PF11891)' T '35.2' 'not assigned.unknown' 'niben101scf03939_616938-623165' ' (original description: Putative apaG, Description = Protein ApaG, PFAM = PF04379;PF02151;PF02151)' T '35.2' 'not assigned.unknown' 'niben101scf03939_736517-742806' '(at5g50290 : 343.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 300 Blast hits to 300 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 300; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 686.0) & (original description: Putative BnaA03g23400D, Description = BnaA03g23400D protein, PFAM = PF13947)' T '35.2' 'not assigned.unknown' 'niben101scf03941_74160-91792' ' no hits & (original description: Putative BnaA03g08450D, Description = BnaA03g08450D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03941_351114-356096' '(at3g11590 : 313.0) unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22310.1); Has 22320 Blast hits to 15179 proteins in 1213 species: Archae - 372; Bacteria - 2307; Metazoa - 10906; Fungi - 1700; Plants - 1146; Viruses - 65; Other Eukaryotes - 5824 (source: NCBI BLink). & (reliability: 626.0) & (original description: Putative F24K9.26, Description = At3g11590/F24K9_26, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03942_43420-46046' '(at1g52140 : 100.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative , Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben101scf03942_125531-128010' '(at1g52140 : 93.2) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative , Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben101scf03944_249059-254763' ' no hits & (original description: Putative RPL29A, Description = 60S ribosomal protein L29-1, PFAM = PF01779)' T '35.2' 'not assigned.unknown' 'niben101scf03944_425157-427504' ' no hits & (original description: Putative , Description = Transposon MuDR mudrA-like protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03947_60943-66221' '(at5g66090 : 206.0) unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 412.0) & (original description: Putative PGSC0003DMG400003653, Description = Universal stress family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03949_87379-89693' ' no hits & (original description: Putative , Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf03949_111938-116744' ' no hits & (original description: Putative Os11g0242700, Description = Expressed protein, PFAM = PF11759)' T '35.2' 'not assigned.unknown' 'niben101scf03949_601924-607755' '(at1g71310 : 229.0) cobalt ion binding; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative PGSC0003DMG400001162, Description = Organellar dna-binding protein, PFAM = PF04098)' T '35.2' 'not assigned.unknown' 'niben101scf03949_723272-725598' ' no hits & (original description: Putative , Description = Mutant gag-pol polyprotein, PFAM = PF03732)' T '35.2' 'not assigned.unknown' 'niben101scf03951_197453-201314' '(at2g45610 : 370.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G45600.1); Has 6944 Blast hits to 6930 proteins in 1305 species: Archae - 101; Bacteria - 4054; Metazoa - 322; Fungi - 575; Plants - 1325; Viruses - 3; Other Eukaryotes - 564 (source: NCBI BLink). & (gnl|cdd|36728 : 241.0) no description available & (gnl|cdd|87389 : 154.0) no description available & (q6l545|gid1_orysa : 125.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 740.0) & (original description: Putative CXE9, Description = Probable carboxylesterase 9, PFAM = PF07859)' T '35.2' 'not assigned.unknown' 'niben101scf03952_39464-41949' ' no hits & (original description: Putative At2g06320, Description = Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03952_68659-83308' '(at3g61690 : 1094.0) nucleotidyltransferases; FUNCTIONS IN: nucleotidyltransferase activity; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934); BEST Arabidopsis thaliana protein match is: PAP/OAS1 substrate-binding domain superfamily (TAIR:AT3G51620.2); Has 793 Blast hits to 566 proteins in 156 species: Archae - 0; Bacteria - 43; Metazoa - 182; Fungi - 92; Plants - 200; Viruses - 0; Other Eukaryotes - 276 (source: NCBI BLink). & (gnl|cdd|37117 : 200.0) no description available & (reliability: 2188.0) & (original description: Putative BnaC06g17980D, Description = BnaC06g17980D protein, PFAM = PF01909)' T '35.2' 'not assigned.unknown' 'niben101scf03952_188628-191071' ' (original description: Putative , Description = Lipid transfer protein, PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'niben101scf03952_191840-194178' ' no hits & (original description: Putative PGSC0003DMG400000218, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03952_235187-237537' ' no hits & (original description: Putative , Description = Lipid transfer protein, PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'niben101scf03952_628439-633837' '(at5g36000 : 398.0) BEST Arabidopsis thaliana protein match is: reduced male fertility (TAIR:AT3G61730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 796.0) & (original description: Putative RMF, Description = Probable F-box protein At3g61730, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03954_62551-70076' '(at1g43580 : 590.0) Sphingomyelin synthetase family protein; Has 50 Blast hits to 47 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|38268 : 178.0) no description available & (reliability: 1180.0) & (original description: Putative BnaA02g13330D, Description = BnaA02g13330D protein, PFAM = PF14360)' T '35.2' 'not assigned.unknown' 'niben101scf03962_283916-292537' '(at4g30900 : 543.0) DNAse I-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1086.0) & (original description: Putative At4g30900, Description = Endonuclease/exonuclease/phosphatase domain-containing protein, PFAM = PF03372)' T '35.2' 'not assigned.unknown' 'niben101scf03963_119176-124226' '(at1g08220 : 254.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitochondrial proton-transporting ATP synthase complex assembly; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase assembly factor ATP10, mitochondria (InterPro:IPR007849); Has 152 Blast hits to 152 proteins in 76 species: Archae - 6; Bacteria - 0; Metazoa - 2; Fungi - 92; Plants - 30; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|39814 : 127.0) no description available & (gnl|cdd|68738 : 127.0) no description available & (reliability: 508.0) & (original description: Putative LOC100282465, Description = ATP10 protein, PFAM = PF05176)' T '35.2' 'not assigned.unknown' 'niben101scf03963_278530-281233' '(at2g27900 : 162.0) CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38150 : 87.8) no description available & (reliability: 324.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03964_259059-261463' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03965_123385-126998' ' no hits & (original description: Putative At3g13980, Description = Protein BIG GRAIN 1-like A, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03965_324790-332064' '(at1g72640 : 310.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 620.0) & (original description: Putative At1g72640, Description = At1g72640, PFAM = PF13460)' T '35.2' 'not assigned.unknown' 'niben101scf03969_141412-145119' ' no hits & (original description: Putative F383_02089, Description = 3-phosphoshikimate 1-carboxyvinyltransferase, PFAM = PF02833)' T '35.2' 'not assigned.unknown' 'niben101scf03969_467166-469384' ' no hits & (original description: Putative PGSC0003DMG400021235, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03971_176390-181587' '(at1g26470 : 102.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, H4/H2A histone acetyltransferase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CT20 (InterPro:IPR012423); Has 60 Blast hits to 60 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 2; Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative BnaC07g12260D, Description = BnaC07g12260D protein, PFAM = PF07904)' T '35.2' 'not assigned.unknown' 'niben101scf03971_279141-283509' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03971_362290-365047' ' no hits & (original description: Putative AFP2, Description = Ninja-family protein AFP2, PFAM = PF07897;PF16136)' T '35.2' 'not assigned.unknown' 'niben101scf03973_34641-40105' '(at1g08390 : 107.0) unknown protein; Has 62 Blast hits to 62 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 34; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative , Description = , PFAM = PF16100)' T '35.2' 'not assigned.unknown' 'niben101scf03977_100610-104245' '(gnl|cdd|68298 : 190.0) no description available & (at1g12030 : 158.0) Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT1G62420.1); Has 393 Blast hits to 391 proteins in 26 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 387; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative , Description = , PFAM = PF04720)' T '35.2' 'not assigned.unknown' 'niben101scf03977_355890-358735' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03978_499012-594459' '(at5g27970 : 1987.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF1981, SEC7 associated (InterPro:IPR015403); BEST Arabidopsis thaliana protein match is: HOPM interactor 7 (TAIR:AT3G43300.1). & (gnl|cdd|37059 : 999.0) no description available & (reliability: 3974.0) & (original description: Putative , Description = , PFAM = PF16206;PF16206;PF09324;PF12783;PF16213)' T '35.2' 'not assigned.unknown' 'niben101scf03978_697616-700728' ' no hits & (original description: Putative PGSC0003DMG400037321, Description = CASP-like protein, PFAM = PF04535)' T '35.2' 'not assigned.unknown' 'niben101scf03979_112726-116244' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03979_202999-212387' ' no hits & (original description: Putative Sb10g028450, Description = Putative uncharacterized protein Sb10g028450, PFAM = PF07466)' T '35.2' 'not assigned.unknown' 'niben101scf03985_146713-160366' ' no hits & (original description: Putative AGP41, Description = Arabinogalactan protein 41, PFAM = PF06376)' T '35.2' 'not assigned.unknown' 'niben101scf03985_222811-226976' ' no hits & (original description: Putative PGSC0003DMG400012162, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03985_222823-236091' ' no hits & (original description: Putative PGSC0003DMG400012162, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03985_351986-358724' '(at4g11090 : 485.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 23 (TBL23); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 24 (TAIR:AT4G23790.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|72785 : 153.0) no description available & (reliability: 970.0) & (original description: Putative TBL23, Description = Protein trichome birefringence-like 23, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf03985_435777-438265' '(at5g41810 : 105.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 514 Blast hits to 437 proteins in 98 species: Archae - 0; Bacteria - 21; Metazoa - 115; Fungi - 53; Plants - 52; Viruses - 5; Other Eukaryotes - 268 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative At5g41810, Description = BnaA07g15500D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03985_503935-506420' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03985_511265-517176' '(at5g41850 : 288.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cutinase (InterPro:IPR000675); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38463 : 184.0) no description available & (gnl|cdd|33373 : 87.4) no description available & (reliability: 576.0) & (original description: Putative At5g41850, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12695)' T '35.2' 'not assigned.unknown' 'niben101scf03985_579297-584732' '(at1g01360 : 285.0) Encodes RCAR1 (regulatory components of ABA receptor). Interacts with and regulates the type 2C protein phosphatases (PP2Cs) ABI1 and ABI2. Functions as abscisic acid sensor.; regulatory component of ABA receptor 1 (RCAR1); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: PYR1-like 7 (TAIR:AT4G01026.1); Has 395 Blast hits to 395 proteins in 28 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 392; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 570.0) & (original description: Putative PYL9, Description = Abscisic acid receptor PYL9, PFAM = PF10604)' T '35.2' 'not assigned.unknown' 'niben101scf03988_29406-36717' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03990_99897-103413' ' (original description: Putative S1FA2, Description = DNA-binding protein S1FA2, PFAM = PF04689)' T '35.2' 'not assigned.unknown' 'niben101scf03990_154356-160382' '(at2g37110 : 284.0) PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT2G40935.1); Has 380 Blast hits to 379 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 19; Plants - 350; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 568.0) & (original description: Putative CNR8, Description = Cell number regulator 8, PFAM = PF04749)' T '35.2' 'not assigned.unknown' 'niben101scf03990_182721-186104' ' no hits & (original description: Putative PGSC0003DMG400001743, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03990_262367-265413' '(at5g03110 : 93.6) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: protamine P1 family protein (TAIR:AT2G37100.1); Has 81 Blast hits to 73 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf03990_292751-302237' '(at3g09730 : 166.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages. & (reliability: 332.0) & (original description: Putative PGSC0003DMG400001741, Description = Retinitis pigmentosa 1-like 1 protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf03998_29778-32308' '(at1g72510 : 123.0) Protein of unknown function (DUF1677); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1677, plant (InterPro:IPR012876); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1677) (TAIR:AT2G09970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|71349 : 120.0) no description available & (reliability: 246.0) & (original description: Putative BnaA02g05020D, Description = BnaA02g05020D protein, PFAM = PF07911)' T '35.2' 'not assigned.unknown' 'niben101scf04000_13922-20177' '(at2g16760 : 382.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: SMP-30/Gluconolaconase/LRE-like region (InterPro:IPR013658), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT2G47370.1); Has 136 Blast hits to 136 proteins in 42 species: Archae - 0; Bacteria - 57; Metazoa - 0; Fungi - 2; Plants - 73; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 764.0) & (original description: Putative At2g16760, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04000_199704-202951' '(at2g47360 : 124.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02570.1); Has 58 Blast hits to 55 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative PGSC0003DMG401009045, Description = At1g02570, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04001_621941-633974' '(at3g57570 : 334.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024). & (reliability: 668.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04001_621947-654378' '(at3g57570 : 773.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024). & (reliability: 1546.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04003_982242-1004501' '(at4g34090 : 418.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23370.1). & (reliability: 836.0) & (original description: Putative Os03g0109700, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04003_1206374-1208691' ' (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04006_49383-59882' '(at5g48340 : 397.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages. & (reliability: 794.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04007_12457-55677' '(at3g53010 : 279.0) Domain of unknown function (DUF303) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF303, acetylesterase putative (InterPro:IPR005181); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF303) (TAIR:AT4G34215.2); Has 339 Blast hits to 339 proteins in 106 species: Archae - 2; Bacteria - 221; Metazoa - 0; Fungi - 1; Plants - 86; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|86388 : 80.0) no description available & (reliability: 558.0) & (original description: Putative LOC100217031, Description = Receptor protein kinase-like protein, PFAM = PF03629)' T '35.2' 'not assigned.unknown' 'niben101scf04007_502600-518765' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04011_64804-67228' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04011_141227-143823' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04015_23135-30608' ' no hits & (original description: Putative glysoja_022708, Description = , PFAM = PF11250)' T '35.2' 'not assigned.unknown' 'niben101scf04016_45159-48851' ' no hits & (original description: Putative def7, Description = Defensin, PFAM = PF00304)' T '35.2' 'not assigned.unknown' 'niben101scf04018_82155-98765' '(at2g30695 : 159.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative TCM_019901, Description = Transport, ribosome-binding, bacterial, putative isoform 2, PFAM = PF05697)' T '35.2' 'not assigned.unknown' 'niben101scf04018_592516-594815' '(at2g06255 : 116.0) ELF4-like 3 (ELF4-L3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1313 (InterPro:IPR009741); BEST Arabidopsis thaliana protein match is: ELF4-like 4 (TAIR:AT1G17455.2); Has 149 Blast hits to 148 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 148; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|70474 : 112.0) no description available & (reliability: 232.0) & (original description: Putative EFL2, Description = BnaC02g21500D protein, PFAM = PF07011)' T '35.2' 'not assigned.unknown' 'niben101scf04018_1159241-1174930' '(at4g29790 : 748.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits to 357 proteins in 124 species: Archae - 0; Bacteria - 74; Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other Eukaryotes - 190 (source: NCBI BLink). & (reliability: 1496.0) & (original description: Putative F383_14574, Description = Twist-related 1, PFAM = PF10198)' T '35.2' 'not assigned.unknown' 'niben101scf04019_754272-766712' '(at3g62900 : 254.0) CW-type Zinc Finger; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: trichome; CONTAINS InterPro DOMAIN/s: Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02990.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 508.0) & (original description: Putative At3g62900, Description = CW-type zinc-finger protein, PFAM = PF07496)' T '35.2' 'not assigned.unknown' 'niben101scf04028_145316-170774' '(at4g26240 : 222.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 444.0) & (original description: Putative BnaC07g40140D, Description = BnaC07g40140D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04028_315408-318612' '(at5g04730 : 98.2) Ankyrin-repeat containing protein; BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G04700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative , Description = , PFAM = PF12796;PF13962)' T '35.2' 'not assigned.unknown' 'niben101scf04030_135002-138972' '(at5g35160 : 954.0) Endomembrane protein 70 protein family; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT4G12650.1). & (gnl|cdd|36492 : 720.0) no description available & (gnl|cdd|66650 : 531.0) no description available & (reliability: 1908.0) & (original description: Putative TMN11, Description = Transmembrane 9 superfamily member 11, PFAM = PF02990)' T '35.2' 'not assigned.unknown' 'niben101scf04030_265663-268236' '(at3g05570 : 84.7) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G39235.1); Has 73 Blast hits to 73 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative At2g21640, Description = Putative uncharacterized protein At2g21640, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04031_276290-279685' ' no hits & (original description: Putative F7N22.10, Description = Mutator-like transposase, PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'niben101scf04033_315761-318681' ' no hits & (original description: Putative , Description = , PFAM = PF11250)' T '35.2' 'not assigned.unknown' 'niben101scf04037_105228-119278' '(at1g36980 : 217.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0220 (InterPro:IPR007919); Has 424 Blast hits to 424 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 228; Fungi - 120; Plants - 62; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 434.0) & (original description: Putative TIDP2671, Description = Transmembrane protein 50A, PFAM = PF05255)' T '35.2' 'not assigned.unknown' 'niben101scf04038_292845-296347' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04040_74899-101960' '(at4g31430 : 102.0) unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative F8F16, Description = Protein KAKU4, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04040_775956-781376' '(at5g26160 : 474.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G20610.1); Has 197 Blast hits to 158 proteins in 44 species: Archae - 0; Bacteria - 14; Metazoa - 28; Fungi - 15; Plants - 117; Viruses - 2; Other Eukaryotes - 21 (source: NCBI BLink). & (reliability: 948.0) & (original description: Putative , Description = Predicted protein, PFAM = PF10358)' T '35.2' 'not assigned.unknown' 'niben101scf04044_161341-163893' ' no hits & (original description: Putative s31, Description = Putative 30S ribosomal protein, PFAM = PF17067)' T '35.2' 'not assigned.unknown' 'niben101scf04044_171938-184004' '(at2g40070 : 228.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1); Has 108635 Blast hits to 60786 proteins in 2176 species: Archae - 287; Bacteria - 15142; Metazoa - 39415; Fungi - 26849; Plants - 4416; Viruses - 2864; Other Eukaryotes - 19662 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative At2g40070, Description = At2g40070, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04044_1457210-1459614' ' (original description: Putative ELF4, Description = Early flowering protein, PFAM = PF07011)' T '35.2' 'not assigned.unknown' 'niben101scf04044_1959710-1972652' '(at4g32620 : 603.0) Enhancer of polycomb-like transcription factor protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tudor domain (InterPro:IPR002999), Enhancer of polycomb-like (InterPro:IPR019542); BEST Arabidopsis thaliana protein match is: Enhancer of polycomb-like transcription factor protein (TAIR:AT5G04670.1); Has 578 Blast hits to 531 proteins in 105 species: Archae - 0; Bacteria - 30; Metazoa - 78; Fungi - 45; Plants - 268; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (reliability: 1206.0) & (original description: Putative , Description = Enhancer of polycomb-like protein, PFAM = PF10513)' T '35.2' 'not assigned.unknown' 'niben101scf04044_2104670-2107500' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04048_1317-3643' ' no hits & (original description: Putative orf109c, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04049_24756-29250' '(at1g47310 : 254.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 45 Blast hits to 45 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 508.0) & (original description: Putative BnaA10g28600D, Description = BnaA10g28600D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04052_116251-119923' ' no hits & (original description: Putative PGSC0003DMG401006007, Description = Putative ovule protein, PFAM = PF00538)' T '35.2' 'not assigned.unknown' 'niben101scf04052_298284-301621' ' no hits & (original description: Putative PGSC0003DMG400022768, Description = CASP-like protein, PFAM = PF04535)' T '35.2' 'not assigned.unknown' 'niben101scf04053_15226-18237' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04053_254118-261823' '(at2g14530 : 559.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 13 (TBL13); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT5G64470.2); Has 1334 Blast hits to 1311 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 1330; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 154.0) no description available & (reliability: 1118.0) & (original description: Putative TBL13, Description = Protein trichome birefringence-like 13, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf04053_280703-286108' '(at5g65810 : 360.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49720.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 720.0) & (original description: Putative At3g49720, Description = Uncharacterized protein At3g49720, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04053_345454-351250' '(at4g17000 : 224.0) unknown protein; Has 2862 Blast hits to 2331 proteins in 349 species: Archae - 6; Bacteria - 408; Metazoa - 833; Fungi - 223; Plants - 134; Viruses - 7; Other Eukaryotes - 1251 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04053_395968-398498' ' (original description: Putative PGSC0003DMG400029147, Description = Putative ovule protein, PFAM = PF00319)' T '35.2' 'not assigned.unknown' 'niben101scf04060_60811-65055' '(at5g17460 : 293.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress. & (reliability: 586.0) & (original description: Putative At5g17460, Description = Putative uncharacterized protein At5g17460, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04060_169506-172603' ' no hits & (original description: Putative TCM_045444, Description = Receptor-type tyrosine-protein phosphatase U, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04060_184103-186650' '(at5g37840 : 125.0) BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative At1g66480, Description = At2g01340, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf04063_40383-48705' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04063_58437-61299' '(at1g24480 : 320.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G24805.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 640.0) & (original description: Putative T407, Description = Putative uncharacterized protein T407, PFAM = PF08241)' T '35.2' 'not assigned.unknown' 'niben101scf04067_715522-717887' '(at1g75810 : 133.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 13 Blast hits to 13 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative At1g75810, Description = At1g75810, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04071_27891-30220' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04072_160955-163628' ' no hits & (original description: Putative PGSC0003DMG400015946, Description = Os11g0577650 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04077_762589-789746' ' (original description: Putative RT, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf04078_165521-171244' '(at4g39630 : 163.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative TCM_001216, Description = Translation initiation factor IF-2, putative isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04081_299848-303683' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04083_127736-161633' '(at5g53045 : 106.0) unknown protein; Has 122 Blast hits to 122 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 30; Plants - 41; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative , Description = , PFAM = PF09341)' T '35.2' 'not assigned.unknown' 'niben101scf04083_153943-159122' '(at5g24310 : 325.0) One of four ABI-like proteins. Involved in trichome morphogenesis, root elongation. Associates with microtubules.; ABL interactor-like protein 3 (ABIL3); BEST Arabidopsis thaliana protein match is: ABL interactor-like protein 2 (TAIR:AT3G49290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5jkn2|abil2_orysa : 160.0) Putative protein ABIL2 (Abl interactor-like protein 2) - Oryza sativa (Rice) & (reliability: 650.0) & (original description: Putative ABIL3, Description = Protein ABIL3, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04083_154012-161885' '(at5g24310 : 157.0) One of four ABI-like proteins. Involved in trichome morphogenesis, root elongation. Associates with microtubules.; ABL interactor-like protein 3 (ABIL3); BEST Arabidopsis thaliana protein match is: ABL interactor-like protein 2 (TAIR:AT3G49290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5jkn2|abil2_orysa : 115.0) Putative protein ABIL2 (Abl interactor-like protein 2) - Oryza sativa (Rice) & (reliability: 314.0) & (original description: Putative ABIL1, Description = Abl interactor-like protein 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04083_369318-377168' '(at5g24314 : 155.0) plastid transcriptionally active7 (PTAC7). & (reliability: 310.0) & (original description: Putative TAC7, Description = Protein PIGMENT DEFECTIVE 225, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04083_390758-393715' ' no hits & (original description: Putative PGSC0003DMG400018526, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04083_519966-522196' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04084_355131-357704' ' no hits & (original description: Putative glysoja_043843, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04084_425804-428562' ' no hits & (original description: Putative LTI6A, Description = Hydrophobic protein LTI6A, PFAM = PF01679)' T '35.2' 'not assigned.unknown' 'niben101scf04090_57385-60779' '(at2g37035 : 245.0) unknown protein; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 490.0) & (original description: Putative BnaC04g08200D, Description = BnaC04g08200D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04090_172679-180272' ' no hits & (original description: Putative PGSC0003DMG400019409, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04093_131509-135427' '(at2g40095 : 179.0) Alpha/beta hydrolase related protein; CONTAINS InterPro DOMAIN/s: MENTAL domain (InterPro:IPR019498); BEST Arabidopsis thaliana protein match is: Alpha/beta hydrolase related protein (TAIR:AT3G55880.2); Has 87 Blast hits to 87 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative At2g40095, Description = Alpha/beta hydrolase related protein, PFAM = PF10457)' T '35.2' 'not assigned.unknown' 'niben101scf04096_446601-454344' '(at5g52200 : 100.0) phosphoprotein phosphatase inhibitors; FUNCTIONS IN: phosphoprotein phosphatase inhibitor activity; INVOLVED IN: regulation of signal transduction, regulation of phosphoprotein phosphatase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase inhibitor 2 (IPP-2) (InterPro:IPR007062). & (reliability: 200.0) & (original description: Putative Os05g0301600, Description = Os05g0301600 protein, PFAM = PF04979)' T '35.2' 'not assigned.unknown' 'niben101scf04096_536709-540061' '(at5g52180 : 414.0) LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane protein 161AB, predicted (InterPro:IPR019395); Has 82 Blast hits to 82 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 828.0) & (original description: Putative At5g52180, Description = Dbj}, PFAM = PF10268)' T '35.2' 'not assigned.unknown' 'niben101scf04096_1175896-1181721' ' no hits & (original description: Putative IQD5, Description = BnaAnng00890D protein, PFAM = PF00612;PF13178)' T '35.2' 'not assigned.unknown' 'niben101scf04098_6120-16465' '(at5g06970 : 689.0) CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT4G11670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69201 : 428.0) no description available & (reliability: 1378.0) & (original description: Putative At5g06970, Description = AT5g06970/MOJ9_14, PFAM = PF05664)' T '35.2' 'not assigned.unknown' 'niben101scf04098_88636-91106' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf04099_41264-44421' '(at5g47740 : 100.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT2G45910.1). & (gnl|cdd|30176 : 91.9) no description available & (reliability: 200.0) & (original description: Putative PGSC0003DMG400026986, Description = U-box domain-containing protein 33, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04099_273119-275538' ' no hits & (original description: Putative , Description = Mediator of RNA polymerase II transcription subunit 13, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04099_1250069-1259610' ' no hits & (original description: Putative PGSC0003DMG400030232, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04102_399313-405716' '(at2g20760 : 161.0) Clathrin light chain protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin light chain (InterPro:IPR000996); BEST Arabidopsis thaliana protein match is: Clathrin light chain protein (TAIR:AT2G40060.1); Has 1791 Blast hits to 1279 proteins in 282 species: Archae - 0; Bacteria - 563; Metazoa - 557; Fungi - 96; Plants - 161; Viruses - 0; Other Eukaryotes - 414 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative At2g20760, Description = Clathrin light chain 1, PFAM = PF01086)' T '35.2' 'not assigned.unknown' 'niben101scf04103_334883-384098' '(at5g08720 : 892.0) CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis thaliana protein match is: Polyketide cyclase / dehydrase and lipid transport protein (TAIR:AT4G01650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1784.0) & (original description: Putative At5g08720, Description = At5g08720, PFAM = PF03364;PF03364)' T '35.2' 'not assigned.unknown' 'niben101scf04104_973552-976021' ' no hits & (original description: Putative SN1, Description = Snakin-1, PFAM = PF02704)' T '35.2' 'not assigned.unknown' 'niben101scf04107_132858-136447' '(at4g19390 : 132.0) Uncharacterised protein family (UPF0114); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0114, plant (InterPro:IPR016804), Uncharacterised protein family UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0114) (TAIR:AT5G13720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86300 : 91.0) no description available & (reliability: 264.0) & (original description: Putative PGSC0003DMG400016892, Description = Uncharacterized protein family UPF0114, PFAM = PF03350)' T '35.2' 'not assigned.unknown' 'niben101scf04107_164730-168427' '(at1g48460 : 342.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G63040.1); Has 60 Blast hits to 60 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 684.0) & (original description: Putative PGSC0003DMG400016893, Description = At1g48460, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04109_256933-260712' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04109_991912-1005934' '(at1g15060 : 696.0) Uncharacterised conserved protein UCP031088, alpha/beta hydrolase; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase, At1g15070 (InterPro:IPR016969), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase (TAIR:AT1G73750.1); Has 177 Blast hits to 156 proteins in 44 species: Archae - 2; Bacteria - 72; Metazoa - 2; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 1392.0) & (original description: Putative At1g15060, Description = At1g15070/F9L1_1, PFAM = PF00561)' T '35.2' 'not assigned.unknown' 'niben101scf04110_49968-54613' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04117_662758-665115' ' no hits & (original description: Putative PI, Description = Trypsin proteinase inhibitor, PFAM = PF02428)' T '35.2' 'not assigned.unknown' 'niben101scf04118_242262-247997' '(at3g12685 : 184.0) Acid phosphatase/vanadium-dependent haloperoxidase-related protein; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: Acid phosphatase/vanadium-dependent haloperoxidase-related protein (TAIR:AT1G24350.1); Has 1099 Blast hits to 1099 proteins in 402 species: Archae - 0; Bacteria - 719; Metazoa - 0; Fungi - 0; Plants - 229; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (gnl|cdd|32146 : 93.8) no description available & (reliability: 368.0) & (original description: Putative At3g12685, Description = Acid phosphatase/vanadium-dependent haloperoxidase-related protein, PFAM = PF02681)' T '35.2' 'not assigned.unknown' 'niben101scf04119_125683-128189' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04119_397071-405901' '(at2g02570 : 357.0) nucleic acid binding;RNA binding; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tudor subgroup (InterPro:IPR018351), Tudor domain (InterPro:IPR002999), Survival motor neuron (InterPro:IPR010304); Has 339 Blast hits to 339 proteins in 158 species: Archae - 0; Bacteria - 5; Metazoa - 136; Fungi - 89; Plants - 55; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|38236 : 195.0) no description available & (reliability: 714.0) & (original description: Putative Sb07g001010, Description = Putative uncharacterized protein Sb07g001010, PFAM = PF06003)' T '35.2' 'not assigned.unknown' 'niben101scf04120_417842-424882' '(at5g48385 : 552.0) FRIGIDA-like protein; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT4G14900.1); Has 1269 Blast hits to 1187 proteins in 101 species: Archae - 0; Bacteria - 22; Metazoa - 72; Fungi - 9; Plants - 1133; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|71337 : 329.0) no description available & (reliability: 1104.0) & (original description: Putative FRL3, Description = ABI3-interacting protein, PFAM = PF07899)' T '35.2' 'not assigned.unknown' 'niben101scf04122_75313-80456' '(at1g11380 : 248.0) PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT5G05350.1); Has 314 Blast hits to 313 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 8; Plants - 293; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 496.0) & (original description: Putative BnaA06g07050D, Description = BnaA06g07050D protein, PFAM = PF04749)' T '35.2' 'not assigned.unknown' 'niben101scf04122_253635-281981' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'niben101scf04122_752057-755559' ' no hits & (original description: Putative PGSC0003DMG400022406, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04123_284457-287430' '(at5g01910 : 99.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative BnaA03g00120D, Description = BnaA03g00120D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04124_440754-449107' ' no hits & (original description: Putative PGSC0003DMG400026019, Description = Phosphatidate cytidylyltransferase, PFAM = PF12171;PF12874)' T '35.2' 'not assigned.unknown' 'niben101scf04124_657134-659481' ' no hits & (original description: Putative , Description = GATA transcription factor 15, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04132_110404-116938' '(at1g53400 : 175.0) Ubiquitin domain-containing protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Ubiquitin domain-containing protein (TAIR:AT5G45740.1); Has 319 Blast hits to 318 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 63; Plants - 89; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|35237 : 117.0) no description available & (reliability: 350.0) & (original description: Putative ubtd2, Description = Ubiquitin domain-containing protein 2, PFAM = PF16455)' T '35.2' 'not assigned.unknown' 'niben101scf04134_252233-255448' ' no hits & (original description: Putative , Description = Polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04134_356485-359537' '(at2g27385 : 95.1) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT5G22430.1). & (reliability: 190.2) & (original description: Putative BnaA07g13160D, Description = BnaA07g13160D protein, PFAM = PF01190)' T '35.2' 'not assigned.unknown' 'niben101scf04138_48571-55958' ' no hits & (original description: Putative MTR_3g093470, Description = COP1-interacting-like protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04139_38445-58550' '(at1g29820 : 669.0) Magnesium transporter CorA-like family protein; FUNCTIONS IN: metal ion transmembrane transporter activity; INVOLVED IN: metal ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); BEST Arabidopsis thaliana protein match is: Magnesium transporter CorA-like family protein (TAIR:AT1G29830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1338.0) & (original description: Putative At1g29820, Description = Magnesium transporter CorA-like family protein, PFAM = PF01544)' T '35.2' 'not assigned.unknown' 'niben101scf04140_90648-92968' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04141_208095-212654' '(at1g72490 : 128.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17400.1); Has 75 Blast hits to 75 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 4; Plants - 58; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04143_108729-113079' '(at5g09580 : 324.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53345.1); Has 53 Blast hits to 53 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 648.0) & (original description: Putative glysoja_034559, Description = Heat shock 70 kDa protein, mitochondrial, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04148_85549-103494' '(at5g63135 : 85.9) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative At5g63135, Description = At5g63135, PFAM = PF15243)' T '35.2' 'not assigned.unknown' 'niben101scf04148_130781-135008' '(at5g47740 : 134.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT2G45910.1). & (gnl|cdd|30176 : 110.0) no description available & (reliability: 268.0) & (original description: Putative PGSC0003DMG400018183, Description = Adenine nucleotide alpha hydrolases-like superfamily protein, putative, PFAM = PF00582)' T '35.2' 'not assigned.unknown' 'niben101scf04151_29191-32636' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04156_21284-33822' '(at5g24314 : 155.0) plastid transcriptionally active7 (PTAC7). & (reliability: 310.0) & (original description: Putative PTAC7, Description = Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04156_53399-56092' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04160_14375-21030' '(at5g53110 : 254.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G46495.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 508.0) & (original description: Putative BnaA10g06460D, Description = BnaA10g06460D protein, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf04171_71148-75059' ' no hits & (original description: Putative , Description = Acyl-CoA N-acyltransferases (NAT) superfamily protein, putative isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04172_62722-68070' '(at2g20230 : 182.0) Tetraspanin family protein; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: Tetraspanin family protein (TAIR:AT4G28770.2); Has 161 Blast hits to 161 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 160; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative TOM2AH1, Description = Tetraspanin-20, PFAM = PF00335)' T '35.2' 'not assigned.unknown' 'niben101scf04172_233349-239080' '(at4g28740 : 330.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3493 (InterPro:IPR021883); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT1G02910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 660.0) & (original description: Putative PGSC0003DMG400022024, Description = OSJNBa0043L24.5 protein, PFAM = PF11998)' T '35.2' 'not assigned.unknown' 'niben101scf04175_3718-13052' ' (original description: Putative glysoja_019334, Description = KHG/KDPG aldolase, PFAM = PF01081)' T '35.2' 'not assigned.unknown' 'niben101scf04180_160044-162519' ' no hits & (original description: Putative , Description = , PFAM = PF01419)' T '35.2' 'not assigned.unknown' 'niben101scf04181_11023-17198' '(gnl|cdd|71337 : 249.0) no description available & (at5g48385 : 219.0) FRIGIDA-like protein; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT4G14900.1); Has 1269 Blast hits to 1187 proteins in 101 species: Archae - 0; Bacteria - 22; Metazoa - 72; Fungi - 9; Plants - 1133; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative RCOM_1154790, Description = Protein FRIGIDA, putative, PFAM = PF07899)' T '35.2' 'not assigned.unknown' 'niben101scf04181_84085-88756' '(at3g51010 : 132.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative PGSC0003DMG400025306, Description = At3g51010, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04182_431748-434025' ' no hits & (original description: Putative BnaC04g05990D, Description = BnaC04g05990D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04182_464803-469180' '(at2g39690 : 389.0) Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT3G12540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68359 : 170.0) no description available & (reliability: 778.0) & (original description: Putative BnaA04g22920D, Description = BnaA04g22920D protein, PFAM = PF04784;PF14389)' T '35.2' 'not assigned.unknown' 'niben101scf04183_105004-107986' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04184_231469-233684' ' (original description: Putative AAK6, Description = Adenylate kinase isoenzyme 6 homolog, PFAM = PF13238)' T '35.2' 'not assigned.unknown' 'niben101scf04184_242883-250775' '(at5g60370 : 306.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Defects-in-morphology protein 1-like, mitochondrial (InterPro:IPR019190); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39957 : 156.0) no description available & (reliability: 612.0) & (original description: Putative At5g60370, Description = Exonuclease V, chloroplastic, PFAM = PF09810;PF09810;PF09810)' T '35.2' 'not assigned.unknown' 'niben101scf04184_715331-720368' ' (original description: Putative PIPNB, Description = Phosphatidylinositol transfer protein, PFAM = PF02121)' T '35.2' 'not assigned.unknown' 'niben101scf04185_268495-271304' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04187_17232-21431' ' (original description: Putative , Description = , PFAM = PF13911)' T '35.2' 'not assigned.unknown' 'niben101scf04187_121069-126802' '(at3g30380 : 425.0) alpha/beta-Hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G01690.1); Has 4039 Blast hits to 4030 proteins in 818 species: Archae - 8; Bacteria - 1345; Metazoa - 714; Fungi - 203; Plants - 307; Viruses - 6; Other Eukaryotes - 1456 (source: NCBI BLink). & (gnl|cdd|36765 : 287.0) no description available & (reliability: 850.0) & (original description: Putative hyd, Description = Abhydrolase domain-containing protein FAM108C1, PFAM = PF12146)' T '35.2' 'not assigned.unknown' 'niben101scf04187_147040-150018' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04190_47881-63117' '(at1g32730 : 248.0) unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF702 (InterPro:IPR007818); Has 120 Blast hits to 118 proteins in 39 species: Archae - 0; Bacteria - 8; Metazoa - 63; Fungi - 4; Plants - 33; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 496.0) & (original description: Putative BnaC05g24820D, Description = BnaC05g24820D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04191_396419-411091' '(at1g10417 : 165.0) Encodes protein with unknown function whose expression is repressed by inoculation with Agrobacterium tumerifaciens.; unknown protein; Has 26006 Blast hits to 16906 proteins in 1326 species: Archae - 433; Bacteria - 3134; Metazoa - 12646; Fungi - 2033; Plants - 1219; Viruses - 58; Other Eukaryotes - 6483 (source: NCBI BLink). & (reliability: 330.0) & (original description: Putative TCM_010077, Description = Encodes protein with Uncharacterized protein function whose expression is repressed by inoculation with Agrobacterium tumerifaciens isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04193_743008-753655' '(gnl|cdd|68427 : 229.0) no description available & (at2g31160 : 213.0) LIGHT SENSITIVE HYPOCOTYLS 3 (LSH3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT1G07090.1); Has 309 Blast hits to 309 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative ELE, Description = Protein ELONGATED EMPTY GLUME, PFAM = PF04852)' T '35.2' 'not assigned.unknown' 'niben101scf04196_60402-64830' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04196_60861-64824' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04196_78268-82755' ' no hits & (original description: Putative PGSC0003DMG401019589, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04196_94530-103402' '(at1g67080 : 191.0) Encodes a protein involved in the photoprotection of PSII. An aba4-1 mutant completely lacks neoxanthin,a component of the chromophore of the peripheral antenna system in PSII. ABA4 is required for neoxanthin biosynthesis, an intermediary step in abscisic acid biosynthesis, but no catalytic activity has been detected for the ABA4 protein.; abscisic acid (ABA)-deficient 4 (ABA4); INVOLVED IN: abscisic acid biosynthetic process, regulation of superoxide anion generation, xanthophyll metabolic process, photoprotection; LOCATED IN: PSII associated light-harvesting complex II, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 723 Blast hits to 723 proteins in 64 species: Archae - 0; Bacteria - 78; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 587 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative NSY, Description = Putative neoxanthin synthase, PFAM = PF14108)' T '35.2' 'not assigned.unknown' 'niben101scf04196_120916-134002' '(at1g67080 : 196.0) Encodes a protein involved in the photoprotection of PSII. An aba4-1 mutant completely lacks neoxanthin,a component of the chromophore of the peripheral antenna system in PSII. ABA4 is required for neoxanthin biosynthesis, an intermediary step in abscisic acid biosynthesis, but no catalytic activity has been detected for the ABA4 protein.; abscisic acid (ABA)-deficient 4 (ABA4); INVOLVED IN: abscisic acid biosynthetic process, regulation of superoxide anion generation, xanthophyll metabolic process, photoprotection; LOCATED IN: PSII associated light-harvesting complex II, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 723 Blast hits to 723 proteins in 64 species: Archae - 0; Bacteria - 78; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 587 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative ABA4, Description = Protein ABA DEFICIENT 4, chloroplastic, PFAM = PF14108)' T '35.2' 'not assigned.unknown' 'niben101scf04197_57299-59997' '(gnl|cdd|68643 : 235.0) no description available & (at3g02430 : 177.0) Protein of unknown function (DUF679); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF679 (InterPro:IPR007770); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF679) (TAIR:AT4G24310.1); Has 267 Blast hits to 259 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 267; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative BnaA01g32970D, Description = BnaA01g32970D protein, PFAM = PF05078)' T '35.2' 'not assigned.unknown' 'niben101scf04197_113703-116527' ' no hits & (original description: Putative PGSC0003DMG400024916, Description = , PFAM = PF00319)' T '35.2' 'not assigned.unknown' 'niben101scf04197_116528-122556' '(at1g09810 : 286.0) evolutionarily conserved C-terminal region 11 (ECT11); CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 8 (TAIR:AT1G79270.1); Has 926 Blast hits to 916 proteins in 151 species: Archae - 0; Bacteria - 0; Metazoa - 416; Fungi - 98; Plants - 333; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (gnl|cdd|37112 : 283.0) no description available & (gnl|cdd|67749 : 143.0) no description available & (reliability: 572.0) & (original description: Putative ECT8, Description = Evolutionarily conserved C-terminal region 8, PFAM = PF04146)' T '35.2' 'not assigned.unknown' 'niben101scf04198_737876-740199' ' no hits & (original description: Putative orf108a, Description = Orf108a, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04206_45979-49109' '(at3g24740 : 261.0) Protein of unknown function (DUF1644); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1644) (TAIR:AT1G68140.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|71240 : 109.0) no description available & (reliability: 522.0) & (original description: Putative glysoja_018425, Description = Small nuclear ribonucleoprotein-associated B, PFAM = PF07800)' T '35.2' 'not assigned.unknown' 'niben101scf04206_132834-137686' '(at4g13220 : 118.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 27 Blast hits to 27 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative PGSC0003DMG400014703, Description = BnaA08g31610D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04206_197774-215579' ' no hits & (original description: Putative PGSC0003DMG400014690, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04207_83827-109141' '(at5g19660 : 1553.0) S1P appears to function as a Golgi-localized subtilase and to help protect seedlings against salt and osmotic stress. The roots of s1p-3 mutants are hypersensitive to NaCl, KCl, LiCl, and mannitol. Several salt-stress responsive genes show weaker induction in an s1P-3 mutant background. The proteolytic cleavage of the bZIP17 transcription factor depends on S1P in vitro. And there is evidence that S1P can cleave bZIP17 in vitro.; SITE-1 protease (S1P); CONTAINS InterPro DOMAIN/s: Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT1G20160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39467 : 1377.0) no description available & (gnl|cdd|84501 : 138.0) no description available & (reliability: 3106.0) & (original description: Putative s1p, Description = Membrane-bound transcription factor site-1 protease, PFAM = PF00082)' T '35.2' 'not assigned.unknown' 'niben101scf04209_55088-61048' '(at1g01360 : 284.0) Encodes RCAR1 (regulatory components of ABA receptor). Interacts with and regulates the type 2C protein phosphatases (PP2Cs) ABI1 and ABI2. Functions as abscisic acid sensor.; regulatory component of ABA receptor 1 (RCAR1); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: PYR1-like 7 (TAIR:AT4G01026.1); Has 395 Blast hits to 395 proteins in 28 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 392; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 568.0) & (original description: Putative PYL10, Description = Abscisic acid receptor PYL10, PFAM = PF10604)' T '35.2' 'not assigned.unknown' 'niben101scf04209_133253-140944' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04209_138330-160169' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04216_167652-353843' ' no hits & (original description: Putative HM01045, Description = Putative reverse transcriptase family member, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04216_349332-361104' '(at1g34320 : 813.0) Protein of unknown function (DUF668); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700), Protein of unknown function DUF3475 (InterPro:IPR021864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT5G08660.1); Has 339 Blast hits to 273 proteins in 21 species: Archae - 0; Bacteria - 1; Metazoa - 3; Fungi - 0; Plants - 335; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68572 : 122.0) no description available & (reliability: 1626.0) & (original description: Putative At1g34320, Description = At1g34320, PFAM = PF05003;PF11961)' T '35.2' 'not assigned.unknown' 'niben101scf04216_465625-469987' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04216_780392-786562' '(at1g71940 : 369.0) SNARE associated Golgi protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT4G09580.1). & (gnl|cdd|38350 : 241.0) no description available & (reliability: 738.0) & (original description: Putative pco123983, Description = Gtk16 protein, PFAM = PF09335)' T '35.2' 'not assigned.unknown' 'niben101scf04217_617453-620593' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Endonuclease exonuclease phosphatase domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04218_4657-19033' '(at1g16080 : 459.0) unknown protein; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 81 Blast hits to 81 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 918.0) & (original description: Putative BnaC05g49910D, Description = BnaC05g49910D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04219_30836-61310' '(at1g78915 : 251.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734). & (reliability: 502.0) & (original description: Putative F9K20.3, Description = F9K20.3, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04231_26804-29154' ' no hits & (original description: Putative LSU2, Description = At5g24660, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04231_62833-68535' '(at3g49590 : 303.0) Autophagy-related protein 13; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 13 (InterPro:IPR018731); BEST Arabidopsis thaliana protein match is: Autophagy-related protein 13 (TAIR:AT3G18770.1). & (gnl|cdd|39773 : 237.0) no description available & (reliability: 606.0) & (original description: Putative ATG13A, Description = Autophagy-related protein 13a, PFAM = PF10033)' T '35.2' 'not assigned.unknown' 'niben101scf04231_154061-158791' ' (original description: Putative PGSC0003DMG400027027, Description = , PFAM = PF08458;PF05703)' T '35.2' 'not assigned.unknown' 'niben101scf04231_250700-255338' '(at3g03150 : 80.9) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17165.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative LOC100282825, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04231_300511-303407' ' no hits & (original description: Putative , Description = , PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf04236_72970-75545' '(gnl|cdd|68427 : 237.0) no description available & (at2g42610 : 233.0) LIGHT SENSITIVE HYPOCOTYLS 10 (LSH10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT1G07090.1); Has 309 Blast hits to 309 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative LSH10, Description = Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10, PFAM = PF04852)' T '35.2' 'not assigned.unknown' 'niben101scf04237_7588-10862' '(at1g56020 : 191.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12970.1); Has 3011 Blast hits to 958 proteins in 192 species: Archae - 0; Bacteria - 193; Metazoa - 479; Fungi - 286; Plants - 158; Viruses - 8; Other Eukaryotes - 1887 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04237_62233-64616' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04240_423971-429808' '(gnl|cdd|70188 : 223.0) no description available & (at5g65650 : 144.0) Protein of unknown function (DUF1195); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1195 (InterPro:IPR010608); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1195) (TAIR:AT4G36660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative At1g19380, Description = Sugar transporter, putative, PFAM = PF06708)' T '35.2' 'not assigned.unknown' 'niben101scf04253_79538-82748' '(at5g50890 : 406.0) alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G05260.1); Has 209 Blast hits to 209 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 209; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 812.0) & (original description: Putative ATPHAN, Description = Protein glycosylationmyb-like TTH transcriptional regulator, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04253_150649-159221' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04253_154517-157094' ' no hits & (original description: Putative PGSC0003DMG400005532, Description = Putative ovule protein, PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben101scf04256_9770-12335' ' no hits & (original description: Putative , Description = Endonuclease/exonuclease/phosphatase family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04259_18426-21273' ' no hits & (original description: Putative FGENESH1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf04259_178840-185438' '(at3g11760 : 602.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1204.0) & (original description: Putative At5g04860, Description = Multidrug and toxic compound extrusion protein, PFAM = PF10358)' T '35.2' 'not assigned.unknown' 'niben101scf04271_801395-803649' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04276_69295-77860' '(at5g26910 : 199.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G58650.1). & (reliability: 398.0) & (original description: Putative , Description = , PFAM = PF14383;PF14309)' T '35.2' 'not assigned.unknown' 'niben101scf04276_439588-442133' ' no hits & (original description: Putative BnaA05g23040D, Description = BnaA05g23040D protein, PFAM = PF00320)' T '35.2' 'not assigned.unknown' 'niben101scf04283_162515-164540' ' no hits & (original description: Putative , Description = , PFAM = PF08137)' T '35.2' 'not assigned.unknown' 'niben101scf04283_164541-171522' '(at1g03290 : 227.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02880.2). & (reliability: 454.0) & (original description: Putative At1g03290, Description = Os10g0315400 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04283_200403-203665' '(at3g63090 : 513.0) Ubiquitin carboxyl-terminal hydrolase family protein; CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant (InterPro:IPR021099); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein (TAIR:AT2G31290.2); Has 411 Blast hits to 407 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 411; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1026.0) & (original description: Putative BnaA09g55620D, Description = BnaA09g55620D protein, PFAM = PF11955)' T '35.2' 'not assigned.unknown' 'niben101scf04283_430003-435991' '(at5g19160 : 539.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 11 (TBL11); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT3G06080.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|72785 : 135.0) no description available & (reliability: 1078.0) & (original description: Putative TBL11, Description = Protein trichome birefringence-like 11, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf04283_520256-525082' '(gnl|cdd|39909 : 284.0) no description available & (at5g46600 : 247.0) Aluminium activated malate transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to aluminum ion; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT5G46610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85194 : 148.0) no description available & (reliability: 494.0) & (original description: Putative MAIT, Description = Aluminum activated malate transporter family protein, PFAM = PF11744)' T '35.2' 'not assigned.unknown' 'niben101scf04283_727746-736081' '(at1g03180 : 278.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 556.0) & (original description: Putative BnaCnng68240D, Description = BnaCnng68240D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04283_942454-945284' '(at5g19260 : 94.7) Protein of unknown function (DUF3049); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) (TAIR:AT3G06020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative glysoja_028362, Description = Protein FANTASTIC FOUR 3, PFAM = PF11250)' T '35.2' 'not assigned.unknown' 'niben101scf04284_95349-97606' '(at4g30010 : 114.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative F6G3.40, Description = AT4g30010/F6G3_40, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04285_33792-36436' ' no hits & (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00665)' T '35.2' 'not assigned.unknown' 'niben101scf04285_440869-443291' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF05699)' T '35.2' 'not assigned.unknown' 'niben101scf04286_21610-24126' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04286_29235-34566' '(gnl|cdd|69084 : 451.0) no description available & (at1g48450 : 445.0) Protein of unknown function (DUF760); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF760 (InterPro:IPR008479); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF760) (TAIR:AT3G17800.1). & (reliability: 890.0) & (original description: Putative At3g17800, Description = UV-B-induced protein At3g17800, chloroplastic, PFAM = PF05542)' T '35.2' 'not assigned.unknown' 'niben101scf04287_381958-384707' '(at1g70420 : 116.0) Protein of unknown function (DUF1645); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT1G23710.1); Has 179 Blast hits to 179 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 162; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|71256 : 97.9) no description available & (reliability: 232.0) & (original description: Putative At1g70420, Description = At1g70420/F17O7_4, PFAM = PF07816)' T '35.2' 'not assigned.unknown' 'niben101scf04288_174555-189240' '(at4g30720 : 896.0) Encodes a putative oxidoreductase/electron carrier detected in the chloroplast stroma that is essential to ensure a correct electron flow through the photosynthetic chain and, hence, photosynthesis efficiency and normal growth. Mutations in the Col-0 allele result in pale green pigmentation and defective growth.; FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, FAD binding; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Adrenodoxin reductase (InterPro:IPR000759), FAD dependent oxidoreductase (InterPro:IPR006076), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); Has 2466 Blast hits to 2466 proteins in 951 species: Archae - 126; Bacteria - 2117; Metazoa - 0; Fungi - 2; Plants - 26; Viruses - 0; Other Eukaryotes - 195 (source: NCBI BLink). & (gnl|cdd|32579 : 302.0) no description available & (reliability: 1792.0) & (original description: Putative dadA, Description = D-amino acid dehydrogenase small subunit, PFAM = PF01494)' T '35.2' 'not assigned.unknown' 'niben101scf04290_11541-14581' ' no hits & (original description: Putative PRE4, Description = Transcription factor PRE4, PFAM = PF00010)' T '35.2' 'not assigned.unknown' 'niben101scf04292_288967-299182' '(at2g40400 : 923.0) Protein of unknown function (DUF399 and DUF3411); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF399 (InterPro:IPR007314), Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF399 and DUF3411) (TAIR:AT3G56140.1); Has 496 Blast hits to 496 proteins in 118 species: Archae - 0; Bacteria - 198; Metazoa - 0; Fungi - 0; Plants - 277; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|86570 : 225.0) no description available & (reliability: 1846.0) & (original description: Putative RER5, Description = Protein RETICULATA-RELATED 5, chloroplastic, PFAM = PF04187;PF11891)' T '35.2' 'not assigned.unknown' 'niben101scf04292_1043873-1059761' '(at1g55535 : 285.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13420.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 570.0) & (original description: Putative BnaA08g29280D, Description = BnaA08g29280D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04294_665296-668599' ' no hits & (original description: Putative MT4B, Description = Metallothionein-like protein 4B, PFAM = PF02068)' T '35.2' 'not assigned.unknown' 'niben101scf04312_390155-396848' '(at5g56850 : 99.4) unknown protein; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 198.8) & (original description: Putative At5g56850, Description = Dystrophin-1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04314_87899-102741' '(at2g25310 : 232.0) FUNCTIONS IN: carbohydrate binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate-binding-like fold (InterPro:IPR013784), Protein of unknown function DUF2012 (InterPro:IPR019008); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF2012) (TAIR:AT4G32130.1); Has 307 Blast hits to 307 proteins in 138 species: Archae - 0; Bacteria - 14; Metazoa - 141; Fungi - 68; Plants - 50; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|87975 : 165.0) no description available & (gnl|cdd|38516 : 129.0) no description available & (reliability: 464.0) & (original description: Putative At4g32130, Description = ER membrane protein complex subunit 7 homolog, PFAM = PF09430)' T '35.2' 'not assigned.unknown' 'niben101scf04316_663412-673593' '(at1g78420 : 330.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G17145.1). & (gnl|cdd|38000 : 210.0) no description available & (reliability: 660.0) & (original description: Putative GW2, Description = RING-type E3 ubiquitin ligase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04319_443886-446654' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04323_116866-129791' '(gnl|cdd|38085 : 402.0) no description available & (at5g08420 : 401.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087); Has 2263 Blast hits to 1799 proteins in 332 species: Archae - 149; Bacteria - 48; Metazoa - 634; Fungi - 309; Plants - 96; Viruses - 0; Other Eukaryotes - 1027 (source: NCBI BLink). & (gnl|cdd|31291 : 150.0) no description available & (reliability: 802.0) & (original description: Putative KRR1, Description = KRR1 small subunit processome component, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04323_408620-426182' ' (original description: Putative , Description = Reverse transcriptase, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf04325_158724-161128' ' no hits & (original description: Putative PGSC0003DMG400043768, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04325_175217-181815' ' no hits & (original description: Putative PGSC0003DMG400025196, Description = Prefoldin chaperone subunit family protein, PFAM = PF01920)' T '35.2' 'not assigned.unknown' 'niben101scf04328_17183-19404' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04329_50636-53118' '(at3g10120 : 100.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03890.1); Has 57 Blast hits to 57 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative , Description = , PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf04329_250177-259713' '(at5g03880 : 376.0) Thioredoxin family protein; FUNCTIONS IN: electron carrier activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin active site (InterPro:IPR011767), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin family protein (TAIR:AT4G10000.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|48590 : 123.0) no description available & (reliability: 752.0) & (original description: Putative gst, Description = Glutathione S-transferase, PFAM = PF13417;PF13417)' T '35.2' 'not assigned.unknown' 'niben101scf04329_393952-396830' '(at2g36220 : 120.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52710.1); Has 74 Blast hits to 74 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative At2g36220, Description = At2g36220/F2H17.17, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04329_549719-552639' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf04329_555745-558073' ' no hits & (original description: Putative At3g52660, Description = RNA recognition motif, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04329_562436-565816' '(at4g18590 : 139.0) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Replication factor A protein 3 (InterPro:IPR013970), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT3G52630.2); Has 94 Blast hits to 94 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 2; Plants - 56; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|72086 : 82.6) no description available & (reliability: 278.0) & (original description: Putative RPA3B, Description = Replication protein A 14 kDa subunit B, PFAM = PF08661)' T '35.2' 'not assigned.unknown' 'niben101scf04329_606737-610493' ' no hits & (original description: Putative PGSC0003DMG400008872, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04329_629456-632296' ' no hits & (original description: Putative , Description = , PFAM = PF08387)' T '35.2' 'not assigned.unknown' 'niben101scf04331_17368-22405' '(at4g14746 : 164.0) CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); Has 259 Blast hits to 234 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative BnaA01g19010D, Description = BnaA01g19010D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04331_677132-681353' ' no hits & (original description: Putative orf125, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04331_931990-937467' '(at5g48720 : 236.0) Encodes XRI1 (X-ray induced 1). Required for post-meiotic stages of pollen development and male and female meiosis. Maybe required for meiotic DNA repair. Inducible by X-ray. Homozygous xri1 mutants are sterile due to extensive chromosome fragmentation.; X-RAY INDUCED TRANSCRIPT 1 (XRI1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: DNA repair, female meiosis, response to X-ray, pollen development, male meiosis; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01990.1); Has 123 Blast hits to 123 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative XRI1, Description = Protein XRI1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04334_118067-120818' ' no hits & (original description: Putative , Description = , PFAM = PF02721)' T '35.2' 'not assigned.unknown' 'niben101scf04334_597639-600505' '(at2g17990 : 209.0) BEST Arabidopsis thaliana protein match is: kinectin-related (TAIR:AT5G66250.3); Has 7578 Blast hits to 6129 proteins in 783 species: Archae - 220; Bacteria - 1045; Metazoa - 3605; Fungi - 575; Plants - 442; Viruses - 38; Other Eukaryotes - 1653 (source: NCBI BLink). & (reliability: 418.0) & (original description: Putative CAP2, Description = Kinectin-related protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04339_214267-221874' '(at4g27120 : 181.0) CONTAINS InterPro DOMAIN/s: DDRGK domain (InterPro:IPR019153); Has 14775 Blast hits to 8764 proteins in 778 species: Archae - 29; Bacteria - 1878; Metazoa - 5164; Fungi - 1447; Plants - 582; Viruses - 164; Other Eukaryotes - 5511 (source: NCBI BLink). & (gnl|cdd|38264 : 178.0) no description available & (reliability: 362.0) & (original description: Putative Os07g0103200, Description = DDRGK domain-containing protein 1, PFAM = PF09756)' T '35.2' 'not assigned.unknown' 'niben101scf04339_361707-372071' '(at3g15160 : 659.0) unknown protein; Has 266 Blast hits to 264 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 0; Plants - 199; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 1318.0) & (original description: Putative BnaA03g33760D, Description = BnaA03g33760D protein, PFAM = PF14764)' T '35.2' 'not assigned.unknown' 'niben101scf04339_483837-488593' '(at1g50900 : 214.0) Ankyrin repeat family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); Has 55 Blast hits to 55 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative LTD, Description = Protein LHCP TRANSLOCATION DEFECT, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04339_491295-495268' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04339_810975-813562' '(at3g55820 : 132.0) Fasciclin-like arabinogalactan family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); Has 34 Blast hits to 34 proteins in 13 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative PGSC0003DMG400016017, Description = Fasciclin domain-containing protein, putative isoform 1, PFAM = PF02469)' T '35.2' 'not assigned.unknown' 'niben101scf04347_101093-106670' '(at3g61770 : 307.0) Acid phosphatase/vanadium-dependent haloperoxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: Acid phosphatase/vanadium-dependent haloperoxidase-related protein (TAIR:AT1G67600.1); Has 1098 Blast hits to 1098 proteins in 404 species: Archae - 0; Bacteria - 724; Metazoa - 0; Fungi - 0; Plants - 221; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink). & (gnl|cdd|32146 : 155.0) no description available & (reliability: 614.0) & (original description: Putative At3g61770, Description = Acid phosphatase/vanadium-dependent haloperoxidase-related protein, PFAM = PF02681)' T '35.2' 'not assigned.unknown' 'niben101scf04350_151386-159532' '(at1g28240 : 655.0) Protein of unknown function (DUF616); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF616 (InterPro:IPR006852); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF616) (TAIR:AT1G53040.2); Has 322 Blast hits to 322 proteins in 41 species: Archae - 14; Bacteria - 34; Metazoa - 0; Fungi - 4; Plants - 225; Viruses - 1; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|68342 : 476.0) no description available & (reliability: 1310.0) & (original description: Putative EMB2756, Description = DUF616 family protein, PFAM = PF04765)' T '35.2' 'not assigned.unknown' 'niben101scf04360_77940-85239' '(at5g13030 : 961.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0061 (InterPro:IPR003846); Has 5046 Blast hits to 4997 proteins in 1211 species: Archae - 8; Bacteria - 2327; Metazoa - 120; Fungi - 134; Plants - 48; Viruses - 0; Other Eukaryotes - 2409 (source: NCBI BLink). & (gnl|cdd|80459 : 569.0) no description available & (gnl|cdd|37753 : 441.0) no description available & (reliability: 1922.0) & (original description: Putative v1g247509, Description = Predicted protein, PFAM = PF02696)' T '35.2' 'not assigned.unknown' 'niben101scf04361_167403-170400' ' no hits & (original description: Putative ch1, Description = Histone H1, PFAM = PF00538)' T '35.2' 'not assigned.unknown' 'niben101scf04364_200494-203584' ' (original description: Putative VATG, Description = V-type proton ATPase subunit G, PFAM = PF03179)' T '35.2' 'not assigned.unknown' 'niben101scf04366_70143-74288' '(at2g23790 : 337.0) Protein of unknown function (DUF607); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF607 (InterPro:IPR006769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF607) (TAIR:AT4G36820.1); Has 364 Blast hits to 364 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 147; Fungi - 45; Plants - 131; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|38177 : 296.0) no description available & (gnl|cdd|68256 : 232.0) no description available & (reliability: 674.0) & (original description: Putative At2g23790, Description = Calcium uniporter protein 2, mitochondrial, PFAM = PF04678)' T '35.2' 'not assigned.unknown' 'niben101scf04375_174735-190232' '(at5g03900 : 476.0) Iron-sulphur cluster biosynthesis family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FeS cluster biogenesis (InterPro:IPR000361); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 952.0) & (original description: Putative At5g03900, Description = Uncharacterized protein At5g03900, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04375_337769-344247' ' (original description: Putative pol, Description = Reverse transcriptase, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf04375_639016-663996' '(at2g43180 : 509.0) Phosphoenolpyruvate carboxylase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Isocitrate lyase/phosphorylmutase (InterPro:IPR000918); BEST Arabidopsis thaliana protein match is: Phosphoenolpyruvate carboxylase family protein (TAIR:AT1G77060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|32583 : 250.0) no description available & (gnl|cdd|36474 : 237.0) no description available & (q05957|cppm_diaca : 165.0) Putative carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) (Carboxyphosphonoenolpyruvate phosphonomutase) (CPEP phosphonomutase) (PSR132) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 1018.0) & (original description: Putative bcpA, Description = Carboxyvinyl-carboxyphosphonate phosphorylmutase, PFAM = PF13714)' T '35.2' 'not assigned.unknown' 'niben101scf04375_832914-846617' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04375_865932-868939' '(at5g41980 : 297.0) CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39785 : 166.0) no description available & (reliability: 594.0) & (original description: Putative Sb04g000610, Description = Putative uncharacterized protein Sb04g000610, PFAM = PF13359)' T '35.2' 'not assigned.unknown' 'niben101scf04375_868940-893282' '(at5g08450 : 560.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR013951); Has 34444 Blast hits to 20801 proteins in 1175 species: Archae - 64; Bacteria - 2390; Metazoa - 15568; Fungi - 3729; Plants - 1886; Viruses - 208; Other Eukaryotes - 10599 (source: NCBI BLink). & (gnl|cdd|40040 : 210.0) no description available & (gnl|cdd|72067 : 95.8) no description available & (reliability: 1120.0) & (original description: Putative BnaCnng39190D, Description = BnaCnng39190D protein, PFAM = PF08642)' T '35.2' 'not assigned.unknown' 'niben101scf04379_77533-80063' '(at1g78895 : 205.0) Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT1G16825.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 410.0) & (original description: Putative RTNLB22, Description = Reticulon-like protein B22, PFAM = PF02453)' T '35.2' 'not assigned.unknown' 'niben101scf04382_351850-354113' ' no hits & (original description: Putative RTFL8, Description = DVL11, PFAM = PF08137)' T '35.2' 'not assigned.unknown' 'niben101scf04383_197762-199986' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04384_235450-239653' ' (original description: Putative ppo, Description = Polyphenol oxidase, PFAM = PF12143;PF00264;PF12142)' T '35.2' 'not assigned.unknown' 'niben101scf04385_134422-144351' ' no hits & (original description: Putative PGSC0003DMG400030795, Description = BnaC03g09460D protein, PFAM = PF00076)' T '35.2' 'not assigned.unknown' 'niben101scf04386_366061-373514' '(at5g12950 : 1144.0) FUNCTIONS IN: catalytic activity; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: stem, male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1680 (InterPro:IPR012878), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Putative glycosyl hydrolase of unknown function (DUF1680) (TAIR:AT5G12960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|71381 : 480.0) no description available & (reliability: 2288.0) & (original description: Putative BnaA03g04090D, Description = BnaA03g04090D protein, PFAM = PF07944)' T '35.2' 'not assigned.unknown' 'niben101scf04387_62283-66560' '(at3g07470 : 145.0) Protein of unknown function, DUF538; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT3G07460.1); Has 638 Blast hits to 638 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 637; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|86647 : 122.0) no description available & (reliability: 290.0) & (original description: Putative mc304, Description = AT3g07470/F21O3_18, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben101scf04387_213779-219064' '(at5g12230 : 159.0) MED19A; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19480.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative MED19A, Description = Mediator of RNA polymerase II transcription subunit 19a, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04388_38116-51310' '(at2g41770 : 1126.0) Protein of unknown function (DUF288); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF288 (InterPro:IPR005049); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF288) (TAIR:AT3G57420.1); Has 196 Blast hits to 196 proteins in 30 species: Archae - 2; Bacteria - 9; Metazoa - 51; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 2252.0) & (original description: Putative v1g246089, Description = Predicted protein, PFAM = PF03385)' T '35.2' 'not assigned.unknown' 'niben101scf04392_336237-340685' '(at5g35320 : 101.0) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04392_559068-569264' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04393_29970-36522' '(at4g29950 : 694.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G19240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36307 : 425.0) no description available & (reliability: 1388.0) & (original description: Putative At5g57210, Description = AT5g57210/MJB24_2, PFAM = PF00566;PF00566)' T '35.2' 'not assigned.unknown' 'niben101scf04395_49621-53093' ' no hits & (original description: Putative PGSC0003DMG400031772, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04395_72307-79488' '(at1g28510 : 177.0) Optic atrophy 3 protein (OPA3); CONTAINS InterPro DOMAIN/s: Optic atrophy 3-like (InterPro:IPR010754); BEST Arabidopsis thaliana protein match is: Optic atrophy 3 protein (OPA3) (TAIR:AT3G58150.1); Has 397 Blast hits to 393 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 155; Fungi - 114; Plants - 80; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|70509 : 150.0) no description available & (gnl|cdd|38545 : 140.0) no description available & (reliability: 354.0) & (original description: Putative Os01g0242300, Description = Os01g0242300 protein, PFAM = PF07047)' T '35.2' 'not assigned.unknown' 'niben101scf04395_92840-103956' '(at1g28520 : 566.0) vascular plant one zinc finger protein (VOZ1); FUNCTIONS IN: transcription activator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: vascular plant one zinc finger protein 2 (TAIR:AT2G42400.1); Has 77 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1132.0) & (original description: Putative VOZ2, Description = Transcription factor VOZ2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04396_273663-277447' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04396_298215-300562' '(at1g49170 : 122.0) Protein of unknown function (DUF167); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF167 (InterPro:IPR003746); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF167) (TAIR:AT5G63440.3); Has 579 Blast hits to 579 proteins in 252 species: Archae - 16; Bacteria - 317; Metazoa - 105; Fungi - 25; Plants - 60; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|38486 : 92.4) no description available & (reliability: 244.0) & (original description: Putative At1g49170, Description = At1g49170, PFAM = PF02594)' T '35.2' 'not assigned.unknown' 'niben101scf04396_402821-405339' ' no hits & (original description: Putative PGSC0003DMG400042000, Description = MADS-box protein AGL75, PFAM = PF00319)' T '35.2' 'not assigned.unknown' 'niben101scf04398_96427-113902' '(at1g32160 : 409.0) Protein of unknown function (DUF760); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF760 (InterPro:IPR008479); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF760) (TAIR:AT1G48450.1); Has 138 Blast hits to 138 proteins in 25 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|69084 : 398.0) no description available & (reliability: 818.0) & (original description: Putative Sb06g027240, Description = Putative uncharacterized protein Sb06g027240, PFAM = PF05542)' T '35.2' 'not assigned.unknown' 'niben101scf04398_267599-273091' '(at1g32120 : 402.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557), Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G51538.1); Has 16736 Blast hits to 9656 proteins in 576 species: Archae - 4; Bacteria - 1182; Metazoa - 7098; Fungi - 2631; Plants - 1178; Viruses - 174; Other Eukaryotes - 4469 (source: NCBI BLink). & (gnl|cdd|68394 : 153.0) no description available & (reliability: 804.0) & (original description: Putative BnaC05g28990D, Description = BnaC05g28990D protein, PFAM = PF04819)' T '35.2' 'not assigned.unknown' 'niben101scf04400_173337-175864' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04400_316029-321203' '(at1g26470 : 95.1) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, H4/H2A histone acetyltransferase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CT20 (InterPro:IPR012423); Has 60 Blast hits to 60 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 2; Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative At1g26470, Description = Chromatin modification-related protein Eaf7, PFAM = PF07904)' T '35.2' 'not assigned.unknown' 'niben101scf04400_390667-395350' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04400_454306-457773' '(at1g69260 : 103.0) ABI five binding protein (AFP1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1675 (InterPro:IPR012463); BEST Arabidopsis thaliana protein match is: ABI five binding protein 2 (TAIR:AT1G13740.1); Has 267 Blast hits to 267 proteins in 42 species: Archae - 0; Bacteria - 6; Metazoa - 29; Fungi - 9; Plants - 184; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|71335 : 86.0) no description available & (reliability: 206.0) & (original description: Putative AFP2, Description = Ninja-family protein AFP2, PFAM = PF07897;PF16136)' T '35.2' 'not assigned.unknown' 'niben101scf04401_521577-527443' ' no hits & (original description: Putative OXS3, Description = Oxidative stress 3, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04403_360962-375210' '(at1g69210 : 263.0) Uncharacterised protein family UPF0090; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0090 (InterPro:IPR003728); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family UPF0090 (TAIR:AT1G77122.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative PGSC0003DMG400028364, Description = DUF150 family protein, PFAM = PF02576)' T '35.2' 'not assigned.unknown' 'niben101scf04406_434339-438845' '(at5g52200 : 93.6) phosphoprotein phosphatase inhibitors; FUNCTIONS IN: phosphoprotein phosphatase inhibitor activity; INVOLVED IN: regulation of signal transduction, regulation of phosphoprotein phosphatase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase inhibitor 2 (IPP-2) (InterPro:IPR007062). & (reliability: 187.2) & (original description: Putative Os05g0301600, Description = Os05g0301600 protein, PFAM = PF04979)' T '35.2' 'not assigned.unknown' 'niben101scf04406_467274-469678' ' no hits & (original description: Putative FIL1, Description = Stamen-specific protein FIL1, PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'niben101scf04406_575805-583293' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04406_655909-659234' '(at2g33510 : 86.7) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28070.1). & (reliability: 173.4) & (original description: Putative At2g33510, Description = Humj1, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04406_760629-766845' '(at5g13190 : 182.0) CONTAINS InterPro DOMAIN/s: LPS-induced tumor necrosis factor alpha factor (InterPro:IPR006629); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative At5g13190, Description = GSH-induced LITAF domain protein, PFAM = PF10601)' T '35.2' 'not assigned.unknown' 'niben101scf04407_71192-75453' '(at5g62550 : 135.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; Has 14949 Blast hits to 9947 proteins in 971 species: Archae - 43; Bacteria - 3248; Metazoa - 4424; Fungi - 1542; Plants - 562; Viruses - 55; Other Eukaryotes - 5075 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative TCM_013867, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04407_119421-122201' ' no hits & (original description: Putative , Description = , PFAM = PF00011)' T '35.2' 'not assigned.unknown' 'niben101scf04407_228164-231008' '(gnl|cdd|70036 : 178.0) no description available & (at1g74730 : 135.0) Protein of unknown function (DUF1118); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1118 (InterPro:IPR009500); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1118) (TAIR:AT5G08050.1); Has 78 Blast hits to 78 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative BnaC06g35550D, Description = BnaC06g35550D protein, PFAM = PF06549)' T '35.2' 'not assigned.unknown' 'niben101scf04410_406082-409192' ' no hits & (original description: Putative PGSC0003DMG400004064, Description = Subtilisin inhibitor CLSI-I, PFAM = PF00280)' T '35.2' 'not assigned.unknown' 'niben101scf04410_766535-775186' '(at3g26850 : 137.0) histone-lysine N-methyltransferases; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chromosome; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SRI, Set2 Rpb1 interacting (InterPro:IPR013257); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT3G18640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative Sb10g008980, Description = Putative uncharacterized protein Sb10g008980, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04411_152232-155284' '(at5g04010 : 117.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03920.1); Has 37 Blast hits to 37 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative , Description = , PFAM = PF00646)' T '35.2' 'not assigned.unknown' 'niben101scf04416_105409-107846' ' no hits & (original description: Putative , Description = , PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf04418_571447-576337' '(at3g05675 : 499.0) BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10800.1); Has 259 Blast hits to 259 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 998.0) & (original description: Putative At3g05675, Description = BTB/POZ domain-containing protein At3g05675, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04419_209500-217939' '(at5g65250 : 165.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 330.0) & (original description: Putative At5g65250, Description = Putative uncharacterized protein At5g65250, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04420_258796-262620' ' no hits & (original description: Putative cht1, Description = Chitinase 1, PFAM = PF00704)' T '35.2' 'not assigned.unknown' 'niben101scf04422_169385-176257' '(at5g06610 : 423.0) Protein of unknown function (DUF620); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF620 (InterPro:IPR006873); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF620) (TAIR:AT1G27690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68363 : 337.0) no description available & (reliability: 846.0) & (original description: Putative OSJNBa0091P11.2, Description = Putative uncharacterized protein OSJNBa0091P11.2, PFAM = PF04788)' T '35.2' 'not assigned.unknown' 'niben101scf04422_285622-298679' '(at5g06620 : 358.0) SET domain protein 38 (SDG38); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: ASH1-related protein 2 (TAIR:AT2G19640.2); Has 1397 Blast hits to 1391 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 497; Fungi - 314; Plants - 290; Viruses - 3; Other Eukaryotes - 293 (source: NCBI BLink). & (reliability: 716.0) & (original description: Putative ATXR4, Description = Histone-lysine N-methyltransferase ATXR4, PFAM = PF00856)' T '35.2' 'not assigned.unknown' 'niben101scf04422_1747750-1755203' '(at3g03890 : 407.0) FMN binding; FUNCTIONS IN: FMN binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2470 (InterPro:IPR019595), FMN-binding split barrel (InterPro:IPR012349), Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain (InterPro:IPR011576), FMN-binding split barrel, related (InterPro:IPR009002), Haem iron utilisation protein, pyridoxamine 5'-phosphate domain-containing (InterPro:IPR014599); BEST Arabidopsis thaliana protein match is: Pyridoxamine 5'-phosphate oxidase family protein (TAIR:AT3G21140.1); Has 770 Blast hits to 770 proteins in 270 species: Archae - 0; Bacteria - 458; Metazoa - 13; Fungi - 0; Plants - 151; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (reliability: 814.0) & (original description: Putative At3g03890, Description = AT3G03890 protein, PFAM = PF13883;PF10615)' T '35.2' 'not assigned.unknown' 'niben101scf04424_467824-470567' ' no hits & (original description: Putative PGSC0003DMG400016538, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04424_617590-625425' '(at1g80000 : 182.0) CASC3/Barentsz eIF4AIII binding; CONTAINS InterPro DOMAIN/s: CASC3/Barentsz eIF4AIII binding (InterPro:IPR018545); BEST Arabidopsis thaliana protein match is: CASC3/Barentsz eIF4AIII binding (TAIR:AT1G15280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative Os01g0595100, Description = Glycine-rich family protein, PFAM = PF09405)' T '35.2' 'not assigned.unknown' 'niben101scf04430_436013-438462' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04431_346709-349776' '(at3g52060 : 362.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G22070.1); Has 568 Blast hits to 568 proteins in 19 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 545; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|86287 : 315.0) no description available & (reliability: 724.0) & (original description: Putative AT4G32290, Description = Core-2/I-branching enzyme, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben101scf04434_165911-169508' '(gnl|cdd|68624 : 249.0) no description available & (at5g01120 : 191.0) Protein of unknown function (DUF674); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF674 (InterPro:IPR007750); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF674) (TAIR:AT5G43240.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative PGSC0003DMG400020360, Description = , PFAM = PF05056)' T '35.2' 'not assigned.unknown' 'niben101scf04435_111920-114431' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04436_337036-339950' '(at3g07350 : 210.0) Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT3G25240.1); Has 393 Blast hits to 390 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 391; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68298 : 200.0) no description available & (reliability: 420.0) & (original description: Putative TCM_002725, Description = Sulfate/thiosulfate import ATP-binding protein cysA, putative, PFAM = PF04720)' T '35.2' 'not assigned.unknown' 'niben101scf04436_455177-459918' '(at3g07310 : 316.0) Protein of unknown function (DUF760); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF760 (InterPro:IPR008479); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF760) (TAIR:AT5G48590.1); Has 147 Blast hits to 143 proteins in 27 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|69084 : 307.0) no description available & (reliability: 632.0) & (original description: Putative F383_25220, Description = Phosphoserine aminotransferase, PFAM = PF05542)' T '35.2' 'not assigned.unknown' 'niben101scf04436_1138086-1141542' ' no hits & (original description: Putative TCM_002676, Description = Lactoylglutathione lyase / glyoxalase I family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04436_1317001-1319489' '(at3g07480 : 204.0) 2Fe-2S ferredoxin-like superfamily protein; FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); Has 1263 Blast hits to 1263 proteins in 213 species: Archae - 0; Bacteria - 293; Metazoa - 132; Fungi - 8; Plants - 41; Viruses - 0; Other Eukaryotes - 789 (source: NCBI BLink). & (gnl|cdd|38519 : 115.0) no description available & (reliability: 408.0) & (original description: Putative F21O3.19, Description = 2Fe-2S ferredoxin-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04436_1329039-1333904' '(at5g48385 : 576.0) FRIGIDA-like protein; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT4G14900.1); Has 1269 Blast hits to 1187 proteins in 101 species: Archae - 0; Bacteria - 22; Metazoa - 72; Fungi - 9; Plants - 1133; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|71337 : 333.0) no description available & (reliability: 1152.0) & (original description: Putative FRL3, Description = ABI3-interacting protein, PFAM = PF07899)' T '35.2' 'not assigned.unknown' 'niben101scf04436_1357577-1362794' '(at5g12230 : 146.0) MED19A; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19480.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative MED19A, Description = Mediator of RNA polymerase II transcription subunit 19a, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04441_27279-36515' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04444_514417-523723' '(at5g55660 : 178.0) DEK domain-containing chromatin associated protein; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: DEK domain-containing chromatin associated protein (TAIR:AT4G26630.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37477 : 122.0) no description available & (reliability: 356.0) & (original description: Putative PGSC0003DMG400022282, Description = Protein DEK, PFAM = PF08766)' T '35.2' 'not assigned.unknown' 'niben101scf04444_893133-899026' '(at5g55960 : 795.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0118 (InterPro:IPR002549); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37576 : 472.0) no description available & (reliability: 1590.0) & (original description: Putative BnaA10g10060D, Description = BnaA10g10060D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04445_282663-284941' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04451_90687-93079' ' no hits & (original description: Putative orf131b, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04452_99547-116312' '(at5g48020 : 581.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|33294 : 86.1) no description available & (reliability: 1162.0) & (original description: Putative At5g48020, Description = At5g48020, PFAM = PF14226)' T '35.2' 'not assigned.unknown' 'niben101scf04455_15923-21416' ' no hits & (original description: Putative PGSC0003DMG400030842, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04457_66781-69722' '(at4g16850 : 85.1) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G31130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative PGSC0003DMG400027446, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04457_211972-214880' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04457_274599-426044' ' no hits & (original description: Putative PGSC0003DMG400040884, Description = , PFAM = PF14541)' T '35.2' 'not assigned.unknown' 'niben101scf04457_452231-454918' ' no hits & (original description: Putative PGSC0003DMG400027447, Description = , PFAM = PF14541)' T '35.2' 'not assigned.unknown' 'niben101scf04457_490060-499363' '(at4g28025 : 123.0) unknown protein. & (reliability: 246.0) & (original description: Putative TCM_038590, Description = Uncharacterized protein isoform 1, PFAM = PF00504)' T '35.2' 'not assigned.unknown' 'niben101scf04462_121635-125825' '(at3g15351 : 167.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 43 Blast hits to 43 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative At3g15351, Description = AT3G15351 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04462_198471-201511' '(at3g60520 : 96.3) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02070.1); Has 107 Blast hits to 107 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative TCM_005618, Description = Late cornified envelope protein 1E, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04464_316422-319108' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf04473_1195-6440' '(at3g05625 : 350.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 330 Blast hits to 328 proteins in 146 species: Archae - 14; Bacteria - 241; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 700.0) & (original description: Putative At3g05625, Description = At3g05625, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04473_87047-99968' ' no hits & (original description: Putative , Description = , PFAM = PF00035)' T '35.2' 'not assigned.unknown' 'niben101scf04473_95747-100007' ' no hits & (original description: Putative , Description = , PFAM = PF00035)' T '35.2' 'not assigned.unknown' 'niben101scf04473_219191-221736' ' no hits & (original description: Putative glysoja_007451, Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04473_405417-412262' '(at1g56420 : 141.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12530.1); Has 58 Blast hits to 58 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative BnaC05g39620D, Description = BnaC05g39620D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04473_1507739-1548671' '(at1g27385 : 220.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454); Has 79 Blast hits to 79 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|67952 : 81.1) no description available & (reliability: 440.0) & (original description: Putative Os02g0507400, Description = Os02g0507400 protein, PFAM = PF04359)' T '35.2' 'not assigned.unknown' 'niben101scf04477_107598-116049' '(at1g50710 : 509.0) unknown protein; Has 109 Blast hits to 109 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 61; Fungi - 8; Plants - 36; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 1018.0) & (original description: Putative 38200, Description = AUGMIN subunit 4, PFAM = PF14735)' T '35.2' 'not assigned.unknown' 'niben101scf04477_372511-442047' '(at1g50730 : 697.0) unknown protein; Has 218 Blast hits to 209 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 141; Fungi - 2; Plants - 33; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|38886 : 576.0) no description available & (reliability: 1394.0) & (original description: Putative BnaC06g04080D, Description = BnaC06g04080D protein, PFAM = PF03635)' T '35.2' 'not assigned.unknown' 'niben101scf04477_381083-397528' '(at1g50730 : 207.0) unknown protein; Has 218 Blast hits to 209 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 141; Fungi - 2; Plants - 33; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (gnl|cdd|38886 : 151.0) no description available & (reliability: 414.0) & (original description: Putative At1g50730, Description = Esophageal cancer associated protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04481_107973-113618' '(at2g02370 : 349.0) SNARE associated Golgi protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT1G12450.1); Has 2420 Blast hits to 2420 proteins in 703 species: Archae - 6; Bacteria - 1288; Metazoa - 120; Fungi - 130; Plants - 226; Viruses - 0; Other Eukaryotes - 650 (source: NCBI BLink). & (gnl|cdd|87885 : 94.4) no description available & (reliability: 698.0) & (original description: Putative At2g02370, Description = At2g02370/T16F16.16, PFAM = PF09335)' T '35.2' 'not assigned.unknown' 'niben101scf04485_105051-119945' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04494_33888-54759' '(at1g45688 : 188.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative Os06g0163300, Description = Os06g0163300 protein, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'niben101scf04495_82060-90133' '(at3g30380 : 455.0) alpha/beta-Hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G01690.1); Has 4039 Blast hits to 4030 proteins in 818 species: Archae - 8; Bacteria - 1345; Metazoa - 714; Fungi - 203; Plants - 307; Viruses - 6; Other Eukaryotes - 1456 (source: NCBI BLink). & (gnl|cdd|36765 : 331.0) no description available & (reliability: 910.0) & (original description: Putative hyd, Description = Abhydrolase domain-containing protein FAM108C1, PFAM = PF12146)' T '35.2' 'not assigned.unknown' 'niben101scf04500_137888-141034' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04500_157094-159414' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04500_310272-318477' '(at2g21960 : 425.0) unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in 59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 850.0) & (original description: Putative Sb06g030240, Description = Putative uncharacterized protein Sb06g030240, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04503_380849-383275' ' no hits & (original description: Putative F16B3.11, Description = AT3g02480/F16B3_11, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04504_83027-90751' '(at4g27390 : 205.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 410.0) & (original description: Putative MTR_2g080290, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04504_182621-184976' ' no hits & (original description: Putative PGSC0003DMG400000246, Description = , PFAM = PF14214)' T '35.2' 'not assigned.unknown' 'niben101scf04504_259795-264193' ' no hits & (original description: Putative PGSC0003DMG401019249, Description = Putative uncharacterized protein P0406F06.35, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04506_360315-362982' ' no hits & (original description: Putative , Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04509_168432-170850' ' (original description: Putative GASA11, Description = Gibberellin-regulated protein 11, PFAM = PF02704)' T '35.2' 'not assigned.unknown' 'niben101scf04509_290448-292879' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04526_45443-47757' ' no hits & (original description: Putative orf105, Description = Orf105, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04526_278608-281050' ' no hits & (original description: Putative LE25, Description = Seed maturation protein, PFAM = PF03760)' T '35.2' 'not assigned.unknown' 'niben101scf04528_483041-487217' '(at3g14850 : 339.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 41 (TBL41); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 38 (TAIR:AT1G29050.1); Has 1339 Blast hits to 1315 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1337; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 180.0) no description available & (reliability: 678.0) & (original description: Putative gal2, Description = Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein, PFAM = PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf04528_935422-937697' ' no hits & (original description: Putative PGSC0003DMG400018400, Description = Wound-responsive family protein, PFAM = PF12609)' T '35.2' 'not assigned.unknown' 'niben101scf04528_1415457-1418476' '(at3g20680 : 268.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1995 (InterPro:IPR018962); Has 37 Blast hits to 37 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87898 : 100.0) no description available & (reliability: 536.0) & (original description: Putative MTR_2g082660, Description = Plant/F3H11-7 protein, PFAM = PF09353)' T '35.2' 'not assigned.unknown' 'niben101scf04529_36678-38836' ' no hits & (original description: Putative psbI, Description = Photosystem II reaction center protein I, PFAM = PF02532)' T '35.2' 'not assigned.unknown' 'niben101scf04529_37165-39347' ' (original description: Putative psbK, Description = Photosystem II reaction center protein K, PFAM = PF02533)' T '35.2' 'not assigned.unknown' 'niben101scf04535_236534-238992' ' no hits & (original description: Putative PGSC0003DMG400013474, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04539_125066-142771' '(at2g25950 : 347.0) CONTAINS InterPro DOMAIN/s: Proteasome-interacting thioredoxin-like domain, C-terminal (InterPro:IPR010400); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1000) (TAIR:AT3G04780.1); Has 551 Blast hits to 551 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 233; Fungi - 139; Plants - 82; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|36941 : 230.0) no description available & (gnl|cdd|87041 : 146.0) no description available & (reliability: 694.0) & (original description: Putative , Description = Duf1000-domain-containing protein, PFAM = PF06201)' T '35.2' 'not assigned.unknown' 'niben101scf04539_217329-221014' ' no hits & (original description: Putative , Description = Iron import ATP-binding/permease IrtA, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04547_450180-452920' '(at5g06990 : 283.0) Protein of unknown function, DUF617; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF617, plant (InterPro:IPR006460); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF617 (TAIR:AT2G21990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68336 : 238.0) no description available & (reliability: 566.0) & (original description: Putative MIZ1, Description = BnaA06g33470D protein, PFAM = PF04759)' T '35.2' 'not assigned.unknown' 'niben101scf04549_33400-414747' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf04549_974623-982437' '(at1g07970 : 673.0) CONTAINS InterPro DOMAIN/s: Cytochrome B561-related, N-terminal (InterPro:IPR019176); Has 215 Blast hits to 213 proteins in 79 species: Archae - 0; Bacteria - 6; Metazoa - 131; Fungi - 22; Plants - 42; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (gnl|cdd|39869 : 355.0) no description available & (reliability: 1346.0) & (original description: Putative At1g07970, Description = Putative uncharacterized protein At1g07970, PFAM = PF09786)' T '35.2' 'not assigned.unknown' 'niben101scf04549_1089170-1091500' ' no hits & (original description: Putative pdxT, Description = Pyridoxal 5'-phosphate synthase glutaminase subunit, PFAM = PF01174)' T '35.2' 'not assigned.unknown' 'niben101scf04551_74428-76975' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04551_265932-268114' ' no hits & (original description: Putative BnaA08g14340D, Description = BnaA08g14340D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04551_309037-312449' ' no hits & (original description: Putative PGSC0003DMG400022295, Description = , PFAM = PF14368)' T '35.2' 'not assigned.unknown' 'niben101scf04551_418408-425520' '(at3g26750 : 351.0) CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme E2C-binding protein (InterPro:IPR019193); Has 26 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 702.0) & (original description: Putative F383_09422, Description = Isoleucine--trna ligase, PFAM = PF09814)' T '35.2' 'not assigned.unknown' 'niben101scf04553_7361-9477' ' no hits & (original description: Putative At4g00530, Description = F6N23.20 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04554_60888-81000' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04555_18646-27325' '(at5g60720 : 453.0) Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT2G39690.1); Has 703 Blast hits to 670 proteins in 103 species: Archae - 4; Bacteria - 66; Metazoa - 40; Fungi - 4; Plants - 482; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (gnl|cdd|68359 : 162.0) no description available & (reliability: 906.0) & (original description: Putative BnaA10g13550D, Description = BnaA10g13550D protein, PFAM = PF14389;PF04784)' T '35.2' 'not assigned.unknown' 'niben101scf04556_93161-95394' ' no hits & (original description: Putative PGSC0003DMG400028984, Description = BnaA05g11040D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04560_322131-328154' '(at1g08125 : 367.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G73320.1). & (gnl|cdd|38004 : 83.1) no description available & (reliability: 734.0) & (original description: Putative At1g08125, Description = S-adenosyl-L-methionine-dependent methyltransferases superfamily protein, PFAM = PF10294)' T '35.2' 'not assigned.unknown' 'niben101scf04562_102456-104968' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf04562_382412-385214' ' no hits & (original description: Putative At2g06320, Description = Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04570_214736-219574' '(at5g38060 : 155.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative F383_13371, Description = Carboxypeptidase 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04570_218779-221194' ' no hits & (original description: Putative PGSC0003DMG400010395, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04570_239086-244360' ' no hits & (original description: Putative si606014d11, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04574_744069-746782' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04574_744147-746833' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04574_856362-858945' '(at5g65520 : 123.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 246.0) & (original description: Putative BnaA09g52440D, Description = BnaA09g52440D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04582_378383-381350' ' no hits & (original description: Putative , Description = Zinc finger containing preotein, putative, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben101scf04594_318859-327070' '(at1g25420 : 301.0) Regulator of Vps4 activity in the MVB pathway protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061); BEST Arabidopsis thaliana protein match is: Regulator of Vps4 activity in the MVB pathway protein (TAIR:AT1G34220.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37238 : 229.0) no description available & (gnl|cdd|67036 : 153.0) no description available & (reliability: 602.0) & (original description: Putative BnaCnng24500D, Description = BnaCnng24500D protein, PFAM = PF03398)' T '35.2' 'not assigned.unknown' 'niben101scf04598_27988-34157' '(at1g10280 : 473.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT3G21310.1); Has 584 Blast hits to 584 proteins in 19 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 556; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|86287 : 439.0) no description available & (reliability: 946.0) & (original description: Putative At1g10280, Description = At1g10280, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben101scf04598_113157-235528' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf04600_26054-28437' ' (original description: Putative Os05g0477900, Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'niben101scf04607_42701-48322' '(at5g67550 : 348.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71110.1); Has 161 Blast hits to 154 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 696.0) & (original description: Putative BnaA09g07310D, Description = BnaA09g07310D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04607_771981-778633' '(at4g37680 : 615.0) heptahelical transmembrane protein HHP4; heptahelical protein 4 (HHP4); FUNCTIONS IN: receptor activity; INVOLVED IN: response to hormone stimulus, response to sucrose stimulus; LOCATED IN: integral to membrane; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Hly-III related (InterPro:IPR004254); BEST Arabidopsis thaliana protein match is: heptahelical protein 5 (TAIR:AT4G38320.1). & (gnl|cdd|35967 : 213.0) no description available & (gnl|cdd|86213 : 121.0) no description available & (reliability: 1230.0) & (original description: Putative HHP4, Description = Heptahelical transmembrane protein 4, PFAM = PF03006)' T '35.2' 'not assigned.unknown' 'niben101scf04608_501994-508464' '(at5g04830 : 231.0) Nuclear transport factor 2 (NTF2) family protein; Has 83 Blast hits to 83 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 4; Fungi - 37; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative At5g04830, Description = Nuclear transport factor 2 (NTF2) family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04610_130651-133634' ' no hits & (original description: Putative PGSC0003DMG401005139, Description = , PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf04610_133635-135216' ' no hits & (original description: Putative PGSC0003DMG401005139, Description = , PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf04610_600013-604367' '(at5g42765 : 210.0) INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 420.0) & (original description: Putative PGSC0003DMG400003731, Description = Chloroplast thylakoid membrane, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04610_696858-704123' '(at1g47330 : 520.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein with a domain of unknown function (DUF21) (TAIR:AT2G14520.1); Has 11150 Blast hits to 10836 proteins in 2494 species: Archae - 102; Bacteria - 8237; Metazoa - 428; Fungi - 268; Plants - 237; Viruses - 0; Other Eukaryotes - 1878 (source: NCBI BLink). & (gnl|cdd|37329 : 351.0) no description available & (gnl|cdd|31445 : 168.0) no description available & (reliability: 1040.0) & (original description: Putative CBSDUF7, Description = DUF21 domain-containing protein At1g47330, PFAM = PF00571;PF01595)' T '35.2' 'not assigned.unknown' 'niben101scf04612_98298-101492' ' (original description: Putative PGSC0003DMG400025987, Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'niben101scf04614_9129-11379' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04621_111807-122219' '(at5g04460 : 652.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Ring/U-Box superfamily protein (TAIR:AT2G27950.1). & (reliability: 1304.0) & (original description: Putative BnaA07g13460D, Description = BnaA07g13460D protein, PFAM = PF13920)' T '35.2' 'not assigned.unknown' 'niben101scf04624_5414-8319' '(at2g27770 : 308.0) Plant protein of unknown function (DUF868); LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT3G04860.1); Has 288 Blast hits to 288 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 288; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69434 : 257.0) no description available & (reliability: 616.0) & (original description: Putative BnaA09g51660D, Description = BnaA09g51660D protein, PFAM = PF05910)' T '35.2' 'not assigned.unknown' 'niben101scf04627_237940-245911' '(at1g64960 : 951.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-type fold (InterPro:IPR016024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37160 : 597.0) no description available & (reliability: 1902.0) & (original description: Putative NCAPG2, Description = Condensin-2 complex subunit G2, PFAM = PF12422)' T '35.2' 'not assigned.unknown' 'niben101scf04629_211469-215862' '(at1g35180 : 301.0) TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT1G35170.1); Has 191 Blast hits to 191 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 59; Fungi - 8; Plants - 76; Viruses - 3; Other Eukaryotes - 45 (source: NCBI BLink). & (gnl|cdd|39675 : 125.0) no description available & (gnl|cdd|47992 : 94.6) no description available & (reliability: 602.0) & (original description: Putative SST, Description = Putative uncharacterized protein SST, PFAM = PF03798)' T '35.2' 'not assigned.unknown' 'niben101scf04632_190478-193350' '(at3g52710 : 96.3) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36220.1); Has 64 Blast hits to 64 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 192.6) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04632_411819-420761' '(at3g52570 : 372.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: intracellular protein transport, GPI anchor metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: PGAP1-like (InterPro:IPR012908); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G10030.1); Has 2648 Blast hits to 2646 proteins in 970 species: Archae - 27; Bacteria - 1772; Metazoa - 182; Fungi - 164; Plants - 106; Viruses - 0; Other Eukaryotes - 397 (source: NCBI BLink). & (gnl|cdd|37593 : 191.0) no description available & (reliability: 744.0) & (original description: Putative Sb03g040680, Description = Putative uncharacterized protein Sb03g040680, PFAM = PF12697)' T '35.2' 'not assigned.unknown' 'niben101scf04632_924352-941669' '(at3g03773 : 172.0) HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT4G02450.2); Has 706 Blast hits to 706 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 339; Fungi - 125; Plants - 130; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|38368 : 88.9) no description available & (reliability: 344.0) & (original description: Putative At3g03773, Description = p23 co-chaperone protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04634_82295-86111' ' (original description: Putative ERF4, Description = ERF4 protein, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'niben101scf04639_1-2955' ' no hits & (original description: Putative nrt2, Description = Nitrate transporter, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04639_1116241-1222483' '(at5g60370 : 365.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Defects-in-morphology protein 1-like, mitochondrial (InterPro:IPR019190); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38557 : 232.0) no description available & (gnl|cdd|32119 : 140.0) no description available & (reliability: 730.0) & (original description: Putative ak6, Description = AK6, PFAM = PF09810;PF09810;PF09810;PF13238)' T '35.2' 'not assigned.unknown' 'niben101scf04640_315916-378961' '(at4g18690 : 151.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18680.1); Has 522 Blast hits to 522 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 513; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative PGSC0003DMG400028441, Description = Delay of germination 1, putative, PFAM = PF14144)' T '35.2' 'not assigned.unknown' 'niben101scf04640_316470-318677' '(at4g18690 : 166.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18680.1); Has 522 Blast hits to 522 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 513; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative DOG1, Description = Delay of germination 1, PFAM = PF14144)' T '35.2' 'not assigned.unknown' 'niben101scf04643_136912-143684' '(at2g36885 : 216.0) unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative At2g36885, Description = Expressed protein, PFAM = PF13301)' T '35.2' 'not assigned.unknown' 'niben101scf04650_569345-572079' ' no hits & (original description: Putative PGSC0003DMG400017375, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04653_68847-71173' ' (original description: Putative TER1, Description = Putative polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04653_119942-135310' ' no hits & (original description: Putative PGSC0003DMG400031024, Description = B3 DNA binding domain-containing protein, PFAM = PF02362)' T '35.2' 'not assigned.unknown' 'niben101scf04653_119966-124800' ' no hits & (original description: Putative PGSC0003DMG400031024, Description = B3 domain-containing protein Os02g0598200 family, PFAM = PF02362)' T '35.2' 'not assigned.unknown' 'niben101scf04654_50552-59293' '(at1g74860 : 106.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19010.1); Has 210 Blast hits to 193 proteins in 61 species: Archae - 0; Bacteria - 9; Metazoa - 75; Fungi - 18; Plants - 58; Viruses - 1; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative At1g74860, Description = At1g74860, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04654_59627-64284' ' no hits & (original description: Putative BnaC03g57280D, Description = BnaA06g17060D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04657_165693-169582' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04657_290431-296279' '(gnl|cdd|69589 : 301.0) no description available & (at3g19610 : 135.0) Plant protein of unknown function (DUF936); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF936, plant (InterPro:IPR010341); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF936) (TAIR:AT1G08760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative At3g19610, Description = BnaA03g35340D protein, PFAM = PF06075)' T '35.2' 'not assigned.unknown' 'niben101scf04662_9184-15851' '(at1g65020 : 379.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NERD (InterPro:IPR011528); Has 69 Blast hits to 69 proteins in 27 species: Archae - 0; Bacteria - 18; Metazoa - 8; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 758.0) & (original description: Putative At1g65020, Description = At1g65020, PFAM = PF08378)' T '35.2' 'not assigned.unknown' 'niben101scf04663_6164-8887' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04663_457067-461017' '(at5g25540 : 98.6) Expressed protein contains PAM2 PABC interacting domain.; CTC-interacting domain 6 (CID6); CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 5 (TAIR:AT5G11440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 197.2) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04664_12461-14751' ' no hits & (original description: Putative At2g21290, Description = 30S ribosomal protein S31, mitochondrial, PFAM = PF17067)' T '35.2' 'not assigned.unknown' 'niben101scf04664_129017-131559' ' no hits & (original description: Putative PGSC0003DMG400031147, Description = , PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'niben101scf04664_198678-203838' '(at2g16460 : 294.0) Protein of unknown function (DUF1640); FUNCTIONS IN: metal ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1640 (InterPro:IPR012439); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1640) (TAIR:AT3G51090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38366 : 207.0) no description available & (gnl|cdd|71238 : 201.0) no description available & (reliability: 588.0) & (original description: Putative At2g16460, Description = Expressed protein, PFAM = PF07798)' T '35.2' 'not assigned.unknown' 'niben101scf04664_477463-485268' '(at2g21385 : 404.0) unknown protein. & (reliability: 808.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04664_485232-487825' ' no hits & (original description: Putative , Description = Putative histone-lysine N-methyltransferase SETD1B-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04669_330269-338489' '(at3g58600 : 256.0) Adaptin ear-binding coat-associated protein 1 NECAP-1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: endocytosis; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adaptin ear-binding coat-associated protein 1 NECAP-1 (InterPro:IPR012466); BEST Arabidopsis thaliana protein match is: non-intrinsic ABC protein 4 (TAIR:AT1G03900.1); Has 463 Blast hits to 463 proteins in 142 species: Archae - 0; Bacteria - 2; Metazoa - 232; Fungi - 69; Plants - 94; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|37711 : 223.0) no description available & (gnl|cdd|87402 : 192.0) no description available & (reliability: 512.0) & (original description: Putative NECP2, Description = Os01g0614700 protein, PFAM = PF07933)' T '35.2' 'not assigned.unknown' 'niben101scf04669_343912-348330' '(at2g31130 : 91.7) unknown protein; Has 116 Blast hits to 113 proteins in 44 species: Archae - 0; Bacteria - 3; Metazoa - 21; Fungi - 2; Plants - 40; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 183.4) & (original description: Putative PGSC0003DMG400020429, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04671_448734-452116' '(at5g22090 : 138.0) Protein of unknown function (DUF3049); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) (TAIR:AT4G02810.1). & (reliability: 276.0) & (original description: Putative glysoja_032408, Description = Protein FAF-like, chloroplastic, PFAM = PF11250)' T '35.2' 'not assigned.unknown' 'niben101scf04674_366888-369287' '(at5g18850 : 89.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 178.0) & (original description: Putative BnaA03g07400D, Description = BnaA03g07400D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04675_389690-395370' '(at5g11730 : 523.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G25970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86287 : 450.0) no description available & (reliability: 1046.0) & (original description: Putative Sb01g009220, Description = Putative uncharacterized protein Sb01g009220, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben101scf04675_399479-406622' '(at1g55340 : 120.0) Protein of unknown function (DUF1639); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1639 (InterPro:IPR012438); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1639) (TAIR:AT3G03880.1); Has 250 Blast hits to 247 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 250; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative Os05g0556500, Description = Os05g0556500 protein, PFAM = PF07797)' T '35.2' 'not assigned.unknown' 'niben101scf04675_628448-630957' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04675_929848-937917' '(at3g20430 : 128.0) CONTAINS InterPro DOMAIN/s: Phosphorylated adapter RNA export protein, RNA-binding domain (InterPro:IPR019385); Has 110 Blast hits to 110 proteins in 51 species: Archae - 0; Bacteria - 3; Metazoa - 56; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|39151 : 95.6) no description available & (reliability: 256.0) & (original description: Putative F383_04167, Description = Iron import ATP-binding/permease IrtA, PFAM = PF10258)' T '35.2' 'not assigned.unknown' 'niben101scf04675_933107-938531' ' no hits & (original description: Putative , Description = Iron import ATP-binding/permease IrtA, PFAM = PF10258)' T '35.2' 'not assigned.unknown' 'niben101scf04675_976810-988002' '(at4g32960 : 330.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32970.1); Has 106 Blast hits to 106 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 660.0) & (original description: Putative BnaC07g44040D, Description = BnaC07g44040D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04679_118397-129193' '(at4g32140 : 481.0) EamA-like transporter family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: EamA-like transporter family (TAIR:AT3G07080.1); Has 1581 Blast hits to 1581 proteins in 473 species: Archae - 40; Bacteria - 583; Metazoa - 277; Fungi - 235; Plants - 87; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink). & (gnl|cdd|37976 : 362.0) no description available & (reliability: 962.0) & (original description: Putative Sb06g030570, Description = Putative uncharacterized protein Sb06g030570, PFAM = PF00892)' T '35.2' 'not assigned.unknown' 'niben101scf04684_103442-117020' '(at4g27510 : 208.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 416.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04684_255303-258094' ' no hits & (original description: Putative PGSC0003DMG400035247, Description = , PFAM = PF00319)' T '35.2' 'not assigned.unknown' 'niben101scf04684_353957-383173' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04686_298386-300703' ' no hits & (original description: Putative PGSC0003DMG400036538, Description = Os03g0782400 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04686_305881-310966' ' no hits & (original description: Putative PGSC0003DMG400023578, Description = F14J16.29, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04686_306103-308246' ' no hits & (original description: Putative PGSC0003DMG400036538, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04686_331704-343407' '(at4g31400 : 293.0) Encodes CTF7, a homolog of the yeast CTF protein required for the formation of sister chromatid cohesion. Arabidopsis CTF7 is similar to Saccharomyces cerevisiae CTF7 in that it lacks an N-terminal extension, exhibits acetyltransferase activity, and can complement a yeast ctf7 temperature-sensitive mutation. Arabidopsis CTF7 is critical for female gametophyte and embryo development, but not for the establishment of mitotic cohesion during microgametogenesis or during endosperm development.; CTF7; FUNCTIONS IN: damaged DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: sister chromatid cohesion, embryo sac development, embryo development; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: DNA-repair protein, UmuC-like (InterPro:IPR001126); Has 328 Blast hits to 327 proteins in 141 species: Archae - 0; Bacteria - 2; Metazoa - 149; Fungi - 104; Plants - 43; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|38224 : 170.0) no description available & (reliability: 586.0) & (original description: Putative CTF7, Description = Protein CHROMOSOME TRANSMISSION FIDELITY 7, PFAM = PF13880;PF13878)' T '35.2' 'not assigned.unknown' 'niben101scf04688_289933-295165' '(at2g27590 : 471.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Has 109 Blast hits to 109 proteins in 24 species: Archae - 0; Bacteria - 26; Metazoa - 0; Fungi - 2; Plants - 33; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 942.0) & (original description: Putative At2g27590, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04697_26843-55448' '(at4g38120 : 791.0) ARM repeat superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39735 : 215.0) no description available & (reliability: 1582.0) & (original description: Putative At4g38120, Description = ARM repeat superfamily protein, PFAM = PF13251)' T '35.2' 'not assigned.unknown' 'niben101scf04697_289718-291924' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04697_316817-319020' ' no hits & (original description: Putative TCM_036826, Description = Methionyl-tRNA synthetase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04699_201430-203031' ' no hits & (original description: Putative orf129a, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04699_202246-205136' ' (original description: Putative dpo, Description = DNA polymerase, PFAM = PF03175;PF03175)' T '35.2' 'not assigned.unknown' 'niben101scf04700_559462-570277' '(at1g58520 : 719.0) RXW8; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G59406.1); Has 3216 Blast hits to 3174 proteins in 135 species: Archae - 0; Bacteria - 157; Metazoa - 0; Fungi - 2; Plants - 3048; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|36349 : 455.0) no description available & (gnl|cdd|66403 : 331.0) no description available & (reliability: 1438.0) & (original description: Putative HYP1, Description = ERD (Early-responsive to dehydration stress) family protein, PFAM = PF14703;PF02714;PF13967)' T '35.2' 'not assigned.unknown' 'niben101scf04700_917238-919684' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04702_478553-861688' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04703_793150-800955' ' no hits & (original description: Putative , Description = DNA/RNA polymerases superfamily protein, PFAM = PF03732;PF08284)' T '35.2' 'not assigned.unknown' 'niben101scf04703_845380-848713' '(at2g45260 : 642.0) Plant protein of unknown function (DUF641); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF641) (TAIR:AT4G34080.1); Has 407 Blast hits to 396 proteins in 44 species: Archae - 0; Bacteria - 10; Metazoa - 42; Fungi - 9; Plants - 286; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|68434 : 166.0) no description available & (reliability: 1284.0) & (original description: Putative At2g45260, Description = Putative uncharacterized protein At2g45260, PFAM = PF04859)' T '35.2' 'not assigned.unknown' 'niben101scf04703_1178356-1180277' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04708_110380-122747' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04711_36531-46674' '(at1g20410 : 517.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity, RNA binding; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103); Has 545 Blast hits to 513 proteins in 206 species: Archae - 168; Bacteria - 1; Metazoa - 125; Fungi - 4; Plants - 38; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink). & (gnl|cdd|37575 : 233.0) no description available & (gnl|cdd|31450 : 207.0) no description available & (reliability: 1034.0) & (original description: Putative PUS10, Description = Putative tRNA pseudouridine synthase Pus10, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04712_73812-86297' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04713_455310-457684' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04713_725202-728056' ' (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04714_56714-59417' ' no hits & (original description: Putative PGSC0003DMG400026013, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04714_165950-168141' ' (original description: Putative Os04g0357300, Description = Putative ovule protein, PFAM = PF05970)' T '35.2' 'not assigned.unknown' 'niben101scf04714_166846-169724' ' no hits & (original description: Putative Os10g0192300, Description = Os10g0192300 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04723_34037-36999' ' no hits & (original description: Putative BKI1, Description = BRI1 kinase inhibitor 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04724_32138-37112' '(at1g53560 : 122.0) Ribosomal protein L18ae family; BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT1G17080.1); Has 133 Blast hits to 133 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 127; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative RPL18aA, Description = 60S ribosomal protein L18aA, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04724_49636-52898' ' no hits & (original description: Putative , Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04724_78390-83847' ' no hits & (original description: Putative PGSC0003DMG403008565, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04724_153554-155757' '(at1g52855 : 85.9) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15534.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 171.8) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04724_360217-362543' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04724_720861-725045' '(at1g52910 : 176.0) Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT3G15480.1); Has 528 Blast hits to 528 proteins in 99 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 528; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70227 : 111.0) no description available & (reliability: 352.0) & (original description: Putative 1G01, Description = Fiber protein Fb34, PFAM = PF06749)' T '35.2' 'not assigned.unknown' 'niben101scf04727_226136-228492' '(at5g39600 : 178.0) CONTAINS InterPro DOMAIN/s: Ribosomal protein L53, mitochondrial (InterPro:IPR019716); Has 50 Blast hits to 50 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative mRPL53, Description = Mitochondrial 39S ribosomal protein L53, PFAM = PF10780)' T '35.2' 'not assigned.unknown' 'niben101scf04730_111487-124594' '(at5g06560 : 394.0) Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT3G11850.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68159 : 112.0) no description available & (reliability: 788.0) & (original description: Putative MYOB7, Description = Myosin-binding protein 7, PFAM = PF04576)' T '35.2' 'not assigned.unknown' 'niben101scf04730_125196-152215' '(at3g54750 : 338.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages. & (reliability: 676.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04731_125394-131010' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04731_961072-982449' '(at5g09840 : 543.0) Putative endonuclease or glycosyl hydrolase; BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT5G64710.1); Has 416 Blast hits to 392 proteins in 63 species: Archae - 2; Bacteria - 5; Metazoa - 78; Fungi - 41; Plants - 277; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|86646 : 169.0) no description available & (reliability: 1086.0) & (original description: Putative EDA32, Description = Endonuclease or glycosyl hydrolase, putative, PFAM = PF01936;PF12872;PF12872)' T '35.2' 'not assigned.unknown' 'niben101scf04731_1246283-1252193' ' (original description: Putative CBP, Description = Citrate-binding protein, PFAM = PF08787)' T '35.2' 'not assigned.unknown' 'niben101scf04731_1249177-1251965' ' (original description: Putative CBP, Description = Citrate-binding protein, PFAM = PF08787)' T '35.2' 'not assigned.unknown' 'niben101scf04732_102948-125709' '(at5g12170 : 437.0) Encodes one of the CRT-Like transporters (CLT1/AT5G19380, CLT2/AT4G24460, CLT3/AT5G12170). Required for glutathione homeostasis and stress responses. Mutants lacking these transporters are heavy metal-sensitive, glutathione(GSH)-deficient, and hypersensitive to Phytophthora infection.; CRT (chloroquine-resistance transporter)-like transporter 3 (CLT3); BEST Arabidopsis thaliana protein match is: CRT (chloroquine-resistance transporter)-like transporter 1 (TAIR:AT5G19380.1); Has 215 Blast hits to 213 proteins in 59 species: Archae - 0; Bacteria - 14; Metazoa - 5; Fungi - 2; Plants - 81; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (reliability: 874.0) & (original description: Putative CLT3, Description = Protein CLT3, chloroplastic, PFAM = PF08627)' T '35.2' 'not assigned.unknown' 'niben101scf04736_55579-57938' ' (original description: Putative rx, Description = Disease resistance protein RGH5, PFAM = PF00931)' T '35.2' 'not assigned.unknown' 'niben101scf04738_379673-384399' '(at5g55490 : 458.0) Encodes a transmembrane domain containing protein that is expressed in pollen germ cells.; gamete expressed protein 1 (GEX1); Has 7985 Blast hits to 6093 proteins in 809 species: Archae - 118; Bacteria - 1642; Metazoa - 3258; Fungi - 589; Plants - 254; Viruses - 18; Other Eukaryotes - 2106 (source: NCBI BLink). & (reliability: 916.0) & (original description: Putative GEX1, Description = Protein GAMETE EXPRESSED 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04738_615182-626625' '(at3g10650 : 219.0) BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast hits to 31782 proteins in 2093 species: Archae - 202; Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants - 1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative PGSC0003DMG400023499, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04738_615218-625770' '(at3g10650 : 226.0) BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast hits to 31782 proteins in 2093 species: Archae - 202; Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants - 1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative PGSC0003DMG400023499, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04738_659918-662636' ' no hits & (original description: Putative PGSC0003DMG400001986, Description = CASP-like protein, PFAM = PF04535)' T '35.2' 'not assigned.unknown' 'niben101scf04740_143297-145704' ' no hits & (original description: Putative PGSC0003DMG400011434, Description = BnaA05g02670D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04741_204309-208082' '(at1g17030 : 665.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G47010.2); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 1330.0) & (original description: Putative BnaC05g13140D, Description = BnaC05g13140D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04745_741321-755375' '(at3g15150 : 229.0) Encodes a SUMO E3 ligase that regulates endocycle onset and meristem maintenance.; HIGH PLOIDY2 (HPY2); Has 268 Blast hits to 268 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 53; Plants - 46; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|35704 : 101.0) no description available & (reliability: 458.0) & (original description: Putative MMS21, Description = E3 SUMO-protein ligase MMS21, PFAM = PF11789;PF00046)' T '35.2' 'not assigned.unknown' 'niben101scf04745_742523-755049' '(at3g15150 : 236.0) Encodes a SUMO E3 ligase that regulates endocycle onset and meristem maintenance.; HIGH PLOIDY2 (HPY2); Has 268 Blast hits to 268 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 53; Plants - 46; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative MMS21, Description = E3 SUMO-protein ligase MMS21, PFAM = PF11789)' T '35.2' 'not assigned.unknown' 'niben101scf04748_668-5559' '(at1g16810 : 101.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1754, eukaryotic (InterPro:IPR013865); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|71982 : 90.9) no description available & (reliability: 202.0) & (original description: Putative At1g16810, Description = At1g16810/F17F16.8, PFAM = PF08555)' T '35.2' 'not assigned.unknown' 'niben101scf04748_153498-155677' ' no hits & (original description: Putative PGSC0003DMG400026314, Description = Putative B3 domain-containing protein REM17-like, PFAM = PF02362)' T '35.2' 'not assigned.unknown' 'niben101scf04752_97486-122182' '(at5g19660 : 1547.0) S1P appears to function as a Golgi-localized subtilase and to help protect seedlings against salt and osmotic stress. The roots of s1p-3 mutants are hypersensitive to NaCl, KCl, LiCl, and mannitol. Several salt-stress responsive genes show weaker induction in an s1P-3 mutant background. The proteolytic cleavage of the bZIP17 transcription factor depends on S1P in vitro. And there is evidence that S1P can cleave bZIP17 in vitro.; SITE-1 protease (S1P); CONTAINS InterPro DOMAIN/s: Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT1G20160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39467 : 1376.0) no description available & (gnl|cdd|84501 : 139.0) no description available & (reliability: 3094.0) & (original description: Putative s1p, Description = Membrane-bound transcription factor site-1 protease, PFAM = PF00082)' T '35.2' 'not assigned.unknown' 'niben101scf04753_338652-341158' '(at1g02816 : 167.0) Protein of unknown function, DUF538; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT4G02370.1); Has 559 Blast hits to 558 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 558; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|86647 : 130.0) no description available & (reliability: 334.0) & (original description: Putative BnaC08g45960D, Description = BnaC08g45960D protein, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben101scf04763_176318-184279' '(at3g29185 : 501.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF3598 (InterPro:IPR022017); Has 54 Blast hits to 54 proteins in 23 species: Archae - 0; Bacteria - 24; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1002.0) & (original description: Putative Os03g0758900, Description = Os03g0758900 protein, PFAM = PF12204)' T '35.2' 'not assigned.unknown' 'niben101scf04764_763436-771110' '(at5g25590 : 540.0) INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52320.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68357 : 271.0) no description available & (reliability: 1080.0) & (original description: Putative BnaC07g29160D, Description = BnaC07g29160D protein, PFAM = PF04782;PF04783)' T '35.2' 'not assigned.unknown' 'niben101scf04764_1008618-1099178' '(at2g25730 : 2914.0) unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages. & (gnl|cdd|37022 : 1098.0) no description available & (reliability: 5828.0) & (original description: Putative , Description = Zinc finger FYVE domain-containing protein 26 isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04765_116190-125996' '(at4g21720 : 127.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, sepal, male gametophyte, root, flower; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage. & (reliability: 254.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04773_63610-69455' ' no hits & (original description: Putative Os03g0703300, Description = Putative dentin sialophosphoprotein-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04781_60965-63462' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04783_780106-799918' '(at5g19050 : 474.0) alpha/beta-Hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1749 (InterPro:IPR013744); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|40037 : 384.0) no description available & (gnl|cdd|71966 : 201.0) no description available & (reliability: 948.0) & (original description: Putative TSPGSL018_5810, Description = Alpha beta-hydrolases superfamily protein isoform 1, PFAM = PF08538)' T '35.2' 'not assigned.unknown' 'niben101scf04784_305106-309761' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04784_309762-311679' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04793_41243-46665' '(at5g06700 : 602.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). A tbr mutant is impaired in its ability to deposit secondary wall cellulose in specific cell types, most notably in trichomes.; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: plant-type cell wall modification, pectin biosynthetic process, cellulose biosynthetic process, secondary cell wall biogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT3G12060.1); Has 18773 Blast hits to 6666 proteins in 584 species: Archae - 22; Bacteria - 3086; Metazoa - 4181; Fungi - 2776; Plants - 1414; Viruses - 506; Other Eukaryotes - 6788 (source: NCBI BLink). & (gnl|cdd|72785 : 180.0) no description available & (reliability: 1204.0) & (original description: Putative TBR, Description = Protein trichome birefringence, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf04795_77436-105126' '(at5g50840 : 261.0) CONTAINS InterPro DOMAIN/s: Taxilin (InterPro:IPR019132); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37061 : 84.0) no description available & (reliability: 522.0) & (original description: Putative BnaC03g16380D, Description = BnaC03g16380D protein, PFAM = PF09728)' T '35.2' 'not assigned.unknown' 'niben101scf04796_1209-7416' '(at4g17240 : 151.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages. & (reliability: 302.0) & (original description: Putative dl4655c, Description = Putative uncharacterized protein AT4g17240, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04796_49224-51766' '(at4g16410 : 157.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF751 (InterPro:IPR008470); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative PrxQ, Description = Peroxiredoxin Q, chloroplastic, PFAM = PF05421)' T '35.2' 'not assigned.unknown' 'niben101scf04796_70409-72735' '(at3g09950 : 90.9) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04797_141550-144539' '(at3g01360 : 239.0) Family of unknown function (DUF716) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF716) (TAIR:AT1G55230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68394 : 172.0) no description available & (reliability: 478.0) & (original description: Putative PGSC0003DMG400001293, Description = At3g01360, PFAM = PF04819)' T '35.2' 'not assigned.unknown' 'niben101scf04800_314165-319605' ' no hits & (original description: Putative PGSC0003DMG400041916, Description = Putative ovule protein, PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben101scf04800_318792-325450' ' (original description: Putative Tdv1, Description = CACTA transposable element, PFAM = PF13952;PF13960;PF02992)' T '35.2' 'not assigned.unknown' 'niben101scf04800_322161-325708' ' (original description: Putative , Description = OSJNBa0081G05.10 protein, PFAM = PF02992;PF02992)' T '35.2' 'not assigned.unknown' 'niben101scf04801_197225-200771' ' no hits & (original description: Putative PGSC0003DMG400024598, Description = Transcription factor bHLH36, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04801_239608-242036' ' (original description: Putative PGSC0003DMG400024595, Description = Zinc finger, RING/FYVE/PHD-type, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf04804_136540-138217' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04813_121628-124285' ' no hits & (original description: Putative , Description = Homeobox-leucine zipper protein HOX9, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04815_95595-98077' ' no hits & (original description: Putative , Description = RT, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04819_443042-445926' '(at2g47360 : 136.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02570.1); Has 58 Blast hits to 55 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative PGSC0003DMG400007284, Description = BnaA03g21750D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04820_292594-298858' '(at3g15550 : 514.0) unknown protein; Has 25732 Blast hits to 16979 proteins in 961 species: Archae - 144; Bacteria - 1801; Metazoa - 12681; Fungi - 1868; Plants - 912; Viruses - 94; Other Eukaryotes - 8232 (source: NCBI BLink). & (reliability: 1028.0) & (original description: Putative BnaA05g23960D, Description = BnaA05g23960D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04820_330329-336569' '(at1g80310 : 490.0) sulfate transmembrane transporters; FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547); BEST Arabidopsis thaliana protein match is: molybdate transporter 1 (TAIR:AT2G25680.1); Has 846 Blast hits to 836 proteins in 367 species: Archae - 24; Bacteria - 581; Metazoa - 20; Fungi - 62; Plants - 71; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 980.0) & (original description: Putative MOT1, Description = Molybdate transporter 1, PFAM = PF16983;PF16983)' T '35.2' 'not assigned.unknown' 'niben101scf04820_407070-412443' '(at1g52780 : 1039.0) Protein of unknown function (DUF2921); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: cultured cell, callus, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2921 (InterPro:IPR021319); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF2921) (TAIR:AT4G21700.1); Has 114 Blast hits to 99 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 2078.0) & (original description: Putative Sb03g004080, Description = Putative uncharacterized protein Sb03g004080, PFAM = PF11145)' T '35.2' 'not assigned.unknown' 'niben101scf04827_179198-182938' ' no hits & (original description: Putative PGSC0003DMG400002795, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04827_279249-281575' ' no hits & (original description: Putative PGSC0003DMG402002794, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04827_395927-409711' '(at1g09280 : 507.0) CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits to 5912 proteins in 1592 species: Archae - 0; Bacteria - 2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses - 0; Other Eukaryotes - 2186 (source: NCBI BLink). & (gnl|cdd|80545 : 221.0) no description available & (reliability: 1014.0) & (original description: Putative AM587_10012363, Description = Thiosulfate sulfurtransferase/rhodanese domain-containing protein 2, PFAM = PF12368)' T '35.2' 'not assigned.unknown' 'niben101scf04827_395954-411648' '(at1g09280 : 798.0) CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits to 5912 proteins in 1592 species: Archae - 0; Bacteria - 2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses - 0; Other Eukaryotes - 2186 (source: NCBI BLink). & (gnl|cdd|80545 : 221.0) no description available & (gnl|cdd|37762 : 188.0) no description available & (reliability: 1596.0) & (original description: Putative glysoja_012023, Description = Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2, PFAM = PF03959;PF12368)' T '35.2' 'not assigned.unknown' 'niben101scf04827_445880-448638' ' no hits & (original description: Putative BnaC04g53850D, Description = BnaC04g53850D protein, PFAM = PF12507)' T '35.2' 'not assigned.unknown' 'niben101scf04829_261660-266307' ' no hits & (original description: Putative SPEAR1, Description = Protein SPEAR1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04832_78801-81394' '(at5g45320 : 141.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G26350.1); Has 253 Blast hits to 253 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 253; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 83.8) no description available & (reliability: 282.0) & (original description: Putative BnaAnng05510D, Description = BnaAnng05510D protein, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'niben101scf04841_71124-73567' '(at2g01300 : 126.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15010.1); Has 73 Blast hits to 73 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative BnaA02g27000D, Description = BnaA02g27000D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04845_19433-22536' '(at2g01410 : 359.0) NHL domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT2G16760.1); Has 137 Blast hits to 137 proteins in 39 species: Archae - 0; Bacteria - 57; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 718.0) & (original description: Putative PGSC0003DMG400030500, Description = NHL domain protein, PFAM = PF08450)' T '35.2' 'not assigned.unknown' 'niben101scf04847_127209-130030' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04860_458896-504518' '(at3g12590 : 1361.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 50 Blast hits to 41 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 2722.0) & (original description: Putative BnaC01g38520D, Description = BnaC01g38520D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04869_669078-671440' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04871_1134220-1137590' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04871_1254061-1258122' '(at5g64130 : 132.0) cAMP-regulated phosphoprotein 19-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: cAMP-regulated phosphoprotein/endosulphine conserved region (InterPro:IPR006760); BEST Arabidopsis thaliana protein match is: cAMP-regulated phosphoprotein 19-related protein (TAIR:AT1G69510.2); Has 149 Blast hits to 149 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|71283 : 97.5) no description available & (reliability: 264.0) & (original description: Putative TCM_007505, Description = CAMP-regulated phosphoprotein 19-related protein isoform 1, PFAM = PF04667)' T '35.2' 'not assigned.unknown' 'niben101scf04871_1288748-1295520' '(at1g01500 : 359.0) Erythronate-4-phosphate dehydrogenase family protein; BEST Arabidopsis thaliana protein match is: Erythronate-4-phosphate dehydrogenase family protein (TAIR:AT1G19400.2); Has 143 Blast hits to 143 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 718.0) & (original description: Putative At1g01500, Description = Uncharacterized protein At1g01500, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04872_115736-121605' ' (original description: Putative csd, Description = Putative cysteine desulfurase, PFAM = PF00266)' T '35.2' 'not assigned.unknown' 'niben101scf04872_147584-153311' ' (original description: Putative csd, Description = Putative cysteine desulfurase, PFAM = PF00266)' T '35.2' 'not assigned.unknown' 'niben101scf04876_257745-260146' '(at1g52720 : 93.2) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15630.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative F6D8.3, Description = At1g52720, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04886_125223-129211' ' no hits & (original description: Putative , Description = ATP synthase subunit epsilon, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04886_659824-662417' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04894_33719-47892' '(at3g22270 : 640.0) Topoisomerase II-associated protein PAT1; BEST Arabidopsis thaliana protein match is: Topoisomerase II-associated protein PAT1 (TAIR:AT4G14990.1); Has 263 Blast hits to 260 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 98; Fungi - 15; Plants - 121; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (reliability: 1280.0) & (original description: Putative At4g14990, Description = Putative uncharacterized protein At4g14990, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04899_438829-442960' '(at4g32480 : 221.0) Protein of unknown function (DUF506) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT2G20670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68298 : 211.0) no description available & (reliability: 442.0) & (original description: Putative At2g20670, Description = Expressed protein, PFAM = PF04720)' T '35.2' 'not assigned.unknown' 'niben101scf04899_471908-475670' '(at2g20670 : 239.0) Protein of unknown function (DUF506) ; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT4G32480.1); Has 375 Blast hits to 373 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 373; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68298 : 214.0) no description available & (reliability: 478.0) & (original description: Putative At2g20670, Description = Expressed protein, PFAM = PF04720)' T '35.2' 'not assigned.unknown' 'niben101scf04901_12462-18140' '(at5g20680 : 577.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 16; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 14 (TAIR:AT5G64020.1); Has 1636 Blast hits to 1561 proteins in 93 species: Archae - 0; Bacteria - 11; Metazoa - 58; Fungi - 27; Plants - 1333; Viruses - 7; Other Eukaryotes - 200 (source: NCBI BLink). & (gnl|cdd|72785 : 124.0) no description available & (reliability: 1154.0) & (original description: Putative TBL16, Description = Protein trichome birefringence-like 16, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf04905_33011-45195' ' no hits & (original description: Putative , Description = , PFAM = PF03754)' T '35.2' 'not assigned.unknown' 'niben101scf04905_900928-903092' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04907_449351-452400' ' no hits & (original description: Putative VAG1, Description = V-type proton ATPase subunit G, PFAM = PF03179)' T '35.2' 'not assigned.unknown' 'niben101scf04910_142617-147953' ' no hits & (original description: Putative , Description = , PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben101scf04910_146814-149372' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04911_39792-44142' ' no hits & (original description: Putative Sb01g010320, Description = Putative uncharacterized protein Sb01g010320, PFAM = PF10497)' T '35.2' 'not assigned.unknown' 'niben101scf04914_90658-92745' '(at1g29680 : 338.0) Protein of unknown function (DUF1264); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1264 (InterPro:IPR010686); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1264) (TAIR:AT5G45690.1); Has 286 Blast hits to 286 proteins in 122 species: Archae - 0; Bacteria - 120; Metazoa - 0; Fungi - 64; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|70357 : 307.0) no description available & (reliability: 676.0) & (original description: Putative F383_05903, Description = Histone acetyltransferase, PFAM = PF06884)' T '35.2' 'not assigned.unknown' 'niben101scf04914_91246-93703' '(gnl|cdd|70357 : 178.0) no description available & (at1g29680 : 152.0) Protein of unknown function (DUF1264); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1264 (InterPro:IPR010686); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1264) (TAIR:AT5G45690.1); Has 286 Blast hits to 286 proteins in 122 species: Archae - 0; Bacteria - 120; Metazoa - 0; Fungi - 64; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative OBAP1A, Description = Embryo-specific protein, PFAM = PF06884)' T '35.2' 'not assigned.unknown' 'niben101scf04914_93062-96821' '(at5g45690 : 326.0) Protein of unknown function (DUF1264); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: seed, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1264 (InterPro:IPR010686); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1264) (TAIR:AT4G18920.1); Has 288 Blast hits to 288 proteins in 123 species: Archae - 0; Bacteria - 122; Metazoa - 0; Fungi - 64; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|70357 : 304.0) no description available & (reliability: 652.0) & (original description: Putative F383_05903, Description = Histone acetyltransferase, PFAM = PF06884)' T '35.2' 'not assigned.unknown' 'niben101scf04915_104720-109184' ' no hits & (original description: Putative PGSC0003DMG400027948, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04918_788404-790928' ' no hits & (original description: Putative PGSC0003DMG401030716, Description = Putative egg cell-secreted protein 1.2-like, PFAM = PF05617)' T '35.2' 'not assigned.unknown' 'niben101scf04918_817577-820182' '(at2g11890 : 204.0) adenylate cyclase; adenylate cyclases; FUNCTIONS IN: adenylate cyclase activity; INVOLVED IN: cAMP biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate cyclase (InterPro:IPR008172); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative TTM3, Description = Triphosphate tunel metalloenzyme 3, PFAM = PF01928)' T '35.2' 'not assigned.unknown' 'niben101scf04918_821785-827035' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04918_836885-839378' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04920_178886-181305' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf04921_245389-254945' '(at3g11760 : 737.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1474.0) & (original description: Putative At5g04860, Description = Multidrug and toxic compound extrusion protein, PFAM = PF10358)' T '35.2' 'not assigned.unknown' 'niben101scf04926_60563-64209' ' no hits & (original description: Putative GCL1, Description = Polyadenylate-binding protein 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04926_396606-401312' '(at5g51110 : 222.0) Transcriptional coactivator/pterin dehydratase; FUNCTIONS IN: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; INVOLVED IN: tetrahydrobiopterin biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional coactivator/pterin dehydratase (InterPro:IPR001533); BEST Arabidopsis thaliana protein match is: Transcriptional coactivator/pterin dehydratase (TAIR:AT1G29810.1). & (gnl|cdd|48349 : 84.8) no description available & (reliability: 444.0) & (original description: Putative pdl1, Description = Putative pterin-4-alpha-carbinolamine dehydratase, PFAM = PF01329)' T '35.2' 'not assigned.unknown' 'niben101scf04933_154949-164751' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04934_80976-83596' ' no hits & (original description: Putative , Description = , PFAM = PF00319)' T '35.2' 'not assigned.unknown' 'niben101scf04934_461595-476096' '(at5g06440 : 359.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT3G11720.3). & (reliability: 718.0) & (original description: Putative At3g11720, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04934_521416-523844' ' (original description: Putative , Description = , PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'niben101scf04939_353865-356338' ' no hits & (original description: Putative , Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf04940_13120-22276' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04940_191844-202272' '(at2g18220 : 724.0) Noc2p family; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0120 (InterPro:IPR005343); BEST Arabidopsis thaliana protein match is: Noc2p family (TAIR:AT3G55510.1); Has 4709 Blast hits to 3397 proteins in 331 species: Archae - 4; Bacteria - 179; Metazoa - 1693; Fungi - 681; Plants - 249; Viruses - 70; Other Eukaryotes - 1833 (source: NCBI BLink). & (q8lnu5|noc2l_orysa : 583.0) Nucleolar complex protein 2 homolog (Protein NOC2 homolog) - Oryza sativa (Rice) & (gnl|cdd|37467 : 536.0) no description available & (gnl|cdd|67337 : 337.0) no description available & (reliability: 1448.0) & (original description: Putative At2g18220, Description = Nucleolar complex protein 2 homolog, PFAM = PF03715)' T '35.2' 'not assigned.unknown' 'niben101scf04941_46177-58451' '(gnl|cdd|39684 : 136.0) no description available & (at1g04230 : 105.0) Protein of unknown function (DUF2361); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2361 (InterPro:IPR019310); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF2361) (TAIR:AT5G43720.1); Has 1174 Blast hits to 818 proteins in 194 species: Archae - 0; Bacteria - 26; Metazoa - 566; Fungi - 310; Plants - 87; Viruses - 6; Other Eukaryotes - 179 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative PGSC0003DMG400006092, Description = Putative uncharacterized protein Sb01g005120, PFAM = PF10153)' T '35.2' 'not assigned.unknown' 'niben101scf04941_178441-180545' ' no hits & (original description: Putative PGSC0003DMG400006087, Description = Lyk 6, PFAM = PF01476)' T '35.2' 'not assigned.unknown' 'niben101scf04941_178444-181310' ' no hits & (original description: Putative PGSC0003DMG400006087, Description = Lyk 6, PFAM = PF01476)' T '35.2' 'not assigned.unknown' 'niben101scf04941_189907-194572' '(at5g43750 : 246.0) NAD(P)H dehydrogenase 18 (NDH18); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative PnsB5, Description = NAD(P)H dehydrogenase 18, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04944_95990-98403' ' no hits & (original description: Putative , Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04944_372630-376009' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04950_313924-346174' ' no hits & (original description: Putative PGSC0003DMG400023578, Description = Hydroxyproline-rich glycoprotein family protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04950_359594-361947' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04950_397411-403611' '(at4g31400 : 248.0) Encodes CTF7, a homolog of the yeast CTF protein required for the formation of sister chromatid cohesion. Arabidopsis CTF7 is similar to Saccharomyces cerevisiae CTF7 in that it lacks an N-terminal extension, exhibits acetyltransferase activity, and can complement a yeast ctf7 temperature-sensitive mutation. Arabidopsis CTF7 is critical for female gametophyte and embryo development, but not for the establishment of mitotic cohesion during microgametogenesis or during endosperm development.; CTF7; FUNCTIONS IN: damaged DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: sister chromatid cohesion, embryo sac development, embryo development; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: DNA-repair protein, UmuC-like (InterPro:IPR001126); Has 328 Blast hits to 327 proteins in 141 species: Archae - 0; Bacteria - 2; Metazoa - 149; Fungi - 104; Plants - 43; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (gnl|cdd|38224 : 130.0) no description available & (reliability: 496.0) & (original description: Putative Os04g0498900, Description = Os04g0498900 protein, PFAM = PF13880;PF13878)' T '35.2' 'not assigned.unknown' 'niben101scf04950_468341-470814' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04950_673513-675866' ' no hits & (original description: Putative PGSC0003DMG402016214, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04953_940382-944053' ' (original description: Putative S1FA, Description = DNA-binding protein S1FA1, PFAM = PF04689)' T '35.2' 'not assigned.unknown' 'niben101scf04953_942910-948111' '(at2g37110 : 285.0) PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT2G40935.1); Has 380 Blast hits to 379 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 19; Plants - 350; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|86720 : 84.6) no description available & (reliability: 570.0) & (original description: Putative CNR8, Description = Cell number regulator 8, PFAM = PF04749)' T '35.2' 'not assigned.unknown' 'niben101scf04954_438555-477280' '(at4g14145 : 126.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative At4g14145, Description = At4g14145, PFAM = PF14138)' T '35.2' 'not assigned.unknown' 'niben101scf04958_217570-224408' '(at5g13030 : 956.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0061 (InterPro:IPR003846); Has 5046 Blast hits to 4997 proteins in 1211 species: Archae - 8; Bacteria - 2327; Metazoa - 120; Fungi - 134; Plants - 48; Viruses - 0; Other Eukaryotes - 2409 (source: NCBI BLink). & (gnl|cdd|80459 : 573.0) no description available & (gnl|cdd|37753 : 437.0) no description available & (reliability: 1912.0) & (original description: Putative At5g13030, Description = Putative uncharacterized protein At5g13030, PFAM = PF02696)' T '35.2' 'not assigned.unknown' 'niben101scf04958_233596-244910' '(at1g51130 : 167.0) Nse4, component of Smc5/6 DNA repair complex; CONTAINS InterPro DOMAIN/s: Nse4 (InterPro:IPR014854); BEST Arabidopsis thaliana protein match is: Nse4, component of Smc5/6 DNA repair complex (TAIR:AT3G20760.1); Has 297 Blast hits to 295 proteins in 132 species: Archae - 0; Bacteria - 0; Metazoa - 72; Fungi - 132; Plants - 74; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|38077 : 111.0) no description available & (gnl|cdd|72167 : 84.2) no description available & (reliability: 334.0) & (original description: Putative PGSC0003DMG400034787, Description = , PFAM = PF08743)' T '35.2' 'not assigned.unknown' 'niben101scf04963_211249-239021' '(at2g02410 : 308.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF901 (InterPro:IPR010298). & (gnl|cdd|69511 : 131.0) no description available & (reliability: 616.0) & (original description: Putative LOC100217107, Description = Expressed protein (With alternative splicing), PFAM = PF05991)' T '35.2' 'not assigned.unknown' 'niben101scf04963_513938-517426' '(at2g02370 : 362.0) SNARE associated Golgi protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT1G12450.1); Has 2420 Blast hits to 2420 proteins in 703 species: Archae - 6; Bacteria - 1288; Metazoa - 120; Fungi - 130; Plants - 226; Viruses - 0; Other Eukaryotes - 650 (source: NCBI BLink). & (gnl|cdd|87885 : 91.0) no description available & (reliability: 724.0) & (original description: Putative At2g02370, Description = At2g02370/T16F16.16, PFAM = PF09335)' T '35.2' 'not assigned.unknown' 'niben101scf04969_370931-373393' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04973_209160-211675' '(at3g03280 : 102.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17350.1); Has 137 Blast hits to 137 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative , Description = , PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf04977_114337-127913' '(at2g20310 : 116.0) Encodes RPM1 Interacting Protein 13 (RIN13), a resistance protein interactor shown to positively enhance resistance function of RPM1.; RPM1 interacting protein 13 (RIN13); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28690.1); Has 124 Blast hits to 118 proteins in 30 species: Archae - 2; Bacteria - 0; Metazoa - 13; Fungi - 2; Plants - 98; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative RIN13, Description = 28 kDa ribonucleoprotein, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04989_168767-171201' '(at1g53035 : 152.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15358.1); Has 49 Blast hits to 49 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative At1g53035, Description = At1g53031, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04992_188996-193160' ' no hits & (original description: Putative NFD6, Description = At1g28395, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04992_231101-233625' '(at4g03600 : 121.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative BnaA09g50870D, Description = BnaA09g50870D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04993_516146-525843' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf04995_173903-177147' '(at5g42860 : 274.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G45688.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 548.0) & (original description: Putative BnaA10g05480D, Description = BnaA10g05480D protein, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'niben101scf04995_1297690-1311654' ' no hits & (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf04995_1550518-1554939' '(at3g19540 : 545.0) Protein of unknown function (DUF620); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF620 (InterPro:IPR006873); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF620) (TAIR:AT1G49840.1); Has 219 Blast hits to 218 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 219; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68363 : 426.0) no description available & (reliability: 1090.0) & (original description: Putative BnaCnng57140D, Description = BnaCnng57140D protein, PFAM = PF04788)' T '35.2' 'not assigned.unknown' 'niben101scf04995_1782498-1789804' '(at1g27700 : 248.0) Syntaxin/t-SNARE family protein; INVOLVED IN: Golgi vesicle transport, vesicle-mediated transport; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: t-SNARE (InterPro:IPR010989), Syntaxin 6, N-terminal (InterPro:IPR015260); BEST Arabidopsis thaliana protein match is: Syntaxin/t-SNARE family protein (TAIR:AT4G30240.1); Has 134 Blast hits to 133 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87826 : 97.6) no description available & (reliability: 496.0) & (original description: Putative At1g27700, Description = At1g27700/T22C5_14, PFAM = PF09177)' T '35.2' 'not assigned.unknown' 'niben101scf04998_179402-181938' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05002_248123-250467' '(at1g17455 : 142.0) ELF4-like 4 (ELF4-L4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1313 (InterPro:IPR009741); BEST Arabidopsis thaliana protein match is: ELF4-like 2 (TAIR:AT1G72630.1); Has 149 Blast hits to 148 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 148; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|70474 : 123.0) no description available & (reliability: 284.0) & (original description: Putative EFL4, Description = Protein ELF4-LIKE 4, PFAM = PF07011)' T '35.2' 'not assigned.unknown' 'niben101scf05004_552369-556442' '(gnl|cdd|38515 : 197.0) no description available & (at5g10700 : 187.0) Peptidyl-tRNA hydrolase II (PTH2) family protein; FUNCTIONS IN: aminoacyl-tRNA hydrolase activity, protein tyrosine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, translation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-tRNA hydrolase, PTH2 (InterPro:IPR002833), Protein-tyrosine phosphatase, low molecular weight (InterPro:IPR017867); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|48404 : 178.0) no description available & (reliability: 374.0) & (original description: Putative PTRHD1, Description = Putative peptidyl-tRNA hydrolase PTRHD1, PFAM = PF01981)' T '35.2' 'not assigned.unknown' 'niben101scf05004_556555-560567' ' no hits & (original description: Putative PGSC0003DMG400029280, Description = , PFAM = PF07839)' T '35.2' 'not assigned.unknown' 'niben101scf05005_239643-242332' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05009_63312-65647' ' no hits & (original description: Putative PGSC0003DMG400029159, Description = F24J8.11 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05011_179608-181952' ' no hits & (original description: Putative PGSC0003DMG400008257, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05012_211777-219758' ' no hits & (original description: Putative , Description = , PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben101scf05014_93366-103704' '(at1g74830 : 318.0) Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT1G18990.1); Has 3601 Blast hits to 3088 proteins in 462 species: Archae - 26; Bacteria - 544; Metazoa - 962; Fungi - 241; Plants - 560; Viruses - 41; Other Eukaryotes - 1227 (source: NCBI BLink). & (gnl|cdd|68159 : 117.0) no description available & (reliability: 636.0) & (original description: Putative MYOB6, Description = Probable myosin-binding protein 6, PFAM = PF04576)' T '35.2' 'not assigned.unknown' 'niben101scf05014_158779-161639' ' no hits & (original description: Putative , Description = , PFAM = PF00403)' T '35.2' 'not assigned.unknown' 'niben101scf05017_547898-554596' '(at2g39910 : 388.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF2454 (InterPro:IPR018870); Has 85 Blast hits to 84 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 776.0) & (original description: Putative Sb10g028350, Description = Putative uncharacterized protein Sb10g028350, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05017_770650-777723' '(at2g39950 : 358.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 941 Blast hits to 229 proteins in 79 species: Archae - 0; Bacteria - 8; Metazoa - 89; Fungi - 54; Plants - 41; Viruses - 0; Other Eukaryotes - 749 (source: NCBI BLink). & (reliability: 716.0) & (original description: Putative F383_12855, Description = Translation initiation factor 2 subunit gamma, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05018_227857-243724' '(at4g19390 : 228.0) Uncharacterised protein family (UPF0114); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0114, plant (InterPro:IPR016804), Uncharacterised protein family UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0114) (TAIR:AT5G13720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86300 : 112.0) no description available & (reliability: 456.0) & (original description: Putative AY107414, Description = Uncharacterized protein family UPF0114, PFAM = PF03350)' T '35.2' 'not assigned.unknown' 'niben101scf05029_95131-97778' ' no hits & (original description: Putative MTA, Description = Metallothionein-like protein type 2 A, PFAM = PF01439)' T '35.2' 'not assigned.unknown' 'niben101scf05029_227440-233016' ' no hits & (original description: Putative mt1k, Description = Metallothionein-like type 1 protein, PFAM = PF01439)' T '35.2' 'not assigned.unknown' 'niben101scf05034_502248-507358' '(at5g52220 : 122.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607). & (gnl|cdd|39687 : 106.0) no description available & (reliability: 244.0) & (original description: Putative Sb02g020730, Description = Putative uncharacterized protein Sb02g020730, PFAM = PF09696)' T '35.2' 'not assigned.unknown' 'niben101scf05034_662769-668588' '(at4g00585 : 119.0) unknown protein; Has 47 Blast hits to 47 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 7; Plants - 33; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative At4g00585, Description = Putative uncharacterized protein At4g00585, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05038_108115-116566' '(at2g14910 : 364.0) unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G14970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 728.0) & (original description: Putative PM23, Description = Seed maturation protein PM23, PFAM = PF05542;PF05542)' T '35.2' 'not assigned.unknown' 'niben101scf05041_20648-23749' ' (original description: Putative , Description = , PFAM = PF07279)' T '35.2' 'not assigned.unknown' 'niben101scf05042_7905-62050' '(at1g14590 : 371.0) Nucleotide-diphospho-sugar transferase family protein; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT2G02061.1); Has 314 Blast hits to 308 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 294; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 742.0) & (original description: Putative BnaA09g17330D, Description = Glycosyltransferase, PFAM = PF03407)' T '35.2' 'not assigned.unknown' 'niben101scf05044_30256-44456' '(at1g80000 : 185.0) CASC3/Barentsz eIF4AIII binding; CONTAINS InterPro DOMAIN/s: CASC3/Barentsz eIF4AIII binding (InterPro:IPR018545); BEST Arabidopsis thaliana protein match is: CASC3/Barentsz eIF4AIII binding (TAIR:AT1G15280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|87950 : 81.2) no description available & (reliability: 370.0) & (original description: Putative POPTR_0003s05520g, Description = Glycine-rich family protein, PFAM = PF09405)' T '35.2' 'not assigned.unknown' 'niben101scf05044_87272-89950' ' no hits & (original description: Putative PGSC0003DMG400002652, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05044_288069-292100' '(at1g52343 : 87.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative , Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05044_358315-360653' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05044_385667-392866' '(at4g13270 : 172.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G52330.1); Has 193 Blast hits to 193 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 193; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative At4g13270, Description = At4g13270, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'niben101scf05044_417268-422174' '(at1g79910 : 184.0) Regulator of Vps4 activity in the MVB pathway protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061); BEST Arabidopsis thaliana protein match is: Regulator of Vps4 activity in the MVB pathway protein (TAIR:AT1G52315.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37238 : 146.0) no description available & (gnl|cdd|67036 : 120.0) no description available & (reliability: 368.0) & (original description: Putative BnaA07g35910D, Description = BnaA07g35910D protein, PFAM = PF03398)' T '35.2' 'not assigned.unknown' 'niben101scf05044_510362-524642' '(gnl|cdd|68437 : 494.0) no description available & (at5g11420 : 493.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF642 (TAIR:AT5G25460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 986.0) & (original description: Putative At5g25460, Description = At5g25460, PFAM = PF04862;PF04862)' T '35.2' 'not assigned.unknown' 'niben101scf05047_39984-46652' '(at5g11640 : 247.0) Thioredoxin superfamily protein; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36132 : 198.0) no description available & (gnl|cdd|48511 : 154.0) no description available & (reliability: 494.0) & (original description: Putative BnaA10g20930D, Description = BnaA10g20930D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05047_365354-369980' '(at1g76660 : 335.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G52430.1); Has 353 Blast hits to 231 proteins in 60 species: Archae - 0; Bacteria - 6; Metazoa - 57; Fungi - 22; Plants - 125; Viruses - 4; Other Eukaryotes - 139 (source: NCBI BLink). & (reliability: 670.0) & (original description: Putative At1g76660, Description = Uncharacterized protein At1g76660, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05047_369981-383247' '(at1g21065 : 256.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0047 (InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins in 1137 species: Archae - 215; Bacteria - 2154; Metazoa - 42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes - 1191 (source: NCBI BLink). & (gnl|cdd|38477 : 227.0) no description available & (gnl|cdd|30781 : 159.0) no description available & (reliability: 512.0) & (original description: Putative alr, Description = Secondary thiamine-phosphate synthase enzyme, PFAM = PF01894)' T '35.2' 'not assigned.unknown' 'niben101scf05056_142739-145275' ' no hits & (original description: Putative , Description = , PFAM = PF00168)' T '35.2' 'not assigned.unknown' 'niben101scf05056_200245-227147' '(at4g11670 : 903.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT5G06970.1); Has 193 Blast hits to 179 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 8; Plants - 166; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|69201 : 316.0) no description available & (reliability: 1806.0) & (original description: Putative F383_17806, Description = DNA topoisomerase 4 subunit B, PFAM = PF05664)' T '35.2' 'not assigned.unknown' 'niben101scf05056_326690-330027' ' no hits & (original description: Putative , Description = 2S albumin seed storage protein, PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'niben101scf05057_244668-252455' '(at2g21870 : 267.0) MALE GAMETOPHYTE DEFECTIVE 1 (MGP1); FUNCTIONS IN: copper ion binding, cobalt ion binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, nucleolus, chloroplast, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; Has 56 Blast hits to 56 proteins in 21 species: Archae - 2; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 534.0) & (original description: Putative mgp1, Description = Male gametophyte defective 1, PFAM = PF15704)' T '35.2' 'not assigned.unknown' 'niben101scf05057_382702-389973' '(at1g22750 : 198.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1475 (InterPro:IPR009943); Has 186 Blast hits to 155 proteins in 21 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). & (gnl|cdd|70795 : 194.0) no description available & (reliability: 396.0) & (original description: Putative At1g22750, Description = Putative uncharacterized protein At1g22750, PFAM = PF07343;PF07343)' T '35.2' 'not assigned.unknown' 'niben101scf05057_575424-581381' '(at1g71780 : 211.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 34 Blast hits to 34 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative BnaC06g32750D, Description = BnaC06g32750D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05060_196245-201584' '(at1g20770 : 141.0) unknown protein; Has 59 Blast hits to 59 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative PGSC0003DMG400001324, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05061_56606-70740' ' no hits & (original description: Putative PGSC0003DMG402010824, Description = BnaC09g52720D protein, PFAM = PF09805)' T '35.2' 'not assigned.unknown' 'niben101scf05061_383753-390991' '(at1g11170 : 501.0) Protein of unknown function (DUF707); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G61240.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68772 : 316.0) no description available & (reliability: 1002.0) & (original description: Putative At1g11170, Description = At1g11170/T28P6_16, PFAM = PF05212)' T '35.2' 'not assigned.unknown' 'niben101scf05062_308527-346412' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05063_300281-317162' '(at2g06005 : 421.0) Encodes one of the FRI interacting proteins: FRIGIDA INTERACTING PROTEIN 1 (FIP1)/At2g06005, FIP2/ At4g17060. FRI (At4G00650) is a major determinant of natural variation in Arabidopsis flowering time.; FRIGIDA interacting protein 1 (FIP1); FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G20580.2); Has 283 Blast hits to 279 proteins in 95 species: Archae - 0; Bacteria - 30; Metazoa - 98; Fungi - 20; Plants - 56; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (reliability: 842.0) & (original description: Putative FIP1, Description = Expressed protein, PFAM = PF14802)' T '35.2' 'not assigned.unknown' 'niben101scf05063_385845-393309' '(at2g28230 : 338.0) TATA-binding related factor (TRF) of subunit 20 of Mediator complex; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med20 (InterPro:IPR013921); BEST Arabidopsis thaliana protein match is: TATA-binding related factor (TRF) of subunit 20 of Mediator complex (TAIR:AT4G09070.1); Has 80 Blast hits to 80 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|87577 : 171.0) no description available & (gnl|cdd|36597 : 166.0) no description available & (reliability: 676.0) & (original description: Putative MED20A, Description = Mediator of RNA polymerase II transcription subunit 20a, PFAM = PF08612)' T '35.2' 'not assigned.unknown' 'niben101scf05066_14445-26372' '(at5g13250 : 151.0) RING finger protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: RING finger protein (TAIR:AT1G28080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05077_52168-54836' ' no hits & (original description: Putative PGSC0003DMG400045123, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05078_146052-148381' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05078_328264-347931' ' (original description: Putative mtaD, Description = 5-methylthioadenosine/S-adenosylhomocysteine deaminase, PFAM = PF01979)' T '35.2' 'not assigned.unknown' 'niben101scf05082_235747-238997' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05082_500526-502648' ' no hits & (original description: Putative , Description = Basic-leucine zipper domain-containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05087_506815-516314' '(at3g50430 : 310.0) unknown protein; Has 54 Blast hits to 54 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 29; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 620.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF14695;PF14694)' T '35.2' 'not assigned.unknown' 'niben101scf05092_80936-83175' ' no hits & (original description: Putative coxC, Description = Cytochrome c oxidase copper chaperone, PFAM = PF05051)' T '35.2' 'not assigned.unknown' 'niben101scf05094_110923-113858' '(at5g05950 : 203.0) maternal effect embryo arrest 60 (MEE60); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 406.0) & (original description: Putative MEE60, Description = At5g05950, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05095_108694-110897' ' no hits & (original description: Putative Sb03g039900, Description = Putative uncharacterized protein Sb03g039900, PFAM = PF11820)' T '35.2' 'not assigned.unknown' 'niben101scf05099_90575-92849' ' no hits & (original description: Putative RPL29B, Description = 60S ribosomal protein L29-2, PFAM = PF01779)' T '35.2' 'not assigned.unknown' 'niben101scf05100_152734-162650' '(at5g42850 : 156.0) Thioredoxin superfamily protein; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Protein of unknown function DUF953, thioredoxin-like (InterPro:IPR010357); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38635 : 128.0) no description available & (gnl|cdd|87022 : 121.0) no description available & (reliability: 312.0) & (original description: Putative At5g42850, Description = Thioredoxin-like protein Clot, PFAM = PF06110)' T '35.2' 'not assigned.unknown' 'niben101scf05103_67182-70444' '(at2g24530 : 277.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 554.0) & (original description: Putative PGSC0003DMG400028915, Description = Transcriptional coactivator Hfi1/Transcriptional adapter 1, PFAM = PF12767)' T '35.2' 'not assigned.unknown' 'niben101scf05107_19357-21956' ' no hits & (original description: Putative NDR1, Description = NDR1-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05107_98063-100395' '(at5g24860 : 118.0) encodes a small protein of 12.6 kDa that regulates flowering and is involved in gibberellin signalling pathway. It is expressed in apical meristems immediately after the photoperiodic induction of flowering. Genetic interactions with flowering time and floral organ identity genes suggest that this gene may be involved in modulating the competence to flower. There are two other genes similar to FPF1, FLP1 (At4g31380) and FLP2 (no locus name yet, on BAC F8F16 on chr 4). This is so far a plant-specific gene and is only found in long-day mustard, arabidopsis, and rice.; FLOWERING PROMOTING FACTOR 1 (FPF1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to gibberellin stimulus, positive regulation of flower development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10625.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative F6A4, Description = AtFPF1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05108_104296-110871' '(at4g12680 : 634.0) unknown protein; INVOLVED IN: vegetative to reproductive phase transition of meristem; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40640.1); Has 103 Blast hits to 103 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1268.0) & (original description: Putative At3g27390, Description = Uncharacterized membrane protein At3g27390, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05108_244277-250245' '(at5g48240 : 216.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 286 Blast hits to 283 proteins in 145 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 97; Plants - 41; Viruses - 1; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative At5g48240, Description = RRP15-like protein, PFAM = PF07890)' T '35.2' 'not assigned.unknown' 'niben101scf05109_423214-425496' ' no hits & (original description: Putative , Description = , PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf05109_425497-429403' '(at2g12646 : 324.0) PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT3G60670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86704 : 161.0) no description available & (reliability: 648.0) & (original description: Putative Sb10g026620, Description = Putative uncharacterized protein Sb10g026620, PFAM = PF04640)' T '35.2' 'not assigned.unknown' 'niben101scf05112_31851-40576' '(at5g52960 : 180.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3143 (InterPro:IPR021489); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative F383_31895, Description = tRNA dimethylallyltransferase, PFAM = PF11341)' T '35.2' 'not assigned.unknown' 'niben101scf05112_199017-209286' '(at5g62650 : 616.0) Tic22-like family protein; CONTAINS InterPro DOMAIN/s: Tic22-like (InterPro:IPR007378); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1232.0) & (original description: Putative F383_30763, Description = U1 small nuclear ribonucleoprotein component SNU71, PFAM = PF04278)' T '35.2' 'not assigned.unknown' 'niben101scf05118_491867-497919' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05118_596830-599573' '(at5g64010 : 180.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 34 Blast hits to 34 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative At5g64010, Description = U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1, putative isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05118_744659-750110' '(at2g45990 : 439.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 878.0) & (original description: Putative CPLD7, Description = AT2G45990 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05123_299988-303028' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05124_204363-207250' '(at2g04220 : 383.0) Plant protein of unknown function (DUF868); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT4G12690.2); Has 284 Blast hits to 282 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 284; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69434 : 353.0) no description available & (reliability: 766.0) & (original description: Putative BnaA07g04720D, Description = BnaA07g04720D protein, PFAM = PF05910)' T '35.2' 'not assigned.unknown' 'niben101scf05132_31173-40984' ' no hits & (original description: Putative , Description = , PFAM = PF06911)' T '35.2' 'not assigned.unknown' 'niben101scf05133_544704-549987' '(gnl|cdd|69161 : 320.0) no description available & (at4g03420 : 311.0) Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G03610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 622.0) & (original description: Putative At4g03420, Description = At4g16100, PFAM = PF05623)' T '35.2' 'not assigned.unknown' 'niben101scf05135_120249-124158' '(at3g50120 : 759.0) Plant protein of unknown function (DUF247); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50170.1); Has 1189 Blast hits to 1046 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1189; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66792 : 497.0) no description available & (reliability: 1518.0) & (original description: Putative Sb06g021880, Description = Putative uncharacterized protein Sb06g021880, PFAM = PF03140)' T '35.2' 'not assigned.unknown' 'niben101scf05135_479452-482375' '(at5g67210 : 408.0) Protein of unknown function (DUF579); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF579 (InterPro:IPR021148), Conserved hypothetical protein CHP01627 (InterPro:IPR006514); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF579) (TAIR:AT3G50220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68247 : 315.0) no description available & (reliability: 816.0) & (original description: Putative DUF579, Description = DUF579 protein, PFAM = PF04669)' T '35.2' 'not assigned.unknown' 'niben101scf05135_702625-705127' ' (original description: Putative rTeg1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF07727)' T '35.2' 'not assigned.unknown' 'niben101scf05137_116361-118897' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'niben101scf05146_747151-756272' '(at1g64570 : 387.0) DUO POLLEN 3 (DUO3); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057); Has 1836 Blast hits to 1575 proteins in 289 species: Archae - 4; Bacteria - 248; Metazoa - 589; Fungi - 287; Plants - 112; Viruses - 46; Other Eukaryotes - 550 (source: NCBI BLink). & (reliability: 774.0) & (original description: Putative DUO3, Description = DUO pollen 3-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05146_940569-956515' '(gnl|cdd|69161 : 130.0) no description available & (at1g15030 : 93.6) Encodes a Cysteine-rich peptide (CRP) family protein; Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT2G01260.1); Has 315 Blast hits to 313 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 311; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative glysoja_023868, Description = DNA-directed RNA polymerases I, II, and III subunit RPABC4, PFAM = PF05623)' T '35.2' 'not assigned.unknown' 'niben101scf05146_968034-975661' '(at5g57280 : 359.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, methyltransferase, Williams-Beuren syndrome (InterPro:IPR022238), Methyltransferase type 11 (InterPro:IPR013216); Has 984 Blast hits to 969 proteins in 433 species: Archae - 16; Bacteria - 445; Metazoa - 145; Fungi - 145; Plants - 54; Viruses - 0; Other Eukaryotes - 179 (source: NCBI BLink). & (gnl|cdd|36754 : 340.0) no description available & (reliability: 718.0) & (original description: Putative Wbscr22, Description = Probable 18S rRNA (guanine-N(7))-methyltransferase, PFAM = PF12589;PF08241)' T '35.2' 'not assigned.unknown' 'niben101scf05147_133860-136793' '(gnl|cdd|71982 : 97.4) no description available & (at1g16810 : 90.5) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1754, eukaryotic (InterPro:IPR013865); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative Sb04g000960, Description = Putative uncharacterized protein Sb04g000960, PFAM = PF08555)' T '35.2' 'not assigned.unknown' 'niben101scf05147_152721-155095' ' no hits & (original description: Putative Sb01g035690, Description = Putative uncharacterized protein Sb01g035690, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05154_203894-206948' '(at5g53030 : 86.3) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05155_39882-44990' ' no hits & (original description: Putative BnaA06g14190D, Description = BnaA06g14190D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05158_3057-6481' '(at1g80310 : 490.0) sulfate transmembrane transporters; FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547); BEST Arabidopsis thaliana protein match is: molybdate transporter 1 (TAIR:AT2G25680.1); Has 846 Blast hits to 836 proteins in 367 species: Archae - 24; Bacteria - 581; Metazoa - 20; Fungi - 62; Plants - 71; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 980.0) & (original description: Putative MOT2, Description = Molybdate transporter 2, PFAM = PF16983;PF16983)' T '35.2' 'not assigned.unknown' 'niben101scf05158_265657-279508' '(at1g48950 : 403.0) C3HC zinc finger-like ; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC-like (InterPro:IPR012935); BEST Arabidopsis thaliana protein match is: IAP-like protein 1 (TAIR:AT1G17210.1); Has 249 Blast hits to 238 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 75; Fungi - 80; Plants - 75; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|39962 : 162.0) no description available & (gnl|cdd|71404 : 139.0) no description available & (reliability: 806.0) & (original description: Putative Sb03g027246, Description = Putative uncharacterized protein Sb03g027246, PFAM = PF07967)' T '35.2' 'not assigned.unknown' 'niben101scf05159_305838-321756' ' (original description: Putative PGSC0003DMG400007133, Description = DUF2146 family protein, PFAM = PF10220;PF10220;PF10220;PF10220)' T '35.2' 'not assigned.unknown' 'niben101scf05160_118087-120515' ' no hits & (original description: Putative PGSC0003DMG400041960, Description = , PFAM = PF05938)' T '35.2' 'not assigned.unknown' 'niben101scf05166_621148-626956' '(at1g18850 : 342.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 40 Blast hits to 40 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 684.0) & (original description: Putative F6A14.6, Description = F6A14.6 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05173_944582-947397' ' (original description: Putative DORA, Description = AP2-domain DNA-binding protein, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'niben101scf05175_381557-394178' '(at5g08550 : 640.0) Encodes a transcriptional repressor that is homologous to the C-terminal region of mammalian GC binding factor. It regulates endoreduplication through control of CYC2A expression.; increased level of polyploidy1-1D (ILP1); CONTAINS InterPro DOMAIN/s: GC-rich sequence DNA-binding factor-like (InterPro:IPR012890); BEST Arabidopsis thaliana protein match is: GC-rich sequence DNA-binding factor-like protein (TAIR:AT5G09210.1); Has 786 Blast hits to 745 proteins in 186 species: Archae - 2; Bacteria - 46; Metazoa - 439; Fungi - 95; Plants - 69; Viruses - 1; Other Eukaryotes - 134 (source: NCBI BLink). & (gnl|cdd|87385 : 433.0) no description available & (gnl|cdd|37347 : 95.5) no description available & (reliability: 1280.0) & (original description: Putative ILP1, Description = GC-rich sequence DNA-binding factor-like protein ILP1, PFAM = PF07842)' T '35.2' 'not assigned.unknown' 'niben101scf05177_132987-137256' '(at5g23340 : 526.0) RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT4G15475.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39542 : 131.0) no description available & (reliability: 1052.0) & (original description: Putative OJ1581_H09.8, Description = Putative F-box protein FBL2, PFAM = PF13516;PF13516;PF13516;PF13516;PF13516)' T '35.2' 'not assigned.unknown' 'niben101scf05177_187793-190523' '(at4g13400 : 489.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G63290.1); Has 390 Blast hits to 389 proteins in 142 species: Archae - 0; Bacteria - 106; Metazoa - 14; Fungi - 122; Plants - 74; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 978.0) & (original description: Putative 2133, Description = Predicted protein, PFAM = PF14226)' T '35.2' 'not assigned.unknown' 'niben101scf05183_193801-196489' ' no hits & (original description: Putative PGSC0003DMG400037713, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05183_377478-379822' ' no hits & (original description: Putative , Description = , PFAM = PF03732)' T '35.2' 'not assigned.unknown' 'niben101scf05183_768116-784197' '(at5g63220 : 415.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0363 (InterPro:IPR007317); Has 304 Blast hits to 301 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 121; Plants - 35; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|38234 : 179.0) no description available & (gnl|cdd|67790 : 91.6) no description available & (reliability: 830.0) & (original description: Putative At5g63220, Description = At5g63220, PFAM = PF04190)' T '35.2' 'not assigned.unknown' 'niben101scf05190_403128-405703' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05193_199957-202770' ' no hits & (original description: Putative PSK1, Description = Putative phytosulfokine peptide, PFAM = PF06404)' T '35.2' 'not assigned.unknown' 'niben101scf05196_69338-73058' '(at1g75160 : 441.0) Protein of unknown function (DUF620); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF620 (InterPro:IPR006873); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF620) (TAIR:AT5G66740.1); Has 216 Blast hits to 215 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 216; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68363 : 353.0) no description available & (reliability: 882.0) & (original description: Putative At3g19540, Description = Glutamyl-tRNA (Gln) amidotransferase subunit A, PFAM = PF04788)' T '35.2' 'not assigned.unknown' 'niben101scf05201_39713-44992' '(at3g07910 : 87.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reactive oxygen species modulator 1 (InterPro:IPR018450); Has 192 Blast hits to 192 proteins in 80 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 6; Plants - 39; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative BnaA05g29770D, Description = BnaA05g29770D protein, PFAM = PF10247)' T '35.2' 'not assigned.unknown' 'niben101scf05201_324450-329744' '(at2g26810 : 317.0) Putative methyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G26200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 634.0) & (original description: Putative At2g26810, Description = Putative methyltransferase family protein, PFAM = PF10294)' T '35.2' 'not assigned.unknown' 'niben101scf05203_372974-378030' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05206_238869-241744' ' no hits & (original description: Putative PGSC0003DMG400013677, Description = , PFAM = PF00403)' T '35.2' 'not assigned.unknown' 'niben101scf05211_45666-48850' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05211_53524-60356' '(at4g22830 : 158.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2499 (InterPro:IPR019634). & (reliability: 316.0) & (original description: Putative sll0608, Description = Ycf49-like protein, PFAM = PF10693)' T '35.2' 'not assigned.unknown' 'niben101scf05216_912645-916983' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05216_920416-924923' '(at1g55480 : 367.0) Encodes a member of a novel plant protein family containing a PDZ, a K-box, and a TPR motif. mRNA but not protein levels decrease after wounding. ZKT is phosphorylated at Thr and Ser residues after wounding.; protein containing PDZ domain, a K-box domain, and a TPR region (ZKT); FUNCTIONS IN: binding; INVOLVED IN: response to wounding; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), PDZ/DHR/GLGF (InterPro:IPR001478), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: rubredoxin family protein (TAIR:AT5G17170.2); Has 316 Blast hits to 316 proteins in 83 species: Archae - 2; Bacteria - 103; Metazoa - 8; Fungi - 2; Plants - 160; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (reliability: 734.0) & (original description: Putative ZKT, Description = GAN, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05220_91843-97481' ' no hits & (original description: Putative PGSC0003DMG400030714, Description = RING/U-box superfamily protein, putative, PFAM = PF00097)' T '35.2' 'not assigned.unknown' 'niben101scf05222_162263-169297' '(at2g36420 : 124.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03670.1); Has 10588 Blast hits to 6606 proteins in 440 species: Archae - 8; Bacteria - 365; Metazoa - 4146; Fungi - 1198; Plants - 483; Viruses - 212; Other Eukaryotes - 4176 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative PGSC0003DMG400028260, Description = , PFAM = PF14309)' T '35.2' 'not assigned.unknown' 'niben101scf05222_299490-304336' '(at3g09980 : 140.0) Family of unknown function (DUF662) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF662 (InterPro:IPR007033); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF662) (TAIR:AT2G36410.2); Has 2513 Blast hits to 2174 proteins in 327 species: Archae - 81; Bacteria - 288; Metazoa - 1019; Fungi - 163; Plants - 196; Viruses - 10; Other Eukaryotes - 756 (source: NCBI BLink). & (gnl|cdd|86752 : 137.0) no description available & (reliability: 280.0) & (original description: Putative BnaC06g14260D, Description = BnaC06g14260D protein, PFAM = PF04949)' T '35.2' 'not assigned.unknown' 'niben101scf05226_174066-179068' '(at1g76250 : 526.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 74 Blast hits to 74 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 1052.0) & (original description: Putative BnaA07g21460D, Description = BnaA07g21460D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05226_398701-404371' '(at1g42960 : 126.0) expressed protein localized to the inner membrane of the chloroplast.; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16660.1); Has 120 Blast hits to 120 proteins in 39 species: Archae - 0; Bacteria - 43; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative F13A11.2, Description = Chloroplast inner membrane localized protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05226_815476-837713' '(at1g21065 : 262.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0047 (InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins in 1137 species: Archae - 215; Bacteria - 2154; Metazoa - 42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes - 1191 (source: NCBI BLink). & (gnl|cdd|38477 : 231.0) no description available & (gnl|cdd|30781 : 157.0) no description available & (reliability: 524.0) & (original description: Putative alr, Description = Alanine racemase, PFAM = PF01894)' T '35.2' 'not assigned.unknown' 'niben101scf05229_41694-54095' '(at1g14300 : 435.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0507 (InterPro:IPR007205), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Uncharacterised protein family UPF0507, C-terminal (InterPro:IPR007206). & (gnl|cdd|38184 : 245.0) no description available & (gnl|cdd|86526 : 160.0) no description available & (reliability: 870.0) & (original description: Putative ZOSMA_89G00930, Description = DNA-binding protein HGH1, PFAM = PF04064;PF04063)' T '35.2' 'not assigned.unknown' 'niben101scf05229_468218-474955' '(at2g46420 : 464.0) Plant protein 1589 of unknown function; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476); BEST Arabidopsis thaliana protein match is: Plant protein 1589 of unknown function (TAIR:AT3G61700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|88257 : 101.0) no description available & (reliability: 928.0) & (original description: Putative F383_02743, Description = Putative helicase with zinc finger domain, PFAM = PF09713)' T '35.2' 'not assigned.unknown' 'niben101scf05230_131145-133600' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05230_314692-329290' '(at3g27470 : 556.0) Protein of unknown function (DUF707); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G67850.2); Has 321 Blast hits to 320 proteins in 25 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 305; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|68772 : 519.0) no description available & (reliability: 1112.0) & (original description: Putative Sb03g043390, Description = Putative uncharacterized protein Sb03g043390, PFAM = PF05212)' T '35.2' 'not assigned.unknown' 'niben101scf05230_314932-329263' '(at3g27470 : 531.0) Protein of unknown function (DUF707); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G67850.2); Has 321 Blast hits to 320 proteins in 25 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 305; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|68772 : 516.0) no description available & (reliability: 1062.0) & (original description: Putative At3g27470, Description = Putative uncharacterized protein At3g27473, PFAM = PF05212)' T '35.2' 'not assigned.unknown' 'niben101scf05231_92330-96279' '(at4g15802 : 97.1) Encodes a protein with similarity to heat shock factor binding proteins. Involved in negative regulation of heat shock response. Becomes nuclear localized upon heat treatment.; heat shock factor binding protein (HSBP); CONTAINS InterPro DOMAIN/s: Heat shock factor binding 1 (InterPro:IPR009643); Has 319 Blast hits to 319 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 183; Fungi - 14; Plants - 74; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative emp2, Description = Heat shock factor-binding protein 1, PFAM = PF06825)' T '35.2' 'not assigned.unknown' 'niben101scf05231_247856-258251' '(at4g15890 : 1170.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chromosome condensation protein, HCP-6-related (InterPro:IPR012371), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: binding (TAIR:AT3G57060.1); Has 443 Blast hits to 428 proteins in 158 species: Archae - 0; Bacteria - 0; Metazoa - 188; Fungi - 128; Plants - 61; Viruses - 3; Other Eukaryotes - 63 (source: NCBI BLink). & (gnl|cdd|35634 : 938.0) no description available & (reliability: 2340.0) & (original description: Putative dl3985w, Description = Condensation complex subunit 1 domain-containing protein, PFAM = PF12717;PF12717)' T '35.2' 'not assigned.unknown' 'niben101scf05233_72836-77084' '(at2g32910 : 156.0) DCD (Development and Cell Death) domain protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative , Description = , PFAM = PF10539)' T '35.2' 'not assigned.unknown' 'niben101scf05234_1002-6411' '(at2g03420 : 130.0) unknown protein; Has 38 Blast hits to 38 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05238_230086-234337' ' no hits & (original description: Putative , Description = , PFAM = PF00076;PF00031)' T '35.2' 'not assigned.unknown' 'niben101scf05238_232969-235301' ' no hits & (original description: Putative PSBT, Description = Photosystem II 5 kDa protein, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05239_57463-148993' '(at1g24706 : 2085.0) Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.; THO2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: THO complex, subunitTHOC2, C-region (InterPro:IPR021418), THO complex, subunitTHOC2, N-region (InterPro:IPR021726). & (gnl|cdd|37085 : 994.0) no description available & (reliability: 4170.0) & (original description: Putative THO2, Description = THO complex subunit 2, PFAM = PF16134;PF16134;PF11262;PF11732)' T '35.2' 'not assigned.unknown' 'niben101scf05245_78633-81172' ' no hits & (original description: Putative PGSC0003DMG400021150, Description = , PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'niben101scf05245_321653-324960' '(at3g05320 : 526.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1052.0) & (original description: Putative fut12, Description = Protein-O-fucosyltransferase 1, PFAM = PF10250)' T '35.2' 'not assigned.unknown' 'niben101scf05246_104643-109425' '(at4g28310 : 99.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative Os06g0115700, Description = Os06g0115700 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05246_204888-210885' '(at5g02390 : 223.0) Protein of unknown function (DUF3741); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative , Description = , PFAM = PF14309;PF12552)' T '35.2' 'not assigned.unknown' 'niben101scf05250_226424-228918' ' no hits & (original description: Putative PGSC0003DMG400027576, Description = , PFAM = PF05617)' T '35.2' 'not assigned.unknown' 'niben101scf05250_281769-285276' ' no hits & (original description: Putative PGSC0003DMG400003399, Description = S-norcoclaurine synthase, PFAM = PF00407)' T '35.2' 'not assigned.unknown' 'niben101scf05262_56390-62213' '(at5g53330 : 151.0) Ubiquitin-associated/translation elongation factor EF1B protein; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative At5g53330, Description = Proline-rich cell wall protein-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05269_221224-224400' '(at1g34640 : 97.4) peptidases; FUNCTIONS IN: peptidase activity; INVOLVED IN: N-terminal protein myristoylation, signal peptide processing; LOCATED IN: endomembrane system, integral to membrane, signal peptidase complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Microsomal signal peptidase 12kDa subunit (InterPro:IPR009542); Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 194.8) & (original description: Putative Ccrd_026022, Description = Microsomal signal peptidase 12kDa subunit, PFAM = PF06645)' T '35.2' 'not assigned.unknown' 'niben101scf05269_266403-268768' '(gnl|cdd|36304 : 156.0) no description available & (at1g22270 : 132.0) Encodes SMO2 (Small Organ 2). Modulates progression of cell division during organ growth.; Trm112p-like protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF343 (InterPro:IPR005651); BEST Arabidopsis thaliana protein match is: Trm112p-like protein (TAIR:AT1G78190.1); Has 419 Blast hits to 419 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 151; Fungi - 129; Plants - 62; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative At1g78190, Description = Multifunctional methyltransferase subunit TRM112-like protein At1g78190, PFAM = PF03966)' T '35.2' 'not assigned.unknown' 'niben101scf05269_267542-276069' '(at1g34630 : 615.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (TAIR:AT5G51150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36612 : 104.0) no description available & (reliability: 1230.0) & (original description: Putative At1g34630, Description = At1g34630/F12K21.3, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05269_317149-320889' '(at3g53010 : 241.0) Domain of unknown function (DUF303) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF303, acetylesterase putative (InterPro:IPR005181); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF303) (TAIR:AT4G34215.2); Has 339 Blast hits to 339 proteins in 106 species: Archae - 2; Bacteria - 221; Metazoa - 0; Fungi - 1; Plants - 86; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative At4g34215, Description = Probable carbohydrate esterase At4g34215, PFAM = PF03629)' T '35.2' 'not assigned.unknown' 'niben101scf05270_298700-307056' '(at1g05730 : 161.0) Eukaryotic protein of unknown function (DUF842); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF842, eukaryotic (InterPro:IPR008560); BEST Arabidopsis thaliana protein match is: Eukaryotic protein of unknown function (DUF842) (TAIR:AT2G31725.1); Has 245 Blast hits to 245 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 169; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|86955 : 126.0) no description available & (gnl|cdd|38587 : 121.0) no description available & (reliability: 322.0) & (original description: Putative pco128617, Description = DUF842 domain protein, PFAM = PF05811)' T '35.2' 'not assigned.unknown' 'niben101scf05272_16952-20311' '(at5g11730 : 484.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G25970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86287 : 441.0) no description available & (reliability: 968.0) & (original description: Putative BnaC09g44850D, Description = BnaC09g44850D protein, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben101scf05276_18683-29649' '(at1g25520 : 312.0) Uncharacterized protein family (UPF0016); INVOLVED IN: response to karrikin; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0016 (InterPro:IPR001727); BEST Arabidopsis thaliana protein match is: Uncharacterized protein family (UPF0016) (TAIR:AT1G68650.1); Has 1806 Blast hits to 1733 proteins in 669 species: Archae - 27; Bacteria - 1021; Metazoa - 159; Fungi - 140; Plants - 210; Viruses - 0; Other Eukaryotes - 249 (source: NCBI BLink). & (gnl|cdd|38092 : 276.0) no description available & (gnl|cdd|32302 : 136.0) no description available & (reliability: 624.0) & (original description: Putative tparl, Description = Transmembrane protein 165, PFAM = PF01169;PF01169)' T '35.2' 'not assigned.unknown' 'niben101scf05279_171229-173585' ' no hits & (original description: Putative grp, Description = Glycine-rich RNA-binding protein, PFAM = PF00076)' T '35.2' 'not assigned.unknown' 'niben101scf05281_501-4357' ' no hits & (original description: Putative str246N, Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05286_38665-41105' ' no hits & (original description: Putative PGSC0003DMG400026167, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05290_99604-101822' ' no hits & (original description: Putative OEP7, Description = BnaA03g41780D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05294_1-6606' '(at3g15110 : 176.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3082 (InterPro:IPR021434); Has 77 Blast hits to 77 proteins in 38 species: Archae - 0; Bacteria - 37; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative At3g15110, Description = At3g15110, PFAM = PF11282)' T '35.2' 'not assigned.unknown' 'niben101scf05298_606823-610067' ' no hits & (original description: Putative At1g56220, Description = Dormancy-associated protein homolog 3, PFAM = PF05564)' T '35.2' 'not assigned.unknown' 'niben101scf05299_14150-19460' '(at1g67060 : 339.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 283 Blast hits to 281 proteins in 136 species: Archae - 0; Bacteria - 145; Metazoa - 0; Fungi - 65; Plants - 41; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 678.0) & (original description: Putative At1g67060, Description = AT1G67060 protein, PFAM = PF13398)' T '35.2' 'not assigned.unknown' 'niben101scf05299_19859-22671' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05300_1608-5340' '(at2g16460 : 150.0) Protein of unknown function (DUF1640); FUNCTIONS IN: metal ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1640 (InterPro:IPR012439); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1640) (TAIR:AT3G51090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38366 : 105.0) no description available & (gnl|cdd|71238 : 81.9) no description available & (reliability: 300.0) & (original description: Putative At2g16460, Description = FMP32-like protein, PFAM = PF07798)' T '35.2' 'not assigned.unknown' 'niben101scf05301_38837-58321' '(at4g03090 : 531.0) sequence-specific DNA binding;sequence-specific DNA binding transcription factors; FUNCTIONS IN: sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356). & (reliability: 1062.0) & (original description: Putative ndx1, Description = NDX1 homeobox protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05306_212130-216690' '(at5g18520 : 587.0) Lung seven transmembrane receptor family protein; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT3G09570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37780 : 561.0) no description available & (gnl|cdd|87161 : 152.0) no description available & (reliability: 1174.0) & (original description: Putative tmr1, Description = Putative transmembrane receptor, PFAM = PF06814)' T '35.2' 'not assigned.unknown' 'niben101scf05306_303444-307004' '(at5g02710 : 180.0) unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0153 (InterPro:IPR005358); Has 240 Blast hits to 240 proteins in 73 species: Archae - 10; Bacteria - 110; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative O77CONTIG1_01134, Description = Flagellin N-methylase, PFAM = PF03692)' T '35.2' 'not assigned.unknown' 'niben101scf05306_497586-502150' ' no hits & (original description: Putative PGSC0003DMG400011051, Description = BnaA04g21320D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05310_56849-62037' '(at2g01080 : 183.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT2G27080.2); Has 675 Blast hits to 674 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 673; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 84.6) no description available & (reliability: 366.0) & (original description: Putative Os03g0262700, Description = Harpin-induced protein 1 containing protein, expressed, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'niben101scf05310_433345-435882' ' no hits & (original description: Putative KCS, Description = GNS1/SUR4 membrane protein, PFAM = PF01151)' T '35.2' 'not assigned.unknown' 'niben101scf05311_57808-73845' '(at1g80060 : 121.0) Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G32270.1); Has 129 Blast hits to 129 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative At4g32270, Description = U11/U12 small nuclear ribonucleoprotein 25 kDa protein, PFAM = PF00240)' T '35.2' 'not assigned.unknown' 'niben101scf05314_17884-37412' '(at3g19190 : 1103.0) Encodes autophagy-related 2 (ATG2).; AUTOPHAGY 2 (ATG2); CONTAINS InterPro DOMAIN/s: autophagy-related, C-terminal (InterPro:IPR015412); Has 828 Blast hits to 713 proteins in 221 species: Archae - 0; Bacteria - 44; Metazoa - 384; Fungi - 228; Plants - 88; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (gnl|cdd|38204 : 354.0) no description available & (gnl|cdd|72748 : 83.7) no description available & (reliability: 2206.0) & (original description: Putative ATG2, Description = Autophagy-related protein 2, PFAM = PF09333;PF13329;PF12624)' T '35.2' 'not assigned.unknown' 'niben101scf05314_39049-42183' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05319_350516-354381' '(at3g06150 : 754.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19060.1); Has 61 Blast hits to 59 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1508.0) & (original description: Putative BnaA05g31120D, Description = BnaA05g31120D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05319_404918-429486' '(at5g19070 : 303.0) SNARE associated Golgi protein family; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT1G03260.1); Has 4755 Blast hits to 4755 proteins in 1226 species: Archae - 31; Bacteria - 3179; Metazoa - 263; Fungi - 112; Plants - 295; Viruses - 0; Other Eukaryotes - 875 (source: NCBI BLink). & (gnl|cdd|87885 : 112.0) no description available & (reliability: 606.0) & (original description: Putative At5g19070, Description = At5g19070, PFAM = PF09335)' T '35.2' 'not assigned.unknown' 'niben101scf05319_430318-432779' '(at3g06145 : 155.0) unknown protein; Has 15 Blast hits to 15 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05321_426135-428990' ' no hits & (original description: Putative F383_11871, Description = Putative helicase MOV-10, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05323_294203-297914' '(at3g26350 : 171.0) LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13050.1); Has 3534 Blast hits to 2704 proteins in 342 species: Archae - 6; Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162; Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink). & (gnl|cdd|70773 : 104.0) no description available & (reliability: 342.0) & (original description: Putative BnaC02g36050D, Description = BnaC02g36050D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05324_145670-157590' ' no hits & (original description: Putative WDL7, Description = TPX2 (Targeting protein for Xklp2) family protein, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'niben101scf05325_12062-23191' ' no hits & (original description: Putative PGSC0003DMG400040160, Description = C2H2 type zf-zinc-finger protein, PFAM = PF12874;PF12874)' T '35.2' 'not assigned.unknown' 'niben101scf05329_518072-527684' '(at2g40435 : 112.0) BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative Sb01g035970, Description = Putative uncharacterized protein Sb01g035970, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05329_733558-735980' ' no hits & (original description: Putative TCM_045421, Description = Hypoxia-responsive family protein, PFAM = PF04588)' T '35.2' 'not assigned.unknown' 'niben101scf05330_31095-34356' '(at1g10380 : 162.0) Putative membrane lipoprotein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 280 Blast hits to 279 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 280; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative F383_06079, Description = Wall-associated receptor kinase-like 20, PFAM = PF14380;PF13947)' T '35.2' 'not assigned.unknown' 'niben101scf05330_31449-33973' '(at1g10380 : 96.7) Putative membrane lipoprotein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 280 Blast hits to 279 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 280; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative , Description = Wall-associated receptor kinase-like 20, PFAM = PF14380)' T '35.2' 'not assigned.unknown' 'niben101scf05330_242004-246166' '(at5g61040 : 91.3) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative PGSC0003DMG400028369, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05330_308705-314867' '(gnl|cdd|71335 : 204.0) no description available & (at3g29575 : 127.0) ABI five binding protein 3 (AFP3); FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1675 (InterPro:IPR012463); BEST Arabidopsis thaliana protein match is: ABI five binding protein (TAIR:AT1G69260.1); Has 196 Blast hits to 190 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 4; Plants - 184; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative AFP2, Description = Ninja-family protein AFP2, PFAM = PF16136;PF07897;PF16135)' T '35.2' 'not assigned.unknown' 'niben101scf05332_5400-7732' '(at1g20430 : 100.0) unknown protein; Has 29 Blast hits to 29 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative PGSC0003DMG400009966, Description = F5M15.23, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05336_248388-262141' '(at4g02030 : 903.0) Vps51/Vps67 family (components of vesicular transport) protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps51/Vps67 (InterPro:IPR014812). & (gnl|cdd|37557 : 295.0) no description available & (reliability: 1806.0) & (original description: Putative cl754_1a, Description = Putative vacuolar protein sorting-associated protein 51-like, PFAM = PF08700)' T '35.2' 'not assigned.unknown' 'niben101scf05340_92233-94877' ' no hits & (original description: Putative PGSC0003DMG400037923, Description = Putative uncharacterized protein Sb01g049930, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05341_463-13806' '(at5g40740 : 862.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1724.0) & (original description: Putative 38930, Description = AUGMIN subunit 6, PFAM = PF14661)' T '35.2' 'not assigned.unknown' 'niben101scf05341_256714-259061' ' no hits & (original description: Putative PGPS/D11, Description = PGPS/D11, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05341_347955-350536' '(at5g40690 : 100.0) CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative At5g40690, Description = At5g40690, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05341_413218-422661' ' no hits & (original description: Putative , Description = , PFAM = PF17035)' T '35.2' 'not assigned.unknown' 'niben101scf05349_72916-76206' '(at1g16840 : 97.1) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05349_130282-159540' '(at1g78895 : 179.0) Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT1G16825.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative RTNLB22, Description = Reticulon family protein, PFAM = PF02453)' T '35.2' 'not assigned.unknown' 'niben101scf05350_23922-26821' '(at1g33800 : 358.0) Protein of unknown function (DUF579); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF579 (InterPro:IPR021148), Conserved hypothetical protein CHP01627 (InterPro:IPR006514); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF579) (TAIR:AT4G09990.1); Has 252 Blast hits to 251 proteins in 20 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 240; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|68247 : 351.0) no description available & (reliability: 716.0) & (original description: Putative GXM2, Description = Glucuronoxylan 4-O-methyltransferase 2, PFAM = PF04669)' T '35.2' 'not assigned.unknown' 'niben101scf05351_35335-39620' ' (original description: Putative POLR2A, Description = DNA-directed RNA polymerase subunit, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05354_8116-10715' '(at2g17940 : 86.3) Plant protein of unknown function (DUF827); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT3G51220.1); Has 80 Blast hits to 72 proteins in 20 species: Archae - 0; Bacteria - 6; Metazoa - 12; Fungi - 6; Plants - 48; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative MTR_3g113810, Description = WEB family plant protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05363_325231-327995' ' no hits & (original description: Putative NAC8, Description = NAC transcription factor, PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'niben101scf05368_278487-284434' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05368_294301-297333' '(at5g02160 : 118.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative At5g02160, Description = AT5g02160, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05370_105367-107856' ' no hits & (original description: Putative GDU5, Description = Protein GLUTAMINE DUMPER 5, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05371_637653-640273' ' no hits & (original description: Putative PGSC0003DMG400010820, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05374_124783-128058' '(at5g47680 : 257.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA (guanine-N1-)-methyltransferase (InterPro:IPR016009), tRNA (guanine-N(1)-)-methyltransferase, metazoa (InterPro:IPR016653), tRNA (guanine-N1-)-methyltransferase, eukaryotic (InterPro:IPR007356); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38178 : 167.0) no description available & (gnl|cdd|85644 : 88.5) no description available & (reliability: 514.0) & (original description: Putative TRMT10A, Description = TRNA (Guanine-N1-)-methyltransferase, PFAM = PF01746)' T '35.2' 'not assigned.unknown' 'niben101scf05374_124795-130663' '(at5g47680 : 296.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA (guanine-N1-)-methyltransferase (InterPro:IPR016009), tRNA (guanine-N(1)-)-methyltransferase, metazoa (InterPro:IPR016653), tRNA (guanine-N1-)-methyltransferase, eukaryotic (InterPro:IPR007356); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38178 : 205.0) no description available & (gnl|cdd|85644 : 118.0) no description available & (reliability: 592.0) & (original description: Putative At5g47680, Description = At5g47680, PFAM = PF01746)' T '35.2' 'not assigned.unknown' 'niben101scf05374_347349-388692' '(at5g65180 : 234.0) ENTH/VHS family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT5G10060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37880 : 186.0) no description available & (gnl|cdd|48659 : 117.0) no description available & (reliability: 468.0) & (original description: Putative BnaA09g01820D, Description = BnaA09g01820D protein, PFAM = PF04818)' T '35.2' 'not assigned.unknown' 'niben101scf05375_54670-57237' ' no hits & (original description: Putative D6, Description = Thionin-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05378_337054-338699' '(at5g10695 : 81.3) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages. & (reliability: 162.6) & (original description: Putative TCM_036826, Description = Methionyl-tRNA synthetase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05381_64683-67127' ' no hits & (original description: Putative , Description = , PFAM = PF01419)' T '35.2' 'not assigned.unknown' 'niben101scf05381_310541-314011' '(at3g22970 : 306.0) Protein of unknown function (DUF506) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT4G14620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68298 : 225.0) no description available & (reliability: 612.0) & (original description: Putative glysoja_028213, Description = Bifunctional DNA-directed RNA polymerase subunit beta-beta, PFAM = PF04720)' T '35.2' 'not assigned.unknown' 'niben101scf05382_203313-206119' ' no hits & (original description: Putative PSK3, Description = Putative phytosulfokines 6, PFAM = PF06404)' T '35.2' 'not assigned.unknown' 'niben101scf05382_262971-265918' ' no hits & (original description: Putative At4g08680, Description = Putative MuDR-A-like transposon protein, PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'niben101scf05382_308578-318612' '(at2g27830 : 137.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits to 131 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05385_423127-426210' ' no hits & (original description: Putative bdn1, Description = Dehydrin, PFAM = PF00257;PF00257)' T '35.2' 'not assigned.unknown' 'niben101scf05387_787976-1091321' '(at5g44450 : 406.0) methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF858, methyltransferase-like (InterPro:IPR008576); Has 501 Blast hits to 497 proteins in 206 species: Archae - 0; Bacteria - 15; Metazoa - 174; Fungi - 136; Plants - 83; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (gnl|cdd|86973 : 324.0) no description available & (gnl|cdd|38388 : 177.0) no description available & (reliability: 812.0) & (original description: Putative Ntmt, Description = Alpha N-terminal protein methyltransferase 1, PFAM = PF05891)' T '35.2' 'not assigned.unknown' 'niben101scf05391_128064-130444' '(at1g28540 : 93.2) unknown protein; Has 25 Blast hits to 25 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative Sb10g020430, Description = Putative uncharacterized protein Sb10g020430, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05391_156291-164931' '(q8lhp0|elof1_orysa : 108.0) Transcription elongation factor 1 homolog - Oryza sativa (Rice) & (at5g46030 : 98.6) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF701, zinc-binding putative (InterPro:IPR007808); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38424 : 90.1) no description available & (reliability: 197.2) & (original description: Putative Os07g0631100, Description = Transcription elongation factor 1 homolog, PFAM = PF05129)' T '35.2' 'not assigned.unknown' 'niben101scf05391_181901-196012' '(at1g28510 : 162.0) Optic atrophy 3 protein (OPA3); CONTAINS InterPro DOMAIN/s: Optic atrophy 3-like (InterPro:IPR010754); BEST Arabidopsis thaliana protein match is: Optic atrophy 3 protein (OPA3) (TAIR:AT3G58150.1); Has 397 Blast hits to 393 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 155; Fungi - 114; Plants - 80; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|70509 : 148.0) no description available & (gnl|cdd|38545 : 133.0) no description available & (reliability: 324.0) & (original description: Putative Sb03g034830, Description = Putative uncharacterized protein Sb03g034830, PFAM = PF07047)' T '35.2' 'not assigned.unknown' 'niben101scf05391_401627-404226' '(at5g46090 : 266.0) Protein of unknown function (DUF679); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF679 (InterPro:IPR007770); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF679) (TAIR:AT4G18425.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68643 : 222.0) no description available & (reliability: 532.0) & (original description: Putative BnaA08g08770D, Description = BnaA08g08770D protein, PFAM = PF05078)' T '35.2' 'not assigned.unknown' 'niben101scf05392_19327-21776' '(at3g10020 : 105.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative T22K18.16, Description = AT3g10020/T22K18_16, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05395_88508-114426' '(at4g31880 : 265.0) LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1). & (gnl|cdd|36738 : 144.0) no description available & (reliability: 530.0) & (original description: Putative TCM_036919, Description = Nucleic acid binding protein, putative isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05395_293785-299583' '(at1g20830 : 286.0) Encodes MCD1 (MULTIPLE CHLOROPLAST DIVISION SITE 1). Determines the site of chloroplast division in concert with MinD (AT5G24020).; MULTIPLE CHLOROPLAST DIVISION SITE 1 (MCD1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chloroplast fission; LOCATED IN: chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 38 Blast hits to 38 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 572.0) & (original description: Putative MCD1, Description = Protein MULTIPLE CHLOROPLAST DIVISION SITE 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05395_312656-324153' ' no hits & (original description: Putative PGSC0003DMG400029407, Description = Localized to the inner membrane of the chloroplast, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05399_174693-177412' '(at5g13090 : 111.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05399_180178-183119' '(at1g27990 : 315.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits to 86 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 630.0) & (original description: Putative Sb06g013760, Description = Putative uncharacterized protein Sb06g013760, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05399_235673-240432' '(at5g13100 : 442.0) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 884.0) & (original description: Putative , Description = Glucose-6-phosphate 1-dehydrogenase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05402_51733-53936' '(at1g52855 : 93.2) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15534.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05404_373482-375982' ' no hits & (original description: Putative , Description = , PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'niben101scf05405_620844-628677' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05405_744930-747499' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Putative reverse transcriptase family member, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05412_53771-60128' '(at2g40070 : 120.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1); Has 108635 Blast hits to 60786 proteins in 2176 species: Archae - 287; Bacteria - 15142; Metazoa - 39415; Fungi - 26849; Plants - 4416; Viruses - 2864; Other Eukaryotes - 19662 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative , Description = ATP-binding protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05412_124474-129715' '(at2g40060 : 150.0) Clathrin light chain protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin light chain (InterPro:IPR000996); BEST Arabidopsis thaliana protein match is: Clathrin light chain protein (TAIR:AT3G51890.1); Has 548 Blast hits to 536 proteins in 149 species: Archae - 2; Bacteria - 80; Metazoa - 210; Fungi - 41; Plants - 105; Viruses - 2; Other Eukaryotes - 108 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative CLC1, Description = Clathrin light chain protein, PFAM = PF01086)' T '35.2' 'not assigned.unknown' 'niben101scf05413_16191-19306' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05413_183047-189154' '(at5g54540 : 112.0) Uncharacterised conserved protein (UCP012943); CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP012943 (InterPro:IPR016606); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative MTR_4g081550, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05414_301199-311057' '(at1g69210 : 256.0) Uncharacterised protein family UPF0090; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0090 (InterPro:IPR003728); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family UPF0090 (TAIR:AT1G77122.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 512.0) & (original description: Putative MTR_5g045020, Description = DUF150 family protein, PFAM = PF02576)' T '35.2' 'not assigned.unknown' 'niben101scf05416_47346-55338' '(at1g13770 : 510.0) ROOT UV-B SENSITIVE 3 (RUS3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT3G45890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68458 : 371.0) no description available & (gnl|cdd|39450 : 231.0) no description available & (reliability: 1020.0) & (original description: Putative RUS3, Description = Protein root UVB sensitive 3, PFAM = PF04884)' T '35.2' 'not assigned.unknown' 'niben101scf05417_32823-40270' '(at1g10190 : 233.0) Protein of Unknown Function (DUF239); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT4G15050.1); Has 640 Blast hits to 606 proteins in 22 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 4; Plants - 629; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66735 : 152.0) no description available & (reliability: 466.0) & (original description: Putative , Description = , PFAM = PF03080;PF14365)' T '35.2' 'not assigned.unknown' 'niben101scf05417_157170-159754' ' (original description: Putative grip22, Description = Ripening related protein family, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05417_271065-273732' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05430_69224-72375' '(gnl|cdd|69171 : 507.0) no description available & (at1g18740 : 485.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT1G74450.1); Has 167 Blast hits to 164 proteins in 20 species: Archae - 3; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 970.0) & (original description: Putative BnaC05g50160D, Description = BnaC05g50160D protein, PFAM = PF05633)' T '35.2' 'not assigned.unknown' 'niben101scf05430_223163-227417' '(at2g31840 : 304.0) Thioredoxin superfamily protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28590.1); Has 792 Blast hits to 656 proteins in 115 species: Archae - 0; Bacteria - 18; Metazoa - 243; Fungi - 77; Plants - 88; Viruses - 24; Other Eukaryotes - 342 (source: NCBI BLink). & (reliability: 608.0) & (original description: Putative Sb09g020470, Description = Putative uncharacterized protein Sb09g020470, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05431_176457-179620' '(at1g10150 : 320.0) Carbohydrate-binding protein; FUNCTIONS IN: carbohydrate binding; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Carbohydrate-binding protein (TAIR:AT1G59510.1); Has 114 Blast hits to 112 proteins in 22 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 110; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 640.0) & (original description: Putative PP2A10, Description = Protein PHLOEM PROTEIN 2-LIKE A10, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05434_126373-132254' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05434_126483-132506' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05437_144931-147861' ' no hits & (original description: Putative TCM_012230, Description = Mediator of RNA polymerase II transcription subunit 13, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05437_375600-378559' '(gnl|cdd|69434 : 307.0) no description available & (at4g12690 : 241.0) Plant protein of unknown function (DUF868); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT2G04220.1). & (reliability: 482.0) & (original description: Putative BnaA07g04720D, Description = BnaA07g04720D protein, PFAM = PF05910)' T '35.2' 'not assigned.unknown' 'niben101scf05437_378917-386379' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05438_39308-51049' ' (original description: Putative TCM_016382, Description = Acyl-coenzyme A:6-aminopenicillanic-acid-acyltransferase 29 kDa subunit, PFAM = PF03417)' T '35.2' 'not assigned.unknown' 'niben101scf05438_159609-173022' '(at1g64050 : 174.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 348.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05438_599086-602614' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05438_651226-653645' ' no hits & (original description: Putative PGSC0003DMG400043522, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05438_655107-663959' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf05440_196937-201493' '(at4g03420 : 406.0) Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G03610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69161 : 398.0) no description available & (reliability: 812.0) & (original description: Putative F9H3.4, Description = Putative uncharacterized protein AT4g03420, PFAM = PF05623)' T '35.2' 'not assigned.unknown' 'niben101scf05449_353692-357305' '(at4g29660 : 131.0) EMBRYO DEFECTIVE 2752 (EMB2752); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative EMB2752, Description = Uncharacterized protein At4g29660, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05463_172004-174336' '(at1g20430 : 100.0) unknown protein; Has 29 Blast hits to 29 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative PGSC0003DMG400029324, Description = F5M15.23, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05467_330276-333384' '(at2g30900 : 222.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 43 (TBL43); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 42 (TAIR:AT1G78710.1); Has 1340 Blast hits to 1315 proteins in 29 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 1338; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 138.0) no description available & (reliability: 444.0) & (original description: Putative gal2, Description = Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein, PFAM = PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf05467_454586-464957' '(at2g30900 : 325.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 43 (TBL43); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 42 (TAIR:AT1G78710.1); Has 1340 Blast hits to 1315 proteins in 29 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 1338; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 141.0) no description available & (reliability: 650.0) & (original description: Putative gal2, Description = Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf05468_204000-216257' '(at3g59780 : 466.0) Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: calcium sensing receptor (TAIR:AT5G23060.1); Has 1153 Blast hits to 413 proteins in 144 species: Archae - 0; Bacteria - 338; Metazoa - 73; Fungi - 101; Plants - 75; Viruses - 6; Other Eukaryotes - 560 (source: NCBI BLink). & (reliability: 932.0) & (original description: Putative glysoja_025196, Description = Rhodanese/cell cycle control phosphatase superfamily protein, PFAM = PF00581)' T '35.2' 'not assigned.unknown' 'niben101scf05468_245140-279411' '(q75ld5|dmi1l_orysa : 857.0) Probable ion channel DMI1-like, chloroplast precursor - Oryza sativa (Rice) & (at5g49960 : 697.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1012 (InterPro:IPR010420); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1012) (TAIR:AT5G02940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1394.0) & (original description: Putative DMI, Description = DMI1, PFAM = PF06241)' T '35.2' 'not assigned.unknown' 'niben101scf05468_425723-459983' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05469_182264-184299' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05469_329520-332083' '(gnl|cdd|68427 : 233.0) no description available & (at2g42610 : 227.0) LIGHT SENSITIVE HYPOCOTYLS 10 (LSH10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT1G07090.1); Has 309 Blast hits to 309 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative ELE, Description = Protein ELONGATED EMPTY GLUME, PFAM = PF04852)' T '35.2' 'not assigned.unknown' 'niben101scf05474_25368-28250' ' no hits & (original description: Putative , Description = Zinc finger containing preotein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05475_138164-172542' '(at4g38120 : 719.0) ARM repeat superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39735 : 211.0) no description available & (reliability: 1438.0) & (original description: Putative At4g38120, Description = Putative HEAT repeat-containing protein 6-like, PFAM = PF13251)' T '35.2' 'not assigned.unknown' 'niben101scf05481_49068-52137' ' no hits & (original description: Putative PGSC0003DMG400018773, Description = LEA-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05483_120489-123303' ' no hits & (original description: Putative PGSC0003DMG400042622, Description = Putative B3 domain-containing protein-like, PFAM = PF02362)' T '35.2' 'not assigned.unknown' 'niben101scf05483_322000-324350' ' no hits & (original description: Putative At5g19875, Description = At5g19875, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05483_457254-459505' ' no hits & (original description: Putative PGSC0003DMG400028988, Description = BnaA05g11040D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05483_640830-644749' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05486_120589-132681' ' no hits & (original description: Putative , Description = , PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf05487_55333-57512' ' no hits & (original description: Putative rpmG, Description = 50S ribosomal protein L33, PFAM = PF00471)' T '35.2' 'not assigned.unknown' 'niben101scf05487_204261-210805' '(at4g19540 : 321.0) IND1(iron-sulfur protein required for NADH dehydrogenase)-like (INDL); LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ParA/MinD (InterPro:IPR019591); BEST Arabidopsis thaliana protein match is: ATP binding (TAIR:AT3G24430.1); Has 13193 Blast hits to 13164 proteins in 2587 species: Archae - 550; Bacteria - 7572; Metazoa - 442; Fungi - 431; Plants - 201; Viruses - 0; Other Eukaryotes - 3997 (source: NCBI BLink). & (gnl|cdd|38232 : 299.0) no description available & (gnl|cdd|83937 : 286.0) no description available & (reliability: 642.0) & (original description: Putative mrp, Description = Iron-sulfur cluster carrier protein, PFAM = PF10609)' T '35.2' 'not assigned.unknown' 'niben101scf05487_238586-241657' ' no hits & (original description: Putative H1C12, Description = Histone H1, PFAM = PF00538)' T '35.2' 'not assigned.unknown' 'niben101scf05491_4781-7617' ' no hits & (original description: Putative , Description = , PFAM = PF11250)' T '35.2' 'not assigned.unknown' 'niben101scf05491_401044-415074' '(at3g44510 : 223.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, root; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G08310.1). & (reliability: 446.0) & (original description: Putative TCM_041437, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05494_85712-88584' '(at1g49470 : 256.0) Family of unknown function (DUF716) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF716) (TAIR:AT1G55230.1); Has 395 Blast hits to 395 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 157; Fungi - 0; Plants - 236; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68394 : 97.6) no description available & (reliability: 512.0) & (original description: Putative BnaA08g02670D, Description = BnaA08g02670D protein, PFAM = PF04819)' T '35.2' 'not assigned.unknown' 'niben101scf05494_203935-206384' ' no hits & (original description: Putative , Description = Putative membrane-associated kinase regulator 1-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05494_218383-224938' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05499_9264-15207' '(at2g45900 : 109.0) Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related; BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT3G61380.1); Has 396 Blast hits to 374 proteins in 94 species: Archae - 0; Bacteria - 31; Metazoa - 55; Fungi - 42; Plants - 167; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative , Description = , PFAM = PF14309;PF12552)' T '35.2' 'not assigned.unknown' 'niben101scf05506_40653-49873' ' no hits & (original description: Putative , Description = , PFAM = PF03226)' T '35.2' 'not assigned.unknown' 'niben101scf05506_64101-66779' ' no hits & (original description: Putative PGSC0003DMG400004157, Description = Protein yippee-like, PFAM = PF03226)' T '35.2' 'not assigned.unknown' 'niben101scf05506_228036-231165' ' no hits & (original description: Putative , Description = , PFAM = PF03226)' T '35.2' 'not assigned.unknown' 'niben101scf05506_245735-250754' '(at2g28780 : 739.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF939, bacterial (InterPro:IPR010343); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09450.1); Has 671 Blast hits to 667 proteins in 305 species: Archae - 0; Bacteria - 588; Metazoa - 0; Fungi - 2; Plants - 66; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 1478.0) & (original description: Putative BnaC04g15380D, Description = BnaC04g15380D protein, PFAM = PF13515)' T '35.2' 'not assigned.unknown' 'niben101scf05516_159730-164080' '(at1g04030 : 140.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44040.1); Has 1835 Blast hits to 1511 proteins in 238 species: Archae - 7; Bacteria - 164; Metazoa - 377; Fungi - 135; Plants - 187; Viruses - 22; Other Eukaryotes - 943 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative ATBARD1, Description = BnaA09g50720D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05516_288483-295247' '(at1g10385 : 175.0) Vps51/Vps67 family (components of vesicular transport) protein; CONTAINS InterPro DOMAIN/s: Vps51/Vps67 (InterPro:IPR014812); BEST Arabidopsis thaliana protein match is: exocyst complex component 84B (TAIR:AT5G49830.1); Has 436 Blast hits to 368 proteins in 139 species: Archae - 0; Bacteria - 32; Metazoa - 153; Fungi - 106; Plants - 134; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|37426 : 101.0) no description available & (reliability: 350.0) & (original description: Putative , Description = , PFAM = PF08700;PF16528)' T '35.2' 'not assigned.unknown' 'niben101scf05516_349402-352807' ' no hits & (original description: Putative , Description = , PFAM = PF00646;PF08268)' T '35.2' 'not assigned.unknown' 'niben101scf05523_53090-89798' '(at1g06590 : 1018.0) unknown protein; Has 380 Blast hits to 268 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 245; Fungi - 73; Plants - 49; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|39523 : 212.0) no description available & (reliability: 2036.0) & (original description: Putative APC5, Description = Anaphase-promoting complex subunit 5, PFAM = PF12862)' T '35.2' 'not assigned.unknown' 'niben101scf05529_4992-7705' ' no hits & (original description: Putative , Description = Mutant gag-pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05534_113885-119143' '(at4g09580 : 387.0) SNARE associated Golgi protein family; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT1G71940.1); Has 2802 Blast hits to 2802 proteins in 773 species: Archae - 6; Bacteria - 1625; Metazoa - 227; Fungi - 38; Plants - 230; Viruses - 0; Other Eukaryotes - 676 (source: NCBI BLink). & (gnl|cdd|38350 : 243.0) no description available & (reliability: 774.0) & (original description: Putative gtk16, Description = Gtk16 protein, PFAM = PF09335)' T '35.2' 'not assigned.unknown' 'niben101scf05535_435425-443897' '(at3g10250 : 293.0) Plant protein 1589 of unknown function; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476); BEST Arabidopsis thaliana protein match is: Plant protein 1589 of unknown function (TAIR:AT5G04090.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|88257 : 93.4) no description available & (reliability: 586.0) & (original description: Putative F383_00486, Description = Histidine--tRNA ligase, PFAM = PF09713)' T '35.2' 'not assigned.unknown' 'niben101scf05540_37039-42520' '(at5g01620 : 499.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 35 (TBL35); LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 34 (TAIR:AT2G38320.1). & (gnl|cdd|72785 : 138.0) no description available & (reliability: 998.0) & (original description: Putative TBL35, Description = Protein trichome birefringence-like 35, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf05540_102669-107199' '(at2g38320 : 435.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 34 (TBL34); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 35 (TAIR:AT5G01620.2); Has 1346 Blast hits to 1317 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 1344; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|72785 : 179.0) no description available & (reliability: 870.0) & (original description: Putative ESK1, Description = PC-Esterase, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf05542_18790-21683' '(gnl|cdd|68247 : 348.0) no description available & (at1g09610 : 330.0) Protein of unknown function (DUF579); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF579 (InterPro:IPR021148), Conserved hypothetical protein CHP01627 (InterPro:IPR006514); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF579) (TAIR:AT4G09990.1); Has 252 Blast hits to 251 proteins in 20 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 240; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 660.0) & (original description: Putative GXM1, Description = Glucuronoxylan 4-O-methyltransferase 1, PFAM = PF04669)' T '35.2' 'not assigned.unknown' 'niben101scf05542_21169-23508' '(at1g09610 : 396.0) Protein of unknown function (DUF579); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF579 (InterPro:IPR021148), Conserved hypothetical protein CHP01627 (InterPro:IPR006514); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF579) (TAIR:AT4G09990.1); Has 252 Blast hits to 251 proteins in 20 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 240; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|68247 : 360.0) no description available & (reliability: 792.0) & (original description: Putative GXM1, Description = Glucuronoxylan 4-O-methyltransferase 1, PFAM = PF04669)' T '35.2' 'not assigned.unknown' 'niben101scf05551_6142-9888' '(at5g62960 : 376.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 752.0) & (original description: Putative Os02g0130600, Description = Os02g0130600 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05551_431846-434679' ' no hits & (original description: Putative PGSC0003DMG400018146, Description = , PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'niben101scf05552_431950-436828' '(at5g62170 : 199.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G51850.1); Has 381 Blast hits to 359 proteins in 81 species: Archae - 0; Bacteria - 16; Metazoa - 101; Fungi - 21; Plants - 99; Viruses - 3; Other Eukaryotes - 141 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative F383_01476, Description = Anhydro-N-acetylmuramic acid kinase, PFAM = PF14309;PF14383)' T '35.2' 'not assigned.unknown' 'niben101scf05552_433660-436678' ' no hits & (original description: Putative , Description = Anhydro-N-acetylmuramic acid kinase, PFAM = PF14383)' T '35.2' 'not assigned.unknown' 'niben101scf05552_886727-890631' '(at5g51920 : 462.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22980.1); Has 991 Blast hits to 937 proteins in 281 species: Archae - 6; Bacteria - 292; Metazoa - 116; Fungi - 152; Plants - 275; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|37353 : 308.0) no description available & (reliability: 924.0) & (original description: Putative BnaA02g11150D, Description = BnaA02g11150D protein, PFAM = PF00266)' T '35.2' 'not assigned.unknown' 'niben101scf05553_24997-28205' '(at4g08940 : 459.0) Ubiquitin carboxyl-terminal hydrolase family protein; CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant (InterPro:IPR021099); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein (TAIR:AT4G01037.1); Has 405 Blast hits to 399 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 405; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 918.0) & (original description: Putative At4g08940, Description = At4g08940, PFAM = PF11955)' T '35.2' 'not assigned.unknown' 'niben101scf05554_266490-271906' ' no hits & (original description: Putative BnaC01g25020D, Description = BnaC01g25020D protein, PFAM = PF15938)' T '35.2' 'not assigned.unknown' 'niben101scf05554_332906-654617' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05554_357740-360784' '(at1g22030 : 314.0) CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G77855.1); Has 99 Blast hits to 99 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 628.0) & (original description: Putative F383_32784, Description = Monofunctional biosynthetic peptidoglycan transglycosylase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05559_306871-309692' '(at1g03170 : 89.4) Protein of unknown function (DUF3049); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) (TAIR:AT4G02810.1); Has 91 Blast hits to 91 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative glysoja_028362, Description = Protein FANTASTIC FOUR 3, PFAM = PF11250)' T '35.2' 'not assigned.unknown' 'niben101scf05565_108700-117797' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05576_11795-24536' '(at3g52240 : 127.0) unknown protein; Has 220 Blast hits to 193 proteins in 66 species: Archae - 0; Bacteria - 15; Metazoa - 53; Fungi - 33; Plants - 66; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative PGSC0003DMG400023487, Description = Putative micronuclear linker histone polyprotein-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05576_136197-145022' ' no hits & (original description: Putative PGSC0003DMG400023486, Description = E3 ubiquitin-protein ligase ATL59, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf05582_417662-421397' ' no hits & (original description: Putative glysoja_046371, Description = Transcription factor, putative, PFAM = PF13837)' T '35.2' 'not assigned.unknown' 'niben101scf05582_479165-481944' ' no hits & (original description: Putative GEG4, Description = GAST1 protein, PFAM = PF02704)' T '35.2' 'not assigned.unknown' 'niben101scf05584_218556-230274' '(at5g41761 : 89.4) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative BnaC03g10980D, Description = BnaC03g10980D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05587_30436-33895' '(at2g39170 : 147.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function NEP (InterPro:IPR019320); Has 57 Blast hits to 57 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|39723 : 130.0) no description available & (reliability: 294.0) & (original description: Putative Os08g0152500, Description = Os08g0152500 protein, PFAM = PF10167)' T '35.2' 'not assigned.unknown' 'niben101scf05587_37088-44066' '(at3g10405 : 186.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen development; LOCATED IN: chloroplast; Has 44 Blast hits to 44 proteins in 20 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative At3g10405, Description = At3g10405, PFAM = PF12646)' T '35.2' 'not assigned.unknown' 'niben101scf05588_407545-409955' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05592_17945-21656' '(at5g42330 : 97.4) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 194.8) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05596_152447-160718' '(gnl|cdd|70175 : 584.0) no description available & (at5g17620 : 525.0) CONTAINS InterPro DOMAIN/s: Plant nuclear matrix 1 (InterPro:IPR010604); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1050.0) & (original description: Putative 39295, Description = AUGMIN subunit 7, PFAM = PF06694)' T '35.2' 'not assigned.unknown' 'niben101scf05609_272153-275939' ' no hits & (original description: Putative , Description = , PFAM = PF08513)' T '35.2' 'not assigned.unknown' 'niben101scf05609_339035-341084' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05610_379945-385882' '(gnl|cdd|70188 : 264.0) no description available & (at5g65650 : 177.0) Protein of unknown function (DUF1195); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1195 (InterPro:IPR010608); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1195) (TAIR:AT4G36660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative BnaCnng53540D, Description = BnaCnng53540D protein, PFAM = PF06708)' T '35.2' 'not assigned.unknown' 'niben101scf05610_414708-417948' ' no hits & (original description: Putative GRF1, Description = Growth-regulating factor 1, PFAM = PF08880)' T '35.2' 'not assigned.unknown' 'niben101scf05618_202349-216790' '(at3g02220 : 199.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2039 (InterPro:IPR019351); Has 215 Blast hits to 215 proteins in 94 species: Archae - 2; Bacteria - 2; Metazoa - 125; Fungi - 4; Plants - 38; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|38451 : 156.0) no description available & (reliability: 398.0) & (original description: Putative Sb03g035330, Description = Putative uncharacterized protein Sb03g035330, PFAM = PF10217)' T '35.2' 'not assigned.unknown' 'niben101scf05620_427415-439553' '(at2g03800 : 410.0) encodes a D-aminoacyl-tRNA deacylase. Involved in detoxification of D-aminoacyl-tRNA. Mutants also show ethanol-hypersensitive phenotype.; GEKO1 (GEK1); CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP016210 (InterPro:IPR018033), D-aminoacyl-tRNA deacylase (InterPro:IPR007508); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86658 : 216.0) no description available & (reliability: 820.0) & (original description: Putative Os09g0248000, Description = Os09g0248000 protein, PFAM = PF04414)' T '35.2' 'not assigned.unknown' 'niben101scf05625_135127-139609' '(at3g22810 : 167.0) FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pleckstrin-like, plant (InterPro:IPR013666), Protein of unknown function DUF828 (InterPro:IPR008546), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region (TAIR:AT4G14740.2); Has 431 Blast hits to 261 proteins in 42 species: Archae - 3; Bacteria - 14; Metazoa - 18; Fungi - 2; Plants - 219; Viruses - 0; Other Eukaryotes - 175 (source: NCBI BLink). & (gnl|cdd|69238 : 141.0) no description available & (reliability: 334.0) & (original description: Putative Sb03g000810, Description = Putative uncharacterized protein Sb03g000810, PFAM = PF05703;PF08458)' T '35.2' 'not assigned.unknown' 'niben101scf05633_208704-212474' '(at1g21830 : 107.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G44608.1); Has 49 Blast hits to 49 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative , Description = , PFAM = PF05340)' T '35.2' 'not assigned.unknown' 'niben101scf05634_297618-301291' ' no hits & (original description: Putative bkr2, Description = 3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic, PFAM = PF00106)' T '35.2' 'not assigned.unknown' 'niben101scf05643_581905-584231' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05643_585223-588596' '(at3g53010 : 251.0) Domain of unknown function (DUF303) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF303, acetylesterase putative (InterPro:IPR005181); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF303) (TAIR:AT4G34215.2); Has 339 Blast hits to 339 proteins in 106 species: Archae - 2; Bacteria - 221; Metazoa - 0; Fungi - 1; Plants - 86; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (reliability: 502.0) & (original description: Putative At3g53010, Description = Receptor protein kinase-like protein, PFAM = PF03629)' T '35.2' 'not assigned.unknown' 'niben101scf05643_675199-678689' '(at4g34215 : 233.0) Encodes a member of the SGNH-hydrolase superfamily of enzymes. The enzymes of the SGNH-hydrolase superfamily facilitate the hydrolysis of ester, thioester and amide bonds in a range of substrates including complex polysaccharides, lysophospholipids, acyl-CoA esters and other compounds.; Domain of unknown function (DUF303) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF303, acetylesterase putative (InterPro:IPR005181); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF303) (TAIR:AT3G53010.1); Has 345 Blast hits to 345 proteins in 104 species: Archae - 2; Bacteria - 231; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative At3g53010, Description = Carbohydrate esterase plant-like protein, PFAM = PF03629)' T '35.2' 'not assigned.unknown' 'niben101scf05645_195695-378031' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf05645_267730-282720' '(at5g61450 : 504.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|81332 : 106.0) no description available & (reliability: 1008.0) & (original description: Putative At5g61450, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05645_375606-412752' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf05645_512138-515409' ' no hits & (original description: Putative PGSC0003DMG400044492, Description = Putative ovule protein, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben101scf05645_526206-534044' '(at3g47450 : 694.0) Encodes a protein with similarity to the bacterial YqeH GTPase required for proper ribosome assembly. In Arabidopsis, mutant analyses show that this protein regulates growth and hormonal signaling in plants. It also attenuates oxidative stress and reactive oxygen species (ROS). It also seems to be involved in regulating leaf senescence and cell death. This gene product is also involved in nitric oxide biosynthesis in response to ABA but not exogenous H2O2. This protein also appears to be required for proper plastid biogenesis. Levels of several plastid-localized proteins, including RBCL, ClpP1, and the MEP biosynthesis enzymes DXS and DXR are altered in rif1-1 mutants. This protein was originally characterized as a mitrochondrial-localized nitric oxide synthase, but, the synthase activity was later disproven. In addition, new studies with GFP fusion proteins and chloroplast import assays suggest that this protein is found in chloroplasts.; NO ASSOCIATED 1 (NOA1); FUNCTIONS IN: GTPase activity; INVOLVED IN: in 8 processes; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G57180.1); Has 1589 Blast hits to 1531 proteins in 754 species: Archae - 6; Bacteria - 1199; Metazoa - 159; Fungi - 35; Plants - 109; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (q6ypg5|nos_orysa : 672.0) Putative nitric-oxide synthase (EC 1.14.13.39) - Oryza sativa (Rice) & (gnl|cdd|36463 : 358.0) no description available & (gnl|cdd|57926 : 181.0) no description available & (reliability: 1388.0) & (original description: Putative NOA1, Description = NO-associated protein 1, chloroplastic/mitochondrial, PFAM = PF01926)' T '35.2' 'not assigned.unknown' 'niben101scf05645_561916-572583' ' no hits & (original description: Putative , Description = DIS3-like exonuclease 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05649_346561-370459' '(at5g23550 : 262.0) Got1/Sft2-like vescicle transport protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Got1/SFT2-like (InterPro:IPR007305), Vesicle transport protein, SFT2-like (InterPro:IPR011691); BEST Arabidopsis thaliana protein match is: Got1/Sft2-like vescicle transport protein family (TAIR:AT5G24170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38098 : 158.0) no description available & (gnl|cdd|71211 : 112.0) no description available & (reliability: 524.0) & (original description: Putative BnaA06g26270D, Description = BnaA06g26270D protein, PFAM = PF04178)' T '35.2' 'not assigned.unknown' 'niben101scf05649_742454-763756' '(at5g18420 : 513.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2363 (InterPro:IPR019312); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|39708 : 423.0) no description available & (reliability: 1026.0) & (original description: Putative cnot11, Description = CCR4-NOT transcription complex subunit 11, PFAM = PF10155)' T '35.2' 'not assigned.unknown' 'niben101scf05654_29074-31559' ' (original description: Putative orf162, Description = NADH dehydrogenase subunit 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05664_197891-203195' ' no hits & (original description: Putative , Description = , PFAM = PF00240)' T '35.2' 'not assigned.unknown' 'niben101scf05664_296261-301254' '(at5g25270 : 87.8) Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT5G42220.1); Has 11489 Blast hits to 5746 proteins in 742 species: Archae - 0; Bacteria - 401; Metazoa - 4954; Fungi - 1390; Plants - 2430; Viruses - 186; Other Eukaryotes - 2128 (source: NCBI BLink). & (gnl|cdd|29211 : 84.1) no description available & (reliability: 175.6) & (original description: Putative , Description = , PFAM = PF00240)' T '35.2' 'not assigned.unknown' 'niben101scf05665_60615-67832' ' no hits & (original description: Putative PGSC0003DMG400023486, Description = Putative uncharacterized protein Sb04g021520, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf05669_282086-289910' '(at1g42430 : 529.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55760.3). & (reliability: 1058.0) & (original description: Putative PHYPADRAFT_40110, Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05669_306973-311841' '(at1g76250 : 509.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 74 Blast hits to 74 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 1018.0) & (original description: Putative At1g76250, Description = BnaA07g21460D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05670_174426-177200' ' no hits & (original description: Putative orf119c, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05674_349524-355605' '(at2g23530 : 305.0) Zinc-finger domain of monoamine-oxidase A repressor R1; CONTAINS InterPro DOMAIN/s: Cell division cycle-associated protein (InterPro:IPR018866); BEST Arabidopsis thaliana protein match is: Zinc-finger domain of monoamine-oxidase A repressor R1 (TAIR:AT4G37110.1); Has 512 Blast hits to 506 proteins in 112 species: Archae - 0; Bacteria - 4; Metazoa - 144; Fungi - 73; Plants - 256; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 610.0) & (original description: Putative cdca7, Description = Cell division cycle-associated protein 7, PFAM = PF10497)' T '35.2' 'not assigned.unknown' 'niben101scf05675_99973-102336' ' no hits & (original description: Putative , Description = CTP-dependent diacylglycerol kinase 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05678_47775-51490' '(at5g15900 : 395.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 19 (TBL19); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 21 (TAIR:AT5G15890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|72785 : 122.0) no description available & (reliability: 790.0) & (original description: Putative TBL19, Description = Protein trichome birefringence-like 19, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf05682_32657-35920' ' no hits & (original description: Putative PGSC0003DMG400013576, Description = BnaC05g14900D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05688_909554-918361' '(at1g56180 : 492.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27290.1); Has 436 Blast hits to 436 proteins in 83 species: Archae - 0; Bacteria - 153; Metazoa - 0; Fungi - 0; Plants - 160; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (reliability: 984.0) & (original description: Putative F14G9.20, Description = At1g56180/F14G9_20, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05688_1244215-1265852' '(at1g54310 : 622.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: RNA binding; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine-dependent methyltransferase (InterPro:IPR019614), Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|31289 : 318.0) no description available & (reliability: 1244.0) & (original description: Putative CPLD16, Description = RNA methyl transferase-related protein, PFAM = PF10672)' T '35.2' 'not assigned.unknown' 'niben101scf05689_43239-46249' '(at5g25070 : 86.7) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative LOC100383143, Description = Os08g0516000 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05689_248633-251883' '(atmg01130 : 108.0) hypothetical protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages. & (reliability: 216.0) & (original description: Putative rps13, Description = Ribosomal protein S13, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05692_97592-100119' ' no hits & (original description: Putative TCM_030822, Description = LIM and calponin domains-containing protein 1, putative, PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben101scf05692_760577-766302' '(at3g20300 : 541.0) Protein of unknown function (DUF3537); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3537 (InterPro:IPR021924); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3537) (TAIR:AT1G50630.1); Has 143 Blast hits to 143 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 1082.0) & (original description: Putative MRB1, Description = Putative uncharacterized protein At4g22270, PFAM = PF12056)' T '35.2' 'not assigned.unknown' 'niben101scf05697_33053-37312' '(at4g28020 : 404.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0066 (InterPro:IPR001378); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38153 : 214.0) no description available & (gnl|cdd|31906 : 155.0) no description available & (reliability: 808.0) & (original description: Putative At4g28015, Description = At4g28020, PFAM = PF01980)' T '35.2' 'not assigned.unknown' 'niben101scf05697_311585-318486' ' no hits & (original description: Putative PGSC0003DMG402027350, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05697_712067-718254' '(at2g28600 : 241.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase family protein (TAIR:AT5G14610.2); Has 18076 Blast hits to 18074 proteins in 2559 species: Archae - 105; Bacteria - 11263; Metazoa - 1996; Fungi - 1558; Plants - 1139; Viruses - 1; Other Eukaryotes - 2014 (source: NCBI BLink). & (gnl|cdd|35560 : 159.0) no description available & (reliability: 482.0) & (original description: Putative ZOSMA_118G00420, Description = ATP-dependent RNA helicase, PFAM = PF00270)' T '35.2' 'not assigned.unknown' 'niben101scf05697_1162284-1164757' ' no hits & (original description: Putative At4g40045, Description = Putative uncharacterized protein At4g40045, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05697_1164965-1168586' '(gnl|cdd|86676 : 108.0) no description available & (at2g38640 : 95.9) Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT5G41590.1); Has 389 Blast hits to 388 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 1; Plants - 388; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative Sb05g001420, Description = Putative uncharacterized protein Sb05g001420, PFAM = PF04525)' T '35.2' 'not assigned.unknown' 'niben101scf05702_202028-205503' ' (original description: Putative PIF1, Description = ATP-dependent DNA helicase PIF1, PFAM = PF05970;PF05970)' T '35.2' 'not assigned.unknown' 'niben101scf05705_40191-44228' '(at4g26060 : 150.0) Ribosomal protein L18ae family; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57060.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative At5g57060, Description = Putative uncharacterized protein At5g57060, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05708_7314-9706' ' no hits & (original description: Putative PGSC0003DMG400019193, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05710_241251-243745' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf05710_280534-283439' ' no hits & (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05711_198943-203011' '(at3g58520 : 504.0) Ubiquitin carboxyl-terminal hydrolase family protein; CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant (InterPro:IPR021099); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein (TAIR:AT5G48040.1); Has 412 Blast hits to 406 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 412; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1008.0) & (original description: Putative TCM_025005, Description = Ubiquitin carboxyl-terminal hydrolase family protein, PFAM = PF11955)' T '35.2' 'not assigned.unknown' 'niben101scf05711_388445-393914' '(at2g41950 : 251.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 53 Blast hits to 53 proteins in 24 species: Archae - 0; Bacteria - 27; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 502.0) & (original description: Putative At2g41950, Description = At2g41950/T6D20.26, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05711_433834-444021' '(at3g58050 : 935.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41960.1); Has 13384 Blast hits to 8116 proteins in 546 species: Archae - 41; Bacteria - 766; Metazoa - 5596; Fungi - 1431; Plants - 589; Viruses - 46; Other Eukaryotes - 4915 (source: NCBI BLink). & (reliability: 1870.0) & (original description: Putative At2g41960, Description = Putative uncharacterized protein At2g41960, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05717_17119-24023' '(at2g40435 : 132.0) BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative Ccrd_018518, Description = Myc-type, basic helix-loop-helix (BHLH) domain-containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05717_196814-199431' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05717_359178-365494' '(at5g01970 : 242.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30050.1); Has 240 Blast hits to 236 proteins in 72 species: Archae - 0; Bacteria - 15; Metazoa - 51; Fungi - 19; Plants - 119; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (reliability: 484.0) & (original description: Putative Sb09g012510, Description = Putative uncharacterized protein Sb09g012510, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05720_124195-126593' '(at4g22000 : 133.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative F383_05329, Description = Protein-tyrosine sulfotransferase-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05721_99383-101888' ' (original description: Putative LgRT3, Description = Reverse transcriptases, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf05732_47827-58587' '(at3g59670 : 105.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37440.2); Has 77 Blast hits to 77 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05732_68347-71443' '(at2g26070 : 305.0) Encodes a predicted membrane protein. Similar sequences are widely distributed and conserved in plants, animals and protists but absent in fungi and prokaryotes. The sequence has no known motifs and no biological function has been assigned in any species. In Arabidopsis, it appears to be involved in the negative regulation of the response to ethylene, is localized to the Golgi and is a positive regulator of ETR1.; REVERSION-TO-ETHYLENE SENSITIVITY1 (RTE1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF778 (InterPro:IPR008496); BEST Arabidopsis thaliana protein match is: RTE1-homolog (TAIR:AT3G51040.3); Has 292 Blast hits to 292 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (gnl|cdd|69146 : 215.0) no description available & (gnl|cdd|38360 : 205.0) no description available & (reliability: 610.0) & (original description: Putative RTE1, Description = Green-ripe protein, PFAM = PF05608;PF05608)' T '35.2' 'not assigned.unknown' 'niben101scf05732_365840-370059' '(at5g24690 : 406.0) INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: reticulata-related 1 (TAIR:AT5G22790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 812.0) & (original description: Putative At5g24690, Description = AT5g24690/MXC17_8, PFAM = PF11891)' T '35.2' 'not assigned.unknown' 'niben101scf05732_371942-374287' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05732_373324-377007' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = PF13976)' T '35.2' 'not assigned.unknown' 'niben101scf05732_390112-406489' '(at1g71240 : 730.0) Plant protein of unknown function (DUF639); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF639 (InterPro:IPR006927); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF639) (TAIR:AT1G48840.1); Has 140 Blast hits to 137 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 140; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68417 : 518.0) no description available & (reliability: 1460.0) & (original description: Putative At1g71240, Description = Putative ovule protein, PFAM = PF04842)' T '35.2' 'not assigned.unknown' 'niben101scf05732_418903-420653' ' no hits & (original description: Putative MEE9, Description = Maternal effect embryo arrest 9, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05733_59719-66926' ' no hits & (original description: Putative PGSC0003DMG400016690, Description = E3 ubiquitin-protein ligase, PFAM = PF00505;PF10536;PF03145)' T '35.2' 'not assigned.unknown' 'niben101scf05745_31663-38790' '(at5g08540 : 322.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 644.0) & (original description: Putative F383_10175, Description = Ribosomal RNA small subunit methyltransferase J, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05747_8138-10980' '(at2g27260 : 122.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G52460.1); Has 868 Blast hits to 868 proteins in 31 species: Archae - 2; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 862; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|70773 : 115.0) no description available & (reliability: 244.0) & (original description: Putative BnaA04g15720D, Description = BnaA04g15720D protein, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'niben101scf05749_95667-107685' '(at1g49890 : 402.0) Family of unknown function (DUF566) ; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 (InterPro:IPR007573); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) (TAIR:AT3G19570.2); Has 9198 Blast hits to 4153 proteins in 422 species: Archae - 34; Bacteria - 1349; Metazoa - 2630; Fungi - 1436; Plants - 341; Viruses - 197; Other Eukaryotes - 3211 (source: NCBI BLink). & (gnl|cdd|68069 : 266.0) no description available & (reliability: 804.0) & (original description: Putative SCO3, Description = Protein SNOWY COTYLEDON 3, PFAM = PF04484)' T '35.2' 'not assigned.unknown' 'niben101scf05749_100626-106926' '(at1g49890 : 233.0) Family of unknown function (DUF566) ; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 (InterPro:IPR007573); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) (TAIR:AT3G19570.2); Has 9198 Blast hits to 4153 proteins in 422 species: Archae - 34; Bacteria - 1349; Metazoa - 2630; Fungi - 1436; Plants - 341; Viruses - 197; Other Eukaryotes - 3211 (source: NCBI BLink). & (gnl|cdd|68069 : 176.0) no description available & (reliability: 466.0) & (original description: Putative SCO3, Description = BnaA01g06370D protein, PFAM = PF04484;PF04484)' T '35.2' 'not assigned.unknown' 'niben101scf05749_170907-173993' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05749_213878-216963' ' no hits & (original description: Putative Dif54, Description = Extensin-like protein Dif54, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05749_232237-239880' '(at1g49870 : 405.0) unknown protein; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 810.0) & (original description: Putative PGSC0003DMG400025848, Description = Transport protein-related, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05749_252017-255161' '(at3g19550 : 82.4) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative , Description = , PFAM = PF03242)' T '35.2' 'not assigned.unknown' 'niben101scf05750_116610-134693' '(at3g48500 : 821.0) PIGMENT DEFECTIVE 312 (PDE312); LOCATED IN: plastid chromosome, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027); Has 95 Blast hits to 93 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 14; Plants - 42; Viruses - 14; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 1642.0) & (original description: Putative PTAC10, Description = Protein PLASTID TRANSCRIPTIONALLY ACTIVE 10, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05750_199800-202768' '(at5g50360 : 186.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05755_405659-412158' '(at3g24150 : 236.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32295.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 472.0) & (original description: Putative At3g24150, Description = Putative uncharacterized protein At3g24150, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05756_62357-65859' '(at5g12010 : 581.0) unknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39785 : 225.0) no description available & (reliability: 1162.0) & (original description: Putative At5g12010, Description = AT5g12010/F14F18_180, PFAM = PF13359)' T '35.2' 'not assigned.unknown' 'niben101scf05761_102095-109159' '(at1g74160 : 301.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G18620.1); Has 3407 Blast hits to 2217 proteins in 314 species: Archae - 0; Bacteria - 264; Metazoa - 1296; Fungi - 318; Plants - 346; Viruses - 34; Other Eukaryotes - 1149 (source: NCBI BLink). & (reliability: 602.0) & (original description: Putative PGSC0003DMG400001462, Description = , PFAM = PF14309)' T '35.2' 'not assigned.unknown' 'niben101scf05764_20611-23317' ' no hits & (original description: Putative dhn1, Description = Dehydrin, PFAM = PF00257)' T '35.2' 'not assigned.unknown' 'niben101scf05764_131752-147489' '(at4g36440 : 519.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 41 Blast hits to 41 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1038.0) & (original description: Putative BnaA01g01270D, Description = BnaA01g01270D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05767_89812-96861' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05767_322943-325653' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05767_736862-740258' ' no hits & (original description: Putative PGSC0003DMG400002009, Description = , PFAM = PF00011)' T '35.2' 'not assigned.unknown' 'niben101scf05776_43178-53735' '(at2g31740 : 779.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04610.1); Has 1970 Blast hits to 1936 proteins in 487 species: Archae - 34; Bacteria - 737; Metazoa - 349; Fungi - 54; Plants - 234; Viruses - 0; Other Eukaryotes - 562 (source: NCBI BLink). & (gnl|cdd|37563 : 194.0) no description available & (reliability: 1558.0) & (original description: Putative At2g31740, Description = Putative uncharacterized protein At2g31740, PFAM = PF08241;PF01564)' T '35.2' 'not assigned.unknown' 'niben101scf05776_347348-361412' '(at3g23910 : 265.0) BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family protein (TAIR:AT3G24255.2); Has 562 Blast hits to 532 proteins in 147 species: Archae - 28; Bacteria - 51; Metazoa - 157; Fungi - 82; Plants - 85; Viruses - 6; Other Eukaryotes - 153 (source: NCBI BLink). & (reliability: 530.0) & (original description: Putative At3g23910, Description = HAPp48,5 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05776_349720-355110' '(at3g24255 : 146.0) RNA-directed DNA polymerase (reverse transcriptase)-related family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23910.1); Has 169 Blast hits to 169 proteins in 55 species: Archae - 8; Bacteria - 18; Metazoa - 36; Fungi - 11; Plants - 53; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative , Description = Uncharacterized protein isoform 6, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05787_226411-231550' '(at2g30900 : 364.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 43 (TBL43); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 42 (TAIR:AT1G78710.1); Has 1340 Blast hits to 1315 proteins in 29 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 1338; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 167.0) no description available & (reliability: 728.0) & (original description: Putative gal2, Description = Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf05798_2410-5407' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05799_162148-168376' '(at5g42660 : 612.0) Protein of unknown function (DUF616); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF616 (InterPro:IPR006852); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF616) (TAIR:AT2G02910.1); Has 345 Blast hits to 345 proteins in 43 species: Archae - 14; Bacteria - 50; Metazoa - 0; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|68342 : 399.0) no description available & (reliability: 1224.0) & (original description: Putative At5g42660, Description = AT5g42660/MJB21_3, PFAM = PF04765)' T '35.2' 'not assigned.unknown' 'niben101scf05799_239016-241807' ' no hits & (original description: Putative , Description = OSJNBb0067G11.4 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05800_234665-250938' '(at4g31880 : 286.0) LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1). & (gnl|cdd|36738 : 156.0) no description available & (reliability: 572.0) & (original description: Putative At4g31880, Description = Putative uncharacterized protein At4g31880, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05801_1-1781' ' (original description: Putative pra1, Description = PRA1 family protein F2, PFAM = PF03208)' T '35.2' 'not assigned.unknown' 'niben101scf05804_5269-7885' ' no hits & (original description: Putative , Description = , PFAM = PF02721)' T '35.2' 'not assigned.unknown' 'niben101scf05804_286398-288820' ' (original description: Putative corC, Description = 36.4 kDa proline-rich protein, PFAM = PF14547)' T '35.2' 'not assigned.unknown' 'niben101scf05804_413417-426496' ' no hits & (original description: Putative , Description = , PFAM = PF12231)' T '35.2' 'not assigned.unknown' 'niben101scf05809_2198-5209' ' no hits & (original description: Putative MTR_6g060172, Description = Transmembrane protein, putative, PFAM = PF11759)' T '35.2' 'not assigned.unknown' 'niben101scf05809_179719-182729' ' no hits & (original description: Putative , Description = No apical meristem family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05811_396312-398680' ' (original description: Putative LTP2, Description = Non-specific lipid-transfer protein 2, PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'niben101scf05811_671148-678089' ' no hits & (original description: Putative Sb03g006240, Description = Putative uncharacterized protein Sb03g006240, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05816_184528-188098' '(at5g17640 : 586.0) Protein of unknown function (DUF1005); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1005 (InterPro:IPR010410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1005) (TAIR:AT1G10020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|69725 : 235.0) no description available & (reliability: 1172.0) & (original description: Putative At4g29310, Description = Putative uncharacterized protein AT4g29310, PFAM = PF06219)' T '35.2' 'not assigned.unknown' 'niben101scf05820_162626-164973' '(at3g22540 : 120.0) Protein of unknown function (DUF1677); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1677, plant (InterPro:IPR012876); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1677) (TAIR:AT4G14819.1); Has 245 Blast hits to 245 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 245; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|71349 : 119.0) no description available & (reliability: 240.0) & (original description: Putative , Description = , PFAM = PF07911)' T '35.2' 'not assigned.unknown' 'niben101scf05821_241493-253903' '(at3g48770 : 1721.0) DNA binding;ATP binding; FUNCTIONS IN: DNA binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, BED-type predicted (InterPro:IPR003656), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28020.1); Has 779 Blast hits to 661 proteins in 171 species: Archae - 6; Bacteria - 159; Metazoa - 152; Fungi - 67; Plants - 310; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (reliability: 3442.0) & (original description: Putative BnaAnng19870D, Description = BnaAnng19870D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05821_241496-248306' '(at3g48770 : 663.0) DNA binding;ATP binding; FUNCTIONS IN: DNA binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, BED-type predicted (InterPro:IPR003656), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28020.1); Has 779 Blast hits to 661 proteins in 171 species: Archae - 6; Bacteria - 159; Metazoa - 152; Fungi - 67; Plants - 310; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (reliability: 1326.0) & (original description: Putative At3g48770, Description = ATP/DNA-binding protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05822_496576-499286' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05824_310136-312471' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05824_1471638-1474858' '(at5g12230 : 105.0) MED19A; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19480.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative MED19A, Description = Mediator of RNA polymerase II transcription subunit 19a, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05829_42591-58524' '(at4g25330 : 107.0) unknown protein; Has 21 Blast hits to 21 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative PGSC0003DMG400017406, Description = Rubisco methyltransferase family protein, PFAM = PF16719)' T '35.2' 'not assigned.unknown' 'niben101scf05830_145411-147887' ' no hits & (original description: Putative MADSy1, Description = Type I MADS box transcription factor, PFAM = PF00319)' T '35.2' 'not assigned.unknown' 'niben101scf05830_397006-401813' ' no hits & (original description: Putative PGSC0003DMG400012958, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05837_622196-634490' '(at5g64460 : 178.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G58280.1). & (gnl|cdd|39951 : 133.0) no description available & (reliability: 356.0) & (original description: Putative F5J6, Description = Phosphoglycerate mutase-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05841_24765-27019' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05841_48426-50722' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05848_304779-311212' ' (original description: Putative glysoja_019328, Description = Quinohemoprotein ethanol dehydrogenase type-1, PFAM = PF13360;PF13360)' T '35.2' 'not assigned.unknown' 'niben101scf05848_321751-324299' '(at5g16250 : 216.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative BnaA10g18070D, Description = BnaA10g18070D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05853_101555-143830' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05855_143438-147540' '(at2g44850 : 368.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0565 (InterPro:IPR018881); Has 106 Blast hits to 106 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|38011 : 221.0) no description available & (reliability: 736.0) & (original description: Putative C650ERIPDK, Description = Putative AC9 transposase, PFAM = PF10561)' T '35.2' 'not assigned.unknown' 'niben101scf05855_289895-294607' '(at3g60380 : 81.3) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT4G16790.1); Has 6102 Blast hits to 3981 proteins in 424 species: Archae - 6; Bacteria - 372; Metazoa - 2603; Fungi - 655; Plants - 291; Viruses - 28; Other Eukaryotes - 2147 (source: NCBI BLink). & (reliability: 162.6) & (original description: Putative PGSC0003DMG400025985, Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben101scf05855_433267-446643' '(at3g60480 : 82.4) unknown protein; Has 17 Blast hits to 17 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative BnaC08g30680D, Description = BnaC08g30680D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05867_211379-214176' '(at4g21445 : 148.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative PRIP, Description = Putative receptor-interacting protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05873_4801-14910' '(at1g50450 : 558.0) Saccharopine dehydrogenase ; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Saccharopine dehydrogenase / Homospermidine synthase (InterPro:IPR005097), NAD(P)-binding domain (InterPro:IPR016040); Has 1549 Blast hits to 1547 proteins in 500 species: Archae - 22; Bacteria - 980; Metazoa - 33; Fungi - 88; Plants - 49; Viruses - 0; Other Eukaryotes - 377 (source: NCBI BLink). & (gnl|cdd|86318 : 176.0) no description available & (reliability: 1116.0) & (original description: Putative CPLD49, Description = Saccharopine dehydrogenase-like protein, PFAM = PF03435)' T '35.2' 'not assigned.unknown' 'niben101scf05881_295428-330610' '(at4g04920 : 1733.0) Encodes a nuclear targeted protein that plays a role in the CBF pathway -downstream of CBF translation. Mutants have impaired cold responses, reduced levels of cold induced RNA transcripts, are sensitive to osmotic stress.; SENSITIVE TO FREEZING 6 (SFR6); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cold acclimation, circadian regulation of gene expression, response to osmotic stress, regulation of long-day photoperiodism, flowering; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages. & (reliability: 3466.0) & (original description: Putative MED16, Description = Mediator of RNA polymerase II transcription subunit 16, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05884_39960-48607' ' no hits & (original description: Putative , Description = Tetratricopeptide repeat-like superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05886_332499-337833' '(at3g61870 : 276.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 552.0) & (original description: Putative Sb04g001870, Description = Putative uncharacterized protein Sb04g001870, PFAM = PF13301)' T '35.2' 'not assigned.unknown' 'niben101scf05890_201868-206513' '(at2g28105 : 137.0) CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Replication factor A, C-terminal (InterPro:IPR013955); Has 20 Blast hits to 20 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative , Description = Alpha-L-fucosidase 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05891_12158-16485' '(at2g30990 : 174.0) Protein of unknown function (DUF688); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF688) (TAIR:AT1G29240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68662 : 91.0) no description available & (reliability: 348.0) & (original description: Putative , Description = Transcription initiation factor TFIID subunit 11, putative, PFAM = PF05097)' T '35.2' 'not assigned.unknown' 'niben101scf05896_281738-284127' ' no hits & (original description: Putative INH3, Description = Inhibitor-3, PFAM = PF07491)' T '35.2' 'not assigned.unknown' 'niben101scf05902_88803-91546' ' no hits & (original description: Putative PGSC0003DMG400014798, Description = Uncharacterized protein isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05902_249526-255967' '(at1g32260 : 182.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35480.1); Has 48 Blast hits to 48 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative F383_20656, Description = Envelope glycoprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05912_232973-248531' '(at3g48860 : 452.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23700.1); Has 12429 Blast hits to 9751 proteins in 897 species: Archae - 180; Bacteria - 1190; Metazoa - 6552; Fungi - 1361; Plants - 886; Viruses - 50; Other Eukaryotes - 2210 (source: NCBI BLink). & (reliability: 904.0) & (original description: Putative BnaC08g20540D, Description = BnaC08g20540D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05914_22862-26846' ' no hits & (original description: Putative PGSC0003DMG400005597, Description = Damaged dna-binding 2, putative isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05916_304559-313418' '(at5g12260 : 586.0) BEST Arabidopsis thaliana protein match is: glycosyltransferase family protein 2 (TAIR:AT5G60700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1172.0) & (original description: Putative At5g12260, Description = AT5g12260/MXC9_22, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05917_120508-124689' '(at3g60850 : 727.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; Has 42 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 1454.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05918_395864-403250' '(at4g14000 : 333.0) Putative methyltransferase family protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G43320.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38131 : 194.0) no description available & (reliability: 666.0) & (original description: Putative At4g14000, Description = Putative methyltransferase family protein, PFAM = PF10294)' T '35.2' 'not assigned.unknown' 'niben101scf05920_189344-201228' '(at3g22430 : 129.0) CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380); BEST Arabidopsis thaliana protein match is: XS domain-containing protein / XS zinc finger domain-containing protein-related (TAIR:AT5G23570.1); Has 565 Blast hits to 510 proteins in 121 species: Archae - 2; Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51; Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative PGSC0003DMG400019495, Description = Suppressor of gene silencing 3, putative, PFAM = PF03468)' T '35.2' 'not assigned.unknown' 'niben101scf05921_370364-374360' ' (original description: Putative Os02g0701833, Description = Putative ATP-dependent helicase YHR031C family, PFAM = PF05970)' T '35.2' 'not assigned.unknown' 'niben101scf05922_193748-196491' '(at5g64010 : 177.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 34 Blast hits to 34 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 354.0) & (original description: Putative PGSC0003DMG400012541, Description = U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1, putative isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05928_355036-360002' '(at2g03350 : 251.0) Protein of unknown function, DUF538; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT3G08890.2); Has 544 Blast hits to 544 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 543; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|86647 : 142.0) no description available & (reliability: 502.0) & (original description: Putative BnaCnng40610D, Description = BnaCnng40610D protein, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben101scf05929_88423-92407' '(at2g33360 : 261.0) Protein of unknown function (DUF3527); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3527 (InterPro:IPR021916); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3527) (TAIR:AT1G04490.2); Has 132 Blast hits to 119 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 522.0) & (original description: Putative F383_04585, Description = DNA ligase B, PFAM = PF12043)' T '35.2' 'not assigned.unknown' 'niben101scf05929_209633-212357' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05929_273182-288089' '(at1g04530 : 131.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G17940.1); Has 713 Blast hits to 362 proteins in 65 species: Archae - 10; Bacteria - 98; Metazoa - 37; Fungi - 8; Plants - 512; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative PGSC0003DMG400001551, Description = Tetratricopeptide repeat-like superfamily protein, putative isoform 1, PFAM = PF13432)' T '35.2' 'not assigned.unknown' 'niben101scf05932_34662-37630' '(at5g03560 : 249.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: nucleobase:cation symporter activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G38150.2); Has 33122 Blast hits to 10382 proteins in 236 species: Archae - 3; Bacteria - 11; Metazoa - 102; Fungi - 213; Plants - 32082; Viruses - 0; Other Eukaryotes - 711 (source: NCBI BLink). & (reliability: 498.0) & (original description: Putative Os06g0308200, Description = Ribosomal protein L15, PFAM = PF01535;PF01535;PF13041)' T '35.2' 'not assigned.unknown' 'niben101scf05932_118890-121222' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05932_245661-248125' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05937_176481-182192' '(at5g12930 : 186.0) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative BnaA02g01310D, Description = BnaA02g01310D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05937_221435-235230' '(at4g12070 : 533.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1066.0) & (original description: Putative F16J13.140, Description = Putative uncharacterized protein At4g12070/F16J13_140, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05938_121388-126052' '(at1g21770 : 131.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT1G77540.1); Has 425 Blast hits to 425 proteins in 193 species: Archae - 10; Bacteria - 360; Metazoa - 6; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative At1g77540, Description = Acetyltransferase At1g77540, PFAM = PF14542)' T '35.2' 'not assigned.unknown' 'niben101scf05938_234742-237036' ' no hits & (original description: Putative PI-4, Description = Proteinase inhibitor, PFAM = PF00280)' T '35.2' 'not assigned.unknown' 'niben101scf05938_272151-274455' ' no hits & (original description: Putative PI-4, Description = Proteinase inhibitor, PFAM = PF00280)' T '35.2' 'not assigned.unknown' 'niben101scf05939_406754-409593' '(at3g59390 : 324.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2054 (InterPro:IPR019352); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38346 : 144.0) no description available & (reliability: 648.0) & (original description: Putative BnaC06g17300D, Description = BnaC06g17300D protein, PFAM = PF10218;PF15024)' T '35.2' 'not assigned.unknown' 'niben101scf05942_12100-21523' '(at3g47850 : 105.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; Has 57 Blast hits to 57 proteins in 32 species: Archae - 0; Bacteria - 5; Metazoa - 12; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative PGSC0003DMG400033064, Description = Plant/T23J7-180 protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05948_736952-775331' ' no hits & (original description: Putative , Description = Reverse transcriptase family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05950_127501-130487' ' no hits & (original description: Putative PGSC0003DMG400044873, Description = Translation initiation factor IF-2, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05950_219287-224343' ' no hits & (original description: Putative PGSC0003DMG400034309, Description = Glycosylphosphatidylinositol-anchored lipid protein transfer 1, putative isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05952_150891-162077' '(at2g16990 : 344.0) Major facilitator superfamily protein; FUNCTIONS IN: tetracycline transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G16980.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38027 : 200.0) no description available & (reliability: 688.0) & (original description: Putative MEE15, Description = Tetracycline transporter-like protein 1, PFAM = PF07690)' T '35.2' 'not assigned.unknown' 'niben101scf05952_174596-177333' '(at1g76070 : 88.6) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20310.1); Has 66 Blast hits to 66 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05954_1511-8171' '(at2g40070 : 165.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1); Has 108635 Blast hits to 60786 proteins in 2176 species: Archae - 287; Bacteria - 15142; Metazoa - 39415; Fungi - 26849; Plants - 4416; Viruses - 2864; Other Eukaryotes - 19662 (source: NCBI BLink). & (reliability: 330.0) & (original description: Putative At2g40070, Description = At2g40070, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05955_322357-324698' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05955_406211-415152' '(at2g46980 : 136.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown. & (reliability: 272.0) & (original description: Putative PGSC0003DMG400001122, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05956_57254-60576' ' no hits & (original description: Putative TCM_015837, Description = Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, PFAM = PF14368)' T '35.2' 'not assigned.unknown' 'niben101scf05957_4803-6403' ' no hits & (original description: Putative orf159a, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05961_12654-16427' '(at3g25400 : 148.0) CONTAINS InterPro DOMAIN/s: NTP Pyrophosphohydrolase MazG-related, RS21-C6 (InterPro:IPR011394), EAR (InterPro:IPR009039), NTP pyrophosphohydrolase MazG, putative catalytic core (InterPro:IPR004518); Has 1123 Blast hits to 1121 proteins in 452 species: Archae - 22; Bacteria - 753; Metazoa - 81; Fungi - 3; Plants - 83; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative CDA03, Description = Nucleotide pyrophosphohydrolase, PFAM = PF12643)' T '35.2' 'not assigned.unknown' 'niben101scf05961_94164-98013' '(at5g48500 : 87.8) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative F383_27938, Description = Atp-dependent rna helicase dbp7, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05961_149873-160857' '(at1g68310 : 226.0) Encodes a protein that has been shown to specifically interact with a sequence motif, PIEPPPHH, in the cytoplasmic tail of a membrane protein that directs the protein from the ER to vacuoles where it is internalized.; FUNCTIONS IN: vacuolar sorting signal binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF59 (InterPro:IPR002744); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF59) (TAIR:AT3G50845.1); Has 563 Blast hits to 563 proteins in 217 species: Archae - 4; Bacteria - 0; Metazoa - 246; Fungi - 136; Plants - 85; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (gnl|cdd|38591 : 207.0) no description available & (gnl|cdd|34734 : 143.0) no description available & (reliability: 452.0) & (original description: Putative AE7, Description = Protein AE7, PFAM = PF01883)' T '35.2' 'not assigned.unknown' 'niben101scf05961_196645-199136' '(at3g07480 : 202.0) 2Fe-2S ferredoxin-like superfamily protein; FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); Has 1263 Blast hits to 1263 proteins in 213 species: Archae - 0; Bacteria - 293; Metazoa - 132; Fungi - 8; Plants - 41; Viruses - 0; Other Eukaryotes - 789 (source: NCBI BLink). & (gnl|cdd|38519 : 121.0) no description available & (reliability: 404.0) & (original description: Putative PGSC0003DMG400027686, Description = 2Fe-2S ferredoxin-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05961_364728-378818' '(at3g07565 : 225.0) Protein of unknown function (DUF3755); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3755 (InterPro:IPR022228); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3755) (TAIR:AT1G10820.2). & (reliability: 450.0) & (original description: Putative DRIF1, Description = DIV and RAD interacting factor 1, PFAM = PF12579)' T '35.2' 'not assigned.unknown' 'niben101scf05962_433713-493817' ' no hits & (original description: Putative , Description = Putative egg cell-secreted protein 1.2-like, PFAM = PF05617)' T '35.2' 'not assigned.unknown' 'niben101scf05962_520601-522966' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05964_1402-3777' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05964_53801-59312' '(at5g27990 : 98.6) Pre-rRNA-processing protein TSR2, conserved region; CONTAINS InterPro DOMAIN/s: Pre-rRNA-processing protein TSR2, conserved region (InterPro:IPR019398); BEST Arabidopsis thaliana protein match is: Pre-rRNA-processing protein TSR2, conserved region (TAIR:AT3G22510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 197.2) & (original description: Putative , Description = , PFAM = PF10273)' T '35.2' 'not assigned.unknown' 'niben101scf05969_12810-25766' '(at4g36630 : 1248.0) EMBRYO DEFECTIVE 2754 (EMB2754); FUNCTIONS IN: small GTPase regulator activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Citron-like (InterPro:IPR001180), Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1 (InterPro:IPR019452), Armadillo-type fold (InterPro:IPR016024), Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2 (InterPro:IPR019453); Has 871 Blast hits to 660 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 376; Fungi - 292; Plants - 87; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). & (gnl|cdd|37274 : 453.0) no description available & (reliability: 2496.0) & (original description: Putative EMB2754, Description = Putative uncharacterized protein At4g36630, PFAM = PF00780;PF00637;PF10367;PF10366)' T '35.2' 'not assigned.unknown' 'niben101scf05977_187025-195639' '(at4g22860 : 280.0) Cell cycle regulated microtubule associated protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Cell cycle regulated microtubule associated protein (InterPro:IPR022021); BEST Arabidopsis thaliana protein match is: Cell cycle regulated microtubule associated protein (TAIR:AT4G11990.1); Has 104 Blast hits to 96 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 3; Plants - 81; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative BnaA08g10490D, Description = BnaA08g10490D protein, PFAM = PF12214)' T '35.2' 'not assigned.unknown' 'niben101scf05991_1-614' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf05993_137644-143023' ' no hits & (original description: Putative PGSC0003DMG400011962, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05997_149208-154124' '(at1g03900 : 310.0) member of NAP family, an heterogeneous subfamily of the ATP-binding Cassette (ABC) superfamily of membrane transporters. The NAPs proteins are characterized by having only one nucleotide-binding folds (NBFs) domain.; non-intrinsic ABC protein 4 (NAP4); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: extracellular transport; LOCATED IN: membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Adaptin ear-binding coat-associated protein 1 NECAP-1 (InterPro:IPR012466); BEST Arabidopsis thaliana protein match is: Adaptin ear-binding coat-associated protein 1 NECAP-1 (TAIR:AT3G58600.1); Has 448 Blast hits to 448 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 218; Fungi - 61; Plants - 115; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|37711 : 261.0) no description available & (gnl|cdd|87402 : 223.0) no description available & (reliability: 620.0) & (original description: Putative Necap2, Description = Adaptin ear-binding coat-associated protein 2, PFAM = PF07933)' T '35.2' 'not assigned.unknown' 'niben101scf05998_234741-237114' ' no hits & (original description: Putative PGSC0003DMG400004241, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf05998_408693-416833' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06000_281483-285841' '(at3g52860 : 80.9) unknown protein; Has 86 Blast hits to 86 proteins in 36 species: Archae - 0; Bacteria - 2; Metazoa - 41; Fungi - 13; Plants - 26; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative MED28, Description = Mediator of RNA polymerase II transcription subunit 28, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06000_420607-422939' ' no hits & (original description: Putative orf111a, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06005_26149-31536' '(at4g13690 : 90.5) unknown protein; Has 37 Blast hits to 37 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06008_15398-26670' ' no hits & (original description: Putative TOM5, Description = Mitochondrial import receptor subunit TOM5 homolog, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06008_49303-52104' '(gnl|cdd|70036 : 124.0) no description available & (at5g08050 : 120.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1118 (InterPro:IPR009500), Uncharacterised conserved protein UCP022207 (InterPro:IPR016801); Has 78 Blast hits to 78 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative Os11g0460900, Description = Os11g0460900 protein, PFAM = PF06549)' T '35.2' 'not assigned.unknown' 'niben101scf06008_179198-186949' '(at1g74160 : 526.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G18620.1); Has 3407 Blast hits to 2217 proteins in 314 species: Archae - 0; Bacteria - 264; Metazoa - 1296; Fungi - 318; Plants - 346; Viruses - 34; Other Eukaryotes - 1149 (source: NCBI BLink). & (reliability: 1052.0) & (original description: Putative At1g74160, Description = Putative uncharacterized protein At1g74160, PFAM = PF14309;PF14383)' T '35.2' 'not assigned.unknown' 'niben101scf06009_72835-76229' ' no hits & (original description: Putative , Description = , PFAM = PF03763)' T '35.2' 'not assigned.unknown' 'niben101scf06017_211340-217414' '(at4g14385 : 127.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf6 (InterPro:IPR015418); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72755 : 100.0) no description available & (reliability: 254.0) & (original description: Putative Os12g0298600, Description = Expressed protein, PFAM = PF09340)' T '35.2' 'not assigned.unknown' 'niben101scf06026_71807-77430' '(at3g29180 : 436.0) Protein of unknown function (DUF1336); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT5G39430.1). & (gnl|cdd|70520 : 289.0) no description available & (reliability: 872.0) & (original description: Putative CW14, Description = AT3G29180 protein, PFAM = PF07059)' T '35.2' 'not assigned.unknown' 'niben101scf06026_132964-140410' '(at3g29185 : 498.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF3598 (InterPro:IPR022017); Has 54 Blast hits to 54 proteins in 23 species: Archae - 0; Bacteria - 24; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 996.0) & (original description: Putative Os03g0758900, Description = Os03g0758900 protein, PFAM = PF12204)' T '35.2' 'not assigned.unknown' 'niben101scf06032_21670-28995' '(at1g11120 : 82.4) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28170.1); Has 94 Blast hits to 94 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative PGSC0003DMG400021675, Description = BnaA01g35980D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06032_196359-200982' '(at1g47980 : 335.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62730.1); Has 169 Blast hits to 169 proteins in 41 species: Archae - 0; Bacteria - 68; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 670.0) & (original description: Putative At1g47980, Description = Desiccation-related protein PCC13-62, PFAM = PF13668)' T '35.2' 'not assigned.unknown' 'niben101scf06042_382213-384647' ' no hits & (original description: Putative psbX, Description = Chloroplast photosystem II subunit X, PFAM = PF06596)' T '35.2' 'not assigned.unknown' 'niben101scf06042_512768-518680' '(at5g20610 : 687.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26160.1); Has 918 Blast hits to 759 proteins in 180 species: Archae - 6; Bacteria - 105; Metazoa - 264; Fungi - 89; Plants - 167; Viruses - 5; Other Eukaryotes - 282 (source: NCBI BLink). & (reliability: 1374.0) & (original description: Putative PMIR1, Description = Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1, PFAM = PF01476;PF10358)' T '35.2' 'not assigned.unknown' 'niben101scf06043_292234-296492' ' no hits & (original description: Putative , Description = Valine--tRNA ligase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06044_7026-13875' '(at3g24600 : 183.0) Late embryogenesis abundant protein, group 2; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT4G35170.1); Has 347 Blast hits to 183 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 347; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative Os06g0163300, Description = Os06g0163300 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06050_79407-81707' ' no hits & (original description: Putative , Description = , PFAM = PF06839)' T '35.2' 'not assigned.unknown' 'niben101scf06058_101215-103829' ' no hits & (original description: Putative PGSC0003DMG400000290, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06059_166032-168768' ' (original description: Putative NBS390, Description = NBS-coding resistance gene analog, PFAM = PF00931)' T '35.2' 'not assigned.unknown' 'niben101scf06064_82308-85734' ' no hits & (original description: Putative PGSC0003DMG400022768, Description = CASP-like protein, PFAM = PF04535)' T '35.2' 'not assigned.unknown' 'niben101scf06064_131498-135989' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06076_768-3061' ' no hits & (original description: Putative PGSC0003DMG400026567, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06077_92144-95265' '(at4g35510 : 82.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17540.3); Has 182 Blast hits to 179 proteins in 73 species: Archae - 0; Bacteria - 87; Metazoa - 17; Fungi - 9; Plants - 50; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative PGSC0003DMG400018682, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06077_397884-403984' ' no hits & (original description: Putative , Description = Vacuolar iron transporter family protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06078_193237-196714' ' no hits & (original description: Putative PGSC0003DMG400026255, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06080_338346-341362' '(at3g26670 : 389.0) Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF803) (TAIR:AT3G23870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38133 : 222.0) no description available & (gnl|cdd|86910 : 88.0) no description available & (reliability: 778.0) & (original description: Putative PGSC0003DMG400025244, Description = Probable magnesium transporter, PFAM = PF05653)' T '35.2' 'not assigned.unknown' 'niben101scf06081_123654-128586' ' no hits & (original description: Putative bZIP, Description = Protein ABSCISIC ACID-INSENSITIVE 5, PFAM = PF00170)' T '35.2' 'not assigned.unknown' 'niben101scf06081_206806-212332' ' (original description: Putative rplP2, Description = 60S acidic ribosomal protein P2, PFAM = PF00428)' T '35.2' 'not assigned.unknown' 'niben101scf06081_362031-365760' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06084_23051-53816' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06087_677655-680218' '(at3g18800 : 220.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; Has 58 Blast hits to 58 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative At3g18800, Description = At3g18800, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06087_840057-845008' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06087_1273125-1276165' '(at1g15190 : 86.7) Fasciclin-like arabinogalactan family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); Has 106 Blast hits to 85 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 106; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative PGSC0003DMG400035592, Description = Fasciclin-like arabinogalactan protein 18, putative, PFAM = PF02469)' T '35.2' 'not assigned.unknown' 'niben101scf06088_83675-86780' ' no hits & (original description: Putative BnaC06g07680D, Description = BnaC06g07680D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06090_111819-114940' '(at2g01410 : 376.0) NHL domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT2G16760.1); Has 137 Blast hits to 137 proteins in 39 species: Archae - 0; Bacteria - 57; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 752.0) & (original description: Putative At2g01410, Description = Putative uncharacterized protein At2g01410, PFAM = PF08450)' T '35.2' 'not assigned.unknown' 'niben101scf06091_55428-57769' '(at1g15900 : 99.4) unknown protein; Has 19 Blast hits to 19 proteins in 10 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 198.8) & (original description: Putative BnaA06g10570D, Description = BnaA06g10570D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06091_115389-120991' ' no hits & (original description: Putative BnaA07g20020D, Description = BnaA07g20020D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06091_878943-881742' '(at3g15810 : 262.0) Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT1G80120.1); Has 436 Blast hits to 435 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 7; Plants - 429; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86676 : 168.0) no description available & (reliability: 524.0) & (original description: Putative At3g15810, Description = Protein LURP-one-related 12, PFAM = PF04525)' T '35.2' 'not assigned.unknown' 'niben101scf06094_158547-161089' ' no hits & (original description: Putative PGSC0003DMG400026167, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06096_160795-167969' ' no hits & (original description: Putative NAC1, Description = NAC transcription factor, PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'niben101scf06100_13945-16364' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf06100_220302-241535' '(at1g31940 : 142.0) unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35585.1); Has 67 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative At1g31940, Description = At1g31940/F5M6.6, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06101_276419-283419' ' no hits & (original description: Putative , Description = , PFAM = PF03242)' T '35.2' 'not assigned.unknown' 'niben101scf06103_188201-197502' '(at5g05310 : 294.0) TLC ATP/ADP transporter; Has 647 Blast hits to 643 proteins in 131 species: Archae - 0; Bacteria - 265; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (reliability: 588.0) & (original description: Putative At5g05310, Description = TLC ATP/ADP transporter, PFAM = PF03219)' T '35.2' 'not assigned.unknown' 'niben101scf06103_208360-212938' '(at2g38370 : 158.0) Plant protein of unknown function (DUF827); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT3G51720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72811 : 135.0) no description available & (reliability: 316.0) & (original description: Putative TCM_019748, Description = Chromosome partition protein smc, PFAM = PF05701;PF05701)' T '35.2' 'not assigned.unknown' 'niben101scf06105_129554-136216' '(at1g71360 : 416.0) Galactose-binding protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Sad1/UNC-like, C-terminal (InterPro:IPR012919), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Galactose-binding protein (TAIR:AT1G22882.1); Has 1743 Blast hits to 1314 proteins in 210 species: Archae - 22; Bacteria - 165; Metazoa - 539; Fungi - 114; Plants - 96; Viruses - 20; Other Eukaryotes - 787 (source: NCBI BLink). & (gnl|cdd|36610 : 267.0) no description available & (gnl|cdd|87361 : 121.0) no description available & (reliability: 832.0) & (original description: Putative MPL, Description = Membrane protein-like, PFAM = PF07738)' T '35.2' 'not assigned.unknown' 'niben101scf06113_2303-4951' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06113_58409-61699' '(at4g21310 : 185.0) Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT2G32280.1); Has 141 Blast hits to 141 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70227 : 94.2) no description available & (reliability: 370.0) & (original description: Putative Sb07g002930, Description = Putative uncharacterized protein Sb07g002930, PFAM = PF06749)' T '35.2' 'not assigned.unknown' 'niben101scf06117_223934-227959' ' no hits & (original description: Putative PGSC0003DMG400018353, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06117_233020-235678' '(at2g20875 : 95.9) Encodes a secretory peptide EPF1 involved in stomatal development. EPF1 is related to EPF2 which controls asymmetric cell divisions during stomatal devlopment.; EPIDERMAL PATTERNING FACTOR 1 (EPF1); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71866.1); Has 74 Blast hits to 74 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 191.8) & (original description: Putative EPF1, Description = Protein EPIDERMAL PATTERNING FACTOR 1, PFAM = PF17181)' T '35.2' 'not assigned.unknown' 'niben101scf06117_257890-263439' '(at4g03420 : 418.0) Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G03610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69161 : 414.0) no description available & (reliability: 836.0) & (original description: Putative F9H3.4, Description = Putative uncharacterized protein AT4g03420, PFAM = PF05623)' T '35.2' 'not assigned.unknown' 'niben101scf06123_541251-543727' '(gnl|cdd|68105 : 118.0) no description available & (at5g03230 : 105.0) Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT5G60680.1); Has 326 Blast hits to 326 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 324; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative glysoja_007963, Description = , PFAM = PF04520)' T '35.2' 'not assigned.unknown' 'niben101scf06123_630748-636744' ' no hits & (original description: Putative MTR_1g064490, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06128_85225-89090' ' no hits & (original description: Putative PSRP5, Description = 50S ribosomal protein 5 alpha, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06132_168572-171972' '(at3g05390 : 657.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G01240.1); Has 507 Blast hits to 498 proteins in 33 species: Archae - 4; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 493; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 1314.0) & (original description: Putative Os06g0474300, Description = Os06g0474300 protein, PFAM = PF03141)' T '35.2' 'not assigned.unknown' 'niben101scf06144_160713-173573' '(at1g30580 : 695.0) GTP binding; FUNCTIONS IN: GTP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF933 (InterPro:IPR013029), TGS-like (InterPro:IPR012676), GTP1/OBG (InterPro:IPR006073), Conserved hypothetical protein CHP00092 (InterPro:IPR004396), GTP-binding protein, HSR1-related (InterPro:IPR002917), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: GTP-binding protein-related (TAIR:AT1G56050.1); Has 19150 Blast hits to 19146 proteins in 3028 species: Archae - 362; Bacteria - 11244; Metazoa - 716; Fungi - 612; Plants - 292; Viruses - 0; Other Eukaryotes - 5924 (source: NCBI BLink). & (gnl|cdd|36704 : 551.0) no description available & (gnl|cdd|57983 : 543.0) no description available & (reliability: 1390.0) & (original description: Putative YchF1, Description = Obg-like ATPase 1, PFAM = PF01926;PF06071)' T '35.2' 'not assigned.unknown' 'niben101scf06153_35641-38711' '(at3g57990 : 95.5) unknown protein; Has 1497 Blast hits to 1323 proteins in 52 species: Archae - 0; Bacteria - 4; Metazoa - 23; Fungi - 34; Plants - 61; Viruses - 0; Other Eukaryotes - 1375 (source: NCBI BLink). & (reliability: 191.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06153_159112-162308' '(at1g32520 : 320.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 143 Blast hits to 142 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 640.0) & (original description: Putative At1g32520, Description = Putative uncharacterized protein At1g32520, PFAM = PF07534)' T '35.2' 'not assigned.unknown' 'niben101scf06153_194463-203815' '(at2g38695 : 201.0) unknown protein; Has 56 Blast hits to 54 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 402.0) & (original description: Putative BnaC03g21550D, Description = BnaC03g21550D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06154_246565-251669' '(at1g33490 : 157.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2062 (InterPro:IPR018639); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10140.1); Has 88 Blast hits to 88 proteins in 29 species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative TIDP3497, Description = Cytoplasmic membrane protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06155_206908-211330' '(at2g04865 : 702.0) Aminotransferase-like, plant mobile domain family protein; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT2G25010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71762 : 81.0) no description available & (reliability: 1404.0) & (original description: Putative At2g04865, Description = Aminotransferase-like, plant mobile domain family protein, PFAM = PF10536)' T '35.2' 'not assigned.unknown' 'niben101scf06156_191867-194380' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06163_1649-4911' '(at2g24530 : 254.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 508.0) & (original description: Putative PGSC0003DMG400014161, Description = Transcriptional coactivator Hfi1/Transcriptional adapter 1, PFAM = PF12767)' T '35.2' 'not assigned.unknown' 'niben101scf06163_172129-177346' '(at5g61865 : 190.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 380.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06163_224355-240559' '(at5g50930 : 148.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone-fold (InterPro:IPR009072); Has 147 Blast hits to 147 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 59; Fungi - 65; Plants - 16; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative L484_003968, Description = Centromere protein S, PFAM = PF15630)' T '35.2' 'not assigned.unknown' 'niben101scf06171_2933-5835' '(at5g66440 : 92.4) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative PGSC0003DMG400003697, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06172_107036-112471' '(at5g39890 : 295.0) Protein of unknown function (DUF1637); FUNCTIONS IN: cysteamine dioxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1637 (InterPro:IPR012864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1637) (TAIR:AT5G15120.1); Has 361 Blast hits to 361 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 102; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|71286 : 282.0) no description available & (gnl|cdd|39482 : 261.0) no description available & (reliability: 590.0) & (original description: Putative PCO2, Description = Plant cysteine oxidase 2, PFAM = PF07847)' T '35.2' 'not assigned.unknown' 'niben101scf06176_176357-180856' '(at1g78110 : 212.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22230.1); Has 5452 Blast hits to 3541 proteins in 289 species: Archae - 4; Bacteria - 165; Metazoa - 1756; Fungi - 532; Plants - 205; Viruses - 141; Other Eukaryotes - 2649 (source: NCBI BLink). & (reliability: 424.0) & (original description: Putative T11I11.5, Description = At1g78110, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06176_358972-362492' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf06176_509546-514046' '(at1g78150 : 272.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G35780.1). & (reliability: 544.0) & (original description: Putative F383_25525, Description = N-lysine methyltransferase SEE1, PFAM = PF13266)' T '35.2' 'not assigned.unknown' 'niben101scf06183_1-1901' '(at2g42610 : 229.0) LIGHT SENSITIVE HYPOCOTYLS 10 (LSH10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT1G07090.1); Has 309 Blast hits to 309 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68427 : 221.0) no description available & (reliability: 458.0) & (original description: Putative LSH10, Description = Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10, PFAM = PF04852)' T '35.2' 'not assigned.unknown' 'niben101scf06183_316230-329757' ' (original description: Putative alr3038, Description = Alr3038 protein, PFAM = PF08241)' T '35.2' 'not assigned.unknown' 'niben101scf06183_453879-458320' ' no hits & (original description: Putative , Description = Seed biotin-containing SBP65, PFAM = PF02987)' T '35.2' 'not assigned.unknown' 'niben101scf06186_610011-751160' ' (original description: Putative pol, Description = Reverse transcriptase, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf06186_640145-647199' ' no hits & (original description: Putative At2g37540, Description = Short-chain dehydrogenase TIC 32, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06186_697980-700711' '(at5g52420 : 241.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 482.0) & (original description: Putative BnaC02g15130D, Description = BnaC02g15130D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06186_868859-881594' '(at3g49055 : 166.0) unknown protein; EXPRESSED IN: cotyledon; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24560.1); Has 52205 Blast hits to 29376 proteins in 1994 species: Archae - 873; Bacteria - 6150; Metazoa - 27099; Fungi - 3784; Plants - 3062; Viruses - 130; Other Eukaryotes - 11107 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative BnaA06g16220D, Description = BnaA06g16220D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06187_9836-17875' '(at3g19340 : 308.0) LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3754 (InterPro:IPR022227); BEST Arabidopsis thaliana protein match is: aminopeptidases (TAIR:AT5G13940.1); Has 308 Blast hits to 303 proteins in 113 species: Archae - 0; Bacteria - 164; Metazoa - 10; Fungi - 0; Plants - 111; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 616.0) & (original description: Putative At3g19340, Description = Putative disease resistance protein-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06187_16982-28708' '(at5g13950 : 258.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02290.1). & (reliability: 516.0) & (original description: Putative PGSC0003DMG400020237, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06187_215373-217294' '(at2g31410 : 146.0) unknown protein; Has 1719 Blast hits to 1091 proteins in 184 species: Archae - 5; Bacteria - 24; Metazoa - 559; Fungi - 169; Plants - 192; Viruses - 1; Other Eukaryotes - 769 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative Sb04g024830, Description = Putative uncharacterized protein Sb04g024830, PFAM = PF03879)' T '35.2' 'not assigned.unknown' 'niben101scf06190_28442-30741' ' no hits & (original description: Putative pol, Description = Retrotransposon protein, putative, unclassified, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06190_299462-302034' '(at1g15760 : 154.0) Sterile alpha motif (SAM) domain-containing protein; CONTAINS InterPro DOMAIN/s: Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 2 (InterPro:IPR011510); BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G80520.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative , Description = , PFAM = PF07647)' T '35.2' 'not assigned.unknown' 'niben101scf06200_206564-215751' '(at1g28380 : 744.0) This gene is predicted to encode a protein involved in negatively regulating salicylic acid-related defense responses and cell death programs. nsl1 mutants develop necrotic lesions spontaneously and show other features of a defense response, such as higher levels of SA and disease resistance-related transcripts, in the absence of a biotic stimulus. The NSL1 protein is predicted to have a MACPF domain, found in proteins that form a transmembrane pore in mammalian immune responses. NSL1 transcript levels do not appear to change in response to biotic stresses, but are elevated by cycloheximide in seedlings, and by sodium chloride in roots.; necrotic spotted lesions 1 (NSL1); CONTAINS InterPro DOMAIN/s: Membrane attack complex component/perforin (MACPF) domain (InterPro:IPR020864); BEST Arabidopsis thaliana protein match is: MAC/Perforin domain-containing protein (TAIR:AT4G24290.2); Has 203 Blast hits to 202 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 202; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1488.0) & (original description: Putative NSL1, Description = MACPF domain-containing protein NSL1, PFAM = PF01823)' T '35.2' 'not assigned.unknown' 'niben101scf06200_380262-383491' ' no hits & (original description: Putative NbARP, Description = ROX1 homologue, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06200_396725-399054' ' no hits & (original description: Putative PGSC0003DMG400045123, Description = Zinc finger containing preotein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06205_150668-154703' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06205_300776-303161' ' no hits & (original description: Putative , Description = , PFAM = PF13966)' T '35.2' 'not assigned.unknown' 'niben101scf06211_241705-244514' '(at4g35690 : 129.0) Arabidopsis protein of unknown function (DUF241); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT4G35710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66742 : 126.0) no description available & (reliability: 258.0) & (original description: Putative PGSC0003DMG400001539, Description = DUF241 domain protein, PFAM = PF03087)' T '35.2' 'not assigned.unknown' 'niben101scf06218_7301-12209' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06218_155702-162714' '(at1g30755 : 474.0) Protein of unknown function (DUF668); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700), Protein of unknown function DUF3475 (InterPro:IPR021864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT1G34320.1); Has 465 Blast hits to 399 proteins in 71 species: Archae - 2; Bacteria - 14; Metazoa - 66; Fungi - 16; Plants - 336; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (gnl|cdd|68572 : 117.0) no description available & (reliability: 948.0) & (original description: Putative At1g34320, Description = DUF668 family protein, PFAM = PF11961;PF05003)' T '35.2' 'not assigned.unknown' 'niben101scf06218_318596-328672' '(at4g24175 : 194.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0307 (InterPro:IPR006839); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative MTR_1g112320, Description = DUF615 family protein, PFAM = PF04751)' T '35.2' 'not assigned.unknown' 'niben101scf06218_549458-553911' '(at4g24200 : 202.0) Transcription elongation factor (TFIIS) family protein; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923); Has 1174 Blast hits to 562 proteins in 174 species: Archae - 0; Bacteria - 342; Metazoa - 163; Fungi - 176; Plants - 109; Viruses - 0; Other Eukaryotes - 384 (source: NCBI BLink). & (reliability: 404.0) & (original description: Putative BnaC07g38790D, Description = BnaC07g38790D protein, PFAM = PF08711)' T '35.2' 'not assigned.unknown' 'niben101scf06218_723729-729229' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06219_2701-7563' '(at4g20050 : 556.0) Encodes a polygalacturonase that plays a direct role in degrading the pollen mother cell wall during microspore development.; QUARTET 3 (QRT3); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: microsporogenesis, pollen exine formation; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G20040.1); Has 103 Blast hits to 103 proteins in 26 species: Archae - 2; Bacteria - 18; Metazoa - 0; Fungi - 3; Plants - 67; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 1112.0) & (original description: Putative QRT3, Description = Polygalacturonase QRT3, PFAM = PF12708)' T '35.2' 'not assigned.unknown' 'niben101scf06221_183872-186216' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06223_125387-127833' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06223_144782-148840' '(at2g38070 : 325.0) Protein of unknown function (DUF740); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF740) (TAIR:AT3G09070.1); Has 108 Blast hits to 106 proteins in 27 species: Archae - 0; Bacteria - 3; Metazoa - 6; Fungi - 2; Plants - 76; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|68893 : 319.0) no description available & (reliability: 650.0) & (original description: Putative At3g09070, Description = UPF0503 protein At3g09070, chloroplastic, PFAM = PF05340)' T '35.2' 'not assigned.unknown' 'niben101scf06228_35514-41015' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06233_126977-135377' '(at5g15510 : 280.0) TPX2 (targeting protein for Xklp2) protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT3G01015.1). & (reliability: 560.0) & (original description: Putative At5g15510, Description = TPX2 (Targeting protein for Xklp2) family protein, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'niben101scf06233_177355-179666' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06235_125911-132661' ' no hits & (original description: Putative L484_023658, Description = Putative high mobility group B protein 11, PFAM = PF00505;PF01388)' T '35.2' 'not assigned.unknown' 'niben101scf06236_1-3177' '(at3g60680 : 439.0) Plant protein of unknown function (DUF641); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF641) (TAIR:AT2G45260.1); Has 309 Blast hits to 304 proteins in 28 species: Archae - 0; Bacteria - 6; Metazoa - 7; Fungi - 2; Plants - 284; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|68434 : 120.0) no description available & (reliability: 878.0) & (original description: Putative T4C21_90, Description = At3g60680, PFAM = PF04859)' T '35.2' 'not assigned.unknown' 'niben101scf06248_35467-38075' ' no hits & (original description: Putative PGSC0003DMG400007672, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06248_266737-271630' ' no hits & (original description: Putative , Description = , PFAM = PF00403)' T '35.2' 'not assigned.unknown' 'niben101scf06248_274436-279691' ' no hits & (original description: Putative PGSC0003DMG400020143, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06249_85241-89077' '(at5g62440 : 163.0) Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division.; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: nucleologenesis, regulation of cell division, embryo development; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3223 (InterPro:IPR021602); Has 1122 Blast hits to 800 proteins in 144 species: Archae - 2; Bacteria - 150; Metazoa - 333; Fungi - 187; Plants - 279; Viruses - 3; Other Eukaryotes - 168 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative EMB514, Description = EMB514, PFAM = PF11523)' T '35.2' 'not assigned.unknown' 'niben101scf06249_586251-588658' ' no hits & (original description: Putative CML30, Description = Calcium-binding EF-hand, PFAM = PF13499)' T '35.2' 'not assigned.unknown' 'niben101scf06252_65785-70745' '(at1g08220 : 253.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitochondrial proton-transporting ATP synthase complex assembly; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase assembly factor ATP10, mitochondria (InterPro:IPR007849); Has 152 Blast hits to 152 proteins in 76 species: Archae - 6; Bacteria - 0; Metazoa - 2; Fungi - 92; Plants - 30; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|39814 : 128.0) no description available & (gnl|cdd|68738 : 125.0) no description available & (reliability: 506.0) & (original description: Putative LOC100282465, Description = ATP10 protein, PFAM = PF05176)' T '35.2' 'not assigned.unknown' 'niben101scf06258_139144-148583' ' no hits & (original description: Putative BnaA09g44010D, Description = BnaA09g44010D protein, PFAM = PF01585)' T '35.2' 'not assigned.unknown' 'niben101scf06267_8923-16170' '(at5g66290 : 233.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative Os03g0727100, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06267_309541-312071' '(at2g17972 : 113.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 34 Blast hits to 34 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative At2g17972, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06273_16700-23252' '(at2g33420 : 1249.0) CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT1G04470.1); Has 196 Blast hits to 182 proteins in 26 species: Archae - 0; Bacteria - 2; Metazoa - 13; Fungi - 0; Plants - 176; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|69201 : 440.0) no description available & (reliability: 2498.0) & (original description: Putative F19P19.6, Description = F19P19.6 protein, PFAM = PF05664)' T '35.2' 'not assigned.unknown' 'niben101scf06275_192611-198074' '(at4g28025 : 124.0) unknown protein. & (reliability: 248.0) & (original description: Putative At4g28020, Description = Putative uncharacterized protein AT4g28020, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06275_346536-349012' ' (original description: Putative D1, Description = Flower-specific defensin, PFAM = PF00304)' T '35.2' 'not assigned.unknown' 'niben101scf06280_141397-145978' '(at5g14970 : 287.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 579 Blast hits to 397 proteins in 95 species: Archae - 0; Bacteria - 294; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink). & (reliability: 574.0) & (original description: Putative F2G14_90, Description = At4g33110, PFAM = PF05542;PF05542)' T '35.2' 'not assigned.unknown' 'niben101scf06280_247704-250690' '(at3g01360 : 241.0) Family of unknown function (DUF716) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF716) (TAIR:AT1G55230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68394 : 172.0) no description available & (reliability: 482.0) & (original description: Putative BnaA05g33920D, Description = BnaA05g33920D protein, PFAM = PF04819)' T '35.2' 'not assigned.unknown' 'niben101scf06280_347938-356325' '(at3g01370 : 912.0) Encodes a protein containing a CRM domain that is involved in group I and group II intron splicing.; CRM family member 2 (CFM2); FUNCTIONS IN: RNA binding; INVOLVED IN: Group I intron splicing, Group II intron splicing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: CRM family member 3B (TAIR:AT4G14510.1); Has 1269 Blast hits to 881 proteins in 154 species: Archae - 0; Bacteria - 46; Metazoa - 247; Fungi - 72; Plants - 683; Viruses - 4; Other Eukaryotes - 217 (source: NCBI BLink). & (gnl|cdd|37201 : 385.0) no description available & (gnl|cdd|85815 : 101.0) no description available & (reliability: 1824.0) & (original description: Putative CFM2, Description = CRM-domain containing factor CFM2, chloroplastic, PFAM = PF01985;PF01985;PF01985;PF01985)' T '35.2' 'not assigned.unknown' 'niben101scf06283_44221-52502' '(at4g25315 : 117.0) Expressed protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3128 (InterPro:IPR021475). & (reliability: 234.0) & (original description: Putative BnaC01g17260D, Description = BnaC01g17260D protein, PFAM = PF11326)' T '35.2' 'not assigned.unknown' 'niben101scf06286_71375-77349' '(at5g27990 : 103.0) Pre-rRNA-processing protein TSR2, conserved region; CONTAINS InterPro DOMAIN/s: Pre-rRNA-processing protein TSR2, conserved region (InterPro:IPR019398); BEST Arabidopsis thaliana protein match is: Pre-rRNA-processing protein TSR2, conserved region (TAIR:AT3G22510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative Os08g0508600, Description = Os08g0508600 protein, PFAM = PF10273)' T '35.2' 'not assigned.unknown' 'niben101scf06286_343256-346393' '(at1g26945 : 93.6) Encodes a basic helix-loop-helix (bHLH) protein involved in blue/far-red light signaling. Physically interacts with HFR1 and negatively regulates its activity.; KIDARI (KDR); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: response to light stimulus; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding family protein (TAIR:AT3G28857.1); Has 97 Blast hits to 97 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative PRE5, Description = Transcription factor PRE5, PFAM = PF00010)' T '35.2' 'not assigned.unknown' 'niben101scf06288_1734-4432' ' no hits & (original description: Putative MADSy8, Description = Type I MADS box transcription factor, PFAM = PF00319)' T '35.2' 'not assigned.unknown' 'niben101scf06291_397850-419222' '(at1g15780 : 458.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). & (reliability: 916.0) & (original description: Putative BnaC05g49890D, Description = BnaC05g49890D protein, PFAM = PF16987)' T '35.2' 'not assigned.unknown' 'niben101scf06305_95246-98805' '(at3g62450 : 107.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 35 Blast hits to 35 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative BnaC08g32240D, Description = BnaC08g32240D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06305_246530-250687' '(at3g19970 : 338.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF829, transmembrane 53 (InterPro:IPR008547); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G18245.1); Has 401 Blast hits to 400 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 180; Fungi - 77; Plants - 116; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|69240 : 165.0) no description available & (gnl|cdd|37732 : 140.0) no description available & (reliability: 676.0) & (original description: Putative KK1_008424, Description = Transmembrane protein 53, PFAM = PF05705)' T '35.2' 'not assigned.unknown' 'niben101scf06311_43935-46870' '(gnl|cdd|68427 : 236.0) no description available & (at1g07090 : 226.0) LIGHT SENSITIVE HYPOCOTYLS 6 (LSH6); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT5G58500.1); Has 311 Blast hits to 311 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative LSH6, Description = Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6, PFAM = PF04852)' T '35.2' 'not assigned.unknown' 'niben101scf06311_199946-202395' '(at2g30230 : 144.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06980.1); Has 167 Blast hits to 167 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative At2g30230, Description = Putative uncharacterized protein At2g30230, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf06318_70625-73380' ' no hits & (original description: Putative , Description = , PFAM = PF05097)' T '35.2' 'not assigned.unknown' 'niben101scf06323_107356-110582' ' no hits & (original description: Putative HMG1, Description = DNA-binding protein MNB1B, putative, PFAM = PF00505)' T '35.2' 'not assigned.unknown' 'niben101scf06326_50649-55754' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06332_395222-398079' ' no hits & (original description: Putative SDM1_53t00022, Description = Zinc finger containing preotein, putative, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben101scf06337_12491-14805' ' no hits & (original description: Putative orf105, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06344_778017-781279' '(at3g55350 : 115.0) PIF / Ping-Pong family of plant transposases; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G63270.1); Has 1213 Blast hits to 1213 proteins in 135 species: Archae - 0; Bacteria - 2; Metazoa - 520; Fungi - 50; Plants - 592; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative PGSC0003DMG400025940, Description = PIF / Ping-Pong family of plant transposases, PFAM = PF13359)' T '35.2' 'not assigned.unknown' 'niben101scf06345_17221-19916' '(at2g21990 : 246.0) Protein of unknown function, DUF617; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: sepal, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF617, plant (InterPro:IPR006460); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF617 (TAIR:AT4G39610.1); Has 257 Blast hits to 257 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68336 : 209.0) no description available & (reliability: 492.0) & (original description: Putative MIZ1, Description = Protein MIZU-KUSSEI 1, PFAM = PF04759)' T '35.2' 'not assigned.unknown' 'niben101scf06348_10354-49677' ' (original description: Putative CRF1, Description = Ethylene-responsive transcription factor RAP2-11, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'niben101scf06348_46887-52756' '(at1g01840 : 84.0) unknown protein; Has 23 Blast hits to 23 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 168.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06349_105183-108019' '(at1g23710 : 88.2) Protein of unknown function (DUF1645); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT1G70420.1); Has 288 Blast hits to 282 proteins in 52 species: Archae - 0; Bacteria - 6; Metazoa - 16; Fungi - 11; Plants - 191; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative , Description = , PFAM = PF07816)' T '35.2' 'not assigned.unknown' 'niben101scf06349_191664-199160' '(at5g14710 : 144.0) CONTAINS InterPro DOMAIN/s: Proteasome assembly chaperone 3 (InterPro:IPR018788); Has 120 Blast hits to 120 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 2; Plants - 49; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|40025 : 125.0) no description available & (reliability: 288.0) & (original description: Putative T9L3_10, Description = Proteasome assembly chaperone 3-domain protein, PFAM = PF10178)' T '35.2' 'not assigned.unknown' 'niben101scf06349_237910-240527' ' no hits & (original description: Putative PGSC0003DMG400000520, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06350_90041-95040' '(at2g27830 : 141.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits to 131 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06357_278916-285926' '(at4g35240 : 526.0) Protein of unknown function (DUF630 and DUF632); EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT2G17110.1). & (gnl|cdd|68357 : 330.0) no description available & (reliability: 1052.0) & (original description: Putative PGSC0003DMG400018656, Description = Putative uncharacterized protein At1g77500, PFAM = PF04783;PF04782)' T '35.2' 'not assigned.unknown' 'niben101scf06358_29666-32160' ' no hits & (original description: Putative PGSC0003DMG400024810, Description = Carboxypeptidase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06359_82197-85102' ' no hits & (original description: Putative BnaA05g34700D, Description = BnaA05g34700D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06361_153902-160095' '(at5g10060 : 357.0) ENTH/VHS family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT5G65180.1); Has 5399 Blast hits to 5001 proteins in 612 species: Archae - 19; Bacteria - 730; Metazoa - 2186; Fungi - 823; Plants - 382; Viruses - 37; Other Eukaryotes - 1222 (source: NCBI BLink). & (gnl|cdd|37880 : 229.0) no description available & (gnl|cdd|47880 : 105.0) no description available & (reliability: 714.0) & (original description: Putative glysoja_023001, Description = Regulation of nuclear pre-mRNA domain-containing protein 1B, PFAM = PF04818)' T '35.2' 'not assigned.unknown' 'niben101scf06365_46965-49192' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06365_137751-140361' ' no hits & (original description: Putative TCM_003181, Description = Defensin-like family protein, putative, PFAM = PF10868)' T '35.2' 'not assigned.unknown' 'niben101scf06369_85672-89556' ' no hits & (original description: Putative , Description = Putative hybrid signal transduction histidine kinase K-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06369_291880-294365' ' (original description: Putative grip22, Description = Ripening related protein family, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06369_342253-348124' ' no hits & (original description: Putative PGSC0003DMG401012214, Description = , PFAM = PF05278)' T '35.2' 'not assigned.unknown' 'niben101scf06369_384360-386876' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06369_504175-513648' '(at5g41270 : 118.0) CONTAINS InterPro DOMAIN/s: RNAse P, Rpr2/Rpp21 subunit (InterPro:IPR007175); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 236.0) & (original description: Putative F383_29939, Description = Zinc metalloprotease zmpB, PFAM = PF04032)' T '35.2' 'not assigned.unknown' 'niben101scf06369_547246-551720' '(at4g11450 : 351.0) Protein of unknown function (DUF3527); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3527 (InterPro:IPR021916); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3527) (TAIR:AT1G63520.1); Has 132 Blast hits to 129 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 702.0) & (original description: Putative , Description = Bromo-adjacent domain-containing protein, PFAM = PF12043)' T '35.2' 'not assigned.unknown' 'niben101scf06375_338564-341230' ' (original description: Putative glysoja_025782, Description = Copia-type polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06376_600131-604463' '(at4g35930 : 250.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G61340.1); Has 94 Blast hits to 94 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 500.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06382_439223-441444' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06383_38630-41067' ' no hits & (original description: Putative PGSC0003DMG400024775, Description = , PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf06387_13996-17020' ' no hits & (original description: Putative HMGIY2, Description = HMG-Y-related protein A, PFAM = PF00538;PF02178;PF02178;PF02178)' T '35.2' 'not assigned.unknown' 'niben101scf06388_12293-14745' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06388_60639-66229' '(q8s1z1|utp11_orysa : 218.0) Probable U3 small nucleolar RNA-associated protein 11 (U3 snoRNA-associated protein 11) - Oryza sativa (Rice) & (at3g60360 : 210.0) EMBRYO SAC DEVELOPMENT ARREST 14 (EDA14); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: megagametogenesis; LOCATED IN: small-subunit processome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp11 (InterPro:IPR007144); Has 434 Blast hits to 428 proteins in 209 species: Archae - 4; Bacteria - 1; Metazoa - 127; Fungi - 141; Plants - 59; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|67607 : 136.0) no description available & (gnl|cdd|38447 : 135.0) no description available & (reliability: 420.0) & (original description: Putative Os01g0810000, Description = Probable U3 small nucleolar RNA-associated protein 11, PFAM = PF03998)' T '35.2' 'not assigned.unknown' 'niben101scf06388_161893-170265' '(at5g27830 : 226.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Folate receptor, conserved region (InterPro:IPR018143). & (reliability: 452.0) & (original description: Putative Sb04g024600, Description = Putative uncharacterized protein Sb04g024600, PFAM = PF03024)' T '35.2' 'not assigned.unknown' 'niben101scf06388_219111-225927' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06392_121952-127146' '(at2g37110 : 290.0) PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT2G40935.1); Has 380 Blast hits to 379 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 19; Plants - 350; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|86720 : 86.5) no description available & (reliability: 580.0) & (original description: Putative CNR8, Description = Cell number regulator 8, PFAM = PF04749)' T '35.2' 'not assigned.unknown' 'niben101scf06392_360317-485038' ' no hits & (original description: Putative , Description = Putative replication protein A 70 kDa DNA-binding subunit B-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06394_332721-347309' '(at5g16210 : 1269.0) HEAT repeat-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), LisH dimerisation motif (InterPro:IPR006594), Armadillo-type fold (InterPro:IPR016024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35432 : 233.0) no description available & (reliability: 2538.0) & (original description: Putative BnaC02g06440D, Description = BnaC02g06440D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06394_393111-396789' '(at1g66840 : 178.0) Encodes a coiled-coil protein WEB2 (weak chloroplast movement under blue light 2, also named PMI2/plastid movement impaired 2). Involved in chloroplast avoidance movement under intermediate and high light intensities. WEB2, together with another coiled-coil protein WEB1 (AT2G26570), maintains the chloroplast photorelocation movement velocity.; Plant protein of unknown function (DUF827); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT5G38150.1); Has 84275 Blast hits to 48824 proteins in 2535 species: Archae - 1385; Bacteria - 13811; Metazoa - 38158; Fungi - 6970; Plants - 4830; Viruses - 207; Other Eukaryotes - 18914 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative PMI2, Description = Protein PLASTID MOVEMENT IMPAIRED 2, PFAM = PF05701)' T '35.2' 'not assigned.unknown' 'niben101scf06394_461659-464069' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06394_842650-846251' '(at5g38200 : 616.0) Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: glutamine metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Peptidase C26 (InterPro:IPR011697), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT1G66860.1); Has 3533 Blast hits to 3529 proteins in 1172 species: Archae - 17; Bacteria - 2871; Metazoa - 1; Fungi - 3; Plants - 53; Viruses - 0; Other Eukaryotes - 588 (source: NCBI BLink). & (gnl|cdd|73285 : 180.0) no description available & (reliability: 1232.0) & (original description: Putative At5g38200, Description = Class I glutamine amidotransferase-like protein, PFAM = PF07722)' T '35.2' 'not assigned.unknown' 'niben101scf06394_935887-938342' ' no hits & (original description: Putative TCM_019384, Description = 50S ribosomal protein-related, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06395_152833-156270' ' no hits & (original description: Putative Os10g0162100, Description = Os10g0162100 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06395_344854-353285' ' no hits & (original description: Putative PGSC0003DMG400030879, Description = Kinesin-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06397_68862-71908' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06397_145083-148782' ' no hits & (original description: Putative PGSC0003DMG400001743, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06400_118522-124685' '(at5g20680 : 571.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 16; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 14 (TAIR:AT5G64020.1); Has 1636 Blast hits to 1561 proteins in 93 species: Archae - 0; Bacteria - 11; Metazoa - 58; Fungi - 27; Plants - 1333; Viruses - 7; Other Eukaryotes - 200 (source: NCBI BLink). & (gnl|cdd|72785 : 130.0) no description available & (reliability: 1142.0) & (original description: Putative TBL14, Description = Protein trichome birefringence-like 14, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf06404_112641-115660' '(at2g45600 : 359.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G45610.1); Has 9264 Blast hits to 9243 proteins in 1540 species: Archae - 114; Bacteria - 5273; Metazoa - 690; Fungi - 865; Plants - 1337; Viruses - 3; Other Eukaryotes - 982 (source: NCBI BLink). & (gnl|cdd|36728 : 273.0) no description available & (gnl|cdd|87389 : 171.0) no description available & (q6l545|gid1_orysa : 140.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 718.0) & (original description: Putative CXE8, Description = Probable carboxylesterase 8, PFAM = PF07859)' T '35.2' 'not assigned.unknown' 'niben101scf06408_462677-468727' '(at5g01360 : 518.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 3 (TBL3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT3G55990.1); Has 1290 Blast hits to 1278 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 2; Plants - 1285; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 188.0) no description available & (reliability: 1036.0) & (original description: Putative TBL3, Description = Protein trichome birefringence-like 3, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf06408_488219-493122' '(at5g01350 : 82.8) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative PGSC0003DMG400011024, Description = BnaC03g00310D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06413_79509-88981' '(at5g16550 : 128.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative Sb07g020770, Description = Putative uncharacterized protein Sb07g020770, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06420_15110-27811' '(at2g23530 : 246.0) Zinc-finger domain of monoamine-oxidase A repressor R1; CONTAINS InterPro DOMAIN/s: Cell division cycle-associated protein (InterPro:IPR018866); BEST Arabidopsis thaliana protein match is: Zinc-finger domain of monoamine-oxidase A repressor R1 (TAIR:AT4G37110.1); Has 512 Blast hits to 506 proteins in 112 species: Archae - 0; Bacteria - 4; Metazoa - 144; Fungi - 73; Plants - 256; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative cdca7, Description = Cell division cycle-associated 7-like protein, PFAM = PF10497)' T '35.2' 'not assigned.unknown' 'niben101scf06423_255506-260096' '(at5g55860 : 166.0) Plant protein of unknown function (DUF827); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT1G12150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative Sb0011s005460, Description = Putative uncharacterized protein Sb0011s005460, PFAM = PF05701)' T '35.2' 'not assigned.unknown' 'niben101scf06423_291519-296059' '(at5g47740 : 143.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT2G45910.1). & (gnl|cdd|30176 : 82.2) no description available & (reliability: 286.0) & (original description: Putative glysoja_042007, Description = U-box domain-containing protein 33, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06423_320378-323566' '(at5g47740 : 157.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT2G45910.1). & (gnl|cdd|30176 : 81.9) no description available & (reliability: 314.0) & (original description: Putative BnaC02g33490D, Description = BnaC02g33490D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06424_86700-100156' ' (original description: Putative PI, Description = Miraculin homologue, PFAM = PF00197)' T '35.2' 'not assigned.unknown' 'niben101scf06430_11176-34451' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06431_129476-132263' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06432_390229-393327' '(q56s59|phyll_tobac : 95.1) Phylloplanin precursor (T-phylloplanin) - Nicotiana tabacum (Common tobacco) & (at3g16660 : 85.5) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT3G16670.1); Has 273 Blast hits to 210 proteins in 63 species: Archae - 0; Bacteria - 149; Metazoa - 42; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative At3g16670, Description = Phylloplanin, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06435_266774-269226' '(at5g66580 : 84.7) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative , Description = , PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf06435_433830-447898' '(at2g45000 : 321.0) EMBRYO DEFECTIVE 2766 (EMB2766); FUNCTIONS IN: structural constituent of nuclear pore; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, nuclear pore; CONTAINS InterPro DOMAIN/s: Nucleoporin, Nsp1-like, C-terminal (InterPro:IPR007758); Has 235342 Blast hits to 95277 proteins in 3388 species: Archae - 819; Bacteria - 58190; Metazoa - 65863; Fungi - 46438; Plants - 10106; Viruses - 2707; Other Eukaryotes - 51219 (source: NCBI BLink). & (gnl|cdd|37407 : 89.4) no description available & (reliability: 642.0) & (original description: Putative NbNup62b, Description = Nuclear pore complex protein Nup62b, PFAM = PF05064)' T '35.2' 'not assigned.unknown' 'niben101scf06435_446822-451540' '(at4g25170 : 84.3) Uncharacterised conserved protein (UCP012943); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP012943 (InterPro:IPR016606); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein (UCP012943) (TAIR:AT5G61490.1); Has 19 Blast hits to 19 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06436_233076-235994' ' no hits & (original description: Putative , Description = Remorin 2, PFAM = PF03766)' T '35.2' 'not assigned.unknown' 'niben101scf06436_330041-347294' '(at1g01730 : 88.2) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 1; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06437_185082-191604' '(at3g14850 : 453.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 41 (TBL41); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 38 (TAIR:AT1G29050.1); Has 1339 Blast hits to 1315 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1337; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 183.0) no description available & (reliability: 906.0) & (original description: Putative TBL41, Description = Protein trichome birefringence-like 41, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf06441_40710-46736' '(at1g11320 : 350.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 46 Blast hits to 46 proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 700.0) & (original description: Putative T28P6.3, Description = Putative uncharacterized protein At1g11320, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06442_66174-76915' '(at5g14600 : 441.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: tRNA (adenine-N1-)-methyltransferase activity; INVOLVED IN: tRNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: tRNA methyltransferase complex GCD14 subunit (InterPro:IPR014816); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|72128 : 402.0) no description available & (gnl|cdd|38126 : 368.0) no description available & (reliability: 882.0) & (original description: Putative cpd1, Description = tRNA methyltransferase complex GCD14 subunit, PFAM = PF08704)' T '35.2' 'not assigned.unknown' 'niben101scf06442_80854-83110' ' no hits & (original description: Putative orf120b, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06442_83111-85369' ' no hits & (original description: Putative orf121b, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06447_48616-51473' ' no hits & (original description: Putative , Description = , PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'niben101scf06448_13999-16415' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06454_926-3375' ' (original description: Putative Tgt1ORF2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf06454_131189-133662' ' no hits & (original description: Putative GDU1, Description = Protein GLUTAMINE DUMPER 3, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06461_416745-424198' '(at3g13060 : 394.0) evolutionarily conserved C-terminal region 5 (ECT5); CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 2 (TAIR:AT3G13460.4); Has 1288 Blast hits to 1234 proteins in 189 species: Archae - 0; Bacteria - 12; Metazoa - 605; Fungi - 140; Plants - 385; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink). & (gnl|cdd|37112 : 316.0) no description available & (gnl|cdd|67749 : 155.0) no description available & (reliability: 788.0) & (original description: Putative YTP13, Description = YTH domain-contained RNA binding protein 13, PFAM = PF04146)' T '35.2' 'not assigned.unknown' 'niben101scf06461_1003967-1007832' '(at1g19240 : 81.6) unknown protein; Has 24 Blast hits to 24 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative At1g19240, Description = Putative uncharacterized protein At1g19240, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06462_247376-256490' '(at3g43540 : 442.0) Protein of unknown function (DUF1350); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1350 (InterPro:IPR010765); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1350) (TAIR:AT5G47860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70542 : 138.0) no description available & (reliability: 884.0) & (original description: Putative At3g43540, Description = Putative eukaryotic initiation factor 4F subunit-like, PFAM = PF07082)' T '35.2' 'not assigned.unknown' 'niben101scf06466_29261-36165' '(at3g19540 : 686.0) Protein of unknown function (DUF620); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF620 (InterPro:IPR006873); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF620) (TAIR:AT1G49840.1); Has 219 Blast hits to 218 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 219; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68363 : 428.0) no description available & (reliability: 1372.0) & (original description: Putative At3g19540, Description = AT3g19540/T31J18_4, PFAM = PF04788)' T '35.2' 'not assigned.unknown' 'niben101scf06466_80628-85188' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06467_709165-712442' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06482_572426-575163' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06482_572435-575154' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06499_12074-17925' '(at1g73090 : 350.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages. & (reliability: 700.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06499_41510-46693' '(at3g21190 : 520.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G51630.1); Has 760 Blast hits to 758 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 760; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 138.0) no description available & (reliability: 1040.0) & (original description: Putative At3g21190, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T '35.2' 'not assigned.unknown' 'niben101scf06499_222936-225754' ' no hits & (original description: Putative COL13, Description = COL domain class transcription factor, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06501_154725-160237' '(at1g05370 : 466.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT3G22410.1); Has 487 Blast hits to 487 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 189; Plants - 251; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|36683 : 219.0) no description available & (gnl|cdd|47819 : 88.1) no description available & (reliability: 932.0) & (original description: Putative BnaC05g30180D, Description = BnaC05g30180D protein, PFAM = PF00650)' T '35.2' 'not assigned.unknown' 'niben101scf06506_232577-240591' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06508_394044-396527' ' no hits & (original description: Putative v1g59372, Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06509_49262-51636' ' no hits & (original description: Putative At2g06320, Description = Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06509_379292-381954' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06509_484842-487165' ' no hits & (original description: Putative PGSC0003DMG400000389, Description = , PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf06509_541383-572220' '(at2g19950 : 288.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC1 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (558-715 aa) portion of the protein.; golgin candidate 1 (GC1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus; CONTAINS InterPro DOMAIN/s: Golgin subfamily A member 5 (InterPro:IPR019177); BEST Arabidopsis thaliana protein match is: golgin candidate 2 (TAIR:AT1G18190.1). & (q5jly8|goga5_orysa : 259.0) Golgin-84 - Oryza sativa (Rice) & (reliability: 576.0) & (original description: Putative GC1, Description = Golgin-84, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06509_561989-574712' '(at2g19950 : 473.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC1 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (558-715 aa) portion of the protein.; golgin candidate 1 (GC1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus; CONTAINS InterPro DOMAIN/s: Golgin subfamily A member 5 (InterPro:IPR019177); BEST Arabidopsis thaliana protein match is: golgin candidate 2 (TAIR:AT1G18190.1). & (q5jly8|goga5_orysa : 421.0) Golgin-84 - Oryza sativa (Rice) & (reliability: 946.0) & (original description: Putative GC1, Description = Golgin candidate 1, PFAM = PF09787)' T '35.2' 'not assigned.unknown' 'niben101scf06512_292180-314613' ' (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06512_316584-318904' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06514_190487-193566' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06514_192626-196023' '(at5g16950 : 82.4) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 164.8) & (original description: Putative DPL1, Description = Putative uncharacterized protein DPL1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06514_290944-297133' '(at2g32280 : 181.0) Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT4G21310.1); Has 170 Blast hits to 169 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 362.0) & (original description: Putative At2g32280, Description = At2g32280, PFAM = PF06749)' T '35.2' 'not assigned.unknown' 'niben101scf06514_298625-301893' ' (original description: Putative STK, Description = Storekeeper protein, PFAM = PF04504)' T '35.2' 'not assigned.unknown' 'niben101scf06516_6891-24922' ' (original description: Putative LgRT8, Description = Reverse transcriptases, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf06525_381368-384864' '(gnl|cdd|66792 : 179.0) no description available & (at3g50150 : 114.0) Plant protein of unknown function (DUF247); INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50170.1); Has 1158 Blast hits to 1035 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1158; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative PGSC0003DMG400010632, Description = , PFAM = PF03140)' T '35.2' 'not assigned.unknown' 'niben101scf06529_6998-10421' ' no hits & (original description: Putative Tgt1ORF2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06529_466042-470317' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06530_88373-90840' ' no hits & (original description: Putative At2g06320, Description = Retroelement pol polyprotein-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06533_126516-131156' '(at1g12380 : 987.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62870.1); Has 173 Blast hits to 170 proteins in 34 species: Archae - 0; Bacteria - 4; Metazoa - 25; Fungi - 8; Plants - 123; Viruses - 7; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 1974.0) & (original description: Putative At1g12380, Description = F5O11.10, PFAM = PF04937)' T '35.2' 'not assigned.unknown' 'niben101scf06535_19707-55832' '(at1g48110 : 473.0) evolutionarily conserved C-terminal region 7 (ECT7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 6 (TAIR:AT3G17330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37112 : 346.0) no description available & (gnl|cdd|67749 : 158.0) no description available & (reliability: 946.0) & (original description: Putative ECT6, Description = At3g17330, PFAM = PF04146)' T '35.2' 'not assigned.unknown' 'niben101scf06542_3013-5778' ' no hits & (original description: Putative CV86, Description = Putative acetyl-CoA-benzylalcohol acetyltransferase-like, PFAM = PF02458)' T '35.2' 'not assigned.unknown' 'niben101scf06556_7829-16468' '(at5g49110 : 1036.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39753 : 611.0) no description available & (reliability: 2072.0) & (original description: Putative Os03g0341200, Description = Os03g0341200 protein, PFAM = PF14679;PF14678;PF14680;PF14675;PF14676)' T '35.2' 'not assigned.unknown' 'niben101scf06556_921684-924452' '(at3g06840 : 140.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49170.1); Has 33 Blast hits to 33 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06556_1082012-1091751' '(at3g16730 : 481.0) CONTAINS InterPro DOMAIN/s: Non-SMC condensin II complex, subunit H2-like (InterPro:IPR009378); Has 249 Blast hits to 211 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 8; Plants - 30; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|37570 : 350.0) no description available & (reliability: 962.0) & (original description: Putative CAPH2, Description = Condensin-2 complex subunit H2, PFAM = PF16858;PF16869;PF06278)' T '35.2' 'not assigned.unknown' 'niben101scf06562_249765-253394' '(at5g50410 : 94.4) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06565_571-6931' '(at5g05190 : 80.9) Protein of unknown function (DUF3133); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3133 (InterPro:IPR021480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3133) (TAIR:AT3G56410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative , Description = , PFAM = PF11331)' T '35.2' 'not assigned.unknown' 'niben101scf06570_224577-227882' ' no hits & (original description: Putative POPTR_0011s05400g, Description = Maturation protein pPM32, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06583_1-2450' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06583_531047-534324' ' no hits & (original description: Putative PGSC0003DMG400006243, Description = Putative Copper transport protein, PFAM = PF00403)' T '35.2' 'not assigned.unknown' 'niben101scf06588_355529-357810' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06590_158464-163163' '(at5g59990 : 119.0) CCT motif family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, stem, leaf whorl, flower; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT5G41380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative At5g41380, Description = CCT motif family protein, PFAM = PF06203)' T '35.2' 'not assigned.unknown' 'niben101scf06590_159362-163334' ' no hits & (original description: Putative glysoja_024661, Description = Zinc finger protein CONSTANS-LIKE 3, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06596_44666-47040' '(gnl|cdd|70386 : 125.0) no description available & (at2g21740 : 108.0) Protein of unknown function (DUF1278); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, egg cell; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1278 (InterPro:IPR010701); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1278) (TAIR:AT2G21750.1); Has 82 Blast hits to 82 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative EC1, Description = Egg cell-secreted protein 1.2, PFAM = PF05617)' T '35.2' 'not assigned.unknown' 'niben101scf06603_37695-42764' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06603_253028-259890' '(at2g38550 : 244.0) Transmembrane proteins 14C; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0136, Transmembrane (InterPro:IPR005349); BEST Arabidopsis thaliana protein match is: Transmembrane proteins 14C (TAIR:AT3G57280.1); Has 138 Blast hits to 137 proteins in 31 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 5; Plants - 115; Viruses - 7; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 488.0) & (original description: Putative FAX3, Description = Protein FATTY ACID EXPORT 3, chloroplastic, PFAM = PF03647)' T '35.2' 'not assigned.unknown' 'niben101scf06613_206762-219611' '(at5g27290 : 477.0) unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 199 Blast hits to 194 proteins in 57 species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 954.0) & (original description: Putative At5g27290, Description = At5g27290, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06614_1-16182' ' no hits & (original description: Putative F383_26226, Description = Transcription factor bHLH35-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06623_45451-48192' ' no hits & (original description: Putative PGSC0003DMG400005982, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06623_80182-87251' '(at2g21720 : 707.0) Plant protein of unknown function (DUF639); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF639 (InterPro:IPR006927); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF639) (TAIR:AT5G23390.1); Has 146 Blast hits to 143 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 142; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68417 : 605.0) no description available & (reliability: 1414.0) & (original description: Putative BnaC04g33280D, Description = BnaC04g33280D protein, PFAM = PF04842)' T '35.2' 'not assigned.unknown' 'niben101scf06625_160402-163250' ' no hits & (original description: Putative , Description = , PFAM = PF12937)' T '35.2' 'not assigned.unknown' 'niben101scf06625_182344-187579' '(at4g27720 : 769.0) Major facilitator superfamily protein; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G49310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39533 : 691.0) no description available & (gnl|cdd|86904 : 555.0) no description available & (reliability: 1538.0) & (original description: Putative MFSD5, Description = Major facilitator superfamily domain-containing protein 5, PFAM = PF05631)' T '35.2' 'not assigned.unknown' 'niben101scf06628_28685-31213' ' no hits & (original description: Putative orf210, Description = ORF-239, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06633_318815-328922' '(at5g53860 : 682.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; embryo defective 2737 (emb2737); INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 1364.0) & (original description: Putative glysoja_007802, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06641_169213-192044' '(gnl|cdd|37247 : 1305.0) no description available & (at1g10490 : 1217.0) CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1726 (InterPro:IPR013562), Domain of unknown function DUF699, exodeoxyribonuclease V alpha chain (InterPro:IPR007807); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF1726) ;Putative ATPase (DUF699) (TAIR:AT3G57940.1); Has 1351 Blast hits to 1310 proteins in 616 species: Archae - 139; Bacteria - 698; Metazoa - 170; Fungi - 143; Plants - 51; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|31633 : 509.0) no description available & (reliability: 2434.0) & (original description: Putative nat10, Description = N-acetyltransferase 10, PFAM = PF13725;PF13718;PF05127;PF08351)' T '35.2' 'not assigned.unknown' 'niben101scf06644_67551-69413' '(at5g24860 : 131.0) encodes a small protein of 12.6 kDa that regulates flowering and is involved in gibberellin signalling pathway. It is expressed in apical meristems immediately after the photoperiodic induction of flowering. Genetic interactions with flowering time and floral organ identity genes suggest that this gene may be involved in modulating the competence to flower. There are two other genes similar to FPF1, FLP1 (At4g31380) and FLP2 (no locus name yet, on BAC F8F16 on chr 4). This is so far a plant-specific gene and is only found in long-day mustard, arabidopsis, and rice.; FLOWERING PROMOTING FACTOR 1 (FPF1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to gibberellin stimulus, positive regulation of flower development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10625.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative RAA1, Description = Flowering-promoting factor 1-like protein 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06649_87320-110748' '(at2g47980 : 562.0) Essential to the monopolar orientation of the kinetochores during meiosis.; sister-chromatid cohesion protein 3 (SCC3); FUNCTIONS IN: binding; INVOLVED IN: mitosis, attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation, meiotic sister chromatid cohesion, centromeric; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), STAG (InterPro:IPR013721), Stromalin conservative domain (InterPro:IPR020839); Has 568 Blast hits to 559 proteins in 184 species: Archae - 0; Bacteria - 2; Metazoa - 324; Fungi - 134; Plants - 52; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|37222 : 391.0) no description available & (gnl|cdd|71942 : 135.0) no description available & (reliability: 1124.0) & (original description: Putative Sb05g025690, Description = Putative uncharacterized protein Sb05g025690, PFAM = PF08514)' T '35.2' 'not assigned.unknown' 'niben101scf06649_97547-108597' '(at2g47980 : 490.0) Essential to the monopolar orientation of the kinetochores during meiosis.; sister-chromatid cohesion protein 3 (SCC3); FUNCTIONS IN: binding; INVOLVED IN: mitosis, attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation, meiotic sister chromatid cohesion, centromeric; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), STAG (InterPro:IPR013721), Stromalin conservative domain (InterPro:IPR020839); Has 568 Blast hits to 559 proteins in 184 species: Archae - 0; Bacteria - 2; Metazoa - 324; Fungi - 134; Plants - 52; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|37222 : 143.0) no description available & (reliability: 980.0) & (original description: Putative SA, Description = Cohesin subunit SA-1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06650_690519-692887' '(gnl|cdd|71349 : 119.0) no description available & (at3g22540 : 117.0) Protein of unknown function (DUF1677); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1677, plant (InterPro:IPR012876); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1677) (TAIR:AT4G14819.1); Has 245 Blast hits to 245 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 245; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative , Description = , PFAM = PF07911)' T '35.2' 'not assigned.unknown' 'niben101scf06653_15298-17981' '(gnl|cdd|39574 : 97.1) no description available & (at3g12410 : 90.5) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G12460.1); Has 208 Blast hits to 196 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 197; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 181.0) & (original description: Putative Sb03g030200, Description = Putative uncharacterized protein Sb03g030200, PFAM = PF01612)' T '35.2' 'not assigned.unknown' 'niben101scf06653_313479-321737' '(at1g70160 : 871.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27020.1); Has 108 Blast hits to 108 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 1742.0) & (original description: Putative BnaC02g19650D, Description = BnaC02g19650D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06661_6676-18892' '(at3g58010 : 317.0) plastoglobulin 34kD (PGL34); FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: Plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT2G42130.4); Has 158 Blast hits to 158 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 6; Plants - 145; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 634.0) & (original description: Putative PAP13, Description = Probable plastid-lipid-associated protein 13, chloroplastic, PFAM = PF04755)' T '35.2' 'not assigned.unknown' 'niben101scf06661_287732-291260' ' no hits & (original description: Putative LE25, Description = 18 kDa seed maturation protein, PFAM = PF03760)' T '35.2' 'not assigned.unknown' 'niben101scf06661_343709-347333' ' no hits & (original description: Putative GMPM1, Description = 18 kDa seed maturation protein, PFAM = PF03760)' T '35.2' 'not assigned.unknown' 'niben101scf06661_439256-446053' '(at1g51130 : 307.0) Nse4, component of Smc5/6 DNA repair complex; CONTAINS InterPro DOMAIN/s: Nse4 (InterPro:IPR014854); BEST Arabidopsis thaliana protein match is: Nse4, component of Smc5/6 DNA repair complex (TAIR:AT3G20760.1); Has 297 Blast hits to 295 proteins in 132 species: Archae - 0; Bacteria - 0; Metazoa - 72; Fungi - 132; Plants - 74; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|38077 : 188.0) no description available & (gnl|cdd|72167 : 114.0) no description available & (reliability: 614.0) & (original description: Putative NSE4A, Description = Non-structural maintenance of chromosomes element 4 homolog A, PFAM = PF08743)' T '35.2' 'not assigned.unknown' 'niben101scf06662_233645-239368' ' no hits & (original description: Putative At5g47455, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06662_285221-292884' '(at4g16650 : 762.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G76270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|66790 : 508.0) no description available & (reliability: 1524.0) & (original description: Putative axi 1, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T '35.2' 'not assigned.unknown' 'niben101scf06668_291370-300502' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06671_100570-103677' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06671_193784-198671' '(at1g64080 : 80.9) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52870.1); Has 1546 Blast hits to 738 proteins in 176 species: Archae - 0; Bacteria - 143; Metazoa - 278; Fungi - 131; Plants - 95; Viruses - 4; Other Eukaryotes - 895 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative MTR_1g099550, Description = Membrane-associated kinase regulator, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06674_66589-70278' '(at2g22370 : 351.0) unknown protein; Has 127 Blast hits to 127 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 87; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|38474 : 236.0) no description available & (reliability: 702.0) & (original description: Putative MED18, Description = Mediator of RNA polymerase II transcription subunit 18, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06674_293321-318703' '(at5g15680 : 3547.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37036 : 1843.0) no description available & (reliability: 7094.0) & (original description: Putative At5g15680, Description = Cell morphogenesis related protein, PFAM = PF14225;PF14222;PF14228)' T '35.2' 'not assigned.unknown' 'niben101scf06674_493099-519616' '(at5g38880 : 958.0) unknown protein; Has 474 Blast hits to 433 proteins in 138 species: Archae - 6; Bacteria - 80; Metazoa - 195; Fungi - 44; Plants - 59; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (reliability: 1916.0) & (original description: Putative 38565, Description = AUGMIN subunit 5, PFAM = PF14817)' T '35.2' 'not assigned.unknown' 'niben101scf06677_56927-59502' '(at4g19100 : 153.0) Protein of unknown function (DUF3464); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3464 (InterPro:IPR021855); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3464) (TAIR:AT5G52780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative PAM68, Description = ABC-type Co2+ transport system, permease component, PFAM = PF11947)' T '35.2' 'not assigned.unknown' 'niben101scf06678_108393-113999' '(at5g20270 : 352.0) heptahelical transmembrane protein homologous to human adiponectin receptors and progestin receptors; heptahelical transmembrane protein1 (HHP1); FUNCTIONS IN: receptor activity; INVOLVED IN: response to salt stress, response to hormone stimulus, response to sucrose stimulus; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hly-III related (InterPro:IPR004254); BEST Arabidopsis thaliana protein match is: heptahelical transmembrane protein2 (TAIR:AT4G30850.2); Has 2727 Blast hits to 2656 proteins in 794 species: Archae - 0; Bacteria - 1143; Metazoa - 823; Fungi - 356; Plants - 236; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (gnl|cdd|35967 : 253.0) no description available & (gnl|cdd|86213 : 144.0) no description available & (reliability: 704.0) & (original description: Putative HHP1, Description = Heptahelical transmembrane protein 1, PFAM = PF03006)' T '35.2' 'not assigned.unknown' 'niben101scf06678_469950-472933' ' no hits & (original description: Putative def7, Description = Defensin, PFAM = PF00304)' T '35.2' 'not assigned.unknown' 'niben101scf06683_183557-186301' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06683_368415-371549' '(at4g17940 : 159.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G20190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative F383_21388, Description = Adenosine monophosphate-protein transferase FICD, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06683_609154-617099' '(at2g42670 : 331.0) Protein of unknown function (DUF1637); FUNCTIONS IN: cysteamine dioxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1637 (InterPro:IPR012864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1637) (TAIR:AT3G58670.3); Has 366 Blast hits to 366 proteins in 96 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|39482 : 294.0) no description available & (gnl|cdd|71286 : 293.0) no description available & (reliability: 662.0) & (original description: Putative PCO4, Description = Plant cysteine oxidase 4, PFAM = PF07847)' T '35.2' 'not assigned.unknown' 'niben101scf06684_196768-199349' '(at5g52780 : 110.0) Protein of unknown function (DUF3464); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3464 (InterPro:IPR021855); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3464) (TAIR:AT4G19100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative PGSC0003DMG400009497, Description = Putative uncharacterized protein Sb01g030700, PFAM = PF11947)' T '35.2' 'not assigned.unknown' 'niben101scf06685_8764-12026' ' no hits & (original description: Putative ERN1, Description = Ethylene-responsive nuclear protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06687_150731-161862' '(at1g73470 : 292.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 584.0) & (original description: Putative Sb02g026190, Description = Putative uncharacterized protein Sb02g026190, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06691_37540-68111' ' no hits & (original description: Putative PGSC0003DMG400028277, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06698_302315-307272' '(at5g11640 : 213.0) Thioredoxin superfamily protein; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36132 : 177.0) no description available & (gnl|cdd|48511 : 138.0) no description available & (reliability: 426.0) & (original description: Putative BnaA10g20930D, Description = BnaA10g20930D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06700_45659-48290' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06708_258097-260492' ' no hits & (original description: Putative ELF4, Description = Early flowering protein, PFAM = PF07011)' T '35.2' 'not assigned.unknown' 'niben101scf06708_304998-308529' ' no hits & (original description: Putative HyPRP4, Description = At2g45180, PFAM = PF14547)' T '35.2' 'not assigned.unknown' 'niben101scf06708_367810-370174' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06716_194592-198256' ' no hits & (original description: Putative PSRP5, Description = 50S ribosomal protein 5 alpha, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06720_8491-12470' '(at5g27330 : 169.0) Prefoldin chaperone subunit family protein; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35383 : 85.3) no description available & (reliability: 338.0) & (original description: Putative PGSC0003DMG400001646, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06720_142618-145269' '(at5g50090 : 122.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative , Description = Serine/threonine-protein kinase TAO3, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf06725_240915-256232' '(at5g55820 : 137.0) CONTAINS InterPro DOMAIN/s: Inner centromere protein, ARK-binding region (InterPro:IPR005635); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative F383_15944, Description = Acetate kinase, PFAM = PF03941)' T '35.2' 'not assigned.unknown' 'niben101scf06734_238489-242835' '(at1g60060 : 290.0) Serine/threonine-protein kinase WNK (With No Lysine)-related; BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase WNK (With No Lysine)-related (TAIR:AT5G53900.2); Has 3565 Blast hits to 2565 proteins in 80 species: Archae - 0; Bacteria - 3; Metazoa - 15; Fungi - 88; Plants - 227; Viruses - 0; Other Eukaryotes - 3232 (source: NCBI BLink). & (reliability: 580.0) & (original description: Putative At1g60060, Description = Predicted protein, PFAM = PF14215)' T '35.2' 'not assigned.unknown' 'niben101scf06736_19588-22727' '(at4g20190 : 113.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44660.1); Has 271 Blast hits to 209 proteins in 52 species: Archae - 0; Bacteria - 15; Metazoa - 63; Fungi - 14; Plants - 48; Viruses - 3; Other Eukaryotes - 128 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06736_134224-138948' '(at4g20170 : 581.0) Domain of unknown function (DUF23); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF23) (TAIR:AT5G44670.1); Has 199 Blast hits to 199 proteins in 36 species: Archae - 0; Bacteria - 27; Metazoa - 44; Fungi - 2; Plants - 116; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|85620 : 110.0) no description available & (gnl|cdd|39932 : 101.0) no description available & (reliability: 1162.0) & (original description: Putative GALS2, Description = Galactan beta-1,4-galactosyltransferase GALS2, PFAM = PF01697)' T '35.2' 'not assigned.unknown' 'niben101scf06736_443359-450644' '(at5g04460 : 108.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Ring/U-Box superfamily protein (TAIR:AT2G27950.1). & (reliability: 216.0) & (original description: Putative Os07g0499800, Description = Putative ovule protein, PFAM = PF13920)' T '35.2' 'not assigned.unknown' 'niben101scf06736_741525-744406' '(at4g25660 : 182.0) PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT4G25680.1); Has 753 Blast hits to 753 proteins in 154 species: Archae - 0; Bacteria - 0; Metazoa - 205; Fungi - 55; Plants - 348; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink). & (gnl|cdd|35545 : 115.0) no description available & (gnl|cdd|69428 : 110.0) no description available & (reliability: 364.0) & (original description: Putative , Description = Putative deSI-like protein-like, PFAM = PF05903)' T '35.2' 'not assigned.unknown' 'niben101scf06737_43553-52255' '(at3g48380 : 771.0) Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 (InterPro:IPR012462). & (gnl|cdd|37644 : 348.0) no description available & (gnl|cdd|87400 : 240.0) no description available & (reliability: 1542.0) & (original description: Putative ufsp1, Description = Ufm1-specific protease 2, PFAM = PF07910)' T '35.2' 'not assigned.unknown' 'niben101scf06738_43805-46584' '(gnl|cdd|68336 : 239.0) no description available & (at2g41660 : 237.0) Essential for hydrotropism in roots. Mutant roots are defective in hydrotropism, and have slightly reduced phototropism and modified wavy growth response. Has normal gravitropism and root elongation.; mizu-kussei 1 (MIZ1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF617, plant (InterPro:IPR006460); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF617 (TAIR:AT3G25640.1); Has 258 Blast hits to 256 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 258; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 474.0) & (original description: Putative MIZ1, Description = BnaA06g33470D protein, PFAM = PF04759)' T '35.2' 'not assigned.unknown' 'niben101scf06738_301852-307030' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06739_171106-174712' ' no hits & (original description: Putative BnaC05g14900D, Description = BnaC05g14900D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06739_418214-420654' ' no hits & (original description: Putative PGSC0003DMG400006837, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06743_55422-62223' '(at2g34570 : 222.0) maternal effect embryo arrest 21 (MEE21); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF652 (InterPro:IPR006984); Has 718 Blast hits to 716 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 246; Fungi - 251; Plants - 108; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (gnl|cdd|38374 : 177.0) no description available & (reliability: 444.0) & (original description: Putative X6b, Description = Putative uncharacterized protein X6b, PFAM = PF04900)' T '35.2' 'not assigned.unknown' 'niben101scf06745_18405-37536' ' no hits & (original description: Putative PGSC0003DMG400024465, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06750_1-10946' ' (original description: Putative PGSC0003DMG400000869, Description = Polyvinylalcohol dehydrogenase, PFAM = PF13360;PF13360;PF01011)' T '35.2' 'not assigned.unknown' 'niben101scf06752_4304-9916' '(at5g13500 : 513.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1026.0) & (original description: Putative RDN1, Description = Root determined nodulation 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06753_21995-24633' ' (original description: Putative Os02g0661800, Description = Os02g0661800 protein, PFAM = PF01569)' T '35.2' 'not assigned.unknown' 'niben101scf06753_71221-74111' '(at1g62520 : 230.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12450.1); Has 388 Blast hits to 388 proteins in 26 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 8; Plants - 376; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 460.0) & (original description: Putative At1g62520, Description = Putative uncharacterized protein At1g62520, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06753_213738-261028' '(at4g22600 : 174.0) unknown protein; Has 26 Blast hits to 26 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative PGSC0003DMG400004793, Description = Seed dormancy control protein, PFAM = PF14144)' T '35.2' 'not assigned.unknown' 'niben101scf06754_1661-4669' ' no hits & (original description: Putative , Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06761_75683-84291' '(at5g25265 : 577.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: cultured cell, leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1154.0) & (original description: Putative RDN1, Description = Root determined nodulation 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06763_37649-40071' ' no hits & (original description: Putative TCM_012230, Description = Mediator of RNA polymerase II transcription subunit 13, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06769_101040-104014' ' no hits & (original description: Putative PSK1, Description = Phytosulfokine 3, putative, PFAM = PF06404)' T '35.2' 'not assigned.unknown' 'niben101scf06770_44091-46195' ' (original description: Putative orf297a, Description = Orf297a protein, PFAM = PF03175;PF03175)' T '35.2' 'not assigned.unknown' 'niben101scf06772_254576-257010' '(at2g01300 : 129.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15010.1); Has 73 Blast hits to 73 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative BnaC05g11320D, Description = BnaC05g11320D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06778_284844-287785' '(at5g10750 : 357.0) Protein of unknown function (DUF1336); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT5G24990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70520 : 229.0) no description available & (reliability: 714.0) & (original description: Putative EDR2, Description = Pleckstrin-like (PH) and lipid-binding START domain protein, PFAM = PF07059)' T '35.2' 'not assigned.unknown' 'niben101scf06788_91655-94357' ' (original description: Putative ERF1, Description = Ethylene response factor ERF1, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'niben101scf06789_94003-148179' '(at5g26230 : 127.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative MAKR1, Description = Probable membrane-associated kinase regulator 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06789_318975-321070' '(at3g05980 : 135.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19340.1); Has 202 Blast hits to 202 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 4; Plants - 148; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative BnaA03g07550D, Description = BnaA03g07550D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06789_518620-528457' '(at5g19300 : 434.0) CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Protein of unknown function DUF171 (InterPro:IPR003750); Has 3649 Blast hits to 1964 proteins in 291 species: Archae - 113; Bacteria - 121; Metazoa - 1082; Fungi - 399; Plants - 227; Viruses - 4; Other Eukaryotes - 1703 (source: NCBI BLink). & (gnl|cdd|39128 : 331.0) no description available & (gnl|cdd|86046 : 307.0) no description available & (reliability: 868.0) & (original description: Putative CI114, Description = C9orf114, PFAM = PF02598)' T '35.2' 'not assigned.unknown' 'niben101scf06799_370646-373119' ' no hits & (original description: Putative PGSC0003DMG402013972, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06806_169003-171344' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06806_369277-371984' ' (original description: Putative glysoja_044264, Description = Transposon TX1 putative 149 kDa protein, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf06807_117088-121738' ' no hits & (original description: Putative PGSC0003DMG400004191, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06809_45771-48229' '(at2g20940 : 111.0) Protein of unknown function (DUF1279); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1279 (InterPro:IPR009688); Has 228 Blast hits to 228 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 92; Fungi - 41; Plants - 76; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 222.0) & (original description: Putative At2g20940, Description = At2g20940, PFAM = PF06916)' T '35.2' 'not assigned.unknown' 'niben101scf06809_81637-87090' '(at5g47900 : 269.0) Protein of unknown function (DUF1624); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1624 (InterPro:IPR012429); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1624) (TAIR:AT5G27730.1). & (gnl|cdd|39881 : 189.0) no description available & (reliability: 538.0) & (original description: Putative ophh-57A, Description = Putative uncharacterized protein ophh-57A, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06812_74277-78458' '(at2g23790 : 296.0) Protein of unknown function (DUF607); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF607 (InterPro:IPR006769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF607) (TAIR:AT4G36820.1); Has 364 Blast hits to 364 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 147; Fungi - 45; Plants - 131; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|38177 : 296.0) no description available & (gnl|cdd|68256 : 235.0) no description available & (reliability: 592.0) & (original description: Putative At4g36820, Description = Calcium uniporter protein 1, mitochondrial, PFAM = PF04678)' T '35.2' 'not assigned.unknown' 'niben101scf06819_26541-29618' ' no hits & (original description: Putative PGSC0003DMG400020057, Description = Fra e 6.01 allergen, PFAM = PF09253)' T '35.2' 'not assigned.unknown' 'niben101scf06819_75444-78046' ' no hits & (original description: Putative F383_09440, Description = Ribosomal N-lysine methyltransferase 5, PFAM = PF15365)' T '35.2' 'not assigned.unknown' 'niben101scf06822_49576-56726' '(at4g17970 : 654.0) Anion transporter involved in stomatal closure. Gene has 3 splicing variants.; "aluminum-activated, malate transporter 12" (ALMT12); CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT5G46610.1); Has 747 Blast hits to 732 proteins in 202 species: Archae - 0; Bacteria - 352; Metazoa - 0; Fungi - 13; Plants - 354; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|39909 : 451.0) no description available & (gnl|cdd|85194 : 179.0) no description available & (reliability: 1308.0) & (original description: Putative ALMT12, Description = Aluminum-activated malate transporter 12, PFAM = PF11744)' T '35.2' 'not assigned.unknown' 'niben101scf06822_326665-336831' '(at4g17840 : 432.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 864.0) & (original description: Putative BnaC04g09850D, Description = BnaC04g09850D protein, PFAM = PF02517)' T '35.2' 'not assigned.unknown' 'niben101scf06822_356206-361159' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06822_404908-407654' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06822_409027-411567' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06823_1145-4206' '(at4g33890 : 224.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative At2g14850, Description = Putative uncharacterized protein At2g14850, PFAM = PF12767)' T '35.2' 'not assigned.unknown' 'niben101scf06823_7386-10360' ' no hits & (original description: Putative Dif54, Description = Extensin-like protein Dif54, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06823_56025-61846' '(at1g49870 : 405.0) unknown protein; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 810.0) & (original description: Putative TCM_007196, Description = Uncharacterized protein isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06825_45015-53140' '(at1g73390 : 651.0) Endosomal targeting BRO1-like domain-containing protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); BEST Arabidopsis thaliana protein match is: Endosomal targeting BRO1-like domain-containing protein (TAIR:AT1G17940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1302.0) & (original description: Putative At5g14020, Description = Endosomal targeting BRO1-like domain-containing protein, PFAM = PF03097)' T '35.2' 'not assigned.unknown' 'niben101scf06825_69067-74001' '(at1g73380 : 361.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1308 (InterPro:IPR010733); Has 162 Blast hits to 160 proteins in 67 species: Archae - 0; Bacteria - 2; Metazoa - 120; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|39729 : 246.0) no description available & (gnl|cdd|70465 : 122.0) no description available & (reliability: 722.0) & (original description: Putative , Description = , PFAM = PF07000)' T '35.2' 'not assigned.unknown' 'niben101scf06825_76053-80578' '(at4g39630 : 187.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative TCM_001216, Description = Translation initiation factor IF-2, putative isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06825_159848-164333' '(at1g28150 : 102.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 96 Blast hits to 96 proteins in 44 species: Archae - 0; Bacteria - 56; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative At1g28150, Description = UPF0426 protein At1g28150, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06825_229987-236976' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06825_272551-284798' ' no hits & (original description: Putative Os10g0492800, Description = Os10g0492800 protein, PFAM = PF00149)' T '35.2' 'not assigned.unknown' 'niben101scf06826_551694-563230' '(at3g22270 : 685.0) Topoisomerase II-associated protein PAT1; BEST Arabidopsis thaliana protein match is: Topoisomerase II-associated protein PAT1 (TAIR:AT4G14990.1); Has 263 Blast hits to 260 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 98; Fungi - 15; Plants - 121; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (reliability: 1370.0) & (original description: Putative Sb03g035750, Description = Putative uncharacterized protein Sb03g035750, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06829_266751-268284' ' no hits & (original description: Putative PGSC0003DMG400021290, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06829_278728-281786' ' no hits & (original description: Putative BA19, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223;PF13961)' T '35.2' 'not assigned.unknown' 'niben101scf06829_414841-472239' '(at5g08320 : 138.0) CONTAINS InterPro DOMAIN/s: E2F-associated phosphoprotein, C-terminal (InterPro:IPR019370); Has 149 Blast hits to 149 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (gnl|cdd|38605 : 93.7) no description available & (reliability: 276.0) & (original description: Putative pfd5, Description = Prefoldin 5, PFAM = PF10238)' T '35.2' 'not assigned.unknown' 'niben101scf06836_238945-241415' '(gnl|cdd|68105 : 90.9) no description available & (at4g04630 : 89.4) Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT4G21970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative PGSC0003DMG400016480, Description = Actin cytoskeleton-regulatory complex protein end3, putative isoform 7, PFAM = PF04520)' T '35.2' 'not assigned.unknown' 'niben101scf06837_32634-40247' '(gnl|cdd|39258 : 88.7) no description available & (at2g15270 : 86.7) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1168 (InterPro:IPR009548); Has 1930 Blast hits to 1364 proteins in 219 species: Archae - 0; Bacteria - 44; Metazoa - 762; Fungi - 280; Plants - 96; Viruses - 3; Other Eukaryotes - 745 (source: NCBI BLink). & (gnl|cdd|87124 : 81.4) no description available & (reliability: 173.4) & (original description: Putative RCOM_0811390, Description = Expressed protein, putative, PFAM = PF06658)' T '35.2' 'not assigned.unknown' 'niben101scf06848_418832-429441' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06851_171226-174773' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06852_259082-261465' ' no hits & (original description: Putative BnaA05g02670D, Description = BnaA05g02670D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06853_2743-20507' '(at3g07660 : 394.0) Kinase-related protein of unknown function (DUF1296); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1296 (InterPro:IPR009719); BEST Arabidopsis thaliana protein match is: Kinase-related protein of unknown function (DUF1296) (TAIR:AT3G13990.1); Has 3086 Blast hits to 1914 proteins in 327 species: Archae - 2; Bacteria - 372; Metazoa - 1089; Fungi - 466; Plants - 245; Viruses - 13; Other Eukaryotes - 899 (source: NCBI BLink). & (gnl|cdd|70439 : 106.0) no description available & (reliability: 788.0) & (original description: Putative GIP1, Description = GBF-interacting protein 1, PFAM = PF06972)' T '35.2' 'not assigned.unknown' 'niben101scf06855_106465-114728' '(at5g13610 : 422.0) Protein of unknown function (DUF155); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF155 (InterPro:IPR003734); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF155) (TAIR:AT1G69380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38072 : 274.0) no description available & (gnl|cdd|31909 : 102.0) no description available & (reliability: 844.0) & (original description: Putative pco138889, Description = AT5g13610/MSH12_7, PFAM = PF02582)' T '35.2' 'not assigned.unknown' 'niben101scf06855_272900-286297' '(at3g54970 : 306.0) D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29567 : 100.0) no description available & (reliability: 612.0) & (original description: Putative BnaA09g55000D, Description = BnaA09g55000D protein, PFAM = PF01063)' T '35.2' 'not assigned.unknown' 'niben101scf06866_287364-294218' ' (original description: Putative ZOSMA_123G00390, Description = Protein SMG9, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06869_249149-279121' '(at1g76850 : 1159.0) Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.; exocyst complex component sec5 (SEC5A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen germination, pollen tube growth; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Exocyst complex component SEC5 (TAIR:AT1G21170.1); Has 532 Blast hits to 503 proteins in 167 species: Archae - 0; Bacteria - 2; Metazoa - 234; Fungi - 147; Plants - 83; Viruses - 4; Other Eukaryotes - 62 (source: NCBI BLink). & (gnl|cdd|37558 : 683.0) no description available & (reliability: 2318.0) & (original description: Putative SEC5B, Description = Exocyst complex component SEC5B, PFAM = PF15469)' T '35.2' 'not assigned.unknown' 'niben101scf06884_209604-211898' ' no hits & (original description: Putative orf158, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06888_193428-195970' '(at4g14870 : 84.7) Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid.; secE/sec61-gamma protein transport protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, protein secretion, protein targeting; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein secE/sec61-gamma protein (InterPro:IPR001901), SecE subunit of protein translocation complex (InterPro:IPR005807); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative SECE1, Description = Preprotein translocase subunit SECE1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06890_183247-188225' '(at4g24200 : 227.0) Transcription elongation factor (TFIIS) family protein; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923); Has 1174 Blast hits to 562 proteins in 174 species: Archae - 0; Bacteria - 342; Metazoa - 163; Fungi - 176; Plants - 109; Viruses - 0; Other Eukaryotes - 384 (source: NCBI BLink). & (reliability: 454.0) & (original description: Putative PGSC0003DMG400029336, Description = BnaC07g38790D protein, PFAM = PF08711)' T '35.2' 'not assigned.unknown' 'niben101scf06901_12346-15501' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06901_50276-52704' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06901_116934-123112' '(at3g22990 : 551.0) Armadillo-repeat containing protein. Involved in leaf and flower development. Located in nucleus. Broadly expressed throughout vegetative and floral tissues.; LEAF AND FLOWER RELATED (LFR); FUNCTIONS IN: binding; INVOLVED IN: flower development, leaf development; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); Has 69 Blast hits to 69 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 37; Fungi - 2; Plants - 25; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 1102.0) & (original description: Putative LFR, Description = Armadillo repeat-containing protein LFR, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06906_11190-13792' '(at4g37810 : 97.1) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 194.2) & (original description: Putative EPFL2, Description = Epidermal patterning factor-like protein, PFAM = PF17181)' T '35.2' 'not assigned.unknown' 'niben101scf06906_143252-147450' ' (original description: Putative PGSC0003DMG400030665, Description = Putative dentin sialophosphoprotein-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06909_143482-153512' '(at3g51580 : 120.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages. & (reliability: 240.0) & (original description: Putative BnaA09g21410D, Description = BnaA09g21410D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06909_461119-539015' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06912_216593-221666' '(at1g73970 : 693.0) unknown protein; Has 34 Blast hits to 33 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 1386.0) & (original description: Putative TCM_044372, Description = ATP-binding cassette sub-family A member 13, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06914_68258-71930' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06916_157241-160452' '(at5g48040 : 459.0) Ubiquitin carboxyl-terminal hydrolase family protein; CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant (InterPro:IPR021099); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein (TAIR:AT3G58520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 918.0) & (original description: Putative F383_10704, Description = Pesticidal crystal cry1Jb, PFAM = PF11955)' T '35.2' 'not assigned.unknown' 'niben101scf06919_76291-80917' '(at5g48385 : 548.0) FRIGIDA-like protein; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT4G14900.1); Has 1269 Blast hits to 1187 proteins in 101 species: Archae - 0; Bacteria - 22; Metazoa - 72; Fungi - 9; Plants - 1133; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (gnl|cdd|71337 : 335.0) no description available & (reliability: 1096.0) & (original description: Putative FRL3, Description = FRIGIDA-like protein 3, PFAM = PF07899)' T '35.2' 'not assigned.unknown' 'niben101scf06923_25494-29092' ' no hits & (original description: Putative PGSC0003DMG400026237, Description = BnaC04g55130D protein, PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben101scf06926_16294-21229' '(at2g40095 : 176.0) Alpha/beta hydrolase related protein; CONTAINS InterPro DOMAIN/s: MENTAL domain (InterPro:IPR019498); BEST Arabidopsis thaliana protein match is: Alpha/beta hydrolase related protein (TAIR:AT3G55880.2); Has 87 Blast hits to 87 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative At1g80280, Description = Alpha/beta hydrolase related protein, PFAM = PF10457)' T '35.2' 'not assigned.unknown' 'niben101scf06926_794852-799012' '(at3g51890 : 162.0) Clathrin light chain protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: clathrin coat of trans-Golgi network vesicle, clathrin coat of coated pit; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin light chain (InterPro:IPR000996); BEST Arabidopsis thaliana protein match is: Clathrin light chain protein (TAIR:AT2G40060.1); Has 358 Blast hits to 358 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 147; Fungi - 68; Plants - 116; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative At3g51890, Description = Clathrin light chain 3, PFAM = PF01086)' T '35.2' 'not assigned.unknown' 'niben101scf06933_348459-350883' ' no hits & (original description: Putative BnaC05g30360D, Description = BnaA05g17390D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06933_352369-355639' ' no hits & (original description: Putative , Description = , PFAM = PF12734)' T '35.2' 'not assigned.unknown' 'niben101scf06936_377189-408425' '(at3g03560 : 481.0) unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23490.1); Has 157 Blast hits to 146 proteins in 38 species: Archae - 3; Bacteria - 14; Metazoa - 8; Fungi - 0; Plants - 120; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 962.0) & (original description: Putative Sb10g027040, Description = Putative uncharacterized protein Sb10g027040, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06939_62432-64882' ' no hits & (original description: Putative , Description = , PFAM = PF02298)' T '35.2' 'not assigned.unknown' 'niben101scf06942_153117-167903' '(at1g07060 : 127.0) unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative PGSC0003DMG400030457, Description = Putative uncharacterized protein At1g07060, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06954_445272-450068' '(at5g49210 : 94.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative At5g49210, Description = AT5g49210/K21P3_8, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06955_139067-146955' '(at3g16270 : 645.0) ENTH/VHS family protein; INVOLVED IN: intracellular protein transport; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), Epsin, N-terminal (InterPro:IPR001026), ENTH/VHS (InterPro:IPR008942); Has 168 Blast hits to 159 proteins in 72 species: Archae - 0; Bacteria - 9; Metazoa - 51; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|48666 : 151.0) no description available & (reliability: 1290.0) & (original description: Putative At3g16270, Description = VHS domain-containing protein At3g16270, PFAM = PF01417)' T '35.2' 'not assigned.unknown' 'niben101scf06957_54197-57342' ' no hits & (original description: Putative , Description = , PFAM = PF00646)' T '35.2' 'not assigned.unknown' 'niben101scf06966_46946-52695' '(at2g44820 : 102.0) unknown protein; Has 70 Blast hits to 70 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 4; Plants - 47; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative , Description = , PFAM = PF15375)' T '35.2' 'not assigned.unknown' 'niben101scf06966_298345-300647' '(gnl|cdd|70386 : 97.9) no description available & (at4g39340 : 93.6) Protein of unknown function (DUF1278); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1278 (InterPro:IPR010701); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1278) (TAIR:AT2G21750.1); Has 101 Blast hits to 101 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative At2g21740, Description = BnaA04g12440D protein, PFAM = PF05617)' T '35.2' 'not assigned.unknown' 'niben101scf06966_310234-312632' '(gnl|cdd|70386 : 129.0) no description available & (at1g76750 : 120.0) Protein of unknown function (DUF1278); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1278 (InterPro:IPR010701); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1278) (TAIR:AT4G39340.1); Has 86 Blast hits to 86 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative EC1, Description = Prolamin-like domain-containing protein, PFAM = PF05617)' T '35.2' 'not assigned.unknown' 'niben101scf06976_36954-45285' '(at1g15860 : 306.0) INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12760.1). & (gnl|cdd|38287 : 140.0) no description available & (gnl|cdd|86365 : 119.0) no description available & (reliability: 612.0) & (original description: Putative At1g15860, Description = Defective in cullin neddylation protein, PFAM = PF03556)' T '35.2' 'not assigned.unknown' 'niben101scf06976_45354-49369' '(at1g80690 : 289.0) PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT5G25170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35545 : 236.0) no description available & (gnl|cdd|69428 : 171.0) no description available & (reliability: 578.0) & (original description: Putative desi2, Description = DeSI-2, PFAM = PF05903)' T '35.2' 'not assigned.unknown' 'niben101scf06976_105758-112017' '(at1g80700 : 99.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80980.1); Has 476 Blast hits to 340 proteins in 85 species: Archae - 2; Bacteria - 44; Metazoa - 84; Fungi - 36; Plants - 40; Viruses - 0; Other Eukaryotes - 270 (source: NCBI BLink). & (reliability: 198.0) & (original description: Putative BnaA07g20020D, Description = BnaA07g20020D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf06976_153159-156812' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06976_624542-628760' '(at1g15980 : 632.0) encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP.; NDH-dependent cyclic electron flow 1 (NDF1); INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast thylakoid membrane, chloroplast, NAD(P)H dehydrogenase complex (plastoquinone); EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 119 Blast hits to 119 proteins in 57 species: Archae - 0; Bacteria - 90; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|31200 : 107.0) no description available & (reliability: 1264.0) & (original description: Putative PNSB1, Description = Photosynthetic NDH subunit of subcomplex B 1, chloroplastic, PFAM = PF01075)' T '35.2' 'not assigned.unknown' 'niben101scf06986_3215-8679' '(at5g40510 : 308.0) Sucrase/ferredoxin-like family protein; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Sucraseferredoxin-like (InterPro:IPR009737), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Sucrase/ferredoxin-like family protein (TAIR:AT3G27570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70464 : 207.0) no description available & (reliability: 616.0) & (original description: Putative ferredoxin homolog, Description = Clostridium pasteurianum ferredoxin homolog, PFAM = PF06999)' T '35.2' 'not assigned.unknown' 'niben101scf06986_129511-131819' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf06996_213165-223076' '(at4g37190 : 600.0) LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Misato Segment II, myosin-like (InterPro:IPR019605), Tubulin/FtsZ, N-terminal (InterPro:IPR019746); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37741 : 325.0) no description available & (reliability: 1200.0) & (original description: Putative Sb08g019730, Description = Putative uncharacterized protein Sb08g019730, PFAM = PF10644;PF14881)' T '35.2' 'not assigned.unknown' 'niben101scf07000_100643-103377' '(at3g63540 : 229.0) Conceptual translation of this open reading frame gave the sequence of a 229-residue hypothetical protein that contains the same sequence as the mature A. thaliana chloroplast luminal 19-kDa protein linked to a putative signal sequence.; Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: oxygen evolving complex, extrinsic to membrane; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123). & (reliability: 458.0) & (original description: Putative BnaC03g27090D, Description = BnaC03g27090D protein, PFAM = PF01789)' T '35.2' 'not assigned.unknown' 'niben101scf07001_155892-159109' '(at1g58120 : 189.0) BEST Arabidopsis thaliana protein match is: methyltransferases (TAIR:AT5G01710.1); Has 93 Blast hits to 93 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative MTR_4g093860, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07004_186352-188568' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07004_188086-195796' '(at4g33380 : 352.0) unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: pollen tube. & (reliability: 704.0) & (original description: Putative BnaC01g04830D, Description = BnaC01g04830D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07007_203668-207281' '(at1g52910 : 213.0) Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT3G15480.1); Has 528 Blast hits to 528 proteins in 99 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 528; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70227 : 119.0) no description available & (reliability: 426.0) & (original description: Putative 1G01, Description = Putative uncharacterized protein 1G01, PFAM = PF06749)' T '35.2' 'not assigned.unknown' 'niben101scf07008_157512-160027' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07008_317867-324010' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07018_423674-427034' ' no hits & (original description: Putative At5g02020, Description = AT5g02020/T7H20_70, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07019_224901-227474' ' (original description: Putative SN2, Description = Snakin-2, PFAM = PF02704)' T '35.2' 'not assigned.unknown' 'niben101scf07023_245039-247500' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07026_83813-86490' ' no hits & (original description: Putative PGSC0003DMG400018175, Description = Putative uncharacterized protein P0583G08.4, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07027_278630-282019' ' (original description: Putative ACP1, Description = Acyl carrier protein 1, chloroplastic, PFAM = PF00550)' T '35.2' 'not assigned.unknown' 'niben101scf07027_407508-410245' ' no hits & (original description: Putative PGSC0003DMG400043569, Description = Putative E3 ubiquitin-protein ligase RING1-like, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf07027_485913-493057' '(at3g48480 : 211.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: UB-like protease 1D (TAIR:AT1G60220.1); Has 84 Blast hits to 84 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 30; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 422.0) & (original description: Putative Sb05g009053, Description = Putative uncharacterized protein Sb05g009053, PFAM = PF02902)' T '35.2' 'not assigned.unknown' 'niben101scf07030_528196-531396' '(at1g31940 : 139.0) unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35585.1); Has 67 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative At1g31940, Description = ATP-dependent RNA helicase Dbp73D isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07031_42721-45211' ' no hits & (original description: Putative PGSC0003DMG400019193, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07034_52569-55279' ' no hits & (original description: Putative h1, Description = Histone H1, PFAM = PF00538)' T '35.2' 'not assigned.unknown' 'niben101scf07034_209451-235799' ' no hits & (original description: Putative , Description = Gag-protease-integrase-RT-RNaseH polyprotein, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf07034_972287-984146' '(at3g51130 : 721.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0183 (InterPro:IPR005373); Has 269 Blast hits to 265 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 82; Plants - 37; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|67302 : 529.0) no description available & (gnl|cdd|38030 : 473.0) no description available & (reliability: 1442.0) & (original description: Putative glysoja_003176, Description = UPF0183 protein, PFAM = PF03676)' T '35.2' 'not assigned.unknown' 'niben101scf07036_255893-258441' ' no hits & (original description: Putative , Description = Putative E3 ubiquitin-protein ligase RHA2B-like, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf07044_93512-95949' ' no hits & (original description: Putative PGSC0003DMG400030540, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07054_479006-482661' ' no hits & (original description: Putative Sb09g004280, Description = Putative uncharacterized protein Sb09g004280, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07060_57134-61290' '(at3g15095 : 148.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative hcf243, Description = Chloroplast protein HCF243, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07060_352242-356605' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07061_155773-163125' '(at5g48830 : 385.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 770.0) & (original description: Putative BnaC07g26780D, Description = BnaC07g26780D protein, PFAM = PF12452;PF12452)' T '35.2' 'not assigned.unknown' 'niben101scf07061_164528-166812' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07063_48773-53158' '(at1g64355 : 180.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3593 (InterPro:IPR021995); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 360.0) & (original description: Putative asl4507, Description = Asl4507 protein, PFAM = PF12159)' T '35.2' 'not assigned.unknown' 'niben101scf07066_654828-657751' '(at5g67210 : 409.0) Protein of unknown function (DUF579); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF579 (InterPro:IPR021148), Conserved hypothetical protein CHP01627 (InterPro:IPR006514); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF579) (TAIR:AT3G50220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68247 : 313.0) no description available & (reliability: 818.0) & (original description: Putative GXM1, Description = Putative polysaccharide biosynthesis protein, PFAM = PF04669)' T '35.2' 'not assigned.unknown' 'niben101scf07070_214449-220779' '(at3g28150 : 372.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 22 (TBL22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 19 (TAIR:AT5G15900.1); Has 1337 Blast hits to 1308 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1337; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 109.0) no description available & (reliability: 744.0) & (original description: Putative AXY4L, Description = Protein ALTERED XYLOGLUCAN 4-like, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf07080_375892-378098' '(at3g48660 : 90.9) Protein of unknown function (DUF 3339); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3339 (InterPro:IPR021775); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF 3339) (TAIR:AT5G63500.1); Has 274 Blast hits to 269 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 274; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative Sb09g000370, Description = Putative uncharacterized protein Sb09g000370, PFAM = PF11820)' T '35.2' 'not assigned.unknown' 'niben101scf07086_135345-140767' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07087_115165-122741' '(at1g53250 : 155.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53800.1); Has 11909 Blast hits to 7704 proteins in 757 species: Archae - 51; Bacteria - 1338; Metazoa - 4550; Fungi - 987; Plants - 464; Viruses - 24; Other Eukaryotes - 4495 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative PGSC0003DMG400015334, Description = BnaA06g01030D protein, PFAM = PF07460)' T '35.2' 'not assigned.unknown' 'niben101scf07089_18709-24866' ' no hits & (original description: Putative glysoja_028901, Description = Glycine-rich RNA-binding protein 2, mitochondrial, PFAM = PF00076)' T '35.2' 'not assigned.unknown' 'niben101scf07103_56163-65695' '(at2g43465 : 368.0) RNA-binding ASCH domain protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: ProFAR isomerase-like (InterPro:IPR010759), ASCH domain (InterPro:IPR007374); BEST Arabidopsis thaliana protein match is: RNA-binding ASCH domain protein (TAIR:AT3G03320.1); Has 127 Blast hits to 127 proteins in 42 species: Archae - 39; Bacteria - 18; Metazoa - 2; Fungi - 4; Plants - 39; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (gnl|cdd|33802 : 97.3) no description available & (reliability: 736.0) & (original description: Putative F383_34639, Description = Lysine-specific demethylase 5C, PFAM = PF04266)' T '35.2' 'not assigned.unknown' 'niben101scf07103_273920-277014' ' no hits & (original description: Putative ICK5, Description = Cyclin-dependent kinase inhibitor 7, PFAM = PF02234)' T '35.2' 'not assigned.unknown' 'niben101scf07105_39260-40430' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07105_418056-420460' ' (original description: Putative ERF098, Description = Ethylene-responsive transcription factor ERF098, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'niben101scf07115_153018-157505' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07121_157094-159528' ' (original description: Putative STIG1, Description = Protein STIG1, PFAM = PF04885)' T '35.2' 'not assigned.unknown' 'niben101scf07121_160824-165441' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07123_33087-35560' ' no hits & (original description: Putative PGSC0003DMG400004654, Description = Ribosomal family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07137_77721-79942' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07141_95505-98758' '(at2g24530 : 260.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 520.0) & (original description: Putative PGSC0003DMG400014161, Description = Transcriptional coactivator Hfi1/Transcriptional adapter 1, PFAM = PF12767)' T '35.2' 'not assigned.unknown' 'niben101scf07147_129290-143487' '(at5g55660 : 160.0) DEK domain-containing chromatin associated protein; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: DEK domain-containing chromatin associated protein (TAIR:AT4G26630.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37477 : 95.2) no description available & (reliability: 320.0) & (original description: Putative BnaC01g18800D, Description = BnaC01g18800D protein, PFAM = PF08766)' T '35.2' 'not assigned.unknown' 'niben101scf07147_308812-312770' '(at5g55640 : 104.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative PGSC0003DMG400022173, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07147_359752-362087' ' no hits & (original description: Putative PGSC0003DMG400022174, Description = UPA24, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07152_70002-72646' '(at2g39170 : 134.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function NEP (InterPro:IPR019320); Has 57 Blast hits to 57 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|39723 : 119.0) no description available & (reliability: 268.0) & (original description: Putative Os08g0152500, Description = Os08g0152500 protein, PFAM = PF10167)' T '35.2' 'not assigned.unknown' 'niben101scf07152_222316-227243' '(at5g04320 : 93.2) Shugoshin C terminus; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: meiotic chromosome segregation; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Shugoshin, C-terminal (InterPro:IPR011515); BEST Arabidopsis thaliana protein match is: Shugoshin C terminus (TAIR:AT3G10440.1); Has 2871 Blast hits to 2420 proteins in 372 species: Archae - 12; Bacteria - 318; Metazoa - 1409; Fungi - 181; Plants - 120; Viruses - 4; Other Eukaryotes - 827 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative SGO1, Description = At5g04320, PFAM = PF07557)' T '35.2' 'not assigned.unknown' 'niben101scf07152_404035-407211' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07155_110969-127584' '(at5g64460 : 439.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G58280.1). & (gnl|cdd|39951 : 308.0) no description available & (reliability: 878.0) & (original description: Putative At5g64460, Description = Phosphoglycerate mutase-like protein 1, PFAM = PF00300)' T '35.2' 'not assigned.unknown' 'niben101scf07155_224095-232777' '(at5g17070 : 100.0) CONTAINS InterPro DOMAIN/s: Protein phosphatase 4 core regulatory subunit R2 (InterPro:IPR015267); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative TIDP3766, Description = BnaC02g07010D protein, PFAM = PF09184)' T '35.2' 'not assigned.unknown' 'niben101scf07156_126307-128819' ' no hits & (original description: Putative GDU2, Description = Protein GLUTAMINE DUMPER 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07161_38271-40678' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07162_46899-64916' '(at1g09980 : 928.0) Putative serine esterase family protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3657 (InterPro:IPR022122), Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: Putative serine esterase family protein (TAIR:AT1G58350.2); Has 481 Blast hits to 386 proteins in 96 species: Archae - 0; Bacteria - 0; Metazoa - 284; Fungi - 2; Plants - 83; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|37416 : 354.0) no description available & (gnl|cdd|68625 : 150.0) no description available & (reliability: 1856.0) & (original description: Putative ZW18, Description = F19C14.4 protein, PFAM = PF12394;PF05057)' T '35.2' 'not assigned.unknown' 'niben101scf07162_110227-115343' '(at5g62580 : 373.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G27210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 746.0) & (original description: Putative At1g27210, Description = Armadillo/beta-catenin-like repeat-containing protein, PFAM = PF02985)' T '35.2' 'not assigned.unknown' 'niben101scf07162_300945-303709' ' no hits & (original description: Putative NAC3, Description = NAC transcription factor, PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'niben101scf07166_77629-80815' ' (original description: Putative , Description = , PFAM = PF03108)' T '35.2' 'not assigned.unknown' 'niben101scf07168_259253-264685' ' no hits & (original description: Putative NAC2, Description = NAC transcription factor, PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'niben101scf07172_45625-48904' ' no hits & (original description: Putative , Description = Disulfide isomerases, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07172_235845-238656' ' no hits & (original description: Putative , Description = Putative membrane-associated kinase regulator 1-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07181_10198-13802' ' no hits & (original description: Putative , Description = Dead Box protein Dhh1p, PFAM = PF12734)' T '35.2' 'not assigned.unknown' 'niben101scf07181_19206-21904' ' (original description: Putative BA1, Description = Retrotransposon protein, putative, Ty1-copia subclass, PFAM = PF13976)' T '35.2' 'not assigned.unknown' 'niben101scf07182_74316-79213' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07182_189178-536901' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07182_382375-385207' ' no hits & (original description: Putative , Description = , PFAM = PF01419)' T '35.2' 'not assigned.unknown' 'niben101scf07182_385208-387523' ' no hits & (original description: Putative , Description = , PFAM = PF01419)' T '35.2' 'not assigned.unknown' 'niben101scf07184_572842-577290' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07188_84165-87239' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07191_4728-8585' ' no hits & (original description: Putative , Description = Ubiquitin-binding WIYLD domain protein, PFAM = PF10440)' T '35.2' 'not assigned.unknown' 'niben101scf07201_246549-249255' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Retrovirus-related Pol polyprotein LINE-1, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf07202_114014-116996' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07205_25643-33186' '(at3g54970 : 336.0) D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|29567 : 102.0) no description available & (reliability: 672.0) & (original description: Putative At3g54970, Description = D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein, PFAM = PF01063)' T '35.2' 'not assigned.unknown' 'niben101scf07207_197428-201661' ' no hits & (original description: Putative PGSC0003DMG400038182, Description = Mads box protein, putative, PFAM = PF00319)' T '35.2' 'not assigned.unknown' 'niben101scf07214_6126-11251' '(at2g41760 : 258.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function WDYHV (InterPro:IPR019161); Has 201 Blast hits to 201 proteins in 90 species: Archae - 0; Bacteria - 2; Metazoa - 132; Fungi - 10; Plants - 30; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|38471 : 216.0) no description available & (reliability: 516.0) & (original description: Putative At2g41760, Description = Protein N-terminal glutamine amidohydrolase, PFAM = PF09764)' T '35.2' 'not assigned.unknown' 'niben101scf07214_25957-34270' '(at2g41770 : 1144.0) Protein of unknown function (DUF288); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF288 (InterPro:IPR005049); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF288) (TAIR:AT3G57420.1); Has 196 Blast hits to 196 proteins in 30 species: Archae - 2; Bacteria - 9; Metazoa - 51; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 2288.0) & (original description: Putative At2g41770, Description = Expressed protein, PFAM = PF03385)' T '35.2' 'not assigned.unknown' 'niben101scf07214_37029-50246' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07223_412290-415591' '(at3g09570 : 608.0) Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT5G18520.1); Has 534 Blast hits to 530 proteins in 110 species: Archae - 0; Bacteria - 2; Metazoa - 259; Fungi - 16; Plants - 218; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|37780 : 565.0) no description available & (gnl|cdd|87161 : 150.0) no description available & (reliability: 1216.0) & (original description: Putative tmr1, Description = Putative transmembrane receptor, PFAM = PF06814)' T '35.2' 'not assigned.unknown' 'niben101scf07223_427333-435775' '(at3g09560 : 684.0) Lipin family protein; FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: cellular response to phosphate starvation, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: LNS2, Lipin/Ned1/Smp2 (InterPro:IPR013209), Lipin, N-terminal conserved region (InterPro:IPR007651); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphohydrolase 2 (TAIR:AT5G42870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37327 : 532.0) no description available & (gnl|cdd|34687 : 232.0) no description available & (reliability: 1368.0) & (original description: Putative PAH1, Description = Phosphatidate phosphatase PAH1, PFAM = PF16876;PF08235;PF04571)' T '35.2' 'not assigned.unknown' 'niben101scf07226_517955-526216' '(at3g45890 : 472.0) Encodes RUS1 (root UVB sensitive 1), a protein that contains DUF647 (domain of unknown function 647), a domain highly conserved in eukaryotes. The primary root of rus1 is hypersensitive to very low-fluence-rate (VLF) UVB.; ROOT UVB SENSITIVE 1 (RUS1); INVOLVED IN: response to UV-B, developmental process; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: lateral root, root apical meristem, callus, elongation zone, embryonic root; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT1G13770.1); Has 458 Blast hits to 456 proteins in 133 species: Archae - 0; Bacteria - 2; Metazoa - 116; Fungi - 71; Plants - 198; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|68458 : 375.0) no description available & (gnl|cdd|39450 : 352.0) no description available & (reliability: 944.0) & (original description: Putative RUS1, Description = Protein WEAK AUXIN RESPONSE 3, PFAM = PF04884)' T '35.2' 'not assigned.unknown' 'niben101scf07226_543925-550072' '(at4g19160 : 441.0) unknown protein; Has 315 Blast hits to 315 proteins in 152 species: Archae - 0; Bacteria - 250; Metazoa - 2; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 882.0) & (original description: Putative , Description = , PFAM = PF13369)' T '35.2' 'not assigned.unknown' 'niben101scf07244_49681-52830' ' no hits & (original description: Putative PGSC0003DMG400021282, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07245_15140-19342' ' no hits & (original description: Putative PGSC0003DMG400011643, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07247_401110-417241' '(at1g53040 : 561.0) Protein of unknown function (DUF616); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF616 (InterPro:IPR006852); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF616) (TAIR:AT1G28240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68342 : 460.0) no description available & (reliability: 1122.0) & (original description: Putative Os01g0304300, Description = Os01g0304300 protein, PFAM = PF04765)' T '35.2' 'not assigned.unknown' 'niben101scf07247_439243-445151' '(at4g27500 : 369.0) interacts with H+-ATPase, and regulates its activity; proton pump interactor 1 (PPI1); FUNCTIONS IN: protein binding; INVOLVED IN: regulation of proton transport; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36690.1); Has 56187 Blast hits to 35171 proteins in 2461 species: Archae - 533; Bacteria - 11472; Metazoa - 20772; Fungi - 6196; Plants - 2564; Viruses - 257; Other Eukaryotes - 14393 (source: NCBI BLink). & (reliability: 738.0) & (original description: Putative bip131, Description = BRI1-KD interacting protein 131, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07261_14416-22944' '(at1g53400 : 192.0) Ubiquitin domain-containing protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Ubiquitin domain-containing protein (TAIR:AT5G45740.1); Has 319 Blast hits to 318 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 63; Plants - 89; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|35237 : 130.0) no description available & (reliability: 384.0) & (original description: Putative ubtd2, Description = Ubiquitin domain-containing protein 2, PFAM = PF16455)' T '35.2' 'not assigned.unknown' 'niben101scf07272_61348-72745' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07275_13926-17134' ' no hits & (original description: Putative , Description = , PFAM = PF03226)' T '35.2' 'not assigned.unknown' 'niben101scf07278_21318-23880' '(at4g33985 : 114.0) Protein of unknown function (DUF1685); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1685) (TAIR:AT2G15590.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71376 : 85.8) no description available & (reliability: 228.0) & (original description: Putative , Description = , PFAM = PF07939)' T '35.2' 'not assigned.unknown' 'niben101scf07288_581330-585902' '(at4g19390 : 224.0) Uncharacterised protein family (UPF0114); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0114, plant (InterPro:IPR016804), Uncharacterised protein family UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0114) (TAIR:AT5G13720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|86300 : 103.0) no description available & (reliability: 448.0) & (original description: Putative AY107414, Description = Uncharacterized protein family UPF0114, PFAM = PF03350)' T '35.2' 'not assigned.unknown' 'niben101scf07288_592851-596065' '(at4g19370 : 112.0) Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT1G31720.1); Has 77 Blast hits to 77 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative PGSC0003DMG400001952, Description = Putative ovule protein, PFAM = PF06749)' T '35.2' 'not assigned.unknown' 'niben101scf07288_595826-607495' '(at5g45330 : 174.0) decapping 5-like (DCP5-L); LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: DFDF motif (InterPro:IPR019050), FFD/TFG box motif (InterPro:IPR019053); BEST Arabidopsis thaliana protein match is: decapping 5 (TAIR:AT1G26110.2); Has 2301 Blast hits to 1293 proteins in 233 species: Archae - 0; Bacteria - 31; Metazoa - 606; Fungi - 462; Plants - 179; Viruses - 16; Other Eukaryotes - 1007 (source: NCBI BLink). & (gnl|cdd|29723 : 128.0) no description available & (gnl|cdd|36290 : 122.0) no description available & (reliability: 348.0) & (original description: Putative sum2, Description = G2/M transition checkpoint protein Sum2, PFAM = PF09532;PF12701)' T '35.2' 'not assigned.unknown' 'niben101scf07296_25323-27792' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07296_29954-59830' '(at4g33380 : 314.0) unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: pollen tube. & (reliability: 628.0) & (original description: Putative BnaC01g04830D, Description = BnaC01g04830D protein, PFAM = PF14295)' T '35.2' 'not assigned.unknown' 'niben101scf07296_119887-122912' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07303_6540-10823' ' no hits & (original description: Putative PGSC0003DMG400019282, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07303_38079-41344' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07304_79063-81535' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07305_71339-74067' '(at2g12462 : 137.0) BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G15760.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative , Description = , PFAM = PF07647)' T '35.2' 'not assigned.unknown' 'niben101scf07311_152057-163940' ' no hits & (original description: Putative , Description = Zinc finger containing preotein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07314_20418-25509' ' no hits & (original description: Putative NFD6, Description = At1g28395, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07314_243424-246890' '(at5g46060 : 181.0) Protein of unknown function, DUF599; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF599 (InterPro:IPR006747); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF599 (TAIR:AT5G24600.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68233 : 169.0) no description available & (reliability: 362.0) & (original description: Putative Sb07g019180, Description = Putative uncharacterized protein Sb07g019180, PFAM = PF04654)' T '35.2' 'not assigned.unknown' 'niben101scf07326_64511-69803' '(at2g02955 : 471.0) maternal effect embryo arrest 12 (MEE12); CONTAINS InterPro DOMAIN/s: Transcription initiation factor Rrn7 (InterPro:IPR021752); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01335.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 942.0) & (original description: Putative MEE12, Description = TATA box-binding protein-associated factor RNA polymerase I subunit B, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07327_32782-35406' ' no hits & (original description: Putative At2g29180, Description = Putative uncharacterized protein At2g29180, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07339_92159-98092' '(at5g66050 : 263.0) Wound-responsive family protein; FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: nucleotide-excision repair; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF151 (InterPro:IPR003729), UvrB/UvrC protein (InterPro:IPR001943); BEST Arabidopsis thaliana protein match is: Wound-responsive family protein (TAIR:AT1G19660.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative BnaC09g08310D, Description = BnaC09g08310D protein, PFAM = PF02577)' T '35.2' 'not assigned.unknown' 'niben101scf07339_299787-305897' '(at4g35760 : 328.0) Encodes a bimodular enzyme comprising an integral domain homologous to the catalytic subunit of mammalian vitamin K epoxide reductase (VKORC1, EC 1.1.4.1) that is fused to a soluble thioredoxin-like moiety. Using yeast microsomes as a recombinant system, it was shown that the VKORC1 domain of At4g35760 functions as a stringent naphthoquinone reductase, and that its reduced Trx-like partner can serve as its electron donor. Located in plastid.; NAD(P)H dehydrogenase (quinone)s; FUNCTIONS IN: NAD(P)H dehydrogenase (quinone) activity; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vitamin K epoxide reductase (InterPro:IPR012932), Thioredoxin-like fold (InterPro:IPR012336); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87393 : 100.0) no description available & (reliability: 656.0) & (original description: Putative VKOR, Description = Vitamin K epoxide reductase, PFAM = PF07884)' T '35.2' 'not assigned.unknown' 'niben101scf07343_171381-178706' '(at4g37680 : 581.0) heptahelical transmembrane protein HHP4; heptahelical protein 4 (HHP4); FUNCTIONS IN: receptor activity; INVOLVED IN: response to hormone stimulus, response to sucrose stimulus; LOCATED IN: integral to membrane; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Hly-III related (InterPro:IPR004254); BEST Arabidopsis thaliana protein match is: heptahelical protein 5 (TAIR:AT4G38320.1). & (gnl|cdd|35967 : 228.0) no description available & (gnl|cdd|86213 : 132.0) no description available & (reliability: 1162.0) & (original description: Putative Os03g0200000, Description = Haemolysin-III related family protein, expressed, PFAM = PF03006)' T '35.2' 'not assigned.unknown' 'niben101scf07346_82312-84593' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07350_38222-52035' '(at5g21160 : 493.0) LA RNA-binding protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Protein of unknown function DM15 (InterPro:IPR006607); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT4G35890.1). & (gnl|cdd|47984 : 99.5) no description available & (reliability: 986.0) & (original description: Putative LARP1A, Description = La-related protein 1A, PFAM = PF05383)' T '35.2' 'not assigned.unknown' 'niben101scf07352_84308-87002' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07352_402441-404971' '(at2g42610 : 235.0) LIGHT SENSITIVE HYPOCOTYLS 10 (LSH10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT1G07090.1); Has 309 Blast hits to 309 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68427 : 233.0) no description available & (reliability: 470.0) & (original description: Putative LSH10, Description = Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10, PFAM = PF04852)' T '35.2' 'not assigned.unknown' 'niben101scf07353_209988-228125' '(at5g32470 : 723.0) Haem oxygenase-like, multi-helical; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem oxygenase-like, multi-helical (InterPro:IPR016084), TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C (InterPro:IPR004305); Has 1988 Blast hits to 1985 proteins in 797 species: Archae - 79; Bacteria - 1526; Metazoa - 2; Fungi - 151; Plants - 51; Viruses - 0; Other Eukaryotes - 179 (source: NCBI BLink). & (gnl|cdd|31161 : 135.0) no description available & (reliability: 1446.0) & (original description: Putative TNEA_C, Description = Probable aminopyrimidine aminohydrolase, mitochondrial, PFAM = PF03070)' T '35.2' 'not assigned.unknown' 'niben101scf07355_163930-169721' '(at4g10080 : 124.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13530.1); Has 120 Blast hits to 114 proteins in 21 species: Archae - 2; Bacteria - 4; Metazoa - 0; Fungi - 12; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative PGSC0003DMG400008421, Description = BnaA05g13060D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07366_200495-209494' '(at5g52980 : 197.0) CONTAINS InterPro DOMAIN/s: ATPase, vacuolar ER assembly factor, Vma12 (InterPro:IPR021013); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative BnaC02g14800D, Description = BnaC02g14800D protein, PFAM = PF11712)' T '35.2' 'not assigned.unknown' 'niben101scf07370_127485-129958' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf07370_332354-338552' '(at3g56750 : 548.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41150.2); Has 128 Blast hits to 128 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 1096.0) & (original description: Putative Sb02g040780, Description = Putative uncharacterized protein Sb02g040780, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07382_38167-41329' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07382_219389-222308' ' no hits & (original description: Putative PGSC0003DMG400028538, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07383_351995-354635' '(at1g64980 : 417.0) Nucleotide-diphospho-sugar transferases superfamily protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 703 Blast hits to 703 proteins in 58 species: Archae - 0; Bacteria - 90; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 4; Other Eukaryotes - 564 (source: NCBI BLink). & (reliability: 834.0) & (original description: Putative CDI, Description = Glycosyltransferase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07383_771998-774963' '(at2g31560 : 171.0) Protein of unknown function (DUF1685); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1685) (TAIR:AT1G05870.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|71376 : 98.9) no description available & (reliability: 342.0) & (original description: Putative Sb05g010050, Description = Putative uncharacterized protein Sb05g010050, PFAM = PF07939)' T '35.2' 'not assigned.unknown' 'niben101scf07383_1248951-1254940' '(at1g09340 : 652.0) Encodes CHLOROPLAST RNA BINDING (CRB), a putative RNA-binding protein. CRB is important for the proper functioning of the chloroplast. Mutations in CRB also affects the circadian system, altering the expression of both oscillator and output genes.; chloroplast RNA binding (CRB); FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: in 6 processes; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: chloroplast stem-loop binding protein of 41 kDa (TAIR:AT3G63140.1); Has 5936 Blast hits to 5936 proteins in 1402 species: Archae - 366; Bacteria - 3891; Metazoa - 108; Fungi - 58; Plants - 234; Viruses - 3; Other Eukaryotes - 1276 (source: NCBI BLink). & (gnl|cdd|30800 : 113.0) no description available & (reliability: 1304.0) & (original description: Putative strE, Description = dTDP-glucose 4,6-dehydratase, PFAM = PF01370)' T '35.2' 'not assigned.unknown' 'niben101scf07391_152796-166591' '(at4g11720 : 936.0) Encodes HAP2 with the following predicted motifs: an N-terminal secretion signal, a single transmembrane domain and a C-terminal histidine-rich domain. HAP2 is expressed only in the haploid sperm and is required for pollen tube guidance and fertilization. Predominantly localized to sperm endoplasmic reticulum membranes. May also reside in other endomembranes, including the plasma membrane.; HAPLESS 2 (HAP2); CONTAINS InterPro DOMAIN/s: Generative cell specific-1, HAP2-GCS1 (InterPro:IPR018928); Has 2122 Blast hits to 1565 proteins in 270 species: Archae - 6; Bacteria - 421; Metazoa - 806; Fungi - 82; Plants - 227; Viruses - 5; Other Eukaryotes - 575 (source: NCBI BLink). & (reliability: 1872.0) & (original description: Putative HAP2, Description = Protein HAPLESS 2, PFAM = PF10699)' T '35.2' 'not assigned.unknown' 'niben101scf07391_346082-349305' ' no hits & (original description: Putative , Description = Precursor of thiamin-binding protein, PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'niben101scf07393_53368-59976' '(at2g36630 : 499.0) Sulfite exporter TauE/SafE family protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF81 (InterPro:IPR002781); BEST Arabidopsis thaliana protein match is: Sulfite exporter TauE/SafE family protein (TAIR:AT2G25737.1); Has 1587 Blast hits to 1517 proteins in 484 species: Archae - 83; Bacteria - 808; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 496 (source: NCBI BLink). & (reliability: 998.0) & (original description: Putative BnaC04g08690D, Description = BnaC04g08690D protein, PFAM = PF01925;PF01925)' T '35.2' 'not assigned.unknown' 'niben101scf07398_4220-8247' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07399_86300-94953' '(at2g38025 : 268.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT3G57810.1); Has 173 Blast hits to 173 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 2; Plants - 136; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative MTR_4g014750, Description = OTU-like cysteine protease, PFAM = PF02338)' T '35.2' 'not assigned.unknown' 'niben101scf07399_144260-152278' '(gnl|cdd|68624 : 128.0) no description available & (at5g01150 : 115.0) Protein of unknown function (DUF674); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF674 (InterPro:IPR007750); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF674) (TAIR:AT5G01130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative PGSC0003DMG400020360, Description = , PFAM = PF05056)' T '35.2' 'not assigned.unknown' 'niben101scf07402_218197-224375' '(at5g37478 : 125.0) TPX2 (targeting protein for Xklp2) protein family; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT3G01015.1); Has 159 Blast hits to 159 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 0; Plants - 142; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative MAP20, Description = Microtubule-associated protein, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'niben101scf07402_661402-665009' ' no hits & (original description: Putative HMGA, Description = HMG-Y-related protein A, PFAM = PF02178;PF02178;PF00538)' T '35.2' 'not assigned.unknown' 'niben101scf07404_465955-468257' ' no hits & (original description: Putative PGSC0003DMG400016351, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07405_504311-512725' '(at1g78995 : 132.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative Os06g0704200, Description = Os06g0704200 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07413_554597-561557' '(at2g39950 : 348.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 941 Blast hits to 229 proteins in 79 species: Archae - 0; Bacteria - 8; Metazoa - 89; Fungi - 54; Plants - 41; Viruses - 0; Other Eukaryotes - 749 (source: NCBI BLink). & (reliability: 696.0) & (original description: Putative F383_12855, Description = Translation initiation factor 2 subunit gamma, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07416_14815-27101' '(at5g07960 : 150.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0139 (InterPro:IPR005351); Has 193 Blast hits to 193 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|38672 : 109.0) no description available & (gnl|cdd|67295 : 105.0) no description available & (reliability: 300.0) & (original description: Putative At5g07960, Description = Protein Asterix, PFAM = PF03669)' T '35.2' 'not assigned.unknown' 'niben101scf07424_202565-222409' '(at4g39380 : 166.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: TSL-kinase interacting protein 1 (TAIR:AT2G36960.2). & (reliability: 332.0) & (original description: Putative TKI1, Description = TSL-kinase interacting protein 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07424_340789-376138' '(at2g22140 : 402.0) Forms a complex with MUS81 that functions as endonuclease in DNA recombination and repair processes.; essential meiotic endonuclease 1B (EME1B); CONTAINS InterPro DOMAIN/s: ERCC4 domain (InterPro:IPR006166); BEST Arabidopsis thaliana protein match is: essential meiotic endonuclease 1A (TAIR:AT2G21800.1); Has 542 Blast hits to 486 proteins in 142 species: Archae - 0; Bacteria - 42; Metazoa - 170; Fungi - 104; Plants - 48; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|87979 : 162.0) no description available & (reliability: 804.0) & (original description: Putative EME1, Description = Crossover junction endonuclease EME1, PFAM = PF02732)' T '35.2' 'not assigned.unknown' 'niben101scf07424_340804-391457' '(at2g22140 : 394.0) Forms a complex with MUS81 that functions as endonuclease in DNA recombination and repair processes.; essential meiotic endonuclease 1B (EME1B); CONTAINS InterPro DOMAIN/s: ERCC4 domain (InterPro:IPR006166); BEST Arabidopsis thaliana protein match is: essential meiotic endonuclease 1A (TAIR:AT2G21800.1); Has 542 Blast hits to 486 proteins in 142 species: Archae - 0; Bacteria - 42; Metazoa - 170; Fungi - 104; Plants - 48; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (gnl|cdd|87979 : 166.0) no description available & (reliability: 788.0) & (original description: Putative EME1B, Description = Crossover junction endonuclease EME1B, PFAM = PF02732)' T '35.2' 'not assigned.unknown' 'niben101scf07428_72642-75546' '(at3g07350 : 239.0) Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT3G25240.1); Has 393 Blast hits to 390 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 391; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68298 : 205.0) no description available & (reliability: 478.0) & (original description: Putative TCM_002725, Description = Sulfate/thiosulfate import ATP-binding protein cysA, putative, PFAM = PF04720)' T '35.2' 'not assigned.unknown' 'niben101scf07428_211791-220945' '(at4g13030 : 248.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 496.0) & (original description: Putative At4g13030, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07428_261157-267831' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07429_231922-234938' ' no hits & (original description: Putative , Description = Melanoma inhibitory activity protein 3, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07433_33330-39930' '(at4g17760 : 490.0) damaged DNA binding;exodeoxyribonuclease IIIs; FUNCTIONS IN: damaged DNA binding, exodeoxyribonuclease III activity; INVOLVED IN: DNA repair; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Repair protein Rad1/Rec1 (InterPro:IPR003021); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|48351 : 125.0) no description available & (reliability: 980.0) & (original description: Putative Sb10g002080, Description = Putative uncharacterized protein Sb10g002080, PFAM = PF02144)' T '35.2' 'not assigned.unknown' 'niben101scf07436_113555-116563' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07436_116564-119800' '(at1g06440 : 487.0) Ubiquitin carboxyl-terminal hydrolase family protein; LOCATED IN: mitochondrion; EXPRESSED IN: shoot apex, root; CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant (InterPro:IPR021099); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein (TAIR:AT4G33495.1); Has 412 Blast hits to 405 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 411; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 974.0) & (original description: Putative At1g06440, Description = At1g06440, PFAM = PF11955)' T '35.2' 'not assigned.unknown' 'niben101scf07440_112550-115826' ' no hits & (original description: Putative glysoja_023868, Description = DNA-directed RNA polymerases I, II, and III subunit RPABC4, PFAM = PF05623)' T '35.2' 'not assigned.unknown' 'niben101scf07440_211196-214362' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07459_157196-163710' '(at2g45520 : 85.5) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 260 Blast hits to 238 proteins in 75 species: Archae - 0; Bacteria - 6; Metazoa - 94; Fungi - 40; Plants - 38; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative PGSC0003DMG400021635, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07465_182785-186120' '(at5g39600 : 188.0) CONTAINS InterPro DOMAIN/s: Ribosomal protein L53, mitochondrial (InterPro:IPR019716); Has 50 Blast hits to 50 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 376.0) & (original description: Putative mRPL53, Description = Mitochondrial 39S ribosomal protein L53, PFAM = PF10780)' T '35.2' 'not assigned.unknown' 'niben101scf07465_185414-192831' '(at5g39590 : 596.0) TLD-domain containing nucleolar protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TLDc (InterPro:IPR006571); Has 191 Blast hits to 191 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 11; Plants - 49; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (gnl|cdd|39836 : 347.0) no description available & (gnl|cdd|47882 : 118.0) no description available & (reliability: 1192.0) & (original description: Putative , Description = LRR receptor-like serine/threonine-protein kinase FLS2, PFAM = PF07534)' T '35.2' 'not assigned.unknown' 'niben101scf07465_186121-192244' '(at5g39590 : 598.0) TLD-domain containing nucleolar protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TLDc (InterPro:IPR006571); Has 191 Blast hits to 191 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 11; Plants - 49; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (gnl|cdd|39836 : 346.0) no description available & (gnl|cdd|47882 : 118.0) no description available & (reliability: 1196.0) & (original description: Putative , Description = LRR receptor-like serine/threonine-protein kinase FLS2, PFAM = PF07534)' T '35.2' 'not assigned.unknown' 'niben101scf07466_317957-329216' '(at5g63220 : 407.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0363 (InterPro:IPR007317); Has 304 Blast hits to 301 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 121; Plants - 35; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|38234 : 176.0) no description available & (gnl|cdd|67790 : 92.0) no description available & (reliability: 814.0) & (original description: Putative At5g63220, Description = At5g63220, PFAM = PF04190)' T '35.2' 'not assigned.unknown' 'niben101scf07470_69600-122276' '(at2g39650 : 241.0) Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT2G38820.2); Has 395 Blast hits to 393 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 393; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68298 : 177.0) no description available & (reliability: 482.0) & (original description: Putative , Description = , PFAM = PF04720)' T '35.2' 'not assigned.unknown' 'niben101scf07482_95579-98583' '(at4g19950 : 272.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44860.1); Has 338 Blast hits to 330 proteins in 72 species: Archae - 2; Bacteria - 94; Metazoa - 7; Fungi - 0; Plants - 232; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 544.0) & (original description: Putative PGSC0003DMG400001822, Description = At4g19950, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07488_204193-205826' ' no hits & (original description: Putative , Description = Myb/SANT-like DNA-binding domain protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07491_15748-23630' '(at4g35240 : 513.0) Protein of unknown function (DUF630 and DUF632); EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT2G17110.1). & (gnl|cdd|68357 : 292.0) no description available & (reliability: 1026.0) & (original description: Putative PGSC0003DMG400016824, Description = BZIP transcription factor bZIP107, PFAM = PF04783;PF04782)' T '35.2' 'not assigned.unknown' 'niben101scf07491_48719-52773' '(at2g16990 : 105.0) Major facilitator superfamily protein; FUNCTIONS IN: tetracycline transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G16980.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative PGSC0003DMG400010869, Description = Putative hippocampus abundant transcript-like protein 1-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07497_9978-13762' ' (original description: Putative ppo, Description = Polyphenol oxidase, PFAM = PF12142;PF12143;PF00264)' T '35.2' 'not assigned.unknown' 'niben101scf07497_413108-421883' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07498_165562-177813' ' no hits & (original description: Putative PGSC0003DMG400004658, Description = Putative DNA ligase 1-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07499_16401-19265' '(at2g44600 : 102.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G60200.1); Has 56 Blast hits to 55 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07508_127522-130310' ' (original description: Putative flc5, Description = Flowering protein, PFAM = PF00319)' T '35.2' 'not assigned.unknown' 'niben101scf07508_366411-379279' '(at1g18730 : 199.0) likely a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located on the thylakoid membrane. Mutant has impaired NAD(P)H dehydrogenase activity.; NDH dependent flow 6 (NDF6); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative PNSB4, Description = Photosynthetic NDH subunit of subcomplex B 4, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07508_659874-662726' '(at3g29010 : 164.0) Biotin/lipoate A/B protein ligase family; FUNCTIONS IN: catalytic activity; INVOLVED IN: protein modification process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Biotin/lipoate A/B protein ligase (InterPro:IPR004143); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative LPLA, Description = Putative lipoate-protein ligase A, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07509_160839-166479' '(at1g17030 : 654.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G47010.2); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 1308.0) & (original description: Putative BnaC05g13140D, Description = BnaC05g13140D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07509_166609-173829' '(at1g53400 : 165.0) Ubiquitin domain-containing protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Ubiquitin domain-containing protein (TAIR:AT5G45740.1); Has 319 Blast hits to 318 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 63; Plants - 89; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|35237 : 117.0) no description available & (reliability: 330.0) & (original description: Putative ubtd2, Description = Ubiquitin domain-containing protein 2, PFAM = PF16455)' T '35.2' 'not assigned.unknown' 'niben101scf07510_134467-138088' '(at4g27350 : 367.0) Protein of unknown function (DUF1223); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1223 (InterPro:IPR010634); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1223) (TAIR:AT5G54240.1); Has 527 Blast hits to 527 proteins in 230 species: Archae - 0; Bacteria - 439; Metazoa - 0; Fungi - 4; Plants - 46; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|87149 : 204.0) no description available & (reliability: 734.0) & (original description: Putative Os07g0559400, Description = Membrane lipoprotein lipid attachment site-containing protein-like, PFAM = PF06764)' T '35.2' 'not assigned.unknown' 'niben101scf07511_236965-242856' '(at5g62575 : 108.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G47833.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative SDH7B, Description = Succinate dehydrogenase subunit 7B, mitochondrial, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07515_315815-318371' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07516_97167-101392' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben101scf07517_147476-156738' '(at3g52220 : 184.0) CONTAINS InterPro DOMAIN/s: Kinase phosphorylation domain (InterPro:IPR019315); Has 8882 Blast hits to 4920 proteins in 346 species: Archae - 10; Bacteria - 184; Metazoa - 3955; Fungi - 1221; Plants - 712; Viruses - 24; Other Eukaryotes - 2776 (source: NCBI BLink). & (gnl|cdd|39720 : 118.0) no description available & (reliability: 368.0) & (original description: Putative Sb07g024130, Description = Putative uncharacterized protein Sb07g024130, PFAM = PF10159)' T '35.2' 'not assigned.unknown' 'niben101scf07527_82516-87993' '(at1g47980 : 340.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62730.1); Has 169 Blast hits to 169 proteins in 41 species: Archae - 0; Bacteria - 68; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 680.0) & (original description: Putative At1g47980, Description = Desiccation-related protein PCC13-62, PFAM = PF13668)' T '35.2' 'not assigned.unknown' 'niben101scf07527_211041-217045' '(at1g11120 : 84.7) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28170.1); Has 94 Blast hits to 94 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative PGSC0003DMG400021675, Description = BnaA01g35980D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07527_341722-344504' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07539_81307-84626' '(at3g09570 : 410.0) Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT5G18520.1); Has 534 Blast hits to 530 proteins in 110 species: Archae - 0; Bacteria - 2; Metazoa - 259; Fungi - 16; Plants - 218; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (gnl|cdd|37780 : 393.0) no description available & (gnl|cdd|87161 : 136.0) no description available & (reliability: 820.0) & (original description: Putative tmr1, Description = Lung seven transmembrane receptor family protein, PFAM = PF06814)' T '35.2' 'not assigned.unknown' 'niben101scf07541_63650-64899' ' no hits & (original description: Putative psbF, Description = Cytochrome b559 subunit beta, PFAM = PF00283)' T '35.2' 'not assigned.unknown' 'niben101scf07549_256747-260603' '(at5g42920 : 311.0) Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.; THO5; CONTAINS InterPro DOMAIN/s: THO complex, subunit 5 (InterPro:IPR019163); BEST Arabidopsis thaliana protein match is: THO complex, subunit 5 (TAIR:AT1G45233.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37427 : 217.0) no description available & (reliability: 622.0) & (original description: Putative T2P3, Description = THO complex subunit 5, PFAM = PF09766)' T '35.2' 'not assigned.unknown' 'niben101scf07552_77610-84059' ' no hits & (original description: Putative DIR2, Description = Defective in induced resistance 2 protein, PFAM = PF14368)' T '35.2' 'not assigned.unknown' 'niben101scf07554_306620-339374' '(at1g55325 : 1940.0) Encodes the Arabidopsis homolog of the transcriptional regulator MED13, is dynamically expressed during embryogenesis and regulates both developmental timing and the radial pattern formation.; GRAND CENTRAL (GCT); FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of development, heterochronic, regulation of radial pattern formation; LOCATED IN: mediator complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med13 (InterPro:IPR009401). & (gnl|cdd|69831 : 91.0) no description available & (gnl|cdd|38806 : 84.0) no description available & (reliability: 3880.0) & (original description: Putative MED13, Description = Mediator of RNA polymerase II transcription subunit 13, PFAM = PF06333)' T '35.2' 'not assigned.unknown' 'niben101scf07563_298286-301488' '(at5g67210 : 303.0) Protein of unknown function (DUF579); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF579 (InterPro:IPR021148), Conserved hypothetical protein CHP01627 (InterPro:IPR006514); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF579) (TAIR:AT3G50220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68247 : 285.0) no description available & (reliability: 606.0) & (original description: Putative IRX15, Description = Putative polysaccharide biosynthesis protein, PFAM = PF04669)' T '35.2' 'not assigned.unknown' 'niben101scf07567_2583-5533' '(at1g55230 : 360.0) Family of unknown function (DUF716) ; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF716) (TAIR:AT1G55240.1); Has 423 Blast hits to 422 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 178; Fungi - 0; Plants - 243; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68394 : 133.0) no description available & (reliability: 720.0) & (original description: Putative T1.1, Description = T1.1 protein, PFAM = PF04819)' T '35.2' 'not assigned.unknown' 'niben101scf07567_126855-129775' '(at1g55240 : 297.0) Family of unknown function (DUF716) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF716) (TAIR:AT1G55230.1); Has 435 Blast hits to 434 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 188; Fungi - 0; Plants - 245; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68394 : 129.0) no description available & (reliability: 594.0) & (original description: Putative At1g55230, Description = T1.3 protein, PFAM = PF04819)' T '35.2' 'not assigned.unknown' 'niben101scf07576_123079-157334' '(at5g28350 : 1651.0) Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Ribosome control protein 1 (InterPro:IPR009771), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Quinoprotein amine dehydrogenase, beta chain-like (InterPro:IPR011044); BEST Arabidopsis thaliana protein match is: Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor (TAIR:AT3G61480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37217 : 781.0) no description available & (gnl|cdd|70524 : 355.0) no description available & (reliability: 3302.0) & (original description: Putative At5g28350, Description = Quinoprotein amine dehydrogenase, beta chain-like / RIC1-like guanyl-nucleotide exchange factor, PFAM = PF07064)' T '35.2' 'not assigned.unknown' 'niben101scf07579_19623-24733' '(at5g50930 : 133.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone-fold (InterPro:IPR009072); Has 147 Blast hits to 147 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 59; Fungi - 65; Plants - 16; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative L484_003968, Description = Centromere protein S, PFAM = PF15630)' T '35.2' 'not assigned.unknown' 'niben101scf07579_233106-238075' '(at5g61865 : 195.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative TCM_014766, Description = JHL07K02.14 protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07579_352835-357807' '(gnl|cdd|71153 : 530.0) no description available & (at5g61820 : 468.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Stress up-regulated Nod 19 (InterPro:IPR011692); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 936.0) & (original description: Putative MtN19, Description = MtN19 protein, PFAM = PF07712)' T '35.2' 'not assigned.unknown' 'niben101scf07580_1643-4755' '(at1g09575 : 288.0) Protein of unknown function (DUF607); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF607 (InterPro:IPR006769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF607) (TAIR:AT1G57610.2); Has 384 Blast hits to 384 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 56; Plants - 127; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|38177 : 225.0) no description available & (gnl|cdd|68256 : 208.0) no description available & (reliability: 576.0) & (original description: Putative At1g57610, Description = Calcium uniporter protein 5, mitochondrial, PFAM = PF04678)' T '35.2' 'not assigned.unknown' 'niben101scf07580_738046-743127' '(at3g08600 : 162.0) Protein of unknown function (DUF1191); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1191 (InterPro:IPR010605); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1191) (TAIR:AT4G22900.1); Has 124 Blast hits to 124 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70178 : 159.0) no description available & (reliability: 324.0) & (original description: Putative PGSC0003DMG400001880, Description = Plant/F17O14-7 protein, PFAM = PF06697)' T '35.2' 'not assigned.unknown' 'niben101scf07580_778361-781455' '(at3g08600 : 180.0) Protein of unknown function (DUF1191); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1191 (InterPro:IPR010605); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1191) (TAIR:AT4G22900.1); Has 124 Blast hits to 124 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70178 : 154.0) no description available & (reliability: 360.0) & (original description: Putative 4B, Description = Plant/F17O14-7 protein, PFAM = PF06697)' T '35.2' 'not assigned.unknown' 'niben101scf07584_31693-49301' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07584_46825-49238' ' no hits & (original description: Putative , Description = NHL domain-containing protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07586_86609-90702' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07586_181177-186462' '(at1g30050 : 187.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01970.1); Has 246 Blast hits to 244 proteins in 61 species: Archae - 0; Bacteria - 8; Metazoa - 78; Fungi - 10; Plants - 117; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative 10, Description = Putative G10 domain family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07586_349722-352675' '(gnl|cdd|70178 : 241.0) no description available & (at3g08600 : 218.0) Protein of unknown function (DUF1191); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1191 (InterPro:IPR010605); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1191) (TAIR:AT4G22900.1); Has 124 Blast hits to 124 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative duf, Description = DUF1191 superfamily protein, PFAM = PF06697)' T '35.2' 'not assigned.unknown' 'niben101scf07589_288706-291518' '(gnl|cdd|68159 : 86.1) no description available & (at1g18265 : 82.8) Protein of unknown function, DUF593; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT5G16720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 165.6) & (original description: Putative Ccrd_004566, Description = Zein-binding domain-containing protein, PFAM = PF04576)' T '35.2' 'not assigned.unknown' 'niben101scf07590_103644-108174' '(at5g53160 : 278.0) Encodes RCAR3, a regulatory component of ABA receptor. Interacts with protein phosphatase 2Cs ABI1 and ABI2. Stimulates ABA signaling.; regulatory components of ABA receptor 3 (RCAR3); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: regulatory component of ABA receptor 1 (TAIR:AT1G01360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 556.0) & (original description: Putative PYL8, Description = Abscisic acid receptor PYL8, PFAM = PF10604)' T '35.2' 'not assigned.unknown' 'niben101scf07590_196592-203438' '(at2g44870 : 269.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39 proteins in 18 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 538.0) & (original description: Putative At2g44870, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07591_75883-78587' ' no hits & (original description: Putative , Description = , PFAM = PF07816)' T '35.2' 'not assigned.unknown' 'niben101scf07591_117499-121979' ' no hits & (original description: Putative , Description = Putative HBS1-like protein-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07591_229115-235783' '(gnl|cdd|86287 : 431.0) no description available & (at1g68390 : 382.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT1G68380.1); Has 622 Blast hits to 618 proteins in 34 species: Archae - 0; Bacteria - 10; Metazoa - 12; Fungi - 1; Plants - 563; Viruses - 9; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 764.0) & (original description: Putative Os02g0327500, Description = Os02g0327500 protein, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben101scf07593_197507-204288' ' no hits & (original description: Putative , Description = , PFAM = PF15365)' T '35.2' 'not assigned.unknown' 'niben101scf07593_242219-247702' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07599_779-17096' ' (original description: Putative HR4, Description = Hairy root 4, PFAM = PF14547)' T '35.2' 'not assigned.unknown' 'niben101scf07607_61970-67487' '(at1g14740 : 630.0) Protein of unknown function (DUF1423); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423, plant (InterPro:IPR004082); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1423) (TAIR:AT3G63500.1); Has 415 Blast hits to 414 proteins in 82 species: Archae - 3; Bacteria - 32; Metazoa - 64; Fungi - 8; Plants - 255; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|70683 : 524.0) no description available & (reliability: 1260.0) & (original description: Putative OBE3, Description = Protein OBERON 3, PFAM = PF16312;PF07227)' T '35.2' 'not assigned.unknown' 'niben101scf07608_111326-116303' ' no hits & (original description: Putative PGSC0003DMG400012536, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07608_402383-443516' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf07616_254644-276790' '(at2g32170 : 587.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: N2227-like (InterPro:IPR012901); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G32160.3); Has 521 Blast hits to 462 proteins in 193 species: Archae - 0; Bacteria - 2; Metazoa - 153; Fungi - 192; Plants - 76; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (gnl|cdd|38009 : 393.0) no description available & (gnl|cdd|71379 : 378.0) no description available & (reliability: 1174.0) & (original description: Putative At2g32170, Description = Putative uncharacterized protein At2g32170, PFAM = PF07942)' T '35.2' 'not assigned.unknown' 'niben101scf07619_5066-7681' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07631_184607-189009' '(at1g22790 : 125.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative UBE3N1, Description = Ubiquitin-protein ligase E3, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07631_293894-316966' '(at4g09830 : 156.0) Uncharacterised conserved protein UCP009193; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP009193 (InterPro:IPR016549); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP009193 (TAIR:AT5G64780.1); Has 86 Blast hits to 86 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative , Description = Putative nuclear receptor subfamily 2 group C member 2-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07635_943-3145' ' no hits & (original description: Putative orf121a, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07648_62314-65093' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07648_202168-207171' '(at1g50020 : 160.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 72 Blast hits to 72 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative Os11g0549900, Description = Os11g0549900 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07650_1-2252' '(gnl|cdd|69644 : 211.0) no description available & (at5g59790 : 183.0) CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF966 (InterPro:IPR010369), Uncharacterised conserved protein UCP031043 (InterPro:IPR021182); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF966) (TAIR:AT3G46110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative At2g28150, Description = At3g46110, PFAM = PF06136)' T '35.2' 'not assigned.unknown' 'niben101scf07650_19631-93727' '(at5g13660 : 248.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G59830.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 496.0) & (original description: Putative F383_01599, Description = N-lysine methyltransferase SETD8-A, PFAM = PF16135)' T '35.2' 'not assigned.unknown' 'niben101scf07650_60956-62784' ' no hits & (original description: Putative , Description = Sugar isomerase (SIS), PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07650_210850-260273' '(at2g39580 : 671.0) CONTAINS InterPro DOMAIN/s: Putative zinc-finger domain (InterPro:IPR019607); Has 249 Blast hits to 219 proteins in 85 species: Archae - 0; Bacteria - 144; Metazoa - 29; Fungi - 8; Plants - 50; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 1342.0) & (original description: Putative , Description = Putative ovule protein, PFAM = PF10650)' T '35.2' 'not assigned.unknown' 'niben101scf07662_151663-153866' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07663_15915-33031' ' no hits & (original description: Putative PGSC0003DMG400014327, Description = Putative ovule protein, PFAM = PF01429;PF01429)' T '35.2' 'not assigned.unknown' 'niben101scf07668_100897-106135' '(at1g15060 : 352.0) Uncharacterised conserved protein UCP031088, alpha/beta hydrolase; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase, At1g15070 (InterPro:IPR016969), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase (TAIR:AT1G73750.1); Has 177 Blast hits to 156 proteins in 44 species: Archae - 2; Bacteria - 72; Metazoa - 2; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 704.0) & (original description: Putative PGSC0003DMG400026880, Description = Alpha/beta fold hydrolase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07672_71004-76208' '(at5g52370 : 154.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative BnaC09g34310D, Description = BnaC09g34310D protein, PFAM = PF16053)' T '35.2' 'not assigned.unknown' 'niben101scf07673_297450-299860' ' no hits & (original description: Putative glysoja_030340, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF13976)' T '35.2' 'not assigned.unknown' 'niben101scf07678_659699-670189' '(at5g50890 : 514.0) alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G05260.1); Has 209 Blast hits to 209 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 209; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1028.0) & (original description: Putative ATPHAN, Description = Protein glycosylationmyb-like TTH transcriptional regulator, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07678_807123-810003' '(at2g42975 : 174.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; Has 32 Blast hits to 32 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative PGSC0003DMG400017304, Description = Putative uncharacterized protein At2g42975, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07680_408586-417374' '(at4g33140 : 316.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: phosphatase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 5'(3')-deoxyribonucleotidase (InterPro:IPR010708); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 632.0) & (original description: Putative At4g33140, Description = Putative ovule protein, PFAM = PF06941)' T '35.2' 'not assigned.unknown' 'niben101scf07681_267919-274751' '(at2g27090 : 646.0) Protein of unknown function (DUF630 and DUF632); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT4G39790.1); Has 977 Blast hits to 876 proteins in 150 species: Archae - 2; Bacteria - 21; Metazoa - 160; Fungi - 127; Plants - 553; Viruses - 15; Other Eukaryotes - 99 (source: NCBI BLink). & (gnl|cdd|68357 : 299.0) no description available & (reliability: 1292.0) & (original description: Putative At2g27090, Description = At2g27090, PFAM = PF04782;PF04783)' T '35.2' 'not assigned.unknown' 'niben101scf07687_158892-161755' ' no hits & (original description: Putative PGSC0003DMG400017154, Description = Family of Uncharacterized protein function, putative, PFAM = PF04819)' T '35.2' 'not assigned.unknown' 'niben101scf07688_70132-72653' ' no hits & (original description: Putative PGSC0003DMG400011190, Description = Putative ovule protein, PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'niben101scf07688_81982-84509' ' no hits & (original description: Putative PGSC0003DMG400046440, Description = Putative ovule protein, PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'niben101scf07688_83887-88149' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07695_157553-160032' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07695_185398-186976' ' no hits & (original description: Putative orf128, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07709_163363-169830' '(at2g16070 : 179.0) An integral outer envelope membrane protein (its homolog in A thaliana PDV1), component of the plastid division machinery. Similar to ARC6, PDV2 localizes to a continuous ring at the division site in wild-type plants. PDV1 and PDV2 are required for localization of ARC5 at the chloroplast division site.; PLASTID DIVISION2 (PDV2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: plastid fission; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: plastid division1 (TAIR:AT5G53280.1); Has 92 Blast hits to 92 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 86; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative PDV2, Description = Plastid division protein PDV2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07709_183061-188797' '(at5g66600 : 348.0) Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT2G23700.1). & (gnl|cdd|68359 : 187.0) no description available & (reliability: 696.0) & (original description: Putative At2g23700, Description = BnaA04g13840D protein, PFAM = PF14389;PF04784)' T '35.2' 'not assigned.unknown' 'niben101scf07712_10051-15654' '(at4g24380 : 321.0) CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37762 : 193.0) no description available & (reliability: 642.0) & (original description: Putative At5g65400, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF03959)' T '35.2' 'not assigned.unknown' 'niben101scf07712_10069-13694' '(at4g24380 : 252.0) CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37762 : 164.0) no description available & (reliability: 504.0) & (original description: Putative TIDP2761, Description = Serine hydrolase family protein, PFAM = PF03959)' T '35.2' 'not assigned.unknown' 'niben101scf07720_80930-84557' ' no hits & (original description: Putative T1B9.10, Description = At3g07230, PFAM = PF08186)' T '35.2' 'not assigned.unknown' 'niben101scf07720_84952-87476' '(at3g25130 : 85.5) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; Has 3885 Blast hits to 2658 proteins in 280 species: Archae - 12; Bacteria - 208; Metazoa - 970; Fungi - 222; Plants - 148; Viruses - 11; Other Eukaryotes - 2314 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative PGSC0003DMG400017495, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07724_90125-102981' '(at5g12900 : 484.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 968.0) & (original description: Putative IRKI, Description = IRK-interacting protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07727_257413-259625' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07728_21273-25153' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF00646;PF08268)' T '35.2' 'not assigned.unknown' 'niben101scf07728_24955-32273' '(at1g17080 : 127.0) Ribosomal protein L18ae family; BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT1G53560.1); Has 119 Blast hits to 119 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 119; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative RPL18aA, Description = 60S ribosomal protein L18aA, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07728_25154-32270' '(at1g17080 : 122.0) Ribosomal protein L18ae family; BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT1G53560.1); Has 119 Blast hits to 119 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 119; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative RPL18aA, Description = 60S ribosomal protein L18a-1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07728_128493-132020' ' no hits & (original description: Putative , Description = , PFAM = PF08879)' T '35.2' 'not assigned.unknown' 'niben101scf07728_231395-234251' ' no hits & (original description: Putative glysoja_007451, Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07729_246183-256133' '(at5g22820 : 314.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024). & (reliability: 628.0) & (original description: Putative ARALYDRAFT_662088, Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07729_248238-256140' '(at5g22820 : 338.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024). & (reliability: 676.0) & (original description: Putative ARALYDRAFT_662088, Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07736_49282-60002' '(at4g24290 : 662.0) MAC/Perforin domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Membrane attack complex component/perforin (MACPF) domain (InterPro:IPR020864), Membrane attack complex component/perforin (MACPF) domain, metazoa (InterPro:IPR020865); BEST Arabidopsis thaliana protein match is: MAC/Perforin domain-containing protein (TAIR:AT1G28380.1); Has 264 Blast hits to 263 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 51; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|47763 : 80.1) no description available & (reliability: 1324.0) & (original description: Putative CAD1, Description = MAC/Perforin domain-containing protein isoform 2, PFAM = PF01823)' T '35.2' 'not assigned.unknown' 'niben101scf07741_212353-217678' '(at3g21200 : 351.0) proton gradient regulation 7 (PGR7); Has 162 Blast hits to 162 proteins in 45 species: Archae - 0; Bacteria - 40; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (reliability: 702.0) & (original description: Putative GLUTRBP, Description = Glutamyl-tRNA reductase-binding protein, chloroplastic, PFAM = PF10615)' T '35.2' 'not assigned.unknown' 'niben101scf07743_356434-358778' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07748_110137-113251' ' no hits & (original description: Putative his5, Description = His5 protein, PFAM = PF00538)' T '35.2' 'not assigned.unknown' 'niben101scf07749_28184-30327' ' no hits & (original description: Putative RTFL17, Description = At1g13245, PFAM = PF08137)' T '35.2' 'not assigned.unknown' 'niben101scf07751_144163-148485' ' no hits & (original description: Putative , Description = Ribosomal RNA small subunit methyltransferase A, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07757_4218-20638' '(at2g47115 : 223.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative BnaC03g72460D, Description = BnaC03g72460D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07757_6458-19932' '(at2g47115 : 94.7) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 189.4) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07757_71373-74181' ' (original description: Putative PI, Description = Trypsin proteinase inhibitor, PFAM = PF02428;PF02428;PF02428)' T '35.2' 'not assigned.unknown' 'niben101scf07763_141014-145833' '(at3g14170 : 402.0) Plant protein of unknown function (DUF936); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF936, plant (InterPro:IPR010341); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF936) (TAIR:AT1G08760.1); Has 314 Blast hits to 224 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0; Plants - 291; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|69589 : 392.0) no description available & (reliability: 804.0) & (original description: Putative MTR_0050s0010, Description = DUF936 family protein, PFAM = PF06075;PF06075;PF06075)' T '35.2' 'not assigned.unknown' 'niben101scf07778_249701-253937' '(gnl|cdd|69172 : 356.0) no description available & (at5g61930 : 314.0) ACCUMULATION OF PHOTOSYSTEM ONE 3; ACCUMULATION OF PHOTOSYSTEM ONE 3 (APO3); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF794, plant (InterPro:IPR008512); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF794) (TAIR:AT1G64810.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 628.0) & (original description: Putative APO3, Description = APO protein 3, mitochondrial, PFAM = PF05634;PF05634)' T '35.2' 'not assigned.unknown' 'niben101scf07778_293607-296083' '(at3g52740 : 98.6) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44450.1); Has 65 Blast hits to 65 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 197.2) & (original description: Putative At3g44450, Description = AT3g52740/F3C22_140, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07778_445554-448684' ' no hits & (original description: Putative , Description = , PFAM = PF00646;PF08268)' T '35.2' 'not assigned.unknown' 'niben101scf07782_85026-89137' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07783_240604-248511' ' no hits & (original description: Putative Os01g0275950, Description = Os01g0275950 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07788_65272-88186' ' no hits & (original description: Putative At5g40450, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07788_110143-112460' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07788_127969-130777' ' no hits & (original description: Putative PGSC0003DMG400025255, Description = Cohesin subunit rad21, putative isoform 1, PFAM = PF04825)' T '35.2' 'not assigned.unknown' 'niben101scf07788_160873-171901' '(at5g14020 : 407.0) Endosomal targeting BRO1-like domain-containing protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: vacuole; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); BEST Arabidopsis thaliana protein match is: Endosomal targeting BRO1-like domain-containing protein (TAIR:AT1G73390.3); Has 94 Blast hits to 94 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 814.0) & (original description: Putative At5g14020, Description = Endosomal targeting BRO1-like domain-containing protein, PFAM = PF03097)' T '35.2' 'not assigned.unknown' 'niben101scf07788_346064-364163' '(at5g40500 : 131.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 22 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 262.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07788_407451-417805' '(at3g27570 : 278.0) Sucrase/ferredoxin-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Sucraseferredoxin-like (InterPro:IPR009737), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Sucrase/ferredoxin-like family protein (TAIR:AT5G40510.1); Has 487 Blast hits to 487 proteins in 162 species: Archae - 6; Bacteria - 90; Metazoa - 0; Fungi - 283; Plants - 71; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|70464 : 214.0) no description available & (reliability: 556.0) & (original description: Putative ferredoxin homolog, Description = Clostridium pasteurianum ferredoxin homolog, PFAM = PF06999)' T '35.2' 'not assigned.unknown' 'niben101scf07788_439023-457358' ' (original description: Putative PGSC0003DMG400012634, Description = , PFAM = PF03023;PF03023)' T '35.2' 'not assigned.unknown' 'niben101scf07790_199272-201477' ' no hits & (original description: Putative , Description = Putative beta-glucosidase 47-like, PFAM = PF00232)' T '35.2' 'not assigned.unknown' 'niben101scf07790_331375-333776' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07790_383557-387133' ' no hits & (original description: Putative , Description = , PFAM = PF00612;PF00612)' T '35.2' 'not assigned.unknown' 'niben101scf07790_404913-408808' '(at4g21890 : 342.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; Has 14 Blast hits to 14 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 684.0) & (original description: Putative T8O5.100, Description = At4g21890, PFAM = PF01753)' T '35.2' 'not assigned.unknown' 'niben101scf07792_24283-46194' ' no hits & (original description: Putative PGSC0003DMG401030137, Description = Nuclear transcription factor Y subunit C7, PFAM = PF00808)' T '35.2' 'not assigned.unknown' 'niben101scf07793_24295-35342' '(at3g48210 : 208.0) CONTAINS InterPro DOMAIN/s: Kinetochore-Ndc80 complex, subunit Spc25 (InterPro:IPR013255); Has 194 Blast hits to 194 proteins in 72 species: Archae - 0; Bacteria - 4; Metazoa - 72; Fungi - 39; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (gnl|cdd|39856 : 110.0) no description available & (reliability: 416.0) & (original description: Putative At3g48210, Description = Kinetochore Spc25 domain-containing protein, PFAM = PF08234)' T '35.2' 'not assigned.unknown' 'niben101scf07797_433439-437572' ' no hits & (original description: Putative At5g63905, Description = At5g63905, PFAM = PF15811)' T '35.2' 'not assigned.unknown' 'niben101scf07798_755-3870' '(at3g13980 : 159.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54200.1); Has 1485 Blast hits to 418 proteins in 98 species: Archae - 0; Bacteria - 6; Metazoa - 246; Fungi - 61; Plants - 107; Viruses - 6; Other Eukaryotes - 1059 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative BnaA06g00600D, Description = BnaA06g00600D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07798_372538-376876' ' no hits & (original description: Putative SlSRG1, Description = Salt responsive protein 1, PFAM = PF06200;PF09425)' T '35.2' 'not assigned.unknown' 'niben101scf07809_124544-127422' ' (original description: Putative ltp, Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'niben101scf07809_176038-179077' ' (original description: Putative ltp, Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'niben101scf07820_123854-127967' ' (original description: Putative BnaA08g25610D, Description = BnaA08g25610D protein, PFAM = PF09713)' T '35.2' 'not assigned.unknown' 'niben101scf07822_55438-57740' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Putative reverse transcriptase family member, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07822_140721-143839' '(at3g13980 : 161.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54200.1); Has 1485 Blast hits to 418 proteins in 98 species: Archae - 0; Bacteria - 6; Metazoa - 246; Fungi - 61; Plants - 107; Viruses - 6; Other Eukaryotes - 1059 (source: NCBI BLink). & (reliability: 322.0) & (original description: Putative At3g13980, Description = Protein BIG GRAIN 1-like A, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07825_211142-227519' '(at5g12470 : 405.0) Protein of unknown function (DUF3411); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF399 and DUF3411) (TAIR:AT2G40400.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 810.0) & (original description: Putative RER4, Description = DUF3411 domain protein, PFAM = PF11891)' T '35.2' 'not assigned.unknown' 'niben101scf07825_454642-462915' '(at5g18250 : 169.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative At5g18250, Description = At5g18250, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07827_13053-23595' '(at4g29960 : 197.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative BnaC03g68130D, Description = BnaC03g68130D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07827_52703-59173' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07829_6562-20395' '(at1g15370 : 263.0) SNARE-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longin-like (InterPro:IPR011012); Has 91 Blast hits to 91 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 12; Plants - 67; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative pco095958, Description = Longin-like domain-containing protein, PFAM = PF01217)' T '35.2' 'not assigned.unknown' 'niben101scf07829_75225-81342' '(at1g52630 : 675.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT5G35570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66790 : 359.0) no description available & (reliability: 1350.0) & (original description: Putative At1g52630, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T '35.2' 'not assigned.unknown' 'niben101scf07829_107072-109395' ' no hits & (original description: Putative , Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben101scf07829_283611-286257' '(at5g11280 : 159.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative At1g80200, Description = BnaA02g19930D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07829_334491-337411' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07829_348960-351528' ' (original description: Putative LEA, Description = Late embryogenesis abundant protein (LEA) family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07829_475376-483340' '(at1g74530 : 362.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 724.0) & (original description: Putative Os08g0171000, Description = Os08g0171000 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07838_48347-65007' ' no hits & (original description: Putative RFC4, Description = OsRFC4, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07838_49110-65555' ' no hits & (original description: Putative rfc2, Description = Replication factor C subunit 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07841_1-13244' '(at5g16550 : 103.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative Sb07g020770, Description = Putative uncharacterized protein Sb07g020770, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07849_123291-126076' '(at3g12650 : 142.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 31 Blast hits to 31 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative T2E22.4, Description = AT3g12650/T2E22_103, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07850_577333-589106' '(at5g22350 : 464.0) ELONGATED MITOCHONDRIA 1 (ELM1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1022 (InterPro:IPR009367); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1022) (TAIR:AT5G06180.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69763 : 351.0) no description available & (reliability: 928.0) & (original description: Putative ELM1, Description = Mitochondrial fission protein ELM1, PFAM = PF06258)' T '35.2' 'not assigned.unknown' 'niben101scf07850_683862-718642' '(at3g11560 : 897.0) LETM1-like protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LETM1-like (InterPro:IPR011685); BEST Arabidopsis thaliana protein match is: LETM1-like protein (TAIR:AT5G06220.2); Has 461 Blast hits to 445 proteins in 157 species: Archae - 0; Bacteria - 8; Metazoa - 136; Fungi - 162; Plants - 104; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (gnl|cdd|36261 : 225.0) no description available & (reliability: 1794.0) & (original description: Putative At3g11560, Description = AT3G11560 protein, PFAM = PF07766)' T '35.2' 'not assigned.unknown' 'niben101scf07850_693424-696247' '(at3g11560 : 235.0) LETM1-like protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LETM1-like (InterPro:IPR011685); BEST Arabidopsis thaliana protein match is: LETM1-like protein (TAIR:AT5G06220.2); Has 461 Blast hits to 445 proteins in 157 species: Archae - 0; Bacteria - 8; Metazoa - 136; Fungi - 162; Plants - 104; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (reliability: 470.0) & (original description: Putative At3g11560, Description = LETM1-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07850_717672-751023' '(at3g11570 : 479.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 8 (TBL8); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 9 (TAIR:AT5G06230.1); Has 1362 Blast hits to 1341 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 6; Plants - 1353; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|72785 : 143.0) no description available & (reliability: 958.0) & (original description: Putative TBL8, Description = Protein trichome birefringence-like 8, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf07851_191897-202317' '(at2g28370 : 233.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G37200.1); Has 210 Blast hits to 210 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 210; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative At2g28370, Description = CASP-like protein 5A2, PFAM = PF04535)' T '35.2' 'not assigned.unknown' 'niben101scf07854_15645-26144' '(at3g55350 : 434.0) PIF / Ping-Pong family of plant transposases; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G63270.1); Has 1213 Blast hits to 1213 proteins in 135 species: Archae - 0; Bacteria - 2; Metazoa - 520; Fungi - 50; Plants - 592; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|39785 : 190.0) no description available & (reliability: 868.0) & (original description: Putative At3g63270, Description = Putative uncharacterized protein At3g63270, PFAM = PF13359)' T '35.2' 'not assigned.unknown' 'niben101scf07854_89355-94912' '(gnl|cdd|69644 : 361.0) no description available & (at5g59790 : 349.0) CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF966 (InterPro:IPR010369), Uncharacterised conserved protein UCP031043 (InterPro:IPR021182); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF966) (TAIR:AT3G46110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 698.0) & (original description: Putative At3g46110, Description = At3g46110, PFAM = PF06136)' T '35.2' 'not assigned.unknown' 'niben101scf07863_41659-46533' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07863_50758-53135' '(at2g17705 : 192.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08330.1); Has 135 Blast hits to 135 proteins in 32 species: Archae - 5; Bacteria - 29; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative BnaA07g02870D, Description = BnaA07g02870D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07868_67908-71320' ' no hits & (original description: Putative TCM_010157, Description = CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07880_450453-455015' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07882_22444-38053' '(at2g16485 : 807.0) nucleic acid binding;zinc ion binding;DNA binding; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: histone modification, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Plus-3 domain, subgroup (InterPro:IPR018144), Zinc finger, PHD-type (InterPro:IPR001965), GYF (InterPro:IPR003169), SWIB/MDM2 domain (InterPro:IPR003121), Plus-3 (InterPro:IPR004343), SWIB domain (InterPro:IPR019835), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding (TAIR:AT3G51120.1); Has 38357 Blast hits to 25980 proteins in 1833 species: Archae - 670; Bacteria - 4778; Metazoa - 14464; Fungi - 4561; Plants - 3104; Viruses - 298; Other Eukaryotes - 10482 (source: NCBI BLink). & (gnl|cdd|37157 : 144.0) no description available & (gnl|cdd|47987 : 125.0) no description available & (reliability: 1614.0) & (original description: Putative BnaA09g08750D, Description = BnaA09g08750D protein, PFAM = PF03126;PF02213;PF02201)' T '35.2' 'not assigned.unknown' 'niben101scf07883_287521-291821' '(at3g58110 : 306.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42370.1). & (reliability: 612.0) & (original description: Putative PGSC0003DMG400009404, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07893_173697-184461' '(at3g54310 : 113.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G38430.1); Has 44 Blast hits to 41 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative PGSC0003DMG400047079, Description = Dna-directed rna polymerase subunit alpha, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07894_86775-89317' '(at1g29195 : 171.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 180 Blast hits to 180 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 342.0) & (original description: Putative F28N24.12, Description = At1g29190/F28N24_12, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf07895_10138-14070' '(at5g62960 : 331.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 662.0) & (original description: Putative Os02g0130600, Description = Os02g0130600 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07895_146122-149400' '(at4g14590 : 340.0) embryo defective 2739 (emb2739); CONTAINS InterPro DOMAIN/s: Integrator complex, subunit 3 (InterPro:IPR019333); Has 179 Blast hits to 170 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (gnl|cdd|39463 : 192.0) no description available & (reliability: 680.0) & (original description: Putative INTS3, Description = Integrator complex subunit 3, PFAM = PF10189)' T '35.2' 'not assigned.unknown' 'niben101scf07895_690696-693028' ' no hits & (original description: Putative PGSC0003DMG400027074, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07926_7339-13979' '(at5g10060 : 364.0) ENTH/VHS family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT5G65180.1); Has 5399 Blast hits to 5001 proteins in 612 species: Archae - 19; Bacteria - 730; Metazoa - 2186; Fungi - 823; Plants - 382; Viruses - 37; Other Eukaryotes - 1222 (source: NCBI BLink). & (gnl|cdd|37880 : 227.0) no description available & (gnl|cdd|47880 : 113.0) no description available & (reliability: 728.0) & (original description: Putative At5g65180, Description = ENTH/VHS family protein, PFAM = PF04818)' T '35.2' 'not assigned.unknown' 'niben101scf07926_964658-967803' '(at5g11000 : 210.0) Plant protein of unknown function (DUF868); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT2G25200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|69434 : 187.0) no description available & (reliability: 420.0) & (original description: Putative T30N20_270, Description = AT5g11000/T30N20_270, PFAM = PF05910)' T '35.2' 'not assigned.unknown' 'niben101scf07932_8443-12428' '(at1g23070 : 486.0) Protein of unknown function (DUF300); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT4G38360.2); Has 840 Blast hits to 837 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 286; Fungi - 190; Plants - 245; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (gnl|cdd|67249 : 317.0) no description available & (gnl|cdd|37852 : 267.0) no description available & (reliability: 972.0) & (original description: Putative At1g23070, Description = Protein LAZ1 homolog 2, PFAM = PF03619)' T '35.2' 'not assigned.unknown' 'niben101scf07937_127022-130884' '(at2g43250 : 586.0) unknown protein; Has 32 Blast hits to 32 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1172.0) & (original description: Putative BnaA04g24920D, Description = BnaA04g24920D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07937_173743-189396' '(at3g59300 : 412.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G24060.1); Has 75 Blast hits to 73 proteins in 16 species: Archae - 0; Bacteria - 6; Metazoa - 1; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 824.0) & (original description: Putative BnaA09g37670D, Description = BnaA09g37670D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07937_291806-307038' '(at5g21160 : 489.0) LA RNA-binding protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Protein of unknown function DM15 (InterPro:IPR006607); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT4G35890.1). & (gnl|cdd|47984 : 96.8) no description available & (reliability: 978.0) & (original description: Putative larp, Description = La-related protein 1, PFAM = PF05383)' T '35.2' 'not assigned.unknown' 'niben101scf07942_56888-61163' '(at5g25250 : 520.0) SPFH/Band 7/PHB domain-containing membrane-associated protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT5G25260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37879 : 382.0) no description available & (gnl|cdd|48211 : 96.4) no description available & (reliability: 1040.0) & (original description: Putative FLOT4, Description = Flotillin-like protein 4, PFAM = PF01145)' T '35.2' 'not assigned.unknown' 'niben101scf07942_445069-448591' '(at2g45320 : 117.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; Has 45 Blast hits to 45 proteins in 16 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative At2g45320, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07945_211300-216377' '(at4g40020 : 149.0) Myosin heavy chain-related protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT5G16730.1); Has 160438 Blast hits to 85353 proteins in 3205 species: Archae - 2021; Bacteria - 26641; Metazoa - 65466; Fungi - 13044; Plants - 8368; Viruses - 589; Other Eukaryotes - 44309 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative PGSC0003DMG400016153, Description = BnaAnng26740D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07965_27429-38241' '(at1g24560 : 517.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49055.1); Has 71940 Blast hits to 38124 proteins in 2481 species: Archae - 1358; Bacteria - 12126; Metazoa - 32861; Fungi - 6786; Plants - 4024; Viruses - 195; Other Eukaryotes - 14590 (source: NCBI BLink). & (reliability: 1034.0) & (original description: Putative At1g24560, Description = Putative myosin heavy chain, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07965_208513-212002' '(at1g67790 : 258.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01680.1); Has 208 Blast hits to 125 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 516.0) & (original description: Putative , Description = , PFAM = PF14577)' T '35.2' 'not assigned.unknown' 'niben101scf07969_88218-91768' '(gnl|cdd|66792 : 333.0) no description available & (at3g50120 : 284.0) Plant protein of unknown function (DUF247); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50170.1); Has 1189 Blast hits to 1046 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1189; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 568.0) & (original description: Putative Sb05g020790, Description = Putative uncharacterized protein Sb05g020790, PFAM = PF03140)' T '35.2' 'not assigned.unknown' 'niben101scf07969_210201-219833' '(at1g10417 : 164.0) Encodes protein with unknown function whose expression is repressed by inoculation with Agrobacterium tumerifaciens.; unknown protein; Has 26006 Blast hits to 16906 proteins in 1326 species: Archae - 433; Bacteria - 3134; Metazoa - 12646; Fungi - 2033; Plants - 1219; Viruses - 58; Other Eukaryotes - 6483 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative TCM_010077, Description = Encodes protein with Uncharacterized protein function whose expression is repressed by inoculation with Agrobacterium tumerifaciens isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07972_166255-168566' ' no hits & (original description: Putative Os08g0266200, Description = Os08g0266200 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07974_5446-35559' '(at1g60460 : 331.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 662.0) & (original description: Putative MTOPVIB, Description = Type 2 DNA topoisomerase 6 subunit B-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07974_421451-423943' ' no hits & (original description: Putative , Description = , PFAM = PF01693)' T '35.2' 'not assigned.unknown' 'niben101scf07980_64245-70084' '(at5g43680 : 103.0) unknown protein; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 206.0) & (original description: Putative At5g43680, Description = AT5g43680/MQO24_4, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07980_135140-143554' '(at2g21070 : 565.0) FIONA1 (FIO1); FUNCTIONS IN: methyltransferase activity; INVOLVED IN: photoperiodism, flowering, circadian rhythm, photoperiodism; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosyl-L-methionine dependent methyltransferase, Mett10D, predicted (InterPro:IPR017182), S-adenosyl-L-methionine dependent methyltransferase, predicted (InterPro:IPR010286). & (gnl|cdd|38123 : 318.0) no description available & (gnl|cdd|86991 : 247.0) no description available & (reliability: 1130.0) & (original description: Putative FIO1, Description = Methyltransferase-like protein, PFAM = PF05971;PF05971)' T '35.2' 'not assigned.unknown' 'niben101scf07981_42531-47857' '(at5g03560 : 168.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: nucleobase:cation symporter activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G38150.2); Has 33122 Blast hits to 10382 proteins in 236 species: Archae - 3; Bacteria - 11; Metazoa - 102; Fungi - 213; Plants - 32082; Viruses - 0; Other Eukaryotes - 711 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative Os08g0560600, Description = Os08g0560600 protein, PFAM = PF09350)' T '35.2' 'not assigned.unknown' 'niben101scf07981_88635-96128' '(at3g53120 : 168.0) VPS37-1; CONTAINS InterPro DOMAIN/s: Modifier of rudimentary, Modr (InterPro:IPR009851); BEST Arabidopsis thaliana protein match is: Modifier of rudimentary (Mod(r)) protein (TAIR:AT2G36680.1); Has 448 Blast hits to 448 proteins in 101 species: Archae - 0; Bacteria - 6; Metazoa - 285; Fungi - 19; Plants - 79; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|38480 : 121.0) no description available & (gnl|cdd|87233 : 118.0) no description available & (reliability: 336.0) & (original description: Putative IDP343, Description = Modifier of rudimentary (Mod(R)) protein, PFAM = PF07200)' T '35.2' 'not assigned.unknown' 'niben101scf07984_136644-139095' ' no hits & (original description: Putative , Description = OSJNBa0004L19.22 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf07984_518575-549716' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf07991_54124-56543' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf08000_110251-113051' '(gnl|cdd|66742 : 118.0) no description available & (at4g35690 : 92.8) Arabidopsis protein of unknown function (DUF241); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT4G35710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 185.6) & (original description: Putative PGSC0003DMG400001539, Description = DUF241 domain protein, PFAM = PF03087)' T '35.2' 'not assigned.unknown' 'niben101scf08001_267781-272791' '(gnl|cdd|69589 : 276.0) no description available & (at3g19610 : 124.0) Plant protein of unknown function (DUF936); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF936, plant (InterPro:IPR010341); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF936) (TAIR:AT1G08760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative At3g19610, Description = BnaA03g35340D protein, PFAM = PF06075)' T '35.2' 'not assigned.unknown' 'niben101scf08001_307940-310269' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08002_87603-90333' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08002_150432-153529' ' no hits & (original description: Putative At5g07820, Description = Calmodulin-binding protein-like protein, PFAM = PF07839)' T '35.2' 'not assigned.unknown' 'niben101scf08002_204244-210054' ' no hits & (original description: Putative PGSC0003DMG400025138, Description = Zinc finger, U1-type, PFAM = PF12874;PF12874;PF12874)' T '35.2' 'not assigned.unknown' 'niben101scf08002_356381-358961' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08015_411718-414785' ' no hits & (original description: Putative , Description = , PFAM = PF03478;PF00646)' T '35.2' 'not assigned.unknown' 'niben101scf08015_434478-436897' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08033_118560-124282' ' (original description: Putative DREB2E, Description = GTPase obg, PFAM = PF01018)' T '35.2' 'not assigned.unknown' 'niben101scf08033_347666-350391' '(at5g43680 : 166.0) unknown protein; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 332.0) & (original description: Putative At5g43680, Description = AT5g43680/MQO24_4, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08039_51268-54693' ' (original description: Putative PGSC0003DMG400040226, Description = Agamous-like MADS-box protein A, putative, PFAM = PF00319)' T '35.2' 'not assigned.unknown' 'niben101scf08044_69505-71849' ' no hits & (original description: Putative LSU2, Description = At5g24660, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08044_200618-209004' '(at3g49590 : 380.0) Autophagy-related protein 13; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 13 (InterPro:IPR018731); BEST Arabidopsis thaliana protein match is: Autophagy-related protein 13 (TAIR:AT3G18770.1). & (gnl|cdd|39773 : 225.0) no description available & (reliability: 760.0) & (original description: Putative ATG13A, Description = Autophagy-related protein 13a, PFAM = PF10033)' T '35.2' 'not assigned.unknown' 'niben101scf08045_205593-207826' ' (original description: Putative PHYPADRAFT_206544, Description = Predicted protein, PFAM = PF08038)' T '35.2' 'not assigned.unknown' 'niben101scf08045_292942-295769' '(at1g27930 : 313.0) Function unknown. Interacts with eIF3.; FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF579 (InterPro:IPR021148), Conserved hypothetical protein CHP01627 (InterPro:IPR006514); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF579) (TAIR:AT1G67330.1); Has 251 Blast hits to 250 proteins in 20 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 239; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|68247 : 309.0) no description available & (reliability: 626.0) & (original description: Putative At1g27930, Description = Probable methyltransferase At1g27930, PFAM = PF04669)' T '35.2' 'not assigned.unknown' 'niben101scf08047_63164-65985' '(gnl|cdd|66742 : 116.0) no description available & (at2g17080 : 110.0) Arabidopsis protein of unknown function (DUF241); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT2G17070.1); Has 750 Blast hits to 734 proteins in 87 species: Archae - 2; Bacteria - 37; Metazoa - 79; Fungi - 28; Plants - 534; Viruses - 2; Other Eukaryotes - 68 (source: NCBI BLink). & (reliability: 220.0) & (original description: Putative TCM_006487, Description = Eukaryotic translation initiation factor 3 subunit A, putative, PFAM = PF03087)' T '35.2' 'not assigned.unknown' 'niben101scf08047_345362-351057' '(at1g16210 : 172.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1014 (InterPro:IPR010422); Has 16107 Blast hits to 8386 proteins in 1107 species: Archae - 26; Bacteria - 3370; Metazoa - 4013; Fungi - 1516; Plants - 526; Viruses - 120; Other Eukaryotes - 6536 (source: NCBI BLink). & (gnl|cdd|87049 : 115.0) no description available & (gnl|cdd|38433 : 104.0) no description available & (reliability: 344.0) & (original description: Putative BnaA07g38860D, Description = BnaA07g38860D protein, PFAM = PF06244)' T '35.2' 'not assigned.unknown' 'niben101scf08047_463650-478849' '(at5g51840 : 224.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative ACI13, Description = ACI13, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08065_217288-221947' '(at2g33585 : 120.0) unknown protein; Has 31 Blast hits to 31 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative Os08g0512900, Description = Os08g0512900 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08072_24293-32655' '(at5g06560 : 391.0) Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT3G11850.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68159 : 113.0) no description available & (reliability: 782.0) & (original description: Putative MYOB7, Description = Zein-binding domain-containing protein, PFAM = PF04576)' T '35.2' 'not assigned.unknown' 'niben101scf08072_37869-53983' '(at3g54750 : 435.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages. & (reliability: 870.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08072_43757-49292' '(at3g54750 : 149.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages. & (reliability: 298.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08078_148210-154216' ' no hits & (original description: Putative PGSC0003DMG400005532, Description = Putative ovule protein, PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben101scf08078_283831-287090' '(at3g27230 : 570.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G40830.2); Has 347 Blast hits to 346 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 345; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1140.0) & (original description: Putative At3g27230, Description = At3g27230, PFAM = PF03141)' T '35.2' 'not assigned.unknown' 'niben101scf08078_288148-290690' '(gnl|cdd|73156 : 105.0) no description available & (at1g43760 : 88.2) DNAse I-like superfamily protein; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G40390.1); Has 1816 Blast hits to 1744 proteins in 56 species: Archae - 0; Bacteria - 6; Metazoa - 164; Fungi - 4; Plants - 1633; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative At2g01550, Description = Putative non-LTR retroelement reverse transcriptase, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf08080_261122-265584' ' no hits & (original description: Putative MKS1, Description = AtVQ21, PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf08088_458724-460392' ' no hits & (original description: Putative LTR3, Description = LTRGag-pol-polymerase 3, PFAM = PF13976)' T '35.2' 'not assigned.unknown' 'niben101scf08088_459212-461663' ' no hits & (original description: Putative , Description = , PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf08089_79151-98975' '(at5g13260 : 397.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48860.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 794.0) & (original description: Putative SCD2, Description = Coiled-coil domain-containing protein SCD2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08097_80493-83104' '(at1g11700 : 152.0) Protein of unknown function, DUF584; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT1G61930.1); Has 334 Blast hits to 333 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 328; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68105 : 99.0) no description available & (reliability: 304.0) & (original description: Putative F25C20.15, Description = At1g11700, PFAM = PF04520)' T '35.2' 'not assigned.unknown' 'niben101scf08097_242645-244977' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08108_43158-47609' '(at2g29670 : 437.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G07280.3); Has 535 Blast hits to 340 proteins in 62 species: Archae - 10; Bacteria - 119; Metazoa - 2; Fungi - 0; Plants - 351; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 874.0) & (original description: Putative At2g29670, Description = Putative uncharacterized protein At2g29670, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08111_127147-128977' '(at5g17190 : 203.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 406.0) & (original description: Putative PGSC0003DMG400029475, Description = Erwinia induced protein 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08111_443784-449584' '(at1g70750 : 229.0) Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT5G16720.1); Has 8718 Blast hits to 6591 proteins in 581 species: Archae - 113; Bacteria - 587; Metazoa - 3699; Fungi - 664; Plants - 753; Viruses - 66; Other Eukaryotes - 2836 (source: NCBI BLink). & (gnl|cdd|68159 : 114.0) no description available & (reliability: 458.0) & (original description: Putative Os03g0708700, Description = Os03g0708700 protein, PFAM = PF04576)' T '35.2' 'not assigned.unknown' 'niben101scf08121_217131-219941' ' no hits & (original description: Putative PGSC0003DMG400016538, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08123_48425-50784' ' no hits & (original description: Putative str246N, Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08127_38508-47013' '(at2g03800 : 441.0) encodes a D-aminoacyl-tRNA deacylase. Involved in detoxification of D-aminoacyl-tRNA. Mutants also show ethanol-hypersensitive phenotype.; GEKO1 (GEK1); CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP016210 (InterPro:IPR018033), D-aminoacyl-tRNA deacylase (InterPro:IPR007508); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86658 : 219.0) no description available & (reliability: 882.0) & (original description: Putative GEK1, Description = D-aminoacyl-tRNA deacylase, PFAM = PF04414)' T '35.2' 'not assigned.unknown' 'niben101scf08127_190990-260280' ' no hits & (original description: Putative GagPol3, Description = Putative retroelement pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08127_342349-346399' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08134_9703-12074' ' no hits & (original description: Putative At2g06320, Description = Retroelement pol polyprotein-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08137_128782-133917' '(at1g73240 : 416.0) CONTAINS InterPro DOMAIN/s: Nucleoporin protein Ndc1-Nup (InterPro:IPR019049); Has 36 Blast hits to 36 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 832.0) & (original description: Putative NbNDC1b, Description = Nuclear pore complex protein NDC1b, PFAM = PF09531;PF09531)' T '35.2' 'not assigned.unknown' 'niben101scf08141_128157-131344' '(at3g05390 : 303.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G01240.1); Has 507 Blast hits to 498 proteins in 33 species: Archae - 4; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 493; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 606.0) & (original description: Putative PGSC0003DMG400014609, Description = ATRAD3, putative, PFAM = PF03141)' T '35.2' 'not assigned.unknown' 'niben101scf08142_5988-17738' '(at1g73140 : 551.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TBL31; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT5G01360.1); Has 1344 Blast hits to 1323 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 1338; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|72785 : 193.0) no description available & (reliability: 1102.0) & (original description: Putative TBL31, Description = Protein trichome birefringence-like 31, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf08149_7571-10982' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08156_86695-90458' ' (original description: Putative ppo, Description = Polyphenol oxidase, PFAM = PF12142;PF12143;PF00264)' T '35.2' 'not assigned.unknown' 'niben101scf08156_962241-968192' ' no hits & (original description: Putative MTR_1g010100, Description = Pre-mRNA-splicing factor cwc-21, putative, PFAM = PF08312)' T '35.2' 'not assigned.unknown' 'niben101scf08157_204695-210354' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08160_127358-134419' '(at5g42710 : 157.0) unknown protein; INVOLVED IN: biological_process unknown. & (reliability: 314.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08160_299469-305344' '(at1g75180 : 310.0) Erythronate-4-phosphate dehydrogenase family protein; BEST Arabidopsis thaliana protein match is: Erythronate-4-phosphate dehydrogenase family protein (TAIR:AT1G19400.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 620.0) & (original description: Putative BnaC06g22540D, Description = BnaC06g22540D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08160_571004-574053' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08167_73112-75561' ' no hits & (original description: Putative arg, Description = Putative arabinogalactan-protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08167_73238-82970' ' no hits & (original description: Putative arg, Description = Putative arabinogalactan-protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08167_116697-119098' ' no hits & (original description: Putative arg, Description = Putative arabinogalactan-protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08167_133150-135551' ' no hits & (original description: Putative arg, Description = Putative arabinogalactan-protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08167_207381-209863' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08168_78553-81033' ' no hits & (original description: Putative pit1, Description = Pit1 protein, PFAM = PF00304)' T '35.2' 'not assigned.unknown' 'niben101scf08176_74617-84742' '(at3g13060 : 389.0) evolutionarily conserved C-terminal region 5 (ECT5); CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 2 (TAIR:AT3G13460.4); Has 1288 Blast hits to 1234 proteins in 189 species: Archae - 0; Bacteria - 12; Metazoa - 605; Fungi - 140; Plants - 385; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink). & (gnl|cdd|37112 : 314.0) no description available & (gnl|cdd|67749 : 155.0) no description available & (reliability: 778.0) & (original description: Putative YTP13, Description = YTH domain-contained RNA binding protein 13, PFAM = PF04146)' T '35.2' 'not assigned.unknown' 'niben101scf08178_49124-56322' '(at1g62780 : 224.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 94 Blast hits to 94 proteins in 35 species: Archae - 6; Bacteria - 10; Metazoa - 21; Fungi - 2; Plants - 48; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 448.0) & (original description: Putative CGL27, Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08178_117006-119440' ' no hits & (original description: Putative corC, Description = 14 kDa proline-rich protein DC2.15, PFAM = PF14547)' T '35.2' 'not assigned.unknown' 'niben101scf08182_16998-19713' '(at5g56120 : 245.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12870.1); Has 77 Blast hits to 75 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 490.0) & (original description: Putative BnaA10g10270D, Description = BnaA10g10270D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08182_52493-93031' '(at3g13330 : 2447.0) Encodes a protein that interacts with the 26S proteasome. Mutants are phenotypically indistinguishable from wild type plants under a variety of growth conditions. Protein levels increase upon exposure of seedlings to MG132, a specific, potent, reversible, and cell-permeable proteasome inhibitor.; proteasome activating protein 200 (PA200); FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3437 (InterPro:IPR021843), Armadillo-type fold (InterPro:IPR016024); Has 512 Blast hits to 355 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi - 262; Plants - 57; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|37062 : 1081.0) no description available & (reliability: 4894.0) & (original description: Putative PA200, Description = Proteasome activator subunit 4, PFAM = PF11919;PF16507;PF16507)' T '35.2' 'not assigned.unknown' 'niben101scf08182_193493-196973' ' no hits & (original description: Putative PGSC0003DMG400022257, Description = Glycine-rich protein / oleosin, putative, PFAM = PF01277)' T '35.2' 'not assigned.unknown' 'niben101scf08186_109494-111983' ' no hits & (original description: Putative HLH1, Description = AtbHLH165, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08193_45444-63538' ' no hits & (original description: Putative MSB1, Description = Rhodopsin, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08195_587868-590269' '(gnl|cdd|68105 : 90.9) no description available & (at2g34340 : 80.1) Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT1G29640.1); Has 334 Blast hits to 334 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 334; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative , Description = , PFAM = PF04520)' T '35.2' 'not assigned.unknown' 'niben101scf08195_755823-759032' '(at5g45660 : 147.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative BnaAnng05700D, Description = BnaAnng05700D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08203_90145-95906' '(at3g56820 : 209.0) unknown protein; Has 34 Blast hits to 34 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 418.0) & (original description: Putative Sb03g037620, Description = Putative uncharacterized protein Sb03g037620, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08207_133175-149687' '(at1g21280 : 105.0) CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative , Description = , PFAM = PF03732;PF14244)' T '35.2' 'not assigned.unknown' 'niben101scf08231_20123-22662' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08242_133551-136061' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08250_194912-206783' '(at3g48480 : 186.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: UB-like protease 1D (TAIR:AT1G60220.1); Has 84 Blast hits to 84 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 30; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|34761 : 91.7) no description available & (reliability: 372.0) & (original description: Putative Os11g0214001, Description = Os11g0214001 protein, PFAM = PF02902)' T '35.2' 'not assigned.unknown' 'niben101scf08250_286722-290044' ' no hits & (original description: Putative , Description = , PFAM = PF13912;PF13912;PF13912)' T '35.2' 'not assigned.unknown' 'niben101scf08250_328336-330566' ' no hits & (original description: Putative At3g54085, Description = At3g54082, PFAM = PF08571)' T '35.2' 'not assigned.unknown' 'niben101scf08263_317261-328173' '(at5g22120 : 260.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 520.0) & (original description: Putative Ccrd_013657, Description = Nucleotide-binding, alpha-beta plait, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08268_31419-33649' ' no hits & (original description: Putative TCM_005887, Description = F-box/WD repeat-containing protein 4, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08272_47220-58091' ' no hits & (original description: Putative rpl38, Description = 60S ribosomal protein L38, PFAM = PF01781)' T '35.2' 'not assigned.unknown' 'niben101scf08273_98895-109807' '(at4g36210 : 622.0) Protein of unknown function (DUF726); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF726 (InterPro:IPR007941); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF726) (TAIR:AT2G18100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37596 : 566.0) no description available & (gnl|cdd|68835 : 266.0) no description available & (reliability: 1244.0) & (original description: Putative tmco4, Description = Transmembrane and coiled-coil domain-containing protein 4, PFAM = PF05277)' T '35.2' 'not assigned.unknown' 'niben101scf08273_99896-109819' '(at4g36210 : 563.0) Protein of unknown function (DUF726); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF726 (InterPro:IPR007941); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF726) (TAIR:AT2G18100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37596 : 535.0) no description available & (gnl|cdd|68835 : 264.0) no description available & (reliability: 1126.0) & (original description: Putative tmco4, Description = Transmembrane and coiled-coil domain-containing protein 4, PFAM = PF05277)' T '35.2' 'not assigned.unknown' 'niben101scf08274_203154-210575' '(at4g06536 : 167.0) SPla/RYanodine receptor (SPRY) domain-containing protein; CONTAINS InterPro DOMAIN/s: B302 (SPRY)-like (InterPro:IPR001870), SPla/RYanodine receptor SPRY (InterPro:IPR003877); Has 40 Blast hits to 40 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 7; Plants - 29; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 334.0) & (original description: Putative At4g06536, Description = At4g06536, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08277_2419-5133' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08280_199231-211558' '(at2g32760 : 237.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38107 : 100.0) no description available & (reliability: 474.0) & (original description: Putative At2g32755, Description = At2g32760, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08285_6133-16689' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08285_172280-174681' ' no hits & (original description: Putative glysoja_007451, Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08293_257500-259908' ' no hits & (original description: Putative , Description = , PFAM = PF02892)' T '35.2' 'not assigned.unknown' 'niben101scf08294_410728-415240' ' no hits & (original description: Putative Os02g0530850, Description = Putative ovule protein, PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben101scf08294_410815-415354' ' no hits & (original description: Putative PGSC0003DMG400005532, Description = Putative ovule protein, PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben101scf08294_413505-415290' ' no hits & (original description: Putative Os02g0530850, Description = Os02g0530850 protein, PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben101scf08294_545050-553544' '(at1g04985 : 172.0) unknown protein; Has 37 Blast hits to 37 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative At1g04985, Description = Putative uncharacterized protein At1g04985, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08294_545365-553779' '(at1g04985 : 100.0) unknown protein; Has 37 Blast hits to 37 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative At1g04985, Description = Ubiquinol oxidase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08298_455492-457869' ' no hits & (original description: Putative PGSC0003DMG400015809, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08300_51735-54409' ' no hits & (original description: Putative F383_26418, Description = Putative Xaa-Pro aminopeptidase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08308_428562-430906' ' no hits & (original description: Putative PGSC0003DMG400025075, Description = Nucleolar protein 16, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08308_481726-485642' '(at1g71760 : 157.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 84 Blast hits to 84 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative , Description = , PFAM = PF15749)' T '35.2' 'not assigned.unknown' 'niben101scf08309_51344-55915' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08321_303950-314980' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08321_314619-327664' '(at1g01430 : 462.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 25 (TBL25); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 26 (TAIR:AT4G01080.1); Has 1353 Blast hits to 1335 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 6; Plants - 1340; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|72785 : 154.0) no description available & (reliability: 924.0) & (original description: Putative TBL25, Description = Protein trichome birefringence-like 25, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf08326_6206-9294' ' no hits & (original description: Putative , Description = , PFAM = PF03478)' T '35.2' 'not assigned.unknown' 'niben101scf08326_47066-51293' '(at5g20090 : 175.0) Uncharacterised protein family (UPF0041); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0041 (InterPro:IPR005336); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0041) (TAIR:AT4G14695.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36803 : 144.0) no description available & (gnl|cdd|67278 : 122.0) no description available & (reliability: 350.0) & (original description: Putative MPC1, Description = Mitochondrial pyruvate carrier 1, PFAM = PF03650)' T '35.2' 'not assigned.unknown' 'niben101scf08326_169113-174454' '(at5g24310 : 189.0) One of four ABI-like proteins. Involved in trichome morphogenesis, root elongation. Associates with microtubules.; ABL interactor-like protein 3 (ABIL3); BEST Arabidopsis thaliana protein match is: ABL interactor-like protein 2 (TAIR:AT3G49290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5jkn2|abil2_orysa : 130.0) Putative protein ABIL2 (Abl interactor-like protein 2) - Oryza sativa (Rice) & (reliability: 378.0) & (original description: Putative ABIL2, Description = Protein ABIL2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08333_623660-634989' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08333_803215-809022' '(at3g10250 : 313.0) Plant protein 1589 of unknown function; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476); BEST Arabidopsis thaliana protein match is: Plant protein 1589 of unknown function (TAIR:AT5G04090.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|88257 : 97.6) no description available & (reliability: 626.0) & (original description: Putative F383_00486, Description = Histidine--tRNA ligase, PFAM = PF09713)' T '35.2' 'not assigned.unknown' 'niben101scf08334_189505-202561' '(at4g06676 : 395.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Etoposide-induced 2.4 (InterPro:IPR009890); Has 261 Blast hits to 259 proteins in 97 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 16; Plants - 81; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|70719 : 107.0) no description available & (gnl|cdd|39169 : 106.0) no description available & (reliability: 790.0) & (original description: Putative At4g06676, Description = Protein EI24 homolog, PFAM = PF07264)' T '35.2' 'not assigned.unknown' 'niben101scf08338_17191-19722' ' no hits & (original description: Putative , Description = , PFAM = PF06839)' T '35.2' 'not assigned.unknown' 'niben101scf08341_311266-317872' ' no hits & (original description: Putative , Description = PPPDE thiol peptidase family protein, putative isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08341_364759-367654' ' no hits & (original description: Putative , Description = , PFAM = PF12734)' T '35.2' 'not assigned.unknown' 'niben101scf08341_654342-656797' '(at5g19590 : 176.0) Protein of unknown function, DUF538; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT4G02360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86647 : 83.0) no description available & (reliability: 352.0) & (original description: Putative BnaC02g08860D, Description = BnaC02g08860D protein, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben101scf08341_689742-691912' ' no hits & (original description: Putative , Description = , PFAM = PF08137)' T '35.2' 'not assigned.unknown' 'niben101scf08341_954885-957724' ' no hits & (original description: Putative BnaC07g25750D, Description = BnaC07g25750D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08341_1161830-1175524' '(at5g19540 : 543.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1086.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08344_80081-91626' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08347_55102-58001' ' no hits & (original description: Putative PGSC0003DMG400021769, Description = , PFAM = PF00403)' T '35.2' 'not assigned.unknown' 'niben101scf08347_190308-192643' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08351_590052-595202' '(at1g47720 : 104.0) Encodes an organellar single-strand DNA binding protein, located in mitochondria, controls the stoichiometry of alternative mitochondrial DNA forms generated by homologous recombination.; Organellar Single-stranded (OSB1); FUNCTIONS IN: single-stranded DNA binding; INVOLVED IN: negative regulation of DNA recombination, mitochondrial genome maintenance; LOCATED IN: mitochondrion, apoplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Primosome PriB/single-strand DNA-binding (InterPro:IPR000424); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 9 (TAIR:AT4G20010.2); Has 198 Blast hits to 122 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 197; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|84774 : 84.9) no description available & (reliability: 208.0) & (original description: Putative PGSC0003DMG400019333, Description = Os03g0633900 protein, PFAM = PF00436)' T '35.2' 'not assigned.unknown' 'niben101scf08357_476655-479539' '(at5g39530 : 216.0) Protein of unknown function (DUF1997); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1997 (InterPro:IPR018971); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1997) (TAIR:AT5G39520.1); Has 204 Blast hits to 204 proteins in 68 species: Archae - 0; Bacteria - 103; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|87911 : 100.0) no description available & (reliability: 432.0) & (original description: Putative , Description = , PFAM = PF09366)' T '35.2' 'not assigned.unknown' 'niben101scf08368_358094-360321' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08376_43689-65265' '(at1g75180 : 305.0) Erythronate-4-phosphate dehydrogenase family protein; BEST Arabidopsis thaliana protein match is: Erythronate-4-phosphate dehydrogenase family protein (TAIR:AT1G19400.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 610.0) & (original description: Putative AN, Description = Erythronate-4-phosphate dehydrogenase family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08376_100319-103819' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08391_107506-109805' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08391_210449-307994' '(at5g24740 : 2391.0) EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (gnl|cdd|37020 : 164.0) no description available & (gnl|cdd|34648 : 164.0) no description available & (reliability: 4782.0) & (original description: Putative , Description = , PFAM = PF16908;PF06650;PF12624;PF16910;PF16909)' T '35.2' 'not assigned.unknown' 'niben101scf08391_228292-261272' '(at5g24740 : 691.0) EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (reliability: 1382.0) & (original description: Putative At5g24740, Description = VPS13-like protein, PFAM = PF16910;PF06650)' T '35.2' 'not assigned.unknown' 'niben101scf08410_168427-178555' '(at1g27290 : 112.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative PGSC0003DMG401021901, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08411_50656-54407' '(at5g41590 : 157.0) Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT2G38640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86676 : 131.0) no description available & (reliability: 314.0) & (original description: Putative At5g41590, Description = Protein LURP-one-related 17, PFAM = PF04525)' T '35.2' 'not assigned.unknown' 'niben101scf08415_142616-151438' '(at5g23850 : 632.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF821) (TAIR:AT3G48980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|69222 : 631.0) no description available & (gnl|cdd|37669 : 577.0) no description available & (reliability: 1264.0) & (original description: Putative duf821, Description = DUF821, PFAM = PF05686)' T '35.2' 'not assigned.unknown' 'niben101scf08419_272154-275119' ' (original description: Putative PGSC0003DMG400041062, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08430_99422-101654' ' no hits & (original description: Putative PGSC0003DMG400013918, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08445_246301-248636' ' no hits & (original description: Putative orf112c, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08445_260468-262680' ' no hits & (original description: Putative PGSC0003DMG400029000, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08446_61545-66907' '(at2g33793 : 148.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative BnaC04g44200D, Description = BnaC04g44200D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08446_327097-331928' '(at4g21700 : 538.0) Protein of unknown function (DUF2921); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2921 (InterPro:IPR021319); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF2921) (TAIR:AT1G52780.1); Has 127 Blast hits to 111 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 127; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1076.0) & (original description: Putative PGSC0003DMG400029723, Description = DUF2921 family protein, PFAM = PF11145)' T '35.2' 'not assigned.unknown' 'niben101scf08447_578988-581902' '(at3g07350 : 215.0) Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT3G25240.1); Has 393 Blast hits to 390 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 391; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68298 : 199.0) no description available & (reliability: 430.0) & (original description: Putative TCM_002725, Description = Sulfate/thiosulfate import ATP-binding protein cysA, putative, PFAM = PF04720)' T '35.2' 'not assigned.unknown' 'niben101scf08455_1075-32314' '(at5g24280 : 1121.0) GAMMA-IRRADIATION AND MITOMYCIN C INDUCED 1 (GMI1); BEST Arabidopsis thaliana protein match is: defective in meristem silencing 3 (TAIR:AT3G49250.1); Has 114 Blast hits to 102 proteins in 24 species: Archae - 0; Bacteria - 7; Metazoa - 8; Fungi - 4; Plants - 91; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 2242.0) & (original description: Putative Os01g0235200, Description = Os01g0235200 protein, PFAM = PF13589)' T '35.2' 'not assigned.unknown' 'niben101scf08455_9974-12975' ' no hits & (original description: Putative GMI1, Description = BnaA06g26750D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08465_201362-204726' ' no hits & (original description: Putative HMGa, Description = HMG-Y-related protein A, PFAM = PF02178;PF02178;PF02178;PF00538)' T '35.2' 'not assigned.unknown' 'niben101scf08465_418732-421466' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08466_75632-82239' '(gnl|cdd|72603 : 174.0) no description available & (at3g22680 : 154.0) Encodes RNA-DIRECTED DNA METHYLATION 1 (RDM1), forming a complex with DMS3 (AT3G49250) and DRD1 (AT2G16390). This complex is termed DDR. The DDR complex is required for polymerase V transcripts and RNA-directed DNA methylation.; RNA-DIRECTED DNA METHYLATION 1 (RDM1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1950 (InterPro:IPR015270); Has 26 Blast hits to 26 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative RDM1, Description = RNA-directed DNA methylation 1, PFAM = PF09187)' T '35.2' 'not assigned.unknown' 'niben101scf08467_360266-367168' '(at5g05840 : 532.0) Protein of unknown function (DUF620); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF620 (InterPro:IPR006873); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF620) (TAIR:AT3G55720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68363 : 411.0) no description available & (reliability: 1064.0) & (original description: Putative F1I16_130, Description = Putative uncharacterized protein F1I16_130, PFAM = PF04788)' T '35.2' 'not assigned.unknown' 'niben101scf08470_229745-233122' '(at3g22970 : 295.0) Protein of unknown function (DUF506) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT4G14620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68298 : 224.0) no description available & (reliability: 590.0) & (original description: Putative glysoja_028213, Description = Bifunctional DNA-directed RNA polymerase subunit beta-beta, PFAM = PF04720)' T '35.2' 'not assigned.unknown' 'niben101scf08470_558729-570446' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08470_673076-676444' '(at5g62950 : 148.0) RNA polymerase II, Rpb4, core protein; FUNCTIONS IN: DNA-directed RNA polymerase activity, catalytic activity, nucleotide binding; INVOLVED IN: cellular metabolic process, transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HRDC-like (InterPro:IPR010997), RNA polymerase II, Rpb4 (InterPro:IPR005574), RNA polymerase II, Rpb4, core (InterPro:IPR006590); BEST Arabidopsis thaliana protein match is: RNA polymerase II, Rpb4, core protein (TAIR:AT3G28956.1). & (gnl|cdd|87962 : 100.0) no description available & (gnl|cdd|39370 : 99.0) no description available & (reliability: 296.0) & (original description: Putative At5g62950, Description = At5g62950, PFAM = PF03874)' T '35.2' 'not assigned.unknown' 'niben101scf08478_38700-42450' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08478_82121-85443' ' no hits & (original description: Putative PGSC0003DMG400026424, Description = Reticulocyte-binding protein 2 isogeny a, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08478_157597-160034' ' (original description: Putative , Description = , PFAM = PF05938)' T '35.2' 'not assigned.unknown' 'niben101scf08478_455849-467896' '(at2g32760 : 219.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38107 : 105.0) no description available & (reliability: 438.0) & (original description: Putative At2g32755, Description = At2g32760, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08488_237432-242409' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08500_185232-188556' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08500_186781-203786' '(at3g12010 : 543.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell, cultured cell; CONTAINS InterPro DOMAIN/s: Colon cancer-associated Mic1-like (InterPro:IPR009755); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37588 : 387.0) no description available & (gnl|cdd|70497 : 164.0) no description available & (reliability: 1086.0) & (original description: Putative , Description = , PFAM = PF07035)' T '35.2' 'not assigned.unknown' 'niben101scf08504_12587-18977' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08504_378156-385954' ' no hits & (original description: Putative Sb03g011030, Description = Putative uncharacterized protein Sb03g011030, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08510_10830-16673' ' no hits & (original description: Putative PGSC0003DMG400001172, Description = Putative ovule protein, PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben101scf08510_121625-124185' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08510_147363-192065' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08514_58184-64584' '(at4g24380 : 221.0) CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37762 : 170.0) no description available & (reliability: 442.0) & (original description: Putative At5g65400, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF03959)' T '35.2' 'not assigned.unknown' 'niben101scf08516_35094-38585' ' no hits & (original description: Putative PGSC0003DMG400014129, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08516_275808-279625' '(at3g02645 : 452.0) Plant protein of unknown function (DUF247); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50150.1). & (gnl|cdd|66792 : 142.0) no description available & (reliability: 904.0) & (original description: Putative At3g02645, Description = Putative UPF0481 protein At3g02645, PFAM = PF03140)' T '35.2' 'not assigned.unknown' 'niben101scf08516_276189-282011' '(at3g02645 : 157.0) Plant protein of unknown function (DUF247); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50150.1). & (gnl|cdd|66792 : 94.9) no description available & (reliability: 314.0) & (original description: Putative At3g02645, Description = UPF0481 plant-like protein, PFAM = PF03140)' T '35.2' 'not assigned.unknown' 'niben101scf08516_381215-386903' '(at2g12400 : 477.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25270.1); Has 177 Blast hits to 172 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 954.0) & (original description: Putative Sb04g005690, Description = Putative uncharacterized protein Sb04g005690, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08516_470116-472548' '(at1g80520 : 140.0) Sterile alpha motif (SAM) domain-containing protein; CONTAINS InterPro DOMAIN/s: Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 2 (InterPro:IPR011510); BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G15760.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative , Description = , PFAM = PF07647)' T '35.2' 'not assigned.unknown' 'niben101scf08517_110365-115388' '(at5g56220 : 1246.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: apoptosis; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS class) (TAIR:AT4G23440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 2492.0) & (original description: Putative At5g56220, Description = P-loop containing nucleoside triphosphate hydrolases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08519_378641-382948' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08523_109856-113684' ' no hits & (original description: Putative Ave1, Description = Avirulence on Ve1, PFAM = PF03330)' T '35.2' 'not assigned.unknown' 'niben101scf08526_230086-236812' '(at1g71780 : 191.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 34 Blast hits to 34 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 382.0) & (original description: Putative BnaC06g32750D, Description = BnaC06g32750D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08531_420063-423674' '(at1g72170 : 105.0) Domain of unknown function (DUF543); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF543 (InterPro:IPR007512); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF543) (TAIR:AT1G22520.1); Has 92 Blast hits to 92 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 34; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative At1g72165/T9N14_2, Description = Putative uncharacterized protein At1g72165/T9N14_2, PFAM = PF04418)' T '35.2' 'not assigned.unknown' 'niben101scf08533_246806-250438' '(at4g25030 : 362.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G45410.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 724.0) & (original description: Putative At5g45410, Description = AT5G45410 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08533_268394-271311' '(at1g67660 : 340.0) Restriction endonuclease, type II-like superfamily protein; FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: YqaJ viral recombinase family (InterPro:IPR019080), Putative phage-type endonuclease (InterPro:IPR017482), Exonuclease, phage-type/RecB, C-terminal (InterPro:IPR011604), Restriction endonuclease, type II-like (InterPro:IPR011335); BEST Arabidopsis thaliana protein match is: Restriction endonuclease, type II-like superfamily protein (TAIR:AT1G13810.1). & (gnl|cdd|88132 : 118.0) no description available & (reliability: 680.0) & (original description: Putative At1g67660, Description = Restriction endonuclease, type II-like protein, PFAM = PF09588)' T '35.2' 'not assigned.unknown' 'niben101scf08546_115808-118604' ' no hits & (original description: Putative DEF3, Description = DEF3 protein, PFAM = PF00304)' T '35.2' 'not assigned.unknown' 'niben101scf08549_24253-29296' '(at5g05840 : 541.0) Protein of unknown function (DUF620); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF620 (InterPro:IPR006873); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF620) (TAIR:AT3G55720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68363 : 420.0) no description available & (reliability: 1082.0) & (original description: Putative At3g19540, Description = AT3g19540/T31J18_4, PFAM = PF04788)' T '35.2' 'not assigned.unknown' 'niben101scf08549_240989-244200' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08560_134682-137646' '(at1g70230 : 238.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 27 (TBL27); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 25 (TAIR:AT1G01430.1); Has 1336 Blast hits to 1321 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1329; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (gnl|cdd|72785 : 137.0) no description available & (reliability: 476.0) & (original description: Putative AXY4, Description = Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein, PFAM = PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf08564_476889-483446' '(at3g12930 : 232.0) Lojap-related protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Iojap-related protein (InterPro:IPR004394); Has 4153 Blast hits to 4153 proteins in 1667 species: Archae - 0; Bacteria - 3137; Metazoa - 32; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 916 (source: NCBI BLink). & (q41822|iojap_maize : 194.0) Protein Iojap - Zea mays (Maize) & (gnl|cdd|66128 : 106.0) no description available & (reliability: 464.0) & (original description: Putative IJ, Description = Protein Iojap, chloroplastic, PFAM = PF02410)' T '35.2' 'not assigned.unknown' 'niben101scf08566_204410-208360' '(at5g64230 : 253.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 506.0) & (original description: Putative MTR_2g008960, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08566_236442-239080' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08566_514479-519209' '(at5g64180 : 134.0) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative BnaA09g06740D, Description = BnaA09g06740D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08566_722746-735193' '(at1g36050 : 608.0) Endoplasmic reticulum vesicle transporter protein; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1692 (InterPro:IPR012936); BEST Arabidopsis thaliana protein match is: Endoplasmic reticulum vesicle transporter protein (TAIR:AT1G22200.1); Has 1261 Blast hits to 1092 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 439; Fungi - 275; Plants - 277; Viruses - 0; Other Eukaryotes - 270 (source: NCBI BLink). & (gnl|cdd|37878 : 427.0) no description available & (gnl|cdd|87414 : 257.0) no description available & (reliability: 1216.0) & (original description: Putative ergic3, Description = Endoplasmic reticulum-Golgi intermediate compartment protein 3, PFAM = PF13850;PF07970)' T '35.2' 'not assigned.unknown' 'niben101scf08574_33417-36476' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08575_105351-110984' ' no hits & (original description: Putative PGSC0003DMG400012178, Description = Putative ovule protein, PFAM = PF00847;PF00847)' T '35.2' 'not assigned.unknown' 'niben101scf08575_204974-207171' '(at5g10695 : 86.7) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages. & (reliability: 173.4) & (original description: Putative TCM_036826, Description = Methionyl-tRNA synthetase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08576_177622-181573' '(at5g51920 : 454.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22980.1); Has 991 Blast hits to 937 proteins in 281 species: Archae - 6; Bacteria - 292; Metazoa - 116; Fungi - 152; Plants - 275; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|37353 : 268.0) no description available & (reliability: 908.0) & (original description: Putative PGSC0003DMG400022751, Description = Molybdenum cofactor sulfurase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08578_7704-29555' '(at3g27325 : 1241.0) hydrolases, acting on ester bonds; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: intracellular protein transport, GPI anchor metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PGAP1-like (InterPro:IPR012908). & (gnl|cdd|38928 : 623.0) no description available & (gnl|cdd|87379 : 252.0) no description available & (reliability: 2482.0) & (original description: Putative BnaA06g32200D, Description = BnaA06g32200D protein, PFAM = PF07819)' T '35.2' 'not assigned.unknown' 'niben101scf08581_108812-113674' '(at5g57770 : 288.0) CONTAINS InterPro DOMAIN/s: Pleckstrin-like, plant (InterPro:IPR013666), Protein of unknown function DUF828 (InterPro:IPR008546); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region (TAIR:AT3G22810.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69238 : 98.3) no description available & (reliability: 576.0) & (original description: Putative Sb06g021500, Description = Putative uncharacterized protein Sb06g021500, PFAM = PF08458;PF05703)' T '35.2' 'not assigned.unknown' 'niben101scf08584_152304-161872' '(at2g26310 : 377.0) Chalcone-flavanone isomerase family protein; FUNCTIONS IN: intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT3G63170.1). & (reliability: 754.0) & (original description: Putative FAP2, Description = Fatty-acid-binding protein 2, PFAM = PF16035)' T '35.2' 'not assigned.unknown' 'niben101scf08586_619775-633327' '(at1g73650 : 359.0) FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors; INVOLVED IN: lipid metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104), Protein of unknown function DUF1295 (InterPro:IPR010721); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1295) (TAIR:AT1G18180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|70433 : 261.0) no description available & (gnl|cdd|39849 : 241.0) no description available & (reliability: 718.0) & (original description: Putative 14354, Description = Predicted protein, PFAM = PF06966)' T '35.2' 'not assigned.unknown' 'niben101scf08588_48764-55285' '(at1g69360 : 203.0) Plant protein of unknown function (DUF863); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF863, plant (InterPro:IPR008581); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G26620.1); Has 257 Blast hits to 226 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2; Plants - 245; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|69429 : 174.0) no description available & (reliability: 406.0) & (original description: Putative , Description = , PFAM = PF05904;PF05904)' T '35.2' 'not assigned.unknown' 'niben101scf08588_148717-151031' '(at3g11810 : 182.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G03330.1); Has 141 Blast hits to 141 proteins in 21 species: Archae - 0; Bacteria - 9; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 364.0) & (original description: Putative BnaA09g19250D, Description = BnaA09g19250D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08592_193515-199234' '(at5g04670 : 397.0) Enhancer of polycomb-like transcription factor protein; CONTAINS InterPro DOMAIN/s: Enhancer of polycomb-like (InterPro:IPR019542); BEST Arabidopsis thaliana protein match is: Enhancer of polycomb-like transcription factor protein (TAIR:AT4G32620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37472 : 80.1) no description available & (reliability: 794.0) & (original description: Putative BnaAnng01010D, Description = Enhancer of polycomb-like protein, PFAM = PF10513)' T '35.2' 'not assigned.unknown' 'niben101scf08601_50644-53033' ' no hits & (original description: Putative glysoja_019389, Description = Ty3/gypsy retrotransposon protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08609_26191-30489' '(at5g03560 : 250.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: nucleobase:cation symporter activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G38150.2); Has 33122 Blast hits to 10382 proteins in 236 species: Archae - 3; Bacteria - 11; Metazoa - 102; Fungi - 213; Plants - 32082; Viruses - 0; Other Eukaryotes - 711 (source: NCBI BLink). & (reliability: 500.0) & (original description: Putative MTR_1g085280, Description = Ribosomal protein L15, PFAM = PF13041;PF01535;PF01535)' T '35.2' 'not assigned.unknown' 'niben101scf08609_64257-69795' '(at3g50910 : 130.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66480.1); Has 76 Blast hits to 75 proteins in 28 species: Archae - 0; Bacteria - 10; Metazoa - 7; Fungi - 2; Plants - 49; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative PGSC0003DMG400018228, Description = Os02g0704600 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08609_143067-145772' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08621_52072-64301' '(at1g72020 : 97.8) unknown protein; Has 52 Blast hits to 52 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 195.6) & (original description: Putative SLL1, Description = SLL1 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08625_126640-133510' '(at1g50910 : 244.0) unknown protein; Has 1105 Blast hits to 802 proteins in 217 species: Archae - 2; Bacteria - 177; Metazoa - 445; Fungi - 210; Plants - 58; Viruses - 6; Other Eukaryotes - 207 (source: NCBI BLink). & (reliability: 488.0) & (original description: Putative TCM_030972, Description = Uncharacterized protein isoform 3, PFAM = PF14780)' T '35.2' 'not assigned.unknown' 'niben101scf08635_125290-148843' ' no hits & (original description: Putative At5g47455, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08636_20503-24161' '(at5g25170 : 253.0) PPPDE putative thiol peptidase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT2G25190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35545 : 233.0) no description available & (gnl|cdd|69428 : 175.0) no description available & (reliability: 506.0) & (original description: Putative desi2, Description = At5g25170, PFAM = PF05903)' T '35.2' 'not assigned.unknown' 'niben101scf08637_113762-117158' ' no hits & (original description: Putative PGSC0003DMG400030983, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08637_136068-138523' ' no hits & (original description: Putative PGSC0003DMG400030996, Description = , PFAM = PF04979)' T '35.2' 'not assigned.unknown' 'niben101scf08640_59478-65308' ' no hits & (original description: Putative PGSC0003DMG400004801, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08640_59487-65242' ' no hits & (original description: Putative PGSC0003DMG400004801, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08640_82565-90292' '(at5g47570 : 190.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 380.0) & (original description: Putative nduB8, Description = NADH dehydrogenase 1 beta subcomplex subunit 8, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08640_113401-116280' ' (original description: Putative hyp1, Description = 36.4 kDa proline-rich protein, PFAM = PF14547)' T '35.2' 'not assigned.unknown' 'niben101scf08643_47140-54876' '(at4g04190 : 270.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 540.0) & (original description: Putative LOC100191324, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08649_269918-273656' '(at1g76240 : 257.0) Arabidopsis protein of unknown function (DUF241); FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT2G17080.1); Has 409 Blast hits to 404 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 404; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|66742 : 120.0) no description available & (reliability: 514.0) & (original description: Putative , Description = , PFAM = PF03087)' T '35.2' 'not assigned.unknown' 'niben101scf08652_49402-61040' '(at5g41950 : 609.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: protein import into mitochondrial outer membrane; LOCATED IN: mitochondrial outer membrane translocase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Plant specific mitochondrial import receptor subunit TOM20 (InterPro:IPR010547); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1218.0) & (original description: Putative Os10g0518300, Description = Expressed protein, PFAM = PF06552)' T '35.2' 'not assigned.unknown' 'niben101scf08652_127148-129915' ' no hits & (original description: Putative BnaC01g15930D, Description = BnaC01g15930D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08653_455311-461548' '(at1g73750 : 455.0) Uncharacterised conserved protein UCP031088, alpha/beta hydrolase; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase, At1g15070 (InterPro:IPR016969), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase (TAIR:AT1G15060.1); Has 187 Blast hits to 154 proteins in 46 species: Archae - 0; Bacteria - 64; Metazoa - 8; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 910.0) & (original description: Putative PGSC0003DMG400005668, Description = Alpha/beta fold hydrolase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08653_738899-745522' '(at1g48580 : 133.0) unknown protein; Has 91 Blast hits to 91 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative , Description = , PFAM = PF15072)' T '35.2' 'not assigned.unknown' 'niben101scf08662_4356-7403' ' no hits & (original description: Putative PGSC0003DMG400014039, Description = Transposon-like protein, PFAM = PF13952)' T '35.2' 'not assigned.unknown' 'niben101scf08662_6317-11708' ' no hits & (original description: Putative PGSC0003DMG400008430, Description = Putative ovule protein, PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben101scf08665_9944-12900' ' no hits & (original description: Putative NAC2, Description = NAC transcription factor, PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'niben101scf08665_335305-338185' ' no hits & (original description: Putative PGSC0003DMG400000161, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08667_160356-165228' '(at1g40087 : 81.6) Plant transposase (Ptta/En/Spm family); CONTAINS InterPro DOMAIN/s: Transposase, Ptta/En/Spm, plant (InterPro:IPR004252); BEST Arabidopsis thaliana protein match is: Plant transposase (Ptta/En/Spm family) (TAIR:AT3G30200.1); Has 227 Blast hits to 225 proteins in 11 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 225; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 163.2) & (original description: Putative Sb03g019540, Description = Putative uncharacterized protein Sb03g019540, PFAM = PF13963;PF03004)' T '35.2' 'not assigned.unknown' 'niben101scf08672_393520-395047' ' no hits & (original description: Putative orf102a, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08675_67266-72779' '(at1g48580 : 159.0) unknown protein; Has 91 Blast hits to 91 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative , Description = , PFAM = PF15072)' T '35.2' 'not assigned.unknown' 'niben101scf08676_22142-29885' '(at2g40980 : 748.0) Protein kinase superfamily protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase-like domain (InterPro:IPR011009); Has 288 Blast hits to 258 proteins in 97 species: Archae - 0; Bacteria - 150; Metazoa - 0; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (reliability: 1496.0) & (original description: Putative MTR_7g087510, Description = Kinase family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08678_162097-172940' ' no hits & (original description: Putative PGSC0003DMG400004509, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08679_570142-576021' '(at1g55280 : 261.0) Lipase/lipooxygenase, PLAT/LH2 family protein; CONTAINS InterPro DOMAIN/s: Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976); Has 47 Blast hits to 47 proteins in 18 species: Archae - 0; Bacteria - 2; Metazoa - 4; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 522.0) & (original description: Putative BnaC03g70420D, Description = BnaC03g70420D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08683_14219-36094' ' no hits & (original description: Putative PGSC0003DMG400003969, Description = , PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'niben101scf08683_65880-70253' ' no hits & (original description: Putative PGSC0003DMG400009144, Description = Polyphosphoinositide phosphatase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08684_220725-223251' ' no hits & (original description: Putative PGSC0003DMG400014485, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08684_309108-315704' '(at4g32630 : 253.0) ArfGap/RecO-like zinc finger domain-containing protein; FUNCTIONS IN: ARF GTPase activator activity, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: NSP (nuclear shuttle protein)-interacting GTPase (TAIR:AT4G13350.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35921 : 129.0) no description available & (gnl|cdd|85433 : 91.5) no description available & (reliability: 506.0) & (original description: Putative ZIG4, Description = Putative ADP-ribosylation factor GTPase-activating protein AGD14, PFAM = PF01412)' T '35.2' 'not assigned.unknown' 'niben101scf08685_2741-5508' '(at3g12410 : 103.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G12460.1); Has 208 Blast hits to 196 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 197; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|39574 : 94.4) no description available & (reliability: 206.0) & (original description: Putative Sb03g030200, Description = Putative uncharacterized protein Sb03g030200, PFAM = PF01612)' T '35.2' 'not assigned.unknown' 'niben101scf08685_4412-18214' '(at5g47490 : 861.0) RGPR-related; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: RGPR-related (TAIR:AT5G47480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37124 : 363.0) no description available & (reliability: 1722.0) & (original description: Putative BnaA09g18310D, Description = BnaA09g18310D protein, PFAM = PF12931;PF12931;PF12932)' T '35.2' 'not assigned.unknown' 'niben101scf08685_4531-8136' '(at5g47490 : 150.0) RGPR-related; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: RGPR-related (TAIR:AT5G47480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 300.0) & (original description: Putative MAG5, Description = Protein transport protein Sec16B, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08685_80026-90117' '(at4g17420 : 402.0) Tryptophan RNA-binding attenuator protein-like; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF124 (InterPro:IPR002838), Tryptophan RNA-binding attenuator protein-like (InterPro:IPR016031); BEST Arabidopsis thaliana protein match is: Tryptophan RNA-binding attenuator protein-like (TAIR:AT5G47420.1); Has 844 Blast hits to 844 proteins in 391 species: Archae - 83; Bacteria - 631; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (gnl|cdd|85816 : 170.0) no description available & (reliability: 804.0) & (original description: Putative At5g47420, Description = Putative uncharacterized protein At5g47420, PFAM = PF01987)' T '35.2' 'not assigned.unknown' 'niben101scf08690_13738-20268' '(gnl|cdd|70732 : 114.0) no description available & (at2g45360 : 98.2) Protein of unknown function (DUF1442); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1442 (InterPro:IPR009902); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1442) (TAIR:AT3G60780.1); Has 113 Blast hits to 112 proteins in 16 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 196.4) & (original description: Putative , Description = , PFAM = PF07279)' T '35.2' 'not assigned.unknown' 'niben101scf08690_241316-246928' '(at3g61770 : 301.0) Acid phosphatase/vanadium-dependent haloperoxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: Acid phosphatase/vanadium-dependent haloperoxidase-related protein (TAIR:AT1G67600.1); Has 1098 Blast hits to 1098 proteins in 404 species: Archae - 0; Bacteria - 724; Metazoa - 0; Fungi - 0; Plants - 221; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink). & (gnl|cdd|32146 : 155.0) no description available & (reliability: 602.0) & (original description: Putative At3g61770, Description = Acid phosphatase/vanadium-dependent haloperoxidase-related protein, PFAM = PF02681)' T '35.2' 'not assigned.unknown' 'niben101scf08690_265191-272808' '(at3g61780 : 712.0) embryo defective 1703 (emb1703); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28400.1); Has 1076 Blast hits to 906 proteins in 181 species: Archae - 8; Bacteria - 72; Metazoa - 301; Fungi - 122; Plants - 81; Viruses - 2; Other Eukaryotes - 490 (source: NCBI BLink). & (reliability: 1424.0) & (original description: Putative At5g28320, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08690_306856-312926' '(at3g61800 : 556.0) CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2043 (InterPro:IPR018610), ENTH/VHS (InterPro:IPR008942); Has 308 Blast hits to 279 proteins in 95 species: Archae - 2; Bacteria - 30; Metazoa - 120; Fungi - 19; Plants - 44; Viruses - 2; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|37585 : 377.0) no description available & (reliability: 1112.0) & (original description: Putative At3g61800, Description = UV-stimulated scaffold protein A homolog, PFAM = PF09740)' T '35.2' 'not assigned.unknown' 'niben101scf08692_2675-5211' ' no hits & (original description: Putative PGSC0003DMG400030606, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08693_35116-37697' '(at1g52140 : 127.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative , Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben101scf08693_55894-58478' '(at1g52140 : 88.2) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 176.4) & (original description: Putative , Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben101scf08693_75629-78198' '(at1g79770 : 142.0) Protein of unknown function (DUF1677); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1677, plant (InterPro:IPR012876); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1677) (TAIR:AT5G25840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71349 : 131.0) no description available & (reliability: 284.0) & (original description: Putative BnaC06g18890D, Description = CASP-like protein, PFAM = PF07911)' T '35.2' 'not assigned.unknown' 'niben101scf08698_187158-190709' '(at2g34530 : 139.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative At2g34530, Description = BnaA04g20230D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08699_110216-112671' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08704_128544-131292' '(at5g22580 : 135.0) Stress responsive A/B Barrel Domain; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Stress responsive alpha-beta barrel (InterPro:IPR013097), Dimeric alpha-beta barrel (InterPro:IPR011008); BEST Arabidopsis thaliana protein match is: heat stable protein 1 (TAIR:AT3G17210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative MTR_2g084985, Description = Stress responsive A/B barrel domain protein, PFAM = PF07876)' T '35.2' 'not assigned.unknown' 'niben101scf08704_144063-146964' ' no hits & (original description: Putative PGSC0003DMG400026538, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08718_4177-6565' '(at4g39235 : 94.4) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative TCM_001694, Description = Dipeptide transport ATP-binding protein dppF, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08721_117877-123080' '(at3g04950 : 263.0) CONTAINS InterPro DOMAIN/s: SEC-C motif (InterPro:IPR004027); Has 583 Blast hits to 583 proteins in 248 species: Archae - 0; Bacteria - 488; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 526.0) & (original description: Putative , Description = Predicted protein, PFAM = PF02810)' T '35.2' 'not assigned.unknown' 'niben101scf08729_112302-116685' ' no hits & (original description: Putative BnaA06g27820D, Description = BnaA06g27820D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08729_187212-193726' '(at2g25730 : 222.0) unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages. & (gnl|cdd|37022 : 181.0) no description available & (reliability: 444.0) & (original description: Putative , Description = Zinc finger FYVE domain-containing protein 26 isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08729_226078-232693' '(at2g25730 : 587.0) unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages. & (reliability: 1174.0) & (original description: Putative , Description = Zinc finger FYVE domain-containing protein 26 isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08729_345084-353463' '(at4g32680 : 82.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52343.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 164.0) & (original description: Putative PGSC0003DMG400014491, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08742_144328-148331' '(gnl|cdd|69095 : 199.0) no description available & (at1g61260 : 132.0) Protein of unknown function (DUF761); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF761) (TAIR:AT1G11220.1); Has 110 Blast hits to 108 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 108; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative CFE1, Description = Cotton fiber expressed protein 1, PFAM = PF05553;PF14364)' T '35.2' 'not assigned.unknown' 'niben101scf08744_158660-161909' '(at5g13250 : 112.0) RING finger protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: RING finger protein (TAIR:AT1G28080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative Os12g0479100, Description = Os12g0479100 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08753_40766-50879' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08755_239550-246275' '(at3g47630 : 454.0) CONTAINS InterPro DOMAIN/s: Mitochondrial matrix Mmp37 (InterPro:IPR015222); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|87814 : 318.0) no description available & (gnl|cdd|38197 : 306.0) no description available & (reliability: 908.0) & (original description: Putative tamm41, Description = Mitochondrial translocator assembly and maintenance protein 41-like protein, PFAM = PF09139)' T '35.2' 'not assigned.unknown' 'niben101scf08755_409909-412646' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08757_103738-109136' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08758_18423-20869' '(at1g06980 : 142.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 159 Blast hits to 159 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative BnaC04g41030D, Description = BnaC04g41030D protein, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf08762_2956-5453' ' no hits & (original description: Putative PGSC0003DMG400029164, Description = Hydroxyproline-rich glycoprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08762_44152-51606' '(at5g09310 : 156.0) CONTAINS InterPro DOMAIN/s: Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit (InterPro:IPR019379); Has 168 Blast hits to 168 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|38612 : 106.0) no description available & (reliability: 312.0) & (original description: Putative BnaC03g03770D, Description = BnaC03g03770D protein, PFAM = PF10251)' T '35.2' 'not assigned.unknown' 'niben101scf08772_492421-494906' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08776_75916-80204' '(at5g11550 : 162.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 26 (TAIR:AT1G49780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08776_228100-235696' ' no hits & (original description: Putative PGSC0003DMG401018585, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08782_248981-255379' '(at4g13030 : 132.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative PGSC0003DMG402023433, Description = Lipid A export ATP-binding/permease MsbA, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08782_256987-260230' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08782_389568-392324' ' no hits & (original description: Putative , Description = Transposon protein, putative, CACTA, En/Spm sub-class, PFAM = PF13960)' T '35.2' 'not assigned.unknown' 'niben101scf08783_17823-30034' '(at3g26090 : 615.0) Encodes AtRGS1, a putative membrane receptor for D-glucose. Also functions as a regulator of G-protein signaling. Has GTPase-accelerating activity. Regulates the activity of AtGPA1. Lines over-expressing the gene are more tolerant to dehydration and root elongation. These phenotypes are dependent on ABA. Nuclear localization of the protein is dependent on ABA.; REGULATOR OF G-PROTEIN SIGNALING 1 (RGS1); FUNCTIONS IN: G-protein coupled receptor activity, GTPase activator activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of G protein signalling superfamily (InterPro:IPR016137), Regulator of G protein signalling (InterPro:IPR000342); Has 59 Blast hits to 59 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|84901 : 87.6) no description available & (reliability: 1230.0) & (original description: Putative RGS1, Description = Regulator of G-protein signaling 1, PFAM = PF00615)' T '35.2' 'not assigned.unknown' 'niben101scf08785_112110-114463' ' no hits & (original description: Putative , Description = , PFAM = PF04520)' T '35.2' 'not assigned.unknown' 'niben101scf08785_375932-378042' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08791_416626-420044' ' no hits & (original description: Putative BAC1, Description = Mitochondrial carrier protein, expressed, PFAM = PF00153)' T '35.2' 'not assigned.unknown' 'niben101scf08799_29982-34745' ' no hits & (original description: Putative , Description = RPM1 interacting protein 4, putative, PFAM = PF05627)' T '35.2' 'not assigned.unknown' 'niben101scf08804_38400-41347' '(at5g23700 : 84.3) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48860.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative RRP1, Description = Ripening-regulated protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08804_288162-290741' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08805_164775-170212' '(at1g18060 : 286.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 74 Blast hits to 74 proteins in 29 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 572.0) & (original description: Putative At1g18060, Description = AT1g18060/T10F20.23, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08812_18359-21960' '(at1g19330 : 170.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75060.1). & (reliability: 340.0) & (original description: Putative Bathy10g03180, Description = , PFAM = PF13867)' T '35.2' 'not assigned.unknown' 'niben101scf08814_48841-50069' ' no hits & (original description: Putative CPuORF2, Description = Conserved peptide upstream open reading frame 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08817_118795-122687' '(at2g46000 : 179.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mesoderm development candidate 2 (InterPro:IPR019330); Has 31 Blast hits to 31 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 358.0) & (original description: Putative BnaC04g04700D, Description = BnaC04g04700D protein, PFAM = PF10185)' T '35.2' 'not assigned.unknown' 'niben101scf08817_122688-129133' '(at2g45990 : 443.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 886.0) & (original description: Putative CPLD7, Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08817_189656-195015' '(at2g45980 : 166.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G00355.2); Has 93 Blast hits to 90 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 332.0) & (original description: Putative PGSC0003DMG400006504, Description = BnaA05g05280D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08819_22851-32180' '(at1g32810 : 250.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT4G10600.1); Has 8965 Blast hits to 5782 proteins in 447 species: Archae - 8; Bacteria - 670; Metazoa - 4118; Fungi - 1126; Plants - 398; Viruses - 78; Other Eukaryotes - 2567 (source: NCBI BLink). & (reliability: 500.0) & (original description: Putative T4F9.60, Description = Putative uncharacterized protein AT4g10600, PFAM = PF00628)' T '35.2' 'not assigned.unknown' 'niben101scf08819_129212-133419' '(at3g19970 : 475.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF829, transmembrane 53 (InterPro:IPR008547); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G18245.1); Has 401 Blast hits to 400 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 180; Fungi - 77; Plants - 116; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (gnl|cdd|69240 : 234.0) no description available & (gnl|cdd|37732 : 147.0) no description available & (reliability: 950.0) & (original description: Putative glysoja_030170, Description = Transmembrane protein 53, PFAM = PF05705)' T '35.2' 'not assigned.unknown' 'niben101scf08825_1-944' ' no hits & (original description: Putative , Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08833_135167-137532' ' no hits & (original description: Putative orf122, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08833_419378-422529' '(gnl|cdd|69171 : 485.0) no description available & (at1g18740 : 443.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT1G74450.1); Has 167 Blast hits to 164 proteins in 20 species: Archae - 3; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 886.0) & (original description: Putative BnaC05g50160D, Description = BnaC05g50160D protein, PFAM = PF05633)' T '35.2' 'not assigned.unknown' 'niben101scf08834_118405-122278' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08843_156705-161193' '(at2g23090 : 96.7) Uncharacterised protein family SERF; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family SERF (InterPro:IPR007513); Has 164 Blast hits to 164 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 42; Plants - 89; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 193.4) & (original description: Putative , Description = Leucine-rich repeat family protein, PFAM = PF04419;PF12907)' T '35.2' 'not assigned.unknown' 'niben101scf08844_40369-45494' '(at3g52110 : 211.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages. & (reliability: 422.0) & (original description: Putative F383_31672, Description = Polyribonucleotide nucleotidyltransferase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08855_13976-16524' '(at5g42655 : 136.0) Disease resistance-responsive (dirigent-like protein) family protein; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative PGSC0003DMG400029513, Description = Plant disease resistance response protein, PFAM = PF03018)' T '35.2' 'not assigned.unknown' 'niben101scf08855_281345-283647' ' no hits & (original description: Putative , Description = , PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf08863_227878-233303' '(at5g39410 : 596.0) Saccharopine dehydrogenase ; LOCATED IN: mitochondrion, plasma membrane, vacuole, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Saccharopine dehydrogenase / Homospermidine synthase (InterPro:IPR005097); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37944 : 476.0) no description available & (gnl|cdd|33079 : 176.0) no description available & (reliability: 1192.0) & (original description: Putative At5g39410, Description = Putative mitochondrial saccharopine dehydrogenase-like oxidoreductase, PFAM = PF03435)' T '35.2' 'not assigned.unknown' 'niben101scf08863_240172-255734' '(at5g39410 : 640.0) Saccharopine dehydrogenase ; LOCATED IN: mitochondrion, plasma membrane, vacuole, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Saccharopine dehydrogenase / Homospermidine synthase (InterPro:IPR005097); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37944 : 480.0) no description available & (gnl|cdd|33079 : 163.0) no description available & (reliability: 1280.0) & (original description: Putative At5g39410, Description = Probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410, PFAM = PF03435)' T '35.2' 'not assigned.unknown' 'niben101scf08863_282113-287547' '(gnl|cdd|69429 : 152.0) no description available & (at1g69360 : 137.0) Plant protein of unknown function (DUF863); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF863, plant (InterPro:IPR008581); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G26620.1); Has 257 Blast hits to 226 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2; Plants - 245; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative , Description = , PFAM = PF05904)' T '35.2' 'not assigned.unknown' 'niben101scf08871_27374-41809' ' no hits & (original description: Putative , Description = , PFAM = PF05340)' T '35.2' 'not assigned.unknown' 'niben101scf08874_41923-52471' '(at3g17900 : 692.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 45 Blast hits to 44 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 39; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 1384.0) & (original description: Putative BnaC06g07210D, Description = BnaC06g07210D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08874_128070-137344' '(at1g07040 : 429.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27030.1); Has 540 Blast hits to 538 proteins in 187 species: Archae - 0; Bacteria - 333; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 140 (source: NCBI BLink). & (reliability: 858.0) & (original description: Putative , Description = , PFAM = PF07063)' T '35.2' 'not assigned.unknown' 'niben101scf08884_118223-121856' '(at1g70900 : 362.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23110.4); Has 57 Blast hits to 57 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 724.0) & (original description: Putative BnaC06g32050D, Description = BnaC06g32050D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08895_90057-94082' ' no hits & (original description: Putative Agp4, Description = Arabinogalactan protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08895_189424-192298' ' no hits & (original description: Putative PGSC0003DMG400024977, Description = , PFAM = PF13920)' T '35.2' 'not assigned.unknown' 'niben101scf08899_64909-70778' '(at3g07210 : 522.0) unknown protein; Has 97 Blast hits to 85 proteins in 31 species: Archae - 0; Bacteria - 14; Metazoa - 7; Fungi - 19; Plants - 37; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 1044.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08899_126407-138356' '(at5g48720 : 189.0) Encodes XRI1 (X-ray induced 1). Required for post-meiotic stages of pollen development and male and female meiosis. Maybe required for meiotic DNA repair. Inducible by X-ray. Homozygous xri1 mutants are sterile due to extensive chromosome fragmentation.; X-RAY INDUCED TRANSCRIPT 1 (XRI1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: DNA repair, female meiosis, response to X-ray, pollen development, male meiosis; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01990.1); Has 123 Blast hits to 123 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 378.0) & (original description: Putative XRI1, Description = Protein XRI1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08918_872-3851' '(at1g56423 : 199.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 398.0) & (original description: Putative At1g56423, Description = Putative uncharacterized protein Sb01g037490, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08918_194046-198431' '(at5g03990 : 100.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08918_674125-687054' ' no hits & (original description: Putative , Description = , PFAM = PF02721)' T '35.2' 'not assigned.unknown' 'niben101scf08921_55970-63397' '(at3g28670 : 410.0) oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); Has 151 Blast hits to 150 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 820.0) & (original description: Putative At3g28670, Description = AT3g28670/MZN14_13, PFAM = PF14778)' T '35.2' 'not assigned.unknown' 'niben101scf08921_334535-351370' '(at2g34090 : 629.0) maternal effect embryo arrest 18 (MEE18); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen tube development, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 (InterPro:IPR002882). & (gnl|cdd|85779 : 179.0) no description available & (reliability: 1258.0) & (original description: Putative MEE18, Description = Maternal effect embryo arrest 18 protein, PFAM = PF01933)' T '35.2' 'not assigned.unknown' 'niben101scf08926_521276-524229' '(gnl|cdd|70178 : 233.0) no description available & (at3g08600 : 226.0) Protein of unknown function (DUF1191); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1191 (InterPro:IPR010605); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1191) (TAIR:AT4G22900.1); Has 124 Blast hits to 124 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 452.0) & (original description: Putative 4B, Description = Putative uncharacterized protein 4B, PFAM = PF06697)' T '35.2' 'not assigned.unknown' 'niben101scf08926_704319-706630' '(at3g08610 : 109.0) unknown protein; Has 40 Blast hits to 40 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative At3g08610, Description = NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, PFAM = PF15879)' T '35.2' 'not assigned.unknown' 'niben101scf08936_484013-488515' '(at1g32583 : 162.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: tapetum determinant 1 (TAIR:AT4G24972.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative MIL2, Description = Protein TAPETUM DETERMINANT 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08936_512775-541243' ' (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf08936_831668-844393' '(at3g07530 : 617.0) CONTAINS InterPro DOMAIN/s: Beta-Casp domain (InterPro:IPR022712); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73 kDa subunit-II (TAIR:AT2G01730.1); Has 624 Blast hits to 615 proteins in 160 species: Archae - 54; Bacteria - 6; Metazoa - 333; Fungi - 44; Plants - 93; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (gnl|cdd|36353 : 387.0) no description available & (reliability: 1234.0) & (original description: Putative BnaA05g30100D, Description = BnaA05g30100D protein, PFAM = PF10996;PF16661)' T '35.2' 'not assigned.unknown' 'niben101scf08936_1001074-1003295' '(at4g09550 : 86.3) AtGCP3 interacting protein 1 (GIP1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3743 (InterPro:IPR022214); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3743) (TAIR:AT1G73790.1); Has 222 Blast hits to 222 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 54; Fungi - 64; Plants - 72; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative GIP1, Description = Mitotic-spindle organizing 1B-like protein, PFAM = PF12554)' T '35.2' 'not assigned.unknown' 'niben101scf08937_92156-103333' '(at3g15550 : 551.0) unknown protein; Has 25732 Blast hits to 16979 proteins in 961 species: Archae - 144; Bacteria - 1801; Metazoa - 12681; Fungi - 1868; Plants - 912; Viruses - 94; Other Eukaryotes - 8232 (source: NCBI BLink). & (reliability: 1102.0) & (original description: Putative BnaC01g35980D, Description = BnaC01g35980D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08942_92208-94713' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf08947_142082-145562' ' no hits & (original description: Putative At5g57510, Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben101scf08960_21092-28588' '(at1g64600 : 624.0) methyltransferases;copper ion binding; FUNCTIONS IN: methyltransferase activity, copper ion binding; INVOLVED IN: translation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein Rsm22, bacterial-type (InterPro:IPR015324), Cytochrome c oxidase assembly protein CtaG/Cox11 (InterPro:IPR007533); Has 735 Blast hits to 687 proteins in 272 species: Archae - 0; Bacteria - 212; Metazoa - 195; Fungi - 160; Plants - 44; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (gnl|cdd|37750 : 217.0) no description available & (gnl|cdd|72659 : 172.0) no description available & (reliability: 1248.0) & (original description: Putative Sb01g031290, Description = Putative uncharacterized protein Sb01g031290, PFAM = PF09243;PF09243)' T '35.2' 'not assigned.unknown' 'niben101scf08963_214761-226341' ' (original description: Putative HNRL1, Description = Heterogeneous nuclear ribonucleoprotein U-like protein 1, PFAM = PF13671;PF00622)' T '35.2' 'not assigned.unknown' 'niben101scf08963_335884-338840' ' no hits & (original description: Putative PGSC0003DMG400022406, Description = At4g21500, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08966_53771-60231' '(at2g45320 : 502.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; Has 45 Blast hits to 45 proteins in 16 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1004.0) & (original description: Putative BnaC03g25280D, Description = BnaC03g25280D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf08975_174704-178588' ' no hits & (original description: Putative HMGB1, Description = High mobility group B protein 1, PFAM = PF00505)' T '35.2' 'not assigned.unknown' 'niben101scf08975_204192-211950' '(at5g01510 : 380.0) ROOT UV-B SENSITIVE 5 (RUS5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT3G45890.1); Has 426 Blast hits to 424 proteins in 125 species: Archae - 0; Bacteria - 2; Metazoa - 111; Fungi - 69; Plants - 183; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|68458 : 321.0) no description available & (gnl|cdd|39450 : 295.0) no description available & (reliability: 760.0) & (original description: Putative MTR_7g068310, Description = UPF0420 C16orf58-like protein, PFAM = PF04884)' T '35.2' 'not assigned.unknown' 'niben101scf08977_12934-15676' ' no hits & (original description: Putative , Description = , PFAM = PF10950)' T '35.2' 'not assigned.unknown' 'niben101scf09004_47907-53459' ' (original description: Putative CRF1, Description = Ethylene-responsive transcription factor CRF4, PFAM = PF00847;PF00847)' T '35.2' 'not assigned.unknown' 'niben101scf09005_115118-117985' ' (original description: Putative , Description = Non-specific lipid-transfer protein C, cotyledon-specific isoform, PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'niben101scf09014_138268-140867' '(at2g27770 : 196.0) Plant protein of unknown function (DUF868); LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT3G04860.1); Has 288 Blast hits to 288 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 288; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69434 : 183.0) no description available & (reliability: 392.0) & (original description: Putative , Description = , PFAM = PF05910)' T '35.2' 'not assigned.unknown' 'niben101scf09017_14094-23817' '(at2g30105 : 418.0) CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G07910.1). & (gnl|cdd|35693 : 105.0) no description available & (gnl|cdd|29214 : 87.2) no description available & (reliability: 836.0) & (original description: Putative At2g30105, Description = LRR repeats and ubiquitin-like domain-containing protein At2g30105, PFAM = PF00240;PF13855;PF13855)' T '35.2' 'not assigned.unknown' 'niben101scf09025_87403-90401' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09025_211028-220677' '(at5g63440 : 409.0) Protein of unknown function (DUF167); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF167 (InterPro:IPR003746); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF167) (TAIR:AT1G49170.1); Has 732 Blast hits to 732 proteins in 300 species: Archae - 13; Bacteria - 428; Metazoa - 192; Fungi - 6; Plants - 66; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|38486 : 143.0) no description available & (reliability: 818.0) & (original description: Putative At5g63440, Description = UPF0235 protein At5g63440, PFAM = PF02594)' T '35.2' 'not assigned.unknown' 'niben101scf09030_121290-497046' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09030_411047-500077' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf09040_107635-115518' '(at5g46560 : 147.0) CONTAINS InterPro DOMAIN/s: Inner nuclear membrane protein MAN1 (InterPro:IPR018996); Has 58 Blast hits to 58 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 11; Fungi - 15; Plants - 20; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative PGSC0003DMG400024215, Description = Man1-Src1p-carboxy-terminal domain protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09044_52676-55077' '(at2g07772 : 91.3) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative orf134b, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09044_132188-142252' ' (original description: Putative TIMPB, Description = Proteinase inhibitor I-A, PFAM = PF00280)' T '35.2' 'not assigned.unknown' 'niben101scf09044_206453-225530' ' no hits & (original description: Putative PGSC0003DMG400003059, Description = Putative ovule protein, PFAM = PF01429;PF01429;PF01429;PF01429)' T '35.2' 'not assigned.unknown' 'niben101scf09052_221232-228398' ' no hits & (original description: Putative ZFP1, Description = Membrane associated ring finger 1,8, putative, PFAM = PF12428)' T '35.2' 'not assigned.unknown' 'niben101scf09068_313365-337433' '(at3g56720 : 84.7) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages. & (reliability: 169.4) & (original description: Putative At3g56720, Description = AT3G56720 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09071_105067-107710' ' no hits & (original description: Putative PGSC0003DMG400008578, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09071_191835-194245' ' no hits & (original description: Putative , Description = , PFAM = PF13966)' T '35.2' 'not assigned.unknown' 'niben101scf09079_55893-59470' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09079_225038-227439' ' no hits & (original description: Putative PGSC0003DMG400007815, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09082_111180-120021' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09082_147317-149802' ' no hits & (original description: Putative OFP9, Description = AtOFP9, PFAM = PF04844)' T '35.2' 'not assigned.unknown' 'niben101scf09082_157842-161808' ' no hits & (original description: Putative F383_08918, Description = Autolysin, PFAM = PF01476)' T '35.2' 'not assigned.unknown' 'niben101scf09087_197255-204727' '(at4g08330 : 118.0) unknown protein. & (reliability: 236.0) & (original description: Putative At4g08330, Description = Uncharacterized protein At4g08330, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09089_118371-123120' ' no hits & (original description: Putative , Description = , PFAM = PF04520)' T '35.2' 'not assigned.unknown' 'niben101scf09089_174382-178902' '(at2g36145 : 184.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 368.0) & (original description: Putative PHYPADRAFT_48298, Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09092_318593-322447' '(at4g09620 : 194.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); Has 234 Blast hits to 198 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 388.0) & (original description: Putative At4g09620, Description = Mitochondrial transcription termination factor family protein, PFAM = PF02536)' T '35.2' 'not assigned.unknown' 'niben101scf09099_6561-13859' '(at1g34320 : 517.0) Protein of unknown function (DUF668); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700), Protein of unknown function DUF3475 (InterPro:IPR021864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT5G08660.1); Has 339 Blast hits to 273 proteins in 21 species: Archae - 0; Bacteria - 1; Metazoa - 3; Fungi - 0; Plants - 335; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68572 : 116.0) no description available & (reliability: 1034.0) & (original description: Putative TCM_036679, Description = Uncharacterized protein isoform 1, PFAM = PF05003;PF11961)' T '35.2' 'not assigned.unknown' 'niben101scf09100_488770-491375' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09101_123359-132271' '(at1g07060 : 100.0) unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative PGSC0003DMG400030457, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09101_390334-395146' '(at5g01750 : 87.8) Protein of unknown function (DUF567); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT3G11740.1); Has 468 Blast hits to 466 proteins in 44 species: Archae - 0; Bacteria - 29; Metazoa - 0; Fungi - 27; Plants - 412; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 175.6) & (original description: Putative , Description = , PFAM = PF04525)' T '35.2' 'not assigned.unknown' 'niben101scf09101_463430-469744' '(at2g30280 : 154.0) Encodes RDM4, a transcriptional regulator functioning in RNA-directed DNA methylation and plant development.; RNA-directed DNA methylation 4 (RDM4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1762 (InterPro:IPR013883); Has 44351 Blast hits to 18281 proteins in 1030 species: Archae - 135; Bacteria - 13377; Metazoa - 12547; Fungi - 4712; Plants - 1881; Viruses - 609; Other Eukaryotes - 11090 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative RDM4, Description = RNA-directed DNA methylation 4, PFAM = PF08574)' T '35.2' 'not assigned.unknown' 'niben101scf09107_20256-25005' ' no hits & (original description: Putative PGSC0003DMG400028325, Description = , PFAM = PF03763)' T '35.2' 'not assigned.unknown' 'niben101scf09107_21059-24236' ' no hits & (original description: Putative PGSC0003DMG400028325, Description = , PFAM = PF03763)' T '35.2' 'not assigned.unknown' 'niben101scf09108_36131-38631' '(at1g02816 : 166.0) Protein of unknown function, DUF538; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT4G02370.1); Has 559 Blast hits to 558 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 558; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|86647 : 133.0) no description available & (reliability: 332.0) & (original description: Putative BnaC08g45960D, Description = BnaC08g45960D protein, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben101scf09112_243063-246262' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF08268;PF00646)' T '35.2' 'not assigned.unknown' 'niben101scf09112_345619-350076' '(at5g65340 : 213.0) Protein of unknown function, DUF617; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF617, plant (InterPro:IPR006460); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF617 (TAIR:AT2G22460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68336 : 205.0) no description available & (reliability: 426.0) & (original description: Putative MIZ1, Description = Protein MIZU-KUSSEI 1, PFAM = PF04759)' T '35.2' 'not assigned.unknown' 'niben101scf09115_47944-53384' '(at4g24760 : 395.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G14390.1); Has 3811 Blast hits to 3801 proteins in 821 species: Archae - 8; Bacteria - 1310; Metazoa - 620; Fungi - 194; Plants - 289; Viruses - 6; Other Eukaryotes - 1384 (source: NCBI BLink). & (gnl|cdd|36765 : 337.0) no description available & (reliability: 790.0) & (original description: Putative abhd17c, Description = Protein ABHD17C, PFAM = PF12146)' T '35.2' 'not assigned.unknown' 'niben101scf09116_45122-50735' ' no hits & (original description: Putative PGSC0003DMG400041208, Description = , PFAM = PF09331)' T '35.2' 'not assigned.unknown' 'niben101scf09116_46999-49491' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09116_293251-295649' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09116_498523-503311' '(at1g03900 : 297.0) member of NAP family, an heterogeneous subfamily of the ATP-binding Cassette (ABC) superfamily of membrane transporters. The NAPs proteins are characterized by having only one nucleotide-binding folds (NBFs) domain.; non-intrinsic ABC protein 4 (NAP4); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: extracellular transport; LOCATED IN: membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Adaptin ear-binding coat-associated protein 1 NECAP-1 (InterPro:IPR012466); BEST Arabidopsis thaliana protein match is: Adaptin ear-binding coat-associated protein 1 NECAP-1 (TAIR:AT3G58600.1); Has 448 Blast hits to 448 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 218; Fungi - 61; Plants - 115; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (gnl|cdd|37711 : 255.0) no description available & (gnl|cdd|87402 : 221.0) no description available & (reliability: 594.0) & (original description: Putative At1g03900, Description = Uncharacterized protein At1g03900, PFAM = PF07933)' T '35.2' 'not assigned.unknown' 'niben101scf09119_145620-148390' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09123_101740-104460' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09127_63326-69776' '(at5g27560 : 441.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1995 (InterPro:IPR018962); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|87898 : 177.0) no description available & (reliability: 882.0) & (original description: Putative At5g27560, Description = Putative uncharacterized protein At5g27560, PFAM = PF09353)' T '35.2' 'not assigned.unknown' 'niben101scf09133_124416-127005' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09133_322326-326321' '(at2g42040 : 80.1) CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 219 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative MTR_7g093350, Description = WRC protein, PFAM = PF08879)' T '35.2' 'not assigned.unknown' 'niben101scf09140_12056-62793' ' no hits & (original description: Putative HM01045, Description = Retrovirus-related Pol polyprotein LINE-1, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf09140_64291-74956' '(at5g06590 : 186.0) unknown protein; Has 38 Blast hits to 38 proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 372.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09150_285987-288475' ' no hits & (original description: Putative , Description = , PFAM = PF15365)' T '35.2' 'not assigned.unknown' 'niben101scf09151_355359-357699' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09152_52454-60260' ' no hits & (original description: Putative PGSC0003DMG400025196, Description = Prefoldin chaperone subunit family protein, PFAM = PF01920)' T '35.2' 'not assigned.unknown' 'niben101scf09153_460379-475796' '(at3g21865 : 335.0) Interacts with PEX4 in a yeast two-hybrid. The PEX4 and PEX22 pair may be important during the remodeling of peroxisome matrix contents as glyoxysomes transition to leaf peroxisomes.; peroxin 22 (PEX22); Has 90 Blast hits to 90 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (reliability: 670.0) & (original description: Putative PEX22, Description = Peroxisome biogenesis protein 22, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09170_67140-72661' '(at2g26200 : 241.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410), Methyltransferase type 12 (InterPro:IPR013217); BEST Arabidopsis thaliana protein match is: Methyltransferase family protein (TAIR:AT1G54650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37572 : 215.0) no description available & (reliability: 482.0) & (original description: Putative omt3, Description = Methyltransferase-like protein 6, PFAM = PF08242)' T '35.2' 'not assigned.unknown' 'niben101scf09170_67181-73031' '(at2g26200 : 295.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410), Methyltransferase type 12 (InterPro:IPR013217); BEST Arabidopsis thaliana protein match is: Methyltransferase family protein (TAIR:AT1G54650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37572 : 258.0) no description available & (reliability: 590.0) & (original description: Putative METTL6, Description = Methyltransferase-like protein 6, PFAM = PF08242)' T '35.2' 'not assigned.unknown' 'niben101scf09172_78780-83361' '(at1g47740 : 339.0) PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT5G25170.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35545 : 224.0) no description available & (gnl|cdd|69428 : 163.0) no description available & (reliability: 678.0) & (original description: Putative dl4780c, Description = At5g25170, PFAM = PF05903)' T '35.2' 'not assigned.unknown' 'niben101scf09172_257012-259254' ' no hits & (original description: Putative , Description = , PFAM = PF00240)' T '35.2' 'not assigned.unknown' 'niben101scf09172_258847-262866' '(at1g19360 : 605.0) Nucleotide-diphospho-sugar transferase family protein; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT1G75110.1); Has 297 Blast hits to 291 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 280; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 1210.0) & (original description: Putative PGSC0003DMG400005150, Description = Glycosyltransferase, PFAM = PF03407)' T '35.2' 'not assigned.unknown' 'niben101scf09172_259255-285042' '(at1g19360 : 592.0) Nucleotide-diphospho-sugar transferase family protein; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT1G75110.1); Has 297 Blast hits to 291 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 280; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (gnl|cdd|36593 : 275.0) no description available & (reliability: 1184.0) & (original description: Putative RRA3, Description = Arabinosyltransferase RRA3, PFAM = PF03407;PF07228)' T '35.2' 'not assigned.unknown' 'niben101scf09186_131096-136494' ' (original description: Putative ARPI, Description = Proteinase inhibitor type-2 TR8, PFAM = PF02428;PF02428;PF02428;PF02428)' T '35.2' 'not assigned.unknown' 'niben101scf09186_161060-164578' ' no hits & (original description: Putative umc1712, Description = At1g22630/F12K8_2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09186_179287-181799' ' (original description: Putative ARPI, Description = Trypsin proteinase inhibitor, PFAM = PF02428;PF02428;PF02428)' T '35.2' 'not assigned.unknown' 'niben101scf09191_198966-202357' ' no hits & (original description: Putative PGSC0003DMG400007828, Description = , PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf09192_272505-284988' '(at4g13590 : 399.0) Uncharacterized protein family (UPF0016); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0016 (InterPro:IPR001727); BEST Arabidopsis thaliana protein match is: Uncharacterized protein family (UPF0016) (TAIR:AT1G64150.1). & (gnl|cdd|38092 : 229.0) no description available & (gnl|cdd|32302 : 123.0) no description available & (reliability: 798.0) & (original description: Putative At4g13590, Description = GDT1-like protein 2, chloroplastic, PFAM = PF01169;PF01169)' T '35.2' 'not assigned.unknown' 'niben101scf09202_47648-57935' '(at5g18460 : 610.0) Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G23340.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66735 : 272.0) no description available & (reliability: 1220.0) & (original description: Putative NIP1, Description = NEP-interacting protein 1, PFAM = PF14365;PF03080)' T '35.2' 'not assigned.unknown' 'niben101scf09209_329096-331338' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09211_40486-43085' '(at1g21280 : 80.5) CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative , Description = , PFAM = PF14244;PF03732)' T '35.2' 'not assigned.unknown' 'niben101scf09230_244807-247397' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf09234_51964-56513' '(at3g05100 : 451.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Has 105 Blast hits to 105 proteins in 44 species: Archae - 2; Bacteria - 62; Metazoa - 0; Fungi - 5; Plants - 26; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 902.0) & (original description: Putative BnaC07g27670D, Description = BnaC07g27670D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09236_67517-73721' '(at3g20300 : 473.0) Protein of unknown function (DUF3537); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3537 (InterPro:IPR021924); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3537) (TAIR:AT1G50630.1); Has 143 Blast hits to 143 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 946.0) & (original description: Putative MRB1, Description = Putative uncharacterized protein At4g22270, PFAM = PF12056)' T '35.2' 'not assigned.unknown' 'niben101scf09242_206796-209449' ' no hits & (original description: Putative LOC100282825, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09248_412611-415204' ' no hits & (original description: Putative , Description = , PFAM = PF05097)' T '35.2' 'not assigned.unknown' 'niben101scf09248_593254-598273' '(at2g38370 : 192.0) Plant protein of unknown function (DUF827); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT3G51720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72811 : 133.0) no description available & (reliability: 384.0) & (original description: Putative otg2, Description = WEB family plant protein, PFAM = PF05701;PF05701)' T '35.2' 'not assigned.unknown' 'niben101scf09248_777577-787450' '(at3g51640 : 528.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51650.1); Has 34 Blast hits to 34 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 1; Plants - 32; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 1056.0) & (original description: Putative BnaC08g22940D, Description = BnaC08g22940D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09253_26357-29193' '(at1g23710 : 104.0) Protein of unknown function (DUF1645); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT1G70420.1); Has 288 Blast hits to 282 proteins in 52 species: Archae - 0; Bacteria - 6; Metazoa - 16; Fungi - 11; Plants - 191; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|71256 : 81.7) no description available & (reliability: 208.0) & (original description: Putative , Description = , PFAM = PF07816)' T '35.2' 'not assigned.unknown' 'niben101scf09253_102554-105586' ' (original description: Putative ca, Description = Carbonate dehydratase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09260_464716-467264' '(at5g42655 : 135.0) Disease resistance-responsive (dirigent-like protein) family protein; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative Ccrd_023404, Description = Plant disease resistance response protein, PFAM = PF03018)' T '35.2' 'not assigned.unknown' 'niben101scf09264_29151-31411' ' no hits & (original description: Putative BnaC03g55230D, Description = BnaC03g55230D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09284_298042-300998' ' (original description: Putative glysoja_017378, Description = Transposon TX1 putative 149 kDa protein, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf09315_205956-210060' '(at1g80690 : 264.0) PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT5G25170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|35545 : 212.0) no description available & (gnl|cdd|69428 : 165.0) no description available & (reliability: 528.0) & (original description: Putative At5g25170, Description = At5g25170, PFAM = PF05903)' T '35.2' 'not assigned.unknown' 'niben101scf09317_88600-91001' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09317_200704-213868' '(at4g16807 : 90.9) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G33528.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09325_352948-364209' '(at1g24265 : 216.0) Protein of unknown function (DUF1664); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1664 (InterPro:IPR012458); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1664) (TAIR:AT1G24267.1). & (gnl|cdd|71327 : 150.0) no description available & (reliability: 432.0) & (original description: Putative bZIP56, Description = BZIP transcription factor bZIP56, PFAM = PF07889)' T '35.2' 'not assigned.unknown' 'niben101scf09334_221078-223359' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09348_4661-7669' ' no hits & (original description: Putative ASR2, Description = Abscisic stress-ripening protein 2, PFAM = PF02496)' T '35.2' 'not assigned.unknown' 'niben101scf09353_289081-292307' ' no hits & (original description: Putative At3g05900, Description = BnaC03g34430D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09357_138673-141636' ' no hits & (original description: Putative F383_18265, Description = ATP-dependent helicase/nuclease subunit A, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09360_190373-221860' '(gnl|cdd|69613 : 750.0) no description available & (at2g44260 : 651.0) Plant protein of unknown function (DUF946); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF946 (InterPro:IPR009291); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF946) (TAIR:AT2G44230.1); Has 355 Blast hits to 329 proteins in 91 species: Archae - 0; Bacteria - 23; Metazoa - 15; Fungi - 113; Plants - 198; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 1302.0) & (original description: Putative Sb02g037340, Description = Putative uncharacterized protein Sb02g037340, PFAM = PF06101)' T '35.2' 'not assigned.unknown' 'niben101scf09363_56793-59203' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09367_29779-31931' ' no hits & (original description: Putative , Description = Transport protein SEC31, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09368_6096-10474' ' no hits & (original description: Putative PGSC0003DMG400030843, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09368_7335-10471' ' no hits & (original description: Putative PGSC0003DMG400030843, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09368_215636-225814' '(at5g30490 : 117.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to 324 proteins in 149 species: Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|39973 : 86.3) no description available & (reliability: 234.0) & (original description: Putative CFDP1, Description = Putative uncharacterized protein Sb03g013270, PFAM = PF07572)' T '35.2' 'not assigned.unknown' 'niben101scf09372_96423-99503' '(at1g13340 : 165.0) Regulator of Vps4 activity in the MVB pathway protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061); BEST Arabidopsis thaliana protein match is: Regulator of Vps4 activity in the MVB pathway protein (TAIR:AT1G34220.2); Has 628 Blast hits to 628 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 164; Fungi - 130; Plants - 284; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (gnl|cdd|37238 : 159.0) no description available & (gnl|cdd|67036 : 114.0) no description available & (reliability: 330.0) & (original description: Putative PGSC0003DMG400012655, Description = Regulator of Vps4 activity in the MVB pathway protein, PFAM = PF03398)' T '35.2' 'not assigned.unknown' 'niben101scf09372_228256-295877' '(at1g67140 : 2132.0) SWEETIE (SWEETIE); FUNCTIONS IN: binding; INVOLVED IN: trehalose metabolic process, carbohydrate metabolic process, starch metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024). & (gnl|cdd|37033 : 610.0) no description available & (reliability: 4264.0) & (original description: Putative TCM_019487, Description = HEAT repeat-containing protein isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09372_250991-263550' '(at1g67140 : 223.0) SWEETIE (SWEETIE); FUNCTIONS IN: binding; INVOLVED IN: trehalose metabolic process, carbohydrate metabolic process, starch metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024). & (gnl|cdd|37033 : 96.6) no description available & (reliability: 446.0) & (original description: Putative Os06g0505100, Description = HEAT repeat-containing protein isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09372_412233-425686' '(at5g16060 : 112.0) Cytochrome c oxidase biogenesis protein Cmc1-like; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase biogenesis protein Cmc1-like (InterPro:IPR013892); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative Sb01g040610, Description = Putative uncharacterized protein Sb01g040610, PFAM = PF08583)' T '35.2' 'not assigned.unknown' 'niben101scf09372_495055-500701' '(at5g16030 : 190.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 380.0) & (original description: Putative At3g02500, Description = BnaA03g05810D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09387_52968-55511' ' (original description: Putative corC, Description = Lipid transfer protein, PFAM = PF14547)' T '35.2' 'not assigned.unknown' 'niben101scf09387_120516-122968' ' (original description: Putative corC, Description = Lipid transfer protein, PFAM = PF14547)' T '35.2' 'not assigned.unknown' 'niben101scf09392_85172-88566' '(at2g25680 : 478.0) Encodes a high-affinity molybdate transporter. Mutant has reduced concentrations of molybdate in roots and shoots, and reduced shoot and root length when growing on Mo-limited medium.; molybdate transporter 1 (MOT1); FUNCTIONS IN: molybdate ion transmembrane transporter activity, sulfate transmembrane transporter activity; INVOLVED IN: molybdate ion transport; LOCATED IN: mitochondrion, vacuole; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: sulfate transmembrane transporters (TAIR:AT1G80310.1); Has 761 Blast hits to 750 proteins in 291 species: Archae - 26; Bacteria - 503; Metazoa - 6; Fungi - 58; Plants - 70; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 956.0) & (original description: Putative MOT1, Description = Molybdate transporter 1, PFAM = PF16983;PF16983)' T '35.2' 'not assigned.unknown' 'niben101scf09401_88318-91536' '(at3g56290 : 158.0) unknown protein; Has 39 Blast hits to 39 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 316.0) & (original description: Putative PGSC0003DMG400024310, Description = F18O21_250, PFAM = PF05349)' T '35.2' 'not assigned.unknown' 'niben101scf09409_89048-92328' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09409_222623-224871' ' no hits & (original description: Putative samdc, Description = S-adenosylmethionine decarboxylase proenzyme, PFAM = PF08132)' T '35.2' 'not assigned.unknown' 'niben101scf09417_55918-60745' '(at1g51130 : 274.0) Nse4, component of Smc5/6 DNA repair complex; CONTAINS InterPro DOMAIN/s: Nse4 (InterPro:IPR014854); BEST Arabidopsis thaliana protein match is: Nse4, component of Smc5/6 DNA repair complex (TAIR:AT3G20760.1); Has 297 Blast hits to 295 proteins in 132 species: Archae - 0; Bacteria - 0; Metazoa - 72; Fungi - 132; Plants - 74; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (gnl|cdd|38077 : 152.0) no description available & (gnl|cdd|72167 : 103.0) no description available & (reliability: 548.0) & (original description: Putative NSE4A, Description = COG5125-like protein, PFAM = PF08743)' T '35.2' 'not assigned.unknown' 'niben101scf09417_284521-287418' ' no hits & (original description: Putative PGSC0003DMG401032203, Description = Cysteine-rich extensin-like protein-3, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09417_331118-333541' ' no hits & (original description: Putative PGSC0003DMG401032203, Description = Cysteine-rich extensin-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09426_175545-177889' ' no hits & (original description: Putative At4g14450, Description = Uncharacterized protein At4g14450, chloroplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09433_97006-99851' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09435_83119-84729' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09442_156431-159315' '(gnl|cdd|66742 : 150.0) no description available & (at4g35680 : 139.0) Arabidopsis protein of unknown function (DUF241); LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01590.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative PGSC0003DMG400001543, Description = , PFAM = PF03087)' T '35.2' 'not assigned.unknown' 'niben101scf09442_366889-369829' '(gnl|cdd|66742 : 116.0) no description available & (at4g35690 : 114.0) Arabidopsis protein of unknown function (DUF241); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT4G35710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative MTR_8g074450, Description = DUF241 domain protein, PFAM = PF03087)' T '35.2' 'not assigned.unknown' 'niben101scf09442_454047-460386' '(at4g16444 : 149.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CHD5-like protein (InterPro:IPR007514); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative BnaAnng19680D, Description = BnaAnng19680D protein, PFAM = PF04420)' T '35.2' 'not assigned.unknown' 'niben101scf09444_33928-43385' '(at5g47900 : 394.0) Protein of unknown function (DUF1624); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1624 (InterPro:IPR012429); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1624) (TAIR:AT5G27730.1). & (gnl|cdd|39881 : 371.0) no description available & (gnl|cdd|34021 : 151.0) no description available & (reliability: 788.0) & (original description: Putative Os05g0155700, Description = Os05g0155700 protein, PFAM = PF07786)' T '35.2' 'not assigned.unknown' 'niben101scf09447_39178-49567' ' no hits & (original description: Putative PGSC0003DMG400021529, Description = ATP-dependent RNA helicase DDX18, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09447_165234-180672' '(at3g19570 : 308.0) Encodes SCO3 (snowy cotyledon3), a member of a largely uncharacterized protein family unique to the plant kingdom. The sco3-1 mutation alters chloroplast morphology and development, reduces chlorophyll accumulation, impairs thylakoid formation and photosynthesis in seedlings, and results in photoinhibition under extreme CO(2) concentrations in mature leaves. SCO3 is targeted to the periphery of peroxisomes.; Family of unknown function (DUF566) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 (InterPro:IPR007573); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) (TAIR:AT1G49890.1); Has 4892 Blast hits to 1821 proteins in 299 species: Archae - 6; Bacteria - 1294; Metazoa - 1107; Fungi - 667; Plants - 251; Viruses - 59; Other Eukaryotes - 1508 (source: NCBI BLink). & (gnl|cdd|68069 : 233.0) no description available & (reliability: 616.0) & (original description: Putative SCO3, Description = Protein SNOWY COTYLEDON 3, PFAM = PF04484)' T '35.2' 'not assigned.unknown' 'niben101scf09455_126662-133292' '(at5g02770 : 100.0) unknown protein; Has 469 Blast hits to 336 proteins in 126 species: Archae - 0; Bacteria - 54; Metazoa - 249; Fungi - 22; Plants - 47; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 200.0) & (original description: Putative MOS11, Description = SAP domain-containing ribonucleoprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09455_224390-227157' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09467_94542-97507' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09467_222174-229776' '(at1g44000 : 254.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11911.1); Has 216 Blast hits to 212 proteins in 76 species: Archae - 0; Bacteria - 96; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 508.0) & (original description: Putative NYE1, Description = Protein STAY-GREEN, chloroplastic, PFAM = PF12638)' T '35.2' 'not assigned.unknown' 'niben101scf09472_109838-115598' ' no hits & (original description: Putative TCM_036188, Description = Uncharacterized protein isoform 1, PFAM = PF01476)' T '35.2' 'not assigned.unknown' 'niben101scf09472_216855-219754' '(at1g33800 : 360.0) Protein of unknown function (DUF579); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF579 (InterPro:IPR021148), Conserved hypothetical protein CHP01627 (InterPro:IPR006514); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF579) (TAIR:AT4G09990.1); Has 252 Blast hits to 251 proteins in 20 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 240; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|68247 : 350.0) no description available & (reliability: 720.0) & (original description: Putative GXM3, Description = Glucuronoxylan 4-O-methyltransferase 3, PFAM = PF04669)' T '35.2' 'not assigned.unknown' 'niben101scf09501_27625-32555' '(at1g02870 : 238.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosome biogenesis protein Nop16 (InterPro:IPR019002); Has 104 Blast hits to 104 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 63; Plants - 35; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|39968 : 146.0) no description available & (gnl|cdd|87965 : 106.0) no description available & (reliability: 476.0) & (original description: Putative At1g02870, Description = At1g02870, PFAM = PF09420)' T '35.2' 'not assigned.unknown' 'niben101scf09502_201063-212534' '(gnl|cdd|86910 : 390.0) no description available & (gnl|cdd|38133 : 385.0) no description available & (at2g21120 : 384.0) Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF803) (TAIR:AT4G38730.1); Has 1321 Blast hits to 1303 proteins in 250 species: Archae - 0; Bacteria - 151; Metazoa - 424; Fungi - 360; Plants - 267; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (reliability: 768.0) & (original description: Putative At2g21120, Description = Probable magnesium transporter NIPA6, PFAM = PF05653)' T '35.2' 'not assigned.unknown' 'niben101scf09505_202870-206405' ' no hits & (original description: Putative , Description = 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09510_34489-50099' '(at2g30695 : 103.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 206.0) & (original description: Putative pco148714(246), Description = Trigger factor, PFAM = PF05697)' T '35.2' 'not assigned.unknown' 'niben101scf09512_542528-545474' ' (original description: Putative CerMADS1, Description = Os06g0504100 protein, PFAM = PF00319)' T '35.2' 'not assigned.unknown' 'niben101scf09512_544877-559810' '(at4g01290 : 278.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 1797 Blast hits to 1352 proteins in 216 species: Archae - 0; Bacteria - 202; Metazoa - 850; Fungi - 267; Plants - 109; Viruses - 0; Other Eukaryotes - 369 (source: NCBI BLink). & (reliability: 556.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09516_17204-21259' '(at3g60810 : 252.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1499 (InterPro:IPR010865); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34126 : 96.2) no description available & (reliability: 504.0) & (original description: Putative , Description = , PFAM = PF07386)' T '35.2' 'not assigned.unknown' 'niben101scf09517_248142-251266' '(at1g68490 : 140.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09523_46132-57259' '(at2g43110 : 244.0) unknown protein; Has 212 Blast hits to 211 proteins in 96 species: Archae - 0; Bacteria - 6; Metazoa - 62; Fungi - 91; Plants - 31; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 488.0) & (original description: Putative MTR_1g116820, Description = DEAD-box helicase family protein, PFAM = PF14617)' T '35.2' 'not assigned.unknown' 'niben101scf09527_45758-50948' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09527_97418-99861' ' no hits & (original description: Putative PGSC0003DMG400014888, Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, putative, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'niben101scf09550_112056-152914' ' (original description: Putative SS3, Description = Soluble starch synthase 3, chloroplastic/amyloplastic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09552_255149-262690' '(at4g24290 : 928.0) MAC/Perforin domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Membrane attack complex component/perforin (MACPF) domain (InterPro:IPR020864), Membrane attack complex component/perforin (MACPF) domain, metazoa (InterPro:IPR020865); BEST Arabidopsis thaliana protein match is: MAC/Perforin domain-containing protein (TAIR:AT1G28380.1); Has 264 Blast hits to 263 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 51; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|47763 : 95.5) no description available & (reliability: 1856.0) & (original description: Putative At4g24290, Description = MACPF domain-containing protein At4g24290, PFAM = PF01823)' T '35.2' 'not assigned.unknown' 'niben101scf09554_75218-78174' ' no hits & (original description: Putative , Description = , PFAM = PF13912;PF13912;PF13912)' T '35.2' 'not assigned.unknown' 'niben101scf09556_39719-42018' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09556_286777-291431' '(at5g04460 : 261.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Ring/U-Box superfamily protein (TAIR:AT2G27950.1). & (reliability: 522.0) & (original description: Putative TRIUR3_01850, Description = Protein neuralized, PFAM = PF13920)' T '35.2' 'not assigned.unknown' 'niben101scf09559_113082-116002' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09560_153024-155992' '(at4g19950 : 335.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44860.1); Has 338 Blast hits to 330 proteins in 72 species: Archae - 2; Bacteria - 94; Metazoa - 7; Fungi - 0; Plants - 232; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 670.0) & (original description: Putative ORF, Description = Putative uncharacterized protein ORF, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09578_319702-322196' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09592_68177-72387' '(at5g62960 : 355.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 710.0) & (original description: Putative Os02g0130600, Description = Os02g0130600 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09595_71773-74285' '(at2g23690 : 152.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37240.1); Has 243 Blast hits to 243 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 304.0) & (original description: Putative , Description = , PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf09595_389118-400954' ' (original description: Putative glysoja_020902, Description = Transmembrane protein 131-like, PFAM = PF12371)' T '35.2' 'not assigned.unknown' 'niben101scf09599_151837-154782' ' no hits & (original description: Putative PGSC0003DMG400013529, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09603_516651-528583' ' no hits & (original description: Putative , Description = , PFAM = PF00035;PF00035)' T '35.2' 'not assigned.unknown' 'niben101scf09610_92262-94986' ' no hits & (original description: Putative , Description = , PFAM = PF00582)' T '35.2' 'not assigned.unknown' 'niben101scf09620_202030-206374' '(at3g61870 : 278.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 556.0) & (original description: Putative TEF9, Description = Predicted protein, PFAM = PF13301)' T '35.2' 'not assigned.unknown' 'niben101scf09623_11389-16431' '(at1g54385 : 483.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), Survival motor neuron interacting protein 1 (InterPro:IPR007022); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G03970.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 966.0) & (original description: Putative PGSC0003DMG400008643, Description = ARM repeat superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09628_14897-18104' '(at1g31940 : 141.0) unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35585.1); Has 67 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 282.0) & (original description: Putative At1g31940, Description = At1g31940/F5M6.6, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09649_70859-73011' ' no hits & (original description: Putative PGSC0003DMG400036344, Description = , PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'niben101scf09654_345558-348079' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09658_118454-125551' '(at1g08640 : 281.0) Chloroplast J-like domain 1 (CJD1); LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 82 Blast hits to 80 proteins in 30 species: Archae - 0; Bacteria - 24; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 562.0) & (original description: Putative CJD1, Description = Chloroplast J-like domain 1-containing protein, PFAM = PF11833)' T '35.2' 'not assigned.unknown' 'niben101scf09659_99077-101940' '(at4g10800 : 220.0) BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT3G05675.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 440.0) & (original description: Putative F18C1, Description = BTB/POZ domain-containing protein At3g05675, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09659_326470-335974' '(at3g10250 : 265.0) Plant protein 1589 of unknown function; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476); BEST Arabidopsis thaliana protein match is: Plant protein 1589 of unknown function (TAIR:AT5G04090.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|88257 : 83.4) no description available & (reliability: 530.0) & (original description: Putative PGSC0003DMG400032127, Description = Histidine--tRNA ligase, PFAM = PF09713)' T '35.2' 'not assigned.unknown' 'niben101scf09663_613400-617658' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09666_327816-330931' ' no hits & (original description: Putative PGSC0003DMG400002161, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09678_122559-126361' '(gnl|cdd|68893 : 195.0) no description available & (at2g38070 : 139.0) Protein of unknown function (DUF740); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF740) (TAIR:AT3G09070.1); Has 108 Blast hits to 106 proteins in 27 species: Archae - 0; Bacteria - 3; Metazoa - 6; Fungi - 2; Plants - 76; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative , Description = , PFAM = PF05340)' T '35.2' 'not assigned.unknown' 'niben101scf09701_139235-141492' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09703_319182-419676' ' (original description: Putative PGSC0003DMG400019390, Description = Callose synthase 9, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf09706_45348-51289' '(at1g72480 : 742.0) Lung seven transmembrane receptor family protein; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT2G01070.1); Has 596 Blast hits to 594 proteins in 172 species: Archae - 0; Bacteria - 0; Metazoa - 236; Fungi - 150; Plants - 154; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|37779 : 516.0) no description available & (gnl|cdd|87161 : 351.0) no description available & (reliability: 1484.0) & (original description: Putative Os09g0439700, Description = Membrane protein PTM1-like, PFAM = PF06814)' T '35.2' 'not assigned.unknown' 'niben101scf09709_50741-53223' '(at4g32870 : 129.0) Polyketide cyclase/dehydrase and lipid transport superfamily protein; CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT2G25770.2); Has 254 Blast hits to 254 proteins in 94 species: Archae - 0; Bacteria - 125; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 258.0) & (original description: Putative , Description = , PFAM = PF10604)' T '35.2' 'not assigned.unknown' 'niben101scf09710_7348-9824' ' (original description: Putative rpl10, Description = Ribosomal protein L10, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09716_132888-135547' ' no hits & (original description: Putative , Description = Retrotransposon gag protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09716_132982-135616' ' no hits & (original description: Putative , Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09716_142294-149193' '(at3g18440 : 461.0) Belongs to the aluminum-activated malate transporter family. Encodes a vacuolar malate channel. Expressed in all parts of plants. Almost exclusively expressed in mesophyll cells of leaves.; aluminum-activated malate transporter 9 (ALMT9); CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G18420.1); Has 814 Blast hits to 808 proteins in 259 species: Archae - 0; Bacteria - 440; Metazoa - 0; Fungi - 20; Plants - 338; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|39909 : 395.0) no description available & (gnl|cdd|85194 : 149.0) no description available & (reliability: 922.0) & (original description: Putative ALMT3, Description = Aluminum-activated malate transporter 9, PFAM = PF11744)' T '35.2' 'not assigned.unknown' 'niben101scf09716_287257-290112' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09741_4273-7418' ' no hits & (original description: Putative PI-1, Description = Proteinase inhibitor I-like, PFAM = PF00280)' T '35.2' 'not assigned.unknown' 'niben101scf09742_77589-82468' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09751_9985-18884' '(at4g28910 : 228.0) novel interactor of JAZ (NINJA); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: response to jasmonic acid stimulus, jasmonic acid mediated signaling pathway; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1675 (InterPro:IPR012463); BEST Arabidopsis thaliana protein match is: ABI five binding protein 3 (TAIR:AT3G29575.4); Has 317 Blast hits to 301 proteins in 73 species: Archae - 2; Bacteria - 15; Metazoa - 43; Fungi - 39; Plants - 175; Viruses - 3; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative MC410, Description = Ninja-family protein mc410, PFAM = PF16135)' T '35.2' 'not assigned.unknown' 'niben101scf09760_77749-83186' '(at5g51170 : 316.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0406 (InterPro:IPR019146); Has 166 Blast hits to 166 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 19; Plants - 35; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|38312 : 249.0) no description available & (reliability: 632.0) & (original description: Putative PGSC0003DMG400008328, Description = U6 snRNA phosphodiesterase, PFAM = PF09749)' T '35.2' 'not assigned.unknown' 'niben101scf09760_144949-158292' '(at5g61670 : 468.0) Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons.; BEST Arabidopsis thaliana protein match is: chaperone protein dnaJ-related (TAIR:AT5G06130.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 936.0) & (original description: Putative Or1, Description = Orange 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09764_264440-268811' '(gnl|cdd|66792 : 103.0) no description available & (at3g02645 : 80.9) Plant protein of unknown function (DUF247); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50150.1). & (reliability: 161.8) & (original description: Putative Os06g0179500, Description = Os06g0179500 protein, PFAM = PF03140;PF03140)' T '35.2' 'not assigned.unknown' 'niben101scf09767_108301-111773' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09767_113972-117636' '(at4g08810 : 734.0) Calcium binding protein involved in cryptochrome and phytochrome coaction; SUB1; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04280.1); Has 128 Blast hits to 128 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 127; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 1468.0) & (original description: Putative SUB1, Description = AT4g08810/T32A17_120, PFAM = PF10250)' T '35.2' 'not assigned.unknown' 'niben101scf09773_9038-11700' '(at3g55420 : 252.0) unknown protein; Has 21 Blast hits to 21 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 504.0) & (original description: Putative Os05g0459300, Description = Os05g0459300 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09790_21545-24318' '(at4g16530 : 113.0) Family of unknown function (DUF577); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF577 (InterPro:IPR007598); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF577) (TAIR:AT5G37410.1); Has 736 Blast hits to 673 proteins in 194 species: Archae - 0; Bacteria - 81; Metazoa - 201; Fungi - 106; Plants - 128; Viruses - 0; Other Eukaryotes - 220 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative Sb01g017640, Description = Putative uncharacterized protein Sb01g017640, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09791_73522-83920' '(at1g19690 : 364.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); Has 3422 Blast hits to 3422 proteins in 1044 species: Archae - 54; Bacteria - 2233; Metazoa - 3; Fungi - 5; Plants - 67; Viruses - 4; Other Eukaryotes - 1056 (source: NCBI BLink). & (gnl|cdd|35966 : 164.0) no description available & (reliability: 728.0) & (original description: Putative At1g19690, Description = At1g19690, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09792_81649-85468' ' no hits & (original description: Putative RIC7, Description = CRIB domain-containing protein RIC7, PFAM = PF00786)' T '35.2' 'not assigned.unknown' 'niben101scf09792_204251-209365' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09792_297780-306331' '(at2g20495 : 269.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Serine-threonine protein kinase 19 (InterPro:IPR018865); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 538.0) & (original description: Putative , Description = Putative serine/threonine-protein kinase 19-like, PFAM = PF10494)' T '35.2' 'not assigned.unknown' 'niben101scf09808_12796-15144' ' no hits & (original description: Putative BnaC08g10890D, Description = BnaA08g08220D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09811_136230-152904' ' no hits & (original description: Putative , Description = , PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben101scf09812_94696-99108' ' no hits & (original description: Putative PGSC0003DMG400009946, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09812_186025-188735' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09817_128978-137186' '(at1g56230 : 741.0) Protein of unknown function (DUF1399); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1399 (InterPro:IPR009836); BEST Arabidopsis thaliana protein match is: Protein of unknown function (duplicated DUF1399) (TAIR:AT2G22660.2). & (gnl|cdd|70629 : 121.0) no description available & (reliability: 1482.0) & (original description: Putative Sb03g013780, Description = Putative uncharacterized protein Sb03g013780, PFAM = PF07173;PF07173)' T '35.2' 'not assigned.unknown' 'niben101scf09819_13724-20986' '(at1g67620 : 109.0) Lojap-related protein; CONTAINS InterPro DOMAIN/s: Iojap-related protein (InterPro:IPR004394); Has 4659 Blast hits to 4659 proteins in 1794 species: Archae - 0; Bacteria - 3277; Metazoa - 93; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 1229 (source: NCBI BLink). & (gnl|cdd|38422 : 90.1) no description available & (reliability: 218.0) & (original description: Putative At1g67620, Description = Protein Iojap-related, mitochondrial, PFAM = PF02410)' T '35.2' 'not assigned.unknown' 'niben101scf09819_498208-500966' ' no hits & (original description: Putative MKS1, Description = MAP kinase substrate 1, PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf09825_74701-80565' '(at4g30993 : 160.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative TCM_037088, Description = Calcineurin-like metallo-phosphoesterase superfamily protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09832_1525-11131' '(at5g25757 : 875.0) RNA polymerase I-associated factor PAF67; CONTAINS InterPro DOMAIN/s: RNA polymerase I-associated factor PAF67 (InterPro:IPR019382); BEST Arabidopsis thaliana protein match is: RNA polymerase I-associated factor PAF67 (TAIR:AT5G25754.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38881 : 357.0) no description available & (reliability: 1750.0) & (original description: Putative v1g169424, Description = Eukaryotic translation initiation factor 3 subunit L, PFAM = PF10255)' T '35.2' 'not assigned.unknown' 'niben101scf09834_50947-54554' '(at4g29560 : 399.0) CONTAINS InterPro DOMAIN/s: Fanconi Anaemia group E protein, C-terminal (InterPro:IPR021025); Has 41 Blast hits to 41 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 798.0) & (original description: Putative , Description = , PFAM = PF11510)' T '35.2' 'not assigned.unknown' 'niben101scf09847_66969-70656' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09849_33921-42472' ' no hits & (original description: Putative KK1_008761, Description = Protein FAR1-RELATED SEQUENCE 3, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09862_160472-169677' '(at5g17070 : 108.0) CONTAINS InterPro DOMAIN/s: Protein phosphatase 4 core regulatory subunit R2 (InterPro:IPR015267); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative BnaC02g07010D, Description = BnaC02g07010D protein, PFAM = PF09184)' T '35.2' 'not assigned.unknown' 'niben101scf09878_343268-346706' ' no hits & (original description: Putative , Description = , PFAM = PF13952)' T '35.2' 'not assigned.unknown' 'niben101scf09885_77335-86990' '(at3g53010 : 240.0) Domain of unknown function (DUF303) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF303, acetylesterase putative (InterPro:IPR005181); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF303) (TAIR:AT4G34215.2); Has 339 Blast hits to 339 proteins in 106 species: Archae - 2; Bacteria - 221; Metazoa - 0; Fungi - 1; Plants - 86; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (reliability: 480.0) & (original description: Putative At3g53010, Description = Receptor protein kinase-like protein, PFAM = PF03629)' T '35.2' 'not assigned.unknown' 'niben101scf09885_117119-120765' '(at4g34215 : 197.0) Encodes a member of the SGNH-hydrolase superfamily of enzymes. The enzymes of the SGNH-hydrolase superfamily facilitate the hydrolysis of ester, thioester and amide bonds in a range of substrates including complex polysaccharides, lysophospholipids, acyl-CoA esters and other compounds.; Domain of unknown function (DUF303) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF303, acetylesterase putative (InterPro:IPR005181); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF303) (TAIR:AT3G53010.1); Has 345 Blast hits to 345 proteins in 104 species: Archae - 2; Bacteria - 231; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative At3g53010, Description = Receptor protein kinase-like protein, PFAM = PF03629)' T '35.2' 'not assigned.unknown' 'niben101scf09929_190977-194209' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf09938_26370-32610' '(at4g33625 : 208.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Golgi apparatus membrane protein TVP15 (InterPro:IPR013714); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 416.0) & (original description: Putative BnaC01g04610D, Description = BnaC01g04610D protein, PFAM = PF08507)' T '35.2' 'not assigned.unknown' 'niben101scf09938_101668-114315' '(at2g14110 : 293.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; CONTAINS InterPro DOMAIN/s: HAD-superfamily phosphatase, subfamily IIIC (InterPro:IPR010033), NLI interacting factor (InterPro:IPR004274); Has 332 Blast hits to 325 proteins in 144 species: Archae - 0; Bacteria - 33; Metazoa - 65; Fungi - 121; Plants - 76; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|39749 : 133.0) no description available & (reliability: 586.0) & (original description: Putative pco127416b, Description = Magnesium-dependent phosphatase 1, PFAM = PF12689;PF12689)' T '35.2' 'not assigned.unknown' 'niben101scf09938_119759-124843' ' (original description: Putative MTS1, Description = Putative (-)-camphene/tricyclene synthase, chloroplastic-like, PFAM = PF01397)' T '35.2' 'not assigned.unknown' 'niben101scf09953_5666-11695' '(at3g01810 : 543.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2). & (reliability: 1086.0) & (original description: Putative BnaC04g02610D, Description = BnaC04g02610D protein, PFAM = PF10358)' T '35.2' 'not assigned.unknown' 'niben101scf09954_168011-177242' '(at2g44525 : 229.0) Protein of unknown function (DUF498/DUF598); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF498 (InterPro:IPR007523); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF498/DUF598) (TAIR:AT3G60150.1); Has 933 Blast hits to 933 proteins in 412 species: Archae - 2; Bacteria - 549; Metazoa - 118; Fungi - 87; Plants - 61; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). & (gnl|cdd|38573 : 173.0) no description available & (gnl|cdd|86661 : 89.9) no description available & (reliability: 458.0) & (original description: Putative , Description = Putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like, PFAM = PF04430)' T '35.2' 'not assigned.unknown' 'niben101scf09977_41963-47165' '(at4g29520 : 193.0) LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Saposin B (InterPro:IPR008139); Has 137 Blast hits to 137 proteins in 50 species: Archae - 2; Bacteria - 0; Metazoa - 41; Fungi - 10; Plants - 36; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 386.0) & (original description: Putative At4g29520, Description = BnaA08g13380D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09987_276024-279873' ' no hits & (original description: Putative PGSC0003DMG400002161, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09989_122045-124479' '(at2g01300 : 125.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15010.1); Has 73 Blast hits to 73 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative TCM_010818, Description = Mediator of RNA polymerase II transcription subunit 18, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09996_210261-212434' ' no hits & (original description: Putative , Description = Arabinogalactan peptide 14, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf09997_115251-122485' '(at3g24630 : 119.0) unknown protein; Has 5348 Blast hits to 3182 proteins in 353 species: Archae - 0; Bacteria - 481; Metazoa - 1959; Fungi - 405; Plants - 180; Viruses - 10; Other Eukaryotes - 2313 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative PGSC0003DMG400015636, Description = , PFAM = PF14309)' T '35.2' 'not assigned.unknown' 'niben101scf10007_49833-54306' '(at5g09960 : 127.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative At5g09960, Description = At5g09960, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10015_517192-525545' '(at3g55350 : 449.0) PIF / Ping-Pong family of plant transposases; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G63270.1); Has 1213 Blast hits to 1213 proteins in 135 species: Archae - 0; Bacteria - 2; Metazoa - 520; Fungi - 50; Plants - 592; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|39785 : 197.0) no description available & (reliability: 898.0) & (original description: Putative At3g63270, Description = Putative uncharacterized protein At3g63270, PFAM = PF13359)' T '35.2' 'not assigned.unknown' 'niben101scf10018_21317-23622' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10018_37049-39519' ' no hits & (original description: Putative , Description = , PFAM = PF04844)' T '35.2' 'not assigned.unknown' 'niben101scf10022_149259-151516' '(gnl|cdd|66742 : 126.0) no description available & (at4g35690 : 107.0) Arabidopsis protein of unknown function (DUF241); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT4G35710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative PGSC0003DMG400001539, Description = , PFAM = PF03087)' T '35.2' 'not assigned.unknown' 'niben101scf10050_106372-116332' '(at5g51180 : 500.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G25770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39573 : 287.0) no description available & (gnl|cdd|68625 : 226.0) no description available & (reliability: 1000.0) & (original description: Putative At5g51180, Description = AT5G51180 protein, PFAM = PF05057)' T '35.2' 'not assigned.unknown' 'niben101scf10065_4524-15821' '(at5g65950 : 1315.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1683, C-terminal (InterPro:IPR012880), Foie gras liver health family 1 (InterPro:IPR021773); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71356 : 135.0) no description available & (reliability: 2630.0) & (original description: Putative , Description = Ribose-phosphate pyrophosphokinase 4, PFAM = PF12742;PF11817)' T '35.2' 'not assigned.unknown' 'niben101scf10065_199538-203164' '(at2g38320 : 431.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 34 (TBL34); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 35 (TAIR:AT5G01620.2); Has 1346 Blast hits to 1317 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 1344; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|72785 : 178.0) no description available & (reliability: 862.0) & (original description: Putative TBL34, Description = Protein trichome birefringence-like 34, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf10073_14411-18984' '(at5g58005 : 140.0) Cytochrome c oxidase, subunit Vib family protein; FUNCTIONS IN: cytochrome-c oxidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIb (InterPro:IPR003213); Has 136 Blast hits to 136 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 50; Fungi - 38; Plants - 46; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 280.0) & (original description: Putative At5g58005, Description = AT5G58005 protein, PFAM = PF02297)' T '35.2' 'not assigned.unknown' 'niben101scf10085_114962-117570' '(gnl|cdd|68159 : 84.2) no description available & (at1g18265 : 80.5) Protein of unknown function, DUF593; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT5G16720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative PGSC0003DMG400010672, Description = BnaC05g14010D protein, PFAM = PF04576)' T '35.2' 'not assigned.unknown' 'niben101scf10086_1-79394' ' (original description: Putative Tgt1ORF2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf10092_88041-95450' '(at2g01870 : 99.4) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 11 Blast hits to 11 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 198.8) & (original description: Putative PGSC0003DMG400033336, Description = Protoheme IX farnesyltransferase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10101_29925-42971' '(at2g23940 : 235.0) Protein of unknown function (DUF788); LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF788 (InterPro:IPR008506); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF788) (TAIR:AT4G30500.1); Has 311 Blast hits to 311 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 117; Fungi - 102; Plants - 52; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (gnl|cdd|69158 : 199.0) no description available & (gnl|cdd|38479 : 197.0) no description available & (reliability: 470.0) & (original description: Putative BnaA03g50210D, Description = BnaA03g50210D protein, PFAM = PF05620)' T '35.2' 'not assigned.unknown' 'niben101scf10103_406536-410838' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10103_408869-426164' '(at4g29790 : 647.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits to 357 proteins in 124 species: Archae - 0; Bacteria - 74; Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other Eukaryotes - 190 (source: NCBI BLink). & (reliability: 1294.0) & (original description: Putative BnaC01g11870D, Description = BnaC01g11870D protein, PFAM = PF10198)' T '35.2' 'not assigned.unknown' 'niben101scf10107_138852-144937' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10122_235003-241088' '(at3g26950 : 506.0) unknown protein; Has 27 Blast hits to 27 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1012.0) & (original description: Putative TCM_017276, Description = Uncharacterized protein isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10144_273486-276151' '(gnl|cdd|68643 : 151.0) no description available & (at5g27370 : 85.1) Protein of unknown function (DUF679); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF679 (InterPro:IPR007770); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF679) (TAIR:AT4G18425.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 170.2) & (original description: Putative Os01g0389700, Description = Os01g0389700 protein, PFAM = PF05078)' T '35.2' 'not assigned.unknown' 'niben101scf10152_90661-99267' '(at2g40400 : 912.0) Protein of unknown function (DUF399 and DUF3411); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF399 (InterPro:IPR007314), Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF399 and DUF3411) (TAIR:AT3G56140.1); Has 496 Blast hits to 496 proteins in 118 species: Archae - 0; Bacteria - 198; Metazoa - 0; Fungi - 0; Plants - 277; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|86570 : 223.0) no description available & (reliability: 1824.0) & (original description: Putative RER5, Description = Protein RETICULATA-RELATED 5, chloroplastic, PFAM = PF04187;PF11891)' T '35.2' 'not assigned.unknown' 'niben101scf10152_275003-286216' ' no hits & (original description: Putative , Description = , PFAM = PF10539)' T '35.2' 'not assigned.unknown' 'niben101scf10157_115000-117428' ' no hits & (original description: Putative , Description = OSJNBa0091D06.8 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10157_115776-118519' ' (original description: Putative , Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein, PFAM = PF13456)' T '35.2' 'not assigned.unknown' 'niben101scf10162_18947-21288' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10162_177594-182772' '(at1g10710 : 121.0) Computational predictions suggested the presence of a small cysteine-rich protein downstream of this gene model (Silverstein 2007), but subsequent analysis revealed that this region contains a tenth exon for the At1g10710 gene which is depicted in the At1g10710.1 gene model.; POOR HOMOLOGOUS SYNAPSIS 1 (PHS1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: zygotene, synapsis, leptotene; LOCATED IN: cytoplasm; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; Has 27 Blast hits to 26 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative PHS1, Description = Poor ous synapsis 1, putative isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10169_105425-110240' '(at2g40320 : 540.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 33 (TBL33); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 32 (TAIR:AT3G11030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72785 : 171.0) no description available & (reliability: 1080.0) & (original description: Putative TBL31, Description = Protein trichome birefringence-like 31, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf10169_115150-120699' '(at2g40320 : 573.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 33 (TBL33); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 32 (TAIR:AT3G11030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72785 : 187.0) no description available & (reliability: 1146.0) & (original description: Putative ESK1, Description = Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf10169_210187-215666' '(at2g40320 : 613.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 33 (TBL33); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 32 (TAIR:AT3G11030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72785 : 189.0) no description available & (reliability: 1226.0) & (original description: Putative TBL33, Description = Protein trichome birefringence-like 33, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf10169_215510-226846' '(at2g40316 : 335.0) FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 27 (InterPro:IPR018939); Has 135 Blast hits to 135 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi - 63; Plants - 31; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 670.0) & (original description: Putative At2g40316, Description = Putative uncharacterized protein At2g40316, PFAM = PF09451)' T '35.2' 'not assigned.unknown' 'niben101scf10169_221298-226960' '(at2g40316 : 170.0) FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 27 (InterPro:IPR018939); Has 135 Blast hits to 135 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi - 63; Plants - 31; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative At2g40316, Description = BnaA05g05440D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10189_118009-120389' ' no hits & (original description: Putative NCED6, Description = 9-cis-epoxycarotenoid dioxygenase 6, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10206_68580-70891' '(at3g10120 : 80.5) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03890.1); Has 57 Blast hits to 57 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative , Description = , PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf10215_9946-13129' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10217_55151-58984' '(at5g13890 : 231.0) Family of unknown function (DUF716) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32120.1); Has 219 Blast hits to 219 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 219; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 462.0) & (original description: Putative At5g13890, Description = At5g13890, PFAM = PF04819)' T '35.2' 'not assigned.unknown' 'niben101scf10217_256083-258071' ' (original description: Putative TOM7-1, Description = Mitochondrial import receptor subunit TOM7-1, PFAM = PF08038)' T '35.2' 'not assigned.unknown' 'niben101scf10219_63832-65400' '(at4g24130 : 114.0) Protein of unknown function, DUF538; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT5G46230.1); Has 362 Blast hits to 362 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86647 : 112.0) no description available & (reliability: 228.0) & (original description: Putative SVB, Description = At1g56580/F25P12_18, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben101scf10224_57840-60539' '(at2g27830 : 146.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits to 131 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 292.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10232_254318-259115' '(at1g47980 : 361.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62730.1); Has 169 Blast hits to 169 proteins in 41 species: Archae - 0; Bacteria - 68; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 722.0) & (original description: Putative At1g47980, Description = Desiccation-related protein PCC13-62, PFAM = PF13668)' T '35.2' 'not assigned.unknown' 'niben101scf10232_398223-401968' ' no hits & (original description: Putative pco141696, Description = AT3g17120/K14A17_24, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10235_213367-215915' ' no hits & (original description: Putative LIF, Description = Transcriptional regulator TAC1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10241_32340-37319' '(at2g28150 : 254.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF966 (InterPro:IPR010369), Uncharacterised conserved protein UCP031043 (InterPro:IPR021182); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF966) (TAIR:AT5G59790.1); Has 2510 Blast hits to 686 proteins in 184 species: Archae - 0; Bacteria - 433; Metazoa - 315; Fungi - 216; Plants - 186; Viruses - 4; Other Eukaryotes - 1356 (source: NCBI BLink). & (gnl|cdd|69644 : 240.0) no description available & (reliability: 508.0) & (original description: Putative At2g28150, Description = Putative uncharacterized protein At2g28150, PFAM = PF06136;PF06136)' T '35.2' 'not assigned.unknown' 'niben101scf10241_103850-109130' '(at1g10660 : 289.0) unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 578.0) & (original description: Putative BnaC05g08190D, Description = BnaC05g08190D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10241_105703-109172' '(at1g70505 : 139.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10660.1); Has 141 Blast hits to 140 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 135; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative BnaA04g01000D, Description = BnaA04g01000D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10241_233183-235866' ' no hits & (original description: Putative PGSC0003DMG400029878, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10241_279575-294562' '(at5g11960 : 425.0) Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 850.0) & (original description: Putative At5g11960, Description = Probable magnesium transporter NIPA9, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10241_355585-357965' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10252_11714-14034' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Putative reverse transcriptase family member, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10260_88450-90656' ' (original description: Putative S1FA2, Description = DNA-binding protein S1FA2, PFAM = PF04689)' T '35.2' 'not assigned.unknown' 'niben101scf10262_38917-46624' '(at2g23090 : 97.4) Uncharacterised protein family SERF; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family SERF (InterPro:IPR007513); Has 164 Blast hits to 164 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 42; Plants - 89; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 194.8) & (original description: Putative , Description = Leucine-rich repeat family protein, PFAM = PF04419;PF12907)' T '35.2' 'not assigned.unknown' 'niben101scf10262_74774-77775' '(at4g33890 : 196.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative PGSC0003DMG400013021, Description = Os04g0284500 protein, PFAM = PF12767)' T '35.2' 'not assigned.unknown' 'niben101scf10283_123104-151543' '(at1g36050 : 664.0) Endoplasmic reticulum vesicle transporter protein; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1692 (InterPro:IPR012936); BEST Arabidopsis thaliana protein match is: Endoplasmic reticulum vesicle transporter protein (TAIR:AT1G22200.1); Has 1261 Blast hits to 1092 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 439; Fungi - 275; Plants - 277; Viruses - 0; Other Eukaryotes - 270 (source: NCBI BLink). & (gnl|cdd|37878 : 458.0) no description available & (gnl|cdd|87414 : 280.0) no description available & (reliability: 1328.0) & (original description: Putative ergic3, Description = Endoplasmic reticulum-Golgi intermediate compartment protein 3, PFAM = PF07970;PF13850)' T '35.2' 'not assigned.unknown' 'niben101scf10283_164209-197718' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10287_106202-138786' ' no hits & (original description: Putative KK1_033282, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf10287_213556-227713' '(at4g25330 : 106.0) unknown protein; Has 21 Blast hits to 21 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative PGSC0003DMG401004292, Description = Putative ovule protein, PFAM = PF16719)' T '35.2' 'not assigned.unknown' 'niben101scf10287_215231-220059' ' no hits & (original description: Putative PGSC0003DMG400017406, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10298_413-4158' '(at3g53010 : 255.0) Domain of unknown function (DUF303) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF303, acetylesterase putative (InterPro:IPR005181); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF303) (TAIR:AT4G34215.2); Has 339 Blast hits to 339 proteins in 106 species: Archae - 2; Bacteria - 221; Metazoa - 0; Fungi - 1; Plants - 86; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|86388 : 84.6) no description available & (reliability: 510.0) & (original description: Putative At4g34215, Description = Probable carbohydrate esterase At4g34215, PFAM = PF03629)' T '35.2' 'not assigned.unknown' 'niben101scf10298_171602-173787' ' no hits & (original description: Putative PGSC0003DMG400006811, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10298_327517-336529' '(at3g12650 : 128.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 31 Blast hits to 31 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative PHYPADRAFT_130691, Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10300_8292-16456' '(at2g28480 : 345.0) RNA-binding CRS1 / YhbY (CRM) domain protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain protein (TAIR:AT4G13070.1); Has 308 Blast hits to 279 proteins in 29 species: Archae - 0; Bacteria - 5; Metazoa - 22; Fungi - 0; Plants - 268; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|37201 : 165.0) no description available & (gnl|cdd|85815 : 96.7) no description available & (reliability: 690.0) & (original description: Putative cfm6, Description = Putative CRM domain-containing protein, chloroplastic, PFAM = PF01985)' T '35.2' 'not assigned.unknown' 'niben101scf10305_214322-216783' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10305_215711-218183' ' no hits & (original description: Putative , Description = , PFAM = PF05514)' T '35.2' 'not assigned.unknown' 'niben101scf10306_22626-28034' '(at5g26160 : 451.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G20610.1); Has 197 Blast hits to 158 proteins in 44 species: Archae - 0; Bacteria - 14; Metazoa - 28; Fungi - 15; Plants - 117; Viruses - 2; Other Eukaryotes - 21 (source: NCBI BLink). & (reliability: 902.0) & (original description: Putative PMIR1, Description = Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1, PFAM = PF10358)' T '35.2' 'not assigned.unknown' 'niben101scf10314_342666-345232' '(at3g12345 : 119.0) unknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative At3g12345, Description = FKBP-type peptidyl-prolyl cis-trans isomerase, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10322_34570-44590' '(at1g14180 : 223.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G18260.1); Has 163 Blast hits to 162 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 1; Plants - 160; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative Os10g0406200, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10322_69446-75107' ' (original description: Putative F383_04122, Description = DNA ligase 4, PFAM = PF04667)' T '35.2' 'not assigned.unknown' 'niben101scf10329_388615-391064' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10333_51415-54086' ' no hits & (original description: Putative PGSC0003DMG400007828, Description = , PFAM = PF13639;PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf10333_56484-58882' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10342_100491-104533' ' (original description: Putative SAR1, Description = Synaptobrevin-like protein, PFAM = PF00957;PF00254)' T '35.2' 'not assigned.unknown' 'niben101scf10342_210745-213278' ' (original description: Putative gip1, Description = Gibberellin-regulated family protein, PFAM = PF02704)' T '35.2' 'not assigned.unknown' 'niben101scf10344_163180-166922' '(at3g23160 : 258.0) Protein of unknown function (DUF668); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700), Protein of unknown function DUF3475 (InterPro:IPR021864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT5G04550.1); Has 431 Blast hits to 290 proteins in 19 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 424; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|68572 : 116.0) no description available & (reliability: 516.0) & (original description: Putative TCM_022418, Description = Uncharacterized protein isoform 1, PFAM = PF05003;PF11961)' T '35.2' 'not assigned.unknown' 'niben101scf10369_94573-116311' '(gnl|cdd|72603 : 189.0) no description available & (at3g22680 : 176.0) Encodes RNA-DIRECTED DNA METHYLATION 1 (RDM1), forming a complex with DMS3 (AT3G49250) and DRD1 (AT2G16390). This complex is termed DDR. The DDR complex is required for polymerase V transcripts and RNA-directed DNA methylation.; RNA-DIRECTED DNA METHYLATION 1 (RDM1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1950 (InterPro:IPR015270); Has 26 Blast hits to 26 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative RDM1, Description = Protein RDM1, PFAM = PF09187)' T '35.2' 'not assigned.unknown' 'niben101scf10369_230402-234265' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10375_114432-152733' '(at1g67080 : 213.0) Encodes a protein involved in the photoprotection of PSII. An aba4-1 mutant completely lacks neoxanthin,a component of the chromophore of the peripheral antenna system in PSII. ABA4 is required for neoxanthin biosynthesis, an intermediary step in abscisic acid biosynthesis, but no catalytic activity has been detected for the ABA4 protein.; abscisic acid (ABA)-deficient 4 (ABA4); INVOLVED IN: abscisic acid biosynthetic process, regulation of superoxide anion generation, xanthophyll metabolic process, photoprotection; LOCATED IN: PSII associated light-harvesting complex II, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 723 Blast hits to 723 proteins in 64 species: Archae - 0; Bacteria - 78; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 587 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative ABA4, Description = Protein ABA DEFICIENT 4, chloroplastic, PFAM = PF14108)' T '35.2' 'not assigned.unknown' 'niben101scf10375_152734-156816' ' (original description: Putative murB, Description = UDP-N-acetylenolpyruvoylglucosamine reductase, PFAM = PF01565;PF02873)' T '35.2' 'not assigned.unknown' 'niben101scf10381_230563-245161' '(at1g79150 : 527.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding factor (InterPro:IPR005612), Armadillo-type fold (InterPro:IPR016024), Nucleolar complex-associated (InterPro:IPR011501); Has 3184 Blast hits to 2630 proteins in 361 species: Archae - 21; Bacteria - 280; Metazoa - 1055; Fungi - 428; Plants - 179; Viruses - 26; Other Eukaryotes - 1195 (source: NCBI BLink). & (gnl|cdd|37364 : 284.0) no description available & (gnl|cdd|34719 : 152.0) no description available & (reliability: 1054.0) & (original description: Putative MTR_7g070240, Description = Nucleolar complex-associated protein, PFAM = PF07540)' T '35.2' 'not assigned.unknown' 'niben101scf10381_230813-246819' '(at1g79150 : 769.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding factor (InterPro:IPR005612), Armadillo-type fold (InterPro:IPR016024), Nucleolar complex-associated (InterPro:IPR011501); Has 3184 Blast hits to 2630 proteins in 361 species: Archae - 21; Bacteria - 280; Metazoa - 1055; Fungi - 428; Plants - 179; Viruses - 26; Other Eukaryotes - 1195 (source: NCBI BLink). & (gnl|cdd|37364 : 306.0) no description available & (gnl|cdd|34719 : 184.0) no description available & (reliability: 1538.0) & (original description: Putative BnaC06g39540D, Description = BnaC06g39540D protein, PFAM = PF07540;PF03914)' T '35.2' 'not assigned.unknown' 'niben101scf10384_142280-146801' '(at5g59020 : 243.0) Protein of unknown function (DUF3527); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3527 (InterPro:IPR021916); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3527) (TAIR:AT2G29510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative , Description = , PFAM = PF12043;PF12043)' T '35.2' 'not assigned.unknown' 'niben101scf10384_183079-188515' '(at5g58990 : 139.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative BnaC09g34310D, Description = BnaC09g34310D protein, PFAM = PF16053)' T '35.2' 'not assigned.unknown' 'niben101scf10385_79391-82080' '(at3g03210 : 228.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 59 Blast hits to 59 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative At3g03210, Description = At3g03210, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10388_12253-17425' ' no hits & (original description: Putative , Description = , PFAM = PF14826)' T '35.2' 'not assigned.unknown' 'niben101scf10388_109361-130609' '(at3g09430 : 245.0) unknown protein; Has 17 Blast hits to 17 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 490.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10389_51876-55022' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10389_97388-101669' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10409_1026-3695' ' no hits & (original description: Putative , Description = , PFAM = PF17181)' T '35.2' 'not assigned.unknown' 'niben101scf10409_9802-16080' '(at4g32330 : 137.0) TPX2 (targeting protein for Xklp2) protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT2G25480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative F4I4, Description = TPX2, C-terminal domain-containing protein, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'niben101scf10412_119341-151664' '(at1g47550 : 1470.0) Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.; exocyst complex component sec3A (SEC3A); INVOLVED IN: biological_process unknown; LOCATED IN: exocyst; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Exocyst complex, component Exoc1 (InterPro:IPR019160); BEST Arabidopsis thaliana protein match is: exocyst complex component sec3B (TAIR:AT1G47560.1). & (gnl|cdd|37359 : 966.0) no description available & (reliability: 2940.0) & (original description: Putative SEC3A, Description = Exocyst complex component SEC3A, PFAM = PF15277;PF09763;PF09763)' T '35.2' 'not assigned.unknown' 'niben101scf10412_205179-213057' '(at1g47640 : 387.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2053, membrane (InterPro:IPR019164); Has 204 Blast hits to 204 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (gnl|cdd|38446 : 268.0) no description available & (reliability: 774.0) & (original description: Putative Sb01g007040, Description = Putative uncharacterized protein Sb01g007040, PFAM = PF09767)' T '35.2' 'not assigned.unknown' 'niben101scf10423_121490-125893' '(at5g35320 : 102.0) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10434_121772-128342' '(at5g64470 : 395.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 13 (TAIR:AT2G14530.1). & (reliability: 790.0) & (original description: Putative TBL12, Description = Gb:AAD15463.1 isoform 1, PFAM = PF13839;PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf10434_131633-134988' '(at5g64480 : 105.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10436_69526-72140' ' no hits & (original description: Putative At4g07850, Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10436_269190-278773' ' no hits & (original description: Putative , Description = , PFAM = PF06839)' T '35.2' 'not assigned.unknown' 'niben101scf10438_159431-162532' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10438_307622-312674' '(at5g47740 : 153.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT2G45910.1). & (gnl|cdd|30176 : 87.6) no description available & (reliability: 306.0) & (original description: Putative BnaC02g33490D, Description = BnaC02g33490D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10448_28188-30493' '(at3g59840 : 107.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 72 Blast hits to 72 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative Sb09g024670, Description = Putative uncharacterized protein Sb09g024670, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10448_119326-126857' '(at5g46560 : 278.0) CONTAINS InterPro DOMAIN/s: Inner nuclear membrane protein MAN1 (InterPro:IPR018996); Has 58 Blast hits to 58 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 11; Fungi - 15; Plants - 20; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 556.0) & (original description: Putative PGSC0003DMG400024215, Description = Man1-Src1p-carboxy-terminal domain protein, PFAM = PF09402)' T '35.2' 'not assigned.unknown' 'niben101scf10450_1-1821' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10465_26403-41423' '(at1g02960 : 106.0) unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02965.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10465_30879-33274' ' no hits & (original description: Putative , Description = , PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf10465_230317-233428' ' no hits & (original description: Putative PGSC0003DMG400011365, Description = Zinc finger protein MAGPIE, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10476_152420-159842' '(at2g44640 : 471.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plasma membrane, plastid, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3769 (InterPro:IPR022244); BEST Arabidopsis thaliana protein match is: pigment defective 320 (TAIR:AT3G06960.1); Has 49 Blast hits to 48 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 942.0) & (original description: Putative At2g44640, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10482_197653-203429' '(at2g02590 : 284.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Putative small multi-drug export (InterPro:IPR009577); Has 405 Blast hits to 405 proteins in 185 species: Archae - 65; Bacteria - 295; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (gnl|cdd|70176 : 139.0) no description available & (reliability: 568.0) & (original description: Putative BnaA09g19100D, Description = BnaA09g19100D protein, PFAM = PF06695)' T '35.2' 'not assigned.unknown' 'niben101scf10498_15714-21367' '(at5g19855 : 218.0) Chaperonin-like RbcX protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin-like RbcX (InterPro:IPR003435); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 436.0) & (original description: Putative At5g19855, Description = Chaperonin-like RbcX protein, PFAM = PF02341)' T '35.2' 'not assigned.unknown' 'niben101scf10498_165264-171654' '(at2g01870 : 93.2) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 11 Blast hits to 11 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 186.4) & (original description: Putative PGSC0003DMG400033336, Description = Protoheme IX farnesyltransferase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10502_177418-179828' '(at5g63690 : 187.0) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); Has 222 Blast hits to 217 proteins in 77 species: Archae - 8; Bacteria - 0; Metazoa - 154; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|38626 : 130.0) no description available & (reliability: 374.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10524_4066-8675' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10524_251851-253700' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10524_317966-322752' ' no hits & (original description: Putative PGSC0003DMG400011322, Description = Uveal autoantigen with coiled-coil domains and ankyrin repeats isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10524_458759-461076' ' no hits & (original description: Putative DIR1, Description = Defective in induced resistance 1 protein, PFAM = PF14368)' T '35.2' 'not assigned.unknown' 'niben101scf10524_551191-553508' '(at5g10625 : 137.0) BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative RAA1, Description = Flowering-promoting factor 1-like protein 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10524_663420-666022' ' no hits & (original description: Putative str246N, Description = RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10528_197328-198887' '(at1g44414 : 139.0) unknown protein; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative , Description = , PFAM = PF17032)' T '35.2' 'not assigned.unknown' 'niben101scf10542_54545-62157' '(at2g46980 : 145.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown. & (reliability: 290.0) & (original description: Putative PGSC0003DMG400001122, Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10545_102210-104787' ' (original description: Putative LEA5, Description = Late embryogenesis abundant protein 5, PFAM = PF03242)' T '35.2' 'not assigned.unknown' 'niben101scf10545_110415-112942' '(at1g02816 : 190.0) Protein of unknown function, DUF538; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT4G02370.1); Has 559 Blast hits to 558 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 558; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|86647 : 143.0) no description available & (reliability: 380.0) & (original description: Putative BnaC08g45960D, Description = BnaC08g45960D protein, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben101scf10557_139136-141836' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10559_28111-290285' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10559_212539-273253' ' (original description: Putative LgRT26, Description = Reverse transcriptases, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf10560_20780-30697' '(at5g27990 : 108.0) Pre-rRNA-processing protein TSR2, conserved region; CONTAINS InterPro DOMAIN/s: Pre-rRNA-processing protein TSR2, conserved region (InterPro:IPR019398); BEST Arabidopsis thaliana protein match is: Pre-rRNA-processing protein TSR2, conserved region (TAIR:AT3G22510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39235 : 80.8) no description available & (reliability: 216.0) & (original description: Putative Os08g0508600, Description = Os08g0508600 protein, PFAM = PF10273)' T '35.2' 'not assigned.unknown' 'niben101scf10575_231601-233909' ' no hits & (original description: Putative DIR2, Description = Defective in induced resistance 2 protein, PFAM = PF14368)' T '35.2' 'not assigned.unknown' 'niben101scf10579_28151-31981' '(at5g50100 : 233.0) Putative thiol-disulphide oxidoreductase DCC; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin-like fold (InterPro:IPR012336), Putative thiol-disulphide oxidoreductase DCC (InterPro:IPR007263); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative BC008_16980, Description = Thiol-disulfide oxidoreductase, PFAM = PF04134)' T '35.2' 'not assigned.unknown' 'niben101scf10579_107022-110058' '(at1g60010 : 120.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10530.1); Has 185 Blast hits to 185 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 180; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative , Description = Serine/threonine-protein kinase TAO3, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf10613_73673-76174' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10616_71202-75904' '(at5g39210 : 114.0) Encodes a protein of the chloroplastic NAD(P)H dehydrogenase complex (NDH Complex) involved in respiration, photosystem I (PSI) cyclic electron transport and CO2 uptake. The product of this gene appears to be essential for the stable formation of the NDH Complex.; CHLORORESPIRATORY REDUCTION 7 (CRR7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: NAD(P)H dehydrogenase complex assembly; LOCATED IN: chloroplast, NAD(P)H dehydrogenase complex (plastoquinone), membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3571 (InterPro:IPR021954); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative Sb03g035380, Description = Putative uncharacterized protein Sb03g035380, PFAM = PF12095)' T '35.2' 'not assigned.unknown' 'niben101scf10620_21792-32384' ' no hits & (original description: Putative glysoja_030340, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF13976)' T '35.2' 'not assigned.unknown' 'niben101scf10627_9498-302222' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10627_171006-180960' '(at2g06040 : 423.0) CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT5G21900.1); Has 5028 Blast hits to 2547 proteins in 240 species: Archae - 0; Bacteria - 125; Metazoa - 2326; Fungi - 765; Plants - 1373; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink). & (gnl|cdd|37158 : 97.1) no description available & (reliability: 846.0) & (original description: Putative , Description = DNA repair protein rhp7, putative, PFAM = PF13516;PF13516)' T '35.2' 'not assigned.unknown' 'niben101scf10627_179971-182303' ' no hits & (original description: Putative PGSC0003DMG400045083, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10635_249575-251976' ' no hits & (original description: Putative def7, Description = Defensin, PFAM = PF00304)' T '35.2' 'not assigned.unknown' 'niben101scf10635_274274-294176' '(at2g01690 : 1006.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), Protein of unknown function DUF3434 (InterPro:IPR021841), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35433 : 742.0) no description available & (reliability: 2012.0) & (original description: Putative v1g175927, Description = Predicted protein, PFAM = PF12755;PF11916)' T '35.2' 'not assigned.unknown' 'niben101scf10636_116894-120221' '(at3g05410 : 342.0) Photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: oxygen evolving complex, extrinsic to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: PsbP-like protein 1 (TAIR:AT3G55330.1); Has 355 Blast hits to 355 proteins in 83 species: Archae - 0; Bacteria - 114; Metazoa - 0; Fungi - 0; Plants - 146; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (reliability: 684.0) & (original description: Putative PPD7, Description = PsbP domain-containing protein 7, chloroplastic, PFAM = PF01789)' T '35.2' 'not assigned.unknown' 'niben101scf10650_133317-142081' '(at3g21360 : 332.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Taurine catabolism dioxygenase TauD/TfdA (InterPro:IPR003819); Has 1029 Blast hits to 1021 proteins in 229 species: Archae - 0; Bacteria - 729; Metazoa - 46; Fungi - 17; Plants - 110; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (reliability: 664.0) & (original description: Putative SmABCB24, Description = Taurine catabolism dioxygenase TauD/TfdA, PFAM = PF02668)' T '35.2' 'not assigned.unknown' 'niben101scf10676_71231-80989' '(at3g07310 : 320.0) Protein of unknown function (DUF760); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF760 (InterPro:IPR008479); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF760) (TAIR:AT5G48590.1); Has 147 Blast hits to 143 proteins in 27 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|69084 : 316.0) no description available & (reliability: 640.0) & (original description: Putative F383_25220, Description = Phosphoserine aminotransferase, PFAM = PF05542)' T '35.2' 'not assigned.unknown' 'niben101scf10676_282245-285687' ' no hits & (original description: Putative MTR_7g052690, Description = 3-demethylubiquinone-9 3-methyltransferase domain protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10688_35028-42767' '(at3g15810 : 138.0) Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT1G80120.1); Has 436 Blast hits to 435 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 7; Plants - 429; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86676 : 103.0) no description available & (reliability: 276.0) & (original description: Putative At1g80120, Description = Protein LURP-one-related 12, PFAM = PF04525)' T '35.2' 'not assigned.unknown' 'niben101scf10708_264323-267919' '(at4g33590 : 426.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G33600.1); Has 126 Blast hits to 126 proteins in 35 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 21; Plants - 62; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (reliability: 852.0) & (original description: Putative BnaA08g11520D, Description = BnaA08g11520D protein, PFAM = PF04577)' T '35.2' 'not assigned.unknown' 'niben101scf10735_13628-33405' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10735_39523-42781' ' (original description: Putative pr10, Description = Pathogenesis-related protein PR10, PFAM = PF00407)' T '35.2' 'not assigned.unknown' 'niben101scf10735_64330-67415' ' (original description: Putative pr10, Description = Pathogenesis-related protein PR10, PFAM = PF00407)' T '35.2' 'not assigned.unknown' 'niben101scf10737_90978-93472' '(at4g02370 : 146.0) Protein of unknown function, DUF538; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT1G02816.1); Has 618 Blast hits to 617 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 617; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|86647 : 129.0) no description available & (reliability: 292.0) & (original description: Putative BnaAnng20780D, Description = BnaAnng20780D protein, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben101scf10737_129709-132236' '(at1g02816 : 186.0) Protein of unknown function, DUF538; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT4G02370.1); Has 559 Blast hits to 558 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 558; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|86647 : 141.0) no description available & (reliability: 372.0) & (original description: Putative BnaC02g28130D, Description = BnaC02g28130D protein, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben101scf10743_165908-168774' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10747_58828-61751' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10749_67393-94857' ' no hits & (original description: Putative PGSC0003DMG400029288, Description = Putative ovule protein, PFAM = PF03980)' T '35.2' 'not assigned.unknown' 'niben101scf10749_127378-133443' '(at5g28910 : 699.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28960.1); Has 82 Blast hits to 80 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 1398.0) & (original description: Putative BnaC07g27370D, Description = BnaC07g27370D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10763_84342-90016' '(at5g53800 : 197.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative BnaC09g30210D, Description = AT5g53800/MGN6_19, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10767_74647-76787' ' no hits & (original description: Putative DVL6, Description = DVL6, PFAM = PF08137)' T '35.2' 'not assigned.unknown' 'niben101scf10768_11421-15490' '(at4g25030 : 330.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G45410.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 660.0) & (original description: Putative PGSC0003DMG400030874, Description = AT4G25030 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10785_50355-58885' '(at5g47900 : 523.0) Protein of unknown function (DUF1624); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1624 (InterPro:IPR012429); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1624) (TAIR:AT5G27730.1). & (gnl|cdd|39881 : 404.0) no description available & (gnl|cdd|34021 : 119.0) no description available & (reliability: 1046.0) & (original description: Putative BnaA06g30530D, Description = BnaA06g30530D protein, PFAM = PF07786)' T '35.2' 'not assigned.unknown' 'niben101scf10785_98757-106240' '(at1g44960 : 282.0) SNARE associated Golgi protein family; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); Has 1433 Blast hits to 1432 proteins in 513 species: Archae - 4; Bacteria - 1059; Metazoa - 2; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 221 (source: NCBI BLink). & (gnl|cdd|38350 : 101.0) no description available & (gnl|cdd|87885 : 81.7) no description available & (reliability: 564.0) & (original description: Putative Sb05g020360, Description = Putative uncharacterized protein Sb05g020360, PFAM = PF09335)' T '35.2' 'not assigned.unknown' 'niben101scf10798_103465-106063' ' no hits & (original description: Putative TCM_003181, Description = Defensin-like family protein, putative, PFAM = PF10868)' T '35.2' 'not assigned.unknown' 'niben101scf10798_192412-197530' ' no hits & (original description: Putative , Description = , PFAM = PF02298)' T '35.2' 'not assigned.unknown' 'niben101scf10798_232515-234721' ' no hits & (original description: Putative , Description = Protein rough sheath 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10807_153662-157066' ' no hits & (original description: Putative MK16B, Description = MK16B, PFAM = PF04874)' T '35.2' 'not assigned.unknown' 'niben101scf10811_134239-136577' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10814_116147-118686' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10818_3240-8604' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10835_24359-29915' '(at3g50910 : 265.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66480.1); Has 76 Blast hits to 75 proteins in 28 species: Archae - 0; Bacteria - 10; Metazoa - 7; Fungi - 2; Plants - 49; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 530.0) & (original description: Putative At3g50910, Description = AT3g50910/F18B3_190, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10840_105807-109261' '(at1g64080 : 127.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52870.1); Has 1546 Blast hits to 738 proteins in 176 species: Archae - 0; Bacteria - 143; Metazoa - 278; Fungi - 131; Plants - 95; Viruses - 4; Other Eukaryotes - 895 (source: NCBI BLink). & (reliability: 254.0) & (original description: Putative MAKR2, Description = Probable membrane-associated kinase regulator 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10855_375178-379068' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10900_44248-47250' '(gnl|cdd|86752 : 130.0) no description available & (at3g52900 : 117.0) Family of unknown function (DUF662) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF662 (InterPro:IPR007033); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF662) (TAIR:AT2G36355.1); Has 299 Blast hits to 297 proteins in 71 species: Archae - 2; Bacteria - 15; Metazoa - 102; Fungi - 2; Plants - 124; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative ATIPT2, Description = Golgin, RAB6-interacting, PFAM = PF04949)' T '35.2' 'not assigned.unknown' 'niben101scf10900_60472-67362' '(at3g22430 : 113.0) CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380); BEST Arabidopsis thaliana protein match is: XS domain-containing protein / XS zinc finger domain-containing protein-related (TAIR:AT5G23570.1); Has 565 Blast hits to 510 proteins in 121 species: Archae - 2; Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51; Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative PGSC0003DMG400019495, Description = Putative ovule protein, PFAM = PF03468)' T '35.2' 'not assigned.unknown' 'niben101scf10900_227705-235333' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf10902_118283-124835' '(at5g27390 : 246.0) Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124); Has 23 Blast hits to 23 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative PPD8, Description = Photosystem II reaction center PsbP family protein, PFAM = PF01789)' T '35.2' 'not assigned.unknown' 'niben101scf10910_106420-110877' ' no hits & (original description: Putative PGSC0003DMG402009319, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf10918_29280-32933' ' no hits & (original description: Putative EFTS, Description = CRIB domain-containing protein RIC1, PFAM = PF00786)' T '35.2' 'not assigned.unknown' 'niben101scf10920_118806-123980' '(at5g06560 : 462.0) Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT3G11850.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68159 : 120.0) no description available & (reliability: 924.0) & (original description: Putative MYOB7, Description = Myosin-binding protein 7, PFAM = PF04576)' T '35.2' 'not assigned.unknown' 'niben101scf10940_477803-494381' '(at1g04200 : 774.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dymeclin (InterPro:IPR019142); Has 395 Blast hits to 389 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 262; Fungi - 21; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (gnl|cdd|37436 : 310.0) no description available & (reliability: 1548.0) & (original description: Putative dym, Description = Dymeclin, PFAM = PF09742)' T '35.2' 'not assigned.unknown' 'niben101scf10950_41076-53492' '(at2g31580 : 592.0) tRNAHis guanylyltransferase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: tRNAHis guanylyltransferase (InterPro:IPR007537); BEST Arabidopsis thaliana protein match is: tRNAHis guanylyltransferase (TAIR:AT2G32320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37932 : 306.0) no description available & (gnl|cdd|68035 : 242.0) no description available & (reliability: 1184.0) & (original description: Putative THG2, Description = tRNA(His) guanylyltransferase 2, PFAM = PF14413;PF14413;PF04446;PF04446)' T '35.2' 'not assigned.unknown' 'niben101scf10986_55650-58132' '(at4g12970 : 85.5) Encodes a cysteine-rich peptide, a secretory factor that is produced in the mesophyll cells and acts on the epidermis to increase stomatal formation. Its mature form is a 45-aa peptide with three intramolecular disulfide bonds. It is proposed that STOMAGEN increases stomatal number by competing with two negative regulators of stomatal density, EPF1 and EPF2, possibly through direct interaction with the receptor-like protein TMM.; STOMAGEN (STOMAGEN); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: stomatal complex patterning, regulation of stomatal complex development, positive regulation of stomatal complex development, cell-cell signaling; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; Has 29 Blast hits to 29 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative EPFL9, Description = EPIDERMAL PATTERNING FACTOR-like protein 9, PFAM = PF16851)' T '35.2' 'not assigned.unknown' 'niben101scf10991_27863-34863' '(at2g40550 : 611.0) Encodes a nuclear localized target of E2Fa-DPa, transcription factors controlling cell cycle progression. Required for sister chromatid cohesion and DNA repair.; E2F target gene 1 (ETG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: sister chromatid cohesion, postreplication repair, DNA replication; LOCATED IN: nuclear replisome, nucleus, chloroplast envelope, MCM complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2044, membrane (InterPro:IPR019140); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37756 : 458.0) no description available & (reliability: 1222.0) & (original description: Putative ETG1, Description = Mini-chromosome maintenance complex-binding protein, PFAM = PF09739)' T '35.2' 'not assigned.unknown' 'niben101scf11004_1567-3948' '(at1g21790 : 292.0) TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); Has 174 Blast hits to 174 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 105; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|39675 : 138.0) no description available & (reliability: 584.0) & (original description: Putative BnaC05g17150D, Description = BnaC05g17150D protein, PFAM = PF03798)' T '35.2' 'not assigned.unknown' 'niben101scf11004_3949-8232' '(at3g06035 : 207.0) Glycoprotein membrane precursor GPI-anchored; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Glycoprotein membrane precursor GPI-anchored (TAIR:AT5G19250.1); Has 86 Blast hits to 85 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 414.0) & (original description: Putative At5g19250, Description = Uncharacterized GPI-anchored protein At5g19250, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11019_124761-138315' '(at3g10650 : 212.0) BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast hits to 31782 proteins in 2093 species: Archae - 202; Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants - 1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI BLink). & (reliability: 424.0) & (original description: Putative PGSC0003DMG400023499, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11025_32037-34519' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf11037_151172-156988' '(at4g02800 : 195.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01970.1); Has 3209 Blast hits to 2720 proteins in 308 species: Archae - 13; Bacteria - 213; Metazoa - 1207; Fungi - 247; Plants - 183; Viruses - 21; Other Eukaryotes - 1325 (source: NCBI BLink). & (reliability: 390.0) & (original description: Putative BnaC03g30600D, Description = BnaC03g30600D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11061_1-3260' ' no hits & (original description: Putative , Description = , PFAM = PF05617)' T '35.2' 'not assigned.unknown' 'niben101scf11072_34778-40820' '(at2g35880 : 120.0) TPX2 (targeting protein for Xklp2) protein family; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT4G32330.3); Has 16554 Blast hits to 10282 proteins in 807 species: Archae - 18; Bacteria - 1410; Metazoa - 6904; Fungi - 1967; Plants - 895; Viruses - 63; Other Eukaryotes - 5297 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative F4I4, Description = TPX2, C-terminal domain-containing protein, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'niben101scf11091_51989-58225' '(at2g20760 : 157.0) Clathrin light chain protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin light chain (InterPro:IPR000996); BEST Arabidopsis thaliana protein match is: Clathrin light chain protein (TAIR:AT2G40060.1); Has 1791 Blast hits to 1279 proteins in 282 species: Archae - 0; Bacteria - 563; Metazoa - 557; Fungi - 96; Plants - 161; Viruses - 0; Other Eukaryotes - 414 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative At2g20760, Description = Clathrin light chain 1, PFAM = PF01086)' T '35.2' 'not assigned.unknown' 'niben101scf11107_49994-53192' '(at5g66230 : 141.0) Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1). & (reliability: 282.0) & (original description: Putative At5g66230, Description = At5g66230, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11108_301137-304411' '(at1g54200 : 95.1) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13980.1); Has 1084 Blast hits to 581 proteins in 136 species: Archae - 0; Bacteria - 72; Metazoa - 212; Fungi - 78; Plants - 102; Viruses - 0; Other Eukaryotes - 620 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative At3g13980, Description = Protein BIG GRAIN 1-like A, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11108_461305-465163' ' no hits & (original description: Putative ORF40, Description = Putative uncharacterized protein ORF40, PFAM = PF02042)' T '35.2' 'not assigned.unknown' 'niben101scf11108_463769-467322' '(at4g12070 : 137.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 274.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf11110_15299-28677' '(at1g77220 : 717.0) Protein of unknown function (DUF300); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT4G38360.2); Has 852 Blast hits to 850 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 289; Fungi - 195; Plants - 246; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (gnl|cdd|37852 : 303.0) no description available & (gnl|cdd|67249 : 295.0) no description available & (reliability: 1434.0) & (original description: Putative At1g77220, Description = Protein LAZ1 homolog 1, PFAM = PF03619)' T '35.2' 'not assigned.unknown' 'niben101scf11122_52544-58476' '(gnl|cdd|68069 : 177.0) no description available & (at4g25190 : 164.0) Family of unknown function (DUF566) ; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 (InterPro:IPR007573); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) (TAIR:AT4G30710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative glysoja_048783, Description = , PFAM = PF04484)' T '35.2' 'not assigned.unknown' 'niben101scf11124_219409-223954' '(at5g58250 : 135.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2488 (InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative At5g58250, Description = BnaA03g09860D protein, PFAM = PF10674)' T '35.2' 'not assigned.unknown' 'niben101scf11154_71982-75071' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf11161_30927-36490' '(at4g24330 : 508.0) Protein of unknown function (DUF1682); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1682 (InterPro:IPR012879); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1682) (TAIR:AT5G49945.1); Has 377 Blast hits to 366 proteins in 149 species: Archae - 0; Bacteria - 16; Metazoa - 149; Fungi - 92; Plants - 46; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (gnl|cdd|37568 : 367.0) no description available & (gnl|cdd|71383 : 334.0) no description available & (reliability: 1016.0) & (original description: Putative At5g49945, Description = Uncharacterized protein At5g49945, PFAM = PF07946)' T '35.2' 'not assigned.unknown' 'niben101scf11162_242760-252371' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf11178_175231-176880' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf11178_177449-178868' '(q8s8w5|cema_atrbe : 393.0) Chloroplast envelope membrane protein - Atropa belladonna (Belladonna) (Deadly nightshade) & (gnl|cdd|79261 : 369.0) no description available & (atcg00530 : 319.0) hypothetical protein; YCF10; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CemA (InterPro:IPR004282); BEST Arabidopsis thaliana protein match is: CemA-like proton extrusion protein-related (TAIR:AT4G31040.1). & (reliability: 638.0) & (original description: Putative cemA, Description = Chloroplast envelope membrane protein, PFAM = PF03040)' T '35.2' 'not assigned.unknown' 'niben101scf11178_180376-181173' ' no hits & (original description: Putative , Description = HIP116 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11178_293411-295790' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf11182_70420-73372' ' no hits & (original description: Putative , Description = , PFAM = PF12776)' T '35.2' 'not assigned.unknown' 'niben101scf11188_53516-55100' ' no hits & (original description: Putative PGSC0003DMG400024854, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11188_55101-57471' '(at1g31130 : 120.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 246 Blast hits to 244 proteins in 29 species: Archae - 2; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 222; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 240.0) & (original description: Putative ORF, Description = Putative uncharacterized protein ORF, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11214_45780-54344' '(at1g15860 : 262.0) INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12760.1). & (gnl|cdd|38287 : 141.0) no description available & (gnl|cdd|86365 : 113.0) no description available & (reliability: 524.0) & (original description: Putative At1g15860, Description = Defective in cullin neddylation protein, PFAM = PF03556)' T '35.2' 'not assigned.unknown' 'niben101scf11224_82609-85178' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf11224_205479-209894' '(at5g53900 : 427.0) Serine/threonine-protein kinase WNK (With No Lysine)-related; BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase WNK (With No Lysine)-related (TAIR:AT3G15240.2); Has 207 Blast hits to 205 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 854.0) & (original description: Putative WNK1, Description = Putative serine/threonine-protein kinase WNK (With no lysine)-related protein 1, PFAM = PF14215;PF14215)' T '35.2' 'not assigned.unknown' 'niben101scf11235_98719-101109' ' no hits & (original description: Putative At5g58375, Description = At5g58375, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11235_367873-370560' '(at2g30395 : 114.0) Member of the plant specific ovate protein family of unknown function.; ovate family protein 17 (OFP17); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06923.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 228.0) & (original description: Putative OFP17, Description = Transcription repressor OFP17, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11245_46938-53900' '(at5g09960 : 102.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative At5g09960, Description = At5g09960, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11254_71240-77361' '(at5g02770 : 94.0) unknown protein; Has 469 Blast hits to 336 proteins in 126 species: Archae - 0; Bacteria - 54; Metazoa - 249; Fungi - 22; Plants - 47; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 188.0) & (original description: Putative MOS11, Description = SAP domain-containing ribonucleoprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11264_172835-176206' '(at4g29850 : 149.0) Eukaryotic protein of unknown function (DUF872); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0414, transmembrane (InterPro:IPR008590); BEST Arabidopsis thaliana protein match is: Eukaryotic protein of unknown function (DUF872) (TAIR:AT2G19350.1); Has 271 Blast hits to 271 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 167; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|39950 : 114.0) no description available & (reliability: 298.0) & (original description: Putative BnaA03g49810D, Description = BnaA03g49810D protein, PFAM = PF05915)' T '35.2' 'not assigned.unknown' 'niben101scf11264_249754-253103' '(at3g02645 : 161.0) Plant protein of unknown function (DUF247); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50150.1). & (reliability: 322.0) & (original description: Putative PGSC0003DMG400018746, Description = , PFAM = PF03140)' T '35.2' 'not assigned.unknown' 'niben101scf11291_71854-81006' '(at2g25280 : 451.0) CONTAINS InterPro DOMAIN/s: UPF0103/Mediator of ErbB2-driven cell motility (Memo), related (InterPro:IPR002737); Has 1074 Blast hits to 1072 proteins in 474 species: Archae - 213; Bacteria - 366; Metazoa - 159; Fungi - 135; Plants - 54; Viruses - 0; Other Eukaryotes - 147 (source: NCBI BLink). & (gnl|cdd|38296 : 430.0) no description available & (gnl|cdd|85736 : 237.0) no description available & (reliability: 902.0) & (original description: Putative memo1, Description = Protein MEMO1, PFAM = PF01875)' T '35.2' 'not assigned.unknown' 'niben101scf11299_156167-158640' ' no hits & (original description: Putative PGSC0003DMG400020123, Description = Protease inhibitor/seed storage/LTP family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11303_5966-8883' '(at1g23710 : 118.0) Protein of unknown function (DUF1645); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT1G70420.1); Has 288 Blast hits to 282 proteins in 52 species: Archae - 0; Bacteria - 6; Metazoa - 16; Fungi - 11; Plants - 191; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|71256 : 87.1) no description available & (reliability: 236.0) & (original description: Putative , Description = , PFAM = PF07816)' T '35.2' 'not assigned.unknown' 'niben101scf11303_164350-166703' ' no hits & (original description: Putative PGSC0003DMG400041876, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11303_210621-213298' ' (original description: Putative erf, Description = Ethylene-responsive transcription factor RAP2-11, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'niben101scf11307_27625-34428' '(at2g25310 : 234.0) FUNCTIONS IN: carbohydrate binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate-binding-like fold (InterPro:IPR013784), Protein of unknown function DUF2012 (InterPro:IPR019008); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF2012) (TAIR:AT4G32130.1); Has 307 Blast hits to 307 proteins in 138 species: Archae - 0; Bacteria - 14; Metazoa - 141; Fungi - 68; Plants - 50; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (gnl|cdd|87975 : 144.0) no description available & (gnl|cdd|38516 : 117.0) no description available & (reliability: 468.0) & (original description: Putative At4g32130, Description = ER membrane protein complex subunit 7 homolog, PFAM = PF09430)' T '35.2' 'not assigned.unknown' 'niben101scf11312_188960-195091' '(at1g72480 : 747.0) Lung seven transmembrane receptor family protein; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT2G01070.1); Has 596 Blast hits to 594 proteins in 172 species: Archae - 0; Bacteria - 0; Metazoa - 236; Fungi - 150; Plants - 154; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|37779 : 520.0) no description available & (gnl|cdd|87161 : 357.0) no description available & (reliability: 1494.0) & (original description: Putative BnaA07g30210D, Description = BnaA07g30210D protein, PFAM = PF06814)' T '35.2' 'not assigned.unknown' 'niben101scf11319_101778-106797' '(at1g20460 : 83.6) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76185.1); Has 37 Blast hits to 37 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative BnaC06g21960D, Description = BnaC06g21960D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11334_36546-43424' '(at1g28100 : 335.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 64 Blast hits to 64 proteins in 27 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 6; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 670.0) & (original description: Putative PGSC0003DMG400014477, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11341_95766-98425' ' (original description: Putative erf, Description = Ethylene-responsive transcription factor RAP2-11, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'niben101scf11347_2009-4365' ' no hits & (original description: Putative nad1, Description = NADH-ubiquinone oxidoreductase chain 1, PFAM = PF00146)' T '35.2' 'not assigned.unknown' 'niben101scf11349_94746-97868' '(at4g22600 : 178.0) unknown protein; Has 26 Blast hits to 26 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 356.0) & (original description: Putative PGSC0003DMG400004793, Description = Seed dormancy control protein, PFAM = PF14144)' T '35.2' 'not assigned.unknown' 'niben101scf11355_8594-12171' ' no hits & (original description: Putative , Description = , PFAM = PF00012)' T '35.2' 'not assigned.unknown' 'niben101scf11355_12172-14814' ' no hits & (original description: Putative F16B3.11, Description = AT3g02480/F16B3_11, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11355_42955-71423' '(at5g15900 : 421.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 19 (TBL19); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 21 (TAIR:AT5G15890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|72785 : 114.0) no description available & (reliability: 842.0) & (original description: Putative AXY4L, Description = Leaf senescence protein-like, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf11355_71424-83282' '(at5g15900 : 464.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 19 (TBL19); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 21 (TAIR:AT5G15890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|72785 : 129.0) no description available & (reliability: 928.0) & (original description: Putative TBL19, Description = Protein trichome birefringence-like 19, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf11355_83140-91204' '(at5g15880 : 273.0) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 546.0) & (original description: Putative BnaA03g05750D, Description = BnaA03g05750D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11360_12924-15907' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf11361_159346-162611' '(at2g45260 : 642.0) Plant protein of unknown function (DUF641); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF641) (TAIR:AT4G34080.1); Has 407 Blast hits to 396 proteins in 44 species: Archae - 0; Bacteria - 10; Metazoa - 42; Fungi - 9; Plants - 286; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (gnl|cdd|68434 : 166.0) no description available & (reliability: 1284.0) & (original description: Putative At2g45260, Description = Putative uncharacterized protein At2g45260, PFAM = PF04859)' T '35.2' 'not assigned.unknown' 'niben101scf11361_385840-416747' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf11362_260002-269322' '(at1g28510 : 181.0) Optic atrophy 3 protein (OPA3); CONTAINS InterPro DOMAIN/s: Optic atrophy 3-like (InterPro:IPR010754); BEST Arabidopsis thaliana protein match is: Optic atrophy 3 protein (OPA3) (TAIR:AT3G58150.1); Has 397 Blast hits to 393 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 155; Fungi - 114; Plants - 80; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|70509 : 154.0) no description available & (gnl|cdd|38545 : 141.0) no description available & (reliability: 362.0) & (original description: Putative Sb04g009930, Description = Putative uncharacterized protein Sb04g009930, PFAM = PF07047)' T '35.2' 'not assigned.unknown' 'niben101scf11364_138071-145564' ' no hits & (original description: Putative PGSC0003DMG400004658, Description = Putative DNA ligase 1-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11366_301667-305997' '(at2g28430 : 84.3) unknown protein; Has 28 Blast hits to 28 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative At2g28430, Description = At2g28430/T1B3.5, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11368_94640-113548' '(at1g50120 : 526.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rgp1 (InterPro:IPR014848), Immunoglobulin E-set (InterPro:IPR014756); Has 144 Blast hits to 140 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 86; Fungi - 10; Plants - 39; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 1052.0) & (original description: Putative At1g50120, Description = Putative uncharacterized protein At1g50120, PFAM = PF08737)' T '35.2' 'not assigned.unknown' 'niben101scf11379_69095-75876' '(at5g17660 : 273.0) tRNA (guanine-N-7) methyltransferase; FUNCTIONS IN: tRNA (guanine-N7-)-methyltransferase activity; INVOLVED IN: tRNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA (guanine-N-7) methyltransferase (InterPro:IPR003358); BEST Arabidopsis thaliana protein match is: tRNA (guanine-N-7) methyltransferase (TAIR:AT5G24840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|80529 : 123.0) no description available & (reliability: 546.0) & (original description: Putative trmB, Description = tRNA (Guanine-N-7) methyltransferase, PFAM = PF02390)' T '35.2' 'not assigned.unknown' 'niben101scf11379_106802-111404' '(at5g17670 : 374.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: intracellular protein transport, GPI anchor metabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PGAP1-like (InterPro:IPR012908); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 748.0) & (original description: Putative BnaAnng15970D, Description = BnaAnng15970D protein, PFAM = PF07819)' T '35.2' 'not assigned.unknown' 'niben101scf11383_163582-173128' '(at1g54520 : 337.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1517 (InterPro:IPR010903); Has 276 Blast hits to 275 proteins in 83 species: Archae - 0; Bacteria - 108; Metazoa - 6; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (gnl|cdd|70916 : 319.0) no description available & (reliability: 674.0) & (original description: Putative At1g54520, Description = Putative uncharacterized protein At1g54520, PFAM = PF07466)' T '35.2' 'not assigned.unknown' 'niben101scf11383_204927-246524' '(at3g04890 : 219.0) Uncharacterized conserved protein (DUF2358); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT2G46100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative F383_07323, Description = Adenine phosphoribosyltransferase 1, chloroplastic-like protein, PFAM = PF10184)' T '35.2' 'not assigned.unknown' 'niben101scf11383_368121-371011' '(at5g28150 : 387.0) Plant protein of unknown function (DUF868); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT3G04860.1); Has 292 Blast hits to 290 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 292; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69434 : 325.0) no description available & (reliability: 774.0) & (original description: Putative At4g12690, Description = At4g12690, PFAM = PF05910)' T '35.2' 'not assigned.unknown' 'niben101scf11391_5871-13783' '(at5g20165 : 112.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1242 (InterPro:IPR009653). & (gnl|cdd|87170 : 85.7) no description available & (reliability: 224.0) & (original description: Putative ksh, Description = Protein kish, PFAM = PF06842)' T '35.2' 'not assigned.unknown' 'niben101scf11401_190347-195013' '(at1g26355 : 107.0) SPIRAL1-LIKE1 belongs to a six-member gene family in Arabidopsis; all members share a high sequence similarity in amino- and carboxy-terminal regions. GUS expression was detected only in pollen; however, no endogenous transcript was found.; SPIRAL1-like1 (SP1L1); BEST Arabidopsis thaliana protein match is: SPIRAL1-like2 (TAIR:AT1G69230.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative SP1L1, Description = Protein SPIRAL1-like 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11408_96414-98863' ' no hits & (original description: Putative , Description = , PFAM = PF05617)' T '35.2' 'not assigned.unknown' 'niben101scf11410_86440-89273' ' no hits & (original description: Putative BnaA04g18040D, Description = BnaA04g18040D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11415_36131-51004' '(at5g14550 : 429.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT1G11940.1); Has 576 Blast hits to 576 proteins in 20 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 546; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|86287 : 305.0) no description available & (reliability: 858.0) & (original description: Putative BnaC09g42920D, Description = BnaC09g42920D protein, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben101scf11416_56920-95913' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf11424_16437-19222' ' no hits & (original description: Putative , Description = , PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf11424_31209-32989' '(at5g46090 : 219.0) Protein of unknown function (DUF679); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF679 (InterPro:IPR007770); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF679) (TAIR:AT4G18425.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68643 : 202.0) no description available & (reliability: 438.0) & (original description: Putative BnaA03g49300D, Description = BnaA03g49300D protein, PFAM = PF05078)' T '35.2' 'not assigned.unknown' 'niben101scf11443_277566-282646' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf11446_55867-58439' '(at1g29195 : 130.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 180 Blast hits to 180 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative At1g29195, Description = At1g29190/F28N24_12, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf11447_230892-233248' ' no hits & (original description: Putative psbX, Description = Chloroplast photosystem II subunit X, PFAM = PF06596)' T '35.2' 'not assigned.unknown' 'niben101scf11447_332631-335866' '(at1g54200 : 92.8) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13980.1); Has 1084 Blast hits to 581 proteins in 136 species: Archae - 0; Bacteria - 72; Metazoa - 212; Fungi - 78; Plants - 102; Viruses - 0; Other Eukaryotes - 620 (source: NCBI BLink). & (reliability: 185.6) & (original description: Putative At3g13980, Description = Protein BIG GRAIN 1-like A, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11468_73322-78791' '(at3g56430 : 387.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40800.1); Has 3121 Blast hits to 1477 proteins in 196 species: Archae - 12; Bacteria - 170; Metazoa - 996; Fungi - 324; Plants - 132; Viruses - 59; Other Eukaryotes - 1428 (source: NCBI BLink). & (reliability: 774.0) & (original description: Putative BnaC04g01560D, Description = BnaC04g01560D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11472_166951-169674' ' no hits & (original description: Putative PGSC0003DMG400010618, Description = ZCF37, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11475_107261-109713' ' (original description: Putative Tgt1ORF2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf11480_299986-312618' '(at1g56423 : 239.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 478.0) & (original description: Putative Sb01g037490, Description = Putative uncharacterized protein Sb01g037490, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11484_148937-154369' '(at1g20225 : 225.0) Thioredoxin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G76020.1); Has 208 Blast hits to 204 proteins in 76 species: Archae - 0; Bacteria - 103; Metazoa - 14; Fungi - 6; Plants - 51; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (reliability: 450.0) & (original description: Putative BnaCnng41210D, Description = BnaCnng41210D protein, PFAM = PF13462)' T '35.2' 'not assigned.unknown' 'niben101scf11491_30083-32328' ' no hits & (original description: Putative VQ20, Description = AtVQ20, PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf11491_43256-58240' '(at1g48840 : 879.0) Plant protein of unknown function (DUF639); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF639 (InterPro:IPR006927); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF639) (TAIR:AT3G18350.1); Has 149 Blast hits to 146 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68417 : 738.0) no description available & (reliability: 1758.0) & (original description: Putative At1g48840, Description = Putative uncharacterized protein At1g48840, PFAM = PF04842)' T '35.2' 'not assigned.unknown' 'niben101scf11491_162645-165182' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf11491_227514-232633' '(at1g67060 : 341.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 283 Blast hits to 281 proteins in 136 species: Archae - 0; Bacteria - 145; Metazoa - 0; Fungi - 65; Plants - 41; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 682.0) & (original description: Putative At1g67060, Description = AT1G67060 protein, PFAM = PF13398)' T '35.2' 'not assigned.unknown' 'niben101scf11497_243410-245748' ' no hits & (original description: Putative At5g19875, Description = At5g19875, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11515_150582-153730' ' no hits & (original description: Putative Sb01g029366, Description = Retrotransposon protein, putative, Ty1-copia subclass, PFAM = PF00098)' T '35.2' 'not assigned.unknown' 'niben101scf11531_13587-19681' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf11535_120427-125353' '(gnl|cdd|69613 : 784.0) no description available & (at1g04090 : 699.0) Plant protein of unknown function (DUF946); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF946 (InterPro:IPR009291); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF946) (TAIR:AT5G43950.1); Has 349 Blast hits to 319 proteins in 89 species: Archae - 0; Bacteria - 23; Metazoa - 11; Fungi - 104; Plants - 206; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 1398.0) & (original description: Putative Sb02g037340, Description = Putative uncharacterized protein Sb02g037340, PFAM = PF06101)' T '35.2' 'not assigned.unknown' 'niben101scf11535_136390-139463' ' no hits & (original description: Putative At2g06320, Description = Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11535_147816-150301' ' no hits & (original description: Putative glysoja_007451, Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = PF08284)' T '35.2' 'not assigned.unknown' 'niben101scf11535_213627-220452' '(at5g32470 : 521.0) Haem oxygenase-like, multi-helical; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem oxygenase-like, multi-helical (InterPro:IPR016084), TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C (InterPro:IPR004305); Has 1988 Blast hits to 1985 proteins in 797 species: Archae - 79; Bacteria - 1526; Metazoa - 2; Fungi - 151; Plants - 51; Viruses - 0; Other Eukaryotes - 179 (source: NCBI BLink). & (gnl|cdd|31161 : 106.0) no description available & (reliability: 1042.0) & (original description: Putative PGSC0003DMG400008580, Description = Heme oxygenase-like, multi-helical isoform 1, PFAM = PF03070)' T '35.2' 'not assigned.unknown' 'niben101scf11552_40402-42758' ' no hits & (original description: Putative , Description = Zinc finger containing preotein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11552_511837-513999' '(at2g33855 : 132.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 264.0) & (original description: Putative BnaA04g19880D, Description = BnaA04g19880D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11557_387631-389984' ' no hits & (original description: Putative PGSC0003DMG400028186, Description = SAUR-like auxin-responsive protein family, putative, PFAM = PF02519)' T '35.2' 'not assigned.unknown' 'niben101scf11560_130538-135151' '(at4g35870 : 1084.0) early-responsive to dehydration stress protein (ERD4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein targeting to vacuole; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 901 Blast hits to 753 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 307; Fungi - 164; Plants - 325; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|36349 : 262.0) no description available & (gnl|cdd|35153 : 87.3) no description available & (reliability: 2168.0) & (original description: Putative GFS10, Description = CSC1-like protein At4g35870, PFAM = PF14703;PF13967;PF02714;PF02714)' T '35.2' 'not assigned.unknown' 'niben101scf11566_8875-12056' '(at5g19970 : 266.0) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 532.0) & (original description: Putative Sb03g029480, Description = Putative uncharacterized protein Sb03g029480, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11581_178462-203463' ' no hits & (original description: Putative Rmc, Description = RMC, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11604_143322-145987' ' no hits & (original description: Putative orf261, Description = Orf189, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11609_135291-145588' ' no hits & (original description: Putative , Description = , PFAM = PF14368)' T '35.2' 'not assigned.unknown' 'niben101scf11609_256837-260114' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf11616_118325-122040' '(at3g53400 : 339.0) BEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 47 (TAIR:AT5G03190.1); Has 285 Blast hits to 285 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 279; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 678.0) & (original description: Putative BnaA04g04790D, Description = BnaA04g04790D protein, PFAM = PF08241)' T '35.2' 'not assigned.unknown' 'niben101scf11621_135374-139708' ' no hits & (original description: Putative dhn1, Description = Dehydrin, PFAM = PF00257)' T '35.2' 'not assigned.unknown' 'niben101scf11621_173540-181177' '(at2g01640 : 104.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 208.0) & (original description: Putative , Description = Putative reverse transcriptase, PFAM = PF15341)' T '35.2' 'not assigned.unknown' 'niben101scf11636_76357-87907' '(at4g35987 : 385.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G27400.1); Has 1596 Blast hits to 1596 proteins in 294 species: Archae - 0; Bacteria - 195; Metazoa - 556; Fungi - 317; Plants - 331; Viruses - 0; Other Eukaryotes - 197 (source: NCBI BLink). & (gnl|cdd|38411 : 195.0) no description available & (reliability: 770.0) & (original description: Putative At4g35987, Description = S-adenosyl-L-methionine-dependent methyltransferase domain-containing protein, PFAM = PF10294)' T '35.2' 'not assigned.unknown' 'niben101scf11646_258550-261021' ' no hits & (original description: Putative , Description = Integrase core domain containing protein, PFAM = PF16588)' T '35.2' 'not assigned.unknown' 'niben101scf11646_273730-277077' ' no hits & (original description: Putative , Description = Putative myosin-7-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11649_96082-100058' '(at4g12650 : 1091.0) Endomembrane protein 70 protein family; LOCATED IN: integral to membrane, Golgi apparatus, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G35160.2); Has 1639 Blast hits to 1594 proteins in 317 species: Archae - 0; Bacteria - 7; Metazoa - 635; Fungi - 224; Plants - 501; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink). & (gnl|cdd|36492 : 727.0) no description available & (gnl|cdd|66650 : 539.0) no description available & (reliability: 2182.0) & (original description: Putative TMN12, Description = Transmembrane 9 superfamily member 12, PFAM = PF02990)' T '35.2' 'not assigned.unknown' 'niben101scf11649_102660-114691' '(at5g48310 : 1107.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24610.1). & (reliability: 2214.0) & (original description: Putative BnaC07g26400D, Description = BnaC07g26400D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11653_91822-96599' '(at2g46550 : 226.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01240.3). & (reliability: 452.0) & (original description: Putative BnaA04g27190D, Description = BnaA04g27190D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11653_105505-112143' '(at2g46540 : 83.6) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; Has 42 Blast hits to 42 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 167.2) & (original description: Putative PGSC0003DMG400000233, Description = Fiber protein Fb11, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11670_224847-231145' ' no hits & (original description: Putative PRR9, Description = Pseudo-response regulator 5, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11688_4348-9438' '(at2g39170 : 172.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function NEP (InterPro:IPR019320); Has 57 Blast hits to 57 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|39723 : 143.0) no description available & (reliability: 344.0) & (original description: Putative , Description = , PFAM = PF10167)' T '35.2' 'not assigned.unknown' 'niben101scf11688_76007-79586' '(at1g15370 : 212.0) SNARE-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longin-like (InterPro:IPR011012); Has 91 Blast hits to 91 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 12; Plants - 67; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 424.0) & (original description: Putative pco095958, Description = Longin-like domain-containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11689_35594-42954' '(at2g45900 : 112.0) Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related; BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT3G61380.1); Has 396 Blast hits to 374 proteins in 94 species: Archae - 0; Bacteria - 31; Metazoa - 55; Fungi - 42; Plants - 167; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative , Description = , PFAM = PF12552;PF14309)' T '35.2' 'not assigned.unknown' 'niben101scf11702_23241-28112' '(gnl|cdd|70353 : 375.0) no description available & (at1g13530 : 324.0) Protein of unknown function (DUF1262); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1262 (InterPro:IPR010683); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1262) (TAIR:AT1G13500.1); Has 101 Blast hits to 94 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 648.0) & (original description: Putative , Description = DUF1262 family protein, PFAM = PF06880)' T '35.2' 'not assigned.unknown' 'niben101scf11727_65885-68018' ' no hits & (original description: Putative PGSC0003DMG400006901, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11734_75342-81258' '(at5g24000 : 339.0) Protein of unknown function (DUF819); LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF819 (InterPro:IPR008537); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF819) (TAIR:AT5G52540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|69220 : 152.0) no description available & (reliability: 678.0) & (original description: Putative CPLD14, Description = Similarity to unknown protein, PFAM = PF05684;PF05684)' T '35.2' 'not assigned.unknown' 'niben101scf11734_107344-131156' '(at5g52540 : 475.0) Protein of unknown function (DUF819); LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF819 (InterPro:IPR008537); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF819) (TAIR:AT5G24000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|69220 : 310.0) no description available & (reliability: 950.0) & (original description: Putative CPLD14, Description = Predicted protein, PFAM = PF05684)' T '35.2' 'not assigned.unknown' 'niben101scf11739_24127-54679' '(at5g35180 : 924.0) FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769), Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: ENHANCED DISEASE RESISTANCE 2 (TAIR:AT4G19040.1); Has 454 Blast hits to 426 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 378; Viruses - 2; Other Eukaryotes - 71 (source: NCBI BLink). & (gnl|cdd|70520 : 240.0) no description available & (reliability: 1848.0) & (original description: Putative At5g35180, Description = AT5G35180 protein, PFAM = PF07059;PF01852)' T '35.2' 'not assigned.unknown' 'niben101scf11744_213571-216759' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf11751_56948-59310' ' no hits & (original description: Putative orf129, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11751_89779-95198' '(at2g36835 : 164.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative At2g36835, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11770_179890-183717' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf11774_59498-61992' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf11774_104743-107876' '(at4g16580 : 352.0) Protein phosphatase 2C family protein; FUNCTIONS IN: phosphoprotein phosphatase activity, catalytic activity; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Sporulation stage II, protein E C-terminal (InterPro:IPR010822); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66720.1); Has 838 Blast hits to 828 proteins in 210 species: Archae - 0; Bacteria - 2; Metazoa - 184; Fungi - 235; Plants - 232; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (gnl|cdd|36593 : 288.0) no description available & (reliability: 704.0) & (original description: Putative At4g16580, Description = Mitochondrial catalytic protein, PFAM = PF07228)' T '35.2' 'not assigned.unknown' 'niben101scf11779_53245-56450' '(at5g59500 : 386.0) protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferases; FUNCTIONS IN: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity; INVOLVED IN: C-terminal protein amino acid methylation; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isoprenylcysteine carboxyl methyltransferase (InterPro:IPR007269); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37839 : 137.0) no description available & (reliability: 772.0) & (original description: Putative At5g59500, Description = C-terminal S-isoprenylcysteine carboxyl O-methyltransferase, PFAM = PF04191)' T '35.2' 'not assigned.unknown' 'niben101scf11779_143904-148036' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf11791_14488-16961' '(at4g02370 : 155.0) Protein of unknown function, DUF538; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT1G02816.1); Has 618 Blast hits to 617 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 617; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|86647 : 125.0) no description available & (reliability: 310.0) & (original description: Putative BnaC03g30980D, Description = BnaC03g30980D protein, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben101scf11806_36971-42394' '(at3g04950 : 237.0) CONTAINS InterPro DOMAIN/s: SEC-C motif (InterPro:IPR004027); Has 583 Blast hits to 583 proteins in 248 species: Archae - 0; Bacteria - 488; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 474.0) & (original description: Putative , Description = Predicted protein, PFAM = PF02810)' T '35.2' 'not assigned.unknown' 'niben101scf11806_38242-42156' '(at3g04950 : 228.0) CONTAINS InterPro DOMAIN/s: SEC-C motif (InterPro:IPR004027); Has 583 Blast hits to 583 proteins in 248 species: Archae - 0; Bacteria - 488; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 456.0) & (original description: Putative , Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11813_125941-135358' '(at3g51620 : 475.0) PAP/OAS1 substrate-binding domain superfamily; BEST Arabidopsis thaliana protein match is: nucleotidyltransferases (TAIR:AT3G61690.1); Has 386 Blast hits to 356 proteins in 104 species: Archae - 0; Bacteria - 4; Metazoa - 102; Fungi - 40; Plants - 181; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (gnl|cdd|37117 : 175.0) no description available & (reliability: 950.0) & (original description: Putative pco079591, Description = Nucleotidyltransferase domain containing protein, expressed, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11813_222785-226901' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11813_227788-240618' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf11813_228279-240107' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf11830_15796-24856' ' no hits & (original description: Putative orf107d, Description = ORF61c, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11852_31294-118249' '(at1g77620 : 442.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding; INVOLVED IN: DNA repair, cell cycle; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Checkpoint protein Rad24 (InterPro:IPR004582), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: replication factor C1 (TAIR:AT5G22010.1); Has 1511 Blast hits to 1466 proteins in 328 species: Archae - 281; Bacteria - 0; Metazoa - 363; Fungi - 421; Plants - 133; Viruses - 9; Other Eukaryotes - 304 (source: NCBI BLink). & (gnl|cdd|37179 : 106.0) no description available & (reliability: 884.0) & (original description: Putative BnaCnng11360D, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11856_25723-28145' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf11860_30285-34738' '(at5g58600 : 453.0) Belongs to a large family of plant-specific genes of unknown function. Involved in resistance to the powdery mildew species Erysiphe cichoracearum and Erysiphe orontii, but not to the unrelated pathogens Pseudomonas syringae or Peronospora parasitica. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; POWDERY MILDEW RESISTANT 5 (PMR5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 45 (TAIR:AT2G30010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72785 : 169.0) no description available & (reliability: 906.0) & (original description: Putative PMR5, Description = Protein PMR5, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf11884_57349-61812' '(at1g74830 : 375.0) Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT1G18990.1); Has 3601 Blast hits to 3088 proteins in 462 species: Archae - 26; Bacteria - 544; Metazoa - 962; Fungi - 241; Plants - 560; Viruses - 41; Other Eukaryotes - 1227 (source: NCBI BLink). & (gnl|cdd|68159 : 122.0) no description available & (reliability: 750.0) & (original description: Putative MYOB6, Description = Probable myosin-binding protein 6, PFAM = PF04576)' T '35.2' 'not assigned.unknown' 'niben101scf11886_453728-468002' '(at5g44650 : 193.0) Encodes a chloroplast protein that induces tolerance to multiple environmental stresses and reduces photooxidative damage.; CHLOROPLAST PROTEIN-ENHANCING STRESS TOLERANCE (CEST); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, chloroplast organization, hyperosmotic salinity response, response to photooxidative stress, heat acclimation; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 386.0) & (original description: Putative CEST, Description = OsCEST, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11886_467102-470037' '(at4g20190 : 109.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44660.1); Has 271 Blast hits to 209 proteins in 52 species: Archae - 0; Bacteria - 15; Metazoa - 63; Fungi - 14; Plants - 48; Viruses - 3; Other Eukaryotes - 128 (source: NCBI BLink). & (reliability: 218.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf11891_32302-49709' '(at2g31580 : 669.0) tRNAHis guanylyltransferase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: tRNAHis guanylyltransferase (InterPro:IPR007537); BEST Arabidopsis thaliana protein match is: tRNAHis guanylyltransferase (TAIR:AT2G32320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37932 : 310.0) no description available & (gnl|cdd|68035 : 247.0) no description available & (reliability: 1338.0) & (original description: Putative THG2, Description = tRNA(His) guanylyltransferase 2, PFAM = PF04446;PF04446;PF14413;PF14413)' T '35.2' 'not assigned.unknown' 'niben101scf11891_44593-48290' '(gnl|cdd|37932 : 133.0) no description available & (at2g31580 : 120.0) tRNAHis guanylyltransferase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: tRNAHis guanylyltransferase (InterPro:IPR007537); BEST Arabidopsis thaliana protein match is: tRNAHis guanylyltransferase (TAIR:AT2G32320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68035 : 101.0) no description available & (reliability: 240.0) & (original description: Putative thg1, Description = tRNA(His) guanylyltransferase, PFAM = PF04446;PF14413)' T '35.2' 'not assigned.unknown' 'niben101scf11891_101935-146129' '(at4g39420 : 2988.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; Has 20 Blast hits to 19 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|37095 : 1147.0) no description available & (reliability: 5976.0) & (original description: Putative , Description = , PFAM = PF14649)' T '35.2' 'not assigned.unknown' 'niben101scf11899_7713-11841' '(gnl|cdd|71153 : 515.0) no description available & (at5g61820 : 433.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Stress up-regulated Nod 19 (InterPro:IPR011692); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 866.0) & (original description: Putative MtN19, Description = MtN19 protein, PFAM = PF07712)' T '35.2' 'not assigned.unknown' 'niben101scf11909_13810-27098' '(at1g71360 : 418.0) Galactose-binding protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Sad1/UNC-like, C-terminal (InterPro:IPR012919), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Galactose-binding protein (TAIR:AT1G22882.1); Has 1743 Blast hits to 1314 proteins in 210 species: Archae - 22; Bacteria - 165; Metazoa - 539; Fungi - 114; Plants - 96; Viruses - 20; Other Eukaryotes - 787 (source: NCBI BLink). & (gnl|cdd|36610 : 263.0) no description available & (gnl|cdd|87361 : 120.0) no description available & (reliability: 836.0) & (original description: Putative MPL, Description = Membrane protein-like, PFAM = PF07738)' T '35.2' 'not assigned.unknown' 'niben101scf11915_55331-57969' '(at1g52140 : 134.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative PGSC0003DMG400000363, Description = At4g29110, PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben101scf11922_148873-188059' ' no hits & (original description: Putative PGSC0003DMG402013972, Description = , PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben101scf11922_168542-174184' ' no hits & (original description: Putative PGSC0003DMG402013972, Description = , PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben101scf11937_84964-95919' '(at4g04190 : 268.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative LOC100191324, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11937_237254-247098' '(at3g44600 : 1089.0) Cyclophilin71 is a WD40 domain cyclophilin, which functions in gene repression, organogenesis and meristem development. CYP71 physically interacts with histone H3.; cyclophilin71 (CYP71); CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT2G36130.1); Has 19122 Blast hits to 18688 proteins in 2726 species: Archae - 110; Bacteria - 7959; Metazoa - 3135; Fungi - 1772; Plants - 1406; Viruses - 0; Other Eukaryotes - 4740 (source: NCBI BLink). & (gnl|cdd|36100 : 798.0) no description available & (gnl|cdd|29398 : 293.0) no description available & (p21569|cyph_maize : 135.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Zea mays (Maize) & (reliability: 2178.0) & (original description: Putative CYP71, Description = Peptidyl-prolyl cis-trans isomerase CYP71, PFAM = PF00400;PF00400;PF00160)' T '35.2' 'not assigned.unknown' 'niben101scf11944_63954-67540' ' no hits & (original description: Putative AGG2, Description = Heterotrimeric G-protein gamma subunit 2, PFAM = PF00631)' T '35.2' 'not assigned.unknown' 'niben101scf11944_140320-143129' '(at5g11890 : 115.0) FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G17620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|70773 : 96.1) no description available & (reliability: 230.0) & (original description: Putative BnaA08g23020D, Description = BnaA08g23020D protein, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'niben101scf11952_44474-48382' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf11952_86615-89614' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf11960_280314-283487' '(at4g19370 : 95.1) Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT1G31720.1); Has 77 Blast hits to 77 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative , Description = Putative ovule protein, PFAM = PF06749)' T '35.2' 'not assigned.unknown' 'niben101scf11969_124075-126707' ' no hits & (original description: Putative PGSC0003DMG400023605, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11980_146786-154358' '(at1g71110 : 577.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G12400.1); Has 173 Blast hits to 169 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 165; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 1154.0) & (original description: Putative BnaA07g29140D, Description = BnaA07g29140D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11980_294199-296657' '(at2g01300 : 125.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15010.1); Has 73 Blast hits to 73 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 250.0) & (original description: Putative PGSC0003DMG400030508, Description = BnaA02g27000D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf11995_89436-93952' '(at3g08030 : 514.0) Protein of unknown function, DUF642; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF642 (TAIR:AT2G41800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68437 : 503.0) no description available & (reliability: 1028.0) & (original description: Putative BnaA05g02440D, Description = BnaA05g02440D protein, PFAM = PF04862;PF04862)' T '35.2' 'not assigned.unknown' 'niben101scf12009_6695-8914' ' no hits & (original description: Putative , Description = Putative egg cell-secreted protein 1.2-like, PFAM = PF05617)' T '35.2' 'not assigned.unknown' 'niben101scf12009_23294-25833' ' no hits & (original description: Putative , Description = , PFAM = PF05617)' T '35.2' 'not assigned.unknown' 'niben101scf12011_13303-18182' '(at5g23395 : 135.0) Cox19-like CHCH family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 270.0) & (original description: Putative CHP, Description = Coiled-coil-helix-coiled-coil-helix domain containing protein, PFAM = PF06747)' T '35.2' 'not assigned.unknown' 'niben101scf12011_183983-191733' ' no hits & (original description: Putative F383_13597, Description = tRNA 2-thiocytidine biosynthesis TtcA, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf12017_635789-645973' '(at5g63220 : 437.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0363 (InterPro:IPR007317); Has 304 Blast hits to 301 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 121; Plants - 35; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (gnl|cdd|38234 : 185.0) no description available & (gnl|cdd|67790 : 97.0) no description available & (reliability: 874.0) & (original description: Putative At5g63220, Description = At5g63220, PFAM = PF04190)' T '35.2' 'not assigned.unknown' 'niben101scf12045_564156-569310' '(at1g54460 : 121.0) TPX2 (targeting protein for Xklp2) protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: WVD2-like 1 (TAIR:AT3G04630.3); Has 583 Blast hits to 565 proteins in 94 species: Archae - 0; Bacteria - 3; Metazoa - 163; Fungi - 46; Plants - 315; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 242.0) & (original description: Putative F4I4, Description = TPX2 (Targeting protein for Xklp2) family protein, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'niben101scf12063_106734-109213' '(at5g02640 : 104.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf12069_127286-129771' ' no hits & (original description: Putative , Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf12076_86182-91637' ' no hits & (original description: Putative , Description = , PFAM = PF05627)' T '35.2' 'not assigned.unknown' 'niben101scf12084_185365-187742' '(at5g64816 : 204.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 408.0) & (original description: Putative At5g64816, Description = Uncharacterized protein At5g64816, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf12089_9034-16297' ' no hits & (original description: Putative PGSC0003DMG400022757, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf12102_19561-21930' ' no hits & (original description: Putative PGSC0003DMG402000859, Description = Pectate lyase, PFAM = PF04431)' T '35.2' 'not assigned.unknown' 'niben101scf12102_175509-178030' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf12112_465107-473970' '(at4g14000 : 331.0) Putative methyltransferase family protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G43320.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38131 : 194.0) no description available & (reliability: 662.0) & (original description: Putative At4g14000, Description = Putative methyltransferase family protein, PFAM = PF10294)' T '35.2' 'not assigned.unknown' 'niben101scf12127_87109-89807' '(at3g13440 : 335.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, acetate biosynthetic process from carbon monoxide, methanol oxidation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase small (InterPro:IPR007848), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052); Has 2452 Blast hits to 2450 proteins in 945 species: Archae - 168; Bacteria - 1395; Metazoa - 177; Fungi - 134; Plants - 115; Viruses - 0; Other Eukaryotes - 463 (source: NCBI BLink). & (gnl|cdd|38401 : 246.0) no description available & (gnl|cdd|32715 : 97.0) no description available & (reliability: 670.0) & (original description: Putative N6AMT1, Description = HemK methyltransferase family member 2, PFAM = PF05175)' T '35.2' 'not assigned.unknown' 'niben101scf12132_65373-70350' '(at2g46890 : 370.0) FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system, integral to membrane, cytoplasm; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104), Protein of unknown function DUF1295 (InterPro:IPR010721); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1295) (TAIR:AT1G18180.1); Has 1895 Blast hits to 1895 proteins in 350 species: Archae - 2; Bacteria - 474; Metazoa - 74; Fungi - 141; Plants - 112; Viruses - 0; Other Eukaryotes - 1092 (source: NCBI BLink). & (gnl|cdd|39849 : 265.0) no description available & (gnl|cdd|70433 : 181.0) no description available & (reliability: 740.0) & (original description: Putative BnaA05g01010D, Description = BnaA05g01010D protein, PFAM = PF06966)' T '35.2' 'not assigned.unknown' 'niben101scf12141_43438-51032' '(at1g65900 : 513.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 306 Blast hits to 306 proteins in 119 species: Archae - 19; Bacteria - 238; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 1026.0) & (original description: Putative At1g65900, Description = At1g65900/F12P19_7, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf12143_4562-6822' ' (original description: Putative MIF1, Description = Mini zinc finger protein 1, PFAM = PF04770)' T '35.2' 'not assigned.unknown' 'niben101scf12159_163100-165702' ' no hits & (original description: Putative F383_09440, Description = Ribosomal N-lysine methyltransferase 5, PFAM = PF15365)' T '35.2' 'not assigned.unknown' 'niben101scf12197_212336-214578' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf12197_399103-401555' ' no hits & (original description: Putative PGSC0003DMG400034454, Description = Glycine rich protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf12197_415259-423215' '(at4g28200 : 698.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), U3 small nucleolar RNA-associated protein 6 (InterPro:IPR013949); Has 492 Blast hits to 480 proteins in 206 species: Archae - 0; Bacteria - 2; Metazoa - 128; Fungi - 191; Plants - 60; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|37607 : 429.0) no description available & (gnl|cdd|34790 : 167.0) no description available & (reliability: 1396.0) & (original description: Putative BnaA08g13850D, Description = BnaA08g13850D protein, PFAM = PF08640)' T '35.2' 'not assigned.unknown' 'niben101scf12210_28545-39211' '(at1g16720 : 866.0) Encodes HCF173, a protein with weak similarities to the superfamily of the short-chain dehydrogenases/reductases. HCF173 is involved in the initiation of translation of the psbA mRNA. Mutants shows a high chlorophyll fluorescence phenotype (hcf) and are severely affected in the accumulation of PSII subunits. The protein HCF173 is localized in the chloroplast, where it is mainly associated with the membrane system and is part of a higher molecular weight complex with psbA mRNA as a component of this complex.; high chlorophyll fluorescence phenotype 173 (HCF173); FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: photosystem II assembly, translational initiation; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (InterPro:IPR013857), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G18810.2); Has 1950 Blast hits to 1792 proteins in 453 species: Archae - 27; Bacteria - 1263; Metazoa - 9; Fungi - 6; Plants - 464; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|36417 : 214.0) no description available & (gnl|cdd|87565 : 94.9) no description available & (reliability: 1732.0) & (original description: Putative CPLD10, Description = Predicted protein, PFAM = PF13460;PF13460;PF08547)' T '35.2' 'not assigned.unknown' 'niben101scf12210_72032-86647' '(at2g46900 : 499.0) CONTAINS InterPro DOMAIN/s: Basic helix-loop-helix, Nulp1-type (InterPro:IPR006994); Has 2929 Blast hits to 2464 proteins in 333 species: Archae - 2; Bacteria - 151; Metazoa - 913; Fungi - 372; Plants - 141; Viruses - 47; Other Eukaryotes - 1303 (source: NCBI BLink). & (gnl|cdd|37633 : 411.0) no description available & (gnl|cdd|68482 : 351.0) no description available & (reliability: 998.0) & (original description: Putative TCM_004994, Description = Nulp1-type, putative, PFAM = PF04910)' T '35.2' 'not assigned.unknown' 'niben101scf12211_180704-184037' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf12211_323308-326036' '(at2g12462 : 138.0) BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G15760.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative , Description = , PFAM = PF07647)' T '35.2' 'not assigned.unknown' 'niben101scf12211_333793-338279' '(at1g72270 : 251.0) LOCATED IN: mitochondrion; EXPRESSED IN: shoot apex, embryo, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: PIF / Ping-Pong family of plant transposases (TAIR:AT3G55350.1). & (gnl|cdd|39785 : 106.0) no description available & (reliability: 502.0) & (original description: Putative , Description = , PFAM = PF13359)' T '35.2' 'not assigned.unknown' 'niben101scf12258_128581-142151' '(at4g28080 : 1820.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G01320.2); Has 11837 Blast hits to 4947 proteins in 554 species: Archae - 95; Bacteria - 3252; Metazoa - 4987; Fungi - 1783; Plants - 350; Viruses - 14; Other Eukaryotes - 1356 (source: NCBI BLink). & (gnl|cdd|37050 : 355.0) no description available & (reliability: 3640.0) & (original description: Putative TSS, Description = Protein TSS, PFAM = PF15044;PF12807;PF13424;PF13424)' T '35.2' 'not assigned.unknown' 'niben101scf12258_141768-156794' '(at4g30850 : 390.0) heptahelical transmembrane protein homologous to human adiponectin receptors and progestin receptors; heptahelical transmembrane protein2 (HHP2); FUNCTIONS IN: receptor activity; INVOLVED IN: response to hormone stimulus, response to sucrose stimulus; LOCATED IN: integral to membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Hly-III related (InterPro:IPR004254); BEST Arabidopsis thaliana protein match is: heptahelical protein 3 (TAIR:AT2G24150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35967 : 240.0) no description available & (gnl|cdd|86213 : 139.0) no description available & (reliability: 780.0) & (original description: Putative HHP2, Description = Heptahelical transmembrane protein 2, PFAM = PF03006)' T '35.2' 'not assigned.unknown' 'niben101scf12266_179887-182901' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf12266_679855-685633' ' no hits & (original description: Putative , Description = 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, PFAM = PF13259)' T '35.2' 'not assigned.unknown' 'niben101scf12270_42140-44859' ' (original description: Putative , Description = , PFAM = PF04520)' T '35.2' 'not assigned.unknown' 'niben101scf12270_71713-81153' '(at3g52570 : 285.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: intracellular protein transport, GPI anchor metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: PGAP1-like (InterPro:IPR012908); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G10030.1); Has 2648 Blast hits to 2646 proteins in 970 species: Archae - 27; Bacteria - 1772; Metazoa - 182; Fungi - 164; Plants - 106; Viruses - 0; Other Eukaryotes - 397 (source: NCBI BLink). & (gnl|cdd|37593 : 150.0) no description available & (reliability: 570.0) & (original description: Putative At3g52570, Description = Abhydrolase domain-containing protein 11, PFAM = PF12697)' T '35.2' 'not assigned.unknown' 'niben101scf12270_374125-376445' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf12277_342479-346721' '(at4g08240 : 102.0) unknown protein; Has 33 Blast hits to 33 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative , Description = Histone-lysine N-methyltransferase SUV420H14-20, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf12280_127350-130218' '(at1g16320 : 282.0) Uncharacterized conserved protein (DUF2358); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); BEST Arabidopsis thaliana protein match is: Uncharacterized conserved protein (DUF2358) (TAIR:AT1G79510.2); Has 274 Blast hits to 274 proteins in 79 species: Archae - 0; Bacteria - 78; Metazoa - 80; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 564.0) & (original description: Putative , Description = Wollemia nobilis Ref_Wollemi_Transcript_28887_1569 transcribed RNA sequence, PFAM = PF10184)' T '35.2' 'not assigned.unknown' 'niben101scf12289_113659-132371' '(at5g49900 : 1286.0) Beta-glucosidase, GBA2 type family protein; FUNCTIONS IN: catalytic activity, glucosylceramidase activity; INVOLVED IN: glucosylceramide catabolic process, sphingolipid metabolic process; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glucosylceramidase (InterPro:IPR006775), Six-hairpin glycosidase-like (InterPro:IPR008928), Beta-glucosidase, GBA2 type (InterPro:IPR014551); BEST Arabidopsis thaliana protein match is: Beta-glucosidase, GBA2 type family protein (TAIR:AT1G33700.2); Has 905 Blast hits to 755 proteins in 183 species: Archae - 77; Bacteria - 324; Metazoa - 146; Fungi - 0; Plants - 261; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (gnl|cdd|37330 : 1109.0) no description available & (gnl|cdd|68263 : 520.0) no description available & (reliability: 2572.0) & (original description: Putative GBA2, Description = GBA2, PFAM = PF04685;PF12215)' T '35.2' 'not assigned.unknown' 'niben101scf12289_130099-137046' '(gnl|cdd|37330 : 100.0) no description available & (at5g49900 : 84.7) Beta-glucosidase, GBA2 type family protein; FUNCTIONS IN: catalytic activity, glucosylceramidase activity; INVOLVED IN: glucosylceramide catabolic process, sphingolipid metabolic process; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glucosylceramidase (InterPro:IPR006775), Six-hairpin glycosidase-like (InterPro:IPR008928), Beta-glucosidase, GBA2 type (InterPro:IPR014551); BEST Arabidopsis thaliana protein match is: Beta-glucosidase, GBA2 type family protein (TAIR:AT1G33700.2); Has 905 Blast hits to 755 proteins in 183 species: Archae - 77; Bacteria - 324; Metazoa - 146; Fungi - 0; Plants - 261; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 169.4) & (original description: Putative At3g24180, Description = Non-lysosomal glucosylceramidase, PFAM = PF04685)' T '35.2' 'not assigned.unknown' 'niben101scf12305_60179-62723' '(at4g27745 : 186.0) Yippee family putative zinc-binding protein; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: Yippee family putative zinc-binding protein (TAIR:AT5G53940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|66871 : 144.0) no description available & (gnl|cdd|38609 : 140.0) no description available & (q8s5m8|yipl_orysa : 124.0) Putative yippee-like protein Os10g0369500 - Oryza sativa (Rice) & (reliability: 372.0) & (original description: Putative ypel, Description = Protein yippee-like, PFAM = PF03226)' T '35.2' 'not assigned.unknown' 'niben101scf12307_257614-260231' ' (original description: Putative ltp, Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'niben101scf12308_24502-38823' ' no hits & (original description: Putative TTC5, Description = Tetratricopeptide repeat protein 5, PFAM = PF16669)' T '35.2' 'not assigned.unknown' 'niben101scf12308_76056-79006' ' no hits & (original description: Putative , Description = Uncharacterized protein isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf12320_57950-65256' ' no hits & (original description: Putative F383_00866, Description = Octanoyltransferase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf12321_12297-14695' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf12348_1988-5839' '(at5g47635 : 106.0) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT2G40113.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative PGSC0003DMG400013298, Description = Pollen Ole e 1 allergen and extensin family protein, putative, PFAM = PF01190)' T '35.2' 'not assigned.unknown' 'niben101scf12355_1-1399' ' no hits & (original description: Putative orf101a, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf12360_26319-32759' '(at1g29700 : 410.0) Metallo-hydrolase/oxidoreductase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 404 Blast hits to 404 proteins in 124 species: Archae - 0; Bacteria - 197; Metazoa - 0; Fungi - 2; Plants - 43; Viruses - 0; Other Eukaryotes - 162 (source: NCBI BLink). & (reliability: 820.0) & (original description: Putative F15D2.25, Description = Metallo-beta-lactamase domain-containing protein, PFAM = PF13483)' T '35.2' 'not assigned.unknown' 'niben101scf12372_28896-33548' ' no hits & (original description: Putative TCM_025255, Description = ROP-interactive CRIB motif-containing protein 4, putative isoform 2, PFAM = PF00786)' T '35.2' 'not assigned.unknown' 'niben101scf12373_158289-172184' '(at2g42670 : 343.0) Protein of unknown function (DUF1637); FUNCTIONS IN: cysteamine dioxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1637 (InterPro:IPR012864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1637) (TAIR:AT3G58670.3); Has 366 Blast hits to 366 proteins in 96 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (gnl|cdd|39482 : 304.0) no description available & (gnl|cdd|71286 : 302.0) no description available & (reliability: 686.0) & (original description: Putative PCO4, Description = Plant cysteine oxidase 4, PFAM = PF07847)' T '35.2' 'not assigned.unknown' 'niben101scf12383_50993-154146' ' no hits & (original description: Putative glysoja_035436, Description = Ubiquitin-like-specific protease 1D, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf12394_122753-125031' ' (original description: Putative LTP, Description = Lipid transfer protein, PFAM = PF14368)' T '35.2' 'not assigned.unknown' 'niben101scf12394_212340-215203' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf12403_87024-90688' '(at2g12646 : 313.0) PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT3G60670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|86704 : 169.0) no description available & (reliability: 626.0) & (original description: Putative Sb04g004830, Description = Putative uncharacterized protein Sb04g004830, PFAM = PF04640)' T '35.2' 'not assigned.unknown' 'niben101scf12404_76740-79078' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf12414_237252-240022' '(at5g62280 : 157.0) Protein of unknown function (DUF1442); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1442 (InterPro:IPR009902); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1442) (TAIR:AT2G45360.1); Has 92 Blast hits to 92 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70732 : 100.0) no description available & (reliability: 314.0) & (original description: Putative , Description = , PFAM = PF07279)' T '35.2' 'not assigned.unknown' 'niben101scf12415_68283-70648' ' no hits & (original description: Putative PGSC0003DMG400023217, Description = Os07g0599700 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf12427_73265-77440' '(at2g38320 : 447.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 34 (TBL34); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 35 (TAIR:AT5G01620.2); Has 1346 Blast hits to 1317 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 1344; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|72785 : 179.0) no description available & (reliability: 894.0) & (original description: Putative TBL34, Description = Protein trichome birefringence-like 34, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf12428_43974-47667' '(at5g45690 : 312.0) Protein of unknown function (DUF1264); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: seed, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1264 (InterPro:IPR010686); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1264) (TAIR:AT4G18920.1); Has 288 Blast hits to 288 proteins in 123 species: Archae - 0; Bacteria - 122; Metazoa - 0; Fungi - 64; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|70357 : 289.0) no description available & (reliability: 624.0) & (original description: Putative F383_05903, Description = Histone acetyltransferase, PFAM = PF06884)' T '35.2' 'not assigned.unknown' 'niben101scf12428_44058-46954' '(at1g29680 : 182.0) Protein of unknown function (DUF1264); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1264 (InterPro:IPR010686); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1264) (TAIR:AT5G45690.1); Has 286 Blast hits to 286 proteins in 122 species: Archae - 0; Bacteria - 120; Metazoa - 0; Fungi - 64; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|70357 : 179.0) no description available & (reliability: 364.0) & (original description: Putative BnaA01g09730D, Description = BnaA01g09730D protein, PFAM = PF06884)' T '35.2' 'not assigned.unknown' 'niben101scf12443_12059-23421' '(at4g35930 : 259.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G61340.1); Has 94 Blast hits to 94 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 518.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf12443_153156-156921' '(at2g05910 : 193.0) Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT5G20640.1); Has 302 Blast hits to 301 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 300; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86676 : 119.0) no description available & (reliability: 386.0) & (original description: Putative At2g05910, Description = Protein LURP-one-related 6, PFAM = PF04525)' T '35.2' 'not assigned.unknown' 'niben101scf12443_181305-186667' '(at5g20680 : 564.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 16; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 14 (TAIR:AT5G64020.1); Has 1636 Blast hits to 1561 proteins in 93 species: Archae - 0; Bacteria - 11; Metazoa - 58; Fungi - 27; Plants - 1333; Viruses - 7; Other Eukaryotes - 200 (source: NCBI BLink). & (gnl|cdd|72785 : 118.0) no description available & (reliability: 1128.0) & (original description: Putative TBL16, Description = Protein trichome birefringence-like 16, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf12443_233052-246408' '(at2g28230 : 331.0) TATA-binding related factor (TRF) of subunit 20 of Mediator complex; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med20 (InterPro:IPR013921); BEST Arabidopsis thaliana protein match is: TATA-binding related factor (TRF) of subunit 20 of Mediator complex (TAIR:AT4G09070.1); Has 80 Blast hits to 80 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|87577 : 171.0) no description available & (gnl|cdd|36597 : 165.0) no description available & (reliability: 662.0) & (original description: Putative MED20A, Description = Mediator of RNA polymerase II transcription subunit 20a, PFAM = PF08612)' T '35.2' 'not assigned.unknown' 'niben101scf12443_301475-303789' '(at2g06255 : 124.0) ELF4-like 3 (ELF4-L3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1313 (InterPro:IPR009741); BEST Arabidopsis thaliana protein match is: ELF4-like 4 (TAIR:AT1G17455.2); Has 149 Blast hits to 148 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 148; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|70474 : 115.0) no description available & (reliability: 248.0) & (original description: Putative EFL3, Description = Protein ELF4-LIKE 3, PFAM = PF07011)' T '35.2' 'not assigned.unknown' 'niben101scf12469_32690-35997' '(at3g05320 : 525.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1050.0) & (original description: Putative fut12, Description = Protein-O-fucosyltransferase 1, PFAM = PF10250)' T '35.2' 'not assigned.unknown' 'niben101scf12481_190404-193655' ' no hits & (original description: Putative PGSC0003DMG400030926, Description = , PFAM = PF17181)' T '35.2' 'not assigned.unknown' 'niben101scf12515_78778-102386' '(at3g25400 : 142.0) CONTAINS InterPro DOMAIN/s: NTP Pyrophosphohydrolase MazG-related, RS21-C6 (InterPro:IPR011394), EAR (InterPro:IPR009039), NTP pyrophosphohydrolase MazG, putative catalytic core (InterPro:IPR004518); Has 1123 Blast hits to 1121 proteins in 452 species: Archae - 22; Bacteria - 753; Metazoa - 81; Fungi - 3; Plants - 83; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative DCTPP1, Description = dCTP pyrophosphatase 1, PFAM = PF12643)' T '35.2' 'not assigned.unknown' 'niben101scf12522_93872-105897' '(at4g17960 : 124.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G46620.1); Has 46 Blast hits to 45 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 248.0) & (original description: Putative F383_13537, Description = Putative phospholipid hydroperoxide glutathione peroxidase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf12540_41057-52726' '(at4g27020 : 852.0) unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1704.0) & (original description: Putative BnaC02g13480D, Description = BnaC02g13480D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf12555_32262-34850' '(at5g25500 : 183.0) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf12560_25573-28349' ' no hits & (original description: Putative PGSC0003DMG400044842, Description = , PFAM = PF03106)' T '35.2' 'not assigned.unknown' 'niben101scf12582_173419-177930' '(at3g08890 : 289.0) Protein of unknown function, DUF538; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT5G37070.1); Has 520 Blast hits to 520 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 520; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86647 : 141.0) no description available & (reliability: 578.0) & (original description: Putative BnaCnng40610D, Description = BnaCnng40610D protein, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben101scf12589_7667-10230' ' no hits & (original description: Putative PGSC0003DMG400028226, Description = , PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'niben101scf12589_14298-16909' ' no hits & (original description: Putative PMEI, Description = Petin methylesterase inhibitor, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf12589_187802-190155' ' (original description: Putative ATRBL15, Description = Protein-lysine N-methyltransferase B456_006G146100, PFAM = PF10237)' T '35.2' 'not assigned.unknown' 'niben101scf12628_235645-242763' '(at5g11730 : 528.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G25970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86287 : 451.0) no description available & (reliability: 1056.0) & (original description: Putative Sb01g009220, Description = Putative uncharacterized protein Sb01g009220, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben101scf12628_305279-314415' '(at1g55340 : 117.0) Protein of unknown function (DUF1639); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1639 (InterPro:IPR012438); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1639) (TAIR:AT3G03880.1); Has 250 Blast hits to 247 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 250; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative Os05g0556500, Description = Os05g0556500 protein, PFAM = PF07797)' T '35.2' 'not assigned.unknown' 'niben101scf12639_190822-193358' ' no hits & (original description: Putative PGSC0003DMG400039425, Description = , PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'niben101scf12651_94823-97401' '(at5g25840 : 161.0) Protein of unknown function (DUF1677); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1677, plant (InterPro:IPR012876); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1677) (TAIR:AT1G79770.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|71349 : 139.0) no description available & (reliability: 322.0) & (original description: Putative BnaC06g18890D, Description = CASP-like protein, PFAM = PF07911)' T '35.2' 'not assigned.unknown' 'niben101scf12652_80065-81850' ' no hits & (original description: Putative glysoja_007451, Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = PF08284)' T '35.2' 'not assigned.unknown' 'niben101scf12670_49469-52413' '(at1g06050 : 376.0) Protein of unknown function (DUF1336); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT5G10750.1); Has 364 Blast hits to 356 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 307; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|70520 : 203.0) no description available & (reliability: 752.0) & (original description: Putative BnaC05g04110D, Description = Pleckstrin-like (PH) and lipid-binding START domain protein, PFAM = PF07059)' T '35.2' 'not assigned.unknown' 'niben101scf12676_143126-145530' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf12680_326705-329575' '(at1g24480 : 323.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G24805.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 646.0) & (original description: Putative T407, Description = Putative uncharacterized protein T407, PFAM = PF08241)' T '35.2' 'not assigned.unknown' 'niben101scf12680_329175-338195' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf12686_186356-191563' '(at2g15730 : 510.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G34420.1); Has 149 Blast hits to 147 proteins in 26 species: Archae - 0; Bacteria - 31; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1020.0) & (original description: Putative PGSC0003DMG400025901, Description = Sulfotransferase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf12695_11737-16797' ' no hits & (original description: Putative PGSC0003DMG400013541, Description = Putative uncharacterized protein Sb04g003130, PFAM = PF00076)' T '35.2' 'not assigned.unknown' 'niben101scf12711_42913-46388' '(at3g57400 : 280.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52500.1); Has 38 Blast hits to 38 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 560.0) & (original description: Putative BnaC04g24230D, Description = BnaC04g24230D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf12714_431-2841' ' no hits & (original description: Putative NAC4, Description = NAC transcription factor, PFAM = PF02365)' T '35.2' 'not assigned.unknown' 'niben101scf12715_213260-216008' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf12725_117445-124469' '(at3g48510 : 134.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G63350.1); Has 98 Blast hits to 98 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf12732_49293-55652' '(at1g44000 : 256.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11911.1); Has 216 Blast hits to 212 proteins in 76 species: Archae - 0; Bacteria - 96; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 512.0) & (original description: Putative SGRL, Description = Protein STAY-GREEN LIKE, chloroplastic, PFAM = PF12638)' T '35.2' 'not assigned.unknown' 'niben101scf12735_82620-85711' '(at3g02160 : 176.0) Bromodomain transcription factor; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Histone-fold (InterPro:IPR009072), Bromodomain transcription factor (InterPro:IPR006565); BEST Arabidopsis thaliana protein match is: Bromodomain transcription factor (TAIR:AT5G15570.1); Has 180 Blast hits to 180 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (gnl|cdd|37600 : 176.0) no description available & (gnl|cdd|47875 : 91.1) no description available & (reliability: 352.0) & (original description: Putative glysoja_019227, Description = Transcription initiation factor TFIID subunit 3, PFAM = PF07524)' T '35.2' 'not assigned.unknown' 'niben101scf12735_88333-95171' '(at1g74160 : 198.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G18620.1); Has 3407 Blast hits to 2217 proteins in 314 species: Archae - 0; Bacteria - 264; Metazoa - 1296; Fungi - 318; Plants - 346; Viruses - 34; Other Eukaryotes - 1149 (source: NCBI BLink). & (reliability: 396.0) & (original description: Putative PGSC0003DMG400001462, Description = BnaA02g16740D protein, PFAM = PF14309)' T '35.2' 'not assigned.unknown' 'niben101scf12738_103306-105927' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf12751_27884-35577' '(at2g14910 : 364.0) unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G14970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 728.0) & (original description: Putative BnaA09g52750D, Description = BnaA09g52750D protein, PFAM = PF05542;PF05542)' T '35.2' 'not assigned.unknown' 'niben101scf12762_8466-11380' '(at2g27770 : 213.0) Plant protein of unknown function (DUF868); LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT3G04860.1); Has 288 Blast hits to 288 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 288; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|69434 : 208.0) no description available & (reliability: 426.0) & (original description: Putative , Description = , PFAM = PF05910)' T '35.2' 'not assigned.unknown' 'niben101scf12783_160980-165701' '(at3g12210 : 246.0) DNA binding; FUNCTIONS IN: DNA binding; INVOLVED IN: DNA repair; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-hairpin-helix DNA-binding motif, class 1 (InterPro:IPR003583); Has 226 Blast hits to 226 proteins in 103 species: Archae - 3; Bacteria - 2; Metazoa - 90; Fungi - 78; Plants - 41; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative PPUP4038, Description = PPUP4038, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf12789_124018-125932' '(at5g48540 : 248.0) receptor-like protein kinase-related family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: Receptor-like protein kinase-related family protein (TAIR:AT3G22060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 496.0) & (original description: Putative CRRSP55, Description = Cysteine-rich repeat secretory protein 55, PFAM = PF01657;PF01657)' T '35.2' 'not assigned.unknown' 'niben101scf12841_92886-106841' '(at1g53400 : 153.0) Ubiquitin domain-containing protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Ubiquitin domain-containing protein (TAIR:AT5G45740.1); Has 319 Blast hits to 318 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 63; Plants - 89; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (gnl|cdd|35237 : 123.0) no description available & (reliability: 306.0) & (original description: Putative At1g53400, Description = AT1G53400 protein, PFAM = PF16455)' T '35.2' 'not assigned.unknown' 'niben101scf12846_16614-26953' '(at4g33630 : 598.0) EXECUTER1 (EX1); FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: response to singlet oxygen; LOCATED IN: thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3506 (InterPro:IPR021894), UvrB/UvrC protein (InterPro:IPR001943); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3506) (TAIR:AT1G27510.1); Has 324 Blast hits to 312 proteins in 85 species: Archae - 0; Bacteria - 8; Metazoa - 98; Fungi - 41; Plants - 94; Viruses - 5; Other Eukaryotes - 78 (source: NCBI BLink). & (reliability: 1196.0) & (original description: Putative EX1, Description = Protein EXECUTER 1, chloroplastic, PFAM = PF12014)' T '35.2' 'not assigned.unknown' 'niben101scf12847_41470-44587' ' no hits & (original description: Putative PGSC0003DMG400016320, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf12847_80260-86923' '(at3g23090 : 191.0) TPX2 (targeting protein for Xklp2) protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf apex, inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: WVD2-like 1 (TAIR:AT3G04630.3). & (reliability: 382.0) & (original description: Putative WDL3, Description = Protein WVD2-like 3, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'niben101scf12852_324689-329929' '(at3g53010 : 283.0) Domain of unknown function (DUF303) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF303, acetylesterase putative (InterPro:IPR005181); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF303) (TAIR:AT4G34215.2); Has 339 Blast hits to 339 proteins in 106 species: Archae - 2; Bacteria - 221; Metazoa - 0; Fungi - 1; Plants - 86; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (gnl|cdd|86388 : 80.0) no description available & (reliability: 566.0) & (original description: Putative At4g34215, Description = Probable carbohydrate esterase At4g34215, PFAM = PF03629)' T '35.2' 'not assigned.unknown' 'niben101scf12852_417241-422492' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf12886_4917-7804' '(at1g64870 : 164.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G45200.1); Has 99 Blast hits to 91 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative PGSC0003DMG400046394, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf12886_13522-16434' '(at1g64870 : 159.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G45200.1); Has 99 Blast hits to 91 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative PGSC0003DMG400046394, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf12889_60665-67746' '(at5g16870 : 223.0) Peptidyl-tRNA hydrolase II (PTH2) family protein; FUNCTIONS IN: aminoacyl-tRNA hydrolase activity; INVOLVED IN: translation; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-tRNA hydrolase, PTH2 (InterPro:IPR002833); BEST Arabidopsis thaliana protein match is: Peptidyl-tRNA hydrolase II (PTH2) family protein (TAIR:AT3G03010.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38492 : 182.0) no description available & (gnl|cdd|48405 : 166.0) no description available & (reliability: 446.0) & (original description: Putative Ptrh2, Description = Peptidyl-tRNA hydrolase 2, mitochondrial, PFAM = PF01981)' T '35.2' 'not assigned.unknown' 'niben101scf12922_81403-84026' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf12924_13766-17197' '(at5g42090 : 551.0) Lung seven transmembrane receptor family protein; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT5G18520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37780 : 489.0) no description available & (gnl|cdd|87161 : 136.0) no description available & (reliability: 1102.0) & (original description: Putative tmr1, Description = Putative transmembrane receptor, PFAM = PF06814)' T '35.2' 'not assigned.unknown' 'niben101scf12928_152318-161366' '(at5g44250 : 482.0) Protein of unknown function DUF829, transmembrane 53; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF829, transmembrane 53 (InterPro:IPR008547); BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF829, transmembrane 53 (TAIR:AT2G15695.1); Has 92 Blast hits to 92 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 2; Plants - 70; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (gnl|cdd|37732 : 188.0) no description available & (gnl|cdd|69240 : 116.0) no description available & (reliability: 964.0) & (original description: Putative At5g44250, Description = At5g44250, PFAM = PF05705;PF05705)' T '35.2' 'not assigned.unknown' 'niben101scf12928_233006-237824' '(at1g47420 : 233.0) succinate dehydrogenase 5 (SDH5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 2 (TAIR:AT1G47260.1); Has 145 Blast hits to 145 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 466.0) & (original description: Putative SDH5, Description = Succinate dehydrogenase subunit 5, mitochondrial, PFAM = PF14290)' T '35.2' 'not assigned.unknown' 'niben101scf12938_2941-6279' '(at1g32583 : 142.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: tapetum determinant 1 (TAIR:AT4G24972.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative TDL1, Description = AtTDL1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf12941_29756-32073' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf12953_3969-7015' '(at1g22030 : 295.0) CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G77855.1); Has 99 Blast hits to 99 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 590.0) & (original description: Putative F383_03147, Description = Histidinol-phosphate aminotransferase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf12969_115042-131401' '(at5g04910 : 174.0) unknown protein; Has 71 Blast hits to 71 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative Os01g0265700, Description = Os01g0265700 protein, PFAM = PF14966)' T '35.2' 'not assigned.unknown' 'niben101scf12969_140138-143204' '(at1g60010 : 163.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10530.1); Has 185 Blast hits to 185 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 180; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative TCM_010230, Description = Serine/threonine-protein kinase TAO3, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf12983_261131-266081' '(at5g17510 : 276.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 552.0) & (original description: Putative BnaA10g17220D, Description = BnaA10g17220D protein, PFAM = PF15249)' T '35.2' 'not assigned.unknown' 'niben101scf12987_8478-77325' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf12994_83375-86527' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf12994_400261-402749' ' no hits & (original description: Putative PGSC0003DMG400004055, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf12994_459488-461895' ' no hits & (original description: Putative At1g48990, Description = Oleosin 16 kDa, PFAM = PF01277)' T '35.2' 'not assigned.unknown' 'niben101scf13002_138096-140470' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf13005_212441-214932' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13029_294578-304530' ' (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf13050_43338-46595' '(at3g60520 : 92.4) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02070.1); Has 107 Blast hits to 107 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 184.8) & (original description: Putative TCM_005618, Description = Late cornified envelope protein 1E, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13057_6311-11009' '(at3g27100 : 124.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39679 : 98.2) no description available & (reliability: 248.0) & (original description: Putative SUS1, Description = Transcription and mRNA export factor SUS1, PFAM = PF10163)' T '35.2' 'not assigned.unknown' 'niben101scf13063_102096-108815' '(at4g32350 : 137.0) Regulator of Vps4 activity in the MVB pathway protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061); BEST Arabidopsis thaliana protein match is: Regulator of Vps4 activity in the MVB pathway protein (TAIR:AT1G79910.1); Has 2836 Blast hits to 2289 proteins in 246 species: Archae - 0; Bacteria - 95; Metazoa - 1034; Fungi - 145; Plants - 397; Viruses - 5; Other Eukaryotes - 1160 (source: NCBI BLink). & (gnl|cdd|37238 : 109.0) no description available & (gnl|cdd|67036 : 94.9) no description available & (reliability: 274.0) & (original description: Putative At1g52315, Description = Regulator of Vps4 activity in the MVB pathway protein, PFAM = PF03398)' T '35.2' 'not assigned.unknown' 'niben101scf13103_203567-206391' ' no hits & (original description: Putative XERO1, Description = Dehydrin Xero 1, PFAM = PF00257)' T '35.2' 'not assigned.unknown' 'niben101scf13111_31189-36295' '(at5g41970 : 573.0) Metal-dependent protein hydrolase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent protein hydrolase (InterPro:IPR003226); BEST Arabidopsis thaliana protein match is: Metal-dependent protein hydrolase (TAIR:AT3G49320.1); Has 677 Blast hits to 672 proteins in 331 species: Archae - 0; Bacteria - 213; Metazoa - 146; Fungi - 144; Plants - 55; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (gnl|cdd|38159 : 490.0) no description available & (gnl|cdd|67314 : 339.0) no description available & (reliability: 1146.0) & (original description: Putative Myg1, Description = UPF0160 protein MYG1, mitochondrial, PFAM = PF03690)' T '35.2' 'not assigned.unknown' 'niben101scf13118_123674-130748' ' no hits & (original description: Putative , Description = Tetratricopeptide repeat-like superfamily protein, PFAM = PF16669)' T '35.2' 'not assigned.unknown' 'niben101scf13150_341259-343902' '(at5g66810 : 88.6) CONTAINS InterPro DOMAIN/s: CTLH, C-terminal LisH motif (InterPro:IPR006595); BEST Arabidopsis thaliana protein match is: LisH and RanBPM domains containing protein (TAIR:AT1G61150.1); Has 333 Blast hits to 242 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 47; Plants - 152; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf13162_25801-28307' '(at1g68350 : 86.7) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; Has 20 Blast hits to 20 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 173.4) & (original description: Putative , Description = , PFAM = PF05553)' T '35.2' 'not assigned.unknown' 'niben101scf13162_55011-58007' '(at1g25370 : 118.0) Protein of unknown function (DUF1639); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1639 (InterPro:IPR012438); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1639) (TAIR:AT1G68340.1); Has 265 Blast hits to 265 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 264; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|87373 : 81.8) no description available & (reliability: 236.0) & (original description: Putative , Description = , PFAM = PF07797)' T '35.2' 'not assigned.unknown' 'niben101scf13167_151886-157659' '(at3g26950 : 655.0) unknown protein; Has 27 Blast hits to 27 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1310.0) & (original description: Putative At3g26950, Description = At3g26950, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13179_6790-9633' ' no hits & (original description: Putative PGSC0003DMG400024562, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13186_150980-155580' '(at5g14710 : 161.0) CONTAINS InterPro DOMAIN/s: Proteasome assembly chaperone 3 (InterPro:IPR018788); Has 120 Blast hits to 120 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 2; Plants - 49; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|40025 : 125.0) no description available & (reliability: 322.0) & (original description: Putative D9002, Description = Proteasome assembly chaperone 3, PFAM = PF10178)' T '35.2' 'not assigned.unknown' 'niben101scf13186_237819-240406' ' no hits & (original description: Putative PGSC0003DMG400000520, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13188_54989-64441' '(at1g43245 : 246.0) SET domain-containing protein; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative , Description = , PFAM = PF00856)' T '35.2' 'not assigned.unknown' 'niben101scf13201_14428-19970' '(at5g12930 : 193.0) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 386.0) & (original description: Putative BnaA02g01310D, Description = BnaA02g01310D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13218_83610-86154' '(at4g33985 : 131.0) Protein of unknown function (DUF1685); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1685) (TAIR:AT2G15590.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|71376 : 107.0) no description available & (reliability: 262.0) & (original description: Putative , Description = , PFAM = PF07939)' T '35.2' 'not assigned.unknown' 'niben101scf13227_62421-66560' '(at3g06868 : 134.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf13230_164108-171584' '(at4g10140 : 223.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2062 (InterPro:IPR018639); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G33490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 446.0) & (original description: Putative Os05g0105500, Description = Os05g0105500 protein, PFAM = PF09835)' T '35.2' 'not assigned.unknown' 'niben101scf13231_193122-198762' '(at5g19855 : 187.0) Chaperonin-like RbcX protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin-like RbcX (InterPro:IPR003435); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 374.0) & (original description: Putative At5g19855, Description = Chaperonin-like RbcX protein, PFAM = PF02341)' T '35.2' 'not assigned.unknown' 'niben101scf13231_430971-434809' '(at3g53010 : 250.0) Domain of unknown function (DUF303) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF303, acetylesterase putative (InterPro:IPR005181); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF303) (TAIR:AT4G34215.2); Has 339 Blast hits to 339 proteins in 106 species: Archae - 2; Bacteria - 221; Metazoa - 0; Fungi - 1; Plants - 86; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (reliability: 500.0) & (original description: Putative TCM_033755, Description = Domain of Uncharacterized protein function (DUF303), putative, PFAM = PF03629)' T '35.2' 'not assigned.unknown' 'niben101scf13259_12061-22379' '(at5g60150 : 106.0) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 212.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf13259_106126-108545' ' (original description: Putative LgRT3, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf13289_250411-253964' '(at4g02720 : 209.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF926 (InterPro:IPR009269); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69563 : 125.0) no description available & (gnl|cdd|38023 : 93.3) no description available & (reliability: 418.0) & (original description: Putative nkap, Description = NF-kappa-B-activating protein, PFAM = PF06047)' T '35.2' 'not assigned.unknown' 'niben101scf13302_86116-89032' ' no hits & (original description: Putative , Description = , PFAM = PF13963)' T '35.2' 'not assigned.unknown' 'niben101scf13308_204482-207597' '(at3g03210 : 376.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 59 Blast hits to 59 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 752.0) & (original description: Putative BnaA05g32440D, Description = BnaA05g32440D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13331_4548-7066' ' no hits & (original description: Putative PGSC0003DMG400043599, Description = , PFAM = PF03107)' T '35.2' 'not assigned.unknown' 'niben101scf13371_133-6259' '(at3g07310 : 337.0) Protein of unknown function (DUF760); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF760 (InterPro:IPR008479); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF760) (TAIR:AT5G48590.1); Has 147 Blast hits to 143 proteins in 27 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|69084 : 332.0) no description available & (reliability: 674.0) & (original description: Putative F383_25220, Description = Phosphoserine aminotransferase, PFAM = PF05542)' T '35.2' 'not assigned.unknown' 'niben101scf13379_33111-36293' '(at5g18130 : 128.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 256.0) & (original description: Putative PGSC0003DMG400008354, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13391_54578-60488' '(at5g06440 : 369.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT3G11720.3). & (reliability: 738.0) & (original description: Putative TCM_023090, Description = Mitotic checkpoint serine/threonine-protein kinase BUB1, putative isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13391_62927-105431' '(at2g35900 : 147.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; Has 32 Blast hits to 32 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative At2g35900, Description = Putative uncharacterized protein At2g35900, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13393_1-3429' '(at5g51720 : 133.0) 2 iron, 2 sulfur cluster binding; FUNCTIONS IN: 2 iron, 2 sulfur cluster binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Iron sulphur-containing domain, CDGSH-type (InterPro:IPR018967); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38671 : 107.0) no description available & (reliability: 266.0) & (original description: Putative NEET, Description = CDGSH iron-sulfur domain-containing protein NEET, PFAM = PF09360)' T '35.2' 'not assigned.unknown' 'niben101scf13394_116810-127235' '(at1g64150 : 270.0) Uncharacterized protein family (UPF0016); LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0016 (InterPro:IPR001727); BEST Arabidopsis thaliana protein match is: Uncharacterized protein family (UPF0016) (TAIR:AT4G13590.1); Has 1632 Blast hits to 1475 proteins in 546 species: Archae - 26; Bacteria - 846; Metazoa - 163; Fungi - 173; Plants - 204; Viruses - 0; Other Eukaryotes - 220 (source: NCBI BLink). & (gnl|cdd|38092 : 138.0) no description available & (gnl|cdd|32302 : 101.0) no description available & (reliability: 540.0) & (original description: Putative At1g64150, Description = GDT1-like protein 1, chloroplastic, PFAM = PF01169;PF01169)' T '35.2' 'not assigned.unknown' 'niben101scf13411_463387-473635' '(at3g22290 : 572.0) Endoplasmic reticulum vesicle transporter protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1692 (InterPro:IPR012936); BEST Arabidopsis thaliana protein match is: Endoplasmic reticulum vesicle transporter protein (TAIR:AT1G22200.1); Has 1158 Blast hits to 1071 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 384; Fungi - 263; Plants - 270; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink). & (gnl|cdd|37878 : 336.0) no description available & (gnl|cdd|87414 : 246.0) no description available & (reliability: 1144.0) & (original description: Putative At3g22280, Description = Endoplasmic reticulum vesicle transporter protein, PFAM = PF07970;PF13850)' T '35.2' 'not assigned.unknown' 'niben101scf13411_497845-523012' ' no hits & (original description: Putative , Description = , PFAM = PF08284)' T '35.2' 'not assigned.unknown' 'niben101scf13411_526048-528689' '(at3g13230 : 340.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087); Has 734 Blast hits to 734 proteins in 323 species: Archae - 189; Bacteria - 0; Metazoa - 158; Fungi - 192; Plants - 83; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|38483 : 307.0) no description available & (gnl|cdd|31291 : 159.0) no description available & (reliability: 680.0) & (original description: Putative pno1, Description = RNA-binding protein pno1, PFAM = PF00013)' T '35.2' 'not assigned.unknown' 'niben101scf13429_283826-286791' ' (original description: Putative hyp1, Description = 36.4 kDa proline-rich protein, PFAM = PF14547)' T '35.2' 'not assigned.unknown' 'niben101scf13429_446069-450555' ' no hits & (original description: Putative PGSC0003DMG400004801, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13438_44418-47325' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf13448_28688-34352' '(at1g68310 : 199.0) Encodes a protein that has been shown to specifically interact with a sequence motif, PIEPPPHH, in the cytoplasmic tail of a membrane protein that directs the protein from the ER to vacuoles where it is internalized.; FUNCTIONS IN: vacuolar sorting signal binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF59 (InterPro:IPR002744); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF59) (TAIR:AT3G50845.1); Has 563 Blast hits to 563 proteins in 217 species: Archae - 4; Bacteria - 0; Metazoa - 246; Fungi - 136; Plants - 85; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (gnl|cdd|38591 : 179.0) no description available & (gnl|cdd|34734 : 124.0) no description available & (reliability: 398.0) & (original description: Putative AE7, Description = Protein AE7, PFAM = PF01883)' T '35.2' 'not assigned.unknown' 'niben101scf13518_76824-79840' '(at4g27030 : 347.0) Encodes an unusual palmitate desaturase that is highly substrate specific. It introduces a delta-3 trans double bond at palmitate at the sn-2 position of phosphatidylglycerol.; fatty acid desaturase A (FADA); FUNCTIONS IN: Delta 3-trans hexadecenoic acid phosphatidylglycerol desaturase activity; INVOLVED IN: response to karrikin, phosphatidylglycerol metabolic process, unsaturated fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kua-ubiquitin conjugating enzyme hybrid, localisation (InterPro:IPR019547); BEST Arabidopsis thaliana protein match is: Kua-ubiquitin conjugating enzyme hybrid localisation domain (TAIR:AT1G62190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38221 : 299.0) no description available & (reliability: 694.0) & (original description: Putative FAD4, Description = Fatty acid desaturase 4, chloroplastic, PFAM = PF10520)' T '35.2' 'not assigned.unknown' 'niben101scf13522_175065-177532' ' (original description: Putative pol, Description = Retrotransposon protein, putative, unclassified, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf13525_50755-68394' '(at2g39740 : 342.0) Nucleotidyltransferase family protein; BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT3G45750.1); Has 1708 Blast hits to 1608 proteins in 227 species: Archae - 0; Bacteria - 13; Metazoa - 799; Fungi - 328; Plants - 255; Viruses - 0; Other Eukaryotes - 313 (source: NCBI BLink). & (gnl|cdd|37488 : 133.0) no description available & (gnl|cdd|34857 : 106.0) no description available & (reliability: 684.0) & (original description: Putative Os01g0846450, Description = Os01g0846450 protein, PFAM = PF01909)' T '35.2' 'not assigned.unknown' 'niben101scf13527_62670-73162' '(at2g03070 : 367.0) Encodes a subunit of the Mediator complex. Regulates plant defense and flowering.; mediator subunit 8 (MED8); Has 21670 Blast hits to 11104 proteins in 489 species: Archae - 4; Bacteria - 472; Metazoa - 8306; Fungi - 2813; Plants - 2364; Viruses - 51; Other Eukaryotes - 7660 (source: NCBI BLink). & (reliability: 734.0) & (original description: Putative MED8, Description = Mediator of RNA polymerase II transcription subunit 8, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13527_66739-72880' '(at2g03070 : 87.0) Encodes a subunit of the Mediator complex. Regulates plant defense and flowering.; mediator subunit 8 (MED8); Has 21670 Blast hits to 11104 proteins in 489 species: Archae - 4; Bacteria - 472; Metazoa - 8306; Fungi - 2813; Plants - 2364; Viruses - 51; Other Eukaryotes - 7660 (source: NCBI BLink). & (reliability: 174.0) & (original description: Putative MED8, Description = Mediator of RNA polymerase II transcription subunit 8, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13530_72033-74182' ' no hits & (original description: Putative RTFL17, Description = At1g13245, PFAM = PF08137)' T '35.2' 'not assigned.unknown' 'niben101scf13530_123951-132545' '(at3g02410 : 565.0) Isoprenylcysteine methylesterase-like 2 (ICME-LIKE2); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Carboxylesterase type B, active site (InterPro:IPR019826), Carboxylesterase, type B (InterPro:IPR002018), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: prenylcysteine methylesterase (TAIR:AT5G15860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31002 : 85.0) no description available & (reliability: 1130.0) & (original description: Putative ICMEL2, Description = Probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL2, PFAM = PF00135)' T '35.2' 'not assigned.unknown' 'niben101scf13556_13199-15609' ' no hits & (original description: Putative PSK4, Description = Putative phytosulfokine peptide, PFAM = PF06404)' T '35.2' 'not assigned.unknown' 'niben101scf13558_170940-174535' '(at5g20935 : 122.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3148 (InterPro:IPR021495); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative , Description = TIR-NBS-LRR type disease resistance protein, putative, PFAM = PF11347)' T '35.2' 'not assigned.unknown' 'niben101scf13571_465055-474163' '(at1g24350 : 216.0) Acid phosphatase/vanadium-dependent haloperoxidase-related protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: Acid phosphatase/vanadium-dependent haloperoxidase-related protein (TAIR:AT1G67600.1). & (gnl|cdd|32146 : 156.0) no description available & (reliability: 432.0) & (original description: Putative tll0019, Description = Tll0019 protein, PFAM = PF02681)' T '35.2' 'not assigned.unknown' 'niben101scf13571_487356-489790' ' no hits & (original description: Putative , Description = Polyprotein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13595_191646-198249' '(at2g46550 : 197.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01240.3). & (reliability: 394.0) & (original description: Putative BnaC05g00690D, Description = BnaC05g00690D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13595_216029-219841' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF05097)' T '35.2' 'not assigned.unknown' 'niben101scf13622_94361-101415' '(at1g62330 : 676.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G11990.1); Has 815 Blast hits to 808 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 815; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|66790 : 437.0) no description available & (reliability: 1352.0) & (original description: Putative At1g62330, Description = O-fucosyltransferase family protein, PFAM = PF10250)' T '35.2' 'not assigned.unknown' 'niben101scf13622_108609-111682' ' no hits & (original description: Putative , Description = , PFAM = PF15264)' T '35.2' 'not assigned.unknown' 'niben101scf13622_203360-205962' ' (original description: Putative Sb0010s022250, Description = Putative uncharacterized protein Sb0010s022250, PFAM = PF05970)' T '35.2' 'not assigned.unknown' 'niben101scf13640_167158-172147' '(at4g19645 : 295.0) TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT1G31300.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69487 : 266.0) no description available & (gnl|cdd|39761 : 165.0) no description available & (reliability: 590.0) & (original description: Putative TdLFC39, Description = Putative TdLFC39 protein, PFAM = PF03798)' T '35.2' 'not assigned.unknown' 'niben101scf13643_155716-158360' '(at4g28310 : 101.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 202.0) & (original description: Putative PGSC0003DMG400013144, Description = Os06g0115700 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13643_167591-170379' ' no hits & (original description: Putative Os08g0374000, Description = Os08g0374000 protein, PFAM = PF00407)' T '35.2' 'not assigned.unknown' 'niben101scf13666_11819-15047' '(at3g15750 : 105.0) Essential protein Yae1, N-terminal; CONTAINS InterPro DOMAIN/s: Essential protein Yae1, N-terminal (InterPro:IPR019191); BEST Arabidopsis thaliana protein match is: Essential protein Yae1, N-terminal (TAIR:AT1G34570.1); Has 133 Blast hits to 133 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 50; Fungi - 20; Plants - 55; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative , Description = , PFAM = PF09811)' T '35.2' 'not assigned.unknown' 'niben101scf13676_124691-126996' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Putative reverse transcriptase family member, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13680_35425-42870' '(at3g51650 : 477.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51640.1); Has 27645 Blast hits to 15097 proteins in 1246 species: Archae - 44; Bacteria - 3367; Metazoa - 10036; Fungi - 2690; Plants - 1205; Viruses - 196; Other Eukaryotes - 10107 (source: NCBI BLink). & (reliability: 954.0) & (original description: Putative BnaA09g32170D, Description = BnaA09g32170D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13680_347373-350036' ' (original description: Putative LE16, Description = Non-specific lipid-transfer protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13683_229830-234530' '(gnl|cdd|66792 : 234.0) no description available & (at3g50130 : 168.0) Plant protein of unknown function (DUF247); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: leaf apex, root, flower, carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50140.1); Has 12220 Blast hits to 6577 proteins in 475 species: Archae - 26; Bacteria - 903; Metazoa - 4175; Fungi - 967; Plants - 4043; Viruses - 563; Other Eukaryotes - 1543 (source: NCBI BLink). & (reliability: 336.0) & (original description: Putative PGSC0003DMG400008157, Description = DUF247 domain protein, PFAM = PF03140)' T '35.2' 'not assigned.unknown' 'niben101scf13684_117048-120988' '(at1g11120 : 113.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28170.1); Has 94 Blast hits to 94 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 226.0) & (original description: Putative At1g11120, Description = Putative CTTNBP2 N-terminal-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13694_46233-50172' '(gnl|cdd|68069 : 199.0) no description available & (at2g44190 : 197.0) Encodes a novel microtubule binding protein that preferentially associates with nuclear microtubules during mitosis and is essential during the mitotic and cytokinetic stages that generate the endosperm and embryo.; ENDOSPERM DEFECTIVE 1 (EDE1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 (InterPro:IPR007573); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) (TAIR:AT3G60000.2); Has 456 Blast hits to 444 proteins in 94 species: Archae - 0; Bacteria - 6; Metazoa - 141; Fungi - 55; Plants - 202; Viruses - 3; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative EDE1, Description = Protein EMBRYO DEFECTIVE 3116, PFAM = PF04484)' T '35.2' 'not assigned.unknown' 'niben101scf13695_195446-197979' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf13741_16476-24771' '(at5g45030 : 712.0) Trypsin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003); BEST Arabidopsis thaliana protein match is: Trypsin family protein (TAIR:AT2G35155.1); Has 134 Blast hits to 134 proteins in 31 species: Archae - 0; Bacteria - 55; Metazoa - 0; Fungi - 0; Plants - 79; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1424.0) & (original description: Putative F383_17854, Description = Metal-dependent hydrolase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13741_63811-66367' ' no hits & (original description: Putative At3g12955, Description = At3g12955, PFAM = PF02519)' T '35.2' 'not assigned.unknown' 'niben101scf13741_119367-123004' ' no hits & (original description: Putative PGSC0003DMG400009783, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13741_277328-279843' ' no hits & (original description: Putative zfp1, Description = Zinc finger, C2H2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13741_408530-412611' '(at5g64400 : 98.6) BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT5G09570.1); Has 127 Blast hits to 125 proteins in 40 species: Archae - 0; Bacteria - 9; Metazoa - 16; Fungi - 2; Plants - 64; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (reliability: 197.2) & (original description: Putative , Description = , PFAM = PF06747)' T '35.2' 'not assigned.unknown' 'niben101scf13742_1-2137' '(at4g09550 : 90.9) AtGCP3 interacting protein 1 (GIP1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3743 (InterPro:IPR022214); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3743) (TAIR:AT1G73790.1); Has 222 Blast hits to 222 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 54; Fungi - 64; Plants - 72; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative GIP1, Description = Mitotic-spindle organizing protein 1B, PFAM = PF12554)' T '35.2' 'not assigned.unknown' 'niben101scf13748_73814-77391' '(at3g62920 : 88.6) unknown protein; Has 25 Blast hits to 25 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 177.2) & (original description: Putative Zm.88447, Description = Phototropic-responsive NPH3 family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13762_50385-57307' '(at4g27020 : 825.0) unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1650.0) & (original description: Putative PGSC0003DMG402022324, Description = AT4g27020/F10M23_360, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13762_76238-92942' '(at4g27020 : 869.0) unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1738.0) & (original description: Putative BnaC02g13480D, Description = BnaC02g13480D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13762_309694-319455' '(at5g54920 : 145.0) unknown protein; FUNCTIONS IN: molecular_function unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative , Description = , PFAM = PF14438)' T '35.2' 'not assigned.unknown' 'niben101scf13764_14905-26394' '(at1g70770 : 529.0) Protein of unknown function DUF2359, transmembrane; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endoplasmic reticulum, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2359, transmembrane (InterPro:IPR019308); BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF2359, transmembrane (TAIR:AT1G23170.2). & (gnl|cdd|39668 : 453.0) no description available & (reliability: 1058.0) & (original description: Putative BnaC06g33180D, Description = BnaC06g33180D protein, PFAM = PF10151)' T '35.2' 'not assigned.unknown' 'niben101scf13773_60583-64201' ' (original description: Putative PGSC0003DMG400000002, Description = Putative vacuolar iron transporter 1.1-like, PFAM = PF01988)' T '35.2' 'not assigned.unknown' 'niben101scf13773_64202-68740' ' (original description: Putative PGSC0003DMG400000002, Description = Putative vacuolar iron transporter 1.1-like, PFAM = PF01988)' T '35.2' 'not assigned.unknown' 'niben101scf13776_5693-10288' '(at2g01340 : 163.0) Encodes a protein whose expression is responsive to nematode infection.; At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, response to nematode; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 110 Blast hits to 110 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 326.0) & (original description: Putative At17.1, Description = At2g01340, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf13776_39989-46184' '(at2g01340 : 154.0) Encodes a protein whose expression is responsive to nematode infection.; At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, response to nematode; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 110 Blast hits to 110 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 308.0) & (original description: Putative At1g66480, Description = At2g01340, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf13776_90539-99275' '(at3g01720 : 1146.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 374 Blast hits to 211 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 316; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 2292.0) & (original description: Putative SGT1, Description = Peptidyl serine alpha-galactosyltransferase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13776_102706-110452' ' no hits & (original description: Putative syc1174_c, Description = Uncharacterized lipoprotein syc1174_c, PFAM = PF11805)' T '35.2' 'not assigned.unknown' 'niben101scf13776_332258-335346' '(at5g40940 : 112.0) putative fasciclin-like arabinogalactan protein 20 (FLA20); CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative PGSC0003DMG400030506, Description = Fasciclin-like arabinogalactan protein 20, PFAM = PF02469)' T '35.2' 'not assigned.unknown' 'niben101scf13842_158407-160718' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf13843_68861-75371' '(at4g39860 : 213.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G22270.1); Has 148 Blast hits to 144 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative T5J17.30, Description = Putative uncharacterized protein AT4g39860, PFAM = PF13266;PF13266)' T '35.2' 'not assigned.unknown' 'niben101scf13856_78050-85757' '(at3g52610 : 448.0) unknown protein; Has 68 Blast hits to 67 proteins in 21 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 896.0) & (original description: Putative Ccrd_018148, Description = Alcohol acetyltransferase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13863_39748-42744' '(at5g24860 : 134.0) encodes a small protein of 12.6 kDa that regulates flowering and is involved in gibberellin signalling pathway. It is expressed in apical meristems immediately after the photoperiodic induction of flowering. Genetic interactions with flowering time and floral organ identity genes suggest that this gene may be involved in modulating the competence to flower. There are two other genes similar to FPF1, FLP1 (At4g31380) and FLP2 (no locus name yet, on BAC F8F16 on chr 4). This is so far a plant-specific gene and is only found in long-day mustard, arabidopsis, and rice.; FLOWERING PROMOTING FACTOR 1 (FPF1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to gibberellin stimulus, positive regulation of flower development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10625.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative F6A4, Description = AtFPF1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13874_30370-32642' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf13916_24748-32036' '(at3g26410 : 700.0) methyltransferases;nucleic acid binding; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Putative RNA methylase (InterPro:IPR000241), tRNA guanosine-2'-O-methyltransferase, TRM11 (InterPro:IPR016691), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052); Has 597 Blast hits to 588 proteins in 280 species: Archae - 150; Bacteria - 5; Metazoa - 158; Fungi - 132; Plants - 50; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (gnl|cdd|37882 : 530.0) no description available & (gnl|cdd|31243 : 137.0) no description available & (reliability: 1400.0) & (original description: Putative TRMT11, Description = tRNA (guanine(10)-N2)-methyltransferase homolog, PFAM = PF01170)' T '35.2' 'not assigned.unknown' 'niben101scf13916_145062-148384' ' no hits & (original description: Putative PGSC0003DMG400024171, Description = , PFAM = PF00642)' T '35.2' 'not assigned.unknown' 'niben101scf13934_1-6984' '(at4g17486 : 234.0) PPPDE putative thiol peptidase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT5G47310.1); Has 871 Blast hits to 871 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 234; Fungi - 89; Plants - 366; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (gnl|cdd|35545 : 209.0) no description available & (gnl|cdd|69428 : 168.0) no description available & (reliability: 468.0) & (original description: Putative At4g17486, Description = DeSI-like protein At4g17486, PFAM = PF05903)' T '35.2' 'not assigned.unknown' 'niben101scf13942_46951-54239' '(at5g12950 : 1141.0) FUNCTIONS IN: catalytic activity; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: stem, male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1680 (InterPro:IPR012878), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Putative glycosyl hydrolase of unknown function (DUF1680) (TAIR:AT5G12960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|71381 : 475.0) no description available & (reliability: 2282.0) & (original description: Putative Sb04g006520, Description = Putative uncharacterized protein Sb04g006520, PFAM = PF07944)' T '35.2' 'not assigned.unknown' 'niben101scf13950_10784-15054' '(at1g79200 : 90.9) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative PGSC0003DMG400030526, Description = Epstein-Barr virus EBNA-1-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf13950_15446-26972' ' no hits & (original description: Putative LBP, Description = Lipid binding/ Lipid transporter protein, PFAM = PF14368)' T '35.2' 'not assigned.unknown' 'niben101scf13971_152881-155327' ' (original description: Putative BnaA02g05020D, Description = BnaA02g05020D protein, PFAM = PF07911)' T '35.2' 'not assigned.unknown' 'niben101scf14009_103278-106663' '(at5g40470 : 216.0) RNI-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT4G15475.1); Has 2544 Blast hits to 1647 proteins in 181 species: Archae - 0; Bacteria - 22; Metazoa - 1074; Fungi - 251; Plants - 934; Viruses - 0; Other Eukaryotes - 263 (source: NCBI BLink). & (reliability: 432.0) & (original description: Putative KK1_033024, Description = SCF E3 ubiquitin ligase complex F-box protein grrA, PFAM = PF13516;PF00646)' T '35.2' 'not assigned.unknown' 'niben101scf14009_120621-127083' '(at5g14020 : 400.0) Endosomal targeting BRO1-like domain-containing protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: vacuole; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); BEST Arabidopsis thaliana protein match is: Endosomal targeting BRO1-like domain-containing protein (TAIR:AT1G73390.3); Has 94 Blast hits to 94 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 800.0) & (original description: Putative pco104060, Description = Endosomal targeting BRO1-like domain-containing protein, PFAM = PF03097)' T '35.2' 'not assigned.unknown' 'niben101scf14009_196192-219251' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf14009_261315-263632' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf14012_221922-224255' ' no hits & (original description: Putative PGSC0003DMG400003969, Description = , PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'niben101scf14036_2947-8319' ' no hits & (original description: Putative PGSC0003DMG400004782, Description = Lipid transfer-like protein VAS-like isoform 2, PFAM = PF14368)' T '35.2' 'not assigned.unknown' 'niben101scf14069_27961-31743' ' no hits & (original description: Putative , Description = , PFAM = PF12734)' T '35.2' 'not assigned.unknown' 'niben101scf14070_17373-19328' ' no hits & (original description: Putative PGSC0003DMG400024162, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf14070_18906-23842' '(at4g17540 : 134.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative Sb01g028860, Description = Putative uncharacterized protein Sb01g028860, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf14079_14038-20187' '(at4g14385 : 100.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf6 (InterPro:IPR015418); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72755 : 98.8) no description available & (reliability: 200.0) & (original description: Putative EAF6, Description = Histone acetyltransferase subunit NuA4-domain containing protein, PFAM = PF09340)' T '35.2' 'not assigned.unknown' 'niben101scf14083_169436-179982' '(at1g32730 : 242.0) unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF702 (InterPro:IPR007818); Has 120 Blast hits to 118 proteins in 39 species: Archae - 0; Bacteria - 8; Metazoa - 63; Fungi - 4; Plants - 33; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 484.0) & (original description: Putative BnaC05g24820D, Description = BnaC05g24820D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf14101_196216-198734' ' no hits & (original description: Putative orf173, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf14115_133217-135671' ' no hits & (original description: Putative PGSC0003DMG400019390, Description = Glutathione reductase, cytosolic, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf14118_73926-77179' ' no hits & (original description: Putative PGSC0003DMG400014551, Description = Copper-binding periplasmic protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf14121_50064-54847' ' no hits & (original description: Putative SlSRG1, Description = Putative uncharacterized protein Sb02g025720, PFAM = PF09425;PF06200)' T '35.2' 'not assigned.unknown' 'niben101scf14144_139727-142224' ' no hits & (original description: Putative HM01045, Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf14151_1354-4535' '(at5g58020 : 288.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF602 (InterPro:IPR006735); Has 385 Blast hits to 385 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 117; Plants - 50; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (gnl|cdd|38323 : 243.0) no description available & (gnl|cdd|68221 : 221.0) no description available & (reliability: 576.0) & (original description: Putative At5g58020, Description = At5g58020, PFAM = PF04641)' T '35.2' 'not assigned.unknown' 'niben101scf14151_24723-30081' ' no hits & (original description: Putative PGSC0003DMG400006581, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf14156_6499-15014' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf14166_21914-35736' '(at2g32280 : 167.0) Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT4G21310.1); Has 170 Blast hits to 169 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70227 : 80.7) no description available & (reliability: 334.0) & (original description: Putative At2g32280, Description = At2g32280, PFAM = PF06749)' T '35.2' 'not assigned.unknown' 'niben101scf14210_40367-42726' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf14233_59066-64102' '(at3g21000 : 86.3) Gag-Pol-related retrotransposon family protein; BEST Arabidopsis thaliana protein match is: Gag-Pol-related retrotransposon family protein (TAIR:AT3G20980.1); Has 830 Blast hits to 808 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 29; Fungi - 57; Plants - 743; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 172.6) & (original description: Putative TnInt1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = PF14223)' T '35.2' 'not assigned.unknown' 'niben101scf14233_95986-104944' '(at5g61910 : 153.0) DCD (Development and Cell Death) domain protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 membrane targeting protein (InterPro:IPR018029), Kelch related (InterPro:IPR013089), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Calcium-dependent phospholipid-binding Copine family protein (TAIR:AT5G61900.3). & (p37707|b2_dauca : 83.2) B2 protein - Daucus carota (Carrot) & (reliability: 306.0) & (original description: Putative , Description = DCD domain protein, putative isoform 1, PFAM = PF10539;PF10539)' T '35.2' 'not assigned.unknown' 'niben101scf14262_67894-75442' '(at3g49250 : 407.0) Similar to hinge-domain region of structural maintenance of chromosomes (SMC)proteins.Putative chromosome architecture protein that can potentialy link nucleic acids in facilitating an RNA1-mediated epigenetic modification involving secondary siRNA and spreading of DNA methylation.; DEFECTIVE IN MERISTEM SILENCING 3 (DMS3); BEST Arabidopsis thaliana protein match is: gamma-irradiation and mitomycin c induced 1 (TAIR:AT5G24280.1); Has 82 Blast hits to 81 proteins in 17 species: Archae - 6; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 814.0) & (original description: Putative DMS3, Description = Protein DEFECTIVE IN MERISTEM SILENCING 3, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf14273_55171-57548' '(at2g17705 : 192.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08330.1); Has 135 Blast hits to 135 proteins in 32 species: Archae - 5; Bacteria - 29; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 384.0) & (original description: Putative Os03g0136500, Description = Expressed protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf14274_88960-93813' '(at4g29310 : 505.0) Protein of unknown function (DUF1005); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1005 (InterPro:IPR010410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1005) (TAIR:AT1G10020.1); Has 138 Blast hits to 138 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|69725 : 215.0) no description available & (reliability: 1010.0) & (original description: Putative At4g29310, Description = Putative uncharacterized protein AT4g29310, PFAM = PF06219)' T '35.2' 'not assigned.unknown' 'niben101scf14282_8301-14335' '(at5g49710 : 222.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24590.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 444.0) & (original description: Putative BnaC07g39040D, Description = BnaC07g39040D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf14282_14342-32677' '(at4g24610 : 1408.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65440.1). & (reliability: 2816.0) & (original description: Putative TCM_001001, Description = Ribosomal protein L10 family protein isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf14294_129548-136478' ' no hits & (original description: Putative , Description = , PFAM = PF00646)' T '35.2' 'not assigned.unknown' 'niben101scf14299_130278-134199' '(at4g38090 : 315.0) Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0029, Impact, N-terminal (InterPro:IPR001498), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568). & (gnl|cdd|38509 : 163.0) no description available & (gnl|cdd|31925 : 154.0) no description available & (reliability: 630.0) & (original description: Putative yigZ, Description = Thymidylate synthase, PFAM = PF01205)' T '35.2' 'not assigned.unknown' 'niben101scf14299_169273-182133' '(at4g24610 : 1217.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65440.1). & (reliability: 2434.0) & (original description: Putative TCM_001001, Description = Ribosomal protein L10 family protein isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf14299_171756-174890' '(at4g24610 : 221.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65440.1). & (reliability: 442.0) & (original description: Putative At5g48310, Description = BnaA06g30300D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf14320_65524-69294' ' no hits & (original description: Putative PGSC0003DMG400003399, Description = S-norcoclaurine synthase, PFAM = PF00407)' T '35.2' 'not assigned.unknown' 'niben101scf14320_146550-148335' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf14323_283790-286586' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf14323_315212-317520' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf14333_19456-86645' '(at3g53450 : 162.0) Putative lysine decarboxylase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lysine biosynthetic process via diaminopimelate; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 5287 Blast hits to 5285 proteins in 1551 species: Archae - 21; Bacteria - 3653; Metazoa - 10; Fungi - 132; Plants - 402; Viruses - 0; Other Eukaryotes - 1069 (source: NCBI BLink). & (gnl|cdd|86394 : 108.0) no description available & (reliability: 324.0) & (original description: Putative LOG1, Description = Cytokinin riboside 5'-monophosphate phosphoribohydrolase, PFAM = PF03641)' T '35.2' 'not assigned.unknown' 'niben101scf14338_398919-401499' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf14372_80350-83636' ' no hits & (original description: Putative ILI6, Description = AtbHLH163, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf14374_17582-20200' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf14374_110232-114497' ' no hits & (original description: Putative DGAT3, Description = Soluble acyl-CoA:diacylglycerol O-acyltransferase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf14378_188556-194490' '(at1g55325 : 523.0) Encodes the Arabidopsis homolog of the transcriptional regulator MED13, is dynamically expressed during embryogenesis and regulates both developmental timing and the radial pattern formation.; GRAND CENTRAL (GCT); FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of development, heterochronic, regulation of radial pattern formation; LOCATED IN: mediator complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med13 (InterPro:IPR009401). & (reliability: 1046.0) & (original description: Putative GCT, Description = Mediator of RNA polymerase II transcription subunit 13, PFAM = PF06333)' T '35.2' 'not assigned.unknown' 'niben101scf14440_30565-32921' ' no hits & (original description: Putative HM01045, Description = Endonuclease-reverse transcriptase HmRTE-e01, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf14459_74459-80334' '(at2g44600 : 156.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G60200.1); Has 56 Blast hits to 55 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 312.0) & (original description: Putative At2g44600, Description = At2g44600/F16B22.9, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf14470_98483-101367' ' no hits & (original description: Putative PGSC0003DMG400021282, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf14470_147948-150331' ' no hits & (original description: Putative HLH1, Description = AtbHLH165, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf14513_81389-83661' ' no hits & (original description: Putative TCM_000747, Description = Late embryogenesis abundant protein group 8 protein, putative, PFAM = PF10714)' T '35.2' 'not assigned.unknown' 'niben101scf14513_100136-103140' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf14518_50365-81679' '(at2g01690 : 1029.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), Protein of unknown function DUF3434 (InterPro:IPR021841), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35433 : 761.0) no description available & (reliability: 2058.0) & (original description: Putative VAC14, Description = Protein VAC14 homolog, PFAM = PF12755;PF11916)' T '35.2' 'not assigned.unknown' 'niben101scf14526_171590-174177' '(gnl|cdd|68427 : 229.0) no description available & (at2g42610 : 214.0) LIGHT SENSITIVE HYPOCOTYLS 10 (LSH10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT1G07090.1); Has 309 Blast hits to 309 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 428.0) & (original description: Putative LSH8, Description = Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 8, PFAM = PF04852)' T '35.2' 'not assigned.unknown' 'niben101scf14526_234250-238106' '(at3g14920 : 620.0) Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A (InterPro:IPR021102); BEST Arabidopsis thaliana protein match is: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein (TAIR:AT5G05480.1); Has 261 Blast hits to 247 proteins in 94 species: Archae - 30; Bacteria - 27; Metazoa - 0; Fungi - 111; Plants - 90; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 1240.0) & (original description: Putative At3g14920, Description = Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A, PFAM = PF12222)' T '35.2' 'not assigned.unknown' 'niben101scf14538_13574-16422' ' no hits & (original description: Putative , Description = Putative HBS1-like protein-like, PFAM = PF00641)' T '35.2' 'not assigned.unknown' 'niben101scf14542_57192-59566' '(at2g43310 : 102.0) Ribosomal L18p/L5e family protein; Has 17 Blast hits to 17 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) & (original description: Putative At2g43310, Description = F14B2.25/F14B2.25, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf14566_12806-19579' '(gnl|cdd|68069 : 228.0) no description available & (at2g24070 : 196.0) Family of unknown function (DUF566) ; LOCATED IN: chloroplast; EXPRESSED IN: shoot apex, inflorescence meristem, root, flower, carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 (InterPro:IPR007573); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) (TAIR:AT4G30710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 392.0) & (original description: Putative 39661, Description = AUGMIN subunit 8, PFAM = PF04484)' T '35.2' 'not assigned.unknown' 'niben101scf14566_14057-17833' ' (original description: Putative , Description = Predicted protein, PFAM = PF04484;PF04484)' T '35.2' 'not assigned.unknown' 'niben101scf14591_6372-9889' '(at4g18590 : 142.0) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Replication factor A protein 3 (InterPro:IPR013970), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT3G52630.2); Has 94 Blast hits to 94 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 2; Plants - 56; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (gnl|cdd|72086 : 84.1) no description available & (reliability: 284.0) & (original description: Putative RPA3B, Description = Replication protein A 14 kDa subunit B, PFAM = PF08661)' T '35.2' 'not assigned.unknown' 'niben101scf14591_179213-182085' '(at2g36220 : 122.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52710.1); Has 74 Blast hits to 74 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative At2g36220, Description = At2g36220/F2H17.17, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf14592_78451-82218' '(at3g54000 : 104.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 208.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf14606_251288-254682' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf14625_155450-184312' '(at2g27900 : 1178.0) CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38150 : 258.0) no description available & (reliability: 2356.0) & (original description: Putative , Description = , PFAM = PF10474;PF10475)' T '35.2' 'not assigned.unknown' 'niben101scf14636_29157-41038' ' no hits & (original description: Putative GATA5, Description = GATA transcription factor-like protein, PFAM = PF00320)' T '35.2' 'not assigned.unknown' 'niben101scf14636_38709-41106' ' no hits & (original description: Putative GATA5, Description = GATA transcription factor-like protein, PFAM = PF00320)' T '35.2' 'not assigned.unknown' 'niben101scf14636_331439-338080' '(at2g01080 : 222.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT2G27080.2); Has 675 Blast hits to 674 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 673; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|70773 : 85.7) no description available & (reliability: 444.0) & (original description: Putative Os03g0262700, Description = Harpin-induced protein 1 containing protein, expressed, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'niben101scf14639_14448-17500' '(at3g25590 : 105.0) unknown protein; Has 149 Blast hits to 140 proteins in 44 species: Archae - 0; Bacteria - 6; Metazoa - 40; Fungi - 6; Plants - 39; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative , Description = Acylamino-acid-releasing enzyme, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf14650_67139-70130' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf14662_2325-9802' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf14669_15434-22599' '(at4g32350 : 189.0) Regulator of Vps4 activity in the MVB pathway protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061); BEST Arabidopsis thaliana protein match is: Regulator of Vps4 activity in the MVB pathway protein (TAIR:AT1G79910.1); Has 2836 Blast hits to 2289 proteins in 246 species: Archae - 0; Bacteria - 95; Metazoa - 1034; Fungi - 145; Plants - 397; Viruses - 5; Other Eukaryotes - 1160 (source: NCBI BLink). & (gnl|cdd|37238 : 138.0) no description available & (gnl|cdd|67036 : 119.0) no description available & (reliability: 378.0) & (original description: Putative BnaA07g35910D, Description = BnaA07g35910D protein, PFAM = PF03398)' T '35.2' 'not assigned.unknown' 'niben101scf14688_12887-27565' '(at5g25360 : 152.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1). & (reliability: 304.0) & (original description: Putative At3g15770, Description = AT3G15770 protein, PFAM = PF13259;PF13259)' T '35.2' 'not assigned.unknown' 'niben101scf14688_337807-345418' '(at4g32330 : 136.0) TPX2 (targeting protein for Xklp2) protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT2G25480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative WDL6, Description = Protein WVD2-like 6, PFAM = PF06886)' T '35.2' 'not assigned.unknown' 'niben101scf14714_46711-53957' '(at2g26810 : 314.0) Putative methyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G26200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 628.0) & (original description: Putative At2g26810, Description = Putative methyltransferase family protein, PFAM = PF10294)' T '35.2' 'not assigned.unknown' 'niben101scf14714_94073-97152' ' no hits & (original description: Putative , Description = , PFAM = PF07816)' T '35.2' 'not assigned.unknown' 'niben101scf14726_38511-47222' '(at5g58600 : 462.0) Belongs to a large family of plant-specific genes of unknown function. Involved in resistance to the powdery mildew species Erysiphe cichoracearum and Erysiphe orontii, but not to the unrelated pathogens Pseudomonas syringae or Peronospora parasitica. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; POWDERY MILDEW RESISTANT 5 (PMR5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 45 (TAIR:AT2G30010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72785 : 182.0) no description available & (reliability: 924.0) & (original description: Putative TBL45, Description = Protein trichome birefringence-like 45, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf14799_36985-42569' '(at3g01060 : 629.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1258.0) & (original description: Putative At3g01060, Description = Putative uncharacterized protein At3g01060, PFAM = PF14234)' T '35.2' 'not assigned.unknown' 'niben101scf14805_286723-289118' ' no hits & (original description: Putative , Description = , PFAM = PF13963)' T '35.2' 'not assigned.unknown' 'niben101scf14814_167664-170587' '(at3g51510 : 160.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative PHYPADRAFT_18616, Description = Predicted protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf14814_170315-173055' ' (original description: Putative At3g43630, Description = BnaA06g14970D protein, PFAM = PF01988)' T '35.2' 'not assigned.unknown' 'niben101scf14883_292614-295364' ' (original description: Putative , Description = Reverse transcriptase, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf14883_310171-316267' '(at4g10300 : 171.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Protein of unknown function DUF861, cupin-3 (InterPro:IPR008579), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04300.1); Has 485 Blast hits to 485 proteins in 129 species: Archae - 0; Bacteria - 243; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (gnl|cdd|69424 : 95.7) no description available & (reliability: 342.0) & (original description: Putative At4g10300, Description = RmlC-like cupins superfamily protein, PFAM = PF05899)' T '35.2' 'not assigned.unknown' 'niben101scf14900_19317-27976' '(at4g24610 : 661.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65440.1). & (reliability: 1322.0) & (original description: Putative At5g48310, Description = BnaA06g30300D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf14939_81812-85483' '(at3g27130 : 122.0) BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G27120.1); Has 20 Blast hits to 20 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative glysoja_049112, Description = Fidgetin-like protein 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf14950_24129-27285' '(at1g10380 : 286.0) Putative membrane lipoprotein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 280 Blast hits to 279 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 280; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 572.0) & (original description: Putative At1g10380, Description = At1g10380/F14N23_32, PFAM = PF13947;PF14380)' T '35.2' 'not assigned.unknown' 'niben101scf14958_1-3350' '(at4g33495 : 553.0) A member of the RPD gene family - there are13 annotated genes and one EST encoding RPD1-like proteins in Arabidopsis. Shows no homology to any protein of known function. Abundant expression found in the shoot apex and the root. rpd1 mutant is a temperature-sensitive mutant isolated on the basis of the impairment in adventitious roots formation in hypocotyl region. Also, disruption of the RPD1 gene by a T-DNA insertion caused embryogenesis arrest at the globular to transition stages. This phenotype is consistent with the hypothesized function of RPD1 in the maintenance of active cell proliferation.; ROOT PRIMORDIUM DEFECTIVE 1 (RPD1); CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant (InterPro:IPR021099); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein (TAIR:AT5G45790.2); Has 413 Blast hits to 409 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 413; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1106.0) & (original description: Putative RPD1, Description = Protein ROOT PRIMORDIUM DEFECTIVE 1, PFAM = PF11955)' T '35.2' 'not assigned.unknown' 'niben101scf14958_7614-17235' '(at3g48710 : 202.0) DEK domain-containing chromatin associated protein; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: DEK domain-containing chromatin associated protein (TAIR:AT5G63550.2); Has 53243 Blast hits to 30328 proteins in 1615 species: Archae - 67; Bacteria - 9231; Metazoa - 21090; Fungi - 5394; Plants - 2191; Viruses - 327; Other Eukaryotes - 14943 (source: NCBI BLink). & (gnl|cdd|37477 : 114.0) no description available & (reliability: 404.0) & (original description: Putative Os01g0924900, Description = Os01g0924900 protein, PFAM = PF08766)' T '35.2' 'not assigned.unknown' 'niben101scf14977_95160-100418' '(at5g26749 : 105.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, U1-C type (InterPro:IPR013085), Zinc finger, U1-type (InterPro:IPR003604). & (reliability: 210.0) & (original description: Putative Os01g0252200, Description = Zinc finger CCCH domain-containing protein 3, PFAM = PF06220;PF00642)' T '35.2' 'not assigned.unknown' 'niben101scf14989_54926-60260' '(at5g63480 : 107.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative MED30, Description = Mediator of RNA polymerase II transcription subunit 30, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf15047_47560-53564' '(at5g11780 : 190.0) unknown protein; Has 37 Blast hits to 37 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 380.0) & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf15054_329637-340375' '(at1g27385 : 83.2) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454); Has 79 Blast hits to 79 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 166.4) & (original description: Putative , Description = , PFAM = PF04359)' T '35.2' 'not assigned.unknown' 'niben101scf15054_345066-348426' '(at1g27385 : 149.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454); Has 79 Blast hits to 79 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 298.0) & (original description: Putative Os02g0507400, Description = Os02g0507400 protein, PFAM = PF04359)' T '35.2' 'not assigned.unknown' 'niben101scf15095_45453-48388' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf15100_4064-7751' '(at5g08240 : 93.6) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23160.1); Has 69 Blast hits to 69 proteins in 10 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 187.2) & (original description: Putative PGSC0003DMG400032563, Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf15120_38030-44661' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf15166_393604-402511' '(at4g26550 : 270.0) Got1/Sft2-like vescicle transport protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Got1/SFT2-like (InterPro:IPR007305), Vesicle transport protein, SFT2-like (InterPro:IPR011691); BEST Arabidopsis thaliana protein match is: Got1/Sft2-like vescicle transport protein family (TAIR:AT5G56020.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38098 : 154.0) no description available & (gnl|cdd|71211 : 93.7) no description available & (reliability: 540.0) & (original description: Putative At4g26550, Description = At4g26550, PFAM = PF04178)' T '35.2' 'not assigned.unknown' 'niben101scf15192_37846-53604' '(at2g30900 : 389.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 43 (TBL43); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 42 (TAIR:AT1G78710.1); Has 1340 Blast hits to 1315 proteins in 29 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 1338; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 153.0) no description available & (reliability: 778.0) & (original description: Putative gal2, Description = Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf15244_13552-17857' '(at4g25030 : 363.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G45410.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 726.0) & (original description: Putative At5g45410, Description = AT5G45410 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf15346_36386-39179' ' no hits & (original description: Putative def7, Description = Defensin, PFAM = PF00304)' T '35.2' 'not assigned.unknown' 'niben101scf15364_69391-75269' '(gnl|cdd|29168 : 146.0) no description available & (at1g77710 : 144.0) CONTAINS InterPro DOMAIN/s: Ubiquitin-like, Ufm1 (InterPro:IPR005375); Has 244 Blast hits to 244 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 149; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (gnl|cdd|38693 : 143.0) no description available & (q94dm8|ufm1_orysa : 141.0) Probable ubiquitin-fold modifier 1 precursor - Oryza sativa (Rice) & (reliability: 288.0) & (original description: Putative pol, Description = Ubiquitin-fold modifier 1, PFAM = PF03671)' T '35.2' 'not assigned.unknown' 'niben101scf15366_86257-88824' ' no hits & (original description: Putative , Description = Retrotransposon gag protein, PFAM = PF13650)' T '35.2' 'not assigned.unknown' 'niben101scf15366_183877-190597' ' no hits & (original description: Putative At3g21710, Description = Melanoma inhibitory activity protein 3, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf15367_9699-12566' ' no hits & (original description: Putative TAS14, Description = Abscisic acid and environmental stress-inducible protein TAS14, PFAM = PF00257)' T '35.2' 'not assigned.unknown' 'niben101scf15381_20060-22834' ' no hits & (original description: Putative , Description = , PFAM = PF13952)' T '35.2' 'not assigned.unknown' 'niben101scf15391_99802-109920' '(at1g70770 : 524.0) Protein of unknown function DUF2359, transmembrane; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endoplasmic reticulum, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2359, transmembrane (InterPro:IPR019308); BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF2359, transmembrane (TAIR:AT1G23170.2). & (gnl|cdd|39668 : 453.0) no description available & (reliability: 1048.0) & (original description: Putative BnaC06g31910D, Description = BnaC06g31910D protein, PFAM = PF10151)' T '35.2' 'not assigned.unknown' 'niben101scf15391_102254-106682' '(at1g70770 : 329.0) Protein of unknown function DUF2359, transmembrane; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endoplasmic reticulum, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2359, transmembrane (InterPro:IPR019308); BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF2359, transmembrane (TAIR:AT1G23170.2). & (gnl|cdd|39668 : 312.0) no description available & (reliability: 658.0) & (original description: Putative At1g70770, Description = Transmembrane protein 214-A family, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf15418_14416-18540' '(at1g71850 : 388.0) Ubiquitin carboxyl-terminal hydrolase family protein; CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant (InterPro:IPR021099); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein (TAIR:AT4G24320.1); Has 758 Blast hits to 736 proteins in 101 species: Archae - 0; Bacteria - 6; Metazoa - 59; Fungi - 84; Plants - 429; Viruses - 8; Other Eukaryotes - 172 (source: NCBI BLink). & (reliability: 776.0) & (original description: Putative PGSC0003DMG400021581, Description = Ubiquitin carboxyl-terminal hydrolase family protein, PFAM = PF11955)' T '35.2' 'not assigned.unknown' 'niben101scf15419_195743-215541' '(at1g55160 : 107.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19530.1); Has 63 Blast hits to 63 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) & (original description: Putative PGSC0003DMG400033640, Description = At1g55160/T7N22.11, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf15424_22103-51549' ' (original description: Putative LgRT8, Description = Reverse transcriptases, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf15425_30131-38338' '(at2g20760 : 159.0) Clathrin light chain protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin light chain (InterPro:IPR000996); BEST Arabidopsis thaliana protein match is: Clathrin light chain protein (TAIR:AT2G40060.1); Has 1791 Blast hits to 1279 proteins in 282 species: Archae - 0; Bacteria - 563; Metazoa - 557; Fungi - 96; Plants - 161; Viruses - 0; Other Eukaryotes - 414 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative At2g20760, Description = Clathrin light chain 1, PFAM = PF01086)' T '35.2' 'not assigned.unknown' 'niben101scf15437_258332-260478' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf15442_19927-22136' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf15480_1-1276' ' (original description: Putative TnInt1, Description = Retrovirus-related Pol polyprotein from transposon TNT 1-94, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf15490_24609-34680' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf15515_108792-124437' '(at3g60660 : 307.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1395 (InterPro:IPR009829); Has 131 Blast hits to 131 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 83; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (gnl|cdd|40029 : 174.0) no description available & (gnl|cdd|87226 : 88.6) no description available & (reliability: 614.0) & (original description: Putative At3g60660, Description = Spindle and kinetochore-associated protein 1 homolog, PFAM = PF07160)' T '35.2' 'not assigned.unknown' 'niben101scf15532_136120-142633' '(at3g20300 : 488.0) Protein of unknown function (DUF3537); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3537 (InterPro:IPR021924); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3537) (TAIR:AT1G50630.1); Has 143 Blast hits to 143 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 976.0) & (original description: Putative MRB1, Description = Putative uncharacterized protein At4g22270, PFAM = PF12056)' T '35.2' 'not assigned.unknown' 'niben101scf15532_253120-259276' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf15533_3402-17478' '(at1g11060 : 565.0) WAPL (Wings apart-like protein regulation of heterochromatin) protein; BEST Arabidopsis thaliana protein match is: WAPL (Wings apart-like protein regulation of heterochromatin) protein (TAIR:AT1G61030.1); Has 319 Blast hits to 253 proteins in 105 species: Archae - 2; Bacteria - 73; Metazoa - 168; Fungi - 7; Plants - 48; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|37363 : 354.0) no description available & (gnl|cdd|87376 : 91.6) no description available & (reliability: 1130.0) & (original description: Putative At1g11060, Description = WAPL (Wings apart-like protein regulation of heterochromatin) protein, PFAM = PF07814)' T '35.2' 'not assigned.unknown' 'niben101scf15538_35596-37470' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf15543_147873-154460' ' (original description: Putative , Description = Kinesin-like protein KIF27, PFAM = PF10343)' T '35.2' 'not assigned.unknown' 'niben101scf15564_265-3209' '(at5g67210 : 305.0) Protein of unknown function (DUF579); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF579 (InterPro:IPR021148), Conserved hypothetical protein CHP01627 (InterPro:IPR006514); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF579) (TAIR:AT3G50220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68247 : 284.0) no description available & (reliability: 610.0) & (original description: Putative Os06g0687600, Description = Cdc2 protein kinases-like, PFAM = PF04669)' T '35.2' 'not assigned.unknown' 'niben101scf15568_47551-56717' ' (original description: Putative Os02g0637000, Description = Putative ripening-related protein 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf15568_56806-61303' ' no hits & (original description: Putative , Description = , PFAM = PF09331)' T '35.2' 'not assigned.unknown' 'niben101scf15579_40699-43718' ' no hits & (original description: Putative PGSC0003DMG402001401, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf15594_8550-11446' ' no hits & (original description: Putative eph, Description = Putative epoxide hydrolase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf15594_38055-52843' '(at1g11060 : 544.0) WAPL (Wings apart-like protein regulation of heterochromatin) protein; BEST Arabidopsis thaliana protein match is: WAPL (Wings apart-like protein regulation of heterochromatin) protein (TAIR:AT1G61030.1); Has 319 Blast hits to 253 proteins in 105 species: Archae - 2; Bacteria - 73; Metazoa - 168; Fungi - 7; Plants - 48; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (gnl|cdd|37363 : 348.0) no description available & (gnl|cdd|87376 : 90.8) no description available & (reliability: 1088.0) & (original description: Putative At1g11060, Description = WAPL (Wings apart-like protein regulation of heterochromatin) protein, PFAM = PF07814)' T '35.2' 'not assigned.unknown' 'niben101scf15604_45574-49363' ' no hits & (original description: Putative Os07g0657600, Description = Os07g0657600 protein, PFAM = PF00730)' T '35.2' 'not assigned.unknown' 'niben101scf15631_14392-20281' ' no hits & (original description: Putative , Description = Transmembrane protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf15631_179916-208280' '(at5g16520 : 693.0) unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1386.0) & (original description: Putative At5g16520, Description = At5g16520, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf15645_304282-307198' '(at5g47740 : 102.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT2G45910.1). & (gnl|cdd|30176 : 92.6) no description available & (reliability: 204.0) & (original description: Putative PGSC0003DMG400026986, Description = Adenine nucleotide alpha hydrolases-like superfamily protein, putative, PFAM = PF00582)' T '35.2' 'not assigned.unknown' 'niben101scf15653_149911-152495' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf15657_326006-329130' '(at3g07470 : 175.0) Protein of unknown function, DUF538; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT3G07460.1); Has 638 Blast hits to 638 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 637; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|86647 : 138.0) no description available & (reliability: 350.0) & (original description: Putative mc304, Description = Uncharacterized protein isoform 1, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben101scf15678_162120-166866' ' no hits & (original description: Putative , Description = Putative cysteine-rich and transmembrane domain-containing protein A-like, PFAM = PF12734)' T '35.2' 'not assigned.unknown' 'niben101scf15694_136990-141563' '(at3g53630 : 153.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18692.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 306.0) & (original description: Putative PGSC0003DMG400008931, Description = BnaC04g27080D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf15723_90320-94376' ' no hits & (original description: Putative ORF40, Description = Putative uncharacterized protein ORF40, PFAM = PF02042)' T '35.2' 'not assigned.unknown' 'niben101scf15724_27725-30248' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf15747_18593-20847' ' no hits & (original description: Putative PGSC0003DMG401022984, Description = At1g30260/F12P21_9, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf15747_50584-53873' ' no hits & (original description: Putative PGSC0003DMG401011202, Description = Putative receptor-like protein kinase-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf15817_93375-101130' '(at3g49725 : 390.0) GTP-binding protein, HflX; FUNCTIONS IN: GTP binding; LOCATED IN: intracellular, chloroplast; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HflX (InterPro:IPR016496), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: GTP-binding protein, HflX (TAIR:AT5G57960.1); Has 11258 Blast hits to 11241 proteins in 2608 species: Archae - 167; Bacteria - 7727; Metazoa - 332; Fungi - 38; Plants - 97; Viruses - 17; Other Eukaryotes - 2880 (source: NCBI BLink). & (gnl|cdd|35631 : 287.0) no description available & (gnl|cdd|32443 : 274.0) no description available & (reliability: 780.0) & (original description: Putative hflX, Description = GTP-binding protein HflX, PFAM = PF16360;PF01926;PF13167)' T '35.2' 'not assigned.unknown' 'niben101scf15823_13828-17145' '(gnl|cdd|69860 : 198.0) no description available & (at4g04360 : 182.0) Protein of unknown function (DUF1068); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1068 (InterPro:IPR010471); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1068) (TAIR:AT2G32580.1); Has 119 Blast hits to 119 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|37034 : 117.0) no description available & (reliability: 364.0) & (original description: Putative At1g05070, Description = At1g05070/T7A14_6, PFAM = PF06364)' T '35.2' 'not assigned.unknown' 'niben101scf15823_29110-55265' '(at2g47300 : 557.0) ribonuclease Ps; FUNCTIONS IN: ribonuclease P activity; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, sperm cell, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: POPLD (InterPro:IPR012590); Has 176 Blast hits to 168 proteins in 87 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 69; Plants - 36; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|80643 : 212.0) no description available & (gnl|cdd|35656 : 151.0) no description available & (reliability: 1114.0) & (original description: Putative pop1, Description = POP1 protein, PFAM = PF08170;PF06978;PF00133)' T '35.2' 'not assigned.unknown' 'niben101scf15824_1409-3684' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf15903_18512-20742' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf15903_132293-139344' '(at5g38200 : 619.0) Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: glutamine metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Peptidase C26 (InterPro:IPR011697), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT1G66860.1); Has 3533 Blast hits to 3529 proteins in 1172 species: Archae - 17; Bacteria - 2871; Metazoa - 1; Fungi - 3; Plants - 53; Viruses - 0; Other Eukaryotes - 588 (source: NCBI BLink). & (gnl|cdd|73285 : 180.0) no description available & (reliability: 1238.0) & (original description: Putative At5g38200, Description = Class I glutamine amidotransferase-like protein, PFAM = PF07722)' T '35.2' 'not assigned.unknown' 'niben101scf15903_139867-149078' '(gnl|cdd|69161 : 350.0) no description available & (at1g15030 : 315.0) Encodes a Cysteine-rich peptide (CRP) family protein; Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT2G01260.1); Has 315 Blast hits to 313 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 311; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 630.0) & (original description: Putative BnaA03g42340D, Description = BnaA03g42340D protein, PFAM = PF05623)' T '35.2' 'not assigned.unknown' 'niben101scf15907_28875-31768' '(gnl|cdd|66742 : 134.0) no description available & (at4g35680 : 126.0) Arabidopsis protein of unknown function (DUF241); LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01590.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 252.0) & (original description: Putative PGSC0003DMG400001543, Description = , PFAM = PF03087)' T '35.2' 'not assigned.unknown' 'niben101scf15907_72349-75212' '(gnl|cdd|66742 : 145.0) no description available & (at4g35690 : 116.0) Arabidopsis protein of unknown function (DUF241); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT4G35710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 232.0) & (original description: Putative MTR_8g074510, Description = DUF241 domain protein, PFAM = PF03087)' T '35.2' 'not assigned.unknown' 'niben101scf15920_63693-67555' '(at3g27320 : 524.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 16 (TAIR:AT5G14310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|36728 : 255.0) no description available & (gnl|cdd|87389 : 173.0) no description available & (q6l545|gid1_orysa : 114.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 1048.0) & (original description: Putative CXE16, Description = Probable carboxylesterase 16, PFAM = PF07859)' T '35.2' 'not assigned.unknown' 'niben101scf15953_202746-205081' ' no hits & (original description: Putative F24J8.11, Description = F24J8.11 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf15965_97123-108802' '(at3g16730 : 453.0) CONTAINS InterPro DOMAIN/s: Non-SMC condensin II complex, subunit H2-like (InterPro:IPR009378); Has 249 Blast hits to 211 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 8; Plants - 30; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (gnl|cdd|37570 : 355.0) no description available & (reliability: 906.0) & (original description: Putative CAPH2, Description = Condensin-2 complex subunit H2, PFAM = PF16858;PF16869;PF06278)' T '35.2' 'not assigned.unknown' 'niben101scf15972_335359-340953' '(at5g61040 : 200.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 400.0) & (original description: Putative PGSC0003DMG400024637, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf15979_133144-138846' '(at5g11420 : 489.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF642 (TAIR:AT5G25460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68437 : 489.0) no description available & (reliability: 978.0) & (original description: Putative BnaC09g45170D, Description = BnaC09g45170D protein, PFAM = PF04862;PF04862)' T '35.2' 'not assigned.unknown' 'niben101scf15995_516314-522033' '(at1g48880 : 438.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 7 (TBL7); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT3G06080.2); Has 1333 Blast hits to 1318 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 1329; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 106.0) no description available & (reliability: 876.0) & (original description: Putative TBL7, Description = Protein trichome berefringence-like 7, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf16010_210354-213570' ' (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf16015_99215-101997' ' no hits & (original description: Putative PGSC0003DMG400031534, Description = , PFAM = PF07172)' T '35.2' 'not assigned.unknown' 'niben101scf16015_477248-484890' ' no hits & (original description: Putative PGSC0003DMG401021870, Description = Salt-inducible protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf16022_102923-105855' '(gnl|cdd|70178 : 276.0) no description available & (at4g22900 : 229.0) Protein of unknown function (DUF1191); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1191 (InterPro:IPR010605); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1191) (TAIR:AT4G11950.1); Has 128 Blast hits to 128 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 6; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative BnaC07g37690D, Description = BnaC07g37690D protein, PFAM = PF06697)' T '35.2' 'not assigned.unknown' 'niben101scf16022_137733-140569' '(atmg00570 : 426.0) encodes a protein of unknown function. The transcript has extensive RNA editing at the 3' end. Protein has orthologous in other plants and sequence is similar to E. coli ORFs orf154 and orf131, both of unknown function. So far, similar proteins are found only in plants and prokaryotes.; Sec-independent periplasmic protein translocase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Sec-independent periplasmic protein translocase (InterPro:IPR002033), Twin arginine-targeting protein translocase, TatC (InterPro:IPR019822). & (p38459|ymf16_marpo : 223.0) Hypothetical tatC-like protein ymf16 (ORF 244) - Marchantia polymorpha (Liverwort) & (gnl|cdd|85108 : 97.5) no description available & (reliability: 852.0) & (original description: Putative mttB, Description = MttB, PFAM = PF00902)' T '35.2' 'not assigned.unknown' 'niben101scf16022_141529-146862' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf16022_240705-244972' '(at4g22920 : 358.0) Similar to the tomato senescence-inducible chloroplast stay-green protein 1. It is upregulated during maximal senescence in the Arabidopsis life cycle, especially in senescent leaves.; NON-YELLOWING 1 (NYE1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chlorophyll catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 716.0) & (original description: Putative SGR, Description = Protein STAY-GREEN, chloroplastic, PFAM = PF12638)' T '35.2' 'not assigned.unknown' 'niben101scf16044_162571-165209' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf16082_168512-171723' '(at3g50340 : 451.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G67020.1); Has 128 Blast hits to 128 proteins in 39 species: Archae - 0; Bacteria - 46; Metazoa - 0; Fungi - 3; Plants - 76; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 902.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf16105_52240-54635' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf16106_80147-82383' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf16148_182850-189236' '(at4g32915 : 133.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of translational fidelity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glu-tRNAGln amidotransferase, C subunit (InterPro:IPR003837); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 266.0) & (original description: Putative GATC, Description = Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial, PFAM = PF02686)' T '35.2' 'not assigned.unknown' 'niben101scf16148_241403-260185' '(at4g32820 : 1222.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); Has 168 Blast hits to 155 proteins in 63 species: Archae - 8; Bacteria - 15; Metazoa - 66; Fungi - 5; Plants - 51; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 2444.0) & (original description: Putative At4g32820, Description = Calcineurin-binding protein cabin-1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf16165_5552-7880' ' no hits & (original description: Putative orf112a, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf16206_64346-68998' '(at5g05250 : 138.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf16221_142447-148116' '(at5g20600 : 253.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: preribosome, small subunit precursor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleolar, Nop52 (InterPro:IPR010301); Has 543 Blast hits to 530 proteins in 201 species: Archae - 0; Bacteria - 10; Metazoa - 211; Fungi - 164; Plants - 46; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (gnl|cdd|69517 : 184.0) no description available & (gnl|cdd|39114 : 121.0) no description available & (reliability: 506.0) & (original description: Putative BnaC03g10180D, Description = BnaC03g10180D protein, PFAM = PF05997)' T '35.2' 'not assigned.unknown' 'niben101scf16234_112403-115897' '(at1g11915 : 375.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 261 Blast hits to 261 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 261; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 750.0) & (original description: Putative BnaC05g09810D, Description = BnaC05g09810D protein, PFAM = PF13947)' T '35.2' 'not assigned.unknown' 'niben101scf16234_186732-189199' ' no hits & (original description: Putative , Description = Stigma-specific protein Stig1, PFAM = PF04885)' T '35.2' 'not assigned.unknown' 'niben101scf16236_1050-3694' ' no hits & (original description: Putative PGSC0003DMG400038980, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf16236_32802-35887' '(at4g33890 : 217.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 434.0) & (original description: Putative At2g14850, Description = Putative uncharacterized protein At2g14850, PFAM = PF12767)' T '35.2' 'not assigned.unknown' 'niben101scf16244_71243-73728' ' no hits & (original description: Putative , Description = , PFAM = PF05678)' T '35.2' 'not assigned.unknown' 'niben101scf16244_157237-181648' '(gnl|cdd|69201 : 766.0) no description available & (at5g06970 : 736.0) CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT4G11670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1472.0) & (original description: Putative At5g06970, Description = AT5g06970/MOJ9_14, PFAM = PF05664;PF05664)' T '35.2' 'not assigned.unknown' 'niben101scf16244_311538-318770' '(at3g12300 : 353.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF667 (InterPro:IPR007714); Has 373 Blast hits to 371 proteins in 116 species: Archae - 0; Bacteria - 0; Metazoa - 213; Fungi - 4; Plants - 71; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (gnl|cdd|68587 : 349.0) no description available & (gnl|cdd|38423 : 299.0) no description available & (reliability: 706.0) & (original description: Putative Bug22, Description = Cilia- and flagella-associated protein 20, PFAM = PF05018)' T '35.2' 'not assigned.unknown' 'niben101scf16313_5860-8457' ' no hits & (original description: Putative PGSC0003DMG400007671, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf16313_136142-138884' '(at4g17870 : 259.0) Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.; PYRABACTIN RESISTANCE 1 (PYR1); FUNCTIONS IN: abscisic acid binding; INVOLVED IN: abscisic acid mediated signaling pathway, regulation of protein phosphatase type 2c activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis thaliana protein match is: PYR1-like 1 (TAIR:AT5G46790.1); Has 389 Blast hits to 389 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 389; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 518.0) & (original description: Putative PYR1, Description = Abscisic acid receptor PYR1, PFAM = PF10604)' T '35.2' 'not assigned.unknown' 'niben101scf16332_98338-101697' ' no hits & (original description: Putative PGSC0003DMG400031207, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf16416_291590-294303' '(at5g59350 : 84.3) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 168.6) & (original description: Putative BnaA10g12370D, Description = BnaA10g12370D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf16416_291647-294384' ' no hits & (original description: Putative PGSC0003DMG400008699, Description = BnaA10g12370D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf16451_8875-11141' '(at5g41761 : 80.9) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 161.8) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf16457_56466-60385' '(at5g51920 : 495.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22980.1); Has 991 Blast hits to 937 proteins in 281 species: Archae - 6; Bacteria - 292; Metazoa - 116; Fungi - 152; Plants - 275; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (gnl|cdd|37353 : 307.0) no description available & (reliability: 990.0) & (original description: Putative BnaA02g11150D, Description = BnaA02g11150D protein, PFAM = PF00266)' T '35.2' 'not assigned.unknown' 'niben101scf16516_1-1866' '(at5g19260 : 85.5) Protein of unknown function (DUF3049); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) (TAIR:AT3G06020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative PGSC0003DMG400009028, Description = Uncharacterized protein isoform 1, PFAM = PF11250)' T '35.2' 'not assigned.unknown' 'niben101scf16543_1-3417' ' (original description: Putative Tgt1ORF2, Description = DNA/RNA polymerases superfamily protein, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf16543_889-3474' ' no hits & (original description: Putative PGSC0003DMG400023312, Description = DNA/RNA polymerases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf16551_70376-73179' '(at4g35690 : 125.0) Arabidopsis protein of unknown function (DUF241); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT4G35710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66742 : 122.0) no description available & (reliability: 250.0) & (original description: Putative PGSC0003DMG400001539, Description = DUF241 domain protein, PFAM = PF03087)' T '35.2' 'not assigned.unknown' 'niben101scf16571_63027-65398' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf16706_90501-94260' '(at5g58005 : 155.0) Cytochrome c oxidase, subunit Vib family protein; FUNCTIONS IN: cytochrome-c oxidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIb (InterPro:IPR003213); Has 136 Blast hits to 136 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 50; Fungi - 38; Plants - 46; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative At5g58005, Description = AT5G58005 protein, PFAM = PF02297)' T '35.2' 'not assigned.unknown' 'niben101scf16733_118550-121960' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf16733_137006-141328' ' no hits & (original description: Putative PGSC0003DMG400024621, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf16755_3004-5531' ' no hits & (original description: Putative HM01045, Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf16764_73688-86205' ' no hits & (original description: Putative PGSC0003DMG400023486, Description = Zinc finger, RING/FYVE/PHD-type, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf16768_108971-116680' '(at2g04340 : 170.0) unknown protein; Has 24 Blast hits to 24 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative BnaA07g04600D, Description = BnaA07g04600D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf16812_166157-198443' '(at3g21400 : 159.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 318.0) & (original description: Putative At3g21400, Description = Putative uncharacterized protein At3g21400, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf16812_198962-204441' '(at2g47820 : 335.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09040.1). & (reliability: 670.0) & (original description: Putative PGSC0003DMG400022661, Description = Homeodomain-like protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf16824_26544-29194' '(at3g05980 : 108.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19340.1); Has 202 Blast hits to 202 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 4; Plants - 148; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative At3g05980, Description = At3g05980, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf16915_326230-330364' '(at3g22970 : 303.0) Protein of unknown function (DUF506) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT4G14620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68298 : 217.0) no description available & (reliability: 606.0) & (original description: Putative glysoja_028213, Description = Bifunctional DNA-directed RNA polymerase subunit beta-beta, PFAM = PF04720)' T '35.2' 'not assigned.unknown' 'niben101scf16981_322818-325953' ' no hits & (original description: Putative , Description = , PFAM = PF14111)' T '35.2' 'not assigned.unknown' 'niben101scf16997_7380-9892' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf17044_45504-64839' '(at3g26890 : 310.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41110.1). & (gnl|cdd|37517 : 166.0) no description available & (reliability: 620.0) & (original description: Putative BnaC04g33180D, Description = BnaC04g33180D protein, PFAM = PF13915;PF13889)' T '35.2' 'not assigned.unknown' 'niben101scf17044_198713-205639' '(at3g48770 : 585.0) DNA binding;ATP binding; FUNCTIONS IN: DNA binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, BED-type predicted (InterPro:IPR003656), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28020.1); Has 779 Blast hits to 661 proteins in 171 species: Archae - 6; Bacteria - 159; Metazoa - 152; Fungi - 67; Plants - 310; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (reliability: 1170.0) & (original description: Putative At3g48770, Description = ATP/DNA-binding protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf17044_214762-218229' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf17051_24607-27778' ' (original description: Putative ap2, Description = Ethylene-responsive transcription factor RAP2-11, PFAM = PF00847)' T '35.2' 'not assigned.unknown' 'niben101scf17164_164494-169772' '(at5g62960 : 268.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 536.0) & (original description: Putative At3g27770, Description = AT3g27760/MGF10_16, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf17221_10550-13260' '(at5g66440 : 119.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative PGSC0003DMG400003523, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf17276_172859-175771' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf17301_1-2081' '(at5g65960 : 196.0) GTP binding; FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial Rho-like (InterPro:IPR013684), Alpha/gamma-adaptin-binding protein p34 (InterPro:IPR019341); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|39474 : 174.0) no description available & (reliability: 392.0) & (original description: Putative At5g65960, Description = Alpha/gamma-adaptin-binding protein p34, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf17338_1-990' ' no hits & (original description: Putative orf114d, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf17339_18153-29764' ' no hits & (original description: Putative , Description = , PFAM = PF00255)' T '35.2' 'not assigned.unknown' 'niben101scf17360_12468-15172' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf17368_38018-40765' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf17398_122301-124423' ' no hits & (original description: Putative CPuORF2, Description = Conserved peptide upstream open reading frame 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf17422_101451-104073' '(at3g25545 : 246.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 38 Blast hits to 38 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 492.0) & (original description: Putative At3g25545, Description = AT3g25550/MWL2_17, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf17442_12994-21991' ' no hits & (original description: Putative PGSC0003DMG401027501, Description = Putative suppressor protein SRP40-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf17482_151760-169074' '(at2g30350 : 254.0) Excinuclease ABC, C subunit, N-terminal; FUNCTIONS IN: nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Excinuclease ABC, C subunit, N-terminal (InterPro:IPR000305); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38215 : 153.0) no description available & (reliability: 508.0) & (original description: Putative PGSC0003DMG400020864, Description = Structure-specific endonuclease subunit SLX1 homolog, PFAM = PF01541)' T '35.2' 'not assigned.unknown' 'niben101scf17500_53915-56406' '(at4g29110 : 90.9) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to chitin; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52140.1); Has 109 Blast hits to 109 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 181.8) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf17612_130611-136859' '(at4g15950 : 147.0) Non-catalytic subunit common to Nuclear DNA-dependent RNA polymerases IV and V; homologous to budding yeast RPB4. Role in gene silencing. Required for RNA-directed DNA methylation.; NRPD4; FUNCTIONS IN: DNA-directed RNA polymerase activity, nucleotide binding, catalytic activity; INVOLVED IN: RNA interference, interphase, production of siRNA involved in RNA interference, DNA methylation on cytosine within a CHH sequence; LOCATED IN: DNA-directed RNA polymerase V complex, nucleus, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HRDC-like (InterPro:IPR010997), RNA polymerase II, Rpb4 (InterPro:IPR005574), RNA polymerase II, Rpb4, core (InterPro:IPR006590); BEST Arabidopsis thaliana protein match is: RNA polymerase II, Rpb4, core protein (TAIR:AT5G09920.1); Has 23 Blast hits to 23 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 294.0) & (original description: Putative NRPD4, Description = DNA-directed RNA polymerases IV and V subunit 4, PFAM = PF03874)' T '35.2' 'not assigned.unknown' 'niben101scf17626_30945-38754' '(at3g19220 : 176.0) Encodes a zinc finger protein that is similar to a subgroup of DnaJ and is involved in cotyledon chloroplast biogenesis. Cyo1 is localized to the thylakoid membrane and has protein disulfide isomerase activity in vivo.Cyo1 is more highly expressed in light grown seedlings. Loss of function mutants have albino cotyledons and abnormal plastids.; SNOWY COTYLEDON 2 (SCO2); Has 34 Blast hits to 34 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 352.0) & (original description: Putative CYO1, Description = Protein disulfide-isomerase SCO2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf17635_186801-190830' '(at3g07090 : 343.0) PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT5G25170.1); Has 872 Blast hits to 872 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 235; Fungi - 119; Plants - 332; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink). & (gnl|cdd|69428 : 174.0) no description available & (gnl|cdd|35545 : 160.0) no description available & (reliability: 686.0) & (original description: Putative DESI1, Description = Desumoylating isopeptidase 1, PFAM = PF05903)' T '35.2' 'not assigned.unknown' 'niben101scf17671_23551-31435' '(at5g57880 : 328.0) Encodes MULTIPOLAR SPINDLE 1 (MPS1), involved in meiotic spindle organization.; MULTIPOLAR SPINDLE 1 (MPS1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 656.0) & (original description: Putative MPS1, Description = Multipolar spindle 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf17691_136365-141129' '(at5g06700 : 597.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). A tbr mutant is impaired in its ability to deposit secondary wall cellulose in specific cell types, most notably in trichomes.; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: plant-type cell wall modification, pectin biosynthetic process, cellulose biosynthetic process, secondary cell wall biogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT3G12060.1); Has 18773 Blast hits to 6666 proteins in 584 species: Archae - 22; Bacteria - 3086; Metazoa - 4181; Fungi - 2776; Plants - 1414; Viruses - 506; Other Eukaryotes - 6788 (source: NCBI BLink). & (gnl|cdd|72785 : 185.0) no description available & (reliability: 1194.0) & (original description: Putative TBR, Description = Protein trichome birefringence, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf17701_109994-117403' '(at1g64680 : 306.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits to 146 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 612.0) & (original description: Putative At1g64680, Description = At1g64680, PFAM = PF13225)' T '35.2' 'not assigned.unknown' 'niben101scf17701_123980-127290' '(at5g42090 : 624.0) Lung seven transmembrane receptor family protein; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT5G18520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|37780 : 511.0) no description available & (gnl|cdd|87161 : 142.0) no description available & (reliability: 1248.0) & (original description: Putative v1g87080, Description = Predicted protein, PFAM = PF06814)' T '35.2' 'not assigned.unknown' 'niben101scf17747_66185-68733' ' no hits & (original description: Putative NaP18, Description = , PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'niben101scf17749_71405-73797' ' no hits & (original description: Putative orf58, Description = Orf146 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf17753_101206-110459' '(at5g18400 : 197.0) Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF689 (InterPro:IPR007785); BEST Arabidopsis thaliana protein match is: Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis (TAIR:AT5G18362.1); Has 539 Blast hits to 538 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 183; Fungi - 185; Plants - 75; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (gnl|cdd|68658 : 177.0) no description available & (gnl|cdd|39223 : 109.0) no description available & (reliability: 394.0) & (original description: Putative rsc43, Description = Fe-S cluster assembly protein DRE2 homolog, PFAM = PF05093)' T '35.2' 'not assigned.unknown' 'niben101scf17753_102891-110570' '(at5g18400 : 130.0) Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF689 (InterPro:IPR007785); BEST Arabidopsis thaliana protein match is: Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis (TAIR:AT5G18362.1); Has 539 Blast hits to 538 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 183; Fungi - 185; Plants - 75; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (gnl|cdd|68658 : 120.0) no description available & (reliability: 260.0) & (original description: Putative TCM_004309, Description = Fe-S cluster assembly protein DRE2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf17771_14317-28230' ' (original description: Putative Tag2, Description = AT4g05510 protein, PFAM = PF05699)' T '35.2' 'not assigned.unknown' 'niben101scf17802_315157-317387' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf17819_179496-182110' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf17834_147-7289' '(at5g58250 : 209.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2488 (InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 418.0) & (original description: Putative CGL78, Description = BnaA03g09860D protein, PFAM = PF10674)' T '35.2' 'not assigned.unknown' 'niben101scf17834_121728-135085' '(at4g10360 : 294.0) TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT1G31300.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|69487 : 277.0) no description available & (gnl|cdd|39761 : 155.0) no description available & (reliability: 588.0) & (original description: Putative At4g10360, Description = AT4G10360 protein, PFAM = PF03798)' T '35.2' 'not assigned.unknown' 'niben101scf17855_10740-13132' '(at5g17190 : 172.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 344.0) & (original description: Putative BnaC03g33360D, Description = BnaC03g33360D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf17872_19001-21564' '(gnl|cdd|68427 : 232.0) no description available & (at2g42610 : 229.0) LIGHT SENSITIVE HYPOCOTYLS 10 (LSH10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT1G07090.1); Has 309 Blast hits to 309 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 458.0) & (original description: Putative ELE, Description = Protein ELONGATED EMPTY GLUME, PFAM = PF04852)' T '35.2' 'not assigned.unknown' 'niben101scf17891_355152-357959' '(at5g52900 : 119.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 238.0) & (original description: Putative MAKR6, Description = Probable membrane-associated kinase regulator 6, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf17947_7463-21154' '(at2g42700 : 889.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport, vesicle docking involved in exocytosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619). & (reliability: 1778.0) & (original description: Putative MIP3, Description = Sec1 family domain-containing protein MIP3, PFAM = PF00995)' T '35.2' 'not assigned.unknown' 'niben101scf17947_91200-94084' '(at2g42900 : 151.0) Plant basic secretory protein (BSP) family protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, basic secretory protein (InterPro:IPR007541); Has 52 Blast hits to 52 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68039 : 101.0) no description available & (reliability: 302.0) & (original description: Putative PGSC0003DMG400021284, Description = , PFAM = PF04450)' T '35.2' 'not assigned.unknown' 'niben101scf17988_9637-16619' '(at5g01590 : 659.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 59 proteins in 31 species: Archae - 0; Bacteria - 20; Metazoa - 1; Fungi - 2; Plants - 33; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 1318.0) & (original description: Putative TIC56, Description = Protein TIC 56, chloroplastic, PFAM = PF14237)' T '35.2' 'not assigned.unknown' 'niben101scf17988_25312-28011' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf17988_30506-34003' '(at3g08890 : 241.0) Protein of unknown function, DUF538; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT5G37070.1); Has 520 Blast hits to 520 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 520; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|86647 : 127.0) no description available & (reliability: 482.0) & (original description: Putative BnaA04g21940D, Description = BnaA04g21940D protein, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben101scf17988_52595-59088' '(at2g38320 : 541.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 34 (TBL34); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 35 (TAIR:AT5G01620.2); Has 1346 Blast hits to 1317 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 1344; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|72785 : 202.0) no description available & (reliability: 1082.0) & (original description: Putative TBL34, Description = Protein trichome birefringence-like 34, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf18001_79145-84408' '(at3g48120 : 92.0) unknown protein; Has 22990 Blast hits to 12942 proteins in 666 species: Archae - 8; Bacteria - 739; Metazoa - 13803; Fungi - 2465; Plants - 1363; Viruses - 116; Other Eukaryotes - 4496 (source: NCBI BLink). & (reliability: 184.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf18047_41159-46710' '(at3g60310 : 312.0) unknown protein; Has 22 Blast hits to 18 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 624.0) & (original description: Putative PGSC0003DMG400009724, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf18068_128616-138708' '(at2g38780 : 337.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 58 Blast hits to 58 proteins in 23 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 674.0) & (original description: Putative F383_13784, Description = Alanine--tRNA ligase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf18156_28260-40775' '(at1g33500 : 136.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 272.0) & (original description: Putative BnaA05g17850D, Description = BnaA05g17850D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf18214_1-2312' ' no hits & (original description: Putative SDHAF4, Description = SDH assembly factor 4, PFAM = PF07896)' T '35.2' 'not assigned.unknown' 'niben101scf18273_15295-22708' '(at2g12400 : 563.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25270.1); Has 177 Blast hits to 172 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 1126.0) & (original description: Putative BnaC09g08450D, Description = BnaC09g08450D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf18306_73210-78350' '(at1g32583 : 157.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: tapetum determinant 1 (TAIR:AT4G24972.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 314.0) & (original description: Putative TDL1, Description = TPD1 protein homolog 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf18308_113223-115738' ' no hits & (original description: Putative , Description = DNA/RNA polymerases superfamily protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf18330_21234-37589' '(at4g18530 : 476.0) Protein of unknown function (DUF707); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT4G12840.2); Has 310 Blast hits to 308 proteins in 22 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 303; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68772 : 335.0) no description available & (reliability: 952.0) & (original description: Putative BnaA01g09360D, Description = BnaA01g09360D protein, PFAM = PF05212)' T '35.2' 'not assigned.unknown' 'niben101scf18347_33676-36209' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf18348_32526-38007' '(at1g19360 : 607.0) Nucleotide-diphospho-sugar transferase family protein; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT1G75110.1); Has 297 Blast hits to 291 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 280; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 1214.0) & (original description: Putative RRA3, Description = Arabinosyltransferase RRA3, PFAM = PF03407)' T '35.2' 'not assigned.unknown' 'niben101scf18348_137748-142703' '(at1g47740 : 288.0) PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT5G25170.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35545 : 167.0) no description available & (gnl|cdd|69428 : 112.0) no description available & (reliability: 576.0) & (original description: Putative dl4780c, Description = At5g25170, PFAM = PF05903)' T '35.2' 'not assigned.unknown' 'niben101scf18356_85905-88297' ' no hits & (original description: Putative orf131, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf18401_40147-42254' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf18401_40485-43888' '(at1g58120 : 299.0) BEST Arabidopsis thaliana protein match is: methyltransferases (TAIR:AT5G01710.1); Has 93 Blast hits to 93 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 598.0) & (original description: Putative T18I24.4, Description = Putative uncharacterized protein T18I24.4, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf18639_96096-102064' '(at5g23060 : 427.0) Encodes a chloroplast-localized protein that modulates cytoplasmic Ca2+ concentration and is crucial for proper stomatal regulation in response to elevations of external Ca2+.; calcium sensing receptor (CaS); INVOLVED IN: regulation of stomatal closure, cellular response to calcium ion; LOCATED IN: thylakoid, mitochondrion, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT3G59780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 854.0) & (original description: Putative CAS, Description = Calcium sensing receptor, chloroplastic, PFAM = PF00581)' T '35.2' 'not assigned.unknown' 'niben101scf18643_14425-23343' '(at5g62440 : 139.0) Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division.; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: nucleologenesis, regulation of cell division, embryo development; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3223 (InterPro:IPR021602); Has 1122 Blast hits to 800 proteins in 144 species: Archae - 2; Bacteria - 150; Metazoa - 333; Fungi - 187; Plants - 279; Viruses - 3; Other Eukaryotes - 168 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative EMB514, Description = DUF3223 family protein, PFAM = PF11523)' T '35.2' 'not assigned.unknown' 'niben101scf18662_34722-43023' ' no hits & (original description: Putative At3g01130, Description = ATPase, F0 complex, subunit E, mitochondrial, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf18667_205436-207675' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf18696_29151-33210' '(at3g28630 : 166.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF569 (InterPro:IPR007679), Actin cross-linking (InterPro:IPR008999); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF569) (TAIR:AT3G01311.1); Has 232 Blast hits to 210 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68182 : 162.0) no description available & (reliability: 332.0) & (original description: Putative At1g27100, Description = Actin cross-linking protein, PFAM = PF04601)' T '35.2' 'not assigned.unknown' 'niben101scf18696_39427-43708' '(at3g28630 : 266.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF569 (InterPro:IPR007679), Actin cross-linking (InterPro:IPR008999); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF569) (TAIR:AT3G01311.1); Has 232 Blast hits to 210 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68182 : 215.0) no description available & (reliability: 532.0) & (original description: Putative At1g27100, Description = Actin cross-linking protein, PFAM = PF04601)' T '35.2' 'not assigned.unknown' 'niben101scf18730_66327-74055' '(at2g23390 : 610.0) CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF482 (InterPro:IPR007434), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 2165 Blast hits to 2163 proteins in 543 species: Archae - 0; Bacteria - 1044; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 1088 (source: NCBI BLink). & (gnl|cdd|32960 : 457.0) no description available & (reliability: 1220.0) & (original description: Putative topA, Description = DNA topoisomerase protein, PFAM = PF04339)' T '35.2' 'not assigned.unknown' 'niben101scf18743_33594-36022' ' no hits & (original description: Putative , Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf18745_215734-218538' '(at5g37840 : 143.0) BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 286.0) & (original description: Putative At1g66480, Description = At2g01340, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf18745_265222-275656' '(at3g03341 : 108.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 216.0) & (original description: Putative LP1, Description = Little protein 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf18793_35067-37429' ' no hits & (original description: Putative PGSC0003DMG400010828, Description = , PFAM = PF10950)' T '35.2' 'not assigned.unknown' 'niben101scf18822_98824-104484' '(at4g19160 : 464.0) unknown protein; Has 315 Blast hits to 315 proteins in 152 species: Archae - 0; Bacteria - 250; Metazoa - 2; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 928.0) & (original description: Putative , Description = , PFAM = PF13371;PF13369)' T '35.2' 'not assigned.unknown' 'niben101scf18879_229026-249246' '(at1g49890 : 186.0) Family of unknown function (DUF566) ; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 (InterPro:IPR007573); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) (TAIR:AT3G19570.2); Has 9198 Blast hits to 4153 proteins in 422 species: Archae - 34; Bacteria - 1349; Metazoa - 2630; Fungi - 1436; Plants - 341; Viruses - 197; Other Eukaryotes - 3211 (source: NCBI BLink). & (gnl|cdd|68069 : 155.0) no description available & (reliability: 372.0) & (original description: Putative , Description = Polyribonucleotide nucleotidyltransferase, PFAM = PF04484;PF04484;PF04484)' T '35.2' 'not assigned.unknown' 'niben101scf18896_69028-71731' ' no hits & (original description: Putative , Description = , PFAM = PF13960)' T '35.2' 'not assigned.unknown' 'niben101scf18898_114847-117125' '(at1g65032 : 80.1) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf18939_27338-29827' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf18962_1-1513' ' no hits & (original description: Putative , Description = , PFAM = PF10551)' T '35.2' 'not assigned.unknown' 'niben101scf18985_243753-246784' '(at5g67020 : 164.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 328.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf19062_4071-9211' ' no hits & (original description: Putative , Description = , PFAM = PF03242)' T '35.2' 'not assigned.unknown' 'niben101scf19062_34188-42844' '(at2g14830 : 174.0) Regulator of Vps4 activity in the MVB pathway protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Zinc finger, UBP-type (InterPro:IPR001607), Histone deacetylase superfamily (InterPro:IPR000286); Has 863 Blast hits to 862 proteins in 184 species: Archae - 0; Bacteria - 6; Metazoa - 544; Fungi - 131; Plants - 94; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 348.0) & (original description: Putative BnaC09g08740D, Description = BnaC09g08740D protein, PFAM = PF02148)' T '35.2' 'not assigned.unknown' 'niben101scf19091_10926-13772' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf19135_14174-16530' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf19138_33159-37136' '(at5g05330 : 105.0) Encodes a protein with a putative HMG-box domain. The high-mobility group (HMG) proteins are chromatin-associated proteins that act as architectural factors in various nucleoprotein structures, which regulate DNA-dependent processes such as transcription and recombination. Expression of this gene was not detected according to Grasser et al. (J. Mol. Biol. 2006:358, 654-664).; HMG-box (high mobility group) DNA-binding family protein; FUNCTIONS IN: DNA binding; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 210.0) & (original description: Putative , Description = HMG-box DNA-binding family protein, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf19211_24089-28089' '(at4g00910 : 491.0) Aluminium activated malate transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to aluminum ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: sepal, root, pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G08440.1); Has 1015 Blast hits to 1014 proteins in 357 species: Archae - 0; Bacteria - 624; Metazoa - 0; Fungi - 16; Plants - 351; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|39909 : 361.0) no description available & (gnl|cdd|85194 : 183.0) no description available & (reliability: 982.0) & (original description: Putative ALMT10, Description = Aluminum-activated malate transporter 10, PFAM = PF11744)' T '35.2' 'not assigned.unknown' 'niben101scf19277_1567-10905' '(at2g31600 : 115.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative PGSC0003DMG401016399, Description = BnaA10g03890D protein, PFAM = PF13891)' T '35.2' 'not assigned.unknown' 'niben101scf19277_55943-60007' '(at5g11680 : 201.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WW-domain-binding protein (InterPro:IPR018826); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|38504 : 105.0) no description available & (reliability: 402.0) & (original description: Putative At5g11680, Description = Putative uncharacterized protein T22P22_70, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf19295_58150-60251' ' no hits & (original description: Putative psbM, Description = Photosystem II reaction center protein M, PFAM = PF05151)' T '35.2' 'not assigned.unknown' 'niben101scf19309_63703-71594' '(at3g27930 : 581.0) unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages. & (reliability: 1162.0) & (original description: Putative At3g27930, Description = AT3g27930/K24A2_2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf19446_230957-234272' '(at1g29250 : 169.0) Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein (InterPro:IPR002775), Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related (InterPro:IPR014560); BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein (TAIR:AT2G34160.1); Has 157 Blast hits to 157 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 338.0) & (original description: Putative nab, Description = Alba DNA/RNA-binding protein, PFAM = PF01918)' T '35.2' 'not assigned.unknown' 'niben101scf19584_46752-49252' '(at1g02816 : 167.0) Protein of unknown function, DUF538; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT4G02370.1); Has 559 Blast hits to 558 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 558; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (gnl|cdd|86647 : 132.0) no description available & (reliability: 334.0) & (original description: Putative At1g02813, Description = Uncharacterized protein At5g01610 family, PFAM = PF04398)' T '35.2' 'not assigned.unknown' 'niben101scf19584_71162-73866' ' (original description: Putative lea5, Description = Late embryogenis abundant protein 5, PFAM = PF03242)' T '35.2' 'not assigned.unknown' 'niben101scf19623_59284-65452' '(at3g47610 : 406.0) transcription regulators;zinc ion binding; FUNCTIONS IN: transcription regulator activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2HC5-type (InterPro:IPR009349); Has 342 Blast hits to 320 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 117; Plants - 38; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (gnl|cdd|38056 : 214.0) no description available & (gnl|cdd|69727 : 85.8) no description available & (reliability: 812.0) & (original description: Putative BnaC03g57060D, Description = BnaC03g57060D protein, PFAM = PF06221)' T '35.2' 'not assigned.unknown' 'niben101scf19733_33627-37115' ' no hits & (original description: Putative , Description = , PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'niben101scf19757_5617-9612' '(gnl|cdd|38177 : 258.0) no description available & (at2g23790 : 250.0) Protein of unknown function (DUF607); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF607 (InterPro:IPR006769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF607) (TAIR:AT4G36820.1); Has 364 Blast hits to 364 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 147; Fungi - 45; Plants - 131; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (gnl|cdd|68256 : 223.0) no description available & (reliability: 500.0) & (original description: Putative At2g23790, Description = Calcium uniporter protein 2, mitochondrial, PFAM = PF04678)' T '35.2' 'not assigned.unknown' 'niben101scf19757_116297-121089' '(at1g19330 : 288.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75060.1). & (reliability: 576.0) & (original description: Putative BnaC05g14960D, Description = BnaC05g14960D protein, PFAM = PF13867)' T '35.2' 'not assigned.unknown' 'niben101scf19766_128273-135934' '(at1g27100 : 447.0) Actin cross-linking protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF569 (InterPro:IPR007679), Actin cross-linking (InterPro:IPR008999); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF569) (TAIR:AT1G69890.1); Has 362 Blast hits to 223 proteins in 29 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 10; Plants - 341; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|68182 : 229.0) no description available & (reliability: 894.0) & (original description: Putative At1g27100, Description = Actin cross-linking protein, PFAM = PF04601;PF04601)' T '35.2' 'not assigned.unknown' 'niben101scf19800_20243-29421' '(at1g29820 : 502.0) Magnesium transporter CorA-like family protein; FUNCTIONS IN: metal ion transmembrane transporter activity; INVOLVED IN: metal ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); BEST Arabidopsis thaliana protein match is: Magnesium transporter CorA-like family protein (TAIR:AT1G29830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1004.0) & (original description: Putative At1g29830, Description = Magnesium transporter CorA-like family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf19922_15498-27096' '(at1g27290 : 144.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 288.0) & (original description: Putative BnaAnng21740D, Description = BnaAnng21740D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf19975_193728-196732' '(gnl|cdd|71235 : 169.0) no description available & (at5g22930 : 130.0) Protein of unknown function (DUF1635); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1635 (InterPro:IPR012862); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1635) (TAIR:AT3G44940.1); Has 97 Blast hits to 97 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 260.0) & (original description: Putative At5g22930, Description = Emb}, PFAM = PF07795)' T '35.2' 'not assigned.unknown' 'niben101scf20010_81103-87607' '(at1g10280 : 475.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT3G21310.1); Has 584 Blast hits to 584 proteins in 19 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 556; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|86287 : 438.0) no description available & (reliability: 950.0) & (original description: Putative At1g10280, Description = At1g10280, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben101scf20039_152670-162830' '(at4g03420 : 412.0) Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G03610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|69161 : 411.0) no description available & (reliability: 824.0) & (original description: Putative F9H3.4, Description = Putative uncharacterized protein AT4g03420, PFAM = PF05623)' T '35.2' 'not assigned.unknown' 'niben101scf20101_74556-80553' '(at2g01340 : 162.0) Encodes a protein whose expression is responsive to nematode infection.; At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, response to nematode; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 110 Blast hits to 110 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 324.0) & (original description: Putative At17.1, Description = At2g01340, PFAM = PF14009)' T '35.2' 'not assigned.unknown' 'niben101scf20209_41372-46894' '(at5g06700 : 501.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). A tbr mutant is impaired in its ability to deposit secondary wall cellulose in specific cell types, most notably in trichomes.; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: plant-type cell wall modification, pectin biosynthetic process, cellulose biosynthetic process, secondary cell wall biogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT3G12060.1); Has 18773 Blast hits to 6666 proteins in 584 species: Archae - 22; Bacteria - 3086; Metazoa - 4181; Fungi - 2776; Plants - 1414; Viruses - 506; Other Eukaryotes - 6788 (source: NCBI BLink). & (gnl|cdd|72785 : 182.0) no description available & (reliability: 1002.0) & (original description: Putative TBL2, Description = Protein trichome birefringence-like 2, PFAM = PF13839;PF14416)' T '35.2' 'not assigned.unknown' 'niben101scf20506_169366-173479' ' no hits & (original description: Putative , Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf20512_31624-39188' '(at1g53250 : 145.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53800.1); Has 11909 Blast hits to 7704 proteins in 757 species: Archae - 51; Bacteria - 1338; Metazoa - 4550; Fungi - 987; Plants - 464; Viruses - 24; Other Eukaryotes - 4495 (source: NCBI BLink). & (reliability: 290.0) & (original description: Putative PGSC0003DMG400015334, Description = BnaA06g01030D protein, PFAM = PF07460)' T '35.2' 'not assigned.unknown' 'niben101scf20512_81304-83831' ' (original description: Putative PMEI, Description = Pectinesterase inhibitor, PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'niben101scf20521_89895-96888' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf20576_87211-91937' ' no hits & (original description: Putative PTS, Description = PETROSELINUM, PFAM = PF03791;PF03790)' T '35.2' 'not assigned.unknown' 'niben101scf20669_20291-50550' '(at5g58100 : 1353.0) unknown protein; INVOLVED IN: pollen exine formation; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 2706.0) & (original description: Putative BnaC09g33620D, Description = BnaC09g33620D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf20768_109536-111461' '(gnl|cdd|38431 : 98.1) no description available & (at1g21360 : 89.4) glycolipid transfer protein 2 (GLTP2); FUNCTIONS IN: glycolipid transporter activity, glycolipid binding; INVOLVED IN: glycolipid transport; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: Glycolipid transfer protein (GLTP) family protein (TAIR:AT3G21260.3); Has 509 Blast hits to 509 proteins in 154 species: Archae - 0; Bacteria - 0; Metazoa - 240; Fungi - 112; Plants - 114; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative GLTP3, Description = Glycolipid transfer protein (GLTP) family protein, PFAM = PF08718)' T '35.2' 'not assigned.unknown' 'niben101scf20773_76241-81712' '(at1g21930 : 138.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G42150.3); Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative BnaC05g17300D, Description = BnaC05g17300D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf20787_88568-93036' ' no hits & (original description: Putative PGSC0003DMG400005597, Description = Damaged dna-binding 2, putative isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf20904_124518-130136' '(at5g11730 : 492.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G25970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|86287 : 442.0) no description available & (reliability: 984.0) & (original description: Putative At3g21310, Description = AT3G21310.1, PFAM = PF02485)' T '35.2' 'not assigned.unknown' 'niben101scf20914_94654-98242' ' no hits & (original description: Putative , Description = , PFAM = PF00403)' T '35.2' 'not assigned.unknown' 'niben101scf20932_54396-67872' ' (original description: Putative atr, Description = Aminotransferase, PFAM = PF00266)' T '35.2' 'not assigned.unknown' 'niben101scf20949_8200-10983' ' no hits & (original description: Putative Tgt1ORF2, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf20953_13796-17134' '(at2g46100 : 281.0) Nuclear transport factor 2 (NTF2) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); BEST Arabidopsis thaliana protein match is: Uncharacterized conserved protein (DUF2358) (TAIR:AT3G04890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 562.0) & (original description: Putative BnaC04g04760D, Description = BnaC04g04760D protein, PFAM = PF10184)' T '35.2' 'not assigned.unknown' 'niben101scf21026_14060-22647' '(at2g32240 : 427.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05320.3); Has 470429 Blast hits to 168274 proteins in 4282 species: Archae - 6896; Bacteria - 131956; Metazoa - 175525; Fungi - 33166; Plants - 25441; Viruses - 2243; Other Eukaryotes - 95202 (source: NCBI BLink). & (gnl|cdd|35383 : 123.0) no description available & (gnl|cdd|31389 : 90.9) no description available & (reliability: 854.0) & (original description: Putative POPTR_0006s02200g, Description = Myosin-related family protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf21123_64908-69795' '(at5g41380 : 151.0) CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT1G63820.1); Has 1690 Blast hits to 1687 proteins in 111 species: Archae - 0; Bacteria - 2; Metazoa - 13; Fungi - 3; Plants - 1603; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 302.0) & (original description: Putative At1g63820, Description = CCT motif family protein, PFAM = PF06203)' T '35.2' 'not assigned.unknown' 'niben101scf21257_39302-42544' '(at1g47740 : 309.0) PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT5G25170.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35545 : 214.0) no description available & (gnl|cdd|69428 : 163.0) no description available & (reliability: 618.0) & (original description: Putative dl4780c, Description = At5g25170, PFAM = PF05903)' T '35.2' 'not assigned.unknown' 'niben101scf21257_55038-58770' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf21301_43187-46849' '(at4g34215 : 306.0) Encodes a member of the SGNH-hydrolase superfamily of enzymes. The enzymes of the SGNH-hydrolase superfamily facilitate the hydrolysis of ester, thioester and amide bonds in a range of substrates including complex polysaccharides, lysophospholipids, acyl-CoA esters and other compounds.; Domain of unknown function (DUF303) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF303, acetylesterase putative (InterPro:IPR005181); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF303) (TAIR:AT3G53010.1); Has 345 Blast hits to 345 proteins in 104 species: Archae - 2; Bacteria - 231; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|86388 : 85.0) no description available & (reliability: 612.0) & (original description: Putative At4g34215, Description = Probable carbohydrate esterase At4g34215, PFAM = PF03629)' T '35.2' 'not assigned.unknown' 'niben101scf21372_12767-24123' '(at2g20740 : 271.0) Tetraspanin family protein; BEST Arabidopsis thaliana protein match is: Tetraspanin family protein (TAIR:AT2G20230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 542.0) & (original description: Putative TOM2AH3, Description = Tetraspanin-19, PFAM = PF00335)' T '35.2' 'not assigned.unknown' 'niben101scf21383_95095-97427' ' no hits & (original description: Putative , Description = , PFAM = PF13963)' T '35.2' 'not assigned.unknown' 'niben101scf21408_39873-43060' '(at1g57680 : 294.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031277 (InterPro:IPR016971); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 588.0) & (original description: Putative BnaC04g18260D, Description = BnaC04g18260D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf21459_18119-27438' '(at4g02405 : 285.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Leucine carboxyl methyltransferase (InterPro:IPR007213); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 570.0) & (original description: Putative At4g02405, Description = S-adenosyl-L-methionine-dependent methyltransferases superfamily protein, PFAM = PF04072)' T '35.2' 'not assigned.unknown' 'niben101scf21484_175202-187883' ' no hits & (original description: Putative BnaA06g38970D, Description = BnaA06g38970D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf21530_1354-11393' '(at3g29180 : 506.0) Protein of unknown function (DUF1336); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT5G39430.1). & (gnl|cdd|70520 : 280.0) no description available & (reliability: 1012.0) & (original description: Putative At3g29180, Description = AT3G29180 protein, PFAM = PF07059)' T '35.2' 'not assigned.unknown' 'niben101scf21557_161192-164061' '(at4g24910 : 192.0) Protein of unknown function (DUF579); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF579 (InterPro:IPR021148), Conserved hypothetical protein CHP01627 (InterPro:IPR006514); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF579) (TAIR:AT5G67210.1); Has 253 Blast hits to 252 proteins in 21 species: Archae - 0; Bacteria - 5; Metazoa - 1; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|68247 : 184.0) no description available & (reliability: 384.0) & (original description: Putative PGSC0003DMG400015302, Description = Putative polysaccharide biosynthesis protein, PFAM = PF04669)' T '35.2' 'not assigned.unknown' 'niben101scf21684_13045-28252' '(at2g38580 : 115.0) Mitochondrial ATP synthase D chain-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 74576 Blast hits to 44417 proteins in 2485 species: Archae - 658; Bacteria - 11770; Metazoa - 34102; Fungi - 5844; Plants - 3204; Viruses - 216; Other Eukaryotes - 18782 (source: NCBI BLink). & (reliability: 230.0) & (original description: Putative PGSC0003DMG400004043, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf21770_36616-51635' '(at4g03090 : 541.0) sequence-specific DNA binding;sequence-specific DNA binding transcription factors; FUNCTIONS IN: sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356). & (reliability: 1082.0) & (original description: Putative ndx1, Description = NDX1 homeobox protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf21788_43040-46194' '(at1g79060 : 148.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56020.1); Has 3399 Blast hits to 980 proteins in 195 species: Archae - 0; Bacteria - 839; Metazoa - 390; Fungi - 256; Plants - 154; Viruses - 9; Other Eukaryotes - 1751 (source: NCBI BLink). & (reliability: 296.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf21935_5913-54052' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf21986_100108-102878' '(gnl|cdd|68336 : 236.0) no description available & (at3g25640 : 234.0) Protein of unknown function, DUF617; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF617, plant (InterPro:IPR006460); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF617 (TAIR:AT5G23100.1); Has 258 Blast hits to 256 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 258; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 468.0) & (original description: Putative MIZ1, Description = BnaA06g33470D protein, PFAM = PF04759)' T '35.2' 'not assigned.unknown' 'niben101scf22015_272736-285466' '(at4g01290 : 238.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 1797 Blast hits to 1352 proteins in 216 species: Archae - 0; Bacteria - 202; Metazoa - 850; Fungi - 267; Plants - 109; Viruses - 0; Other Eukaryotes - 369 (source: NCBI BLink). & (reliability: 476.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf22015_302981-307599' '(at5g64130 : 126.0) cAMP-regulated phosphoprotein 19-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: cAMP-regulated phosphoprotein/endosulphine conserved region (InterPro:IPR006760); BEST Arabidopsis thaliana protein match is: cAMP-regulated phosphoprotein 19-related protein (TAIR:AT1G69510.2); Has 149 Blast hits to 149 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|71283 : 98.7) no description available & (reliability: 252.0) & (original description: Putative At5g64130, Description = cAMP-regulated phosphoprotein-like protein, PFAM = PF04667)' T '35.2' 'not assigned.unknown' 'niben101scf22015_320608-327374' '(at1g01500 : 360.0) Erythronate-4-phosphate dehydrogenase family protein; BEST Arabidopsis thaliana protein match is: Erythronate-4-phosphate dehydrogenase family protein (TAIR:AT1G19400.2); Has 143 Blast hits to 143 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 720.0) & (original description: Putative At1g01500, Description = Uncharacterized protein At1g01500, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf22058_83474-87643' ' no hits & (original description: Putative At5g39570, Description = Uncharacterized protein At5g39570, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf22062_18983-21361' ' no hits & (original description: Putative , Description = Integrase core domain containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf22062_21781-46038' ' (original description: Putative Sb01g019530, Description = Putative uncharacterized protein Sb01g019530, PFAM = PF12894;PF00400;PF00400)' T '35.2' 'not assigned.unknown' 'niben101scf22062_22638-25259' ' no hits & (original description: Putative , Description = Putative WD repeat-containing protein 91-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf22103_7081-9461' ' (original description: Putative PGSC0003DMG400041390, Description = , PFAM = PF05938)' T '35.2' 'not assigned.unknown' 'niben101scf22171_12097-18207' '(at4g15545 : 240.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 480.0) & (original description: Putative At4g15545, Description = Uncharacterized protein At4g15545, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf22195_133364-135706' ' (original description: Putative cps, Description = Copalyl diphosphate synthase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf22230_6631-9068' ' no hits & (original description: Putative PGSC0003DMG400001706, Description = Putative RING-H2 finger protein ATL73-like, PFAM = PF13639)' T '35.2' 'not assigned.unknown' 'niben101scf22285_1-7324' '(at5g02520 : 97.4) CONTAINS InterPro DOMAIN/s: SANT associated (InterPro:IPR015216); BEST Arabidopsis thaliana protein match is: kinase interacting family protein (TAIR:AT1G58210.1); Has 842 Blast hits to 736 proteins in 154 species: Archae - 2; Bacteria - 99; Metazoa - 236; Fungi - 52; Plants - 90; Viruses - 0; Other Eukaryotes - 363 (source: NCBI BLink). & (gnl|cdd|72550 : 91.1) no description available & (reliability: 194.8) & (original description: Putative , Description = , PFAM = PF09133)' T '35.2' 'not assigned.unknown' 'niben101scf22376_75729-78298' ' (original description: Putative FIL1, Description = Stamen-specific protein FIL1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf22566_68390-75223' '(at4g27500 : 330.0) interacts with H+-ATPase, and regulates its activity; proton pump interactor 1 (PPI1); FUNCTIONS IN: protein binding; INVOLVED IN: regulation of proton transport; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36690.1); Has 56187 Blast hits to 35171 proteins in 2461 species: Archae - 533; Bacteria - 11472; Metazoa - 20772; Fungi - 6196; Plants - 2564; Viruses - 257; Other Eukaryotes - 14393 (source: NCBI BLink). & (reliability: 660.0) & (original description: Putative PPI1, Description = Proton pump-interactor 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf22688_56787-59706' ' no hits & (original description: Putative , Description = , PFAM = PF02362)' T '35.2' 'not assigned.unknown' 'niben101scf22698_1-15388' '(at2g38570 : 248.0) CONTAINS InterPro DOMAIN/s: PRC-barrel-like (InterPro:IPR011033); Has 300 Blast hits to 300 proteins in 81 species: Archae - 0; Bacteria - 135; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (reliability: 496.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf22707_27538-30266' ' no hits & (original description: Putative TED7A, Description = Hydroxyproline-rich glycoprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf22811_36118-43866' '(at2g26470 : 236.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF159 (InterPro:IPR003738); Has 3646 Blast hits to 3636 proteins in 1001 species: Archae - 41; Bacteria - 1922; Metazoa - 142; Fungi - 125; Plants - 44; Viruses - 14; Other Eukaryotes - 1358 (source: NCBI BLink). & (gnl|cdd|37829 : 202.0) no description available & (gnl|cdd|86038 : 156.0) no description available & (reliability: 472.0) & (original description: Putative , Description = , PFAM = PF02586)' T '35.2' 'not assigned.unknown' 'niben101scf22811_74755-77030' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf22811_174022-182611' '(at5g06440 : 371.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT3G11720.3). & (reliability: 742.0) & (original description: Putative At3g11720, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf22894_7308-13767' '(at4g29750 : 638.0) CRS1 / YhbY (CRM) domain-containing protein; FUNCTIONS IN: RNA binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: CRM family member 3A (TAIR:AT3G23070.1); Has 408 Blast hits to 338 proteins in 45 species: Archae - 2; Bacteria - 2; Metazoa - 32; Fungi - 6; Plants - 353; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|37201 : 376.0) no description available & (gnl|cdd|85815 : 90.6) no description available & (reliability: 1276.0) & (original description: Putative BnaC07g42090D, Description = BnaC07g42090D protein, PFAM = PF01985;PF01985;PF01985)' T '35.2' 'not assigned.unknown' 'niben101scf22905_14929-17282' ' no hits & (original description: Putative BnaA09g36790D, Description = BnaA09g36790D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf22924_28442-35650' '(at2g06010 : 301.0) encodes a novel protein whose expression level is induced in lines overexpressing salicylic-acid (SA)-inducible Arabidopsis DNA binding with one finger (Dof) transcription factor, called OBF-binding protein 3.; OBP3-responsive gene 4 (ORG4); Has 29 Blast hits to 29 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 602.0) & (original description: Putative ORG4, Description = OBP3-responsive protein 4, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf22924_36508-39070' '(at3g42725 : 160.0) Putative membrane lipoprotein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 18 Blast hits to 18 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 320.0) & (original description: Putative At3g42725, Description = Putative membrane lipoprotein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf23040_39466-42245' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf23111_7541-9950' ' no hits & (original description: Putative , Description = , PFAM = PF02977)' T '35.2' 'not assigned.unknown' 'niben101scf23113_46370-55160' '(at5g05230 : 259.0) RING/U-box superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G40640.1); Has 107 Blast hits to 107 proteins in 24 species: Archae - 0; Bacteria - 4; Metazoa - 14; Fungi - 6; Plants - 79; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 518.0) & (original description: Putative BnaC05g35490D, Description = BnaC05g35490D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf23152_137721-141200' ' no hits & (original description: Putative glysoja_043080, Description = Putative membrane-associated kinase regulator 6, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf23248_82467-89965' '(at1g76620 : 333.0) Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT1G21060.1); Has 866 Blast hits to 747 proteins in 129 species: Archae - 0; Bacteria - 108; Metazoa - 79; Fungi - 87; Plants - 458; Viruses - 1; Other Eukaryotes - 133 (source: NCBI BLink). & (gnl|cdd|68359 : 177.0) no description available & (reliability: 666.0) & (original description: Putative At1g21060, Description = BnaA04g13840D protein, PFAM = PF04784;PF14389)' T '35.2' 'not assigned.unknown' 'niben101scf23811_523-2538' '(at2g27830 : 87.4) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits to 131 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 174.8) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf23814_125738-128265' ' no hits & (original description: Putative PGSC0003DMG400009677, Description = , PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'niben101scf23825_48528-55229' '(at3g18440 : 552.0) Belongs to the aluminum-activated malate transporter family. Encodes a vacuolar malate channel. Expressed in all parts of plants. Almost exclusively expressed in mesophyll cells of leaves.; aluminum-activated malate transporter 9 (ALMT9); CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G18420.1); Has 814 Blast hits to 808 proteins in 259 species: Archae - 0; Bacteria - 440; Metazoa - 0; Fungi - 20; Plants - 338; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (gnl|cdd|39909 : 454.0) no description available & (gnl|cdd|85194 : 156.0) no description available & (reliability: 1104.0) & (original description: Putative ALMT9, Description = Aluminum-activated malate transporter 9, PFAM = PF11744)' T '35.2' 'not assigned.unknown' 'niben101scf23843_73287-77109' ' no hits & (original description: Putative Sb03g036890, Description = Putative uncharacterized protein Sb03g036890, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf23876_25253-28107' '(at1g31460 : 95.1) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23270.1); Has 1251 Blast hits to 756 proteins in 185 species: Archae - 0; Bacteria - 295; Metazoa - 374; Fungi - 176; Plants - 58; Viruses - 17; Other Eukaryotes - 331 (source: NCBI BLink). & (reliability: 190.2) & (original description: Putative PGSC0003DMG400041236, Description = At1g31460, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf23954_7593-9889' ' no hits & (original description: Putative OST4A, Description = Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A, PFAM = PF10215)' T '35.2' 'not assigned.unknown' 'niben101scf24018_5052-8279' '(gnl|cdd|71349 : 117.0) no description available & (at2g25780 : 112.0) Protein of unknown function (DUF1677); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1677, plant (InterPro:IPR012876); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1677) (TAIR:AT1G79770.1); Has 244 Blast hits to 244 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 244; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 224.0) & (original description: Putative glysoja_025047, Description = , PFAM = PF07911)' T '35.2' 'not assigned.unknown' 'niben101scf24155_40003-44805' '(at3g26580 : 318.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 1465 Blast hits to 1065 proteins in 209 species: Archae - 4; Bacteria - 118; Metazoa - 541; Fungi - 193; Plants - 127; Viruses - 57; Other Eukaryotes - 425 (source: NCBI BLink). & (reliability: 636.0) & (original description: Putative orf03, Description = Orf03 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf24238_62948-66732' ' no hits & (original description: Putative PGSC0003DMG400016167, Description = ROP-interactive CRIB motif protein, PFAM = PF00786)' T '35.2' 'not assigned.unknown' 'niben101scf24249_24921-26886' ' no hits & (original description: Putative , Description = , PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'niben101scf24322_686-3342' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf24322_9513-12632' ' no hits & (original description: Putative s31, Description = 30S ribosomal protein S31, chloroplastic, PFAM = PF17067)' T '35.2' 'not assigned.unknown' 'niben101scf24322_30940-40094' '(at2g40070 : 213.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1); Has 108635 Blast hits to 60786 proteins in 2176 species: Archae - 287; Bacteria - 15142; Metazoa - 39415; Fungi - 26849; Plants - 4416; Viruses - 2864; Other Eukaryotes - 19662 (source: NCBI BLink). & (reliability: 426.0) & (original description: Putative At2g40070, Description = At2g40070, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf24330_25403-28239' '(at1g64980 : 406.0) Nucleotide-diphospho-sugar transferases superfamily protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 703 Blast hits to 703 proteins in 58 species: Archae - 0; Bacteria - 90; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 4; Other Eukaryotes - 564 (source: NCBI BLink). & (reliability: 812.0) & (original description: Putative CDI, Description = Glycosyltransferase, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf24482_40892-43891' ' no hits & (original description: Putative BnaC03g48770D, Description = BnaC03g48770D protein, PFAM = PF06404)' T '35.2' 'not assigned.unknown' 'niben101scf24486_79975-83163' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf24567_81265-84011' '(at2g26110 : 80.5) Protein of unknown function (DUF761); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G56980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 161.0) & (original description: Putative PGSC0003DMG400017835, Description = , PFAM = PF14364;PF05553)' T '35.2' 'not assigned.unknown' 'niben101scf24758_71084-75923' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf24848_70192-73367' '(gnl|cdd|69171 : 385.0) no description available & (at1g18740 : 308.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT1G74450.1); Has 167 Blast hits to 164 proteins in 20 species: Archae - 3; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 616.0) & (original description: Putative UP1, Description = BYPASS-related protein, PFAM = PF05633)' T '35.2' 'not assigned.unknown' 'niben101scf24889_35122-37477' ' no hits & (original description: Putative EMH5, Description = Em protein H5, PFAM = PF00477)' T '35.2' 'not assigned.unknown' 'niben101scf25021_123083-127593' '(at2g26570 : 441.0) Encodes a coiled-coil protein WEB1 (weak chloroplast movement under blue light 1). WEB1, together with another coiled-coil protein WEB2/PMI2 (At1g66840), maintains the chloroplast photorelocation movement velocity.; Plant protein of unknown function (DUF827); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT4G33390.1); Has 151476 Blast hits to 77886 proteins in 3477 species: Archae - 2093; Bacteria - 37732; Metazoa - 61062; Fungi - 12741; Plants - 9509; Viruses - 541; Other Eukaryotes - 27798 (source: NCBI BLink). & (gnl|cdd|72811 : 121.0) no description available & (reliability: 882.0) & (original description: Putative WEB1, Description = Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1, PFAM = PF05701)' T '35.2' 'not assigned.unknown' 'niben101scf25021_193543-195806' ' no hits & (original description: Putative PGSC0003DMG400023125, Description = Calcium-binding EF-hand family protein, putative, PFAM = PF00036;PF00036)' T '35.2' 'not assigned.unknown' 'niben101scf25352_30605-33813' ' no hits & (original description: Putative PGSC0003DMG400030693, Description = Os04g0643800 protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf25394_141397-146674' '(at5g47830 : 165.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 330.0) & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf25583_48736-53365' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf25598_26874-29959' '(at3g24740 : 323.0) Protein of unknown function (DUF1644); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1644) (TAIR:AT1G68140.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|71240 : 115.0) no description available & (reliability: 646.0) & (original description: Putative , Description = , PFAM = PF07800)' T '35.2' 'not assigned.unknown' 'niben101scf25598_91055-93632' ' no hits & (original description: Putative GEG4, Description = Gibberellin-regulated protein 5, PFAM = PF02704)' T '35.2' 'not assigned.unknown' 'niben101scf25634_29279-36555' '(at2g15860 : 197.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 110 Blast hits to 109 proteins in 51 species: Archae - 0; Bacteria - 4; Metazoa - 37; Fungi - 10; Plants - 37; Viruses - 3; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 394.0) & (original description: Putative At2g15860, Description = Putative uncharacterized protein Sb01g008720, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf25674_12249-22814' '(at1g74640 : 462.0) alpha/beta-Hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 202 Blast hits to 202 proteins in 71 species: Archae - 28; Bacteria - 92; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 924.0) & (original description: Putative At1g74640, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF12697)' T '35.2' 'not assigned.unknown' 'niben101scf25930_7734-10342' ' no hits & (original description: Putative PGSC0003DMG400002071, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf26117_18372-22207' '(at5g02020 : 94.4) Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).; unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G59080.1); Has 52 Blast hits to 52 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 188.8) & (original description: Putative T7H20_70, Description = AT5g02020/T7H20_70, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf26250_15894-38754' '(at4g14970 : 1157.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; Has 257 Blast hits to 164 proteins in 70 species: Archae - 0; Bacteria - 4; Metazoa - 189; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (gnl|cdd|39910 : 451.0) no description available & (reliability: 2314.0) & (original description: Putative Os07g0154400, Description = Os07g0154400 protein, PFAM = PF14631;PF14631)' T '35.2' 'not assigned.unknown' 'niben101scf26315_29385-33125' ' no hits & (original description: Putative PGSC0003DMG400008053, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf26477_19071-21751' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf26737_17278-20535' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf26800_824-21312' '(at3g05760 : 223.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, double-stranded RNA binding (InterPro:IPR022755). & (gnl|cdd|39925 : 172.0) no description available & (reliability: 446.0) & (original description: Putative ZMAT2, Description = Zinc finger matrin-type protein 2, PFAM = PF12874)' T '35.2' 'not assigned.unknown' 'niben101scf26981_9477-16514' '(at3g29180 : 438.0) Protein of unknown function (DUF1336); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT5G39430.1). & (gnl|cdd|70520 : 283.0) no description available & (reliability: 876.0) & (original description: Putative CW14, Description = AT3G29180 protein, PFAM = PF07059)' T '35.2' 'not assigned.unknown' 'niben101scf27159_96042-98761' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf27265_36999-44683' '(at3g01680 : 499.0) CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 998.0) & (original description: Putative SEOB, Description = Protein SIEVE ELEMENT OCCLUSION B, PFAM = PF14577;PF14576)' T '35.2' 'not assigned.unknown' 'niben101scf27305_43121-49557' '(at5g46220 : 530.0) Protein of unknown function (DUF616); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF616 (InterPro:IPR006852); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF616) (TAIR:AT4G38500.1); Has 226 Blast hits to 226 proteins in 19 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (gnl|cdd|68342 : 379.0) no description available & (reliability: 1060.0) & (original description: Putative At5g46220, Description = At5g46220, PFAM = PF04765)' T '35.2' 'not assigned.unknown' 'niben101scf27377_58776-61859' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf27527_73661-93354' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf27671_47211-55721' '(at2g40980 : 744.0) Protein kinase superfamily protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase-like domain (InterPro:IPR011009); Has 288 Blast hits to 258 proteins in 97 species: Archae - 0; Bacteria - 150; Metazoa - 0; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (reliability: 1488.0) & (original description: Putative TCM_024156, Description = Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase isoform 1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf27717_18694-21095' ' (original description: Putative corC, Description = Lipid transfer protein, PFAM = PF14547)' T '35.2' 'not assigned.unknown' 'niben101scf27799_1-668' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf27837_13044-19432' '(at5g51150 : 531.0) Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrial inner membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34630.1); Has 522 Blast hits to 429 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 235; Fungi - 150; Plants - 73; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (gnl|cdd|36612 : 313.0) no description available & (reliability: 1062.0) & (original description: Putative ST16, Description = BnaA03g13240D protein, PFAM = PF15982)' T '35.2' 'not assigned.unknown' 'niben101scf27854_1-14972' '(at5g24690 : 602.0) INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: reticulata-related 1 (TAIR:AT5G22790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1204.0) & (original description: Putative At5g24690, Description = AT5g24690/MXC17_8, PFAM = PF11891)' T '35.2' 'not assigned.unknown' 'niben101scf27945_25474-28426' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf28009_23197-26094' ' no hits & (original description: Putative LOC100286033, Description = DNA binding protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf28036_1-2912' ' no hits & (original description: Putative TIFY5A, Description = Protein TIFY 5A, PFAM = PF09425;PF06200)' T '35.2' 'not assigned.unknown' 'niben101scf28181_19667-26631' '(at2g44270 : 617.0) Encodes ROL5, a repressor of lrx1 mutants that develop aberrant root hairs. ROL5 is a homolog of yeast Ncs6p that affects TOR signaling. The target of rapamycin (TOR) pathway is a major regulator of cell growth in eukaryotes, and inhibition of this pathway by rapamycin reduces cell growth. ROL5 might function as a mitochondrial component of the TOR pathway that influences the plant's response to ROS (reactive oxygen species).; repressor of lrx1 (ROL5); FUNCTIONS IN: ATP binding; INVOLVED IN: response to reactive oxygen species, regulation of plant-type cell wall organization or biogenesis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), PP-loop (InterPro:IPR011063), 2-thiocytidine tRNA biosynthesis protein, TtcA (InterPro:IPR012089); BEST Arabidopsis thaliana protein match is: 2-thiocytidine tRNA biosynthesis protein, TtcA (TAIR:AT1G76170.1). & (gnl|cdd|38051 : 444.0) no description available & (gnl|cdd|30180 : 234.0) no description available & (reliability: 1234.0) & (original description: Putative NCS6, Description = Cytoplasmic tRNA 2-thiolation protein 1, PFAM = PF16503;PF01171)' T '35.2' 'not assigned.unknown' 'niben101scf28181_55102-58892' ' (original description: Putative ppo, Description = Polyphenol oxidase, PFAM = PF12142;PF00264;PF12143)' T '35.2' 'not assigned.unknown' 'niben101scf28230_20508-27166' '(at3g23740 : 117.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14120.1); Has 155 Blast hits to 130 proteins in 48 species: Archae - 0; Bacteria - 16; Metazoa - 19; Fungi - 48; Plants - 47; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 234.0) & (original description: Putative , Description = Uncharacterized protein isoform 2, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf28250_42828-45539' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf28250_46770-52546' '(at1g47420 : 245.0) succinate dehydrogenase 5 (SDH5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 2 (TAIR:AT1G47260.1); Has 145 Blast hits to 145 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 490.0) & (original description: Putative SDH5, Description = Succinate dehydrogenase subunit 5, mitochondrial, PFAM = PF14290)' T '35.2' 'not assigned.unknown' 'niben101scf28259_533-3418' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf28503_66197-72870' ' (original description: Putative ycf23, Description = IMP dehydrogenase/GMP reductase, PFAM = PF04481)' T '35.2' 'not assigned.unknown' 'niben101scf28615_1-1389' ' (original description: Putative pol, Description = Retrotransposon protein, putative, Ty3-gypsy subclass, PFAM = PF00078)' T '35.2' 'not assigned.unknown' 'niben101scf28620_5535-20490' '(at1g26110 : 134.0) Encodes Decapping 5, required for mRNA decapping, P-body formation and translational repression during postembryonic development.; decapping 5 (DCP5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: negative regulation of translation, deadenylation-independent decapping of nuclear-transcribed mRNA, cytoplasmic mRNA processing body assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DFDF motif (InterPro:IPR019050), FFD/TFG box motif (InterPro:IPR019053); BEST Arabidopsis thaliana protein match is: decapping 5-like (TAIR:AT5G45330.1); Has 14874 Blast hits to 10327 proteins in 603 species: Archae - 12; Bacteria - 902; Metazoa - 6418; Fungi - 2978; Plants - 1226; Viruses - 261; Other Eukaryotes - 3077 (source: NCBI BLink). & (gnl|cdd|36290 : 119.0) no description available & (gnl|cdd|29723 : 119.0) no description available & (reliability: 268.0) & (original description: Putative sum2, Description = Like-Sm ribonucleoprotein (LSM)-related domain protein, PFAM = PF09532;PF12701)' T '35.2' 'not assigned.unknown' 'niben101scf28836_1-13586' '(at2g47390 : 1368.0) Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106); BEST Arabidopsis thaliana protein match is: acylaminoacyl-peptidase-related (TAIR:AT4G14570.1); Has 4880 Blast hits to 4877 proteins in 846 species: Archae - 179; Bacteria - 3027; Metazoa - 477; Fungi - 49; Plants - 145; Viruses - 0; Other Eukaryotes - 1003 (source: NCBI BLink). & (gnl|cdd|37311 : 292.0) no description available & (gnl|cdd|31695 : 158.0) no description available & (reliability: 2736.0) & (original description: Putative GEP, Description = Probable glutamyl endopeptidase, chloroplastic, PFAM = PF00326)' T '35.2' 'not assigned.unknown' 'niben101scf29047_56883-59236' ' no hits & (original description: Putative PGSC0003DMG400006509, Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf29144_19608-25263' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf29155_43208-51642' ' no hits & (original description: Putative PGSC0003DMG400026019, Description = Zinc finger, U1-type, PFAM = PF12874;PF12874)' T '35.2' 'not assigned.unknown' 'niben101scf29357_7515-10076' ' no hits & (original description: Putative PGSC0003DMG400001558, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf29530_11731-14186' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf29588_10862-20678' '(at2g06040 : 506.0) CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT5G21900.1); Has 5028 Blast hits to 2547 proteins in 240 species: Archae - 0; Bacteria - 125; Metazoa - 2326; Fungi - 765; Plants - 1373; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink). & (gnl|cdd|37158 : 96.7) no description available & (reliability: 1012.0) & (original description: Putative TCM_037542, Description = DNA repair protein rhp7, putative, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf29632_20749-27270' '(at5g48790 : 451.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1995 (InterPro:IPR018962); BEST Arabidopsis thaliana protein match is: Low PSII Accumulation 3 (TAIR:AT1G73060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 902.0) & (original description: Putative At5g48790, Description = AT5g48790/K24G6_12, PFAM = PF09353)' T '35.2' 'not assigned.unknown' 'niben101scf29810_50057-52386' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf29888_59056-73635' '(at5g20090 : 141.0) Uncharacterised protein family (UPF0041); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0041 (InterPro:IPR005336); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0041) (TAIR:AT4G14695.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36803 : 121.0) no description available & (gnl|cdd|67278 : 103.0) no description available & (reliability: 282.0) & (original description: Putative mpc1, Description = Brain protein 44-like protein, PFAM = PF03650)' T '35.2' 'not assigned.unknown' 'niben101scf30001_567-1899' ' no hits & (original description: Putative glysoja_042996, Description = Transposon Ty3-I Gag-Pol polyprotein, PFAM = PF13650)' T '35.2' 'not assigned.unknown' 'niben101scf30081_2009-5747' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf30112_4542-6936' '(at4g16450 : 158.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photorespiration; LOCATED IN: mitochondrion, mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages. & (reliability: 316.0) & (original description: Putative 207, Description = Putative uncharacterized protein 207, PFAM = PF10785)' T '35.2' 'not assigned.unknown' 'niben101scf30112_13616-16287' '(at5g55570 : 122.0) unknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 244.0) & (original description: Putative PGSC0003DMG400029800, Description = BnaC09g53260D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf30136_6059-14893' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf30199_34196-40600' '(at5g11270 : 170.0) Encodes a homeodomain transcription factor involved in mediating resistance to infection by necrotrophic pathogens dependent on perception of jasmonic acid through COI1. Expressed in the nucleus. Downregulated upon fungal infection. Also involved in drought tolerance.; overexpressor of cationic peroxidase 3 (OCP3); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); Has 8011 Blast hits to 5672 proteins in 519 species: Archae - 20; Bacteria - 1678; Metazoa - 1663; Fungi - 1459; Plants - 650; Viruses - 160; Other Eukaryotes - 2381 (source: NCBI BLink). & (reliability: 340.0) & (original description: Putative OCP3, Description = Protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3, PFAM = PF00046)' T '35.2' 'not assigned.unknown' 'niben101scf30335_51460-54766' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf30418_25512-29506' '(at2g39435 : 115.0) Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53540.1). & (reliability: 230.0) & (original description: Putative , Description = Phosphatidylinositol n-acetylglucosaminyltransferase subunit p, putative, PFAM = PF14309)' T '35.2' 'not assigned.unknown' 'niben101scf30418_88510-91728' ' no hits & (original description: Putative F383_27307, Description = Argininosuccinate lyase, PFAM = PF09713)' T '35.2' 'not assigned.unknown' 'niben101scf30554_8909-11654' '(at2g07599 : 273.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:ATMG01040.1). & (reliability: 546.0) & (original description: Putative , Description = Putative ovule protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf30670_79382-83028' ' no hits & (original description: Putative At2g42760, Description = At2g42760, PFAM = PF07939)' T '35.2' 'not assigned.unknown' 'niben101scf30946_85440-88189' '(at2g27260 : 124.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G52460.1); Has 868 Blast hits to 868 proteins in 31 species: Archae - 2; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 862; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|70773 : 111.0) no description available & (reliability: 248.0) & (original description: Putative PGSC0003DMG400019632, Description = Late embryogenesis abundant protein, LEA-14, PFAM = PF03168)' T '35.2' 'not assigned.unknown' 'niben101scf31162_19760-34040' '(at4g20350 : 293.0) oxidoreductases; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123). & (gnl|cdd|38410 : 251.0) no description available & (reliability: 586.0) & (original description: Putative At4g20350, Description = Oxidoreductase, PFAM = PF13532)' T '35.2' 'not assigned.unknown' 'niben101scf31339_42683-44895' ' no hits & (original description: Putative PGSC0003DMG400022153, Description = BnaA05g26070D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf31472_18577-21253' '(at3g05570 : 85.5) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G39235.1); Has 73 Blast hits to 73 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 171.0) & (original description: Putative At2g21640, Description = Putative uncharacterized protein At2g21640, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf31667_7801-10317' ' no hits & (original description: Putative PGSC0003DMG400010777, Description = , PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf32157_121571-131829' '(at4g27810 : 80.1) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G53030.1); Has 73 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 160.2) & (original description: Putative , Description = Putative ovule protein, PFAM = PF05097)' T '35.2' 'not assigned.unknown' 'niben101scf32247_6724-13539' '(at5g20270 : 346.0) heptahelical transmembrane protein homologous to human adiponectin receptors and progestin receptors; heptahelical transmembrane protein1 (HHP1); FUNCTIONS IN: receptor activity; INVOLVED IN: response to salt stress, response to hormone stimulus, response to sucrose stimulus; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hly-III related (InterPro:IPR004254); BEST Arabidopsis thaliana protein match is: heptahelical transmembrane protein2 (TAIR:AT4G30850.2); Has 2727 Blast hits to 2656 proteins in 794 species: Archae - 0; Bacteria - 1143; Metazoa - 823; Fungi - 356; Plants - 236; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (gnl|cdd|35967 : 246.0) no description available & (gnl|cdd|86213 : 140.0) no description available & (reliability: 692.0) & (original description: Putative HHP1, Description = Heptahelical transmembrane protein 1, PFAM = PF03006)' T '35.2' 'not assigned.unknown' 'niben101scf32358_1072-3536' ' no hits & (original description: Putative , Description = , PFAM = PF03732)' T '35.2' 'not assigned.unknown' 'niben101scf32453_40105-45387' '(at3g45900 : 333.0) Ribonuclease P protein subunit P38-related; BEST Arabidopsis thaliana protein match is: Ribonuclease P protein subunit P38-related (TAIR:AT5G53020.1); Has 1049 Blast hits to 987 proteins in 199 species: Archae - 26; Bacteria - 115; Metazoa - 530; Fungi - 58; Plants - 90; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (reliability: 666.0) & (original description: Putative BnaC03g55660D, Description = BnaC03g55660D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf32526_25747-59452' '(at5g23390 : 624.0) Plant protein of unknown function (DUF639); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF639 (InterPro:IPR006927); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF639) (TAIR:AT1G48840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68417 : 550.0) no description available & (reliability: 1248.0) & (original description: Putative BnaA01g26800D, Description = BnaA01g26800D protein, PFAM = PF04842)' T '35.2' 'not assigned.unknown' 'niben101scf32746_34298-44521' '(at5g44010 : 219.0) unknown protein; Has 28 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 438.0) & (original description: Putative , Description = , PFAM = PF11107)' T '35.2' 'not assigned.unknown' 'niben101scf32747_101912-105195' ' no hits & (original description: Putative ERN1, Description = Ethylene-responsive nuclear protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf32795_1-611' ' no hits & (original description: Putative , Description = , PFAM = PF04434)' T '35.2' 'not assigned.unknown' 'niben101scf33214_72248-74439' ' no hits & (original description: Putative PGSC0003DMG400028757, Description = AT4g30010/F6G3_40, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf33299_9951-14347' '(at2g26070 : 293.0) Encodes a predicted membrane protein. Similar sequences are widely distributed and conserved in plants, animals and protists but absent in fungi and prokaryotes. The sequence has no known motifs and no biological function has been assigned in any species. In Arabidopsis, it appears to be involved in the negative regulation of the response to ethylene, is localized to the Golgi and is a positive regulator of ETR1.; REVERSION-TO-ETHYLENE SENSITIVITY1 (RTE1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF778 (InterPro:IPR008496); BEST Arabidopsis thaliana protein match is: RTE1-homolog (TAIR:AT3G51040.3); Has 292 Blast hits to 292 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (gnl|cdd|69146 : 229.0) no description available & (gnl|cdd|38360 : 217.0) no description available & (reliability: 586.0) & (original description: Putative RTE1, Description = Protein REVERSION-TO-ETHYLENE SENSITIVITY1, PFAM = PF05608;PF05608)' T '35.2' 'not assigned.unknown' 'niben101scf33318_8168-10587' ' no hits & (original description: Putative , Description = , PFAM = PF05340)' T '35.2' 'not assigned.unknown' 'niben101scf33318_27156-29566' ' no hits & (original description: Putative , Description = , PFAM = PF05340)' T '35.2' 'not assigned.unknown' 'niben101scf33342_14691-19823' '(at2g12400 : 564.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25270.1); Has 177 Blast hits to 172 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 1128.0) & (original description: Putative BnaC09g08450D, Description = BnaC09g08450D protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf33567_2947-8325' '(at5g11390 : 252.0) Encodes one of the WPP domain-interacting proteins (WIT1/AT5G11390, WIT2/AT1G68910) required for RanGAP nuclear envelope association in root tip cells. Ran GTPase plays essential roles in multiple cellular processes, including nucleocytoplasmic transport, spindle formation, and postmitotic nuclear envelope reassembly. The cytoplasmic Ran GTPase activating protein RanGAP is critical to establish a functional RanGTP/RanGDP gradient across the nuclear envelope and is associated with the outer surface of the nuclear envelope in metazoan and higher plant cells. Arabidopsis thaliana RanGAP association with the root tip nuclear envelope requires a family of likely plant-specific nucleoporins combining coiled-coil and transmembrane domains (CC-TMD) and WPP domain-interacting proteins (WIPs). WIT1 and WIT2 have been identified as a second family of CC-TMD proteins, structurally similar, yet clearly distinct from the WIP family, that is required for RanGAP nuclear envelop association in root tip cells.; WPP domain-interacting protein 1 (WIT1); BEST Arabidopsis thaliana protein match is: WPP domain-interacting protein 2 (TAIR:AT1G68910.1); Has 69833 Blast hits to 39390 proteins in 2372 species: Archae - 1132; Bacteria - 10633; Metazoa - 34082; Fungi - 6202; Plants - 3742; Viruses - 161; Other Eukaryotes - 13881 (source: NCBI BLink). & (reliability: 504.0) & (original description: Putative WIT2, Description = WPP domain interacting tail-anchored protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf33567_59225-65532' '(at5g49550 : 138.0) Putative homolog of mammalian BLOC-1 Subunit 2. Protein - protein interaction with BLOS1.; CONTAINS InterPro DOMAIN/s: Biogenesis of lysosome-related organelles complex-1, subunit 2 (InterPro:IPR019269); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 276.0) & (original description: Putative BLOS2, Description = Biogenesis of lysosome-related organelles complex 1 subunit 2, PFAM = PF10046)' T '35.2' 'not assigned.unknown' 'niben101scf33628_8851-22492' '(at5g48520 : 823.0) unknown protein; Has 609 Blast hits to 593 proteins in 129 species: Archae - 0; Bacteria - 41; Metazoa - 390; Fungi - 40; Plants - 64; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 1646.0) & (original description: Putative 37834, Description = AUGMIN subunit 3, PFAM = PF14932)' T '35.2' 'not assigned.unknown' 'niben101scf33827_885-11850' '(at5g39940 : 542.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like (InterPro:IPR004792). & (gnl|cdd|67123 : 366.0) no description available & (reliability: 1084.0) & (original description: Putative yhiN, Description = Putative oxidoreductase with FAD/NAD(P)-binding domain YhiN, PFAM = PF03486)' T '35.2' 'not assigned.unknown' 'niben101scf33912_1-2097' ' no hits & (original description: Putative Os10g0161400, Description = Putative disease resistance protein RGA1, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf33912_1759-6182' '(at2g41810 : 488.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF642 (TAIR:AT2G41800.1); Has 306 Blast hits to 298 proteins in 21 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 302; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|68437 : 457.0) no description available & (reliability: 976.0) & (original description: Putative At2g41810, Description = Putative uncharacterized protein At2g41810, PFAM = PF04862;PF04862)' T '35.2' 'not assigned.unknown' 'niben101scf34361_49097-59055' '(at4g20060 : 577.0) EMBRYO DEFECTIVE 1895 (EMB1895); FUNCTIONS IN: binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 205 Blast hits to 155 proteins in 64 species: Archae - 0; Bacteria - 0; Metazoa - 163; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (gnl|cdd|37199 : 292.0) no description available & (reliability: 1154.0) & (original description: Putative PGSC0003DMG400003329, Description = CM0545.590.nc protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf34675_7230-11371' '(at2g14830 : 186.0) Regulator of Vps4 activity in the MVB pathway protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Zinc finger, UBP-type (InterPro:IPR001607), Histone deacetylase superfamily (InterPro:IPR000286); Has 863 Blast hits to 862 proteins in 184 species: Archae - 0; Bacteria - 6; Metazoa - 544; Fungi - 131; Plants - 94; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (gnl|cdd|37238 : 162.0) no description available & (gnl|cdd|67036 : 125.0) no description available & (reliability: 372.0) & (original description: Putative PGSC0003DMG400007812, Description = Regulator of Vps4 activity in the MVB pathway protein, PFAM = PF03398)' T '35.2' 'not assigned.unknown' 'niben101scf34696_6337-10256' '(at4g18230 : 283.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharide biosynthesis protein Alg14 like (InterPro:IPR013969); Has 640 Blast hits to 640 proteins in 277 species: Archae - 4; Bacteria - 281; Metazoa - 94; Fungi - 127; Plants - 57; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (gnl|cdd|38549 : 219.0) no description available & (gnl|cdd|87589 : 216.0) no description available & (reliability: 566.0) & (original description: Putative Alg14, Description = UDP-N-acetylglucosamine transferase subunit ALG14 homolog, PFAM = PF08660)' T '35.2' 'not assigned.unknown' 'niben101scf34724_77662-80686' '(at2g28690 : 167.0) Protein of unknown function (DUF1635); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1635 (InterPro:IPR012862); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1635) (TAIR:AT5G59760.1); Has 114 Blast hits to 114 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (gnl|cdd|71235 : 147.0) no description available & (reliability: 334.0) & (original description: Putative At2g28690, Description = Putative uncharacterized protein At2g28690/T8O18.2, PFAM = PF07795)' T '35.2' 'not assigned.unknown' 'niben101scf34798_5187-14565' '(at4g01995 : 243.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative , Description = , PFAM = PF13225)' T '35.2' 'not assigned.unknown' 'niben101scf35301_72811-74367' ' (original description: Putative ltp, Description = Non-specific lipid-transfer protein, PFAM = PF00234)' T '35.2' 'not assigned.unknown' 'niben101scf35933_4832-7275' ' no hits & (original description: Putative , Description = , PFAM = PF17181)' T '35.2' 'not assigned.unknown' 'niben101scf36162_12651-15753' '(at4g16580 : 368.0) Protein phosphatase 2C family protein; FUNCTIONS IN: phosphoprotein phosphatase activity, catalytic activity; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Sporulation stage II, protein E C-terminal (InterPro:IPR010822); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66720.1); Has 838 Blast hits to 828 proteins in 210 species: Archae - 0; Bacteria - 2; Metazoa - 184; Fungi - 235; Plants - 232; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (gnl|cdd|36593 : 281.0) no description available & (reliability: 736.0) & (original description: Putative At5g66720, Description = Probable protein phosphatase 2C 80, PFAM = PF07228)' T '35.2' 'not assigned.unknown' 'niben101scf36271_24100-27362' '(at2g17695 : 298.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960). & (gnl|cdd|87893 : 146.0) no description available & (reliability: 596.0) & (original description: Putative At2g17695, Description = UPF0548 protein At2g17695, PFAM = PF09348)' T '35.2' 'not assigned.unknown' 'niben101scf36335_78856-83297' '(at2g30900 : 399.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 43 (TBL43); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 42 (TAIR:AT1G78710.1); Has 1340 Blast hits to 1315 proteins in 29 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 1338; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (gnl|cdd|72785 : 153.0) no description available & (reliability: 798.0) & (original description: Putative TBL43, Description = Protein trichome birefringence-like 43, PFAM = PF14416;PF13839)' T '35.2' 'not assigned.unknown' 'niben101scf36478_5572-8384' '(at4g35690 : 132.0) Arabidopsis protein of unknown function (DUF241); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT4G35710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|66742 : 112.0) no description available & (reliability: 264.0) & (original description: Putative PGSC0003DMG400001539, Description = DUF241 domain protein, PFAM = PF03087)' T '35.2' 'not assigned.unknown' 'niben101scf37250_66201-70104' '(at3g23160 : 533.0) Protein of unknown function (DUF668); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700), Protein of unknown function DUF3475 (InterPro:IPR021864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT5G04550.1); Has 431 Blast hits to 290 proteins in 19 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 424; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (gnl|cdd|68572 : 130.0) no description available & (reliability: 1066.0) & (original description: Putative BnaAnng08110D, Description = BnaAnng08110D protein, PFAM = PF11961;PF05003)' T '35.2' 'not assigned.unknown' 'niben101scf37365_12012-14884' '(at1g49470 : 248.0) Family of unknown function (DUF716) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF716) (TAIR:AT1G55230.1); Has 395 Blast hits to 395 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 157; Fungi - 0; Plants - 236; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (gnl|cdd|68394 : 99.6) no description available & (reliability: 496.0) & (original description: Putative BnaA08g02670D, Description = BnaA08g02670D protein, PFAM = PF04819)' T '35.2' 'not assigned.unknown' 'niben101scf37767_7258-11781' '(at3g04620 : 142.0) Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein (InterPro:IPR002775), Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related (InterPro:IPR014560); BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein (TAIR:AT1G29250.1); Has 160 Blast hits to 160 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 284.0) & (original description: Putative nab, Description = Nuclear acid binding protein, PFAM = PF01918)' T '35.2' 'not assigned.unknown' 'niben101scf37767_39038-44558' ' no hits & (original description: Putative , Description = , PFAM = PF09425)' T '35.2' 'not assigned.unknown' 'niben101scf37888_122194-129171' '(at3g62370 : 441.0) heme binding; FUNCTIONS IN: heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c-552/DMSO reductase-like, haem-binding domain (InterPro:IPR019020); Has 36 Blast hits to 36 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 882.0) & (original description: Putative Sb01g037350, Description = Putative uncharacterized protein Sb01g037350, PFAM = PF09459)' T '35.2' 'not assigned.unknown' 'niben101scf37900_27686-34563' '(at5g03345 : 155.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Magnesium transporter (InterPro:IPR018937); Has 155 Blast hits to 155 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 105; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 310.0) & (original description: Putative At5g03345, Description = Membrane magnesium transporter, PFAM = PF10270)' T '35.2' 'not assigned.unknown' 'niben101scf37900_36476-39415' '(at4g34340 : 252.0) TBP-associated factor 8 (TAF8); FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone-fold (InterPro:IPR009072), Bromodomain transcription factor (InterPro:IPR006565), Transcription factor TFIID, subunit 8, C-terminal (InterPro:IPR019473); BEST Arabidopsis thaliana protein match is: Bromodomain transcription factor (TAIR:AT5G15570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37600 : 200.0) no description available & (gnl|cdd|47875 : 94.1) no description available & (reliability: 504.0) & (original description: Putative TAF8, Description = Transcription initiation factor TFIID subunit 8, PFAM = PF07524;PF10406)' T '35.2' 'not assigned.unknown' 'niben101scf37900_39234-46455' '(at3g09860 : 134.0) unknown protein; Has 34 Blast hits to 34 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 268.0) & (original description: Putative F8A24.9, Description = Putative aminopeptidase-like protein AC3.5-like, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf37900_59291-61635' ' no hits & (original description: Putative PGSC0003DMG400003884, Description = SAUR-like auxin-responsive protein family, putative, PFAM = PF02519)' T '35.2' 'not assigned.unknown' 'niben101scf38001_52219-55510' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf38030_2616-5966' '(at5g02710 : 183.0) unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0153 (InterPro:IPR005358); Has 240 Blast hits to 240 proteins in 73 species: Archae - 10; Bacteria - 110; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (reliability: 366.0) & (original description: Putative , Description = Flagellin N-methylase, PFAM = PF03692)' T '35.2' 'not assigned.unknown' 'niben101scf38184_12947-15477' ' (original description: Putative PGSC0003DMG400009677, Description = , PFAM = PF04043)' T '35.2' 'not assigned.unknown' 'niben101scf38186_5196-9082' '(at5g19630 : 243.0) alpha/beta-Hydrolases superfamily protein; Has 1062 Blast hits to 1062 proteins in 417 species: Archae - 16; Bacteria - 763; Metazoa - 1; Fungi - 28; Plants - 66; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). & (reliability: 486.0) & (original description: Putative At5g19630, Description = Alpha/beta-Hydrolases superfamily protein, PFAM = PF02129)' T '35.2' 'not assigned.unknown' 'niben101scf38401_17509-21583' '(at3g13780 : 139.0) SMAD/FHA domain-containing protein ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984); Has 13742 Blast hits to 8952 proteins in 462 species: Archae - 7; Bacteria - 1954; Metazoa - 5288; Fungi - 1773; Plants - 718; Viruses - 188; Other Eukaryotes - 3814 (source: NCBI BLink). & (reliability: 278.0) & (original description: Putative At3g13780, Description = SMAD/FHA domain-containing protein, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf38595_35302-37724' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf38709_6097-9467' ' no hits & (original description: Putative , Description = , PFAM = PF02298)' T '35.2' 'not assigned.unknown' 'niben101scf39220_64235-68453' ' no hits & (original description: Putative , Description = , PFAM = PF05904)' T '35.2' 'not assigned.unknown' 'niben101scf39265_9945-12902' '(at5g03050 : 89.4) unknown protein; Has 33 Blast hits to 33 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 178.8) & (original description: Putative KNB36, Description = Knotted 1-binding protein 36, PFAM = )' T '35.2' 'not assigned.unknown' 'niben101scf39404_1-1277' ' no hits & (original description: Putative , Description = Putative ovule protein, PFAM = PF03004)' T '35.2' 'not assigned.unknown' 'niben101scf39409_1743-4138' ' no hits & (original description: Putative)' T '35.2' 'not assigned.unknown' 'niben101scf39409_5015-8046' ' no hits & (original description: Putative , Description = , PFAM = PF02362)' T '35.2' 'not assigned.unknown' 'niben101scf39473_11891-16944' ' no hits & (original description: Putative , Description = S-norcoclaurine synthase, PFAM = PF00407)' T '35.2' 'not assigned.unknown' 'niben101scf39473_25493-28608' ' no hits & (original description: Putative PGSC0003DMG400003399, Description = , PFAM = PF00407)' T '35.2' 'not assigned.unknown' 'niben101scf39477_1-1968' '(at3g48660 : 91.3) Protein of unknown function (DUF 3339); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3339 (InterPro:IPR021775); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF 3339) (TAIR:AT5G63500.1); Has 274 Blast hits to 269 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 274; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 182.6) & (original description: Putative BnaA08g06830D, Description = BnaA06g16390D protein, PFAM = PF11820)' T '35.2' 'not assigned.unknown' 'niben101scf39499_6801-11213' '(at1g08440 : 454.0) Aluminium activated malate transporter family protein; INVOLVED IN: response to aluminum ion; CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: aluminum-activated malate transporter 1 (TAIR:AT1G08430.1); Has 610 Blast hits to 608 proteins in 146 species: Archae - 0; Bacteria - 224; Metazoa - 0; Fungi - 10; Plants - 352; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (gnl|cdd|39909 : 385.0) no description available & (gnl|cdd|85194 : 177.0) no description available & (reliability: 908.0) & (original description: Putative ALMT7, Description = Aluminum-activated malate transporter 7, PFAM = PF11744)' T '35.2' 'not assigned.unknown' 'niben101scf39528_256-4788' '(at5g59830 : 343.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13660.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 686.0) & (original description: Putative MTR_4g063150, Description = DNA-binding protein, putative, PFAM = PF16135)' T '35.2.1001' 'not assigned.unknown' 'unknown001' 'UnknownCompound' M '35.3' 'not assigned.disagreeing hits' '' '' '991' 'Mineral Nutrition' '' '' '991.1' 'Mineral Nutrition.phosphate' '' '' '991.1.1001' 'Mineral Nutrition.phosphate' 'phosphate' 'Mineral Nutrition' M